# ORIGINAL: g587.t1 original gene structure, not modified by PASA NODE_1579_length_10372_cov_37.9085 AUGUSTUS gene 374 1496 . + . ID=g587;Name=g587.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS mRNA 374 1496 . + . ID=g587.t1;Parent=g587;Name=g587.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 374 1044 . + . ID=g587.t1.exon1;Parent=g587.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 374 1044 . + 0 ID=cds.g587.t1;Parent=g587.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 1241 1496 . + . ID=g587.t1.exon2;Parent=g587.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 1241 1496 . + 1 ID=cds.g587.t1;Parent=g587.t1 #PROT g587.t1 g587 MAGRGSKGTTAKAGKSAKPQSTNKRETRDADSEGLEEGQGSESGFNKFPRTYHILNSGGSAVSRDDLVMGDVDVVAFLNPSHDNVISIEEKVDGANLGISIDASGRILTQNRSHYVNSQTHRQFSALDAWISEHEESLRSILRPGSGDTLFGEWLFAVHSIRYTRLPSYFLAFDIFDGSACRFISSESRNTKLRGTGIRTVRTIARYSDAPTTKEGLLALLETRSAYYDGAVEGVYIRLDERTQNAIPTATDSPSTATSTTYHSARSKLVRPDFMQAIDEHWTKKDFTKNILDMNAAYSQYDEEDNYG* # PASA_UPDATE: g588.t1, single gene model update, valid-1, status:[pasa:asmbl_2026,status:3], valid-1 NODE_1579_length_10372_cov_37.9085 . gene 1797 6381 . - . ID=g588;Name=g588.t1 NODE_1579_length_10372_cov_37.9085 . mRNA 1797 6381 . - . ID=g588.t1;Parent=g588;Name=g588.t1 NODE_1579_length_10372_cov_37.9085 . five_prime_UTR 6232 6381 . - . ID=g588.t1.utr5p1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 6163 6381 . - . ID=g588.t1.exon1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 6163 6231 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 5953 6003 . - . ID=g588.t1.exon2;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 5953 6003 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 5472 5534 . - . ID=g588.t1.exon3;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 5472 5534 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 4947 5363 . - . ID=g588.t1.exon4;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 4947 5363 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 4746 4802 . - . ID=g588.t1.exon5;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 4746 4802 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 4457 4519 . - . ID=g588.t1.exon6;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 4457 4519 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 4081 4184 . - . ID=g588.t1.exon7;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 4081 4184 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 3529 3787 . - . ID=g588.t1.exon8;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 3529 3787 . - 1 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 3225 3275 . - . ID=g588.t1.exon9;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 3225 3275 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 2977 3039 . - . ID=g588.t1.exon10;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 2977 3039 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 2308 2646 . - . ID=g588.t1.exon11;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 2308 2646 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . exon 1797 2022 . - . ID=g588.t1.exon12;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . CDS 1966 2022 . - 0 ID=cds.g588.t1;Parent=g588.t1 NODE_1579_length_10372_cov_37.9085 . three_prime_UTR 1797 1965 . - . ID=g588.t1.utr3p1;Parent=g588.t1 #PROT g588.t1 g588 MADAAAPAPAPAPAATPAQASAEPALVLAGYLTKQGGAVKSWKKRYFTLKGTKLQYFKSAKDATELGVIDLSECDKLVESTVKPHGFEVHTPNRIFRVVADTNDDKEAWVLVIKPRIGTNRVSKDGDSSDEDEHEKFGEPMEIIQPPEGYADEARQSLSAAAVEPPAVAAVSAPADAATPAATSDAPSAVAEAPAAAPAEPVAKPTISGYLTKQGGAHKNWKRRYFALTGNELKYFKSEKDKNHLGFVDVSKSTAVLPAEVKGLDRTIAIVTPSRTYLFSAPSDTDYQAWLGALQPLVPVSVDDGAESDDETLDTKAEDAVTPSADDATTSKPANPDAPKAEETKADDGAATVSPGDVVAKADVIRQGFLTKQGGKQKTWKRRFFVLRGSDLQYFKNDKEKEAIGTIDLTKCSGISKIAAKGAKPNSFAIATPTRTYIIAAASSDEMEEWVHVLEDVVPEVDADGTDAADVAAEGGSTTAIDDKLDEMKRKLEVVTKEKEQLEAEKAEIEKKLKDAEAKLADLEKRFGSN* # ORIGINAL: g589.t1 original gene structure, not modified by PASA NODE_1579_length_10372_cov_37.9085 AUGUSTUS gene 7018 10196 . + . ID=g589;Name=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS mRNA 7018 10196 . + . ID=g589.t1;Parent=g589;Name=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 7018 7119 . + . ID=g589.t1.exon1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 7018 7119 . + 0 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 7345 7653 . + . ID=g589.t1.exon2;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 7345 7653 . + 0 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 8101 8256 . + . ID=g589.t1.exon3;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 8101 8256 . + 0 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 8614 8712 . + . ID=g589.t1.exon4;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 8614 8712 . + 0 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 8861 8946 . + . ID=g589.t1.exon5;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 8861 8946 . + 0 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 9194 9269 . + . ID=g589.t1.exon6;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 9194 9269 . + 1 ID=cds.g589.t1;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS exon 9576 10196 . + . ID=g589.t1.exon7;Parent=g589.t1 NODE_1579_length_10372_cov_37.9085 AUGUSTUS CDS 9576 10196 . + 0 ID=cds.g589.t1;Parent=g589.t1 #PROT g589.t1 g589 MANPVGFVPIQNAAVDDEDDGTGSYEEEEDDDYEEEEGDEDGDDTDDEEDDESEEEEEEPKLKYQRMSLNDILGKDSARCVAVSDKFLALGTEFGMVYMLDLTGNMTKRFSLHVKAVNDLSIDANGDFVASCSDDGKVVISSLFSAEQAVQNDYQRPITAVALDPEYSRKKRRQFVAGAPSGQLVLTEKKWLNNKVTVLHAAEGPIYAVKWRSSYIAWANSQGVKVYDCNLNQRIAWIGLPKGSPKPDLYRCHLAWKDDQTLIIGWGDSVQIGVIKETGKDRRTLEASPSGGKPSSSPSTPSTAPANATNANAASGGAPSSLQPTRAPQTALPRKVEITTQFQTDFIVAGIAPYGNELAMLAYVRNEDDHAPSSEAAAAPGAQRPELRILTAQNEEISTDSLTINGFEHNNSNSYSLVFLESPIENDRLFYIVSPKDIIIARPRDLDDHVAWLLEHERYEVRRDALFVSSLSCLLLCWSLSA* # ORIGINAL: g2758.t1 original gene structure, not modified by PASA NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS gene 9 484 . - . ID=g2758;Name=g2758.t1 NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS mRNA 9 484 . - . ID=g2758.t1;Parent=g2758;Name=g2758.t1 NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS exon 431 484 . - . ID=g2758.t1.exon1;Parent=g2758.t1 NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS CDS 431 484 . - 0 ID=cds.g2758.t1;Parent=g2758.t1 NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS exon 9 287 . - . ID=g2758.t1.exon2;Parent=g2758.t1 NODE_6783_length_511_cov_51.25_potentialcontaminant AUGUSTUS CDS 9 287 . - 0 ID=cds.g2758.t1;Parent=g2758.t1 #PROT g2758.t1 g2758 MNWLIDFKDLIFEKEIGQGSFGKVFVGQLRGSTVAIKVIRDGQVVIQESAQTSVRSGFTNSIMQSTSAGEEKVGRQSLVYSTFREDIASIARKPSKEDLSSYRAAVTAFIQ # ORIGINAL: g13548.t1 original gene structure, not modified by PASA NODE_1096_length_14023_cov_41.4306 AUGUSTUS gene 10646 11281 . - . ID=g13548;Name=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS mRNA 10646 11281 . - . ID=g13548.t1;Parent=g13548;Name=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 11090 11281 . - . ID=g13548.t1.exon1;Parent=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 11090 11281 . - 0 ID=cds.g13548.t1;Parent=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 10832 10976 . - . ID=g13548.t1.exon2;Parent=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 10832 10976 . - 0 ID=cds.g13548.t1;Parent=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 10646 10713 . - . ID=g13548.t1.exon3;Parent=g13548.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 10646 10713 . - 2 ID=cds.g13548.t1;Parent=g13548.t1 #PROT g13548.t1 g13548 MSQDDRASKFHEDALAGKTKKTVGDIATLRKFMFRNQDYRFTEGSKTKLFQSIQLYCKMFEGSNEDDNPSVELLEDALKMPFTVFTTKQKSSMLKWLEAAKDGKQLNAATAPVSKKGRKPWEQEDEDDDEDYEQ* # ORIGINAL: g13547.t1 original gene structure, not modified by PASA NODE_1096_length_14023_cov_41.4306 AUGUSTUS gene 5302 10157 . - . ID=g13547;Name=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS mRNA 5302 10157 . - . ID=g13547.t1;Parent=g13547;Name=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 10074 10157 . - . ID=g13547.t1.exon1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 10074 10157 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 9779 9815 . - . ID=g13547.t1.exon2;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 9779 9815 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 9547 9600 . - . ID=g13547.t1.exon3;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 9547 9600 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 9310 9389 . - . ID=g13547.t1.exon4;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 9310 9389 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 9079 9171 . - . ID=g13547.t1.exon5;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 9079 9171 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 8701 8781 . - . ID=g13547.t1.exon6;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 8701 8781 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 8496 8538 . - . ID=g13547.t1.exon7;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 8496 8538 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 8169 8324 . - . ID=g13547.t1.exon8;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 8169 8324 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 7846 8001 . - . ID=g13547.t1.exon9;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 7846 8001 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 7520 7663 . - . ID=g13547.t1.exon10;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 7520 7663 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 7247 7411 . - . ID=g13547.t1.exon11;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 7247 7411 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 6952 7107 . - . ID=g13547.t1.exon12;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 6952 7107 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 6503 6685 . - . ID=g13547.t1.exon13;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 6503 6685 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 6159 6315 . - . ID=g13547.t1.exon14;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 6159 6315 . - 2 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 5757 5832 . - . ID=g13547.t1.exon15;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 5757 5832 . - 1 ID=cds.g13547.t1;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 5302 5439 . - . ID=g13547.t1.exon16;Parent=g13547.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 5302 5439 . - 0 ID=cds.g13547.t1;Parent=g13547.t1 #PROT g13547.t1 g13547 MADAPVIPLIDALRELVGGSTLLKAGRQGKPHFRRFRLSADLMRLEWESPNKNTGESAVSISEITEVIKGQKSKVFQYNRIPEKEALSFSVMYQNRSLDLICKDKREFEAWTVGLQALLNGEGSKINRAELGAVQSQSADKIQAVMEGGAFKLVINEDASDLYTWGDGDRGKLGHGEEDCEFQPRVVEALLGRDVKMLALGTQHSIALTDTGEVYSWGCGLFGRTGHGRERHRFTPLKVATLRGHDVVSIAAGDSHSAAVLDNGELYTWGRGDDGRLGYECNKQTTPRIVDSLQGKKAIAVACGFAHTLVLVEGGEVYAFGANERGQLGSGDRQPSILPVLVGGMKEHRIARIASGPLHCAATSDVGRLLTWGHGMHGRLGHGDEDDKLTATVVQELTRFEVTDIACGHTHTAALTSLRSVYTWGDGSLGQLGLGESPTSVVKTLPYPVSITTTATTADGTHVAQVGCGADYTAVLMENGHIFVWGCGDHGRLGVGDVRDRFSPAPIESMGEKKCRGIACGASHAAAMVLHGWVPDEEAKDCMACKLQFTTFRRRHHCRKCGGVFCGSCTTKKYPLLEAGFVEPVRVCDKCYSILSTRDS* # ORIGINAL: g13549.t1 original gene structure, not modified by PASA NODE_1096_length_14023_cov_41.4306 AUGUSTUS gene 12642 13962 . + . ID=g13549;Name=g13549.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS mRNA 12642 13962 . + . ID=g13549.t1;Parent=g13549;Name=g13549.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 12642 12672 . + . ID=g13549.t1.exon1;Parent=g13549.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 12642 12672 . + 0 ID=cds.g13549.t1;Parent=g13549.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 12956 13962 . + . ID=g13549.t1.exon2;Parent=g13549.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 12956 13962 . + 2 ID=cds.g13549.t1;Parent=g13549.t1 #PROT g13549.t1 g13549 MTRSFSPDSIAKSNLDAHHRRDENRYDNNQRSRRSSSLGSSSSRSSTASSGSTSSSLTSSSTSSRDSSAMQRERPLSNEKSSREHEHVHVHPQQVHDSVARAEDEDHDFRLEHLEIDSTHEGSVSPKRDGRTRIVVGRLNIPTTRTEAYFAWIDKVHEREERERRRRAAEIEAKEMTANAERETRQRSKAVYERKAEQRRQREQARVEAEARAEEEKRAKKAAFLEAAPARIEEWLRKKEEDRVAQIEAHERAAAEAEEKERRKQVLQRGKAEIAYTKWLHEAHLREVKNRDTSPFVVAEPWQFDVPEQTIIRRGRNGKKRRAKVVVLPPSPPHLFRAMKAEGRA* # ORIGINAL: g13546.t1 original gene structure, not modified by PASA NODE_1096_length_14023_cov_41.4306 AUGUSTUS gene 1260 4366 . + . ID=g13546;Name=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS mRNA 1260 4366 . + . ID=g13546.t1;Parent=g13546;Name=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 1260 1427 . + . ID=g13546.t1.exon1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 1260 1427 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 1829 2011 . + . ID=g13546.t1.exon2;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 1829 2011 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 2237 2515 . + . ID=g13546.t1.exon3;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 2237 2515 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 2726 3400 . + . ID=g13546.t1.exon4;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 2726 3400 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 3536 3655 . + . ID=g13546.t1.exon5;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 3536 3655 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS exon 3839 4366 . + . ID=g13546.t1.exon6;Parent=g13546.t1 NODE_1096_length_14023_cov_41.4306 AUGUSTUS CDS 3839 4366 . + 0 ID=cds.g13546.t1;Parent=g13546.t1 #PROT g13546.t1 g13546 MSGYGGDLARFLVPDASQLEDADSSRLMHNKSMDMSMHFAYCSPESLAECTSYIVKVVEHDAHKLRLEIERTENALRRERERTEALEREIAACLSRETQLADRVKKIAVQASTEKEEFAKSKAALLSKATQYQHELKRKEKEYTKLQEHLSNAVRARGTGTGAGATKVTSIDISAPLTRGATGKASQRQTWKPANSQDEQMFAAISNNYETRQNALLAENSQLRQCLATMDGELSSVVAIVTASVGLLGDEPSADASGDSGHAGDGEESADHVPHPPSMAEMIAAASAPSPASRFEMPFDSVRECIEADMRARMNVLRAHYEASQQRLAEKRDSAVTFESGQHNGDDSRAAAIGGEQPVLSGWEAMGAGGGASDMRLRELEDELDACRRVMEEQERLLRDNLDGFHASETPRRNRHAPERAYLDDSRLFVEADKLERERAMFEKAKATFEKQRKEVTDAAIQLGRERVLLQRQKDAMEEERGVFLRMQQRFLSIQPKTSPSRASPVRLSANMHDPTVGKQRSLSLSSPIPSPVRVGVVAPESPSDHSGVESPFVEEAIESPAFRSSTPAFSPAPNRVARPLAYANAINAVSFSEAVAVSTASKARTGNGPSRYVKFDLGGESIVHPGEDSLPSPIVRESRRLSFGDNEHK* # PASA_UPDATE: g10141.t1, single gene model update, valid-1, status:[pasa:asmbl_8671,status:12], valid-1 NODE_647_length_19635_cov_41.7461 . gene 17207 19528 . - . ID=g10141;Name=g10141.t1 NODE_647_length_19635_cov_41.7461 . mRNA 17207 19528 . - . ID=g10141.t1;Parent=g10141;Name=g10141.t1 NODE_647_length_19635_cov_41.7461 . five_prime_UTR 19423 19528 . - . ID=g10141.t1.utr5p1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . exon 19274 19528 . - . ID=g10141.t1.exon1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . CDS 19274 19422 . - 0 ID=cds.g10141.t1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . exon 18800 18932 . - . ID=g10141.t1.exon2;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . CDS 18800 18932 . - 1 ID=cds.g10141.t1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . exon 18298 18413 . - . ID=g10141.t1.exon3;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . CDS 18298 18413 . - 0 ID=cds.g10141.t1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . exon 17974 18109 . - . ID=g10141.t1.exon4;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . CDS 17974 18109 . - 1 ID=cds.g10141.t1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . exon 17207 17741 . - . ID=g10141.t1.exon5;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . CDS 17532 17741 . - 0 ID=cds.g10141.t1;Parent=g10141.t1 NODE_647_length_19635_cov_41.7461 . three_prime_UTR 17207 17531 . - . ID=g10141.t1.utr3p1;Parent=g10141.t1 #PROT g10141.t1 g10141 MDDPEWGGKGNFDLSEEIRLSEIAVQHINALQPKFAIVCGDLVHAYPGTRNYDVEVETFKRVFSGLDASVPLVCVCGNHDVNDSGKAPTVNTINEYTDRFGDDFFEFWAGGVCFIVLNSNVIKDPSAALDHYNLQEQWLKDTLQRARDLDAAHIVAFMHHPVFLKSPDEEDEYFNLPKERREPLLRQLEAAGVRAVFCGHYHRNTEGKSGNMDVVCLHVCVCECVCCVFSRFITLSTLYRGKELRHQ* # ORIGINAL: g10138.t1 original gene structure, not modified by PASA NODE_647_length_19635_cov_41.7461 AUGUSTUS gene 12091 12909 . + . ID=g10138;Name=g10138.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS mRNA 12091 12909 . + . ID=g10138.t1;Parent=g10138;Name=g10138.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 12091 12909 . + . ID=g10138.t1.exon1;Parent=g10138.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 12091 12909 . + 0 ID=cds.g10138.t1;Parent=g10138.t1 #PROT g10138.t1 g10138 MANYVLKTGEEGRERLSLVNVAFGGATSRFFDEILGVRAGMTVADVGCGAGTVSVMLAKRVGPSGIVHAIDASPGQVEVARELAEREGLTNIRFHCAGANSIGCLIDESCDVVFCRFVLVHLEDPLGALREMNRVVKVGGFVAAEEPDITSFSRFSEPEHPSFTRYIELLYDACERQKQNPRIGRRLLRTFREAGLTASNAKFECSTLMGVAKRMVALTIVELADGIVDAGLETKDSLGKIISNLYSLADDDTYIFGFITCQAWCQKVERAN* # ORIGINAL: g10139.t1 original gene structure, not modified by PASA NODE_647_length_19635_cov_41.7461 AUGUSTUS gene 14181 15977 . + . ID=g10139;Name=g10139.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS mRNA 14181 15977 . + . ID=g10139.t1;Parent=g10139;Name=g10139.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 14181 15977 . + . ID=g10139.t1.exon1;Parent=g10139.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 14181 15977 . + 0 ID=cds.g10139.t1;Parent=g10139.t1 #PROT g10139.t1 g10139 MTHMLRAAVARATRYIPSSVHASTAASRTGNTVSISAPRRNLHERVNTPRGDEPHRSAPAVQHVQPENLLLIRSSGNSVHVAWQMHRSVSSLFGAGVQRSRIPQWASRIVQQVHHQSSLAGAAALVDTQTDENSANIYEFPDIMRKSRANELPRVQHGVHRSFLFTPSTPSAIDKAVDSGADAIVIDMEDAIAYPLKAETRIRAASQLKRLYLDAINGRPLPLICVRVNCLDDMHELREDLRILVAELPAGAIHGLVIPKVRNVDDMREFEDLVCDAEQAAGFPEDRWLRLFPIIETAAGLNNAPAIAATTKRNAGLVLGHADLTTDLHSTPSEKTLLHPRGIVVAAARAAGIMPIDTPSFAIHDHIAMEKDCHTARSLGFDGKILVHHSTVPIAHLSFMPPMQEIKWAESVLSSFGTNAAPGRVRRGAEGLSSAGSLTQPPTAMPSAKLIDGALVGPPMLEKARTIMARARPVPLRGIHHRIPDNDELATLQVANEDDARSSSPSFHVGSGVGASSSLMPTYGLDLERIYPGQIIESPLEITLTESLKTAWQSSFFEPGRMFTSDEWDGKGAGTCAGKPNAMDNPSHVGNNNERCQL* # ORIGINAL: g10137.t1 original gene structure, not modified by PASA NODE_647_length_19635_cov_41.7461 AUGUSTUS gene 9333 11303 . - . ID=g10137;Name=g10137.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS mRNA 9333 11303 . - . ID=g10137.t1;Parent=g10137;Name=g10137.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 9333 11303 . - . ID=g10137.t1.exon1;Parent=g10137.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 9333 11303 . - 0 ID=cds.g10137.t1;Parent=g10137.t1 #PROT g10137.t1 g10137 MQSRGRDSSESGERQPLLSARHGSAAVDIVQNYSQPHLAPAGAQSTLTRSFAAGVGKLPLSEADIGGSADWTTVGSNIQAPFQHEGESCDSSNFAGKLNGFDDAQPLLGASRGGDKPSVHYVALSIAIGLGVFLSGLDVSIVQVALISIGKDLGAAKTATEWVLLAYMTTYAALLPTSGKLGDRYSKKTVFVAGMAVFGVSSIVCAVSPMIAVLIAARAVQGIGAAMMNANGQAIITVFVSPENKSAAFGIYAAVMSISMALGPCAGGLLTQRFGWSSIFYVNLPVAFVGFILVLWLIPHMEANPAIKIDVVSSILLSLAISSFLLMITVASSGSDIITSKHVFVATVAALSVILLLSCVLYALRQRSVDDPLFSRDVFGTSTGLRKISATGLLASISMFMGYSVLNYLLPNWLQHNLGLSQSKAGLFLMIHPACMIPMSFLSARIAKTDPNSINSAASRSGWGAFAQRTLLFVHRWQLMIGLVCIFAGLVFLGHNFSATAPNARVFVMTGVSTSLMGIGLVVFMVPNESRILACPRTESSGAMGSLTASARTLGIAIGVAVTGSIFNAFHFLNDTIADSSTSDDDNVRTEAAKTYPGASGAAAWCSLIFVAVAIGFVSWQTVALKRDPKLEEELHLNAASRLKAAGAEHPVDVSA* # PASA_UPDATE: g10135.t1, single gene model update, valid-1, status:[pasa:asmbl_8670,status:3], valid-1 NODE_647_length_19635_cov_41.7461 . gene 2830 4752 . - . ID=g10135;Name=g10135.t1 NODE_647_length_19635_cov_41.7461 . mRNA 2830 4752 . - . ID=g10135.t1;Parent=g10135;Name=g10135.t1 NODE_647_length_19635_cov_41.7461 . five_prime_UTR 4502 4752 . - . ID=g10135.t1.utr5p1;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . exon 4029 4752 . - . ID=g10135.t1.exon1;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . CDS 4029 4501 . - 0 ID=cds.g10135.t1;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . exon 3686 3793 . - . ID=g10135.t1.exon2;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . CDS 3686 3793 . - 1 ID=cds.g10135.t1;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . exon 2830 3124 . - . ID=g10135.t1.exon3;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . CDS 3076 3124 . - 1 ID=cds.g10135.t1;Parent=g10135.t1 NODE_647_length_19635_cov_41.7461 . three_prime_UTR 2830 3075 . - . ID=g10135.t1.utr3p1;Parent=g10135.t1 #PROT g10135.t1 g10135 MSLFVSVMWQDNRCIVPLHDLCGFDRVGKCGKSWYMWLLNGSFVVTACRLIATRSKPLVLWMKWGCACMMLYLCCYFVGIPLVEWDLLFQKDDCDLSDACAYYDEGDAQRPYGHALVVGIERYPLKVTKRMGQKLIAKRSHVKPFLKVVNYNHLMPTRYALDVELKHAVNKELVRDPTQRNKSRKDVRKLLEERYVSGKNKWFFQKLRF* # ORIGINAL: g10136.t1 original gene structure, not modified by PASA NODE_647_length_19635_cov_41.7461 AUGUSTUS gene 5684 8806 . + . ID=g10136;Name=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS mRNA 5684 8806 . + . ID=g10136.t1;Parent=g10136;Name=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 5684 5749 . + . ID=g10136.t1.exon1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 5684 5749 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 5917 5995 . + . ID=g10136.t1.exon2;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 5917 5995 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 6089 6168 . + . ID=g10136.t1.exon3;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 6089 6168 . + 2 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 6295 6351 . + . ID=g10136.t1.exon4;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 6295 6351 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 6608 6627 . + . ID=g10136.t1.exon5;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 6608 6627 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 6771 6949 . + . ID=g10136.t1.exon6;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 6771 6949 . + 1 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 7080 7207 . + . ID=g10136.t1.exon7;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 7080 7207 . + 2 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 7558 7696 . + . ID=g10136.t1.exon8;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 7558 7696 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 7939 8066 . + . ID=g10136.t1.exon9;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 7939 8066 . + 2 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 8345 8491 . + . ID=g10136.t1.exon10;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 8345 8491 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 8681 8806 . + . ID=g10136.t1.exon11;Parent=g10136.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 8681 8806 . + 0 ID=cds.g10136.t1;Parent=g10136.t1 #PROT g10136.t1 g10136 MKITIKTLQQTSFPVEVEATDSVASLKEKILKEKGGDYAVANQKLIYAGAIMVDSNPLSQYGVKENDFIVVMVTKPKAAPAAAPAAEAPATPTKAPEPKKEEPKAAPVTPAPQPVSTPSAPVQATPAAPTATPQAAPTPLGYSSAASALGKFSRGLLLRALTGADYERMVQQLMEMGFDRESVVAALRAAFNNPDRAVDYLMNGVPNFPEPAAAPAGGDAPQAGGDLLMEEDDEGDEEDMSALMGAGGGAEGLEFLRDQPQFQQLREVVRSNPQLLQPLLQQLGQANPELLRRISENQTAFMNLLSEPARGPGAHGGARQPGQLPPGTIAVTPEEREAIERLEGLGFDRRLVIEAYFACDKNEQLAANYLFDHGNDEDQNMQ* # PASA_UPDATE: g10134.t1, single gene model update, valid-1, status:[pasa:asmbl_8673,status:12], valid-1 # PASA_UPDATE: g10134.t2, single gene model update, valid-1, status:[pasa:asmbl_8672,status:12],[pasa:asmbl_8674,status:13], valid-1 NODE_647_length_19635_cov_41.7461 . gene 239 2704 . + . ID=g10134;Name=g10134.t1 NODE_647_length_19635_cov_41.7461 . mRNA 239 2704 . + . ID=g10134.t1;Parent=g10134;Name=g10134.t1 NODE_647_length_19635_cov_41.7461 . five_prime_UTR 239 239 . + . ID=g10134.t1.utr5p1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 239 336 . + . ID=g10134.t1.exon1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 240 336 . + 0 ID=cds.g10134.t1;Parent=g10134.t1;5_prime_partial=true NODE_647_length_19635_cov_41.7461 . exon 488 566 . + . ID=g10134.t1.exon2;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 488 566 . + 2 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 736 805 . + . ID=g10134.t1.exon3;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 736 805 . + 1 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 961 1142 . + . ID=g10134.t1.exon4;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 961 1142 . + 0 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 1327 1442 . + . ID=g10134.t1.exon5;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 1327 1442 . + 1 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 1681 1743 . + . ID=g10134.t1.exon6;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 1681 1743 . + 2 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 1891 1945 . + . ID=g10134.t1.exon7;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 1891 1945 . + 2 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 2171 2334 . + . ID=g10134.t1.exon8;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 2171 2334 . + 1 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . exon 2598 2704 . + . ID=g10134.t1.exon9;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . CDS 2598 2623 . + 2 ID=cds.g10134.t1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . three_prime_UTR 2624 2704 . + . ID=g10134.t1.utr3p1;Parent=g10134.t1 NODE_647_length_19635_cov_41.7461 . mRNA 239 2704 . + . ID=g10134.t2;Parent=g10134;Name=g10134.t1 NODE_647_length_19635_cov_41.7461 . five_prime_UTR 239 239 . + . ID=g10134.t2.utr5p1;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 239 336 . + . ID=g10134.t2.exon1;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 240 336 . + 0 ID=cds.g10134.t2;Parent=g10134.t2;5_prime_partial=true NODE_647_length_19635_cov_41.7461 . exon 488 566 . + . ID=g10134.t2.exon2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 488 566 . + 2 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 736 805 . + . ID=g10134.t2.exon3;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 736 805 . + 1 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 961 1142 . + . ID=g10134.t2.exon4;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 961 1142 . + 0 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 1324 1442 . + . ID=g10134.t2.exon5;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 1324 1442 . + 1 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 1681 1743 . + . ID=g10134.t2.exon6;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 1681 1743 . + 2 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 1891 1945 . + . ID=g10134.t2.exon7;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 1891 1945 . + 2 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 2171 2334 . + . ID=g10134.t2.exon8;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 2171 2334 . + 1 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . exon 2598 2704 . + . ID=g10134.t2.exon9;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . CDS 2598 2623 . + 2 ID=cds.g10134.t2;Parent=g10134.t2 NODE_647_length_19635_cov_41.7461 . three_prime_UTR 2624 2704 . + . ID=g10134.t2.utr3p1;Parent=g10134.t2 #PROT g10134.t1 g10134 ISCVGGTANCRFIPEVIQCVNRGWDGTDVNWECKSDMESIYRFASTVVTCEGYDYPEDPYILKGSCGVEVAIDLTPEASRAQQQHGGGYGGNNPGGAYVYGPHGRGSYSSGGIGGAAGNLFSVAVVGFLLYTLYRTCIAPSVGATRGWGGGSGYGGSGYPGGGGGGGYPPGSGGYPGTGYGDSCGPSGVPPAPAPGVGGFWTGAATGGLLGYLMGNRGNYGGGYGYQAPAYGGGYRTYGAPTYGGGGGFGFGGGGGGFGGGGGGGAGPSTTRTASGFGGTRRR* #PROT g10134.t2 g10134 ISCVGGTANCRFIPEVIQCVNRGWDGTDVNWECKSDMESIYRFASTVVTCEGYDYPEDPYILKGSCGVEVAIDLTPEASRAQQQHGGGYGGNNPGGAYVYGPHGRGSYSSGGIGGAAGNLFSVAVVGFLLYTLYRTCIAPSVGSATRGWGGGSGYGGSGYPGGGGGGGYPPGSGGYPGTGYGDSCGPSGVPPAPAPGVGGFWTGAATGGLLGYLMGNRGNYGGGYGYQAPAYGGGYRTYGAPTYGGGGGFGFGGGGGGFGGGGGGGAGPSTTRTASGFGGTRRR* # ORIGINAL: g10140.t1 original gene structure, not modified by PASA NODE_647_length_19635_cov_41.7461 AUGUSTUS gene 16018 16944 . + . ID=g10140;Name=g10140.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS mRNA 16018 16944 . + . ID=g10140.t1;Parent=g10140;Name=g10140.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS exon 16018 16944 . + . ID=g10140.t1.exon1;Parent=g10140.t1 NODE_647_length_19635_cov_41.7461 AUGUSTUS CDS 16018 16944 . + 0 ID=cds.g10140.t1;Parent=g10140.t1 #PROT g10140.t1 g10140 MVRPLFVGDTLTNRARVLAYRNTRDGKASIVLSEHQLIDQNGDIACSAIKGTMFEAIPGLPAGEGVEHPDARNARVVKTGDWMPAPLSSGPYGWLRTLSERQVEKVRPAFPVHAGMTLVHRIVKIFGDNEHRALINLLQVTNSHSQNTLQFGPSQLLVAGPLSISGTISIAGQDLGVPLAETVHNTQQLNKLNANDVLVAVTRVLEAAPAPWNPELEIVRVVTHGIKNIDTYDLLRLKLPNVMFEAPETDTLPRVFEDAILQQCPVLYKKVVTRIHRTFVRPSASKRSEEARVKLQQGRMSGIDVAAR* # PASA_UPDATE: g13253.t1, single gene model update, valid-1, status:[pasa:asmbl_7560,status:12], valid-1 NODE_4718_length_1298_cov_32.749 . gene 83 1106 . - . ID=g13253;Name=g13253.t1 NODE_4718_length_1298_cov_32.749 . mRNA 83 1106 . - . ID=g13253.t1;Parent=g13253;Name=g13253.t1 NODE_4718_length_1298_cov_32.749 . five_prime_UTR 1102 1106 . - . ID=g13253.t1.utr5p1;Parent=g13253.t1 NODE_4718_length_1298_cov_32.749 . exon 522 1106 . - . ID=g13253.t1.exon1;Parent=g13253.t1 NODE_4718_length_1298_cov_32.749 . CDS 522 1101 . - 0 ID=cds.g13253.t1;Parent=g13253.t1 NODE_4718_length_1298_cov_32.749 . exon 83 273 . - . ID=g13253.t1.exon2;Parent=g13253.t1 NODE_4718_length_1298_cov_32.749 . CDS 83 273 . - 2 ID=cds.g13253.t1;Parent=g13253.t1;3_prime_partial=true #PROT g13253.t1 g13253 MEGPESDPGINTRALQELFTLTEERSSDITYVISVSVIEIYNETVRDLLGADVNAKLEIKQSPEGNYVPGLVSYEVNNVADLRKIFEIGRANRQTATTNMNEHSSRSHALLCVTVEGTNVGTGQRTIGRLNLVDLAGSERVGKSEVTGDRLKEAQNINSSLSALGDVIHALLNKQKHIPFRNSKLTYLLQDSLGGDSKTLMMVQVSPAEYNVNETMCTLNFASRVRSVELGAASKRTEGPSSSAAGQVANADKRAAG # ORIGINAL: g7939.t1 original gene structure, not modified by PASA NODE_3227_length_3962_cov_33.1106 AUGUSTUS gene 539 3807 . + . ID=g7939;Name=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS mRNA 539 3807 . + . ID=g7939.t1;Parent=g7939;Name=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 539 804 . + . ID=g7939.t1.exon1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 539 804 . + 2 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 1198 1401 . + . ID=g7939.t1.exon2;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 1198 1401 . + 0 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 1822 2011 . + . ID=g7939.t1.exon3;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 1822 2011 . + 0 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 2193 2308 . + . ID=g7939.t1.exon4;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 2193 2308 . + 2 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 2632 2814 . + . ID=g7939.t1.exon5;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 2632 2814 . + 0 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 3118 3268 . + . ID=g7939.t1.exon6;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 3118 3268 . + 0 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 3471 3712 . + . ID=g7939.t1.exon7;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 3471 3712 . + 2 ID=cds.g7939.t1;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS exon 3805 3807 . + . ID=g7939.t1.exon8;Parent=g7939.t1 NODE_3227_length_3962_cov_33.1106 AUGUSTUS CDS 3805 3807 . + 0 ID=cds.g7939.t1;Parent=g7939.t1 #PROT g7939.t1 g7939 VNVHAETIRNMCNKNGESLVINYRNLCIAHPVLAIYVADAPTEMLKIFDEAARDVVLETYPDYDRIANEIHVRIQDLSLVESLREIRQTHLNTLIRIRGVVTRRTGVFPQLKYIKYDCVKCGFVLGPYYQDQGAEVKVGMCPECQSKGPFTINVEQTVYRNYQKITMQESPGSVTAGRLPRQRDVILLWDLIDCCKPGDEIDLTGVYRNNFDASLNTANGFPVFATVIEANYVQRREDEFADVNLTDEDVAEIRSLAKDERIGERIIRSMAPSIYGHDDIKTALALAMFGGEAKNPGNTRLRGDINVLLLGDPGTAKSQFLKYVEKTSPRVVYTTGQGASAVGLTASVHRDPVMKEWTLEGGALVLADKGICLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPVKGRYDPGLTFAQNVELTEPILSRFDILCV* # PASA_UPDATE: g7482.t1, single gene model update, valid-1, status:[pasa:asmbl_8993,status:12],[pasa:asmbl_8997,status:12], valid-1 NODE_710_length_18772_cov_46.496 . gene 542 4067 . + . ID=g7482;Name=g7482.t1 NODE_710_length_18772_cov_46.496 . mRNA 542 4067 . + . ID=g7482.t1;Parent=g7482;Name=g7482.t1 NODE_710_length_18772_cov_46.496 . five_prime_UTR 542 643 . + . ID=g7482.t1.utr5p1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 542 810 . + . ID=g7482.t1.exon1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 644 810 . + 0 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 948 1097 . + . ID=g7482.t1.exon2;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 948 1097 . + 1 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 1220 1315 . + . ID=g7482.t1.exon3;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 1220 1315 . + 1 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 1532 1637 . + . ID=g7482.t1.exon4;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 1532 1637 . + 1 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 1879 2430 . + . ID=g7482.t1.exon5;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 1879 2430 . + 0 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 2651 2827 . + . ID=g7482.t1.exon6;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 2651 2827 . + 0 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 2970 3070 . + . ID=g7482.t1.exon7;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 2970 3070 . + 0 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . exon 3422 4067 . + . ID=g7482.t1.exon8;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . CDS 3422 3542 . + 1 ID=cds.g7482.t1;Parent=g7482.t1 NODE_710_length_18772_cov_46.496 . three_prime_UTR 3543 4067 . + . ID=g7482.t1.utr3p1;Parent=g7482.t1 #PROT g7482.t1 g7482 MARFAVAFAVAVVAALCFCAVNAEDTDCPFTPGTVGWFEQRLNHFNPTDRRVFKQKYFEDKCRWRGCGSPVFLYICGEGTCSGVQNDYTQQLATDLNSAIVVLEHRYYGDSAPFEHLTTDNLQYLSSKQALFDLAAFRDFYNTQLNCSADNASPWFTFGVSYPGALSGWFALKFPHLTKGSHSSSGVVNAILSFPEFDEQVARSVGVDCANALRAATAGIEAGLSGNGGDNNATKAMFGVTQPMDDSDFLLLVADSAAISVQYGHQEALCSAMLAGVHAAAGKTVGEDVDRVANPYLAHAAAAADAFAAYCKSYYYPIFEVDPMSYGREYLLQDASGPASGSRQWWWQTCSELAYFQVAPASPASIRSSKLDIDYFYGLCKAVFGTDVIPEVDATNVYYGGANIGTRKTIYTNGSQDPWQWASVTSATSHTTPAVVVECTNCAHGVTLRGCPQHPVQPAGDASKCDNPAAVAAAREELAAFIKAALASE* # PASA_UPDATE: g7484.t1, single gene model update, valid-1, status:[pasa:asmbl_8995,status:12], valid-1 NODE_710_length_18772_cov_46.496 . gene 8855 10028 . + . ID=g7484;Name=g7484.t1 NODE_710_length_18772_cov_46.496 . mRNA 8855 10028 . + . ID=g7484.t1;Parent=g7484;Name=g7484.t1 NODE_710_length_18772_cov_46.496 . exon 8855 10028 . + . ID=g7484.t1.exon1;Parent=g7484.t1 NODE_710_length_18772_cov_46.496 . CDS 8855 9997 . + 0 ID=cds.g7484.t1;Parent=g7484.t1 NODE_710_length_18772_cov_46.496 . three_prime_UTR 9998 10028 . + . ID=g7484.t1.utr3p1;Parent=g7484.t1 #PROT g7484.t1 g7484 MASTTGLLDLPEEVCVTYLLKPLYKHNVGNIVRLRRVCKGLQRLIDSYFTDIDRGVPIRVQISEILPPGTSPTESDDIAKFGYPVNLSTPAFKIAIPSSFNDYFRLYIPERLSDADVVFKVGYIDKAASRWNFESIVNVRHMTTMALQRDGTNFAVAIHGTNVATRHGEDMVVFLACSFDEDTRTFRYEGPLVRKWDDGDIKREYAVFPPHFMIKTAMRRGVWWIDQKFERALFSCVRVTAHIEEARRRGGEKSEGVEEGTRKKRYDGADDGEGRSDGGEESVVDHMEHVELNYFGRSETIEDVLAALSKRHGGSCFEFRGFRKDSSVHHPSIPTSTKLKHLASKAPIASVYGSVRSSRVQEVELIVRPPFEILIGKCSN* # PASA_UPDATE: g7486.t1, single gene model update, valid-1, status:[pasa:asmbl_8996,status:12],[pasa:asmbl_8999,status:12], valid-1 NODE_710_length_18772_cov_46.496 . gene 14264 18565 . - . ID=g7486;Name=g7486.t1 NODE_710_length_18772_cov_46.496 . mRNA 14264 18565 . - . ID=g7486.t1;Parent=g7486;Name=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 18487 18565 . - . ID=g7486.t1.exon1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 18487 18565 . - 0 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 18093 18235 . - . ID=g7486.t1.exon2;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 18093 18235 . - 2 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 17374 17489 . - . ID=g7486.t1.exon3;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 17374 17489 . - 0 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 17040 17126 . - . ID=g7486.t1.exon4;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 17040 17126 . - 1 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 16611 16678 . - . ID=g7486.t1.exon5;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 16611 16678 . - 1 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 16175 16344 . - . ID=g7486.t1.exon6;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 16175 16344 . - 2 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 15765 15878 . - . ID=g7486.t1.exon7;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 15765 15878 . - 0 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 15481 15541 . - . ID=g7486.t1.exon8;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 15481 15541 . - 0 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . exon 14264 15236 . - . ID=g7486.t1.exon9;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . CDS 14524 15236 . - 2 ID=cds.g7486.t1;Parent=g7486.t1 NODE_710_length_18772_cov_46.496 . three_prime_UTR 14264 14523 . - . ID=g7486.t1.utr3p1;Parent=g7486.t1 #PROT g7486.t1 g7486 MIRLLHPANKSKDFVEGLLCAEILRTEDDNLIFRGNSFATKAADQFMKMTSLGYLQNTLHDVISTIYDLQDDVEIDPSKIAPDASIDVNRKAITAVVEKVWYAVWMSREKFPGPMRMLLHNITQRCKSHYGSDKNSLFKTISGIVFLRFICPAILAPSLFDIMPALPGTRSSRALTLVAKTLQTLANFKEGFEAKEQYMEFMNVFVRRETPVMVAFLDEITQPPTTKQETADVHGIDIDKELASIFYFLQEYRLSALSTNVHQESIERLCSILDDIQQKTGVVRFPTRSNSLDADGLALTQTLMAGASAQSRSRRSSNATEDANPRSRLGSISETSADAAAVAAAVAAASAASTGAGGPGAVGGGGVPLALGAGPGGRQRRRSSMQISVPDIVMEDDTSGNAASARASGALASVAYEGDYDDASYIDEQELFMELSSLRYQLEFAETKVKSLESQLESERSARLAAKQAWRARCSAMESEHSAKLDAMGMRLDDMAGRLAAAENLLAAARVGSRSR* # PASA_UPDATE: g7485.t1, single gene model update, valid-1, status:[pasa:asmbl_8998,status:3], valid-1 NODE_710_length_18772_cov_46.496 . gene 10534 13484 . + . ID=g7485;Name=g7485.t1 NODE_710_length_18772_cov_46.496 . mRNA 10534 13484 . + . ID=g7485.t1;Parent=g7485;Name=g7485.t1 NODE_710_length_18772_cov_46.496 . five_prime_UTR 10534 10721 . + . ID=g7485.t1.utr5p1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 10534 10839 . + . ID=g7485.t1.exon1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 10722 10839 . + 0 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 11095 11187 . + . ID=g7485.t1.exon2;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 11095 11187 . + 2 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 11525 11538 . + . ID=g7485.t1.exon3;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 11525 11538 . + 2 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 11747 11956 . + . ID=g7485.t1.exon4;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 11747 11956 . + 0 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 12207 12422 . + . ID=g7485.t1.exon5;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 12207 12422 . + 0 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . exon 12888 13484 . + . ID=g7485.t1.exon6;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . CDS 12888 13085 . + 0 ID=cds.g7485.t1;Parent=g7485.t1 NODE_710_length_18772_cov_46.496 . three_prime_UTR 13086 13484 . + . ID=g7485.t1.utr3p1;Parent=g7485.t1 #PROT g7485.t1 g7485 MAQAGQQYGTPFAEPPPADALPSYAQSFQSAGYQTAPPPSYNNDVEIGAIPPDHQRWKGPVNFSEVSIRQAFIKKVYCLLGCQLLITFGIVALFTFVTPVKNWANDNPAVFISALVLSIVFIVILACAGDIRRRTPHNYILLFLFTLCEGYLLGSIAGRYDRNEVFIAIGITMAIVVALTLFAFQTRFDFTGMGPYLFVGIVCLLIFGFLNIFLHSQVLHVLYASLGALLFSLYLVYDTQLMLGGSHAYSLSSEEYVFASLNIYLDIVQLFLMILSLVGGRH* # PASA_UPDATE: g7483.t1, single gene model update, valid-1, status:[pasa:asmbl_8994,status:12], valid-1 NODE_710_length_18772_cov_46.496 . gene 4069 8353 . - . ID=g7483;Name=g7483.t1 NODE_710_length_18772_cov_46.496 . mRNA 4069 8353 . - . ID=g7483.t1;Parent=g7483;Name=g7483.t1 NODE_710_length_18772_cov_46.496 . exon 7022 8353 . - . ID=g7483.t1.exon1;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . CDS 7022 8353 . - 0 ID=cds.g7483.t1;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . exon 6134 6635 . - . ID=g7483.t1.exon2;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . CDS 6134 6635 . - 0 ID=cds.g7483.t1;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . exon 4069 5856 . - . ID=g7483.t1.exon3;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . CDS 4130 5856 . - 2 ID=cds.g7483.t1;Parent=g7483.t1 NODE_710_length_18772_cov_46.496 . three_prime_UTR 4069 4129 . - . ID=g7483.t1.utr3p1;Parent=g7483.t1 #PROT g7483.t1 g7483 MDLSSGGEDHSGSAPAPAQIGADATHSLAYDHHHDFVPPEVILFDEANTSTVLYEPEQPQDADQSTFDGSGAAGAGVGEEQPSTSIERGNDKRSSVPSKVDRVASASHSLESTPRSSILSPSPLSTSSSDVPHQSHWTTLHVSQSHPLHPHFLDADTSSHGDIRSLHSSRMDTQPHSSHRGDSDATGRDNNDAEPEVTLRHADDGLLHPLRRSLSQESTLTVPEDTHIDLPLSARLSLHRESLTTEYGEQFAGEYRDAIPTHPQEPGAKPKKATPPGATDEQWNLWAFFDRHSTRIGQFLFLVVVVFFAVMIGLLVSELVPVFALFDSHVTTDVTLVNVTMGSAVDLSSIPFTATLSFPNYNGQDVAGQVRSSCLYVSPGVSGDASTAVLCAKTEWFSVAAVMPIDGFISVTDASLLSTLLSQYATYGWLEGYTLSVFTVVTLKSRFAFGVAVSRSFTEPVTWGTASDGSDASSDTLEEFTLGNPQPNAQSYAAVVSRFGSNARGGLAIGLPNNTFSVVMAAQQTPLLQGALVIGARYARTRRKRAIAVDVPVEKEVAVGSFDSIVLSKSSGYTVRLSGLSTRGKHAAALQEVAALLVGGNTVSLRVVANGGYIGPGLESAILRQLSFPFVTCARLPTLIAFNGACSAAALDADVGTGNIVDSYSMRILGVEVHRIQLAANSTLAAFNLAHPNPSYRNLSADANTLLAWTTYWAGTIASARASSLPLGVDVSAVNASLSTAEQQTIAPAAILDVFSSGSSNGSVAAAWVRAAIVDAASFSDSIAPCIIAGGTLDMLLRVRMGDLGTLLHDALSDATVRVSIPSSFGGIFGESSLGMLLLASGGIEDTQDTFKMSGKVTRFSGDVVTFGGVPLFSEVPITGSVMCPGDGAPCGRLSVRWDGIAQLTSPLSVGSVVPIYAHDPASVYSTLAFMRNSTATTADSNATLSRPDALDALASDVLLARDGRSVRVALQLSTCRIEYNHSIPAVARKPLVSAMRVALSTSKQVVLRRSAVAHMLSTASAVRESDDWADAIVDTLGGASIAGDDARVSTTRKRAIAVASVSIALTNPLPFDLALLSVRATVVTSSTSVNADNTTISMECSMSGQGDLGSPSARPVLSHRSPPLWIPAELSVDSSGNGTSTSCPARDANVVALTGTVHVSTARQGGFDAWVAYDGSDLLAVVSSR* # ORIGINAL: g1227.t1 original gene structure, not modified by PASA NODE_1953_length_8368_cov_40.3528 AUGUSTUS gene 428 6003 . - . ID=g1227;Name=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS mRNA 428 6003 . - . ID=g1227.t1;Parent=g1227;Name=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 5295 6003 . - . ID=g1227.t1.exon1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 5295 6003 . - 0 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 4321 4437 . - . ID=g1227.t1.exon2;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 4321 4437 . - 2 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 3860 4015 . - . ID=g1227.t1.exon3;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 3860 4015 . - 2 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 3508 3660 . - . ID=g1227.t1.exon4;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 3508 3660 . - 2 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 3180 3309 . - . ID=g1227.t1.exon5;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 3180 3309 . - 2 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 2574 2725 . - . ID=g1227.t1.exon6;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 2574 2725 . - 1 ID=cds.g1227.t1;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS exon 428 2332 . - . ID=g1227.t1.exon7;Parent=g1227.t1 NODE_1953_length_8368_cov_40.3528 AUGUSTUS CDS 428 2332 . - 2 ID=cds.g1227.t1;Parent=g1227.t1 #PROT g1227.t1 g1227 MVHLGESIRRLFRRHTATVDAAANEGYATSGDGLGAAWTGSQDTLGTRIDGVSGRSDAGDAAGLHSPLSARQGSHSPSQSLSPFVNQSRLGGIGSSLLRPLVTDLSAHIPHFDILGNAIAAKTASEISLEGSTVHHHPFEVPATAAEESGGIKGAVGVASDGHEGGVDSELPTQGSDGDVRGVEPGCEVLCWGNNAHGQLGVGGTDNVLTPRRIEYFDGHAVTAIASGSRHTIVVAGQLGHDDVESISKPRLIRALAEKRIVQIACGREFSAALSECGELYVWGCNLSRQLARANMDHSPVPIVVAPMIGKPVIALACGDAHTVVLTASGTVYLWGSERACSPTLGDSGWVAPMLLRSPLSDKIVQIACGSSHTLLLTENGRIITFGVGTNGRLGHGTEANELNPRVVIELLGVKARQSILSVYSWGLGSSGQLGMGATTNSCIPNPIEVLFDKRVLGISCGANHCFAFVYTGEGGVPASVQGHFKAIRRPLALEIDALREMAGAAALSDNYARLSRDVAVVFSSPSCINASFRRPPPTTAVMDGPITSPPALPVAASLSSPSKVSSLSADDAQRTWDASNHVTDVESLCLAFDLLLSMPPVVGRTLGMAIVRLALTISEGETFALDDECIGAPLAVMLSPFVADTSFYYQRDVAVRMGALVGSMGSAASAALHRHLCRLSPQRMQSAVRSLRKYLNQSATTVGTTGHLHWDPAVLCSLSLLMERFRRASDSMGGDAPRVPDDDFYCFALCETANLEEDYAVWRTGRPGFCLCRFPFLMDTGTKARLLRIDAVRQMRVQVERALFSFPLMPTNPFLVLEVRREHIVADTLARVIGSTPSQIKRPLKVKFVGEQGVDEGGVKKEFFQLLLRALLDPAQGLFLETKEARILWFAPASDPSAEQRHFLLGVLFGLAIYNNVLVEPFFPSVMYKKLLGGKPTLADLAGLDPTVARSLHQLLEYPGDDVEAVFSLTFSITEREVSPSSHPSKSSPGRRSSHRKSTDAQMAFEAYGVVAPAQYDDDNNNDNENSDNDNSDGGDANTASVGADAGGGRDVGVSQQRSAAEPSAAADHVAERATDTDGSGGVPRMRTKDLKAHGSDTAVTNANRQ # ORIGINAL: g3809.t1 original gene structure, not modified by PASA NODE_5494_length_830_cov_32.9325 AUGUSTUS gene 92 590 . - . ID=g3809;Name=g3809.t1 NODE_5494_length_830_cov_32.9325 AUGUSTUS mRNA 92 590 . - . ID=g3809.t1;Parent=g3809;Name=g3809.t1 NODE_5494_length_830_cov_32.9325 AUGUSTUS exon 561 590 . - . ID=g3809.t1.exon1;Parent=g3809.t1 NODE_5494_length_830_cov_32.9325 AUGUSTUS CDS 561 590 . - 0 ID=cds.g3809.t1;Parent=g3809.t1 NODE_5494_length_830_cov_32.9325 AUGUSTUS exon 92 295 . - . ID=g3809.t1.exon2;Parent=g3809.t1 NODE_5494_length_830_cov_32.9325 AUGUSTUS CDS 92 295 . - 0 ID=cds.g3809.t1;Parent=g3809.t1 #PROT g3809.t1 g3809 MFNPDAYIVKDASDKGKGAEAARPSHPGLGRLVADSVAACDVDIRPTLHGCVIATGGNTLVPGFVERLQAEVYAVAPP # PASA_UPDATE: g3371.t1, single gene model update, valid-1, status:[pasa:asmbl_3927,status:12], valid-1 NODE_227_length_30454_cov_46.8754 . gene 3424 9091 . + . ID=g3371;Name=g3371.t1 NODE_227_length_30454_cov_46.8754 . mRNA 3424 9091 . + . ID=g3371.t1;Parent=g3371;Name=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 3424 4649 . + . ID=g3371.t1.exon1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 3424 4649 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 4885 5026 . + . ID=g3371.t1.exon2;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 4885 5026 . + 1 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 5226 5399 . + . ID=g3371.t1.exon3;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 5226 5399 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 5580 5673 . + . ID=g3371.t1.exon4;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 5580 5673 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 5821 6281 . + . ID=g3371.t1.exon5;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 5821 6281 . + 2 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 6412 7105 . + . ID=g3371.t1.exon6;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 6412 7105 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 7261 7331 . + . ID=g3371.t1.exon7;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 7261 7331 . + 2 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 7527 7734 . + . ID=g3371.t1.exon8;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 7527 7734 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 7940 8067 . + . ID=g3371.t1.exon9;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 7940 8067 . + 2 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 8271 8450 . + . ID=g3371.t1.exon10;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 8271 8450 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . exon 8603 9091 . + . ID=g3371.t1.exon11;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . CDS 8603 8989 . + 0 ID=cds.g3371.t1;Parent=g3371.t1 NODE_227_length_30454_cov_46.8754 . three_prime_UTR 8990 9091 . + . ID=g3371.t1.utr3p1;Parent=g3371.t1 #PROT g3371.t1 g3371 MASSKRSLALPDASSNAIRGGAVSSGGNLLGSSFNLDKRLSTANASFIGKSSGRSGEGLIGAPSRARGAESRAGLETFDGPDGDLRLLERELAAQESRVQALRTQLQHRKAGGGDVGLRVSAIEAKLNSERDASMKLHEKIQGIRANVKHIDDDELLLEDELRLLEEEAGAETLAFAKLKLEQVEAQRRLTEKEIATRALEVDSIRQILREREERDMAAVKAHLKGTETRVIMEKLYGSVDEAVGGERASNIGREREAEERRRLTDELLSKRKDARAKQSHATDDRMRRLEKERAALEERRRGLLQKKKDLRAGGASGNVDTHSSEGAGEDRMSSTSTDGAADSAVIRAMDNLKPTSERLRLLKRDLAKDRRYSRPKEYGGELGPQSYRPWQLGAYYMTRDIIVSIADRICDERSLRAAGLNELRDGFLGWDVGRRNLEKRIADIEVNTVAAEIAKEIENEVVTDLAREIYSEISSVTTLARKWVESILVDNVERIGVEVYRQNGERVAIRGLLLRSLAEMQKTRAKRPLVFAPTQKLVPEVPGLRDSDAGAKDAVAPTAEYSRQEDDDYEYERLHLCEIPDSAQVSPHMHPQACVRLFARREEYFWSYVTVTLAKPDVKRTRGGISFTSVAPSGNVVAVATLSGDMYIYDCGRRAQQMPAAMAHGVKVTQKAETDAVGVVGWLSWSYDGTRLVGVDDQGRLHVWILSALNDAVDINTGEPVQAMKPSWTFAPADLVFAKGPFATRKTGPRTLADRDERQDDDIGARTTDSARPVQAVFFPSLTLLGGQHSVVVCMSTGDILKLNFPGATASAYVPIIPVTPDLRSEVAFGVGVELFRGHNQPVTSVAFPGRAATMVTVDAGGHLMVWDYAAANVSGFGWFVPSRQVRVEFAVTRYEKLGNPLALFTDARKTGLRLHGRTKAEVKKERSDAEARIARMRLGNPYHVTQGKSKSQEYTYAPSTVPTEGAEFHIITRAQDRLLISHMTQRHVPVKHHAAVILDARVSPNDDHMVFLALFAEHGQKAPHLSICSVNLTAVKLGHIRIDVPITDAEFKKYRANPGLCSIEVSSVIDVMRSDYVYLAVSGSVSLYSLMTGVRVKVVSVGKLPQMARLAVSRDCGALFVTSKTSSNLFTVFFADGNGPTLRRRMYHTLAPEERKRGCPAELAIRMPPPKSNPHGLHEGWAPAGTAQRHIARIVGDIIDAALLQSSSSSSTSREKGGKKGGGRNSQSSTTSKASKASRKSRSNDGTLRGDG* # ORIGINAL: g3370.t1 original gene structure, not modified by PASA NODE_227_length_30454_cov_46.8754 AUGUSTUS gene 1 2523 . - . ID=g3370;Name=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS mRNA 1 2523 . - . ID=g3370.t1;Parent=g3370;Name=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 1350 2523 . - . ID=g3370.t1.exon1;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 1350 2523 . - 0 ID=cds.g3370.t1;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 1120 1136 . - . ID=g3370.t1.exon2;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 1120 1136 . - 2 ID=cds.g3370.t1;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 746 897 . - . ID=g3370.t1.exon3;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 746 897 . - 0 ID=cds.g3370.t1;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 244 572 . - . ID=g3370.t1.exon4;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 244 572 . - 1 ID=cds.g3370.t1;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 1 62 . - . ID=g3370.t1.exon5;Parent=g3370.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 1 62 . - 2 ID=cds.g3370.t1;Parent=g3370.t1 #PROT g3370.t1 g3370 MAALKNYTDGRIAARRYVTWWSCLSIVLFVAAGIVVPIIVYNESLHNEQDTLAYRFDEITNAELSNVLGIMTQTLRSVRNMRIPVHIAGENMTNVQFLDSAELVARPTSLATLVWNPLVRNENRDAFEQRIRALNNNTADYANFSIRELTVNVSNLDPAQALIATKASVRPTYIPYTYVWVTPALPFHRAARLGIDLFTSAVHGNLSKSFYTGEPLINTKVVFPFDRRNKGLYISTPMFNSVSTPDTVQARFDSAVGLIAAAIGVSAMVEEARAYTKSMSMYLFDETGTEILYADAGLPEVASAADISSVEGARFEGTLAIADRSFVFVAIPTDLLVDDTLSYGPRLFSAVTAVAFFLVLVATVFAIRKIVDTEEGMAVAEQRRHLVTQMIGYVNHEIRNPLNGIVGLVDHAAETTRDCLRASTPDKESIRAIAVDLKDTSNMCELMRHIIDDILDIRCLDEGRLKIITGPISLGCLLNDAVAIIQMKLTEKPSLSLSVEAFDTSAVIVCDAVRVKQLLLNFLINSIKYSESGPIDVRVGVVSGGERLRFSVQDCGKGIEESQRGLVFKPFMQLNGAA # PASA_UPDATE: g3376.t1, single gene model update, valid-1, status:[pasa:asmbl_3932,status:12], valid-1 NODE_227_length_30454_cov_46.8754 . gene 25860 29695 . + . ID=g3376;Name=g3376.t1 NODE_227_length_30454_cov_46.8754 . mRNA 25860 29695 . + . ID=g3376.t1;Parent=g3376;Name=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 25860 25922 . + . ID=g3376.t1.exon1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 25860 25922 . + 0 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 26180 26256 . + . ID=g3376.t1.exon2;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 26180 26256 . + 0 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 26749 26811 . + . ID=g3376.t1.exon3;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 26749 26811 . + 1 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 27318 27437 . + . ID=g3376.t1.exon4;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 27318 27437 . + 1 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 27938 28086 . + . ID=g3376.t1.exon5;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 27938 28086 . + 1 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 28574 28901 . + . ID=g3376.t1.exon6;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 28574 28901 . + 2 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . exon 29354 29695 . + . ID=g3376.t1.exon7;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . CDS 29354 29588 . + 1 ID=cds.g3376.t1;Parent=g3376.t1 NODE_227_length_30454_cov_46.8754 . three_prime_UTR 29589 29695 . + . ID=g3376.t1.utr3p1;Parent=g3376.t1 #PROT g3376.t1 g3376 MRVYTAAPVFSDVPLENTSSSSPYVWGVSSPRVINGSDMHNYFSALCYFFGRNLIRHKPNAIVGLVASSKGGSRIESWMSDESLAKCSINVHTTQSSHAQLYNGNVFPDNVSPIGSIHPRNKQGVADRFFLLARTLVYGETDVVTGGPTFLYASRLQANGPSWATYNITLSFEIGRTGELSLRGTEHCVTCCNNASAFDVFVHPRGWIPALSARVVRSRDPGDGVGIVEVSSIGLPLGVRFAYSNTPECAVYNERHLPSMPLGAYFVDGSLIAYPWFRSGPSVTGRHNSRAWIAGPILGGIIGVVVVVALILLLYRRYSHRYQLLDTAETAFALEEMPAALQQG* # PASA_UPDATE: g3373.t1, single gene model update, valid-1, status:[pasa:asmbl_3928,status:3], valid-1 NODE_227_length_30454_cov_46.8754 . gene 17714 19589 . + . ID=g3373;Name=g3373.t1 NODE_227_length_30454_cov_46.8754 . mRNA 17714 19589 . + . ID=g3373.t1;Parent=g3373;Name=g3373.t1 NODE_227_length_30454_cov_46.8754 . five_prime_UTR 17714 17771 . + . ID=g3373.t1.utr5p1;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . exon 17714 17942 . + . ID=g3373.t1.exon1;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . CDS 17772 17942 . + 0 ID=cds.g3373.t1;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . exon 18273 18539 . + . ID=g3373.t1.exon2;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . CDS 18273 18539 . + 0 ID=cds.g3373.t1;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . exon 18936 19589 . + . ID=g3373.t1.exon3;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . CDS 18936 19004 . + 0 ID=cds.g3373.t1;Parent=g3373.t1 NODE_227_length_30454_cov_46.8754 . three_prime_UTR 19005 19589 . + . ID=g3373.t1.utr3p1;Parent=g3373.t1 #PROT g3373.t1 g3373 MVNIHEVHESEEASARAAAPETSKDLVISDIAEDDDEFEDDDGEEDIEGEDDGDDDEDLYADESIFERIAALKEIVPEAHRDRISVVASVVAGATKGLLRFGGKTAWVVTTSVLLLVLPLGMEVEKEQQLIAWENEQKAAVQQQRQMLQPALYGGPVANPLGQVAGSR* # ORIGINAL: g3374.t1 original gene structure, not modified by PASA NODE_227_length_30454_cov_46.8754 AUGUSTUS gene 20218 22177 . - . ID=g3374;Name=g3374.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS mRNA 20218 22177 . - . ID=g3374.t1;Parent=g3374;Name=g3374.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 20636 22177 . - . ID=g3374.t1.exon1;Parent=g3374.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 20636 22177 . - 0 ID=cds.g3374.t1;Parent=g3374.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 20218 20310 . - . ID=g3374.t1.exon2;Parent=g3374.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 20218 20310 . - 0 ID=cds.g3374.t1;Parent=g3374.t1 #PROT g3374.t1 g3374 MSAPTKRGRSKASSGNSKASIGNGANGGGGGVHAASKNDDGALTSDGENQASSGDVSDDVNNAGGSASLSQLTYQFAPSQLQFGNVAQRLVFPLLGQEYGGLAGAAGAGGASGQVDPQMLQQQRQQQLQQQHQHQQLLLQQHLQQQHLHQQQQLQLQQHQQQQLQKQQQQQQHSQHPQQQQQQQQQQQQQQQQQQQQQQQQHQQHPQQFHQLQQLSNLAHMSAAQQAHATQPRLSATSPAHSNSTSAHSSAMSPPAKRVKPIPAAVSRTPSGKPRCSMCKCIMVYITDDGLCAKCRKVASRSPRNAAAQSAASAKGKASAVSQNAVANGNGAVPRAGGGKTPITRRKDKDSAFAAASIVANMGPPMPRGASAAMQASAKASAGRGAPRGRGNGASNGHNGAAGAGSMPQQHRMPPGMQQGVDGASMLAAAMAMNAAGGGGGGGGGGAGGMHRNADMALLSQLQMAQLAGLGNAVGNAQAGLQQLAGAQAYQQLLPGATQINFGAESAAAEALRELRMMNPSLNPLYSQNGDLAGENGGARCSVM* # ORIGINAL: g3372.t1 original gene structure, not modified by PASA NODE_227_length_30454_cov_46.8754 AUGUSTUS gene 10863 16804 . - . ID=g3372;Name=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS mRNA 10863 16804 . - . ID=g3372.t1;Parent=g3372;Name=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 16707 16804 . - . ID=g3372.t1.exon1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 16707 16804 . - 0 ID=cds.g3372.t1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 16231 16474 . - . ID=g3372.t1.exon2;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 16231 16474 . - 1 ID=cds.g3372.t1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 13021 16067 . - . ID=g3372.t1.exon3;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 13021 16067 . - 0 ID=cds.g3372.t1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 12414 12796 . - . ID=g3372.t1.exon4;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 12414 12796 . - 1 ID=cds.g3372.t1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 11540 12138 . - . ID=g3372.t1.exon5;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 11540 12138 . - 2 ID=cds.g3372.t1;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS exon 10863 11333 . - . ID=g3372.t1.exon6;Parent=g3372.t1 NODE_227_length_30454_cov_46.8754 AUGUSTUS CDS 10863 11333 . - 0 ID=cds.g3372.t1;Parent=g3372.t1 #PROT g3372.t1 g3372 MDTEPSERRAILLALGELSSNTATDATVNALNVISDILERAEDAYQNLVVDPYADERTNHPIGQLSNIVMDRESFVDSITTNLPFSRDAGVATAAMRTLLGLSATIHPDILLQDERMLDRIVECVHATDQPMRTYATGILSTALLEREVADRLVSTDFVSLALGRMRAYVHRTKGVAIPTLKPGVDEALSDAGILVPPGEEFGAAASQTQPQPYQQQTGRAPSSAANGAGSGGAGSGGSGGHAGSRGVLAAESSLGATQLGMSLRESRRRYDRRYAEPLYLIQCLAEVGEYQESLASIFEGGGMELALHYLTIGNSNRFFLFNSLRFLCGLLAHKKFASEFVDRGGVRLLLAIPKLSYVAGAVALCFYALASLSSVMEKVCLLPHPTTQNIVEQALWWIECGHDSARKNAALFFNVAFSFRAILELFDEKDGLRLLINVISTEQPIGDDTPHTSRPIMMHTCLALRQYVRMHLELLADTATRRKARRANADQRAVVPLPLPAYKAATLDTDRTAENMATVLDNFSLLYPSTQQNVRALRWRPADQLLKHDAIPLLLQLVEASDMWRMPDIAQFALETIHVAAALPSTHLAITTSQVEIDGGISERTGMAVVLAAAEGRPHQDPEVRKAALQVLCTMVCRQGAAASAFGTSGTGPPRLSSIGVRPQGPPGAPSAPTVRRPANGAVGNIAQGASRQLSGGGSGGPMSSDDVTWHVWENVRANNGIRVLLQLLHTRTPAKAADAIRALACRALAGLSRNSNIMQILSKLQVTGTLSELTREPLLPDSAAWHELFRSSAMDLIASITGRAGVAITSEAADHTLRKIEKAAIVSTTNVSYPEDELLRLIHAHLVAKGLLGAADALKKEAQLPDVSGLQAVLPAPPSGAVNQTPSVNAQNSAPPTPWVTGLSQRGSHDQHQHQHQHQRAASPEPPVHDPSNMPSQPLFHAPAPREQPRDPTSHVTVANQLAVQAVPSGGASTATAGTAVALGHVPPMTPLTLATPMRFRTPMTVRTLGTAGDHNDASQWSGASSLPRSQHAPGSQSQHLHYHHHHHNYQQQPHHHGADNGAGVGVGGAAGSQQTPVAGARGLLVPGETTAPKSLDVIVTQYLRDQHTHCANPVAVLPPFSLLKPHRCPEPIRPQNAPTSIASRVQRSQTHPPYGGANGRRLMRRFIYSRFRPIRVYRDDFSVFMCASFLGDGNRIALGTFSGEVKIFSVDTAEELVTATCHSGSVWSVRPSIDASLLLTSSSYGPVHSCLWSVENMEAPKASFEDDVIVMFSNSNELVVGTSPEATRIYSTATGQLLRTMSDPANANNYKHNCAYFNPTDDLVLSDGILWDPRISRKIHKFDKFNNYYSGKFHPSGLEVVINSEVWDIRTFKLLRTVPALEQSQIVFNDGGDVIYGVVRQYEDELHNRPRNPFSSTFRTFDASDYSSIATIDLEKKIVDLCPSPSDTRIAVVENDSTGSIRIDMDQVACRLYEVGRKRPSDDDSDLDEGDDDDEGDDDDDDDSDVESDDDSDAGDVDGLLAAGVAHSSSDSDVDGGDAELASADWASIESGDVGVAAESAEDDSGDGSDAEDEDEEIVDGIFGGQYRGTFISDSDESDDNDSDSFIPFF* # PASA_UPDATE: g3375.t1, single gene model update, valid-1, status:[pasa:asmbl_3930,status:12], valid-1 NODE_227_length_30454_cov_46.8754 . gene 23142 23857 . + . ID=g3375;Name=g3375.t1 NODE_227_length_30454_cov_46.8754 . mRNA 23142 23857 . + . ID=g3375.t1;Parent=g3375;Name=g3375.t1 NODE_227_length_30454_cov_46.8754 . five_prime_UTR 23142 23332 . + . ID=g3375.t1.utr5p1;Parent=g3375.t1 NODE_227_length_30454_cov_46.8754 . exon 23142 23857 . + . ID=g3375.t1.exon1;Parent=g3375.t1 NODE_227_length_30454_cov_46.8754 . CDS 23333 23728 . + 0 ID=cds.g3375.t1;Parent=g3375.t1 NODE_227_length_30454_cov_46.8754 . three_prime_UTR 23729 23857 . + . ID=g3375.t1.utr3p1;Parent=g3375.t1 #PROT g3375.t1 g3375 MPPACRETFFKDVILPCWREDPSLRPTFEHIANVALPRAMEENRLADDIRMDIRGDARTQPAPTALTKGKRSRTMEIFEGYSNVVCGDDPSDVGATEMIQMTFGADALADASSSMASLLPATNSYCDLSSS* # PASA_UPDATE: g13594.t1, single gene model update, valid-1, status:[pasa:asmbl_5624,status:12],[pasa:asmbl_5625,status:12], valid-1 NODE_314_length_27179_cov_52.1132 . gene 20 2092 . - . ID=g13594;Name=g13594.t1 NODE_314_length_27179_cov_52.1132 . mRNA 20 2092 . - . ID=g13594.t1;Parent=g13594;Name=g13594.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 2065 2092 . - . ID=g13594.t1.utr5p1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 1648 2092 . - . ID=g13594.t1.exon1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 1648 2064 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 1437 1541 . - . ID=g13594.t1.exon2;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 1437 1541 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 1211 1315 . - . ID=g13594.t1.exon3;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 1211 1315 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 955 1119 . - . ID=g13594.t1.exon4;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 955 1119 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 716 844 . - . ID=g13594.t1.exon5;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 716 844 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 464 610 . - . ID=g13594.t1.exon6;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 464 610 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 204 345 . - . ID=g13594.t1.exon7;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 204 345 . - 0 ID=cds.g13594.t1;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . exon 20 102 . - . ID=g13594.t1.exon8;Parent=g13594.t1 NODE_314_length_27179_cov_52.1132 . CDS 20 102 . - 2 ID=cds.g13594.t1;Parent=g13594.t1;3_prime_partial=true #PROT g13594.t1 g13594 MGRDKRGRPTAAPASDGDGGGGAAQGSAGQQQLAAILRRRSVEVGMGASAGAREGAHPLASQSSQAQLGLPPLPARSSSGSLQGNAAAAGAGRLAIPHSYTVLATPNAYRDLGRSDMRRILRMVTFLDDYATMTKAQRLEILREEDTPENAEKRRTVAAIEIQRRWRGFWTRAMLHDLTDGHSSIFPLHTRSRFADSEQGLRDVKTPPLICREYLEAKYEDYLQRGKEIIRKSIFSPPFTFEGFCASLIQAWWKMLKQRRAYKQILIARKVAALVIERAWIRHCRRFKAPSRDNAVRIIQRAWRRSVLRHLFRCYRDLVTFRERGDPAVLLRCINPREAQLLDAASGAHVRFRLGGLTFPPTIYYKIFTHHTVVDLCANSPRDYSSNSNKLELPKTRHNRTTKVSKSGAKDSSARWYKRIENNGWRPVSYG # PASA_UPDATE: g13599.t1, single gene model update, valid-1, status:[pasa:asmbl_5627,status:12], valid-1 NODE_314_length_27179_cov_52.1132 . gene 11200 15877 . - . ID=g13599;Name=g13599.t1 NODE_314_length_27179_cov_52.1132 . mRNA 11200 15877 . - . ID=g13599.t1;Parent=g13599;Name=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 15740 15877 . - . ID=g13599.t1.exon1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 15740 15877 . - 0 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 14987 15560 . - . ID=g13599.t1.exon2;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 14987 15560 . - 0 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 14545 14676 . - . ID=g13599.t1.exon3;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 14545 14676 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 14172 14372 . - . ID=g13599.t1.exon4;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 14172 14372 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 13957 14079 . - . ID=g13599.t1.exon5;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 13957 14079 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 13738 13822 . - . ID=g13599.t1.exon6;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 13738 13822 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 13335 13436 . - . ID=g13599.t1.exon7;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 13335 13436 . - 1 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 13045 13223 . - . ID=g13599.t1.exon8;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 13045 13223 . - 1 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 12528 12908 . - . ID=g13599.t1.exon9;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 12528 12908 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 12292 12432 . - . ID=g13599.t1.exon10;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 12292 12432 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 11985 12082 . - . ID=g13599.t1.exon11;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 11985 12082 . - 2 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . exon 11200 11862 . - . ID=g13599.t1.exon12;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . CDS 11728 11862 . - 0 ID=cds.g13599.t1;Parent=g13599.t1 NODE_314_length_27179_cov_52.1132 . three_prime_UTR 11200 11727 . - . ID=g13599.t1.utr3p1;Parent=g13599.t1 #PROT g13599.t1 g13599 MSRRRGGGASDSGIDSGSGDGGEAALVKARAEAAVAGLWDNFFASEKRRDASLRAEFISAAVGLATTRGALAQLEKAAYSEEASALFARKCASPAQPTKAATASAKTAPKTAPTTAPKTSPKTASANAKTAVKSTRRGEQSISEEPSAKRARCDDGASAAHAHGGGGSADRPTHAAASAFAKEKGSAAGGNRRDGGKVGKESKESKEDKSAKSGRVELSGTYRHACKAPDAQSASLGDPADYEPNASYYRAHMFCDSVADRSERVPVYACAFEPVDNDPSSGTTHVFATAGGSVVNVCDAALCLTRGTDMRVSPVILRYKCPREFFFAVAWTVFRTPSGERVPVLAAGGDHGVVHLISPTLDVKYETLPKHQKAIFHIEFLRSNAHLMLSGSQDGCVVLWSIVAPSVAAATTGGMRSVALALFSCNAPVNAISAAPDGSHFLAGCDDSTIQRWNIDPQYVARAAQLQKQGGSVVDAASKAVAEKHEDVPADVASVHPPPQAPQQRAQSDEHLSSPVPAKRNPGRPRKETTVASSGGGNPGTGLTAHDAQTAPADFAASVGDARGAVAAKRKPGRPKKVADEHRVPNAAAAAAGDATAKRKVGRPRKTPTEEHDEPESLYDTLHDANVDFVAYIDARTVVSKAGCEGRMVLWTEESAPNGKHTARIVRQLEYTRSTEFFMKGKLTPDGRFVIVGDDKGDVLIYNIQNALARPGDTTPHVPAVLRGPQFDEFRAPIRDVCVSSDGRFIVAVSDINLISVWRRGD* # PASA_UPDATE: g13597.t1, single gene model update, valid-1, status:[pasa:asmbl_5626,status:3], valid-1 NODE_314_length_27179_cov_52.1132 . gene 7628 10164 . - . ID=g13597;Name=g13597.t1 NODE_314_length_27179_cov_52.1132 . mRNA 7628 10164 . - . ID=g13597.t1;Parent=g13597;Name=g13597.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 9784 10164 . - . ID=g13597.t1.utr5p1;Parent=g13597.t1 NODE_314_length_27179_cov_52.1132 . exon 9431 10164 . - . ID=g13597.t1.exon1;Parent=g13597.t1 NODE_314_length_27179_cov_52.1132 . CDS 9431 9783 . - 0 ID=cds.g13597.t1;Parent=g13597.t1 NODE_314_length_27179_cov_52.1132 . exon 7628 9271 . - . ID=g13597.t1.exon2;Parent=g13597.t1 NODE_314_length_27179_cov_52.1132 . CDS 7711 9271 . - 1 ID=cds.g13597.t1;Parent=g13597.t1 NODE_314_length_27179_cov_52.1132 . three_prime_UTR 7628 7710 . - . ID=g13597.t1.utr3p1;Parent=g13597.t1 #PROT g13597.t1 g13597 MDTIGRRSGYLQKQGGNIKSWKRRWFILHIDADGGDDEPMTRSFSPGQLLDQSRRFAVRGATLRYYKGADGSLHEALGVINMADCVVIEDAELALKKPNSFRLVTPTRTYIFIAENRREADEWIGSLTRVVQHLRVGRTGSAMSLATDVSQSFSGTLSSTGDIGASVTRGHGFSPSAVSAMASERIADRESSDVDDSAEEGDDGGVTSSLVAAQAPGAPVDGGGVPIAHSSAPHHAAHGGSFGSDDSSTGHSYGHSTHLPSHPPSHPSSLPPSARSSVALSRDILLQQGGLGSPLLSSQGGIRMSLQRGMDPLVLSPILSGASTPGRPGSISLPQPTVLGSTGADDVRGFLLKKKEGKNWKRRWCVLTGRSLSYFKAEISEVAQGAIDIESGTTVSDADADTRKPNSFKICTGGTTYYFVAETVHDKDLWMNGLQTIARLAASVAELVALSVPGALMSADASIGTLSAENCVVRGQGVESGVVGIESAFVIEARDGAGNLRGGRSDPFVVKINGPFDAARPEARIKNNCDGTYRVAYTCESEGDYVVAITVDGNHVADSPYYAPHDDTGTAGDRRSGSTSSNGSAVSGMGTPGSFMSLPRKLLQERHSVNAKQLHAQHQRDNNASIQRAFLDYLAAP* # PASA_UPDATE: g13595.t1, single gene model update, valid-1, status:[pasa:asmbl_5630,status:3], valid-1 NODE_314_length_27179_cov_52.1132 . gene 2420 3871 . + . ID=g13595;Name=g13595.t1 NODE_314_length_27179_cov_52.1132 . mRNA 2420 3871 . + . ID=g13595.t1;Parent=g13595;Name=g13595.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 2420 2468 . + . ID=g13595.t1.utr5p1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . exon 2420 2552 . + . ID=g13595.t1.exon1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . CDS 2469 2552 . + 0 ID=cds.g13595.t1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . exon 2669 2797 . + . ID=g13595.t1.exon2;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . CDS 2669 2797 . + 0 ID=cds.g13595.t1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . exon 2905 3088 . + . ID=g13595.t1.exon3;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . CDS 2905 3088 . + 0 ID=cds.g13595.t1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . exon 3239 3390 . + . ID=g13595.t1.exon4;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . CDS 3239 3390 . + 2 ID=cds.g13595.t1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . exon 3480 3871 . + . ID=g13595.t1.exon5;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . CDS 3480 3815 . + 0 ID=cds.g13595.t1;Parent=g13595.t1 NODE_314_length_27179_cov_52.1132 . three_prime_UTR 3816 3871 . + . ID=g13595.t1.utr3p1;Parent=g13595.t1 #PROT g13595.t1 g13595 MIERVLAVLLLATLAWSGGVSSYKPVLLMHGIDDNCGSLETLAGYIREAHPGTLAIPLPLFQDRPDSWLALWFQAEVVSAYISTLTANNASFAEGYHLVCHSQGALLCRAVLQLSDDHKCDTFVSLAGPLMGEYGPYDFLQNYYPNITVPNLWRLLYTDVLQDTVSAANLWHDPFPEHGYLTKNKFLPAINNEVEGKYDARYRTNFARLRKLALFISPADESIFPWQSAIFGFYDSSGSNVVEMRDQDVYLKDLFGLKTLDADGRILQVVLDNKGHEDWIYDRELFTYYEPLLV* # PASA_UPDATE: g13601.t1, single gene model update, valid-1, status:[pasa:asmbl_5633,status:3], valid-1 NODE_314_length_27179_cov_52.1132 . gene 21301 26298 . + . ID=g13601;Name=g13601.t1 NODE_314_length_27179_cov_52.1132 . mRNA 21301 26298 . + . ID=g13601.t1;Parent=g13601;Name=g13601.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 21301 21619 . + . ID=g13601.t1.utr5p1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 21301 21817 . + . ID=g13601.t1.exon1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 21620 21817 . + 0 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 22001 22167 . + . ID=g13601.t1.exon2;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 22001 22167 . + 0 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 22512 23156 . + . ID=g13601.t1.exon3;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 22512 23156 . + 1 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 23710 23766 . + . ID=g13601.t1.exon4;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 23710 23766 . + 1 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 24052 24356 . + . ID=g13601.t1.exon5;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 24052 24356 . + 1 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 24819 25000 . + . ID=g13601.t1.exon6;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 24819 25000 . + 2 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 25512 25672 . + . ID=g13601.t1.exon7;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 25512 25672 . + 0 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . exon 25866 26298 . + . ID=g13601.t1.exon8;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . CDS 25866 26139 . + 1 ID=cds.g13601.t1;Parent=g13601.t1 NODE_314_length_27179_cov_52.1132 . three_prime_UTR 26140 26298 . + . ID=g13601.t1.utr3p1;Parent=g13601.t1 #PROT g13601.t1 g13601 MVALTLPRLGIRRNAAIALLILTQLCIVLYLKRDTMGYGPGGSTDGIDDRSVDAEMETCLGSLKPQVKMPRRGPITYAVHGKTPLTSVMDLKSRGWKPQLNADQPAVVLLTTYKDWKRMSAKYLDGAHFVNLISNSYHLAFGPIGLATKQATSHQMGCQFNQLPFVLPAYDLSMVGRCAHFVEERFETDENDDSEANAGINPVSAWRFVLNSEFWMWADDDTNMDRQLAAAASSNNAHAADPQTPAAARNGSASVDDEEGDHDGEAAPPVSPSRVVPVGYALTHAGLVVRSSRLFELLGRPNGCETLERQRLAYPHPPQNLFVQKCLAMPMLIGRRRFFIRSYLLIASTSPYMVFRRDGYVQRFVDQFDPDGLVDVCDHAFDGKRRALIGGQGDGPAFAAKSSSAQADKWKYPGVDLAPDAAQYEERKVGGRATFNEGMLTLDMEQFEKQFLDSQEFEAGDYATLQKRLRHIERFVFEGSRAKLRRRRGSFQLVTVDIGLESDGNPMLLSVDINPTLQVSLSVWVQTHSEKMFKESMDLVMDVNMKPWDYATMTYGATKFGFEIILNERMEKCGPPGENLFASYDFCIYEGTPVDTNSPVTDGGEDTTPNSGANNGPVANADAPAGSAEGDDGDGPADEGDADAASGAGAGSSESEGEQARK* # ORIGINAL: g13600.t1 original gene structure, not modified by PASA NODE_314_length_27179_cov_52.1132 AUGUSTUS gene 16445 20853 . - . ID=g13600;Name=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS mRNA 16445 20853 . - . ID=g13600.t1;Parent=g13600;Name=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 20331 20853 . - . ID=g13600.t1.exon1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 20331 20853 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 20053 20183 . - . ID=g13600.t1.exon2;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 20053 20183 . - 2 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 19642 19821 . - . ID=g13600.t1.exon3;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 19642 19821 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 19383 19458 . - . ID=g13600.t1.exon4;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 19383 19458 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 19141 19239 . - . ID=g13600.t1.exon5;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 19141 19239 . - 2 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 18872 18981 . - . ID=g13600.t1.exon6;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 18872 18981 . - 2 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 18530 18684 . - . ID=g13600.t1.exon7;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 18530 18684 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 18201 18307 . - . ID=g13600.t1.exon8;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 18201 18307 . - 1 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 17856 18053 . - . ID=g13600.t1.exon9;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 17856 18053 . - 2 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 17553 17692 . - . ID=g13600.t1.exon10;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 17553 17692 . - 2 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 17314 17403 . - . ID=g13600.t1.exon11;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 17314 17403 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 17091 17149 . - . ID=g13600.t1.exon12;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 17091 17149 . - 0 ID=cds.g13600.t1;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 16445 16970 . - . ID=g13600.t1.exon13;Parent=g13600.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 16445 16970 . - 1 ID=cds.g13600.t1;Parent=g13600.t1 #PROT g13600.t1 g13600 MADPNPPLKKLSRLTSNVDIDNLGDSLPRTYFRSESPAAPLGHHAPAEQPDLRTTLSPGLFVDDGVHVSPRLTSRSASDKDLLVSHGPQLLRRSLNAASELVVECSGFITETTGDAESASEGGGAGNAVGGPMRRAYSVQQLDMSFRARHGQQLMAFEHYDHHANYYRRHFYAREHQNFLGFDHTGHPVAVSLKRESDPRAADDEDKGRYRGIIRTLEGGDIRMTLPESSVHIRSKLRLKATAKDIIVSMAPSVHISKLQLVTDPKIHEMLMKLDEQLLVRQYKFGVMYCAAGQSSEEDMYNNMSPSKFFTDFLGVIGETVKLRGFCGFKAGLDVKSDSTGTESVYTRLYDGDVEVMFHVSTMLPSTPANRQQLQRKRHIGNDIVTIIFQDPGAPAFSPLVIRSHFQHIFIVVRPVVSAAGTKYNVAVSRFDDVPSFGPPLPNPPLFEPNSKFREFLLHKLINAENAAYKAPKFGAMAQRTRTMLMADLVSSFGILPPAPNETCARQSSTGATGAAAQPVSLSPGGVDHQKAARESSFEMLRRQSGRLFAITKSRRSKSPTNRKRAQASWTAKMPDPAAPSSSLCISVNIGPDALCIQDDKGKVSYCSWPIDMVAATVLDSKRIRLACNQDGFEVATSDGEAMMRQIDACAGRDGSPRGSATLSPAHVRRTSGGHSPSAVSASVPMMPALGSPARHRLSSGGSVASSVGGVGGQQSRRTSSNASDAQVALLDESSLLEALAGRNAELNQRLEDALHERDELRCRLDEALRSIAKAKNAAGGYAASLDALVDADEVEV* # ORIGINAL: g13602.t1 original gene structure, not modified by PASA NODE_314_length_27179_cov_52.1132 AUGUSTUS gene 26792 27019 . - . ID=g13602;Name=g13602.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS mRNA 26792 27019 . - . ID=g13602.t1;Parent=g13602;Name=g13602.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 26792 27019 . - . ID=g13602.t1.exon1;Parent=g13602.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 26792 27019 . - 0 ID=cds.g13602.t1;Parent=g13602.t1 #PROT g13602.t1 g13602 MPINDSTTYHTQVLVSKSTCDIVKDRIELKYVASRKFKGKAIEIDIYEPLRLLDVPDAKAIPATASGSSSPSKAR* # PASA_UPDATE: g13596.t1, single gene model update, valid-1, status:[pasa:asmbl_5631,status:12], valid-1 # PASA_UPDATE: g13596.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5632,status:12], valid-1 NODE_314_length_27179_cov_52.1132 . gene 4260 7603 . + . ID=g13596;Name=g13596.t1 NODE_314_length_27179_cov_52.1132 . mRNA 4260 7603 . + . ID=g13596.t1;Parent=g13596;Name=g13596.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 4260 4316 . + . ID=g13596.t1.utr5p1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 4260 4347 . + . ID=g13596.t1.exon1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 4317 4347 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 4498 4576 . + . ID=g13596.t1.exon2;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 4498 4576 . + 2 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 4700 4750 . + . ID=g13596.t1.exon3;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 4700 4750 . + 1 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 4876 4972 . + . ID=g13596.t1.exon4;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 4876 4972 . + 1 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 5416 5565 . + . ID=g13596.t1.exon5;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 5416 5565 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 5800 5928 . + . ID=g13596.t1.exon6;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 5800 5928 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 6097 6163 . + . ID=g13596.t1.exon7;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 6097 6163 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 6248 6301 . + . ID=g13596.t1.exon8;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 6248 6301 . + 2 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 6513 6644 . + . ID=g13596.t1.exon9;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 6513 6644 . + 2 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 6780 6868 . + . ID=g13596.t1.exon10;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 6780 6868 . + 2 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 7044 7178 . + . ID=g13596.t1.exon11;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 7044 7178 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . exon 7371 7603 . + . ID=g13596.t1.exon12;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . CDS 7371 7460 . + 0 ID=cds.g13596.t1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . three_prime_UTR 7461 7603 . + . ID=g13596.t1.utr3p1;Parent=g13596.t1 NODE_314_length_27179_cov_52.1132 . mRNA 4260 7603 . + . ID=g13596.t1.1.5b6be70b;Parent=g13596;Name=g13596.t1 NODE_314_length_27179_cov_52.1132 . five_prime_UTR 4260 4316 . + . ID=g13596.t1.1.5b6be70b.utr5p1;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 4260 4347 . + . ID=g13596.t1.1.5b6be70b.exon1;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 4317 4347 . + 0 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 4498 4576 . + . ID=g13596.t1.1.5b6be70b.exon2;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 4498 4576 . + 2 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 4700 4750 . + . ID=g13596.t1.1.5b6be70b.exon3;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 4700 4750 . + 1 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 4876 4972 . + . ID=g13596.t1.1.5b6be70b.exon4;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 4876 4972 . + 1 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 5416 5565 . + . ID=g13596.t1.1.5b6be70b.exon5;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 5416 5565 . + 0 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 5800 5928 . + . ID=g13596.t1.1.5b6be70b.exon6;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 5800 5928 . + 0 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 6097 6163 . + . ID=g13596.t1.1.5b6be70b.exon7;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 6097 6163 . + 0 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 6248 6301 . + . ID=g13596.t1.1.5b6be70b.exon8;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 6248 6301 . + 2 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 6513 6644 . + . ID=g13596.t1.1.5b6be70b.exon9;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 6513 6644 . + 2 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 6780 7178 . + . ID=g13596.t1.1.5b6be70b.exon10;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . CDS 6780 6961 . + 2 ID=cds.g13596.t1.1.5b6be70b;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . exon 7371 7603 . + . ID=g13596.t1.1.5b6be70b.exon11;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . three_prime_UTR 6962 7178 . + . ID=g13596.t1.1.5b6be70b.utr3p1;Parent=g13596.t1.1.5b6be70b NODE_314_length_27179_cov_52.1132 . three_prime_UTR 7371 7603 . + . ID=g13596.t1.1.5b6be70b.utr3p2;Parent=g13596.t1.1.5b6be70b #PROT g13596.t1 g13596 MALRGVFVRQTPRVGLGAAVSRVLSTGSTVSWRDSVRDGLDNVVGKTPLIRLKRLSEETGCNIVAKAEFMSGGGSVKDRAALFLIKDAEERGLLQPGGTVVEGTAGNTGIGLAHICNSRGYKCVIYMPDTQSKEKMDILRVLGAEVRAVPAVAFTDPNNYNHQAKRFAESIPNAVWTNQFDNTANRRAHYATTGPEIWEQTGGRVDAFTCATGTGGTLAGTAMYLKERNKNVRIALADPMGSVLAAWIMRGILERTGTGSITEGIGQGRVTDNLKGAPIDSAFTVDDRRSVEMTYRLLHEEGIFVGASSGLNVAAAVQVARELGPGHTVATVLCDSGQRYFARLFNQKWLESKGLLDAIHEEHRRFP* #PROT g13596.t1.1.5b6be70b g13596 MALRGVFVRQTPRVGLGAAVSRVLSTGSTVSWRDSVRDGLDNVVGKTPLIRLKRLSEETGCNIVAKAEFMSGGGSVKDRAALFLIKDAEERGLLQPGGTVVEGTAGNTGIGLAHICNSRGYKCVIYMPDTQSKEKMDILRVLGAEVRAVPAVAFTDPNNYNHQAKRFAESIPNAVWTNQFDNTANRRAHYATTGPEIWEQTGGRVDAFTCATGTGGTLAGTAMYLKERNKNVRIALADPMGSVLAAWIMRGILERTGTGSITEGIGQGRVTDNLKGAPIDSAFTVDDRRSVEMVGSIRHWCKCESIHRLPILTVRAVQFPAYC* # ORIGINAL: g13598.t1 original gene structure, not modified by PASA NODE_314_length_27179_cov_52.1132 AUGUSTUS gene 10439 11442 . + . ID=g13598;Name=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS mRNA 10439 11442 . + . ID=g13598.t1;Parent=g13598;Name=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 10439 10540 . + . ID=g13598.t1.exon1;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 10439 10540 . + 0 ID=cds.g13598.t1;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 10650 10715 . + . ID=g13598.t1.exon2;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 10650 10715 . + 0 ID=cds.g13598.t1;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 10854 10898 . + . ID=g13598.t1.exon3;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 10854 10898 . + 0 ID=cds.g13598.t1;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 11056 11134 . + . ID=g13598.t1.exon4;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 11056 11134 . + 0 ID=cds.g13598.t1;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS exon 11324 11442 . + . ID=g13598.t1.exon5;Parent=g13598.t1 NODE_314_length_27179_cov_52.1132 AUGUSTUS CDS 11324 11442 . + 2 ID=cds.g13598.t1;Parent=g13598.t1 #PROT g13598.t1 g13598 MSDSDRPDADSDAREMTAAAATTGTLHELETAEKAVVDLLRCAGKAMEVLGKEGSESDFQDYAAEYVLHVGVVRDILQRQIERLATVSVMPNELTAYGAEKGASIAFRTLGVVAQQLGAIATAGPHTDHTAADGGR* # PASA_UPDATE: g6293.t1, single gene model update, valid-1, status:[pasa:asmbl_5799,status:12], valid-1 NODE_3265_length_3880_cov_37.334 . gene 1361 3524 . - . ID=g6293;Name=g6293.t1 NODE_3265_length_3880_cov_37.334 . mRNA 1361 3524 . - . ID=g6293.t1;Parent=g6293;Name=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 3507 3524 . - . ID=g6293.t1.exon1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 3507 3524 . - 0 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 2841 2969 . - . ID=g6293.t1.exon2;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 2841 2969 . - 0 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 2561 2717 . - . ID=g6293.t1.exon3;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 2561 2717 . - 0 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 2181 2308 . - . ID=g6293.t1.exon4;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 2181 2308 . - 2 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 1773 1907 . - . ID=g6293.t1.exon5;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 1773 1907 . - 0 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . exon 1361 1599 . - . ID=g6293.t1.exon6;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . CDS 1513 1599 . - 0 ID=cds.g6293.t1;Parent=g6293.t1 NODE_3265_length_3880_cov_37.334 . three_prime_UTR 1361 1512 . - . ID=g6293.t1.utr3p1;Parent=g6293.t1 #PROT g6293.t1 g6293 MQVINKFVAGLGLPAGYSYVDVYGLDDDMIAMVPEPVLSVLLLFPITSKYEQFRLDEQRDIESRGQVLAPSVYFMTQTIENACGTIGIIHSIANNSNNIPLGGFLKEFVASTKSMTPAQRGAHLEGAKEISVAHHESASEGQTEAPSLDADTNLHFIAFADVDGHIYEFDGRKPFPINHGTRTSDSLLRDAAPIIQKFMQRDPEQVNFSMLALVKDE* # ORIGINAL: g9157.t1 original gene structure, not modified by PASA NODE_585_length_20581_cov_39.752 AUGUSTUS gene 2373 4307 . - . ID=g9157;Name=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS mRNA 2373 4307 . - . ID=g9157.t1;Parent=g9157;Name=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS exon 4034 4307 . - . ID=g9157.t1.exon1;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS CDS 4034 4307 . - 0 ID=cds.g9157.t1;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS exon 3164 3293 . - . ID=g9157.t1.exon2;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS CDS 3164 3293 . - 2 ID=cds.g9157.t1;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS exon 2804 3005 . - . ID=g9157.t1.exon3;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS CDS 2804 3005 . - 1 ID=cds.g9157.t1;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS exon 2373 2543 . - . ID=g9157.t1.exon4;Parent=g9157.t1 NODE_585_length_20581_cov_39.752 AUGUSTUS CDS 2373 2543 . - 0 ID=cds.g9157.t1;Parent=g9157.t1 #PROT g9157.t1 g9157 MARRAGRGVSNVMQNLAKSVERGDYYEAHQMYRTVYFRSMTQKQYEDAIGLLLSGALLLLDKGQQTSGGDLAVLLVETYADTKLAVDEKALEDMAAQGQAHLVHAGEAGIAPLADSVAKSAPELRSILLARIVLQYLSQENIRLASLAFKTITDKIPSLSDSDVANFLRYLLQAVTRDAAALFKLLRQRYSSVIAKDPSLDQLLDKIGKQIFNIAPAGPGGLLGNLMKSFMGGMDFGFDGDDDDSDSRALPASSGDLD* # PASA_UPDATE: g9159.t1, single gene model update, valid-1, status:[pasa:asmbl_8321,status:3], valid-1 NODE_585_length_20581_cov_39.752 . gene 13948 19261 . + . ID=g9159;Name=g9159.t1 NODE_585_length_20581_cov_39.752 . mRNA 13948 19261 . + . ID=g9159.t1;Parent=g9159;Name=g9159.t1 NODE_585_length_20581_cov_39.752 . five_prime_UTR 13948 13996 . + . ID=g9159.t1.utr5p1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 13948 14104 . + . ID=g9159.t1.exon1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 13997 14104 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 14458 14610 . + . ID=g9159.t1.exon2;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 14458 14610 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 14773 14972 . + . ID=g9159.t1.exon3;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 14773 14972 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 15151 15515 . + . ID=g9159.t1.exon4;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 15151 15515 . + 1 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 15761 15896 . + . ID=g9159.t1.exon5;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 15761 15896 . + 2 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 16141 16293 . + . ID=g9159.t1.exon6;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 16141 16293 . + 1 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 16622 16775 . + . ID=g9159.t1.exon7;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 16622 16775 . + 1 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 17120 17233 . + . ID=g9159.t1.exon8;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 17120 17233 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 17505 17569 . + . ID=g9159.t1.exon9;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 17505 17569 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 17804 17918 . + . ID=g9159.t1.exon10;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 17804 17918 . + 1 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 18250 18327 . + . ID=g9159.t1.exon11;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 18250 18327 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 18508 18681 . + . ID=g9159.t1.exon12;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 18508 18681 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . exon 18971 19261 . + . ID=g9159.t1.exon13;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . CDS 18971 19138 . + 0 ID=cds.g9159.t1;Parent=g9159.t1 NODE_585_length_20581_cov_39.752 . three_prime_UTR 19139 19261 . + . ID=g9159.t1.utr3p1;Parent=g9159.t1 #PROT g9159.t1 g9159 MAPNMSKLARYGALAGGLSVVLSLYYKSRAKKAREQREVDPVAASIHAANAKKDRVAVDAEFFRRLWRLLKIIVPGPLSPEAGYIGLVCFSMVARTYCDLWMIRISTAIERTIISRDNAGFRKGLAQFFASMVPIAVITNLLKYGLNELGLRFRTRLTRHLYEQYLKGFTYYKINNLDNRISNPDQLLTQDVEKFCNSIAELFSNISKPILDIVIYARKLTGAIGGQGPATMMIYLAMSGLVLTRLRRPTGRYTVQEQRLEGEFRFVNSRLITNSEEIAFYNGNERERLVINQSFARLVRLLRTAMQFRFTMGCVDSIIAKYFATVVGFYVVSRPFLNLGDKRHSNMAHNEIMEDYYRSGRMLINLATATGRLVLAGRELTRLAGFTARVTDLMDVLRDLNSGKYVRTMVSNEGEGSADRAGLNLAPNNGRIIEQDNIIRFDKVPLVTPNGDLLVRALSFEVQSGCNVLVCGPNGCGKSSLFRHLGELWPLFGGVLTKPAKEKLFYVPQRPYMTLGTLRDQITYPHSDDERRKRGVADDELKEYLEQVHLGYLVEREGGLDSVQDWMDVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGFMYARCREVGITLFTVSHRKSLWKYHDYALQFDGRGQYEFKRIDASNADDQFGS* # PASA_UPDATE: g9156.t1, single gene model update, valid-1, status:[pasa:asmbl_8322,status:12], valid-1 NODE_585_length_20581_cov_39.752 . gene 120 1682 . - . ID=g9156;Name=g9156.t1 NODE_585_length_20581_cov_39.752 . mRNA 120 1682 . - . ID=g9156.t1;Parent=g9156;Name=g9156.t1 NODE_585_length_20581_cov_39.752 . five_prime_UTR 1558 1682 . - . ID=g9156.t1.utr5p1;Parent=g9156.t1 NODE_585_length_20581_cov_39.752 . exon 1302 1682 . - . ID=g9156.t1.exon1;Parent=g9156.t1 NODE_585_length_20581_cov_39.752 . CDS 1302 1557 . - 0 ID=cds.g9156.t1;Parent=g9156.t1 NODE_585_length_20581_cov_39.752 . exon 120 1049 . - . ID=g9156.t1.exon2;Parent=g9156.t1 NODE_585_length_20581_cov_39.752 . CDS 120 1049 . - 2 ID=cds.g9156.t1;Parent=g9156.t1;3_prime_partial=true #PROT g9156.t1 g9156 MSHPSFRPSGRSVTRLFVLFCLLFCGAIRAEKTLEVSDVAAAFWLRNIEFLDFTMGAIESCTGESPMTNVTAIGTELDLVGLFDFSTKRPALYTVTLANLTRDYAVPLGAFREHSQPYRLFRLAKYTLVVACNGVPTWIADGDAQELVSLGNCDEIVLRRTVAGRLLYITPGTHGEETTMQVYSPGEFMQRTFKEHEIVDMPWGHERALPTALYASAAFVFHRGDDAEDEYDPEEDGDDSDDGTDAEEGDNEDDWDDVEGDWDDADATDDSSNSGVRRDVRVNRRGRTSRNAVNGKKARSDNALVRSGRRQREATRAGHSGRRSSARDASARHGRDVRVSAESVRGEQAQRQRRSVYDLIDVSMFVDAGWVAAPMRLDALFTVGTHPGFIGDHIM # PASA_UPDATE: g9158.t1, single gene model update, valid-1, status:[pasa:asmbl_8320,status:3], valid-1 NODE_585_length_20581_cov_39.752 . gene 5034 13365 . + . ID=g9158;Name=g9158.t1 NODE_585_length_20581_cov_39.752 . mRNA 5034 13365 . + . ID=g9158.t1;Parent=g9158;Name=g9158.t1 NODE_585_length_20581_cov_39.752 . five_prime_UTR 5034 5208 . + . ID=g9158.t1.utr5p1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . five_prime_UTR 5633 5653 . + . ID=g9158.t1.utr5p2;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 5034 5208 . + . ID=g9158.t1.exon1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 5633 5766 . + . ID=g9158.t1.exon2;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 5654 5766 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 6095 6150 . + . ID=g9158.t1.exon3;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 6095 6150 . + 1 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 6391 6465 . + . ID=g9158.t1.exon4;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 6391 6465 . + 2 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 6843 6913 . + . ID=g9158.t1.exon5;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 6843 6913 . + 2 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 7122 7234 . + . ID=g9158.t1.exon6;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 7122 7234 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 7452 7537 . + . ID=g9158.t1.exon7;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 7452 7537 . + 1 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 7864 7946 . + . ID=g9158.t1.exon8;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 7864 7946 . + 2 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 8074 8293 . + . ID=g9158.t1.exon9;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 8074 8293 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 8600 8697 . + . ID=g9158.t1.exon10;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 8600 8697 . + 2 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 8952 9107 . + . ID=g9158.t1.exon11;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 8952 9107 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 9320 9462 . + . ID=g9158.t1.exon12;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 9320 9462 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 9639 10434 . + . ID=g9158.t1.exon13;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 9639 10434 . + 1 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 10670 10795 . + . ID=g9158.t1.exon14;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 10670 10795 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 10950 11024 . + . ID=g9158.t1.exon15;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 10950 11024 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 11190 11289 . + . ID=g9158.t1.exon16;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 11190 11289 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 11463 11547 . + . ID=g9158.t1.exon17;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 11463 11547 . + 2 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 11872 12021 . + . ID=g9158.t1.exon18;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 11872 12021 . + 1 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 12193 12541 . + . ID=g9158.t1.exon19;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 12193 12541 . + 1 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . exon 12823 13365 . + . ID=g9158.t1.exon20;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . CDS 12823 12978 . + 0 ID=cds.g9158.t1;Parent=g9158.t1 NODE_585_length_20581_cov_39.752 . three_prime_UTR 12979 13365 . + . ID=g9158.t1.utr3p1;Parent=g9158.t1 #PROT g9158.t1 g9158 MPPENASAGAGAGGANASNAPVTWEALKNEHGLTYYKSSKNGALRWSDPRAKQAVFEEHEDVKYSNYRIVLKLNAIQIRTKLTRVNVRYAIESFHQHAVSGRSNRLLDIPTMRSCLTTMYENAPDAQHTADLAVHFFLCVYDSGFRARIKAMDFQTAIIALCSGSVEDKAKYAFTVADDNSDGYVTRSDAEVFLVSLQKLIRFIDEDMNIGATKEGIVRDVNAGFKQIAAANSNPEDNDLLTEEQFVGWITGPALRQVSWFITLARYVIADATIHTGVTCHVCGQSDFRGLRYSCIKCFGVDLCQTCFFHGKEHKKHKSYHPFIEYCLKKGVGSHSKDFMRRVRNLNKSYKHKRLRTDPFGRLETDTGFIPTGSSPTVIEAVADKDAIGPYDAEAHRLIAEYAGMLSGTVSVGAGVHRHDLEEKPVPLYRAAPPYVEVAHPPQDKASEDDAEAAANPNDDIPAYRNAPSYDQAAAMKNAQLLRDGEVTAASGIPEYKQAPSYDAALAGFAAPAAPPHNNGIPEYKQAPGYDQVYSLKTKKGQSPPPGGPIIPDYKTAPTYDQVAALRNAKVAAHKAAGQPIDHIDTATHVGRSTDAYDADLAETSLGPAVDGLGMAIGAAIGVGLGAAAVVAAVASSSQEEEDAKMARELEEAERQRAAREAQEKADEELALAMAAELELLQASEDIDSMVQQLSGATTDEGEVGFGTQLLQAAQSIALSTSELVRTATERRKQQLSEADPAKRASLVLLAKNMHDSVKTLVDTIRSDESGQASASQLLTSAQAVQNTAGALMDHIDADPAEKKKAKRARVQFEELVQFAEQEIDDDADASNRSSRSSVRTSMKPIRDEGDEINPLTGLRSIGGTLSQRLTLRRKNIADKGVTDRWLRIKFAFEEDAGIDLSELDDEEVVTDLPKKLTDGVLALTLANAFLEKPKYKPNVPKEGQAKMPHIRVMENVDRFLQACKELGVPERDLCSYSDMIDGNRPVRVLACMEALLVNAAKSLSRRNSVVSNSSN* # PASA_UPDATE: g6343.t1, single gene model update, valid-1, status:[pasa:asmbl_9502,status:12], valid-1 NODE_8111_length_387_cov_140.734 . gene 2 387 . - . ID=g6343;Name=g6343.t1 NODE_8111_length_387_cov_140.734 . mRNA 2 387 . - . ID=g6343.t1;Parent=g6343;Name=g6343.t1 NODE_8111_length_387_cov_140.734 . five_prime_UTR 386 387 . - . ID=g6343.t1.utr5p1;Parent=g6343.t1 NODE_8111_length_387_cov_140.734 . exon 2 387 . - . ID=g6343.t1.exon1;Parent=g6343.t1 NODE_8111_length_387_cov_140.734 . CDS 5 385 . - 0 ID=cds.g6343.t1;Parent=g6343.t1;5_prime_partial=true NODE_8111_length_387_cov_140.734 . three_prime_UTR 2 4 . - . ID=g6343.t1.utr3p1;Parent=g6343.t1 #PROT g6343.t1 g6343 ANMPPKAGKKAEKKAGKAVAADATKDKKKRTKRRKESYAVYIYKVLKQVHPEVGISNKAMVIMNSFVTDIFERIAGEASRLAHYNKKSTITSREIQTAIRLLLPGELAKHAVSEGTKAVTKYTSTK* # PASA_UPDATE: g8695.t1, single gene model update, valid-1, status:[pasa:asmbl_1599,status:3], valid-1 NODE_1440_length_11276_cov_39.4687 . gene 3117 10160 . - . ID=g8695;Name=g8695.t1 NODE_1440_length_11276_cov_39.4687 . mRNA 3117 10160 . - . ID=g8695.t1;Parent=g8695;Name=g8695.t1 NODE_1440_length_11276_cov_39.4687 . five_prime_UTR 9805 10160 . - . ID=g8695.t1.utr5p1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 9751 10160 . - . ID=g8695.t1.exon1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 9751 9804 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 9358 9487 . - . ID=g8695.t1.exon2;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 9358 9487 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 8985 9042 . - . ID=g8695.t1.exon3;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 8985 9042 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 8602 8798 . - . ID=g8695.t1.exon4;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 8602 8798 . - 1 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 7863 8006 . - . ID=g8695.t1.exon5;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 7863 8006 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 7407 7529 . - . ID=g8695.t1.exon6;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 7407 7529 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 7087 7208 . - . ID=g8695.t1.exon7;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 7087 7208 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 6909 6966 . - . ID=g8695.t1.exon8;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 6909 6966 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 6514 6710 . - . ID=g8695.t1.exon9;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 6514 6710 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 6200 6317 . - . ID=g8695.t1.exon10;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 6200 6317 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 5849 5996 . - . ID=g8695.t1.exon11;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 5849 5996 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 5579 5627 . - . ID=g8695.t1.exon12;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 5579 5627 . - 1 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 5169 5301 . - . ID=g8695.t1.exon13;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 5169 5301 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 4792 4944 . - . ID=g8695.t1.exon14;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 4792 4944 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 4501 4590 . - . ID=g8695.t1.exon15;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 4501 4590 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 4188 4243 . - . ID=g8695.t1.exon16;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 4188 4243 . - 2 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . exon 3117 3860 . - . ID=g8695.t1.exon17;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . CDS 3768 3860 . - 0 ID=cds.g8695.t1;Parent=g8695.t1 NODE_1440_length_11276_cov_39.4687 . three_prime_UTR 3117 3767 . - . ID=g8695.t1.utr3p1;Parent=g8695.t1 #PROT g8695.t1 g8695 MGAKQGKPEKPDKHDKLKGEGSSGSIQRRSASSNDLAGEALSHSAGSHGSGSQSLKRPPMQTPSHAPISNTAPSVKGRSQAIQQQSGVTRSESDPNLASRPLPTPGVSSGGAVSNYNVVEKRGGPGGPSRPSTPGSIRLTRDLTVEESLDPTLFIALYDYESQVENGMSFKKGDHFKLLDSSNENWWQVQPRAGGVIGYVPSNYIASIKSVQKHAWFHGRIARSHAEHLLSSGINGSFLIRESESNQGEYSISVRYEGRMYHYRVGTEGNNCFITKEHQFSSLEELVQHHTKMADGLITVLKYPVGKKDKPTVFGVSHEDDKWEIDRMEINLGKKLGAGQYGEVYEGVWKKNVKVAVKTLKEESMELSDFIQEAAIMKKIKHSNLVQLLGVCTKELPYYILTEYMPKGNLLDFLRNPTERARLDPTILMFMASQVSAGMQYLEERNFIHRDLAARNCLVAENYKVKVADFGLSRLIEDEYTAREGAKFPIKWTAPEALLYNVFTTKSDVWAFGILLWEIATYGDSPYPGVELGLVLDKLEAGYRMPQPDGCPDEVYEVMLDCWKFDPATRPTFKDIRVRLETMFPNQGINEAVEKAAEIQERRKSMSVSAPPVSSRVSGASSSIAPPPGSPKPQVSPRPH* # ORIGINAL: g8694.t1 original gene structure, not modified by PASA NODE_1440_length_11276_cov_39.4687 AUGUSTUS gene 53 1547 . + . ID=g8694;Name=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS mRNA 53 1547 . + . ID=g8694.t1;Parent=g8694;Name=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS exon 53 223 . + . ID=g8694.t1.exon1;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS CDS 53 223 . + 0 ID=cds.g8694.t1;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS exon 632 773 . + . ID=g8694.t1.exon2;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS CDS 632 773 . + 0 ID=cds.g8694.t1;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS exon 969 1220 . + . ID=g8694.t1.exon3;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS CDS 969 1220 . + 2 ID=cds.g8694.t1;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS exon 1414 1547 . + . ID=g8694.t1.exon4;Parent=g8694.t1 NODE_1440_length_11276_cov_39.4687 AUGUSTUS CDS 1414 1547 . + 2 ID=cds.g8694.t1;Parent=g8694.t1 #PROT g8694.t1 g8694 HPTLCIVSEFMARGSLFDWFQRYEILTWPMRARFAVDAAKGMAYLHSATPPILHLDLVADFGLSALQEVRGSKMKATAKGTLLWMAPEVILGKSPTALSDVYSFGIVLWEMMASRPPYVYASKDSTLVHRVAVGISQRHVRPKPIPDDSPYLWVDLMRSCWGANPKDRPTFEAILAKLDFITTEVEENPNEWLEPLIPPYRRGDPESDFLEDFMFDLAEGPGEFYELDEDES* # ORIGINAL: g2982.t1 original gene structure, not modified by PASA NODE_15865_length_238_cov_0.932515_potentialcontaminant AUGUSTUS gene 52 238 . + . ID=g2982;Name=g2982.t1 NODE_15865_length_238_cov_0.932515_potentialcontaminant AUGUSTUS mRNA 52 238 . + . ID=g2982.t1;Parent=g2982;Name=g2982.t1 NODE_15865_length_238_cov_0.932515_potentialcontaminant AUGUSTUS exon 52 238 . + . ID=g2982.t1.exon1;Parent=g2982.t1 NODE_15865_length_238_cov_0.932515_potentialcontaminant AUGUSTUS CDS 52 238 . + 0 ID=cds.g2982.t1;Parent=g2982.t1 #PROT g2982.t1 g2982 VYRHVDFIEFESPRIVDRFIQYWRQSGGHQRLGYLYGKYSPHTDVPLGIKAMVMAIYEPPQE # ORIGINAL: g11539.t1 original gene structure, not modified by PASA NODE_3669_length_2991_cov_37.4458 AUGUSTUS gene 2301 2966 . + . ID=g11539;Name=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS mRNA 2301 2966 . + . ID=g11539.t1;Parent=g11539;Name=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS exon 2301 2416 . + . ID=g11539.t1.exon1;Parent=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS CDS 2301 2416 . + 0 ID=cds.g11539.t1;Parent=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS exon 2584 2875 . + . ID=g11539.t1.exon2;Parent=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS CDS 2584 2875 . + 1 ID=cds.g11539.t1;Parent=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS exon 2961 2966 . + . ID=g11539.t1.exon3;Parent=g11539.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS CDS 2961 2966 . + 0 ID=cds.g11539.t1;Parent=g11539.t1 #PROT g11539.t1 g11539 MPSPEGIMLRFPEDFKDNEYKLIELNDDVLKAIASHEGSVNIVGHADDEAVLCTEDATYTVKFADTSNTMLFLPASIQQRLSSPESAAGNATCDICGRLSEYIELRPTEPRIERVRSMLREGMYCGPEEEDTTGKKE* # ORIGINAL: g11538.t1 original gene structure, not modified by PASA NODE_3669_length_2991_cov_37.4458 AUGUSTUS gene 20 1711 . - . ID=g11538;Name=g11538.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS mRNA 20 1711 . - . ID=g11538.t1;Parent=g11538;Name=g11538.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS exon 274 1711 . - . ID=g11538.t1.exon1;Parent=g11538.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS CDS 274 1711 . - 0 ID=cds.g11538.t1;Parent=g11538.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS exon 20 88 . - . ID=g11538.t1.exon2;Parent=g11538.t1 NODE_3669_length_2991_cov_37.4458 AUGUSTUS CDS 20 88 . - 2 ID=cds.g11538.t1;Parent=g11538.t1 #PROT g11538.t1 g11538 MQSDMQSPCSRLPDATPTDADDYGADPFSLPELERSAPLARLKGRLLRQMQVRIAAAVDSRNVELLTQPLAPLVESIKRRAVHKARSTLTGKHDCYKLLSFMLFGLPEGSGVGQRGGRGGWVSRIKIVDASEDSWIVFELDAGDAKKKEDPFAAISLPKVRGLQRRYRIDEDIARSFLELTMLELGDVTMEAWRSKVRRRLGTDWTDASSESQVAHTPAASESSVVSARTLGRASGVVHGVDRHCAATTTDADASTALDGQSPCTTDTPGVGSLAASDANASDDIENPSHFGTDFHAASPDGWPGFDEASLSSEPTGILDGSLLGYARETTFGQNGVSLHTLLGENGLLVPQIAVTTTRRARVATAATLTEDASPFTLVSESESALSYCGDGDASLTDVSIDDILSIYRSPSDRGLGSPASIVYADGAQRARNGAVGFVAASPDLLPPDTGSAHFPPVQMDHNSPDGAALGLQVMANASGTILGSVERASSPAATSRKRRLD # ORIGINAL: g2965.t1 original gene structure, not modified by PASA NODE_5193_length_975_cov_84.8967_potentialcontaminant AUGUSTUS gene 1 975 . - . ID=g2965;Name=g2965.t1 NODE_5193_length_975_cov_84.8967_potentialcontaminant AUGUSTUS mRNA 1 975 . - . ID=g2965.t1;Parent=g2965;Name=g2965.t1 NODE_5193_length_975_cov_84.8967_potentialcontaminant AUGUSTUS exon 1 975 . - . ID=g2965.t1.exon1;Parent=g2965.t1 NODE_5193_length_975_cov_84.8967_potentialcontaminant AUGUSTUS CDS 1 975 . - 0 ID=cds.g2965.t1;Parent=g2965.t1 #PROT g2965.t1 g2965 ENCVSFGGGCFHAVDSANVSIEGGTSTDTRTSASGGFVWAGGRSRVNITGIYVRGATAENGGFAFATSDAFLSLASVSVKGATANSDGAAVFLNGRAACTVTNSHFWRSDAGRSGGAFLASSSAKLSIANTTVSECHAGASGGALAVTGDASVVLLGFIVLDSKSDSDGGAIYATGNVVVNVTSVVASGTAATGGSGGFLALDGNAEVTVTQSLVAGAECSAVGGAISTISRSVVRVSDSTFTHVSSQLAGGFVHQKGTSSVYLTSVEVQNAWTDGIAAGIAVRGGAQVYLVNVTLFEARRTPGVGIGWLSAPTGAIGEYTNVRC # PASA_UPDATE: g7544.t1, single gene model update, valid-1, status:[pasa:asmbl_7593,status:12], valid-1 NODE_4768_length_1262_cov_33.8585 . gene 155 1150 . - . ID=g7544;Name=g7544.t1 NODE_4768_length_1262_cov_33.8585 . mRNA 155 1150 . - . ID=g7544.t1;Parent=g7544;Name=g7544.t1 NODE_4768_length_1262_cov_33.8585 . exon 1013 1150 . - . ID=g7544.t1.exon1;Parent=g7544.t1 NODE_4768_length_1262_cov_33.8585 . CDS 1013 1150 . - 0 ID=cds.g7544.t1;Parent=g7544.t1 NODE_4768_length_1262_cov_33.8585 . exon 561 647 . - . ID=g7544.t1.exon2;Parent=g7544.t1 NODE_4768_length_1262_cov_33.8585 . CDS 561 647 . - 0 ID=cds.g7544.t1;Parent=g7544.t1 NODE_4768_length_1262_cov_33.8585 . exon 155 321 . - . ID=g7544.t1.exon3;Parent=g7544.t1 NODE_4768_length_1262_cov_33.8585 . CDS 155 321 . - 0 ID=cds.g7544.t1;Parent=g7544.t1;3_prime_partial=true #PROT g7544.t1 g7544 MCFFCVHVCVRASTVCLQEEYQSEGIKWNPIKFFNNKVVCDLIESKKPPGIMCVLDDVCATMHAVSDGADSKFLEKLNAAVSGNEHFNAIQGAFIIQHYAGKVTYDMGGFCERNKDVLFKDLIIVMQSSQ # PASA_UPDATE: g7127.t1, single gene model update, valid-1, status:[pasa:asmbl_3893,status:12], valid-1 NODE_2262_length_7008_cov_43.9 . gene 83 3350 . + . ID=g7127;Name=g7127.t1 NODE_2262_length_7008_cov_43.9 . mRNA 83 3350 . + . ID=g7127.t1;Parent=g7127;Name=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 83 180 . + . ID=g7127.t1.exon1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 83 180 . + 0 ID=cds.g7127.t1;Parent=g7127.t1;5_prime_partial=true NODE_2262_length_7008_cov_43.9 . exon 488 575 . + . ID=g7127.t1.exon2;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 488 575 . + 1 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 1158 1169 . + . ID=g7127.t1.exon3;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 1158 1169 . + 0 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 1367 1428 . + . ID=g7127.t1.exon4;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 1367 1428 . + 0 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 1747 1859 . + . ID=g7127.t1.exon5;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 1747 1859 . + 1 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 2089 2187 . + . ID=g7127.t1.exon6;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 2089 2187 . + 2 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 2501 2592 . + . ID=g7127.t1.exon7;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 2501 2592 . + 2 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . exon 2863 3350 . + . ID=g7127.t1.exon8;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . CDS 2863 2970 . + 0 ID=cds.g7127.t1;Parent=g7127.t1 NODE_2262_length_7008_cov_43.9 . three_prime_UTR 2971 3350 . + . ID=g7127.t1.utr3p1;Parent=g7127.t1 #PROT g7127.t1 g7127 LLYRMLPRAVAEQLKLGKSVAAESFDSVTIFFSDIVGFTTIASESTPLQVVDLLNDLYTCFDDVYKVETIGDAYMVASGLPMRNGNRHAGEIATMALHLLSATVNFKIRHLPLRNLQLRAGVHTGPVVAGVVGLKMPRYCLFGDTVNTASRMESGGLALRVHMSSVTADVLLQLGGYHVECRGQLEVKGKGTMTTYWLTGRDGFDKKLPSLDNAATLSAHSFK* # PASA_UPDATE: g7128.t1, single gene model update, valid-1, status:[pasa:asmbl_3894,status:12], valid-1 NODE_2262_length_7008_cov_43.9 . gene 3930 6453 . + . ID=g7128;Name=g7128.t1 NODE_2262_length_7008_cov_43.9 . mRNA 3930 6453 . + . ID=g7128.t1;Parent=g7128;Name=g7128.t1 NODE_2262_length_7008_cov_43.9 . five_prime_UTR 3930 4012 . + . ID=g7128.t1.utr5p1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . five_prime_UTR 4160 4175 . + . ID=g7128.t1.utr5p2;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 3930 4012 . + . ID=g7128.t1.exon1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 4160 4241 . + . ID=g7128.t1.exon2;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . CDS 4176 4241 . + 0 ID=cds.g7128.t1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 4555 4588 . + . ID=g7128.t1.exon3;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . CDS 4555 4588 . + 0 ID=cds.g7128.t1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 4780 5073 . + . ID=g7128.t1.exon4;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . CDS 4780 5073 . + 2 ID=cds.g7128.t1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 5342 5786 . + . ID=g7128.t1.exon5;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . CDS 5342 5786 . + 2 ID=cds.g7128.t1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . exon 6155 6453 . + . ID=g7128.t1.exon6;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . CDS 6155 6269 . + 1 ID=cds.g7128.t1;Parent=g7128.t1 NODE_2262_length_7008_cov_43.9 . three_prime_UTR 6270 6453 . + . ID=g7128.t1.utr3p1;Parent=g7128.t1 #PROT g7128.t1 g7128 MLPQLARGALLRPRMLSTQTLMRCMRPFSSQAKATAPPAQPAAPTVFVDGGVARLKLALGKESHLFTLSASSSVGRFAKSVQEEGNAKNVVVRSSDGTRIAQSTAIADLLRSGDFTLTVDDKSIAVKTSSEAKQLATQASDVGNIRSTVAALHASLQSDREESVEVLEGQLRTLQAEFEPLKTIRDDIDDSAHGRADRAMLFGIGLMGVQFGVLARLTWWEYSWDIIEPVTYFVTYGSAIMAAGYYFVTKRDFEYSAEKERRAELAFAKIARSKNLDVNRYNSLIDAIHQVEADIAGVRRREEIVRAVAKEAKKADL* # PASA_UPDATE: g7068.t1, single gene model update, valid-1, status:[pasa:asmbl_4307,status:12], valid-1 NODE_2434_length_6292_cov_42.7682 . gene 3395 5811 . + . ID=g7068;Name=g7068.t1 NODE_2434_length_6292_cov_42.7682 . mRNA 3395 5811 . + . ID=g7068.t1;Parent=g7068;Name=g7068.t1 NODE_2434_length_6292_cov_42.7682 . exon 3395 4925 . + . ID=g7068.t1.exon1;Parent=g7068.t1 NODE_2434_length_6292_cov_42.7682 . CDS 3395 4925 . + 0 ID=cds.g7068.t1;Parent=g7068.t1 NODE_2434_length_6292_cov_42.7682 . exon 5220 5404 . + . ID=g7068.t1.exon2;Parent=g7068.t1 NODE_2434_length_6292_cov_42.7682 . CDS 5220 5404 . + 2 ID=cds.g7068.t1;Parent=g7068.t1 NODE_2434_length_6292_cov_42.7682 . exon 5608 5811 . + . ID=g7068.t1.exon3;Parent=g7068.t1 NODE_2434_length_6292_cov_42.7682 . CDS 5608 5811 . + 0 ID=cds.g7068.t1;Parent=g7068.t1;3_prime_partial=true #PROT g7068.t1 g7068 MAPRGKVLRFDARIFSAPSSEGRSSLPSSNQPLLAVPGSDRLQRRPSHVTQDTTDATYSSSATDTAGNDAENPTHDESQEDVDRKIAGLLSAMRLESNAKLNSAPIRIVVDGEDDNDLAHSPDFSAPLLTIAARLSRGSSTQSTISNYSNDSEHARLDSLAWGLGQADPETDPFTPSPSAPLRQRPSSVEVGLRDVSRSAYSGHGTHKNKTTGDSSDEDAVSGDNALTNLRKTLEGGRAWRRGGDDGDLTRSGSSLSMKSNSTATDDPGNGSGPFSRSDSRYSSRSGDGVESTSSENRLSIGSHYSTSSDRRGSTASSRSLPSDGFSVPTVLQRPYKAAAWRPLSTVCASDDSDEDNGGAYGSGKVRTSDVRVHPSSLNLSRNVSGGCLAPDEPIRDAARFSAGSALSLSSTRSSGDSMGLLASAHTLDGISLGGSFGSGSLSLDSARNGGTRSEDGSGGNSVARGTLVASGASGEHLNANAGRVEASVVIAGHRIARMLGKGSYSRVYEGVNVKTGLHVAMKVLSRQGSEGAAVFNNEYRINMAIGNHPNIIPIVSPCIFNSKKLSCLFFELCTGGDIFDKIFISKCVTPTLAVQYFVQLMRAVTHIHSIGICHLDIKPENMLLNAAGTLVLGDFGLGA # ORIGINAL: g13381.t1 original gene structure, not modified by PASA NODE_734_length_18389_cov_40.4603 AUGUSTUS gene 4807 6585 . - . ID=g13381;Name=g13381.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS mRNA 4807 6585 . - . ID=g13381.t1;Parent=g13381;Name=g13381.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 4807 6585 . - . ID=g13381.t1.exon1;Parent=g13381.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 4807 6585 . - 0 ID=cds.g13381.t1;Parent=g13381.t1 #PROT g13381.t1 g13381 MSARGGSGGGGGVTSSFPFSANGRRPYHIVVGILIVCACAYVLLGLRGRPSSHLHLTQSMEDGDVSADHEWMFDYTDFPFPDVVLDSAADNDGESLRDKTRKEGEGIVLSGRTVDAKGAGISIMRRKSRRVILVNYRPLSSGSHNSLGSDASQSKQLTISDDMNALNERPDGTNLFPKNNVFGVAERQMSRGGTPPSGGSEVDDALKKFGASKDNRVDVLDEMSGQSVYDTSGFRYEFVAVRHGLRLILPYYGLGWGGPAWLRENAKNSHMERLRLRAVENVLTALIKDAEAVHAGVPISVDDVGVVIDVGSTTGTYGMYAATYGLRSYMIEPNPLCVSDINKAIDANALGARASVLQAVASEVDAESLESGYAIDVGIVCRGERLTSPFTARLETHSQWTEQRLAAAETVKRRLRLLEGGDTLLLAENEKLMTMVGRVRSGDRAPLHSQPTPFALSDMRVTIPVSSVRIDTLIAEKEIKRVALVVVDVGGMEPAVLLPLLEPARNGIIRNIVVRLVPSAWPSFGFTDRTAVAAFVAELCRAGGYYVTRVAGARVIESDVAATLAAEIREMQFGDMDVVMTSDAPHPSAGKC* # ORIGINAL: g13384.t1 original gene structure, not modified by PASA NODE_734_length_18389_cov_40.4603 AUGUSTUS gene 17549 18307 . + . ID=g13384;Name=g13384.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS mRNA 17549 18307 . + . ID=g13384.t1;Parent=g13384;Name=g13384.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 17549 18307 . + . ID=g13384.t1.exon1;Parent=g13384.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 17549 18307 . + 0 ID=cds.g13384.t1;Parent=g13384.t1 #PROT g13384.t1 g13384 MHHHGEQDAECQDIEDKLEKCLFVTTVTDCLPDSGFINYLKLPYCSLPHHYGFALMVLFLWMIFLFIALGTTAEEFFCPALSVISTTLNLSQNVAGVTFLALGNGAPDIFSVIASITASKDGAALAVGELAGSGLFVSTVVVGSVAIAVPFTVTRRPFLRDASFYLVAVGLTFGILADGKIHSWEAAVFVVLYVIYVGVVVIGRRVYQQRKADSERRRLLQKQNEEDVGEVSVAREFGACLKVFSVLCCCLL* # PASA_UPDATE: g13380.t1, single gene model update, valid-1, status:[pasa:asmbl_9112,status:3], valid-1 NODE_734_length_18389_cov_40.4603 . gene 2565 4226 . + . ID=g13380;Name=g13380.t1 NODE_734_length_18389_cov_40.4603 . mRNA 2565 4226 . + . ID=g13380.t1;Parent=g13380;Name=g13380.t1 NODE_734_length_18389_cov_40.4603 . five_prime_UTR 2565 2756 . + . ID=g13380.t1.utr5p1;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . exon 2565 2828 . + . ID=g13380.t1.exon1;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . CDS 2757 2828 . + 0 ID=cds.g13380.t1;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . exon 3098 3496 . + . ID=g13380.t1.exon2;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . CDS 3098 3496 . + 0 ID=cds.g13380.t1;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . exon 3766 4226 . + . ID=g13380.t1.exon3;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . CDS 3766 3918 . + 0 ID=cds.g13380.t1;Parent=g13380.t1 NODE_734_length_18389_cov_40.4603 . three_prime_UTR 3919 4226 . + . ID=g13380.t1.utr3p1;Parent=g13380.t1 #PROT g13380.t1 g13380 MSASLLLRTAPVRAVRAIGASCVQSRVALRTYRRGLHPRLYKTIFVNTDGSTFSAYVASDKGVIRLVDDQRNTEPWTEGADATLQEDEFLLAYEAKYGQQKVATDTNATVKAKTLLMARLKSKAKPDAAPKVEQTSAQKKVLQSITLATEGIKAEDKARQKQLAEERAAEEAKLAKPAPAVVDDKAKGKGAPATGKGAPSAKAAAKK* # PASA_UPDATE: g13379.t1, single gene model update, valid-1, status:[pasa:asmbl_9114,status:12],[pasa:asmbl_9115,status:12], valid-1 NODE_734_length_18389_cov_40.4603 . gene 130 2119 . - . ID=g13379;Name=g13379.t1 NODE_734_length_18389_cov_40.4603 . mRNA 130 2119 . - . ID=g13379.t1;Parent=g13379;Name=g13379.t1 NODE_734_length_18389_cov_40.4603 . five_prime_UTR 1967 2119 . - . ID=g13379.t1.utr5p1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . exon 1703 2119 . - . ID=g13379.t1.exon1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . CDS 1703 1966 . - 0 ID=cds.g13379.t1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . exon 1342 1485 . - . ID=g13379.t1.exon2;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . CDS 1342 1485 . - 0 ID=cds.g13379.t1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . exon 957 1085 . - . ID=g13379.t1.exon3;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . CDS 957 1085 . - 0 ID=cds.g13379.t1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . exon 550 637 . - . ID=g13379.t1.exon4;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . CDS 550 637 . - 0 ID=cds.g13379.t1;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . exon 130 331 . - . ID=g13379.t1.exon5;Parent=g13379.t1 NODE_734_length_18389_cov_40.4603 . CDS 130 331 . - 2 ID=cds.g13379.t1;Parent=g13379.t1;3_prime_partial=true #PROT g13379.t1 g13379 MSAMHPTLLASKARAQARMQQTASNFPMRQQQQQPKPAPAPLEEPVDYAAAGASVITVTEEQYASYTAKASRARPTGLILRDLINYMKANMQFMRFDEILTETGNSVITADQYRELLESLKQNPKVYYENDQFKFKPTINVSGKDDIVSLLRGMYEEGVGGMLQSTLLESYPEVGNDIDTIILPVLSQRIAEGISHPFYHRMSAFINEADDMVSKLRVQADTLELEYSRLLCFFGLPEVERKKKATEDFFASVFDFIGGYEVATKAAEKPVVAEK # ORIGINAL: g13383.t1 original gene structure, not modified by PASA NODE_734_length_18389_cov_40.4603 AUGUSTUS gene 12590 16148 . + . ID=g13383;Name=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS mRNA 12590 16148 . + . ID=g13383.t1;Parent=g13383;Name=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 12590 13090 . + . ID=g13383.t1.exon1;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 12590 13090 . + 0 ID=cds.g13383.t1;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 13308 13653 . + . ID=g13383.t1.exon2;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 13308 13653 . + 0 ID=cds.g13383.t1;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 13981 14110 . + . ID=g13383.t1.exon3;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 13981 14110 . + 2 ID=cds.g13383.t1;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 14359 14477 . + . ID=g13383.t1.exon4;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 14359 14477 . + 1 ID=cds.g13383.t1;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 14797 16148 . + . ID=g13383.t1.exon5;Parent=g13383.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 14797 16148 . + 2 ID=cds.g13383.t1;Parent=g13383.t1 #PROT g13383.t1 g13383 MLLQADFARAAPHLSSHIGGYHLSEEHHLRKSLCEPIRPKSYTRRSLIVSGGRSSLPCSSLALSTSTSTLSQRIIDCRSVVAAGPEQSPRMSAGLVNMPPIDTLSKQVYAQQQQQQNHHHHHGDGHGHHHSSNAVARFMGDYKIIKTLGEGTFAKVKLAVHVVSQMKVAIKIIDKRAIHDKYVLENLHREASIMKRTNHPNVIRFYEEIETDNEYCLVMEHAGGGEILDYIVAHGRLSEKETRRFIRQVVSAVEHLHQIGIVHRDLKAENLLLDDNMNIKIIDFGLSNNFEIGEMLRTRCGSFEYTAPELIASKAYVGPGIDVWTIGVNLYAMLTGCLPFVSDNVATIYSLQVAEKYDVPQDLSPGCKNFLKVLLTVDPNKRPTIDEVRQHPWLNKDCEPLQKWTGLAYTGECDINEDIVSRLVSAGFDRDRLIRAARDNMCNREAAAYRLYKLSPLLRVASTSSRAAAPHPRKAHSVSTADPSTSQQRPHSIASSNGIPGRPVAASGNASIAVSHGAHQQQQQQYGRGRELIIGGEVASGGLASLIDEDDDENNEIASGLPATRLPSNDQMLPRSADPPRRRTDAGNGQVATVGIASNNYNNSSASSLTSSLISETIEDFGSTTVLRPPSGSKRGNNSVTTSGGNNNSYGDAINLPHINDALPVSQTSSPSTMRKQESAERRKSAGGLFSFFRRTKRQSIATELPEPDRRAAAPSPTPSTSSADGGARFAFSITSSKRPDKILREIKKVLVSNSVQFVDGERDSVICDQNELRFEIQVCKIAGLELNGVRFRRIAGDIWHYTTLSRVLVANIKI* # ORIGINAL: g13382.t1 original gene structure, not modified by PASA NODE_734_length_18389_cov_40.4603 AUGUSTUS gene 8568 9983 . - . ID=g13382;Name=g13382.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS mRNA 8568 9983 . - . ID=g13382.t1;Parent=g13382;Name=g13382.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS exon 8568 9983 . - . ID=g13382.t1.exon1;Parent=g13382.t1 NODE_734_length_18389_cov_40.4603 AUGUSTUS CDS 8568 9983 . - 0 ID=cds.g13382.t1;Parent=g13382.t1 #PROT g13382.t1 g13382 MSKPFRRRQLAMMLVVFASVLCFVIKIHSDWNVGEPASPTKRDVRRRANERHGWSRDNGVIYTEFEEDNLEVVDEDADALQELIAEELAAEIKGSRKRTNGAATPPEFLVDSPSGFKFDEITVRLGHRLLLPSNGFALTGTAFMRYWAQRTFSDRARLKNAEDILSSFSPLHLLTKSPSVSDVVIDVGSNSGTFGLHAAIYGFRTWMVEPHPLCAHELQKAVVANKVSGNAFVVQAAVADEDVDASAGTYAIEVGLVCRSEMFLTPFRATRNGLTADETADVVKRRISMVDNGDLGLSRARAGLPVPLSATGTTVGVKSQRNAVSLQEPVDTAAIALTDTRIAYPVKSIRLDTLLRVNNISSVMLLVLDLDGYEPVALSSALASIRAGMIQNIIVRFSTSEWNKFGYAKREEVARFIGDVCVAGRYFAVRLPASFFSDPVGDVIAKELGEGRIVSQDFWFSRSQIDGASRC* # ORIGINAL: g2957.t1 original gene structure, not modified by PASA NODE_7200_length_460_cov_38.639_potentialcontaminant AUGUSTUS gene 238 378 . - . ID=g2957;Name=g2957.t1 NODE_7200_length_460_cov_38.639_potentialcontaminant AUGUSTUS mRNA 238 378 . - . ID=g2957.t1;Parent=g2957;Name=g2957.t1 NODE_7200_length_460_cov_38.639_potentialcontaminant AUGUSTUS exon 238 378 . - . ID=g2957.t1.exon1;Parent=g2957.t1 NODE_7200_length_460_cov_38.639_potentialcontaminant AUGUSTUS CDS 238 378 . - 0 ID=cds.g2957.t1;Parent=g2957.t1 #PROT g2957.t1 g2957 GGKILVGGKTIDGPGNFVQPTIALVKHDMPIVQHETFVPVLHVMKFK # ORIGINAL: g1875.t1 original gene structure, not modified by PASA NODE_653_length_19531_cov_41.8221 AUGUSTUS gene 4851 12928 . + . ID=g1875;Name=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS mRNA 4851 12928 . + . ID=g1875.t1;Parent=g1875;Name=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 4851 4997 . + . ID=g1875.t1.exon1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 4851 4997 . + 0 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 5337 5367 . + . ID=g1875.t1.exon2;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 5337 5367 . + 0 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 5948 6198 . + . ID=g1875.t1.exon3;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 5948 6198 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 6429 6786 . + . ID=g1875.t1.exon4;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 6429 6786 . + 0 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 7096 7308 . + . ID=g1875.t1.exon5;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 7096 7308 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 7630 8403 . + . ID=g1875.t1.exon6;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 7630 8403 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 8942 9117 . + . ID=g1875.t1.exon7;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 8942 9117 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 9513 10129 . + . ID=g1875.t1.exon8;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 9513 10129 . + 0 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 11010 11088 . + . ID=g1875.t1.exon9;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 11010 11088 . + 1 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 11377 11456 . + . ID=g1875.t1.exon10;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 11377 11456 . + 0 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 11668 11718 . + . ID=g1875.t1.exon11;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 11668 11718 . + 1 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 11871 12058 . + . ID=g1875.t1.exon12;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 11871 12058 . + 1 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 12350 12472 . + . ID=g1875.t1.exon13;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 12350 12472 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 12711 12928 . + . ID=g1875.t1.exon14;Parent=g1875.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 12711 12928 . + 2 ID=cds.g1875.t1;Parent=g1875.t1 #PROT g1875.t1 g1875 MRLSLLVIVFAAALTTPLFTGCDSASRKIKFGVLLSTSTGNKERIDHLRLCVEHVNNKTDGYWDDLLPGITLDYIANTTGSCVTRIALNSAAWQILTTDVFAVIGTTCSVDSEVVSQLLSLDTFRRPQISYSATSPKLSDKTMFPTFMRTIVSDDFQGRALAQLCVYHGYRRVGILKSDSAYGQGIALVFVPEFERLGGHIVTEETFSEISAGDVTQQLRTMKRANVRVILLFAQETDAYNIISQAVSMGLTGPNYQWIASDAAVSDQSYQKLVNGTMVDDERVRQAMYGMLGVQPATGYGPKFAPYAQLWRGLPSTYFDADDDRSTMDAYAPATYDACVTLAMGVNATLARGILETDADELLASLKSVSFVGVSGDISFDAHGDRVSGLYSIFNVNRTVGAPIGSWDAHAGISYSRSPVFSNGLLVPPIDGSCPDDCLGEGVCDVNTGRCSCNTGHNAANCSAVTPEVLPEQTTGNVIPCGHIAHYKVEATIPSSLLTLRLKSGRDVRTGDFDCVLYLRRASSLLSVGNSSSPEFAPHLDPINPDMQLFEVSVVTADDLGVYYVDVYGTGRSCPASYRLEYVVTPPPSSSGTSIVGLIVGLMVGAFVVCAALVLASFIVYRRRQSGLLQRVQRSLIKSTEIELLNELAEGAYGVVYRARFRGTIVAVKMMKGRNHDAVKSRASGLNGVGGGGQQLRETQNRSIDVRVALRIAQMSLASKSNNNNNNNNSGGSSSNNALGRGGSLSAGRKKSSSHKSNVSLGADKRSIATTNRWYEDSRGFAQLRKQSNKTDGTPGMPMSTACVGLDPDHAVDGPGVPGNTVNWVGASIGQGQEGSNQQSAKESLRMFLDEVDIMCTLRHPHIVLYMGACLDDLDRPMIIQEFLPGGSLRDGLSSTRPWSLKQRLQMAIDACAGMEYLHLNTPQILHRDLKSPNVLLTASLEAKVTDFGLSTVRHGDVRDSNDDSELVGTIAYIAPECFLGEPCSTASDVYAMGIVLWECLTRDDPYEVELQRGGFNSVDDMLSAVINRDLRPSIPDDASPILGRIIRDCWSHHPSVRPSFSTLREALGEFVSTFESGDKDSDAVPVIALPMTHALSIHSL* # PASA_UPDATE: g1877.t1, single gene model update, valid-1, status:[pasa:asmbl_8709,status:3], valid-1 NODE_653_length_19531_cov_41.8221 . gene 17437 18607 . - . ID=g1877;Name=g1877.t1 NODE_653_length_19531_cov_41.8221 . mRNA 17437 18607 . - . ID=g1877.t1;Parent=g1877;Name=g1877.t1 NODE_653_length_19531_cov_41.8221 . five_prime_UTR 18395 18607 . - . ID=g1877.t1.utr5p1;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . exon 18159 18607 . - . ID=g1877.t1.exon1;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . CDS 18159 18394 . - 0 ID=cds.g1877.t1;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . exon 17835 17942 . - . ID=g1877.t1.exon2;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . CDS 17835 17942 . - 1 ID=cds.g1877.t1;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . exon 17437 17612 . - . ID=g1877.t1.exon3;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . CDS 17504 17612 . - 1 ID=cds.g1877.t1;Parent=g1877.t1 NODE_653_length_19531_cov_41.8221 . three_prime_UTR 17437 17503 . - . ID=g1877.t1.utr3p1;Parent=g1877.t1 #PROT g1877.t1 g1877 MAEGDKGFCYYLCCCFTCWCCSKRFCAGLVLFIVFGNLLGISFMPNINIQYGDGTSWTNNAGGDSSDGSGNFGREDRRRYSNPFPRKSDYDVLGLRRGASATEIKDAYKQLALKYHPDKNPGCAECPDKFMTLTDAYNRLKPDRRYNRRQ* # PASA_UPDATE: g1876.t1, single gene model update, valid-1, status:[pasa:asmbl_8710,status:3], valid-1 NODE_653_length_19531_cov_41.8221 . gene 13095 17082 . + . ID=g1876;Name=g1876.t1 NODE_653_length_19531_cov_41.8221 . mRNA 13095 17082 . + . ID=g1876.t1;Parent=g1876;Name=g1876.t1 NODE_653_length_19531_cov_41.8221 . five_prime_UTR 13095 13397 . + . ID=g1876.t1.utr5p1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 13095 13600 . + . ID=g1876.t1.exon1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 13398 13600 . + 0 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 13792 14021 . + . ID=g1876.t1.exon2;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 13792 14021 . + 1 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 14291 14439 . + . ID=g1876.t1.exon3;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 14291 14439 . + 2 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 14745 14909 . + . ID=g1876.t1.exon4;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 14745 14909 . + 0 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 15162 15335 . + . ID=g1876.t1.exon5;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 15162 15335 . + 0 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 15524 15611 . + . ID=g1876.t1.exon6;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 15524 15611 . + 0 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 15804 15955 . + . ID=g1876.t1.exon7;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 15804 15955 . + 2 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 16162 16679 . + . ID=g1876.t1.exon8;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 16162 16679 . + 0 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . exon 16884 17082 . + . ID=g1876.t1.exon9;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . CDS 16884 16980 . + 1 ID=cds.g1876.t1;Parent=g1876.t1 NODE_653_length_19531_cov_41.8221 . three_prime_UTR 16981 17082 . + . ID=g1876.t1.utr3p1;Parent=g1876.t1 #PROT g1876.t1 g1876 MATSVILRVVIPAHNVQKLLMFDTSLPVWFAKQLVLDKMAKDIDNAINHGLYLPPANGKAGKFLDEERPLSSYNLEKDAVVEFVLKRKELVRSGSVVQRQKSRDTESKAVRRKLLERIEKKASDKIAKMLQQGVDPNFQDEDNGELPLSYAVAYGAIDVIKALVAGGAYMDFRSKEGFTALHRAAQRGASDSLATLLDLGASPNYRDKSGLTPLYYAAIHGQHKCSELLLKDYSLVNVTDSSGWTELHHAAKHGHSYVVEQLIYYGCETDAQNATGNTPLHVTAVANQVSCARMLMKRGCNPNVTNKAGQTAVQVAIVSGNMELAQTIKAFKAEEVVRYKGEPPYNQRKTRVDPAALKTGGSGTRARLSFSGQKPASLASAGKPTAEVFQGPAPPVGWAVAIYPYMANFADELNLEENDVICITSKGDDGWWEGLLASGMQGVFPANYCEPTAPPPNASAFRIPGGGAGVGSAAVLVHLHQQHASPQPALSYSPATATPAYFPPAPVAVAYAPPVDFEDLPPPPPEMESFYPPETSLNSSFSASSGSYGMSGLSLSQSGSSLSRSSSTSGPPKPAKPPMFAGPPKPPLPPQ* # ORIGINAL: g1874.t1 original gene structure, not modified by PASA NODE_653_length_19531_cov_41.8221 AUGUSTUS gene 205 3472 . + . ID=g1874;Name=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS mRNA 205 3472 . + . ID=g1874.t1;Parent=g1874;Name=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 205 556 . + . ID=g1874.t1.exon1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 205 556 . + 0 ID=cds.g1874.t1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 935 1048 . + . ID=g1874.t1.exon2;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 935 1048 . + 2 ID=cds.g1874.t1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 1219 2147 . + . ID=g1874.t1.exon3;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 1219 2147 . + 2 ID=cds.g1874.t1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 2325 2423 . + . ID=g1874.t1.exon4;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 2325 2423 . + 0 ID=cds.g1874.t1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 2706 2828 . + . ID=g1874.t1.exon5;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 2706 2828 . + 0 ID=cds.g1874.t1;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS exon 3161 3472 . + . ID=g1874.t1.exon6;Parent=g1874.t1 NODE_653_length_19531_cov_41.8221 AUGUSTUS CDS 3161 3472 . + 0 ID=cds.g1874.t1;Parent=g1874.t1 #PROT g1874.t1 g1874 MKIIQKINDRAERGDKFYSLEFFPPRTANGAYNLVSRFDRLASCEPLFIDVTWGAGGGEPGADHETSSMSIASVALNYCGLETMLHLTCVGQTREEILRHLNRAKEVGIRNILALRGDAAPGKEWQAGEGGFMYATDLVRFIREQFGDYFGICVAGYPNGHPDATSLDDDIMHLKEKVDAGSDFIITQLFFEVDTFLEFVRKCRAIGITCPILPGVLPIQGYQSLRHLVKLSQLAPPQSIVDAIETMKDDDESIRAYGVRLAVQMCQELLASDEVPGIHFYTLNREVAVREVIVELGLYCSEKVTRSLPWRPSANDKRSGEDVRPIFWATRPKSYLARTQEWDDFPNGRWGDSSSPAFGELSDYYLFHAPKDGRPELRRMWGEHLTSEADVFDVFSKYITHTGGVKSTPWNEDSLSLETLPMAEKLGDLNKFGILTINSQPAVNGRPSDDSAVGWGGKGGYVYQKAYLEFFTSRENYQLLLKVLDEFPQIHYHAMNKSGSEDSTNSPTSKPNAVTWGVFPGREIVQPTVVDPVSFKTWKDEAFALWNMWGELYEPHSASRKVIDEIRDSYLLVNVVDNDFVGGCIFDVFDRMLELKGVQSRVQSRGSVGRVSTELSADADSNNSSSRGGASSGVQIVTSAGH* # PASA_UPDATE: g7580.t1, single gene model update, valid-1, status:[pasa:asmbl_6906,status:3], valid-1 # PASA_UPDATE: g7580.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6907,status:12], valid-1 NODE_4052_length_2280_cov_35.5574 . gene 133 1718 . + . ID=g7580;Name=g7580.t1 NODE_4052_length_2280_cov_35.5574 . mRNA 133 1718 . + . ID=g7580.t1;Parent=g7580;Name=g7580.t1 NODE_4052_length_2280_cov_35.5574 . five_prime_UTR 133 264 . + . ID=g7580.t1.utr5p1;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . exon 133 906 . + . ID=g7580.t1.exon1;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . CDS 265 906 . + 0 ID=cds.g7580.t1;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . exon 1124 1239 . + . ID=g7580.t1.exon2;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . CDS 1124 1228 . + 0 ID=cds.g7580.t1;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . exon 1469 1718 . + . ID=g7580.t1.exon3;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . three_prime_UTR 1229 1239 . + . ID=g7580.t1.utr3p1;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . three_prime_UTR 1469 1718 . + . ID=g7580.t1.utr3p2;Parent=g7580.t1 NODE_4052_length_2280_cov_35.5574 . mRNA 133 1276 . + . ID=g7580.t1.1.5b6be70b;Parent=g7580;Name=g7580.t1 NODE_4052_length_2280_cov_35.5574 . five_prime_UTR 133 264 . + . ID=g7580.t1.1.5b6be70b.utr5p1;Parent=g7580.t1.1.5b6be70b NODE_4052_length_2280_cov_35.5574 . exon 133 906 . + . ID=g7580.t1.1.5b6be70b.exon1;Parent=g7580.t1.1.5b6be70b NODE_4052_length_2280_cov_35.5574 . CDS 265 906 . + 0 ID=cds.g7580.t1.1.5b6be70b;Parent=g7580.t1.1.5b6be70b NODE_4052_length_2280_cov_35.5574 . exon 1124 1276 . + . ID=g7580.t1.1.5b6be70b.exon2;Parent=g7580.t1.1.5b6be70b NODE_4052_length_2280_cov_35.5574 . CDS 1124 1228 . + 0 ID=cds.g7580.t1.1.5b6be70b;Parent=g7580.t1.1.5b6be70b NODE_4052_length_2280_cov_35.5574 . three_prime_UTR 1229 1276 . + . ID=g7580.t1.1.5b6be70b.utr3p1;Parent=g7580.t1.1.5b6be70b #PROT g7580.t1 g7580 MATSRRPSQAEDPTLLTEEELRAERLEADANRRASNVRASFNPLSREASLDDPGASSTGVEQSVSALDAHKASVHHDAPTDLQRIPLTTVCTYGELEPIAESTVQPISTGNLHVPLQQHAQSHLPPSPSLTSRMYAIVLKEEVVENKESIARDSFAYQSSTISWLGSSISLLLGSALLGYNQERTFALTLASVGGCMVVVSLGLYYYHMWELARNKPILSRVTVGTLLSSVTISIIAITTASYFNAPT* #PROT g7580.t1.1.5b6be70b g7580 MATSRRPSQAEDPTLLTEEELRAERLEADANRRASNVRASFNPLSREASLDDPGASSTGVEQSVSALDAHKASVHHDAPTDLQRIPLTTVCTYGELEPIAESTVQPISTGNLHVPLQQHAQSHLPPSPSLTSRMYAIVLKEEVVENKESIARDSFAYQSSTISWLGSSISLLLGSALLGYNQERTFALTLASVGGCMVVVSLGLYYYHMWELARNKPILSRVTVGTLLSSVTISIIAITTASYFNAPT* # PASA_UPDATE: g4305.t1, single gene model update, valid-1, status:[pasa:asmbl_320,status:3], valid-1 NODE_1083_length_14094_cov_41.6602 . gene 96 3756 . - . ID=g4305;Name=g4305.t1 NODE_1083_length_14094_cov_41.6602 . mRNA 96 3756 . - . ID=g4305.t1;Parent=g4305;Name=g4305.t1 NODE_1083_length_14094_cov_41.6602 . five_prime_UTR 3557 3756 . - . ID=g4305.t1.utr5p1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 3464 3756 . - . ID=g4305.t1.exon1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 3464 3556 . - 0 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 3113 3235 . - . ID=g4305.t1.exon2;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 3113 3235 . - 0 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 2802 2846 . - . ID=g4305.t1.exon3;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 2802 2846 . - 0 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 2522 2637 . - . ID=g4305.t1.exon4;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 2522 2637 . - 0 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 2026 2162 . - . ID=g4305.t1.exon5;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 2026 2162 . - 1 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 1531 1661 . - . ID=g4305.t1.exon6;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 1531 1661 . - 2 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 1217 1337 . - . ID=g4305.t1.exon7;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 1217 1337 . - 0 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 767 856 . - . ID=g4305.t1.exon8;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 767 856 . - 2 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . exon 96 587 . - . ID=g4305.t1.exon9;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . CDS 460 587 . - 2 ID=cds.g4305.t1;Parent=g4305.t1 NODE_1083_length_14094_cov_41.6602 . three_prime_UTR 96 459 . - . ID=g4305.t1.utr3p1;Parent=g4305.t1 #PROT g4305.t1 g4305 MGTLRARLCVAAVLLCSAYAAVAMQFGDNIKLIDGIYDAENQLFTVPDSRLFVSAGDNVYEITTDGNGTYGKTPMFENATYCLGLSQVGNVVYVVRQLKGCIDAVLSDTNLLSAATLIPGEPLVFRDVFQFSDIAIPNGLTADPSGRYLFVSDSAYLRGTGKIIRVEISESDPFVVSNQVTWLDHSLAGTPNGLRFFNGSIYYTDTGALRRVAVNEDMSAGDQVELYKASTILDDLTVIASGDGTAVILFVDYLRGGIAGVDSWTGALVSASAHDLFVGPSSVMQGMPPLFQPDELVVTDKGLICDKDGNGNFFSALSFSLDSSRRL* # ORIGINAL: g4306.t1 original gene structure, not modified by PASA NODE_1083_length_14094_cov_41.6602 AUGUSTUS gene 4428 10733 . - . ID=g4306;Name=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS mRNA 4428 10733 . - . ID=g4306.t1;Parent=g4306;Name=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS exon 10164 10733 . - . ID=g4306.t1.exon1;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS CDS 10164 10733 . - 0 ID=cds.g4306.t1;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS exon 9376 9864 . - . ID=g4306.t1.exon2;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS CDS 9376 9864 . - 0 ID=cds.g4306.t1;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS exon 5342 9218 . - . ID=g4306.t1.exon3;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS CDS 5342 9218 . - 0 ID=cds.g4306.t1;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS exon 4817 5124 . - . ID=g4306.t1.exon4;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS CDS 4817 5124 . - 2 ID=cds.g4306.t1;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS exon 4428 4697 . - . ID=g4306.t1.exon5;Parent=g4306.t1 NODE_1083_length_14094_cov_41.6602 AUGUSTUS CDS 4428 4697 . - 0 ID=cds.g4306.t1;Parent=g4306.t1 #PROT g4306.t1 g4306 MDDKENAAQTVVAQQQQQRRPPATKTGAKAFFANILGSHDANKDNNNNSNSNSDAKRAMSFQVDVSHVPASEATVAEEAVLTLALFSKPPHISFGDVAMGTTGKAVLRIDNPNILQHEITLEKIPTDKGFSIVDVNAAGAITVPPKSAVVVTITWQPRAEGKCREQLTMKWDNRHRVQAVLVGDAVAAKKRKKASQSSSQQPSKRQCIAAPAVASSTSTAETSRAPSRAASVCPDDFPVSSVAKSTSSALSASLTNKPATARRSIVPGVAQSRLRLSKPHGSVKALSASGEFSAASSARKFHPTASSRGVVNPYAARNALYDERWVEKQEKGFTKWLNFVLLPPDASDKAATEGDLLGKNDTIAKAHAAALPPRVLSARRRLNRQRMNGCALYQSPSFEDIIRNIDGAVVSGAIAVSPLVSLSEDVLIRDEIVGLLLGYSVPWLRLALETVYGELIPLDAHEDEMTLANFVVARLLHSDEISASFPATCHRDGYSAAMNAFVLNRLLRIVIFLDKAKLARLVEGDPCLFRKDSQYKSSRDVLLSLNRKYLTREGDITRHLAHMGYTVSHVQGAFEEYDYATTSLASDLTDGARLVRLVETLTGDSSLSRKLKLPASTRQHSLANVGMALSAVESQGIVLSDVRGGGITADDIVDGHREKTLVLLWKLVLRYQVDITVDLARLRVEIDSIRAETAALVHGSSNPERRESLDGFYFQSERLSLLLRWCAALCEPAGVKVTNFSSSFADGRALCLVVNRYHPSLLSTDQIQMQTTQSKAFAAESSSSESDPEPLTEAGWAGAFSPPSADRMTKHQRALIENERANFRLLQSAVRQIGGIPPMIRVPESTSTSSIAASMPDERVVITYVSYLCARLLDIGEETRAAVRIQRWWRTMHRLLEVRDVARFQAINSAAVEIQRMWRGKVARMAVQIIVQARADARTAELVRAVVPLQHRIRATLAMKREVASFKATLRSIVVVQSCVRRMIARKAFVKELRAVTVIQAHVRGYLVRRALSVRTAASTKIQSCFRRYACRTRYLAMRVAATVLQSAFRRFVARKAFVSAKKAAVVIQSAFRAHVASKTYATLRSTAVAMQLRFRATIAMRKQMAAYKKTVASIIVLQSLVRGRIAHKAFVAQKAAAITIQSAFRAHVASKKYATLRSTAIAMQRRFRATVAMRKEMATYQKTVASIVVLQSLVRGRIAHKAFVAQKAAAITIQSAFRAHIARSAYALLRGAAISMQRRFRATAAMRKEMAAYKKTVSSIVVLQSLVRGRIAHKAFVAQKAAAITIQSAFRAYAARVQYAKLHCITISMQRRFRATVAMRTEMAAYKKTVASIVVLQSLVRGRIARKAFAADIKGITLLQAHIRGFLARKQYAAAKNAVHVMQKHVRAWLVGRTQRRHFQLTISAILRIQAVARGLVARREYAVVVASRHEAAATIQRAFRASVVGRERREARLKHIRSVTVVQACVRGWATRMRMAREQEAAVVLQAFARMCIARKRVAVMRLAALKEESAVVVQRWFRALRAKRMEAAREAASVVIQTAVRAWITRRHAAATALQAVARGFIARRKMRKLLSGISRVQALWRGYSQRRKEKCAKIRRMRQKIEAVNATAVESQTLGNRTRSALDVLLTSKQLAFVLKACANLDVVTGLSYACCERMVATQDAVPILVKLIRSCNRSEPHMQVLRHALNILAHLAECPSTSEAAFAKGEVVVLAVDMLQIYREKEDVFMPAARLASVLCRDMARAEVIRNIPNLVSRVASIAALVEKRTNVGASKGTEARMPLRPISRINNAAPVASASRTSASASKHAAAMTKTPMMRAVDGLLQQLATPASAL* # PASA_UPDATE: g953.t1, single gene model update, valid-1, status:[pasa:asmbl_673,status:3], valid-1 # PASA_UPDATE: g953.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_674,status:12], valid-1 NODE_1180_length_13351_cov_55.1817 . gene 9010 11911 . + . ID=g953;Name=g953.t1 NODE_1180_length_13351_cov_55.1817 . mRNA 9010 11911 . + . ID=g953.t1;Parent=g953;Name=g953.t1 NODE_1180_length_13351_cov_55.1817 . five_prime_UTR 9010 9055 . + . ID=g953.t1.utr5p1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 9010 9144 . + . ID=g953.t1.exon1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 9056 9144 . + 0 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 9285 9366 . + . ID=g953.t1.exon2;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 9285 9366 . + 1 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 9529 9873 . + . ID=g953.t1.exon3;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 9529 9873 . + 0 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 10073 10259 . + . ID=g953.t1.exon4;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 10073 10259 . + 0 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 10458 10591 . + . ID=g953.t1.exon5;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 10458 10591 . + 2 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 10738 10829 . + . ID=g953.t1.exon6;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 10738 10829 . + 0 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 11009 11160 . + . ID=g953.t1.exon7;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 11009 11160 . + 1 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . exon 11386 11911 . + . ID=g953.t1.exon8;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . CDS 11386 11573 . + 2 ID=cds.g953.t1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . three_prime_UTR 11574 11911 . + . ID=g953.t1.utr3p1;Parent=g953.t1 NODE_1180_length_13351_cov_55.1817 . mRNA 9214 11911 . + . ID=g953.t1.1.5b6be70a;Parent=g953;Name=g953.t1 NODE_1180_length_13351_cov_55.1817 . five_prime_UTR 9214 9366 . + . ID=g953.t1.1.5b6be70a.utr5p1;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . five_prime_UTR 9529 9645 . + . ID=g953.t1.1.5b6be70a.utr5p2;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 9214 9366 . + . ID=g953.t1.1.5b6be70a.exon1;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 9529 9873 . + . ID=g953.t1.1.5b6be70a.exon2;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 9646 9873 . + 0 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 10073 10259 . + . ID=g953.t1.1.5b6be70a.exon3;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 10073 10259 . + 0 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 10458 10591 . + . ID=g953.t1.1.5b6be70a.exon4;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 10458 10591 . + 2 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 10738 10829 . + . ID=g953.t1.1.5b6be70a.exon5;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 10738 10829 . + 0 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 11009 11160 . + . ID=g953.t1.1.5b6be70a.exon6;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 11009 11160 . + 1 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . exon 11386 11911 . + . ID=g953.t1.1.5b6be70a.exon7;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . CDS 11386 11573 . + 2 ID=cds.g953.t1.1.5b6be70a;Parent=g953.t1.1.5b6be70a NODE_1180_length_13351_cov_55.1817 . three_prime_UTR 11574 11911 . + . ID=g953.t1.1.5b6be70a.utr3p1;Parent=g953.t1.1.5b6be70a #PROT g953.t1 g953 MRSIIALAVVAALVAIAAAAPHTSQVSYQGHKVFRIIPANEAHARAIRGLSRFTSLGLDFWREPSFIGHPIDIRVPPQSLGAFEGYLADLNVEYSTMVNDVQELLDGALPATELKSGDDFYTAYHTLDEINAWLQQQVQAYPNIAKLVNVGTTHEGRTLTAIKITGKGTGPKPGFWFDGGIHAREWISTAVNVYAIGNLLSKYGNDANVTRLVDAVEFTILPVFNADGYVYTHSTDRMWRKTRSANAGSSCAGVDPNRNWDEHWGEAGASTDPCAEDYQGPSAFSEIEVKSVAAYIKAQGNIKGYINFHSYSQLWMSPWGYTADKPKDFTIQNELSAAATKAIKAVHGTSFTYGPISTTIYPASGSSADWTYAELGAKFSYGVELRDTGKNGFVLPPDQIVPSGEEMFPALLLTAEYVLNDA* #PROT g953.t1.1.5b6be70a g953 MVNDVQELLDGALPATELKSGDDFYTAYHTLDEINAWLQQQVQAYPNIAKLVNVGTTHEGRTLTAIKITGKGTGPKPGFWFDGGIHAREWISTAVNVYAIGNLLSKYGNDANVTRLVDAVEFTILPVFNADGYVYTHSTDRMWRKTRSANAGSSCAGVDPNRNWDEHWGEAGASTDPCAEDYQGPSAFSEIEVKSVAAYIKAQGNIKGYINFHSYSQLWMSPWGYTADKPKDFTIQNELSAAATKAIKAVHGTSFTYGPISTTIYPASGSSADWTYAELGAKFSYGVELRDTGKNGFVLPPDQIVPSGEEMFPALLLTAEYVLNDA* # ORIGINAL: g954.t1 original gene structure, not modified by PASA NODE_1180_length_13351_cov_55.1817 AUGUSTUS gene 12205 13129 . - . ID=g954;Name=g954.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS mRNA 12205 13129 . - . ID=g954.t1;Parent=g954;Name=g954.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 12989 13129 . - . ID=g954.t1.exon1;Parent=g954.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 12989 13129 . - 0 ID=cds.g954.t1;Parent=g954.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 12205 12594 . - . ID=g954.t1.exon2;Parent=g954.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 12205 12594 . - 0 ID=cds.g954.t1;Parent=g954.t1 #PROT g954.t1 g954 MNDCGGAGGADSGSDDGDFHMGGGDGDEWSERDKKVATPCLALVKASASQKLMSRIRTEIIPTIVPNSTIAIAYLDSVAAASKSLPQVADDFVLSLYPPQNVQAIEKHATALASEASAVLELARASSQMARGNTEGDALSSNADGDESSPTRNWIEFLGKVVEHNLEKIRMQAPAR* # ORIGINAL: g951.t1 original gene structure, not modified by PASA NODE_1180_length_13351_cov_55.1817 AUGUSTUS gene 92 2124 . + . ID=g951;Name=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS mRNA 92 2124 . + . ID=g951.t1;Parent=g951;Name=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 92 311 . + . ID=g951.t1.exon1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 92 311 . + 0 ID=cds.g951.t1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 581 637 . + . ID=g951.t1.exon2;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 581 637 . + 2 ID=cds.g951.t1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 861 962 . + . ID=g951.t1.exon3;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 861 962 . + 2 ID=cds.g951.t1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 1166 1281 . + . ID=g951.t1.exon4;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 1166 1281 . + 2 ID=cds.g951.t1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 1505 1598 . + . ID=g951.t1.exon5;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 1505 1598 . + 0 ID=cds.g951.t1;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS exon 1964 2124 . + . ID=g951.t1.exon6;Parent=g951.t1 NODE_1180_length_13351_cov_55.1817 AUGUSTUS CDS 1964 2124 . + 2 ID=cds.g951.t1;Parent=g951.t1 #PROT g951.t1 g951 VEALGEDAILVVEEVTDEPSSMGASTNAGERAERADAPRDVPSRHEDSVGVEIPKTPVMRRLEDEGRSGSLARVNVRPSKGPIADVGREDRRTTGSAKSGSRRNSAGLHEVRDSQMLNMPKRAIPDTPAAKSMGNNYIPIYRRRGSNLCVFEGIDGFDPKMFSAEDLGASEADAAEQVHIASEDDSDVDYEDCENSDAVVRKWRAKVDRFFERIITPCTPASTSASVPAINVQSQARVASDSKTLSRVA* # PASA_UPDATE: g952.t1, single gene model update, valid-1, status:[pasa:asmbl_672,status:12],[pasa:asmbl_675,status:12], valid-1 NODE_1180_length_13351_cov_55.1817 . gene 3281 7399 . + . ID=g952;Name=g952.t1 NODE_1180_length_13351_cov_55.1817 . mRNA 3281 7399 . + . ID=g952.t1;Parent=g952;Name=g952.t1 NODE_1180_length_13351_cov_55.1817 . five_prime_UTR 3281 3438 . + . ID=g952.t1.utr5p1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . exon 3281 4629 . + . ID=g952.t1.exon1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . CDS 3439 4629 . + 0 ID=cds.g952.t1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . exon 4902 4958 . + . ID=g952.t1.exon2;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . CDS 4902 4958 . + 0 ID=cds.g952.t1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . exon 5124 5267 . + . ID=g952.t1.exon3;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . CDS 5124 5267 . + 0 ID=cds.g952.t1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . exon 5436 6230 . + . ID=g952.t1.exon4;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . CDS 5436 6230 . + 0 ID=cds.g952.t1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . exon 6551 7399 . + . ID=g952.t1.exon5;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . CDS 6551 7282 . + 0 ID=cds.g952.t1;Parent=g952.t1 NODE_1180_length_13351_cov_55.1817 . three_prime_UTR 7283 7399 . + . ID=g952.t1.utr3p1;Parent=g952.t1 #PROT g952.t1 g952 MPSSVVTLSGHSDNVYSVAYSPDGCTVASGSWDKTVRLWDVQTGALIRTLSGHSESVYSVAYLPDGCTIASGSDDKTVRLWDAQTGALIRTLSGHSDYVRSVAYSPDGCTIASGSDDKTVRLWDVQTGGLIRTISGHSDYVLSVAYSPDGHTVASGSIDKRARLWDAQTGALLRTLSGHSDYVRSVAYSPDGRTVASGSNDKTVRLWDAKTGGLIRTFSGHSGRVNSVAYSSDGRTVASGSYDNTVRLWNMQTGGLIRTLSVNGHSDSVNSVAYSPDGRTVATGSGDNTVRLWDAQTGALRRIKSRGNTSSASPPVAVSSHGASIASARGSDVLVSTSLKAKDGALSRHSVGQSQPQPKPAQPQPQPQPQHEPFSTRQPNKARHPNNTVVQSVVVKTHRALYSYNAGQSDELSFQEGDILNALGDETNGWIYGQCAANGQVGLFPANYVAPAQSPISPTLSSQSKPTPSNAPTNNDPVTADSLEWRVAAALEQSTTIGDAVVVALNWMQRQMAVERQATEQELRDKSVRVSRERDIRMTQVDQTHADKASALKKELGALEARMKVSPSESLQQQIDALRRRQEVLEDEYNERRAMDARQRYIDGDERLSRFYRSVLVKLQEFFLACKALDSGKITREANTTRDRVAQGIELLGDWVPFPGATTIATVLSKAVSLSSDKREEKRAANVADMVGTFREIDSVTEEVACELTRRYEEQIQSLRKDGARDLGECAVKYMMVYVSFVDTSHSTVQKMLLEAVTSVRLRTNTFDAKLITLPTFSHKAIAAEGKRDWTDEGIFLRTGIRTSDGRYFGGKKVGDARPEKYGYRLGTAHEAASLGLKETEGRVETDVAELTANALSKAARQTVKDFVADGVQAKGEMELVRRQMGAVMVRLEACEAAPSPSPKTLTLRELQATLADRLEIAKDAPELEAEFAKIRAKYGALANTSHLRTKGVPAEVDDGVAALIHDYLRRQ* # PASA_UPDATE: g444.t1, single gene model update, valid-1, status:[pasa:asmbl_2406,status:12], valid-1 NODE_1707_length_9583_cov_40.9076 . gene 1708 4427 . - . ID=g444;Name=g444.t1 NODE_1707_length_9583_cov_40.9076 . mRNA 1708 4427 . - . ID=g444.t1;Parent=g444;Name=g444.t1 NODE_1707_length_9583_cov_40.9076 . five_prime_UTR 4346 4427 . - . ID=g444.t1.utr5p1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 4266 4427 . - . ID=g444.t1.exon1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 4266 4345 . - 0 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 4004 4158 . - . ID=g444.t1.exon2;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 4004 4158 . - 1 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 3687 3829 . - . ID=g444.t1.exon3;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 3687 3829 . - 2 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 3197 3277 . - . ID=g444.t1.exon4;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 3197 3277 . - 0 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 2732 2904 . - . ID=g444.t1.exon5;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 2732 2904 . - 0 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 2302 2443 . - . ID=g444.t1.exon6;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 2302 2443 . - 1 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . exon 1708 2079 . - . ID=g444.t1.exon7;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . CDS 1831 2079 . - 0 ID=cds.g444.t1;Parent=g444.t1 NODE_1707_length_9583_cov_40.9076 . three_prime_UTR 1708 1830 . - . ID=g444.t1.utr3p1;Parent=g444.t1 #PROT g444.t1 g444 MFSPVRLCALRLARVRSVAPFKQHCASISTFRPPRATLPVTTAQTTRLFATGRGRSVASSKEEEEYDDDEGVDIPEKAPSALQKATMAQQHLVAVKDFTSDSFSKSVNDSFTIDDLFDARVHLGHKRGLWNPKVAPFLHGVHHDMHIIDLEKTVVAMRRALHVVREVAYNNGIILFVNGRRHFDHITRYTAIECGEYYATGRWQPGTLTNSMFVTGAQIVPSLMIFTAMQPSKNALSEARAMKIPSIGIVDTDCDPDKVIYAVPGNDDSPAAMRLYYKLFKAAVLDGKKRRAHDLPASVPFRDEQPFVVDASRLPATHLTEAERKEETDRYGPNWPPRFQ* # ORIGINAL: g445.t1 original gene structure, not modified by PASA NODE_1707_length_9583_cov_40.9076 AUGUSTUS gene 6198 8815 . + . ID=g445;Name=g445.t1 NODE_1707_length_9583_cov_40.9076 AUGUSTUS mRNA 6198 8815 . + . ID=g445.t1;Parent=g445;Name=g445.t1 NODE_1707_length_9583_cov_40.9076 AUGUSTUS exon 6198 8588 . + . ID=g445.t1.exon1;Parent=g445.t1 NODE_1707_length_9583_cov_40.9076 AUGUSTUS CDS 6198 8588 . + 0 ID=cds.g445.t1;Parent=g445.t1 NODE_1707_length_9583_cov_40.9076 AUGUSTUS exon 8729 8815 . + . ID=g445.t1.exon2;Parent=g445.t1 NODE_1707_length_9583_cov_40.9076 AUGUSTUS CDS 8729 8815 . + 0 ID=cds.g445.t1;Parent=g445.t1 #PROT g445.t1 g445 MATATATRGDVADATTAIRQEGAPTAADAHRKDETAQQGTRHGALGQLPSFRLRPMRSKQLNFTHDIAGHSARKQEESIRNLLDDLTNARTSVVAALGDCSTRIAGAEDEDEERPQRGGCFGLFRSHKHADAHTHTHTEQHAPSAAADASEDGGGSVALLDEARARMERYMSLLAGLVYAEGGESPLLHAVNFEWSHPFTDKASFVGHKDARFEAMCMTASYAMVACSAGHVDANDKGSSERRIRSLEFAAGRLRYLNDREWMRMDAKCQAHPGCQRVILGALIRTCTGFAAETKLAALHHVTAASGAAATSGTASSQSQMHVTSDPHRLADYRVRLAAQAYLRYSAAHADLNTLDMKARRDGVNRWMAALAFRSQFFLAMVYRMVGLQRHTSGYVGEAICMMQRALAILNEAEAAHTVATNSAMMHGAAMADIRTSLEAAKVEMNADLATWRARNAGPDAQRIPDHVPTLDIPAFDTTDGALPDERPFPATDPRWTAAAYDALGRKKRHSVRGESAAATQGQGHGHAGAVAAGAVGTAGVAGGAAAAHAVQAQQAPMDRVTQAPTTTGSAQASSGPAAANDAMREGAAPVGTAGMHVPTAQGPASAANAMKKAGGMAAGGMAAGGMATGVVSGQLTGDGDRGTDARGPASANEAMKTAGGMGTPSAIPAPELHFATVPASLTETVHTHSHVMMKDNTQAAMRTGSTPPSKGLPRKDSASGGMEMQPMAALQRGAGNASTTTASGVPSAQTQSAPPVSATATADAAPTMTLAELEAATMRLMGMSSYLGGPNAEPEAGSADVQSMDKNVAQAARTTMHKAASKEE* # PASA_UPDATE: g12020.t1, single gene model update, valid-1, status:[pasa:asmbl_8593,status:12],[pasa:asmbl_8594,status:12], valid-1 NODE_633_length_19910_cov_42.3983 . gene 4664 7451 . - . ID=g12020;Name=g12020.t1 NODE_633_length_19910_cov_42.3983 . mRNA 4664 7451 . - . ID=g12020.t1;Parent=g12020;Name=g12020.t1 NODE_633_length_19910_cov_42.3983 . five_prime_UTR 7351 7451 . - . ID=g12020.t1.utr5p1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . exon 7240 7451 . - . ID=g12020.t1.exon1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . CDS 7240 7350 . - 0 ID=cds.g12020.t1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . exon 7024 7114 . - . ID=g12020.t1.exon2;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . CDS 7024 7114 . - 0 ID=cds.g12020.t1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . exon 6823 6935 . - . ID=g12020.t1.exon3;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . CDS 6823 6935 . - 2 ID=cds.g12020.t1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . exon 6401 6679 . - . ID=g12020.t1.exon4;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . CDS 6401 6679 . - 0 ID=cds.g12020.t1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . exon 4664 5962 . - . ID=g12020.t1.exon5;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . CDS 4694 5962 . - 0 ID=cds.g12020.t1;Parent=g12020.t1 NODE_633_length_19910_cov_42.3983 . three_prime_UTR 4664 4693 . - . ID=g12020.t1.utr3p1;Parent=g12020.t1 #PROT g12020.t1 g12020 MGIMAATVHRAQLPQLRRVLWDACGKSVLVRHSHFKKQLDDMIRVKPRIVPSWMHGIEIFHDPQFNKGTAFPQRERDRLGLRGLLPPRELAIEDQLLRAYYGLHKSGNTTEADRKSGRIENVVAKYLFLISLQDRNETLFYRLLTENLTELAPIIYTPTVGYACQHAGTLYRRNRGMYFTAEDKSDMFAIIQNWPVDDVEVIVVTDGSRILGLGDLGAHGMAIPIGKLSLYVAAGGINPSKCLPICIDVGTNNQALLDDPLYLGMKHTRISGEAYLEAVDEFMCAVRSRYPNALVQFEDFRSPNAELLLSRYRNDFRMFNDDIQGTGAVALGGILAALRAGAGADDSMRLTDQRIVCVGAGSAGIGVCNSIAHAMMNMGLSAQEAYSRFWLVDNRGLLTRARVPQLDTPQHAFASVRVEENLEGARVEDVVINARPTVLLGLSGVGGAFGETAVRAMAAGVRKPIIFAMSNPTNLSECTARQAYEWTDGRAVFASGSPFAPVEYMGKTFSPSQANNMYIFPGVGLGIIASGCRLVTQTMFHAAAETLAACIEPVDAENGNVFPRISNIRNVSKRIAAAVADVGDKEGLTTVPRPPGGWVEFMGDAMWTPEYVPLIQKRID* # ORIGINAL: g12019.t1 original gene structure, not modified by PASA NODE_633_length_19910_cov_42.3983 AUGUSTUS gene 85 2395 . - . ID=g12019;Name=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS mRNA 85 2395 . - . ID=g12019.t1;Parent=g12019;Name=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 736 2395 . - . ID=g12019.t1.exon1;Parent=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 736 2395 . - 0 ID=cds.g12019.t1;Parent=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 374 633 . - . ID=g12019.t1.exon2;Parent=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 374 633 . - 2 ID=cds.g12019.t1;Parent=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 85 159 . - . ID=g12019.t1.exon3;Parent=g12019.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 85 159 . - 0 ID=cds.g12019.t1;Parent=g12019.t1 #PROT g12019.t1 g12019 MRALLANVRPYCTWWSVFTVITIIAAGVVLPIVVYKSAADGEQKDFRTAFTEEASRTYAASQDQLVRTVGAIENLRVMNFLEQHNLSASTFHASVNLITRVAAIDSFGWIPRVLQSDKAAFELHVRQLNPEPLYRNFTITRQNLTLSDATYMPTSEGRDASVYYPILYLWPIAQPASVGVDASLFPSLFGNITRAIDSAAPTIQSDVMPGLTMRSGRGLVACMPVYRTPGTPAALQRRRDDALGVLVLSATLSVIVSTALGGTTMLHAYLFDEAGRGLSGNLAFEFGGGDDAANSTDFAAVPEVYGEKYATGLQIADRHWTFVAVPSATLRGETTSNNPAVFAALTALCMFVLLCIALLLIHLVVRANKQTGKSEYRRQRVNAMIGYVNHEIRNPLQGIIGLVEHAATIVTSASRSCSLCTQDVRMITNDLSDTLQMCDLMHHVVNDVLDIRSLEEGALVIKPEPSVIDKLVADVIAIVQLKLSEKQQLTLVAEQLQPGVVAACDPVRIKQVLLNFVTNAIKYSDHGTIRIRVDLISDQTSQWMRFSVADEGGGIPHHKQSRVFSPFTHMSTSTGKERHQGTGLGLYLCAMMIKAMDGRIGFTSASGVGTTFWFELPFVSKALSDVQDGAESELQSVYVSPATPGDNATAEDAGSIMLHTINESG # PASA_UPDATE: g12022.t1, single gene model update, valid-1, status:[pasa:asmbl_8595,status:12], valid-1 NODE_633_length_19910_cov_42.3983 . gene 15994 18803 . + . ID=g12022;Name=g12022.t1 NODE_633_length_19910_cov_42.3983 . mRNA 15994 18803 . + . ID=g12022.t1;Parent=g12022;Name=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 15994 16263 . + . ID=g12022.t1.exon1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 15994 16263 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 16443 16571 . + . ID=g12022.t1.exon2;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 16443 16571 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 16796 16901 . + . ID=g12022.t1.exon3;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 16796 16901 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 17227 17282 . + . ID=g12022.t1.exon4;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 17227 17282 . + 2 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 17637 17720 . + . ID=g12022.t1.exon5;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 17637 17720 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 17965 18036 . + . ID=g12022.t1.exon6;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 17965 18036 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . exon 18163 18803 . + . ID=g12022.t1.exon7;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . CDS 18163 18459 . + 0 ID=cds.g12022.t1;Parent=g12022.t1 NODE_633_length_19910_cov_42.3983 . three_prime_UTR 18460 18803 . + . ID=g12022.t1.utr3p1;Parent=g12022.t1 #PROT g12022.t1 g12022 MSHRSSMDSLEESSMTREEALAMVTGLGENPLPSASASASAALPPGKRHHYDEDPEEKFADEAVDPRVKGALDALNMATDDINRLEKQVSDAKLYYQGTVLETEKQLKAIAAKMGKSVMKAKPYYDAKTRAKQAQAEAHDAAKVFEKACMDYDYAKKLIKSAEEKVTKGEMSFDAAWQELMNQMTEKVNSAEVIKNKAAKEHHVRTNAAASSMKEVERLSKELKKAVEKSAPYYAARDKSDRLRDDSWAKVEKLELDYKFAKRYVADALDNLNAISMEIHDRRLREIKGLAALVQGADGPETLKLPVLEKHSIVAAPTTERRSGDGAAMELNAADCL* # ORIGINAL: g12021.t1 original gene structure, not modified by PASA NODE_633_length_19910_cov_42.3983 AUGUSTUS gene 7916 15430 . + . ID=g12021;Name=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS mRNA 7916 15430 . + . ID=g12021.t1;Parent=g12021;Name=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 7916 7987 . + . ID=g12021.t1.exon1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 7916 7987 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 8167 8250 . + . ID=g12021.t1.exon2;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 8167 8250 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 8502 8690 . + . ID=g12021.t1.exon3;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 8502 8690 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 9081 9129 . + . ID=g12021.t1.exon4;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 9081 9129 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 9275 9373 . + . ID=g12021.t1.exon5;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 9275 9373 . + 2 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 9746 9810 . + . ID=g12021.t1.exon6;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 9746 9810 . + 2 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 10266 10346 . + . ID=g12021.t1.exon7;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 10266 10346 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 10606 10701 . + . ID=g12021.t1.exon8;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 10606 10701 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 10930 11061 . + . ID=g12021.t1.exon9;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 10930 11061 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 11281 11349 . + . ID=g12021.t1.exon10;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 11281 11349 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 11491 11617 . + . ID=g12021.t1.exon11;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 11491 11617 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 11902 12089 . + . ID=g12021.t1.exon12;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 11902 12089 . + 2 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 12406 12444 . + . ID=g12021.t1.exon13;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 12406 12444 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 12524 12631 . + . ID=g12021.t1.exon14;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 12524 12631 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 12907 12982 . + . ID=g12021.t1.exon15;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 12907 12982 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 13187 13353 . + . ID=g12021.t1.exon16;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 13187 13353 . + 2 ID=cds.g12021.t1;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS exon 13547 15430 . + . ID=g12021.t1.exon17;Parent=g12021.t1 NODE_633_length_19910_cov_42.3983 AUGUSTUS CDS 13547 15430 . + 0 ID=cds.g12021.t1;Parent=g12021.t1 #PROT g12021.t1 g12021 MEGVEIQQVVIRGTETVKEPKAYTVYRIEVFTRTSHWCVLRRFSEFHDLHETMIRAYGVAKDALPQKKMFGSMTAETIELRRQQLEGYLQSLVASKNRHVASANELMAFLDVHSHDVVGATQSLTEELYYNGEAILESGRPFPTTPMQLAGLCKRLKIAGNQLSDASLSVEKRRLFEFVTKLTHLKIRSPDEDAQQSKMVYDLSVFKALTMVEIDGCDVSAIEGLRSLQSRLLHVSVRHSISALKDFLVDCVSVMGLNANSLDIVVHAWSAVVFADFSHNNLPAADDSIKLLPSLETLNMSHNNIVVIPPLNSLRRLIRLDFSHNKIRSIEGLADALPQLTSLVLKSNKIENLQGLERLECLSVLDLSDNCISDIRETNHLGALARLESLALAGNPIASHAKYRAHVFGVFLAVDKKIILDGQSPTQKDMDKIQEITIKLAQDHAIALTNDNDIEVAHLPCSPTKKRTSKAKNRVAVIETARSPSFRGSVSEGVDAGESSSADRDAYRDEIEELKRSEGADWLKKLNERMSYAPEFQLEPPPPKEQPATATSPRRPKKKKAAGAVLRQDSSGASKERDSFKHSASGDSLDSSAPPSPSPQSSGRSTMHSFGDSGVGAPDAPSNLYGGTPARRPSASVDVSVRVEPPPSAVETPEEKEVRRQREFVQTLEGAMRGKGAASAKSAVHMARAFRAGDTDGFDCVLNVDVGRASVTEVDADTGRIRTKLSARALASATPALAARGPSVTLTFTDGTVDVEYAMESARACGELLAILSQFVASPPAPSADAPSIATQQPQQQQQRDALPQPRRDRDLSAQGEGGSPWGSVADGLLPLTTPLVSHLKQTIFAAGPDERCECVLRTPVVLYGDPNSKEHIMCVVVSTAGMYLVSPAKPGRRADRRVAGFRLEDLRFVNVGLFDQSLRLEFGRQSTYTLLTRDHGITNAFTDALSRALTARVAAESGVASEASSVRRSMFFAEADEEDVGRFEFKFKSGTTAFSYPSTDTVDVLRYQLTRAFPADDPRRTDFQVFNYILCFQQRPPAPAPSGASLSASGATAKRSKPAARTLVLSGDTVYLCDEDHAHWPLPQFVTIVPSSSQYTVVGCHKVGAVVGVETCESAPCDFVLLFDTGRGFSATETWHIATKKREQRDQFVRVLARLWADLFKESLQVSSVPAWT* # ORIGINAL: g13974.t1 original gene structure, not modified by PASA NODE_2601_length_5726_cov_34.7654 AUGUSTUS gene 292 1186 . + . ID=g13974;Name=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS mRNA 292 1186 . + . ID=g13974.t1;Parent=g13974;Name=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS exon 292 406 . + . ID=g13974.t1.exon1;Parent=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS CDS 292 406 . + 1 ID=cds.g13974.t1;Parent=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS exon 718 813 . + . ID=g13974.t1.exon2;Parent=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS CDS 718 813 . + 0 ID=cds.g13974.t1;Parent=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS exon 989 1186 . + . ID=g13974.t1.exon3;Parent=g13974.t1 NODE_2601_length_5726_cov_34.7654 AUGUSTUS CDS 989 1186 . + 0 ID=cds.g13974.t1;Parent=g13974.t1 #PROT g13974.t1 g13974 QDYSIGGGYLEEAFFLYMRCACASMETLATGLGPRLNAKGVFSPEEELCAKNLAGNHVNNLLSTYDTSVDDDFIALRRLNTLIKNSVTTVSETFIRRRTLLLLVMGEKVALLDLVNGIGTTVSRLAEASKADLDM* # PASA_UPDATE: g13975.t1, single gene model update, valid-1, status:[pasa:asmbl_4633,status:12], valid-1 NODE_2601_length_5726_cov_34.7654 . gene 2188 5726 . - . ID=g13975;Name=g13975.t1 NODE_2601_length_5726_cov_34.7654 . mRNA 2188 5726 . - . ID=g13975.t1;Parent=g13975;Name=g13975.t1 NODE_2601_length_5726_cov_34.7654 . five_prime_UTR 5665 5726 . - . ID=g13975.t1.utr5p1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 5548 5726 . - . ID=g13975.t1.exon1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 5548 5664 . - 0 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 5058 5088 . - . ID=g13975.t1.exon2;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 5058 5088 . - 0 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 4821 4852 . - . ID=g13975.t1.exon3;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 4821 4852 . - 2 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 4351 4530 . - . ID=g13975.t1.exon4;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 4351 4530 . - 0 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 4039 4108 . - . ID=g13975.t1.exon5;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 4039 4108 . - 0 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 3413 3475 . - . ID=g13975.t1.exon6;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 3413 3475 . - 2 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 3066 3150 . - . ID=g13975.t1.exon7;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 3066 3150 . - 2 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . exon 2188 2772 . - . ID=g13975.t1.exon8;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . CDS 2688 2772 . - 1 ID=cds.g13975.t1;Parent=g13975.t1 NODE_2601_length_5726_cov_34.7654 . three_prime_UTR 2188 2687 . - . ID=g13975.t1.utr3p1;Parent=g13975.t1 #PROT g13975.t1 g13975 MHNDKTCVAVGTTDGQIYTAQVRRSDRKKFESEVIYLAKIPTMDRNSDAEKEESKTPTVAIASMLIVRDATAETDARSMPYLAMIASSLGWLHVVSLATGQEERILRPHDIRGGAKPGIKGLRLLPKEPNNESLGTGVTVDESGAIRLWDLRTGTSSKQASIVSASEPVGLVILKHAPNMGAIIGVNEFTMFSLSGTVDQNARVRSSVAPPMTAAVPPAR* # PASA_UPDATE: g14488.t1, single gene model update, valid-1, status:[pasa:asmbl_7240,status:12], valid-1 NODE_4347_length_1773_cov_37.2856 . gene 77 1698 . + . ID=g14488;Name=g14488.t1 NODE_4347_length_1773_cov_37.2856 . mRNA 77 1698 . + . ID=g14488.t1;Parent=g14488;Name=g14488.t1 NODE_4347_length_1773_cov_37.2856 . five_prime_UTR 77 77 . + . ID=g14488.t1.utr5p1;Parent=g14488.t1 NODE_4347_length_1773_cov_37.2856 . exon 77 1199 . + . ID=g14488.t1.exon1;Parent=g14488.t1 NODE_4347_length_1773_cov_37.2856 . CDS 78 1199 . + 0 ID=cds.g14488.t1;Parent=g14488.t1;5_prime_partial=true NODE_4347_length_1773_cov_37.2856 . exon 1532 1698 . + . ID=g14488.t1.exon2;Parent=g14488.t1 NODE_4347_length_1773_cov_37.2856 . CDS 1532 1698 . + 0 ID=cds.g14488.t1;Parent=g14488.t1;3_prime_partial=true #PROT g14488.t1 g14488 KSSKELHGVKLQWSERPQTVLIIKKFRDYTVSRKLKEIAAWLVAIKGMRVYVESTVLQEHVLILDNDFAPTLKQLHPLDEFCIRTISDEIDFIVCLGGDGTILYASSLFQHFVPPVISFHMGSMGFLMPFDFKNYVKHLNDVLDGHCHLTMRARLQCEIFRTSQSCRGCHASTQAGEHIHLGQGGVGLSGSPGNTAWVPHPKQQPPRGKQEQEELENERQQQQQKQQGGVDINGERVTRTRRYSNPLGALASQLSSSPSSTKTPAGTVVASGDGTFMTPNAHWTGTIQVMNEVVIDRGPSPYLGDLEVYCDGKLVTTVQGDGLIVGTPTGSTAYSVSAGGSMVHPSVPAILITPICPHTLSFRPILVPDTVEIKIIVSLTSRNMAYASFDGRNRQELCQGDGIIVKASCFPVPTVNRRDQSADWFNSLS # ORIGINAL: g807.t1 original gene structure, not modified by PASA NODE_4506_length_1527_cov_32.4146 AUGUSTUS gene 81 1408 . - . ID=g807;Name=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS mRNA 81 1408 . - . ID=g807.t1;Parent=g807;Name=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS exon 1313 1408 . - . ID=g807.t1.exon1;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS CDS 1313 1408 . - 0 ID=cds.g807.t1;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS exon 978 1067 . - . ID=g807.t1.exon2;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS CDS 978 1067 . - 0 ID=cds.g807.t1;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS exon 473 629 . - . ID=g807.t1.exon3;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS CDS 473 629 . - 0 ID=cds.g807.t1;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS exon 81 241 . - . ID=g807.t1.exon4;Parent=g807.t1 NODE_4506_length_1527_cov_32.4146 AUGUSTUS CDS 81 241 . - 2 ID=cds.g807.t1;Parent=g807.t1 #PROT g807.t1 g807 MDQHSYEANHAEPRKKDGALSMIGSFVDIVNKRASYRAVLEPMLMQYVLPEFASPHAFLRARAAWVIAQFASIPMPNSTQRMCEVLCTAMEDPDLPVRVEAFVAFQAIIDDNQLAAAFFRPHVRMIVRSLLALTKETVADDLADVLHTIVEVYRDDIVPFALEIAKGT # ORIGINAL: g180.t1 original gene structure, not modified by PASA NODE_6780_length_511_cov_224.587 AUGUSTUS gene 1 478 . - . ID=g180;Name=g180.t1 NODE_6780_length_511_cov_224.587 AUGUSTUS mRNA 1 478 . - . ID=g180.t1;Parent=g180;Name=g180.t1 NODE_6780_length_511_cov_224.587 AUGUSTUS exon 1 478 . - . ID=g180.t1.exon1;Parent=g180.t1 NODE_6780_length_511_cov_224.587 AUGUSTUS CDS 1 478 . - 0 ID=cds.g180.t1;Parent=g180.t1 #PROT g180.t1 g180 TSRKATVEVDISELEVLKSSGGGELRAMEELKRLDASISMHAVEAQRQKERSNLEIGYRYAKLEAVSLENSLREEQTKGDLGLPEMQANTQLIETKARYVSALSDFNSPGDLTALVSNIDYAGRGYHLTKGDPHVSGAKVDPGFRLPVIKRSFSQRRRT # PASA_UPDATE: g11756.t1, single gene model update, valid-1, status:[pasa:asmbl_9881,status:12],[pasa:asmbl_9884,status:12], valid-1 NODE_899_length_16055_cov_44.0757 . gene 3397 8138 . - . ID=g11756;Name=g11756.t1 NODE_899_length_16055_cov_44.0757 . mRNA 3397 8138 . - . ID=g11756.t1;Parent=g11756;Name=g11756.t1 NODE_899_length_16055_cov_44.0757 . five_prime_UTR 8095 8138 . - . ID=g11756.t1.utr5p1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 8004 8138 . - . ID=g11756.t1.exon1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 8004 8094 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 7663 7844 . - . ID=g11756.t1.exon2;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 7663 7844 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 7488 7543 . - . ID=g11756.t1.exon3;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 7488 7543 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 7255 7349 . - . ID=g11756.t1.exon4;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 7255 7349 . - 1 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 7036 7073 . - . ID=g11756.t1.exon5;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 7036 7073 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 6558 6675 . - . ID=g11756.t1.exon6;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 6558 6675 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 6275 6348 . - . ID=g11756.t1.exon7;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 6275 6348 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 5944 6013 . - . ID=g11756.t1.exon8;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 5944 6013 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 5497 5642 . - . ID=g11756.t1.exon9;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 5497 5642 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 5031 5159 . - . ID=g11756.t1.exon10;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 5031 5159 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 4782 4890 . - . ID=g11756.t1.exon11;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 4782 4890 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 4510 4599 . - . ID=g11756.t1.exon12;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 4510 4599 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 4232 4302 . - . ID=g11756.t1.exon13;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 4232 4302 . - 2 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . exon 3397 3930 . - . ID=g11756.t1.exon14;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . CDS 3847 3930 . - 0 ID=cds.g11756.t1;Parent=g11756.t1 NODE_899_length_16055_cov_44.0757 . three_prime_UTR 3397 3846 . - . ID=g11756.t1.utr3p1;Parent=g11756.t1 #PROT g11756.t1 g11756 MLSVIARTAARRSVTAVRVASASQAARTLHGTAAKSRSATSYALAAAVAASVAYTGYAIVFPQGVIPSVAAEEAVESEDAKKKKSGFKERKIVEYENRIRAYSNPERVFRYFATREINGEVYMTANDFVRSLLMSSEIQPEGRGIDQYEKVDGQRVQKYLRGQDIKSRDFIATLGDTGLFSYSDYLFFLSVLTTPERRFELAFKMFDLDGNGTVDLKEFQQVQSVVRRQAMGKRSRDRVTMHAKSATDDAPVIYSALLRHFFGSDGLQKLTLKRFQTFIFELQTEILHREFELNSSSPTSMTEREFAQVILAYANLRDEEEYIERAESRSNKVHIQFKQFMAFNSLLRNIDDLDTALGMYNAAGATISKADFKRAAKVAANVDLDNHLIEVVFNLFDRDGDGELSYREFVHIMRRRAQRGMDKSRDLGVARGLSGLMQCVKEKMKESKNR* # ORIGINAL: g11758.t1 original gene structure, not modified by PASA NODE_899_length_16055_cov_44.0757 AUGUSTUS gene 13830 15861 . + . ID=g11758;Name=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS mRNA 13830 15861 . + . ID=g11758.t1;Parent=g11758;Name=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 13830 13900 . + . ID=g11758.t1.exon1;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 13830 13900 . + 0 ID=cds.g11758.t1;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 14049 14193 . + . ID=g11758.t1.exon2;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 14049 14193 . + 1 ID=cds.g11758.t1;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 14293 15539 . + . ID=g11758.t1.exon3;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 14293 15539 . + 0 ID=cds.g11758.t1;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 15747 15861 . + . ID=g11758.t1.exon4;Parent=g11758.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 15747 15861 . + 1 ID=cds.g11758.t1;Parent=g11758.t1 #PROT g11758.t1 g11758 MDSRHIIVDESLCNALPVDISEARNIMFSLTQAKSFIAPSFSHPPSVWLPTESNNTPYIGVELQTAPKRPGEVRVAGTYAVTCSRQPVCVRTKYGCSPVPTVERIVSEYAAHCGGLTRLGHVITTGKATYDVLGNGSVADACTLAGSSNGTSCSTLSVELTWATVDKMLAPPAYASDCAISVRAVPGDRRSAAHGLFEELSVLEGLCSYLAGGAWPIVSSAPELTDAALSSLARAFVENPLVTCRRSTASMAATADADGQALSPMQLLSVRGDMDFSERLWLLLIGCSSPLEAARLANASFRLLAVGSGMPTVHKANKGAFADLVRKAISLSRARGSATPAAMRDAESSLAEEIDASCSLRDASAIGLVVALVECGVQKLARDHAAHILACEELATRGVIERLLPTKVDGEGMDTTRALEKLRGLHAVVELVTTARSLNGIPSDVLRGTIAAAVQYYVENGASVHPLFTFAMPAFSSLAASVRQICSTMLPSAWSLTASSEACSDVLVAHYGIRPLFPHTQRGKL* # PASA_UPDATE: g11755.t1, single gene model update, valid-1, status:[pasa:asmbl_9883,status:12], valid-1 NODE_899_length_16055_cov_44.0757 . gene 232 2690 . - . ID=g11755;Name=g11755.t1 NODE_899_length_16055_cov_44.0757 . mRNA 232 2690 . - . ID=g11755.t1;Parent=g11755;Name=g11755.t1 NODE_899_length_16055_cov_44.0757 . five_prime_UTR 2549 2690 . - . ID=g11755.t1.utr5p1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 2528 2690 . - . ID=g11755.t1.exon1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 2528 2548 . - 0 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 2245 2308 . - . ID=g11755.t1.exon2;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 2245 2308 . - 0 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 2048 2147 . - . ID=g11755.t1.exon3;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 2048 2147 . - 2 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 1804 1885 . - . ID=g11755.t1.exon4;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 1804 1885 . - 1 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 1580 1673 . - . ID=g11755.t1.exon5;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 1580 1673 . - 0 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 1331 1446 . - . ID=g11755.t1.exon6;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 1331 1446 . - 2 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 881 946 . - . ID=g11755.t1.exon7;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 881 946 . - 0 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 594 633 . - . ID=g11755.t1.exon8;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 594 633 . - 0 ID=cds.g11755.t1;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . exon 232 302 . - . ID=g11755.t1.exon9;Parent=g11755.t1 NODE_899_length_16055_cov_44.0757 . CDS 232 302 . - 2 ID=cds.g11755.t1;Parent=g11755.t1;3_prime_partial=true #PROT g11755.t1 g11755 MLRASPEQGHSTEMAHPIPFVPNYTLDEKHKHNLDELRKRVFANTKLTKRERLFCEDACLVRYLRARDWDVNKAEELIHGSLKWRREYKPEHIDPATLEHESSSGKLYRYGFDKQGRPVFCMRPKLQNTKNYVDQVRLTVFMLEEVFHSMDRSKGVEQMVLMIDFDGYSVMNAPPMHVSKEVMHILTLQYPERLGLAILVDAPFLFTMAYSVLSPFIP # ORIGINAL: g11757.t1 original gene structure, not modified by PASA NODE_899_length_16055_cov_44.0757 AUGUSTUS gene 10244 12131 . - . ID=g11757;Name=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS mRNA 10244 12131 . - . ID=g11757.t1;Parent=g11757;Name=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 11848 12131 . - . ID=g11757.t1.exon1;Parent=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 11848 12131 . - 0 ID=cds.g11757.t1;Parent=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 11668 11734 . - . ID=g11757.t1.exon2;Parent=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 11668 11734 . - 1 ID=cds.g11757.t1;Parent=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS exon 10244 11548 . - . ID=g11757.t1.exon3;Parent=g11757.t1 NODE_899_length_16055_cov_44.0757 AUGUSTUS CDS 10244 11548 . - 0 ID=cds.g11757.t1;Parent=g11757.t1 #PROT g11757.t1 g11757 MATAIAGIVGPTGIRTPPRVSSGRRVQSAGRSAYRVVASTSTVDETLFATPKKTRDGAERSSSAPSSGNRTKGKKNDGKLMLVGKDQIRLLRLRKNVQQNEEDEAVVLEVGEYERLKKTARQFTDYTADLESERVAAYEASIARKKRMAELDKTRKQHEQSTDMEKVDKDDEERLLSRATQMLQEEEDEIKHLNELIHNARCVAVRDIQLEQKGVISREKTEEERRLDALMEQERIRKVSEIEEREAKQKEERKRGAEILREQIREREIARLMEAELRDQETQHVIQRMEELKLEAEEELRQKKVKRMQVTKDIRESNDRQQRERKADLEREKELEGAIVHYQKAKEEARQRQQEEMERLRVARESKARLIFEANTLIQDRQIERENLLQKRALEEYEREWRQKEVKQAEERQRTLDTMRQTREQQQRDLTRQKAIQAARDRAEFDKLNEIHRQFETAEQRKRREEADARTRMAEQIRLQIDQRRAQKVEERREFFAEGARMDKEREEREKKLEEIRRRKLDALRETGVPVKYCADIERRLRRPKISITDK* # PASA_UPDATE: g12172.t1, single gene model update, valid-1, status:[pasa:asmbl_7837,status:12], valid-1 NODE_506_length_22189_cov_43.6991 . gene 14134 14806 . + . ID=g12172;Name=g12172.t1 NODE_506_length_22189_cov_43.6991 . mRNA 14134 14806 . + . ID=g12172.t1;Parent=g12172;Name=g12172.t1 NODE_506_length_22189_cov_43.6991 . five_prime_UTR 14134 14188 . + . ID=g12172.t1.utr5p1;Parent=g12172.t1 NODE_506_length_22189_cov_43.6991 . exon 14134 14806 . + . ID=g12172.t1.exon1;Parent=g12172.t1 NODE_506_length_22189_cov_43.6991 . CDS 14189 14806 . + 0 ID=cds.g12172.t1;Parent=g12172.t1 #PROT g12172.t1 g12172 MLTINAVWREIRVRGGCVLPMIWRRNLHHGRCSDATWSPACGGSLQPPSSSTDATEAVVERRPFEWATHGATTRDGLKICYDYGPMQRPPGASTADPHVPVLFFAHATGFCRQVWRPVTSELSAHMAHEAVLVDLRGHGDSSPLPSTLGADGRHVTNGDWWQFAEDISATVTHVTEERDARMSGRCSRIGVGHSLGYGLGMLEVM* # PASA_UPDATE: g12168.t1, single gene model update, valid-1, status:[pasa:asmbl_7840,status:12], valid-1 NODE_506_length_22189_cov_43.6991 . gene 82 1937 . + . ID=g12168;Name=g12168.t1 NODE_506_length_22189_cov_43.6991 . mRNA 82 1937 . + . ID=g12168.t1;Parent=g12168;Name=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 82 201 . + . ID=g12168.t1.exon1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 82 201 . + 0 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 331 434 . + . ID=g12168.t1.exon2;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 331 434 . + 0 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 606 763 . + . ID=g12168.t1.exon3;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 606 763 . + 1 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 840 1028 . + . ID=g12168.t1.exon4;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 840 1028 . + 2 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 1118 1178 . + . ID=g12168.t1.exon5;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 1118 1178 . + 2 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 1295 1494 . + . ID=g12168.t1.exon6;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 1295 1494 . + 1 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 1592 1753 . + . ID=g12168.t1.exon7;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 1592 1753 . + 2 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . exon 1845 1937 . + . ID=g12168.t1.exon8;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . CDS 1845 1891 . + 2 ID=cds.g12168.t1;Parent=g12168.t1 NODE_506_length_22189_cov_43.6991 . three_prime_UTR 1892 1937 . + . ID=g12168.t1.utr3p1;Parent=g12168.t1 #PROT g12168.t1 g12168 MALERSPEGLAAEIALEEQAIRAIDEQVLADRRKLADVSGGKAEIAEWLSRCAAGQSALAALAAGLGSDSDELKSLRDEVNAESADVAGLTAVLIRQQEEASSTRKIIADSSTRLPELEEEKRLAVAGYNFKEAGRVAALIKELSSVNTDALARIAHLEAELARTRTLLDNAKEQAERDRLRLYEMERSHDISELDRWKAVFLDLVDRLQRVRLKQSQSAGGRSDMKSVLLYEIDACRFRIMGLCAKHDVEPDIDLDADKCVDVSVVASGPRSTEIQEELVPEPTDGEVNDCARSSPILPMPSDAAITNEKIAFLQMRLQTAIEAEDYELAASLHETLQTMKGGRE* # ORIGINAL: g12175.t1 original gene structure, not modified by PASA NODE_506_length_22189_cov_43.6991 AUGUSTUS gene 17955 19043 . + . ID=g12175;Name=g12175.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS mRNA 17955 19043 . + . ID=g12175.t1;Parent=g12175;Name=g12175.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 17955 19043 . + . ID=g12175.t1.exon1;Parent=g12175.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 17955 19043 . + 0 ID=cds.g12175.t1;Parent=g12175.t1 #PROT g12175.t1 g12175 MPPKITARSAQGSSVATPPASRGLAFRVAVAALTVYAAGVCLLIVFPITQGVLVHLHIFPVPLFANLAAPELAGLPAARSFHLITPDGLRINGWHVLPAGGVAVRAMNRIHDGREDRDAVFDDALRTDGARVFLYLHGNAGSRALGHRVALYNLLASHFDAHVIAIDYRGYGDSEGWPTEDGLAIDARAAYDWAVRRREDGAASVYVWGHSLGAAVAIRLAKELSDEGTPPRALVVDAPFTRLLDGALNHPVGLLFRWVPHAAAVIDTFMADKYPSIDRVAHVHCDMLIIHGRNDAILPHELGERLHQATRDARTETMATLHRKLQLRFASFDSASHNNIYLEPRLLTEVSAFLEEKGNEPE* # PASA_UPDATE: g12176.t1, single gene model update, valid-1, status:[pasa:asmbl_7842,status:3], valid-1 NODE_506_length_22189_cov_43.6991 . gene 19532 21829 . + . ID=g12176;Name=g12176.t1 NODE_506_length_22189_cov_43.6991 . mRNA 19532 21829 . + . ID=g12176.t1;Parent=g12176;Name=g12176.t1 NODE_506_length_22189_cov_43.6991 . five_prime_UTR 19532 19669 . + . ID=g12176.t1.utr5p1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 19532 19807 . + . ID=g12176.t1.exon1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 19670 19807 . + 0 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 19978 20103 . + . ID=g12176.t1.exon2;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 19978 20103 . + 0 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 20442 20595 . + . ID=g12176.t1.exon3;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 20442 20595 . + 0 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 20799 20879 . + . ID=g12176.t1.exon4;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 20799 20879 . + 2 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 21110 21177 . + . ID=g12176.t1.exon5;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 21110 21177 . + 2 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . exon 21389 21829 . + . ID=g12176.t1.exon6;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . CDS 21389 21814 . + 0 ID=cds.g12176.t1;Parent=g12176.t1 NODE_506_length_22189_cov_43.6991 . three_prime_UTR 21815 21829 . + . ID=g12176.t1.utr3p1;Parent=g12176.t1 #PROT g12176.t1 g12176 MSLMATARACVLVGIALTMCSRALAISWPLPYERVESRPPNNPYCQALYPFCPGHTAIPVLDGDDEVEVFLLKAPVWEFKWGDLLGKFNVYHDAMGFRSRKTGANYTLEWYELHQLLNCTFPHVVAGDDGTRRPLWCNQGAACFAQGIDDNHWIENGTLAMVSVIAGAAFNDFATWARTDNDTGVYYETWTVENPATQQRYFDSYDCASFVQRAVGVLHTLGAVFDKSFTPKYTSIVLYAAEEPQLYWNGSLPASGVSAEDLPKLAELVSFYERFDAHQSLAHLLLSLLELAAVDILLEHKFYFYYNSMYFNLRLQRPFVSIRYDAIPLP* # ORIGINAL: g12173.t1 original gene structure, not modified by PASA NODE_506_length_22189_cov_43.6991 AUGUSTUS gene 14966 15737 . + . ID=g12173;Name=g12173.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS mRNA 14966 15737 . + . ID=g12173.t1;Parent=g12173;Name=g12173.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 14966 15253 . + . ID=g12173.t1.exon1;Parent=g12173.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 14966 15253 . + 0 ID=cds.g12173.t1;Parent=g12173.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 15477 15737 . + . ID=g12173.t1.exon2;Parent=g12173.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 15477 15737 . + 0 ID=cds.g12173.t1;Parent=g12173.t1 #PROT g12173.t1 g12173 MAQLANPSLFDALVLIEPVAFTPPYGRKDEYVYAMAAQKRRATFADRDVAAANFLSKEIFRRWDPRCLAAYVECGLSPTGNGAQVALKCKPDQEAEIYRMSWHALWDSAPQLRVPTVLIAASESFTHPQPFLDELARRIRGNSGGVNAMVVIDGASHLVPMESPQRIASEIAGFISAVTDKQ* # PASA_UPDATE: g12174.t1, single gene model update, valid-1, status:[pasa:asmbl_7839,status:12], valid-1 NODE_506_length_22189_cov_43.6991 . gene 15770 17583 . - . ID=g12174;Name=g12174.t1 NODE_506_length_22189_cov_43.6991 . mRNA 15770 17583 . - . ID=g12174.t1;Parent=g12174;Name=g12174.t1 NODE_506_length_22189_cov_43.6991 . exon 17500 17583 . - . ID=g12174.t1.exon1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . CDS 17500 17583 . - 0 ID=cds.g12174.t1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . exon 16927 17174 . - . ID=g12174.t1.exon2;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . CDS 16927 17174 . - 0 ID=cds.g12174.t1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . exon 16613 16726 . - . ID=g12174.t1.exon3;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . CDS 16613 16726 . - 1 ID=cds.g12174.t1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . exon 16137 16439 . - . ID=g12174.t1.exon4;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . CDS 16137 16439 . - 1 ID=cds.g12174.t1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . exon 15770 15920 . - . ID=g12174.t1.exon5;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . CDS 15863 15920 . - 1 ID=cds.g12174.t1;Parent=g12174.t1 NODE_506_length_22189_cov_43.6991 . three_prime_UTR 15770 15862 . - . ID=g12174.t1.utr3p1;Parent=g12174.t1 #PROT g12174.t1 g12174 MADETTTAPAAAPADFLCPNSVYGCEFKGPAESLDEHLTLACEKQQLKDRITAKETEVKALRDDLARHEEELNGLRRELGGPRTAPVYADNLARLTDELNRTVDNIKGSDAYKKTAEVMASVGEKTKEGFIIFTEKTKDGFNRLAQSDAIVASKAALANAGNAAQRKFEEIRFVAATGCHTHTPLNLFTRAAVRFQVHTLIVTWPWGIATDSCVCCCVLILYVVPSGRLRESDTVKSFMEKARASVDKIGGSLRRDSKGAESAPLAAE* # ORIGINAL: g12170.t1 original gene structure, not modified by PASA NODE_506_length_22189_cov_43.6991 AUGUSTUS gene 4236 12404 . + . ID=g12170;Name=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS mRNA 4236 12404 . + . ID=g12170.t1;Parent=g12170;Name=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 4236 4848 . + . ID=g12170.t1.exon1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 4236 4848 . + 0 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 5000 6048 . + . ID=g12170.t1.exon2;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 5000 6048 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 6376 6927 . + . ID=g12170.t1.exon3;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 6376 6927 . + 0 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 7105 7831 . + . ID=g12170.t1.exon4;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 7105 7831 . + 0 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 8081 8551 . + . ID=g12170.t1.exon5;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 8081 8551 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 8691 8880 . + . ID=g12170.t1.exon6;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 8691 8880 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 9041 9251 . + . ID=g12170.t1.exon7;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 9041 9251 . + 1 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 9434 9587 . + . ID=g12170.t1.exon8;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 9434 9587 . + 0 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 9709 9792 . + . ID=g12170.t1.exon9;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 9709 9792 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 10030 10223 . + . ID=g12170.t1.exon10;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 10030 10223 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 10492 10603 . + . ID=g12170.t1.exon11;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 10492 10603 . + 0 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 10808 10918 . + . ID=g12170.t1.exon12;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 10808 10918 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 11081 11161 . + . ID=g12170.t1.exon13;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 11081 11161 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 11352 12140 . + . ID=g12170.t1.exon14;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 11352 12140 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 12328 12404 . + . ID=g12170.t1.exon15;Parent=g12170.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 12328 12404 . + 2 ID=cds.g12170.t1;Parent=g12170.t1 #PROT g12170.t1 g12170 MASAASRQSLEARIRLVEEALSGRRKDVADPTVSVENLLDTLNVLYEECDSPALKKEKSVATFVEMFRGVVERIRSARFKRTDFETIKVIGRGAFGEVHVVKNKDTGRIYAMKLLNKWDMLKRQETACFREERDVLVYGDGRFITSLHYAFQDENYLYLVMEYYCGGDLLTLLSRFEDRLPEDMIRFYAAEIVLALESIHRIGYVHRDLKPDNILLDANGHIRLGDFGSCVRIPEGKMIRSSVAVGTPDYISPEILRSVEGGGEYGRECDWWSLGVVVYEMLYGVTPFYSESLVGTYGKIMNHEKSLEFPEDDEVQPSDEVRDLVRRLCCLREKRLGRANIDEIKRHVFFAGIDWDKLRDGPAPFVPEIGSAADTSNFEDIDDVPPLEKVKRPASSKAFTGDQLPFVGFTFTRESVISDRLVDANAPQPPMTTPNRRLSSVPPPSLLTVDTPPARPVPEGASASQRHSAPGDAEARARLEQQIAQLTDRIAELEEQLQLQVGASARGEDDKVVRRLEREKKELESRLDEATARLQTSEKMRKMLKDSKDELEATVSALETRTSKAKKEVADLQAEKQRLEGAAEENEEKAQEATTKLSRAERDLRERKAELESVQAQRDQAKAETLAGEKKRLELQGQLDDALAEARKERLARTKAERLLKSAEGDLEDARSRVSARGAGDAAQLQQQREREFAEERSRLEALAHEHEDALRLLTEQLAEAKAAAKEAVESRAALETEIEGLRSSLQRTRRTSVVTEDAIADVARKYDKEMESLKKAVQAAVDDAELIRTRGASEAAELKAQMERAVEKERETRQFLAEEEKGRVQLQTLLEDARRDAADARAQLEKALSSLDETKGELVDAAAALHDEKDRREKAEYTVDKLQAEVSNLRRKQETKDIDWERRRTQKVERQELKIIQQDLEAEIQAKLAIEAAFQQLKAQKEAVDREIEEVRSSHAEMETELRTLREERQEEMKKKWRKDFVERPITPASSSATLPRGASQLSVIRSSSFASGSDSVPDLREAALMGATVGRMSATTTAKVGSFVDVSSVGEDASEATNVGTTAHSHSAASAVEAGGKAHKFAVRSFYNPTKCDVCGMPLLGLMRQGIVCDDCGYNCHHNCQAGAFQRCPTPANQKGLQLRDPMQPSGVVMEGFLRVPRPGGVRKGWRRHYVVLAGAQMLLFNGEDQKQGQEIISTIDLRASDFRVENVSHADVIHANRKEIPLIFRVVYSTETSKRQIFFQADTEAAKVTWVTNIARVASIVTRESDSPLLACRALFDSASCGEPIGTVLRSVSCIVRTDRFLLFGSDDGLCCIKLYVQTGGLSKFGEGKRVAQMEVLAAEKLVVLITGKSRQLRVMQMAAFEADGGSLAPALDETKGCTFFATGTYQKVTCIAVAIKRKILLYNARSLKKLKDIPVQDGCTGAFFLAEGLCIALSGKFLLIDATSNEPKKLLDPADASTNFLFNQAQEMVPMAAFQLETSVLLCFNYIGLFVNKDGRRASDVELKWTSVPQHIAYFEPHVLAYAPDYVDVFDVRTGALVQTLALPGPAPMCRDGSMVLCTDLDVLTVVHVRDAASGPEVTLPTELIRSNSAGERPRMKRRTSAELRISISQPMNFQHVAHSGTPAASPAPPGRPSVTAESTSPAPPSSGTPTNRRSMVGGPPPPQQVSAAPAPVHVTAVPIATAVAAASAGPLTATRLPSAESGRPPVVGAPAAASVPAPTPAPAAQLSSTPAHSVPAAVSASPVAAPTAAPQPAAAAATGTARAADGAPASAPTNGGDGTADGTKGAAAVKQDFDFLTNW* # ORIGINAL: g12169.t1 original gene structure, not modified by PASA NODE_506_length_22189_cov_43.6991 AUGUSTUS gene 2405 3508 . - . ID=g12169;Name=g12169.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS mRNA 2405 3508 . - . ID=g12169.t1;Parent=g12169;Name=g12169.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS exon 2405 3508 . - . ID=g12169.t1.exon1;Parent=g12169.t1 NODE_506_length_22189_cov_43.6991 AUGUSTUS CDS 2405 3508 . - 0 ID=cds.g12169.t1;Parent=g12169.t1 #PROT g12169.t1 g12169 MSSEERAAVKRMSGAVPSNLWGGHECDELLLLRFLRYNTGEEEAAKDAAIDYLSWKRQFHVDHIGIDDVAEFLQRDLLTVTDCKDRLGRPLVVLRWCNFQPAEIEEREMLQAFAYMFERLLEITPPVFEFCAVLDYGDWSLRQTSPRLAKLSLDLAKRYPFIPHSYAVNVPWYFRAVWKVVRPWMTQAAVDKFQVMASSELEEKIDRENRLPSFGGTSKFNVADWIAGRKTAEAGKKKRPSEEESFVAAMSKLTVSADDVDSDAVKSGFLQKQGSGGYFGTTAWKARYFVISRGSLYYYTERGADKPNRVYDLATCSIEVPNEPGQKSDLFYLVSGGRKMPLAAESKDDLADWVDTLKAQCQKASAQ* # PASA_UPDATE: g12171.t1, single gene model update, valid-1, status:[pasa:asmbl_7838,status:3], valid-1 NODE_506_length_22189_cov_43.6991 . gene 12530 13767 . - . ID=g12171;Name=g12171.t1 NODE_506_length_22189_cov_43.6991 . mRNA 12530 13767 . - . ID=g12171.t1;Parent=g12171;Name=g12171.t1 NODE_506_length_22189_cov_43.6991 . five_prime_UTR 13670 13767 . - . ID=g12171.t1.utr5p1;Parent=g12171.t1 NODE_506_length_22189_cov_43.6991 . exon 13501 13767 . - . ID=g12171.t1.exon1;Parent=g12171.t1 NODE_506_length_22189_cov_43.6991 . CDS 13501 13669 . - 0 ID=cds.g12171.t1;Parent=g12171.t1 NODE_506_length_22189_cov_43.6991 . exon 12530 13278 . - . ID=g12171.t1.exon2;Parent=g12171.t1 NODE_506_length_22189_cov_43.6991 . CDS 12764 13278 . - 2 ID=cds.g12171.t1;Parent=g12171.t1 NODE_506_length_22189_cov_43.6991 . three_prime_UTR 12530 12763 . - . ID=g12171.t1.utr3p1;Parent=g12171.t1 #PROT g12171.t1 g12171 MDGYDAQREREEVADMLRRGDEVTNESLEATRRMRQMAEQSREVGAKTLEELNVQGEKLNRIDNNLDKINADMRQAERHITNMEKCCGLCVCPCNRHKNFEKSDIYLKSEFGKKSGDNIVTDQPRADGERTWGSGGDGGGAGGGAGGAGGKGGYINRITNDAREDEMDENIGAVSNILGDLKAQAHEMSSELDRQNDQLDRLNGKTDVQTARVKEANLRTTALLKSA* # ORIGINAL: g1900.t1 original gene structure, not modified by PASA NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS gene 2 4006 . + . ID=g1900;Name=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS mRNA 2 4006 . + . ID=g1900.t1;Parent=g1900;Name=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS exon 2 1364 . + . ID=g1900.t1.exon1;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS CDS 2 1364 . + 1 ID=cds.g1900.t1;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS exon 1469 2105 . + . ID=g1900.t1.exon2;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS CDS 1469 2105 . + 0 ID=cds.g1900.t1;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS exon 2286 2336 . + . ID=g1900.t1.exon3;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS CDS 2286 2336 . + 2 ID=cds.g1900.t1;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS exon 2682 3283 . + . ID=g1900.t1.exon4;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS CDS 2682 3283 . + 2 ID=cds.g1900.t1;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS exon 3416 4006 . + . ID=g1900.t1.exon5;Parent=g1900.t1 NODE_2898_length_4809_cov_100.27_potentialcontaminant AUGUSTUS CDS 3416 4006 . + 0 ID=cds.g1900.t1;Parent=g1900.t1 #PROT g1900.t1 g1900 GRHHNLGEFRQSWHADNTSAYAITNETVAAAQCITKAAPPGYRFIAARLTATIEETCQVTALIDTGTLLSVISDRHANRLLKLGRNLMQYAGGSIRTANRSQIKHLGVIQVKITLGDQHYFHKFVMVKDLDYDLILGMDFLVPHKARITLSEPATLILENAKPIPLRTNMNETVFTNSAHETATEPSDTGATTAGSARTNGRSQTTSERVQLRAQGIATDGLEIKPLSFVYIHAESAVELQPNMLYQISARTDSTGRGDAFTVGQGVVQGGAGRDPICVMISNLSVTENITLRDGQTIAEVEPLDADEYDVCDLPVGMDAAEFATLAKMSPREAVNLVNTDEAESTNNAQPLSSRIDSVMRQRGLLCVDVQAPIDETDIGQSSITTQQQRDWHTAVSAMQPQEGDETKPLPEPLEELARRFETLTKEQMPQARALLHRANRAGTFSLSTYDIGQTDAMEENGITRRSKSPWASPVLMVPKKNGKIRFYIDYCKLNTVTVKDVYPLPRCDDLINAIGTGKAYLSTGDATMGYYQVGIAEADKAKTAFATYDGLFEFNVMPFGLCNAPAVFQRMMDAVLAGLKWECCLGYLDDIIVYSTTFEKHIEDLQKVLERMVDAGLKLQPSKCHFFRKELSFLGHIISSDGIKPDPEKLSAIREMPIPTNLRELHPKQPYIVQTDASGQGLAAPDSSMPEDNIRCTPEDLMMIQTERSDPLTETIRMLKAHHTLAPLEQDERAPTVVELLAKLHLFEAHTGINMLREEQHKDETCNAYIHWLQDSTYPDFTVTGEQQRKWARRALMFQVVDGILYRIENDNGVIGEEDDTDVQVEGACAVIPKSLQAALMEGFHDDPLAGHHGRTCTYHHIAERYYWSGLKEDVETYMRSCEYAIVYVDSFTKWMEIFPVPDLTAEHLVETLLAVILRWGSMRRLVSNNASPNISQLIADVAQVVDVNQQFILPHHPQANSAVEWMMCTVKDDLASMLEGQMDEWDLYAKAVEFAYNVSQHDTTTFSHFFLNTGQQAKTPTDVSMEPDKTLGPELKSEYAQKLEDRLSTAYSFVRERLKQTTEKAKTQYNDLHRICAI* # PASA_UPDATE: g3258.t1, single gene model update, valid-1, status:[pasa:asmbl_656,status:3], valid-1 NODE_1177_length_13357_cov_42.9865 . gene 3890 5806 . + . ID=g3258;Name=g3258.t1 NODE_1177_length_13357_cov_42.9865 . mRNA 3890 5806 . + . ID=g3258.t1;Parent=g3258;Name=g3258.t1 NODE_1177_length_13357_cov_42.9865 . five_prime_UTR 3890 3942 . + . ID=g3258.t1.utr5p1;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . five_prime_UTR 4090 4137 . + . ID=g3258.t1.utr5p2;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . exon 3890 3942 . + . ID=g3258.t1.exon1;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . exon 4090 4455 . + . ID=g3258.t1.exon2;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . CDS 4138 4455 . + 0 ID=cds.g3258.t1;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . exon 4607 5080 . + . ID=g3258.t1.exon3;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . CDS 4607 5080 . + 0 ID=cds.g3258.t1;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . exon 5501 5806 . + . ID=g3258.t1.exon4;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . CDS 5501 5656 . + 0 ID=cds.g3258.t1;Parent=g3258.t1 NODE_1177_length_13357_cov_42.9865 . three_prime_UTR 5657 5806 . + . ID=g3258.t1.utr3p1;Parent=g3258.t1 #PROT g3258.t1 g3258 MSKADTTARKAEYFVKLAALFDEYPKIFIVGADNVGSNQMQQIRKSLRGRGVVLMGKNTMIRKAIRGHIAKTPELERLLPYVRGNVGFVFTKEELSSIRELVISNKVAAPAKAGALAPLDVIIAATNTGLGPEKTSFFQALSIPTKISRGTIEIISDVHLIKAGEKVGASEASLLNMLNISPFSYGLVILQVYENGTVFDPKVLDITDADLIKTFLVGVRNVASLSLQLGVPTLASIPHSLVKGYKNLLAVAIGTELTFPLADKVKEYLKNPSAFAVAAPAAAAPAAAAAAPKKEEKKEEKAESEEGDMGFGLFD* # PASA_UPDATE: g3257.t1, single gene model update, valid-1, status:[pasa:asmbl_654,status:12],[pasa:asmbl_657,status:12], valid-1 NODE_1177_length_13357_cov_42.9865 . gene 139 2605 . - . ID=g3257;Name=g3257.t1 NODE_1177_length_13357_cov_42.9865 . mRNA 139 2605 . - . ID=g3257.t1;Parent=g3257;Name=g3257.t1 NODE_1177_length_13357_cov_42.9865 . five_prime_UTR 2497 2605 . - . ID=g3257.t1.utr5p1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . exon 1789 2605 . - . ID=g3257.t1.exon1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . CDS 1789 2496 . - 0 ID=cds.g3257.t1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . exon 1255 1632 . - . ID=g3257.t1.exon2;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . CDS 1255 1632 . - 0 ID=cds.g3257.t1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . exon 913 1134 . - . ID=g3257.t1.exon3;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . CDS 913 1134 . - 0 ID=cds.g3257.t1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . exon 139 658 . - . ID=g3257.t1.exon4;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . CDS 236 658 . - 0 ID=cds.g3257.t1;Parent=g3257.t1 NODE_1177_length_13357_cov_42.9865 . three_prime_UTR 139 235 . - . ID=g3257.t1.utr3p1;Parent=g3257.t1 #PROT g3257.t1 g3257 MNDGTDGDGAESPLLPPFAHAGIMMYPSQHYAAMLAGGLAFPTFPPTAANTVMQPHLIHFYSPSQHQHQQHLHHHAPTHTYHASEEHQLAVLDSSEQADTSDTHVHKAQSHQSHHSHNISTHQQHQQHQHRTHDRSGTYAQRHGQGQHYDMHGQGGDRGAATRPNVAVVRLLLPVKSIGAIIGKGGETVKQLREASKARVVISPAVIGISERIVTISGQFEATSKALDQIARLLEESTREAASASFDTRDTDPHAPTGEGSEKSPLTSQESELEHPRAPDAPGDAFSARPGVAVRVLAHHSQIGNVIGKGGATVQQMREQSGAQIFIQPDTLPHSTERTINVVGSAESASNCLQLIARKIMESPARGQVILYQPGASAVPPFSQGGVFVPPFQPMQTQLQYSRQQGQSTPSTTRSGGRSSYGSSHAEYSPQYAPQHFQYPPAFQSYEEQQSHASQTGSAPLSPGVVAATSSQLMIPTVQLPVPVDKLGAIIGKGGASIRDIRNRSGALVRIGERVHGSDSAMVFIGGSTEARVAAHMLIMQRIHQANGPYASVVVPLTVQIQSNSEDGVPAVDSVD* # ORIGINAL: g3260.t1 original gene structure, not modified by PASA NODE_1177_length_13357_cov_42.9865 AUGUSTUS gene 9593 12010 . + . ID=g3260;Name=g3260.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS mRNA 9593 12010 . + . ID=g3260.t1;Parent=g3260;Name=g3260.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS exon 9593 11377 . + . ID=g3260.t1.exon1;Parent=g3260.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS CDS 9593 11377 . + 0 ID=cds.g3260.t1;Parent=g3260.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS exon 11642 12010 . + . ID=g3260.t1.exon2;Parent=g3260.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS CDS 11642 12010 . + 0 ID=cds.g3260.t1;Parent=g3260.t1 #PROT g3260.t1 g3260 MDPAAARHARQTALPSPRSIHNHHLAEQPTVGTTASFSAVALSVAMQPTLGSAGSEFNGVSGELKDSSINGPSTLIFAELRLASRNRVMLTAGGDKAEDRIAAARGAWRQQSVAHALDIDAWSRCAPDIYALIHEQFAAYSDGRVAECVNSSTLPFDVFLTEIARSVSLSEARVEVRVTSRNRPKSGFLLLGKLSCDFSATASEQSAGGSASHSPRLQVFAYSHDWCDGSYSFHFQGLEHLPSDASCELLVRIDFSNFAHFLTPGPNCTRRYPGVVFAIPDSPPYYQCAVTHYYSRFLILDTDLTGPSRTFGGPQGILGELIVGTLANSMSPTPTPLSVSALPEHTAAVLPSDSRSGLSQHKQPASGGSGISTRASPTDDTAFGSGEATDMANLERIDHEDTPVCRGGSSHAGRWLLRPRGIIDPELCRVTASAGNSTPGAAMVPMWTIVENYVWCPFSCRLRALRPVDIEMCFQRKQFRKILFIGDSRTRDLLFDLGWRLLLGRGPQNLACPWPAFRVGDNCTFTVHGATFEQLHLFGLFRQPSDILRDVTQCNYNLNSRIEADYFALRQSLKRHRGLDALRERFLGDGASSYDPMFTDDDFEEFVLTAVRIMLSAAARPRVFVYHTAPAVATGMATYYNGIKENVRLARINRRVVGAIRKLIPDLLVFDMFGLNIGRADFHADYAHFSPKLPGNPIPLIGSESNLVLLNMLCNED* # PASA_UPDATE: g3261.t1, single gene model update, valid-1, status:[pasa:asmbl_655,status:12], valid-1 NODE_1177_length_13357_cov_42.9865 . gene 12177 13032 . - . ID=g3261;Name=g3261.t1 NODE_1177_length_13357_cov_42.9865 . mRNA 12177 13032 . - . ID=g3261.t1;Parent=g3261;Name=g3261.t1 NODE_1177_length_13357_cov_42.9865 . five_prime_UTR 12953 13032 . - . ID=g3261.t1.utr5p1;Parent=g3261.t1 NODE_1177_length_13357_cov_42.9865 . exon 12938 13032 . - . ID=g3261.t1.exon1;Parent=g3261.t1 NODE_1177_length_13357_cov_42.9865 . CDS 12938 12952 . - 0 ID=cds.g3261.t1;Parent=g3261.t1 NODE_1177_length_13357_cov_42.9865 . exon 12177 12590 . - . ID=g3261.t1.exon2;Parent=g3261.t1 NODE_1177_length_13357_cov_42.9865 . CDS 12276 12590 . - 0 ID=cds.g3261.t1;Parent=g3261.t1 NODE_1177_length_13357_cov_42.9865 . three_prime_UTR 12177 12275 . - . ID=g3261.t1.utr3p1;Parent=g3261.t1 #PROT g3261.t1 g3261 MVPNQYGWKETRFPLERDPAIPTAENALRVRKASLCAPVLGAMLAQAKLAVASGTSGALSDSISESDEGTDDSKDVKGTDTASASRADRPLGLLELVDEDAEDEFLAQS* # ORIGINAL: g3259.t1 original gene structure, not modified by PASA NODE_1177_length_13357_cov_42.9865 AUGUSTUS gene 6490 8794 . + . ID=g3259;Name=g3259.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS mRNA 6490 8794 . + . ID=g3259.t1;Parent=g3259;Name=g3259.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS exon 6490 6990 . + . ID=g3259.t1.exon1;Parent=g3259.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS CDS 6490 6990 . + 0 ID=cds.g3259.t1;Parent=g3259.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS exon 7220 8794 . + . ID=g3259.t1.exon2;Parent=g3259.t1 NODE_1177_length_13357_cov_42.9865 AUGUSTUS CDS 7220 8794 . + 0 ID=cds.g3259.t1;Parent=g3259.t1 #PROT g3259.t1 g3259 MTGATLLQRAASANCGTNWLLPKLLISLIVAAFIVVGLIFTISDDSSGKHATLRADHEASFESEVYVIANQPVGKDAEGSSGVNSSVGSGDIARRLARFFKVDGLSIASSGPPLHATSTTEWMQALLPAGSPLQVNWITEPYQSGRNESDAAKRVTDAMIIRDVTVVRIETKYALFMNNDVFALHPSSLRELYAAAEWEEPYGAVYLPYVLELKLGRISIFHGGEVINASYIQAANGVTEMRINKDFTRRGADERRLAFPDRVTEQTTVLEDHVFFVRDPQRTGMALFDPSASLTRELVDMMMNLRYEGMRCIEVFKSWWALALTSGGSHEDMPYMAWRRSDYMAGATVRYIRQKWNMYFLYGGFHVSFRTTNSMRDLAWSTLKRNLPTSPCEAVTLVTSASVLIGFNMLDISADNLDRCDRLEYSHDQDSPARRGIKIEPPSRPRPPADVGGPSSPLGKIALTDVWWHDAYHVLPCVCRAAQRVGGAGGPGVRLRVAATLQVDRTAQISLPHLYSAAENEKRAKAVRDGLFGPVEISNKTLEVNPLADEITFFPDIAAVHVFGLPYLPSSAIVNASSLCWSSDALATMDCLGWFRTVDQDAQTSLSVLARVQSAVLGSRTKQQPPVAGKPFGLTIIRRQYTERMPLVIIDGIVSDFSAVKVVFGSTSATAIAKAVEACATTAGRQGGVLN* # ORIGINAL: g2129.t1 original gene structure, not modified by PASA NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS gene 3984 11082 . - . ID=g2129;Name=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS mRNA 3984 11082 . - . ID=g2129.t1;Parent=g2129;Name=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 10935 11082 . - . ID=g2129.t1.exon1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 10935 11082 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 10672 10728 . - . ID=g2129.t1.exon2;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 10672 10728 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 10369 10513 . - . ID=g2129.t1.exon3;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 10369 10513 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 9963 10071 . - . ID=g2129.t1.exon4;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 9963 10071 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 9731 9773 . - . ID=g2129.t1.exon5;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 9731 9773 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 9498 9554 . - . ID=g2129.t1.exon6;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 9498 9554 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 9090 9375 . - . ID=g2129.t1.exon7;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 9090 9375 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 8834 8898 . - . ID=g2129.t1.exon8;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 8834 8898 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 8431 8684 . - . ID=g2129.t1.exon9;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 8431 8684 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 8103 8269 . - . ID=g2129.t1.exon10;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 8103 8269 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 7674 7856 . - . ID=g2129.t1.exon11;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 7674 7856 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 7074 7463 . - . ID=g2129.t1.exon12;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 7074 7463 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 6765 6936 . - . ID=g2129.t1.exon13;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 6765 6936 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 5977 6618 . - . ID=g2129.t1.exon14;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 5977 6618 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 5636 5794 . - . ID=g2129.t1.exon15;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 5636 5794 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 5387 5539 . - . ID=g2129.t1.exon16;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 5387 5539 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 5253 5274 . - . ID=g2129.t1.exon17;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 5253 5274 . - 0 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 4776 4866 . - . ID=g2129.t1.exon18;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 4776 4866 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 4531 4592 . - . ID=g2129.t1.exon19;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 4531 4592 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 4187 4343 . - . ID=g2129.t1.exon20;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 4187 4343 . - 2 ID=cds.g2129.t1;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 3984 4023 . - . ID=g2129.t1.exon21;Parent=g2129.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 3984 4023 . - 1 ID=cds.g2129.t1;Parent=g2129.t1 #PROT g2129.t1 g2129 MPIPPNLAYVGVQYAASGRSCCKGCKDELRKGSLRMITSYSGDYDTSYWHSRCFFDRYKTLQSPDEVSGFTSLRPSDKERLKNTIERHYTPVAPKPVQTFGGGLFGAAPAPASSGSHRSNDFDFKLEYAKSNRSKCTTCFALIDQDTLRFARMVQSPHFDGRVPKWSHYDCFFKYPVRINSTSQIDGFNAVRWADQEKTCRKLGIPVPAAAAAPAENAGEGQGDGDVGGPSSVHAAGGDNADDGGKPMEVDAQNAPPVASAAEPAGPPPSLTVECAAHNRASCKTCKKKIEKGEARVGREEAKGKSTTTSWYHRDCFMANAAELANGAAVTRDLLRGFCDLPEAEQKAFSLDDRKRKAETDAGPGAKKPRTDGDVSVVLKTQNERVWKVRDALKDALLPGEMRTLLKHNGMETKGGVDTLVERLTDAMLFGVPLNHAECGGALRFAEQGYVCTGQATEWAACDFATRTPTRKVFQMLDDGFDESVPALLKNLEFNVNERLFAGSAERYRAPVPAAGVEGKPLAPYKVIVVGKFDRAIVKIHADLKSLGATTTTTFTRDTNLCIAAASALSGVTMGYVRSQLDGRIVEAMNAKVPIVTEEFLKEAMTTQTAPKPSDYLAYDPNAVAQQQQQAAIAIPTDPKFASLIVKGRAAVDPQSGLADTYHVLEDGDEIYSATLGLVDVAKDINSFYKIQVLQHDKFAKEYRLFRSWGRVGTGIGSFKVDNVGAAKATVKHFMAVFEEKTGLTWDTRSSGTKIPGKFFPIEIAYKSPNVQVNPTMPIGTNSKLPVQVQDLMKALLDVKAMQRALQSYDIDMNKMPLGKLSAAQITSAYSVLSDLQRLLETEAPRKTQLVAATNRFYTMIPHVFPSGQIVLIDTIEKVIAKTHMLDALMEMEVAAKMMEESRAAEANSDEDPLDASYHQLHTDIQVLPRDTDDFKMIETYLINTHAATHSHYGLEIMEAYRVEREGEGGRFKAKQAIGNRKLLWHGSRVTNHAGILRTGLRIAPPEAPSTGYMFGKDMVSKSANYCFVDGYDPHGYILLADVALGDTYELTHSEFVTKLPDGKHSTKGLGSTHPDPTVTQVIPPDGVVVPLGKGVPSNVKNTSLLYNEYIVYDVSQIHLRYLLKVKFNYGRP* # ORIGINAL: g2130.t1 original gene structure, not modified by PASA NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS gene 11871 12587 . + . ID=g2130;Name=g2130.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS mRNA 11871 12587 . + . ID=g2130.t1;Parent=g2130;Name=g2130.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 11871 12587 . + . ID=g2130.t1.exon1;Parent=g2130.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 11871 12587 . + 0 ID=cds.g2130.t1;Parent=g2130.t1 #PROT g2130.t1 g2130 MRFDNGRTVTTKQKEAIQLAKELFPQFRKVADSVLKPLERTREPMPARPVPENGAVVARRSVPSMLAMAKNSRSSWTELYRLMSNKSITCPTILHMAAVMGLESVVHWLVRSVCVEYRNPRTNMTALAELVYSRLGTGSASTDDYDRWNSIITALWNPTAIEDCVPMIVEFATSHSMDTRVYEAIYELLYMFVHVAHRNTKDAVRLLCGNGNINVIALHNAGHHNFARLLQIVPVQAV* # PASA_UPDATE: g2128.t1, single gene model update, valid-1, status:[pasa:asmbl_8479,status:12], valid-1 NODE_611_length_20249_cov_22.0993_potentialcontaminant . gene 1356 2540 . - . ID=g2128;Name=g2128.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant . mRNA 1356 2540 . - . ID=g2128.t1;Parent=g2128;Name=g2128.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant . exon 1356 2540 . - . ID=g2128.t1.exon1;Parent=g2128.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant . CDS 1443 2540 . - 0 ID=cds.g2128.t1;Parent=g2128.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant . three_prime_UTR 1356 1442 . - . ID=g2128.t1.utr3p1;Parent=g2128.t1 #PROT g2128.t1 g2128 MAAESVCDVQCWSRAHWNYVGVAFPTVLLFYVYFLATVSAALWQDLDDQLDVRYTSHYFLVDPVVKASLVVLRVFFTHATEAYLAIMCAICILMAAYNWRRAPCYVAWANTPFAMDGVGVGCAHRHVSPGRHSKGVLYGAPATWIVTAVLIFVYLRRYPAAVLLLRHRKGSSDSRTQDMFMAMKKVLTARGSISVAMFSRGDHGSTSSEIGGWSRPSMRRSLAGTELLAMLQAGTSLDGHVAVVWFEDCVNRKASWPIWYEGAENDASFVTAVKEVYKEAASLASSGAWQDKRPTCAVPEAATIIHANWVAEVQMGQVDEAPVDILVAGARESEELYVASPSELDETAAPVKLEMAAYTHLRCGL* # ORIGINAL: g2131.t1 original gene structure, not modified by PASA NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS gene 13368 19517 . - . ID=g2131;Name=g2131.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS mRNA 13368 19517 . - . ID=g2131.t1;Parent=g2131;Name=g2131.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS exon 13368 19517 . - . ID=g2131.t1.exon1;Parent=g2131.t1 NODE_611_length_20249_cov_22.0993_potentialcontaminant AUGUSTUS CDS 13368 19517 . - 0 ID=cds.g2131.t1;Parent=g2131.t1 #PROT g2131.t1 g2131 MADAGPPSPLHRGGLKRPQSPTQTIITDGREQPPKRQRTDSGTPARGGTRAVSGTKRPLTVENNPECAFFNRIWSQLWSKLDIVDLTLEDSAADQRTSLQGSVLFLLSSSVASLSDKDVRWFSDKVALGGNLVYALGCLDEAGILPKTNAFIELARGKRAFKETFKRVDGIMILDEHIKKSIVRDSLNELRKRSTNDVVSVILAPGDRPAVVGILADDSFGTKLYDAAATLGIRFVTCTPADVDVLTNETEPDETNSDSGDETPPISDALKKVVIIKEEQVERPPGLSHLPEEATKPRSDKIFPLQQCIGDVLFERIACILAAKNTPLKTFKRFVFRVMTAKYTMLETQTADRLKDIEDIFDTEEWRTSHVQEVERGDGANTAAPVGSGVDRMAYSKEIEQRMHNFYAQLINDPSTLGLIIVDECHYAVTANQAYDVFANLASPTKSEDFKWSVNMIDDLRAMWKKRGMAGMLTSCHQIGNLVVLLVSATPYNQLSASTRIPVRHLVSSGDTTCLKAEKDVTDGDCVIARDAHVVDWSEGQLRMSEPFRLLVAPTAMGSDDWAYLRAENTTGVWRLSFSAIPPSDPFIQAMDAVAMLDSPHATFTFNAATKALSVSIPQGNGISSEAFLCVEGNTVALVDTFSSASKFELDRRVAYDVLRIKMVGRDGWVGYDKKDRSLAIAGKEQLGMCTEFLVCPSGRTPYYRSVNFYINSMRNRATENALVRGDPFLPKVMQQKTDSDGSIQLSRDVALACDYVYSIVRFAVFFECCLANEVAGTPRARPEERLKELLKNSEKWWRKCGERVRGTMEDMEKTVKLPLNEYCRKYGETLSADASPWAYVLHAPTTLLRLGDTWRNARDVLCGFHSGCLKTEFLSSRTETDVIVSNLISERVKREDGKPYMKGNTKIVRTSSVADGNRLFESICLAIMKTGMGKVFAVIRDFDNKALDDFFKEASGLSDYERRCVEEKRHWLQLLQPPDHKCVHASCECKRVEMSIESWNCEQCGHLHKPIRQYEDLEDLPCILILVDKGGMGNTFPRTFDCMDLRTSYNSSVGELSTVVQELGRMCRYAAPDNDRVPYALVGDKLVTLLKQGLLSHYAIRIMFRSHDRYLSSRDTDPSYPWRYTCRPKLTLNGNTGGHFDASDRAIPYHDARLILQAEPQVGKTGTYLALLQRFRRLIDQPDVRMPVYEVDVDNAFDERLWAYPCWKDIDEDRTMKTYNPGKSKYDLLCERPYANDFKFTRGELDKLSTRAASAREECEGGTRTDDTGTPAHDIPATDFKHELKQLGSRGSDAGGVRTGTIEVQVRNRGMEHARISVPMKHDGLVTWRDGVCSLKPRQRTSPGVHFWIFQVSHPPAGRSAAYARLDLSDAMDRMAYAQAVVCRKIDDYRCWAASIILIELPETLPSVEDVGEVDKVTWGIGFARRFIQLIAETHNLHRIFVLDDNIEHMAEIVLPPQQRVRNDGTISRVLVTKPCSMWTVLERMQSQMEGVVIDDGLDLDGLLVSRRIKAHPNNPNANKAMWRHAGEPGTYALLGTARYTNRAITKTPFSQRHIFSFALVNVRAMKEASQRRKVSLLYPPWPFREDLALNDACVSAGLRLCKYNRFIQVKRPSRFRANKGKEGDGAARSIESHRKAADEAKAEAQCTIGIGYEDGGMETNAVSAERYRKAAEQGDADAQFNLGRCYDNGEGVGKDVTKAVSWYRKAAEQEHMDAQVNLGVCYQYGYDGVKEDAEKAVSWYRKAAEQGHADAQFNLGVCYADGTGLVEKDAEKAVSWYRKAAEQGHADAQFNLGVCYDNGTGVEEEDAEKAARWYRQAAEQGHADAQFNLAICYDNGTGVEEEDAEKAVSWYRKAAKQGHADAQVNIGVCYAHGTGVEEDAKKAVRWYRKAAKQGHADAQFNLGRCYDNEEGVEEDAEKAVSWYRKAAKQGHADAQFNLGRCYDNGEGVEEDAVKAVSWYRKAAEQGHADAQFNLGVYYHCKGDGVEEDAVKAVSWYRKAAEWEHANAQFNLGCCYADGTGVKINATKAASWFRKAARQGHADAMRRC* # PASA_UPDATE: g6468.t1, single gene model update, valid-1, status:[pasa:asmbl_2286,status:12],[pasa:asmbl_2288,status:12],[pasa:asmbl_2293,status:12],[pasa:asmbl_2294,status:12], valid-1 NODE_166_length_33803_cov_41.5531 . gene 18418 22874 . - . ID=g6468;Name=g6468.t1 NODE_166_length_33803_cov_41.5531 . mRNA 18418 22874 . - . ID=g6468.t1;Parent=g6468;Name=g6468.t1 NODE_166_length_33803_cov_41.5531 . five_prime_UTR 22436 22874 . - . ID=g6468.t1.utr5p1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . five_prime_UTR 22253 22308 . - . ID=g6468.t1.utr5p2;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . exon 22436 22874 . - . ID=g6468.t1.exon1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . exon 22106 22308 . - . ID=g6468.t1.exon2;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . CDS 22106 22252 . - 0 ID=cds.g6468.t1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . exon 21544 21852 . - . ID=g6468.t1.exon3;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . CDS 21544 21852 . - 0 ID=cds.g6468.t1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . exon 21044 21206 . - . ID=g6468.t1.exon4;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . CDS 21044 21206 . - 0 ID=cds.g6468.t1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . exon 18418 20607 . - . ID=g6468.t1.exon5;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . CDS 19130 20607 . - 2 ID=cds.g6468.t1;Parent=g6468.t1 NODE_166_length_33803_cov_41.5531 . three_prime_UTR 18418 19129 . - . ID=g6468.t1.utr3p1;Parent=g6468.t1 #PROT g6468.t1 g6468 MEPRRFSEKIALQKQKQAEQQREFQNILNEMSQQTHAIETMMDRDQQVQMRVHHHQQVQQQQQQQQQQQQQQQQQQQQQLQLQMAQIQGLATRAISLDLQNVLGELDELQLQSPRASHNSLEVDLSRRSKSVSPKPRRRSGDAGLPAEVWHISDPTTMMLQSNHLAAPSPGARRRMNSLDSASPTSELPQRHANIGIVKSPNGRRRASSDTGNPVGPVVKRPNGVYDAAPTSIRTKRRSEPCIPEHMPLSIDVSGMGDNEKNGSLSDLAQPLAMSCPVIAPLSPPKESSQSESAAAKQKKQQQLYERRLQSQLHLPQGALQLSTSSPIQILPVTVDPRTNTLRASSTTAALISPRMLQQYRQQQQQQQQQQQQQQQQQQQHQQLQQLQQQQQQLPPQQLVQFGGEQAIYVVQPHSPHTQGPVGVVLPAQLAQISGQSPGTYTLSSPRHGHGGIVGMQGHIGGGSGNVPVAIAPSSMQNGGRSPRLSLSSDSETLAAVHAHVTAAANAHQMHDALSNSLDQARHHLQQVHQQQQLHQQQQHQHQQQQLQQQQLQQQHQLSQSMGKQSKTLIDRRSSRESIDNGGRVAMDIVHGVIGIPPSFADSTTSDVVGESYMQEQMDSSIPSILLSDGSAFDDVNTDFVTASAAMDIGPGGLTQSVSDDSLSNLLGDTLDDLGLVNAEDMLAVLGDDMFTGAGMME* # PASA_UPDATE: g6463.t1, single gene model update, valid-1, status:[pasa:asmbl_2290,status:12], valid-1 NODE_166_length_33803_cov_41.5531 . gene 261 6742 . + . ID=g6463;Name=g6463.t1 NODE_166_length_33803_cov_41.5531 . mRNA 261 6742 . + . ID=g6463.t1;Parent=g6463;Name=g6463.t1 NODE_166_length_33803_cov_41.5531 . five_prime_UTR 261 261 . + . ID=g6463.t1.utr5p1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 261 361 . + . ID=g6463.t1.exon1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 262 361 . + 0 ID=cds.g6463.t1;Parent=g6463.t1;5_prime_partial=true NODE_166_length_33803_cov_41.5531 . exon 658 770 . + . ID=g6463.t1.exon2;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 658 770 . + 2 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 1075 1119 . + . ID=g6463.t1.exon3;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 1075 1119 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 1407 1566 . + . ID=g6463.t1.exon4;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 1407 1566 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 1822 1877 . + . ID=g6463.t1.exon5;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 1822 1877 . + 2 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 2151 2237 . + . ID=g6463.t1.exon6;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 2151 2237 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 2464 2582 . + . ID=g6463.t1.exon7;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 2464 2582 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 2901 2987 . + . ID=g6463.t1.exon8;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 2901 2987 . + 1 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 3194 3261 . + . ID=g6463.t1.exon9;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 3194 3261 . + 1 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 3495 3661 . + . ID=g6463.t1.exon10;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 3495 3661 . + 2 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 3824 3949 . + . ID=g6463.t1.exon11;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 3824 3949 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 4306 4374 . + . ID=g6463.t1.exon12;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 4306 4374 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 4854 5048 . + . ID=g6463.t1.exon13;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 4854 5048 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . exon 5505 6742 . + . ID=g6463.t1.exon14;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . CDS 5505 6269 . + 0 ID=cds.g6463.t1;Parent=g6463.t1 NODE_166_length_33803_cov_41.5531 . three_prime_UTR 6270 6742 . + . ID=g6463.t1.utr3p1;Parent=g6463.t1 #PROT g6463.t1 g6463 ELPESVQDIVIKVCNSKRDIGTALFSDTKDPRIGRVRVAINSLDPDVAKEEWVNINGDTNQGSLRLKVKFTDELIRPMSYYSKMLTILEMDFSTFTAIANAVPTADRETLAKTLINVYHARGKALDFLQALCAAEIDATDDPNIIFRGNSLATKAIDQFMKLVGMKYLHNTLGAMVKTIYESKSSCEVDPSRVGAAGGDVKANWKRLMTHMNNLWNAILHSVDSCPPALRAVFRSIQKNVERKFGADTIAKYTGVSGFFFLRFMGPAILNPKLFEMMPVHPEEHTSRTLTLLAKTLQNLANLVEFGAKEAYMTDMNEFIKANKEIMTRCIDRVATLPPGPVPLTLPPVDGARYAASIHRFLVQNEDALKHSEVLANHANAKRLLEHVDELRRSEQEGGKNKPPTEGFEAIVLYDYVGSQADELSVKEDDKIFVIAMNVEDAPGWCLASHAGKTGLVPQSYVEPRRHYATIPRLSVDASNDPNYAAIRPRTRSEIKPTVAARSPSITPGGSAASAIDHIYASIRNSGGEYDVVQPSSPKPLQQQQQPQKQELQSATADVHTPSSPATLSKRTSFGMQPQPVAPSESTTGTSHTGATPPSRPPQPKRTSISPTSTPTPGSPTPYHAAAAMAAGSATSTAPTPSSRPPSYALPARSGSLQRGGTLPATTEESPPSSASLQSPRAMLRSSRALPGQQSLGGSGSGSDDVPAWLKEHAARQNK* # PASA_UPDATE: g6466.t1, single gene model update, valid-1, status:[pasa:asmbl_2285,status:12],[pasa:asmbl_2292,status:12], valid-1 NODE_166_length_33803_cov_41.5531 . gene 12873 16201 . - . ID=g6466;Name=g6466.t1 NODE_166_length_33803_cov_41.5531 . mRNA 12873 16201 . - . ID=g6466.t1;Parent=g6466;Name=g6466.t1 NODE_166_length_33803_cov_41.5531 . five_prime_UTR 16168 16201 . - . ID=g6466.t1.utr5p1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 16144 16201 . - . ID=g6466.t1.exon1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 16144 16167 . - 0 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 15696 15762 . - . ID=g6466.t1.exon2;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 15696 15762 . - 0 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 15370 15548 . - . ID=g6466.t1.exon3;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 15370 15548 . - 2 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 14777 15182 . - . ID=g6466.t1.exon4;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 14777 15182 . - 0 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 14430 14513 . - . ID=g6466.t1.exon5;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 14430 14513 . - 2 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . exon 12873 14229 . - . ID=g6466.t1.exon6;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . CDS 13370 14229 . - 2 ID=cds.g6466.t1;Parent=g6466.t1 NODE_166_length_33803_cov_41.5531 . three_prime_UTR 12873 13369 . - . ID=g6466.t1.utr3p1;Parent=g6466.t1 #PROT g6466.t1 g6466 MMSTMRLMLRPAMYAVAFRRFGTTAVASGAANPSAAEVSRILEERILQTNTEATLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLRGMALNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEEVLGRVVDALGNPIDGKGPLNTKKRARVGLKAPGIIPRRSVHEPMQTGVKAVDSLVPIGRGQRELIIGDRQTGKTAVAVDAIINQKRFNDGTEEKKKLYCIYVAIGQKRSTVAQLVKTLSDADAMKYTVIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQIKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQELLNRGTRLTELLKQRQYTPMPVEEQVCVIYAGVRGFLDKVDPSKITKFEAAFLQHIRTQQQDILKEIREKAVISPELDKKMKTLLSTFMSTFQ* # PASA_UPDATE: g6467.t1, single gene model update, valid-1, status:[pasa:asmbl_2291,status:12], valid-1 NODE_166_length_33803_cov_41.5531 . gene 16883 18213 . + . ID=g6467;Name=g6467.t1 NODE_166_length_33803_cov_41.5531 . mRNA 16883 18213 . + . ID=g6467.t1;Parent=g6467;Name=g6467.t1 NODE_166_length_33803_cov_41.5531 . five_prime_UTR 16883 16939 . + . ID=g6467.t1.utr5p1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . exon 16883 17010 . + . ID=g6467.t1.exon1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . CDS 16940 17010 . + 0 ID=cds.g6467.t1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . exon 17180 17258 . + . ID=g6467.t1.exon2;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . CDS 17180 17258 . + 1 ID=cds.g6467.t1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . exon 17563 17769 . + . ID=g6467.t1.exon3;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . CDS 17563 17631 . + 0 ID=cds.g6467.t1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . exon 18032 18213 . + . ID=g6467.t1.exon4;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . three_prime_UTR 17632 17769 . + . ID=g6467.t1.utr3p1;Parent=g6467.t1 NODE_166_length_33803_cov_41.5531 . three_prime_UTR 18032 18213 . + . ID=g6467.t1.utr3p2;Parent=g6467.t1 #PROT g6467.t1 g6467 MSVIIPKKPVLNLLGLTATHVKSWGPSYAAWGGVAFGAFLFATNWSPIQQFVPFLGADARAYLEQKRKAAEK* # ORIGINAL: g6465.t1 original gene structure, not modified by PASA NODE_166_length_33803_cov_41.5531 AUGUSTUS gene 10070 12704 . + . ID=g6465;Name=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS mRNA 10070 12704 . + . ID=g6465.t1;Parent=g6465;Name=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 10070 10217 . + . ID=g6465.t1.exon1;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 10070 10217 . + 0 ID=cds.g6465.t1;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 10354 10436 . + . ID=g6465.t1.exon2;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 10354 10436 . + 2 ID=cds.g6465.t1;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 10633 12193 . + . ID=g6465.t1.exon3;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 10633 12193 . + 0 ID=cds.g6465.t1;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 12415 12486 . + . ID=g6465.t1.exon4;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 12415 12486 . + 2 ID=cds.g6465.t1;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 12628 12704 . + . ID=g6465.t1.exon5;Parent=g6465.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 12628 12704 . + 2 ID=cds.g6465.t1;Parent=g6465.t1 #PROT g6465.t1 g6465 MSDFFEEDDFVGGSRVDDVDVQGLIQAYQDACAQLAIKPWNKLLVQLQSALVASKVPEVIDLRDVKVDAKGLEALNEVVGRLHCVDILNLENASLDDTTVAAVCDMVQYHPKCSFHKINLSKNPRIWARGWKSVGEMLTNTTSIRSLLISGTGGITGVDTGSFKVIAEAAIASHSLRELALEDTGLNGQTLVAVVEVLRQHKTLEILRLGDNRIRTADIKAIAPLLGNCTTLTTLDLRHNPLGDAGVSLLCEILSGEYAQQQQQQNSNPPSRSNSAEALPASQTPSISSNAASIMDLVLWGVEFRVDGARALASHIAMPGAVIRTLNIGRNDIGDAGIEALSAGLLRNKSLKKIGLVFTGIKSEGAISLAEAMAHNATLARIDLRENDVGLAGLLALSASMKMNRTVMRLDLSPDPRLTAVEASTEGSILSDIESYSQRNLLQRTALKRASDLGLHMPHTQRGEADRPWERPRMSTGVAKFKIDDDEEEEGARGSAASTSATGASRRSGSVGGNASAKSTPALASSPTVPAGAASQGIVADVRGSSVGGSSASSLGAKLSLSSTPVASAQQPAQTAPATTGPNKSSVNIKGLTTIVKDLADWEKELEDDMDDLGIGTGATGASAGGGDGLLAWNDDEDEDGEIDLL* # ORIGINAL: g6464.t1 original gene structure, not modified by PASA NODE_166_length_33803_cov_41.5531 AUGUSTUS gene 7497 9140 . + . ID=g6464;Name=g6464.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS mRNA 7497 9140 . + . ID=g6464.t1;Parent=g6464;Name=g6464.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 7497 9140 . + . ID=g6464.t1.exon1;Parent=g6464.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 7497 9140 . + 0 ID=cds.g6464.t1;Parent=g6464.t1 #PROT g6464.t1 g6464 MAAENGRSTAGGPSVEPWRSKSAALRASIANSAPAHTASSTTKRVQPSADRGNGRPLPVGSGTCFRFERSGSCKFGSECHFVHTITKAGPRNHRAVNSDRNAEDALSGRFRDVLRMEHDSSTQHGAFNTGSAYAPSHSSTICSKPVTKLYVDALNYSEFFMETEWSINRAKIAIQSFVAGARNAGISLLKVFIDVAMDTSETEEKWRNRREKEVVSGKKRMMHGMSTIMGDLFRREGVDVCYSLDADNDDTLAAHAHADGADILSRDKDYFRYTGATYRVFSDFDRSSLYSSKRLELIAHPQQFAQRSSPRDLLLSPLPAYQAIPVATKGTDALQMDATFVPVLIKRRLYRRGAPSPLVRALELNPHERVRPLRRALYALLFPVVPPCAKPATEYTPDNAAPSTCTSNANGGGVRDDKEASSVSNICEDVVIREIIPLWDSVTNRVKWLCDDVTPLRVRDTRASDAQEQRDGAVDECAQKWTAVLAGSPRAAFETLFPAESNASASAAPRSVSAKDWKKHCMACRSVVYELFAAATRQELLGLLLGP* # ORIGINAL: g6469.t1 original gene structure, not modified by PASA NODE_166_length_33803_cov_41.5531 AUGUSTUS gene 23897 33252 . + . ID=g6469;Name=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS mRNA 23897 33252 . + . ID=g6469.t1;Parent=g6469;Name=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 23897 24003 . + . ID=g6469.t1.exon1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 23897 24003 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 24266 24423 . + . ID=g6469.t1.exon2;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 24266 24423 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 24628 24695 . + . ID=g6469.t1.exon3;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 24628 24695 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 24962 25028 . + . ID=g6469.t1.exon4;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 24962 25028 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 25416 25556 . + . ID=g6469.t1.exon5;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 25416 25556 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 25919 26053 . + . ID=g6469.t1.exon6;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 25919 26053 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 26269 26409 . + . ID=g6469.t1.exon7;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 26269 26409 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 26921 27070 . + . ID=g6469.t1.exon8;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 26921 27070 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 27305 27379 . + . ID=g6469.t1.exon9;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 27305 27379 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 27640 27781 . + . ID=g6469.t1.exon10;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 27640 27781 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 28019 28210 . + . ID=g6469.t1.exon11;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 28019 28210 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 28399 28500 . + . ID=g6469.t1.exon12;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 28399 28500 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 28768 28828 . + . ID=g6469.t1.exon13;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 28768 28828 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 29123 29279 . + . ID=g6469.t1.exon14;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 29123 29279 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 29556 29678 . + . ID=g6469.t1.exon15;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 29556 29678 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 29958 30097 . + . ID=g6469.t1.exon16;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 29958 30097 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 30310 30430 . + . ID=g6469.t1.exon17;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 30310 30430 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 30767 30856 . + . ID=g6469.t1.exon18;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 30767 30856 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 31152 31260 . + . ID=g6469.t1.exon19;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 31152 31260 . + 2 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 31566 31695 . + . ID=g6469.t1.exon20;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 31566 31695 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 31925 32014 . + . ID=g6469.t1.exon21;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 31925 32014 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 32337 32513 . + . ID=g6469.t1.exon22;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 32337 32513 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 32761 32900 . + . ID=g6469.t1.exon23;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 32761 32900 . + 0 ID=cds.g6469.t1;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS exon 33159 33252 . + . ID=g6469.t1.exon24;Parent=g6469.t1 NODE_166_length_33803_cov_41.5531 AUGUSTUS CDS 33159 33252 . + 1 ID=cds.g6469.t1;Parent=g6469.t1 #PROT g6469.t1 g6469 MPLISGKSKSVPSLRLGSKAAMSSSSLTASPREAPSSSALAGGSEPRSGSALLQPLLDRLADDLATRDPDVDTMRRTVSRIQALIHTHEKCRKEIKSKKSNGISLLLQALEATADITISESIVTILSGIVSLGSKSALSLVNRGTVPALLRVLSSTQKTGIRSDQFAALLIGTLYELGDHDKKIGVGARLSGALAALIAIVKQNSGVSKIMVPALKLLTLVCNNSPTNIAVVGKSGGIAAVVGVFSTNRDPVSRDSSISKLALSLIVTLSCSKTNAAQLVEKDSVRLLLDAFRDLGIKPDKKKKINDARKSVLLGLKRLVSSPKGRKAFLESGGVDELYAFAKQVAELPESESLLTSIGALLRKCHPRESLPIPTDFATHTVPRDDGAVADDILGLDYWERFFPELGDDPRPPALSVQGRRPPVPALCRSFLTAGASVESILQPPFPEPFYSRPAKLQRSLVFADIGRAMATDVAPWIVYDDCTGPIPVDPKGDPCLIFESRFESGNLRRALKVSEFEYDLVLNTDINSPRHVQWFYFGVKGMKGRHTYKFNIVNCEKPNSQFNFGMQPVMQSSEDLRMKGGGWKRVGHDICYYKNHFTRASASQGAGDANDSDGGKGIEAAYYTLTFSIEFPYEEDTCHIAYHFPYTYSALQRDLDIARESPLGRTRMYRQTLCETIGMNKCDVITITSYDKGSIYPLSQRPYIFLSGRVHPGESNASWIMKGIIDFLLDDTPAARSLCDTFVFKIVPMLNPDGVINGNHRCSLSGQDLNRQWSTPSPVIHPTIFHTKRLLQFLVSRSRKPLVYCDLHGHSRKKNIFMYGCNDANAEYAFEQTFPRILEECSPYFSFASCRFNVDKSKESTARVVVWRELGILRSYTLESSYCGADKGQLKGIHFTTANLEEMGRHFCTGLLSLIDPEITERINGTLRQVPVSVSSSSADDSDSEEEEANRIAGVVISSGDEDPESPE* # PASA_UPDATE: g6437.t1, single gene model update, valid-1, status:[pasa:asmbl_3727,status:3], valid-1 NODE_2193_length_7326_cov_40.0157 . gene 1649 3814 . + . ID=g6437;Name=g6437.t1 NODE_2193_length_7326_cov_40.0157 . mRNA 1649 3814 . + . ID=g6437.t1;Parent=g6437;Name=g6437.t1 NODE_2193_length_7326_cov_40.0157 . five_prime_UTR 1649 1697 . + . ID=g6437.t1.utr5p1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . exon 1649 1712 . + . ID=g6437.t1.exon1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . CDS 1698 1712 . + 0 ID=cds.g6437.t1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . exon 2001 2195 . + . ID=g6437.t1.exon2;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . CDS 2001 2195 . + 0 ID=cds.g6437.t1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . exon 2613 2699 . + . ID=g6437.t1.exon3;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . CDS 2613 2699 . + 0 ID=cds.g6437.t1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . exon 3149 3814 . + . ID=g6437.t1.exon4;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . CDS 3149 3682 . + 0 ID=cds.g6437.t1;Parent=g6437.t1 NODE_2193_length_7326_cov_40.0157 . three_prime_UTR 3683 3814 . + . ID=g6437.t1.utr3p1;Parent=g6437.t1 #PROT g6437.t1 g6437 MADTHEYSEDLSYEERAALRAQRRSSRSQSIADDTAPAAEVAHPAEVEKVAAAASKPAPMSPKPERHAKKEDDHGLKEQLEKANHTITSLKKEVDDLKKLLRQKDDEISHLKSAAHAEKHAHADSHAHAHTHAHEHKQEHKQEHKPAPAAAPAASTSSPPSSAAPERRPAGEARARPVSVFVGGAAAGDNKCTVCEKTVYPMERISADEKVFHKTCFKCSECQKTLSLGNYSAIGGVYYCKPHFKQLFKLKGNYDEGFGREQHKKKWIAGQDGEEK* # ORIGINAL: g6438.t1 original gene structure, not modified by PASA NODE_2193_length_7326_cov_40.0157 AUGUSTUS gene 4258 6821 . + . ID=g6438;Name=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS mRNA 4258 6821 . + . ID=g6438.t1;Parent=g6438;Name=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 4258 4420 . + . ID=g6438.t1.exon1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 4258 4420 . + 0 ID=cds.g6438.t1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 4757 4854 . + . ID=g6438.t1.exon2;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 4757 4854 . + 2 ID=cds.g6438.t1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 5091 5190 . + . ID=g6438.t1.exon3;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 5091 5190 . + 0 ID=cds.g6438.t1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 6123 6176 . + . ID=g6438.t1.exon4;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 6123 6176 . + 2 ID=cds.g6438.t1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 6387 6491 . + . ID=g6438.t1.exon5;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 6387 6491 . + 2 ID=cds.g6438.t1;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS exon 6709 6821 . + . ID=g6438.t1.exon6;Parent=g6438.t1 NODE_2193_length_7326_cov_40.0157 AUGUSTUS CDS 6709 6821 . + 2 ID=cds.g6438.t1;Parent=g6438.t1 #PROT g6438.t1 g6438 MAARRSIFAGCVACIFAMAALVASVEALDATMCSACEAVVYELQRSLRKEKLIPDFEVGHRLNPDGSYQARTVDYKNSELRVIEIMEGLCANMKDYTLVTKNGVGKWTKTSNTDGPISIDGSIGGLGAGDASKQLRYTCDRLLEEYEEDLSSAIRKGADVKRVLCNRLTKYCRAEKKTKAPTATSNTNNDINKDAAATTKPTDSVTHDEM* # ORIGINAL: g9974.t1 original gene structure, not modified by PASA NODE_800_length_17585_cov_41.2785 AUGUSTUS gene 356 1432 . + . ID=g9974;Name=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS mRNA 356 1432 . + . ID=g9974.t1;Parent=g9974;Name=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 356 438 . + . ID=g9974.t1.exon1;Parent=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 356 438 . + 0 ID=cds.g9974.t1;Parent=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 670 788 . + . ID=g9974.t1.exon2;Parent=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 670 788 . + 1 ID=cds.g9974.t1;Parent=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 975 1432 . + . ID=g9974.t1.exon3;Parent=g9974.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 975 1432 . + 2 ID=cds.g9974.t1;Parent=g9974.t1 #PROT g9974.t1 g9974 ILEQGHSRIPVYDKLPSNIIGILLVKSLIMINPSASTPIRRILLRQVMEFSPVTPLYDILHAFQSGKGHMGIIKQGKAVVGLVTLEDVIGQLVQSEDGIDIRWGADGEAVAVLDYSRPGTPTLMRPRVSGSPSLISIGQTGTVSPGSGNQRTTSPQQQQQPQQQQQQQLHQQHSGASRGFVPINGHIRLSTRRSMSADEDDTVGERRPLLGASNDHTIN* # ORIGINAL: g9975.t1 original gene structure, not modified by PASA NODE_800_length_17585_cov_41.2785 AUGUSTUS gene 2011 5182 . - . ID=g9975;Name=g9975.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS mRNA 2011 5182 . - . ID=g9975.t1;Parent=g9975;Name=g9975.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 2569 5182 . - . ID=g9975.t1.exon1;Parent=g9975.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 2569 5182 . - 0 ID=cds.g9975.t1;Parent=g9975.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 2011 2300 . - . ID=g9975.t1.exon2;Parent=g9975.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 2011 2300 . - 2 ID=cds.g9975.t1;Parent=g9975.t1 #PROT g9975.t1 g9975 MDRILIGVLSSTHPDDLKRQLVTHLCASISSADAPSVLACADVWLGDSASSLSRELGGIVAGAVARTHIDALSSHLNAEWARNALSPLTDNNTLRVDAIASSHPTAATTPTAATTAVSLSATCAMERVACMLRLLRINQKTRNLTLLPCISAIKDALTTALAVDRPWPILSQCALSRLIASVPDAAPDNFAIHAVQWVAQRPSTPSAVQAHATATDLHTNALLLVWHARPELLRPSLDVLLQYILNPHTLPLSTLATLMANVPPEAVTSTASAAVARGFLPDDALSLLLARAAAWVALPSPKTSARVAHWVYALFEAAVVERRFTVAFLSSVGIVRRCLAVAANAQSINGEHGEHGMPPSSGSSAAVLSCMLLLCYQHAPESFHGAIPMLSRAISVRLGDQPVTETDVLSALQAVHSCSGDPWTPLAHSTPSESLRLSRAYLIVSAVACQFMYPGHAAMYATLPRIPSTATSILPDGTHSLLGNAIESHVLVHGLSNTGSRRVPPGLVNTGNTCYMNALLQALRASVPFRRRLLSHDARASHSETLLFQTAMSRLCFSIRPAVYPGDLESQGQPKWFARGSQQDAAELFRYIFDRIDTECSAVSHASSEKEGASENRGSSENKGERRDITGPNSVFRGEITHLITCRNCHAQSRTREPFHDVALGLGDSSSPVCSLADALRSHFSTEDVDGNVGYACESCGRPDAPATRTVSLSVAPECLVLTLKRFAYDNAGGRRKLTHSVHCNDSIRLGVISPADCTQMQTEYIGGGGSNEADGKSFDNDTGDLLHHGRILAESTVGGTAVHYSLFAVVVHVGTSLECGHYTCHARCDDGRWRHFDDTSVGSSSLDAALDATAVRSSFDSPYMLFYRLAGNNSTAIVLGCSTTSVSEWDDSCPWQLSDSARREISAVYADNGMHLTELEMGGESLLPANGGRLTPPSSDGGDRSRDAAPSDGCGDSGFSTGRYVM* # ORIGINAL: g9978.t1 original gene structure, not modified by PASA NODE_800_length_17585_cov_41.2785 AUGUSTUS gene 14635 17295 . + . ID=g9978;Name=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS mRNA 14635 17295 . + . ID=g9978.t1;Parent=g9978;Name=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 14635 14707 . + . ID=g9978.t1.exon1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 14635 14707 . + 0 ID=cds.g9978.t1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 14988 15326 . + . ID=g9978.t1.exon2;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 14988 15326 . + 2 ID=cds.g9978.t1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 15469 15579 . + . ID=g9978.t1.exon3;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 15469 15579 . + 2 ID=cds.g9978.t1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 16164 16217 . + . ID=g9978.t1.exon4;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 16164 16217 . + 2 ID=cds.g9978.t1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 16416 16573 . + . ID=g9978.t1.exon5;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 16416 16573 . + 2 ID=cds.g9978.t1;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 17055 17295 . + . ID=g9978.t1.exon6;Parent=g9978.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 17055 17295 . + 0 ID=cds.g9978.t1;Parent=g9978.t1 #PROT g9978.t1 g9978 MFGGGGANGGFGAQPAAGGFGGAGGFGAGAGGFGAAPAATGFGAGVGGVGGFGGQPAATGFGAAPGGFGAPAAGGFGGGAGFGAPAAAQTGFGAVGGMGGMGGGIGGGMGGLGLGGQGTAAMGGFTQPAMGGFGGGGLGSSFSNPTTGYGAGASTSGFGTALTKPAFGTTTGFGAGGFGAGFGGGAAGFGAAGGAGFGAPKLGTKNVKYQRFSMQEPGTKTGDQPVTVYFETICAVQDCANKSFEELRYEDYQQGTKGGTGNVGMGGGFGGQTQMGGAGAGGAFGTPMFGGQQQQQQQPGAFGAMGGGGAGGFGGAAGGFGGAAG # PASA_UPDATE: g9977.t1, single gene model update, valid-1, status:[pasa:asmbl_9468,status:12], valid-1 NODE_800_length_17585_cov_41.2785 . gene 11593 13470 . + . ID=g9977;Name=g9977.t1 NODE_800_length_17585_cov_41.2785 . mRNA 11593 13470 . + . ID=g9977.t1;Parent=g9977;Name=g9977.t1 NODE_800_length_17585_cov_41.2785 . five_prime_UTR 11593 11663 . + . ID=g9977.t1.utr5p1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . exon 11593 11816 . + . ID=g9977.t1.exon1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . CDS 11664 11816 . + 0 ID=cds.g9977.t1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . exon 12025 12075 . + . ID=g9977.t1.exon2;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . CDS 12025 12075 . + 0 ID=cds.g9977.t1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . exon 12190 12529 . + . ID=g9977.t1.exon3;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . CDS 12190 12529 . + 0 ID=cds.g9977.t1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . exon 12730 12936 . + . ID=g9977.t1.exon4;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . CDS 12730 12936 . + 2 ID=cds.g9977.t1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . exon 13061 13470 . + . ID=g9977.t1.exon5;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . CDS 13061 13275 . + 2 ID=cds.g9977.t1;Parent=g9977.t1 NODE_800_length_17585_cov_41.2785 . three_prime_UTR 13276 13470 . + . ID=g9977.t1.utr3p1;Parent=g9977.t1 #PROT g9977.t1 g9977 MPMPSHCRVAVTAILITSLAAAVLGDSYPDESFCAPKAGPKSGGDNWVYNYCRRPSQDRDTASAGWSPVYFTGLTHTQNLGDRVLYNGYWSGTHTDTLRMEALQLDWAVAPQWSGIINDMTIEVTCHIQNIGDVTVGAGQLCGTRGQGRRLEGFQIRLRGRHARKFAIDIVCKDQQGAMMTKYGFYEDEVPTGSNFCGSRGRGVALAAVKIFIYPINLPFQPLFSRGMTADARILDSNTFLWTYYRDRNPDLGNLGVTNEVAYRNHFINIGIYDKRASHPTYNVGAYLAKNPAINTEFVSDPVSATLHYIYTGRAAGLTAV* # ORIGINAL: g9976.t1 original gene structure, not modified by PASA NODE_800_length_17585_cov_41.2785 AUGUSTUS gene 6043 9666 . - . ID=g9976;Name=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS mRNA 6043 9666 . - . ID=g9976.t1;Parent=g9976;Name=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 9573 9666 . - . ID=g9976.t1.exon1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 9573 9666 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 9206 9339 . - . ID=g9976.t1.exon2;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 9206 9339 . - 2 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 8842 8991 . - . ID=g9976.t1.exon3;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 8842 8991 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 8495 8565 . - . ID=g9976.t1.exon4;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 8495 8565 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 8123 8246 . - . ID=g9976.t1.exon5;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 8123 8246 . - 1 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 7364 7687 . - . ID=g9976.t1.exon6;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 7364 7687 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 7160 7190 . - . ID=g9976.t1.exon7;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 7160 7190 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 6866 6957 . - . ID=g9976.t1.exon8;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 6866 6957 . - 2 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 6610 6695 . - . ID=g9976.t1.exon9;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 6610 6695 . - 0 ID=cds.g9976.t1;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS exon 6043 6313 . - . ID=g9976.t1.exon10;Parent=g9976.t1 NODE_800_length_17585_cov_41.2785 AUGUSTUS CDS 6043 6313 . - 1 ID=cds.g9976.t1;Parent=g9976.t1 #PROT g9976.t1 g9976 MADHKKDKTAQALQDLLALEENKFCADCPTRGPRWASWNLGVFLCMRCAGLHRNLGAHITKIKSISLDQWKPEQVEFMRTMGNRRSNELYMALADQSFQQPTDQDDFIRRKYQRKEWFAPPEVAATHRQVSAVPGSVEQKYAHQITQLNGMGFTNMAVNIDALTKAKGDVNVAIEDLIVRTSGGSPQPHQEPVAPPVDRVLQGKLDTLVSMGFTNMNLNRSALQKFNGDLNLALEEIIARGDDSPLPPSIPGPPRADPWLGTAQGTSSPDRSTAVAPAAAPRGNIANTIASDDLLGGYSPSASSNATHAAPPIKSKQDILSLYETPSGAAQPYNGNPFSQPLAAPTPIGHAISVVPIYGTAGTIPYGYGAQPNAYAAPPATGVNPFLTPGAPVTGPNPFHSPSLQRAQWGTPSPQQQQPQQQHASGDLSDPFAGLSLNSRGGVSSSQGGQSGASAPSW* # PASA_UPDATE: g6912.t1, single gene model update, valid-1, status:[pasa:asmbl_7117,status:12], valid-1 NODE_4226_length_1984_cov_41.9639 . gene 95 1916 . - . ID=g6912;Name=g6912.t1 NODE_4226_length_1984_cov_41.9639 . mRNA 95 1916 . - . ID=g6912.t1;Parent=g6912;Name=g6912.t1 NODE_4226_length_1984_cov_41.9639 . five_prime_UTR 1834 1916 . - . ID=g6912.t1.utr5p1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . exon 1755 1916 . - . ID=g6912.t1.exon1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . CDS 1755 1833 . - 0 ID=cds.g6912.t1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . exon 1318 1478 . - . ID=g6912.t1.exon2;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . CDS 1318 1478 . - 2 ID=cds.g6912.t1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . exon 902 979 . - . ID=g6912.t1.exon3;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . CDS 902 979 . - 0 ID=cds.g6912.t1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . exon 514 677 . - . ID=g6912.t1.exon4;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . CDS 514 677 . - 0 ID=cds.g6912.t1;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . exon 95 290 . - . ID=g6912.t1.exon5;Parent=g6912.t1 NODE_4226_length_1984_cov_41.9639 . CDS 95 290 . - 1 ID=cds.g6912.t1;Parent=g6912.t1;3_prime_partial=true #PROT g6912.t1 g6912 MVASRINLRNYIEYGVWVTGTDAEHNAFEWPIQDEEYVFDVLNKYTNKYPDCYVEFRKRLWISESEWRMGGGVADIFYYQILKAYREGKHRCPVDEAVTLAVLQHKVDTNCDSDKALCVCGKPGLKTCGGCKISSYCSRECQQGHWKDHSALCIRLQSEGKRSRFEGYFPKDLWDSKTAAQWDKLVKDNMKSIEAKSGDEARRFFLDRVMKWPSVASSFYDIKDFT # PASA_UPDATE: g7325.t1, single gene model update, valid-1, status:[pasa:asmbl_1331,status:12],[pasa:asmbl_1333,status:13], valid-1 NODE_1362_length_11754_cov_56.0221 . gene 6050 10222 . - . ID=g7325;Name=g7325.t1 NODE_1362_length_11754_cov_56.0221 . mRNA 6050 10222 . - . ID=g7325.t1;Parent=g7325;Name=g7325.t1 NODE_1362_length_11754_cov_56.0221 . exon 9920 10222 . - . ID=g7325.t1.exon1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . CDS 9920 10222 . - 0 ID=cds.g7325.t1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . exon 9466 9738 . - . ID=g7325.t1.exon2;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . CDS 9466 9738 . - 0 ID=cds.g7325.t1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . exon 8783 9104 . - . ID=g7325.t1.exon3;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . CDS 8783 9104 . - 0 ID=cds.g7325.t1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . exon 8065 8242 . - . ID=g7325.t1.exon4;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . CDS 8065 8242 . - 2 ID=cds.g7325.t1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . exon 6050 7804 . - . ID=g7325.t1.exon5;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . CDS 6715 7804 . - 1 ID=cds.g7325.t1;Parent=g7325.t1 NODE_1362_length_11754_cov_56.0221 . three_prime_UTR 6050 6714 . - . ID=g7325.t1.utr3p1;Parent=g7325.t1 #PROT g7325.t1 g7325 MLATAGSPKLDAAAKQTPSARGSISEKGAPSSTKESTNKEEKGASSARGSMDASAVQSAVAAGKAAEVEEEFVGKYKVGRTLGEGTYGKVKLGVHIHTNEKVAIKTMLKKSIKSDKQMVRIKREIRALSLLHHPGIIEVYDVIETDEKFIIVMELASGGELFDYIVSHRRVKEKEARKFFRQIVSAIDYCHKNSIVHRDLKPENLLLDKDKNIKIIDFGFSNMFQHESFLDTFCGSPFYAAPEMVRGRKYYGPEVDVWSLGVILYALLCGCLPFDDPNVKILYDQIASGMYRVPSHLSKDSKSLIRRMLTVDPKERASMEEVRTHKWMSDGFDGAEGSHVPIRRPIGGNPDDEIVDRLRNYGYSQDDINAALSKTAEGGNPITCLYHLLVEKRERDHKRMLAERQAAAAVAGLRAGDAARPASHSGSMTLFPIQEDGSPTKGISPAASSTALQPTSGTTAGHLNVKRRATVAGDVTSGVSAQTIAAPLRETQQQHQQAQLSSVSPRTRARAGSDASSFRPMSMGALGGGGDSLGADAGYERPASWGPSGSAAARAAADAAIAGGGSASGGAGPSASEGADKGGQSAHPGARRRFSLDTAFNPFKLFQRTGSRKGSYEADGINGIRTIGGWFNVSTTSSKTPEDIMTEVRRVLTEAGITYEVTGFVITCEEKDSTRSRPARFEFEVCRIPRLSLYGLHTKRLAGDLWHHKKLVDKLIEKMRL* # PASA_UPDATE: g7323.t1, single gene model update, valid-1, status:[pasa:asmbl_1334,status:12], valid-1 NODE_1362_length_11754_cov_56.0221 . gene 86 1957 . + . ID=g7323;Name=g7323.t1 NODE_1362_length_11754_cov_56.0221 . mRNA 86 1957 . + . ID=g7323.t1;Parent=g7323;Name=g7323.t1 NODE_1362_length_11754_cov_56.0221 . five_prime_UTR 86 142 . + . ID=g7323.t1.utr5p1;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . exon 86 555 . + . ID=g7323.t1.exon1;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . CDS 143 555 . + 0 ID=cds.g7323.t1;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . exon 696 885 . + . ID=g7323.t1.exon2;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . CDS 696 885 . + 1 ID=cds.g7323.t1;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . exon 1007 1957 . + . ID=g7323.t1.exon3;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . CDS 1007 1876 . + 0 ID=cds.g7323.t1;Parent=g7323.t1 NODE_1362_length_11754_cov_56.0221 . three_prime_UTR 1877 1957 . + . ID=g7323.t1.utr3p1;Parent=g7323.t1 #PROT g7323.t1 g7323 MAPVVFVRWPSSAVPPGLAHSFLALHARTAAVSRAVASSSSHVAPYNHTIPTQSRESIRPRFSTASVNCIYFGGHTANADASDLRSLIRTIRTLLFQTKDEYESEVSFEISPAEMSLATSESEWFNRLALLRDAGVTRVIFEKSIVASALRLPSDGHRLSLHKLPPPNQPFPGAFPSLRAIEVAQALFPGSVAAHTVVSDDSVVSCAIAANSPIIPLVDHWTVDGDTAGAAESLIRNGFIRYEKCNFARRSTTHPEGRRSIYMTSLWRRDTVVGLGPGSHSHLLHLGRSRSLSTNEDTKSSLKLSNTGRHRTIYTSDTRACADVACTEVTAKYWRETVASTLTAPLSAHQWIGWLLQQRRPAGLPSSPVCLRSVPLCYRRSGWRRRPHSFLRCNHVTRFEALQQLVLFSLRTDGGLRACQWMRFEPSLVLFRRLCASAGVAELVAGGFICVVGAPDTPTAIVSSRSGVDVSDAVAVNLLAAMDDSLGTPK* # PASA_UPDATE: g7324.t1, single gene model update, valid-1, status:[pasa:asmbl_1332,status:13],[pasa:asmbl_1335,status:12], valid-1 NODE_1362_length_11754_cov_56.0221 . gene 2427 5786 . + . ID=g7324;Name=g7324.t1 NODE_1362_length_11754_cov_56.0221 . mRNA 2427 5786 . + . ID=g7324.t1;Parent=g7324;Name=g7324.t1 NODE_1362_length_11754_cov_56.0221 . five_prime_UTR 2427 2563 . + . ID=g7324.t1.utr5p1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 2427 2728 . + . ID=g7324.t1.exon1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 2564 2728 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 2895 2935 . + . ID=g7324.t1.exon2;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 2895 2935 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 3063 3234 . + . ID=g7324.t1.exon3;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 3063 3234 . + 1 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 3684 3738 . + . ID=g7324.t1.exon4;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 3684 3738 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 3914 3957 . + . ID=g7324.t1.exon5;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 3914 3957 . + 2 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 4178 4285 . + . ID=g7324.t1.exon6;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 4178 4285 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 4539 4682 . + . ID=g7324.t1.exon7;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 4539 4682 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 4891 4933 . + . ID=g7324.t1.exon8;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 4891 4933 . + 0 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . exon 5048 5786 . + . ID=g7324.t1.exon9;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . CDS 5048 5244 . + 2 ID=cds.g7324.t1;Parent=g7324.t1 NODE_1362_length_11754_cov_56.0221 . three_prime_UTR 5245 5786 . + . ID=g7324.t1.utr3p1;Parent=g7324.t1 #PROT g7324.t1 g7324 MCRFVLYMGKQPILIADLLLKPTHSIIKQSFSCKLRMDHNPLNGDGFGVGWYDTKVDPSPCVFTSVLPAWNNLNLKRISEKIQSKLVFAHVRAATLGLPISESNCHPWSYGPFMWMHNGTIAQFNKIKRRLQQSLRDTLFDMLQGTTDSENIFALFLNQFPDPLNGSYSFDEIREAMLTTIHLINLWSEEAGIEEPATMNFAVADGRCVVASRYVNKPHAEPVSLYFSSGTNFECDDSGNYRMFKSDRREHVVIVASEPLTFEKQDWLPVPSNHLLVISPRLNVLLFPIMEKPVAKALHEEVTPLHPTPLPIAGNAVRMQCA* # ORIGINAL: g8551.t1 original gene structure, not modified by PASA NODE_2202_length_7293_cov_40.0158 AUGUSTUS gene 3684 6817 . + . ID=g8551;Name=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS mRNA 3684 6817 . + . ID=g8551.t1;Parent=g8551;Name=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS exon 3684 3741 . + . ID=g8551.t1.exon1;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS CDS 3684 3741 . + 0 ID=cds.g8551.t1;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS exon 4436 5466 . + . ID=g8551.t1.exon2;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS CDS 4436 5466 . + 2 ID=cds.g8551.t1;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS exon 5711 6026 . + . ID=g8551.t1.exon3;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS CDS 5711 6026 . + 0 ID=cds.g8551.t1;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS exon 6378 6817 . + . ID=g8551.t1.exon4;Parent=g8551.t1 NODE_2202_length_7293_cov_40.0158 AUGUSTUS CDS 6378 6817 . + 2 ID=cds.g8551.t1;Parent=g8551.t1 #PROT g8551.t1 g8551 MADVRHNSGAVSSAEYRRPTFNILQINQEGPAVFRLAASPDGKINVIGGCDSQQTCQLARLVLPGDVAKAPDAPSLVTLEAGLDDSFTLTEYDFVVDNDGNLAMVYVLDHNTDPPTNEARGFMVAYFSVAALDAAAASRTKLMFGSTTVLQACDQSANLRFLHVSQLFALGTRGNHLLVTGYCSPAFPVDPLVDRPYVAAVPLAQFASSSPPSSPLIVTADVSALTNIIAQLSDSIVANYEPAIDCALYNEATSSVVCGIIFSLSQPYLDPSVVVTLPLFFVTIIAGPADAEPPIVALSSAGSSSETAWTSTAVVYFQGADDAAGVRGTVMVAHIHENALVLRAFSSSGVVSPPAQVTSTSTPPASPALRCGVDGKTIFATALWSVTKGDSLWQGQLKATSFNVTGTPLSLPPLSEWKAMNANFYISDDPSTKKRPSHHLGRPIATATVNDTIIAIDAGTAAQLANVKGACSNNNQGEEKLQQWMCTFAPADNTDKIVNPGENDEVFSLAEIQNVWGTVSVTRSGIKNVTLPTGKISGALIIKDNDFLDKILIVGEDVSVGGGGEIKGNKYLCPDSSLLEMLADEKLSQRTVKVTPGDNCSKSVVLASVFTVDE* # PASA_UPDATE: g8550.t1, single gene model update, valid-1, status:[pasa:asmbl_3751,status:12], valid-1 NODE_2202_length_7293_cov_40.0158 . gene 247 2849 . - . ID=g8550;Name=g8550.t1 NODE_2202_length_7293_cov_40.0158 . mRNA 247 2849 . - . ID=g8550.t1;Parent=g8550;Name=g8550.t1 NODE_2202_length_7293_cov_40.0158 . five_prime_UTR 2691 2849 . - . ID=g8550.t1.utr5p1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . exon 2495 2849 . - . ID=g8550.t1.exon1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . CDS 2495 2690 . - 0 ID=cds.g8550.t1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . exon 2211 2267 . - . ID=g8550.t1.exon2;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . CDS 2211 2267 . - 2 ID=cds.g8550.t1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . exon 1618 1688 . - . ID=g8550.t1.exon3;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . CDS 1618 1688 . - 2 ID=cds.g8550.t1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . exon 824 1124 . - . ID=g8550.t1.exon4;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . CDS 824 1124 . - 0 ID=cds.g8550.t1;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . exon 247 333 . - . ID=g8550.t1.exon5;Parent=g8550.t1 NODE_2202_length_7293_cov_40.0158 . CDS 247 333 . - 2 ID=cds.g8550.t1;Parent=g8550.t1;3_prime_partial=true #PROT g8550.t1 g8550 MNFRDFPPLRYYWRNSRKLSRRMPTLPKLYISAAVTDCQCRLWSCQCILLVLALVCSPVLPIVGAADSSTCSTCNTTGDASAQLEAFSQAGDAWAGYYDCNLLGFVATSLVVTSRDNHSVNGTGEWKAFGCVVQFTYTVSVAAQGSGLGLQLAMLTSPVNNCNVPLFVGVGRLCARGGPTDDAPRLCGTLFVNGYCDSYQYGIAPVAGDSASVSPTSLPSPTNSATDVPVSDQDDTD # ORIGINAL: g14215.t1 original gene structure, not modified by PASA NODE_743_length_18227_cov_54.4351 AUGUSTUS gene 4259 5888 . + . ID=g14215;Name=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS mRNA 4259 5888 . + . ID=g14215.t1;Parent=g14215;Name=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 4259 4622 . + . ID=g14215.t1.exon1;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 4259 4622 . + 0 ID=cds.g14215.t1;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 4772 4929 . + . ID=g14215.t1.exon2;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 4772 4929 . + 2 ID=cds.g14215.t1;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 5116 5546 . + . ID=g14215.t1.exon3;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 5116 5546 . + 0 ID=cds.g14215.t1;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 5672 5888 . + . ID=g14215.t1.exon4;Parent=g14215.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 5672 5888 . + 1 ID=cds.g14215.t1;Parent=g14215.t1 #PROT g14215.t1 g14215 MSEDAAMVLPPPKEARVRPPPPEYVPMEGIEGFIQSTEKLAKRLVIYFNDKEKFALCRGLGENFKLVSLGLGVFAFKGLASKDALQNVLSNELVGRYVSRVYWTDGGVSTRRDAIVVKVVELLADQPDVKLRLQTFPSSNAQVFADMIPENIALQKSGFTHILSLVFINKRGSKLYYWGLTPASERYHQNTDARPDTDVCSARFKLCETFFVFGIKPAPTWRFLDVGAAPGSWTSVLKTLVPEGIVVAVDPAELNDDCLSASNVVHLRKKVEDCEAELRRYAPFDAVTCDANVDPRQVRRACMHEGGGGTTACVFKWKHLSNALSIALELLRPGGLFILTLKCFDKFRQTETVKGTRAIYADALARVQVVWLLANTTNEQTLVGWKKSE* # ORIGINAL: g14220.t1 original gene structure, not modified by PASA NODE_743_length_18227_cov_54.4351 AUGUSTUS gene 14006 16660 . - . ID=g14220;Name=g14220.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS mRNA 14006 16660 . - . ID=g14220.t1;Parent=g14220;Name=g14220.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 14006 16660 . - . ID=g14220.t1.exon1;Parent=g14220.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 14006 16660 . - 0 ID=cds.g14220.t1;Parent=g14220.t1 #PROT g14220.t1 g14220 MGQGRARGNGAPSRPKETGDRLADIIASLTSSGETTLNATELKELKNLCRASDAELRKAFFLLMARIQEPHSQVRLSGVLIIGELFVRSHLFRQLLVDEFQQLIQLCVGREPDHPLPKPQRAAEMLRDVAVRAIAEWHAKYGQHYRKLAIGYDFLRDFYCVDFETLKVRDRIQQQREAEYAAKRLKAMQQRWDALSSELEDVALEVEKTLAEINEGLSLLLPPTFEDVCAEVENDGNHNGSSSSHVGAIASNISEELSSNGTDAFVRARSAHCDGALSDCSEDQDMQSSGDDEGDGDGDEERGVSVAKEEAAKARSGGNDSVHGDRADPQLDAAAFARRYGLATTAYELSIELTDADLKITRDADNAPLVDSVMDALVLVQSRHLPAVHRLVDAAARIDWADRERDIETAIKNLIDMKEKLNAAVEKARGLGLEASRDKGKRADSGRASGGRQNSGGRGTDGMSRANGDGDEGDDVGDDEEEDIVMTIVKDKDGYENGDGAPDGSDAPVSNAGDKEGYEATAQMDDADTDADADPNAAQPTGLTRVSLAPSISETPVPARGALPQKREKVKPVMEHDPTIGRTTLTFNEDCIVVRDVQKTSTIDPLAAPTDNENATRVNPSDVACEGNANANRNRDARNSRDSAEGDVVSTGGAEDKKERVRRLMKIAPVVPYGTDLSYWTGDILPTNANELQSFHRFWASKDIEPQPTSAFIDQVMSRVSYYEPMLEAVNHQCRAPIAGGRLCTRRDRERCPFHGKIVPRDDQGAPIGARADKAVDVPKGGAATNTTKRRREESGGGVERKRGKGETAEAVDAGGSASQSQSGRGGRRRANGGLEDVRPKETVRERIARRILHPAAVRRVGDAIEAYESQKHGDKYGSLWQYS* # ORIGINAL: g14217.t1 original gene structure, not modified by PASA NODE_743_length_18227_cov_54.4351 AUGUSTUS gene 7934 8962 . + . ID=g14217;Name=g14217.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS mRNA 7934 8962 . + . ID=g14217.t1;Parent=g14217;Name=g14217.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 7934 8962 . + . ID=g14217.t1.exon1;Parent=g14217.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 7934 8962 . + 0 ID=cds.g14217.t1;Parent=g14217.t1 #PROT g14217.t1 g14217 MSSNMASTAGVGSSLEDALAADQRNAVVIEVGTALTKCAFAGEPAPRFIFRTPKEVVSLRSVYEFGSNSNQSPLSSISDDDAVSGPLHDFFHDLYFKRLLVNPRERKVVITEDLTFPHRFKRLLLRVLFERYDVPGVVFVPTYVAALFAACTESAVVVDCGLQDTTIVPVYAGFPVAQAWEIAGVGGRDVFESFGKALDANIADAPTSDPANSRTMPPFVLEDAFIRTGFVASSSDSGALSSVVDCSYPLPNGKMLKVPAAIRASAAEALFGDNEDGLCIARSIADSILKVSVERRQCFDFPPRWSFQPKRTVCGLFLHLLHASPSVSLYSSVGVDGLMPAF* # ORIGINAL: g14214.t1 original gene structure, not modified by PASA NODE_743_length_18227_cov_54.4351 AUGUSTUS gene 828 3891 . + . ID=g14214;Name=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS mRNA 828 3891 . + . ID=g14214.t1;Parent=g14214;Name=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 828 1071 . + . ID=g14214.t1.exon1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 828 1071 . + 0 ID=cds.g14214.t1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 1146 1294 . + . ID=g14214.t1.exon2;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 1146 1294 . + 2 ID=cds.g14214.t1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 1518 1604 . + . ID=g14214.t1.exon3;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 1518 1604 . + 0 ID=cds.g14214.t1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 2608 2719 . + . ID=g14214.t1.exon4;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 2608 2719 . + 0 ID=cds.g14214.t1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 2846 2995 . + . ID=g14214.t1.exon5;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 2846 2995 . + 2 ID=cds.g14214.t1;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS exon 3359 3891 . + . ID=g14214.t1.exon6;Parent=g14214.t1 NODE_743_length_18227_cov_54.4351 AUGUSTUS CDS 3359 3891 . + 2 ID=cds.g14214.t1;Parent=g14214.t1 #PROT g14214.t1 g14214 MESIPCDACGDWQHVHCAGFVDAADLPQEYFCEACADGVKRKNVLFHVAPEERRLVALWRRLLCSLHKETYVTVIDIAHRLGIETGVAKSLMMRIEDEAFINKERKRKAVIQSKVTKEALRAYFLTDNEKLVDDTHKGADDTARRVPSTTTRGKRPAFEQPPKGKKVAAAPAGVAAKKAAKKVTNPLFEKRPKNFGIGGDVQPKKDLGRFVKWPKYIRLQRQKSVLLKRLKVPPALNQFSRTLDKNTATELFKLLNKYRPETKAEKKTRLTAAAKAKADGKTEAKNEAQKPYGAKYGLNHVTALIEKKKAQLVIIAHDVDPIELVVWLPALCRKMDVPYCIVKGKARLGTVVHKKTATALAITSVRNEDKASLAKLTEAVRHNFNEKSDEIRKSWGGGLLGPKSQARTAKIEKAKAKDAIAKLG* # PASA_UPDATE: g14219.t1, single gene model update, valid-1, status:[pasa:asmbl_9154,status:3], valid-1 NODE_743_length_18227_cov_54.4351 . gene 11935 13580 . + . ID=g14219;Name=g14219.t1 NODE_743_length_18227_cov_54.4351 . mRNA 11935 13580 . + . ID=g14219.t1;Parent=g14219;Name=g14219.t1 NODE_743_length_18227_cov_54.4351 . five_prime_UTR 11935 12354 . + . ID=g14219.t1.utr5p1;Parent=g14219.t1 NODE_743_length_18227_cov_54.4351 . exon 11935 13580 . + . ID=g14219.t1.exon1;Parent=g14219.t1 NODE_743_length_18227_cov_54.4351 . CDS 12355 13461 . + 0 ID=cds.g14219.t1;Parent=g14219.t1 NODE_743_length_18227_cov_54.4351 . three_prime_UTR 13462 13580 . + . ID=g14219.t1.utr3p1;Parent=g14219.t1 #PROT g14219.t1 g14219 MRPIRIVILGDTCGKTCLIRSLLFGSRALPEAHEPTVFELSSGIVTVQGLGDVMLFCVEVGSGNALDHIPDPYSSADVFLLCFSVASLNTFERIRRKWARDVRDFSSAPIILVGTQSDLRTVASTHPTHGGRDGFVTFDRAKQLADDLCEKKAPCKYLECSAVQNVGVREVFADALVLGFQCVKEKKGAFSKFFAKLSGKAPKAAVSKDDIGSVVKGQIIGSIRVSSDGVVIDDAPVEWSQYREEGRDADGSASEGKPDAVLAPQWNDTRAILGSLSPESYRKLRMAITRRPSGMLYRLDSKSGADGQVTLGVQSLALSEQNLVALDKLNPTPRDEFSSRRIREFVEHSSSAALEVTEPPRIESMTRE* # PASA_UPDATE: g14216.t1, single gene model update, valid-1, status:[pasa:asmbl_9150,status:3], valid-1 # PASA_UPDATE: g14216.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9151,status:12], valid-1 NODE_743_length_18227_cov_54.4351 . gene 6120 7579 . - . ID=g14216;Name=g14216.t1 NODE_743_length_18227_cov_54.4351 . mRNA 6120 7579 . - . ID=g14216.t1;Parent=g14216;Name=g14216.t1 NODE_743_length_18227_cov_54.4351 . five_prime_UTR 7484 7579 . - . ID=g14216.t1.utr5p1;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . five_prime_UTR 7278 7327 . - . ID=g14216.t1.utr5p2;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . exon 7484 7579 . - . ID=g14216.t1.exon1;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . exon 7237 7327 . - . ID=g14216.t1.exon2;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . CDS 7237 7277 . - 0 ID=cds.g14216.t1;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . exon 6120 7126 . - . ID=g14216.t1.exon3;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . CDS 6361 7126 . - 1 ID=cds.g14216.t1;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . three_prime_UTR 6120 6360 . - . ID=g14216.t1.utr3p1;Parent=g14216.t1 NODE_743_length_18227_cov_54.4351 . mRNA 6120 7578 . - . ID=g14216.t1.1.5b6be70c;Parent=g14216;Name=g14216.t1 NODE_743_length_18227_cov_54.4351 . five_prime_UTR 7484 7578 . - . ID=g14216.t1.1.5b6be70c.utr5p1;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . five_prime_UTR 7278 7330 . - . ID=g14216.t1.1.5b6be70c.utr5p2;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . exon 7484 7578 . - . ID=g14216.t1.1.5b6be70c.exon1;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . exon 7237 7330 . - . ID=g14216.t1.1.5b6be70c.exon2;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . CDS 7237 7277 . - 0 ID=cds.g14216.t1.1.5b6be70c;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . exon 6120 7126 . - . ID=g14216.t1.1.5b6be70c.exon3;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . CDS 6361 7126 . - 1 ID=cds.g14216.t1.1.5b6be70c;Parent=g14216.t1.1.5b6be70c NODE_743_length_18227_cov_54.4351 . three_prime_UTR 6120 6360 . - . ID=g14216.t1.1.5b6be70c.utr3p1;Parent=g14216.t1.1.5b6be70c #PROT g14216.t1 g14216 MSSKDRINIFPTRMALTTMKNRLKAAQKGHSLLKKKADALSLRFRAILGKIVENKTLMGEVMRVAAFSLAEATFSAGDISHLVIENANKASVRVRTKTDNVAGVKLPVFEHYTEGSDPYELTGLGRGGMQIQRCKETYARALTLLVELASLQTSFLTLDEVIKATNRRVNAIEHVIIPKVERTIAYINSELDEGDREEFFRLKKVQNKKKKMRAAGEAEEAEKKAASAAKEQARQLDYTTGLIDIANDITAGSGSQTISAQEAQDLLF* #PROT g14216.t1.1.5b6be70c g14216 MSSKDRINIFPTRMALTTMKNRLKAAQKGHSLLKKKADALSLRFRAILGKIVENKTLMGEVMRVAAFSLAEATFSAGDISHLVIENANKASVRVRTKTDNVAGVKLPVFEHYTEGSDPYELTGLGRGGMQIQRCKETYARALTLLVELASLQTSFLTLDEVIKATNRRVNAIEHVIIPKVERTIAYINSELDEGDREEFFRLKKVQNKKKKMRAAGEAEEAEKKAASAAKEQARQLDYTTGLIDIANDITAGSGSQTISAQEAQDLLF* # PASA_UPDATE: g14218.t1, single gene model update, valid-1, status:[pasa:asmbl_9158,status:12], valid-1 NODE_743_length_18227_cov_54.4351 . gene 10207 11507 . + . ID=g14218;Name=g14218.t1 NODE_743_length_18227_cov_54.4351 . mRNA 10207 11507 . + . ID=g14218.t1;Parent=g14218;Name=g14218.t1 NODE_743_length_18227_cov_54.4351 . five_prime_UTR 10207 10263 . + . ID=g14218.t1.utr5p1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . exon 10207 10275 . + . ID=g14218.t1.exon1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . CDS 10264 10275 . + 0 ID=cds.g14218.t1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . exon 10369 10398 . + . ID=g14218.t1.exon2;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . CDS 10369 10398 . + 0 ID=cds.g14218.t1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . exon 10704 10895 . + . ID=g14218.t1.exon3;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . CDS 10704 10895 . + 0 ID=cds.g14218.t1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . exon 11061 11231 . + . ID=g14218.t1.exon4;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . CDS 11061 11231 . + 0 ID=cds.g14218.t1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . exon 11367 11507 . + . ID=g14218.t1.exon5;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . CDS 11367 11426 . + 0 ID=cds.g14218.t1;Parent=g14218.t1 NODE_743_length_18227_cov_54.4351 . three_prime_UTR 11427 11507 . + . ID=g14218.t1.utr3p1;Parent=g14218.t1 #PROT g14218.t1 g14218 MASVGIIVAAIIAAAGWLVFVIGFGKQSTSQGAYYSLAVPSKTSAFYFCWWALAVGGLLVNLFFIFKAFSKSKIVGFLAIFFAAFSLVASGAVINANGQILWQCNKDESLTTCFNDIPTFIKLQFAGSLIYIFMMAISLGGLYYNAIQGEEAYA* # ORIGINAL: g14020.t1 original gene structure, not modified by PASA NODE_709_length_18798_cov_41.741 AUGUSTUS gene 180 425 . + . ID=g14020;Name=g14020.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS mRNA 180 425 . + . ID=g14020.t1;Parent=g14020;Name=g14020.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS exon 180 425 . + . ID=g14020.t1.exon1;Parent=g14020.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS CDS 180 425 . + 0 ID=cds.g14020.t1;Parent=g14020.t1 #PROT g14020.t1 g14020 VMAKFFSGTRVVGLNGKLDYPQVTRSSRMQHVAADKHATGADGVVLAANGKGGDPSSGSGSKQDNEFRQKFFRRLHITDWS* # ORIGINAL: g14021.t1 original gene structure, not modified by PASA NODE_709_length_18798_cov_41.741 AUGUSTUS gene 1007 6510 . + . ID=g14021;Name=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS mRNA 1007 6510 . + . ID=g14021.t1;Parent=g14021;Name=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS exon 1007 1313 . + . ID=g14021.t1.exon1;Parent=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS CDS 1007 1313 . + 0 ID=cds.g14021.t1;Parent=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS exon 1393 3396 . + . ID=g14021.t1.exon2;Parent=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS CDS 1393 3396 . + 2 ID=cds.g14021.t1;Parent=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS exon 3563 6510 . + . ID=g14021.t1.exon3;Parent=g14021.t1 NODE_709_length_18798_cov_41.741 AUGUSTUS CDS 3563 6510 . + 2 ID=cds.g14021.t1;Parent=g14021.t1 #PROT g14021.t1 g14021 MTVVPVAAATSLGGSTGTSRAASPSPSTTSTVAAACTSRPSSRPSSAGVRLCPLKGATWDAWLQDAAQSLARRLSANRQGFVRVFLSSPFSGMEEEREVLTKQHSAREAETLRICLRELDRSDIFVGFYGRRYGWHHRTDAVCRDALLDRNFDLAATEFPWILDYRDTASATFLEFKGAMQHASQERKMPTMFFFRDWKWDAKSAESASASDRFKYVGESAASCERIVALKEETIRHADCYAFDGYTDPSDGAARMFAALRDLLVRTIGMKREMEVQAGGRGGGGVAGSHPDGFIVDEEGALHDAFVVSRQRLYTGGDEHLAKVDAYFSGEWRHVDAVGGDGQSVSDGDVVSNDAGTLSVLANKIAATDGDDTDADADARVCIPLLVVGESGMGKSSLLANWVSRQWAAGRPNLFYHFIGCSEPSTRPDNILRRLATFLAGALGEQLSPSLQSLGGKESEALDGIAETINSYLRTALDRHVELYIVVDALDQAEDTAGRLLWLPLNWYGAHVVLSAANDTAAADTLQSRRYRTMELNPWECEQVEAFVDAALQPTGKQLSQAQRDCIVAARQCRLPLFLNLLVDELISYGSYEGLDAKIGGLLACNSAADLYGAVIGRLEDDFVDVVGVHRSPMKLQARAAAVFSAVAEGGGHGSGEEGEGEGEREREGSGEGPEEKPDNIVASILTALSICRLGLSESEISDVFGVSSGALAPVLYAMRHHLVAHSGLFSMHHNQLKQAATRRYLPEHYAASLGPRSIPNATSTALHADGSIPAKRVAEELFWVVGGLGSEESGTMRTLLLDPRLFGFLCLSGDAAFIVRAWMAIGTPPADVATMYMDAIERGGLIAAKTFDVEMTAAGFNPPEDAIWGLNPGARALFFQSLFFMQAGHIIMTLGSPELALSLFERAVSIRETFMDANTPHFAGSLMELAACHESISHPLSIQRAVDLVERAVAIFESTLIKKDRNELVRPLCALANLRRCQGRLDDAQMVLDRCVGILGLGVNYTPRDLVSHPHGAQIANQLASLHSDLGALDKALSLQHALLAHAEKLFGRESPPIVGHLETLSTLYSRKRLYAHALPLARRALDINIRTFSAEHKMVAMTMRTLGIIYIGLLEPDTALGLLHGSLAMFEKLVGPDHLFVIQLLQDIGGYLAEVGRSASALPYAVRAADTALRVFGEKNVTTYGALSLLGMVMVRHGNAAAALEPLSKALEGFRVMYGPKHPPVVSVLTELGKAQVLLGMAAEGRESFRNALELACQVIGPDSCEALTATSMMAAVVADGGDHDKAAVMLSGAVDLAARAFGRAHPMTLDMLIKLCGIHVAGGYGWEALAAAEMAVEYASARAEANHAIVAALSLMHCLAFQTCRRPLDVETTATAAIEVARSMPLSFGSDSKHLLGLRLLRAIARCDAFKFRDALVDCNFFFESVRSMAGIENMEDYTMALWITARVLEGMGRHRRAVTVACTAHEIALPRQSTRAQAPKAMYTATFGHVITAYIRVSLGGKTYSDTIEDDATEGNFAIDDAVPVPAEEAAPSGSAMSLLLDAPLSALSLARNLLLGAYAAIVKHDSADMDAGVAVRSMQGWCQETMASLALTTALCARQYIAAGSAPESTNVAESSCVVLASVCRAENAVERLFVEGIVGEQDVAHVLHVCATALVELTAAGQAACVAGVLRARDKVAAVHQWPLFLQCMAAVDAGAAVTDIFLTASVERLEKAREIWARVFGVESVAVRRALEDLALLASHPHESL* # PASA_UPDATE: g14022.t1, single gene model update, valid-1, status:[pasa:asmbl_8990,status:12],[pasa:asmbl_8991,status:13],[pasa:asmbl_8992,status:12], valid-1 NODE_709_length_18798_cov_41.741 . gene 6709 18798 . - . ID=g14022;Name=g14022.t1 NODE_709_length_18798_cov_41.741 . mRNA 6709 18798 . - . ID=g14022.t1;Parent=g14022;Name=g14022.t1 NODE_709_length_18798_cov_41.741 . exon 9048 18798 . - . ID=g14022.t1.exon1;Parent=g14022.t1 NODE_709_length_18798_cov_41.741 . CDS 9048 18798 . - 0 ID=cds.g14022.t1;Parent=g14022.t1;5_prime_partial=true NODE_709_length_18798_cov_41.741 . exon 6709 8805 . - . ID=g14022.t1.exon2;Parent=g14022.t1 NODE_709_length_18798_cov_41.741 . CDS 7211 8805 . - 2 ID=cds.g14022.t1;Parent=g14022.t1 NODE_709_length_18798_cov_41.741 . three_prime_UTR 6709 7210 . - . ID=g14022.t1.utr3p1;Parent=g14022.t1 #PROT g14022.t1 g14022 GTETHTYAVAGTVTLNITAYNDVSGEYVLTIIVVQERLGGLSALYADPLPIAVGSPFDFTVSLSAGTDVSYLWDWGDQTSTSNSADGNATHTYASPGTYSLNVTAYNDVSAESVIIHVEVIEGVTGLSTLFANPLTVAVGDMTSFDVQVSTGTGVSYLWDWGDGTSVSSTNVGTATHTYASSGSSTLNVTAYNDVSADYVFVSILAQEKVSGLSASYSVPRVVALGESFNYGVGLSSGTDLSYRWEWSDGTSPTESGSNIEEHTYNNVGLFSLNVTVYNDVSSEWVLISVKVVEKVSGLAALFNVPRSVPTNEAVSFDVSVSTGTDVRFSFDFGDSSLMIDTNGGSATHTYNVAGSRTLNVTAYNGASAEFILITVVVQERVTGLLSSHPNPLPVARGDAFTFTMGISTGTDAAFMWQWGDGTSTTVTGTDSSAHTYTSVGSWLLNVTAFNDVSSEWLVIDVKVLDKVGVLSTIHSPPISVTKGTPFSFFVGLSAGSSVTYLWDWGDDSSISTTGNGIESHSYDDAGSFTLNITAFNDVSATSLQLSVISNEKISGLAILQGATISAALNDDITINATVSAGTSITFSWDWGDGTTSDTADGGTSHQYSAIGVKPGSVDASNDVSSATTSFTVVVYERMAGLSLATGATFIPLGDQIYMQIRLSAGSDVLYAIDWGDESIPDSGSGFDYFHTYLSVGDYAIFVSGLNPISTLNATTMTYVEERITDIALTVEDLDSVSTAAPFVISATADGTTPTFTWIFSDGTTLYGPNISHTLSGDGWQSVNVTAANNVSSVSQTVEFFVMQPIAGLSVSVSSSSIAVGSQVFVSASISAGSNVTFKVDFGDDLPDSIQDGLESVSAVAHTYQQDGSFNITVYATNNIGEKGKIVTVTVLNSVTDVIIGAVTPVVAVGSSMPYPVSINVDAADTATCVWNFGDSGTATGLNVVHSFASAGSFDITVNCSNAVSSMSAQTSVIAAIPFSGSLNAIPTLATGATWNITVSVSAGDVLSFEFDVAGSPGFPQTTDSPTVSATFPVAGSILVSVQVLTVFNTTTFQTTVTVVDGITGLVATNVAHTGLGVATSFSASVTGGTGVVYSWSFEDGATYVGASFVRTFWDTGFYGGNLHASNDVSSRVVPFAVTAGVPPAGLGVSVGTIGSKIAYATTQTPMLLWADVTGGKNLTYRIDWGEGLAAIVVSADTVSSLQNTYGASGTYTVSVNASNIVGFTLDTATVVIETGLASATVSTVPSSAIPNAPVTFSAAVQPGGPSELTYTWYVDGTVTGSNLSTLTTSMASVALHNVTVVVHNKVSRAAGELTFQVVPPAADFALLPIAPVATGSPITATATIAGGVSSAHLTFVFAYGDGNTGAPSVLLSESHTYAVAGSYTITLTVRDIQLTTVATVQTTVTVQATIGQATINVPPSISLGVLAAFSASVSQGSSLTYAWGFASGSPGTSALSTPSVTFVKPGLLLVSLTLSNAVSSVTTSVNVTVTSFAIRLSRPAVDQNVNLRIARVAVQVQPVSMPLYVLPDWGDGSTAAAVTVPAASQNAITAGDPVVIELSRTYAIDGTFSATVFVVGGNKVNGTDSFAVTVIARISSVVCVRWTPSIPCLTVALSNTGPTNPAKPISIIATASRAANFTFAQSNGFSETSRNVTSSVATLIGSFASEGSYTLSATAANEVSAARDQTVAFVQNATCLPPVISIQSQGSSFLRSVAFSLSSSAQLNCSTSQRMRSEWRVWGPSGDSVKLPASVSTNLQSITFPARTLPAGTVRVELYGEMTGSSPLTYASVSFYVSIVSSNLVARIAGGSTRTAPLDQGFVLNATSSTDPDDTTTRLSYAWSCTPDDLSSSATCLLDSSPFATNASTLNVPSLSIVAAGSYLFRVNVTSQDGRSSVASARVVAVAGSPPVMSVECTGDCPDKASPNARLKLVAKCTNNCGQGRSGLAYQWYVLNGKGAIRPEVDVNGTAFSVTGGNSDSFVVREKVLVAGETYVFGVRATFAGATGSAEISKVVNKPPTAGNCSVDPWEGTTLSTAFNIICENFADDAGDLPLTYTFSYATSTGSALRFFRGQRATASTLLPAGLESVNYTVVVSVDVEDRFGATAQTVFSTAYVRDPTSPGANAKALTNLAVGNNSALSSLVNSGSTDDAIKLLSVLSAVLGGSTSSESNNDTSARSDVRSAVVDSIRTITSLVTPTDEGQVKQLAGLLADVTSTAGELSGDAQGSAMSTLLLLSQAVSSGIDSSTGDVLVNGVSNILKASGNSSDSSDAQKKNVGTQALAAIDSVSQGLLSQRIVGEAVTIITTVVEVVATRSDSSNIPDAQGAGGSGVSLPSNSSALFKPGSLSPGDTVDSSLASFKSNPFQFAASAEGLGAQVVSFSFFKPGGTELEVSGLAEKIAISIPRDTSPSEFLNRTVPASSRVRHTFSVASLYKGTSLGIWIRPSLTASNSTSNNSTKLMLSVYLALSRQPTATDFDQIASLDVSPSRFVSNSDHPTFLVDADSLGSWMMVVENTNAAAIDYKFAVVQLSCRYWNATRLEWLSDGCTLSNSTSYNSTVCLCDHLTSFAGEFVVAPNKIDLLDDAVAFLHISDNPVCFATVMTVFGIYIIVVIISRRYDNLDRIRIGFMPSRDDRTPKDWCKYEVSIHTNSRPGSGTDCRVTIALFGENGSSATRCLDTGLVKHFERGAADRFLVSTRNDLGDLKKVRLGLDRSGQKRTWNVDRVIIRNKATGMVWYFLCNGWMSSAGLAENERAIRDVPKAEEAKYNRFAARIIYNTKSDFRDQHLWFSVYAKPERSRFTRVQRATCCLSLLLSVMAVNMAYYETSRTDSSDAFAFSAQDVFVGVISGLIAFPINILFAFLFRNSRIKTSTIKVSPAPDASNFPDGAPMAGESDPMSSLPDTRRGKRGSVLDMWRTFLVDENAAGVGGATSATGGNASDLQDAQAADGKVRDAAVAFKKPAVAISKPGVAIERRTAWDSFQEWYEPTRKVDPVNLAAIENTQMEMERKVDPVVVSYYRRRLRKFPHWVVYIAYFGCYAVSAFAAYLIVLYGFNFGKQKATAWVRSILFSLIESLLLTQPIKVVILAFLAAIVVRRDKHTVRYDFGSLADLHNRAVVVSLGAKQKLAEMNRSLTSLLEENRMQERTPQEKFYLRVLRELFLYAGVILMLFLVIYVDRGMNPYYVDKAFTESLVLSEVNGSTFADITSATEFFDWAENNLVPSLHGGGTRKPLEDFNAKLLGVARFRQLRVREGSCDVNEKFIQYINTCRAPYSKHAADVNSFGGPTRSIFNYTAPGNYGGSSFWGQLATYPAGGFIVNLGSTLDQSAAIVANLRKELFVDAFTRAVFIEFTAFNANAGVFLVATMLVEFPPTGGAIATYDILSSTLLLYDTPTDFLILFFQIVFIILVIVRFVVQGLGIRREGFFAYYKDVANIADAIVNLFYIATIVVGGWRFFEARTAMANYHDAPNNFTNFRSASAADNIFDTMLSFALFLTLLLSFRFLRHTKELRIIMRAFYVAGTDLFQYTFIFFLVFMSFAQLGYLLFGSTLEDYRTVGQTVFTQLNIILGVFDIKEMMQQYRVLGPLYFVSFNSLVLFTAMTMFIAILIETYTIIYIKDSNDASDGIFQIVKKFIKEVMGDPEEAPAVAASEAVGVFATETVGEGDQADAPHTPPAVASIDKASPTAGPKKKKKKSVAARQASTDDGSEDADVGTGQPKKLKPRKTSKAKRENSADVDAGAGSGSGTADAGGLSDNASVDERLSNILAKLDAAEKKVDSIVASSS* # ORIGINAL: g11300.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 16498 17890 . - . ID=g11300;Name=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 16498 17890 . - . ID=g11300.t1;Parent=g11300;Name=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 17867 17890 . - . ID=g11300.t1.exon1;Parent=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 17867 17890 . - 0 ID=cds.g11300.t1;Parent=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 17644 17741 . - . ID=g11300.t1.exon2;Parent=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 17644 17741 . - 0 ID=cds.g11300.t1;Parent=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 16498 17533 . - . ID=g11300.t1.exon3;Parent=g11300.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 16498 17533 . - 1 ID=cds.g11300.t1;Parent=g11300.t1 #PROT g11300.t1 g11300 MAPSLDIEARVQEHAKFFNRLVGLIPAKFYLPETDEQTSDRYNKYLQNKSGKAPKQAIKERVRTAKKIKLDPDEQKSVLEIQSDIAKKISDGHADASDDESDDGENENDSDDDSDDADELPHKERPSAPPTWPDKFSAKSASITELREKLHARLEALRGKRKAPAVVGGADAKADGKRRLDKGTNKKKRAREEKEKKSLVKANSIDDGPAAKRPRTDASGPVVNEKGEVVFSKFDFGKAADVKKKKKGKDVKSLLVQAEKEKEKIEKLKATDEEKAKEVLAKKAWRKAMDMAEGVKVKDDTTLLKKTLKKKEKEKKRSEKVWKERKDSVAQTVAKRQEDRTKHLQERIQQKKDKRLGKKAPKSKASPGKKRAGFEGKKTKFAKKK* # PASA_UPDATE: g11302.t1, single gene model update, valid-1, status:[pasa:asmbl_3877,status:3], valid-1 NODE_224_length_30718_cov_41.097 . gene 20859 22979 . - . ID=g11302;Name=g11302.t1 NODE_224_length_30718_cov_41.097 . mRNA 20859 22979 . - . ID=g11302.t1;Parent=g11302;Name=g11302.t1 NODE_224_length_30718_cov_41.097 . five_prime_UTR 22928 22979 . - . ID=g11302.t1.utr5p1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 22838 22979 . - . ID=g11302.t1.exon1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 22838 22927 . - 0 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 22406 22573 . - . ID=g11302.t1.exon2;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 22406 22573 . - 0 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 22053 22202 . - . ID=g11302.t1.exon3;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 22053 22202 . - 0 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 21741 21855 . - . ID=g11302.t1.exon4;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 21741 21855 . - 0 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 21413 21480 . - . ID=g11302.t1.exon5;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 21413 21480 . - 2 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . exon 20859 21180 . - . ID=g11302.t1.exon6;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . CDS 21103 21180 . - 0 ID=cds.g11302.t1;Parent=g11302.t1 NODE_224_length_30718_cov_41.097 . three_prime_UTR 20859 21102 . - . ID=g11302.t1.utr3p1;Parent=g11302.t1 #PROT g11302.t1 g11302 MELKGTLASSLGQPGLNINAPIQAAPPPTQPAAAAAVVAAVATGQEDAASAVAGTQSNVAPIAGGGAAAVAQRAVNPQQRALGQVKRTRPVATTRINSVGAIAKTERANGSLNKERLQALIDEIKPKESVDEQLEEMLLEIGDDFIENVTTFACQLAKLRGSKRIEVRDIKLHLERNWDIKMVDIDPEEKEERPTKRVVPTDAYLEQLRLAKSQRHQPRSNN* # ORIGINAL: g11303.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 23251 26125 . + . ID=g11303;Name=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 23251 26125 . + . ID=g11303.t1;Parent=g11303;Name=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 23251 23441 . + . ID=g11303.t1.exon1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 23251 23441 . + 0 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 23580 23727 . + . ID=g11303.t1.exon2;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 23580 23727 . + 1 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 23897 24032 . + . ID=g11303.t1.exon3;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 23897 24032 . + 0 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 24137 24295 . + . ID=g11303.t1.exon4;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 24137 24295 . + 2 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 24575 24633 . + . ID=g11303.t1.exon5;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 24575 24633 . + 2 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 24817 24863 . + . ID=g11303.t1.exon6;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 24817 24863 . + 0 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 25035 25090 . + . ID=g11303.t1.exon7;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 25035 25090 . + 1 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 25358 25430 . + . ID=g11303.t1.exon8;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 25358 25430 . + 2 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 25592 25699 . + . ID=g11303.t1.exon9;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 25592 25699 . + 1 ID=cds.g11303.t1;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 26023 26125 . + . ID=g11303.t1.exon10;Parent=g11303.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 26023 26125 . + 1 ID=cds.g11303.t1;Parent=g11303.t1 #PROT g11303.t1 g11303 MAASKTVLNFSAGPAKLPRAVLERARDELLDYAGSGMSVMELSHRSKEFEGIIARAEQRVRSLLHVPSNYKVLFLQGGGSTQFSAVPLNLIGKEGAPADYVVTGHWSSLAAKEAQKYATVRYVLSGNGKKVASIPPTSEWALSPDASYVYYCANETIDGVEFNFIPETGAIPLVCDMSSNIMSRPIDVTKFGLIYAGAQKNMGPSGVTLVIVREDLLAKALPSTPLMLDYKLMADTKSLYNTPPTYSIYIAGLVFDWIHEQGGVEAMDLLSAKKAGLIYGAMDASDGFYRSRMNLPFRIRGGNTDLEDRFIVGADAKGLLQLRGHRSVGGIRASLYNAVSVEETATLAEFMREFAAANK* # ORIGINAL: g11296.t1 original gene structure, not modified by PASA # ORIGINAL: g11296.t2 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 2119 4536 . + . ID=g11296;Name=g11296.t2 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 2119 3451 . + . ID=g11296.t1;Parent=g11296;Name=g11296.t2 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 2119 3451 . + . ID=g11296.t1.exon1;Parent=g11296.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 2119 3451 . + 0 ID=cds.g11296.t1;Parent=g11296.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 2119 4536 . + . ID=g11296.t2;Parent=g11296;Name=g11296.t2 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 2119 4536 . + . ID=g11296.t2.exon1;Parent=g11296.t2 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 2119 4536 . + 0 ID=cds.g11296.t2;Parent=g11296.t2 #PROT g11296.t1 g11296 MTSFSMSSRQLDSLRDEADVELARQDKEMEDALQRLVAEMGIDAGTLSMIEHHGADDSDEDYEELLHNRPVSAAVHLPLASAHNSRHEVTSDESIVSDESTKTRLRAAVSHAEDIRRNAAAAHERHMEEIAHLESECAALKRECGKHAMEGTRAAQAEASVNELSRRCKILEDEKDAAVERALVVQRIADDHKEAADSLRSELLNTTAEMAKVQKRCNDLESACAESNARENTHKEENARLESECASLRLLCAKHATDAARAAHAEANVGDLARRCASLEGDRVAAVARADALQRDLLLATTEASAKIETAVATKCAELSEKLAAAEREAAKVESARKKDAGDQCELIARLEAECMRLRGELSSLHATKAALLESGQPRTLDSPAGDNNRTPTRGRPDCPGATVDSQFILAATPPPVEKSATPMALRSALGALEDQLRQARAAL #PROT g11296.t2 g11296 MTSFSMSSRQLDSLRDEADVELARQDKEMEDALQRLVAEMGIDAGTLSMIEHHGADDSDEDYEELLHNRPVSAAVHLPLASAHNSRHEVTSDESIVSDESTKTRLRAAVSHAEDIRRNAAAAHERHMEEIAHLESECAALKRECGKHAMEGTRAAQAEASVNELSRRCKILEDEKDAAVERALVVQRIADDHKEAADSLRSELLNTTAEMAKVQKRCNDLESACAESNARENTHKEENARLESECASLRLLCAKHATDAARAAHAEANVGDLARRCASLEGDRVAAVARADALQRDLLLATTEASAKIETAVATKCAELSEKLAAAEREAAKVESARKKDAGDQCELIARLEAECMRLRGELSSLHATKAALLESGQPRTLDSPAGDNNRTPTRGRPDCPGATVDSQFILAATPPPVEKSATPMALRSALGALEDQLRQARAALDAACVRERARAMEIESLEDVISKIERDARHIKTVASESLRAEYERRIDEVREVCAKERRRAVQAEREKFDRMLDEMRASVIDTRNKSLSRMRSVVAEERRKGRVLESEKEILAQRIAELAASGAVDGVTPRSLSAERAHIHRTERKNADDEIGDNDGNDGSDAAHWKSSPQAVASSRPLPGGSTAVTSAESEYDRCAAGIRAEIVRVRSRAGGHAHDAGVDSPLARGHEARDTQYEAMPLSHRGMLERTPASDHRRRFEGGTEAPHTRKDDLYLARTPAGSDRRHVGAPLHADDGYATASPYTPLTHRTAHGPRKSAAEVRLGDDTDPRGRAAANALDVLGDDGTVDVFDRYVSEWRTSAF* # PASA_UPDATE: g11295.t1, single gene model update, valid-1, status:[pasa:asmbl_3879,status:3], valid-1 NODE_224_length_30718_cov_41.097 . gene 534 1885 . + . ID=g11295;Name=g11295.t1 NODE_224_length_30718_cov_41.097 . mRNA 534 1885 . + . ID=g11295.t1;Parent=g11295;Name=g11295.t1 NODE_224_length_30718_cov_41.097 . five_prime_UTR 534 603 . + . ID=g11295.t1.utr5p1;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . exon 534 913 . + . ID=g11295.t1.exon1;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . CDS 604 913 . + 0 ID=cds.g11295.t1;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . exon 1021 1200 . + . ID=g11295.t1.exon2;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . CDS 1021 1200 . + 2 ID=cds.g11295.t1;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . exon 1377 1885 . + . ID=g11295.t1.exon3;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . CDS 1377 1576 . + 2 ID=cds.g11295.t1;Parent=g11295.t1 NODE_224_length_30718_cov_41.097 . three_prime_UTR 1577 1885 . + . ID=g11295.t1.utr3p1;Parent=g11295.t1 #PROT g11295.t1 g11295 MEQHDASAATTANAHPNSWAPYPPLGDRNEATRVKNKISARKSRERKKTYMRELEERLEFLNGENEKLVLYIRNHQCFHAQDAPPPVALTAPPAPPERLADPNAAASNDTGKCDHCHGAVKKLVKRGLYRFCSMRCAKAHVALGAAVPAFLGNTATKKKSARPDAECQGWDVPRVQEYITSIGFEKYKQVFLDHEIDGRALVQLDRDQLVTMGLKLGPAINIESRIAEL* # ORIGINAL: g11301.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 18519 20541 . + . ID=g11301;Name=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 18519 20541 . + . ID=g11301.t1;Parent=g11301;Name=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 18519 19445 . + . ID=g11301.t1.exon1;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 18519 19445 . + 0 ID=cds.g11301.t1;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 19617 19759 . + . ID=g11301.t1.exon2;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 19617 19759 . + 0 ID=cds.g11301.t1;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 20120 20198 . + . ID=g11301.t1.exon3;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 20120 20198 . + 1 ID=cds.g11301.t1;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 20413 20541 . + . ID=g11301.t1.exon4;Parent=g11301.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 20413 20541 . + 0 ID=cds.g11301.t1;Parent=g11301.t1 #PROT g11301.t1 g11301 MGASGSRIEKSLGDSIPEDERYYGLENFGNTCYCNSVLQALFFCRPFRKCVLTHEDAVTAGTAPPDDLLACLAELFAHISGQKKRCGVVAPRKFIARLRKENEAFRGYMHQDAHEFLNYLLNTIAEVLVTAEKKKTRLPKAVNGASSIVSDGRARDVLESSSARGTLSRSPATTPDRPATAAVGGARIATDSMSNGACNGCEKPASVTSSGSEPVTWVHRLFEGVLTNETKCLCCESVSSKDESFLDLSVDIEQNTSITGCLRNFSSTETLCREHKYYCDVCGSLQEAQKRMRIKRLPPVLALHLKRFKYMEDLHRFRKLHHRVVFPHELRLFNTSDDAVDADRMYDLFAVVVHVGGGTNHGHYISVVKSHDHWLVFDDDNVELMQGSDLKSLFGLAHEAGGAQQTSESGYILFYESREVTDGAL* # ORIGINAL: g11299.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 12878 15363 . - . ID=g11299;Name=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 12878 15363 . - . ID=g11299.t1;Parent=g11299;Name=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 15257 15363 . - . ID=g11299.t1.exon1;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 15257 15363 . - 0 ID=cds.g11299.t1;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 14189 15115 . - . ID=g11299.t1.exon2;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 14189 15115 . - 1 ID=cds.g11299.t1;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 13866 13964 . - . ID=g11299.t1.exon3;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 13866 13964 . - 1 ID=cds.g11299.t1;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 13246 13507 . - . ID=g11299.t1.exon4;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 13246 13507 . - 1 ID=cds.g11299.t1;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 12878 12988 . - . ID=g11299.t1.exon5;Parent=g11299.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 12878 12988 . - 0 ID=cds.g11299.t1;Parent=g11299.t1 #PROT g11299.t1 g11299 MSTDSLTTPLLPARRNDEAMYGVTRTYSNPFAYCMGINYVIGTGVFALPHAFWTSGLLLMGLTILIGAVASMLCAYYTLEVLARAEGIQSLKEQSNIPDDDESSELKVNSESTPPAHRITYRKFDFTILSRVFGGFKTKLFTQTTMTFYCWGAMWAYVAVFAGSIVTVFFNYVLDGEDCDISDSDASDSCKRSYYIAVAVYACIVVPLTLLDVAEQMYVQAALTVYRFSSFIVMIITVCIAMAHQPALVREQAKEDYGFKFSGFVAAFTSSIVALNFHYNMPDVIQPVRDKKRLRLVISASLITATTFYIVIGSLCAIYFGENTNEIITKNWSAYTGCGDGWEKCSSSGRSAKAIVVQLWVLLFPICDMVSVYPLIGITLSNNLMEMVPASMKLRYSPRVLRIATRLGSTIIPLILGAAVGSLSTIFEFAGLFAFFLEFLIPCGLHIVSTQLCRKTWGHGSERTEYSGWYSRLGITWTIIVFSSMALLFSIVAKIRPSLFE* # ORIGINAL: g11298.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 8834 11932 . + . ID=g11298;Name=g11298.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 8834 11932 . + . ID=g11298.t1;Parent=g11298;Name=g11298.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 8834 11932 . + . ID=g11298.t1.exon1;Parent=g11298.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 8834 11932 . + 0 ID=cds.g11298.t1;Parent=g11298.t1 #PROT g11298.t1 g11298 MDRGTAASGVSGESCDNVHKWCKHAVPTQCTLLLEQGSREAICQTESLRGATTAPCDAVNVCTHVSEYDHADCLYDEGRIGEALALYLAAGKCGCVCAEYKAGLILYDVDANEERTDAAALSHLTRAANSGHVPAMYMVAIIHLDDDPASTLRDVRAGVQSLRRCAVAGDPIAAFELGDILANGLYGVPVNLHLAKQLFVNSARRGHVGAQFTLGNAWLKVRAKAGDVDAQCILGERLVQLARRCVPSQASSSVGDCETALTCKRSESDYDAHKDKGNPTANDARVAEGVSWLRRSVESGCGRAMLALGRHLARVVTDNSVSSAADTGSNDVRDEALRLLACAKAAGVDGAAEAVPCCFPYDVDVNDRIPLSADVFGGGGLGLGSCGFPSPFERECDGGFGFYDSTSVGFKGRARTLRELEIVRLSAAIREKRGWDTKRTDPSIVDKWQREAISQGTSPAVFNYVLRELDHFSRLRCGAIEAGGVDGTWIAHGLVGGALHSRLIECVLCMEDVPAHVRDWHPGSKGSVLNLVHPSLYCYVHGVTCITQEAAIPPLRWMGAGAPDIGPRAEIHVTDGMSAAGPHSTHDSSGANQGTNAPWMPQQRDDGQFASRTYQWLPAEFDVRSDGKVSIASYVNNLHPWHCRAMYRVLEDVFSLFVPLFSRVLTDLAESRELPKYRRVEFLAFVPREPHSVDDMNEDDDDHQERDYGSITEDDNCDAVCSDSEDWAALTNAIVTDAPLHPNDSVTHVRADMFSTRSGASANVHADGNDGQGLAHNGSRDHAIATPAAVDPWEPRIPRFAMPTPPARVVDLRGRRLQVIVKMANTVLTPDNPDYEGGVWHVEGMQNESIVATGIYYYSCDNLTESRLHFRSAIAEPRYDRDPQMLRTAYGITDRSQLTQVLGSVLTSEGVCLAFPNTLQHRVSPFGLADQIRSGVRRTLVFFLVDPTKHVLSTLNVPPQQRHWLQEAVAHAGGHVRRLPPELLAQIMDRLAWPMSHEDALRHREALMKERKYIVDEQGRECFERTFSLCEH* # PASA_UPDATE: g11304.t1, single gene model update, valid-1, status:[pasa:asmbl_3878,status:12], valid-1 NODE_224_length_30718_cov_41.097 . gene 26536 30441 . - . ID=g11304;Name=g11304.t1 NODE_224_length_30718_cov_41.097 . mRNA 26536 30441 . - . ID=g11304.t1;Parent=g11304;Name=g11304.t1 NODE_224_length_30718_cov_41.097 . five_prime_UTR 30384 30441 . - . ID=g11304.t1.utr5p1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 30324 30441 . - . ID=g11304.t1.exon1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 30324 30383 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 30017 30198 . - . ID=g11304.t1.exon2;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 30017 30198 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 29451 29676 . - . ID=g11304.t1.exon3;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 29451 29676 . - 1 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 29051 29197 . - . ID=g11304.t1.exon4;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 29051 29197 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 28668 28791 . - . ID=g11304.t1.exon5;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 28668 28791 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 28283 28437 . - . ID=g11304.t1.exon6;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 28283 28437 . - 2 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 27826 27980 . - . ID=g11304.t1.exon7;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 27826 27980 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 27388 27571 . - . ID=g11304.t1.exon8;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 27388 27571 . - 1 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 27102 27223 . - . ID=g11304.t1.exon9;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 27102 27223 . - 0 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . exon 26536 26885 . - . ID=g11304.t1.exon10;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . CDS 26756 26885 . - 1 ID=cds.g11304.t1;Parent=g11304.t1 NODE_224_length_30718_cov_41.097 . three_prime_UTR 26536 26755 . - . ID=g11304.t1.utr3p1;Parent=g11304.t1 #PROT g11304.t1 g11304 MRLEGRTIGVMITASHNPEEDNGVKIVDPMGEMLEASWEAHATRLANAPDDAVGRVLREIAMETKTDLEIQPHVVFARDTRPSGLLLVHALVKGLEALGTAFTDYGELTTPQLHYMVRCINTREEYGKPTEDGYYEKFSRAFRRIMGAPTKHYEPRRLSMPSLPVLHVDCANGIGAPKLRRLIPMISDVIDIRIVNDGSGRLNHNCGADHVKVQQRIPENVAPTNGARFASIDGDADRLVYFFTENGEFRLLDGDRIASLFAAFIGDRVRVAGLNLHVGVVQTAYANGGSTNYLTRSLGLDVACVETGVKYLHHRAVEYDVGVYFEANGHGTVVFSDRAIHAIAGIDRSGAPERSRAAEDLQATVQLINQAVGDAFSDLLLVEAILARNVWTLSDWYAQYHDLPNRQLKVQVRDRTVIRTTDAERKCVSPHGLQHEIDRLVAQFQNGRSFARPSGTEDVVRIYAEANTQQAADALAANVARAVYDLAGGVGPRP* # ORIGINAL: g11297.t1 original gene structure, not modified by PASA NODE_224_length_30718_cov_41.097 AUGUSTUS gene 5238 7464 . - . ID=g11297;Name=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS mRNA 5238 7464 . - . ID=g11297.t1;Parent=g11297;Name=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 7228 7464 . - . ID=g11297.t1.exon1;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 7228 7464 . - 0 ID=cds.g11297.t1;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 6737 6956 . - . ID=g11297.t1.exon2;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 6737 6956 . - 0 ID=cds.g11297.t1;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 6196 6455 . - . ID=g11297.t1.exon3;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 6196 6455 . - 2 ID=cds.g11297.t1;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS exon 5238 5642 . - . ID=g11297.t1.exon4;Parent=g11297.t1 NODE_224_length_30718_cov_41.097 AUGUSTUS CDS 5238 5642 . - 0 ID=cds.g11297.t1;Parent=g11297.t1 #PROT g11297.t1 g11297 MDPAGAAPTQKLCTNGNWNAGMAAVGVDGVRLRDETVAALCARGCVELVQCIGAFCGWNVCSVHQGSSPSVDEDCAVHVLLYDTDGLATVRSALVRQREQSPNPTSWERETQAAAIAFGALRGLARLHSYKIAHCAVSLDSLFVCADGHIKLGMFHKCRYFPHFAHTAATKVSGNETNGLEESDARSVTPADQNATSANGANDVSAANALGEDSLNNALWGRLVEIDIGAIALCVLSVVKHTQETAFANKRRSMTSKSPLIPACVVPVSMMLELQSQQTVRVKVKRAPARRMSLFLVHETNAVPGFRVRLPWNRRPILVCNLLILHIVNVGAKVSLALPILLIRAPQCGRLSRSRLLSPTHARCRSVVIITIT* # ORIGINAL: g9301.t1 original gene structure, not modified by PASA NODE_614_length_20146_cov_46.3497 AUGUSTUS gene 2128 9282 . + . ID=g9301;Name=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS mRNA 2128 9282 . + . ID=g9301.t1;Parent=g9301;Name=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 2128 5928 . + . ID=g9301.t1.exon1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 2128 5928 . + 0 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 6068 6620 . + . ID=g9301.t1.exon2;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 6068 6620 . + 0 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 6848 6994 . + . ID=g9301.t1.exon3;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 6848 6994 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 7121 7243 . + . ID=g9301.t1.exon4;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 7121 7243 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 7352 7462 . + . ID=g9301.t1.exon5;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 7352 7462 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 7607 7711 . + . ID=g9301.t1.exon6;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 7607 7711 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 7821 7886 . + . ID=g9301.t1.exon7;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 7821 7886 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 8010 8114 . + . ID=g9301.t1.exon8;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 8010 8114 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 8251 8316 . + . ID=g9301.t1.exon9;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 8251 8316 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 8452 8556 . + . ID=g9301.t1.exon10;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 8452 8556 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 8678 8743 . + . ID=g9301.t1.exon11;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 8678 8743 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 8920 9021 . + . ID=g9301.t1.exon12;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 8920 9021 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 9158 9282 . + . ID=g9301.t1.exon13;Parent=g9301.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 9158 9282 . + 2 ID=cds.g9301.t1;Parent=g9301.t1 #PROT g9301.t1 g9301 MSHHRAKSALGYLAHDMGWRSESPSSVSSADDYAPSPSRHRNHGHHAEHLTHEGLESPLQTRSPSSIHADMTSRSWLKLNGLKKNNLTLQQILEGRRLGDGERPHSPAGDGFVASYQLADGTTREVYLLNADLEKLEKKLLSLIRACQRRIEWLGKASRRVFGTLVEDGVTIVVDFSDGMAQSVHEVKQALRFLISEQVRMRRRFNIIAYATEAEAWEETQVDVTEESLDSAWTWLQEMQAGGQANLYDAVKLALEDQSTDAVYVVSSGRTNTDAKRLVRLATDLNSIRGRPVNTVAYNVESDEGVQVLKTLAVETGGRFHMFVAGSRGSDPSFESDDIFILDRETERAREVLARLLGLQAESSVASHHGHGLHGIESPPPHARPLTASRSRTGVRSPLSHSVSMSVRHSGSARRHPHVHEPRRPTSAASARHLPSLEHSLRPKSPSRAPSSLARSHSSLGHHRAHSPSATAGSHHHDHAASAASVHHSASASSMHHESTVDLRKKDDALLDGRRWVLKHGVGTKSIAAMEELLASGMRADVASPLLDRHEQNLRDIVASCKARTKWLRQSSRELFGNVLERRAVFAIDTSSSMKPRMEFVRDRIRSLLNEQIKGMDSFNIIRFDTTVDAWAHRISPVTERNLDDAWEWVRRLEAKGTTNVEAALKIALSDADADAIYLVTDGVSDRSIIEVLETVRAINTRSIPIHAITFGPADASQATREQTVGEEFALRLAAQTAGRYLSVRWDGKRWRGVGDDLRIVKAETARAAALIQRIRAFRGDPEERGRSRSPVRTLNASTHGHSSSRAASAERSRSHSHGRTRASSPKHGHDHVDASISGTRMSLLEHHRRGRVRPFEEPVTSRQWLAEYGLEHRRLVARREDLHGERLRDYVSRLETALAMYRRRHEWLCSGSRRVFGSVVGDNVVFLVGTSRTLAGEAAFVKDEVCRLLQEQLDPAHRFTVVAFDAKIRTFRDALSDATSDNVLGACEWVQKLGTGDGADTIGALRTAFSIKDTDAIYLITDRVPDHNVRLILDEAAELNARVSIPIHTVSFNCVDVEANDFLAQLAEESGGRYHYYIRTGLDAEYEGEDVRLMRLEIERAETLLDIARSWELYLPGDERRRELMRTAQAVSLQRPSSAPPTRHRVFGPDIAIASGRSILRSGLVRSATPSPPRRVREFDAYVTQDELVDIRTHRRRRHSPGLYSDVHIGQRVIVRRDSDGFFVDGSIKVIAEDGKCLVISDTGSSWWVERDNLLTREENSRTIVAIGCRVLARSVVEKGSYIPAIVEGGRGDLWDVLFYNNVQATVDSADVFWLSIDQYDRVCLYIRERVAAEINKLRREMDHLDDDYVETIQSARYASAVHGRSLSRSRSPTLTRSRSRSRSKSPTLSRSHAVSHSATHVPHYEGYRTSSSITSTSRGPSPSRTRGRSPSRLAESTTKRPPLPTRTDDVGNSTADKKELQNDVRQLERLRWLQERARIDEKKSKTKEVEEEKKKLQEERHRWWLERSKVIDRQRAEKTKKKAEEERHKREEDLRKMKEEALRIEAAARLKLWKSQVAGRVAVEKSHGDSKAKAEEIARYKEIERRLKDIDLERKGQKEREMKDSWKREVKEKRDLEALRLQEDLDKKLRLVEERRRSKEHERRLSVEDLRHSQERRWMTDDVKRKDIEMQQRIERERLAEESRAKQRDEERRKREQERLQKAEEDRIAKKHGADMVIYHKKLAEAHRRQEDVQIRLLQEARMKADELRHKNEDARRKTEVAEQARSHGLAEELTMLRREEIWRRKELEYKQRFDVQRRSLDAKKEKVDFDLTNMRTRIEQR* # PASA_UPDATE: g9304.t1, single gene model update, valid-1, status:[pasa:asmbl_8492,status:12], valid-1 # PASA_UPDATE: g9304.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8493,status:12], valid-1 NODE_614_length_20146_cov_46.3497 . gene 18119 19865 . - . ID=g9304;Name=g9304.t1 NODE_614_length_20146_cov_46.3497 . mRNA 18119 19865 . - . ID=g9304.t1;Parent=g9304;Name=g9304.t1 NODE_614_length_20146_cov_46.3497 . five_prime_UTR 19707 19865 . - . ID=g9304.t1.utr5p1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . exon 19559 19865 . - . ID=g9304.t1.exon1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . CDS 19559 19706 . - 0 ID=cds.g9304.t1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . exon 19154 19246 . - . ID=g9304.t1.exon2;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . CDS 19154 19246 . - 2 ID=cds.g9304.t1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . exon 18679 18774 . - . ID=g9304.t1.exon3;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . CDS 18716 18774 . - 2 ID=cds.g9304.t1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . exon 18119 18338 . - . ID=g9304.t1.exon4;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . three_prime_UTR 18679 18715 . - . ID=g9304.t1.utr3p1;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . three_prime_UTR 18119 18338 . - . ID=g9304.t1.utr3p2;Parent=g9304.t1 NODE_614_length_20146_cov_46.3497 . mRNA 18415 19865 . - . ID=g9304.t1.1.5b6be70c;Parent=g9304;Name=g9304.t1 NODE_614_length_20146_cov_46.3497 . five_prime_UTR 19707 19865 . - . ID=g9304.t1.1.5b6be70c.utr5p1;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . exon 19559 19865 . - . ID=g9304.t1.1.5b6be70c.exon1;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . CDS 19559 19706 . - 0 ID=cds.g9304.t1.1.5b6be70c;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . exon 19154 19246 . - . ID=g9304.t1.1.5b6be70c.exon2;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . CDS 19154 19246 . - 2 ID=cds.g9304.t1.1.5b6be70c;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . exon 18415 18774 . - . ID=g9304.t1.1.5b6be70c.exon3;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . CDS 18716 18774 . - 2 ID=cds.g9304.t1.1.5b6be70c;Parent=g9304.t1.1.5b6be70c NODE_614_length_20146_cov_46.3497 . three_prime_UTR 18415 18715 . - . ID=g9304.t1.1.5b6be70c.utr3p1;Parent=g9304.t1.1.5b6be70c #PROT g9304.t1 g9304 MSGINVSPRPYPVVIPTPTAGQAIKNFSAGDLGMIVFGTAASAAFGLINARKSGMYRTGLLLCGSTGLIGSFFFSLKNSTERLIGMRENIREQRAHGLA* #PROT g9304.t1.1.5b6be70c g9304 MSGINVSPRPYPVVIPTPTAGQAIKNFSAGDLGMIVFGTAASAAFGLINARKSGMYRTGLLLCGSTGLIGSFFFSLKNSTERLIGMRENIREQRAHGLA* # PASA_UPDATE: g9300.t1, single gene model update, valid-1, status:[pasa:asmbl_8490,status:12], valid-1 NODE_614_length_20146_cov_46.3497 . gene 232 1381 . + . ID=g9300;Name=g9300.t1 NODE_614_length_20146_cov_46.3497 . mRNA 232 1381 . + . ID=g9300.t1;Parent=g9300;Name=g9300.t1 NODE_614_length_20146_cov_46.3497 . five_prime_UTR 232 232 . + . ID=g9300.t1.utr5p1;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . exon 232 392 . + . ID=g9300.t1.exon1;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . CDS 233 392 . + 0 ID=cds.g9300.t1;Parent=g9300.t1;5_prime_partial=true NODE_614_length_20146_cov_46.3497 . exon 492 667 . + . ID=g9300.t1.exon2;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . CDS 492 667 . + 2 ID=cds.g9300.t1;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . exon 849 1381 . + . ID=g9300.t1.exon3;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . CDS 849 1325 . + 0 ID=cds.g9300.t1;Parent=g9300.t1 NODE_614_length_20146_cov_46.3497 . three_prime_UTR 1326 1381 . + . ID=g9300.t1.utr3p1;Parent=g9300.t1 #PROT g9300.t1 g9300 ELCPNQRTTQIVGYCVETAQGKPVSVSIAAELSIYGSVQDFLDYPMAYPISDNGFDGGACMFVRSHPATVAHLRRSIALEYVRSLAFLHRVSTGPYIMCDGRDPRRMLRQFLVFRTGSQWRVKVNDVDRIANAMSGVQEKKHMCFLPRPSNATFFSPEERRYPRGRLHDPKKPWISEQSDVWKMPAVVAMILGITDTKFPTKSATELSRLDSLEVKMLGVIAARCRNANPALRPTSSVLVQAYVQTLVGDGRRLSAAARNKLTQRQELPK* # ORIGINAL: g9303.t1 original gene structure, not modified by PASA NODE_614_length_20146_cov_46.3497 AUGUSTUS gene 13201 17914 . - . ID=g9303;Name=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS mRNA 13201 17914 . - . ID=g9303.t1;Parent=g9303;Name=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 17900 17914 . - . ID=g9303.t1.exon1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 17900 17914 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 17430 17548 . - . ID=g9303.t1.exon2;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 17430 17548 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 17013 17235 . - . ID=g9303.t1.exon3;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 17013 17235 . - 1 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 16669 16737 . - . ID=g9303.t1.exon4;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 16669 16737 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 16115 16472 . - . ID=g9303.t1.exon5;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 16115 16472 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 15704 15930 . - . ID=g9303.t1.exon6;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 15704 15930 . - 2 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 15201 15379 . - . ID=g9303.t1.exon7;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 15201 15379 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 14757 14904 . - . ID=g9303.t1.exon8;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 14757 14904 . - 1 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 14315 14491 . - . ID=g9303.t1.exon9;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 14315 14491 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 14067 14156 . - . ID=g9303.t1.exon10;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 14067 14156 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 13518 13703 . - . ID=g9303.t1.exon11;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 13518 13703 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS exon 13201 13344 . - . ID=g9303.t1.exon12;Parent=g9303.t1 NODE_614_length_20146_cov_46.3497 AUGUSTUS CDS 13201 13344 . - 0 ID=cds.g9303.t1;Parent=g9303.t1 #PROT g9303.t1 g9303 MADGKRLEELKNKGKTAFASGDYVTAVQLFDEIISLDCNNYIVWSNRSAAHASLGHYDRALEDAERVVVLKPDWAKGYSRKACALSFQGRFAEAIAAYGRGLAIEPDNAAMRSGMQEAQAKLDTAAKASARDDREVNPFDEEFSAPDVHELPPPLPLASSRHDTPAAPAPLKRAPDSPLPPRESQPQPSPSLARAASTNSASFSSGLASASASANPPPHHSSQPPPLSSPSHTQQQARQPAPFMPRSDSDDCLGDARDRKAEDIRSLRMDIDSLLAERKALLDELNRRAQPPTPKQTIDAFIRGETSPRMEHHRSLKDKQALLDGAIAANDGNAVMAVILFMKKTLRPAVFLAQIGQRQLAIQMYARYLKARYEWDELGALWRFTKRPVDEGLLLYRRSFYKRTDGAMSDALGDAVRYCAKVDALKWEHSQMFDNASLLERQIKMEIHDGDLEASGTDAFFKKHPRKLRLPQTPLSITLSYASFYHYSAPEDRLSSPVNIRKTFKVSDNFFTHIAIRARSKLRDWDSVEALLTQKGTLFRSTRIKSCIGFEPVVDVLFKHDAPPEVLSKYLSLMSEEELDRKFGTAIRVGCPLVAIEALVETRDREKLVWFRGYVQSNYSNYQGSKIIAVIEDALKNPVGASRS* # PASA_UPDATE: g9302.t1, single gene model update, valid-1, status:[pasa:asmbl_8491,status:12], valid-1 NODE_614_length_20146_cov_46.3497 . gene 9833 12079 . + . ID=g9302;Name=g9302.t1 NODE_614_length_20146_cov_46.3497 . mRNA 9833 12079 . + . ID=g9302.t1;Parent=g9302;Name=g9302.t1 NODE_614_length_20146_cov_46.3497 . five_prime_UTR 9833 9842 . + . ID=g9302.t1.utr5p1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . exon 9833 9919 . + . ID=g9302.t1.exon1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . CDS 9843 9919 . + 0 ID=cds.g9302.t1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . exon 10378 10638 . + . ID=g9302.t1.exon2;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . CDS 10378 10638 . + 1 ID=cds.g9302.t1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . exon 10950 11271 . + . ID=g9302.t1.exon3;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . CDS 10950 11271 . + 1 ID=cds.g9302.t1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . exon 11547 12079 . + . ID=g9302.t1.exon4;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . CDS 11547 11786 . + 0 ID=cds.g9302.t1;Parent=g9302.t1 NODE_614_length_20146_cov_46.3497 . three_prime_UTR 11787 12079 . + . ID=g9302.t1.utr3p1;Parent=g9302.t1 #PROT g9302.t1 g9302 MWNIYPCFYFALLALQYKHLVMAVKSATKFSVAAGPSWLSSVPSKRWGEKFFLFYSPFWMCLCAAVVHFKYYESFDGNAYVLLGAAVALPCVAIPFLFPGTADANLPLAQRYWVKVNVWIGIVGFIGNHFMTHYFYKLLGMRYTVPTDGWELNRVPLCMHLMTHAYFSSYHAMVTPILRRVWTSFRPGVVRLVVSALVVGVLAYVTAFMETWTISSFPHYTFPDRNAMLTVGSAFYALFFVATFPMFPRIDEGESWSIERTAVDALGASMLVLVFFDAWRLSLGPLNIAGTSAEAPYAG* # PASA_UPDATE: g6289.t1, single gene model update, valid-1, status:[pasa:asmbl_6657,status:12], valid-1 NODE_3867_length_2593_cov_35.1632 . gene 127 2485 . + . ID=g6289;Name=g6289.t1 NODE_3867_length_2593_cov_35.1632 . mRNA 127 2485 . + . ID=g6289.t1;Parent=g6289;Name=g6289.t1 NODE_3867_length_2593_cov_35.1632 . exon 127 267 . + . ID=g6289.t1.exon1;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 127 267 . + 0 ID=cds.g6289.t1;Parent=g6289.t1;5_prime_partial=true NODE_3867_length_2593_cov_35.1632 . exon 633 807 . + . ID=g6289.t1.exon2;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 633 807 . + 0 ID=cds.g6289.t1;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . exon 1053 1248 . + . ID=g6289.t1.exon3;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 1053 1248 . + 2 ID=cds.g6289.t1;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . exon 1501 1697 . + . ID=g6289.t1.exon4;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 1501 1697 . + 1 ID=cds.g6289.t1;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . exon 1875 2023 . + . ID=g6289.t1.exon5;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 1875 2023 . + 2 ID=cds.g6289.t1;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . exon 2372 2485 . + . ID=g6289.t1.exon6;Parent=g6289.t1 NODE_3867_length_2593_cov_35.1632 . CDS 2372 2485 . + 0 ID=cds.g6289.t1;Parent=g6289.t1 #PROT g6289.t1 g6289 VKGRQECLLSRPLIDFRYIRRSLAKERTIELMIVKKADLVDVTTAEVASAVPQWHSRGSGKHGSANLTAVPVFHDSSFSVQEKLRVTIVGATNVNAGDVDGLYVRVGVYHGGTQLCPIVKTAEVSPTTDPEWKETLTFDIAIQDIPRAARLCFTLYGMWNTPIAGVSAKESRQNVNVNALLRSQSNETIGQYAMQQASARENRIVLAWVNMTVFDYNNVLRSGSIPLTTWPCGPDEGRDMGNPIGTTVSNPDKSAAPSMSIALPEAPRPIVFPSEDLPVEFGDLIKGPTSEKDAERLRLVIAKDPLSKLTKKEKAMLWKYRCV* # PASA_UPDATE: g1086.t1, single gene model update, valid-1, status:[pasa:asmbl_3494,status:12], valid-1 NODE_2098_length_7749_cov_40.0227 . gene 6274 7668 . - . ID=g1086;Name=g1086.t1 NODE_2098_length_7749_cov_40.0227 . mRNA 6274 7668 . - . ID=g1086.t1;Parent=g1086;Name=g1086.t1 NODE_2098_length_7749_cov_40.0227 . five_prime_UTR 7642 7668 . - . ID=g1086.t1.utr5p1;Parent=g1086.t1 NODE_2098_length_7749_cov_40.0227 . exon 6576 7668 . - . ID=g1086.t1.exon1;Parent=g1086.t1 NODE_2098_length_7749_cov_40.0227 . CDS 6576 7641 . - 0 ID=cds.g1086.t1;Parent=g1086.t1 NODE_2098_length_7749_cov_40.0227 . exon 6274 6439 . - . ID=g1086.t1.exon2;Parent=g1086.t1 NODE_2098_length_7749_cov_40.0227 . CDS 6345 6439 . - 2 ID=cds.g1086.t1;Parent=g1086.t1 NODE_2098_length_7749_cov_40.0227 . three_prime_UTR 6274 6344 . - . ID=g1086.t1.utr3p1;Parent=g1086.t1 #PROT g1086.t1 g1086 MLPSNLGVCFGPTLMRSKEESMAAIMNIKYQNYIVETLIEEYGYFFETAQCDTAGAQPTQSHAQSSPVAPAASGASSEDDDAQQRPQAPGHAPTTTTGHSQAPPRRPAPPSSKPPAPPPKKVRPISSTLAALPTLPTTHDHPPPRAAQQSAAVAPESPPPAISGGSGGSQASAPVVPTGKPIAVRRTVPLPAAPSTQKSGGGATDSAPQSPTPATAHSAADSAPPSRPGIPQRPMPPSRPVAAAAAAFSQPRKSTEDVKKEPPSRPKAAPRVWPPPAQSSSLGDEDTPGLVKESKGLAAEKPLPARPRSPAPPARPKPPTGGGGGPAGKRAVALYDCDGDDDTELSFSLNTTLVDVRESEEPGWLEGTIEGTTTRGLFPANYVRYL* # ORIGINAL: g1085.t1 original gene structure, not modified by PASA NODE_2098_length_7749_cov_40.0227 AUGUSTUS gene 92 5169 . - . ID=g1085;Name=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS mRNA 92 5169 . - . ID=g1085.t1;Parent=g1085;Name=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 4968 5169 . - . ID=g1085.t1.exon1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 4968 5169 . - 0 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 4407 4585 . - . ID=g1085.t1.exon2;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 4407 4585 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 4119 4180 . - . ID=g1085.t1.exon3;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 4119 4180 . - 0 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 3462 4002 . - . ID=g1085.t1.exon4;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 3462 4002 . - 1 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 3033 3183 . - . ID=g1085.t1.exon5;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 3033 3183 . - 0 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 2635 2820 . - . ID=g1085.t1.exon6;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 2635 2820 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 2210 2345 . - . ID=g1085.t1.exon7;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 2210 2345 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 1909 1958 . - . ID=g1085.t1.exon8;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 1909 1958 . - 1 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 1502 1660 . - . ID=g1085.t1.exon9;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 1502 1660 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 967 1203 . - . ID=g1085.t1.exon10;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 967 1203 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 711 772 . - . ID=g1085.t1.exon11;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 711 772 . - 2 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 378 524 . - . ID=g1085.t1.exon12;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 378 524 . - 0 ID=cds.g1085.t1;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS exon 92 194 . - . ID=g1085.t1.exon13;Parent=g1085.t1 NODE_2098_length_7749_cov_40.0227 AUGUSTUS CDS 92 194 . - 0 ID=cds.g1085.t1;Parent=g1085.t1 #PROT g1085.t1 g1085 MGRKGVKTRKNVKQEVFELSEGHDPHRIDPAGTGESSNVPPHVAFGAEAARTFHTLTVDEAIIALRSDGARGLSGDEAKRRLAQFGYNELAGKSGPSPLRILVSNFFNAMNFILLIAFGVSVGVGDYAEATVVAIVIVTNTIIGFFQEYRSERTMEALRKLSSPTARILRDGELAIDLAPEIVPGDIIYLEEGDQVAADIRLLTSVNLEIDEILLTGESMPVKKSPTVLPNPDVPLGDRTNLAYKNTIVTKGRGHGVVIATGMSTEIGLIAASVSSKGSGAQKTHLQRRMERLMFVLLGVACVLAFIVFATNRFSGNNQVILYALAVAIAILPEGLPAVVTVTMAVGVRKMARQKAIVRKLASLETLGEVTNICSDKTGTITVGKMVATNFVLAAHAYSITGAGLEPVGTILIDPSSSGSGAGVGAGGHVVDYNAMPDHLSKALVTCALCNTSSIIFQDDRWQSVGDPTEVALQVLATKAGLGKPSLSPAMFEFVSEQPFDAVLKRMTVVYRALAGNAHAPAGSFGVFMKGSIEAVTACATKCVARDGSIVPITKERVDEILNEMEGLASRGLRVLALAYRVIPQDDPAAAIAAQPDDSHRTEIEADMTVVGIVGMYDPPRADSAEAVERCHRAGICVHMATGDHPKTAAAIARQVNIITAEDERLPNVVMVATEFDRMSDEELDALPELPRVLARCSPKSKVKLIEALHRRGKHVAMTGDGVNDAPAVKNADVGIAM # PASA_UPDATE: g6305.t1, single gene model update, valid-1, status:[pasa:asmbl_5931,status:12], valid-1 NODE_3360_length_3649_cov_31.9583 . gene 90 3022 . + . ID=g6305;Name=g6305.t1 NODE_3360_length_3649_cov_31.9583 . mRNA 90 3022 . + . ID=g6305.t1;Parent=g6305;Name=g6305.t1 NODE_3360_length_3649_cov_31.9583 . five_prime_UTR 90 114 . + . ID=g6305.t1.utr5p1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 90 216 . + . ID=g6305.t1.exon1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 115 216 . + 0 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 677 803 . + . ID=g6305.t1.exon2;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 677 803 . + 0 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 1153 1255 . + . ID=g6305.t1.exon3;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 1153 1255 . + 2 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 1819 1987 . + . ID=g6305.t1.exon4;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 1819 1987 . + 1 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 2349 2497 . + . ID=g6305.t1.exon5;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 2349 2497 . + 0 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . exon 2723 3022 . + . ID=g6305.t1.exon6;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . CDS 2723 2834 . + 1 ID=cds.g6305.t1;Parent=g6305.t1 NODE_3360_length_3649_cov_31.9583 . three_prime_UTR 2835 3022 . + . ID=g6305.t1.utr3p1;Parent=g6305.t1 #PROT g6305.t1 g6305 MHSLLRQFFRQWGDSELQIVNLGAGFDTMFWQLHTEHPHARFFELDFDEVVTKKCSAVHGSKLLKAVFDGDSLFKNTGVSITSKRYHLLSADLRSLESIEAALVKAGINTSLPTMFYSECVLIYLPPASAEAILRWAASAFQNAAFASYEQIKPNDPFGVTMLRNLETRRCPLLGIHACPDVEGHVRRYRECGWNAASGADMYRIYTKLLDRTQVARIEKIEVLDELEEWQLIMEHYCITWAAKGDIASHFGL* # ORIGINAL: g3038.t1 original gene structure, not modified by PASA NODE_5096_length_1025_cov_48.1316_potentialcontaminant AUGUSTUS gene 2 247 . + . ID=g3038;Name=g3038.t1 NODE_5096_length_1025_cov_48.1316_potentialcontaminant AUGUSTUS mRNA 2 247 . + . ID=g3038.t1;Parent=g3038;Name=g3038.t1 NODE_5096_length_1025_cov_48.1316_potentialcontaminant AUGUSTUS exon 2 247 . + . ID=g3038.t1.exon1;Parent=g3038.t1 NODE_5096_length_1025_cov_48.1316_potentialcontaminant AUGUSTUS CDS 2 247 . + 0 ID=cds.g3038.t1;Parent=g3038.t1 #PROT g3038.t1 g3038 AGCFLGNGGSMRHHTPMYAVTADNVCNILDQCNGAGMDGQLQKPVSISDVENLFTSLGFDIRRTANAPAAGGAVSQPPMGT* # PASA_UPDATE: g1173.t1, single gene model update, valid-1, status:[pasa:asmbl_3846,status:12], valid-1 NODE_2236_length_7121_cov_39.0349 . gene 100 6813 . + . ID=g1173;Name=g1173.t1 NODE_2236_length_7121_cov_39.0349 . mRNA 100 6813 . + . ID=g1173.t1;Parent=g1173;Name=g1173.t1 NODE_2236_length_7121_cov_39.0349 . five_prime_UTR 100 100 . + . ID=g1173.t1.utr5p1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 100 204 . + . ID=g1173.t1.exon1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 101 204 . + 0 ID=cds.g1173.t1;Parent=g1173.t1;5_prime_partial=true NODE_2236_length_7121_cov_39.0349 . exon 388 453 . + . ID=g1173.t1.exon2;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 388 453 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 772 843 . + . ID=g1173.t1.exon3;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 772 843 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 1204 1275 . + . ID=g1173.t1.exon4;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 1204 1275 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 1603 1674 . + . ID=g1173.t1.exon5;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 1603 1674 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 1917 2373 . + . ID=g1173.t1.exon6;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 1917 2373 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 2567 2618 . + . ID=g1173.t1.exon7;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 2567 2618 . + 0 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 2933 2987 . + . ID=g1173.t1.exon8;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 2933 2987 . + 2 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 3158 4305 . + . ID=g1173.t1.exon9;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 3158 4305 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 4692 4774 . + . ID=g1173.t1.exon10;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 4692 4774 . + 2 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 5040 5101 . + . ID=g1173.t1.exon11;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 5040 5101 . + 0 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 5400 5492 . + . ID=g1173.t1.exon12;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 5400 5492 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 5651 5807 . + . ID=g1173.t1.exon13;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 5651 5807 . + 1 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 6086 6163 . + . ID=g1173.t1.exon14;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 6086 6163 . + 0 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 6423 6452 . + . ID=g1173.t1.exon15;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 6423 6452 . + 0 ID=cds.g1173.t1;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . exon 6721 6813 . + . ID=g1173.t1.exon16;Parent=g1173.t1 NODE_2236_length_7121_cov_39.0349 . CDS 6721 6813 . + 0 ID=cds.g1173.t1;Parent=g1173.t1 #PROT g1173.t1 g1173 RFSGNNLGGRLNMSDPFSEDLPPYMFNGIIVSTTLDLSLNGIRRIRNSLRGVQSPYIMLGLNNISYIHERAFEDNGVLYYLGMQDNALTEIPAQLFAKKPNLGYLYFQNNQISRIEDGALSSLPSLAQLSLNGNKLASLPDYFMITHDASKLIQVPEDVYVDLTGNPGLSAGNAGNVYVGSAKCPPLRYGSAVYDVCVFGTCQGCACWNGCFCKAGRKGTNCDTPCASNGMLPVAMANVTVADRFGTGCLGRCTDCVNSDYCDPVIGCHCLSGWEGPNCNKEILVSESAAAAALQLVEVTTTTATLTWESLDCPNCEYRLKRTQVIVTNVCQSKFSHPDDPDCYVQSEASEFYLMPYFSDSKVRVDTGLFPNTNYRYRLQVRRNTTSMYMKTNFTAITTTVARIPPPVKISAAFEIHPGVIRLGWETVTDTNGFVIRYEVYRDGLTVAETPTNSSQSPTLDRNAASPVPSSGVASMSSRQTPSPAAAGAVMSIDAFSPAANGTSAAASMSSRMASVTPSPGTNGSANGTDVNPPVPARLSNLKLLAAVGRDVRYFDDTTANKTIKYTYVVLAVVDGSTENAIVNLKNLFPLDNGTLADGVISGVALAIPQDAPSPSLAAISAAGPGDSSKTIAIAVSVPIVVVLIACVALLRVTYVKMRDKRHKRLHEDFLARHAGATDEFGGLTLDKQSIILQDELGAGEFGIVYRARVAAKDGKIRVCAAKTMREGSSIQDREEFIAEATIMKNLSHPHVMALVAVSIQEEPMMLIFEYIPHGNLKRFLQMIPDEQQRLPVTIRLLMQFSHQLAVGMDYLASSGIVHRDLAARNVMVGQDAFGEYVVKVADFGLSRNIQGDYYRKVKKGGKIAVKWMAPECLRRKVFLSKSDVWSFGVVLWEVSN* # ORIGINAL: g8015.t1 original gene structure, not modified by PASA NODE_2880_length_4855_cov_22.0293 AUGUSTUS gene 44 1945 . - . ID=g8015;Name=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS mRNA 44 1945 . - . ID=g8015.t1;Parent=g8015;Name=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS exon 1685 1945 . - . ID=g8015.t1.exon1;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS CDS 1685 1945 . - 0 ID=cds.g8015.t1;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS exon 1050 1301 . - . ID=g8015.t1.exon2;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS CDS 1050 1301 . - 0 ID=cds.g8015.t1;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS exon 609 679 . - . ID=g8015.t1.exon3;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS CDS 609 679 . - 0 ID=cds.g8015.t1;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS exon 44 208 . - . ID=g8015.t1.exon4;Parent=g8015.t1 NODE_2880_length_4855_cov_22.0293 AUGUSTUS CDS 44 208 . - 1 ID=cds.g8015.t1;Parent=g8015.t1 #PROT g8015.t1 g8015 MGSVCSFADLRQPSAGGGRQRRRHVGISPASHTTTVALALILCVVASLLFGPGVAVDITYRLREDLVCPAEPSGNTTIRIGFLFSNDHPIRVERYTHFRLALEHIANRTDGRWDDVLVGYNLAALENTTNCKQDKALDAAWYQAKCGAVAVVGDACSISSQGMQLLLKNMKVPQIGYSATSTELSDKSLYSFFVRTVPADTMASRALAAICVSFGWKSVAVLSSADSYGVGLAYEFSAEALRLGVNVAL # PASA_UPDATE: g13666.t1, single gene model update, valid-1, status:[pasa:asmbl_10067,status:12], valid-1 NODE_945_length_15627_cov_42.5047 . gene 14879 15627 . - . ID=g13666;Name=g13666.t1 NODE_945_length_15627_cov_42.5047 . mRNA 14879 15627 . - . ID=g13666.t1;Parent=g13666;Name=g13666.t1 NODE_945_length_15627_cov_42.5047 . exon 14879 15627 . - . ID=g13666.t1.exon1;Parent=g13666.t1 NODE_945_length_15627_cov_42.5047 . CDS 15163 15627 . - 0 ID=cds.g13666.t1;Parent=g13666.t1;5_prime_partial=true NODE_945_length_15627_cov_42.5047 . three_prime_UTR 14879 15162 . - . ID=g13666.t1.utr3p1;Parent=g13666.t1 #PROT g13666.t1 g13666 PAPASTPTPTPTPTPTAATPAPAPEVASAAPAEAKTESAPAATAPSNFEQDEAPEVDERVQMESEQLFTDLFYRTSSVSGPSASAVAETDSLALPSGGAMQRSWSGTGLAKAMRQSLYVAQQQNPDKKDDIGSAFNALDEMLGDLSKQLEGLDF* # ORIGINAL: g13665.t1 original gene structure, not modified by PASA NODE_945_length_15627_cov_42.5047 AUGUSTUS gene 11541 14521 . + . ID=g13665;Name=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS mRNA 11541 14521 . + . ID=g13665.t1;Parent=g13665;Name=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 11541 11674 . + . ID=g13665.t1.exon1;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 11541 11674 . + 0 ID=cds.g13665.t1;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 11811 11883 . + . ID=g13665.t1.exon2;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 11811 11883 . + 1 ID=cds.g13665.t1;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 12047 12322 . + . ID=g13665.t1.exon3;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 12047 12322 . + 0 ID=cds.g13665.t1;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 12665 14521 . + . ID=g13665.t1.exon4;Parent=g13665.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 12665 14521 . + 0 ID=cds.g13665.t1;Parent=g13665.t1 #PROT g13665.t1 g13665 MSTSEMHWRHLSSGGAQATATSRMPLSTRHAPNNPQTPSSLSGKMTLSALTKSPEFKKEVLSSLMHAKENADLASNAVVKATPAPSSSSQVRTRKIQPRNGAPVTLKTSWNSNNSSIIAPSPFTHTTTMRETVTATTTTVRYYPKSAHFGDSSDVKENEVPHFHPSDVDQQARELPLTSSRSSSISNFSVDMTDFISRRVGGYCPPTAFNSPSASLRMPPSSQSSVEHARTHASHAVPAQFQPLDGILVKGGEGETRSATDGSFDFCDIVENGAEDDDDDDEDTGAVESAADFFTRSAKHGAAPTAIRIRVSGTIAESARVADADTNDSLLLNDPGNRRDCAAAYGDAAETREEAVESQFELHEQPTEDGCMEPDDDGRHSDPLEATWRLSVSDLAPSNVAMAHDTLSPASDHVTFPAAGLNNRRNVDGIVGCDAPPVLNYSDHSNAALASPIVSREAASGDDSEQPPTSTSPFDRGVLNRIVESLVSEHCAPLLARMSEMEETIDAVTRERDALRRALELVRANVEMTDEALFATLAFPLTKDQPSRAAEIGAESSPSVVANATSVAPVYATKQFAPSSPAPTATEESNSNQSPSSVSPAVHKHEHAHTSSPPDHAGMSLRALLNETTESMDSDSLSRLGEHLGLGVERVSMETTLRFALDVSGGSICDSANDAGYDTCTTEAPHCPAAGSLATDVSCVATVETSAVSISRSTEKSMTDGSQFLLQENAYLSEQLASETAKRRMLAAKLSAVRYIALSSSELQALAAIDHVGLDGDEE* # PASA_UPDATE: g13660.t1, single gene model update, valid-1, status:[pasa:asmbl_10065,status:12], valid-1 NODE_945_length_15627_cov_42.5047 . gene 181 1886 . + . ID=g13660;Name=g13660.t1 NODE_945_length_15627_cov_42.5047 . mRNA 181 1886 . + . ID=g13660.t1;Parent=g13660;Name=g13660.t1 NODE_945_length_15627_cov_42.5047 . five_prime_UTR 181 182 . + . ID=g13660.t1.utr5p1;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . exon 181 281 . + . ID=g13660.t1.exon1;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . CDS 183 281 . + 0 ID=cds.g13660.t1;Parent=g13660.t1;5_prime_partial=true NODE_945_length_15627_cov_42.5047 . exon 487 591 . + . ID=g13660.t1.exon2;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . CDS 487 591 . + 0 ID=cds.g13660.t1;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . exon 836 880 . + . ID=g13660.t1.exon3;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . CDS 836 880 . + 0 ID=cds.g13660.t1;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . exon 1066 1886 . + . ID=g13660.t1.exon4;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . CDS 1066 1548 . + 0 ID=cds.g13660.t1;Parent=g13660.t1 NODE_945_length_15627_cov_42.5047 . three_prime_UTR 1549 1886 . + . ID=g13660.t1.utr3p1;Parent=g13660.t1 #PROT g13660.t1 g13660 LIIRAIHEYEPEDPTTTPPYFVPFENIFAKIQPVWGSLRRRDGTVYATDCRRACQASLSNNPAVPIFKRDSKVRTSWQLGKGGLYRLEVLKKHWDAQAATADDSDAVRGIAQTRQQNGADSPDEEGDADGPNINSNNVNNNINGRTASGNRSGSVSPVLNGGGIAHDEVIGGFHNCIRGNGMNGSDGGDANVGGDDERDPNGDDSGLGSSFNSRKKRGRELDDFEGEEEVDVRQKSRARSFRN* # ORIGINAL: g13661.t1 original gene structure, not modified by PASA NODE_945_length_15627_cov_42.5047 AUGUSTUS gene 2313 3681 . + . ID=g13661;Name=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS mRNA 2313 3681 . + . ID=g13661.t1;Parent=g13661;Name=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 2313 2437 . + . ID=g13661.t1.exon1;Parent=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 2313 2437 . + 0 ID=cds.g13661.t1;Parent=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 2654 2802 . + . ID=g13661.t1.exon2;Parent=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 2654 2802 . + 1 ID=cds.g13661.t1;Parent=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 3212 3681 . + . ID=g13661.t1.exon3;Parent=g13661.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 3212 3681 . + 2 ID=cds.g13661.t1;Parent=g13661.t1 #PROT g13661.t1 g13661 MDVKFILEERLRELASVGDASQLSVLLSQGVDINARNQMNGWTALHWAAKRNHGTIVELLLKSGADPTVCNSMGKTAADLASSEAVAALFGDEEALPVPMAPPRPAFVADAPTRPIPPVAQPEVGVTHMSRAESASQERASVVAVDSPLIQTRASPSNSPYSLNPLGVAPGAVVLKLRIADCGDGDFIEAELPRCSGFAGLVRLFSGELSVDPARISKVRKLPNTVVRDDRDIARLLHFQELEVVVL* # ORIGINAL: g13664.t1 original gene structure, not modified by PASA NODE_945_length_15627_cov_42.5047 AUGUSTUS gene 7175 10042 . - . ID=g13664;Name=g13664.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS mRNA 7175 10042 . - . ID=g13664.t1;Parent=g13664;Name=g13664.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 7175 10042 . - . ID=g13664.t1.exon1;Parent=g13664.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 7175 10042 . - 0 ID=cds.g13664.t1;Parent=g13664.t1 #PROT g13664.t1 g13664 MVTTLLPPTGEPTTTLVVDLLTAADVPMSDLYGSVTVDKTELPANVADGVVCLLDCSGSIGSHGPAVSACIRKFIDRNPELTSCKHQLRTVLWATSAAVHTGFHDTHSNGGGTNPSEGVAALYKMRDGPANPVVILFTDGDIGRAEMQAVATLLTPNSIHTLVAFIMAEVPAQRVSVIMPFVAGSKRAVVYALPTRDLAKMSSGEINPAAIHRQNFESGASLVSAVDITLCARIPQGACVVGQEGDTLWYVNAIRLTESSMTPTQMVDRNLQIAVLDCLRSFQCRGDARSVQRLRAWFDRHTTRSDFRAALSTHMEPTRVATARATLHTMLGRVTRQLRENEGRRDAGLDECVRKASRDVARAEAETRGEIQEHLVRWVTLRQFVSLFNERLRTEDTVAVLQTGLQSMGIAADLASKFKRTTTVVDDADTTDVGAYTAECTICTETLPACLLISGVPGEQIDRKTLESHRFAGPQIFPWLREGVLPGLYCRACAGWLVANGRECPLTRRPVHAVCRLLCGIDGADKGDDRRGIVSVAQAESNRLAMRHELAAALVPIDSPVRPHVSRLGGLLLTAIADPTAVPHLSENPLRDAIEFLARNLATLSSDRPIEEMAEAVTGDFFGATVNCDANVLVVTAGLLLRGDYLPSPPDKDGAVRRLFRAAILRTVVLRARELWLLEQQHGTQSAASIAGADASVIRAANMYRNSYCNLRKLMRKGVCQYPHFHIKRLLQLVACPDVPHMGPIDGARELHYWRKLSIKAPFAFDDEERAMLGSLFPGAGFDSTAASAVASTTTVGMPLGVFRLDLMEELVQWDGELAAEALGRRAAGLMNGTYALEYARRNLGINSANELAVWAFEGAAEDVTMSALAIAEGTALSHVRGRPFEKLVLEMRDEEASGIAAEVIKAMGYAPASVDTNRLGEAWSHVAGMLAEHVVFAKGVIAGVVGSSIVPHAS* # ORIGINAL: g13662.t1 original gene structure, not modified by PASA NODE_945_length_15627_cov_42.5047 AUGUSTUS gene 4020 4958 . - . ID=g13662;Name=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS mRNA 4020 4958 . - . ID=g13662.t1;Parent=g13662;Name=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 4827 4958 . - . ID=g13662.t1.exon1;Parent=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 4827 4958 . - 0 ID=cds.g13662.t1;Parent=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 4442 4593 . - . ID=g13662.t1.exon2;Parent=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 4442 4593 . - 0 ID=cds.g13662.t1;Parent=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 4020 4185 . - . ID=g13662.t1.exon3;Parent=g13662.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 4020 4185 . - 1 ID=cds.g13662.t1;Parent=g13662.t1 #PROT g13662.t1 g13662 MSYLLRSLATKRDVDDAIKSTEDKVVVLRFGRDTDAVCMQLDDILLRAEAKVANMASIFTVDVDAVPIYVQYFDISLIPATIFFFNAQHMKVDYGTPDHTKFIGSFFDKQDFMDLIEVIYRGAMRGKVIVDSPIERSRIPHYDLLFKGY* # ORIGINAL: g13663.t1 original gene structure, not modified by PASA NODE_945_length_15627_cov_42.5047 AUGUSTUS gene 5620 6805 . + . ID=g13663;Name=g13663.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS mRNA 5620 6805 . + . ID=g13663.t1;Parent=g13663;Name=g13663.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 5620 6083 . + . ID=g13663.t1.exon1;Parent=g13663.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 5620 6083 . + 0 ID=cds.g13663.t1;Parent=g13663.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS exon 6280 6805 . + . ID=g13663.t1.exon2;Parent=g13663.t1 NODE_945_length_15627_cov_42.5047 AUGUSTUS CDS 6280 6805 . + 1 ID=cds.g13663.t1;Parent=g13663.t1 #PROT g13663.t1 g13663 MDGGGNDFLVDGVPTVSPTRLSTTGGMQTWTILDGLVHSDIHTIEIVKLTEASYHIFDDPHLVLGVVVIESFVLDGGARLLDAHMRHAAHAPFGLYHRRMGRQIVFLGDSDTNGFGCDGVYTATACDFKAYQNCALGFASLLARHFGARYDIEAWTGKGIVQNAVGVIPTDNTTMQAYWNRTIAVDPSLSSTWDFSRYASSLQAPLVIIYLGSNDFHNVPPAAADAFEDAYSKILRGVVKSYSEAHVHPTIVSICGGRGTAALPCALVKKVSDAFARGAYPSSHYIGIPGDGLLDYPSDYGCLGHRNAVGQMKVAQYLAPIVGDIMGWA* # ORIGINAL: g8606.t1 original gene structure, not modified by PASA NODE_1408_length_11497_cov_40.7622 AUGUSTUS gene 343 1499 . - . ID=g8606;Name=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS mRNA 343 1499 . - . ID=g8606.t1;Parent=g8606;Name=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 1160 1499 . - . ID=g8606.t1.exon1;Parent=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 1160 1499 . - 0 ID=cds.g8606.t1;Parent=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 805 1002 . - . ID=g8606.t1.exon2;Parent=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 805 1002 . - 2 ID=cds.g8606.t1;Parent=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 343 566 . - . ID=g8606.t1.exon3;Parent=g8606.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 343 566 . - 2 ID=cds.g8606.t1;Parent=g8606.t1 #PROT g8606.t1 g8606 MAPVTRRSLKAEKAEKIEYEFGGPIGALALMVGLPAVVYSLFFFCSADGCPRIPPVVPETLSSLKWDDFITWDSQLVFYGWVAFQALLEIIMPGPVVEGVVLVDGTRLKYPMNAFASVAFTTAALGLGTYLGYVPLFYIYDNYLRLLTASVIFGFIGGIFLHLYALRPGKKMLAKGGQSGNWIYDLFIGHELNPRIGNFDLKSFFELRPGLIGWVIIDLAMAAKQYQDLGYVTNSLILVCAFQGFYVFDALFHE # ORIGINAL: g8608.t1 original gene structure, not modified by PASA NODE_1408_length_11497_cov_40.7622 AUGUSTUS gene 3780 5782 . - . ID=g8608;Name=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS mRNA 3780 5782 . - . ID=g8608.t1;Parent=g8608;Name=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 5673 5782 . - . ID=g8608.t1.exon1;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 5673 5782 . - 0 ID=cds.g8608.t1;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 5332 5530 . - . ID=g8608.t1.exon2;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 5332 5530 . - 1 ID=cds.g8608.t1;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 4873 5102 . - . ID=g8608.t1.exon3;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 4873 5102 . - 0 ID=cds.g8608.t1;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 4322 4663 . - . ID=g8608.t1.exon4;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 4322 4663 . - 1 ID=cds.g8608.t1;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS exon 3780 3996 . - . ID=g8608.t1.exon5;Parent=g8608.t1 NODE_1408_length_11497_cov_40.7622 AUGUSTUS CDS 3780 3996 . - 1 ID=cds.g8608.t1;Parent=g8608.t1 #PROT g8608.t1 g8608 MHPRLVFYGATAVKALWRRLPDERRASVLKVVLGEGKGRYVRLTLYTGILAGGMGFYYTTHLEDAPVTGRMRFLALSRSDESLMSELAYAEVSETHKGQFFPPHHPSRVRVETVAQRLIHVADPLLEHAWELHVIDDPTENAFVLPGGKIFVYDGMLKLLDSDDKLAIVLGHEMAHAVARHAAEQMSFRKALFAFDAILTTVAAFLVPVELFAPQVERILHTLRDTFIVPLLFAYPYSRMLESEADRIGLLYAAKACYNPSAGPVVWQEMAARDPAGATKLGEFFSTHPAHDSRIEDLRGWLAEAEEERKKSHCRVVDTHMSRFRQLGALLRKTGTMLHITSDDTNASGGAVTSPPRPDLTPSKA* # PASA_UPDATE: g8609.t1, single gene model update, valid-1, status:[pasa:asmbl_1495,status:12], valid-1 NODE_1408_length_11497_cov_40.7622 . gene 6722 11345 . + . ID=g8609;Name=g8609.t1 NODE_1408_length_11497_cov_40.7622 . mRNA 6722 11345 . + . ID=g8609.t1;Parent=g8609;Name=g8609.t1 NODE_1408_length_11497_cov_40.7622 . five_prime_UTR 6722 6854 . + . ID=g8609.t1.utr5p1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 6722 7045 . + . ID=g8609.t1.exon1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 6855 7045 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 7427 7502 . + . ID=g8609.t1.exon2;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 7427 7502 . + 1 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 7811 8021 . + . ID=g8609.t1.exon3;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 7811 8021 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 8490 8650 . + . ID=g8609.t1.exon4;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 8490 8650 . + 2 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 8876 9045 . + . ID=g8609.t1.exon5;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 8876 9045 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 9325 9610 . + . ID=g8609.t1.exon6;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 9325 9610 . + 1 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 9853 10089 . + . ID=g8609.t1.exon7;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 9853 10089 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 10494 10727 . + . ID=g8609.t1.exon8;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 10494 10727 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 10933 11031 . + . ID=g8609.t1.exon9;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 10933 11031 . + 0 ID=cds.g8609.t1;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . exon 11226 11345 . + . ID=g8609.t1.exon10;Parent=g8609.t1 NODE_1408_length_11497_cov_40.7622 . CDS 11226 11345 . + 0 ID=cds.g8609.t1;Parent=g8609.t1;3_prime_partial=true #PROT g8609.t1 g8609 MGPKQAPKGKGIAPPGQGGPGGKPAKAQYETTKKKAVGVEDMTLLAKVSNEMITDNIQLRFENRLIYNYIGHVLISVNPYQDLGIYSQDYLEAYVGKNRIEMPPHIFAIAEAAYRQMMAYTENQCVIISGESGAGKTEAAKRIMQYIAAVSGGGRETEHVKEMVNATNPILEGFGNAKTLRNNNSSRFGKYFEIEFNNGAPHGGIVHNYLLEKSRVTSQIQGERNFHIFYQMCAGMEGEMRDSFSIQSAADYVYLSQANCLTVDGIDDVSEWADTSRALDVIGVTPQEKYDLFRLLSGILWLGNVVFGEQKDAAFVRDPSILEFVAGLLEISTDIFNNCICQRMVETQRGGKRGTIYHVPLNQSQAAAVRDALSKAIYNRIFDWLVVRINNAIATGQEKKMVIGVLDIYGFEIFDRNGFEQMCINYVNEKLQQIFIELTLKSEQEEYEREGIKWTAIPFFDNKIVCELIEGKKPPGIFAVLDDACATAHADPDAADRSLMQRLGTLQSNKHFHLGGSNFIIKHYAGDVTYDGAGLTEKNKDQLVIDLLECLKATKNDFLLNLFPEQVERGTTKKPTTAGFKIKSSCNALVAALMQ # PASA_UPDATE: g8607.t1, single gene model update, valid-1, status:[pasa:asmbl_1494,status:12], valid-1 NODE_1408_length_11497_cov_40.7622 . gene 1924 3159 . + . ID=g8607;Name=g8607.t1 NODE_1408_length_11497_cov_40.7622 . mRNA 1924 3159 . + . ID=g8607.t1;Parent=g8607;Name=g8607.t1 NODE_1408_length_11497_cov_40.7622 . five_prime_UTR 1924 1984 . + . ID=g8607.t1.utr5p1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . exon 1924 2037 . + . ID=g8607.t1.exon1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . CDS 1985 2037 . + 0 ID=cds.g8607.t1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . exon 2158 2263 . + . ID=g8607.t1.exon2;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . CDS 2158 2263 . + 1 ID=cds.g8607.t1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . exon 2561 2647 . + . ID=g8607.t1.exon3;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . CDS 2561 2647 . + 0 ID=cds.g8607.t1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . exon 2974 3159 . + . ID=g8607.t1.exon4;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . CDS 2974 3048 . + 0 ID=cds.g8607.t1;Parent=g8607.t1 NODE_1408_length_11497_cov_40.7622 . three_prime_UTR 3049 3159 . + . ID=g8607.t1.utr3p1;Parent=g8607.t1 #PROT g8607.t1 g8607 MSAEVLRALKVKTGVVKRIHKEWLMYQVEADKQQVRIDKMRANDADEYDIKKQIEVLNESKMMIPDCKKRLEVAQADLSSIVNNEKGLEQTEEYKAAVAILQDTAN* # ORIGINAL: g696.t1 original gene structure, not modified by PASA NODE_1453_length_11200_cov_41.4374 AUGUSTUS gene 5533 6783 . + . ID=g696;Name=g696.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS mRNA 5533 6783 . + . ID=g696.t1;Parent=g696;Name=g696.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 5533 6783 . + . ID=g696.t1.exon1;Parent=g696.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 5533 6783 . + 0 ID=cds.g696.t1;Parent=g696.t1 #PROT g696.t1 g696 MDLAIADSTTQTCIEIIVPKSTVEDEKLLQKHISSVLKKHFSLVTRHREYSTTAGLTEEQKSAGATLICIPLQTEAGAGHTVELVRKAAVRLLESTLCIKRIGGSICAAMAPMADDNTDRLRVITDLEESAMSRLQETKWYKTNFAVGTTRTKRALVCIDSPSRSIIVAGIDPADAQEVEKRIRIEIGGGGEVLYTEFGGRADFAIVRSTLSAKLIEIVVPSKTVKHLQGTNDKNIDKCLSALGLVRDHVEISRSMLTDEQRKANGILVRIHLKYDDGAMKNLRAAAVRLLSRSLKYAARDHDPNRTEFPVNFNGPLIVLSVSQSTAQWIIGKYQKHINAIRYEWKDSALIAILDGRDGSPTARAAAVDGTSPRDDEPVRVIIAGISYNVAGNVAAQIRQKEKYLINRETNDTWGN* # ORIGINAL: g694.t1 original gene structure, not modified by PASA NODE_1453_length_11200_cov_41.4374 AUGUSTUS gene 384 3012 . - . ID=g694;Name=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS mRNA 384 3012 . - . ID=g694.t1;Parent=g694;Name=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 2757 3012 . - . ID=g694.t1.exon1;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 2757 3012 . - 0 ID=cds.g694.t1;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 2061 2228 . - . ID=g694.t1.exon2;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 2061 2228 . - 2 ID=cds.g694.t1;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 846 1536 . - . ID=g694.t1.exon3;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 846 1536 . - 2 ID=cds.g694.t1;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 384 532 . - . ID=g694.t1.exon4;Parent=g694.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 384 532 . - 1 ID=cds.g694.t1;Parent=g694.t1 #PROT g694.t1 g694 MANTTRESTVSDNTWDGRMHNENASVPNNAVGTRSGRRLRAPIGGRQSVRSYPCRNRGQRRALLGLTLALSLISTLHPFRVEGFQTRAVSKALQKTAMPSGDASAPTAADDYFLFTEALWVGTAKGALGSVLAESFEADSSVFKIPQLQSNAAAKASCADAFSMNMYTPIDNSDKWIQMPVRLSVSFSTQSAQPTDPRVFHIITPLGDNTAPSSRQYYAFGCDSPLSNYTVRYDSASNAKSSSHAQQTGPSFSGGVCVPTIADMTALLSGDVNAFVVRGTPFAVIPNRKYTLSTVFYSNRVLMAVTYSDSSVTPSTMVRAASLNATLPIAPDANFPTMPPFRGFGIAAGLSLDGNVTCLSDFVMATLGPVDRFVSGESTFSGYSAEYVDTFEAPSNTPDAQDDVFGTPALGQQWLTWQLND # ORIGINAL: g695.t1 original gene structure, not modified by PASA NODE_1453_length_11200_cov_41.4374 AUGUSTUS gene 4667 5491 . + . ID=g695;Name=g695.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS mRNA 4667 5491 . + . ID=g695.t1;Parent=g695;Name=g695.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS exon 4667 5491 . + . ID=g695.t1.exon1;Parent=g695.t1 NODE_1453_length_11200_cov_41.4374 AUGUSTUS CDS 4667 5491 . + 0 ID=cds.g695.t1;Parent=g695.t1 #PROT g695.t1 g695 MSAVASLLACTIRYVEAAFGGINLETALADRGKLRVLKWTPASINRLVASERYKKGWYQFVGEQTSTEVRALVHVDVSSCSVTIAGMEARDTDKVEEELMHTIGPDKPRRFYEFGGLVDLAISSNITRSYIECIHPASIPGNVTDKLVEKALARRALKSTIRKFAKESLGEGLRLICIALDLPARNVGVCMCVAAIILTKAFKYAFIHTDSLQLCHDNGRHQPRDRVHVVQTYTFDVDDGTDPQRALVLVNESSQSYSVTIAGVDAIDVQMSRE* # PASA_UPDATE: g697.t1, single gene model update, valid-1, status:[pasa:asmbl_1648,status:12], valid-1 NODE_1453_length_11200_cov_41.4374 . gene 7570 11023 . - . ID=g697;Name=g697.t1 NODE_1453_length_11200_cov_41.4374 . mRNA 7570 11023 . - . ID=g697.t1;Parent=g697;Name=g697.t1 NODE_1453_length_11200_cov_41.4374 . five_prime_UTR 10944 11023 . - . ID=g697.t1.utr5p1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 10882 11023 . - . ID=g697.t1.exon1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 10882 10943 . - 0 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 10543 10650 . - . ID=g697.t1.exon2;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 10543 10650 . - 1 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 10091 10235 . - . ID=g697.t1.exon3;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 10091 10235 . - 1 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 9699 9812 . - . ID=g697.t1.exon4;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 9699 9812 . - 0 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 9366 9469 . - . ID=g697.t1.exon5;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 9366 9469 . - 0 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 9022 9091 . - . ID=g697.t1.exon6;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 9022 9091 . - 1 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 8713 8857 . - . ID=g697.t1.exon7;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 8713 8857 . - 0 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 8363 8434 . - . ID=g697.t1.exon8;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 8363 8434 . - 2 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . exon 7570 8057 . - . ID=g697.t1.exon9;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . CDS 7990 8057 . - 2 ID=cds.g697.t1;Parent=g697.t1 NODE_1453_length_11200_cov_41.4374 . three_prime_UTR 7570 7989 . - . ID=g697.t1.utr3p1;Parent=g697.t1 #PROT g697.t1 g697 MSVQSSLVMYPIWAYGTEAQRQKYLPRLATGEFVGCFGLTEPNHGSDPAGMETRAKKVGNKYIISGSKNWITNSPIADVFVVWAKCVEDGVIRGFILEKGMKGLSAPRIEGKFALRASPTGQIFMDDVEIPEENLLPNVAGLKGPFGCLTNARYGIAFGALGAAEFCLEQAKTYTLDRKQFGAPLASNQLIQKKLADMLTEISLGLVSVVQVGRLKDQGIVAPEMISLVKRNSCGKALDIARVARDMLGGNGISDEYHIIRHVLNLEAVNTYEGTHDIHALILGRAITGIQSFSK* # ORIGINAL: g1277.t1 original gene structure, not modified by PASA NODE_6864_length_500_cov_31.0212 AUGUSTUS gene 69 500 . - . ID=g1277;Name=g1277.t1 NODE_6864_length_500_cov_31.0212 AUGUSTUS mRNA 69 500 . - . ID=g1277.t1;Parent=g1277;Name=g1277.t1 NODE_6864_length_500_cov_31.0212 AUGUSTUS exon 419 500 . - . ID=g1277.t1.exon1;Parent=g1277.t1 NODE_6864_length_500_cov_31.0212 AUGUSTUS CDS 419 500 . - 1 ID=cds.g1277.t1;Parent=g1277.t1 NODE_6864_length_500_cov_31.0212 AUGUSTUS exon 69 162 . - . ID=g1277.t1.exon2;Parent=g1277.t1 NODE_6864_length_500_cov_31.0212 AUGUSTUS CDS 69 162 . - 0 ID=cds.g1277.t1;Parent=g1277.t1 #PROT g1277.t1 g1277 PSFGIGRIIYTILEHSFFVREGDEQRGVLALPPVIAPIKCSVLPLSSHETFEAFIPTI # ORIGINAL: g3805.t1 original gene structure, not modified by PASA NODE_2868_length_4890_cov_40.0631 AUGUSTUS gene 109 805 . - . ID=g3805;Name=g3805.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS mRNA 109 805 . - . ID=g3805.t1;Parent=g3805;Name=g3805.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 694 805 . - . ID=g3805.t1.exon1;Parent=g3805.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 694 805 . - 0 ID=cds.g3805.t1;Parent=g3805.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 109 521 . - . ID=g3805.t1.exon2;Parent=g3805.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 109 521 . - 2 ID=cds.g3805.t1;Parent=g3805.t1 #PROT g3805.t1 g3805 MSATEAPVPDAQPVLLTARLRLRPFHEADAPFLRMYAKNFIRTVLDRKDGDAEYYAVTSKETGAFMGACNIRFDRKHRHAEIGYWLGVPFWGQGYATEVARALVDRGFGGCDLQRVAADHFKENEASGSVLKKVGMSYEGCMRQHFQRDGRFMDLCLYGILRSEWEGLRKNDSC* # PASA_UPDATE: g3806.t1, single gene model update, valid-1, status:[pasa:asmbl_5143,status:3], valid-1 NODE_2868_length_4890_cov_40.0631 . gene 1194 2894 . + . ID=g3806;Name=g3806.t1 NODE_2868_length_4890_cov_40.0631 . mRNA 1194 2894 . + . ID=g3806.t1;Parent=g3806;Name=g3806.t1 NODE_2868_length_4890_cov_40.0631 . five_prime_UTR 1194 1265 . + . ID=g3806.t1.utr5p1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . exon 1194 1594 . + . ID=g3806.t1.exon1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . CDS 1266 1594 . + 0 ID=cds.g3806.t1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . exon 1778 1850 . + . ID=g3806.t1.exon2;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . CDS 1778 1850 . + 1 ID=cds.g3806.t1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . exon 2014 2136 . + . ID=g3806.t1.exon3;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . CDS 2014 2136 . + 0 ID=cds.g3806.t1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . exon 2437 2894 . + . ID=g3806.t1.exon4;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . CDS 2437 2625 . + 0 ID=cds.g3806.t1;Parent=g3806.t1 NODE_2868_length_4890_cov_40.0631 . three_prime_UTR 2626 2894 . + . ID=g3806.t1.utr3p1;Parent=g3806.t1 #PROT g3806.t1 g3806 MADAQPEERSRSTGPSPAPAAVADASKSVSASSVNLNASMNAVAAASSVSASIANLNATDDGSANLAVSRQARVERRLSVVDDGLNYLRRQVADAFAVFDHDQSKTVDVREIGTIVRSLGMAPTEAALHEIIAEAEEEEPTGFIKYEKFEPVMLRLMKDRKYQRDSEDLIMKAFQILDADAKGYLTTEELTRALTLNGEPFSQEEIDEMLTAAVDPEKGVIYYDDYAVLLGGEEYSG* # ORIGINAL: g3807.t1 original gene structure, not modified by PASA NODE_2868_length_4890_cov_40.0631 AUGUSTUS gene 3055 4653 . - . ID=g3807;Name=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS mRNA 3055 4653 . - . ID=g3807.t1;Parent=g3807;Name=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 4352 4653 . - . ID=g3807.t1.exon1;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 4352 4653 . - 0 ID=cds.g3807.t1;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 4025 4120 . - . ID=g3807.t1.exon2;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 4025 4120 . - 1 ID=cds.g3807.t1;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 3572 3820 . - . ID=g3807.t1.exon3;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 3572 3820 . - 1 ID=cds.g3807.t1;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS exon 3055 3328 . - . ID=g3807.t1.exon4;Parent=g3807.t1 NODE_2868_length_4890_cov_40.0631 AUGUSTUS CDS 3055 3328 . - 1 ID=cds.g3807.t1;Parent=g3807.t1 #PROT g3807.t1 g3807 MLDFIFAVDDARDWHRRNIRANPHHYSALRYCGSSVVAAVQSNIGSPVYYNTRIECEGRMIKYGIVSTEDLLSDLLDWNNLYLAGRLQKPVLVLRDCARVRQANFVNRYNALTAALLVHGKPRTTVQEEDIYRTITSLSYGGDFRMRFGEDPKKIDRIAKGSLAGFQAEYRELMQSRPYLKLHRSHGTVSFSNEYEQMRTSMIKSLPRLVRQAVVSAHIKTVGKLDSNPMHSARGPRPGAEDEILNGAGESDKLSQYILGAISPIVAETTFATAAKGVLTAGVSKALQYALAKIGKMRKATAVKGA* # PASA_UPDATE: g964.t1, single gene model update, valid-1, status:[pasa:asmbl_6543,status:12], valid-1 NODE_3788_length_2757_cov_35.4534 . gene 310 1988 . + . ID=g964;Name=g964.t1 NODE_3788_length_2757_cov_35.4534 . mRNA 310 1988 . + . ID=g964.t1;Parent=g964;Name=g964.t1 NODE_3788_length_2757_cov_35.4534 . five_prime_UTR 310 311 . + . ID=g964.t1.utr5p1;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . exon 310 372 . + . ID=g964.t1.exon1;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . CDS 312 372 . + 0 ID=cds.g964.t1;Parent=g964.t1;5_prime_partial=true NODE_3788_length_2757_cov_35.4534 . exon 622 951 . + . ID=g964.t1.exon2;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . CDS 622 951 . + 2 ID=cds.g964.t1;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . exon 1152 1289 . + . ID=g964.t1.exon3;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . CDS 1152 1289 . + 2 ID=cds.g964.t1;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . exon 1466 1574 . + . ID=g964.t1.exon4;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . CDS 1466 1574 . + 2 ID=cds.g964.t1;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . exon 1850 1988 . + . ID=g964.t1.exon5;Parent=g964.t1 NODE_3788_length_2757_cov_35.4534 . CDS 1850 1988 . + 1 ID=cds.g964.t1;Parent=g964.t1 #PROT g964.t1 g964 VAVVGWGVENNVEYWIMRNSWGSYWGENGYARVMMHKDNLALESDCSWGVPTATKPTATAAPATPVAPAAPIVTGTRGCAKRGDGVPQSIVKSPLPQTYTRPEDLPETYDPRNIAGIDYTTPNKNQHIPKYCGSCWAMATTSALSDRIKLARKGAFPDIALSAQDIVNCVTANQTIGCGGGDPTAAYSYMTSNGVTDETCTNYVSENQPCTAEYVCRNCDPSKGCFAVQNYTKYFVEEHGQVAGEAAMVGMCRICVIA* # PASA_UPDATE: g14294.t1, single gene model update, valid-1, status:[pasa:asmbl_6105,status:12], valid-1 NODE_3473_length_3391_cov_39.2413 . gene 138 425 . + . ID=g14294;Name=g14294.t1 NODE_3473_length_3391_cov_39.2413 . mRNA 138 425 . + . ID=g14294.t1;Parent=g14294;Name=g14294.t1 NODE_3473_length_3391_cov_39.2413 . exon 138 425 . + . ID=g14294.t1.exon1;Parent=g14294.t1 NODE_3473_length_3391_cov_39.2413 . CDS 138 239 . + 0 ID=cds.g14294.t1;Parent=g14294.t1;5_prime_partial=true NODE_3473_length_3391_cov_39.2413 . three_prime_UTR 240 425 . + . ID=g14294.t1.utr3p1;Parent=g14294.t1 #PROT g14294.t1 g14294 GVSSFDLPVSSQFVALVALLVAFYYANSKRSQL* # PASA_UPDATE: g14295.t1, single gene model update, valid-1, status:[pasa:asmbl_6104,status:12], valid-1 NODE_3473_length_3391_cov_39.2413 . gene 504 3379 . - . ID=g14295;Name=g14295.t1 NODE_3473_length_3391_cov_39.2413 . mRNA 504 3379 . - . ID=g14295.t1;Parent=g14295;Name=g14295.t1 NODE_3473_length_3391_cov_39.2413 . five_prime_UTR 3325 3379 . - . ID=g14295.t1.utr5p1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 3231 3379 . - . ID=g14295.t1.exon1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 3231 3324 . - 0 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 2857 3104 . - . ID=g14295.t1.exon2;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 2857 3104 . - 2 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 2580 2677 . - . ID=g14295.t1.exon3;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 2580 2677 . - 0 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 2115 2430 . - . ID=g14295.t1.exon4;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 2115 2430 . - 1 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 1951 2019 . - . ID=g14295.t1.exon5;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 1951 2019 . - 0 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 1628 1802 . - . ID=g14295.t1.exon6;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 1628 1802 . - 0 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 1385 1483 . - . ID=g14295.t1.exon7;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 1385 1483 . - 2 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 1143 1237 . - . ID=g14295.t1.exon8;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 1143 1237 . - 2 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . exon 504 991 . - . ID=g14295.t1.exon9;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . CDS 872 991 . - 0 ID=cds.g14295.t1;Parent=g14295.t1 NODE_3473_length_3391_cov_39.2413 . three_prime_UTR 504 871 . - . ID=g14295.t1.utr3p1;Parent=g14295.t1 #PROT g14295.t1 g14295 MEFLHRSEINSHGRLKSSNCLIDNRWVLKLTDFGLTNFRSNQEKLEDEDTDFQYFQSLYWTAPEILNEEQDRVLVLPGSQLGDIYSYGIILWELLSRDYPYSDADSEPNEIIDKVKEGYFRPSIPEESPEKFVKFMTKAWAQEPADRYQSFSDIIKEIKRLHPRSGNLVDNMIRMMEQYSSNLESLVEERTKQLESEKERSEELLYRMIPRSVALELKEGRIVKPELFEEVTIYFSDIVGFQLIASKSTPFQVVDLLNALYSTLDGCIENHDVYKVETISDVYMVVSGLPERNGRRHASEMANMSLDLLCAVNGFEIPHIPGSQLQLRIGLHSGSVVAGVVGLKMPRYCLFGDTVNTSSRMESGGLSLRIHLSHATASILMEEGDTYDLECRGELYVKGKGNMKTYWLHGKKGFVSTNGKARPDLSLAYSASQHEFK* # PASA_UPDATE: g4688.t1, single gene model update, valid-1, status:[pasa:asmbl_4542,status:12],[pasa:asmbl_4543,status:12], valid-1 NODE_2550_length_5921_cov_33.9533 . gene 92 5895 . + . ID=g4688;Name=g4688.t1 NODE_2550_length_5921_cov_33.9533 . mRNA 92 5895 . + . ID=g4688.t1;Parent=g4688;Name=g4688.t1 NODE_2550_length_5921_cov_33.9533 . five_prime_UTR 92 92 . + . ID=g4688.t1.utr5p1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 92 350 . + . ID=g4688.t1.exon1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 93 350 . + 0 ID=cds.g4688.t1;Parent=g4688.t1;5_prime_partial=true NODE_2550_length_5921_cov_33.9533 . exon 750 924 . + . ID=g4688.t1.exon2;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 750 924 . + 0 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 1153 3530 . + . ID=g4688.t1.exon3;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 1153 3530 . + 2 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 3867 4020 . + . ID=g4688.t1.exon4;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 3867 4020 . + 0 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 4235 4326 . + . ID=g4688.t1.exon5;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 4235 4326 . + 2 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 4749 5124 . + . ID=g4688.t1.exon6;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 4749 5124 . + 0 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 5457 5519 . + . ID=g4688.t1.exon7;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 5457 5519 . + 2 ID=cds.g4688.t1;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . exon 5819 5895 . + . ID=g4688.t1.exon8;Parent=g4688.t1 NODE_2550_length_5921_cov_33.9533 . CDS 5819 5895 . + 2 ID=cds.g4688.t1;Parent=g4688.t1 #PROT g4688.t1 g4688 VSIEDGADREYVSPASASSTADGLSPYSTAVPTSGVDLPDFGGKRTARVYVAKHPTAAAALSLLRLISIEGMKSSKGLSVLDYVLEAAPPTTTDMLTEFQTDVLSDVMTQFADHAATAALVQWAPKAALCLPSLAMMVVDKLIQGVYLRTAESVFDYIYALVVRMTGESASVLPKSFGPSHCEQLYRALNRALLYRLLLTMPVSALQQPQAYAKARDREREATPMRSADDAAIAVVMAIVQTQEVLFGPRNTDSEFSTSLFWNLERLLLDDSRQVRLIVVNALKHLVRQRKHVQEDVLRMKMRSGEMCDMYTCGFELLVLDRDPAAFIAWYTANERMVRAVLDEGALRVWRNYELTETKAADDAKTARFTRRTQRLQKHYRREHGDMEQLRIVEAAIGRRVMGVQRAELNVALKFRQNAADSLRFVREAWARMQADLARERGLFGPDVPSVLDKWMLDPAEGPDRTRRKMQPNDRFYQHYPFEPQYAEDARRTSRAERAPTSIHSERHYLARLQLGGSVGGASGGDGGDGSPDAAASGGPVVARGVASVSGQMRRQQSEMGGGEGEGVGVEEATVASDDGVSDGGETDEETGAQFVEADEDFSASDVHRIQRKLEPGDTIVSRHNCVRVAGLDVVDALLLICTQNVYVIDGFCVSDDGEILDVDSAGPLFRPVIPPSDAAAITGNKLQSSQRGSLSSSAAAAAACVRSERSVAKWPHEDIAEVHKRRLLLQDLALEVFSSDGRNHLLAFRRGERDGVYAKLSTLSGNAVVDLTADGGLKSNAMLSLDIVAAGATATAGLFGFQSLMGMGGGEAKSTPTHRWVRGEMSNFAYLMHLNTMAGRSYNDLTQYPVFPWILADYDSDELDLDNPKSFRDLSRPMGMQTPGRASEFLGRFNSWDDPTGQTPAFHYGTHYSSAMIVASYLIRLEPFTQHFLKLQGGHFDHPDRMFHSVREAWQSASETNMADVKELIPEFFYLPEFLENHNHFHFGTKQTGEELNHVMLPAWAHGSAREFIRKHREALESPYVSAHLHEWIDLVFGCKQQGEQAVDARNVFHHLSYEGAVDIEHITDVVQRNATIGIISNFGQTPRQLFKKPHPKRTQTGAYSAPAVAPDAASSGGVALQPSQWTVYSHPDMLLPSPHPIRDVRGPVGEILATTDKILALAGHCDSSVEHQMRRMGIPGCESPYYLC* # ORIGINAL: g2176.t1 original gene structure, not modified by PASA NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS gene 874 2076 . - . ID=g2176;Name=g2176.t1 NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS mRNA 874 2076 . - . ID=g2176.t1;Parent=g2176;Name=g2176.t1 NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS exon 1495 2076 . - . ID=g2176.t1.exon1;Parent=g2176.t1 NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS CDS 1495 2076 . - 0 ID=cds.g2176.t1;Parent=g2176.t1 NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS exon 874 915 . - . ID=g2176.t1.exon2;Parent=g2176.t1 NODE_3937_length_2488_cov_78.4724_potentialcontaminant AUGUSTUS CDS 874 915 . - 0 ID=cds.g2176.t1;Parent=g2176.t1 #PROT g2176.t1 g2176 MECVGINNNLVGLLLPGGRCSGTASIWMPSDERLSAAYKPPGYQKAKWDRGHLAPSNAFAYVSASIRDSFDSVSAMDATFSFVNAAPQAPSCNQIWWRILEHRTVDLVDQYAADELTNLRPSSPLRLRLTGGAQTYTYRRAYAITGVSFRNPSGALFEELLPDSQPTETKAAPVPTYFWTAVCIPQFEFFKLDKFVSKLSGPPYTSW* # PASA_UPDATE: g1285.t1, single gene model update, valid-1, status:[pasa:asmbl_1512,status:12], valid-1 NODE_1412_length_11490_cov_37.1973 . gene 6598 10941 . - . ID=g1285;Name=g1285.t1 NODE_1412_length_11490_cov_37.1973 . mRNA 6598 10941 . - . ID=g1285.t1;Parent=g1285;Name=g1285.t1 NODE_1412_length_11490_cov_37.1973 . five_prime_UTR 10906 10941 . - . ID=g1285.t1.utr5p1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 10731 10941 . - . ID=g1285.t1.exon1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 10731 10905 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 10518 10627 . - . ID=g1285.t1.exon2;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 10518 10627 . - 2 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 10041 10139 . - . ID=g1285.t1.exon3;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 10041 10139 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 9838 9936 . - . ID=g1285.t1.exon4;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 9838 9936 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 9499 9586 . - . ID=g1285.t1.exon5;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 9499 9586 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 8986 9113 . - . ID=g1285.t1.exon6;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 8986 9113 . - 2 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 8618 8770 . - . ID=g1285.t1.exon7;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 8618 8770 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 8276 8434 . - . ID=g1285.t1.exon8;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 8276 8434 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 7828 7923 . - . ID=g1285.t1.exon9;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 7828 7923 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 7455 7553 . - . ID=g1285.t1.exon10;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 7455 7553 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . exon 6598 6996 . - . ID=g1285.t1.exon11;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . CDS 6895 6996 . - 0 ID=cds.g1285.t1;Parent=g1285.t1 NODE_1412_length_11490_cov_37.1973 . three_prime_UTR 6598 6894 . - . ID=g1285.t1.utr3p1;Parent=g1285.t1 #PROT g1285.t1 g1285 MAGLVRRALYVLSEAVLVGRLVDGGKHCWARRGAAPTAFRTRTLHHVAQQTRFAWPSISHCVLPRTYSSVSKMVASSSKPLLERYEQLRGKIAAETDFGSATFANISKELASLEPIVEKIKELEARRKELIDLDRLCAESRGGDADMYKMAVDEKYECEQTIVRLESEMMMELLPKDDADSRNAMLEIRAASGGDEASLFARDMFEMYGAYASQQGWQFETYTTSENDVGGFKEAIANISGDNVFGRLKFESGVHRVQRVPATESQGRVHTSTITVALLPEPTEVDVVIDEKDLKIETMRAGGAGGQHVNKTESAIRITHIPSGLVVHVQEERSQHKNRAKALMVLRARLYEQERERVDAERISARGKQIGTGSRSERIRTYNYGQDRVTDHRVNMSVNGIDIFMLGEKLDQFIEALRLDDESRRLAAMMASDTA* # ORIGINAL: g1284.t1 original gene structure, not modified by PASA NODE_1412_length_11490_cov_37.1973 AUGUSTUS gene 4679 6115 . + . ID=g1284;Name=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS mRNA 4679 6115 . + . ID=g1284.t1;Parent=g1284;Name=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS exon 4679 4754 . + . ID=g1284.t1.exon1;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS CDS 4679 4754 . + 0 ID=cds.g1284.t1;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS exon 5274 5372 . + . ID=g1284.t1.exon2;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS CDS 5274 5372 . + 2 ID=cds.g1284.t1;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS exon 5702 5868 . + . ID=g1284.t1.exon3;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS CDS 5702 5868 . + 2 ID=cds.g1284.t1;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS exon 6035 6115 . + . ID=g1284.t1.exon4;Parent=g1284.t1 NODE_1412_length_11490_cov_37.1973 AUGUSTUS CDS 6035 6115 . + 0 ID=cds.g1284.t1;Parent=g1284.t1 #PROT g1284.t1 g1284 MKKYYFYILEIKPLVHSTIIGGHMTGGGDAYLKVSNVTVASVVAGQPVLVTVAGTITKDLNGQSTLYVDLYKNFSLFFDIHASACDFAAQPCSFAVGRPFELNLSLTVSIPATKAAITGKIYGSDSSRVRTICADFDFVY* # PASA_UPDATE: g1283.t1, single gene model update, valid-1, status:[pasa:asmbl_1511,status:12], valid-1 NODE_1412_length_11490_cov_37.1973 . gene 187 4592 . - . ID=g1283;Name=g1283.t1 NODE_1412_length_11490_cov_37.1973 . mRNA 187 4592 . - . ID=g1283.t1;Parent=g1283;Name=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 4332 4592 . - . ID=g1283.t1.exon1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 4332 4592 . - 0 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 3637 4164 . - . ID=g1283.t1.exon2;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 3637 4164 . - 0 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 3258 3413 . - . ID=g1283.t1.exon3;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 3258 3413 . - 0 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 2863 2963 . - . ID=g1283.t1.exon4;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 2863 2963 . - 0 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 2377 2508 . - . ID=g1283.t1.exon5;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 2377 2508 . - 1 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 2015 2105 . - . ID=g1283.t1.exon6;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 2015 2105 . - 1 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 1678 1823 . - . ID=g1283.t1.exon7;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 1678 1823 . - 0 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 1266 1426 . - . ID=g1283.t1.exon8;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 1266 1426 . - 1 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 848 964 . - . ID=g1283.t1.exon9;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 848 964 . - 2 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 459 600 . - . ID=g1283.t1.exon10;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 459 600 . - 2 ID=cds.g1283.t1;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . exon 187 334 . - . ID=g1283.t1.exon11;Parent=g1283.t1 NODE_1412_length_11490_cov_37.1973 . CDS 187 334 . - 1 ID=cds.g1283.t1;Parent=g1283.t1;3_prime_partial=true #PROT g1283.t1 g1283 MDGLIRVSAVLSLALVLLAGTASAFYPGYAVSSLNPNSVGYTGTLQLPTGASGPYGNDIHTLSIAVEYQTSKRIHVKITDPSSARWEVPGIVISQAPTARAADAEYDFQYTSYPFGFAIVRRSNGEALFNSTPTASQSFNGLVFENQYIELSTQLNGSPNIYGLGERVHEFRLDPNGKTYTLFNRDQATPYDDGKGGKNLYGSHPFYMDVRNGGLSHGVFLLNSNAMDVVLNPTSLTYKVVGGVLDFYVFLGPTPEEVVKQYQEVIGTPVMIPYWALGFHQCRWGYKTVAETWEVVKQYRANNLPLDTMWNDIDHMDRYFDFSLDPTNYALKDMTAFVQDLHNNGQQYMMIVDAGIAIAQGYPAYDLGNSMNVFIMKETENTAVVGKVWPGATHFPDFLHPNASEYWQTSLAQFHSSLVQFDGVWLDMNEVSNFCDGDCASAEHFTEPMETNPPYVPGGDALLTKTISMGGRHYGTSEYNAHNLFATLETKETNAFLTGALKRRPVIISRASFPGHGRYGSHWLGDNDSTYDSMRQSIAGILSFQLFGIPFVGADICGFNQNTTVELCARWMALGALYPFSRNHNTVGALSQEPYALGSVVLAASQKALNLRYTLLPLYYTLFLDANINGGSVVKPLFFEFPEDASLYGIDQQFLVGSALL # ORIGINAL: g6650.t1 original gene structure, not modified by PASA NODE_1648_length_10011_cov_37.8545 AUGUSTUS gene 8284 9854 . - . ID=g6650;Name=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS mRNA 8284 9854 . - . ID=g6650.t1;Parent=g6650;Name=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 9747 9854 . - . ID=g6650.t1.exon1;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 9747 9854 . - 0 ID=cds.g6650.t1;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 9444 9503 . - . ID=g6650.t1.exon2;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 9444 9503 . - 0 ID=cds.g6650.t1;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 9005 9085 . - . ID=g6650.t1.exon3;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 9005 9085 . - 0 ID=cds.g6650.t1;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 8642 8761 . - . ID=g6650.t1.exon4;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 8642 8761 . - 0 ID=cds.g6650.t1;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 8284 8451 . - . ID=g6650.t1.exon5;Parent=g6650.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 8284 8451 . - 0 ID=cds.g6650.t1;Parent=g6650.t1 #PROT g6650.t1 g6650 MQTRVTKATDFDEVIAAHRTFLVEITERAFLGPQSQALLAMLRSIFGMVTQFHAVQATLYRAALEELAVRSTTEKRKYARKLKGQWGLTEADVEAEKERQQRFQSTTVATTQRQIAEITRNFQETVGRFLAALSQHPDLSLRQLCFRVDFSEHYKRVNAQYAKAAKSPMRPAVAPSKT* # ORIGINAL: g6649.t1 original gene structure, not modified by PASA NODE_1648_length_10011_cov_37.8545 AUGUSTUS gene 4118 7622 . - . ID=g6649;Name=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS mRNA 4118 7622 . - . ID=g6649.t1;Parent=g6649;Name=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 7293 7622 . - . ID=g6649.t1.exon1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 7293 7622 . - 0 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 6926 7010 . - . ID=g6649.t1.exon2;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 6926 7010 . - 0 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 6187 6707 . - . ID=g6649.t1.exon3;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 6187 6707 . - 2 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 5633 5810 . - . ID=g6649.t1.exon4;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 5633 5810 . - 0 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 5285 5409 . - . ID=g6649.t1.exon5;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 5285 5409 . - 2 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 4969 5119 . - . ID=g6649.t1.exon6;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 4969 5119 . - 0 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 4764 4811 . - . ID=g6649.t1.exon7;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 4764 4811 . - 2 ID=cds.g6649.t1;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 4118 4392 . - . ID=g6649.t1.exon8;Parent=g6649.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 4118 4392 . - 2 ID=cds.g6649.t1;Parent=g6649.t1 #PROT g6649.t1 g6649 MRLTAAAALARAANMHNAVLPAGISLLRSSTRAVHTTGTSLIIHKSPFKPIQLSDQSFGEFMVDRIGRHAKGRTALVDGFTDRSLSFDEMRNNVLRVAGNLSARGVKRGDVVAIFSPNVVDYHTAFVAVTLLGGVVTTVNPTYEQKEIEFQLNDSKATLVFTVPPLMDKLQAAMRNAPLIRDIVTFGGPAVGATPFSDLVDHVPPRPVEPPRADAVRDVVALPYSSGTTGLPKGVCLTHSNLTTNLLQLLEIEADVRDDDVYIAVLPFFHIYGLMMTNKALVRGIKTVVFPRFDLEKFLEAIQKHRVTYLHIAPPIAVALAKHPLVGKYDLSSVRMVFSGAAPLGVEVSSAVADRLKCKVKQAYGMTELSPASHVTPTALIKPGAVGVLVPNSEARVVCTESGKLLGQDEVGEIHVRGPMVMKGYLNRDDATKATILDDGFLRTGDIGFIDKDGYLHIQDRVKELIKYKGFQVPPAELEALLLGHPSIADCAVIGRPCPEAGELPLAFVVTKPNISDVAESEIQSWVAERVAPHKKLRGGVRFVPQVPKSASGKILRRLLKDQILAEMKK* # ORIGINAL: g6648.t1 original gene structure, not modified by PASA NODE_1648_length_10011_cov_37.8545 AUGUSTUS gene 178 3230 . + . ID=g6648;Name=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS mRNA 178 3230 . + . ID=g6648.t1;Parent=g6648;Name=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 178 334 . + . ID=g6648.t1.exon1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 178 334 . + 1 ID=cds.g6648.t1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 648 1063 . + . ID=g6648.t1.exon2;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 648 1063 . + 0 ID=cds.g6648.t1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 1248 1398 . + . ID=g6648.t1.exon3;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 1248 1398 . + 1 ID=cds.g6648.t1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 1831 2247 . + . ID=g6648.t1.exon4;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 1831 2247 . + 0 ID=cds.g6648.t1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 2561 2721 . + . ID=g6648.t1.exon5;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 2561 2721 . + 0 ID=cds.g6648.t1;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS exon 2987 3230 . + . ID=g6648.t1.exon6;Parent=g6648.t1 NODE_1648_length_10011_cov_37.8545 AUGUSTUS CDS 2987 3230 . + 1 ID=cds.g6648.t1;Parent=g6648.t1 #PROT g6648.t1 g6648 NSSQSLNRDSLYWVWPTLSSAMLTAVAYCVKAIGVKMLGSRFHLAAFFERIQEALFAEFVLGALAKKRRSLGNVFSRFGDGPSFRQERTTTKSSGDASPDVRGSDSVSMGSASDDAGNNGLPLTGDELAHLNEKDVTHQTFAKLVRFVRTNRLKSTTFSAHSGAQTDPITSSIEAAVLSRRIYENVRAPLRTHLIVEDFERFFAQPEMVQKAFKLFDINEDGKVTRREMKEVVTRLYKERKALALSLNDTKTTVSKLDTVITIAMFILLFFVYLIIFGVDLVKALPSITAILVACAFAFGNAIKALFESAMFLFITHAYDVGDRVIIDDVQLYVHKINLLTTVFHRTDGPRVYYPNSQLAQKVIQNIKRSPDQWDTVNLTVDFSTPTYKLRQLEEKLKEFVAKESVDYYPLGELIVKDLENCNKLQLSIFIQHRCNWQKSMNRWSRRTKFLIACKDAMELLDIGYRELEHRIQLVPPPVDQEALAQHLARVIPGLTATSASASKRVRIDEGMTI* # ORIGINAL: g1894.t1 original gene structure, not modified by PASA NODE_292_length_27872_cov_46.3346 AUGUSTUS gene 15438 16013 . - . ID=g1894;Name=g1894.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS mRNA 15438 16013 . - . ID=g1894.t1;Parent=g1894;Name=g1894.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 15438 16013 . - . ID=g1894.t1.exon1;Parent=g1894.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 15438 16013 . - 0 ID=cds.g1894.t1;Parent=g1894.t1 #PROT g1894.t1 g1894 MKFFESAHSFPHSWEHVTTASWRKYPNPHSPHVQAVDVLDRTVDEATGRLLSERVITVEGGLPSWLCKLFNSSSVSAHVHEVSEVDPINKRMTLRTRNISWSNFITVEETCIYTQDAQDPQKTNFSQEARITAFGSLSALRSKMESAMLDRFRSTASKGKDALEHVCDNITREMQELAEVTASATAAAGVV* # PASA_UPDATE: g1892.t1, single gene model update, valid-1, status:[pasa:asmbl_5252,status:12],[pasa:asmbl_5256,status:13], valid-1 NODE_292_length_27872_cov_46.3346 . gene 10917 12405 . - . ID=g1892;Name=g1892.t1 NODE_292_length_27872_cov_46.3346 . mRNA 10917 12405 . - . ID=g1892.t1;Parent=g1892;Name=g1892.t1 NODE_292_length_27872_cov_46.3346 . five_prime_UTR 12361 12405 . - . ID=g1892.t1.utr5p1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . exon 12358 12405 . - . ID=g1892.t1.exon1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . CDS 12358 12360 . - 0 ID=cds.g1892.t1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . exon 12081 12190 . - . ID=g1892.t1.exon2;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . CDS 12081 12190 . - 0 ID=cds.g1892.t1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . exon 11929 11963 . - . ID=g1892.t1.exon3;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . CDS 11929 11963 . - 1 ID=cds.g1892.t1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . exon 10917 11655 . - . ID=g1892.t1.exon4;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . CDS 11585 11655 . - 2 ID=cds.g1892.t1;Parent=g1892.t1 NODE_292_length_27872_cov_46.3346 . three_prime_UTR 10917 11584 . - . ID=g1892.t1.utr3p1;Parent=g1892.t1 #PROT g1892.t1 g1892 MSAVFNFQSLLVVILLFICTCSYVRAQVPSVIEGHKKGFRGIFYKGSVIGDRLSPYVSVCCVVMAVSILFFT* # ORIGINAL: g1895.t1 original gene structure, not modified by PASA NODE_292_length_27872_cov_46.3346 AUGUSTUS gene 16774 19605 . + . ID=g1895;Name=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS mRNA 16774 19605 . + . ID=g1895.t1;Parent=g1895;Name=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 16774 17110 . + . ID=g1895.t1.exon1;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 16774 17110 . + 0 ID=cds.g1895.t1;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 17236 17352 . + . ID=g1895.t1.exon2;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 17236 17352 . + 2 ID=cds.g1895.t1;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 18390 18481 . + . ID=g1895.t1.exon3;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 18390 18481 . + 2 ID=cds.g1895.t1;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 18703 19605 . + . ID=g1895.t1.exon4;Parent=g1895.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 18703 19605 . + 0 ID=cds.g1895.t1;Parent=g1895.t1 #PROT g1895.t1 g1895 MGSVAEIEVVRLRQLLCERDAELSRLRDRIAACKCASSHVLDTANADLVCKIAAPAQFEGQHAFDGDRVCVRPTKDEGCSGDVSKRRSPSALTRQQIARYSRHLLIPEIGVRVGLMKFYVNIAGQTSIIASSVLVIGAGGLGCPVVAAAGIDNPATRYLINDACVLTKRPLVSGSAVRLEGQLSVYNYKGGPCYRCMFPTPPPPAAVANCGDAGVLGAITGIMGCIQALEVVKIASRGNDAPRPSASLRTAPEFSAEQQQRPSMDTSYSQKMLLFDGCEGTFRQIRLRGRRPDCAVCGEVPTITSLSSFDYSQKCGPPTDKTASVRVLEAGERVTCAEFASAILSPGSDVIAPLVLDVRSHIEREICALAGSLHVPLAELQTDAGMDRVVAALAGVCRSPVAESATAGECGGECSASVGICEPALAEHPHGHRDVFVVCRRGNDSQLAVRLLRDKGVSMTARDVRGGLDAWASQIDTEFPTY* # ORIGINAL: g1890.t1 original gene structure, not modified by PASA NODE_292_length_27872_cov_46.3346 AUGUSTUS gene 261 2948 . + . ID=g1890;Name=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS mRNA 261 2948 . + . ID=g1890.t1;Parent=g1890;Name=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 261 386 . + . ID=g1890.t1.exon1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 261 386 . + 0 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 564 650 . + . ID=g1890.t1.exon2;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 564 650 . + 0 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 936 1169 . + . ID=g1890.t1.exon3;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 936 1169 . + 0 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 1358 1522 . + . ID=g1890.t1.exon4;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 1358 1522 . + 0 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 1778 1913 . + . ID=g1890.t1.exon5;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 1778 1913 . + 0 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 2159 2488 . + . ID=g1890.t1.exon6;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 2159 2488 . + 2 ID=cds.g1890.t1;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 2674 2948 . + . ID=g1890.t1.exon7;Parent=g1890.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 2674 2948 . + 2 ID=cds.g1890.t1;Parent=g1890.t1 #PROT g1890.t1 g1890 YLESGDQFCDRLDGDFSFVVFDTRDNSYIVARDAIGVTCLYQGWGKDGSVWFASEMKALKDHCERIEAFPPGYVFSSKTGMRRYYSPKWIDENLIPTRPVDLKQLRESFERAVVKRLMCDVPYGVLLSGGLDSSLVASIAQRHARSKNEAPEHSIDWWPRLHSFAIGLKGAPDLKAARSVADFLGTAHHEFHFTVDDGLDALRQVIYHLETYDTTTVRASTPMFLLSRKIKATGVKMVLSGEGSDEIFGGYLYFHKAPSAEEFHKETVKRVLNLHTADCLRANKSTMAWGLEARVPFLDKAFLDTSMDIDPKEKLHVTGRIEKYIMRAAFDTPEDPYLPREILWRQKEQFSDGVGYSWIDGLKANAEKSVSDDEFSKAAALFPVDTPKTKEAFYYRSIFASMFPQESARATVVNWVPKTEWGCNADPSGRAQAVHLAALDTPAPADGLTR* # PASA_UPDATE: g1896.t1, single gene model update, valid-1, status:[pasa:asmbl_5253,status:3], valid-1 NODE_292_length_27872_cov_46.3346 . gene 20155 24948 . - . ID=g1896;Name=g1896.t1 NODE_292_length_27872_cov_46.3346 . mRNA 20155 24948 . - . ID=g1896.t1;Parent=g1896;Name=g1896.t1 NODE_292_length_27872_cov_46.3346 . five_prime_UTR 24622 24948 . - . ID=g1896.t1.utr5p1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 23673 24948 . - . ID=g1896.t1.exon1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 23673 24621 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 23270 23346 . - . ID=g1896.t1.exon2;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 23270 23346 . - 2 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 23019 23119 . - . ID=g1896.t1.exon3;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 23019 23119 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 22631 22698 . - . ID=g1896.t1.exon4;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 22631 22698 . - 1 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 22167 22249 . - . ID=g1896.t1.exon5;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 22167 22249 . - 2 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 21804 21905 . - . ID=g1896.t1.exon6;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 21804 21905 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 21451 21561 . - . ID=g1896.t1.exon7;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 21451 21561 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 20978 21079 . - . ID=g1896.t1.exon8;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 20978 21079 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . exon 20155 20829 . - . ID=g1896.t1.exon9;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . CDS 20692 20829 . - 0 ID=cds.g1896.t1;Parent=g1896.t1 NODE_292_length_27872_cov_46.3346 . three_prime_UTR 20155 20691 . - . ID=g1896.t1.utr3p1;Parent=g1896.t1 #PROT g1896.t1 g1896 MQHSAGSGGGGHAHPAPPPSIIPPGRRLGHSRNGSGSLFQARTLVRTNSSASTDDQLFPNTLSLRGITNTIEALRELVPFSQNGQPLSSVGGVSGQATTTQLSASTTSPQSSLQQSQLQHMLLGQQQQQPIPTSQQQSQLAGVYHHYASAVAGASSHEHTHAGGISHNDRVFQDGQTLRRAAHLRSSVPMVGAHPMSSSTVSAAHGGAAGNSHALVHGGTEGPDDTSVDVDDGGNFGGNPHEFGGGRPGFTVDEDGIETPVGEQEGSGGNSGNAGEEGAGNYPTSRIGLDSFIQWAYRSLPFFLLLLLVFGYRHKLGILINCWLSTVLLHANYTIVKQVGLKDQRSVGRLLLCIVNLIAHTIAFYYIFRSDELYYSLIFNPPPDPIDLWNTLWIICISDTVAKYITMVIKALVVIVLGGSPPFKRTAQYYSLIEHVSQLYRSLLPIPVWYTYLLDDTYGQVFSHLVTGLYLAFKITGVVEKTTQFWFSWRAFVRHELQYGQYATKEQIAEADNTCAICQEDLRDPVALHCKHIFCEDCVGAWLERERTCPLCRATVQMAGKRVWRDGSTSCLVQVF* # ORIGINAL: g1891.t1 original gene structure, not modified by PASA NODE_292_length_27872_cov_46.3346 AUGUSTUS gene 3588 9583 . - . ID=g1891;Name=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS mRNA 3588 9583 . - . ID=g1891.t1;Parent=g1891;Name=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 9401 9583 . - . ID=g1891.t1.exon1;Parent=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 9401 9583 . - 0 ID=cds.g1891.t1;Parent=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 8798 9148 . - . ID=g1891.t1.exon2;Parent=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 8798 9148 . - 0 ID=cds.g1891.t1;Parent=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS exon 3588 8450 . - . ID=g1891.t1.exon3;Parent=g1891.t1 NODE_292_length_27872_cov_46.3346 AUGUSTUS CDS 3588 8450 . - 0 ID=cds.g1891.t1;Parent=g1891.t1 #PROT g1891.t1 g1891 MDRQELRSVSGDESHDGMEGKRSSVVAKLKNGLFGVLFVMLKETRRPLWLVMFEMIVEFFQDLAFPFAYHHFPWNSNQASWFEQFLRIFVPETYVRSSKPTFYVIVIIVVLILADVAFTAYSFSRDKYRFLWLLKILRAFGGLITTVLSIPFVAIMASMLSCDGVDQCWAGGLDLFYKVLALVVGTCFICFALLVATNFFEQDPTRKVHLSRPHARVDLMYVSMRIYLAIVFELVHSTWVLVGSCVIASMLSAFLFTWYAPYHRYFFGQLRVVATWIYAFASLCLVVTKITNDESKSQAALFFFLFSPVVAWVALKALEARKKMVLAKTIKQCRSPFEVELKIRFHLEQAGCLRKSVDQCTREGFDKTAFVREINGWFQEAVKRFHESSLIHIFWGQFHLHSTRKRNLALTEFVKAADDFHPQLDEQFIVYRMRKMLTEDAAFNKNSMDAIAYVTFQRDMRDARKYDRRAAHFQMLFWKELAETRPDTKRLYATGLKISMALSVARDSYERLMRTNATSPQVLRMYAGFLIYSAKDARYGEDLLVRADELEEMQVSQSTELSSTQLFTDQNATISISCEVGREGEVVDTNQLALRLFGFKRAELLGRSINTIIPRAMAEHHNQIIRDTVDKGNADTEADSEIVARRFVLGLHKSGHLVPVTIVVKQVFDDKKGAIFIAALIPFVTSDHFILLDKNDGIIGCTSGCAELFGSRADMLLTGAIHIGSWLNETPSTFNGKTEEIALRQRLTSGIYDIHINSKPWNVHGDDFSILRLSAECVIDTRTRPTLDGHSSFNALTTDITATALHGEGGTVAQASNAATATADAISAAIRAAMASFPPIPSLADAEPLTGGYIVADLGAEVIHAAVAAPTLAPAPASSSSSSRPKTMEDTPIRRTQPHTPPPSRRPPPLEAAAPAAGVGQSGEDATSRAIREATARLFGAVPDEDDGPRSGAALLDGGYSAPDKYGVIEYHEGDGDDSENNPMSAAQALGRGSRESVPSKGKESKGSMDSMEMHPRRNKEAPVNVHFEDSDGADSNVANDSDDNNNNSDGYARGRKGSSTNVSVEAVRLSVDSARGANGGGPGKDQGGLGALFKKKENAMKDNSMDEKYGAYEDDEHEGSVSSSRVSSVTPHEKALRAISTRNKKRSKESVLLVFGILVVMVCILAASIIITLVLSSYGRDYKQSIDCTVSSSQQRRDIAEIAVVTRSLELLSSNMLNATLEPRAEDMSILVNATSDVASIASTLFDGGRCLRGDVLAFYSLRTIPFVTKINAVITKRIGSLIQEIGSFVTASSLVAQLPEAQVNSTANFNVWYVLANSFDYLIVAIETTTLMYGQQINDYANSFMSIADIIIWTPFTCIIFLGFGLMAPALIMANNRMGKMLGLFLEIPRESVRQASAQATERFEALVSEFNDDADLSDDGFNDEKSQHSAATMESHMSASRRHVSGKSVKEDADYDEMQKLAQGLRAAAAAGSNSPGNHAAATPVRASHEKRSRGKGGRHHHQAKKMSNPHRWWRTLGNMIVQQRWWIIKALIFVPICVGYFVAVGILADQVIWDTDNAGPNVMWSGTREYLLGEVFYFTRECAAAGDAYALGNATVRSLALIDEARWVHDGLLFGNVSMGTPGLARLSGQSSILFGDACNYISAPGCETFAGGIMTKGLDVALRAFLDTCESMMLSLSTVPRPMAAADTYDALNSDEMVFVRDLLFHYLSAATIASTTNLADSATQNVQSFQKNSEIAAIVVNVIMFVVFAVFYLPLSRAIDKQIKNSRMLLMLIPTELLENHGSIRHYFQHEL* # PASA_UPDATE: g1897.t1, single gene model update, valid-1, status:[pasa:asmbl_5260,status:3], valid-1 NODE_292_length_27872_cov_46.3346 . gene 25227 27004 . + . ID=g1897;Name=g1897.t1 NODE_292_length_27872_cov_46.3346 . mRNA 25227 27004 . + . ID=g1897.t1;Parent=g1897;Name=g1897.t1 NODE_292_length_27872_cov_46.3346 . five_prime_UTR 25227 25456 . + . ID=g1897.t1.utr5p1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . exon 25227 25595 . + . ID=g1897.t1.exon1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . CDS 25457 25595 . + 0 ID=cds.g1897.t1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . exon 25720 25982 . + . ID=g1897.t1.exon2;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . CDS 25720 25982 . + 2 ID=cds.g1897.t1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . exon 26178 26286 . + . ID=g1897.t1.exon3;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . CDS 26178 26286 . + 0 ID=cds.g1897.t1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . exon 26542 27004 . + . ID=g1897.t1.exon4;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . CDS 26542 26582 . + 2 ID=cds.g1897.t1;Parent=g1897.t1 NODE_292_length_27872_cov_46.3346 . three_prime_UTR 26583 27004 . + . ID=g1897.t1.utr3p1;Parent=g1897.t1 #PROT g1897.t1 g1897 MASARIRLCKPCHLVGVIAFVAIALSLLGCASAAIPMSIPRQNKCQICISLVNEVIDYIRTREDSEELPSDFCRRLYDYHAETDDQGNIVRYVPGKAPILLQMESLGRIGGAPALSSMKLLADAIHTSKALMAQCQEWFNAQKINLERWRHEHSHLTTLKPFLCDNIFNAGCNPPPQRDEGDL* # PASA_UPDATE: g1893.t1, single gene model update, valid-1, status:[pasa:asmbl_5259,status:3], valid-1 NODE_292_length_27872_cov_46.3346 . gene 12908 14607 . + . ID=g1893;Name=g1893.t1 NODE_292_length_27872_cov_46.3346 . mRNA 12908 14607 . + . ID=g1893.t1;Parent=g1893;Name=g1893.t1 NODE_292_length_27872_cov_46.3346 . five_prime_UTR 12908 13152 . + . ID=g1893.t1.utr5p1;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . exon 12908 13236 . + . ID=g1893.t1.exon1;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . CDS 13153 13236 . + 0 ID=cds.g1893.t1;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . exon 13368 13447 . + . ID=g1893.t1.exon2;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . CDS 13368 13447 . + 0 ID=cds.g1893.t1;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . exon 13614 14607 . + . ID=g1893.t1.exon3;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . CDS 13614 14028 . + 1 ID=cds.g1893.t1;Parent=g1893.t1 NODE_292_length_27872_cov_46.3346 . three_prime_UTR 14029 14607 . + . ID=g1893.t1.utr3p1;Parent=g1893.t1 #PROT g1893.t1 g1893 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIIGTNVSTTYITCPAEPGRTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEEELPPEFKLFLPVRKTAY* # PASA_UPDATE: g7732.t1, single gene model update, valid-1, status:[pasa:asmbl_3352,status:12], valid-1 NODE_2044_length_7952_cov_42.3925 . gene 3827 4911 . + . ID=g7732;Name=g7732.t1 NODE_2044_length_7952_cov_42.3925 . mRNA 3827 4911 . + . ID=g7732.t1;Parent=g7732;Name=g7732.t1 NODE_2044_length_7952_cov_42.3925 . five_prime_UTR 3827 3895 . + . ID=g7732.t1.utr5p1;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . exon 3827 4044 . + . ID=g7732.t1.exon1;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . CDS 3896 4044 . + 0 ID=cds.g7732.t1;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . exon 4280 4332 . + . ID=g7732.t1.exon2;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . CDS 4280 4332 . + 1 ID=cds.g7732.t1;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . exon 4623 4911 . + . ID=g7732.t1.exon3;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . CDS 4623 4762 . + 2 ID=cds.g7732.t1;Parent=g7732.t1 NODE_2044_length_7952_cov_42.3925 . three_prime_UTR 4763 4911 . + . ID=g7732.t1.utr3p1;Parent=g7732.t1 #PROT g7732.t1 g7732 MALNQNNFMTFNYAMGAATLLGGVMGFAKAQSVPSLVAGIAFAALYGYAGYLIEGRTNVVAGHGVGFGASVALAGAMGRRYMKTGKMFPPGVMAGLGTAAAVYNGYRYFHLKR* # PASA_UPDATE: g7733.t1, single gene model update, valid-1, status:[pasa:asmbl_3351,status:12], valid-1 NODE_2044_length_7952_cov_42.3925 . gene 5107 7885 . - . ID=g7733;Name=g7733.t1 NODE_2044_length_7952_cov_42.3925 . mRNA 5107 7885 . - . ID=g7733.t1;Parent=g7733;Name=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 7857 7885 . - . ID=g7733.t1.exon1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 7857 7885 . - 0 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 7528 7680 . - . ID=g7733.t1.exon2;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 7528 7680 . - 1 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 7082 7160 . - . ID=g7733.t1.exon3;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 7082 7160 . - 1 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 5927 6931 . - . ID=g7733.t1.exon4;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 5927 6931 . - 0 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 5582 5755 . - . ID=g7733.t1.exon5;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 5582 5755 . - 0 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . exon 5107 5440 . - . ID=g7733.t1.exon6;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . CDS 5342 5440 . - 0 ID=cds.g7733.t1;Parent=g7733.t1 NODE_2044_length_7952_cov_42.3925 . three_prime_UTR 5107 5341 . - . ID=g7733.t1.utr3p1;Parent=g7733.t1 #PROT g7733.t1 g7733 MQFTVNVAYFPIKSGPGPARQLSANGPQLASRSVPPTRRSSKELLEMDGIRIRSPEEEMARAQSMPASPSPGTPSNELLDVFGGPAPVATSKSANTSNERLVDDLLGGFGGVSVSSPAISSPQPGSATSRNSQFGDLFSFDSAAPMGATQTPTPTPMGAQGMFPQYPQAPGMGMAGGMAPGMGMGAPGLSGVRPQQRLSQQYGPGMGIAPGMGMGGMGAFPAAAPMGAGMGWPGQQAPVQPQRSQQQQQQQPAPTTPLDPFADLTGFGGSSGSPKPTGAAPAPRPASGVYPAAGAPQAGQAGGQRNSGPGVGAQPQMQMPQQQYVPRPNYYVNTAASGQSQQSQQQSQAGQNRAKSPNVAGAAGAGIGAGAGGSGFGADFSDLLGAHNFKATQQKQPGTLKEMMRDEKKAHAGTPEDLEKIKVEEWMEGKRNNLRALISTLHLILWDGSGWHETGMGALVKGAQVKKAYMKACLIVHPDKAVGTANESLAKRIFCELNDAYNAFRESGQVDL* # ORIGINAL: g7731.t1 original gene structure, not modified by PASA NODE_2044_length_7952_cov_42.3925 AUGUSTUS gene 421 3381 . - . ID=g7731;Name=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS mRNA 421 3381 . - . ID=g7731.t1;Parent=g7731;Name=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS exon 3262 3381 . - . ID=g7731.t1.exon1;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS CDS 3262 3381 . - 0 ID=cds.g7731.t1;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS exon 3014 3078 . - . ID=g7731.t1.exon2;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS CDS 3014 3078 . - 0 ID=cds.g7731.t1;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS exon 2611 2891 . - . ID=g7731.t1.exon3;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS CDS 2611 2891 . - 1 ID=cds.g7731.t1;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS exon 421 2508 . - . ID=g7731.t1.exon4;Parent=g7731.t1 NODE_2044_length_7952_cov_42.3925 AUGUSTUS CDS 421 2508 . - 2 ID=cds.g7731.t1;Parent=g7731.t1 #PROT g7731.t1 g7731 MAAPQSVTKGAYKARISRMFAEAGNKFGWFERSSNAIIAELQLWDAVINDSTSDNENGLSTSEAHTDYTDDVDPPAHGTPAESASQFTATRMLLGVDAIKTAEKVDKREAQETIANVDCDESQFARVLDTEEGQSDQGAPSPPTDRLMQLIDTGMVTVRGRRNRDDSKKTRGHVGRRLSFELSPSRSPDAVLGAHTHETLTASPVAYDDSGSVGYAGTMTEECHAERPGCDDSALDAVDDLTRHFDAELCINSNVEEGCGRMTERASGADDGVFCWEGVPCCEEGAEGARARARDIHTCPPTHDDSHCSGDFQYDSGEHGLCGDYADAYVDAQMEADKQESVGCGSGGTDCAEDEKYLPHNLRLGGGIESSAVTHAGPICHSVQHASTTSGTIESSGGQGTYGVHATAGYDEEPQLAACPSMSRATEGSGNDSDGAESDCEVRGRTQRRRAKVIDSPPVSPRHSSSGVALSPGLHARNAGFNEEGDESPLHARRRTVRRAILSDSDDDADNDTGVVEPSPAANDRRHSTQPGCGTESSFSPSTQQPCLSLHPPNSPLFAQPDTIAPIAAMTDEEELEPARVISKRRAVRRRIVSDSDSDDEATQEDADVAHVTDHVVEGHTSGSLETRNSCSSATDVTFQSESECGAAKTTATRHVASPTTSSTSPVVGTRTKRVTVERARTRRVIDSPSSDSDENTPPHNIDDHVSSSAVTPACTHSANDARGSALEDNVCAAASATPRRLSSLFDDDTSCNDGSPCRGAGNKEIVGGGMSDTEHPGSATADRPVGVRKHVMPVEVISLLSDDDCAPAAAESVRGRKATNSKAGIRAARVHHSCSDDTEDDADANQKMEE # ORIGINAL: g3859.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 24596 25486 . - . ID=g3859;Name=g3859.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 24596 25486 . - . ID=g3859.t1;Parent=g3859;Name=g3859.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 25462 25486 . - . ID=g3859.t1.exon1;Parent=g3859.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 25462 25486 . - 0 ID=cds.g3859.t1;Parent=g3859.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 24596 25377 . - . ID=g3859.t1.exon2;Parent=g3859.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 24596 25377 . - 2 ID=cds.g3859.t1;Parent=g3859.t1 #PROT g3859.t1 g3859 MEGAVTKDDNAGYGAGAAPVCTFIKKSRISSNIRKRKVDSDDDDKHAEDVSSFADDAAKLLSETRREKKNPMVQSTRRQKTEDGPAAVMVSYESTRSAKASGLEDGGATMVNRLEADEVKRVAPIAAKKGNDDADEDGKGAGDTLYRGQAAYTEGMPNMNYLRPGPLKAPQNIRSTSRFDYQPDICKDYKETGFCGYGDSCKFLHDRSDYKSGWQMEREWENTQRDKSHAAFLAAQDNASGNKSDQDDDLPFACFICREPFKNPIVTK* # ORIGINAL: g3853.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 5437 7729 . - . ID=g3853;Name=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 5437 7729 . - . ID=g3853.t1;Parent=g3853;Name=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 7657 7729 . - . ID=g3853.t1.exon1;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 7657 7729 . - 0 ID=cds.g3853.t1;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 7179 7403 . - . ID=g3853.t1.exon2;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 7179 7403 . - 2 ID=cds.g3853.t1;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 6069 7002 . - . ID=g3853.t1.exon3;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 6069 7002 . - 2 ID=cds.g3853.t1;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 5437 5716 . - . ID=g3853.t1.exon4;Parent=g3853.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 5437 5716 . - 1 ID=cds.g3853.t1;Parent=g3853.t1 #PROT g3853.t1 g3853 MMKWAFLLSLACACAAIPNGWIGDGHCDGHLNTPEHAFDGGDCCAWSNTGEFAATCGLDAMCDCRIDQSPPTHGEGDASGLVETCETDCHNGGVCANGGCICVGGWEGDRCLHRTRRASIASLAVMNSSPVYQQGRVFVSVAVESSGNAGDIAVTCRRCTDGDRPSTAACTGPLLAQADTAPKNSRFSLFFGTFSNTTLVQCRAKGGPTSASKTTVVKVTSDRRLGLPSLPTRKEVRTLTAKQWEEFASGCGELKRRGIWNHFVSVHLEAIANRLPDAGEERCLLPSSRKKCSNADRNSAHRGPTFLPWHRQLLVQFEGAMRMVLGNPVFTVPYWDWRVRSPSLFSARYLGRSEAKTHAVVDGPFKGWGLKRCIGCVEPHVTAAAVDQLLRFRGQYDEPPYESGNGAFRDILEGFEPYGLHNQMHAYVGGAMDTFRSPEDVTFYLLHSFVDYLWYTWTESLGRPYRPADGDPDAPVSSTPSAKLFPWDCTIGQMLRTIGYAYD* # ORIGINAL: g3856.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 14926 16082 . + . ID=g3856;Name=g3856.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 14926 16082 . + . ID=g3856.t1;Parent=g3856;Name=g3856.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 14926 15094 . + . ID=g3856.t1.exon1;Parent=g3856.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 14926 15094 . + 0 ID=cds.g3856.t1;Parent=g3856.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 15400 16082 . + . ID=g3856.t1.exon2;Parent=g3856.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 15400 16082 . + 2 ID=cds.g3856.t1;Parent=g3856.t1 #PROT g3856.t1 g3856 MILVYNICMHADGPSGPLVRQLNTEGYESLACLLGPHHMPAKCASFPLSRGTDEASGLYFPVIECEGFTLSPATEDIKNAGRPTPPSPPPHTVASYIASNALASRWEHSDWFKRLRDGTRSTLAIGSGHGASRGLDTMAGALSVGAAAMIVSDVLSTVWFNFDALLPHDTPTADAGVEPGHRHTPDPSRTTAAGTNATASVAAAALPSHVTWDDARHQIEIETSRALDAIAQVGERLAHCEHGFSAPVGARDTPARAHSPTGKVDSAAVKRMIGEHLAWMGRR* # ORIGINAL: g3851.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 173 1855 . - . ID=g3851;Name=g3851.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 173 1855 . - . ID=g3851.t1;Parent=g3851;Name=g3851.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 173 1855 . - . ID=g3851.t1.exon1;Parent=g3851.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 173 1855 . - 0 ID=cds.g3851.t1;Parent=g3851.t1 #PROT g3851.t1 g3851 MEQSSRYDEDVLDNKFFKTLQTKHRKLYQKAATNRWIVCVPRSGTLEGWTPNKQDFESHVLRPSGHSGGPAGRNGSASDSANGGDDDAVEYLTVGGKSVLISGKLMRTGSGFAKPRESHILFEETFYNAKDEGYSVVCLDRPLEGGLDVDGVSSGGGFTRLESFADCSRFLWSDPQNEEAFKKTRERMSLFNNTLEYLDSLRHTIDAASSVYAGAVQTVLKETHLRQLARTGSKSDMGAIKLAVETFVMDGLYSKVFEVLLDVYALADTSLNKAARNMSDMSEEEAGLRDAGLVAGAYEALAELSLLNTSTTPLEKLGCLRRSVLALSRAAFGTDGATRRDSQPLTSDELIPIIVYLVVKSEVPNWMATLAYVSNFHFSKTLNAESGFYLASFEAAVEHVRASGAQVSRGHVRKTGRSASVSWVNARHADTLLALRNGVRTMTVSSVEIHQNAVQEFFRSVEEDAMPRVRALLAGGGMEGAGAAAASGSGSGVAKEGGSSSPAWEAQLCHPLCDCSKCERVTKAMGAAAQTRKDSAVTVYARDDEGCTALHIAARLGFVEM # PASA_UPDATE: g3858.t1, single gene model update, valid-1, status:[pasa:asmbl_5501,status:12], valid-1 NODE_305_length_27580_cov_48.2791 . gene 22293 23380 . - . ID=g3858;Name=g3858.t1 NODE_305_length_27580_cov_48.2791 . mRNA 22293 23380 . - . ID=g3858.t1;Parent=g3858;Name=g3858.t1 NODE_305_length_27580_cov_48.2791 . five_prime_UTR 23239 23380 . - . ID=g3858.t1.utr5p1;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . exon 23164 23380 . - . ID=g3858.t1.exon1;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . CDS 23164 23238 . - 0 ID=cds.g3858.t1;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . exon 22903 23004 . - . ID=g3858.t1.exon2;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . CDS 22903 23004 . - 0 ID=cds.g3858.t1;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . exon 22293 22587 . - . ID=g3858.t1.exon3;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . CDS 22459 22587 . - 0 ID=cds.g3858.t1;Parent=g3858.t1 NODE_305_length_27580_cov_48.2791 . three_prime_UTR 22293 22458 . - . ID=g3858.t1.utr3p1;Parent=g3858.t1 #PROT g3858.t1 g3858 MPNVRCGAVGNAQAATPEVQELIEKIRPHAEEKQGKKFDAFEAKSFATQVVAGTNFFIKVHTGNDKYAHLRVHRSLPPDQNLTLSAIQTDKTEDDVIEHFQ* # ORIGINAL: g3855.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 12563 12829 . - . ID=g3855;Name=g3855.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 12563 12829 . - . ID=g3855.t1;Parent=g3855;Name=g3855.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 12563 12829 . - . ID=g3855.t1.exon1;Parent=g3855.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 12563 12829 . - 0 ID=cds.g3855.t1;Parent=g3855.t1 #PROT g3855.t1 g3855 MPTLEVEVVALSEGRQATGNNILKRLNNVRMQCFPLRFKRTSYSLNRGRFIIGGHGEFAGECTYLWDASGLCDARMYPKMRSCDSRRP* # ORIGINAL: g3860.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 26117 27193 . + . ID=g3860;Name=g3860.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 26117 27193 . + . ID=g3860.t1;Parent=g3860;Name=g3860.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 26117 27193 . + . ID=g3860.t1.exon1;Parent=g3860.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 26117 27193 . + 0 ID=cds.g3860.t1;Parent=g3860.t1 #PROT g3860.t1 g3860 MVHMCKISGTSCTAEVFYFRFEVGKKRPIIIEEPDAKYLVQEIPRNKKWKSIPTEVYKCTDCDETKPVLVKSSIDGHADEHGETKICPECGIPITRRTGVFRHLANIHGKKTTRKKSTEPSSTSHKKRARSNRRANKAAMLSAVRKAGLTTAVRHTTHHPAQGTNSLASSGLSAEPYSTATTKASAVQASDDAWTAFVQGSTAWNSQEFALALQSYTMPELGHITNEELAGSLGGVNHPCGCTHCDAKNTQVTWSLRDLSARGQVNGPHLGVDVHGAGAGAIATVGEDGNKSARDARVGSCIAASPTSARLLKHSLKQPTADKLSDDDMSSELNDSDSDSEYEGLPLCVKRGQTVRSV* # PASA_UPDATE: g3857.t1, single gene model update, valid-1, status:[pasa:asmbl_5500,status:3], valid-1 NODE_305_length_27580_cov_48.2791 . gene 16741 20695 . - . ID=g3857;Name=g3857.t1 NODE_305_length_27580_cov_48.2791 . mRNA 16741 20695 . - . ID=g3857.t1;Parent=g3857;Name=g3857.t1 NODE_305_length_27580_cov_48.2791 . five_prime_UTR 20376 20695 . - . ID=g3857.t1.utr5p1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 20210 20695 . - . ID=g3857.t1.exon1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 20210 20375 . - 0 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 19679 19790 . - . ID=g3857.t1.exon2;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 19679 19790 . - 2 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 19124 19344 . - . ID=g3857.t1.exon3;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 19124 19344 . - 1 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 18712 18836 . - . ID=g3857.t1.exon4;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 18712 18836 . - 2 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 18099 18306 . - . ID=g3857.t1.exon5;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 18099 18306 . - 0 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 17420 17806 . - . ID=g3857.t1.exon6;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 17420 17806 . - 2 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . exon 16741 17071 . - . ID=g3857.t1.exon7;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . CDS 16932 17071 . - 2 ID=cds.g3857.t1;Parent=g3857.t1 NODE_305_length_27580_cov_48.2791 . three_prime_UTR 16741 16931 . - . ID=g3857.t1.utr3p1;Parent=g3857.t1 #PROT g3857.t1 g3857 MATAPMRPTTDLLAVHRQLWPQLDLTETPLPTAWSPKDKYSLLELSHSSLRVHYKGQGKNDSDAAAVRANTHIPPACGVFYFEVKVVSKGRDGYIGIGLCSSGVSLNRLPGWEKGSYGYHGDDGHSFCSSSSGATYGPAYTTGDVIGCCVNFVESTCFYTKNGVNLGVAFRDLRGQLFPTVGLLTPGEVLEANFGQRPFEFDIEGYMQETRGRVRGMLSNVNLAEVPCQSGGTWESSITRLIASYLVHHGYSETALVFAGDTNDTIAESVASVRSRQRIREFVLGGDIDAVLRLIAELYPALATARPDLIFQLQCRRFVELVRESASASATPAVGDGSNPIERMMLYGQSLQEACDENPLLSSNRAVLEEAFSLLAYPDPSQSPMAYLLQPSQREPLATEINSAILELQGLPRQAPLEIIVRQAAVAVKELTRPPVGSGAAAFVSVEDILRE* # ORIGINAL: g3854.t1 original gene structure, not modified by PASA NODE_305_length_27580_cov_48.2791 AUGUSTUS gene 8576 11663 . + . ID=g3854;Name=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS mRNA 8576 11663 . + . ID=g3854.t1;Parent=g3854;Name=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 8576 8712 . + . ID=g3854.t1.exon1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 8576 8712 . + 0 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 9007 9154 . + . ID=g3854.t1.exon2;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 9007 9154 . + 1 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 9445 9546 . + . ID=g3854.t1.exon3;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 9445 9546 . + 0 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 9737 9849 . + . ID=g3854.t1.exon4;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 9737 9849 . + 0 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 10233 10301 . + . ID=g3854.t1.exon5;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 10233 10301 . + 1 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 10563 10721 . + . ID=g3854.t1.exon6;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 10563 10721 . + 1 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 11149 11236 . + . ID=g3854.t1.exon7;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 11149 11236 . + 1 ID=cds.g3854.t1;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS exon 11487 11663 . + . ID=g3854.t1.exon8;Parent=g3854.t1 NODE_305_length_27580_cov_48.2791 AUGUSTUS CDS 11487 11663 . + 0 ID=cds.g3854.t1;Parent=g3854.t1 #PROT g3854.t1 g3854 MHALVFRRFGGPEVLEYAEIPRPTLIPGHAIVRMKAIGLNFADVYRRKGNYHLKGSPPFVAGYEGAGVVEEIDTTGVDAEIAAGVDVGTRVGFGDVPFSNAEYVLAPLTHLIPLPDDITFETAAGILLQGLTAQYLVADSHPIRPTDTVVVHAAAGGVGQVLCQLAKHSGAHKVIGLTSSAEKKEVALAQAKCDEVFLYSEDWVGLVKAATDGKGASVVYDSVGSTLDDSFRATRQCGHVVFYGMAGGDPKHVDPRYLMDESKTLTGGDLWSYLTSHAERVRRSRILFEALRSGAITHTIAATYPLAEGAHAHEALESRKVAGKILLIPA* # PASA_UPDATE: g3852.t1, single gene model update, valid-1, status:[pasa:asmbl_5499,status:12], valid-1 NODE_305_length_27580_cov_48.2791 . gene 2664 5250 . + . ID=g3852;Name=g3852.t1 NODE_305_length_27580_cov_48.2791 . mRNA 2664 5250 . + . ID=g3852.t1;Parent=g3852;Name=g3852.t1 NODE_305_length_27580_cov_48.2791 . five_prime_UTR 2664 2711 . + . ID=g3852.t1.utr5p1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 2664 2930 . + . ID=g3852.t1.exon1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 2712 2930 . + 0 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 3139 3213 . + . ID=g3852.t1.exon2;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 3139 3213 . + 0 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 3319 3430 . + . ID=g3852.t1.exon3;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 3319 3430 . + 0 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 3570 3914 . + . ID=g3852.t1.exon4;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 3570 3914 . + 2 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 4099 4321 . + . ID=g3852.t1.exon5;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 4099 4321 . + 2 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 4460 4505 . + . ID=g3852.t1.exon6;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 4460 4505 . + 1 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 4687 4731 . + . ID=g3852.t1.exon7;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 4687 4731 . + 0 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . exon 4927 5250 . + . ID=g3852.t1.exon8;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . CDS 4927 5022 . + 0 ID=cds.g3852.t1;Parent=g3852.t1 NODE_305_length_27580_cov_48.2791 . three_prime_UTR 5023 5250 . + . ID=g3852.t1.utr3p1;Parent=g3852.t1 #PROT g3852.t1 g3852 MMLRVVALLALVAASMAVDCTTFTDKDTCISNGCLSCHAAAISGKLFCFSQEQAAKLAPSVFTCDGAAPKAVIGMYDHTPAFLEFVKKFDKTYETAEEYAHRFGVFVKNMARVAAYNALEETAEVYGVTQFSDLTEEEFSRKYLSQVSWNELAARNNGTSKAKIVESFPVADMPDSVDWRNTSVTEVKNQGQCGSCWAFSTTGNIEGQWQRKTGKLVSLSEQELVDCDTVDEACNGGLPENAYAQIQKIGGLDLESDYPYKAAKNTCAFKSAGVAATVTGYLSLPTDEDQLAAWVAQNGPVSIGINAGPMQFYFGGVADPWTILCNPKNLDHGVLIVGYGTDAKTSKKYWIIKNSWGPTWGEKGYYRIVRGKGKCGLNTMPTSATV* # ORIGINAL: g8849.t1 original gene structure, not modified by PASA NODE_1184_length_13317_cov_37.1856 AUGUSTUS gene 1524 4510 . + . ID=g8849;Name=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS mRNA 1524 4510 . + . ID=g8849.t1;Parent=g8849;Name=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 1524 1577 . + . ID=g8849.t1.exon1;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 1524 1577 . + 0 ID=cds.g8849.t1;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 1744 1869 . + . ID=g8849.t1.exon2;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 1744 1869 . + 0 ID=cds.g8849.t1;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 2012 2288 . + . ID=g8849.t1.exon3;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 2012 2288 . + 0 ID=cds.g8849.t1;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 2425 2502 . + . ID=g8849.t1.exon4;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 2425 2502 . + 2 ID=cds.g8849.t1;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 2721 4510 . + . ID=g8849.t1.exon5;Parent=g8849.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 2721 4510 . + 2 ID=cds.g8849.t1;Parent=g8849.t1 #PROT g8849.t1 g8849 MARTGDDCRFFLSAACMKGSMCPYRHCEGAISATEVCDAWEFGKCTTEDCPKRHNTYAFVPQQRDRARVPCFYESTPSGCLKPHCPFAHRRDKNASTPPPTTDVPPPPQPESDTGASSSPAAAATASAPEEQTPLPLAPTTQASASTIRLTSDNGTATHTVPAVMPPTRLTHPLDSSTAVDESFRVKTYEEVMADKRSKKATATAPATQATQVTQAKAQPTKEPKAPEGKPAATPTNAPAGAPVATPTQPPTKAPLTAAQKQQLLLAKLHDEQEKQRALREAKAVPASTATAATTTKTVPSAVPARIAAPAQKGPPATVKAAGMGGPLAAAATAATKSSVAPAASGNNSSSSNGNGNGNTEIVATARESTAADPGAPRQAVIPTPQQQQQQQPQQTPNAEGAAALATVRPGKRQASAEPVEGQPNGQRQKTTAFVSAVKTTAAPDLKIRSYEEIMEEKRKAKEAVAPPAAAAAAPRQPPKQRLFGKQQQQQQQQQQQQQQQQQQQQQPNATEQTTPGSQPARIPAAAPKPAPVPSAVATSGAAAVKGANAATPKPAQPAVVAKAAAPVPPPAPAPVPTATATPTTAPAPAPAPATTVKATAMQSAATVPKTAQKAPTTPQKAAPVPTAASPAHTTAASSVAPTAVPARSSVAATTAAAPAPPPTASPMKRPLGVESQVHAPPSKKAKTEPDITSARDDGDDDDLDFDDLLGDNDDADLDPVDCAMRDAPVATGQSARPPATLSAPAKAKAAAVTATVTDDDFDRELAELEGFLD* # ORIGINAL: g8850.t1 original gene structure, not modified by PASA NODE_1184_length_13317_cov_37.1856 AUGUSTUS gene 5179 8976 . - . ID=g8850;Name=g8850.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS mRNA 5179 8976 . - . ID=g8850.t1;Parent=g8850;Name=g8850.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 8731 8976 . - . ID=g8850.t1.exon1;Parent=g8850.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 8731 8976 . - 0 ID=cds.g8850.t1;Parent=g8850.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 5179 8607 . - . ID=g8850.t1.exon2;Parent=g8850.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 5179 8607 . - 0 ID=cds.g8850.t1;Parent=g8850.t1 #PROT g8850.t1 g8850 MMSPGGHGAAPAAPPEAQLAGGCSGGGGGGGEGGRVLHWADLVFSPSLLDAWMRTADTDDDAAAYELIQSLLDQARASSTVSVAFATGNDKGSIHSIHSVVAGAFSIQLCRLSAVILLQIKSALVDTADATAPADPQPQLQLHPASPAPPPAPSTTTNSTAAHRPPSSERSRVLRQLAVRAACLVGATAVDIDHRLSLVAQRELVDDLAACHVRGECGALAAVERARWVVRRATSEAVTGAPVNCRAVAVAVGVGVGVGVAVSAGAGAQAPVVGAEDEAAATALLLRVVRDPAIALGIAHGFDTHVTLGGGADGAAVCGMIRAPVAAVQVQCQVAFDLGELCFARQKYDDADECFGTCDAVLAEARAWSSQRAYVVLDDGMLTGYRAALAARRDASGGIEGESAHSQSESRALAECASLIPPSRGPGVPVHSGATGDSLGGAHTVDVSSAAVTAVTASVDVGSAAVTAVTVGVGFGSTWLAAHTSLNPADVSHSSVALSAWWAHTSAVRDSQDGTRKEKEKERDWDNGSSGRKRRRSLSAERERDDGRVMWASRAGPSCECSLSVLLWDGGGLVPVDAAAFVHHLSREGGADDPDSFAANRAVHLLQRATALGAALDVAKATALFSELSEFAGARAQATVSREGPARERAKKRRSGMRDSWNLLSLAATYAPLDLQRRLFSLRGGRMDAQCLQRFMEALASPVAIPSADTLFGFLGILLDGGYPELGAARSYLGRLRSALSKLASREERADAASVCECASMLLGVFASCADDPLRPFHAPRNGEPGLDRMMTALAEHVTTGTPDGDWALGAQRPPPSLTTPAARFALRQLRSAEALDVFLAVAVATANRTLAEARPDATQTIRHPRRPLGPLVAGQEHPGELSRDTTGSAAAQGGAAGGVSVAGDVGAGAEAAVDVAGALGMDMGNGKRELTDAAVDRVKSAPVDAPVNAAPVTAVKDTESRGEGVQLADGPRRVATAAVESVCELALQACRHHPDDARYWAVAGDALHAVGRWAPAAACHVRAIVLCTLMVGCPIPIPPTGCASMGGWGGHTGAPVHADEGGAFGGDARAAEGVVFASLVEKSAVRLALSLWHLGRFFAAAAAWQLGARTDAMWAVGAVRKGVAAVCACGGAFPSTSAQWLWDPLLVEALVCAFASHTPASQADAQRGLDHVTRARWLAARPELTTGNDVSTVARARQSLARLLLCALDDMFDCGKLLEGLVG* # ORIGINAL: g8851.t1 original gene structure, not modified by PASA NODE_1184_length_13317_cov_37.1856 AUGUSTUS gene 10997 13275 . + . ID=g8851;Name=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS mRNA 10997 13275 . + . ID=g8851.t1;Parent=g8851;Name=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 10997 11017 . + . ID=g8851.t1.exon1;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 10997 11017 . + 0 ID=cds.g8851.t1;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 11847 12017 . + . ID=g8851.t1.exon2;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 11847 12017 . + 0 ID=cds.g8851.t1;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 12401 12512 . + . ID=g8851.t1.exon3;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 12401 12512 . + 0 ID=cds.g8851.t1;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 12792 12984 . + . ID=g8851.t1.exon4;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 12792 12984 . + 2 ID=cds.g8851.t1;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS exon 13152 13275 . + . ID=g8851.t1.exon5;Parent=g8851.t1 NODE_1184_length_13317_cov_37.1856 AUGUSTUS CDS 13152 13275 . + 1 ID=cds.g8851.t1;Parent=g8851.t1 #PROT g8851.t1 g8851 MPADDVQYQIPDVPEGPRVVKVTKSNTGLDFSIKGGSDHKLPILISRIFENGAAARTNLKCGDEILEVNGTSMEGLTHEKAVDTLKRTGNLITLKVRFNATAHQRLCDALIQANQRRNTMDPSRRSSAIPGLGSMTEEEAILHEIMSVPLVLSAVSRNGRDGQIERDNSFRVIGGDGNEMAILAKDPATCELWVSAIQQNLATIAVS # ORIGINAL: g13693.t1 original gene structure, not modified by PASA NODE_3800_length_2726_cov_13.4447 AUGUSTUS gene 54 2325 . + . ID=g13693;Name=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS mRNA 54 2325 . + . ID=g13693.t1;Parent=g13693;Name=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 54 199 . + . ID=g13693.t1.exon1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 54 199 . + 1 ID=cds.g13693.t1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 443 556 . + . ID=g13693.t1.exon2;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 443 556 . + 2 ID=cds.g13693.t1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 1041 1145 . + . ID=g13693.t1.exon3;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 1041 1145 . + 2 ID=cds.g13693.t1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 1612 1664 . + . ID=g13693.t1.exon4;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 1612 1664 . + 2 ID=cds.g13693.t1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 1983 2087 . + . ID=g13693.t1.exon5;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 1983 2087 . + 0 ID=cds.g13693.t1;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS exon 2314 2325 . + . ID=g13693.t1.exon6;Parent=g13693.t1 NODE_3800_length_2726_cov_13.4447 AUGUSTUS CDS 2314 2325 . + 0 ID=cds.g13693.t1;Parent=g13693.t1 #PROT g13693.t1 g13693 HSTAVLTSVLLPLCISIACSLGICSVANFDFTKNCTKCIPNYYNASCAGGVCQCAACPCVNGVCDSNGNGSCTACREGYWGLYCNQMCLCKNGACLDGKAGSGACAAGSCVNNYRGTNCDEICDCVNGQPDDGVDGGGLGVPSEGIDGIGQCSSCKQGYVGLNCNATCTCKNGVCAV* # ORIGINAL: g8929.t1 original gene structure, not modified by PASA NODE_4145_length_2123_cov_36.417 AUGUSTUS gene 1296 1730 . + . ID=g8929;Name=g8929.t1 NODE_4145_length_2123_cov_36.417 AUGUSTUS mRNA 1296 1730 . + . ID=g8929.t1;Parent=g8929;Name=g8929.t1 NODE_4145_length_2123_cov_36.417 AUGUSTUS exon 1296 1730 . + . ID=g8929.t1.exon1;Parent=g8929.t1 NODE_4145_length_2123_cov_36.417 AUGUSTUS CDS 1296 1730 . + 0 ID=cds.g8929.t1;Parent=g8929.t1 #PROT g8929.t1 g8929 MTAAVVVITCAHVIGLLPGSYVDGLRRYYVPPECLSDAPVAVLSQNGETAFMCKEKKACFRGHGVTLSDDADAVPFWEAYTPPNATTLFYAMRNNTGSVVVSGESGWLYGVLDAGVYVSTDNGTSFNPVLLWNCTDAAGKNLAV* # ORIGINAL: g11890.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 46318 49482 . - . ID=g11890;Name=g11890.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 46318 49482 . - . ID=g11890.t1;Parent=g11890;Name=g11890.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 46318 49482 . - . ID=g11890.t1.exon1;Parent=g11890.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 46318 49482 . - 0 ID=cds.g11890.t1;Parent=g11890.t1 #PROT g11890.t1 g11890 MFKMRPVQPRAPRMPSGRAPHEHTANSGQSQRPHLHIARVVVSAPVQPTCKSALSNATVRVSAATQPSNATIRFATVAYFILVMGLSVSLPPQVRSSDTPLCPEGYWQNGKSRAELLKEKAGPATFQDDAFGWRRDADLDPACQLCPKDSRCPLGAKECIACGSDNFDAGGRLSFAKYLKLHGNKIPPQTYQDEMGQSECKQCPPGALVDTTNRDDGGMCTCAAGYYEYYEKQASANSNRPNRTSYLDSVPDGAPSHQYAGEVDLASSSIQSRMECIPCPPRSTSNPGAKSIEACTCLDNYFRDESFRWDEPCQLITRPPQPDKPNATSISDTEIYVEWWPASSANGPILESAYELYVDGKPHNYNNMTGRGVVDGKPLAFIAMADAAAADSMQAFTAVIGDDLLPATEYCVSVKAFTAGGGTLSTPQCVTTRPAGCKRGLSLPGTFTLPNGTFQDCRAGTYADKCGMHECTPCLPGLYQPNTGASSVVTCLACPAGFHSPSGSATCSTCGAHEHCPRASPSTAHLLSSWANIPPKSPLVRLQDSNVVEIMPKAEPVVVRSGMTAGGLALLWLGVFAVLFVVVVSSVVCFCPAKSNTEPREVQQCGKVASILRAADFVFTSVLRDVEVTIGLPTKRGVADDESNATRSKAVTLGADMSAPPVVRCAVKKTPSLRRATITILYFAAILAAAGYLTGDWMNTRYIEVRSVVPMYNAAGDVISPPPGLSFRIVLLGSQLTCEDANVTVRALDTYSAQTTAQPVDYTVECTAKITQGTESSDEGETEMPVGSIVYSDEDLMSCGTVGGASCIALTLKPNPLVRIYRTQSVSVTLTSTVGQPVWAQAMRVWASVPSWQKGVDSWVEFGAPSPTTARAAANASHATDNSGELLSGQVFTAPVALSHAFLTYNGDEVRSRGFELYLSGEPATFATSEPVSFLTLSVPVTVSATETKIDVVEQRTLTDLLARIFSFIGAIGTASALVIAIAFKWPTACAWAVGKCIRPMCQHVSDGAQWMWRRAENGVDCICRCSRMYRRASVDEESAEQNAHSDELTPLTH* # PASA_UPDATE: g11888.t1, single gene model update, valid-1, status:[pasa:asmbl_6145,status:12],[pasa:asmbl_6149,status:12],[pasa:asmbl_6150,status:12], valid-1 NODE_34_length_56205_cov_41.4687 . gene 33735 41379 . + . ID=g11888;Name=g11888.t1 NODE_34_length_56205_cov_41.4687 . mRNA 33735 41379 . + . ID=g11888.t1;Parent=g11888;Name=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 33735 33779 . + . ID=g11888.t1.exon1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 33735 33779 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 33919 34079 . + . ID=g11888.t1.exon2;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 33919 34079 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 34243 34702 . + . ID=g11888.t1.exon3;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 34243 34702 . + 1 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 34859 39557 . + . ID=g11888.t1.exon4;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 34859 39557 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 39680 39966 . + . ID=g11888.t1.exon5;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 39680 39966 . + 2 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 40132 40452 . + . ID=g11888.t1.exon6;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 40132 40452 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 40637 40888 . + . ID=g11888.t1.exon7;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 40637 40888 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . exon 41131 41379 . + . ID=g11888.t1.exon8;Parent=g11888.t1 NODE_34_length_56205_cov_41.4687 . CDS 41131 41379 . + 0 ID=cds.g11888.t1;Parent=g11888.t1 #PROT g11888.t1 g11888 MAEDRARNAQYEYRANSNLVLQADRSLISRVRDEATGEVQSLAGRLGHSRMGDKVRHAVPAELEERKKKRDAKKASEESVRGPKGKRGGRSRDEDDDYTGLKYRPKTRDTHATYGVLLSFIQGMIGDKPREVLFAAADDVLEVLKDDGVRDPDKKRAVERQLNSLASDSAVANLSSDKFTQLVNLGKKITDYYGDREDDQAPAENMEDEAVAVVIDEDEDEEEDEEMDEVRDEDDEEGDEGKDADNSEALKGDEANPDGAAQFAGKGKDTLDPRTVDAYWLQRELNKFYEDAIESQKKADEVLEILRASPDPREAEVKLVLLLDYEKFDIIRLIRNNIKTVLYCTLLNRAQGDEERKEIESEMAQDPEAAAILRVLSGASGADDDEERRGREKRRKTDTDAMDVDGADGKKSAGVAAVRQTLDLEALTFAQGGRFMANSKCQLPEGSFRKQKKGYEEVHVPALKPKPYDAKEKLVKIEEMPSWARPAFAKFQTLNRIQSRLYQATMMSDENILLCAPTGAGKTNVAMLSMLREIGKHVRDDGSVDVDAFKIVYVAPMKSLVAEMVGNFRSRLTDAYGIQVSELTGDVQLSKEQFAATQVIVCTPEKWDVITRKGGERSLSQLVSLVIIDEIHLLHDDRGPVLESIVARSVRNAEATQEPIRLVGLSATLPNYEDVATFLRVDPSKGLFFFDNSFRPVPLEQQYIGITEKKATRRFELMNEIAYEKVMECAGKVQVLVFVHSRKETGKTARALRDMCLQNETIGQFLREDSASVEILRTEAENTANSELKDLLRYGFAIHHAGMSRIDRTLVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWVELSALDVLQMLGRAGRPQFDSKGEGILITSHAELQYYLSLLNQQLPVESQFVKKLPDNLNAEIVLGTVQNAREASAWLGYTYLYVRMLRTPTLYGVSHDELERDPLLEGRRADLIHTAANMLDKANLIKYDRKSGQFQVTDLGRIASHYYCTFDTIQTYNSLLRPTLSMIELFRVFSLSSEFKYIGVREEEKLELQKLMERVPIPVKESIEEPSAKINVLLQAYISQLKLEGFALMSDMVYITQSAGRLVRAIFEIVLRRGWAQLADKALNLCKMIDKRMWLSMTPLRQFSKIPGDVINRLEKKEFPWERLYDLNATEIAELLNAPKLGKAMHKYIHSFPRMELAAHVQPITRSTLRIELTLTPDFQWDEKIHGNSEAFWIVVEDVDGENILHHEYFVLKQKFAKEDHHVSIFVPIFEPLPPQYFVRVVSDRWLRAETSLPISFRHLILPEKNAPTTELLDLQPLPITAIRNPRAEAALFKDRFSLFNTVQTQCFNSLYGADDSVLVGAPTGSGKTVCAELALLRLFSETENGKAVYIAPLQAIVDERLAEWSERFGKLGKRVTALTGDAAVDVKLLDKSDIVVSTADRWDVLSRRWKQRKAVQAVALFVVDEIHMIGGEQGPVLEVVCSRMRYISSLIEKPIRIVALGSSLANAKDVGHWLGVTQHNLFNFHPNVRPVPLELHVQGFPISHTGTRLAAMGKPVYTAIRQLSPNKPVIVFVAARKQASIAALDIAAYAAADDEAGRFLHCAAEELAPHLESIRDETLKEAVSSGVAYYHGGLSETEKQTVENLYNAGAVQVVVAARDQCWGMTMAGQLVVVMDTQFYDGRDHRYVDYPVPDVLQMMGRANRPGVDANARCVLMCQTSKKEFYKKFVYEPLPVESHLDHSLHDHFNSEIVTKTIENKQDAVDYLTWTFLYRRMNQNPNYYNLQGTSHRHLSDHLSELVENTLGDLERSKCIEIVDEMDLLPLNLGMIAAFYYVNYMTIELFSSSLAEKTKLRGLVEIVCSATEFDALPVRHREDRILKQLSNRLPIKLASDKFNDPHIKANILLQSHFSRIQLPAELQTDLETVLLRAVPLIQACVDVVSSNAWLAPAMAAMELSQMVTQAQWDRDSVLKQVPHFTTDVIQRCKEKKVDNVFELLELDEGDRNSVLKLTARQMQDVARFCNRYPNIELTYEIPGAEEGIPSKSAAAVNVVVEREDDEPEVGPVIAPFYPGKKAEGWWVVLGDPATNKLVSIKRVTLQKRAKVKLDFEAPNPGDYKYTLYFMCDSYLGCDQEYEANLKVVQAEEDGSEAMDES* # PASA_UPDATE: g11884.t1, single gene model update, valid-1, status:[pasa:asmbl_6142,status:3], valid-1 NODE_34_length_56205_cov_41.4687 . gene 16952 21503 . - . ID=g11884;Name=g11884.t1 NODE_34_length_56205_cov_41.4687 . mRNA 16952 21503 . - . ID=g11884.t1;Parent=g11884;Name=g11884.t1 NODE_34_length_56205_cov_41.4687 . five_prime_UTR 21356 21503 . - . ID=g11884.t1.utr5p1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . exon 18383 21503 . - . ID=g11884.t1.exon1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . CDS 18383 21355 . - 0 ID=cds.g11884.t1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . exon 18046 18120 . - . ID=g11884.t1.exon2;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . CDS 18046 18120 . - 0 ID=cds.g11884.t1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . exon 17651 17798 . - . ID=g11884.t1.exon3;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . CDS 17651 17798 . - 0 ID=cds.g11884.t1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . exon 16952 17329 . - . ID=g11884.t1.exon4;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . CDS 17175 17329 . - 2 ID=cds.g11884.t1;Parent=g11884.t1 NODE_34_length_56205_cov_41.4687 . three_prime_UTR 16952 17174 . - . ID=g11884.t1.utr3p1;Parent=g11884.t1 #PROT g11884.t1 g11884 MTDCIQIVHSPSDRDTLFLVFPREILIMDLGISQGVGTIPLDRTSSPFVRMFACARRPGLVACQHENGVVSVRQRRPGRDVVYDTRCQSDMLRLGRGCKLAGLSMDPVDESRFAGVTTDGRFLVWELTSDDEALAAGAGEAETAVPQRTSSASGRQSKSSFLDVSFNDGDVRPHASPEAPLRITLRSQLDGLWSPVTCIATAPVFPTHAPGSNTPTGHAPHVSASGRVSMEAFRSAVLAPVSAWKDPHRFAAVGTTAGTLQVIDVSSGCVVRELAVHATQVKGLEWLDADTILSFSVEEQSAGSYRNYLKKTDLRTGESVAVRANRGIEMAPVRELRASHARRYFLVCPRDAALELWDARSFTPIHDMPPFLGVSAFEWSPVAQKPKRRTSQTQLQVHTQQPHALGSGDEGASAPVGRDRQGSSTTAPLSAPPAIVKEHFVFTLADGSLHHYTVEGTLVTAGSRMQPEVGMNSISAVAWKDEMLVTGDIAGNLHLWDLKARISKTVPTGGGVVRKLRFAPGRGNYRMLVVYPDALDMWDAERADRLASLRPSARSGSKEALLDTARPIDAEWLSADRPLVAFQDGCVRCFDHTLRRMCSPIPSYVFSTAVNSALNGGDADDSVPSPTSRPHCTHPRIAFHVKTFLQHQHWVAGGYRLSTAAPPPPQEESVLTPTTPMTPFAIDAEPPGDATPTPTTPSLAAPSAVSAELGLFQSKVTLAIRDLPAQLARTLQEPHIGTARRCLAVARHYGDELEFHFWTVAVHFLQRHKDRPMPLLSARVLPAQPPIATVTAPALAASSLASSSAGASTLAHNPSLTRDSIDFNVDEIANEAAAERAGLGLGASSASTRFVGNGASLPPFYDLLCDCPSVTQRELQRLSTHRTFRTSYELTQRSIERHVLLGQRERAVRLLLETDPEEGGFLTDGLRACLVAATISPDSFQNTMKLVGTSLIASGKVADGVELLTLINRQHDACRYLQTYGRWNQAAWLAKSTLSDDECSDILQRWADNLAANGQKSKAALVLVSVGLFLRAANVLVANKQPDVAALLIESCIEYGVVIHDSDAKCPIDQRTCMQAVFVEYAAFLKESGHTEASAHYMQRASQIAEALAHASASAQ* # PASA_UPDATE: g11892.t1, single gene model update, valid-1, status:[pasa:asmbl_6143,status:12], valid-1 NODE_34_length_56205_cov_41.4687 . gene 52508 54028 . - . ID=g11892;Name=g11892.t1 NODE_34_length_56205_cov_41.4687 . mRNA 52508 54028 . - . ID=g11892.t1;Parent=g11892;Name=g11892.t1 NODE_34_length_56205_cov_41.4687 . five_prime_UTR 54025 54028 . - . ID=g11892.t1.utr5p1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . exon 53931 54028 . - . ID=g11892.t1.exon1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . CDS 53931 54024 . - 0 ID=cds.g11892.t1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . exon 53621 53755 . - . ID=g11892.t1.exon2;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . CDS 53621 53755 . - 2 ID=cds.g11892.t1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . exon 53189 53475 . - . ID=g11892.t1.exon3;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . CDS 53189 53475 . - 2 ID=cds.g11892.t1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . exon 52508 52991 . - . ID=g11892.t1.exon4;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . CDS 52881 52991 . - 0 ID=cds.g11892.t1;Parent=g11892.t1 NODE_34_length_56205_cov_41.4687 . three_prime_UTR 52508 52880 . - . ID=g11892.t1.utr3p1;Parent=g11892.t1 #PROT g11892.t1 g11892 MASPCVLWVAMNKMTSTRATIVVCLLFTVFVGIHGDTVVRTGALCLRGWCADSVEVTVERGDHIYVWRNGGLYAHHGVYIGDGQVVHFDSGIGTKFSAQIRVTSLDAFHGGSTVFVADYGSLLFGYSSEELDDDAVVANAKTQVGRAGYSLIFDNCEHFAHYCKTGSPHSAQINHAIGVSVAAFIGGVLIGLASEPASSAPDNATATA* # ORIGINAL: g11881.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 8826 11302 . + . ID=g11881;Name=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 8826 11302 . + . ID=g11881.t1;Parent=g11881;Name=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 8826 8951 . + . ID=g11881.t1.exon1;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 8826 8951 . + 0 ID=cds.g11881.t1;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 9131 9247 . + . ID=g11881.t1.exon2;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 9131 9247 . + 0 ID=cds.g11881.t1;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 9466 10895 . + . ID=g11881.t1.exon3;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 9466 10895 . + 0 ID=cds.g11881.t1;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 11143 11302 . + . ID=g11881.t1.exon4;Parent=g11881.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 11143 11302 . + 1 ID=cds.g11881.t1;Parent=g11881.t1 #PROT g11881.t1 g11881 MDPAAVILRGCARDIDAFRSHMGASEANGAAYTALVVQAPTFTRDATIRLIFPSPKKKSDKADAAAGISTETFAHDFQQYLASSIATEYIESVHSHTDIFVNLNLRRETVYKLVFKAVLDAGDSYGTVVRPPSSNDTGDIAVIVSPIPESSNCSLTQWRSVLATRLLVRTVRASGFTVIEEPGSVVNALPIAADYIRVLGPYATDVDSGSSVSIDIRRFASDNSASFAPDAATRLPIVCVARESDSLRKILKLNKVVTALPSDDGEQRRQCVAVVSPATQSSHELSLLLAALAIPKMHDERQVPSVDTHIQVAQGFPVHALALVSVSAAHVTTPAGVVTASSARSALGARSLSHILSRNTEWDAVDARWTAECVAEAQLAFALLGRATNRDVSVRLPQSASVQHGERERDRDGSGESGVSASARDAPDTRPPGVTAASDAGVPVGEFDGDFVMYNCARLMTLIDRHNALVCGGRISAASTVEETRDYARLNDEEWALLIGHVVRLPGVVAEAARSVFADESRGTSGSSGSGGGSGPALPPNATSFAAHRVPEFLSRFCRDFSAYYNRVRLLPPGDSGDAPPSARVHFIRALRGVVRSALLLMDLTPIHAL* # ORIGINAL: g11882.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 11608 13513 . - . ID=g11882;Name=g11882.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 11608 13513 . - . ID=g11882.t1;Parent=g11882;Name=g11882.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 12845 13513 . - . ID=g11882.t1.exon1;Parent=g11882.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 12845 13513 . - 0 ID=cds.g11882.t1;Parent=g11882.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 11608 12657 . - . ID=g11882.t1.exon2;Parent=g11882.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 11608 12657 . - 0 ID=cds.g11882.t1;Parent=g11882.t1 #PROT g11882.t1 g11882 MSETEGFGSLSPEIVVHHVVPFLDGAAIAVLAKVNRTLRAHLWRLRLLHLWPLYMKKYLIDLAFRAELALFLPVDRLYLVVPGVEGDTLSRTCTDLSAFARVHTADLCGLPDMSYGPSINTMDLSPLEGVHTVRMCLNPQVTRGIDLTPLARAHTLSIYTKANGVDFSPVANVPCLELASASGNLSDFVPLRGRHMIVMIEDVVQPDLSPIISARKVTIPLCKSIRDFSPLSRVHTVSLGECDAQALPDALGSVHTLVLTGWWMLKNVSTVRSVHTLIAAQSCLTDIAPLSGVHTLQCSVTNTDLSPLQTAHSLTLGAEFNVRGLASLGRVHKLSYRGRTANKSDFLQLGGVRHLSILFSDELADVSGLGRVHSLHIDQCHHVTDVLALGGIHSVKISSSSLRDVAALGRVHTLDLSNCAMVEDVSGLGGVHTLNLEKCKLVKDVSQLGGIYSLNLASTAVTDVSALGRVRILDLSFCPVEDVSALGSVHELNLRHCDNVTDCSALGRVHRLNLSNTSVEDVSALAGVHTLYLTSSFVKDVSSLGHVCVLDIRNTGVYDFTALANVRQLSRW* # ORIGINAL: g11883.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 13972 16750 . + . ID=g11883;Name=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 13972 16750 . + . ID=g11883.t1;Parent=g11883;Name=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 13972 14370 . + . ID=g11883.t1.exon1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 13972 14370 . + 0 ID=cds.g11883.t1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 14584 14744 . + . ID=g11883.t1.exon2;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 14584 14744 . + 0 ID=cds.g11883.t1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 15089 15248 . + . ID=g11883.t1.exon3;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 15089 15248 . + 1 ID=cds.g11883.t1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 15428 15838 . + . ID=g11883.t1.exon4;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 15428 15838 . + 0 ID=cds.g11883.t1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 16070 16123 . + . ID=g11883.t1.exon5;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 16070 16123 . + 0 ID=cds.g11883.t1;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 16478 16750 . + . ID=g11883.t1.exon6;Parent=g11883.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 16478 16750 . + 0 ID=cds.g11883.t1;Parent=g11883.t1 #PROT g11883.t1 g11883 MAALIRSASRMMRTCGATGTPTHTPCRQSGMFRVPRAHFSVIQQGSAKTKSATQAASPADSAEAATRAMLASFDSDSPDGALFQNEASSPGAVFQGSSTDFPCVSREIERSAEGGPEPVYAKINSGYKLYEHKHPFKFELGGVLPEFKIAYETWGTLNADKSNAVLLHTGLSASSHAKSHPDNKNPGWWEKFIGPGMAIDTNKFFVVCTNVIGSCYGSSGPSSINALTGSHYAMTFPLLKVQDMVRAQFYLLDSLGVKRLHASVGSSLGGMQSLAAATLFPDRVGRVVSISAAAKTHPMSIAMRYVQRRVLMSDPHWFGGNYYNKTFPHLGLKLSREIATITYRSGPEWELRFGRKRNDIAPSFCPDFLIETYLDHQGEQFCLRYDPNSLLYISKAMDLFDVGDGYGTMEDGLARVTCPVLVIGVQSDVLFPVWQQREIAQVLRNVGNNSVTYYELDAMYGHDTFLLDLNTVGSAVKGHLENILE* # PASA_UPDATE: g11889.t1, single gene model update, valid-1, status:[pasa:asmbl_6146,status:12],[pasa:asmbl_6151,status:12],[pasa:asmbl_6152,status:12], valid-1 NODE_34_length_56205_cov_41.4687 . gene 42035 45938 . + . ID=g11889;Name=g11889.t1 NODE_34_length_56205_cov_41.4687 . mRNA 42035 45938 . + . ID=g11889.t1;Parent=g11889;Name=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 42035 42410 . + . ID=g11889.t1.exon1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 42035 42410 . + 0 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 42557 42906 . + . ID=g11889.t1.exon2;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 42557 42906 . + 2 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 43169 44708 . + . ID=g11889.t1.exon3;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 43169 44708 . + 0 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 45037 45233 . + . ID=g11889.t1.exon4;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 45037 45233 . + 2 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 45431 45543 . + . ID=g11889.t1.exon5;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 45431 45543 . + 0 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 45690 45768 . + . ID=g11889.t1.exon6;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 45690 45768 . + 1 ID=cds.g11889.t1;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . exon 45906 45938 . + . ID=g11889.t1.exon7;Parent=g11889.t1 NODE_34_length_56205_cov_41.4687 . CDS 45906 45938 . + 0 ID=cds.g11889.t1;Parent=g11889.t1 #PROT g11889.t1 g11889 MASRPSRGGGDAVSVASSEGSRKSDTVPSGGSALTGGSGGQGGGDAAAAGAGAAGAGTAGGDVRRKKRGILKSYYGVSKGKDSKPVIGDPLDINSGAFDADMFVKKMLKEKNQPELMSKDSAMRGELKRLDSEVQTLVYENYNKFISATDTIRKMKNKVDGMEEEMNRLASNMAEITSNSDHINKVLSDKNMKIQKLAGIHSLLFKLQFLFELPSRLKKCVEMKAYAQAVEYYSKATGILHQYEHLPAFRGIQADCKQIVGDLARLLKQKLNNPKSTQAEVAECIDLLLGLRESPGDLSDQFLSSGKGRIDAGIAELKRRAQLPDALVEFVAFASDTLFADVAEVAGAFRRLFLDRLAKAVTATAVQTAAQTASSGANASSRAPQQSQQGGKDVRGGKAGAASLASGAQASRGSDAVTSAPVSVEEQRLTTFVDTAMRAIFDCVREKIGRDIGTANNTSVVQAIERFYADSVKIDKIVPRAKLKATAAAIVRECVRMRVVSYQAQLEKHFGDTIASLRTNLAMLPRGGGPVLSAGAAILEEAHRPPLLELLQRTTATLSDRMKAALIEVQAYAIAGFANAIDAVRGDLEGDIVRRDVLQRHLTLMNDRMAEYADANKSVGDSAPSSLLVVLARLCLNFESTTIAFLVGISGELFPLGMSGSGGAVVRKDGDSVAIRDIIKKYKSTAQLLLDRYVQREGLSMSRMLRQSVETKDWRSALEPQSVRPAMRRVVEEVRVLESEVGQLYEDDPNRSRSSDSGRRPVTSKQPLVDRRRPSFAAGSQINANLMNNIQKLFSERVEVFGPVEFTRNSIVTGIIKIGLKTFFESIRLRTFNKYGYQQVQVDAQYLKAKLHKYAEDEGAVASLLEEVVSSTINRCLDPSPMDLAAIDNVVAKEP* # PASA_UPDATE: g11886.t1, single gene model update, valid-1, status:[pasa:asmbl_6148,status:3], valid-1 NODE_34_length_56205_cov_41.4687 . gene 24850 28029 . + . ID=g11886;Name=g11886.t1 NODE_34_length_56205_cov_41.4687 . mRNA 24850 28029 . + . ID=g11886.t1;Parent=g11886;Name=g11886.t1 NODE_34_length_56205_cov_41.4687 . five_prime_UTR 24850 25076 . + . ID=g11886.t1.utr5p1;Parent=g11886.t1 NODE_34_length_56205_cov_41.4687 . exon 24850 28029 . + . ID=g11886.t1.exon1;Parent=g11886.t1 NODE_34_length_56205_cov_41.4687 . CDS 25077 27971 . + 0 ID=cds.g11886.t1;Parent=g11886.t1 NODE_34_length_56205_cov_41.4687 . three_prime_UTR 27972 28029 . + . ID=g11886.t1.utr3p1;Parent=g11886.t1 #PROT g11886.t1 g11886 MHSILSHSAAHPLETMGRRRPRMHATDRGLGLHRGRFALFAAAALCCVMIPIALHRYGMYETKINSGTSGAWRNEHIPTANADHHDGLDVESSEGSFFAAIIPSGRVLFALVAAVPIAIALGPTRKWLLQGAHAALLVGVLAGTPWLALCVYDACTSAFWALFALILNRMDAEEALACLWLASSAVLARYVTNGARTLLTPAMLPLWIANCGAGYMRIYRQLVPQNYRWLAQSQFRALEAFAVPIGICYVTLRHGVLLSLWLAAVIVPSVLVISCAMLVAVSANAVVPVCAVALRLPRGVPRWFARGVRQGNALSTESLGAILRRLLPGQSDERAVHGAGEAVNALRASLWALLDRCSYEIADAMNVIDSSFTAWHSLLRSWSSTLATRFSELRNTVQSRPQYHIAAWRARESPPAMERMQSHMQEAGMVVCQIIFVWMPLLLIASAAWGGISWTAVVVLPRVIDFVAVIAAFMPALHLPQPDLLVRPLIVLPSTALRLVHMVVRIQWRAESQPEDDESTQRARRAYKAAVASFDAWLLQLFKSLAITAGMAVGFCDAYTHTYEGDADALGRLSPETDGDNGRDDTTTESDMEDNDIEPTPYGRLTCASCDGETQALPLCTFPHFLCSDCAINALQRCLEQGNATCPFASGNNPCRVREDAVWSVDIALGTDDEGHGVALEFIHQMRYGTYLQPSANDNNPQARRLTRIQMERLSMLAKHENDRRRVGYGVLTIDSFQPPEDVQAGGAASHVHAAWVAVDRSDRTPRPMTCGRPGCTVAVCAQCTRPWARHVGLMCADMERVVDGGRRRSQLEVVAGIEWADVPVNVNAPVAPPRIAGFVPCRTEGYAEIQGNEIFRTVPVAHAWEVHDAGGELNDGGINREGEELAGTEHVPTPLLYKPCPECHMPVQHERNNGCHHLTCPECTTQWCWVCNGRWFLPDRTARRCTCPMTCSPTCTECPPRNT* # PASA_UPDATE: g11887.t1, single gene model update, valid-1, status:[pasa:asmbl_6144,status:3], valid-1 NODE_34_length_56205_cov_41.4687 . gene 30692 32880 . + . ID=g11887;Name=g11887.t1 NODE_34_length_56205_cov_41.4687 . mRNA 30692 32880 . + . ID=g11887.t1;Parent=g11887;Name=g11887.t1 NODE_34_length_56205_cov_41.4687 . five_prime_UTR 30692 31001 . + . ID=g11887.t1.utr5p1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . exon 30692 31632 . + . ID=g11887.t1.exon1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . CDS 31002 31632 . + 0 ID=cds.g11887.t1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . exon 31910 32133 . + . ID=g11887.t1.exon2;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . CDS 31910 32133 . + 2 ID=cds.g11887.t1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . exon 32355 32486 . + . ID=g11887.t1.exon3;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . CDS 32355 32486 . + 0 ID=cds.g11887.t1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . exon 32688 32880 . + . ID=g11887.t1.exon4;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . CDS 32688 32855 . + 0 ID=cds.g11887.t1;Parent=g11887.t1 NODE_34_length_56205_cov_41.4687 . three_prime_UTR 32856 32880 . + . ID=g11887.t1.utr3p1;Parent=g11887.t1 #PROT g11887.t1 g11887 MSVSESIPGDEFPPDCSFDIAKIVGYSGLLWHKLGYVRAAARIYMQLVRWERPPWQSASALCIGVLVCLYPHVVVGIFAVVPALLVAKEALVARAYRKNKWSTLPKITHRDFIPQAKLNTVTGILDDSESLTELMRVYRRRLRAAQGALSAACDALDSAWSACVKPTVASAARATACIMCVMILTLSLPLTWLAALVWTHQFVRWTRPYVAVSHTFGSILGSRVKIYKQSATAVSSVQTKATGAGAPVVQVTAAVQRPSTVTVDAVGSKASTPTVNATVDPPPIEVPVVSKRPIRAKIEEIRSELRRRQTQNAGNCASCHSSFGILNKRQCCSYCGVAYCSTCCASLVTRAMLGATSPAAFEETVNVCDACYETITGHKIDQGR* # ORIGINAL: g11893.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 54503 56120 . + . ID=g11893;Name=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 54503 56120 . + . ID=g11893.t1;Parent=g11893;Name=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 54503 55067 . + . ID=g11893.t1.exon1;Parent=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 54503 55067 . + 0 ID=cds.g11893.t1;Parent=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 55382 55496 . + . ID=g11893.t1.exon2;Parent=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 55382 55496 . + 2 ID=cds.g11893.t1;Parent=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 55943 56120 . + . ID=g11893.t1.exon3;Parent=g11893.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 55943 56120 . + 1 ID=cds.g11893.t1;Parent=g11893.t1 #PROT g11893.t1 g11893 MFRIVFTLLVATAAYLAGNAPWDLSLAPLAPTTAAQHADANAHNALDALDAVNPFIGETAVPSQAENDTPHGSSLGSIEVASGVGGDSLHAYVHGDDASATLSQPVVNVEKAIKVAPPSSSNGDDSTGKESPVVERDAASKKAPMKDGEGEQCSARASPADPPRRPGQSGPLDEGMKGFLAWFKTVAGARANGVSVGSFGAYGNGILARRNIDEDETVLSVPLSSVICRETILVKADGADAALYKSIRADADLIAVFLMKERAKGARSWWAPYIRVGLKISFVFA* # PASA_UPDATE: g11891.t1, single gene model update, valid-1, status:[pasa:asmbl_6147,status:12], valid-1 NODE_34_length_56205_cov_41.4687 . gene 51190 52522 . + . ID=g11891;Name=g11891.t1 NODE_34_length_56205_cov_41.4687 . mRNA 51190 52522 . + . ID=g11891.t1;Parent=g11891;Name=g11891.t1 NODE_34_length_56205_cov_41.4687 . five_prime_UTR 51190 51230 . + . ID=g11891.t1.utr5p1;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . exon 51190 51381 . + . ID=g11891.t1.exon1;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . CDS 51231 51381 . + 0 ID=cds.g11891.t1;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . exon 51556 52018 . + . ID=g11891.t1.exon2;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . CDS 51556 52018 . + 2 ID=cds.g11891.t1;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . exon 52278 52522 . + . ID=g11891.t1.exon3;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . CDS 52278 52431 . + 1 ID=cds.g11891.t1;Parent=g11891.t1 NODE_34_length_56205_cov_41.4687 . three_prime_UTR 52432 52522 . + . ID=g11891.t1.utr3p1;Parent=g11891.t1 #PROT g11891.t1 g11891 MLAALTRASPVGCRLSSVVVCRRGITFGTKNKMPPPKDVVIEPKGPHKATLIFLHGLGDTGHGWEPPFEDAAIPYTKIVLPTASVQPVTLNQMFRMPSWFDIVGARDRKLETCDGIEESAQRIVQMLDRAIDVDGVASERVILGGFSQGGALSLYVGLNYPRKLGGILAISCYLPLPHELPKRLNAANKDTPILMCHGTEDDMVRFHNAEETQATLERHGVSNVQFYKSSLGHEVDDEVLATMSAFIASRVADAK* # ORIGINAL: g11885.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 22944 24302 . + . ID=g11885;Name=g11885.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 22944 24302 . + . ID=g11885.t1;Parent=g11885;Name=g11885.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 22944 24302 . + . ID=g11885.t1.exon1;Parent=g11885.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 22944 24302 . + 0 ID=cds.g11885.t1;Parent=g11885.t1 #PROT g11885.t1 g11885 MASQYLVTAANCPTSEESPVPTLLQLSALETLGESFEDVPGVWFFNDEVDAMGDDWSLRKSLSLWLERVPMFAGRISKRHGERLAVRVCNSGVPFEVIHSPPLRCNITDDASAANACRFAPRLKATEGSPLVCVRFVKFGKGNGCAIAATLLHCVSDAYTTFHFLKHWANVHRAMLSCAPPPVIDVCIDRSAQDSGVNPIVFSPLSPGKMLRQLTLFQGIALTARILWDLPWLGASYAVLSADDVDRMRRTASEGLPDGRRVSTNAAITSFLLRECFKVQGLAGDGQPCAAVTAINVRSRRKAVPTNYFGDAIVLHPHHFASAAEIQTSPLSTVASALYESYSSVDDATIAQEGAWVDAALREAGSCGRVFLNAELGRVCMFSNWTTFPVYDCDFGGGEPYAYVPIAPPFVNSFLIGPAPRLYGDGAIVIGMQNKSRTRNALRAAIAAALAT* # ORIGINAL: g11880.t1 original gene structure, not modified by PASA NODE_34_length_56205_cov_41.4687 AUGUSTUS gene 881 8287 . - . ID=g11880;Name=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS mRNA 881 8287 . - . ID=g11880.t1;Parent=g11880;Name=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 8198 8287 . - . ID=g11880.t1.exon1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 8198 8287 . - 0 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 7902 8012 . - . ID=g11880.t1.exon2;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 7902 8012 . - 0 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 7652 7750 . - . ID=g11880.t1.exon3;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 7652 7750 . - 0 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 7280 7368 . - . ID=g11880.t1.exon4;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 7280 7368 . - 0 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 5319 7129 . - . ID=g11880.t1.exon5;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 5319 7129 . - 1 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 4854 5069 . - . ID=g11880.t1.exon6;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 4854 5069 . - 2 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 4554 4621 . - . ID=g11880.t1.exon7;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 4554 4621 . - 2 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 4108 4283 . - . ID=g11880.t1.exon8;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 4108 4283 . - 0 ID=cds.g11880.t1;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS exon 881 3863 . - . ID=g11880.t1.exon9;Parent=g11880.t1 NODE_34_length_56205_cov_41.4687 AUGUSTUS CDS 881 3863 . - 1 ID=cds.g11880.t1;Parent=g11880.t1 #PROT g11880.t1 g11880 MEVIGTSTPSSVLSPAHEKNGGISIDRDDEIRVDGQRVLWIRHGVLQKALTFDAPVLHVVWTRFNRENEEVVWSLCIAHRDALTILDIDGRTNTVPLPFEPMSILPLDRGLILARSPRSSRLATAPLLYTLEAPLRELQPIQFAEGEAPLPSHRLIFCGDSLSHSNVPIAATWCPTSRTVTAYEISAIRASARPSVGTLNPDGFGMSLSPARRARRVHAEAAPPTGTGSNTPPEVVLVAEDMRGWLYIVRRGASCSVLPLTVAVESRGSALPSTRVVTFGTPTVMSGIASVACVASEGCVLFRAADNDANLTNRGRSRESACAVRASLALVVMDEGSMKVMRGTETVVTLDGQFVVGATAGAMGGRTSGAVRFVAGSNDGSSVAAFRPHSLVSAAGDRVTIVCMPAGASSGAAGTGMDAAAAAVAVAQTERMCVRVRLTVTPRSSLGRRCLGAMRAILSLDEYALFQSAVCTHAVSLRHQRHPWCAAIDSAQMPDFARDGVMAAFTCLTMGNGGGCAVCSKVGGNQSGTDAPSHARVDSLADIIERALGESRDPGDSAWKALIASSLATGMSSSIHSDAAILLDSTGTGVTGGSTEPGRLQTPVIQQSQQTRPASHTQLLFLQRLVFVMHLVYEDAKLDAAMAKTLPYLGGPLLRAAAHLGLHAYADSYVRDLALASPPASHANPSGTCHVATDPPSVYAHIESAVRRTSGEPAATAFPSAVVQRGGDADGADDGLWLSSAVTRVFSAWADGPEAVVMEMARAGMHPGVDLDRLCPALSLPLRSAINQCAASPRMHWPSRVLCLIGRTDMAALIGGPTPAPRDAPAEHDVSRLPPSDTTARVDGTADLLSSDFRRRFPKDRRIEEAMRMLRSSVPIQLTLLQKPEMSDHDFIVEQQAQLLQFLQRALALSVGRGMLTLSTTLPEMGEQLVVPPLIMTGVSAVIGPSGNPAAITLEASALPDAMLGWPSFHNGVASSLRLMRPVGYFPAEAHTMAARRASAGVTGSTVSSTWIVYNRTGGTDGHAGFLLGLGLQGHLPALATANAHDYLRVGHEFTSIGILLGLAASKAGSCEPAVTRMLCLHIPALLPPSSAEVWVSWGVQTASLLGVGLLFRASANRRMAEVLLDEIGRLPGSDASTDRDSYSLTAGLALGLVTLGRGSHAAGLSDLRLVDRLRRYMDGGKVDMSSLGAHSAHGRGAYAQGTGGLAALASLVVGDMGSSSSAQVGTATAAGASARQRTGPQWIDEGDRINVTMTAPGAMLALGLMYHRTSDALVADVLALPATLSLLESIPPYHVTVRVLARSLVAWEAVAATPEWVFSQVPALSLDAARESGVLKERDVVVGTAAPSLFADAENASAAPPRKKHKAMSVGDQETLLAVFCRAVAGACLSVGLRYAGTAAEGPARYLAQWVRHLERVAASRASNNRAFAAGVVQCVDICALALACVLAGTGDVDCLRLLRRARARPCDSNTRYGNHMAVGMATGLLFLGGGMWAVGRTPEATASLVCALYPIFPLNPKDNRYHCQAFRHLYVLAAEYRALVARDSETGAAVAADVVVRMVQGADSVATFGRDGRSVEDGRVVIKATTPCILPEFSSIHSIEVVPRRSTEPDGPLPVLPLCILADSDAGRNLAKSRTLYVRRPSRPTVNPRTLAFGASTVHSQREAPAASLACIAHQPHAVLANALRGTAPPSSSLAAFAESVLSADDDVRTSVHGMDSDSFSFVAWLYRAVTASVGGRGDGPPHVLGLLRIVTSARKSRPLPPDVSDAIDAAEFVVNNAVRASGAGSDLANDVRQYVLEGHVPADYARRRKAMAFVVLHSIPRIVEAAASLSLRASLEGGGSEGELASSAGVRMEALVRAMTAAGAPADGVGVLARLIV* # ORIGINAL: g1294.t1 original gene structure, not modified by PASA NODE_3930_length_2499_cov_34.8395 AUGUSTUS gene 271 1575 . + . ID=g1294;Name=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS mRNA 271 1575 . + . ID=g1294.t1;Parent=g1294;Name=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS exon 271 318 . + . ID=g1294.t1.exon1;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS CDS 271 318 . + 0 ID=cds.g1294.t1;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS exon 624 761 . + . ID=g1294.t1.exon2;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS CDS 624 761 . + 0 ID=cds.g1294.t1;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS exon 871 1025 . + . ID=g1294.t1.exon3;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS CDS 871 1025 . + 0 ID=cds.g1294.t1;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS exon 1212 1575 . + . ID=g1294.t1.exon4;Parent=g1294.t1 NODE_3930_length_2499_cov_34.8395 AUGUSTUS CDS 1212 1575 . + 1 ID=cds.g1294.t1;Parent=g1294.t1 #PROT g1294.t1 g1294 ESLPTEVPAEQFDAGKKEEVVIAVEELGNIKDVVEALSSESVLKPERTDIEELKEERKDYKEELKEMKAQSPDIKEDTATSRLDKRMEKIIGRLEKQIEKAEVDLNKAADASERLRALIDQDHDRRITTAELSQALGLMRNAPSEEKKQLLIEILDIDKDGEVSVDEIISVVTLLEKEDADVSAEDIKRLFAMLHSEHAVERLDDKRDIESKIDRMAERVKQLRRTAKTDAPIQ* # PASA_UPDATE: g4837.t1, single gene model update, valid-1, status:[pasa:asmbl_4480,status:13],[pasa:asmbl_4481,status:12], valid-1 NODE_2515_length_6034_cov_35.9545 . gene 3278 5974 . - . ID=g4837;Name=g4837.t1 NODE_2515_length_6034_cov_35.9545 . mRNA 3278 5974 . - . ID=g4837.t1;Parent=g4837;Name=g4837.t1 NODE_2515_length_6034_cov_35.9545 . five_prime_UTR 5974 5974 . - . ID=g4837.t1.utr5p1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . exon 5741 5974 . - . ID=g4837.t1.exon1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . CDS 5741 5973 . - 0 ID=cds.g4837.t1;Parent=g4837.t1;5_prime_partial=true NODE_2515_length_6034_cov_35.9545 . exon 5195 5359 . - . ID=g4837.t1.exon2;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . CDS 5195 5359 . - 1 ID=cds.g4837.t1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . exon 4789 4895 . - . ID=g4837.t1.exon3;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . CDS 4789 4895 . - 1 ID=cds.g4837.t1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . exon 4471 4539 . - . ID=g4837.t1.exon4;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . CDS 4471 4539 . - 2 ID=cds.g4837.t1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . exon 3278 4097 . - . ID=g4837.t1.exon5;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . CDS 3922 4097 . - 2 ID=cds.g4837.t1;Parent=g4837.t1 NODE_2515_length_6034_cov_35.9545 . three_prime_UTR 3278 3921 . - . ID=g4837.t1.utr3p1;Parent=g4837.t1 #PROT g4837.t1 g4837 VHINLKQQGKKLEHNGIKVEFVGQIELFYDRGNHHEFVTLVKELSPPGDLSRNVTYPFEFTNVEKQHGSYNGINVRLRYFVRVTIVRRLSDVVKELDLWVHQLQDLPDMNNSIKMEVGIEDCLHIEFEYNKSKYHLRDVIVGKIYFLLVRIKIKHMELAIIKKESTGSGANLYHENETVTKYEIMDGAPVRGESIPIRLFLAGFDLTPTMKDIHKKFSVRYFLNLVLIDEEDRRYFKQQEITLWRKKSN* # PASA_UPDATE: g4836.t1, single gene model update, valid-1, status:[pasa:asmbl_4478,status:12],[pasa:asmbl_4479,status:12], valid-1 NODE_2515_length_6034_cov_35.9545 . gene 455 3208 . + . ID=g4836;Name=g4836.t1 NODE_2515_length_6034_cov_35.9545 . mRNA 455 3208 . + . ID=g4836.t1;Parent=g4836;Name=g4836.t1 NODE_2515_length_6034_cov_35.9545 . five_prime_UTR 455 814 . + . ID=g4836.t1.utr5p1;Parent=g4836.t1 NODE_2515_length_6034_cov_35.9545 . exon 455 3208 . + . ID=g4836.t1.exon1;Parent=g4836.t1 NODE_2515_length_6034_cov_35.9545 . CDS 815 2545 . + 0 ID=cds.g4836.t1;Parent=g4836.t1 NODE_2515_length_6034_cov_35.9545 . three_prime_UTR 2546 3208 . + . ID=g4836.t1.utr3p1;Parent=g4836.t1 #PROT g4836.t1 g4836 MASPAAHAVHGSMRTPQEAPFSFLLITSNVGSIFDDPLVTLKNWIEEIVCLIEREQPDFVAVHFQEIGGKHYKDNLKEIDPFFHAFNTRCASLVHAYRRAAFMCERNWQNNDRFTALGSAYYVKETIADHTRAWDFASSCYTALSDPALNDATSHERFAMHEKFPPSEFGPESKSRKGFMRTRWSVCDIELDLVNVHLFHDDSNIVAFEHSPSIYARNRQRALTHVVRRCCTMNGAAGSANNNNNPHTPPAHAPAPSTPTRALTNATDAPAPAPAPHTPSRRAFAPSASPHSPLTHHGEAPVAFAFAPAAATTVVGDPPSSNSAVVASEPLTHGSTVPLFLFGDFNFRLDMQGAVRYISRGGSEPQRVRNESGEETRYIYRDAIKADPLLTFGARLFSTRSPQRFLERGGEEFRHFDIEPSLVFGALGVVEMPVCFPPTYPYSETDGEGSVFLERRCPSWCDRILMNNPAKSLVLGMLRASSSTGSASVGSDAGSRSPSHQQQQQQPQQQPQQQPQQQQQQQLGQHSPIHAQLTPGAHVDGSAGVSVAIPRGPVYTSVAQNVCVGDHKPVYLSFAA* # PASA_UPDATE: g9321.t1, single gene model update, valid-1, status:[pasa:asmbl_740,status:3], valid-1 NODE_1197_length_13185_cov_39.1314 . gene 5014 7157 . + . ID=g9321;Name=g9321.t1 NODE_1197_length_13185_cov_39.1314 . mRNA 5014 7157 . + . ID=g9321.t1;Parent=g9321;Name=g9321.t1 NODE_1197_length_13185_cov_39.1314 . five_prime_UTR 5014 5510 . + . ID=g9321.t1.utr5p1;Parent=g9321.t1 NODE_1197_length_13185_cov_39.1314 . exon 5014 7157 . + . ID=g9321.t1.exon1;Parent=g9321.t1 NODE_1197_length_13185_cov_39.1314 . CDS 5511 6947 . + 0 ID=cds.g9321.t1;Parent=g9321.t1 NODE_1197_length_13185_cov_39.1314 . three_prime_UTR 6948 7157 . + . ID=g9321.t1.utr3p1;Parent=g9321.t1 #PROT g9321.t1 g9321 MHPRIAVVGAGLGGLTFARVLHVHGIGCTVYESEASPHARNQGGTLDLHEESGQFALREAGLWGVIQPHLRPEGEDLIMCDKYAKVLWEERDGVQLVGGPPAAGDNVPGGIESALPPSQLSEHSCDVTMESAPSEHGPLAHSNRHNDDQNASAINTDPAVGGGGRPTRPEVDRAILRRVLLDSLPSGLVRWSSKVTSITPVSTAAPGAPVSYTLALASGEVAFADLVVGADGAWSRVRSLLSSALPFYSGISFVEMNLARVDERHPEQACLVGRGTLMALAEGQGLIAQRNGEGAVRVYAALSVPADWGSAPRDNGGIDWNDPAAARTHLLLLFNDWHPSLQALIARSDDSPPPILRPINALPCTHSWDRPSTGTGRGVTLLGDAAHVMSPFAGEGANLAMLDGAQLAKALARHVSHALPGQALWDLEAALVEYETALFPRSHVAAEESARNLTAAFAHGAPQGMIDVMLSHFGPPPE* # ORIGINAL: g9319.t1 original gene structure, not modified by PASA NODE_1197_length_13185_cov_39.1314 AUGUSTUS gene 8 46 . - . ID=g9319;Name=g9319.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS mRNA 8 46 . - . ID=g9319.t1;Parent=g9319;Name=g9319.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 8 46 . - . ID=g9319.t1.exon1;Parent=g9319.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 8 46 . - 0 ID=cds.g9319.t1;Parent=g9319.t1 #PROT g9319.t1 g9319 MARLGSSQLRRKE # ORIGINAL: g9320.t1 original gene structure, not modified by PASA NODE_1197_length_13185_cov_39.1314 AUGUSTUS gene 474 3540 . + . ID=g9320;Name=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS mRNA 474 3540 . + . ID=g9320.t1;Parent=g9320;Name=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 474 571 . + . ID=g9320.t1.exon1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 474 571 . + 0 ID=cds.g9320.t1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 851 899 . + . ID=g9320.t1.exon2;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 851 899 . + 1 ID=cds.g9320.t1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 1126 1165 . + . ID=g9320.t1.exon3;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 1126 1165 . + 0 ID=cds.g9320.t1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 1362 1432 . + . ID=g9320.t1.exon4;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 1362 1432 . + 2 ID=cds.g9320.t1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 1806 2071 . + . ID=g9320.t1.exon5;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 1806 2071 . + 0 ID=cds.g9320.t1;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS exon 2529 3540 . + . ID=g9320.t1.exon6;Parent=g9320.t1 NODE_1197_length_13185_cov_39.1314 AUGUSTUS CDS 2529 3540 . + 1 ID=cds.g9320.t1;Parent=g9320.t1 #PROT g9320.t1 g9320 MTAVTEQVHDILVRHKTPVSWGLKLRMIADAVRGMQFLHEADMLHCDLKSGNLLVDDKWNVKVSDFGMTQFGQQADSDRLGTLLWMAPEVLIGGVYSKAADQYSMGIVLWEFLHARQPYGELASSSAGGVLNHNNNTNNHTENENLGGGVGDDARGQNAAALSAILDDIVHLGLRPAITPGECPPMFLSLMEDCWDTDPSNRPTFAQIALRIDAMVRDYMAADAESMPSSFAFVISPRPPKAVSASTLLSIGDSTAPSGSATPFKAGDGGSVATSRGGCFMIEDADAAVTSDASLRDADDADDDALFGVPEVDAVGALSVDRQSVTSGERGRGGGMAVVRKKATRQFVAFDSQCGIALHAGAAADTAAVHAYPWAHVIGCRLIGPAQIADAWVTSHSAQHGQHSHLTSLGGNRMSSTNSVMSISEPSPASLLSSSSFVVAFFTHASGGKQRRVPPSPDALVIPSVRSLRFTPVDSQDAYSWWAWIDARVRQSQRQLRAPQPEVKELPTTEL* # PASA_UPDATE: g9322.t1, single gene model update, valid-1, status:[pasa:asmbl_738,status:3], valid-1 NODE_1197_length_13185_cov_39.1314 . gene 7123 9156 . - . ID=g9322;Name=g9322.t1 NODE_1197_length_13185_cov_39.1314 . mRNA 7123 9156 . - . ID=g9322.t1;Parent=g9322;Name=g9322.t1 NODE_1197_length_13185_cov_39.1314 . five_prime_UTR 8959 9156 . - . ID=g9322.t1.utr5p1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . exon 8905 9156 . - . ID=g9322.t1.exon1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . CDS 8905 8958 . - 0 ID=cds.g9322.t1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . exon 8695 8786 . - . ID=g9322.t1.exon2;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . CDS 8695 8786 . - 0 ID=cds.g9322.t1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . exon 8409 8493 . - . ID=g9322.t1.exon3;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . CDS 8409 8493 . - 1 ID=cds.g9322.t1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . exon 8002 8175 . - . ID=g9322.t1.exon4;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . CDS 8002 8175 . - 0 ID=cds.g9322.t1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . exon 7123 7517 . - . ID=g9322.t1.exon5;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . CDS 7461 7517 . - 0 ID=cds.g9322.t1;Parent=g9322.t1 NODE_1197_length_13185_cov_39.1314 . three_prime_UTR 7123 7460 . - . ID=g9322.t1.utr3p1;Parent=g9322.t1 #PROT g9322.t1 g9322 MAFNRGLYFFIVFSSLSMIGWICFVIGFIRENQRNGSQYWSVSVENFCWYAYGVTGLGGYVFILLFMIFRKTPLLMIALWLSAVGSVFAGAPLNESGRFIYRCKRGKLPDGDCAGSGYHNQSLMFSGTLAFAIFFGISLAFLPQSVISKISPY* # PASA_UPDATE: g9323.t1, single gene model update, valid-1, status:[pasa:asmbl_739,status:12],[pasa:asmbl_741,status:12], valid-1 NODE_1197_length_13185_cov_39.1314 . gene 9460 12384 . + . ID=g9323;Name=g9323.t1 NODE_1197_length_13185_cov_39.1314 . mRNA 9460 12384 . + . ID=g9323.t1;Parent=g9323;Name=g9323.t1 NODE_1197_length_13185_cov_39.1314 . five_prime_UTR 9460 9650 . + . ID=g9323.t1.utr5p1;Parent=g9323.t1 NODE_1197_length_13185_cov_39.1314 . exon 9460 11421 . + . ID=g9323.t1.exon1;Parent=g9323.t1 NODE_1197_length_13185_cov_39.1314 . CDS 9651 11421 . + 0 ID=cds.g9323.t1;Parent=g9323.t1 NODE_1197_length_13185_cov_39.1314 . exon 11600 12384 . + . ID=g9323.t1.exon2;Parent=g9323.t1 NODE_1197_length_13185_cov_39.1314 . CDS 11600 12192 . + 2 ID=cds.g9323.t1;Parent=g9323.t1 NODE_1197_length_13185_cov_39.1314 . three_prime_UTR 12193 12384 . + . ID=g9323.t1.utr3p1;Parent=g9323.t1 #PROT g9323.t1 g9323 MTPPYSWRSVCALVVLCVAHAAVAVRTSHKCIASDVIRAEDILPNNVDYEPPERRRALGDIAPGYDNIRIKSFLINDTDITDTNLYNFLVTKLVPASVAVLTNALHVVPASSNIKVERDCISYYASGVNKGKCAGATATATCGRNSDSTVFVNVPSAHVAGPEVCSSSTNAGSCSYQAGGAGVAGADLVLYVRSKFTPNACVPGGYVLAYAAPCRKDQLDRTVAGYINFCPDRLSADPNDWDDQVATAVHEMMHVLGFSSYGFAYFRDENGTPRTTRDGLGNPPVSNGAYVAGSSTVGTFTERGGTVKKLVTPAVVREARAHFGCSTLNGAELENQGGSGSAISHFEMRVFESDYMTSTSTPTSYISRILLAVFEDSGWYKVNYTAASPYFRWGKNAGCNFAMDKCLQGPKSFPTPVDAGHFCSASTEGCAPDGLYAARCSVSSNMGSIPAEMQYFTSSSRGGIYSSADYCPMFLAYQDCRTSPGSAPNALTGQSYGAGSRCVVGTQSDASGQRGYCVARRCVKYDTDDVLVQVRLSGNGVTSDWLDCPPGTVVTHSNFIVSLQCPSPDVLCFDSTTITLPKPNVTATVSATVSPTVGPVAGTPVATNLAIQSADPRAAAVADAFVRYLAARGSGQSLTLASIVSTTLVKSGGSSSTYSVTVTVTISTGETLEYSATVTAYGPASSPSSFTINNVAYQGPPDTASAKESTPLVKEKWFIAVVVACACAVVVVAGVLFGLTVAKHNARRVQPSAPQQPMIFQAPVHTVHTAPPAFPGGEKDPPMYSAV* # ORIGINAL: g579.t1 original gene structure, not modified by PASA NODE_3075_length_4386_cov_37.46 AUGUSTUS gene 499 1500 . + . ID=g579;Name=g579.t1 NODE_3075_length_4386_cov_37.46 AUGUSTUS mRNA 499 1500 . + . ID=g579.t1;Parent=g579;Name=g579.t1 NODE_3075_length_4386_cov_37.46 AUGUSTUS exon 499 1500 . + . ID=g579.t1.exon1;Parent=g579.t1 NODE_3075_length_4386_cov_37.46 AUGUSTUS CDS 499 1500 . + 0 ID=cds.g579.t1;Parent=g579.t1 #PROT g579.t1 g579 MSLVEYSSDECVEDNGVRVDDAGGITTTSNESPDCGRAVKRRRTTHNAAHIPSTTVSNSEKEPPAASSSVTALQAAAADEQPSLPSVGITAEVRAHKSDTDVCAATATTAIATTATTATTAAAPLLVVAAPARCFPHADGSWAMHVYVPVVLSHAALDVLRTAVDDCASIACAGVGPIVAVAPAEYHVSVSRTVPIRYPLIAPFVDRIASAVRSHQAFEGRLGPLARYPNDNGTRAFAGASVSAGKDSFRGLSAAVDAVMRAFALPEYYDEGAFHVSVAWIAAPEFPPISADIAADYEYGAAATGWLPFQANRVCVRAGNRRFECPLARGRPA* # PASA_UPDATE: g580.t1, single gene model update, valid-1, status:[pasa:asmbl_5519,status:12], valid-1 NODE_3075_length_4386_cov_37.46 . gene 2140 4386 . - . ID=g580;Name=g580.t1 NODE_3075_length_4386_cov_37.46 . mRNA 2140 4386 . - . ID=g580.t1;Parent=g580;Name=g580.t1 NODE_3075_length_4386_cov_37.46 . five_prime_UTR 4385 4386 . - . ID=g580.t1.utr5p1;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . exon 3953 4386 . - . ID=g580.t1.exon1;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . CDS 3953 4384 . - 0 ID=cds.g580.t1;Parent=g580.t1;5_prime_partial=true NODE_3075_length_4386_cov_37.46 . exon 3126 3704 . - . ID=g580.t1.exon2;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . CDS 3126 3704 . - 0 ID=cds.g580.t1;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . exon 2140 2777 . - . ID=g580.t1.exon3;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . CDS 2565 2777 . - 0 ID=cds.g580.t1;Parent=g580.t1 NODE_3075_length_4386_cov_37.46 . three_prime_UTR 2140 2564 . - . ID=g580.t1.utr3p1;Parent=g580.t1 #PROT g580.t1 g580 NTHTHTNTAARVYNVNEHTKGPDFIHDEALLQLIEREVERRVIARFEVNGGTGASGAAGAAGGGVSQRDMDRRKYPVVKYLNAAERKRILVTGGAGFVGSHLVDVLMLQGHEVMVVDNFYTGRKQNIDHWIGHPNFELFNHDVTESLFLQIDQIYHLASPASPPHYQYNPIKTIKTNAMGTLNMLGLARRVGARLLLASTSEVYGDPEQHPQKETYWGHVNPIGPRACYDEGKRVAETMCYAYAQQEKVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGEPITIYGTGEQTRSFQYVSDLVDGLVLLMNSNYTQPINIGNPDEYTILDFAKMIQRIVSPQTPIKFLSAATDDPQKRQPDITRARTILGWTPKTPVPVGIQRTIEYFRKELHLDGDGKSDVDDPR* # ORIGINAL: g13412.t1 original gene structure, not modified by PASA NODE_3176_length_4099_cov_39.4252 AUGUSTUS gene 1 655 . - . ID=g13412;Name=g13412.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS mRNA 1 655 . - . ID=g13412.t1;Parent=g13412;Name=g13412.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS exon 1 655 . - . ID=g13412.t1.exon1;Parent=g13412.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS CDS 1 655 . - 0 ID=cds.g13412.t1;Parent=g13412.t1 #PROT g13412.t1 g13412 MPQRRVERATRIAELAKSRGIDLDAAFNFNKEDYADRDEGDDAKHTQKTKYKDPERLVTVTTVSDMKLNDDSDGDGDGDDGSEASDVGSDASDVDSDDGDRIKSGGKRSADSRDDDRPAKVRRTDASTPSSAKKSSSASKTTPQPTPTPKPKKKTFKKTKGNLTGKKNKNLKLVGRGAPKRGKDAARGGRGGSSRGGSAAGGRGGSAAGGRGGSATGG # ORIGINAL: g13413.t1 original gene structure, not modified by PASA NODE_3176_length_4099_cov_39.4252 AUGUSTUS gene 2427 3880 . + . ID=g13413;Name=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS mRNA 2427 3880 . + . ID=g13413.t1;Parent=g13413;Name=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS exon 2427 2513 . + . ID=g13413.t1.exon1;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS CDS 2427 2513 . + 0 ID=cds.g13413.t1;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS exon 2665 2730 . + . ID=g13413.t1.exon2;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS CDS 2665 2730 . + 0 ID=cds.g13413.t1;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS exon 3240 3437 . + . ID=g13413.t1.exon3;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS CDS 3240 3437 . + 0 ID=cds.g13413.t1;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS exon 3791 3880 . + . ID=g13413.t1.exon4;Parent=g13413.t1 NODE_3176_length_4099_cov_39.4252 AUGUSTUS CDS 3791 3880 . + 0 ID=cds.g13413.t1;Parent=g13413.t1 #PROT g13413.t1 g13413 MDNYVPIKVIGKGSYGEVLLVRHKKDLKKYVLKKLNLQNASAKEQKSAEQEAKLLSQLRHPNIVAYKESFQCEGFLYIAMAYCEGGDLYTLLKARKGELLPEENVIEWFVQIAMALAHLHERNILHRDLKVGSLQLCREEARATGC* # PASA_UPDATE: g3288.t1, single gene model update, valid-1, status:[pasa:asmbl_591,status:12], valid-1 NODE_1155_length_13479_cov_43.5771 . gene 9582 13332 . + . ID=g3288;Name=g3288.t1 NODE_1155_length_13479_cov_43.5771 . mRNA 9582 13332 . + . ID=g3288.t1;Parent=g3288;Name=g3288.t1 NODE_1155_length_13479_cov_43.5771 . five_prime_UTR 9582 9594 . + . ID=g3288.t1.utr5p1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 9582 9943 . + . ID=g3288.t1.exon1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 9595 9943 . + 0 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 10046 10158 . + . ID=g3288.t1.exon2;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 10046 10158 . + 2 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 10299 10585 . + . ID=g3288.t1.exon3;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 10299 10585 . + 0 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 10980 11092 . + . ID=g3288.t1.exon4;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 10980 11092 . + 1 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 11313 11425 . + . ID=g3288.t1.exon5;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 11313 11425 . + 2 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 11609 11757 . + . ID=g3288.t1.exon6;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 11609 11757 . + 0 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 11940 12093 . + . ID=g3288.t1.exon7;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 11940 12093 . + 1 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 12336 12473 . + . ID=g3288.t1.exon8;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 12336 12473 . + 0 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 12737 12822 . + . ID=g3288.t1.exon9;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 12737 12822 . + 0 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 12939 13047 . + . ID=g3288.t1.exon10;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 12939 13047 . + 1 ID=cds.g3288.t1;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . exon 13281 13332 . + . ID=g3288.t1.exon11;Parent=g3288.t1 NODE_1155_length_13479_cov_43.5771 . CDS 13281 13332 . + 0 ID=cds.g3288.t1;Parent=g3288.t1;3_prime_partial=true #PROT g3288.t1 g3288 MYLIAAICRISREASRTLSPPLSPHGAVVLASASIASSPSSPERHLYSTFSKANMERQAPEGFDTVTEGKASILFPKSGEVFYNPVQQFNRDLSIAVISTFSSLYANEFAKLRKKQERLTRHISSTKQNAAQSTGDGEERVETEDEGDGIAMDTSGNEVDSVAAAAAEATHGSAASSSPPSTVTVGPGIVIFEGLSATGLRALRYAKEIPGVQKVIANDLSRNAVAAIQRNVEFNGVSVEKVVPTHGDASLAMYNSRLGVPFDVVDLDPYGSAAPFMDAAVQAVSEGGLLCVTCTDMAVLAGNHGEAAFAKYGSLPLKMQACHESGLRVLLASLQMNAARYKRHIVPLISCSIDFYVRVFVRVYTSAANVKRTASQLAHVYQCCGCEGFYMSPVGKRVETPRSRKYTPGTAPQIGDKCKECGTTYHIGGPLWNEPIHDAAFLDALMSHIDSKTEADYKTKSRMEGLVTLVREELLDAPLYMRLPMMSGMVHCNNPPLAIYRSALLSLGYRVSGSHCHPEAIKTDAPMGVQWDILRAWTKTHPVKARGANSIATK # PASA_UPDATE: g3285.t1, single gene model update, valid-1, status:[pasa:asmbl_586,status:12],[pasa:asmbl_588,status:12], valid-1 NODE_1155_length_13479_cov_43.5771 . gene 1 3547 . - . ID=g3285;Name=g3285.t1 NODE_1155_length_13479_cov_43.5771 . mRNA 1 3547 . - . ID=g3285.t1;Parent=g3285;Name=g3285.t1 NODE_1155_length_13479_cov_43.5771 . five_prime_UTR 3391 3547 . - . ID=g3285.t1.utr5p1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 3167 3547 . - . ID=g3285.t1.exon1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 3167 3390 . - 0 ID=cds.g3285.t1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 2663 3033 . - . ID=g3285.t1.exon2;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 2663 3033 . - 1 ID=cds.g3285.t1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 2440 2528 . - . ID=g3285.t1.exon3;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 2440 2528 . - 2 ID=cds.g3285.t1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 2163 2268 . - . ID=g3285.t1.exon4;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 2163 2268 . - 0 ID=cds.g3285.t1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 1711 2010 . - . ID=g3285.t1.exon5;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 1711 2010 . - 2 ID=cds.g3285.t1;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . exon 1 1542 . - . ID=g3285.t1.exon6;Parent=g3285.t1 NODE_1155_length_13479_cov_43.5771 . CDS 1 1542 . - 2 ID=cds.g3285.t1;Parent=g3285.t1;3_prime_partial=true #PROT g3285.t1 g3285 MAWTALCLCRLAILASLAVAVIAQCETSEVYFDVVYRDTHSGLPSSPSLRHPDFERSSYPTYTKNVVSQRLAADGKPEPANIWSLAENSRAFISPQTFYAWYHDAPFQGYESKRIDAKMKWVRVTAGSAKFASSVSSSSDGSNFFPLNGLGYGDYASNGNNYGFTTELVFKFQYKGFETFKFTGDDDFWAFIDGYLVVDLGGLHPPESATISLPPNVRTTSNTGVVQDLILVPGREYTLSIFNAERHSTGSTFYAETTLYFSPTITLETEASDNSFTVYKGQTRTVNITLRYQPDQDTNVTCFAADGSATFTPLRFTKCTTVRTLPMTVTFAKVNYVGTTVTCWANSTGIYNGIVSNTVNMISLSRVLPTFVNPPANVSVPCTGVPAFQNLTIVDDCRNSSVLTSAETSVAGTCTGRRVITRKWTATDRCGNTASYTQIVNVTDNVAPTFLTTVAPVNVACGTTIPSPVALQAVDNCGGVVTQSAVVETTAPGACPQNYTITRTVTATDSCGNAATFSYFLYPFDATVPKLSNVPSDITTTCQVVPSGSILQAQDSCSGSFFSVSPTDTIQNGSCVNTYTIFRRWRAVAQCGGVTTGEQRISVQDRDAPVLQNVPTTVSIKCSDPVPTSQVTAIDACPGTVAVTFQETRTNSCANAYTLTRTWFAKDVCGNQSPTSTQQVQVTDNVAPVLNNAPADVSVSCSAVPPVPTNITARDDCDGAPSVALAETTIAGACANRYTIQRTWTARDACGNPTSVTQRINVTDIVAPTLVGVPANVTVTCSTVPTAPTVTATDNCGSATVTYTQTRTNGRCTNAYTLLRTWTATDACGQTTTGVQRITVDDLTAPVFSSPPSTTLTAECNSIPAVPSLQATDDCNA # PASA_UPDATE: g3287.t1, single gene model update, valid-1, status:[pasa:asmbl_587,status:3], valid-1 NODE_1155_length_13479_cov_43.5771 . gene 6799 8952 . - . ID=g3287;Name=g3287.t1 NODE_1155_length_13479_cov_43.5771 . mRNA 6799 8952 . - . ID=g3287.t1;Parent=g3287;Name=g3287.t1 NODE_1155_length_13479_cov_43.5771 . five_prime_UTR 8920 8952 . - . ID=g3287.t1.utr5p1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 8689 8952 . - . ID=g3287.t1.exon1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 8689 8919 . - 0 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 8428 8539 . - . ID=g3287.t1.exon2;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 8428 8539 . - 0 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 8128 8216 . - . ID=g3287.t1.exon3;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 8128 8216 . - 2 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 7703 7818 . - . ID=g3287.t1.exon4;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 7703 7818 . - 0 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 7472 7583 . - . ID=g3287.t1.exon5;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 7472 7583 . - 1 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . exon 6799 7236 . - . ID=g3287.t1.exon6;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . CDS 7168 7236 . - 0 ID=cds.g3287.t1;Parent=g3287.t1 NODE_1155_length_13479_cov_43.5771 . three_prime_UTR 6799 7167 . - . ID=g3287.t1.utr3p1;Parent=g3287.t1 #PROT g3287.t1 g3287 MAHEGEEDIMSDNSAHIDASAALVPPLPQSGQQQNLDQMPLAMPLSSMDQVRKMLESIGLIVYADLLEAEGYDSIAALREAAEDDLLSIKVKKGHLRLLQKAAQSFPFPAGVSQSGKVPLMPKSFPPPPPARALTPAKTPGLRRRRTPEEKADMEEVKERKREEKRRRREERDRMHADKKRKRPDELMGLEDKRRRLGGMGDTPLDHVLHHAHMVAQEDEMSRKAAYPMHNGLDDRGLGRRH* # PASA_UPDATE: g3286.t1, single gene model update, valid-1, status:[pasa:asmbl_589,status:12], valid-1 NODE_1155_length_13479_cov_43.5771 . gene 4586 6700 . + . ID=g3286;Name=g3286.t1 NODE_1155_length_13479_cov_43.5771 . mRNA 4586 6700 . + . ID=g3286.t1;Parent=g3286;Name=g3286.t1 NODE_1155_length_13479_cov_43.5771 . exon 4586 6700 . + . ID=g3286.t1.exon1;Parent=g3286.t1 NODE_1155_length_13479_cov_43.5771 . CDS 4586 6658 . + 0 ID=cds.g3286.t1;Parent=g3286.t1 NODE_1155_length_13479_cov_43.5771 . three_prime_UTR 6659 6700 . + . ID=g3286.t1.utr3p1;Parent=g3286.t1 #PROT g3286.t1 g3286 MAKNSAPSAGRAQAATKAPIANTPATASAEPEVPKCCSCWEDIRYYSLGPCNHRMICHVCSVRLRSLCDMRLCPMCRTECEPVIYTRERERPYADLRQEYVVNDQKLGILFEDSAIHREVQKLFEYKCRLCDVPPEKGFKELKDHMKKMHGMHHCELCIKHLKVFNHEQRLYDRKDLVRHSKTGDPDNTSFKGHPLCEFCDKRFFDNDELLTHLRRQHFTCFLCERKDVRDRYYQEYDDLEEHFRQEHYLCEDAACLEKKFVAFDSEIDMKGHDAEVHMQSWKMSRSKSKQARAIPTNFNVNRGEDERSDRSGGSGGSNYQQQQQQQQQPQQQQRGRRYQQFQGETRAPPPQNPQHMLSTQANAPVQAPSSGSSSVRNSPPPIPSAEEFPALGGDAGGPSALSGAPASYNPASRGIGAAPQSADDFPALGGAPASAGMRRPQPTPLAGIVRATAPPTSSRPAHTVVTSSASNVVRPPAPAPVHVVPPASTPAPAYVQPPNFQERNQELIRQLKASLGPEKFGSFKTISAMFRRDDITPAAYYSQFYDLLGTQAASRIFPELVALLPDPPKQQQLLAIHKQQTGGAPASAAVVASGSTVTVETNAKNKVLIMNASKRGQGRQSAPAPRGQALQQNAWHAEQWTTCAVCGQVLLAKDATSHAAQHGLAYASNNDFPVLSSGDTSRGPYNRRW* # ORIGINAL: g5889.t1 original gene structure, not modified by PASA NODE_2263_length_7007_cov_59.9059 AUGUSTUS gene 294 6918 . - . ID=g5889;Name=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS mRNA 294 6918 . - . ID=g5889.t1;Parent=g5889;Name=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 3162 6918 . - . ID=g5889.t1.exon1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 3162 6918 . - 0 ID=cds.g5889.t1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 2704 2930 . - . ID=g5889.t1.exon2;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 2704 2930 . - 2 ID=cds.g5889.t1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 2434 2589 . - . ID=g5889.t1.exon3;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 2434 2589 . - 0 ID=cds.g5889.t1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 1896 2125 . - . ID=g5889.t1.exon4;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 1896 2125 . - 0 ID=cds.g5889.t1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 1310 1494 . - . ID=g5889.t1.exon5;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 1310 1494 . - 1 ID=cds.g5889.t1;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS exon 294 937 . - . ID=g5889.t1.exon6;Parent=g5889.t1 NODE_2263_length_7007_cov_59.9059 AUGUSTUS CDS 294 937 . - 2 ID=cds.g5889.t1;Parent=g5889.t1 #PROT g5889.t1 g5889 DKHESVAHAIYALVIEFTSSLSTELILHTLSHIENIPYSTYDFQTLNLVQRFASLALPLCASVTPDGVDAPTCGLDIFWNIVQDDAQVSRDVATTALNSFPALLWTATPLQRSRYLRMCVDNLRQSRSSFASIKLLGRLVSMQAHSIPRDPKDGHYAPAGDTAANHLTPQGSFVLALESEFGIIDAAVADIVRYKDEAVRFVVASSMDVGADGPPIDDAHVLERVYADRFKAYLASKGSHVAGIASASEGAGLLGSKSPDPIASVLASPRGASCVEGIDWDSVEISGRQTHQDHVRCRVEFLSCILSSDFSSAHLSLTQTQVGMLWDALVVRAITPDERDMALSWFETQLPLVDAAKALSPQSEVHLFGDCLRTLDFSTLRLPGYTLVRTLFSRANWRMKGYAIVNRQGIVQCADLEGVESLWRIAFEAVDPEVGREVVAFLIDLHVQVSPDIEDAVGTIRERFIDRCMAELSEASDAMHSVGGRGDSAPQVRAERALVLLRTFVDAFAAKFSGQMRLSNLKSHGASLTSESLPMVIVFVGQEGKHPIEVRSNQSLADLRADVVSLALSLAKKDSLDSPQYQISPDTEFRLVTNGKELPIESDGKPLSELGLKPGQTITTVRRMRPAADADSGHHPLASNTIHGVDPSAGAAAVAGSAFAVGGVRTFPVYILSEQRHFDRLFSILAKVSGRYAQQVWTLLMSLPTNARMLRSIARLETSPSEDAMDVAAAGGFTVHACDTRPSANDDVGAVNDVGVTHVSLLSADQWDTLLDSRSTYRLMYALQIVHATLKEEQGSNGVREQAAPPSSAARASPMDVDASSSPLSQSWSTRFVASGGLQHLVSILCSGFVGASEGLGIECMSSLQCACLALLVRTIAGFLVDPDFAVVDPSAYSESAASNTTTNNNNSNNSNNTRNLLHVEGGAFGPALVRRLVEVTWALTESSRRPSNDHSAVMSPVVRAPSVDVTCAQERLVPQAVSESHQSQSQSQSQQGQGQGQGQGQGAAGGEIDIVRQSTRLVAALCLGDASSMDALLGHTSLADWLRFTLVDAKLADVRRDIANAVYTLCAGTGAGVRSTTRSPMSVFVPLLLSMLDSLHPETQTCAEFFSLLENIVELALRGGSSTTPILDAGTLLARLSQTISRHPVVEVGNGENNIDAVLLGLLGTCATIVRAVPSLKASCGGLVESVFRECLFDIPTPTMDGNGNNSGRTQPKCKSPALRRQAFDLLAELAKGCAANFRLLLSLAIPQHYGRHRMGHWNFSPAALQRAPCGYVGLKNLGATCYMNSVMQQFYMVPSFRRAILSCEDMSEELDDSILFQLQRLFAYLQESEKKAYDTRPFCAAYKTYDGEPMNVGLQMDVDEFFNMLFDRLENLLKDTPEKTIFKDHFGGKLAQQIISRDCCHISEREEDFFAMQCEVKNKKSIEESLELYVQGEVLDGDNKYFCAQCGKHVAALKRACVLQLPRTLILHMKRFEFDMENMRRYKINDLCEFPQHLNMLPYTVEGLAEKERASGGGGSAAKTASLSAIPNYYDYELVGILVHTGTADSGHYYSYIREREPRPRIPGDPPTWLHFNDSHVEPFDPADIAMASYGGYEQVQQWDSAAQKSVARWVAKPYSAYMLFYERKEASAQQVLSPAILSSSLLGVGVRSQPGSRPLSRQHSVQTVTDHVMGGVGAGACGRTPVPVPWEILEVIHSENIEFLRDSRIFDDNNFAFMEALCYMDLPAAVLGW* # PASA_UPDATE: g1679.t1, single gene model update, valid-1, status:[pasa:asmbl_8742,status:12], valid-1 NODE_6604_length_537_cov_51.4805 . gene 1 533 . - . ID=g1679;Name=g1679.t1 NODE_6604_length_537_cov_51.4805 . mRNA 1 533 . - . ID=g1679.t1;Parent=g1679;Name=g1679.t1 NODE_6604_length_537_cov_51.4805 . five_prime_UTR 514 533 . - . ID=g1679.t1.utr5p1;Parent=g1679.t1 NODE_6604_length_537_cov_51.4805 . exon 1 533 . - . ID=g1679.t1.exon1;Parent=g1679.t1 NODE_6604_length_537_cov_51.4805 . CDS 1 513 . - 0 ID=cds.g1679.t1;Parent=g1679.t1;3_prime_partial=true #PROT g1679.t1 g1679 MLSKQMMQSMDTRFSDLITSGVVNSFEAPLPILTAAQVYPNDKNSTRPHVISFSPLSGEIAGIGGGNNTEGITAYFSTQYMGTVVNNGIPTNADQCVTNMDNLGFIVGMESAAFEITITDVVDNVCKKLIDSKTGVASYIGGNVCDDLLSFLEYKTTGSQLCNSLITSGIL # PASA_UPDATE: g4749.t1, single gene model update, valid-1, status:[pasa:asmbl_8201,status:3], valid-1 NODE_562_length_21166_cov_41.4959 . gene 10215 13346 . + . ID=g4749;Name=g4749.t1 NODE_562_length_21166_cov_41.4959 . mRNA 10215 13346 . + . ID=g4749.t1;Parent=g4749;Name=g4749.t1 NODE_562_length_21166_cov_41.4959 . five_prime_UTR 10215 10296 . + . ID=g4749.t1.utr5p1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 10215 10686 . + . ID=g4749.t1.exon1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 10297 10686 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 10861 11205 . + . ID=g4749.t1.exon2;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 10861 11205 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 11405 11749 . + . ID=g4749.t1.exon3;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 11405 11749 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 11928 12266 . + . ID=g4749.t1.exon4;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 11928 12266 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 12576 12923 . + . ID=g4749.t1.exon5;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 12576 12923 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . exon 13063 13346 . + . ID=g4749.t1.exon6;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . CDS 13063 13170 . + 0 ID=cds.g4749.t1;Parent=g4749.t1 NODE_562_length_21166_cov_41.4959 . three_prime_UTR 13171 13346 . + . ID=g4749.t1.utr3p1;Parent=g4749.t1 #PROT g4749.t1 g4749 MVATRAVSAALVASAVLISLALAAHASPSNEQRLTRRDGKQWVVATYGECSAMCNGGIKSPATYECRDATGENVLDSSECELVNKPLENVACNQEKCAWQEVGDPTCTGVCGVGFKIMSFACFSPYNKMAAVDDSLCTGEKPDSVAACDLAACTWSPVSSGECSAPCGGGTQTVAGFECHDANGEVVEAENCVSVTKPDTKTMDCNEDQCLWMPTDDESACMGVCGKGSKTIAFVCTTPYNDTGVALPEELCKDEMPDTTVTCNLDVPCVWSPSAYGACDAPCGGGVQSATEYTCQTPAGEDIDEEYCDVDNQPEEAPTRPCNSEACMYKYGLYGSCSRSCGEGTKKRTATCIEPYGSKKVDDSFCDSLGKPVLSTKCTGTNCGTWSAGDDWSACTLECNGGQQTNKFECRDANKKVLTDSRCLGPKPADLKRNCNTGACAWVVDTSSACSKSCGPGTRTVTYRCNNPNTNAKATSEKSCLTAKPPTTLPCVNNPPCSYAWNVTGYGACSIECNGGTQKPTTFVCVQSTGGVVSSTLCAGKPKPTATKACNTAKCQWIVAKRGVCKVVPGGKKMQTVTYSCNNPNAKKPATKSTLCLSPKPPASVPCKSIIARDSEEAEMSPEA* # ORIGINAL: g4750.t1 original gene structure, not modified by PASA NODE_562_length_21166_cov_41.4959 AUGUSTUS gene 13752 15203 . + . ID=g4750;Name=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS mRNA 13752 15203 . + . ID=g4750.t1;Parent=g4750;Name=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 13752 13845 . + . ID=g4750.t1.exon1;Parent=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 13752 13845 . + 0 ID=cds.g4750.t1;Parent=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 14199 14518 . + . ID=g4750.t1.exon2;Parent=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 14199 14518 . + 2 ID=cds.g4750.t1;Parent=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 15012 15203 . + . ID=g4750.t1.exon3;Parent=g4750.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 15012 15203 . + 0 ID=cds.g4750.t1;Parent=g4750.t1 #PROT g4750.t1 g4750 MVFIRDCARAFGVAGIWLCVVLVLHSISDASANPAPAFGMLVGGQIDLACVTSEPLGLVTPKTTTDRSGPGLTSVPFFRCHAIQELGSSQGTYITCTGKYLAKSIEDTNAILTYEFEGTTVDDKARLVIAITGYSDVSIKLSKEMGNEPGAIEIASWSQRGFTGDGQAYSDTNKDLGHSDHMACRATLRALSSPWEDNVRS* # ORIGINAL: g4747.t1 original gene structure, not modified by PASA NODE_562_length_21166_cov_41.4959 AUGUSTUS gene 2423 3971 . + . ID=g4747;Name=g4747.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS mRNA 2423 3971 . + . ID=g4747.t1;Parent=g4747;Name=g4747.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 2423 2524 . + . ID=g4747.t1.exon1;Parent=g4747.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 2423 2524 . + 0 ID=cds.g4747.t1;Parent=g4747.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 2598 3971 . + . ID=g4747.t1.exon2;Parent=g4747.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 2598 3971 . + 0 ID=cds.g4747.t1;Parent=g4747.t1 #PROT g4747.t1 g4747 MASAVVLYYETQQSHEQCCCGFGSLPTEIVDRHVHRGLFLLRLEHALKYAESPAFRAFIHADIPVAKLCFTLPCLSVGLSDTSPQLAESVVERRKLNLSDSSFSYRSTYGIRDLSIFADIHSLLLQHSHFVTDVSPLSRLNTVALSSCDALVGVSPLRNVPHVVVANCALVVDVSALGSATSLRLYSLPLLDDVSCLGTVKDLSLRLCDGVSTGIAALGRVHKLEISHALWLTDDVLALLGDVHTLSIDCCGNVCDLAPLSRVHTLELVRCNSVFDVSSLNATSLTMEECESLDSLDGLMPCHLTIYECPHLRDYSALNQFPSVKIQYQRVLDLSMVGKIDSLTLNNCTFAQYQDPLTHVINLTIENDFDFESELDDETDGSPDVSPLLADLTLTQSITLENITLVPVDCTHLAHVPKVTLTNCVLRHPGALRFARQLTLFLCELSEDDPLEDHPHASDIMRLTFDVVPTLNVSDCTFMKDVRRMMGAARP* # ORIGINAL: g4748.t1 original gene structure, not modified by PASA NODE_562_length_21166_cov_41.4959 AUGUSTUS gene 4313 8989 . - . ID=g4748;Name=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS mRNA 4313 8989 . - . ID=g4748.t1;Parent=g4748;Name=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 8639 8989 . - . ID=g4748.t1.exon1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 8639 8989 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 8116 8292 . - . ID=g4748.t1.exon2;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 8116 8292 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 7525 7803 . - . ID=g4748.t1.exon3;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 7525 7803 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 7076 7270 . - . ID=g4748.t1.exon4;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 7076 7270 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 6857 6970 . - . ID=g4748.t1.exon5;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 6857 6970 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 6373 6617 . - . ID=g4748.t1.exon6;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 6373 6617 . - 0 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 5872 6012 . - . ID=g4748.t1.exon7;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 5872 6012 . - 1 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 5507 5610 . - . ID=g4748.t1.exon8;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 5507 5610 . - 1 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 5048 5168 . - . ID=g4748.t1.exon9;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 5048 5168 . - 2 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 4796 4905 . - . ID=g4748.t1.exon10;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 4796 4905 . - 1 ID=cds.g4748.t1;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS exon 4313 4383 . - . ID=g4748.t1.exon11;Parent=g4748.t1 NODE_562_length_21166_cov_41.4959 AUGUSTUS CDS 4313 4383 . - 2 ID=cds.g4748.t1;Parent=g4748.t1 #PROT g4748.t1 g4748 MSVSPLVVWLAILAGCGALAVAQRMAPYAPPFDYGVASGDVTDTAASVWTRCSINGSVVSLLIFANHSVSADGNLTLAQRLDNVTASPSMDNTIHARVYNLTAGSNYYYQFRVGTQGSNVGHFRTAPASNSSRPVLLAFSGDSDGFRLPDGTPYYNYFETLGQASLDQPDFFVYLGDTIYGDSEPRQRIAGVQDYTAADYYTSYKQARNYTNLQRLVSTTSVYAQWDDHEVADNFNEHTQNNASEILRIYNGRKAFLSYWPITTAAEPTTSPGAHATIPDDAHRVLREVTFPNNTDSSAFSDCLVEPAYRSFKWGSDVEVFVLDERSCRTIDTLAIQEACKVVAGNSSNTLTGGVLLHPFPLVPESVLDDLFGPLNEILSIASFFTDAFEGVDLDAVRKPIPACAAALKSQNRTYLGRVQKRWLKDSLKNSTAVYKLIANEVPIQHFLFYPYDRWEGYPSEREEILGFIRDQNISNVVFMSTDVHFNVMNSVFADPFANGSDSASLGAPIAHEIVCGPVATLSPVGLVRFYVSETLASATRTLLERYMLDVISTVHAPSCLNIDEYSYTLVSYNNVTKSLVAMVKDGSGQYVTDNRDNNIVCAATLPPLPGAAPLTRGANTATFPQPQQRPLGPE* # PASA_UPDATE: g4751.t1, single gene model update, valid-1, status:[pasa:asmbl_8202,status:12], valid-1 NODE_562_length_21166_cov_41.4959 . gene 16185 20509 . + . ID=g4751;Name=g4751.t1 NODE_562_length_21166_cov_41.4959 . mRNA 16185 20509 . + . ID=g4751.t1;Parent=g4751;Name=g4751.t1 NODE_562_length_21166_cov_41.4959 . five_prime_UTR 16185 16335 . + . ID=g4751.t1.utr5p1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 16185 16438 . + . ID=g4751.t1.exon1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 16336 16438 . + 0 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 16869 17018 . + . ID=g4751.t1.exon2;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 16869 17018 . + 2 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 17220 17871 . + . ID=g4751.t1.exon3;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 17220 17871 . + 2 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 18274 18461 . + . ID=g4751.t1.exon4;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 18274 18461 . + 1 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 18853 18919 . + . ID=g4751.t1.exon5;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 18853 18919 . + 2 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 19104 19245 . + . ID=g4751.t1.exon6;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 19104 19245 . + 1 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 19616 19753 . + . ID=g4751.t1.exon7;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 19616 19753 . + 0 ID=cds.g4751.t1;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . exon 20315 20509 . + . ID=g4751.t1.exon8;Parent=g4751.t1 NODE_562_length_21166_cov_41.4959 . CDS 20315 20509 . + 0 ID=cds.g4751.t1;Parent=g4751.t1 #PROT g4751.t1 g4751 MTAYRKPVPFALWTIRTCLVVVCISRLSECCRMQASSVARPFQKTVLAGSDAGTFDMFSEPLYKGVLKGNLASVLFDSFSADTSTFKVPQLRSDGTLLGSCADDFSLNMIQFAAPSGFPIPYRLSVSVWSPSNLTTAFRAFLVLQQLNTTTPNQRYFAVGCDSPDANYTVRYTNKAAVVNGSLGGLCVPTIADLTALLRGDTAPFRVRAAPVAMVPNRRYQLSVRLDRNEAVMALTFTDSGQTPGTVTRVASLSATLPISLDPMMPDAVPIYSWGVAGGLSKDGNITCLSDLVLTTLGPVDRNIALLTRYYDGEAAYAGFNSTYLENFESANSTAAVNGTANDPHDMQPGGALSDVWVPWAVGDVQFRKFNITSVPLPSVEGCSAVSRGPSTAKFQMGLPSEWRARALFAFGANGTASFGFLLRGYAATDRTSSMLTFYGCLKGSRQGFCRPAIVSSDSRYITRIGTERELSPDVWYRVEIGFVMGCSTAFCDGAEDVPPSVSSDLPSQFVDNIQLNTRVPASSFLSFCPARQVTCTDCGAGLD* # PASA_UPDATE: g4746.t1, single gene model update, valid-1, status:[pasa:asmbl_8200,status:12], valid-1 NODE_562_length_21166_cov_41.4959 . gene 271 1878 . + . ID=g4746;Name=g4746.t1 NODE_562_length_21166_cov_41.4959 . mRNA 271 1878 . + . ID=g4746.t1;Parent=g4746;Name=g4746.t1 NODE_562_length_21166_cov_41.4959 . exon 271 410 . + . ID=g4746.t1.exon1;Parent=g4746.t1 NODE_562_length_21166_cov_41.4959 . CDS 271 410 . + 0 ID=cds.g4746.t1;Parent=g4746.t1;5_prime_partial=true NODE_562_length_21166_cov_41.4959 . exon 658 1080 . + . ID=g4746.t1.exon2;Parent=g4746.t1 NODE_562_length_21166_cov_41.4959 . CDS 658 1045 . + 1 ID=cds.g4746.t1;Parent=g4746.t1 NODE_562_length_21166_cov_41.4959 . exon 1583 1878 . + . ID=g4746.t1.exon3;Parent=g4746.t1 NODE_562_length_21166_cov_41.4959 . three_prime_UTR 1046 1080 . + . ID=g4746.t1.utr3p1;Parent=g4746.t1 NODE_562_length_21166_cov_41.4959 . three_prime_UTR 1583 1878 . + . ID=g4746.t1.utr3p2;Parent=g4746.t1 #PROT g4746.t1 g4746 VVITDYPSGDIVSNIRANVDHNLEAVLAARCAIGGHVWGSPLDDVFALLPADARARDPQEGTESAYGGASYGPFDVVLMADTMWLPSEHAAQMLTVKRALARSGTGYALFADHTCDGGAFAFVDKARDVGLTPTHVTTIKVPGAWGEDASFESGDFRTECKRTVHVYELRHDLSR* # PASA_UPDATE: g5623.t1, single gene model update, valid-1, status:[pasa:asmbl_4369,status:12], valid-1 NODE_2463_length_6180_cov_38.7309 . gene 239 2341 . - . ID=g5623;Name=g5623.t1 NODE_2463_length_6180_cov_38.7309 . mRNA 239 2341 . - . ID=g5623.t1;Parent=g5623;Name=g5623.t1 NODE_2463_length_6180_cov_38.7309 . five_prime_UTR 2018 2341 . - . ID=g5623.t1.utr5p1;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . exon 1011 2341 . - . ID=g5623.t1.exon1;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . CDS 1011 2017 . - 0 ID=cds.g5623.t1;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . exon 485 794 . - . ID=g5623.t1.exon2;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . CDS 485 794 . - 1 ID=cds.g5623.t1;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . exon 239 349 . - . ID=g5623.t1.exon3;Parent=g5623.t1 NODE_2463_length_6180_cov_38.7309 . CDS 239 349 . - 0 ID=cds.g5623.t1;Parent=g5623.t1;3_prime_partial=true #PROT g5623.t1 g5623 MDPIAPPRGTTPPPPYYELYKDAMLSARNAVAADTVSRFTEAHDLYVEAVGALLRDAKVDTDAARSASMRDVAKQYINRAEAIAMAANATRGASTNTANGASNGMHNPASNMGPNNAQRPRAASGPPARDASDNANKSGGKKSTESSDAERRRKSLLDRAEGIYRQGCAEEASGDAPSALEHYKQAASVFLECRKFETEEARRKEIESIVDVVLKKAEKLASAARAVPAVQDREGLSGDVGRGGRSVSPQNARVTSLSVLPGGASVSGNVPGLPRSPRMGAAIGPSGPSTAASSSARLTPAEIEVLRTTSSINARQFVPWLQADVKEKYAYGEPFCDPDGLLKLAPKQEAQFKMWARPSEFCVRTPSMIHSLSAYSIRQTVVSDCSFVASLSICAEYEKKFARRLVTGIIFPQDARGNPVYNPSGKYVVKLNINGVARKVIIDDRLPVDARGRLLCSYSNDGSELWVSLIEKAYLK # ORIGINAL: g5624.t1 original gene structure, not modified by PASA NODE_2463_length_6180_cov_38.7309 AUGUSTUS gene 2881 5295 . - . ID=g5624;Name=g5624.t1 NODE_2463_length_6180_cov_38.7309 AUGUSTUS mRNA 2881 5295 . - . ID=g5624.t1;Parent=g5624;Name=g5624.t1 NODE_2463_length_6180_cov_38.7309 AUGUSTUS exon 2881 5295 . - . ID=g5624.t1.exon1;Parent=g5624.t1 NODE_2463_length_6180_cov_38.7309 AUGUSTUS CDS 2881 5295 . - 0 ID=cds.g5624.t1;Parent=g5624.t1 #PROT g5624.t1 g5624 MARPRCPAIGGCQPTTIAESLYAHLSGEQGLKTRWDRWFIHQGTRVQSFLVYDEDVPSIMHNESLATNPKNTLNNHLHRTLRFKKAGDCAAEPRFTEWYDPRGDFVAPGMPPTPQEIATRCFIASSLAAPKAIPAPLTSEDVKMLRDGGKSRSQSERRPSARLSMEATSKMRSCSLNAPFEGSPFSTDVRSELVAMKTEAGEVRRSLSKEALQDRQMPSPDGADSNGCASPQRQSRSSSARGPSTTTARRRSTVQLKRSMSQPVPEPTRVIAVAAAAAAAAGGNQVGGGRVETTTQSEDPFSSDVEPRAHSYEDSSSGPLLEMLDMDGPFDRMDEQYGGGGAMPEHKCDAPLHQSGRQADYERTGGYRHHFEGEYVRAHHSAGHFGMERQLHAPHPGEFASPPVEVPGTPYYQAMQDAFAHPSLDHGTHVWNDPYPPTAFESELAPMSVNYLEDGGQGTGYQLYMSAEMAELEHGVVEKLHVRGDELHVHNRDAQFGFARSYLSDGRMSPSPTPSAGTDPDALESGARSTVTSLWREIEQMVAAKRARDSVRSRRSNSCHDNATDNNRDSDHTRDVNPFDDDASMCGAADAATTTATRSLEDAGGRVTGNGDRGYSTLTWMVAEALAKEHGYRGHGAGAGVLSGDSTDSSPPRNGKSHRRPSSKITRTRSLSSVNIMPYPLSSSPDRAVSTGRRRVGSLRGSRESGQQVGIRGSAGLAGGSGGSLVSSSYGTTPSVGFGAYGLQHELGVSMMKEKEAAIVRLFPLVSQWLAHTDFEGLRLSGDDAVARAVDDLCHHASVFLGAD* # PASA_UPDATE: g5678.t1, single gene model update, valid-1, status:[pasa:asmbl_4049,status:12], valid-1 NODE_2328_length_6715_cov_42.0426 . gene 5723 6485 . - . ID=g5678;Name=g5678.t1 NODE_2328_length_6715_cov_42.0426 . mRNA 5723 6485 . - . ID=g5678.t1;Parent=g5678;Name=g5678.t1 NODE_2328_length_6715_cov_42.0426 . five_prime_UTR 6485 6485 . - . ID=g5678.t1.utr5p1;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . exon 6366 6485 . - . ID=g5678.t1.exon1;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . CDS 6366 6484 . - 0 ID=cds.g5678.t1;Parent=g5678.t1;5_prime_partial=true NODE_2328_length_6715_cov_42.0426 . exon 6128 6227 . - . ID=g5678.t1.exon2;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . CDS 6128 6227 . - 1 ID=cds.g5678.t1;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . exon 5723 5949 . - . ID=g5678.t1.exon3;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . CDS 5788 5949 . - 0 ID=cds.g5678.t1;Parent=g5678.t1 NODE_2328_length_6715_cov_42.0426 . three_prime_UTR 5723 5787 . - . ID=g5678.t1.utr3p1;Parent=g5678.t1 #PROT g5678.t1 g5678 VTPDFTVRPEATAASQRQGLSRFPENPESNWGPKARAKKRVAEPLEEEGEPVKKKQRKALQQHPEIPCNKFRKEGSCPFGDSCRYSHDPEMPIPSAKNPVLKYSNNRANTRSRAGGDASASTKSPQ* # ORIGINAL: g5677.t1 original gene structure, not modified by PASA NODE_2328_length_6715_cov_42.0426 AUGUSTUS gene 3420 4637 . - . ID=g5677;Name=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS mRNA 3420 4637 . - . ID=g5677.t1;Parent=g5677;Name=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS exon 4603 4637 . - . ID=g5677.t1.exon1;Parent=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS CDS 4603 4637 . - 0 ID=cds.g5677.t1;Parent=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS exon 3988 4240 . - . ID=g5677.t1.exon2;Parent=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS CDS 3988 4240 . - 1 ID=cds.g5677.t1;Parent=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS exon 3420 3710 . - . ID=g5677.t1.exon3;Parent=g5677.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS CDS 3420 3710 . - 0 ID=cds.g5677.t1;Parent=g5677.t1 #PROT g5677.t1 g5677 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLISPASFENVRAKWYPEVSHHCPNTPIILVGTKLDLREDKEAIEKLREKKLAPITYPQGLQMAKEVNAVKYLECSALTQKGLKTVFDEAIRAVLCPQKPQGKKKGCLIL* # PASA_UPDATE: g5676.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4050,status:12], valid-1 # PASA_UPDATE: g5676.t1, single gene model update, valid-1, status:[pasa:asmbl_4051,status:12], valid-1 NODE_2328_length_6715_cov_42.0426 . gene 978 2233 . + . ID=g5676;Name=g5676.t1 NODE_2328_length_6715_cov_42.0426 . mRNA 978 2233 . + . ID=g5676.t1.1.5b6be70b;Parent=g5676;Name=g5676.t1 NODE_2328_length_6715_cov_42.0426 . five_prime_UTR 978 1013 . + . ID=g5676.t1.1.5b6be70b.utr5p1;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . exon 978 1016 . + . ID=g5676.t1.1.5b6be70b.exon1;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . CDS 1014 1016 . + 0 ID=cds.g5676.t1.1.5b6be70b;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . exon 1192 1228 . + . ID=g5676.t1.1.5b6be70b.exon2;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . CDS 1192 1228 . + 0 ID=cds.g5676.t1.1.5b6be70b;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . exon 1381 1426 . + . ID=g5676.t1.1.5b6be70b.exon3;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . CDS 1381 1426 . + 2 ID=cds.g5676.t1.1.5b6be70b;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . exon 1630 1753 . + . ID=g5676.t1.1.5b6be70b.exon4;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . CDS 1630 1753 . + 1 ID=cds.g5676.t1.1.5b6be70b;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . exon 2068 2233 . + . ID=g5676.t1.1.5b6be70b.exon5;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . CDS 2068 2115 . + 0 ID=cds.g5676.t1.1.5b6be70b;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . three_prime_UTR 2116 2233 . + . ID=g5676.t1.1.5b6be70b.utr3p1;Parent=g5676.t1.1.5b6be70b NODE_2328_length_6715_cov_42.0426 . mRNA 1137 2233 . + . ID=g5676.t1;Parent=g5676;Name=g5676.t1 NODE_2328_length_6715_cov_42.0426 . five_prime_UTR 1137 1274 . + . ID=g5676.t1.utr5p1;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . exon 1137 1426 . + . ID=g5676.t1.exon1;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . CDS 1275 1426 . + 0 ID=cds.g5676.t1;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . exon 1630 1753 . + . ID=g5676.t1.exon2;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . CDS 1630 1753 . + 1 ID=cds.g5676.t1;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . exon 2068 2233 . + . ID=g5676.t1.exon3;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . CDS 2068 2115 . + 0 ID=cds.g5676.t1;Parent=g5676.t1 NODE_2328_length_6715_cov_42.0426 . three_prime_UTR 2116 2233 . + . ID=g5676.t1.utr3p1;Parent=g5676.t1 #PROT g5676.t1.1.5b6be70b g5676 MADRYNMHSQLEHLQSKYVGTGHSDTNKYEWLANQHRDSSASFMGHPNLLAYFAIAENDSVARVRFNLLKKMLQPCGPPPEKGED* #PROT g5676.t1 g5676 MLCASLMSETTIFLPEHQPIALYIVNVCPLFLYFAVQSKYVGTGHSDTNKYEWLANQHRDSSASFMGHPNLLAYFAIAENDSVARVRFNLLKKMLQPCGPPPEKGED* # ORIGINAL: g5675.t1 original gene structure, not modified by PASA NODE_2328_length_6715_cov_42.0426 AUGUSTUS gene 163 556 . - . ID=g5675;Name=g5675.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS mRNA 163 556 . - . ID=g5675.t1;Parent=g5675;Name=g5675.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS exon 163 556 . - . ID=g5675.t1.exon1;Parent=g5675.t1 NODE_2328_length_6715_cov_42.0426 AUGUSTUS CDS 163 556 . - 0 ID=cds.g5675.t1;Parent=g5675.t1 #PROT g5675.t1 g5675 MSGVGVSGSQVFQPFRALGHVANHVPFALQTKGTEHFVTTCIGRSFHTYNCGRLNLLFVGRETDRSIRAMVAHDDLIIVAVGARIVLFKRGKPVGVLGEHDADVNLLMCFGAHLISVDESNSLKIWDIGNR # PASA_UPDATE: g13658.t1, single gene model update, valid-1, status:[pasa:asmbl_451,status:3], valid-1 NODE_1118_length_13815_cov_33.6031 . gene 5772 7798 . - . ID=g13658;Name=g13658.t1 NODE_1118_length_13815_cov_33.6031 . mRNA 5772 7798 . - . ID=g13658.t1;Parent=g13658;Name=g13658.t1 NODE_1118_length_13815_cov_33.6031 . five_prime_UTR 7681 7798 . - . ID=g13658.t1.utr5p1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . exon 7572 7798 . - . ID=g13658.t1.exon1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . CDS 7572 7680 . - 0 ID=cds.g13658.t1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . exon 6609 6670 . - . ID=g13658.t1.exon2;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . CDS 6609 6670 . - 2 ID=cds.g13658.t1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . exon 6155 6254 . - . ID=g13658.t1.exon3;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . CDS 6155 6254 . - 0 ID=cds.g13658.t1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . exon 5772 5966 . - . ID=g13658.t1.exon4;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . CDS 5914 5966 . - 2 ID=cds.g13658.t1;Parent=g13658.t1 NODE_1118_length_13815_cov_33.6031 . three_prime_UTR 5772 5913 . - . ID=g13658.t1.utr3p1;Parent=g13658.t1 #PROT g13658.t1 g13658 MNVGKCRNCQKTVYQLEAVTVGPPKKVEVFHKSCFKCDQPGCSWPINVSNYKYMNDKVWCQAHCPMSGASYGGHTGNSQDIHSQTIQAAVNSPKQSLVNKEVRQPPK* # PASA_UPDATE: g13659.t1, single gene model update, valid-1, status:[pasa:asmbl_450,status:12], valid-1 NODE_1118_length_13815_cov_33.6031 . gene 7990 13576 . + . ID=g13659;Name=g13659.t1 NODE_1118_length_13815_cov_33.6031 . mRNA 7990 13576 . + . ID=g13659.t1;Parent=g13659;Name=g13659.t1 NODE_1118_length_13815_cov_33.6031 . five_prime_UTR 7990 8050 . + . ID=g13659.t1.utr5p1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 7990 8137 . + . ID=g13659.t1.exon1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 8051 8137 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 8410 8445 . + . ID=g13659.t1.exon2;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 8410 8445 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 8813 9153 . + . ID=g13659.t1.exon3;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 8813 9153 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 9557 9674 . + . ID=g13659.t1.exon4;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 9557 9674 . + 1 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 9946 10037 . + . ID=g13659.t1.exon5;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 9946 10037 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 10331 10484 . + . ID=g13659.t1.exon6;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 10331 10484 . + 1 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 10814 10877 . + . ID=g13659.t1.exon7;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 10814 10877 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 11109 11181 . + . ID=g13659.t1.exon8;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 11109 11181 . + 2 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 11331 11493 . + . ID=g13659.t1.exon9;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 11331 11493 . + 1 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 12246 12380 . + . ID=g13659.t1.exon10;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 12246 12380 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 12572 12737 . + . ID=g13659.t1.exon11;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 12572 12737 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 13061 13119 . + . ID=g13659.t1.exon12;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 13061 13119 . + 2 ID=cds.g13659.t1;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . exon 13463 13576 . + . ID=g13659.t1.exon13;Parent=g13659.t1 NODE_1118_length_13815_cov_33.6031 . CDS 13463 13576 . + 0 ID=cds.g13659.t1;Parent=g13659.t1 #PROT g13659.t1 g13659 MASTGTDAKRTADDRDASDGRDAADYRAKRARFLEEEKSKDNLDLDDDTYVPYVPVRERRKHLLERTEAMRKRPDEKVEQEEEVVVFDVGPLAKVSLLDKHSEMKKIAEERNETVVEKQLKEEEEILRAMSEKKALMSVTELAKGISYTEPIKTSWKPTRHYLNMPPSKHDKLRDDWHILVDGDDIPPPIVEFPEMKLPKPVLKVLKDRGIKTPTPIQVQGLPVLLSGRDMIGIAFTGSGKTLVFTLPILMFALEQEVKMPFVAGEGPYGLIMVPSRELASQIHEILTQYATALEEAGYPKIRVVLCMGGSSIKDQAEAFKHGVHIVVATPGRLIDMLTKKKFTLDVCRYLALDEADRMIDMGFEEDMRTVFSFFKGQRQTALFSATMPQKIQDFARSALVKPIVVNVGRAGAANLDVIQEVEFVKSEAKIVYLLECLQKTSPPVLIFAEKKGDVDSIHEYLLLKGVEAVAIHGGKDQEEREWAIKSFRAGKKDVLVATDIASKGLDFPDIQHVINFDMPDDIENYGECLFLV* # ORIGINAL: g13657.t1 original gene structure, not modified by PASA NODE_1118_length_13815_cov_33.6031 AUGUSTUS gene 4829 5275 . - . ID=g13657;Name=g13657.t1 NODE_1118_length_13815_cov_33.6031 AUGUSTUS mRNA 4829 5275 . - . ID=g13657.t1;Parent=g13657;Name=g13657.t1 NODE_1118_length_13815_cov_33.6031 AUGUSTUS exon 4829 5275 . - . ID=g13657.t1.exon1;Parent=g13657.t1 NODE_1118_length_13815_cov_33.6031 AUGUSTUS CDS 4829 5275 . - 0 ID=cds.g13657.t1;Parent=g13657.t1 #PROT g13657.t1 g13657 MVSSPDLRETGAVSTTSLLGTVTLFYIVLHAVAIWNTLAWTANAMPLASSGRSRMFSVLNNAVEVLVLVLGFAFIALVKGGSGSATPGRAWVTWQLVSPLWVLGQCGYAIHQRRRKRRGASDSVNGDRDARDPQAENRALLDLEMMEL* # PASA_UPDATE: g7770.t1, single gene model update, valid-1, status:[pasa:asmbl_8177,status:12], valid-1 NODE_559_length_21198_cov_41.4364 . gene 84 935 . + . ID=g7770;Name=g7770.t1 NODE_559_length_21198_cov_41.4364 . mRNA 84 935 . + . ID=g7770.t1;Parent=g7770;Name=g7770.t1 NODE_559_length_21198_cov_41.4364 . five_prime_UTR 84 85 . + . ID=g7770.t1.utr5p1;Parent=g7770.t1 NODE_559_length_21198_cov_41.4364 . exon 84 413 . + . ID=g7770.t1.exon1;Parent=g7770.t1 NODE_559_length_21198_cov_41.4364 . CDS 86 413 . + 0 ID=cds.g7770.t1;Parent=g7770.t1;5_prime_partial=true NODE_559_length_21198_cov_41.4364 . exon 538 638 . + . ID=g7770.t1.exon2;Parent=g7770.t1 NODE_559_length_21198_cov_41.4364 . CDS 538 638 . + 2 ID=cds.g7770.t1;Parent=g7770.t1 NODE_559_length_21198_cov_41.4364 . exon 723 935 . + . ID=g7770.t1.exon3;Parent=g7770.t1 NODE_559_length_21198_cov_41.4364 . CDS 723 935 . + 0 ID=cds.g7770.t1;Parent=g7770.t1 #PROT g7770.t1 g7770 IMATKAARTNLYILRTCVRVGQGTFLPHIHSIGFKASLHGRPPCRLLPVQALVVCNTAQRALFYGSEAHSGPAVEGLAAEIEPKGSGRAPPVTVVRKTVTCRDMRLDVVGSECLKQSRNAFQLSLLAGEVGINGNPVVKKSLRVKQGDTVTLTQPTRVFKARILQVTSSTSAKAQTVHSVVFERTHTPVRSQPAGQVPQSACRAGPVQPAAVD* # ORIGINAL: g7773.t1 original gene structure, not modified by PASA NODE_559_length_21198_cov_41.4364 AUGUSTUS gene 6806 9622 . + . ID=g7773;Name=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS mRNA 6806 9622 . + . ID=g7773.t1;Parent=g7773;Name=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 6806 6861 . + . ID=g7773.t1.exon1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 6806 6861 . + 0 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 7011 7111 . + . ID=g7773.t1.exon2;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 7011 7111 . + 1 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 7211 7309 . + . ID=g7773.t1.exon3;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 7211 7309 . + 2 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 7397 7562 . + . ID=g7773.t1.exon4;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 7397 7562 . + 2 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 7690 7783 . + . ID=g7773.t1.exon5;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 7690 7783 . + 1 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 7899 8013 . + . ID=g7773.t1.exon6;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 7899 8013 . + 0 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 8204 8343 . + . ID=g7773.t1.exon7;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 8204 8343 . + 2 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 8431 8727 . + . ID=g7773.t1.exon8;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 8431 8727 . + 0 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 8811 8877 . + . ID=g7773.t1.exon9;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 8811 8877 . + 0 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 9019 9130 . + . ID=g7773.t1.exon10;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 9019 9130 . + 2 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 9231 9333 . + . ID=g7773.t1.exon11;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 9231 9333 . + 1 ID=cds.g7773.t1;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 9482 9622 . + . ID=g7773.t1.exon12;Parent=g7773.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 9482 9622 . + 0 ID=cds.g7773.t1;Parent=g7773.t1 #PROT g7773.t1 g7773 MDDSGGELLDLAGVEPGSSYTEPPLFNRKLDSPAANVDIPGDTVPEEKEDLQDVEEAQSDGDVSLGEGDVTVEVVSRPRRKYADEDMQDPNWSRHEKHFFVLSNAGKPIYARYGNEDKLATIMGVMQALISFVQDESDVLRSITAGNHKFVFVCKGPIILVAVTSTFESEAQLAVQLGYIHSQILSVLTGTQLTRIFEQRRNYDLRRLLAGTDRFIDSLIHLMDYDPSFLLGAVRCLPLLSSVRDKIGAVLQAARPKDLLFAVMVARDQLITLLRPKQHSLHPADLHLVFNLVHASSSFTAGESWTPLCLPRFNSKGFLHAHVSYLDNDNIVCLLLICTNKDAFFEMSTARGEIAANLEACGALATIKESLARENYRIAHVDIPDLRHFIYKSKTTAQYTSPTLEAPYSDRAEQKRLFRQYQFLHNRVHSEARPLKLYYLVGSKEIMLAWITTGFELYSAFSPLTTKPASINAINRLLRWIKREEDKLFILNSQLF* # PASA_UPDATE: g7771.t1, single gene model update, valid-1, status:[pasa:asmbl_8179,status:12], valid-1 NODE_559_length_21198_cov_41.4364 . gene 952 3366 . - . ID=g7771;Name=g7771.t1 NODE_559_length_21198_cov_41.4364 . mRNA 952 3366 . - . ID=g7771.t1;Parent=g7771;Name=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 3240 3366 . - . ID=g7771.t1.exon1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 3240 3366 . - 0 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 2853 3140 . - . ID=g7771.t1.exon2;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 2853 3140 . - 2 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 2701 2743 . - . ID=g7771.t1.exon3;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 2701 2743 . - 2 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 2304 2538 . - . ID=g7771.t1.exon4;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 2304 2538 . - 1 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 2005 2163 . - . ID=g7771.t1.exon5;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 2005 2163 . - 0 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 1747 1878 . - . ID=g7771.t1.exon6;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 1747 1878 . - 0 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 1424 1576 . - . ID=g7771.t1.exon7;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 1424 1576 . - 0 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . exon 952 1301 . - . ID=g7771.t1.exon8;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . CDS 1197 1301 . - 0 ID=cds.g7771.t1;Parent=g7771.t1 NODE_559_length_21198_cov_41.4364 . three_prime_UTR 952 1196 . - . ID=g7771.t1.utr3p1;Parent=g7771.t1 #PROT g7771.t1 g7771 MTSASSDGVWTKDIEEAFEEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKMRTGKHRSRKQVSSHIQVLSRKRAREAAGIFDESESGMGLVDDATARAVEGLAGLSALASPADSDESSPSPHPQSPVSPAGGVQKRAKKAVPNLIARTNDHAKAMTSGAYALIGLAHSPSASPRPTAPNPVVAAAAAAAAAAASGNGPKIIANPFAPPKMSLVDMVGFLEYKSAANGAAKRHSFVHLIGPAPFHDPHLETVDIKQIYDKFPGLKELYTVGPKSAFFLIKFWADLSVEQMDGFYGITSRYISDEDPVIKCSTKVCSFGKQVVEKIQIEFPAFDAGRAVYSFGRSQMCDYMVEFVKKLRSLPNKETMDTVLENFSVLQVVCNRDTNEILLCTAYVFEISSGPTQHHIYRLIE* # PASA_UPDATE: g7775.t1, single gene model update, valid-1, status:[pasa:asmbl_8181,status:3], valid-1 NODE_559_length_21198_cov_41.4364 . gene 13121 14442 . - . ID=g7775;Name=g7775.t1 NODE_559_length_21198_cov_41.4364 . mRNA 13121 14442 . - . ID=g7775.t1;Parent=g7775;Name=g7775.t1 NODE_559_length_21198_cov_41.4364 . five_prime_UTR 14356 14442 . - . ID=g7775.t1.utr5p1;Parent=g7775.t1 NODE_559_length_21198_cov_41.4364 . exon 14287 14442 . - . ID=g7775.t1.exon1;Parent=g7775.t1 NODE_559_length_21198_cov_41.4364 . CDS 14287 14355 . - 0 ID=cds.g7775.t1;Parent=g7775.t1 NODE_559_length_21198_cov_41.4364 . exon 13121 14192 . - . ID=g7775.t1.exon2;Parent=g7775.t1 NODE_559_length_21198_cov_41.4364 . CDS 13452 14192 . - 0 ID=cds.g7775.t1;Parent=g7775.t1 NODE_559_length_21198_cov_41.4364 . three_prime_UTR 13121 13451 . - . ID=g7775.t1.utr3p1;Parent=g7775.t1 #PROT g7775.t1 g7775 MGCDGGTIPTRGEVVKQKKKPETIDKDILMYAKWLYCALSTEELSTPIVACELGKLYNKEAVITFLLDRSKFAEHGLVAAGHIRSLRDIVTLNLTTNESAAGSQVESADKYMDRQASKYVCPISGLEMNGRYKFCFLRSCGCVLSEKALREIPSTTCHKCGKAYVEQDVVVINGNEESVERNRANMEARRALAKESKKDKGITRKSANAADTASVLAVGLSGKQLVQLETVILLAGADVLPPLCLPLQRSERQLSLSKGMLFNRRKSLQ* # PASA_UPDATE: g7772.t1, single gene model update, valid-1, status:[pasa:asmbl_8180,status:3], valid-1 NODE_559_length_21198_cov_41.4364 . gene 4105 6550 . - . ID=g7772;Name=g7772.t1 NODE_559_length_21198_cov_41.4364 . mRNA 4105 6550 . - . ID=g7772.t1;Parent=g7772;Name=g7772.t1 NODE_559_length_21198_cov_41.4364 . five_prime_UTR 6275 6550 . - . ID=g7772.t1.utr5p1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 6184 6550 . - . ID=g7772.t1.exon1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 6184 6274 . - 0 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 5846 6059 . - . ID=g7772.t1.exon2;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 5846 6059 . - 2 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 5584 5716 . - . ID=g7772.t1.exon3;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 5584 5716 . - 1 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 5379 5486 . - . ID=g7772.t1.exon4;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 5379 5486 . - 0 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 5143 5252 . - . ID=g7772.t1.exon5;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 5143 5252 . - 0 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 4919 5033 . - . ID=g7772.t1.exon6;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 4919 5033 . - 1 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 4676 4825 . - . ID=g7772.t1.exon7;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 4676 4825 . - 0 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . exon 4105 4514 . - . ID=g7772.t1.exon8;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . CDS 4176 4514 . - 0 ID=cds.g7772.t1;Parent=g7772.t1 NODE_559_length_21198_cov_41.4364 . three_prime_UTR 4105 4175 . - . ID=g7772.t1.utr3p1;Parent=g7772.t1 #PROT g7772.t1 g7772 MICCSRMTNVVEPGLGTEPREQQLHVANGNGTVNGAGDASPTPARETEAEKEARLAALEVQERLEIVHRYGKGPERHLDEIDESQQPQYSIYARIDRYGFIHDKELPDGQKSKKEEKEVIKERERALKWTKMLANWDSFRGARSKKLRSRVYKGIPDSLRGQAWSRILGIKAEKAANADVYQQWRERSQKESTYLRQIDLDINRTFRNHIMFKDRYSIKQIELYFVLSAYSVMNPEIGYCQGMSGIVALLLMYMDEEDAFWGLVILFRDSAHGMNGLFLPGFPKLMENFELHQKLTEAHLPDVHRHFSQENVMISAYASKWFLQCFLDRVPFELNLRIWDIFILDGYRVVVSMSLGFLRLHRKRLLEMNFEESLTFLQNLQNHDHDVELAIKTLKLYVNEFTESVLRELKEESVDVQRP* # ORIGINAL: g7777.t1 original gene structure, not modified by PASA NODE_559_length_21198_cov_41.4364 AUGUSTUS gene 17309 19229 . - . ID=g7777;Name=g7777.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS mRNA 17309 19229 . - . ID=g7777.t1;Parent=g7777;Name=g7777.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 18660 19229 . - . ID=g7777.t1.exon1;Parent=g7777.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 18660 19229 . - 0 ID=cds.g7777.t1;Parent=g7777.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 17309 18523 . - . ID=g7777.t1.exon2;Parent=g7777.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 17309 18523 . - 0 ID=cds.g7777.t1;Parent=g7777.t1 #PROT g7777.t1 g7777 MSDEDAAYATLLRREMQFASSACPAKSLDPACMRPAVAHLATSGACAKCILRFIGCTTPSAYVPQSNSVGSALASLFGLGEGEGASPLSPLLVGDAASIARRGDSACRICLGTLQTASDLLVVADIASRVRTLDYDCGSINVIAELPGCTTVRNLCAVVSLNAACPSLCMKDPRKTAADLQDITRGVLMRALSASLGKEGSAHSALTVTVSYSYAEDASECAPFLHARKHAGQHDGRARQGSGGGISDGAVPKVQVTRAFESMAAADVAGALARGARCPPGPPSCPVCTAPPSLRTEHAPAFIAGRYIKRCRGLSQSPWIIAGRRLAASSVEEAVVGPLRELLHASDARFVCAGREDADVRMLGEGRPFFVECIDPRRPSPSPEQLAIAASEISRRSDGAVVVDHFRLLPRAVAAGKMREGESEKRKSYSCVVWLEHAVASRAADILSSLGPMDVSQRTPIRVLQRRANADRTRTVEVVSAIALSPHFIALNLVTQAGTYVKEFVHGDRGRTVPSVGSLVGCDADIVQLDVIAIDMTWPPTDDQADSSCEHQMDATNRGGGRGSRSGRGGRGGSGWRGGRGGHSQAQGAAAPKA* # PASA_UPDATE: g7776.t1, single gene model update, valid-1, status:[pasa:asmbl_8178,status:12], valid-1 NODE_559_length_21198_cov_41.4364 . gene 14762 17173 . + . ID=g7776;Name=g7776.t1 NODE_559_length_21198_cov_41.4364 . mRNA 14762 17173 . + . ID=g7776.t1;Parent=g7776;Name=g7776.t1 NODE_559_length_21198_cov_41.4364 . five_prime_UTR 14762 14902 . + . ID=g7776.t1.utr5p1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 14762 15051 . + . ID=g7776.t1.exon1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 14903 15051 . + 0 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 15167 15260 . + . ID=g7776.t1.exon2;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 15167 15260 . + 1 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 15340 15455 . + . ID=g7776.t1.exon3;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 15340 15455 . + 0 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 15606 15715 . + . ID=g7776.t1.exon4;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 15606 15715 . + 1 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 15851 16051 . + . ID=g7776.t1.exon5;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 15851 16051 . + 2 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 16448 16617 . + . ID=g7776.t1.exon6;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 16448 16617 . + 2 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . exon 16914 17173 . + . ID=g7776.t1.exon7;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . CDS 16914 17153 . + 0 ID=cds.g7776.t1;Parent=g7776.t1 NODE_559_length_21198_cov_41.4364 . three_prime_UTR 17154 17173 . + . ID=g7776.t1.utr3p1;Parent=g7776.t1 #PROT g7776.t1 g7776 MDFSPGPLRLEHGGGIYEVPTDDCDAGKRCGWAAATHFASHQQRTTVQHWQLRHLMAAEGETKVLAVFKNKLMSYDTEAREGRVVLELSYAPTSLDVGCGYAATCGQEGQLSLFDLESGRLAVDTVISRTVNNGLHIAEAGGIVRLIVANNDNEVKVYHVTRSQTPGLVALVEVAIVKLPVAANYAAVSPCGRRMVVAGDSPDVFLYAVGSSQDAYRRIGTMRESRDNGFSCAWHPNSNVFAVASQDGLVVVWDVRGKGPLARLCAVQASRARGACRSVKFAHRSGIDLLAFAEHVTYAHIVDARTFDNHQWVPAGVGNIAGLAFSESCSRFYVALEGNLGEFHIDSASRRAFADGTLI* # ORIGINAL: g7774.t1 original gene structure, not modified by PASA NODE_559_length_21198_cov_41.4364 AUGUSTUS gene 9689 11903 . - . ID=g7774;Name=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS mRNA 9689 11903 . - . ID=g7774.t1;Parent=g7774;Name=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 10540 11903 . - . ID=g7774.t1.exon1;Parent=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 10540 11903 . - 0 ID=cds.g7774.t1;Parent=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 10186 10380 . - . ID=g7774.t1.exon2;Parent=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 10186 10380 . - 1 ID=cds.g7774.t1;Parent=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS exon 9689 10052 . - . ID=g7774.t1.exon3;Parent=g7774.t1 NODE_559_length_21198_cov_41.4364 AUGUSTUS CDS 9689 10052 . - 1 ID=cds.g7774.t1;Parent=g7774.t1 #PROT g7774.t1 g7774 MLSLLVATQVTAERKWKLVVAHFNFPASCTSASFILRQNYERFLLDYEKLTYGSAHKYAPGGSHSAVAAAMVTAPAPSKPYHAYAPPIGSSTTSHAQLHSQAAGDRASLAPHTTSVALPATALDYSGLHRLGRGGCVQHLPYALQCGLPNEADWAVNALLMLSADEHGDKGPRLLRDSPLLLDIVVPMVVRWLRGACGYEMEGGDGGLFGGRGEDVAVARVERGLAVMVALRNLTMWEDSAAVMARSKAFLSLLARLLDSSEKESEGGAHLNTAEGRAAGAHQLAVDCAVNVARFVSLGDKSHAVSSFAKSLLSFVSAGLASADRSQFIAAVSGIAALCEGDEGGNAERLEKVLGDADVTCITRALLVPDARIVIPSLEALYRCTFLSPTMARRMCGDPRVVADLVRLALFDQGSFDCDAAIAPAGNAFGDEGNDECAWESGASSSDALRAMIHWIHANFEQDATGASSRVDRVDMYRRYVASCAAAGVPHQNASAFAAAAHSLFPSLASSSSDTADGWTHTYRGIRDRHGGDAEWHAAWSEAAGDSTTAQWDVAHTSSSSWTVGVRWGSVDELMAAYAAANVGVVSASVRFTASLVLRNIAREPLCQRHLGEHATILAVFACTQHSGASALADCVGELM* # PASA_UPDATE: g14323.t1, single gene model update, valid-1, status:[pasa:asmbl_3661,status:12], valid-1 NODE_2164_length_7452_cov_42.9543 . gene 4633 7397 . - . ID=g14323;Name=g14323.t1 NODE_2164_length_7452_cov_42.9543 . mRNA 4633 7397 . - . ID=g14323.t1;Parent=g14323;Name=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 7371 7397 . - . ID=g14323.t1.exon1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 7371 7397 . - 0 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 7039 7198 . - . ID=g14323.t1.exon2;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 7039 7198 . - 0 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 6616 6762 . - . ID=g14323.t1.exon3;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 6616 6762 . - 2 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 5849 6227 . - . ID=g14323.t1.exon4;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 5849 6227 . - 2 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 5319 5424 . - . ID=g14323.t1.exon5;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 5319 5424 . - 1 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . exon 4633 5083 . - . ID=g14323.t1.exon6;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . CDS 4877 5083 . - 0 ID=cds.g14323.t1;Parent=g14323.t1 NODE_2164_length_7452_cov_42.9543 . three_prime_UTR 4633 4876 . - . ID=g14323.t1.utr3p1;Parent=g14323.t1 #PROT g14323.t1 g14323 MYAAVAGCTKLLRGKDSWSLSELVQAIVLLVQFHALSGIAFGCGLTPELDMEGGYALGDDSREQLHDVCDNISEAGDQWTAEIAAKLQNDKENDDVTEEENRRNFESSETEPSLPTGLTGSSSCAEFFRFNSIGSGSSTTTPAAYLSPASGLTPSGSGYNTPTHQQQQGAVSLSLQSTSIDVGTMAHADINVSKDPILRDQDYSWADHGFSLINRFYPDVGQMLDTEFRAALDLTYHSIGDVKDVDTSKYRQAVWYYILRIKGIQHDDYNYKLVNDFLARPLKRFIKMATCYPEMITATDYATFAKGLKHSERVHVILLCIEARKQAELAWALKAIMDYMT* # ORIGINAL: g14321.t1 original gene structure, not modified by PASA NODE_2164_length_7452_cov_42.9543 AUGUSTUS gene 1698 2162 . - . ID=g14321;Name=g14321.t1 NODE_2164_length_7452_cov_42.9543 AUGUSTUS mRNA 1698 2162 . - . ID=g14321.t1;Parent=g14321;Name=g14321.t1 NODE_2164_length_7452_cov_42.9543 AUGUSTUS exon 1971 2162 . - . ID=g14321.t1.exon1;Parent=g14321.t1 NODE_2164_length_7452_cov_42.9543 AUGUSTUS CDS 1971 2162 . - 0 ID=cds.g14321.t1;Parent=g14321.t1 NODE_2164_length_7452_cov_42.9543 AUGUSTUS exon 1698 1826 . - . ID=g14321.t1.exon2;Parent=g14321.t1 NODE_2164_length_7452_cov_42.9543 AUGUSTUS CDS 1698 1826 . - 0 ID=cds.g14321.t1;Parent=g14321.t1 #PROT g14321.t1 g14321 MGCGPSKSDGTVADKPSPQKGAETATTDKSHEKHSRSPATIRAAAEENDKFENTDLPARAKSPKDEMVWSARRGSLIPKSVDDADVIFTKQVADVLEGTKDTFNIQ* # PASA_UPDATE: g14322.t1, single gene model update, valid-1, status:[pasa:asmbl_3662,status:3], valid-1 NODE_2164_length_7452_cov_42.9543 . gene 2987 4653 . + . ID=g14322;Name=g14322.t1 NODE_2164_length_7452_cov_42.9543 . mRNA 2987 4653 . + . ID=g14322.t1;Parent=g14322;Name=g14322.t1 NODE_2164_length_7452_cov_42.9543 . five_prime_UTR 2987 3057 . + . ID=g14322.t1.utr5p1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . exon 2987 3147 . + . ID=g14322.t1.exon1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . CDS 3058 3147 . + 0 ID=cds.g14322.t1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . exon 3280 3397 . + . ID=g14322.t1.exon2;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . CDS 3280 3397 . + 0 ID=cds.g14322.t1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . exon 3700 3848 . + . ID=g14322.t1.exon3;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . CDS 3700 3848 . + 2 ID=cds.g14322.t1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . exon 4158 4653 . + . ID=g14322.t1.exon4;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . CDS 4158 4274 . + 0 ID=cds.g14322.t1;Parent=g14322.t1 NODE_2164_length_7452_cov_42.9543 . three_prime_UTR 4275 4653 . + . ID=g14322.t1.utr3p1;Parent=g14322.t1 #PROT g14322.t1 g14322 MVEHTLGNIPIRIKRHDVNYDQLTNELLYGTDWTEPWLASLIAFHVLTFIAIIATRRSWRLQTFLLISLGGLVLAAQRINELAASTWQSFSLENHFDEHGFFISMVFSLPTLLNLCIVAVFALRDAGSLMVKAKRLQLREQIAKRGNAASAETRKDK* # PASA_UPDATE: g14320.t1, single gene model update, valid-1, status:[pasa:asmbl_3657,status:12], valid-1 NODE_2164_length_7452_cov_42.9543 . gene 236 622 . - . ID=g14320;Name=g14320.t1 NODE_2164_length_7452_cov_42.9543 . mRNA 236 622 . - . ID=g14320.t1;Parent=g14320;Name=g14320.t1 NODE_2164_length_7452_cov_42.9543 . five_prime_UTR 401 622 . - . ID=g14320.t1.utr5p1;Parent=g14320.t1 NODE_2164_length_7452_cov_42.9543 . exon 236 622 . - . ID=g14320.t1.exon1;Parent=g14320.t1 NODE_2164_length_7452_cov_42.9543 . CDS 236 400 . - 0 ID=cds.g14320.t1;Parent=g14320.t1;3_prime_partial=true #PROT g14320.t1 g14320 MSGGPTKSPYGSFGSPATFGDDGPQSRKRAPSTGPIKFEGQPSKVTVGFAPSLDV # ORIGINAL: g1863.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 29004 29958 . - . ID=g1863;Name=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 29004 29958 . - . ID=g1863.t1;Parent=g1863;Name=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 29812 29958 . - . ID=g1863.t1.exon1;Parent=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 29812 29958 . - 0 ID=cds.g1863.t1;Parent=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 29574 29654 . - . ID=g1863.t1.exon2;Parent=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 29574 29654 . - 0 ID=cds.g1863.t1;Parent=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 29004 29396 . - . ID=g1863.t1.exon3;Parent=g1863.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 29004 29396 . - 0 ID=cds.g1863.t1;Parent=g1863.t1 #PROT g1863.t1 g1863 MDGDVDKYDFLFKVLVTGDSGVGKSSLLLRFVSDTFMEHHVVTIGMDFKMRTMHLEGNKIVKLQLWDTAGQEKYQTMSTSYYRNAHGVIIVYDITNRRTFDDVPKWLSEIRDWAQPNVVKMLVGNKSDRGERTVEYTVAKEFAHDHGMLYVETSAKGATNVDVAFQSLAKQIATSLDLLQPQRSDTISVGSKNNRDGKDDSCCVIV* # ORIGINAL: g1858.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 12831 16702 . - . ID=g1858;Name=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 12831 16702 . - . ID=g1858.t1;Parent=g1858;Name=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 16583 16702 . - . ID=g1858.t1.exon1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 16583 16702 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 16342 16455 . - . ID=g1858.t1.exon2;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 16342 16455 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 15994 16212 . - . ID=g1858.t1.exon3;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 15994 16212 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 15242 15781 . - . ID=g1858.t1.exon4;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 15242 15781 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 14912 15015 . - . ID=g1858.t1.exon5;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 14912 15015 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 14599 14717 . - . ID=g1858.t1.exon6;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 14599 14717 . - 1 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 14357 14485 . - . ID=g1858.t1.exon7;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 14357 14485 . - 2 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 13707 13981 . - . ID=g1858.t1.exon8;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 13707 13981 . - 2 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 13400 13508 . - . ID=g1858.t1.exon9;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 13400 13508 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 13213 13280 . - . ID=g1858.t1.exon10;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 13213 13280 . - 2 ID=cds.g1858.t1;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 12831 13031 . - . ID=g1858.t1.exon11;Parent=g1858.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 12831 13031 . - 0 ID=cds.g1858.t1;Parent=g1858.t1 #PROT g1858.t1 g1858 MLDLNVNKLRWDLTPASILSLANQLATSYKDTYDGIAALKPEEVNADNVVKRLLHFSSSYGTLRALCDFPQHVSAQKEVRDASCEADRQLSQTEVQQSMREDVFASVAAFRAKEDEYAALDAESRRFVDRVIRDFKRNGLHLPAEQRDKIKAMKERLSNICIEFNRNLSEDNTTVPFDEADLEGLPADFIRSLSKDDAGKILLTLKYPHYFPVMKKAKRGATRERMERAFNSRCAVRNTEILEECVRLRHELAQMLGFTNHAAYISAVRMAGSEKAIADFLDGLSSKMDALAKKDMDTFLALKKEEVEANGWEFDGRIRAHDIRYYSTMVEERMHSIDHEALKPYFPLAVVTDGMFAIYQRILGLRFEKEAIGPAWHLEATLYSVFDSESNELVGQFYLDLHPREGKYGHAAVFGLQPGCLDGNGNRQIPVAAMVCNFTRGQDDQPALLAHDEVETYFHEFGHVMHQICSKAKVPMFAGTRVERDFVEAPSQMLENWAWEAESLALMSKHHVTGESLPADIVDKLIRSKNANCGIFYKRQVLLAKYDQAIHTRASADTVGLYGELSKSIMGVEINAGTAFPATFGHLTGGYDSQYYGYLWSEVFSADMFETRFKKEGILNPAPGLAYRRSILEPGGSLDASVMLRNFLGRDPTQEPFLRAKGLST* # ORIGINAL: g1854.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 161 382 . + . ID=g1854;Name=g1854.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 161 382 . + . ID=g1854.t1;Parent=g1854;Name=g1854.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 161 382 . + . ID=g1854.t1.exon1;Parent=g1854.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 161 382 . + 0 ID=cds.g1854.t1;Parent=g1854.t1 #PROT g1854.t1 g1854 GDKEKELGLKVSPFMDRNNPNLPHLQANFIDYLCQPLFEALANLLPKMKIACDYISQNRAYWGERDQLNPGRP* # PASA_UPDATE: g1859.t1, single gene model update, valid-1, status:[pasa:asmbl_2740,status:3], valid-1 # PASA_UPDATE: g1859.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2741,status:12],[pasa:asmbl_2748,status:13],[pasa:asmbl_2749,status:13], valid-1 NODE_182_length_33224_cov_41.2168 . gene 17274 19267 . + . ID=g1859;Name=g1859.t1 NODE_182_length_33224_cov_41.2168 . mRNA 17274 18926 . + . ID=g1859.t1;Parent=g1859;Name=g1859.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 17274 17402 . + . ID=g1859.t1.utr5p1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . exon 17274 17582 . + . ID=g1859.t1.exon1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . CDS 17403 17582 . + 0 ID=cds.g1859.t1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . exon 17767 17944 . + . ID=g1859.t1.exon2;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . CDS 17767 17944 . + 0 ID=cds.g1859.t1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . exon 18177 18302 . + . ID=g1859.t1.exon3;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . CDS 18177 18302 . + 2 ID=cds.g1859.t1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . exon 18581 18926 . + . ID=g1859.t1.exon4;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . CDS 18581 18705 . + 2 ID=cds.g1859.t1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . three_prime_UTR 18706 18926 . + . ID=g1859.t1.utr3p1;Parent=g1859.t1 NODE_182_length_33224_cov_41.2168 . mRNA 17355 19267 . + . ID=g1859.t1.1.5b6be70a;Parent=g1859;Name=g1859.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 17355 17402 . + . ID=g1859.t1.1.5b6be70a.utr5p1;Parent=g1859.t1.1.5b6be70a NODE_182_length_33224_cov_41.2168 . exon 17355 17582 . + . ID=g1859.t1.1.5b6be70a.exon1;Parent=g1859.t1.1.5b6be70a NODE_182_length_33224_cov_41.2168 . CDS 17403 17582 . + 0 ID=cds.g1859.t1.1.5b6be70a;Parent=g1859.t1.1.5b6be70a NODE_182_length_33224_cov_41.2168 . exon 17767 19267 . + . ID=g1859.t1.1.5b6be70a.exon2;Parent=g1859.t1.1.5b6be70a NODE_182_length_33224_cov_41.2168 . CDS 17767 18024 . + 0 ID=cds.g1859.t1.1.5b6be70a;Parent=g1859.t1.1.5b6be70a NODE_182_length_33224_cov_41.2168 . three_prime_UTR 18025 19267 . + . ID=g1859.t1.1.5b6be70a.utr3p1;Parent=g1859.t1.1.5b6be70a #PROT g1859.t1 g1859 MRAAFALVLVALACVGTANAFQIVVDAHAEECFFDVIKKGTKMALAFQVSDGGFLDIDVKILGPDHKPIFNAERESEGRYTFAAHMDGRYTYCFGNKMSTMTPKTVAFSMDIHEPAPAPGDGQNLTPPDVLTHMVAELTDQLENVKKEQEYMELREETHRIVNEHTNSRVVWWSFFEALVLVAMTFGQVYYLKRFFEVKLIV* #PROT g1859.t1.1.5b6be70a g1859 MRAAFALVLVALACVGTANAFQIVVDAHAEECFFDVIKKGTKMALAFQVSDGGFLDIDVKILGPDHKPIFNAERESEGRYTFAAHMDGRYTYCFGNKMSTMTPKTVAFSMDIHEPAPAPGEALVELVMLFVPDYPRPYLQKYTGT* # PASA_UPDATE: g1862.t1, single gene model update, valid-1, status:[pasa:asmbl_2743,status:12],[pasa:asmbl_2750,status:12], valid-1 NODE_182_length_33224_cov_41.2168 . gene 26471 28533 . + . ID=g1862;Name=g1862.t1 NODE_182_length_33224_cov_41.2168 . mRNA 26471 28533 . + . ID=g1862.t1;Parent=g1862;Name=g1862.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 26471 26664 . + . ID=g1862.t1.utr5p1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 26805 26831 . + . ID=g1862.t1.utr5p2;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 26471 26664 . + . ID=g1862.t1.exon1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 26805 26858 . + . ID=g1862.t1.exon2;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 26832 26858 . + 0 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 26982 27085 . + . ID=g1862.t1.exon3;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 26982 27085 . + 0 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 27205 27350 . + . ID=g1862.t1.exon4;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 27205 27350 . + 1 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 27485 27613 . + . ID=g1862.t1.exon5;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 27485 27613 . + 2 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 27760 27866 . + . ID=g1862.t1.exon6;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 27760 27866 . + 2 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . exon 28072 28533 . + . ID=g1862.t1.exon7;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . CDS 28072 28221 . + 0 ID=cds.g1862.t1;Parent=g1862.t1 NODE_182_length_33224_cov_41.2168 . three_prime_UTR 28222 28533 . + . ID=g1862.t1.utr3p1;Parent=g1862.t1 #PROT g1862.t1 g1862 MSDNEGDDQGEVAASPEVHFEPLVKLAPVEVKTFEEDEETVFQMRGKLYRFDDGQWKERGSGDLKLQRHKERNNIRFLMRRDKTFKICANHLLAAEMKLAPAMGSDRAFVWVATADFSEGEARTETLALRLPNAANAKIFKEYFEKAVAYNVDVKAGKTPEAITPFIEEPKKEEEKKEEKKEEKEESKEESKEESKEESKETADLAKEVEKLSVSSDAKA* # PASA_UPDATE: g1860.t1, single gene model update, valid-1, status:[pasa:asmbl_2742,status:3], valid-1 NODE_182_length_33224_cov_41.2168 . gene 19315 21869 . + . ID=g1860;Name=g1860.t1 NODE_182_length_33224_cov_41.2168 . mRNA 19315 21869 . + . ID=g1860.t1;Parent=g1860;Name=g1860.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 19315 19565 . + . ID=g1860.t1.utr5p1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . exon 19315 19629 . + . ID=g1860.t1.exon1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . CDS 19566 19629 . + 0 ID=cds.g1860.t1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . exon 19808 19932 . + . ID=g1860.t1.exon2;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . CDS 19808 19932 . + 2 ID=cds.g1860.t1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . exon 20122 20218 . + . ID=g1860.t1.exon3;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . CDS 20122 20218 . + 0 ID=cds.g1860.t1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . exon 20412 20512 . + . ID=g1860.t1.exon4;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . CDS 20412 20512 . + 2 ID=cds.g1860.t1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . exon 20718 21869 . + . ID=g1860.t1.exon5;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . CDS 20718 21650 . + 0 ID=cds.g1860.t1;Parent=g1860.t1 NODE_182_length_33224_cov_41.2168 . three_prime_UTR 21651 21869 . + . ID=g1860.t1.utr3p1;Parent=g1860.t1 #PROT g1860.t1 g1860 MGSGPSKESPEWINSQAAATNLTYLEVERLAVRFRQLDSNSKGFIDASVLQAPEFDESPFAEDILDFRKKEKIDFQAFLRLFAWWKHVDNGSKLRRIYDILVVDSHTKGKLKEGDIVDILEAVRPDDDEAETLANARAIVAAVDEKKQGYIDADQFVRFASTKLSQETLTSLLAFAIIPGDLRPASSLRDEESETDESDDDEEEDDDSEADAPQRQEIVQQLLKISLDTVGMAKYDEAFVAAKQALIAPTEAWDEFLAASDAFVTVLGLRDGQSGASSSPAQLVTLARKKGLLPMRASLQAESSWIVEEEHGGHAGTTVAHTSGVLAWELKRKDQLKPALVNTIVASKQCVNRLAGSLATVIVKSNAAVARLGEIDEKTASFTADVSRIASSIGIEAPKVEKTIESNRTAVVWAASTVKQLCGEAHEMLAALGKELANA* # ORIGINAL: g1857.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 8873 12510 . + . ID=g1857;Name=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 8873 12510 . + . ID=g1857.t1;Parent=g1857;Name=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 8873 8915 . + . ID=g1857.t1.exon1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 8873 8915 . + 0 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 9081 10522 . + . ID=g1857.t1.exon2;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 9081 10522 . + 2 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 10823 10947 . + . ID=g1857.t1.exon3;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 10823 10947 . + 0 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 11248 11394 . + . ID=g1857.t1.exon4;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 11248 11394 . + 1 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 11585 11697 . + . ID=g1857.t1.exon5;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 11585 11697 . + 1 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 12024 12175 . + . ID=g1857.t1.exon6;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 12024 12175 . + 2 ID=cds.g1857.t1;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 12370 12510 . + . ID=g1857.t1.exon7;Parent=g1857.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 12370 12510 . + 0 ID=cds.g1857.t1;Parent=g1857.t1 #PROT g1857.t1 g1857 MSERKRAYDSDDDQRKRQAKSARDSRFTEVSSRARTRAEADAKDAKDAAVTVHGHGKRGDAAAAAAEAADDDDVGPVPAGEGIHRAKRPKHQHQHFDKLYLERLPESPIYERSYMHRETVSHVVVTATEFIVTASVDGHLKFWKKMDEGIEFVKHFRSHLEAVTGLAVSTDGLVLCSISKDKSMKVYDVLNFDMINMTRLAFEPIACEWIHGPNAPRALVAVASGSEPVINVYDGRGDGTILHVLSKIHTKPVVAMRYSAAIDVVVSADKAGVIEYWSGSELRFPDKAVTFESKMDTNLFDIVRAKANITWIAFSPDGRHFAVMATDRIVRVFRFDSGKLVRSFVETSQSTAEQQTALMATQLAAAEKAKQREKDVANNNNNNSNNNDDDGTPAAPDVPKGAPKGGVEADLLDNIEFGRRMAIERDIDRGGANNAMGCVFDESGTLLLYPTALGIKCMNIRTGLCSRIIGQHESSARFMVVALFQTRGKKRAATIELEAADNPLLKPPTPDPTLFCTAFKKNRFYLFTDRAPAEDAGEIGRDVFNEKPTREEQMAAVEASGTATLAENATIHTSMGDIVMQLFPNECPKTVENFATHARSGYFNGHIFHRVIKGFMVQTGDPTGTGTGGASIWGHEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTIFGRLTKGMEVVQKMSTVKADKTDKPFEDIRILNITVR* # PASA_UPDATE: g1864.t1, single gene model update, valid-1, status:[pasa:asmbl_2744,status:12],[pasa:asmbl_2745,status:12], valid-1 NODE_182_length_33224_cov_41.2168 . gene 30571 32975 . + . ID=g1864;Name=g1864.t1 NODE_182_length_33224_cov_41.2168 . mRNA 30571 32975 . + . ID=g1864.t1;Parent=g1864;Name=g1864.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 30571 30621 . + . ID=g1864.t1.utr5p1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 30571 30671 . + . ID=g1864.t1.exon1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 30622 30671 . + 0 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 30859 31153 . + . ID=g1864.t1.exon2;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 30859 31153 . + 1 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 31402 31606 . + . ID=g1864.t1.exon3;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 31402 31606 . + 0 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 31787 31911 . + . ID=g1864.t1.exon4;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 31787 31911 . + 2 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 32210 32320 . + . ID=g1864.t1.exon5;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 32210 32320 . + 0 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 32439 32582 . + . ID=g1864.t1.exon6;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 32439 32582 . + 0 ID=cds.g1864.t1;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . exon 32817 32975 . + . ID=g1864.t1.exon7;Parent=g1864.t1 NODE_182_length_33224_cov_41.2168 . CDS 32817 32975 . + 0 ID=cds.g1864.t1;Parent=g1864.t1 #PROT g1864.t1 g1864 MFARQLVACGRALPVLRTQRASFSALAQLPDTHEEVRSLCRQYVDAELKSLAAQIDREHKFPAGPVRKLAELGLMGIDVPQELGGTGLDYLAYAIAMEEISRGCASTGVVMSAHNSLYCTPMQKYGNAAQHEEFLRPFASGSKLGCFALSEPGNGSDAGAASTTARLDGDHYILNGTKAWITNGYEADAAIVFATTDKSLKHRGISAFIVPKPTPGLTLGKKEASDKLGIRGSSTCQLIFEDCRIPKANLLGQQGQGFKIAMSTLDAGRIGIAGQALGIAQASLECAVKYATERKTFNKALTEQQFIQGKIADMALAIESARLLTWRAAMLKDSKKDFTKEAAMAKLAASEAATMCSHQVRT* # ORIGINAL: g1856.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 5393 8254 . - . ID=g1856;Name=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 5393 8254 . - . ID=g1856.t1;Parent=g1856;Name=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 8161 8254 . - . ID=g1856.t1.exon1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 8161 8254 . - 0 ID=cds.g1856.t1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 6727 7977 . - . ID=g1856.t1.exon2;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 6727 7977 . - 2 ID=cds.g1856.t1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 6421 6590 . - . ID=g1856.t1.exon3;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 6421 6590 . - 2 ID=cds.g1856.t1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 6108 6251 . - . ID=g1856.t1.exon4;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 6108 6251 . - 0 ID=cds.g1856.t1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 5742 5855 . - . ID=g1856.t1.exon5;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 5742 5855 . - 0 ID=cds.g1856.t1;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 5393 5614 . - . ID=g1856.t1.exon6;Parent=g1856.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 5393 5614 . - 0 ID=cds.g1856.t1;Parent=g1856.t1 #PROT g1856.t1 g1856 MFALHIEIDEEHSLPNDELVSSISTVEHHWGAKSPTRIDKERRRGERIFNTIAIETLTVTTKARGSPGGTHTAEGAPLTLPSNIKTAAITTEGRTMWSSVVAQGTRNDGDGDSATSAALPPADNVRSGKRVVGAPPSSSATVAGGSSATETINIISGNPRVELTKGLLHIYRERAVTDAQGPVAGDKLTTACHVRPGQLPPRRSLTACIVAVPSTMEYRDLLQFLAPLIDTIVHIRIVRDGAPNHYMVLARFARQEDADAFYQHYNGRRFNSLEPEVSHVAFVARIEASWSDRFAETGHSQHTTTPVRLVEIPNCPVCLELMDETATGIMTIACNHSVHCRCMSMWGDSSCPICRYRQKTESNQCMDCDTRDDLWICLVCGNIGCGRYRDGHAQSHFGETQHTYAMELDSGRVWDYVGDNYVHRLIQNKADGKLVELPGNSQPRPVAEGNSGFASDEKADALQLEYTYLLTSQLESQRHYFAAEIDRLSMESDCKMADMQRKARLLDTANTESHAVKERLTSIEKEKKALEKKYVAVTAKATKVEADYAEDRMMFEQVRKNNEEMHKRMEEMETKWKTTVEVKCKEVEELKEQVRDLMFYLETQQKVASSPDRDELQSGQVVIQQQHQPQQQQSPHASSHTHHGDLDGVGERRGSFGKGKGKKK* # ORIGINAL: g1861.t1 original gene structure, not modified by PASA NODE_182_length_33224_cov_41.2168 AUGUSTUS gene 22495 25620 . - . ID=g1861;Name=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS mRNA 22495 25620 . - . ID=g1861.t1;Parent=g1861;Name=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 25502 25620 . - . ID=g1861.t1.exon1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 25502 25620 . - 0 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 25135 25309 . - . ID=g1861.t1.exon2;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 25135 25309 . - 1 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 24812 24895 . - . ID=g1861.t1.exon3;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 24812 24895 . - 0 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 24531 24689 . - . ID=g1861.t1.exon4;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 24531 24689 . - 0 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 24169 24242 . - . ID=g1861.t1.exon5;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 24169 24242 . - 0 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 23681 23912 . - . ID=g1861.t1.exon6;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 23681 23912 . - 1 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 23127 23368 . - . ID=g1861.t1.exon7;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 23127 23368 . - 0 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 22818 23002 . - . ID=g1861.t1.exon8;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 22818 23002 . - 1 ID=cds.g1861.t1;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS exon 22495 22619 . - . ID=g1861.t1.exon9;Parent=g1861.t1 NODE_182_length_33224_cov_41.2168 AUGUSTUS CDS 22495 22619 . - 2 ID=cds.g1861.t1;Parent=g1861.t1 #PROT g1861.t1 g1861 MAEPEVHYSRRCVEKATAAKVTLEQFYEILLAQHKERQERREALETQMTKEGVSDDIKTDRRKVLAHQETEFLRLKRCRLSKDDFETLKIIGRGAFGEVRLVQKSDTGHIYAMKMLRKADMLERDQVAHVRAERDILAEANNPWVVQLYFSFQDATSLYLVMEFLSGGDMMTMLIPSKSDTTRFYMAESFLALHSIHRLGFIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHQTEYYHDLMNTEGRPKPSAIKTEKKIDMSGKDTRSKALTWKKNRRALAYSTVGTPDYIAPEVFKQTGYTKSCDLWSLGCIMYEMLIGYPPFCSDVPQDTYRKIMDWKRWLIFPPEIPISHEAQDLIQRLICEADHRIAQDDLEDVRAHPFFKGVDWEHIREQTPPIDPGVRSIDDTSNFDEFTEQEEEPGVASAEYENTTAPMKDLAFLNYTFKRFEGLTQRGHKLNSRR* # PASA_UPDATE: g1855.t1, single gene model update, valid-1, status:[pasa:asmbl_2739,status:3], valid-1 NODE_182_length_33224_cov_41.2168 . gene 1152 4077 . + . ID=g1855;Name=g1855.t1 NODE_182_length_33224_cov_41.2168 . mRNA 1152 4077 . + . ID=g1855.t1;Parent=g1855;Name=g1855.t1 NODE_182_length_33224_cov_41.2168 . five_prime_UTR 1152 1350 . + . ID=g1855.t1.utr5p1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 1152 1648 . + . ID=g1855.t1.exon1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 1351 1648 . + 0 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 1823 1985 . + . ID=g1855.t1.exon2;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 1823 1985 . + 2 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 2201 2314 . + . ID=g1855.t1.exon3;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 2201 2314 . + 1 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 2489 2582 . + . ID=g1855.t1.exon4;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 2489 2582 . + 1 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 2759 3591 . + . ID=g1855.t1.exon5;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 2759 3591 . + 0 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . exon 3732 4077 . + . ID=g1855.t1.exon6;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . CDS 3732 3945 . + 1 ID=cds.g1855.t1;Parent=g1855.t1 NODE_182_length_33224_cov_41.2168 . three_prime_UTR 3946 4077 . + . ID=g1855.t1.utr3p1;Parent=g1855.t1 #PROT g1855.t1 g1855 MADEELSFKKWKRAANSAITSDVKSDVRGIHSDRSSISSRGAPLQRHESSSSTFARENNSRSSVDASGLKGDSLGPRASQSNPPLSHQRVDHGAPKTVEDHLRTFVSNFVTAAFHPGNVSSNATGRDGASRTSSQPGSPTIARRGDPMGAGTGSGSQITRAHWKPDALAMHCAHPGCRVVFSLTDRKHHCRKCGDVFCAIHSDCVMKLDANAGHDVDNGTLQKVCFTCFESREGYAPTLGVTTRHLQHFLRHRRHHIDALTRYSDELSGRLSTLADLRAENVSGSALRSREMALVVWRPDWMSDTCTSCGVAFGLFLRRHHCRLCGTIICEECCSLGPHTPRSFGGANTTYSATKPKVPPPPPPPPHPRGPVEVRVCTGCLERLEWREKREMGPRGRTSMGGLDFGDERPPVCAMYQKLRATKAELEQKMYEWHELTESINAAAGRLGGGDRNGGDAYAWVDDDGGQRAADNTPLSPILDSRRTNAKDVVTKLFVLYQELGTRISRLPARCETEKRVHSSINLAVCQYLQENKFGFLRATVRDREEGRSSPSVSRPSTPLRTQPARIKDAM* # ORIGINAL: g2397.t1 original gene structure, not modified by PASA NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS gene 467 1041 . + . ID=g2397;Name=g2397.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS mRNA 467 1041 . + . ID=g2397.t1;Parent=g2397;Name=g2397.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 467 764 . + . ID=g2397.t1.exon1;Parent=g2397.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 467 764 . + 0 ID=cds.g2397.t1;Parent=g2397.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 968 1041 . + . ID=g2397.t1.exon2;Parent=g2397.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 968 1041 . + 2 ID=cds.g2397.t1;Parent=g2397.t1 #PROT g2397.t1 g2397 MTSATSSLRARSPQSNKRLLKTSVVDLVVATPSAKIRGANLAVRCVGNDATADTCDMAAIRSTLATGIKERLAAMYNYTGETVCDLFIDSQATSAEIEHPARFADHETSFETTPFTNLCLKSV* # ORIGINAL: g2398.t1 original gene structure, not modified by PASA NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS gene 2372 3414 . + . ID=g2398;Name=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS mRNA 2372 3414 . + . ID=g2398.t1;Parent=g2398;Name=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 2372 2755 . + . ID=g2398.t1.exon1;Parent=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 2372 2755 . + 0 ID=cds.g2398.t1;Parent=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 2820 2964 . + . ID=g2398.t1.exon2;Parent=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 2820 2964 . + 0 ID=cds.g2398.t1;Parent=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 3239 3414 . + . ID=g2398.t1.exon3;Parent=g2398.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 3239 3414 . + 2 ID=cds.g2398.t1;Parent=g2398.t1 #PROT g2398.t1 g2398 MSEYRCSLCASSVQAVEAVKHLTPCIQSWVDKVLVNSETMLKGNHETLRTSLNDVIATVASMGSSITALESNSVLASKQIEALNTKLEDFENRLAHGQSAPKQTLDDNLEALLNRVDLLERVIGSVSKRTSLPIGISLVTEGIEQNKATLRIVAEFGTATTAIARQHDCAEKGRDLAVGNVNAHAVAMLIAGTAAGAGARGHQGLSGNFADERFAQKVSHREAVVSFLSRSALS* # ORIGINAL: g2399.t1 original gene structure, not modified by PASA NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS gene 3610 4912 . - . ID=g2399;Name=g2399.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS mRNA 3610 4912 . - . ID=g2399.t1;Parent=g2399;Name=g2399.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 3775 4912 . - . ID=g2399.t1.exon1;Parent=g2399.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 3775 4912 . - 0 ID=cds.g2399.t1;Parent=g2399.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS exon 3610 3668 . - . ID=g2399.t1.exon2;Parent=g2399.t1 NODE_2842_length_5000_cov_46.6753_potentialcontaminant AUGUSTUS CDS 3610 3668 . - 2 ID=cds.g2399.t1;Parent=g2399.t1 #PROT g2399.t1 g2399 METIDYDSERLFMVIGDGTVGASEVSACGAFTPLQFGESSSWSDSAFTVPYNKYAGMQFLSSPMITTEVDEECARSKSTARGYLHENVDVQATEDTIELASGTVDDDYTVSPTFQSLPEETMGRSGMAPTPLFGVQCAHHVPCQSAAASRASGEAPVFFGEVPSTAVLQVANAWLGQHGRGAVKRNSLRTTASAYLRAHTPRPFIPNTQMPIAVNSLTSLRHDNVTAVGDCSPSHARRRLPGVAVAATLRSTSSSAIGGPLKHCVAKRRSSSCPTQSDAIGGPLTDSSSMLDRYQSPVADQSVAQRDIAKDRVAPAIITDDKAEECDNGEVVVVSVRGQGRGGDTTPRGRGRGGRGRPRGHGGRGRGTPVAVVHDMELQGKRPNDSETPNAKKARTDE* # PASA_UPDATE: g13931.t1, single gene model update, valid-1, status:[pasa:asmbl_4775,status:12], valid-1 NODE_2674_length_5479_cov_31.5444 . gene 343 3967 . + . ID=g13931;Name=g13931.t1 NODE_2674_length_5479_cov_31.5444 . mRNA 343 3967 . + . ID=g13931.t1;Parent=g13931;Name=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 343 420 . + . ID=g13931.t1.exon1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 343 420 . + 0 ID=cds.g13931.t1;Parent=g13931.t1;5_prime_partial=true NODE_2674_length_5479_cov_31.5444 . exon 856 995 . + . ID=g13931.t1.exon2;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 856 995 . + 0 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 1272 1368 . + . ID=g13931.t1.exon3;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 1272 1368 . + 1 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 1775 1935 . + . ID=g13931.t1.exon4;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 1775 1935 . + 0 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 2128 2221 . + . ID=g13931.t1.exon5;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 2128 2221 . + 1 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 2396 2547 . + . ID=g13931.t1.exon6;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 2396 2547 . + 0 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 2882 2963 . + . ID=g13931.t1.exon7;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 2882 2963 . + 1 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 3424 3513 . + . ID=g13931.t1.exon8;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 3424 3513 . + 0 ID=cds.g13931.t1;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . exon 3806 3967 . + . ID=g13931.t1.exon9;Parent=g13931.t1 NODE_2674_length_5479_cov_31.5444 . CDS 3806 3967 . + 0 ID=cds.g13931.t1;Parent=g13931.t1 #PROT g13931.t1 g13931 ATQTTDATSGWWLSALDASGWLRHIKGVLDAAVLIVRAVTKEGSSVVVHCSDGWDRTAQLCSLSTLLIDPYYRTIKGLIILIEKEWLAFGHKFGDRCGQLTKDHKERSPIFTQFLECVWQIMQQFPPYFEYNERFLIALHDGVYSCEYGTFLGNCENFRWREKNLPVITDSLWPALMARVDEFTNPLYQAKEGVLWPSSRPQRIAPWFSLYARFKSELHPRESYGDSVLRLVESIPVDESRLDHLVVTLALWDTEKAKEYSEGATPQKVDVEPPEWQNERVVFRCPICVCNFDPLSRKHNCRACGQIVCGTCAAVKMAIPAMGFATPVRVCKRCAKKSVSADASEAPQVAA* # PASA_UPDATE: g7395.t1, single gene model update, valid-1, status:[pasa:asmbl_1886,status:12], valid-1 NODE_1530_length_10673_cov_42.931 . gene 277 10063 . - . ID=g7395;Name=g7395.t1 NODE_1530_length_10673_cov_42.931 . mRNA 277 10063 . - . ID=g7395.t1;Parent=g7395;Name=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 9870 10063 . - . ID=g7395.t1.exon1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 9870 10063 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 9455 9595 . - . ID=g7395.t1.exon2;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 9455 9595 . - 1 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 9138 9251 . - . ID=g7395.t1.exon3;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 9138 9251 . - 1 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 8884 8928 . - . ID=g7395.t1.exon4;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 8884 8928 . - 1 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 8400 8527 . - . ID=g7395.t1.exon5;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 8400 8527 . - 1 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 6950 8216 . - . ID=g7395.t1.exon6;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 6950 8216 . - 2 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 3897 6708 . - . ID=g7395.t1.exon7;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 3897 6708 . - 1 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 3326 3616 . - . ID=g7395.t1.exon8;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 3326 3616 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 2845 2964 . - . ID=g7395.t1.exon9;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 2845 2964 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 2562 2628 . - . ID=g7395.t1.exon10;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 2562 2628 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 2160 2275 . - . ID=g7395.t1.exon11;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 2160 2275 . - 2 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 1771 1920 . - . ID=g7395.t1.exon12;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 1771 1920 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 1478 1573 . - . ID=g7395.t1.exon13;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 1478 1573 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 1172 1246 . - . ID=g7395.t1.exon14;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 1172 1246 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 704 815 . - . ID=g7395.t1.exon15;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 704 815 . - 0 ID=cds.g7395.t1;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . exon 277 518 . - . ID=g7395.t1.exon16;Parent=g7395.t1 NODE_1530_length_10673_cov_42.931 . CDS 277 518 . - 2 ID=cds.g7395.t1;Parent=g7395.t1 #PROT g7395.t1 g7395 MDNTRDSAGASALVECVFNGTLPYANAIPAEADAFLVDIKAGLSAAVQSSNLRPGTTFWTRRLEQYLDLYKLRFSLADHVALVHTYFDLLVTPGLDFGLQQSYAHILGRLLSKRNAIPASALSIPWRPLYDIIDKTYFTSNRSAIYVRKEQHSAALVQLVEKARRYFPDGAAEEIIAEFRPLFCLHDDLLFKGHGFTCLFLPTHHLPRTGDTPSWFDELMRYWDLVDNMTEWDLQFLSLFARLADDTVGRFDWTPHIPRLFTKILRILDVPVGSPGKSDASTVHKSGLPHRYAFLMPTDPIIKASGRVVVCSRLVVSMLGPDGKAQHQLSSLLRAVGNFYHPSNSGAWSGRLSAFMVCLTRDFSARMKEEALGDAARIPAHYRLRVEDREAFARAVAPIVLLALYAKSPTSVFSATMAAKQLSAIDPQSILPPLLEAAYPALETLTETHRTISTISCLSLVASSLARHQRFAEGPSHILPLLRLALPGIDVIDVIKTEATLRFLGAVLMCVPVVDVSRALDNSASGRGGGRGGGDFGFEPTADTRSSEEAAEDAVRSTSQFGDWVSQLLDRVFLYMDHQLEQSEARPGQRRGPMAAADAAIAGLMVVTMDQLFAQLSPEIYDMALEKVWRFVQTHLRLNSVKLAAKLCAAATFTNPHKALAMIAPQLIHRIVESIGTEPRPVVELFQLPKQEGVGAAASSAPSTTKSGSAASAREENDLGDDIKWNGTILMHAVRDTGSALLPHVSGINRVLNLSLDPHASWALSRMGAKLLRNALNSLVAIYPREMKTVHPSSPIFKAAAGGLSGDARTILETWASTYNPEALDMAWHVPTEDEWSAAAALATEYGSAAVALLKSLPTVNIPTEAHAIAAARSAIRRALLVLRAIVTSFLSFIPDRDDGPPPPAAHVGEGLVSDGHHEGNDDDGDADDAPFDMFTKRATTGQLPRKELLDRLVDMRAECMDALHAAASGLSRFGGDDTRTFILLVKAIEALLTERGIKSKDHGRYKKGYDVIKRLVADDTEPHKRHCRPLLAIRANLQHIRRLHSLRLSAVQGPRQFTLCHDLLSLCMHQYAEVRKRAQTSFRETMSSFPRFKDRAFSRLIAVMGEASKIAPDDKPDHSQLQGALYVLLNRAMLRTAARRWDRMGSFVSHLARLDVIEQHSIQELVRKLFYTFTNEFYTLPLSQNVSESTQRIASALDGKVIDTVAAASGLKRVRDRYEKAEKHYNSLVGTLSQMLLGAHLHWRYENKLAYFLIMLLRHDRQTPTITTEWALKALVSDAPTVRRLAVDAVSTVLYLNKRRSPKMLLPVTETSYPDAKNNAIMVSASAPDALPLGARPSNDWYSYHDALMPTTEAEHATCFFVDKNHEGWNAFGSRGLLGYTYGSRGVLVTTDNAPASRHAEAASQYGALTNGILPGGAGGIERIVKWQLYEEANLNDANKAVLSFLRNEAQMTRLFMFLDQERGKESDTGFSESHAQLFFGLFRNFEDTAVAIVRPHLEKLCASTDTHSQRAASEVIAGLIRGMKHWPWKAQEACWDYLIPLLRRCMEGANNDTIGDWIASVRFAVFDRDPRRFPRLTSLLLESPIDPSGSSSSFADFRRMQLAHVLLEELSWRGAEPSLVMLNRLLGHVGHPYKLVRERISSSIALAIRNTHVPGRRFWVSPMCEALERTGTLVLPGDFVSRTVDLLSSSTVPHAAPVGPPAAGSQASTTGDSVEDEKLRTCKTVLGWLTVAFWGGGAKSTLPFVDAVLPVAIARSQERINDEELQLLAGQSIALISQASVGADDVSRMVRTAQEVLGIHSWHARIAILQFLQVMVFRSLMQLSNAMLDSIVGILVGLLSDERLEVRELSSLTLGGLLQCEDRLEGYNLLAKFSSWSRTPLPKTARKVGSVSTSDVRPASPANMLSAAGVVAAPSADRRVETVPASGAWAGPLAVRHAGVLGLAAHVIAAPYDVPAWLPDVLMELGTHVSDPVPIQVHICICPLFFS* # ORIGINAL: g13543.t1 original gene structure, not modified by PASA NODE_1250_length_12758_cov_43.3127 AUGUSTUS gene 11298 12645 . + . ID=g13543;Name=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS mRNA 11298 12645 . + . ID=g13543.t1;Parent=g13543;Name=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS exon 11298 11376 . + . ID=g13543.t1.exon1;Parent=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS CDS 11298 11376 . + 0 ID=cds.g13543.t1;Parent=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS exon 11940 12374 . + . ID=g13543.t1.exon2;Parent=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS CDS 11940 12374 . + 2 ID=cds.g13543.t1;Parent=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS exon 12524 12645 . + . ID=g13543.t1.exon3;Parent=g13543.t1 NODE_1250_length_12758_cov_43.3127 AUGUSTUS CDS 12524 12645 . + 2 ID=cds.g13543.t1;Parent=g13543.t1 #PROT g13543.t1 g13543 MGEFDSVLRDVIAALPEVCASPSFQDVRLPYKWPPLFSLETAPVLITRPTTRDSASPAKSSPAPSPNAKTHKTSAVDASPAEAVDVVTVNTYCDACKKKFSSDATYTAHLRSAKHLKEAKVRQVTKGGGLSPSSSAVQRPIALVKPVTLGSTPAGSPVNTTSKAARDRGLADCFYWQTTGHRMLSREQSGGIVLLVGAANGVFNSRLHMSQ* # PASA_UPDATE: g13542.t1, single gene model update, valid-1, status:[pasa:asmbl_956,status:12], valid-1 NODE_1250_length_12758_cov_43.3127 . gene 57 10297 . + . ID=g13542;Name=g13542.t1 NODE_1250_length_12758_cov_43.3127 . mRNA 57 10297 . + . ID=g13542.t1;Parent=g13542;Name=g13542.t1 NODE_1250_length_12758_cov_43.3127 . exon 57 9797 . + . ID=g13542.t1.exon1;Parent=g13542.t1 NODE_1250_length_12758_cov_43.3127 . CDS 57 9797 . + 0 ID=cds.g13542.t1;Parent=g13542.t1;5_prime_partial=true NODE_1250_length_12758_cov_43.3127 . exon 9921 10297 . + . ID=g13542.t1.exon2;Parent=g13542.t1 NODE_1250_length_12758_cov_43.3127 . CDS 9921 10202 . + 0 ID=cds.g13542.t1;Parent=g13542.t1 NODE_1250_length_12758_cov_43.3127 . three_prime_UTR 10203 10297 . + . ID=g13542.t1.utr3p1;Parent=g13542.t1 #PROT g13542.t1 g13542 VPRLNVKLQLPRTSTILQNMDDPGAPYWVIEGFKFDLQHTVYREVSPKNIDMLCLNFSARKLTLIAFGFFVRYVLFIKDNYFGDTTEIVSLNELKQKMTAGWPPQPTAPATPENAMEVSVGVHVLNATIELPQTLYANDPDCARIRFAELNLDVRNTLEYMDLELNASPLLLVPSPSLTRSQGIGGPIRGGRRSVVEPPMRRSTTTALFDAGEDDILSDCLHIDGLTLQGHRYYGPPPLAIAYASRYNIAVGAITGRPSPALLVAVASWGQRFGYHFKDSDNALYVGDIPEEVDDMHTTLSLLTGPVNIGVSTDDACIIAQIPDGVAVKSDSLVMDESKKRVSITLDRIALMALSACDDSETSGGAAGAAGGMGRVSVEAGKDEWLEVARVVAGVRVSLVDVSADWMANYKRQRRFLSTEDRDRKLLDFLWETNAEQTGQDDADADAALDDEDALLVNELLEGGDGEASDTGDLASDDRNDDSDPESLSGFHGMLDENATASRSVARRLSASLAAPSLFRSPADFPVRTGRRGSSISRREFARDDSDTVSFAVPRFDEALVEEESASAHESDSISFHSARSSYSGGEDGADESQGSVYGDAQSHHDASDDDGATSVPLSRRMSGRRRSSVASTISARRIVPAQSTYRALLPSRVLGKRTGLALRARPASLFALPVAPPPIDSCDSDDDGEPLANYGSRALSATPALDLADSFGNRPGSLSRDRLKSRNFSVRARSKASFVDTLAGANVKMTATTIATFTRPVEVVFSPLAALCLSDLLDNAFVGNPLRPNDVLDSLLLSYAGDAGRLPASGVCARERLILSVPKLRIASVQDVPEAPAGQSRARRPAPDLSGSLFSGADGSGSAPTSCSLVEVCFDDITAIASFAVKSVEKERAVRPGVSPAAQGQPVSAVPAHAVHLETLPVEGSGRATIAGIRMSLSTFRLCDAAEADPATPLWGAEFKRRALSLDSAHCHPVVKAAVNDVSGSVCRSSLDNSQARITVGNVWLCSSRGAVPVVVGLANAWRSHLSTIVAVAAERTDDYRRYRRRFVSECGRITRAIRVCCTPIIFRDAWRVSSRLDHELQWRLLMHFRHCMLLARAQATGHKSVFFSGPPKARRRHRHEVQPSIATGMFLKDASFSETVANFSTWLQIQGPGADGELWEMMAPIFGVEGHGGIRANDRPLGLRPGMRLSVSAVLNHASASLLTSMEESSTAQWQADSATGRSRDTLIVLRNAGVDCVAAFQEPTTSFLENAQRGRYTPANIATLDVRVAGRLGVLSWHAQTAVVPFITDVMRSVVADDQPTAEDDGVASMRRSSSVPEALHSPGGMARSHSVASMGGEGFEMQPLGVSAALRSMPMLASGGMGIDASERLRAPPDRHQRHRLLMQVVFVADRMSVSTAFKDVKAELSLGGLQLSVASADGRGTPDLPSVGERDSPLNVRKVTSAIAHVERIDLDIVSLTAVPEVLVTGAPGVSTGALGGNTLGLSQSARFDGGLPADESAICRAQVRRFCASASSVVDGRGVRDGAPPLTTDSFVAKWAAFEVNVLRSLSQMDALVEKWTIAIEREGRRFIRALPRNAQRAKRLEAGVAAHMPRPAKHVVISLPNFSVGANLLPALRVQYTVPTLAASYFTHHDGTEQIGAEVAHHRVTFRTRIYGDSHGNRDHETQRPAKGLGHRAPKRGADMRTASIALPRIVMKLVSTNVDAHAHMSTPPAERLWNSPRKRVHASCAVVIERVVIALSTDVIGHLVLVQKALQREASRLEHVLRAREEAALAASRSAFMSQRRRSSLVDPTEGSGAADDAAAILPAAPLRTYSARVIFEGMSASASSTEYTVSLRTNDFEALLSSRLGRSQLQELKKTKVVVNWNVSVDVLCTLTPSKTLPEPAASALSMLPNSGDLAFFKSGLALRNTAESSGDMPAEGGAAADTGDMSTVWLSVASTSALIPSAAFDKGTGLWVELQASVDFWQGLYDAMCADARRGFDNPNQIAYRTPMSRSPSISRKTSFNRGPDGAPVAATHSTPIADHVLRKTFVRVTVDHICIAIPLDIRMVADPHAADLFGREGPACVVAIESMNFSAAGSDTSAGSFNSFAAHFVECFNPKSHSFYDQVTENAINVAMVPRGTYKLCSVVERQQDALAAGVGMGMNRMTMALDWHMSGLMIDLDTRIGEYLTLLGEAVTSLSASSGLQAAQAAQLQRRASQLSSGSQASRHLAHHSFSGLGSASGSLSSLAVPQASPTDMPSSRTALGSVAEDGDAPSVALSVPSLAYADRSAPGRIPPLPRRASALSFNPEQVPLGSQLGSGGPRHKRARSMSVVGSAFPVVVPELPVPTPTNATSPAHATGEDEPDEEMAELPELDFHLDVSVQIDHGMCTLHPAEQSAQQRQLQLLQLQANQRVQQQAKTGGTATDASNAPPHDRNTYILIPGISVRFNYQSMTGVWHDEPPASPGVDGAQARAPTVFKDARLYGECVIQSLPRALVFRPCLLEYIDEVINARQSRLRGHNLFSSASTRVPDQGVGITPPAPSVGNIGGKAAAATPEASAAIASFPISVVLALSVHPILVEVNCIPVSQVACKVRLPALNVFLSSRPNSSGPLSSHPTQFSGNVGTGGAQQPTSQYVTGVLSDFSLNLLHPYSPVECLGIEVRRVKATVNRIHTASYPLVEGICDVGEVLLNYNIRQLDELLVFKKVWFGRQLIWKLLLGNMYDDSVVLPGSSSIAGGDRQQGADGEPDERKPAPTSVGADAGLKTAPVLLYMGRIRQLSVAMNLGQTIGKAKWSTRNLFSEGRVNFGGDQSILMRYSVGHSQLSSKGGLLSGFVELSKIGLAVAQRDPDMGRASATAVGDTAAGFPAGHSRHVAHDPGLESETHPGHATGRRKGKGAGGTHPQCLDRLALRVESVKASLEYNRSRVLVMELQDVNAAYHDIWSLPRTKLSAPLPMSLFAAVDLRSVRLIVSKETVPSFGSIVALLSAMMSEQKAKVYNFKLNLLHNATAAASALGDDDALELVAGRRMRERQVEAALASSEAKHAPIAELLRIGHLSVRAQEATVACFWHTFLDPDWLLLELAGLDVTFRRKRGGRSNDMCDEQLNFLVDGGPLKASGLRIQKREDRATQMRRGRREEADAMTPFQWFQFVRTARREYDIFGIPHFQLDLDSRRLLSASPVVIHCKLLTEFREGIAVSLDVSLYLYIRSLVSIYQDEFSRRLSSAVQNKMRRQREKDGMAIDDNAQLDASPTPAEAFDIGPPASSRQYRCDPEHFVLQPELKLVSYAGNFTPPDLEWLLDKLGFGDARGTIPKYVHIAGVESLDKLTSAIAELCVRDGTPWTMLPVQADGS* # PASA_UPDATE: g428.t1, single gene model update, valid-1, status:[pasa:asmbl_6735,status:12], valid-1 NODE_3927_length_2504_cov_40.9584 . gene 951 2389 . - . ID=g428;Name=g428.t1 NODE_3927_length_2504_cov_40.9584 . mRNA 951 2389 . - . ID=g428.t1;Parent=g428;Name=g428.t1 NODE_3927_length_2504_cov_40.9584 . five_prime_UTR 2192 2389 . - . ID=g428.t1.utr5p1;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . exon 2165 2389 . - . ID=g428.t1.exon1;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . CDS 2165 2191 . - 0 ID=cds.g428.t1;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . exon 1369 1855 . - . ID=g428.t1.exon2;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . CDS 1369 1855 . - 0 ID=cds.g428.t1;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . exon 951 1186 . - . ID=g428.t1.exon3;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . CDS 1116 1186 . - 2 ID=cds.g428.t1;Parent=g428.t1 NODE_3927_length_2504_cov_40.9584 . three_prime_UTR 951 1115 . - . ID=g428.t1.utr3p1;Parent=g428.t1 #PROT g428.t1 g428 MDALEQHILDMQKIMDNMKKQMSENELRMSEYAALFKDKSRAPALLRLMLPNQPDARTSTQDPPPLPRDHQDSTRLLNAKNANAMSLPVHLLTGLCDGGPVTFSIVDRGQSGQGSGDRGVTTAGAPSSNNADSLPVAGTGEDGPFEILRSEIGGIKRRLGEVVDGDADDFCDDAHKRQRQSPTDGIDGTGSCNQ* # PASA_UPDATE: g9312.t1, single gene model update, valid-1, status:[pasa:asmbl_5599,status:12], valid-1 NODE_3125_length_4249_cov_35.89 . gene 184 2987 . - . ID=g9312;Name=g9312.t1 NODE_3125_length_4249_cov_35.89 . mRNA 184 2987 . - . ID=g9312.t1;Parent=g9312;Name=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 2916 2987 . - . ID=g9312.t1.exon1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 2916 2987 . - 0 ID=cds.g9312.t1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 1907 2029 . - . ID=g9312.t1.exon2;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 1907 2029 . - 0 ID=cds.g9312.t1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 1489 1590 . - . ID=g9312.t1.exon3;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 1489 1590 . - 0 ID=cds.g9312.t1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 1054 1242 . - . ID=g9312.t1.exon4;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 1054 1242 . - 0 ID=cds.g9312.t1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 633 854 . - . ID=g9312.t1.exon5;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 633 854 . - 0 ID=cds.g9312.t1;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . exon 184 306 . - . ID=g9312.t1.exon6;Parent=g9312.t1 NODE_3125_length_4249_cov_35.89 . CDS 184 306 . - 0 ID=cds.g9312.t1;Parent=g9312.t1;3_prime_partial=true #PROT g9312.t1 g9312 MDPISEREQLYKLILGQLRHDGYEAEGTGEYGTKPSAQVGEASRLDFDAITEDRLGSKAAPDYKTIFVTSHKGSCRAAAFSMDGRIAATASADMSIKVLDVSKMAGRGDSGSAAGAAQAATMMTEEEKAESKPVLRTLYDHLAPINCLAFHPHGRFLASGSQDRTVKFFDHVRLSSKRSMRAIQESHNCRTLSFHPAGNHLLLGTDHPVIRLYDVNTFQCYAPSNALDHHKAAVTCVAYAPKGNMYASCSKDGAIKLWDGIGSRCINTFAGAHDNAE # ORIGINAL: g8202.t1 original gene structure, not modified by PASA NODE_3689_length_2948_cov_34.803 AUGUSTUS gene 182 1016 . - . ID=g8202;Name=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS mRNA 182 1016 . - . ID=g8202.t1;Parent=g8202;Name=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS exon 951 1016 . - . ID=g8202.t1.exon1;Parent=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS CDS 951 1016 . - 0 ID=cds.g8202.t1;Parent=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS exon 671 751 . - . ID=g8202.t1.exon2;Parent=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS CDS 671 751 . - 0 ID=cds.g8202.t1;Parent=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS exon 182 319 . - . ID=g8202.t1.exon3;Parent=g8202.t1 NODE_3689_length_2948_cov_34.803 AUGUSTUS CDS 182 319 . - 0 ID=cds.g8202.t1;Parent=g8202.t1 #PROT g8202.t1 g8202 MASEVERLCTYILRDHFGDAVGAIGNVLCRRGRLNLRDIAIHTKLSRTQHGLVAYDVGGGIDPPVFYELVPDRVLIRIRHPKFIQAAKNFHGAVA # ORIGINAL: g9777.t1 original gene structure, not modified by PASA NODE_3016_length_4529_cov_41.3222 AUGUSTUS gene 123 2625 . - . ID=g9777;Name=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS mRNA 123 2625 . - . ID=g9777.t1;Parent=g9777;Name=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS exon 2601 2625 . - . ID=g9777.t1.exon1;Parent=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS CDS 2601 2625 . - 0 ID=cds.g9777.t1;Parent=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS exon 690 2274 . - . ID=g9777.t1.exon2;Parent=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS CDS 690 2274 . - 2 ID=cds.g9777.t1;Parent=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS exon 123 277 . - . ID=g9777.t1.exon3;Parent=g9777.t1 NODE_3016_length_4529_cov_41.3222 AUGUSTUS CDS 123 277 . - 1 ID=cds.g9777.t1;Parent=g9777.t1 #PROT g9777.t1 g9777 MDLEASSRFTSADQIDPYEGKTYEERASLRALRRKLRSEGDAPSSSLPRSPSGRALSASASAVQLRSTPSAHPVASRGLSLPERALSLDRLKFFEGESVASGSAQSQRLGAIGIESPAVSLGKQGESSESSERGIAVGSAEVSPIKAADKSRESVTASPTRVADIVTAPAVTPVDIHQSIPVDIQQSTTQSIKQEQVAPESESLDGGSPVVVKEDRDLPGKSVDRASSRSAAEGKPLFSDASDLAGDSVEEDRVLAEGPSCEQKIEEQQDLPEITEFVTSSARDELTSAEFNSACTQGVSVQEEEEAEGVSASSREERIAGLRRLSFKQSRGQAGHFESGSTLHTSQDLQQLVEEHPVLLELSHGSSHSIGVTDSDISKSNDSNNCNSNDNNDRESSLNLGADGQAHSAHGTRLTLQAEGASESQVPSRSDSTDERVSRVDSSVNGQTDKGSVFSSPSLAAETVEKGVEEEREKKEERESALIPQEPSGSAGIEVRRRPSVAGMEAVEDAVMGMATLERKASIEGKASMARSASNERLRRRRSTSMDYSCTPIKDEEPPSFTPDLSSLIRAITAKAQTQAFELNLMVA # PASA_UPDATE: g11168.t1, single gene model update, valid-1, status:[pasa:asmbl_4317,status:3], valid-1 NODE_243_length_29520_cov_41.8409 . gene 5 3492 . - . ID=g11168;Name=g11168.t1 NODE_243_length_29520_cov_41.8409 . mRNA 5 3492 . - . ID=g11168.t1;Parent=g11168;Name=g11168.t1 NODE_243_length_29520_cov_41.8409 . five_prime_UTR 3319 3492 . - . ID=g11168.t1.utr5p1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . exon 2517 3492 . - . ID=g11168.t1.exon1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . CDS 2517 3318 . - 0 ID=cds.g11168.t1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . exon 1908 2367 . - . ID=g11168.t1.exon2;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . CDS 1908 2367 . - 2 ID=cds.g11168.t1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . exon 621 1581 . - . ID=g11168.t1.exon3;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . CDS 621 1581 . - 1 ID=cds.g11168.t1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . exon 5 420 . - . ID=g11168.t1.exon4;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . CDS 40 420 . - 0 ID=cds.g11168.t1;Parent=g11168.t1 NODE_243_length_29520_cov_41.8409 . three_prime_UTR 5 39 . - . ID=g11168.t1.utr3p1;Parent=g11168.t1 #PROT g11168.t1 g11168 MQHSLERVRCDRRRRHCSGATAKVAFPAPLGLVAVGLATLVALAQFGSFGVAHSIGAHSADFEPSEGHVCIHDDIAKADDLLAPLKGQAHLDYGMPGADSATNRRRQRGVGNDDEYQPIRITPYYYNIDSNVNAAITKAKADFIKSYLIPTAVARFKEMLRVIPVQGNLGLTFPCNGLLECDDGRRRCSMYNTDMFCGGTVKVPRAHLGKLTVYSECSETGTVDDYGGGVPDSDFILYVTAVTTNCAASTIAYANWCSQDQNDRPIAGYVNLCPSKVDPFAANVEDQVIVALHEITHALGFSAALFPYFHDSTGAPRTFRDRFGSPSAIHASYQNTVKTAVDATLGKSVSKVVTERVVTELARHSNCSSITGAELEDGGGASTAGSHWEERVFNNEYMAGSLKARPVISAMTLALLEDSNWYRANYAAASTLTWGRKAGCDFFSKKCISTNADTGELQTSIGDPRYFCVSNYNQQGFLCPLDQAIKGTCGIGCTWDGGASAGCPRVRYNTAIPSNFQYFGDTNVGGNQPLGDYCSYWQGLNNGVCSTGSRCIMERQRFVQSLYPMCYAATCTVDNAGTRIVRFDVGGTIDCAVAGDVKTMDDGRVYVCPNVADYCPQGDCPNDCGAGVCVEGLCRCSDGTTSEVTCIKKTYGWVVVQYGACDAPCNNGTKLPATYECHDLGSGELAPSSRCKDIAPPTTAVSCNPEPCAIHVVKYGPCTATCGNGISATLLECREPYGNSTVQDGFCAADANAQLLRFVPCSSECRGEWLSQNACGASYVLWVPALMNPSHVAAIFRLFGALFSLRMRRLLNGFKCSRRFPFSQQRISLCNNLCNCNCRFFLSDLFCPLSLSFSLLSLLWSPWAQRL* # ORIGINAL: g11172.t1 original gene structure, not modified by PASA NODE_243_length_29520_cov_41.8409 AUGUSTUS gene 17432 18191 . + . ID=g11172;Name=g11172.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS mRNA 17432 18191 . + . ID=g11172.t1;Parent=g11172;Name=g11172.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 17432 17954 . + . ID=g11172.t1.exon1;Parent=g11172.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 17432 17954 . + 0 ID=cds.g11172.t1;Parent=g11172.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 18106 18191 . + . ID=g11172.t1.exon2;Parent=g11172.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 18106 18191 . + 2 ID=cds.g11172.t1;Parent=g11172.t1 #PROT g11172.t1 g11172 MHRATGRGMRAFPSPAATVPASPAPHCFDSPWQSGRYVTPVPSRPATGSATPSQWRSTSNGNTPGLVPCTPTAAPESPAIDAYAVQAQAPHANPTANPLRTHSYGATALRSRSSSRRLTEVVRAAECASHATTAVTETNAASAMPGRHASPTPLSHPTLADPPTSELDMNVSLWEQTVPSHDDEHESPSGAEVDLFASPSSI* # PASA_UPDATE: g11169.t1, single gene model update, valid-1, status:[pasa:asmbl_4315,status:12], valid-1 NODE_243_length_29520_cov_41.8409 . gene 4328 7595 . + . ID=g11169;Name=g11169.t1 NODE_243_length_29520_cov_41.8409 . mRNA 4328 7595 . + . ID=g11169.t1;Parent=g11169;Name=g11169.t1 NODE_243_length_29520_cov_41.8409 . exon 4328 4669 . + . ID=g11169.t1.exon1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . CDS 4328 4669 . + 0 ID=cds.g11169.t1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . exon 4819 5640 . + . ID=g11169.t1.exon2;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . CDS 4819 5640 . + 0 ID=cds.g11169.t1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . exon 5759 6490 . + . ID=g11169.t1.exon3;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . CDS 5759 6490 . + 0 ID=cds.g11169.t1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . exon 6650 6798 . + . ID=g11169.t1.exon4;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . CDS 6650 6798 . + 0 ID=cds.g11169.t1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . exon 7300 7595 . + . ID=g11169.t1.exon5;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . CDS 7300 7453 . + 1 ID=cds.g11169.t1;Parent=g11169.t1 NODE_243_length_29520_cov_41.8409 . three_prime_UTR 7454 7595 . + . ID=g11169.t1.utr3p1;Parent=g11169.t1 #PROT g11169.t1 g11169 MLPAIFRRCTVNDGRLLWLVFGAFAVFALSAGPSALAASADAIGLNVITNLTALTTAQVAHMSLVAGASGGDAENARAMFSRSPSCYYDPLVSKPGAMPSPGTDCALYPAAIDVIGSLGDIVGWPNIAALEYGNEPDVYARGPANATAFNYAVYLEGVRWYADMLDIYAQSSANTNLSPPLRIRPRMLSGPTLAGCSPSGAVAGGVPSLANFNQNFETFVSDTRSFLNDVRCHRYLLSPTLASVKSLLAESNFDGYLSVQVFDVAVAARYGLYYINGEMGDTFSGGVAGVSNTFASALWLLDTLLQSLLVGVRGARLHVSDDIYTPFSFASSAGPRLVAAKFYALLAFGYSVGRNSVLLRYSNSTSTGADVRVTAGSLTKNYAVKSYHAQHRTLRVRNNNVTSTDGVVWAGVTYDGNTDGTPIRVGAEFETVNCSRVGGQDALTVSVTTGSASDITIPFVGVLRSAAPGCAPPGVDESSAAGASRPPTRTGTSTTTPTADARQSGAPSAATTTATASNAIAKTLGTTGRASSISSGSRSQAVPTTFSIPMSSGSSDGGAVSVTATAKALTSFGSTRAVATSISQGTMRASSVRKSVTASIGVIHVTATAADSPSNSKPLITAPTLAPTVFDASLEARPQGDRRESGGSSTQTARIAAGAAVGGLAVVACAAAAVVLLMRKSRWFRIIRGDKHLNLGVELQCSYGVPGSLRMVNIENGASRVMEEFTPPDHWL* # ORIGINAL: g11173.t1 original gene structure, not modified by PASA NODE_243_length_29520_cov_41.8409 AUGUSTUS gene 20160 21816 . + . ID=g11173;Name=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS mRNA 20160 21816 . + . ID=g11173.t1;Parent=g11173;Name=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 20160 20267 . + . ID=g11173.t1.exon1;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 20160 20267 . + 0 ID=cds.g11173.t1;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 20493 20652 . + . ID=g11173.t1.exon2;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 20493 20652 . + 0 ID=cds.g11173.t1;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 20802 20901 . + . ID=g11173.t1.exon3;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 20802 20901 . + 2 ID=cds.g11173.t1;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 21292 21412 . + . ID=g11173.t1.exon4;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 21292 21412 . + 1 ID=cds.g11173.t1;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 21682 21816 . + . ID=g11173.t1.exon5;Parent=g11173.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 21682 21816 . + 0 ID=cds.g11173.t1;Parent=g11173.t1 #PROT g11173.t1 g11173 MDACFNHTAAEAEFLAEDTLVTIVPSFRLDSIKFIAGEYGPFIPARPTEVPLWLAVTLKSRQMCRIIVPDWLSKGNLQSAVCCFAWQGSQKLEQSRENEKREVGRFCSMPDHYMEVAAVLLESASDEVANSDEVRGLLQDIWDLRYAKIRRGLRDLQDSSAVKLNNLSLMEINAVRPFFVQVMNQFNAISKHEGVLDGASQSQSQRY* # PASA_UPDATE: g11174.t1, single gene model update, valid-1, status:[pasa:asmbl_4316,status:12],[pasa:asmbl_4319,status:12], valid-1 NODE_243_length_29520_cov_41.8409 . gene 22384 27436 . - . ID=g11174;Name=g11174.t1 NODE_243_length_29520_cov_41.8409 . mRNA 22384 27436 . - . ID=g11174.t1;Parent=g11174;Name=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 26224 27436 . - . ID=g11174.t1.exon1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 26224 27436 . - 0 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 25742 25924 . - . ID=g11174.t1.exon2;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 25742 25924 . - 2 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 24693 25525 . - . ID=g11174.t1.exon3;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 24693 25525 . - 2 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 24397 24447 . - . ID=g11174.t1.exon4;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 24397 24447 . - 0 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 23634 24102 . - . ID=g11174.t1.exon5;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 23634 24102 . - 0 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . exon 22384 23340 . - . ID=g11174.t1.exon6;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . CDS 22613 23340 . - 2 ID=cds.g11174.t1;Parent=g11174.t1 NODE_243_length_29520_cov_41.8409 . three_prime_UTR 22384 22612 . - . ID=g11174.t1.utr3p1;Parent=g11174.t1 #PROT g11174.t1 g11174 MRLNVSFIDDRDPFAAGDATGRTTFVFDDDKPLRDQLEEVKVLLRAPQKAEDATLQIGIDGPYLDPDESISNQPGDVKIRTSATYRSLPGVQAKRAAEIISTEKGRQLKTAVTQLASRLESDAHFAQEFSLAGGLAIVARECALADQLTQAYAIRALRAGATYVDGMDKISTQKPIILQIFRWSLSEMSRVSKGAIELLLVIVSCKPASASVIIEMGNHVGKERGDVAFAGWVAALNSGDSGLQIAAMTLINKIAFSLDDEDAFYDFTDSLELSGIKGKMRSGADGMWPADAGADLVVQFEHYEQQLKDADENKAAPAGASLRLSVREDGKNTRRRIGGGRRKSADPSSAPANLTLISSPSGSSLGAPSSPSLMAPSGDAASDMSDVSDVEGDAKPNVSNQNALAEQQLKAHLARMEAQVEVAQRAATIPILRRGSSAEVDQAQEKLDSALKERDRTRSLLQKMESLVDGDGAAPKAETVDAVVHVGTAPASKPQPTTTPATRAPAPAPVAPTSAPTPAPAPAPAPPVAEADDAPRVSVRKRIIIDEEDEDNFSGGSSLVVPPPEETTKLRVAGFDFGDLLSISLQEKAPAAPAAGGPPPPPPMGGAPPPPPPMGGAPPPPPPPMGGPPGPPPPPGGPTLQAVVLPTAGPEVVPLKPLHWNKIAANKLCGQTIFGKAKAFASLPTAVKLADLESHFAKEDLTARKQAASGAAGGKKKELLTVLDAKRSNQIQIAMRKLPPIAKVSESVLTMNDHELNREQVRLLTSLFPTDEEVTQITDAVAKNPGAQLDPADALLHALLSIRGARARLQCWLTAMDFAEMEAASAHSLMSLKQALSELKTSRSLEELFGIVLAIGNRLNAGTAKGAADAFGLDAFVRLSSVRSAKGITVLEFIAQTLCDLHPDGTALAEELAHVGAASQVDLDQIESEVSSFVARIEECGESLKTIAMLDSRSVYRARLPGFIQSATSRVDAIKSIIQRLRIQAKECGLYFGLSQADASKMAQQPKEFMGTFTALVMDLVPLVQKTLSMREKEAAKSNRRKTLGLVLSLDSTEAPHKPTASASTASASHSASGMTTSASAPATPASAAAAAAVPVIGTTAPEMSQRKVQVAVDEEDEASDMMASLVSSLVKTKDRGKKSRQRSAFGFRQSIRQTLKL* # ORIGINAL: g11170.t1 original gene structure, not modified by PASA NODE_243_length_29520_cov_41.8409 AUGUSTUS gene 8309 10940 . + . ID=g11170;Name=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS mRNA 8309 10940 . + . ID=g11170.t1;Parent=g11170;Name=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 8309 8449 . + . ID=g11170.t1.exon1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 8309 8449 . + 0 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 8672 8846 . + . ID=g11170.t1.exon2;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 8672 8846 . + 0 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 8999 9105 . + . ID=g11170.t1.exon3;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 8999 9105 . + 2 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 9403 9580 . + . ID=g11170.t1.exon4;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 9403 9580 . + 0 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 9918 10060 . + . ID=g11170.t1.exon5;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 9918 10060 . + 2 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 10259 10400 . + . ID=g11170.t1.exon6;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 10259 10400 . + 0 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 10539 10625 . + . ID=g11170.t1.exon7;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 10539 10625 . + 2 ID=cds.g11170.t1;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 10870 10940 . + . ID=g11170.t1.exon8;Parent=g11170.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 10870 10940 . + 2 ID=cds.g11170.t1;Parent=g11170.t1 #PROT g11170.t1 g11170 MSVTSDYADREQRERALYGSVSQGVDIAHVLGPEAQDNSMVVTWAGKTHTFRSLSQIARLFVIVALLGSCAVLALTIQRMATIHFPLTEDTRADFTYAVVLLFNTLFSVYYAVHGCVKERKIEILAYIIASGIVTLYIFYQFLFPRDDPAYDSSTERPVLIARFALCCVFEPLNIVLAFMVSREFGWLEFETVGAHPALCALLKFDLQLGVTLVFMSAFSGIVVDAELAINIAGLVLTLAWALLGYVSARREVRRSMLVFLALAAVQPAYDIFVVVRVLKESPDDNFATYPVVIAGVTAIVLRAALIFFAYQTMRNFNRGLKELLYPAKTQIRRSSSDDPERRNLLR* # ORIGINAL: g11171.t1 original gene structure, not modified by PASA NODE_243_length_29520_cov_41.8409 AUGUSTUS gene 11230 16659 . - . ID=g11171;Name=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS mRNA 11230 16659 . - . ID=g11171.t1;Parent=g11171;Name=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 16219 16659 . - . ID=g11171.t1.exon1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 16219 16659 . - 0 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 15619 16098 . - . ID=g11171.t1.exon2;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 15619 16098 . - 0 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 14277 15286 . - . ID=g11171.t1.exon3;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 14277 15286 . - 0 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 14008 14094 . - . ID=g11171.t1.exon4;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 14008 14094 . - 1 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 13704 13795 . - . ID=g11171.t1.exon5;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 13704 13795 . - 1 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 13004 13542 . - . ID=g11171.t1.exon6;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 13004 13542 . - 2 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 12747 12839 . - . ID=g11171.t1.exon7;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 12747 12839 . - 0 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 12146 12423 . - . ID=g11171.t1.exon8;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 12146 12423 . - 0 ID=cds.g11171.t1;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS exon 11230 11866 . - . ID=g11171.t1.exon9;Parent=g11171.t1 NODE_243_length_29520_cov_41.8409 AUGUSTUS CDS 11230 11866 . - 1 ID=cds.g11171.t1;Parent=g11171.t1 #PROT g11171.t1 g11171 MPRPKRKQNVVIDWTPAEAGAIENVDAINVHNGCNEQESNMKEPSRRRQRPRGVEADVTYEATVDAMPVKRLKKVSGVDDTIDSSLGDQRFPTHLENAATVDSCATAAVETCAPLSEPLARLVRLYKALDSTCSLIKPRGVVCTFDQVAPSVQSMAGCSLEMIDIQRMITVSPSTISLKWVHVPETDSAGACTAFNGEYLLEIVLKHIRAGGYFGQPKAVTPKQVERRCRQFERAAVELCGCASSDFDLNAAVGGAADRDNIAIPPAEIPPYPLDEASDDICLLAAMQAEAEHAMAVAESYAPEPVQSVEAFLERLQQSKLYRGQIVHIERVPARTARYGEVSASCALARPVVAALDAVGIKQLFCHQARAIEGFLSGKNVVVATPTSSGKSLAFVAPILDAIMRDPSTVAVLLFPTKALAQDQLRSLRRYVEADATLSALVFPATYDGDCGDAERLRVRETANVILTNPDMLHASILPQHARWPRFFERLKIVVLDEAHAYSGVFGSHVGCVLRRLLRLCHECYGSRPRFVACSATIGNPTEHFRRLIGPQPPGLPGEPGGDVLEIGPGDDGSPSGVKHFVLWNPPLLSEAAVKAARAKAAKLSGQYQHIETAVTTRLSPIMEAARLMSHMIAHGFRTICFCRYRKVCELTLERTHTCLTDIGRQELCPLVMSYRGGYTAEDRRRIERDLFSDRLLGVVATTALELGVDIGSLDASIQVGFPGSAASLWQQAGRAGRGEKDSLSVVVCYDGPLDQYFVRNPRYMFQMVPEQASIDPENAHVLWFHLLCAACEMPLCAATSNKSNSVRGGGAGALYLGDNVRFGNDAFERVVAAMCAGVQAGGSRNPGGAALEKRGNSWYQTYLHGRPTQEGCLRSIDNESYKVIDESKGRVLDEIDRFKAFFAVYDGAIYSHQGDRYIVRKLSLSERVAYVRPCSVSYYTSTRDHTDVTTLRVIAGRRWGAAAAHYSKATVCTSVWGYRRICERSGDVLDTIELSLPPMDYDTYAAWIDISAATKRAVESSPLGLNFKAGVHGAAHAVVALLPLFLMCDPHDVGCECINPFEQRGRPLRILVYDRHAGGTGLSQQAYPFFADLVRMALELIEGCPCGGLGGLESGRSVLASAPMLASAPHLPTTITGAVDDTANAVSGVAAEGNTVLRNSGDSAGASSGVDVARDPLDDKGGCIACVFHGNCTEYNAVVDKRAAVLVLRHTLAEMSL* # PASA_UPDATE: g11175.t1, single gene model update, valid-1, status:[pasa:asmbl_4320,status:12], valid-1 NODE_243_length_29520_cov_41.8409 . gene 28138 29520 . - . ID=g11175;Name=g11175.t1 NODE_243_length_29520_cov_41.8409 . mRNA 28138 29520 . - . ID=g11175.t1;Parent=g11175;Name=g11175.t1 NODE_243_length_29520_cov_41.8409 . five_prime_UTR 29519 29520 . - . ID=g11175.t1.utr5p1;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . exon 29228 29520 . - . ID=g11175.t1.exon1;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . CDS 29228 29518 . - 0 ID=cds.g11175.t1;Parent=g11175.t1;5_prime_partial=true NODE_243_length_29520_cov_41.8409 . exon 28852 28985 . - . ID=g11175.t1.exon2;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . CDS 28852 28985 . - 0 ID=cds.g11175.t1;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . exon 28555 28604 . - . ID=g11175.t1.exon3;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . CDS 28555 28604 . - 1 ID=cds.g11175.t1;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . exon 28138 28361 . - . ID=g11175.t1.exon4;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . CDS 28285 28361 . - 2 ID=cds.g11175.t1;Parent=g11175.t1 NODE_243_length_29520_cov_41.8409 . three_prime_UTR 28138 28284 . - . ID=g11175.t1.utr3p1;Parent=g11175.t1 #PROT g11175.t1 g11175 SPPHPHPRPRANLSGTPTTQCDAVVQAYGPQIVQDIVNKLSPSTICTQIKACPGSGCVVCELAVTTLDGLIGSNRTVQNVEAKLEGLCDLLPSPDGESVLDCSKLSTLPSVTFVLGGKEFTLTPSQYVLEITEAGQSECVSGFIGLDVPPPLGPVWILGDVFMSAYYTVFDYGNVRVGFAESK* # ORIGINAL: g3109.t1 original gene structure, not modified by PASA NODE_12857_length_265_cov_91.8053_potentialcontaminant AUGUSTUS gene 2 265 . + . ID=g3109;Name=g3109.t1 NODE_12857_length_265_cov_91.8053_potentialcontaminant AUGUSTUS mRNA 2 265 . + . ID=g3109.t1;Parent=g3109;Name=g3109.t1 NODE_12857_length_265_cov_91.8053_potentialcontaminant AUGUSTUS exon 2 265 . + . ID=g3109.t1.exon1;Parent=g3109.t1 NODE_12857_length_265_cov_91.8053_potentialcontaminant AUGUSTUS CDS 2 265 . + 0 ID=cds.g3109.t1;Parent=g3109.t1 #PROT g3109.t1 g3109 EVLVHLVKVGRFTLTDIGHLRASCKRLCDFFDRIRDTVVNDNVVGDLSQYRPYGHWDIDLAAQCGHLEVIKLLHEDEVKRGRATHCSN # PASA_UPDATE: g13034.t1, single gene model update, valid-1, status:[pasa:asmbl_2064,status:12],[pasa:asmbl_2065,status:12], valid-1 NODE_1592_length_10315_cov_38.5262 . gene 2 3862 . + . ID=g13034;Name=g13034.t1 NODE_1592_length_10315_cov_38.5262 . mRNA 2 3862 . + . ID=g13034.t1;Parent=g13034;Name=g13034.t1 NODE_1592_length_10315_cov_38.5262 . five_prime_UTR 2 2 . + . ID=g13034.t1.utr5p1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 2 75 . + . ID=g13034.t1.exon1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 3 75 . + 0 ID=cds.g13034.t1;Parent=g13034.t1;5_prime_partial=true NODE_1592_length_10315_cov_38.5262 . exon 286 417 . + . ID=g13034.t1.exon2;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 286 417 . + 2 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 655 1094 . + . ID=g13034.t1.exon3;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 655 1094 . + 2 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 1335 1442 . + . ID=g13034.t1.exon4;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 1335 1442 . + 0 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 1767 1849 . + . ID=g13034.t1.exon5;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 1767 1849 . + 0 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 2005 2065 . + . ID=g13034.t1.exon6;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 2005 2065 . + 1 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 2306 2361 . + . ID=g13034.t1.exon7;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 2306 2361 . + 0 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 2707 2822 . + . ID=g13034.t1.exon8;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 2707 2822 . + 1 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 3021 3137 . + . ID=g13034.t1.exon9;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 3021 3137 . + 2 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 3290 3384 . + . ID=g13034.t1.exon10;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 3290 3384 . + 2 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . exon 3595 3862 . + . ID=g13034.t1.exon11;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . CDS 3595 3723 . + 0 ID=cds.g13034.t1;Parent=g13034.t1 NODE_1592_length_10315_cov_38.5262 . three_prime_UTR 3724 3862 . + . ID=g13034.t1.utr3p1;Parent=g13034.t1 #PROT g13034.t1 g13034 PPSSFFAGGAPAFDGWAAEVASYQDDAQQIIDHVTSGKGQGIAYDRLSVFVDTFGPRLSGTPALEAAIDNALAQLQADGFDNVHGEEVMVPHWERGFESLRLLEPRVDSLSLLGLGRSIATPPEGITAEVLVVSSFDDLTARAAEAKGKIVVFNAEFVSYGVTVAYRVGGAVAAGKVGAVAALVRTVAPFSINSPHTGTQSYQDGVPQVPVACITIEDAQMFARMQERGQRIVVELKMEARTFPDAKSRNVVADITGSEHPEQIVLFSGHMDSWDVGQGAMDDGGGAFISWASLLAIKQLGLRPKRTIRLVMWTAEEFGGVGGDSFYDTHKGNTSNYNIVMESDLGVFRPQGIEFTGNDAARAIMANVGKLLAPINATEVTTDGEGTDISLFMQAGVPGASLANDNQDYFFYHHSDGDMMTVLNRSDMDLCTATWAVTAYTLASLDDMLPRDTPAVRPSAPYKPHYGMH* # ORIGINAL: g13035.t1 original gene structure, not modified by PASA NODE_1592_length_10315_cov_38.5262 AUGUSTUS gene 3975 8584 . - . ID=g13035;Name=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS mRNA 3975 8584 . - . ID=g13035.t1;Parent=g13035;Name=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 8441 8584 . - . ID=g13035.t1.exon1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 8441 8584 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 6709 8313 . - . ID=g13035.t1.exon2;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 6709 8313 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 6418 6567 . - . ID=g13035.t1.exon3;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 6418 6567 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 6116 6262 . - . ID=g13035.t1.exon4;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 6116 6262 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 4926 5945 . - . ID=g13035.t1.exon5;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 4926 5945 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 4603 4719 . - . ID=g13035.t1.exon6;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 4603 4719 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 4187 4376 . - . ID=g13035.t1.exon7;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 4187 4376 . - 0 ID=cds.g13035.t1;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS exon 3975 3985 . - . ID=g13035.t1.exon8;Parent=g13035.t1 NODE_1592_length_10315_cov_38.5262 AUGUSTUS CDS 3975 3985 . - 2 ID=cds.g13035.t1;Parent=g13035.t1 #PROT g13035.t1 g13035 MAALGFKTLERQTGELPDEQHKKLKELFRPHIESFNFMINNGLATAVADIEPREAKDANGRIARFWIEEATIGLPMLSDKEQRSLQRRIFPSECRERAVTYKSKLQVVVKCQVGDATEVQTWTKAIGQVPVMVKSERCNLHGLSPKELVYRHEEAEEQGGYFIVNGIERIIRMLVLPRRNYVMAIERSSYKKRGPTYTRFGTTIRCVRPDMTSLTITVHSLVDGNCMLRFSHKKNEYLVPVVLILKALVDTTDREIYERIVQGAVSDSFVTDRVELMLRESAHLGIYSQHDALVFLGSRFRAALDVPAHYKDADVGKLLMRKIVFVHLSSDRDKFNLLVFMVQKLYRLVSGEIAGDNPDSPMNWEILQGGHLYLMYLKDKLEDWLDGIRTVIATDLRRQADRVSFASQDYFAKALSRNTVDVGRRLEYLMATGNLVTSSGLDLQQVSGYTIVADKLNFLRYVSHFRCIHRGAFFAEMKTTSVRKLLPESWGFICPVHTPDGAPCGLLNHLSYSCELVNDIEDASALPRVLVQLGVAPAETGAAYPPSYLPVVVDGRMTGAVAPEKARQVADALRYFKAKGIEGVPRFLEVGYVPPSSGGLYPGLFLFTTPSRMMRPVQNLAAGSVEMIGTFEQVFMDISCSDDEIRPNVTTHHELRPTNFLSFVANLTPFSDFNQSPRNMYQCQMGKQTMGTPLHSFVHRTDNKLYRLQTPQTPMVRPRSYDDYEIDNYPTGANAVVAVISYTGYDMEDAMILNKGSFDRGFGHATVYKTQIADLTKTRGPRGEKPTQRFGVPAAEKAPQGIEADGFPAIGTKLEPGDPLYCVVDETSGQHRIEKYKGTEPAYIDEVRLLGSESGDAEAQRAIIKLRTTRNPVIGDKFASRHGQKGVCSQMWPSESMPFTEGGMVPDIVFNPHGFPSRMTIGMIIEMMANKGAAMHGICHDATPFQFSEDNVAGEFFGEQLVQAGFNYYGTERLYSGIHGTEFQADIFFGVCYYQRLRHMVGDKFQVRTTGPVHNLTHQPIKGRKRAGGIRFGEMERDSLLAHGVSFMLQDRLMNCSDYSTCYVCRGCGSLLSPMLEKPSAISKRRGVSCRVCKSGKGIEVVAVPYVFRYLVAELTAMNIRLTLDIK* # PASA_UPDATE: g8169.t1, single gene model update, valid-1, status:[pasa:asmbl_7513,status:3], valid-1 NODE_466_length_23209_cov_40.3362 . gene 1436 4000 . - . ID=g8169;Name=g8169.t1 NODE_466_length_23209_cov_40.3362 . mRNA 1436 4000 . - . ID=g8169.t1;Parent=g8169;Name=g8169.t1 NODE_466_length_23209_cov_40.3362 . five_prime_UTR 3779 4000 . - . ID=g8169.t1.utr5p1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . exon 3687 4000 . - . ID=g8169.t1.exon1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . CDS 3687 3778 . - 0 ID=cds.g8169.t1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . exon 3254 3341 . - . ID=g8169.t1.exon2;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . CDS 3254 3341 . - 1 ID=cds.g8169.t1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . exon 2909 3021 . - . ID=g8169.t1.exon3;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . CDS 2909 3021 . - 0 ID=cds.g8169.t1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . exon 2316 2408 . - . ID=g8169.t1.exon4;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . CDS 2316 2408 . - 1 ID=cds.g8169.t1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . exon 1436 1979 . - . ID=g8169.t1.exon5;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . CDS 1439 1979 . - 1 ID=cds.g8169.t1;Parent=g8169.t1 NODE_466_length_23209_cov_40.3362 . three_prime_UTR 1436 1438 . - . ID=g8169.t1.utr3p1;Parent=g8169.t1 #PROT g8169.t1 g8169 MSGVDGALTGLLSRARDLQSAIGAFELARPWPDTLDRFGIVSTQINSLCEQLKKVDDLHERIIVPLNTSSTSDPELNVATQGRMGALKPELVPHVLLRSKYTPELEKLALQMQTDAASHIATLRTKRKYTEMGDDELVADVVVEHNEKCERASLFIAELRDGQAEDFRAAAAAQGVGMSSAAARAAARRSARVSEAEQSTHALALAVVRGVDKSGKIQEQQQRNLMRQQQQQQQQQQQQQQQQQQQQQQQQQQLQEQQQQQNQEQQPLVEPQDVRMKEEAPEDGKQHESASAAMQPPLSSHGVSPQDP* # PASA_UPDATE: g8170.t1, single gene model update, valid-1, status:[pasa:asmbl_7514,status:12], valid-1 NODE_466_length_23209_cov_40.3362 . gene 4523 14741 . + . ID=g8170;Name=g8170.t1 NODE_466_length_23209_cov_40.3362 . mRNA 4523 14741 . + . ID=g8170.t1;Parent=g8170;Name=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 4523 10995 . + . ID=g8170.t1.exon1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 4523 10995 . + 0 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 11227 11365 . + . ID=g8170.t1.exon2;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 11227 11365 . + 1 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 11972 12094 . + . ID=g8170.t1.exon3;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 11972 12094 . + 0 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 12351 12524 . + . ID=g8170.t1.exon4;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 12351 12524 . + 0 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 12691 12774 . + . ID=g8170.t1.exon5;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 12691 12774 . + 0 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 13039 13127 . + . ID=g8170.t1.exon6;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 13039 13127 . + 0 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 13297 13371 . + . ID=g8170.t1.exon7;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 13297 13371 . + 1 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . exon 13573 14741 . + . ID=g8170.t1.exon8;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . CDS 13573 14527 . + 1 ID=cds.g8170.t1;Parent=g8170.t1 NODE_466_length_23209_cov_40.3362 . three_prime_UTR 14528 14741 . + . ID=g8170.t1.utr3p1;Parent=g8170.t1 #PROT g8170.t1 g8170 MSVSACSRRFSPFIVVVILSLAYIPHLVSSFRPHDDPSDGAGGAHVTGPDPRAVGASSQSLQTSESHQSPLERHARATQTPTAVTVTLKKDDYLLDVIAAAVNRTANATSIALTIRGATGVTSVGLASPALIALYGDDCVPFSSSSLVKTVTFDGKAVTVNFAAGACVRIPGRIQIAVKNASFSGAGVTDGGNGQYAVSVSPGTNFTCDSCRFYDHPFGAIECTDGNVTLASCVFRGNDNDYQGADILARGASLVRVSKCTFMGRSRGVVSIPVRQLQPLARDAESDAVSADGGTFVTPEDGPPSWSLSSIPGVGRCDGKGTSSEGRTAGGCIALRDTSSGFVADCAFDGDIDYRVAWCDGGAIGVLDRASVVVRNVSAVSTLAVDYGGFISVRHNASAVVIGLTAQYSSSGTRYNPGFGGIVHVAEGASMSIQQSSMYDSAATQGGVAYVSDMAVFNMSGCTVDATTARPVGLGTTEALGAFLFMSDSASANMEASRIANAWAKSGSGGFVHIEAYADWNFMERAHTRLTVHNCTVLNAVALYGALINVAPASMRLSGSSTFFDDVDLSGRAVTLSIFDSLIVSTVTMLSAAIRLESMFARLLLDVRLDNSNHPDAVRSSMAARMPTNALVIERTTFKNVSSGRLGGLLFMDGTARVTVRNCTLSTVTVDVQFTDNIQYVSPGKARGGVAYLLHAASLAVTDTVIAATRAADGGGLVAIAAPCGASAHFLSCTVTNTSSAADGGAVHIDRSVFPSSTQRLGDNGGAEAAVTLEGSHVSASTSGGRGGLAYVAANLGRVLVINTTVLKSEAVASGGVVHTSAYTENAFVTDGAVFGTCVAGDAGGFLYAEAANLTHVTRAAIRIKRTKLGSVRAASGGLFFLTRTAIAIVENVTIEKSSANTLAGLAVLTGRSELRASNLTVVDASCTLGSGGVAVRGNSSIDLDIDSVSFGTCSSAPGLACVSASTNSNPCNGTGTSGSLLCANIAPPLPDASWGSPQAVEWRCRIAAYNPISAEAGIDAYVSGFESGAEQPASCTHVLPSAPDTVAHVGRAGGLMAAVDAVGEYGEVVAVFVTQPPSTEYELDGVLVLPSVHIFSPDSEQATVLPATGHETTAGVVVSSLSHVVLEGLKFQSFRGDALKVEAGAHVTIMGCLFTENAGRSLVVEGHVMLSSSSFTGNTATAVTVVGGGVVECDACSFQRNVNIDANGGAVYASGLSLVRLLNTALVERCFAFAGMGGFVYATGSAVVEMTGYVPGVSRSAGVGAAYGGFVAAEGASADGPHVEISEISDIDVPYASIGGACFYAKGAAAITVSGPLAISNAYGVTGGVALLDGGSSMTMDRVYVTNVNADRGGFLGVMTGFSIGDNGRFYVRLQSIGVSRTASRFEGGAMYVSGLGQLSVAGCQFYDTYSAFSDGGVLAARAPYNDDSVILPEAYLWSLVPDPWSDVDDVLERIVMPVTGPLSIDFTDCVVMEARAGGSGGVFFFSHNVHALLFNIAIRTVRAEQSGGALAFTGLRVHLVLDSIDVVTATAKADGGVFYFGGASAESPTDTNRVVVSNLYVDACGASSGGMMYAAATTTVNISDFRLSSTAATVDGGAILIEEQAYVTLTRMNVSDSSAHFQGGVICARGQSSVSLSNCTATHVTAGEAGYGGFAAVTGGASLEVDGLHVTGASAAYGGSFYASDCAAVHGERMMVSESSVGGDGGMGYVSGGAGIILDNIAFRNTAAGGSGGVATVSDKGVLVVRRGNIKNARAGLGGSFYGDADSLVTLSHLDVEESYSTMHGGFAYVSGSSSLHMTSLRGHHFAAGWVDAEQHSVSASAAAVDNKYAAGGFIGVAFNSPNIMCRSPRGRCTDEWSPLGSSDALISDAVADPCGRLVIRGVRLADCVAPRGPIAFAWMQAKLAGDGLRVADIQVLPSINMSVTAQFGEDVKRGASQNDVLGSLFVSPPARLVFADTQAETGAGARQSRQTIAVKSGHRLGPITVSVYDAYGKQYSVPSTETLVIRLSSSPDAVVGAGITANLTNAAASAPITWLGGDLVKTFIDASNVTFSDLRAYSVGIGTFNFSFVRGKGSYEGAEWDDLFGSALLTVRVDPCSGDEQLDANTECVAAPLSASSSGTSSGLVAAAVVPVILVSVAFVVTCRWWYQRLRKAKSKATHKEFLKHVMSKKEHLLALEIPAETVELLDVIGSGEFGLVHKAQVFSDGRLRLCAVKIMRNNASVDERSSFLQEAEIMIGLSHPNVVSLINISTQAEPMMILLELVPHGNLRRFVQRVTAVHRGTHSSISLLVGLCAQVARGMAYLSASGIIHRDLAARNVLIGQDAWGEMVAKVSDFGLSREGSDYYRRVGRKAKLPVKWMSPEAISKRLWSEKSDVYAFGITLWEVFTYGDTPFAELSNGEAYRRIQTGYRMDPPRHCPPDVALLMASCWQLEPEQRPRLVEMSAQLDAFFLEMQMANADIVDRMVLSHNSGGGDAIFAETDSGIPRMAAVSGYANVEGVELLEVSSGAASLSVRASGGTHRLSVSASGGAHRLSVSASGGAHRLSVGGGGHRGYLTLRRGDNTSGSKELSPSQARSLTSLASVTAAGGGPHEPHVTVAGNEVRVTSPAITDDDRCGASAGRSPSAPLRDLSLNATLLDSQLHFEAEMQSQAHHLAAQSPSAGATRFTGAGSGVDQAQGVAHVNGMPSYEVGIEPNGYIDA* # PASA_UPDATE: g8168.t1, single gene model update, valid-1, status:[pasa:asmbl_7512,status:12], valid-1 NODE_466_length_23209_cov_40.3362 . gene 213 1162 . - . ID=g8168;Name=g8168.t1 NODE_466_length_23209_cov_40.3362 . mRNA 213 1162 . - . ID=g8168.t1;Parent=g8168;Name=g8168.t1 NODE_466_length_23209_cov_40.3362 . five_prime_UTR 1063 1162 . - . ID=g8168.t1.utr5p1;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . exon 999 1162 . - . ID=g8168.t1.exon1;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . CDS 999 1062 . - 0 ID=cds.g8168.t1;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . exon 631 716 . - . ID=g8168.t1.exon2;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . CDS 631 716 . - 2 ID=cds.g8168.t1;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . exon 213 377 . - . ID=g8168.t1.exon3;Parent=g8168.t1 NODE_466_length_23209_cov_40.3362 . CDS 213 377 . - 0 ID=cds.g8168.t1;Parent=g8168.t1;3_prime_partial=true #PROT g8168.t1 g8168 MGILEKISDIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEAPKGARGAGEGFDVMKSGDARVALIGFPSVGKSTLLSKLTKTRSEAASYEFTTLTCIPGVIE # ORIGINAL: g8172.t1 original gene structure, not modified by PASA NODE_466_length_23209_cov_40.3362 AUGUSTUS gene 16637 22191 . - . ID=g8172;Name=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS mRNA 16637 22191 . - . ID=g8172.t1;Parent=g8172;Name=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 20991 22191 . - . ID=g8172.t1.exon1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 20991 22191 . - 0 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 20596 20744 . - . ID=g8172.t1.exon2;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 20596 20744 . - 2 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 18556 20406 . - . ID=g8172.t1.exon3;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 18556 20406 . - 0 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 18004 18076 . - . ID=g8172.t1.exon4;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 18004 18076 . - 0 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 17641 17783 . - . ID=g8172.t1.exon5;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 17641 17783 . - 2 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 17278 17395 . - . ID=g8172.t1.exon6;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 17278 17395 . - 0 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 17023 17108 . - . ID=g8172.t1.exon7;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 17023 17108 . - 2 ID=cds.g8172.t1;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 16637 16828 . - . ID=g8172.t1.exon8;Parent=g8172.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 16637 16828 . - 0 ID=cds.g8172.t1;Parent=g8172.t1 #PROT g8172.t1 g8172 MCSDDSTENSVRALYSLLLRQQGDVGPARVAGFGRTELASVVRTTLGCDLSEDGVSELMEHLDRDGDGIVSLDDFRMVMGEYLNDSPHGMGARSRDSPSASSTGWTRRTPLVVDRDEEVFASPSPGTSPELVSPLGFDSRARSSHRQTPYSRDGQSWRGTPAGGKGRTMLGLNPEIESEELEMLSRAYEAKLATLRSQVSHLETANIRLEGELARLESTSQAVISKERRAVESLRRANESLGTQLESLAESERSAGQRAAQLASENRRLVEQVGHLRRIYEVDRALSRTSSATGSATIAYRYASLRSMSSYTRRLSDELPESGVAVTAAVTTTPDDLRIRTSTSTPVEAESGLQLASGSFGAFSPSLRRLNMSPFALSPTTDTALAAEVIRLAEERAALQATVREALDALHESQDEVHRLHGLIEEQSATAHISHIHSDSLLDSSMLSVADANVPTLKGSIMSEIEDIVKSRISMDGSSDDTQLTTDQLADSRRSLGAVSEEGCVDDVVTHASTHSAIDVVSEDQSGLSHVHADTSGNTTDGHVTRGDAPVLEFARAISRATHDSSVQTDDVGDYVSGAALALERDAILAEVAEIASERQQLEARLVAVANETESSMRLLEELASARQDVWRAKERVATDRDAVDQDKDAVRIERETVRAEREQLLKERAQIDAEREEVAVERARMARALTRAESHFKDINPERQRPVGAENVSSGDGIRKAVASDASFVRTPGGDAGEPADTSLVRVPTFTSSSAALASGGSGVAGASGAAAESTTNARASPLPIVDAGTYLSRELSQRLALHARKAEEVLVIAPSSSRTSESVGVVRDVSVPGLLLCASVSGSSAWLVISRSGSGGDSGGGGGNSEASTSAGVRCVGDGGGGGGGGGGGGEGEGEGNDVCGVDCDEDSVGCLFEWASHKSTPSQSHVIDRVGSHGKIGGRTEDKRDEAQRDEASRDSAPVKLRRRSSALLALAGSDAVIVSSTSSLRTVPSPAPPPSVLPSSDSGVDVYASFEDKPWPFREGVDEGMMESRGIFTRAMRMVGGIFFGMLGVALKLDELGEPVAAKQTESLKCEIESLRRAKVAERSANEENMTKMLELQDALIRGVISEKVSIAVAAGEYAAALAKATDDARRLKKEVLLLRANDDPLVAAKAVIGSDLSLKRFKTLPLAGFLLKKGEFLRLPNWNRRFFVLVDQFLLYYTGNKDDEQPRAAVCLVQAMAGHIADSSISRANVFRVDTPHISLILSADSASNADVWVRGIDHAVSREL* # ORIGINAL: g8171.t1 original gene structure, not modified by PASA NODE_466_length_23209_cov_40.3362 AUGUSTUS gene 14955 15768 . + . ID=g8171;Name=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS mRNA 14955 15768 . + . ID=g8171.t1;Parent=g8171;Name=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 14955 15014 . + . ID=g8171.t1.exon1;Parent=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 14955 15014 . + 0 ID=cds.g8171.t1;Parent=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 15360 15446 . + . ID=g8171.t1.exon2;Parent=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 15360 15446 . + 0 ID=cds.g8171.t1;Parent=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS exon 15691 15768 . + . ID=g8171.t1.exon3;Parent=g8171.t1 NODE_466_length_23209_cov_40.3362 AUGUSTUS CDS 15691 15768 . + 0 ID=cds.g8171.t1;Parent=g8171.t1 #PROT g8171.t1 g8171 MDPSTFSDATASPQKPMEFKEILPQTGILFSEKTTFSEVLCKPKLMPIKSLTLEKMEELQRKAIDSVRKNELGH* # ORIGINAL: g8565.t1 original gene structure, not modified by PASA NODE_1332_length_12039_cov_40.4826 AUGUSTUS gene 3609 10003 . + . ID=g8565;Name=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS mRNA 3609 10003 . + . ID=g8565.t1;Parent=g8565;Name=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 3609 7035 . + . ID=g8565.t1.exon1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 3609 7035 . + 0 ID=cds.g8565.t1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 7352 7488 . + . ID=g8565.t1.exon2;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 7352 7488 . + 2 ID=cds.g8565.t1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 7980 8206 . + . ID=g8565.t1.exon3;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 7980 8206 . + 0 ID=cds.g8565.t1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 8523 8566 . + . ID=g8565.t1.exon4;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 8523 8566 . + 1 ID=cds.g8565.t1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 9012 9157 . + . ID=g8565.t1.exon5;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 9012 9157 . + 2 ID=cds.g8565.t1;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 9371 10003 . + . ID=g8565.t1.exon6;Parent=g8565.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 9371 10003 . + 0 ID=cds.g8565.t1;Parent=g8565.t1 #PROT g8565.t1 g8565 MLPSEVASSVIDQSQRVLVISIAANVSIHWSDPGLEQNVTISARNSIAGYDTILVNGNLASIECGAVEPTTVVVASGSLLISAVGISKCTAADAYVAGAASFGSLFVVSAGTTVNLTSISFANLSGVRLATAYGHVNFYKVQVADALFGIGERSCVLGDDCGGGLVRVAGNGTSSLVDMHVENVGCIGACGGGVVVAKGYATVHVDALTVLSAQALDGAVAHVAEWAHVTVSQSSFVSASSRRHGGVIAVFNDAMCTISACEATLSSSHERGGVLYGMHRAVLHSSKLTAVSIMAGTGGVFNLFNRARLVAVDTVATDVQSQSDGGFLWMNSDTQLVLAGVAITGCSSGAYGGAFMIYDNAVADITDCNATNVGGEVSGGFVYSTNSVRISMRGANLASITSGSGGAFVLYQSATVGLWHVTAADIAVTDFGGFASVVEDSHLTVTGLHVTGVQSPAGGVFTVLDSATLVLSDCECAHVTTQTASFLYAEAMAFVVADSVRLTDMSASSTAGSIALLGSSAMVLSNVVVVGSIATDNGGFAIIQNDAVLNVTGCYISGASSSSGGVLSMSDAAVLYGIDVHVTGASASDFGGFLSAQSTAYASLVGLYIDNCTSDDSGGVLSMFGSSRVDIVGAAISTVRAFEIGGFAFVRNKASLVTEGLELVNSRSGYGGVVGVIGSAHVTMRSGSIWGALAGERGGCVWVRNQGHVTVAGLLINNTQSLDSGGAFSVTFEAQLYVESTVIVASVAGSFGGVWFLDDRGLCVMRDVRVEGATANFGGVMYGLGGSTLTMTNVTVADGRARASGGCLCMIGRSHVTLDGCVFASCLAATVPSTGGAGGVAFVEHNATLSVVSTTTVINASAVLGPAFYTESRLSAESQQHVTLAGTLASSFGDNDDALAGWSPGGLFASSPSQLVAFSSTSGLPITELSSPSGENVGFDLYLADFYGSYTSINGRRPLSIRLQLASSSLDGGNGSDSASGAVLEGDVERTFGAPPSVQFRSLRVFGVKGTYTITAASPNPFLYGRLDDSQAGTHLLQNFSLGVTIVDCPPGTSLTTGPRPQCAENSKGTNVAAIAAPLAVVGGLLLVALGIALVRWRHADIRLKQSKATHAEFLQRHLEQHSALAEMEIDRTDVELLDKIGEGEFGVVMRARVLVDERPRLCAAKMMKEGATFEERCDFMREANVMKGLHHPHVVSLSGIVAIDEPMLILLEYVPHGSLLSFVRSIPPRKRAGGSPSVRMLEMFCRHIVAGMAYLSHMRIVHRDLAARNVMVGQDAFGEYLCKIADFGLAGETRNKDYYRKDAAKKEKLPIKWMAPEAIQFRKSDQASDVWSFGVTAWEAFSFGEVPYATMTGASVLSYLRSGGRLERPSACAPDFYEAVVMPCFADIPGNRPTFDALYASAFPELTGARRGQHMSVDAIALAAAVDDDVNLLAVSQQWALQSMREVRDRNEVNASGARMLGVGAFDDAQGMDNDAFNLKASIGHAKDTVTSPSLGASGYLSLDAACGDEGAGPSTHESDAPLALNTYYHELEIEV* # PASA_UPDATE: g8566.t1, single gene model update, valid-1, status:[pasa:asmbl_1231,status:12], valid-1 NODE_1332_length_12039_cov_40.4826 . gene 10504 11604 . - . ID=g8566;Name=g8566.t1 NODE_1332_length_12039_cov_40.4826 . mRNA 10504 11604 . - . ID=g8566.t1;Parent=g8566;Name=g8566.t1 NODE_1332_length_12039_cov_40.4826 . five_prime_UTR 11569 11604 . - . ID=g8566.t1.utr5p1;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . exon 11512 11604 . - . ID=g8566.t1.exon1;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . CDS 11512 11568 . - 0 ID=cds.g8566.t1;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . exon 10995 11087 . - . ID=g8566.t1.exon2;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . CDS 10995 11087 . - 0 ID=cds.g8566.t1;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . exon 10504 10853 . - . ID=g8566.t1.exon3;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . CDS 10722 10853 . - 0 ID=cds.g8566.t1;Parent=g8566.t1 NODE_1332_length_12039_cov_40.4826 . three_prime_UTR 10504 10721 . - . ID=g8566.t1.utr3p1;Parent=g8566.t1 #PROT g8566.t1 g8566 MLVGVSAREGILRIDAKTNEISDKYALKFVHHYSCTPEAFKLYYGETAEEVMVVQTSEGDAISRLLEGYAHLIIKETANDRSRTGSAASSAST* # ORIGINAL: g8564.t1 original gene structure, not modified by PASA NODE_1332_length_12039_cov_40.4826 AUGUSTUS gene 671 2454 . - . ID=g8564;Name=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS mRNA 671 2454 . - . ID=g8564.t1;Parent=g8564;Name=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 2317 2454 . - . ID=g8564.t1.exon1;Parent=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 2317 2454 . - 0 ID=cds.g8564.t1;Parent=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 1691 1780 . - . ID=g8564.t1.exon2;Parent=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 1691 1780 . - 0 ID=cds.g8564.t1;Parent=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS exon 671 1306 . - . ID=g8564.t1.exon3;Parent=g8564.t1 NODE_1332_length_12039_cov_40.4826 AUGUSTUS CDS 671 1306 . - 0 ID=cds.g8564.t1;Parent=g8564.t1 #PROT g8564.t1 g8564 MGLRIVSLVLVLAAVVSAADAQVPNVKLRYMLRSVNSDKTFTYKGQIAILNLAFQKKVTVTYNANGWKDVPASYVQGDLWNNREPWNFEFTSAVAPAELYIKYTANGADYYDPLNGGKYAVGASRIALLVDSPIALIGETCDMYERKSIVRAAVRPTGGSASLRYSADGWRTRTDVVGSVSVPAAINDNVDGAIYAFTVASPSDFALRFQFSDNSEAFDNNFGRDYKTTCVFPADPCAGTCDTNAVCAGNSTTRTYQCIVGGLQDVTAFAHHVCMLVGGVHGYGALF* # PASA_UPDATE: g6528.t1, single gene model update, valid-1, status:[pasa:asmbl_3944,status:12],[pasa:asmbl_3945,status:12], valid-1 NODE_2287_length_6856_cov_51.9704 . gene 1519 3088 . - . ID=g6528;Name=g6528.t1 NODE_2287_length_6856_cov_51.9704 . mRNA 1519 3088 . - . ID=g6528.t1;Parent=g6528;Name=g6528.t1 NODE_2287_length_6856_cov_51.9704 . five_prime_UTR 2886 3088 . - . ID=g6528.t1.utr5p1;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . five_prime_UTR 2696 2722 . - . ID=g6528.t1.utr5p2;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . exon 2886 3088 . - . ID=g6528.t1.exon1;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . exon 2659 2722 . - . ID=g6528.t1.exon2;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . CDS 2659 2695 . - 0 ID=cds.g6528.t1;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . exon 1519 2205 . - . ID=g6528.t1.exon3;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . CDS 1823 2205 . - 2 ID=cds.g6528.t1;Parent=g6528.t1 NODE_2287_length_6856_cov_51.9704 . three_prime_UTR 1519 1822 . - . ID=g6528.t1.utr3p1;Parent=g6528.t1 #PROT g6528.t1 g6528 MLRSAKTAAHCDGLIIDSFGELRNIQNEVTMEMETKCIVCGASRDALDAVPHGFERHTQDEHNLWNYLFFIMHLKYKPETEYTGQESYVHDMLIRRCMDFFPIGRGDSSDAPGNSENTAVDLEKAVAAVIGKMQQTSKG* # PASA_UPDATE: g6527.t1, single gene model update, valid-1, status:[pasa:asmbl_3943,status:12], valid-1 NODE_2287_length_6856_cov_51.9704 . gene 164 1493 . + . ID=g6527;Name=g6527.t1 NODE_2287_length_6856_cov_51.9704 . mRNA 164 1493 . + . ID=g6527.t1;Parent=g6527;Name=g6527.t1 NODE_2287_length_6856_cov_51.9704 . five_prime_UTR 164 164 . + . ID=g6527.t1.utr5p1;Parent=g6527.t1 NODE_2287_length_6856_cov_51.9704 . exon 164 1493 . + . ID=g6527.t1.exon1;Parent=g6527.t1 NODE_2287_length_6856_cov_51.9704 . CDS 165 1037 . + 0 ID=cds.g6527.t1;Parent=g6527.t1;5_prime_partial=true NODE_2287_length_6856_cov_51.9704 . three_prime_UTR 1038 1493 . + . ID=g6527.t1.utr3p1;Parent=g6527.t1 #PROT g6527.t1 g6527 PPSIMLLTPNGRFETGKKICLSVSAHHPEYWQPSWSIRTVLLAIISFMPTKGNGAIGALDYSTEERKRLAVKSPAWVCSACGTCNKDVLVNAPTDPAAIGATLSKDDADAIAQISFKGAPDEGAGASKAPASGGNALPANAPSASTAPATATPATATRATAAPPAPSHAEKGKGRAIDATTTAGASGGEKVEAASQLDARLAPTHSPTQASTRSGANAARMASSSSSSSSPRPSSGVPPVRTCTAAVTPPSRSHSMAINIATLVVAALFAWLVLRKYQKTLLQAEPRSEL* # ORIGINAL: g6529.t1 original gene structure, not modified by PASA NODE_2287_length_6856_cov_51.9704 AUGUSTUS gene 3543 4846 . + . ID=g6529;Name=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS mRNA 3543 4846 . + . ID=g6529.t1;Parent=g6529;Name=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS exon 3543 3611 . + . ID=g6529.t1.exon1;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS CDS 3543 3611 . + 0 ID=cds.g6529.t1;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS exon 3765 3936 . + . ID=g6529.t1.exon2;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS CDS 3765 3936 . + 0 ID=cds.g6529.t1;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS exon 4067 4125 . + . ID=g6529.t1.exon3;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS CDS 4067 4125 . + 2 ID=cds.g6529.t1;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS exon 4239 4357 . + . ID=g6529.t1.exon4;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS CDS 4239 4357 . + 0 ID=cds.g6529.t1;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS exon 4540 4846 . + . ID=g6529.t1.exon5;Parent=g6529.t1 NODE_2287_length_6856_cov_51.9704 AUGUSTUS CDS 4540 4846 . + 1 ID=cds.g6529.t1;Parent=g6529.t1 #PROT g6529.t1 g6529 MAPFFTADRHAGTVQFEGSTLVMPAVSIGNAGQLAIDVLVCTAKPNRVGYLFDGNVLPIVGADAYNETGVAAGNLSTAVEVFQSPNGKFTIVQQRSPIAKGCTPRFLDSLFAWLKECKFEKVVLVTGSDAAHRVDSELSGPPLRYILTDAAVAASDSALRLMGWIPLEPPSAISAAADPSAPKIRLPRAGISRKFVERCNESGVCALVLVVFCNEGDNIPDGMLLASCANQVLGMVTTNGV* # PASA_UPDATE: g3717.t1, single gene model update, valid-1, status:[pasa:asmbl_1322,status:12], valid-1 NODE_135_length_36370_cov_44.6999 . gene 49 545 . + . ID=g3717;Name=g3717.t1 NODE_135_length_36370_cov_44.6999 . mRNA 49 545 . + . ID=g3717.t1;Parent=g3717;Name=g3717.t1 NODE_135_length_36370_cov_44.6999 . exon 49 545 . + . ID=g3717.t1.exon1;Parent=g3717.t1 NODE_135_length_36370_cov_44.6999 . CDS 49 354 . + 0 ID=cds.g3717.t1;Parent=g3717.t1;5_prime_partial=true NODE_135_length_36370_cov_44.6999 . three_prime_UTR 355 545 . + . ID=g3717.t1.utr3p1;Parent=g3717.t1 #PROT g3717.t1 g3717 SRHSCSQDKQRDCQHVGSRNPRGRAGHCLLRGAREHCARLIDGQAAQAHSDGGGGLRLPHGACLHRAAEEGYAGHVRQALWRAGCKHAQVGYGGAGREYFT* # ORIGINAL: g3719.t1 original gene structure, not modified by PASA NODE_135_length_36370_cov_44.6999 AUGUSTUS gene 4408 5726 . - . ID=g3719;Name=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS mRNA 4408 5726 . - . ID=g3719.t1;Parent=g3719;Name=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 5302 5726 . - . ID=g3719.t1.exon1;Parent=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 5302 5726 . - 0 ID=cds.g3719.t1;Parent=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 5050 5162 . - . ID=g3719.t1.exon2;Parent=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 5050 5162 . - 1 ID=cds.g3719.t1;Parent=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 4408 4847 . - . ID=g3719.t1.exon3;Parent=g3719.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 4408 4847 . - 2 ID=cds.g3719.t1;Parent=g3719.t1 #PROT g3719.t1 g3719 MARLRITVVRHGESVGNVAGLLQGITDGDLTQHGISQARRLGDRLARSGWSFDAAYCSDLTRAHKTAMVALGRMVGDDAESRISDVVGKGTPSAHGRVVLHVDRRLRERDYGSLENLKYPRNDRSFWQSRRGGESSVDVRKRASLLVQSLLARHLPVCCGVHDTIGHPFIADTERTHGGDAATTHGRPKEVSRSVLIVSHGDFIANILNALAVHTGVDPSSPEATKRMFTVNTAVHVVEIECTNGLFVRRVILENCSSHLDGLKRIAHDERGQRKISSFFSTTAASLSTSGGASDEANDHSGAVGDEQTEQKQAKRPRVDADSPN* # ORIGINAL: g3724.t1 original gene structure, not modified by PASA NODE_135_length_36370_cov_44.6999 AUGUSTUS gene 24210 30434 . + . ID=g3724;Name=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS mRNA 24210 30434 . + . ID=g3724.t1;Parent=g3724;Name=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 24210 24302 . + . ID=g3724.t1.exon1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 24210 24302 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 24467 24569 . + . ID=g3724.t1.exon2;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 24467 24569 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 24907 25154 . + . ID=g3724.t1.exon3;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 24907 25154 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 25394 25511 . + . ID=g3724.t1.exon4;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 25394 25511 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 25778 25950 . + . ID=g3724.t1.exon5;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 25778 25950 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 26136 26376 . + . ID=g3724.t1.exon6;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 26136 26376 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 26693 27105 . + . ID=g3724.t1.exon7;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 26693 27105 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 27288 27395 . + . ID=g3724.t1.exon8;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 27288 27395 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 27580 27709 . + . ID=g3724.t1.exon9;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 27580 27709 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 27902 28251 . + . ID=g3724.t1.exon10;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 27902 28251 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 28400 28605 . + . ID=g3724.t1.exon11;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 28400 28605 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 28822 28954 . + . ID=g3724.t1.exon12;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 28822 28954 . + 1 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 29097 29229 . + . ID=g3724.t1.exon13;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 29097 29229 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 29442 29597 . + . ID=g3724.t1.exon14;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 29442 29597 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 29817 30127 . + . ID=g3724.t1.exon15;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 29817 30127 . + 2 ID=cds.g3724.t1;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 30342 30434 . + . ID=g3724.t1.exon16;Parent=g3724.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 30342 30434 . + 0 ID=cds.g3724.t1;Parent=g3724.t1 #PROT g3724.t1 g3724 MRADENASPNTRANMHCPSPKGRNRTPTKSPRKRRSHAIPQLTPERGSVSNVDDLTKLNPLTEDGGPSLVSVNPFKDVSIYCADIIAEYSKSTSPVEDLPPHPFGVAQNALLCMARASDMQRGVTMSAGCHAPKSQSLIVTGESGSGKTMCTTHLMRYIASATGTDSHGVGEVERKILDSNPILEAFGNAQTVRNANSSRFGKYIQIYFGDNGTITGATIRTYLLESTRTITHAAKERSYHIFYQLLCGTGAEVLSGLGLTESHDPLSVRAFKYLGGAAEQQLRRADGVADDFSSTVSAMGDIGMSSGRIQSITNLLAAILHLGNVDRTCDASDETSSLCHCARLLGVDARGLLQTLTHRRITARNETFFKPTTDSEFVSSRDSLAKQLYCAVFAHVVDFVNERICPRGGVPFDDGLGSFVGLLDMYGFESFEINSLEQLCINYANERLQQQFVARVLQLEQEIYASEGLSFSSVSFDSNRPCLDVIEGDAGLLAILDEECRLARSTDTKALLDRFTSSLKGKKQFSTQRGSTKDFVLSHYAGPVKYNATLFISKNTDDLIQDQKALLARSSDDFVLSMFGRPAADIEVCVTPTKAQQQFDVQTLENTPRRAGILRNLFESQASANERDASPVRGQFSRGRSDSVTRTSAQRTVVGKFKLSLSRLAEILESTTPHYVRCIKPNMSATASLWDPWLVRQQIRACGVTETVKLFAQGYPHRFTREDFVARYGILGTPAKTSQAEVIASIAQALSSDGLLRIAMGRTRVFVGERECNRLDHMRAERLCGAATSIQSAWRGHAQRRLLKKMAAAAIVIQRAFRVYRLRMTAAKRVCAATVLQSQWRMLCARRAFLYIVSLRRTLSSVLPVPYADSSSVIECNTDTDHPVNTSNAAVLECAADIGDSHSSQPEIIRDLSIAVTHTQSRDATPGLARVVNMKRGELLSFRRPHRVVRLHVRPSPLVNAECFPGMLIPQDGLAQVLSRDMGDWLKKNSQSSGFAEQCTL* # ORIGINAL: g3718.t1 original gene structure, not modified by PASA NODE_135_length_36370_cov_44.6999 AUGUSTUS gene 1293 3481 . - . ID=g3718;Name=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS mRNA 1293 3481 . - . ID=g3718.t1;Parent=g3718;Name=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 3315 3481 . - . ID=g3718.t1.exon1;Parent=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 3315 3481 . - 0 ID=cds.g3718.t1;Parent=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 2823 3214 . - . ID=g3718.t1.exon2;Parent=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 2823 3214 . - 1 ID=cds.g3718.t1;Parent=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 1293 2635 . - . ID=g3718.t1.exon3;Parent=g3718.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 1293 2635 . - 2 ID=cds.g3718.t1;Parent=g3718.t1 #PROT g3718.t1 g3718 MSDVRKFFSHFASGTQARPSSPADNKKWIADAVLCAINVACADTAGCGALSADPSTQEILCPGDDTLKSLKFDTSQWQQAFTSIAALVVRFPGATESDNPGAPWWSRTTSLLRCMQLVRFRELCTPAMLRQLSANRAFVDSLVRDLGGNDEVPVGPPTRRAAVSACVLAQLYSYGRSAISASIHMFSSSLEDSQVVGLYGNPSNFGRMINSLPPSPSDPPDDWVDFYVRKLESVLALRLKCQGMVAPCQKVNCPCFLFQASALMPIVWWRHGCLDRLGLTHTNNNTVSPILRSISFMGMTQPFVASLVCGTLNAVFDAASQSPNFERLYKASMGSHFVVQMHHFLTMCSEWTAGYTVRNCSAYLADFSRAPRAKVLSLIQSVTRLAGPNQVTTGAEGERLKMSLKDVYATFARVCRMPGSLPVTVLGNSFDETPTATFCFRHMAYALVSGDASTADNIVSIFSAVLQQRQNGCPAGYDAALNVYVCTRGADIAIARLTESGSSGGAMHAAWVSMREWLVRIRRSMRLAYEEQPARAIKPATASRVETNTATAAGKTADKSDAVGGTDETPPLRRCDYCGRQSEKMFKCGRCRVARYCNRECQVAAWGGIHRTQCPTLRDGSNAAAAASTAQEE* # ORIGINAL: g3723.t1 original gene structure, not modified by PASA NODE_135_length_36370_cov_44.6999 AUGUSTUS gene 19988 23646 . - . ID=g3723;Name=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS mRNA 19988 23646 . - . ID=g3723.t1;Parent=g3723;Name=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 23537 23646 . - . ID=g3723.t1.exon1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 23537 23646 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 23343 23418 . - . ID=g3723.t1.exon2;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 23343 23418 . - 1 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 23084 23218 . - . ID=g3723.t1.exon3;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 23084 23218 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 22767 22820 . - . ID=g3723.t1.exon4;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 22767 22820 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 22331 22441 . - . ID=g3723.t1.exon5;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 22331 22441 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 22041 22103 . - . ID=g3723.t1.exon6;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 22041 22103 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 21789 21878 . - . ID=g3723.t1.exon7;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 21789 21878 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 21223 21507 . - . ID=g3723.t1.exon8;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 21223 21507 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 20976 21064 . - . ID=g3723.t1.exon9;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 20976 21064 . - 0 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 20672 20763 . - . ID=g3723.t1.exon10;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 20672 20763 . - 1 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 20453 20549 . - . ID=g3723.t1.exon11;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 20453 20549 . - 2 ID=cds.g3723.t1;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 19988 20195 . - . ID=g3723.t1.exon12;Parent=g3723.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 19988 20195 . - 1 ID=cds.g3723.t1;Parent=g3723.t1 #PROT g3723.t1 g3723 MATVVRAVPRQPVWDGAVVPPFIRLKNNVNVVSEERRAHPGAPKQTEVYVERHENYVSNSAATLAAIESAKADAARKEKEERLRDFQRRLKMRVGYASSRISERKVRADRPVIATEETAADLARRDAAELRSRDTLTIRVPTAHEAMSSPSGKEGSEALESEVIRSANFARTALESRRGVIPPRRAFENPPIPTLKEVEEARFGASLNSWGSKLREEYLARPSADDNHNYNGNGYDESDTLAAATFKTSPPPLSQGTKRHVVFVDDDDHAQDVTSAPARVQDGGGDVHVAGADKFVSDRKRRLEEAEKVRNHVEATRKAYMQAERVRARETLRDANHRYQAQQLRAPKEKARSMQEHLLADIENGPPKAVTMNPSDAYRIAKEGEVAVRTAAAKRHSELARYVDALRLRLKEKCELAGIAVPPVCACGGSAGNAFDANRLSCASNCMYRNNPRAYAKALTAILDSIGVV* # PASA_UPDATE: g3721.t1, single gene model update, valid-1, status:[pasa:asmbl_1323,status:12], valid-1 NODE_135_length_36370_cov_44.6999 . gene 12111 15521 . + . ID=g3721;Name=g3721.t1 NODE_135_length_36370_cov_44.6999 . mRNA 12111 15521 . + . ID=g3721.t1;Parent=g3721;Name=g3721.t1 NODE_135_length_36370_cov_44.6999 . five_prime_UTR 12111 12556 . + . ID=g3721.t1.utr5p1;Parent=g3721.t1 NODE_135_length_36370_cov_44.6999 . exon 12111 14929 . + . ID=g3721.t1.exon1;Parent=g3721.t1 NODE_135_length_36370_cov_44.6999 . CDS 12557 14929 . + 0 ID=cds.g3721.t1;Parent=g3721.t1 NODE_135_length_36370_cov_44.6999 . exon 15264 15521 . + . ID=g3721.t1.exon2;Parent=g3721.t1 NODE_135_length_36370_cov_44.6999 . CDS 15264 15521 . + 0 ID=cds.g3721.t1;Parent=g3721.t1 #PROT g3721.t1 g3721 MARRGMVLVVTLLVICVHHSHQVRSADVPSAFYANYTLGSRVFINEMHITNAGQDVDEGIEIAGPAGTDITGWTVTFYSSSGTVYASSTISSPNGYAPVVLPDQQNGFGTYFFTKWLGSHDVLRTNGGVALSDATDTLVQFIGFTDGSFLTPIKPTTGPANGVPSVIISLWINSNAAVGTSIQLIGTGYKYSDFTWAYASKNTYGAVNSNQTLKFPTANGWPGCTATAIYNAIFTISSVGDMVTGACVFGYASFDEDGVFSRPVVTCRDDATYGNDASAVSHPCVRVCPADIQYNATWPLAKLGATSVGSCILGYLPDETVTPTVALRRTCNNGNFTTPTGTPCYVNTDCDARPYYKLARFPRAKTETNVTGECLPGSATLNGQTPVYRCVAGGTLTETVTNPCEPLVFFSELRVFAYTNPTGPPNDAIEVVGPAGIDLTGWQIAQYAKSAPRPLYFMTITKGSAVNSNDNVIPDQRGGFGALALKRVFCPTGALAMVDSELDVYPLVLLPPPLVDGMQYAIDAVLFNSELILFTASGIRSRRVSGFTSLTKMDGWGQKGYSIKLGGVGLTPSQLNWTMSLTAESLGLFNGEHTGFKTAGDAATLYVSQRMCAANTDLNATYPAALGGMYTSGECSIGYILPPDGYQQTRRYCNATTLQLESPNATCVKGCAATTKGNALFPPVLNGGKSIGTCLPGYASMQTPTLGCGSSGFAPNPSMNCAFVGCVGAYKGAIFGIKTDVGSVGVGTCPLGLSTGGPPPNATCGAAGFVGDVHNPCSKSEVFINEYSDVGGAYEGMEIMGPVGTNLSAWRVELYYSDVRPSHCPGTPVSGKAGTIVLGTVATTGVVIPARTSGTRLSPLFFPFKIDPDEPLAIAL* # PASA_UPDATE: g3722.t1, single gene model update, valid-1, status:[pasa:asmbl_1325,status:12], valid-1 NODE_135_length_36370_cov_44.6999 . gene 15605 19453 . + . ID=g3722;Name=g3722.t1 NODE_135_length_36370_cov_44.6999 . mRNA 15605 19453 . + . ID=g3722.t1;Parent=g3722;Name=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 15605 15710 . + . ID=g3722.t1.exon1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 15605 15710 . + 0 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 16329 16502 . + . ID=g3722.t1.exon2;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 16329 16502 . + 2 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 16704 17270 . + . ID=g3722.t1.exon3;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 16704 17270 . + 2 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 17408 17482 . + . ID=g3722.t1.exon4;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 17408 17482 . + 2 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 17801 18366 . + . ID=g3722.t1.exon5;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 17801 18366 . + 2 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . exon 18488 19453 . + . ID=g3722.t1.exon6;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . CDS 18488 19231 . + 0 ID=cds.g3722.t1;Parent=g3722.t1 NODE_135_length_36370_cov_44.6999 . three_prime_UTR 19232 19453 . + . ID=g3722.t1.utr3p1;Parent=g3722.t1 #PROT g3722.t1 g3722 MVATANSMTMPNGRSSAKTLQLQGVGRYAEDFTWEGVMWNPSGTKNTWRGTIGNPSLNSVNSNQKVISPFFLNEIAYPTATSPSVSVEIAGPPGQTLFGWTVALYNGVTGKVQASSGALPAGSNVSSQTSPSSRRSASTTATPSFQSFASDAALGLYVVTFDVPAATATLIASAIAVLDDLGRLVQFVAYSMQSNTTISEAVDGPAAGYTATFVGTFSLIEGMSLQAGGVGFEWGSFALLPPAPPSLGAPNPSQTLAYVCEGTTFSESNEIYPITPVGHIAYGYCATGYISNVSPYRSCDMLPSGYFVVEDMCQVHRNQGVMLLEAPASVRRYATPAIAVIAVFAVIFAIEVAVVPLVTRRFARVIRRQSVTSAPLDVYSMRWNLTNIIKLATIVLQIVQIHAIVLNARVSDDFVDTAGTVFSSAGASSFSASFRWYFWVIMSVTQLWLFYAVIFIVDGGTALRQSGAAGRILLFPAEQLLQIWTTAGFIPTLLNGSLEPQLDVCYRLNFFVVDPLIKVALVFLRVFFTEKPNVYLSFMIVIAAGSAVYNIKLRPCHLVWINTAVAVGYISASLTAILLLIGNASLDTHVVYGIPAVWGMATAAICVYLKWVYPSSLIAIVDPVKEKSAKARRLLMSLKGVFAKRVSTVGIADESATQVPSSMWSLHAWRQTGIAKQDFDSTGSDAVMHACVKVTTVSSMTELSDGHKAFDTAAESASVTLLAPDLDALSEWRRTGGCPCGCC* # PASA_UPDATE: g3725.t1, single gene model update, valid-1, status:[pasa:asmbl_1327,status:3], valid-1 NODE_135_length_36370_cov_44.6999 . gene 32000 36050 . + . ID=g3725;Name=g3725.t1 NODE_135_length_36370_cov_44.6999 . mRNA 32000 36050 . + . ID=g3725.t1;Parent=g3725;Name=g3725.t1 NODE_135_length_36370_cov_44.6999 . five_prime_UTR 32000 32083 . + . ID=g3725.t1.utr5p1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . five_prime_UTR 32296 32820 . + . ID=g3725.t1.utr5p2;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . exon 32000 32083 . + . ID=g3725.t1.exon1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . exon 32296 33302 . + . ID=g3725.t1.exon2;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . CDS 32821 33302 . + 0 ID=cds.g3725.t1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . exon 33641 33661 . + . ID=g3725.t1.exon3;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . CDS 33641 33661 . + 1 ID=cds.g3725.t1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . exon 33969 35536 . + . ID=g3725.t1.exon4;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . CDS 33969 35536 . + 1 ID=cds.g3725.t1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . exon 35671 36050 . + . ID=g3725.t1.exon5;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . CDS 35671 35885 . + 2 ID=cds.g3725.t1;Parent=g3725.t1 NODE_135_length_36370_cov_44.6999 . three_prime_UTR 35886 36050 . + . ID=g3725.t1.utr3p1;Parent=g3725.t1 #PROT g3725.t1 g3725 MSLLKGMLRTPFDSSSAATLSGRLFIIVLATFAALSIHKHFEESSLTVSFSPPQLDGKVDLTYVVAHITASVVIMGGVVVAFAFQVELSVYGTRSEVGGAPKDKADITAVDQSASSPRENTHTKSSNSRPSPLGDSHSVGPSSQDHRHPEARQRMASRMVGYVNHELRNPLNGVMGLVELAIGSLATCIAMAQTDHADSERETSSDIPATPSARPSTTPMDSAFSGSKIHSSTSPATWPASHIADSAVPSTVAADADNSSGGILYGQRASASLPERLSLIRADLVAIDRLCQLLKLVVDDVREIRRFEDGALVITPAPVCLRSVLGEVVAVMQPKLSEKPFVNVSVEFSDKSLEENPVICDPLRLKQVLLNLLSNAIRHSDRGTINVTVSMVDESSRDASSTPSPTFTSSDSSAASQQQSDLQALVAPSSGAGKRIRFAVTDNGYGISPDKQRLLFEPFHPDYEKVILNPGGKNSNKYAGTGLGLYLCGLLAKLMGGSINFVSTEGRGSSFWIDIPASFDESTGRSLNSPGYAPDLSSLNSLGMSPASAVKIARQSHAHRTERETDTSQHQSSALGSESSSLASASSANVKTGCASRSSEAMLVSGGPSSSSAALPSVALRPTPEVLVGTHHLVVDDDRINRTVLRRYLEGAGIASVDEAENGLEALRLATSRQYDYVWIDMKMPIMGGLEATRRIRLLDQRSASIPIIGVTGDVTESDVKICREAGMTAVMSKPISRARVFSMADSRGNHPTVSLDAIAQ* # ORIGINAL: g3720.t1 original gene structure, not modified by PASA NODE_135_length_36370_cov_44.6999 AUGUSTUS gene 6109 11096 . + . ID=g3720;Name=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS mRNA 6109 11096 . + . ID=g3720.t1;Parent=g3720;Name=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 6109 6126 . + . ID=g3720.t1.exon1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 6109 6126 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 6508 6619 . + . ID=g3720.t1.exon2;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 6508 6619 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 6859 6896 . + . ID=g3720.t1.exon3;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 6859 6896 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 7060 7111 . + . ID=g3720.t1.exon4;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 7060 7111 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 7404 7445 . + . ID=g3720.t1.exon5;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 7404 7445 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 7617 7741 . + . ID=g3720.t1.exon6;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 7617 7741 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 7997 8077 . + . ID=g3720.t1.exon7;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 7997 8077 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 8329 8359 . + . ID=g3720.t1.exon8;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 8329 8359 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 8754 8792 . + . ID=g3720.t1.exon9;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 8754 8792 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 9059 9178 . + . ID=g3720.t1.exon10;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 9059 9178 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 9565 9701 . + . ID=g3720.t1.exon11;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 9565 9701 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 9996 10068 . + . ID=g3720.t1.exon12;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 9996 10068 . + 0 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 10410 10472 . + . ID=g3720.t1.exon13;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 10410 10472 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 10716 10854 . + . ID=g3720.t1.exon14;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 10716 10854 . + 2 ID=cds.g3720.t1;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS exon 11072 11096 . + . ID=g3720.t1.exon15;Parent=g3720.t1 NODE_135_length_36370_cov_44.6999 AUGUSTUS CDS 11072 11096 . + 1 ID=cds.g3720.t1;Parent=g3720.t1 #PROT g3720.t1 g3720 MSTEGKDLKIEQIEVAPPKAGEVRIKVLATGVCHTDAYTQSGKDPEGVFPVILGHEGGGIVESIGEGVTSVKPGDHVVPLYVPQCRECKFCKSPKTNLCQKIRITQGKGLMPDGTSRFTCNGQSLFHFMGCSTFSEYTVVAEISLCKVDEKAPLDKVCLLGCGISTGYGAALNTAKVEPGTNVAVWGLGAVGLAVIMGAKEAGASRIIAIDINNSKFEKAKEFGATEFINPNELPAGKGLVEHLVEITDGGLDYTFECIGNVNIMRQALEACHKGWGQSVIIGVAASGQEIATRPFQLVTGRVWKGTAFGGWKSRDSVPNLVDKYMSGQLKINEFVTHDVPLADINHAFHLMHDGSSIRAIVHL* # ORIGINAL: g641.t1 original gene structure, not modified by PASA NODE_914_length_15912_cov_63.9695 AUGUSTUS gene 3756 6195 . + . ID=g641;Name=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS mRNA 3756 6195 . + . ID=g641.t1;Parent=g641;Name=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 3756 3856 . + . ID=g641.t1.exon1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 3756 3856 . + 0 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 3940 4637 . + . ID=g641.t1.exon2;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 3940 4637 . + 1 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 4732 4949 . + . ID=g641.t1.exon3;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 4732 4949 . + 2 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 5077 5312 . + . ID=g641.t1.exon4;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 5077 5312 . + 0 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 5419 5604 . + . ID=g641.t1.exon5;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 5419 5604 . + 1 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 5691 5824 . + . ID=g641.t1.exon6;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 5691 5824 . + 1 ID=cds.g641.t1;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 6044 6195 . + . ID=g641.t1.exon7;Parent=g641.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 6044 6195 . + 2 ID=cds.g641.t1;Parent=g641.t1 #PROT g641.t1 g641 MSPFDSNGTTTTSAHALGIAHGPTRSVERDALPSSADQPALYIQQVGDVLTFLDTDVVIHQGYLYYVRAFNSKNASSPAGECSIESLEKAELPLPPIVSSTPTLNPDNQQSMIKFTWTEDTSSGPILKTFISRDGRLILEGQTMPEYTDRNVIFGNTYLYEFISMNHIGNSTAARFNVTAYIGPNSTPTTSSSSAAGPVAGGVVGAIVGAAGIVFAILFARKQTSRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCILLRNRIGEGEFGEVYLADITYYGGRTVAVLKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSNPNCMVLEFAAHGDLRHFLSDSKVSDFTSTDLLCFCIGKKRRSHTTSYSVTATDYVLVVIADIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPFKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSVLCRTEGGVGVGGVGGVGGSNLDDANGTDNTIEQSETYALTVPEDAYAIF* # ORIGINAL: g640.t1 original gene structure, not modified by PASA NODE_914_length_15912_cov_63.9695 AUGUSTUS gene 306 2306 . + . ID=g640;Name=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS mRNA 306 2306 . + . ID=g640.t1;Parent=g640;Name=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 306 377 . + . ID=g640.t1.exon1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 306 377 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 500 571 . + . ID=g640.t1.exon2;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 500 571 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 838 909 . + . ID=g640.t1.exon3;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 838 909 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 1166 1237 . + . ID=g640.t1.exon4;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 1166 1237 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 1507 1578 . + . ID=g640.t1.exon5;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 1507 1578 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 1835 1901 . + . ID=g640.t1.exon6;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 1835 1901 . + 1 ID=cds.g640.t1;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 2190 2306 . + . ID=g640.t1.exon7;Parent=g640.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 2190 2306 . + 0 ID=cds.g640.t1;Parent=g640.t1 #PROT g640.t1 g640 YWSDLQLTSIASGGFDGVPGLLTLHLYSNQIATLPSGIFDKLTAMTWLRLDSNQIATLPSGIFDKLTLLIALTLNSNPIATLPSGIFDKLTALTYLDLSSNQIAALPSGIFDKLTALTELSLSSNLIATLPSGIFDELSKLRSALRELSDLIVRCPAAVKTERLATVSLERAHAPLAGRA* # ORIGINAL: g642.t1 original gene structure, not modified by PASA NODE_914_length_15912_cov_63.9695 AUGUSTUS gene 6232 6861 . - . ID=g642;Name=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS mRNA 6232 6861 . - . ID=g642.t1;Parent=g642;Name=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 6844 6861 . - . ID=g642.t1.exon1;Parent=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 6844 6861 . - 0 ID=cds.g642.t1;Parent=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 6557 6755 . - . ID=g642.t1.exon2;Parent=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 6557 6755 . - 0 ID=cds.g642.t1;Parent=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 6232 6290 . - . ID=g642.t1.exon3;Parent=g642.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 6232 6290 . - 2 ID=cds.g642.t1;Parent=g642.t1 #PROT g642.t1 g642 MPDTIEVNAVLHAHLRTKRLYYLWPLYNRKYIMDPAFREEVKASIPVGRIVLVAESYEHGLTAFANVHTADLRHMARELAPIERKFASWCP* # PASA_UPDATE: g644.t1, single gene model update, valid-1, status:[pasa:asmbl_9976,status:12], valid-1 NODE_914_length_15912_cov_63.9695 . gene 12648 15825 . + . ID=g644;Name=g644.t1 NODE_914_length_15912_cov_63.9695 . mRNA 12648 15825 . + . ID=g644.t1;Parent=g644;Name=g644.t1 NODE_914_length_15912_cov_63.9695 . exon 12648 13697 . + . ID=g644.t1.exon1;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . CDS 12648 13697 . + 0 ID=cds.g644.t1;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . exon 13943 14713 . + . ID=g644.t1.exon2;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . CDS 13943 14713 . + 0 ID=cds.g644.t1;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . exon 15015 15191 . + . ID=g644.t1.exon3;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . CDS 15015 15191 . + 0 ID=cds.g644.t1;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . exon 15404 15825 . + . ID=g644.t1.exon4;Parent=g644.t1 NODE_914_length_15912_cov_63.9695 . CDS 15404 15825 . + 0 ID=cds.g644.t1;Parent=g644.t1;3_prime_partial=true #PROT g644.t1 g644 MTSYRSALAARLGHGGVGLHITPPQSTSGNFWAGFESNIDLIAAAEAEMPFPSPPPLDTATAAEVRAPNILDDAAVEKLIRTVHHSRLLTVVPAKDLSPSDDDTHSSSIYRGAAEGKSPAAMRRMTEGVVVRNDVGVVGGPSRTRAPTGILSYQREARSWDAKEASLVSSVRLEARVASPRHVTPAAQEANPKTAAFEGRTSISAALEDAAVRIFAEEASLVSSVRGEDCSVHGSAGSSEAAPPNVLAVDPLLAAGHEEKPLVSAVRAKDRIVRRSRGRHAQETPPKRNGTDRPHAPRLEARVASPPHVTPAAQRALDGRLANPKTAAFEERARIRAALEDEAMRILAEEAAAALGERPVILGRDPVEARLQQAAVARDVKRMELAEKKAEEDAKLYSFRPTTHSQPPATWMPIDKRVKLVEAQRNVKVAGIRAEVEVPYPYTPTINRRSQRIADKLALDLVEAEESARAADDMERLLGEESARRSGTGSCVRLDGDFRYMDDPFYDREEALEAASRSVDGSAGGRPWEEVARDVLLAKYGAPDDSRTRKSRDRVLVPASSYADGGSAPCVAGTRNDAVTSGFKRRKVSEIAFHRRQHETASRRLAWSAAADWQAEQFSFHPHINPTSVAIDRKKSRQEQSDGLRRTDRLAEPSAGFMYSKREALARDYYAQFTFQPSIDGRSRRLASDRTADDLAEESVALPIKREIMRAAARDFEESVTCPFAPTATHPGPYSHVPSVVKEISDGTPGSAAAVLLAWKSRHDGRARASAAEEERRAMTECTFHPVTNEKPPDPVPSQAPIPGFG # ORIGINAL: g643.t1 original gene structure, not modified by PASA NODE_914_length_15912_cov_63.9695 AUGUSTUS gene 7491 11634 . + . ID=g643;Name=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS mRNA 7491 11634 . + . ID=g643.t1;Parent=g643;Name=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 7491 8196 . + . ID=g643.t1.exon1;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 7491 8196 . + 0 ID=cds.g643.t1;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 8279 10506 . + . ID=g643.t1.exon2;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 8279 10506 . + 2 ID=cds.g643.t1;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 10671 10905 . + . ID=g643.t1.exon3;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 10671 10905 . + 0 ID=cds.g643.t1;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 11164 11282 . + . ID=g643.t1.exon4;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 11164 11282 . + 2 ID=cds.g643.t1;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS exon 11416 11634 . + . ID=g643.t1.exon5;Parent=g643.t1 NODE_914_length_15912_cov_63.9695 AUGUSTUS CDS 11416 11634 . + 0 ID=cds.g643.t1;Parent=g643.t1 #PROT g643.t1 g643 MVHIGGRLSVGDYTMERRFDASLAWTLRLAADEGSPPRGIVEDFQSAEQHVTRALTQPTVCRLLASGHIYRHACVAIFGLNAVQIRTQPGSTGSVSTHVAAISVLADVGQSAIDDDGYVSPEDLAREDPLSVTGHLAVMDALMQAYATQRLLPDTVGLIVSRVAPYNAVKERPSDADAAIVLWMNKILGVVSNTAAGTGARLALPPVREVVGAVADSRPAVAIISFYDKERMPLQALRLDSNLTTSDVSYNLDLLRWYCDEAQVFFPLAIEDIALASPDLFPNILVLLVDLFLALNQVQPILPDTRVDDSVRIAPHDAVDWLDGSSSEEEEFPSEFVATLPMADESALPMADESDASPAVDIGAHSRLEDSVSGGHPDADAGGALQAHLLHQSQPDDSEDIGAHIDARDQHAEQTADHSDGSEADCPIAPEHPQPLQYACADSSEETALNESAPALHRDTADLGDVRHSKSAQSSGVDVVHHYDAAQSSGVDVVHHYDAAQSSGVEERDRVPLQRSVIGAAPIARQNREALDVRRSVASARPGSASRLGFRENDAGVVDNAGMQLSGRPPTAADKNVGSSGVGRLRTPMTVSKAASLEDLSRVRTSGASRLSSSNIGAHASRGSVILKPISLAQSQDADETIEPVRASKRAASCADIAGQISGEHPLPANRSTAVLRVSSRVDMSGGERIASAGRLASGSSNIDVGVDPSSVARLRMSVSVQRASSVGDLSRPQTSLSSSSTANMNKKKDRDSTAPPAVTASQDSDEGDGVHPPRRSSSCIDIAGEAKGERPLSSGSLRARKYRVPSPSEPDPHAPVLSREARNALRMQMGAMQRRMEDDLADAQRKWEEERQRIGRTALMQVLGRSAHDGAGTLAWLQVDDDCTDTGPSPAQVKKEVMGVTDAADAASAQARPARAEWARSAPVALATVCDGPYLSPHVQALDVHVHAAEDSQPMADGGSRKPKAVAYFVGDGDPEVPERERRRDRFVRTKCASQPPSDGMATVAAPRTPHAAATESIAGVSQPPHPPPIDTSRQRIRTMRRPDFGGAQESTPVQATASPAKSGSKSNRKLIRNAIMHVCLAGPVNEKAQKEVLRELDASTSDHFFILFRDEQGFQFRALYSYAPDSDIVHRLCGRGPASVTSGMVSQLFKYPLHSYIARSHLPLTH* # ORIGINAL: g2806.t1 original gene structure, not modified by PASA NODE_9477_length_331_cov_33.5625_potentialcontaminant AUGUSTUS gene 2 331 . + . ID=g2806;Name=g2806.t1 NODE_9477_length_331_cov_33.5625_potentialcontaminant AUGUSTUS mRNA 2 331 . + . ID=g2806.t1;Parent=g2806;Name=g2806.t1 NODE_9477_length_331_cov_33.5625_potentialcontaminant AUGUSTUS exon 2 331 . + . ID=g2806.t1.exon1;Parent=g2806.t1 NODE_9477_length_331_cov_33.5625_potentialcontaminant AUGUSTUS CDS 2 331 . + 0 ID=cds.g2806.t1;Parent=g2806.t1 #PROT g2806.t1 g2806 ERLSGSGLLAAGTEQAARAHYVLQDANVTVAGITFINCARGGVASVTGGRSSLLLDSVSVVNDALASVSAILLSGAERTSLVIRGGRFAGHSSPQWRVNASSLVEFGSFL # ORIGINAL: g2619.t1 original gene structure, not modified by PASA NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS gene 301 3887 . - . ID=g2619;Name=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS mRNA 301 3887 . - . ID=g2619.t1;Parent=g2619;Name=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS exon 2757 3887 . - . ID=g2619.t1.exon1;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS CDS 2757 3887 . - 0 ID=cds.g2619.t1;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS exon 1997 2537 . - . ID=g2619.t1.exon2;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS CDS 1997 2537 . - 0 ID=cds.g2619.t1;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS exon 700 1746 . - . ID=g2619.t1.exon3;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS CDS 700 1746 . - 2 ID=cds.g2619.t1;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS exon 301 503 . - . ID=g2619.t1.exon4;Parent=g2619.t1 NODE_3203_length_4030_cov_38.0531_potentialcontaminant AUGUSTUS CDS 301 503 . - 2 ID=cds.g2619.t1;Parent=g2619.t1 #PROT g2619.t1 g2619 MISSFDATFIAPLLGLKWTDNCRSLFVDSVFGDKIIQTTIPRMRSQLKSIVDGTNEHDQFTHDQHQKASEKASEKPLEKAPENSTVDADAGVDAVATKKERGAQDGQAATVVPVGDEAYVLARYTEFQRDIGAVVARWGLSRRVRDRDGLGGRGAPATASRDGSAHGRTHHAHPQHHRHHSNNTNNTNINGHATGAQHGHVQRPPTHFYLQRNAGRDPPPPPPPLSKEEASAPGVVVMPRDGAAAAVANVGGGAAHFGDAVATSTRHGGDRHHIPNSNWSRGAASLQTMLERFAPLMDALPVQNGEGGVDRAASDAATIMAEAIREQVTESMGDPDCPDTGVEINALVFLEAALNRARANGIPEDDPIYNALNRFVALHDVDASPCQCDVCRGMAKMSRCPCDDCAQVYADGDDTDEYDSALEGDDDYGCPPDDFDGSADDAGKFVDAEEDLSDIDADCDCPDCVSYMLSRQLGGADAGARFEGDLRGVHDSDAIFDGDADDDEFLEQFCDDDVIYDDDEGDFVDRADGGDGGMPCDCAECVAALRKARMERDADVDGGELPPPRPLSMPPNTSRKAARRTADGRTEAVPPPVHHVPTAGDAPYDDRDDVDHVPVSTKQPAAKGTKPCDCVQCIFGGANNNAPKPDAVPQSRARHDGVAKREQMRKRYILQSTTPSSAAPHAAAPVPPIPATVHDERSVDELLNFIEGSNQSGAPQLPQTDKGANGTVRAKSASVGSSSLAGSRAVPDRKESAEDAEAAALSAKAAKRARQKQRKMEEKLKSEVVGSSQQPPDKEAKETADASVSASVSASVRSDAANTNTNTSTNTNTNPAGVSGGSKGGKNVPASKTANQATKGSGSSTPDAATASPVAAAAAVAKVESSSSSATANKLAKREAKKAAKAASGGAVYGTDSALSAVPPKTDTPTAPTASSAVPTSPAVDVSSLSQRPSSFVFPVDDIPAVESENDDSDFDHE # PASA_UPDATE: g13061.t1, single gene model update, valid-1, status:[pasa:asmbl_6918,status:3], valid-1 NODE_4067_length_2248_cov_35.8836 . gene 24 2095 . - . ID=g13061;Name=g13061.t1 NODE_4067_length_2248_cov_35.8836 . mRNA 24 2095 . - . ID=g13061.t1;Parent=g13061;Name=g13061.t1 NODE_4067_length_2248_cov_35.8836 . five_prime_UTR 1601 2095 . - . ID=g13061.t1.utr5p1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . exon 925 2095 . - . ID=g13061.t1.exon1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . CDS 925 1600 . - 0 ID=cds.g13061.t1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . exon 548 681 . - . ID=g13061.t1.exon2;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . CDS 548 681 . - 2 ID=cds.g13061.t1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . exon 336 431 . - . ID=g13061.t1.exon3;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . CDS 336 431 . - 0 ID=cds.g13061.t1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . exon 24 205 . - . ID=g13061.t1.exon4;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . CDS 122 205 . - 0 ID=cds.g13061.t1;Parent=g13061.t1 NODE_4067_length_2248_cov_35.8836 . three_prime_UTR 24 121 . - . ID=g13061.t1.utr3p1;Parent=g13061.t1 #PROT g13061.t1 g13061 MTEAAQFYANRVIKDFKDTDKKQVELVRAFIETLKELQNYVKKFHTTGVAWNKNGQDAASVTVSGGAAAPAPSAGGPPPPPAGAPSAESLRASALQSSAAPAPKAGGAITDVFSALNKGENVTSGLRKVDKSEMTHKNPALRATSVVKAKEDDDKPKASAAPAAAAARKQPPRFELEGDKKWCVEYQEGNKNIVIEETNARQAVYIYKCVNSTVQIKGKVNCITMDGCKKTAVVFENAVASFETVNCQSVQVQIIGKVPTISIDKTDGIQVYLSKDMLDVEIVTAKSSEMNISVPTGKDGEFTEFPVPEQFKSTWNGTKIHTHIVEHTG* # PASA_UPDATE: g9547.t1, single gene model update, valid-1, status:[pasa:asmbl_3114,status:12], valid-1 NODE_1960_length_8344_cov_42.0411 . gene 1 648 . - . ID=g9547;Name=g9547.t1 NODE_1960_length_8344_cov_42.0411 . mRNA 1 648 . - . ID=g9547.t1;Parent=g9547;Name=g9547.t1 NODE_1960_length_8344_cov_42.0411 . five_prime_UTR 414 648 . - . ID=g9547.t1.utr5p1;Parent=g9547.t1 NODE_1960_length_8344_cov_42.0411 . exon 1 648 . - . ID=g9547.t1.exon1;Parent=g9547.t1 NODE_1960_length_8344_cov_42.0411 . CDS 1 413 . - 0 ID=cds.g9547.t1;Parent=g9547.t1;3_prime_partial=true #PROT g9547.t1 g9547 MSNRPDIPSGGGQAANGHITLHGASGLSTQAQRSSSQSWALPQASYLPGLALTSPQDLARLLNQQQQQQQLLQLQQQQQQQQQQQQQQQQQQQAQHQAQQKQQLGANGGRSTHNQQKNGSVAGHRQQNLGRASTAAI # PASA_UPDATE: g9548.t1, single gene model update, valid-1, status:[pasa:asmbl_3113,status:12], valid-1 NODE_1960_length_8344_cov_42.0411 . gene 2388 8269 . + . ID=g9548;Name=g9548.t1 NODE_1960_length_8344_cov_42.0411 . mRNA 2388 8269 . + . ID=g9548.t1;Parent=g9548;Name=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 2388 2480 . + . ID=g9548.t1.exon1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 2388 2480 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 2851 3201 . + . ID=g9548.t1.exon2;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 2851 3201 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 3347 3556 . + . ID=g9548.t1.exon3;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 3347 3556 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 3900 4162 . + . ID=g9548.t1.exon4;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 3900 4162 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 4482 4620 . + . ID=g9548.t1.exon5;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 4482 4620 . + 1 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 4995 5115 . + . ID=g9548.t1.exon6;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 4995 5115 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 5309 5461 . + . ID=g9548.t1.exon7;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 5309 5461 . + 2 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 5687 5760 . + . ID=g9548.t1.exon8;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 5687 5760 . + 2 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 5864 5968 . + . ID=g9548.t1.exon9;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 5864 5968 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 6231 6542 . + . ID=g9548.t1.exon10;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 6231 6542 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 6758 6865 . + . ID=g9548.t1.exon11;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 6758 6865 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 6974 7144 . + . ID=g9548.t1.exon12;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 6974 7144 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 7509 7867 . + . ID=g9548.t1.exon13;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 7509 7867 . + 0 ID=cds.g9548.t1;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . exon 8170 8269 . + . ID=g9548.t1.exon14;Parent=g9548.t1 NODE_1960_length_8344_cov_42.0411 . CDS 8170 8269 . + 1 ID=cds.g9548.t1;Parent=g9548.t1;3_prime_partial=true #PROT g9548.t1 g9548 MEFQPDPNALRQILEPLRMSLDSMVGAQGLKMLEKFNLNVDFNRYLAFILTRATAENEQARALAGLILKNNIKAMLDQPFNDLTRYVAQECLRAIGDSSRLVRNAIGIVLVTLTSVGLFNPHTQRAWPVIVEELLTKIKPGTDENTVAGSFYALWKICEEMPDEMANNQNVLNGVLGVCMPYLGHQNQLIRHPALSSVVSLIPMKPTGLTANMTSFISHLSTVANSEDPDGRRQVCQAFVFLLDYFAVQIFPHLQSIMEYMLHCTQSNDDAIALEACEFWITICQVPIQASEQLEAAEQLEQILPRLLPVLINRMQYTPLELLDMDNDDESVPDKAEDIRPRFAKSKKITVEHVESNELQQNAQGAGGDDDEDEEDLSDDDDENADASDWNMRKCSASALDALATCYGERILSLLLPILQEQLVSQDWLGQECGILALGAIAEGCYDGMVVHLDMIIPFLISSLTHQMPLVRSITCWTLSRYAKWIVDRSLHGSNHLQQVIGGLLDRIVDQNKKVQEAACSAFATLEDEAGTALVPFLPAIVPILAHAYSKYQRKNLLILYDATGTLADHVGEALDKPEYIELLLSALFQKWTLMKDTDEGLFPLMMCLASVALAIKDSFFKFAAPVYDRCVRLIQTNIHQAIMANKHQGIDPPNMDFIVAALDLLSGLAEGLEGQMAALFIPEKGTQRDLFALLFECMKSNERDVRQSSFALLGDLTKSCFPHVKPYMPDYIPLLTSNLHPSYVSMCNNAAWALGEISMQMGSEMEQYAMGTLVPLVRILTMHQVYKTLLENTAIAIGRLGLVCPSIVAPHLQDFIQQWCLGTRTIKDNAEKESAFRGICALISQNPMAIVK # ORIGINAL: g11117.t1 original gene structure, not modified by PASA NODE_1429_length_11400_cov_54.9275 AUGUSTUS gene 9038 9424 . - . ID=g11117;Name=g11117.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS mRNA 9038 9424 . - . ID=g11117.t1;Parent=g11117;Name=g11117.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 9038 9424 . - . ID=g11117.t1.exon1;Parent=g11117.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 9038 9424 . - 0 ID=cds.g11117.t1;Parent=g11117.t1 #PROT g11117.t1 g11117 MALGAFVALLFACEGADDALFGCDASGDDGGLDSSAVSARDAASRTPLFCLRANMGAAFSGDAIVNVVGEVGSEFVVDVDGVDVVGDAGFSRRGEGLGPGDAAPGLARSAVRLSIFLFRQAIPGVAQC* # ORIGINAL: g11118.t1 original gene structure, not modified by PASA NODE_1429_length_11400_cov_54.9275 AUGUSTUS gene 9528 11114 . + . ID=g11118;Name=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS mRNA 9528 11114 . + . ID=g11118.t1;Parent=g11118;Name=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 9528 9680 . + . ID=g11118.t1.exon1;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 9528 9680 . + 0 ID=cds.g11118.t1;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 9849 10053 . + . ID=g11118.t1.exon2;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 9849 10053 . + 0 ID=cds.g11118.t1;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 10338 10426 . + . ID=g11118.t1.exon3;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 10338 10426 . + 2 ID=cds.g11118.t1;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 10935 11114 . + . ID=g11118.t1.exon4;Parent=g11118.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 10935 11114 . + 0 ID=cds.g11118.t1;Parent=g11118.t1 #PROT g11118.t1 g11118 MLTQPSVSVESIGEADGAVADGAEVVEKVISRRGSLSSATKRVQAPPPSDKEDTNVALSIADILETFDCPMSEREIWAICRECVLALLSMESHRLANLHITPETVQLNFRGEVQFLVETEYSKSDIIYMAPEIKERGTTATAALNFDEPMHIYALGATLWSAADFGLPEEQEPILSEELEELIAVMTHDTPDDRVKAPQILEVCCSLF* # ORIGINAL: g11115.t1 original gene structure, not modified by PASA NODE_1429_length_11400_cov_54.9275 AUGUSTUS gene 3682 4769 . + . ID=g11115;Name=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS mRNA 3682 4769 . + . ID=g11115.t1;Parent=g11115;Name=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 3682 3818 . + . ID=g11115.t1.exon1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 3682 3818 . + 0 ID=cds.g11115.t1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 3926 4033 . + . ID=g11115.t1.exon2;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 3926 4033 . + 1 ID=cds.g11115.t1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 4120 4274 . + . ID=g11115.t1.exon3;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 4120 4274 . + 1 ID=cds.g11115.t1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 4400 4451 . + . ID=g11115.t1.exon4;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 4400 4451 . + 2 ID=cds.g11115.t1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 4563 4635 . + . ID=g11115.t1.exon5;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 4563 4635 . + 1 ID=cds.g11115.t1;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS exon 4746 4769 . + . ID=g11115.t1.exon6;Parent=g11115.t1 NODE_1429_length_11400_cov_54.9275 AUGUSTUS CDS 4746 4769 . + 0 ID=cds.g11115.t1;Parent=g11115.t1 #PROT g11115.t1 g11115 MVRALKFHEQKLLKKVDFIQWKSDDSLRENQILRRYHIQKREDYVKYNKLCGTIKQIAHKLIALKTDDPFRMQTTDQLLDKLFKMGVIPTKKNLSQCDKLAASAFCRRRLPVVMVRTKMAETVKEAVRLVEQGHVRVGPHTITDPAYLVTRNLEDFVTWVDTSKIRRHVLKYNDKLDDFDLL* # PASA_UPDATE: g11114.t1, single gene model update, valid-1, status:[pasa:asmbl_1561,status:3], valid-1 NODE_1429_length_11400_cov_54.9275 . gene 962 2683 . - . ID=g11114;Name=g11114.t1 NODE_1429_length_11400_cov_54.9275 . mRNA 962 2683 . - . ID=g11114.t1;Parent=g11114;Name=g11114.t1 NODE_1429_length_11400_cov_54.9275 . five_prime_UTR 2570 2683 . - . ID=g11114.t1.utr5p1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . exon 2546 2683 . - . ID=g11114.t1.exon1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . CDS 2546 2569 . - 0 ID=cds.g11114.t1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . exon 2308 2403 . - . ID=g11114.t1.exon2;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . CDS 2308 2403 . - 0 ID=cds.g11114.t1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . exon 1682 1865 . - . ID=g11114.t1.exon3;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . CDS 1682 1865 . - 0 ID=cds.g11114.t1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . exon 962 1499 . - . ID=g11114.t1.exon4;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . CDS 1360 1499 . - 2 ID=cds.g11114.t1;Parent=g11114.t1 NODE_1429_length_11400_cov_54.9275 . three_prime_UTR 962 1359 . - . ID=g11114.t1.utr3p1;Parent=g11114.t1 #PROT g11114.t1 g11114 MALKRITKELQDLGRDPPSNCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLSIHFPTDYPFKPPKVSFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHIYKTDRARYEQLAKEWTRKYSM* # PASA_UPDATE: g11116.t1, single gene model update, valid-1, status:[pasa:asmbl_1562,status:3], valid-1 NODE_1429_length_11400_cov_54.9275 . gene 5221 8240 . - . ID=g11116;Name=g11116.t1 NODE_1429_length_11400_cov_54.9275 . mRNA 5221 8240 . - . ID=g11116.t1;Parent=g11116;Name=g11116.t1 NODE_1429_length_11400_cov_54.9275 . five_prime_UTR 7622 8240 . - . ID=g11116.t1.utr5p1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . exon 7409 8240 . - . ID=g11116.t1.exon1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . CDS 7409 7621 . - 0 ID=cds.g11116.t1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . exon 7153 7275 . - . ID=g11116.t1.exon2;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . CDS 7153 7275 . - 0 ID=cds.g11116.t1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . exon 6561 7058 . - . ID=g11116.t1.exon3;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . CDS 6561 7058 . - 0 ID=cds.g11116.t1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . exon 6181 6465 . - . ID=g11116.t1.exon4;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . CDS 6181 6465 . - 0 ID=cds.g11116.t1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . exon 5221 6036 . - . ID=g11116.t1.exon5;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . CDS 5671 6036 . - 0 ID=cds.g11116.t1;Parent=g11116.t1 NODE_1429_length_11400_cov_54.9275 . three_prime_UTR 5221 5670 . - . ID=g11116.t1.utr3p1;Parent=g11116.t1 #PROT g11116.t1 g11116 MSVPPGVRPSGVGEAMDAAVPGVPAAAALPNSAAPSVFSYGSTASGLRDRRTAPLTRLSVDLINTYKHINEVYYAAKKRRQAQQQEEAQQKKERKLNNDGFDDENYDYIVRNGEVWMGRYETSNLIGKGSFGQVIKAFDRLTNEHVAIKIIKNKRPFYSQALTEIKLLEHLNRADPADENMVVRLKGHFVFRNHLCLVFEMLSYNLYDLLRNTNFQGVSLNLVRKFGHQILTCLRFLASTEINIIHCDLKPENILLRNPKRSAIKIIDFGSSCYAGERIYQYIQSRFYRSPEVLLGLPYSVSIDVWSLACILVEMHIGEPLFSGQNEQDQLLKITEVLGVPPAPMLEKSPRGKKYFWKRPEGGYRPKFPSTGQDYKIPGSRRLADIVMANGRRAEEANHTIADYALFTDLITRMLDYDPVSRITPAAALLHPFFNSPDASGAPSSATTIALPTLAPAPPPVGIAQQPSQNMSDGSLSMSAEDERRDPTSVSVAS* # ORIGINAL: g2104.t1 original gene structure, not modified by PASA NODE_3490_length_3345_cov_151.139_potentialcontaminant AUGUSTUS gene 1166 1864 . + . ID=g2104;Name=g2104.t1 NODE_3490_length_3345_cov_151.139_potentialcontaminant AUGUSTUS mRNA 1166 1864 . + . ID=g2104.t1;Parent=g2104;Name=g2104.t1 NODE_3490_length_3345_cov_151.139_potentialcontaminant AUGUSTUS exon 1166 1864 . + . ID=g2104.t1.exon1;Parent=g2104.t1 NODE_3490_length_3345_cov_151.139_potentialcontaminant AUGUSTUS CDS 1166 1864 . + 0 ID=cds.g2104.t1;Parent=g2104.t1 #PROT g2104.t1 g2104 MDKSATQTAVPMRLRCPVSRGEWAVVSVSLCLLILVARAAINASAGAAPAAYATEAESSDDFEVLKNSLLNCKELEDARKASTSLDPFLVSWSSSSHQIWRAGNFINSIGIANQMPTMPAREYPWPILLFTLHPGPDNRRFKQTVNGVTVSVMFDLVDVHRALYSLDASSSAVRTYQWARRNRIPMSVFKLSGFYVVTDNVARALIACAPIPPPHRTSLLAEIDQLISSMNL* # ORIGINAL: g2816.t1 original gene structure, not modified by PASA NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS gene 1 126 . - . ID=g2816;Name=g2816.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS mRNA 1 126 . - . ID=g2816.t1;Parent=g2816;Name=g2816.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS exon 1 126 . - . ID=g2816.t1.exon1;Parent=g2816.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS CDS 1 126 . - 0 ID=cds.g2816.t1;Parent=g2816.t1 #PROT g2816.t1 g2816 MKAILIATLLLAAGASAARPKAHQLDGYTFENYKKDFIKVYT # ORIGINAL: g2817.t1 original gene structure, not modified by PASA NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS gene 328 1373 . - . ID=g2817;Name=g2817.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS mRNA 328 1373 . - . ID=g2817.t1;Parent=g2817;Name=g2817.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS exon 328 1373 . - . ID=g2817.t1.exon1;Parent=g2817.t1 NODE_4647_length_1373_cov_53.5142_potentialcontaminant AUGUSTUS CDS 328 1373 . - 2 ID=cds.g2817.t1;Parent=g2817.t1 #PROT g2817.t1 g2817 TPIDIIEPIEKLSSVVVRKTKLISNGIFEREISEVRRHNAQPNILYKKGINHLSDWTSTELKTLRGLKRTPKTFNLPVANKWTAQAGVTVPHSLDYRTAVPSILTTVKDQGQCGSCWAHAATEGIESAYAIQTGELFVLSQQQLTSCVENTNDCGGTGGCMGATVEVAWDYTTQNGGITEEWMYSYQSFFGEVPQCNYVANRTLPIVKTSGYSVTSPRNDVDSVLQSLFVNGPLAISVDASNWNSYESGIYNGCDYANNISMDHAVQLVGYGTDAALGSDYWIVRNSWSASFGELGFIRLVRESTPKCGWDNDWKTQGGGCNNDPNTVWACGQCGILYDTVFPQVVV* # ORIGINAL: g11070.t1 original gene structure, not modified by PASA NODE_346_length_26351_cov_41.3353 AUGUSTUS gene 114 1041 . - . ID=g11070;Name=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS mRNA 114 1041 . - . ID=g11070.t1;Parent=g11070;Name=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 940 1041 . - . ID=g11070.t1.exon1;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 940 1041 . - 0 ID=cds.g11070.t1;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 663 764 . - . ID=g11070.t1.exon2;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 663 764 . - 0 ID=cds.g11070.t1;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 395 536 . - . ID=g11070.t1.exon3;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 395 536 . - 0 ID=cds.g11070.t1;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 114 224 . - . ID=g11070.t1.exon4;Parent=g11070.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 114 224 . - 2 ID=cds.g11070.t1;Parent=g11070.t1 #PROT g11070.t1 g11070 MADGEGPRAPRAPRGNDDKRVIVILERACLEAVKVGKEFQLLNCDEHMNFIRKNNRDIADLRPDITHQCLLTLLDSPLNKAGFLQVYIHTEKNTLIEINPHTRIPRTFKRFCGLMVQLLHKLSIRASNGPEKLLKVIKNPITDHLPPGCRKI # PASA_UPDATE: g11075.t1, single gene model update, valid-1, status:[pasa:asmbl_6099,status:12],[pasa:asmbl_6101,status:13], valid-1 NODE_346_length_26351_cov_41.3353 . gene 25555 26300 . - . ID=g11075;Name=g11075.t1 NODE_346_length_26351_cov_41.3353 . mRNA 25555 26300 . - . ID=g11075.t1;Parent=g11075;Name=g11075.t1 NODE_346_length_26351_cov_41.3353 . five_prime_UTR 26271 26300 . - . ID=g11075.t1.utr5p1;Parent=g11075.t1 NODE_346_length_26351_cov_41.3353 . exon 25982 26300 . - . ID=g11075.t1.exon1;Parent=g11075.t1 NODE_346_length_26351_cov_41.3353 . CDS 25982 26270 . - 0 ID=cds.g11075.t1;Parent=g11075.t1 NODE_346_length_26351_cov_41.3353 . exon 25555 25830 . - . ID=g11075.t1.exon2;Parent=g11075.t1 NODE_346_length_26351_cov_41.3353 . CDS 25811 25830 . - 2 ID=cds.g11075.t1;Parent=g11075.t1 NODE_346_length_26351_cov_41.3353 . three_prime_UTR 25555 25810 . - . ID=g11075.t1.utr3p1;Parent=g11075.t1 #PROT g11075.t1 g11075 MDLWDQIDRLHRQVDQLQQRVRDLTGGGEDLVAPNETYRAARPNRSSLVRFSESGDAASGSASESKSIKRADSDASSKPSRGSDALGVSSVALIVEASTEAL* # PASA_UPDATE: g11071.t1, single gene model update, valid-1, status:[pasa:asmbl_6102,status:3], valid-1 NODE_346_length_26351_cov_41.3353 . gene 1408 7679 . + . ID=g11071;Name=g11071.t1 NODE_346_length_26351_cov_41.3353 . mRNA 1408 7679 . + . ID=g11071.t1;Parent=g11071;Name=g11071.t1 NODE_346_length_26351_cov_41.3353 . five_prime_UTR 1408 1485 . + . ID=g11071.t1.utr5p1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 1408 1662 . + . ID=g11071.t1.exon1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 1486 1662 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 1824 1928 . + . ID=g11071.t1.exon2;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 1824 1928 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 2108 2264 . + . ID=g11071.t1.exon3;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 2108 2264 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 2644 2795 . + . ID=g11071.t1.exon4;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 2644 2795 . + 2 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 3054 3764 . + . ID=g11071.t1.exon5;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 3054 3764 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 3984 4160 . + . ID=g11071.t1.exon6;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 3984 4160 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 4407 4553 . + . ID=g11071.t1.exon7;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 4407 4553 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 4742 4903 . + . ID=g11071.t1.exon8;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 4742 4903 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 5037 5195 . + . ID=g11071.t1.exon9;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 5037 5195 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 5303 5443 . + . ID=g11071.t1.exon10;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 5303 5443 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 5664 5795 . + . ID=g11071.t1.exon11;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 5664 5795 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 6004 6122 . + . ID=g11071.t1.exon12;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 6004 6122 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 6315 6405 . + . ID=g11071.t1.exon13;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 6315 6405 . + 1 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 6561 6682 . + . ID=g11071.t1.exon14;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 6561 6682 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 6870 6987 . + . ID=g11071.t1.exon15;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 6870 6987 . + 1 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 7160 7297 . + . ID=g11071.t1.exon16;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 7160 7297 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . exon 7475 7679 . + . ID=g11071.t1.exon17;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . CDS 7475 7603 . + 0 ID=cds.g11071.t1;Parent=g11071.t1 NODE_346_length_26351_cov_41.3353 . three_prime_UTR 7604 7679 . + . ID=g11071.t1.utr3p1;Parent=g11071.t1 #PROT g11071.t1 g11071 MLFDQYNYQDDPPPPVNVSRGFVPEDVVVVNPNLATPYAAKKEPPIFELKTVQYKPPAQLVGMVVSNNIICLGLESNRIVRLDLDNPKDLDEVEIPRKGADDKIHKMFLDPTGRHLIVGMESGDNFYLHLSYRKFKALSKMKGIIIESIAWNRVGRVEVLSTKEILIGTSKGLIYESEIEPIDAGFFEKREEKYFKQVYAGAADQSQPITGLRFEMFPTSGAGERKYLVIAATLTRIYQFIGSVPADAQSPIFTHVFECSDGMPSFHELPGEPRTPELHLYSRFGGLPSAFGWATGPGIYTGNLVFGSQMAGESAMTDIRLVPYPADDGASYEAPLSFLLTEFHFLFLYEDRFDAVSILNDKRVLRQSLNARQGRVRRMVSDPVRGTMWVYSESGVFEIVSRQEDRHVWKMYLDKRKYDMALQYCQDNPDNRDIVLTAQADNLFESGNFMSSAVAYAQTKRPFEDVTLKFIEKDERDALMSYLLKKLETLKLSEKAQIVMVATWLVEMYLNKLNVFKEEGKSPARSQLQLEFRRFLGDPKVKDNLNRQTTYDLIASHGRVDDMLFYATLIDDHERVINHFIQSGEYRVALRTLSKQNDEELYYKFSPILMLHAPQETVNAWMSEARLQPSRLIPALVRYDQHNAAADGGANNHAVRYLEYCVTVAENKDAAIHNYLLSLYAKMKDDSRLLSFLNKQLESGIIFDLKYALRLCKEEGKLRACVHIYSAMGLFEEAVDLAIKVDVDLAKINADRPEDDDALRKKLWLQIARHVVEEERDIKKAMAFVNSCDLLKIEDILPFFPDFTTIDHFKDAICASLDDYNKHIDNLKKEMDEATQSAKAIRSDIQELRNKFGVVENTDSCSICGFSLLSRPFYMFPCHHIIHADCLVREVSYSLSSVQKQRVVDLYARVATSAAAPGNASGDDMSQVVTPMDRIRNELDDIIAAECALCGEHMVRSVDRPFIQANETDTVARSWSLS* # ORIGINAL: g11072.t1 original gene structure, not modified by PASA NODE_346_length_26351_cov_41.3353 AUGUSTUS gene 8927 14266 . + . ID=g11072;Name=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS mRNA 8927 14266 . + . ID=g11072.t1;Parent=g11072;Name=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 8927 11032 . + . ID=g11072.t1.exon1;Parent=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 8927 11032 . + 0 ID=cds.g11072.t1;Parent=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 11187 12556 . + . ID=g11072.t1.exon2;Parent=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 11187 12556 . + 0 ID=cds.g11072.t1;Parent=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 12730 14266 . + . ID=g11072.t1.exon3;Parent=g11072.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 12730 14266 . + 1 ID=cds.g11072.t1;Parent=g11072.t1 #PROT g11072.t1 g11072 MSSIGGGGSQLTADAIVDGQDEDNDLDAEEERSALERALLHAKTGLFGVLFIMAKETTQSALVVIIEIIIDFLQVLSFILANSFAWNSAWMGWLSTATRISRFHWYLEISPTTTQAIFFIALAAVLLVLLNAAYVGVTFSRGKRLNLLLVKTLRSTAGILVTVLFLPLIDIFASRFAVCDVGQLHIYSSECVWQGPEIIVKIVAIIAIILLTTLSLAVEATFFDESPESKGILSRPHARIDVAYLLYKALISILDSVLDLDQAKQQWALVAVLAGGSFLFSYLYTWYPAYYRFGYSKLRATALWCLAWASAALVCVQISYDSDSNAGPVLFYVGLPLAALAGSLAISERRRHILEKDIFRITSPYEIELKVRFMLEPLVNKRRRIMAGLDQSDADATIDGDCADGKLIAQAGEVYRKALRTIGGNSLLHVFQSQFFYATSHNGVLGARALAKASRSAPFSIDEQFFVYRRQQMCQEYFSSNASESRDVIMYMTLMQSIQTVRRVEGKCLGAQSAFWNELLSTRPDSTRLRGISSVINENIALGQKSFRTLLRMSPDSPQVCRMYANWVGSVMFDQDKKVRYLNKAAMLESGHEETAENEGSGGGGALTMFSGVSRLDLDGLRDGSRAVLRLLCDEERLGTIETVNASAMRLFGCVRHDLIGRDFTVILSEPFVRAYQSAAQAYVLEGSLEIRGSKNVFFKNKGGFLFPGRLTVKDIPGQGVLPSFVAIVEPVVTSARDHFALVNDDGFIVGCTANCLALYPELRVEDMLDYKMHISALIPGYDATMAQQMATTAGAKLSIASDAQADTGDYSACSVWESKLSTCDSEVRVVRILTSDESTDQRGTPYDRIYHSFPKKEQNGSLYNSFDGSRIRATAEQFGRPSPNHCERPSMGLSGMPTELPMERTSSVRFNATGRGSLKRCGVSITVPEGGTEEHEMEPIARAVIHHPPTDATIAIVLDEIEIPHAMPDGDEDAELSKQSIPPLERCPKPTNKPDVAYDVRDDNLGYRMQVRQQQEDADVSRPLGCGDRRKSEGHLGDGHSSASGRSNSSVKRVNALRRILVETNNKGLSPVLRTFRMVVLFTLAALVAMAIAQYVVEKQEIQTVRASFDELTTVGDIRFNAISAGLFARFLSLANTGLKPKSQIDLFRNRLAATLEGLDSGYKSIMARVPQMSTRNRALYQTLSLNITTAFDLATLKLIARETTLAEALKTDISQIRQLLNTNTTGLSISESIYLLPLINGLDSSQFSSAMNSSSTFTCQQVDTSIDEMGRKSLAICVSGLVVALVLSVFVILPTILYVERTSENTLRVFEEVPRDTIRKMRHRCNKKVKELQEDNNSGSESDSESGEGDGPEESGRATYRSGRRRLSTAPKEMAQRTMVFTRSWKYVAKMALKISAYLVLGVVFFSLTYYVGYVSIERDLREGAVRANYATYIRTSARSVLWSTLDTSAGLTPASVLASIFNTAKYELSEISRGLEIGSAVFEIPPQRALSGSHNSLLYDNACQVLDVAVANATILSDCERIGNGIFEDGLSQAVVWYLSRISQLYDVPGVNFTGADTFNFLNRVDVVEIERLEHEYLQPALQQSVEEYTARITSLISTRNSSFLALLLTFIILSVFVYVVIYNRLIHSLDVEMKRTRSMMLMLPDDILGQMTWLDAYMSELAGRHV* # ORIGINAL: g11074.t1 original gene structure, not modified by PASA NODE_346_length_26351_cov_41.3353 AUGUSTUS gene 23486 24802 . + . ID=g11074;Name=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS mRNA 23486 24802 . + . ID=g11074.t1;Parent=g11074;Name=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 23486 24010 . + . ID=g11074.t1.exon1;Parent=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 23486 24010 . + 0 ID=cds.g11074.t1;Parent=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 24316 24443 . + . ID=g11074.t1.exon2;Parent=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 24316 24443 . + 0 ID=cds.g11074.t1;Parent=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS exon 24592 24802 . + . ID=g11074.t1.exon3;Parent=g11074.t1 NODE_346_length_26351_cov_41.3353 AUGUSTUS CDS 24592 24802 . + 1 ID=cds.g11074.t1;Parent=g11074.t1 #PROT g11074.t1 g11074 MQSVSLAHLKSKPEGHPVCKTDQPHKCEELHQVSPSAAVQNSATSKRARDAVCVKVEPNLSGASVDGACALFQPKRRRNDTPSCVPQIKQESEFKKEADDQSSANEARGSGDGAAVAVLSLAFVSVLKHQGSTIVRYYRRFCQDDAELLSEMRSQIDWQTRSVRIIGKWIPQPRQAVCDAINAAMGTTFNSCLLNEYRNGSQYIGFHADDEKDLGENRMVATVSLGGARDFVLKPKKSEGEKTTKILLESGSLVVMAGECQRLYHHSIPKRASAEYRVSLTFRRLNT* # PASA_UPDATE: g11073.t1, single gene model update, valid-1, status:[pasa:asmbl_6100,status:12], valid-1 NODE_346_length_26351_cov_41.3353 . gene 14889 22018 . - . ID=g11073;Name=g11073.t1 NODE_346_length_26351_cov_41.3353 . mRNA 14889 22018 . - . ID=g11073.t1;Parent=g11073;Name=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 21989 22018 . - . ID=g11073.t1.exon1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 21989 22018 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 21557 21832 . - . ID=g11073.t1.exon2;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 21557 21832 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 21301 21361 . - . ID=g11073.t1.exon3;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 21301 21361 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 20903 20970 . - . ID=g11073.t1.exon4;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 20903 20970 . - 2 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 20483 20623 . - . ID=g11073.t1.exon5;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 20483 20623 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 19982 20316 . - . ID=g11073.t1.exon6;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 19982 20316 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 19345 19858 . - . ID=g11073.t1.exon7;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 19345 19858 . - 1 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 19125 19202 . - . ID=g11073.t1.exon8;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 19125 19202 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 18787 18932 . - . ID=g11073.t1.exon9;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 18787 18932 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 18407 18606 . - . ID=g11073.t1.exon10;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 18407 18606 . - 1 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 17732 18219 . - . ID=g11073.t1.exon11;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 17732 18219 . - 2 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 17295 17410 . - . ID=g11073.t1.exon12;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 17295 17410 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 16708 16903 . - . ID=g11073.t1.exon13;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 16708 16903 . - 1 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 16393 16524 . - . ID=g11073.t1.exon14;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 16393 16524 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 15888 15995 . - . ID=g11073.t1.exon15;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 15888 15995 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 15565 15672 . - . ID=g11073.t1.exon16;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 15565 15672 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . exon 14889 15238 . - . ID=g11073.t1.exon17;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . CDS 15041 15238 . - 0 ID=cds.g11073.t1;Parent=g11073.t1 NODE_346_length_26351_cov_41.3353 . three_prime_UTR 14889 15040 . - . ID=g11073.t1.utr3p1;Parent=g11073.t1 #PROT g11073.t1 g11073 MDSSAGTARPTARRDALLAIERDVQQKWAAAHAFESDAAPEGRKADDEKYFVTFPYPYMNGRLHLGHTFSLTKCEFAVGYNLLKGKRCLFPFAFHCTGMPIKACADKLKREIEDYGFPPVFPPPEEKAEEPETKERADPTKPAKKVHSKVAAKTGGQQYQWRIMQSLGLKDDEIKNFADANYWLQYFPPMAQEDLRRMGLKADWRRSFITTPVNPFYDSFVRWQFSKLKELGYIKFGERPTIYSAKDGQPCMDHDRQTGEGVAPQEYTLIKLRVVDPVPAALSGPAFEGKSVFLVAGTLRPETMYGQTNCWVRPDMTYGAYQINDKDVFVCTRRAARNLAFQKLSPKYGEVVELATFKGEAILGAALSPPRSVYATVYALPMLTIKEDKGTGVVTSVPSDAPDDYAALRDLIQKPPLREKYGIRDEMVLPFQPVPIIEVPGFGNLCAVKACDDLKIRSQNDRDLLDEAKDMVYLKGFTEGVMLVGEHKGKRVQDAKPIIRKEMIDEGLAVRYFEPEKQVMSRSGDECIVADCDQWYLDYGNEDWKKKVALALDQLETFNDDTMNNFRKTLDWLHEWACSRSYGLGSRVPWDEKYLIESLSDSTIYMAYYTIAHLLQGSALDGSTGGPLGIRAEDMSNAAWNYVFCKGAYDASIAIPQQSLDKMRAEFDYWYPLDLRVSGKDLVPNHLTFFLYNHVAIWPDRALWPRAVRANGHLLINSEKMSKSTGNFKTLADAIDEYSADAMRFALADAGDTLEDANFVDDTANAGILRLYTLLEWIKETLAAKDTLRSGPVETFAERVFESEINRAISRTDENYSKMLFRDALKTGFFDFQSAKDRYRDIVTSGGGALHAGLFERFVEVQALLLAPICPHYAEHLWGLIGKSGLAVKSPFPVAGPVDDALLSASAYLEKAEHDFIIRIKEALQPKNAAPPPASLSTGQIFISSSYPEWQQKTLDVMRALYTPATGLPENKAILEQLKDLPVIKPHMKKLMPFVQFVKDAVRDQGPGAMNLSLPFDEEKVITDNISYLMKKLKLSDIAVKPAAELDEKAREGCIPGKPFAFFA* # ORIGINAL: g1867.t1 original gene structure, not modified by PASA NODE_1220_length_12924_cov_42.9503 AUGUSTUS gene 5510 6418 . + . ID=g1867;Name=g1867.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS mRNA 5510 6418 . + . ID=g1867.t1;Parent=g1867;Name=g1867.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS exon 5510 6418 . + . ID=g1867.t1.exon1;Parent=g1867.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS CDS 5510 6418 . + 0 ID=cds.g1867.t1;Parent=g1867.t1 #PROT g1867.t1 g1867 MTDSVDESEEDEYQPDETLELEIIVSGAFFGPGNTTAPGRQRFESEEDEYQPDETLELEIIVSGAFFGPGNTTAPGRQRFVAIAKYNTLSRFILSSRELKETTIGAETELRTGARQRMRIRREANGQTSEGTEYENFTVLGVEIDGIIGFAPIVMWTHARPTVGPYFLSYIFGGHLDILERLIGGFTYRHVIANAEAAFSAAQCLAAATQQQLDPIAVAVQLFRKCNKEMRLSAKMAYREACVRPYERDMHLPIFGKTENKLVVACLNSMSSHGPFNQKVLKKTLDWINEIAISMMSDIILF* # PASA_UPDATE: g1868.t1, single gene model update, valid-1, status:[pasa:asmbl_853,status:12], valid-1 NODE_1220_length_12924_cov_42.9503 . gene 9308 12798 . + . ID=g1868;Name=g1868.t1 NODE_1220_length_12924_cov_42.9503 . mRNA 9308 12798 . + . ID=g1868.t1;Parent=g1868;Name=g1868.t1 NODE_1220_length_12924_cov_42.9503 . five_prime_UTR 9308 10422 . + . ID=g1868.t1.utr5p1;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . five_prime_UTR 10726 10833 . + . ID=g1868.t1.utr5p2;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . exon 9308 10422 . + . ID=g1868.t1.exon1;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . exon 10726 11827 . + . ID=g1868.t1.exon2;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . CDS 10834 11827 . + 0 ID=cds.g1868.t1;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . exon 12057 12185 . + . ID=g1868.t1.exon3;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . CDS 12057 12185 . + 2 ID=cds.g1868.t1;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . exon 12386 12798 . + . ID=g1868.t1.exon4;Parent=g1868.t1 NODE_1220_length_12924_cov_42.9503 . CDS 12386 12798 . + 2 ID=cds.g1868.t1;Parent=g1868.t1 #PROT g1868.t1 g1868 MVKIAGASHACRSVASAAAGKLVPTDNPNFACSALPNHWRCNKSLPHHFQVFALTHVPDDIEVTVVATNEENPSGDLRNASARMKDSVATFQDLRFMGRSGRGKSFNLVMTVHTNPPQVARLIEVIKVTVDGPREPRLRRMMTERNAGSRSGPSDDDSDMSSNDHSALETAMEGSSSDYAVGSPSSKSVGGLTRSSVVMVGRPSSTKPVIGSPGLRSHRSRSLNSMMRRSNSLPYMSPEGKRRALPAVNAAGSGPIKSEDLAGKMGKLQTVADHMVELQRIRSQSLDSGERAGSPFGPLSPPITPQTPPRELAGSAGMQGPTSGLLQGVSNGSLASSTSEYSMLSSVESLLFGNGNSYEMSEFSPPDLANNSNGERDFVFKALIPDEGVEGQSCIAVLKVGTAVQDITSIGLVFGETLPAFDKVDIAPDGTIYCVFRTPRKAEFRSSRVDVSAFYRMGELGEKIMHAGNAQTFTFKDSECGCTFHAFVVRLFAFSVVAGRGPVMFVGLCKL* # ORIGINAL: g1866.t1 original gene structure, not modified by PASA NODE_1220_length_12924_cov_42.9503 AUGUSTUS gene 2916 4376 . - . ID=g1866;Name=g1866.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS mRNA 2916 4376 . - . ID=g1866.t1;Parent=g1866;Name=g1866.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS exon 4161 4376 . - . ID=g1866.t1.exon1;Parent=g1866.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS CDS 4161 4376 . - 0 ID=cds.g1866.t1;Parent=g1866.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS exon 2916 4031 . - . ID=g1866.t1.exon2;Parent=g1866.t1 NODE_1220_length_12924_cov_42.9503 AUGUSTUS CDS 2916 4031 . - 0 ID=cds.g1866.t1;Parent=g1866.t1 #PROT g1866.t1 g1866 MTRIVFALVLAVVAVCLAVGVDAAGFKRREAWNGANAPKTMATKFEVGYSKLPLKASLSKLPWSDTYWPSYKGGIANRWNGNGDGFKYDINGGKAYYAKLSVADLQKLSPAEKFDLYRAKYDMPTVKQERERTQPTCPTWEGICHGWAPASLIYDEPSPVVLTNKDGIKVPFGSSDIKALLSYYLAVEVEKISDSPFDPLHTTFLGERCDDDFNSDPAAEKKPECRDVNAGSFHVIIANFLGLTKTGFVGDLTRDAEVWNQPVDSYESTIDADTTEVYAGAAAGTKRIVNVTTILHYAQEVYPQWTPVGSNQNKRKYVYSLELDGSGNIIGGEWGDSPYEDVESDRPDFLWMVQKPSFIGEWEPLEQVYAEATKTTTNGNNLGEYLDDMDHGMSRGVGLVIGVGIGGAVFGSLVTVGVAYFWNRRRSREEEGGAYQPLRSTNA* # PASA_UPDATE: g1865.t1, single gene model update, valid-1, status:[pasa:asmbl_852,status:12], valid-1 NODE_1220_length_12924_cov_42.9503 . gene 73 2421 . + . ID=g1865;Name=g1865.t1 NODE_1220_length_12924_cov_42.9503 . mRNA 73 2421 . + . ID=g1865.t1;Parent=g1865;Name=g1865.t1 NODE_1220_length_12924_cov_42.9503 . exon 73 151 . + . ID=g1865.t1.exon1;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . CDS 73 151 . + 0 ID=cds.g1865.t1;Parent=g1865.t1;5_prime_partial=true NODE_1220_length_12924_cov_42.9503 . exon 446 609 . + . ID=g1865.t1.exon2;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . CDS 446 609 . + 2 ID=cds.g1865.t1;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . exon 785 992 . + . ID=g1865.t1.exon3;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . CDS 785 992 . + 0 ID=cds.g1865.t1;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . exon 1242 1445 . + . ID=g1865.t1.exon4;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . CDS 1242 1445 . + 2 ID=cds.g1865.t1;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . exon 1725 2421 . + . ID=g1865.t1.exon5;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . CDS 1725 1834 . + 2 ID=cds.g1865.t1;Parent=g1865.t1 NODE_1220_length_12924_cov_42.9503 . three_prime_UTR 1835 2421 . + . ID=g1865.t1.utr3p1;Parent=g1865.t1 #PROT g1865.t1 g1865 IDDKNKRVLYNEYQVIKRLRRKANGFRRMPLFIDYFVDKRIGTHGCEFLIMERLDCSLLDVLKRSKSLISPKTLLIFGYKMIEAVEDLHRRGATLHLDVKPGNFLIGSGPNGEVNLYLCDFGCALEYPQDNASVRRGTVTWMSVRTHNGQSQNGFDDLESIGYVMLGLLKGLHGLPWSGLVSKYRQASDDKARKDFEKQIAASKSASVHELCSGVQATFSLDKRLERYISAIRFANTSAEPNYEFFKSILVGEM* # ORIGINAL: g13133.t1 original gene structure, not modified by PASA NODE_2832_length_5021_cov_37.722 AUGUSTUS gene 3705 4692 . - . ID=g13133;Name=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS mRNA 3705 4692 . - . ID=g13133.t1;Parent=g13133;Name=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 4639 4692 . - . ID=g13133.t1.exon1;Parent=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 4639 4692 . - 0 ID=cds.g13133.t1;Parent=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 4312 4450 . - . ID=g13133.t1.exon2;Parent=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 4312 4450 . - 0 ID=cds.g13133.t1;Parent=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 3705 4051 . - . ID=g13133.t1.exon3;Parent=g13133.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 3705 4051 . - 2 ID=cds.g13133.t1;Parent=g13133.t1 #PROT g13133.t1 g13133 MNEHSQDVKHVTWHPNEEILASASYDNTIKIFKEDADDWSCAQTLEGHTSTVWQIAFDPSGKWLASASDDKTVRIWTRDATGRWKCAGVLDGVHKRTVYSVDWCHVGSPRIATACADDSVRVFAVVADDATGNVEFKLVAEMAHAHRQDVNCVAWSPIDEGVIATGSDDGIVSLWRVSV* # ORIGINAL: g13131.t1 original gene structure, not modified by PASA NODE_2832_length_5021_cov_37.722 AUGUSTUS gene 187 1124 . - . ID=g13131;Name=g13131.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS mRNA 187 1124 . - . ID=g13131.t1;Parent=g13131;Name=g13131.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 869 1124 . - . ID=g13131.t1.exon1;Parent=g13131.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 869 1124 . - 0 ID=cds.g13131.t1;Parent=g13131.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 187 352 . - . ID=g13131.t1.exon2;Parent=g13131.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 187 352 . - 2 ID=cds.g13131.t1;Parent=g13131.t1 #PROT g13131.t1 g13131 MADGPRKRRMSPSSKRDEGESARGHERDAPNAREDALVWLIGLGIGAAIALVVSLSTTGTFAFEADDTIMATVGSAWRSINMRVFGVPEFSPSELSQYDGSDPTKPIYLAIMDRVYDVTAGKNTYGPGGSYSHFAGKDAS # ORIGINAL: g13132.t1 original gene structure, not modified by PASA NODE_2832_length_5021_cov_37.722 AUGUSTUS gene 1747 3474 . + . ID=g13132;Name=g13132.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS mRNA 1747 3474 . + . ID=g13132.t1;Parent=g13132;Name=g13132.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS exon 1747 3474 . + . ID=g13132.t1.exon1;Parent=g13132.t1 NODE_2832_length_5021_cov_37.722 AUGUSTUS CDS 1747 3474 . + 0 ID=cds.g13132.t1;Parent=g13132.t1 #PROT g13132.t1 g13132 MASRVVECAHPRADFNSIPIEIIVRHLAPHLDAMGLACLCRTSRALRLHLWHLRKFVLRKRYAWAFNTNATLRNSILHVIPLERLVIDVDCEYKVTDLSGLAGAKTVLLRRCQPLNGDISPLADAKTLSFVNGRNVVWDVSALRRIQKLSLVGCDNLEDVTCLADVHTLDLSRCSSLSDVSPLGGVHTLTLIECPLISDVSALGTVHSLNLSHCENVWDVSMLGTVHTLNLSGCIAVCDVSMLGAVHTLDLSYCGHIFDVSALGKVHTLLLVECESVQDVSSLGHVHTLQLNGCMGVTDVSSLGHVHELDLSLCGNVLDVSALTNVYTLRLVNARIPHVSALGKTHFLDLSGCPHLSDVSALGHVHTLILNSCESVTDVSALGSVYSLSLHSCGVTDVSALGRVHRLCIYGCPVADVSALGGVHTLQMGCSNFVTDISPLHFVHTLDVSGRTISTDVSSLGTVHSLDLSSCQDMIVGLHALGTVHTLSLASCASVTDADLPYLGRVDTLDLSRCENISDVSSLSRVRVLRLCRCPGIVDISALGSLYSLNVRQCKNITDLSPVANVPLLFADSAQ* # ORIGINAL: g5564.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 66422 73702 . + . ID=g5564;Name=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 66422 73702 . + . ID=g5564.t1;Parent=g5564;Name=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 66422 66454 . + . ID=g5564.t1.exon1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 66422 66454 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 66696 66926 . + . ID=g5564.t1.exon2;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 66696 66926 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 67119 67238 . + . ID=g5564.t1.exon3;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 67119 67238 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 67345 67437 . + . ID=g5564.t1.exon4;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 67345 67437 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 67556 67678 . + . ID=g5564.t1.exon5;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 67556 67678 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 67847 68050 . + . ID=g5564.t1.exon6;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 67847 68050 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 68179 68265 . + . ID=g5564.t1.exon7;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 68179 68265 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 68423 68775 . + . ID=g5564.t1.exon8;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 68423 68775 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 68904 69003 . + . ID=g5564.t1.exon9;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 68904 69003 . + 1 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 69430 69566 . + . ID=g5564.t1.exon10;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 69430 69566 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 69707 69917 . + . ID=g5564.t1.exon11;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 69707 69917 . + 1 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 70040 70258 . + . ID=g5564.t1.exon12;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 70040 70258 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 70421 70939 . + . ID=g5564.t1.exon13;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 70421 70939 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 71059 71202 . + . ID=g5564.t1.exon14;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 71059 71202 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 71351 71482 . + . ID=g5564.t1.exon15;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 71351 71482 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 71726 71869 . + . ID=g5564.t1.exon16;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 71726 71869 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 72163 72309 . + . ID=g5564.t1.exon17;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 72163 72309 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 72470 72556 . + . ID=g5564.t1.exon18;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 72470 72556 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 72818 72995 . + . ID=g5564.t1.exon19;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 72818 72995 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 73236 73342 . + . ID=g5564.t1.exon20;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 73236 73342 . + 2 ID=cds.g5564.t1;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 73574 73702 . + . ID=g5564.t1.exon21;Parent=g5564.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 73574 73702 . + 0 ID=cds.g5564.t1;Parent=g5564.t1 #PROT g5564.t1 g5564 MRSEERQALLHEGTGASVMSAYVEIVFDNSDSRIPIEREEVVLRRTIGVKKDEYFLDRKHVTKNDVMNLLESAGFSRSNPYYIVQQGKINSLALAKDAERLQLLKEVAGTSTYDERREESMRIMAETQSKREKIDDALKYIEQRISELDEEKDELQRYQVLDKDRRSLEYTIYDRELKTTRDELDAIESKRLTGSEQKARDHMAAQKDTDAIKTMEAHLKALSTEAQAKQHERKQLNEEAQQLAKQRAKLDITVRELEEDLQDDKGKKNKIQKEIAHLDGQITARKRELEQVMPMFEAEAKKERQMNDRMGECERRRGDLYARSGRSVQFHTVAERDAWINKEVKSISGVLAEKKKQTKSLSSEVADLKRKVEQRSKDITARTDLMETRRTEIDVVTAEITKFKAKREELTTLRKETWRRDADMDSSIELLKSEHQKAEKTLHGSMPRHIAIGLQTIDRLAREHKIGGVYGPLIDLFDCEEITFIAVEVTAGTSLFHIVVDTDDTASRLLELMNREKTGGRVTFMPLNRIQTPNVNFEKHTESDAVPLIEKLSYQPMFHPAMAQIFGKTLLCRSMDYAAHVSRTQDVDCVTVEGDQVSRKGSLTGGYHDARKLRLQSNRQRLKLKEQLNAALEESRKLKAQASEAETQVNMVMTDIQRAETRCASLKGSFEQLRIELRSHTSERDGAAASLDNKDRLLEKLVADSAALEQQVKSLQSELGTELSQHMSAQEQAEVSALTNEIAEIRRSLVEVLRTKAESEARKTELEQLLKNNLEKRREELASMLEDPDTNDRVGLHESRRSELKSLIAQEENARGRLESLEGRIAQIESEVRAVKQTLEDKRAEQRGLAERLEKEGKDMDKLLNKRSLVLQKKDEYVRKIRELGALPADAFEKYKDLDLQTLYKKLHKCNEGLKKYSHVNKKALDQYMSFSEQREDLLKRKRELDEGDRAIHELIQTLDQRKDEAIERTFKQVAKYFSEVFQELVPAGRGSLIMQRKQDEAESESAKGKGPAVRGGRVEQYTGIAIKVSFTSKTGDILLMQQLSGGQKSLVALAMIFAIQRCDPAPFYLFDEIDQALDAAHRTAVAEMIHRMCSSAQFITTTFRPEMLAHADKCYGIIYRNKISTVECVDKQQALQFIEDEARETHGQPVQPSQIAPSQIASQV* # ORIGINAL: g5560.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 49156 51623 . - . ID=g5560;Name=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 49156 51623 . - . ID=g5560.t1;Parent=g5560;Name=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 50589 51623 . - . ID=g5560.t1.exon1;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 50589 51623 . - 0 ID=cds.g5560.t1;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 50125 50405 . - . ID=g5560.t1.exon2;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 50125 50405 . - 0 ID=cds.g5560.t1;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 49595 49802 . - . ID=g5560.t1.exon3;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 49595 49802 . - 1 ID=cds.g5560.t1;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 49156 49284 . - . ID=g5560.t1.exon4;Parent=g5560.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 49156 49284 . - 0 ID=cds.g5560.t1;Parent=g5560.t1 #PROT g5560.t1 g5560 MRTVRSRGRLDPSTVEEITDLTHYDWSQESSTHPNPSRAASPAMFDSSAKSDGKGDGDAKGEGSSGEGRVGGLLAHNHRRHTRSRSADSATLERIGGNMRRATSIGDEDPSGSSPSLPVRAIHALTSNISSLTANLSTMTSLAGQYAGGLVSGARSSIASASASAGRHYHPVATNSRNDLHTAEGSSCSLAEDHASEEEDVPCAPMGRGFRIGAGGVHNGHGGHSATVVESVDLLADEEEAEGDEHVHLCGHDDKFEPVTQLPGHRFRIRLIDFAALPDWLKDNDFIHTGYRPELRSLKQCFISMLYVHNETANVYTHLLGFTTFLCLALYTCIHILRQSNWEDHIVFWIFFLGAMICLLLSSLFHLIFCHSPRYLRIFSRLDYTGIAFLIAGSYFPCIYYAFYCERKWKIVYLSAISIIGSICIVVACVPGFDKPKFRVHRLLLFVAMGFSGLVPLSHFLAVYGYDLAREAVAFNWLMVMASCYLGGGIMYAARVPERYAPGKFDILFHSHMLFHLLVVCGGLLHYYAMMRAFNFRDEFGCTREEAMYP* # PASA_UPDATE: g5565.t1, single gene model update, valid-1, status:[pasa:asmbl_5390,status:3], valid-1 NODE_2_length_91851_cov_41.6795 . gene 74050 75853 . - . ID=g5565;Name=g5565.t1 NODE_2_length_91851_cov_41.6795 . mRNA 74050 75853 . - . ID=g5565.t1;Parent=g5565;Name=g5565.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 75772 75853 . - . ID=g5565.t1.utr5p1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . exon 75697 75853 . - . ID=g5565.t1.exon1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . CDS 75697 75771 . - 0 ID=cds.g5565.t1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . exon 75432 75492 . - . ID=g5565.t1.exon2;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . CDS 75432 75492 . - 0 ID=cds.g5565.t1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . exon 75177 75307 . - . ID=g5565.t1.exon3;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . CDS 75177 75307 . - 2 ID=cds.g5565.t1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . exon 74722 75039 . - . ID=g5565.t1.exon4;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . CDS 74722 75039 . - 0 ID=cds.g5565.t1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . exon 74050 74337 . - . ID=g5565.t1.exon5;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . CDS 74179 74337 . - 0 ID=cds.g5565.t1;Parent=g5565.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 74050 74178 . - . ID=g5565.t1.utr3p1;Parent=g5565.t1 #PROT g5565.t1 g5565 MSSKSFEAQLTLVCGLLESKGSRDKLYRLLGYTARFISALIAKNAGVNHPAVKRLDIVTKSISQFRVMLRLFDDIPMLAWLLQYGLGKEEKDPIIRSMSVVGNVLGQLYYPLEHLAHSADLGLTNFDSLKWWYRADWAWLWGIVCGFIANFRRLQLNHISQRRIAGKNDLDASERRLQRKKLIAERNAIFLNMLQDSADLGLAVHWLPAGYLWAEKLPNWATGLCGMTSSVVGLYKAINSASSAPSL* # PASA_UPDATE: g5550.t1, single gene model update, valid-1, status:[pasa:asmbl_5381,status:12],[pasa:asmbl_5387,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 342 8586 . - . ID=g5550;Name=g5550.t1 NODE_2_length_91851_cov_41.6795 . mRNA 342 8586 . - . ID=g5550.t1;Parent=g5550;Name=g5550.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 8438 8586 . - . ID=g5550.t1.utr5p1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 7373 8586 . - . ID=g5550.t1.exon1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 7373 8437 . - 0 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 6815 7259 . - . ID=g5550.t1.exon2;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 6815 7259 . - 0 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 5424 6027 . - . ID=g5550.t1.exon3;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 5424 6027 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 5252 5291 . - . ID=g5550.t1.exon4;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 5252 5291 . - 1 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 4930 5064 . - . ID=g5550.t1.exon5;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 4930 5064 . - 0 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 4592 4701 . - . ID=g5550.t1.exon6;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 4592 4701 . - 0 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 4121 4194 . - . ID=g5550.t1.exon7;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 4121 4194 . - 1 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 3861 3911 . - . ID=g5550.t1.exon8;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 3861 3911 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 3620 3679 . - . ID=g5550.t1.exon9;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 3620 3679 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 3313 3363 . - . ID=g5550.t1.exon10;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 3313 3363 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 3048 3168 . - . ID=g5550.t1.exon11;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 3048 3168 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 2645 2756 . - . ID=g5550.t1.exon12;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 2645 2756 . - 1 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 1967 2447 . - . ID=g5550.t1.exon13;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 1967 2447 . - 0 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 1147 1508 . - . ID=g5550.t1.exon14;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 1147 1508 . - 2 ID=cds.g5550.t1;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . exon 342 737 . - . ID=g5550.t1.exon15;Parent=g5550.t1 NODE_2_length_91851_cov_41.6795 . CDS 342 737 . - 0 ID=cds.g5550.t1;Parent=g5550.t1;3_prime_partial=true #PROT g5550.t1 g5550 MVPFFRCTHRSGDVLCRCHSASLDELGSSADTMGVAQNSPRFLAQTDSPRNSFTLSENSVDRLKDDILITSGASQAIGLDLATYGASLKSATSGTSVVGVMQRQRESSLSRSNVDVSKGRFGGDVETVLRRRRSLSVAERNALTINALFGGAPTDALRKRSEIVANHLAISSKALNAKDEMDEGRDAVEMDSEQERQIVAKNGRLEVDIAAVMHGRLSESSRSAIFGLSHTAGIDNFADHSVLHKMQRDYVLSASASGRASEHGSLVAANGDGPSGLSLEVDANSRVGSFVSYLSPSATYLTVSEEVESVLGLHPSQLCGLSLYQLVHPDDCEKIAAHHSTLLGPYSDPSSQTNNVTWQDSSIGTRVAEHDALMGGNAIATEALRPSPYNSASHTASHLVNAPSFSFGLRHLTRSGDYCPVEAFVTVVRDAQSSMAVGIRQVISLVDVRQSSSAVCPGLRVDSTVLAATSRFGVPGVQPGSAVIGAFRRDFDLVAGLSSMSPGDQNCPLIASLPCETLSIVAITAITEGTGSHSCNIEEACADRHDSVRQVASNLLADTAATSEDLDAIELIPLSRQRLSAFNLARLADSVGRTANNGAPPTATGEHQHQLVTDSPAGVKIEIESVDSGLSSIVSGNDGRNPRVHVDSVLAGLSDFKRTVKGLRWSVVGKGRSLARKLTPNMKFGKQLRDRAVEPWREEYVSYHRLKRILKRLNVQMKEVENRKHIKNARSGYTQLSTEDDEETQAANGDADTAKAEFHAVIEADIRKINSFFETKIVEFQGEIATFQPPEEQIPLISSRVSLLSAGRASSYSGAGNANAVNGTESTVKSPSGAAATFTIGGSSSTIHQLHGDSASERHISPTGSVRMSRAGSDANMRSASAHTHSPIVHRLLTLFEHTQYLREYRELNYSGLRKIVKKFDKVTGEKTVDEFAARVRGEYFHSTAEIEEIEIVAEQLYQKLTHDPRGLRVALARHKLETGSSAGAKRPWKPIWLAFGLVVFIIFLVAPFWDGEKAKARRCLALLSMVMIYWVTEAVPFFVTALGVPMLSILLKVFVDENYCASHAATIVHALSANASVGLLGNGTVTCDPPLLSAEDAAKFAFSKVFDHTLALVLGGFSLSAAFSKYQYELHIAAFIQRRTGTRPRLFLLAFMLLGFFMSMWISNVAAPVLCTAILLPIVRDFPPNSPYAKAILLGLAFACNIGGMLSPISSPQNVVIVGILASYPGGSVGFGTWIQVALPFCIVAVLVLWAYIVVVMRPNDVQSIPQILWEKQKMGVDSYVVLFVTCATVVLWSTLQATESFFGDMGTIAFIPILVYFGSGILTKTDFNNFQWNLVFLIGGGNVLGAAVKSSNLLKIASDAIKPYLEV # ORIGINAL: g5554.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 26589 30894 . - . ID=g5554;Name=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 26589 30894 . - . ID=g5554.t1;Parent=g5554;Name=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 30296 30894 . - . ID=g5554.t1.exon1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 30296 30894 . - 0 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 29888 30074 . - . ID=g5554.t1.exon2;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 29888 30074 . - 1 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 29393 29670 . - . ID=g5554.t1.exon3;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 29393 29670 . - 0 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 29038 29127 . - . ID=g5554.t1.exon4;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 29038 29127 . - 1 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 28766 28841 . - . ID=g5554.t1.exon5;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 28766 28841 . - 1 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 28361 28480 . - . ID=g5554.t1.exon6;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 28361 28480 . - 0 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 27936 28162 . - . ID=g5554.t1.exon7;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 27936 28162 . - 0 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 27683 27723 . - . ID=g5554.t1.exon8;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 27683 27723 . - 1 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 27025 27468 . - . ID=g5554.t1.exon9;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 27025 27468 . - 2 ID=cds.g5554.t1;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 26589 26713 . - . ID=g5554.t1.exon10;Parent=g5554.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 26589 26713 . - 2 ID=cds.g5554.t1;Parent=g5554.t1 #PROT g5554.t1 g5554 MARIHPSPLTQAGVSSAIAGDIAATGHHPPREHLHGRSKAASGTAFLPTDAVVVDLDGSGRGSSRAGSASSLRSHASRASGRPSAVFAARPDFPKLDRPPLNPFLSATPHISGREWVQIIVSALLLIPLIKAVLIILIVGVAWLYAKIVLLFYPKKDAAGRSIPLPATSRWMTTPIFICVRAVLFAFGVTWITVKGRPKGPIAAPIVVANHSSLLDGPLMLLLSHGSPVGKIELSKVPVLSPLLDAARVVFVDRLNTNSRKQVLDEIAHRASDGRFPPVLLFPQGTVCNNRCVTMFHLGAFAPGLPVQPVVLRYPFANLDISWGPLVPTARLALRMLCQLTLPVEAEFLPTYYPSDAEKADPIMFGNNVRAAMVAHGGLTATEHCYDDVRLLRNKRLRDFALAHVVPQAMCKDLAALLALPADQVFLLISRFSSYCLGGEGSLSRERFKAALRLGSEAYASSLFAMCDVDRDGAISFVDAVMSLAWVNPDASIEYRAGPAFVVMDTDSDGIVRARDVARAMEKAHEILLCNLSANQTRQTPTAAPPIGTRKLFRKRSSAINFTIGVTFTPAGLTAMSAGAFAHIMATSDHAPPDALSTPAIDESVESPLSDGMNMVGGTGTTTPSKAQCEQPGVEGDRSVIADASSSSRPSSGAGNRLRRTRQQFATELTRVLGRLGVAVEKDDAALAVIEAVCALALHRVGILLTTDQQQRKARHRSRMSLASAGRA* # ORIGINAL: g5551.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 9177 9755 . + . ID=g5551;Name=g5551.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 9177 9755 . + . ID=g5551.t1;Parent=g5551;Name=g5551.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 9177 9267 . + . ID=g5551.t1.exon1;Parent=g5551.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 9177 9267 . + 0 ID=cds.g5551.t1;Parent=g5551.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 9430 9755 . + . ID=g5551.t1.exon2;Parent=g5551.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 9430 9755 . + 2 ID=cds.g5551.t1;Parent=g5551.t1 #PROT g5551.t1 g5551 MTRFARAGRKQFEDATPWDHQRAVVATDGGGQSTANVTAENESGKKTTESGKRKREPELAVGTQSSGDTAPAATEVAKRQKSEAVHGGPKVTEKSNAPTANGAARTKGSEKSRNAHLSGEQRDKLRDARRQRRQNAKV* # PASA_UPDATE: g5553.t1, single gene model update, valid-1, status:[pasa:asmbl_5386,status:12],[pasa:asmbl_5391,status:12],[pasa:asmbl_5392,status:12],[pasa:asmbl_5393,status:12],[pasa:asmbl_5394,status:12],[pasa:asmbl_5400,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 16859 26091 . + . ID=g5553;Name=g5553.t1 NODE_2_length_91851_cov_41.6795 . mRNA 16859 26091 . + . ID=g5553.t1;Parent=g5553;Name=g5553.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 16859 16882 . + . ID=g5553.t1.utr5p1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 17018 17064 . + . ID=g5553.t1.utr5p2;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 16859 16882 . + . ID=g5553.t1.exon1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 17018 17621 . + . ID=g5553.t1.exon2;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 17065 17621 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 17771 17837 . + . ID=g5553.t1.exon3;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 17771 17837 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 17963 18292 . + . ID=g5553.t1.exon4;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 17963 18292 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 18459 18573 . + . ID=g5553.t1.exon5;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 18459 18573 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 18811 19006 . + . ID=g5553.t1.exon6;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 18811 19006 . + 2 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 19165 19400 . + . ID=g5553.t1.exon7;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 19165 19400 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 19642 19814 . + . ID=g5553.t1.exon8;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 19642 19814 . + 2 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 20125 20560 . + . ID=g5553.t1.exon9;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 20125 20560 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 20688 20823 . + . ID=g5553.t1.exon10;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 20688 20823 . + 2 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 21074 21196 . + . ID=g5553.t1.exon11;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 21074 21196 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 21440 21535 . + . ID=g5553.t1.exon12;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 21440 21535 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 21715 21871 . + . ID=g5553.t1.exon13;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 21715 21871 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 22178 22365 . + . ID=g5553.t1.exon14;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 22178 22365 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 22491 22575 . + . ID=g5553.t1.exon15;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 22491 22575 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 22739 22849 . + . ID=g5553.t1.exon16;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 22739 22849 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 23082 23323 . + . ID=g5553.t1.exon17;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 23082 23323 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 23460 23651 . + . ID=g5553.t1.exon18;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 23460 23651 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 23988 24121 . + . ID=g5553.t1.exon19;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 23988 24121 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 24487 24950 . + . ID=g5553.t1.exon20;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 24487 24950 . + 2 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 25384 25502 . + . ID=g5553.t1.exon21;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 25384 25502 . + 0 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . exon 25750 26091 . + . ID=g5553.t1.exon22;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . CDS 25750 26056 . + 1 ID=cds.g5553.t1;Parent=g5553.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 26057 26091 . + . ID=g5553.t1.utr3p1;Parent=g5553.t1 #PROT g5553.t1 g5553 MASYLDTKSVPIASDVGVKKAVPMDTLGSSSSSKRKEVSTADEDNAILTIKWIEFYSSSLAREVLTWLLCIVTGGLLFIVTRWYPSLETRIRFRRVESNDPAADRVLVSSLDDILTITDVLSLDPSDIAAGWKPVRHVPFRFRLDASNSIPRQFRWRHERFWYGADSQSWSRRAFDTSLTYAEIHRIAAERACETLEKSPFEASGHNELASRFGVSSAAEAYELRRQLTYGLNLLDINPPTFLALVVTEMLKPFFAFQVFAVGVWFAQAYLTYASLIAFMTICSVLSAAYNQWRNMGALQKIALHECDVTKLVLASNQNGKPVFKRIKVRSSALEPGDLVEVTRNMVFPCDLAILSGHCVVSESMLTGESAPVLKTALPVEKVSDGVKFKIDSDREAKYTLFSGTNVLQTKFPSAAPAGAFSSSGVPETIWEFASTSVEGASTGRRKSGAESACMPVVATVLRTGFSTAKGQLIRAILFPKPAKFDFESQSYRFMWILVLGLTTGCAATIVYYVQNGETWQDTIIDILNLITITIPPALPLALTIGISISFARLNKKKMFCTAPPRISASGRVNCLCFDKTGTLTEDGLTLRGVHPVSYQYQGGPRIAPIESNLETLYGSGIGQNVLSGANNATTSLALSHLLAACHSISVLDDNEKEDYDHDKAKSGELPQGAGSAPHYVGDPLEIQMFASTGWKYLQRPLPGEQPVSIELSRIWNHPNLASHSETIVYPTDTFSGRPGTFALAVLRRFDFDSELRRMSTIVQHLPLGDCGPATDIWSLLVKGAPESLKDICAPASVPIDFDEQLHRLTLEGFRVLACAYRSLPVGGNGLTAGRMDLERDLVFAGFLVMENRLKKETRPALEEYTRAGLRQARIMVTGDNPLTATAVARQCGPFFLRPSRIALLLDLEGDRLVLRDVLRPEQWHDFDAFVQRRGSRASESYERRDDGSEDQPIIDLMEIQNLARGSTLSAGPYTLTSLPTDADIVVTGRAFFMLQSRHQDQVAARTERRAKETQTRTLWGRIAAMKLPFVNRSTPYHRIKMEDEPTLFELVLSRANIFARMSPQNKQELMLALQDLNFVVCMTGDGANDSGALKAADIGISIASKPADEATVTDESSVQAAPSIAAPFSTPLADIGAVRIALTEGRSALVSSFSVFKFMFEYGIIQFTSVLILYRIQCNFYDYQYLWADLALVFPLVILIPYLRASDKLDRGKPESNLLGISVFVSIIGITAIMVLFQLVSAEMLKAEWWYRVPVTQPGFNPMYTVDGGQIFTFANFQYVFVGIAFSQNFDGFREDLWRNIPLVVVYSALFIVNSVFLVADSSNIQDAFHIVAMPAELVYRLWGLALGNGLAFILFERFCVRHKSDDEEPIDVEAIVAEIGSAAGPTPELAETTPSSVLPSAASCFPCVRALAMPSRRYSRVSDDHAAQGGQGQDASTSTWATTVTCGITLGLPIRAPVPRYVLCEKISAPIWSATQGPETALTFS* # PASA_UPDATE: g5566.t1, single gene model update, valid-1, status:[pasa:asmbl_5399,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 76054 80364 . + . ID=g5566;Name=g5566.t1 NODE_2_length_91851_cov_41.6795 . mRNA 76054 80364 . + . ID=g5566.t1;Parent=g5566;Name=g5566.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 76054 76058 . + . ID=g5566.t1.utr5p1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 76054 76133 . + . ID=g5566.t1.exon1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 76059 76133 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 76227 76454 . + . ID=g5566.t1.exon2;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 76227 76454 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 76601 76696 . + . ID=g5566.t1.exon3;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 76601 76696 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 76907 77054 . + . ID=g5566.t1.exon4;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 76907 77054 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 77284 77948 . + . ID=g5566.t1.exon5;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 77284 77948 . + 2 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 78077 78267 . + . ID=g5566.t1.exon6;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 78077 78267 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 78394 78550 . + . ID=g5566.t1.exon7;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 78394 78550 . + 1 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 78775 78912 . + . ID=g5566.t1.exon8;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 78775 78912 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . exon 79149 80364 . + . ID=g5566.t1.exon9;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . CDS 79149 79358 . + 0 ID=cds.g5566.t1;Parent=g5566.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 79359 80364 . + . ID=g5566.t1.utr3p1;Parent=g5566.t1 #PROT g5566.t1 g5566 MVVCATCGAVGHKAAKCAFRSKDPQELLEIFASADKSQRRTGGSAEDANEDYVPLRKRLLRKSTGREDNFVRSYYVVHPDIAALSERDVEWLRRSNDIEVEFEGDPCPRPIRQFRELGLDGALLHRLDALGFKVPTPIQMQSLPCALSGRDIVGIAETGSGKTLAYLLPLVLALRGCPETKAGDGPLALILAPTRELVEQIYSDLSVLLSVYGAIQATRATAPPFAPTAESQQPPHTHVVTPFTPLFSNAYSVDAHLGPHEMSVDGVLPRDDVDEHNDGRLMYATWHSYASQHVTPMHAGPMPPFGVPHQLSSTHALHGDGAADQPPATDVSSASLPIRSILGVCGGVPLAQQIGPLSRGVDVVVATPGRLADLVNRGAVPLTRLIYLVVDEADRMLSMGLEGQLRHLVGMATNVRVARQTLLWSATMPRSLERLARSAVLNPVTIYAGSSRGGTAVNVEQRVLFMHSYQKKTALLDALRRTETPPVIVFCNSAGTVDKVVSLLRSEQFHAAGIHSEKAQGFRFRVMRAFKEGRLDVLVATDVASRGIDVTGVTHVIQFDLAETLEDYLHRCGRTGRAGRTGLATGFLTYECKYAGLLKDYLEGVGQAVPAALQVELAKFGKTVVRTELGDKVVT* # PASA_UPDATE: g5552.t1, single gene model update, valid-1, status:[pasa:asmbl_5382,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 14365 16371 . + . ID=g5552;Name=g5552.t1 NODE_2_length_91851_cov_41.6795 . mRNA 14365 16371 . + . ID=g5552.t1;Parent=g5552;Name=g5552.t1 NODE_2_length_91851_cov_41.6795 . exon 14365 14396 . + . ID=g5552.t1.exon1;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . CDS 14365 14396 . + 0 ID=cds.g5552.t1;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . exon 14569 14941 . + . ID=g5552.t1.exon2;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . CDS 14569 14941 . + 1 ID=cds.g5552.t1;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . exon 15040 15323 . + . ID=g5552.t1.exon3;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . CDS 15040 15323 . + 0 ID=cds.g5552.t1;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . exon 15458 16371 . + . ID=g5552.t1.exon4;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . CDS 15458 16139 . + 1 ID=cds.g5552.t1;Parent=g5552.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 16140 16371 . + . ID=g5552.t1.utr3p1;Parent=g5552.t1 #PROT g5552.t1 g5552 MTAPIQGGDDRTATVSAAASGSGSPPESRSPSTLSALHADSPSSDMDAEHGRTDGSATTPSDPAVASVLNGQLKFQTASRFVLKLRTLLDSKENNEAICWSDDGSCIVIGDTTKFQLMILAKSFKTNNFSSFVRQLNMYGFHKVNGFKHAPEKKSPVVFQHPNFHRDNPELLLNIRRAQTRSSAARSQSAQSATPPPSSGPRGLAGRPGKITGSPYNDTPHMRQSYMHAPPYAQAPDSEHHNDGYSRMAEPLYYARAMPMHMMGPYGPGPHVYSPYSNYGPPPQHVLPMYDGQGYSYPQHAQYYGGYNPGVRPAFNGEYQQMQVPLPTKGPMAAIAEGQPSPDRIAYQSGENATVVNIDRDGSMAALTSAVALHQSGMSAGAPMHAAAPLEHAAILADLAQAHSPKDASSSPRESGTVSDAERIHSNGDTGTPPGRILPLKREETEENGSRLWRSF* # PASA_UPDATE: g5555.t1, single gene model update, valid-1, status:[pasa:asmbl_5395,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 31581 37664 . + . ID=g5555;Name=g5555.t1 NODE_2_length_91851_cov_41.6795 . mRNA 31581 37664 . + . ID=g5555.t1;Parent=g5555;Name=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 31581 32180 . + . ID=g5555.t1.exon1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 31581 32180 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 32308 32909 . + . ID=g5555.t1.exon2;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 32308 32909 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 33189 33488 . + . ID=g5555.t1.exon3;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 33189 33488 . + 1 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 33745 33883 . + . ID=g5555.t1.exon4;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 33745 33883 . + 1 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 34037 34254 . + . ID=g5555.t1.exon5;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 34037 34254 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 34458 34607 . + . ID=g5555.t1.exon6;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 34458 34607 . + 1 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 34823 35003 . + . ID=g5555.t1.exon7;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 34823 35003 . + 1 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 35145 35387 . + . ID=g5555.t1.exon8;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 35145 35387 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 35601 36881 . + . ID=g5555.t1.exon9;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 35601 36881 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . exon 37018 37664 . + . ID=g5555.t1.exon10;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . CDS 37018 37485 . + 0 ID=cds.g5555.t1;Parent=g5555.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 37486 37664 . + . ID=g5555.t1.utr3p1;Parent=g5555.t1 #PROT g5555.t1 g5555 MDSPMLTEDVDDIDCIDLEDHSVASIRKHLSFSPDVPNPPVAKGHHGPSKLNTTVDALNTTAGTEASTDGREPIRVFLRLKPLSLDAGKAEHGCMDFDSTESRVTLIPPETGSRNNGPRDPQHFYFSRVFAPQTTQSEFFENTALPLVADLARGRNGLMFAYGITNSGKTFTIQGTPADAGVLPRAVDVLFNSIRGKISGADVKYRPLHFSSVESFQDATLRDRFDSALREEVLNGRDPIQALKDAVLQQRREAGVAPTPLRAAGKTAQAQQNAQNIAQNSNAQNGALPNNKDATAAFNLSSLNMTALAELAADDEFSAPRAAPDSRSVSVSEDATYAVYVSYTEIYNEYVYDLLTPAVATLPVKRRPVLKMMQDREHLFCVEGAREILVRSPEEAYTVLRYGQRNRRVAATILNQESSRSHGVLTIRLMTIPKGPTPPSVSVLTFVDLAGSERASRTQNKGAQLKEASHINTSLMTLARCIETLRSNQLHPGRQEVVPFRDSKLTLLLHNFLRGTGKAVMVVNAGQSASDFVETAKVMRLSAVAKQVKTTAEIGARVQTHRRRNNAEAAAVNAAVAAQNGATAVQITALSAQCAKYEEYIDDLEKENDDLELKLENLLRDHAENIARVEAEVRDEVAREMAEQLVQMENSYKTAIAESNDACDERTERRADIHSRALQSAKKRAGTRSRVAFAGSASALDREAERKAVSQSVAAGTSPLAQSSIAMETDMISVASVGVATELTGAVISEVVAKATHLMDEVSRAEKESKLERELAEIRTKFEEIAPLVQCLQAGITARDHEIARLKSEVKMGTVTAASLRRTNSIRAPASNVFAAAFATNSTAPRIPVETQTDTTPVADSEAQTDATPMETAAAHIDSVDSNGLVTAATAALEHLDDMLDIAIAVGDVSTTSTVDADGSVAIVGKRKSTRGRKTRSPKRCRSDIAEEGAVTEEPARLGAEGTKRRKLSGEGNTSVVKRNNVSFAEDSMLESSVIDRNPDRNQSYLEAVAPTMPLAEQVEAVMQMETQEAAPPALKQATKRKSSVKGTGRVSAAAAQHVTGPSSVVAPETVVTATTTAARRKSMRANYAANTDPFAGEVEDKENAGRAVPVAVPVPTPQTATTEAAVPAVEKKDKGTYGARITESSYRVSANSVRGRVRADGAVAKGPRLGVLVKNSPIAKRLVQSGVATQSHMRTLTPEKRADSRVLGNVLGEITARTEGAANTVVVEDAIGGAQAKAPTKPNAVVAPKAEQPMARTIVDRLFEKPHPVVTRILFFVGLATEVLQQDLIEFISYAVNSDATRSTANITARKLIDLMMTESSTTAGKEAAGKKGAAPTDGFGVLLEKTRKRQNHYSIHPALQQYVTDRCNIASGDAIENIRNEVADYILLKGR* # ORIGINAL: g5567.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 79920 80900 . - . ID=g5567;Name=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 79920 80900 . - . ID=g5567.t1;Parent=g5567;Name=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 80636 80900 . - . ID=g5567.t1.exon1;Parent=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 80636 80900 . - 0 ID=cds.g5567.t1;Parent=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 80377 80533 . - . ID=g5567.t1.exon2;Parent=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 80377 80533 . - 2 ID=cds.g5567.t1;Parent=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 79920 80226 . - . ID=g5567.t1.exon3;Parent=g5567.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 79920 80226 . - 1 ID=cds.g5567.t1;Parent=g5567.t1 #PROT g5567.t1 g5567 MAGNDDVFSQLVLSETSPCKRFEFVSSRFRPTVCASCAEPFTSHERSALTQDDAIRYLSILQEKDVAHRVWTDPLTGGILYVGGYAASGLSYVAKERITHIVNAAGGLEGFFVAWAKQLPDVEKLGVQFLRLGWTDCDTQRLFETAKWDTLRRAVLFIEEGIRGGGRVVVHCAQGKSRSATAAVAYVMAKERLSRDAALAHVRSGRRVAEPNNGFMRQLAEFELSDDLAQLREELRHVSATS* # PASA_UPDATE: g5563.t1, single gene model update, valid-1, status:[pasa:asmbl_5389,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 58156 64894 . - . ID=g5563;Name=g5563.t1 NODE_2_length_91851_cov_41.6795 . mRNA 58156 64894 . - . ID=g5563.t1;Parent=g5563;Name=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 64884 64894 . - . ID=g5563.t1.exon1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 64884 64894 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 64097 64530 . - . ID=g5563.t1.exon2;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 64097 64530 . - 1 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 63561 63706 . - . ID=g5563.t1.exon3;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 63561 63706 . - 2 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 63286 63394 . - . ID=g5563.t1.exon4;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 63286 63394 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 62194 63185 . - . ID=g5563.t1.exon5;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 62194 63185 . - 2 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 60638 62017 . - . ID=g5563.t1.exon6;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 60638 62017 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 60006 60415 . - . ID=g5563.t1.exon7;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 60006 60415 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 59386 59845 . - . ID=g5563.t1.exon8;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 59386 59845 . - 1 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 59053 59151 . - . ID=g5563.t1.exon9;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 59053 59151 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 58717 58903 . - . ID=g5563.t1.exon10;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 58717 58903 . - 0 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . exon 58156 58545 . - . ID=g5563.t1.exon11;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . CDS 58322 58545 . - 2 ID=cds.g5563.t1;Parent=g5563.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 58156 58321 . - . ID=g5563.t1.utr3p1;Parent=g5563.t1 #PROT g5563.t1 g5563 MGRRYVKPLELLTRHEIDGHHVTLIDANHCPGAAVFVFQTHVASSCTADDAADSVPAEKHTRTFVHTGDFRHHPRICAQIAEALTGVAGARSVIDAIYLDTTYCNPRHTFPPQDRPVEFIAETVRRLMDEERDSGATATLFVIATYVIGKERVLLRTADVCKTRLVVDKRKYDILSLLDLPSMDMFTTDWRESSVHVESWGTLGEMAPGGWTFLPNFKALSDMLDHYAPKFNRVVAFVPTGWTHLFKANEDSNGVRYSVQQKGDNLLVYSVPYSEHSSYSELREFVGALRPVRIVATVVPSASAESASRRMAACFNDLVDARRVKSDFFARLGAPSMGQTGPVQSETSTAFVAAENDSGDAVCEPLCNETATPCVDADAPAADAKVTPAAGGKRPVSKRGKRKASAGSRDHIEAAVEGSSGGRRSKRGRTAVDEGDVSAMEGVVGVGSCKRDAEEDDSVECPICNARVKASSINQHIDVCVSQGNDTHVQASGSRCDKEGGTGGYDVAMVNAVPNKCASDVAHSVDEAAAADEAATDDGGVAQLGSLLPAGVATSHLRRLLAAADGSIERALNFYFDQQSQGELPNEAKAVPTAPTNRRAGKITPQKGSHSALSSPAKGKGGPKQPSITSFFRLGALSTPTKPESGGIDGGIMETASPFHRDSDVERKIPTTGTLHRSVDVNDVSANSSRDATTHASPFAAPPAPCGTVLASSSEAEDDAELMGLQVGVPVPYAFLSQTFARLEETNSRIAITAHLSDALRAIARANPPDVLPAVYLASNTLSAPFEGIDMGVGGSTVSQAVCEATGRSADGLRQDYEVTGDLGDAAELARAKVRTILKPKPLTVAGVFSTLRSMCGMRGQGSLASKKEAIKRLIVSSQGRETRYVVRTLVCNLRIGAVGKTLAVAVGHAFVPKDAPAAVRAHAASVVKRCIAVCPSWGELIPVLLGGGIGALERQCSVKLGVPVRPMLGRITRDLDEVVRRMEARDFAADFKFDGQRVQAHILSRGESGAGVRLFSRHLDDMTGRFPDVRAIIETAACPHVISAILDAEIIAAEWDATAESVGGTANDVIGRLRVLPFQRLTNRPRKEASVNNSSIVADMQSTTDAPRSTTDRSGGKVTPASVCVCAFDLMYLNGESFLDRPFAERRAAMADAFMDLQGRFMHVPHLDFASADTATPDAADATKARLSDFLQAAFDARCEGLMIKTLTIKPLASVHADVDDARDDDVDEYEDDEGRGVVGVGACAAGSASSAPPQAVGGVGDVRGAVLATYEPSVRSDNWLKVKRDYVEGIADSLDLVPIAGWYGNGRKAGWLSPFLMAAYEPDTGCFRSVCKCMSGFTDAFYKEMTKFYVEEGRSSNVPKPYFIVSDGLRPDFWLEPVQVWEIRGADLTLSPVHTAGAGYVDTGDGNGVSARGVSLRFPRFIRVRDDKGIEDATTGQEIASMYVRQLKDGGHRRVAPESNSTLKEESAAAARADDNSDGDD* # ORIGINAL: g5568.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 83114 84887 . + . ID=g5568;Name=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 83114 84887 . + . ID=g5568.t1;Parent=g5568;Name=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 83114 83249 . + . ID=g5568.t1.exon1;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 83114 83249 . + 0 ID=cds.g5568.t1;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 83415 83576 . + . ID=g5568.t1.exon2;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 83415 83576 . + 2 ID=cds.g5568.t1;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 83777 83925 . + . ID=g5568.t1.exon3;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 83777 83925 . + 2 ID=cds.g5568.t1;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 84154 84250 . + . ID=g5568.t1.exon4;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 84154 84250 . + 0 ID=cds.g5568.t1;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 84454 84887 . + . ID=g5568.t1.exon5;Parent=g5568.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 84454 84887 . + 2 ID=cds.g5568.t1;Parent=g5568.t1 #PROT g5568.t1 g5568 MVEHAEGRKLARMASNGSTCSDGRVGSNQFYLVVHFVTGEISHVLVEPTATLGSVLVRVCKRRHLELECHRFWALDADLELELDRKVGDFPVPEIRCAPVAGQHVARRAYNYREDLNALERILGEHKRHLQVLQRRHEETYQPPSSLETEIAHFSKVVAMMETERCRLINLLGLTCMLSTKSCVPDICSTDEEDYVHHERKGSTCSSITSESSDATSRDRHSMQSLSSSAIAMTGCTDGRSPRVSECQEVPDVPVGSVALLEDQDGDCIPTSASGGATVVVGAVADVNVSVGAPEASRWGCAAHESRGGYGFSHQSESARPAAAL* # ORIGINAL: g5569.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 86813 88102 . + . ID=g5569;Name=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 86813 88102 . + . ID=g5569.t1;Parent=g5569;Name=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 86813 86944 . + . ID=g5569.t1.exon1;Parent=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 86813 86944 . + 0 ID=cds.g5569.t1;Parent=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 87084 87579 . + . ID=g5569.t1.exon2;Parent=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 87084 87579 . + 0 ID=cds.g5569.t1;Parent=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 87744 88102 . + . ID=g5569.t1.exon3;Parent=g5569.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 87744 88102 . + 2 ID=cds.g5569.t1;Parent=g5569.t1 #PROT g5569.t1 g5569 MLFVRFLAVVIVGLCFAAASVSAWKCEGFTSEPPKPTTCACNPMTLEDKFKLADHIIRIEILQEFIVGNFSRYYTARVREIYQTTKAGVHCGRIILVHTAQSKNACGITFETGGTYLVTAAGGWLVRPSVTMVAVNQCGVTSQYCDVVGDACVRRALRAFKPQCECRSSSKAFMPVCAACPGGGKQDTFANYFEAYCAGYSVIYPGFCKDCMARCSKSPYRLCMWGHSRCCADGTWVCPTGGDHNTPQSWQYPCPECDDMPRTCDSQPLILPCPPNIGELIEDYVQKAPTRPSTYGCGDGCAFPANDIDTWLPSAIENWWSDLPTGDD* # ORIGINAL: g5558.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 44402 45493 . - . ID=g5558;Name=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 44402 45493 . - . ID=g5558.t1;Parent=g5558;Name=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 45204 45493 . - . ID=g5558.t1.exon1;Parent=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 45204 45493 . - 0 ID=cds.g5558.t1;Parent=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 44958 45096 . - . ID=g5558.t1.exon2;Parent=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 44958 45096 . - 1 ID=cds.g5558.t1;Parent=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 44402 44722 . - . ID=g5558.t1.exon3;Parent=g5558.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 44402 44722 . - 0 ID=cds.g5558.t1;Parent=g5558.t1 #PROT g5558.t1 g5558 MSSVGRDVPRGHWLREGLIGLGTGVLYGGTAVVVGQPFDCIKTKMQAQTGYESGGMLRAFSQTVKTEGVKGLYRGVLPPLLGSGIYRSVQFGVYESIFTHLQDSNWGRVTIPYTGGIESRVVVGGLAASLVRAVIETPLEYVKRHVPAVASQPLIGPFLVAGASSTLGWIAVWPLECLKSNVQAGVGNFRQSLSRILSLPGGPLGLYRGLLPGVVRSFLANGTSFAVMTAAQKAASVLGLRGDRRDPPA* # PASA_UPDATE: g5557.t1, single gene model update, valid-1, status:[pasa:asmbl_5396,status:3], valid-1 NODE_2_length_91851_cov_41.6795 . gene 41171 44159 . + . ID=g5557;Name=g5557.t1 NODE_2_length_91851_cov_41.6795 . mRNA 41171 44159 . + . ID=g5557.t1;Parent=g5557;Name=g5557.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 41171 41292 . + . ID=g5557.t1.utr5p1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 41171 41381 . + . ID=g5557.t1.exon1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 41293 41381 . + 0 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 41510 41596 . + . ID=g5557.t1.exon2;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 41510 41596 . + 1 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 41714 42042 . + . ID=g5557.t1.exon3;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 41714 42042 . + 1 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 42229 42292 . + . ID=g5557.t1.exon4;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 42229 42292 . + 2 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 42479 42725 . + . ID=g5557.t1.exon5;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 42479 42725 . + 1 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 42867 42937 . + . ID=g5557.t1.exon6;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 42867 42937 . + 0 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 43154 43302 . + . ID=g5557.t1.exon7;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 43154 43302 . + 1 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 43447 43604 . + . ID=g5557.t1.exon8;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 43447 43604 . + 2 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . exon 43783 44159 . + . ID=g5557.t1.exon9;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . CDS 43783 43926 . + 0 ID=cds.g5557.t1;Parent=g5557.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 43927 44159 . + . ID=g5557.t1.utr3p1;Parent=g5557.t1 #PROT g5557.t1 g5557 MGGILCCAAEQAACCVGGMACKAMCFGKCCGCKQSNGSRAGYAVILLFATITAWLMNGSFIRDKLSHSSLSFHCQKEDDGCYGTLAVYRISLALCLFHAAHAVFLYGVTSSKDSRAKLQNGFWPIKFLALAGITVGCFYIPSKSLIDYGWSAMAGAAIFIACQLLLLVDFAHYWNEKWVANHDAAEHKRWFYALTAASVTMYVSAIVMTSLLYAYFTPAHSGNVGKCGTNTAFITVNLIAFVILAFVAVNDTIQEYNPRSGLLQSSLVALYSTYLVWSAISSEPESDSFHCNSLGGTRDTQSVSTVFGVIFAFVAIVYAALGASSSEESITGKTRTTGTESALLTERGAAGRNDESDEEDSLDDERTGTQYSYTFFHTMFALAAMYMCMVITGWNVVQDSTVTGTLTVDQSWASTWVKIGSSWFVILLYLWTVIAPCVLRNREFN* # ORIGINAL: g5556.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 37910 40513 . - . ID=g5556;Name=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 37910 40513 . - . ID=g5556.t1;Parent=g5556;Name=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 40468 40513 . - . ID=g5556.t1.exon1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 40468 40513 . - 0 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 40221 40369 . - . ID=g5556.t1.exon2;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 40221 40369 . - 2 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 39482 39680 . - . ID=g5556.t1.exon3;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 39482 39680 . - 0 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 39173 39240 . - . ID=g5556.t1.exon4;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 39173 39240 . - 2 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 38833 38894 . - . ID=g5556.t1.exon5;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 38833 38894 . - 0 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 38528 38640 . - . ID=g5556.t1.exon6;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 38528 38640 . - 1 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 38275 38385 . - . ID=g5556.t1.exon7;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 38275 38385 . - 2 ID=cds.g5556.t1;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 37910 38097 . - . ID=g5556.t1.exon8;Parent=g5556.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 37910 38097 . - 2 ID=cds.g5556.t1;Parent=g5556.t1 #PROT g5556.t1 g5556 MVARGVLAFPFGNGGVPAGIRFEGDGRTITSRDNRLHGHLDIVNPSYVLVGPRDAVFVSSFLTDKINAVHVLLGQIIAEHGSLDGPWGLALGDDGRTLYVASFTTSQIHRYDIETRAFLGAFGLEDEMDCPEGITFGPDGLLWVASFLDNRIVKYNVSTGNFAGHVDIPKGMLRGPEDLAFGANGVLYITSHFSDSIVRCTPLVGDKMQCHDEFVRVTKPVGLAIGPADGHLYVASYTMHSVLRFDPQGNFRGVTAAGHGLRGPSGVSFSENGQSLAVASYNSNKVLLYNSTITSTYSVPTCKLPSSSNTS* # ORIGINAL: g5570.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 89606 91750 . + . ID=g5570;Name=g5570.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 89606 91750 . + . ID=g5570.t1;Parent=g5570;Name=g5570.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 89606 91362 . + . ID=g5570.t1.exon1;Parent=g5570.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 89606 91362 . + 0 ID=cds.g5570.t1;Parent=g5570.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 91531 91750 . + . ID=g5570.t1.exon2;Parent=g5570.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 91531 91750 . + 1 ID=cds.g5570.t1;Parent=g5570.t1 #PROT g5570.t1 g5570 MICVAGEVYSQSAWNINKESFSPSAISQSDGEPSMEPLLPDVVASDGSASAALPPSSVIAEDQVRQVVETVRNLAHAQKSHDTLGLMAGIPPELLGDLVVAVDKWRRSYSTNKSARKLRRLAHRTRDQGLMMQSPLRIQRRNVEIQRTNAANARDALAAGVLGSATANHGERLIDAVPSDDIAQRIDSVVDSGQVSDTNATAYTPSDGCAIVADTGKAAPAVDQTVHYIKARKCYVCKVRFTLIHHFYPTMCTTCGDLNFSKRGLSADLRGRVALVTGGRIKIGRQIVLALLRSGAHVHVTSRFPGDALLRFAEEPDYADWSERITLHAIDLRDIGGVVRFANHLKETLARLDILIHNAAMTIRRPPAFYAHLLRIEAAVQLKATCNESIALGDGRVVSTRPIMHTNGGCNDGAQRLSQCAMPDLSLGATVEGGQEVLTLASIPHAAALSQLRVTSEDSSCNPAAFPARSYGDDGQQIDRRNVNSWMLRLGSIDHAEALEIALVNQHAPLIITNTLTELLIKTAGDTTGDVAFPVGMDRACAWVVCVSSMEGNFSRANKTDRHPHTNMAKAALNMMARTAGPGLARKGVYMTAVDTGWVTDERPAALAEAMHHTTAFEPPLDNIDGAMRVMQPIVEGINFGWLPGGVFIKDYAVQPQW* # ORIGINAL: g5561.t1 original gene structure, not modified by PASA NODE_2_length_91851_cov_41.6795 AUGUSTUS gene 52533 54289 . - . ID=g5561;Name=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS mRNA 52533 54289 . - . ID=g5561.t1;Parent=g5561;Name=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 54229 54289 . - . ID=g5561.t1.exon1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 54229 54289 . - 0 ID=cds.g5561.t1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 53971 54046 . - . ID=g5561.t1.exon2;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 53971 54046 . - 2 ID=cds.g5561.t1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 53776 53848 . - . ID=g5561.t1.exon3;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 53776 53848 . - 1 ID=cds.g5561.t1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 53529 53658 . - . ID=g5561.t1.exon4;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 53529 53658 . - 0 ID=cds.g5561.t1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 52911 53380 . - . ID=g5561.t1.exon5;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 52911 53380 . - 2 ID=cds.g5561.t1;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS exon 52533 52700 . - . ID=g5561.t1.exon6;Parent=g5561.t1 NODE_2_length_91851_cov_41.6795 AUGUSTUS CDS 52533 52700 . - 0 ID=cds.g5561.t1;Parent=g5561.t1 #PROT g5561.t1 g5561 MDADNLIPVLKVGAYFATLIVPYNARATYAALGATALVFTWMNIIGFMADDMNEYQNVAQWLKESEFFAKAYVMVSDRAAGWWWSSQLLLWVLPFVVFVSAEASKDTGSTITGGDLSIPATVALLWIAFGGAISVAFPMFLCLVDHGKRRIAKLRDADVVERPSASGGSASLTARVGEWILLGVVVGGIASISAFPYLKGIEFNRNLLFLHALLLVPAAVRVPRDSRLKLPLAIIAIAALVHQGHQFRIALQESNDLAALLAGGFANKCQAGISLDIVFGTLETAAFVYFDTGRWLPAVVVAVVSPFTSLASVFAIILVSRYGRV* # PASA_UPDATE: g5562.t1, single gene model update, valid-1, status:[pasa:asmbl_5398,status:12], valid-1 NODE_2_length_91851_cov_41.6795 . gene 54524 58117 . + . ID=g5562;Name=g5562.t1 NODE_2_length_91851_cov_41.6795 . mRNA 54524 58117 . + . ID=g5562.t1;Parent=g5562;Name=g5562.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 54524 54645 . + . ID=g5562.t1.utr5p1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 54524 54774 . + . ID=g5562.t1.exon1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 54646 54774 . + 0 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 55155 55214 . + . ID=g5562.t1.exon2;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 55155 55214 . + 0 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 55348 55460 . + . ID=g5562.t1.exon3;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 55348 55460 . + 0 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 55664 55811 . + . ID=g5562.t1.exon4;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 55664 55811 . + 1 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 56034 56390 . + . ID=g5562.t1.exon5;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 56034 56390 . + 0 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 56546 56729 . + . ID=g5562.t1.exon6;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 56546 56729 . + 0 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . exon 56928 58117 . + . ID=g5562.t1.exon7;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . CDS 56928 57601 . + 2 ID=cds.g5562.t1;Parent=g5562.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 57602 58117 . + . ID=g5562.t1.utr3p1;Parent=g5562.t1 #PROT g5562.t1 g5562 MDMLKKEIDDYRAALEALTASYKREKSERSHYESECKGAREAQAALQEELRIRADSVDVYKQQVADMSAELGRCWRERTRLEGVVRDVEGELRSLRPLKDSHDILVAEVEQLREKTIVATAEAAHAVSEMERMNSERGAVASQIESSMSKLLEFKEAKVMAESARDEALMEREQLRSKVATLEKDVVCLRRQLVDGGAGQKTQPHGNGAHVTAVAPVESEPSVGVAAPDAATSLHGIGRHKRDNTKEALKMQETVIDTLLRENMNLQSEIKKTREDARDVLAAAGALRVLSRRSISGSDREVELETRYLEARRVAKLLAEKLQDRNDALAALRDCNRMLGERVRELEAAAPSASNHSMFSVSTMTERRYTSAEVATNTERSDPARIEGDKQETRSRTQSTESQKGTQRSSSLSSNGGESADYSAPRRQLTDAVNGNLARSNSNGSSHSDNIARARKAPDASPASVAIATAPTTWRRSSNDSDGEDFSDLNSLVSPELRGHMGDMERRLGTSVNASKSSSLASSSQKTKDRNNSIGSGSLGGERRQSAIVIEPCD* # PASA_UPDATE: g5559.t1, single gene model update, valid-1, status:[pasa:asmbl_5397,status:3], valid-1 NODE_2_length_91851_cov_41.6795 . gene 46012 48505 . + . ID=g5559;Name=g5559.t1 NODE_2_length_91851_cov_41.6795 . mRNA 46012 48505 . + . ID=g5559.t1;Parent=g5559;Name=g5559.t1 NODE_2_length_91851_cov_41.6795 . five_prime_UTR 46012 46205 . + . ID=g5559.t1.utr5p1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 46012 46412 . + . ID=g5559.t1.exon1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 46206 46412 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 46526 46609 . + . ID=g5559.t1.exon2;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 46526 46609 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 46771 46844 . + . ID=g5559.t1.exon3;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 46771 46844 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 47078 47234 . + . ID=g5559.t1.exon4;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 47078 47234 . + 1 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 47470 47535 . + . ID=g5559.t1.exon5;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 47470 47535 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 47766 47840 . + . ID=g5559.t1.exon6;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 47766 47840 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . exon 48064 48505 . + . ID=g5559.t1.exon7;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . CDS 48064 48186 . + 0 ID=cds.g5559.t1;Parent=g5559.t1 NODE_2_length_91851_cov_41.6795 . three_prime_UTR 48187 48505 . + . ID=g5559.t1.utr3p1;Parent=g5559.t1 #PROT g5559.t1 g5559 MGHGHEAPKSTRYVDATDPDIIDESQKVALEEFKQVVAEWPGLTERQKNFIDDAAIFRYLRARQYNVKKATDMFRATLDWREEFKPDEVTIQKVHDQAVAGSNYTRGRDSLGHPTVYMRVHRDPPGNAEEKLNMIVYVLERAIRSMDASKGVEKLIYIIDLSAFSMSWSSRDLKVGREWLKILQNHYPERCYRILLIDAPTVFWLFWRMLTPFVDPITKNKVVFLHGQKKIDYFAEHFNIEELEEDYGGGMPSDYNATMDK* # PASA_UPDATE: g6392.t1, single gene model update, valid-1, status:[pasa:asmbl_7336,status:12], valid-1 NODE_4458_length_1592_cov_35.9539 . gene 255 1526 . - . ID=g6392;Name=g6392.t1 NODE_4458_length_1592_cov_35.9539 . mRNA 255 1526 . - . ID=g6392.t1;Parent=g6392;Name=g6392.t1 NODE_4458_length_1592_cov_35.9539 . five_prime_UTR 1450 1526 . - . ID=g6392.t1.utr5p1;Parent=g6392.t1 NODE_4458_length_1592_cov_35.9539 . exon 943 1526 . - . ID=g6392.t1.exon1;Parent=g6392.t1 NODE_4458_length_1592_cov_35.9539 . CDS 943 1449 . - 0 ID=cds.g6392.t1;Parent=g6392.t1 NODE_4458_length_1592_cov_35.9539 . exon 255 689 . - . ID=g6392.t1.exon2;Parent=g6392.t1 NODE_4458_length_1592_cov_35.9539 . CDS 255 689 . - 0 ID=cds.g6392.t1;Parent=g6392.t1;3_prime_partial=true #PROT g6392.t1 g6392 MRDGTTTNTIPTNPALCANNNCDTDPEFGRHEPYEWYMNCKYRTRNYGLFTANQLPRNRNQGKNTAQFTRQNNNANRFGYECPEERDYYPYWQPTMWRDIAILTTNVQNCPMYQAQSQNVKPRYFCDVPKEIINKRKNDQGFIPITQTECEALRMTTADGKNVTGMWTLVPAFGIAAPECREAEWTRDNHLGNVAGGYPALYNWTIPADIVAEKCVFRVRYNISTADYPAWNVGSIAPTLTNANSSQNQGNDQTASIGLPARYFADKGAAAATTATSRGYVFKNNPNVQIFADSTFALQLAINPAQYGRTFQDR # ORIGINAL: g13342.t1 original gene structure, not modified by PASA NODE_2981_length_4611_cov_43.6885 AUGUSTUS gene 3430 4257 . + . ID=g13342;Name=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS mRNA 3430 4257 . + . ID=g13342.t1;Parent=g13342;Name=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS exon 3430 3588 . + . ID=g13342.t1.exon1;Parent=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS CDS 3430 3588 . + 0 ID=cds.g13342.t1;Parent=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS exon 3774 3825 . + . ID=g13342.t1.exon2;Parent=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS CDS 3774 3825 . + 0 ID=cds.g13342.t1;Parent=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS exon 3998 4257 . + . ID=g13342.t1.exon3;Parent=g13342.t1 NODE_2981_length_4611_cov_43.6885 AUGUSTUS CDS 3998 4257 . + 2 ID=cds.g13342.t1;Parent=g13342.t1 #PROT g13342.t1 g13342 MQIVIELIEMRELGAARSLLRQTDPMVTMKEQQPERYLHLENLLARPYFDAGDAYPSGSSKERRRAAIAQALSSDVSVVPPSRLLSLLGNAIKWQQYQGLLPPGTSIDLFRGKAPQAAAEEEKYPTTLAVTIKVYPPPPPMRMVSAVIRARMSVLG* # PASA_UPDATE: g13341.t1, single gene model update, valid-1, status:[pasa:asmbl_5347,status:12],[pasa:asmbl_5348,status:12], valid-1 NODE_2981_length_4611_cov_43.6885 . gene 80 2471 . - . ID=g13341;Name=g13341.t1 NODE_2981_length_4611_cov_43.6885 . mRNA 80 2471 . - . ID=g13341.t1;Parent=g13341;Name=g13341.t1 NODE_2981_length_4611_cov_43.6885 . five_prime_UTR 2059 2471 . - . ID=g13341.t1.utr5p1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 1880 2471 . - . ID=g13341.t1.exon1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 1880 2058 . - 0 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 1656 1767 . - . ID=g13341.t1.exon2;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 1656 1767 . - 1 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 1333 1428 . - . ID=g13341.t1.exon3;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 1333 1428 . - 0 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 1032 1094 . - . ID=g13341.t1.exon4;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 1032 1094 . - 0 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 690 812 . - . ID=g13341.t1.exon5;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 690 812 . - 0 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 310 439 . - . ID=g13341.t1.exon6;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 310 439 . - 0 ID=cds.g13341.t1;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . exon 80 152 . - . ID=g13341.t1.exon7;Parent=g13341.t1 NODE_2981_length_4611_cov_43.6885 . CDS 80 152 . - 2 ID=cds.g13341.t1;Parent=g13341.t1;3_prime_partial=true #PROT g13341.t1 g13341 MASRATGQLIVKLVEAHSLKQRGKAQSPCRPYCVIEYERTEVVSRTVEGEEPVWDETFYFDTCRQDGELRVSVFDRNAPVECDMFGTLKLRPTRTPGKVADNWFKLLPVEWKDRTKGEIRLIISYEDNKKGLSIDDFDLLRVLGKGSFGKVMQVRKKDSGRIYAMKILKKESIVARSEVEHTKAERHVLAQVNNPFLVSLKFCFQTPEKVYMVLDFVHGGELFFHLQKEYMFGEDRARFYAAELVLAIAHLHKLNIVY # ORIGINAL: g972.t1 original gene structure, not modified by PASA NODE_3205_length_4018_cov_32.015 AUGUSTUS gene 89 2103 . - . ID=g972;Name=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS mRNA 89 2103 . - . ID=g972.t1;Parent=g972;Name=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 2080 2103 . - . ID=g972.t1.exon1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 2080 2103 . - 0 ID=cds.g972.t1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 1569 1742 . - . ID=g972.t1.exon2;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 1569 1742 . - 0 ID=cds.g972.t1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 1265 1333 . - . ID=g972.t1.exon3;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 1265 1333 . - 0 ID=cds.g972.t1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 993 1100 . - . ID=g972.t1.exon4;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 993 1100 . - 0 ID=cds.g972.t1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 709 817 . - . ID=g972.t1.exon5;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 709 817 . - 0 ID=cds.g972.t1;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS exon 89 213 . - . ID=g972.t1.exon6;Parent=g972.t1 NODE_3205_length_4018_cov_32.015 AUGUSTUS CDS 89 213 . - 2 ID=cds.g972.t1;Parent=g972.t1 #PROT g972.t1 g972 MCASSACVLVGVESVPVILVGNKIDTRGSDLTNKGLEEELMPVMNAFKEVETCVECSAKSVLNISEVFYFAQKAVLHPTAPLYDARDHTLKPDCVAALRRIFRLCDEDKDDLLNDDELNEFQASQRRCFNAPLQQQELEGVKEVVREHTADGVNNNALTEKGFLFLHRLFIQRGRLETTWTVLRKFGYGDDLQLREDFLHPM* # ORIGINAL: g8053.t1 original gene structure, not modified by PASA NODE_2332_length_6701_cov_40.8169 AUGUSTUS gene 3907 6569 . - . ID=g8053;Name=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS mRNA 3907 6569 . - . ID=g8053.t1;Parent=g8053;Name=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 6534 6569 . - . ID=g8053.t1.exon1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 6534 6569 . - 0 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 6260 6305 . - . ID=g8053.t1.exon2;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 6260 6305 . - 0 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 5984 6063 . - . ID=g8053.t1.exon3;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 5984 6063 . - 2 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 5661 5759 . - . ID=g8053.t1.exon4;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 5661 5759 . - 0 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 5220 5316 . - . ID=g8053.t1.exon5;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 5220 5316 . - 0 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 4874 5107 . - . ID=g8053.t1.exon6;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 4874 5107 . - 2 ID=cds.g8053.t1;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 3907 4073 . - . ID=g8053.t1.exon7;Parent=g8053.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 3907 4073 . - 2 ID=cds.g8053.t1;Parent=g8053.t1 #PROT g8053.t1 g8053 MANRGGGKDPAKARQKADKARQAAHLADLQYQEIVRQLEDIRVGWEEEFVMCAQRFQELDVERINFTRDTIWNCLNVFVAQTKFDEQSNEKIRKSLEACNPEADVEQVALLLGTGRERPPGAVYINYYNGPTAAPNAYETGRSSRASFSAGGGSGGGSASGGSVRASSFGAASTSGGTMRGAPPPVMEEPEPPRSTGEFVRALYDYEAQGDEELSFRAGDYITIVSREDDLWWLGEINGFQGMLPTNFVEPC* # PASA_UPDATE: g8051.t1, single gene model update, valid-1, status:[pasa:asmbl_4060,status:12], valid-1 NODE_2332_length_6701_cov_40.8169 . gene 191 884 . + . ID=g8051;Name=g8051.t1 NODE_2332_length_6701_cov_40.8169 . mRNA 191 884 . + . ID=g8051.t1;Parent=g8051;Name=g8051.t1 NODE_2332_length_6701_cov_40.8169 . exon 191 265 . + . ID=g8051.t1.exon1;Parent=g8051.t1 NODE_2332_length_6701_cov_40.8169 . CDS 191 265 . + 0 ID=cds.g8051.t1;Parent=g8051.t1;5_prime_partial=true NODE_2332_length_6701_cov_40.8169 . exon 480 884 . + . ID=g8051.t1.exon2;Parent=g8051.t1 NODE_2332_length_6701_cov_40.8169 . CDS 480 671 . + 0 ID=cds.g8051.t1;Parent=g8051.t1 NODE_2332_length_6701_cov_40.8169 . three_prime_UTR 672 884 . + . ID=g8051.t1.utr3p1;Parent=g8051.t1 #PROT g8051.t1 g8051 EYIDLVRKILKAKEDVMWACHVDHQSQEEALDALARMEAFPVTKELMEETKVGKIVHKLAHYKDDVVRNRARDVLGKWYDVLVKPEAK* # ORIGINAL: g8052.t1 original gene structure, not modified by PASA NODE_2332_length_6701_cov_40.8169 AUGUSTUS gene 1061 2464 . - . ID=g8052;Name=g8052.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS mRNA 1061 2464 . - . ID=g8052.t1;Parent=g8052;Name=g8052.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS exon 1061 2464 . - . ID=g8052.t1.exon1;Parent=g8052.t1 NODE_2332_length_6701_cov_40.8169 AUGUSTUS CDS 1061 2464 . - 0 ID=cds.g8052.t1;Parent=g8052.t1 #PROT g8052.t1 g8052 MDGCITSPFVYDDRACAPSADGSDCFELPHLVNRQPSVDYFEECRKMWLELQLIVRQKTVLEAQKNALESKLHIGAPVPLTAACEPRALSQINSFNDNSSIADVERKRALVSHDSGISGTSSQSSDSSEEDDGLGADNQSTEDEGHLKKRRRRTYAELNRKFVCPFGSCKRCYASEGSLNQHLKIKHGGGTVRSRTVIVPATTLVHTPPASPPGVPGGAPGVHMSVVQMQVQQRFPYSSLRSMMPSVDLGDHVTPAMGSLADMQSAMGHIDMELPSTMQENEPLFAALGETFAACDASMGGGARAGSNMLGGGGGHDVLQRMSVHKHVQSVSGDSASDDLARMYAALVSDGGPSFPVVTAQHMQPYSAQQTQHMHSSFAVLAPTMTTTRLLQQQRELQSFVASSSAASTTLKATNGGRHKAVGSAAPMNILPRRFEPSLDAHGKQVNGLGSAVLHENLALVFGSGEM* # PASA_UPDATE: g1514.t1, single gene model update, valid-1, status:[pasa:asmbl_7916,status:12], valid-1 NODE_5184_length_979_cov_36.0088 . gene 45 954 . + . ID=g1514;Name=g1514.t1 NODE_5184_length_979_cov_36.0088 . mRNA 45 954 . + . ID=g1514.t1;Parent=g1514;Name=g1514.t1 NODE_5184_length_979_cov_36.0088 . five_prime_UTR 45 76 . + . ID=g1514.t1.utr5p1;Parent=g1514.t1 NODE_5184_length_979_cov_36.0088 . exon 45 849 . + . ID=g1514.t1.exon1;Parent=g1514.t1 NODE_5184_length_979_cov_36.0088 . CDS 77 849 . + 0 ID=cds.g1514.t1;Parent=g1514.t1 NODE_5184_length_979_cov_36.0088 . exon 939 954 . + . ID=g1514.t1.exon2;Parent=g1514.t1 NODE_5184_length_979_cov_36.0088 . CDS 939 954 . + 1 ID=cds.g1514.t1;Parent=g1514.t1 #PROT g1514.t1 g1514 MLHHGPDNVPLNPKDRKRFLDAAAKMAQRGLRVVAMAYGPELDSLAFVGLVGIVDPPREGVNEAIRQLHAGGVQVAMVTGDSQDTAIAIAEHLGFFDRGVDTSLSGAQIETMDEIELGSVIRRVTVFYRTSPKHKMAIVRAFQNAGKVVAMTGDGVNDAPALRLADIGIAMGKGGSDVCKEAADMILVDDNFGTILSAIEEGKSIYYNIKNFLRFQLSTSIAALSLITISTFLGYPNPLNAMQILWINIIMDGPPAQSVHVP* # PASA_UPDATE: g11320.t1, single gene model update, valid-1, status:[pasa:asmbl_3924,status:12], valid-1 NODE_2279_length_6937_cov_39.441 . gene 1731 6851 . + . ID=g11320;Name=g11320.t1 NODE_2279_length_6937_cov_39.441 . mRNA 1731 6851 . + . ID=g11320.t1;Parent=g11320;Name=g11320.t1 NODE_2279_length_6937_cov_39.441 . five_prime_UTR 1731 1893 . + . ID=g11320.t1.utr5p1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 1731 1918 . + . ID=g11320.t1.exon1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 1894 1918 . + 0 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 2229 2831 . + . ID=g11320.t1.exon2;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 2229 2831 . + 2 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 3311 3624 . + . ID=g11320.t1.exon3;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 3311 3624 . + 2 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 3836 3974 . + . ID=g11320.t1.exon4;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 3836 3974 . + 0 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 4410 4587 . + . ID=g11320.t1.exon5;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 4410 4587 . + 2 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 4852 5023 . + . ID=g11320.t1.exon6;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 4852 5023 . + 1 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 5350 5392 . + . ID=g11320.t1.exon7;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 5350 5392 . + 0 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 5689 5727 . + . ID=g11320.t1.exon8;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 5689 5727 . + 2 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 6009 6111 . + . ID=g11320.t1.exon9;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 6009 6111 . + 2 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 6389 6590 . + . ID=g11320.t1.exon10;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 6389 6590 . + 1 ID=cds.g11320.t1;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . exon 6756 6851 . + . ID=g11320.t1.exon11;Parent=g11320.t1 NODE_2279_length_6937_cov_39.441 . CDS 6756 6851 . + 0 ID=cds.g11320.t1;Parent=g11320.t1 #PROT g11320.t1 g11320 MNNGNLSDDGGGFTDPEVEISDNDSVSGEKKKKKRFSTLRRVLSAVRKDKDKDKEKSGNLSRSNSKQLGSTTSTHEPLETAKSAASSTDVVSDDHATTARRSHSDPTPPQLVSRSSMDSKRLSGEMKPSFPTLSGEHSGSLTGKGPLGSVKAQEELTKKRTSLLSRQGSSSRISLTSLDAKQSDDAPVKTHVLKVTLVEGIDMAIRDKTGTSDPYVVFKLGKNRYKSKTIMKNCNPKWNETFTFVAADVTETLHITAYDYDMGIGGDDFLGKAEVHLSSLQVGGNETMTLTLLDIESGQLCITLSLEEELIESKSASKRSQSKTASTKRSDSNPGSRKSRSGTLNVILLGGRNLLAMDEEGTSDPYVKFKFGSQKGKSKVVPKSLDPVWKEAFEFNLHEGADTLSLSVFDKDFLGKDDYMGEVDIPIESGSGSGRTIDKWYPLEKGGKGEIHLLLTVNLHDVDADTAEAQAALADTKNGPKLRSVGAVEVSVISAKDLRAADIGGTSDPYVIVALGNTMFRTETKYKTLNPEWNRTHTLNVRDVHAVLDVQVFDEDKNDSPDFLGRLQIPLLDVRPGPQWYALKSKNLLDRAKGMVQIDVKLTFDKCIFCGGVCTIERPLCNIAWMARDTTCDTERT* # PASA_UPDATE: g11319.t1, single gene model update, valid-1, status:[pasa:asmbl_3923,status:12],[pasa:asmbl_3925,status:12], valid-1 NODE_2279_length_6937_cov_39.441 . gene 48 1227 . + . ID=g11319;Name=g11319.t1 NODE_2279_length_6937_cov_39.441 . mRNA 48 1227 . + . ID=g11319.t1;Parent=g11319;Name=g11319.t1 NODE_2279_length_6937_cov_39.441 . five_prime_UTR 48 49 . + . ID=g11319.t1.utr5p1;Parent=g11319.t1 NODE_2279_length_6937_cov_39.441 . exon 48 394 . + . ID=g11319.t1.exon1;Parent=g11319.t1 NODE_2279_length_6937_cov_39.441 . CDS 50 394 . + 0 ID=cds.g11319.t1;Parent=g11319.t1;5_prime_partial=true NODE_2279_length_6937_cov_39.441 . exon 640 1227 . + . ID=g11319.t1.exon2;Parent=g11319.t1 NODE_2279_length_6937_cov_39.441 . CDS 640 945 . + 0 ID=cds.g11319.t1;Parent=g11319.t1 NODE_2279_length_6937_cov_39.441 . three_prime_UTR 946 1227 . + . ID=g11319.t1.utr3p1;Parent=g11319.t1 #PROT g11319.t1 g11319 LPAKYWLRGTLAPADQTRDGFYDMGQSRSGSAFATLTDLQARPVDKRRAVVLVDSSSDAEFARQIDYAIQTVKPCETIRTQAERLAVFVAECMGGVVAPERLANFSFELPISQIKVELQSNVVPVGSIRTGIFYHRALLFKAIADRIGLSVSLVRGVYNRAWNTVALGDGAPLESSSSGRSLSSRGAMREYVVDLMHDPGHLYEISSSDAQKYMRL* # ORIGINAL: g3511.t1 original gene structure, not modified by PASA NODE_3941_length_2484_cov_39.6787 AUGUSTUS gene 1013 2074 . + . ID=g3511;Name=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS mRNA 1013 2074 . + . ID=g3511.t1;Parent=g3511;Name=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS exon 1013 1102 . + . ID=g3511.t1.exon1;Parent=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS CDS 1013 1102 . + 0 ID=cds.g3511.t1;Parent=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS exon 1272 1424 . + . ID=g3511.t1.exon2;Parent=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS CDS 1272 1424 . + 0 ID=cds.g3511.t1;Parent=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS exon 1737 2074 . + . ID=g3511.t1.exon3;Parent=g3511.t1 NODE_3941_length_2484_cov_39.6787 AUGUSTUS CDS 1737 2074 . + 0 ID=cds.g3511.t1;Parent=g3511.t1 #PROT g3511.t1 g3511 MADIFPIDLNDGPDDPDRTESDFEETDEDLNEVVPMERDLSDENIAVPLMDAVLMARTQQERVGPESFQLLRVLGKGGYGKVFQVRKTNGRDIGKIFAMKVLRKATIIRKKKDTEHTKAERNILEEVKHPFIVNLQYAFQTDGKLYLILDYVGGGELFMQLEKEGIFMEDTACFYLAEIVMALGHLHKLGIIY # PASA_UPDATE: g4447.t1, single gene model update, valid-1, status:[pasa:asmbl_5117,status:12], valid-1 NODE_2849_length_4971_cov_34.7827 . gene 4319 4782 . - . ID=g4447;Name=g4447.t1 NODE_2849_length_4971_cov_34.7827 . mRNA 4319 4782 . - . ID=g4447.t1;Parent=g4447;Name=g4447.t1 NODE_2849_length_4971_cov_34.7827 . five_prime_UTR 4782 4782 . - . ID=g4447.t1.utr5p1;Parent=g4447.t1 NODE_2849_length_4971_cov_34.7827 . exon 4716 4782 . - . ID=g4447.t1.exon1;Parent=g4447.t1 NODE_2849_length_4971_cov_34.7827 . CDS 4716 4781 . - 0 ID=cds.g4447.t1;Parent=g4447.t1;5_prime_partial=true NODE_2849_length_4971_cov_34.7827 . exon 4319 4551 . - . ID=g4447.t1.exon2;Parent=g4447.t1 NODE_2849_length_4971_cov_34.7827 . CDS 4381 4551 . - 0 ID=cds.g4447.t1;Parent=g4447.t1 NODE_2849_length_4971_cov_34.7827 . three_prime_UTR 4319 4380 . - . ID=g4447.t1.utr3p1;Parent=g4447.t1 #PROT g4447.t1 g4447 LQDQLSGFQAVALKTQIDGIKKVMNRVFYELKNEFDPEEQYAGGDVMATIVATIKGQTMQSIKEATAVATGADDAASD* # PASA_UPDATE: g7097.t1, single gene model update, valid-1, status:[pasa:asmbl_4485,status:12], valid-1 NODE_2518_length_6027_cov_43.2396 . gene 2007 3613 . - . ID=g7097;Name=g7097.t1 NODE_2518_length_6027_cov_43.2396 . mRNA 2007 3613 . - . ID=g7097.t1;Parent=g7097;Name=g7097.t1 NODE_2518_length_6027_cov_43.2396 . five_prime_UTR 3548 3613 . - . ID=g7097.t1.utr5p1;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . five_prime_UTR 2979 2983 . - . ID=g7097.t1.utr5p2;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . exon 3548 3613 . - . ID=g7097.t1.exon1;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . exon 2885 2983 . - . ID=g7097.t1.exon2;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . CDS 2885 2978 . - 0 ID=cds.g7097.t1;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . exon 2466 2727 . - . ID=g7097.t1.exon3;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . CDS 2466 2727 . - 2 ID=cds.g7097.t1;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . exon 2007 2323 . - . ID=g7097.t1.exon4;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . CDS 2239 2323 . - 1 ID=cds.g7097.t1;Parent=g7097.t1 NODE_2518_length_6027_cov_43.2396 . three_prime_UTR 2007 2238 . - . ID=g7097.t1.utr3p1;Parent=g7097.t1 #PROT g7097.t1 g7097 MAAKLFIGGLAWATDSDSLRAAFEKFGEVVDARVVLDRETQRSRGFGFITYNSEEEARAAIDAMNGQDLDGRQIRVDRASENSGGGGGGRGGFGGGDRRGGYGGSRGGSSFRGRTPYERPEGGSRGGYGGSSRGGSSYGGGRRDEY* # ORIGINAL: g7096.t1 original gene structure, not modified by PASA NODE_2518_length_6027_cov_43.2396 AUGUSTUS gene 119 1021 . - . ID=g7096;Name=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS mRNA 119 1021 . - . ID=g7096.t1;Parent=g7096;Name=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS exon 941 1021 . - . ID=g7096.t1.exon1;Parent=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS CDS 941 1021 . - 0 ID=cds.g7096.t1;Parent=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS exon 520 745 . - . ID=g7096.t1.exon2;Parent=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS CDS 520 745 . - 0 ID=cds.g7096.t1;Parent=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS exon 119 293 . - . ID=g7096.t1.exon3;Parent=g7096.t1 NODE_2518_length_6027_cov_43.2396 AUGUSTUS CDS 119 293 . - 2 ID=cds.g7096.t1;Parent=g7096.t1 #PROT g7096.t1 g7096 MLFGGTELCVALAAVTCAMVAFRRHSKKSNHSVRSSTPRASGDGPDIVIVGAGIVGSAMAAALARDGRKVTLIERDYAEPDRIVGELLQPGGIIALQKLGLEGCTEGIDAIVERGYIVHSGKRSVHLVYPKNEEGKQYTGRSFHHGKFIMKLREAALKET # PASA_UPDATE: g7098.t1, single gene model update, valid-1, status:[pasa:asmbl_4484,status:12], valid-1 NODE_2518_length_6027_cov_43.2396 . gene 4355 5554 . + . ID=g7098;Name=g7098.t1 NODE_2518_length_6027_cov_43.2396 . mRNA 4355 5554 . + . ID=g7098.t1;Parent=g7098;Name=g7098.t1 NODE_2518_length_6027_cov_43.2396 . exon 4355 5554 . + . ID=g7098.t1.exon1;Parent=g7098.t1 NODE_2518_length_6027_cov_43.2396 . CDS 4355 5407 . + 0 ID=cds.g7098.t1;Parent=g7098.t1 NODE_2518_length_6027_cov_43.2396 . three_prime_UTR 5408 5554 . + . ID=g7098.t1.utr3p1;Parent=g7098.t1 #PROT g7098.t1 g7098 MGASVAKPITVPGNVHFDQVRATLPRMDGKVVAVTGCTSGIGLVCARVCGELGARIIMLNRASERADAALKTLRDAGINAEFVACDLTSFESVRAAAANLLSLLNDVGLDVLCNNAGVMGMPDQATGDGYDVQMQANHLSHFLLTAEIWPLLEKALTLRGEARVVNHSSGARKKPAKAMEARYLEKNGGALGGDWWPIAKWNRYQQSKLANLLFTYGLQSRSEKHGVAVNGETRHVKALCAHPGATLTNLQMKTAAAGGNGLLDTYILNSTMAQAHSEEDGSLGLILCCAAADVKGGSFYGPAAITGDAVLLPEERDPPAEELVWERSVASTGAKYFGEGATEAAVPSSS* # ORIGINAL: g9217.t1 original gene structure, not modified by PASA NODE_2631_length_5602_cov_41.827 AUGUSTUS gene 1360 1770 . + . ID=g9217;Name=g9217.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS mRNA 1360 1770 . + . ID=g9217.t1;Parent=g9217;Name=g9217.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 1360 1770 . + . ID=g9217.t1.exon1;Parent=g9217.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 1360 1770 . + 0 ID=cds.g9217.t1;Parent=g9217.t1 #PROT g9217.t1 g9217 MTSSTEYAAKEHPKMKCADTSLRGYQKPTIHPGHPFDKLLELASCADDPGIESKMHNSTMHTEATVNRIDGKHCPFWGYVHAAHACLRVLKTDPRSCANICKGDRSISKSRGTPSQLHPHDSGVEIECDAPPTPHA* # ORIGINAL: g9218.t1 original gene structure, not modified by PASA NODE_2631_length_5602_cov_41.827 AUGUSTUS gene 2282 4677 . + . ID=g9218;Name=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS mRNA 2282 4677 . + . ID=g9218.t1;Parent=g9218;Name=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 2282 2361 . + . ID=g9218.t1.exon1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 2282 2361 . + 0 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 2552 2688 . + . ID=g9218.t1.exon2;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 2552 2688 . + 1 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 2923 3021 . + . ID=g9218.t1.exon3;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 2923 3021 . + 2 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 3187 3387 . + . ID=g9218.t1.exon4;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 3187 3387 . + 2 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 3635 3729 . + . ID=g9218.t1.exon5;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 3635 3729 . + 2 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 4032 4179 . + . ID=g9218.t1.exon6;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 4032 4179 . + 0 ID=cds.g9218.t1;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 4523 4677 . + . ID=g9218.t1.exon7;Parent=g9218.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 4523 4677 . + 2 ID=cds.g9218.t1;Parent=g9218.t1 #PROT g9218.t1 g9218 MSITIVALAGSTALVALIIVVSIVKSRRTLKGEVALVTGAANGAGECVAKRLAALGAVTVLWDVDEASLRRVVNEIRHSGGRAFGHVIDVSDSDAVACASKTIAKDAGGEVTILVNNAGVASVRSLLDLSDAQIKRTFGVNTMAHFWTTRAFLPAMLAPGGHGHIVTVASVLGRMGVPNLTDYCASKAAVCLFHESLALELSMQDKLRTSVHMTLVCPATMRTRMFEGVAEVPFFKSLDPSDVADAITDAVLTGHTGTLALPLQFYTLPLYMGLPLGIKAFLSKMFKIDRSLANVKGTNSEGQK* # ORIGINAL: g9216.t1 original gene structure, not modified by PASA NODE_2631_length_5602_cov_41.827 AUGUSTUS gene 182 1078 . - . ID=g9216;Name=g9216.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS mRNA 182 1078 . - . ID=g9216.t1;Parent=g9216;Name=g9216.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 394 1078 . - . ID=g9216.t1.exon1;Parent=g9216.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 394 1078 . - 0 ID=cds.g9216.t1;Parent=g9216.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS exon 182 282 . - . ID=g9216.t1.exon2;Parent=g9216.t1 NODE_2631_length_5602_cov_41.827 AUGUSTUS CDS 182 282 . - 2 ID=cds.g9216.t1;Parent=g9216.t1 #PROT g9216.t1 g9216 MTMNLKDGVMSVLGTMSPPVDDIVVRMELVTTFNSPKAWQFTDTFTREPGYDISEAQLQAKLCAYVPVTNYTVDIALDPKFFYTATSALIVESSVHIHTTVPGQKAQVECTGVRQGFSIALYLNTGAANTAPAAVIEDIIFIGCSIAGIFGEGEWGAITVRQCMFTECGDPLDTGTTSAAISISLDGSTGTDLAIEDSLFLLNMLKSILIIGGEQGVSTLSINGCSFDGRSGVIGRALDTENASGDMSHELMLGAYDSETT* # ORIGINAL: g3037.t1 original gene structure, not modified by PASA NODE_10099_length_314_cov_30.9331_potentialcontaminant AUGUSTUS gene 1 299 . - . ID=g3037;Name=g3037.t1 NODE_10099_length_314_cov_30.9331_potentialcontaminant AUGUSTUS mRNA 1 299 . - . ID=g3037.t1;Parent=g3037;Name=g3037.t1 NODE_10099_length_314_cov_30.9331_potentialcontaminant AUGUSTUS exon 1 299 . - . ID=g3037.t1.exon1;Parent=g3037.t1 NODE_10099_length_314_cov_30.9331_potentialcontaminant AUGUSTUS CDS 1 299 . - 0 ID=cds.g3037.t1;Parent=g3037.t1 #PROT g3037.t1 g3037 MCGGLVAFLGTQGRMRCSLLDAALPSSGYAFLFTVDVATASAGISADDTVAGAFRVISVASNGRPDVVKFAFSPRVNVSLDASVALALNGPDTDGDMMA # ORIGINAL: g1014.t1 original gene structure, not modified by PASA NODE_2668_length_5500_cov_43.2096 AUGUSTUS gene 667 1335 . - . ID=g1014;Name=g1014.t1 NODE_2668_length_5500_cov_43.2096 AUGUSTUS mRNA 667 1335 . - . ID=g1014.t1;Parent=g1014;Name=g1014.t1 NODE_2668_length_5500_cov_43.2096 AUGUSTUS exon 667 1335 . - . ID=g1014.t1.exon1;Parent=g1014.t1 NODE_2668_length_5500_cov_43.2096 AUGUSTUS CDS 667 1335 . - 0 ID=cds.g1014.t1;Parent=g1014.t1 #PROT g1014.t1 g1014 MTGRKRNADTELGGDSKRQAPKESPTDAIDAAGAAGTDGAKKKDKASEKREERKRRRAEENKLKPPKELPETFALLEGSGDVRKLASEYLRDWKHDRAGWRFQKVRQVYLLKHMYDPGVVDKVDFGILADYLEGLKGAARQATYDEAKAKVEVLEEETARDASEAESDAARDHSDGQDNSDKDAEKDADAEERRKQRAELDKQRLLRRIQLKRARKIMHALG* # PASA_UPDATE: g1015.t1, single gene model update, valid-1, status:[pasa:asmbl_4762,status:12], valid-1 NODE_2668_length_5500_cov_43.2096 . gene 1850 3860 . + . ID=g1015;Name=g1015.t1 NODE_2668_length_5500_cov_43.2096 . mRNA 1850 3860 . + . ID=g1015.t1;Parent=g1015;Name=g1015.t1 NODE_2668_length_5500_cov_43.2096 . exon 1850 2542 . + . ID=g1015.t1.exon1;Parent=g1015.t1 NODE_2668_length_5500_cov_43.2096 . CDS 1850 2542 . + 0 ID=cds.g1015.t1;Parent=g1015.t1 NODE_2668_length_5500_cov_43.2096 . exon 2704 3860 . + . ID=g1015.t1.exon2;Parent=g1015.t1 NODE_2668_length_5500_cov_43.2096 . CDS 2704 3816 . + 0 ID=cds.g1015.t1;Parent=g1015.t1 NODE_2668_length_5500_cov_43.2096 . three_prime_UTR 3817 3860 . + . ID=g1015.t1.utr3p1;Parent=g1015.t1 #PROT g1015.t1 g1015 MCASFSALPPELVLAHVVPYLGSAHIAVLAKVNRTIRAHLWRVRLLYLWPRLLNKYLLDPAFRSEFASFLPVDRLCLSIEAPTTGAVETPLTDLSPFAGAHTANLWNPGLPGPSIGTADLSYLNGVHTVALRLDMQVTPDIDLRSLARAHSLTLSVSGDVDLHPVADVPCLNISCSSRSATLSSLRGCRRPLPVHVTLQTVGREHPSADILSPLACAGAETVRSVAFPACSGLVDFSALSHLHTAVLGHHDAIALPDALGRVHTLVLNGWKRLRDVSAAHHVHTLVAAASPLCNLQPLSRVHTLHCSLADGTDISPLRSAHTLHLTVSEGGEVHGMAALGRVHTLHFAGDVVDRAEYLALSHVCDLTLHRVHDIVKVSHLRDVHRLSLIGCDGVADVAALGRMYSLKVNFCRRLSDVSALGHVHTLDLGHCESVVDVSALGHVHTLNLARCSRVRDASRLGGVYNLNLSSTSVCDVSALGHVRILTLTNCLVTDVCALGSVHQLNVSFCKKLTDCSALGRVHTLSLAGSPVVDVSCLGGVHTLNIACCPVVDVRALGGVRVLTVEGCRDIDDFSALANVPKLHPPWVLERGSALVSSLLLD* # PASA_UPDATE: g1016.t1, single gene model update, valid-1, status:[pasa:asmbl_4761,status:12], valid-1 NODE_2668_length_5500_cov_43.2096 . gene 4570 5304 . - . ID=g1016;Name=g1016.t1 NODE_2668_length_5500_cov_43.2096 . mRNA 4570 5304 . - . ID=g1016.t1;Parent=g1016;Name=g1016.t1 NODE_2668_length_5500_cov_43.2096 . five_prime_UTR 5297 5304 . - . ID=g1016.t1.utr5p1;Parent=g1016.t1 NODE_2668_length_5500_cov_43.2096 . exon 4850 5304 . - . ID=g1016.t1.exon1;Parent=g1016.t1 NODE_2668_length_5500_cov_43.2096 . CDS 4850 5296 . - 0 ID=cds.g1016.t1;Parent=g1016.t1 NODE_2668_length_5500_cov_43.2096 . exon 4570 4698 . - . ID=g1016.t1.exon2;Parent=g1016.t1 NODE_2668_length_5500_cov_43.2096 . CDS 4570 4698 . - 0 ID=cds.g1016.t1;Parent=g1016.t1 #PROT g1016.t1 g1016 MVTVNIAGTPDMPATQVVSALQFHAETASELAANFAGADGASLSSINAIAAPVGSEAVVAEALVEGSTVGGQIVAPQTSPAGSGVGAEGASSSGGAAVTAGAAAGIAVGCAVGCAAVAAAVGYKVAENRAATGRNSFGRADSQELDLYKRDEQSNADSAQKSRIPKGGVDVYDYDAKSGRHKSLTARGIIS* # PASA_UPDATE: g2005.t1, single gene model update, valid-1, status:[pasa:asmbl_4736,status:12], valid-1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . gene 27022 28685 . - . ID=g2005;Name=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . mRNA 27022 28685 . - . ID=g2005.t1;Parent=g2005;Name=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . five_prime_UTR 28532 28685 . - . ID=g2005.t1.utr5p1;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . five_prime_UTR 28187 28264 . - . ID=g2005.t1.utr5p2;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 28532 28685 . - . ID=g2005.t1.exon1;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 28089 28264 . - . ID=g2005.t1.exon2;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 28089 28186 . - 0 ID=cds.g2005.t1;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 27771 27887 . - . ID=g2005.t1.exon3;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 27771 27887 . - 1 ID=cds.g2005.t1;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 27022 27496 . - . ID=g2005.t1.exon4;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 27250 27496 . - 1 ID=cds.g2005.t1;Parent=g2005.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . three_prime_UTR 27022 27249 . - . ID=g2005.t1.utr3p1;Parent=g2005.t1 #PROT g2005.t1 g2005 MFEHMKNYDALLGRVNHVLADNGLLFVHIFTHRELPYHFEAGSWMADTFFSGGTMPSDTLLYRFQRDLVIERHWRLDGRHYAKTCEAWLQRLDANYSRTIDIFSRAPKGSNGGSTPLATFVQWRLFFLACAECFAYGGGQEWIVSHYLFSKRR* # ORIGINAL: g1999.t1 original gene structure, not modified by PASA NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS gene 1031 7120 . - . ID=g1999;Name=g1999.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS mRNA 1031 7120 . - . ID=g1999.t1;Parent=g1999;Name=g1999.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 1031 7120 . - . ID=g1999.t1.exon1;Parent=g1999.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 1031 7120 . - 0 ID=cds.g1999.t1;Parent=g1999.t1 #PROT g1999.t1 g1999 MHLRMTTLVSLCDEEVRSASLRREVTMLERAIRSKHGTVYGSAEVDTARRIERMMSDADAIAQDRKRIEDNWKRRRAENEKTLLLLEDLKAMLAKTTLTSTETPTTAKATTITQATTTVTTTGHSESPLSKRLSFPDVNQDEDASEDDGDAGLEIQASEIRRHDGGIAAVKDSSAACTDTAPTDDTTTSEASTRRHSSDGSCEHVRASDTQADLHHDYAVAQTHTASHNHVMGQPEEGGLGIASDSDGESEYSEGTTVSSSTDDAVHSETGRQGQPRRPSPGKPSPRKPASEDAHIFLEEHNRYPFAADSAFGASLVDRYSNIQLRGLWANDDDWRGSTASIDSFDEAAYAIASDATAESLRVEGEQPTAGGDEVPPLVGVGRARGPEALALMVNNLIAALSCTETAAGEGDSHVDASTRAVAAPEDSDTDQGSALLRGDTEAGKGRKRAKNSHTHGGDTHSAHPSAERNGSLVGDEENGLVILHAVGASQLSDHGHEEHTNDWKAHPDETLHSGGASARHTQSDVVRAMASAAEHVLVSAELSQSAAPIDKPVTFSNRMDGVRAGANNQEHTHFNPDVQHTMHEDRVFDVINAFNTGDAGFDTQGTPEQTHGEDTESSQGHHTATSLEFVEGDPAHDSEFEIRALSVPIGVRAGSSAFYAVDDVHWSQAPEMAGEVVRATKSVVLPWDRQTNAVDAKRSAIAVEVVECAREKGAVDVVPKASVSPRHSVEVVAASPSIAVERKTAVDVTKAYRHVGIAPRHGVAVVTSAPSVPVVTTREKVDVTSSPAKIDVIQRPAREVVDVFTSDHHHATRQSQNERERQLLGECGRVKPMHSVWCTRICDNMHSMRGSPTSDTERQSDEKKRLCGLDDDGQSEVGAQLETSLLSTFERDMKYAGVLISVSPLSTHAPPTGKGRRLHAMPLMDGERHVDGEGEPLCSAVPHHLEDEGSHQYEMHEEIALSAQSALPSRLRYTPTADHEYADAKVDSTHTGLTATDKRVLAGDRDDAASSVTTKDTQSIDSIDEVHHMLQISALRERADGASPPRRSIGSDIRRKEYPVTHDTGHAIGRIDMEGERHTSMATYECARAVVSPEHGMDSVSQTRGVVGAQSVCAGAGAEGSHTPDICVADVGRASGPWVAVTAEQDAETIEQGVRNSVTKDARSQDTHANGTEAHRVRVSDDASGNVFKPPSPSGVDAEKRRRSLIDDPHIQNGSVVDNVEAVKSVWIAFDSAFRACDGAGVRAALHRLRRLCRVSSMVAESYALAGFTKHLMRAARVVVPKSRESMEAAAAGGEMAVPGAQAAVLSPNPLLLPIFTTLCKLSKIRSSAEDIALEHLFPVFADIGVAYAPHSRTYAVLLFKTLARVAMEDDLARSCARQSKGRLKHGAVRAVKTGDAAVVAAALKFLSRLAMFRVLGRSTRAAIDAACDAAMRHPTHVAMVTSALCLLHFGCRNAQSESDSQHCFARALVVASFSMRAHTNWRIVLLSASIVLDAAAPPVRVASADHVRQAFEASMALARDTDRANAGAAECSLAAAYLMMACLDSEATAGTWPVWQMAKQMSECVQVSLENYPASRIVATVALAMECRHVPVVPQPNPLHSRGGAHQGDSSCSSEGKGTKTVPGELNHHRHTTVSATADGHRDNGDGQDGSADAARCTAHGDDTMACYEAQVRAIHACEECRTNELALAAKALPRLLSLSLPTINATTSFGWMDPTQLRALVGKRKYWRALGMGRYATVYKCNAVDPDEVGAPALAVKRILLRNHDGVFDAGAKAHYVLEAAAMLTITPHENVVRLLGLCVEPDGGAVSILMPYCEGGCLRDAISEGRFSGDERLGIACDIAFAVCHVHANNFLHRDVTSANILIHANGRAVLSDFGLARHVPMLGRQPCGHEVIDESIPLDPTQRTPSPYYCPYRNETRLESMWTDTYSYGIVVAEMMTGTNPVVAAAHIQREAQSRRFRDRKIYDLWRGIAGCIDKRVAWSDASLEVLGRTAVACTKEAPERRPRMMAVAALMHQHRPRPQSAIQ* # ORIGINAL: g2003.t1 original gene structure, not modified by PASA NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS gene 19637 21522 . - . ID=g2003;Name=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS mRNA 19637 21522 . - . ID=g2003.t1;Parent=g2003;Name=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 21264 21522 . - . ID=g2003.t1.exon1;Parent=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 21264 21522 . - 0 ID=cds.g2003.t1;Parent=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 20945 21171 . - . ID=g2003.t1.exon2;Parent=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 20945 21171 . - 2 ID=cds.g2003.t1;Parent=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 19637 20737 . - . ID=g2003.t1.exon3;Parent=g2003.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 19637 20737 . - 0 ID=cds.g2003.t1;Parent=g2003.t1 #PROT g2003.t1 g2003 MSSKSTPHQDNGNCNEKAAKCLLFIAIVAACSVLVVVWMDGVPSPTFLYFVLSGNAVDSPTVYSKRRDVEGSTGNGVDMTVQSRFPGWRLKFGFEMEFDSNETTLATMPMFRHVNTVPSEAYEHVLGLVQSIVAPYEHNSNITHEFHPITRPLRNGHLKVINLRTALWTDPGGGGTWKVSSESVGQWMYSGFEVVSPPLHNSRTAEMVTAALWQSGLSAGYKSATHVHVDGGCLFRGQRKRLKQLAPAYLIVRLILLQERIEPLIRRMFGTRHNNGSLNFFSASIGEVHPRLLKNMAKEVCWHVKRPSRRCRPPRITVAQLESMFDRFLPQELRHVRLRSNMLSIVRVNRTTAAIGAAIGTEGNDANDANATRRWNEADYYVKRAWKYHSLNLSRLLRLSTAFSPTGTVEFRAFDLLPPRTLRLAINMCRAVVAKVWASAHAYDNSWLPSQPELASLRAPFTSSAAGRNGKEMAVDLLPEDPAAVRQMARSLIIWLGLDPFDYFALISEIKQETSVGWWAGSQAGSGA* # ORIGINAL: g2001.t1 original gene structure, not modified by PASA NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS gene 11776 13798 . - . ID=g2001;Name=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS mRNA 11776 13798 . - . ID=g2001.t1;Parent=g2001;Name=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 13427 13798 . - . ID=g2001.t1.exon1;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 13427 13798 . - 0 ID=cds.g2001.t1;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 12860 12992 . - . ID=g2001.t1.exon2;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 12860 12992 . - 0 ID=cds.g2001.t1;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 12422 12552 . - . ID=g2001.t1.exon3;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 12422 12552 . - 2 ID=cds.g2001.t1;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 11776 11997 . - . ID=g2001.t1.exon4;Parent=g2001.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 11776 11997 . - 0 ID=cds.g2001.t1;Parent=g2001.t1 #PROT g2001.t1 g2001 MVGNSKTGDGSQPHYNAIELTMVSDRESNAGLGDAQTAEDNQQIRLTFAGRHVALMRKAWREVKLHYKEHPIAWVALAVFLACGAAYIAALVIFSRQLAVIREGIYIDFDMRTGSLDELDDVDTWLGDLPSTAEDINGNNTPVIGLQISLAKFEPSNSGATVNVVCGFTAPRHSQYVVSEFPPRLNETLALYVVDAFQVYDKNKPLFDFSASIKADEGSLLLYPFDVYTFRADMYPLAGPAGEILLLMAAIVDIKDIGVFSIHATPFGSDVAKFQGIEVRTRQQQ* # PASA_UPDATE: g2004.t1, single gene model update, valid-1, status:[pasa:asmbl_4737,status:12],[pasa:asmbl_4738,status:12], valid-1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . gene 22706 26882 . + . ID=g2004;Name=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . mRNA 22706 26882 . + . ID=g2004.t1;Parent=g2004;Name=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . five_prime_UTR 22706 22732 . + . ID=g2004.t1.utr5p1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 22706 22760 . + . ID=g2004.t1.exon1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 22733 22760 . + 0 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 22870 22974 . + . ID=g2004.t1.exon2;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 22870 22974 . + 2 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 23073 23515 . + . ID=g2004.t1.exon3;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 23073 23515 . + 2 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 23922 24133 . + . ID=g2004.t1.exon4;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 23922 24133 . + 0 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 24393 24715 . + . ID=g2004.t1.exon5;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 24393 24715 . + 1 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 24961 25140 . + . ID=g2004.t1.exon6;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 24961 25140 . + 2 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 25320 26125 . + . ID=g2004.t1.exon7;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 25320 26125 . + 2 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 26296 26882 . + . ID=g2004.t1.exon8;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 26296 26739 . + 0 ID=cds.g2004.t1;Parent=g2004.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . three_prime_UTR 26740 26882 . + . ID=g2004.t1.utr3p1;Parent=g2004.t1 #PROT g2004.t1 g2004 MDVETPPTDATAAEVGSGVVVNGALLDLIEGLFNGNNPVLDAFLRSEMDSESYVDVSLVANLKNVKQITADVAQVVAAMRASRELEVDGDGRRVRHRKCVDSDARGADQTAVASAAILAENAAMGHLTKTLPSSASSLSLGGAGSSRTRNRNRSASASTHQQQHQKQQPQNGMVKNRTTVVLRDVPSTTLPSAIQGLFDNTPLRNAVTDLHFGSGDSWLVVFDTEASAAAALDHVRSCSLAGRPVSAFIRGADSSLAASHSGGSRGVFYPGGGEARVSSSLPPQGFRGGRLNQSCNGSFNAGSHHHGASAGNQSNLGRNARDVQRRGNAPGLPASSSASSAGTWTKQQYSDTHTHQRDVSGRHSAGGYRNDNEAQRMHTSDKLNPGADVDLNATWPPPGMSPQKGTEGQKHSRRTGAAESRTEDVLRRGEEQSDSGRQSRPPSRPVQSSARPVTVADTPSHDTFTNSNAKPMPTTATIHKYSPEELLEIYAKMSLDQEPSSDFYNGEDDGSNCGTGSERDSPEPRSYAQEREAEHATHARTQKKTGTVEGASSSAGVVRGKDVDAGKPRMHKGSRSSSDLLSKSSNRTGVDVPPRPHSQQKMAPVHIVVSGADSAADEDGEDTDDFDGEARVGGGRLVSRPDSRESDSREEGDDEVGPDGKKKRRAGKSRSGSRRHRMKRKPSAAHMDAVKERLLKDQTALNARSPNSRQLSSGLSATFHSGLAATFHGGMAWPSREGATSTREELSGSDDAINKNKNGKSVGDALSGVTASSKDMHTKQGHTQHVPATSAAARGVGHPGRQMPVTGLELFKSAVDGSDPDIYDYDSASSDGGAYEAEDDRLNMTM* # ORIGINAL: g2000.t1 original gene structure, not modified by PASA NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS gene 9291 9623 . - . ID=g2000;Name=g2000.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS mRNA 9291 9623 . - . ID=g2000.t1;Parent=g2000;Name=g2000.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS exon 9291 9623 . - . ID=g2000.t1.exon1;Parent=g2000.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant AUGUSTUS CDS 9291 9623 . - 0 ID=cds.g2000.t1;Parent=g2000.t1 #PROT g2000.t1 g2000 MVIPLASIQSHIRPTDAPLRREVVTAQCGCGMRKRALSFARSMGTPLASIQSRIRPTDAPLRVTAQCGWNAQTGALDESLDNAFGASSTSAAIFFDVASIASASGHDELA* # PASA_UPDATE: g2002.t1, single gene model update, valid-1, status:[pasa:asmbl_4739,status:12], valid-1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . gene 14666 18503 . + . ID=g2002;Name=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . mRNA 14666 18503 . + . ID=g2002.t1;Parent=g2002;Name=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 14666 15142 . + . ID=g2002.t1.exon1;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 14666 15142 . + 0 ID=cds.g2002.t1;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 15437 16080 . + . ID=g2002.t1.exon2;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 15437 16080 . + 0 ID=cds.g2002.t1;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 16230 16598 . + . ID=g2002.t1.exon3;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 16230 16598 . + 1 ID=cds.g2002.t1;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . exon 16804 18503 . + . ID=g2002.t1.exon4;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . CDS 16804 18319 . + 1 ID=cds.g2002.t1;Parent=g2002.t1 NODE_265_length_28715_cov_42.3307_potentialcontaminant . three_prime_UTR 18320 18503 . + . ID=g2002.t1.utr3p1;Parent=g2002.t1 #PROT g2002.t1 g2002 MEWEPVQTQNATQLVMLPIADTDVVMGAADYNGAAGPTQATNVIADDSVRQPAFRSRVPPRPLMDYVALTFNSRDEYDILEEAAVEGTFVRVKELCDKVNGNGGLNLNTCTDKVRAKLDENLEKCVAAAGLTSGSIYMHQAEAIALSLQGRNVQVLTGTASGKTACFLVPAFFELLRGKSTLIVMPRKSLASFLTEKLLPAVKILFQDSDKSNKYPRAVQVDGSTNSAGATVNATAVNAANGQAQSGDAMSEQIRMTLDDPCTARIIVTNPDALQHIILGGTHKDKWRQVLSNVGLIVLDESHMYIDRLGATTGLSVRSIARLLDGRNLRYICCSATGGKTSQHLEALTGETQDSWSCVEKSTAPRGKRYYAVRKAEYAIEDKSQCIGLASTLVAAFVEYGFGCVAFATTRNDSETIVWAARRLLSADLQPVAHDIIHAYRSGYTAARRTTIETEMKNESITAKGIASTSALEVGVDIGELDVVIIVGFPGSWASFRQQAGRAGRRSKTSLVIFIPTPGNDVDARIAQSPNVILNCHDEDCIINGREYRSHLPATLFQAALVKPLSRKTDGPKFGNAAFDEAIKKLLESNHIRESPTCGDTYDAIKLSHEGCELERTEIKVSIRGSDGREVARDEVTVRVPANIHVGSILMCEGRPYKVVDVPGKPGPDTVAEAVFLDDGSTDMTKETTPVPLHTYTYWKSTCAIQMHGQRSFASTAMASAESPAWEAGTFIGTACVEHTYQKINPTTSDKLNVITYPPDDGSARKDANEGAGPPELPAESEDLGFILGLWLGAKGAQLNGGRDLLQAAHTLSHLLSDLIRIGDHTGVRGGAIQGFRMLSCASLPKTLCKTDKEVQNFLEANWSLMNASCTLASRDAGSGTQGTQDPEPGIVLLFSLGKDGTEIDADQAHKLIADALQAARDRLLGCVAADCQDGCFGCTLKSAGMCRGCPVRFYEKKSGIGSKVSPNALSKKAALRMIDSVELAATGTDAAASSSPMDTA* # ORIGINAL: g4291.t1 original gene structure, not modified by PASA NODE_1294_length_12349_cov_39.405 AUGUSTUS gene 5655 8618 . + . ID=g4291;Name=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS mRNA 5655 8618 . + . ID=g4291.t1;Parent=g4291;Name=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 5655 5717 . + . ID=g4291.t1.exon1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 5655 5717 . + 0 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 5885 5948 . + . ID=g4291.t1.exon2;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 5885 5948 . + 0 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 6059 6142 . + . ID=g4291.t1.exon3;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 6059 6142 . + 2 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 6382 6443 . + . ID=g4291.t1.exon4;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 6382 6443 . + 2 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 6601 6704 . + . ID=g4291.t1.exon5;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 6601 6704 . + 0 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 7196 7258 . + . ID=g4291.t1.exon6;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 7196 7258 . + 1 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 7473 7501 . + . ID=g4291.t1.exon7;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 7473 7501 . + 1 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 7649 7914 . + . ID=g4291.t1.exon8;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 7649 7914 . + 2 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 8123 8212 . + . ID=g4291.t1.exon9;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 8123 8212 . + 0 ID=cds.g4291.t1;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 8499 8618 . + . ID=g4291.t1.exon10;Parent=g4291.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 8499 8618 . + 0 ID=cds.g4291.t1;Parent=g4291.t1 #PROT g4291.t1 g4291 MEATVISGVESAAAVGCPSETELAGRAKACEGCPGRDLCQSQSGVDPDQEQINIRMRAVKRKVLILSGKGGVGKSSVAATLSMALARSGRKVGVVDLDICGPSIPRLMKVEGQQVTSSEYGWIPCKSPHGDIKVLSVGSLLPDQDNAVIWRGPRKTALIKRFLKDVLWGRLDFLVFDTPPGTSDEHLTVVKALKDASPDGAVIVATPADAALITVRKEITFCIKMGVKIIGVVENMSGFACPCCKEVYDVFSSGGGKKLAEEFGLKYLGKIPLDNTLSVCCEAGDSVFERDPTSPAAVALTEFAASVVSALDSA* # PASA_UPDATE: g4290.t1, single gene model update, valid-1, status:[pasa:asmbl_1115,status:12], valid-1 NODE_1294_length_12349_cov_39.405 . gene 4487 5424 . + . ID=g4290;Name=g4290.t1 NODE_1294_length_12349_cov_39.405 . mRNA 4487 5424 . + . ID=g4290.t1;Parent=g4290;Name=g4290.t1 NODE_1294_length_12349_cov_39.405 . five_prime_UTR 4487 4506 . + . ID=g4290.t1.utr5p1;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . exon 4487 4653 . + . ID=g4290.t1.exon1;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . CDS 4507 4653 . + 0 ID=cds.g4290.t1;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . exon 4771 4868 . + . ID=g4290.t1.exon2;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . CDS 4771 4868 . + 0 ID=cds.g4290.t1;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . exon 4951 5424 . + . ID=g4290.t1.exon3;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . CDS 4951 5092 . + 1 ID=cds.g4290.t1;Parent=g4290.t1 NODE_1294_length_12349_cov_39.405 . three_prime_UTR 5093 5424 . + . ID=g4290.t1.utr3p1;Parent=g4290.t1 #PROT g4290.t1 g4290 MDAPSRPDFPVNTVQFAAVVDGTHTDFVISSFSNRIFVAITQYEKLGTLIHASKDVKVDLETPPSYTVRTLLGKRDEPLLLVYARQLIEIISSATDKPLLLSIALKPETVTPAQMQAVLGLLKQNKVW* # ORIGINAL: g4292.t1 original gene structure, not modified by PASA NODE_1294_length_12349_cov_39.405 AUGUSTUS gene 9644 12124 . - . ID=g4292;Name=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS mRNA 9644 12124 . - . ID=g4292.t1;Parent=g4292;Name=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 12034 12124 . - . ID=g4292.t1.exon1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 12034 12124 . - 0 ID=cds.g4292.t1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 11750 11837 . - . ID=g4292.t1.exon2;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 11750 11837 . - 2 ID=cds.g4292.t1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 11383 11471 . - . ID=g4292.t1.exon3;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 11383 11471 . - 1 ID=cds.g4292.t1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 11023 11114 . - . ID=g4292.t1.exon4;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 11023 11114 . - 2 ID=cds.g4292.t1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 10110 10752 . - . ID=g4292.t1.exon5;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 10110 10752 . - 0 ID=cds.g4292.t1;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS exon 9644 9795 . - . ID=g4292.t1.exon6;Parent=g4292.t1 NODE_1294_length_12349_cov_39.405 AUGUSTUS CDS 9644 9795 . - 2 ID=cds.g4292.t1;Parent=g4292.t1 #PROT g4292.t1 g4292 MLLDNNGSVKLIDFGLSNFMAHGHRLDTCCGSPMYASPEMYRATPYDGPEVDVWSMGVILYAMLDGNYPFQQPEDVIKGRMKLPDRFSPLCRDLITRMLNVDARQRISLDGIFAHPWVSKYGEPLERTSSRSNTPAVDLEPEILTMMVDAGFAKEVIVASIQGRLYNQVTATYTFLEEKLRLTIAKRRIKEAQVTAVAEAAKATAATTAATVAGTTDSPSRPANGCPVKHGDAANNNNNNNKQLVGKCPVTGQTAGAAGASGAASGGCVMGGGQGGKAEYTCPHCGSVDYALMAADARIVALLEALLPEVAKAYSEGKTSRPSSQLGITDAHKAVTYNAAVTTVATASGCPHASRAQFEEQVLGIMSMAKKFIDKQHPNGHSNH* # PASA_UPDATE: g4289.t1, single gene model update, valid-1, status:[pasa:asmbl_1114,status:12], valid-1 NODE_1294_length_12349_cov_39.405 . gene 170 3786 . - . ID=g4289;Name=g4289.t1 NODE_1294_length_12349_cov_39.405 . mRNA 170 3786 . - . ID=g4289.t1;Parent=g4289;Name=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 3654 3786 . - . ID=g4289.t1.exon1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 3654 3786 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 3254 3372 . - . ID=g4289.t1.exon2;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 3254 3372 . - 2 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 2989 3091 . - . ID=g4289.t1.exon3;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 2989 3091 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 2634 2770 . - . ID=g4289.t1.exon4;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 2634 2770 . - 2 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 2205 2318 . - . ID=g4289.t1.exon5;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 2205 2318 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 1895 1987 . - . ID=g4289.t1.exon6;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 1895 1987 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 1564 1696 . - . ID=g4289.t1.exon7;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 1564 1696 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 1297 1400 . - . ID=g4289.t1.exon8;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 1297 1400 . - 2 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 748 995 . - . ID=g4289.t1.exon9;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 748 995 . - 0 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 526 590 . - . ID=g4289.t1.exon10;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 526 590 . - 1 ID=cds.g4289.t1;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . exon 170 342 . - . ID=g4289.t1.exon11;Parent=g4289.t1 NODE_1294_length_12349_cov_39.405 . CDS 170 342 . - 2 ID=cds.g4289.t1;Parent=g4289.t1 #PROT g4289.t1 g4289 MTDKLRSALNFVGGGGGGGPENDFVGKTVEIGGRRVKVRKLIAQGGFSFVFLAADQNNQIYALKRLIVNEKERFQAVKDEIAVMKKLNGHENIVDFYDSAYGNGNSGTEVLILMEFCPGGMIVDTINRGKSFSKWQVLRIFTQAVRAVQRMHVMNPPMIHRDLKAENLLVTTRGTIKLCDFGSCTTKVLAPQTQREISMAEEEIQLNTTPQYRSPEMVDVYSKKPIGTKSDIWALGCILYKLCYVMTPFEDGSKLSIMNAKLKLPESSNYVAFHSLIKDMLSLEPDARPTADDILERLEGLAREFGPDPRKVEREGADKGLLDCSDADLALASGAVGSSGGVSSSSSSSRGEGPSGAGEASSGGSLLGRLSNMKDNLVTNVREKSTKVIRSVVAGETNKHGEDFEIDMSYITSRVVAMSYPAEGMEAMYRNNIDHVRSYLEQKHPAHYAVFNLTDRAYNHQKLNNKASPRRRA* # PASA_UPDATE: g11128.t1, single gene model update, valid-1, status:[pasa:asmbl_2539,status:3], valid-1 NODE_1758_length_9356_cov_42.8066 . gene 3635 7870 . + . ID=g11128;Name=g11128.t1 NODE_1758_length_9356_cov_42.8066 . mRNA 3635 7870 . + . ID=g11128.t1;Parent=g11128;Name=g11128.t1 NODE_1758_length_9356_cov_42.8066 . five_prime_UTR 3635 3722 . + . ID=g11128.t1.utr5p1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 3635 3773 . + . ID=g11128.t1.exon1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 3723 3773 . + 0 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 3900 4317 . + . ID=g11128.t1.exon2;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 3900 4317 . + 0 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 4468 4679 . + . ID=g11128.t1.exon3;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 4468 4679 . + 2 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 4856 5447 . + . ID=g11128.t1.exon4;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 4856 5447 . + 0 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 5594 5626 . + . ID=g11128.t1.exon5;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 5594 5626 . + 2 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 5739 6475 . + . ID=g11128.t1.exon6;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 5739 6475 . + 2 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 6613 6656 . + . ID=g11128.t1.exon7;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 6613 6656 . + 0 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 6830 7241 . + . ID=g11128.t1.exon8;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 6830 7241 . + 1 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 7417 7513 . + . ID=g11128.t1.exon9;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 7417 7513 . + 0 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . exon 7758 7870 . + . ID=g11128.t1.exon10;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . CDS 7758 7807 . + 2 ID=cds.g11128.t1;Parent=g11128.t1 NODE_1758_length_9356_cov_42.8066 . three_prime_UTR 7808 7870 . + . ID=g11128.t1.utr3p1;Parent=g11128.t1 #PROT g11128.t1 g11128 MATIEKATRRTLKPTTKGGTLKSTTPADPVEDHECCVCLKTMRLSIADMNKHTNMCLEKASGVREVDLDATADSDASSAKGQSDASEEFAANFSKTLKKATAKTSLHRKPKGSGNGSNKENQAADDANANDSVGRGPLGGVVACVEVRTVDTSALKAVCARLEQLGARTVAKVTGDCTHLIFKDGRKSVWDAAVARQPPVAIVSVVWVEECHKEQTRLPEADYQPETESRGHAKRRVKSMEPDTADAMLSRSKKRPISISPKETAPVVVLCPETQLPYSPPGAPADPAMSYGDTQTAVTTLAGMCLLKSTVEEERSARSAVVGGGKKAFVPDSPVREADISTDNATALGGLMSPAGGDEVSVTPVKTGDTRARVVSSSRTYGRRSAVGAVSPRADRSAGKVWDEIVNSARKLTPASSGNTNESSGSPKEPTKIHKGASVAMPTALSPKSSSAPTVTDGEQSTVASKECEPNEVPNAAAKERAPKRKLLPATDSSLFEGEGEEESMPAKRRAVLPKKKSGVATTEAVVAPPTNISTRDIFAEDPTTERKTGAIATTETVVNVAEPHAIETKTDSGVTAKKEAASKPMPRRTKKGKVASSTNEGEGEDTHPAGKGNDGQTEMLTLTVDARAPAPVDVLDRPVTAADKATPTVTPSSKRKLDTEAKAKAGAAGKKHLSKKRRTEVEELPPVVITNVNSKLRDQLETAIAFLGRTATEHSDAFPDDTTHVICGDKRRTLAVLHAMARGCWMLSPSWALKSMEAGKWLDEEPYEIGEIFPATSVARLERVVAHINGGGHCDGAVNGGFLAACGPVFIGGGTRIDRKELKRLVLACGGSVSEIFKRSYVCIGTPPTDVKSDVRVATENWLLDSIMEHKMLPLSNYAH* # ORIGINAL: g11127.t1 original gene structure, not modified by PASA NODE_1758_length_9356_cov_42.8066 AUGUSTUS gene 1123 2750 . - . ID=g11127;Name=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS mRNA 1123 2750 . - . ID=g11127.t1;Parent=g11127;Name=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 2638 2750 . - . ID=g11127.t1.exon1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 2638 2750 . - 0 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 2460 2559 . - . ID=g11127.t1.exon2;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 2460 2559 . - 1 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 2193 2312 . - . ID=g11127.t1.exon3;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 2193 2312 . - 0 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 1966 2054 . - . ID=g11127.t1.exon4;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 1966 2054 . - 0 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 1502 1853 . - . ID=g11127.t1.exon5;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 1502 1853 . - 1 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 1310 1385 . - . ID=g11127.t1.exon6;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 1310 1385 . - 0 ID=cds.g11127.t1;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 1123 1211 . - . ID=g11127.t1.exon7;Parent=g11127.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 1123 1211 . - 2 ID=cds.g11127.t1;Parent=g11127.t1 #PROT g11127.t1 g11127 MSALELFDEFMKRHVSIAYEAYLDNKKDMESENAGAVVRSARRRSEWSKYMAFLQSRVLLRATTCVQIASKLESVDLISSKLASSRTDAAFDMDTIERILQFRFNRDTISRSELRVLATLKYSLTVVSPLSALESLIAFVRHKLLKEYDCPEAALASSPSPLAKHLAGADTAYGPIKTMDPGRQTEKGAILAQAKAGVALPVASGDEDNGIDLLLKRMDVACIDILHRLCYQYLEHSYYLAFQDEDIAALVRQPENHKVLAAALIATASFSTMSAAFQTIVRIVSERVEQRKNRIADLAYKLLTSVLGSGSS* # ORIGINAL: g11126.t1 original gene structure, not modified by PASA NODE_1758_length_9356_cov_42.8066 AUGUSTUS gene 121 666 . + . ID=g11126;Name=g11126.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS mRNA 121 666 . + . ID=g11126.t1;Parent=g11126;Name=g11126.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 121 423 . + . ID=g11126.t1.exon1;Parent=g11126.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 121 423 . + 0 ID=cds.g11126.t1;Parent=g11126.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 616 666 . + . ID=g11126.t1.exon2;Parent=g11126.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 616 666 . + 0 ID=cds.g11126.t1;Parent=g11126.t1 #PROT g11126.t1 g11126 GYGAPQPMGYPQQQPYYPPQQQYPPPQQYPPQQAYPPQQQMYPPQQQMYPPQQQFYQPPPPPVYMAPQVVVAPPVFIPPPAPGIVFVEPAGIFNPHIDIHLGGRRHHHHHHHGGFFF* # ORIGINAL: g11129.t1 original gene structure, not modified by PASA NODE_1758_length_9356_cov_42.8066 AUGUSTUS gene 8432 8949 . + . ID=g11129;Name=g11129.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS mRNA 8432 8949 . + . ID=g11129.t1;Parent=g11129;Name=g11129.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 8432 8594 . + . ID=g11129.t1.exon1;Parent=g11129.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 8432 8594 . + 0 ID=cds.g11129.t1;Parent=g11129.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS exon 8849 8949 . + . ID=g11129.t1.exon2;Parent=g11129.t1 NODE_1758_length_9356_cov_42.8066 AUGUSTUS CDS 8849 8949 . + 2 ID=cds.g11129.t1;Parent=g11129.t1 #PROT g11129.t1 g11129 MASSKDYDYEGGSGEESDGNAFDDDEDELHEDVAHEQRLKAAVHYTVGRICDDAGEDTQMAFSREFIAMLAETTWKKFSECGHSASA* # ORIGINAL: g11715.t1 original gene structure, not modified by PASA NODE_4026_length_2320_cov_29.9657 AUGUSTUS gene 55 1829 . + . ID=g11715;Name=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS mRNA 55 1829 . + . ID=g11715.t1;Parent=g11715;Name=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS exon 55 162 . + . ID=g11715.t1.exon1;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS CDS 55 162 . + 0 ID=cds.g11715.t1;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS exon 343 495 . + . ID=g11715.t1.exon2;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS CDS 343 495 . + 0 ID=cds.g11715.t1;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS exon 1076 1182 . + . ID=g11715.t1.exon3;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS CDS 1076 1182 . + 0 ID=cds.g11715.t1;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS exon 1448 1571 . + . ID=g11715.t1.exon4;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS CDS 1448 1571 . + 1 ID=cds.g11715.t1;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS exon 1770 1829 . + . ID=g11715.t1.exon5;Parent=g11715.t1 NODE_4026_length_2320_cov_29.9657 AUGUSTUS CDS 1770 1829 . + 0 ID=cds.g11715.t1;Parent=g11715.t1 #PROT g11715.t1 g11715 IGTSILRLCLRELFEYGVMQTDPNWANFLYDKNTDKIALLDFGASRDFPKRFTDPYIKAIYGASRGDRPTCINASIEMGFLTGDEPKVMMDAHADAMALLGRPFAQEAPFDFGSQDITSKVQGLLPVLLRHRLTPPPEESYSLHRKLSGAFLLCAKLRSVVPCKGLFDKIYRKYEFADATLKH* # ORIGINAL: g5988.t1 original gene structure, not modified by PASA NODE_10411_length_307_cov_131.978 AUGUSTUS gene 1 307 . - . ID=g5988;Name=g5988.t1 NODE_10411_length_307_cov_131.978 AUGUSTUS mRNA 1 307 . - . ID=g5988.t1;Parent=g5988;Name=g5988.t1 NODE_10411_length_307_cov_131.978 AUGUSTUS exon 1 307 . - . ID=g5988.t1.exon1;Parent=g5988.t1 NODE_10411_length_307_cov_131.978 AUGUSTUS CDS 1 307 . - 1 ID=cds.g5988.t1;Parent=g5988.t1 #PROT g5988.t1 g5988 LSLTDIDGPSIDGAEVRITNALDGTDEILSANTTGTALTALYDSATFTLTISGNDSISSYRAVLATVKYNNVRDEPSPVTRIVTFRVSDTLLWSDSRTSLVT # ORIGINAL: g6285.t1 original gene structure, not modified by PASA NODE_1806_length_9148_cov_28.4084 AUGUSTUS gene 1 901 . - . ID=g6285;Name=g6285.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS mRNA 1 901 . - . ID=g6285.t1;Parent=g6285;Name=g6285.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 503 901 . - . ID=g6285.t1.exon1;Parent=g6285.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 503 901 . - 0 ID=cds.g6285.t1;Parent=g6285.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 1 326 . - . ID=g6285.t1.exon2;Parent=g6285.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 1 326 . - 0 ID=cds.g6285.t1;Parent=g6285.t1 #PROT g6285.t1 g6285 MARLRAVLDRIRAAGLTLRGVKCNFAQSELPFLGYVVDSEGLAQPRKNYESSTHMPAPQNASDVRSFLGMTQYNRKFIEKYAQIATPLTELTKKNTTWTWTPREQLAFDRLKHALTSAPVLAFPSFDPARKFRIAKEWRLKTGLTTEIEEAPIDFNELSAVGRKGALEAYTEIWSKSITGGTATLRAEKAEAVKRYVDRMIKERGPASYDPLALNKSPDFVQEIEKEWSDIVGVRTYGDFI # ORIGINAL: g6286.t1 original gene structure, not modified by PASA NODE_1806_length_9148_cov_28.4084 AUGUSTUS gene 950 2019 . - . ID=g6286;Name=g6286.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS mRNA 950 2019 . - . ID=g6286.t1;Parent=g6286;Name=g6286.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 1386 2019 . - . ID=g6286.t1.exon1;Parent=g6286.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 1386 2019 . - 0 ID=cds.g6286.t1;Parent=g6286.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 950 1278 . - . ID=g6286.t1.exon2;Parent=g6286.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 950 1278 . - 2 ID=cds.g6286.t1;Parent=g6286.t1 #PROT g6286.t1 g6286 MVHDKTYPIVAFSHPHVAATLGLHVATGPADVRDGTTHIVVLNPSPKDVLLRADTPVGRFYRPPTDIVTTICEDPAAPVSPTADAADISPTQDKNSTSPPPGPPTPRDKVETPLPPPSDTPPPQIRRPAVYNPALDPERYELDPLTLLPHGVTLDPAVPERLAANEAQELRWTLQEYVDTFVPKSGKPGRTDITTFKIDTGDNIPVSVPPRLMADKPDGSLRFCIVYRKLNNITVGDAYPLPRIDDMLASLAAMRFFSTLDLASGYWQIALDPASKVKTAFRTHDGHYQWTVMPFGLKNAPAAFQRCMDLVLTGLTWQSC* # ORIGINAL: g6287.t1 original gene structure, not modified by PASA NODE_1806_length_9148_cov_28.4084 AUGUSTUS gene 2289 4438 . - . ID=g6287;Name=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS mRNA 2289 4438 . - . ID=g6287.t1;Parent=g6287;Name=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 4204 4438 . - . ID=g6287.t1.exon1;Parent=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 4204 4438 . - 0 ID=cds.g6287.t1;Parent=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 3065 4115 . - . ID=g6287.t1.exon2;Parent=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 3065 4115 . - 2 ID=cds.g6287.t1;Parent=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 2289 2745 . - . ID=g6287.t1.exon3;Parent=g6287.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 2289 2745 . - 1 ID=cds.g6287.t1;Parent=g6287.t1 #PROT g6287.t1 g6287 MDPNNLNGQAPDNVDEAGPAPEPIVPPAPVRAPPPAAPNVQQVPGMDIAAHINAQVNAALQAALANILSATGSSCCRRLPLVPAAAAPAAQLPPHGVGDLRMDLRAYQDVIGKFHGDKAKDNHMDIDDYLSRLEAVTQDLPLQTRDITRLRLLQCLLKDGARSTLDRLLTQPLNLTYTTAADVLYRFYRPMNRVQELKDTFYGTPQGQQEATHDYCRRKQTEAQRIQLADPMHTISDDDLRTTFIRGLFNKQIPFLVLNLRKNNLMNNRHRGPDGHQDPTNSAWLFNMAIENELDFQSLQEATRPSTAPPATGTGQHKTSKTHTQGTREVNSLLPMLVATVLQIRRKIRPGRLLNKLLCRTLATTALPTTPDATGSTPVSATTHLTTPWLNVLDARFSPSPPQTSITLPFASASRTFKAASAAVTPHTRQSLQQRRVTFSAPPRHRKPAIFRDPPAADPSFLLHDGQVDTPISDTIPTVNSLDAYNVSTYGRNDIDVDAHDQKLTLLYALATHTPHLSDFCAAIYAVTRMTELPKIDDDSLHNGAPLAHDIQDGSRPRTSTTNPPESRAPATTPPPQPVP* # ORIGINAL: g6288.t1 original gene structure, not modified by PASA NODE_1806_length_9148_cov_28.4084 AUGUSTUS gene 8489 9148 . + . ID=g6288;Name=g6288.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS mRNA 8489 9148 . + . ID=g6288.t1;Parent=g6288;Name=g6288.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS exon 8489 9148 . + . ID=g6288.t1.exon1;Parent=g6288.t1 NODE_1806_length_9148_cov_28.4084 AUGUSTUS CDS 8489 9148 . + 0 ID=cds.g6288.t1;Parent=g6288.t1 #PROT g6288.t1 g6288 MASVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNGVLHSHLRNMRLYHLWPTYNRMYIEDAEFRNEVKATIPVGRLVLVAVDENLQDLSPLEGVHSALFPTTGGTPIAATDLSPLKGVHTVELEIGWLFPADGLAPLATVPVVRIRCQNGSGLPAFVKAELVNLSYAPIDLHYLVGVPRIKLCGCKTVEDAPITDLSALRQARYVELNDMQALQDLSCL # ORIGINAL: g14.t1 original gene structure, not modified by PASA NODE_2258_length_7032_cov_41.2393 AUGUSTUS gene 4528 5145 . - . ID=g14;Name=g14.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS mRNA 4528 5145 . - . ID=g14.t1;Parent=g14;Name=g14.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 4872 5145 . - . ID=g14.t1.exon1;Parent=g14.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 4872 5145 . - 0 ID=cds.g14.t1;Parent=g14.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 4528 4637 . - . ID=g14.t1.exon2;Parent=g14.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 4528 4637 . - 2 ID=cds.g14.t1;Parent=g14.t1 #PROT g14.t1 g14 MLGHMTAAADSSGSNSSFSADGPVKASDAVGGFSIGVHLMVCDLASESAARPAEEHGRLDRVDAHQKRAFFAEGRGIVHLCVVWRAADVRLGAPGALRSQWKTAESRTSQSRSIGNVFFHWDISTFT* # ORIGINAL: g13.t1 original gene structure, not modified by PASA NODE_2258_length_7032_cov_41.2393 AUGUSTUS gene 1054 3344 . + . ID=g13;Name=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS mRNA 1054 3344 . + . ID=g13.t1;Parent=g13;Name=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 1054 1458 . + . ID=g13.t1.exon1;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 1054 1458 . + 0 ID=cds.g13.t1;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 1732 2491 . + . ID=g13.t1.exon2;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 1732 2491 . + 0 ID=cds.g13.t1;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 2745 2818 . + . ID=g13.t1.exon3;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 2745 2818 . + 2 ID=cds.g13.t1;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS exon 3108 3344 . + . ID=g13.t1.exon4;Parent=g13.t1 NODE_2258_length_7032_cov_41.2393 AUGUSTUS CDS 3108 3344 . + 0 ID=cds.g13.t1;Parent=g13.t1 #PROT g13.t1 g13 MAAEGVTTRHFALSPDAVPPAAPSIEPWFGPVTSHVLPSSLNESASAHCGSHGHHPRVAWSTTVTDNTLSTVGGGTTASSRMVGRLPADATDANIADIPRMHLQSGFSLLFMETMRTFTASSSGCEPEEVSFSWKVLIEYPLPVEIRAVFYTRISHALFPSSLDISVSIADEAESTAICKSSSIPQLSAHTQHDAVPMPVVLECPPGGTVGSRFILRETVKVAFRHDNFYPHFRKPYPACAEDARLFYSIRRFRVLAHPPPLRLYSPCGAETHTTASDGIHRDDDVSTASATCFPNRFGAKNIPADTSNDKHHATEIGSAFVCEDPRKNAVSSVCLPLDEYIDFVSGDGVSRVRVNAWLACGRSPVLRCLVTRVLFDSTRTCNACGIKEFGIESLRLFAQYIHGTLGMCHILTACNGTAIPELCLLADMYDMGELQELAFAVAVGCVDAQNCTAYLEFGVKHRLHRIVALAIECGAWSGLGVNMAAMLCGW* # PASA_UPDATE: g12746.t1, single gene model update, valid-1, status:[pasa:asmbl_8986,status:12], valid-1 NODE_707_length_18816_cov_44.6234 . gene 392 1071 . + . ID=g12746;Name=g12746.t1 NODE_707_length_18816_cov_44.6234 . mRNA 392 1071 . + . ID=g12746.t1;Parent=g12746;Name=g12746.t1 NODE_707_length_18816_cov_44.6234 . exon 392 523 . + . ID=g12746.t1.exon1;Parent=g12746.t1 NODE_707_length_18816_cov_44.6234 . CDS 392 523 . + 0 ID=cds.g12746.t1;Parent=g12746.t1;5_prime_partial=true NODE_707_length_18816_cov_44.6234 . exon 603 1071 . + . ID=g12746.t1.exon2;Parent=g12746.t1 NODE_707_length_18816_cov_44.6234 . CDS 603 917 . + 0 ID=cds.g12746.t1;Parent=g12746.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 918 1071 . + . ID=g12746.t1.utr3p1;Parent=g12746.t1 #PROT g12746.t1 g12746 LIVLLLSFDFWTVKNVSGRLLVGLRWWNKVKDDGTSEWVFESKKGRAVVSPTESRIFWFSLYIFMGLWILFAFTALINGIQWLLVVAVAVPLNAANVVGYTKCQKDAKERLQSFAGDFLARTVMQQAASMATGQSTQPQQRAAAHQRP* # PASA_UPDATE: g12751.t1, single gene model update, valid-1, status:[pasa:asmbl_8985,status:12], valid-1 NODE_707_length_18816_cov_44.6234 . gene 13827 15655 . - . ID=g12751;Name=g12751.t1 NODE_707_length_18816_cov_44.6234 . mRNA 13827 15655 . - . ID=g12751.t1;Parent=g12751;Name=g12751.t1 NODE_707_length_18816_cov_44.6234 . five_prime_UTR 15580 15655 . - . ID=g12751.t1.utr5p1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 15431 15655 . - . ID=g12751.t1.exon1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 15431 15579 . - 0 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 15289 15340 . - . ID=g12751.t1.exon2;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 15289 15340 . - 1 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 14894 15205 . - . ID=g12751.t1.exon3;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 14894 15205 . - 0 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 14720 14785 . - . ID=g12751.t1.exon4;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 14720 14785 . - 0 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 14531 14616 . - . ID=g12751.t1.exon5;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 14531 14616 . - 0 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 14342 14453 . - . ID=g12751.t1.exon6;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 14342 14453 . - 1 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 14090 14232 . - . ID=g12751.t1.exon7;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 14090 14232 . - 0 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . exon 13827 13994 . - . ID=g12751.t1.exon8;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . CDS 13910 13994 . - 1 ID=cds.g12751.t1;Parent=g12751.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 13827 13909 . - . ID=g12751.t1.utr3p1;Parent=g12751.t1 #PROT g12751.t1 g12751 MAGAPIDGEIARKTFEFANNMQEVSQLDDIYTYNKEEQQMILASKPWTKDPHYFKKVKISALALLKMVMHARSGGTIEIMGLMQGKIDGESLIVTDAFALPVEGTETRVNAQAEGYEYMVEYMTLIKDVGRMENAVGWYHSHPGYGCWLSGIDVSTQLLNQQFQEPFVAIVVDPTRTVSAGRVELGAFRTYPAGYKPPDEPVSEYQSIPISKIEDFGVHCKQYYSLEVSYFKSSLDQKLLSLLWNKYWINTLSSSPLLMNRDYIAKQVEDLTEKLEQAQHHLNRSNTNATAGDKRKDDPLSKAAKDSSKSTIEAVHALMSQVLKDALFNHRCQH* # ORIGINAL: g12752.t2 original gene structure, not modified by PASA # ORIGINAL: g12752.t1 original gene structure, not modified by PASA NODE_707_length_18816_cov_44.6234 AUGUSTUS gene 15935 18653 . + . ID=g12752;Name=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS mRNA 15935 18653 . + . ID=g12752.t2;Parent=g12752;Name=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 15935 15980 . + . ID=g12752.t2.exon1;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 15935 15980 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16134 16218 . + . ID=g12752.t2.exon2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16134 16218 . + 2 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16351 16426 . + . ID=g12752.t2.exon3;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16351 16426 . + 1 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16515 16613 . + . ID=g12752.t2.exon4;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16515 16613 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16712 16835 . + . ID=g12752.t2.exon5;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16712 16835 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17008 17066 . + . ID=g12752.t2.exon6;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17008 17066 . + 2 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17203 17313 . + . ID=g12752.t2.exon7;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17203 17313 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17476 17689 . + . ID=g12752.t2.exon8;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17476 17689 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17785 17890 . + . ID=g12752.t2.exon9;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17785 17890 . + 2 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17974 18029 . + . ID=g12752.t2.exon10;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17974 18029 . + 1 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18198 18298 . + . ID=g12752.t2.exon11;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18198 18298 . + 2 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18403 18461 . + . ID=g12752.t2.exon12;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18403 18461 . + 0 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18545 18653 . + . ID=g12752.t2.exon13;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18545 18653 . + 1 ID=cds.g12752.t2;Parent=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS mRNA 15935 18653 . + . ID=g12752.t1;Parent=g12752;Name=g12752.t2 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 15935 15980 . + . ID=g12752.t1.exon1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 15935 15980 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16134 16218 . + . ID=g12752.t1.exon2;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16134 16218 . + 2 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16351 16426 . + . ID=g12752.t1.exon3;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16351 16426 . + 1 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16515 16613 . + . ID=g12752.t1.exon4;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16515 16613 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 16712 16835 . + . ID=g12752.t1.exon5;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 16712 16835 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17008 17066 . + . ID=g12752.t1.exon6;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17008 17066 . + 2 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17203 17313 . + . ID=g12752.t1.exon7;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17203 17313 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17476 17689 . + . ID=g12752.t1.exon8;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17476 17689 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17785 17890 . + . ID=g12752.t1.exon9;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17785 17890 . + 2 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 17974 18029 . + . ID=g12752.t1.exon10;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 17974 18029 . + 1 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18171 18298 . + . ID=g12752.t1.exon11;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18171 18298 . + 2 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18403 18461 . + . ID=g12752.t1.exon12;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18403 18461 . + 0 ID=cds.g12752.t1;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS exon 18545 18653 . + . ID=g12752.t1.exon13;Parent=g12752.t1 NODE_707_length_18816_cov_44.6234 AUGUSTUS CDS 18545 18653 . + 1 ID=cds.g12752.t1;Parent=g12752.t1 #PROT g12752.t2 g12752 MFSLFSSQTPIGEKIDKATSDLLVAEDWGANLEVCDLVNAEDNGPRDAIKAIIRRLQNKNGQVQLYTLTLLESLVKNCGERFHVAVASKEFMAEFVRLVTSKNAVCNPAREKMLSLLQSWVDAFRGNAKLAGIVDAYQNVRTQGVEFPAQDLDTLAPIHTPKATIAPVLDRRSSQSSQSDAPPPLVHAPPVPAPQSHTSQAPTQRIQPSPAQLDKLRSDLATVHANVAVLRDMMGHRDADPLVLSELHATCRAMQERVLRLLDQVADEVLIVELLTVNDELNVVFGRYEQRTKQPAAKESTAHDTQGPPTGLLVDIDAAPAQASAGMDRYAASTYSDGDTGPLHSSIHGAIKMKGDVEMIPDEDPFSAFADSRSYAASSSGFPVASPFPSEPASQVCVLMGLGLRVASVPLVPV* #PROT g12752.t1 g12752 MFSLFSSQTPIGEKIDKATSDLLVAEDWGANLEVCDLVNAEDNGPRDAIKAIIRRLQNKNGQVQLYTLTLLESLVKNCGERFHVAVASKEFMAEFVRLVTSKNAVCNPAREKMLSLLQSWVDAFRGNAKLAGIVDAYQNVRTQGVEFPAQDLDTLAPIHTPKATIAPVLDRRSSQSSQSDAPPPLVHAPPVPAPQSHTSQAPTQRIQPSPAQLDKLRSDLATVHANVAVLRDMMGHRDADPLVLSELHATCRAMQERVLRLLDQVADEVLIVELLTVNDELNVVFGRYEQRTKQPAAKESTAHDTQGPPTGLLVDIDAAPAQASAALTSIHPPAGMDRYAASTYSDGDTGPLHSSIHGAIKMKGDVEMIPDEDPFSAFADSRSYAASSSGFPVASPFPSEPASQVCVLMGLGLRVASVPLVPV* # PASA_UPDATE: g12749.t1, single gene model update, valid-1, status:[pasa:asmbl_8983,status:12], valid-1 NODE_707_length_18816_cov_44.6234 . gene 5713 7771 . - . ID=g12749;Name=g12749.t1 NODE_707_length_18816_cov_44.6234 . mRNA 5713 7771 . - . ID=g12749.t1;Parent=g12749;Name=g12749.t1 NODE_707_length_18816_cov_44.6234 . five_prime_UTR 7712 7771 . - . ID=g12749.t1.utr5p1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 7624 7771 . - . ID=g12749.t1.exon1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 7624 7711 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 7401 7534 . - . ID=g12749.t1.exon2;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 7401 7534 . - 2 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 7208 7299 . - . ID=g12749.t1.exon3;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 7208 7299 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 7022 7104 . - . ID=g12749.t1.exon4;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 7022 7104 . - 1 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 6844 6950 . - . ID=g12749.t1.exon5;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 6844 6950 . - 2 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 6610 6744 . - . ID=g12749.t1.exon6;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 6610 6744 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 6342 6428 . - . ID=g12749.t1.exon7;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 6342 6428 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 6034 6165 . - . ID=g12749.t1.exon8;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 6034 6165 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . exon 5713 5946 . - . ID=g12749.t1.exon9;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . CDS 5737 5946 . - 0 ID=cds.g12749.t1;Parent=g12749.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 5713 5736 . - . ID=g12749.t1.utr3p1;Parent=g12749.t1 #PROT g12749.t1 g12749 MSGGERNRQELEALLRLPGNDACADCRSKDPDWASANLGIFVCIECSGIHRNLGTHISKVRSVRLDVWPDDLVERMKETGNDLANAKWEANVPIACKRPHFNDSYVLREQWIRAKYERQEFVDKEKPLAYVTGMKEGFLHKKGKANNKWAKRWFVMDGVSISYFKQKQDPAPKDTLPVKDVNVTVASEKTGRPYALHISCAGRNYFVSAENGKDIVDWMSAIRAARAKALGIDASRTDFDAVVSRKLSRDFVIEGYLNKIGEMNKAWKRRWCTLDDKTIEYFKDPLDARALGEIRIGSAAEGYQVSEGEAGDVHELTLFVPASGRTFHFSSESKETVQKWVACIRDAIMDCDSLI* # PASA_UPDATE: g12748.t1, single gene model update, valid-1, status:[pasa:asmbl_8987,status:12], valid-1 NODE_707_length_18816_cov_44.6234 . gene 2849 5710 . + . ID=g12748;Name=g12748.t1 NODE_707_length_18816_cov_44.6234 . mRNA 2849 5710 . + . ID=g12748.t1;Parent=g12748;Name=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 2849 2933 . + . ID=g12748.t1.exon1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 2849 2933 . + 0 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 3025 4046 . + . ID=g12748.t1.exon2;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 3025 4046 . + 2 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 4164 4325 . + . ID=g12748.t1.exon3;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 4164 4325 . + 0 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 4412 4451 . + . ID=g12748.t1.exon4;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 4412 4451 . + 0 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 4560 4763 . + . ID=g12748.t1.exon5;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 4560 4763 . + 2 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 5180 5511 . + . ID=g12748.t1.exon6;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 5180 5511 . + 2 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . exon 5616 5710 . + . ID=g12748.t1.exon7;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . CDS 5616 5657 . + 0 ID=cds.g12748.t1;Parent=g12748.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 5658 5710 . + . ID=g12748.t1.utr3p1;Parent=g12748.t1 #PROT g12748.t1 g12748 MATVAVLPRIVASEWAHDVDHVWHGEIAALGAPVVFEPAGRWFEAHAARIRHNRTISQDEAIAHKGDDAGDADEESDEEEESAELLALDPKEWKSHDLYAIMGLSSLRYKANDDDIKRAFKRKVLRHHPDKKKSAASAEGLDDEGDDYFKCIKRAYEILSDPVRRRSFDSIDPEFDDSIPAATENAAVFFKEFSAAFDRNAHWTTKKGPAPSIGDLDTPFDQVEKFYDYWYNFESWREFSWLDEEDKEKAENRDEKRYIERQNKAQRTRRKKEEVSRMIRLVDAAYASDPRIRRYKEEQKEKKDRVKRDKEHAVRAAAEEKERVAAEERRVKELAAADAKAREEAEKAGREERKKAMRNERKQLRKACKTANYFFPEGSTGDKYLARVGQVELLCEKLSLEELIVLNEHMTSPDKAQTVLEAEIEKLKSSASSTDSQSKKEDKPEQVVRPWTEAETSALVKAAKQYPVGSVNRWESITTFVNSHAASSRTESEIIVRAKDMQNMDLSSKEKTNQAAFARFEQTKKSADAHIPQTASVNLENVQVAAAPAPSPVAAAAAVAAAAETASLEDRPWSPEEQKRLEEAMRGVPASATDRWDRIAARVGRPKKDCIKRYKELVEMVKAKKSGK* # PASA_UPDATE: g12747.t1, single gene model update, valid-1, status:[pasa:asmbl_8982,status:3], valid-1 NODE_707_length_18816_cov_44.6234 . gene 552 2612 . - . ID=g12747;Name=g12747.t1 NODE_707_length_18816_cov_44.6234 . mRNA 552 2612 . - . ID=g12747.t1;Parent=g12747;Name=g12747.t1 NODE_707_length_18816_cov_44.6234 . five_prime_UTR 2559 2612 . - . ID=g12747.t1.utr5p1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 2528 2612 . - . ID=g12747.t1.exon1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 2528 2558 . - 0 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 2340 2444 . - . ID=g12747.t1.exon2;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 2340 2444 . - 2 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 2129 2259 . - . ID=g12747.t1.exon3;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 2129 2259 . - 2 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 1582 2040 . - . ID=g12747.t1.exon4;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 1582 2040 . - 0 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 1302 1404 . - . ID=g12747.t1.exon5;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 1302 1404 . - 0 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 1075 1158 . - . ID=g12747.t1.exon6;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 1075 1158 . - 2 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . exon 552 967 . - . ID=g12747.t1.exon7;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . CDS 930 967 . - 2 ID=cds.g12747.t1;Parent=g12747.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 552 929 . - . ID=g12747.t1.utr3p1;Parent=g12747.t1 #PROT g12747.t1 g12747 MSTVPGDAPEHCPGVESDTAGKSAACAGCPNQDICSSSRPKGPDPDVDEIAQKMASIKHKILILSGKGGVGKSTFTAQLSFGLAQDEAQVAVLDIDICGPSIPRVMGVEGEQVHQSSSGWSPVYAGENIGVMSVGFLLPNPDDAVIWRGPKKNGIIKQFLKDVDWGECDYLVVDTPPGTSDEHLSIAQYLAGTHVDGAVIVTTPQDVSIIDVRKEITFCKKLHMPIIGIVENMSGFVCPKCKTESFIFPPTFGGGEVLAQETGVPFLGRIPLDPRIARCCDEGKSFLSEVPDSPAAAAYRHIIQGIKQHCEKTPVA* # PASA_UPDATE: g12750.t1, single gene model update, valid-1, status:[pasa:asmbl_8984,status:3], valid-1 NODE_707_length_18816_cov_44.6234 . gene 7891 12845 . - . ID=g12750;Name=g12750.t1 NODE_707_length_18816_cov_44.6234 . mRNA 7891 12845 . - . ID=g12750.t1;Parent=g12750;Name=g12750.t1 NODE_707_length_18816_cov_44.6234 . five_prime_UTR 12796 12845 . - . ID=g12750.t1.utr5p1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 12734 12845 . - . ID=g12750.t1.exon1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 12734 12795 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 12468 12639 . - . ID=g12750.t1.exon2;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 12468 12639 . - 1 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 12248 12373 . - . ID=g12750.t1.exon3;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 12248 12373 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 11912 12161 . - . ID=g12750.t1.exon4;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 11912 12161 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 11694 11780 . - . ID=g12750.t1.exon5;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 11694 11780 . - 2 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 11507 11589 . - . ID=g12750.t1.exon6;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 11507 11589 . - 2 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 11311 11360 . - . ID=g12750.t1.exon7;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 11311 11360 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 10772 11197 . - . ID=g12750.t1.exon8;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 10772 11197 . - 1 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 10502 10652 . - . ID=g12750.t1.exon9;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 10502 10652 . - 1 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 10193 10391 . - . ID=g12750.t1.exon10;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 10193 10391 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 9671 10069 . - . ID=g12750.t1.exon11;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 9671 10069 . - 2 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 9393 9568 . - . ID=g12750.t1.exon12;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 9393 9568 . - 2 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 9188 9307 . - . ID=g12750.t1.exon13;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 9188 9307 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 8746 9113 . - . ID=g12750.t1.exon14;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 8746 9113 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 8623 8656 . - . ID=g12750.t1.exon15;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 8623 8656 . - 1 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 8218 8530 . - . ID=g12750.t1.exon16;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 8218 8530 . - 0 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . exon 7891 8121 . - . ID=g12750.t1.exon17;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . CDS 7964 8121 . - 2 ID=cds.g12750.t1;Parent=g12750.t1 NODE_707_length_18816_cov_44.6234 . three_prime_UTR 7891 7963 . - . ID=g12750.t1.utr3p1;Parent=g12750.t1 #PROT g12750.t1 g12750 MVKARFTTLDLRAVVTEIRSRVTGMRVANIYDLDSKTYLFKFAQSEEKVFLLIESGIRIHSTQFERSKSNSPSGFAMKLRKHLRTRRLTDMRQLGADRVVDLQFGSGEAAYHVIVELYDKGNIVLTDSELRILSLLRTRTTDEDVRIAVGEVYPVAAARGETVMNDAVLCELLSQSSAEHTVAVGDEAPQGALSLKKLLTAAVGYGSSIVEHCIIKAGLDPSAKLPIPHLVPGSASFLALRDSLVEAKDLMDAADRHNSKGFIFTSTKSVNAEGGPLYESFEPVVLLQDADRPHIAFDSFDRAVDEYFSRIEGQRIDVRAAQQEAQASKRIGYLRRENEQRIEGLRKAQDEDAVRGRAIEAAGDTVGRAIAIVCGAVARAMQWEAISAMVEEAKAARDPVALAITALRLDSNAIAMSLPDPDAENANEARRVRVDIDLGLSAHANARRYFDKRRHAAEKERKTVEQSGKAMKSAEQKTRKAAKAAATATSATIVKMRKPFWFEKFVWFVSSDNYLVIAGRDMQQNELIVGRHLKKGDIYVHADLSGAASCVVKNPSRDGSIPPPRTLQEAGSLAVCCSAAWDAKIVTGAWWVHDDQVSKTPPTGEYLPTGSFMIRGKKNFLPPAHLVLGFGFLFRLEDGSVAAHAGERKAVDTEPLAAIAHTVVEAEEAAEELNDDEATDSTASGDEAFPDTRVAAVPTNLPATDGSDAEGEGDDAPVGSLVGKSEQASRHVSAKERRDIKKASASGSAPQSTTGTRSAKTTPPPTETPQSQRQVRGKKGKLKKIKEKYADQDEEERALRMSLLQSVGSKKTATSDDKTAAKKRSGAVGSQPSQNAQAAHKHAPAVGCTVDLATAGRKPPEHVSRVLALDVQPADTRNQEVGDRASDESRSATDCASIVVETAAYGTEAGNALVRAHIMGSIDNAVDGAASDGPEDEADGAGDEAESAGDVPDDQGDDGLLNALTGAPLANDELLFAVPVCAPYSAMSAYKFRVKLTPGTTKKGKAAKAALNAFIQNREATARERDLMKGVRDTDLFLNIPGKVKVVVPVKAAAGRR* # PASA_UPDATE: g5987.t1, single gene model update, valid-1, status:[pasa:asmbl_5155,status:12], valid-1 NODE_2871_length_4879_cov_38.1332 . gene 2123 3792 . - . ID=g5987;Name=g5987.t1 NODE_2871_length_4879_cov_38.1332 . mRNA 2123 3792 . - . ID=g5987.t1;Parent=g5987;Name=g5987.t1 NODE_2871_length_4879_cov_38.1332 . exon 3134 3792 . - . ID=g5987.t1.exon1;Parent=g5987.t1 NODE_2871_length_4879_cov_38.1332 . CDS 3134 3792 . - 0 ID=cds.g5987.t1;Parent=g5987.t1 NODE_2871_length_4879_cov_38.1332 . exon 2123 2877 . - . ID=g5987.t1.exon2;Parent=g5987.t1 NODE_2871_length_4879_cov_38.1332 . CDS 2193 2877 . - 1 ID=cds.g5987.t1;Parent=g5987.t1 NODE_2871_length_4879_cov_38.1332 . three_prime_UTR 2123 2192 . - . ID=g5987.t1.utr3p1;Parent=g5987.t1 #PROT g5987.t1 g5987 MYSRGQRGRGGGDWRRGRGWNRGRGRGGGGGDGRDQQRSTWGSEAAFGSESHVEHRGYRPPPPSWDRFSGERVQTGGHRMFAQDGSRRAHVPHPPRNNNGPQPHNSFVRHTHNYGARGSQDTMFSNQVDELTTVDALPSSLLRTCGYDGSVAITVTNSIEACDQFMETAFGVTGVTASCDAVGLDMEWRPSFQKGVVFPMSLIQVSTRQSCMLFQTSVLRATRSEQLPSKLLALLSNPAIAKVGVGISEDLRKLATEWEGVTWDNIVDVGDAAGVAIANNERHALLVAQREERAALAGAPEFDSQDVTRTPGIGGTAAPAAKAVAKKATPLPKAMRVGLKRLVCDYLGFEMNKPKRVTMSNWEARELSPEQVQYAAADAWMSLAVYRRMREMGVAMTSLSSRPPQRARDAGDGKKPKRKAGGDGSVGGEDVNNGRAKRAALARHGSI* # PASA_UPDATE: g5986.t1, single gene model update, valid-1, status:[pasa:asmbl_5154,status:12], valid-1 NODE_2871_length_4879_cov_38.1332 . gene 231 1932 . + . ID=g5986;Name=g5986.t1 NODE_2871_length_4879_cov_38.1332 . mRNA 231 1932 . + . ID=g5986.t1;Parent=g5986;Name=g5986.t1 NODE_2871_length_4879_cov_38.1332 . five_prime_UTR 231 232 . + . ID=g5986.t1.utr5p1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . exon 231 277 . + . ID=g5986.t1.exon1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . CDS 233 277 . + 0 ID=cds.g5986.t1;Parent=g5986.t1;5_prime_partial=true NODE_2871_length_4879_cov_38.1332 . exon 441 534 . + . ID=g5986.t1.exon2;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . CDS 441 534 . + 0 ID=cds.g5986.t1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . exon 681 727 . + . ID=g5986.t1.exon3;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . CDS 681 727 . + 2 ID=cds.g5986.t1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . exon 1292 1352 . + . ID=g5986.t1.exon4;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . CDS 1292 1352 . + 0 ID=cds.g5986.t1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . exon 1662 1932 . + . ID=g5986.t1.exon5;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . CDS 1662 1693 . + 2 ID=cds.g5986.t1;Parent=g5986.t1 NODE_2871_length_4879_cov_38.1332 . three_prime_UTR 1694 1932 . + . ID=g5986.t1.utr3p1;Parent=g5986.t1 #PROT g5986.t1 g5986 QLMNVNMNEMLITMKNMNENMMKKMDVIQLTADKMIATMTNLMTAADTHALNVIYNTYQMCNVMTVGLEKGKGCRLGFGFPNGVPTVENPPQ* # PASA_UPDATE: g8401.t1, single gene model update, valid-1, status:[pasa:asmbl_2013,status:3], valid-1 NODE_1572_length_10404_cov_44.2404 . gene 4774 7188 . + . ID=g8401;Name=g8401.t1 NODE_1572_length_10404_cov_44.2404 . mRNA 4774 7188 . + . ID=g8401.t1;Parent=g8401;Name=g8401.t1 NODE_1572_length_10404_cov_44.2404 . five_prime_UTR 4774 5068 . + . ID=g8401.t1.utr5p1;Parent=g8401.t1 NODE_1572_length_10404_cov_44.2404 . exon 4774 7188 . + . ID=g8401.t1.exon1;Parent=g8401.t1 NODE_1572_length_10404_cov_44.2404 . CDS 5069 7150 . + 0 ID=cds.g8401.t1;Parent=g8401.t1 NODE_1572_length_10404_cov_44.2404 . three_prime_UTR 7151 7188 . + . ID=g8401.t1.utr3p1;Parent=g8401.t1 #PROT g8401.t1 g8401 MLGRSAYALKNMKQYGGFSARSLQCVGAVFAASLVLIMAAVASQSSRPPEIVAQRPAPGRLMRASPSVDGGILLASTPPPNHTRNTTAWLRSLIPNGRPFHFESIVQPLQNGRQESDSSARVTDEMLIRDVTIIMTYKETVNAIKYALPALVSSVPRMMSIIAVVGGPCNDCRMWVDEFVRVAVETGIAPRLRLMHVEDFLPSLAARRRAVPLVESKYALFMNNDCFLAHPSALRELYAAAEWKEPSGTLFAPFISEMRHGAATGMHGNMGGMVFTVGSNGVADMQMREDARRAALDTTAFPNGTLYEALSGIEDHVLLIRHPQTSVSSIFDPSAALGQEFVDTILNLRYAGMRAFEVFDSWWLLGLTDGASIHDLPYVAWRRSDYMAAATIYYISQKWSIHIGYSGFHFRFRMTSLKELSWSTLSGSAPSEGRESAVAVVAMSALIGFNSFVVSVGDRVVCNNTLWHETYQTLADVCDSPESAPESERLHDREASNVSEVFHGKDVVVTVNASLALRRHFLPNTFNDNAQRAKAVQAGKFGRLIQTNATYELMPSREDSLFFPDIVAVHVRGLPYSPDSNITRAVIDESAMCWSCDGKRTMQCLLWFSRAVSGAAEVTAAMSLLTRASLHASGSVGSSAPAVHVSLTERKTLSPLTLMDGPVWLFSAVKVTIASSTPAAIAAAVAMIVGIPS* # PASA_UPDATE: g8402.t1, single gene model update, valid-1, status:[pasa:asmbl_2012,status:12], valid-1 NODE_1572_length_10404_cov_44.2404 . gene 7281 10176 . - . ID=g8402;Name=g8402.t1 NODE_1572_length_10404_cov_44.2404 . mRNA 7281 10176 . - . ID=g8402.t1;Parent=g8402;Name=g8402.t1 NODE_1572_length_10404_cov_44.2404 . five_prime_UTR 10126 10176 . - . ID=g8402.t1.utr5p1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 9879 10176 . - . ID=g8402.t1.exon1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 9879 10125 . - 0 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 9466 9766 . - . ID=g8402.t1.exon2;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 9466 9766 . - 2 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 9191 9332 . - . ID=g8402.t1.exon3;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 9191 9332 . - 1 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 8836 9070 . - . ID=g8402.t1.exon4;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 8836 9070 . - 0 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 8508 8707 . - . ID=g8402.t1.exon5;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 8508 8707 . - 2 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 7996 8346 . - . ID=g8402.t1.exon6;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 7996 8346 . - 0 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 7731 7778 . - . ID=g8402.t1.exon7;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 7731 7778 . - 0 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . exon 7281 7550 . - . ID=g8402.t1.exon8;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . CDS 7422 7550 . - 0 ID=cds.g8402.t1;Parent=g8402.t1 NODE_1572_length_10404_cov_44.2404 . three_prime_UTR 7281 7421 . - . ID=g8402.t1.utr3p1;Parent=g8402.t1 #PROT g8402.t1 g8402 MFSNRGSSTMSRTSILVAFAVAFALPLACLSLPVGSSRGDWLIGARADGSESVTLSFAIKQRNSDVLTERFEAVSDPRHADYGKFFTREELIALVSSNDDDVAAVTNWLVSSGVAQSDIELTGSRDILRAKVSASLAETLLGVNIHVFTHAQRGIEILRATQAPLLPIDVRSVVDFVSGLNHFPVVRNLREHNAINAESNITPAFLRKLYGITDIASGKTNSSQALAEFQGQSYSVSDLSKFESTNSIPSQTVRKVTGAGAGSAQIEGNLDIQYILVAGQNVATDYWLEDGFDFDLVAWIAKVEATNDSPLVWSVSYGEDLSEVTADYAQRLDKEFQKLGLLGVSVIFASGDSGVYSRTGGTSRFHPSFPASLPSVTAVGATQLDGGVEKQGVNWSGGGFSLSNYFARAQSASYQNAAVAAYFNEQKSTLPPATYYDTNGRGFPDVSAQGVNYAIIEDGSVELVSGTSASAPLFAGIIGLLNDLRLQGGKQPLGFLNPFLYQNPQAFNDITQGTNNNGEKYGFNAAAGWDPVTGLGTPNYPKLKDAALKA* # ORIGINAL: g8400.t1 original gene structure, not modified by PASA NODE_1572_length_10404_cov_44.2404 AUGUSTUS gene 1948 3531 . + . ID=g8400;Name=g8400.t1 NODE_1572_length_10404_cov_44.2404 AUGUSTUS mRNA 1948 3531 . + . ID=g8400.t1;Parent=g8400;Name=g8400.t1 NODE_1572_length_10404_cov_44.2404 AUGUSTUS exon 1948 3531 . + . ID=g8400.t1.exon1;Parent=g8400.t1 NODE_1572_length_10404_cov_44.2404 AUGUSTUS CDS 1948 3531 . + 0 ID=cds.g8400.t1;Parent=g8400.t1 #PROT g8400.t1 g8400 MPTHETNGALTGQSLQLRLFTVVALFVPVAVIFAAGVWITGSDRLVLDMGRIQGDYSTGTPHEGSNNGMSRRVESDASPTTTKWQADGRADSVLHCDQGDPLRVRREWNTFDRHPRDRRLYCHGAALLTGRRECAWPLGSHPTSIFISTGQNNPFGAYIRTSAFDRDFEVRPRAILSSEGRLLMESAENSVARAQNIAIVTQGTMDRILQHLDHMARIWQGPISIAVFVDDPQRDEALVVKLISETPLLQQWVDVHFVRRRGYKATDAGTHYPINMLRNVAMEHAVPDWNFVLDLDVFPSACMSAFVSQVAAAEQMYASAYEPDGDTACPGLVAYIPPSVELPQTNGSLSLHNNTNCIFHSKADAVADLQTGRLRPMHMYFPPAYMPTNHSRWMSTPSKDGFFEVQYELHFEPYFIARKDIPRFNESFVDRGGNFAQQVLHMNGAGFRFVVLSDVFTIDQPHGPAGHVPLLPERHKFLVQFEAQVVRAYGLTPPPDLAGLRLDSSVVQRLMLEVEKFSLVNETKGPN* # PASA_UPDATE: g8399.t1, single gene model update, valid-1, status:[pasa:asmbl_2011,status:12], valid-1 NODE_1572_length_10404_cov_44.2404 . gene 186 1052 . - . ID=g8399;Name=g8399.t1 NODE_1572_length_10404_cov_44.2404 . mRNA 186 1052 . - . ID=g8399.t1;Parent=g8399;Name=g8399.t1 NODE_1572_length_10404_cov_44.2404 . five_prime_UTR 1000 1052 . - . ID=g8399.t1.utr5p1;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . exon 877 1052 . - . ID=g8399.t1.exon1;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . CDS 877 999 . - 0 ID=cds.g8399.t1;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . exon 405 640 . - . ID=g8399.t1.exon2;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . CDS 405 640 . - 0 ID=cds.g8399.t1;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . exon 186 294 . - . ID=g8399.t1.exon3;Parent=g8399.t1 NODE_1572_length_10404_cov_44.2404 . CDS 186 294 . - 1 ID=cds.g8399.t1;Parent=g8399.t1 #PROT g8399.t1 g8399 MASYDKLRDELAKGGEAEFEAAFRSAHDEALKLNKLERQSQAHKFVVLLRDSLKARLADISSSEAIRLKAESLQKELDADVKIAHVEKVYGQIKDFLSNFEGEEGWTLQDKDANLQILYRHQEGHEYHTIRAEGTLDCPLFNMIVVANELDLIKT* # PASA_UPDATE: g9110.t1, single gene model update, valid-1, status:[pasa:asmbl_934,status:3], valid-1 # PASA_UPDATE: g9110.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_935,status:3], valid-1 NODE_1243_length_12782_cov_37.7688 . gene 6201 9413 . - . ID=g9110;Name=g9110.t1 NODE_1243_length_12782_cov_37.7688 . mRNA 6201 9413 . - . ID=g9110.t1;Parent=g9110;Name=g9110.t1 NODE_1243_length_12782_cov_37.7688 . five_prime_UTR 9088 9413 . - . ID=g9110.t1.utr5p1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 9006 9413 . - . ID=g9110.t1.exon1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 9006 9087 . - 0 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 8665 8771 . - . ID=g9110.t1.exon2;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 8665 8771 . - 2 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 8221 8488 . - . ID=g9110.t1.exon3;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 8221 8488 . - 0 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 7696 7988 . - . ID=g9110.t1.exon4;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 7696 7988 . - 2 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 7275 7361 . - . ID=g9110.t1.exon5;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 7275 7361 . - 0 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 6860 6952 . - . ID=g9110.t1.exon6;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 6860 6952 . - 0 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . exon 6201 6666 . - . ID=g9110.t1.exon7;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . CDS 6484 6666 . - 0 ID=cds.g9110.t1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . three_prime_UTR 6201 6483 . - . ID=g9110.t1.utr3p1;Parent=g9110.t1 NODE_1243_length_12782_cov_37.7688 . mRNA 6201 9413 . - . ID=g9110.t1.1.5b6be70a;Parent=g9110;Name=g9110.t1 NODE_1243_length_12782_cov_37.7688 . five_prime_UTR 9088 9413 . - . ID=g9110.t1.1.5b6be70a.utr5p1;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 9006 9413 . - . ID=g9110.t1.1.5b6be70a.exon1;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . CDS 9006 9087 . - 0 ID=cds.g9110.t1.1.5b6be70a;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 8665 8771 . - . ID=g9110.t1.1.5b6be70a.exon2;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . CDS 8665 8771 . - 2 ID=cds.g9110.t1.1.5b6be70a;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 8221 8488 . - . ID=g9110.t1.1.5b6be70a.exon3;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . CDS 8221 8488 . - 0 ID=cds.g9110.t1.1.5b6be70a;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 7696 7988 . - . ID=g9110.t1.1.5b6be70a.exon4;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . CDS 7696 7988 . - 2 ID=cds.g9110.t1.1.5b6be70a;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 6860 7361 . - . ID=g9110.t1.1.5b6be70a.exon5;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . CDS 7161 7361 . - 0 ID=cds.g9110.t1.1.5b6be70a;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . exon 6201 6666 . - . ID=g9110.t1.1.5b6be70a.exon6;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . three_prime_UTR 6860 7160 . - . ID=g9110.t1.1.5b6be70a.utr3p1;Parent=g9110.t1.1.5b6be70a NODE_1243_length_12782_cov_37.7688 . three_prime_UTR 6201 6666 . - . ID=g9110.t1.1.5b6be70a.utr3p2;Parent=g9110.t1.1.5b6be70a #PROT g9110.t1 g9110 MSFEDVVSGRRHGDAQPTEDTSNSSMEGLDTLESLNERFDALGLALTVHMRKVESSCSRLLKLGEHVGSMRREDVSEITRALAAEKGRASASSGEMHRILAELSGIVALMAEWGDFEAVHNKMRELYLQYGRVAEMFSRASKMVNTIRLECQGSPAFMGRSIQTSSSVDGNMPSSTSNGGLHADAYGSMRQRTASSSQGSQGRATGGQAQTQVHVPIVVVDGRREQEFDSLVHELKELHGLFAELAGHVQREAVQVNTIEQHIVEAKAHMQQGNSDLKAASRYQVAAYPLLGAVVGGLVAGPVGVLAGLKGVAAIGACLAGLGIGAGAGQGIKKIAMKNVDAVDGGDIRSAADAIAHQHAVDDMAKVLGD* #PROT g9110.t1.1.5b6be70a g9110 MSFEDVVSGRRHGDAQPTEDTSNSSMEGLDTLESLNERFDALGLALTVHMRKVESSCSRLLKLGEHVGSMRREDVSEITRALAAEKGRASASSGEMHRILAELSGIVALMAEWGDFEAVHNKMRELYLQYGRVAEMFSRASKMVNTIRLECQGSPAFMGRSIQTSSSVDGNMPSSTSNGGLHADAYGSMRQRTASSSQGSQGRATGGQAQTQVHVPIVVVDGRREQEFDSLVHELKELHGLFAELAGHVQREAVQVNTIEQHIVEAKAHMQQGNSDLKAVSTLAIGLFYDAQRSGMGCAEAVVWIISIAGQKSRTM* # ORIGINAL: g9108.t1 original gene structure, not modified by PASA NODE_1243_length_12782_cov_37.7688 AUGUSTUS gene 192 3457 . - . ID=g9108;Name=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS mRNA 192 3457 . - . ID=g9108.t1;Parent=g9108;Name=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 3445 3457 . - . ID=g9108.t1.exon1;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 3445 3457 . - 0 ID=cds.g9108.t1;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 3217 3316 . - . ID=g9108.t1.exon2;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 3217 3316 . - 2 ID=cds.g9108.t1;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 2877 3012 . - . ID=g9108.t1.exon3;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 2877 3012 . - 1 ID=cds.g9108.t1;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 2548 2720 . - . ID=g9108.t1.exon4;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 2548 2720 . - 0 ID=cds.g9108.t1;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 192 2245 . - . ID=g9108.t1.exon5;Parent=g9108.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 192 2245 . - 1 ID=cds.g9108.t1;Parent=g9108.t1 #PROT g9108.t1 g9108 MDDDEDICRVCRLEAADDRPLFHPCLCTGSIRYVHQDCLMQWLRHSRNRSCELCKHPFTFQPVYAESMPTRLGLTEIALGVVKRGSRVARKWVRGALVAIVWLGVVPYVTSRVWRTVFSLEEEDGDARVADAVAKQPSFWGGIASDCLEGSIVAASTVILFFTLMSLRDFVVSHMHEFFPDAGNNDAAADLPRDEIDAQRGGGAAGRNGVDDGWFDDNNVGDDFGNIADVGNNNNNNNGDVPLDDLAFGAVGEEVAGGGAGGMFGLFVDGAGDEVNLLDFLGFTGPVLNMVIHAFWAVVFICSFVFIFAYLPYVTGDAVRAVAVPVRESTSVSSVSTGAPSALVASPSSRWLTGSAKLDAIVTAFVGYVSIGSAASLVLLLGSAILRSRAAAAASAAVAAANSADAPPAPGTSGLSRAAWMVSTLFKVCFLMVCELVFFPLGFGWWLDLCTLDLFGFTLEGRRQMASTMPVTSACLHWMGGMVFMFHFGAFVSVVRDTLRPGLLFFLRDPNNPNFHPIRDMVRLPLVRHLRRLATSVVLYGSVVLLSVYIPVVVVRRCLPSLVPLRLTVGSSVTDVPIDLILFNVAVPFCADKLRPRDKFAWLLLEWAKGVGRVLGLESYLLESREDEHSDDEGGVHAIGRDGGDGGDDSDNSDSDSEESVGAVDVARARYGRVEAADAGESDVDVTGSDDGGSGNDDSDVVPVGGVHGMRRRRVHGHGPAVREDGVRADARRHDVNNNNNADNHHRHHHHHPHPHGHLNNNDANNGNGNNINNDADGDGPRLLHNGDPFVPYTKPPMFAPRVGALLVMSWATMAAFNGSIVVVP # PASA_UPDATE: g9111.t1, single gene model update, valid-1, status:[pasa:asmbl_932,status:3], valid-1 NODE_1243_length_12782_cov_37.7688 . gene 9667 11093 . + . ID=g9111;Name=g9111.t1 NODE_1243_length_12782_cov_37.7688 . mRNA 9667 11093 . + . ID=g9111.t1;Parent=g9111;Name=g9111.t1 NODE_1243_length_12782_cov_37.7688 . five_prime_UTR 9667 9752 . + . ID=g9111.t1.utr5p1;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . exon 9667 10229 . + . ID=g9111.t1.exon1;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . CDS 9753 10229 . + 0 ID=cds.g9111.t1;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . exon 10413 10458 . + . ID=g9111.t1.exon2;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . CDS 10413 10458 . + 0 ID=cds.g9111.t1;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . exon 10721 11093 . + . ID=g9111.t1.exon3;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . CDS 10721 10986 . + 2 ID=cds.g9111.t1;Parent=g9111.t1 NODE_1243_length_12782_cov_37.7688 . three_prime_UTR 10987 11093 . + . ID=g9111.t1.utr3p1;Parent=g9111.t1 #PROT g9111.t1 g9111 MAVQELSYAERAALCSNPTARALFETMERKKSNLSVAVDVTKKADLIAIADAIGPHICMLKTHIDVIDDFDAALARDLSALAEKHDFVIFEDRKFADIGNTVKLQYRDGVYRIADWAHVVDAHVVPGPGIVEGLREVGLPKGRGLLLLAEMSSKGALATGSYTEAAISMANDYTDFVIGFICSRRLVHDRPSLLHCTPGVSMADSGDALGQQYRTPEQVVAGGSDVIIVGRGVYGSGDARANALRYREAGWAAYCKRIGRDL* # ORIGINAL: g9112.t1 original gene structure, not modified by PASA NODE_1243_length_12782_cov_37.7688 AUGUSTUS gene 11478 12249 . - . ID=g9112;Name=g9112.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS mRNA 11478 12249 . - . ID=g9112.t1;Parent=g9112;Name=g9112.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 12008 12249 . - . ID=g9112.t1.exon1;Parent=g9112.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 12008 12249 . - 0 ID=cds.g9112.t1;Parent=g9112.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS exon 11478 11820 . - . ID=g9112.t1.exon2;Parent=g9112.t1 NODE_1243_length_12782_cov_37.7688 AUGUSTUS CDS 11478 11820 . - 1 ID=cds.g9112.t1;Parent=g9112.t1 #PROT g9112.t1 g9112 MQTSLLFVEGSEGDSWRSLQVHSWASAKGGLSDPPTNSAYTSRLSAESNESGATAAAAKLAEEASAVGTAGKKGSWHGQCWYVYPHPKTNAPIYANFVTVGKTTTASIASDRDTARARLDELAPLRTPITVYYNPANPSESVLFPYWFGAHAAVVGIAAVAIVPCFVIGMFRLHVARILSRVLVAQKYLPRVHL* # PASA_UPDATE: g9109.t1, single gene model update, valid-1, status:[pasa:asmbl_931,status:3], valid-1 NODE_1243_length_12782_cov_37.7688 . gene 3899 5744 . + . ID=g9109;Name=g9109.t1 NODE_1243_length_12782_cov_37.7688 . mRNA 3899 5744 . + . ID=g9109.t1;Parent=g9109;Name=g9109.t1 NODE_1243_length_12782_cov_37.7688 . five_prime_UTR 3899 4024 . + . ID=g9109.t1.utr5p1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . exon 3899 4139 . + . ID=g9109.t1.exon1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . CDS 4025 4139 . + 0 ID=cds.g9109.t1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . exon 4335 4590 . + . ID=g9109.t1.exon2;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . CDS 4335 4590 . + 2 ID=cds.g9109.t1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . exon 4827 4985 . + . ID=g9109.t1.exon3;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . CDS 4827 4985 . + 1 ID=cds.g9109.t1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . exon 5374 5744 . + . ID=g9109.t1.exon4;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . CDS 5374 5551 . + 1 ID=cds.g9109.t1;Parent=g9109.t1 NODE_1243_length_12782_cov_37.7688 . three_prime_UTR 5552 5744 . + . ID=g9109.t1.utr3p1;Parent=g9109.t1 #PROT g9109.t1 g9109 MGERYGFSLTTFSPSGKLVQIEYALQAVMSGTTSIGIKATNGVVIATEKKLPSVLIDETSLNKVSNITKTTGVVYSGMGPDSRVLVRKARRLAQQYFRVYGEDMPVSQLVREIATVMQEFTQSGGVRPFGVSLLVAGWDVDKGPSLYQVDPSGSYFAWKASAIGKNMINGKTFLEKRYNDDIELEDAVHTAILALKEGFEGQMTESNIELGIATADGFRQLPPSEVKDYLAAILS* # ORIGINAL: g2722.t1 original gene structure, not modified by PASA NODE_7084_length_472_cov_94.8363_potentialcontaminant AUGUSTUS gene 67 400 . - . ID=g2722;Name=g2722.t1 NODE_7084_length_472_cov_94.8363_potentialcontaminant AUGUSTUS mRNA 67 400 . - . ID=g2722.t1;Parent=g2722;Name=g2722.t1 NODE_7084_length_472_cov_94.8363_potentialcontaminant AUGUSTUS exon 67 400 . - . ID=g2722.t1.exon1;Parent=g2722.t1 NODE_7084_length_472_cov_94.8363_potentialcontaminant AUGUSTUS CDS 67 400 . - 1 ID=cds.g2722.t1;Parent=g2722.t1 #PROT g2722.t1 g2722 APSVRRIQNSAGVVVEDVGSAKAAWFEYFNRLGNPTVQEGEFDDEFKRFVEDELAKEYSPELSDDFKLLCEPIEDGEVHRALSAVQIGKAAGPDGVPNELLKAGGDFMAI* # PASA_UPDATE: g702.t1, single gene model update, valid-1, status:[pasa:asmbl_3647,status:12], valid-1 NODE_2160_length_7467_cov_43.2033 . gene 5493 7382 . + . ID=g702;Name=g702.t1 NODE_2160_length_7467_cov_43.2033 . mRNA 5493 7382 . + . ID=g702.t1;Parent=g702;Name=g702.t1 NODE_2160_length_7467_cov_43.2033 . five_prime_UTR 5493 5548 . + . ID=g702.t1.utr5p1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 5493 5587 . + . ID=g702.t1.exon1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 5549 5587 . + 0 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 5694 5751 . + . ID=g702.t1.exon2;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 5694 5751 . + 0 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 5858 5940 . + . ID=g702.t1.exon3;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 5858 5940 . + 2 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 6180 6315 . + . ID=g702.t1.exon4;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 6180 6315 . + 0 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 6426 6526 . + . ID=g702.t1.exon5;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 6426 6526 . + 2 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 6667 7206 . + . ID=g702.t1.exon6;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 6667 7206 . + 0 ID=cds.g702.t1;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . exon 7374 7382 . + . ID=g702.t1.exon7;Parent=g702.t1 NODE_2160_length_7467_cov_43.2033 . CDS 7374 7382 . + 0 ID=cds.g702.t1;Parent=g702.t1 #PROT g702.t1 g702 MMRAVLFSSPAAKASRVAPRAFYVLSRGYATEIEEQDLVVIGGGPGGYVGAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLNNSHYYHMAKHDFANRGIVVGDVKIDLAKMMSAKTTSVGALTKGVEGLFKKNKVNYVKGSGSITSPNTVEVELLEGGKQTIRAKNIMIATGSEVTPFPGIPIDEKTIVSSTGALSLDKIPGKMIVIGGGVIGLELGSVWSRLGSEVTVVEYLTSIGGVGIDGEVAKTFQRSLGKQGLKFKLGTKVTGATKTSSGGIEVHVEAAAGGQKETLAADVLLVSIGRRPFTQGLGLDKAF* # PASA_UPDATE: g701.t1, single gene model update, valid-1, status:[pasa:asmbl_3649,status:12], valid-1 # PASA_UPDATE: g701.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3650,status:12], valid-1 NODE_2160_length_7467_cov_43.2033 . gene 3044 5094 . - . ID=g701;Name=g701.t1 NODE_2160_length_7467_cov_43.2033 . mRNA 3044 5094 . - . ID=g701.t1;Parent=g701;Name=g701.t1 NODE_2160_length_7467_cov_43.2033 . five_prime_UTR 5010 5094 . - . ID=g701.t1.utr5p1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 4956 5094 . - . ID=g701.t1.exon1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 4956 5009 . - 0 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 4699 4771 . - . ID=g701.t1.exon2;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 4699 4771 . - 0 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 4247 4398 . - . ID=g701.t1.exon3;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 4247 4398 . - 2 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 3908 4067 . - . ID=g701.t1.exon4;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 3908 4067 . - 0 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 3470 3654 . - . ID=g701.t1.exon5;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 3470 3654 . - 2 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . exon 3044 3274 . - . ID=g701.t1.exon6;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . CDS 3203 3274 . - 0 ID=cds.g701.t1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . three_prime_UTR 3044 3202 . - . ID=g701.t1.utr3p1;Parent=g701.t1 NODE_2160_length_7467_cov_43.2033 . mRNA 3044 5094 . - . ID=g701.t1.1.5b6be70b;Parent=g701;Name=g701.t1 NODE_2160_length_7467_cov_43.2033 . five_prime_UTR 5010 5094 . - . ID=g701.t1.1.5b6be70b.utr5p1;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . exon 4956 5094 . - . ID=g701.t1.1.5b6be70b.exon1;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . CDS 4956 5009 . - 0 ID=cds.g701.t1.1.5b6be70b;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . exon 4699 4771 . - . ID=g701.t1.1.5b6be70b.exon2;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . CDS 4699 4771 . - 0 ID=cds.g701.t1.1.5b6be70b;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . exon 4247 4398 . - . ID=g701.t1.1.5b6be70b.exon3;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . CDS 4247 4398 . - 2 ID=cds.g701.t1.1.5b6be70b;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . exon 3908 4067 . - . ID=g701.t1.1.5b6be70b.exon4;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . CDS 3908 4067 . - 0 ID=cds.g701.t1.1.5b6be70b;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . exon 3044 3654 . - . ID=g701.t1.1.5b6be70b.exon5;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . CDS 3320 3654 . - 2 ID=cds.g701.t1.1.5b6be70b;Parent=g701.t1.1.5b6be70b NODE_2160_length_7467_cov_43.2033 . three_prime_UTR 3044 3319 . - . ID=g701.t1.1.5b6be70b.utr3p1;Parent=g701.t1.1.5b6be70b #PROT g701.t1 g701 MESTAPRWHVWDSLAQKRGLRHTIYSVNGDQYTGEWEHNKKHGKGTQLWHSGAKYDGDWRDGRRHGFGTYSVKSGPDEYRKVYAGAWKNDLYHGYGTCYYQDGGCYNGEWHCGKRSGWGTMQFADNSQYEGEWFDDMRNGQGILALENGNRYEGYWKDDRKNGPGRFFYLDKGQCYEGTWVDGTAKCGQFFDFDRDVAPKPTQYALPKLALHNADHVLDEAAMAALRRHVI* #PROT g701.t1.1.5b6be70b g701 MESTAPRWHVWDSLAQKRGLRHTIYSVNGDQYTGEWEHNKKHGKGTQLWHSGAKYDGDWRDGRRHGFGTYSVKSGPDEYRKVYAGAWKNDLYHGYGTCYYQDGGCYNGEWHCGKRSGWGTMQFADNSQYEGEWFDDMRNGQGILALENGNRYEGYWKDDRKNGPGRFFYLDKGQCYEGTWVDGTAKCGQFFDFDRDVAPKPTQYALPKVCLFVVLSSRGYFQCSCGLFASLCARGPFVFVDWIHEGTAWWVYNNTCI* # PASA_UPDATE: g700.t1, single gene model update, valid-1, status:[pasa:asmbl_3648,status:12], valid-1 NODE_2160_length_7467_cov_43.2033 . gene 116 2277 . - . ID=g700;Name=g700.t1 NODE_2160_length_7467_cov_43.2033 . mRNA 116 2277 . - . ID=g700.t1;Parent=g700;Name=g700.t1 NODE_2160_length_7467_cov_43.2033 . exon 1613 2277 . - . ID=g700.t1.exon1;Parent=g700.t1 NODE_2160_length_7467_cov_43.2033 . CDS 1613 2277 . - 0 ID=cds.g700.t1;Parent=g700.t1 NODE_2160_length_7467_cov_43.2033 . exon 1272 1469 . - . ID=g700.t1.exon2;Parent=g700.t1 NODE_2160_length_7467_cov_43.2033 . CDS 1272 1469 . - 1 ID=cds.g700.t1;Parent=g700.t1 NODE_2160_length_7467_cov_43.2033 . exon 116 1035 . - . ID=g700.t1.exon3;Parent=g700.t1 NODE_2160_length_7467_cov_43.2033 . CDS 116 1035 . - 1 ID=cds.g700.t1;Parent=g700.t1;3_prime_partial=true #PROT g700.t1 g700 MTTSHEGVPQRLPPLDSPPDVMHQKVASALDRPITPSSQVRPTSSKVRLAPITAGNGDSHAQPPPGSSADDAPRTGGEENDALGSLQPSFPTAQQSAGGASRLALRRYSALPDATPPVTKSLVSAGYVPVSAAEVMAMADFSEATAMFKPWPNMLLSQRTGHGGLRISSVIATKKIVPIYLGGNCEDTSAERDFLVKHAIPELQEMLKARNVPVKLHVVDLRWSPSDLQDPTRVVHAPRVSMELVDYCRPFFIGILGERYGWCPHYENYGLDPHSPRFGWIRDFPDGRSLTELETFFATCETQNAYGSQVRPSAFFYDRMIPASEAAERLQSIMNIGVINDAKFMLNLKLTLIRRGYPIKRFIVTEAARAADIAKFGEMVMEDIKRGIDEMFPPISGDLTQLHAQRETHFHVVETHTQTFVGREDLLRSMWRFVDSDGRARILALSGPPGAGKGALLSRFASVLTERGTGEFRCLPHFVGRAPGSSSVANLLLRLCEEIADAFNLPDKKFPSDFAELVKGEHLKKTMSRAMLQGICRRLVILIDNISGLDSSDDLEAHRMKWLPVDMPDGVRVIVSATRVPSPVASLIAGGSAA # ORIGINAL: g10674.t1 original gene structure, not modified by PASA NODE_3618_length_3108_cov_37.2819 AUGUSTUS gene 2106 3006 . - . ID=g10674;Name=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS mRNA 2106 3006 . - . ID=g10674.t1;Parent=g10674;Name=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS exon 2832 3006 . - . ID=g10674.t1.exon1;Parent=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS CDS 2832 3006 . - 0 ID=cds.g10674.t1;Parent=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS exon 2547 2618 . - . ID=g10674.t1.exon2;Parent=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS CDS 2547 2618 . - 2 ID=cds.g10674.t1;Parent=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS exon 2106 2272 . - . ID=g10674.t1.exon3;Parent=g10674.t1 NODE_3618_length_3108_cov_37.2819 AUGUSTUS CDS 2106 2272 . - 2 ID=cds.g10674.t1;Parent=g10674.t1 #PROT g10674.t1 g10674 MVDRMFSGGKVKTVAFSQAVSGCCLVAFMICAPYSVVLAGLLMAAAGAFSCCPDILISGPIAADFGEQDGRNVQATIAGIINGLGGLGAVLQGVIIGSVADMYGWMGVFYLIVFLSFLSTAILLPAFPIESSRRLML* # PASA_UPDATE: g10673.t1, single gene model update, valid-1, status:[pasa:asmbl_6309,status:12], valid-1 NODE_3618_length_3108_cov_37.2819 . gene 206 1722 . - . ID=g10673;Name=g10673.t1 NODE_3618_length_3108_cov_37.2819 . mRNA 206 1722 . - . ID=g10673.t1;Parent=g10673;Name=g10673.t1 NODE_3618_length_3108_cov_37.2819 . five_prime_UTR 1655 1722 . - . ID=g10673.t1.utr5p1;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . exon 1655 1722 . - . ID=g10673.t1.exon1;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . exon 1248 1343 . - . ID=g10673.t1.exon2;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . CDS 1248 1343 . - 0 ID=cds.g10673.t1;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . exon 943 1059 . - . ID=g10673.t1.exon3;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . CDS 943 1059 . - 0 ID=cds.g10673.t1;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . exon 206 335 . - . ID=g10673.t1.exon4;Parent=g10673.t1 NODE_3618_length_3108_cov_37.2819 . CDS 206 335 . - 0 ID=cds.g10673.t1;Parent=g10673.t1;3_prime_partial=true #PROT g10673.t1 g10673 MAEQKPEEVTIEKVDENAPDSDDEEGGEEMVLDESGKKISRNEKKARKAITKLGLKVVPGINRVTIKKAKNVVFSIVKPDVYKSPNSDTYIVFGEAKVEDLNARAAQQAAQQFQ # ORIGINAL: g2114.t1 original gene structure, not modified by PASA NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS gene 3850 5551 . + . ID=g2114;Name=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS mRNA 3850 5551 . + . ID=g2114.t1;Parent=g2114;Name=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS exon 3850 4256 . + . ID=g2114.t1.exon1;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS CDS 3850 4256 . + 0 ID=cds.g2114.t1;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS exon 4360 4873 . + . ID=g2114.t1.exon2;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS CDS 4360 4873 . + 1 ID=cds.g2114.t1;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS exon 5231 5303 . + . ID=g2114.t1.exon3;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS CDS 5231 5303 . + 0 ID=cds.g2114.t1;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS exon 5397 5551 . + . ID=g2114.t1.exon4;Parent=g2114.t1 NODE_2078_length_7843_cov_26.2961_potentialcontaminant AUGUSTUS CDS 5397 5551 . + 2 ID=cds.g2114.t1;Parent=g2114.t1 #PROT g2114.t1 g2114 MACCDTVQLAAERGHIECIKALRDGGVDLATYSYIFEWDGSAESAISEECCVFGAQEGGLISRTALHSATAFGHLHLVKWLVDNGASVDCEIYDGYGLTPLFCAVYYRRYDIARWFLEAGANPDACVISPVYREKWDKISGTCCGVHGMTPIYVASVKHDLASVRLLLEFGANASLGADHFCEYNFQSAIPAQSGPLNAAVHETLNLPLEAPQRAVAVDIAKALAAGGADLHAECVLESIATFGLDVLKHFLAAGLSIELSASGCNASLDMLRYFLSHVANFATSYAGVDTMVFSCAQLGLSDLSEVECFPKLTRLFAFFGAPVESARQYSADGNSYVPTLQHLCRRVIIAHDLKFADPDVGLPQHLVDYLSESDTVVNEML* # ORIGINAL: g1671.t1 original gene structure, not modified by PASA NODE_3961_length_2449_cov_33.0282 AUGUSTUS gene 404 2335 . + . ID=g1671;Name=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS mRNA 404 2335 . + . ID=g1671.t1;Parent=g1671;Name=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS exon 404 597 . + . ID=g1671.t1.exon1;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS CDS 404 597 . + 2 ID=cds.g1671.t1;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS exon 802 884 . + . ID=g1671.t1.exon2;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS CDS 802 884 . + 0 ID=cds.g1671.t1;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS exon 1222 1340 . + . ID=g1671.t1.exon3;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS CDS 1222 1340 . + 1 ID=cds.g1671.t1;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS exon 1568 1755 . + . ID=g1671.t1.exon4;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS CDS 1568 1755 . + 2 ID=cds.g1671.t1;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS exon 2031 2335 . + . ID=g1671.t1.exon5;Parent=g1671.t1 NODE_3961_length_2449_cov_33.0282 AUGUSTUS CDS 2031 2335 . + 0 ID=cds.g1671.t1;Parent=g1671.t1 #PROT g1671.t1 g1671 LKELVSLHGSTDHSNEEPLSLDEILIIKGVLEMKWKTVADCMTPVESVFMLPSDAILNKETMQLIMEAGYSRIPIYRDSRHQIIGLLLVKQLVMIDPDDDVPLISIINRIPPEVSKVMPLFDILNEFQTGKAHMAIIRDAPTRVGTTLGDVLGIITIEDVIEELIQEEIIDETDVYVDVHKKIRAVRFHKNPNDGIEGGATTSSGSLAQTKSRRFMSSLSVPRLDDHSDGGLSGEASLITSRTSLLSYTGHPNTNANNNPNNISSNTLAVPVASGAKPGQIPAEVVEAARRGGLR # PASA_UPDATE: g8730.t1, single gene model update, valid-1, status:[pasa:asmbl_6973,status:12], valid-1 NODE_4101_length_2182_cov_36.0479 . gene 115 1820 . - . ID=g8730;Name=g8730.t1 NODE_4101_length_2182_cov_36.0479 . mRNA 115 1820 . - . ID=g8730.t1;Parent=g8730;Name=g8730.t1 NODE_4101_length_2182_cov_36.0479 . five_prime_UTR 1819 1820 . - . ID=g8730.t1.utr5p1;Parent=g8730.t1 NODE_4101_length_2182_cov_36.0479 . exon 995 1820 . - . ID=g8730.t1.exon1;Parent=g8730.t1 NODE_4101_length_2182_cov_36.0479 . CDS 995 1818 . - 0 ID=cds.g8730.t1;Parent=g8730.t1;5_prime_partial=true NODE_4101_length_2182_cov_36.0479 . exon 115 820 . - . ID=g8730.t1.exon2;Parent=g8730.t1 NODE_4101_length_2182_cov_36.0479 . CDS 115 820 . - 1 ID=cds.g8730.t1;Parent=g8730.t1;3_prime_partial=true #PROT g8730.t1 g8730 KLYQYDDSAPNKRGAAIDPYVYWRNTIEPVTIYPFRAFGVYLPLPCCSSEAAFFDTGNAVTRFPCRFCEREDNTLFFSTQFGYVVYGVYALLFNGGRPYRYNPDNPPTYGYGDFLYAYSPQSSGDPDSNGKRDCADKVPGDISQNLFQWSCPKTTENEYFEIGFKEPLYLQAVTLYENYYPGAVVNIKARMNGTADQWVDVWNGEPQIELYDARGNYIDGKYRVFEPATCNTAFLVDALHIELATHRVPGWNEIESVALTGTRSLKDGVVTDPKGRVVYVPNKYANGNDEFAYRVFDCPFQQARSSGTATVRVSVTPVNNVPVSTSPSSSSPLSLSVGTPASIVLQGTDFDGNESMYFALKSNPSLGVLKRNGVVVTTASGQLNAGTSTKLVPVNFTLMYESLSATSCGDDSFSYIVTDGTVDSSVITVRVTVACAVVKSSNSLNLVPIIVPIALSFAILIIVFLAVSAHMSLKRKRDVQRLQRRVIDFKELKVMETLAEGSFGVVRKAE # PASA_UPDATE: g5212.t1, single gene model update, valid-1, status:[pasa:asmbl_7338,status:3], valid-1 NODE_445_length_23573_cov_55.6393 . gene 4653 8023 . - . ID=g5212;Name=g5212.t1 NODE_445_length_23573_cov_55.6393 . mRNA 4653 8023 . - . ID=g5212.t1;Parent=g5212;Name=g5212.t1 NODE_445_length_23573_cov_55.6393 . five_prime_UTR 7881 8023 . - . ID=g5212.t1.utr5p1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 7688 8023 . - . ID=g5212.t1.exon1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 7688 7880 . - 0 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 7451 7553 . - . ID=g5212.t1.exon2;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 7451 7553 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 7159 7352 . - . ID=g5212.t1.exon3;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 7159 7352 . - 1 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 6911 6978 . - . ID=g5212.t1.exon4;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 6911 6978 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 6503 6806 . - . ID=g5212.t1.exon5;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 6503 6806 . - 0 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 6206 6352 . - . ID=g5212.t1.exon6;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 6206 6352 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 5908 5991 . - . ID=g5212.t1.exon7;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 5908 5991 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 5690 5747 . - . ID=g5212.t1.exon8;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 5690 5747 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 5429 5586 . - . ID=g5212.t1.exon9;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 5429 5586 . - 1 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . exon 4653 5158 . - . ID=g5212.t1.exon10;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . CDS 4845 5158 . - 2 ID=cds.g5212.t1;Parent=g5212.t1 NODE_445_length_23573_cov_55.6393 . three_prime_UTR 4653 4844 . - . ID=g5212.t1.utr3p1;Parent=g5212.t1 #PROT g5212.t1 g5212 MAAVDSKKKFITILIAPTKSAPATNNVAGGTDAQSGDVVRVAFTEKTSFAALDRNIRVLCKIKAGQEYYLTDAEGDNVSIDGAMAEGRYILRLLDKLSADESDGCDDSSDDDKSKAVAGALKVEKVHHSRGHEFVARHFHAIELCFHCKQFVAGFGKQGYKCGRCKSICHKKCYEEFSVQCGDDPTDLEVRCDQCKEWYTSVTNGDAACKYHPSAAGGVCKNCQQPVKGPGCTPSRHKPMVVRGIMSVRKIEVNFIERTLLFDTAVRKKAPTKELQGPSSGLLSENFVPTVCPCTEHYPGELLLSAYGASVQGVYDLMVTDSASLFEELQKDLKYTEIQMQPWTAAGEEMKRNLQYVMPLTGSFGPKQALTKEEQSVKWTTDRKCFIVEAKSTTPDVPYGDTFYNVTRYCVTALGDESCAVRITGDTVFTKKPMVKGMIQKAAFNGAKGYMKNWDDKLLGRTGPPKNLPKSAAAGATGPLLGTAADSAKGERGFLASFASGTQGIVVVVLFFVITAMLFTSFMMYLRISEMENVLLSIEF* # ORIGINAL: g5216.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 14883 21230 . - . ID=g5216;Name=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 14883 21230 . - . ID=g5216.t1;Parent=g5216;Name=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 19989 21230 . - . ID=g5216.t1.exon1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 19989 21230 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 19206 19685 . - . ID=g5216.t1.exon2;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 19206 19685 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 18336 18991 . - . ID=g5216.t1.exon3;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 18336 18991 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 17504 18128 . - . ID=g5216.t1.exon4;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 17504 18128 . - 1 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 17074 17203 . - . ID=g5216.t1.exon5;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 17074 17203 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 16515 16684 . - . ID=g5216.t1.exon6;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 16515 16684 . - 2 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 16100 16246 . - . ID=g5216.t1.exon7;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 16100 16246 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 15754 15929 . - . ID=g5216.t1.exon8;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 15754 15929 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 15453 15597 . - . ID=g5216.t1.exon9;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 15453 15597 . - 1 ID=cds.g5216.t1;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 14883 15245 . - . ID=g5216.t1.exon10;Parent=g5216.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 14883 15245 . - 0 ID=cds.g5216.t1;Parent=g5216.t1 #PROT g5216.t1 g5216 MYPQPRRPFEFHPLAPAPAPGAIMNPQGGQGAEMHGAMPQHYGPPPSQQGHPAAANVAYGPPPPQQAAPQQANMAAAASYQRLKVEDALSYLDQVKLQFGDQPTVYNQFLDIMKEFKSQSIDTPGVIGRVSALFEGHPDLIRGFNTFLPPGYKIEVGIHGTVVQQPSGQSQQILSAAQQAQQAALMASGGGQAPPLGPPQGAQPQHHHHLMSGPMAAPASGVPVAAGAPGAAGGSPPPSSRRPVEFHHAINYVNKIKTRFANQPEIYKQFLEILHTYQKEQRTAKEVHAIKEVYGQVASLFRTHPDLLDEFSQFLPDAVPQGVGAPGAGGKSQPGFVSQGGLFGPSALDLGEYRKGHGAPSVPPSQPIGAAPLAPGAGQQKGSRGYKRNALAAGLPAVAGAPAAAGGAAAPPAKKAKRAAEGGAGSAVTMVNTAAAQRSLAHAEEYAFFDKVKKAINNRQVYDNFLRCLNLYSQEVINKQDLVHLVQGFLGKHADLYDRFKNFVGYKEPAPVSAAATPTGGLHDGLTRSPGFMPSEGPMNVDYSTCKRLGYSYRALPKNLQNQKCTGRTQLCQQVLNDQWVSFPTWSEDTTFLASRKNVYEEAMYKVEDERFELDRVLELVLATIRVFEPIAKRITTMSGDEASKFRLTSTLGGKSEFVHRKAIELMYGARAQEVVEALMRSPAAAIPVVLRRLKQKDDEWRKAQREWNRLWRDVHEQNALKALDYQGIQFKANDKKFMGTKGLIAEVETMLQEEKEKAEEKVDSGSGKKADVNGVASEIAPPKSGKSHFTFKYGPANIFSIIADMVFFRINATGPITARERERVDRLFNNFIPDFFSAGAAAKPKEKIQAEEDAPDGNNNNNNNNPNDAVVSPPNNDEQQKAVATEQAAPAPPASDITEAGQSDVKMEDADEAQGVLPPTGTAAAEATATATEPSIKSESGDETSAAAHAASANSTGLRPINVIGDVSGNLSASQNGRASAAQNVFFGNNPWYCFFRLHQLMYDRVGGIYEAAQKITAEENAKAGKQLPKKDVAMLLGCRNQQNFIRREECWESFLLLTRNFIEGMVEAQVYEDCTREVFTTKAFPIYTIDKLVVNVVRHVMSIVSDENCQRLMSLYDYEKSRGASSEASYQANCEALLGDDNTYRIAFSAATQTLSLQLLDSEQATAVPDGSTVEEKWSNYVDKYVRSETTDSDIERLIKHPVLLRRNKREKDESAVLDGVEMLNNLECKICVNTYKIFYVEGSEDFFHRVAARKSADSAAEEKRKSRFHAWLAEHQDGDRESFDAFLRGEQATCTVHSAPTTTDADGVAVPVSAPTDEPAPSSHTGDAAQDAAGQSLDVESVPVPVPEAAAAADAPVHDESVPKDDEPVAMDTL* # PASA_UPDATE: g5210.t1, single gene model update, valid-1, status:[pasa:asmbl_7337,status:12], valid-1 NODE_445_length_23573_cov_55.6393 . gene 363 2161 . + . ID=g5210;Name=g5210.t1 NODE_445_length_23573_cov_55.6393 . mRNA 363 2161 . + . ID=g5210.t1;Parent=g5210;Name=g5210.t1 NODE_445_length_23573_cov_55.6393 . five_prime_UTR 363 410 . + . ID=g5210.t1.utr5p1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . exon 363 626 . + . ID=g5210.t1.exon1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . CDS 411 626 . + 0 ID=cds.g5210.t1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . exon 745 810 . + . ID=g5210.t1.exon2;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . CDS 745 810 . + 0 ID=cds.g5210.t1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . exon 952 1153 . + . ID=g5210.t1.exon3;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . CDS 952 1153 . + 0 ID=cds.g5210.t1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . exon 1427 1572 . + . ID=g5210.t1.exon4;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . CDS 1427 1572 . + 2 ID=cds.g5210.t1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . exon 1737 2161 . + . ID=g5210.t1.exon5;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . CDS 1737 1991 . + 0 ID=cds.g5210.t1;Parent=g5210.t1 NODE_445_length_23573_cov_55.6393 . three_prime_UTR 1992 2161 . + . ID=g5210.t1.utr3p1;Parent=g5210.t1 #PROT g5210.t1 g5210 MSDAFYIKDRKYGKADVRLVRVTRNGRVHNMKEMRVRALLKLNSIIDYTTGDNKDIIATDSIKNTVYVLAKEVGVASAERFAIILSEHFLKYSQVIATDISIEENVWSRITEDGRPHNHAFTRTSDLVRTAHVTREKGKAMVVQGGVKNLRVMKTTQSGFEGFVRDRYRTLPDTKDRIFNTIVGITYDFNRTEGVDFDGVFDTVLKSTFKEFAGPTETGTYSPSVQNAIHLVQTSVLQQVPQIESVYIEMPNRHCIPFNLAPFGLENNNEVFIGTDEPAGFIQSTLARKVAARL* # ORIGINAL: g5214.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 10688 12237 . - . ID=g5214;Name=g5214.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 10688 12237 . - . ID=g5214.t1;Parent=g5214;Name=g5214.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 12175 12237 . - . ID=g5214.t1.exon1;Parent=g5214.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 12175 12237 . - 0 ID=cds.g5214.t1;Parent=g5214.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 10688 12073 . - . ID=g5214.t1.exon2;Parent=g5214.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 10688 12073 . - 0 ID=cds.g5214.t1;Parent=g5214.t1 #PROT g5214.t1 g5214 MALNRTLLPVRLEAEVCAYLKVYYDRHTKCTRERAGIADDSKEDALASLLAALATPPSLTTFRYNTLKFQSAADAEQRLASFLKSSYDAKGLPVPPVSRHPLLPDILTVPCAGPRTCLQLDKQVVVDVSCGMAILRGADIYAPGVLSAPDGLAGQDVTVVVDLDRRCLKGTKLTRPFDLGTHVTVGNGRLIIARADLYCNTPPRGVAVVMTDPLYDSPSFGSGDGDGELGSLFFLQNAPSAVAAHVLDPQPGERVLDMCAAPGGKAAHIGALMQNKGLLVACERSRPKLQRLVANIESWGITCARVFCADSTRIVDEASVVGGDGAAADALDNSLRSCTTTVVDKKVVFPRGFFDRVLCDVPCSALGQRPQAINPMTLAGLAAHSPYQRKLLAIALKAARPGGIVVYSTCTINPEENEAVVQWALDHNPGLRLDEDTPRWGAMGGLRNCGLRDENVDRVLRFDPVHDPSAIGFFVARFVVPG* # ORIGINAL: g5217.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 22131 23270 . + . ID=g5217;Name=g5217.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 22131 23270 . + . ID=g5217.t1;Parent=g5217;Name=g5217.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 22131 23270 . + . ID=g5217.t1.exon1;Parent=g5217.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 22131 23270 . + 0 ID=cds.g5217.t1;Parent=g5217.t1 #PROT g5217.t1 g5217 MSRRCIDDEGNRNGLPRKRKYDCPTCVYYTVGDSVLRLATSIHVYRTNPAANEAQLSAARVSLLKSNIGEPLFRRTLDEFERRAHSCSPSGHCSDDVRGRIGHACARMGLVECLCCALNVMSDQSGNFETDDLLQSFSKDNPYTEGCNLLIDELIKRGLQGLSQDREDVRFNRRLEAALTHPSCEGLQNYQRLEFLGDAAIGAIASLSIARLHLYAISSGELTLARGRLVCNESLAIRAVLLGIPRLIRFGDKSLEGNAEACKAAHADSLEATFGALVDCGYIAGIVSVWASFGDDAVVPADGASEDALGGGDPFARVTKSFPGSSFVRVGAVGPAHSAVHTVRIVGADGTPIASGAGSSFKKARLAAARAALLTKQDA* # ORIGINAL: g5211.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 2509 4335 . - . ID=g5211;Name=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 2509 4335 . - . ID=g5211.t1;Parent=g5211;Name=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 4221 4335 . - . ID=g5211.t1.exon1;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 4221 4335 . - 0 ID=cds.g5211.t1;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 3452 4072 . - . ID=g5211.t1.exon2;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 3452 4072 . - 2 ID=cds.g5211.t1;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 3107 3280 . - . ID=g5211.t1.exon3;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 3107 3280 . - 2 ID=cds.g5211.t1;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 2509 2837 . - . ID=g5211.t1.exon4;Parent=g5211.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 2509 2837 . - 2 ID=cds.g5211.t1;Parent=g5211.t1 #PROT g5211.t1 g5211 MADPALSPIAAWLCKIGVSAECEDKFKRNGYLTLQDIAERVTSFEQLRACEISENGQICTILNNLPTLRNDLGVMLHRPPAYDGLEGRGTSVISLDIVLPETNQWCDPPLYEVDLSGGAAEKTPFRPHADGGGPSIAVPEQPRRPTVYEHQKGAKFSGLRFILPALAVAVGILLIVSIQETYATATLVGASPLPYQASYRNGTVSMNVTQYGKLSVSIVDSCLEQPYSLTTASGTSYFVNYTCTNTNDFFVSSKVGAAYGFTIVAVIFVSAMAATCLFTILRVPGQRLHLPHVGLNLAFAIGSFIFTAIAYALMTSVIYNNVINSTSPIQGLGWYTELYIVNGQYDAATFTFAASVVGAVVWIALMCMYVIMSRVPHTPDSDEAITIIHLTPVSRQKAANRAALQTQEATSV* # ORIGINAL: g5213.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 8333 10534 . + . ID=g5213;Name=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 8333 10534 . + . ID=g5213.t1;Parent=g5213;Name=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 8333 8850 . + . ID=g5213.t1.exon1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 8333 8850 . + 0 ID=cds.g5213.t1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 8998 9124 . + . ID=g5213.t1.exon2;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 8998 9124 . + 1 ID=cds.g5213.t1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 9231 9567 . + . ID=g5213.t1.exon3;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 9231 9567 . + 0 ID=cds.g5213.t1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 9818 9977 . + . ID=g5213.t1.exon4;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 9818 9977 . + 2 ID=cds.g5213.t1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 10166 10206 . + . ID=g5213.t1.exon5;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 10166 10206 . + 1 ID=cds.g5213.t1;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 10377 10534 . + . ID=g5213.t1.exon6;Parent=g5213.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 10377 10534 . + 2 ID=cds.g5213.t1;Parent=g5213.t1 #PROT g5213.t1 g5213 MVVPTEEAHIRMEPRSTSVGRVIPNPIAAVAPATGSSPRDADSAHKSDAAADNTAASRVIAAASTTTTPLHSGAVAELSSAATVAPDQKESTPASDAVIPMPSIVAPTAVPNKPTINVLSIALFAYIGVLVRVGLTNIAKYGVASAFAVLYPEIVGTLIMGLAVAHKGFIDPRHHPLYVGITTGLCGSITTFSSWNQEASQILVNWTGVETAGYRGIGFVSIIILGFGMPAVSLMFGAHLAHLSPWSDVRRAEDALKKAAEAKKSGDAPTPTSPPIAPQTPPDFYGVSGVEDALIVATYVVATGIVMGVLYDVTRYDLLFDCVFAPLGALLRYWLSGWNARIKSFPLGTFAANIIGCILLAIFNIIPSATNCFSGSSRPKMIYNVFVGLQEGFCGCLTTVSSFANEIRTLGLRDAYIYALTSLVVAQIFMLSINGGYESYNTVQSC* # ORIGINAL: g5215.t1 original gene structure, not modified by PASA NODE_445_length_23573_cov_55.6393 AUGUSTUS gene 12868 14240 . + . ID=g5215;Name=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS mRNA 12868 14240 . + . ID=g5215.t1;Parent=g5215;Name=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 12868 12984 . + . ID=g5215.t1.exon1;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 12868 12984 . + 0 ID=cds.g5215.t1;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 13164 13314 . + . ID=g5215.t1.exon2;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 13164 13314 . + 0 ID=cds.g5215.t1;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 13712 13745 . + . ID=g5215.t1.exon3;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 13712 13745 . + 2 ID=cds.g5215.t1;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 13880 14042 . + . ID=g5215.t1.exon4;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 13880 14042 . + 1 ID=cds.g5215.t1;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS exon 14187 14240 . + . ID=g5215.t1.exon5;Parent=g5215.t1 NODE_445_length_23573_cov_55.6393 AUGUSTUS CDS 14187 14240 . + 0 ID=cds.g5215.t1;Parent=g5215.t1 #PROT g5215.t1 g5215 MAHSAEIYFYIRKSDVEGIRDGTFSVRIKPGWKPEEIKKAFRKAAGIEDSSLTLKLRNNAGAVVPFSPYIAANESHARYLLEAARPYELVKPTAKDINQEKLEAELKKICSEFEQRVLETEKMANEEYLLQLEKEALDDMAAMRSQLAILSRKVAESEEMEWVGTFKKNPLW* # PASA_UPDATE: g3020.t1, single gene model update, valid-1, status:[pasa:asmbl_7216,status:12], valid-1 NODE_4315_length_1833_cov_39.6894_potentialcontaminant . gene 71 876 . + . ID=g3020;Name=g3020.t1 NODE_4315_length_1833_cov_39.6894_potentialcontaminant . mRNA 71 876 . + . ID=g3020.t1;Parent=g3020;Name=g3020.t1 NODE_4315_length_1833_cov_39.6894_potentialcontaminant . five_prime_UTR 71 71 . + . ID=g3020.t1.utr5p1;Parent=g3020.t1 NODE_4315_length_1833_cov_39.6894_potentialcontaminant . exon 71 876 . + . ID=g3020.t1.exon1;Parent=g3020.t1 NODE_4315_length_1833_cov_39.6894_potentialcontaminant . CDS 72 602 . + 0 ID=cds.g3020.t1;Parent=g3020.t1;5_prime_partial=true NODE_4315_length_1833_cov_39.6894_potentialcontaminant . three_prime_UTR 603 876 . + . ID=g3020.t1.utr3p1;Parent=g3020.t1 #PROT g3020.t1 g3020 NLLYDDDANVEEFANITAQLRVKYPDIDYDNDSIPPQPIDPADALKPFDPNQPQDPGVLNAEAVNPSPVKPGRKPKKKHDDNNTTTEEPPVPLSRAGQLTTHSQGHVDGAASGGAGIAQPTGIKLRIAIKSAAIASPAPVVKQEHGRDGGDGIKKESHDDGVTEDVRDEEMEVVVS* # PASA_UPDATE: g13005.t1, single gene model update, valid-1, status:[pasa:asmbl_2184,status:3], valid-1 NODE_1624_length_10143_cov_43.6876 . gene 53 7412 . + . ID=g13005;Name=g13005.t1 NODE_1624_length_10143_cov_43.6876 . mRNA 53 7412 . + . ID=g13005.t1;Parent=g13005;Name=g13005.t1 NODE_1624_length_10143_cov_43.6876 . five_prime_UTR 53 225 . + . ID=g13005.t1.utr5p1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 53 247 . + . ID=g13005.t1.exon1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 226 247 . + 0 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 368 445 . + . ID=g13005.t1.exon2;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 368 445 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 671 742 . + . ID=g13005.t1.exon3;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 671 742 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 860 946 . + . ID=g13005.t1.exon4;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 860 946 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 1173 1262 . + . ID=g13005.t1.exon5;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 1173 1262 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 1422 1493 . + . ID=g13005.t1.exon6;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 1422 1493 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 1709 1780 . + . ID=g13005.t1.exon7;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 1709 1780 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 1935 2006 . + . ID=g13005.t1.exon8;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 1935 2006 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 2183 2257 . + . ID=g13005.t1.exon9;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 2183 2257 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 2490 2573 . + . ID=g13005.t1.exon10;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 2490 2573 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 2913 2984 . + . ID=g13005.t1.exon11;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 2913 2984 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 3286 3366 . + . ID=g13005.t1.exon12;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 3286 3366 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 3586 3666 . + . ID=g13005.t1.exon13;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 3586 3666 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 3852 3929 . + . ID=g13005.t1.exon14;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 3852 3929 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 4086 4163 . + . ID=g13005.t1.exon15;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 4086 4163 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 4339 4443 . + . ID=g13005.t1.exon16;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 4339 4443 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 4641 5408 . + . ID=g13005.t1.exon17;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 4641 5408 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . exon 5557 7412 . + . ID=g13005.t1.exon18;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . CDS 5557 7283 . + 2 ID=cds.g13005.t1;Parent=g13005.t1 NODE_1624_length_10143_cov_43.6876 . three_prime_UTR 7284 7412 . + . ID=g13005.t1.utr3p1;Parent=g13005.t1 #PROT g13005.t1 g13005 MSDSLFADSRAFQRAAISCVSYSKATLQRNVFRGMTGSSITLADTGSKIEILESVFDSNRVDVIVDFNSNYLRVHVSDDIVGILCKLSADFYNNSVTFIARIINFKTVSFEDCNFRGNQANTLIYGSRFSKVQVINSTIEGNDVVLFSDITDDARATFQDVIFAANTVSAGLSQGVRSTATYERCQFTGHVDYSSLLSIGMSSVANITDCSFVGNNAGNFDGNIIKVFGRAHANMVRITVRDNVNIYTCDFREYATVNMYTASFKGNTAVDTGSGLRASGNSHVSLTSVLFQNNTANGAGGTIRAHAYSKIDADNCTFLGNFGVSGGAILASSWSSVSVMSGYFEDNTASDGGGIYARDDALVTFVSSTFRGNRARSGKTSVGDGFGGAARLQHRAIMIVDAVVFEENKSDKDGGAICVDGSASLVTSGCVFFKNEALGMKGGAIYSSGHNSLQLNGSVFQRNRGAFGGGALSVYALKTDDVTCDECVFHGNNAHQGPLFYANNPRVIPAFIQSMIELAADDLSHDLSSSPLFFRLTNAPPSVVYSGETGGQLSFDILDGFGRPTTSSEGNPSLLRLSVAPMLGGYGRARVFGDTVLTVIESHATLSFGLIGDPGEYIVTLSGDGPAAVAGATTIAMRITACPKGMTASYETGLSICVADINVDVCKLHQQNGTLLLESPVTPQRYKTSAIVVISVLSVMLAAEVFSVPHFTSRFARVVRRVQHAANRNLPSAKWNTPNLVRLLFLGLQVLQMHAIVLDADVRSPLVDTSSNVFSSAGLSSFSASFSWYFWVIMSITTLWIAYAAIFIVNGGVKFRTTLAGRAFLFPADYLLQAWVTAGFIPTMLNGMRAFHCRYLPDAAYMAVDGVCSVQCWESTHWAYVVVGAIEMLVFYPLASISSMMWQDLDTTLDVRFRPQFFIVDPILKLFLVILRVFFTEKPIPFLSLVFAINAGYAVYTWHKSPCYVTWVNTVTICAHISAATTSLLLLAASASGVIDVVFAVPAVWVAAVIAMGVFLRWFYPATLFVRLGVTNVKQGRARQLFMSMKGVLRGHSSVTGVSSNISLASLGDPDATPSKLRNDGVEHVKPRLLFGNGSAVQHRPSVGSEMERDAPRTSLVHQQRDLFWKKLMELADAGKINVDVQTALYSTFIHVVDSGTGVALRTSKSDGRGSDVTGHLPEAPGRMEPTLNELALHDEGDDWSQQQPQRDHSALSRHRESAGASDAANMPGSIESENFE* # ORIGINAL: g13006.t1 original gene structure, not modified by PASA NODE_1624_length_10143_cov_43.6876 AUGUSTUS gene 7555 9977 . + . ID=g13006;Name=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS mRNA 7555 9977 . + . ID=g13006.t1;Parent=g13006;Name=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS exon 7555 8420 . + . ID=g13006.t1.exon1;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS CDS 7555 8420 . + 0 ID=cds.g13006.t1;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS exon 8545 8837 . + . ID=g13006.t1.exon2;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS CDS 8545 8837 . + 1 ID=cds.g13006.t1;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS exon 8955 9577 . + . ID=g13006.t1.exon3;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS CDS 8955 9577 . + 2 ID=cds.g13006.t1;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS exon 9738 9977 . + . ID=g13006.t1.exon4;Parent=g13006.t1 NODE_1624_length_10143_cov_43.6876 AUGUSTUS CDS 9738 9977 . + 0 ID=cds.g13006.t1;Parent=g13006.t1 #PROT g13006.t1 g13006 MNVCDGSQKIRTPVGSEIPCQFMMSGPDCAAVDAPLETDLQCIAMTRSLCGNGPPPAIYDEFTLLPLQAIAKEIEMQALVSSEKSVSAIHTAPQSLSTVANDISAWPPIPSCDGNSAGSVVGRSVDISAETQSSETAVSIPFTLSESLATAPQMESVTTSIGGNPGFVAGQSSNVGVAATVLGEAATSKRLPTSMRASSATLSAPAAFEQEDDEPIAPGFIAHLRANGIRSDAFRLGIQCVIGFTLASLFCVVVPLREPFSTNSVWVVLTTLIVIEGTLGSTIRKSIHRILGTALGAIVGYGCLALVLETGTADCVSCDTYKPYLMVSLLAIFSFVMQYCRWIYPKYNYFFSLALITAPMVALGTYVNGSSDPLRYALFRTLTIMIGAGIGLVCGMFVFPVRARSKFVGGLAGCWADLAGLINDIVALAAIVPADASTTNDGAVAESSISAKDALKEHMLSHRKSDASLFLPPNEVTKQAFRERRTLVYGRLKKMAKTLDMEKTLLPSAQGEMRLRYPFVFPGQVYGALLKYTRRLFYIAMTMYYPSQSMESTSPFAADHMPLLDAVRRPVTAFLLSAGNVLREGALSSALTPLLLEIDESILDAILAHQQLRQGDTECAYTTEDVEFFSMMVLSLRQCGAAMKIVHTLLVELERLKKEGKITLHDMELFLGS* # PASA_UPDATE: g10119.t1, single gene model update, valid-1, status:[pasa:asmbl_6350,status:12],[pasa:asmbl_6351,status:12], valid-1 NODE_3644_length_3043_cov_37.6149 . gene 1460 2892 . - . ID=g10119;Name=g10119.t1 NODE_3644_length_3043_cov_37.6149 . mRNA 1460 2892 . - . ID=g10119.t1;Parent=g10119;Name=g10119.t1 NODE_3644_length_3043_cov_37.6149 . five_prime_UTR 2892 2892 . - . ID=g10119.t1.utr5p1;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . exon 2791 2892 . - . ID=g10119.t1.exon1;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . CDS 2791 2891 . - 0 ID=cds.g10119.t1;Parent=g10119.t1;5_prime_partial=true NODE_3644_length_3043_cov_37.6149 . exon 2577 2619 . - . ID=g10119.t1.exon2;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . CDS 2577 2619 . - 1 ID=cds.g10119.t1;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . exon 2255 2298 . - . ID=g10119.t1.exon3;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . CDS 2255 2298 . - 0 ID=cds.g10119.t1;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . exon 1460 1943 . - . ID=g10119.t1.exon4;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . CDS 1823 1943 . - 1 ID=cds.g10119.t1;Parent=g10119.t1 NODE_3644_length_3043_cov_37.6149 . three_prime_UTR 1460 1822 . - . ID=g10119.t1.utr3p1;Parent=g10119.t1 #PROT g10119.t1 g10119 HHHRGNHCSLPLQLCQPGCPLWRAHRLVLHKSIGWSTAAGVVPHHCWMGLVHHVGDRIHSICDGTGESHSGRVPAASEPASHCRAHNGIKRVKVSRQSCIRS* # ORIGINAL: g10118.t1 original gene structure, not modified by PASA NODE_3644_length_3043_cov_37.6149 AUGUSTUS gene 159 886 . - . ID=g10118;Name=g10118.t1 NODE_3644_length_3043_cov_37.6149 AUGUSTUS mRNA 159 886 . - . ID=g10118.t1;Parent=g10118;Name=g10118.t1 NODE_3644_length_3043_cov_37.6149 AUGUSTUS exon 313 886 . - . ID=g10118.t1.exon1;Parent=g10118.t1 NODE_3644_length_3043_cov_37.6149 AUGUSTUS CDS 313 886 . - 0 ID=cds.g10118.t1;Parent=g10118.t1 NODE_3644_length_3043_cov_37.6149 AUGUSTUS exon 159 211 . - . ID=g10118.t1.exon2;Parent=g10118.t1 NODE_3644_length_3043_cov_37.6149 AUGUSTUS CDS 159 211 . - 2 ID=cds.g10118.t1;Parent=g10118.t1 #PROT g10118.t1 g10118 MAGSRKGRRPNKRKLEETVDDAVDTTDSNVVITVDEPEDGTQSGVEPSSPKIKTTPPPAVQKTVPEVAPMVISVTDESQVGSKAPPTDRVDVSRIVPSVDSPVPSIVVGATIDQGTETQHSQPPSELLAQSQDQAMATVAAVEASMDASTTTPRRSSKKGTARKRARVSPGGTEGASSPSGNSKRRSVAAEDYDAIHKNLKRQLRFLIY # PASA_UPDATE: g13636.t1, single gene model update, valid-1, status:[pasa:asmbl_6095,status:12], valid-1 NODE_3464_length_3411_cov_41.9649 . gene 186 1754 . - . ID=g13636;Name=g13636.t1 NODE_3464_length_3411_cov_41.9649 . mRNA 186 1754 . - . ID=g13636.t1;Parent=g13636;Name=g13636.t1 NODE_3464_length_3411_cov_41.9649 . five_prime_UTR 1577 1754 . - . ID=g13636.t1.utr5p1;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . exon 1537 1754 . - . ID=g13636.t1.exon1;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . CDS 1537 1576 . - 0 ID=cds.g13636.t1;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . exon 940 1159 . - . ID=g13636.t1.exon2;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . CDS 940 1159 . - 2 ID=cds.g13636.t1;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . exon 656 758 . - . ID=g13636.t1.exon3;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . CDS 656 758 . - 1 ID=cds.g13636.t1;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . exon 186 277 . - . ID=g13636.t1.exon4;Parent=g13636.t1 NODE_3464_length_3411_cov_41.9649 . CDS 186 277 . - 0 ID=cds.g13636.t1;Parent=g13636.t1;3_prime_partial=true #PROT g13636.t1 g13636 MRPLVPTLYTARPVVSLLSPQRAMSSSTSSAVAPSPASVSPLNPQGFTKWTGGALTSAGRGGRSSVSGVLATVFGASGFLGRYVVNRLGRNGSQVIVPYRGEEYDVGHLKPMGDLGQITFREYHLKDDASLAKMVQYSNVVINLIGSDYET # ORIGINAL: g13637.t1 original gene structure, not modified by PASA NODE_3464_length_3411_cov_41.9649 AUGUSTUS gene 2215 3222 . + . ID=g13637;Name=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS mRNA 2215 3222 . + . ID=g13637.t1;Parent=g13637;Name=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS exon 2215 2391 . + . ID=g13637.t1.exon1;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS CDS 2215 2391 . + 0 ID=cds.g13637.t1;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS exon 2538 2680 . + . ID=g13637.t1.exon2;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS CDS 2538 2680 . + 0 ID=cds.g13637.t1;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS exon 2787 2877 . + . ID=g13637.t1.exon3;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS CDS 2787 2877 . + 1 ID=cds.g13637.t1;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS exon 3037 3222 . + . ID=g13637.t1.exon4;Parent=g13637.t1 NODE_3464_length_3411_cov_41.9649 AUGUSTUS CDS 3037 3222 . + 0 ID=cds.g13637.t1;Parent=g13637.t1 #PROT g13637.t1 g13637 MAAAHNEGHGFRFSIDRGGTFTDIYAQCPGGKVRVYKLLSVDPAYPDAPREGIRRILQEETGIAHPPDAPLDTSRIEWIRMGTTVATNALLERKGEPTALVITKGFRELLHIGNQSRPKIFDLQIRVPELLYEHVIEVDERVTVVSPGDKVCHPGSVVKGVTGEDIYVMKVGKADGAHCPIRAISTRTVSSRGPRGCC* # PASA_UPDATE: g8084.t1, single gene model update, valid-1, status:[pasa:asmbl_5916,status:12], valid-1 NODE_3354_length_3663_cov_37.2023 . gene 285 3386 . - . ID=g8084;Name=g8084.t1 NODE_3354_length_3663_cov_37.2023 . mRNA 285 3386 . - . ID=g8084.t1;Parent=g8084;Name=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 3213 3386 . - . ID=g8084.t1.exon1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 3213 3386 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 2733 2753 . - . ID=g8084.t1.exon2;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 2733 2753 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 2478 2528 . - . ID=g8084.t1.exon3;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 2478 2528 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 2107 2204 . - . ID=g8084.t1.exon4;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 2107 2204 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 1599 1851 . - . ID=g8084.t1.exon5;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 1599 1851 . - 1 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 1283 1390 . - . ID=g8084.t1.exon6;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 1283 1390 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . exon 285 857 . - . ID=g8084.t1.exon7;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . CDS 603 857 . - 0 ID=cds.g8084.t1;Parent=g8084.t1 NODE_3354_length_3663_cov_37.2023 . three_prime_UTR 285 602 . - . ID=g8084.t1.utr3p1;Parent=g8084.t1 #PROT g8084.t1 g8084 MLAFMKEISSDGDVSTVDVVYPASPFLIHLAPELLKLTLMPLMYYANNETSVPYNLAWAPHHLGQWPICDIRPEEQEQMPVEETANMLAMFAAIVIVDKNSTGFLDGYWDILQTWGDYLVDNLPDPGNQLCTDDFEGPSPHNVNLAAKGVIGLAAYSILLETAGKASRDNKYFTAAVEYAQQWIKLADDGDHTRLQYDEANTWSLKYNLLFHEMLQMGIFPRWLIDRDLDFYFSKANTFGVPLDSRASFTKTDWELWVGAIASNDQFASLVDLVYLFAHTTTDRVAFTDWYETDTARQKGFQARPVIGGIYARLLMVGR* # PASA_UPDATE: g8242.t1, single gene model update, valid-1, status:[pasa:asmbl_4239,status:12], valid-1 NODE_2407_length_6397_cov_43.5278 . gene 1982 5819 . + . ID=g8242;Name=g8242.t1 NODE_2407_length_6397_cov_43.5278 . mRNA 1982 5819 . + . ID=g8242.t1;Parent=g8242;Name=g8242.t1 NODE_2407_length_6397_cov_43.5278 . exon 1982 5819 . + . ID=g8242.t1.exon1;Parent=g8242.t1 NODE_2407_length_6397_cov_43.5278 . CDS 1982 5428 . + 0 ID=cds.g8242.t1;Parent=g8242.t1 NODE_2407_length_6397_cov_43.5278 . three_prime_UTR 5429 5819 . + . ID=g8242.t1.utr3p1;Parent=g8242.t1 #PROT g8242.t1 g8242 MRDKMTELPRKRRQRDDDGDDDEKVEPAPAQETPQVKRKVKRPRLQAHDPTGASHHEEDDADGLPAAPGQQLPLPSMIPKARTTPTGASNGGALQIRLRIGSDVANAAAEGERRTAPSGPQQRMEGVESAGRQVGRPEGGKANPVLRLSVPNARTVSANGTLAAGSETTGAGSTANLEAAIRATIQRPTQRPQIERREPAAAQSVDRVQNGASMFSFFWNNEEDAEEQSAPMAAANGPTALPIAPALSTVRALSPVRAQVIAPPIVMRKPAPTPAPPTKSKKQNEQRPEGTAENEEGGAPSSDESGRLPATAGKRAYKAEMRVDGTAVFATTPVLSMPSVFPTPAKWLQLTADAPPETLDGGILAMCFTQLDRGSDTVVQARIRTCIVCTAAASAEISCCDVCGVVMCDACLSDRAVALLNSGLRGPPLQCTSACGRTTPTVAVIGAMTRTAESYRQTQGEEAATALIDAAARYKSRVLAHRLTVAAASSAMPRFQEEITGNVRRVTACPAKGCGLVHVMASSITGSDSARDPFRGFLFGSVRHDNAHYSDRAAPLLITCGCGGQLCTGCGELVGEPRAKETHIRDCAQQCHVSETYARNAMHLKQMIAREPDSGAGSLTQGLAASFSRILLEATSIKCPWCVEDGRDVHPGRKDDQCVNMTCEECGRGWCYACRRKVLPNGYEHVHAFYASHREAETKRMAYERSGGALRTLADVEKCWTTVVPAEPRLGVIDGGMVLPGHNANLSAAMCSAYAPALKSSCPQYLTKYAYLPMATAVDGPAGDAARLHNAAIRAYRAAIHRADTKKQRSRRSAVAVAGETDPSDMYYDGGDDATVAGDGSEHFLLLNLDPTMTDTGDVQRTMKMLVRKCFHKYTQSNGTPKQSIRNSACIDDTHVVPPNQQTLEVAATQARESLASHVGAAIRGMRRHGNEDISAIVAEFVRRAQDQLNVLIGLHMQPQWSTEAAAAIAALLNERIEAYSAARFAQRRRSEHAECVRSAFGQLGAILTPTRTPSALKHGSWTSRRDYAIALFGQMLHAVDRADDVQAVVVTGPVPRIAINRKRTIFTDDLPDTDPERACLQVYHDIALHRVISRFCGTLGVDAMRKVLAAAPGHVRDTVRAVGNRFRDLFGDAATFAALSARPAQDV* # PASA_UPDATE: g8241.t1, single gene model update, valid-1, status:[pasa:asmbl_4238,status:12], valid-1 NODE_2407_length_6397_cov_43.5278 . gene 398 1292 . - . ID=g8241;Name=g8241.t1 NODE_2407_length_6397_cov_43.5278 . mRNA 398 1292 . - . ID=g8241.t1;Parent=g8241;Name=g8241.t1 NODE_2407_length_6397_cov_43.5278 . five_prime_UTR 1222 1292 . - . ID=g8241.t1.utr5p1;Parent=g8241.t1 NODE_2407_length_6397_cov_43.5278 . exon 628 1292 . - . ID=g8241.t1.exon1;Parent=g8241.t1 NODE_2407_length_6397_cov_43.5278 . CDS 628 1221 . - 0 ID=cds.g8241.t1;Parent=g8241.t1 NODE_2407_length_6397_cov_43.5278 . exon 398 505 . - . ID=g8241.t1.exon2;Parent=g8241.t1 NODE_2407_length_6397_cov_43.5278 . CDS 398 505 . - 0 ID=cds.g8241.t1;Parent=g8241.t1;3_prime_partial=true #PROT g8241.t1 g8241 MAHLLGLSREELVNRILQLEHETASMKEDAASFFTSSIDGRPASGVAAFYTADAREDVPQSQPCAAVELPVAPAAIAAITPTHTLPTTVNNSSDNTVQQHTGAQKDSSIAIDFAGTGSGATARNDGVDGDAREEDNGDGSRKRKRLSRKESKANREDSKRSFDFSRFHQRQIALRIAYLGWDYWGLAQSSNPADNSIETNLFRALQQACLVGDIASANYSRCGRTDRGVSALGQ # ORIGINAL: g6808.t1 original gene structure, not modified by PASA NODE_1646_length_10025_cov_41.7177 AUGUSTUS gene 2935 3723 . + . ID=g6808;Name=g6808.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS mRNA 2935 3723 . + . ID=g6808.t1;Parent=g6808;Name=g6808.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS exon 2935 3723 . + . ID=g6808.t1.exon1;Parent=g6808.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS CDS 2935 3723 . + 0 ID=cds.g6808.t1;Parent=g6808.t1 #PROT g6808.t1 g6808 MALIETLYYAAVEDSVDVLGRFRHLDLHVDRLCASALKLAFPVTPDPAKLRRILAECDARWQNSSRFQGTDGRVRISYSRNGEWSVDDWPIARAAPPILTIAKALEMSLNPLNVVIDPGAPSFKDARDPLLLNKTSQRGVYDAARARAGICPVGVGVSGAGSSGSGSVFDVVLVGPDDYVTECSIANIAVEVVPGGGRFVTPPLSDGLLPGVMRRILLASESDMLFEDHITRTNLETAAAQNRRIICFNSLRGVYLVTLILL* # ORIGINAL: g6810.t1 original gene structure, not modified by PASA NODE_1646_length_10025_cov_41.7177 AUGUSTUS gene 8334 9516 . - . ID=g6810;Name=g6810.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS mRNA 8334 9516 . - . ID=g6810.t1;Parent=g6810;Name=g6810.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS exon 9394 9516 . - . ID=g6810.t1.exon1;Parent=g6810.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS CDS 9394 9516 . - 0 ID=cds.g6810.t1;Parent=g6810.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS exon 8334 9098 . - . ID=g6810.t1.exon2;Parent=g6810.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS CDS 8334 9098 . - 0 ID=cds.g6810.t1;Parent=g6810.t1 #PROT g6810.t1 g6810 MKHWSDFCRAIVKQQNRIEKENADIEEDRMGENAKLAKLKRMKENGGKDPEEGYYMHVTLASPDPVKLASLVGAMMSNREQSPPIAEKRKKLVRAQYKRGNFASYEDDGLEDEFSDEEGSPTGSPVTATVLPALQRRASTVIGGAEVAPNTIRYSAASSGDDSGSRPASSADPTLPPMGRPRRSSSSADLESRLVRRGSLFKATEDAVQSTQRRLSFVGRPSALKLAGSPPAASAGSTTAPPTPGGQAPVLPAAKMLRRGSRMSTGSMAASGADAGAAAAAVVGSGPGGKLPSVG* # PASA_UPDATE: g6807.t1, single gene model update, valid-1, status:[pasa:asmbl_2230,status:12], valid-1 NODE_1646_length_10025_cov_41.7177 . gene 156 2538 . - . ID=g6807;Name=g6807.t1 NODE_1646_length_10025_cov_41.7177 . mRNA 156 2538 . - . ID=g6807.t1;Parent=g6807;Name=g6807.t1 NODE_1646_length_10025_cov_41.7177 . five_prime_UTR 2369 2538 . - . ID=g6807.t1.utr5p1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . exon 2299 2538 . - . ID=g6807.t1.exon1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . CDS 2299 2368 . - 0 ID=cds.g6807.t1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . exon 2078 2136 . - . ID=g6807.t1.exon2;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . CDS 2078 2136 . - 2 ID=cds.g6807.t1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . exon 1487 1646 . - . ID=g6807.t1.exon3;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . CDS 1487 1646 . - 0 ID=cds.g6807.t1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . exon 825 936 . - . ID=g6807.t1.exon4;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . CDS 825 936 . - 2 ID=cds.g6807.t1;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . exon 156 319 . - . ID=g6807.t1.exon5;Parent=g6807.t1 NODE_1646_length_10025_cov_41.7177 . CDS 156 319 . - 1 ID=cds.g6807.t1;Parent=g6807.t1;3_prime_partial=true #PROT g6807.t1 g6807 MAASTDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVFDITNRNSFLQTTKWIDDVRTERGNDVIIMLVGNKTDLADKRQVSIEEGEKKAKEMNVMFIETSAKAGYNVKQLFRRVAAALPGMENSLETGNQED # ORIGINAL: g6809.t1 original gene structure, not modified by PASA NODE_1646_length_10025_cov_41.7177 AUGUSTUS gene 5223 6923 . + . ID=g6809;Name=g6809.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS mRNA 5223 6923 . + . ID=g6809.t1;Parent=g6809;Name=g6809.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS exon 5223 6923 . + . ID=g6809.t1.exon1;Parent=g6809.t1 NODE_1646_length_10025_cov_41.7177 AUGUSTUS CDS 5223 6923 . + 0 ID=cds.g6809.t1;Parent=g6809.t1 #PROT g6809.t1 g6809 MAPSIQTSPTALRLAPTATTGATQPPTPTCGPDTLTGVTQTTLLSSVLNLKDSERKISSTDCHRHSSENSHVDAVELQSVANRDSPTDDAIDSCEPTALSNSLADESGVEQQPQQQTAITMKRAAGMRQFYAISSTYLVFTLTDAALRLIVLLQANDNGFSAFQIALMFTLYEAFGVLTNFGGGILASRAGLRVTLVIGLLCELASLAMLMPFRRLSDWEDMLGSRTDRVVYIMFAQSLAGIAKDLVKVAGKSVAKLVTGSSDDSRLFKLVVMLTGLKNEVKGLGYFFGTFLFRVAGFLASLVTLAVLLCAVMPAVLLLVPSNLGRSTRKINWPAVFRKSREFNVLCVARLFLFGSRDIWFEVALPIFVKNVIAWPSLVVGSILAGWTILYGLVQSNTKNIALQPLGIFPPHGRHLVPFSAALTALVVVLASVLTATDHLRSIPATASALLVGLAVYAVLFAINSSVHSYLVVLYSDHDKVAMDVGFYYMANAFGRLLGTLIGGVLYSFYDKGGGGGNSGPPEYDVQARMDSFTACMWGSAVFMGIATFASMWLPRHREKPSGQEQ* # PASA_UPDATE: g9340.t1, single gene model update, valid-1, status:[pasa:asmbl_5434,status:13],[pasa:asmbl_5435,status:12], valid-1 NODE_3022_length_4517_cov_31.2175 . gene 3771 4494 . - . ID=g9340;Name=g9340.t1 NODE_3022_length_4517_cov_31.2175 . mRNA 3771 4494 . - . ID=g9340.t1;Parent=g9340;Name=g9340.t1 NODE_3022_length_4517_cov_31.2175 . five_prime_UTR 4490 4494 . - . ID=g9340.t1.utr5p1;Parent=g9340.t1 NODE_3022_length_4517_cov_31.2175 . exon 4183 4494 . - . ID=g9340.t1.exon1;Parent=g9340.t1 NODE_3022_length_4517_cov_31.2175 . CDS 4183 4489 . - 0 ID=cds.g9340.t1;Parent=g9340.t1 NODE_3022_length_4517_cov_31.2175 . exon 3771 4108 . - . ID=g9340.t1.exon2;Parent=g9340.t1 NODE_3022_length_4517_cov_31.2175 . CDS 3900 4108 . - 2 ID=cds.g9340.t1;Parent=g9340.t1 NODE_3022_length_4517_cov_31.2175 . three_prime_UTR 3771 3899 . - . ID=g9340.t1.utr3p1;Parent=g9340.t1 #PROT g9340.t1 g9340 MLVGGSEEPSVERLAAHSLVLSTRSDYFRAMFSAGGIASGASGGQWREHSDGCVRVPDHSPRVFECALEYLYTGAISAESLFADGPATCAQLLLLADKYGIEGIRASCEILLLPIITVDNVCILCDAADRANAARLRSQCIIYMWVILSLFWSLMGSSTFTRQTPLLSWKF* # PASA_UPDATE: g9338.t1, single gene model update, valid-1, status:[pasa:asmbl_5436,status:12], valid-1 NODE_3022_length_4517_cov_31.2175 . gene 223 975 . + . ID=g9338;Name=g9338.t1 NODE_3022_length_4517_cov_31.2175 . mRNA 223 975 . + . ID=g9338.t1;Parent=g9338;Name=g9338.t1 NODE_3022_length_4517_cov_31.2175 . five_prime_UTR 223 227 . + . ID=g9338.t1.utr5p1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . exon 223 299 . + . ID=g9338.t1.exon1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . CDS 228 299 . + 0 ID=cds.g9338.t1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . exon 504 590 . + . ID=g9338.t1.exon2;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . CDS 504 590 . + 0 ID=cds.g9338.t1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . exon 675 707 . + . ID=g9338.t1.exon3;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . CDS 675 707 . + 0 ID=cds.g9338.t1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . exon 817 975 . + . ID=g9338.t1.exon4;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . CDS 817 882 . + 0 ID=cds.g9338.t1;Parent=g9338.t1 NODE_3022_length_4517_cov_31.2175 . three_prime_UTR 883 975 . + . ID=g9338.t1.utr3p1;Parent=g9338.t1 #PROT g9338.t1 g9338 MTDVMVFKTFMLIRMGGPNLEIFKFGVYAFFPVLVFYVINRPEFYNTYVAPTKAEAFPSVRQDDKLPTDLVSLRAHREALIRKHF* # ORIGINAL: g9339.t1 original gene structure, not modified by PASA NODE_3022_length_4517_cov_31.2175 AUGUSTUS gene 1552 2901 . + . ID=g9339;Name=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS mRNA 1552 2901 . + . ID=g9339.t1;Parent=g9339;Name=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS exon 1552 1873 . + . ID=g9339.t1.exon1;Parent=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS CDS 1552 1873 . + 0 ID=cds.g9339.t1;Parent=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS exon 2245 2645 . + . ID=g9339.t1.exon2;Parent=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS CDS 2245 2645 . + 2 ID=cds.g9339.t1;Parent=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS exon 2722 2901 . + . ID=g9339.t1.exon3;Parent=g9339.t1 NODE_3022_length_4517_cov_31.2175 AUGUSTUS CDS 2722 2901 . + 0 ID=cds.g9339.t1;Parent=g9339.t1 #PROT g9339.t1 g9339 MSELDPLHDMEAAQVVQPDFRHLGMLVPAGDEDGQLCPTSDRDLDFSANGKGDSDNSEDGSDALDDASVAAETIWSRDIEDAFEEALAIYPPCGRRKIILSEDGQMYGGPDGTHGHMSPRGCVVPDKSTSSDAQLGLASHGLSTPGSGVAIPHTQSSLAWEHAQAFSLVPTSPIDTGVNTPRSAVSPAAASGGLNSQWHPCLFSLGNLPKAGIDGSEAPRVMLRSFALFVDPNPSGSPTHLQADKRYYILQMDEAPSHEEINSVEMRNVADKFPGICDVVASHPRAAYYLVKFWVRNPHE* # PASA_UPDATE: g7481.t1, single gene model update, valid-1, status:[pasa:asmbl_4898,status:12], valid-1 NODE_2727_length_5305_cov_36.9719 . gene 111 5117 . + . ID=g7481;Name=g7481.t1 NODE_2727_length_5305_cov_36.9719 . mRNA 111 5117 . + . ID=g7481.t1;Parent=g7481;Name=g7481.t1 NODE_2727_length_5305_cov_36.9719 . five_prime_UTR 111 111 . + . ID=g7481.t1.utr5p1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 111 208 . + . ID=g7481.t1.exon1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 112 208 . + 0 ID=cds.g7481.t1;Parent=g7481.t1;5_prime_partial=true NODE_2727_length_5305_cov_36.9719 . exon 509 627 . + . ID=g7481.t1.exon2;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 509 627 . + 2 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 912 1058 . + . ID=g7481.t1.exon3;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 912 1058 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 1330 1416 . + . ID=g7481.t1.exon4;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 1330 1416 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 1606 1686 . + . ID=g7481.t1.exon5;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 1606 1686 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 1960 2121 . + . ID=g7481.t1.exon6;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 1960 2121 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 2442 2621 . + . ID=g7481.t1.exon7;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 2442 2621 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 2861 2985 . + . ID=g7481.t1.exon8;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 2861 2985 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 3150 3230 . + . ID=g7481.t1.exon9;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 3150 3230 . + 1 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 3395 3509 . + . ID=g7481.t1.exon10;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 3395 3509 . + 1 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 3656 3817 . + . ID=g7481.t1.exon11;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 3656 3817 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 4011 4151 . + . ID=g7481.t1.exon12;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 4011 4151 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 4386 4502 . + . ID=g7481.t1.exon13;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 4386 4502 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 4740 4829 . + . ID=g7481.t1.exon14;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 4740 4829 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . exon 4968 5117 . + . ID=g7481.t1.exon15;Parent=g7481.t1 NODE_2727_length_5305_cov_36.9719 . CDS 4968 5117 . + 0 ID=cds.g7481.t1;Parent=g7481.t1 #PROT g7481.t1 g7481 QTTDVLKLLASLLHLGNVDFITSGGAQIANRDAVDAAASMLSVDVDQLCDNLIAKTMTLRGESITTPLSVQQAEESRDSLAMALYSRVFTWIIARINASISSKESFLSIGVLDIFGFENFKVNSFEQMCINYANEKLQQYFNKHIFSLEQLEYQREGINWADIDWVDNGECLELIEMKLGLLSLLDEESRFPKGTDQTMLAKFHERHEKHKYYLKPRLEKTTFGIKHYAGDVYYETAGFLEKNRDTFRDDLIVLLHESKSDFVYDLFENDAPADSAKATARKKPTVSAQFKDSLSHLMTTLGTSNPFFVRCIKPNMKKIKDAFEAPIALNQLRYSGMLETVRIRRAGYPVRREFKDFLFRYRVLGRTLGLKGELPEQCKRLLAQYDKDSKDWQIGKTKVFLRESLETILEKKRASELEEVSRIIKRKILTYVLRTRFKKLRKAAITFQRIFKGRRARRSFKKQRAAAIKIQTIWRGYSARKLRKRLLEEKRKAEERKREEERRREEERQREMDSLRQQNKLRELEEMQRKAREEQEEKVRKEAAEKAQMVEAAAKATELSHELDAKRSAEEERKRQEEEAKRRAEEETKRQAVRDGMMASWHHGMMECAAMLDWLCD* # ORIGINAL: g2918.t1 original gene structure, not modified by PASA NODE_5402_length_870_cov_72.2541_potentialcontaminant AUGUSTUS gene 82 870 . + . ID=g2918;Name=g2918.t1 NODE_5402_length_870_cov_72.2541_potentialcontaminant AUGUSTUS mRNA 82 870 . + . ID=g2918.t1;Parent=g2918;Name=g2918.t1 NODE_5402_length_870_cov_72.2541_potentialcontaminant AUGUSTUS exon 82 870 . + . ID=g2918.t1.exon1;Parent=g2918.t1 NODE_5402_length_870_cov_72.2541_potentialcontaminant AUGUSTUS CDS 82 870 . + 0 ID=cds.g2918.t1;Parent=g2918.t1 #PROT g2918.t1 g2918 IVCTDCQVVVGDMTFDATTNPQLYGQPGGTILGNIVCIRGSMKTTTFARLLAWRQSKGDDYRFAGPFKTIDQVCHANGIQKIVSDATKAVYKDMVQNFPNKPLIKRGDCRHGLIAACLKVASTQLDHPLSDKHILLMFPNVSIKNYNDGIRTYNEYNPMYNPTVLPSRFLPTIYNSLSDDWGDTEASDEEIRSICGAVCEAIEASGVVEGSVPLVVAVAIVTTIITKLTPPPKDKKLIRTKQTGIIAKSIATRCKLDDKTVHT # ORIGINAL: g4992.t1 original gene structure, not modified by PASA NODE_3232_length_3948_cov_41.2365 AUGUSTUS gene 67 1833 . - . ID=g4992;Name=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS mRNA 67 1833 . - . ID=g4992.t1;Parent=g4992;Name=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 1822 1833 . - . ID=g4992.t1.exon1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 1822 1833 . - 0 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 1609 1716 . - . ID=g4992.t1.exon2;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 1609 1716 . - 0 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 1365 1482 . - . ID=g4992.t1.exon3;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 1365 1482 . - 0 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 984 1109 . - . ID=g4992.t1.exon4;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 984 1109 . - 2 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 680 760 . - . ID=g4992.t1.exon5;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 680 760 . - 2 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 391 493 . - . ID=g4992.t1.exon6;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 391 493 . - 2 ID=cds.g4992.t1;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS exon 67 127 . - . ID=g4992.t1.exon7;Parent=g4992.t1 NODE_3232_length_3948_cov_41.2365 AUGUSTUS CDS 67 127 . - 1 ID=cds.g4992.t1;Parent=g4992.t1 #PROT g4992.t1 g4992 MAHNSPALMLSPLGNGGAAVKDADTLRREADELEAVVDSKVYRAWMNSVFSRHDVDIEIKDISTDLRDGIALVALLGRLVEEKIVPKGHKGPQSFAENVEHIGIVVNYLLEAGVRSSFDAHAIANGDLKQTLRLVHAIFLRWDCLIIAGGVSPTSTGEKEKKRYLLNWVSSVAGVRADDFTTSLKDGIVLQRLIAACVGEDYE # ORIGINAL: g13934.t1 original gene structure, not modified by PASA NODE_2002_length_8151_cov_39.2172 AUGUSTUS gene 5577 8044 . - . ID=g13934;Name=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS mRNA 5577 8044 . - . ID=g13934.t1;Parent=g13934;Name=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 7785 8044 . - . ID=g13934.t1.exon1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 7785 8044 . - 0 ID=cds.g13934.t1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 7329 7448 . - . ID=g13934.t1.exon2;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 7329 7448 . - 1 ID=cds.g13934.t1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 6976 7098 . - . ID=g13934.t1.exon3;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 6976 7098 . - 1 ID=cds.g13934.t1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 6719 6836 . - . ID=g13934.t1.exon4;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 6719 6836 . - 1 ID=cds.g13934.t1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 6439 6550 . - . ID=g13934.t1.exon5;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 6439 6550 . - 0 ID=cds.g13934.t1;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS exon 5577 6310 . - . ID=g13934.t1.exon6;Parent=g13934.t1 NODE_2002_length_8151_cov_39.2172 AUGUSTUS CDS 5577 6310 . - 2 ID=cds.g13934.t1;Parent=g13934.t1 #PROT g13934.t1 g13934 LNTRCDPGDEHHIVRLQSDFVFRDHLCLVFELLGVNFFELLKQNNFHGLSMNLIRTFLAQMLDALVVLAGAGIVHCDLKPENILLKNFSSPDIKVIDFGSACFEQQTVYTYIQSRFYRSPEVLLGLPYGGQIDMWSLGCICAELFLGLPIFPGSSEYDQLSRIVDVIGLPPTHMLDRGKSTSKFFVRQSDLSGNAAYALKSREQYAKETKTAEKPSKKYFDITCIHDIVECGFRKEVPDSDRAKDSELRRVFAHFLSGVLCADPSRRWTPAEAVQHPFVTGRAFDGHFVPVPRRPWPSSGGGQRPGTLGTHATQLTQAMQVTQAMQVMQALPSQAPQMAQLARSQHPTMSPLFGLTHVSSPPDTQPHDSNCAGFQMPRHRAHSVASSASSAASTYFPPYSGGGAPMGAGAYGIPAPYGSLGFSFHAGSHMGSHPGSAHVMGSQPHSQAAAGSLPGSGVDIPAASHPIAIGGSPSRYAQAVWERCLRRL* # PASA_UPDATE: g13932.t1, single gene model update, valid-1, status:[pasa:asmbl_3250,status:12], valid-1 NODE_2002_length_8151_cov_39.2172 . gene 48 4186 . + . ID=g13932;Name=g13932.t1 NODE_2002_length_8151_cov_39.2172 . mRNA 48 4186 . + . ID=g13932.t1;Parent=g13932;Name=g13932.t1 NODE_2002_length_8151_cov_39.2172 . five_prime_UTR 48 48 . + . ID=g13932.t1.utr5p1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . exon 48 490 . + . ID=g13932.t1.exon1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 49 490 . + 0 ID=cds.g13932.t1;Parent=g13932.t1;5_prime_partial=true NODE_2002_length_8151_cov_39.2172 . exon 624 689 . + . ID=g13932.t1.exon2;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 624 689 . + 2 ID=cds.g13932.t1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . exon 866 2644 . + . ID=g13932.t1.exon3;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 866 2644 . + 2 ID=cds.g13932.t1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . exon 2832 3016 . + . ID=g13932.t1.exon4;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 2832 3016 . + 2 ID=cds.g13932.t1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . exon 3291 3498 . + . ID=g13932.t1.exon5;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 3291 3498 . + 0 ID=cds.g13932.t1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . exon 3684 4186 . + . ID=g13932.t1.exon6;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . CDS 3684 3901 . + 2 ID=cds.g13932.t1;Parent=g13932.t1 NODE_2002_length_8151_cov_39.2172 . three_prime_UTR 3902 4186 . + . ID=g13932.t1.utr3p1;Parent=g13932.t1 #PROT g13932.t1 g13932 SAPLPAKRSVSIGGPPMSAASPMATLSRHVPESYGYSQQHEEPYGTSGSVAQRGSTSDASYYPSFTGRGAPQEGASVSSSSSSSRRLSSHSWDDVRRQSDGGASEGDAGDVRLSRTAPQRPVTGDGTPMPFKAKMARPKSVPKDAVRDSRIISDATENGDVYEDARQPEDMAGKIASIKRKALERSLTEDNKDRSPSPPKATKAVSRPPESPAIARAQTERLREKENRDRDKDKDREVAKERRRDEEREREKDAPAPRSLAPPHSHSRGPANFDDVVVGRSTRPFEVSEYPPGMSHPAPASADHPPPKQRASTSTTGTPRAHPPPLQDKSDRPERYERHHEPPPPPQAAAHTPPPLAKTTASRLQHKSAPLAGAGRERRPSVDAVDDDPPPDRKRGKSGSHVDPPPARRATLERSESLPMNIARPADELLFEELEAFSSPEKELTRALACLRVTDDWEQQCDALTTIRRLSAHHAEVLTTELAAVLAAVKNEAKNLRSSVAKNALVCFSDLFQGLGRAMESDIDATVQTLLKKACESNAFLCELVDRALASMITHVPSNRPLFALLANAQHKNPNVRNTASHFVAEALASLAASRQLGQKEIDRALPTIREFVADSGPETRYNARRALLMIAQAPSGDRLLARHLDGTANNKLRELVDSLRVKGLGDKPAGVTTATPRRARTTSSGGELTVVGNGNDSAAFGSSYGADSASAHAGGLSSAAKGDRAPVGRKPSAATSKGSASGREPAEFGSLPEILTNLASNDFRQRMDALIAVTDIIERYPSEIAATQLTRVFDAFVPRLTDVNSKVNVFALQCFLRIVPTMRELVDGVLNAVIPALGANLSSANPVIRGLAGEVLDALNEYAGHGNLVQSLAQVAHHSNTRVKPALVEKLADLIGAIHSKRPNLIVKYVLPLAFDLMNEQKGDIKVSGSRLLQELYNTMGPAIYEHASRLSDQNLTKLKKILG* # ORIGINAL: g13933.t1 original gene structure, not modified by PASA NODE_2002_length_8151_cov_39.2172 . gene 4172 5548 . - . ID=g13933;Name=g13933.t1 NODE_2002_length_8151_cov_39.2172 . mRNA 4172 5548 . - . ID=g13933.t1;Parent=g13933;Name=g13933.t1 NODE_2002_length_8151_cov_39.2172 . exon 4172 5548 . - . ID=g13933.t1.exon1;Parent=g13933.t1 NODE_2002_length_8151_cov_39.2172 . CDS 4322 5548 . - 0 ID=cds.g13933.t1;Parent=g13933.t1 NODE_2002_length_8151_cov_39.2172 . three_prime_UTR 4172 4321 . - . ID=g13933.t1.utr3p1;Parent=g13933.t1 #PROT g13933.t1 g13933 MGTPSGAVDGVSPRMRSQTMPAGAPRWQPPPPPQLRAKPPPQYGGGYGGGYGPYAGHGYGVSGAGHAQQVHLSPHRQGPVHGAHYGTGGRPQQQQQHHHVSRSLENQFMTALTIGGGSLPVGPDEMSPIAHAPNSGHLEDGSPSMAPEWDPFYLDDATDTEAAESEYGSAHASIPSAAIPTGAYGHRQASSAWAFGGGGAPRGGMQQRGRRASHSHGGNSYVSNNDSSSWGGRGGWMDVGAPPDDGRPASYGSGSFGSVAPPQALYGDVYGASPHGGSSWGGGSSVGVPMGGLPMGAGYGSYGGSGIPTVIGFSPQTGGGFSGGHVGTRGGLPMPHHHQHRPHGHGQHAHPGPQSASHVAQHLPLPSQAAGGSYSGQSQGQMPLAFGTSPGPALPTSSLPRRMQPYPP* # PASA_UPDATE: g7873.t1, single gene model update, valid-1, status:[pasa:asmbl_5199,status:12], valid-1 NODE_2899_length_4808_cov_54.8616 . gene 1 2378 . - . ID=g7873;Name=g7873.t1 NODE_2899_length_4808_cov_54.8616 . mRNA 1 2378 . - . ID=g7873.t1;Parent=g7873;Name=g7873.t1 NODE_2899_length_4808_cov_54.8616 . five_prime_UTR 2312 2378 . - . ID=g7873.t1.utr5p1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . exon 2017 2378 . - . ID=g7873.t1.exon1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . CDS 2017 2311 . - 0 ID=cds.g7873.t1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . exon 1539 1583 . - . ID=g7873.t1.exon2;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . CDS 1539 1583 . - 2 ID=cds.g7873.t1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . exon 1113 1181 . - . ID=g7873.t1.exon3;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . CDS 1113 1181 . - 2 ID=cds.g7873.t1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . exon 843 911 . - . ID=g7873.t1.exon4;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . CDS 843 911 . - 2 ID=cds.g7873.t1;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . exon 1 643 . - . ID=g7873.t1.exon5;Parent=g7873.t1 NODE_2899_length_4808_cov_54.8616 . CDS 1 643 . - 2 ID=cds.g7873.t1;Parent=g7873.t1;3_prime_partial=true #PROT g7873.t1 g7873 MVDEIDAVNQQIAAVEVLIVNAEKEISEVEGRLRYIENALGDQSRASEHAKWEKDLVYYRDKESKLRDKESKLRDEKSKLRDEKSKLRDEKNILLQRAGNRKRHRSDEDDARGGVDKGKKRAASVSEDEAVDCSDQGKSAVGVGTLGGAPPAKMIKMANGIFQAKVSAIHSRLCKTNFTEDHLCNPEEVTSIPFPCASSSALPDRFSVDADGRFEFMGRENIKPLLSLMRTLLSGGTIYCRISGNVNYGATVILNVYGTRGYGKSFMLAAAVGLLLKEGHPVVFIPNALDLVSNALECLQAGLAVAFPDMVKEIELCRSESELINLVYGKHFLLVVDQLNALEESAGLDRAEVQQASKLLKSIRSSHPYVRGY # ORIGINAL: g6816.t1 original gene structure, not modified by PASA NODE_2472_length_6153_cov_40.3707 AUGUSTUS gene 18 4293 . - . ID=g6816;Name=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS mRNA 18 4293 . - . ID=g6816.t1;Parent=g6816;Name=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 4097 4293 . - . ID=g6816.t1.exon1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 4097 4293 . - 0 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 3713 3840 . - . ID=g6816.t1.exon2;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 3713 3840 . - 1 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 3564 3613 . - . ID=g6816.t1.exon3;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 3564 3613 . - 2 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 3204 3314 . - . ID=g6816.t1.exon4;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 3204 3314 . - 0 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 2596 2776 . - . ID=g6816.t1.exon5;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 2596 2776 . - 0 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 2310 2418 . - . ID=g6816.t1.exon6;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 2310 2418 . - 2 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 1878 1954 . - . ID=g6816.t1.exon7;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 1878 1954 . - 1 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 1509 1586 . - . ID=g6816.t1.exon8;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 1509 1586 . - 2 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 863 985 . - . ID=g6816.t1.exon9;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 863 985 . - 2 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 537 627 . - . ID=g6816.t1.exon10;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 537 627 . - 2 ID=cds.g6816.t1;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS exon 18 273 . - . ID=g6816.t1.exon11;Parent=g6816.t1 NODE_2472_length_6153_cov_40.3707 AUGUSTUS CDS 18 273 . - 1 ID=cds.g6816.t1;Parent=g6816.t1 #PROT g6816.t1 g6816 MSSVVPTSSSAGDAKKKTAPSSGSEAYYKAHLETIVKENRELRQKLEAFERENRVLKKSVYDLSVSVGSIKDRRSGNKLPSFDIDAVLCNTAEVDTAGVGAADEDEGAVRQRRDGRSFQYKYELKGHNGAVYTVQYSPCGRILASGSFDKTVRLWDTLMQRELRCLDMHKLNVSDVSWSSESSLLLSGSYDQTVKLWDVESGKMTASFEALGFVQAVAFNPSDNNSFVAGTTRKQIHSFDRRSDKPVRSIDNDAMVNSIYVYRDGTLVLSGDSVGALKTWDLRTGGCIDTVLNEETRKPISHIHVSSRGLVLRVYDRGSMPPKTPLRLQHAVKGHKNKNYPIRSSFFHGAQHISRTVRTNALDDDGGAGDRKRGTDESARDESEKSVHGTLLLATGSADCFAYIYDVGGAEGTSEVVQRLEGHTDRVYGANFHPADPILATCSGDSTIRIWTAKAKRLQAGAFEMS* # PASA_UPDATE: g6817.t1, single gene model update, valid-1, status:[pasa:asmbl_4390,status:3], valid-1 NODE_2472_length_6153_cov_40.3707 . gene 4572 6052 . + . ID=g6817;Name=g6817.t1 NODE_2472_length_6153_cov_40.3707 . mRNA 4572 6052 . + . ID=g6817.t1;Parent=g6817;Name=g6817.t1 NODE_2472_length_6153_cov_40.3707 . five_prime_UTR 4572 5004 . + . ID=g6817.t1.utr5p1;Parent=g6817.t1 NODE_2472_length_6153_cov_40.3707 . exon 4572 6052 . + . ID=g6817.t1.exon1;Parent=g6817.t1 NODE_2472_length_6153_cov_40.3707 . CDS 5005 5661 . + 0 ID=cds.g6817.t1;Parent=g6817.t1 NODE_2472_length_6153_cov_40.3707 . three_prime_UTR 5662 6052 . + . ID=g6817.t1.utr3p1;Parent=g6817.t1 #PROT g6817.t1 g6817 MPENGSRNAHESAKSEQYRHDRGAVDDRARDRDRRIESEYRRNDGDIRASRHAEAPISRERLPTSDVRDSDLCDARRDRSDRERSYAGNIRHLDRDSTRRDGADGRDGGRDRERERAQYVSSARESVREHDRDVSGDDHGRSSLGPGDRLRDAPDFHGRSYQSSVESHSQSNDARSDREGHRGTGGGRPATYAESAYRALPSEDRGRHERLRNSLVGH* # ORIGINAL: g8579.t1 original gene structure, not modified by PASA NODE_1334_length_11993_cov_41.744 AUGUSTUS gene 1480 3058 . - . ID=g8579;Name=g8579.t1 NODE_1334_length_11993_cov_41.744 AUGUSTUS mRNA 1480 3058 . - . ID=g8579.t1;Parent=g8579;Name=g8579.t1 NODE_1334_length_11993_cov_41.744 AUGUSTUS exon 2887 3058 . - . ID=g8579.t1.exon1;Parent=g8579.t1 NODE_1334_length_11993_cov_41.744 AUGUSTUS CDS 2887 3058 . - 0 ID=cds.g8579.t1;Parent=g8579.t1 NODE_1334_length_11993_cov_41.744 AUGUSTUS exon 1480 1769 . - . ID=g8579.t1.exon2;Parent=g8579.t1 NODE_1334_length_11993_cov_41.744 AUGUSTUS CDS 1480 1769 . - 2 ID=cds.g8579.t1;Parent=g8579.t1 #PROT g8579.t1 g8579 MCIDNLSINILSTELSFGDFIRVNGSHACYEGQPDTFSGSSSDWTGDVCSDTRLSQGAQRPAPVVFAPKAIVGDGQTVIVTWFRSLRSGLDNTLRYEIQRTPAFSSGRNPIVDATTFTDVAVVPGVLYAYKIVAVSSTERSRASPPSNHVLIA* # PASA_UPDATE: g8590.t1, single gene model update, valid-1, status:[pasa:asmbl_3263,status:12], valid-1 NODE_2009_length_8111_cov_49.2555 . gene 4418 7944 . + . ID=g8590;Name=g8590.t1 NODE_2009_length_8111_cov_49.2555 . mRNA 4418 7944 . + . ID=g8590.t1;Parent=g8590;Name=g8590.t1 NODE_2009_length_8111_cov_49.2555 . five_prime_UTR 4418 4603 . + . ID=g8590.t1.utr5p1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 4418 4699 . + . ID=g8590.t1.exon1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 4604 4699 . + 0 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 4953 5005 . + . ID=g8590.t1.exon2;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 4953 5005 . + 0 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 5110 5284 . + . ID=g8590.t1.exon3;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 5110 5284 . + 1 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 5430 5563 . + . ID=g8590.t1.exon4;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 5430 5563 . + 0 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 5760 5842 . + . ID=g8590.t1.exon5;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 5760 5842 . + 1 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 6164 6261 . + . ID=g8590.t1.exon6;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 6164 6261 . + 2 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 6510 6590 . + . ID=g8590.t1.exon7;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 6510 6590 . + 0 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 6833 6921 . + . ID=g8590.t1.exon8;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 6833 6921 . + 0 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 7158 7253 . + . ID=g8590.t1.exon9;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 7158 7253 . + 1 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 7621 7652 . + . ID=g8590.t1.exon10;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 7621 7652 . + 1 ID=cds.g8590.t1;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . exon 7832 7944 . + . ID=g8590.t1.exon11;Parent=g8590.t1 NODE_2009_length_8111_cov_49.2555 . CDS 7832 7944 . + 2 ID=cds.g8590.t1;Parent=g8590.t1 #PROT g8590.t1 g8590 MVFAWLRRALIAVAHETKSAIPRTTRMEAAASAQAAQAVASGEEPLYQAVRVNGRYVNPFPTWEERSLLDVLKWRWNRDDKSGVPTDPKILDQTMPVLRPDFENLAQKTLPGEAKVTWIGHATVLVQLDGLNIITDPIFSERCAPVQFIGPKRYRPTPCSIDELPKIHAVVLSHDHYDHTDTASLRRLNEVHSPAYFVPMGMKDYLKSICVDEKRVFELTWWQEHLLEGTGVKFACVPVQHWCRRTINNRNVCLWGGWVVQGPSANFFFAGDTAYCGSFKQIGKKYGPITLSAIPIGAYEPRWFMKPQHVNPEEAVQIHNDVGSQWSVGIHYGTFVLTDEASGSIWLVR* # ORIGINAL: g8589.t1 original gene structure, not modified by PASA NODE_2009_length_8111_cov_49.2555 AUGUSTUS gene 661 3649 . + . ID=g8589;Name=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS mRNA 661 3649 . + . ID=g8589.t1;Parent=g8589;Name=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS exon 661 746 . + . ID=g8589.t1.exon1;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS CDS 661 746 . + 0 ID=cds.g8589.t1;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS exon 1322 1648 . + . ID=g8589.t1.exon2;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS CDS 1322 1648 . + 1 ID=cds.g8589.t1;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS exon 1996 2316 . + . ID=g8589.t1.exon3;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS CDS 1996 2316 . + 1 ID=cds.g8589.t1;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS exon 2530 2697 . + . ID=g8589.t1.exon4;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS CDS 2530 2697 . + 1 ID=cds.g8589.t1;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS exon 2848 3649 . + . ID=g8589.t1.exon5;Parent=g8589.t1 NODE_2009_length_8111_cov_49.2555 AUGUSTUS CDS 2848 3649 . + 1 ID=cds.g8589.t1;Parent=g8589.t1 #PROT g8589.t1 g8589 MSTPEVAVRKRESAVTVELREVGALSDKCREWRETIGEAVADPEAVQQATNKFIGELETELEDETERRQLRRESFSGFWSKILSFPCMAVVIRDFHDQYIAYSGVPYGDYGVTATMEVNFLLAVLVVACIQLALLLIVVILRACADALRSTKRATEGLRQSALYRWVEALSQSKTLSDDRYEAWLVTYEAGFGALMVLAIIFASSKYMLVVNDKCIVWETDLNSALGIPPGLYVHPNSTGPCFAGVSSPSSAKTSLPVPVGTADSNGDESVSLNVRIEMGVDSAAFVLPLLLLNLLIPQLARAISTAADHRMYGFRIGGVSLVWTVLIAIYITFSVYAFGIALKYGYYYGFEGYGPIITRQGQLIAVFFCEWLCLLIPFLRGDPYFCAIRRAKAAVEAHVQALLADEGARVREPKGTFRSLLAIAAEDPQPSRGEIVFVAYKVVSFVWINFPVGFLSAVMLLGPYRKLLSVLRESVGDPGDVQYRLSVIYLTVALGGALVIGRIVFSAVIEFGRRRSEAGFLIAPSKRWQDWYGNVQYLRMYRKEASTLCRASESRTTLTAGGTSNC* # ORIGINAL: g4139.t1 original gene structure, not modified by PASA NODE_2906_length_4782_cov_39.6348 AUGUSTUS gene 114 2505 . - . ID=g4139;Name=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS mRNA 114 2505 . - . ID=g4139.t1;Parent=g4139;Name=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 2493 2505 . - . ID=g4139.t1.exon1;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 2493 2505 . - 0 ID=cds.g4139.t1;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 1527 2184 . - . ID=g4139.t1.exon2;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 1527 2184 . - 2 ID=cds.g4139.t1;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 1170 1370 . - . ID=g4139.t1.exon3;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 1170 1370 . - 1 ID=cds.g4139.t1;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 445 546 . - . ID=g4139.t1.exon4;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 445 546 . - 1 ID=cds.g4139.t1;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 114 253 . - . ID=g4139.t1.exon5;Parent=g4139.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 114 253 . - 1 ID=cds.g4139.t1;Parent=g4139.t1 #PROT g4139.t1 g4139 MFMLGKSNPIMKDAVTSALGKTFPQLDSEIIEYISGALHESDPDDVSTSEGVYEVVAPLLSDAGGSDKDILAFCDKLSSMFLSKNEGKAKTGGISRITPLDAPVSMTKLNEQFDSDVREMNSVWMDRRVNDIARVDQDKLDKAEAKMRAKQEKRTTKDEAAAANGANKDEEVPMANCVLAKDVSGGKTRDIRIENFDLCYGGKSLLNGAVLNLSYGHRYGLVGRNGIGKTTILRALSGRQIPLPPTLTVLHVEQEVIGDDTGALQSVLEADTVREGMLKEERDIQAELSARKTRGDVSDDSALASRLSEIYIKLSEMESDKAPSRASEILCGLGFSADMQKMQTKQFSGGWRMRLALARALFLRPDLLFLD # ORIGINAL: g4140.t1 original gene structure, not modified by PASA NODE_2906_length_4782_cov_39.6348 AUGUSTUS gene 2600 3019 . + . ID=g4140;Name=g4140.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS mRNA 2600 3019 . + . ID=g4140.t1;Parent=g4140;Name=g4140.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 2600 2796 . + . ID=g4140.t1.exon1;Parent=g4140.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 2600 2796 . + 0 ID=cds.g4140.t1;Parent=g4140.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 3010 3019 . + . ID=g4140.t1.exon2;Parent=g4140.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 3010 3019 . + 1 ID=cds.g4140.t1;Parent=g4140.t1 #PROT g4140.t1 g4140 MAPSTRGRKPAADDGEVKRVDTARPAKKARTVKAKSEIPAKSETTVDVKIPTASVGGIRRLVVERCNS* # ORIGINAL: g4141.t1 original gene structure, not modified by PASA NODE_2906_length_4782_cov_39.6348 AUGUSTUS gene 3044 3446 . + . ID=g4141;Name=g4141.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS mRNA 3044 3446 . + . ID=g4141.t1;Parent=g4141;Name=g4141.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 3044 3155 . + . ID=g4141.t1.exon1;Parent=g4141.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 3044 3155 . + 0 ID=cds.g4141.t1;Parent=g4141.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS exon 3343 3446 . + . ID=g4141.t1.exon2;Parent=g4141.t1 NODE_2906_length_4782_cov_39.6348 AUGUSTUS CDS 3343 3446 . + 2 ID=cds.g4141.t1;Parent=g4141.t1 #PROT g4141.t1 g4141 MLQKALVDAFPGVEVVVNATAPRRGSFECTLEKENGEAVLVWTGVKKGPPRSLKFPDYDAVVADIKAHVAN* # ORIGINAL: g2792.t1 original gene structure, not modified by PASA NODE_18007_length_201_cov_49.9524_potentialcontaminant AUGUSTUS gene 2 134 . + . ID=g2792;Name=g2792.t1 NODE_18007_length_201_cov_49.9524_potentialcontaminant AUGUSTUS mRNA 2 134 . + . ID=g2792.t1;Parent=g2792;Name=g2792.t1 NODE_18007_length_201_cov_49.9524_potentialcontaminant AUGUSTUS exon 2 134 . + . ID=g2792.t1.exon1;Parent=g2792.t1 NODE_18007_length_201_cov_49.9524_potentialcontaminant AUGUSTUS CDS 2 134 . + 1 ID=cds.g2792.t1;Parent=g2792.t1 #PROT g2792.t1 g2792 LQVLKTVEGTVNPAETFDRQVIRHLVGIALGKFVEIVACAAAK* # PASA_UPDATE: g7652.t1, single gene model update, valid-1, status:[pasa:asmbl_8282,status:12], valid-1 NODE_578_length_20879_cov_41.3993 . gene 19903 20760 . - . ID=g7652;Name=g7652.t1 NODE_578_length_20879_cov_41.3993 . mRNA 19903 20760 . - . ID=g7652.t1;Parent=g7652;Name=g7652.t1 NODE_578_length_20879_cov_41.3993 . five_prime_UTR 20746 20760 . - . ID=g7652.t1.utr5p1;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . five_prime_UTR 20587 20615 . - . ID=g7652.t1.utr5p2;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . exon 20746 20760 . - . ID=g7652.t1.exon1;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . exon 20500 20615 . - . ID=g7652.t1.exon2;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . CDS 20500 20586 . - 0 ID=cds.g7652.t1;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . exon 20306 20407 . - . ID=g7652.t1.exon3;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . CDS 20306 20407 . - 0 ID=cds.g7652.t1;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . exon 19903 20112 . - . ID=g7652.t1.exon4;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . CDS 19969 20112 . - 0 ID=cds.g7652.t1;Parent=g7652.t1 NODE_578_length_20879_cov_41.3993 . three_prime_UTR 19903 19968 . - . ID=g7652.t1.utr3p1;Parent=g7652.t1 #PROT g7652.t1 g7652 MCLVATNDADEIIGFCLGTTIEKRQSAWKYGYLTWLGVDRAFQGCGLASRMFDCFRSICVGAKARMMLIDTEAKNAGAIRFFEKLGFGHPEPHVYVSGNVARPLSVHASN* # PASA_UPDATE: g7649.t1, single gene model update, valid-1, status:[pasa:asmbl_8279,status:3], valid-1 NODE_578_length_20879_cov_41.3993 . gene 4609 12079 . + . ID=g7649;Name=g7649.t1 NODE_578_length_20879_cov_41.3993 . mRNA 4609 12079 . + . ID=g7649.t1;Parent=g7649;Name=g7649.t1 NODE_578_length_20879_cov_41.3993 . five_prime_UTR 4609 4846 . + . ID=g7649.t1.utr5p1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 4609 5002 . + . ID=g7649.t1.exon1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 4847 5002 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 5231 6886 . + . ID=g7649.t1.exon2;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 5231 6886 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 7165 7451 . + . ID=g7649.t1.exon3;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 7165 7451 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 7650 8088 . + . ID=g7649.t1.exon4;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 7650 8088 . + 1 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 8254 8390 . + . ID=g7649.t1.exon5;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 8254 8390 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 8504 8676 . + . ID=g7649.t1.exon6;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 8504 8676 . + 1 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 8799 8920 . + . ID=g7649.t1.exon7;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 8799 8920 . + 2 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 9225 9739 . + . ID=g7649.t1.exon8;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 9225 9739 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 10012 10210 . + . ID=g7649.t1.exon9;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 10012 10210 . + 1 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 10381 10567 . + . ID=g7649.t1.exon10;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 10381 10567 . + 0 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 10902 10964 . + . ID=g7649.t1.exon11;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 10902 10964 . + 2 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . exon 11116 12079 . + . ID=g7649.t1.exon12;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . CDS 11116 11684 . + 2 ID=cds.g7649.t1;Parent=g7649.t1 NODE_578_length_20879_cov_41.3993 . three_prime_UTR 11685 12079 . + . ID=g7649.t1.utr3p1;Parent=g7649.t1 #PROT g7649.t1 g7649 MVVDSGIAAHPAAARETVSIVNVGLPSIRAASPELPQTANVHIDGAFRSKPKAPRADRGKRTTLGNKCHVWDCLSALRRAPIVDHIRNVDTLARGGEDVARRLVREGAVADILHVMQTQPTSMSVVGNCICALAALCSTYDGDHALYTGGGVRIVLAAAESLFALVDGRPREGDSSPPGLGHRGRGGSKSRHARDVMPGPPHGRMDAPSAPPNRTTHVPYSTAPPSPAVPANSLGGQASEHLSGDPMRSEGSRPHASHVRQPLRVHAMDGHSAPARDAAAHSQADLAIQLRSHLGHTGHGAVGGDNARPTLGHGFRLDPIPPTPIQEANANNASSNPFLRELTGRSPAGGLVSSGGGSGSGSGSGSTASLDREGGGGTPTAAAATSTAAVVVAAPPQQQEAFARPAAGGRRTSIATRRQARPLTMADQALTHDSANGRRASVSLSALPGRTNLGMSAASSSESDSVGLFGVKLGTFERRVVPRRSFGSNSSLKGLSHTNNSVFASTAGLCVSEYTSVVEGSRSTTPSQLREEPEDGEIIDVTERLLELFREQIKGHQRMGQSDTLVEAIAAMDAEELRRSLVYASTMFGRLGRLVALLESIGAEVSGDSLMLPLTDAVRELLGVKYAALYVLDGERGELWTTCQPFDTNCEAGAPLAPSYSMAGSMSQLYNMRRWVSISADITGVVARSGEAMYIDNPASDPRFAQSEFGNNATLCVPVKAPPSENSAGGRLLGVLVASGPCNALPQEPTDSSIASRFGIGPRARFDPEDELLLRSLARESAAVLQKALDLTVLMKAQQRVSVLLDTTRILSSEVELDGLIRVISQSAKTLLNADRCTIFLVDNDTSELWTNVYDFDGRVREIRIKKSMGIAGAVATTGRIVNIQDAYLDDRFNQDIDRKTGYRTRSMIAMPIVNIVGETIGVIQMINKLNGGPFNFEDERLLNAFSSQAAVAIEKSKLFQKSTHMRQYLENILGSINSTVLTLSPAGNLVTTNRADLLTDLGISKAKMTGASYYSWLGDANRELATAIERVYKTGVAVQGSDYLLVGPHGTVSVNYSLAPLEGRQQRDGNVYWSRIRNSLRRLQGINRHARIAKAHRLREVDAGNALDPDDGAEMSNFEQNFWATYRAQLQYQRAEQEFDGIVVVLDDISKEKKMMTTLGRYMSPSLAQQVLEEGGQKLGGTRQKVTVMFGDIRGFTNMSESMDPRDLVETLNGYFECAVDAISQNNGILDKYIGDAVMAVFGVPFVADDDAIRACRTALQMQRNLGRLNVRRAQKGEPALGFGIGVNTGVVVNGNVGCLKRMEYTVIGDSVNLASRVEGLTKKYHVCILISEFTLAETGDTFLVREVDRVRVVGKKKPIGIYELVCERSELSTVGAAAAAEIAAMSSGNVDASGASLGVSGESASTSTDLVVPSSERRLSEIVPGGFADTNRKIQLLPLYVKGLDAMRGRRFADAMALFEEGVQGGDGAAEVMLERCRRLSETTLDDDWDGVWNADAK* # PASA_UPDATE: g7651.t1, single gene model update, valid-1, status:[pasa:asmbl_8278,status:12], valid-1 NODE_578_length_20879_cov_41.3993 . gene 17206 18803 . - . ID=g7651;Name=g7651.t1 NODE_578_length_20879_cov_41.3993 . mRNA 17206 18803 . - . ID=g7651.t1;Parent=g7651;Name=g7651.t1 NODE_578_length_20879_cov_41.3993 . exon 18735 18803 . - . ID=g7651.t1.exon1;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . CDS 18735 18803 . - 0 ID=cds.g7651.t1;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . exon 18566 18637 . - . ID=g7651.t1.exon2;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . CDS 18566 18637 . - 0 ID=cds.g7651.t1;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . exon 17206 18421 . - . ID=g7651.t1.exon3;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . CDS 17462 18421 . - 0 ID=cds.g7651.t1;Parent=g7651.t1 NODE_578_length_20879_cov_41.3993 . three_prime_UTR 17206 17461 . - . ID=g7651.t1.utr3p1;Parent=g7651.t1 #PROT g7651.t1 g7651 MDCITIQHEDPDLQLKHYKQKWKVVITWNRFTSALRDAVLLYFENQKDEYFERFSVVPWRKIFLAAVPFICYLLLFKNYNILRAATGMVTLIPPSVTFLPWLEELVFRCQPHRILASYANPLLDVLAAFPYLLHFPLPVLFVVYLYVTPRRRRDIFPFLWLAGWVNFSTVLFQFFFPTAPPWFADTAKFDAEGNLIDVGPPEAGFIRVDRMMGFPLFHNIYAHAPHKFGAFPSLHVAWPVVVLVSRPWVSTRFAIGHVIWISWAAMYSNHHYGVDALMGIVIVFVVSFLTSRLYSPFHNHTIEAAVLPVSMDAESAAARDLKAGSGAASSVDDYLSSGGSLGKRPSNYWSESIMTRLINSAECLYV* # ORIGINAL: g7648.t1 original gene structure, not modified by PASA NODE_578_length_20879_cov_41.3993 AUGUSTUS gene 153 3935 . - . ID=g7648;Name=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS mRNA 153 3935 . - . ID=g7648.t1;Parent=g7648;Name=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 3767 3935 . - . ID=g7648.t1.exon1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 3767 3935 . - 0 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 3473 3619 . - . ID=g7648.t1.exon2;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 3473 3619 . - 2 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 2973 3295 . - . ID=g7648.t1.exon3;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 2973 3295 . - 2 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 2619 2746 . - . ID=g7648.t1.exon4;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 2619 2746 . - 0 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 2329 2441 . - . ID=g7648.t1.exon5;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 2329 2441 . - 1 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 2044 2155 . - . ID=g7648.t1.exon6;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 2044 2155 . - 2 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 1688 1847 . - . ID=g7648.t1.exon7;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 1688 1847 . - 1 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 1334 1522 . - . ID=g7648.t1.exon8;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 1334 1522 . - 0 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 612 888 . - . ID=g7648.t1.exon9;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 612 888 . - 0 ID=cds.g7648.t1;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS exon 153 259 . - . ID=g7648.t1.exon10;Parent=g7648.t1 NODE_578_length_20879_cov_41.3993 AUGUSTUS CDS 153 259 . - 2 ID=cds.g7648.t1;Parent=g7648.t1 #PROT g7648.t1 g7648 MSDQEAAARLPAFIATTVLSALWSIYILYFNSRAFAWLVNRILQRLLPKYKVSLSFGSLSFSLLGGKIMFRDVKYVSNNMSVSVMDGHILVRFWLVNFRKSVRDASSESRLGVQLNGVDIQIFNNTDKYDYIGSLMKKRGGVRGSEDDNAGVDVHGESVKMDTAPLVKPAWMEIFPAVHLTLVRGAVTFGSPLLKRLATYEWREVHGVLAFERASNPFDVYQTVCNFVVKRGSLRLLPTDQIWSSKNLGKEVHVSFMRPREALYANDKKESSESRDLILTTADMVVEYRVDVAGRTSEESLQSGLDPLWEVSLRLGADTVISYGPWADFHRAAIVKYFFPWDFEDGVVPAENNPGELRQYPQFRAQVRFDETASVHVPFGAAKQDANGQSSWDEVVLSLATESELEVVYPMMHAEDGYTPELNAVLHMTKVTASHKYKHLLGCKRMGVRVLMHNPRQWNAVHRWSIDLDLDVAEVHYVRALVRFVVGLGSDWASYGETPDLAHFVPFEYNLALHLRAASVFWCVNEFNVLEKPDDLDDAALIVLDAPEMDVKLYIPMLEYGSPTIFHTTSFTVR* # PASA_UPDATE: g7650.t1, single gene model update, valid-1, status:[pasa:asmbl_8280,status:3], valid-1 # PASA_UPDATE: g7650.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8281,status:3], valid-1 NODE_578_length_20879_cov_41.3993 . gene 12649 16788 . - . ID=g7650;Name=g7650.t1 NODE_578_length_20879_cov_41.3993 . mRNA 12649 16788 . - . ID=g7650.t1;Parent=g7650;Name=g7650.t1 NODE_578_length_20879_cov_41.3993 . five_prime_UTR 16660 16788 . - . ID=g7650.t1.utr5p1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . exon 16480 16788 . - . ID=g7650.t1.exon1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . CDS 16480 16659 . - 0 ID=cds.g7650.t1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . exon 16131 16316 . - . ID=g7650.t1.exon2;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . CDS 16131 16316 . - 0 ID=cds.g7650.t1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . exon 15572 15673 . - . ID=g7650.t1.exon3;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . CDS 15572 15673 . - 0 ID=cds.g7650.t1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . exon 15282 15355 . - . ID=g7650.t1.exon4;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . CDS 15282 15355 . - 0 ID=cds.g7650.t1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . exon 12649 14936 . - . ID=g7650.t1.exon5;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . CDS 12830 14936 . - 1 ID=cds.g7650.t1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . three_prime_UTR 12649 12829 . - . ID=g7650.t1.utr3p1;Parent=g7650.t1 NODE_578_length_20879_cov_41.3993 . mRNA 12649 16788 . - . ID=g7650.t1.1.5b6be70c;Parent=g7650;Name=g7650.t1 NODE_578_length_20879_cov_41.3993 . five_prime_UTR 16413 16788 . - . ID=g7650.t1.1.5b6be70c.utr5p1;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . exon 16131 16788 . - . ID=g7650.t1.1.5b6be70c.exon1;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . CDS 16131 16412 . - 0 ID=cds.g7650.t1.1.5b6be70c;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . exon 15572 15673 . - . ID=g7650.t1.1.5b6be70c.exon2;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . CDS 15572 15673 . - 0 ID=cds.g7650.t1.1.5b6be70c;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . exon 15282 15355 . - . ID=g7650.t1.1.5b6be70c.exon3;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . CDS 15282 15355 . - 0 ID=cds.g7650.t1.1.5b6be70c;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . exon 12649 14936 . - . ID=g7650.t1.1.5b6be70c.exon4;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . CDS 12830 14936 . - 1 ID=cds.g7650.t1.1.5b6be70c;Parent=g7650.t1.1.5b6be70c NODE_578_length_20879_cov_41.3993 . three_prime_UTR 12649 12829 . - . ID=g7650.t1.1.5b6be70c.utr3p1;Parent=g7650.t1.1.5b6be70c #PROT g7650.t1 g7650 MALHTFPRVATLLILSVAALTHGCGISTHIEVGHRAIEYFGSQTHPNYYALLKKHQDAFQAGNPFPDAMFAPCGANGNDAENTHWTPFLKAAAEYVHETYPQPWDEATEKLVVFLLGLVSHQVADISWHSLGIDQGLLTSMGGTNFHGDGLGRAQAVGDRLDDAIVHFDMEMGYDQTVGHWYLPLHDLVPIYRKMDNNTDVTIGTLLKCTSLLFLGRFGEKLALSNIYLDTSEGALAGFEERRSPFLADNFVSYFLGGVDDMAQWTANVWDAVIEVVEHGTEGCDLPNNPLYVRCGNSSATNARLPPMSGRAPAKAEEIRRHYETRFAMAAPFMGKAEGLVTAEPHLRGVRLSVDMEAFSSLMPSKRTPVEAQAAADTPDAPTPMNAPPLGNYARLGASVAAGDFNGDGTPDLAVGSPGSGTPGDAHTGSVLVTVSPAAEGIAQATLSGPQTMTLEGLIPFGRFGESLCTCDINGDGIDDLAVGAPSAFSETLSYRGALYVYYGRKGSAPVFSSPDMIIEAEGPDGSLSSLSNFGFRLTSGDLDSDGHADLIVSSPYANYNDRHQSGAVWVILSSSQQRRSLLGPRLNVSAATDYVISGTASYGWFGYNTLAVTNSGKGRHLVVGEPYARDCRQADCRMDDADIQGIGRLHVYDFSGCTAATSASFVPARVAFVVGTQEFETFGSNFAAGNFGADGRFVLAVSSPRKNVAGKLLFGATSWVQSGEVNVYAFDDILAAVNGSKTTDLSPFATLQGDRHGARFGERMSAVRVAKGDALLVSAPFRTEDPAGIDRSGRDEGVLYVYENIAAGNPTLSHCALTTLSRPCPADASSASFRPYQAQSRFAWAYAVADFDGNGHWDIAVGASFSNSRERMGGAVYMVSL* #PROT g7650.t1.1.5b6be70c g7650 MARRVLFTFLCAACFCNLVHRVYYMDGCMLAQAGNPFPDAMFAPCGANGNDAENTHWTPFLKAAAEYVHETYPQPWDEATEKLVVFLLGLVSHQVADISWHSLGIDQGLLTSMGGTNFHGDGLGRAQAVGDRLDDAIVHFDMEMGYDQTVGHWYLPLHDLVPIYRKMDNNTDVTIGTLLKCTSLLFLGRFGEKLALSNIYLDTSEGALAGFEERRSPFLADNFVSYFLGGVDDMAQWTANVWDAVIEVVEHGTEGCDLPNNPLYVRCGNSSATNARLPPMSGRAPAKAEEIRRHYETRFAMAAPFMGKAEGLVTAEPHLRGVRLSVDMEAFSSLMPSKRTPVEAQAAADTPDAPTPMNAPPLGNYARLGASVAAGDFNGDGTPDLAVGSPGSGTPGDAHTGSVLVTVSPAAEGIAQATLSGPQTMTLEGLIPFGRFGESLCTCDINGDGIDDLAVGAPSAFSETLSYRGALYVYYGRKGSAPVFSSPDMIIEAEGPDGSLSSLSNFGFRLTSGDLDSDGHADLIVSSPYANYNDRHQSGAVWVILSSSQQRRSLLGPRLNVSAATDYVISGTASYGWFGYNTLAVTNSGKGRHLVVGEPYARDCRQADCRMDDADIQGIGRLHVYDFSGCTAATSASFVPARVAFVVGTQEFETFGSNFAAGNFGADGRFVLAVSSPRKNVAGKLLFGATSWVQSGEVNVYAFDDILAAVNGSKTTDLSPFATLQGDRHGARFGERMSAVRVAKGDALLVSAPFRTEDPAGIDRSGRDEGVLYVYENIAAGNPTLSHCALTTLSRPCPADASSASFRPYQAQSRFAWAYAVADFDGNGHWDIAVGASFSNSRERMGGAVYMVSL* # ORIGINAL: g671.t1 original gene structure, not modified by PASA NODE_3507_length_3315_cov_39.2747 AUGUSTUS gene 595 3056 . - . ID=g671;Name=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS mRNA 595 3056 . - . ID=g671.t1;Parent=g671;Name=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 2955 3056 . - . ID=g671.t1.exon1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 2955 3056 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 2658 2756 . - . ID=g671.t1.exon2;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 2658 2756 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 2362 2508 . - . ID=g671.t1.exon3;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 2362 2508 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 1952 2245 . - . ID=g671.t1.exon4;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 1952 2245 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 1726 1797 . - . ID=g671.t1.exon5;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 1726 1797 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 1535 1607 . - . ID=g671.t1.exon6;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 1535 1607 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 1223 1296 . - . ID=g671.t1.exon7;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 1223 1296 . - 2 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 1025 1111 . - . ID=g671.t1.exon8;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 1025 1111 . - 0 ID=cds.g671.t1;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS exon 595 705 . - . ID=g671.t1.exon9;Parent=g671.t1 NODE_3507_length_3315_cov_39.2747 AUGUSTUS CDS 595 705 . - 0 ID=cds.g671.t1;Parent=g671.t1 #PROT g671.t1 g671 MQGKLRKGDLVYNARDRKKVRVPRLVRMHSDEMEDVPEVLAGEICAMFGLECKSGDTFTDGTVNLAMTSMFIPEPVISLAIRPERKEDLEKFTKAVSRFQREDPTLRVAVDNDSKETIISGMGELHLDIYIERMRREYGCATVVGKPKVAFRETITQVAEFDYIHKKQSGGAGQYGRVIGRLEPMGEADLMKNEFVNDTIGTNIPPPFIPAIEKGFFEGCDRGPMIGHPIIGVRFVLVDGAAHMVDSNELSFKLAALGAIRDGMAEGKACVLEPIMKVEVTVPDEFQGSVVGQLNKRKGSIVNSETAEGYCVIQAEGKGEFSMEFCKYMQTLPNVQAELVAAYEKEREAKRK* # ORIGINAL: g11366.t1 original gene structure, not modified by PASA NODE_3339_length_3691_cov_58.1745 AUGUSTUS gene 38 3439 . - . ID=g11366;Name=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS mRNA 38 3439 . - . ID=g11366.t1;Parent=g11366;Name=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 3290 3439 . - . ID=g11366.t1.exon1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 3290 3439 . - 0 ID=cds.g11366.t1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 1605 2714 . - . ID=g11366.t1.exon2;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 1605 2714 . - 0 ID=cds.g11366.t1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 1269 1376 . - . ID=g11366.t1.exon3;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 1269 1376 . - 0 ID=cds.g11366.t1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 855 1000 . - . ID=g11366.t1.exon4;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 855 1000 . - 0 ID=cds.g11366.t1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 428 563 . - . ID=g11366.t1.exon5;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 428 563 . - 1 ID=cds.g11366.t1;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS exon 38 144 . - . ID=g11366.t1.exon6;Parent=g11366.t1 NODE_3339_length_3691_cov_58.1745 AUGUSTUS CDS 38 144 . - 0 ID=cds.g11366.t1;Parent=g11366.t1 #PROT g11366.t1 g11366 MTRAEHELIVSRHAEAAQLRAKGDLMAKYDMELRTKASLAAIESAELNSKVNSLTASLRDLERQLETERSARQAISTDRDSMNTELATRRAEMERMKTVLASSEEGVLSMQRRVEATQSSISELQAENEGLVRLIESMRNAFIAAGSSATDVASSDYVRASVEFSDTASETADEAVGGSGSGYNNGGRTTSARHARAVRAEKEARARANELLREKDDTIRALRSARELERSEAAALVANAQRAAREAEKNTEDAIERANIEIEERLAEALADTVPVSDYHRVEQQLRLTLDQLQEASDANQQYEAVSQQQQGHIDELSRRVDELEQTSWQQQNHNQPAQQVQQGQPSASFHPGQPYPQAYPPHPQPPALVHSAQYTLAHQQQQQPFEYVPASAPYADGSGALSQSGTSDSHFVVPVQTSQVYSVYHPHGDSYDPEMLAVYYRDRLGEAERAVGSLTHENNALRQEMDGRDAAYASNQQVVAAAVPQPQSQRGVYGTREEPKLHRGGTIDGGRHAWPGDELDNAMSRELDVARERIAALESDLQRAQRDLGNVVHLQHECNRIAQYERLMKEEQATVKESVDYLLD # ORIGINAL: g3110.t1 original gene structure, not modified by PASA NODE_21373_length_132_cov_27.193_potentialcontaminant AUGUSTUS gene 2 132 . + . ID=g3110;Name=g3110.t1 NODE_21373_length_132_cov_27.193_potentialcontaminant AUGUSTUS mRNA 2 132 . + . ID=g3110.t1;Parent=g3110;Name=g3110.t1 NODE_21373_length_132_cov_27.193_potentialcontaminant AUGUSTUS exon 2 132 . + . ID=g3110.t1.exon1;Parent=g3110.t1 NODE_21373_length_132_cov_27.193_potentialcontaminant AUGUSTUS CDS 2 132 . + 0 ID=cds.g3110.t1;Parent=g3110.t1 #PROT g3110.t1 g3110 QRNQAYYRDEKSKLRDEKNKLRDEKNKLRDEKNKLRDKENILL # ORIGINAL: g11230.t1 original gene structure, not modified by PASA NODE_3735_length_2864_cov_32.1555 AUGUSTUS gene 846 2675 . + . ID=g11230;Name=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS mRNA 846 2675 . + . ID=g11230.t1;Parent=g11230;Name=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS exon 846 915 . + . ID=g11230.t1.exon1;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS CDS 846 915 . + 0 ID=cds.g11230.t1;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS exon 1219 1288 . + . ID=g11230.t1.exon2;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS CDS 1219 1288 . + 2 ID=cds.g11230.t1;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS exon 1836 1957 . + . ID=g11230.t1.exon3;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS CDS 1836 1957 . + 1 ID=cds.g11230.t1;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS exon 2363 2518 . + . ID=g11230.t1.exon4;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS CDS 2363 2518 . + 2 ID=cds.g11230.t1;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS exon 2671 2675 . + . ID=g11230.t1.exon5;Parent=g11230.t1 NODE_3735_length_2864_cov_32.1555 AUGUSTUS CDS 2671 2675 . + 2 ID=cds.g11230.t1;Parent=g11230.t1 #PROT g11230.t1 g11230 MIVNPRPTRAEATDIFNACLDNTDCVMLSGETAKGAWPVEAVKVMASICRTAEEGIDYDELYLKLRKTVKFPLPIAESIASSAVKTSWDVNATLIIVLTDSGSTARFLAKYRPIAPILSVTSTHQTARQLQISRGVYPLE* # PASA_UPDATE: g1281.t1, single gene model update, valid-1, status:[pasa:asmbl_2906,status:3], valid-1 NODE_1884_length_8736_cov_42.5178 . gene 3205 5283 . + . ID=g1281;Name=g1281.t1 NODE_1884_length_8736_cov_42.5178 . mRNA 3205 5283 . + . ID=g1281.t1;Parent=g1281;Name=g1281.t1 NODE_1884_length_8736_cov_42.5178 . five_prime_UTR 3205 3292 . + . ID=g1281.t1.utr5p1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . exon 3205 3336 . + . ID=g1281.t1.exon1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . CDS 3293 3336 . + 0 ID=cds.g1281.t1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . exon 3550 3692 . + . ID=g1281.t1.exon2;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . CDS 3550 3692 . + 1 ID=cds.g1281.t1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . exon 4065 4206 . + . ID=g1281.t1.exon3;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . CDS 4065 4206 . + 2 ID=cds.g1281.t1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . exon 4702 5283 . + . ID=g1281.t1.exon4;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . CDS 4702 4906 . + 1 ID=cds.g1281.t1;Parent=g1281.t1 NODE_1884_length_8736_cov_42.5178 . three_prime_UTR 4907 5283 . + . ID=g1281.t1.utr3p1;Parent=g1281.t1 #PROT g1281.t1 g1281 MASTVGGFAFGVLPRWVGKWHGDRLAIIDHQDQQTTVCTVKFAHDPAAGEWLERRTVTDHNGVTTTSHFRVRPIGNGVAEMSTDSPNLEKCEMRIVEQDHSVATIYVVDRESGRLVSLETVTLTGANDDRRTRVIQRFDDNGQLVQLFAAHEGRNRDATTPASDAEREDSGPVVEDA* # ORIGINAL: g1282.t1 original gene structure, not modified by PASA NODE_1884_length_8736_cov_42.5178 AUGUSTUS gene 5561 8720 . + . ID=g1282;Name=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS mRNA 5561 8720 . + . ID=g1282.t1;Parent=g1282;Name=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 5561 5814 . + . ID=g1282.t1.exon1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 5561 5814 . + 0 ID=cds.g1282.t1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 5974 6042 . + . ID=g1282.t1.exon2;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 5974 6042 . + 1 ID=cds.g1282.t1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 6351 7011 . + . ID=g1282.t1.exon3;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 6351 7011 . + 1 ID=cds.g1282.t1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 7112 7579 . + . ID=g1282.t1.exon4;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 7112 7579 . + 0 ID=cds.g1282.t1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 8017 8198 . + . ID=g1282.t1.exon5;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 8017 8198 . + 0 ID=cds.g1282.t1;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS exon 8294 8720 . + . ID=g1282.t1.exon6;Parent=g1282.t1 NODE_1884_length_8736_cov_42.5178 AUGUSTUS CDS 8294 8720 . + 1 ID=cds.g1282.t1;Parent=g1282.t1 #PROT g1282.t1 g1282 MDPRFTYLFRKEERFIDIPLRFVPNPTVEVLLILVRTANRHDEISPEVRAQDRDGVNTEWHVDLVDLLDDKLVYHFKEVDGLKFRCPALQHKLIAKVCDAVMLLDDHTESVQRMLGTTDRFFNLTLTKFDDLTLTMAPGANAAAVLHAWERALEIMVRYPPDVESVCAPEFPIHALKVMLLTDAFLASAGLVRTVYPQWNLRSLSYRLPERFVDFAALIRDSHACCYFPFLLTEVAPEYRPTDCDHKDTKKMGRMLGLCVEAIMQNLTDVCEPQELHEVRVFGFLFSGDEVEVVAAVPHIVEDGSIVCMTTIFCEKLDMIALTSGEGVNLEVPSGGPSHPAPTPVAKTTSATEASKTSATETSMTVSATITTSTSNGKGSRAQGGGHTDPTSSGQRKSEQKGNTTSKDASGSRARKKIPPPQQDELGVNGNQNCLAVGLASTSSESGIIACNSSPTGALDTIRLFMACVRAAGIAGHPSREVYDGLCFLRDSLEALLCLHSAGYMHLDLKIGCMLFDWGLVRWRLVDFDLVARMVLHAEEALALGVNVVGMCMLYPSLSDCIRDTWLQNRLSVDPLTESQCQFHDGRCSAASDLFGLGVAAHEMYKNACRLVRDETDEWRVFLSVVFQMWKGNPKDRGTVAGVLQTVRGELHRLCGDCDTPSLPEWMRVNAASRREMQWRRRGRWV* # PASA_UPDATE: g1280.t1, single gene model update, valid-1, status:[pasa:asmbl_2905,status:12], valid-1 NODE_1884_length_8736_cov_42.5178 . gene 167 2719 . + . ID=g1280;Name=g1280.t1 NODE_1884_length_8736_cov_42.5178 . mRNA 167 2719 . + . ID=g1280.t1;Parent=g1280;Name=g1280.t1 NODE_1884_length_8736_cov_42.5178 . exon 167 287 . + . ID=g1280.t1.exon1;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . CDS 167 287 . + 0 ID=cds.g1280.t1;Parent=g1280.t1;5_prime_partial=true NODE_1884_length_8736_cov_42.5178 . exon 580 677 . + . ID=g1280.t1.exon2;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . CDS 580 677 . + 2 ID=cds.g1280.t1;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . exon 1041 1369 . + . ID=g1280.t1.exon3;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . CDS 1041 1369 . + 0 ID=cds.g1280.t1;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . exon 1572 1665 . + . ID=g1280.t1.exon4;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . CDS 1572 1665 . + 1 ID=cds.g1280.t1;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . exon 1841 2719 . + . ID=g1280.t1.exon5;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . CDS 1841 2647 . + 0 ID=cds.g1280.t1;Parent=g1280.t1 NODE_1884_length_8736_cov_42.5178 . three_prime_UTR 2648 2719 . + . ID=g1280.t1.utr3p1;Parent=g1280.t1 #PROT g1280.t1 g1280 IACLHARLHNLHRIYFGGFFIRGHPDTMHTISYGVNFWSGGTIDALFLRHEGNLGAVGAFLKNAAPIGDGAKESRASLSSVRFCHGHTAPIPAYPLLRCAPFPALADFSSYCPDTFLLDDEEGNEGGEGSIREFWLSTFERTLPRIKQQIIDCYGGSRQVHQRADEFEERFRLILTNMRNRGSATVSSPREIFDVRQRCLVECGVPDPYLRIKQRDNDSALALLGDRLVFLDALDARERQHALLEGVLAGNMYDWDASAILELIQSNGSLDFEAARAFLRRPWLVDDSLPWMRRVGVEPGASSAGSEGLPTAPPHKKAVIFVDNSGADVVLGVLPLARDMILRGTDVILAANSRAALNDVTHAELVVLVDRAGSICRVFADSLANGKLSIMETGSGSPCLDLRHVDGSLADACSDCDLVVLVGMGRALHTNFHARLSCESLKLAVIKNQRVAELFGGRIYDVVCRYELPDADATPRERTVSL* # ORIGINAL: g6869.t1 original gene structure, not modified by PASA NODE_5035_length_1064_cov_25.5723 AUGUSTUS gene 176 785 . + . ID=g6869;Name=g6869.t1 NODE_5035_length_1064_cov_25.5723 AUGUSTUS mRNA 176 785 . + . ID=g6869.t1;Parent=g6869;Name=g6869.t1 NODE_5035_length_1064_cov_25.5723 AUGUSTUS exon 176 299 . + . ID=g6869.t1.exon1;Parent=g6869.t1 NODE_5035_length_1064_cov_25.5723 AUGUSTUS CDS 176 299 . + 1 ID=cds.g6869.t1;Parent=g6869.t1 NODE_5035_length_1064_cov_25.5723 AUGUSTUS exon 588 785 . + . ID=g6869.t1.exon2;Parent=g6869.t1 NODE_5035_length_1064_cov_25.5723 AUGUSTUS CDS 588 785 . + 0 ID=cds.g6869.t1;Parent=g6869.t1 #PROT g6869.t1 g6869 SAQAMDNAADFLPSDARLFGSGVRVVLMIPIAVFALGCHLQVVPVFAGVREDRSSGFSTVLWCTVASCGTLYLITGTFGYAQFGSATKGNILSNFGVDDNLVSCAT* # ORIGINAL: g5918.t1 original gene structure, not modified by PASA NODE_3645_length_3043_cov_36.4646 AUGUSTUS gene 767 1852 . - . ID=g5918;Name=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS mRNA 767 1852 . - . ID=g5918.t1;Parent=g5918;Name=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS exon 1781 1852 . - . ID=g5918.t1.exon1;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS CDS 1781 1852 . - 0 ID=cds.g5918.t1;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS exon 1401 1521 . - . ID=g5918.t1.exon2;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS CDS 1401 1521 . - 0 ID=cds.g5918.t1;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS exon 1149 1243 . - . ID=g5918.t1.exon3;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS CDS 1149 1243 . - 2 ID=cds.g5918.t1;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS exon 767 913 . - . ID=g5918.t1.exon4;Parent=g5918.t1 NODE_3645_length_3043_cov_36.4646 AUGUSTUS CDS 767 913 . - 0 ID=cds.g5918.t1;Parent=g5918.t1 #PROT g5918.t1 g5918 MGLTLDHGTESLALLYLATVQGIAYGTRHILDEMNRCGHSIRSVYVCGGLSKNALFVKQHSDIAGMPLVLSREDEPILVGAAVLGARASGNFNCIQDAMAAMNAAGRTVTPTQSTLVNAFHERKYRVFHKMYQHFMECRALMSE* # ORIGINAL: g10948.t1 original gene structure, not modified by PASA NODE_4749_length_1274_cov_36.4804 AUGUSTUS gene 227 1121 . - . ID=g10948;Name=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS mRNA 227 1121 . - . ID=g10948.t1;Parent=g10948;Name=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS exon 994 1121 . - . ID=g10948.t1.exon1;Parent=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS CDS 994 1121 . - 0 ID=cds.g10948.t1;Parent=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS exon 700 724 . - . ID=g10948.t1.exon2;Parent=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS CDS 700 724 . - 1 ID=cds.g10948.t1;Parent=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS exon 227 484 . - . ID=g10948.t1.exon3;Parent=g10948.t1 NODE_4749_length_1274_cov_36.4804 AUGUSTUS CDS 227 484 . - 0 ID=cds.g10948.t1;Parent=g10948.t1 #PROT g10948.t1 g10948 MKGKRHYEDEETLDVNPLTDPENFSAPVNMEEDTGRRRRSASGDKRGSDSEDDGDEDDEEGDEDDSSEEEEEEEEEGDGRRSRLRGTDAQKAAFTKAYEAFMEGRGTAVKKVPQLGYKNVDLYKLYNLVTEKGGMEQ # ORIGINAL: g6251.t1 original gene structure, not modified by PASA NODE_1112_length_13874_cov_42.3616 AUGUSTUS gene 207 2368 . + . ID=g6251;Name=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS mRNA 207 2368 . + . ID=g6251.t1;Parent=g6251;Name=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS exon 207 514 . + . ID=g6251.t1.exon1;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS CDS 207 514 . + 0 ID=cds.g6251.t1;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS exon 728 874 . + . ID=g6251.t1.exon2;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS CDS 728 874 . + 1 ID=cds.g6251.t1;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS exon 1250 1383 . + . ID=g6251.t1.exon3;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS CDS 1250 1383 . + 1 ID=cds.g6251.t1;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS exon 1683 2368 . + . ID=g6251.t1.exon4;Parent=g6251.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS CDS 1683 2368 . + 2 ID=cds.g6251.t1;Parent=g6251.t1 #PROT g6251.t1 g6251 MPNEAGYVDFLGVRKVPIGELPMSAFLSDGEESVADVTEEVRRIALSDRDIYDKGRQALVSYFRAYKEHKCSLIFRPKDVDLGGVAMCYALVRMPRMPELKNCNVSSFTAPNAAVDSIPYKDKQREKHRLEKLKVAKEEAAKREVERANRVKLQKGQEAWSKKKDKKDRKLKRREVKLRVAEAKQRADIEKSKALADSIQEWKDLQREALLLKKLKTGKITEDEYDEMMMELGDNGSGGDASDVENGADDVLEGDGDSDDSDAPREAKGRRKAPGGAISGDFEFEDSGSDDSDSGEDVDDAQRSGLVDGDESDASWDSVDYSDGVAVECSDKNGYCESTTPGDDPMSEGDDVEGDSTTADVVARDTAHAAQSDAGRKRKADDDGSGDHCDEASHVVEGGAAKKRKQQRKKKTPANRLHRPITKL* # PASA_UPDATE: g6253.t1, single gene model update, valid-1, status:[pasa:asmbl_431,status:3], valid-1 NODE_1112_length_13874_cov_42.3616 . gene 7107 11767 . - . ID=g6253;Name=g6253.t1 NODE_1112_length_13874_cov_42.3616 . mRNA 7107 11767 . - . ID=g6253.t1;Parent=g6253;Name=g6253.t1 NODE_1112_length_13874_cov_42.3616 . five_prime_UTR 11523 11767 . - . ID=g6253.t1.utr5p1;Parent=g6253.t1 NODE_1112_length_13874_cov_42.3616 . exon 7933 11767 . - . ID=g6253.t1.exon1;Parent=g6253.t1 NODE_1112_length_13874_cov_42.3616 . CDS 7933 11522 . - 0 ID=cds.g6253.t1;Parent=g6253.t1 NODE_1112_length_13874_cov_42.3616 . exon 7107 7755 . - . ID=g6253.t1.exon2;Parent=g6253.t1 NODE_1112_length_13874_cov_42.3616 . CDS 7335 7755 . - 1 ID=cds.g6253.t1;Parent=g6253.t1 NODE_1112_length_13874_cov_42.3616 . three_prime_UTR 7107 7334 . - . ID=g6253.t1.utr3p1;Parent=g6253.t1 #PROT g6253.t1 g6253 MAAVMPTRISPSPSLGTATSPSAARSRSPRLNQKKECASDGDSQHNQSPRSPHLSVPGGSAATPLNGNDGIADADSMLFVASTHGHVDKVRFLIERGVDVNHRSGPSLETALMAACRWGHGTIAQMLIAAGADTSIQNADGWTALMFCAFNNNQNLIRLLVRGVVDDAPVASISSASGSSLLSPRAGRSASRGGDRDASGIATDGSLVLRHSPVSMLSDGSGGHLVASASNTLITAGMSPSAMRRAAASGSRASSPMVVSVDYGQSAARRLEELFRAVKAGNAEFVGWLLANEEVNIDARDPQSGLTPLMVAATFSKKSIVSVLLFHGADASVHNRDKQTVLDLVGGDMRHSLISSMCRRHERAPTNKDLLNASWIGAQAVVASVLAVASSHGIDSNYRNCDGYTPLLLATRDMDALKRMNYSEARKGTAFRYGDVIRTLIRSHANVNVRLEADQTTALHFAAGSRQTDVVARLLEGGASVHAIDAHANQPIHIAVASGTLDIVKALFAHGASVNVRGFGGDSPLHIAAVAGNSHAATFLIECGASTTATDVHGKTAMEVCKTDAVRRTLNECLHKRQSIKNGTVKASIQEMVTKARADTKPKLLHQQSGGIASQSQGQSPVTTKEVTPFVAPPSQLSSNAAASSVPSHAPLKATQSRVERVPLSMAVPLTLSDAVAVPLSCGSRTGRVQYAGGQWRPNPRLDGAFNTDATTESPLSHPAWSRPTGHGHGGHPTKAHPGDGDSDSSAYAAFRSRVNMSPHKGLMARAHTSNRLLHVPPPVAAVANAPSSGPSTPGGLPTVPASPRRGTLTHALPPICASPTRSEDTNKAAAASSGADSVAAQPLTRQNVAVIASQPPSEVLTPPATDALTSLAAACDGDSDARRMVMWQRRRTDSEFAIVDRRNNNAGNDPLEDASSQDEHGHLRVRMRSSSAPQPSIRRRARTSSNGSTTSTSSTVSTISTSGGTIGLSGSIGGGGGAGAAAFAPLNMSVDVFGNAVVQQGGSSVDGEVTPGSDGVSIIVSASGSPLSDDGSAQSGFNSNSSVEGIECSKGSGSVALLQAPAKSGSRTRIKPPLSYKLGQVLGKGAFGTVYMGIDERTGEFVAIKRVELANEEAIAALEKEISLLRNLRHPRIVRYLGTDRSEKSSISILMEYVSGGSIAQLIRKVGPIGERVARRYLKQILEGVAYLHENNVMHRDVKSANVLVDSRGSVRLADFGASKLMGSSASDRPFDSGSVMGTPFFLAPEIVRQQSYGLKADVWSVGATALEMLTGNPPYHSMGPVAAIFQIGCGNLPVLPSGVSRECLDFLQRCFEIDPKNRPTAKELIGHPFCSSSD* # ORIGINAL: g6252.t1 original gene structure, not modified by PASA NODE_1112_length_13874_cov_42.3616 AUGUSTUS gene 4591 4986 . + . ID=g6252;Name=g6252.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS mRNA 4591 4986 . + . ID=g6252.t1;Parent=g6252;Name=g6252.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS exon 4591 4986 . + . ID=g6252.t1.exon1;Parent=g6252.t1 NODE_1112_length_13874_cov_42.3616 AUGUSTUS CDS 4591 4986 . + 0 ID=cds.g6252.t1;Parent=g6252.t1 #PROT g6252.t1 g6252 MVLGYVPEAPAAAALAQEAKGESETSTIQEADVGLQANLTLGAPFIICISGFNCGTYCCAGSVCCQRFQGCCASGETCASDRAGCYTGDSDSSSLSIGAIVGIVIGCIVALLCCGAMCKSMMKSGGYTSIN* # ORIGINAL: g10403.t1 original gene structure, not modified by PASA NODE_3041_length_4469_cov_56.6796 AUGUSTUS gene 104 3672 . + . ID=g10403;Name=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS mRNA 104 3672 . + . ID=g10403.t1;Parent=g10403;Name=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 104 240 . + . ID=g10403.t1.exon1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 104 240 . + 2 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 457 584 . + . ID=g10403.t1.exon2;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 457 584 . + 0 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 924 1110 . + . ID=g10403.t1.exon3;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 924 1110 . + 1 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 1800 1880 . + . ID=g10403.t1.exon4;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 1800 1880 . + 0 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 2178 2273 . + . ID=g10403.t1.exon5;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 2178 2273 . + 0 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 2626 2717 . + . ID=g10403.t1.exon6;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 2626 2717 . + 0 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 2897 2974 . + . ID=g10403.t1.exon7;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 2897 2974 . + 1 ID=cds.g10403.t1;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS exon 3504 3672 . + . ID=g10403.t1.exon8;Parent=g10403.t1 NODE_3041_length_4469_cov_56.6796 AUGUSTUS CDS 3504 3672 . + 1 ID=cds.g10403.t1;Parent=g10403.t1 #PROT g10403.t1 g10403 RWLMPDRSLATQDITHKAMLTYQAKYLTMPPSLKDEKALVLYFGQISRLIANETYTTSEAEAVLLAAYHVQALHGDNDPKRHRPGFLSTTELASVIPMRLIRVYKDTYLHLRIFSIHVRLRGLSKPQAMVAYLQRCSRIPMFGSTVFKVKSGAAMHLGVADDCILAAYASPTHLTHGDWRMFPYSEISSVSLSNDGVEIHRKAVAKGESRALQITCPRGMAIGIVDLAREYRQMADISPRSDVPKRRLIDGAHSKLEMLKAAYVDCIKLHKSSAMSEIIHQIDDFIDSERVMDELDLRGMQFEASTFAPLAVAVRRVFDYK* # PASA_UPDATE: g4637.t1, single gene model update, valid-1, status:[pasa:asmbl_4643,status:3], valid-1 NODE_2608_length_5692_cov_38.5339 . gene 65 3271 . + . ID=g4637;Name=g4637.t1 NODE_2608_length_5692_cov_38.5339 . mRNA 65 3271 . + . ID=g4637.t1;Parent=g4637;Name=g4637.t1 NODE_2608_length_5692_cov_38.5339 . five_prime_UTR 65 949 . + . ID=g4637.t1.utr5p1;Parent=g4637.t1 NODE_2608_length_5692_cov_38.5339 . exon 65 3271 . + . ID=g4637.t1.exon1;Parent=g4637.t1 NODE_2608_length_5692_cov_38.5339 . CDS 950 3208 . + 0 ID=cds.g4637.t1;Parent=g4637.t1 NODE_2608_length_5692_cov_38.5339 . three_prime_UTR 3209 3271 . + . ID=g4637.t1.utr3p1;Parent=g4637.t1 #PROT g4637.t1 g4637 MTPAPITSGVRGSRHRAQPPLDGVAKERCESLLKTIVDEYAASRSVPAQPPQAGRSALGMWSRPKVAPCRINPCNANSFMVFSNRFRALLRKRMPNETNGNLSKALSQLWSVMPDLHKATFRAAAKKLRQEAIASVSFGGARQALQQPTPLAPATRGGASLGADTTHELQCDGATQQRAESQGSPSSSDDAMGTFAESDGQQRRNYTATRVDSWNARTSIAPHSAKAPLSATTRYQSEAAEDAESRASGYAGGLWADHSVPRARPVHSNISPRPTAARLTPVSSESAQGKNGIKGLPPAGVSLKARQRSAVHSFKHELIDIAAVAALCKISCLNHNCLSVHTDPQFSAMEQTQAKLMFAPSTRTSAAADSDEYTKGVHSVRRLCATATAVDSTPQPSQAHFGHSRGTRDANAGRHNDSASCDAPSLHTAQTNVNGASDHAAAAHALSAHNHVAPIGQHDRNWSDFRPSSRADAGDTAARNGAWRGKIPSSTTAALHALFFGHDDSELRRDWGRVARDAESIFPTTLPRRFKTEDHIDATSTQTASPHATAQQFPFARTFGDDPLCYIPSVSLGVDSHSHGRHAIAGVGVGVTAIAGICAWPLTAAPTPNLVVRREHTTVAVRYPEVQEPLNAYAQSQAHSHEDARLMQPPWQHVLQVSPNHMHAIATADTLPLDDPTEGKWPGSVDIVDVYGLMTAPAPAMSGHHSDSDDDNSRNVIMAEVRSAMEALHDLCVQWGVSPLENHTWRMNVVLL* # PASA_UPDATE: g4638.t1, single gene model update, valid-1, status:[pasa:asmbl_4642,status:12],[pasa:asmbl_4644,status:13], valid-1 NODE_2608_length_5692_cov_38.5339 . gene 3522 5593 . - . ID=g4638;Name=g4638.t1 NODE_2608_length_5692_cov_38.5339 . mRNA 3522 5593 . - . ID=g4638.t1;Parent=g4638;Name=g4638.t1 NODE_2608_length_5692_cov_38.5339 . five_prime_UTR 5593 5593 . - . ID=g4638.t1.utr5p1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . exon 5547 5593 . - . ID=g4638.t1.exon1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . CDS 5547 5592 . - 0 ID=cds.g4638.t1;Parent=g4638.t1;5_prime_partial=true NODE_2608_length_5692_cov_38.5339 . exon 4952 5251 . - . ID=g4638.t1.exon2;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . CDS 4952 5251 . - 2 ID=cds.g4638.t1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . exon 4633 4722 . - . ID=g4638.t1.exon3;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . CDS 4633 4722 . - 2 ID=cds.g4638.t1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . exon 4261 4379 . - . ID=g4638.t1.exon4;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . CDS 4261 4379 . - 2 ID=cds.g4638.t1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . exon 3522 4144 . - . ID=g4638.t1.exon5;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . CDS 3764 4144 . - 0 ID=cds.g4638.t1;Parent=g4638.t1 NODE_2608_length_5692_cov_38.5339 . three_prime_UTR 3522 3763 . - . ID=g4638.t1.utr3p1;Parent=g4638.t1 #PROT g4638.t1 g4638 CSTNGFTPQPAVPRTGLKPRQPSVRCKFCGLKIRVERADTSTLPPLSSVDAGDASVVVPLSLPPFAERVPAELSLHCAECARPWFRRGKLVVSSASRASRLLLVAGDGDDNEEGRDTSEGMDVDVAEPVSAAVMGGGGEHSDPHRAMGLMPTPQLQWAMDAAASVDTPLPDSARDRQLVIDALLKACVAFGRDLLVSAAAASEVHASRWAETVAARAKNAQSNNNRKRRHSAMMEGEEDISGENEDEQSDEADGDGSRALRRKTHSHGLVVPAHVYTAANLCERFDFLTSAYMGREKKMMEKSEKKAMELR* # ORIGINAL: g9191.t1 original gene structure, not modified by PASA NODE_1838_length_8977_cov_44.5536 AUGUSTUS gene 4497 8540 . - . ID=g9191;Name=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS mRNA 4497 8540 . - . ID=g9191.t1;Parent=g9191;Name=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 8422 8540 . - . ID=g9191.t1.exon1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 8422 8540 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 7960 8284 . - . ID=g9191.t1.exon2;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 7960 8284 . - 1 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 7713 7880 . - . ID=g9191.t1.exon3;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 7713 7880 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 7365 7406 . - . ID=g9191.t1.exon4;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 7365 7406 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 7171 7269 . - . ID=g9191.t1.exon5;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 7171 7269 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 7028 7073 . - . ID=g9191.t1.exon6;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 7028 7073 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 6799 6920 . - . ID=g9191.t1.exon7;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 6799 6920 . - 2 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 6620 6722 . - . ID=g9191.t1.exon8;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 6620 6722 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 6428 6506 . - . ID=g9191.t1.exon9;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 6428 6506 . - 2 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 6217 6346 . - . ID=g9191.t1.exon10;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 6217 6346 . - 1 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 5834 5940 . - . ID=g9191.t1.exon11;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 5834 5940 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 5387 5748 . - . ID=g9191.t1.exon12;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 5387 5748 . - 1 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 5081 5298 . - . ID=g9191.t1.exon13;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 5081 5298 . - 2 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 4693 5003 . - . ID=g9191.t1.exon14;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 4693 5003 . - 0 ID=cds.g9191.t1;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS exon 4497 4575 . - . ID=g9191.t1.exon15;Parent=g9191.t1 NODE_1838_length_8977_cov_44.5536 AUGUSTUS CDS 4497 4575 . - 1 ID=cds.g9191.t1;Parent=g9191.t1 #PROT g9191.t1 g9191 MARDPECSNEIRIMGGIPLLLSLLGGPSGGKEVHGRDAQGGMSAPASDRRRGSSDALGGPQLHHAHQGQPQSPSPAAQQATKPPKERRKDIALRIACCAALTQLALNDTNAHHIRLANGIYAIGLLILPQKGAENDSQYRNLQASVVAANAFRALRFLFSVERNRRLFKRLFPAELFEVFIDVGHYCTDISLYMPMVNFVYEMPVRKQGAQSFLALKEIPTKNSAVLGKTAMERDKSVGEIVNEVSIIESQMRHPNVVRYYKSFVEGDMLYIIMEYVEGASLSDYFNSLKEKNKTMPEDRIWKIFVQVVLGLRYIHKEKRIVHRDLTPANIMLDENDNVKITDFGLARQKQHDASVMQSVVGTIVYSCPEIIQHEPYGEKADVWSLGCILYQMATLKPPFFSSNMLSLATRVCSLIAPILVGEIDRLNIDRLNTERELERERKRTQRHFNEASRNMQNYHRLFLASQERYDKMITMLEENRLVGAVEDAHGPQLPGSPSVLPNGPRSASGGALGAGLTASARTKGRDKAVDSGTLSPDEGRDVRGSPATPYRRSNSNASSGSRTPRPVTATATLTISPRKVRQINDPISQMLNQLHKIIFITQLPPSADHNPARRVIEKYKRALFSAQSSTFNLKSELKKFLIGSKDIIDLDFGSGLNELQLGRQGAANGVPAASQASQPPPTVMQMTHTDDGSVMAAAPSMTQIGSRQGGEVEERPRLTYEQMQNLIEVVLVESGYYDLMSPRNRAQALGPIGAGSPGHQARLRSLTS* # PASA_UPDATE: g9189.t1, single gene model update, valid-1, status:[pasa:asmbl_2771,status:3], valid-1 NODE_1838_length_8977_cov_44.5536 . gene 688 1639 . + . ID=g9189;Name=g9189.t1 NODE_1838_length_8977_cov_44.5536 . mRNA 688 1639 . + . ID=g9189.t1;Parent=g9189;Name=g9189.t1 NODE_1838_length_8977_cov_44.5536 . five_prime_UTR 688 732 . + . ID=g9189.t1.utr5p1;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . exon 688 749 . + . ID=g9189.t1.exon1;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . CDS 733 749 . + 0 ID=cds.g9189.t1;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . exon 1123 1405 . + . ID=g9189.t1.exon2;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . CDS 1123 1405 . + 1 ID=cds.g9189.t1;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . exon 1503 1639 . + . ID=g9189.t1.exon3;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . CDS 1503 1526 . + 0 ID=cds.g9189.t1;Parent=g9189.t1 NODE_1838_length_8977_cov_44.5536 . three_prime_UTR 1527 1639 . + . ID=g9189.t1.utr3p1;Parent=g9189.t1 #PROT g9189.t1 g9189 MPQPVRLYTKGVVLGHRRNMRNQDPSTQLLRIEGVESKEATAHYLGKRIAYVYRAQRKVKDSKIRVIWGKVTRPHGNGGVVRAKFSPALPARTFGASVRVLLYPSRV* # PASA_UPDATE: g9190.t1, single gene model update, valid-1, status:[pasa:asmbl_2769,status:3], valid-1 # PASA_UPDATE: g9190.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2770,status:3], valid-1 NODE_1838_length_8977_cov_44.5536 . gene 1732 4176 . - . ID=g9190;Name=g9190.t1 NODE_1838_length_8977_cov_44.5536 . mRNA 1732 4176 . - . ID=g9190.t1;Parent=g9190;Name=g9190.t1 NODE_1838_length_8977_cov_44.5536 . five_prime_UTR 4116 4176 . - . ID=g9190.t1.utr5p1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . five_prime_UTR 3562 3595 . - . ID=g9190.t1.utr5p2;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 4116 4176 . - . ID=g9190.t1.exon1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 3345 3595 . - . ID=g9190.t1.exon2;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . CDS 3345 3561 . - 0 ID=cds.g9190.t1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 2833 3237 . - . ID=g9190.t1.exon3;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . CDS 2833 3237 . - 2 ID=cds.g9190.t1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 2211 2716 . - . ID=g9190.t1.exon4;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . CDS 2211 2716 . - 2 ID=cds.g9190.t1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 1971 2118 . - . ID=g9190.t1.exon5;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . CDS 1971 2118 . - 0 ID=cds.g9190.t1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . exon 1732 1822 . - . ID=g9190.t1.exon6;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . CDS 1812 1822 . - 2 ID=cds.g9190.t1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . three_prime_UTR 1732 1811 . - . ID=g9190.t1.utr3p1;Parent=g9190.t1 NODE_1838_length_8977_cov_44.5536 . mRNA 1732 4176 . - . ID=g9190.t1.1.5b6be70a;Parent=g9190;Name=g9190.t1 NODE_1838_length_8977_cov_44.5536 . five_prime_UTR 3562 4176 . - . ID=g9190.t1.1.5b6be70a.utr5p1;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . exon 3345 4176 . - . ID=g9190.t1.1.5b6be70a.exon1;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . CDS 3345 3561 . - 0 ID=cds.g9190.t1.1.5b6be70a;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . exon 2833 3237 . - . ID=g9190.t1.1.5b6be70a.exon2;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . CDS 2833 3237 . - 2 ID=cds.g9190.t1.1.5b6be70a;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . exon 2211 2716 . - . ID=g9190.t1.1.5b6be70a.exon3;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . CDS 2211 2716 . - 2 ID=cds.g9190.t1.1.5b6be70a;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . exon 1971 2118 . - . ID=g9190.t1.1.5b6be70a.exon4;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . CDS 1971 2118 . - 0 ID=cds.g9190.t1.1.5b6be70a;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . exon 1732 1822 . - . ID=g9190.t1.1.5b6be70a.exon5;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . CDS 1812 1822 . - 2 ID=cds.g9190.t1.1.5b6be70a;Parent=g9190.t1.1.5b6be70a NODE_1838_length_8977_cov_44.5536 . three_prime_UTR 1732 1811 . - . ID=g9190.t1.1.5b6be70a.utr3p1;Parent=g9190.t1.1.5b6be70a #PROT g9190.t1 g9190 MATDNNDVDNELLDYEEDDNEAPAGEAAGDKKDKKDVKGSYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGQDVICQAKSGMGKTAVFVLSTLHQLEPVDGQVGVLVLCHTRELAFQISHEYGRFSKYMPNVKTAVFFGGVSIKQDEKTLKTATPHIVVGTPGRILALVKQNTLNLKHVKHFVLDECDRMLEAIDMRRDVQEIFRKTPHEKQVMMFSATLSNEVRPVCKKFMQDPMEIYVDDEAKLTLHGLQQHYVKLGENEKNRKLSELLDALEFNQVVIFVKLVNRAVELTKLLIECNFPAITIHSGMSQEERIQRYKAFKEFNKRILVATDIFGRGMDIERVNIVINYDMPPDSDSYLHRVARAGRFGTKGLAISFVSDAKDSEVLEKVQGRFEVKITELPDQIDITSYMNA* #PROT g9190.t1.1.5b6be70a g9190 MATDNNDVDNELLDYEEDDNEAPAGEAAGDKKDKKDVKGSYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGQDVICQAKSGMGKTAVFVLSTLHQLEPVDGQVGVLVLCHTRELAFQISHEYGRFSKYMPNVKTAVFFGGVSIKQDEKTLKTATPHIVVGTPGRILALVKQNTLNLKHVKHFVLDECDRMLEAIDMRRDVQEIFRKTPHEKQVMMFSATLSNEVRPVCKKFMQDPMEIYVDDEAKLTLHGLQQHYVKLGENEKNRKLSELLDALEFNQVVIFVKLVNRAVELTKLLIECNFPAITIHSGMSQEERIQRYKAFKEFNKRILVATDIFGRGMDIERVNIVINYDMPPDSDSYLHRVARAGRFGTKGLAISFVSDAKDSEVLEKVQGRFEVKITELPDQIDITSYMNA* # ORIGINAL: g3074.t1 original gene structure, not modified by PASA NODE_6315_length_594_cov_57.6705_potentialcontaminant AUGUSTUS gene 2 246 . + . ID=g3074;Name=g3074.t1 NODE_6315_length_594_cov_57.6705_potentialcontaminant AUGUSTUS mRNA 2 246 . + . ID=g3074.t1;Parent=g3074;Name=g3074.t1 NODE_6315_length_594_cov_57.6705_potentialcontaminant AUGUSTUS exon 2 246 . + . ID=g3074.t1.exon1;Parent=g3074.t1 NODE_6315_length_594_cov_57.6705_potentialcontaminant AUGUSTUS CDS 2 246 . + 2 ID=cds.g3074.t1;Parent=g3074.t1 #PROT g3074.t1 g3074 ESNRAISDGLCAAIAGNKPVAVCHPVAAAPNACDQLKKKKHAQTGWLTVTTAFFDEFMPRQKRFSMSLARIPTRIAVLRC* # PASA_UPDATE: g486.t1, single gene model update, valid-1, status:[pasa:asmbl_199,status:12],[pasa:asmbl_200,status:12], valid-1 NODE_1052_length_14392_cov_50.794 . gene 7787 11848 . + . ID=g486;Name=g486.t1 NODE_1052_length_14392_cov_50.794 . mRNA 7787 11848 . + . ID=g486.t1;Parent=g486;Name=g486.t1 NODE_1052_length_14392_cov_50.794 . exon 7787 7806 . + . ID=g486.t1.exon1;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . CDS 7787 7806 . + 0 ID=cds.g486.t1;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . exon 7967 8095 . + . ID=g486.t1.exon2;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . CDS 7967 8095 . + 1 ID=cds.g486.t1;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . exon 8272 8315 . + . ID=g486.t1.exon3;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . CDS 8272 8315 . + 1 ID=cds.g486.t1;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . exon 8447 11319 . + . ID=g486.t1.exon4;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . CDS 8447 11319 . + 2 ID=cds.g486.t1;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . exon 11720 11848 . + . ID=g486.t1.exon5;Parent=g486.t1 NODE_1052_length_14392_cov_50.794 . CDS 11720 11848 . + 0 ID=cds.g486.t1;Parent=g486.t1 #PROT g486.t1 g486 MSVVSDRRSSMEGARYRPPMDGGRQPGPPPPFAHHDAGMRRRYSDEVDAREDPPSKRPRFAPHQGNGVHDHLAPPRSQDHRWRPADHDGFAPRRDPPIRPPHPPAPAHHYQQDSRPRSNSREGSGQPWTPNPERDARDRPDYRMPLPPNGHADPHADERRRSDPWAPNNPPRDAWQHGNPPRDRGDKWAGITGSYPPPRDNGRPPMREEFDRPWPPTQPQMDRDRDARRAPPPPPPFANANRRSDIGEGPYYAREAPIPPHRAVDPERDKLGAGRDQRKSFDRIADTRDRIPSERLPGAIAPLVPGPQTTSVDDREVHVVHVQIPLLASESASVVAHPPAAHSAQAASAPDVSAARPAAVPDVATLASAGAAIINSGQNAVSDGANSACATPQVDSGSAPQPHTDTQMKKSVSEVPADKDPRDIIKEREKGRFSWGFKATPTVSPAKPAAVSVLQSETNTKAPTPTPTPTAAARPSSNATAAPLGDANKVTKQRPVDSAATKAPSADKDDDIRNAPAAAKASLKSESESIPEKKGSTQTIVRLKVEPRDDVPDKQQQSPAKQAQTSPNNKVILHVRNSPSGQSSPRKHDDNGSNPRETMHAKALFGDFSRSVVAPPRVLGGTREERFASLVRVEVSNNGGASVFVVVENALDSLPKSEWRPFADACCRAMLSEEKGVPRFVLGVFRGGAKSVRNVLRTIVGEQPMLPVNVEAFGQPKMTHAMTLSEYVAGVDKTYNHGTHRAGGLRTISLVGTVQEERGGYFEEVIKELDDNPFMGTVMPWGPLSACKGISPDQSDDGPILWVRPGEQVVPLTELSSLDPKKAAAGEDAASRRKRRALESLAIRPRVERPREKLVEDRTGAHADHAGLFPDRHTIAAVGVLQSCAPPEKKRRNRRKIAATADAPGGDSGDETMSNSGCGDPSDVSESAGADVPALLPFAAMPSAAESAPTPHEVKDAICFHGSDMDRVAEMIGLDFNEEPMDQLLDSQCWIEDAKLNQMRRVGIRYSRVRLYADDVYILPRKVVHQFKTIGACVSVTWHLKYAPYYPNGLSELSSGGGMGMMRT* # PASA_UPDATE: g487.t1, single gene model update, valid-1, status:[pasa:asmbl_201,status:12], valid-1 NODE_1052_length_14392_cov_50.794 . gene 12423 14266 . - . ID=g487;Name=g487.t1 NODE_1052_length_14392_cov_50.794 . mRNA 12423 14266 . - . ID=g487.t1;Parent=g487;Name=g487.t1 NODE_1052_length_14392_cov_50.794 . exon 14253 14266 . - . ID=g487.t1.exon1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . CDS 14253 14266 . - 0 ID=cds.g487.t1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . exon 13980 14085 . - . ID=g487.t1.exon2;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . CDS 13980 14085 . - 1 ID=cds.g487.t1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . exon 13446 13642 . - . ID=g487.t1.exon3;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . CDS 13446 13642 . - 0 ID=cds.g487.t1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . exon 12936 13106 . - . ID=g487.t1.exon4;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . CDS 12936 13106 . - 1 ID=cds.g487.t1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . exon 12423 12635 . - . ID=g487.t1.exon5;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . CDS 12455 12635 . - 1 ID=cds.g487.t1;Parent=g487.t1 NODE_1052_length_14392_cov_50.794 . three_prime_UTR 12423 12454 . - . ID=g487.t1.utr3p1;Parent=g487.t1 #PROT g487.t1 g487 MDIATYSGLGGFIGVTAGFAVIFKQLMPEAQAGAVPLRVSMLPLTLVALVAAFTILGAAPYHELPFVIFGIYGAWMYLRYFQQKEGIKGDMSEAFSFTTFFPEALQPAVHVVSRITFTVFSKLRLIPRHVRTAEGDEYIVAGGSRGNVGGLQGIDPQDSERRRQIALRALDKRLNMAGIKSPAADGKAHHDGRSGAASPHNGDSSATPEPSEGGTVSVVIGK* # ORIGINAL: g485.t1 original gene structure, not modified by PASA NODE_1052_length_14392_cov_50.794 AUGUSTUS gene 2018 6513 . - . ID=g485;Name=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS mRNA 2018 6513 . - . ID=g485.t1;Parent=g485;Name=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 6456 6513 . - . ID=g485.t1.exon1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 6456 6513 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 6167 6312 . - . ID=g485.t1.exon2;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 6167 6312 . - 2 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 5810 5975 . - . ID=g485.t1.exon3;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 5810 5975 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 5453 5553 . - . ID=g485.t1.exon4;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 5453 5553 . - 2 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 5166 5215 . - . ID=g485.t1.exon5;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 5166 5215 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 4814 4961 . - . ID=g485.t1.exon6;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 4814 4961 . - 1 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 4536 4599 . - . ID=g485.t1.exon7;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 4536 4599 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 4110 4268 . - . ID=g485.t1.exon8;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 4110 4268 . - 2 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 3753 3874 . - . ID=g485.t1.exon9;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 3753 3874 . - 2 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 3472 3546 . - . ID=g485.t1.exon10;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 3472 3546 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 3037 3158 . - . ID=g485.t1.exon11;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 3037 3158 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 2653 2818 . - . ID=g485.t1.exon12;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 2653 2818 . - 1 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 2307 2408 . - . ID=g485.t1.exon13;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 2307 2408 . - 0 ID=cds.g485.t1;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 2018 2044 . - . ID=g485.t1.exon14;Parent=g485.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 2018 2044 . - 0 ID=cds.g485.t1;Parent=g485.t1 #PROT g485.t1 g485 MSVTSDEVNYLVYRYLLESGFVHSAFTFGNESHASRSNINGADVPPGALVTMLQKGLQYVEAETHLTEEGEEIPCDEPFSLLLTHTCRGKKRSRKDTKEKDGKEKKDKKKEVKRAKKEQGQAQQDMMEIVTENGPTTPASIDAPASSLITMDGHENEVFACAWNPVSTNLVASGSGDGTARVWDVSAYEAARDGNGEKPRPLVLRHSVPGEERGKDVTTLDWNGDGQTLATGCYDGNVRVWNLKGNLLNVLSQHKAPVFALKWNKKGDLLLSGSVDKTAIVWDAQAGTVKQIFAFHAAPTLDVDWRNNNSFATCSIDHTIHVCKLGEERPIKTFVGHASEVNAIKWDPTGTLLASCSDDSTAKIWSLKQDTVVHDLVEHTKEIYTLKWSPLLSSNSYGQQLLATASFDSTVRLWEMTKGSCVHTLARHTMPVYSVAFSPDGQFLASGSFDKTVLVWSVKDGSVVRKYNLQGGVFDVTWNPRGNKLAACTSDNLAYVLDWRM* # ORIGINAL: g484.t1 original gene structure, not modified by PASA NODE_1052_length_14392_cov_50.794 AUGUSTUS gene 109 686 . + . ID=g484;Name=g484.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS mRNA 109 686 . + . ID=g484.t1;Parent=g484;Name=g484.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 109 292 . + . ID=g484.t1.exon1;Parent=g484.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 109 292 . + 0 ID=cds.g484.t1;Parent=g484.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS exon 586 686 . + . ID=g484.t1.exon2;Parent=g484.t1 NODE_1052_length_14392_cov_50.794 AUGUSTUS CDS 586 686 . + 2 ID=cds.g484.t1;Parent=g484.t1 #PROT g484.t1 g484 VNIPADHLAFQMGEATQIRTGGRLRATPHCVHGAGGPAAVGVSRNTLAVFMQPNWDDVLTTNGLTPEEPSVGVKGYTPGQTFAEFSNEKFKEYY* # ORIGINAL: g9481.t1 original gene structure, not modified by PASA NODE_4964_length_1112_cov_30.162 AUGUSTUS gene 77 738 . + . ID=g9481;Name=g9481.t1 NODE_4964_length_1112_cov_30.162 AUGUSTUS mRNA 77 738 . + . ID=g9481.t1;Parent=g9481;Name=g9481.t1 NODE_4964_length_1112_cov_30.162 AUGUSTUS exon 77 277 . + . ID=g9481.t1.exon1;Parent=g9481.t1 NODE_4964_length_1112_cov_30.162 AUGUSTUS CDS 77 277 . + 0 ID=cds.g9481.t1;Parent=g9481.t1 NODE_4964_length_1112_cov_30.162 AUGUSTUS exon 559 738 . + . ID=g9481.t1.exon2;Parent=g9481.t1 NODE_4964_length_1112_cov_30.162 AUGUSTUS CDS 559 738 . + 0 ID=cds.g9481.t1;Parent=g9481.t1 #PROT g9481.t1 g9481 TEPMAILTEFVPYGDLKQFLSDERVRRQPMEAVEGQFKQFAQDIACGMQYLCESGIVHRDLAARNCLVGQDVMGSYVIKVSDFGLSRNLGDKSYYRITKVRRLPVKWYVDRRASSVASIMFAYVCV* # ORIGINAL: g5800.t1 original gene structure, not modified by PASA NODE_2853_length_4953_cov_39.3395 AUGUSTUS gene 1111 4648 . + . ID=g5800;Name=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS mRNA 1111 4648 . + . ID=g5800.t1;Parent=g5800;Name=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 1111 1244 . + . ID=g5800.t1.exon1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 1111 1244 . + 0 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 1487 1565 . + . ID=g5800.t1.exon2;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 1487 1565 . + 1 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 1891 2018 . + . ID=g5800.t1.exon3;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 1891 2018 . + 0 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 2469 2550 . + . ID=g5800.t1.exon4;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 2469 2550 . + 1 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 3049 3181 . + . ID=g5800.t1.exon5;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 3049 3181 . + 0 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 3440 3471 . + . ID=g5800.t1.exon6;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 3440 3471 . + 2 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 3709 3797 . + . ID=g5800.t1.exon7;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 3709 3797 . + 0 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 4149 4286 . + . ID=g5800.t1.exon8;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 4149 4286 . + 1 ID=cds.g5800.t1;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS exon 4498 4648 . + . ID=g5800.t1.exon9;Parent=g5800.t1 NODE_2853_length_4953_cov_39.3395 AUGUSTUS CDS 4498 4648 . + 1 ID=cds.g5800.t1;Parent=g5800.t1 #PROT g5800.t1 g5800 MAQEGTLSFVVKWSGKEYNVELSANARMDELKANLQEQTGVQAPRQKLLGITYHGKPPADDVRLYDTNLKQGQKVMMMGTREENIAAAVAPADTPEVFNDLDLPDEATIGVEHRDDNLNKVEGRIAAYKIKELNAPRPGKKLLVLDVDYTLYDHRSTAENLGTLIRPYLHEFLESVYPHYDIVIWSATSMKWVELKMKEFGSLSHPNYKITFLLDYYAMITVQSEAYGVVEVKPLGVVWGKYPETYSPKNTIMFDDIRRNFLMNPRNGLKIRPFRNAPMNRNEDEELLHLTRYLLAIREVDDLTTLNHSDWENYVRRHARR* # PASA_UPDATE: g7993.t1, single gene model update, valid-1, status:[pasa:asmbl_9989,status:12], valid-1 NODE_919_length_15880_cov_38.693 . gene 479 2364 . - . ID=g7993;Name=g7993.t1 NODE_919_length_15880_cov_38.693 . mRNA 479 2364 . - . ID=g7993.t1;Parent=g7993;Name=g7993.t1 NODE_919_length_15880_cov_38.693 . five_prime_UTR 2083 2364 . - . ID=g7993.t1.utr5p1;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . exon 1780 2364 . - . ID=g7993.t1.exon1;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . CDS 1780 2082 . - 0 ID=cds.g7993.t1;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . exon 1402 1479 . - . ID=g7993.t1.exon2;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . CDS 1402 1479 . - 0 ID=cds.g7993.t1;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . exon 982 1140 . - . ID=g7993.t1.exon3;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . CDS 982 1140 . - 0 ID=cds.g7993.t1;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . exon 479 575 . - . ID=g7993.t1.exon4;Parent=g7993.t1 NODE_919_length_15880_cov_38.693 . CDS 479 575 . - 0 ID=cds.g7993.t1;Parent=g7993.t1;3_prime_partial=true #PROT g7993.t1 g7993 MLIREFRIPLPLAVEEYQVAQLWAVAEASKNETGGGEGIEVLVNEPYDDPALPGGKGQYTHKIYHLSSKVPKFVRILAPKGALEIHEKAWNAYPYCKTVLTNPDYMKENFHLTIETWHKPGVEDIENVHNLPEDLLKQREIVNIDIVNDPVERKDYVEEEDPSKFRSEKANRGPLDKEWKSKATPSMTAYKLVSVEFKWWGLQGKVESFIQK # PASA_UPDATE: g7994.t1, single gene model update, valid-1, status:[pasa:asmbl_9990,status:3], valid-1 NODE_919_length_15880_cov_38.693 . gene 2801 6785 . - . ID=g7994;Name=g7994.t1 NODE_919_length_15880_cov_38.693 . mRNA 2801 6785 . - . ID=g7994.t1;Parent=g7994;Name=g7994.t1 NODE_919_length_15880_cov_38.693 . five_prime_UTR 6649 6785 . - . ID=g7994.t1.utr5p1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 6512 6785 . - . ID=g7994.t1.exon1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 6512 6648 . - 0 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 6296 6359 . - . ID=g7994.t1.exon2;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 6296 6359 . - 1 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 5863 6057 . - . ID=g7994.t1.exon3;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 5863 6057 . - 0 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 5309 5488 . - . ID=g7994.t1.exon4;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 5309 5488 . - 0 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 4976 5124 . - . ID=g7994.t1.exon5;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 4976 5124 . - 0 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 4516 4758 . - . ID=g7994.t1.exon6;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 4516 4758 . - 1 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 4076 4239 . - . ID=g7994.t1.exon7;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 4076 4239 . - 1 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 3720 3858 . - . ID=g7994.t1.exon8;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 3720 3858 . - 2 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 3454 3583 . - . ID=g7994.t1.exon9;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 3454 3583 . - 1 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 3136 3254 . - . ID=g7994.t1.exon10;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 3136 3254 . - 0 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . exon 2801 2999 . - . ID=g7994.t1.exon11;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . CDS 2918 2999 . - 1 ID=cds.g7994.t1;Parent=g7994.t1 NODE_919_length_15880_cov_38.693 . three_prime_UTR 2801 2917 . - . ID=g7994.t1.utr3p1;Parent=g7994.t1 #PROT g7994.t1 g7994 MSSIQLLNPKAEVARQAAALQVNVSAAQGLQEILKTNLGPKGTMKMLVSGSLDIKITKDGNVLLHEMQIQHPTASLIARASTAQDEITGDGTTSNVLIIGELLKQADRYISEGLHPRVVNEGFEIAKKRALEILESVKQVVPIDRELLVNVARTSLRTKVHRELADVLTDCVVDAILTIRRDGKPIDLHMVEIMEMRHKSDLDTQLVKGLVLDHGARHPDMKKRAEDAYIFTCNVSLEYEKSEVNSGFFYKSAEERDRMVIAERAFTDERVRKIVEFKRKVCEGTKKGFVVINQKGIDPVSLDMLAKEGIVALRRAKRRNMERLILACGGSPMNSVDELTPDCLGHAGLVYEHTLGEEKFTFVEDVKNPESVTIVIKGPNSYTLTQIKDAIHDGLRAVKNAIEDGSVVPGAGAFEVALYRDLMKFKDEVKGRARLGVQAYADAILIIPKVLAQNAGHDAQDVIVACLEEHQKGVIAGVDIDTGLAMNPMDAGILDNYRVKRQIIHSATVIAGNLLLVDEMLRAGRSSLKQGQE* # ORIGINAL: g7995.t1 original gene structure, not modified by PASA NODE_919_length_15880_cov_38.693 AUGUSTUS gene 7465 8134 . - . ID=g7995;Name=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS mRNA 7465 8134 . - . ID=g7995.t1;Parent=g7995;Name=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS exon 8047 8134 . - . ID=g7995.t1.exon1;Parent=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS CDS 8047 8134 . - 0 ID=cds.g7995.t1;Parent=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS exon 7810 7865 . - . ID=g7995.t1.exon2;Parent=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS CDS 7810 7865 . - 2 ID=cds.g7995.t1;Parent=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS exon 7465 7608 . - . ID=g7995.t1.exon3;Parent=g7995.t1 NODE_919_length_15880_cov_38.693 AUGUSTUS CDS 7465 7608 . - 0 ID=cds.g7995.t1;Parent=g7995.t1 #PROT g7995.t1 g7995 MPQTPMKRAGAGNKPIKSRHEVNPGPKKGAKFIAPKKAKVVEAAKLKKKLESTIKTTIEQSLAAKVVFSSKPLSIIKTTSEDTGSATTGKATKKK* # PASA_UPDATE: g7996.t1, single gene model update, valid-1, status:[pasa:asmbl_9992,status:3], valid-1 NODE_919_length_15880_cov_38.693 . gene 8511 14159 . + . ID=g7996;Name=g7996.t1 NODE_919_length_15880_cov_38.693 . mRNA 8511 14159 . + . ID=g7996.t1;Parent=g7996;Name=g7996.t1 NODE_919_length_15880_cov_38.693 . five_prime_UTR 8511 8615 . + . ID=g7996.t1.utr5p1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . five_prime_UTR 8864 8949 . + . ID=g7996.t1.utr5p2;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 8511 8615 . + . ID=g7996.t1.exon1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 8864 9115 . + . ID=g7996.t1.exon2;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 8950 9115 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 9352 9524 . + . ID=g7996.t1.exon3;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 9352 9524 . + 2 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 9725 9947 . + . ID=g7996.t1.exon4;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 9725 9947 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 10327 10433 . + . ID=g7996.t1.exon5;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 10327 10433 . + 2 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 10810 10917 . + . ID=g7996.t1.exon6;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 10810 10917 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 11104 11226 . + . ID=g7996.t1.exon7;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 11104 11226 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 11535 11647 . + . ID=g7996.t1.exon8;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 11535 11647 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 11812 11915 . + . ID=g7996.t1.exon9;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 11812 11915 . + 1 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 12251 12330 . + . ID=g7996.t1.exon10;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 12251 12330 . + 2 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 12630 12708 . + . ID=g7996.t1.exon11;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 12630 12708 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 13146 13222 . + . ID=g7996.t1.exon12;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 13146 13222 . + 2 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 13457 13576 . + . ID=g7996.t1.exon13;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 13457 13576 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . exon 13775 14159 . + . ID=g7996.t1.exon14;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . CDS 13775 13921 . + 0 ID=cds.g7996.t1;Parent=g7996.t1 NODE_919_length_15880_cov_38.693 . three_prime_UTR 13922 14159 . + . ID=g7996.t1.utr3p1;Parent=g7996.t1 #PROT g7996.t1 g7996 MLCSRKCIFTASRIATATKNQRISRESQRLIREMGAALAMVASSAPRQPQSVRTYATQRVLTLESINQHLRNAEYAVRGEVPMRAEQIASELRDKKGSFPFDKIVRCNIGNPQELGQRPLTFFRQVCALLDCPDLLLKKNRETVLRLFPADAIDRAIKLQHEIPSTGAYSHSQGIKAIRDNVAKFIEERDGYPSSAEDIYLTNGASGGVQAVLQLIIQNERSGVMIPIPQYPLYSATLALFNGAPVPYYLNEDKGWGLTVDELQRSLNAARSAGIDTRALVIINPGNPTGGLLEADNIKDIIQFCHRERLVILADEVYQTNVYDPSLSFQSFKKVLKSMGPTYEDVELFSFHSISKGFVGECGKRGGFMEIVGVDQEVRDQIYKNASISLCPNIHGQVLVDLMVRPPQKGEASYELYNSEKNGILQSLKSRAETLVAAFNKLEGVTCNPAQGAMYTFPRIRLSKKAVEAAQAAGKRPDSFYSLALLNATGVCVVPGSGFNQVEGTWHFRSTFLPPEDQFPTFIDNIARFHKSFMDKYRD* # PASA_UPDATE: g9566.t1, single gene model update, valid-1, status:[pasa:asmbl_1285,status:12],[pasa:asmbl_1286,status:12], valid-1 NODE_134_length_36415_cov_38.5561 . gene 26331 30343 . + . ID=g9566;Name=g9566.t1 NODE_134_length_36415_cov_38.5561 . mRNA 26331 30343 . + . ID=g9566.t1;Parent=g9566;Name=g9566.t1 NODE_134_length_36415_cov_38.5561 . exon 26331 30343 . + . ID=g9566.t1.exon1;Parent=g9566.t1 NODE_134_length_36415_cov_38.5561 . CDS 26331 30314 . + 0 ID=cds.g9566.t1;Parent=g9566.t1 NODE_134_length_36415_cov_38.5561 . three_prime_UTR 30315 30343 . + . ID=g9566.t1.utr3p1;Parent=g9566.t1 #PROT g9566.t1 g9566 MAGAPPSPAPPGRMSLMGDMISAEDGKHLIRMSLPDNQGTVVCVEGTVTLIEALKPALARRRLTASDYMPCFFGTTQKAGWQTPVASLPSFHIVLATVPRHAYGSIRKKINWTDDGYSTTSSLPSSVDGSDAGSAGGSSRRGKGATSSRGTSHVAAAAIFEQMGESDAPTTVSTGTTPPSSGVAAAEPAVSGGADVPAQQQTPTAAAIDKRTRIVNELVATERAFVKSMDHLVESYYYPLKSTRGIILMEDVETIFCNVEELVEGNRQLLLRLEAVVSTWDSAATRVGHLFMSMAPFFSLYERYCNNHAAATAAVLRCQEKEPFLIFLKDVQRAAAASQARGDTASGVVHQSIDSLLLMPVQRVPRYILMLQELLKHTPDTHPDSSDIAAALEEVKRLAESLNENVRRSENEAYVTAIDRAFPGEPLALTTSPPLSSIPPAAPPSSTQLNQQMRSNRTMSDSAAAIVSAREAAQRVRQGRASTLYETTSPSSGLGMIQRSDSLGSASQLPGTVGAGAALGGVAGKLGRRFIMEGMLRVSGDEGAVRERYVFLLSDQLIIAKPRSASNVSVDKGAQFSVKARVALHEAWVIGADDFGDAESFMLGWAGRVTYFGVGSQAERDTWLEAVAGRIAAEKKADPSGKGPLTVYREESAAAQAGDAAIRGFSLSKGFYATTADDVNAVIKTALDKFGIVGDPAWYGLWEVYEPPNGYQRSRLLLPFECPLILRYALVAMGRHEHTRLVMREYDVAAHARSDLQRHLIKEQRPATGGGIMRSNSVATRSSAGTVRPLLVGTLNAGWTSAGSRSNIFSAEFAPPSRLSGGTLSSFARSKSKRQTTRITSRGSSTSIRGVDKLYSGRGADALVMCVPVVDVSSSPRPSVVAMAPPRLSDASTSSGLGSGSLSSLTPSEAMGEMKMTLAPPLRDMLQRLYDAGVGRKGLFKGSANGRLGMDLLDAYDAGLNVEIAEVPVSVVAAMLMELLSKVPETLVPAKLWASSALLLVAIAKGRATWGGGGGVYGGGGGASAGGSAAFSAVQPIVESLPEANRFVLGCIAGVLSRLCSPGSEGLSPEQSAERLAPTLVATPSPDAPEMVSPDAGSSRQLSTAELGLAASLLIECMIVDVVRLFGADKLDGPRRVSSQLSQQSSVRDVTDSPASSPLPVIVAQSSLTAPTTPTPGGSSRSVSPSPLGRGAARDRPVSPSPLSTGASSIPTATAASACPVSPSASRRPISSSALESPGVSASPMATAIARERSVSPAPLSFVASSTAGGVAECAADSCHAFPPVPAFTAFSPEPPEAERVHEDVLSHASHFVFDASLLGELRETSI* # ORIGINAL: g9567.t1 original gene structure, not modified by PASA NODE_134_length_36415_cov_38.5561 AUGUSTUS gene 30846 32993 . - . ID=g9567;Name=g9567.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS mRNA 30846 32993 . - . ID=g9567.t1;Parent=g9567;Name=g9567.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 30846 32993 . - . ID=g9567.t1.exon1;Parent=g9567.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 30846 32993 . - 0 ID=cds.g9567.t1;Parent=g9567.t1 #PROT g9567.t1 g9567 MRSFVYRLSDGGPEVVQRVFEERGWVEYDEDAHDGSAESEGLWNVWWRVSRFRMPEMRSVRPWQRLNHFPKTHEITRKDRLTRNLRKMRAVHGAVYDFVPTTFILPNDYTRFVAAYSEESGSGAEAVWICKPADLSRGRGIFLFRDINHLTYDSAAVVQKYVANPLLIGGYKFDLRIYVAVTSFYPLCIYLYDEGLTRFSTDKYSLETIGNVFSHLTNTSINKNAPGIASNKDAVGAGCKWSLEQLRAYFAARSVNDGPLWKRIEKIVVLTILALAPVVPQTSNCFELFGFDVLVDDALRPWLLEVNFSPALGADCDVDWQVKRPLINDIIDLLCLGEEDKVRVPGASESDDDGPGFRGGAGGGAHLGQGGRAPAVYSSSSGSSPMSRSATPSPPVARARKTKPAARRGKDGGRTPKIRTGVTSLAATDSREGSDGEVEEDIGARSGGDCDDHSNGAASPESTSGSDVVIGDAGVICTDDEDQVDGAHEGRVRRSGDAMSKAQDGRRTDKKKLRLPAITSPPSSSSSPPDSPEEDVHARTLRGDALPNKSTAGARDARPLLQKRGSVPSSMGRSTSHFRLGGVNDRQSQSHSDLFRRNAGAGGLGQHTHSLVALPSLHPSSRQQFQSQRGRVAGGLASGAPSHAHSRMPLQHQHGWVAMQFSPERERVGKFKRIFPYDDATARMCVPGKAVDVRAVVSEIKASGGRKGRTVASDQ* # ORIGINAL: g9564.t1 original gene structure, not modified by PASA NODE_134_length_36415_cov_38.5561 AUGUSTUS gene 20084 21905 . - . ID=g9564;Name=g9564.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS mRNA 20084 21905 . - . ID=g9564.t1;Parent=g9564;Name=g9564.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 21254 21905 . - . ID=g9564.t1.exon1;Parent=g9564.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 21254 21905 . - 0 ID=cds.g9564.t1;Parent=g9564.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 20084 20892 . - . ID=g9564.t1.exon2;Parent=g9564.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 20084 20892 . - 2 ID=cds.g9564.t1;Parent=g9564.t1 #PROT g9564.t1 g9564 MPEWMDALLGNQFFSAGFGLVGVGTGLALLRTGLKHGTTLARRYLLVTLEIASKDRSYEWVLQWITARGRRSTQHLSLETNFQQHESGQITTRYSFVPSPGNHWIPYGRAWIHVNRQREKNVIDLRSGTPWETVTLTTLGRNPAIFQGILDEAHRLAMSQQEGRTVIYTSYGTEWRPFGQPRRRRPIDSVLLQEGVAERITGDVNEFLNSSQWYIDRGIPYRRGYLLHGPPGSGKSSFITALAGKIMYNICILSLSERGLTDDRLNHLMCVAPPRSIILLEDIDAAFVKRDAKTAEYSVTFSGLLNTLDGVGSTEERVVFMTTNHVDRLDPALIRPGRVDMIVELGHATTKQIRGMFAKFYPGLTGDDADAADRFAVSLEGSSISMAQLQGFLMFFKNDPSAALRESYRLWPRDEQDQARARLAAVMESAQRAYASHSEVGRISDIAATHPKPHTKTHEEHGDKAHVQKETPLSRTDSAANQPADR* # PASA_UPDATE: g9561.t1, single gene model update, valid-1, status:[pasa:asmbl_1281,status:12],[pasa:asmbl_1283,status:12], valid-1 NODE_134_length_36415_cov_38.5561 . gene 100 5318 . + . ID=g9561;Name=g9561.t1 NODE_134_length_36415_cov_38.5561 . mRNA 100 5318 . + . ID=g9561.t1;Parent=g9561;Name=g9561.t1 NODE_134_length_36415_cov_38.5561 . five_prime_UTR 100 100 . + . ID=g9561.t1.utr5p1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . exon 100 1006 . + . ID=g9561.t1.exon1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 101 1006 . + 0 ID=cds.g9561.t1;Parent=g9561.t1;5_prime_partial=true NODE_134_length_36415_cov_38.5561 . exon 1856 2113 . + . ID=g9561.t1.exon2;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 1856 2113 . + 0 ID=cds.g9561.t1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . exon 2332 3223 . + . ID=g9561.t1.exon3;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 2332 3223 . + 0 ID=cds.g9561.t1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . exon 3622 3966 . + . ID=g9561.t1.exon4;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 3622 3966 . + 2 ID=cds.g9561.t1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . exon 4315 4452 . + . ID=g9561.t1.exon5;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 4315 4452 . + 2 ID=cds.g9561.t1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . exon 4817 5318 . + . ID=g9561.t1.exon6;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . CDS 4817 5148 . + 2 ID=cds.g9561.t1;Parent=g9561.t1 NODE_134_length_36415_cov_38.5561 . three_prime_UTR 5149 5318 . + . ID=g9561.t1.utr3p1;Parent=g9561.t1 #PROT g9561.t1 g9561 CPTDSPGSTARAVRELFGEMRRRSLRALGFAKTLSRDLSISADFHIRDLRATFGKLSASGLVAVRLVSSMSSHTSGSNFCALASPPPTPVGGGGVVLLASGDMRDDSFAGVLPLLVQCSGRDAAGPDSGGYLVLAASTLGEGETGLAYGRPLQRFASAAQPPGVTFSAEHDDYAIPAAWHAPWQGGVRGARSDLFDAFGDAEHSGGGSDGSCEEHSDGGGAGAGMPGRWARGRVSDGSDGAAEDDVDPVVSPSPRSSLHSRDGDRSPLCALAAEALRGVTWPGDSVDLRKSADAAIGLADVRVKGLKLVCRNASELQHHRRALERLLGDAAVSTGEQTSPRQSVASQIESMRRASLEVAAGIAGAIKRVADSLRTVEIQDNVARFCYESVQHCFNFAFEYFKEVHRFVSARERVDLAQKAVDLSREWMAFALDCVDVLGGGGGTRWGTHGLQFIVASCTPQSTRHLTDVEFQQLQISVEDCADRLLGFWHYESETDPSTCATAETLSPEVLSALASGTSTPVLHGPGQASRGSATVAGLLSSLPRHVHAAHTQAAEKLMSDGERKRNVDLEGDFMDRQRVQRLRRHKSWPHLDIATSAGGGGGGGGGGVVSPVRTDSISRLRRTDGRRKSPLVAEAVAQLEKDRDERLLKASRVGRVVQRPRTSATSSVDWSYRPKILWQKGRLLGSGTHGHVHLCVHLETGHDLAVKQISLQSKSVEDRDKIISLLHAEMDLVSGHQHPNLVRYYGVDVRQDAVFVLMEFCPLGSLGQLLAAGPLEEPVVRSYTGQILSAVDYLHKKGICHNDIKGSNILLDAKGVIKLCDFSDCVRTSQMSGAQSRSLVQSAPKGTVPFWAPEVARGEAVKPELQEKADIWAVGCVVIELATGRPPWAEFGSDKFTILYQIGKGSQPQLPAALSKEGQNFVSRCLAQDPQTRPSAADLLHHPFVKVPAEQSVQQ* # ORIGINAL: g9562.t1 original gene structure, not modified by PASA NODE_134_length_36415_cov_38.5561 AUGUSTUS gene 11548 13810 . - . ID=g9562;Name=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS mRNA 11548 13810 . - . ID=g9562.t1;Parent=g9562;Name=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 13699 13810 . - . ID=g9562.t1.exon1;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 13699 13810 . - 0 ID=cds.g9562.t1;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 13386 13606 . - . ID=g9562.t1.exon2;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 13386 13606 . - 2 ID=cds.g9562.t1;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 12848 12877 . - . ID=g9562.t1.exon3;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 12848 12877 . - 0 ID=cds.g9562.t1;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 11548 12117 . - . ID=g9562.t1.exon4;Parent=g9562.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 11548 12117 . - 0 ID=cds.g9562.t1;Parent=g9562.t1 #PROT g9562.t1 g9562 MKPHGFTAITAAYVVLALAGCAAFVGRSAAGDVAVTNGTIWFNSSIDGASVQSLLKSIVNLERLLTPALSKIQQFESDIAAAKANISALSNLTASQALTIQGQATLITSLQAFRTKAMPQEFITYSHFVPLVPTKDIPPCKDVPSDPSTFAFTSNLSYFPLSADGSPCYIDLLETQSDPFFRVPRSGFTPDYFNLHLNAEVGSLPDTISVSTLVGVEFMPGSRQFCALGAKNEPIYTQPNALRPRGAASGRLTFQVSGRNWGDNYVDHNRIPFDLMFTEYNAGYIRLINLGPHKVELRGIGISAVALPFK* # ORIGINAL: g9563.t1 original gene structure, not modified by PASA NODE_134_length_36415_cov_38.5561 AUGUSTUS gene 15143 19436 . + . ID=g9563;Name=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS mRNA 15143 19436 . + . ID=g9563.t1;Parent=g9563;Name=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 15143 15302 . + . ID=g9563.t1.exon1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 15143 15302 . + 0 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 15641 15801 . + . ID=g9563.t1.exon2;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 15641 15801 . + 2 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 16197 16359 . + . ID=g9563.t1.exon3;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 16197 16359 . + 0 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 16560 16668 . + . ID=g9563.t1.exon4;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 16560 16668 . + 2 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 16888 17153 . + . ID=g9563.t1.exon5;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 16888 17153 . + 1 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 17434 17603 . + . ID=g9563.t1.exon6;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 17434 17603 . + 2 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 17906 18001 . + . ID=g9563.t1.exon7;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 17906 18001 . + 0 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 18334 18482 . + . ID=g9563.t1.exon8;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 18334 18482 . + 0 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 19049 19152 . + . ID=g9563.t1.exon9;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 19049 19152 . + 1 ID=cds.g9563.t1;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS exon 19387 19436 . + . ID=g9563.t1.exon10;Parent=g9563.t1 NODE_134_length_36415_cov_38.5561 AUGUSTUS CDS 19387 19436 . + 2 ID=cds.g9563.t1;Parent=g9563.t1 #PROT g9563.t1 g9563 MGTLAEFQVVLLAGGTGSRINQLTEDVPKPLLPIANRPMVWYSLRFLELAGFADVIVIVRKENGEGSKNEVVDYLNSYEGKIKRDVHVIEGDKGTADALREIREKIKTDFIVMSSDLVTDVDLQHLADLHRINDATMTALMSVRSPEAATDATKKKSTADSGLKDYVGLDDTNKRLLFFAPQADVEEALVIRKSVLRRYPQLTITTNLADAHLYIFKNWVLDFLVDKRALSTVKGELVPYLVRKQFAKRSAAGHVVGSGVGESGDATPGHDITTASVDGNPRDAKIDLASYALMDELDSLVLEMSSTPRVQNGGINCFVYLLPSDRYCARANTLASYAEINKQIPRELAFPAGTEKHASGAEYIHPTAKIDPKTQIGNDCVIGEQVRIGERCSVKRSVIGKHCQIGADVKIANSVIMDYVTIGDGSNISGSIVCPHTLIEDKCVVSNCQIGRKYRLTAGSKIANECIRDDRDYQI* # PASA_UPDATE: g9565.t1, single gene model update, valid-1, status:[pasa:asmbl_1282,status:3], valid-1 NODE_134_length_36415_cov_38.5561 . gene 22269 25029 . + . ID=g9565;Name=g9565.t1 NODE_134_length_36415_cov_38.5561 . mRNA 22269 25029 . + . ID=g9565.t1;Parent=g9565;Name=g9565.t1 NODE_134_length_36415_cov_38.5561 . five_prime_UTR 22269 22384 . + . ID=g9565.t1.utr5p1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 22269 22387 . + . ID=g9565.t1.exon1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 22385 22387 . + 0 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 22535 22577 . + . ID=g9565.t1.exon2;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 22535 22577 . + 0 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 22736 22898 . + . ID=g9565.t1.exon3;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 22736 22898 . + 2 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 23234 23311 . + . ID=g9565.t1.exon4;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 23234 23311 . + 1 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 23693 23781 . + . ID=g9565.t1.exon5;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 23693 23781 . + 1 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 24010 24173 . + . ID=g9565.t1.exon6;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 24010 24173 . + 2 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 24348 24435 . + . ID=g9565.t1.exon7;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 24348 24435 . + 0 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . exon 24822 25029 . + . ID=g9565.t1.exon8;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . CDS 24822 24946 . + 2 ID=cds.g9565.t1;Parent=g9565.t1 NODE_134_length_36415_cov_38.5561 . three_prime_UTR 24947 25029 . + . ID=g9565.t1.utr3p1;Parent=g9565.t1 #PROT g9565.t1 g9565 MSHRYDSRTTIFSPEGRLYQVEYALEAISHAGTCLGVLASDGIVLAAEKRITSRLLEQDHTMEKIYKLNDDMACAVAGITADANTLINWVRLSAQRYQFQYQESIPCEQLVQNVCDLKQGYTQYGGLRPYGVSFLYAGWDRHFGFQLYQSDPSGNYGGWMATCIGANSQSAQSVLKSDYKEGIALKEAKVLAVKVLSKTMDSTTLTSEKLEFAVVHRENNKTHFTILKPAEIDALLKEANVGKDSEEKKD* # PASA_UPDATE: g9568.t1, single gene model update, valid-1, status:[pasa:asmbl_1287,status:12], valid-1 NODE_134_length_36415_cov_38.5561 . gene 35694 36415 . - . ID=g9568;Name=g9568.t1 NODE_134_length_36415_cov_38.5561 . mRNA 35694 36415 . - . ID=g9568.t1;Parent=g9568;Name=g9568.t1 NODE_134_length_36415_cov_38.5561 . exon 35694 36415 . - . ID=g9568.t1.exon1;Parent=g9568.t1 NODE_134_length_36415_cov_38.5561 . CDS 36083 36415 . - 0 ID=cds.g9568.t1;Parent=g9568.t1;5_prime_partial=true NODE_134_length_36415_cov_38.5561 . three_prime_UTR 35694 36082 . - . ID=g9568.t1.utr3p1;Parent=g9568.t1 #PROT g9568.t1 g9568 RGFATTTTAAATAATTAATTAATTAATTATACAVVDGNVGVCTLPDGSQRASSCRCRIRAAAAPATTASAGHGHGRSNDDGANVCRHAHATTDALAALELNANLICLSPA* # PASA_UPDATE: g14329.t1, single gene model update, valid-1, status:[pasa:asmbl_7743,status:3], valid-1 NODE_494_length_22500_cov_40.4099 . gene 17096 19922 . - . ID=g14329;Name=g14329.t1 NODE_494_length_22500_cov_40.4099 . mRNA 17096 19922 . - . ID=g14329.t1;Parent=g14329;Name=g14329.t1 NODE_494_length_22500_cov_40.4099 . five_prime_UTR 19862 19922 . - . ID=g14329.t1.utr5p1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . five_prime_UTR 19664 19762 . - . ID=g14329.t1.utr5p2;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . exon 19862 19922 . - . ID=g14329.t1.exon1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . exon 18791 19762 . - . ID=g14329.t1.exon2;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . CDS 18791 19663 . - 0 ID=cds.g14329.t1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . exon 18150 18562 . - . ID=g14329.t1.exon3;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . CDS 18150 18562 . - 0 ID=cds.g14329.t1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . exon 17723 17861 . - . ID=g14329.t1.exon4;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . CDS 17723 17861 . - 1 ID=cds.g14329.t1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . exon 17096 17455 . - . ID=g14329.t1.exon5;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . CDS 17249 17455 . - 0 ID=cds.g14329.t1;Parent=g14329.t1 NODE_494_length_22500_cov_40.4099 . three_prime_UTR 17096 17248 . - . ID=g14329.t1.utr3p1;Parent=g14329.t1 #PROT g14329.t1 g14329 MAASKTKAHSTAGLLDPFRALPIESAACGWATAEREYDYWVPEADVVGRIPTDLIGTFFRNGPGISEVGDSKLQHPIDGDGMVCALTFTNGRVHFKSRFVQTSSRVAEQKAGGKLLYRGQMGTNPNTLRQNVSTLASAIITGTPKGLQFRDPSNTNAFLWGNKLLTCYETRLPQCLDPRTLDTLGREDIDGTLREFGAFAAHYRMDSIRDRLVCISLKAAITPNLSTLGIMEYDRSWKLVRKQVHRIPGLDYAHDFAMTENYYIFHITPFVKTTKMLALAIAGGISSPGESMRYYPDRPSRMVAIPRDPARQDAYVAVDCDPCHIFHFATAEERDNGRTIEFTAVTLGKSFNMEFQNKVWLSNAADAPGKLCKFVLDLDAKKCTRTKIDDASCEFPSVHPYRHGMPCRYVWMMASDRKGANVPYRDIVRSDVKDTAHRQVWHSHGTVGEPVFIPRLGYPASIDGGREDDGWIIVQVYIPETHRTEYVILDAARVHDGPVARIRLKHHIPYGFHGTFSPEVFVMDDNAGPEGVRPAAARMQSRL* # PASA_UPDATE: g14325.t1, single gene model update, valid-1, status:[pasa:asmbl_7742,status:12], valid-1 NODE_494_length_22500_cov_40.4099 . gene 3532 5734 . - . ID=g14325;Name=g14325.t1 NODE_494_length_22500_cov_40.4099 . mRNA 3532 5734 . - . ID=g14325.t1;Parent=g14325;Name=g14325.t1 NODE_494_length_22500_cov_40.4099 . five_prime_UTR 5723 5734 . - . ID=g14325.t1.utr5p1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . exon 5458 5734 . - . ID=g14325.t1.exon1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . CDS 5458 5722 . - 0 ID=cds.g14325.t1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . exon 4722 5219 . - . ID=g14325.t1.exon2;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . CDS 4722 5219 . - 2 ID=cds.g14325.t1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . exon 4496 4548 . - . ID=g14325.t1.exon3;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . CDS 4496 4548 . - 2 ID=cds.g14325.t1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . exon 4119 4228 . - . ID=g14325.t1.exon4;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . CDS 4119 4228 . - 0 ID=cds.g14325.t1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . exon 3532 3822 . - . ID=g14325.t1.exon5;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . CDS 3639 3822 . - 1 ID=cds.g14325.t1;Parent=g14325.t1 NODE_494_length_22500_cov_40.4099 . three_prime_UTR 3532 3638 . - . ID=g14325.t1.utr3p1;Parent=g14325.t1 #PROT g14325.t1 g14325 MPRSASRSRSRSPRRSRGEDERGGRRDGGEVRRSRWHSRSRSRSRSPRRSPPRRDAHRRDERRGDDRREDRRDDRRDERRGDARDDRKGREDDDRRHSSSNAASNESRDRQHTTSAQQDANTVRPAHSDNGGGRGGSGRGGGGGSRLDVRPGESRGEAIARRRERMGADEDDSKYEFGKPAANPTQDGSGDGDVVDEEAAPAPPKIKPNYETTGKLAEATNTVKGVVLKYNEPTEARVPKLRWRLYPFKDGKPLDALHVHRQSAYLLGRERVVADIPLDHPSCSKQHAVLQFRQVQVDKEDGSIVRKTKPYILDLESANGTYLNGDRIEAKRYYELLEKDVLKFGFSSREYVVLNERSVEDPEEDDEVA* # PASA_UPDATE: g14328.t2, single gene model update, valid-1, status:[pasa:asmbl_7739,status:3], valid-1 # PASA_UPDATE: g14328.t1, single gene model update, valid-1, status:[pasa:asmbl_7740,status:12],[pasa:asmbl_7746,status:12], valid-1 NODE_494_length_22500_cov_40.4099 . gene 13007 16611 . + . ID=g14328;Name=g14328.t1 NODE_494_length_22500_cov_40.4099 . mRNA 13007 16611 . + . ID=g14328.t2;Parent=g14328;Name=g14328.t1 NODE_494_length_22500_cov_40.4099 . five_prime_UTR 13007 13133 . + . ID=g14328.t2.utr5p1;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 13007 13242 . + . ID=g14328.t2.exon1;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 13134 13242 . + 0 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 13662 13795 . + . ID=g14328.t2.exon2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 13662 13795 . + 2 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 14317 14402 . + . ID=g14328.t2.exon3;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 14317 14402 . + 0 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 14753 14915 . + . ID=g14328.t2.exon4;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 14753 14915 . + 1 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 15386 15508 . + . ID=g14328.t2.exon5;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 15386 15508 . + 0 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . exon 15866 16611 . + . ID=g14328.t2.exon6;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . CDS 15866 16519 . + 0 ID=cds.g14328.t2;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . three_prime_UTR 16520 16611 . + . ID=g14328.t2.utr3p1;Parent=g14328.t2 NODE_494_length_22500_cov_40.4099 . mRNA 13009 16611 . + . ID=g14328.t1;Parent=g14328;Name=g14328.t1 NODE_494_length_22500_cov_40.4099 . five_prime_UTR 13009 13133 . + . ID=g14328.t1.utr5p1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 13009 13242 . + . ID=g14328.t1.exon1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 13134 13242 . + 0 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 13662 13795 . + . ID=g14328.t1.exon2;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 13662 13795 . + 2 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 14317 14402 . + . ID=g14328.t1.exon3;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 14317 14402 . + 0 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 14753 14915 . + . ID=g14328.t1.exon4;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 14753 14915 . + 1 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 15389 15508 . + . ID=g14328.t1.exon5;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 15389 15508 . + 0 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . exon 15866 16611 . + . ID=g14328.t1.exon6;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . CDS 15866 16519 . + 0 ID=cds.g14328.t1;Parent=g14328.t1 NODE_494_length_22500_cov_40.4099 . three_prime_UTR 16520 16611 . + . ID=g14328.t1.utr3p1;Parent=g14328.t1 #PROT g14328.t2 g14328 MASEREKKKLNEHHNQILAGMLNEEENKYCADCQTKGPRWASWNLGCFLCIKCAGIHRNLGVHISRVKSVTLDSWTPEQIESIQKWGNAKVASLYERNIPDGYRRPQNDIELESFIRAKYERKQFIARDGDVQSAQHGSHKAHHPPKHRASDVAMEPKNHRIDDQRAKGAVPKPVEAPKASPVRPPPPSTNVHPHAPVHAQAPAAASLAAHVDLLSLGETSPAAQRHAAPAAVAPVQSKPSSGLGDLDFLAGGSAAPASGGYGAAPTPSTSSDFGDLFGAPAKQQVSKDSILSLYAQPTPTPGSQFRPQMQQQPQPGMGAYGAYPGGIQGGQYGAAPSPYGAAPSPYGAAPSPYGAAPSPYGAAPSPFAQQSPFAQPGLYGMPQAQQQPQMYGAYPNTMMMGGARPAAPAPVGATFDSNLWK* #PROT g14328.t1 g14328 MASEREKKKLNEHHNQILAGMLNEEENKYCADCQTKGPRWASWNLGCFLCIKCAGIHRNLGVHISRVKSVTLDSWTPEQIESIQKWGNAKVASLYERNIPDGYRRPQNDIELESFIRAKYERKQFIARDGDVQSAQHGSHKAHHPPKHRASDVAMEPKNHRIDDRAKGAVPKPVEAPKASPVRPPPPSTNVHPHAPVHAQAPAAASLAAHVDLLSLGETSPAAQRHAAPAAVAPVQSKPSSGLGDLDFLAGGSAAPASGGYGAAPTPSTSSDFGDLFGAPAKQQVSKDSILSLYAQPTPTPGSQFRPQMQQQPQPGMGAYGAYPGGIQGGQYGAAPSPYGAAPSPYGAAPSPYGAAPSPYGAAPSPFAQQSPFAQPGLYGMPQAQQQPQMYGAYPNTMMMGGARPAAPAPVGATFDSNLWK* # ORIGINAL: g14324.t1 original gene structure, not modified by PASA NODE_494_length_22500_cov_40.4099 AUGUSTUS gene 157 2771 . - . ID=g14324;Name=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS mRNA 157 2771 . - . ID=g14324.t1;Parent=g14324;Name=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 2738 2771 . - . ID=g14324.t1.exon1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 2738 2771 . - 0 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 2243 2355 . - . ID=g14324.t1.exon2;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 2243 2355 . - 2 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 1760 1877 . - . ID=g14324.t1.exon3;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 1760 1877 . - 0 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 1422 1496 . - . ID=g14324.t1.exon4;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 1422 1496 . - 2 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 987 1125 . - . ID=g14324.t1.exon5;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 987 1125 . - 2 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 509 650 . - . ID=g14324.t1.exon6;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 509 650 . - 1 ID=cds.g14324.t1;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 157 249 . - . ID=g14324.t1.exon7;Parent=g14324.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 157 249 . - 0 ID=cds.g14324.t1;Parent=g14324.t1 #PROT g14324.t1 g14324 MSKRNVAYFYDNEVGNYYYGQGHPMKPHRMRMTHSLLLNYGLYKKMEMFRPHRATFEDMTKFHSDDYINFLKRINPENQFEHQKQMARFNVGEDCPVFDGLYEFCQISAGGSVGGAIKLNKQQADIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKTHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDVGAGKGKHYALNFPLRDGIDDNSYQNAFRP # ORIGINAL: g14327.t2 original gene structure, not modified by PASA # ORIGINAL: g14327.t1 original gene structure, not modified by PASA NODE_494_length_22500_cov_40.4099 AUGUSTUS gene 9328 12260 . - . ID=g14327;Name=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS mRNA 11405 12260 . - . ID=g14327.t2;Parent=g14327;Name=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 12178 12260 . - . ID=g14327.t2.exon1;Parent=g14327.t2 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 12178 12260 . - 0 ID=cds.g14327.t2;Parent=g14327.t2 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 11405 12041 . - . ID=g14327.t2.exon2;Parent=g14327.t2 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 11405 12041 . - 1 ID=cds.g14327.t2;Parent=g14327.t2 NODE_494_length_22500_cov_40.4099 AUGUSTUS mRNA 9328 12260 . - . ID=g14327.t1;Parent=g14327;Name=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 12178 12260 . - . ID=g14327.t1.exon1;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 12178 12260 . - 0 ID=cds.g14327.t1;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 11436 12041 . - . ID=g14327.t1.exon2;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 11436 12041 . - 1 ID=cds.g14327.t1;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 10979 11100 . - . ID=g14327.t1.exon3;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 10979 11100 . - 1 ID=cds.g14327.t1;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 10496 10646 . - . ID=g14327.t1.exon4;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 10496 10646 . - 2 ID=cds.g14327.t1;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 9328 9778 . - . ID=g14327.t1.exon5;Parent=g14327.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 9328 9778 . - 1 ID=cds.g14327.t1;Parent=g14327.t1 #PROT g14327.t2 g14327 MSPMITEPHLREFFGHVGSVVQVKVLPIDLAAGGVRTAFVEFVEEADASLSLYLTNTIFIDRPFIISAAPDGIPANAETLVQAPVNPHSLLPSPMHPPMQGAAPPQGPGSLLVPVVPGTVAVLGPNGMQRAPQFMPPAQTMMNLPPLGTNVDPSKIDEIRRTVYVGNLPSSVSPDQLVQFFSSAGPILFCRLAGEETQSTRFAFVEFDSIQTALTAISMNGMLLEGRPVKWVVVVLFAM* #PROT g14327.t1 g14327 MSPMITEPHLREFFGHVGSVVQVKVLPIDLAAGGVRTAFVEFVEEADASLSLYLTNTIFIDRPFIISAAPDGIPANAETLVQAPVNPHSLLPSPMHPPMQGAAPPQGPGSLLVPVVPGTVAVLGPNGMQRAPQFMPPAQTMMNLPPLGTNVDPSKIDEIRRTVYVGNLPSSVSPDQLVQFFSSAGPILFCRLAGEETQSTRFAFVEFDSIQTALTAISMNGMLLEGRPVKVNHSKNPIVKATPRIPTAQEIEETMRRVREAGQKIASKANEDAPAAQGDGASGANPAHPQQAQPTGERKDSAVSRPRSPSPARDRRRSRSRRRRERSIERRRERDSRDTRDTRDTRDSRDRRDRDRDRERERERDRERGSSSRDKERESRDKDKDRDRKDRGRSDRDRERDRDRRDKKDRRERSGEREKKKDDAEEEVRADGDVPMDAAPGHSEAKGDANIIGDASEPKAAGEGPEPMEM* # ORIGINAL: g14326.t1 original gene structure, not modified by PASA NODE_494_length_22500_cov_40.4099 AUGUSTUS gene 6150 8036 . - . ID=g14326;Name=g14326.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS mRNA 6150 8036 . - . ID=g14326.t1;Parent=g14326;Name=g14326.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS exon 6150 8036 . - . ID=g14326.t1.exon1;Parent=g14326.t1 NODE_494_length_22500_cov_40.4099 AUGUSTUS CDS 6150 8036 . - 0 ID=cds.g14326.t1;Parent=g14326.t1 #PROT g14326.t1 g14326 MAPRYSIDITNAEGSAGRRRSSAVAGRTGTRASLTLHAAEFGTVDLGALPPFPMDCPNPKLHPDECGCNGTPEDGDPERRGSRMTSVIIGGIPLAAFFILVVEVCERFCFYGATTVFTTYMDGMLEMSSSTINAISNAFNFWAYLTALLGGYVADTYLGKFKTILTFAFIYLSGMILLTLSASPFAYGDFPYNASGGWAIPGFAVAIFLIGLGTGAIKSCVSPMVADQLRNATDAAIERVFRLFYLAINLGSFVGILVTPILHHFGPTKYVPGDNGANNVNGTDFYLSFLVPTVVMAIGIILFIVGRPWYIDRPPTGSMLSVFKDAAVIAIRNRRGQIHNKKHWLDWAKGTEEVPDQLIEDFKTTLKACRVFFFFIIYMLLYNQMQNTFVLQGGWMDRPKWLTTDQLQVIDPLMLIILIPLFDIFFFPFLRKKGHPMGPILRMTVGFVIAGVGFIYVGILQFYIAKNGTWDSDGNYTTKPGADFLSIWLQIPPYVFIAVSEIFASITGLEFAYSQAPASMKSTVMALYLLSIAASSLLGLAIAPAMIPENMTAVFLAMSGAMLTFAVLFWFIFRNHKIVSGETLQTLPTSQTQPGTIKLSSTLPLAGAMSGKMTESGVELETPVATSV* # PASA_UPDATE: g4059.t1, single gene model update, valid-1, status:[pasa:asmbl_5882,status:12], valid-1 NODE_3312_length_3767_cov_82.1471 . gene 255 3441 . - . ID=g4059;Name=g4059.t1 NODE_3312_length_3767_cov_82.1471 . mRNA 255 3441 . - . ID=g4059.t1;Parent=g4059;Name=g4059.t1 NODE_3312_length_3767_cov_82.1471 . five_prime_UTR 3355 3441 . - . ID=g4059.t1.utr5p1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . five_prime_UTR 3082 3121 . - . ID=g4059.t1.utr5p2;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 3355 3441 . - . ID=g4059.t1.exon1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 2767 3121 . - . ID=g4059.t1.exon2;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 2767 3081 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 2237 2401 . - . ID=g4059.t1.exon3;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 2237 2401 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 1782 1960 . - . ID=g4059.t1.exon4;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 1782 1960 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 1396 1489 . - . ID=g4059.t1.exon5;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 1396 1489 . - 1 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 1146 1229 . - . ID=g4059.t1.exon6;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 1146 1229 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 747 887 . - . ID=g4059.t1.exon7;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 747 887 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . exon 255 438 . - . ID=g4059.t1.exon8;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . CDS 334 438 . - 0 ID=cds.g4059.t1;Parent=g4059.t1 NODE_3312_length_3767_cov_82.1471 . three_prime_UTR 255 333 . - . ID=g4059.t1.utr3p1;Parent=g4059.t1 #PROT g4059.t1 g4059 MGVHFGEPECVVDPTHGRMDYFGPMVNKSARIGGAAHGGQVIVSKVVLESVESLLPPDRVKIIPLGAFSLKGIESQENLYSVVALALNEREFGPPKCEGPTDSEQTHMEKRMKQLVDENALLNNHLKDLEDQLRRSRELAVGLLCRVRPQAKNEMPKGEQLRLDTALSQIERFLEDATKFKSELDNVSKQSTAMAKEIETLRAAPNALSPVRTKGGTSNVDLENQLSASNAETDRLRAKVRDMAQSLKEAEVSFKKAVESTKNSEKNKENVKDFVDKIQADADKTRNELTQTQKALETQSREKARLIEQTEQLGKDVESLKQSHEKERQYLTKKVDAVMTQMDAIRAFLLKTEGIRDGTP* # ORIGINAL: g5714.t1 original gene structure, not modified by PASA NODE_2441_length_6263_cov_21.7906 AUGUSTUS gene 1 934 . - . ID=g5714;Name=g5714.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS mRNA 1 934 . - . ID=g5714.t1;Parent=g5714;Name=g5714.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS exon 756 934 . - . ID=g5714.t1.exon1;Parent=g5714.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS CDS 756 934 . - 0 ID=cds.g5714.t1;Parent=g5714.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS exon 1 548 . - . ID=g5714.t1.exon2;Parent=g5714.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS CDS 1 548 . - 1 ID=cds.g5714.t1;Parent=g5714.t1 #PROT g5714.t1 g5714 MANFVIGLDFGTARSGHAFAVRRRVATPAEQQIRIKYDWPGSCESYAKTLTQLLYSVSGSGVVKLEAWGHPAGERYFREGKQQGHNLVLIKDFKMRLFQGTRGGDESASGRRSTAFGAPVAHSDAEGKRIMNDTGIGSLVVFKRIQEEALVCEQESGDPEHRTVPPGERSGSGSANDMKLRFPTPSGRIVYIEVLDLIADMLRVLKEDVLQIVRSADAGVRESEIKWVITVPAIWDARAKDF # ORIGINAL: g5716.t1 original gene structure, not modified by PASA NODE_2441_length_6263_cov_21.7906 AUGUSTUS gene 4455 6239 . - . ID=g5716;Name=g5716.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS mRNA 4455 6239 . - . ID=g5716.t1;Parent=g5716;Name=g5716.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS exon 4455 6239 . - . ID=g5716.t1.exon1;Parent=g5716.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS CDS 4455 6239 . - 0 ID=cds.g5716.t1;Parent=g5716.t1 #PROT g5716.t1 g5716 MVVVVPTDPGAAVVGGAVRYGLAPERILSHIMRYTYGVAVSVPFVEGQHDIWRRRDLDDDQHTVYCDDCFSPVVHAGQSVAVNDVMSQSYSVTQPDASTVEVQFYATQNANAMYINDPGVTRLCTLEVPMTGHGMNRGVVVHMLFGDAEIRVRVVDKSDRSVERHCKLAYLDSSDLEDEEGRETHSHNSHDRNNSADCYTGGARSSRFPVVPAASTESINRQGYSRHQRVADAAFSTHDRPTCNEHKEHITSGVHQHAAIDNNQAAACYSREEVVVGPSSYNAPPQLPRRNASQPSVHQLYDSGHEHGTAGELHGALVPHTPFATPRYYVCEDDWRTVRHDEATSHASQSHQVPASGASRQSLHATAVPVVVFQPELYATAQQRHSSGTLVRHQSLTSFPSDSSLAGQATGVRCDGSRDRWGASGLVGQCSTPTDSMQLPPTYDEVECALNRHPLGDHGQSHAKRNAASSSDKWIEFPQSESSPSRVHVATGDKPLQDNVQHTASTLEDEQCSPSHTQPPPSYEAAVASPLEYEGPSSTGPQMPEHQPQYHTLNVDIYDSDPTFEHEAATAPPTAVAQSHGQVAQPEPLAQPHP* # ORIGINAL: g5715.t1 original gene structure, not modified by PASA NODE_2441_length_6263_cov_21.7906 AUGUSTUS gene 2105 3448 . - . ID=g5715;Name=g5715.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS mRNA 2105 3448 . - . ID=g5715.t1;Parent=g5715;Name=g5715.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS exon 2105 3448 . - . ID=g5715.t1.exon1;Parent=g5715.t1 NODE_2441_length_6263_cov_21.7906 AUGUSTUS CDS 2105 3448 . - 0 ID=cds.g5715.t1;Parent=g5715.t1 #PROT g5715.t1 g5715 MAHDSYMWQQQLYGGQFTETERGRISTWRTDSIIANQHHTLCENESRPVTGSLHVRPLRDEFEAPPPSTVSEVFGGQSSRRVYPNSKGSRNLQKLITKIQSGTPVNTEVLFALDCAVEIAASLARLELKHHQLIDEHNALRERCLRAAPGTTELSVRPELLEVRLKEYFLFVRNCAQRLAREIFPGPDRRQVLKKCQAALNGAVFRELYNLVYARRQSLEAKVCSQLVESVTVTSSRAEQSANPNEGKEDCRNVSAPRGQKKKNKENGKSASARSYTSSTQRTSRITAPNNLSVQDASPQSTPPEVRLSDGQRAAVAAVVKGWEAEARMSLEQMIANDAEKILYKTVDSGLITSPQHRLSRECMESVGGVARRAASIIADLVYGPHAEFKPEFAAADHVINQSWYRCDEDIAELSPSTRITVVPAFVSVEGTNLLFQGLVGTVTIPP* # ORIGINAL: g7524.t1 original gene structure, not modified by PASA NODE_2730_length_5302_cov_38.9564 AUGUSTUS gene 179 5172 . + . ID=g7524;Name=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS mRNA 179 5172 . + . ID=g7524.t1;Parent=g7524;Name=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 179 217 . + . ID=g7524.t1.exon1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 179 217 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 362 464 . + . ID=g7524.t1.exon2;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 362 464 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 698 1314 . + . ID=g7524.t1.exon3;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 698 1314 . + 1 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 1570 1608 . + . ID=g7524.t1.exon4;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 1570 1608 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 2122 2190 . + . ID=g7524.t1.exon5;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 2122 2190 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 2809 2862 . + . ID=g7524.t1.exon6;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 2809 2862 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 3112 3244 . + . ID=g7524.t1.exon7;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 3112 3244 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 3529 3604 . + . ID=g7524.t1.exon8;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 3529 3604 . + 1 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 3890 4012 . + . ID=g7524.t1.exon9;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 3890 4012 . + 0 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 4332 4476 . + . ID=g7524.t1.exon10;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 4332 4476 . + 0 ID=cds.g7524.t1;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS exon 4903 5172 . + . ID=g7524.t1.exon11;Parent=g7524.t1 NODE_2730_length_5302_cov_38.9564 AUGUSTUS CDS 4903 5172 . + 2 ID=cds.g7524.t1;Parent=g7524.t1 #PROT g7524.t1 g7524 LEARNLLDKDVGGTSDPYCVLTLGSQKRKTEVIWKNLNPVWNESFEFAVRDPQSECLEINVWDKDMGPKDDFLGLLRVPIAPLVAEMSALPFRGEQVHTQHILETAQPPSAAKWHTLQKRSERSKIRGDIYIETVLVPRNVPVATAPLPVNTKAANSSAKAGSPPNLSPLSPLSVPPSASSLTSVSSLHGSLISGVSSATASPSTQRKTVVGVASQPEGRERSDSGKGPSMFPSGLLKERSGSFKGLNQMEDGMTLGEGRRKGSFIAGAVQRAQREISRNMSAESSDDDIDMSSAKNSGRWKLIVKVLGARSLKKLQDGRLYCILSTQRSKAKSNVVEHDTNPTFNQDFMMGIEDPLVDELKLVIKHETIGPMNIKVRDRSIGVFRLPLTNIPRTEERKKQKVDQLSPPADGAVPSKYDYVQLTEPQWVALDRRSPFSVGQGEICVRMGLLKANDEEWIALDDDEIVKVEDLPEYISSQDGGSSLAKVPSFASAVSTGDAGDPSEGPVACGCDSHYEVELVNEVFPVPIAKLRDLLFENPESEFVAAYRAAKGIT # PASA_UPDATE: g739.t1, single gene model update, valid-1, status:[pasa:asmbl_512,status:12], valid-1 NODE_1136_length_13647_cov_48.335 . gene 283 13238 . + . ID=g739;Name=g739.t1 NODE_1136_length_13647_cov_48.335 . mRNA 283 13238 . + . ID=g739.t1;Parent=g739;Name=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 283 392 . + . ID=g739.t1.exon1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 283 392 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 731 978 . + . ID=g739.t1.exon2;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 731 978 . + 1 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 1216 1352 . + . ID=g739.t1.exon3;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 1216 1352 . + 2 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 1576 1662 . + . ID=g739.t1.exon4;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 1576 1662 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 1981 2139 . + . ID=g739.t1.exon5;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 1981 2139 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 2333 2482 . + . ID=g739.t1.exon6;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 2333 2482 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 2835 3193 . + . ID=g739.t1.exon7;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 2835 3193 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 3397 4378 . + . ID=g739.t1.exon8;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 3397 4378 . + 1 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 4540 4821 . + . ID=g739.t1.exon9;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 4540 4821 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 5012 5331 . + . ID=g739.t1.exon10;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 5012 5331 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 5564 8538 . + . ID=g739.t1.exon11;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 5564 8538 . + 1 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 8684 8759 . + . ID=g739.t1.exon12;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 8684 8759 . + 2 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 8977 9326 . + . ID=g739.t1.exon13;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 8977 9326 . + 1 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 9578 10014 . + . ID=g739.t1.exon14;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 9578 10014 . + 2 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 10174 10941 . + . ID=g739.t1.exon15;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 10174 10941 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 11138 11896 . + . ID=g739.t1.exon16;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 11138 11896 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 12040 12184 . + . ID=g739.t1.exon17;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 12040 12184 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 12358 12488 . + . ID=g739.t1.exon18;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 12358 12488 . + 2 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 12610 12660 . + . ID=g739.t1.exon19;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 12610 12660 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 12786 12920 . + . ID=g739.t1.exon20;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 12786 12920 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . exon 13086 13238 . + . ID=g739.t1.exon21;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . CDS 13086 13166 . + 0 ID=cds.g739.t1;Parent=g739.t1 NODE_1136_length_13647_cov_48.335 . three_prime_UTR 13167 13238 . + . ID=g739.t1.utr3p1;Parent=g739.t1 #PROT g739.t1 g739 MAPAPGAKGDLAENVLAVGDFITLFCEDSNGYLCSECPTLGRLLVQPTAKPLAQPTGAERQLQPYDTPDVKPPNTPAVASTKGTERTVPLAHTIQFADIKGKYQAAIPISLLVSHPLCSPAVFEVMVPTKYKAQQGVIKYIKDYKKKNNNERPNPATNSRYFNLLKRAETETKETIADQKRVRANPILYGQTIQLRHVLSGRFVRMVSGETAVLDRNCIRVELDKHGGKGCVFRISPRYKVRVEGDQVQRHDRIVLESMKTSGQFLGCGSRRTQFSSPSIDANSYEVSGSVTASTFLLGIHQRAASIDAAALAGVIRGGDVIRLFHSEKEGYLAAEGAYLGRNADERSDWSEGVHIRMRSKSHHLADDAGADQAESASDEPTAPTMFWQIEDAKDPLSGDPIPWKSPCRIKHLPTKSYLMVTEKGGGFEVQLTSGSSAACNRKNSNTQFYLHPATEDPTGFARESSFFHIEHANARRWISFDKGSDGKHIDGVEFPRRRYEAMMAGLHGSAESSLEAMMWDTASLRMVSSTAERGIEDAFVASRVERGLLEAANQVACAVPLIANYERITSDSDGGVVVQAKSVRLAEERATRSCIAHLTRFIVVNGLPDKRKQKLLRHFRVVDLIIDLIGKIAGRTGCANGASGQSIAASQLTEMGQSAYVLLAAFLKKARHSNSLYLAHHVPFLMRQLESGFKGLSACQRATGQVHHGSAIEVLTALVHNNIKVVERVSKDHIRSIVHLLEKEADPAYLVFLAHLCYCGGEDVHSRQTMVLDAIVSHVKSDAGSLLMRTEVKQYEPGSKGASVFVKLRTREEEVVSLQRLDPKHTAGGNIIGTNAQSKNSLSQSPDVLQEAHRKEAYYFFKAQLELLSSICAGGNVCAVRTLIKEGILNWKECLLALKSDTVPFRLRGRYADLIAKAFIEAGEKSLHGDDNGEKTDIVEHSMRDIVDDLKKWIHDFQFKSIFAREHIPNKSSRIGFIATARAENYFFGCVFRLVHRLVQSGFYLEDPSGLFESLLPVMDASTDSAFASTNEIEKGSADITADHEGSRASKISSQTSDGVESDKAESPVETWRTKDRFKRGRDNDIVASARVAALDIIGLLFHQRLDGRLRKLLKLFVVIKEQSAKRSAMPRSVIGALFAHHHLGATEVLLPLMDEKNDYPPSKETLLALSEALGVHSDDEKDFLIHCGDDIIVPKSGASHIHHVDPESNGAKFVRHLLDLSRYEHPGLVSKSIELLDDYFGQNRILFESAKRAMLLVHPDSVEFAADVSMHLSFMEHMRQSDWETQDAEKLANCLIEFTSRCELDTGSETPHHSNQEILDNADIISFALEFLQHELDLETGDNRYNYAKVAEACLKLLRAIIRGNSKKKERLFERLDVLLNKTVSRMRRTDEKAKDAEEINVLKCLALCVAEIFRDERNLCLYVREEHIGRMVELLAENHVNVPEWIAALRCLVEVEVKSVTETVPYNQSHVAKYLMRHRAQVLVMVDDSDNGKRLALLRKANPTDVEKASLYYHLRLVDLLAACAHGEGNKHIESLCQSIFDPDELFEVLVSADIPMDRKCPYIMFMRMVYLEAEEHEAMDDVGDLIGEADARRASDGVGSGGGAAVPASQARHAHAIPDALSINEMWMFLGLMEKELLAKRILMKNGTLSRKGCRTAAGRPIRVVESVVPNGGASATKGDANPMEASFVEIMRAFVPFFRRLLDDYQQRSHPDEPKLVAIARLLNDFFAVTTRKADYKQLKMCLCKAVEKLTDLADGTNRLANIADISRRQLTDDCGDEDEVDRNVLKYDEEYEEEGALNSALHHFVTNLENAVAGGNEEYHHCTKAYHAYETKTNHDAIDYPHDRNCPYVADEGLPCGAEFQHFLEAMDTKLGAVIAVTEKAAGEQLGGTSKENQPSYFSSIVHFLKVKYTHADIAGDAIVVHEDERSHEEDLEMRCLQLIRAKVQKTKCGLHAREAGEARFEKEWEAVEAAQNELIELGACEAVCHLFSSTCDQVQQEALRAAVALLDGGNKLGQQHFLKFLTSSHHENEVLSTVRRALRDATITIKEKKAMRAHAALEKQRTNDLYLTAQKTLHGNKPRAVSESASAQRESEQRESLIGVELQHISSSNRNSMVSAGAPPEKSLDVDASAHVRRHAHSGEDDLTPSEHEEGRTHVLDVLRMLQLFCENHGDLKNLMRRQEAASSASSCNIVQEAAAFFRSTYRFLDDGEEMVQLIGQTLDTLNEFSQGCQENQKVLLKCHVVAGINHILMHEVPKNIPKKAKKGTMSRRAHLHNAQVSEARGEGHGHRHGHGHGHTPPAEHDEADLLGLKIRCATLLHSMLEWTNPTAERIARELRETLYDRTIIIHLAKYFPNELRRQPLIPGPQVLKCSDHSEVSQCDYAFELYIVMKRIEELTGEVFCKADYAKAVLESVPLKMPETANDEEGPQATDASLFSGYHKSVRSVEVLRDGEIQRIHFKCTDTSRERLRKEAKDHIFWNVKRGSPTEKMQSFITFCQKQMTEMEHLDMLMKNPLSRLIIHWSTNTYWLVILVTLALNAIMLAAWTAPMEYVPPDPALNRTDGSFVDDGDWLPHTNAWFTLVLVVLGTIHIALSAALLCERFLLKPPSQLGNWQEAMTWYYIVFFGLSIAGIPLKGYPYGLHLFHIIINNDLLLRVVNSVTHNGRSLLWIAALIVVVVYDYTLACFGWQRSLFDPDNGKFCGTLWQCFVTTLNFGLRDGLGNAIPSSGDFSRVGTRALLDLSFWITVIIIGLNLVFGIILDTFSQLRDDRNAKKEDAATSCFICSVRAYDFERYGSGFANHVQNEHNMWDYVHYFIYLKNKDNTKLTSHEYYVFEMFKKGDANFFPVNKALCLTKGQDKIESTLASFEAKIDSLLGRFEQEDKRRVNEDAQRSRADREQQPKDSADS* # PASA_UPDATE: g7213.t1, single gene model update, valid-1, status:[pasa:asmbl_5490,status:12], valid-1 NODE_3054_length_4435_cov_41.0583 . gene 269 884 . + . ID=g7213;Name=g7213.t1 NODE_3054_length_4435_cov_41.0583 . mRNA 269 884 . + . ID=g7213.t1;Parent=g7213;Name=g7213.t1 NODE_3054_length_4435_cov_41.0583 . five_prime_UTR 269 270 . + . ID=g7213.t1.utr5p1;Parent=g7213.t1 NODE_3054_length_4435_cov_41.0583 . exon 269 355 . + . ID=g7213.t1.exon1;Parent=g7213.t1 NODE_3054_length_4435_cov_41.0583 . CDS 271 355 . + 0 ID=cds.g7213.t1;Parent=g7213.t1;5_prime_partial=true NODE_3054_length_4435_cov_41.0583 . exon 590 884 . + . ID=g7213.t1.exon2;Parent=g7213.t1 NODE_3054_length_4435_cov_41.0583 . CDS 590 884 . + 2 ID=cds.g7213.t1;Parent=g7213.t1;3_prime_partial=true #PROT g7213.t1 g7213 PEHDHSFADGESTRTHVSPRRTRTPVDAGSTTQVGSRSFGGACWRKVPDTRIPDIRPRVATRTRVNNNRISNSNNIVESLKSCIGLGPLAFRHSSCLCSCAFDCDSHVTTVLCVCVCAECAQYRLV # PASA_UPDATE: g7214.t1, single gene model update, valid-1, status:[pasa:asmbl_5488,status:12],[pasa:asmbl_5489,status:12], valid-1 NODE_3054_length_4435_cov_41.0583 . gene 988 3184 . - . ID=g7214;Name=g7214.t1 NODE_3054_length_4435_cov_41.0583 . mRNA 988 3184 . - . ID=g7214.t1;Parent=g7214;Name=g7214.t1 NODE_3054_length_4435_cov_41.0583 . exon 3112 3184 . - . ID=g7214.t1.exon1;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . CDS 3112 3184 . - 0 ID=cds.g7214.t1;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . exon 2459 2748 . - . ID=g7214.t1.exon2;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . CDS 2459 2748 . - 2 ID=cds.g7214.t1;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . exon 1847 2009 . - . ID=g7214.t1.exon3;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . CDS 1847 2009 . - 0 ID=cds.g7214.t1;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . exon 988 1523 . - . ID=g7214.t1.exon4;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . CDS 1255 1523 . - 2 ID=cds.g7214.t1;Parent=g7214.t1 NODE_3054_length_4435_cov_41.0583 . three_prime_UTR 988 1254 . - . ID=g7214.t1.utr3p1;Parent=g7214.t1 #PROT g7214.t1 g7214 MSHSSTPLFAVVAIGMLLSMNAMPAYASPNVVGAQRVDITCLSTQAGAFSGGSAYEDDWNKAVGFACKVIADESSELLTCTGRVIAQRKEAKSHAFGYHFGSAIDTANYILVDATPAGDITVAFTTDTDINNAVTDGTLLSQFGLEDTGMGAATSGTAALEAIFCRAQLQTLAIKPPNPSCIENVVETSLSCDHANGFIFITVPSQTASAIVSACDTTKTYSSILDTFSDCKCATPGVEPVSGNAGGTSFLFCPTRGGGKNDFK* # PASA_UPDATE: g14499.t1, single gene model update, valid-1, status:[pasa:asmbl_7157,status:12], valid-1 NODE_4262_length_1917_cov_54.779 . gene 1 1912 . + . ID=g14499;Name=g14499.t1 NODE_4262_length_1917_cov_54.779 . mRNA 1 1912 . + . ID=g14499.t1;Parent=g14499;Name=g14499.t1 NODE_4262_length_1917_cov_54.779 . five_prime_UTR 1 1 . + . ID=g14499.t1.utr5p1;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . exon 1 113 . + . ID=g14499.t1.exon1;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . CDS 2 113 . + 0 ID=cds.g14499.t1;Parent=g14499.t1;5_prime_partial=true NODE_4262_length_1917_cov_54.779 . exon 305 346 . + . ID=g14499.t1.exon2;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . CDS 305 346 . + 2 ID=cds.g14499.t1;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . exon 439 501 . + . ID=g14499.t1.exon3;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . CDS 439 501 . + 2 ID=cds.g14499.t1;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . exon 606 1912 . + . ID=g14499.t1.exon4;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . CDS 606 1549 . + 2 ID=cds.g14499.t1;Parent=g14499.t1 NODE_4262_length_1917_cov_54.779 . three_prime_UTR 1550 1912 . + . ID=g14499.t1.utr3p1;Parent=g14499.t1 #PROT g14499.t1 g14499 QRNQAYYRDEKSKLRDEKNKLRDEKNKLRDKENILLHGASLKRPRGEQDDEVLQRMDRFESVLESRLPPRKKSARLSQIDSELERNLVQATAVTRGYRKFGISAKDVARRRFSKIPAAFFWEERTESAQSDRYIPFIRSQISNPDPDHTFLVTKCQQNTHDISAEWLPADLKGCADAVVIDCGAENPLIDVTRMCTRVAFELKKEVNEAVHVRQGVGELVAAAAYSIYPVLHVLTDLATSFHFMWYELNAERERVLFVSSTTDRGVAWLFINSFLEASIGSTDVNWGEIFLNSASFVPLVMNSPVTSANVAAASGLPPVGSSIARLPMPASSSDVGNVDDLLNCMSAEDARDTFMLNLYAEIRRSHFFADLFAPSHVHDTPGHMYS* # PASA_UPDATE: g4346.t1, single gene model update, valid-1, status:[pasa:asmbl_7326,status:12], valid-1 NODE_4440_length_1615_cov_46.6578 . gene 114 1534 . - . ID=g4346;Name=g4346.t1 NODE_4440_length_1615_cov_46.6578 . mRNA 114 1534 . - . ID=g4346.t1;Parent=g4346;Name=g4346.t1 NODE_4440_length_1615_cov_46.6578 . exon 1457 1534 . - . ID=g4346.t1.exon1;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . CDS 1457 1534 . - 0 ID=cds.g4346.t1;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . exon 1053 1206 . - . ID=g4346.t1.exon2;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . CDS 1053 1206 . - 0 ID=cds.g4346.t1;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . exon 592 771 . - . ID=g4346.t1.exon3;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . CDS 592 771 . - 2 ID=cds.g4346.t1;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . exon 114 219 . - . ID=g4346.t1.exon4;Parent=g4346.t1 NODE_4440_length_1615_cov_46.6578 . CDS 114 219 . - 2 ID=cds.g4346.t1;Parent=g4346.t1;3_prime_partial=true #PROT g4346.t1 g4346 MTLIQWHHADIAKGSYYANPQYDNPTSDKKLIASFPEYCHPNIWPTEDFPLLAPAFKSLGSLIVDVGILVSKKCDQYMASLFPEQFSSQPLATNIQKSMCTKARLLHYFPRDTSEAMPDVSEHASWCGWHLDHSSLTGLTSAMFINSEGKEVPNPDPKAGLYIRNRGNRMIK # ORIGINAL: g11088.t1 original gene structure, not modified by PASA NODE_1721_length_9524_cov_40.6095 AUGUSTUS gene 5577 9395 . + . ID=g11088;Name=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS mRNA 5577 9395 . + . ID=g11088.t1;Parent=g11088;Name=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 5577 6268 . + . ID=g11088.t1.exon1;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 5577 6268 . + 0 ID=cds.g11088.t1;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 6440 8368 . + . ID=g11088.t1.exon2;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 6440 8368 . + 1 ID=cds.g11088.t1;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 8570 8813 . + . ID=g11088.t1.exon3;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 8570 8813 . + 1 ID=cds.g11088.t1;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 8946 9395 . + . ID=g11088.t1.exon4;Parent=g11088.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 8946 9395 . + 0 ID=cds.g11088.t1;Parent=g11088.t1 #PROT g11088.t1 g11088 MRTVVSSMMRQNWTGKEWLFPVFIIVAFAVMAGVCEGGRTGRLASSSFRVAVFGTGNINQTLGQITPFGALGYAGCQRALTEQGVPAGNCVYLSMPLSTTVEDLRPAIVSGLYSHFVTLGFQFAGTASDAARAYPNTTWTCVDTPTPAGITNVQGVIFSEDEAGFLAGVTAGLFTANKTLGVIAGVPFAAVKKFSNGFFLGARSTCPSCVVHLDYVPSFVDEELALNASVRMAARGVDVVFGVGGHMSSFAIFDAAARGLYVIGVDTDEKLTTFYNQSDPRAQRLITSAEKRVDIGVYFSVLDVLTGTFKAVDRLVDTSVGGVQVSPCSSTTTCNRLLQTTSVSQLDAQTGCLQTVERPRREIIEEYVSRLASRNVVSGVDSSGNFNALRTAADDAWLDLSVFGLPPPRLLGHSAVVGGGSSIVVFGGEDATSGTSVSTSYVLNYDLPQWSALKVAGASPPARKYHCAVVVDGFMYVFGGSMTVTGVDPTILLDAWRIAVPSGGAWVQLPSMPIAREGHTCAHIGSTVYLFGGRTASGEYRSDVLRYMIDTHEWSTFALESEARPLAMIGSAMVAVNTTHLLLHGGKSITVSSRALWALNVPKSTWTLLSPAADSTTLVAQELYRHAAVKVDSDRVLVTGGVGVSGSSPASYVYSIRRNEWIVVPRSFMLSEALQSFGLVVFRQTDNPIACVYPDLMDAFIVPLCIPDTRPIVLAIGGAGGASSSYSGVRALFVGVDKTLSNTTSTIQIAPCDLLETKGRGILRDLSRAVHDSVGGVAFLIIIAILLAAQFNVIPPYVLYRLWRLGYGHYGNTVPENKRLFMRPILLNWLQIGMIVIEGVQISQLVLAVEIDFGVANTLWSITSAAGLSFSFEWYYWLMFTGAFLWTTYAVCVLTRADVAISRNKIGRILMFPSTYLLPVLSTVGYMPILTTLLASYRCSYIDEGGFMETAGMCTVRCWSGMHWTYAVCSLVVLVFWPLALYTAPLWQDLLDTLDVRYTRNFHVLEAWIKISMVVSRVFLWNVPWAHLSIMAVLSLLSVMYIVKFRPCGLDWINPLRAVAFAVGTYTAVRVVMWSACVCCLYIVDSFIVAAASCMLKRMHIFIF* # ORIGINAL: g11086.t1 original gene structure, not modified by PASA NODE_1721_length_9524_cov_40.6095 AUGUSTUS gene 281 1730 . - . ID=g11086;Name=g11086.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS mRNA 281 1730 . - . ID=g11086.t1;Parent=g11086;Name=g11086.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 1698 1730 . - . ID=g11086.t1.exon1;Parent=g11086.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 1698 1730 . - 0 ID=cds.g11086.t1;Parent=g11086.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS exon 281 1612 . - . ID=g11086.t1.exon2;Parent=g11086.t1 NODE_1721_length_9524_cov_40.6095 AUGUSTUS CDS 281 1612 . - 0 ID=cds.g11086.t1;Parent=g11086.t1 #PROT g11086.t1 g11086 MKIFVAIALLAMLSLASAQVDNCAECVAEVRPVCARVGGVNGTRTTFDNACLAECNNGVVVRDGTCEMLAVEPDCFCTLEPRPVCAIRFLPRGGAKRETMTNDCVAKCEHAEILHDGVCAPLPKFPTAPCIASKEFRPVCGQGRRDGVTRTFANAQAAWCANAVILRRGDCNSTAEEDGPSAPGPDGHTPRPDELPEELKPFWPNQHDSSLFPVGRGGQDDSDCTGPQQGPQGPQQGGMGPQQGGMGPQQGGMGPQQGGMGPQQGGMGPQQGGMGPQQGGMGPQQGGMGPQQGPQGPQDGMRPQPSGDFPGARNSPFPAFETAPEIGPNGEELHPQQGQGRQGMCNGRVGAPMGASTMRAQGGRMEQPPRNDHSLLIAAVALSTISIALSVTVIVLIVRLSRNMGYAPVNMRRGSVASIDALPPYASGKASPTSKAAFGLQDFDRQHSIEEQRV* # PASA_UPDATE: g11087.t1, single gene model update, valid-1, status:[pasa:asmbl_2444,status:3], valid-1 NODE_1721_length_9524_cov_40.6095 . gene 2315 4697 . - . ID=g11087;Name=g11087.t1 NODE_1721_length_9524_cov_40.6095 . mRNA 2315 4697 . - . ID=g11087.t1;Parent=g11087;Name=g11087.t1 NODE_1721_length_9524_cov_40.6095 . five_prime_UTR 4565 4697 . - . ID=g11087.t1.utr5p1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 4478 4697 . - . ID=g11087.t1.exon1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 4478 4564 . - 0 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 4227 4370 . - . ID=g11087.t1.exon2;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 4227 4370 . - 0 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 3783 3978 . - . ID=g11087.t1.exon3;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 3783 3978 . - 0 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 3566 3655 . - . ID=g11087.t1.exon4;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 3566 3655 . - 2 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 3208 3465 . - . ID=g11087.t1.exon5;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 3208 3465 . - 2 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 2967 3063 . - . ID=g11087.t1.exon6;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 2967 3063 . - 2 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 2655 2844 . - . ID=g11087.t1.exon7;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 2655 2844 . - 1 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . exon 2315 2545 . - . ID=g11087.t1.exon8;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . CDS 2465 2545 . - 0 ID=cds.g11087.t1;Parent=g11087.t1 NODE_1721_length_9524_cov_40.6095 . three_prime_UTR 2315 2464 . - . ID=g11087.t1.utr3p1;Parent=g11087.t1 #PROT g11087.t1 g11087 MATKGTNTASLSRLEARSMTRLMAISIEDVIQEFMERHRLKKPDEILEMYMGEMSLESAPDLSHLSQLQVLWLNRNKLRTLDFLRQNIRLKQLYLQHNRIGSISDVFQGMRHLQVLLLQDNQLRGLKETVAALKILTELEVLNLFGNPAAQELNYRLYVVHNLPSLRILDRKEITEIERFKARALFEPIRETIRQSIAFGRRNVGSPDGLAAQPRAKSHRSRTKNFASLHDEERVDSGGTKGRAPGSRGGSASYAVKSKFTVSRAEYLEALTKGDPKALEHLLNGRLLDDKDRARVASMADEVQRAVTNRIRRHSVMEFHTFDWFEVGAKDSSHGTSPSPVAQNRNASVVALPALTCVDVHTQEPTVRERRGSMVSIRLK* # PASA_UPDATE: g2847.t1, single gene model update, valid-1, status:[pasa:asmbl_7145,status:12], valid-1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . gene 107 1621 . - . ID=g2847;Name=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . mRNA 107 1621 . - . ID=g2847.t1;Parent=g2847;Name=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . five_prime_UTR 1504 1621 . - . ID=g2847.t1.utr5p1;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . exon 1383 1621 . - . ID=g2847.t1.exon1;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . CDS 1383 1503 . - 0 ID=cds.g2847.t1;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . exon 954 1021 . - . ID=g2847.t1.exon2;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . CDS 954 1021 . - 2 ID=cds.g2847.t1;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . exon 107 466 . - . ID=g2847.t1.exon3;Parent=g2847.t1 NODE_4251_length_1934_cov_35.3082_potentialcontaminant . CDS 107 466 . - 0 ID=cds.g2847.t1;Parent=g2847.t1 #PROT g2847.t1 g2847 MDSKAVTVAGGRWDLLIRCEKGKQASDDAVWHVMALLKGAGLHVDVEYSPTTRKDGNKRALVKVRAPFDLLAAHAELLRFPMPTKLDGTSIPFERSKMALFVGGDEHARTCRSNVSASKDELADADHEASSFFSSTERARLVTSLVEQVKTSSLSATYIPNCAGEGVRLLDACQVNTDTANQ* # PASA_UPDATE: g2689.t1, single gene model update, valid-1, status:[pasa:asmbl_8906,status:12], valid-1 NODE_6940_length_489_cov_36.4952_potentialcontaminant . gene 1 489 . - . ID=g2689;Name=g2689.t1 NODE_6940_length_489_cov_36.4952_potentialcontaminant . mRNA 1 489 . - . ID=g2689.t1;Parent=g2689;Name=g2689.t1 NODE_6940_length_489_cov_36.4952_potentialcontaminant . exon 1 489 . - . ID=g2689.t1.exon1;Parent=g2689.t1 NODE_6940_length_489_cov_36.4952_potentialcontaminant . CDS 1 489 . - 0 ID=cds.g2689.t1;Parent=g2689.t1;5_prime_partial=true;3_prime_partial=true #PROT g2689.t1 g2689 GRTFAERAETRGSQSPRRSIVGPDDEGWYTVVGPAPRAQPAEEIDDIETANAFAALAIEEVSGVARGVTAQETLDKAAAVDNRQRALFFCTLNAEGLKRKASELAHTLHDRTDGFRADIISIQETLGKPDDDFVSISGYGGVRRNRSEQLGTKGSGGVALYIR # ORIGINAL: g2750.t1 original gene structure, not modified by PASA NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS gene 138 947 . - . ID=g2750;Name=g2750.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS mRNA 138 947 . - . ID=g2750.t1;Parent=g2750;Name=g2750.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS exon 138 947 . - . ID=g2750.t1.exon1;Parent=g2750.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS CDS 138 947 . - 0 ID=cds.g2750.t1;Parent=g2750.t1 #PROT g2750.t1 g2750 MEKLSQFLREILAGKNRLDDFSSGWYRFREYLGDASDSESRDVDKAMTEFESHFGPSFPSENETRELVAYLQCDLGIRKVLGVNSCKGFLEALFSIHGEFEQVTATDRTAQSIDSQSWNWNRPPFVEIRQLTPLEAVSSLSSSHSSDNSSDNRSDNRSDTALLLNLQDGVVQATFAPSVRATKYDTIMAKLKPAGKSVNELQACHQFFENGGRTIVVSHDGKNYAILKYLQAKCSSHIRFTKTSPRLPPHCFDLWHGPPRHHGAGVELG* # ORIGINAL: g2751.t1 original gene structure, not modified by PASA NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS gene 1139 1414 . + . ID=g2751;Name=g2751.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS mRNA 1139 1414 . + . ID=g2751.t1;Parent=g2751;Name=g2751.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS exon 1139 1414 . + . ID=g2751.t1.exon1;Parent=g2751.t1 NODE_4475_length_1566_cov_26.2119_potentialcontaminant AUGUSTUS CDS 1139 1414 . + 0 ID=cds.g2751.t1;Parent=g2751.t1 #PROT g2751.t1 g2751 MFGKPSRKTAKVAPTSAPSVETTPAPTATTATTAAPTKNFIVHMRGVPGSGKSTVMNTLRSELEARGYLVIVASPDVYHKACTADFKRCPD* # ORIGINAL: g1423.t1 original gene structure, not modified by PASA NODE_406_length_24468_cov_40.6194 AUGUSTUS gene 2 688 . + . ID=g1423;Name=g1423.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS mRNA 2 688 . + . ID=g1423.t1;Parent=g1423;Name=g1423.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 2 302 . + . ID=g1423.t1.exon1;Parent=g1423.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 2 302 . + 1 ID=cds.g1423.t1;Parent=g1423.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 629 688 . + . ID=g1423.t1.exon2;Parent=g1423.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 629 688 . + 0 ID=cds.g1423.t1;Parent=g1423.t1 #PROT g1423.t1 g1423 VGLGVGLGIGAYPSPPPPSPFVHADPSVAMGAFTDALKAMLVESRAKAQMKLAVLPQPERVVWADDRDVSADSDGDLAPEQSAQLDREVEAFRLRLEDLSAAAASPRRFSGDGPSFSFS* # ORIGINAL: g1428.t1 original gene structure, not modified by PASA NODE_406_length_24468_cov_40.6194 AUGUSTUS gene 14536 23936 . + . ID=g1428;Name=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS mRNA 14536 23936 . + . ID=g1428.t1;Parent=g1428;Name=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 14536 16119 . + . ID=g1428.t1.exon1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 14536 16119 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 16531 17329 . + . ID=g1428.t1.exon2;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 16531 17329 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 17695 17822 . + . ID=g1428.t1.exon3;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 17695 17822 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 18056 18194 . + . ID=g1428.t1.exon4;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 18056 18194 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 18515 18618 . + . ID=g1428.t1.exon5;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 18515 18618 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 19083 19292 . + . ID=g1428.t1.exon6;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 19083 19292 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 19513 19610 . + . ID=g1428.t1.exon7;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 19513 19610 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 19836 19941 . + . ID=g1428.t1.exon8;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 19836 19941 . + 1 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 20148 20276 . + . ID=g1428.t1.exon9;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 20148 20276 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 20431 20530 . + . ID=g1428.t1.exon10;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 20431 20530 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 20775 20924 . + . ID=g1428.t1.exon11;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 20775 20924 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 21264 21409 . + . ID=g1428.t1.exon12;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 21264 21409 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 21718 21856 . + . ID=g1428.t1.exon13;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 21718 21856 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 22147 22265 . + . ID=g1428.t1.exon14;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 22147 22265 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 22756 22831 . + . ID=g1428.t1.exon15;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 22756 22831 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 23019 23216 . + . ID=g1428.t1.exon16;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 23019 23216 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 23388 23491 . + . ID=g1428.t1.exon17;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 23388 23491 . + 2 ID=cds.g1428.t1;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 23700 23936 . + . ID=g1428.t1.exon18;Parent=g1428.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 23700 23936 . + 0 ID=cds.g1428.t1;Parent=g1428.t1 #PROT g1428.t1 g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g1427.t1, single gene model update, valid-1, status:[pasa:asmbl_6922,status:3], valid-1 NODE_406_length_24468_cov_40.6194 . gene 8312 13220 . + . ID=g1427;Name=g1427.t1 NODE_406_length_24468_cov_40.6194 . mRNA 8312 13220 . + . ID=g1427.t1;Parent=g1427;Name=g1427.t1 NODE_406_length_24468_cov_40.6194 . five_prime_UTR 8312 8572 . + . ID=g1427.t1.utr5p1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 8312 8639 . + . ID=g1427.t1.exon1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 8573 8639 . + 0 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 8955 9190 . + . ID=g1427.t1.exon2;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 8955 9190 . + 2 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 9447 9689 . + . ID=g1427.t1.exon3;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 9447 9689 . + 0 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 9931 10357 . + . ID=g1427.t1.exon4;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 9931 10357 . + 0 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 10596 10777 . + . ID=g1427.t1.exon5;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 10596 10777 . + 2 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 10988 12425 . + . ID=g1427.t1.exon6;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 10988 12425 . + 0 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . exon 12589 13220 . + . ID=g1427.t1.exon7;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . CDS 12589 13079 . + 2 ID=cds.g1427.t1;Parent=g1427.t1 NODE_406_length_24468_cov_40.6194 . three_prime_UTR 13080 13220 . + . ID=g1427.t1.utr3p1;Parent=g1427.t1 #PROT g1427.t1 g1427 MASTFVPTNFFPPRQLNKNGSRGVGMWAKTTTAATATTTPYTVRQRQRDQKRFEASLGRPQDKLTVGKGTDDADTRKDSSAVSTVGDSDRGVSWLLDGYYMLRACHVQDPDDAYRCKINQRSLRAVVEEDLQHFRNLTMLEANENSLQLGPLGALPAVEIMRLAFNGITDIVIAQGSFQRLASLDLSYNTLSLDALLALSELPRLESLDLTANGLSSLPAFKHSVPFFSRLTSLVLDRNSLVEEDAFCVLAPLPLLEKLSIRENQIARVLRPEPNRKLPWFNHLRSLDVANNQIATEDDLMGISVWPAIKEVIISGNALALAVKGLPLNLMYALVEERGISIIKLEPDANNRPRVHLAADKILKVKEEPLPPIARGHLQITFPSQESQEGGSSKSSMSNNSKSSVSDESDSNSDSSGSSSENSDGESDNSESSNGSDAKKKRSKKKKSKAAKIKAAKKGKPADKTTTSGKDAPATTTKSTLAPKGPTGGFFMTQVDEPASHGQHGTQSQSSSSAAVAAVTAEALSALDRSKAGAQTGVPATTMAIVPRRYIGYEALLTLDPEEGEARAVDLPTDTRGAVQALRYALARPLVFSDRPALAGYKKRMQLKRNGKESLASRTAARALSKTSPLVTSRLNKTPLVAQTLSRLGSMYEATASDSARRTSQAVGQDRRSSQYPPGDRRTSQYAGDRRTSQYAGTGDRRTSQLPGDRRASGAVGSGSGDRRTSTLPADGRRASQMPTDRRASSQVPRVTTTGAPVTTGGVRGLGAGEPPLLALAWPERRPSTVPSTPGPAGASRVAVRALASTLAELSVAPGYRAPYKESALQRARRAMAATRIKGNTKKVTVEAVVNAMNNRPTVEEGRLADVLAMPADSIDPKLSRGAARLLAKAQAEFDRVRSTTIGAAEKQMLGSMNVPELASLLVSRAGSVAQIRKQSVLTPVNAVTSVTSMTSVSMSSMGSPHPRGTSLAPLPEDGGMLRRASMSPDRKQSLSRMSSRSDSNAGESPSPGPGDRMRQLSRQYSTLMEH* # ORIGINAL: g1424.t1 original gene structure, not modified by PASA NODE_406_length_24468_cov_40.6194 AUGUSTUS gene 1484 3952 . - . ID=g1424;Name=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS mRNA 1484 3952 . - . ID=g1424.t1;Parent=g1424;Name=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 3874 3952 . - . ID=g1424.t1.exon1;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 3874 3952 . - 0 ID=cds.g1424.t1;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 2887 3616 . - . ID=g1424.t1.exon2;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 2887 3616 . - 2 ID=cds.g1424.t1;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 2300 2436 . - . ID=g1424.t1.exon3;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 2300 2436 . - 1 ID=cds.g1424.t1;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 1484 1983 . - . ID=g1424.t1.exon4;Parent=g1424.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 1484 1983 . - 2 ID=cds.g1424.t1;Parent=g1424.t1 #PROT g1424.t1 g1424 MGDERRLASVPPDVWARTHFGEHPIAVVHTDDKGYHVITTRDVHPGETLLRTRVYAAGIFKNYRKRVCAYCLSACDPATTGLRSLPLRCANCDQCYYCSEACAAADATRGHVRVCSAMRDVLASSKHDPQVDSMVRTVLQVARACATEDGEATPAEIEEGLSRIAPTPNCRAAAPSVVGAHARAVVDAVRGDAGEGDEGPLSPSLTATVTSDGGGGGGVDELEKRLRDALSLVSDVGCGLPSLRYSDLNQLQSHAGTWSRDDSTPYRHVIKAVRSLLTLGLRGMPTTELGYMHLLSRIECNGFGIWGRKEEYMGRVCAIPVGEEVCINYIDTERPASTRRQHLSDVYRFDCQCARCARELAQNAPPQKNHCKTRQPHTARPVSAPASAANVTISFGVITTPSLGASGGVQHVAANLVPRESAEGSLIPIGGTGSADDSIGAASDAVKISYDKSKSSGKNKHAKPKKKFAFDESVLAARKKQ* # ORIGINAL: g1426.t1 original gene structure, not modified by PASA NODE_406_length_24468_cov_40.6194 AUGUSTUS gene 5856 7580 . - . ID=g1426;Name=g1426.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS mRNA 5856 7580 . - . ID=g1426.t1;Parent=g1426;Name=g1426.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 5856 7580 . - . ID=g1426.t1.exon1;Parent=g1426.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 5856 7580 . - 0 ID=cds.g1426.t1;Parent=g1426.t1 #PROT g1426.t1 g1426 MAVSRRPLVAAAAGTLILIFLLTFNGSLTTDVDGVKHENIFFGRALDSIITRADESASANPVTNPVSAVPSYAKELQQYVDSDLPTVAIFLGTRPEAIKCAPLVAEMRAPHNAAVFNTAVVSTGQHREMLQQMFDSFHLSVDIELSLMVPDQTPADLMARALTHVTAVLTALHPAMVIVQGDTATALVCAMAAFFMRIPVAHVEAGLRSFDFDNPFPEEFNRRAIDILAAFHFAPTEYAAEALRRENICGREIHVTGNTGVDAILHALAQPVPPSAKEIIDRIARIDPGGVVMLVTSHRRENLGAPLASICRAVRRVVEESHRVTVVFPVHLNPNVRKVVHTLLRNLERVVLLEPLSYDILPFVMQRADLVMTDSGGIQEEAVSIGKPVILLRKTTERPEGVFVGTVRISGTDEGELYGLASGAISRIAAIKQVLQAQRVFGYGNASQITAGVLRDYFARTPEEKAEVVSGCTATKQAELARAVYGADAASHNGGSAGGWAVESRDRDLAAAVDRTEERANESLDMSVGKAKGREVDDRPSTPSPVHADAASAAGGVNAVAGADDVKDESETGV* # ORIGINAL: g1425.t1 original gene structure, not modified by PASA NODE_406_length_24468_cov_40.6194 AUGUSTUS gene 4382 5072 . + . ID=g1425;Name=g1425.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS mRNA 4382 5072 . + . ID=g1425.t1;Parent=g1425;Name=g1425.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 4382 4655 . + . ID=g1425.t1.exon1;Parent=g1425.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 4382 4655 . + 0 ID=cds.g1425.t1;Parent=g1425.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS exon 4801 5072 . + . ID=g1425.t1.exon2;Parent=g1425.t1 NODE_406_length_24468_cov_40.6194 AUGUSTUS CDS 4801 5072 . + 2 ID=cds.g1425.t1;Parent=g1425.t1 #PROT g1425.t1 g1425 MSHVTLPDIAAVNAGDKTTFVEAITTLFEPAPPLADHLYARRPYASYAAIIDAAAAFMPTATDAQRVEVLNAHPRIGESKTKLSALSLREQGYGDNDAEQEAILAQLAQLNAAYEYKYGFKFIVFVAGRPKSAIVPVLEQRLASGDRAAEMQIGLTAMIDIARDRLKKITGESAPATPSRM* # PASA_UPDATE: g6241.t1, single gene model update, valid-1, status:[pasa:asmbl_6155,status:12], valid-1 NODE_3503_length_3324_cov_36.9027 . gene 681 3324 . + . ID=g6241;Name=g6241.t1 NODE_3503_length_3324_cov_36.9027 . mRNA 681 3324 . + . ID=g6241.t1;Parent=g6241;Name=g6241.t1 NODE_3503_length_3324_cov_36.9027 . five_prime_UTR 681 739 . + . ID=g6241.t1.utr5p1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 681 851 . + . ID=g6241.t1.exon1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 740 851 . + 0 ID=cds.g6241.t1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 1130 1400 . + . ID=g6241.t1.exon2;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 1130 1400 . + 2 ID=cds.g6241.t1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 1593 1934 . + . ID=g6241.t1.exon3;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 1593 1934 . + 1 ID=cds.g6241.t1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 2499 2584 . + . ID=g6241.t1.exon4;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 2499 2584 . + 1 ID=cds.g6241.t1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 2832 2875 . + . ID=g6241.t1.exon5;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 2832 2875 . + 2 ID=cds.g6241.t1;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . exon 3090 3324 . + . ID=g6241.t1.exon6;Parent=g6241.t1 NODE_3503_length_3324_cov_36.9027 . CDS 3090 3324 . + 0 ID=cds.g6241.t1;Parent=g6241.t1;3_prime_partial=true #PROT g6241.t1 g6241 MKMVSNLVKKYEDFVLRSPEYLSQIESLARVFTYAIPGRFQDSDVFSEFVYAAFNLLGDYHDAVLRGRARELGVEIPAGDLEKDESYVRIAKLLSLIDHSEVLIEMMASRTRSDVTRYNAIAALETAKAILRLFVLFFLKKGPVPNPPLDALDREAVVDDLRAHADGKLIHTRDASALVPPSPTRSPDTPSPSKRKLVLKRSLASRVATGTVSDPLRKGVSRLRRFGASADKLGLFGSAPAGPEPKRPDVPLLPAEVLAETLKIARPLVYLIALRLCRPATESHTYPSRDAGAGQHRPSKEWTPWLVSLAMDITSLYLYRRGIDRLSRAQRSEISRRMAALLFYLVRDPLFAAFSRWDVCVCV # PASA_UPDATE: g11400.t1, single gene model update, valid-1, status:[pasa:asmbl_4458,status:3], valid-1 NODE_2502_length_6054_cov_37.4961 . gene 2483 6054 . + . ID=g11400;Name=g11400.t1 NODE_2502_length_6054_cov_37.4961 . mRNA 2483 6054 . + . ID=g11400.t1;Parent=g11400;Name=g11400.t1 NODE_2502_length_6054_cov_37.4961 . five_prime_UTR 2483 2975 . + . ID=g11400.t1.utr5p1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . exon 2483 2982 . + . ID=g11400.t1.exon1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . CDS 2976 2982 . + 0 ID=cds.g11400.t1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . exon 3406 3577 . + . ID=g11400.t1.exon2;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . CDS 3406 3577 . + 2 ID=cds.g11400.t1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . exon 3784 3974 . + . ID=g11400.t1.exon3;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . CDS 3784 3974 . + 1 ID=cds.g11400.t1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . exon 4147 6054 . + . ID=g11400.t1.exon4;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . CDS 4147 5876 . + 2 ID=cds.g11400.t1;Parent=g11400.t1 NODE_2502_length_6054_cov_37.4961 . three_prime_UTR 5877 6054 . + . ID=g11400.t1.utr3p1;Parent=g11400.t1 #PROT g11400.t1 g11400 MAAPACGSCALPLEANQPTVKALGRDFHRECLICTRCRAPPDGNYYEKDGKVYCRKDYFAMFGTQCNRCSQNINGKLMAFNNKFYHPDCFYCVACKKKIIAGEKCGLRGNDLFCETDWDPARAAQNASQTGPAPHVTGVHVPTAGPMVGGYTPGKSAQQLLLEQQQRMRASIPTIAEPHDDSDRKRVRTKISEEQIAALERAFEQTPMPDGQMREHLANSLNLNLRVIQVWFQNRRAKEKKVRGGSGHGYDSVPNSPLPTSGQSTPRLSGGSSVGGGSAGFVRRDLFAPRPNMPTMGGYASSTNTTPAVSPLVSPALSPSHHPYGMGDMPIHNFESMTLDQSQMSALNAMNAVSPQQQQQQPQRSPSLRPQPQLSALPPHARVHALESMAMRRSQSEPSLAELALGGPSINNIDLRSVLASGGDGVDRMMFDPLDGTDSAAADVHMSSLLMRGHPPQRPSVSDTQAVLEDVASAVRGGIGSDFVLDGPLTDPAADLDEWLSDILMSTERAVVDARVHEESQLLRSLGEGDFAADPFMSVMGPDDDDIPRTVPGSLARAAIDPPLLSAIPDRVLGDGSPGGLRRVKSAPLFPNKRNARNSAPVALIEKDRERERAGSPLKAQHASMKRRSAPYGLKRNESLEGRLSSSRSSLVSAIRRSRSQECLVDSNGASDFSGQDSDDSMRLDIDVTSADVELNVTL* # PASA_UPDATE: g11399.t1, single gene model update, valid-1, status:[pasa:asmbl_4456,status:12], valid-1 NODE_2502_length_6054_cov_37.4961 . gene 334 2141 . + . ID=g11399;Name=g11399.t1 NODE_2502_length_6054_cov_37.4961 . mRNA 334 2141 . + . ID=g11399.t1;Parent=g11399;Name=g11399.t1 NODE_2502_length_6054_cov_37.4961 . five_prime_UTR 334 335 . + . ID=g11399.t1.utr5p1;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . exon 334 548 . + . ID=g11399.t1.exon1;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . CDS 336 548 . + 0 ID=cds.g11399.t1;Parent=g11399.t1;5_prime_partial=true NODE_2502_length_6054_cov_37.4961 . exon 790 918 . + . ID=g11399.t1.exon2;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . CDS 790 918 . + 0 ID=cds.g11399.t1;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . exon 1312 2141 . + . ID=g11399.t1.exon3;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . CDS 1312 1824 . + 0 ID=cds.g11399.t1;Parent=g11399.t1 NODE_2502_length_6054_cov_37.4961 . three_prime_UTR 1825 2141 . + . ID=g11399.t1.utr3p1;Parent=g11399.t1 #PROT g11399.t1 g11399 ILFSAEMSGNQISPAVDTEFTGATYASYDSNMFTITINRLWTDIPFDNITLVTVQLGAGGVNGPALFNVTQNNPSNTAYTRDVTVGPLSVSQERALLRGGMYVSIQTTSNPDGEVFWMSLANGAYMSLVLYFVTYGSFYDVTNGKGVAASDQTVLGVSLEAALVLTVNLMVGLDTYNWTILNHISVWGSVVFWWLFTLATQALWTSFTMTYYGALYAAMGTAPFWFNMFLCPVVCLLPVYIYRAVTFNYAPNPIEIVRHYVLARRSEAGDDIPLTQRSMSTLTA* # PASA_UPDATE: g8466.t1, single gene model update, valid-1, status:[pasa:asmbl_1803,status:12], valid-1 NODE_1501_length_10888_cov_41.0142 . gene 4625 6673 . - . ID=g8466;Name=g8466.t1 NODE_1501_length_10888_cov_41.0142 . mRNA 4625 6673 . - . ID=g8466.t1;Parent=g8466;Name=g8466.t1 NODE_1501_length_10888_cov_41.0142 . exon 4625 6673 . - . ID=g8466.t1.exon1;Parent=g8466.t1 NODE_1501_length_10888_cov_41.0142 . CDS 4730 6673 . - 0 ID=cds.g8466.t1;Parent=g8466.t1 NODE_1501_length_10888_cov_41.0142 . three_prime_UTR 4625 4729 . - . ID=g8466.t1.utr3p1;Parent=g8466.t1 #PROT g8466.t1 g8466 MQDASRGQYDLDACIDSLLALLQQCETERHILTQCCTKARLALSPPPLTPSPGVHPPPTEHTAPSSRRTSAKTDTANAPSKPNTPLLADCSGAAVDDAPVDPELLRAERALDSILQRAQRIRNAESEAVARVPSSRATGASSAASGDRRIPTAVRASATASSRSDKRTAAQTLSTGAKGTSARADGGAVSAKMRSRAAAANTGPNSSPAAAPKAADPASKPHPSVRNLPSQPAPKSSTASAGRGAPKASGSASGKPTQAHSRVTTSARSTGPRVSTTAPASATSSAPAKPKSTVGANAIREKDSAPLQSPRPPIDSRRPFHKGGGFVDEGESDSGSRVSPTPGGRLDSDSDVCEDSAAPQLHSSAAPTEEPPTDFPREMHRLSASLRTHADAAFGWEASAAPEVGAFLGAIESRGYCQKWTSADEHAHLWPDRSDLARLLSDVESLAEAVADIQKQQPSRDASVTGNDVDRDRSSVADHYRAARTLRVARDAIAAVDSIVGALDPARYIERCVSQLGPSTTHGDGNAGGCGILNGGGVHGGHDACSQMLHALDARPRMPLAVSRAADIARCASALSALRRWDDDQALRRRLYESALVLLGGDGRDLEDAGDRRVYRLLYGLLLRGHSAAMPAFVDASSLGEALDFAV* # ORIGINAL: g8469.t1 original gene structure, not modified by PASA NODE_1501_length_10888_cov_41.0142 AUGUSTUS gene 10065 10736 . - . ID=g8469;Name=g8469.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS mRNA 10065 10736 . - . ID=g8469.t1;Parent=g8469;Name=g8469.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 10065 10736 . - . ID=g8469.t1.exon1;Parent=g8469.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 10065 10736 . - 0 ID=cds.g8469.t1;Parent=g8469.t1 #PROT g8469.t1 g8469 LVPLVTGYAGWAADAGILTTVDNVFSLSLELFGFREGICLVPGMGAREKIAMGVVLPLFLLGELILLRIAIKVSRIVRPAKKVTTASRMLHFKKSSESFASALITLTLISYDTCLKTTFNLLSCVDIGGERYLFRSASGEACYGGWQVGLFFCLVLTLLLPGFLMYFQYWCRKQRKAQKSLKAAFRQVLYVIETPFTARCRNWEAILLYYRHVIAVKIGCCIF* # ORIGINAL: g8467.t1 original gene structure, not modified by PASA NODE_1501_length_10888_cov_41.0142 AUGUSTUS gene 7221 8266 . + . ID=g8467;Name=g8467.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS mRNA 7221 8266 . + . ID=g8467.t1;Parent=g8467;Name=g8467.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 7221 7327 . + . ID=g8467.t1.exon1;Parent=g8467.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 7221 7327 . + 0 ID=cds.g8467.t1;Parent=g8467.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 7687 8266 . + . ID=g8467.t1.exon2;Parent=g8467.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 7687 8266 . + 1 ID=cds.g8467.t1;Parent=g8467.t1 #PROT g8467.t1 g8467 MTSRRLTVSGPYYLEFDGACRGNPGSCGWGAVLFGSVYGDSQLVIRQMTGVYATKAPRLVELKNRALALCDSLVAVSFHHVDRSENTVADHLANYALNGGCVDWTLPPSAGRRPRDGGCFLPVSDWNTHDRGSGIVPVIINDCIDTDAVVRMDKNSSISRSLVEHLGLETERDYDDYDDYDDYDDYDLEVVRVNFLMRGHLYEDVEMHVHEDDCDAPFVLGSDFWRSH* # ORIGINAL: g8468.t1 original gene structure, not modified by PASA NODE_1501_length_10888_cov_41.0142 AUGUSTUS gene 8765 9778 . - . ID=g8468;Name=g8468.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS mRNA 8765 9778 . - . ID=g8468.t1;Parent=g8468;Name=g8468.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 8765 9778 . - . ID=g8468.t1.exon1;Parent=g8468.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 8765 9778 . - 0 ID=cds.g8468.t1;Parent=g8468.t1 #PROT g8468.t1 g8468 MAVCLGMLFMFGLNIGLHPFRTPEGHHLECASLSILFIMSVFNIRTGLLDNLGISARAPYQLATTRAYDFTELSLLLLPVVYIAFKLLQYLYHVITTSVREKKVRVWPSFYRSSIHHVAGIDGLSKLQIIDESDVSDVSGDGTAAGMMLTAEEHGHIRRRSKVTFGNNQAVLPFGLVPLPDDVAGEFELGDRDAHVPPIAPARTDSRQGMGEGSNKLSGRTLPSTADIDARAMNARLMTSPEGASRINAWEGASSNSGSSEAASGSVTAARVTGGAGEFQSPDEPRVHVSPDGSGKGDRGADGSADGGDEDGPVMHLAVDLDDDIGSSSGMPSDIDI* # ORIGINAL: g8465.t1 original gene structure, not modified by PASA NODE_1501_length_10888_cov_41.0142 AUGUSTUS gene 1775 4145 . - . ID=g8465;Name=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS mRNA 1775 4145 . - . ID=g8465.t1;Parent=g8465;Name=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 4042 4145 . - . ID=g8465.t1.exon1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 4042 4145 . - 0 ID=cds.g8465.t1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 3759 3816 . - . ID=g8465.t1.exon2;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 3759 3816 . - 1 ID=cds.g8465.t1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 3259 3504 . - . ID=g8465.t1.exon3;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 3259 3504 . - 0 ID=cds.g8465.t1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 2770 2919 . - . ID=g8465.t1.exon4;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 2770 2919 . - 0 ID=cds.g8465.t1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 2433 2550 . - . ID=g8465.t1.exon5;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 2433 2550 . - 0 ID=cds.g8465.t1;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS exon 1775 1959 . - . ID=g8465.t1.exon6;Parent=g8465.t1 NODE_1501_length_10888_cov_41.0142 AUGUSTUS CDS 1775 1959 . - 2 ID=cds.g8465.t1;Parent=g8465.t1 #PROT g8465.t1 g8465 MDPTAFIPFMDPRDFVALLPPGIVNRILAYLDPSDLCRLSLVSSAWRRAVSPEEVWGRWARSRGWRDVDADIAGGWKKLVLMRVLGWVNWPLCVHVACDDDDVSSDVRAACERLASLQRFNVRFEGPSSILRAEIEASTSKPRFFLLVSQRTRTPHGLPDDLNSTLTALQLRQKTDPKAMRGHTFATYVFHDKALGIGHGIVQLEETLMDAGAARVYRRGHGDLTGIRAVGNRPLSRTRKLAVGQVGHIYPVHARPIGRIRTEIDGTQQACPIGTPSTRCNIAVAL* # PASA_UPDATE: g8464.t1, single gene model update, valid-1, status:[pasa:asmbl_1801,status:3], valid-1 NODE_1501_length_10888_cov_41.0142 . gene 107 2172 . + . ID=g8464;Name=g8464.t1 NODE_1501_length_10888_cov_41.0142 . mRNA 107 2172 . + . ID=g8464.t1;Parent=g8464;Name=g8464.t1 NODE_1501_length_10888_cov_41.0142 . five_prime_UTR 107 223 . + . ID=g8464.t1.utr5p1;Parent=g8464.t1 NODE_1501_length_10888_cov_41.0142 . five_prime_UTR 353 440 . + . ID=g8464.t1.utr5p2;Parent=g8464.t1 NODE_1501_length_10888_cov_41.0142 . exon 107 223 . + . ID=g8464.t1.exon1;Parent=g8464.t1 NODE_1501_length_10888_cov_41.0142 . exon 353 2172 . + . ID=g8464.t1.exon2;Parent=g8464.t1 NODE_1501_length_10888_cov_41.0142 . CDS 441 1673 . + 0 ID=cds.g8464.t1;Parent=g8464.t1 NODE_1501_length_10888_cov_41.0142 . three_prime_UTR 1674 2172 . + . ID=g8464.t1.utr3p1;Parent=g8464.t1 #PROT g8464.t1 g8464 MSANRQKGQPQTWLDWSVSTYKYTRQYVSERFGRGSRTVDLDVDARISWLNDTSNRLHELRRLVGQMQVNLTALIASQSSLAITMHDLGMRTPGLETEFTRNADLQRRLARMGHIVIVAIAGCADNLETFTLKAVGDCESTIRSYESARTLYDAARVDLERLDPSSFNEHGMPLSPYPPLPEEFPSATKQKVLDARKELDARHVEFEQLRQDVHVKLSLLDAHKNAVLRRVLPAFHDAMTAYAAGDLAKLEGIVLQKRTSMPDWSGADQTPLALDRPQGLQQQQQQQQQQQQQEYQASEGAGSSAPTDKHTTSTGKNPASESDEASGSPTNALLEGGKDNAHVIDTYVHAADESNDAHNAHGDGGHTEARADADTDTDRAADASASALDRDGAVAAAPHRPLQEEEQAQI* # ORIGINAL: g2852.t1 original gene structure, not modified by PASA NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS gene 1 354 . - . ID=g2852;Name=g2852.t1 NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS mRNA 1 354 . - . ID=g2852.t1;Parent=g2852;Name=g2852.t1 NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS exon 304 354 . - . ID=g2852.t1.exon1;Parent=g2852.t1 NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS CDS 304 354 . - 0 ID=cds.g2852.t1;Parent=g2852.t1 NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS exon 1 65 . - . ID=g2852.t1.exon2;Parent=g2852.t1 NODE_8470_length_369_cov_18.1735_potentialcontaminant AUGUSTUS CDS 1 65 . - 0 ID=cds.g2852.t1;Parent=g2852.t1 #PROT g2852.t1 g2852 MADDRNVNVLSFTGSTAIGREVNVAVQRRFGRSIMELG # PASA_UPDATE: g7371.t1, single gene model update, valid-1, status:[pasa:asmbl_7217,status:12], valid-1 NODE_4316_length_1832_cov_32.0125 . gene 573 1709 . + . ID=g7371;Name=g7371.t1 NODE_4316_length_1832_cov_32.0125 . mRNA 573 1709 . + . ID=g7371.t1;Parent=g7371;Name=g7371.t1 NODE_4316_length_1832_cov_32.0125 . five_prime_UTR 573 573 . + . ID=g7371.t1.utr5p1;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . exon 573 645 . + . ID=g7371.t1.exon1;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . CDS 574 645 . + 0 ID=cds.g7371.t1;Parent=g7371.t1;5_prime_partial=true NODE_4316_length_1832_cov_32.0125 . exon 822 912 . + . ID=g7371.t1.exon2;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . CDS 822 912 . + 0 ID=cds.g7371.t1;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . exon 1265 1362 . + . ID=g7371.t1.exon3;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . CDS 1265 1362 . + 2 ID=cds.g7371.t1;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . exon 1629 1709 . + . ID=g7371.t1.exon4;Parent=g7371.t1 NODE_4316_length_1832_cov_32.0125 . CDS 1629 1709 . + 0 ID=cds.g7371.t1;Parent=g7371.t1 #PROT g7371.t1 g7371 DLLEGELETVGIRLNRRRPNIYFKPKTAGGIGFTATCKLTNISEKLVQLILHEYKIFNAEVIIREDCSAEELIDVIVGNRKYLRCIYCYNKIDQITIEEVDRIARQPDSIVVR* # ORIGINAL: g13946.t1 original gene structure, not modified by PASA NODE_970_length_15264_cov_41.6838 AUGUSTUS gene 12617 14988 . - . ID=g13946;Name=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS mRNA 12617 14988 . - . ID=g13946.t1;Parent=g13946;Name=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 14923 14988 . - . ID=g13946.t1.exon1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 14923 14988 . - 0 ID=cds.g13946.t1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 14421 14562 . - . ID=g13946.t1.exon2;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 14421 14562 . - 0 ID=cds.g13946.t1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 13944 14093 . - . ID=g13946.t1.exon3;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 13944 14093 . - 2 ID=cds.g13946.t1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 13485 13559 . - . ID=g13946.t1.exon4;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 13485 13559 . - 2 ID=cds.g13946.t1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 12990 13249 . - . ID=g13946.t1.exon5;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 12990 13249 . - 2 ID=cds.g13946.t1;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 12617 12757 . - . ID=g13946.t1.exon6;Parent=g13946.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 12617 12757 . - 0 ID=cds.g13946.t1;Parent=g13946.t1 #PROT g13946.t1 g13946 MFKSALMPLSITFKVEDNSEYVAIFKTGDDLRQDQLIVQIITLMDRLLRREHLDLKLTPYKVLATSSDTGLVQFVRAVPVAGVLFEHGTLQAFFKMHHADDSAPYGIAPDVMDTYVKSCAGYCVITYLLGIGDRHLDNLLLTDKGHLFHIDFGFILGRDPKPFPPPMKLCKEMVEAMGSANSPDYKRFLAHCYNAFLILRRSANLILNLFSLMVDANIPDIALEPDRAVVKVQEKFRLDLTEEEAVQFFQSLVNESVSALFPQMVETIHKWAQYWRK* # PASA_UPDATE: g13945.t1, single gene model update, valid-1, status:[pasa:asmbl_10177,status:3], valid-1 NODE_970_length_15264_cov_41.6838 . gene 9003 11842 . + . ID=g13945;Name=g13945.t1 NODE_970_length_15264_cov_41.6838 . mRNA 9003 11842 . + . ID=g13945.t1;Parent=g13945;Name=g13945.t1 NODE_970_length_15264_cov_41.6838 . five_prime_UTR 9003 9100 . + . ID=g13945.t1.utr5p1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 9003 9205 . + . ID=g13945.t1.exon1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 9101 9205 . + 0 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 9324 9582 . + . ID=g13945.t1.exon2;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 9324 9582 . + 0 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 9739 9959 . + . ID=g13945.t1.exon3;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 9739 9959 . + 2 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 10392 10557 . + . ID=g13945.t1.exon4;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 10392 10557 . + 0 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 10860 11212 . + . ID=g13945.t1.exon5;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 10860 11212 . + 2 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . exon 11508 11842 . + . ID=g13945.t1.exon6;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . CDS 11508 11744 . + 0 ID=cds.g13945.t1;Parent=g13945.t1 NODE_970_length_15264_cov_41.6838 . three_prime_UTR 11745 11842 . + . ID=g13945.t1.utr3p1;Parent=g13945.t1 #PROT g13945.t1 g13945 MFGAIRSLGCASHTSRTVLFSLRLCQPVNALSMLAHGGQDDSGHMHSHAPAESPAHSMAHPSPTHAVEEANAHARRPHSRTALSIDDVLDENFAGMTHTTKALVGGVLAHDRATLARSITLAESSVPEHQRQARMLLASILQRTTSGKARPDTLPRHLPTTFRVGISGPPGSGKSTFIEALGKYLTSKSLRVAVLAVDPSSTRTGGSILGDKTRMTELSRDPLAYVRPSPSRGTLGGVAKHTSEAIVLCEAAGYEVVLIETVGVGQSETMVADMVDAFALLVPPAGGDELQGIKKGIVELADIVIVNKSDGELEGPARKTHAEYTSALKLLRPPSELWTPRVTRVSSLTGVGVAETWGALEEYYSALEESGEIHRRRCDQRRLRMYSRISDELMVRFHDHALVRRVLPQAERRVMAGLMTPATAADHLLSLFIAHPEDGLPVGGAA* # ORIGINAL: g13943.t1 original gene structure, not modified by PASA NODE_970_length_15264_cov_41.6838 AUGUSTUS gene 289 3813 . - . ID=g13943;Name=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS mRNA 289 3813 . - . ID=g13943.t1;Parent=g13943;Name=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 3618 3813 . - . ID=g13943.t1.exon1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 3618 3813 . - 0 ID=cds.g13943.t1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 2994 3308 . - . ID=g13943.t1.exon2;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 2994 3308 . - 2 ID=cds.g13943.t1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 2637 2878 . - . ID=g13943.t1.exon3;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 2637 2878 . - 2 ID=cds.g13943.t1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 2080 2233 . - . ID=g13943.t1.exon4;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 2080 2233 . - 0 ID=cds.g13943.t1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 1557 1754 . - . ID=g13943.t1.exon5;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 1557 1754 . - 2 ID=cds.g13943.t1;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS exon 289 1247 . - . ID=g13943.t1.exon6;Parent=g13943.t1 NODE_970_length_15264_cov_41.6838 AUGUSTUS CDS 289 1247 . - 2 ID=cds.g13943.t1;Parent=g13943.t1 #PROT g13943.t1 g13943 MAAGAGDAELYCICKQPYSDVDFMVSCDGCNDWFHGRCVGVTEEDARFLEKYHCPQCEKKFGPSVMKRKSRAQFERLLELEKRGVDDEEVRVEEIAAPLVARDFVKRLRDRRDKFLPGTECYLELKGAEFTVEYIESQGFDRPILVRNKEGLGLGLPDPSFTVEDVKAAIGMDRRLDVIDVATQHEEAWTLGDFAEYYRTPADQRQRPLNVISLEFSKSPLAKMVSAPAIVRKLDWIDNAWPSVEKDSGPQVFYFIEPTKENLQTFRQWGSSPTQADIFLGDLVDKCYEAVLEEGFTMFIPAGWIHAVHTPDDSLVFGGNFLHNYAADLQFQVYDVERKIKVPEKFSFPLFEEICWFAAKKFVDKYKQEGLPETGNVHMHKFAAVTAAVLGRWARKPAHRERVPSGILPDSLVSRLLKIATTSKGIEPSPLKIMLTLKGAPAAHGDAGSDAPRARLARVGGGSDSDTDAAGAPNATVVAQQPSSRLRRLVKLGSGSDSDDDGVHAATIQSAASSTAQVVATKAVVVAVVEDPISANFVKPPPSVPVIAVAKVEGPISSKSSTNTPTPTPTSNPPTPKISLRLPAATQIVSRGPTSVEKEMAVAAGAASAGASQVPPKTMLKLTLKVSAPAPSAATDHGGRDKKAKKEKKEKKEKKEKKGKKENSGSYKHNTRTKAKKRPVARCGSAL* # PASA_UPDATE: g13944.t1, single gene model update, valid-1, status:[pasa:asmbl_10176,status:12], valid-1 NODE_970_length_15264_cov_41.6838 . gene 4710 7249 . + . ID=g13944;Name=g13944.t1 NODE_970_length_15264_cov_41.6838 . mRNA 4710 7249 . + . ID=g13944.t1;Parent=g13944;Name=g13944.t1 NODE_970_length_15264_cov_41.6838 . exon 4710 5185 . + . ID=g13944.t1.exon1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . CDS 4710 5185 . + 0 ID=cds.g13944.t1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . exon 5385 5506 . + . ID=g13944.t1.exon2;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . CDS 5385 5506 . + 1 ID=cds.g13944.t1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . exon 5720 5883 . + . ID=g13944.t1.exon3;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . CDS 5720 5883 . + 2 ID=cds.g13944.t1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . exon 6106 6452 . + . ID=g13944.t1.exon4;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . CDS 6106 6452 . + 0 ID=cds.g13944.t1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . exon 6753 7249 . + . ID=g13944.t1.exon5;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . CDS 6753 6936 . + 1 ID=cds.g13944.t1;Parent=g13944.t1 NODE_970_length_15264_cov_41.6838 . three_prime_UTR 6937 7249 . + . ID=g13944.t1.utr3p1;Parent=g13944.t1 #PROT g13944.t1 g13944 MQADHAIAQPPETIRLIPASRRIALVANTSRTSTGGTSRREQYVLLDDVCAAAGLDSARLLDTYPGLRRQLASSDERDLLISAGIISDGNINAVLVNATDADALLSGDVDAAFSVLPIAKSIRRTRAATGWHLNAPAPPTVSEVQKRTTKRRKKYYGVRLCWDTDAQAEVKEDDALIPVRVDVDTDGHKVRDTFTWNKNEHLMTTERFAEQFCDDLNVPATVVHAVDSAIKSQLQKFAPYVGSEDFGDCRVAIKIDLNVGDTNLIDQFEWDINSPSNDPEEFAIRTCAELGLAGEFVPAIAHSVREQLQWYARSLIVGRTGRGEIAAEPLPPVDAPFREANEADNWSPRIELLDDQDIQKKVQSQERNARRIRRQQNVGPQDVVGWSSTPLPSTYTSNIVRPPMKAHVPVKMLRNKEKSTTSKRPKRSGR* # PASA_UPDATE: g3841.t1, single gene model update, valid-1, status:[pasa:asmbl_5469,status:12], valid-1 NODE_3044_length_4463_cov_38.1379 . gene 133 1800 . + . ID=g3841;Name=g3841.t1 NODE_3044_length_4463_cov_38.1379 . mRNA 133 1800 . + . ID=g3841.t1;Parent=g3841;Name=g3841.t1 NODE_3044_length_4463_cov_38.1379 . five_prime_UTR 133 134 . + . ID=g3841.t1.utr5p1;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . exon 133 288 . + . ID=g3841.t1.exon1;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . CDS 135 288 . + 0 ID=cds.g3841.t1;Parent=g3841.t1;5_prime_partial=true NODE_3044_length_4463_cov_38.1379 . exon 456 644 . + . ID=g3841.t1.exon2;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . CDS 456 644 . + 2 ID=cds.g3841.t1;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . exon 926 1800 . + . ID=g3841.t1.exon3;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . CDS 926 1089 . + 2 ID=cds.g3841.t1;Parent=g3841.t1 NODE_3044_length_4463_cov_38.1379 . three_prime_UTR 1090 1800 . + . ID=g3841.t1.utr3p1;Parent=g3841.t1 #PROT g3841.t1 g3841 IDVIPASVDALLANGFAREEVLCRIVSRGRANDSDVSSIGNDLANERVEASRTAGTATRGALAGAIVGGICGGVVLVVAVVAVERWRVRRERATWAQKHADLLDALGDLEQTAKTVASKDPTVRARNVDNLRKFEQSLVSNKGDLTALRQSLGASEAAKKGSSADAKR* # ORIGINAL: g3842.t1 original gene structure, not modified by PASA NODE_3044_length_4463_cov_38.1379 AUGUSTUS gene 2063 2671 . - . ID=g3842;Name=g3842.t1 NODE_3044_length_4463_cov_38.1379 AUGUSTUS mRNA 2063 2671 . - . ID=g3842.t1;Parent=g3842;Name=g3842.t1 NODE_3044_length_4463_cov_38.1379 AUGUSTUS exon 2063 2671 . - . ID=g3842.t1.exon1;Parent=g3842.t1 NODE_3044_length_4463_cov_38.1379 AUGUSTUS CDS 2063 2671 . - 0 ID=cds.g3842.t1;Parent=g3842.t1 #PROT g3842.t1 g3842 MGGMGPPPGVMGGGMGPMGPMGGMRPMGPPPMNPSLLGNPPQRPPMGMGPGGAPMGPPPMMGGGGGAGMGQGPPGPYGQRPPFMPPPMHPMGMGPPPQQQQFQQQQQQQQHQQQQPPQQHMQQPPQQQHQQQPLSSLSHEYAAPPTVSSQPQSLLPSQPPADDGQSRDEPEQPAQPAPAPAPVASGYIHPARLAMIQASRGR* # ORIGINAL: g8729.t1 original gene structure, not modified by PASA NODE_3951_length_2470_cov_52.8042 AUGUSTUS gene 657 2058 . + . ID=g8729;Name=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS mRNA 657 2058 . + . ID=g8729.t1;Parent=g8729;Name=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS exon 657 727 . + . ID=g8729.t1.exon1;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS CDS 657 727 . + 0 ID=cds.g8729.t1;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS exon 953 1097 . + . ID=g8729.t1.exon2;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS CDS 953 1097 . + 1 ID=cds.g8729.t1;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS exon 1401 1436 . + . ID=g8729.t1.exon3;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS CDS 1401 1436 . + 0 ID=cds.g8729.t1;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS exon 1592 1671 . + . ID=g8729.t1.exon4;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS CDS 1592 1671 . + 0 ID=cds.g8729.t1;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS exon 1869 2058 . + . ID=g8729.t1.exon5;Parent=g8729.t1 NODE_3951_length_2470_cov_52.8042 AUGUSTUS CDS 1869 2058 . + 1 ID=cds.g8729.t1;Parent=g8729.t1 #PROT g8729.t1 g8729 MGKEIDVRGTSSEAIRDMCQDTAQNVPKPTKNLIMRQARCLMDKSREVGERLAQKSGSSSSLLGYDMLFCVFRTSSQEDLIATNEATHGADAEDCAQPSAEAAEISDEQYRALINTLDDEKKRVETLETNIATYEVLTIAESRHGVSLPMPSIAYVAVVESFKYFNPSSFVCS* # PASA_UPDATE: g52.t1, single gene model update, valid-1, status:[pasa:asmbl_6605,status:12], valid-1 NODE_3816_length_2690_cov_42.2704 . gene 1559 2644 . + . ID=g52;Name=g52.t1 NODE_3816_length_2690_cov_42.2704 . mRNA 1559 2644 . + . ID=g52.t1;Parent=g52;Name=g52.t1 NODE_3816_length_2690_cov_42.2704 . five_prime_UTR 1559 1763 . + . ID=g52.t1.utr5p1;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . exon 1559 1939 . + . ID=g52.t1.exon1;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . CDS 1764 1939 . + 0 ID=cds.g52.t1;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . exon 2139 2271 . + . ID=g52.t1.exon2;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . CDS 2139 2271 . + 1 ID=cds.g52.t1;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . exon 2510 2644 . + . ID=g52.t1.exon3;Parent=g52.t1 NODE_3816_length_2690_cov_42.2704 . CDS 2510 2644 . + 0 ID=cds.g52.t1;Parent=g52.t1 #PROT g52.t1 g52 MNGAATADGAAGHDGGQPGTNGDVTTTRRPITRTTVSLSVLIESLVQKSYRDLDELSKLLPQKSSLERKLLLLDYFQCTRQQFLRLYIALKWIADSDGVRKCWDMMTFLDDQSAMFVGTADALYFLREKLTNARLVHYIRMHLGVLC* # ORIGINAL: g51.t1 original gene structure, not modified by PASA NODE_3816_length_2690_cov_42.2704 AUGUSTUS gene 266 819 . - . ID=g51;Name=g51.t1 NODE_3816_length_2690_cov_42.2704 AUGUSTUS mRNA 266 819 . - . ID=g51.t1;Parent=g51;Name=g51.t1 NODE_3816_length_2690_cov_42.2704 AUGUSTUS exon 775 819 . - . ID=g51.t1.exon1;Parent=g51.t1 NODE_3816_length_2690_cov_42.2704 AUGUSTUS CDS 775 819 . - 0 ID=cds.g51.t1;Parent=g51.t1 NODE_3816_length_2690_cov_42.2704 AUGUSTUS exon 266 463 . - . ID=g51.t1.exon2;Parent=g51.t1 NODE_3816_length_2690_cov_42.2704 AUGUSTUS CDS 266 463 . - 0 ID=cds.g51.t1;Parent=g51.t1 #PROT g51.t1 g51 MSGTEDAPVAMEVEEGGPSDVPVDAQGGSAATTPMKGGRAGDESKTRRAAESKELEAEMVRARATSTAICVSAVSCAHAP* # ORIGINAL: g4321.t1 original gene structure, not modified by PASA NODE_2870_length_4886_cov_34.5178 AUGUSTUS gene 1745 4699 . + . ID=g4321;Name=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS mRNA 1745 4699 . + . ID=g4321.t1;Parent=g4321;Name=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 1745 1805 . + . ID=g4321.t1.exon1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 1745 1805 . + 0 ID=cds.g4321.t1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 1990 2348 . + . ID=g4321.t1.exon2;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 1990 2348 . + 2 ID=cds.g4321.t1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 3578 3644 . + . ID=g4321.t1.exon3;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 3578 3644 . + 0 ID=cds.g4321.t1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 3905 4241 . + . ID=g4321.t1.exon4;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 3905 4241 . + 2 ID=cds.g4321.t1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 4367 4524 . + . ID=g4321.t1.exon5;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 4367 4524 . + 1 ID=cds.g4321.t1;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS exon 4695 4699 . + . ID=g4321.t1.exon6;Parent=g4321.t1 NODE_2870_length_4886_cov_34.5178 AUGUSTUS CDS 4695 4699 . + 2 ID=cds.g4321.t1;Parent=g4321.t1 #PROT g4321.t1 g4321 MSDDAEEQFKAAEDDYLEDYGEDTEWPASGGDDLPADEVPVAVAAPEPSKPIANGAAIHSAQDTNPTTQTPKQPQDAKSPGEKEEGETTHEPLADLSKNTFGEPELSPEAKMRLKATFDAEFNRRKGFVIAGLPFETRAEDVTSEILKDCGKVASVTMERKPDSSTARVLFESPDDVQRAFEKVQAKRKFRSKDFTVQHLPTDAMVFVGNIPLSLDDNGLRALLQHVGPIVRAFVVRNEHTGRSRRYGFVEFERRHVFVSAFACVSVYVYVYVYGEDAARSKNELAKVDLQGNRVRLDVCSDSLLTQESIQTRTVFVSQLPREFRETV* # PASA_UPDATE: g1611.t1, single gene model update, valid-1, status:[pasa:asmbl_410,status:12], valid-1 NODE_1109_length_13892_cov_40.7408 . gene 7863 13746 . + . ID=g1611;Name=g1611.t1 NODE_1109_length_13892_cov_40.7408 . mRNA 7863 13746 . + . ID=g1611.t1;Parent=g1611;Name=g1611.t1 NODE_1109_length_13892_cov_40.7408 . five_prime_UTR 7863 8071 . + . ID=g1611.t1.utr5p1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 7863 8142 . + . ID=g1611.t1.exon1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 8072 8142 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 8266 8510 . + . ID=g1611.t1.exon2;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 8266 8510 . + 1 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 8666 8778 . + . ID=g1611.t1.exon3;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 8666 8778 . + 2 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 8927 9147 . + . ID=g1611.t1.exon4;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 8927 9147 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 9423 9589 . + . ID=g1611.t1.exon5;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 9423 9589 . + 1 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 9733 9767 . + . ID=g1611.t1.exon6;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 9733 9767 . + 2 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 9935 10012 . + . ID=g1611.t1.exon7;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 9935 10012 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 10179 10343 . + . ID=g1611.t1.exon8;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 10179 10343 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 10480 10611 . + . ID=g1611.t1.exon9;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 10480 10611 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 10758 10856 . + . ID=g1611.t1.exon10;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 10758 10856 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 11019 11336 . + . ID=g1611.t1.exon11;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 11019 11336 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 11494 11577 . + . ID=g1611.t1.exon12;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 11494 11577 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 11797 11955 . + . ID=g1611.t1.exon13;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 11797 11955 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 12145 12225 . + . ID=g1611.t1.exon14;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 12145 12225 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 12390 12558 . + . ID=g1611.t1.exon15;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 12390 12558 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 12759 12883 . + . ID=g1611.t1.exon16;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 12759 12883 . + 2 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 13046 13176 . + . ID=g1611.t1.exon17;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 13046 13176 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 13381 13489 . + . ID=g1611.t1.exon18;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 13381 13489 . + 1 ID=cds.g1611.t1;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . exon 13648 13746 . + . ID=g1611.t1.exon19;Parent=g1611.t1 NODE_1109_length_13892_cov_40.7408 . CDS 13648 13746 . + 0 ID=cds.g1611.t1;Parent=g1611.t1 #PROT g1611.t1 g1611 MTFEDPEAPKGVEHHEELQTEDITIELKDTSPDVIGDSIAPHADSDSEESEPHGDMAADFKDVDNMHVEATEVFDDEHELLLKTDWKTGLDTTLAEERLLKFGRNEITEVKQSKLLKFLLYFWGPIAFLIEAAAILAAALKDWLDFGIIMGLLFVNAFIGYIEETRAESALDALRQTLAQRSRVFRDGKLTEIESALLVPGDIIVVRLGDIVPADGRLLGIGVTGEPAECDLHVDQSALTGESLPVAKHKGATIYSSSIVKQGQMLAVVTATGDKTFIGRAANLIAITNEPGHFQKVIEKIGNFLIIITIALVGIMVIVRLARGFKVIDTIEDALVITIAAIPVGLPTVLSVTMAVGAKQLAAKQVIVKRLTAVEEMAGIDILCSDKTGTLTLNHLTMDKPYLESGCTEDYLLLNALLSSEPGANDPIESAVRTAAVPVVFKEYLAGMEARGEIVEGKEPHIPSVPEGYRILSFRPFDPVAKYTCATVEDQSTSKSFKVAKGAPHVIIRMCGDSHEAHDAVNAFAARGLRALGVARAEVVPGRKDEWKMIGLLSFLDPPRHDSAETIKNCNKYGVSVKMVTGDQLVIAKEVAQRLGMARTILDSHKLVDPNVSEQDLCRRCEKGDGFAQVIPEHKFRVVELLQKRGHLVGMTGDGVNDAPALKKANVGIAVHGCTDAARSAADIVLLAPGLSTIIDGIKVSRAIFQRMRSYALYRITSTIHFLIFFFITILALDWALPPKLIVLITLLNDAATLVISVDNARINQRPDKWRLGQLISLSFVLAIMLVAASFAHYFIAKDVFNVSDDELDTIMYLQVSSCPHFVIFGTRLQQPFWTSRPSLVFFLAVAGTQVFAMFISVYGVIAYPM* # ORIGINAL: g1609.t1 original gene structure, not modified by PASA NODE_1109_length_13892_cov_40.7408 AUGUSTUS gene 126 2068 . - . ID=g1609;Name=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS mRNA 126 2068 . - . ID=g1609.t1;Parent=g1609;Name=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 1858 2068 . - . ID=g1609.t1.exon1;Parent=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 1858 2068 . - 0 ID=cds.g1609.t1;Parent=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 1344 1546 . - . ID=g1609.t1.exon2;Parent=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 1344 1546 . - 2 ID=cds.g1609.t1;Parent=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 126 1136 . - . ID=g1609.t1.exon3;Parent=g1609.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 126 1136 . - 0 ID=cds.g1609.t1;Parent=g1609.t1 #PROT g1609.t1 g1609 MQCVSTCTGWMRTCPRTSAVHALRGRRRRCGVAIVLLLVALATVQLYGVARDSFLHTLPVGHRMGINARAGIAALPFGVELEFAGLGDMHAQHVNNVPEANHETVLSLVSAVFGVRDPLVRHSVLPFPDPRQPQNVRMIRTSAWTDPLRRDWKVTSESVTVAGVYDGYEVIFPAMTDYDELQRVGAALSEAPFLGKGEKSGLHVHVDGSCLVEGDPSRTSTGADGLVHLLLLHAAIEPLIRRLFGTRHYGGSLNPYSHPIGSVHPQLMDDVRNMLQLRGNEGVTVGDVLAVFLRHLDKELDVLNIPRDGNASPAVLVTVADDGDSGSSGAVDRFHPRRRVFKYYSLNLSNLIPLNSAFRVGRPTVEFRAFDLLAPDQVVLAAKLADAVVAAACSPTAHELRRDIDMMFAKGGASRYVPADGEMAVLGLVEDADAIRVLAADVISTLGLAEDEFRPLLDAIKAERASDWAEPIVR* # ORIGINAL: g1610.t1 original gene structure, not modified by PASA NODE_1109_length_13892_cov_40.7408 AUGUSTUS gene 2567 5133 . - . ID=g1610;Name=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS mRNA 2567 5133 . - . ID=g1610.t1;Parent=g1610;Name=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 4642 5133 . - . ID=g1610.t1.exon1;Parent=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 4642 5133 . - 0 ID=cds.g1610.t1;Parent=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 4376 4539 . - . ID=g1610.t1.exon2;Parent=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 4376 4539 . - 0 ID=cds.g1610.t1;Parent=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS exon 2567 4232 . - . ID=g1610.t1.exon3;Parent=g1610.t1 NODE_1109_length_13892_cov_40.7408 AUGUSTUS CDS 2567 4232 . - 1 ID=cds.g1610.t1;Parent=g1610.t1 #PROT g1610.t1 g1610 MAEPTAKTAKRAVIGENSKQDDMEADRCRMDGPYLTTNTGCRQGNNQDSLKAGNRGPTLLEDHFLREKITHFDHERIPERVVHARGHGVHGFFEVYKSLADITRAKFLCDPTMRTPTFVRFSTVVGSAGSADTVRDVRGFATKFYTEEGIFDLVGNAIPVFFIQDAMKFPDLIHAAKPRGDNNMPQAQTAHDEFWDFISLTPESAHMVMWILSDRAIPRSFRMVEGFGVHTFKLVNEAGQVTFVKFHWKPKLGVHSLVWDEASKLAGKDPDFLKRDMWRAVEEGHFPEWELALQLIPEGDEHKFDFDVLDATKLWPEEAVPLQRVGRMVLNRNVDNFFAETEQVAFHPAHIVPGIDFSDDPLLQGRLFSYIDTQLNRFGSVNYNELPINRPLAPVANERRDGFMRHRINVHHVNYEPNTLAKGCPMAAPWSAGGFVTQLQRIPASEKVRGKPESFQDHFSQAKLFYNSLGAVEKLHVISAAQFELGKCNFPHVREAVVEMLGKIDNELATRVALGLGLNAKSSLSTAAAAAKEKIGAVAEVLMHPFKVTHSPSLSQLNQPMDSIQGRVVAVLVGRGFDAKSLRPLQDALVRGQASVTLVAPTLGPLLTSDGDESPAVEQSLVTAESIMYDAVIVASGAGSVDDLVSEGRSLHFVKEAFMHCKAIAAIGDGIDLLEEADLPGIELAGKGTREVGRRRLRYGDLAEKAAAMPELPSEVPMPEEEYRTGHLTIHEGVITATKDAEMNEVAAAFVRAIAKHRHWGRQMKKLDCRVDA* # PASA_UPDATE: g2696.t1, single gene model update, valid-1, status:[pasa:asmbl_8590,status:12], valid-1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . gene 206 430 . + . ID=g2696;Name=g2696.t1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . mRNA 206 430 . + . ID=g2696.t1;Parent=g2696;Name=g2696.t1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . five_prime_UTR 206 209 . + . ID=g2696.t1.utr5p1;Parent=g2696.t1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . exon 206 430 . + . ID=g2696.t1.exon1;Parent=g2696.t1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . CDS 210 311 . + 0 ID=cds.g2696.t1;Parent=g2696.t1 NODE_6325_length_592_cov_39.3075_potentialcontaminant . three_prime_UTR 312 430 . + . ID=g2696.t1.utr3p1;Parent=g2696.t1 #PROT g2696.t1 g2696 MGPSPSGGGGKGKETINVTGATKLDGKSSGGCC* # PASA_UPDATE: g8278.t1, single gene model update, valid-1, status:[pasa:asmbl_10069,status:12],[pasa:asmbl_10073,status:12], valid-1 NODE_946_length_15609_cov_38.1275 . gene 8738 15065 . - . ID=g8278;Name=g8278.t1 NODE_946_length_15609_cov_38.1275 . mRNA 8738 15065 . - . ID=g8278.t1;Parent=g8278;Name=g8278.t1 NODE_946_length_15609_cov_38.1275 . five_prime_UTR 15064 15065 . - . ID=g8278.t1.utr5p1;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . exon 14654 15065 . - . ID=g8278.t1.exon1;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . CDS 14654 15063 . - 0 ID=cds.g8278.t1;Parent=g8278.t1;5_prime_partial=true NODE_946_length_15609_cov_38.1275 . exon 9407 14339 . - . ID=g8278.t1.exon2;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . CDS 9407 14339 . - 1 ID=cds.g8278.t1;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . exon 8738 9227 . - . ID=g8278.t1.exon3;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . CDS 8934 9227 . - 0 ID=cds.g8278.t1;Parent=g8278.t1 NODE_946_length_15609_cov_38.1275 . three_prime_UTR 8738 8933 . - . ID=g8278.t1.utr3p1;Parent=g8278.t1 #PROT g8278.t1 g8278 GVFLDQSHVEFGNTVVPVSPRSTSLSSSHADTIESTFDSSSGASHRDRRVTLRLRSVGRGWVTVQSVTCDAGVQCPLEFEITNGGGVPGTGAWTDVVSARLSHNALEGDHSGTFSIGTTDAKDPLLRVSYAARVLRGLLHCTFDSTHLLVDSLLSNHTLSRSLRCASTFTVPITLVSISVLNDAGGMLSLAERMRRGDTISSRRPASVALIRISEHAEAAMEASGVPLRGAFLVSTSVSDFVVPVTLYTGRLSVTVDGKAPPVEGGIINFGKMGAVEVRRRRIELHNPNPVPVRIMHYYSIHHSVPLFFEDVYDAGHAPMVRALLPTPRDWADSGPIYEGFDSPLYVLPRETAVFMIEASPGFAVELQGEIHFHTSTRVVGLSWVYEASRGSMEMLQPSVAVTFSSLLIHISMPVPARNLFQNGIRIVSHETDFSEFVEVVYNPNAVIRTIGTVMIAQLEFSLCGLQCDKLRDIATNAVTEPGARVSDAFVQLSRIWYNIETLFIKQLNADAIASGRREGLKGYRRGGIGLSQIHARGELTLHGDVSENYRVSIDVGVSVPRFAGAGMFDFPLTRVGSHSVHRIEIQNPSDVEMAVSLTSMSDWDYASIGPIVEALCVYGQTACFPHDDPSMFVPSENARRKTVIPPRKSVWLDVMFSPRHFGPNIGALFLRNPLSIVEMIPLVGIGALPVFALVTEMDSPHTFTELLFDLPREMARVDGAAAVVPGATISGLMGFFVRNVGNWMTIVHSVRIVASTPMHAHSACGHLTVTSDDPNMPLVDTTIVLLPGGELALNVDMSGVKIASRPTPTSECYLQFVTEELGQEAHTDIPVRLVTWSDAMHVAPAQQQQQQQQQQQQQHSRQFIPAASDMETPRPVIVPASPSLTSGGLGASAEIAPSSSSAAGLAVTLVACAFGGVAVFAAIRYRIVQAGIVLVNRGRRSTASQYASTPTASTTTTPFASHAASRDATVRALQQSDASSNNAYHVSSVTVADRTRHVTKSKRGKKHAAGSSSSSSSRRDIGHSHVISHSTHDGGVSGHVRSVPSSRQTSHEGSEENSRRNSTENVQQTNLAVDDDMDNATATATDTVALGAIPEVTSPVPVDAPSTAPITAPSTGIAPITPSVAGTDASAAIGASGDDGISLTADAIPEMASVLSVSASVEVSSVTGAGDLPSATVEEESASLHSVKLSTATSANAATAKGVKRSGSESANATTTTTTTKTTTANTNANSNAKTTPKKSAAAKKLGFPTAVGPFGVHGLVWDESEGAWVVKIPTAAEAAAVPVPEPAPTPADVAPPPPKASAKSGSTGPVAKKKGGLAAAASGNSGTRTVSKNSGGNMVGTASGVDNQQGPVRNAFVTDASFSTADSDDAVTVGESTATASDDTFSQKQSLDGRDGRQASSHKSQSPEEVGALSGASQTGVSRKKQQKKLLKQEEQQQRQQRQQEEHGSATYESGSGSVVSSQLSLSHDHAQHWPTPPPGLPFPIGVSLPPFAPGVVFPSEPVSLAPADDEDGELMPEWATATIATAATMTATLAGISAATTSAMGVSVDAPHHHNHVTGHGRGHYPVSLSLSGHSVHVPSVHASTVSSASTHTHTHTHAHMHHSSARRMPKGPSDVVDKHPGHVAGSIRTDPWARDAHVMGGGLHDADEHRHVASVSAWERRRAVAIAGASALQAGLPEPPSTDHPLSLSSGAFSSSGDEHMSSFFSFPIRQNASAGTNHNHNHNHNHNHNHSTHVGGHVSQQYQHPPQHGGQFSYGDPYQREDLPFDRKIVAPPQHWRNSAAVSGSASGGPWASALFFGGPQGILPWEMPPPSTQYPTAHTASHATSHVSRPLGLMGTSNGGAAPGPVVTHTLSGRHHAQPTPQYERDDRRGRQ* # PASA_UPDATE: g8275.t1, single gene model update, valid-1, status:[pasa:asmbl_10070,status:12], valid-1 NODE_946_length_15609_cov_38.1275 . gene 95 1004 . + . ID=g8275;Name=g8275.t1 NODE_946_length_15609_cov_38.1275 . mRNA 95 1004 . + . ID=g8275.t1;Parent=g8275;Name=g8275.t1 NODE_946_length_15609_cov_38.1275 . five_prime_UTR 95 95 . + . ID=g8275.t1.utr5p1;Parent=g8275.t1 NODE_946_length_15609_cov_38.1275 . exon 95 198 . + . ID=g8275.t1.exon1;Parent=g8275.t1 NODE_946_length_15609_cov_38.1275 . CDS 96 198 . + 0 ID=cds.g8275.t1;Parent=g8275.t1;5_prime_partial=true NODE_946_length_15609_cov_38.1275 . exon 488 1004 . + . ID=g8275.t1.exon2;Parent=g8275.t1 NODE_946_length_15609_cov_38.1275 . CDS 488 807 . + 2 ID=cds.g8275.t1;Parent=g8275.t1 NODE_946_length_15609_cov_38.1275 . three_prime_UTR 808 1004 . + . ID=g8275.t1.utr3p1;Parent=g8275.t1 #PROT g8275.t1 g8275 YPTHIVTGSAGCQEDLDYYDEVFYGPWSAFRSASYGYGHLKIVNATHLHWRQLLDEGNGGSDEIWIVKDAVPARSENDVVSDGFRDGCDHYCAAVCLSARDNNAAECSAVCRCDLIGEGEMRKRAATIRREMSRVGKRHA* # PASA_UPDATE: g8277.t1, single gene model update, valid-1, status:[pasa:asmbl_10072,status:3], valid-1 NODE_946_length_15609_cov_38.1275 . gene 5827 8465 . + . ID=g8277;Name=g8277.t1 NODE_946_length_15609_cov_38.1275 . mRNA 5827 8465 . + . ID=g8277.t1;Parent=g8277;Name=g8277.t1 NODE_946_length_15609_cov_38.1275 . five_prime_UTR 5827 6110 . + . ID=g8277.t1.utr5p1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . exon 5827 6161 . + . ID=g8277.t1.exon1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . CDS 6111 6161 . + 0 ID=cds.g8277.t1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . exon 6491 6556 . + . ID=g8277.t1.exon2;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . CDS 6491 6556 . + 0 ID=cds.g8277.t1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . exon 6928 7041 . + . ID=g8277.t1.exon3;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . CDS 6928 7041 . + 0 ID=cds.g8277.t1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . exon 7320 7483 . + . ID=g8277.t1.exon4;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . CDS 7320 7483 . + 0 ID=cds.g8277.t1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . exon 7873 8465 . + . ID=g8277.t1.exon5;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . CDS 7873 8068 . + 1 ID=cds.g8277.t1;Parent=g8277.t1 NODE_946_length_15609_cov_38.1275 . three_prime_UTR 8069 8465 . + . ID=g8277.t1.utr3p1;Parent=g8277.t1 #PROT g8277.t1 g8277 MVLRKKIVIIGDGACGKTCLLVVFKNGGWSEELARYVPTVFDNFVASLDVNGHSMDLLLWDTAGQDDYDRLRQLSYPDTDVVLVCYSVENPTSYTNVSEKWLPELQTFIPAVPRILVALKSDLRTDADVLARLKAENQEMITEAQGKELSSTISAVGFVECSSLLNENVTTVFHRAAMSTLGGTTTKKKKKGCALL* # PASA_UPDATE: g8276.t1, single gene model update, valid-1, status:[pasa:asmbl_10071,status:3], valid-1 NODE_946_length_15609_cov_38.1275 . gene 1843 5462 . + . ID=g8276;Name=g8276.t1 NODE_946_length_15609_cov_38.1275 . mRNA 1843 5462 . + . ID=g8276.t1;Parent=g8276;Name=g8276.t1 NODE_946_length_15609_cov_38.1275 . five_prime_UTR 1843 2135 . + . ID=g8276.t1.utr5p1;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . five_prime_UTR 2399 2410 . + . ID=g8276.t1.utr5p2;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . exon 1843 2135 . + . ID=g8276.t1.exon1;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . exon 2399 2474 . + . ID=g8276.t1.exon2;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . CDS 2411 2474 . + 0 ID=cds.g8276.t1;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . exon 2778 4314 . + . ID=g8276.t1.exon3;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . CDS 2778 4314 . + 2 ID=cds.g8276.t1;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . exon 4541 5462 . + . ID=g8276.t1.exon4;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . CDS 4541 4748 . + 1 ID=cds.g8276.t1;Parent=g8276.t1 NODE_946_length_15609_cov_38.1275 . three_prime_UTR 4749 5462 . + . ID=g8276.t1.utr3p1;Parent=g8276.t1 #PROT g8276.t1 g8276 MGDRRVLWAFVLLALATSSVAEDLWNIADFEEFFEGALRQARLADDFFGQTTATGTATATPDITNVYSTGHFFSSDFLSISQFTSDVTAVPSSTYVTSYEAASTDAPAPTDTSASTFVAEETSAVSARPSASHGESSEAPAPTEVSSFSVESLFTETQIPTDTPTFSASISEETQLPTATESPTLIVEPSLVDEVSSTEVPSSSAETSSASPKSSAETEGPSTQQREDASTSVGASESATEPASASASKVAISEAEETHSASSAPVVETHASPSHGTYTSVHVGGDSEKKTPTLTTATATASATVAKFVRPTSLSGFSAEQLAQAVRVSLRGIKAAAFKGSNIESAFKSEIAKAANKALSKLRRRGADITEEDIETPELFKGSDLERAFKVQAMRAANEAVVRSKRASSVVVTVDDIVILFYIDTSTGLDLVMLLAVYSADGTPIIISGDLLAGAINDSVAALAALGLDVAGVVLNPVDPNNPDGGSPGSPGGGSSGSSSSGSKVGIIAGAAAGGAALVGAAVVGTYLYRKKKNSGSYTLERIRVDPAATGEDVGTERKHSEHFRRASPEPVAETTSLPGVYVPPESEMHMATVADWNGELV* # ORIGINAL: g13278.t1 original gene structure, not modified by PASA NODE_686_length_19041_cov_42.8235 AUGUSTUS gene 80 3112 . - . ID=g13278;Name=g13278.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS mRNA 80 3112 . - . ID=g13278.t1;Parent=g13278;Name=g13278.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 80 3112 . - . ID=g13278.t1.exon1;Parent=g13278.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 80 3112 . - 0 ID=cds.g13278.t1;Parent=g13278.t1 #PROT g13278.t1 g13278 MADRRISSAVADGSTTSGPRKSSGGSPVVQRHSSSRPNSGRIRLQPILDEGKKEWVDSSARTIIHRMKETASCRVRIYVSSASGTEAEREYLSRRVFPELSQACERTGLIVTFIDLRNGHESDYPAFGDRTLAVRLAEVATADAFVGIYGQRYGWQPSEGPHSTCFQENHAHAVQSVPWLAEDAVSMKSATELDIVAREHLKMASGFAMPAAFFFRDAAYDDIQVARARELGRDGDCVFSPESAASKDRLDLLKNKIRTACVRQKSVSVQQQLQQPAVAMGASAISPGWLESSYADPAEGMQKISQTLRELLGAIAHLYGGGSFLGASAPPVIDHEQRAHDAFARSRAEMFVGRAATLEALTSAADSSGQGGRLLVVAAPGGSGRSSLLAKWILKQAERDRKRHLASSKYKSCVFYHFVGCSDPSLRPESLLRRLAITLATAVGPGDAMDGSSQQISTAEYVSQFALTLSADTRQLSERVSDLLAEAKENQINVSIAIDGLGYLDAANNARELNWLPHQWCGASTVVSVSSESQSVIQALTMDRPHEIFEPAELTRNEALAVCVAAVRSSVELIQKDKAGSSTGHALEILRDKLDAAAPHRQEGSTNRGLPLTALCCNILGRELVLSSTYWSISGSYLKGHSEGAHIAGSGYTSIDEKMRQLFTCDDAASLFEHVFQRAEKELTNTLAPCALHQVRRISASSTTGGAPGTPSASGDETNPFSGRLLSPGVSLKRTVGDRNILGEVLLCITLSRFGLTLNDLEGILEVDQAILLHVLQSLRGFLVENTVGLITFFHREMRFAAEQRYLHHKTAMTRCAGKMAEYFESLYKSSGSTGVNSSRAEEELVWVLFRVCDYDALAQSLWDIGRLARLMASDENLLVLCWRSTKKTPKEIAAEYMRLLQASIGKADGAPYAVVGRFMRSFGALEDALQFETSALEVDTARLGDKNAIVAARMFSLARLSHDLGRKDALKLFEKSLAINEKVLGAEPISIAASLRQIAALYVSEDKHDQ # PASA_UPDATE: g13282.t1, single gene model update, valid-1, status:[pasa:asmbl_8872,status:12], valid-1 NODE_686_length_19041_cov_42.8235 . gene 17550 18814 . - . ID=g13282;Name=g13282.t1 NODE_686_length_19041_cov_42.8235 . mRNA 17550 18814 . - . ID=g13282.t1;Parent=g13282;Name=g13282.t1 NODE_686_length_19041_cov_42.8235 . five_prime_UTR 18810 18814 . - . ID=g13282.t1.utr5p1;Parent=g13282.t1 NODE_686_length_19041_cov_42.8235 . exon 18693 18814 . - . ID=g13282.t1.exon1;Parent=g13282.t1 NODE_686_length_19041_cov_42.8235 . CDS 18693 18809 . - 0 ID=cds.g13282.t1;Parent=g13282.t1 NODE_686_length_19041_cov_42.8235 . exon 17550 18341 . - . ID=g13282.t1.exon2;Parent=g13282.t1 NODE_686_length_19041_cov_42.8235 . CDS 17631 18341 . - 0 ID=cds.g13282.t1;Parent=g13282.t1 NODE_686_length_19041_cov_42.8235 . three_prime_UTR 17550 17630 . - . ID=g13282.t1.utr3p1;Parent=g13282.t1 #PROT g13282.t1 g13282 MIELREAISKLQLESEYKFQADQTHMDQLRILLEDHTERLSNVELRLNSTGSGRAIVFIGWLLSYVLSVIALVAVIVSQLGRHGKALVVRLRTAFGPKQIAPPDSTSLFNGKSLARSRKPPSHRGEKWENGGDGGQSRRLNEQSRLSSEMGNTAVGDVGNVGAAPPIVEGIVASPAPDDQSPATTSTTSNSHVSNSVGEAARTLPPSVTSGLSPQTSIAYAAPVASVAPVAQQSAQIRSHALPPTQSQPQPPLSRSLFDMDSAESANDTDTSDGM* # ORIGINAL: g13280.t1 original gene structure, not modified by PASA NODE_686_length_19041_cov_42.8235 AUGUSTUS gene 12187 14137 . + . ID=g13280;Name=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS mRNA 12187 14137 . + . ID=g13280.t1;Parent=g13280;Name=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 12187 12276 . + . ID=g13280.t1.exon1;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 12187 12276 . + 0 ID=cds.g13280.t1;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 12426 12547 . + . ID=g13280.t1.exon2;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 12426 12547 . + 0 ID=cds.g13280.t1;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 13282 13737 . + . ID=g13280.t1.exon3;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 13282 13737 . + 1 ID=cds.g13280.t1;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 14026 14137 . + . ID=g13280.t1.exon4;Parent=g13280.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 14026 14137 . + 1 ID=cds.g13280.t1;Parent=g13280.t1 #PROT g13280.t1 g13280 MSAASATQRESVAIIGGGFAGLMLARSLRSTHDVTIVDRKDYFEYTPSVLRAFIHPEVAEAISIPYVELVRGPVGVELAAEIAEAMPHNASVSAHEKCSRRLMLATRHARLLPQLSSRVSTYATDALRRGGVEVLTGIYVRAVDRIDADELDTGLAGPQKERVMLGDTTLVADVVFWCVGTDVADSVGVRWNLLCRDESVADAPSHDTSGKAAESTMAAAQHSSSEGRLFVVGDASSGPLMEEKLAYTAELHARYLGGG* # ORIGINAL: g13279.t1 original gene structure, not modified by PASA NODE_686_length_19041_cov_42.8235 AUGUSTUS gene 4379 11461 . - . ID=g13279;Name=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS mRNA 4379 11461 . - . ID=g13279.t1;Parent=g13279;Name=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 11429 11461 . - . ID=g13279.t1.exon1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 11429 11461 . - 0 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 10855 11125 . - . ID=g13279.t1.exon2;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 10855 11125 . - 0 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 10226 10363 . - . ID=g13279.t1.exon3;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 10226 10363 . - 2 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 10003 10087 . - . ID=g13279.t1.exon4;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 10003 10087 . - 2 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 9569 9650 . - . ID=g13279.t1.exon5;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 9569 9650 . - 1 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 9353 9431 . - . ID=g13279.t1.exon6;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 9353 9431 . - 0 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 8923 9008 . - . ID=g13279.t1.exon7;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 8923 9008 . - 2 ID=cds.g13279.t1;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 4379 8689 . - . ID=g13279.t1.exon8;Parent=g13279.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 4379 8689 . - 0 ID=cds.g13279.t1;Parent=g13279.t1 #PROT g13279.t1 g13279 MESVEEAVAQKVLSAPGSGHPAQNGGASAPITSLSSPEFVNGTAFNSLLSAFGLGTRTLSRRVSLGPTHMGEAFFTRENYTKIITTLQDVGVEAARTITADDLIVTESFRPDTRQWHQANERRNAKIVLLLEGLMKAYGYPLHCKPPGVHEIQSLVETEIAVNGIEDVRAVNWVTSFSDGVLLLVLIHKFRPDVVPSVSNIAQRPPIENVTRAFSAAKTIGAALFVDAEDLVASRLRPHLVAAQVAVILCRLRCKDGKHHDSTYGHSAPAAASLSRRTSTSEPHGNGVVRRSSTVSDALNNNSPSLAGAWDRPFKGAPALAPRGPLNTSSNAPTNVSSPVRVPSTSLERRQSLNNSPFGGGGSSGSYTSAFVRRASTTTTYSPAIAGKPFEPIILERRQSQTAVPSTPNTPAAATEGKPETATLERRLSITSEPKSARRVRANSITEAAVAASPERPAPTSPWHRDEKIAPHPSSTSTTSTIGVRRASSVSLDPKPSFPSLGLDMYARADSVDSAEPPKTRGEAVTIERRASVDAPVRSAVRRPSVTGVHSVHTEAAHRVAVAVEDGMDSSVASPIMLPVHTDSVVEECEQPIAHTTHADDSVGTPKQVPVIAVEVKSASIQRRPSSSARKVHARRDSHTESAAPMMPTDTVQTPSSKLFCADSIDTRELPPLDRLSSDEEGEDVDSHWEEEKEDRVTPLHGDDVAQDLDGAFVAATADMHMASTEAEANHVASGNDVSAVIEALDAPVEREMDDHKEDSGYHLHFGPPPVLFGALVDEIAVAVAAEKRLVENASSDNSDLPPPTFEEERLRDGTDEPHLDVNAVNVYPSSDGMQDDNKAGEATMMPSSRAEDVEQEVHADPREEKQQQQQEQQHVDAVGDGDVQDDHMAVSVLVVTHSIDGERNNNAAQEVDVDQFEADKSATRGEKLIGSQTISAGDDSHANGVAFPLPPPPPAPEELQNNSVDSDNNNDNNNSVQVEGVPADDPSHHTKTGFIAIGNDIATDDDEEEEHFEAPPPVPAIETLIPDELPPPVPEPPPEEAEEEIVVDAVHSMVHCEDGVNNTANSGVVENGDSVRVHNETENVDIVSVLRDVDVRDAESVRPPTPPPPPPQEQEVGDGVAGQPAEYSQDAGLHSVPVIAVDAESSRHSGAPGLSIDDAPPVPPAPPSPMHETHSLPLEHDVHQADGSVVEDVEQQRMSLPPPPPVDGAVDYETQEQAECPPSPPPPPPPTLEQESAVAPPTSVQGATVEETAVESTFTAPSVDVEAHVVLSDYVPAAKDQHGQRIVSFQEPTDDTTLAALIEDDARTSSAKLSRRNSSPLMTSGGEGKDKDKDKDKKSSPARKNSGFFGSLLGTFKAPFAKEKEGREVEAPSGSSNNVSSGTLSPAANSAVHAGCVSLAVHEEAIKALEAQVARLTEDLAVNETRRTIDTEQLQRHRKQVADERDKYLVELAEGMREINKERERFDTNRLALEARAMELELRARELQEKEQHMSVVMHTEGGPAGTRSEDSERIRLAKERADWDELERAVMAATRLAWDRAEREKMASDRRAWDLEQRTSLMRTGATTPTGNGPAISQDDSANRAAMTAARITWDTAERGRLTAARAKWEESERAKLRRDLKDFDMRLRQSCAREMLLAEEEEHEVIERELARFEQVEKRRVADRIARFEAEERERVKAAIADELGLEVSEQ* # ORIGINAL: g13281.t1 original gene structure, not modified by PASA NODE_686_length_19041_cov_42.8235 AUGUSTUS gene 15359 16774 . - . ID=g13281;Name=g13281.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS mRNA 15359 16774 . - . ID=g13281.t1;Parent=g13281;Name=g13281.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 16193 16774 . - . ID=g13281.t1.exon1;Parent=g13281.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 16193 16774 . - 0 ID=cds.g13281.t1;Parent=g13281.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS exon 15359 15925 . - . ID=g13281.t1.exon2;Parent=g13281.t1 NODE_686_length_19041_cov_42.8235 AUGUSTUS CDS 15359 15925 . - 0 ID=cds.g13281.t1;Parent=g13281.t1 #PROT g13281.t1 g13281 MGSPRVALEFFRSVGRNKYHIEYDGYKSNHLRQALVALAGLGAPLGKLHEYALTYAKEHRLEAPRVDGPLEPPLTPKNWRERLLGKKTHYNELADLFLGMTKKYNGDTSRVLDEIYPQLCDGVGGAAFHGLIELGFGLHSPLGTTGEAVADGLAYLAYSHKRLLPVGYEPPQIEPTTAKASKDEVFKLFLRAQKNYESFSELFVKHLNAAPYATLPVSEFQKKMAIIGDHGSKALLDIVLPVEKQALGTKTLFAAAILAYAKTKPSDDFFLLHGVTSSWAFYTVHSQLSSHNSKHRAAIHYAAALAAAYICQGAPTINKARSWDIPHRVTTNTVIAAALRSKDEHTLKLVYCLVGPEAIKTGVGAGMLLRVAACKTGLAQWE* # ORIGINAL: g4958.t1 original gene structure, not modified by PASA NODE_6132_length_633_cov_31.4337 AUGUSTUS gene 186 391 . - . ID=g4958;Name=g4958.t1 NODE_6132_length_633_cov_31.4337 AUGUSTUS mRNA 186 391 . - . ID=g4958.t1;Parent=g4958;Name=g4958.t1 NODE_6132_length_633_cov_31.4337 AUGUSTUS exon 186 391 . - . ID=g4958.t1.exon1;Parent=g4958.t1 NODE_6132_length_633_cov_31.4337 AUGUSTUS CDS 186 391 . - 0 ID=cds.g4958.t1;Parent=g4958.t1 #PROT g4958.t1 g4958 MPSAAKGVAVVRVIDLKHASRTLLKGHVGSSIMDMAFGWPREDILATVDNMGALFVWRIEPVTDSDTL # ORIGINAL: g7585.t1 original gene structure, not modified by PASA NODE_4577_length_1440_cov_26.8974 AUGUSTUS gene 1046 1252 . - . ID=g7585;Name=g7585.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS mRNA 1046 1252 . - . ID=g7585.t1;Parent=g7585;Name=g7585.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS exon 1046 1252 . - . ID=g7585.t1.exon1;Parent=g7585.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS CDS 1046 1252 . - 0 ID=cds.g7585.t1;Parent=g7585.t1 #PROT g7585.t1 g7585 MHCAAQSVITIRRKSERLVREHRGPSTLIRINTDDADIETYGAHQVSLPLGALDGLTRIEQGLADTAS* # ORIGINAL: g7584.t1 original gene structure, not modified by PASA NODE_4577_length_1440_cov_26.8974 AUGUSTUS gene 77 448 . + . ID=g7584;Name=g7584.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS mRNA 77 448 . + . ID=g7584.t1;Parent=g7584;Name=g7584.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS exon 77 448 . + . ID=g7584.t1.exon1;Parent=g7584.t1 NODE_4577_length_1440_cov_26.8974 AUGUSTUS CDS 77 448 . + 0 ID=cds.g7584.t1;Parent=g7584.t1 #PROT g7584.t1 g7584 VLRYTGNYAGHTLPATAQAAQTASLLNRSMCFLKTNNAANAKKDAADVIDSASATAADRAKAHFRRAQAQLALNESDGAIADLTEALKLNPDDAGIKTELARARQKVVAAKQKEKETYARMFK* # ORIGINAL: g1419.t1 original gene structure, not modified by PASA NODE_402_length_24540_cov_41.5785 AUGUSTUS gene 9828 10877 . - . ID=g1419;Name=g1419.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS mRNA 9828 10877 . - . ID=g1419.t1;Parent=g1419;Name=g1419.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 9828 10877 . - . ID=g1419.t1.exon1;Parent=g1419.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 9828 10877 . - 0 ID=cds.g1419.t1;Parent=g1419.t1 #PROT g1419.t1 g1419 MTERIPARLSQSLTIGLVVLAYWIVSISMVFINKYLLSSPDIRLDAPLFITWYQCLVGAASLYVFGALSVKWPEYFSMFPKFEYRWDIALKTMPLSAIFVGMIAFNNICLKFVGISFYNVGRSLTTVFNVALTRIFLGQQTSFPAIVCCAVIVGGFVLGVKEEGGTGTSEITAGGVVAGVIASMFVALYSIFIKRVLPAVEGNEWRLSAYNNVNASLLFLPFMFLAGEVGEVYNYPGLLSTTFWNMMTVGGVFGVLIAVVTMMQIKHTSPLTHTVSATAKACAQTVLAVATNNEVKTMAWWTSNGMVLFGAAAYANVRHNEMQAAKATLPPPATQPTMPSERESSESKQ* # ORIGINAL: g1418.t1 original gene structure, not modified by PASA NODE_402_length_24540_cov_41.5785 AUGUSTUS gene 6633 7574 . - . ID=g1418;Name=g1418.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS mRNA 6633 7574 . - . ID=g1418.t1;Parent=g1418;Name=g1418.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 6633 7574 . - . ID=g1418.t1.exon1;Parent=g1418.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 6633 7574 . - 0 ID=cds.g1418.t1;Parent=g1418.t1 #PROT g1418.t1 g1418 MTASANASGYFASPLDLCAASLKQPLRSLPATPIVASDAPVRKAANDVALKRKGRAAVVQGDYAAKRCVVEGCKFMHRRRRDLFEHLEEQHRGDYPLYRCTLGDAGDLTEWIQQLEDDTFAKFVLISDEESVQGLRLVQYACACSGLYPEPNATGSLSDAANGNCECNLENAAPKKRRVNCIAHIIVDMPAVTATSDGTRNAGLVNVVYQPEHTGHTPMPDAIQHLPMYVTTRTDICRLLSMSVPVPDIVKWIRTHDDSYRAQLVNRQDVVNVKKSKFYEKYRSSAGVTDDVAAPEPMPKTPRPSPYSRPPML* # PASA_UPDATE: g1421.t1, single gene model update, valid-1, status:[pasa:asmbl_6876,status:12], valid-1 NODE_402_length_24540_cov_41.5785 . gene 21091 22162 . + . ID=g1421;Name=g1421.t1 NODE_402_length_24540_cov_41.5785 . mRNA 21091 22162 . + . ID=g1421.t1;Parent=g1421;Name=g1421.t1 NODE_402_length_24540_cov_41.5785 . five_prime_UTR 21091 21131 . + . ID=g1421.t1.utr5p1;Parent=g1421.t1 NODE_402_length_24540_cov_41.5785 . exon 21091 21218 . + . ID=g1421.t1.exon1;Parent=g1421.t1 NODE_402_length_24540_cov_41.5785 . CDS 21132 21218 . + 0 ID=cds.g1421.t1;Parent=g1421.t1 NODE_402_length_24540_cov_41.5785 . exon 21892 22162 . + . ID=g1421.t1.exon2;Parent=g1421.t1 NODE_402_length_24540_cov_41.5785 . CDS 21892 22014 . + 0 ID=cds.g1421.t1;Parent=g1421.t1 NODE_402_length_24540_cov_41.5785 . three_prime_UTR 22015 22162 . + . ID=g1421.t1.utr3p1;Parent=g1421.t1 #PROT g1421.t1 g1421 MDKAAKSGVKLARVTKVLGRTGSQGQATQVRVEFLDDTNRSIIRNVKGPVREGDILTLLETEREARRLR* # ORIGINAL: g1417.t1 original gene structure, not modified by PASA NODE_402_length_24540_cov_41.5785 AUGUSTUS gene 2331 3926 . - . ID=g1417;Name=g1417.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS mRNA 2331 3926 . - . ID=g1417.t1;Parent=g1417;Name=g1417.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 2331 3926 . - . ID=g1417.t1.exon1;Parent=g1417.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 2331 3926 . - 0 ID=cds.g1417.t1;Parent=g1417.t1 #PROT g1417.t1 g1417 MAPFSALVAGGRQSAESQTALNTAMQQSAAGNGSPLCESPQPSIDSHDCGDSSLPHSTPGTDGVDSVSHTAVHAIGLKSSIEGAPAALEKVANAPRKGSRSSKGRRPQGNGPVNAFILFSMHFRPTLRRHYPDEENAKLSIRLGNLWRILPRCAKLDYERAAKEQRLRCKASLAQPMQTLSPTTTPVHAQPDNVQAIESTLNCNASDTDTSSSVLSPVSHQSFPGVYDVLHSSTEGIDDGASTDGDYHMAVDPTNTPMLGVVDRQSHVHDTTHGHPSEQMMCLDNDYHRSTGVPAPLDDGFLAPFFDVTEISQVFGETAAHPPTESRVDDSHRSPRKSHRAQSSTGQLLGHSHHSGYWHDDGLPLRLPFRQHGQLRYPSHINSDSVRLRASLAAANSTLQRHAPAHVSDVASDSLSWNQSDASSSSTQPHSLPSTPWTQGASNVHIPDFPQLCIPPTALGPYTGLEEFAIAGTRSRALSSVGDMPTFPPVLSYDPYLWTPHLEISHDSVAPTASNSAQPTLPYWQMEVTLL* # PASA_UPDATE: g1416.t1, single gene model update, valid-1, status:[pasa:asmbl_6875,status:3], valid-1 NODE_402_length_24540_cov_41.5785 . gene 107 2133 . + . ID=g1416;Name=g1416.t1 NODE_402_length_24540_cov_41.5785 . mRNA 107 2133 . + . ID=g1416.t1;Parent=g1416;Name=g1416.t1 NODE_402_length_24540_cov_41.5785 . five_prime_UTR 107 159 . + . ID=g1416.t1.utr5p1;Parent=g1416.t1 NODE_402_length_24540_cov_41.5785 . exon 107 233 . + . ID=g1416.t1.exon1;Parent=g1416.t1 NODE_402_length_24540_cov_41.5785 . CDS 160 233 . + 0 ID=cds.g1416.t1;Parent=g1416.t1 NODE_402_length_24540_cov_41.5785 . exon 497 2133 . + . ID=g1416.t1.exon2;Parent=g1416.t1 NODE_402_length_24540_cov_41.5785 . CDS 497 2057 . + 1 ID=cds.g1416.t1;Parent=g1416.t1 NODE_402_length_24540_cov_41.5785 . three_prime_UTR 2058 2133 . + . ID=g1416.t1.utr3p1;Parent=g1416.t1 #PROT g1416.t1 g1416 MEDNGADRFAFADAIRNARPVDQDILAAGRWDGAFELAIPFLRQTLSHFPPIAEDAPSIACERYRRISPLFVTFRQSCRSHGLKSDKFDYDACVVRWLFLRKMDEYGMGGGDSSSDPIFPSPSAANHVDAGVMYDLQLKGVSALSARQVCLELARASNDALDKVNTFRKRREDWLRQKRDEGDTDDASWQTVKPPAKRHRDRSYASDGPANIMDHVTLEITDRRKESVVLSCDGIQFTMGRSQLEKLRRAYYETMQRRKNPAHSGVSGTVNTQRSSQGSDEAATEAQPFLSALFCLLARYETYHSWGYQAAVMDPVFDALGRDFGVSHECFASPLNSTLPSYSSAFSDVDTPFGSVGNFFRIREILSSAAGSPLRGCDPQRANGGPPGECGHTTIGGSFEANPPFIEEYMLAMALYMERWFLDLADRAPLSFVIFLPAWEDTPATTALSSSAYLRKRLVFEKLSHSYRHGAAHKSDDDRGSASVSVGYCRSFVFFLQNAPAAACWGLEGESRADGASGESERLRRFCKAFTSTGGSGRWTDPRH* # PASA_UPDATE: g1422.t1, single gene model update, valid-1, status:[pasa:asmbl_6877,status:12], valid-1 NODE_402_length_24540_cov_41.5785 . gene 22498 24074 . - . ID=g1422;Name=g1422.t1 NODE_402_length_24540_cov_41.5785 . mRNA 22498 24074 . - . ID=g1422.t1;Parent=g1422;Name=g1422.t1 NODE_402_length_24540_cov_41.5785 . five_prime_UTR 23886 24074 . - . ID=g1422.t1.utr5p1;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . exon 23788 24074 . - . ID=g1422.t1.exon1;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . CDS 23788 23885 . - 0 ID=cds.g1422.t1;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . exon 23165 23278 . - . ID=g1422.t1.exon2;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . CDS 23165 23278 . - 1 ID=cds.g1422.t1;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . exon 22498 22580 . - . ID=g1422.t1.exon3;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . CDS 22514 22580 . - 1 ID=cds.g1422.t1;Parent=g1422.t1 NODE_402_length_24540_cov_41.5785 . three_prime_UTR 22498 22513 . - . ID=g1422.t1.utr3p1;Parent=g1422.t1 #PROT g1422.t1 g1422 MSSREALLSNARNELLQIESWLDRDSKLGPGSKQRLTDAKRKQLTSRRNQLQLALAEYDVAVQKTKRRTTIMAVVLFGLALSVYFFRQYIRL* # ORIGINAL: g1420.t1 original gene structure, not modified by PASA NODE_402_length_24540_cov_41.5785 AUGUSTUS gene 11950 19820 . - . ID=g1420;Name=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS mRNA 11950 19820 . - . ID=g1420.t1;Parent=g1420;Name=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 19594 19820 . - . ID=g1420.t1.exon1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 19594 19820 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 19352 19419 . - . ID=g1420.t1.exon2;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 19352 19419 . - 1 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 18723 18868 . - . ID=g1420.t1.exon3;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 18723 18868 . - 2 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 18214 18455 . - . ID=g1420.t1.exon4;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 18214 18455 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 18000 18092 . - . ID=g1420.t1.exon5;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 18000 18092 . - 1 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 17486 17618 . - . ID=g1420.t1.exon6;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 17486 17618 . - 1 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 16913 17032 . - . ID=g1420.t1.exon7;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 16913 17032 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 16394 16624 . - . ID=g1420.t1.exon8;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 16394 16624 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 15956 16102 . - . ID=g1420.t1.exon9;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 15956 16102 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 15498 15656 . - . ID=g1420.t1.exon10;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 15498 15656 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 14742 14936 . - . ID=g1420.t1.exon11;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 14742 14936 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 14477 14590 . - . ID=g1420.t1.exon12;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 14477 14590 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 14004 14158 . - . ID=g1420.t1.exon13;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 14004 14158 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 13598 13712 . - . ID=g1420.t1.exon14;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 13598 13712 . - 1 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 13294 13394 . - . ID=g1420.t1.exon15;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 13294 13394 . - 0 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 12756 12910 . - . ID=g1420.t1.exon16;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 12756 12910 . - 1 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 12236 12361 . - . ID=g1420.t1.exon17;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 12236 12361 . - 2 ID=cds.g1420.t1;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS exon 11950 11978 . - . ID=g1420.t1.exon18;Parent=g1420.t1 NODE_402_length_24540_cov_41.5785 AUGUSTUS CDS 11950 11978 . - 2 ID=cds.g1420.t1;Parent=g1420.t1 #PROT g1420.t1 g1420 MAAIPGIEIDDMNDQSNEGTDMDLFSWDGEAEGDGDTGLETSEDLLSTGEKIAKYARSEHVLQRLFIAKDLSEIARSMPFEECVAAILPVLGDLINDAEAVVRQTLCDQIPRLAIHFEREGGAIGHAHIVSTLAPHVLHLLEDLVEAVRGSAHEATLALFGQGILSDEEIENVFCPAILRLARNDAEDEHRMEAVSIISRASLILPPRVVQGQFVSEFCNLTDDQIFRVRKACASCIGAVGRAIGPEMSAQRLLPQYVRLAKDEIWGVRKACAESLAEMAASVTREVRSRDLVDLFKALSEDQSKWVKTSAFISLGPFIATFAIADDVNDQESQVGNEDEAYKDADTSVSSISSATESASIGSASGEGLSITIPSSPSPSPLSVLTSSPSSTSLSAVPLSPRNGSPDVPSSSPRRSSLTKDDAALSFAASHSAPEKEDLNEFSSFNYWRQPMPSVTFNMDSATPASHAKALSASEDTEMGVSSHEEKKPVPHVTTEDVEGISQGVEDLKVEESATTADETAEQNVVPRRLLDTFLSMSEPSFIRPPDCDTPYYCAFNLPAVLLTVGRDGWATIRKVYLQLCGDGQWKVRKTLAHSLHVIAGLIGQSAAEEDLLSVFEAFLKDMDQVRIGVVSHLAEFLHVIGTEKRCMYIPFVGELARTENEHNWRYRRILSKQLGHLCALFPMDLCYTHIFPFLMLLASDKVACVRAAAHTSLGLFVESIGASEEYQLKVARSIAELAKSEGCMPRLNFVRILRHVVVPTLHSTFNLVYLVELLRLAKDPVANVRIAVARLCARTLIPNDALSADGCDIIVSMEDDRDRDVLSYVTNTQAAGEESSDEWATDDESSKQMF* # ORIGINAL: g2566.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 6239 7030 . + . ID=g2566;Name=g2566.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 6239 7030 . + . ID=g2566.t1;Parent=g2566;Name=g2566.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 6239 7030 . + . ID=g2566.t1.exon1;Parent=g2566.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 6239 7030 . + 0 ID=cds.g2566.t1;Parent=g2566.t1 #PROT g2566.t1 g2566 MKLLLVFLAAVSAVNALGKLGHQIVATLAWNQLDDHSRERLWASKTFPENETLASVASWADRADAPSYTRPWHYADAPAWACRYEANEQPNIVNMLPKFVEQWQNESDAEAAKYVVHFAGDLHQPMHFGFEEDRGGNLISGLFLGTSANLHYVWDVLVVNERLSHFGHDVDAYVKFLAGFRRTTVVDSRTDSRTSDFAFSTGGLVDSIITAADISASLACKYGYSFVQSGHFVIDEFHLNDMFDVLDQQIVDAGAFAFAALQS* # ORIGINAL: g2569.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 10522 11256 . + . ID=g2569;Name=g2569.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 10522 11256 . + . ID=g2569.t1;Parent=g2569;Name=g2569.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 10522 10593 . + . ID=g2569.t1.exon1;Parent=g2569.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 10522 10593 . + 0 ID=cds.g2569.t1;Parent=g2569.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 10797 11256 . + . ID=g2569.t1.exon2;Parent=g2569.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 10797 11256 . + 0 ID=cds.g2569.t1;Parent=g2569.t1 #PROT g2569.t1 g2569 MYSSSLLVRNNALQLRFRAISSLRNKSPPQNKSPSQNKSPPQNKSPPQNKSSPQNKNPSKIKSPPKIKSPPKIKSPPKIKSPPQNKSPPQNKSPPQNNSPPQNKSSSQNKNPSKIKSPQGNKSPPKIKSPQGNKSPPKIKSPPKIKSPPKIKSPPKIRSPPKIRSPQGNESPPKIRS # ORIGINAL: g2565.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 3572 5140 . - . ID=g2565;Name=g2565.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 3572 5140 . - . ID=g2565.t1;Parent=g2565;Name=g2565.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 3572 5140 . - . ID=g2565.t1.exon1;Parent=g2565.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 3572 5140 . - 0 ID=cds.g2565.t1;Parent=g2565.t1 #PROT g2565.t1 g2565 MLKQADVFIADITTPSTGTGFMAAKAIGLGIPVLCLYDQTVQGKPSAMIGGCGKVTTKGYSDLAGFKRHVKTFLAPKYAPHPVCILLSGPAGSGKSTVGRRLADEFGLEFVSTGDLLRQLPQDSATAAIVRPYIEAGATIPSNVMTEILRDRLAAPDCQTFGFVLDGYPPTMKDLDELRRLEPLLIFCFECSDATAILRQCGRGERTTDTPLLAKVRLETYHTFIPKFVKYGYAWFPRTPVVRIDAERSLDDVWETVRSTVTAWTNIKTDSSFFPVAGTPQSTRFHFHIDAESIHELMELCKHIYAQHQAAQGQIKIYPIVALSLGVQTKQLGLYKQMMNFHTIENSESEAFVTGRLGSFDEEARQLFDCTLAAAQLVGKPIMVELEEYIGEWTYTRAAGFEVQSLYKTASDIDLKVGRYKHARLAHMPLELHLGFDLSKNGSVPPISVDWLNNECANRGMANGGWFIFANETKWCYRSNEFSDDSVENAQTKLFEQADSLSEIVDDTIMLSLEIVHGIWQF* # ORIGINAL: g2564.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 491 2254 . - . ID=g2564;Name=g2564.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 491 2254 . - . ID=g2564.t1;Parent=g2564;Name=g2564.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 491 2254 . - . ID=g2564.t1.exon1;Parent=g2564.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 491 2254 . - 0 ID=cds.g2564.t1;Parent=g2564.t1 #PROT g2564.t1 g2564 MAQQTVSSALNAIQANEPNRTGKVRRVVFAITNNPHKVAEYHSFFANYGLEVIHMLIDDGKDLSLEEYAESLLRVQTENVVIVAAFRETSDLVDGQNISEMLAWWQTSSGVKTNRRYVHRTAGYVDTNRKASDADNESPCSVDVFGWDDIFVVSALGKTYQELRNEGRAKVSSREMVLSAFAADRLHYHCPRDLKFRPQHYERAVCLDRDPADLAVRLMEFAPLGFRNLVTTVLNSGIFFRAAKNRRQANYWQPGLNAGLPFTPKSDDIHELTFMAHDFGHFLIRDLIFTGEEHPFSKQVYVAHRMISEAVTMVLADMYLVGHLAKYDTCGYDFSKRKIYPLCVDLGVVPIERILWANVKMMLLGDPTEYLAMLEANDKSRINLDAFLEKYEPFFIEDYRWTIQNFDNMCKRKTMIRKWYEDGRIVRNASNISFETIECFVEEMGGVTAETPEQLVWTVFQTVLSRDILPVLNETPIPLLPLEERQRRALFRYAVGQLGIFAEHADAPMTDEYQQALINCLCNEGDAREFRHIYELYLGKLCACNLISEDDRATFAEVYPMYPPFYVSYDLGGQRVPSDPSVWFNPQ* # ORIGINAL: g2568.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 8509 8973 . - . ID=g2568;Name=g2568.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 8509 8973 . - . ID=g2568.t1;Parent=g2568;Name=g2568.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 8509 8973 . - . ID=g2568.t1.exon1;Parent=g2568.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 8509 8973 . - 0 ID=cds.g2568.t1;Parent=g2568.t1 #PROT g2568.t1 g2568 MHFIIPCRMALYVGRPTGTFTLSAFFISGRGILSTPDDPTMLLERITGLPPATLNIHDDYLHVVSNATDTTLDHILATFIENVGNEVKWIHENAFHLMADGHITLLDALNVIKNKPSDYFSDETCVHYFSFTSIVRALIENPLCVKGHVSDGAI* # ORIGINAL: g2567.t1 original gene structure, not modified by PASA NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS gene 7412 8044 . - . ID=g2567;Name=g2567.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS mRNA 7412 8044 . - . ID=g2567.t1;Parent=g2567;Name=g2567.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS exon 7412 8044 . - . ID=g2567.t1.exon1;Parent=g2567.t1 NODE_1443_length_11256_cov_21.3185_potentialcontaminant AUGUSTUS CDS 7412 8044 . - 0 ID=cds.g2567.t1;Parent=g2567.t1 #PROT g2567.t1 g2567 MDQLSPAVLVMCGSFNPITNAHLQCMELARDFIKESRKRSPIGILSPVHDSYGKPGLVPWEHRFEMCCRAVESNPWITVSPYEGEQTGWLPTLDVLRHVQEENKDCPVYFVCGQDVIQSFPTGCWSATDLMHILTEFPILCVARQATTITDVQQLISAYRSVGGNIELIINPIPNTISSTAVRNQLSFGRSVRYVIPCEVANYIYDNNLF* # PASA_UPDATE: g12407.t1, single gene model update, valid-1, status:[pasa:asmbl_4121,status:12], valid-1 NODE_2355_length_6598_cov_42.0156 . gene 220 921 . - . ID=g12407;Name=g12407.t1 NODE_2355_length_6598_cov_42.0156 . mRNA 220 921 . - . ID=g12407.t1;Parent=g12407;Name=g12407.t1 NODE_2355_length_6598_cov_42.0156 . five_prime_UTR 882 921 . - . ID=g12407.t1.utr5p1;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . exon 706 921 . - . ID=g12407.t1.exon1;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . CDS 706 881 . - 0 ID=cds.g12407.t1;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . exon 536 584 . - . ID=g12407.t1.exon2;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . CDS 536 584 . - 1 ID=cds.g12407.t1;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . exon 220 360 . - . ID=g12407.t1.exon3;Parent=g12407.t1 NODE_2355_length_6598_cov_42.0156 . CDS 220 360 . - 0 ID=cds.g12407.t1;Parent=g12407.t1;3_prime_partial=true #PROT g12407.t1 g12407 MERKISRSGLQREGSTSSLPSNPIAQQTQPQNLKVKLEQFKKFRQQEEEDLAKAQRIIDLYDNAFDAPDVEGAEQRKTSCKKKILVWDAEIQKITQQLQDMGVDLDEEDDGSSEDDTPIEKM # ORIGINAL: g12409.t1 original gene structure, not modified by PASA NODE_2355_length_6598_cov_42.0156 AUGUSTUS gene 3041 4150 . - . ID=g12409;Name=g12409.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS mRNA 3041 4150 . - . ID=g12409.t1;Parent=g12409;Name=g12409.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS exon 3041 4150 . - . ID=g12409.t1.exon1;Parent=g12409.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS CDS 3041 4150 . - 0 ID=cds.g12409.t1;Parent=g12409.t1 #PROT g12409.t1 g12409 MAEGGQVAASLAVIPGLEPPPRPRFVFPSARNNIPRVQEKSPGELLIMGAVQSITDQHFFTETDALFNTFLEQQPASFPPAGSPGLGVLLKVMRDDLYIKRLEVMYRYVLTDARTAPLFAPCIRTGMVDGTSTRALEIVFVRGTKFWALMTGEQPMLRLVVFGTLAFKLVVYGEIAQEGTVDSLQRLNELIHLLPTPPERVCRGLRTNFPDVVKAHLRDIANGRYVQGPCGELYRAEKCEWFATERSYGDSACERCVAARKTLIQKAKRHERVANDPTVQMQRAAATSKTPMESLTPDELKMRLKSASALIQKLRRKAAEKTAEKAAEKAGKIEKAAKTDMRAELRKTKKAAQAALRAAEALQAAMEKS* # ORIGINAL: g12410.t1 original gene structure, not modified by PASA NODE_2355_length_6598_cov_42.0156 AUGUSTUS gene 5332 6441 . - . ID=g12410;Name=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS mRNA 5332 6441 . - . ID=g12410.t1;Parent=g12410;Name=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS exon 6333 6441 . - . ID=g12410.t1.exon1;Parent=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS CDS 6333 6441 . - 0 ID=cds.g12410.t1;Parent=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS exon 6095 6141 . - . ID=g12410.t1.exon2;Parent=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS CDS 6095 6141 . - 2 ID=cds.g12410.t1;Parent=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS exon 5332 5745 . - . ID=g12410.t1.exon3;Parent=g12410.t1 NODE_2355_length_6598_cov_42.0156 AUGUSTUS CDS 5332 5745 . - 0 ID=cds.g12410.t1;Parent=g12410.t1 #PROT g12410.t1 g12410 MRIKQASDVWSFGIVMWEVFARGAKPYPGVENHAVAAYLAQNKRMGPPKDCPAPVHSIMESCWRKHPETRPQFSQLGIELRRAMSGLSGMAGGGGGEYASVGVGVGVSVSASAVDRRVDSVTTGPPGSYAMLVPESGYMETAKEEDQDAYLETVKGVDERHAYVETVASLGTTYLETVAAMEECGHVDV* # PASA_UPDATE: g12408.t1, single gene model update, valid-1, status:[pasa:asmbl_4120,status:3], valid-1 NODE_2355_length_6598_cov_42.0156 . gene 1578 2755 . + . ID=g12408;Name=g12408.t1 NODE_2355_length_6598_cov_42.0156 . mRNA 1578 2755 . + . ID=g12408.t1;Parent=g12408;Name=g12408.t1 NODE_2355_length_6598_cov_42.0156 . five_prime_UTR 1578 1719 . + . ID=g12408.t1.utr5p1;Parent=g12408.t1 NODE_2355_length_6598_cov_42.0156 . exon 1578 2755 . + . ID=g12408.t1.exon1;Parent=g12408.t1 NODE_2355_length_6598_cov_42.0156 . CDS 1720 2379 . + 0 ID=cds.g12408.t1;Parent=g12408.t1 NODE_2355_length_6598_cov_42.0156 . three_prime_UTR 2380 2755 . + . ID=g12408.t1.utr3p1;Parent=g12408.t1 #PROT g12408.t1 g12408 MVTAMGSCLSKCSSRRTVQNIAIIFVSTLVVLAFAFAALRLFMSEGEFKRLLTAKCYTDERVRDEVRRKVVLIAQEYERHNITYWLDYGTALGAWRERDMIAWDHNADLSFFGKDRDRALELAYEVVTRNNLPRNRRIDLFAWELGPDGLLHRSDGVNSVVFGAATDSFDPSFVTTTTPCSFAGADLQCPNRLAEFVRLRYPYTYDKKVPYKARCLRLW* # ORIGINAL: g2291.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 17714 18019 . - . ID=g2291;Name=g2291.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 17714 18019 . - . ID=g2291.t1;Parent=g2291;Name=g2291.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 17714 18019 . - . ID=g2291.t1.exon1;Parent=g2291.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 17714 18019 . - 0 ID=cds.g2291.t1;Parent=g2291.t1 #PROT g2291.t1 g2291 MSKENGGDSEGWGVVEKKAKQSRPKQQPKFNAYLHDFPSKKWDADSYKPIGQVSGLTIEDMPAFAVRPMSKNEYDIPNAIIAKVQKAVQHLHFAHRRSPLR* # ORIGINAL: g2295.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 31156 32763 . - . ID=g2295;Name=g2295.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 31156 32763 . - . ID=g2295.t1;Parent=g2295;Name=g2295.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 31156 32763 . - . ID=g2295.t1.exon1;Parent=g2295.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 31156 32763 . - 0 ID=cds.g2295.t1;Parent=g2295.t1 #PROT g2295.t1 g2295 MSNPAATAATPSAPVPDHVHYGDMDVTKVFGSVKELKPETANYSRAVVFTERMKIAFTGCRLKGTPKGLEVVFDPSTEEGKAIIETCNGIRRQIAAVVLNNKEAKQVLVTKTGLPIEMPDEELLECLMENQLNKCLYTISKDGKKGYIKTRAYNARGAAAADNPTDSPAGDAAVASNKRTDVKTNCSFYQLMDVRINEAGEEVAVEVINYETMTQERIDALHHVEIPGGLSVDEMTQRIVMGSYGHIAAGVNYANILGDGTMSCFPILDQVSFIPGTGSPNLNIPFSDDPEENCGYSYWHDVSMGEITHGDPFTKPREVVDDKGNRSTVEMKYITVNGGDGGRHNYLVRNCKLRFVSHDKVLGITKCALEVPNDLPFAKFEEDFHDCNLTLVAGNAEIAKNLLSANDMKKSIKERVKSMRLYSKMYRVPCSRTNKDGKAVPAKIPSTKIEWGKGLFVAKDPAGNPIKIDAGNVDAILCESRPMDVMLSNTFQVNMTKKSTQYSTRIDYARIDITAPVSSGFGRSAYAFAPRLPKK* # ORIGINAL: g2294.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 24541 25533 . - . ID=g2294;Name=g2294.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 24541 25533 . - . ID=g2294.t1;Parent=g2294;Name=g2294.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 24541 25533 . - . ID=g2294.t1.exon1;Parent=g2294.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 24541 25533 . - 0 ID=cds.g2294.t1;Parent=g2294.t1 #PROT g2294.t1 g2294 MSATNTATATAAALKVFRTAFDLYADELNESIVKEFPDKKAHDINAVKRTRWAALSKEEQEEYKTRNQERKKVAADAAPAPAPAPAVVVAPAVAPAPAAIAAPAPAVAAAPAAVAAPAGGIPAAPKRPLVSYFRFQSDVRKSFVESNPTIAPKDVMKALGEKWNAMTEEEKKPYTVAYHEDKEKHDANLAEYRRAYPDAPMATRKPSKKAVEKAAAAAAALAAAIAVAVAAAVAAPTAAPAKVKKPKVKKEKDPNAPKRPLTMYFRFLEDKRAEVKNSLTEGVKLKDKLKEMWAGLSEGEKAEYKAQTDVEMAEYKTELAEYKKTRTVTA* # ORIGINAL: g2289.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 13415 14397 . - . ID=g2289;Name=g2289.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 13415 14397 . - . ID=g2289.t1;Parent=g2289;Name=g2289.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 14246 14397 . - . ID=g2289.t1.exon1;Parent=g2289.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 14246 14397 . - 0 ID=cds.g2289.t1;Parent=g2289.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 13415 13895 . - . ID=g2289.t1.exon2;Parent=g2289.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 13415 13895 . - 1 ID=cds.g2289.t1;Parent=g2289.t1 #PROT g2289.t1 g2289 MKVPTDKSEGIVNRVSQAAAMDLLESAEDILQAVVTNVHRMLVYRGAIPESALERAITDNVTGSVCITITNKDKFTEEYVAALVPVVKNLQAVSHSMTLLAAGIESVNTSSLPGELGGLLQLGDSFSAINLDRIKAELVLVAVRAGCRHRPTVLELTLRVAFIWDSKIIQKDDVTRSLCPAAPCLFLPVNNTPHYDGNANQGDAFLPVAI* # ORIGINAL: g2297.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 38984 39805 . - . ID=g2297;Name=g2297.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 38984 39805 . - . ID=g2297.t1;Parent=g2297;Name=g2297.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 38984 39805 . - . ID=g2297.t1.exon1;Parent=g2297.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 38984 39805 . - 0 ID=cds.g2297.t1;Parent=g2297.t1 #PROT g2297.t1 g2297 MGRILDIKLANPELIKVLVDVLKELVVDLNLTFKPSGIEFSEVDQGGSHAVFCTLHADKFAEYKCVPKEGMSQIVLALGLFNLQKITKTIKAKYTLYIYMEESDENQMYFKIVPEKSNNPVIMKIPIQDWAGQQGLPEILETAFQKIVKVPTSAFQEQVRNMLNITATKVEFQCTDDQLVMACNGEVISQDSVFEDDTSIITNSTEDEDDPPIVQGVFPLKTIAICSKCSSMCPQVTIFLRNDVPMMLEYNVGALGTLRFIITPYTEPVAEPP* # ORIGINAL: g2293.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 22752 23252 . - . ID=g2293;Name=g2293.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 22752 23252 . - . ID=g2293.t1;Parent=g2293;Name=g2293.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 22752 23252 . - . ID=g2293.t1.exon1;Parent=g2293.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 22752 23252 . - 0 ID=cds.g2293.t1;Parent=g2293.t1 #PROT g2293.t1 g2293 MNQMLRQLDAIQVAEPPRIEGLMGTISRDYGQLTEACTTTTALDLTATTLDSALDPTTKAHDTAIEPTTETHDSAATSYAAAEMLVSLAELAAPAPGTEQTRTQTYCNEGRPKSKLVKDLMRHVTALSPLDQLALVPWESIAARSIGRSVLVKIQTTTVPSRGRDW* # ORIGINAL: g2292.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 20602 21033 . - . ID=g2292;Name=g2292.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 20602 21033 . - . ID=g2292.t1;Parent=g2292;Name=g2292.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 20602 21033 . - . ID=g2292.t1.exon1;Parent=g2292.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 20602 21033 . - 0 ID=cds.g2292.t1;Parent=g2292.t1 #PROT g2292.t1 g2292 MHSAVAPDEWVFAFVSQASTPTPFDTERYRALLTVIKLVYEHRTYRNAVISWATSETDARADNVFAGFGYSCARHGTGNDDSKHRWTLWWDPAASTADAQQCGIFDASCVPPEFKRFSCEIQQRLCDEFPGVLYSTVTELSHL* # ORIGINAL: g2290.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 14665 16245 . - . ID=g2290;Name=g2290.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 14665 16245 . - . ID=g2290.t1;Parent=g2290;Name=g2290.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 14665 16245 . - . ID=g2290.t1.exon1;Parent=g2290.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 14665 16245 . - 0 ID=cds.g2290.t1;Parent=g2290.t1 #PROT g2290.t1 g2290 MEAIETYLNERRRSYAEFVSVECHISRRFLEEFFRLGESNETSNRCFPILLSTVAQWLNEDEQELKKRLKHLPPGMFRKQPDKNKGGGGCMMSPTCAKFLCVRSETPRGELARKYFVAAESTLEKYRNYVVESLKGEIAAQNDGKKPKLQRGRIVVFSTGDFERGRSIVKAIQEKELSVGQGKRRGATLLYSVDVSDVNEVLKCVRKLLDGRAVQKSKNVFQVTLDEVKAAIYSCDGVRACVRSVKQMGSTCKSASANLYLVVERDSAGTVAQLLDAEMDFTTFLRTFSSQSEGFIDKYLELEKHKAKSHLYPVSVGLLAEWSGLPASVIRRRIAEFELNTRVGEAEERMSLEDAKMIALTATGSFADQVVLYFIEMENLLRKYRDLVLLSLENRLKEVTEPGSPRAAGPVKSVYAFWCDDNKMLAKIGKASDLRKQMQLHAEGKGGPVKVFYRLDVDSVEVEKFARIFLENYELGHHVYHVDEQIAKVVLDSCADMLAGVHATVFSDVGSKAKADAGNMYMVIAT* # ORIGINAL: g2296.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 34325 35605 . + . ID=g2296;Name=g2296.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 34325 35605 . + . ID=g2296.t1;Parent=g2296;Name=g2296.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 34325 35605 . + . ID=g2296.t1.exon1;Parent=g2296.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 34325 35605 . + 0 ID=cds.g2296.t1;Parent=g2296.t1 #PROT g2296.t1 g2296 MSSRAVKDVSLLLDLSEEVLIHIIKLGRFTLTDVGHLRASCKRVCGFLYRIRDTVLNEYVVGNLSKYVPYWSWTFDRAAANGHLEVIELLREDEVKRGRLDMRCTGKAVQSAIERGDWSVFVFLVRNKKELSVPQEHFYVPSREDEYPWTNLSDEQVQFLLCEAPLFLDGLAAIDAINGPINRGNVDLVSKLLPYIHDDFIRSALLDAFLRICETPAVFEVVLAECRRRKRKERELAIAVLFKAVAQRCCGAAMLDMALRYFSFSLGSLTAKERKSLTTDVPDVAVMSRLRELGLKRTVVNQWTEDLVFSVETECATIDKVKALVSCLLREDYVAAEFVANRCRADWTSVSRVIVEKGSLDAIKWLHARGRLDTTPDFLLGRHTLTPERVDFVWPLAQTGIPHDDGDTVARLVTTQWFDVAIERAT* # ORIGINAL: g2286.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 69 1229 . + . ID=g2286;Name=g2286.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 69 1229 . + . ID=g2286.t1;Parent=g2286;Name=g2286.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 69 1229 . + . ID=g2286.t1.exon1;Parent=g2286.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 69 1229 . + 0 ID=cds.g2286.t1;Parent=g2286.t1 #PROT g2286.t1 g2286 MLELTNLYMYGRGVEQNLIEAGVWLTARNTVEVRNDVCVADGIAKNAVSVTENAVANTETAVANTENAVADTENAGSVTENAVASENEGGVTNAGVAKKAVEPNYAEFQWESNRAELDLEIEACELYGVYRALAEQASPAIAAKIVNSRLCRVYLKMISAENANGIVHVARAITCTVINELANLCQIDLPPNDFPRKLSELGSQYGKEVTETSTFVSVTQKLMNDTEAAKGRQNKVRAMMAVYNFQTKVVGEMKKHSKFMETVQAKLDEFFIKETQLAFVVFSELLNLRVDYTQWTGTPTFNGKSDAKTARLLAFRAAQMVKPSLSDEDMHAFATKHANEFKRIDDIDICTCSNNTLVNVVTWLRKHYGKTSAVAVLEMLDLMHLA* # ORIGINAL: g2288.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 5359 5691 . - . ID=g2288;Name=g2288.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 5359 5691 . - . ID=g2288.t1;Parent=g2288;Name=g2288.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 5359 5691 . - . ID=g2288.t1.exon1;Parent=g2288.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 5359 5691 . - 0 ID=cds.g2288.t1;Parent=g2288.t1 #PROT g2288.t1 g2288 MIKTDSLMVSKTVLGKGILIKMDSLLCSKTVLRKERMIKTESLMFSRTLVAQGQIDQDGQCVVLDGCVVGQDRLIKTDSLVCSKTVLRKERMIKADSLMVSKAVLGARTE* # ORIGINAL: g2287.t1 original gene structure, not modified by PASA NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS gene 1489 3055 . - . ID=g2287;Name=g2287.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS mRNA 1489 3055 . - . ID=g2287.t1;Parent=g2287;Name=g2287.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 2822 3055 . - . ID=g2287.t1.exon1;Parent=g2287.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 2822 3055 . - 0 ID=cds.g2287.t1;Parent=g2287.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS exon 1489 2646 . - . ID=g2287.t1.exon2;Parent=g2287.t1 NODE_92_length_41641_cov_23.0854_potentialcontaminant AUGUSTUS CDS 1489 2646 . - 0 ID=cds.g2287.t1;Parent=g2287.t1 #PROT g2287.t1 g2287 MYLNATPLNAILTELLKGDILGKYLKNSMYSRVALQSKTVIVECFSAVDPLIVGGVPSGRQISLSLLEWERVCMKDDKAKETLRLYRPTNGPIEVVPGLFITRTSTELTELTLTLDVTVRIQCATDAEIAEALSGGAVGHSTPMFAVCQHEGGSSGLLLTVLARLLDRITLLVAASCVDAIVFEQLHIPYGRARVHLEIIAEKMAPLFPAIAHFVFRGVRCPRDMWEGMRALHASLDPTMRVWMSIWRECDVLAVEMPPNGHALKWRDIQDKYDYASGITPLPIFEDRSLFLGSIGNVTPFELTHHGVGRAVSILGENNVEEIEDVHCAQQELPNIKFLLETNLCDDGRTGLHLFEKVCKFIEKGHAAGERVFVHCALGVSRSPSFIMAYLVYKHVPVWVALDFLKTYRDVWISGGLLFDLLRWEERCLGMRATIHPAADLPDHVRLSDRLSVSAAHHGAVQI* # PASA_UPDATE: g2971.t1, single gene model update, valid-1, status:[pasa:asmbl_7844,status:12], valid-1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . gene 256 908 . + . ID=g2971;Name=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . mRNA 256 908 . + . ID=g2971.t1;Parent=g2971;Name=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . five_prime_UTR 256 272 . + . ID=g2971.t1.utr5p1;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . exon 256 358 . + . ID=g2971.t1.exon1;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . CDS 273 358 . + 0 ID=cds.g2971.t1;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . exon 508 627 . + . ID=g2971.t1.exon2;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . CDS 508 627 . + 1 ID=cds.g2971.t1;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . exon 728 908 . + . ID=g2971.t1.exon3;Parent=g2971.t1 NODE_5080_length_1036_cov_30.7263_potentialcontaminant . CDS 728 908 . + 1 ID=cds.g2971.t1;Parent=g2971.t1;3_prime_partial=true #PROT g2971.t1 g2971 MKIEVELLSKEKATEMLIQRIRQDQELFRDEFERWQFEKDDLFARLTEDIELTQAEVMRLREHCDVLRRDRQAAELDAMAATEKELEGRLRVLIEQQLFRESQLRDRMQEMEQRNMQELVDQWQREYAR # ORIGINAL: g13141.t1 original gene structure, not modified by PASA NODE_6357_length_585_cov_26.1471 AUGUSTUS gene 1 540 . - . ID=g13141;Name=g13141.t1 NODE_6357_length_585_cov_26.1471 AUGUSTUS mRNA 1 540 . - . ID=g13141.t1;Parent=g13141;Name=g13141.t1 NODE_6357_length_585_cov_26.1471 AUGUSTUS exon 526 540 . - . ID=g13141.t1.exon1;Parent=g13141.t1 NODE_6357_length_585_cov_26.1471 AUGUSTUS CDS 526 540 . - 0 ID=cds.g13141.t1;Parent=g13141.t1 NODE_6357_length_585_cov_26.1471 AUGUSTUS exon 1 150 . - . ID=g13141.t1.exon2;Parent=g13141.t1 NODE_6357_length_585_cov_26.1471 AUGUSTUS CDS 1 150 . - 0 ID=cds.g13141.t1;Parent=g13141.t1 #PROT g13141.t1 g13141 MQRYKNEGEMIGDAFKLYWHFDEEQGSGLVGIFLTVFIYACDMFLGCVLCYVYFL # PASA_UPDATE: g129.t1, single gene model update, valid-1, status:[pasa:asmbl_7959,status:12], valid-1 NODE_524_length_21859_cov_41.3845 . gene 6405 10368 . - . ID=g129;Name=g129.t1 NODE_524_length_21859_cov_41.3845 . mRNA 6405 10368 . - . ID=g129.t1;Parent=g129;Name=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 10289 10368 . - . ID=g129.t1.exon1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 10289 10368 . - 0 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 9686 10018 . - . ID=g129.t1.exon2;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 9686 10018 . - 1 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 9356 9476 . - . ID=g129.t1.exon3;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 9356 9476 . - 1 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 8789 9042 . - . ID=g129.t1.exon4;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 8789 9042 . - 0 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 8388 8565 . - . ID=g129.t1.exon5;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 8388 8565 . - 1 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . exon 6405 8090 . - . ID=g129.t1.exon6;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . CDS 6984 8090 . - 0 ID=cds.g129.t1;Parent=g129.t1 NODE_524_length_21859_cov_41.3845 . three_prime_UTR 6405 6983 . - . ID=g129.t1.utr3p1;Parent=g129.t1 #PROT g129.t1 g129 MSGIITETSTVMRPSSAVDIPNLSLTSQGDGAESAASSVGSVDYSTLKKRRPKGTGVDAFDAKYRLSGEIIGRGTSSIVQTCRERATNAEFVVKTVDIDPNKAHWVMEQCQREHDILRMCKEHPNIVQLIDYFATPTKVHFVLERLYGGALFDRVISRGSLTEYEASLVIADIANALLFCHSNGIAHRDLKPQNVLCASLADIVPVKITDFNLGNSSTTVTTPPLKTPVGTPEYWAPEIIDVMYDPSHTYDKRCDIWSLGCLLYMLLCGHPPFVGGCGPNCGWNAGNGCEYCEDSLQERIQLGEFDFDGPEWYGISDNAKDLICGMLCTDVASRLTCESVRAHKWFQTAGISPATPLMSPAVFSRGSMVAYARFARELNAMNRGDGDDSLQNSFNSSSIAGGANPFFPEGKSLEHSSSSLTEFGAPPSFRGAETSKPPAQLSNGGSLGLVAALSAFGLSASNAQNTIANGGDNNSVAHVPPETWPAKVVSSATAPSSSASTQQQPATPVAPLSRPLSSISAADARGSGGSSRRSSDISDDGSDRTRLSLDGLSLSKSSILSRRANGTRGRRRSSGGNSTASFALSSQQSSYADGNAFPTGGRQDDGGGGGGDKAGGAAVRLGALASNSMLSTDSEISPTETDSLGSFPESPAAHSSDHVVRALQDGSATSVGSKGRARLSEDETQFVLDE* # PASA_UPDATE: g131.t1, single gene model update, valid-1, status:[pasa:asmbl_7960,status:3], valid-1 NODE_524_length_21859_cov_41.3845 . gene 13605 15245 . - . ID=g131;Name=g131.t1 NODE_524_length_21859_cov_41.3845 . mRNA 13605 15245 . - . ID=g131.t1;Parent=g131;Name=g131.t1 NODE_524_length_21859_cov_41.3845 . five_prime_UTR 14994 15245 . - . ID=g131.t1.utr5p1;Parent=g131.t1 NODE_524_length_21859_cov_41.3845 . exon 14253 15245 . - . ID=g131.t1.exon1;Parent=g131.t1 NODE_524_length_21859_cov_41.3845 . CDS 14253 14993 . - 0 ID=cds.g131.t1;Parent=g131.t1 NODE_524_length_21859_cov_41.3845 . exon 13605 14053 . - . ID=g131.t1.exon2;Parent=g131.t1 NODE_524_length_21859_cov_41.3845 . CDS 13691 14053 . - 0 ID=cds.g131.t1;Parent=g131.t1 NODE_524_length_21859_cov_41.3845 . three_prime_UTR 13605 13690 . - . ID=g131.t1.utr3p1;Parent=g131.t1 #PROT g131.t1 g131 MGCASSTQVQTVGTATSKALEDSQHGNELSKTPKAKKASEDDSSGSEYETDSDENNESKPSTGKKNETTFDHGNEPDDVAQIEGPAKRKASKGNRRSSLDDMIDELDMDTKKKPPGQSLPPKSKSMSKGSLDDAVDDIMSSGNNLATAKEQPVKSPSAKAQTLELIKTDDKDDDMPPPAKRAFGDGKGMNAKDIEKEKKREEKEARDRDKAAAKARTKELKGILSEKKKKEKELAKVEKDFEKRKEKALRKGETIPDDDPSIAAIDRLKETIASLDADAKAINGMQTGVSGDELNLSMNSNFSNSGNGTTVLTGGSKLNGHVRSVASDGRSSPESVASTKASPVKKAIAEDNYLPGMIDDPMDEVDL* # PASA_UPDATE: g133.t1, single gene model update, valid-1, status:[pasa:asmbl_7958,status:12], valid-1 NODE_524_length_21859_cov_41.3845 . gene 20423 21633 . + . ID=g133;Name=g133.t1 NODE_524_length_21859_cov_41.3845 . mRNA 20423 21633 . + . ID=g133.t1;Parent=g133;Name=g133.t1 NODE_524_length_21859_cov_41.3845 . five_prime_UTR 20423 20583 . + . ID=g133.t1.utr5p1;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . exon 20423 20897 . + . ID=g133.t1.exon1;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . CDS 20584 20897 . + 0 ID=cds.g133.t1;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . exon 21190 21329 . + . ID=g133.t1.exon2;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . CDS 21190 21329 . + 1 ID=cds.g133.t1;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . exon 21461 21633 . + . ID=g133.t1.exon3;Parent=g133.t1 NODE_524_length_21859_cov_41.3845 . CDS 21461 21633 . + 2 ID=cds.g133.t1;Parent=g133.t1 #PROT g133.t1 g133 MAEIRMQSASDDVQLDLPNTQGESFSGARGVRKLDRSIRTFAKRNTADGLHAKVDGPSKKIVDFDWTSYGEVTFQSNKQKAQFVVVRNNARQSMEQAIKFLYSDSFNLEKPEFLISITGGAGNLDEFDERRKSQLQQLFTRAIARTAVDTSALIVTGGMHAGVMEYAGRAVSDLGCKTDLLGICVLKKFVGYERFVHDDHRETYMQVS* # PASA_UPDATE: g130.t1, single gene model update, valid-1, status:[pasa:asmbl_7957,status:3], valid-1 NODE_524_length_21859_cov_41.3845 . gene 11111 13105 . + . ID=g130;Name=g130.t1 NODE_524_length_21859_cov_41.3845 . mRNA 11111 13105 . + . ID=g130.t1;Parent=g130;Name=g130.t1 NODE_524_length_21859_cov_41.3845 . five_prime_UTR 11111 11170 . + . ID=g130.t1.utr5p1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . exon 11111 11408 . + . ID=g130.t1.exon1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . CDS 11171 11408 . + 0 ID=cds.g130.t1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . exon 11671 11790 . + . ID=g130.t1.exon2;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . CDS 11671 11790 . + 2 ID=cds.g130.t1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . exon 12099 12226 . + . ID=g130.t1.exon3;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . CDS 12099 12226 . + 2 ID=cds.g130.t1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . exon 12498 12626 . + . ID=g130.t1.exon4;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . CDS 12498 12626 . + 0 ID=cds.g130.t1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . exon 12893 13105 . + . ID=g130.t1.exon5;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . CDS 12893 13060 . + 0 ID=cds.g130.t1;Parent=g130.t1 NODE_524_length_21859_cov_41.3845 . three_prime_UTR 13061 13105 . + . ID=g130.t1.utr3p1;Parent=g130.t1 #PROT g130.t1 g130 MASLIRRSLMAVRATMPLRGSRSGSLKVVRRQDLEDILKGKDPYGKDAAPKIVKKMERDIPPGATMRKRVKKAAVTNDIDIKFGQAVEITPENHDAAVEKIADMITAEAKTSQRVDRLPLVPRVIPEHGDINVLASVEAQIPAANAKRALFAIVQVAGHQFKVTESDVIVTQKIMAEAGERIRLEKILAVGSPDFSLFGTPLVDKSMVSINATVMEQTHHPTVTVFKMKRRKTYHRTLYHTQDATRLRIDHIEVSPSLQE* # ORIGINAL: g128.t1 original gene structure, not modified by PASA NODE_524_length_21859_cov_41.3845 AUGUSTUS gene 159 5631 . + . ID=g128;Name=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS mRNA 159 5631 . + . ID=g128.t1;Parent=g128;Name=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 159 201 . + . ID=g128.t1.exon1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 159 201 . + 2 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 608 773 . + . ID=g128.t1.exon2;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 608 773 . + 1 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 1009 1090 . + . ID=g128.t1.exon3;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 1009 1090 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 1246 1811 . + . ID=g128.t1.exon4;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 1246 1811 . + 2 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 2163 2345 . + . ID=g128.t1.exon5;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 2163 2345 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 2496 2662 . + . ID=g128.t1.exon6;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 2496 2662 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 2979 3060 . + . ID=g128.t1.exon7;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 2979 3060 . + 1 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 3282 3383 . + . ID=g128.t1.exon8;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 3282 3383 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 3714 3854 . + . ID=g128.t1.exon9;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 3714 3854 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 4078 4399 . + . ID=g128.t1.exon10;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 4078 4399 . + 0 ID=cds.g128.t1;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS exon 4721 5631 . + . ID=g128.t1.exon11;Parent=g128.t1 NODE_524_length_21859_cov_41.3845 AUGUSTUS CDS 4721 5631 . + 2 ID=cds.g128.t1;Parent=g128.t1 #PROT g128.t1 g128 LSAFPQVAIRSAARVLSLVLWPAVVQLQEMKDGKGKDGKGRPAAAGPNPDAKMVTDKRFAHVHIDPRFKTLPRDKNKVKIDPRFKGMFTEDRFKTTYKVDKYGRRIDKTTSEQLERFYNVEEDEEDGNEVSAEGEEDAEDTPAKKAKKPASTKAVVGKTKAVVAKMTKPTKQAPTADSEDQSDDMEGVVVAEGSSDGASESDESDDEEAEFRPDSEIDYARGAGLGSDSDSEDDAGLWSGEEGESEISEDDLEDGSRLPSAGRAPVTENATRRFAMCNMEWDKVKAVDLFVIVNSFKPPTGIVHSVAVYPSEFGLQRMAEESEKGPIAIMGRDEKHRLEQLQKKKKTRAGSEDPSDGANESSAVVVAPKKKKAKRGKKGLPVLDSDDSDQETGELHPEAMRRYELSRMKYYYAVVDCDNAHTAAAIYDQCDGTEFEASSNALDLRFIPDDVTFDHPPRDVARELPSDFKPSEFYTSALQHSRVKLTWDETESERTKTTMRKFSRDDVREMDFKAYLATSSESEEESEDSDDEDSGPVSRAKIVELSDGSEGGEGGTAGARGVANDSSDSADPSQEESTAVVAVGKADAQDAKERRKELKRQKARAKYLTLLGLTDKFGPKSKVTKAADGDEGEEMEITFEPGLKDKAVELVRKKKERDAGGEKSAWDEYLEKRRQKKKEKKAAWKDRAQRRDDGGGDEEGAGESDAGSDLSFSEIDRVPDAVQDAGGKAGSKGKGKGGKKGEETEDDKRKRAELELLMLDEDETTANRKHFSLKKIMETEAVDELGRPVKPKKKKRKARDNDTDEEDDTNIGTAKGDADFEIDVHDPRFAAMYSSHKFQLDPTHPQFKRTKSTAKILEERTKRRRLGEREGESAPSGVSASASASGVKKINDASLSLLVNSVKNKAARASGLPTHQKSKK* # PASA_UPDATE: g132.t1, single gene model update, valid-1, status:[pasa:asmbl_7962,status:12], valid-1 NODE_524_length_21859_cov_41.3845 . gene 15789 19956 . - . ID=g132;Name=g132.t1 NODE_524_length_21859_cov_41.3845 . mRNA 15789 19956 . - . ID=g132.t1;Parent=g132;Name=g132.t1 NODE_524_length_21859_cov_41.3845 . five_prime_UTR 19936 19956 . - . ID=g132.t1.utr5p1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 19756 19956 . - . ID=g132.t1.exon1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 19756 19935 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 19509 19654 . - . ID=g132.t1.exon2;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 19509 19654 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 19309 19397 . - . ID=g132.t1.exon3;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 19309 19397 . - 1 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 18814 18942 . - . ID=g132.t1.exon4;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 18814 18942 . - 2 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 18500 18631 . - . ID=g132.t1.exon5;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 18500 18631 . - 2 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 18120 18255 . - . ID=g132.t1.exon6;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 18120 18255 . - 2 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 17896 17980 . - . ID=g132.t1.exon7;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 17896 17980 . - 1 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 17670 17780 . - . ID=g132.t1.exon8;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 17670 17780 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 17337 17486 . - . ID=g132.t1.exon9;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 17337 17486 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 17052 17120 . - . ID=g132.t1.exon10;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 17052 17120 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 16676 16766 . - . ID=g132.t1.exon11;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 16676 16766 . - 0 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 16335 16487 . - . ID=g132.t1.exon12;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 16335 16487 . - 2 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . exon 15789 16101 . - . ID=g132.t1.exon13;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . CDS 15971 16101 . - 2 ID=cds.g132.t1;Parent=g132.t1 NODE_524_length_21859_cov_41.3845 . three_prime_UTR 15789 15970 . - . ID=g132.t1.utr3p1;Parent=g132.t1 #PROT g132.t1 g132 MQVVVCGDKQHSEFREMAPPTVSFPSAENRRISLRRRSFIAPTVNPFSYSQKLDVVQKIKIAIAAVTIMPIRLICLIIVMLLMSLFAFISVYGLSVKQLQMEPIKGWRRKAQWPLPFFNRMALFFLGFHYVKTKGKLATAKEAPLLVVAPHSSFADFFPIVAAAWPSAVSKLENSKIPIIGNIIRSVQPIFVDRLDPNSRKKCLEDIKERVTSNGKWQQVMIFPEGTTTNRQCLVTFKNGAFVAGVPVQPVALKYPNLHFDPAWVLLGPSGLQSLFLMLCQLVNHMEIEYLPVYTPSEEEKRDPTLFANNVRNKLAVALGIPVTDHSFEDVQLMSEAAKHQLPMETGIVEYQKISRKLGINLNTINDMLQRFKEIDRDGDGEIDLEEFAEYLNLPVSRYLEKLFELYDRDESGKIDFREYLIGLSLVSRPANTEDTIRLAFKTFDEQGTGCVTQDGLAKILRRAFPYISDQEIRVLFTSVHGSRDGVISFDEFQKFMSTHLEYASLVDEIRQAHVFDQQEEAAKKGEEEKKEE* # ORIGINAL: g13434.t1 original gene structure, not modified by PASA NODE_4432_length_1625_cov_46.2226 AUGUSTUS gene 105 1020 . - . ID=g13434;Name=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS mRNA 105 1020 . - . ID=g13434.t1;Parent=g13434;Name=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS exon 809 1020 . - . ID=g13434.t1.exon1;Parent=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS CDS 809 1020 . - 0 ID=cds.g13434.t1;Parent=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS exon 417 635 . - . ID=g13434.t1.exon2;Parent=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS CDS 417 635 . - 1 ID=cds.g13434.t1;Parent=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS exon 105 240 . - . ID=g13434.t1.exon3;Parent=g13434.t1 NODE_4432_length_1625_cov_46.2226 AUGUSTUS CDS 105 240 . - 1 ID=cds.g13434.t1;Parent=g13434.t1 #PROT g13434.t1 g13434 MLCAVVVQVRKEAVEDVKRKCIEIDYPLLEEYDFRNDTVNKDLDIDLKPTTALRPYQEKSLSKMFGNGRARSGVIVLPCGAGKTLVGVTATCTVKKRTLVLCTSGVAVDQWVNQYRMWSTLVDIGKFTAQTKGERPPENGVLVSTYSMVAFTGRRSVEAERVMRFIQEVEWGLLILDEVQVVPAAMFRK # PASA_UPDATE: g9212.t1, single gene model update, valid-1, status:[pasa:asmbl_2349,status:12], valid-1 NODE_1696_length_9660_cov_40.899 . gene 4460 6919 . + . ID=g9212;Name=g9212.t1 NODE_1696_length_9660_cov_40.899 . mRNA 4460 6919 . + . ID=g9212.t1;Parent=g9212;Name=g9212.t1 NODE_1696_length_9660_cov_40.899 . five_prime_UTR 4460 4574 . + . ID=g9212.t1.utr5p1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . exon 4460 4674 . + . ID=g9212.t1.exon1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . CDS 4575 4674 . + 0 ID=cds.g9212.t1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . exon 5223 5347 . + . ID=g9212.t1.exon2;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . CDS 5223 5347 . + 2 ID=cds.g9212.t1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . exon 5686 5764 . + . ID=g9212.t1.exon3;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . CDS 5686 5764 . + 0 ID=cds.g9212.t1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . exon 6105 6919 . + . ID=g9212.t1.exon4;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . CDS 6105 6238 . + 2 ID=cds.g9212.t1;Parent=g9212.t1 NODE_1696_length_9660_cov_40.899 . three_prime_UTR 6239 6919 . + . ID=g9212.t1.utr3p1;Parent=g9212.t1 #PROT g9212.t1 g9212 MASLRTVAARIGGLARIHTSARVFAAAAGHSAPVADNRPVPNDDEVPTDLQQATGHESEELRLTAKYGKNPWFWVPEPGWGTKASPRVIPAFNDFRVVGCTGGDGTIGKHKHGIVWLTVFQGELGRCPDCGQAFKLKRVQESYHE* # PASA_UPDATE: g9210.t1, single gene model update, valid-1, status:[pasa:asmbl_2350,status:12], valid-1 NODE_1696_length_9660_cov_40.899 . gene 876 1446 . + . ID=g9210;Name=g9210.t1 NODE_1696_length_9660_cov_40.899 . mRNA 876 1446 . + . ID=g9210.t1;Parent=g9210;Name=g9210.t1 NODE_1696_length_9660_cov_40.899 . exon 876 1446 . + . ID=g9210.t1.exon1;Parent=g9210.t1 NODE_1696_length_9660_cov_40.899 . CDS 876 1250 . + 0 ID=cds.g9210.t1;Parent=g9210.t1 NODE_1696_length_9660_cov_40.899 . three_prime_UTR 1251 1446 . + . ID=g9210.t1.utr3p1;Parent=g9210.t1 #PROT g9210.t1 g9210 MCTLSHDGGIIRIDVAEDLFKQSENSARSSESSLILHLASAQKNTGCGDVDIEFHQISSSNRTLFRSSVEGIAAAAKTHRFSPIEKHVIALALHRPRAPVYIAFETSERCNECLRLLNQLLSDQ* # ORIGINAL: g9211.t1 original gene structure, not modified by PASA NODE_1696_length_9660_cov_40.899 AUGUSTUS gene 1859 3006 . - . ID=g9211;Name=g9211.t1 NODE_1696_length_9660_cov_40.899 AUGUSTUS mRNA 1859 3006 . - . ID=g9211.t1;Parent=g9211;Name=g9211.t1 NODE_1696_length_9660_cov_40.899 AUGUSTUS exon 2739 3006 . - . ID=g9211.t1.exon1;Parent=g9211.t1 NODE_1696_length_9660_cov_40.899 AUGUSTUS CDS 2739 3006 . - 0 ID=cds.g9211.t1;Parent=g9211.t1 NODE_1696_length_9660_cov_40.899 AUGUSTUS exon 1859 2400 . - . ID=g9211.t1.exon2;Parent=g9211.t1 NODE_1696_length_9660_cov_40.899 AUGUSTUS CDS 1859 2400 . - 2 ID=cds.g9211.t1;Parent=g9211.t1 #PROT g9211.t1 g9211 MPSLLGTAHAATSLAWRLRTLSMKRLAFMLVAPVVHTFVSSFPFFRPTTNALCGAYGGLSATVPMLLVLSLVSWLLSPEAKKLGNQVVEAADNAARSITADDRDVASTAAGTGAGTGTKASSAPVTSASAPSRSYIVPELGFELPSLRWTLAEWRTWLAGSVGLSFKFAALFAYATTAGIAYGLFAPKWTWWLPSVLSGTFFSIIAWGLASSYLSRFMPSIGLGKFQIPAPGTPLADWVTPVNLAIAAYGWGLGTMTSNCQSLIRSWEK* # PASA_UPDATE: g105.t1, single gene model update, valid-1, status:[pasa:asmbl_3032,status:12], valid-1 NODE_1929_length_8485_cov_39.8468 . gene 136 3035 . - . ID=g105;Name=g105.t1 NODE_1929_length_8485_cov_39.8468 . mRNA 136 3035 . - . ID=g105.t1;Parent=g105;Name=g105.t1 NODE_1929_length_8485_cov_39.8468 . exon 2973 3035 . - . ID=g105.t1.exon1;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . CDS 2973 3035 . - 0 ID=cds.g105.t1;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . exon 2436 2587 . - . ID=g105.t1.exon2;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . CDS 2436 2587 . - 0 ID=cds.g105.t1;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . exon 1824 1987 . - . ID=g105.t1.exon3;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . CDS 1824 1987 . - 1 ID=cds.g105.t1;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . exon 136 1548 . - . ID=g105.t1.exon4;Parent=g105.t1 NODE_1929_length_8485_cov_39.8468 . CDS 136 1548 . - 2 ID=cds.g105.t1;Parent=g105.t1;3_prime_partial=true #PROT g105.t1 g105 MANRTLLHLKKIEALKDLTEKDVNQLEWPAKQRIFCALFGRLGADIPRALVEQRSRDRAQEKKEGADQATIRAHEDAFRRVFAKAVVSEVAALKCPFSLVAQDIVTPGADRTACYAAFRFLATAVPASTPGKPASAHKAYASPKPQAANTGVDGGAKTTSKSVSASARREGSSGSSRSVRPDAGMSPRYPPAAEDGTSLASYGRPEASKGHPDPYLISSFLARRERDERIAKQQESADEYGRRNAAADYGFRVAPPDDIDTQGHVDAYEDDFEHTIDNESDGGPDGVGKLGVGKADGTVRNGNSKPGGATAVTNVERLRIMASERKREGRGRREESERGHLSDNRIVKSVDEEIARQRTLRHNADVGVSRGMNSSGPLPSSKVVKERDVRFSDDADAEEEVVSDTGGVSDKSVESDARSVESEKSDDVGRARRKAVKSHRAPRPSRDRDEEDSGSRETVQLREEVKRLRAELDSIASVYAQALDTSDVGREGDGGDRGTTDGRLLFLLKSQCFQLERQVAHMSLRMSRVKNIVSEADGALAAVNVALDNALLQLGKKGKSDEGDGIVSSVRSVIEKAAFTVREYRGRMDRAGTEISE # PASA_UPDATE: g106.t1, single gene model update, valid-1, status:[pasa:asmbl_3033,status:12], valid-1 NODE_1929_length_8485_cov_39.8468 . gene 3640 7839 . + . ID=g106;Name=g106.t1 NODE_1929_length_8485_cov_39.8468 . mRNA 3640 7839 . + . ID=g106.t1;Parent=g106;Name=g106.t1 NODE_1929_length_8485_cov_39.8468 . five_prime_UTR 3640 3868 . + . ID=g106.t1.utr5p1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 3640 3962 . + . ID=g106.t1.exon1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 3869 3962 . + 0 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 4259 4269 . + . ID=g106.t1.exon2;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 4259 4269 . + 2 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 4544 4641 . + . ID=g106.t1.exon3;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 4544 4641 . + 0 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 5010 5106 . + . ID=g106.t1.exon4;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 5010 5106 . + 1 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 5398 5568 . + . ID=g106.t1.exon5;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 5398 5568 . + 0 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 5904 5955 . + . ID=g106.t1.exon6;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 5904 5955 . + 0 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 6183 6247 . + . ID=g106.t1.exon7;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 6183 6247 . + 2 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 6663 6742 . + . ID=g106.t1.exon8;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 6663 6742 . + 0 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 7228 7357 . + . ID=g106.t1.exon9;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 7228 7357 . + 1 ID=cds.g106.t1;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . exon 7750 7839 . + . ID=g106.t1.exon10;Parent=g106.t1 NODE_1929_length_8485_cov_39.8468 . CDS 7750 7839 . + 0 ID=cds.g106.t1;Parent=g106.t1 #PROT g106.t1 g106 MAERKRKAPSEGSKLESKSPAEFFANNKNIAGFDNPGKSLYTTVREFVENSLDAAESIGVLPVIQLTIEEIDQAAFHSLIGLTEQSRKNEALYTQDDKPKKRQKTDSKKSKDISVVALPIELNDEADEDALLREKGQKEKEKEKCRGKTMYYRVTVKDNGSGMKHDDIPNMLGRVLSGTKYGVKQARGRFGLGAKMALIWSKMSTGRPIEVRSATSETSQISRCVLDIDIYKNQPHIIAHDKEPNASGFRGTEISVIIEGSWTSYRAKILQYMRQMAVITPYAEFQFRFQTPAER* # ORIGINAL: g6974.t1 original gene structure, not modified by PASA NODE_1787_length_9256_cov_40.6548 AUGUSTUS gene 2040 7248 . + . ID=g6974;Name=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS mRNA 2040 7248 . + . ID=g6974.t1;Parent=g6974;Name=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 2040 2200 . + . ID=g6974.t1.exon1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 2040 2200 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 2425 2454 . + . ID=g6974.t1.exon2;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 2425 2454 . + 1 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 2660 2783 . + . ID=g6974.t1.exon3;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 2660 2783 . + 1 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 2954 3091 . + . ID=g6974.t1.exon4;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 2954 3091 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 3308 3514 . + . ID=g6974.t1.exon5;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 3308 3514 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 3919 4026 . + . ID=g6974.t1.exon6;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 3919 4026 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 4224 4297 . + . ID=g6974.t1.exon7;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 4224 4297 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 4518 5395 . + . ID=g6974.t1.exon8;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 4518 5395 . + 1 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 5568 5639 . + . ID=g6974.t1.exon9;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 5568 5639 . + 2 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 5845 6344 . + . ID=g6974.t1.exon10;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 5845 6344 . + 2 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 6801 6879 . + . ID=g6974.t1.exon11;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 6801 6879 . + 0 ID=cds.g6974.t1;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS exon 7148 7248 . + . ID=g6974.t1.exon12;Parent=g6974.t1 NODE_1787_length_9256_cov_40.6548 AUGUSTUS CDS 7148 7248 . + 2 ID=cds.g6974.t1;Parent=g6974.t1 #PROT g6974.t1 g6974 MGIQGLLTLVKDVAQPTHVSAYAGSTVAIDGYAWLHRGSYSCSYELAQNKPTDNKALEEEQRRARRADMRAQANHYLQIGDRTAAHKCFKKCVDITPEMAFNLIQKCRDMGIESIVAPYEADAQMAYLAHTGRVNAIITEDSDLLVYGCPTVLFKMDEGGYGSQIRFKEISASAEFGGPLTLECFRRVCILSGCDYLPSILGMGLKTARKLLAKFHTVEDVLHNVSGTMSVPRDYLERFRRAELTFLHHLVYDPGEGRIVHVTPLPDYLCGREDELSFLGRLDIPPETAAGIANGRLHPITYEPFHVPQAAPARMFPWRPQAAPSAVSNGLVFNGVTQTAAERLTSKTIVATAKMASWAMEGLRAKVSGENGDGNGGDARGGGNDMDARTGVRKRTLDEAASDACESAGSTEVDYVAAGGESAGGGSGEEMGATTTLVSFNMREPIGDDVLVWAKRQRSQPIDNPYKRSLSGTAAPAMDVDGPIAAAQTDTPCDTRAPMEGIEGTQAHVTRSMSTGSTYDPPPKSVFENIPKTTVTTDAQRRRLQPPQKKGGPSYFRGKLIEDKTQMKLAGFLVGSTTAAKSDYKPPRTCSAPEISLEALSSTSVRTSAQQTRNPFLCGTDGDAPLDQLQGASDDRSIGGHRRGVDSASQWMKGDDSNKENVTESRFFRSEKSSVFESFRSGCDDAYDGAKRRKTVGDAPSTHAFSMDAEEDPTFVNCRSEEGCTGAGDDLRRRDDEGRERMSATEESVFSAELRQFARGAPLSAGGDSFQQLISNADRGKGYSNPHIRPGAAVGSRIRTPVVLIWIDFVTLAPLAGPLAEEK* # PASA_UPDATE: g6973.t1, single gene model update, valid-1, status:[pasa:asmbl_2616,status:12], valid-1 NODE_1787_length_9256_cov_40.6548 . gene 21 1058 . - . ID=g6973;Name=g6973.t1 NODE_1787_length_9256_cov_40.6548 . mRNA 21 1058 . - . ID=g6973.t1;Parent=g6973;Name=g6973.t1 NODE_1787_length_9256_cov_40.6548 . five_prime_UTR 729 1058 . - . ID=g6973.t1.utr5p1;Parent=g6973.t1 NODE_1787_length_9256_cov_40.6548 . exon 620 1058 . - . ID=g6973.t1.exon1;Parent=g6973.t1 NODE_1787_length_9256_cov_40.6548 . CDS 620 728 . - 0 ID=cds.g6973.t1;Parent=g6973.t1 NODE_1787_length_9256_cov_40.6548 . exon 21 426 . - . ID=g6973.t1.exon2;Parent=g6973.t1 NODE_1787_length_9256_cov_40.6548 . CDS 21 426 . - 2 ID=cds.g6973.t1;Parent=g6973.t1;3_prime_partial=true #PROT g6973.t1 g6973 MVRPSLFLRCARTSDAINRFCQYKQTPISIKQFTEFGRKPTSDTAYQSCKFLHNELPIRLAHMTKEIDALPQNLLSMPSVQKVRSWYVQSFQELVSYPYKTPSQKTDVYVGDFSRVIKNVLKRHAPVVTTMAQGLIELKHTLGTTAIDPSVQYFLGGWWRNDPRLFTCAKW # PASA_UPDATE: g6975.t1, single gene model update, valid-1, status:[pasa:asmbl_2617,status:3], valid-1 NODE_1787_length_9256_cov_40.6548 . gene 7493 8772 . - . ID=g6975;Name=g6975.t1 NODE_1787_length_9256_cov_40.6548 . mRNA 7493 8772 . - . ID=g6975.t1;Parent=g6975;Name=g6975.t1 NODE_1787_length_9256_cov_40.6548 . five_prime_UTR 8679 8772 . - . ID=g6975.t1.utr5p1;Parent=g6975.t1 NODE_1787_length_9256_cov_40.6548 . exon 8478 8772 . - . ID=g6975.t1.exon1;Parent=g6975.t1 NODE_1787_length_9256_cov_40.6548 . CDS 8478 8678 . - 0 ID=cds.g6975.t1;Parent=g6975.t1 NODE_1787_length_9256_cov_40.6548 . exon 7493 8136 . - . ID=g6975.t1.exon2;Parent=g6975.t1 NODE_1787_length_9256_cov_40.6548 . CDS 7954 8136 . - 0 ID=cds.g6975.t1;Parent=g6975.t1 NODE_1787_length_9256_cov_40.6548 . three_prime_UTR 7493 7953 . - . ID=g6975.t1.utr3p1;Parent=g6975.t1 #PROT g6975.t1 g6975 MGRVDIRHFVGAVCALAFSIVLPLQLDGYISALSWHIVFIPLYAMDALIAYITAIVALRMSINTMSQPIIFRFVIRSVFVVIPLFVFELLLCQRLMGERDSTYSAIFSPLLFVACMGVLWSCCVVPG* # ORIGINAL: g3010.t1 original gene structure, not modified by PASA NODE_5804_length_711_cov_68.1242_potentialcontaminant AUGUSTUS gene 94 677 . - . ID=g3010;Name=g3010.t1 NODE_5804_length_711_cov_68.1242_potentialcontaminant AUGUSTUS mRNA 94 677 . - . ID=g3010.t1;Parent=g3010;Name=g3010.t1 NODE_5804_length_711_cov_68.1242_potentialcontaminant AUGUSTUS exon 94 677 . - . ID=g3010.t1.exon1;Parent=g3010.t1 NODE_5804_length_711_cov_68.1242_potentialcontaminant AUGUSTUS CDS 94 677 . - 0 ID=cds.g3010.t1;Parent=g3010.t1 #PROT g3010.t1 g3010 MFLEMLKASKNNAIEVSMDIEIDALNLLSHARQFKPCDVENLSSQVMQRGRLLMLNMKLLKSPKLPAHIYTLAALREAGDLLGIPDELLPHTEFVRIIDVRIPGLMIHELRELSGVIRNRIDRWLSSHASDFDDYEILDIFHSLLNTIPSDHRTPDDVADTQDMLRRIETKENMYRNNGIRIPYVNTLSDALRA # PASA_UPDATE: g10073.t1, single gene model update, valid-1, status:[pasa:asmbl_8071,status:12], valid-1 NODE_542_length_21521_cov_41.3826 . gene 20635 21453 . + . ID=g10073;Name=g10073.t1 NODE_542_length_21521_cov_41.3826 . mRNA 20635 21453 . + . ID=g10073.t1;Parent=g10073;Name=g10073.t1 NODE_542_length_21521_cov_41.3826 . five_prime_UTR 20635 20697 . + . ID=g10073.t1.utr5p1;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . exon 20635 20861 . + . ID=g10073.t1.exon1;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . CDS 20698 20861 . + 0 ID=cds.g10073.t1;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . exon 21031 21071 . + . ID=g10073.t1.exon2;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . CDS 21031 21071 . + 1 ID=cds.g10073.t1;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . exon 21227 21453 . + . ID=g10073.t1.exon3;Parent=g10073.t1 NODE_542_length_21521_cov_41.3826 . CDS 21227 21453 . + 2 ID=cds.g10073.t1;Parent=g10073.t1;3_prime_partial=true #PROT g10073.t1 g10073 MLSVMRTRAVSAARGAVSTCTRTATRSCRVAATRPFTAAAARAPPSLASSSASTRATPVANGLRWYSTGGLPKHYQLVMPALSPTMTQGNLVKWTKKEGDAVAVGDSLAEIETDKAVMDFESVEDGFLAKIFVQDGTKDVVVGK # ORIGINAL: g10068.t1 original gene structure, not modified by PASA NODE_542_length_21521_cov_41.3826 AUGUSTUS gene 9998 11870 . + . ID=g10068;Name=g10068.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS mRNA 9998 11870 . + . ID=g10068.t1;Parent=g10068;Name=g10068.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 9998 10890 . + . ID=g10068.t1.exon1;Parent=g10068.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 9998 10890 . + 0 ID=cds.g10068.t1;Parent=g10068.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 11012 11870 . + . ID=g10068.t1.exon2;Parent=g10068.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 11012 11870 . + 1 ID=cds.g10068.t1;Parent=g10068.t1 #PROT g10068.t1 g10068 MPASRSAGGTLPAALTSIMFIRALILVVCVACSTAAFPPADASQRATNVRVDGPYVSTAERTETKADSDGTDPLTCPPAPQEIDPTRLSREFVYHGAPPYSAFTSAFRSLSIPEGRPLSTAAAGRAFGRKWPLYVMTRKRFSFNSRVMSRVMREIAVAESVPGPGDTPLISFVEGVYNTIAGSKVMQVITKRQLAIRDGCSFDAMGIQPATFVNFDSGECNLLKKGMAEDKIYVIKPHRGQQGKGIRVASGSSDDMRMAYEANCIARPKTGSSAVPVLIIQEYIAQPLLIKGSKFDIRAYMLIGSTRPFQVFFRAGYIRRSLTLYDPRATALKAHLTNTHVQESKSGYDGDNHVWSMGRLRTYLEMDAAVAPKGWVDNTLIPHMARVCRMLFESSRHKLIRRRGSFQLLGLDFMVDKRLNILFIEGNGSPGLGYQSSWKMQLSRGISRDLFRLVYALHAKPASVARVKEGETVHGFQLVYNERLSRCKALRELGPNANEEDVKKLMASSYSMCTEFSAQLTSGTGSDMPSTYLANGVVLAEESAYEDEDADAVNAAIKAAETADSAAADPVEEYLGFADRGSN* # PASA_UPDATE: g10065.t1, single gene model update, valid-1, status:[pasa:asmbl_8065,status:12], valid-1 NODE_542_length_21521_cov_41.3826 . gene 47 5053 . - . ID=g10065;Name=g10065.t1 NODE_542_length_21521_cov_41.3826 . mRNA 47 5053 . - . ID=g10065.t1;Parent=g10065;Name=g10065.t1 NODE_542_length_21521_cov_41.3826 . five_prime_UTR 4840 5053 . - . ID=g10065.t1.utr5p1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 4750 5053 . - . ID=g10065.t1.exon1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 4750 4839 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 4351 4402 . - . ID=g10065.t1.exon2;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 4351 4402 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 3724 3845 . - . ID=g10065.t1.exon3;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 3724 3845 . - 2 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 3159 3278 . - . ID=g10065.t1.exon4;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 3159 3278 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 2815 2959 . - . ID=g10065.t1.exon5;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 2815 2959 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 2606 2700 . - . ID=g10065.t1.exon6;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 2606 2700 . - 2 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 1908 2446 . - . ID=g10065.t1.exon7;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 1908 2446 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 1700 1778 . - . ID=g10065.t1.exon8;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 1700 1778 . - 1 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 1370 1516 . - . ID=g10065.t1.exon9;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 1370 1516 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 1141 1250 . - . ID=g10065.t1.exon10;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 1141 1250 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 967 1045 . - . ID=g10065.t1.exon11;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 967 1045 . - 1 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 564 717 . - . ID=g10065.t1.exon12;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 564 717 . - 0 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 370 423 . - . ID=g10065.t1.exon13;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 370 423 . - 2 ID=cds.g10065.t1;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . exon 47 213 . - . ID=g10065.t1.exon14;Parent=g10065.t1 NODE_542_length_21521_cov_41.3826 . CDS 47 213 . - 2 ID=cds.g10065.t1;Parent=g10065.t1;3_prime_partial=true #PROT g10065.t1 g10065 MSAPIQWRRFMFFEKDVVREDTSSGQPTLQSLDISASTSGRGFLVFGDTSGSIHLVDRTFAITSFKAYEIRVTHLLQAKQHGVLISVGEDEEGINPVVKVWSRDKMDRQGCPACVRTIKVSHNGRPSPVSTLAVLENLTQLAVGLVDGTVILIRGDVSRDRFTRQKILHTDALPITALGFRQVGKDVTLFVATPSATCSYSTSGREVKVELDTEGADLNCGTMSEPDQDFVVGRRGAVYFYYPDSRGSCYAFEGDKKLVTWFRNYLVVVGGVGDAQPQPSAGQSPNPAAKRALGGGSMVTVYDIKNRFIAYSGSFGDVLAVVAEWGSVFVLTSDRRLYQLEERDAQTKLDMLFKKNLYPLAISLASSQHYDYDAIIDIFTQYGDHLYGKNDFDGAIAQYIRTIGHLEPSYVIRKFLDAQRIHNLTSYLQELHEHGSANADHTTLLLNCYTKLKDVKKLDEFIMTDKELNFDVETAIRVCRQASYCGHALYLARKYSQHDWYLRIQLEDVRNYQDALNYISTLDFFEAEKNLKNYGKTLVNHLPEATTRLLIALCTDYKGRGGAVAQPLEHGPAWEGGADPGRPKALSDVARDDGRSPAVAALRARPDEFIHIYVDQMRWLRVFLEYIVQAQPDCGTLVYNTLLELYLRDDA # PASA_UPDATE: g10070.t1, single gene model update, valid-1, status:[pasa:asmbl_8070,status:3], valid-1 NODE_542_length_21521_cov_41.3826 . gene 15550 16368 . + . ID=g10070;Name=g10070.t1 NODE_542_length_21521_cov_41.3826 . mRNA 15550 16368 . + . ID=g10070.t1;Parent=g10070;Name=g10070.t1 NODE_542_length_21521_cov_41.3826 . five_prime_UTR 15550 15675 . + . ID=g10070.t1.utr5p1;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . exon 15550 15872 . + . ID=g10070.t1.exon1;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . CDS 15676 15872 . + 0 ID=cds.g10070.t1;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . exon 15973 16024 . + . ID=g10070.t1.exon2;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . CDS 15973 16024 . + 1 ID=cds.g10070.t1;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . exon 16180 16368 . + . ID=g10070.t1.exon3;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . CDS 16180 16335 . + 0 ID=cds.g10070.t1;Parent=g10070.t1 NODE_542_length_21521_cov_41.3826 . three_prime_UTR 16336 16368 . + . ID=g10070.t1.utr3p1;Parent=g10070.t1 #PROT g10070.t1 g10070 MSKSNPTSAKRPANPARIGSSPYHLNCFSKAIEKGQGELTLDQNVVHQDAIWKTQVRFEADLSRKWQDNYGYMKGDEARPSSATMDQDPAVTGHVSQFPAATSREIGWVSRPDRINKIETSEFHGRQKSGLSYV* # PASA_UPDATE: g10066.t1, single gene model update, valid-1, status:[pasa:asmbl_8068,status:12], valid-1 NODE_542_length_21521_cov_41.3826 . gene 5253 6198 . + . ID=g10066;Name=g10066.t1 NODE_542_length_21521_cov_41.3826 . mRNA 5253 6198 . + . ID=g10066.t1;Parent=g10066;Name=g10066.t1 NODE_542_length_21521_cov_41.3826 . five_prime_UTR 5253 5273 . + . ID=g10066.t1.utr5p1;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . exon 5253 5425 . + . ID=g10066.t1.exon1;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . CDS 5274 5425 . + 0 ID=cds.g10066.t1;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . exon 5545 5794 . + . ID=g10066.t1.exon2;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . CDS 5545 5794 . + 1 ID=cds.g10066.t1;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . exon 5896 6198 . + . ID=g10066.t1.exon3;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . CDS 5896 6153 . + 0 ID=cds.g10066.t1;Parent=g10066.t1 NODE_542_length_21521_cov_41.3826 . three_prime_UTR 6154 6198 . + . ID=g10066.t1.utr3p1;Parent=g10066.t1 #PROT g10066.t1 g10066 MEGDAPIVRDSSKTCRRTAVTVFRNLVDSPFHLQIPFIANEQETIVAALDRSMILSPARKTDVVIGANATTRALEKGLLAAVLVDRDAGPPIVTAHLPALCQQTATRLCAVHGLSGYVARFRPTARGAVAVGIKKSAIGAGDDGLDLIVSSMPQCTAPWLPNGGGDETKIKEVRGGSGEGGPRSASVAVPRTDYIALRVKRLQSHHTPPMGRKVNSQLK* # ORIGINAL: g10072.t1 original gene structure, not modified by PASA NODE_542_length_21521_cov_41.3826 AUGUSTUS gene 17791 20221 . + . ID=g10072;Name=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS mRNA 17791 20221 . + . ID=g10072.t1;Parent=g10072;Name=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 17791 19180 . + . ID=g10072.t1.exon1;Parent=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 17791 19180 . + 0 ID=cds.g10072.t1;Parent=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 19281 19410 . + . ID=g10072.t1.exon2;Parent=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 19281 19410 . + 2 ID=cds.g10072.t1;Parent=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 19525 20221 . + . ID=g10072.t1.exon3;Parent=g10072.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 19525 20221 . + 1 ID=cds.g10072.t1;Parent=g10072.t1 #PROT g10072.t1 g10072 MMMSSSASSTASSLVAPSRSASSTGLGTSRAPSASEELDAYLASHGRRHVRSERQALYAEHIPHSHRPGHATASHAVRRRLVPRAVQTDATEVRAVGQWGTPSMGLARRIKTLSDTSGFLFGDRQPDIVAHPFENAEAMSDATDALLREQTENVGDSASVSTEWLVQGAAAHTGRESRGAYPASMSECSTEGLCVDGAGGVPAHIGTVRVSRVAGGSGARQHPPSPSRHKFRTAGNVMHEYTDGLAAVDARERALRASMEASRNSNAHGDWRGSPSSQRWDGGGAGGQLGVAALPHAHPPQYPRRATSPSAAPASPAQAVRAEGPVEILKNMLLAMQQYRVQVEDLGSRVVGGVPEYQHESHGDRVALDARNGGHMTPGDAVDAVASALSVDTDSHERAARGDGRGYGAAGGEDDAAVRLSLSLVPVIRAALAHPAAPSANHATTEAQAPAHPHVRRRSLHAQGDDTDASLQRSVAYASRLNSLLSPYDVDAQKPVNTANSADRNGSITAKLETLEATLHDIRRALSTSLPKAAGTAASRATANAEISTDDTRGFACADGDAWCGRCKAIESLIRQEHAPAPHHAHILLHASSRTPAVASASTHSSRGAFLSSSMSTAARPAALQQQHQQQHQQQHQQQHQQQYQQQYQQQYQHNLREQQQHGLYQATAPPVHANVRGGAGLHSGDIARLPASAYYGSGASSISAASVDSSTFAALLGYADDMSLTSAESVDASYRSS* # ORIGINAL: g10069.t1 original gene structure, not modified by PASA NODE_542_length_21521_cov_41.3826 AUGUSTUS gene 12362 15237 . - . ID=g10069;Name=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS mRNA 12362 15237 . - . ID=g10069.t1;Parent=g10069;Name=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 13886 15237 . - . ID=g10069.t1.exon1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 13886 15237 . - 0 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 13735 13777 . - . ID=g10069.t1.exon2;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 13735 13777 . - 1 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 13449 13632 . - . ID=g10069.t1.exon3;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 13449 13632 . - 0 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 13230 13347 . - . ID=g10069.t1.exon4;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 13230 13347 . - 2 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 12995 13079 . - . ID=g10069.t1.exon5;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 12995 13079 . - 1 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 12800 12875 . - . ID=g10069.t1.exon6;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 12800 12875 . - 0 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 12603 12707 . - . ID=g10069.t1.exon7;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 12603 12707 . - 2 ID=cds.g10069.t1;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 12362 12513 . - . ID=g10069.t1.exon8;Parent=g10069.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 12362 12513 . - 2 ID=cds.g10069.t1;Parent=g10069.t1 #PROT g10069.t1 g10069 MESPPPATPEVFVDIHTRDCTPRAAARAKKEYLGVLLEVCAASGELVAKDASSESVKPVASWRIRDNVVKVFHKCLEEGVMVEFRAPPVALKVDKVHSGDLRNFIRSFCKAAGQPVPASLSPVDLNENGLVEDEDADSAVTPLARRRTAPSGYIPINNLGNPQPRVGSLSAPSGLFKVRPNVLRTYSPKNPFAIRPSGGSSRGERIVSGAAASSATPAYRIPLITTAHQSVADRTTSQSRLMESDRDYDDKPADKTPFPHRSSTNFVDLTPQSLETREKPSGFRNIGNSCYVNAVLQALLALPSFVGAVAALVPVARGTAVLPGHNVLTSLGELATRRLAHMNDGSLAMAASETPEAVLGAVARRVPRFKGYKQEDAHEFLAALFDCVDEDCKRVRRSIPNTPHDIPFANAMSSIFALEVSHSITCVGCGTTSTVKESTPIISLDLPEHPVVSTSVGSMMGEFFRDERLEYRCDLCGAKAGAISEHKISALPSVLVLHVKRFRYNVEDAMNDRRADDVEYPRHLHIGRYCAPGCMSTRGGATARAQSPAVTAAKRSRGDGAVLQPGPKRRAVANENDKAVHRRLDFSETADSDEHAVLRTEEEQLEWALKESLRQADAEAMYSNDDSDKENALSKAPAYELTAVVSHLGTSASSGHYVCDAYDAAADKWRNFDDTFVRETYWGAVSGSARRRSAYLLFYVCTST* # ORIGINAL: g10071.t1 original gene structure, not modified by PASA NODE_542_length_21521_cov_41.3826 AUGUSTUS gene 16705 17362 . - . ID=g10071;Name=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS mRNA 16705 17362 . - . ID=g10071.t1;Parent=g10071;Name=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 17356 17362 . - . ID=g10071.t1.exon1;Parent=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 17356 17362 . - 0 ID=cds.g10071.t1;Parent=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 17085 17208 . - . ID=g10071.t1.exon2;Parent=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 17085 17208 . - 2 ID=cds.g10071.t1;Parent=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS exon 16705 16774 . - . ID=g10071.t1.exon3;Parent=g10071.t1 NODE_542_length_21521_cov_41.3826 AUGUSTUS CDS 16705 16774 . - 1 ID=cds.g10071.t1;Parent=g10071.t1 #PROT g10071.t1 g10071 MTRGNARDLAREKTLKKQQDLKKSQAASDKDGNKGLTLEQRKARDAEIMRLKQLKKIEDAAASAAK* # PASA_UPDATE: g10067.t1, single gene model update, valid-1, status:[pasa:asmbl_8069,status:12],[pasa:asmbl_8072,status:12], valid-1 NODE_542_length_21521_cov_41.3826 . gene 7360 9694 . + . ID=g10067;Name=g10067.t1 NODE_542_length_21521_cov_41.3826 . mRNA 7360 9694 . + . ID=g10067.t1;Parent=g10067;Name=g10067.t1 NODE_542_length_21521_cov_41.3826 . five_prime_UTR 7360 7380 . + . ID=g10067.t1.utr5p1;Parent=g10067.t1 NODE_542_length_21521_cov_41.3826 . exon 7360 8282 . + . ID=g10067.t1.exon1;Parent=g10067.t1 NODE_542_length_21521_cov_41.3826 . CDS 7381 8282 . + 0 ID=cds.g10067.t1;Parent=g10067.t1 NODE_542_length_21521_cov_41.3826 . exon 8530 9694 . + . ID=g10067.t1.exon2;Parent=g10067.t1 NODE_542_length_21521_cov_41.3826 . CDS 8530 9388 . + 1 ID=cds.g10067.t1;Parent=g10067.t1 NODE_542_length_21521_cov_41.3826 . three_prime_UTR 9389 9694 . + . ID=g10067.t1.utr3p1;Parent=g10067.t1 #PROT g10067.t1 g10067 MSPSSTSSAAESSAGFLVAPFVGLLRIIGMRGPRVIAGAFALVLFVAIVATPAFLAHSQPPPLPEGAGDRAMQTTRHLRDFTTGGAMCPTPQPEINTTLLTKEFAFHGHPVYSAFYAALRSYKLREGTLSPRPARGKHQWPLFVITRQNFALSSSAIADIQKDIEVAHASAKVPGTPLINFVEGVYNSIAGSKAMQVITKRQLALRDGCSFESIGLQPTTFVTFDSGECGLLKAGMAKNKLYIIKPSTGSKGQGIQVVRGTTETMRILHEKVCIVKTTPTVVIQEYLLDPLLIKGAKFDLRAYMLIGSTRPFTVFVRPGYVRRSLTPFDPRATQLKAHLTNTHVQQTLRGYDGGEHVWSMERFRAYIEGPQGGAPKGWVDGVLVSHMARVGRMLFESARDTLQRRRGAFHLIGLDFMVDRHFGIHFIEANSAPGMGYQAPWKAQLSRMLSRDMFGLVHSLQARPSSMVHLKEGDVASGFTLVYSERLDMCAARGEVPPAVAADASSRKYNVCAEFGAPMGIGPDTPGVIFSSGAVLDASMMAGEEDGDDEEGGGGGGGTDTDSSGADSSSGSEEAAAALEAQVEAR* # ORIGINAL: g12066.t1 original gene structure, not modified by PASA NODE_1658_length_9944_cov_41.2272 AUGUSTUS gene 6518 7069 . - . ID=g12066;Name=g12066.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS mRNA 6518 7069 . - . ID=g12066.t1;Parent=g12066;Name=g12066.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS exon 6518 7069 . - . ID=g12066.t1.exon1;Parent=g12066.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS CDS 6518 7069 . - 0 ID=cds.g12066.t1;Parent=g12066.t1 #PROT g12066.t1 g12066 MAQDIKVSQDIQDAITSKLSSAATAEQGFGSIGVAMSKNSTYISNLVQKNFTTRTIQDCLSNVSAKQSFVIEGSNNDVKDQKLDYGVDLKQTCPQMNNAVTNFVNTLNNDSSTTSTAKTQGLFDALGALFSSPFFLLLGGILAIVLVIYVASKAFGGGGSDGGDDGGGGGGGGGGGGGGRRYQ* # ORIGINAL: g12065.t1 original gene structure, not modified by PASA NODE_1658_length_9944_cov_41.2272 AUGUSTUS gene 1170 1595 . - . ID=g12065;Name=g12065.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS mRNA 1170 1595 . - . ID=g12065.t1;Parent=g12065;Name=g12065.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS exon 1170 1595 . - . ID=g12065.t1.exon1;Parent=g12065.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS CDS 1170 1595 . - 0 ID=cds.g12065.t1;Parent=g12065.t1 #PROT g12065.t1 g12065 MINGVPKRVHIVAHAQSLANARSHMWQHIEEYFEYEVGKKWAEDMELKRETGPYAVKHSDDDVTIRWVVTTPGFVYSSISEDIKFRMTIVEYSIGTAHVIAPRETSAPTVDLQASRSKDTSGNMCLVIRELREKQEKRGKN* # ORIGINAL: g12067.t1 original gene structure, not modified by PASA NODE_1658_length_9944_cov_41.2272 AUGUSTUS gene 7338 8897 . + . ID=g12067;Name=g12067.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS mRNA 7338 8897 . + . ID=g12067.t1;Parent=g12067;Name=g12067.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS exon 7338 8897 . + . ID=g12067.t1.exon1;Parent=g12067.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS CDS 7338 8897 . + 0 ID=cds.g12067.t1;Parent=g12067.t1 #PROT g12067.t1 g12067 MANPAGWRCVAIIALIVAAQSANITVHPAFINNGDYVDVRWNFLAEDSDWIGLFTLGDDRPFDVYNPLDEVTQLTVKLFNLGSNYAFRYYRNESMLAESQVHVDLYEVLQVRLALTGKENEMRITWITRLNISHPIKVALANGEPTIDVTVTTYGSEDLCEVDTSATGFRNPGFIHTATVSRVACHGCVEACVYTIGSRSGSFRLGNPSEVHFVALADMGTNFRPTFWNHPGAIHTMHMIANDPLTDFVIVPGDLSYAVGHGHLWDYWDTLIEPYASKVPNMIGVGNHEFDWPTKDTNPVWGTHGTDSHGECGIPFERRYSMPTGGNGNYWYSFDYSVVHVVMISTEHDVRPGSAQYEWLAKDLGRVDRSKTPWVIVSGHRPLYLGETGQDFDVMVSLLLRDALEDLLYLSKVDFVIVGHVHSYERTCPVYRGVCTEGAPMHMIVGTGGATVETGEFVPKWAVAGTNEWGVGKIHATKSALVFEFVFPNGTIHDCAFRRAPRATGGSTGDVPIGCSEVF* # ORIGINAL: g12064.t1 original gene structure, not modified by PASA NODE_1658_length_9944_cov_41.2272 AUGUSTUS gene 284 1108 . - . ID=g12064;Name=g12064.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS mRNA 284 1108 . - . ID=g12064.t1;Parent=g12064;Name=g12064.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS exon 284 1108 . - . ID=g12064.t1.exon1;Parent=g12064.t1 NODE_1658_length_9944_cov_41.2272 AUGUSTUS CDS 284 1108 . - 0 ID=cds.g12064.t1;Parent=g12064.t1 #PROT g12064.t1 g12064 MAQILEINKTEHSAQVKMTQIPHPGAAIQLADHNANAIMRHVNKWLEKFLKTISESARESHVQMFNELFTYLKHCIVVLQIEEECFATINFAKYPVEFREMFAWLVGIPVRSQFGLTRVYFRKRFFIELNHCLFQMGIGAPRVCKFVCEGRLTECDGKCNEIHSWNACGRDGPIDGVGFNRGHANCLGCIKHNVLEMLSPYATPNADVHSPSACPISAASHCTGEIICVPCFELSTGMFNHADKAALTELWIRLSGTVHHSHEKHSWEEMREFI* # PASA_UPDATE: g12290.t1, single gene model update, valid-1, status:[pasa:asmbl_5550,status:12], valid-1 NODE_3093_length_4337_cov_54.142 . gene 1577 4222 . - . ID=g12290;Name=g12290.t1 NODE_3093_length_4337_cov_54.142 . mRNA 1577 4222 . - . ID=g12290.t1;Parent=g12290;Name=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 4057 4222 . - . ID=g12290.t1.exon1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 4057 4222 . - 0 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 3743 3837 . - . ID=g12290.t1.exon2;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 3743 3837 . - 2 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 3323 3481 . - . ID=g12290.t1.exon3;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 3323 3481 . - 0 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 2861 2947 . - . ID=g12290.t1.exon4;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 2861 2947 . - 0 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 2627 2690 . - . ID=g12290.t1.exon5;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 2627 2690 . - 0 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 2115 2451 . - . ID=g12290.t1.exon6;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 2115 2451 . - 2 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . exon 1577 1900 . - . ID=g12290.t1.exon7;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . CDS 1669 1900 . - 1 ID=cds.g12290.t1;Parent=g12290.t1 NODE_3093_length_4337_cov_54.142 . three_prime_UTR 1577 1668 . - . ID=g12290.t1.utr3p1;Parent=g12290.t1 #PROT g12290.t1 g12290 MHFGNSQNIYKLFDKLLLLSEGRTVWFGNAHEALPFIEKSTNTVCDGQTNPADYFLDVVHGGAEAAERMTNLYSQTPQAVSALKEIEDIQMGRGKYLGLPDPSSYGEYASSFFAQTGTLISREFLSTLRNPKLFWTQMFQAVTFSIIMGSLWSELKIDPDNPLSFYLNQLNSIFFVIIYLSLMCFSAAPHLIMFRRVFNHERQSGSYRTSSFLIAKATVDIPLYAIVGAVFASIVFKFVGLHASTYPFFLLTSVLIIVCGCSSIQFVSALSSNIEVAMVISTFINGMSIVFAGFYVTYANIPAWWKWVYHISYLHYGFAAQVTNQYERRPEGGAVMSYVFGQETAPLDKWICLYILVGMILAFRTLTYIVMRFSRPTNN* # PASA_UPDATE: g12289.t1, single gene model update, valid-1, status:[pasa:asmbl_5549,status:12], valid-1 NODE_3093_length_4337_cov_54.142 . gene 102 1118 . - . ID=g12289;Name=g12289.t1 NODE_3093_length_4337_cov_54.142 . mRNA 102 1118 . - . ID=g12289.t1;Parent=g12289;Name=g12289.t1 NODE_3093_length_4337_cov_54.142 . five_prime_UTR 1089 1118 . - . ID=g12289.t1.utr5p1;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . exon 885 1118 . - . ID=g12289.t1.exon1;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . CDS 885 1088 . - 0 ID=cds.g12289.t1;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . exon 305 433 . - . ID=g12289.t1.exon2;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . CDS 305 433 . - 0 ID=cds.g12289.t1;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . exon 102 177 . - . ID=g12289.t1.exon3;Parent=g12289.t1 NODE_3093_length_4337_cov_54.142 . CDS 102 177 . - 0 ID=cds.g12289.t1;Parent=g12289.t1;3_prime_partial=true #PROT g12289.t1 g12289 MAALAVRIAQATRAIAVSGLSKSVVATTATMSTSASSSGSVKRSAEGAVIIDWKDLNADSTNLNDSIAEAFGSAPDCLGIILVSNVPNFVERRKTLLPLAAQYAALPEDIKAKTTHEESKYSFGWSHGKEKFNGIP # ORIGINAL: g10336.t1 original gene structure, not modified by PASA NODE_2475_length_6126_cov_39.0981 AUGUSTUS gene 456 1761 . - . ID=g10336;Name=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS mRNA 456 1761 . - . ID=g10336.t1;Parent=g10336;Name=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 1659 1761 . - . ID=g10336.t1.exon1;Parent=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 1659 1761 . - 0 ID=cds.g10336.t1;Parent=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 1083 1490 . - . ID=g10336.t1.exon2;Parent=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 1083 1490 . - 2 ID=cds.g10336.t1;Parent=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 456 649 . - . ID=g10336.t1.exon3;Parent=g10336.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 456 649 . - 2 ID=cds.g10336.t1;Parent=g10336.t1 #PROT g10336.t1 g10336 MADSDSSEEFLPFQGSDEMPDDVAAPDNPIPFTIVNSKPLDGTPFVAPYLPCPPEIVRQAIEFACVAPGDVLIDLGSGDGRIVFDACKHFGVSGVGVELDPYLAEFARKTAASSGFAPPATPSASFVEGDIFDVDLCTLSPSPTVGVLYILPRGLGMLRNQLKAWLAASEAHRVVTINYAIPEWVPMRASTVMPNSGIEMVLHYYTSLSSALVDEDATVATHGAPAEAAGNQPL* # ORIGINAL: g10338.t1 original gene structure, not modified by PASA NODE_2475_length_6126_cov_39.0981 AUGUSTUS gene 3742 5913 . - . ID=g10338;Name=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS mRNA 3742 5913 . - . ID=g10338.t1;Parent=g10338;Name=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 5847 5913 . - . ID=g10338.t1.exon1;Parent=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 5847 5913 . - 0 ID=cds.g10338.t1;Parent=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 4915 5749 . - . ID=g10338.t1.exon2;Parent=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 4915 5749 . - 2 ID=cds.g10338.t1;Parent=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS exon 3742 4654 . - . ID=g10338.t1.exon3;Parent=g10338.t1 NODE_2475_length_6126_cov_39.0981 AUGUSTUS CDS 3742 4654 . - 1 ID=cds.g10338.t1;Parent=g10338.t1 #PROT g10338.t1 g10338 MGFVYLTFFVPLLHSLPTNTYDQVRLHPIGLSGAHRFVVHTVQLLPQRSFRDNEYESTTMLNEGGAASVHLFPVVAGATLEVCIAKWWAALGTARVRVTVAFHGVVPSTGTGDILLQGARAVTRVELRAPLRAVDVSPTANLKQWVQVVRPTEAKVSPLSPTRDVLPCERQIYQLVLSYAFTQSESSDVTPYAAMLNEFLYESEYEAQFWVICDANKRAVAYGDAFPDHYTAKLDKGDYVLRLQVRHDRPDLLDKLKELPIALERPLGSGKEIAVDIYADMSKAMTAGAKSKQRLLRKGDRMCVYLSAPPNDKLPKDFKAGDYLRGLVTFAKPPTATGGASAPARVAAYPIVYHPAVSSPAKSPASGSSADADETPKAEDLLRDARVAVLAKLQGDDHARLSKELLDTHAKHLPLLTHLLQVAEDKSEAGEARLAAVTRAADAVVSAIDTNELAAHYGANIDTTNAEQARSRKEMDKRKEALVDALHRKARQIGDAAVASSDAEQSRDLAAQLDAAVAELSKWAPATETRLLYLNVVRERVQGNYALALRALAKYVASASPTEASSKRIADLRTDLIEKLGWTHISSQERKWMLVKYPAKYPMF* # PASA_UPDATE: g10337.t1, single gene model update, valid-1, status:[pasa:asmbl_4395,status:12], valid-1 NODE_2475_length_6126_cov_39.0981 . gene 2019 2915 . + . ID=g10337;Name=g10337.t1 NODE_2475_length_6126_cov_39.0981 . mRNA 2019 2915 . + . ID=g10337.t1;Parent=g10337;Name=g10337.t1 NODE_2475_length_6126_cov_39.0981 . five_prime_UTR 2019 2271 . + . ID=g10337.t1.utr5p1;Parent=g10337.t1 NODE_2475_length_6126_cov_39.0981 . exon 2019 2496 . + . ID=g10337.t1.exon1;Parent=g10337.t1 NODE_2475_length_6126_cov_39.0981 . CDS 2272 2496 . + 0 ID=cds.g10337.t1;Parent=g10337.t1 NODE_2475_length_6126_cov_39.0981 . exon 2843 2915 . + . ID=g10337.t1.exon2;Parent=g10337.t1 NODE_2475_length_6126_cov_39.0981 . CDS 2843 2896 . + 0 ID=cds.g10337.t1;Parent=g10337.t1 NODE_2475_length_6126_cov_39.0981 . three_prime_UTR 2897 2915 . + . ID=g10337.t1.utr3p1;Parent=g10337.t1 #PROT g10337.t1 g10337 MVTKAAQWLITAVVFGTTWAAAMCECVPLSPQVRSIVPYLPIYALVAFGSYALATVGYRLWTFNDCPEAAAELRKQIDEAKVDLKRKGFKFD* # ORIGINAL: g220.t1 original gene structure, not modified by PASA NODE_4846_length_1204_cov_31.5412 AUGUSTUS gene 120 236 . + . ID=g220;Name=g220.t1 NODE_4846_length_1204_cov_31.5412 AUGUSTUS mRNA 120 236 . + . ID=g220.t1;Parent=g220;Name=g220.t1 NODE_4846_length_1204_cov_31.5412 AUGUSTUS exon 120 236 . + . ID=g220.t1.exon1;Parent=g220.t1 NODE_4846_length_1204_cov_31.5412 AUGUSTUS CDS 120 236 . + 0 ID=cds.g220.t1;Parent=g220.t1 #PROT g220.t1 g220 ADIEAVMARYSINASLVDEIARLKEENRRLRMGSSFAL* # ORIGINAL: g11602.t1 original gene structure, not modified by PASA NODE_3968_length_2429_cov_34.2842 AUGUSTUS gene 103 1926 . + . ID=g11602;Name=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS mRNA 103 1926 . + . ID=g11602.t1;Parent=g11602;Name=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS exon 103 646 . + . ID=g11602.t1.exon1;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS CDS 103 646 . + 0 ID=cds.g11602.t1;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS exon 903 985 . + . ID=g11602.t1.exon2;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS CDS 903 985 . + 2 ID=cds.g11602.t1;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS exon 1255 1440 . + . ID=g11602.t1.exon3;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS CDS 1255 1440 . + 0 ID=cds.g11602.t1;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS exon 1825 1926 . + . ID=g11602.t1.exon4;Parent=g11602.t1 NODE_3968_length_2429_cov_34.2842 AUGUSTUS CDS 1825 1926 . + 0 ID=cds.g11602.t1;Parent=g11602.t1 #PROT g11602.t1 g11602 VEVSPITQLRFAFELKTKKCTYLIETENEGERAGWMSAVSRAKEQSLLSPHVAIIASNSQIAQSGDGLAQQHNSAGGELAAPQNVTQRSTSHQPPASVSTSIPSQHSLQQSMSHPVHPVSVTASAASSASASTGAAVEGGASTATDGTTSNRGSQHSHTSAHSQHRQSSLTSAGPVAKIEDDYHVHKEDLLGSGQFGVVVGGVDKTSGKIVAVKMIERRRMSKENGSSASTSASFRNEIAILQKLRHPGIISLLAMYESHEKIYLVMDRVQGGDMLDCILNSPPGRLSERTTRFLVYQILVSLR* # ORIGINAL: g13869.t1 original gene structure, not modified by PASA NODE_758_length_18054_cov_40.6036 AUGUSTUS gene 16500 17844 . - . ID=g13869;Name=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS mRNA 16500 17844 . - . ID=g13869.t1;Parent=g13869;Name=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 17681 17844 . - . ID=g13869.t1.exon1;Parent=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 17681 17844 . - 0 ID=cds.g13869.t1;Parent=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 17148 17400 . - . ID=g13869.t1.exon2;Parent=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 17148 17400 . - 1 ID=cds.g13869.t1;Parent=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 16500 16661 . - . ID=g13869.t1.exon3;Parent=g13869.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 16500 16661 . - 0 ID=cds.g13869.t1;Parent=g13869.t1 #PROT g13869.t1 g13869 MFLQHARLSNKDLLLLHGYALPDNTDDSYEITLTVRDVPLSSQQKELLVRRKLLGADHVFFLRPKSLPFDPALIYFHTVVSALPELVGTSAYDDIVADLDSLNTSDAHAPFQLRVHRIVAHKLREMAGGLVAGMGTPRAAVYKAAIQTSDTKRGVKYVDIARDFVPLPNPPHADASNAVQNGDALTQGREEL* # PASA_UPDATE: g13867.t1, single gene model update, valid-1, status:[pasa:asmbl_9225,status:3], valid-1 NODE_758_length_18054_cov_40.6036 . gene 9461 12868 . - . ID=g13867;Name=g13867.t1 NODE_758_length_18054_cov_40.6036 . mRNA 9461 12868 . - . ID=g13867.t1;Parent=g13867;Name=g13867.t1 NODE_758_length_18054_cov_40.6036 . five_prime_UTR 12786 12868 . - . ID=g13867.t1.utr5p1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 12552 12868 . - . ID=g13867.t1.exon1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 12552 12785 . - 0 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 12188 12293 . - . ID=g13867.t1.exon2;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 12188 12293 . - 0 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 11954 12005 . - . ID=g13867.t1.exon3;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 11954 12005 . - 2 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 11589 11709 . - . ID=g13867.t1.exon4;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 11589 11709 . - 1 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 10818 11253 . - . ID=g13867.t1.exon5;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 10818 11253 . - 0 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 10385 10567 . - . ID=g13867.t1.exon6;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 10385 10567 . - 2 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 9779 9939 . - . ID=g13867.t1.exon7;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 9779 9939 . - 2 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . exon 9461 9589 . - . ID=g13867.t1.exon8;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . CDS 9509 9589 . - 0 ID=cds.g13867.t1;Parent=g13867.t1 NODE_758_length_18054_cov_40.6036 . three_prime_UTR 9461 9508 . - . ID=g13867.t1.utr3p1;Parent=g13867.t1 #PROT g13867.t1 g13867 MSTQEESSALPLALATLAGAAAIGIFFLWRRSSKEAKVEPQKSVNSGANAVKPGVPQEKKSEKKKADAPKGSAKAIAKKEKHPLEYAVLKGHTEAVKSIDFSLDGRFLASVSVDRTVRLWYTSSFAEANHRSVRINLDTDHASCVAFSPDSQYILVALAESGVVRVYKLGKKSEKNEYVDAATVKLAREFPRAHSAEMLSLHVARNGRFVLGAYADTTLVLWSVKGDVLEKLDSKQMTNNCATISPDGRFVACGGFTPDVKIWEVRFDKSGGYEKTARAMELSGHTSGIHSVAFSLDTTRAVTLSKDGTWRLWDINVNYELRQDPKLLLTSACASGVRRGCVALSPDASMVAAAVDKSLRLYSADGKLLEEISDAHDGAIEAVIFDVNADFLATSSSGERHVRVWQNNPILKIRLIDLKFKLNSATNDLYKQRLRQQVAETEGLIRTREAEAVGTSK* # ORIGINAL: g13866.t1 original gene structure, not modified by PASA NODE_758_length_18054_cov_40.6036 AUGUSTUS gene 2 9155 . + . ID=g13866;Name=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS mRNA 2 9155 . + . ID=g13866.t1;Parent=g13866;Name=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 2 318 . + . ID=g13866.t1.exon1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 2 318 . + 0 ID=cds.g13866.t1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 619 877 . + . ID=g13866.t1.exon2;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 619 877 . + 1 ID=cds.g13866.t1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 1187 3010 . + . ID=g13866.t1.exon3;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 1187 3010 . + 0 ID=cds.g13866.t1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 3160 5192 . + . ID=g13866.t1.exon4;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 3160 5192 . + 0 ID=cds.g13866.t1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 5423 7749 . + . ID=g13866.t1.exon5;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 5423 7749 . + 1 ID=cds.g13866.t1;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 7984 9155 . + . ID=g13866.t1.exon6;Parent=g13866.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 7984 9155 . + 2 ID=cds.g13866.t1;Parent=g13866.t1 #PROT g13866.t1 g13866 VSVRLSSFDVAFGGDHSASASASASSGADTEEPPLHFITRVTVDASYTRDGGVSAGILARSARLEERGGRFVRVLVQPFNATCTATVEGGSAQYTVGIGSLIGGLRYTHLKTFVAVQSALTAAFASDGLAVPCLVFTRIAAPDDVGASFWRPTVPHGCVFVGDVVGDGGSHEAPPKEVLVFADSADGSFARPKGFHLEWSDGASFSLWSPLAPDGYVALGCVASNSLAPPELQALRCVSERIALPGRAHAANSPTAGVSRDHSIRGTGHTTPVPARGTPAALARSVDLPRSSSTSSFKNISSPASVKSADFASTPSSTRAAGGAAVQPPGLWVVQGESRTFVVARGAEMPDPTTLRVTRIAAATARRTGASRRSTSAAVGISSRRLLRPASDFTLVCSEPNALCKRKVSVWRPVCREGEVFFGDCAVADRKKPAVCLVARTDADADADTFRPPVRFERVWSDAGPKSRDACSFWAPIPPEGYVALGCVASEGGVNPPDVLSTLRCVRADAEWDFAPVTGLLWDDSGSRADADCSLWGIDNPLASFLAHARHVRPSDVFCGNDAFSTGIFAGRVTSEVAVLLSGMSLAITDDAPRRPQLPFCELSVAAVELRARASGTVLKARGSVEGVEVAVYNPRRSAWEPVVERLSFGVLARLPIGGTDDVAQSASSPDSCSTADAFVRHNAFVSVQTSGAVLVNAAQASMRTIVGVLPAWVADLRPRPDADSGGVPSACVLENRTVCTLEARFLRGDGATVRDGVMLHPGLSVNVVADISPAREGLIAGGSDECSVEAVAVHLTELELSGAGHVTEVILVAGVKRKGDAHMHCTHASTPCHVTDGTVTTSSVAFSLALPPIHEELILTIFVHDWRSAIASMGDTSSRVAQDDDMLPPPLVQFDIPLALHSAPSATGAAQNPLSLDNVDVQMWTATVVAPEENALSVSARLVGSMRCFLGPVTSAGSEVKGRYVDVGMQGYTGAKMPAFVCFRVPSVETGAVSGAQSPAEAEWSDPIDLKPGFGRSLVSLATMSPTAGDAQDSGRPALVFDHVPGTGAFRIRHNCITMNVTQHDVEVFAAPNDEQPIVRIPRGGIAVAMPTALFSRQGYAAVAGAPTDAHRFPIGPFGVMQKQIAAKLPTTHADGARIHCTIRTRELRLGDWSDFAVTLQPPLRFENLLPVPVGVHVLSSGVGAVGRHVAATLSVQAGASVHVDCADASGGAVSAVVVPEGPYRFADQPVFELLPSSLPTASVRRGSSAQHVTTAAPVVVDDKLKLELFDEQKRKVVLRTQREIDADDIPSFCVWASTWLVNDLSVPVHWRSANDEDMGTCPAAPDATLRERSNTGLRNVGVSARAHPLLFAECEWDRDALTSVIVPQLDGCERSDPISLSVLGSLGNFQSKSLQTGAVFDVGVSVTYGPAPYVRTRVLTFSPRFILRNTSNLPFEIRQFGTDRAVAVGEGCVSVFHWALEDGAAAVQLKVEPFEWSPPFCPDVLGTTRIPVRLADSLDSAVPTAVVGVDVAFNGRTFEVKLAGPDEEMPFIFRNNSEHVVRFRQPPPPPLTEGGDDDTSPLAALSAVAYGREWCVVVPRGALPFALERPIDPRLLEVVIEAPEFRDADDGVMLVDPNAKGEDFVLESKRLSFTLTVAVEGAVSALVLRRNAVSVARGGGGGMPASASQAALDSTDDGVVALMPTYEGVRFIAVVSDIGLSIVDDEPEEVIFMRALGIIADYGPVVPGTSEMVLSGTYGRRSLQRAELSIREFQADNQLMDPIFRVMGHATPPNSAPFLWLLATLPPPSSLVGPADAPAEMCLETLACAVNDLNAAVDESLLECLVGIAMSVVPEDTDEGEKKPPSTVKIAALRFLKMMVTLSFQVDESRKTLGRSMPILAALGTTLGSFRDSQINFDQIEMAHIDMPLPDLIELIVRHYVSHVSNALVGVLISSELLGNPRALVGSMATGVRDLFGRPVAGAIDGGASGFGEGLVQGGRSLVKGSASVFGAFGKITGSVSRGVAAITFDDDYMAARKKRTAARPVAGAGATAAAALSTSLMDAVTGIVMRPVVEGRKGGVGGFFKGLGQGVVGIVAKPIAGILESVSAANEGLHKTIVGDNTKACIRLPRTFGMDNELVPYDANAAYGSALLKHCASETFAVTDKHVYHFDLPRERVLILTNHRLLILPRPVDPTVGDQPHIAENWSNVFACELTDAGTVVHIHLKRPSYAMYLNEKTRELRIRVFAGNSELVIKKIDSLILRAHRVSDADDATPKSVMFLPVWSDKGGTFKTHVSIWRPVPPPGHVTFGDCIVSGYAAPSSRVAVALEVPEDDLYAPPVGFDCVWTDSGSRATQDCALWMPIAPDGYVALGLVTSASHALVPSIPELRCVRRDLAIASGFDEQVWDTTGSRCARHCTLWTVANEAGTFLASTPQQRPSATRAFAVASRRPPTGSNRSNRGGALGPQNSLVVRSPQPSGLVAPMRLITRDFTCLWSTEGSPVTESVWLWRPCAPQGYVILGDCVTRSKTPPKDGALVVAEEGLGFLARPERYELVWKDMGSRARGNCAIWMPVAPTGFVALGCIVTGDYAYPDVPDFRCVKRSVLRQTNISAKVWTDGGSGAKWDCAIWAVANAALTFIAVRSHDEVPPDTLAYDGKEGL* # ORIGINAL: g13868.t1 original gene structure, not modified by PASA NODE_758_length_18054_cov_40.6036 AUGUSTUS gene 13221 15933 . + . ID=g13868;Name=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS mRNA 13221 15933 . + . ID=g13868.t1;Parent=g13868;Name=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 13221 14387 . + . ID=g13868.t1.exon1;Parent=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 13221 14387 . + 0 ID=cds.g13868.t1;Parent=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 14842 14996 . + . ID=g13868.t1.exon2;Parent=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 14842 14996 . + 0 ID=cds.g13868.t1;Parent=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS exon 15327 15933 . + . ID=g13868.t1.exon3;Parent=g13868.t1 NODE_758_length_18054_cov_40.6036 AUGUSTUS CDS 15327 15933 . + 1 ID=cds.g13868.t1;Parent=g13868.t1 #PROT g13868.t1 g13868 MVRLRAASVARTAASAVQSHVSPTAVQSTHASPAPTAASQTGVGATAAPLNHVTPSGRKRSNLPGVLLQTGKDEFVKRRERDIFGQTVDGKATALWMSRNDHTDQAAVKAAWAKVNAFAPRPAERHVTTTSDAASPEDAAAVVAGNKKGSVARIVPIDLEVIPRGMPPLVPGALVDVMSAAGDYLATGFYERVVGELELAADAVDGEELPGDAVSGAAGQKQPKSAAKGAKLPNVTEAPTPAKPVVATSRNDVTVLSFSPLKKVDSAFWEARLQRAIDFRHNHGLVVGGGGGGGETNAFRLVNSEADEMPGCTIDMFAGTAVLRTTSLGMHLSKPSIVKALRTLLGSKLDGVYDKGSFVYGVSAGDNIDFDALPPSQGYLFGMGDGTKEIVENGRKFHVDYAGHGTQSGFYLNQRESRRLFTEYSAGRRVLDMYCHTGGFGVYAATSGAKSIDAVDIASPALKEYRRNLALNIGEERLSVGNASADNGSVGVRFISRNAFAFMRNKLPFGDGKARTLFDDAESKRSSQSASRSQTQPLEYDLAVIDPTFVGSGIKDKKRICEQITAINAASMRCLARDGVLFTFVSSHVISHEDLRGAVLAGAINANRSVRVIRRLGAPPDHGPCLQTAHGEYLKGMVLEIN* # PASA_UPDATE: g930.t1, single gene model update, valid-1, status:[pasa:asmbl_3122,status:12], valid-1 NODE_1963_length_8320_cov_34.1886 . gene 800 7734 . + . ID=g930;Name=g930.t1 NODE_1963_length_8320_cov_34.1886 . mRNA 800 7734 . + . ID=g930.t1;Parent=g930;Name=g930.t1 NODE_1963_length_8320_cov_34.1886 . exon 800 3899 . + . ID=g930.t1.exon1;Parent=g930.t1 NODE_1963_length_8320_cov_34.1886 . CDS 800 3899 . + 0 ID=cds.g930.t1;Parent=g930.t1 NODE_1963_length_8320_cov_34.1886 . exon 4084 4210 . + . ID=g930.t1.exon2;Parent=g930.t1 NODE_1963_length_8320_cov_34.1886 . CDS 4084 4210 . + 2 ID=cds.g930.t1;Parent=g930.t1 NODE_1963_length_8320_cov_34.1886 . exon 4581 7734 . + . ID=g930.t1.exon3;Parent=g930.t1 NODE_1963_length_8320_cov_34.1886 . CDS 4581 7734 . + 1 ID=cds.g930.t1;Parent=g930.t1 #PROT g930.t1 g930 MKTDSKRRVRIFDRRQKQSSVPVAVAGPDAQPDGRNDDKFPSDGSAVPESASAIPAWNDCLQGTVQYRWDQKPANFGDIGWAWNTKKGCVRNQIVDGRQVRFTVYRECNGALACTVDKCNTVVRPKQDAAKCKEQLQKLTCRVHGKPLKHVQCTGTSFWFGSAKDTDGEQCAPYVAVHIGTHNHPMPFRTRITKEARDFMSTRLAHGATLGQIHIGQSSDKKSPMRALAEIDIAAGNRKRVKNLAFRLKQKTAAASGQKGEQLAHRLPTKEQDAVFRIMHGKGGVFSTKPLKKYVRADMAVMFFQSTAMKRAFIRSAYETMSLKRGVSDTADDSDEEWTFTPAHESSATESDTEPTVTNDGHTKAGAPTNRGGKETRTYHSGRTRASTAALAKKPKEATEDPMHASATDTAMDVVSATSTVAGQRRTRASTAALAKKPQNATEDPAHASATDSATHVVSATSTVAGQRRTTASTAALAKKPKEATEDPTHASVIDSTMDIVSATSTVAGQRRTRASTTALAKKPQNATEDPVHVSATDSAMHVVSATSTVAGQRHTTASPAALEHKPQKAEDPAHASATDSATHVVSATSTVAGQRHTTASTAALDHKPQKATEDPAYAFATDSAMHVVSATSTVTGQRHTTESTAALAKKPKEATEDPTHTTAMDGKSTLAARECHTSASNCIDTAATATHTSATPVYHGFRNEGGWTCAVDAELEPLMALCDTNDRIFDIVKGATLRTDSDSTMCALYRLLCKHRELHAAGCLRPGSPQAIESMAILVNGRRSLIDALCAGMHMIPHQWCDPACLWPGLIASAAKRCTATKELFGLTATAYATCANCNSCTMPVKVSGGALPIFVSALSVTSAAMDLNEILRDRPEAWICHGKTVYCLSCKRWTDVTIPLEPPPTFLSAPWILHVILRTDDQRLGSSDGSLVSLPRLITLGRCMDGDGIAKPVTYRLVARILGLDTHFTSKFERDGHVLQHDGLGSFDGACTLESTCNRLDGVMKDSRMAIYVRISGDSQPTVHQNNVSPKVSAITIRERSRMLSDLTKDFQHLLSEDKKQRRALDKELYGWRRHFSHINENNLDGADNNTSYPADVDWDPDATAQYADGASEGVHKDKRRKINVEDTDATALTQRTDSASEESVHNNNRRKTVVVQDLDATAQRTDGASDKSVHKDKRRRIDVEGLDATEQHTDSDSLRKGNWPDGAMWHKHKRCKIGIDWDPGVTAAAAQHIHGASLDGGSLDVGVHTAEIRRSTRTEDAEVHAAAQHIHGASLDGGSWDVGVRTAEIRRSTRTEDAEVHAAAQHIHGASIDGGSWDVGVRTAEIRRSTGTEDAEVHAAAQHIHGASIDGGSWDVGVNTRKNDAATNVTDWQTNDDLNIGNYTNADDDTIEGYSASSNVRLPDALKSETYQSGRATDKENTASSWKRALEDRGTAADDGDRSDACESSTDDTDEDKQRNSKAHKEKYERHKHGNFGFQSDQTYKTILNAYLMVTVVFCPIIQRFRPVAFAVMFGQKRCHYREYFSRLLAVLPNHIMCDRDKAMRACATTMDFSLAQAQGFVGAYALRRRNALRAYGQQVPSRNDLEREGWDCINGCSFHLNKSVEGLLQDLELSEDDSNVFRSCVRWLRKAKTPQEVDQAAIRLEAAFPACRNWLKWCMQDGISSMAFPGMSRMDPTLRAKLATTTNGTEGTHSRANETGGKRHSIIRGMVAYARFANTFERDERRVAAGDITISNPSCDSRPQKKRNPKPARRFGGPIRQGVIRSDIPPEKGTAKTRGAPSKRQATKHAAPPGIVAVTTTTKGREVSSSTTGGEPTGIANFGNSCFVGVVFQVLFSLGYIRRAVKEVACSASAKPFIRNLEPIFNALDVSVPVLSAEDARGLFWNLVGVLDGPFAKRIAGGKKQQKCLHQQDASEFLGGLFLQLQQEGVGVGKFNSCITSSTCCKGCGRSSVNNDDTDVSILSLSLPASNGTSASAAISLTNLLEEFEKPEYMEAQERWNCETPDCNGLSVKTLTVHAGRTITFLVKRYQAAAGKDSCSVAFPVILLLKTAPISSELQKYKLWSIIYHHGPSLNNGHYTATCRRDDGHIYHFNDEKVTKPDTFDDAEHHGTPYLITYTRCE* # PASA_UPDATE: g12445.t1, single gene model update, valid-1, status:[pasa:asmbl_6037,status:3], valid-1 NODE_3414_length_3522_cov_33.0833 . gene 347 2495 . + . ID=g12445;Name=g12445.t1 NODE_3414_length_3522_cov_33.0833 . mRNA 347 2495 . + . ID=g12445.t1;Parent=g12445;Name=g12445.t1 NODE_3414_length_3522_cov_33.0833 . five_prime_UTR 347 734 . + . ID=g12445.t1.utr5p1;Parent=g12445.t1 NODE_3414_length_3522_cov_33.0833 . exon 347 1569 . + . ID=g12445.t1.exon1;Parent=g12445.t1 NODE_3414_length_3522_cov_33.0833 . CDS 735 1569 . + 0 ID=cds.g12445.t1;Parent=g12445.t1 NODE_3414_length_3522_cov_33.0833 . exon 1759 2495 . + . ID=g12445.t1.exon2;Parent=g12445.t1 NODE_3414_length_3522_cov_33.0833 . CDS 1759 2390 . + 2 ID=cds.g12445.t1;Parent=g12445.t1 NODE_3414_length_3522_cov_33.0833 . three_prime_UTR 2391 2495 . + . ID=g12445.t1.utr3p1;Parent=g12445.t1 #PROT g12445.t1 g12445 MLFAARHRQSIALQDIDVSKIRAYNELVGVDDGLPPVAQRCVSVLKGETSDEKPPIFAKEGPSKTLYGERQWLLRHSPTNRYRVAFGEKAVTAAPAEPVDKILCARQRRLAREKKKAAEEETGLVAGPNGFQLGPQAETVLQKSHYERTNDEKRLLYRKVKHLKALSKMSSFVIEELCAVFDLLRIEEAGHVLFKQGELGTTFYVLLKGSVSVMISKTGKFADSREVVVLPAGAGFGEVALLSGERRSSSIVLREPCDFLVVEKVDYLRIMKFLHDKDVQEKQEFLRRIPIFSSWTNDQLRNVCKFISWRTFKEKDIIINEGDQAAEMFFIANGMVRVSRRLRVLKKARRPSTVSGALHIGKTVQVVMGTLSMCEHFGHCGILMRSTHTMTVEAMDETKVAVINAFNTEHFLSRVLAISPHSLKSDKEIRRIYQQHQQSAEWRKFKDAVVTQIFVEKTVRRSGLSPYGFIEFRDSALNTPEGKPSWHV* # ORIGINAL: g12446.t1 original gene structure, not modified by PASA NODE_3414_length_3522_cov_33.0833 AUGUSTUS gene 2550 3183 . - . ID=g12446;Name=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS mRNA 2550 3183 . - . ID=g12446.t1;Parent=g12446;Name=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS exon 3144 3183 . - . ID=g12446.t1.exon1;Parent=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS CDS 3144 3183 . - 0 ID=cds.g12446.t1;Parent=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS exon 2827 2978 . - . ID=g12446.t1.exon2;Parent=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS CDS 2827 2978 . - 2 ID=cds.g12446.t1;Parent=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS exon 2550 2735 . - . ID=g12446.t1.exon3;Parent=g12446.t1 NODE_3414_length_3522_cov_33.0833 AUGUSTUS CDS 2550 2735 . - 0 ID=cds.g12446.t1;Parent=g12446.t1 #PROT g12446.t1 g12446 MPAVGIVSECGAIETASVGLADCGSTLASATTATVLSKKASAAMWCDNAMSLQIDGRNATVRITVSSVAASASALEATAVAECNSLEQCRFLLARSASAYTAEASLAVQQATIPQTPCLLEAPRL* # ORIGINAL: g12897.t1 original gene structure, not modified by PASA NODE_658_length_19404_cov_41.8952 AUGUSTUS gene 2867 5219 . - . ID=g12897;Name=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS mRNA 2867 5219 . - . ID=g12897.t1;Parent=g12897;Name=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 5032 5219 . - . ID=g12897.t1.exon1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 5032 5219 . - 0 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 4691 4790 . - . ID=g12897.t1.exon2;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 4691 4790 . - 1 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 4318 4470 . - . ID=g12897.t1.exon3;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 4318 4470 . - 0 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 3954 4002 . - . ID=g12897.t1.exon4;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 3954 4002 . - 0 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 3704 3833 . - . ID=g12897.t1.exon5;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 3704 3833 . - 2 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 3428 3484 . - . ID=g12897.t1.exon6;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 3428 3484 . - 1 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 3126 3285 . - . ID=g12897.t1.exon7;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 3126 3285 . - 1 ID=cds.g12897.t1;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 2867 2935 . - . ID=g12897.t1.exon8;Parent=g12897.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 2867 2935 . - 0 ID=cds.g12897.t1;Parent=g12897.t1 #PROT g12897.t1 g12897 MCADRLAVVGVCEALAASLTATMRPVLETTAVLVDNAHADRVLKKDLGSLGAMIGKGAALFAEYGITRPDQLFQSCKAMYRFPDVRNAHDALLDAQAEWDAHLVDLEKRLNLHDVCGGAVPLGVGDVGPMDVPLVDARTGDATTLRQHVRALSQVKADIDSAGGRVIVVSFNDRIDLVRLWISETDCPFPVVSNPDLSMYRAFALKRSIARVWSADTIMYYACQKFLGHPLHRMDEHDDPYRLGGDFILDSRDGCITLAHPSATPIDRPNVHAIITALRLLSSATHTGVPPDNTSFGGQCM* # ORIGINAL: g12896.t1 original gene structure, not modified by PASA NODE_658_length_19404_cov_41.8952 AUGUSTUS gene 383 2161 . - . ID=g12896;Name=g12896.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS mRNA 383 2161 . - . ID=g12896.t1;Parent=g12896;Name=g12896.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 383 2161 . - . ID=g12896.t1.exon1;Parent=g12896.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 383 2161 . - 0 ID=cds.g12896.t1;Parent=g12896.t1 #PROT g12896.t1 g12896 MSKVPPPRPAARPAEAPAPAPAPAARPPPPARPVSIINHAPVAATPPSSASSDSPAPRPPPRRKSQVDVEHTANLVESSSSSAHAAPQPAARPPPPKRPSSIAVSDGGDIKASTEDASKPVVATKPPPPARPARATTSADSVDGAAPQHAPPPAASTPPGRPPPAARPVSTIRPSTVPEGSEPAPTVPHPESRPPPPGRPATAPRPSEATSASTEAAHAAPSSKPPPPGRPAAAPKPAVAPAPETSHAAPPVVARPAARPPPPAARRSDEHDAAPAPAPEAHTEAAPAVDAAPAPTTRPPAPRPPPPAVKPSSFEGVHSNAFVPVAHVEPQVPPSRPPPVSADHGRPPPPAVGGRPPPPKVAAVVIPTRVPPPAAHKPSGPALPARPTEGHPLYFYEQPGPRAVCTKQYERGASDEIALRAGDRILIEGWTNERWRYGHVVGTSVKGSFPIANVTIIEDISKDIAPPSMPVVNIAPVYDDQAPGTEFAPIADYEDEPDPYANETPLPEGVPWARGIVDFDGQAAEELTFRAGDRILLEDYVNEDWLKGKHYKTGQHGMFPAVFVEIVQDVDPSAPSAETAPPAYEEPAPTHKE # PASA_UPDATE: g12898.t1, single gene model update, valid-1, status:[pasa:asmbl_8726,status:3], valid-1 NODE_658_length_19404_cov_41.8952 . gene 6532 9320 . - . ID=g12898;Name=g12898.t1 NODE_658_length_19404_cov_41.8952 . mRNA 6532 9320 . - . ID=g12898.t1;Parent=g12898;Name=g12898.t1 NODE_658_length_19404_cov_41.8952 . five_prime_UTR 9228 9320 . - . ID=g12898.t1.utr5p1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . exon 9091 9320 . - . ID=g12898.t1.exon1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . CDS 9091 9227 . - 0 ID=cds.g12898.t1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . exon 8716 8898 . - . ID=g12898.t1.exon2;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . CDS 8716 8898 . - 1 ID=cds.g12898.t1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . exon 7385 8588 . - . ID=g12898.t1.exon3;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . CDS 7385 8588 . - 1 ID=cds.g12898.t1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . exon 6532 7022 . - . ID=g12898.t1.exon4;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . CDS 6591 7022 . - 0 ID=cds.g12898.t1;Parent=g12898.t1 NODE_658_length_19404_cov_41.8952 . three_prime_UTR 6532 6590 . - . ID=g12898.t1.utr3p1;Parent=g12898.t1 #PROT g12898.t1 g12898 MQNLSSAASWADYAPSHRDAIDRFNTFFDDFAPFFSFISDVGNLRNDIEGIFAGRGVMLTTLTNEWVYLSRCIAQNLIWGANTPFLNNDTCQTHNFEADTTVSEIFDGKLNAAAYFGATRNNPNPNYGKTGVAIAKLEQFVTVLSNRLIELKPSTDIASIATIKSALLSICEDPNVLLAIPCDALRAMFDAIDRILLFLQETYVDPLFQEMKLALLSEYAGPYARDFLEHWDQFEETTSNDQPTFKVNTAFLTEDLRLDPDYSDAILAALAGVSVEDFRNAAQGATSVDGIAANTYSLAETRLGGAINGNDACMRSVWRGLVGGVDAAKNGLDLTQVDSNAEYNWLDCYTVAGEEDTVYRTRLARFVALLRVLHVLHSLVGPTINSLRQFANVETSNDTTRRTLNLGTLYYTVNPTQLTKLGLLDGAGIGDLLLRAGVQQSPFNVEKYSQICREFPHIICDAQQSLDDPNTTLGPLALPQRTVDAERSVTMWFDRPWIPVDGNKTYVRPLGCACTFTDFILGNSPAVATALYNNIFVYPPDCNTCFEYAPAGPLALAAVSGGSALRRSARVVDVHPDAPLSLAMAFASSPNNGAIAFTLVASVVCACMVLACLVVRYARRGGRKTAWCRADSAHVEQLGTIMIPGGSNVTV* # ORIGINAL: g12900.t1 original gene structure, not modified by PASA NODE_658_length_19404_cov_41.8952 AUGUSTUS gene 16849 18674 . + . ID=g12900;Name=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS mRNA 16849 18674 . + . ID=g12900.t1;Parent=g12900;Name=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 16849 16986 . + . ID=g12900.t1.exon1;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 16849 16986 . + 0 ID=cds.g12900.t1;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 17311 17923 . + . ID=g12900.t1.exon2;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 17311 17923 . + 0 ID=cds.g12900.t1;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 18197 18312 . + . ID=g12900.t1.exon3;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 18197 18312 . + 2 ID=cds.g12900.t1;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 18582 18674 . + . ID=g12900.t1.exon4;Parent=g12900.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 18582 18674 . + 0 ID=cds.g12900.t1;Parent=g12900.t1 #PROT g12900.t1 g12900 MAEDKPLIPIDEVLLHETPAQLVCPICNCVLDKPQLTGPCGHTFCQSCIEEWSARTNVCPICRRRVAGTFPVFALAEMVSELKVRCDYGLQPRRRAADKHSERTSPMQADPPSDVSGDSDGDGHAPKRMRKDVGEEEERMLVFEEKFGKQYEVDPLGCTEILPLGQRADHLANCSHRLVPCPHKCFIKIKAMDAAAHAATCYNRPVVCRFCRASFKSWTVANHEDDCLEAPAECPGQRRGCPASLRLHQLDWHIKCCPYVALESPFRTLESRLGSTLAEHDQLKHLILQIGTIEELVHLQRSLEVSAIQVFIPRFGQSE* # ORIGINAL: g12899.t1 original gene structure, not modified by PASA NODE_658_length_19404_cov_41.8952 AUGUSTUS gene 12110 15159 . + . ID=g12899;Name=g12899.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS mRNA 12110 15159 . + . ID=g12899.t1;Parent=g12899;Name=g12899.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 12110 13200 . + . ID=g12899.t1.exon1;Parent=g12899.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 12110 13200 . + 0 ID=cds.g12899.t1;Parent=g12899.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS exon 13347 15159 . + . ID=g12899.t1.exon2;Parent=g12899.t1 NODE_658_length_19404_cov_41.8952 AUGUSTUS CDS 13347 15159 . + 1 ID=cds.g12899.t1;Parent=g12899.t1 #PROT g12899.t1 g12899 MTGSRWQSLHRDVDNRDRRSFLPSFLMSTRLMIFCAVALITILVHGMLLLASAQARADGSMTLPGGAWGLSAGAVRGNEVHRRDTCAAYVYPRGQLDHPAAAAHAINAALTKEAKRILIATSGISGMINSGGIGTFCSALAQLLAERNVNVTMLYLGGTSMEMGTIDDWVDYHKKRKITLIPLPLLSDVPVESSRHRFIAYMTLQWLLKHDGEFDAIYFHDWRGYSYYAQVARNLGIAFATTPMIIGMHGPTAWSTLNSYVLFDQIEQLEIDFMERTAVQLADAVIAPSKYIVEWCRENAWQLPRSVFVHPNILLRDDEGIAATAELTKKVSGKKTKIRTVVFFGRLEIRKGLDTFCTAVTSLGESNPAIGSKMRVVFLGKEVQNAHGRASSRQFITRCMKGSDIPWVIASDLSSTQATAYLRSQHALAVMVSVSENSPYTVIECLEHGIPFISSNTGGIPELIIEEDREHVLVLPNPVHLAKAIERAFIEGALVARPVFSQTEVRNTWIPLLSSITAAAPRTPSFRDERCSLPLVTVCIIGRNRGQLLKQTLESVKMQDYLNIQTIVVDDFSDDPDTLEYLTWLENNIADFGVGSKVIRHDRVRGDGASRNTAVHNGDGEFVTFIDDDNCGKPYMVSSFVKAITNSDMDILTCFLDEFTDLTMPMFSTKLTSRWVPLGPSIAGGMFRNMFGDTSMIVRRQVFLAIGGFTEELGMGYTDWEFLAKANLKGYKLSVIPVGLVWYRKAAIPRITGSTSHTKNGLRTLRPYMSAFPQLKEIFIFARGLALKCDPFSTLSSADASSQRDYGPAQGVNGFFYGYFLMRDIGSTDLRFYEMTLYDTRGRWRLDDPTLPEHLNHHRTGAHPMVTGGRAYWPVKRWISKHEGPVHVSFLFTRLTYNCQRGDGIIGRVYLDGREIWFQRLDAQSCSSTETVIKPSVRMGSILDFAIDPVKDDYFDGTELAVSMMYL* # ORIGINAL: g8962.t1 original gene structure, not modified by PASA NODE_8499_length_368_cov_91.802 AUGUSTUS gene 1 368 . - . ID=g8962;Name=g8962.t1 NODE_8499_length_368_cov_91.802 AUGUSTUS mRNA 1 368 . - . ID=g8962.t1;Parent=g8962;Name=g8962.t1 NODE_8499_length_368_cov_91.802 AUGUSTUS exon 1 368 . - . ID=g8962.t1.exon1;Parent=g8962.t1 NODE_8499_length_368_cov_91.802 AUGUSTUS CDS 1 368 . - 1 ID=cds.g8962.t1;Parent=g8962.t1 #PROT g8962.t1 g8962 PFLTSLAGLVSLRTISCPFGSPGSRGALYVTDNQRLPNIDIFAPIKELGAVSIQRNPSLANLDGLRGLTTVHNDLRITENALLSSISGLAGLTVADAEYELRANPSLPAADIFSRLLNVGRL # ORIGINAL: g3085.t1 original gene structure, not modified by PASA NODE_6877_length_498_cov_85.844_potentialcontaminant AUGUSTUS gene 94 498 . + . ID=g3085;Name=g3085.t1 NODE_6877_length_498_cov_85.844_potentialcontaminant AUGUSTUS mRNA 94 498 . + . ID=g3085.t1;Parent=g3085;Name=g3085.t1 NODE_6877_length_498_cov_85.844_potentialcontaminant AUGUSTUS exon 94 498 . + . ID=g3085.t1.exon1;Parent=g3085.t1 NODE_6877_length_498_cov_85.844_potentialcontaminant AUGUSTUS CDS 94 498 . + 0 ID=cds.g3085.t1;Parent=g3085.t1 #PROT g3085.t1 g3085 MASFAISIGIQVAIGGIKQARTKSGNGGRAQELGKRLENVVELLKVLQTKYGNNALPALLTPDIEAMSATIQETVDYIRQADEESGVAGFFHAGAHEENFYRLDKAITACVSNLSVHCLELMMALPATSTTAPIK # PASA_UPDATE: g4608.t1, single gene model update, valid-1, status:[pasa:asmbl_3011,status:12], valid-1 NODE_1918_length_8540_cov_40.3253 . gene 962 5770 . + . ID=g4608;Name=g4608.t1 NODE_1918_length_8540_cov_40.3253 . mRNA 962 5770 . + . ID=g4608.t1;Parent=g4608;Name=g4608.t1 NODE_1918_length_8540_cov_40.3253 . exon 962 1042 . + . ID=g4608.t1.exon1;Parent=g4608.t1 NODE_1918_length_8540_cov_40.3253 . CDS 962 1042 . + 0 ID=cds.g4608.t1;Parent=g4608.t1 NODE_1918_length_8540_cov_40.3253 . exon 1155 5770 . + . ID=g4608.t1.exon2;Parent=g4608.t1 NODE_1918_length_8540_cov_40.3253 . CDS 1155 5447 . + 0 ID=cds.g4608.t1;Parent=g4608.t1 NODE_1918_length_8540_cov_40.3253 . three_prime_UTR 5448 5770 . + . ID=g4608.t1.utr3p1;Parent=g4608.t1 #PROT g4608.t1 g4608 MARLIVCTTLTVAISLALFVSVVSGTELVERDAIDQDACNPNPCLHRGVCRTDVALDIFVCDCPDGFLGQTCEMTPEFNPENLRPCIGEDGIFGGCATPVPTPVPTSLPPTHSSTPLPVDPCDPNPCANGGTCANADGDAQCTCKTGFTGSYCDVDQCDPNPCNNGGKCHHADNADGLTCECTNGFTGSRCDIPPNPCTPNPCKNGAECSNVDGDATCQCAAGYGGTRCQIDKCDPNPCNNGGKCHHADNADGLTCECTNGFTGSRCDIPPNPCTPNPCKNGAECSNVDGDATCQCAAGYGGTRCQIDKCDPNPCNNGGKCHHADNADGLTCECTNGFTGSRCDVAPDPCAPNPCENNAECSVDSGFAKCKCKPGFSGVRCQNIYNICVEAQPCFNNATCTVTEGLDYTCTCLPGFEGRTCKNVINPCKGPTCGKNGVCVATGPNNGDFRCDCALGWTGATCDQETDPCHPSPCQNQGECSIVNGFPKCKCAPGWTGSRCTVVYDICAQAKPCNNNATCVWLGGLDYRCDCQPGYEGRTCKNAINPCSRINCGVHGECEATGPNYGNVKCNCEDGWTGVFCTVPSNPCLPTPCQNGGECSVVNGFPKCKCAPGWTGSRCNVEYDICLQARPCLNNGVCVRLGGLDYRCDCQPGYEGRTCKSKIDPCSRGGCGKNGVCVATGINYGDFRCDCKKGYTGQFCNVDEDECAAGVCKNFARCVNSRGGYTCFCRPGTSGTNCDVVANACLKSPCAAGSLCEPSIFSDTKCVCAAGKAGSTCDQSASPSYTLAALSSIQVRAVARDSLSSVTLAFRTLNPAGLLFAHGASADDAFAVILNGGDVSVIVSGGEITLRAQNGGSFADGEWHTLRITDKSATERTVSVDGFSKTVAYGGWANANDVHIGFVALGSNDIAGFSGCIKDVIIGGKALSALSETVFSHVRPGCADSAAFSFAGKSYVNFDASLEGPKSSLSITFRTLSQSRMLLVHQGLANMRLSGYVDAGKLSFFLNLGRGDGSLTLDYFVADGDWHTVVVTRDRHIATVNIDGAAATGTFRSLGQSRQFAPFGQTMVGGNRKGSYDLVTGAPGFQGCISEVTINGNAMQINSAGAVKVTACASAEIFSLDGNGYVQGTPYSPADAGSVQLRFRASSPTGILAYAAENSAFYILELFDGRVRAAFDTGNGLAEGSVGVNLADGFWHTVTFTRTKNDAVVSVDGDVAELHAPGIAHLLNVNTALYVGGHPGLVNGPIVGSHSNVGFVGCVSRVVAGTGGVISGDFPTLRVNTLLGCPALSNDLTLRPDATATFHTLPTPAVDGTSLRFAIRATLSTNTLANQDIAVLTSESGDTIAIKFTSYYVSATVNIGGVVVTVGVPNRPFVVDGQWHTVNASVRGGMLQLAVDDLFTTSAPLEGFTAGKLSFGSATLDACIRDIVVNGKTASMQAASFDGEVSTGCSALTGVYF* # ORIGINAL: g4609.t1 original gene structure, not modified by PASA NODE_1918_length_8540_cov_40.3253 AUGUSTUS gene 6470 7865 . + . ID=g4609;Name=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS mRNA 6470 7865 . + . ID=g4609.t1;Parent=g4609;Name=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS exon 6470 6507 . + . ID=g4609.t1.exon1;Parent=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS CDS 6470 6507 . + 0 ID=cds.g4609.t1;Parent=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS exon 6681 7203 . + . ID=g4609.t1.exon2;Parent=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS CDS 6681 7203 . + 1 ID=cds.g4609.t1;Parent=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS exon 7428 7865 . + . ID=g4609.t1.exon3;Parent=g4609.t1 NODE_1918_length_8540_cov_40.3253 AUGUSTUS CDS 7428 7865 . + 0 ID=cds.g4609.t1;Parent=g4609.t1 #PROT g4609.t1 g4609 MQRPSERDQLLDKNNTYRNPYTFLDDDADEYGPDTHTGVDAQRAHYYDHSADNNGLSLTSTHWAEPFIEANRDEYIDLHWLHLQNQFARRFIASVALLPKFALDGAGWQAAFEIASRSGHTVSDWQLHAYTGVGSGVGVFVAHFVTSVMASACNGKERGPLRAQWGRIIFESFHLGVAAMLAGMLWQPAVNHFIDSGFYSTGLMTGLICGTAFLVAFTFGRLVIRGLFECGHRFLAQNDRNHLWEDVKLSLWTVFWSSFAFVLTAFDTPFQCKPSAHAALNIAKAAATTTIGFCLAHMVVRVPLEANVGAARHAGLDLLRSRVASFRGGDAF* # ORIGINAL: g3513.t1 original gene structure, not modified by PASA NODE_846_length_16872_cov_40.3734 AUGUSTUS gene 1959 4936 . - . ID=g3513;Name=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS mRNA 1959 4936 . - . ID=g3513.t1;Parent=g3513;Name=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 4760 4936 . - . ID=g3513.t1.exon1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 4760 4936 . - 0 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 4533 4616 . - . ID=g3513.t1.exon2;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 4533 4616 . - 0 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 4297 4382 . - . ID=g3513.t1.exon3;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 4297 4382 . - 0 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 3053 3688 . - . ID=g3513.t1.exon4;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 3053 3688 . - 1 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 2694 2843 . - . ID=g3513.t1.exon5;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 2694 2843 . - 1 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 2193 2270 . - . ID=g3513.t1.exon6;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 2193 2270 . - 1 ID=cds.g3513.t1;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 1959 2040 . - . ID=g3513.t1.exon7;Parent=g3513.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 1959 2040 . - 1 ID=cds.g3513.t1;Parent=g3513.t1 #PROT g3513.t1 g3513 MSTMEAGDGIAADPLDREARKLYFGNLSSRVRQTDLAAFIGSKFGHVEHIEFKTGFAFVAFEDSLYLDQAVEELHGQELGGQPVKVERARGKLPQYQYPIQPGSTRCFRCHKEGHCNDVHDERGFESAHHSAPHDDRDRRHAAHYGGHEDKRRSYEPDTARRVAPSHHHDDRDRERDREPVREREPIRERERPDVRERDYRETDPYAAPRYDSRDTRGTPRAAEYAPTPRATYSDSRAASYDKPAYRYESTPVSASRPAERDSRGGYADSRGYADSSRAPVYADSGRSYEQRPATADYGRSSASSYDTRPDYRGYESTKAATQYGSASKFESRTSSHGYSNGGSHAQTAPSSASYGRQYEHREYDSRTSGAHEYARARSPAPVYVSSHGGSSHGYARAPSPQRRSYADSARVYERSPPRYEQRPASPRRR* # ORIGINAL: g3516.t1 original gene structure, not modified by PASA NODE_846_length_16872_cov_40.3734 AUGUSTUS gene 10954 11822 . + . ID=g3516;Name=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS mRNA 10954 11822 . + . ID=g3516.t1;Parent=g3516;Name=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 10954 11089 . + . ID=g3516.t1.exon1;Parent=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 10954 11089 . + 0 ID=cds.g3516.t1;Parent=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 11320 11465 . + . ID=g3516.t1.exon2;Parent=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 11320 11465 . + 2 ID=cds.g3516.t1;Parent=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 11622 11822 . + . ID=g3516.t1.exon3;Parent=g3516.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 11622 11822 . + 0 ID=cds.g3516.t1;Parent=g3516.t1 #PROT g3516.t1 g3516 MDVIITAARYGDDDEVRQLVSADSYKVRDVNGNTALHMAAANGHTEVVRLLLEHWPPGEVDARNTAGNTPLHWAALNGHAEVARALVEAKADPEAKNGAGRTPFYEAMNRSDSAVSEVLIAAMEAAEGAGEGEGEGEGDEGTTNPDGDDADSPAEEAGEK* # PASA_UPDATE: g3515.t1, single gene model update, valid-1, status:[pasa:asmbl_9659,status:12], valid-1 NODE_846_length_16872_cov_40.3734 . gene 7136 10478 . - . ID=g3515;Name=g3515.t1 NODE_846_length_16872_cov_40.3734 . mRNA 7136 10478 . - . ID=g3515.t1;Parent=g3515;Name=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 10226 10478 . - . ID=g3515.t1.exon1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 10226 10478 . - 0 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 9576 10025 . - . ID=g3515.t1.exon2;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 9576 10025 . - 2 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 8726 8859 . - . ID=g3515.t1.exon3;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 8726 8859 . - 2 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 8471 8581 . - . ID=g3515.t1.exon4;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 8471 8581 . - 0 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 8163 8270 . - . ID=g3515.t1.exon5;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 8163 8270 . - 0 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 7833 7951 . - . ID=g3515.t1.exon6;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 7833 7951 . - 0 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . exon 7136 7327 . - . ID=g3515.t1.exon7;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . CDS 7201 7327 . - 1 ID=cds.g3515.t1;Parent=g3515.t1 NODE_846_length_16872_cov_40.3734 . three_prime_UTR 7136 7200 . - . ID=g3515.t1.utr3p1;Parent=g3515.t1 #PROT g3515.t1 g3515 MAARAAVARLLASGARRALSSQPTRTHAANAVAPALLRRSFASSAVLANARHAARPAHLPLTRAVPAAAVAVPLLARRANHVCSFDEHKSSFRQKFIESLTESGRLPKEKAEAFFESAFTIAQNPNENRFASELSALETDLVALLGQTAYLAAREQHGEVATLGLRMAAGYFRVAADRGHRAATFSYAQMLSQGVGAELNIKGAVSLFEANIANHNDPLSMFSLGGILYEGFPDDGVEGDAPRAVALFKKAAEAGVPQAFALIGRAYLDGKGVERDQAVAKEYIDKGIEKKDPFALMTGAQLHSRGDAGFPKSDEKAFEYHVLSAEAGLSEAAHNVGVHYLAGRGTQLDHRKAAAYFEQAAVAGFVPSQMNLAAMYLRGVGVPRDLDLAKQWYEIAAMVDNAAKSIIANWDDAIKRLDEEKTNGTAASGTQQQ* # PASA_UPDATE: g3514.t1, single gene model update, valid-1, status:[pasa:asmbl_9658,status:3], valid-1 NODE_846_length_16872_cov_40.3734 . gene 5382 7088 . + . ID=g3514;Name=g3514.t1 NODE_846_length_16872_cov_40.3734 . mRNA 5382 7088 . + . ID=g3514.t1;Parent=g3514;Name=g3514.t1 NODE_846_length_16872_cov_40.3734 . five_prime_UTR 5382 5494 . + . ID=g3514.t1.utr5p1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . exon 5382 5497 . + . ID=g3514.t1.exon1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . CDS 5495 5497 . + 0 ID=cds.g3514.t1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . exon 5753 5849 . + . ID=g3514.t1.exon2;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . CDS 5753 5849 . + 0 ID=cds.g3514.t1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . exon 6352 6551 . + . ID=g3514.t1.exon3;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . CDS 6352 6551 . + 2 ID=cds.g3514.t1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . exon 6905 7088 . + . ID=g3514.t1.exon4;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . CDS 6905 6961 . + 0 ID=cds.g3514.t1;Parent=g3514.t1 NODE_846_length_16872_cov_40.3734 . three_prime_UTR 6962 7088 . + . ID=g3514.t1.utr3p1;Parent=g3514.t1 #PROT g3514.t1 g3514 MASLKEKVGYSEEPRVHRIRITLSSRNVKNLEKVCADLIRGAKDKQLKVKGPVRIPTKTLRLTTRKTPCGEGSKTWDRYEMRVHKRLIDLHSPSEVVKQITSINIEPGVEVEVTIADI* # PASA_UPDATE: g3512.t1, single gene model update, valid-1, status:[pasa:asmbl_9657,status:3], valid-1 NODE_846_length_16872_cov_40.3734 . gene 145 1148 . + . ID=g3512;Name=g3512.t1 NODE_846_length_16872_cov_40.3734 . mRNA 145 1148 . + . ID=g3512.t1;Parent=g3512;Name=g3512.t1 NODE_846_length_16872_cov_40.3734 . five_prime_UTR 145 214 . + . ID=g3512.t1.utr5p1;Parent=g3512.t1 NODE_846_length_16872_cov_40.3734 . exon 145 301 . + . ID=g3512.t1.exon1;Parent=g3512.t1 NODE_846_length_16872_cov_40.3734 . CDS 215 301 . + 0 ID=cds.g3512.t1;Parent=g3512.t1 NODE_846_length_16872_cov_40.3734 . exon 594 1148 . + . ID=g3512.t1.exon2;Parent=g3512.t1 NODE_846_length_16872_cov_40.3734 . CDS 594 1055 . + 0 ID=cds.g3512.t1;Parent=g3512.t1 NODE_846_length_16872_cov_40.3734 . three_prime_UTR 1056 1148 . + . ID=g3512.t1.utr3p1;Parent=g3512.t1 #PROT g3512.t1 g3512 MFRCCVAVAGQTFTEAAVRRVFAGQPQPRDKVFASRGHFSTCGARSFDDSSAFNASNSPAESILTPLPSLSSATVTATGTAPLGVPSEGNVPPSSNASASPSQTRGTSTATKEYPQPPQNCCMSGCRNCVWDDYFEQMDAMRPKRDEAVHDDATRPPDHPAEEEVDPTVLMLRRLETKLRHQ* # ORIGINAL: g3517.t1 original gene structure, not modified by PASA NODE_846_length_16872_cov_40.3734 AUGUSTUS gene 12746 16666 . - . ID=g3517;Name=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS mRNA 12746 16666 . - . ID=g3517.t1;Parent=g3517;Name=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 16501 16666 . - . ID=g3517.t1.exon1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 16501 16666 . - 1 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 15925 16187 . - . ID=g3517.t1.exon2;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 15925 16187 . - 0 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 15640 15780 . - . ID=g3517.t1.exon3;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 15640 15780 . - 1 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 15201 15429 . - . ID=g3517.t1.exon4;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 15201 15429 . - 1 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 14791 14956 . - . ID=g3517.t1.exon5;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 14791 14956 . - 0 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 14320 14477 . - . ID=g3517.t1.exon6;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 14320 14477 . - 2 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 13931 14094 . - . ID=g3517.t1.exon7;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 13931 14094 . - 0 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 13446 13545 . - . ID=g3517.t1.exon8;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 13446 13545 . - 1 ID=cds.g3517.t1;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS exon 12746 13144 . - . ID=g3517.t1.exon9;Parent=g3517.t1 NODE_846_length_16872_cov_40.3734 AUGUSTUS CDS 12746 13144 . - 0 ID=cds.g3517.t1;Parent=g3517.t1 #PROT g3517.t1 g3517 NFRTRRFGLWLRRQFELVQSLPRYLVPLYFDVVVTASIVLLKDHALGLMGSFVGEGSELVRALALGSVQLYGIVASSSFPASIEPAETDVPPDAADAGPDAGHVPRRRSLLTLPVADQHHLPTTHKPPSLAAGLPHFSVGYMRCWGRDTFIALRGLFLVTQRYDDARSIIVTCAACVRHGLVPNLLDGGKNPRFNARDAAWWFLQAVQDYVHLAPDGISLLSVRVRRLFPYDDQREHSEWSGRGYTPTVISTVGEIVYEIVTKHAQGIDFREWNAGPTIDRVMTSHGFQVHTGIDQYTGFPFGGNQFNCGTWMDKMGESGQAGTCGVPATPRDGSAIELVGLCKSTVRWLASIGGSAEFPHTSVPLRLSDGGTRSLTFAEWDALIASNFESKFFIPEDPLMDEFHAVDKSVVFRRGIYRDTVGASEKYRDYQLRPNQYVAMAVAPELFDTSHAMAALALGDKLLVGPLGIKTLDPNDWNYCGDYTNSIDSTDAKTSKGFNYHNGPEWLWVLGYFLRAKVAVAARAEGRLRRAVAEVEYALAGHKRHVFDRNLWEGLPELTNAHGAPCHDGCPVQAWSASCILDVLFDIKRHGGQ* # ORIGINAL: g4242.t1 original gene structure, not modified by PASA NODE_3887_length_2563_cov_40.3424 AUGUSTUS gene 109 2413 . - . ID=g4242;Name=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS mRNA 109 2413 . - . ID=g4242.t1;Parent=g4242;Name=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 2404 2413 . - . ID=g4242.t1.exon1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 2404 2413 . - 0 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 2194 2298 . - . ID=g4242.t1.exon2;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 2194 2298 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 1944 2068 . - . ID=g4242.t1.exon3;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 1944 2068 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 1606 1777 . - . ID=g4242.t1.exon4;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 1606 1777 . - 0 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 1343 1435 . - . ID=g4242.t1.exon5;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 1343 1435 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 1002 1142 . - . ID=g4242.t1.exon6;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 1002 1142 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 750 890 . - . ID=g4242.t1.exon7;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 750 890 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 431 604 . - . ID=g4242.t1.exon8;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 431 604 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS exon 109 274 . - . ID=g4242.t1.exon9;Parent=g4242.t1 NODE_3887_length_2563_cov_40.3424 AUGUSTUS CDS 109 274 . - 2 ID=cds.g4242.t1;Parent=g4242.t1 #PROT g4242.t1 g4242 MEVANQCTGNNQPPACTPTAGCQGQVLPYVPVVAACGADAATVTAKLGTAGCQAILGPQLFNTANPYFKLFVACGLDGAKFVSAPCVALANANKVCREVNPNHDFANGICVSEGTCDCRTKPLKPADKGYGGVDCSIPICDPPCVKGRCTAPDTCSCFDGWNGIACDRANCDPPYASGTCFAQGGVCKAKANEVYGPGAHQCSCLGGYYGPTCQSTCDCSPSGTLESTAVAGNGTLATQPFTCSTEGTCTCKSDYQGAKCSSKKTPMYVILVPAVVCSLFGLIVFIFGARWYLRRQREMNELANLDWKIDYNLIQLGAKNAFGSRRAMSSSKGSVRSGRQSMGSGDHKKSRQSAMSGRQSSNSMGGAQIFTEVGS # PASA_UPDATE: g13844.t1, single gene model update, valid-1, status:[pasa:asmbl_593,status:3], valid-1 NODE_1156_length_13474_cov_39.1753 . gene 3113 7295 . + . ID=g13844;Name=g13844.t1 NODE_1156_length_13474_cov_39.1753 . mRNA 3113 7295 . + . ID=g13844.t1;Parent=g13844;Name=g13844.t1 NODE_1156_length_13474_cov_39.1753 . five_prime_UTR 3113 3773 . + . ID=g13844.t1.utr5p1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . five_prime_UTR 3899 3946 . + . ID=g13844.t1.utr5p2;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . five_prime_UTR 4293 4473 . + . ID=g13844.t1.utr5p3;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 3113 3773 . + . ID=g13844.t1.exon1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 3899 3946 . + . ID=g13844.t1.exon2;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 4293 4750 . + . ID=g13844.t1.exon3;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 4474 4750 . + 0 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 5067 5135 . + . ID=g13844.t1.exon4;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 5067 5135 . + 2 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 5442 5633 . + . ID=g13844.t1.exon5;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 5442 5633 . + 2 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 5952 6154 . + . ID=g13844.t1.exon6;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 5952 6154 . + 2 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 6459 6622 . + . ID=g13844.t1.exon7;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 6459 6622 . + 0 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . exon 6809 7295 . + . ID=g13844.t1.exon8;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . CDS 6809 7082 . + 1 ID=cds.g13844.t1;Parent=g13844.t1 NODE_1156_length_13474_cov_39.1753 . three_prime_UTR 7083 7295 . + . ID=g13844.t1.utr3p1;Parent=g13844.t1 #PROT g13844.t1 g13844 MYVKCLHCVVLCWHRLTNTHIILTHIRKLINSQTHTLTLTYFHTHTHTHTGDNSVVPDDFTAAEMKKGLWWRHLVAGGLAGAVSRTATAPLDRLKTILQVQKKAAKGAPRQSVWGEFRRLIVEGGFRSMWRGNGVNVVKIAPETAIKFLAYESAKTLFGTPGSTNQPSTMTRLCAGSLAGVISQTIVYPLDVLKTRLATVPTGTYKSFPDAVVQLYTAGGIRSFYAGLAPCLTGVIPYAGIDLAIYEGLKGYYVNVYPMREPGILALLGFATVSSTCGQLASYPLALIRTRLQAQNPLDPNRYTGALDVFRRTIREEGFTGLYRGLGPNFLKVIPSVGISYVVYEQAKKVLTEEPRRKELAKRARKAQMNAKAVFGRASISTTNPAPAGAGS* # ORIGINAL: g13843.t1 original gene structure, not modified by PASA NODE_1156_length_13474_cov_39.1753 AUGUSTUS gene 178 2575 . - . ID=g13843;Name=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS mRNA 178 2575 . - . ID=g13843.t1;Parent=g13843;Name=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 2522 2575 . - . ID=g13843.t1.exon1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 2522 2575 . - 0 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 2182 2346 . - . ID=g13843.t1.exon2;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 2182 2346 . - 0 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 1815 1885 . - . ID=g13843.t1.exon3;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 1815 1885 . - 0 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 1417 1579 . - . ID=g13843.t1.exon4;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 1417 1579 . - 1 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 760 965 . - . ID=g13843.t1.exon5;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 760 965 . - 0 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 477 557 . - . ID=g13843.t1.exon6;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 477 557 . - 1 ID=cds.g13843.t1;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 178 377 . - . ID=g13843.t1.exon7;Parent=g13843.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 178 377 . - 1 ID=cds.g13843.t1;Parent=g13843.t1 #PROT g13843.t1 g13843 MVRAVSEIASTLCALYDKGVRDINIKSIFSKTAGKYSMTHQPKLVDVIAAIPETHKRTVLPLLKAKPVRTASGIAVVAVMCKPHRCPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQTRNRVDQLKGLGHSVDKVEFIIMGGTFMSQPPEYRDQFVRSLHDALSGHVSSSVDEAVLYSERSKTKCIGITIETRPDYCLKPHLSSMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLAKDSGYKVVAHMMPDLPNVGLERDVDGFVEFFENPAFRADGLKIYPTLVIRGT # ORIGINAL: g13845.t1 original gene structure, not modified by PASA NODE_1156_length_13474_cov_39.1753 AUGUSTUS gene 8410 12685 . + . ID=g13845;Name=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS mRNA 8410 12685 . + . ID=g13845.t1;Parent=g13845;Name=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 8410 8955 . + . ID=g13845.t1.exon1;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 8410 8955 . + 0 ID=cds.g13845.t1;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 9069 9203 . + . ID=g13845.t1.exon2;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 9069 9203 . + 0 ID=cds.g13845.t1;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 9523 9885 . + . ID=g13845.t1.exon3;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 9523 9885 . + 0 ID=cds.g13845.t1;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 10075 12326 . + . ID=g13845.t1.exon4;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 10075 12326 . + 0 ID=cds.g13845.t1;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS exon 12562 12685 . + . ID=g13845.t1.exon5;Parent=g13845.t1 NODE_1156_length_13474_cov_39.1753 AUGUSTUS CDS 12562 12685 . + 1 ID=cds.g13845.t1;Parent=g13845.t1 #PROT g13845.t1 g13845 MERERGPQRTMPRWHRPSIFKEAVTLLLVVALLHSSSADQNLAPGVYNLAPQTVGNGQVVRFRRTSAGVVSLRCTTCKGSGTSLFTVTGNGVLDLQDMSLEGEVASSVAQLYGAISATDSATVKLTNVEITNFGRGIRLSRSASVDADGLTCFGNGVSAALAGTLGLNGDSSPFDGACMLMQESATATFRTSKFVANRAASMLGSCGGAISAHQSSALTVTDSEFTANTAPSGGAICGRGPVLTNVTRTAFRGNYGNGNSCDPSDKGCADVYGGGGAFALSEHAMGIINSCTFVNNSAPVCGTVWLRGPGGSLDVTSSTFDNSSAVAIIAPDTLSSRKVYGSGGIACVGSVDRATLLDEQITKDPAPNPVYGGGGGLPPPGPGNRRRASPGPQTSLTMTNCTLFNSCAKRGSGIAVTEDSTVVLRNCILDRLGDSGLQLSSASVFVHLFVDGAETRVASRLDVDGCEIRSMASDTGNLFRCSGSDVRVSNSVLVGPFSYGDEGKKMSASGSFAGVFGFYSNAQSTLTLANVRLLRPPPLILLSNLVEYAIAVHEGDRVAISVDGAILDNAPLGLLAMNEGAVFADVSNVVMINRTVAGVMGESAGLLYLTKGRALLRNITLSLTSGEMVVVTNGTLHVFNVTANATRAVALDRAVIFMHPGATSASPSVTIDGATVLDALGGFVRVDAGSTALSHVRTDGLASYAVLSASDAISVTLTSSMLLRSTFRDGAAGAADFGVVIVRGGSVIISRSVFVTSTTRFVSVTAGAVQISNSTFAESSRSVLFVRGGNTTASGCTITGAARNLPNTITEPCVRMSNNALFTLANSSVQNCWMPRAEGGFVKADGSSVLVLKSVSVSNCTAQVGAVVHASESANVSIAACTFGSSVATFYGAVVLSGTGVVGLIDGTLFVQNSARSYGSALVVENGALITVVRSEFLRCFVTASSGAAVVAAPLSSLTMIDSVIRGCRSARAGAALSVQFNATVELTRVHVTGNSASRGAAMLVLEDALVTANACEFSSNEGTSGDGGGVVVDAQEARLLFTRCVFAGNTCGVDGGAAYFGGSADVRIADCLFGNNTARSGGAIFVTDSANVLVSATTAEKYGGSIQMEGVSELRAQNVSFIDSAAGLDGGIAFLSGV* # ORIGINAL: g1815.t1 original gene structure, not modified by PASA NODE_3409_length_3532_cov_39.9795 AUGUSTUS gene 1725 3289 . - . ID=g1815;Name=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS mRNA 1725 3289 . - . ID=g1815.t1;Parent=g1815;Name=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS exon 3124 3289 . - . ID=g1815.t1.exon1;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS CDS 3124 3289 . - 0 ID=cds.g1815.t1;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS exon 2842 2911 . - . ID=g1815.t1.exon2;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS CDS 2842 2911 . - 2 ID=cds.g1815.t1;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS exon 2506 2647 . - . ID=g1815.t1.exon3;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS CDS 2506 2647 . - 1 ID=cds.g1815.t1;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS exon 2163 2303 . - . ID=g1815.t1.exon4;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS CDS 2163 2303 . - 0 ID=cds.g1815.t1;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS exon 1725 1904 . - . ID=g1815.t1.exon5;Parent=g1815.t1 NODE_3409_length_3532_cov_39.9795 AUGUSTUS CDS 1725 1904 . - 0 ID=cds.g1815.t1;Parent=g1815.t1 #PROT g1815.t1 g1815 MYKTHTCRFSDLGSRLPSVFVDSFDNANATDPTAAVRDNSTTTIGSAWAVWQLNDELLRDMYPITIMPLPAIVDTSAASFGPSTAKLNLRVDSEWRARGMFAFGSDGIASFGFVFRGYTSTSVSQPLLFFLGCVPGSTPYSCRPSMKCSDPSFLSLTASPDRELEPNVWYYLEAWLTKSADSQNLKFVFSLDLTTMDGLDQSIVTKWTATFPLPYNPEVFTDRVRWFLFVQT* # ORIGINAL: g8853.t1 original gene structure, not modified by PASA NODE_2070_length_7854_cov_35.2813 AUGUSTUS gene 2229 5646 . + . ID=g8853;Name=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS mRNA 2229 5646 . + . ID=g8853.t1;Parent=g8853;Name=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 2229 3899 . + . ID=g8853.t1.exon1;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 2229 3899 . + 0 ID=cds.g8853.t1;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 4176 4319 . + . ID=g8853.t1.exon2;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 4176 4319 . + 0 ID=cds.g8853.t1;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 4791 4853 . + . ID=g8853.t1.exon3;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 4791 4853 . + 0 ID=cds.g8853.t1;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 5051 5155 . + . ID=g8853.t1.exon4;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 5051 5155 . + 0 ID=cds.g8853.t1;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 5413 5646 . + . ID=g8853.t1.exon5;Parent=g8853.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 5413 5646 . + 0 ID=cds.g8853.t1;Parent=g8853.t1 #PROT g8853.t1 g8853 MATTGKARHDAQRQQRHAAAFSFLTGISLQGGTTAPSTRAFVPGSAGGTIGYSSTSQPPSAGLTPLPQQQQQQQLQQQQQPIPQQQQQPQTPQQQQQQQQQQLYSVQQSDQSNPPSAGYLSATSPTGTPQPSDLSPGDGRHFVYPARVAAIAGEHGMHLRRHSEPGNAPGGSLVHGPANGSLRNVSDPAALGTLGADDSGSEGDALSPTSRGHATRADEQSWRSSIDGRALPSHVTGYGALASRDDRLSSPVVRHGSLDASSLRNALYNAERSSSPISHILTRSKENLLLERHNSLTLAEDIGDMHAAPATAQRGVVRLASMGKLSAAVSASASSASASSAQAVTALLGSRLYFAGWPSSGAAPGEGAPLSAPSSAGLSLGAPSSATALGLAPSTPGLPAAAGTFGSQVSSWGLAQSPFPPFLGESVALGRTNSLVASAPVWVCSFLPYRSASKRTAKGDTPGDTSLSAGPDATAATASTQPLLALSQTTGSVAFISSGKSKVKAVSYRQLLDGSSANEVVDDDDEPRPQAYDPHMLDDPEMRSGKHRTVMKLPSLTVSIIQYVRPSDLKRGLNEQFRERHPTIPLTFSKMRSLKLALLEIGVTQSGLELSTVAKSYVYFEKLILKGVVTKDNRKEVAAACLLLAAKFNDQLCYQLKSLFESVEHVFGVPKKSVIAYEFPVYVALEFTLHIDPAVIFPHLDRLFHLLPDYAEPLFTVQVQQKRDTLAATESSDDGVED* # ORIGINAL: g8854.t1 original gene structure, not modified by PASA NODE_2070_length_7854_cov_35.2813 AUGUSTUS gene 7120 7854 . - . ID=g8854;Name=g8854.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS mRNA 7120 7854 . - . ID=g8854.t1;Parent=g8854;Name=g8854.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 7646 7854 . - . ID=g8854.t1.exon1;Parent=g8854.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 7646 7854 . - 1 ID=cds.g8854.t1;Parent=g8854.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS exon 7120 7412 . - . ID=g8854.t1.exon2;Parent=g8854.t1 NODE_2070_length_7854_cov_35.2813 AUGUSTUS CDS 7120 7412 . - 2 ID=cds.g8854.t1;Parent=g8854.t1 #PROT g8854.t1 g8854 PPPAGGPAPAKKWGASGSTASPAASGGGGPPPPPPAAAAAPGPKKWGPVVPGKAAAPIVVEAPPPPPPEPTSTIDENLPAWKKAVLIKKEQEKAAAAAAATDKSKEEEDKKYAGLPDWKKNLLKKKDQEKADAARPELEKAQKEKERQEYLASLPEWKRNLILKNG* # PASA_UPDATE: g8852.t1, single gene model update, valid-1, status:[pasa:asmbl_3416,status:12], valid-1 NODE_2070_length_7854_cov_35.2813 . gene 257 688 . - . ID=g8852;Name=g8852.t1 NODE_2070_length_7854_cov_35.2813 . mRNA 257 688 . - . ID=g8852.t1;Parent=g8852;Name=g8852.t1 NODE_2070_length_7854_cov_35.2813 . five_prime_UTR 608 688 . - . ID=g8852.t1.utr5p1;Parent=g8852.t1 NODE_2070_length_7854_cov_35.2813 . exon 257 688 . - . ID=g8852.t1.exon1;Parent=g8852.t1 NODE_2070_length_7854_cov_35.2813 . CDS 257 607 . - 0 ID=cds.g8852.t1;Parent=g8852.t1;3_prime_partial=true #PROT g8852.t1 g8852 MASNDASYRPLLQDDAFDTLPTTVQSKGDDGKPLASSASFKRDSVMLNAAYNQQIMDELHYVAKVINPRARMHNILLISNTFLLLSMVLVLLILVFGMNKSMNKMNDNMNSMQETMQ # PASA_UPDATE: g4636.t1, single gene model update, valid-1, status:[pasa:asmbl_1871,status:12], valid-1 NODE_1528_length_10710_cov_49.7551 . gene 9218 10462 . - . ID=g4636;Name=g4636.t1 NODE_1528_length_10710_cov_49.7551 . mRNA 9218 10462 . - . ID=g4636.t1;Parent=g4636;Name=g4636.t1 NODE_1528_length_10710_cov_49.7551 . five_prime_UTR 10462 10462 . - . ID=g4636.t1.utr5p1;Parent=g4636.t1 NODE_1528_length_10710_cov_49.7551 . exon 10183 10462 . - . ID=g4636.t1.exon1;Parent=g4636.t1 NODE_1528_length_10710_cov_49.7551 . CDS 10183 10461 . - 0 ID=cds.g4636.t1;Parent=g4636.t1;5_prime_partial=true NODE_1528_length_10710_cov_49.7551 . exon 9218 9682 . - . ID=g4636.t1.exon2;Parent=g4636.t1 NODE_1528_length_10710_cov_49.7551 . CDS 9455 9682 . - 0 ID=cds.g4636.t1;Parent=g4636.t1 NODE_1528_length_10710_cov_49.7551 . three_prime_UTR 9218 9454 . - . ID=g4636.t1.utr3p1;Parent=g4636.t1 #PROT g4636.t1 g4636 STSYRKPGVAPPKKKSGKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGTGTIDFNEFLEMMTHKMSEKDSKEEILKAFRLFDADETGKISFKDLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY* # PASA_UPDATE: g4635.t1, single gene model update, valid-1, status:[pasa:asmbl_1872,status:3], valid-1 NODE_1528_length_10710_cov_49.7551 . gene 7372 8670 . + . ID=g4635;Name=g4635.t1 NODE_1528_length_10710_cov_49.7551 . mRNA 7372 8670 . + . ID=g4635.t1;Parent=g4635;Name=g4635.t1 NODE_1528_length_10710_cov_49.7551 . five_prime_UTR 7372 7496 . + . ID=g4635.t1.utr5p1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . exon 7372 7523 . + . ID=g4635.t1.exon1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . CDS 7497 7523 . + 0 ID=cds.g4635.t1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . exon 7682 7824 . + . ID=g4635.t1.exon2;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . CDS 7682 7824 . + 0 ID=cds.g4635.t1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . exon 7961 8005 . + . ID=g4635.t1.exon3;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . CDS 7961 8005 . + 1 ID=cds.g4635.t1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . exon 8171 8670 . + . ID=g4635.t1.exon4;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . CDS 8171 8291 . + 1 ID=cds.g4635.t1;Parent=g4635.t1 NODE_1528_length_10710_cov_49.7551 . three_prime_UTR 8292 8670 . + . ID=g4635.t1.utr3p1;Parent=g4635.t1 #PROT g4635.t1 g4635 MCKHILNAQVSIRTPCCKKWFDCPECHAESEKHEILKTNEMIFGCKKCKKVFRKDLNEYDDSDEYCPGCDNHYVIDAKEPVQEVYIQGDENMIRDGRDPRRAAAGGDLPPM* # PASA_UPDATE: g4634.t1, single gene model update, valid-1, status:[pasa:asmbl_1867,status:13],[pasa:asmbl_1868,status:12], valid-1 NODE_1528_length_10710_cov_49.7551 . gene 5779 6874 . - . ID=g4634;Name=g4634.t1 NODE_1528_length_10710_cov_49.7551 . mRNA 5779 6874 . - . ID=g4634.t1;Parent=g4634;Name=g4634.t1 NODE_1528_length_10710_cov_49.7551 . exon 5779 6874 . - . ID=g4634.t1.exon1;Parent=g4634.t1 NODE_1528_length_10710_cov_49.7551 . CDS 6242 6874 . - 0 ID=cds.g4634.t1;Parent=g4634.t1 NODE_1528_length_10710_cov_49.7551 . three_prime_UTR 5779 6241 . - . ID=g4634.t1.utr3p1;Parent=g4634.t1 #PROT g4634.t1 g4634 MTPFPPPNRSRCDSRPTTDMVSTKCVALFLVVMVLAANACVEGAARAGGKRNKNAVKTPGGENGQDEVGLEQLGEMLGSLFGGGGGAGGLFGMGLGADSCSYACPNGEKPLPNPEHVATSNGCGVEGMKLDVPELEPCCDEHDFCYDTCLSKKTECDNKFRACMQRVCDSKETDELRLECNNNAELFHFGTAGFGCAAFQKSQKVACLCP* # ORIGINAL: g4633.t1 original gene structure, not modified by PASA NODE_1528_length_10710_cov_49.7551 AUGUSTUS gene 1631 3725 . - . ID=g4633;Name=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS mRNA 1631 3725 . - . ID=g4633.t1;Parent=g4633;Name=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 3582 3725 . - . ID=g4633.t1.exon1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 3582 3725 . - 0 ID=cds.g4633.t1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 3117 3271 . - . ID=g4633.t1.exon2;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 3117 3271 . - 0 ID=cds.g4633.t1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 2775 2839 . - . ID=g4633.t1.exon3;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 2775 2839 . - 1 ID=cds.g4633.t1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 2308 2415 . - . ID=g4633.t1.exon4;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 2308 2415 . - 2 ID=cds.g4633.t1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 1890 2098 . - . ID=g4633.t1.exon5;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 1890 2098 . - 2 ID=cds.g4633.t1;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS exon 1631 1762 . - . ID=g4633.t1.exon6;Parent=g4633.t1 NODE_1528_length_10710_cov_49.7551 AUGUSTUS CDS 1631 1762 . - 0 ID=cds.g4633.t1;Parent=g4633.t1 #PROT g4633.t1 g4633 MEVDMQDQPQFSLANFVIEKKIGRGQFSVVYRARYLVDNSIVALKKVQQLNHPNVIKYLASFIEDNELNIVLELADAGDLSRMIKHFKKQGRLIPEKTIWKYFVQLCSALDHMHSRRVMHRDIKPANVFITASGIVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPEDIFSEELRNLVHLCINSDPDQRPDIRYVLDVANQMHTHFQGSARPSSGN* # PASA_UPDATE: g4632.t1, single gene model update, valid-1, status:[pasa:asmbl_1870,status:12], valid-1 NODE_1528_length_10710_cov_49.7551 . gene 50 749 . - . ID=g4632;Name=g4632.t1 NODE_1528_length_10710_cov_49.7551 . mRNA 50 749 . - . ID=g4632.t1;Parent=g4632;Name=g4632.t1 NODE_1528_length_10710_cov_49.7551 . five_prime_UTR 742 749 . - . ID=g4632.t1.utr5p1;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . exon 645 749 . - . ID=g4632.t1.exon1;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . CDS 645 741 . - 0 ID=cds.g4632.t1;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . exon 408 462 . - . ID=g4632.t1.exon2;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . CDS 408 462 . - 2 ID=cds.g4632.t1;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . exon 50 243 . - . ID=g4632.t1.exon3;Parent=g4632.t1 NODE_1528_length_10710_cov_49.7551 . CDS 50 243 . - 1 ID=cds.g4632.t1;Parent=g4632.t1;3_prime_partial=true #PROT g4632.t1 g4632 MYNGPPRAGARGGRDQFEWDSVKADKHRENYLGHSVMAPVGRWCKGKDLTWYAKDAEALKDMAREELAAVKAREAEALASALGYGPPIRSLGTTADPGATAGLTGVCPCVCVCVC # ORIGINAL: g5761.t1 original gene structure, not modified by PASA NODE_778_length_17813_cov_41.9517 AUGUSTUS gene 1359 7212 . - . ID=g5761;Name=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS mRNA 1359 7212 . - . ID=g5761.t1;Parent=g5761;Name=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 7057 7212 . - . ID=g5761.t1.exon1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 7057 7212 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 6587 6733 . - . ID=g5761.t1.exon2;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 6587 6733 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 6262 6360 . - . ID=g5761.t1.exon3;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 6262 6360 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 5846 5997 . - . ID=g5761.t1.exon4;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 5846 5997 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 5505 5631 . - . ID=g5761.t1.exon5;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 5505 5631 . - 1 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 4653 5311 . - . ID=g5761.t1.exon6;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 4653 5311 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 3867 4489 . - . ID=g5761.t1.exon7;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 3867 4489 . - 1 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 3396 3661 . - . ID=g5761.t1.exon8;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 3396 3661 . - 2 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 2951 3156 . - . ID=g5761.t1.exon9;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 2951 3156 . - 0 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 2568 2696 . - . ID=g5761.t1.exon10;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 2568 2696 . - 1 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 1677 2224 . - . ID=g5761.t1.exon11;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 1677 2224 . - 1 ID=cds.g5761.t1;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 1359 1528 . - . ID=g5761.t1.exon12;Parent=g5761.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 1359 1528 . - 2 ID=cds.g5761.t1;Parent=g5761.t1 #PROT g5761.t1 g5761 MLCASRRVFGGHTTWAASLTANARASASLNCVTVIKSANRPYSSEVDAADASLVEEGPIRARVTDDLYAWQRANSSGSDYVLHDGPPYANGRPHVGHFLNKILKDVIVRYRILRGHRVHYVPGWDCHGLPIEQKVFEGQHVDAIKAMSPVDIRSSARRFALAAVEEQKQEFRSWGITADWANAYKTLEAEYEANQLGVFFKMYANGHVYRGHKPVYWSPSSRTALAEAELEYKDDHESTSVYVMFLVAAKGALADAVLRVPGVDPQHIPRVRAAVWTTTPWTLPANTAVCVNPSALYTLTWSVERTELVLAAEALLPVLKEKGIVHASSVDGEAIASVSGSMLTDSHCVHPLDNARLSPIVTGSHVTTDTGTGLVHTAPGHGHDDHAVGLKFKLNMLCPVDGEGAFTADVGFPTLIGKKVLGEGNDAVVDMLRQAGALALTEKIKHRYPCDWRTKKPVIIRATRQWFTSITHIKARAKELLADVSMYPPASRNRLESMLDGRDDWCVSRQRCWGVPIPVFYIKSPTADAKSEYLLNEATVKHLQAIFREHGSDAWWKMSVQDLLPEEYKGAAANYEKGSDTMDVWFDSGSSWATVLPSRPGPNAATPYPYADLYLEGSDQHRGWFQSSLLACVASTDHAPYRAILTHGFVLDEQGRKMSKSLGNVVDPSFLVKGDKPRAQAPAEPELQQQQQQQQQQQQQQQQQQQQQNRNAKKEKVKKPKDADDVPQGYLRTGYGVDLLRVWAAMSNYSSDVLIGPTLLATTGETLRKLRNAMRFMLGNLAGFDPKTGNVPYEDLEPIDKYALHRLAQLCRTAESAYDSYAFGKVVQSLSLFVVSDLSAFYFDVVKDRLYTEERNGLRRRACQTVLSHILQCTVRIAAPITPFVTEEVASHASSDAPLAASLFPNNGGAFRCGWAVWDPAWESHQLEVTWQTIRAVRHVANRALDASRRAQLIGAAVDADVELVVERGSDLEEALRFVESRASTAFLADVLVTSDAKVTLVDKGALSSDAEAAAPPEVRSDGTVVIAAYVDDGEGHTAEPSATTKSAPAPCISRNAVKVVVSKPAHSKCPRCWRYTAHSEGCLCGRCANIVG* # ORIGINAL: g5762.t1 original gene structure, not modified by PASA NODE_778_length_17813_cov_41.9517 AUGUSTUS gene 7659 17813 . + . ID=g5762;Name=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS mRNA 7659 17813 . + . ID=g5762.t1;Parent=g5762;Name=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 7659 7933 . + . ID=g5762.t1.exon1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 7659 7933 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 8150 8246 . + . ID=g5762.t1.exon2;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 8150 8246 . + 1 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 8417 8509 . + . ID=g5762.t1.exon3;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 8417 8509 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 8743 9660 . + . ID=g5762.t1.exon4;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 8743 9660 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 10006 10545 . + . ID=g5762.t1.exon5;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 10006 10545 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 10804 11409 . + . ID=g5762.t1.exon6;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 10804 11409 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 11615 11846 . + . ID=g5762.t1.exon7;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 11615 11846 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 12001 13908 . + . ID=g5762.t1.exon8;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 12001 13908 . + 2 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 14117 14346 . + . ID=g5762.t1.exon9;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 14117 14346 . + 2 ID=cds.g5762.t1;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 14463 17813 . + . ID=g5762.t1.exon10;Parent=g5762.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 14463 17813 . + 0 ID=cds.g5762.t1;Parent=g5762.t1 #PROT g5762.t1 g5762 MASNVSSAHVAADPLEPVVASASGCQLGFVEDRLKDRRRLARFLVNNTLLGRWELARSAVPLLAKTDALAADAPSVADMLASIANDPSGLKSVRTSSVPSLHHLAWLSYADLIEHCKEKGEDVKSYVSERHAQNLEIALLLESLFPKHPDSKEDDALFTHFSRLVIRCDASIDAAAVALFGDSAVDARIRRAVEEDTALVASLAERIGELGFVNLRSNVVLQKAMVESAESALADARWERVLELLFFMNPTPEMTSDVGVKRLFGSMTAQPSYFASDSTADSQPGRPGLRTRVHAILCGKASAHLATILGEAELDAERMSPNILPLALQRYVDADSTARPSRAGLKSASQSSLRESLGSVASFDLSVSTGGDVADSATMPSSQAVMDDAFRFVLARRRHFWEDCLHIAAEWTRRGDYGRIERLLDVAALAPLRPYVLLMNWGRCADLASRRRLLKAAWLKWDTTRKISADSAEHVPSPSMSHDPALVAACRRLVAHIGLCDWIREHFADRDAPVEGVDPAWAAREAEALSSVDILRAMNVAQTAMAVSMSPMAAPVNGMSSPPSTTPLPQRGALPSPTVFASARSSSWPSDDDVLLSDASSCPLDPLCALAILARLRLLSHCSEDIVSALLSQQESLVPAKEGTISDMQWYKCVCVLHRLHGVLIDASDSIKTSQALAEADAIAHDIQTPTPLLNLLEDSLALLYARRPQPMPFGGEHNRNSSNNFDGGMDSRSSSFAGASVVGGISPQMSRDRAASVASASLVAADAEVDLVANRASFGALIGWISRWSQAVANGAGSAFADDGANAHGVRIAKLLADVDDARWRFDVACALRDGTAETTNQPFAAGIFATPAQFLVTCLRAGNHDLAAKVIARYRDKTIDGGAQALTDEFVEEAVFCGEFDRIARAVVDGTPGALDSADAFIDSLPILQAVSVAVDLAVAHAPDAQTGLALLERAISLESRALARAAEQSAVDPLSPASQCVANVLSFARTLIAVVRHYETLSPRDALMTVEGPLGENASSFIAREKMFALQGEAVVAFGATSEAAVPIDSAAGSRGGRRIPTTERQQSDDGSAWSAGGGRRPNSSRTRRKSAKGLRKSLGELARAFSTQLGDGWPNPGWTGSQTPRRDSMTAPSQSSYEYVPKFVQYIEMVGSVFPPSIFDDVGPDDDRRVTVCVDPDSAPDSSAIATQPLHSLSSMQSSSVVAAAPPPTAADDARMLAVNPLRVLRVSPRRAIERLVFELGQYEAAERAAARLSIDMAGVLVDATCAGIPLARADDDGDGSVWSSRDKGVNQGVRALPNDGAPLNLLYVPARVDAAPASGAPAASTATPDGTLASSSKPALSIVLPSSGRLLPPGSPSAVRSLLTQQQQHRTPPSSPLLAPMSPTTGGGFLGAGAGLNVVMVSASLLDRLNDLFTSMADSDGFFSGERASVLSCVADGRTCEDIAFPAPSGAHVARFVAFEAESHRMLPSLRVDGLSSVEKLCFWCNVHNVMFAHALVRMSPQPCAAVEWPVRAHVLRYAVGTRDGQGRTVTGLETLCCKLRRGLPPPKIIIADAFLAMASTLDTDENTEDSAGDIGVWDPRAVFVLSWGARSFPQPVSLRPDSLDDVLSKAASAYFDSEVVVDVQEQKIILPRLLEWFRDDYVPVYGKVSPQQQQQQQQQQHQQQQQHQTLSPDPSLLAALRFVLAHASPALSACIRSLGMTSGKSQAPSSRPLSIMPDRTSGLDRAKVDMTAASGATPAQSFQLEPTVQLVSGEFSWDAGYSFSAKARAQRLRSNSLSVGSGGNPRLREIPARYPLTETVFKKLRDEFPALAALASVMHPGAEYHTDSQSYVNRALADTFPLQPLHRLFALRFTPLLDTLADVAKELTPTELLGLLDGDGGAREAAGWRLVDRFSAEGRYVDALKVADDGLVPRVPDFILCALASAQSPASSDGRVATKGDDGVDEGKGQTWRYIARMESKSLAAAMALSRLSSWPIGECISLLEMCGCHLGPSHPLYDRVYAKLKELRVYSDILPLVPACRGDWVQLDEMKRKSPVAVFDALVAGRAFDLAHCWAVVCKSCRLQSEADQMRLLHLLEGGDVFEAHTFLAGLDVSAPLACCDGVVARTVDLPMRLRVCRFVIDSMGPLLPPNRLDELRQLETGLQMVTCLPSDSQPLYEPLQRWPHLIVEQTLMDANVALTAKVFASFPETEDASLLSTYALKALEIPVSVKGRTAPHPQPQPQPQPLQPQHQPTPAREASANPLLSLRDSIMSTFRDGPLQDISVDAPVPTSAPSSNRHTPTGVLSPRASPKAARASLAPQSQSLQAASPSPKLTASPSSAEKARVPAMASSWVPDDQAKGCMVCGNAFSLFNRRHHCRVCGRVVCGECSAGTALRTGSDKAVRACDDCVAGVKIVNPNGDGGEWIPPLSLNASVMSLGPASTDGVAVAPGSSSRTADIQPTTARTLGGGVSASGAVSTETEHENAKTTTALVDDASERRVFLTAFQATPDAKRPFVLTGDAVADERTRASFVYGAAPSISLALAIVNLMTDVRECARTCLRLCNELSQQLTAETAEFSADSSRDGDADSADGRWGSDRFALVNMMQRLVFTAKVKFAMRASNAPSSRLSVDSDGDGVFEDGVSMCDTILGHVDLLRLLIGAGCAEGVTLATLSTPDKARGLLERLIEDDRIALAMELATKCRLDSVPVWAAWGLQKLKAGAWDEARDKLRRCFASSDGEGSLQNHGMFGASSANTAGGGGGG # ORIGINAL: g5760.t1 original gene structure, not modified by PASA NODE_778_length_17813_cov_41.9517 AUGUSTUS gene 95 387 . + . ID=g5760;Name=g5760.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS mRNA 95 387 . + . ID=g5760.t1;Parent=g5760;Name=g5760.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS exon 95 387 . + . ID=g5760.t1.exon1;Parent=g5760.t1 NODE_778_length_17813_cov_41.9517 AUGUSTUS CDS 95 387 . + 2 ID=cds.g5760.t1;Parent=g5760.t1 #PROT g5760.t1 g5760 PWMCQSPSSSCHNRTHFHVQPDTCFVLTATTVKLAALGRGVTGDRLSRHPWTLKSPHSMPTLQPDKRRLRLMWLSIAGSSMSLRGERPWVCSALNLD # PASA_UPDATE: g3264.t1, single gene model update, valid-1, status:[pasa:asmbl_4956,status:12], valid-1 NODE_2763_length_5194_cov_36.2987 . gene 4484 4913 . - . ID=g3264;Name=g3264.t1 NODE_2763_length_5194_cov_36.2987 . mRNA 4484 4913 . - . ID=g3264.t1;Parent=g3264;Name=g3264.t1 NODE_2763_length_5194_cov_36.2987 . exon 4484 4913 . - . ID=g3264.t1.exon1;Parent=g3264.t1 NODE_2763_length_5194_cov_36.2987 . CDS 4665 4913 . - 0 ID=cds.g3264.t1;Parent=g3264.t1 NODE_2763_length_5194_cov_36.2987 . three_prime_UTR 4484 4664 . - . ID=g3264.t1.utr3p1;Parent=g3264.t1 #PROT g3264.t1 g3264 MPAGREVIQPTVVDPISFDAWRKEAFALWNRQWAMRYPEGSIPRNVVSGVADTFFLVNVVDNDYIRGDLFAVFRALCGTAST* # ORIGINAL: g3262.t1 original gene structure, not modified by PASA NODE_2763_length_5194_cov_36.2987 AUGUSTUS gene 535 2296 . + . ID=g3262;Name=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS mRNA 535 2296 . + . ID=g3262.t1;Parent=g3262;Name=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 535 828 . + . ID=g3262.t1.exon1;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 535 828 . + 0 ID=cds.g3262.t1;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 973 1021 . + . ID=g3262.t1.exon2;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 973 1021 . + 0 ID=cds.g3262.t1;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 1374 1479 . + . ID=g3262.t1.exon3;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 1374 1479 . + 2 ID=cds.g3262.t1;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 1662 1762 . + . ID=g3262.t1.exon4;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 1662 1762 . + 1 ID=cds.g3262.t1;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 1968 2296 . + . ID=g3262.t1.exon5;Parent=g3262.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 1968 2296 . + 2 ID=cds.g3262.t1;Parent=g3262.t1 #PROT g3262.t1 g3262 MTLVGGSQMQCVREATTRIPFLVPFDVTTTLSTAATHEQIVTETAPVVAMAALPSPGGAVAADSAEVDAGETLVLLAETKCTSQSASLEIVRTELILAGPFRKLEVDATPQVANVAVEPSDAVSECHAVAVPDVPMPGTQLGTFVIHWRRTKGTPGIDPSTTFKTELQLPSVAVESAPFSVVSRVPAYGRVNTIVPVMYTIRNNTAQVQDLELAMEPSDAFMFSGFKSTRIRILPRSSRSVPYNLFPLGPGLSQLPTLRIRARRYEHEVPRRRKPSHIYILTEDAISAAGSN* # ORIGINAL: g3263.t1 original gene structure, not modified by PASA NODE_2763_length_5194_cov_36.2987 AUGUSTUS gene 3000 4268 . + . ID=g3263;Name=g3263.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS mRNA 3000 4268 . + . ID=g3263.t1;Parent=g3263;Name=g3263.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS exon 3000 4268 . + . ID=g3263.t1.exon1;Parent=g3263.t1 NODE_2763_length_5194_cov_36.2987 AUGUSTUS CDS 3000 4268 . + 0 ID=cds.g3263.t1;Parent=g3263.t1 #PROT g3263.t1 g3263 MDHHDNGMPVAPLVNQGPPSFCLNCGKPGRCNPYRGRCTPPRIDDAALGVPDGFVASVIVPMSGLSMFLLKDNRIERLAAIVDVDSKVHFLRRFSKLFYDLCDSWPDHDVCGETINAFILDEEKKANTNAAHVAGEGPATDATSSTTVVTSTDVYLCLDCEVGRRATASVPCSRHGSSPSVPQPSCCVHHILQCSTCGCLLCKGCATTCDVCNQPSCDRETVRCRPPCERGMTICYMCEQPGEWCEGCNEIACCHTHVGRCALCHHYFCTEITHMPDCVICSFCYDDFYRADPTDPQMTDAQVDRVIADYDDGFDWGDGKGKVVLKFLVESGHDYLLFDRRKYRKMMFPHLTRLLKAKAYRTVARCIELRVLWNPFHPVGIRRVQAGFDALKRERQLALSGNANINPNATESEDSGMCLITE* # PASA_UPDATE: g10225.t1, single gene model update, valid-1, status:[pasa:asmbl_105,status:3], valid-1 NODE_102_length_39807_cov_42.8872 . gene 9532 13455 . - . ID=g10225;Name=g10225.t1 NODE_102_length_39807_cov_42.8872 . mRNA 9532 13455 . - . ID=g10225.t1;Parent=g10225;Name=g10225.t1 NODE_102_length_39807_cov_42.8872 . five_prime_UTR 13327 13455 . - . ID=g10225.t1.utr5p1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 13243 13455 . - . ID=g10225.t1.exon1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 13243 13326 . - 0 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 12960 13053 . - . ID=g10225.t1.exon2;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 12960 13053 . - 0 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 12558 12635 . - . ID=g10225.t1.exon3;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 12558 12635 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 12047 12252 . - . ID=g10225.t1.exon4;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 12047 12252 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 11808 11880 . - . ID=g10225.t1.exon5;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 11808 11880 . - 0 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 11539 11688 . - . ID=g10225.t1.exon6;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 11539 11688 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 11339 11432 . - . ID=g10225.t1.exon7;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 11339 11432 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 10914 11191 . - . ID=g10225.t1.exon8;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 10914 11191 . - 1 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 10435 10668 . - . ID=g10225.t1.exon9;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 10435 10668 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 10195 10259 . - . ID=g10225.t1.exon10;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 10195 10259 . - 2 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . exon 9532 10082 . - . ID=g10225.t1.exon11;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . CDS 9594 10082 . - 0 ID=cds.g10225.t1;Parent=g10225.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 9532 9593 . - . ID=g10225.t1.utr3p1;Parent=g10225.t1 #PROT g10225.t1 g10225 MRTCNNCGGADIDVDPARGNAVCTKCGYVLEDNIIVSEVTFTDSNNGGNSVVGQFVSAEGPKSCSIAPGFHHGFGRESREVTLSNGRRRIATVAAALRLNGHHVEAAQQYFKLAVQYNFIQGRKTTHVVAACLYIVCRTEQTPHMLLDFSDVLQVNVYTLGSTFLKLCRTLNIRVPIIDPSLYIFRFAHKLEFGEKTHDVAMTALRLVARMKRDWMQVGRRPAGICGAGLLIAARMFGFSRTQKEIINIVRICDVTLRKRLDEFEDTPSGGLTPHEFQTIDLEEECDPPSFVQARKRARLKASSQQHALPTSAGRDAAAGLRLLTAAGEEAIEAEMRRVLDSDEFRRMDTDAAGATGQSSQALLAAQHAAVLRPPNRGSIAAPASHQDDADNLSDAEDSEVEEMILTADEAQIKAQIWNEMNREYIEEQAEKERLEAVAKEEGTSRAPVERKRKKRRSDRKPADPAENPQQAIRQMLASRKMSKKINYAVLEGLGEGGQEGVLGDGDGDKPPSTNVEDARARAFSRAATPLSMFAPRLDSRIHPDGGEHVRFGKEEVDDSRGAVYEGGDGGNGDGDGADSVHATEECPEDEENLAAVLGYSVNDALQDDDYDDD* # PASA_UPDATE: g10231.t1, single gene model update, valid-1, status:[pasa:asmbl_103,status:12], valid-1 NODE_102_length_39807_cov_42.8872 . gene 24393 25689 . + . ID=g10231;Name=g10231.t1 NODE_102_length_39807_cov_42.8872 . mRNA 24393 25689 . + . ID=g10231.t1;Parent=g10231;Name=g10231.t1 NODE_102_length_39807_cov_42.8872 . five_prime_UTR 24393 24427 . + . ID=g10231.t1.utr5p1;Parent=g10231.t1 NODE_102_length_39807_cov_42.8872 . exon 24393 24647 . + . ID=g10231.t1.exon1;Parent=g10231.t1 NODE_102_length_39807_cov_42.8872 . CDS 24428 24647 . + 0 ID=cds.g10231.t1;Parent=g10231.t1 NODE_102_length_39807_cov_42.8872 . exon 24746 25689 . + . ID=g10231.t1.exon2;Parent=g10231.t1 NODE_102_length_39807_cov_42.8872 . CDS 24746 25641 . + 2 ID=cds.g10231.t1;Parent=g10231.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 25642 25689 . + . ID=g10231.t1.utr3p1;Parent=g10231.t1 #PROT g10231.t1 g10231 MAFANEAGVSTITRPPPSYPLRSSVLPAPSAATTRPLVEESEAAILLEVKFGIRSVRLKPLPSYDDQNYHVTAENGTEYVLKIHNVNEDETILAMQNALIQHLDVRGVPVSTVCPTSDGGTMVRHVTSAGEMHIVRVLKYVPGVLLRDVGHTPALLRDLGSFLGRMDRELADFSHPAAHARVLHWDIVQVLDSRSYLGDVVDPDRRRLLCDALAAMEERVLPRLVTLRRAVVHNDAHELNVLVHPTEPRITAIIDFGDAVCTAVACNVAIAQAYAMMLTLNEQCDSSLLGQPAVAFAAVREGYAAVHPLTREEHDLLPWLVLGRLCISVLSSAHKQHLFPHDEYVRVSEKPAWALINLMWPLLSEGHSFAD* # PASA_UPDATE: g10232.t1, single gene model update, valid-1, status:[pasa:asmbl_109,status:3], valid-1 NODE_102_length_39807_cov_42.8872 . gene 25754 27111 . - . ID=g10232;Name=g10232.t1 NODE_102_length_39807_cov_42.8872 . mRNA 25754 27111 . - . ID=g10232.t1;Parent=g10232;Name=g10232.t1 NODE_102_length_39807_cov_42.8872 . five_prime_UTR 26963 27111 . - . ID=g10232.t1.utr5p1;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . exon 26942 27111 . - . ID=g10232.t1.exon1;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . CDS 26942 26962 . - 0 ID=cds.g10232.t1;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . exon 26725 26850 . - . ID=g10232.t1.exon2;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . CDS 26725 26850 . - 0 ID=cds.g10232.t1;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . exon 25754 26625 . - . ID=g10232.t1.exon3;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . CDS 25822 26625 . - 0 ID=cds.g10232.t1;Parent=g10232.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 25754 25821 . - . ID=g10232.t1.utr3p1;Parent=g10232.t1 #PROT g10232.t1 g10232 MLTIKLKFGDDVRRLSVLEPETLSWEALLANVVQIFSVDSDVVIKYLDEEGDHITVACDDDVVQAIKIAHERQEDVLRIIVKGRRRSQSSLLEDPIPANDQRQETECGNTSGAQAPPSVWEPSLFELLANEAYYGGLILQNSVSSAFRRAKESEIVGVLRERVRRTSESARDHLSAVSNALEEALTDIVGDVNADEDRSCAPEDRGEDLLLGIDQTSTETSATTTTAQCTKATAALRDPSAPLRQQVTNNATAVGMTDAAVGDDDDYVVVTQPEFSGPYAGQLRTLVDMGFERSVGEALLIVHKGDVRAVLEELTA* # ORIGINAL: g10230.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 23585 24121 . - . ID=g10230;Name=g10230.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 23585 24121 . - . ID=g10230.t1;Parent=g10230;Name=g10230.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 23961 24121 . - . ID=g10230.t1.exon1;Parent=g10230.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 23961 24121 . - 0 ID=cds.g10230.t1;Parent=g10230.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 23585 23708 . - . ID=g10230.t1.exon2;Parent=g10230.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 23585 23708 . - 1 ID=cds.g10230.t1;Parent=g10230.t1 #PROT g10230.t1 g10230 MRSMAVVVVRLLFFARTRELAGVGAIDSFPVEVEDDGALRGEELLARIIASIPSLGPLESSVALAVDHEYVALDGRVPLRDGSEVAVIPPLSGG* # ORIGINAL: g10226.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 13750 16444 . + . ID=g10226;Name=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 13750 16444 . + . ID=g10226.t1;Parent=g10226;Name=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 13750 14287 . + . ID=g10226.t1.exon1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 13750 14287 . + 0 ID=cds.g10226.t1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 14423 15200 . + . ID=g10226.t1.exon2;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 14423 15200 . + 2 ID=cds.g10226.t1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 15571 15725 . + . ID=g10226.t1.exon3;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 15571 15725 . + 1 ID=cds.g10226.t1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 15891 15997 . + . ID=g10226.t1.exon4;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 15891 15997 . + 2 ID=cds.g10226.t1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 16127 16199 . + . ID=g10226.t1.exon5;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 16127 16199 . + 0 ID=cds.g10226.t1;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 16371 16444 . + . ID=g10226.t1.exon6;Parent=g10226.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 16371 16444 . + 2 ID=cds.g10226.t1;Parent=g10226.t1 #PROT g10226.t1 g10226 MVLPVVRTTAHRLRTRADAVRCASTAASVASPPKWNQTAHLVSSHGQLRSDYDAVIVGGGHNGLVCAAYLARAGLSVAVLERRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPVVARELDLKRHGLRVHLRNPSSFTPLPDGRSLILGADHSANHAQISQFSVKDADNYATYEAMLDRFVKAIDPLLDSAPADASSLASGGVGAALRARHSLRPLLRAAWELRKEMPQFVELLTAPATNILSRWFESEPLLSTLATDAVIGAMASPYSPGSGYVLLHHVMGELEGVRGAWGYAEGGMGAVSAAIGSAAKEAGAHLFADANVAHVIIEGGRATGVALQDGTRIRARAVLSNATPQRTYVDLVGAQHLPHEFFGDVSRIDYKSPVTKINVAVNKLPNFTAMPTVNNKPGPNHPCTTHLGAQTLAEIHASYTDALSGRVSSRPVIEMCVPSALDPTIAPPGQHVITLFVQYTPYNLANGSWDDDGARDRFADKVFSIIDEYAPGFSSSVVGRDILTPVDLERIFGLTGGLYMFRQKHRSPLGGLYLCGSGAHPGGGVMGAPGRNAAHVVIADLSRSK* # PASA_UPDATE: g10224.t1, single gene model update, valid-1, status:[pasa:asmbl_102,status:12], valid-1 NODE_102_length_39807_cov_42.8872 . gene 7236 9409 . + . ID=g10224;Name=g10224.t1 NODE_102_length_39807_cov_42.8872 . mRNA 7236 9409 . + . ID=g10224.t1;Parent=g10224;Name=g10224.t1 NODE_102_length_39807_cov_42.8872 . five_prime_UTR 7236 7261 . + . ID=g10224.t1.utr5p1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . exon 7236 7436 . + . ID=g10224.t1.exon1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . CDS 7262 7436 . + 0 ID=cds.g10224.t1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . exon 7639 7745 . + . ID=g10224.t1.exon2;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . CDS 7639 7745 . + 2 ID=cds.g10224.t1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . exon 7987 8163 . + . ID=g10224.t1.exon3;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . CDS 7987 8163 . + 0 ID=cds.g10224.t1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . exon 8446 8613 . + . ID=g10224.t1.exon4;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . CDS 8446 8613 . + 0 ID=cds.g10224.t1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . exon 9012 9409 . + . ID=g10224.t1.exon5;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . CDS 9012 9362 . + 0 ID=cds.g10224.t1;Parent=g10224.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 9363 9409 . + . ID=g10224.t1.utr3p1;Parent=g10224.t1 #PROT g10224.t1 g10224 MAYDIEVLSRAVAAAAIGALVAAIGLRLLTRRRGWRQGAAFFRNKVVWVTGASSGIGEELVYAFHRCGARLIISARRTEELARVRAECDRRMQQDAHEGDERDALPPRIVQLDLANTNALASKASEALGCYGHIDVVVHCGGISSRGFAVDTMLSVDTELMAVNFFGPVAITKALLPSMIARRSGHVVAISSVQGLVGIPSRAAYAASKHALHGFFNSLRAELSPANVDVTVVCPGYVRTSLSLNARSANGSPHGVMDDATARGMLPEQLAAHILIAVQRREAEIVVADGSARAAVWLQRWFPRLLRALLARRAAKELVSHAHQS* # ORIGINAL: g10222.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 2531 4213 . + . ID=g10222;Name=g10222.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 2531 4213 . + . ID=g10222.t1;Parent=g10222;Name=g10222.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 2531 4213 . + . ID=g10222.t1.exon1;Parent=g10222.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 2531 4213 . + 0 ID=cds.g10222.t1;Parent=g10222.t1 #PROT g10222.t1 g10222 MACEPRGTDTERHDPWIASCCASVMVRARYQGSNPFDEDAAVRAWPFWSRVDGRVALSASALVVSAQAGVIIACAQFVRAFIPFKCKRAVEDGHESVLVDVLESPSFAVAPPLRQWRSARIVRFFRAPCLATALSSVVGRQDGWCIGWSPSSSSDHLESATEFVLLQCLSQLDCSYPAICNVFPTKAAPVFVDASPYGILSPAVFGGSISQGIVSNTVSDPAGAVVLALIDARCPPGSDGGAVFVHTAGKLSVVGMVLPPLRRSDGESVELCPVVPIRICLDAAGVLPTEFRELASVPVCGSSSIISEKHSTPAQLYRNVVMVRAGSVWGSGVVVSSGGLVVTNAHVVSAATSFGGVSVRLAGGTHVAADVLFVSPGNPDIALLQMSGHHTFPQLPIKWEGALQIGTDVFVVGYPLFGPSCTSLDATICRGSLSRSVDGTLIQSTAAVHRGNSGGLLVSASGLALGIVTSNARDTDGRVMPRLNFSVPFSAMTPLRYICESTKGRVTCEVIKPLIEAAGLGKPDLRVDSSWALRDIPDFMESRLESSEFARYFRDMRSKL* # ORIGINAL: g10227.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 16509 18658 . - . ID=g10227;Name=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 16509 18658 . - . ID=g10227.t1;Parent=g10227;Name=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 18542 18658 . - . ID=g10227.t1.exon1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 18542 18658 . - 0 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 18281 18345 . - . ID=g10227.t1.exon2;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 18281 18345 . - 0 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 18054 18156 . - . ID=g10227.t1.exon3;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 18054 18156 . - 1 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 17809 17888 . - . ID=g10227.t1.exon4;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 17809 17888 . - 0 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 17597 17699 . - . ID=g10227.t1.exon5;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 17597 17699 . - 1 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 17336 17425 . - . ID=g10227.t1.exon6;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 17336 17425 . - 0 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 17088 17118 . - . ID=g10227.t1.exon7;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 17088 17118 . - 0 ID=cds.g10227.t1;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 16509 16954 . - . ID=g10227.t1.exon8;Parent=g10227.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 16509 16954 . - 2 ID=cds.g10227.t1;Parent=g10227.t1 #PROT g10227.t1 g10227 MATSRDAHPDFLDAVGRIAAHGASLGNAEKLSFYGLYKQATQGKCDTPRPSLFDMIGKAKWDAWSSLGDMPSAEASRRYIEEADRLVPASARGLKPKGAGAEDRSGFVVVSQPARLDDDDIGDDAKRLVDWCKEGDCERVAAAIHSNEDVNALDDTGMGPLHWACDRGHESVVALLLRCGADVGVRDAEGQTPLHFASACDHESVLRLLLDAGADPGARDNDGLLPADVASSERIRRLLAGDRLPLAPKTTAICTVQIVQTQGDELGLSDSDVGLSDGEGVPAVVSSRKTSAGKSWPVSVWLRAQWHRRGGWVAMALSATVVSMLIYVALQRRRRAVPIRFMRR* # PASA_UPDATE: g10223.t1, single gene model update, valid-1, status:[pasa:asmbl_104,status:3], valid-1 NODE_102_length_39807_cov_42.8872 . gene 4587 7031 . - . ID=g10223;Name=g10223.t1 NODE_102_length_39807_cov_42.8872 . mRNA 4587 7031 . - . ID=g10223.t1;Parent=g10223;Name=g10223.t1 NODE_102_length_39807_cov_42.8872 . five_prime_UTR 6936 7031 . - . ID=g10223.t1.utr5p1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 6864 7031 . - . ID=g10223.t1.exon1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 6864 6935 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 6561 6682 . - . ID=g10223.t1.exon2;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 6561 6682 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 6110 6263 . - . ID=g10223.t1.exon3;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 6110 6263 . - 1 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 5777 5970 . - . ID=g10223.t1.exon4;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 5777 5970 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 5565 5673 . - . ID=g10223.t1.exon5;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 5565 5673 . - 1 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 5358 5453 . - . ID=g10223.t1.exon6;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 5358 5453 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 5176 5282 . - . ID=g10223.t1.exon7;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 5176 5282 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 4884 5097 . - . ID=g10223.t1.exon8;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 4884 5097 . - 1 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . exon 4587 4771 . - . ID=g10223.t1.exon9;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . CDS 4634 4771 . - 0 ID=cds.g10223.t1;Parent=g10223.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 4587 4633 . - . ID=g10223.t1.utr3p1;Parent=g10223.t1 #PROT g10223.t1 g10223 MACLTAVTGSGIPVFTRTYGGLVAPSFPTIGALNGVHMFSSSHGVTLVTEESASLRIAWRTFHDSFVLVLVTDTAGPLCVGDNRLLDLAFGALVLVLGIDGVVGTMPSDRLKRDARSAFRLIDSVFDMSGVVSRLLRAAETSYVPDVPIIRKYLDSFAANADSSYACVMCRGSTLAATDSWWKLSIDETSLLASFVASLPGASMHDVPVYLPTASPQVPHRLIVIQPLDGIRVVALCGPSPPLREIDDELFVAHWQPALAVLRAAVEWVPKGFPPSTTIDPGMASATVLHRASRRCFTWTRRAHDSKPDLVVSKKYAIANFIVSMGPFFPEMLDSNEESCIWNGSHHPVELYSTTKEWKIYSLRHAQAVIIGLFDAHVPIYALEALCESVLTSILQAKIFN* # ORIGINAL: g10229.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 22754 23469 . - . ID=g10229;Name=g10229.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 22754 23469 . - . ID=g10229.t1;Parent=g10229;Name=g10229.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 23319 23469 . - . ID=g10229.t1.exon1;Parent=g10229.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 23319 23469 . - 0 ID=cds.g10229.t1;Parent=g10229.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 22754 23166 . - . ID=g10229.t1.exon2;Parent=g10229.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 22754 23166 . - 2 ID=cds.g10229.t1;Parent=g10229.t1 #PROT g10229.t1 g10229 MAKEGTHGSCRVAVAVTNDALSVDGVVALVGDAAAGAISTFIGTTRNNFEGKAVARLEYEGYVAMAERQLQRVCEDASDRWPSLIAVAAHHRLGHVPVGEASVIVAASAAHRRESLEAVGYLIDVLKATVPIWKREIYEDGSSSWKENCECAWAGARAFHGPGDGHGHGHGHGHGHGSFPSPRPEIE* # ORIGINAL: g10228.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 19315 22698 . + . ID=g10228;Name=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 19315 22698 . + . ID=g10228.t1;Parent=g10228;Name=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 19315 19460 . + . ID=g10228.t1.exon1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 19315 19460 . + 0 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 19605 20466 . + . ID=g10228.t1.exon2;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 19605 20466 . + 1 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 20561 21466 . + . ID=g10228.t1.exon3;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 20561 21466 . + 0 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 21606 21777 . + . ID=g10228.t1.exon4;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 21606 21777 . + 0 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 21990 22140 . + . ID=g10228.t1.exon5;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 21990 22140 . + 2 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 22248 22339 . + . ID=g10228.t1.exon6;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 22248 22339 . + 1 ID=cds.g10228.t1;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 22616 22698 . + . ID=g10228.t1.exon7;Parent=g10228.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 22616 22698 . + 2 ID=cds.g10228.t1;Parent=g10228.t1 #PROT g10228.t1 g10228 MTLVTDTLDAPEGPNGRGPSTEPVDSIVCGDVVYAVGGKLEARDAWGQWFPAVIRGVDRSDSALWIHFMNWADKFDEWIPAGEDRLRPALALSAAELKAEAKRRKDELKQRRREEKRARDRALRLAGQQQQQHQQQDSGCTGLPTVEGELDGGPAAVQGNRGFAGACGAAVVDAGHVDTWADGSGHASVRFRCAFPGCDKSFPKKNAMECHTKFAHRGGKKAGAPIGTPAEITGVLGVAHSGAASAHGPAPANSIAVSAKVSTDSLPPAGKRKIATGELANASIANVEDVGVSAVSRKRRSTERDASEGTAGGDGKRRRSGGDQSEDAPGVRAKLKDDDEPFEVLGYRRGQRVLARWQDRRIYPARVAGFNRDGSFNVVFDDGMKYRITTLNIFPYNRELLARQAKKRALAKAAAAASSNGDGVGDGAATFDVTLDATEEGAQKSCASAGPGPGAPPALAAVSSPVCVHAEEDAKRMVSSLTVQPEHPLGNHRRRGRARDRPKTKAERRAERLASSSMKLPARRQRPAVGLAPFSDDKSVVLPPSTPTTPSGPACEPPSARVEGKGAQVGTDNEPAHTVAMDIPESDRASKGVSRGDASQHATRQYVVVVGPSEGDGDTAGGRRSGRLKKQPGVNKRKNDEVIQCCGYEHDHGFMIRCDGCATWQHGYCVGIHQDRVPPKYLCPGCSPVLTTAERGTFANVNATPIVPNGRYRLSDRLRAYGAMQGDALAAMRILRSIRLRESMDRHCVEGGDLAAVSRDHAALAVHLRRLEADCAELDVFNTSPAGTAALNRLLGAYPPAPH* # ORIGINAL: g10221.t1 original gene structure, not modified by PASA NODE_102_length_39807_cov_42.8872 AUGUSTUS gene 673 2108 . - . ID=g10221;Name=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS mRNA 673 2108 . - . ID=g10221.t1;Parent=g10221;Name=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 2011 2108 . - . ID=g10221.t1.exon1;Parent=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 2011 2108 . - 0 ID=cds.g10221.t1;Parent=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 938 1874 . - . ID=g10221.t1.exon2;Parent=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 938 1874 . - 1 ID=cds.g10221.t1;Parent=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS exon 673 786 . - . ID=g10221.t1.exon3;Parent=g10221.t1 NODE_102_length_39807_cov_42.8872 AUGUSTUS CDS 673 786 . - 0 ID=cds.g10221.t1;Parent=g10221.t1 #PROT g10221.t1 g10221 MVAAPVYVLVAHPVRGGQLVIAHGASLKEINFGTCSCRTPPSFDTAALLRSLPDPRPVSVQGDTADGKDDDGALEERVICAAYSSDGALFVACLESKLVAVLRTSDWHVVGIARLVKKATWATFAPGDSAVLVADKTGDVLRFPVVAAVVQETPAALSQEVVLGHLSMILAIAVPPEGDIILTADRDEKIRISRYPRAHNIEGYCLGHTEFVSRICLAPAAFSGALVSCGGDGSVRLWDYRAVVQRGALLADPTASTDSAGPVTLLACAHRLPLAVAAWEGDGDHSATSVSVLRLTLAGITRVGTVQLGHVPTALAFDADDRLWVAVDDDAAPLRCYSWHADEERLSATCFGEVDGTFFARVQGECLFTGTPAVPGIMLCCI* # PASA_UPDATE: g10233.t1, single gene model update, valid-1, status:[pasa:asmbl_113,status:12], valid-1 NODE_102_length_39807_cov_42.8872 . gene 27520 39197 . - . ID=g10233;Name=g10233.t1 NODE_102_length_39807_cov_42.8872 . mRNA 27520 39197 . - . ID=g10233.t1;Parent=g10233;Name=g10233.t1 NODE_102_length_39807_cov_42.8872 . exon 27520 39197 . - . ID=g10233.t1.exon1;Parent=g10233.t1 NODE_102_length_39807_cov_42.8872 . CDS 27567 39197 . - 0 ID=cds.g10233.t1;Parent=g10233.t1 NODE_102_length_39807_cov_42.8872 . three_prime_UTR 27520 27566 . - . ID=g10233.t1.utr3p1;Parent=g10233.t1 #PROT g10233.t1 g10233 MHTAICVFVAALLCAIQGEADGAPNLVLRHGVVRSTNPAVSLSPSGFLPPSFASFVAFNSTTPSKTVAADVAGKPASCNASTTDGGDILTFAVIVSNTGDSPANGVVVSVTPPSGLAGANATTALTVVFGDGSLASFNQLSGGIFGLGIAITKNLSTAVLDGSDVLIVLYDLVVTSAVQLPAAVSVGRAVVAFGAPANTTIVANSMSVTFEQPTFTVAVTGANVTSTSSPLMLTIGSWFELMVMASLPQGFTSNLTIMVTVPALSGSACASLQASLASAASGITMAVGSPTVSSTTLSGDLIVIVAVGNVTVAADGQGGRRVVSARVNMTVLDSAPLVAGVFFYPTAAVSYAVPAMVLSTRNVTIAIAEPSLSFDSLTVAPPSGAVEGGVQFASTVAISALSCSYCSRAYSAVVSVVSSSLPSRLTVMQISVSSVPVGVSAVIESAHAIVLSKIPPGSRVVIAFNTTIGSVARAGESFLMDVQIASFQSVVGGGRTYAAAVVRSHSFIVKNFTLSTSFVTSMAETADNIITVGEMMTVSQSVTLPHGSSAPVCSFRYFAPDNVTAAFIPISVTLTFGSALTNSTLSTGTYLVSSNPAGVDVTAVGTAIVSIGSIVNAPDGVVDARDILQVAVTLALKDVAAVANSVAGSVRMTMASDLTSLSAAIQWSAVEPSLSVHLTSAPLGGVDAADTVTHALVLSHVAGSASPAFVLASSVTLPPAHVIVGSISCAVWNSTIDSDEFVIAFVNQTGGGLAVNVSAPRMSVGNSITCSFNTTLAPAIAIGSSQTYRADVAYSSAPSSLVGRPYKAQAQQVLAVNAPTIAVVPNGIGLAETADPLVAIAEVIRVTVTVQIPEGTSSNFTLSIAGPSALGTAQTTLHNATVLHVGSSLSVALNASRALDPPLAVYGVSNDTATFAFGPLTNWPDNAVNANDTIVVHATFTAGSHAANIRGASLQFTATAALGSNLNPVVASGTLIVAEPVLAVSGVTVAASGDALDEIVFNVTFSHSPLSTAPAFDVAVLQAADILVPALNGTASATVSSLPADSVAWINATAVVASHWRLLTNESLSLVFRCRIVQRVLPSASFANAGTATFGSVPGGGRSASVSGATPFRIDDPTPAMSLLSKSVPDVLIPLTVIHETLEFRAVARLPESSTPFFVEIYLPTKNNALQMIVVNATVLRVGRNLQNSSMKAGDAFGTISANLFSYNQIGNVLSLSFGNVTNLADNTRDDGDEVEVQVFCFIPDVAENVRGEALLLRTSIRYGFLSAIIVFADTTLTVVEPTLAPLISTNATLIDAADDIEYIVTVPHAGASNSPAFKCAVDVTIPASFLLRNSSITAVIVSNDSVPSFAILNGGQRIRFSFSRLLVGGSLIARFVASVRQSVHPDDQYSPVVAGTHNSTMLAAPYQGRAYGPVTAQSLLTVGTPSVTLILAGTSIIDTIGNSVAVHEVFTLEVRVVLPEAQSAVSISLVTSGAGGEAPVQLTTAVVVSVGGSITGARIQTGDAFGANAAISPVIDASLVRTGFVFNLNDVTNVANNIVDDGDSVLLRVQGSVRDVVANLNGAVITATATVQYDGKAHIASTSLVVVEPVLTTTSSALQGSPLDGGDVVTFAFSVGHTAVTSASAAFNVTATITLDPSLQFLQPTVSPLIVGGSDTGAATFFYDSVHESVTVRLARLSLNASLSVVFNATLRQSAAPSSANKAAMAVSFDSSPSDAPLAGRAYVAPATSAAVFTVGATAVFVAKSTSLTSTTGLDMAINERIVLLVNVSLPEGMSPNVTVVVSLPVAGGISLASVVSAGVVLVGPKLNASLSSPVSLLTLGSAPDRAIIRLGRVRNTADNTGVDVVSVEVDAVVRDATANIDGSTLNFDASVTFENGTGTLTLPLTRIGATVRRPVLVMVSGVAPSRVSLASVVRFNVTISHAETSTATAFDLWATFTLDPLLGLATGSLRVGGANLLSAFNATSTGRNTTLAVELASVDVGSVAWIYFTATVSRNVTLGTVLRSFAFLNYTTVNPLPGFPGRIASASAIFPDLAVNFVHVDASLTSTSVPETTGATLCVGETLTLSVTASILGGNASFLMSLVIPRAGGVSLFSVVSATLNTIGRNINGSLLSAGAALDQSPRVTSTAGLLTFDFGVVSHAQSFPLDSDDDATATIVLALSDAPSVSAGSTASLLANATYEGFTVSKAVTIAFVEPFLSLTVSRASRAQGDAGDAFAVALAVAHTASSTAAAHDVTVEVDLALMSAGVPIVVAVGSGDPQPTITVTNGTAAVLTFAKISLGSTVTVSLTTYLSNSAPASAVLTKNVTLSYFSSPAAGLQRRERRASNSSIIIVSPPSVTMSVQSTDLSETVGMDVAIGERVTFAVSVVCPEGVVTRGSVRLSLLGRLAGVPIMTIESASVASVSSKITTQLLSAGDQTPSSGNIVLTASTADAAAMDTVDFTLGDIANQFDNLALPPDTVVLTVTARVLNRAGSMRDLASPAECVLRYTAGASGASFTLNSTALVTVRETRLQISLGCTPSTGDAGDSVVCTATISHLLGSTVAAFHVNVTGALAPFFDRSPGGLTYVIDGGTPVTISPDASVAAESPSLAVGSTMTVRSVCTLSSITAPGVVANQTVALSYASRPRAGMASGSFRDYDGGTSTFSFSTLSPPNVTCVTDFNWPGAGGLVVGLTSVSRMTLQMTEGRAPVKLRLELPAIDGNSGSRRAVSTTTSLLSILDVSLISVGAMLTSIEHNPPVLSFLSRDSLSSSAGPLGALGLSGFIPDSVVIDFGIVVNSPDNVVNGKDSIVVGIESVVRDIPENVNGRRVLFSALADLQTASPVGRSAVAIAEPDLLVNKTPTLPTADINYVRFTLIVRPTSDSLAPAYVVRLNDTLPLELTLVAGSLRVPQGLNHSVILPPESSDNTTRLLFWTDDLSLFPLSTLNITYDALLSSSVAPPARIDTFAVLTYAALPANFTFARKYGPVTSRGSVAKEFAFVRVSEDDHLGTILGTILGTLIGAVAAIVFIVQGLSPERRAKLWPKPTVGPVISPLLGSVPSAGRGMAGAEAGLAVVTHKTRKGRENTDFSEFAHVEGISAYAYMADDALRASERLEDERFEEQRALIADFENARTELYMRRLGCLLGEMVAAGDVDGSLETDLAERAHGALLKAQKAAASVAKSATEKGLRNIAEAVGEKKGRLAAPVDEDGAESRAIDRWAELESRELQGRVAADEHFEIRKALDDITVRVVGEAAARAQYSPARVEDIKGAIDRDIADLDSRLEAQMVMLTAAIQGRTLRRTGLLEVRFALKDERGGFRRARAEQGALLIRRLASEKGLSDTVRAEADDALRKEADHLDKSRALFLAKRDRSLAEKQSQALHDRLQGIVERAADVAAREPTTGNFQDDVSVRLDRRSALFEELQGVTEEADNADIAEWRTMWGEFEAETDKLFASIETRAFAKLAREGASNGDVEVALEKHRDGISKFEAAMSAQRQRQEMDLRRRLAERVAAAATAATQEHEDMAGHRDQGDRVMQRLVDAQVALGDEERDRILRDHENDVNRLVRVLNLSKQRQEQTLRDKMAERRRERLAVVRRQQDEERSTELRRALESSPDEIAHCAARLAEKQNKELETVAETLEEEERVEADRLQDELMKQREAALKSHEDKMAEELSRLQMDKAREEIQIRQAQRVLKNLEEDLVRDLAGKGALSDEASDRALKEHQEGLERLDAAMLDQRQKQQRLLQERLAAKRRRREEALQRKHNDEISRDTGRAESALSGDGPERPQTAQSMSNPTVMRLQMTAKHEMELASLRKNLEMESRQANEDLQRRMDMERLAALESQELRLLGELARGGRLSGDGLEQLLNRAFGQRGQQENRERIRRIVLPASK* # ORIGINAL: g11610.t1 original gene structure, not modified by PASA NODE_1001_length_14895_cov_38.8421 AUGUSTUS gene 2158 3922 . - . ID=g11610;Name=g11610.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS mRNA 2158 3922 . - . ID=g11610.t1;Parent=g11610;Name=g11610.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 3419 3922 . - . ID=g11610.t1.exon1;Parent=g11610.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 3419 3922 . - 0 ID=cds.g11610.t1;Parent=g11610.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 2158 3210 . - . ID=g11610.t1.exon2;Parent=g11610.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 2158 3210 . - 0 ID=cds.g11610.t1;Parent=g11610.t1 #PROT g11610.t1 g11610 MSDASVLFAALGIRHSALCIGARKAGETDSVSRVSQPESQPICTDETAKPSADLASIVKLTEGAIGRTHAVFIDCDGLAYVVGCGSSGLLGLGANVTCVPSLTPLSLLPDVIEDSKAPEGTIRCRAVHAACGPLHSVIVTDDGRVFAFGSGLNGRLGLGDVDVRCTPQELSFFRESQVRIASVSCGDSHTLALSTDGHLYAWGCGHRGRLGNESGEDSLIPVRVTGALSNAIVTSFACGVDFSLAVCKEGSVYSFGCNDESGQLGNNTTERDASTPSQVTWLDSAHPLHAACGDGHACIVSVDGRVFTFGSGAEGALGRGLGPSRSAWADSDRPIEVVGATGAVAVACGEAHTALIVREVASSNSAVLGEVAVVMGNGCNVPRSLCLDTISCGAVTERPSALSLVHTFGRACVIVCGDGRVVCVSGDDASTWEADAPAARVTVLRLLESSPSAPAAVHTNVVRCAWRPSAAVGVVHPTHPPPHQHTTPHTQDASSVHDATTHTGHMSAARESKSCVLL* # PASA_UPDATE: g11612.t1, single gene model update, valid-1, status:[pasa:asmbl_5,status:3], valid-1 NODE_1001_length_14895_cov_38.8421 . gene 8034 11690 . + . ID=g11612;Name=g11612.t1 NODE_1001_length_14895_cov_38.8421 . mRNA 8034 11690 . + . ID=g11612.t1;Parent=g11612;Name=g11612.t1 NODE_1001_length_14895_cov_38.8421 . five_prime_UTR 8034 8459 . + . ID=g11612.t1.utr5p1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 8034 8570 . + . ID=g11612.t1.exon1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 8460 8570 . + 0 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 8874 9308 . + . ID=g11612.t1.exon2;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 8874 9308 . + 0 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 9516 9652 . + . ID=g11612.t1.exon3;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 9516 9652 . + 0 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 9980 10169 . + . ID=g11612.t1.exon4;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 9980 10169 . + 1 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 10317 10525 . + . ID=g11612.t1.exon5;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 10317 10525 . + 0 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 10742 10954 . + . ID=g11612.t1.exon6;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 10742 10954 . + 1 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . exon 11209 11690 . + . ID=g11612.t1.exon7;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . CDS 11209 11335 . + 1 ID=cds.g11612.t1;Parent=g11612.t1 NODE_1001_length_14895_cov_38.8421 . three_prime_UTR 11336 11690 . + . ID=g11612.t1.utr3p1;Parent=g11612.t1 #PROT g11612.t1 g11612 METYNVNREVKDSFYRYKMPKLLAKVEGKGNGIKTVLVNMVDVAKSLQRPPTYPTKYFGCELGAQTQFDDKNGRYIVNGSHEAVKLQQLLDGFIKKFVLCAQCKNPETNLRIDKHDNIWANCIACGHRGMLDMKHKLTTFILKNPPSPGIDHGTGKVKEAAAASEEPVAADSKKSKKSKKDKDAPVENGAAVETPVKTKSSKKDSKEADDDDDDDDDWSLDTSAEAVKARRIALEAELGEAGVRLANAQIAAQDAAKQETDKFIEKLKAVGQKRKAKEVQAEVAKLKIAEKVIPPLITEFYGKLHTPTAAEVEEAKDAAKAKGAKNVPTAASILYEQFQTITRESGRIINPLTTFSVVTARLTIGQFEKLFFAHPEIVARMPRVWHSLYDADVIDGDSMLQWADSPASGEFVEKAFTEKLKENSSSFIEWLRASDDSDSSSDDVPVTKRTLITASKAAPVAASHVDDINIDDI* # ORIGINAL: g11611.t1 original gene structure, not modified by PASA NODE_1001_length_14895_cov_38.8421 AUGUSTUS gene 4666 7055 . - . ID=g11611;Name=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS mRNA 4666 7055 . - . ID=g11611.t1;Parent=g11611;Name=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 6924 7055 . - . ID=g11611.t1.exon1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 6924 7055 . - 0 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 6676 6786 . - . ID=g11611.t1.exon2;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 6676 6786 . - 0 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 6435 6537 . - . ID=g11611.t1.exon3;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 6435 6537 . - 0 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 5939 6142 . - . ID=g11611.t1.exon4;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 5939 6142 . - 2 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 5679 5750 . - . ID=g11611.t1.exon5;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 5679 5750 . - 2 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 5225 5424 . - . ID=g11611.t1.exon6;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 5225 5424 . - 2 ID=cds.g11611.t1;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 4666 4905 . - . ID=g11611.t1.exon7;Parent=g11611.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 4666 4905 . - 0 ID=cds.g11611.t1;Parent=g11611.t1 #PROT g11611.t1 g11611 MKAQTVVWGVASSQAPVSQLKLESSLIEAASYLRKNDVVAFPTETVYGLGANAYSDDAALKVFAAKGRPSDNPLIVHISNEAQLAELVGTIIPPSARTLMDTFWPGPLTVVLPVVGPVSRYVTAGLSSVGVRMPDHPVALALIELAGVPIAAPSANTSGRPSPTCAQHVMEDLGGKIVGIVDGGETGVGLESTVVDCTGDVPLILRPGGITREQIEETVGRVAVDVSVTTQESKPKAPGMKYAHYAPRAPLVVSHGSREFTLRHVQSLLAEGKKVAVLTTSENASFYGPGISVVTCGTRSDLPSVARSLYDALRSFDSMDVDAIVSESFQTDGIGAAIMNRLNKAAGHNSVRE* # PASA_UPDATE: g11609.t1, single gene model update, valid-1, status:[pasa:asmbl_3,status:12],[pasa:asmbl_4,status:12],[pasa:asmbl_6,status:12], valid-1 NODE_1001_length_14895_cov_38.8421 . gene 313 1968 . + . ID=g11609;Name=g11609.t1 NODE_1001_length_14895_cov_38.8421 . mRNA 313 1968 . + . ID=g11609.t1;Parent=g11609;Name=g11609.t1 NODE_1001_length_14895_cov_38.8421 . exon 313 436 . + . ID=g11609.t1.exon1;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . CDS 313 436 . + 0 ID=cds.g11609.t1;Parent=g11609.t1;5_prime_partial=true NODE_1001_length_14895_cov_38.8421 . exon 698 854 . + . ID=g11609.t1.exon2;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . CDS 698 854 . + 2 ID=cds.g11609.t1;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . exon 1093 1278 . + . ID=g11609.t1.exon3;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . CDS 1093 1278 . + 1 ID=cds.g11609.t1;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . exon 1545 1968 . + . ID=g11609.t1.exon4;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . CDS 1545 1743 . + 1 ID=cds.g11609.t1;Parent=g11609.t1 NODE_1001_length_14895_cov_38.8421 . three_prime_UTR 1744 1968 . + . ID=g11609.t1.utr3p1;Parent=g11609.t1 #PROT g11609.t1 g11609 FDKKKQEHKIFIYEADGKPKGEASLTYEDPMAASAAIEWFHDKDFHGQTISVTFADVKVYVPPPRGSGGGGRGGYGGGGGGGAREGDWVCPSPGCGNSNFARRDTCNKCHTPKPGGGGGGGGGGYGDRDGGRGGYGGGGGGRPPPREGDWTCPNAGCGNSNFARRDSCFKCGTSKPGGGGGGGGGYGDRGGGGGGDRDRDYGRRDRDRYSDDRNDRRERQY* # ORIGINAL: g11613.t1 original gene structure, not modified by PASA NODE_1001_length_14895_cov_38.8421 AUGUSTUS gene 12100 14723 . - . ID=g11613;Name=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS mRNA 12100 14723 . - . ID=g11613.t1;Parent=g11613;Name=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 14673 14723 . - . ID=g11613.t1.exon1;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 14673 14723 . - 0 ID=cds.g11613.t1;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 14379 14417 . - . ID=g11613.t1.exon2;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 14379 14417 . - 0 ID=cds.g11613.t1;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 14007 14080 . - . ID=g11613.t1.exon3;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 14007 14080 . - 0 ID=cds.g11613.t1;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 13440 13501 . - . ID=g11613.t1.exon4;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 13440 13501 . - 1 ID=cds.g11613.t1;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS exon 12100 12953 . - . ID=g11613.t1.exon5;Parent=g11613.t1 NODE_1001_length_14895_cov_38.8421 AUGUSTUS CDS 12100 12953 . - 2 ID=cds.g11613.t1;Parent=g11613.t1 #PROT g11613.t1 g11613 MAYLHGATPPILHLDLKSPNLLVNDVMHVKVADFGLAQLKQTDKLYMGQTGTILWMAPELIRDEPCTEKADVFSFGIILWEILARKLPHSSTTFTRQELLDRLSYKRLRPAVPRWCPLPYSRLVCDCWEEDYPRRPSFAKVLSRIAEMDVKGWVDPTSRRMPTKLQPQSTSLDDDHSTGRGGSSSSLPISMVSNTYNSAANSTNSSNMNGKSEERLVPFDKGHVSAVDRLRREAGIPSGGGGVGLDAQSISRVGSSDSLELVDLARDNNPPLAEAIAAGSSRIMLVDPPARPGNQQRIAGLSPSPSSDLRVGAFARTPLSAAPALAHLGLHGATHGSAGSLNGTPKSEHKGGDGFRPNV* # PASA_UPDATE: g3565.t1, single gene model update, valid-1, status:[pasa:asmbl_4430,status:12], valid-1 NODE_2494_length_6072_cov_38.7392 . gene 779 5934 . - . ID=g3565;Name=g3565.t1 NODE_2494_length_6072_cov_38.7392 . mRNA 779 5934 . - . ID=g3565.t1;Parent=g3565;Name=g3565.t1 NODE_2494_length_6072_cov_38.7392 . five_prime_UTR 5934 5934 . - . ID=g3565.t1.utr5p1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 5685 5934 . - . ID=g3565.t1.exon1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 5685 5933 . - 0 ID=cds.g3565.t1;Parent=g3565.t1;5_prime_partial=true NODE_2494_length_6072_cov_38.7392 . exon 5042 5533 . - . ID=g3565.t1.exon2;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 5042 5533 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 4773 4811 . - . ID=g3565.t1.exon3;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 4773 4811 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 4382 4548 . - . ID=g3565.t1.exon4;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 4382 4548 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 4046 4181 . - . ID=g3565.t1.exon5;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 4046 4181 . - 1 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 3688 3817 . - . ID=g3565.t1.exon6;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 3688 3817 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 3288 3463 . - . ID=g3565.t1.exon7;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 3288 3463 . - 2 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 3019 3171 . - . ID=g3565.t1.exon8;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 3019 3171 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 2755 2865 . - . ID=g3565.t1.exon9;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 2755 2865 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 2497 2580 . - . ID=g3565.t1.exon10;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 2497 2580 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 2109 2355 . - . ID=g3565.t1.exon11;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 2109 2355 . - 0 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 1697 1831 . - . ID=g3565.t1.exon12;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 1697 1831 . - 2 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . exon 779 1525 . - . ID=g3565.t1.exon13;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . CDS 1149 1525 . - 2 ID=cds.g3565.t1;Parent=g3565.t1 NODE_2494_length_6072_cov_38.7392 . three_prime_UTR 779 1148 . - . ID=g3565.t1.utr3p1;Parent=g3565.t1 #PROT g3565.t1 g3565 VPLKVIEAGNNRDGLAKALYSRLFDWIVARVNKCFPFSNSSAYIGVLDIAGFEFFQTNSFEQFCINFCNEKLQQYFNEKVLKQEQELYQRESIKYKEISFVDNQDVIDLISGKGGIMTVLDEEAKLPTANDKHFSTSVHEKHGKHFRLMQPRKSKLPNQRKMNDDEGFIVRHYAGAVCYTVDGFLDKNNDALHHDLHMLMQESKDPFIALLFEKDEDVGPEEDAKAAAGGGTKRAKLHFASVGSKFREQLNVLMEKLQTTRANFIRCVKPNLKMQPQIFMGTEILSQLQCAGMVEVLELLQGGFPSRTSFNELYEMYKKYLPAKLQRLDPRTFCEALFRALGMSLEKYQFGTSRVFFKSGQFAEFDKMTTSDPENLAKLVESVMKWLIRKRWRKFIYGAITVEKLSRKIKYRQDAAKNCQRVIRGFLARRKYRPRVKALKRAAVGLREVQKLEAITATLAKDKDQMVAEAARLKKAFEGIKANAKAEDPKKSVAALDEAEKSLTKFVADMRQKKAESDELRRLQEEMERERKRKEEAEAREKALEEERKAKAAMEAERRKAEEEHRKRTEEDAKNQKLKDEQDRRSHEEVARRAQDDQDRRDTELAARLAEDEGKGGAVRQEAAAAEAKRQQELNDKKPKGKHDLSKWKYGELRDAINTSTDAELLEACREEFHRRLKVYHAWKTQHANKSGAEEAERAPLSVLESAPSAAVPAPPPRTVSKPDARPQRYFKIPFLRPQDANTEQGRKTLKRGYWYSHFDGQWIARQLEVHPDRPPVLLVAGKDDMEMCELSLEETGLTRKKGAEITQPEFDDDWVKAGGAPYNPAWSKKN* # PASA_UPDATE: g3564.t1, single gene model update, valid-1, status:[pasa:asmbl_4431,status:12], valid-1 NODE_2494_length_6072_cov_38.7392 . gene 181 746 . + . ID=g3564;Name=g3564.t1 NODE_2494_length_6072_cov_38.7392 . mRNA 181 746 . + . ID=g3564.t1;Parent=g3564;Name=g3564.t1 NODE_2494_length_6072_cov_38.7392 . exon 181 746 . + . ID=g3564.t1.exon1;Parent=g3564.t1 NODE_2494_length_6072_cov_38.7392 . CDS 181 552 . + 0 ID=cds.g3564.t1;Parent=g3564.t1 NODE_2494_length_6072_cov_38.7392 . three_prime_UTR 553 746 . + . ID=g3564.t1.utr3p1;Parent=g3564.t1 #PROT g3564.t1 g3564 MLKNPRILIYDEATSNLDSITESNILKSLSVLTERRTALFIAHRLATVRDAHEIVVLDDGRVAERGTHDELIARAGLYAHMWQRQQYHDGSSAPATPTASPASPTQGVSVVAKGVDAGRKHGA* # PASA_UPDATE: g12730.t1, single gene model update, valid-1, status:[pasa:asmbl_6887,status:12], valid-1 NODE_4033_length_2309_cov_28.3375 . gene 52 2099 . + . ID=g12730;Name=g12730.t1 NODE_4033_length_2309_cov_28.3375 . mRNA 52 2099 . + . ID=g12730.t1;Parent=g12730;Name=g12730.t1 NODE_4033_length_2309_cov_28.3375 . exon 52 456 . + . ID=g12730.t1.exon1;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . CDS 52 456 . + 0 ID=cds.g12730.t1;Parent=g12730.t1;5_prime_partial=true NODE_4033_length_2309_cov_28.3375 . exon 662 822 . + . ID=g12730.t1.exon2;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . CDS 662 822 . + 0 ID=cds.g12730.t1;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . exon 1072 1252 . + . ID=g12730.t1.exon3;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . CDS 1072 1252 . + 1 ID=cds.g12730.t1;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . exon 1686 1783 . + . ID=g12730.t1.exon4;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . CDS 1686 1783 . + 0 ID=cds.g12730.t1;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . exon 2004 2099 . + . ID=g12730.t1.exon5;Parent=g12730.t1 NODE_4033_length_2309_cov_28.3375 . CDS 2004 2099 . + 1 ID=cds.g12730.t1;Parent=g12730.t1;3_prime_partial=true #PROT g12730.t1 g12730 VGVHIADVTHFVKPATAIDAEAADRGTTVYLTEKRIDMLPELLGTNLCSLMGNVERFAFSVIWEMTPDANIVSMRFTKSVICSRASMTYEEAQMRIDDTSRTDSVTQGLRRLNSVAKILRSRRIEKGSLTLSSPEVRFELDAETHNPTDVTSKAMRETNSMVEEFMLLANVTVAAEIFRHYPQCSVLRRHPSPQQTSFDPLIRAASHKGITIATNDAKSLAVSLDAAEVPGEPYFNTLLRMMATRSMMQAVYFCSGRLSERDFLHYGLACPIYTHFTSPIRRYADVMVHRLLAASLGVEPLPAQLLETNAVQR # ORIGINAL: g7750.t1 original gene structure, not modified by PASA NODE_2171_length_7426_cov_61.6459 AUGUSTUS gene 1294 2292 . - . ID=g7750;Name=g7750.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS mRNA 1294 2292 . - . ID=g7750.t1;Parent=g7750;Name=g7750.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS exon 1294 2292 . - . ID=g7750.t1.exon1;Parent=g7750.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS CDS 1294 2292 . - 0 ID=cds.g7750.t1;Parent=g7750.t1 #PROT g7750.t1 g7750 MSATNTATATAAALKVFRTAYDLYADELNESIVKEFPDKKAHELNAVKRTRWAALSKEEQEEYKTRNQDRKKAATAAAPATAPAAPAVIAAPAVAPAPVVAAPAAAPAVVAAAAPAVAAPASGIPAAPKRPLAPYFRFQSDVRKSFVESNPTIPPKDVMKALGEKWNAMTEEEKKPYTVAYHEDKEKHDADLAEYRRLYPDAPKATRKPSKKAVEKAAAAAAAAAALAAAVAVAVAAAPVAPAKVKKPKVKKEKDPNAPKRPLTMYFRFLEDKRAEVRNSLTEGDKLNDKLKEMWAGLSEAEKAEYKAQTDAEMAEYKTELAEYNKTRTVTA* # ORIGINAL: g7749.t1 original gene structure, not modified by PASA NODE_2171_length_7426_cov_61.6459 AUGUSTUS gene 1 753 . - . ID=g7749;Name=g7749.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS mRNA 1 753 . - . ID=g7749.t1;Parent=g7749;Name=g7749.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS exon 316 753 . - . ID=g7749.t1.exon1;Parent=g7749.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS CDS 316 753 . - 0 ID=cds.g7749.t1;Parent=g7749.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS exon 1 147 . - . ID=g7749.t1.exon2;Parent=g7749.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS CDS 1 147 . - 0 ID=cds.g7749.t1;Parent=g7749.t1 #PROT g7749.t1 g7749 MGTKYSRAVERSPPQVLRYSAAKGKIQPLDMIFFCGQGFVASGILTVELASFGAADWSHVGVVVNTDILPTIKNGQPGRLYVWESTMSGILTDGVPNVETGKPFFGVQLRDLETVVNAYLSSGKTKIGWGRLKCNPCEMGATSYDETVGIYSRELNPERMAPQEFLISSGFAETAVVEEPTVLLRDNVSPIPPPR # ORIGINAL: g7751.t1 original gene structure, not modified by PASA NODE_2171_length_7426_cov_61.6459 AUGUSTUS gene 3653 5621 . + . ID=g7751;Name=g7751.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS mRNA 3653 5621 . + . ID=g7751.t1;Parent=g7751;Name=g7751.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS exon 3653 4386 . + . ID=g7751.t1.exon1;Parent=g7751.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS CDS 3653 4386 . + 0 ID=cds.g7751.t1;Parent=g7751.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS exon 5537 5621 . + . ID=g7751.t1.exon2;Parent=g7751.t1 NODE_2171_length_7426_cov_61.6459 AUGUSTUS CDS 5537 5621 . + 1 ID=cds.g7751.t1;Parent=g7751.t1 #PROT g7751.t1 g7751 MRAQTKTAAGLIPWVRSGDNAWHLLVQVSYSAALHDYKVDPLRGTAEPGEALWDVAVREAFEESAGVLDLRGANHHDLENTGALINKTHKFLGTVYHVCIDAHAVPGLVADYDANKAFIKRVGTVDELSFQQVDECVGLMWISQSEARTGHIRLNEKTSLRVSAQTKQIVKAHPDDFSSMVRIERNVSPSGLYTHVTVMNTKWHDVYDVYDAFNLFDVFNDCRHSAMPQTIEVDSPQLWKARQTQLGGMSTSTRTPAEPKPINKTPGGTLVA* # PASA_UPDATE: g2346.t1, single gene model update, valid-1, status:[pasa:asmbl_6663,status:12], valid-1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . gene 636 2376 . - . ID=g2346;Name=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . mRNA 636 2376 . - . ID=g2346.t1;Parent=g2346;Name=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . exon 2238 2376 . - . ID=g2346.t1.exon1;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . CDS 2238 2376 . - 0 ID=cds.g2346.t1;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . exon 2012 2101 . - . ID=g2346.t1.exon2;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . CDS 2012 2101 . - 2 ID=cds.g2346.t1;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . exon 1346 1863 . - . ID=g2346.t1.exon3;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . CDS 1346 1863 . - 2 ID=cds.g2346.t1;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . exon 636 1162 . - . ID=g2346.t1.exon4;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . CDS 1034 1162 . - 0 ID=cds.g2346.t1;Parent=g2346.t1 NODE_3872_length_2587_cov_58.1517_potentialcontaminant . three_prime_UTR 636 1033 . - . ID=g2346.t1.utr3p1;Parent=g2346.t1 #PROT g2346.t1 g2346 MDSDSENKDPGRRTVARETSSATDRQVLGDRPLTENALVTSDTAVKENKHLANALRSLVPVLLPTCHELFNGLKQDVTDEVAALLETLTAKLTMAITSEVNRSLDTKLADLKTELNGTLDMKLADLETKLDMKLADLETKLDTKFADLEAKLNTKLAELNTELNGTLDMKLADLETELGTKFADLETALDTKLADLKTELNRTLDTKLADLKTKLNREVAVLLRVSRAWGAFRDGDHASGATCTLPGKSIEGGIDYSRFVDDEEEKERCALAAQLGQEAAVGTLPDLHHDS* # PASA_UPDATE: g6081.t1, single gene model update, valid-1, status:[pasa:asmbl_5181,status:3], valid-1 NODE_2883_length_4850_cov_37.026 . gene 1618 4241 . - . ID=g6081;Name=g6081.t1 NODE_2883_length_4850_cov_37.026 . mRNA 1618 4241 . - . ID=g6081.t1;Parent=g6081;Name=g6081.t1 NODE_2883_length_4850_cov_37.026 . five_prime_UTR 4209 4241 . - . ID=g6081.t1.utr5p1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 4055 4241 . - . ID=g6081.t1.exon1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 4055 4208 . - 0 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 3738 3836 . - . ID=g6081.t1.exon2;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 3738 3836 . - 2 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 3457 3582 . - . ID=g6081.t1.exon3;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 3457 3582 . - 2 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 2894 3163 . - . ID=g6081.t1.exon4;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 2894 3163 . - 2 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 2414 2595 . - . ID=g6081.t1.exon5;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 2414 2595 . - 2 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 2122 2278 . - . ID=g6081.t1.exon6;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 2122 2278 . - 0 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . exon 1618 1870 . - . ID=g6081.t1.exon7;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . CDS 1818 1870 . - 2 ID=cds.g6081.t1;Parent=g6081.t1 NODE_2883_length_4850_cov_37.026 . three_prime_UTR 1618 1817 . - . ID=g6081.t1.utr3p1;Parent=g6081.t1 #PROT g6081.t1 g6081 MLSIVAVACGLKSASSGPVFTRLLRRPSAAVFHFQPYPTATKGLGICGAAIAFASFNSSAKCDPLKMADDGRRALHWVFKIGNLKTNLQFLEGVLGMHVLRHEEFNQGCEATCNGPYARPWSKTMIGYGPESHHFVLELTYNYGIRTYKRGNDLRYIAVEGENLVSKAAAAGLAVESTAEGSFVRSPDGYSFRIKDAPQSAITQVSIAVGDLAAATDYYSKVLLMKTYSTGERSVVLGYADNQAKLELVQSDVPVDHAAAFGRIAFAINDIHPVHKAVVAAGDKIQTEPVRLDTPGKPTVEVVILADRDGYEICFVGEEGFAALSTTKPGDDAIDWAMRTDNGADR* # PASA_UPDATE: g6080.t1, single gene model update, valid-1, status:[pasa:asmbl_5180,status:12], valid-1 NODE_2883_length_4850_cov_37.026 . gene 171 1573 . + . ID=g6080;Name=g6080.t1 NODE_2883_length_4850_cov_37.026 . mRNA 171 1573 . + . ID=g6080.t1;Parent=g6080;Name=g6080.t1 NODE_2883_length_4850_cov_37.026 . five_prime_UTR 171 190 . + . ID=g6080.t1.utr5p1;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . exon 171 334 . + . ID=g6080.t1.exon1;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . CDS 191 334 . + 0 ID=cds.g6080.t1;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . exon 571 923 . + . ID=g6080.t1.exon2;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . CDS 571 923 . + 0 ID=cds.g6080.t1;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . exon 1112 1573 . + . ID=g6080.t1.exon3;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . CDS 1112 1352 . + 1 ID=cds.g6080.t1;Parent=g6080.t1 NODE_2883_length_4850_cov_37.026 . three_prime_UTR 1353 1573 . + . ID=g6080.t1.utr3p1;Parent=g6080.t1 #PROT g6080.t1 g6080 MAKIPLPFGTDRMREIVLRLAAIAKKRDSVMIRMYLSVGAGGFGISPAESTGSIFYAVAHDLFVDKKKLAASGVPEATVTADEVPLKPPMLARMKSTNYLLNALVCARAAEKGGSFGIQVDERGFVGESCVMNAAFVGKDGVFRHPKFDGILTGITVTSLIRLADRLVKEGILKAVSIEDIHIDSARESAEIILFGGASCLPVTSLDGHVIGSGTPGPVARAFQALLTEQEAHGEGEVIDVPYDD* # ORIGINAL: g5132.t1 original gene structure, not modified by PASA NODE_4115_length_2172_cov_59.5012 AUGUSTUS gene 43 1362 . - . ID=g5132;Name=g5132.t1 NODE_4115_length_2172_cov_59.5012 AUGUSTUS mRNA 43 1362 . - . ID=g5132.t1;Parent=g5132;Name=g5132.t1 NODE_4115_length_2172_cov_59.5012 AUGUSTUS exon 43 1362 . - . ID=g5132.t1.exon1;Parent=g5132.t1 NODE_4115_length_2172_cov_59.5012 AUGUSTUS CDS 43 1362 . - 0 ID=cds.g5132.t1;Parent=g5132.t1 #PROT g5132.t1 g5132 MTCLNRNATDPDLCWDAVICRPLIITPIVLPAMYLHRPIPSWSNGTRLSVGIHADYDDHAGMCILQHHISGRGLELTAFARATLWTKECEADVDKWSTRERDRLLTESQFAVSGRPVAPTPWASAIIAGSESLPNAGVIMDLLADILPETQHAGEVCNEHYHDDKIGNTHAMEMACARADCDRLTKQLPMPLQTPSRSGGGAVAMGADSHHCHVRAASAAVPYSDSKDSTLSDSTSGSFPSPAMWPRDPSDDDCTIAFQAPEGCGSQYSREEAKPTSGISPVNKSLPVHLSPSCAAVPVGARLIGKRPLSIGSGPQAGGRHTASSAVLQVAGDWLHRGSHSSAHVWPHVTTNSSPRGTALSMARLRKQASVTWQAHKANSGICKKRSSWSWNAFEPTHGGGKAAHRRQLKPGSSVGTDSCDDLQQELAHSTLANRHARA* # ORIGINAL: g703.t1 original gene structure, not modified by PASA NODE_3056_length_4433_cov_33.0808 AUGUSTUS gene 183 2796 . + . ID=g703;Name=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS mRNA 183 2796 . + . ID=g703.t1;Parent=g703;Name=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 183 316 . + . ID=g703.t1.exon1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 183 316 . + 0 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 674 769 . + . ID=g703.t1.exon2;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 674 769 . + 1 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 1092 1275 . + . ID=g703.t1.exon3;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 1092 1275 . + 1 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 1583 1682 . + . ID=g703.t1.exon4;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 1583 1682 . + 0 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 1865 1965 . + . ID=g703.t1.exon5;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 1865 1965 . + 2 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 2207 2350 . + . ID=g703.t1.exon6;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 2207 2350 . + 0 ID=cds.g703.t1;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS exon 2587 2796 . + . ID=g703.t1.exon7;Parent=g703.t1 NODE_3056_length_4433_cov_33.0808 AUGUSTUS CDS 2587 2796 . + 0 ID=cds.g703.t1;Parent=g703.t1 #PROT g703.t1 g703 FEGVPTHPDASRFWKVCDKYKVTHFYTAPTAIRSLMKFGDSFVNKCNLDSLSVLGSVGEPINPAAWEWYFNVVGKGKCPVVDTWWQTETGGHMLTPLPAAIPAKPSSATFPFFGVVPAIVDEKGVELSGPCKGTLVIKSSWPGQMRTVFGDHARFQKTYFSQYPGYYFTGDGCYRDEQGYYFITGRCDDVLNVSGHRIGTAELEKALNSHHSVVESAVVGYPHDVKGEGIYAFVTLADGATMSDKLIQELKTQVRHKIGAFAAPDLIQDAAALPKTRSGKIMRRILRKIAHNQLDELGDTSTLADPTVVDKLVAGRIVPPSS* # PASA_UPDATE: g704.t1, single gene model update, valid-1, status:[pasa:asmbl_5492,status:12], valid-1 NODE_3056_length_4433_cov_33.0808 . gene 3160 4433 . - . ID=g704;Name=g704.t1 NODE_3056_length_4433_cov_33.0808 . mRNA 3160 4433 . - . ID=g704.t1;Parent=g704;Name=g704.t1 NODE_3056_length_4433_cov_33.0808 . exon 4230 4433 . - . ID=g704.t1.exon1;Parent=g704.t1 NODE_3056_length_4433_cov_33.0808 . CDS 4230 4433 . - 0 ID=cds.g704.t1;Parent=g704.t1;5_prime_partial=true NODE_3056_length_4433_cov_33.0808 . exon 3880 3946 . - . ID=g704.t1.exon2;Parent=g704.t1 NODE_3056_length_4433_cov_33.0808 . CDS 3880 3946 . - 0 ID=cds.g704.t1;Parent=g704.t1 NODE_3056_length_4433_cov_33.0808 . exon 3160 3633 . - . ID=g704.t1.exon3;Parent=g704.t1 NODE_3056_length_4433_cov_33.0808 . CDS 3299 3633 . - 2 ID=cds.g704.t1;Parent=g704.t1 NODE_3056_length_4433_cov_33.0808 . three_prime_UTR 3160 3298 . - . ID=g704.t1.utr3p1;Parent=g704.t1 #PROT g704.t1 g704 SLPLPSLPLPSPLTLLCSQEIIKDVIVSDKEWSAVLLRYFNPIGAHKSGTIGEDPKGLPNNLMPYVAQVAVGRLPELSVFGNDYDTKDGTGVRDYIHVVDLAQGHVAALAKFEAAPTGCLVYNLGTGTGYSVLEMVAAMEKVSGKTIAYKIVPRRPGDVASVYADPVKASTELGWTAKRGLDEMCEDLWRWQQGNPNGFAK* # ORIGINAL: g11067.t1 original gene structure, not modified by PASA NODE_2511_length_6041_cov_40.5975 AUGUSTUS gene 1001 3683 . - . ID=g11067;Name=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS mRNA 1001 3683 . - . ID=g11067.t1;Parent=g11067;Name=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 3604 3683 . - . ID=g11067.t1.exon1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 3604 3683 . - 0 ID=cds.g11067.t1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 2997 3072 . - . ID=g11067.t1.exon2;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 2997 3072 . - 1 ID=cds.g11067.t1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 2247 2818 . - . ID=g11067.t1.exon3;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 2247 2818 . - 0 ID=cds.g11067.t1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 1561 2066 . - . ID=g11067.t1.exon4;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 1561 2066 . - 1 ID=cds.g11067.t1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 1340 1431 . - . ID=g11067.t1.exon5;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 1340 1431 . - 2 ID=cds.g11067.t1;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 1001 1099 . - . ID=g11067.t1.exon6;Parent=g11067.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 1001 1099 . - 0 ID=cds.g11067.t1;Parent=g11067.t1 #PROT g11067.t1 g11067 MDGPTVSRVCIPQARVYEPEKGEVGGTRYQEFYDLYNQLKKKMTPCPFPGKKAMGNRKPQFVEQRRLGLERFLQHAVSELGVVSKAPILCTFLSVPADAAPTQDASHTDIGGSSLSLGSVSGVAATAHTSSQPGSTADGARFEREPSLEKALKYHRSTIIRVPPPPLHKKPSLFDRRRRRSASRDGSTTGHGQGGLDGTGRKQSQLVVGSHVYDHGAGGYFYNNSVSSPGLTSVFTEFSVGSSNSCESGSQSAPPKAETAFFVDVDIFSPEVSMALSGETGVTDGAESDEQMRRRRSAVLPAEVRKAILSGVPIHCSDTHVTAVAARLSKVVVSSEILSSVQEDSSETKHGAELAAVDGSVGSLLHAIVMENKDVDAVSSSVPGRTEVDTGVQKRPGVTVASVGESQDAAQELPDELPPSSLGDDVILLGVRRSLYGDEFASHTMAHIQRMDSTVSLSDSDDGSDPVTLGDDEV* # ORIGINAL: g11068.t1 original gene structure, not modified by PASA NODE_2511_length_6041_cov_40.5975 AUGUSTUS gene 4848 5309 . + . ID=g11068;Name=g11068.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS mRNA 4848 5309 . + . ID=g11068.t1;Parent=g11068;Name=g11068.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 4848 5309 . + . ID=g11068.t1.exon1;Parent=g11068.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 4848 5309 . + 0 ID=cds.g11068.t1;Parent=g11068.t1 #PROT g11068.t1 g11068 MHLTEEQAYLYFETFDILETNDPRVRIARCGNGPQSTRFAAVDTLRFVLYLYAQQYSRISLRARYLSGEEWPSGQPDEADGATAHGGPSLRSPNRDAKLEESHQLQFVRRNVLEMLTLLSEPPMEGSTLEETPIASSAVASISVLVRMSCLDV* # ORIGINAL: g11066.t1 original gene structure, not modified by PASA NODE_2511_length_6041_cov_40.5975 AUGUSTUS gene 139 539 . + . ID=g11066;Name=g11066.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS mRNA 139 539 . + . ID=g11066.t1;Parent=g11066;Name=g11066.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 139 217 . + . ID=g11066.t1.exon1;Parent=g11066.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 139 217 . + 1 ID=cds.g11066.t1;Parent=g11066.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS exon 516 539 . + . ID=g11066.t1.exon2;Parent=g11066.t1 NODE_2511_length_6041_cov_40.5975 AUGUSTUS CDS 516 539 . + 0 ID=cds.g11066.t1;Parent=g11066.t1 #PROT g11066.t1 g11066 YCMVFTETPNVSAVTWDSEGGQLTQMTQRDSKV* # ORIGINAL: g3002.t1 original gene structure, not modified by PASA NODE_10510_length_305_cov_112.835_potentialcontaminant AUGUSTUS gene 2 305 . + . ID=g3002;Name=g3002.t1 NODE_10510_length_305_cov_112.835_potentialcontaminant AUGUSTUS mRNA 2 305 . + . ID=g3002.t1;Parent=g3002;Name=g3002.t1 NODE_10510_length_305_cov_112.835_potentialcontaminant AUGUSTUS exon 2 305 . + . ID=g3002.t1.exon1;Parent=g3002.t1 NODE_10510_length_305_cov_112.835_potentialcontaminant AUGUSTUS CDS 2 305 . + 2 ID=cds.g3002.t1;Parent=g3002.t1 #PROT g3002.t1 g3002 CTYLVALHLDDSTAPNRTSLQHPLARTIRRTVLATKMRRHPHRRHPFLPLPPHHLPLPRTYLRLLLHPRTRRHRQCALPAPVTLHWMRNGTHLTLRHFSRT # ORIGINAL: g2684.t1 original gene structure, not modified by PASA NODE_4151_length_2108_cov_45.4678_potentialcontaminant AUGUSTUS gene 68 1905 . - . ID=g2684;Name=g2684.t1 NODE_4151_length_2108_cov_45.4678_potentialcontaminant AUGUSTUS mRNA 68 1905 . - . ID=g2684.t1;Parent=g2684;Name=g2684.t1 NODE_4151_length_2108_cov_45.4678_potentialcontaminant AUGUSTUS exon 68 1905 . - . ID=g2684.t1.exon1;Parent=g2684.t1 NODE_4151_length_2108_cov_45.4678_potentialcontaminant AUGUSTUS CDS 68 1905 . - 0 ID=cds.g2684.t1;Parent=g2684.t1 #PROT g2684.t1 g2684 MDAAASRGHFEIVKWLSENRSEGCRINALDMAAYCGYFEIVKWLSENRTEGCTTEAIDGAATCGHFEIVQWLSETRNKEGCTKRAMNMAASNGDLRLVMWLSEHRPEGCTTDAMDGAAANGHLAVVQWLNDHTNEGCTTDAMDKAATNGHLDIVQWLSVNRREGCTKCAIDGAASKGHLDVVIWLSASTEGCTKRAMNGAAEYGHFDVMIWLHDNRTEGCNECAMYKAAQNGHFNVVVWLTENKGWYALDTAAKYGHLRIVQWLPNRGCTIDAIDGAAANGHFEVVKWLCETHEDGPAEFMNAMNAAAANGHIEILKFLNRYSGCNTLTTSAMDCSATNGHLDVVVWLGENSTVGCTTAAMDGAAANGHLDVVVWLSKNSTVGCTTAMDGAATNGHLDVVVWLSKNSTVGCTTAAMDGAAANGHLNVVVWLKNNRTELTTAAIDKAAARGHLDVVMWLSKHGTAGCTTNAIDKAAANGHFGVVRWLSENRTEGCTANAIDKAAKNGHLHIVRWLGRSAINRSTTAAMDEAAAYGHLDVVKWLSTHSTESGCTTLAMDEAAANGHLTVVKWLHDNRSEGCTAKAMTWAAENDHFDTVRWLHANRKECSISDTM # ORIGINAL: g2025.t1 original gene structure, not modified by PASA NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS gene 17018 18451 . + . ID=g2025;Name=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS mRNA 17018 18451 . + . ID=g2025.t1;Parent=g2025;Name=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS exon 17018 17550 . + . ID=g2025.t1.exon1;Parent=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS CDS 17018 17550 . + 0 ID=cds.g2025.t1;Parent=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS exon 17662 17800 . + . ID=g2025.t1.exon2;Parent=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS CDS 17662 17800 . + 1 ID=cds.g2025.t1;Parent=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS exon 17981 18451 . + . ID=g2025.t1.exon3;Parent=g2025.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS CDS 17981 18451 . + 0 ID=cds.g2025.t1;Parent=g2025.t1 #PROT g2025.t1 g2025 MLFLEIVGSNQKNRKVQSRFQHSGDTVSRYFRMYLDAIVALAPRLIYMPNTDAVPTEISRNPKFAGCFDDCIGAIDGTHVALRAPSEQAAPYRNGKGVLSQNVLAMATLDLRFAYVMAGYEGSASDSTVLDKALETDFVVPDGKYVLGDAGYPVYKNVLPPYRGERYHLKEFGATENRPKTAKEYFNLRHSQLRNAVERIFGICKARFPIIAGATGNGYPLALQSKIVYAVCALHNFLRLIGCADDKFAHDFNIQFDEAEEAACIKEADMISRRAEREKRRAVAAAAAAKQAGAGTPAVAAATAAQAGPAQSVETQPADSGSNDSDDSEDDSDELAEYIYSATTSREKAEMIALRDVIADTLWNSYQAELLRRASGQMRR* # PASA_UPDATE: g2021.t1, single gene model update, valid-1, status:[pasa:asmbl_8384,status:3], valid-1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . gene 4647 6277 . + . ID=g2021;Name=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . mRNA 4647 6277 . + . ID=g2021.t1;Parent=g2021;Name=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . five_prime_UTR 4647 4853 . + . ID=g2021.t1.utr5p1;Parent=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 4647 5208 . + . ID=g2021.t1.exon1;Parent=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 4854 5208 . + 0 ID=cds.g2021.t1;Parent=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 5451 6277 . + . ID=g2021.t1.exon2;Parent=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 5451 6067 . + 2 ID=cds.g2021.t1;Parent=g2021.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . three_prime_UTR 6068 6277 . + . ID=g2021.t1.utr3p1;Parent=g2021.t1 #PROT g2021.t1 g2021 MERSPRQSSQSPLRTGGGSQYGVGSSSLSGSTQTIMLGNARTASPNTSTSNGARDRHGSKSPSSAFGFGPSPIAQRQTHQQITRENEHLVLTLHAALKRNEQLEEEVSQRQETIDSLTETVHIGIKKLLLYKNKSETMEREARRYKKKYEAWHAKAVALQADAASEDEAADFASKKELSSWLAHSRDPGAAVIELSSKIQALLAETDKLREEKKDVERANRRLQRRVEEVEEVASQMGERMRVEKASRETLEKVRRRTRELEDNLRSVAADKVKQQQNNRKARELKVWERLHKQWVPGHAQGPAPPGAAGGGALARADDDKFD* # ORIGINAL: g2024.t1 original gene structure, not modified by PASA NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS gene 16542 16781 . - . ID=g2024;Name=g2024.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS mRNA 16542 16781 . - . ID=g2024.t1;Parent=g2024;Name=g2024.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS exon 16542 16781 . - . ID=g2024.t1.exon1;Parent=g2024.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS CDS 16542 16781 . - 0 ID=cds.g2024.t1;Parent=g2024.t1 #PROT g2024.t1 g2024 MSSTSKCALAIQEGLQHKKLHKSAHTLLVLCRPCDVKAFRDLLLKAGTCAFQLLICITVAGAVSISPSAASEMNSGDTE* # PASA_UPDATE: g2026.t1, single gene model update, valid-1, status:[pasa:asmbl_8382,status:12], valid-1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . gene 18715 19270 . - . ID=g2026;Name=g2026.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . mRNA 18715 19270 . - . ID=g2026.t1;Parent=g2026;Name=g2026.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 18715 19270 . - . ID=g2026.t1.exon1;Parent=g2026.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 18770 19270 . - 0 ID=cds.g2026.t1;Parent=g2026.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . three_prime_UTR 18715 18769 . - . ID=g2026.t1.utr3p1;Parent=g2026.t1 #PROT g2026.t1 g2026 MLDGVVATGNAATSATQEAALMEADRSQVRTTTQLEDASDSAERPPTADASSVKDAAGNEQECPTSNRAYQPRKRQKVESGTSAELIASYLASLRERDEREATKAPKQAEQGVVRRAITLVQSSSLTDEEIVASMSILEDERRALVYCTLRDTLRDVWLRERMGKL* # ORIGINAL: g2023.t1 original gene structure, not modified by PASA NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS gene 12535 16038 . - . ID=g2023;Name=g2023.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS mRNA 12535 16038 . - . ID=g2023.t1;Parent=g2023;Name=g2023.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS exon 12535 16038 . - . ID=g2023.t1.exon1;Parent=g2023.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant AUGUSTUS CDS 12535 16038 . - 0 ID=cds.g2023.t1;Parent=g2023.t1 #PROT g2023.t1 g2023 MVSHAPSPITALYGRRGLAVAVGCVAILAILFISLQSPPQSRSLGAYVVTNRDQSQGDVGASVDDSGASTDGQRSATVSAAATPSNVKATQAAVTASPPPGTLGETTSMLPPPQCILLHATTFYGMHNYSALGPVPAAGMQLQGSKRGRTCLLTVNSREYSRNATVSIFHGPSFTSFPNFVMPEKLPGQKWIFSGGECPMSDVRAVNATFTSMMDFNWGYYIDAALSRPYGPPLVHWFSIPLRPVEQRDDEVPVAWLASNCGAFNRREEYIMELMKYIGVASYGKCMNNRPLFNVAAGHDMDRTYTTLSKHKFYLAFENGNCKNYITEKLSNALVAGLIPIVWGPNDRNEYLRWMPDFNSLIFAQDFAGPRELATFLHSINRDDGLFARYVAYRNVLPFPNALYGALPPGGERDVSQRLCDLCHDMMPGTPESDKEKWNPSTATLPDMSCTNNNMIAKLDSQDNTHGWRTIVADGINATSAAAVLIANASAAMTGGILERAVGQWFSDRPLNYPRVPLVSPITARAFGNVQRLSLDGPFDATKEAEHLLMFGDTTSTRPPSSRRVDVPRKWGEFSPAADLDGCGTDDEYAFAHLELLLRATHWPDMVAAARRGMLDWDRYHAEKMGGDSALASSLPCVALRSHFIGYVIDRSHFAAKMPYDRVFGDLDVPGLLRLAVLHVRFLRKSLSDASTSPDALMNSLLRAIGMSSLAHALPELNNASSLAGEMVTAFECVASDHLAGRAGLYLRSPFVHVLLLWRFQGLRRSGLATVGAGVTASFDGLTAASVQLFRPDGQLVRLCGSPSSTAAEFSGLHPHIEWLASRGTRGALPSFGDSMDPTSGYIVFRSPWVEILSGSSFYLYFNGMVDATSPSSNVDALHIDWFDRGRSWLTAGGSARDSSQSDSDMDNYYRSARAHNVVLFDVNEEFAAPVSPREAVSGRPGGRPCILSAEAVPVQLGGSTALIRVGEGRIVLHDAGTNHSRIIVSHPGEWLLIVDEVTSWLPVGLPAFSQSFHFAADVNVSRDASSGAVQSHVATAMVGASPARMRVLHAGSADGAAVTTRVSLHHGERTPAVEGWMEGKPAYVLRNGASVNGMSTTTVATLFEFLNATQPPTAGVNGVNIALSVSGRIASALAKDDLAVQWASEDGTQHAVRCAVVSGRRVWTIT* # PASA_UPDATE: g2020.t1, single gene model update, valid-1, status:[pasa:asmbl_8383,status:12], valid-1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . gene 103 4464 . + . ID=g2020;Name=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . mRNA 103 4464 . + . ID=g2020.t1;Parent=g2020;Name=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . five_prime_UTR 103 290 . + . ID=g2020.t1.utr5p1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 103 429 . + . ID=g2020.t1.exon1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 291 429 . + 0 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 534 761 . + . ID=g2020.t1.exon2;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 534 761 . + 2 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 855 1356 . + . ID=g2020.t1.exon3;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 855 1356 . + 2 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 1468 1591 . + . ID=g2020.t1.exon4;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 1468 1591 . + 1 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 1794 1902 . + . ID=g2020.t1.exon5;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 1794 1902 . + 0 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 2151 2347 . + . ID=g2020.t1.exon6;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 2151 2347 . + 2 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 2493 2676 . + . ID=g2020.t1.exon7;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 2493 2676 . + 0 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 2860 3039 . + . ID=g2020.t1.exon8;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 2860 3039 . + 2 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 3237 3514 . + . ID=g2020.t1.exon9;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 3237 3514 . + 2 ID=cds.g2020.t1;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 3640 4464 . + . ID=g2020.t1.exon10;Parent=g2020.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 3640 4464 . + 0 ID=cds.g2020.t1;Parent=g2020.t1 #PROT g2020.t1 g2020 MPRPFVVPLQRKDAPSDAGDDYDVANIGGKGASLSSLLDAGFNVPEGFCITAHAYKTHAMRTALLEDLSASSTNDPDALSAIAQTHFVGSVMPGDIESNIKDAYTALGDDAIVAVRSSATAEDLPGASFAGQHDTILGVEGVDALILAVQACWASLWSPRAISYRNSQRFDHAQVSMCVVVQRLVRARVAGVAFTVDPVDASASAVVVSATYGLGEGVVGGQLAADTFRLARGGQHAVISQEIQNKTRMYSLRDSANDHTDADASHGLCVLVDVDQALARIPCLSSEELRLLADIALKAEEHYTSPQDIEFAFEDDRLYLLQSRPVTVVQTVDGGVGAGDDGARMDTPVRKATDVYTKCNIGEMMPGAVTPLTQSTFGVWLEHGLRELAQRGDIDFEGERPRNALEYVGCFSGHLFLNLGAMYDMSKDIFGFKKENIDTSLCGRLVEGPIAPSPGPLLSRVKNLVGYMQFATHAWERTARLSLLLDLLRARFQEESDGSAAGLFRRIDGSLHYLDEAYRCHFASSSVSGLMNVALGVATFGSRHLSQAQNAEIAGLLTNIEGIDSADVVKDTDAIVALIARLSDSSRESFAKEMTAGQALGWLRGEHVTSCPAVTSAFSRFITRHGHRCVREAEMRELPWEDDPTPLVKLLQASALAHAHVSPHEGGAERARARTAAVEGRLPTLVRPLFRRVLAWAKEGVRLRERTKSLCIRLQSVLKRHYRELGALMVREGIIPDADCVFFLTHDELRDVLYPESPCARKPAVAREQMASFAARRRREYSSNCRLQFPDFSVGRPVPVSAARTLERAGITAGTKSMQGTPVSRGKVYGNARVVTSLSDAADLQAGEILVVPYTDVGWTPYFTLAAGLATEMGSLVSHGAVVAREYGLPCVVNLPGATSFFKTGDKIVLDADNGIISLDE* # PASA_UPDATE: g2022.t1, single gene model update, valid-1, status:[pasa:asmbl_8385,status:12],[pasa:asmbl_8386,status:12],[pasa:asmbl_8387,status:12], valid-1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . gene 7138 11399 . - . ID=g2022;Name=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . mRNA 7138 11399 . - . ID=g2022.t1;Parent=g2022;Name=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . five_prime_UTR 11173 11399 . - . ID=g2022.t1.utr5p1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 11132 11399 . - . ID=g2022.t1.exon1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 11132 11172 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 10772 10851 . - . ID=g2022.t1.exon2;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 10772 10851 . - 1 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 10453 10580 . - . ID=g2022.t1.exon3;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 10453 10580 . - 2 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 9922 10236 . - . ID=g2022.t1.exon4;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 9922 10236 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 9542 9739 . - . ID=g2022.t1.exon5;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 9542 9739 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 8809 9247 . - . ID=g2022.t1.exon6;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 8809 9247 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 8083 8537 . - . ID=g2022.t1.exon7;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 8083 8537 . - 2 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 7603 7782 . - . ID=g2022.t1.exon8;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 7603 7782 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . exon 7138 7302 . - . ID=g2022.t1.exon9;Parent=g2022.t1 NODE_596_length_20442_cov_41.8635_potentialcontaminant . CDS 7138 7302 . - 0 ID=cds.g2022.t1;Parent=g2022.t1 #PROT g2022.t1 g2022 MSNNQKRRWEADRMLHLYIYDYLQKRNFHNTASAFMAEAQVVEGSVPIDAPGGFLFEWWGVFWDIFSARVNKASSKEAQVYVEQQRRAAEQARTRPSVGASPQLPQVSPMMQQVPGPAGPPSVQTPQMGLGGQFAQQGQQTVATPQQQRMEFTHPSPNTVMAMHSNASKLASMGMLKKDDAAIDDPLQMGFVAQQQRRQSVQSIIQQQQSQQQQQQQQQQQQAQQQAQQQAVAQQSQQQQAQQQQAQQQQRNWAQPIPGNANQNLGGVPSAKRLKTEGPAFFPGNTSGMPQNALAALQAQAQQQQQPGMGGLSGDVGNASATLIAQIQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLLHHQHSLEAQGMGGSQGNVVAAVAAQQRIYRPNQQADEAAYQRQQVQHTLLMRKSAAAQMGQNPGAAAVAAAAVAAQQQQQQQQQQQQQQQQRFIQMQHQQQQLQQLHQQQQPQMGQGQQGQQGQQGQQGQQQGLQGQAQHLSGSHIPANIRMAAVQSVESKTALALQQQMQQQMQQRPMGNLGMDGKQSMAGNAASPGADGPGGPKGGKSGKNAPKQQRTPAKLKKQAQQGGDNDDGMRGGGEGKLGGQDDIYQNGNLYNYVFDPENGSFPDATLGQVDPNLLSSLGDEEDTMGFMNLDDLNEQ* # ORIGINAL: g2841.t1 original gene structure, not modified by PASA NODE_6493_length_560_cov_64.7361_potentialcontaminant AUGUSTUS gene 1 434 . - . ID=g2841;Name=g2841.t1 NODE_6493_length_560_cov_64.7361_potentialcontaminant AUGUSTUS mRNA 1 434 . - . ID=g2841.t1;Parent=g2841;Name=g2841.t1 NODE_6493_length_560_cov_64.7361_potentialcontaminant AUGUSTUS exon 1 434 . - . ID=g2841.t1.exon1;Parent=g2841.t1 NODE_6493_length_560_cov_64.7361_potentialcontaminant AUGUSTUS CDS 1 434 . - 0 ID=cds.g2841.t1;Parent=g2841.t1 #PROT g2841.t1 g2841 MQDIIDAPIGPPLQESVDNDLWNIHMHLGLGLDVKKSFNASTVGIARHSNSDVSFKGAVPHRSTNMNSHAVDDCRRPFTMRFIVNDGDDYANAFQPFCTSTLPIDFSDELQAPVDDNDSGLSADGADGEARPSPSHSDSSLWDW # PASA_UPDATE: g1057.t1, single gene model update, valid-1, status:[pasa:asmbl_1836,status:12], valid-1 NODE_1517_length_10787_cov_42.4038 . gene 9014 10538 . + . ID=g1057;Name=g1057.t1 NODE_1517_length_10787_cov_42.4038 . mRNA 9014 10538 . + . ID=g1057.t1;Parent=g1057;Name=g1057.t1 NODE_1517_length_10787_cov_42.4038 . five_prime_UTR 9014 9340 . + . ID=g1057.t1.utr5p1;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . exon 9014 9407 . + . ID=g1057.t1.exon1;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . CDS 9341 9407 . + 0 ID=cds.g1057.t1;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . exon 9608 9682 . + . ID=g1057.t1.exon2;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . CDS 9608 9682 . + 2 ID=cds.g1057.t1;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . exon 9963 10064 . + . ID=g1057.t1.exon3;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . CDS 9963 10064 . + 2 ID=cds.g1057.t1;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . exon 10451 10538 . + . ID=g1057.t1.exon4;Parent=g1057.t1 NODE_1517_length_10787_cov_42.4038 . CDS 10451 10538 . + 2 ID=cds.g1057.t1;Parent=g1057.t1;3_prime_partial=true #PROT g1057.t1 g1057 MNLGAAFAQRNGLLYFGFNQDQGCFSVGLDNGFRIYNCDPLKEKTRRDFDDGGIRIVEMLFRCNYLALVGGGKTPKYPPNKVMIWDDVKRKCVIEVEFRSEVKAVKLRRD # PASA_UPDATE: g1056.t1, single gene model update, valid-1, status:[pasa:asmbl_1835,status:3], valid-1 NODE_1517_length_10787_cov_42.4038 . gene 6067 8150 . - . ID=g1056;Name=g1056.t1 NODE_1517_length_10787_cov_42.4038 . mRNA 6067 8150 . - . ID=g1056.t1;Parent=g1056;Name=g1056.t1 NODE_1517_length_10787_cov_42.4038 . five_prime_UTR 7904 8150 . - . ID=g1056.t1.utr5p1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . exon 7779 8150 . - . ID=g1056.t1.exon1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . CDS 7779 7903 . - 0 ID=cds.g1056.t1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . exon 7396 7620 . - . ID=g1056.t1.exon2;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . CDS 7396 7620 . - 1 ID=cds.g1056.t1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . exon 6938 7131 . - . ID=g1056.t1.exon3;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . CDS 6938 7131 . - 1 ID=cds.g1056.t1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . exon 6638 6798 . - . ID=g1056.t1.exon4;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . CDS 6638 6798 . - 2 ID=cds.g1056.t1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . exon 6067 6428 . - . ID=g1056.t1.exon5;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . CDS 6300 6428 . - 0 ID=cds.g1056.t1;Parent=g1056.t1 NODE_1517_length_10787_cov_42.4038 . three_prime_UTR 6067 6299 . - . ID=g1056.t1.utr3p1;Parent=g1056.t1 #PROT g1056.t1 g1056 MASRDLDAAREAYAAGDIQLSVVAHDSAADASANNSEALHMASGKYIKSVVYGGLDGIITTFSVVAAVAGSDMSTGVVIVMGFANLIADGISMGFGDFLSSQAEYEFSIKERTREVWELENNADGERREMVEIYISKGVEKEDAETVIGIMSKYKDFFVDHMLVTELGLMPPDADDSPAKNGLVTFVAFLIFGLVPLIAYIGFHELRNEVENFNIAFFMSCMLTGITLFLLGAVKSKFSTQKWWISGMWVLFNGALAAASAYLVGWGLNQFADVNDC* # ORIGINAL: g1053.t1 original gene structure, not modified by PASA NODE_1517_length_10787_cov_42.4038 AUGUSTUS gene 99 229 . + . ID=g1053;Name=g1053.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS mRNA 99 229 . + . ID=g1053.t1;Parent=g1053;Name=g1053.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS exon 99 229 . + . ID=g1053.t1.exon1;Parent=g1053.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS CDS 99 229 . + 2 ID=cds.g1053.t1;Parent=g1053.t1 #PROT g1053.t1 g1053 SKDNTGGVQCVWRRVRFACPRDHTCQRGRCCGNATRHRRCRFL # ORIGINAL: g1054.t1 original gene structure, not modified by PASA NODE_1517_length_10787_cov_42.4038 AUGUSTUS gene 553 2137 . - . ID=g1054;Name=g1054.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS mRNA 553 2137 . - . ID=g1054.t1;Parent=g1054;Name=g1054.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS exon 1311 2137 . - . ID=g1054.t1.exon1;Parent=g1054.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS CDS 1311 2137 . - 0 ID=cds.g1054.t1;Parent=g1054.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS exon 553 640 . - . ID=g1054.t1.exon2;Parent=g1054.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS CDS 553 640 . - 1 ID=cds.g1054.t1;Parent=g1054.t1 #PROT g1054.t1 g1054 MLTPRSRRVSPDFATDAAFEVSVEAIKDGFALSSKQLTEANASLSASVASQQSASHSIVVVVDERDDAAARDRDRVDRLRRYAEYQRQLQAERVASSHRQYRVMRSHAAFHNTVGYVYESGVESTASEFTLPVFNYAFSEKFRLVNSLTNDESEIVVSYKLRPPKADPSSASQGPSLSTLKLDGVDACTAIVLDDPLADRFSFEDLRLRFNLPATERLVGREKCRPVVLNSDTFDAIHESVVAEISRSTLKDVGMGALALVGAITLLIIPYLIVDSETAIGDISVDLIHFESITAHLGGDYSVD* # ORIGINAL: g1055.t1 original gene structure, not modified by PASA NODE_1517_length_10787_cov_42.4038 AUGUSTUS gene 3866 4456 . - . ID=g1055;Name=g1055.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS mRNA 3866 4456 . - . ID=g1055.t1;Parent=g1055;Name=g1055.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS exon 3866 4456 . - . ID=g1055.t1.exon1;Parent=g1055.t1 NODE_1517_length_10787_cov_42.4038 AUGUSTUS CDS 3866 4456 . - 0 ID=cds.g1055.t1;Parent=g1055.t1 #PROT g1055.t1 g1055 MTYSVLTPLYSGSSTLKHPHKRQLHLLHTSGMWLKERQLAPCGQHQRIDSNMRLKERQLSPYGQHQRIDSNMRLKERQLPPRGQQQRIDSNMRLKERQLAPCGQPLRLDSHMRMKERQLSPCGQQQRIDSNMRLKEQQLSICGQQQRLDSHMRSKERQLSPCGQQQRLDSHMRMKERQLPPCGQQQRLDSQMLSME* # PASA_UPDATE: g9632.t1, single gene model update, valid-1, status:[pasa:asmbl_3495,status:12], valid-1 NODE_2099_length_7741_cov_37.7264 . gene 6017 7622 . - . ID=g9632;Name=g9632.t1 NODE_2099_length_7741_cov_37.7264 . mRNA 6017 7622 . - . ID=g9632.t1;Parent=g9632;Name=g9632.t1 NODE_2099_length_7741_cov_37.7264 . exon 7342 7622 . - . ID=g9632.t1.exon1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . CDS 7342 7622 . - 0 ID=cds.g9632.t1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . exon 6928 7120 . - . ID=g9632.t1.exon2;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . CDS 6928 7120 . - 1 ID=cds.g9632.t1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . exon 6617 6718 . - . ID=g9632.t1.exon3;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . CDS 6617 6718 . - 0 ID=cds.g9632.t1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . exon 6342 6449 . - . ID=g9632.t1.exon4;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . CDS 6342 6449 . - 0 ID=cds.g9632.t1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . exon 6017 6182 . - . ID=g9632.t1.exon5;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . CDS 6138 6182 . - 0 ID=cds.g9632.t1;Parent=g9632.t1 NODE_2099_length_7741_cov_37.7264 . three_prime_UTR 6017 6137 . - . ID=g9632.t1.utr3p1;Parent=g9632.t1 #PROT g9632.t1 g9632 MHALLCFVYAGIPQFWLTALQSHPTIEEQIKEHDLPILRHLTDIELENLTEGNGFKLLFHFSPNEFFSDAVLTKTYHLEWEEDEAEQVFAKSEGQPINWKSGKNVTVKQIKKKQKHKAKGTTRTVTKEVPNESFFTFFSPPDMPESEEEEDEEEDDERYKTQEQLAIDFEIGDVLRTQIVPKAVEWFTGEAKFDEEGDYDEMDDDEDGDEDGDDDDEDEDRDPDFDPKNVPKGQQPPECKQQ* # ORIGINAL: g9631.t1 original gene structure, not modified by PASA NODE_2099_length_7741_cov_37.7264 AUGUSTUS gene 428 5690 . + . ID=g9631;Name=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS mRNA 428 5690 . + . ID=g9631.t1;Parent=g9631;Name=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 428 579 . + . ID=g9631.t1.exon1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 428 579 . + 0 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 868 1009 . + . ID=g9631.t1.exon2;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 868 1009 . + 1 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 1178 1301 . + . ID=g9631.t1.exon3;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 1178 1301 . + 0 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 1787 2028 . + . ID=g9631.t1.exon4;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 1787 2028 . + 2 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 2362 2529 . + . ID=g9631.t1.exon5;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 2362 2529 . + 0 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 2783 2859 . + . ID=g9631.t1.exon6;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 2783 2859 . + 0 ID=cds.g9631.t1;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS exon 3074 5690 . + . ID=g9631.t1.exon7;Parent=g9631.t1 NODE_2099_length_7741_cov_37.7264 AUGUSTUS CDS 3074 5690 . + 1 ID=cds.g9631.t1;Parent=g9631.t1 #PROT g9631.t1 g9631 NLKDLRDTFPNVRITALTATANSAVIRDISLRLALTTAEVYIGSVNRPNIRYDVRLRGTNRQCTSELLSFIHDNHSGKSGIVYCRRRRDCNEVADFLRSHGIAAAPFHSEIARDSKKATLEDWHKGDVKVIVGTEAFGMGIDRADVRFVVHLYLPKSIVAYFQESGRVGRDGQPAHSVIFYDMNDVAKNSDGVESVSRMHVDGKNPSKMHTTKVDSTFPKAMEMLALCENRRDCRRTTLLRHFGEVFDPADCKGGCDVCDGGRTTSVVDITWIAKEAVNLVLGNTQRAPCSFSAVRKTLRGSNGKGAMKGNTGTQHGVLADLSEEEVDAILLRLVFAAALDLVAHKNSDGDRPYLVLRPGRCHGPLVAQSGVTVVDNDNDDKAPENGHNESASARFVAHVPDALAAKLRSLRRSVCAVAWKGAACDDMPTWQWLRWEGLPPWAGCMRAPIDAVHQVVKLDVRADPQSRLSRALSIQRASCVHGGRNAGSRAAVSRKRSASAADIGNGDDGGDDGDNCKKRPRTRAEVGGVWRPLLHPRLNLYNLLWFKEYQSTRGGINSNRADGLSCASTAPTRGRSRAAGVGVGGSGRKTDAHKQASRQPAPKPDGSLGNASHDNGALVSLTHAARGPVVLVVDALDRVPTVLGRRLRKSDNSLELLVVWAHRLSARDACGRWEAADIRSNVALKRALSDFVKKLKEVGSIPEEDVDAWNGTEQRLPHVPSICTTAVERASLGDGRCSATSATSTPSKYNGIGNGKATTPASTPGSQSHRALESKRAVSQSTLDFVAGDYLREKSVVMGRIRKEIGCDGATQRQKRKVLSRHVLDIVGRRRPHNGDDDGLEYLVIWSADANPLQYELRWETNVELAGKLTHAHDLERRLDEYSEGNGGCDAAGTRFFMQSWKGTQILDVETCIEELDCVVDEDMVERVVGVSCRGGGKRRSGKGPDGTQHPRNFTNAHPNTRAITDRAAVESGALDAGVCVTDDALMLCDNDQVNSFADDIYGGDDFGVEPYVCGDAEEPMWDGIDAEFEAVDDCGMIYGLEDAGDADGGACASEDVAGSADTRVSRGEGMDMDNGSNSSDSSDSTDDSSDHHHYGTNRSSNSNNNNNNNNNNNTAAATPNGFVHKRSNGHTLCGATAMPSHNDRHARNAGVGFAHQKTPRKPEIIDLTLNF* # PASA_UPDATE: g313.t1, single gene model update, valid-1, status:[pasa:asmbl_9849,status:12], valid-1 NODE_890_length_16211_cov_41.1186 . gene 166 2542 . - . ID=g313;Name=g313.t1 NODE_890_length_16211_cov_41.1186 . mRNA 166 2542 . - . ID=g313.t1;Parent=g313;Name=g313.t1 NODE_890_length_16211_cov_41.1186 . five_prime_UTR 2500 2542 . - . ID=g313.t1.utr5p1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 2406 2542 . - . ID=g313.t1.exon1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 2406 2499 . - 0 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 2152 2289 . - . ID=g313.t1.exon2;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 2152 2289 . - 2 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 1841 1893 . - . ID=g313.t1.exon3;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 1841 1893 . - 2 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 1476 1593 . - . ID=g313.t1.exon4;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 1476 1593 . - 0 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 1069 1271 . - . ID=g313.t1.exon5;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 1069 1271 . - 2 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 395 551 . - . ID=g313.t1.exon6;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 395 551 . - 0 ID=cds.g313.t1;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . exon 166 250 . - . ID=g313.t1.exon7;Parent=g313.t1 NODE_890_length_16211_cov_41.1186 . CDS 166 250 . - 2 ID=cds.g313.t1;Parent=g313.t1;3_prime_partial=true #PROT g313.t1 g313 MANKCLRCKLTVYATERFPGMDTCWHKNCFKCSNERCGTLLNLKTYVSFGDKIFCKNHMPAPRATLVTKNVAQKANFGDKTGGTTSKDVKTPTKEADAKSTPAQAEQRARSSSTLKGDEVSVSDNDMKAIIERGANCKRCGIQVVGIATVAAGNVFHEACFACIKCTKPILPGHSFTCEGADGDPTCADCVPSVKCTACNKQIVSEYLVTGYGGNLHSQCHVCCVCKSVFGTEEYIVTDGKAYCKKDNPVAQLSDCAACGKAVDEGVEALDKMWHAECFLCS # PASA_UPDATE: g317.t1, single gene model update, valid-1, status:[pasa:asmbl_9850,status:12], valid-1 NODE_890_length_16211_cov_41.1186 . gene 14081 16084 . - . ID=g317;Name=g317.t1 NODE_890_length_16211_cov_41.1186 . mRNA 14081 16084 . - . ID=g317.t1;Parent=g317;Name=g317.t1 NODE_890_length_16211_cov_41.1186 . exon 15506 16084 . - . ID=g317.t1.exon1;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . CDS 15506 16084 . - 0 ID=cds.g317.t1;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . exon 15052 15352 . - . ID=g317.t1.exon2;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . CDS 15052 15352 . - 0 ID=cds.g317.t1;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . exon 14081 14687 . - . ID=g317.t1.exon3;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . CDS 14128 14687 . - 2 ID=cds.g317.t1;Parent=g317.t1 NODE_890_length_16211_cov_41.1186 . three_prime_UTR 14081 14127 . - . ID=g317.t1.utr3p1;Parent=g317.t1 #PROT g317.t1 g317 MRVAYTPLQPLTISLVYTKRRYFIKSEDNGNTKFASRPSHGKGGLLSVSDIASPTPMQRRFLDACANTLGLDVLDDCNGGHTAGDASTDGDTSTPRFVGCCPAQVTTRNGRRESTATAYLYPALDRANLTVVTDAHVTAVVFEAVNDGEMAAVGVRLVKSGVERVVRASHEVILSAGAVGSPHILLLSGVGPKEHLESHGIPVIADLPVGDNLQDHVIALVSKAAPESLVVGNHSQSLWNLADWMINGRGPLAYTSIEALAFFRTNATTLASSDTQPDLQLHFCSYGGNWRDKHNMNINHDLSCPTPDSGVTVLPTLLHPKSTGTVRLASRNPTDHPLIDPNYLSHEQDMRVMIEGLRISRMLLDSPDFANVTTEWPCDPTHFTKGMESPPEPFSDEFYAEVARKTTVTVYHPAGTCKMAAETDPSGVVDPRLRVRGVRRLRVVDASVMPTVVGGNTNAPTIMIAEKAADMIKEDWAAA* # PASA_UPDATE: g314.t1, single gene model update, valid-1, status:[pasa:asmbl_9852,status:12], valid-1 NODE_890_length_16211_cov_41.1186 . gene 2897 3747 . + . ID=g314;Name=g314.t1 NODE_890_length_16211_cov_41.1186 . mRNA 2897 3747 . + . ID=g314.t1;Parent=g314;Name=g314.t1 NODE_890_length_16211_cov_41.1186 . five_prime_UTR 2897 2936 . + . ID=g314.t1.utr5p1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . five_prime_UTR 3034 3061 . + . ID=g314.t1.utr5p2;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . exon 2897 2936 . + . ID=g314.t1.exon1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . exon 3034 3101 . + . ID=g314.t1.exon2;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . CDS 3062 3101 . + 0 ID=cds.g314.t1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . exon 3238 3332 . + . ID=g314.t1.exon3;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . CDS 3238 3332 . + 2 ID=cds.g314.t1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . exon 3445 3480 . + . ID=g314.t1.exon4;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . CDS 3445 3480 . + 0 ID=cds.g314.t1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . exon 3591 3747 . + . ID=g314.t1.exon5;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . CDS 3591 3659 . + 0 ID=cds.g314.t1;Parent=g314.t1 NODE_890_length_16211_cov_41.1186 . three_prime_UTR 3660 3747 . + . ID=g314.t1.utr3p1;Parent=g314.t1 #PROT g314.t1 g314 MPKCPACNKEVYAAEKKTSLGKDWHQFCLKCAECKKTLQSGQHAEREGKPYCTHPCYAKLFGPGGYGHGGAESHKQFGK* # PASA_UPDATE: g316.t1, single gene model update, valid-1, status:[pasa:asmbl_9854,status:3], valid-1 NODE_890_length_16211_cov_41.1186 . gene 8706 13893 . + . ID=g316;Name=g316.t1 NODE_890_length_16211_cov_41.1186 . mRNA 8706 13893 . + . ID=g316.t1;Parent=g316;Name=g316.t1 NODE_890_length_16211_cov_41.1186 . five_prime_UTR 8706 9032 . + . ID=g316.t1.utr5p1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 8706 9091 . + . ID=g316.t1.exon1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 9033 9091 . + 0 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 9250 9341 . + . ID=g316.t1.exon2;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 9250 9341 . + 1 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 9552 11083 . + . ID=g316.t1.exon3;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 9552 11083 . + 2 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 11378 11670 . + . ID=g316.t1.exon4;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 11378 11670 . + 0 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 12033 12224 . + . ID=g316.t1.exon5;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 12033 12224 . + 1 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 12367 12388 . + . ID=g316.t1.exon6;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 12367 12388 . + 1 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 12760 12954 . + . ID=g316.t1.exon7;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 12760 12954 . + 0 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . exon 13123 13893 . + . ID=g316.t1.exon8;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . CDS 13123 13395 . + 0 ID=cds.g316.t1;Parent=g316.t1 NODE_890_length_16211_cov_41.1186 . three_prime_UTR 13396 13893 . + . ID=g316.t1.utr3p1;Parent=g316.t1 #PROT g316.t1 g316 MGVLPTLSYAEGVNDSPYHRASLRVTESCLELLKSQYDRLTESASYAKSKGLSYIDAQDDLAESLLIFTATDRINDKEVCGKIERFSAAMKEVSEHHRTMLEVNDEIGTALQSFLGEELRAFREKKESARGAGEAFDAMLQKYCSISKTSVQKDSTLHLDNADKMWSAKQIFYAKSLDLVDSVNSLDRREQVNVTSQIRTLVSAQREFYRKALALMDNIVGDLDHVDHRVSQSAKEEKEAVEKSNAARVRIEKDALTVLKRQKCRTKIAKFQTTASEKRGYLYRKEPGKDGGKDVWVLRYFSIENGILYHQKREKSERRALSPSSNRKSVAIPEDTMGDLKRTGTNTAESKRTSGGAVTSNPDAPHRNRSGTLALTIDTQKAHRSTLSADDSDEDMRKRKDSSSDPSTPGSLQIQRRSIKDLQRAAKEVTAIEMDAPILIGNMSLCTVKPAYTLDRINCFEVITPSESTVLQAFSEDEMQEWFSVMQNAIAASLDAGHANNSRQVSNANKELVEQLKHAGGNGECVDCGTKDPEWASINLGIMVCIECSGIHRNLGVHVSKVRSLTLDKWSDGLLKMMIALGNGVSNAVYEETLPSDANVRKPPPNAPRAEKESFVRAKFETREWVRRELGGAVNPTKDDVDAMLYDAAANGDILTVYKAIALGGNVNVVAPNSGGKSALHVAAIGGHLQIAHLLVQSGADPDVRDDTLHKPSNYNKALAEFETADESIKTATPTRTLIPLFPEEKNKSAYPPEAVFTAGVHYGYLKKLDHKGKSWAKRYLILNNSILYFFKSHKEVKGTNVNEWTGKARAKIVTPGYHIASAVHETGTEFSFMLSHSGMRTYYFAASDKDDMDTWMTKLATATQAGDVGDTQGNIDDGDDSDND* # PASA_UPDATE: g315.t1, single gene model update, valid-1, status:[pasa:asmbl_9853,status:3], valid-1 NODE_890_length_16211_cov_41.1186 . gene 4722 7680 . + . ID=g315;Name=g315.t1 NODE_890_length_16211_cov_41.1186 . mRNA 4722 7680 . + . ID=g315.t1;Parent=g315;Name=g315.t1 NODE_890_length_16211_cov_41.1186 . five_prime_UTR 4722 4912 . + . ID=g315.t1.utr5p1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 4722 4939 . + . ID=g315.t1.exon1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 4913 4939 . + 0 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 5031 5126 . + . ID=g315.t1.exon2;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 5031 5126 . + 0 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 5223 5298 . + . ID=g315.t1.exon3;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 5223 5298 . + 0 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 5405 5507 . + . ID=g315.t1.exon4;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 5405 5507 . + 2 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 5655 5665 . + . ID=g315.t1.exon5;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 5655 5665 . + 1 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 5778 5948 . + . ID=g315.t1.exon6;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 5778 5948 . + 2 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 6096 6280 . + . ID=g315.t1.exon7;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 6096 6280 . + 2 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 6425 6526 . + . ID=g315.t1.exon8;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 6425 6526 . + 0 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 6643 6722 . + . ID=g315.t1.exon9;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 6643 6722 . + 0 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 6852 6959 . + . ID=g315.t1.exon10;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 6852 6959 . + 1 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 7068 7169 . + . ID=g315.t1.exon11;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 7068 7169 . + 1 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . exon 7318 7680 . + . ID=g315.t1.exon12;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . CDS 7318 7483 . + 1 ID=cds.g315.t1;Parent=g315.t1 NODE_890_length_16211_cov_41.1186 . three_prime_UTR 7484 7680 . + . ID=g315.t1.utr3p1;Parent=g315.t1 #PROT g315.t1 g315 MADTAVLTMDSSQFIGGLKRKISSDGDADLFQAAKRPKHDEPSPAHIDPVVPDSDTNTAPAVNGHRGPSPQAQVEVAKEQPIVTAIPNEAPLQRQPPKRNVEPLQTWTYAPGDLIPDIDEHIDETIEVHIQPRHLTTANEQISNRQVWGSGIYTDDSDIVAAVVHSGLFTPTDAIPDVGMIVSIKVLPQQGNYGSAVIKSMRSRSWQAHEGCSFKIVNVVRQKLSSKADTKQTEESKEAKLEAWRKERAARARARKLRGKERRGGFGDFLPDVSLIYNISNDPCLKYTTNLIADRGTDPHAWTSNRLKNEVIYLETERERYELSVASPAFSKENPSLFDKYRWARVQNPQQLNRHTLEGIAVPLKTEHIDVIHSDLDWADVKWTANSIVIRDTTYSLSRMFWAPVRLQ* # PASA_UPDATE: g12757.t1, single gene model update, valid-1, status:[pasa:asmbl_135,status:12], valid-1 NODE_1036_length_14528_cov_41.3203 . gene 12556 14511 . + . ID=g12757;Name=g12757.t1 NODE_1036_length_14528_cov_41.3203 . mRNA 12556 14511 . + . ID=g12757.t1;Parent=g12757;Name=g12757.t1 NODE_1036_length_14528_cov_41.3203 . five_prime_UTR 12556 12786 . + . ID=g12757.t1.utr5p1;Parent=g12757.t1 NODE_1036_length_14528_cov_41.3203 . exon 12556 13921 . + . ID=g12757.t1.exon1;Parent=g12757.t1 NODE_1036_length_14528_cov_41.3203 . CDS 12787 13921 . + 0 ID=cds.g12757.t1;Parent=g12757.t1 NODE_1036_length_14528_cov_41.3203 . exon 14324 14511 . + . ID=g12757.t1.exon2;Parent=g12757.t1 NODE_1036_length_14528_cov_41.3203 . CDS 14324 14511 . + 2 ID=cds.g12757.t1;Parent=g12757.t1 #PROT g12757.t1 g12757 MSGCGHECHEKNQHQHILWLDQLILQHPRTDWFGAVQATCGHPYSTRISASDAQTMDKQQSLHDQLSRGDHFNSRGDYARAVACYTKAVEIDAGCTVAFTSRGEAYTAQGMHDLAVADFRRAIALEPDNPALYVFMGDCHHAVGDYEQAIASYTRAIEMDPDEATYWSSRGDSYHCKGDYDLAVADFTRAILLDPNDELAYVSRAMSCRLQGNYPQAILDCTKAVELNPRDPIPYNSRGVALHFQGKYEMAVANFTRAIELDPNFANPYTRRGRSYLALGNHVQALVDCTHAIDINPRSSRFYGNRAYVRLAHGDYDNAIADASRAIEIEERNVAAYCYRGIALEGKRMHAEALRDFVRAGELSPRDAESNMELEKIRGHYLRCKHIVEGGSNGLTVAHTTTQHHGSAGSVNPGNNPGNSGFGMQSASGGDVGGLGGMCV* # PASA_UPDATE: g12755.t1, single gene model update, valid-1, status:[pasa:asmbl_133,status:12], valid-1 NODE_1036_length_14528_cov_41.3203 . gene 9561 10542 . - . ID=g12755;Name=g12755.t1 NODE_1036_length_14528_cov_41.3203 . mRNA 9561 10542 . - . ID=g12755.t1;Parent=g12755;Name=g12755.t1 NODE_1036_length_14528_cov_41.3203 . five_prime_UTR 10499 10542 . - . ID=g12755.t1.utr5p1;Parent=g12755.t1 NODE_1036_length_14528_cov_41.3203 . exon 10109 10542 . - . ID=g12755.t1.exon1;Parent=g12755.t1 NODE_1036_length_14528_cov_41.3203 . CDS 10109 10498 . - 0 ID=cds.g12755.t1;Parent=g12755.t1 NODE_1036_length_14528_cov_41.3203 . exon 9561 9764 . - . ID=g12755.t1.exon2;Parent=g12755.t1 NODE_1036_length_14528_cov_41.3203 . CDS 9582 9764 . - 0 ID=cds.g12755.t1;Parent=g12755.t1 NODE_1036_length_14528_cov_41.3203 . three_prime_UTR 9561 9581 . - . ID=g12755.t1.utr3p1;Parent=g12755.t1 #PROT g12755.t1 g12755 MASLLEQPQSSSQSRGRILVYCASSTKSDPYYLDEADRLGRLLAEHGKLLVYGGGGSGLMGRLADGTLAAGGKVLGIMPNFMKELEWAHNGLTELRLVGTLHERKLAMMQESDAIVALPGATGTFEELFEAVSWKRLGLVHSPIIVVNLRGFYDPLVALLNKAVEAGFMTTEGLGACIFVDSIDDIFKHV* # PASA_UPDATE: g12753.t1, single gene model update, valid-1, status:[pasa:asmbl_132,status:12],[pasa:asmbl_136,status:12], valid-1 NODE_1036_length_14528_cov_41.3203 . gene 451 4034 . - . ID=g12753;Name=g12753.t1 NODE_1036_length_14528_cov_41.3203 . mRNA 451 4034 . - . ID=g12753.t1;Parent=g12753;Name=g12753.t1 NODE_1036_length_14528_cov_41.3203 . exon 2902 4034 . - . ID=g12753.t1.exon1;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . CDS 2902 4034 . - 0 ID=cds.g12753.t1;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . exon 2051 2621 . - . ID=g12753.t1.exon2;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . CDS 2051 2621 . - 1 ID=cds.g12753.t1;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . exon 1505 1645 . - . ID=g12753.t1.exon3;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . CDS 1505 1645 . - 0 ID=cds.g12753.t1;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . exon 1149 1277 . - . ID=g12753.t1.exon4;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . CDS 1149 1277 . - 0 ID=cds.g12753.t1;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . exon 451 954 . - . ID=g12753.t1.exon5;Parent=g12753.t1 NODE_1036_length_14528_cov_41.3203 . CDS 451 954 . - 0 ID=cds.g12753.t1;Parent=g12753.t1;3_prime_partial=true #PROT g12753.t1 g12753 MFARLLKPVEGAAAAASTAAHNPQDEIDSLKEQLAANEDKLKRYETRLKDVVRAYKHVVKEKEELEESFKALAGGDYAGESTETAEEQGAESRAGLNTTNNGALDNVNHAASTDSLHRDGAESHKEHAQEQQQQQQQQLRVGESTQCGSAGADATDTSGRQPSGDATSDGGDGAIVTRSDTPAPSTQDAGDPLKASPLIKGMSSLTLNPTPVPHSHGENTSGQRDKVAALTRAVATLTDERNRLQNDYRAEKKDLLASHREEVASLQRKIESLVAEVAATQAEVKAAKYESDERGGLVDELRMFVDAQQKQHEREKAMLVACEADLRERVRSLERSASVAAMHDDVVKELERRVRVARDSELSALTQLSERTDDFQKKLAEATASAEIEFRERLESALHLAATADDRIATLSASHEAALESVRRRIEQAEAQVSAERTRSTALESHAFELEGKVSDLSATIGFLERSRAADRDAIQRLKAELSAASAETAESELSRDLWRADASEGERPRSAMGTKGGYGEMSDELALARAEVERLTDEFKRYKQWAKGTMKRRESTAGTAGPPAPQNTVPTAAIDASSMSQGLPHFETASHALVSKLETERTAAETAKRELEYKVLYLEKRISAAAEEKAQLESVLVSHVEGMAEARAQRDKTRAIIADKDAELDRLHTLLRAAGLFDESVVVSRRDASVTSSLSGLEEVLGYHISPDKTSQTSDRDASGGVNGGVAVTPGGDLRNVSKAPGLSFHHAQMLQRKDAEIASLRKQRGEISEALRDAEEVAARQGEQLSALKEEIRKMERDKSRESTNLEYLKNVVLKFMAEESGHE # ORIGINAL: g12754.t1 original gene structure, not modified by PASA NODE_1036_length_14528_cov_41.3203 AUGUSTUS gene 4759 8731 . + . ID=g12754;Name=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS mRNA 4759 8731 . + . ID=g12754.t1;Parent=g12754;Name=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 4759 4788 . + . ID=g12754.t1.exon1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 4759 4788 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 5000 5103 . + . ID=g12754.t1.exon2;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 5000 5103 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 5289 5432 . + . ID=g12754.t1.exon3;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 5289 5432 . + 1 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 5588 6113 . + . ID=g12754.t1.exon4;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 5588 6113 . + 1 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 6269 6367 . + . ID=g12754.t1.exon5;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 6269 6367 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 6628 6912 . + . ID=g12754.t1.exon6;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 6628 6912 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 7086 7139 . + . ID=g12754.t1.exon7;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 7086 7139 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 7451 7618 . + . ID=g12754.t1.exon8;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 7451 7618 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 7763 8044 . + . ID=g12754.t1.exon9;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 7763 8044 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 8224 8313 . + . ID=g12754.t1.exon10;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 8224 8313 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS exon 8624 8731 . + . ID=g12754.t1.exon11;Parent=g12754.t1 NODE_1036_length_14528_cov_41.3203 AUGUSTUS CDS 8624 8731 . + 0 ID=cds.g12754.t1;Parent=g12754.t1 #PROT g12754.t1 g12754 MVTLTEGALRAIHEKQMPQSPILQVINIKKINAAANNPSSPERYRVIVSDGQYYHQNTMLATQLNNLIHENLLNKFSIIRVDKFVCNEVQDKRILILLAVNVIHSQYDTRIGDPKQIDAAPGEDTSEPHTVPSSAARPPNAYARSAANTAAAAAPASTPTYNSGKAPNPYASGAYGGSAASFTGPSAAHSAPSNSSRVVQPIKSLSLYNQKWTICVRVTNKSNMRTYTNAKGEGKLFSVDLCDADGELRATAFNDTADKFYDLLVVNKVYYISKATLKYPNAKFGGRGNFELTFNSDSIIEPCNDTCDIPLIKYDFVEIGALESVQPGSVCDVIGVISNVGELGSITQKTTGKQVPKREVTIVDDSGRSVNITLWDSQAEAFNGAGFPVLAIKSAKLSDFNGRSLSSSVGSSITLNPDIERAHVLRGWFDSQQGQIAAVPFSGSARDGPRTDPRKTVGQIKDEQLGMHDKADYFALKGTIMFIKKENVVYMACASPNCNKKVTDNGSGEYSCEKCNTTSPNFKWRMMLTFTAADATGAQWLTSFQETAELILGQSASDIGMHKNTNEEEYDKVFARALFGRYIFKVKAKSDTFQDETRLRCSVLTATPVDYKKESDLLLKQLQEIGVTA* # PASA_UPDATE: g12756.t1, single gene model update, valid-1, status:[pasa:asmbl_134,status:12], valid-1 NODE_1036_length_14528_cov_41.3203 . gene 11043 12219 . - . ID=g12756;Name=g12756.t1 NODE_1036_length_14528_cov_41.3203 . mRNA 11043 12219 . - . ID=g12756.t1;Parent=g12756;Name=g12756.t1 NODE_1036_length_14528_cov_41.3203 . five_prime_UTR 12103 12219 . - . ID=g12756.t1.utr5p1;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . exon 11764 12219 . - . ID=g12756.t1.exon1;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . CDS 11764 12102 . - 0 ID=cds.g12756.t1;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . exon 11454 11578 . - . ID=g12756.t1.exon2;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . CDS 11454 11578 . - 0 ID=cds.g12756.t1;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . exon 11043 11232 . - . ID=g12756.t1.exon3;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . CDS 11058 11232 . - 1 ID=cds.g12756.t1;Parent=g12756.t1 NODE_1036_length_14528_cov_41.3203 . three_prime_UTR 11043 11057 . - . ID=g12756.t1.utr3p1;Parent=g12756.t1 #PROT g12756.t1 g12756 MSIVVGPLRSNSEMVLRAAKQCLFLMTAAQRCTGVTRTPVLSRLGVSSLTWAQSLYASQSHKTQPSSLPQLPPVLHVAALRKYASSAAARDTTAPQETVKDLGPIKVTDAFLKKMKLALSIRPNVRLRLVVLAGGCHGFNYDIHLVDGAADPTDIVLDAGDGVLVSVEQTSLPLLEGSIVTYKDDLRAHAFSVLQNPNAEKGCGCGNSFSPK* # PASA_UPDATE: g4930.t1, single gene model update, valid-1, status:[pasa:asmbl_5364,status:12],[pasa:asmbl_5365,status:12], valid-1 NODE_2998_length_4570_cov_39.873 . gene 709 4470 . - . ID=g4930;Name=g4930.t1 NODE_2998_length_4570_cov_39.873 . mRNA 709 4470 . - . ID=g4930.t1;Parent=g4930;Name=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 4433 4470 . - . ID=g4930.t1.exon1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 4433 4470 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 4092 4176 . - . ID=g4930.t1.exon2;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 4092 4176 . - 1 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 3923 3957 . - . ID=g4930.t1.exon3;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 3923 3957 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 3375 3750 . - . ID=g4930.t1.exon4;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 3375 3750 . - 1 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 3090 3140 . - . ID=g4930.t1.exon5;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 3090 3140 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 2843 2898 . - . ID=g4930.t1.exon6;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 2843 2898 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 2488 2552 . - . ID=g4930.t1.exon7;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 2488 2552 . - 1 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 2283 2335 . - . ID=g4930.t1.exon8;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 2283 2335 . - 2 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 1985 2041 . - . ID=g4930.t1.exon9;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 1985 2041 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 1628 1707 . - . ID=g4930.t1.exon10;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 1628 1707 . - 0 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 1422 1480 . - . ID=g4930.t1.exon11;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 1422 1480 . - 1 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . exon 709 1267 . - . ID=g4930.t1.exon12;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . CDS 978 1267 . - 2 ID=cds.g4930.t1;Parent=g4930.t1 NODE_2998_length_4570_cov_39.873 . three_prime_UTR 709 977 . - . ID=g4930.t1.utr3p1;Parent=g4930.t1 #PROT g4930.t1 g4930 MYCMLAWCTLNAIYKKTQLIEKLLNWKIHPQDLTWDKELGQGAFGKVYLGAYRGAKVAIKVLHLAGVFDDETSGISNKLSDRQSQSGHGRADSIGTNSAGKQNIAFGAFGGSNPDESDDRVKSKTSGVSSHVATHMGMHTIASRLTEQVERRPSWVRKFSTNRRRRRILKGALNDFTKEIDTLCALRHPNIIMFMGAVLQKPDLCLVTEFMERGSLYDVFRDTNVTWTFPLRVRIAIDTASGMEYLHAAHPPILHLDLKSPNVLLDRNYVAKIADFGLSRLKDRDADEGGIQIGTLLWMSPEMLREEGFSERSDVYSFGIIMWELLSLQIPYKEHAKPTASLTIDVAFNNLRPCLPRVCAPEYQELMEQCWDGAPTVRPAFSEVSRRLQAMDCRSWPPPVVDLEAPMEAEDVLS* # PASA_UPDATE: g7153.t1, single gene model update, valid-1, status:[pasa:asmbl_3264,status:12], valid-1 NODE_200_length_31961_cov_42.5245 . gene 5074 6973 . - . ID=g7153;Name=g7153.t1 NODE_200_length_31961_cov_42.5245 . mRNA 5074 6973 . - . ID=g7153.t1;Parent=g7153;Name=g7153.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 6962 6973 . - . ID=g7153.t1.utr5p1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 6815 6973 . - . ID=g7153.t1.exon1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 6815 6961 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 6552 6707 . - . ID=g7153.t1.exon2;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 6552 6707 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 6244 6408 . - . ID=g7153.t1.exon3;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 6244 6408 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 6018 6050 . - . ID=g7153.t1.exon4;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 6018 6050 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 5643 5855 . - . ID=g7153.t1.exon5;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 5643 5855 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . exon 5074 5485 . - . ID=g7153.t1.exon6;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . CDS 5111 5485 . - 0 ID=cds.g7153.t1;Parent=g7153.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 5074 5110 . - . ID=g7153.t1.utr3p1;Parent=g7153.t1 #PROT g7153.t1 g7153 MIRAASVMAHAMRQRPLVAVGQMTATADIEKNLGVCKGLIEQARARGAKMIFLPEAFDYIADKREQIYSLAQPIDGPLIAEFRCLARDSNMWISLGGFHEKHGDHRVYNSNVVIDAEGGVASIYRKVHLFDVDIKGSVRLKESDVTIPGGTVEPPVTTPIGKVGLGICYDIRFAEFALALAREGADAICYPSAFTQTTGMAHWEVLLRARAIETQCYVLAPAQTGTHNTNRTSYGHAMIVDPWGTIIAQCSDGTGICVAEIDTDLIEKIRTQMPVFTHRRPELYGDVRRITGSTRRHSLEHTTLDHTTDPSLSHANAATNSVVPHGASPAVAESAGHVDNVGAVAASDSTLAAATSSGGAAC* # PASA_UPDATE: g7154.t1, single gene model update, valid-1, status:[pasa:asmbl_3267,status:12],[pasa:asmbl_3271,status:12], valid-1 NODE_200_length_31961_cov_42.5245 . gene 7381 9147 . + . ID=g7154;Name=g7154.t1 NODE_200_length_31961_cov_42.5245 . mRNA 7381 9147 . + . ID=g7154.t1;Parent=g7154;Name=g7154.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 7381 7477 . + . ID=g7154.t1.utr5p1;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . exon 7381 7667 . + . ID=g7154.t1.exon1;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . CDS 7478 7667 . + 0 ID=cds.g7154.t1;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . exon 7959 8288 . + . ID=g7154.t1.exon2;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . CDS 7959 8288 . + 2 ID=cds.g7154.t1;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . exon 8590 9147 . + . ID=g7154.t1.exon3;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . CDS 8590 8903 . + 2 ID=cds.g7154.t1;Parent=g7154.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 8904 9147 . + . ID=g7154.t1.utr3p1;Parent=g7154.t1 #PROT g7154.t1 g7154 MAPCLIRHVAAAFALLCITSHLCATVRAADPDPGFLTDVIVGVIERTKISKIDVGLTDASLPGGVNLPITTDHLLVDLYKLNSTTIAIIPQLTAKEQHFDVNLNMTEISMDITLRPDIIPFDIKLSRTGNDTMSVAMQSETMELHVEMESDDFSMSGSMNAHRVAVDVMMISKEDSLSLHIESLGIEGAAGWMLLIIGYMVQTVMCVTAGYHYLKMRRAIRIMHEIERPIDSFVICSECGSKNVPGSRFCGLCGCAAVERSSAPSPMGVRPAALLGD* # PASA_UPDATE: g7151.t1, single gene model update, valid-1, status:[pasa:asmbl_3270,status:3], valid-1 NODE_200_length_31961_cov_42.5245 . gene 387 3367 . + . ID=g7151;Name=g7151.t1 NODE_200_length_31961_cov_42.5245 . mRNA 387 3367 . + . ID=g7151.t1;Parent=g7151;Name=g7151.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 387 979 . + . ID=g7151.t1.utr5p1;Parent=g7151.t1 NODE_200_length_31961_cov_42.5245 . exon 387 3367 . + . ID=g7151.t1.exon1;Parent=g7151.t1 NODE_200_length_31961_cov_42.5245 . CDS 980 3106 . + 0 ID=cds.g7151.t1;Parent=g7151.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 3107 3367 . + . ID=g7151.t1.utr3p1;Parent=g7151.t1 #PROT g7151.t1 g7151 MPPTPNNLLAPVLSASGGNQGGRVSPTPTHQTSKMPGLVDGAPASAVAELPHLSADPAAQAHQSPQGTHGARNGGTPKRYNEDLTMLGNYRLDYTLGKGSFAKVKAATHVVTGTKVAIKIMDKERLDKQGQLASFRREASMLRRLNHANIVRLYEIIETDRFFCLVMELLPNRDLLHLIESHGHLSEPVARNLIRKIVSALDYLHQNGYVHRDLKPENLMFDRNMEVKLVDFGLGNKFSHNGRLSTFCGSPKYASPEIIFGNKYVGPEVDVWSAGATLYAMVTGKVPFETDDVQALRAKMLRRELRIPSNLTNECRSLLKRMLSAEPAVRATIDEVRTHPWITADEGPIPPYERETANLRRLDGRLLELMEHMGFDRRRVIDSFRSNLCDRNTATYLLLEEKKRDRPMSDLYATLAPQLSANNASTNFSAANNSGSNNVSATPSMISAGAAGTDDGAVSFQELGIKGGSSHRRHRSQDPRAGDSQQRGPVHHVRRPSDDATRILGDGGTGAAGLNTPVAQSAPPSAPSSRRNSISRRSDDHLSLMSVDSDVFNASQPPSRGEPADPAVTGSPALVADTVVAKENILRRLARNVRGRLPSLGRSRSNPHLPKDDIVSDSQSARGSDPTPLAPLQPLSRQAVFSSTPLGIDNKDAHGSVVVPIPNPHTPAHRMQSNGAGSSTPMSVDGTSSEQTSPQSNGTRAGVASWIL* # PASA_UPDATE: g7157.t1, single gene model update, valid-1, status:[pasa:asmbl_3268,status:3], valid-1 NODE_200_length_31961_cov_42.5245 . gene 16702 21273 . + . ID=g7157;Name=g7157.t1 NODE_200_length_31961_cov_42.5245 . mRNA 16702 21273 . + . ID=g7157.t1;Parent=g7157;Name=g7157.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 16702 16776 . + . ID=g7157.t1.utr5p1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 16702 16924 . + . ID=g7157.t1.exon1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 16777 16924 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 17083 17224 . + . ID=g7157.t1.exon2;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 17083 17224 . + 2 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 17375 17907 . + . ID=g7157.t1.exon3;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 17375 17907 . + 1 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 18102 18458 . + . ID=g7157.t1.exon4;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 18102 18458 . + 2 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 18772 18839 . + . ID=g7157.t1.exon5;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 18772 18839 . + 2 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 19040 19192 . + . ID=g7157.t1.exon6;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 19040 19192 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 19509 19658 . + . ID=g7157.t1.exon7;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 19509 19658 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 19834 20010 . + . ID=g7157.t1.exon8;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 19834 20010 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 20176 20303 . + . ID=g7157.t1.exon9;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 20176 20303 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 20547 20592 . + . ID=g7157.t1.exon10;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 20547 20592 . + 1 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . exon 20817 21273 . + . ID=g7157.t1.exon11;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . CDS 20817 20951 . + 0 ID=cds.g7157.t1;Parent=g7157.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 20952 21273 . + . ID=g7157.t1.utr3p1;Parent=g7157.t1 #PROT g7157.t1 g7157 MVSPKVIATIVVASALLFGFGEARAISKDFSELAKQILAVMNRTVDPCDDFYQYACGSWLHSTPLPGESSRWSLATNSVDDKNREILRSILEDPSGEWPIIGPFYGTCKDMDARNKRGLQDIESHLADLKVASVADLFVVIGKLHALGATNTFFSSSVSADPMNPRVNILHLAQGGLTLDTPGDYNNADIVGKYTDYVKTVFVLSGSSDADAAAAAADVLSVERILATHSLDPASLRDPYATYHKTTHDAFVVSTPSIDAALWDAYFAAAGIQFDSASAEINVVTPAFFGNLSAATSAPLSALSNYVRFQFLNAVAPSLSEAFVDANFDFFGKTLTGQKEIAPLQKRCIASTDKNLGFLLGRYYVEQAFSAEARDLAVEMIKRIEDAFGENLKSVDWLDDETRELSKNKLSLVSKKIGYPDKWVDYASVAVNQDKSYVSNILAVQTFAATRQFAKLGKAVDPDEWDMTPPTVNAYYDPTKNVIAFPAGILQSPWFFNLTYPAALNFGGIGAAMGHELTHGFDDQGAQYDGTGRLHKWWPDNIFERFTERTRCVSDLYSGFSPVPGVFVNGNLTLGENVADIGGLHLAFDAYQSYTRDHGADPIVVEGLTNEQLFFVAYSFSWCEIETDAAVTRQVKVDPHSPAQFRVNGPLSQSPIFSDTFKCAKNSKMNPEKKCVVW* # ORIGINAL: g7159.t1 original gene structure, not modified by PASA NODE_200_length_31961_cov_42.5245 AUGUSTUS gene 25389 27944 . + . ID=g7159;Name=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS mRNA 25389 27944 . + . ID=g7159.t1;Parent=g7159;Name=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 25389 25575 . + . ID=g7159.t1.exon1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 25389 25575 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 25742 25794 . + . ID=g7159.t1.exon2;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 25742 25794 . + 2 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 25961 25981 . + . ID=g7159.t1.exon3;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 25961 25981 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 26163 26226 . + . ID=g7159.t1.exon4;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 26163 26226 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 26474 26907 . + . ID=g7159.t1.exon5;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 26474 26907 . + 2 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 27060 27179 . + . ID=g7159.t1.exon6;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 27060 27179 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 27488 27547 . + . ID=g7159.t1.exon7;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 27488 27547 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 27798 27944 . + . ID=g7159.t1.exon8;Parent=g7159.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 27798 27944 . + 0 ID=cds.g7159.t1;Parent=g7159.t1 #PROT g7159.t1 g7159 MDAIRLCTVLLVESVGMELGTDLKPASLPCCCAYAGPAGSQVEAEYGTGRDGLAVVEMALASGLEMVHGPQRNAMNTTSKGFGELIKTAYDRGCRKFLLGIGGSATNDGGLGALQALGVRVEVDNGDGTTSFPDPVYGRHLLSLKSVSLPSPPLDGRGLRATLLPGAEFQIACDVTNPLVGENGATRVFGPQKGVVSLPDGTGDGDRLEEGMRRFASLLVAGGWRDVQTLPGAGAAGGIGGGFAAVLDADLRKGMTILSDALELESHVANADFVITGEGSYDLQTAGGKVVSHVLELGLKHNVPVVVVCGVNKLPPESRSNAFDMVSHYGVEKALGDSAGCLEALVVDEWDSFRLRADISA* # PASA_UPDATE: g7158.t1, single gene model update, valid-1, status:[pasa:asmbl_3265,status:3], valid-1 NODE_200_length_31961_cov_42.5245 . gene 21269 24486 . - . ID=g7158;Name=g7158.t1 NODE_200_length_31961_cov_42.5245 . mRNA 21269 24486 . - . ID=g7158.t1;Parent=g7158;Name=g7158.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 24382 24486 . - . ID=g7158.t1.utr5p1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 24271 24486 . - . ID=g7158.t1.exon1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 24271 24381 . - 0 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 23548 24112 . - . ID=g7158.t1.exon2;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 23548 24112 . - 0 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 23093 23322 . - . ID=g7158.t1.exon3;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 23093 23322 . - 2 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 22809 22916 . - . ID=g7158.t1.exon4;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 22809 22916 . - 0 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 22370 22476 . - . ID=g7158.t1.exon5;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 22370 22476 . - 0 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 21754 22168 . - . ID=g7158.t1.exon6;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 21754 22168 . - 1 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . exon 21269 21574 . - . ID=g7158.t1.exon7;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . CDS 21377 21574 . - 0 ID=cds.g7158.t1;Parent=g7158.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 21269 21376 . - . ID=g7158.t1.utr3p1;Parent=g7158.t1 #PROT g7158.t1 g7158 MADAEVDRPAKRARLDPGTSDKELLVVFDTTLRDGEQSPGVTLTGNEKVEIARQLSRLGVTVCEAGFPIASEGDFDAVRRIATEVGPLTDGRASAKPMVICGLARAKKEDIDRAYDAVRQAPLHRIHTFLATSDIHLKHKLKISREQCVTQVKWAVSYARGLCPDIEFSPEDAGRSDRDFLVTVLGAAIEAGATTLNIPDTVGYNTPEEYGEIIRYLVENTAGANKVVWSTHCHNDLGLATANTLAGVRNGARQVEVTINGIGERAGNTSLEEIVMAIHTHAKDFPVHTEIDTTQIMRTSRMVSAYTGMVVQPNKAIVGANAFAHESGIHQDGMLKHQETYEIIRPETVGLKSNLVLGKHSGRHAFRSRLIELGYDNLSNEAVDRAFASFKKVADSKKSVTDFDIHAIFKDELLQPEELWKLNSIAVSCGDKLHATATISITSKDGVERVDAAIGVGPVDAIYLAIDRIVQVPKTLLEYQVKSITRGTDALGEVTVRLAPDTKDDASGDILSGSQPTFNGHGASPDILVASARAYISALNKLCAARKAATENGGANGHGNAGSSNGHAVDAREAAAV* # ORIGINAL: g7155.t1 original gene structure, not modified by PASA NODE_200_length_31961_cov_42.5245 AUGUSTUS gene 9496 13405 . - . ID=g7155;Name=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS mRNA 9496 13405 . - . ID=g7155.t1;Parent=g7155;Name=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 13249 13405 . - . ID=g7155.t1.exon1;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 13249 13405 . - 0 ID=cds.g7155.t1;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 10213 13004 . - . ID=g7155.t1.exon2;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 10213 13004 . - 2 ID=cds.g7155.t1;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 9895 9993 . - . ID=g7155.t1.exon3;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 9895 9993 . - 0 ID=cds.g7155.t1;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 9496 9747 . - . ID=g7155.t1.exon4;Parent=g7155.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 9496 9747 . - 0 ID=cds.g7155.t1;Parent=g7155.t1 #PROT g7155.t1 g7155 MVKAHIVVLEGDGIGPEVTREAVSVLRTIAELAGHEFTFTNLLIGGASIDATGIPLTGEAVRLCKAADAVLLGAVGGPKWNASPVRPEEGLLLLRKELGLFCNVRPVYLLSEEIAAQSSPIKADRLKGVDLVFVRELTGGLYFGDRKEATDASPSASDTCIYSKEEVERVVRFAAHLAKQRRGKLTQVDKANVLATSRLWRKVTQQIIDAEYPGVALDHALVDSMAMHLIQKPAEFDVIVTENMFGDILTDEASVLTGSLGLLPSASLGASGPGVYEPIHGSAPDIAGRFIANPCGAILSAAMLLRHSLKLESEAALIESAVRRALADGFRTRDVGGTKSTVEVGVAIVERVRALYGASLVKQPTQARRRPMNLSEKILCHNAIGLEKPEVRPGEMICVKVARTLASELTWKGMEKTYDEMGRPSINNNDRFWLAIDHTVDPSINDQAKPKELIAASERFAKEAGITDFYGPNQTILHTEFYRERAEPGTVVVGADSHSCSAGGLGCWAVGLGAADVVMPLVTGDTWLQVPETTRIIYTGKLPFGIGGKDVILHTMGRLKRNTVAFERAVEYCGNIESLSCDARFAISNMTTEFGGIVGVFPADEITAAYIARRPSKYRSEALYFRADPDAEYAETHEIKLEEVDSLVALFPSPDNVVTVDSVAGKELDGCFIGACTTGEEDLILGALVLEVALAEGFKPVSRGKRKVTPGSVPIVAKLRKLGLIDVYQRAGFEIGAPGCSYCLGIAADRAGEGEVWLSSQNRNFRNRMGKGSIANLASAATVAASSLGMTIANPRRFLDKIDRARYEDMLAEWKTSPHAPIQIIEPQPQLFNPQTDKILGAAVEKGAAGCGDACTCEAESCAKGASNACEKGACATCKKGSESKLPPIISGKAQVFEDNIDTDAIIPAEFMPGTDDEDLGGHAFQYVRPEFVPRVKEGFNIIVAGAGFGSGSSREEAVRALNGCGIKAVIARSFAFIYARNQPNMGLLGIVMRHDRFYELAVDGAEITIDVRKHTVSVAGESFPFDLSRVEERLLAGGGVIELYRRHKNDVFRRVTIPDVESRESETGASGAVGGCGSSSVPGAAKKGCGDSSGVLSW* # PASA_UPDATE: g7160.t1, single gene model update, valid-1, status:[pasa:asmbl_3269,status:3], valid-1 NODE_200_length_31961_cov_42.5245 . gene 28113 30631 . + . ID=g7160;Name=g7160.t1 NODE_200_length_31961_cov_42.5245 . mRNA 28113 30631 . + . ID=g7160.t1;Parent=g7160;Name=g7160.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 28113 28193 . + . ID=g7160.t1.utr5p1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . five_prime_UTR 28415 28447 . + . ID=g7160.t1.utr5p2;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 28113 28193 . + . ID=g7160.t1.exon1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 28415 28527 . + . ID=g7160.t1.exon2;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 28448 28527 . + 0 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 28728 28843 . + . ID=g7160.t1.exon3;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 28728 28843 . + 1 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 29094 29251 . + . ID=g7160.t1.exon4;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 29094 29251 . + 2 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 29625 29735 . + . ID=g7160.t1.exon5;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 29625 29735 . + 0 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 29996 30078 . + . ID=g7160.t1.exon6;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 29996 30078 . + 0 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . exon 30399 30631 . + . ID=g7160.t1.exon7;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . CDS 30399 30534 . + 1 ID=cds.g7160.t1;Parent=g7160.t1 NODE_200_length_31961_cov_42.5245 . three_prime_UTR 30535 30631 . + . ID=g7160.t1.utr3p1;Parent=g7160.t1 #PROT g7160.t1 g7160 MPLTNTELLATFVQFTSQTAGRDKIYRTLQYVSKILGAHYAGQKDMKLTIEKLSKLEGALGQSRKLFRLFKSLDFVQVIVKNHNHPDTFLRVAINARAASLAVWLIFDHIVWAAKVGLISADTARWTRVSSRFWLFALAVAIAKDIYVINAAKEKERKAKGGSPQPLYPTNAEQKTLYLDLIRDSFDIFLPASTLGYVQLSTRSVGIVGLVSSLIGGYQQWPKLKTA* # ORIGINAL: g7152.t1 original gene structure, not modified by PASA NODE_200_length_31961_cov_42.5245 AUGUSTUS gene 3670 4807 . - . ID=g7152;Name=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS mRNA 3670 4807 . - . ID=g7152.t1;Parent=g7152;Name=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 4765 4807 . - . ID=g7152.t1.exon1;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 4765 4807 . - 0 ID=cds.g7152.t1;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 4540 4630 . - . ID=g7152.t1.exon2;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 4540 4630 . - 2 ID=cds.g7152.t1;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 3963 4201 . - . ID=g7152.t1.exon3;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 3963 4201 . - 1 ID=cds.g7152.t1;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 3670 3755 . - . ID=g7152.t1.exon4;Parent=g7152.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 3670 3755 . - 2 ID=cds.g7152.t1;Parent=g7152.t1 #PROT g7152.t1 g7152 MRAVIQRVTSASVTVAGNVVGSAGRGLCVLVGISREDTQEDMDYIIRKVLAIRLFEDDAGKAWTKSVTDKDYDILCVSQFTLYASVNKGSKPDFHLAMGSDGSKEFYGRFLESIKKAYKPEKIQDGEFGAYMQVNIANDGPVTIQLDSRKDK* # ORIGINAL: g7156.t1 original gene structure, not modified by PASA NODE_200_length_31961_cov_42.5245 AUGUSTUS gene 14493 16001 . + . ID=g7156;Name=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS mRNA 14493 16001 . + . ID=g7156.t1;Parent=g7156;Name=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 14493 14822 . + . ID=g7156.t1.exon1;Parent=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 14493 14822 . + 0 ID=cds.g7156.t1;Parent=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 15000 15149 . + . ID=g7156.t1.exon2;Parent=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 15000 15149 . + 0 ID=cds.g7156.t1;Parent=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS exon 15357 16001 . + . ID=g7156.t1.exon3;Parent=g7156.t1 NODE_200_length_31961_cov_42.5245 AUGUSTUS CDS 15357 16001 . + 0 ID=cds.g7156.t1;Parent=g7156.t1 #PROT g7156.t1 g7156 MTGGTQFADPAAGPAYSKAFAPPGLSKGHSNAQPAFDRRQFVRHFTAGGIALSTSFAIMHPLDTLKTRIQAKAGGRPAMLTGLSSAQLYREVARIFSRGFTVSVLGAIPQGGMRFAAYQFSKGTFQRETQLPAVATSAISAMIGDLASSFVKVPREVITQRLQTDMYRGPSDAVRSILRTEGISGFYTGFLSSAVRDLPFMVILFVTYEQLKIIAAQRQQAKPAAMTATASSSSVAHPHSILTEQTTEGGDQHHHAHIHLPHISPQELAQEHSFVCGGIAGALAGLMTTPFDVIKTRIMTATKTVSADGTAAPRLNMRIVARQLYAEAGPKAFFAGSGHRSFWWFCVCSIFFQIYEQVKSMEVWEEDDRVPGQV* # ORIGINAL: g12384.t1 original gene structure, not modified by PASA NODE_1175_length_13381_cov_70.619 AUGUSTUS gene 2075 10484 . - . ID=g12384;Name=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS mRNA 2075 10484 . - . ID=g12384.t1;Parent=g12384;Name=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 3324 10484 . - . ID=g12384.t1.exon1;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 3324 10484 . - 0 ID=cds.g12384.t1;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 3043 3138 . - . ID=g12384.t1.exon2;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 3043 3138 . - 0 ID=cds.g12384.t1;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 2738 2808 . - . ID=g12384.t1.exon3;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 2738 2808 . - 0 ID=cds.g12384.t1;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 2389 2557 . - . ID=g12384.t1.exon4;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 2389 2557 . - 1 ID=cds.g12384.t1;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 2075 2143 . - . ID=g12384.t1.exon5;Parent=g12384.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 2075 2143 . - 0 ID=cds.g12384.t1;Parent=g12384.t1 #PROT g12384.t1 g12384 MALTRSISTAGGGASCAATRAWRVALTVTVALSCMMAHVAGIATAISITQEPSAAATSPSMGASASTSADHHPTPSDAEPSDAIFTQATDGIDMADTVLIDAVFNEIDASFENGDPSLFFSVSMNGSYKAAYDRDAGFRRSLSVRNGTTVLLSTNDAAAVWCRPSSANESAAVPMTRAPNAPLFVVERGGHLSIAGLAFRECALGTLVRVDEGGSLLITTATFQSTSCARGWAVDVIGDSYRGASFNVSGLATFVGSAILCNGTESSDSVFPFSESSDLAEMDSGDQWMANVIAPIFVAYGSAVIGMSSCTTSMRPIALLRDASHLDVSNTNMGLCIGGPCILATHSSSASFSGGTLQSTRIARVRDNAAIAFIGGIEIRSQAAEGVYIADGWDSGEHDHDVSSACTAFELGGNARMSADACHFVFNGCNGFEFDDSATGTLIDSTFVSDTTCDCFFTTGRSSRLRISRGALLAPTSYSITAVIGVHAGSSAVVVEDAMIQFTVRNDTASESLMRSNHQFVFSGSATGRFEGVTFSADAAPAESFDGARSHQHVIFVADLSSVIMERVSCYNCPGVVHAVGNTSVEMTNSACIGNNFMPPEESGAFSERYSPVMKGGLFLLGESATFRCDACHLTSLMRTMMGGIGYLGDASRAIISNTVVRTAGACESRGGGFFMTDNSSLDVFDSSFSRIFSMCNFHIYTLPFPPPGGGFAIMEGLAAIRVRNVSLSLVRARVGGLVWASGSAKIDVRGVNVDTLDVSDIGAAMYLSEDAAAVLSDAVLTNVLAGTEGLFYTKESSSLSVDDLTVSSTVTYRGGLLTALDLSVVRLRHVSIDSIDCSVIFVPDCNPPEDKACDSDDGSKKTWSYTANRVFPDASSDPDPNTIEGCAMYLAGTSTVSFESLSIRNATAQYTGAGLVIKDDAKATGSNLTLVSITSRGGGGAVTVRDRGALSAERLTVMMVASKVGACISASGSSVVKVVALYGSYLYTSFGGGCIYATGSAVVTVGGGEAISATTISGGGYVMATGSSNVTISGVTGRHFSAATGGFALVTANARLYLDDVHVWNASASGDGGALRINQQGSCEISASRFESCDAGASGGAVAVSSAGSLLIHSNSIASDCHAGGEGGAIVMTDSSVATITELSVHNAMSAGDGGFLFAAGNATVALTLSQVTVSMTIGGAGGFIAAEGSAAITIEKVSVAHTSAPKGTGGAFAIKGRSSLSVIGSSFANVSGHLAGGFLHQTGMSMARFSHVLVERAWTDGIGPGAVVRGQASLSMANTTLVEAIRQPGFGGGWLSADADVADTLRGVRTINCSEEYFGEGFSQNDEDIGLPGTPLRRELIRGPFSTDYILGYIRNGYRFTTFSVTGEVVADAVIDVDRNFGTQFVMYRSVVLRVRALATITDCYIQDAVEVTVLPTGRLRLYQVQLIASSITVEGLLHMSYVTLIDSSITVRSSGWLYCYGFKLSASSGEGVRRREDGGVGSLSRAIVLSDQSYAEIYGLESEDRLATAGNGGFASVSDSSVLRIVGGVFHSVSSTGSGGFVAAEAPAVVGGSTMRISVLYMLFLRCAAKFDGGLMWLRGNAIASISDSFIDWSSASGQGGLVYAAENSAATIIRTIIQRSSAVEGGGLFSLFGAANLTAIGLVVRDTSSLRGNGGVALLSPAAGAPGTPSLFMHGSTIESSTAMNGGAFYLSAAQLRVSSGTFRSTSATSLGGMMHLAGDGTSDVVFEDCAFDGSHSGLHGGLVSVTDLSSVVVNHCSMSDITSELDGGAFLVSRGSVVVTDSTFEMCRAVGKGGCFYMSGGTLLVTRSVVFNASADLGGGLAMLQSLANASFVNVSVVDCSAANVGGGVFYLSDRSNLTVDGLLVRGSFSLGLGGTLAADGRAVAILNNVDARGSSAAFGQGGFMSVVGYARLQMKHSRIDNASSDDAGGFAHINGEGHVDLLNVTIDLVSSRTGEGGAFNALFNAHVTLSNVSISRASTSLRGGVAYLAGSAIFVTNNLVVSSSTAAEGGVLFVASGASAVMIGASVTDSFADGNGGCLHSSSSSLVVVGGLFSGCRSGIVNATYGQGGFLYLDAAIVTGVHIQGVRVNDLHALSAPVVFTSRKLGVSMESLFESVGTRYAVFGDVNSTIATPATALVVALTRPSMRREAGDALIIFPSQLSGQALPAFSVSIVDAYGRPAFAPPSVPLAIRLVGKSAGNSSNTCTLSGDLTRTFSGISRVEYSNVRVSSSRVPVDCIVSIVPDNFLYNSGDDLFKGTALQTVEVAACNAGASLQGDASTGEYSCVPLTVSSPATASSSSNTTIVIAIVIPLIVLCLAVCGVAYFLAVRNRRRWNMKQLEDFARHMQNAQPDLAMLEVPRESVDLQEVLGEGAFGIVRKAQITIGNRMRLCAVKTLKPNVSVEQRIEFISEAEIMMNLSHVNVVNMIGVVTVDDPMCIVLEFAQHGSLKTLLPKLLRQRSANHAVNFNGVFSQIAGEVAEGMAYLSRQHIVHKDLAARNVMISNNAFGEFQAKVK* # ORIGINAL: g12383.t1 original gene structure, not modified by PASA NODE_1175_length_13381_cov_70.619 AUGUSTUS gene 195 722 . - . ID=g12383;Name=g12383.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS mRNA 195 722 . - . ID=g12383.t1;Parent=g12383;Name=g12383.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 195 722 . - . ID=g12383.t1.exon1;Parent=g12383.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 195 722 . - 0 ID=cds.g12383.t1;Parent=g12383.t1 #PROT g12383.t1 g12383 MVDYLSRGGRLTIPDLCPEAIYDIMFSCWLTNPDHRPTFDKLTAVFREIQNKGDAVDAHVCGVDVRTSAHYLIRSPPPEDHVKAAAKQSTPLSVQSEEPYFRPYLIPETHTDYDNFVFASPQKTPAKVPVEAITGIAQPAPIPRLEYLELNGHEAVSPISIYVSPTCETVHESSV* # ORIGINAL: g12385.t1 original gene structure, not modified by PASA NODE_1175_length_13381_cov_70.619 AUGUSTUS gene 11419 13168 . - . ID=g12385;Name=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS mRNA 11419 13168 . - . ID=g12385.t1;Parent=g12385;Name=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 12349 13168 . - . ID=g12385.t1.exon1;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 12349 13168 . - 0 ID=cds.g12385.t1;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 12050 12250 . - . ID=g12385.t1.exon2;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 12050 12250 . - 2 ID=cds.g12385.t1;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 11634 11842 . - . ID=g12385.t1.exon3;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 11634 11842 . - 2 ID=cds.g12385.t1;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS exon 11419 11499 . - . ID=g12385.t1.exon4;Parent=g12385.t1 NODE_1175_length_13381_cov_70.619 AUGUSTUS CDS 11419 11499 . - 0 ID=cds.g12385.t1;Parent=g12385.t1 #PROT g12385.t1 g12385 MLDSDRAFIRDSNGLHEPCVGYGGDGGARGGFYGGGSSVDTPFTSISTTFPFEGGRGGGPFGGAGGAYSSANKRCEYYDEQTPEQSGQPGSPGGYLGFGTNGENGVDSSDNVYLGSGGGGGSGGRASGVGGRIGCCGSGAGGYGGYGGAVGGRNCASGAGGGGGAVGGGAIVVIARDIVFNGFGEADGAGRAAISAGFGAGGGILLKGTKSLRIGKAARLSSLGGRSVNINDAGTTVNGGTVKLRSPVIIATGNLTTQVTAGARSVVGNVSSSEPQVDVCVAASIPSAKTLYGNNASLGFEYNTNATVLVLSRCAGVLGDKSIVCVAGTCVLTLGGNTWAVLNNDQPSLIVRGIETATNVPYLVDKSGALYSADPSAQYALKQTASASVLSSPTFVHAFTVARDTTYTWQDAFATDCRGLIATKSKAYTVVWSCDA* # PASA_UPDATE: g4778.t1, single gene model update, valid-1, status:[pasa:asmbl_8447,status:12], valid-1 NODE_606_length_20301_cov_41.3335 . gene 4770 7175 . - . ID=g4778;Name=g4778.t1 NODE_606_length_20301_cov_41.3335 . mRNA 4770 7175 . - . ID=g4778.t1;Parent=g4778;Name=g4778.t1 NODE_606_length_20301_cov_41.3335 . five_prime_UTR 7156 7175 . - . ID=g4778.t1.utr5p1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 7110 7175 . - . ID=g4778.t1.exon1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 7110 7155 . - 0 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 6882 6984 . - . ID=g4778.t1.exon2;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 6882 6984 . - 2 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 6663 6716 . - . ID=g4778.t1.exon3;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 6663 6716 . - 1 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 6316 6419 . - . ID=g4778.t1.exon4;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 6316 6419 . - 1 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 5860 6170 . - . ID=g4778.t1.exon5;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 5860 6170 . - 2 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 5526 5642 . - . ID=g4778.t1.exon6;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 5526 5642 . - 0 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 5264 5344 . - . ID=g4778.t1.exon7;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 5264 5344 . - 0 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . exon 4770 5005 . - . ID=g4778.t1.exon8;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . CDS 4865 5005 . - 0 ID=cds.g4778.t1;Parent=g4778.t1 NODE_606_length_20301_cov_41.3335 . three_prime_UTR 4770 4864 . - . ID=g4778.t1.utr3p1;Parent=g4778.t1 #PROT g4778.t1 g4778 MARSGDPRMGDILRQGVNGSIVFLGFPHDEGVRRNGGRVGARDGPAVVRRYLGRMGTVTNPEFGIEIGKWASLSDGGDVGIGLGLEAAHDALADTVEGILKLGGIPFVVGGGNDQSYPNARGLLRQCAGRSFGAVNIDAHLDVRPLNGDGQVHSGTPFRQLLCDPEFKRAHGTFAEFAAQGSQCSAEHATYVTDSGGSLHWLSALRKKESEGTPVAVQFRSLLNTLGDNVFVSFDLDAVRGADAPGVSCSSCVGLSAQEALDMCFAAGECPQVRLFDLSEFNPAIEDYRTGRLVVMMFYYFAMGVEARLRASAAATCT* # ORIGINAL: g4779.t1 original gene structure, not modified by PASA NODE_606_length_20301_cov_41.3335 AUGUSTUS gene 7775 9868 . + . ID=g4779;Name=g4779.t1 NODE_606_length_20301_cov_41.3335 AUGUSTUS mRNA 7775 9868 . + . ID=g4779.t1;Parent=g4779;Name=g4779.t1 NODE_606_length_20301_cov_41.3335 AUGUSTUS exon 7775 9868 . + . ID=g4779.t1.exon1;Parent=g4779.t1 NODE_606_length_20301_cov_41.3335 AUGUSTUS CDS 7775 9868 . + 0 ID=cds.g4779.t1;Parent=g4779.t1 #PROT g4779.t1 g4779 MAAETCLPMGDALGACTRYLRRVRAWAASSQVTRRYRRVLVAAAAVLVLVAVGASLFPTGASGASSVLSTLALSGRPWRGMTDAGTAGPSDCSKVHVAMVCAGLNTTRGVATVIKSILAHRTRPLVFHFIVDADAEFALRIMLSSWNTPSLEYDFKLLEHYQQLVSWIPSVHYSGVYGLVKLSLEAMFPKLDRLMAIDTDILFTRDIGELWSMFTRFKTKHALALVENQSDWYLGKMRVRDPWPAIGRGFNMGVMLLRLDRIRAVGWRRLWQRVAGRELEERRAIGKHPFTDLADQDVVNAVFKQQPELVLQLPCEWNLQLSKNGSFRECLDVIRGSAGLRSIGVVHWSSKLKTSQALHDTDALVAQLREAEGIDSAVIRSPDRCAKGTPDTSAELVMWPERLPEKVQEQCAPFRMSALKKRRVHPSFNGCDRHGFYAAAEATLATHTDLRNLQSIIDGLTRTWTGPISISVSATDEDAQEVLAISSVMLPHVCVHVMFDDISDPQTYPEFQLKIFAISMVLTPYVVVVDGVPINEAPWRMLDQAAVFGARFLASKSNNAAVILPTFSCNSECHYVTRDGLRNSLAKGVLSQPLNSDMDYAKFLSGEVMPYGILFTRPFQAAAVLRVPLPIDIANACEYDGAGFSQLELLRSLSTRDYNFFVATDYHVISRDIAGDFALESCFVHVSAFREQKKWKG* # PASA_UPDATE: g4777.t1, single gene model update, valid-1, status:[pasa:asmbl_8452,status:3], valid-1 NODE_606_length_20301_cov_41.3335 . gene 3395 4759 . + . ID=g4777;Name=g4777.t1 NODE_606_length_20301_cov_41.3335 . mRNA 3395 4759 . + . ID=g4777.t1;Parent=g4777;Name=g4777.t1 NODE_606_length_20301_cov_41.3335 . five_prime_UTR 3395 3468 . + . ID=g4777.t1.utr5p1;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . five_prime_UTR 3612 3617 . + . ID=g4777.t1.utr5p2;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . exon 3395 3468 . + . ID=g4777.t1.exon1;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . exon 3612 3884 . + . ID=g4777.t1.exon2;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . CDS 3618 3884 . + 0 ID=cds.g4777.t1;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . exon 4312 4759 . + . ID=g4777.t1.exon3;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . CDS 4312 4509 . + 0 ID=cds.g4777.t1;Parent=g4777.t1 NODE_606_length_20301_cov_41.3335 . three_prime_UTR 4510 4759 . + . ID=g4777.t1.utr3p1;Parent=g4777.t1 #PROT g4777.t1 g4777 MEDQEFDNADSGASKTFPMQCSALRKNGFVVIKDRPCRIVEMSTSKTGKHGHAKVHLVAIDIFTGKKYEDLSPSTHNMDVPNVGRKDYQLIDIDSGFLNLMNDAGETKCDLRLPEGEIGDEIKQKFESGEDFLVTVLSAMGEEAAIACKAMAAK* # PASA_UPDATE: g4780.t1, single gene model update, valid-1, status:[pasa:asmbl_8448,status:12],[pasa:asmbl_8449,status:12], valid-1 NODE_606_length_20301_cov_41.3335 . gene 10207 19535 . - . ID=g4780;Name=g4780.t1 NODE_606_length_20301_cov_41.3335 . mRNA 10207 19535 . - . ID=g4780.t1;Parent=g4780;Name=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 19474 19535 . - . ID=g4780.t1.exon1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 19474 19535 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 19122 19167 . - . ID=g4780.t1.exon2;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 19122 19167 . - 1 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 18856 18985 . - . ID=g4780.t1.exon3;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 18856 18985 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 18609 18734 . - . ID=g4780.t1.exon4;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 18609 18734 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 18189 18403 . - . ID=g4780.t1.exon5;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 18189 18403 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 17864 18061 . - . ID=g4780.t1.exon6;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 17864 18061 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 17502 17706 . - . ID=g4780.t1.exon7;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 17502 17706 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 17256 17358 . - . ID=g4780.t1.exon8;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 17256 17358 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 16929 17122 . - . ID=g4780.t1.exon9;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 16929 17122 . - 1 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 11670 16792 . - . ID=g4780.t1.exon10;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 11670 16792 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 11308 11463 . - . ID=g4780.t1.exon11;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 11308 11463 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 10957 11221 . - . ID=g4780.t1.exon12;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 10957 11221 . - 0 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 10763 10840 . - . ID=g4780.t1.exon13;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 10763 10840 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 10572 10652 . - . ID=g4780.t1.exon14;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 10572 10652 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 10377 10482 . - . ID=g4780.t1.exon15;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 10377 10482 . - 2 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . exon 10207 10280 . - . ID=g4780.t1.exon16;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . CDS 10265 10280 . - 1 ID=cds.g4780.t1;Parent=g4780.t1 NODE_606_length_20301_cov_41.3335 . three_prime_UTR 10207 10264 . - . ID=g4780.t1.utr3p1;Parent=g4780.t1 #PROT g4780.t1 g4780 MTTETKAIPALNKLIAELKSKSEDVRAKSAKDLRLYVSSVGREMSGENFTKFMNTVDRRIYELVHSSDPSEKMGGIVAIDELIDIDGEENATKITRFANYLRIVLPGTGDPAVMTMAAKALGHLALAGGALTADFVEFEVRRAYEWLEGDRNEARRHAAVLVLVELATNAPTLFYGHVAQFFETIWVAIRDPKLAIREGAIHALRACLALTAQRESRIRSQWARKVYEETQKGFKTNKDDGIHGSLLTVGELLRHADEEFVFGKFEEACDTVLRYRDNKNPLIQRSVIVLLPSLAQFRRDDFVESAHMKTAMNFLLSMLRRERERLPAFTSIGQMALAVGVDINPYLDGILVNIKDSLGVKGKKTQVVEAPVFACIAMLAQALGPAFSKHAQELLESMFNVGLSPPLTEALHDLARYIPSLLPDIQTRLLDMLSITLARQAFRVPGTPRGSVARPSSTGRTLAPVVGGPQGVAVGGEGIDIATITLALRSLGSFDFSNHVLTNFVRESVVRYLEDENPLVRREAALTCAQLLGRSNERAMGGDKGAPRSIHSAAVVSEVLEKLLGVGITDPDASIRLSVLSSLDQRFDNHLAQAENLRSLFIALNDEEFRIRELAVAIIGRLTSLNPAYVMPSLRKTLIQLLTELEFSGVARNKEEAARLLAQLISHAPRLIKPYVDPVLRALKSKLRDQSPGVATNVLAALGELAQVGAEDMARHVNDLLPLIIETLQDQSSVSKREVALRTLGQLAEGTGYVVEPYLQYPKLLHVLLNFLKTEQQPSLRREVIKVLGILGALDPYKHKLSQTALRDNEANFDHSRVGIAAGPVVVAPTGPSNEEYYPTVAIAALMRILRDPTLAVHHTMVIQAVMFIFKSLGLKCVPFLPQIMPPFLHVMRSCEPSFREFLFQQLGGLVSIVKQHIRNYLSEIFVLVQDYWDVNNPIQITIMSLVEAVSIALGGEFKVYLPELVPQILRVFMRDTSERRTPTLKVLHALEVFGANLDDFIHLVIPPVVKLFEATDTPMDVRGTAIQTVGRLCRKLNFSDHASRIIHPLTRVLESTPELRSSALDALCALVFQLGADYAIFVPLVGQVLGRQRIQHARYDVLVTKVLKNQPLPVEDGAGEDRGGRAPALGGEDGGIEAGTIKKLHVHQVNLKRAWEASQRSTKEDWIEWIRRFSVELLRESPSPALRSCSALANVYHPLARELFNAAFMSCWTELYEQYQEELVRSLETALLSPNIPAEILQTLLNLAEYMEHDDKALPIDTGTLGEYASRCHAYAKALHYKEIEFYSSQSAETIESLISINNQLQQPEAAAGILTYAQQNHDLELTIHESWYEKLQQWDEALEVYDRKQREDPLNMALAVGRMRCLHALGNWADLHVLAQDKWRVADELTRHTIAPMAAAAAWGLGRWDAMDDYLGAMGKDMQEGAFFRAILAVHRNQFGVAQQQIDAARDILDAELTALAGESYNRAYGVMVRVQMLSELEEIVRIKCSPDRAAVLASVRQTWMTRLRGCQRNVEVWQRVLEVRSLVIPPQQEKDMWLKFASLCRKSGRQALARKTLVGLLGLDPAEGDGGLARLHMAHPRVAFAYMKHMAFNGEMGAAHSLLKDFVRASVPAAPTTPDFDGRAKARLLARCHLKLGEWHAALQDTLTDDAIPLILDAYAQATQLDHGWYKAWHAWALMNFEAVGYYEKSGGREDRMRAHLAPALQGFFRSIALLRGNSLQDTLRLLTLWFKYGYLVEVNDAVVEGIKTVSIDTWLQVIPQLIARIHTPSAMVGRLIHQLLADIGRQHPQALIYPLTVASKSQSVPRRSAALSIMDTMRLHSAVLVEQALLVSEELIRVAILWHEMWHEGLEEASRLYFGEHNIEGMFAKLEPLHQRLEKGPETLREISFNQAFGRDLHEAHEWCKKYQRSGVINDVHQAWELYYLVFRRISKQLPQLTSLELQYVSPKLLAARDLELAVPGTYRSGEPAIRIASFVPQLNVISSKQRPRKLTVKGSDGLDYVYLLKGHEDLRQDERVMQLFGLVNTLLAADPETFKRHLSIQRYSVIPLSPNSGLIGWVPHCDTLHALIRDYRESRKILLNIEHRLMLQMAPDYDNLTLVQKVEVFRHALHNTTGQDLYKVLWLKSVNSESWLDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRFSGKILHIDFGDCFEVAMHREKFPERIPFRLTRMLINAMEVSGIEGNYRMTCESVMRVLRENKDSLMAVLEAFVYDPLINWRLIEGTGKTVPKKKGVIDSNAAEMLEEGAAPFGARQKPRSESELLHSMESMGENKPEVLNERAVTVIARVQAKLTGRDFAPNETLDVPTQVQRLIRQATSHENLCQCYIGWCPFW* # PASA_UPDATE: g4776.t1, single gene model update, valid-1, status:[pasa:asmbl_8451,status:12], valid-1 NODE_606_length_20301_cov_41.3335 . gene 163 2569 . + . ID=g4776;Name=g4776.t1 NODE_606_length_20301_cov_41.3335 . mRNA 163 2569 . + . ID=g4776.t1;Parent=g4776;Name=g4776.t1 NODE_606_length_20301_cov_41.3335 . five_prime_UTR 163 164 . + . ID=g4776.t1.utr5p1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 163 239 . + . ID=g4776.t1.exon1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 165 239 . + 0 ID=cds.g4776.t1;Parent=g4776.t1;5_prime_partial=true NODE_606_length_20301_cov_41.3335 . exon 321 438 . + . ID=g4776.t1.exon2;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 321 438 . + 0 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 705 765 . + . ID=g4776.t1.exon3;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 705 765 . + 2 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 854 932 . + . ID=g4776.t1.exon4;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 854 932 . + 1 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 1046 1131 . + . ID=g4776.t1.exon5;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 1046 1131 . + 0 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 1236 1333 . + . ID=g4776.t1.exon6;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 1236 1333 . + 1 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 1522 1653 . + . ID=g4776.t1.exon7;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 1522 1653 . + 2 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 1770 1845 . + . ID=g4776.t1.exon8;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 1770 1845 . + 2 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 2043 2340 . + . ID=g4776.t1.exon9;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 2043 2340 . + 1 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . exon 2428 2569 . + . ID=g4776.t1.exon10;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . CDS 2428 2496 . + 0 ID=cds.g4776.t1;Parent=g4776.t1 NODE_606_length_20301_cov_41.3335 . three_prime_UTR 2497 2569 . + . ID=g4776.t1.utr3p1;Parent=g4776.t1 #PROT g4776.t1 g4776 EAEIDSIAAATDETGRVHIAVAFRKPLPPTGHDSPLHHYIGVFRSVVVPAGDGCAGVDKWFASAGPATHTIIDVAYAPLQVSMARAVASTGELRMRLVATGADGKVHEYWEDYSRGDTTLSYVEAPSASWGKGFGGLSSCSLNVDTITSANVEYAAVGCQSGQLRLSVAEGTDASQYSAWYDAPICSIHFFTTGDSMRPVSSRAPFAERLRTTADEVHRAGTESPLVHLAVASALGPAVVYWNVGREGLSMPTYLPHSDTHDVTLCVRSADCELAGRADLLVGSWGGALTCYRLDHVTPLQWNAAWQREFAHPVMAVAPCTACDGTPGLAVLTRESLHVMQLPAEAVASRVGELLSYMSVCSG* # PASA_UPDATE: g204.t1, single gene model update, valid-1, status:[pasa:asmbl_5279,status:3], valid-1 NODE_2943_length_4671_cov_51.2337 . gene 763 3940 . + . ID=g204;Name=g204.t1 NODE_2943_length_4671_cov_51.2337 . mRNA 763 3940 . + . ID=g204.t1;Parent=g204;Name=g204.t1 NODE_2943_length_4671_cov_51.2337 . five_prime_UTR 763 800 . + . ID=g204.t1.utr5p1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 763 891 . + . ID=g204.t1.exon1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 801 891 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 1113 1156 . + . ID=g204.t1.exon2;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 1113 1156 . + 2 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 1266 1401 . + . ID=g204.t1.exon3;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 1266 1401 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 1519 1655 . + . ID=g204.t1.exon4;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 1519 1655 . + 2 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 2145 2252 . + . ID=g204.t1.exon5;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 2145 2252 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 2477 2570 . + . ID=g204.t1.exon6;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 2477 2570 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 2720 2856 . + . ID=g204.t1.exon7;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 2720 2856 . + 2 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 3031 3099 . + . ID=g204.t1.exon8;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 3031 3099 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 3309 3452 . + . ID=g204.t1.exon9;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 3309 3452 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 3575 3727 . + . ID=g204.t1.exon10;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 3575 3727 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . exon 3848 3940 . + . ID=g204.t1.exon11;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . CDS 3848 3904 . + 0 ID=cds.g204.t1;Parent=g204.t1 NODE_2943_length_4671_cov_51.2337 . three_prime_UTR 3905 3940 . + . ID=g204.t1.utr3p1;Parent=g204.t1 #PROT g204.t1 g204 MATEGEPPVALAAGTPKHPLVISVAEPERHGEGISAFVTYNVHTETTLPLYRAPEMTVRRRFRNFLWLYEQLIETYPGTIVHPPPKKNFMGKFASEESGFVERRRLELERFLQRLAVHPTLRDSPALRNFLESKDDLPEPAGAAHASPPSMMKIARAITGAHAHLQKSQEDEWFDLRLQQAEELEAQLRQLYKSFEGLCDRQRALVNANGALSTTAAALSKSEDSVMLAKILARFSEVEKGLADVAAAELRAGQADVGSLVSDYLLLLSAVRVIFVQRKRAQQACADAFAELQRRRENEQRLRSGGKIDKLAAAEQLIHEGDDKYTQAQAHFEAISARIRSEVHRFDREKVTEFKAGIAAYVSAMIDAQAEVIKLWEGFIPDLDAVSAT* # ORIGINAL: g203.t1 original gene structure, not modified by PASA NODE_2943_length_4671_cov_51.2337 AUGUSTUS gene 154 499 . - . ID=g203;Name=g203.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS mRNA 154 499 . - . ID=g203.t1;Parent=g203;Name=g203.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS exon 391 499 . - . ID=g203.t1.exon1;Parent=g203.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS CDS 391 499 . - 0 ID=cds.g203.t1;Parent=g203.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS exon 154 281 . - . ID=g203.t1.exon2;Parent=g203.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS CDS 154 281 . - 2 ID=cds.g203.t1;Parent=g203.t1 #PROT g203.t1 g203 MALLSLTPFAAIAETAEGFRGRIDDLKNLIALRNCSDNGALHTNEYLVNLTVLVSELESQAAMLASMLAAERAALANAE # ORIGINAL: g205.t1 original gene structure, not modified by PASA NODE_2943_length_4671_cov_51.2337 AUGUSTUS gene 4001 4638 . - . ID=g205;Name=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS mRNA 4001 4638 . - . ID=g205.t1;Parent=g205;Name=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS exon 4543 4638 . - . ID=g205.t1.exon1;Parent=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS CDS 4543 4638 . - 1 ID=cds.g205.t1;Parent=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS exon 4324 4385 . - . ID=g205.t1.exon2;Parent=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS CDS 4324 4385 . - 1 ID=cds.g205.t1;Parent=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS exon 4001 4209 . - . ID=g205.t1.exon3;Parent=g205.t1 NODE_2943_length_4671_cov_51.2337 AUGUSTUS CDS 4001 4209 . - 2 ID=cds.g205.t1;Parent=g205.t1 #PROT g205.t1 g205 TIADALIQGVPTKVPFPSIFGTGVTRDGLISRPASLGGKPATGTPGTPKDSSVESVSSLSGFSTGSSLHGLLLALKEGLAKVHIREHFELTDAGYTGDDHSEVIEAITMWEERYSPNQQFE* # PASA_UPDATE: g10865.t1, single gene model update, valid-1, status:[pasa:asmbl_806,status:12], valid-1 NODE_1208_length_13002_cov_40.8227 . gene 6787 12661 . - . ID=g10865;Name=g10865.t1 NODE_1208_length_13002_cov_40.8227 . mRNA 6787 12661 . - . ID=g10865.t1;Parent=g10865;Name=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 12502 12661 . - . ID=g10865.t1.exon1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 12502 12661 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 12091 12298 . - . ID=g10865.t1.exon2;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 12091 12298 . - 2 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 11672 11818 . - . ID=g10865.t1.exon3;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 11672 11818 . - 1 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 11376 11497 . - . ID=g10865.t1.exon4;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 11376 11497 . - 1 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 11051 11133 . - . ID=g10865.t1.exon5;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 11051 11133 . - 2 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 9363 10835 . - . ID=g10865.t1.exon6;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 9363 10835 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 9064 9146 . - . ID=g10865.t1.exon7;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 9064 9146 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 8759 8861 . - . ID=g10865.t1.exon8;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 8759 8861 . - 1 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 8362 8594 . - . ID=g10865.t1.exon9;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 8362 8594 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 7670 7823 . - . ID=g10865.t1.exon10;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 7670 7823 . - 1 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 7302 7409 . - . ID=g10865.t1.exon11;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 7302 7409 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . exon 6787 7165 . - . ID=g10865.t1.exon12;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . CDS 7070 7165 . - 0 ID=cds.g10865.t1;Parent=g10865.t1 NODE_1208_length_13002_cov_40.8227 . three_prime_UTR 6787 7069 . - . ID=g10865.t1.utr3p1;Parent=g10865.t1 #PROT g10865.t1 g10865 MDGSLYDEFGNYIGPELPDENDSDAEDESDRRPSGWQQQEEPDADGVMPMDAEVEDSSTRYAIVLHEDKKYYPTASEVYGEDVEALVQEEDTQGLDEPIIAPQKKKKFAASEKDLPETTFSKEFLADLLETPSLMRNVVLLGHLHSGKTTFMDMLVAHTHDKSWVTLENDVRYTDTLDTEQARALSIKSTPMSLVMPDIRGKSYLLNLIDTPGHVNFSDEQTAAVRLCDGAVIFVDAIEGVMLGTERVLKHALQEGLAVTVCVNKIDRLILELKLPPADAYHKLRHTIDEINSIISTHAPPKMNKDGTPAPPPYVSPLLGNVCFASANYGCSFTLSSFAKIYAETHSNAFPADEFAKRLWGDIYFDAKTRKFGKRPPSGVADAKRTFVQFILEPLYKLFAQVVGDVETTLPDTLFELGISLKKTELDMNIRPLLRLVCSRFFGGADGFVDLVARHVPSPAVGADRLVRHVYTGPMNSDVAIAMLKCDPKGPLMVHVTKLLPSTDGMSFNAFGRVMSGTVRVGDRVRVLGENYSLDDDEDMRVAEVSGVFIGEARYAIPLQAVPAGGLVLLGGIDASIVKTATIAQLEDADDAVIFRPLRFNTVSVVRVAVEPVNPTELPKMLDGLRKVNKTYPLLQTRVEESGEHVVIGTGELYMDCVLHDLRKMYSEIDIKVSDPVVSFNETVVETSALKCFAETPNKRNKLTMISEPLDNGLAADIEAGNVSLSWPKKKVGEFFTHKYGWDVLAARSVWAFGPDNNGPNVLLDDTLSTVDKPLLASVRDSIVQGFQWASREGPLCEEPMRNVKMRILDASIAPEPIHRGGGQVIPTARRVAYSGFLMATPRLMEPYFFVEVTAPADCVAAIYTVLSRRRGHVVQDMPKAGSPLYVVKALIPAMDSFGFETDLRTHTQGQAFALSVFDHWQIVPGDPLDRSVILRPLEPQPPQFLAREFMVKTRRRKGLSEDVSIGKFFDDPMLLELAKQDIAINYAF* # PASA_UPDATE: g10864.t1, single gene model update, valid-1, status:[pasa:asmbl_807,status:3], valid-1 NODE_1208_length_13002_cov_40.8227 . gene 5650 6671 . + . ID=g10864;Name=g10864.t1 NODE_1208_length_13002_cov_40.8227 . mRNA 5650 6671 . + . ID=g10864.t1;Parent=g10864;Name=g10864.t1 NODE_1208_length_13002_cov_40.8227 . five_prime_UTR 5650 5828 . + . ID=g10864.t1.utr5p1;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . exon 5650 5892 . + . ID=g10864.t1.exon1;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . CDS 5829 5892 . + 0 ID=cds.g10864.t1;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . exon 6095 6345 . + . ID=g10864.t1.exon2;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . CDS 6095 6345 . + 2 ID=cds.g10864.t1;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . exon 6504 6671 . + . ID=g10864.t1.exon3;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . CDS 6504 6605 . + 0 ID=cds.g10864.t1;Parent=g10864.t1 NODE_1208_length_13002_cov_40.8227 . three_prime_UTR 6606 6671 . + . ID=g10864.t1.utr3p1;Parent=g10864.t1 #PROT g10864.t1 g10864 MTLPRLFTAAILLIGLGLAIEAAVCSNPASYAGQSLCYPDGQYCGECVSFVKVCSKDTRTTSQWSAGQRVHGANLPSGTTIATFPSGSYSGHAAVYVGQNADGIQVWDQWVGHPVSQRTIRWNGTGISNNGDSFFAIN* # ORIGINAL: g10863.t1 original gene structure, not modified by PASA NODE_1208_length_13002_cov_40.8227 AUGUSTUS gene 489 4484 . + . ID=g10863;Name=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS mRNA 489 4484 . + . ID=g10863.t1;Parent=g10863;Name=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS exon 489 1298 . + . ID=g10863.t1.exon1;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS CDS 489 1298 . + 0 ID=cds.g10863.t1;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS exon 1592 1900 . + . ID=g10863.t1.exon2;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS CDS 1592 1900 . + 0 ID=cds.g10863.t1;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS exon 2384 2528 . + . ID=g10863.t1.exon3;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS CDS 2384 2528 . + 0 ID=cds.g10863.t1;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS exon 2914 4484 . + . ID=g10863.t1.exon4;Parent=g10863.t1 NODE_1208_length_13002_cov_40.8227 AUGUSTUS CDS 2914 4484 . + 2 ID=cds.g10863.t1;Parent=g10863.t1 #PROT g10863.t1 g10863 MSRLLRGLFSRGNDDREDLQWLHHEDGDAMELLSAASRSGNSVVDVHPDTFGYEDRREVRLARESDMQIGGDGSQLLPTLSANALDAIDKKRSDSLRDDMSQYSDGSEVSGYGKGSDSRPFIKPLPQGRTRRRVLKGLFVGAAVVVAVMLGIVIWEFASLLALRDATFAVEYVSVPSLCHVNGIPVDLALTSSIKLPMRVNIEILRGCVVRNGASVVCVTMPSVAFDSRMEVTGAFVTIVDADAAARALALDASDDDLRGWTLMVKAALQPRAPLRLSITREFTFDIDMSFVRNWVAFGRNTNSSSSCGPSSPSSSQTSWWMNVAELSLDTFSATIGLTSCDLKLPVRVRFPPLLVAITHGSGAQAGLVVINQELFSSDDSKCNATFTANRAVGHVDGLRRVARDLVGGRLYVGCVIAQTEEQCSMDAGLLRAVNRILSSIVVDVDIDIPFIQSDVQSRSALMRDIITGDNCSNSSSSSNNNNNTDTHSMYFSVDRIREVGLTPSSARDILNGKIVYDFNRDLPILSRGAYFPRLSVRVHALASSAPSLRRDSEDNATSDAVADIVFDVLDAPVAGRQRFTMTVLGAVLDREALETNVLGPLINGNAAVSLVLEILNETALERRTILHDAVAGLMLRVVPVKTPRGLVTAAGVRTALEQVYALVSGSTPSGIIAGMSRSVGGLDFLSLPTINLPQPVSIALLCAPTVQCGVVRVTWKRSFFIVSHSLEGSLAMWHPEQESRARDGDGGYYAWWADDVPKVSMAVPTLAYTRPLHVTALDALVSSIANARPTNGAFLHLATHGFEVRVPYNFEAFVSTSAVAQPVAFPSCQRMQSTNKTTALFALRNDVSLSVDVDASVSLVSLESRGTNAGSSTEEYSCVTPGRQSVPSGSTVGVALGCNINALSEGPYAIAGGNITARLDRMELQIAMDPSSKPFVCSWIGND* # ORIGINAL: g3106.t1 original gene structure, not modified by PASA NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS gene 2 970 . + . ID=g3106;Name=g3106.t1 NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS mRNA 2 970 . + . ID=g3106.t1;Parent=g3106;Name=g3106.t1 NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS exon 2 265 . + . ID=g3106.t1.exon1;Parent=g3106.t1 NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS CDS 2 265 . + 2 ID=cds.g3106.t1;Parent=g3106.t1 NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS exon 411 970 . + . ID=g3106.t1.exon2;Parent=g3106.t1 NODE_4549_length_1473_cov_133.124_potentialcontaminant AUGUSTUS CDS 411 970 . + 2 ID=cds.g3106.t1;Parent=g3106.t1 #PROT g3106.t1 g3106 EPTVIVSLRMSVIVNDVDQMTVRIVGTNSSQINMWTPTFTPDNQEFQFSLANDPSALFPASLIEVTLSNPSYNLSALRIVELTANSFVAVKYMPILKFDLSPLLSVQRSFVKERRIAITDSRISATTLDASGNPTIISPNGIAIHNVTSQNSVASFTVNGDSGFASLRTASPVASDGLLWWPRVDGFRPVGSSLSLTKLTCDGPSGTTATECGDVDWVTDAPTLSNTILSWLSMPGGIGYLAMELLPTAGVPSTWLNVSAPPMLVFEYQGTFC* # ORIGINAL: g5088.t1 original gene structure, not modified by PASA NODE_984_length_15081_cov_42.2772 AUGUSTUS gene 9382 13974 . + . ID=g5088;Name=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS mRNA 9382 13974 . + . ID=g5088.t1;Parent=g5088;Name=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 9382 11197 . + . ID=g5088.t1.exon1;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 9382 11197 . + 0 ID=cds.g5088.t1;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 11392 11659 . + . ID=g5088.t1.exon2;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 11392 11659 . + 2 ID=cds.g5088.t1;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 12503 12743 . + . ID=g5088.t1.exon3;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 12503 12743 . + 1 ID=cds.g5088.t1;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 12842 13561 . + . ID=g5088.t1.exon4;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 12842 13561 . + 0 ID=cds.g5088.t1;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 13762 13974 . + . ID=g5088.t1.exon5;Parent=g5088.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 13762 13974 . + 0 ID=cds.g5088.t1;Parent=g5088.t1 #PROT g5088.t1 g5088 MKRIFGRNFVLRRTIRSGFGRVVATLMLIFLAAACFAALSSHTWEAPTFAFQVLSAEEDPLDALRHSIPETQEDSIVFNLKDAAQKHAVHAEKVRGAEGEITHFHDRDAGERTAKVQKNEPDGAVWFAKVVPGELEEIFPEWAETEDIIDDRAALKIAIMEAPPPKPPTPTNKTQTQPRMTAISASPNSSPVPKSSGAPKPTPLSADARPEKGDGTRTGSLQIGNKPNVSVLLTISSPFDVDLDPAITPAEYKLSEIRLRDGSVYSVANNDFDLHGTAWMREWFATSPLEQAVMGAVQDVLLARQSRIRNLYERKQRIGAEAIINEEVAAERQRLASSSAQRRGAGSTEVEALLDRVRQRSTADVHLFGKSDIVLDVGANSGIFGLMASALSFPVVLFEPNPMCARDARIAIRESKLDDLSVVLQLAVSANTSANVYKMAVTGVCRSAMVLDDRLPLSGGKSGPKDVEELASAGLSLGKLSLGTIRDRILGATFDNLREEEKRVALRKLGIENTDGSSVDWKVTVAAKLPLWAAEVSTVSLDDVLFEKPVEGAIESTAKISSIMSQPPTFPPVVVLAKIDIEGHEPLALAGLRESVRAGIVRNIIVEFTPSYWRRYDLKRKVVARMVADLCAEGDYYVSILHPRRILGVKAVSPSADYPEAIDARLELYMFLVLELAGQTDVWFSHDVAPGGAQSTCPLSSMMDEVHPMYSYFMDSAGGTVAAPIPVRAGIVAGLERLRLATCNGIFQPAFIADMLSGNIPAGVVDVSTIPLPDIAFQWRFESLVNSDIAALYDGCLLAVNQESVELSLRHDVLKLVNFFGVLFKVWSFVKKSFAAIALSDAAAAIPGDDWGLKIDYAENGPAFPSPRENKYTIFCSSKNWLDFDLGGAKVEWRGIVSAAVDKSSDGGCSLRYTARARHETDDQDDDDDELGALFDYEFGDGGDSGAAVHNATGATIGRFDSAIGREAVSLQGVICASDECLSASTLKRRIISGFRSKGTPVFVDILPHTRTERAICVRHDMRRKGVGRELLGLVEAFVKAMWQTGGRRVVLMISFIVEDGHDFFKRMGYQFPEIWDEAEKTLVR* # ORIGINAL: g5086.t1 original gene structure, not modified by PASA NODE_984_length_15081_cov_42.2772 AUGUSTUS gene 2602 6534 . + . ID=g5086;Name=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS mRNA 2602 6534 . + . ID=g5086.t1;Parent=g5086;Name=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 2602 2954 . + . ID=g5086.t1.exon1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 2602 2954 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 3247 3352 . + . ID=g5086.t1.exon2;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 3247 3352 . + 1 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 3501 3584 . + . ID=g5086.t1.exon3;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 3501 3584 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 3958 4165 . + . ID=g5086.t1.exon4;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 3958 4165 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 4500 4597 . + . ID=g5086.t1.exon5;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 4500 4597 . + 2 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 5049 5185 . + . ID=g5086.t1.exon6;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 5049 5185 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 5451 5661 . + . ID=g5086.t1.exon7;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 5451 5661 . + 1 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 5766 5864 . + . ID=g5086.t1.exon8;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 5766 5864 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS exon 6145 6534 . + . ID=g5086.t1.exon9;Parent=g5086.t1 NODE_984_length_15081_cov_42.2772 AUGUSTUS CDS 6145 6534 . + 0 ID=cds.g5086.t1;Parent=g5086.t1 #PROT g5086.t1 g5086 MLLTKSVKSMVKYSIKTIARKPTGKQKRFSWERFRLEMKLKLRQNKNPLLVCLAVLLGGCLYYAAVEPDGDCKHFFLVAAGIRAPKTDADFSGLYQLAWPIFLEVIIFGFVAAALLDRYNPVMMSRVLAETLSGHTVVVGNQHVGQRIVDFLQAEHRQYVVVEEDKTLVDDLLADSEPVVLGSVTELGNLKAASVERCREVFVLVNDLQRAIIICYHLRTLNKTCPIYVQLFEHQDFKDYFTNEPFNAFTFSTSEWAAQSLGQWIDPSTMGGCVVFGSGHCAQRFVHYIATRTGRNVYVVDEKIESKFAELGLNATVTGSANQAPMRLRTRSQSIDIRDAISTGTVHLISITRCGMQRVDNHVPFGGITHVFVCWGVKDRFLDTLYIMMRLQKTHPNVQVFVRVFDEELGTIVEGMGGHVFSTSNTAFSMLQDQLPESSNIKRRGPALAKSTSIPGADASSPDNADNLTRIRLREALERLNRDDEFHPDVALGTASRGSGMSFTASASTPPAPDAPCASHVSASRGSTGLHQADGCAPPPVPATRDAAPDDSSHASKPKSE* # PASA_UPDATE: g5087.t1, single gene model update, valid-1, status:[pasa:asmbl_10226,status:3], valid-1 # PASA_UPDATE: g5087.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_10225,status:3], valid-1 NODE_984_length_15081_cov_42.2772 . gene 7081 8660 . - . ID=g5087;Name=g5087.t1 NODE_984_length_15081_cov_42.2772 . mRNA 7081 8660 . - . ID=g5087.t1;Parent=g5087;Name=g5087.t1 NODE_984_length_15081_cov_42.2772 . five_prime_UTR 8446 8660 . - . ID=g5087.t1.utr5p1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . exon 8428 8660 . - . ID=g5087.t1.exon1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . CDS 8428 8445 . - 0 ID=cds.g5087.t1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . exon 8246 8345 . - . ID=g5087.t1.exon2;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . CDS 8246 8345 . - 0 ID=cds.g5087.t1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . exon 7958 8151 . - . ID=g5087.t1.exon3;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . CDS 7958 8151 . - 2 ID=cds.g5087.t1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . exon 7646 7707 . - . ID=g5087.t1.exon4;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . CDS 7646 7707 . - 0 ID=cds.g5087.t1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . exon 7081 7349 . - . ID=g5087.t1.exon5;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . CDS 7202 7349 . - 1 ID=cds.g5087.t1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . three_prime_UTR 7081 7201 . - . ID=g5087.t1.utr3p1;Parent=g5087.t1 NODE_984_length_15081_cov_42.2772 . mRNA 7081 8660 . - . ID=g5087.t1.1.5b6be70c;Parent=g5087;Name=g5087.t1 NODE_984_length_15081_cov_42.2772 . five_prime_UTR 8428 8660 . - . ID=g5087.t1.1.5b6be70c.utr5p1;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . five_prime_UTR 8165 8345 . - . ID=g5087.t1.1.5b6be70c.utr5p2;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . exon 8428 8660 . - . ID=g5087.t1.1.5b6be70c.exon1;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . exon 7958 8345 . - . ID=g5087.t1.1.5b6be70c.exon2;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . CDS 7958 8164 . - 0 ID=cds.g5087.t1.1.5b6be70c;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . exon 7646 7707 . - . ID=g5087.t1.1.5b6be70c.exon3;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . CDS 7646 7707 . - 0 ID=cds.g5087.t1.1.5b6be70c;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . exon 7081 7349 . - . ID=g5087.t1.1.5b6be70c.exon4;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . CDS 7202 7349 . - 1 ID=cds.g5087.t1.1.5b6be70c;Parent=g5087.t1.1.5b6be70c NODE_984_length_15081_cov_42.2772 . three_prime_UTR 7081 7201 . - . ID=g5087.t1.1.5b6be70c.utr3p1;Parent=g5087.t1.1.5b6be70c #PROT g5087.t1 g5087 MKPHTQTLFASSLLDTFDKDRLASLGLVIRPLERDDYGKGFLDLLSQLTKVGDVSEERFTAQFEAMIAAKDTYYVVVIEDPALNRLVACATLVVELKFIHGASKRGHIEDVVVDEQQRGRQLGKIIIEALKCVGEATGCYKVTLDCKKDRVGFYEKCGFSNEEICFLTKRFFD* #PROT g5087.t1.1.5b6be70c g5087 MCCPGFLDLLSQLTKVGDVSEERFTAQFEAMIAAKDTYYVVVIEDPALNRLVACATLVVELKFIHGASKRGHIEDVVVDEQQRGRQLGKIIIEALKCVGEATGCYKVTLDCKKDRVGFYEKCGFSNEEICFLTKRFFD* # PASA_UPDATE: g5085.t1, single gene model update, valid-1, status:[pasa:asmbl_10224,status:12],[pasa:asmbl_10227,status:12], valid-1 NODE_984_length_15081_cov_42.2772 . gene 189 1794 . + . ID=g5085;Name=g5085.t1 NODE_984_length_15081_cov_42.2772 . mRNA 189 1794 . + . ID=g5085.t1;Parent=g5085;Name=g5085.t1 NODE_984_length_15081_cov_42.2772 . five_prime_UTR 189 189 . + . ID=g5085.t1.utr5p1;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . exon 189 306 . + . ID=g5085.t1.exon1;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . CDS 190 306 . + 0 ID=cds.g5085.t1;Parent=g5085.t1;5_prime_partial=true NODE_984_length_15081_cov_42.2772 . exon 560 666 . + . ID=g5085.t1.exon2;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . CDS 560 666 . + 0 ID=cds.g5085.t1;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . exon 833 1022 . + . ID=g5085.t1.exon3;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . CDS 833 1022 . + 1 ID=cds.g5085.t1;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . exon 1352 1794 . + . ID=g5085.t1.exon4;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . CDS 1352 1600 . + 0 ID=cds.g5085.t1;Parent=g5085.t1 NODE_984_length_15081_cov_42.2772 . three_prime_UTR 1601 1794 . + . ID=g5085.t1.utr3p1;Parent=g5085.t1 #PROT g5085.t1 g5085 IRVLVTGNESGLIETVPNALSLHSIKKQTTGSLLDYFHEEFGDDCDERFLTARRNFVESLAGYSLVCYFLQLKDRHNGNILLDADGHILHIDFGFFLSNSPRNLGFESAPFKLTHEFVAAMGGPTSDMFAYFKVLLLQGLIAARKHLDRVMMLVEVMAQGSRLPCFVAGHDTMRTLSERFHVGFTDEQLAQFVDAMVDNAMASLSTRLYDNFQYYTNGIL* # PASA_UPDATE: g10601.t1, single gene model update, valid-1, status:[pasa:asmbl_3778,status:12], valid-1 NODE_2211_length_7249_cov_43.5209 . gene 88 2878 . - . ID=g10601;Name=g10601.t1 NODE_2211_length_7249_cov_43.5209 . mRNA 88 2878 . - . ID=g10601.t1;Parent=g10601;Name=g10601.t1 NODE_2211_length_7249_cov_43.5209 . five_prime_UTR 2828 2878 . - . ID=g10601.t1.utr5p1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 2735 2878 . - . ID=g10601.t1.exon1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 2735 2827 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 2475 2570 . - . ID=g10601.t1.exon2;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 2475 2570 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 2284 2329 . - . ID=g10601.t1.exon3;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 2284 2329 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 2076 2137 . - . ID=g10601.t1.exon4;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 2076 2137 . - 2 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 1596 1892 . - . ID=g10601.t1.exon5;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 1596 1892 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 1158 1282 . - . ID=g10601.t1.exon6;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 1158 1282 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 694 907 . - . ID=g10601.t1.exon7;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 694 907 . - 1 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 484 529 . - . ID=g10601.t1.exon8;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 484 529 . - 0 ID=cds.g10601.t1;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . exon 88 186 . - . ID=g10601.t1.exon9;Parent=g10601.t1 NODE_2211_length_7249_cov_43.5209 . CDS 88 186 . - 2 ID=cds.g10601.t1;Parent=g10601.t1;3_prime_partial=true #PROT g10601.t1 g10601 MSYRPALLALLCAMLAASAVADVPVHCVYPQIVGRWTFGLGLNNGDNSIQCNSKTFRKLQSVEYDFTEPNIVVEAGVNVGTWSMVDDEAFEVRLDDGKSFLAFFEFVTAGGNVTSLCNQTQVGWFHNAPATPNSLPSNWGCFSATKVGSTESNTYPLSQISEDAMWVPDEELARHINGVQKSWVAGNGQAHSGSSIKELLRRAGKAKAMVGDRPRPAIKSTMSAQQKAARYSTLPDSWDWRNASGISYIGPQRDQLNCGSCFAHAGTEMYESRIRIMTNNTVTTLVGPQNIISCSQYSQGCDGGYAFLVSKFGQDFGHVSDSCFAYESGIEENVPCARKCASPSLLHVKDFHYIGGHWG # PASA_UPDATE: g10602.t1, single gene model update, valid-1, status:[pasa:asmbl_3781,status:12], valid-1 NODE_2211_length_7249_cov_43.5209 . gene 4590 7135 . + . ID=g10602;Name=g10602.t1 NODE_2211_length_7249_cov_43.5209 . mRNA 4590 7135 . + . ID=g10602.t1;Parent=g10602;Name=g10602.t1 NODE_2211_length_7249_cov_43.5209 . five_prime_UTR 4590 4641 . + . ID=g10602.t1.utr5p1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 4590 4707 . + . ID=g10602.t1.exon1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 4642 4707 . + 0 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 4889 5006 . + . ID=g10602.t1.exon2;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 4889 5006 . + 0 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 5146 5265 . + . ID=g10602.t1.exon3;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 5146 5265 . + 2 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 5403 5473 . + . ID=g10602.t1.exon4;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 5403 5473 . + 2 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 5653 5787 . + . ID=g10602.t1.exon5;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 5653 5787 . + 0 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 6050 6122 . + . ID=g10602.t1.exon6;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 6050 6122 . + 0 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 6378 6423 . + . ID=g10602.t1.exon7;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 6378 6423 . + 2 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 6633 6842 . + . ID=g10602.t1.exon8;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 6633 6842 . + 1 ID=cds.g10602.t1;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . exon 7002 7135 . + . ID=g10602.t1.exon9;Parent=g10602.t1 NODE_2211_length_7249_cov_43.5209 . CDS 7002 7135 . + 1 ID=cds.g10602.t1;Parent=g10602.t1;3_prime_partial=true #PROT g10602.t1 g10602 MALRLLSFAQRRLPALSQAVAQIRFSSSTTTTTTDAPVPPAAADNVEPVSHGRLRKKKSVSPPLIKDEIPKEVLAEHAAIKESRRLRRRDPVKEKAARRMTEIIQLPDMRLLNNAAFEKEGFPLRIRKLAEHYDMYEQSLGSDFTPTVNVVATFGGKFVPYRGNVLPASELQSPPVVKFEPKDYEYYTLAMVSPDGNLIYRTAGLCHWLVANIKGADVNAGITAVPYIPPLPLHNTGFHRYAIALFAQTRGIIKPTELNLDNLRIKGGPSVPPVERDPYGVFMDKRAIRIPALRKEYQLKPVGLAFFQSQWDASVSANFSSKIG # PASA_UPDATE: g6100.t1, single gene model update, valid-1, status:[pasa:asmbl_7731,status:12], valid-1 NODE_4935_length_1129_cov_29.203 . gene 136 1129 . + . ID=g6100;Name=g6100.t1 NODE_4935_length_1129_cov_29.203 . mRNA 136 1129 . + . ID=g6100.t1;Parent=g6100;Name=g6100.t1 NODE_4935_length_1129_cov_29.203 . exon 136 310 . + . ID=g6100.t1.exon1;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . CDS 136 310 . + 0 ID=cds.g6100.t1;Parent=g6100.t1;5_prime_partial=true NODE_4935_length_1129_cov_29.203 . exon 488 608 . + . ID=g6100.t1.exon2;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . CDS 488 608 . + 2 ID=cds.g6100.t1;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . exon 764 830 . + . ID=g6100.t1.exon3;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . CDS 764 830 . + 1 ID=cds.g6100.t1;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . exon 1049 1129 . + . ID=g6100.t1.exon4;Parent=g6100.t1 NODE_4935_length_1129_cov_29.203 . CDS 1049 1129 . + 0 ID=cds.g6100.t1;Parent=g6100.t1;3_prime_partial=true #PROT g6100.t1 g6100 QTLETELEKQKTINDNLCREFATAAKGFVDWLNASKQSISARGGSLEDQLSNVDGIIAGHAQGDVKLAEIDAIDAKIQQRQITNNPHTSITVQDAKAQWYQYQLLLKKKKTLLEAEIENSKRAGLSADQLKEINDNFAYFDKNGNKSL # PASA_UPDATE: g7046.t1, single gene model update, valid-1, status:[pasa:asmbl_10193,status:12],[pasa:asmbl_10197,status:12], valid-1 NODE_977_length_15192_cov_39.0306 . gene 11339 13389 . - . ID=g7046;Name=g7046.t1 NODE_977_length_15192_cov_39.0306 . mRNA 11339 13389 . - . ID=g7046.t1;Parent=g7046;Name=g7046.t1 NODE_977_length_15192_cov_39.0306 . five_prime_UTR 13318 13389 . - . ID=g7046.t1.utr5p1;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . exon 13052 13389 . - . ID=g7046.t1.exon1;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . CDS 13052 13317 . - 0 ID=cds.g7046.t1;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . exon 12607 12740 . - . ID=g7046.t1.exon2;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . CDS 12607 12740 . - 1 ID=cds.g7046.t1;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . exon 11339 12272 . - . ID=g7046.t1.exon3;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . CDS 11386 12272 . - 2 ID=cds.g7046.t1;Parent=g7046.t1 NODE_977_length_15192_cov_39.0306 . three_prime_UTR 11339 11385 . - . ID=g7046.t1.utr3p1;Parent=g7046.t1 #PROT g7046.t1 g7046 MHRLYTVGAACQICVTPARTRILLNRSSKKCVIECARHNNPSAKMSTSTRPLPRHVLFCNDDGPPDPSDSPFIVPFVAALSKRIGCHASVAIPASNMSFIGKAMLAREHAHVNFYNVATGAISRKQNNGDWVLVTGTPATCVNIALGHPELLAVASSDTNGSLQQQPPPPPQQQQRTLPPPVDLVVSGPNVGRNTGAAIILTSGTVGAALEASMCGVRAIALSFAYYNGKNFPEDEVSRAVAVGCDIVLELWDHWQAGVDVYNVNIPLTSRTDVLPVCMTTAARSYYGCIYSPAFKLGQGNGGEESTRVERVFGGDNSTVSPGSDGAAYEPEDTTEQQISFRHAMRMHTTNPAATAFGTDAWAVSTGAIVSVTPLLSHLAEPPVSPGCVCGGVVASARSSGQSDALVNRLFPYSSPPEALRDLPPYKR* # ORIGINAL: g7045.t1 original gene structure, not modified by PASA NODE_977_length_15192_cov_39.0306 AUGUSTUS gene 7296 9287 . + . ID=g7045;Name=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS mRNA 7296 9287 . + . ID=g7045.t1;Parent=g7045;Name=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 7296 7642 . + . ID=g7045.t1.exon1;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 7296 7642 . + 0 ID=cds.g7045.t1;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 7939 7987 . + . ID=g7045.t1.exon2;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 7939 7987 . + 1 ID=cds.g7045.t1;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 8239 8484 . + . ID=g7045.t1.exon3;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 8239 8484 . + 0 ID=cds.g7045.t1;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 8680 8732 . + . ID=g7045.t1.exon4;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 8680 8732 . + 0 ID=cds.g7045.t1;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 9107 9287 . + . ID=g7045.t1.exon5;Parent=g7045.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 9107 9287 . + 1 ID=cds.g7045.t1;Parent=g7045.t1 #PROT g7045.t1 g7045 MASAGDAPADHSPDDEWVEQGRDDDSGDDASGSDHDNDIFMEDMEDDDGIESEETDGSDAATAAPTDDKPAEIDPDACGGCTHYRRKCVIKPLCCNGEFFPCRHCHNEAKSHEMDRHKVEEIKCCKCDTVQKVQQYCESCGICFGKYFCSICRFFDDDTTKLQFHCDDCGICRVGGRDNFFHCAMCGMCYHLELRNNHKCIERAMHANCSICLECGHPLHLACRQTYLNTGKSSCPVCRKSMFDMGESWREMDAIVRATPMPPDYANVRAALKCNDCECYSNPFPPQRLKH* # ORIGINAL: g7047.t1 original gene structure, not modified by PASA NODE_977_length_15192_cov_39.0306 AUGUSTUS gene 13890 14471 . - . ID=g7047;Name=g7047.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS mRNA 13890 14471 . - . ID=g7047.t1;Parent=g7047;Name=g7047.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 14326 14471 . - . ID=g7047.t1.exon1;Parent=g7047.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 14326 14471 . - 0 ID=cds.g7047.t1;Parent=g7047.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 13890 14112 . - . ID=g7047.t1.exon2;Parent=g7047.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 13890 14112 . - 1 ID=cds.g7047.t1;Parent=g7047.t1 #PROT g7047.t1 g7047 MNVPTLICLRPTGKAHWEARYTFSQTGRLVHNIIDAQFEFKDGKIYRHTDTFDFWRWSGQALGLSGSLLGWTGFMQNAIRNKAKAGLDAYIAKRGLDPNAPKSESEKEGGDAAATAPAAASR* # ORIGINAL: g7044.t1 original gene structure, not modified by PASA NODE_977_length_15192_cov_39.0306 AUGUSTUS gene 98 4014 . - . ID=g7044;Name=g7044.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS mRNA 98 4014 . - . ID=g7044.t1;Parent=g7044;Name=g7044.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 1278 4014 . - . ID=g7044.t1.exon1;Parent=g7044.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 1278 4014 . - 0 ID=cds.g7044.t1;Parent=g7044.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS exon 98 942 . - . ID=g7044.t1.exon2;Parent=g7044.t1 NODE_977_length_15192_cov_39.0306 AUGUSTUS CDS 98 942 . - 2 ID=cds.g7044.t1;Parent=g7044.t1 #PROT g7044.t1 g7044 MLTLKAKSVSSAEATPRYEFKRAKRGERELDALLCAVVGAAADTAVRATRSRRSASTLSTRDQYSSSENNGSESSELAIARTEKRRSGRPPIRSARTTLTSSRRRLRPRLSRPTYDSSTATTADSDDSASDSDIDFVSENRFSDGLNAGAVSASSPDSHSNDTSNSVHHPVRSSHRHTSSAGDVRQQRNGNDNYVVNRRRHSREPSLRVGGADMCVDSSSLASVASSKNASVGVVSSSESSGWALSESGNSGDNGDSDSSGNRADSGDCSNGDSNNGGHNGASGDSGGSGVTTAIGRRRKRDALSNDSSDDNYVSCGLVACAAVRRSARQRTLFSRESAVRISDRRRGKANRSVNCIESSASESAIAAQTERPIRRKAAHVIVSDSASPPDQSSRAQWNCGESPILAPSARDSEREDVSTPPSDDVDISPDNNQRGCGHASLQRKTGDSSTLLNHTEKRDDTSVHHTNQGDRNESERLLSGQTIANNSMSASASEYSSEYSSSPSCVGMESPSSPGKEPTSDESSSVSSRIPSAWPCFSSDVSAHSTPVCRKRSAVDAQLFGSSDECDGDGGKANATARRQRSKRLRTMASAVQSTGNVAAAVDATSTPSALVDDADRCTHAPADIDTDVPCDESLASPRDLHTVDVTPAHCSANDAGSHVRAIESLTAMVHNTTPVSVEDMIGESFGASQHPPTGKRRRAKLTIRSQCATLAVHSDHEADSVTTVSPLTAPVSTIGNVSGSSPTPPPPSAITIGNVSSSPTPPSQSPPPTPPAIEIASAIGRNRRAKTTIRTRSLSVCGEIVAGQSASSETHVQISPNAASLRGADVHPHNSVREGEGGMRFDSDGCSNGVRETDVMDRGGVLGNDATDGNDAIECNTLNESNNDRSTARDNGPLPTVTPSTDGSDGQPTPDPSRTDASIESIPSTDYSYSSHPSSPISSTNTISPASKSYSPPDSTCGALLPTLRIVIYDDSDEDAKDLLRAFVLFALWEGPASLSLVAPGLFDGIISDSAPLFKRDILTQSFDSATKSGNVPQGNSSAPALPRMSTIVLPFQALDATMRGCDTCHRNDRPTVSRCVDEVSRCLDVRISPHLDGGGGWCVGAVALHVVRTSSLPSRIARVKNTRRLSESRAKNELQQIEPIVIRLSPKAPFIVSLREIVRLCCVGEKCDESMLGVLSAKQKDMPQWDKHAFT # ORIGINAL: g5833.t1 original gene structure, not modified by PASA NODE_4165_length_2085_cov_50.8353 AUGUSTUS gene 477 842 . + . ID=g5833;Name=g5833.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS mRNA 477 842 . + . ID=g5833.t1;Parent=g5833;Name=g5833.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS exon 477 842 . + . ID=g5833.t1.exon1;Parent=g5833.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS CDS 477 842 . + 0 ID=cds.g5833.t1;Parent=g5833.t1 #PROT g5833.t1 g5833 HTERELANVTFPATTSNSRTKTAASIGRVEKVLFGNVRRKTGDDHDHEYGLDVALIKLSGKKEPANVLTKLEDIEAWPRDGGLVSAPRFGGVVTAKKLMAALRSRLQSRGRVGIDSRQGWV* # ORIGINAL: g5834.t1 original gene structure, not modified by PASA NODE_4165_length_2085_cov_50.8353 AUGUSTUS gene 1109 2026 . - . ID=g5834;Name=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS mRNA 1109 2026 . - . ID=g5834.t1;Parent=g5834;Name=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS exon 1863 2026 . - . ID=g5834.t1.exon1;Parent=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS CDS 1863 2026 . - 0 ID=cds.g5834.t1;Parent=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS exon 1546 1679 . - . ID=g5834.t1.exon2;Parent=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS CDS 1546 1679 . - 1 ID=cds.g5834.t1;Parent=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS exon 1109 1458 . - . ID=g5834.t1.exon3;Parent=g5834.t1 NODE_4165_length_2085_cov_50.8353 AUGUSTUS CDS 1109 1458 . - 2 ID=cds.g5834.t1;Parent=g5834.t1 #PROT g5834.t1 g5834 MVVAGPRAPNTIENGWKLSPKAQVIVKVADMGLSRDTTATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDSPKLVYAAMEACWRKHPETRPQFSQLVLQLRRGMAVLCGTEGGGGGDNVSDSVAALGQLKPFAITVPEDAYAETVGEEESLYTLQNPIFRKDSNSLTGHSSA* # ORIGINAL: g1681.t1 original gene structure, not modified by PASA NODE_2453_length_6208_cov_40.49 AUGUSTUS gene 3816 6057 . + . ID=g1681;Name=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS mRNA 3816 6057 . + . ID=g1681.t1;Parent=g1681;Name=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS exon 3816 4089 . + . ID=g1681.t1.exon1;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS CDS 3816 4089 . + 0 ID=cds.g1681.t1;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS exon 4708 4857 . + . ID=g1681.t1.exon2;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS CDS 4708 4857 . + 2 ID=cds.g1681.t1;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS exon 5197 5382 . + . ID=g1681.t1.exon3;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS CDS 5197 5382 . + 2 ID=cds.g1681.t1;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS exon 5807 6057 . + . ID=g1681.t1.exon4;Parent=g1681.t1 NODE_2453_length_6208_cov_40.49 AUGUSTUS CDS 5807 6057 . + 2 ID=cds.g1681.t1;Parent=g1681.t1 #PROT g1681.t1 g1681 MAVLRRAVHRRYITRAMAPQARPHTVGRKTAIAGASLRRQRNRIGTSGLSLTGWPPKYGYLLLFVGILASSTTALQPIPKVALVGESGLFVNGEAQLFPLLAIEGCQRALVELYGSTASSSCVYINLQGTATYANMEPFVQNASYSHFVGIGFQVAVKLPELARDYPNKTFTLVDAAGPDGLRNLQGLSFDEGQASFLAGCIAGLFTDSGRVGVIAAIPFVPLVRFRNGFLMGALYTCPECAVFGIYVPTFTDDAITVPAAQGILASKCCMHGRRTLHSAASRLPQ* # PASA_UPDATE: g1680.t1, single gene model update, valid-1, status:[pasa:asmbl_4347,status:12], valid-1 NODE_2453_length_6208_cov_40.49 . gene 88 3064 . + . ID=g1680;Name=g1680.t1 NODE_2453_length_6208_cov_40.49 . mRNA 88 3064 . + . ID=g1680.t1;Parent=g1680;Name=g1680.t1 NODE_2453_length_6208_cov_40.49 . five_prime_UTR 88 89 . + . ID=g1680.t1.utr5p1;Parent=g1680.t1 NODE_2453_length_6208_cov_40.49 . exon 88 3064 . + . ID=g1680.t1.exon1;Parent=g1680.t1 NODE_2453_length_6208_cov_40.49 . CDS 90 2774 . + 0 ID=cds.g1680.t1;Parent=g1680.t1;5_prime_partial=true NODE_2453_length_6208_cov_40.49 . three_prime_UTR 2775 3064 . + . ID=g1680.t1.utr3p1;Parent=g1680.t1 #PROT g1680.t1 g1680 YGPLAITGLQLQTLRNRTQHVTSRYTSVYGERLVIRRGRSFVFGIDTSRPIPSQGVYVALTFVPIDTSGMYGGGDAHSKDGSFMRRKIGDTIAIPALPRYVEEGHLSGNGSGSVDGKIEQGARIMWTSWSGCYVSVTLASDFAVGEYDFVVRLHVDGIGSCEWSTNPAENGDLGLGSLGNISDRSSDLAEDEEESSFLLRRAGSSMSSMSSLGRSDSQSSFLKTSKGRIMLASPTVVVLFNPWCEADPVYIVERSERDEYVLSPHGVIHDGTYTNTTVRPWNYGQFESDCLSAALALLDGLSVADRGNPKRVIRHVSQRIATESPDSACVLSCRAMMSAPSRRSTASDILRPQRPTFLQPIDTKRVAKREKKEKDGRDSFTMMGSMAAAQFESAPTQDERRSPTRWNGSPVILRSWLRRGRQSVCFGSSAVASAVLVTVLRCLGIPSRAITCYEAAHGHVQGEGGLASVGIEIDPCGLPASGSVAPVRAAHSWSECHIRSRDGAGNHYSGWHAVDPLPPGGTTDEKGWGECKGPVPVEMIREFSVDSLPKGKTKSLTKSALSYFVGGIFAPVHYQLPAEPVTPEDSLENASQPTARKPPPTPVDIAVARNKTGRLLVTKMCGPSLVSQLDLTANYRGGKNGASAGGDPSATSASPMAAGLLFDAVVGEDLTIGRPFNVGLEVTCQASCPEGRRLAVTVSACAERSRGAGRVIETFKSKTEIISLEPGESRTVALVVEVLDYAQYLKECCAMRLYSFVVMLPQSREKRQRGPSILGSLSPEAVIHVADTPFVLSLPKVVVEIPVRVLSRTSTSAVVQVSNVLPFPLTNAAIHAEGSSVLVPAQQVAVGIGTVASGASAVAKVPIYATEVGNHVIVACLECDQITGACGFGVVSIR* # ORIGINAL: g2255.t1 original gene structure, not modified by PASA NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS gene 2522 3627 . - . ID=g2255;Name=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS mRNA 2522 3627 . - . ID=g2255.t1;Parent=g2255;Name=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 3064 3627 . - . ID=g2255.t1.exon1;Parent=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 3064 3627 . - 0 ID=cds.g2255.t1;Parent=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 2709 2983 . - . ID=g2255.t1.exon2;Parent=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 2709 2983 . - 0 ID=cds.g2255.t1;Parent=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 2522 2543 . - . ID=g2255.t1.exon3;Parent=g2255.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 2522 2543 . - 1 ID=cds.g2255.t1;Parent=g2255.t1 #PROT g2255.t1 g2255 MAACFRAGVILSVYLKAGKRVTVERDILMVLCSEGAPLAIPRLIASLPLSLAETEGEAQYPVASPLVRNPVPVTQFSVLRVGYAVFEALTYAHTQNVCHCDVKPSNILTDTNGDVLLADWDVAQRMATDQVPRLSGTFRFLSLRLMGAVVSQKNIKPLPIDDLEALFYTMLTWTAGPCMRDPDSIHTQNAFLAWKSGLLRSPHLLKDFLRDCQAPNVKSFLLGAQSIFFAGTDEASDYEECKIGMRLLFKTWKDNEAPEVKSEPIYASGSDDEDEYSDGRMVVRPY* # ORIGINAL: g2256.t1 original gene structure, not modified by PASA NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS gene 3975 5080 . - . ID=g2256;Name=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS mRNA 3975 5080 . - . ID=g2256.t1;Parent=g2256;Name=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 4765 5080 . - . ID=g2256.t1.exon1;Parent=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 4765 5080 . - 0 ID=cds.g2256.t1;Parent=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 4443 4672 . - . ID=g2256.t1.exon2;Parent=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 4443 4672 . - 2 ID=cds.g2256.t1;Parent=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS exon 3975 4280 . - . ID=g2256.t1.exon3;Parent=g2256.t1 NODE_2689_length_5444_cov_32.3129_potentialcontaminant AUGUSTUS CDS 3975 4280 . - 0 ID=cds.g2256.t1;Parent=g2256.t1 #PROT g2256.t1 g2256 MAAIGSFDWLVQELFVSEDRLINAGPVERPQLQQRIDLLKASITRAEECREAERQERAAERQERERAAKRQERERAAERAEKLKAIERQHEYNMAKLRIDRDKAKAAIMKSMAQRGGGNTSSFRTVYEDMAEDFMKMDEKLKELPKLKPLATEVEKGIVELIKSSTVGRVRAGTFEDDEKAAQQAAVDAPAIKKSRKKKYPAESWVQKLFMDMGARLLSGSNTTAIRDHSHSYIGPPIQDKSMRPDLVRVPVGLVSSWHVVVAVGELKDSIDGHKAKKAVPSS* # ORIGINAL: g7516.t1 original gene structure, not modified by PASA NODE_4591_length_1423_cov_45.5898 AUGUSTUS gene 137 1423 . - . ID=g7516;Name=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS mRNA 137 1423 . - . ID=g7516.t1;Parent=g7516;Name=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS exon 1370 1423 . - . ID=g7516.t1.exon1;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS CDS 1370 1423 . - 0 ID=cds.g7516.t1;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS exon 942 1253 . - . ID=g7516.t1.exon2;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS CDS 942 1253 . - 0 ID=cds.g7516.t1;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS exon 520 618 . - . ID=g7516.t1.exon3;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS CDS 520 618 . - 0 ID=cds.g7516.t1;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS exon 137 352 . - . ID=g7516.t1.exon4;Parent=g7516.t1 NODE_4591_length_1423_cov_45.5898 AUGUSTUS CDS 137 352 . - 0 ID=cds.g7516.t1;Parent=g7516.t1 #PROT g7516.t1 g7516 GFDARNQSLSTEDAIKLEVIRNYLDFKVGEVWSEINGELTREGIRPTSPDYEMVVEAARAGEAKARKTLEKQEWLQQVQETRDLKEEQSFYGTIRHAHGMVDKAKLDFQSFLRRTSNFEALKTAKKRQDQMIKQSRLSVDLTGDSSHVDTALHTTTFCGRRISVQADSIALRPGILANTNFGSDFAARVTHDKRSATQESAYSSDEDGNDSDSSLFDLDKDALGLSL # ORIGINAL: g4238.t1 original gene structure, not modified by PASA NODE_4795_length_1240_cov_40.2446 AUGUSTUS gene 75 751 . - . ID=g4238;Name=g4238.t1 NODE_4795_length_1240_cov_40.2446 AUGUSTUS mRNA 75 751 . - . ID=g4238.t1;Parent=g4238;Name=g4238.t1 NODE_4795_length_1240_cov_40.2446 AUGUSTUS exon 602 751 . - . ID=g4238.t1.exon1;Parent=g4238.t1 NODE_4795_length_1240_cov_40.2446 AUGUSTUS CDS 602 751 . - 1 ID=cds.g4238.t1;Parent=g4238.t1 NODE_4795_length_1240_cov_40.2446 AUGUSTUS exon 75 237 . - . ID=g4238.t1.exon2;Parent=g4238.t1 NODE_4795_length_1240_cov_40.2446 AUGUSTUS CDS 75 237 . - 1 ID=cds.g4238.t1;Parent=g4238.t1 #PROT g4238.t1 g4238 FLRPETAQGIFVNFKNLLEFNNNRMPFAAAQIGNSFRNEISPRAGLLRVREFTMAEIEHFVDPNDKRHPKFKNVADIVMTLFPADRQVAGQETVEMSIGEAVGK # PASA_UPDATE: g6507.t1, single gene model update, valid-1, status:[pasa:asmbl_3716,status:12], valid-1 NODE_2188_length_7361_cov_42.3988 . gene 1 1379 . - . ID=g6507;Name=g6507.t1 NODE_2188_length_7361_cov_42.3988 . mRNA 1 1379 . - . ID=g6507.t1;Parent=g6507;Name=g6507.t1 NODE_2188_length_7361_cov_42.3988 . five_prime_UTR 1115 1379 . - . ID=g6507.t1.utr5p1;Parent=g6507.t1 NODE_2188_length_7361_cov_42.3988 . five_prime_UTR 785 865 . - . ID=g6507.t1.utr5p2;Parent=g6507.t1 NODE_2188_length_7361_cov_42.3988 . exon 1115 1379 . - . ID=g6507.t1.exon1;Parent=g6507.t1 NODE_2188_length_7361_cov_42.3988 . exon 1 865 . - . ID=g6507.t1.exon2;Parent=g6507.t1 NODE_2188_length_7361_cov_42.3988 . CDS 1 784 . - 0 ID=cds.g6507.t1;Parent=g6507.t1;3_prime_partial=true #PROT g6507.t1 g6507 MSFEQARKRSYGHVGYNDGPSPKQARLHYSYDGLTVPPHMQAAHTERDLSRGANNRSVGPSRESLQDRGLYSGGYGAHNSAYPGGGVGSGIGSGVGSGVGSGNSYFDDRAQRNRHRPSPTVEERIYLLEQRVSELNMSMTNFRADINKMFHNMLQLQSELTSVARSVAHPGAVTPATTNAGARQDFPPTQQRPHGQVTSTLGPQLPPQAQQQMHTGARHDVSPTQQRPHGQVTSTLAPQLPPQAQQQHDASPTQQRPHELT # PASA_UPDATE: g6508.t1, single gene model update, valid-1, status:[pasa:asmbl_3715,status:3], valid-1 NODE_2188_length_7361_cov_42.3988 . gene 2050 5073 . + . ID=g6508;Name=g6508.t1 NODE_2188_length_7361_cov_42.3988 . mRNA 2050 5073 . + . ID=g6508.t1;Parent=g6508;Name=g6508.t1 NODE_2188_length_7361_cov_42.3988 . five_prime_UTR 2050 2171 . + . ID=g6508.t1.utr5p1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 2050 2353 . + . ID=g6508.t1.exon1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 2172 2353 . + 0 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 2663 2740 . + . ID=g6508.t1.exon2;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 2663 2740 . + 1 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 3102 3173 . + . ID=g6508.t1.exon3;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 3102 3173 . + 1 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 3281 3352 . + . ID=g6508.t1.exon4;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 3281 3352 . + 1 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 3681 3746 . + . ID=g6508.t1.exon5;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 3681 3746 . + 1 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 3863 4335 . + . ID=g6508.t1.exon6;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 3863 4335 . + 1 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . exon 4726 5073 . + . ID=g6508.t1.exon7;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . CDS 4726 4829 . + 2 ID=cds.g6508.t1;Parent=g6508.t1 NODE_2188_length_7361_cov_42.3988 . three_prime_UTR 4830 5073 . + . ID=g6508.t1.utr3p1;Parent=g6508.t1 #PROT g6508.t1 g6508 MSAPYRSHLCSALLLACMGALLFPYTAGAQYGCFENYCRCDTVSGALLSCSFPNPTAITSLSSSPVDGKLASLPAGVFDQLTALESLDLSGNLLASLPAGIFDKQTGMKRLNLAHNQLTSLSPGIFDNLKKLNFLDISYNNLTSLPLGVFDSQDLFLLANNNPGSKGYLCNAPMAHCISNRCGDCFCDAGRTGFICSFECQPGWFGPDCLSKCECPTCDPVTGKGSCVVSSSAQPAPSSAQPTGTCSPSISVATTTATAYITVTETATATVNVMGPVETSTVTVTTTAAVQTVTVTNTDAVTVLATPTPCGSQEAEWTIAFEEWKDQFAEWLRSGCPAAPEHGAGNIV* # ORIGINAL: g12938.t1 original gene structure, not modified by PASA NODE_661_length_19354_cov_41.5869 AUGUSTUS gene 10031 12231 . - . ID=g12938;Name=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS mRNA 10031 12231 . - . ID=g12938.t1;Parent=g12938;Name=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 11953 12231 . - . ID=g12938.t1.exon1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 11953 12231 . - 0 ID=cds.g12938.t1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 11174 11849 . - . ID=g12938.t1.exon2;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 11174 11849 . - 0 ID=cds.g12938.t1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 10770 10984 . - . ID=g12938.t1.exon3;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 10770 10984 . - 2 ID=cds.g12938.t1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 10492 10606 . - . ID=g12938.t1.exon4;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 10492 10606 . - 0 ID=cds.g12938.t1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 10337 10385 . - . ID=g12938.t1.exon5;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 10337 10385 . - 2 ID=cds.g12938.t1;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 10031 10223 . - . ID=g12938.t1.exon6;Parent=g12938.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 10031 10223 . - 1 ID=cds.g12938.t1;Parent=g12938.t1 #PROT g12938.t1 g12938 MYGYGCQTLCNCENDAACDALTGACTCAFGWTGVKCDMVVTPSVPKVNASAEVTQYGIGIRLRWSHDDVGPRAWNSSWRYEIRRLGCFPKVYQVGDVLTFLDTDVVINQGYAYFVQPFNSRNVSSATAGQISIERLERAEVPAPPYDVSSTATLNPDNQQSMIKFTWKEDISSGPIVQTYIFRDDRLLMQGFMATEYKDRDVVFGRTYVYEIISLNQYGKSNATRFSETASVGPTDSSTSTSSSNNVAAPVAGSVVGAIVGAAGIVFAILFVRKRTSRKKMEAVARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLASSDEIRSARSAFMAEIDLMRTIPIHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSHVTDFTSMDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRPPNSIENGWKLSPKAQVIVKVADMGLSRDTGGSGDYYMAKTRRKLPVKW* # ORIGINAL: g12939.t1 original gene structure, not modified by PASA NODE_661_length_19354_cov_41.5869 AUGUSTUS gene 17080 19354 . - . ID=g12939;Name=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS mRNA 17080 19354 . - . ID=g12939.t1;Parent=g12939;Name=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 18250 19354 . - . ID=g12939.t1.exon1;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 18250 19354 . - 1 ID=cds.g12939.t1;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 17793 17953 . - . ID=g12939.t1.exon2;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 17793 17953 . - 0 ID=cds.g12939.t1;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 17531 17594 . - . ID=g12939.t1.exon3;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 17531 17594 . - 1 ID=cds.g12939.t1;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 17080 17202 . - . ID=g12939.t1.exon4;Parent=g12939.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 17080 17202 . - 0 ID=cds.g12939.t1;Parent=g12939.t1 #PROT g12939.t1 g12939 VVGTATSPGEGSVAHGDGAGVFLSPFQDYVDKSFDALLKAVSSGDALPASLGQPNDDESMGVRASVVAAVLAVAARDDRHPVGRLLSDLADAFQTTYMGAYASPRAVSMATTEVRGYIGDVCRILSAAYGPLGALVASDDDAYPPPSAEAYATEETTWDEALSCAIESLLFPRLSFMLRALYDKLEFHSNGSYSRALAWLGDMGDVALLSRLAVRRALWLMDDEEARRSAFGHAMACGKELVGVHHVGAGGMIDGSKKYESALAQGRGGSGLGGMRASAPSAVLPARGSPNAVRRVGEDEGTECAPSPDRDVHGAPCEGHSRSQSVPAAEIGKEGPSEHLRRKGESSVSPAKDKGECVGSSLDIKAEKLKYASGGQYLRAVEAFRRLPTAVSPRAKLHVLRKTFVEISAAVGKFWGDGDGIASLDDLLPVFLLVLIRAKVSSLGSEIRLMDDFSTDRQITGEVGLMYTTLKACYAQVLVERHL* # ORIGINAL: g12937.t1 original gene structure, not modified by PASA NODE_661_length_19354_cov_41.5869 AUGUSTUS gene 4783 8515 . + . ID=g12937;Name=g12937.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS mRNA 4783 8515 . + . ID=g12937.t1;Parent=g12937;Name=g12937.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 4783 4814 . + . ID=g12937.t1.exon1;Parent=g12937.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 4783 4814 . + 0 ID=cds.g12937.t1;Parent=g12937.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS exon 5155 8515 . + . ID=g12937.t1.exon2;Parent=g12937.t1 NODE_661_length_19354_cov_41.5869 AUGUSTUS CDS 5155 8515 . + 1 ID=cds.g12937.t1;Parent=g12937.t1 #PROT g12937.t1 g12937 MVTSMGFSAFSLSASELFAGNSGFLDDYDMIDGPSAMICSNAVLNVNASARIQRVLQTSFVQESNNVTFGILSFIDTGLCKRAITACGSGPELLLRIDDRNEAGTVAAAVRKMLSSVPKRPDLIIVVCPTMSVDELRESAFAGYLVDAGVDLVLIPDGNYLATDDTTNATFVPPPILRLSIGSEQRPLLVASSLGAGRTIGKIDLTVRTDGALSSSDRVSVRPTTKHVFLRPCRQGNVTLTYPKCVDPAPDIAAVLNDMNDRVNAELDSTVVGTLKEAINGSVIHCRFLECGVGDILTDAMRHYLPNKCDIAMVNGGGIRAGLPKGNTTARAVLNAVPFGNTVSSFKISGGSIRDAILHSLSLVTNITSLPTVSPTGSGRYLQFSGLRLRYNPRNDISTRILSIQIEVSAGVYAPINFIAKYQCCSLNYLLDGGDEFDMLKKFATERVDYSVTQELVIRKYLATFPEGLAVAIGDRIIVDTTTTLPDDFCSPPCIHGTCSAKNYTCICEPDWVGSDCSIDARKFVPVDVCKLHRDNGTILFRARGVAARHPGGVAVVVFFATLFAMEVVCVPYFTRRFMRVVHKTSVWPNTVLPSARWTRQNIVRLVLLLLQGIQIHAIVLNVDLSDSFVDMNGKVFGSIGATAFSSAFLWYFWVVMSVTLLWIAYAVTYIVDGGSFLRRTGPGRVFMFPADQLLQLWVTAGFIPTLLNGMKAFHCWYDDSNATAYMATSGVCDVVCWSSQHWAYVSVALVTILVYYPLATISALLWQDLDQQLDVRYSPSAFVVEPLVKVALVIMRVYFTTTPKAFLPIVALICTITAVYHKKWSPCYVAWVNVPLAVAYASAAATSIVLFIGVISERNGVFYAAPAVWVAASVYVTGYLHWIYPDVLVLRPVSGDSDGNARARNMLMAMKHVFTLSNRRGSTLVSTMSLSVDKPGKASSRLTAPVAWTLEEPVADAITCTYTSTSTTVSEPPHYSCGDVIPHHRKSDPNALQNARRVVCAAVCDATLDEQTGIWFAGLDDALRWPTTLFAIGDNAAFVEMVREIYDDRKKGASSSFAVDILAHQCNPYAQAQECTVSFALGKEGGTDVVARDDPAAGITLQCHASKGIELIDGTVTAEAKSSTTAPVD* # ORIGINAL: g5674.t1 original gene structure, not modified by PASA NODE_4049_length_2281_cov_37.374 AUGUSTUS gene 140 1995 . + . ID=g5674;Name=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS mRNA 140 1995 . + . ID=g5674.t1;Parent=g5674;Name=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS exon 140 309 . + . ID=g5674.t1.exon1;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS CDS 140 309 . + 0 ID=cds.g5674.t1;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS exon 627 741 . + . ID=g5674.t1.exon2;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS CDS 627 741 . + 1 ID=cds.g5674.t1;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS exon 902 957 . + . ID=g5674.t1.exon3;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS CDS 902 957 . + 0 ID=cds.g5674.t1;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS exon 1229 1409 . + . ID=g5674.t1.exon4;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS CDS 1229 1409 . + 1 ID=cds.g5674.t1;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS exon 1765 1995 . + . ID=g5674.t1.exon5;Parent=g5674.t1 NODE_4049_length_2281_cov_37.374 AUGUSTUS CDS 1765 1995 . + 0 ID=cds.g5674.t1;Parent=g5674.t1 #PROT g5674.t1 g5674 HYHRRPIKRKAIAGVCIRLADRYGLSSDESLYGNALRARDYGTVRFLVRSKYAAVNRRTGGNRSELPLTEEGANWDDLLSLAVEGRSWLQVKLVKQDYRAALQVMLTYDLSPEQFSHLNLEENAASQPPYVPPPVAPADTYFPLGLNFDDHVHFVGTESELLSCAAALSHPDVSVIGLDAEWRPTIFRNGTSRCALLQLATETHAFLIDVIALGTAPDAGDRARMTADPSPLCKFWDSVLSRSGVTILGM* # PASA_UPDATE: g2695.t1, single gene model update, valid-1, status:[pasa:asmbl_7833,status:12], valid-1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . gene 171 1036 . + . ID=g2695;Name=g2695.t1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . mRNA 171 1036 . + . ID=g2695.t1;Parent=g2695;Name=g2695.t1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . exon 171 380 . + . ID=g2695.t1.exon1;Parent=g2695.t1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . CDS 171 380 . + 0 ID=cds.g2695.t1;Parent=g2695.t1;5_prime_partial=true NODE_5065_length_1045_cov_41.7526_potentialcontaminant . exon 626 1036 . + . ID=g2695.t1.exon2;Parent=g2695.t1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . CDS 626 988 . + 0 ID=cds.g2695.t1;Parent=g2695.t1 NODE_5065_length_1045_cov_41.7526_potentialcontaminant . three_prime_UTR 989 1036 . + . ID=g2695.t1.utr3p1;Parent=g2695.t1 #PROT g2695.t1 g2695 VSGMSYVFDGKAAPQNRIISIDVKGAPIDPDRVYTVATRAYLTLGKDGYDMFANREYVVDSESGVLLPTMVRNYFEQLAVVSKHSKMTTTARRVSAVVRHVPDLQKTPHGAVMHDQQDMRPFSGHKGATGSASNLGLRHRSLAKLEQVSGQKITGSSTQLNAIMAVIHPTTEGRISNIADLDHAEGTGAP* # ORIGINAL: g11141.t1 original gene structure, not modified by PASA NODE_2889_length_4832_cov_35.9195 AUGUSTUS gene 323 4370 . + . ID=g11141;Name=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS mRNA 323 4370 . + . ID=g11141.t1;Parent=g11141;Name=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 323 418 . + . ID=g11141.t1.exon1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 323 418 . + 0 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 569 731 . + . ID=g11141.t1.exon2;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 569 731 . + 0 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 1181 1303 . + . ID=g11141.t1.exon3;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 1181 1303 . + 2 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 1622 1731 . + . ID=g11141.t1.exon4;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 1622 1731 . + 2 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 2102 2213 . + . ID=g11141.t1.exon5;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 2102 2213 . + 0 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 2432 2569 . + . ID=g11141.t1.exon6;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 2432 2569 . + 2 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 2902 3034 . + . ID=g11141.t1.exon7;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 2902 3034 . + 2 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 3676 3874 . + . ID=g11141.t1.exon8;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 3676 3874 . + 1 ID=cds.g11141.t1;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS exon 4113 4370 . + . ID=g11141.t1.exon9;Parent=g11141.t1 NODE_2889_length_4832_cov_35.9195 AUGUSTUS CDS 4113 4370 . + 0 ID=cds.g11141.t1;Parent=g11141.t1 #PROT g11141.t1 g11141 ALLSSLKALSEETCYKESLKIEPRGGTSLQDKKVALIVNPTARGGKAGKIFNEKVMRLIEGMFGSYKVAMTRYKGHAKELATQLLNEDQSWNVIVAVGGSGTVNEIVNAYIECNGLVKDVLIGILPLGENDDFAHSLSLPSDPVDALRILQEGHSVQTDIGVVESYQDKGQTARRYFANLATAGFLSETLHVDPKTGKLPKPKEKVIDDSIGARLRYKSDGTWLEASANTLLAVCNGRSVAGMTFAPDADMSDGYLDLVVCDGTDMKGNVKLVKLLQKGKAVPTDSCKMGQTKNAIEVEVRPSDLARSFFPVGCDGEDCGYLPATFSIVEGAVCVIVPSTHGILRKGAKDGRESSPKELWRSGSVSDLKRSSSVSNVTGTLNGTMRASASTSDLQRGASPGYGRTANSLLSSMLKRKESTNRPGRSDSVSSVEIAGSDSESKC* # ORIGINAL: g783.t1 original gene structure, not modified by PASA NODE_676_length_19187_cov_40.4087 AUGUSTUS gene 3301 5116 . - . ID=g783;Name=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS mRNA 3301 5116 . - . ID=g783.t1;Parent=g783;Name=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS exon 4947 5116 . - . ID=g783.t1.exon1;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS CDS 4947 5116 . - 0 ID=cds.g783.t1;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS exon 4619 4733 . - . ID=g783.t1.exon2;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS CDS 4619 4733 . - 1 ID=cds.g783.t1;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS exon 4239 4355 . - . ID=g783.t1.exon3;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS CDS 4239 4355 . - 0 ID=cds.g783.t1;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS exon 3301 3972 . - . ID=g783.t1.exon4;Parent=g783.t1 NODE_676_length_19187_cov_40.4087 AUGUSTUS CDS 3301 3972 . - 0 ID=cds.g783.t1;Parent=g783.t1 #PROT g783.t1 g783 MNPQRLVTPGLHGYAVEYSPYDGNRVAIATGKNFGISGPGALIVAGCDGVSISELRRFETSDCVFDCAWSEDVPGNVVAALGDGTLQIWSVDGPQTTAPSAMFDEHSAEVYGVDWNLFAKTTFVSASWDNSVKVWDPLRAQSIGTYTHHRNVVYAAIWRPDSAGQFASVSGDGSVAIVDALRPSSSPVLQFQAHESEILTVDWDKYDTNIVVTGAVDGSIRGWDVRMVEAVSPNNPRPLFALTGHTYGIRRLKCSPHTSGVIASVSYDMTLRLWNARAVMGPPSPPSGQSSLLPSCAPGTLCDPRGGLLETLQLHSEFVVGIDFNIFREGEVADCSWDQSTVTCFPQSLARNASPML* # PASA_UPDATE: g786.t1, single gene model update, valid-1, status:[pasa:asmbl_8818,status:12],[pasa:asmbl_8820,status:12], valid-1 NODE_676_length_19187_cov_40.4087 . gene 13120 19103 . - . ID=g786;Name=g786.t1 NODE_676_length_19187_cov_40.4087 . mRNA 13120 19103 . - . ID=g786.t1;Parent=g786;Name=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 18113 19103 . - . ID=g786.t1.exon1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 18113 19103 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 17609 17694 . - . ID=g786.t1.exon2;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 17609 17694 . - 2 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 16886 17494 . - . ID=g786.t1.exon3;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 16886 17494 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 16464 16577 . - . ID=g786.t1.exon4;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 16464 16577 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 16124 16215 . - . ID=g786.t1.exon5;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 16124 16215 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 15896 15977 . - . ID=g786.t1.exon6;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 15896 15977 . - 1 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 15584 15672 . - . ID=g786.t1.exon7;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 15584 15672 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 15344 15406 . - . ID=g786.t1.exon8;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 15344 15406 . - 1 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 14998 15136 . - . ID=g786.t1.exon9;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 14998 15136 . - 1 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 14689 14769 . - . ID=g786.t1.exon10;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 14689 14769 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 14371 14478 . - . ID=g786.t1.exon11;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 14371 14478 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 14103 14243 . - . ID=g786.t1.exon12;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 14103 14243 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . exon 13120 13890 . - . ID=g786.t1.exon13;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . CDS 13747 13890 . - 0 ID=cds.g786.t1;Parent=g786.t1 NODE_676_length_19187_cov_40.4087 . three_prime_UTR 13120 13746 . - . ID=g786.t1.utr3p1;Parent=g786.t1 #PROT g786.t1 g786 MVVDGAEKMVSSYRSQGDRKNQAMAEAKLMESKTKCHHIKMELQLRETPLAGPFGADWVDEEQRHSFLARRLEVERYVAAGASKMASVCPPSSATDKSALALQASVASQRTILLEKALGSRSLRRTSADAGAASSASLAAVSSGSASSASQQHKEGVLLTGRLSVTIESTQGLTAGERYLIVLKVDGHDTVTIKPKTTLQGRPRQAAFRIERARELQVELVSVGGGSVRLVAIAAVRLAPLAQSARGKPHACVLDLEPRSSGSVALTAQFDTESAEADTRGIRRRNALTMHRAHCTKGHKLVSTSFYAITRCAICSNGLLSAGKSGLQCEKCNLTCHKACLNNILSQCTASIVPESDESASSLVLSSGSISSTASPRKASNRLGHSIPHKFVSHAGLGRFCCQCGSLVFGLGRKCEECGIACHRRCEPNVPAHCGMTQELAYSLAFYERASQLNESRASGGSVSDVDSLASSSHSQLALSSSAPPSALAHEDAGTQAVERKASNSPSAGPDALGVASSEDASADGDSQPQPQPVTPVKPMHLSASAASFAKLAYIAQNPASADVLSIASETSSVVPQWDHKVTIDDFTIISVLGRGHFGKVVLAESKTGKELYAIKALKKGYYLERDEVESVASERQIFQVVDRNPFLVNLYCTFQTEDYAFFVMEYAAGGDLMMYVRMRIFPEEIARFYSAEVLLALDFLHKNNIIYRDLKLDNILMSRDGHIKLADFGLCKVNAAPDERTWTFCGTPEFMAPELLLELGHTRAVDWWAFGVLLFQMMVGESPYPGERPEEVLGGIMRGPVSFPLKMSWDAQNIIMKLLNQDPLKRLGSTSKDAEDIKVHAYFKKISWEKMERREVQPPIVPQLSSRLDVRYFEDDFTSETPQFSLLSEIAEDPDDMFEGFSYKATWLSGL* # PASA_UPDATE: g782.t1, single gene model update, valid-1, status:[pasa:asmbl_8821,status:12], valid-1 NODE_676_length_19187_cov_40.4087 . gene 117 3089 . + . ID=g782;Name=g782.t1 NODE_676_length_19187_cov_40.4087 . mRNA 117 3089 . + . ID=g782.t1;Parent=g782;Name=g782.t1 NODE_676_length_19187_cov_40.4087 . exon 117 1697 . + . ID=g782.t1.exon1;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . CDS 117 1697 . + 0 ID=cds.g782.t1;Parent=g782.t1;5_prime_partial=true NODE_676_length_19187_cov_40.4087 . exon 1812 1874 . + . ID=g782.t1.exon2;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . CDS 1812 1874 . + 0 ID=cds.g782.t1;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . exon 2101 2258 . + . ID=g782.t1.exon3;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . CDS 2101 2258 . + 0 ID=cds.g782.t1;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . exon 2447 3089 . + . ID=g782.t1.exon4;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . CDS 2447 2804 . + 1 ID=cds.g782.t1;Parent=g782.t1 NODE_676_length_19187_cov_40.4087 . three_prime_UTR 2805 3089 . + . ID=g782.t1.utr3p1;Parent=g782.t1 #PROT g782.t1 g782 VLVDDKGLVFHLAFGLPGCARGNDVTHAVLALCVIRDTLVQMGVKISIGITTGVVFCGAIGTSTRREYTQHGDDVNVAARFMTTAEDNDILCDDATRLSCSAAAIGFEPLGKVHLKGKTDEVAIFRPHQLRQPTTPEAILVVQQRRHQHIVYLKGGLLAPDEEMPYLGRAAVFDRVDGLLMRVRMADLTPDDIASGRRRVSQSSAKGSAPAALAGIAPDVDVTYLGTVGVHDEEDRGNDLVILEGTTGVGKSDVLRHLYLRHVGQNAGTVLWTGQQESQPVERYLALRAWRPILHQLFDLNLPGEKRGAMVALHDTLEAVMPGTGKHAFFIISYFADEDTGVSFLSAAIRELLQDDQYGAVFLECLASVIAGRMQALAEADELGRRTLVLIDDFDVFGDDSAGLLQALTSIPCDAVFVVTSRVNKSDRLSRVGSPSRRLHTFRLNGLVDADMTTLVCIRLHARELSTDLRQWLLDTSEGNPRVADVLVCRLRVSGDISVYGDRAVWSENAATKLLYEGAGVIQFASETFGLAVGRIDSLSASQRTTLKVASVIGRAFMFDLLRNLLANVPGSTHIFDDLEALENLRLIQRVSKKGTSLTYRFVSPLILRVAYEMAPYSQRKAIHRDIAVWYEHVFAHDLPRYYRELAYHWGRTDDPARELEFLIRSGQAQSSPDLQELVDRECELNRQLKALEKERRKIIEARRGVQQKLVANFQITKE* # PASA_UPDATE: g785.t1, single gene model update, valid-1, status:[pasa:asmbl_8823,status:3], valid-1 NODE_676_length_19187_cov_40.4087 . gene 9554 12777 . + . ID=g785;Name=g785.t1 NODE_676_length_19187_cov_40.4087 . mRNA 9554 12777 . + . ID=g785.t1;Parent=g785;Name=g785.t1 NODE_676_length_19187_cov_40.4087 . five_prime_UTR 9554 9598 . + . ID=g785.t1.utr5p1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 9554 9748 . + . ID=g785.t1.exon1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 9599 9748 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 10005 10061 . + . ID=g785.t1.exon2;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 10005 10061 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 10383 10493 . + . ID=g785.t1.exon3;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 10383 10493 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 10646 10721 . + . ID=g785.t1.exon4;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 10646 10721 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 11050 11174 . + . ID=g785.t1.exon5;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 11050 11174 . + 2 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 11318 11434 . + . ID=g785.t1.exon6;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 11318 11434 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 11626 11700 . + . ID=g785.t1.exon7;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 11626 11700 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 11934 12031 . + . ID=g785.t1.exon8;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 11934 12031 . + 0 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . exon 12288 12777 . + . ID=g785.t1.exon9;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . CDS 12288 12519 . + 1 ID=cds.g785.t1;Parent=g785.t1 NODE_676_length_19187_cov_40.4087 . three_prime_UTR 12520 12777 . + . ID=g785.t1.utr3p1;Parent=g785.t1 #PROT g785.t1 g785 MHEDEGSTAASGHGAALVCACYFSRNIFVHSVGIHVTYVNDAQFHREYAKVLREKGIATATQFDAVVLAVKGEIDRRRNVGGDRVRARVSIAKHYAPLHRSVYHLEDHYLDDALATLIVGDCCRSCPYVTICSGIYAFPFFKPHFCRTLLAELHHFARSGMPHGQPNSMNKHGLLFFELGFDDGLVMPLVHRCLEPLRRKFYPASTPIDSCKAFTVVYSSNAPDADRQLAPHFDNSEVTLNICLQTTGADAGSLYFVDDATDTCVEWVHREGWAVLHLGSAMHGASQVGSQMTHGGGDDGVTSAGRTNLVMWGRSSQTRNKRCPMCSQRPVLVETEGPGDGFTRKG* # PASA_UPDATE: g784.t1, single gene model update, valid-1, status:[pasa:asmbl_8822,status:3], valid-1 NODE_676_length_19187_cov_40.4087 . gene 5606 9248 . + . ID=g784;Name=g784.t1 NODE_676_length_19187_cov_40.4087 . mRNA 5606 9248 . + . ID=g784.t1;Parent=g784;Name=g784.t1 NODE_676_length_19187_cov_40.4087 . five_prime_UTR 5606 5607 . + . ID=g784.t1.utr5p1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 5606 6052 . + . ID=g784.t1.exon1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 5608 6052 . + 0 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 6313 6423 . + . ID=g784.t1.exon2;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 6313 6423 . + 2 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 6662 6704 . + . ID=g784.t1.exon3;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 6662 6704 . + 2 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 6984 7053 . + . ID=g784.t1.exon4;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 6984 7053 . + 1 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 7310 7427 . + . ID=g784.t1.exon5;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 7310 7427 . + 0 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 7622 7701 . + . ID=g784.t1.exon6;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 7622 7701 . + 2 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 8029 8186 . + . ID=g784.t1.exon7;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 8029 8186 . + 0 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 8344 8367 . + . ID=g784.t1.exon8;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 8344 8367 . + 1 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 8694 8751 . + . ID=g784.t1.exon9;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 8694 8751 . + 1 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . exon 8915 9248 . + . ID=g784.t1.exon10;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . CDS 8915 9082 . + 0 ID=cds.g784.t1;Parent=g784.t1 NODE_676_length_19187_cov_40.4087 . three_prime_UTR 9083 9248 . + . ID=g784.t1.utr3p1;Parent=g784.t1 #PROT g784.t1 g784 MRQRACPAFRPPMILSALSRQGAALCRVTLGAPLRTTTDALLRGPISSASHLPWISTRQTLHSLCTKQQLPVTPVFVRFQSSLALSARAVTSGLATSASSLASHCGNGVVVRRIVPNSLCSMPSVGRGGGHVRRFRVRRQGYEYFDNEEPFSIVDFLRRRWLFIAFPGVGFGYYYVSHLEPVPISGRRRFMNVTAAEELRMGEVAYKDILAKYAGRILPQSHPLTKMVRSIGERIVAVSELKGLNWEFIVVDAPDINCFVLPGGKVFVFTGILPILQTPDGMAAVLGHEIAHQVARHSAEKLSFAKILVVLQLLFAMVIDTSSLVRTILFRFGLEMPFSRKCETEADYIGLLLMGKACFEPAEAIDVWKRMAVAQANNAPPEYLSTHPSSERRMENIEKWLPEAQRERNQHCDMGEPLRSFLRW* # PASA_UPDATE: g11716.t1, single gene model update, valid-1, status:[pasa:asmbl_8349,status:12], valid-1 NODE_5909_length_683_cov_392.844 . gene 76 683 . - . ID=g11716;Name=g11716.t1 NODE_5909_length_683_cov_392.844 . mRNA 76 683 . - . ID=g11716.t1;Parent=g11716;Name=g11716.t1 NODE_5909_length_683_cov_392.844 . five_prime_UTR 683 683 . - . ID=g11716.t1.utr5p1;Parent=g11716.t1 NODE_5909_length_683_cov_392.844 . exon 626 683 . - . ID=g11716.t1.exon1;Parent=g11716.t1 NODE_5909_length_683_cov_392.844 . CDS 626 682 . - 0 ID=cds.g11716.t1;Parent=g11716.t1;5_prime_partial=true NODE_5909_length_683_cov_392.844 . exon 76 450 . - . ID=g11716.t1.exon2;Parent=g11716.t1 NODE_5909_length_683_cov_392.844 . CDS 109 450 . - 0 ID=cds.g11716.t1;Parent=g11716.t1 NODE_5909_length_683_cov_392.844 . three_prime_UTR 76 108 . - . ID=g11716.t1.utr3p1;Parent=g11716.t1 #PROT g11716.t1 g11716 NGFTEDYGVGFEDYEFLAKVTVTHSKLEVISEPLHWYRKNGESMSSLASLQKSRARYLRAFENETDLADIVRHVRKLYAVSEAPKGRSFASLVMWAVATVVFGLVAMRYSVNIARLVGQSVPPMPHPHGAWR* # ORIGINAL: g6429.t1 original gene structure, not modified by PASA NODE_3253_length_3911_cov_35.8058 AUGUSTUS gene 119 3763 . + . ID=g6429;Name=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS mRNA 119 3763 . + . ID=g6429.t1;Parent=g6429;Name=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 119 259 . + . ID=g6429.t1.exon1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 119 259 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 679 777 . + . ID=g6429.t1.exon2;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 679 777 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 991 1418 . + . ID=g6429.t1.exon3;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 991 1418 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 1608 1788 . + . ID=g6429.t1.exon4;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 1608 1788 . + 1 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 2101 2199 . + . ID=g6429.t1.exon5;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 2101 2199 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 2565 2687 . + . ID=g6429.t1.exon6;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 2565 2687 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 2961 3287 . + . ID=g6429.t1.exon7;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 2961 3287 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS exon 3506 3763 . + . ID=g6429.t1.exon8;Parent=g6429.t1 NODE_3253_length_3911_cov_35.8058 AUGUSTUS CDS 3506 3763 . + 0 ID=cds.g6429.t1;Parent=g6429.t1 #PROT g6429.t1 g6429 PGSSGTCGGGSYGVYLYESPSASVTHSVIVVSDAGRGGHGSLGQLGGPGGVGGASGPYGGSKQGSGSYGGSGGNGGTGGAGGDGAPGYGGSSIGVLFAAASLSDAASLGVACNHVEVGGAGDAGRVGDRHFSGMAGISSECYVTNGTNGVVVACSELCYDADANCPTDSDVVCDACGVCGGRNETCTGCDGELFSGLVRDDCGVCNGNGSSCAGCDGRPNSKMSLDVCGVCGGNGATCASLVASTASISDYAGVVVSYGLSLASDSRSVVDVTCVSNDESVVTFIGGGESLEYYVRRNDTLYFALHEPGSAVVTCTAHGGEYSGKTADVVVHVTFPRLVLSPRSLIGFAASVGERGDIASLTVSANLTRDIYVVCESSNTTIATLFPAHNRTEWLYFGDGIRLLLKAFNVTASTAHGDSKTSSVSESDVIGIQFLAPGTSEISCAAWLESYSAGVVGVVVVSNARPVVPAVVVPTITTRKGANGGAVAGAVVGTGVGVAALLFGIAYYRRRRKQMNGYSTFELDGGSRMDDAADGALEGASADADAYANDAH # PASA_UPDATE: g9669.t1, single gene model update, valid-1, status:[pasa:asmbl_249,status:12], valid-1 NODE_1068_length_14249_cov_38.7446 . gene 9063 12103 . + . ID=g9669;Name=g9669.t1 NODE_1068_length_14249_cov_38.7446 . mRNA 9063 12103 . + . ID=g9669.t1;Parent=g9669;Name=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 9063 9165 . + . ID=g9669.t1.exon1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 9063 9165 . + 0 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 9518 9592 . + . ID=g9669.t1.exon2;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 9518 9592 . + 2 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 9824 9918 . + . ID=g9669.t1.exon3;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 9824 9918 . + 2 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 10143 10244 . + . ID=g9669.t1.exon4;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 10143 10244 . + 0 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 10426 10554 . + . ID=g9669.t1.exon5;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 10426 10554 . + 0 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 10706 10869 . + . ID=g9669.t1.exon6;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 10706 10869 . + 0 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 11263 11377 . + . ID=g9669.t1.exon7;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 11263 11377 . + 1 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . exon 11759 12103 . + . ID=g9669.t1.exon8;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . CDS 11759 11896 . + 0 ID=cds.g9669.t1;Parent=g9669.t1 NODE_1068_length_14249_cov_38.7446 . three_prime_UTR 11897 12103 . + . ID=g9669.t1.utr3p1;Parent=g9669.t1 #PROT g9669.t1 g9669 MASADAADAAPSYRFAFTKLAYPGPFEFLHKECKDVFTLPYLIDGAKLVVNKPVNNNFQVSHTIALGGAVAPPSYHFGATYVGTKRSGPGEQYPIILGDVDTDGNLIAQAIHELAPGLKGKFQAQTQGPNWGVQWEADYKGGDFHASVKAINPNLIDNNGIVIANYLQSVTENVSVGGEFMLQYNGPMRESGFSAALRYRGKDFVATANASPAGAAQATYVHRVNEKVSVGAELECNLRSMESIVTAGYHFDLRQSSFRGQIDSGGVVSAVLEQKMAPGISFLMTGSIDHSKGQSRFGMGLNIGGQ* # PASA_UPDATE: g9667.t1, single gene model update, valid-1, status:[pasa:asmbl_248,status:12], valid-1 NODE_1068_length_14249_cov_38.7446 . gene 159 763 . + . ID=g9667;Name=g9667.t1 NODE_1068_length_14249_cov_38.7446 . mRNA 159 763 . + . ID=g9667.t1;Parent=g9667;Name=g9667.t1 NODE_1068_length_14249_cov_38.7446 . exon 159 343 . + . ID=g9667.t1.exon1;Parent=g9667.t1 NODE_1068_length_14249_cov_38.7446 . CDS 159 343 . + 0 ID=cds.g9667.t1;Parent=g9667.t1;5_prime_partial=true NODE_1068_length_14249_cov_38.7446 . exon 598 763 . + . ID=g9667.t1.exon2;Parent=g9667.t1 NODE_1068_length_14249_cov_38.7446 . CDS 598 721 . + 1 ID=cds.g9667.t1;Parent=g9667.t1 NODE_1068_length_14249_cov_38.7446 . three_prime_UTR 722 763 . + . ID=g9667.t1.utr3p1;Parent=g9667.t1 #PROT g9667.t1 g9667 SYDIKYKQKVTTEDMFLGLGGRDNSSTSCDEMTVRVSLPDTKYADVTLDVTDTFLDCRTPKNKLGLYLPHTVNSKNGSAKWESDTCTLVVTLPIVRELDFMR* # PASA_UPDATE: g9668.t1, single gene model update, valid-1, status:[pasa:asmbl_251,status:12], valid-1 NODE_1068_length_14249_cov_38.7446 . gene 936 7263 . - . ID=g9668;Name=g9668.t1 NODE_1068_length_14249_cov_38.7446 . mRNA 936 7263 . - . ID=g9668.t1;Parent=g9668;Name=g9668.t1 NODE_1068_length_14249_cov_38.7446 . exon 7006 7263 . - . ID=g9668.t1.exon1;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . CDS 7006 7263 . - 0 ID=cds.g9668.t1;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . exon 2611 6808 . - . ID=g9668.t1.exon2;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . CDS 2611 6808 . - 0 ID=cds.g9668.t1;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . exon 1440 2395 . - . ID=g9668.t1.exon3;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . CDS 1440 2395 . - 2 ID=cds.g9668.t1;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . exon 936 1110 . - . ID=g9668.t1.exon4;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . CDS 1051 1110 . - 0 ID=cds.g9668.t1;Parent=g9668.t1 NODE_1068_length_14249_cov_38.7446 . three_prime_UTR 936 1050 . - . ID=g9668.t1.utr3p1;Parent=g9668.t1 #PROT g9668.t1 g9668 MGKDKGMRSKGNVRPSNSARAADNLGRAGIPVPTFDALSAANPFLEMSAASNEASVAAGENDFTLDSALRMALSKLTKKDATTKIKAIQELSELFKTLDQAAVCACLPHWPRAYARLCVDTDRRVREGAQGATADLIARTGKASVPHIRGIVPSWIAAQHDPSREVAAAAQKGFLAAFATPAKRAGVVGFCRSEIVELLAAAAVCAKDDVQTGEDPRDADERHERAVASALGGLAYVVECVAGTEHAAPWTDDLALVSSNAKLWKASSTHPSPVVRAAMLSLVSSLVRHARPVVAANAKTVLPAAFSLLGDKSPLSHVAMWDALLACADAFPDSLSAAAGIVPWRKAVLPKLWAFIRGACYGSGASSYGALAQFVARIPKDVIGDGIAFSTELFTSLWAGAVCENSRGVDVLLAFSRCHVALARHFLIDSVAATASDTDDTAPLRVHMAREAVGCACAAALCIPRPGDRRTFPHAELFRLLASVAVSVARGNAEAEAGVALDVRSVGVVRTLWDSIEGAVVAIVTASTTSNVDTDDGVDAASNADTNEPGGEEAQTAQPAQAHASAAAPASAQESTGGATPSKSKRAPVDPLHAPPCALSHAVVERIACLFDALSAASRGTPPLESRVTAIARRVVSAAIGVARNEHASRDAPTQTARMALASSLIAQFGVDGSVLTMDTAVEWLVAAPAPAFAPASLSPASADGKGSSKGTEDASGSLAGALGSVIASLALGSAESTHAASAAPGDVDERRAAWARTAAGLAASSPGALASVLLSLSSRAVDNVMPSWFEGTIDGPVFQLAAAPDVAEDAWHVIAAALGLTVRTRDGAVKPALSHVTLEAVLRRTSAVLHSCVHSAAPATSSDGIVVESTTTNKAAALASLAAKAALVSLSRTCNDDTEDAVVAPIVRDALANVLSGCAVYAVWAAGGDSARHAESVFRDACGATARGNGSLLAFSASCAREIALKSLEFVVACATAEHLAALSRLLLSPECALLFGDGKAASVVAACVGGSAEVWTTAFAAAGPVRFPRELVMGLLPLSKETPLWEEDVVHISAKSGVAGSVTADPSAVDSGERLGRMAAFAAQLVSTATLQSVLASGGDYNATRQCALCVLNIARALQWRKGVARSPGNWAFESAESALKDAVSSAGGAGVLVSEPVFGEIAALALADGADDSHACALSILLSLCASINTIDDDAAKRLVKVLVALSREASVQALTLCAMCVGVIARVCTARTLSPLAADVAESAGSAADPRGAQLCIAASAMLDALAAAGEPAEAAALSGRLLDRLSAWAGSVKDGLPLCAHTAIARVTCSLLGASEGRVYTQRLQFIGGMLLRWLGSVEQGTASMYGHSRAFVAYAGDVMSLFVRHQRLVPFESAEWKSFADPAWDAALVRFLADAYALAMRGSPLPSASFTLERLSEAVAGCTDAVLSARRASYLRTCQLLMANNSGVQRCAHALATRLATWEIRALAADDGQSQRAQGEGGDVTATRSPPRPLLDNLAAWEADPSNRHAQYGAMLTWLVLLGYFRGVSPSLRSEYLASVRDSGKIDRMLSLAASHLPLSQFVGGPAPPSSASGVFSAGTDAVPAPDADQCIRDSSSRRLAPLAALLYYRALRDIPALVRAWWASCDRQQAAAVERYTAKKASPPLILGEIRAVQAQQQSSESAGAAAAALAASSMKVRASVATAEVVATYTVDEISVELVVRLPSSYPLRPPDVTTGSRVGANEAQWRKWLLQLTVFLASQNGSIAEGLSLWRQNVDKRFEGVEECTICYAVINATNYQLPSLRCKTCKNKFHSACLYKWFSTSGNATCPLCRNIF* # PASA_UPDATE: g9670.t1, single gene model update, valid-1, status:[pasa:asmbl_250,status:12], valid-1 NODE_1068_length_14249_cov_38.7446 . gene 12730 14130 . + . ID=g9670;Name=g9670.t1 NODE_1068_length_14249_cov_38.7446 . mRNA 12730 14130 . + . ID=g9670.t1;Parent=g9670;Name=g9670.t1 NODE_1068_length_14249_cov_38.7446 . five_prime_UTR 12730 12913 . + . ID=g9670.t1.utr5p1;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . exon 12730 13113 . + . ID=g9670.t1.exon1;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . CDS 12914 13113 . + 0 ID=cds.g9670.t1;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . exon 13359 13494 . + . ID=g9670.t1.exon2;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . CDS 13359 13494 . + 1 ID=cds.g9670.t1;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . exon 13802 14015 . + . ID=g9670.t1.exon3;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . CDS 13802 14015 . + 0 ID=cds.g9670.t1;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . exon 14108 14130 . + . ID=g9670.t1.exon4;Parent=g9670.t1 NODE_1068_length_14249_cov_38.7446 . CDS 14108 14130 . + 2 ID=cds.g9670.t1;Parent=g9670.t1 #PROT g9670.t1 g9670 MGTVELASIAAVASSVVYAPSPVAINVLISTCGFFATLRLIPAMCDLFVAAGLFGIDLNKDTKDVKVPEAIGVVVAAVYLICMFLFIPIPFVMEWYTKSGDVLALTPFPHDEFVYFISALLSICCMIFLGFADDVLNLKWRHKLFLPTVATLPLLMVYFVNIGSTTVVVPRPLQFALGSTVDLGRWCVKA* # ORIGINAL: g6958.t1 original gene structure, not modified by PASA NODE_3882_length_2575_cov_35.5772 AUGUSTUS gene 1375 1752 . + . ID=g6958;Name=g6958.t1 NODE_3882_length_2575_cov_35.5772 AUGUSTUS mRNA 1375 1752 . + . ID=g6958.t1;Parent=g6958;Name=g6958.t1 NODE_3882_length_2575_cov_35.5772 AUGUSTUS exon 1375 1414 . + . ID=g6958.t1.exon1;Parent=g6958.t1 NODE_3882_length_2575_cov_35.5772 AUGUSTUS CDS 1375 1414 . + 0 ID=cds.g6958.t1;Parent=g6958.t1 NODE_3882_length_2575_cov_35.5772 AUGUSTUS exon 1580 1752 . + . ID=g6958.t1.exon2;Parent=g6958.t1 NODE_3882_length_2575_cov_35.5772 AUGUSTUS CDS 1580 1752 . + 2 ID=cds.g6958.t1;Parent=g6958.t1 #PROT g6958.t1 g6958 MAKIEQLVRGCLPAVFHGGGARRPKVGVLSRLVYLDDVIVMFSASFEKHLEDVEKVFFATGECRRQAAAK* # ORIGINAL: g13906.t1 original gene structure, not modified by PASA NODE_1540_length_10609_cov_36.7043 AUGUSTUS gene 1662 9722 . - . ID=g13906;Name=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS mRNA 1662 9722 . - . ID=g13906.t1;Parent=g13906;Name=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 9472 9722 . - . ID=g13906.t1.exon1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 9472 9722 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 8872 9316 . - . ID=g13906.t1.exon2;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 8872 9316 . - 1 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 8225 8285 . - . ID=g13906.t1.exon3;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 8225 8285 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 7290 7860 . - . ID=g13906.t1.exon4;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 7290 7860 . - 2 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 6740 6932 . - . ID=g13906.t1.exon5;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 6740 6932 . - 1 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 6080 6460 . - . ID=g13906.t1.exon6;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 6080 6460 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 5421 5902 . - . ID=g13906.t1.exon7;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 5421 5902 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 5017 5157 . - . ID=g13906.t1.exon8;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 5017 5157 . - 1 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 4683 4764 . - . ID=g13906.t1.exon9;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 4683 4764 . - 1 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 3895 3981 . - . ID=g13906.t1.exon10;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 3895 3981 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 3550 3583 . - . ID=g13906.t1.exon11;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 3550 3583 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 3042 3161 . - . ID=g13906.t1.exon12;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 3042 3161 . - 2 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 2727 2794 . - . ID=g13906.t1.exon13;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 2727 2794 . - 2 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 2271 2333 . - . ID=g13906.t1.exon14;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 2271 2333 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS exon 1662 1796 . - . ID=g13906.t1.exon15;Parent=g13906.t1 NODE_1540_length_10609_cov_36.7043 AUGUSTUS CDS 1662 1796 . - 0 ID=cds.g13906.t1;Parent=g13906.t1 #PROT g13906.t1 g13906 MLRMVVTGNLRGNADSFVGTDALYGGYSRIAMGVHDATNNASDSAFVLRLDIGNWLGTTLFDQVHSGKLTLEIFTNSLLFHVKSLSHGDFQQGPDILADTLAAVPGTTVLSNARFATYHRLSTLVNRYAVVNVTSVAGETLSVGVVSYASVDLCTFGVCYDGSGPLLKMLDPAESVQSAISEMKRVHPYVSVVVCAVNLPPPIGVSVLAGVAAKITGVHVYAVAGLHLSGVPDLIYPSPAGPYPMSIPTADVGFSAALFSSTDYRYLTIADVSLGMSSPIGAMQSVTLSGQGPLAIRNCSALAIANNLTCTRTVDASVQTVVDVGNSVVTTYKVGRVGATVSAVNGALVSCRATECTMGNLLADAMRWRTGGLCDVAIFGVGSIRASFAVGNITIANVLDVVRFRNTISIVTMTGKGLVVALENSVSIVPRNISGTWPSGSGRFSQVSGMRFTYDNRKAPYNGRIIRAAILGENGTYDTLHANRLYKICMLDFVRFGGDNYTVFTNNAYAFNPYDYGPETQSMAIAYVTERSPINITLEGRITIDNNYTSLSICELYADDSSCLPAVVEPVSGGGSLGPTVYVPIAIGGAIALVAVFAILLYLRKNLNVQKHMKERRNVIKQYIALSELEFGRELGRGAAGVVYLGLWRNTTVAIKKCKRLQDWFEGDYGGANTPKETNDGMRSPKSARMHVAHAIFGQTGSGLSGMGSHPPSPRAGKTNNGSADTSGQTTPNWALSAHTLGYSMQARRAVEMGRQNVLDSFTSLRLIKSSSTGERNAERSGTRYSFEAEIAIMCNLRHPALLLYIGMVPSPNLCVVTEFMPNGSLRSCIDNPYVVLPWTTRFNISLDIARGMSYLHLHDPPIFHCDLKIGDFGMTQSKAVLCGAAQRVGTLFWMAPEVLKGMRFTEKSDVFSFGVTVWELVTRKFPYADHSLLTGSDLDLLLDHIVNEGTRPTAFEMPSGYAALLSRCWKQDDTRRPSFPDLLHELELQVAEDNPMWSGEEDEVPSDCHDDCDDDCDDDDSRADTEFKGDVDPPWP* # PASA_UPDATE: g13905.t1, single gene model update, valid-1, status:[pasa:asmbl_1914,status:12], valid-1 NODE_1540_length_10609_cov_36.7043 . gene 140 1199 . + . ID=g13905;Name=g13905.t1 NODE_1540_length_10609_cov_36.7043 . mRNA 140 1199 . + . ID=g13905.t1;Parent=g13905;Name=g13905.t1 NODE_1540_length_10609_cov_36.7043 . five_prime_UTR 140 171 . + . ID=g13905.t1.utr5p1;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . exon 140 267 . + . ID=g13905.t1.exon1;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . CDS 172 267 . + 0 ID=cds.g13905.t1;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . exon 478 624 . + . ID=g13905.t1.exon2;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . CDS 478 624 . + 0 ID=cds.g13905.t1;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . exon 964 1199 . + . ID=g13905.t1.exon3;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . CDS 964 1092 . + 0 ID=cds.g13905.t1;Parent=g13905.t1 NODE_1540_length_10609_cov_36.7043 . three_prime_UTR 1093 1199 . + . ID=g13905.t1.utr3p1;Parent=g13905.t1 #PROT g13905.t1 g13905 MYHLFQNALMFNAEDHDVHMMALEMRDDVTEQVMEFMRTEALMHQEQLNELESALNQSNGASVERASRGRSAAAESKETPKGEEGGRRTRSRPTDEEGSAAKSNPPSAKRRRTGRGAQDEDAA* # ORIGINAL: g6395.t1 original gene structure, not modified by PASA NODE_4224_length_1988_cov_36.0225 AUGUSTUS gene 129 1889 . + . ID=g6395;Name=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS mRNA 129 1889 . + . ID=g6395.t1;Parent=g6395;Name=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS exon 129 278 . + . ID=g6395.t1.exon1;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS CDS 129 278 . + 0 ID=cds.g6395.t1;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS exon 632 817 . + . ID=g6395.t1.exon2;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS CDS 632 817 . + 0 ID=cds.g6395.t1;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS exon 1108 1225 . + . ID=g6395.t1.exon3;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS CDS 1108 1225 . + 0 ID=cds.g6395.t1;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS exon 1629 1768 . + . ID=g6395.t1.exon4;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS CDS 1629 1768 . + 2 ID=cds.g6395.t1;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS exon 1887 1889 . + . ID=g6395.t1.exon5;Parent=g6395.t1 NODE_4224_length_1988_cov_36.0225 AUGUSTUS CDS 1887 1889 . + 0 ID=cds.g6395.t1;Parent=g6395.t1 #PROT g6395.t1 g6395 VRELDQYLLDHKCPLDFRRKVLDYYAHKYQSKKMYNDKEVLADLSENLRSELMLYKCASLVTCVPFLCLGDLAFVASVVSKMEPCVFMTGDVIIEEGAVGKEMYFIEKGIVEIFKSLQSKDVFGRSISNVEGMPADTEVITATLCDGSFFGEIALLSPKVRRAASVRAVIPCNCYRLTHTDLANILRDYPAMRAYLNE* # PASA_UPDATE: g7621.t1, single gene model update, valid-1, status:[pasa:asmbl_6371,status:12],[pasa:asmbl_6372,status:12], valid-1 NODE_365_length_25876_cov_40.5376 . gene 8938 10078 . - . ID=g7621;Name=g7621.t1 NODE_365_length_25876_cov_40.5376 . mRNA 8938 10078 . - . ID=g7621.t1;Parent=g7621;Name=g7621.t1 NODE_365_length_25876_cov_40.5376 . five_prime_UTR 9947 10078 . - . ID=g7621.t1.utr5p1;Parent=g7621.t1 NODE_365_length_25876_cov_40.5376 . exon 9769 10078 . - . ID=g7621.t1.exon1;Parent=g7621.t1 NODE_365_length_25876_cov_40.5376 . CDS 9769 9946 . - 0 ID=cds.g7621.t1;Parent=g7621.t1 NODE_365_length_25876_cov_40.5376 . exon 8938 9451 . - . ID=g7621.t1.exon2;Parent=g7621.t1 NODE_365_length_25876_cov_40.5376 . CDS 9306 9451 . - 2 ID=cds.g7621.t1;Parent=g7621.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 8938 9305 . - . ID=g7621.t1.utr3p1;Parent=g7621.t1 #PROT g7621.t1 g7621 MPLVRNSTRKKLALADQRKAEEDGDADDAVCTWVGKGFAAGGGRTEYRRFVRNGDEFRVGSTSCLLLVVNGSVQFGGSPKKPFHQSFVLMQDASSTYFVATDAMRFT* # ORIGINAL: g7625.t1 original gene structure, not modified by PASA NODE_365_length_25876_cov_40.5376 AUGUSTUS gene 18922 21466 . + . ID=g7625;Name=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS mRNA 18922 21466 . + . ID=g7625.t1;Parent=g7625;Name=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 18922 19150 . + . ID=g7625.t1.exon1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 18922 19150 . + 0 ID=cds.g7625.t1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 19307 19497 . + . ID=g7625.t1.exon2;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 19307 19497 . + 2 ID=cds.g7625.t1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 19791 19836 . + . ID=g7625.t1.exon3;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 19791 19836 . + 0 ID=cds.g7625.t1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 20108 20174 . + . ID=g7625.t1.exon4;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 20108 20174 . + 2 ID=cds.g7625.t1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 20281 21026 . + . ID=g7625.t1.exon5;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 20281 21026 . + 1 ID=cds.g7625.t1;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 21318 21466 . + . ID=g7625.t1.exon6;Parent=g7625.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 21318 21466 . + 2 ID=cds.g7625.t1;Parent=g7625.t1 #PROT g7625.t1 g7625 MSAPATAAGVLTSHHGTAAATPASHGGAASYPLHRLVFEGRADELRRLLASRKHDVNERDTAGNPPLVLAAILGRTECLSLLLAAGAAVRVKSKSGWSALGESVSRGARDDIRTLYVALKEQAKAQMKARMPEIVRQIQMIGDFELTLKWDFHSWVPLVSRLLPCDTCKVYKRGATLRLDTTLTEFTDMRWHRGSVSYLISLSPDGRESVVVLDNVRHVYAPAETESSDPGAIEDDVDVLMSADVASASLPPSQIVFDPVRGGLFGTGAPREEPIGGHLARVYHVANAVLFQRKRREHLTPADIARNKRMFASITGGGGGEPHPHSVDGDTPRRPSLEPPPPPAISFDEYLARAPGDRVRLGIGRPVIVKESSRTFKPTVWMSDTFPLRMDQLRPLLELLAQTNKHFERLSDFLDNKLPPGFPVKMEMPMFPTVTVTVTFEGFRSTTPDKALFHVPPGFARATGEFRPASHATNS* # ORIGINAL: g7620.t1 original gene structure, not modified by PASA NODE_365_length_25876_cov_40.5376 AUGUSTUS gene 6838 8490 . + . ID=g7620;Name=g7620.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS mRNA 6838 8490 . + . ID=g7620.t1;Parent=g7620;Name=g7620.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 6838 7134 . + . ID=g7620.t1.exon1;Parent=g7620.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 6838 7134 . + 0 ID=cds.g7620.t1;Parent=g7620.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 7486 8490 . + . ID=g7620.t1.exon2;Parent=g7620.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 7486 8490 . + 0 ID=cds.g7620.t1;Parent=g7620.t1 #PROT g7620.t1 g7620 MAGHSSSRRSSLTVRTVSIASGAVAVILIFFCATGVCAAAPSSESAGESSAINTQSTRNSADEDAAALTQTTQDNVELSLPNSAQGDHETITRRAAPTYPHCKTLQNHLVAYQAIIQSIETDIDTAVAVAQDIVDINDQLVAAQDDVCGLMHALSAVNDLGVLLGKLPYVGDVLLAMSAAANAMLPAAQTLCSALGDLETIVKDPAEAAGEIVDGAEAIKEKLDVISDSCGTAITLVSRAELVGSQICALPLNTGCGYVVTGMVAGEAVVKDAAQKLQSVIDAAPEVTEILSTLASISSQADSALRSLQDTIGILNTLSPYLDYIPSCTPAIPSECENIPYPCGTTWVCCGKVFGHCVCTYPNPKICYSNVCTPYVPPVCTPSLDMWMRTLGITIPTLPGIDFLNVNVPGFPSIAFPESLLTLNIALPTCILG* # PASA_UPDATE: g7622.t1, single gene model update, valid-1, status:[pasa:asmbl_6368,status:3], valid-1 NODE_365_length_25876_cov_40.5376 . gene 10272 14417 . - . ID=g7622;Name=g7622.t1 NODE_365_length_25876_cov_40.5376 . mRNA 10272 14417 . - . ID=g7622.t1;Parent=g7622;Name=g7622.t1 NODE_365_length_25876_cov_40.5376 . five_prime_UTR 14169 14417 . - . ID=g7622.t1.utr5p1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 14125 14417 . - . ID=g7622.t1.exon1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 14125 14168 . - 0 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 13814 13997 . - . ID=g7622.t1.exon2;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 13814 13997 . - 1 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 13634 13692 . - . ID=g7622.t1.exon3;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 13634 13692 . - 0 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 13436 13504 . - . ID=g7622.t1.exon4;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 13436 13504 . - 1 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 13011 13224 . - . ID=g7622.t1.exon5;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 13011 13224 . - 1 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 12429 12879 . - . ID=g7622.t1.exon6;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 12429 12879 . - 0 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 11828 12164 . - . ID=g7622.t1.exon7;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 11828 12164 . - 2 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . exon 10272 11629 . - . ID=g7622.t1.exon8;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . CDS 10552 11629 . - 1 ID=cds.g7622.t1;Parent=g7622.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 10272 10551 . - . ID=g7622.t1.utr3p1;Parent=g7622.t1 #PROT g7622.t1 g7622 MQSGSYPMPMTGMDGSGGRQHPLIKLDRLKYDDTCLQLNSGTPSPPRLWPKHSTNFDLGGLVAAVNGRPNARFSCSIDQRTAFCITDYRLSEHPIVYASAAFEAMCGYQELEVLGRNCRFLQGAATDRRAVEAIKKAVVSGEEGQFDIVNYKKSGEMFMNHLLLVPIRMGRKKELVYMLGIQSSTPFPVVEQSPRWMGPILPIYGMGATGGASQGHMPPPTMQHPGMFQAPQAYQPTVHMQQQQQHHQQVQQLQLQQQQQLQQHQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHMHQQAQLQQHYAPHRAPSPQNTSEKSSSSSFSSGVVSEVSSRFGAPGPYSFAPGYNQAPAGASMRDLAMSSLQRKLRERNDGPDDGDVSMHSLPHTQHVPMSVSSFAAPSAGQVTPFAVPPQKSGSHSQSAQSNSAQQQAQSAQSYGDTMSAYGGGLDSDDRSVAGSQKRSRLYRYESHNAIEKRRRDRINNNLALLATMVPKCREYVYRTNKKLDKAEVLELTVGYIRTLEARIGGGVGRSKGPSSWSLDDVFGWLDSLLLPQYKEAFSSNAVDGPLLVTLSDRDLESELKISNNLHRKKILNALDKLKVQSDVQHAPLRSLDADGDDIMAVEEGNEGSDSSNPDGAVMASGDLREGRTVDASDGRSGSRSWHQGSVSSGVGAAGGSDTSDPNYRYPHERASQRGGHLDSSGNDSSLHSSQRSPSAQAHVQLSPGAPRSEAHAAANTPPVAPSVAAGGSAGGADGSGDDGVIGGGGLAGAASSPVSVGRRWDSAEESRAPDGAQQQQP* # ORIGINAL: g7619.t1 original gene structure, not modified by PASA NODE_365_length_25876_cov_40.5376 AUGUSTUS gene 3577 5343 . - . ID=g7619;Name=g7619.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS mRNA 3577 5343 . - . ID=g7619.t1;Parent=g7619;Name=g7619.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 5275 5343 . - . ID=g7619.t1.exon1;Parent=g7619.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 5275 5343 . - 0 ID=cds.g7619.t1;Parent=g7619.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS exon 3577 4620 . - . ID=g7619.t1.exon2;Parent=g7619.t1 NODE_365_length_25876_cov_40.5376 AUGUSTUS CDS 3577 4620 . - 0 ID=cds.g7619.t1;Parent=g7619.t1 #PROT g7619.t1 g7619 MCAASTAPTMDDSVYGAAQGPETAMRRSREITDSFPQCSRLVEKLQWYTALLDGLEAKLDAFVATAKVIVSTDDAVASAVSDVCGLMHALEHVRQLSIVTSVLPVVGEEISALSATAAAAHTPADVLCSHMQALITAVHAPSVSARKIASTARTFKNKLGVMRSHCESALVTIGRAVSNETTLCSLPVDMGCENAFNKIAATGSLLADATSKIAKVISSERAVNMTFERVEIARTEAEVAIGPVQNAIGTLAGLQHYLKYNPSCSVKTASRCQKVPFPCGVNQQCCGTVKGKCVCKFNESKVCYSDVCTKEVPSACLPQLSEVLSKADVKIPTLPSLDFLSVRIPSLPVVSIPDDLLSLSISLPRCIIAA* # PASA_UPDATE: g7623.t1, single gene model update, valid-1, status:[pasa:asmbl_6373,status:12], valid-1 NODE_365_length_25876_cov_40.5376 . gene 15131 16310 . + . ID=g7623;Name=g7623.t1 NODE_365_length_25876_cov_40.5376 . mRNA 15131 16310 . + . ID=g7623.t1;Parent=g7623;Name=g7623.t1 NODE_365_length_25876_cov_40.5376 . five_prime_UTR 15131 15161 . + . ID=g7623.t1.utr5p1;Parent=g7623.t1 NODE_365_length_25876_cov_40.5376 . exon 15131 16310 . + . ID=g7623.t1.exon1;Parent=g7623.t1 NODE_365_length_25876_cov_40.5376 . CDS 15162 16298 . + 0 ID=cds.g7623.t1;Parent=g7623.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 16299 16310 . + . ID=g7623.t1.utr3p1;Parent=g7623.t1 #PROT g7623.t1 g7623 MANFTLPRISNGGPGEGQFSQGGPIVPGQPTIPGDPRVNHIEDRIARQEKTTRSLLEEAVAIQRELESSFRLVEGTFGSERRGQQLLQDHIRTITTVLRRLNRDVEFLEEFKGRSYDQAKQLQQHVSHVERSSADAYNDLRRRLDLIESSIAKVAVESKNNVDGLALLRAQLEQRHLLLSDEMRKLGEKIDAVRTRQGHSDNEIRQYVRGLEGELFKRLQQVDARGSGIANELHSHIMAAKKEQDVERARVVDALSVRIESMGRTQGDSQTETNRRSDEQVASLKATMERMSADFKLQLEQFSREHDARLTDAASRMQEQRAWTERSVKRAQADVANGLSAVQESLQLSISVLDEKRRLMEEDIRSQLKKIMKTVVVI* # PASA_UPDATE: g7624.t1, single gene model update, valid-1, status:[pasa:asmbl_6369,status:3], valid-1 NODE_365_length_25876_cov_40.5376 . gene 16685 18311 . - . ID=g7624;Name=g7624.t1 NODE_365_length_25876_cov_40.5376 . mRNA 16685 18311 . - . ID=g7624.t1;Parent=g7624;Name=g7624.t1 NODE_365_length_25876_cov_40.5376 . five_prime_UTR 18111 18311 . - . ID=g7624.t1.utr5p1;Parent=g7624.t1 NODE_365_length_25876_cov_40.5376 . exon 17753 18311 . - . ID=g7624.t1.exon1;Parent=g7624.t1 NODE_365_length_25876_cov_40.5376 . CDS 17753 18110 . - 0 ID=cds.g7624.t1;Parent=g7624.t1 NODE_365_length_25876_cov_40.5376 . exon 16685 17654 . - . ID=g7624.t1.exon2;Parent=g7624.t1 NODE_365_length_25876_cov_40.5376 . CDS 16942 17654 . - 2 ID=cds.g7624.t1;Parent=g7624.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 16685 16941 . - . ID=g7624.t1.utr3p1;Parent=g7624.t1 #PROT g7624.t1 g7624 MAADGVSTAKDHASEKHTKTAVRVVMICFFWYFSSACANNVGKSALLRFPFPMTVTLVQLLSISLYMTIVLRVLKVYPQQPITRESYIALILPLALGKIFASVASQVSIWRVPISYAHTVKAIAPIFTVILSRIVLKERQTFKVYLSLVPIIAGIMLATVSEISFDLLGMVSALFSTFVFAIQNIYSKKLMVDRRFDHMNLLLYTSRLAGLILFPVWCLTDAPLMAFSETPIIEGDTSIAWLTLLLVVDGFCNFAQNVMAFSLLSLVSPLSYSVANTTKRIVVILAGVFTFRNSINSTNMVAMAMAIAGVAYYNVAKYEQNVVKHTLPHTGNGGAAKVVSRDAAGVVIQSSTTRIV* # PASA_UPDATE: g7618.t1, single gene model update, valid-1, status:[pasa:asmbl_6375,status:3], valid-1 NODE_365_length_25876_cov_40.5376 . gene 306 3176 . + . ID=g7618;Name=g7618.t1 NODE_365_length_25876_cov_40.5376 . mRNA 306 3176 . + . ID=g7618.t1;Parent=g7618;Name=g7618.t1 NODE_365_length_25876_cov_40.5376 . five_prime_UTR 306 546 . + . ID=g7618.t1.utr5p1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 306 716 . + . ID=g7618.t1.exon1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 547 716 . + 0 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 1084 1104 . + . ID=g7618.t1.exon2;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 1084 1104 . + 1 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 1349 1552 . + . ID=g7618.t1.exon3;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 1349 1552 . + 1 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 2010 2127 . + . ID=g7618.t1.exon4;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 2010 2127 . + 1 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 2274 2504 . + . ID=g7618.t1.exon5;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 2274 2504 . + 0 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . exon 2801 3176 . + . ID=g7618.t1.exon6;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . CDS 2801 2923 . + 0 ID=cds.g7618.t1;Parent=g7618.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 2924 3176 . + . ID=g7618.t1.utr3p1;Parent=g7618.t1 #PROT g7618.t1 g7618 MAESFTAGVEMIQVDVGKMDKSACDVGMDHVKQGVANAGGAPVSTYTFPDTEEHRTGTAEYIKSVVYGGLDGLVSIFVSVVSVAGSSTNIHLILAIGVAKLFAGGFSMGVGDWLSTRADIDFIKAERKRELWELTNYPEGERKEMVEFYVARGLKQETAERIVEIMSQNSEAFVNVMMVEELELNPADEFQSAPKNGLVNFTAFMLFGIVPLFVYIIMYAVGSEAQNTAIGVSTGCTVLFLFLLGAVKGHFTGTSMIKSALITFVCGAVSAAIGFGVSYGLRDYGTVV* # PASA_UPDATE: g7626.t1, single gene model update, valid-1, status:[pasa:asmbl_6370,status:12], valid-1 NODE_365_length_25876_cov_40.5376 . gene 21942 25438 . - . ID=g7626;Name=g7626.t1 NODE_365_length_25876_cov_40.5376 . mRNA 21942 25438 . - . ID=g7626.t1;Parent=g7626;Name=g7626.t1 NODE_365_length_25876_cov_40.5376 . exon 24566 25438 . - . ID=g7626.t1.exon1;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . CDS 24566 25438 . - 0 ID=cds.g7626.t1;Parent=g7626.t1;5_prime_partial=true NODE_365_length_25876_cov_40.5376 . exon 22983 24317 . - . ID=g7626.t1.exon2;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . CDS 22983 24317 . - 0 ID=cds.g7626.t1;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . exon 22544 22666 . - . ID=g7626.t1.exon3;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . CDS 22544 22666 . - 0 ID=cds.g7626.t1;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . exon 21942 22142 . - . ID=g7626.t1.exon4;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . CDS 21993 22142 . - 0 ID=cds.g7626.t1;Parent=g7626.t1 NODE_365_length_25876_cov_40.5376 . three_prime_UTR 21942 21992 . - . ID=g7626.t1.utr3p1;Parent=g7626.t1 #PROT g7626.t1 g7626 VLGSVILDSEQPDLAAIAERASVSELVRLVEFVVGCAINSDRKETYIGRIMSMDAAQQHDLMAVIQRAMSRSRNDSFVSDGALDLSSAAAAGHVGGDGGDGGVRSSLGTVEALLADRREIEGRYEQLRAEHRNLLVMHEQASAERDEMAHRLREATSGAADPKTPAGKAQAGLKAEVERLKEEVDRLEGARDELRAVSESQRTTVSELQQRVDLLGREAAEARQLRDEVEVLRHAAEKAGRLEAQVEAYRRKAEEMQDLRRQLRAAEEQGNTYLQRTMALEDELQKSSGYKSQIDTLKRRLVDAEKQGADSATAVAAANFEAGRLRETVAQLQAQCDRHRAAADEMRERLEEAALGGGMGGMGSAGMGVDVGGAFAADSAVLATMRERMLRLERENDALRSAGTDGTDAPAVRALLDDAQAARSRLERDCAEAVQRAGMLDAECQALRQRMAEAEGVQMRMGDRAIAYEQLAEAERAAARAKSAAESAQSERSQLQATLDVARRELTEAQKELVDLRTRCSLIGLDEREVESRLAAALEAEWTAKMATAVAQSSAEVESLRARVAELEALVVAARNEAERWSAAERVLQRTRGELEAKCGEQTETITRLLVEKDKLHERGTESQERLLDLNRRLVEAQSALQLREEEMRRLRSEAVAAAQLASPAADGAAWQQRLEDERERVHGLEIRLVERDGQLTDRTRRLEEADANVRRLTAQLEERTAEKIKMEGYYEQANKIIQQLKVNGRSSNDQQREFEEALRLMQNTIDERNAEIEFLRENHRKEQEVRDREEQLVVSAWYELGLRMPRKGMTTRQPSFLGAARELAR* # ORIGINAL: g1220.t1 original gene structure, not modified by PASA NODE_2344_length_6625_cov_37.9885 AUGUSTUS gene 1449 6529 . + . ID=g1220;Name=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS mRNA 1449 6529 . + . ID=g1220.t1;Parent=g1220;Name=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 1449 3194 . + . ID=g1220.t1.exon1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 1449 3194 . + 0 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 3581 3699 . + . ID=g1220.t1.exon2;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 3581 3699 . + 0 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 4179 4446 . + . ID=g1220.t1.exon3;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 4179 4446 . + 1 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 4793 4954 . + . ID=g1220.t1.exon4;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 4793 4954 . + 0 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 5406 5535 . + . ID=g1220.t1.exon5;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 5406 5535 . + 0 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 6047 6136 . + . ID=g1220.t1.exon6;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 6047 6136 . + 2 ID=cds.g1220.t1;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS exon 6387 6529 . + . ID=g1220.t1.exon7;Parent=g1220.t1 NODE_2344_length_6625_cov_37.9885 AUGUSTUS CDS 6387 6529 . + 2 ID=cds.g1220.t1;Parent=g1220.t1 #PROT g1220.t1 g1220 MNPHGNKRRDFFGYTENLLESDSLLDTNEDSAVRADDDDGSDNSLSSGQNQTSATAGSTTGPSGAPGSPRVRSARSRWVAVRDDGTPRTMRAFLQAVFEMLMGVGHVADEMWDRRTDAFLTTVVADVKTKWEVIKIAKIIPALDDDTSVEFARHFHERILAVIRDLFLRFHEQSQRHDGFAIFSEEANESRLRSTLRVQLTRRLNIDNIRSQVLRSIRKGGVGVVYVTQDEQMNVRREIQEMTAHFDSIGATQAHDIQQIFVRDAKIKEQRLQDQKMHNQLHSASPAGEITFDILGSYGLNMNSPSFSKQRRRSSTNPTSAGASRSATRAGSVSARWTPVLERRTSVSSPVGPRRRDSEVDLALTAPRIKSGHSEVVFEVDDGMSSGEDVDAHSSSSGSGSASGEDGDNAQDGVDGDEVEEPLFRRIEDEVTDVPYTIGSYVSVADGVRTGATSAAKTDHDGSSDRASSLRVDSSSRTSRAAGSSAPGSGKTVKSGKSGRTTRTSARDSAHDSSAHDSPRGDSAVSGASGSGRRSKTTQASSSRARSSATPGVPDVVSDNEMEDVEKDALDGMREELKWREEEMDPVKLAESIRVDDIMRLQDEMEAELLSMSKQTNLDASSERQRRSSVVNADDDLANLAYRPVVARDLLDNPENVPAQDADGLNMEGIRGVVTADPLMEATAPGTDALIRRAKETAAAKKRVEEARKQKLRDIIENHVSGQALDESFFNNEKPAEVIKLEFEGGYLLKHPDGVSGRYDFEYEKVVMRAAQSRMSDRVMRNTVTMARRPPMFSLLRGDFDADTAKRLDWKLAMTNETEELFEEIMKTDVRGHLHLDRDECILPSAPRDAVESFMLINRLSAARTRIINDKLYRPSHSRPASSPAS # ORIGINAL: g12734.t1 original gene structure, not modified by PASA NODE_2231_length_7140_cov_39.9673 AUGUSTUS gene 5859 6671 . - . ID=g12734;Name=g12734.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS mRNA 5859 6671 . - . ID=g12734.t1;Parent=g12734;Name=g12734.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 6295 6671 . - . ID=g12734.t1.exon1;Parent=g12734.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 6295 6671 . - 0 ID=cds.g12734.t1;Parent=g12734.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 5859 5964 . - . ID=g12734.t1.exon2;Parent=g12734.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 5859 5964 . - 1 ID=cds.g12734.t1;Parent=g12734.t1 #PROT g12734.t1 g12734 MDAAYMTFVGTVLLDHHLGNPVVLCFVDLLIRSSRTRSRRTSCLHEHPLPSTVCVEAIAVNDDTSSSADLVTRLHPSSGMQQGVASRKEDAVVRMLGDDALNAGGVGHCYEAPLAVGPSARHVRNRWLVAYTLVRNPSLSKLRRRESPSVYGHCSPLNTK* # ORIGINAL: g12733.t1 original gene structure, not modified by PASA NODE_2231_length_7140_cov_39.9673 AUGUSTUS gene 187 4957 . + . ID=g12733;Name=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS mRNA 187 4957 . + . ID=g12733.t1;Parent=g12733;Name=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 187 1239 . + . ID=g12733.t1.exon1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 187 1239 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 1654 1754 . + . ID=g12733.t1.exon2;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 1654 1754 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 1985 2090 . + . ID=g12733.t1.exon3;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 1985 2090 . + 1 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 2428 2556 . + . ID=g12733.t1.exon4;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 2428 2556 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 2784 2906 . + . ID=g12733.t1.exon5;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 2784 2906 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 3236 3394 . + . ID=g12733.t1.exon6;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 3236 3394 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 3602 3666 . + . ID=g12733.t1.exon7;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 3602 3666 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 3854 3932 . + . ID=g12733.t1.exon8;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 3854 3932 . + 1 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 4074 4179 . + . ID=g12733.t1.exon9;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 4074 4179 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 4637 4725 . + . ID=g12733.t1.exon10;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 4637 4725 . + 2 ID=cds.g12733.t1;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS exon 4907 4957 . + . ID=g12733.t1.exon11;Parent=g12733.t1 NODE_2231_length_7140_cov_39.9673 AUGUSTUS CDS 4907 4957 . + 0 ID=cds.g12733.t1;Parent=g12733.t1 #PROT g12733.t1 g12733 MVRPVTRFAAGIFRAAATVTSPGGSAAAFRPAPVAFTQYQGAQHPLGGNGAHPTLTPNGFYVPGHDAYGSANYHTGAYNAYIGAPGDASSALVSSYGHGQYGYQVQPTSMINGGYQHTSYYAHPHAALAREFHSSAVSHDKADAQGAVVSGENGVDARREGLPTPPPSRNGGYQPRRASDFLNQNSQQRDNNQGGYVYQQRTEGSNGSGQARPYEQRSYEQRPQYGERRPYADRPYQRTGGAGVEEVQRPASPTGEQRPWQSQSADQRPFPPAEQQLTSAFVSPAEYTDPADGRKQFIVDTPESLVEMLQMLKEASVVAMDTEFIVYPSYNPALQTVQLATDKFIALFDALRFDSVDIVALFELLSEKELVLHGARMDLRIMRYWLSGKLNVKVFDTQSAGGYLGHGASLGYADLVSKVMGTELPKTHTLSNWNQRPFTAGMVQYAMNDVRYLLAMRDILKAKLEETNRIGWYLDDMVEFLDHPDTKPLDPASAWRIMKRTRNLTPAELAIVRDLAEWREKTCSSINYSTSFVLRDDTLVAFAQLKPTSLADFENIQGVKAPLVRKYGEKIVEVIRNASGKEAPEYLPEDARTDDLITGFMCMAEALTRTRALQAGLAYNVVCVDILDIKRLAVLNENELVTANLKILKGWRREFIGNDLLKLKQGNLQIRWANGKGLVVDDTKTE* # PASA_UPDATE: g12551.t1, single gene model update, valid-1, status:[pasa:asmbl_3606,status:12], valid-1 NODE_213_length_31277_cov_43.5942 . gene 24155 26078 . + . ID=g12551;Name=g12551.t1 NODE_213_length_31277_cov_43.5942 . mRNA 24155 26078 . + . ID=g12551.t1;Parent=g12551;Name=g12551.t1 NODE_213_length_31277_cov_43.5942 . five_prime_UTR 24155 24271 . + . ID=g12551.t1.utr5p1;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . exon 24155 24679 . + . ID=g12551.t1.exon1;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . CDS 24272 24679 . + 0 ID=cds.g12551.t1;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . exon 24853 24987 . + . ID=g12551.t1.exon2;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . CDS 24853 24987 . + 0 ID=cds.g12551.t1;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . exon 25127 26078 . + . ID=g12551.t1.exon3;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . CDS 25127 25726 . + 0 ID=cds.g12551.t1;Parent=g12551.t1 NODE_213_length_31277_cov_43.5942 . three_prime_UTR 25727 26078 . + . ID=g12551.t1.utr3p1;Parent=g12551.t1 #PROT g12551.t1 g12551 MPAYAMDTVGGTTAVFPASHAHATDVVMNIPSDESYEKPSVKYQQMDTPMSVTVGATLESVRCEGDQTASEPVLSNDDAAAGQVDAEKATESSSSMISEEQLPPTVTVLRKASGEGEVYLVGTAHFSPKSCEDVIKTIRMVKPDIIVLELCNSRVNILTVQENNVPDVEFSLREVQRVLREGRGAMGVMQLLLSALSAKLSKDLQIVPGGEFRVAVAEARRLKGCRVILGDRPIQVTLQRTLACLSGWQKLKLAYQIVRTPSGCTPEDVERFKEKDILSEALADLTREYPAVSRTLIAERDLFMAHTMRSVGRRVVAVVGMGHVEGIVRNWDAEIDIAELLRPAAVVATPKPSFVYRAMRAGVVGLGAWLAYSRLRRFGA* # ORIGINAL: g12552.t1 original gene structure, not modified by PASA NODE_213_length_31277_cov_43.5942 AUGUSTUS gene 26159 29177 . - . ID=g12552;Name=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS mRNA 26159 29177 . - . ID=g12552.t1;Parent=g12552;Name=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 29054 29177 . - . ID=g12552.t1.exon1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 29054 29177 . - 0 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 28492 28788 . - . ID=g12552.t1.exon2;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 28492 28788 . - 2 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 28100 28242 . - . ID=g12552.t1.exon3;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 28100 28242 . - 2 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 27916 28017 . - . ID=g12552.t1.exon4;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 27916 28017 . - 0 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 27567 27724 . - . ID=g12552.t1.exon5;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 27567 27724 . - 0 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 27326 27457 . - . ID=g12552.t1.exon6;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 27326 27457 . - 1 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 26844 27159 . - . ID=g12552.t1.exon7;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 26844 27159 . - 1 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 26579 26719 . - . ID=g12552.t1.exon8;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 26579 26719 . - 0 ID=cds.g12552.t1;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 26159 26437 . - . ID=g12552.t1.exon9;Parent=g12552.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 26159 26437 . - 0 ID=cds.g12552.t1;Parent=g12552.t1 #PROT g12552.t1 g12552 MHPGFKRTFSAATAEVAAPATDVSKAARTTFGSASVTATVKDVTHIIVPSEAAEAQQLRLLRTHLDSLKQRPPKLSTSAKVVNDAWITSSLRYGHVLPIKNYTADALMRALLATLSPRIHAPLDVPVISVVTPAKQTISTEQQTGTLQSLPSFNNGSQSMGFSKLDLSSQSQSQPLFSRGVPGNDAEEGYGTGSSDEDAPRTSKSYVCQGVHLLDHPNKIFTDALEAVEKMRLLINDEKGALAFRRAFCSVASLPRRIVRMTDVEGLPHVGEKARHIIRDIVVNGRSTEADRLVNTERFKVLSAFRDVFGCGAVSANRWYDLGIRSVGAVLTCPAADVDERQRKGIQYYHDTIQKMNRNEMERVADVVRNILREIVSEGWSLMMCGGYPRGKCESKDVDLLVSHTDAAVTDGLLKRIVDEMTLRGLIAYVEVVTGHNTKESVKKIHDRPFRPRRRSEGMPAPVGSFDRLDKAFIFMRCPWDSPIRRVDLVVSPPDQLPFAILGWTGSKMFVRSTRQYARDVLGLSLSSHGLFNSDGVATPATSEEDVFRLLKLEYRLPEERNC* # PASA_UPDATE: g12549.t1, single gene model update, valid-1, status:[pasa:asmbl_3605,status:3], valid-1 NODE_213_length_31277_cov_43.5942 . gene 14046 15890 . + . ID=g12549;Name=g12549.t1 NODE_213_length_31277_cov_43.5942 . mRNA 14046 15890 . + . ID=g12549.t1;Parent=g12549;Name=g12549.t1 NODE_213_length_31277_cov_43.5942 . five_prime_UTR 14046 14149 . + . ID=g12549.t1.utr5p1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 14046 14231 . + . ID=g12549.t1.exon1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 14150 14231 . + 0 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 14396 14436 . + . ID=g12549.t1.exon2;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 14396 14436 . + 2 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 14594 14700 . + . ID=g12549.t1.exon3;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 14594 14700 . + 0 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 14836 15064 . + . ID=g12549.t1.exon4;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 14836 15064 . + 1 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 15200 15355 . + . ID=g12549.t1.exon5;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 15200 15355 . + 0 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . exon 15463 15890 . + . ID=g12549.t1.exon6;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . CDS 15463 15621 . + 0 ID=cds.g12549.t1;Parent=g12549.t1 NODE_213_length_31277_cov_43.5942 . three_prime_UTR 15622 15890 . + . ID=g12549.t1.utr3p1;Parent=g12549.t1 #PROT g12549.t1 g12549 MVRLTADLVVESPQYLNPIKDRELDLRSNKIAVIENLGATLDQFDAIDLTDNHIRKLEGFPMLLRLKTLFLSNNRIGKIDRDVATSIPNLEELILANNQLLELGDLLPLAKFSKLRSLCIMKNPVASQTYYRQYIVHNIPSLRLLDFKRIKQKDRAEAAKLFGGKKGQKLHEELGQKVSTFTPGEGLPTEAIKPVPTAAEVQKIKDAIAKATTLDEMRRLEQQLQTGQVPDASANGEGVGSDGVIVGRNGEEMEVDA* # ORIGINAL: g12547.t1 original gene structure, not modified by PASA NODE_213_length_31277_cov_43.5942 AUGUSTUS gene 294 6367 . + . ID=g12547;Name=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS mRNA 294 6367 . + . ID=g12547.t1;Parent=g12547;Name=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 294 609 . + . ID=g12547.t1.exon1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 294 609 . + 2 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 705 2298 . + . ID=g12547.t1.exon2;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 705 2298 . + 1 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 2520 2679 . + . ID=g12547.t1.exon3;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 2520 2679 . + 0 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 2860 2955 . + . ID=g12547.t1.exon4;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 2860 2955 . + 2 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 3166 3295 . + . ID=g12547.t1.exon5;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 3166 3295 . + 2 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 3514 3611 . + . ID=g12547.t1.exon6;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 3514 3611 . + 1 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 3770 5549 . + . ID=g12547.t1.exon7;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 3770 5549 . + 2 ID=cds.g12547.t1;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 5698 6367 . + . ID=g12547.t1.exon8;Parent=g12547.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 5698 6367 . + 1 ID=cds.g12547.t1;Parent=g12547.t1 #PROT g12547.t1 g12547 ILFASVAIASIIRWRRQRGYNIISNETEMIGSDDIIVRDSTLVQVKCVLVTCIIASLTTAFALAFKRTAGSVPVYLPLSFGVSVATGLAVAAITVVEHGYIKAPRSTWANAVYHFVAAATMLPLAFIGSSPETVVVGNGVGISLLVAFCLHIVSVPVCVWSSTKDVHLNRYGVHDPPEDHASFWSRMTMSWLNPLLTKGNRQPLELDDVWDIRQSDKTGEVVPKFDQVKMLRRAHGKTSLLGDLFSLTKHGLFVQALFAFVGSALEVSQPLLLNMVLIYISRRDDNDGGEAGSLDSIVYLYVTGLLVAPVVQSIADGQNYFNGRRIGINVRSALISAIYEKALRVSAAGAAQAAATTAGDDSDKSEGDNQKKKERTDDSGDEDDEEKRPLLGGTKSEQEASTTTGTKKSDSEDALGTVGQIANLMSVDTSRIIESLAYIHFVWTAPLAVLFCCGMLYRYLGWASLAGLVCMIGAMPVNALCAARIARCQKHLMDMKDNRISAMSELLSGIRVIKMHVWEADFEKKVTAARARELVALRTFNYSFAVINTTWYATPAMVSMITFVARYFISSEPLTATDAFTALALFNALQFPLNVIPMTVNDILMSLVSINRIESFLACDEVEPLPEPDRNVALGEIIAANATCAYTRSVAPGDEILKDVTLRCAPGSLTTVVGATGAGKSSLLSAFIGEMKILRGSITKRGRVAYVSQQAWIQNATVRTNILFGSAYNEDRYARVVFACALTTDIEALEAGDLTEIGEKGINLSGGQKQRISLARAVYADSDIYILDDCLSAVDAHVGRHIFQHCIEGILRGKTRVLVTHQVALCLPSSDSVAFMHDGRIEFFGSFEQLNNTPEVLSRVFSESQSVSELPTRDGRDEMEATAHRVEHGIVSGMKHVPALPTAAVPAGKLLDVELSATPDGNGGLSEAAVAAEIERARRCIRKEHVTHTLIDKEDRAKGSIRLGTYLAYVRSSGGWIPFSIFLIAYAAGHVAGVLQSNWLRMWIDAQQPPSSAVGDVLSTAGAVAACNVSALYVGVGAMLPQLAYGYSPRVCDSMWGSLVANNGSDASSSHGHSAAATRDLYVYIAISVGTILLVLGRSLLQAWISMKGAAAYHIRLLRAVLAAPVGWFDKTPLGRIINRFSSDVSEIDQNVAEAVGTCLNYALMAVSVVVVVATVTPVFLAGIVPVLLLNVLVARHYLRTSRELKRLDSITKSPVYALFSETLVGLSTIRAYGAQQRFVTEIGERVDTNHRVYFYLWVANRWLNMRIASLGALVSFGAGISSVLASSVDAGLAGLSLSYALGFSEAILWFIRYHAQMELEMNAVERAEEYIAIEKEPPAVVEGNRPPAQWPSQGTVVVDNLVVKYPGSDVQVLRGVSLNIAAREKIGIVGRTGAGKSTLAVCFFRFMEAASGRIVIDGMDISQMGLHDLRSRLCIIPQEPVLFKGTIRSNLNPFNKHTDAEISAVLARVGLEDKFGGDGGGATDPSSTSKGLDHVVTENGNNLSVGQRQLLCLARALLRRSSVLIMDEATANVDNTTDAFIQETIRSEFADCTVLCIAHRLKTVLDCDRIVVMDQGSVAECGTPDELMARQNGHFWRLCKDSDDDAILARLA* # ORIGINAL: g12553.t1 original gene structure, not modified by PASA NODE_213_length_31277_cov_43.5942 AUGUSTUS gene 29549 30668 . + . ID=g12553;Name=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS mRNA 29549 30668 . + . ID=g12553.t1;Parent=g12553;Name=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 29549 29778 . + . ID=g12553.t1.exon1;Parent=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 29549 29778 . + 0 ID=cds.g12553.t1;Parent=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 30175 30240 . + . ID=g12553.t1.exon2;Parent=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 30175 30240 . + 1 ID=cds.g12553.t1;Parent=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 30398 30668 . + . ID=g12553.t1.exon3;Parent=g12553.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 30398 30668 . + 1 ID=cds.g12553.t1;Parent=g12553.t1 #PROT g12553.t1 g12553 MALGSARIVSLLIVAVTLGEVLLRGNVASSKRGEANHDADDFSIEEAQPTLVGVPFKESHMSLNMGEPRPVLQFLMWIVQAVQFGLIILLLVGDFLFPRLGMAPPAFYVYLAERKMIAIALTFMIGNQIAGGLLSTGAFEISLDGETLFSKLESNRVPSIEEVGQELVRRHISLSPQMQIHTPPHTSM* # PASA_UPDATE: g12548.t1, single gene model update, valid-1, status:[pasa:asmbl_3610,status:12], valid-1 NODE_213_length_31277_cov_43.5942 . gene 6631 13459 . - . ID=g12548;Name=g12548.t1 NODE_213_length_31277_cov_43.5942 . mRNA 6631 13459 . - . ID=g12548.t1;Parent=g12548;Name=g12548.t1 NODE_213_length_31277_cov_43.5942 . five_prime_UTR 13366 13459 . - . ID=g12548.t1.utr5p1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 13297 13459 . - . ID=g12548.t1.exon1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 13297 13365 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 12910 13006 . - . ID=g12548.t1.exon2;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 12910 13006 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 12144 12389 . - . ID=g12548.t1.exon3;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 12144 12389 . - 2 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 11060 11397 . - . ID=g12548.t1.exon4;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 11060 11397 . - 2 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 10716 10814 . - . ID=g12548.t1.exon5;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 10716 10814 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 10425 10502 . - . ID=g12548.t1.exon6;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 10425 10502 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 9990 10068 . - . ID=g12548.t1.exon7;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 9990 10068 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 9404 9600 . - . ID=g12548.t1.exon8;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 9404 9600 . - 2 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 9001 9186 . - . ID=g12548.t1.exon9;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 9001 9186 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 8703 8847 . - . ID=g12548.t1.exon10;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 8703 8847 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 8154 8363 . - . ID=g12548.t1.exon11;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 8154 8363 . - 2 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 7638 7810 . - . ID=g12548.t1.exon12;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 7638 7810 . - 2 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 7120 7253 . - . ID=g12548.t1.exon13;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 7120 7253 . - 0 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . exon 6631 6874 . - . ID=g12548.t1.exon14;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . CDS 6751 6874 . - 1 ID=cds.g12548.t1;Parent=g12548.t1 NODE_213_length_31277_cov_43.5942 . three_prime_UTR 6631 6750 . - . ID=g12548.t1.utr3p1;Parent=g12548.t1 #PROT g12548.t1 g12548 MKFAKLLETQAVAECGDKYISYKRLKKQIKRIVRENAAQAEEAEKSGSRGGTPVVAFERGTKNDDVIVEEITVEGPLSPNNISLESLDPAVLGSSDSGGEGGVRVVRVRSVNDGPKAEGIFIELLYKEMEKYDEFFMEKLNGARRRFQELQQQLRAMRLGRPANSKLFQPKSLAMLSQRFRSSLVLTRFGSNAVGVESELRDGVLERNAKEAEQMLLSAFSEHYRYLHILRDFQILNMTAFRKIVKKHDKYAGVRVEQDVLHDAANHSLASTASIDEMVVDAERVVTDSFFDGNRRQAMHHLRYPFKPRSYSWPTFRLGVFIGIFLPCLLLLILAGFLPDVKKNYPDVRSGVVLFRGLGLPIIAMWLFGVNVYIWHTKKINYVFIFNMNPRNALSYHQVMEIASFLTILWALALVVHLYLPVLSSLTQTSYIAPVLAGAMLTFLLNPINITYKSSRVWLLRKTARILTSPLSKVEFADFWLADQFISLVIMFLDWQFLVCFYASDGANEASIASGKCLGTGNYARPVISMLPSFWRLMQCIRRYVDAKEAGTPTRPHLLNSIKYLASMAVAGFSYGYLYSRDHYGTAAMSTEVLKYTWVCMAVVSTSYAWAWDLIMDWSFVYFDGLRPHLQMNLGFHPYVYYSAVVVNLLFRALWTLTVSPQVIGIYVDNNVLVCALAVAELSRRCVWNIFRLENEHRNNIGKFRVVKEVPLPYEVDGATNFSA* # ORIGINAL: g12550.t1 original gene structure, not modified by PASA NODE_213_length_31277_cov_43.5942 AUGUSTUS gene 16206 21881 . - . ID=g12550;Name=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS mRNA 16206 21881 . - . ID=g12550.t1;Parent=g12550;Name=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 21058 21881 . - . ID=g12550.t1.exon1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 21058 21881 . - 0 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 20862 20929 . - . ID=g12550.t1.exon2;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 20862 20929 . - 1 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 20566 20703 . - . ID=g12550.t1.exon3;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 20566 20703 . - 2 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 20412 20457 . - . ID=g12550.t1.exon4;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 20412 20457 . - 2 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 20217 20302 . - . ID=g12550.t1.exon5;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 20217 20302 . - 1 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 19993 20099 . - . ID=g12550.t1.exon6;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 19993 20099 . - 2 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 19710 19891 . - . ID=g12550.t1.exon7;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 19710 19891 . - 0 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 19447 19504 . - . ID=g12550.t1.exon8;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 19447 19504 . - 1 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 19207 19321 . - . ID=g12550.t1.exon9;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 19207 19321 . - 0 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 18735 19014 . - . ID=g12550.t1.exon10;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 18735 19014 . - 2 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 17697 18533 . - . ID=g12550.t1.exon11;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 17697 18533 . - 1 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 17297 17531 . - . ID=g12550.t1.exon12;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 17297 17531 . - 1 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 17087 17192 . - . ID=g12550.t1.exon13;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 17087 17192 . - 0 ID=cds.g12550.t1;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS exon 16206 16774 . - . ID=g12550.t1.exon14;Parent=g12550.t1 NODE_213_length_31277_cov_43.5942 AUGUSTUS CDS 16206 16774 . - 2 ID=cds.g12550.t1;Parent=g12550.t1 #PROT g12550.t1 g12550 MGNESLDDDLLGAVDMDSIWNNHIAIDNAAAPLSDIARPTASNPATTAATTAATTAATTKVAVSAGKRRTMSIDIDNMDNCLALLNETATLHKNARAHTPEIADDNDCVDLSALRSDSMDYAVLPPTRHASNDVPSANVVSHLHRAVVNVTAPPRTLSSGWLTCRPPSPSRNLSRPVSRTLSMPPVPAIKTVADLVSGRRISRSSSDAEAHVVPPSSCPSADAGAPSSAPVVMMQRGVVYSYATTAITPPEAPTAPTLEHYAVLKKEFGHSQFRGLQWTVIDAVVNQRRDVCCVSATGSGKSLCYQFPAVFQKGTALVVSPLISLMEDQTRALLARGIPATFLGSANKDMGETIGRLSRGEYRVVYATPEFLTAGAHDLMASWEREKVFSLVAIDEAHCVSQWGHDFRSSYRQLGCIKQAMPTTPVIALTATATEGVQHDICKSLSLKTPLVLCSSFDRPNLMLEARPKTGDVRADLAPYFAGRPKGGWSAIVYCPTKKETERVAAELSSLGIKCCHYHAGMGLKDRKEAHDQFSLDRVECCVATIAFGMGIDKPDVRLVIHYGSPRDVESYYQEIGRCGRDGQKGRCVAFHSPSDSLVNARAIAEIENETHRNHRLKMMRRMEEYLTAPQCRRRFIISHFDPTATAPAPANALCGSCDNCCAAIDRLTKAGRPPANFGDEDADANACEGDTAHPSQLFGDNKVDLSAEARLLLHSIVVAGGRFGLGFSLEVLNGKDPKKAWPSKLPMIRANPAFGAGKAHSDAWWRGLFKQLEALQLVAEAAVKNGFGFTAVVTPDGEAWLAKSDDGEGGPLMLRQTDAMVSADRKGNRGKSWAPAVARGSSFGSAGRAGGGGGSGLNSDVGGGYVSAAPVDPHFNGMVEDLFELRKVIAEETHESLANVLDTTTLWAIASARPGSIDSLRAVEGVREAFVALHGLRFLSAVYAYCARAGATPDPKQAPRAAPEIDFGLPPTQTATLAMFMRGMEMASFVEADIARERTLAVGTIESHLCAALAAGADIDVRKCKRIPTLSTLKAHLPDLSWTHLKAVSIMLSLGLNMPQDSAEDNAQCDDNPNAGANGEHSNATESDSVVVDTVVTPTNQEMQATEADLLPKRPHMMVASSASLHRPSAVPVTPSTPSAQTTVSAAMDEATDILCWIRDRAPVSMPITPSTPSSIPTPPDASARKRQLPASFLSTRSTPKYARTGDGLPHRKPL* # PASA_UPDATE: g4221.t1, single gene model update, valid-1, status:[pasa:asmbl_4713,status:12], valid-1 NODE_2647_length_5554_cov_42.87 . gene 203 2288 . + . ID=g4221;Name=g4221.t1 NODE_2647_length_5554_cov_42.87 . mRNA 203 2288 . + . ID=g4221.t1;Parent=g4221;Name=g4221.t1 NODE_2647_length_5554_cov_42.87 . five_prime_UTR 203 204 . + . ID=g4221.t1.utr5p1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . exon 203 403 . + . ID=g4221.t1.exon1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 205 403 . + 0 ID=cds.g4221.t1;Parent=g4221.t1;5_prime_partial=true NODE_2647_length_5554_cov_42.87 . exon 533 612 . + . ID=g4221.t1.exon2;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 533 612 . + 2 ID=cds.g4221.t1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . exon 816 920 . + . ID=g4221.t1.exon3;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 816 920 . + 0 ID=cds.g4221.t1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . exon 1225 1385 . + . ID=g4221.t1.exon4;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 1225 1385 . + 0 ID=cds.g4221.t1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . exon 1638 1686 . + . ID=g4221.t1.exon5;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 1638 1686 . + 1 ID=cds.g4221.t1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . exon 1851 2288 . + . ID=g4221.t1.exon6;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . CDS 1851 2030 . + 0 ID=cds.g4221.t1;Parent=g4221.t1 NODE_2647_length_5554_cov_42.87 . three_prime_UTR 2031 2288 . + . ID=g4221.t1.utr3p1;Parent=g4221.t1 #PROT g4221.t1 g4221 IKDDPSRPMVPRTIFVGGKAAPGYYMAKWIIHLINAIGQIVNNDPIVGNKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMCDEMGRENIFIFGMTVEEVEALGHRGYNPLDYYMKDRELHRVIDQLAGGFFAPEDQAQFKSIHDSLMVHGDRFFLLADYRPYIDAQDKVAHSYRDRKQWMRKCILNIASSGKFSSDRTIREYAKDIWDATPCPVQVPEEQQSRQTSA* # ORIGINAL: g4222.t1 original gene structure, not modified by PASA NODE_2647_length_5554_cov_42.87 AUGUSTUS gene 3364 5472 . + . ID=g4222;Name=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS mRNA 3364 5472 . + . ID=g4222.t1;Parent=g4222;Name=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS exon 3364 3420 . + . ID=g4222.t1.exon1;Parent=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS CDS 3364 3420 . + 0 ID=cds.g4222.t1;Parent=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS exon 3637 3929 . + . ID=g4222.t1.exon2;Parent=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS CDS 3637 3929 . + 0 ID=cds.g4222.t1;Parent=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS exon 4128 5472 . + . ID=g4222.t1.exon3;Parent=g4222.t1 NODE_2647_length_5554_cov_42.87 AUGUSTUS CDS 4128 5472 . + 1 ID=cds.g4222.t1;Parent=g4222.t1 #PROT g4222.t1 g4222 MTYAKNKPASSSKMQNKKKDKKKAHAAPGETTTTTTTPHVHDVGDACNVGDEQQHSRPAVDAPRLLKLPDSFYVAKRGLESGAPDCSQRFLGLLKRVLDEGNKIRRECAETEDRAFNQTGSTPPGVALALNDMKEQLMEGLHFTCVTAHIDATPTPIANTLSALHAELVTMSQHRSLHQWRGEIRRLVGQMEDLAVLSATAHPEAAEKAHSMLRDYAWAPTAHFVSTDAYQEVLESEEERNAAFGSINASMDRLTRDTDEESSSAEEEAIEGHVDQQLAVLEQNICRLDAIVDSADRVRRAAAASSQATVAAASEICAGLSRHYEQMAADAKQDSEQIDSHIDGIRTDIESDDAENHAHWVSIDERRKRLATDDGMRVAFAATIDAMATPGSPAATPAVTVPVTMAVIEAVNAHYGERASIAAETKSAAAARASASSRMDAFPAAVEEARVWQNRLARKVAMCQSAAALFEGIEEFVASVHVVVLGAFDERTTQLRASRAGIRREYCELVETVAKHAARMGQSIGALRDDCRRRILTNTRMAEYYRQIKGHEMRRKAQAEADALQ # PASA_UPDATE: g3431.t1, single gene model update, valid-1, status:[pasa:asmbl_270,status:12], valid-1 NODE_1072_length_14217_cov_48.1187 . gene 10191 11430 . + . ID=g3431;Name=g3431.t1 NODE_1072_length_14217_cov_48.1187 . mRNA 10191 11430 . + . ID=g3431.t1;Parent=g3431;Name=g3431.t1 NODE_1072_length_14217_cov_48.1187 . five_prime_UTR 10191 10278 . + . ID=g3431.t1.utr5p1;Parent=g3431.t1 NODE_1072_length_14217_cov_48.1187 . exon 10191 10576 . + . ID=g3431.t1.exon1;Parent=g3431.t1 NODE_1072_length_14217_cov_48.1187 . CDS 10279 10576 . + 0 ID=cds.g3431.t1;Parent=g3431.t1 NODE_1072_length_14217_cov_48.1187 . exon 10771 11430 . + . ID=g3431.t1.exon2;Parent=g3431.t1 NODE_1072_length_14217_cov_48.1187 . CDS 10771 11282 . + 2 ID=cds.g3431.t1;Parent=g3431.t1 NODE_1072_length_14217_cov_48.1187 . three_prime_UTR 11283 11430 . + . ID=g3431.t1.utr3p1;Parent=g3431.t1 #PROT g3431.t1 g3431 MDLVPPEIVMKITDYLDYIDVAHLGMTCAYLSKVCNDDFVWRHQTLRYIRNEIGALANVLVDGGANASWKDAMIKSIDFCVDTCTSTLPCEQRPRYRQFDMSWGPTHGGYWHEITDPTAIGGRAMELRRMLWFFSARADRFVRRAGTYTLIWRMRFNNSAALSDLRFSVKCRDASDVLAVGPLPIEAQVAASDRHRLRWAHFFMSDITVPTDNVFVEIALTETQSIKSGHVIDKVLFLPSEIMRDFTELVVPLSTTTPTPNGSVPFFLA* # ORIGINAL: g3427.t1 original gene structure, not modified by PASA NODE_1072_length_14217_cov_48.1187 AUGUSTUS gene 2122 4122 . - . ID=g3427;Name=g3427.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS mRNA 2122 4122 . - . ID=g3427.t1;Parent=g3427;Name=g3427.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS exon 2122 4122 . - . ID=g3427.t1.exon1;Parent=g3427.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS CDS 2122 4122 . - 0 ID=cds.g3427.t1;Parent=g3427.t1 #PROT g3427.t1 g3427 MSTPVLRSPQRHASAGAGAQASQHDVDTRDLAPQQSDMAPPNWHDNVLQSRMTEPTIAGAVHTGDLGSPFEQHDLQANAYFFHPSHSTLSPYNPADIPTTEPPGRISTGGRHVHRHAGGVTTGIHPPGGIAVAVNDHDGYRALLKTLTAIVERNAAEALVRASSANQSTALTPGATTTPAGAVAGSVSSVPPPRRKAKVNPLGRKDGVAAPMNSFMLFAQRYRPVLRSYVPSVHNGILSEMLSKLWGVMPLDTKEEYRRLSREMREAVRLAAQSGGADGGGSSSSLLSREGSGDSSGSGATITATSPTTPTTLPLGFSGSVGSFSSPVPSPTGMTRLQGLSMSDSQEPLVDWSGRQMGPPLATNPPRREFSDSGTGVRYMPASGENNSPLTGIRRRADDSDGTEVEEGGADAPPPYAYGGAATGTQFTQAGAAAAVPHSRRRVRPYETNVDASTRPPEGGQTHGPSTISSGQLANQSIMSSGVVGVGQNDRPTSAALSGAAGGRRGSLTRSDALTNDNSLILLPIDFRRNLPSVQRASSDVAAVCESTERLSQWWGGGASDGANFGGQSHRTLRKAESDPTHPSPLGGDTSDGDTAFSLATTALVDSTGARVHWRFVGRDANGREWYSHYWTLPVTLVPRQEDGLDNERDANESGDPRNSGDQWMQ* # PASA_UPDATE: g3428.t1, single gene model update, valid-1, status:[pasa:asmbl_273,status:12],[pasa:asmbl_274,status:12], valid-1 NODE_1072_length_14217_cov_48.1187 . gene 5537 7493 . - . ID=g3428;Name=g3428.t1 NODE_1072_length_14217_cov_48.1187 . mRNA 5537 7493 . - . ID=g3428.t1;Parent=g3428;Name=g3428.t1 NODE_1072_length_14217_cov_48.1187 . exon 7461 7493 . - . ID=g3428.t1.exon1;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . CDS 7461 7493 . - 0 ID=cds.g3428.t1;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . exon 6988 7154 . - . ID=g3428.t1.exon2;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . CDS 6988 7154 . - 0 ID=cds.g3428.t1;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . exon 6002 6794 . - . ID=g3428.t1.exon3;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . CDS 6002 6794 . - 1 ID=cds.g3428.t1;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . exon 5537 5734 . - . ID=g3428.t1.exon4;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . CDS 5564 5734 . - 0 ID=cds.g3428.t1;Parent=g3428.t1 NODE_1072_length_14217_cov_48.1187 . three_prime_UTR 5537 5563 . - . ID=g3428.t1.utr3p1;Parent=g3428.t1 #PROT g3428.t1 g3428 MVMDCALEALQAFPLPIAPPVYGTDGQITDCNNVTNGPFGWASVYATFAVSNAAQRMYDNQDGVLDRFGDFWNVIARQFSTRSSVLGYEIINEPWLGDVPLSLSELEPWSNPNWDLWLPGKSDARNIVRLNAALHSAIRKADNETIIFFEPATGGNILDTFPVGFTEGPGGPAYNDRQALSYHMYCPPLQSDLPYRPSGQGIWGKLKELLDLGACDLLNGYQFEVRQKDAERLGVAGFMTEYGSVPYDDAGLAVIRFAQAKADAALHSWTFWYLTPGDQSTPESVLRAMSRPYARAVAGTIVSHVFDDAMTTLEVVFTAAEDPSVRALPTEIYCSVKHVFKSGVKWAIQPAQGTHATYNKGGQLLLVTLDASSISAGARITVTVVAQ* # ORIGINAL: g3430.t1 original gene structure, not modified by PASA NODE_1072_length_14217_cov_48.1187 AUGUSTUS gene 8641 9792 . - . ID=g3430;Name=g3430.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS mRNA 8641 9792 . - . ID=g3430.t1;Parent=g3430;Name=g3430.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS exon 8641 9792 . - . ID=g3430.t1.exon1;Parent=g3430.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS CDS 8641 9792 . - 0 ID=cds.g3430.t1;Parent=g3430.t1 #PROT g3430.t1 g3430 MEPVRAQFLGPYEAAPAMSTSFCAQTSPETYGSIVRKHTRDMLAELIHSIDADPFPLLRCVKKREIEDNGYLYTLYAEIMSVLHLGPDVDSDRRAKLLKIKADLVRAYNYSNSNNEDDDVLLEPVPNSPGLVRLQEHRVQNITPAPLALPASNNGRPISFSQSPAKVSREHTNLVGLDAVSSSRRILATPRRTASNAPPLTRSAVRQRAETRAASKHDAQRVPTVRCMRTSASAGIVLKRSHHTFNSEPLSGGAPHGSPLHDAVASAIASVRGSVNDSIGRVRGPLSSFGITSLAPTTVAASIFAADGRTVESKRTTRARHVPVIRVVPPTPPGIATAERESHFSGPGLMPRPPIRTRSGASPPVRGLVSPHKSSFSDRTYFV* # ORIGINAL: g3429.t1 original gene structure, not modified by PASA NODE_1072_length_14217_cov_48.1187 AUGUSTUS gene 7596 8051 . - . ID=g3429;Name=g3429.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS mRNA 7596 8051 . - . ID=g3429.t1;Parent=g3429;Name=g3429.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS exon 7596 8051 . - . ID=g3429.t1.exon1;Parent=g3429.t1 NODE_1072_length_14217_cov_48.1187 AUGUSTUS CDS 7596 8051 . - 0 ID=cds.g3429.t1;Parent=g3429.t1 #PROT g3429.t1 g3429 MPHRCSHIARCFGPHNMLHASAIVLAVCALVLQSLVVFADPIPKNERIQVHPTSRQFVGMDGRTRLFHGLALQTTTSDISTMTDAQMDAMIDMGHNVVRIAFHWHLVETAPGVYNQTYVDALATLVDRFAEKGIFAILDMHQDNWSPMYCG* # PASA_UPDATE: g3432.t1, single gene model update, valid-1, status:[pasa:asmbl_271,status:12], valid-1 NODE_1072_length_14217_cov_48.1187 . gene 11473 14127 . + . ID=g3432;Name=g3432.t1 NODE_1072_length_14217_cov_48.1187 . mRNA 11473 14127 . + . ID=g3432.t1;Parent=g3432;Name=g3432.t1 NODE_1072_length_14217_cov_48.1187 . five_prime_UTR 11473 11638 . + . ID=g3432.t1.utr5p1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 11473 11890 . + . ID=g3432.t1.exon1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 11639 11890 . + 0 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 12008 12328 . + . ID=g3432.t1.exon2;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 12008 12328 . + 0 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 12518 12637 . + . ID=g3432.t1.exon3;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 12518 12637 . + 0 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 12902 12996 . + . ID=g3432.t1.exon4;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 12902 12996 . + 0 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 13171 13297 . + . ID=g3432.t1.exon5;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 13171 13297 . + 1 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 13811 13939 . + . ID=g3432.t1.exon6;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 13811 13939 . + 0 ID=cds.g3432.t1;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . exon 14055 14127 . + . ID=g3432.t1.exon7;Parent=g3432.t1 NODE_1072_length_14217_cov_48.1187 . CDS 14055 14127 . + 0 ID=cds.g3432.t1;Parent=g3432.t1;3_prime_partial=true #PROT g3432.t1 g3432 MLRQCARSPLPTCARFIAPQLNLLVRTLHYCLATGGNPAARRAHVAKFTSIFDRNKIPSIPPMATKQPCMYGAKCFRKNAQHLQDYSHPTSAAAAFSTASASTPASDGKPLQSKATSVASGASGAACNVVMPSAPPPLAPPPTPAPVPAGSGLTDLADGQSTEMAGSGKSNYVLKNTGGVYSCSCPAWRNQSVSIDKRTCKHLGALRGADKEASRIGAPAPGASTPTKKRKASAAAASTNDDGSTDVAVLLANSWTPDVNPTGWHVSEKLDGVRSYWNGKTMLSRVGNKFYTPPSFTKDFPQFALDGELWMGRKLFQKCVSVVRRQDAPEAMWQVGRGPVLEVVRPNVSIKYLVFDAPSHPGTFEQRMDYLR # PASA_UPDATE: g7837.t1, single gene model update, valid-1, status:[pasa:asmbl_5584,status:12], valid-1 NODE_3112_length_4269_cov_40.2546 . gene 1299 4170 . + . ID=g7837;Name=g7837.t1 NODE_3112_length_4269_cov_40.2546 . mRNA 1299 4170 . + . ID=g7837.t1;Parent=g7837;Name=g7837.t1 NODE_3112_length_4269_cov_40.2546 . five_prime_UTR 1299 1511 . + . ID=g7837.t1.utr5p1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 1299 1830 . + . ID=g7837.t1.exon1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 1512 1830 . + 0 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 1978 2078 . + . ID=g7837.t1.exon2;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 1978 2078 . + 2 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 2323 2400 . + . ID=g7837.t1.exon3;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 2323 2400 . + 0 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 2774 2797 . + . ID=g7837.t1.exon4;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 2774 2797 . + 0 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 3068 3188 . + . ID=g7837.t1.exon5;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 3068 3188 . + 0 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 3515 3739 . + . ID=g7837.t1.exon6;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 3515 3739 . + 2 ID=cds.g7837.t1;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . exon 4019 4170 . + . ID=g7837.t1.exon7;Parent=g7837.t1 NODE_3112_length_4269_cov_40.2546 . CDS 4019 4170 . + 2 ID=cds.g7837.t1;Parent=g7837.t1 #PROT g7837.t1 g7837 MDDEGPRGRAMPDPLGASLGTTGLRRETQAPRRTIPVQNGGGGGGANGRNISFKLPQPAMPDFSTLKRTQYKTMAGSYHRSHSRTSKGKYFKVVVRLRPPVPQELEVHAEECLVVENSRVVRITEVIDPGAKPSSMPTEVAVHGFKFDQVYDKDTTQDELYGTAIKPVVESVLEGYNGSVIAYGQTGTGKTYTMEGRYDDDRGVIPRASEAIFHYIENSNSGSKFLVRISFLEVYNERVYDLLVPTGENLRVREDAKRGVYVEGLSEHIVRNPEDIHDLMRRGSAVRATGCTKANAESSRSHAVFTIVLERSVADAGEVEPGRWTHFCTYSSHQSAPHV* # ORIGINAL: g7836.t1 original gene structure, not modified by PASA NODE_3112_length_4269_cov_40.2546 AUGUSTUS gene 316 702 . - . ID=g7836;Name=g7836.t1 NODE_3112_length_4269_cov_40.2546 AUGUSTUS mRNA 316 702 . - . ID=g7836.t1;Parent=g7836;Name=g7836.t1 NODE_3112_length_4269_cov_40.2546 AUGUSTUS exon 316 702 . - . ID=g7836.t1.exon1;Parent=g7836.t1 NODE_3112_length_4269_cov_40.2546 AUGUSTUS CDS 316 702 . - 0 ID=cds.g7836.t1;Parent=g7836.t1 #PROT g7836.t1 g7836 MRWLQAYALVATLLLLCACVWDCCDARSHQRRQDGQGGAGRNVRDRNANADHAAYAQDARYRQETRKVLENVGRRQRELAEDKHDLLNTRPTGKFSYDGHVQALDNEKRHLENVKAEHSECQRSGRCK* # PASA_UPDATE: g717.t1, single gene model update, valid-1, status:[pasa:asmbl_7973,status:3], valid-1 NODE_527_length_21771_cov_40.5173 . gene 11286 12994 . + . ID=g717;Name=g717.t1 NODE_527_length_21771_cov_40.5173 . mRNA 11286 12994 . + . ID=g717.t1;Parent=g717;Name=g717.t1 NODE_527_length_21771_cov_40.5173 . five_prime_UTR 11286 11600 . + . ID=g717.t1.utr5p1;Parent=g717.t1 NODE_527_length_21771_cov_40.5173 . exon 11286 12994 . + . ID=g717.t1.exon1;Parent=g717.t1 NODE_527_length_21771_cov_40.5173 . CDS 11601 12776 . + 0 ID=cds.g717.t1;Parent=g717.t1 NODE_527_length_21771_cov_40.5173 . three_prime_UTR 12777 12994 . + . ID=g717.t1.utr3p1;Parent=g717.t1 #PROT g717.t1 g717 MYINVLYRSAKLIIHSFVFQVLQVQHCIELKLLALTISGEDCDLSSVGVNHCNLSQQTKMARGEFAALLAVACFAAVLCAVPSDAQTPTPTKPKNQTLGFCIWEDKKAYIYNVVASVGCIQRPDTYETATLVNGDVTLTQVGKMDYVEAYAAVDTQNTFSCSGYIGVIECTQRDGSPVPNVAAPNRTDLPPPVPTTRPINRTLGFCDWGYGVISVRNLKDEIKCVQRVDTFDIGAPINGTLVFQNAPLQVDYVEAYGAINTESVRSCSNYIGVVTCTAVGSPVVPVPSTTITPPRQTSAAAISSSASSSQSAAQPPPSQQASSAPAASRSSSPSNASTGVPRPPVATSDGAAGGDVEPTNTDSVSAQNSATSAGLSLAAVAAGMIVLAAMV* # ORIGINAL: g714.t1 original gene structure, not modified by PASA NODE_527_length_21771_cov_40.5173 AUGUSTUS gene 196 3015 . - . ID=g714;Name=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS mRNA 196 3015 . - . ID=g714.t1;Parent=g714;Name=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 2646 3015 . - . ID=g714.t1.exon1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 2646 3015 . - 0 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 2226 2337 . - . ID=g714.t1.exon2;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 2226 2337 . - 2 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 1906 1978 . - . ID=g714.t1.exon3;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 1906 1978 . - 1 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 1591 1644 . - . ID=g714.t1.exon4;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 1591 1644 . - 0 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 1134 1261 . - . ID=g714.t1.exon5;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 1134 1261 . - 0 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 691 814 . - . ID=g714.t1.exon6;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 691 814 . - 1 ID=cds.g714.t1;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 196 271 . - . ID=g714.t1.exon7;Parent=g714.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 196 271 . - 0 ID=cds.g714.t1;Parent=g714.t1 #PROT g714.t1 g714 MLSSSSSSSSASPPPSSPPSPGAASSARGGKREHKTQRSSSVADEEEDAASEKQQKQQQQPSAVSATAAGARQKARDPASRYWLLHALYVRRDYAACRPLIEELLRDRGEAAGSASNYALYVKALIHRHEGNIEASLQCFREAALGVDGDVACLKQVARSLYMLGRHKAALEVYDEAADMSKTDWEIAHNRGMCCLQMNRIDKAKQHFASALAMEPHHVTHVQFAGACVIEGDLPAALEQLQLALALDPEDARLLTMLGLLHLRMGNGMKAFDCLGNSLAHDGTDLKTVLAAGSILQEGGDVDAALSKYRSA # ORIGINAL: g716.t1 original gene structure, not modified by PASA NODE_527_length_21771_cov_40.5173 AUGUSTUS gene 8567 10495 . + . ID=g716;Name=g716.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS mRNA 8567 10495 . + . ID=g716.t1;Parent=g716;Name=g716.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 8567 10495 . + . ID=g716.t1.exon1;Parent=g716.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 8567 10495 . + 0 ID=cds.g716.t1;Parent=g716.t1 #PROT g716.t1 g716 MDADGNALPGFVMSPRQRQADAVASDETDNRCSTQGGGGTGDTNPRVDIVEVPDDVVEDLTSGGQRPYIPGRSVVIHQSESFGGNAAVQSVVVVEFVDDAPLVDCIDILPGACVGDAVAGSGGAGDRQPPASPSVLRLKPTMDSDLRSSSMLSLKSLSPGAVKRSLDGVGRNIKGLVARDRWVDETLHVDAPASHEDFNVDAERLFNYENDNVCYEWADNVGRWGWRKSLAYSMLTSLWIMFVSVAVAVFFTGYMFLQYYTRLQCFFYPRAHWPLGTQWVDTFFTALETFFLHMGHYALLACMYGRRRVHTIFWMNLLIATAACVYEVSSQPIGTRGTWVTYIPKVIVMLLTFVANGYKMSRALVPPSEPRKERMRCGVVLCAPITLAVVTGIVFGKLAMPFYADPHTTEKEKLAITIVAPAFFAVSQALCRMSAERCRFNHAGTSYVLLLIQQGLSAALLRILQAGLQNMSDVVIIGFYFGGLGIADRSTIMLRDGIAYIVFRCGKRLPGDFFAIPRRRRLIGDILIVDLFLEYAAIMIGNSVVLGVRLAYMSDGVDSVGSFFERTAVQLAIQSVATAISIYLSGARQNLPVMRLWRRFWKAYAAVISLVIIMGAFYFLQPLTQTIRENIAKGNADLPCIY* # PASA_UPDATE: g718.t1, single gene model update, valid-1, status:[pasa:asmbl_7974,status:12],[pasa:asmbl_7975,status:12], valid-1 NODE_527_length_21771_cov_40.5173 . gene 13987 20917 . + . ID=g718;Name=g718.t1 NODE_527_length_21771_cov_40.5173 . mRNA 13987 20917 . + . ID=g718.t1;Parent=g718;Name=g718.t1 NODE_527_length_21771_cov_40.5173 . five_prime_UTR 13987 13995 . + . ID=g718.t1.utr5p1;Parent=g718.t1 NODE_527_length_21771_cov_40.5173 . exon 13987 20917 . + . ID=g718.t1.exon1;Parent=g718.t1 NODE_527_length_21771_cov_40.5173 . CDS 13996 20694 . + 0 ID=cds.g718.t1;Parent=g718.t1 NODE_527_length_21771_cov_40.5173 . three_prime_UTR 20695 20917 . + . ID=g718.t1.utr3p1;Parent=g718.t1 #PROT g718.t1 g718 MNPRHRRRARRQSALKMYCALVTAALFAIARVPGHVEAQSAEWLSSRAISARGDNGVLRFLSMHFADVDGDGDLDIVYHSQLPYPRPFRSIGWLEKKVVVCADGASDAACSGGFAEPRPIATEINYALKETKDSVTAHVEAFPSLFHVGDVDGDGLPDIVFSAQETMSGRLPNDTRSFSVEGMPAVFLMRNLGGGVYSDRLLVDLYPSHTGATCLPRITTHGSAPAIAVACEIGGFGTPAFVALYTPQSPSSPSSSAPYALGTVGGAALLTNAEAVVARQFKRLSNFDRTLIVKARDLIAPADRIDGLSFKMFVAGLSLSSLPQTQFIYLGAEVNLPPFSALSVRAFYETSPNGGAWSNVTLAGTDELSALSQLCGSGTASFLLADVNSDGLPDLVAHGTKDSAILGLYWMENTGSAPFGQPRRLLATPKPVIDALVVDLDGDSIRDLAYVTQDGAYVLYGGARGIAAAEASHSDAVLVAAGLIGTLQLSVEDIDADGKADLFVLSSATGVAVLNKRDSSFGEPLAAFVGASATGTDAGPPGAAPSDADFAGFVAEIDINGDGLTDVVYGAMSSTDVARTLSEPDGVLPRLFARVRSAENGTLGEAFLLTDDNELSAPYSGSARVADRLVGPFMVRDVTGDGNADLVAIGQRTIGAHSSSYAYVVSYNASAPLHDPTRSDVRVSTAQHPVSVEGYASVALGDIDGDGMPDLLSAGSSQQVFLHRNRLALRPSFDYASHWDEAVVAQRRRNESGFEYAGVLLTTAIPIAIASIASGRFNSTANGGTGDDVAVAVQQVGIYVYTNTDGKGSLDAGVLVAPGDFGALRVGRFTPSPTLGLVAFSQLVPGIVLVTRREGASFMTRLSIPSSLTTVDFLSVADLNMDGADDIVAGACDYGTGTLAGLVWLENGGGGTRWTEHAIAFGTSDKCNGFSGIDAYTYATALRIDGDPFPDILYSFGTEAYGVPRFATATWRRNLGKTVDVVAVNSALPSTLISGLACTDSGSGSGSGSGSGAVGWADMVSQAGLPSCFHSLKDAVDSLRVTFAPYILVRVWAGVYTGSLSINTARQVTLIGMDAAAAPFNAAKKSTHILGVDSSAEPLPVHPSVSVVGRLSIKAGSRVRVVGIGFVQGDTAPFAGDGGLLHVDALASVAVERSSFRGGSAVSGGGGCAYAEGAAVSFTDVSFERCAAGASGGALHVLNPLLLVLGRALFVNNTAGVHGGGLFIASTGGDGAAGVASLGITLTGKVAFLSNAAVAGGGGIFHTPLLGNAALFVAARQGNGTLTDEAGLFAHSFTNNTADYSSDVGTPATTLVVTRRPSGLRAGAAPATNDLLTIVCKDSYGSVVRGRATDVMTVAASLATAPDGTAVAVVGSAVATRRPGSSEFQAADLRLRSNVARVNVTLSLSATVADPALAASSSAALLLSKRDATSSSNGGFVSVISSSVVVSLAACGAGNAIIEGMCSPCPEGTSNPLSDGACMQCAPGTQASGLGNQACRPCARGAVQADKGADLCVECPGGTYANDNSTLCLACPEGGVVCQGGELNFLEDFWHSPGPVSPSTHFHRCKTNGICLLRGIDDVDQSVPVGFRGDERATGEVYCTKGHTGPLCAVCEDGYAARQDLCHECWSQRASWVVTVLLGIAAALVCVFFLRQNRTNRSRLSGLARELVNHVQMLAIIKNFQARTFGTFRDVVGWTDSSGVGLFDVQPIQCALGWSYYQRWAFYISCPLIGVAIPALFFLGKRAISRYNIRFPNGGEGIFSRKMAGGRRHSSSRGSTSNGEAYALSASNTGRATTASSALSVSSSLWSGAEKGALSASASAASAAAMLPRGRRDSAAAAGSLTASEARYSAPKPLQFNRFFSAVVLLEFLMYTSIATEVLSVFRCYSPAIDGVSYLWADFSVTCGGGRHTAAVVVGAIAVAIYVIGIPFLGVYTVYRHRKELSNRNALERYGFLYAGYRASNPCPYWEAIVLVRKGALVFLSAFVIDPYVQLYGGIWVITTAIMLQFSFMPYKRTLLNVIEAASLVIVWLTQALLLLPGVEGAEVSGDGVGIFIAVLNMAFVAVVVVFILRFVLRGMRKRYLRRKGKKDRRCAAVARQRSALAGSEKDSAAAASNRADISSEMGDSIATRDVDIDIDDFDDEGNVNESEDSDYFESDGRVFGWRAGSSLNNSSRSRVERATAAAENMDTTGFQSVAVPVGVQSQDVAFVGEGAVFVRVGDRSVVVGPSRETVL* # ORIGINAL: g715.t1 original gene structure, not modified by PASA NODE_527_length_21771_cov_40.5173 AUGUSTUS gene 3922 8134 . + . ID=g715;Name=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS mRNA 3922 8134 . + . ID=g715.t1;Parent=g715;Name=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 3922 4212 . + . ID=g715.t1.exon1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 3922 4212 . + 0 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 4511 4547 . + . ID=g715.t1.exon2;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 4511 4547 . + 0 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 4725 5077 . + . ID=g715.t1.exon3;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 4725 5077 . + 2 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 5424 5822 . + . ID=g715.t1.exon4;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 5424 5822 . + 0 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 6346 6492 . + . ID=g715.t1.exon5;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 6346 6492 . + 0 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 6726 7006 . + . ID=g715.t1.exon6;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 6726 7006 . + 0 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 7215 7793 . + . ID=g715.t1.exon7;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 7215 7793 . + 1 ID=cds.g715.t1;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS exon 7972 8134 . + . ID=g715.t1.exon8;Parent=g715.t1 NODE_527_length_21771_cov_40.5173 AUGUSTUS CDS 7972 8134 . + 1 ID=cds.g715.t1;Parent=g715.t1 #PROT g715.t1 g715 MADAGEFPGDVECGRIRTALDHHSFFLGEKEALGDQHAFGSFVRCFRRARFAAGDVIIRQGDSTRDFYVLEKGRCDILVTKFDKAVKVGEVAPGHPFGELAYVYKRPRAATIVATEACVAWVAEERCLDDFVGASPAIRHRIDAQGWLRHVMSEHVLFSHLDSEAKKETLVRAFVEERLPAGTAVTQQGEGSDGRFFVLAQGDCEVYVHKAGEPETLVGRLHAGDTFGELSLLYDRPRTATVRTSTPAVLMTLDRPTFKALSARGSQCYQDVFQRHATIRRGDEMYMTLDDFLTALRAARAENGGDAPTVTAQRLALMFKVADKTGSNLISFSEFVLLGMLLEKPHPEFEIAFRFFDKDKSGSIDRDEFVTAMKAIMASDGGRHTAALPDEKLLTELFGRDGAGKLTYEEFEQLLKKGRLPELVEFWRSLADNVRIVRENWLKRVSTVTSEDGMVVSSQDGVAGVDSYKYLVAGGIAGAASRSFVAPLVRLKMLLQTQAEPKKYTGIVQGVRLMYREDGIRGFFRGNGSNVMRIIPMTGLQYFFYEHLKVVMRDDDGHLTVLRRLLAGGLAGVTASTATYPLDMIRARLTVQSGNDRQYRGIMHGMRVVVSTEGPVALYKGLWPTMLGVFPFMAIDFAVYEGLKPYAPRKEGTEEATTMGLLLCGACAGLVSQTIAFPLELVRRRLQVQDILGKYRYRGVWDGLRSTFRCEGFVGLYHGLWPNYLKAAPSIAIAFVVYEHAKKALGLPM* # PASA_UPDATE: g10565.t1, single gene model update, valid-1, status:[pasa:asmbl_6219,status:12], valid-1 NODE_3561_length_3204_cov_36.38 . gene 1386 2891 . + . ID=g10565;Name=g10565.t1 NODE_3561_length_3204_cov_36.38 . mRNA 1386 2891 . + . ID=g10565.t1;Parent=g10565;Name=g10565.t1 NODE_3561_length_3204_cov_36.38 . five_prime_UTR 1386 1490 . + . ID=g10565.t1.utr5p1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . exon 1386 1511 . + . ID=g10565.t1.exon1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . CDS 1491 1511 . + 0 ID=cds.g10565.t1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . exon 1713 1830 . + . ID=g10565.t1.exon2;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . CDS 1713 1830 . + 0 ID=cds.g10565.t1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . exon 1923 2017 . + . ID=g10565.t1.exon3;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . CDS 1923 2017 . + 2 ID=cds.g10565.t1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . exon 2123 2203 . + . ID=g10565.t1.exon4;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . CDS 2123 2203 . + 0 ID=cds.g10565.t1;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . exon 2451 2891 . + . ID=g10565.t1.exon5;Parent=g10565.t1 NODE_3561_length_3204_cov_36.38 . CDS 2451 2891 . + 0 ID=cds.g10565.t1;Parent=g10565.t1;3_prime_partial=true #PROT g10565.t1 g10565 MSMAEMEAHDARTHDGALPFDKGVAHRVVFGESFFPSARESYHLLRYDFKPASIDNSKPGSLIIDEKDKVSVDLPAVNGTDGIQFQGPRKLAQKECVLIYDRKDKVFKLERLISTSVLKGVRSKPKATVGRGVVTHPSSQPSSQPSSQPSSQPSSQQNPPMKESMVSPLHANGRNNEGAAGANGSATRDPFGDDEDEEFNKAFLSSSGDSSLDSSSDSSDSDAKPTTKGRNTGKGSKRPLAKSAGPPAKKAA # PASA_UPDATE: g10564.t1, single gene model update, valid-1, status:[pasa:asmbl_6220,status:12], valid-1 NODE_3561_length_3204_cov_36.38 . gene 366 653 . - . ID=g10564;Name=g10564.t1 NODE_3561_length_3204_cov_36.38 . mRNA 366 653 . - . ID=g10564.t1;Parent=g10564;Name=g10564.t1 NODE_3561_length_3204_cov_36.38 . five_prime_UTR 512 653 . - . ID=g10564.t1.utr5p1;Parent=g10564.t1 NODE_3561_length_3204_cov_36.38 . exon 366 653 . - . ID=g10564.t1.exon1;Parent=g10564.t1 NODE_3561_length_3204_cov_36.38 . CDS 366 511 . - 0 ID=cds.g10564.t1;Parent=g10564.t1;3_prime_partial=true #PROT g10564.t1 g10564 MGNFASIFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI # ORIGINAL: g1538.t1 original gene structure, not modified by PASA NODE_2380_length_6486_cov_40.1869 AUGUSTUS gene 50 4779 . - . ID=g1538;Name=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS mRNA 50 4779 . - . ID=g1538.t1;Parent=g1538;Name=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 4229 4779 . - . ID=g1538.t1.exon1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 4229 4779 . - 0 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 3566 3815 . - . ID=g1538.t1.exon2;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 3566 3815 . - 1 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 2936 3201 . - . ID=g1538.t1.exon3;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 2936 3201 . - 0 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 2492 2571 . - . ID=g1538.t1.exon4;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 2492 2571 . - 1 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 1767 1948 . - . ID=g1538.t1.exon5;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 1767 1948 . - 2 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 715 1544 . - . ID=g1538.t1.exon6;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 715 1544 . - 0 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 400 478 . - . ID=g1538.t1.exon7;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 400 478 . - 1 ID=cds.g1538.t1;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS exon 50 129 . - . ID=g1538.t1.exon8;Parent=g1538.t1 NODE_2380_length_6486_cov_40.1869 AUGUSTUS CDS 50 129 . - 0 ID=cds.g1538.t1;Parent=g1538.t1 #PROT g1538.t1 g1538 MMRLAFLVSSHRRGARGGGPSAPPISSVLFLIIIIVTDLCLAQPAGPQTLSIAIVGVGDVGMRTLSAARLAMGHLNNNTDGVYDGSLQTFSATTTVVVSVRNVHVMHCDGAAVLGALESLSLVDPTDNSTLSAVIAPPSCEEGAHASSLFAALRRVPVVIPAPSSMSGGASLVDWRAADAAVFRALNVSIPCVSAVHVDDTDTMIADSLLCFGKAGGQDVRVAVVLNAHEAGPSFLQSLHSAAVAVDLVTAKHQWVYGSCIWNVTRDWAGALTVCDSPPPLDWVPFNSFTNSWYQSDPPAFNASLTDRGGVHADATVYDSVIALALAANASVASGLPVNGSAVASKLVLTSFQGASGPVSFNSRKDRAGLSTTISLIGLSLPAASKGISVSVVGPIVGVLGGVVMVLVLFAAAWYRRREKVMSSLKRRTVKSMEVVLIEMLSEGAFGQVYKGHFRGTIVAVKVLKAVTKIAHREGHAVKNKNEMYPRASTTVEPPADKFTTNNNSNTNANTNIHIHNEGSSNASKEGTTVASASSAGISVFQSTALKDGARRTTMFGFKRSTGSGAPQKHKTSTTDNTMNLFVSRNAREHAAVARIDLVNRASAHHSRSPGSAALSFIKEKLWKKTGHSRKNNHDSFGTMGTNARTGGHSTVTSSYPHPSDNSASVTSGSQSQASRGHLASSLRFSDVSGVSARKSLTLMDARKVTEHLDMFQSEIDLMCTLRHPNIVLYMGCVDEIDLPLMLLQEFLSGGSMFDAIATSPRWSLDLRLHMA # ORIGINAL: g14141.t1 original gene structure, not modified by PASA NODE_3241_length_3931_cov_36.7518 AUGUSTUS gene 464 3341 . - . ID=g14141;Name=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS mRNA 464 3341 . - . ID=g14141.t1;Parent=g14141;Name=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 3239 3341 . - . ID=g14141.t1.exon1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 3239 3341 . - 0 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 2750 2931 . - . ID=g14141.t1.exon2;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 2750 2931 . - 2 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 2449 2545 . - . ID=g14141.t1.exon3;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 2449 2545 . - 0 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 1742 2140 . - . ID=g14141.t1.exon4;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 1742 2140 . - 2 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 1294 1456 . - . ID=g14141.t1.exon5;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 1294 1456 . - 2 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 844 916 . - . ID=g14141.t1.exon6;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 844 916 . - 1 ID=cds.g14141.t1;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS exon 464 652 . - . ID=g14141.t1.exon7;Parent=g14141.t1 NODE_3241_length_3931_cov_36.7518 AUGUSTUS CDS 464 652 . - 0 ID=cds.g14141.t1;Parent=g14141.t1 #PROT g14141.t1 g14141 MGNCRPAAAEGGGGKGIRKVTCPDDFAIMFKQVEGEIPGSPIFLMRLASESRHLEVQLLGDRQNNVISLFGRDCSVQRRHQKIIEEAPASIASPELLRDMERAAVRLAKLVGYVGAGTVEFLYSPADGKYHFLELNPRLQVEHPCTEMITNVNLPAAQLQVAMGIPLHRIRDIRALHGLSPTDDSPIHYESLYGTPPPPLSLSPLPSASSSSSSEVHVASSALPVESSAARDGECELPGLVPRPAGHVVACRITAENPDDGFRPMGGVIHELTFRSSQHVWGYFSVAASGSLHEYADSQFGHIFAWGENRELARRSMVLALKELSIRADMRTTVEYLVMLLEDSKFRTNAIDTTWLDGLIASKVSAERPEPLVAVVCGAIHMALGSIDNALAACKRSLERGQ # ORIGINAL: g346.t1 original gene structure, not modified by PASA NODE_4223_length_1988_cov_38.5018 AUGUSTUS gene 562 1890 . - . ID=g346;Name=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS mRNA 562 1890 . - . ID=g346.t1;Parent=g346;Name=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS exon 1783 1890 . - . ID=g346.t1.exon1;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS CDS 1783 1890 . - 2 ID=cds.g346.t1;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS exon 1345 1499 . - . ID=g346.t1.exon2;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS CDS 1345 1499 . - 2 ID=cds.g346.t1;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS exon 1114 1212 . - . ID=g346.t1.exon3;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS CDS 1114 1212 . - 0 ID=cds.g346.t1;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS exon 562 846 . - . ID=g346.t1.exon4;Parent=g346.t1 NODE_4223_length_1988_cov_38.5018 AUGUSTUS CDS 562 846 . - 0 ID=cds.g346.t1;Parent=g346.t1 #PROT g346.t1 g346 QYEDQFEKVANAKKARIEKNEKQRIKNIAESTGSKGRVTSATISQQELKGQVEQALAVTRKSTASLGKFDQGLKNEPKVKAPGKKRKFEPTTGDFRKEKAKALDVVNKILDKQGVFDTNVATNMHISSEQRARAASNAANGSPAYKAKKQGRKSSGRVTKAKDRTKSAASSSSSPKGGPKGASKGGSKGASPKRSPKAKVPGTRGGRKGGKRMS* # ORIGINAL: g2242.t1 original gene structure, not modified by PASA NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS gene 4046 5194 . + . ID=g2242;Name=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS mRNA 4046 5194 . + . ID=g2242.t1;Parent=g2242;Name=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 4046 4366 . + . ID=g2242.t1.exon1;Parent=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 4046 4366 . + 0 ID=cds.g2242.t1;Parent=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 4547 4719 . + . ID=g2242.t1.exon2;Parent=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 4547 4719 . + 0 ID=cds.g2242.t1;Parent=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 4966 5194 . + . ID=g2242.t1.exon3;Parent=g2242.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 4966 5194 . + 1 ID=cds.g2242.t1;Parent=g2242.t1 #PROT g2242.t1 g2242 MANKRTSARIASKPNPPPNMKDDDESETPADRRNRIPTASKGKGRSTGTRPNGRASTPRSIKNRARTASVTGTPRGRPATDGEVMSKQFRLENIKKLGAIAEHRKETANEVHSHTVWINKGGVGKSTLTFQMACATAIATKDTSNVLVVDVCPQANVSQMLLGGGQGGTEMVEELTGQKTTIAGYMAESVDTNCNVKDFLKYLVHPSGANVNAPQNIYLLCGDPYIDKIAQGLSDFALRQP # ORIGINAL: g2239.t1 original gene structure, not modified by PASA NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS gene 688 1116 . - . ID=g2239;Name=g2239.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS mRNA 688 1116 . - . ID=g2239.t1;Parent=g2239;Name=g2239.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 688 1116 . - . ID=g2239.t1.exon1;Parent=g2239.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 688 1116 . - 0 ID=cds.g2239.t1;Parent=g2239.t1 #PROT g2239.t1 g2239 MDSSMVRRRWSSFFVYAVSSTACRGRYSACIRKARPPWTQCASQNRIVAACTWRQSAISYSLCLTETPYASCVAEIERLKGTDHPYDVVILPASTLVAWFSDYASSIATGVATVAVHGAEYISAETFVHDGGAVEEMSLTIV* # ORIGINAL: g2241.t1 original gene structure, not modified by PASA NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS gene 2903 3211 . - . ID=g2241;Name=g2241.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS mRNA 2903 3211 . - . ID=g2241.t1;Parent=g2241;Name=g2241.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 2903 3211 . - . ID=g2241.t1.exon1;Parent=g2241.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 2903 3211 . - 0 ID=cds.g2241.t1;Parent=g2241.t1 #PROT g2241.t1 g2241 MEDANGALASGEPKPAVPRMRNCLSLWQIVATTFAAFDADVREWMFVFVPNLRNLRSSQCGRHFNHVRPKKHRRNDSSSSSESDGEVNSPRADLAPLEVIRE* # ORIGINAL: g2240.t1 original gene structure, not modified by PASA NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS gene 1211 1907 . - . ID=g2240;Name=g2240.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS mRNA 1211 1907 . - . ID=g2240.t1;Parent=g2240;Name=g2240.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 1759 1907 . - . ID=g2240.t1.exon1;Parent=g2240.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 1759 1907 . - 0 ID=cds.g2240.t1;Parent=g2240.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS exon 1211 1511 . - . ID=g2240.t1.exon2;Parent=g2240.t1 NODE_2735_length_5290_cov_40.8945_potentialcontaminant AUGUSTUS CDS 1211 1511 . - 1 ID=cds.g2240.t1;Parent=g2240.t1 #PROT g2240.t1 g2240 MMGDAFAAACEFDALTSIQSPSLRLRARKVSCHLGTAIIRSSGKMRLILRKRPSAYMRPYTQALTKVVSERDATLRAAGRRVKSVNGKMELLSFTTCDPLIDIAAAAKGRAADNLFIGAEATGTNAALIDMLSDATRALPPAVERKQIV* # PASA_UPDATE: g14239.t1, single gene model update, valid-1, status:[pasa:asmbl_2173,status:3], valid-1 NODE_1620_length_10163_cov_42.5414 . gene 8258 10143 . - . ID=g14239;Name=g14239.t1 NODE_1620_length_10163_cov_42.5414 . mRNA 8258 10143 . - . ID=g14239.t1;Parent=g14239;Name=g14239.t1 NODE_1620_length_10163_cov_42.5414 . five_prime_UTR 9894 10143 . - . ID=g14239.t1.utr5p1;Parent=g14239.t1 NODE_1620_length_10163_cov_42.5414 . exon 9741 10143 . - . ID=g14239.t1.exon1;Parent=g14239.t1 NODE_1620_length_10163_cov_42.5414 . CDS 9741 9893 . - 0 ID=cds.g14239.t1;Parent=g14239.t1 NODE_1620_length_10163_cov_42.5414 . exon 8258 9359 . - . ID=g14239.t1.exon2;Parent=g14239.t1 NODE_1620_length_10163_cov_42.5414 . CDS 8316 9359 . - 0 ID=cds.g14239.t1;Parent=g14239.t1 NODE_1620_length_10163_cov_42.5414 . three_prime_UTR 8258 8315 . - . ID=g14239.t1.utr3p1;Parent=g14239.t1 #PROT g14239.t1 g14239 MSRKATVFAARAAVFAAIVQICLSSHFRPASASIADETRSSVFHAGDGPEAAVRHARGATTSFPQCTRLIEKLHSYTALLDGLEAEMDALVSTATLVIKTEDAATVAVNDVCGLMHALDNVRQLGIVTAVLPVVGGEINTLSAAAAAAHTPANTLCTEVQALMTAVHPPAVSARKIVSSARTLKNKLGVMRSHCESALMTVGRAVTNHTNLCSLPTDRGCENAFNQIAAAGSLLSDATSKIKKVILSKSAANKTYEHIETARIEAEVAIGPVQNAIGTLAGLQHYLKYNPACSVKSTSRCQKVPFPCGVNQQCCGTVKGKCVCKFNESKVCYSHVCTKEVPSSCLPLLAEVITQANVKIPTLPSLDFLSARIPSFPSVTIPDNLVGLSISLPRCIIAS* # ORIGINAL: g14238.t1 original gene structure, not modified by PASA NODE_1620_length_10163_cov_42.5414 AUGUSTUS gene 4418 6712 . - . ID=g14238;Name=g14238.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS mRNA 4418 6712 . - . ID=g14238.t1;Parent=g14238;Name=g14238.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 5760 6712 . - . ID=g14238.t1.exon1;Parent=g14238.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 5760 6712 . - 0 ID=cds.g14238.t1;Parent=g14238.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 4418 5552 . - . ID=g14238.t1.exon2;Parent=g14238.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 4418 5552 . - 1 ID=cds.g14238.t1;Parent=g14238.t1 #PROT g14238.t1 g14238 MKSRSWRAVTLVIMVTVGVVLLAGSASIVSTGSLTFNRHMLTLVARHATAFATGNVNAFSRGGSEDEALIVVKSDDSSTTRTAVRHKINRGGKMRGANSISVDYENDQCQVPLRAEVDTRLIAKEYAYLGHDTYTAFDAALQGAYLSQSYLNTTSRWPLFLIARTLAARTSHMVRRISLKIRSAVAKKHIPATPHISVVLGVYNTIAGSKILQVITKRRLARRDGCSYESMRLQPMTFVTFDKSECTMLKDGMARDTLYIIKPSHGEKGQGIILARGRSRAMRDIFNSSCCTTSRPAFIVQEYLTSPMLIHGRKFDLRAYMLIGSTRPFNVFFRAGYVRRSLTAFNFTSLQMDGHLTNSFVQLQLEGYNGDEHVWSMSRLREYLEVASGVAPRGWVDKKLLPHMARVARLLFESARPKLVRQNGAFQLIGLDFMIERNLQIHFIEANAAPGMGNQSTWKSSFSQRISSDAFRLVHILQTNPASLAKLKVGDKANGFQLIYSERNDRCLATQVLGASATPSEIEAFVVGLYNVCRRFGSSKLAMDTPAVNLSGGVQIEDAIAAEEEKKGEFEEGGNSIAIINEVRNGDNVDAVQGPNAHVLDEMDVCEEGLDVDVSGADTASPEPVGADASEAADVYSVDENDPGEVITDVGDGVDIDDSEIVIEDGSATGEECMIEREADAWANEEDTLGCLLSV* # ORIGINAL: g14236.t1 original gene structure, not modified by PASA NODE_1620_length_10163_cov_42.5414 AUGUSTUS gene 2398 2952 . + . ID=g14236;Name=g14236.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS mRNA 2398 2952 . + . ID=g14236.t1;Parent=g14236;Name=g14236.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 2398 2952 . + . ID=g14236.t1.exon1;Parent=g14236.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 2398 2952 . + 0 ID=cds.g14236.t1;Parent=g14236.t1 #PROT g14236.t1 g14236 MAEIDLMRSVPPHVNVVSLLGVCTTSEPTCIVLEYAEHGDLRHYIQVGKANFTVSDFSSFCVDIARGMSHIANCGIVYRDLAARNCMVVAGPRAPAPEEDTCKLSPRGNVTIKIGDFRLSRDASSADYYKAKSRTKLPIKWMAPESITHRVHTHASDVWSHGITMWEIFSRGCKPYPGLENHGL* # ORIGINAL: g14237.t1 original gene structure, not modified by PASA NODE_1620_length_10163_cov_42.5414 AUGUSTUS gene 3017 3235 . + . ID=g14237;Name=g14237.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS mRNA 3017 3235 . + . ID=g14237.t1;Parent=g14237;Name=g14237.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 3017 3235 . + . ID=g14237.t1.exon1;Parent=g14237.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 3017 3235 . + 0 ID=cds.g14237.t1;Parent=g14237.t1 #PROT g14237.t1 g14237 MESCWRRLPETRPTFEQLVARMRRSLAGGEAAAYGSGVRGGDDNSFSHLGVGKLTPSITRMRSSFPICRTCK* # ORIGINAL: g14235.t1 original gene structure, not modified by PASA NODE_1620_length_10163_cov_42.5414 AUGUSTUS gene 578 1798 . - . ID=g14235;Name=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS mRNA 578 1798 . - . ID=g14235.t1;Parent=g14235;Name=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 1743 1798 . - . ID=g14235.t1.exon1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 1743 1798 . - 0 ID=cds.g14235.t1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 1501 1631 . - . ID=g14235.t1.exon2;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 1501 1631 . - 1 ID=cds.g14235.t1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 1270 1299 . - . ID=g14235.t1.exon3;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 1270 1299 . - 2 ID=cds.g14235.t1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 1059 1100 . - . ID=g14235.t1.exon4;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 1059 1100 . - 2 ID=cds.g14235.t1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 849 889 . - . ID=g14235.t1.exon5;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 849 889 . - 2 ID=cds.g14235.t1;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS exon 578 649 . - . ID=g14235.t1.exon6;Parent=g14235.t1 NODE_1620_length_10163_cov_42.5414 AUGUSTUS CDS 578 649 . - 0 ID=cds.g14235.t1;Parent=g14235.t1 #PROT g14235.t1 g14235 MERFVDVGRKIVAIGRNYKDHALELGNEVPKDPVIFLKPTSSYVREGGSVEIPAGRTELHHEVELGVVIGKKGRDIHIDNAMDYVAGYALALDMTDRVAQDVLKKKGLPWTLAKGLDTFCPIR* # ORIGINAL: g1845.t1 original gene structure, not modified by PASA NODE_4040_length_2296_cov_36.3872 AUGUSTUS gene 330 2042 . + . ID=g1845;Name=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS mRNA 330 2042 . + . ID=g1845.t1;Parent=g1845;Name=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS exon 330 467 . + . ID=g1845.t1.exon1;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS CDS 330 467 . + 0 ID=cds.g1845.t1;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS exon 742 807 . + . ID=g1845.t1.exon2;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS CDS 742 807 . + 0 ID=cds.g1845.t1;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS exon 1204 1316 . + . ID=g1845.t1.exon3;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS CDS 1204 1316 . + 0 ID=cds.g1845.t1;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS exon 1520 1707 . + . ID=g1845.t1.exon4;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS CDS 1520 1707 . + 1 ID=cds.g1845.t1;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS exon 1933 2042 . + . ID=g1845.t1.exon5;Parent=g1845.t1 NODE_4040_length_2296_cov_36.3872 AUGUSTUS CDS 1933 2042 . + 2 ID=cds.g1845.t1;Parent=g1845.t1 #PROT g1845.t1 g1845 VVPTLAPSMDIQISSNFERYLYYLADENPTQLSTWMEDFKSSGALKIDGELLLRAQTDFTSWAVPDTEIQSIIARYFKERDYLLCPHSATGVFAAEQYRAQQGAGSPIVISLATAHPAKFGAAIVSAIGSDPLMPDELSKLLKLSTRRTDALGSVEYIKRLIEITLAKEECISQQKIVRVGAFAATALVVALTLLRRYKTGRWL* # ORIGINAL: g13004.t1 original gene structure, not modified by PASA NODE_4308_length_1842_cov_30.6876 AUGUSTUS gene 347 1772 . + . ID=g13004;Name=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS mRNA 347 1772 . + . ID=g13004.t1;Parent=g13004;Name=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS exon 347 493 . + . ID=g13004.t1.exon1;Parent=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS CDS 347 493 . + 0 ID=cds.g13004.t1;Parent=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS exon 988 1216 . + . ID=g13004.t1.exon2;Parent=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS CDS 988 1216 . + 0 ID=cds.g13004.t1;Parent=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS exon 1438 1772 . + . ID=g13004.t1.exon3;Parent=g13004.t1 NODE_4308_length_1842_cov_30.6876 AUGUSTUS CDS 1438 1772 . + 2 ID=cds.g13004.t1;Parent=g13004.t1 #PROT g13004.t1 g13004 MYNTARDLIRGKSHSLTELALTQLNVDRQEVDADRIPQFYSNSPDLLRLIEHCERDAQLCMSLCHRLLVIPLTKQLTCLAGNVWSRTFIGGRAERNEHLLLHEFHRRKFICPDKQTTAMKKAAALVLEEEEEAGEEEGAPKRGRKEEKSRRRKAAYAGGLVLEPKKGFYDKFVIMLDFNSLYPSIIQEYNICFTTVAPPVEDPVTHEITKAAVVPEAGVEQGVLPKILATLVERRRQ # PASA_UPDATE: g8701.t1, single gene model update, valid-1, status:[pasa:asmbl_515,status:3], valid-1 NODE_1137_length_13643_cov_39.0667 . gene 960 5463 . - . ID=g8701;Name=g8701.t1 NODE_1137_length_13643_cov_39.0667 . mRNA 960 5463 . - . ID=g8701.t1;Parent=g8701;Name=g8701.t1 NODE_1137_length_13643_cov_39.0667 . five_prime_UTR 5061 5463 . - . ID=g8701.t1.utr5p1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . five_prime_UTR 4656 4774 . - . ID=g8701.t1.utr5p2;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 5061 5463 . - . ID=g8701.t1.exon1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 4590 4774 . - . ID=g8701.t1.exon2;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 4590 4655 . - 0 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 4183 4320 . - . ID=g8701.t1.exon3;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 4183 4320 . - 0 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 3916 4010 . - . ID=g8701.t1.exon4;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 3916 4010 . - 0 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 3695 3737 . - . ID=g8701.t1.exon5;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 3695 3737 . - 1 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 3549 3582 . - . ID=g8701.t1.exon6;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 3549 3582 . - 0 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 3338 3392 . - . ID=g8701.t1.exon7;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 3338 3392 . - 2 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 3083 3156 . - . ID=g8701.t1.exon8;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 3083 3156 . - 1 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 2756 2834 . - . ID=g8701.t1.exon9;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 2756 2834 . - 2 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 2453 2559 . - . ID=g8701.t1.exon10;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 2453 2559 . - 1 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 2161 2311 . - . ID=g8701.t1.exon11;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 2161 2311 . - 2 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 1912 2000 . - . ID=g8701.t1.exon12;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 1912 2000 . - 1 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . exon 960 1803 . - . ID=g8701.t1.exon13;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . CDS 1283 1803 . - 2 ID=cds.g8701.t1;Parent=g8701.t1 NODE_1137_length_13643_cov_39.0667 . three_prime_UTR 960 1282 . - . ID=g8701.t1.utr3p1;Parent=g8701.t1 #PROT g8701.t1 g8701 MSHFSMAPMPPPYGEEAKFFEQLLSFCKHSMVMINSLHHAPGKADIAPIRDQLRILADAASKLTDRTDAGRGFFRPYENAMSPMDSGMKMMPGPSPLPQGRPFPGHPQDEFGSKMHPMQPPQFYKAESMPAMAPFVHPPRRDGRSYSLQVRQQPIHGSTGGIGVDGAKGNRRPIDPAPILQLHIRDAEGRNLDACTGLDPYLICTAELYSAENNANRDYMSSKRNIQNLTGILCSSMHRIKDLAIDGQGNELTSNFYVFSDLSVREKGKYFLKFCLYLLHGDESEFLSATSSDVFEVLSTRDFQARGGLGVSTPLSVKVSYQGVKLQLRSSHEAKGDLKPPPPGINRPHWIPEKFSADWVAYYEQGASGQPHPQSHPPAMVYSAMPPMGGMLPHHHGHLPHQHQPHQAQHQMGMPMMQPMMMQPMQGMQSMQSMQPMQSMQPMQAMQGLQGMQPMQGMQGMQHDGYDGMARFPVEGQQQFFMK* # PASA_UPDATE: g8703.t1, single gene model update, valid-1, status:[pasa:asmbl_514,status:12], valid-1 NODE_1137_length_13643_cov_39.0667 . gene 12653 13595 . + . ID=g8703;Name=g8703.t1 NODE_1137_length_13643_cov_39.0667 . mRNA 12653 13595 . + . ID=g8703.t1;Parent=g8703;Name=g8703.t1 NODE_1137_length_13643_cov_39.0667 . five_prime_UTR 12653 12719 . + . ID=g8703.t1.utr5p1;Parent=g8703.t1 NODE_1137_length_13643_cov_39.0667 . exon 12653 13595 . + . ID=g8703.t1.exon1;Parent=g8703.t1 NODE_1137_length_13643_cov_39.0667 . CDS 12720 13595 . + 0 ID=cds.g8703.t1;Parent=g8703.t1 #PROT g8703.t1 g8703 MPSATTNRIFYEPPRLCVWTDISPQTAHALISASKSPQRRYQVICDIFELSPSGDESGRDAIIADLYQGMVNFCLDKGYQAHQLSALVSIVKRLHGYCMLGFERSMEDGFSYFKEIMLRHSIQRPPKSEAIYSLKELQAINDHVLLTYFRHYKLYNYTFGSRVKQPVEMPTVIERAVIDDADGASSVLGDFDSGVTSTNDFGADGLGGIPSWVSAASPLVTSDEFRPMSAMVEGLTTGLAVPSSASFAGSILSSQSQSAVEGTERPPSTTFGSGDGSTVDPPQEPAPLGKN* # ORIGINAL: g8702.t1 original gene structure, not modified by PASA NODE_1137_length_13643_cov_39.0667 AUGUSTUS gene 6670 12268 . - . ID=g8702;Name=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS mRNA 6670 12268 . - . ID=g8702.t1;Parent=g8702;Name=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 12173 12268 . - . ID=g8702.t1.exon1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 12173 12268 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 11882 12012 . - . ID=g8702.t1.exon2;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 11882 12012 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 11652 11718 . - . ID=g8702.t1.exon3;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 11652 11718 . - 1 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 11268 11471 . - . ID=g8702.t1.exon4;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 11268 11471 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 10894 11028 . - . ID=g8702.t1.exon5;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 10894 11028 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 10509 10634 . - . ID=g8702.t1.exon6;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 10509 10634 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 9879 10253 . - . ID=g8702.t1.exon7;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 9879 10253 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 9507 9752 . - . ID=g8702.t1.exon8;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 9507 9752 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 9176 9319 . - . ID=g8702.t1.exon9;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 9176 9319 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 8896 9070 . - . ID=g8702.t1.exon10;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 8896 9070 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 8552 8700 . - . ID=g8702.t1.exon11;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 8552 8700 . - 2 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 8268 8350 . - . ID=g8702.t1.exon12;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 8268 8350 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 7696 7990 . - . ID=g8702.t1.exon13;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 7696 7990 . - 1 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 7333 7470 . - . ID=g8702.t1.exon14;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 7333 7470 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 6988 7092 . - . ID=g8702.t1.exon15;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 6988 7092 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 6670 6864 . - . ID=g8702.t1.exon16;Parent=g8702.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 6670 6864 . - 0 ID=cds.g8702.t1;Parent=g8702.t1 #PROT g8702.t1 g8702 MAARYEDEDEAFQDEETSVLTFPPDVEAAISQVLPSTDPLDRADFNPVEYINTIFPNEQSLSQIDPIASKFKLKIRRLDDKIRVVVRGQSNVGDEGRRALGEAQRGIQDLFTRIKDIKRKADTSERMVNEITRDIKQLDNAKKHLTASIVALNHLYMLVGSLDTLKTLSKQRQYKEISQVLQVCVNVFGHFDGYRHIKHIADLAERIATLKTQLRKQIMEDFETNVNAKGNPNPQQVQVLNEACYAVDVLDPDFKTDIVGWYIKRRLVDYNNLFHETLDTAQPEKIDRRYAWLKRALESFEADCPHLFPDHWKMSELIALDFCRITKRDLGSVLQQRKATLDVKLLLFAVKKTLKFEFFLTQRYYPQVADKMKIKTEQSHRRGPSRGGPKDHDAEDFDGADSRDSMESARDNDDAASQRSAESKESVRDRFLKYKKELEKQKGGGKDPAAEKEKEKAAIEIKSPFAGAVSSVFEPFMSIYNEETDRKLSEMIGGFATNFKQSVPEEERGHPAKVLPSCADIFLFYRDALSQLAPLSTAEPMMGLAVVFKKYLRMYAQKVLLGNIPKGSAPAPPTSLVDKATPLTSSKDEVRLTAAEVHTTCCILNSAEYCLETTRQLQGKLKEKIDEEFRKKIDMTDEEDLFDEVINQAMTTMVRSLETMCDPALSAMARVTWATIEAVGDQSPYVGVVQQSIVHLVPSVRDGIATGKYYTAFCNKFVNSFIPRVVNQIFKCKPISQVGAEQLLLDVQSIKASLLELPSVGSPIASNPPASYSRFVAKNMGRAEMIIKVVLTPFEPPEACVHNYINLVGDADLSTFQKILDIKGLKKSDRDVLVDLFKKLQPQAAVAPNAQASAPAAAASKSEDSLSDAFRMAAPGILKLEKLIKRL* # ORIGINAL: g8700.t1 original gene structure, not modified by PASA NODE_1137_length_13643_cov_39.0667 AUGUSTUS gene 86 693 . + . ID=g8700;Name=g8700.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS mRNA 86 693 . + . ID=g8700.t1;Parent=g8700;Name=g8700.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS exon 86 693 . + . ID=g8700.t1.exon1;Parent=g8700.t1 NODE_1137_length_13643_cov_39.0667 AUGUSTUS CDS 86 693 . + 2 ID=cds.g8700.t1;Parent=g8700.t1 #PROT g8700.t1 g8700 NRDSLFVLCAEPDWLTRAGKEDPRVGRLHALLEQVRTEAAKIGRSGVVSVKNMAPEFISQMRECLSVWNDVYPSAFTKVRLKQYVPGGGLDKVGNPWPCVVWDSRARIEDANAPFCTMSGFLHAELMGPQGMASGLFVSDDANSVAMFHMVAVNNPIAFYEIPVALKVKSGFKISGRLKVVCVRTEPDGRHQRSIGYFCAE* # PASA_UPDATE: g14475.t1, single gene model update, valid-1, status:[pasa:asmbl_7490,status:3], valid-1 NODE_462_length_23284_cov_41.6024 . gene 13894 16599 . + . ID=g14475;Name=g14475.t1 NODE_462_length_23284_cov_41.6024 . mRNA 13894 16599 . + . ID=g14475.t1;Parent=g14475;Name=g14475.t1 NODE_462_length_23284_cov_41.6024 . five_prime_UTR 13894 13950 . + . ID=g14475.t1.utr5p1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 13894 14049 . + . ID=g14475.t1.exon1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 13951 14049 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 14227 14347 . + . ID=g14475.t1.exon2;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 14227 14347 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 14512 14696 . + . ID=g14475.t1.exon3;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 14512 14696 . + 2 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 14839 14919 . + . ID=g14475.t1.exon4;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 14839 14919 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 15394 15471 . + . ID=g14475.t1.exon5;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 15394 15471 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 15766 15780 . + . ID=g14475.t1.exon6;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 15766 15780 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . exon 15997 16599 . + . ID=g14475.t1.exon7;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . CDS 15997 16401 . + 0 ID=cds.g14475.t1;Parent=g14475.t1 NODE_462_length_23284_cov_41.6024 . three_prime_UTR 16402 16599 . + . ID=g14475.t1.utr3p1;Parent=g14475.t1 #PROT g14475.t1 g14475 MSQLPEFFGCEVSAGKPFVWEPEAHIFVLGIRSAALGPVVKGKGRTVLAVEVRDEENKASKYYIGSVSEDSPQIALELNFSDKVTFSVEGPNAVHITGNIEAIVDFGDEFDEDEDSDEDEDEDEDMEDADSSEEKEITVASKKRPAAGPADTKSAKKPKIEEIEDDEDEDDEDEDDEEEEEVKPAPKGKPQAKAAPAAAAPATPAKKDAAKSNANTPAQKQAAKPATPAPAAAAATPAKKDAAKAEPKTPATATKKTDAKSAASTPVANGKKEAPATPATGKKGEGKESKPATPASGEFKCVECNRAFAQEAALKQHNNQKHGAKKE* # PASA_UPDATE: g14476.t1, single gene model update, valid-1, status:[pasa:asmbl_7486,status:3], valid-1 NODE_462_length_23284_cov_41.6024 . gene 19556 22859 . + . ID=g14476;Name=g14476.t1 NODE_462_length_23284_cov_41.6024 . mRNA 19556 22859 . + . ID=g14476.t1;Parent=g14476;Name=g14476.t1 NODE_462_length_23284_cov_41.6024 . five_prime_UTR 19556 19658 . + . ID=g14476.t1.utr5p1;Parent=g14476.t1 NODE_462_length_23284_cov_41.6024 . exon 19556 22859 . + . ID=g14476.t1.exon1;Parent=g14476.t1 NODE_462_length_23284_cov_41.6024 . CDS 19659 22736 . + 0 ID=cds.g14476.t1;Parent=g14476.t1 NODE_462_length_23284_cov_41.6024 . three_prime_UTR 22737 22859 . + . ID=g14476.t1.utr3p1;Parent=g14476.t1 #PROT g14476.t1 g14476 MRHGVEAGTTRLRRQRCLLSIDSPLTLVILLFVCLSNFASSSPISERGFVRAEKNANCLVENCVTSAVSVSTGGNGYFLEGTVKATVTSTDDQGTLEGPIVFDRDVNGGIRSATQRFKVCQSAVWEQLCVMGNCVGGKNFMGWCGAGRDITVILTGEMCGKGTTWQTAQTADQCKCAGGFQYVPGTDGQCAPCPQNTYKAAIDNSACIGCGAGASLKASSAAKSDCLCDAGSFFSDGANVPCTNCPVGTYMDTAQNHASKCTACPEYATTKKPGSTQLGDCECNSDLYFRVNVGSGFICKAIAIPPAPKAPRINGKTAESVHIEWDKVSDASGPIVKYHVFCIPTNNGEFAKQDTVEGTVSQYHFQGLKANSRYRFYVVAQTKAGDSEGESKWDFTLDVGCIAGMCGPGQYLQKDAVSCTACPVGSFQPTCAFNATCTQCPAGTQTALEATESATDCTLCPSGTYSTQGSRCASCAEGIECPRGSSTSTQRLWSEQEAGTTASEIHIGHGVPAQDANGVDSSDDGPLDKKYVGTIIAAAFACAAVVLVILALRFSCGRRCLRRIDVIIESASRDIVVKQGGGEDGSVATAGSAPIISNSPGTRLRVLKNVNMLRSVMSLCGFVSIIALWTYTSYDFAKNRYVEERTSIPISAVKVLRADGSVISLAGDPPMPTVELLLLGIPEAAADVGGEITLDTGASDGSGAGPEAVSARKYSCSVRSVARIDAADYSRVTEPLGEGAQAGLGVLLSSSEVAMCKTSGCLYIVADPPKRAQLYGSTIVTFSIKSLRGVALYAQHARVRLSGPSWKPGVPTWVTYSRPLPNTSGRTGDQSPLGAQSLWIALIQTRALYRAPNGDVVNIGYEMFPSRDAWEEDAPKQSWTSTGTNSTAYAGPLVFGVRFTVQSTAVEIRKVERITVVQFLTSLFSFLGGIIALYAFVTSVALKTSISCCNRQFAEDPDDFDARHGDRQAVGQPSSDKDSQGKRGLSVRGTLVSGFFRDRKGSTSHTEAGAVDATCPLLQPVVDSD* # PASA_UPDATE: g14472.t1, single gene model update, valid-1, status:[pasa:asmbl_7487,status:12], valid-1 NODE_462_length_23284_cov_41.6024 . gene 101 1395 . - . ID=g14472;Name=g14472.t1 NODE_462_length_23284_cov_41.6024 . mRNA 101 1395 . - . ID=g14472.t1;Parent=g14472;Name=g14472.t1 NODE_462_length_23284_cov_41.6024 . five_prime_UTR 1341 1395 . - . ID=g14472.t1.utr5p1;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . exon 1208 1395 . - . ID=g14472.t1.exon1;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . CDS 1208 1340 . - 0 ID=cds.g14472.t1;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . exon 1012 1073 . - . ID=g14472.t1.exon2;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . CDS 1012 1073 . - 2 ID=cds.g14472.t1;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . exon 683 769 . - . ID=g14472.t1.exon3;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . CDS 683 769 . - 0 ID=cds.g14472.t1;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . exon 101 278 . - . ID=g14472.t1.exon4;Parent=g14472.t1 NODE_462_length_23284_cov_41.6024 . CDS 101 278 . - 0 ID=cds.g14472.t1;Parent=g14472.t1;3_prime_partial=true #PROT g14472.t1 g14472 MKVTSKFIQRFHLDKKHQLLSSRNVQLVAEFFNMLDLKNTGSLDDIQFCAFMKSATDLTDTRIYKVFDMLDVDASGSLEFDEFYLLICILIAIKDKEEKQFLFRHSRTVFELLDEDGSDSVSPLEFETFGFLLNFYGTAITQIFKEFDISGDK # ORIGINAL: g14474.t1 original gene structure, not modified by PASA NODE_462_length_23284_cov_41.6024 AUGUSTUS gene 8585 13024 . - . ID=g14474;Name=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS mRNA 8585 13024 . - . ID=g14474.t1;Parent=g14474;Name=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 12959 13024 . - . ID=g14474.t1.exon1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 12959 13024 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 12685 12823 . - . ID=g14474.t1.exon2;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 12685 12823 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 12444 12557 . - . ID=g14474.t1.exon3;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 12444 12557 . - 2 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 12159 12252 . - . ID=g14474.t1.exon4;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 12159 12252 . - 2 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 11787 11871 . - . ID=g14474.t1.exon5;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 11787 11871 . - 1 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 11449 11537 . - . ID=g14474.t1.exon6;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 11449 11537 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 11058 11175 . - . ID=g14474.t1.exon7;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 11058 11175 . - 1 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 10601 10674 . - . ID=g14474.t1.exon8;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 10601 10674 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 10105 10273 . - . ID=g14474.t1.exon9;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 10105 10273 . - 1 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 9284 9831 . - . ID=g14474.t1.exon10;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 9284 9831 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 9067 9148 . - . ID=g14474.t1.exon11;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 9067 9148 . - 1 ID=cds.g14474.t1;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS exon 8585 8680 . - . ID=g14474.t1.exon12;Parent=g14474.t1 NODE_462_length_23284_cov_41.6024 AUGUSTUS CDS 8585 8680 . - 0 ID=cds.g14474.t1;Parent=g14474.t1 #PROT g14474.t1 g14474 MGKLNVNVLRYMSRDQFRVLTSVEMGMKNHELVPASLIASIAGLRHGGCHKILLELARNRLVAYDNVKYPGYRLTNAGYDYLALKTLTNRDAVASVGNQIGVGKESDIYIVANDNDEQLVLKLHRLGRTSFRAVKANRDYLKNPKQSASWLYLSRLAAMREFAYMKALYDHGFPVPRPVDFNRHCIIMELVSGYPLCQVRDLANPGRVFSELMELILKLASYGLIHGDFNEFNLMVNDDDTIRMIDFPQMISTSHPNAEFYFDRDVRCVVEFFVRRYHYNPKHVPSFATDVSREINLDIEIAASGYLRAHVADIGQGVTLDQMTSDVLKATDAASAARMSRAVDGAGADEESEDDSESEEDYGDEVPDAPESDGEGEASGEAAGGDAALVENKVPILSKEQGSDEVIKVTSAHGAGGDENATQTTADDVRRGKVDALESLEGVSNDDDASEESSSEDEDDDDDAAEEMEGLSLGNRQHRPYRDALPRDDDGKTAAPESTATAKTGAGIDMNYVRERVKRNIGKKAKLQSLKGARPNLAKGKDKKTRAKDMVRDSSVF* # PASA_UPDATE: g14473.t1, single gene model update, valid-1, status:[pasa:asmbl_7489,status:3], valid-1 NODE_462_length_23284_cov_41.6024 . gene 2288 7344 . + . ID=g14473;Name=g14473.t1 NODE_462_length_23284_cov_41.6024 . mRNA 2288 7344 . + . ID=g14473.t1;Parent=g14473;Name=g14473.t1 NODE_462_length_23284_cov_41.6024 . five_prime_UTR 2288 2539 . + . ID=g14473.t1.utr5p1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 2288 2544 . + . ID=g14473.t1.exon1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 2540 2544 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 2866 3028 . + . ID=g14473.t1.exon2;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 2866 3028 . + 1 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 3271 3402 . + . ID=g14473.t1.exon3;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 3271 3402 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 3692 3778 . + . ID=g14473.t1.exon4;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 3692 3778 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 4147 4237 . + . ID=g14473.t1.exon5;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 4147 4237 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 4585 4700 . + . ID=g14473.t1.exon6;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 4585 4700 . + 2 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 4933 5022 . + . ID=g14473.t1.exon7;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 4933 5022 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 5305 5444 . + . ID=g14473.t1.exon8;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 5305 5444 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 5709 5844 . + . ID=g14473.t1.exon9;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 5709 5844 . + 1 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 6195 6332 . + . ID=g14473.t1.exon10;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 6195 6332 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . exon 6920 7344 . + . ID=g14473.t1.exon11;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . CDS 6920 6970 . + 0 ID=cds.g14473.t1;Parent=g14473.t1 NODE_462_length_23284_cov_41.6024 . three_prime_UTR 6971 7344 . + . ID=g14473.t1.utr3p1;Parent=g14473.t1 #PROT g14473.t1 g14473 MTEQVVHQLQAHLFQIDPVTKKNWLPLGSNAGLTVTFYYDAVKKSHRIVGTDATGKTLLASNVANNMAFAKSSAKFGQWEDHKEKTIYGAGFSSEAELTAFSDVFVQAVKTAPGDVSPSIAVKSDGEAETSKPKGRALYDFAGTDETHLSFKSGQIITAVSATKSEGWSRGTVDDKTGRFPTAYVQIIQDKPPSVAEKKYKDERPRSEMPPSQKSLAPTAPESRSRSPSVGATGSEETVRELRAQLEQTRKELEQSKKDMDLARKELQSKEDRESLAAIASGGANSTTEIISNQLLQVKNENDKLKAALAQSSMNQQQWEAELQTLRNNNARLMTALQESAANVDLWVQQITSYTEGSSKMSKKLQEIEQIQERFAAVLRGD* # PASA_UPDATE: g7971.t1, single gene model update, valid-1, status:[pasa:asmbl_7510,status:12], valid-1 NODE_4665_length_1354_cov_33.1658 . gene 2 1133 . + . ID=g7971;Name=g7971.t1 NODE_4665_length_1354_cov_33.1658 . mRNA 2 1133 . + . ID=g7971.t1;Parent=g7971;Name=g7971.t1 NODE_4665_length_1354_cov_33.1658 . five_prime_UTR 2 2 . + . ID=g7971.t1.utr5p1;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . exon 2 128 . + . ID=g7971.t1.exon1;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . CDS 3 128 . + 0 ID=cds.g7971.t1;Parent=g7971.t1;5_prime_partial=true NODE_4665_length_1354_cov_33.1658 . exon 326 419 . + . ID=g7971.t1.exon2;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . CDS 326 419 . + 0 ID=cds.g7971.t1;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . exon 639 721 . + . ID=g7971.t1.exon3;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . CDS 639 721 . + 2 ID=cds.g7971.t1;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . exon 1032 1133 . + . ID=g7971.t1.exon4;Parent=g7971.t1 NODE_4665_length_1354_cov_33.1658 . CDS 1032 1133 . + 0 ID=cds.g7971.t1;Parent=g7971.t1 #PROT g7971.t1 g7971 PICLSSFTTELVALCELIGPYGVRSLDDRLLKAVLDEAAQLKGLVINNGDGILLIQNSWDDPAKSAEGIRRIKGMEDFLTRLTRIGVLLCFRRDLLDALATVMRQRVSPIYNVIRSLHENTPAGVDPQVRHCFD* # ORIGINAL: g13743.t1 original gene structure, not modified by PASA NODE_2522_length_6011_cov_41.1824 AUGUSTUS gene 4340 5616 . - . ID=g13743;Name=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS mRNA 4340 5616 . - . ID=g13743.t1;Parent=g13743;Name=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 5454 5616 . - . ID=g13743.t1.exon1;Parent=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 5454 5616 . - 0 ID=cds.g13743.t1;Parent=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 4926 5291 . - . ID=g13743.t1.exon2;Parent=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 4926 5291 . - 2 ID=cds.g13743.t1;Parent=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 4340 4596 . - . ID=g13743.t1.exon3;Parent=g13743.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 4340 4596 . - 2 ID=cds.g13743.t1;Parent=g13743.t1 #PROT g13743.t1 g13743 MELTKTEAQKLLYQGQYDLAIPAAMQALRFSIDVYGSAAIELVPSYLLLGEASIGMGRFEQAEEYLSHAKWAVLKAPECDPMVKSRLYRNFGLLYEAQGSMGLALQQLAADVYHSSLVYGADHISTSGGFYHLGNVLWRQGNSAAALSQYDVVIKIWNTYLTKSVITNVGRDADSLDEAQEAEAVQMLRQILAVREEQYGHTHAITLSTCHTLAMLHYALCDPGKAREYALRAMGGTSSKDELRALRVLLDKIENDRRQAH* # PASA_UPDATE: g13741.t1, single gene model update, valid-1, status:[pasa:asmbl_4494,status:12], valid-1 NODE_2522_length_6011_cov_41.1824 . gene 145 1262 . + . ID=g13741;Name=g13741.t1 NODE_2522_length_6011_cov_41.1824 . mRNA 145 1262 . + . ID=g13741.t1;Parent=g13741;Name=g13741.t1 NODE_2522_length_6011_cov_41.1824 . exon 145 289 . + . ID=g13741.t1.exon1;Parent=g13741.t1 NODE_2522_length_6011_cov_41.1824 . CDS 145 289 . + 0 ID=cds.g13741.t1;Parent=g13741.t1;5_prime_partial=true NODE_2522_length_6011_cov_41.1824 . exon 440 528 . + . ID=g13741.t1.exon2;Parent=g13741.t1 NODE_2522_length_6011_cov_41.1824 . CDS 440 528 . + 2 ID=cds.g13741.t1;Parent=g13741.t1 NODE_2522_length_6011_cov_41.1824 . exon 919 1262 . + . ID=g13741.t1.exon3;Parent=g13741.t1 NODE_2522_length_6011_cov_41.1824 . CDS 919 1044 . + 0 ID=cds.g13741.t1;Parent=g13741.t1 NODE_2522_length_6011_cov_41.1824 . three_prime_UTR 1045 1262 . + . ID=g13741.t1.utr3p1;Parent=g13741.t1 #PROT g13741.t1 g13741 RLRGIRSGDAQPVFPAVYGVLERDQFYESVSHSVWGGSSGHDAPLIAYDALLGSNGSWEELLKRGVLHGGDNDSTGILCCGWYGAIFGFTGVPLCNYDECEYKERSLDLADKLCDRFGN* # ORIGINAL: g13742.t1 original gene structure, not modified by PASA NODE_2522_length_6011_cov_41.1824 AUGUSTUS gene 1836 4016 . + . ID=g13742;Name=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS mRNA 1836 4016 . + . ID=g13742.t1;Parent=g13742;Name=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 1836 2021 . + . ID=g13742.t1.exon1;Parent=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 1836 2021 . + 0 ID=cds.g13742.t1;Parent=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 2313 2413 . + . ID=g13742.t1.exon2;Parent=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 2313 2413 . + 0 ID=cds.g13742.t1;Parent=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS exon 3071 4016 . + . ID=g13742.t1.exon3;Parent=g13742.t1 NODE_2522_length_6011_cov_41.1824 AUGUSTUS CDS 3071 4016 . + 1 ID=cds.g13742.t1;Parent=g13742.t1 #PROT g13742.t1 g13742 MRVCVDSANAASRPKGSHGEHANSADRHDHVAHVRETLMSAALMGVESLILNYQSLDVIPNEIEALSGHLHHLSVKGNKLHALPPAVGHLANLTELLPVEVCMLSSLRKLHVAYNRLTSLPECLWRLPFLDTVSARCNALTSLPPDISLCRSLTFLDVASNRITSVPRDLPRMHSLRDLSFRCNDIAALPPSVGCIAHLESLDVAGNRRLDALPASLLVLPSLSFFSYDPVRPREALTHAVPDATADMHLDSPPLPTAIQPGAVPSLLELASRSASICPSPGFKGNATPNNCATGSVECIGVCCVRPFDSNCIRGCPADPTKEAEHTVRATQHCAGAASRESLPVLPQRLQWRVIPSGRCMRCLQPFVGEAVTAVIDAGSGRVVSDGGWRASGLFTHYYCSQYCRAHGQG* # PASA_UPDATE: g5441.t1, single gene model update, valid-1, status:[pasa:asmbl_4946,status:12], valid-1 NODE_2757_length_5207_cov_40.4787 . gene 2063 5134 . - . ID=g5441;Name=g5441.t1 NODE_2757_length_5207_cov_40.4787 . mRNA 2063 5134 . - . ID=g5441.t1;Parent=g5441;Name=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 5013 5134 . - . ID=g5441.t1.exon1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 5013 5134 . - 0 ID=cds.g5441.t1;Parent=g5441.t1;5_prime_partial=true NODE_2757_length_5207_cov_40.4787 . exon 4650 4827 . - . ID=g5441.t1.exon2;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 4650 4827 . - 1 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 4360 4467 . - . ID=g5441.t1.exon3;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 4360 4467 . - 0 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 3822 3995 . - . ID=g5441.t1.exon4;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 3822 3995 . - 0 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 3475 3603 . - . ID=g5441.t1.exon5;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 3475 3603 . - 0 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 3193 3309 . - . ID=g5441.t1.exon6;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 3193 3309 . - 0 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 2763 2940 . - . ID=g5441.t1.exon7;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 2763 2940 . - 0 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . exon 2063 2489 . - . ID=g5441.t1.exon8;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . CDS 2311 2489 . - 2 ID=cds.g5441.t1;Parent=g5441.t1 NODE_2757_length_5207_cov_40.4787 . three_prime_UTR 2063 2310 . - . ID=g5441.t1.utr3p1;Parent=g5441.t1 #PROT g5441.t1 g5441 LNEIAETDAIPLDTRERFFRDARQAFGRSALVLSGGASLGMYHFGVVKCLYEFGLLPRVISGASIGSLVAAFLGTLRDDELPLFFKPNTIKFGAFDRLGKGSARRKLSRFLKTGVLMDIGKLEQFIRENIGDVTFQEAYNRTGRIINVSVASTQKYEMPRLLNYLTAPNVYLRSAALASCASPGLYTPVVLMAKDHNGNEVPWNPSSRRWGDGSLESDLPMARLAELFNVNHFIVSQVNPHVVPFMHNTKKTWTRSPLLEGIKTLILSEMHHRVLQAAEFGMFPKIFQPVFTQKYEGDVTIVPDIGVLSVFKFLSNPNEVDLRACMQLGERSTWPYISIIRTRCKIELTLDACFRRVRQARAAAERDTTAHESAVDSFDRIETANDPPYQRRSM* # PASA_UPDATE: g5440.t1, single gene model update, valid-1, status:[pasa:asmbl_4945,status:3], valid-1 NODE_2757_length_5207_cov_40.4787 . gene 320 1761 . + . ID=g5440;Name=g5440.t1 NODE_2757_length_5207_cov_40.4787 . mRNA 320 1761 . + . ID=g5440.t1;Parent=g5440;Name=g5440.t1 NODE_2757_length_5207_cov_40.4787 . five_prime_UTR 320 435 . + . ID=g5440.t1.utr5p1;Parent=g5440.t1 NODE_2757_length_5207_cov_40.4787 . exon 320 1025 . + . ID=g5440.t1.exon1;Parent=g5440.t1 NODE_2757_length_5207_cov_40.4787 . CDS 436 1025 . + 0 ID=cds.g5440.t1;Parent=g5440.t1 NODE_2757_length_5207_cov_40.4787 . exon 1189 1761 . + . ID=g5440.t1.exon2;Parent=g5440.t1 NODE_2757_length_5207_cov_40.4787 . CDS 1189 1303 . + 1 ID=cds.g5440.t1;Parent=g5440.t1 NODE_2757_length_5207_cov_40.4787 . three_prime_UTR 1304 1761 . + . ID=g5440.t1.utr3p1;Parent=g5440.t1 #PROT g5440.t1 g5440 MTIRGMNKEQQQMQLSLCLYITCMCENMSEGMLLVCMGSSLIAITNAQYLFTHACRYCNWGRDCQDAASRNAAAAASAWGSMAFSLVGVASCLLVGYLKDRLPKKHRASLCISFLSVLVVGLAYLSANAEKMSFNGAIFLLAVCGWGLLGPYSLPGGAFSVDIGGRDLTGTANSLIDSAGALGAFAIMIIKGQMGESWTLIYAVLGIVATFGIFVSCMLWRVDLRRARQETQQQ* # PASA_UPDATE: g9238.t1, single gene model update, valid-1, status:[pasa:asmbl_668,status:3], valid-1 NODE_117_length_38182_cov_45.3675 . gene 30232 33523 . - . ID=g9238;Name=g9238.t1 NODE_117_length_38182_cov_45.3675 . mRNA 30232 33523 . - . ID=g9238.t1;Parent=g9238;Name=g9238.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 33330 33523 . - . ID=g9238.t1.utr5p1;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . exon 32919 33523 . - . ID=g9238.t1.exon1;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . CDS 32919 33329 . - 0 ID=cds.g9238.t1;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . exon 32543 32591 . - . ID=g9238.t1.exon2;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . CDS 32543 32591 . - 0 ID=cds.g9238.t1;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . exon 30232 32335 . - . ID=g9238.t1.exon3;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . CDS 30468 32335 . - 2 ID=cds.g9238.t1;Parent=g9238.t1 NODE_117_length_38182_cov_45.3675 . three_prime_UTR 30232 30467 . - . ID=g9238.t1.utr3p1;Parent=g9238.t1 #PROT g9238.t1 g9238 MLSPRMLPRLKCPVSNRTAKHNEAALAVISPSDSLDVHSFARDMSSSSSLSAAKHVPPPSYPDVVIEQASVQENSHNESSITGSIGENNVQDDDDMVDVNIVEIKEGGAQREASSGSFIELEMNEIDCAWRWKISKQLLTRNKAEFLPFADLPEYHPPRRTLEPPEDDEDEAHTMKERLLDLETRLHKRTKMSRRHIRMLGVSLATVVIVAIVMGVRFGFAMLSSGGVDACARQFSITSLESLSAFASLGCPRVTSLTINGSLLDGGPMSVVFPALATVTDALVIAAWRSNASSVSFPALTHAGTFIISDVKLLSANFPALATIDDFAAERLTLTGGVNFPSLVYASSIAVNDAYTLSINFPVLESVLGNFTLHAARSYGDIIFPSLRSVGMMDIEGPLRVVETAAGGNPVTLKCVALRRLRGFALANLIGVLEIGFPNLKDVQWFSMVSVSFSQYLNLNFVSPISKGNIDLSGLERASYMVFRSVFGMPILNFANLQKAESLLFDGNTVLQTVRCPALQQVGDVCFTSNTNVNNVSFPVLKTAIQGFRFLNNPALVSVTAPSLTAGILQFTLNTALHDISFPAMTRGSIVVGANPMLASVHFPLVASLGIASFFRNTVLSTICLPKLRHLSQAGWLLPAGPSTLFWVIAQSDILGKFNVSLTPGTQLLNVGGALVGGSFSAFDNANLSKIDMGSWLQNAQAILINNNPRLCPSNIRFPSTIEVVCGCTFEDNGVSDHMCDKSAPVGGVSFSCPVPSADCKFRGESITDTSTLPI* # ORIGINAL: g9233.t1 original gene structure, not modified by PASA NODE_117_length_38182_cov_45.3675 AUGUSTUS gene 4720 9987 . + . ID=g9233;Name=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS mRNA 4720 9987 . + . ID=g9233.t1;Parent=g9233;Name=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 4720 6258 . + . ID=g9233.t1.exon1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 4720 6258 . + 0 ID=cds.g9233.t1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 6400 6843 . + . ID=g9233.t1.exon2;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 6400 6843 . + 0 ID=cds.g9233.t1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 6957 7711 . + . ID=g9233.t1.exon3;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 6957 7711 . + 0 ID=cds.g9233.t1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 7917 8087 . + . ID=g9233.t1.exon4;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 7917 8087 . + 1 ID=cds.g9233.t1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 8272 9545 . + . ID=g9233.t1.exon5;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 8272 9545 . + 1 ID=cds.g9233.t1;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 9707 9987 . + . ID=g9233.t1.exon6;Parent=g9233.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 9707 9987 . + 2 ID=cds.g9233.t1;Parent=g9233.t1 #PROT g9233.t1 g9233 MLSLAHFILNRISIASSGTISQQDALTPLEAAFIAGSQLADSVVIFNVNGELSSVAEEETLQSKASLGNFVGGKTSFAVHPSPTASSELYRLASEGKLVAAYAPIESLIQAIPHLYRIAAEGIPVVIHVIVGKADHAAVAAVAQTGFAVVASSTVQDAYNVAVAAHATAVRTSVPFLHLVAVGTTTASSTIVLVDGAVSHKIIPSDVLSAYRTKYAGASREPASATAVPLQPVSAEASRLAFSAVGAAFTETLHALKLDKAIPFQYYGPTSPKTVIVGIAAEGLVDAATNAKFGVVSVRVYRPFDGKAFAAAIPAGVTRVVVVDRTDGAPAAGGLGEGWGQLFLDVSAAALAAPTLSSVAFYSAHVTADALSDAIVAAVAEETSKDAPSLQFAVGKNSVARETGVSHGPASQSTLPYFRMLAQAFGDRLLVADARGHATVWGESSPLPNTPTPEFGYGVHLAAIKKRARVIDTATQIAANPSIGSEQLRTALRAWVAVAHRSADSQQNKAVKEVELLVAAESESHPLIRVLGEQLSLLRNPSRWLVGGEEWGHDIFFSGVHHVIASGEKVNLLIVDTELYGARDQALPARPKRDIGLYAMNYGGAYVASVAVYSSYTQVLRAFIEADSYPGPAVVLAYMPNAKPEANEGSNNALAALRQTKVAVDSGTWPLYRFDPSLEKTGREPFSLDSERIKADLEKFLDRHNHLSEIVRSQPKFDPALASSVEAEVARRREEIENAAVDSYRKLLGGLNGPSRGPLLILFGSDGGNAEKLAKRIDAQAKKLNFASKVSSMNNFGVEALKEVETVVFTISTAGQGEFPTNAREFWKQLVTASASTPGPLASKTKFAVFGLGDKHYWPRPEDAHFYCKAPKDLDARLEASGASRILPIGLGDDQDPEGYETGFKAWIPELWKSLGVTEVVDVSAAPTLTDDQMKINSNYLRGTIAKGLLDETTGALAELDTKIIKFHGSYQQDDRDIREERAAMGLENAFSFMIRVRVPGGIATPAQYLAMDDIAGQYANGTIKLTTRQAFQLHGVVKKELRATIRAINQTLMDTLAACGDVNRNVMCNPLPVLSELHAAAYEFSKQLSAHLSPRTSAYHEIWLDDKQVAGNAVVDVEPLYGPTYLPRKFKIGVAIPPNNDIDVFSQDLGYIAIKGEDGKLAGFNVAVGGGMGMTHNNKKTFPRLGDVLGFCTFEQALDVGEKVMLVQRDFGDRTNRKHARLKYTIEDNGLEWFKERVEEKLGYKLDPARPYKFADNGDRYGWTEGEDGKWHLGLYIEGGRVKDTPEIALRTALREVAQVHKGDFRLTGNQNIMIGNVDAADKASIDSILAKYGVGNGKHSGMRLNSMACVALPTCGLAFAEAERYLPSLIGHLEVELEKAGLRDDAITIRMTGCPNGCARPYISEIAFVGKAPGTYNVYLGGGFAGDRLNKLYKESQTEEQIIAELSPIFHRYAKERKDATEHFGDFVIRAGYVKAVLAGREFHD* # PASA_UPDATE: g9234.t1, single gene model update, valid-1, status:[pasa:asmbl_664,status:3], valid-1 NODE_117_length_38182_cov_45.3675 . gene 10430 15402 . + . ID=g9234;Name=g9234.t1 NODE_117_length_38182_cov_45.3675 . mRNA 10430 15402 . + . ID=g9234.t1;Parent=g9234;Name=g9234.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 10430 10624 . + . ID=g9234.t1.utr5p1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 10430 10636 . + . ID=g9234.t1.exon1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 10625 10636 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 10828 10986 . + . ID=g9234.t1.exon2;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 10828 10986 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 11189 11251 . + . ID=g9234.t1.exon3;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 11189 11251 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 11427 11612 . + . ID=g9234.t1.exon4;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 11427 11612 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 11850 12050 . + . ID=g9234.t1.exon5;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 11850 12050 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 12430 12558 . + . ID=g9234.t1.exon6;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 12430 12558 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 12655 12735 . + . ID=g9234.t1.exon7;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 12655 12735 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 12996 13128 . + . ID=g9234.t1.exon8;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 12996 13128 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 13363 13668 . + . ID=g9234.t1.exon9;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 13363 13668 . + 2 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 13835 14013 . + . ID=g9234.t1.exon10;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 13835 14013 . + 2 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 14320 14423 . + . ID=g9234.t1.exon11;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 14320 14423 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 14633 14726 . + . ID=g9234.t1.exon12;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 14633 14726 . + 1 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . exon 14932 15402 . + . ID=g9234.t1.exon13;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . CDS 14932 15162 . + 0 ID=cds.g9234.t1;Parent=g9234.t1 NODE_117_length_38182_cov_45.3675 . three_prime_UTR 15163 15402 . + . ID=g9234.t1.utr3p1;Parent=g9234.t1 #PROT g9234.t1 g9234 MGDESPPVRRGTIIKAPQGLGDSFDRLRIHRQSRGSVVSEVENVKEGFMVKKGHLRHNWKKRWFVLRGHNLFYFRQTKDTNTRGNIYLVGATVTRIRHRQKPYVFRIQTSNGVDFMFHASSESELEDWIVAVEKATHIDGNLIKPYVGPGMDGSVDSADAGGACNLDEDDECEASEISRNSFLEMAFGNDDDDITGEGDGCFDDDEEVEAMPSEATAEALPDASDDESVSGVKQTASTMPCILSGFLVKKGRRRLHNWKMRWFVLGDRSLSYFKTSLDASPLANVALVDCFVEEVQHHRQFVFAVSLPDASQLMLQAATSEELSQWIDAIGEVCRLATEDAQKQRLVGTPRTSMDAKAVVGHVEAVTPPVTLPPPVFVPDEVPAPCPPLPGHADLVEAMKDPDAGIPLSTRQYRLKTCKLSFAASEMIDWLLSWSFITARDSGVAIGRLLEHEGFISAASHKRQLFDDGPFYYRFARRESKGKQSSGEESDDDPLVQSSGSVSVYNHRLRADSDSIAGFLQKKGHMRHNWKVRWFVLGQRTLEYFANDKSTESIGVISLAGAAVIPRSDSKWQFAFSVTTGSESSRKEYMLRASSADEMDKWVTALQLRAADAIDRPLIATLSGI* # ORIGINAL: g9231.t1 original gene structure, not modified by PASA NODE_117_length_38182_cov_45.3675 AUGUSTUS gene 420 749 . + . ID=g9231;Name=g9231.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS mRNA 420 749 . + . ID=g9231.t1;Parent=g9231;Name=g9231.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 420 749 . + . ID=g9231.t1.exon1;Parent=g9231.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 420 749 . + 0 ID=cds.g9231.t1;Parent=g9231.t1 #PROT g9231.t1 g9231 MERREGEEYDFNEPLLERVLREPHVKTAGDVIVALAFLSPGRHAGRSGDIAKIIDDAEKEAANGTDVRPLRCHMTRLVGEHPLVVKILQDRYRQALEQAPVCPVTHTHI* # PASA_UPDATE: g9235.t1, single gene model update, valid-1, status:[pasa:asmbl_665,status:12],[pasa:asmbl_666,status:12], valid-1 NODE_117_length_38182_cov_45.3675 . gene 15626 18472 . + . ID=g9235;Name=g9235.t1 NODE_117_length_38182_cov_45.3675 . mRNA 15626 18472 . + . ID=g9235.t1;Parent=g9235;Name=g9235.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 15626 15679 . + . ID=g9235.t1.utr5p1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 15626 15924 . + . ID=g9235.t1.exon1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 15680 15924 . + 0 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 16090 16352 . + . ID=g9235.t1.exon2;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 16090 16352 . + 1 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 16639 17120 . + . ID=g9235.t1.exon3;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 16639 17120 . + 2 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 17399 17449 . + . ID=g9235.t1.exon4;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 17399 17449 . + 0 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 17646 17741 . + . ID=g9235.t1.exon5;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 17646 17741 . + 0 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 18045 18092 . + . ID=g9235.t1.exon6;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 18045 18092 . + 0 ID=cds.g9235.t1;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . exon 18236 18472 . + . ID=g9235.t1.exon7;Parent=g9235.t1 NODE_117_length_38182_cov_45.3675 . CDS 18236 18472 . + 0 ID=cds.g9235.t1;Parent=g9235.t1 #PROT g9235.t1 g9235 MVSRVRVSFAPEIATDIAPPGMPVWIFIDKKSCRAIADLTHSIESRFALRKKCPKGTLLLLDGALLLPAEKIDVICDDDVLHVVPRPTDSKDGTDSKAKGTSQKGGAKKAISVAAKRKRRDSTSSSSSSSSSSSSSSSSSSSSSDSESDSDSDAPSKKKRKIGEQKSVQAVAKNAKNAGGVASLTKGNDKPSGTENVAKSLQNGQKSAQKSAPPAQPPQQQQQQGQPGKKQPQQQQKAQPQQQQQQPTKKQQQQQQQQPQGGEGPQKQGKQQQQQQQQQQQQQQQQQQQQQQQQQNAKKAPQQTPQPSQQSKQQQQQQPRQTTAQGGNQQVTGPKGSNTGNTPKGMTAESAFPAQPRGKYDDLAPLNRPPAPGERIAFKILELTTSYTPEISAYKEALVISFDYGSATASVRLAPYSAQPGHGDGTDERRFDLNRQYDENGDLLPPSEEELAAAEANSLRDVALTDMIDPRIL* # PASA_UPDATE: g9236.t1, single gene model update, valid-1, status:[pasa:asmbl_667,status:3], valid-1 NODE_117_length_38182_cov_45.3675 . gene 19143 23511 . + . ID=g9236;Name=g9236.t1 NODE_117_length_38182_cov_45.3675 . mRNA 19143 23511 . + . ID=g9236.t1;Parent=g9236;Name=g9236.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 19143 19287 . + . ID=g9236.t1.utr5p1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 19143 19441 . + . ID=g9236.t1.exon1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 19288 19441 . + 0 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 19624 19823 . + . ID=g9236.t1.exon2;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 19624 19823 . + 2 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 20006 20149 . + . ID=g9236.t1.exon3;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 20006 20149 . + 0 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 20331 20398 . + . ID=g9236.t1.exon4;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 20331 20398 . + 0 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 20737 20799 . + . ID=g9236.t1.exon5;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 20737 20799 . + 1 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 20954 21031 . + . ID=g9236.t1.exon6;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 20954 21031 . + 1 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 21306 21333 . + . ID=g9236.t1.exon7;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 21306 21333 . + 1 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 21533 21600 . + . ID=g9236.t1.exon8;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 21533 21600 . + 0 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 21826 22003 . + . ID=g9236.t1.exon9;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 21826 22003 . + 1 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 22181 22230 . + . ID=g9236.t1.exon10;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 22181 22230 . + 0 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 22481 22629 . + . ID=g9236.t1.exon11;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 22481 22629 . + 1 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . exon 22992 23511 . + . ID=g9236.t1.exon12;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . CDS 22992 23323 . + 2 ID=cds.g9236.t1;Parent=g9236.t1 NODE_117_length_38182_cov_45.3675 . three_prime_UTR 23324 23511 . + . ID=g9236.t1.utr3p1;Parent=g9236.t1 #PROT g9236.t1 g9236 MGSTACLVLALLAMAACGAHARDGDATELRLPSFFSDNMVLQGQPLNARIWGWAASNASVSVTVGTKLSVTASADANGAWTAVFAAVPHGGPYDVVISTNTDKITLGNVLFGDVFLCSGQSNMQMALNSVYNATEEIADSINYPNLRLFTTKYVWQPQPTDDVTSAAPYVWGVSGPDVVNNSNVFSAVCYLYGRDLIRQNPNAIIGLVASMLGGTAVECWSSPDAIKECTSTNPAAASRMRRGGQPATQLYNGMIYPFLKMSFKGVLWYQGEQNNDEPALYRCMFPAMIKDWRRKFVDSADLPFLFVQLAPVTNAGLDFAQIREAQTEAMTLPFVGMAVTYDLGDPDSPYDSIHPRNKQEVARRLYLLARTIIYEEEDVITQGPRYLFAQRSEKPTPAGEFKVTLAFEVGSGELSLGGSEKCTACCNGDAAFDVADAKGAWAPAVSAAVIPSKSADGVVYVEVTSPASTGRPTGVRFAYSNAPQCAIYGSDHLPTPPFLTYFV* # ORIGINAL: g9237.t1 original gene structure, not modified by PASA NODE_117_length_38182_cov_45.3675 AUGUSTUS gene 24000 29497 . - . ID=g9237;Name=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS mRNA 24000 29497 . - . ID=g9237.t1;Parent=g9237;Name=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 27700 29497 . - . ID=g9237.t1.exon1;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 27700 29497 . - 0 ID=cds.g9237.t1;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 26925 27111 . - . ID=g9237.t1.exon2;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 26925 27111 . - 2 ID=cds.g9237.t1;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 25720 26729 . - . ID=g9237.t1.exon3;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 25720 26729 . - 1 ID=cds.g9237.t1;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 24000 25378 . - . ID=g9237.t1.exon4;Parent=g9237.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 24000 25378 . - 2 ID=cds.g9237.t1;Parent=g9237.t1 #PROT g9237.t1 g9237 MLNSRRGRLVGASAASKPTIQPTQPASTQAVATPARDAPLKKRGKNFGDDDERGRKAPIYHRERPLDDWQCDLIDHYASAYGAHVERGAIETVLVSCEFSVDAAEVLLADIFGPLSIGSEDEVDGLCELDGQGLVITSSTKNADVPDDDGVIAQPHPHFMHMKSVDSNLEDIGRDAERYHAYSHVSQHTVADRVSIVRSSEAPSMHTSDHTCPLSGVNIIASASPPVNGVSSAGVDAAVGGSVGHKHSHGTVYDPVTSAAPSDSATHTYTPISPPVTASHVFTAPVTSTRTLFASTTDPSTRVTELNDTIDGASAICTPNVSVVSASLPVTTSTSDSAQSSEYPKPNVFVYMTSSSVSPPSSSLCADKDNTCVQTLPTTPTRVYARPPNRNRAPTQQVSQSEESTPAPICVNPVLTSPIRHAQDVAADIRTVNALLAESVGDSPAHTSSRATGRGEVAHVGTAHNTRRALFGDNNNRETDRNERENDALRSYVRQGPTRAVPVVAPPPSYHVTRHRPEPRTHSMTAGSASHERHSYSHGRSGDVDVMGFQRRRGAYGAHSMAAGSHSARHPAHANRRIAGVGTWTGGQYRGWYCDFVSKAAWKGQQLPAGVAFNPIIMNLLQQLASSAPMAASASVNGAHSTSSLDVAPHRSHASTPVPEIIGDAAYLADGPTGYTEANSTAADRRLSASDAANAQDDDEVLLYFCDDSTPFGRVGPDADLQDASGDDDSNYAMSVPHLDEGEYMAAAATRGRGSVRGRGRGVRDRGRGRGRGMRGGSRGAYAGGGSSAYDGRNGSGSGSGSVGSLRGAHIPRRHAPTANIPGSGGNPRVISAEEHRLMSDHVRNSGDRQTDRMDDRHAPAPPLPSLWAGGAVAAASASRIEEMVAGPTSVIDTAHWPSLAPELPQNDITPQGVATFSSILEFLVNAFPKVDMALVAAVLSENDNDFDAAMETLVAIDVSDSDAIDASAVVWDTTAATDSDGHSYTYGLTMVDLHAKELFTACDESALKDVGLDDTEANVIAIRALCEMFPSEDPITLASALGDASGDLDAATAIMLSAIDASSGESNAAHRADKDVHELQPFDDDLRLAKAIAKDDEVSIGKSEKEAFEVAQLCEMFPGVRAGKVWTVLRKAGSLDAAIDSLARPASEGGSVRGKFRPYSVSSQQQQGRGLTHAQPSVGRGVGEGDGMTIAGKIKFSRLCDLFPQAPAELVRGVFEACGSSMDTAFQLLADDYGVPKGVSMMSGPSSATAPGNVSVSHSPELRRAGSQTSGQQTVTPNVERPTHASESARHDRLREEYVAKAATAFRAGQHSVAGHYSEMARKHAQIARTERTLAGPMLSLRSSKAAVAVSTGGLAQGHGAAFISAEDAATLEFLDLHGLVVAEAISALSFVLDAKRATRRGMRQRASVFQVVTGRGNNSANGRAKVRPAVISFLRQNRYDFDEATNPGAVFVNVG* # ORIGINAL: g9232.t1 original gene structure, not modified by PASA NODE_117_length_38182_cov_45.3675 AUGUSTUS gene 1282 4326 . + . ID=g9232;Name=g9232.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS mRNA 1282 4326 . + . ID=g9232.t1;Parent=g9232;Name=g9232.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS exon 1282 4326 . + . ID=g9232.t1.exon1;Parent=g9232.t1 NODE_117_length_38182_cov_45.3675 AUGUSTUS CDS 1282 4326 . + 0 ID=cds.g9232.t1;Parent=g9232.t1 #PROT g9232.t1 g9232 MWLVDVFGGRKNCIERTERAVRFTAFGVLAFWLSVSTDSSLLPGLTSLPLRFLSGFVFCCMSALTPPMVASVTLICSVAYVGMMIGLALVTALLYIVQHSIALVYVLLLLLAAWLCTLRTGRTAAITNVAVMLTLYIIMLAFFEVYPYMVDGVYLNVPMSQIRALLNQTEPQIIAEIDKVQNMLGLPVMVFINDHRAGIEGAIVNGTQWTIDWRIEFPYGTAPAFVEPIIGEVLHASLSSAGLTVGIDGGNWLINVMWTGDGKFSIMEACLINFSIGISVFALSLICPPQRRVSTLVTRKLLGDACAVIRKVLGGESGGGNGGSEGDGGNGDGVEAGHVHPAVPSVTIFRLCQQLTGATKFVFMASLEPYLLYPGPAASPMRPLEGVRMGLTHAMWAVKHEIYDRDGDDGGVGDDAIAQADAKKAVKERKAWIWSVAGELETLLRLEPSLLYRKRYIEARDKSIAAMQELVKSVPAASTCDPIVHALLETCKCVDSLYDGLHNQSLRGLLGCLVVCHLPALAMIGRLITSLVSFFVSPFKPKLWVGRDALWRDAEVQWLFKMLFGWALIVALPLWSSEYRSWSLGVSNTDVSSASQLVEEASTTKITSWVALGFLTTFHTTYEGCVHRVSFRAAGTLIGAFSAWIILQIVSGPDHPALVLLWCLVVIFIDVWLCAHPQAPLTGFHPELNYAAQVLMYTQMYITLSDITGDSSGDYLVASRILGNFFGMGIGLVLAYTFPVISADDHVRILLSYAFEETVALLDDADAPSDASAGETAHAMKIARITDYQSRAARLYEEGSRRRYTLFGKIDYRLEALSTLIDEFVHVVTSFVTRTDKSPTAVAALIPLSPEVRELFTATQTVIACRSSSLLKRSRNGGSCFDRSPAGTTTFQEASRQWLSAFESASLARHTHTHSQEPSAPPSLFPVRPLVRIALAIHTELSTVGVYEGETAFQLAASVHLDHSARQSTTLQDLGASKSASPDSVALASASLVALASASASTSAAVVAPADDQI* # PASA_UPDATE: g9239.t1, single gene model update, valid-1, status:[pasa:asmbl_669,status:3], valid-1 NODE_117_length_38182_cov_45.3675 . gene 34394 36252 . - . ID=g9239;Name=g9239.t1 NODE_117_length_38182_cov_45.3675 . mRNA 34394 36252 . - . ID=g9239.t1;Parent=g9239;Name=g9239.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 36194 36252 . - . ID=g9239.t1.utr5p1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 36093 36252 . - . ID=g9239.t1.exon1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 36093 36193 . - 0 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 35838 35913 . - . ID=g9239.t1.exon2;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 35838 35913 . - 1 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 35575 35707 . - . ID=g9239.t1.exon3;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 35575 35707 . - 0 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 35025 35225 . - . ID=g9239.t1.exon4;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 35025 35225 . - 2 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 34627 34787 . - . ID=g9239.t1.exon5;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 34627 34787 . - 2 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . exon 34394 34458 . - . ID=g9239.t1.exon6;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . CDS 34453 34458 . - 0 ID=cds.g9239.t1;Parent=g9239.t1 NODE_117_length_38182_cov_45.3675 . three_prime_UTR 34394 34452 . - . ID=g9239.t1.utr3p1;Parent=g9239.t1 #PROT g9239.t1 g9239 MSRDHMLYTQGALQATVLEASDWPKPWDEGALCSGVGILFEGYVHGKKRHTITDSTGAKHRYIILHIEYKTAYKRQYDASGKEIEVGVGSTKKVSTGYLNSSYDNVKGKDDLISADQVHQLIGKSLAKISKATARGNMFEFWGTEEALNKIDLSTRDPVKLKTKGDSPFIELLVRLDAHSSLLTNFSGDKPVGSSWTDKIMGNKSDEPAAQGSKAGEGAADDEWD* # PASA_UPDATE: g9240.t1, single gene model update, valid-1, status:[pasa:asmbl_670,status:12], valid-1 NODE_117_length_38182_cov_45.3675 . gene 36883 37948 . + . ID=g9240;Name=g9240.t1 NODE_117_length_38182_cov_45.3675 . mRNA 36883 37948 . + . ID=g9240.t1;Parent=g9240;Name=g9240.t1 NODE_117_length_38182_cov_45.3675 . five_prime_UTR 36883 37036 . + . ID=g9240.t1.utr5p1;Parent=g9240.t1 NODE_117_length_38182_cov_45.3675 . exon 36883 37948 . + . ID=g9240.t1.exon1;Parent=g9240.t1 NODE_117_length_38182_cov_45.3675 . CDS 37037 37948 . + 0 ID=cds.g9240.t1;Parent=g9240.t1;3_prime_partial=true #PROT g9240.t1 g9240 MAPTNSPFISVAIAVFLVVGHAAVEIEAKLNKPANENRNSNESLVQYIASVWGSIRVPLFTAIAVAIAIAWRRKTNRVKKQSAAAIERLRTQVAPTVPASPKAFVGAAPAARAKSVMVFDPIREDAAREETVESEGLDYTQRREEAKERKMAAAAAAAAAASTSVNDVDADKKAKKAKKIPKSSAEECSKGADCCKVESTTSTAQEECCKSSPSESADACCNDNEGDACCGGSAKSAKSNPPGKEADKTVEAAHTTRVRVMFGTQTGNAKRMALDFAHTLKSSSEIDAEIVDLKEYDPEDLLDE # PASA_UPDATE: g5156.t1, single gene model update, valid-1, status:[pasa:asmbl_5942,status:12], valid-1 NODE_3366_length_3612_cov_77.6562 . gene 498 3407 . - . ID=g5156;Name=g5156.t1 NODE_3366_length_3612_cov_77.6562 . mRNA 498 3407 . - . ID=g5156.t1;Parent=g5156;Name=g5156.t1 NODE_3366_length_3612_cov_77.6562 . five_prime_UTR 3257 3407 . - . ID=g5156.t1.utr5p1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . exon 2462 3407 . - . ID=g5156.t1.exon1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . CDS 2462 3256 . - 0 ID=cds.g5156.t1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . exon 2108 2273 . - . ID=g5156.t1.exon2;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . CDS 2108 2273 . - 0 ID=cds.g5156.t1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . exon 1590 1786 . - . ID=g5156.t1.exon3;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . CDS 1590 1786 . - 2 ID=cds.g5156.t1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . exon 498 1383 . - . ID=g5156.t1.exon4;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . CDS 655 1383 . - 0 ID=cds.g5156.t1;Parent=g5156.t1 NODE_3366_length_3612_cov_77.6562 . three_prime_UTR 498 654 . - . ID=g5156.t1.utr3p1;Parent=g5156.t1 #PROT g5156.t1 g5156 MERHGDVLQQQPQPGQYPRFLAERQQQQQHIAQTHFHAMPPEPAQRSPKKEQSSLAMHTHGHPLGLSRLGLGTSGGGGGGASDAGSVIDEDAPPEFSFEMETERIMHWHERTWNGHQRNLVLSEVLRHLDPPQLYFIAAALTTRMYRDFVGRLPRHIGIRILKYLDVTDICRCSIVSRDWYGVCNDDELWRYKCEGRKDLPQGPLRSIDSNAHWKDVYHGRLHLRRNWSKARCDVVVCEGHEHRVLCVAFNGTHVVSGSVDKTIRVWSIATGESVMTLHGHRRGVWALTFLNRNIVISASFDCTIRLWNIRTGECEKILQGHNGPIWCMERSRNGLVVSGSGDKTVKVWDTHTSICKRTMYGHTSPVYSIDIDNSTNIVVSGAGDKTVRVWSMDTGVCFRVLPPQTHAIMCLSVDKMILAMGCWDLVKVWDLETGECLRTLKGHLGRVDAVSIRVSQRPTLTPQIREQIASMQSLQTAMEKPEKPDKTEREEKSPDGKSDKSSKVAGADKTAEKGKLDPKMEKEKLEKEKTEKEKTEKMDKATQAALFRKQAKDHQQLMGTLMGQLQAVLLSGARDRLVKEWNVHSSKCVSSLKGHKGAINAVRFDESLIVSGSDDGTVRVWNFDTAV* # PASA_UPDATE: g6434.t1, single gene model update, valid-1, status:[pasa:asmbl_4148,status:3], valid-1 NODE_2367_length_6544_cov_88.3146 . gene 2860 6281 . - . ID=g6434;Name=g6434.t1 NODE_2367_length_6544_cov_88.3146 . mRNA 2860 6281 . - . ID=g6434.t1;Parent=g6434;Name=g6434.t1 NODE_2367_length_6544_cov_88.3146 . five_prime_UTR 6058 6281 . - . ID=g6434.t1.utr5p1;Parent=g6434.t1 NODE_2367_length_6544_cov_88.3146 . exon 5720 6281 . - . ID=g6434.t1.exon1;Parent=g6434.t1 NODE_2367_length_6544_cov_88.3146 . CDS 5720 6057 . - 0 ID=cds.g6434.t1;Parent=g6434.t1 NODE_2367_length_6544_cov_88.3146 . exon 2860 5335 . - . ID=g6434.t1.exon2;Parent=g6434.t1 NODE_2367_length_6544_cov_88.3146 . CDS 3223 5335 . - 1 ID=cds.g6434.t1;Parent=g6434.t1 NODE_2367_length_6544_cov_88.3146 . three_prime_UTR 2860 3222 . - . ID=g6434.t1.utr3p1;Parent=g6434.t1 #PROT g6434.t1 g6434 MAQSPESLSTRGSNGVVRRRLVILTLLGFVGLTATLSVVWKRLPVYSANPDRAIVALPDSLTDGRLPAQWSDLPPPVVMSAGGLTMLASGNIEHAAGQYPEHSTTTGHPAAGSGSSSSAPSASPGSPATSTASPIDSVLMLHWTPWCSQYSSGPFGPMQTTRKCPISMPQSGVPNPPSSAETFTCSATVDRARLREASLVLFHVPEVTTFKPEDYPSERYPHQQWLCYSMESPSKIRPQLSTASFMSMFNASSTYRVDSDFPIPYGPPSAEAILNAPFVPLSERNSDVPVAFIASNCDSPNGRTAYVAELMRHIGVASYGKCLNNRPGGISARNQIDRADTDRKVGHHKFMLVFENGHCGHYITEKLANALIAGVVPVVWGPEDHSDYERWAPAEGAFIFAGDFASPRNLAAYLNMLNRNDALLLPFLRYRLASKILNPAFGAHTYLLNDFCGMCNAARRAAAQLPASITGRTTPPPDLTCNTTETAMNDKLRPARMGIETVPLTPFALCFNTSYSYVSVDRSDTAIARAVFWTAPRGAPLAMYFAGGVVATANNSQLIANTVLREGFALQSSPQSKRIWLSTPLNWAEEDPSDGQWVVALQSFRHLQPLLHAFALSPDETTPRYLPVVRHALFDWYNFHVRRAILGKSEHVWQPSVAGIRAFYLAFVIDTMRRRSIHLAYVVTQEMIDLLDLARACIEALRRILHDGVAVSIASLPALLGVAALARALPEIVGSDNDYQRASKGFRDVVEAYCGTDSVPRLGDDPHLQLTELEAVYATNVFTGDEEVTALMTRMRGKIGSIATLPPPALQTQPPS* # ORIGINAL: g6433.t1 original gene structure, not modified by PASA NODE_2367_length_6544_cov_88.3146 AUGUSTUS gene 20 2379 . - . ID=g6433;Name=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS mRNA 20 2379 . - . ID=g6433.t1;Parent=g6433;Name=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 2343 2379 . - . ID=g6433.t1.exon1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 2343 2379 . - 0 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 2164 2226 . - . ID=g6433.t1.exon2;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 2164 2226 . - 2 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 1959 2060 . - . ID=g6433.t1.exon3;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 1959 2060 . - 2 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 1672 1762 . - . ID=g6433.t1.exon4;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 1672 1762 . - 2 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 1264 1358 . - . ID=g6433.t1.exon5;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 1264 1358 . - 1 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 1048 1140 . - . ID=g6433.t1.exon6;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 1048 1140 . - 2 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 604 721 . - . ID=g6433.t1.exon7;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 604 721 . - 2 ID=cds.g6433.t1;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS exon 20 161 . - . ID=g6433.t1.exon8;Parent=g6433.t1 NODE_2367_length_6544_cov_88.3146 AUGUSTUS CDS 20 161 . - 1 ID=cds.g6433.t1;Parent=g6433.t1 #PROT g6433.t1 g6433 MLVVIPEWISHNGQAIFSVDVHPDGTKIATGGQDCKVKVWNMAPLQSEAAERNAEVPKMLSVMASHIGAVNCVRWAPAGRLLASGSDDKLIMIWQLAQTGVTSTPFGSDPGEVITEHWRCTSTLRAHDGDVCDLAWSADGSRLASGSIDNLVIVWDGKTFAPVVRLHGHSGFVKGVTWDPAGQFLASQVVWHIVLCVYVIWSPDGAMISTAHAYNENESSPVSAVVERDTWETACEFVGHAGPIIAT # ORIGINAL: g13422.t1 original gene structure, not modified by PASA NODE_1240_length_12819_cov_40.4336 AUGUSTUS gene 5160 12545 . - . ID=g13422;Name=g13422.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS mRNA 5160 12545 . - . ID=g13422.t1;Parent=g13422;Name=g13422.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 10155 12545 . - . ID=g13422.t1.exon1;Parent=g13422.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 10155 12545 . - 0 ID=cds.g13422.t1;Parent=g13422.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 5160 9995 . - . ID=g13422.t1.exon2;Parent=g13422.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 5160 9995 . - 0 ID=cds.g13422.t1;Parent=g13422.t1 #PROT g13422.t1 g13422 MGDAVITAASILAKFHLIFDNNADAIRLLAEPLRRAGTCLSLLIARAAEIIHVVSSASPRPAARLVEECLDVFFVRRETVVYPVRRDASLMRVAWETNGPLRTHTARVCAQHPLVAPDSDMDGALSASWESNALARLAGAAGACFAANNPGRTSRDAQRGSGDDPMDTDGPHSGAWSAGQRQDTDFAGDGHTSESAGSSLASAISGHDAPLLSVVRFLVRAQDALRAAGLVSPDSIDDVLLSEFVLLPNQGQLVPPHILFEATAGLACSSFKLQNDPEILLTAIHHATSGHTFDQQSDAVRRTSSQLLCIAIDSLPTGADSPLEMTSMLDEVLKQMGASSIPNTAASGISRRVVRAAEDAPEYPPEARMIVAECVMRATVADEICRWKIEAPNVPGEGGSAVLRRSDLLSSFLSDESLLVRSRAAILIGNLYAMSAMVKPLLRPVALAVYDKAIERTRARVQFHMRSQREGDAERNRSRQAQAALLVSDALHFATAVLNLVPRSRDALYRMLRGASTVSGHSFGTISEIVKVTASLLGYENAKDLVVDSAPYVLSKWVQESLSVRQIPASLIGMTLDAFLAEFETELTAQTVLTGNTTLIAKLAADMSGARQDTLVRSSMLKVLAYYYPLRLSSPARATDVLDCMARAVGASEIDRFAKDNIGRIVSEMVLLVDDSGVSRLGPDHWGPEANPPVYSSSVMNATFAELGNAQPTDRNLLGKLVTPRSQMSLLLGLSLRISKCRRDSDALRFLRAFIYMTLGIGATLESPAILRECIQCGVRNLSRSLLREECCRLLRKVCEYAVASCPETLAAHLPLIISAVVRAIDDSCKGGVDSKRVVDAAKRVLLTVIVEPSDSLPVAGSYMGCLSQLDPLPEGNVAYDDVRKRALEIRRKMTVVDELQHFLDSGPTLASAFRVPGLEHLRVVLRLRKKELLSTLRTEVSTNMSPFGLRDLLVQVIGTLSHLCSESHPTEVRALAARCLGELGPADLQAVAFADSSGERRDLLDGCDQSFRIDTDKLLVERNVNLLEHLNVHMSDADVSCIDSAAACLRAVLKTVQGQTAFKSAVILKEYLQLFTAPSANDEKVRGKTQAASRANGAVSLSFAAIENAGLWEVGSLSHAEWLTQLTSALMETSVGDEFLRELLPLCKIKVSFCEHVFPHVIHSILADDENGSCRITLSKHVNRFLASADARRVTCSVRTVINTILFLRTQPRRVGAGGTSSIAWPNNFWLDLDFRIVAEAAESSHSYFTSIMFLEIWHLWHQEQSDINDSKRRRISRRSSSLLDYSVVSREFTGASEMSASFTPSQKPVVQPDIGPVLNRLLLGAYSRINEPDGLHGVDRGADPVSLLRTYEHAGNWVRAMETNALMLSHGALDNPSGLLDSMRYSGYSHLHEMYLRACGSLGAGVQGLGNLEERRYEAAWRCMQWDAVLPGDVESVPRLQDGFLSKVRTFDHLEVGPTEASGGRFHKSVYGLLASLGHRDETDAGVRVDAMVGQLALEVGTVGLESVRSVYSLLVRLQSAVELEDAVEIHRMAKSMSQGGNSEALHDGLDELEARWQNRYAMIGDNFECVEPILSLRASVLRVLASGRGDEHFRMRGMLVANLGQLARAARKSGRHLVTLDAVSHLRQMANRRLIPATADWAIEEAKSLWALGEVDAAYKLVRDLHMQMFAVGNAPGGPSAALQVRTLTACAKWAAELRRDFPTFIMDEFLTPAIQCSVNADPDAAGRAYYAMGRFADGMYQSLTDGMRSSSAATEKNIQKSVAQELERYRSMSKTAGVDVKEVQRHIQQLEKFVKSDKEQRDRCESERKDYLMTAINNYVACLARTDKHDARIFRLCGLWLEWFDAHPTVNDAMKKCASAVPSHKFIPLMYQLGARMSWNKRQDKTDRFQSILYTLIRRAAIDHPHHTLPVVMALKNALKGVVVKNKSVAATEDRAAAAADIVTAVAVTLPMLVCQMESLCSAYIEAADLPVPKTPPGVPAPPVINFDRGAQILKVIDLDKVSVLTADVPVSRSGDYRDIVTVKGFRRTYSVAGGVNVPKIVECVGSDGRTYKQLVKGKDDMRQDAVMQQVFRMVNTLLDRSEPSRARRLRIRTYKVIPMSQLSGVLEFVSNTIPVGAFLSSGVKEVSLVGAHARYRPCDWDLSKCRATLKEGQEKGNASDAFSQIMDNFHPVFRHFFFERFPDPAEWFERRLAYTRSAATSSIVGYGLGLGDRHLQNILIDCRTAELVHIDLGVAFEQGKALMTPEVVPFRLTPDIVDGMGIAGVEGTFRRCCERTLEVLRANHDALVTIIEVYLHDPLYKWNLTVTRAARMQLDGGNAPGAVEFADHNDNDEFAEGDDNAGGAPEGARSKLTDRVLVRLRQKLQGYEEGAQTTVSGQVNIVIQQARDPNNLARMYVGWQPWL* # ORIGINAL: g13421.t1 original gene structure, not modified by PASA NODE_1240_length_12819_cov_40.4336 AUGUSTUS gene 162 4841 . + . ID=g13421;Name=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS mRNA 162 4841 . + . ID=g13421.t1;Parent=g13421;Name=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 162 334 . + . ID=g13421.t1.exon1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 162 334 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 675 768 . + . ID=g13421.t1.exon2;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 675 768 . + 1 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 975 1109 . + . ID=g13421.t1.exon3;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 975 1109 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 1407 1608 . + . ID=g13421.t1.exon4;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 1407 1608 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 1807 1955 . + . ID=g13421.t1.exon5;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 1807 1955 . + 2 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 2098 2196 . + . ID=g13421.t1.exon6;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 2098 2196 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 2365 2431 . + . ID=g13421.t1.exon7;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 2365 2431 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 2634 3249 . + . ID=g13421.t1.exon8;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 2634 3249 . + 2 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 3405 3490 . + . ID=g13421.t1.exon9;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 3405 3490 . + 1 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 3668 3776 . + . ID=g13421.t1.exon10;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 3668 3776 . + 2 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 3916 4078 . + . ID=g13421.t1.exon11;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 3916 4078 . + 1 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 4272 4433 . + . ID=g13421.t1.exon12;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 4272 4433 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS exon 4563 4841 . + . ID=g13421.t1.exon13;Parent=g13421.t1 NODE_1240_length_12819_cov_40.4336 AUGUSTUS CDS 4563 4841 . + 0 ID=cds.g13421.t1;Parent=g13421.t1 #PROT g13421.t1 g13421 REDMDIVCERFTTSKLQSFEDLNSIATYGFRGEALASITHVAHLSIVTKTANSPCAYRAVYADGKLVPPKPGMTADPKPCAGNRGTQITVEDLFYNVATRRKALKSASEEHAKIADVVSKYAIHNSHCAFSVKKHGETTADVRTLPNTTPLENIKTIYGATIARELLKVDFETSAYQCKGRGLVSNANYAVKKGTYIFFVNHRLVDLPSIKKAIETVYAAYLPKSMHPFVYLSLEMAPQNVDVNVHPTKKEVHFLNEEKIVEIVQKAIEERLLGSNESRTYYTQTLLPGAFVPVDDVVSKAPARTTGEERDYDHLMVRTDAKLQTLHAFLQPVAKQSDASSAVRTVRATDDHDDADDGGGVEDDSDGEMADETRRHARGKAPARTKAERGSLIDTDNRRASRDDKDDRDDVEDNAGEAGDFREEERSPKSTRKERSLVAAHDVVDDDASNDDGADFGDGDGRSLPTIDAVDKENQPPAHRQQSRGTASPRKRKHDEAEEVDGEEGTTTESERKRPTRSRVPVQLTSIVRLREKIERNSASALRSMFQEITFVGCVNPTLALVQHSTRLFLVNITNISKEMFYQIAVVDFQNFGTIKILEAPSIVELLSIALESPHSGHNAETDGSISEVAQHYAGVLTAKAEMLEEYYSLSINDEGRLRTLPLLMDGHLPDFDRLPQFLLKLAAQVDWTSEQGCFDSMAREIASFYAMRSAYSAADESSAVADKDAPASGRDWRWTVEHVVFPTCRARLLPPQRFTTDGTLLQIASLPDLYKVFERC* # PASA_UPDATE: g3252.t1, single gene model update, valid-1, status:[pasa:asmbl_9111,status:12], valid-1 NODE_7349_length_446_cov_44.7898 . gene 2 446 . + . ID=g3252;Name=g3252.t1 NODE_7349_length_446_cov_44.7898 . mRNA 2 446 . + . ID=g3252.t1;Parent=g3252;Name=g3252.t1 NODE_7349_length_446_cov_44.7898 . five_prime_UTR 2 2 . + . ID=g3252.t1.utr5p1;Parent=g3252.t1 NODE_7349_length_446_cov_44.7898 . exon 2 446 . + . ID=g3252.t1.exon1;Parent=g3252.t1 NODE_7349_length_446_cov_44.7898 . CDS 3 446 . + 0 ID=cds.g3252.t1;Parent=g3252.t1;5_prime_partial=true;3_prime_partial=true #PROT g3252.t1 g3252 NLGVCSGCVNNTENGVGNKCDVCKEDHKRFNKASYTNIDTPATQEQMRYEKCITCTCNTHEDVSPSSSICDEFTGVCYACKDNTKNGDDGECEKCLPDYFRGLDGTYVPGDDVCRVCDLADGTGCAVHQVIDACLSCDDQCYGDNNKC # ORIGINAL: g2974.t1 original gene structure, not modified by PASA NODE_7427_length_439_cov_50.772_potentialcontaminant AUGUSTUS gene 2 190 . + . ID=g2974;Name=g2974.t1 NODE_7427_length_439_cov_50.772_potentialcontaminant AUGUSTUS mRNA 2 190 . + . ID=g2974.t1;Parent=g2974;Name=g2974.t1 NODE_7427_length_439_cov_50.772_potentialcontaminant AUGUSTUS exon 2 190 . + . ID=g2974.t1.exon1;Parent=g2974.t1 NODE_7427_length_439_cov_50.772_potentialcontaminant AUGUSTUS CDS 2 190 . + 0 ID=cds.g2974.t1;Parent=g2974.t1 #PROT g2974.t1 g2974 TASQDGRGCRRWGRDGGSDPCGLIEVLGEVLEGASVPHGVAGWQGGKNCARSSECSVFLRHT* # PASA_UPDATE: g8915.t1, single gene model update, valid-1, status:[pasa:asmbl_6466,status:12], valid-1 NODE_3736_length_2866_cov_30.6564 . gene 53 2762 . - . ID=g8915;Name=g8915.t1 NODE_3736_length_2866_cov_30.6564 . mRNA 53 2762 . - . ID=g8915.t1;Parent=g8915;Name=g8915.t1 NODE_3736_length_2866_cov_30.6564 . five_prime_UTR 2743 2762 . - . ID=g8915.t1.utr5p1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 2604 2762 . - . ID=g8915.t1.exon1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 2604 2742 . - 0 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 2304 2406 . - . ID=g8915.t1.exon2;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 2304 2406 . - 2 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 1912 2065 . - . ID=g8915.t1.exon3;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 1912 2065 . - 1 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 1301 1727 . - . ID=g8915.t1.exon4;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 1301 1727 . - 0 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 665 1051 . - . ID=g8915.t1.exon5;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 665 1051 . - 2 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 347 432 . - . ID=g8915.t1.exon6;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 347 432 . - 2 ID=cds.g8915.t1;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . exon 53 229 . - . ID=g8915.t1.exon7;Parent=g8915.t1 NODE_3736_length_2866_cov_30.6564 . CDS 53 229 . - 0 ID=cds.g8915.t1;Parent=g8915.t1;3_prime_partial=true #PROT g8915.t1 g8915 MRRFEDTGKFKKTAQANEAPAPSKIAPATPEVAKESEMKKEATKDDETTEAPIAEGLSIEEKLKKLGVGGRKKGQTPSGPSSSKAKTEAAKAISPKAKPKVARRWEPAGDTVELDFSGTQKGSEQSDALAGKAASLLYEGTAVAVPAGDVNEMEFNPDADPADNDDHDGDDDNDDDDDDASDDDDTGAKASLRKTRMLRPGEGQQPQKPAQRSGIMSFFRGLAGGETISAESLAAVLDKTKEHLISKNVAADIAQKLCDSVASNLVGKTQPSFRGLASIVRETLEESLVRILSPNRRIDILRDVLSNQQTPGSRPYVVVMCGVNGVGKSTNLAKISNWLLGNGLKVVIAACDTFRSGAVEQLRVHARALSDLHPGQDGNPRVLLYEKGYGKDAAAIASDGIGFARENRADVVLVDTAGRMQDNEPLMRALAKLIKMNTPDLILFVGEALVGNEAVDQLVKFNRALADFSETAQPRLIDGVILTKFDTIDDK # ORIGINAL: g9664.t1 original gene structure, not modified by PASA NODE_464_length_23238_cov_43.3916 AUGUSTUS gene 17883 18497 . - . ID=g9664;Name=g9664.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS mRNA 17883 18497 . - . ID=g9664.t1;Parent=g9664;Name=g9664.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 17883 18497 . - . ID=g9664.t1.exon1;Parent=g9664.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 17883 18497 . - 0 ID=cds.g9664.t1;Parent=g9664.t1 #PROT g9664.t1 g9664 MCVGAHNLKQWWLEQLPWRRSQARAYLNGFSWVAIIHGKASVCRIWLREAGVGVNVAKPAVAAVAGTQQKRLAPQHAFCKCRSCHRTHQPGCCPRGPLNLKKEAAGIAKEHGLTSGIDRIAKNRALSENEIREILRIGSICMAERRLAQGGGVYVPKVSFNSFMSDTPLARAARCAGVSETTIRRLLAEASAGGGLALPQTREL* # PASA_UPDATE: g9666.t1, single gene model update, valid-1, status:[pasa:asmbl_7500,status:12], valid-1 NODE_464_length_23238_cov_43.3916 . gene 20624 22295 . - . ID=g9666;Name=g9666.t1 NODE_464_length_23238_cov_43.3916 . mRNA 20624 22295 . - . ID=g9666.t1;Parent=g9666;Name=g9666.t1 NODE_464_length_23238_cov_43.3916 . five_prime_UTR 22202 22295 . - . ID=g9666.t1.utr5p1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . exon 21855 22295 . - . ID=g9666.t1.exon1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . CDS 21855 22201 . - 0 ID=cds.g9666.t1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . exon 21558 21710 . - . ID=g9666.t1.exon2;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . CDS 21558 21710 . - 1 ID=cds.g9666.t1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . exon 21247 21424 . - . ID=g9666.t1.exon3;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . CDS 21247 21424 . - 1 ID=cds.g9666.t1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . exon 20624 21109 . - . ID=g9666.t1.exon4;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . CDS 20891 21109 . - 0 ID=cds.g9666.t1;Parent=g9666.t1 NODE_464_length_23238_cov_43.3916 . three_prime_UTR 20624 20890 . - . ID=g9666.t1.utr3p1;Parent=g9666.t1 #PROT g9666.t1 g9666 MLTSATQYTPSTQSEATRALGSVEDVPLPARRAFDLTHLCPPYFRPLRIPRPGEWLHAHSERAQTVKSWAQSIRNHVDHGRRAIIYLLPLDADASLLGRSNCASPDTSVICDYVKKFYQMDARVLPAVRIKSGSVQSRTNEYTGKPQVLIGDLLDVLKARRPKDAYCVLGITMADLYPSDEWNFVFGQASTVDGCGVFSFARYDSLFYGEERGDAYENVVLKRSCKVCVHEIGHMFNLRHCVFFDCAMGGSNSLEESERRSCHLCPIDLRKLQLAIGQSKFDVMKRSVHILGRFCVCC* # ORIGINAL: g9658.t1 original gene structure, not modified by PASA NODE_464_length_23238_cov_43.3916 AUGUSTUS gene 1140 3103 . + . ID=g9658;Name=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS mRNA 1140 3103 . + . ID=g9658.t1;Parent=g9658;Name=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 1140 1194 . + . ID=g9658.t1.exon1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 1140 1194 . + 0 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 1331 1380 . + . ID=g9658.t1.exon2;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 1331 1380 . + 2 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 1538 1710 . + . ID=g9658.t1.exon3;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 1538 1710 . + 0 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 2047 2101 . + . ID=g9658.t1.exon4;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 2047 2101 . + 1 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 2201 2288 . + . ID=g9658.t1.exon5;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 2201 2288 . + 0 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 2607 2728 . + . ID=g9658.t1.exon6;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 2607 2728 . + 2 ID=cds.g9658.t1;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 3014 3103 . + . ID=g9658.t1.exon7;Parent=g9658.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 3014 3103 . + 0 ID=cds.g9658.t1;Parent=g9658.t1 #PROT g9658.t1 g9658 MAEAEIFCNGGVPPEPTKSPVAKPLKRKASDLDDATEADPPSKKHAAETPGSSTAQQVDSTVTIVYTDGACPNNGKLTARAGVGVYWAPYDPYNLSERLEGKQTNQRAEVTAGIRALELAKKRGVTGKLEVRTDSKYLINAVTSWMHKWKKSDWTIKVENKDLFVRLDELVGYKGAHNVIWTYVAGHSGDPGNDAADALAVAGAHKEIKQ* # ORIGINAL: g9663.t1 original gene structure, not modified by PASA NODE_464_length_23238_cov_43.3916 AUGUSTUS gene 13752 17466 . + . ID=g9663;Name=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS mRNA 13752 17466 . + . ID=g9663.t1;Parent=g9663;Name=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 13752 13784 . + . ID=g9663.t1.exon1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 13752 13784 . + 0 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 13902 13962 . + . ID=g9663.t1.exon2;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 13902 13962 . + 0 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 14123 14226 . + . ID=g9663.t1.exon3;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 14123 14226 . + 2 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 14406 14477 . + . ID=g9663.t1.exon4;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 14406 14477 . + 0 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 14592 14708 . + . ID=g9663.t1.exon5;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 14592 14708 . + 0 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 14888 14987 . + . ID=g9663.t1.exon6;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 14888 14987 . + 0 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 15161 15359 . + . ID=g9663.t1.exon7;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 15161 15359 . + 2 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 15545 15652 . + . ID=g9663.t1.exon8;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 15545 15652 . + 1 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 15798 16310 . + . ID=g9663.t1.exon9;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 15798 16310 . + 1 ID=cds.g9663.t1;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 16671 17466 . + . ID=g9663.t1.exon10;Parent=g9663.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 16671 17466 . + 1 ID=cds.g9663.t1;Parent=g9663.t1 #PROT g9663.t1 g9663 MAGKKGERQFQIEVSNQDQWNDMLASNKGLTVVDVYPAWSGPCAAIVSTFRRLMIDYGSDVLHFAKAVSDKIPSLEKYSGKSEPTFLFYAGGVLVSSVRGCNSPVLQKTIAQLIEIEKKIADGSAERVPYVDNEVDAANAAALKEEEAISRANAIAVSQTESEVQYTLAIVKPDASDKVDDIIAMIEESGLQVVQRADHIELSKDRALEFYKEHEGKDFYTGLTDFMSSGPITAIIISGDHAIFKFRKIIGPTNSQAAKESAPDSIRAKFGTDGRRNAVHGSDSPDSARREIHFFFPEFDPTASSEKHDAGEGAHHEDPHATHEAAPPTHTDGHAPAAHGTPAAPHADAAAPKASSSRPPSRPASVPASVQYTFAMIKPDAAEAGKAEDIIERINAGGFTILEKADLHITKERAHEFYKEHEGKEFYEPLTDFMSSLRALYGTDGRRNAVHGSDSVESAKREIAFFFPEFAPEEEDGVSVARKGSVGSVLVSESHGEKIAPSADEPREGSDAPQQHPQEDQPEEHEEAVHEPQEHEEPAHEEPTAPAAHEEPAHEEPVAHEEPAHEEPAHEEPAHEEPAHEEPAAAHEEPAAEEPAHEEPAHEEPAQEEPVHEEPAHEEPAHEEPAHEEPAHEEPAHEEPAAHEELAHEEPAAQQEAAQEPAAQEEATHEEPAAHEEPVAQEAAHEEPAAQEEAAQDTAQ* # PASA_UPDATE: g9661.t1, single gene model update, valid-1, status:[pasa:asmbl_7494,status:12],[pasa:asmbl_7497,status:12], valid-1 NODE_464_length_23238_cov_43.3916 . gene 7485 10583 . + . ID=g9661;Name=g9661.t1 NODE_464_length_23238_cov_43.3916 . mRNA 7485 10583 . + . ID=g9661.t1;Parent=g9661;Name=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 7485 7535 . + . ID=g9661.t1.exon1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 7485 7535 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 7646 8686 . + . ID=g9661.t1.exon2;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 7646 8686 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 8872 9038 . + . ID=g9661.t1.exon3;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 8872 9038 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 9220 9313 . + . ID=g9661.t1.exon4;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 9220 9313 . + 1 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 9519 9638 . + . ID=g9661.t1.exon5;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 9519 9638 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 9818 9910 . + . ID=g9661.t1.exon6;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 9818 9910 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . exon 10052 10583 . + . ID=g9661.t1.exon7;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . CDS 10052 10459 . + 0 ID=cds.g9661.t1;Parent=g9661.t1 NODE_464_length_23238_cov_43.3916 . three_prime_UTR 10460 10583 . + . ID=g9661.t1.utr3p1;Parent=g9661.t1 #PROT g9661.t1 g9661 MSQGDSRAETPTAAGDEDDAVAESSSSFAAESSASLRPRSGRSRPHSGVSGSPGSEYEEGDETDGAGEDQDETVEGGEDEAGVEDEDAQAEGDHESGAADGQSTHGSADLGQSSSSGKILDMHDDGDDGEHASASERGFDEDGVARSGRSSRADPPVEGDEEERAHDGEDAEDEFGESMHRDASAEFDTDGAVDRTGADSPILPAVSAAISRSASTELDGVDQTGDADGGEESLAAASKRTLAELRPTTPNGELSDRGGDEDDADHESSPVRADHRASDDEFFDDDYLGSRDAERREIDEDGVGAETGEEHDGVDNQSEAGSGEQMDRVTLLRMYADQVEERERLQSINNQLQHKLAEYFNKKKTDDRREGEKSMTDQEQRYIKCMSALDELHDELERQTERYTAQMEEFRDKLEEKKKRVEEMRQQFAAFKREVALAAENSRTGQPIPPKVVEGLEQNELRKEMEVIAVRLENIKLRNKLRKRENQLKQKEELADGLHLIDFEQLKIENQTYNEKIEERNEELLKLRKKITNTVQVLTHLKEKLQFVQIESTELRAVLRDIEAKVAHSRDILTRTKQARDALRLDNVKLRQKSGLVGNEPLLRDFEDRMERGDNLRSRLQDLQTTHAELMLSTAGFRQKIETATQTHASTRWQRVG* # PASA_UPDATE: g9662.t1, single gene model update, valid-1, status:[pasa:asmbl_7499,status:3], valid-1 NODE_464_length_23238_cov_43.3916 . gene 10603 12745 . - . ID=g9662;Name=g9662.t1 NODE_464_length_23238_cov_43.3916 . mRNA 10603 12745 . - . ID=g9662.t1;Parent=g9662;Name=g9662.t1 NODE_464_length_23238_cov_43.3916 . five_prime_UTR 12671 12745 . - . ID=g9662.t1.utr5p1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 12580 12745 . - . ID=g9662.t1.exon1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 12580 12670 . - 0 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 12151 12473 . - . ID=g9662.t1.exon2;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 12151 12473 . - 2 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 11898 12018 . - . ID=g9662.t1.exon3;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 11898 12018 . - 0 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 11582 11711 . - . ID=g9662.t1.exon4;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 11582 11711 . - 2 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 11042 11321 . - . ID=g9662.t1.exon5;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 11042 11321 . - 1 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . exon 10603 10895 . - . ID=g9662.t1.exon6;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . CDS 10761 10895 . - 0 ID=cds.g9662.t1;Parent=g9662.t1 NODE_464_length_23238_cov_43.3916 . three_prime_UTR 10603 10760 . - . ID=g9662.t1.utr3p1;Parent=g9662.t1 #PROT g9662.t1 g9662 MAPVFDLQSIVRPNIWTLVPYRCARDDYDTGILLDANENSLGSVYPDSGDLHRYPCPYQRELKKKIADLRGVDGDMVFVGVGSDEAIDILIRIFCTPAHDNIIIMPPTYGMYKVAANINDVEVVSVPLTEEFQLRPKEILAAATDKSKIIFVCSPNNPTANAIRLEDIKALLDSETFKGIVVVDEAYIDFADQESVSKLVYQYPQLVVLQTLSKAFGLAGIRLGMAIANPAIINIMSKVKAPYNVSKLTSKAALRAFESLPQLREKIAVIKSERSRVVAQLRAMPRIGKIHPSDANFILFEVSNAYKVYKNVAAQGVILRYRGDQIHCDNCIRATIGTPAENDAFISALGKAIAEECVA* # ORIGINAL: g9665.t1 original gene structure, not modified by PASA NODE_464_length_23238_cov_43.3916 AUGUSTUS gene 19546 20412 . + . ID=g9665;Name=g9665.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS mRNA 19546 20412 . + . ID=g9665.t1;Parent=g9665;Name=g9665.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 19546 19793 . + . ID=g9665.t1.exon1;Parent=g9665.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 19546 19793 . + 0 ID=cds.g9665.t1;Parent=g9665.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 19905 20412 . + . ID=g9665.t1.exon2;Parent=g9665.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 19905 20412 . + 1 ID=cds.g9665.t1;Parent=g9665.t1 #PROT g9665.t1 g9665 MNRKAHQAKQSAPWSAPRRPKPSTVPRVDARTAHTKQVVTGALNDLIGDEELVAYIADVVADVAHSVRDVTDLHEAVGETLISFGAADSSDEAFLLCGSIVGELAKHSLIEVSSASIEEKSEDADDQSTSKDTVEEDEGDAGADGALLGEGECELCERETFLTRHHLIPRTLHQRYLTKGYTRAELNAVANICRPCHSAVHRFIDLKTMGEEYNTVEKLVEHESVRKWIPYAAKMRTRTRAEALSNLQYAR* # ORIGINAL: g9659.t1 original gene structure, not modified by PASA NODE_464_length_23238_cov_43.3916 AUGUSTUS gene 3529 5664 . - . ID=g9659;Name=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS mRNA 3529 5664 . - . ID=g9659.t1;Parent=g9659;Name=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 5578 5664 . - . ID=g9659.t1.exon1;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 5578 5664 . - 0 ID=cds.g9659.t1;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 5177 5397 . - . ID=g9659.t1.exon2;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 5177 5397 . - 0 ID=cds.g9659.t1;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 4185 5023 . - . ID=g9659.t1.exon3;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 4185 5023 . - 1 ID=cds.g9659.t1;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS exon 3529 3851 . - . ID=g9659.t1.exon4;Parent=g9659.t1 NODE_464_length_23238_cov_43.3916 AUGUSTUS CDS 3529 3851 . - 2 ID=cds.g9659.t1;Parent=g9659.t1 #PROT g9659.t1 g9659 MASRAELESLSRSDLQSLCKKHGIKANGKTVDLIASLSEHILHATPKEPAELIPTSMPPTNDAPVDSVNTEEPPAASGARTSKRKGAPVSAPEPAKKRDTRRKTIAVLSENNRDSTAKTTTMVAAAALEAATPTEPVNGASSVRNEESTAAPILRHCVVHGVERNNGGDVEQGSAWGRLVLVGGRVYVECLGSVPNLPFVVRPLGGQAPHGCDDNLICQQCVRTNANEAALIGKRGGEQGTDHIAADAQNNARGIVHGSNSTAMVPAVAAVTGKENASEHANAAASQSKESIAFAHVNSAHSHPSHLHAAAPVAEMKDPSEEEVLRSRKSAIAEKRLSHFKTHRKNGAEFGTPRESRHAAIARLQSEKRLEAISRRRGIDIAATDSPSTPESAGSAYGTPSSQPRAIPFSLRQEAMERRRSVANGVREDGEVARKVELILTSTLKGSEDERRMSMEPSADSPVRRSPTRSRSAVRLATQQEARRNSLAH* # PASA_UPDATE: g9660.t1, single gene model update, valid-1, status:[pasa:asmbl_7496,status:3], valid-1 NODE_464_length_23238_cov_43.3916 . gene 6077 7143 . + . ID=g9660;Name=g9660.t1 NODE_464_length_23238_cov_43.3916 . mRNA 6077 7143 . + . ID=g9660.t1;Parent=g9660;Name=g9660.t1 NODE_464_length_23238_cov_43.3916 . five_prime_UTR 6077 6117 . + . ID=g9660.t1.utr5p1;Parent=g9660.t1 NODE_464_length_23238_cov_43.3916 . exon 6077 7143 . + . ID=g9660.t1.exon1;Parent=g9660.t1 NODE_464_length_23238_cov_43.3916 . CDS 6118 7113 . + 0 ID=cds.g9660.t1;Parent=g9660.t1 NODE_464_length_23238_cov_43.3916 . three_prime_UTR 7114 7143 . + . ID=g9660.t1.utr3p1;Parent=g9660.t1 #PROT g9660.t1 g9660 MLSSILTYKRLSTTSGNVRLFSHVSVLAKETVAFLVPAVGKGGVIVDATFGNGGHTRALLEKLGPTVRVIAIDRDPVAYERAVQLSKEDGRVIPTPPGRFSNIANICSSIGFGDSSVDAILFDFGVSSMQLDDPLRGFSFKRPGPLDMTMGSQAGTEEGGAADVIRSLSQSQLEDIIRKYGEDKNARSIARAIVAERAAKPITTTEDLARIVRRASVGADSIRIDPATRTFQAFRIFVNDEMREIERALPAASRLLNVGGRLAAISFHGLEDALVKKYIRDNSSSADDKTSANRIPTIKGLTRKPVSPTEEEILANPRSRSARLRIVERIS* # PASA_UPDATE: g268.t1, single gene model update, valid-1, status:[pasa:asmbl_3696,status:12], valid-1 NODE_2178_length_7402_cov_41.3301 . gene 4088 5862 . + . ID=g268;Name=g268.t1 NODE_2178_length_7402_cov_41.3301 . mRNA 4088 5862 . + . ID=g268.t1;Parent=g268;Name=g268.t1 NODE_2178_length_7402_cov_41.3301 . five_prime_UTR 4088 4139 . + . ID=g268.t1.utr5p1;Parent=g268.t1 NODE_2178_length_7402_cov_41.3301 . exon 4088 5862 . + . ID=g268.t1.exon1;Parent=g268.t1 NODE_2178_length_7402_cov_41.3301 . CDS 4140 5501 . + 0 ID=cds.g268.t1;Parent=g268.t1 NODE_2178_length_7402_cov_41.3301 . three_prime_UTR 5502 5862 . + . ID=g268.t1.utr3p1;Parent=g268.t1 #PROT g268.t1 g268 MVSFRAFARAGRRMAAVVVLVAALSALAVAPIGTDAHSHGVGSRGHSHSHSHSHSHSPSTMGHAGAPRTGPRDLDALPPSRATLEVYLHAFGATFLISCAPILILFFIPVDANSREESPLLRVLLAFAVGGLLGDVFLHLLPHSFADVPDGVDPHNHGVHVGTLVLAGCITFFIVEKIVRYVNRGEGGRAHSHGHGHAHAAPTAQPPTVKALAAASDDDDTAASESRRPRTRSRTRASVGDSVGDSVAASTLVRRSRKANKGGEHDDDSASHATPAHDPSETPSSAAVAACEVDTKQAAAPVDPHLAVAGMLNLVADFSHNFTDGLALGATFLSSQSLGIVTTVAILMHEVPHEVGDFAILIRAGFSKKAAMLAQVSTAVGAMLGTACGLMLQESSFAQGLVLPFTGGGFIYVALVSILPELLREARPMQTVMELAGFSVGAGMMAFIALYLE* # ORIGINAL: g269.t1 original gene structure, not modified by PASA NODE_2178_length_7402_cov_41.3301 AUGUSTUS gene 6074 7055 . - . ID=g269;Name=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS mRNA 6074 7055 . - . ID=g269.t1;Parent=g269;Name=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS exon 6930 7055 . - . ID=g269.t1.exon1;Parent=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS CDS 6930 7055 . - 0 ID=cds.g269.t1;Parent=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS exon 6682 6765 . - . ID=g269.t1.exon2;Parent=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS CDS 6682 6765 . - 0 ID=cds.g269.t1;Parent=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS exon 6074 6286 . - . ID=g269.t1.exon3;Parent=g269.t1 NODE_2178_length_7402_cov_41.3301 AUGUSTUS CDS 6074 6286 . - 0 ID=cds.g269.t1;Parent=g269.t1 #PROT g269.t1 g269 MACARASTQRIAAAMSVADAVFQNPCPYPAHCFASRRRTTVELFVSPSTKGRGGIIVPANTEFVVRVEGVADDAQGRRAFSLSCALREGYFGTCAAIRPTSPSFAVRVSVALSDAHSDAFDTGKDVTIAVTCSDPALQTR* # PASA_UPDATE: g267.t1, single gene model update, valid-1, status:[pasa:asmbl_3695,status:12], valid-1 NODE_2178_length_7402_cov_41.3301 . gene 140 3687 . + . ID=g267;Name=g267.t1 NODE_2178_length_7402_cov_41.3301 . mRNA 140 3687 . + . ID=g267.t1;Parent=g267;Name=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 140 323 . + . ID=g267.t1.exon1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 140 323 . + 0 ID=cds.g267.t1;Parent=g267.t1;5_prime_partial=true NODE_2178_length_7402_cov_41.3301 . exon 533 600 . + . ID=g267.t1.exon2;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 533 600 . + 2 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 782 925 . + . ID=g267.t1.exon3;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 782 925 . + 0 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 1257 1338 . + . ID=g267.t1.exon4;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 1257 1338 . + 0 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 1529 1687 . + . ID=g267.t1.exon5;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 1529 1687 . + 2 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 1940 2116 . + . ID=g267.t1.exon6;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 1940 2116 . + 2 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 2328 2419 . + . ID=g267.t1.exon7;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 2328 2419 . + 2 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 2775 3330 . + . ID=g267.t1.exon8;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 2775 3330 . + 0 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . exon 3464 3687 . + . ID=g267.t1.exon9;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . CDS 3464 3570 . + 2 ID=cds.g267.t1;Parent=g267.t1 NODE_2178_length_7402_cov_41.3301 . three_prime_UTR 3571 3687 . + . ID=g267.t1.utr3p1;Parent=g267.t1 #PROT g267.t1 g267 VNKFSVAGTILWSFQVERISNDGTRFRDPRDKYRDPRADGKENPALASLKGMGQYIGNYRVGKVLGTGSFGAALLATHRLTGKVVAIKAIAREKINANIEREIEILRHVRHSNIARLYEIINTPQRVFLVMEYVSGGELFDYIVNNGACTEREARGYFRDLLSAVDYLHSVGIVHRDLKLENMLLDGHGNIKLIDFGLSNFMNKGKRLDTCCGSPMYAGPEMYRGAQYEGPEVDVWSMGVILFAMLEGTHPFQQPEDVVSGRFTMPTHLSKECQDLISRMLVVDPARRVAVDQIYRHPWVNKDCDALERTFSIDQISLDSFQPDPEIVATMSDAGFSPSVVLASLRSNSFNQVTATYHFLEEKKKLRTLRGGQHKAGGPQTVVHPPSTSPMPQPAQLQAPHLQQLSAKHGTDSPRSMSPNSSTSGSSRISSGHMNDYCCGSCGRVDDRAQLSDLRIVQLIEALLPETAKVVRAQSTAGARKRRASHAANLVEQGFADVFENRAHFEQYLADVIATAKKMNFQ* # PASA_UPDATE: g359.t1, single gene model update, valid-1, status:[pasa:asmbl_4544,status:12], valid-1 NODE_2551_length_5920_cov_67.0426 . gene 4385 5843 . - . ID=g359;Name=g359.t1 NODE_2551_length_5920_cov_67.0426 . mRNA 4385 5843 . - . ID=g359.t1;Parent=g359;Name=g359.t1 NODE_2551_length_5920_cov_67.0426 . five_prime_UTR 5719 5843 . - . ID=g359.t1.utr5p1;Parent=g359.t1 NODE_2551_length_5920_cov_67.0426 . exon 4962 5843 . - . ID=g359.t1.exon1;Parent=g359.t1 NODE_2551_length_5920_cov_67.0426 . CDS 4962 5718 . - 0 ID=cds.g359.t1;Parent=g359.t1 NODE_2551_length_5920_cov_67.0426 . exon 4385 4637 . - . ID=g359.t1.exon2;Parent=g359.t1 NODE_2551_length_5920_cov_67.0426 . CDS 4546 4637 . - 2 ID=cds.g359.t1;Parent=g359.t1 NODE_2551_length_5920_cov_67.0426 . three_prime_UTR 4385 4545 . - . ID=g359.t1.utr3p1;Parent=g359.t1 #PROT g359.t1 g359 MPLFTDGPAKTKKYTVPSNGVIYGQSFICVSLNIANINIVGTQLQYYNPQVYDSRADATLAAAAPNMAAFLGGTRLSKTAGSSAAKITTRGGVTFASFAKNAKWGKDLYSGLVGPNLKTDLIIQSWMRPVEASYLKPSVAYEAINAITYREPTTGYTWTETRDHSKWAISLSPSKGIVCIGDINKQKSQFSRGGGTLCVTSCAVYNQFRALIATTDKPTTAPSPSDKCVIASKDEVVIMDEQADSVVAGTDTDPGNNAHTDRAPILSMILCAIIAAALSIVY* # PASA_UPDATE: g358.t1, single gene model update, valid-1, status:[pasa:asmbl_4545,status:12], valid-1 NODE_2551_length_5920_cov_67.0426 . gene 138 4380 . + . ID=g358;Name=g358.t1 NODE_2551_length_5920_cov_67.0426 . mRNA 138 4380 . + . ID=g358.t1;Parent=g358;Name=g358.t1 NODE_2551_length_5920_cov_67.0426 . five_prime_UTR 138 138 . + . ID=g358.t1.utr5p1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . exon 138 863 . + . ID=g358.t1.exon1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . CDS 139 863 . + 0 ID=cds.g358.t1;Parent=g358.t1;5_prime_partial=true NODE_2551_length_5920_cov_67.0426 . exon 1140 1817 . + . ID=g358.t1.exon2;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . CDS 1140 1817 . + 1 ID=cds.g358.t1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . exon 2012 2110 . + . ID=g358.t1.exon3;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . CDS 2012 2110 . + 1 ID=cds.g358.t1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . exon 2320 3306 . + . ID=g358.t1.exon4;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . CDS 2320 3306 . + 1 ID=cds.g358.t1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . exon 3520 4380 . + . ID=g358.t1.exon5;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . CDS 3520 4093 . + 1 ID=cds.g358.t1;Parent=g358.t1 NODE_2551_length_5920_cov_67.0426 . three_prime_UTR 4094 4380 . + . ID=g358.t1.utr3p1;Parent=g358.t1 #PROT g358.t1 g358 RKPQIEGVDGVDDDCNGVVDDVLTPSATVRARLAVLMGGLQINDPEASTLIAVLDQWGVAYDVIANNDVDAALPTLSSSYAAAIVPVAVADWMTVDRASALQAFVSVGRSLIMVRPSSSLALALGGIVSAAESTDAVWIQWDNSAFASREGRSVLSHIDSNEESILQIVDKPTFGFNVAVQVYTPAVGAVSLASTFGTPPTYEGSKYTIYGKSMELNSLIGARLGSIAVGRAIGKGMVYSLGHNFMTYYHYLAYTNYFEPAIDLFGIGFLRGAISEGSSGRYAFKHTVPGVEDSIIFMSHDCMWNETGVREMADAALDYTARPTFYIQTPLFTDGKDLVKYLCTRDVCPIAGHSVTHKLEISKLPVGDCTRTPEQIIADYEASGANPATMCDEILFTKAAIARDTQGAQIIRNWRTPYLGVNPVQFPILEAAGFTLDSSIAISELKTNLPIATDKYSPMQFIFKGAKMYEMVIPCEDGYALPGGARTDLQSGNIGWFTHTWFYVAMHNKANHAVTVILDHPMVGYNSFDVDNSAGKVAAARRTYEFAKKNGMRTDIAMEEYIDWWSAREKTDVDVRFNPTSGKYEGTIKTPQQSSTVNNLAIEFGDAIKDFTCQQCQGSIVIVNRRVVIERLSAGASVTFVATPGLATGPSNGSVDACTAGSANWLAIEAAASHPANGTNALGLSTRDSSALASSSTPTQLILGVAGRNDGGSYYTPVSTNGLCLDATSYPTLVMRLSVKDPSDVHFRIHVVSASDGVCDWIKPRQAASVYSGDYITSSKAVAGGGTIVEISVPMASFLGVSGMALTAILLDSFGDMKGSVIVQGLGFSRCTPSGTRPVRPPNCPADLLLDNFLSVRETAFNALGFATGDDGSMGFLSVAGGRLHLRAQSTSSMWFTNLATDKCADVSAFKALSFRMEAYAGTSLVVGFQLAEGDCPSFNRTSAVAYAVVSNPTDNDGSERHVTILFSEFVDRNGVALGANGRGSVGYNVLRDVKSLFLTSLIPGFEYVIDEVTLIRQCA* # ORIGINAL: g6301.t1 original gene structure, not modified by PASA NODE_1014_length_14678_cov_52.3459 AUGUSTUS gene 12256 14602 . + . ID=g6301;Name=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS mRNA 12256 14602 . + . ID=g6301.t1;Parent=g6301;Name=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 12256 12374 . + . ID=g6301.t1.exon1;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 12256 12374 . + 0 ID=cds.g6301.t1;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 12569 12665 . + . ID=g6301.t1.exon2;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 12569 12665 . + 1 ID=cds.g6301.t1;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 12864 14396 . + . ID=g6301.t1.exon3;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 12864 14396 . + 0 ID=cds.g6301.t1;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 14564 14602 . + . ID=g6301.t1.exon4;Parent=g6301.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 14564 14602 . + 0 ID=cds.g6301.t1;Parent=g6301.t1 #PROT g6301.t1 g6301 MGAASVEELSCALVREFLNRRGCKSTLETMERELPRSEKSISSRAELVRSLKVEKLVRKNKESDASLATILEVIVRYLSDRRSGQEGDEKQRDDAPGRSTSPRPDGKEAKDAKLSPKDPTRGEYPASMSSSSGKDRPHSAATSLGDASLGLRSNGNRRLQRDREPPSSLTTGSNVGVGDKTSVRHVDIPASPRGRMGSDHGAHSQFSSSGLVGLRPADSRDTHRERERERELHDTPSARLGVSDMSLEELSPPHSHGTARARTMKDAGSGPAFSRSSQASSAGALSMSGVSASGSMQLPQPSNQRSLHGVPKGSHIDEMQLLDLEIDDDPDDHRGSSPPRKGSLGPLPSTMGNSGRDAAGRGGHSMVPPVPVSADMAMQLKRLVFGAGSASFGPEWRRQSLIFSDAPDVRYGIVQHKGGPCGVLAAVQAHVIRHLIYSDTAESVSASSSVRRTSARTLILSPSDTQRNEALASAIAEMLWRCGEMRQAVVAIPGRSAGASSNNFGPHYKADKLTEVLVLHRAESVDALASLVRSSMWAFQGEGGDGCCLLLYSAILSRGIDKIKADMDEDNGRLMGAHGYCTQFSTLTDDDCDGV* # ORIGINAL: g6300.t1 original gene structure, not modified by PASA NODE_1014_length_14678_cov_52.3459 AUGUSTUS gene 8369 11299 . + . ID=g6300;Name=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS mRNA 8369 11299 . + . ID=g6300.t1;Parent=g6300;Name=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 8369 8487 . + . ID=g6300.t1.exon1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 8369 8487 . + 0 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 8672 8745 . + . ID=g6300.t1.exon2;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 8672 8745 . + 1 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 9134 9226 . + . ID=g6300.t1.exon3;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 9134 9226 . + 2 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 9413 9507 . + . ID=g6300.t1.exon4;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 9413 9507 . + 2 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 9708 10078 . + . ID=g6300.t1.exon5;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 9708 10078 . + 0 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 10442 10587 . + . ID=g6300.t1.exon6;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 10442 10587 . + 1 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 10920 11014 . + . ID=g6300.t1.exon7;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 10920 11014 . + 2 ID=cds.g6300.t1;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 11225 11299 . + . ID=g6300.t1.exon8;Parent=g6300.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 11225 11299 . + 0 ID=cds.g6300.t1;Parent=g6300.t1 #PROT g6300.t1 g6300 MASGMELYILTYRVQLASIAKTAIDRYSHALTKLIFFSGERNTFFSLTETAQEFSVIIDEDSAKELPAGDGISLCPDTWRLLQVCPGEQEGVEWTAQTGIVKSVTKPLADANITIVYMSTFQTDFVLVQQQNLELAVGVLGANFRIIDESLNDSTGHVVSSSGTSYGGHLAVALAKQDGPVASPRVQRKPAGTAGGDRECDGREYGVAVRRKRHPFVVHPNRLVLACLDTMQMQSIGLPIIKALFYAEGERRFFSFAMVDNDVSLVMDDTYLAELPSDALRLSDTMWRVIQIDDGPLGFEEAGVVAQFSEPLADNNVHIFYISTFTTDWILVNENELEVAVDALEERNKAATDAD* # ORIGINAL: g6299.t1 original gene structure, not modified by PASA NODE_1014_length_14678_cov_52.3459 AUGUSTUS gene 3726 7557 . + . ID=g6299;Name=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS mRNA 3726 7557 . + . ID=g6299.t1;Parent=g6299;Name=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 3726 4052 . + . ID=g6299.t1.exon1;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 3726 4052 . + 0 ID=cds.g6299.t1;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 4199 4252 . + . ID=g6299.t1.exon2;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 4199 4252 . + 0 ID=cds.g6299.t1;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 4514 4895 . + . ID=g6299.t1.exon3;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 4514 4895 . + 0 ID=cds.g6299.t1;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS exon 5255 7557 . + . ID=g6299.t1.exon4;Parent=g6299.t1 NODE_1014_length_14678_cov_52.3459 AUGUSTUS CDS 5255 7557 . + 2 ID=cds.g6299.t1;Parent=g6299.t1 #PROT g6299.t1 g6299 MQRLSVPVSPHYVPRDLDDVSDNDDDDCRLNVSFASSGKSWSEFDFREFYGSRPPSFPSPAAVQKPRTLSALTGESPPAVSAPTANSASKRRSSAGVVYGDALNNANHQSSRTLSEKQIDNSIREDKSRVLAIMHHHMLYHSQHRMLHHSRNTTCSIRAVNASSGESPSLPSPPTHAASPPQHDSVGSPRLVSVGSVRSFAKSQSVARLSSVRSGQRDSAANSPKGQSESAPTASRTDFDDFLLDECAETDSAEDDIAMTSIRCWSDIKRAVRIDLPVVPFSGLGMTLAPLRTQQQQQQQQQQPKTTTAQKTEQAKGVYVAQVVSGGVADRNGVCVGDRILRVNGRSCDGLDPPAVISLIGDSVDAISVVLIKLLSSGTSADPSRILDAWINSGVKDYDTLRRGLSVGSPMSPASAPGHKPMPSDDSRSTRASTWDSEKSPRGTPRAPTAADRGEDSFGAGAALPLSVSSLSSSSGVDGRGGRAASDPTASRPQPQSAAITPDAEETGIWDEPLCAGVNIVFDAQGDVRGGTLNALVTYLTSEHDPEFLSVVLMTHRSFCSSEDLVKRLIQRFWGPPQGSPAASLPEVCDADACKNRRARVTNALKKLIDSESVDLPDKVVLVVRAFLKRLLEDGDMASQAPRQLIASLYRRTSVDRTGVDPSLASTSASVVAAASDGDAAQSSPLQSSGLQRVDTARAKSMSADKDKDNGTSDSSASALSPGMILLGKDSLGNAILVPRGVPPAAPDARALMSLSSKTIARQVTAVDHAMYRAIRPIELLDQSWSKADRRHNSANVLSFIRRFNILSRLVASSILSADKKPQGRGAAFEKWIKVAQHLHQLNSFNALTAVIAALGNSAVARLKVSKMWISRERTEALEKLCEFLAPSGSYRAYRNYLHSINPPCVPYLGVYLTDLTFIGDGNSNEISPGSINMTKRRMEHRVIYEVQQYQQSAYSDIAMDPVVIGMIEAYPLMADDGEMFKVSLEVEPRGADVGQAPSELQKKLAKKKGALDALIKGDKK* # PASA_UPDATE: g6298.t1, single gene model update, valid-1, status:[pasa:asmbl_53,status:12],[pasa:asmbl_54,status:12], valid-1 NODE_1014_length_14678_cov_52.3459 . gene 294 2624 . + . ID=g6298;Name=g6298.t1 NODE_1014_length_14678_cov_52.3459 . mRNA 294 2624 . + . ID=g6298.t1;Parent=g6298;Name=g6298.t1 NODE_1014_length_14678_cov_52.3459 . exon 294 410 . + . ID=g6298.t1.exon1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . CDS 294 410 . + 0 ID=cds.g6298.t1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . exon 752 844 . + . ID=g6298.t1.exon2;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . CDS 752 844 . + 0 ID=cds.g6298.t1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . exon 1127 1250 . + . ID=g6298.t1.exon3;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . CDS 1127 1250 . + 0 ID=cds.g6298.t1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . exon 1483 1691 . + . ID=g6298.t1.exon4;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . CDS 1483 1691 . + 2 ID=cds.g6298.t1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . exon 2099 2624 . + . ID=g6298.t1.exon5;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . CDS 2099 2242 . + 0 ID=cds.g6298.t1;Parent=g6298.t1 NODE_1014_length_14678_cov_52.3459 . three_prime_UTR 2243 2624 . + . ID=g6298.t1.utr3p1;Parent=g6298.t1 #PROT g6298.t1 g6298 MHCSFYPGQLSTWVVSTVCLGSSVKERVRSVSKFIKVAHYCRNMSNFNAVFALMGGLRHYILSRMSETWAKVPTRTMTMFKKLETLLDPSRNMLRYRTALVSAPAPVVPMLALITKDLVFAADGNPKTVDDGALVNFERLRLLASVVNGAAVYQLMPYDPTALKEAISSRSEKTGSVTSAKVKLTNAVIVPPSSWGPTEDRAYRYLRALPVIPDEKELVHLCEIRPEK* # ORIGINAL: g6158.t1 original gene structure, not modified by PASA NODE_2591_length_5766_cov_34.3834 AUGUSTUS gene 575 3524 . - . ID=g6158;Name=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS mRNA 575 3524 . - . ID=g6158.t1;Parent=g6158;Name=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 3098 3524 . - . ID=g6158.t1.exon1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 3098 3524 . - 0 ID=cds.g6158.t1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 2886 2977 . - . ID=g6158.t1.exon2;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 2886 2977 . - 2 ID=cds.g6158.t1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 2185 2367 . - . ID=g6158.t1.exon3;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 2185 2367 . - 0 ID=cds.g6158.t1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 1756 1854 . - . ID=g6158.t1.exon4;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 1756 1854 . - 0 ID=cds.g6158.t1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 1081 1345 . - . ID=g6158.t1.exon5;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 1081 1345 . - 0 ID=cds.g6158.t1;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS exon 575 663 . - . ID=g6158.t1.exon6;Parent=g6158.t1 NODE_2591_length_5766_cov_34.3834 AUGUSTUS CDS 575 663 . - 2 ID=cds.g6158.t1;Parent=g6158.t1 #PROT g6158.t1 g6158 MPEGDTDGADEFEFRPKRQRTDGSGSALFDRVVETAEHKDALDARTCSSPQPSPLVASSDSNTALAARKSDDQVQDAPYTPSCAFPLAHVSVSREDRVDDERIAVVGEADGSKKQLDRSINDSASRSVSLGTLSILPVSQFEGRMSAYRQPKEVGCMSSDHVRRWLYEDRSGLRSYVGVDVVQGLCDLRRGYSNYIQRPETPKEHLTPMIGWIQHHEQLEKLQGKPTAGSDACKKAKFVTWRGIITRIMCTPYSQRDSWILVACKRKGRIYVSELDTPDTLRRRAQETDRDRLFCYFGYSFEQYATRERESRATPAHPRDLPDIRVNTHESFCTIMRTGIGAHSLLIGAEIDCCDDRIRTFPEAYIELKTSKVIQNERDTINFE* # ORIGINAL: g14455.t1 original gene structure, not modified by PASA NODE_5428_length_856_cov_27.5954 AUGUSTUS gene 183 740 . - . ID=g14455;Name=g14455.t1 NODE_5428_length_856_cov_27.5954 AUGUSTUS mRNA 183 740 . - . ID=g14455.t1;Parent=g14455;Name=g14455.t1 NODE_5428_length_856_cov_27.5954 AUGUSTUS exon 618 740 . - . ID=g14455.t1.exon1;Parent=g14455.t1 NODE_5428_length_856_cov_27.5954 AUGUSTUS CDS 618 740 . - 0 ID=cds.g14455.t1;Parent=g14455.t1 NODE_5428_length_856_cov_27.5954 AUGUSTUS exon 183 305 . - . ID=g14455.t1.exon2;Parent=g14455.t1 NODE_5428_length_856_cov_27.5954 AUGUSTUS CDS 183 305 . - 0 ID=cds.g14455.t1;Parent=g14455.t1 #PROT g14455.t1 g14455 MAERVNKPLTEAEILHVFTDVCEGVAHVHTVSPPIVHRDLKIENILRGSDGIFKLCDFGSATDAIVRPQGTAGIAAIEEDIQ # ORIGINAL: g8252.t1 original gene structure, not modified by PASA NODE_704_length_18828_cov_42.4708 AUGUSTUS gene 5751 7608 . + . ID=g8252;Name=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS mRNA 5751 7608 . + . ID=g8252.t1;Parent=g8252;Name=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 5751 5923 . + . ID=g8252.t1.exon1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 5751 5923 . + 0 ID=cds.g8252.t1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 6226 6393 . + . ID=g8252.t1.exon2;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 6226 6393 . + 1 ID=cds.g8252.t1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 6536 6608 . + . ID=g8252.t1.exon3;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 6536 6608 . + 1 ID=cds.g8252.t1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 6781 6828 . + . ID=g8252.t1.exon4;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 6781 6828 . + 0 ID=cds.g8252.t1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 7102 7216 . + . ID=g8252.t1.exon5;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 7102 7216 . + 0 ID=cds.g8252.t1;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 7457 7608 . + . ID=g8252.t1.exon6;Parent=g8252.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 7457 7608 . + 2 ID=cds.g8252.t1;Parent=g8252.t1 #PROT g8252.t1 g8252 MASSARWELNVPVPVLAVFPITTFCLGVWQMRRLEWKTNLIKKMEDRAAGLPVQLPEDPYAAAELEHARVVVRGVFEHSKEMYVGPRSEITQGESKPGRIGAVVITPLRRTDHDSTILVNRGFVPAEKLNPKARPETQVDGEQLVIGYVKRGEEAMPYMPANRPDKNEWRWIDLMQMADWVNARPIIVYAARDGKPGAIPAGSQFQQEKLSNNHGWYAFTWFSLALISGAMTVARFRRRGFR* # ORIGINAL: g8255.t1 original gene structure, not modified by PASA NODE_704_length_18828_cov_42.4708 AUGUSTUS gene 13067 17956 . - . ID=g8255;Name=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS mRNA 13067 17956 . - . ID=g8255.t1;Parent=g8255;Name=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 17853 17956 . - . ID=g8255.t1.exon1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 17853 17956 . - 0 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 17641 17734 . - . ID=g8255.t1.exon2;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 17641 17734 . - 1 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 17291 17378 . - . ID=g8255.t1.exon3;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 17291 17378 . - 0 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 17047 17123 . - . ID=g8255.t1.exon4;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 17047 17123 . - 2 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 16242 16312 . - . ID=g8255.t1.exon5;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 16242 16312 . - 0 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 16025 16082 . - . ID=g8255.t1.exon6;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 16025 16082 . - 1 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 15698 15782 . - . ID=g8255.t1.exon7;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 15698 15782 . - 0 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 14968 15066 . - . ID=g8255.t1.exon8;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 14968 15066 . - 2 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 14731 14832 . - . ID=g8255.t1.exon9;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 14731 14832 . - 2 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 14384 14453 . - . ID=g8255.t1.exon10;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 14384 14453 . - 2 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 14035 14207 . - . ID=g8255.t1.exon11;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 14035 14207 . - 1 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 13739 13853 . - . ID=g8255.t1.exon12;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 13739 13853 . - 2 ID=cds.g8255.t1;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 13067 13472 . - . ID=g8255.t1.exon13;Parent=g8255.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 13067 13472 . - 1 ID=cds.g8255.t1;Parent=g8255.t1 #PROT g8255.t1 g8255 MRHARALGASVFGQDDIHAKLVTFVTAWKANGCKRPLLFVGLDIKGAFDSIEQNKLFSIVQDIVKEDEYMLRKYASLISAAGKVRREFRRKVASTGEFVQFVDAAKGIATGGFRRGILCDQVGKRFYRQKTGISQGSVLSTLLCSYFYGDMESRLLPYVPLIDGVLLRLVDDFLLITTSPSLASEFSDLMHAGMPEYGCVVNSDKTLVSFPLEFRGKRLRQLQQTDADVSGRRLFPWCGLLIDCDSLEVRADYARYVGMYMTDTLTVDRFGAPGSGLPGKLMQFLKPKCHALLLDPRLNSADTVRINIAEMLHIAAIKFHCHVRALPAGQRTNSNPRFFASVVFGAMSYLHSLIRQRLSGVHPASASGVRGPSHDEVVWLGVDAFLRVLETKQAEYSALIAILRGADRRLRAAASRAHSIDPRHTLPVINNRANAPHTVGIAGSSGGERPSALLHVPNAISNTNTNTDAIPQSARKESVGGGNGKDDAMMRLRTVISSRVHEKTSKAFKSMLY* # PASA_UPDATE: g8253.t1, single gene model update, valid-1, status:[pasa:asmbl_8970,status:3], valid-1 NODE_704_length_18828_cov_42.4708 . gene 7777 9614 . - . ID=g8253;Name=g8253.t1 NODE_704_length_18828_cov_42.4708 . mRNA 7777 9614 . - . ID=g8253.t1;Parent=g8253;Name=g8253.t1 NODE_704_length_18828_cov_42.4708 . five_prime_UTR 9609 9614 . - . ID=g8253.t1.utr5p1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . exon 9351 9614 . - . ID=g8253.t1.exon1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . CDS 9351 9608 . - 0 ID=cds.g8253.t1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . exon 9094 9270 . - . ID=g8253.t1.exon2;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . CDS 9094 9270 . - 0 ID=cds.g8253.t1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . exon 8624 8945 . - . ID=g8253.t1.exon3;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . CDS 8624 8945 . - 0 ID=cds.g8253.t1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . exon 8345 8486 . - . ID=g8253.t1.exon4;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . CDS 8345 8486 . - 2 ID=cds.g8253.t1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . exon 7777 8194 . - . ID=g8253.t1.exon5;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . CDS 7909 8194 . - 1 ID=cds.g8253.t1;Parent=g8253.t1 NODE_704_length_18828_cov_42.4708 . three_prime_UTR 7777 7908 . - . ID=g8253.t1.utr3p1;Parent=g8253.t1 #PROT g8253.t1 g8253 MKFVYALQIRASFMVRWLKRKLLFGEDDSDVNAMAPVYRRCVVSWAAFLALCLWVAGGYAVAPGTTSATPGHFIVLPLGVSGGIREGSLTSFALASSSNTSAWVMMDGGTIMSGLLAIRTETYSQFIPNSERTQTGSTDQMLFLSRIQAYLVTHGHLDHCEGIAVISPDDGKKRIVGLNSTINSIVKNIFNWESWPNMGNEGINPLKTYTYMRVNPKVAYAIPGTPFTVEAFPLSHSGITSTAFFIKDTTSGNYVLFFGDTGPDAVEKVTLLRDVWTRAAPLVTSKKLQAIFIECSYANGRADNLLFGHLTPSWILSELSVLSSRLPETTTYRPTVVVIHVKPSTRAKEVAEAVVLSQLTAPKGPNTNKNMGYRFVVLSQGRAYDLNNGLFKNR* # ORIGINAL: g8254.t1 original gene structure, not modified by PASA NODE_704_length_18828_cov_42.4708 AUGUSTUS gene 10678 12769 . + . ID=g8254;Name=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS mRNA 10678 12769 . + . ID=g8254.t1;Parent=g8254;Name=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 10678 10752 . + . ID=g8254.t1.exon1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 10678 10752 . + 0 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 10860 10974 . + . ID=g8254.t1.exon2;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 10860 10974 . + 0 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 11109 11129 . + . ID=g8254.t1.exon3;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 11109 11129 . + 2 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 11270 11361 . + . ID=g8254.t1.exon4;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 11270 11361 . + 2 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 11474 11593 . + . ID=g8254.t1.exon5;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 11474 11593 . + 0 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 11730 12033 . + . ID=g8254.t1.exon6;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 11730 12033 . + 0 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 12334 12393 . + . ID=g8254.t1.exon7;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 12334 12393 . + 2 ID=cds.g8254.t1;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 12699 12769 . + . ID=g8254.t1.exon8;Parent=g8254.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 12699 12769 . + 2 ID=cds.g8254.t1;Parent=g8254.t1 #PROT g8254.t1 g8254 MILAGQRPENIMEIASRALSFWSYQQHQEMCFLENATAKAKEHVIKMQQQYEHTITTYANELTAIKSQLSAAQMDMDSEKKRSHDLSERLSEKARQHQKLQALYDSLRRKTIAVSSAHNAQRDGAQGMGQAVRHFPGSQDEEAGLRSPFIAHPLSAHSAQGNHQHQQASHIRGPAAAVAQTVASVANAAGNGVMRFGGPQMPVHGDHNQCGGTMGSGVPVRRHALGSAPLSQENRGPFIRPEGLPHAHSQRDEHENINGSIEDFQLQPNLRPNGHSSQSQQQMPR* # ORIGINAL: g8250.t1 original gene structure, not modified by PASA NODE_704_length_18828_cov_42.4708 AUGUSTUS gene 414 3101 . + . ID=g8250;Name=g8250.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS mRNA 414 3101 . + . ID=g8250.t1;Parent=g8250;Name=g8250.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 414 1709 . + . ID=g8250.t1.exon1;Parent=g8250.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 414 1709 . + 0 ID=cds.g8250.t1;Parent=g8250.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 1866 3101 . + . ID=g8250.t1.exon2;Parent=g8250.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 1866 3101 . + 0 ID=cds.g8250.t1;Parent=g8250.t1 #PROT g8250.t1 g8250 MAFQSVEEIRLQAERCVAPPRDLHTRRQVRFLLACNEGVELDGCESPADGMKTVRPAARNVQAVGDSDEGIGGCSCAATTDAESADGNEVHRVAYDEAYRKYLQLRREVDTIVNKLKEARLKHAALDAEQPKGTEAMSRTINVTEYFARENKIKQLTDQIASLEKEKVSAEEKLRRSYAAVAHCKVALAPQRSPLDAESRDRVVLLLNRKRDEMRLAISHLRNVQPASAPTPSCSPAPPAFVPAQQSRMHVIAGSPPARTTPSKQVAVDAVPTPSRSAAVAARAGLPVRTRASASPTTATPPHPQTHNPRAVTASFASPMITAMSPTVTPPPPTGVTSASASSSSSSSSFASATVTTATVDALRGIAAPTLSRSRELREMRSRMEVEAPLLHTVARETGLPIEHYIPRAQLRTWVTSSDVTPWEEIITWKEKVVITRPFCVRVSVNSPEELLAASGTTDGLVEGERRTPLPVGRFGVSNRRPYGSTVAYDALKDAAEVCALFASHNRKQARLMSLLGMTVDENGLLRSVYERPCSASVPLYLLQDFILRRQEGFLDSVYSTQAVNRHILLNVASGMKYLHNNVNAIHGRLDTTCIYVWFIPSKAGDGDSPHLTVHATIGSVDGCISLANSRPVPAPINISVLPDDCRQYMAPECLSGAGLLKASDVYSFDMIAYQVYTGQSPFGTPVQRQASSGDLAMSVLRGRRPFIHTSNFTPEVRNFIDRCWHALPSSRPTFENIRKSAFTSCWVGIQPSDACAQHCVSCSASEESVGRLVDGTKTLTTGRTMMPGSRKYISLLVCAGCNGKMREGAAFAVAATLCFAHVGADQYDEESAEYQPHVTWVG* # ORIGINAL: g8251.t1 original gene structure, not modified by PASA NODE_704_length_18828_cov_42.4708 AUGUSTUS gene 3676 4446 . - . ID=g8251;Name=g8251.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS mRNA 3676 4446 . - . ID=g8251.t1;Parent=g8251;Name=g8251.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS exon 3676 4446 . - . ID=g8251.t1.exon1;Parent=g8251.t1 NODE_704_length_18828_cov_42.4708 AUGUSTUS CDS 3676 4446 . - 0 ID=cds.g8251.t1;Parent=g8251.t1 #PROT g8251.t1 g8251 MDADQTAALPKKIGATRRPYCVWTCPCRPEGWIYRERGLFHRHCHVVHPDLNLTSFEDITGPYTPQRRQELAHMYKMQPKAKPSASGGEADFKAGLSRPYRSSSDEENNARGRKRRSPKSKTFVDEDDDGDSGEEESKPTPTNKRRRVSTRDAAVGDDGSPSRQRVGGRRGASEQAAEYLTHMQTPEEMKKVFLVTQALLSFAGGSGPFGESAPAGSASSDASRLLPATPSSDSHPSDTRPNTGGMTSIPVMAPLS* # PASA_UPDATE: g6278.t1, single gene model update, valid-1, status:[pasa:asmbl_2924,status:12], valid-1 NODE_188_length_32872_cov_43.2989 . gene 18506 20733 . + . ID=g6278;Name=g6278.t1 NODE_188_length_32872_cov_43.2989 . mRNA 18506 20733 . + . ID=g6278.t1;Parent=g6278;Name=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 18506 18661 . + . ID=g6278.t1.exon1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 18506 18661 . + 0 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 18766 18892 . + . ID=g6278.t1.exon2;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 18766 18892 . + 0 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 18967 19082 . + . ID=g6278.t1.exon3;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 18967 19082 . + 2 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 19176 19324 . + . ID=g6278.t1.exon4;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 19176 19324 . + 0 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 19428 19584 . + . ID=g6278.t1.exon5;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 19428 19584 . + 1 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 19689 19920 . + . ID=g6278.t1.exon6;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 19689 19920 . + 0 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 20005 20115 . + . ID=g6278.t1.exon7;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 20005 20115 . + 2 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 20208 20322 . + . ID=g6278.t1.exon8;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 20208 20322 . + 2 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 20425 20500 . + . ID=g6278.t1.exon9;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 20425 20500 . + 1 ID=cds.g6278.t1;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . exon 20608 20733 . + . ID=g6278.t1.exon10;Parent=g6278.t1 NODE_188_length_32872_cov_43.2989 . CDS 20608 20733 . + 0 ID=cds.g6278.t1;Parent=g6278.t1 #PROT g6278.t1 g6278 MIAAAWATTVGVALCVLVALGGWAGCFKRRGGGPLRTCVVVLGDIGRSPRMQYHALSLAKAGNLVDLVGYAGATPTANVRNHPSIRFVHLRPFPSLPRYLFVLSAPLKVAFQVAQLFVTLTMRVRTPDSVLIQNPPSIPTIAVARAASWLQRAKLVVDWHNYGWSILALSLGETHPFVGVARWYEQFFGRMGDAHLCVTRAMARDLGAKWSIRASTLYDRPPPQFRESTVDERHELFVRLRVGGTNHKSAGEGVTPFTRRGTDENVTLRPDRPALLVSSTSWTEDEDFGVLLDALVAYDNAANGPHIVCVITGKGPLKEFYEHKIESLNMIRVRIQTVWLEPEDYPVLIGSADLGICLHKSSSGLDLPMKVVDMFGCGLPVCAINFQCLDELVKDDVNGLIFNSSDELSKQIQELFKDFPTRMTTIEKLKGGVRSFQTVRWDDAWDATASFLFC* # ORIGINAL: g6280.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 23082 26508 . - . ID=g6280;Name=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 23082 26508 . - . ID=g6280.t1;Parent=g6280;Name=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 26380 26508 . - . ID=g6280.t1.exon1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 26380 26508 . - 0 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 25982 26223 . - . ID=g6280.t1.exon2;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 25982 26223 . - 0 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 25375 25888 . - . ID=g6280.t1.exon3;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 25375 25888 . - 1 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 25129 25261 . - . ID=g6280.t1.exon4;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 25129 25261 . - 0 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 23980 24515 . - . ID=g6280.t1.exon5;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 23980 24515 . - 2 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 23649 23727 . - . ID=g6280.t1.exon6;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 23649 23727 . - 0 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 23357 23439 . - . ID=g6280.t1.exon7;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 23357 23439 . - 2 ID=cds.g6280.t1;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 23082 23204 . - . ID=g6280.t1.exon8;Parent=g6280.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 23082 23204 . - 0 ID=cds.g6280.t1;Parent=g6280.t1 #PROT g6280.t1 g6280 MVAEGTVRAGEQSRFHHLLQPLRDLAVNWNVDIASELEEYLAEIEKIAFSFDGGLTTLNFAEAALLIQGSACIYSRKVEYLHTLVHQTLELLSAKGRKGDKHGIEAQRTDDADADAYFTADSEELLTLDDIRESENIDLADEGFVDGDGGRMRSSQHTVPRAPLALLSTPSRDDAASDQSRGAAAAHPSAEALVGPTGEVLGRRGDFRMNTALVHESGALLLDVSGLRDAPAVDRHVSACSSDTVKNTLNSAPLQLHADHTGMAPDVSEGMHDAGDDWGDVGDWGGDAGDENAKENVAPAQSAHDDARPRKSRAAVKDDPWAPLDPHDDTHSDARPFKRGNTSKAPKSVRVPLSSHGQLGTAPSTSWLRGVSRPELAPLYVEEQSRRNKMSIGAGVGRKRAVSDHFFDEFADGDDGADADDDGAGSTGPTDAPWDIGGGCDWDAPDAHAHVDGADGGSAVHDGPPSLALDAHSLSYEELVRLRVEAYLTEAQLHAQQTKLAQRVHAWEERIRPALDAEELRPAFDINAASIHLLETFTPDDTAKAEPKPFADIVLDKPRFEVCRAFVSCLQLANLGNISIVADAEQQSMSIRVLSLQVDNRIEGYRAPSLAT* # ORIGINAL: g6279.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 21263 22984 . + . ID=g6279;Name=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 21263 22984 . + . ID=g6279.t1;Parent=g6279;Name=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 21263 21378 . + . ID=g6279.t1.exon1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 21263 21378 . + 0 ID=cds.g6279.t1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 21472 21965 . + . ID=g6279.t1.exon2;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 21472 21965 . + 1 ID=cds.g6279.t1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 22088 22273 . + . ID=g6279.t1.exon3;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 22088 22273 . + 2 ID=cds.g6279.t1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 22410 22496 . + . ID=g6279.t1.exon4;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 22410 22496 . + 2 ID=cds.g6279.t1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 22654 22791 . + . ID=g6279.t1.exon5;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 22654 22791 . + 2 ID=cds.g6279.t1;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 22911 22984 . + . ID=g6279.t1.exon6;Parent=g6279.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 22911 22984 . + 2 ID=cds.g6279.t1;Parent=g6279.t1 #PROT g6279.t1 g6279 MPGGVKRKAVPQERLPAGTPTLRGGNPTQGKQNGKATTSAVSDSRFVESAKVQALPPGDTCIALPSGEELSGTPTMQSVSGEPSALLSTASLPSLETCLTSTDTTSRAATASGNDNSGDHAVDDNDAGGGVADWESAWDGEGAITAAVERLSIHVRDAREVAPPQAQPISKSSAQSSARSSGYSSPSFCAEEASSAAPLAMRGGTSLPPRTDACDRTVEAYGFSGDMRAGELTRELAPLVALTGQYTLKWIDSTHALLTFATASAADTAVAVCRSDVVKLRPFAFASTQAKDALGGCVPQRPQTTAMVARRLVTGALGIRAPPRSKEELDKDKRIMAEAKERREQRRKNKSDGGANGASGAWDS* # ORIGINAL: g6271.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 3843 6045 . + . ID=g6271;Name=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 3843 6045 . + . ID=g6271.t1;Parent=g6271;Name=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 3843 3991 . + . ID=g6271.t1.exon1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 3843 3991 . + 0 ID=cds.g6271.t1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 4325 4489 . + . ID=g6271.t1.exon2;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 4325 4489 . + 1 ID=cds.g6271.t1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 4889 5018 . + . ID=g6271.t1.exon3;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 4889 5018 . + 1 ID=cds.g6271.t1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 5344 5414 . + . ID=g6271.t1.exon4;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 5344 5414 . + 0 ID=cds.g6271.t1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 5609 5733 . + . ID=g6271.t1.exon5;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 5609 5733 . + 1 ID=cds.g6271.t1;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 5897 6045 . + . ID=g6271.t1.exon6;Parent=g6271.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 5897 6045 . + 2 ID=cds.g6271.t1;Parent=g6271.t1 #PROT g6271.t1 g6271 MDATIHSKGCFSVASFFATADAAAQRTLQAISMEATQPCCRCLLIAPPGSGKTSLVFQLARAAAESGEQVLFLCGSRERMLSRLPMRMHGMSAPAETTLRNIRISYAETPAALRKLLASAHLNADDTPGTVVLDDLDCFFPTGGASASFDPTGLAKTLALFMDAVDYWNDQLARRGGRCVKLVVVDGMGSQCEQRRMVASLWFSQIVSVSPVAAMNSNGARFSITISQSKTMPLKGCDDDSQTPSIVYELRDNTVHVMPAPA* # ORIGINAL: g6281.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 27699 28022 . + . ID=g6281;Name=g6281.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 27699 28022 . + . ID=g6281.t1;Parent=g6281;Name=g6281.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 27699 27799 . + . ID=g6281.t1.exon1;Parent=g6281.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 27699 27799 . + 0 ID=cds.g6281.t1;Parent=g6281.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 27896 28022 . + . ID=g6281.t1.exon2;Parent=g6281.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 27896 28022 . + 1 ID=cds.g6281.t1;Parent=g6281.t1 #PROT g6281.t1 g6281 MDEFLYVFSTEFFVPREVKVVDLDTHAFRIRVTGKGETFDRAKHTQGTEVKAITYSNMQIHQKDGRADIYVIVDI* # PASA_UPDATE: g6282.t1, single gene model update, valid-1, status:[pasa:asmbl_2930,status:3], valid-1 NODE_188_length_32872_cov_43.2989 . gene 27988 29609 . - . ID=g6282;Name=g6282.t1 NODE_188_length_32872_cov_43.2989 . mRNA 27988 29609 . - . ID=g6282.t1;Parent=g6282;Name=g6282.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 29556 29609 . - . ID=g6282.t1.utr5p1;Parent=g6282.t1 NODE_188_length_32872_cov_43.2989 . exon 29452 29609 . - . ID=g6282.t1.exon1;Parent=g6282.t1 NODE_188_length_32872_cov_43.2989 . CDS 29452 29555 . - 0 ID=cds.g6282.t1;Parent=g6282.t1 NODE_188_length_32872_cov_43.2989 . exon 27988 29327 . - . ID=g6282.t1.exon2;Parent=g6282.t1 NODE_188_length_32872_cov_43.2989 . CDS 28094 29327 . - 1 ID=cds.g6282.t1;Parent=g6282.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 27988 28093 . - . ID=g6282.t1.utr3p1;Parent=g6282.t1 #PROT g6282.t1 g6282 MSDDDDFMMDEGEEDYGLEYEDDEGSEPDVDLENQYYNSKALKDSDAREAIEGFERVLSLETEKGEWGFKALKQMVKLHFRTGKFDAMIAKYRQLLTYIKTAVTRNYSEKSINAILDYISTSQRMDLLQEFYETTLEALREAKNDRLWFKTNLKLGKLYFDRAEYNRLARILKQLHQSCTQDDGTDDLKKGTQLLEIYALEIQMYTAQKNNKRLKALYERSLRIKSAIPHPLIMGVIRECGGKMHLSEGQWEAAHTDFFEAFKNYDESGSVRRIQCLKYLVLANMLMRSEINPFDSQEAKPYKNDPEILAMTNLVSAYQHNDIREFEKILRENRSTIMDDPFIRDYIEDLLRNIRTQVLLRLIRPYTRIRLPFISRELNIPAEDVQSLLVSLILDHSVRGHIDQVNGLLVLDSASDTAGKYKAMAAWSKELAQLNAACINKMVQA* # PASA_UPDATE: g6275.t1, single gene model update, valid-1, status:[pasa:asmbl_2923,status:3], valid-1 NODE_188_length_32872_cov_43.2989 . gene 13548 14787 . + . ID=g6275;Name=g6275.t1 NODE_188_length_32872_cov_43.2989 . mRNA 13548 14787 . + . ID=g6275.t1;Parent=g6275;Name=g6275.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 13548 13732 . + . ID=g6275.t1.utr5p1;Parent=g6275.t1 NODE_188_length_32872_cov_43.2989 . exon 13548 13864 . + . ID=g6275.t1.exon1;Parent=g6275.t1 NODE_188_length_32872_cov_43.2989 . CDS 13733 13864 . + 0 ID=cds.g6275.t1;Parent=g6275.t1 NODE_188_length_32872_cov_43.2989 . exon 13967 14787 . + . ID=g6275.t1.exon2;Parent=g6275.t1 NODE_188_length_32872_cov_43.2989 . CDS 13967 14599 . + 0 ID=cds.g6275.t1;Parent=g6275.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 14600 14787 . + . ID=g6275.t1.utr3p1;Parent=g6275.t1 #PROT g6275.t1 g6275 MEQDKRVRREIANSNERRRMQSINAGFDQLKDLIPHCDGEKWSKATILQQSADYIRALQTSKGSLEDENAALRRLLCNYSQLDADSVPRTASCDMNFTKCEDMDVSDDDLSDASAAVVPGQTPPTASHMERARSASFSQPPQAPLGTFSPLACSPPVTSSGHWYGVSQHQQAQPQPPQSQFCQLPNHDTVMHLADDSRPVTDMGRHNLNTIVEAMRHLEGFEGDLSEVSGKRGRSRTNSRSRPMAMAGRKMSIS* # PASA_UPDATE: g6276.t1, single gene model update, valid-1, status:[pasa:asmbl_2928,status:3], valid-1 # PASA_UPDATE: g6276.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2927,status:3], valid-1 NODE_188_length_32872_cov_43.2989 . gene 14921 16900 . - . ID=g6276;Name=g6276.t1 NODE_188_length_32872_cov_43.2989 . mRNA 14921 16900 . - . ID=g6276.t1;Parent=g6276;Name=g6276.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 16817 16900 . - . ID=g6276.t1.utr5p1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 16710 16900 . - . ID=g6276.t1.exon1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 16710 16816 . - 0 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 16513 16610 . - . ID=g6276.t1.exon2;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 16513 16610 . - 1 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 16148 16275 . - . ID=g6276.t1.exon3;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 16148 16275 . - 2 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 15954 15984 . - . ID=g6276.t1.exon4;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 15954 15984 . - 0 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 15745 15848 . - . ID=g6276.t1.exon5;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 15745 15848 . - 2 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 15439 15622 . - . ID=g6276.t1.exon6;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 15439 15622 . - 0 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . exon 14921 15289 . - . ID=g6276.t1.exon7;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . CDS 14952 15289 . - 2 ID=cds.g6276.t1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 14921 14951 . - . ID=g6276.t1.utr3p1;Parent=g6276.t1 NODE_188_length_32872_cov_43.2989 . mRNA 14921 16900 . - . ID=g6276.t1.1.5b6be70a;Parent=g6276;Name=g6276.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 16710 16900 . - . ID=g6276.t1.1.5b6be70a.utr5p1;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . five_prime_UTR 16328 16610 . - . ID=g6276.t1.1.5b6be70a.utr5p2;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 16710 16900 . - . ID=g6276.t1.1.5b6be70a.exon1;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 16148 16610 . - . ID=g6276.t1.1.5b6be70a.exon2;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . CDS 16148 16327 . - 0 ID=cds.g6276.t1.1.5b6be70a;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 15954 15984 . - . ID=g6276.t1.1.5b6be70a.exon3;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . CDS 15954 15984 . - 0 ID=cds.g6276.t1.1.5b6be70a;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 15745 15848 . - . ID=g6276.t1.1.5b6be70a.exon4;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . CDS 15745 15848 . - 2 ID=cds.g6276.t1.1.5b6be70a;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 15439 15622 . - . ID=g6276.t1.1.5b6be70a.exon5;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . CDS 15439 15622 . - 0 ID=cds.g6276.t1.1.5b6be70a;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . exon 14921 15289 . - . ID=g6276.t1.1.5b6be70a.exon6;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . CDS 14952 15289 . - 2 ID=cds.g6276.t1.1.5b6be70a;Parent=g6276.t1.1.5b6be70a NODE_188_length_32872_cov_43.2989 . three_prime_UTR 14921 14951 . - . ID=g6276.t1.1.5b6be70a.utr3p1;Parent=g6276.t1.1.5b6be70a #PROT g6276.t1 g6276 MSQQFLKKPGSVGAFVLCVGGIYVFYLWYGILQEKITQNEYGLLRERFRYTMAIVFVQCVINALCGLAVWKITRQPENSTPILKFAFSAFTYIAAMITSNHALTYIDYPTQVLAKSCKPMPVLLLGVLINRRRYSLAKYLSVVMLSLGIALFMWKEHSGPSNSEHPHFGYGLFLLAVSLLCDGLTGPQQEQMMENYNTTAHQMMYYINACAGLMLFLFMAVSGEIGDAYDFVQRNPDIIEDATTLSLVGALGQNFIFLTVEKFGPLTCSVVTTTRKFFTILASVIVFGHVLSTRQWSGVALVFLGLSVDTFFGKKKAAKHADPHHEKQE* #PROT g6276.t1.1.5b6be70a g6276 MLHDGRTCSYALQCKMAVWKITRQPENSTPILKFAFSAFTYIAAMITSNHALTYIDYPTQVLAKSCKPMPVLLLGVLINRRRYSLAKYLSVVMLSLGIALFMWKEHSGPSNSEHPHFGYGLFLLAVSLLCDGLTGPQQEQMMENYNTTAHQMMYYINACAGLMLFLFMAVSGEIGDAYDFVQRNPDIIEDATTLSLVGALGQNFIFLTVEKFGPLTCSVVTTTRKFFTILASVIVFGHVLSTRQWSGVALVFLGLSVDTFFGKKKAAKHADPHHEKQE* # ORIGINAL: g6274.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 11013 11963 . - . ID=g6274;Name=g6274.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 11013 11963 . - . ID=g6274.t1;Parent=g6274;Name=g6274.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 11013 11963 . - . ID=g6274.t1.exon1;Parent=g6274.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 11013 11963 . - 0 ID=cds.g6274.t1;Parent=g6274.t1 #PROT g6274.t1 g6274 MQSRYERERDTWRALGYRKAIHAIQRHPRPICTKTDALSIKGIGSRLADKIVEILENGTLPRVEHNKEEDAIVEVLNGVWGAGPVTAVRWMKLGVRSIEDLRVGTIPGLDLTHAQKVGVRLYDDFKLRIPRLEVAEIEAVVLDAARSVDTSLSGHACGSYRRGKEDCGDVDVLICASRDSADTNEILDRILQELRQRGFLTDDLSRGRDGPQSKYMGACRLPGDGRLHRRLDIIVVIPSERACALVYFTGSDHLNRSMRLLAKKMGLSLSNRGLQQNVVRVGGEKVFDGIAMHTPTEESVFEALGLKYLEPHERNA* # ORIGINAL: g6272.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 6229 8206 . - . ID=g6272;Name=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 6229 8206 . - . ID=g6272.t1;Parent=g6272;Name=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 8147 8206 . - . ID=g6272.t1.exon1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 8147 8206 . - 0 ID=cds.g6272.t1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 7825 7977 . - . ID=g6272.t1.exon2;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 7825 7977 . - 0 ID=cds.g6272.t1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 7547 7654 . - . ID=g6272.t1.exon3;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 7547 7654 . - 0 ID=cds.g6272.t1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 7060 7200 . - . ID=g6272.t1.exon4;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 7060 7200 . - 0 ID=cds.g6272.t1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 6473 6566 . - . ID=g6272.t1.exon5;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 6473 6566 . - 0 ID=cds.g6272.t1;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 6229 6362 . - . ID=g6272.t1.exon6;Parent=g6272.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 6229 6362 . - 2 ID=cds.g6272.t1;Parent=g6272.t1 #PROT g6272.t1 g6272 MASDRVLYVRRRSGGGTVYHDLGNINCTFFSDRTSFVKEKSTAFVTRVLAEEHGIPAVVSPRNDVLVNGSKVSGSAYKLGSCAAYHHCTLLVNTDLTRLSGQLKPSAHGIVSQGVASVRSPVTNIASFGPTLSPSAVMDSLAMRFLSSASGGSEVAFIQSNRGLVDKFELEEAGFGLRRDLTSLQGLPYGSQKMQAELLRISREEADTGNDAEASAICDIALQVPADAP* # PASA_UPDATE: g6283.t1, single gene model update, valid-1, status:[pasa:asmbl_2926,status:3], valid-1 NODE_188_length_32872_cov_43.2989 . gene 30035 32872 . + . ID=g6283;Name=g6283.t1 NODE_188_length_32872_cov_43.2989 . mRNA 30035 32872 . + . ID=g6283.t1;Parent=g6283;Name=g6283.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 30035 30102 . + . ID=g6283.t1.utr5p1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 30035 30311 . + . ID=g6283.t1.exon1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 30103 30311 . + 0 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 30442 30800 . + . ID=g6283.t1.exon2;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 30442 30800 . + 1 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 30954 31168 . + . ID=g6283.t1.exon3;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 30954 31168 . + 2 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 31368 31605 . + . ID=g6283.t1.exon4;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 31368 31605 . + 0 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 31773 31897 . + . ID=g6283.t1.exon5;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 31773 31897 . + 2 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 32006 32074 . + . ID=g6283.t1.exon6;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 32006 32074 . + 0 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 32221 32398 . + . ID=g6283.t1.exon7;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 32221 32398 . + 0 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . exon 32499 32872 . + . ID=g6283.t1.exon8;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . CDS 32499 32671 . + 2 ID=cds.g6283.t1;Parent=g6283.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 32672 32872 . + . ID=g6283.t1.utr3p1;Parent=g6283.t1 #PROT g6283.t1 g6283 MDSGLVGQPLPLPAQVDASSFNIFQAAQRGLVDRCRYLVEFEGVDVNKADAEDVSVLHWAAINNRAALCQFLIEKGAAVDRIGGELKATPLQWAVRQGHLDTVVSLMLRGADPSIRDIQGYNSLHLAVQFGHTAVAAYLVAKGMDPDVPDNDGRTALMWACFRVFTPEMSRMLLVFHASIRIRDMSNSTALHWAACSNNRVCIELVLDSGGASLLDARNAKGQTPEEVAVEKGHAGAARRLHDAALEAAAKTLAERLQVDQTLRNRVLFYLPYVLFAIIAFVVGQFTWEGSVPLVLLALFASSQIAKRLWVYSGSNKASVAIYTASKFYVLVAFLAVIVRDEPSPFWNLLFISIASYLVFVFYKVKTVNPGFIHATEEEKRKTIIRAAEGGGDELDPSHFCSTCLIKRPIRSKHCGACNKCVAKFDHHCPFVDNCIGQWNHREFVLYLVSLIAGGVIFICLCLRYLARNSPPGASMYEKIVLYASHNTVIFWLMLYVALQMSWASGLTSIRSRSHSQPMSA* # ORIGINAL: g6270.t1 original gene structure, not modified by PASA NODE_188_length_32872_cov_43.2989 AUGUSTUS gene 1100 3146 . + . ID=g6270;Name=g6270.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS mRNA 1100 3146 . + . ID=g6270.t1;Parent=g6270;Name=g6270.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 1100 1433 . + . ID=g6270.t1.exon1;Parent=g6270.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 1100 1433 . + 0 ID=cds.g6270.t1;Parent=g6270.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS exon 1528 3146 . + . ID=g6270.t1.exon2;Parent=g6270.t1 NODE_188_length_32872_cov_43.2989 AUGUSTUS CDS 1528 3146 . + 2 ID=cds.g6270.t1;Parent=g6270.t1 #PROT g6270.t1 g6270 MPRAPRTTLPPERLAQVRQLIHDRLAASDVFSRVEEFLADFLRGRGTGEVSEAELVAALQQRGLVEDVVRSLHLDALSGIAQGSPAKGGRPAEAQAARNVHDNARDINDSKADDGADSPVRRLYVRLLTGKAFLEHVREEGSTSAATLTAHLFLRGQRFRTRAVACVCEPPFAEGFAFDMQEQDGHRLVDATALLALRDPIQLAVVRSDGDGDVSLLGHCVIDWRRALRTGGASTVAAELRGIGAESDVPVGVVDVRLELLPRMDATLPQADIDTRADWERSQANEHQRMFLVYAKQWWREFLQTRPSNASRMVRIFAEDETATNRLACTFVAPLRAGRLLDTPRHAVRFVSLLAVDRSSPIGGGAHTEQWLTLHSLLAARKGDVADHANLLCSLLIGFGLDAYVCIGTRDRGQLSSWVAVVYGDGAVVFWDPVAGQRYVHRLGDAPAHPYRTIGCAFNHRAFYANNQPSDAVDTCRFSLTNDGLWKPMSADAIASLPRLPVPPIAAPTLDAAALSADIESEMRGLLAAYRRDRGFSTAYDDDLAHLLTPALASYELERATGVRVGNEDFESVIRRAVPEGQTFKGFPIQFSHRSTRRMFAACLKSAVCGEIVDCRGDAVRHAVRVRAFAYPEDALAVWVMVAVKYRAIT* # PASA_UPDATE: g6277.t1, single gene model update, valid-1, status:[pasa:asmbl_2929,status:12], valid-1 NODE_188_length_32872_cov_43.2989 . gene 17452 18225 . - . ID=g6277;Name=g6277.t1 NODE_188_length_32872_cov_43.2989 . mRNA 17452 18225 . - . ID=g6277.t1;Parent=g6277;Name=g6277.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 18197 18225 . - . ID=g6277.t1.utr5p1;Parent=g6277.t1 NODE_188_length_32872_cov_43.2989 . exon 17647 18225 . - . ID=g6277.t1.exon1;Parent=g6277.t1 NODE_188_length_32872_cov_43.2989 . CDS 17741 18196 . - 0 ID=cds.g6277.t1;Parent=g6277.t1 NODE_188_length_32872_cov_43.2989 . exon 17452 17552 . - . ID=g6277.t1.exon2;Parent=g6277.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 17647 17740 . - . ID=g6277.t1.utr3p1;Parent=g6277.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 17452 17552 . - . ID=g6277.t1.utr3p2;Parent=g6277.t1 #PROT g6277.t1 g6277 MASIFGGLARVLRDSRPHRALRGLFGTQKIGNGLQSSFSNHKTRRTWKPNAHPNTFLSKILGEKIKTRATTNVLRWIAKAGGFDRYILTTPPSKLNSDLAMSLRTRMTAKLVREGETLPKPVRRVRKPPPSLAQAQMQDDRANITEQPQAH* # PASA_UPDATE: g6273.t1, single gene model update, valid-1, status:[pasa:asmbl_2922,status:3], valid-1 NODE_188_length_32872_cov_43.2989 . gene 9131 11701 . + . ID=g6273;Name=g6273.t1 NODE_188_length_32872_cov_43.2989 . mRNA 9131 11701 . + . ID=g6273.t1;Parent=g6273;Name=g6273.t1 NODE_188_length_32872_cov_43.2989 . five_prime_UTR 9131 9163 . + . ID=g6273.t1.utr5p1;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . exon 9131 9382 . + . ID=g6273.t1.exon1;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . CDS 9164 9382 . + 0 ID=cds.g6273.t1;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . exon 9496 9552 . + . ID=g6273.t1.exon2;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . CDS 9496 9552 . + 0 ID=cds.g6273.t1;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . exon 9687 11701 . + . ID=g6273.t1.exon3;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . CDS 9687 10679 . + 0 ID=cds.g6273.t1;Parent=g6273.t1 NODE_188_length_32872_cov_43.2989 . three_prime_UTR 10680 11701 . + . ID=g6273.t1.utr3p1;Parent=g6273.t1 #PROT g6273.t1 g6273 MFCRAPLAMGAVGAVGAAAVTAVIAVIIGLLVVLGDPVCAGAPGGRGWARVAVEEGDDDQPVAMTGHSLVSKGSQMYVYGGIINWDNGKDVKYGHVLWAFAPEDGAWERCVADRGSRRDNMRLNDSIEVVHKGMWHRGRVLAVDDSNDLVHVHIEDEQNGQAQQGSASHEAAWVPTRSVRYYPPAMNMHIAAIVGNVMYVHGGKGRTGKVTSDLWSYSFDTEAWTHMHPKKDAPAAREMHAAVALDGSVWIHGGSRGQTLFGDLFSYTPRDNTWRQVGAEHSESPWPSARWGHSAVVCGRRMCLYGGHDATQTLSEVWAFDPSTRTWQLVETQGAQPPPRKGHCAAVWSGKMYVFGGNDRAAFLDDTWALDLQSWTWVNVDVGARPPGRNFHRCGAVKGALYAFGGNNNGGLVSDLWSIELQ* # ORIGINAL: g3935.t1 original gene structure, not modified by PASA NODE_2675_length_5479_cov_43.5905 AUGUSTUS gene 76 1572 . - . ID=g3935;Name=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS mRNA 76 1572 . - . ID=g3935.t1;Parent=g3935;Name=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS exon 1557 1572 . - . ID=g3935.t1.exon1;Parent=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS CDS 1557 1572 . - 0 ID=cds.g3935.t1;Parent=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS exon 376 1385 . - . ID=g3935.t1.exon2;Parent=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS CDS 376 1385 . - 2 ID=cds.g3935.t1;Parent=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS exon 76 207 . - . ID=g3935.t1.exon3;Parent=g3935.t1 NODE_2675_length_5479_cov_43.5905 AUGUSTUS CDS 76 207 . - 0 ID=cds.g3935.t1;Parent=g3935.t1 #PROT g3935.t1 g3935 MVATKAAAKKATAVPKVAPVKAAAAPKAASPKAASPKAGPVTRKSARVSATKPKGKSPSKGDLAKSGNGSPKAQAKAEAVKASVVAAVEKTAGKKNAPAAASAPVDTKPKAAAKGKKAALAAAPESVPMEVDAPTPVAGGKKGKGKVPAAAPAKPTVSPAKPVAKADAKVVKSSKTSAGNADKPAPAETKAAAAKGKKGEKVTAVTAAAPVSPAVTETKASAAAGGKKKKGANPATPKSAVAVRGKKPKGGPRAYNSDDSADEIDEADDETPKGKGLGLGAAAKGKKKSDVVPASDSDDTDNGTEDEDADGKADKFAGMANAVALDAKTQKQLDEKLKRMPQNLDDSKPGVMYIGHIPHGFYEDQIRGFFSQFGEVTQVRVSRSKK # PASA_UPDATE: g3937.t1, single gene model update, valid-1, status:[pasa:asmbl_4776,status:12], valid-1 NODE_2675_length_5479_cov_43.5905 . gene 3486 5413 . - . ID=g3937;Name=g3937.t1 NODE_2675_length_5479_cov_43.5905 . mRNA 3486 5413 . - . ID=g3937.t1;Parent=g3937;Name=g3937.t1 NODE_2675_length_5479_cov_43.5905 . exon 3486 5413 . - . ID=g3937.t1.exon1;Parent=g3937.t1 NODE_2675_length_5479_cov_43.5905 . CDS 3725 5413 . - 0 ID=cds.g3937.t1;Parent=g3937.t1 NODE_2675_length_5479_cov_43.5905 . three_prime_UTR 3486 3724 . - . ID=g3937.t1.utr3p1;Parent=g3937.t1 #PROT g3937.t1 g3937 MQGAPRNARLLKRIVDTIESGPLSMSEQLKALQANIAVWTQRLAPQAAGAPSGAVGPAAGDAAQGSSAFDSILSAILPQNAPFRRQQSFLGSVASIQHQVPPSAGASGVVGSVSLDGERLAQCEFYISAYGSEAQLVEFFVKHGLIDRACAHVMGRSLSADVFVECVLRPCLAQGSLAGIKSAIREADPDLHLWHGHLLAACRYISRAGMLHVLYDLQLFMRDHVRAGSSCIKFFARTARPVEGVDHLERARLHFEQALSEQSFSSGDDAPVLQGGDAASASSGPSASSASASASGLGDGRRNSAVSLRRGAPGRRTAQTAIEVATSLRRVNLQLDVLRSMNADVPSEDGGGGESVPPVATPTTRATMPAADTSAAAAAAAAAGGATPGFTDGVIEVDGQPATLFGSDAMRVAIATHLLVRLQCELAARVTAEYGLAAPELYRQCADILAGRRLMRRLTDMLTDARARLSQRDSEDVICHAIGELAEKLGEAKAAEKLVPLLTTDEAKIRACVMCGKLKSAYLTAVKGGYAAQVRMIGAAAAKTGQKMVQDLCDKWLAAQPQ* # PASA_UPDATE: g3936.t1, single gene model update, valid-1, status:[pasa:asmbl_4777,status:12], valid-1 NODE_2675_length_5479_cov_43.5905 . gene 1940 3457 . + . ID=g3936;Name=g3936.t1 NODE_2675_length_5479_cov_43.5905 . mRNA 1940 3457 . + . ID=g3936.t1;Parent=g3936;Name=g3936.t1 NODE_2675_length_5479_cov_43.5905 . five_prime_UTR 1940 1997 . + . ID=g3936.t1.utr5p1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . exon 1940 2142 . + . ID=g3936.t1.exon1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . CDS 1998 2142 . + 0 ID=cds.g3936.t1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . exon 2287 2623 . + . ID=g3936.t1.exon2;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . CDS 2287 2623 . + 2 ID=cds.g3936.t1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . exon 2813 2957 . + . ID=g3936.t1.exon3;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . CDS 2813 2957 . + 1 ID=cds.g3936.t1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . exon 3216 3457 . + . ID=g3936.t1.exon4;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . CDS 3216 3308 . + 0 ID=cds.g3936.t1;Parent=g3936.t1 NODE_2675_length_5479_cov_43.5905 . three_prime_UTR 3309 3457 . + . ID=g3936.t1.utr3p1;Parent=g3936.t1 #PROT g3936.t1 g3936 MKSFIRAFSRSSKMASANESRRDMYACGKNFKTLADIPTWAQNGSPRKDADPQPLFPVRTDLNEKVSLWRGDITQLEIDAIVNAANEHCTGGGGIDGAIHRAAGNGLYKECVKLNGCPRGQAKITGGHKLPARHVIHTVGPIFNNSRAEECDGILKSAYGRSLAVAMENGCRSVALCCISTGVYGFPNQPAAHIALKEVRSVLEEHADKFDRIIFCLFLEIDVSIYNRLLPLYFPHAQQ* # ORIGINAL: g7491.t1 original gene structure, not modified by PASA NODE_2839_length_5005_cov_41.118 AUGUSTUS gene 2023 2637 . - . ID=g7491;Name=g7491.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS mRNA 2023 2637 . - . ID=g7491.t1;Parent=g7491;Name=g7491.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS exon 2023 2637 . - . ID=g7491.t1.exon1;Parent=g7491.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS CDS 2023 2637 . - 0 ID=cds.g7491.t1;Parent=g7491.t1 #PROT g7491.t1 g7491 MHRPTTTSQPVLSCELQWRSLSRDGPSLLNLACRRSHGHCVGTVCGMARAVAVVASLTLILSTASLSVSAQATCEVRTTDSNDLVLSSADGRSIALKNANTIDLDTPELLIRVSPGGVKMPLHNILETLSKADTSQQSVAITLQSTVSGVQSAVQNLQTDFNGLQTSVAKQIQAPMTGIQANFTDLSIQVGAQYCYFYVSDRRQ* # PASA_UPDATE: g7492.t1, single gene model update, valid-1, status:[pasa:asmbl_5098,status:12], valid-1 NODE_2839_length_5005_cov_41.118 . gene 3105 4891 . - . ID=g7492;Name=g7492.t1 NODE_2839_length_5005_cov_41.118 . mRNA 3105 4891 . - . ID=g7492.t1;Parent=g7492;Name=g7492.t1 NODE_2839_length_5005_cov_41.118 . exon 4133 4891 . - . ID=g7492.t1.exon1;Parent=g7492.t1 NODE_2839_length_5005_cov_41.118 . CDS 4133 4891 . - 0 ID=cds.g7492.t1;Parent=g7492.t1 NODE_2839_length_5005_cov_41.118 . exon 3105 3642 . - . ID=g7492.t1.exon2;Parent=g7492.t1 NODE_2839_length_5005_cov_41.118 . CDS 3271 3642 . - 0 ID=cds.g7492.t1;Parent=g7492.t1 NODE_2839_length_5005_cov_41.118 . three_prime_UTR 3105 3270 . - . ID=g7492.t1.utr3p1;Parent=g7492.t1 #PROT g7492.t1 g7492 MHIAPHHQVPSGGDWSVHRGAALFIEGTESVTVTGNVFNATGGNAIFLSNYNRGAVVARNEFFLVGDSAVVAVGSVMLNDGTGGNQPRGSLIEGNLIHDIGVFGKQVCGFIQSLACQTIVRNNIIFNGPRAGITLNDGFGGGNVLEGNLLFNLVRETTDHGPINTWDRVPYLHDLNGRGVGVTMMPLMSYITGNFVINNYQGTWAIDHDDGSMYYYDSKNVLVYGPSKCYLGHHQTVVDNFYFIADTTFPGKLSYRPYCIDTGADTDEDTSGFSNVWERNKCFLNDSHPVSQYHYPCNEVDTRGLIPFTAGNTFYTRASADPLIVSTCDTAVWDLNAANMWGYEIGSTSEVMPDSAAGPTIVRMLREFIGLDRPRT* # ORIGINAL: g7490.t1 original gene structure, not modified by PASA NODE_2839_length_5005_cov_41.118 AUGUSTUS gene 212 454 . + . ID=g7490;Name=g7490.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS mRNA 212 454 . + . ID=g7490.t1;Parent=g7490;Name=g7490.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS exon 212 454 . + . ID=g7490.t1.exon1;Parent=g7490.t1 NODE_2839_length_5005_cov_41.118 AUGUSTUS CDS 212 454 . + 0 ID=cds.g7490.t1;Parent=g7490.t1 #PROT g7490.t1 g7490 MHDGAIICGDGDGAGDAVLKDKRDLFCDPSSAVYHNALYKPAAALDSSVSMALLQQPLLDNGDAPSQQASTDTLHTHTDA* # ORIGINAL: g6033.t1 original gene structure, not modified by PASA NODE_2818_length_5066_cov_34.9211 AUGUSTUS gene 154 4848 . - . ID=g6033;Name=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS mRNA 154 4848 . - . ID=g6033.t1;Parent=g6033;Name=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 4827 4848 . - . ID=g6033.t1.exon1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 4827 4848 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 4566 4699 . - . ID=g6033.t1.exon2;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 4566 4699 . - 2 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 4117 4155 . - . ID=g6033.t1.exon3;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 4117 4155 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 3917 3948 . - . ID=g6033.t1.exon4;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 3917 3948 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 3685 3742 . - . ID=g6033.t1.exon5;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 3685 3742 . - 1 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 3323 3445 . - . ID=g6033.t1.exon6;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 3323 3445 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 3038 3124 . - . ID=g6033.t1.exon7;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 3038 3124 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 2634 2738 . - . ID=g6033.t1.exon8;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 2634 2738 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 2154 2234 . - . ID=g6033.t1.exon9;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 2154 2234 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 1824 1940 . - . ID=g6033.t1.exon10;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 1824 1940 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 1558 1637 . - . ID=g6033.t1.exon11;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 1558 1637 . - 0 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 1052 1218 . - . ID=g6033.t1.exon12;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 1052 1218 . - 1 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 466 708 . - . ID=g6033.t1.exon13;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 466 708 . - 2 ID=cds.g6033.t1;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS exon 154 241 . - . ID=g6033.t1.exon14;Parent=g6033.t1 NODE_2818_length_5066_cov_34.9211 AUGUSTUS CDS 154 241 . - 2 ID=cds.g6033.t1;Parent=g6033.t1 #PROT g6033.t1 g6033 MSRYSTLHPLPKQDLIGIPDFQSGALEDWGSILFRETSFLIDPAVSSQSDLQNVALTVCHELVHQWFGNLVTMNWWNDLWLNEGFASFLEWYGVQNRFPEWQVPELFYADPITNALEADSLTASHPITANVTDPAQINILFDSITYDKGATVLHMLSNFLTVSGSGTALSTALHNYLTNFMYGTALTADLWAYISAASGKDIKTIMSSWTDITGYPVVTFIKKEIEGYTSGTEMSAKDAQSLWWIPLDYVTDANPTTIVSAPIELSATSPAIPYPTSTTGWVKFNVGQHSLYRVNYEAEIWARLQGAAALKVLAPLDRAGLVSDSLSLLRTGDLAAETAFEFVFFAKQDNSYAVWAALLGKLSVFEVLLRSQLTGAAPTCYNNFTAYVQSMVEPALYMLGGVNSTRQLSHPEALLRSALVAAAVFYNDPDTIALCRQMYLDSQASGVDIAADIRSAVY # PASA_UPDATE: g253.t1, single gene model update, valid-1, status:[pasa:asmbl_1656,status:12], valid-1 NODE_1456_length_11191_cov_41.5023 . gene 10236 10962 . + . ID=g253;Name=g253.t1 NODE_1456_length_11191_cov_41.5023 . mRNA 10236 10962 . + . ID=g253.t1;Parent=g253;Name=g253.t1 NODE_1456_length_11191_cov_41.5023 . five_prime_UTR 10236 10306 . + . ID=g253.t1.utr5p1;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . exon 10236 10338 . + . ID=g253.t1.exon1;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . CDS 10307 10338 . + 0 ID=cds.g253.t1;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . exon 10488 10510 . + . ID=g253.t1.exon2;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . CDS 10488 10510 . + 1 ID=cds.g253.t1;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . exon 10836 10962 . + . ID=g253.t1.exon3;Parent=g253.t1 NODE_1456_length_11191_cov_41.5023 . CDS 10836 10962 . + 2 ID=cds.g253.t1;Parent=g253.t1;3_prime_partial=true #PROT g253.t1 g253 MSKAPNPELKKYMDKKVALTLNGNRHVTGVLRGFDPFMNIVLDEAVEEASPTEKNAIGMV # ORIGINAL: g251.t1 original gene structure, not modified by PASA NODE_1456_length_11191_cov_41.5023 AUGUSTUS gene 1388 4494 . - . ID=g251;Name=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS mRNA 1388 4494 . - . ID=g251.t1;Parent=g251;Name=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS exon 3130 4494 . - . ID=g251.t1.exon1;Parent=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS CDS 3130 4494 . - 0 ID=cds.g251.t1;Parent=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS exon 2780 2896 . - . ID=g251.t1.exon2;Parent=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS CDS 2780 2896 . - 0 ID=cds.g251.t1;Parent=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS exon 1388 2527 . - . ID=g251.t1.exon3;Parent=g251.t1 NODE_1456_length_11191_cov_41.5023 AUGUSTUS CDS 1388 2527 . - 0 ID=cds.g251.t1;Parent=g251.t1 #PROT g251.t1 g251 MASRKDSAETPLRAARPRRNTRYDLGTANLTHSWAAFLSSKYVYEDFKAGMTVALTAIPFSLAIALASNAPANSGMISAVIGGIVCSLFGGTKLGVTGPAMGMSMTVNAIVSTMGYETLLYATLVAGILQVVTGVLELGVFVRLVPIPVTLGVTSAVSAVIVLGQLPRAIGLPPANAQHLLDAVTDIYNNLHNADGASLCLFLLAFVLALIPPFWMKTPSKHPIPILAIAVPTVVAHVCGLTVDRVGALNNRFPAPRFPNLPDSIGPNDYYSVAGAVVSVFAMASLESLLSASAVDRMASIKPHDPNQELIGQGLANIVVSVVGGIPVTGIAVRSALNVEAGARTRRATIFQALAVLFVFLFFGSFLALVPTAAVAGVLVSFAHRLLLMPQLVALWKDSVGDALVYTITFCSVLWLDLVGGVQAGMVAATIIAGVRLGQVKIMITASGDKQSPVEATFSGALTFMSSRMMDRLRKDIVHQTISNGVIFNVTDVKGADKTGAELLVQFAEELIGRGARVVILGQRDQVRRRLKTECHARLLSKVVRFACSYSEAIAQLEEGGNNGGRKSFAKERLVRGFAKFRGDMHGRYAKLFKNLSTGQKPHTLFVTCSDSRIVPELLTQTDPGELFIMRNVGGRIPPSGHNTRSEGAGVEYAVGVLGVRQIIVCGHSGCGAIQFLLNLKKEATPNLPNVMDWMNDARPFVDSLGDDVHDVDEVAKRKVVHQLLNLTTYSVVTTAIAQGGLKLSAWFFDVGRGELLEWDGNRAKFTSLVANTLHSPVTLEDSPFGSNLTTPASVRRTSGGFTARHVHDDACGCETIDHDDSEDMRGRSGSASSLRRRRVDVPSFSRNTSMQVTTDDENMSRNRSGSDLVVRE* # PASA_UPDATE: g252.t1, single gene model update, valid-1, status:[pasa:asmbl_1652,status:12],[pasa:asmbl_1654,status:12], valid-1 NODE_1456_length_11191_cov_41.5023 . gene 5283 9664 . - . ID=g252;Name=g252.t1 NODE_1456_length_11191_cov_41.5023 . mRNA 5283 9664 . - . ID=g252.t1;Parent=g252;Name=g252.t1 NODE_1456_length_11191_cov_41.5023 . five_prime_UTR 9614 9664 . - . ID=g252.t1.utr5p1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . five_prime_UTR 9456 9496 . - . ID=g252.t1.utr5p2;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 9614 9664 . - . ID=g252.t1.exon1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 9456 9496 . - . ID=g252.t1.exon2;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 9231 9315 . - . ID=g252.t1.exon3;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 9231 9315 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 8863 8980 . - . ID=g252.t1.exon4;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 8863 8980 . - 2 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 8579 8633 . - . ID=g252.t1.exon5;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 8579 8633 . - 1 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 8053 8204 . - . ID=g252.t1.exon6;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 8053 8204 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 7717 7840 . - . ID=g252.t1.exon7;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 7717 7840 . - 1 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 7525 7605 . - . ID=g252.t1.exon8;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 7525 7605 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 7153 7264 . - . ID=g252.t1.exon9;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 7153 7264 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 6833 6963 . - . ID=g252.t1.exon10;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 6833 6963 . - 2 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 6588 6656 . - . ID=g252.t1.exon11;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 6588 6656 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 6090 6287 . - . ID=g252.t1.exon12;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 6090 6287 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . exon 5283 5838 . - . ID=g252.t1.exon13;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . CDS 5626 5838 . - 0 ID=cds.g252.t1;Parent=g252.t1 NODE_1456_length_11191_cov_41.5023 . three_prime_UTR 5283 5625 . - . ID=g252.t1.utr3p1;Parent=g252.t1 #PROT g252.t1 g252 MMDYDDDEPAVATIRARADSDVPVDTPKGNVSAAIRDRITSVKLNDDEAANARRSVIDFGESGDLIISLSGAEKHGDGMDAYVSYQVTTKTTMAVFGSSEFFVRRRYQDFVWLRQKLHKDYLDVLVPPLPAKKSIDRFNAEFLEKRRIYLERFLRRVALHPKLRNAPDFHTFLEAKKWALDTAKKDQGGMFSGLADSISKVSFAKNKNPDERFVNLRNSMNTLCENLTAIEKVGTKVKKHQEDISTDVAELGPICQLLSNAETELCEVFSTTGKQQEQLSTLIKETAESVDAKFYDPVREYILFCEAAQELLKNHDVVESQYLAAKADLEKKENERTSVSNSDGRKGLGGFFGGGKHPETAKQERLDKLATVIKEAEDAVATKEKALKEHDHEVLKEFEYFGKGKVADMKHVLLDHANIQIEFHRKALALWEELIPQIEKVKPSE* # ORIGINAL: g13700.t1 original gene structure, not modified by PASA NODE_505_length_22173_cov_40.925 AUGUSTUS gene 14696 16363 . + . ID=g13700;Name=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS mRNA 14696 16363 . + . ID=g13700.t1;Parent=g13700;Name=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 14696 14771 . + . ID=g13700.t1.exon1;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 14696 14771 . + 0 ID=cds.g13700.t1;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 14982 15058 . + . ID=g13700.t1.exon2;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 14982 15058 . + 2 ID=cds.g13700.t1;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 15433 15525 . + . ID=g13700.t1.exon3;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 15433 15525 . + 0 ID=cds.g13700.t1;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 15738 15896 . + . ID=g13700.t1.exon4;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 15738 15896 . + 0 ID=cds.g13700.t1;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 16292 16363 . + . ID=g13700.t1.exon5;Parent=g13700.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 16292 16363 . + 0 ID=cds.g13700.t1;Parent=g13700.t1 #PROT g13700.t1 g13700 MSEYNDIQLEFKDKSKERIRRQYKIAKPDASEEEIENAMGSTQNGNIFAKQVMSTSLVEARKALEDAQDRQKDLEKLEEGLRELHALFLDMAMIISAHGKMVDSIADSVEQAAEYVEEGAEQTQVAHKEQKKFRKKKIAIAVACLVLLLILVLALALR* # ORIGINAL: g13701.t1 original gene structure, not modified by PASA NODE_505_length_22173_cov_40.925 AUGUSTUS gene 16722 19611 . + . ID=g13701;Name=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS mRNA 16722 19611 . + . ID=g13701.t1;Parent=g13701;Name=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 16722 17344 . + . ID=g13701.t1.exon1;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 16722 17344 . + 0 ID=cds.g13701.t1;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 17674 18080 . + . ID=g13701.t1.exon2;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 17674 18080 . + 1 ID=cds.g13701.t1;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 18391 18704 . + . ID=g13701.t1.exon3;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 18391 18704 . + 2 ID=cds.g13701.t1;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 19024 19611 . + . ID=g13701.t1.exon4;Parent=g13701.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 19024 19611 . + 0 ID=cds.g13701.t1;Parent=g13701.t1 #PROT g13701.t1 g13701 MFPCESISTTNLFALRRHRGVVDAAMFCILFACILVHPTHVFAAHDGGDSAINTPPSTLSVGAESNFNPDSENLSRAFGSKAIYPSHAGTHAPQLPRAEWECQPVAIDMVLRHGTRYPSTGDIKKMAKLGAALSIVGDSISNPSFEWLKDWKSPFTLEDDKKLAPRGMRELYGIARRLKRRFPSLLGRPYSPGLFDFTSTASTRCSQSAASFAFGLFEGEGVLGESRFQPISVVSESLHTDHVLRFFDACEDYMVRVYNNDTANEQRRKFKEGLVIASVADGIARTLGTPSWKPSPGEVIAFHLACAFEIAIHGTDKMCGVFEKEADVLAVEYLGDLKHYWLRGHGDAINYKSSCPLLGTMFHSLRRAANGTDNAIARFRFAHAETLLPMLSLLGLYKEIGHLTADDYGPHRHGRSFRASDIVPFAANVGLVLWECPKGVAPHRVSLLVNEREVHIPGCTELHCKFDEFSAIYRDLTGTDHVCDLHSLCVAKQAEEDVAELLEEERLPLHESELRAAAEAAEQTKRDAVAKVIAEEEIKAKREAVAVASASSVEKHAAAKKNTQEKGKRATKGHGEHADGGSETAFKNGKTPSHGNGKNEKRGERACAKKSGCGTKTDGREAKGEDTSGTKVWAGTKRGKKTV* # ORIGINAL: g13698.t1 original gene structure, not modified by PASA NODE_505_length_22173_cov_40.925 AUGUSTUS gene 4589 6545 . + . ID=g13698;Name=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS mRNA 4589 6545 . + . ID=g13698.t1;Parent=g13698;Name=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 4589 4844 . + . ID=g13698.t1.exon1;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 4589 4844 . + 0 ID=cds.g13698.t1;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 5059 5426 . + . ID=g13698.t1.exon2;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 5059 5426 . + 2 ID=cds.g13698.t1;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 5688 5730 . + . ID=g13698.t1.exon3;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 5688 5730 . + 0 ID=cds.g13698.t1;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 6097 6545 . + . ID=g13698.t1.exon4;Parent=g13698.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 6097 6545 . + 2 ID=cds.g13698.t1;Parent=g13698.t1 #PROT g13698.t1 g13698 MAGPLRDLSVLDESPDDFLHFLDDLTARDASTQSPSRGTVAVEPVLRSDAPWPVIPGTEAGGSSTHEATADGYRRGKRRNSPSANDQPKTRPYISDAGAGASSIPPAAIIDLTSSDDASVILPPPPVPARQHTTPSSPSDLPVIVAEIAAPNANRALAHNFAAHNINNRGPAALPGLLDLTTTMTNTAHRTVPHAPLRRPFMGAHGSGPPHQPHMRVLDFSQPYGIRGSFLLDQLLEGMGMGFHHGHHMMHGHNGRDGPSVYDDPPTPPPIPENIRKANEEHGLSSLPKAAAASQGDASASADADKGESDGNGGPKAFTCSVCRDSATDISATTCGHVFCGDCIRTAVRLTHKCPICRTKLTMKQVHRLFI* # PASA_UPDATE: g13696.t1, single gene model update, valid-1, status:[pasa:asmbl_7832,status:12], valid-1 NODE_505_length_22173_cov_40.925 . gene 145 1025 . + . ID=g13696;Name=g13696.t1 NODE_505_length_22173_cov_40.925 . mRNA 145 1025 . + . ID=g13696.t1;Parent=g13696;Name=g13696.t1 NODE_505_length_22173_cov_40.925 . exon 145 242 . + . ID=g13696.t1.exon1;Parent=g13696.t1 NODE_505_length_22173_cov_40.925 . CDS 145 242 . + 0 ID=cds.g13696.t1;Parent=g13696.t1;5_prime_partial=true NODE_505_length_22173_cov_40.925 . exon 503 624 . + . ID=g13696.t1.exon2;Parent=g13696.t1 NODE_505_length_22173_cov_40.925 . CDS 503 624 . + 1 ID=cds.g13696.t1;Parent=g13696.t1 NODE_505_length_22173_cov_40.925 . exon 737 1025 . + . ID=g13696.t1.exon3;Parent=g13696.t1 NODE_505_length_22173_cov_40.925 . CDS 737 936 . + 2 ID=cds.g13696.t1;Parent=g13696.t1 NODE_505_length_22173_cov_40.925 . three_prime_UTR 937 1025 . + . ID=g13696.t1.utr3p1;Parent=g13696.t1 #PROT g13696.t1 g13696 AALPELRKSKGRIINVSSGAATKAYVAWGAYCVSKAGLNMLTECVAAEEPDVIAVSLRPGIVETDMQGEVRSKGTGNMDAGTHQYLSNAYATGTLVQPSVPGEVIARMSVDAALGKEWSGRFFSYDDADVLSYLKQFAQ* # PASA_UPDATE: g13697.t1, single gene model update, valid-1, status:[pasa:asmbl_7830,status:12], valid-1 NODE_505_length_22173_cov_40.925 . gene 1361 4054 . - . ID=g13697;Name=g13697.t1 NODE_505_length_22173_cov_40.925 . mRNA 1361 4054 . - . ID=g13697.t1;Parent=g13697;Name=g13697.t1 NODE_505_length_22173_cov_40.925 . five_prime_UTR 3998 4054 . - . ID=g13697.t1.utr5p1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 3914 4054 . - . ID=g13697.t1.exon1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 3914 3997 . - 0 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 3647 3739 . - . ID=g13697.t1.exon2;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 3647 3739 . - 0 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 3200 3296 . - . ID=g13697.t1.exon3;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 3200 3296 . - 0 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 2682 2769 . - . ID=g13697.t1.exon4;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 2682 2769 . - 2 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 2393 2445 . - . ID=g13697.t1.exon5;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 2393 2445 . - 1 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 2076 2184 . - . ID=g13697.t1.exon6;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 2076 2184 . - 2 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 1670 1753 . - . ID=g13697.t1.exon7;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 1670 1753 . - 1 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . exon 1361 1534 . - . ID=g13697.t1.exon8;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . CDS 1438 1534 . - 1 ID=cds.g13697.t1;Parent=g13697.t1 NODE_505_length_22173_cov_40.925 . three_prime_UTR 1361 1437 . - . ID=g13697.t1.utr3p1;Parent=g13697.t1 #PROT g13697.t1 g13697 MAAHHVVIYGGRGALGSSVVTLFKSKNWNVTSIDLVANDEANANIVLGVNDSFEDQAKAVETGLSGIVKDGKVDAVLCVAGGWAGGNAASADLIKNTELMIKQSVWTSVISAQIASRFLAPGGFLALTGALAAINATPGMIGYGLAKGAVHQLVKSLAEPAGGLPENASVLAILPVTIDTPMNRKFMPDADFGTWTSREEIASKLFSWSSKESVAPNGALVHVVTKGGVTTYSS* # ORIGINAL: g13699.t1 original gene structure, not modified by PASA NODE_505_length_22173_cov_40.925 AUGUSTUS gene 7419 12336 . - . ID=g13699;Name=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS mRNA 7419 12336 . - . ID=g13699.t1;Parent=g13699;Name=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 11092 12336 . - . ID=g13699.t1.exon1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 11092 12336 . - 0 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 10108 10856 . - . ID=g13699.t1.exon2;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 10108 10856 . - 0 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 9677 9771 . - . ID=g13699.t1.exon3;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 9677 9771 . - 1 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 9225 9305 . - . ID=g13699.t1.exon4;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 9225 9305 . - 2 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 8719 8852 . - . ID=g13699.t1.exon5;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 8719 8852 . - 2 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 8460 8544 . - . ID=g13699.t1.exon6;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 8460 8544 . - 0 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 8118 8262 . - . ID=g13699.t1.exon7;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 8118 8262 . - 2 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 7718 7903 . - . ID=g13699.t1.exon8;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 7718 7903 . - 1 ID=cds.g13699.t1;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS exon 7419 7584 . - . ID=g13699.t1.exon9;Parent=g13699.t1 NODE_505_length_22173_cov_40.925 AUGUSTUS CDS 7419 7584 . - 1 ID=cds.g13699.t1;Parent=g13699.t1 #PROT g13699.t1 g13699 MATLHDALELVALEHETSEYSRASASTHRLCAQLRERRQLLAQKQAVRQRREMQIDQHRSSVWMQHVRDVALAERAARKRNAFVRAEFDSVQELLDAYGAGYRRDAMRMERHAASRVAGASGMGLEAYPSDVVPPEEGPVATSAATQGARRMEELDAQLREIRERMRDRLAAHAQSTLALRDDDDVGSESPRSAFERLDDDRMHQDHTIQPSTVGLPHARTTYAQSATSNYSPAAERDVTTLASAKDEGGDARSAMVSRQTSRDATETDARSQAGGAPMSLANAATSAGASFASERDRSEGIATTTAGGSVMRPPGGVSVLPPFPTSNTIGVAPSSLGGSARLGTSATAERPHVESALTAILGKTGGSVGGAPSGPGKGAVETRGVADEYMDGDEDDGDDVLLEDVTRQPIGMPLSHSASMLSISSQGSSRPVSRDVGGPLLQPPKQPTQIQQPQPQQQQQSVPQSQLQTQTQSRQLAGGLASSSASIPASEKQLPQGSSSTVPPSASLVNATTTRTPSATAAQPSNAGLPKAQSASSSGVAPVPAPLTTNVAGVAKVGGSPAPTAAPVLKSPSLVAVGKGEPKKHDSDGSDDEDYGMRSDDDFRELSALPTDASGTTPVITSRAPLSPKAFAMLLRAVEDAVQEDAASLYRRPCDDSVHQQIVKMASSGQNLGVWDPEFVSHVVKEELVFFSADGAIVPAEFLDGNPITNEDIVQNLAGDGVEYWPLLVLHWQRLVSHRLMDADDIAAVFGPLLLPEGTDSPTNVAVLSDLIVALATDPATKKPSFGEKSSPAHRSSVVPAISDDEELSISFTEQSDRKAPPAIKPTPAPAVPPPTAQAAASKKPPPVHHTERDNLSESTDTLSNMSGGKESQLSASKDLASKDLSSEGRKPAHLERFRSVPANLGTTKPPPPVTRRASGSAILSKHLGLLDSDSEPEGDFGGEIDESGVNKSDNSEFSF* # PASA_UPDATE: g13702.t1, single gene model update, valid-1, status:[pasa:asmbl_7831,status:3], valid-1 NODE_505_length_22173_cov_40.925 . gene 20054 21990 . - . ID=g13702;Name=g13702.t1 NODE_505_length_22173_cov_40.925 . mRNA 20054 21990 . - . ID=g13702.t1;Parent=g13702;Name=g13702.t1 NODE_505_length_22173_cov_40.925 . five_prime_UTR 21864 21990 . - . ID=g13702.t1.utr5p1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . exon 21861 21990 . - . ID=g13702.t1.exon1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . CDS 21861 21863 . - 0 ID=cds.g13702.t1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . exon 21509 21713 . - . ID=g13702.t1.exon2;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . CDS 21509 21713 . - 0 ID=cds.g13702.t1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . exon 21299 21354 . - . ID=g13702.t1.exon3;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . CDS 21299 21354 . - 2 ID=cds.g13702.t1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . exon 20870 21019 . - . ID=g13702.t1.exon4;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . CDS 20870 21019 . - 0 ID=cds.g13702.t1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . exon 20054 20689 . - . ID=g13702.t1.exon5;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . CDS 20549 20689 . - 0 ID=cds.g13702.t1;Parent=g13702.t1 NODE_505_length_22173_cov_40.925 . three_prime_UTR 20054 20548 . - . ID=g13702.t1.utr3p1;Parent=g13702.t1 #PROT g13702.t1 g13702 MGLLDTLRSWRTKKNKEVRILLLGLDNAGKTTILKKLASEDISLITPTHGFNIKSVASQGFKLNVWDIGGQKVLRPYWRHYFERTDALIYVVDSGDKKRFEESGQELGVLLDEEKLKGVPVLVFANKQDLVNAVKADEIAVGLNLHAIRGRMWQIQGCSALRGEGLEEGMAWCCKAIDKAQSKK* # PASA_UPDATE: g1075.t1, single gene model update, valid-1, status:[pasa:asmbl_2526,status:12],[pasa:asmbl_2527,status:12], valid-1 NODE_1755_length_9369_cov_43.929 . gene 3279 5999 . + . ID=g1075;Name=g1075.t1 NODE_1755_length_9369_cov_43.929 . mRNA 3279 5999 . + . ID=g1075.t1;Parent=g1075;Name=g1075.t1 NODE_1755_length_9369_cov_43.929 . exon 3279 4631 . + . ID=g1075.t1.exon1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . CDS 3279 4631 . + 0 ID=cds.g1075.t1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . exon 4726 4932 . + . ID=g1075.t1.exon2;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . CDS 4726 4932 . + 0 ID=cds.g1075.t1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . exon 5029 5325 . + . ID=g1075.t1.exon3;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . CDS 5029 5325 . + 0 ID=cds.g1075.t1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . exon 5427 5624 . + . ID=g1075.t1.exon4;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . CDS 5427 5624 . + 0 ID=cds.g1075.t1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . exon 5704 5999 . + . ID=g1075.t1.exon5;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . CDS 5704 5931 . + 0 ID=cds.g1075.t1;Parent=g1075.t1 NODE_1755_length_9369_cov_43.929 . three_prime_UTR 5932 5999 . + . ID=g1075.t1.utr3p1;Parent=g1075.t1 #PROT g1075.t1 g1075 MAKARTQATAVGHNPRSKAGSLSRRESTEIATVTDAVAALNPNTPLATDRFADLPLSTRTLKGLEKAGFVAMTDVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPILEKLWRLKWSPSDGIGAIIVSPTRELAFQTFEVLRKVGCEHDLSAGLVIGGKDVEAEKERILRMNILICTPGRLLQHMDETVGFDCTSLQALVLDEADRILDLGFASTLEAIVANLPSERQTMLFSATQTKSVKDLARLSLENPEYVAVHEHARFSTPSRLSQSYVVCELHEKLDVLYSFIRTHTNQKTIVFLSSCKQVRFVHESLCRLRPGVPLLALYGKQKQMKRMAIYADFARKSSAVLFATDIAARGLDFPAVHWVVQVDCPEDEDTYIHRAGRTARYENDGNALILLLPSEEKGMIAALEAKRIPVKKIAVNPAKTLSIRSKLETFCTQDPEYKYLAQKCFVSYMRSVFLQKRKDIFDVHALPADEYARSLGLPGAPRIRFVKKAEKKHGPSEDGDADGVKNDENTSTKPAGGKSKVDRIRSRQNRDVLSEAWAKLRASSDESSGDEDGGGGDLLIVSRKDHELSASDDDMLDAEKQAVITRARIAKKLIKKNVVVNTKITFDDDGEVLEPTPEEESAAPGGIDLNAAKRRMMDEDRKDRRTERERIKLRHREKRLKEREERKKQMGQGDDDMMVTLGGDLDEDEEHQQGRDDEGDSDSAREESPLPTPSARKRTASRDDERPSKRQKGSATRSLEEDERIALELLAG* # PASA_UPDATE: g1074.t1, single gene model update, valid-1, status:[pasa:asmbl_2528,status:12], valid-1 NODE_1755_length_9369_cov_43.929 . gene 1749 2968 . - . ID=g1074;Name=g1074.t1 NODE_1755_length_9369_cov_43.929 . mRNA 1749 2968 . - . ID=g1074.t1;Parent=g1074;Name=g1074.t1 NODE_1755_length_9369_cov_43.929 . five_prime_UTR 2915 2968 . - . ID=g1074.t1.utr5p1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . exon 2912 2968 . - . ID=g1074.t1.exon1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . CDS 2912 2914 . - 0 ID=cds.g1074.t1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . exon 2500 2628 . - . ID=g1074.t1.exon2;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . CDS 2500 2628 . - 0 ID=cds.g1074.t1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . exon 2300 2382 . - . ID=g1074.t1.exon3;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . CDS 2300 2382 . - 0 ID=cds.g1074.t1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . exon 1749 1881 . - . ID=g1074.t1.exon4;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . CDS 1818 1881 . - 1 ID=cds.g1074.t1;Parent=g1074.t1 NODE_1755_length_9369_cov_43.929 . three_prime_UTR 1749 1817 . - . ID=g1074.t1.utr3p1;Parent=g1074.t1 #PROT g1074.t1 g1074 MAKRTKKVGVVGKYGTRYGASLRKMVKKMEITQHAKYTCMFCGKDSVRRTAVGIWNCRGCHKTVAGGAWTVSTTAAVTVRSNIRRLREMKEN* # PASA_UPDATE: g1076.t1, single gene model update, valid-1, status:[pasa:asmbl_2529,status:12], valid-1 NODE_1755_length_9369_cov_43.929 . gene 6133 9347 . - . ID=g1076;Name=g1076.t1 NODE_1755_length_9369_cov_43.929 . mRNA 6133 9347 . - . ID=g1076.t1;Parent=g1076;Name=g1076.t1 NODE_1755_length_9369_cov_43.929 . five_prime_UTR 9338 9347 . - . ID=g1076.t1.utr5p1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 9074 9347 . - . ID=g1076.t1.exon1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 9074 9337 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 8678 8814 . - . ID=g1076.t1.exon2;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 8678 8814 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 8447 8568 . - . ID=g1076.t1.exon3;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 8447 8568 . - 1 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 8261 8350 . - . ID=g1076.t1.exon4;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 8261 8350 . - 2 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 8046 8121 . - . ID=g1076.t1.exon5;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 8046 8121 . - 2 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 7779 7974 . - . ID=g1076.t1.exon6;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 7779 7974 . - 1 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 7601 7687 . - . ID=g1076.t1.exon7;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 7601 7687 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 7373 7522 . - . ID=g1076.t1.exon8;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 7373 7522 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 7174 7302 . - . ID=g1076.t1.exon9;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 7174 7302 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 6985 7080 . - . ID=g1076.t1.exon10;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 6985 7080 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 6748 6879 . - . ID=g1076.t1.exon11;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 6748 6879 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 6572 6667 . - . ID=g1076.t1.exon12;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 6572 6667 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 6361 6491 . - . ID=g1076.t1.exon13;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 6361 6491 . - 0 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . exon 6133 6229 . - . ID=g1076.t1.exon14;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . CDS 6199 6229 . - 1 ID=cds.g1076.t1;Parent=g1076.t1 NODE_1755_length_9369_cov_43.929 . three_prime_UTR 6133 6198 . - . ID=g1076.t1.utr3p1;Parent=g1076.t1 #PROT g1076.t1 g1076 MDDLDDLDLSLVEESDPPYPVDAHYVSGNGTVAASAQRDYGDEREGVYSVAAAASAIVGAVMSSAQRNADTAASKMRVTARPSLQGGKGTDELHRLVQSALKDMDDPNCITFTGRTDPTKKKDASDKLEQLRTRSSQLEKEVDALIFRNRAQYATAYEELTAIHNTCDGDWATERIALKGQLKKIRHAVDVFRRTLSQAASKPDGIDKLKESMEVIESSISHFKNEQRQKYESLLVQERLLSKDIGAIADRIEALEVDDAPAHSPPREKVSAVPRVAAALARKGGSLPPEVAEFEHFLATSGGHSGGWDEYDHQIYLKWRRKQLTRALLLEHVAAQLPGKSCQEIDSHDNWMRQYDAKLALKKEAIRTWRGEKEAEKAVAIAKEEEEVATKLPSTPHAAWQSDKEKEEKLQRIAIWKEQREAERQRTEQLKQIEIDEKQRSVEKEKERRAAEKARLQTYQYVRSVEKKEANTKLLQQSRISVSQDDLLLLQQRDARKLEDKRAKKLAKELEEQEKQRRLDKLRAKVEVKADRDPARLFRATEGMLQRRSFSSEDVGAARGLSLAHITHRAVPDWRRGL* # ORIGINAL: g1073.t1 original gene structure, not modified by PASA NODE_1755_length_9369_cov_43.929 AUGUSTUS gene 254 1493 . - . ID=g1073;Name=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS mRNA 254 1493 . - . ID=g1073.t1;Parent=g1073;Name=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS exon 1134 1493 . - . ID=g1073.t1.exon1;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS CDS 1134 1493 . - 0 ID=cds.g1073.t1;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS exon 930 1028 . - . ID=g1073.t1.exon2;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS CDS 930 1028 . - 0 ID=cds.g1073.t1;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS exon 716 829 . - . ID=g1073.t1.exon3;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS CDS 716 829 . - 0 ID=cds.g1073.t1;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS exon 254 364 . - . ID=g1073.t1.exon4;Parent=g1073.t1 NODE_1755_length_9369_cov_43.929 AUGUSTUS CDS 254 364 . - 0 ID=cds.g1073.t1;Parent=g1073.t1 #PROT g1073.t1 g1073 MEGDSSSVGEEHLVVDVERDDIDIGMHPGQGLPVNTGDTAGDDANERRPTAVSTVVVIQPGSLNLRIGLASDALPRTLPHVIAWRSKCKGKSVGGTTGIAQLGLRSARNRVDGTDVVEVEFADADIELLASSKERDVKKRRVDMKKKVAFLSQIASFNDSARADRIPAHNDPMSVEVTDVSLEPQFKIGEEKYSAVLLVPDMPDRLTVRVMMDVLLVDMGFSSVTAVQ # PASA_UPDATE: g5589.t1, single gene model update, valid-1, status:[pasa:asmbl_460,status:12],[pasa:asmbl_462,status:12], valid-1 NODE_111_length_39047_cov_40.0019 . gene 8376 11580 . - . ID=g5589;Name=g5589.t1 NODE_111_length_39047_cov_40.0019 . mRNA 8376 11580 . - . ID=g5589.t1;Parent=g5589;Name=g5589.t1 NODE_111_length_39047_cov_40.0019 . five_prime_UTR 11332 11580 . - . ID=g5589.t1.utr5p1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . exon 10387 11580 . - . ID=g5589.t1.exon1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . CDS 10387 11331 . - 0 ID=cds.g5589.t1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . exon 9978 10182 . - . ID=g5589.t1.exon2;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . CDS 9978 10182 . - 0 ID=cds.g5589.t1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . exon 9707 9852 . - . ID=g5589.t1.exon3;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . CDS 9707 9852 . - 2 ID=cds.g5589.t1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . exon 9322 9577 . - . ID=g5589.t1.exon4;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . CDS 9322 9577 . - 0 ID=cds.g5589.t1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . exon 8376 9172 . - . ID=g5589.t1.exon5;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . CDS 8694 9172 . - 2 ID=cds.g5589.t1;Parent=g5589.t1 NODE_111_length_39047_cov_40.0019 . three_prime_UTR 8376 8693 . - . ID=g5589.t1.utr3p1;Parent=g5589.t1 #PROT g5589.t1 g5589 MVPPSLADHRDKKVSSTMASSYLPSPPPSAAKNRHVAALARKEQLPTPKNAAVNTSVFVLSPPEEDDVGGRPAKSPKPLPELAVSHSLTHKRHMDNHLSPYMPSPRKAVPPPPPSKNGTPMNHLNRSRSAFLSPVPQKIVTGQASKASLSPLYNPSVQGTYLDQCFEMQGRIGAGCFSEVYRVRGKEDGLLYAVKRTKQPFRGVIDRDSKLREVAAVRSLHGHPNCVACVDAWEESGYLYIQMELCERSLKDYSESLHVLDEDELWDFLADIASGLKHIHTHNLVHCDIKPANIFLTEDHTLKIGDFGISKSTDSNADSDEENEGDGMYLAPEVLKGHIGAAADIFSLGLTMFEIAVNVDLPANGPMWQSLRSSKDFPRELIECVSSELADLIVWMTDPDPNNRPTVDDILAHHIVSAHAARRRKAIVVRNIRDGTFRLFIALWHRLCLCVAVVVHCIAHMVARDGNSVGYAEDREDSRSHREDYHVGRRVELPRTVFQGTGNPSSTRRYYESEHEDASGNESDPASPITLRRQSMASSLHATQMRPVLRGSGSDAGVIRPVSPAVGIHVYSPPAPADHSPLFFGSPPSARAAAQPTVPQQQEIGVRGVANRRTPPKALFAANGVAAKRQSAEARVGGFLGSDDEGDCAPFASGDEMGVEDRPRKLIGFFDDAASD* # ORIGINAL: g5593.t1 original gene structure, not modified by PASA NODE_111_length_39047_cov_40.0019 AUGUSTUS gene 23765 34867 . - . ID=g5593;Name=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS mRNA 23765 34867 . - . ID=g5593.t1;Parent=g5593;Name=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 34736 34867 . - . ID=g5593.t1.exon1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 34736 34867 . - 0 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 34470 34598 . - . ID=g5593.t1.exon2;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 34470 34598 . - 0 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 34303 34359 . - . ID=g5593.t1.exon3;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 34303 34359 . - 0 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 33912 34017 . - . ID=g5593.t1.exon4;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 33912 34017 . - 0 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 33654 33759 . - . ID=g5593.t1.exon5;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 33654 33759 . - 2 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 33217 33455 . - . ID=g5593.t1.exon6;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 33217 33455 . - 1 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 32855 32972 . - . ID=g5593.t1.exon7;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 32855 32972 . - 2 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 28253 32615 . - . ID=g5593.t1.exon8;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 28253 32615 . - 1 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 26158 27982 . - . ID=g5593.t1.exon9;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 26158 27982 . - 0 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 24155 25933 . - . ID=g5593.t1.exon10;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 24155 25933 . - 2 ID=cds.g5593.t1;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 23765 23982 . - . ID=g5593.t1.exon11;Parent=g5593.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 23765 23982 . - 2 ID=cds.g5593.t1;Parent=g5593.t1 #PROT g5593.t1 g5593 MRAATLEETGGALPRLRPAQIVTGAVQDGRQVVGIGAAFGHRFMAYATGRKVVVVDRNFQAVQMLEMQTGAADGLVLSVSASEGSGKIAASYGTHIVIFEPYQIESSSAAGGFSSAVAVRWRETASLLADGIITCLSWTTDGDYLLTGGTSVSVWRHRVARSDEASGSQYKCIWTECLPSPVMCAAFAPEGHVFATAGKVCEALSHHPPTPAHPPTNNCMLDGDESMRDSFSSIGCNFTLTMQYDRCIKVWFRREDDMVGVPTSIPKKGAQYNFVYLPHPRAVTGFSWRQPCDCPRPCSSRVLLSNCRDNVCRIWSESSARGGFFASETRSTFATAISPSSSTPSFAVTYFEVAAIDPYPQSAQLQGFPSASGAQRKLHAGQFTPNWLNCHAVYRARRLDVASASGQKQARQQQQQQQQQQQQFKVGHSAHPSGLPIYSGESTGDASNAAVRACDHSEMVFCAQSDGTLVVWRVDGLDDTPRRSPRVSLASRIPSAFPTQDAATFTSFTVAASDVPFATSRGSQRTSSMKRAPALQQVGSGGKNVLASASAVRAVAVVAQSGTPLSATTPDRSRSVSRQTTRDSDDLKKSAAPANTDASGASASASSRIPNRPAEVLLLCRHADGSMSSWRVAMAELPSFAAVVGVSFASRVYGHRAPVAQFVAHPASDRLAVSIGRSDERKDDSATFCGGASGASSSSGAADTLGTASLSGEVLLWRATHSRGLSHVHAPPLAEAARLWLPPSGLPHAAAWFPYDDRIALAAADGVWLLGVARVSAERDADEVVALQSGVASESTPARAFGMSRAGNDDDAAVDSAHLLELRRLSRLPTSEECGPFLSVHVIPREWVASSADASSSATATTPAARRPMGGFRKDDADEEQAVRVERSLAAMLSSSPASSASPHFSRRLTTSTPTGKIVQIPALSGSLGSLAGGDADALPLFHPAAYVVGVCADGVTAWVWSVSADDGTNSVGLGSLVGRALRLPFAGEAKPAVSPFRLLARAETQSASASADCTRAVSVATAPLGALGGAGGPPPYSLAIGCADGTLRFLSLVSAPGSSSAAGKQVTLVSVGGRGLAATPGATPQRETECTGGIVPNTAVVAHAAGGSASVLAVLPSGGGRIAVVSSVGVVMYECESMGDRFVIEARISVHDVMGACWLCAEGEHPILALLAAGHLRMYAPMRSRVTAAALGTDRSTSGFVWVLRGCWSFELNIARPPPIASASSSSVVADAPEGSFQSACVMAFFGDGCLAVASSHQIAVFSKWLDFSLPAEGSGSGPVRGQPPTPETVDGAPPAVSDVDSALNAALATRVSWHARDNRCVFVREPCVFDLLPPCMPLYHPWVLRELLRDGQRARISAILGHLTHCLARADSAGDDLDDTKSDAGYVDASGSFCVTPVRPVALPRRTTDTLLAGGDDGEDTPRTIRSSVAASSASMSSQQAQRSKDYSELFAHPTAPTAGDDVELSGSDKDSSVDSDDEYDNYDDGQPAPFGAKEARVLGERLAGIELPGITPQEQTILLAIVETFARVEGGGTANNPLDECALRFLLAARQHSFLCRLQRGGERERRRRLGIDPVDIAWALQSESQETLFTECFRDKANDLDWPDVRELGAGYWLRGGDPLRRLAERLAKTRYAREDSQTRVLDTAVWYTATKKKSLLTALFRKAGDERMAQFFMNDFSQDRWRTAAHNNAYQLMSKQRFEHAVAFFLVGNALSDAVSVCLRKLFDPQLAYVIARLYEGDDGPTAKQILVDHIAPMARAQGQPALASVAHWLVKDYAAALEDLLVSTPASAPTSSAPPAPPSVPSSPGPLSAADQERPSLYTFFPDADKDAEVAAHFRGGSVVPHALYRHLRSRPQLRLASGVAETSLSEQRLLLRAACELFAKGAPLLALDVLCLLDSVSPFDEHSSLADDSDDDGDGNDEDANVTGAHGGSALAGHTSAVKMTHSDMINTGQVSFDDWDFDSFGATKSARFIKSKTTEAARARKESHGATPKRGRSVGCRFVRRSLIQRAAVAVLCNSVLSSPTDADWPTTYARLCDDARALGTPFGGHVLASAVASLCFRKGWLDPAASLVGGENILSGDDALAQWAVEIAAFVVSGEPPLVSTMRGAAEEGDAAASDCPDVGVVSKDAVSLAAAAAIALKHRQKLLSSRAEKSDAVLFGLPRGEKDRHARALGDLARSLSLAAHRRQLGIGQAYSQMAPELVCELSWSVYLGLVLSGWLRGDWGAMLPLLLNAPMRAVMAEVLEVFPPRCPLADYYATPVEINEYLASQTASEAESNEDSDAETRSDGSDDALASAGSASGSGRERGRDRLRQLPGPGDMMFYEALLELVIAEHIVITLQRFLLSFGMDSDDIAARSGHLEGIVRGLNRWLVQMNALVARMPRPVLPELDVSGRQRHVRAQRLAFFLDPRRNPFRRHPAARQLWHFMVRQETVQPTLCHFLFGDGEDRDATAAFAGGAVLDAGSGALAVPSATGASPAPNPSPTTVFDGEGVVVIHRDPGDHSALSFCFNGAQQERRGIVVAVATTRELCEVTLGDAEGRDDDSRGASGMGSRVQSLSRIASVGNLHGSTGNLLARSSSFSALHTLASSGGQGLPPPLPALHSQHNVATTMGMSSASTAGGLGRSSSLISPEAFATFNVGERRSNIPGAAASRSRTPDPSAQHGLVSSLAPPDVPSGRSSVTLTSQGSAQGASGAGGQSVTNAHGKMPIGKVAFRRNIVGLQWVAAHPSMPFYLSGSADGHVTLWQFGQPESLASYVLGGSMPASAAAAGSGGLGAAVGGGQPLAGYSNARITRVRFSPLGDKFAVADSAGSLSLFRFDASNRSNTAYRTLHCHSRGLFDFIFLGASSLIATAGLAADGKNVALWDTLLPAGRTRLKGFVVNDGGSHAVAHCESHGVLLSGGKGGTIAVIDIRSRRVLHSFTAHSPEAIIRSIAVCAETDECISGSNDGVLKVWSIATHKERMTLRGVHTKQNFFRQETGTGVYCMEVADMHLYSSGSDGTLVRRPIPRLASASDF* # PASA_UPDATE: g5591.t1, single gene model update, valid-1, status:[pasa:asmbl_463,status:3], valid-1 NODE_111_length_39047_cov_40.0019 . gene 13462 16422 . - . ID=g5591;Name=g5591.t1 NODE_111_length_39047_cov_40.0019 . mRNA 13462 16422 . - . ID=g5591.t1;Parent=g5591;Name=g5591.t1 NODE_111_length_39047_cov_40.0019 . five_prime_UTR 16377 16422 . - . ID=g5591.t1.utr5p1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 16198 16422 . - . ID=g5591.t1.exon1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 16198 16376 . - 0 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 15912 16080 . - . ID=g5591.t1.exon2;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 15912 16080 . - 1 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 15705 15813 . - . ID=g5591.t1.exon3;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 15705 15813 . - 0 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 15463 15599 . - . ID=g5591.t1.exon4;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 15463 15599 . - 2 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 15217 15314 . - . ID=g5591.t1.exon5;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 15217 15314 . - 0 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 15046 15082 . - . ID=g5591.t1.exon6;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 15046 15082 . - 1 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 14833 14909 . - . ID=g5591.t1.exon7;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 14833 14909 . - 0 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 14449 14616 . - . ID=g5591.t1.exon8;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 14449 14616 . - 1 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 14183 14305 . - . ID=g5591.t1.exon9;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 14183 14305 . - 1 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . exon 13462 14021 . - . ID=g5591.t1.exon10;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . CDS 13907 14021 . - 1 ID=cds.g5591.t1;Parent=g5591.t1 NODE_111_length_39047_cov_40.0019 . three_prime_UTR 13462 13906 . - . ID=g5591.t1.utr3p1;Parent=g5591.t1 #PROT g5591.t1 g5591 MPRPLSAPPLRGIFFSEFHHVTGPMLTWQVPDGYISQEVFEALSEYIITKPQLCHKPVAIVAQGHKIMGFPISIENKKYKRNVLQFNICFVFKTDADACAYELAVRKTARYLQALELECEFIFKPETKPQIQEILTTIFDGLNANGECIIPVNDANTMYLKLFPARFTPSPVRDHEVPFPVRLLDSFAIDKWDLSMQQILPFVDGVNHVKKIATKADMDISIVRRCVEHFVYYGIVKMIDIFQYSSVYTVTGLITQLVNEEDADSRDGRTLAEVRKECVAFVTRNGSPSPPFETVFALYCRLRSDQPYREFCMESSLPSLGIDERRFVQYGLISGFLRCIHPYPVRLALPSASADTGAVLPKIVRRMLDGTKSYNEICCAANESHESLDRMLREDPQTVVIFK* # PASA_UPDATE: g5594.t1, single gene model update, valid-1, status:[pasa:asmbl_464,status:3], valid-1 # PASA_UPDATE: g5594.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_465,status:3], valid-1 NODE_111_length_39047_cov_40.0019 . gene 35785 37689 . + . ID=g5594;Name=g5594.t1 NODE_111_length_39047_cov_40.0019 . mRNA 35785 37689 . + . ID=g5594.t1;Parent=g5594;Name=g5594.t1 NODE_111_length_39047_cov_40.0019 . five_prime_UTR 35785 35823 . + . ID=g5594.t1.utr5p1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . exon 35785 35896 . + . ID=g5594.t1.exon1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . CDS 35824 35896 . + 0 ID=cds.g5594.t1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . exon 36335 36510 . + . ID=g5594.t1.exon2;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . CDS 36335 36510 . + 2 ID=cds.g5594.t1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . exon 36826 36993 . + . ID=g5594.t1.exon3;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . CDS 36826 36993 . + 0 ID=cds.g5594.t1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . exon 37182 37259 . + . ID=g5594.t1.exon4;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . CDS 37182 37232 . + 0 ID=cds.g5594.t1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . exon 37421 37689 . + . ID=g5594.t1.exon5;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . three_prime_UTR 37233 37259 . + . ID=g5594.t1.utr3p1;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . three_prime_UTR 37421 37689 . + . ID=g5594.t1.utr3p2;Parent=g5594.t1 NODE_111_length_39047_cov_40.0019 . mRNA 35785 37689 . + . ID=g5594.t1.1.5b6be70a;Parent=g5594;Name=g5594.t1 NODE_111_length_39047_cov_40.0019 . five_prime_UTR 35785 35823 . + . ID=g5594.t1.1.5b6be70a.utr5p1;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . exon 35785 35896 . + . ID=g5594.t1.1.5b6be70a.exon1;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . CDS 35824 35896 . + 0 ID=cds.g5594.t1.1.5b6be70a;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . exon 36335 36510 . + . ID=g5594.t1.1.5b6be70a.exon2;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . CDS 36335 36510 . + 2 ID=cds.g5594.t1.1.5b6be70a;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . exon 36826 36993 . + . ID=g5594.t1.1.5b6be70a.exon3;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . CDS 36826 36993 . + 0 ID=cds.g5594.t1.1.5b6be70a;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . exon 37182 37689 . + . ID=g5594.t1.1.5b6be70a.exon4;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . CDS 37182 37232 . + 0 ID=cds.g5594.t1.1.5b6be70a;Parent=g5594.t1.1.5b6be70a NODE_111_length_39047_cov_40.0019 . three_prime_UTR 37233 37689 . + . ID=g5594.t1.1.5b6be70a.utr3p1;Parent=g5594.t1.1.5b6be70a #PROT g5594.t1 g5594 MFRLVASRALRVAVARPAVQRSFSALAIAPRPALATLPRIERRGYSHAVETDAQFDARWEAFFKDTTIDSWDLRFGLENIFAQDLVPEPKILIAAFHACRRLNDFASTVRTIEAVREKAGSDAVYNQIVSALQPTMKELGIPTPEELGIGSNAKA* #PROT g5594.t1.1.5b6be70a g5594 MFRLVASRALRVAVARPAVQRSFSALAIAPRPALATLPRIERRGYSHAVETDAQFDARWEAFFKDTTIDSWDLRFGLENIFAQDLVPEPKILIAAFHACRRLNDFASTVRTIEAVREKAGSDAVYNQIVSALQPTMKELGIPTPEELGIGSNAKA* # ORIGINAL: g5587.t1 original gene structure, not modified by PASA NODE_111_length_39047_cov_40.0019 AUGUSTUS gene 1102 5319 . - . ID=g5587;Name=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS mRNA 1102 5319 . - . ID=g5587.t1;Parent=g5587;Name=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 4947 5319 . - . ID=g5587.t1.exon1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 4947 5319 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 4419 4807 . - . ID=g5587.t1.exon2;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 4419 4807 . - 2 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 3997 4243 . - . ID=g5587.t1.exon3;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 3997 4243 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 3280 3689 . - . ID=g5587.t1.exon4;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 3280 3689 . - 2 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 2911 3099 . - . ID=g5587.t1.exon5;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 2911 3099 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 2255 2692 . - . ID=g5587.t1.exon6;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 2255 2692 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 2023 2145 . - . ID=g5587.t1.exon7;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 2023 2145 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 1601 1774 . - . ID=g5587.t1.exon8;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 1601 1774 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 1102 1350 . - . ID=g5587.t1.exon9;Parent=g5587.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 1102 1350 . - 0 ID=cds.g5587.t1;Parent=g5587.t1 #PROT g5587.t1 g5587 MLRLVSRAPAVPSLTLKVPVRAMAVSTRPDKSSLPSKSDAVELPKSAQVVICGGGIIGCSLAYHLAKLGMKDVLLLEQGSLSCGTTWHAAGLIGKMRGTFTETKLSDYGAKLYANLEQEVGLATGWRQCGSITVARNQERLTLLRRNATKASAFGIRAEIIGPSEIAKYWPHMRTDDLVGALWLPEDGEASPSDLCQALAKGARNRGARLVERVTVEKVITHNDQVVGVKTDRGDVQCEIFVNTSGQWSRDVGKLSYPEVPVPLHSAEHFYIVSKAIPGVLPDLPIMRDPDGYTYFREWGGGIVAGGFEPKCKPVFHDGIPKPFEFELLQDDWDHFSVLMDEILLRVPALQTAEIRQMVNGPESFTADNQYILGEAPQIRKYYVAAGMNSSGIASAAGAGKALSEWIYNDEPTMDLWAVDVRRFAKFNNNKRFLRDRTLETLGLHYQIPWPKRELESCRAIRRSPLYDRLSAKGASWGAKLGWERPNWFAPAGVEPKNKYTFNRQNWFPYVRDECKVAREGVVAFDVTSFSKFLVQGRDAATVMNRICANNMDVDDGKIIYTGMLNARGGFETDVTVTRLSRNQFLIISPTAQTTRDYAWITRNVPTESHCVVTDVTSAYSVLAIMGPKSRDLLKKLGPADLSDAAFPFGTSKDIDLGYANVRASRITYVGELGWELYIPQEFTAHVYEALHEAGASFGLKDCGYYAIDSLRVEKAYRAWGAELSPDYTPLEAGLGFAVDMEKAGGFIGKEALVKQKKEGIRRRLVNFVIEDPEAHPWGDEAIIRDGKIVGFASSAAYGHTLGRAVCMGYVQDKAADGSANIVTPDYVKSGKFEIEIAGRRYKASASLRAPFDPNNLRVKGQY* # PASA_UPDATE: g5586.t1, single gene model update, valid-1, status:[pasa:asmbl_459,status:12], valid-1 NODE_111_length_39047_cov_40.0019 . gene 211 427 . + . ID=g5586;Name=g5586.t1 NODE_111_length_39047_cov_40.0019 . mRNA 211 427 . + . ID=g5586.t1;Parent=g5586;Name=g5586.t1 NODE_111_length_39047_cov_40.0019 . exon 211 427 . + . ID=g5586.t1.exon1;Parent=g5586.t1 NODE_111_length_39047_cov_40.0019 . CDS 211 336 . + 0 ID=cds.g5586.t1;Parent=g5586.t1;5_prime_partial=true NODE_111_length_39047_cov_40.0019 . three_prime_UTR 337 427 . + . ID=g5586.t1.utr3p1;Parent=g5586.t1 #PROT g5586.t1 g5586 IRSAVKGFQDRLWGTRVDVDAELARELQRLSKLEEAGRARS* # ORIGINAL: g5588.t1 original gene structure, not modified by PASA NODE_111_length_39047_cov_40.0019 AUGUSTUS gene 6197 7982 . - . ID=g5588;Name=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS mRNA 6197 7982 . - . ID=g5588.t1;Parent=g5588;Name=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 7845 7982 . - . ID=g5588.t1.exon1;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 7845 7982 . - 0 ID=cds.g5588.t1;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 7321 7467 . - . ID=g5588.t1.exon2;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 7321 7467 . - 0 ID=cds.g5588.t1;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 6563 6787 . - . ID=g5588.t1.exon3;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 6563 6787 . - 0 ID=cds.g5588.t1;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 6197 6376 . - . ID=g5588.t1.exon4;Parent=g5588.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 6197 6376 . - 0 ID=cds.g5588.t1;Parent=g5588.t1 #PROT g5588.t1 g5588 MATAARGPNPNDDAVLQKLASKNGVLIFEEDVVKGVSKKTTSSLKAALNRLKASGAVALREIPGDDGSPMTVVWNVVPSFVIPKAAAPPPVNSSAGAPALKPSLHAVPSSSSLSSVRQSTPGLRRIGFRTPIKQEGARHVDSVRTDLRDQVAKEEEKLRKLRMAKRYREKNDLRRLGELTANWKSVCQQALLALHYQLPGNPSIAELLIGNQIDPKVVSFDANDETFVS* # ORIGINAL: g5592.t1 original gene structure, not modified by PASA NODE_111_length_39047_cov_40.0019 AUGUSTUS gene 17324 23559 . + . ID=g5592;Name=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS mRNA 17324 23559 . + . ID=g5592.t1;Parent=g5592;Name=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 17324 17503 . + . ID=g5592.t1.exon1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 17324 17503 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 17624 17757 . + . ID=g5592.t1.exon2;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 17624 17757 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 17877 18334 . + . ID=g5592.t1.exon3;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 17877 18334 . + 1 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 18435 18671 . + . ID=g5592.t1.exon4;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 18435 18671 . + 2 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 18791 18852 . + . ID=g5592.t1.exon5;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 18791 18852 . + 2 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 18980 19117 . + . ID=g5592.t1.exon6;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 18980 19117 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 19266 19405 . + . ID=g5592.t1.exon7;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 19266 19405 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 19543 20227 . + . ID=g5592.t1.exon8;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 19543 20227 . + 1 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 20386 20487 . + . ID=g5592.t1.exon9;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 20386 20487 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 20603 20788 . + . ID=g5592.t1.exon10;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 20603 20788 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 21006 21347 . + . ID=g5592.t1.exon11;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 21006 21347 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 21545 21775 . + . ID=g5592.t1.exon12;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 21545 21775 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 21910 22283 . + . ID=g5592.t1.exon13;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 21910 22283 . + 0 ID=cds.g5592.t1;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 22581 23559 . + . ID=g5592.t1.exon14;Parent=g5592.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 22581 23559 . + 1 ID=cds.g5592.t1;Parent=g5592.t1 #PROT g5592.t1 g5592 MATSNGPRVNISEHIAKQASLSRVSSDPFAMPTMASRTLGSRLSLNGSKPAAAQESPIVPKRTFSAPTTTPTAPAAPFRPPLPSFVPVSKLSGEVPPPLVTAYRPAIRSAWDEERDKDLDADYAADALLLGVECPADDDFDDFEIGRDVARKDESADIPTTSPKVARSRRGTVSPPDSRGKQQTAKERRRSSQEQKDMEVKKSAESLQKAAIGMNVKVTDTTDPLRRPLHERLPGDGDTADEMEEFVDLTIPGLPEKQPTARLSASATDNRACESPVLIGTCDDDVDGRNNVGRKAENADKSVEFPDFGDDDADPFEDVDDDMDDAEFALNCQAAEDALLAFEDRGLHSSGSKDSRRNAASNERAGRGSATDAPNAGGYKGRAMSPEFESARPVVTQRPAGIEPTDRIQKLIDTTRDDYHRLNERICDMLDDMDDDPSLNGKLDALKFERKGIKAKLAAMEAQVAVRGIVTPKTPSVAFDDDAFSATARQTPATSSPYVEVAGNAAFRPRVPTVSAREPSRDHERDDSRASYGGGAQSKGIVSVYRPSAPQVETRPAVTAVTRIASLAVAAGRPRGADTIDLSRASQSSQPAPEAPRTQHPWTKDVEYVLKNVFGLKHFRLNQLEAINCTMSRRDCLVLMPTGGGKSLTYQIPGVVEQGVTIVVSPLLSLIQDQVQGLVALELGAVGLTGEQSEADHNRVYCEMQKKDSSLKIIYVTPEKVNRSPKFMDVLRNLYQRGAIARFVLDEAHCISQWGHDFRPDYKEMGLFKRQFPKVPVMALTATATQRVRTDILHQLGMASATVFSQSFNRPNLRYEVRKKSKKTLEEIVSLIKTTYRNKCGIVYCLSRNECETVADFLSKAGIRASHYHAGLSNSDRISIQSNWTSNEMQVICATIAFGMGINKPDVRFVVHYSLPKSIEGYYQESGRAGRDGLDSVCILYYSYADKAKTERMIQRGCENMSMLKIHMENLHHMVRYCENVVDCRRKQQLEYFGEMFDPASCKGTCDNCASTTVYVEKDLTDAAVKVVECLSDIQSRGGKATLLQLTDVLKGLSTAKMNQLGHNGVMHQGALSFLQKSDIERFIRKLVLESVIAEEAQVGFMDNVINYVEPSRDGRVLERLRRGQLRISLPIQEDTGANSRGKRKRAAESDDDDDHSPTSRRNMNGSAEYTEIFSALETLRDELEKKSGGAGGHRATLAYSTLEEMSVYLPQTKEELAECEGFPAAKIRQFGEKFLAITRAMAAKYPHLLEERKRRAAANAKSPYFPPGAEGDGADAEDDDGNDSDRGAARQPARKKQKQWKKSFGKKGKSGGAAGGNAGGGGGGAYAAKKAAAAAASKNPYRAPTGGGSNNGGYAAGHKQPAQPQFKPPAAPRAATTGGNAAPTTGIYMMKTPSAAGAGNASATAQFFASVVRK* # ORIGINAL: g5590.t1 original gene structure, not modified by PASA NODE_111_length_39047_cov_40.0019 AUGUSTUS gene 12612 13722 . + . ID=g5590;Name=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS mRNA 12612 13722 . + . ID=g5590.t1;Parent=g5590;Name=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 12612 12994 . + . ID=g5590.t1.exon1;Parent=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 12612 12994 . + 0 ID=cds.g5590.t1;Parent=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 13163 13252 . + . ID=g5590.t1.exon2;Parent=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 13163 13252 . + 1 ID=cds.g5590.t1;Parent=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS exon 13563 13722 . + . ID=g5590.t1.exon3;Parent=g5590.t1 NODE_111_length_39047_cov_40.0019 AUGUSTUS CDS 13563 13722 . + 1 ID=cds.g5590.t1;Parent=g5590.t1 #PROT g5590.t1 g5590 MATQVVDTVSAVLGDIYRLAPRRLLVIFGAPVAYDILARHGGDVYGHHHFHLSSGTINALAGAYAGVLSTVPMTAAVALMKILLPASKEDLEVERAEDQNERRLEHDDKDTRQTGDMPWWKRTIARIRASRRLVMRYGIGMLAGAIYGYTVSHYPELRMLVSALAHIVWGWALTSSTVGAQIYATETHFVRAPMKVFTISHVPSRVLSAY* # PASA_UPDATE: g3509.t1, single gene model update, valid-1, status:[pasa:asmbl_5297,status:3], valid-1 NODE_2951_length_4657_cov_42.3175 . gene 437 1532 . + . ID=g3509;Name=g3509.t1 NODE_2951_length_4657_cov_42.3175 . mRNA 437 1532 . + . ID=g3509.t1;Parent=g3509;Name=g3509.t1 NODE_2951_length_4657_cov_42.3175 . five_prime_UTR 437 469 . + . ID=g3509.t1.utr5p1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . exon 437 550 . + . ID=g3509.t1.exon1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . CDS 470 550 . + 0 ID=cds.g3509.t1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . exon 650 785 . + . ID=g3509.t1.exon2;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . CDS 650 785 . + 0 ID=cds.g3509.t1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . exon 869 1326 . + . ID=g3509.t1.exon3;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . CDS 869 1326 . + 2 ID=cds.g3509.t1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . exon 1469 1532 . + . ID=g3509.t1.exon4;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . CDS 1469 1510 . + 0 ID=cds.g3509.t1;Parent=g3509.t1 NODE_2951_length_4657_cov_42.3175 . three_prime_UTR 1511 1532 . + . ID=g3509.t1.utr3p1;Parent=g3509.t1 #PROT g3509.t1 g3509 MGNALEKRVERAQKTGVFALSNEGLAKVPADLEKLKAVLRTLDLSGNNITDLPPAFATFTNLKHLTLASNRIEVFPAQISSLVKLETLSLAKNRLSTLPGSAFVKLTDLKKLVASDNRISAFPSELCSLAKLEVINLSGNVIETLPDQVGHLSCHEINLDRNRLVGVPSTIGDNTQLRVLRLSENCIVDGGIPARLLEDSAVSLITIDANPLDMHALQDTPAYEKYLARNTAARVKAH* # ORIGINAL: g3510.t1 original gene structure, not modified by PASA NODE_2951_length_4657_cov_42.3175 AUGUSTUS gene 1947 4511 . - . ID=g3510;Name=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS mRNA 1947 4511 . - . ID=g3510.t1;Parent=g3510;Name=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 4503 4511 . - . ID=g3510.t1.exon1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 4503 4511 . - 0 ID=cds.g3510.t1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 4230 4301 . - . ID=g3510.t1.exon2;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 4230 4301 . - 0 ID=cds.g3510.t1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 4008 4082 . - . ID=g3510.t1.exon3;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 4008 4082 . - 0 ID=cds.g3510.t1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 3705 3779 . - . ID=g3510.t1.exon4;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 3705 3779 . - 0 ID=cds.g3510.t1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 3369 3495 . - . ID=g3510.t1.exon5;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 3369 3495 . - 0 ID=cds.g3510.t1;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS exon 1947 3175 . - . ID=g3510.t1.exon6;Parent=g3510.t1 NODE_2951_length_4657_cov_42.3175 AUGUSTUS CDS 1947 3175 . - 2 ID=cds.g3510.t1;Parent=g3510.t1 #PROT g3510.t1 g3510 MRLEHLNLLKKATHFEKLSGELEHYKSSKDVEVAGLHAELDRYKEGLSKMQSDVAGENIRLNAELAKKTKEFEELQKSLLSQRASLDGKVATQESTIVALHEDVERLKQQHFTERRIIIDKAVHDARMIVENALRDLDDPAFAGNQHSTAEGVIDAAHSSVETNAHLAKLFASFVADPTASLPYEVIGDTIMFARMVSDLMSSAKGNTRLAGDEGTSEEIILNTRTAGEAALEFIGSLQCGDCGVEALKSKGPASIALAERYKDRLSGLIGVTDRLIIRDVEDTDKLGKVVEEEMMAAAQAIASAARRIQDLIDKANREQEGLKLDINTSILAAAQSLMNCIRVLIERATTVQSEIVDLGKGGASAQEFYKKNSRWTEGLISAAKAVGFGATMLVDAADKVVQGTGKFEELIVASREVAASTAQLVAASRVKSGAKGKSQDQLEAASKTVTSAVKQLVAAASSASHVVAKEKEKANDFNKLSMHQAKRAEMELQVKVLELETSLARERERLGEMRRHNYKDAGDVGNE* # PASA_UPDATE: g8728.t1, single gene model update, valid-1, status:[pasa:asmbl_4571,status:12], valid-1 NODE_2573_length_5835_cov_63.424 . gene 336 5615 . - . ID=g8728;Name=g8728.t1 NODE_2573_length_5835_cov_63.424 . mRNA 336 5615 . - . ID=g8728.t1;Parent=g8728;Name=g8728.t1 NODE_2573_length_5835_cov_63.424 . five_prime_UTR 5576 5615 . - . ID=g8728.t1.utr5p1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 5466 5615 . - . ID=g8728.t1.exon1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 5466 5575 . - 0 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 5046 5173 . - . ID=g8728.t1.exon2;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 5046 5173 . - 1 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 4430 4611 . - . ID=g8728.t1.exon3;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 4430 4611 . - 2 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 4093 4217 . - . ID=g8728.t1.exon4;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 4093 4217 . - 0 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 3568 3778 . - . ID=g8728.t1.exon5;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 3568 3778 . - 1 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 2947 3286 . - . ID=g8728.t1.exon6;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 2947 3286 . - 0 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 2470 2608 . - . ID=g8728.t1.exon7;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 2470 2608 . - 2 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 2242 2339 . - . ID=g8728.t1.exon8;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 2242 2339 . - 1 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 1890 1954 . - . ID=g8728.t1.exon9;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 1890 1954 . - 2 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 642 1574 . - . ID=g8728.t1.exon10;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 642 1574 . - 0 ID=cds.g8728.t1;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . exon 336 506 . - . ID=g8728.t1.exon11;Parent=g8728.t1 NODE_2573_length_5835_cov_63.424 . CDS 336 506 . - 0 ID=cds.g8728.t1;Parent=g8728.t1;3_prime_partial=true #PROT g8728.t1 g8728 MLHGEAVAIGMKKECEIARAMGIFSQANLGRLIDCIRSYKLDPTFPEHLAIPALMEKMAVDKKNSGGKKAVVVLKSIGKVNVKTAVYIQDALIVRVLSSHVTVAHSATPFVPNCSIAVPGSKSISNRVLLMAALGQGECNIAGLLHSDDTKVMLNALVALGVPPFRWLEDGNVVGLTGCGGRFTAPGEPLYLGNAGTAARFLTTVCTLVKESRDGAKSVLRIGGNKRMNERPIAPLVEALIENGCRVRYGGKAGSLPLEIEGTGLPGGAMRLSASISSQYVSSILIAAPYAEQPAHLSLVGGEVVSQPYIDMTLGVMRQFGVDVQRTAVDAYDIPKKPYANPNSVLVEGDASSASYPLAIAAITGGTVTVLNVGSNSLQGDAKFCDLMGRMGCTVRQSADTTTVTGPPRGQRLRAFDEDMSAMTDTFLTAAVLAAVAQGTTRIRGISNQRVKECNRIAAMVAELTKVGVVARELDDGIEIDGSDPATLHGAHIKCYDDHRVAMAFAVLNCAVPDIIITERACVEKTYPEFWDDLETKFGIPVVSAHSLSPEVHAQDKSGGSDVGRPFDMVIVGMRGSGKTHLGQAAAVALGRRFLDMDAFVEERLGMRIGEFVAANGWPAFREVESASLRDFFKERSALDSPVIVATGGGIVETEAGRDTLRWLAGDPAACTAGRVRSYAVVVQVVRGIVDVVAYLSSDPTRPSLGEPTESIWNRRKQHYRDCSNYEFVLRSGESAWSEVDADFVRFAHRVTDHSPRATRHAPSAALSTVGSEEEYESLLSFLGGERHTHFLSLTHGNYADASRDLAEMTVGISAVELRIDLLKDRSCENIAQQ # PASA_UPDATE: g11280.t1, single gene model update, valid-1, status:[pasa:asmbl_7969,status:12], valid-1 NODE_5270_length_936_cov_31.0627 . gene 117 917 . + . ID=g11280;Name=g11280.t1 NODE_5270_length_936_cov_31.0627 . mRNA 117 917 . + . ID=g11280.t1;Parent=g11280;Name=g11280.t1 NODE_5270_length_936_cov_31.0627 . exon 117 306 . + . ID=g11280.t1.exon1;Parent=g11280.t1 NODE_5270_length_936_cov_31.0627 . CDS 117 306 . + 0 ID=cds.g11280.t1;Parent=g11280.t1;5_prime_partial=true NODE_5270_length_936_cov_31.0627 . exon 523 917 . + . ID=g11280.t1.exon2;Parent=g11280.t1 NODE_5270_length_936_cov_31.0627 . CDS 523 707 . + 2 ID=cds.g11280.t1;Parent=g11280.t1 NODE_5270_length_936_cov_31.0627 . three_prime_UTR 708 917 . + . ID=g11280.t1.utr3p1;Parent=g11280.t1 #PROT g11280.t1 g11280 RCKVADALEPVTFNAGEVIIRQGDNDNDRFYIVESGKCVVKKQFPDKKEAVEVMKLGRGGYFGEIALLTDQPRAATVIALDTVKCVVLDRASFVRLMGPCQDILKRNIENYRKIDRDLKGGQLV* # PASA_UPDATE: g13842.t1, single gene model update, valid-1, status:[pasa:asmbl_7225,status:12], valid-1 NODE_4327_length_1816_cov_32.008 . gene 202 1716 . + . ID=g13842;Name=g13842.t1 NODE_4327_length_1816_cov_32.008 . mRNA 202 1716 . + . ID=g13842.t1;Parent=g13842;Name=g13842.t1 NODE_4327_length_1816_cov_32.008 . exon 202 326 . + . ID=g13842.t1.exon1;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . CDS 202 326 . + 0 ID=cds.g13842.t1;Parent=g13842.t1;5_prime_partial=true NODE_4327_length_1816_cov_32.008 . exon 700 781 . + . ID=g13842.t1.exon2;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . CDS 700 781 . + 1 ID=cds.g13842.t1;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . exon 1168 1267 . + . ID=g13842.t1.exon3;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . CDS 1168 1267 . + 0 ID=cds.g13842.t1;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . exon 1638 1716 . + . ID=g13842.t1.exon4;Parent=g13842.t1 NODE_4327_length_1816_cov_32.008 . CDS 1638 1716 . + 2 ID=cds.g13842.t1;Parent=g13842.t1;3_prime_partial=true #PROT g13842.t1 g13842 VGDIPDADVAPPENVLFVCKLNPVTTNEDLELIFSRFGPIKSCEIIRDPKTGDSLQYAFIEYEKEEHCEEAFFKMDNVLVDDRRIHVDFSQSVAKLSHIQKPKWAQGGDSGSSQKFRLKEPRAHPGQR # ORIGINAL: g1911.t1 original gene structure, not modified by PASA NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS gene 5773 6855 . - . ID=g1911;Name=g1911.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS mRNA 5773 6855 . - . ID=g1911.t1;Parent=g1911;Name=g1911.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS exon 5773 6855 . - . ID=g1911.t1.exon1;Parent=g1911.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS CDS 5773 6855 . - 0 ID=cds.g1911.t1;Parent=g1911.t1 #PROT g1911.t1 g1911 MVTSSAMTSIDGSFCPYHQSGFRSAIEGVVNKCRKLASTAAPTATEGVLLEKATARKIFCTCESNVVGDAAQGDSPEDASTEKIASLPADIAAWPTTATEILRLCPKGFIQSIGRQITNGTADSHTIRAAMILSRFFRIVSMAQCGQHIQFNCNGSPIKIPVTSTSHTAAKTVISEVFPMLLSAQDVGTFIGKSGYGLCAARSVGAAVSIKVGILGSEIRLKGHPENIAKAKSLLAQRMTIVSREQEERRRAKAERTAAKAARFANRRSMHSNSRGGPSLFSPALQSGKDAASDLYERSYKAAMYGKKRGQYGKHRGKSARAVSPKEYHKHKGNGRVAKSSPLTSKSRRRELRDSAASAW* # ORIGINAL: g1910.t1 original gene structure, not modified by PASA NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS gene 1353 5003 . - . ID=g1910;Name=g1910.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS mRNA 1353 5003 . - . ID=g1910.t1;Parent=g1910;Name=g1910.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS exon 1353 5003 . - . ID=g1910.t1.exon1;Parent=g1910.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS CDS 1353 5003 . - 0 ID=cds.g1910.t1;Parent=g1910.t1 #PROT g1910.t1 g1910 MDASGYFASFPLDLFDLLLPFLSSEDATSLGSTCRSIRSALRSRRIYKLKRSPDLCRKFAQDCNFREEILAWLPQHRLDIFCRHWSADDGDGSVFAGIHTLVLHADPHASNPVRINVAALANVRSLTLTNSSLESDHVAQLRSVKTLSLRNCSGLSDVSALHSVKSIDLSYSSNVENMSSLGTIPTVSLEGCVCVHDVSALGRVHTLNLSCCLMSDVSALGGVHTLLLNNCPNVEDVSGLSSVHTLEMRHCSGVTDVSALGSLHNLSLEGCDINKGVQSLIHVPWVDVTTFNESMSNTYWSAVANELSKSPDDPTCVRKWCEHIHRVYLTRQGASSRRRSGPPSPDVVEALLHALALHSDSAELQAHAIAALRLLISSTLPLHLLLMCTLTAVSSLEADASVALEGCHLSTKLLQTHMPHATFFVTHGLCDAIVRRVLIHDEPTVQQAAVSTVGVFANADPTRQFLQQSDIVAALLQILSTQTSSPSLLTAAADALKCIAACCANQFDSCGAFEIVLKAIEGHMSHQDSSVVLAGFSLLSVLPVRRALINNGNAQTSFETTGWRSRLCNPWSATGTSLVMAAMYAHFKDVAVQELGLRALHCLDISTEPAGARMDMIACTSHAMDEHESNRGILEIGKRILERVVESEPCGHTRDGSETSLRAFGGAARQHLSDAHVQKLFSTFAGAIFQSDFPNVSEVLRSISMHALIAAIQFHMQSEDIVEPALTALACLLHHARTDQRDSEGKHVTVHPPARFHCIVAAIRLHSTSLAIQSAGCRILASEGVDHMSSARLCEVGAVDAIYAAMIRFTQKQQQLPPRQKDPISIPTNTQEEDSRRVAFKALVVFAMAEANTAAFCQDDRIEALLHELGRGDAVEIRASLLAALLGFARRSAVIRQILSKKNAVGRLLNTINTYLPEAEVRDAIAVLLSIAAEYPSAAARDLRAGCTNEYDTDCFPRVIAESAEEGREDGACTVIALASAAVRRQYLTGLGVPTLMSSIASALVGAMGAVPESVELQVAGCQAIARIVGSDGGLAGVAGVADVADVAGTLTGVVVNAMCANASEASVQAAACDALTALSAEGLAAVIDYDAIEGALPMRNKNRVIGHNGHATTDTYADSEMHSAANASQRPHAYSVIVECVERAMQTFPSNGNVMASALSTLTSLACDEVGTASIAECRTIRKALLMISRSPQSENVIMSVEASQLLAKVIYATG* # ORIGINAL: g1909.t1 original gene structure, not modified by PASA NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS gene 122 257 . - . ID=g1909;Name=g1909.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS mRNA 122 257 . - . ID=g1909.t1;Parent=g1909;Name=g1909.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS exon 122 257 . - . ID=g1909.t1.exon1;Parent=g1909.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant AUGUSTUS CDS 122 257 . - 0 ID=cds.g1909.t1;Parent=g1909.t1 #PROT g1909.t1 g1909 MAAESVPFSSKHANKEAERFEREQETAFLKAIRPTEKAPKEKHVR # PASA_UPDATE: g1912.t1, single gene model update, valid-1, status:[pasa:asmbl_1519,status:12], valid-1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . gene 8919 11401 . + . ID=g1912;Name=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . mRNA 8919 11401 . + . ID=g1912.t1;Parent=g1912;Name=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . five_prime_UTR 8919 9300 . + . ID=g1912.t1.utr5p1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . five_prime_UTR 9410 9590 . + . ID=g1912.t1.utr5p2;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 8919 9300 . + . ID=g1912.t1.exon1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 9410 9651 . + . ID=g1912.t1.exon2;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . CDS 9591 9651 . + 0 ID=cds.g1912.t1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 9793 10066 . + . ID=g1912.t1.exon3;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . CDS 9793 10066 . + 2 ID=cds.g1912.t1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 10370 10861 . + . ID=g1912.t1.exon4;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . CDS 10370 10861 . + 1 ID=cds.g1912.t1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 11023 11112 . + . ID=g1912.t1.exon5;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . CDS 11023 11112 . + 1 ID=cds.g1912.t1;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . exon 11329 11401 . + . ID=g1912.t1.exon6;Parent=g1912.t1 NODE_1415_length_11479_cov_42.3189_potentialcontaminant . CDS 11329 11401 . + 1 ID=cds.g1912.t1;Parent=g1912.t1 #PROT g1912.t1 g1912 MSSRESSGVPRHSRSSDSLNGSWIEVYSNGEGDFELVSGQETPLDGSFVASGESSAALRAMLREAVGRFDGSPHPKAHLPHSPMLEPVTDESEGESQHGDDDEDDHRGLMKSLSALMSSVGEIELPSPCFSPVSKATFGEGDSRMSRSGLNSAALSFCVDHVLCYQCRWERRLGRDALDSGAATPLSVDGFYGGNGSLASFDLIGCTVGAGLKGAIQKDAHVISPFRDLGCAGTAPRPNVFLCKRHLMDADALWDWSYSGDATFATSTPTERKEIRVREGRRRYRRGKLKSMYHGDILTRRTRMRRVGFPIAFVLPAFILSQLLSIALG* # PASA_UPDATE: g13587.t1, single gene model update, valid-1, status:[pasa:asmbl_5505,status:12],[pasa:asmbl_5511,status:12], valid-1 NODE_306_length_27478_cov_41.3606 . gene 215 1374 . + . ID=g13587;Name=g13587.t1 NODE_306_length_27478_cov_41.3606 . mRNA 215 1374 . + . ID=g13587.t1;Parent=g13587;Name=g13587.t1 NODE_306_length_27478_cov_41.3606 . five_prime_UTR 215 216 . + . ID=g13587.t1.utr5p1;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . exon 215 289 . + . ID=g13587.t1.exon1;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . CDS 217 289 . + 0 ID=cds.g13587.t1;Parent=g13587.t1;5_prime_partial=true NODE_306_length_27478_cov_41.3606 . exon 480 537 . + . ID=g13587.t1.exon2;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . CDS 480 537 . + 2 ID=cds.g13587.t1;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . exon 804 871 . + . ID=g13587.t1.exon3;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . CDS 804 871 . + 1 ID=cds.g13587.t1;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . exon 1060 1374 . + . ID=g13587.t1.exon4;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . CDS 1060 1109 . + 2 ID=cds.g13587.t1;Parent=g13587.t1 NODE_306_length_27478_cov_41.3606 . three_prime_UTR 1110 1374 . + . ID=g13587.t1.utr3p1;Parent=g13587.t1 #PROT g13587.t1 g13587 LVNFSVKGSAYERSLSLAREMIPNGPIALRMAKFAIDKGIESDRATGMAIEQSCYAQIIPTQDRIEGLKAFREKRTPVYKGI* # PASA_UPDATE: g13590.t1, single gene model update, valid-1, status:[pasa:asmbl_5509,status:3], valid-1 NODE_306_length_27478_cov_41.3606 . gene 16761 18736 . - . ID=g13590;Name=g13590.t1 NODE_306_length_27478_cov_41.3606 . mRNA 16761 18736 . - . ID=g13590.t1;Parent=g13590;Name=g13590.t1 NODE_306_length_27478_cov_41.3606 . five_prime_UTR 18636 18736 . - . ID=g13590.t1.utr5p1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . exon 18480 18736 . - . ID=g13590.t1.exon1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . CDS 18480 18635 . - 0 ID=cds.g13590.t1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . exon 18172 18339 . - . ID=g13590.t1.exon2;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . CDS 18172 18339 . - 0 ID=cds.g13590.t1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . exon 17599 17721 . - . ID=g13590.t1.exon3;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . CDS 17599 17721 . - 0 ID=cds.g13590.t1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . exon 17239 17399 . - . ID=g13590.t1.exon4;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . CDS 17239 17399 . - 0 ID=cds.g13590.t1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . exon 16761 17015 . - . ID=g13590.t1.exon5;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . CDS 16883 17015 . - 1 ID=cds.g13590.t1;Parent=g13590.t1 NODE_306_length_27478_cov_41.3606 . three_prime_UTR 16761 16882 . - . ID=g13590.t1.utr3p1;Parent=g13590.t1 #PROT g13590.t1 g13590 METDIPAWYRGVPTVTKWWLTGAFVLTLAANFNLISAYYLILDWENFAHKFQFWRIITAFLFMGKLGFPFLINLIFLYQYSRQNEDGLYGGRRADYVFQLSFMVIVLLIVGFLWPLRILGLALILANLYVWCQVNADVVVSFYFGLKFKATYFPWVLAAFNVLLGGDAFNELLGIAVGHLYYVLEYKFPETGGRRILHTPQFLYSLFPNTRASGVHGFAAPPPRQAAQPQAEGRRDWGRGNVLGET* # ORIGINAL: g13588.t1 original gene structure, not modified by PASA NODE_306_length_27478_cov_41.3606 AUGUSTUS gene 2076 7226 . - . ID=g13588;Name=g13588.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS mRNA 2076 7226 . - . ID=g13588.t1;Parent=g13588;Name=g13588.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS exon 2076 7226 . - . ID=g13588.t1.exon1;Parent=g13588.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS CDS 2076 7226 . - 0 ID=cds.g13588.t1;Parent=g13588.t1 #PROT g13588.t1 g13588 MNRHSSFKAYFTVTPPFLNTQRTGSLKSRRCDVAFRSCPTAGVAFCTYFVLIASLMASIVAQECQPFCAIKNQNIVTVEARGVSNIISADLDGDGQRDIIAASYSDSTISWFPNKHQGSFPDRHVITDTAYGAQSAVAADVDGDGLLDVIAASQVDNTVAWYRNLGERAFSQARYVTTDAIGAISAIAADVNGDSLPDILVASQSDDTVALYTNYGNGTFMGAHYISRDCIGAYSVAAADLDLDGDMDIIVACIRGNTVEWYENLMRGGGVSFSSKRVISSAMPMATFVTTAYVDSDEYPDILAASIENGTKVSWFKNGGGGRIGPERVMTTEADGTWAMCAADLDGDGDTDVVISSWNDGVIAWLENQEGDGTLFRKHTVSVNATGAVWVVTSDLDSDGDEDIVSGSWNDNKVAWYRNERDSIFTASPTATFSGGKLSSAHMFDVGADGSVDVVIINTNDPRVSWYERSIVTGQVVSRGTLLTAPETIADTCTTDLNRDGRVDLLLLLTNQSVVLYAQPTQPGSKWTPIWLSLPGDGTDGPYDSVACFQHPDIGTGIALSQSRTNDTTGTTSLHLSLSTYLSATGVLLGYGSPLTLEDCDSTSSLRWTDFDGDGLSDLLYIANGATALHWRRRRSRAMGSETEMWDDASALVEDEVDIASFEIGDVNGDYNNEIVVVSASENRVSCYRPLSDPQAVPLLITTKSPWARSVWLRDVDGDGDLDILTLADGTADVLSASYGVAKVAWHNNLGNLAFSDQLLLMEGEMDAQAEEGGAGVALMPGDIDGDGDLDIVSLWYDPIADTLAIRQHTNRGACYSICRSATCKMRTVTCRPLASGWQQLSRGYEFSDVTTVQAVGLVDTDTRRSPDESTLYVGSPSRPFIIRESVLHRAIRVEAGANVAIWDTTLSGRHISSNISAIYLGRQARLYMRNVTIEGFTSDFGAAIYAEDGAEIYLWDVILEGNRAERGGAIFVNRITSFNTQGVVIRNNAAAVGAGILYNGPGDAFALENMQGVAFESNVAADRPAQASTRMAGCYIEGWSNIVRNSRPLDPLHVVVVDLYGQPATSTVVSIALDVNPSPARLESYSVRRVSGGRADFAGVVIKAPPGKNITLRLEATADASEPDFVPCVTWAVVAPCDRNEYPIATECIQCPPPGHCKSAVAVSCGVDGANSACPAGMCVDGYSNDNGGGPCASIATAAQSSSNAAVIAPSILVPLVVIVAVFAVAGRIALRQWKANRSQEMHQEFLKRYGNLVLLEELQVMPQDVDLQTEIGSGEFGVVYSGRVFVQDRWRVCAIKTMKDTATVKDRESFIAEAEIMKGLGHKHVISLLGVMTASNLMIILEYAPHGSLKKFLGGIPSVRQGAIETHILLFQLCKQVAEGMAYLAAMGIVHRDLAARNILLGQSHIGEIVAKISDFGLSRELQGIDYIHSAVKKTKLPFRIMAPECFKRATFNTRTDVWSFGVLMWEVWTFGETPYAGINTAREIIAFFESGRRLERPRYAATDVFKITASCWRIAPEDRPTFNKLVDQFNELANTAGSDANDLNQLAHVLSAATGRRNSRASGGGGGSYKELQSMGGSSIDTNLGGSDVPHAYAEVDISSIGSNSVGRSTSFGRSAAAAMSLNATGLERVVTSMANDYYTRTVSTSSPSTSSQSQRKKQKRPDIQMSVLCEHPGGHGEGDEEREARDGGDLEESNGNHTQSTDNLVAGGVSNV* # ORIGINAL: g13593.t1 original gene structure, not modified by PASA NODE_306_length_27478_cov_41.3606 AUGUSTUS gene 26173 26926 . + . ID=g13593;Name=g13593.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS mRNA 26173 26926 . + . ID=g13593.t1;Parent=g13593;Name=g13593.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS exon 26173 26639 . + . ID=g13593.t1.exon1;Parent=g13593.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS CDS 26173 26639 . + 0 ID=cds.g13593.t1;Parent=g13593.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS exon 26785 26926 . + . ID=g13593.t1.exon2;Parent=g13593.t1 NODE_306_length_27478_cov_41.3606 AUGUSTUS CDS 26785 26926 . + 1 ID=cds.g13593.t1;Parent=g13593.t1 #PROT g13593.t1 g13593 MAARGLCVSLTKRAVQSASARVVDHLAHNTRAVVVHPFDALIAATPGQAQRTSDSPSAASCKSVHFRCDASDLSVPCMLAGPSTRIDGDVASGMWSAWPIGSRRSYATKARDPVIMDRAVAIVETSEAPSNESVADLLDQCLRASDLQSAMYLWKGLKCKGFVPTAEHHATLSRIHRSVDDTRHMTREKVGWCASTNTRGSL* # PASA_UPDATE: g13589.t1, single gene model update, valid-1, status:[pasa:asmbl_5506,status:12],[pasa:asmbl_5507,status:12], valid-1 NODE_306_length_27478_cov_41.3606 . gene 9624 16525 . + . ID=g13589;Name=g13589.t1 NODE_306_length_27478_cov_41.3606 . mRNA 9624 16525 . + . ID=g13589.t1;Parent=g13589;Name=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 9624 10277 . + . ID=g13589.t1.exon1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 9624 10277 . + 0 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 10402 10449 . + . ID=g13589.t1.exon2;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 10402 10449 . + 0 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 10729 10872 . + . ID=g13589.t1.exon3;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 10729 10872 . + 0 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 11297 11382 . + . ID=g13589.t1.exon4;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 11297 11382 . + 0 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 11887 12691 . + . ID=g13589.t1.exon5;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 11887 12691 . + 1 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 12932 13127 . + . ID=g13589.t1.exon6;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 12932 13127 . + 0 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 13396 13534 . + . ID=g13589.t1.exon7;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 13396 13534 . + 2 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 13710 13804 . + . ID=g13589.t1.exon8;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 13710 13804 . + 1 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . exon 13981 16525 . + . ID=g13589.t1.exon9;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . CDS 13981 16508 . + 2 ID=cds.g13589.t1;Parent=g13589.t1 NODE_306_length_27478_cov_41.3606 . three_prime_UTR 16509 16525 . + . ID=g13589.t1.utr3p1;Parent=g13589.t1 #PROT g13589.t1 g13589 MWPSTHILPIALLLLFSVELTLVFAPCVVAAVTQNIPIDGVGNNIARPTIGASSNNYLRLLPARYANASDGTPISAGLPSARLVSNLVCSRDVHASTHSISDTLPYWGQMIAHDITSTKSGSEAWHIPVPMCDRFFDGKCTNTSTIAFKRAARSVDAGGELTGVNLQTPFLDGSVLYGPNAVQAGVLRTYAGGKLNMSEGDLPPLNPPLPPPNDDAGRFFVTGDVRQNENPVITSFQTVMLREHNRKVALWAAADPSLSDQDLYDRGRAWIAALMQKITFSDYLTPLLGKKLPAYTGYNASIDPRVDIFFSVAAFRYGHSAIPMLIQRLNADGTAHSSGPLLLREARFNTRPLRTHGPEPILRGLGQQRDNEISSAIVGELRSSVDYGDYFDIASFNIQRGRDAGLPSHNDMRAYFGLPRIQNFTHLTGGDTESADILASLYPTIDDVDPWVAGLSEPTNPGALLGALFAASIEDQFRRLRDGDRFYFEAGNLPLSAEEIAEVRQTRLSDVIRRNMRSPAGTGLVTGDLFHKQPSPLDSSGGALSADGVYSFSANLHARVLLEWTIRDATYLDARITFKGTGWVGIGLGGKTMQSTDVIVGRVDDTTGEAIINDAFATGEVQPSLDVALGGTYDLTQVNGSQSAGVTVLQFTRLLVTKDTLDFALSEAVLVDVMVAFSDSDEPAYHGQDNRATGSVNFFTGESVCNEAESRFNTLAFHGALMGVIYCVGYPAGIMIARYGKRYHLWLAVHVEIMTFGASEVIVLIAVALTSSTAGHTQTNHSVTGLAIGALVLLQVVLGLASRSVMRRSVATLYAKAIRTCHMAVGYTMLVLGLLNAHRGIERLLLGMDNELRIAKGFYYAWVSVLTSAFLILEVHQLYFQHGHIFGLNKVAPSSDVDASKGKGSQGRLYTWKDISERVSSDGARLFVVNRTVYDLGDWVSVHPGGERILLSAVGTDITREFMGVPLANAESETSLHDDADDDDANDAHMSAPTRHSGLVSRLFGRRGSSLTTGDNKGRDDGEKCVANLHVSAGGLRKRVGSGLVRKRTSEPQPMHVHSGGAWRALRGFVIGRLAENEGGLVIDESGGGKANLKRTITASSLSSLRDTSDSFARYTLVSKKTLTHPTAINVVRLFRFSIPPDSLLSKAQARTGQHVIVHTLVNGRSIQRAYTLVGYSAPQGLLELAIKIYPEGALTSYLDGISIGAAVKLRGPLGDELLCKTPSVVNSFAGCWDHVGMIAGGAGITPFINLISHHVRKGPHVTRKGMSLRLLFANSTPLDVFYGERLDHLADESKGYFRVLHMLSKPSAEWDGLAGRVSEEAVRLSMPPPPGVCAVDWQNALSDITSVAPAKTATKMTTATEAVASNACQPGLVGVNLYGKHKSLVDLWSSAPADADGVPAEVVAGIEGGLESGSPAEYGGQNHNATPSLEMEVIASAERVTGAPRGDSEHPHSSAPRFAEGQQQLTTHALGDVGEDGPQSDSVVGQVTVSIEPAQTDDALAPAKTYPAKVALENAAALQDFVACIPVSTENTRIFVCGTPAFNSHVSAILRRMGYPPEVIVML* # PASA_UPDATE: g13592.t1, single gene model update, valid-1, status:[pasa:asmbl_5510,status:3], valid-1 NODE_306_length_27478_cov_41.3606 . gene 23902 25624 . - . ID=g13592;Name=g13592.t1 NODE_306_length_27478_cov_41.3606 . mRNA 23902 25624 . - . ID=g13592.t1;Parent=g13592;Name=g13592.t1 NODE_306_length_27478_cov_41.3606 . five_prime_UTR 25499 25624 . - . ID=g13592.t1.utr5p1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 25414 25624 . - . ID=g13592.t1.exon1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 25414 25498 . - 0 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 25164 25226 . - . ID=g13592.t1.exon2;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 25164 25226 . - 2 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 24970 25040 . - . ID=g13592.t1.exon3;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 24970 25040 . - 2 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 24722 24823 . - . ID=g13592.t1.exon4;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 24722 24823 . - 0 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 24386 24459 . - . ID=g13592.t1.exon5;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 24386 24459 . - 0 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . exon 23902 24174 . - . ID=g13592.t1.exon6;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . CDS 24126 24174 . - 1 ID=cds.g13592.t1;Parent=g13592.t1 NODE_306_length_27478_cov_41.3606 . three_prime_UTR 23902 24125 . - . ID=g13592.t1.utr3p1;Parent=g13592.t1 #PROT g13592.t1 g13592 MVQLKGIPAILSPDLLNAIARMGHGDEIVFGDANFPAETCAKNILVRADGHNIPALIEAVLKLFPLDQYVEKPVALMQLVPSDAAKGLKVPVWDTYRKIAREAEGKEVLFEDVERFEFYERAKKAFAVVATGEITHYGNIILKKGVI* # PASA_UPDATE: g13591.t1, single gene model update, valid-1, status:[pasa:asmbl_5508,status:3], valid-1 NODE_306_length_27478_cov_41.3606 . gene 19266 23634 . + . ID=g13591;Name=g13591.t1 NODE_306_length_27478_cov_41.3606 . mRNA 19266 23634 . + . ID=g13591.t1;Parent=g13591;Name=g13591.t1 NODE_306_length_27478_cov_41.3606 . five_prime_UTR 19266 19434 . + . ID=g13591.t1.utr5p1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 19266 19450 . + . ID=g13591.t1.exon1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 19435 19450 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 19692 19869 . + . ID=g13591.t1.exon2;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 19692 19869 . + 2 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 20170 20251 . + . ID=g13591.t1.exon3;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 20170 20251 . + 1 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 20497 20592 . + . ID=g13591.t1.exon4;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 20497 20592 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 21000 21320 . + . ID=g13591.t1.exon5;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 21000 21320 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 21576 21643 . + . ID=g13591.t1.exon6;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 21576 21643 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 21977 22103 . + . ID=g13591.t1.exon7;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 21977 22103 . + 1 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 22355 22488 . + . ID=g13591.t1.exon8;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 22355 22488 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 22751 22829 . + . ID=g13591.t1.exon9;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 22751 22829 . + 1 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 23003 23113 . + . ID=g13591.t1.exon10;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 23003 23113 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . exon 23379 23634 . + . ID=g13591.t1.exon11;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . CDS 23379 23438 . + 0 ID=cds.g13591.t1;Parent=g13591.t1 NODE_306_length_27478_cov_41.3606 . three_prime_UTR 23439 23634 . + . ID=g13591.t1.utr3p1;Parent=g13591.t1 #PROT g13591.t1 g13591 MASFEAEHDDAVEEKLINEEYKIWKKNTPFLYDLVITHSLEWPSLTVQWLPDVEQPEGKDFAIHRLILGTHTSDEQNHLMIAQVKLPTEDALVDTRKYDDERGEHGGFGGASGRIEVKQRIIHQGEVNRARYMPQNQTVIATKTPTSDVLIFDYTKHSSVPEPNGKCKPELRLLGHTKEGYGLSWNPAKEGELLSASDDKTVCMWDIKGTTKDARTLDAKSIYTGHAEIVEDVAWHGIHQSLFGSVGDDKKLMIWDTRSATTNKASHVVEAHTAEVNCLSFNPFTEFIVATGSADKTVALWDLRNLKRKLHTFEGHTDEIFQVLWSPHHETILGSSGSDRRLHVWDLSKIGEQQTPEDAEDGPPELLFIHGGHTSKISDFAWNPKEPWTVCSVAEDNIMQIWQMAENIYGDDDAEVPAADLEA* # ORIGINAL: g2076.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 14538 15752 . + . ID=g2076;Name=g2076.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 14538 15752 . + . ID=g2076.t1;Parent=g2076;Name=g2076.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 14538 15752 . + . ID=g2076.t1.exon1;Parent=g2076.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 14538 15752 . + 0 ID=cds.g2076.t1;Parent=g2076.t1 #PROT g2076.t1 g2076 MELIAPDIYKVSYDSDIRLGLKVQGTTEVVPNLFLAGAGASDKELVEFGKRKVDAVVSMGCEYVVWFLKTFCKNAAVLKYDFEDSVVTCIVDELDNIADFIHGHLSAGRCTVVFCRAGMSRSAAAVAFYLTKYHNMTLSDALIHIMQRRCIYINDGFCFQLYAKTTCLSLARTQHAGEFLYGRHGHTKNPTRDMPLYATLAAAMAKHDYWDILETEVYLIPVTSVSILFAAHRELFEVVGGSKSQHLKQIIDRGIDGFVPKINTTTTNSVAMMQTSNVLAHGKLDVVANLVNSATANRTANRTANGIANGNATSIVEHELNKCPNKELARKVATMLLTHISDQETLSNKTVCLCGQRLARFIRDVSDDILNDRCWESLGNRLDDCKKKKPKAMLNRLMDDLRAQ* # ORIGINAL: g2077.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 18579 19610 . - . ID=g2077;Name=g2077.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 18579 19610 . - . ID=g2077.t1;Parent=g2077;Name=g2077.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 18579 19610 . - . ID=g2077.t1.exon1;Parent=g2077.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 18579 19610 . - 0 ID=cds.g2077.t1;Parent=g2077.t1 #PROT g2077.t1 g2077 MKDCKAHAVAEKNDFQFAVQGLGGAKYGYCSMKSADFPSYYASLDETDRQFNEIVDEDKKRKHFLDIEGTPKMVTDAGFEGQFDVLVAILEAQTDVLKTMGYNEPDRKSCVFITNASTENKMSFHVTFADIVFNNYSEHILLASWLKAAFKSKYANLIEFVDWSVYSRNHLMRIAWSTKRGEVRYLLPIADDHNVKEHIDRYLITVPQNKKWHMTFNVVVPRWKSVAESATALTKKQSDGKKRRRTTTEPQSAEGWLTPALWMLNEPDNFEIADINGKYVNLRRINESHCRVCQRVHENVGISLQYNEKSKMCYLMCFRQHGKWIVLGPVDWGMMNLAKSMSG* # ORIGINAL: g2075.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 12921 13343 . + . ID=g2075;Name=g2075.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 12921 13343 . + . ID=g2075.t1;Parent=g2075;Name=g2075.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 12921 13343 . + . ID=g2075.t1.exon1;Parent=g2075.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 12921 13343 . + 0 ID=cds.g2075.t1;Parent=g2075.t1 #PROT g2075.t1 g2075 MELPQLTSVQQRLSVIYDRDGMQRDILDAICSPLDHTSVRDTAILNDYGLASLFQSSMYIATGPPSAGRMLRFAELAKQYLQTVPQTHHEPFTPTTLENFLIAAQQLDISIRMMLEMYRFDYSEDSFFLQDCVIWPRSVD* # ORIGINAL: g2079.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 22653 23267 . + . ID=g2079;Name=g2079.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 22653 23267 . + . ID=g2079.t1;Parent=g2079;Name=g2079.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 22653 23267 . + . ID=g2079.t1.exon1;Parent=g2079.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 22653 23267 . + 0 ID=cds.g2079.t1;Parent=g2079.t1 #PROT g2079.t1 g2079 MADNAADNLVDAANNLVDAADNPVDNPVDNQDSFMNDVMQLWEQRRADAYEGVLPMRLTFLPSHEFCTVCDSPIGKTNTLSWGVHTCGWAFCSKQECKEVCEQRRATMFQKTRWAEVLQTVDKPVTVCRTNGDLEHDWYVDGMLRPTEIDRPMVTVYKNVPSAGVLQKSVLVDDFLALQSVPPLTTGFGDATTGSADGHMQSHL* # ORIGINAL: g2073.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 5538 9305 . - . ID=g2073;Name=g2073.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 5538 9305 . - . ID=g2073.t1;Parent=g2073;Name=g2073.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 5538 9305 . - . ID=g2073.t1.exon1;Parent=g2073.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 5538 9305 . - 0 ID=cds.g2073.t1;Parent=g2073.t1 #PROT g2073.t1 g2073 MEFKPKLFNTAERLYTAIKQKQITTLASETVWLNQWVATEVAALVTPDAWSEQLTACCTHLLTTLGSLFVLLRITAASAPSPNDALARAKEELAANLNAVALLDYFQPGASFETLRDTVYADYAGRINAIGWAKELAALEPVEIEIVVRDPTFVDYKDIEAIADPTWDDGFRREVFSGIHASESLDAEYESVDILSTTGFSNMIAILFRSGHVTPVVDDFVRVADGNNDRKFGKQSSVQSIVALHTKIVEMNKLPPEEREALIQQTFDKSLLQVNGVHVNVYNELAATFDVAYKKNATADAETRQLVRRLQTISSNAFYSFDPPTKNGVSVQLTDAMPVVRSCFLRTALPIKKDPPLFQTRMGRPREVLSVIGIIVHDRPITTYRTDLIKSASKFKLGNRPGLLLFSEQTSFRKIVQSLAKQLSAAVYNTATRALMERGPRSYTVAWRSLWDWHLFNEKASYKNLPHQYSPLYGWAALLERAVFSKQFAPPAETATPTITGLRPLHLIELAPPTAQTIICGHELAKDPLIFADNSSNSKIKTCMVCGATLDGYVFIEDVKIEQTPASESVYIEDNSLTHTRLEEEVLMNEYRHAIRKMLEHTEKFAKLSGMRQFVGDSNLYFRENVMRWTVMLMEDCAAHMLLNKTQAPSASVLRPVEPTVILQSFSNRNDVDFALKSDVLVAYLSVVILINVDPNLLTEQKTINRADFESFRQSTTYKAACAVPGILLSGNERLAYAVYYVCKTMIKYKIWTGGASSVLTLLHSMLHALGMILEISADSTVLKILRRLLQQNYFEDTTLMKSVEVAVKAVKVIDITASRSVVRAGQYRPASDDTWMHVKRRMPPPKPTTWFYPNTADYICTNGAFHKFTIGLEVKCEVCGQPLGSNANVTRDSERKRQVLVVLARLICTKSPNYKHAPFEGKCKHCGMPDYPSDEDVRKHMDVKAVTAVIKEERDTHEQLVESAIKRNKTAAAEKIAMLKLAPPKEHWAKVAHELEILIVDEGIHIRNNATKYVYDAGDVADGKVLEGHPTFKQAVISVYQGGRKKTMFFGRYSLWQVGYTNEENVAVVNIVQSTVVTRQYSLIEKLRLLGSPYEFTSNPASVRVLYQRRLRSILRQINVALVQYRGNDVKTPTWMQQHRQSLETVNWGTPPVFSEWSLAYDTIVHNYGLAQEEGGDGSGGEFVDVRTMLKGFAVGNSLLTYFVGEWLRLFKTNKKLTHKSIANFVLDAIERTFEDNVVKHVDESVGADSLDNL* # ORIGINAL: g2078.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 19926 22412 . + . ID=g2078;Name=g2078.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 19926 22412 . + . ID=g2078.t1;Parent=g2078;Name=g2078.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 19926 22412 . + . ID=g2078.t1.exon1;Parent=g2078.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 19926 22412 . + 0 ID=cds.g2078.t1;Parent=g2078.t1 #PROT g2078.t1 g2078 MYRPKAGRSIKLYLDEQDVVKTVKLVRENEVVGIDAPTGSGKSTKLMVALARAFGGRAVCVVPTVVSAYSLRDYVAKLNPDLASNTHTAAEGDIRYNDSSRLVYATGGHIRRKLIGNLRQKLRTGQHSDEANHGNLFGFSIMVIDEAHMQTMDQEIIGSIWRYVRYNLGLPVPRLVLASGTMCSEILSEYRAPAFHTMTSVGYPVSVVYHNRDYMPAEPDLYKDVANLINTHFQQGYAPARQFPDTQHGFVGARQVPDTQHGFVPRLFPDTQQGFGAARQFPDTQQGFVAARRCFGQQQGFVQQAGQVPISIPTQVGDYTPPNPQATAARAVSQGRPSVGRTYIPRSQNNDVRGHTDNDVKRHTEIVARGRNPAWLVFVPGKAEIDLVRNNLIVDERLTVLVAHGDVPQDEMRRIYEPVAPGTVTVIIATNVAETAITIDTLTAIYDTMGERYGESSPSGGHRLALHPTSQASANQRKGRVGRTQPGVVYRMCTESGFARLPAQRPSEISRVPIHKVLLEVLDAGITSPEVLHPVLASASTSAAMELFKKLELYDGTEVTPRGSFIAQLPLGVRAGAFLDKWMAAHADDIFPGVVLACMIDCYGPSYFWLPRKPTGAAAAFYDEMLDAHYRKHLEGLAGPSDLDCFVNIWNEMLTKVNSPKRHNPLSFAAWCFKRSLNQKKMREVVTVARQVTATVQRAGHTVRTAPMPQSVIDKAAVILQQVYPTFVHIPGRCRPMYLESKETIGQYRLDTRGRFLDEFGIQGTPEKVIAMSTSEIVNGNNVMKWLSLYHRVAPARRNCFRLINITDSTVDSDLESYGSDSDESFLC* # ORIGINAL: g2074.t1 original gene structure, not modified by PASA NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS gene 9420 10484 . + . ID=g2074;Name=g2074.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS mRNA 9420 10484 . + . ID=g2074.t1;Parent=g2074;Name=g2074.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS exon 9420 10484 . + . ID=g2074.t1.exon1;Parent=g2074.t1 NODE_385_length_25153_cov_38.527_potentialcontaminant AUGUSTUS CDS 9420 10484 . + 0 ID=cds.g2074.t1;Parent=g2074.t1 #PROT g2074.t1 g2074 MLPTPSSEGLVRMKIGNEGKILMYVARDSWNVATQEDADWHGVVLDSTSLCKRIAPHVPIVKQPGFGQAMTVDDKREVVSMHGIVDGTMVRTFWSDGKWFHTTNSMLDAKNAFWSDPTMSFYDQWVAGMVACGREIDDLYDKLDKQMSYVWIVVHPHTRHVIKYDAPAVYFAGAVRLDGEERLDAAEVPADIPRLSSVPVNKCGFVEVSVGAPGRFNRIIWTTPEYRELQSLRGNTTNIDYQCVVVLKHGQEDAFVKAFPEFAENMQRMEQSVLKVVEIVHAHYMRWYVKKIQDEDCIMPEFKTAIAHAHKRYVYNRQVVTRDVVLSVLMGYSPKRLYAMTDLLRVPPRATESV* # ORIGINAL: g12534.t1 original gene structure, not modified by PASA NODE_3276_length_3850_cov_41.4834 AUGUSTUS gene 127 1483 . + . ID=g12534;Name=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS mRNA 127 1483 . + . ID=g12534.t1;Parent=g12534;Name=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS exon 127 305 . + . ID=g12534.t1.exon1;Parent=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS CDS 127 305 . + 0 ID=cds.g12534.t1;Parent=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS exon 561 1092 . + . ID=g12534.t1.exon2;Parent=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS CDS 561 1092 . + 1 ID=cds.g12534.t1;Parent=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS exon 1340 1483 . + . ID=g12534.t1.exon3;Parent=g12534.t1 NODE_3276_length_3850_cov_41.4834 AUGUSTUS CDS 1340 1483 . + 0 ID=cds.g12534.t1;Parent=g12534.t1 #PROT g12534.t1 g12534 MSKRTVVRSGHDVVRGCYRISQSRQCAVYLLGPTEHVTITNCKDCTIFIGAVARTLHVSRCARVTIVATCRRVSVAGSDECSLFLCCNTRPLLLDGTSRQIHFAPFNTFYAALGEHMEAAGVTPTVNLWDSVMQLVGTTQPPQWALLPPKDFSGFVVPFAAEGSTTANPCEVPEVYATALSERCARLVAFRGDVRRACQSDPTMSRLFQQAVERRFCDWLNETGSSRQLMDLTNMQQNLGSQVSLSGGLGNMPQSVAGSTASLASIGSNASSQAGWDNGRPRST* # PASA_UPDATE: g12535.t1, single gene model update, valid-1, status:[pasa:asmbl_5815,status:3], valid-1 NODE_3276_length_3850_cov_41.4834 . gene 1773 3667 . - . ID=g12535;Name=g12535.t1 NODE_3276_length_3850_cov_41.4834 . mRNA 1773 3667 . - . ID=g12535.t1;Parent=g12535;Name=g12535.t1 NODE_3276_length_3850_cov_41.4834 . five_prime_UTR 3513 3667 . - . ID=g12535.t1.utr5p1;Parent=g12535.t1 NODE_3276_length_3850_cov_41.4834 . exon 3413 3667 . - . ID=g12535.t1.exon1;Parent=g12535.t1 NODE_3276_length_3850_cov_41.4834 . CDS 3413 3512 . - 0 ID=cds.g12535.t1;Parent=g12535.t1 NODE_3276_length_3850_cov_41.4834 . exon 1773 3282 . - . ID=g12535.t1.exon2;Parent=g12535.t1 NODE_3276_length_3850_cov_41.4834 . CDS 2390 3282 . - 2 ID=cds.g12535.t1;Parent=g12535.t1 NODE_3276_length_3850_cov_41.4834 . three_prime_UTR 1773 2389 . - . ID=g12535.t1.utr3p1;Parent=g12535.t1 #PROT g12535.t1 g12535 MIAVQPSVSAMPPCPTGKMQLVSYEQASMEKILGFSIRVARNMWEPKPSDDDPEFLPYLHNIVYRTRCTRAVVATSMLYLQRLKGRFPQTGSPGCSQRLQLMALMAASKILFDDALTNKSWGKVTGLELGEINAMEVEFLGAINYDLHVTESDYRSFVCYVEGSMAVDGLVQSVVEVDQLKPVAASSASSTSSTSVSPVPSGRHTPTTSAVTGTTSHPSKQSVAALRTSSKAMTSPANKLQRQPSRIPVRVQPLQTSTQHNASNNLSTAASSYNYALTHVAKQANAARYAAPMPTTVATHARTANISNWGYDKCAGDIVSHSGTAIRMAN* # ORIGINAL: g11561.t1 original gene structure, not modified by PASA NODE_540_length_21567_cov_41.4089 AUGUSTUS gene 4821 20495 . - . ID=g11561;Name=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS mRNA 4821 20495 . - . ID=g11561.t1;Parent=g11561;Name=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS exon 20274 20495 . - . ID=g11561.t1.exon1;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS CDS 20274 20495 . - 0 ID=cds.g11561.t1;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS exon 18425 20085 . - . ID=g11561.t1.exon2;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS CDS 18425 20085 . - 0 ID=cds.g11561.t1;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS exon 10773 17964 . - . ID=g11561.t1.exon3;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS CDS 10773 17964 . - 1 ID=cds.g11561.t1;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS exon 5400 10442 . - . ID=g11561.t1.exon4;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS CDS 5400 10442 . - 0 ID=cds.g11561.t1;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS exon 4821 5168 . - . ID=g11561.t1.exon5;Parent=g11561.t1 NODE_540_length_21567_cov_41.4089 AUGUSTUS CDS 4821 5168 . - 0 ID=cds.g11561.t1;Parent=g11561.t1 #PROT g11561.t1 g11561 MGKKKSAAEPHEVFVMNNPLHRQGSNVSTASAASDSEHFFQDTKAPGRHTPRSKLVIAAIVAVVVVCAIVIPVAVVFGRSSSKIVCPAASASTSLGTVYSGNYMLGATGIYNPPSCALSTSSGEISVAWTAPSPGEYIFRSSVAGSTLYVRRLTCDGSLVACGTGAFLSFNVTAQDVGVLVLVADAPASASAVTLTVERTAIEVSGHMTALAGALSNPQSGASVDLGATTGTAASSGQASDSPAISAVVASSFGGNAKLDVQNKVVSVLQSPTPGEAPWYPDAVYPVVVVQGRFTLPGMQGQFDGQMALFYQSCRPNCSSASMQMVMDVASPMQWSPASIPGVDGGSWLNSLAPTTRSHVIVSSVAHVRNETGVIGSGGRRDVAGALPRMYVGPVPPGISFLSSGVLDSRGPLSPLGGVFSDSLFSAESVVKGRIPLAGEPSFSIDTNATISSGSPIFTPTAATGAAPPGTTIGVVGAGAQPQVSLAVPASINPLDGLQFPDLSAIFGSTFSFNNTNGTISLSARFPGPIVLPLFSGNWSHAATLTNIVFDVVLRLSANSTFPSLAAIKLGGALSVGGQSYAVAGAIDKDSGDYGLAFAMERAGTLSSALFGLVDEDSVFGSLQFNGSIHMSIGSRAFVVGNTAFPAGVKVALNAQVGSSLADRLRTLNRNIRATTFAVSAVFPWDGTGTWSMGLAVDELWMSPYLSMQSFALSFASESERMRVSGAVVAYLSPSVPLGEQISASISADHAPGEDFIFTGKMDGTWAPAAQAWLTVHDASVRIELSPYVFGRVRLVSIAGAAMLQFGNGTTTQLAVLASVSEGDYSLRADAALSIIDLGTFVRGVLGGSSAPAWFSSSLTLKGNMTLAIQTANTTSDAPSKSLFLSASASLGADMQATLSGLGNSIKSSGVSLYLAMPVVGATVRDIKLTVTASIAELRISPHLRLVGSKFVLNDATTASPSFAVSTVAELLVAGVESPLRFEVAGSVSTDTQTVVSLYGTLAGAWSPFAAAWVSLDSGVVNATFTRNANRTLVSGFAAVKGTPSFSYGAVSASTNLDMQIDVVTGDFYVRVGGIVVHSMDHILASALTDDLGGPVLSSTAAVSMGALFDVVVASRDYPGIASKGVVVHGQAVITGPLYEPMRHLNSELARGDVELYIKSPIKPASLADVSVRVSADLRPVRLAESVSIANVVVDMERLDAMDATLSTVVQIYLSDRSNPLVVELQGSFRNAASDALATSPPGTLVTSARMHGRVVGAIPFPNGRGLLKIASATVAVDLDVTLGTISAANVSFAAAGEISLGSSHVLAVSLSGALSPNMYDYAFTATVNASVDSFLVASLLSSAATLLSNTSLSIDSQTIPTSGHVLTAQSTPLSLGSAARVVFSTYDDTVHGVYEGVSIVATAMLSGDTFSPVYAMHPSVANSSFGLQVAFSLTGRYEPKFSLRCNIGELCLREKACVRNVLLDVRGRGTGVSDITVSGSLVLAISKSNNHPLVFGITAAFNSTSGSVSGRLSFAGASQSEWNPLGATWLSVTAMSASFALQFNPTRAIDVISVSGTCIALLGRTGDAATASMAVSVYSETGDWTLTAVGALAADLSSLTSTLWGSGTPPSVLRNFTVPFSASLNVTVSTHDDSSLGARAGIVVAVETNLATSFLNVIRKLAGSDGLSAASAVLNLYLPSASSSYTNAELSIGIRMTSIRLSPTVRLVGVTADVTALNSPKIAVSSVLEILSPNNPDVVVFSTQGSLDEIVDESLYDAYGEDPLLYSLSLAGTLVGEWRPYASKWMSISNAKGNAVFQTGGIGVSGATLVSAAFAGTPKFSFATFTTQSRVVGIARSNMLDFSLKSTGVSIASLSGVMQDVVFGTANVTAAADVQRFATLGEFSVVAAVNVSVATFNDTFSDVESGLIVDATATLTGGVLKSIGSLGFRVPDGRVGMKLRMPLRPQSAADVTASMWFAADTIVVSDRLRFSATRVTVASLYPLVMLASSQVDLVLGSADPLSFVATLSASIAATNGSDIVQLTATQTSAWTPPGVGKWLTIAGGSLRATIVRSPIDGRKPVLSGLVTCESQALLTLGTDVRPANLYASASLVADSSTGFWAVSLGSIDSDRFEALFGASTGSTLPAPLYDALSALSWDSSMNVTYAAYASASYGIDAGLTVQVRASLSEGAIATLLRSVGVSATKGTTLTIVLRVPTNMSADATRLSLRLGGGFDFGTSGLVSLREVVVDVSRISPPSARMSSVVELSLGEQGAPLRVRIDGLVGDSPLGIVAGEIVSATGTLLGTWTPPSASWLTVRSCYANITFAPGRRPWFRGARLDCAADMLVGATLVSTSVAVSVGDGGSGFSLRVAAVAIPSMSSLFAAITRSSSPPSWLPDMKLLGAANITISTFDAPFQSIRAGFSLVATVTLPTVIQTQVTNLNAKATDVKFSLDLFAPMNATRADDVRFAFGVSAQEIRLSPNVRLTSINVGMTQLNPPTVSAQTAVEITTGNSTLVFLAAGTGTQLSTAASRIVVNGTQVGTWRPMGLQWIEISNARLSMAVLPSGANRLAALSLDGDVRVVLPEALIAATADARQPPPVRVSATFNPSTMDFVVTARGIQVRSMSDILSVFFGTVVLRESTPPLLADVGLQTPSIDLALASAAWNGAREGVTVSSRVVGMGSVLEPINAMGSQVPAADFDMSFNAPLDTLWKRTLSALANATIDLTGVSIRVNPGISMAITDIYLNVKNLLVPNMRVGGIATLSLKDNPYPLKVSLGGMYNASAYVMALRGRLVSSWSPFNVTWLNVTAADAYVEFDLSDDAPRVLSELSMNGTLAMSHKGIIDTYVTTLTFALSVAQNGADFWIRGTGTLNANIDVISRNVLTNVTINNTPQLIKDTIVIGDLSTTVYFSTFDNGFEGVLKGLTIQVQILAPNSISTALQNMQNSGFSGNNIFLANFYCSVNMPIASGRIGDVKYKLSYTLSAPINLSPMLRVYYMHVDVTNIANPALNLLGVVETTVFGSKAPLRFRVQGGYTLFTTGTQLVTLQGDLADVWKPFDAEWLSITNGRMYLGIVPSNSSGNKVSSLYFDGSARFQLNDLSAAVSTRVDVDPVTSQFALRASGLGVASISELIRYVAGAYSTPAILTPVTLARPTVNVSIASSGRFGVSPGVTLDAKVAIDGDLLKPFTRVGVSGLDGRNGSFGLSLYMPALNTTLGGVQVVLTASIPALALSSTVQLSGVYLSLRNLFRPVLSLGGTLTIAAGTSVGDGPLVFSVAAAYDATDAATLTFAGALVGRWRPFGLTWFSIDACAVSAIVQSATDDGLIRAAAARIDFGGSFSLFNGSTVGMRFAGRHGPGASLFWIRATVSTMSDLGRFFQSALGLKSAPSFLGDFDIATPLQSSSSIGSTLSIALSDAPEDGVREGVSLVAFARVGGETIKKISSLGISVANATFLLSCRFPLTKPNLTNVEFFLRTDVKEIRLSSFVRFSSLLVSVDRLDNPTLSVSTAVDVTLPGDTTPLRFQVAGSLAGAAVANSTTPFTLSGALLEPWRPLGLDWLTIDRAVMNISGSSSRIARIGVSGAATVRLGQSTTAGLSVDVSMDGVTGNYNITLMGVAVTDFGDMVRGIASWGAGEIPAMIREFRLPAAAQANLSISTLTGYSISVRAQLGSAVVQHLSPFGRSGLPGIACTVTLSMPFASLDPAKLRMAVMADMTDVYLADHVRLVSVGLSIQGLFPPTFALETVVDLYAVQDDPDVPPLRTQLITIYEQSRRLEIVGRLVSTWTPPHAAWLQIRGADVNATFVLDRPDLERRVSFFASFATSAGGNSSLASGATVSGSIVDGPSTQVVILARQVPVIDIGVIVAYYITKAPVTLYGLSNPVDGRIDVEIATQAFLAADGTTFKSPGLYMGASVTCYDGILLMALRALKPESAQFSSRINLYLPVFAQPDRQADGIWLSLLVSGSMNSLPGARWAGLELRASWDSLYLNPTITLTSSLSVDIRYNPEPLVFYVRAQYVSQKPLIVQGGMLGDWRNPFNAAAWLGISNVSMTLVVDTSGVYTPTLRTLTLEGNLRVAFDAANPTILRFRGDVANLTDFAVAVSAVSAKSIASILPVVTGRAGAVPAMVSSLSNIANGARVVLSTYTYSDVVGGISRKFDPGFTFDVAVSATSGPMLDLVNVFRVGGAASRVDFTGGVYVPVFDSVSKDKLRLYLTAASVASSLTSRLQYAGLYFDIQFDMFSAAPSVYIGTQLSVLFPAGLDYKSSNGTIVKYQVTGAYTAADGRLVLSGSIVGEWNNPLGLGNWLSVRDCTINVVIETRPTIQMAELYVSIGAAVRFGGYVTSAKAEGRAARQFTGFMVSLSVSSVQNLAAVVMSITNTASVHDVIKTLILPVDVSVFVTVSNYDDNALGIETGVKLGAIVRITSGIVMDAMRLIDKTATDARYTLSMLIPVFDVDPLKIRFQLTTPPIAFTPTFGLLGLTLTVNIAAPPTVSASTGIYLNLTNNPVLQFWVEGTFKTYGSVVLSGGMKGMWLNAFGVPGLSIGNVVISVEFGQTYGVGLGGMVVIGNVGISLYGRVTWPDMRDLFFAGTIANNVTAMSFADLALWWNAATPANIARLGSSQYSASWAFRSASFYFAPMDGVFNQIRYRAGFGVRAEMTVFGYILSAEVVIGGKNLGWIKIPDVSFTFVFASASLSQQISNTLGTQLPGSITDLSDLEKSQILKEYDVSKPFFSLERFAITDFSFSNIATGRLPTLQIDFYLFGKLRNIDFQISIPDIFKSTFGSIMSIIRQFFKLPQCIRDADCFNPSLCVCEAWQQAKGACPDGCYGDCSFFRCTYG* # PASA_UPDATE: g11560.t1, single gene model update, valid-1, status:[pasa:asmbl_8058,status:3], valid-1 NODE_540_length_21567_cov_41.4089 . gene 1817 2880 . + . ID=g11560;Name=g11560.t1 NODE_540_length_21567_cov_41.4089 . mRNA 1817 2880 . + . ID=g11560.t1;Parent=g11560;Name=g11560.t1 NODE_540_length_21567_cov_41.4089 . five_prime_UTR 1817 1914 . + . ID=g11560.t1.utr5p1;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . exon 1817 2004 . + . ID=g11560.t1.exon1;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . CDS 1915 2004 . + 0 ID=cds.g11560.t1;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . exon 2218 2319 . + . ID=g11560.t1.exon2;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . CDS 2218 2319 . + 0 ID=cds.g11560.t1;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . exon 2528 2880 . + . ID=g11560.t1.exon3;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . CDS 2528 2665 . + 0 ID=cds.g11560.t1;Parent=g11560.t1 NODE_540_length_21567_cov_41.4089 . three_prime_UTR 2666 2880 . + . ID=g11560.t1.utr3p1;Parent=g11560.t1 #PROT g11560.t1 g11560 MAKRGKYQYTRLGDGNDDFTDEQFVRPPPKVPIKAILLATALFLFGSLFIVMGSLIMTGVIETSMHDRAIPFLVLGSLLFIPGFYHVRIAYYTWKQYPGYSYDDIPDFD* # PASA_UPDATE: g11559.t1, single gene model update, valid-1, status:[pasa:asmbl_8059,status:12], valid-1 NODE_540_length_21567_cov_41.4089 . gene 271 1374 . - . ID=g11559;Name=g11559.t1 NODE_540_length_21567_cov_41.4089 . mRNA 271 1374 . - . ID=g11559.t1;Parent=g11559;Name=g11559.t1 NODE_540_length_21567_cov_41.4089 . five_prime_UTR 1085 1374 . - . ID=g11559.t1.utr5p1;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . exon 1012 1374 . - . ID=g11559.t1.exon1;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . CDS 1012 1084 . - 0 ID=cds.g11559.t1;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . exon 561 682 . - . ID=g11559.t1.exon2;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . CDS 561 682 . - 2 ID=cds.g11559.t1;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . exon 271 396 . - . ID=g11559.t1.exon3;Parent=g11559.t1 NODE_540_length_21567_cov_41.4089 . CDS 271 396 . - 0 ID=cds.g11559.t1;Parent=g11559.t1 #PROT g11559.t1 g11559 MGNLMQIIKKDQKGSTQDLFLDFENAQPTESEMQVHQFVADILNTTHNLLEELRAYTGCGDAIRQAISHPSKDTEENAWNAVCPQVEKLKSFYEYSGQLGGLWWLV* # ORIGINAL: g8192.t1 original gene structure, not modified by PASA NODE_1483_length_11019_cov_245.545 AUGUSTUS gene 2676 3444 . - . ID=g8192;Name=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS mRNA 2676 3444 . - . ID=g8192.t1;Parent=g8192;Name=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS exon 3309 3444 . - . ID=g8192.t1.exon1;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS CDS 3309 3444 . - 0 ID=cds.g8192.t1;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS exon 3140 3218 . - . ID=g8192.t1.exon2;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS CDS 3140 3218 . - 2 ID=cds.g8192.t1;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS exon 2984 3060 . - . ID=g8192.t1.exon3;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS CDS 2984 3060 . - 1 ID=cds.g8192.t1;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS exon 2776 2855 . - . ID=g8192.t1.exon4;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS CDS 2776 2855 . - 2 ID=cds.g8192.t1;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS exon 2676 2684 . - . ID=g8192.t1.exon5;Parent=g8192.t1 NODE_1483_length_11019_cov_245.545 AUGUSTUS CDS 2676 2684 . - 0 ID=cds.g8192.t1;Parent=g8192.t1 #PROT g8192.t1 g8192 MNVSAYANISHITSFDTVFVEACRDASSHGAVLTPSDVYVYGLDVVFVEMCRNASRCCSCAIGCIRVRAGCGVREIVSLCVDVLFLCHRMRTCTRDVVFVEACRESVEVLFLHRRMRTCTSWMWCL* # PASA_UPDATE: g8193.t1, single gene model update, valid-1, status:[pasa:asmbl_1742,status:12],[pasa:asmbl_1743,status:12], valid-1 NODE_1483_length_11019_cov_245.545 . gene 3986 11016 . - . ID=g8193;Name=g8193.t1 NODE_1483_length_11019_cov_245.545 . mRNA 3986 11016 . - . ID=g8193.t1;Parent=g8193;Name=g8193.t1 NODE_1483_length_11019_cov_245.545 . five_prime_UTR 10943 11016 . - . ID=g8193.t1.utr5p1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 10847 11016 . - . ID=g8193.t1.exon1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 10847 10942 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 9300 9362 . - . ID=g8193.t1.exon2;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 9300 9362 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 9092 9186 . - . ID=g8193.t1.exon3;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 9092 9186 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 8648 8941 . - . ID=g8193.t1.exon4;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 8648 8941 . - 1 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 8146 8513 . - . ID=g8193.t1.exon5;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 8146 8513 . - 1 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 7659 7975 . - . ID=g8193.t1.exon6;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 7659 7975 . - 2 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 7293 7460 . - . ID=g8193.t1.exon7;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 7293 7460 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 6512 7177 . - . ID=g8193.t1.exon8;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 6512 7177 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 5524 6370 . - . ID=g8193.t1.exon9;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 5524 6370 . - 0 ID=cds.g8193.t1;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . exon 3986 5298 . - . ID=g8193.t1.exon10;Parent=g8193.t1 NODE_1483_length_11019_cov_245.545 . CDS 3986 5298 . - 2 ID=cds.g8193.t1;Parent=g8193.t1 #PROT g8193.t1 g8193 MERVAGAIERAQRGEDTDDIGKLEDDCSFLANDAHLACNDGSKAIARGSSNTEAFDVFLNSDQTLCWEKGREPKDWKSSAGWVWVYVSATTTKSGQRSVRFNCHGVVACSRSSDDGCKVVALRPRTGDHGKEVEKKQVGQSCPTCHLGTLRHIKCKAVLRRIESNETSTVEHCGIHHHPKPLQLKATPTENAQLATLVTAHGGSLRAKKLQTGGYGVTAYEMSDAFGDLSYLRHTVRTVSTKIFPLKAFKRDGFWVGLKQLKATFPLSFPSGMPHLCIFDESMRAAFLRAVLAPIIGEQHPAFYEADGRQWKMALLTDATYSYFKEENAYLCMSSVFCTVLKRWRPICMTVMSGLSHEDYLNHFTTLFNAIPDEHIDELQSIATSVVDFSEAQLEGFIRAYVARKSAWASARGLPYDEAALREEAMGAIRGCEFHYKQSATRVSRNHNVVPFRCSEDFLVCTNELLEITNTDDYDATIQRILATYPLSKRWVDWWNRPGVRGLIFPAHMYMSADQQEKAPSTTNAEESLHNDIHTSVGLDFPLIEGVGHLVGYAATFEKDYQRELVGAKTRYNGDRRADKPGNQLRKTTKDFVNDGRAPDTSAALLNGTLFSPLPGRARANARTPLQSNRSPGRPPGSRNLIAASNHGLNYPGFQFLDNSCYFDATAELLYAFYCNGGERIFSKFSAVLSSVASTVGIALLVNVFSRRRNDTPANTSSEKRQEIDNTLRDEVLQYVRDTDPRASLESRYNSPWNWLESLFRETGNDVKKVMFPEIEETLSCSNCKDEFTHRVIQKGPVIVPEGLDGADDLAQFLNSGGFVKQRTGKMTCPMCKDFSCPSRRAMCGVPELLVLERNVMDGPNRNHVIYFPEVLTVYETKYHLFGHVLSKGGRGKHYTAMFCTKNGYYDYDDIRADMQCQLVSNTRAPKSFSGALLNTTLTFYVQEHDFVSGRNVFSQLTPSKEVPTSTGMQEDDDSDLDNFVIRSNQSKRQSIAPIGVTSTTSDERGMPTAAIGVEGESGAHGTDTGIPVGFANVGLSCFMNVALRMLLAIPGLVAAITSEAEIEFNVSSDGLVCVRALAKLSRLMSEQSRSDTLSKAQLEPILAECLSPHQAATFKTPLQQEDAEEHLRKLITLLDGHAQLYPDGPLSMFLQRSLRGCCLSRLCCGCGNSSVANSDLLVQITLPLADVTGKTSLESLVESYLSSETLEQRWRCGTGGCALETTKTFEWVTPSALVFTLGRFQFDETSRGRKMDTDVAIPRSLALRQASDESLGGPPKLYKLQAVGTHIGKSLNGGHFVSTMEQDGRFFFCDDAWVVEISEADMVQGYRGRLRNCTTPYMLLYVLDEPEPAEREHTAKVRRVDGAGASVHDSPSPVSDPLPLPLLQPPQPPIMETRSMRLRRASNRKLQ* # PASA_UPDATE: g8191.t1, single gene model update, valid-1, status:[pasa:asmbl_1736,status:12], valid-1 NODE_1483_length_11019_cov_245.545 . gene 332 2621 . - . ID=g8191;Name=g8191.t1 NODE_1483_length_11019_cov_245.545 . mRNA 332 2621 . - . ID=g8191.t1;Parent=g8191;Name=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 2616 2621 . - . ID=g8191.t1.exon1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 2616 2621 . - 0 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 2433 2523 . - . ID=g8191.t1.exon2;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 2433 2523 . - 0 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 2253 2340 . - . ID=g8191.t1.exon3;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 2253 2340 . - 2 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 2077 2155 . - . ID=g8191.t1.exon4;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 2077 2155 . - 1 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 1906 1983 . - . ID=g8191.t1.exon5;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 1906 1983 . - 0 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 1554 1646 . - . ID=g8191.t1.exon6;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 1554 1646 . - 0 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 1405 1481 . - . ID=g8191.t1.exon7;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 1405 1481 . - 0 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 1198 1316 . - . ID=g8191.t1.exon8;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . CDS 1295 1316 . - 1 ID=cds.g8191.t1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 1007 1058 . - . ID=g8191.t1.exon9;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 566 788 . - . ID=g8191.t1.exon10;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . exon 332 440 . - . ID=g8191.t1.exon11;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . three_prime_UTR 1198 1294 . - . ID=g8191.t1.utr3p1;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . three_prime_UTR 1007 1058 . - . ID=g8191.t1.utr3p2;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . three_prime_UTR 566 788 . - . ID=g8191.t1.utr3p3;Parent=g8191.t1 NODE_1483_length_11019_cov_245.545 . three_prime_UTR 332 440 . - . ID=g8191.t1.utr3p4;Parent=g8191.t1 #PROT g8191.t1 g8191 MLCLWKRCRESIEGAVRAPSDAYDCAMDRLDVVFVEACRESIDGAVLAPSDRTTVPLRAGCGVCGSVSWCVEVLFMRRWMHTCTSWMWCLWKRVVMRLISAVLAPSDAYVHELDCLWKRVVKASRVLVLAPSDAYATVYELSVLYYLWKRVMMRRGAVLAPSGVRVRAGCGFREIVS* # ORIGINAL: g9882.t1 original gene structure, not modified by PASA NODE_3582_length_3161_cov_38.9064 AUGUSTUS gene 310 3018 . + . ID=g9882;Name=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS mRNA 310 3018 . + . ID=g9882.t1;Parent=g9882;Name=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS exon 310 429 . + . ID=g9882.t1.exon1;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS CDS 310 429 . + 0 ID=cds.g9882.t1;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS exon 721 781 . + . ID=g9882.t1.exon2;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS CDS 721 781 . + 0 ID=cds.g9882.t1;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS exon 1038 1199 . + . ID=g9882.t1.exon3;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS CDS 1038 1199 . + 2 ID=cds.g9882.t1;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS exon 1383 2098 . + . ID=g9882.t1.exon4;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS CDS 1383 2098 . + 2 ID=cds.g9882.t1;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS exon 2425 3018 . + . ID=g9882.t1.exon5;Parent=g9882.t1 NODE_3582_length_3161_cov_38.9064 AUGUSTUS CDS 2425 3018 . + 0 ID=cds.g9882.t1;Parent=g9882.t1 #PROT g9882.t1 g9882 MADCILREADASSDGRIDFDEFRGMCGRHPEVIGALTLTQVKGIDLDTSHGKNNDGGLFAPGNREESIRSNRSGYRRNDSVRSNTHQPTKGQFGREGENSVRSVRGIPSNANTQGAHFQAVDVPPGADELESQGVAKRRRLWYLWFEHGNKLVFLAVLVGALLALFITSFLKYYNDDAIYNAIGPSVAVSRGFASVLALATVLMLPPVCRTTLALLRSIPFFVRVVPFDSALTFHRYLGYSLVVAVAGHIAGHYKTFYELTIIPYEQSNAVLGKNIFSSQPTYTYLCWETLPGATGHLLLVTMAVIIGGTRFRRTHFNGFYYSHHLFIVFYALLLAHGQSAWLALAKYQWFFIVPGFIYVVERVQRLRRKLSSGRVYKAVLHPGGTLQLIMKRPRGFEYTPGQWVHINCPAISRFEWHPFTLTSSPHQAFLSVHIKGLGDWTNALHKHFESFENYSVADAKAYMKALARGDAATSSQSLNNDDTESVASRRSSVQLGEAHSDAALFRSKAFATGSGALPADALEMSVRSTVAVPPDRTGKFRVLVDGPFGA # ORIGINAL: g7728.t1 original gene structure, not modified by PASA NODE_2021_length_8067_cov_41.8472 AUGUSTUS gene 3543 6992 . - . ID=g7728;Name=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS mRNA 3543 6992 . - . ID=g7728.t1;Parent=g7728;Name=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 6144 6992 . - . ID=g7728.t1.exon1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 6144 6992 . - 0 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 5818 5939 . - . ID=g7728.t1.exon2;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 5818 5939 . - 0 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 5497 5634 . - . ID=g7728.t1.exon3;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 5497 5634 . - 1 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 5247 5350 . - . ID=g7728.t1.exon4;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 5247 5350 . - 1 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 4986 5092 . - . ID=g7728.t1.exon5;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 4986 5092 . - 2 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 4616 4765 . - . ID=g7728.t1.exon6;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 4616 4765 . - 0 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 3898 4446 . - . ID=g7728.t1.exon7;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 3898 4446 . - 0 ID=cds.g7728.t1;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 3543 3653 . - . ID=g7728.t1.exon8;Parent=g7728.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 3543 3653 . - 0 ID=cds.g7728.t1;Parent=g7728.t1 #PROT g7728.t1 g7728 MSAAASRTRVTATRASAPPPPTDNSDDDIYADADEDAPQGIQPQTVKIASTSTAAPLAKAAVQMVPEDAPSGDDDADYDGEFDEEIDYDDDDLDEDEDAADFNWEDARGDFTKQLNAARNGLTVRPNAAASAPPTKAAKTTLQPNEKVFTKYYTRINVERYDGPALSDSVTNRMLETTRRSDNDRLRVTDKSDRATTEQVLDARTRMILFKLLSHNFIDQINGCISTGKEANVYHAANEAGEEVAVKVFKTSILVFKDRDKYVTGEFRFRRGYCKSNPRKMVKVWAEKEMRNLTRLHTAGIPCPQPLLLRNHVLVMRFIGKEGWPAPRLKDADITEDKARELYLRVVKLVRTMYHSCRLVHADLSEYNILYFKGDVYIIDVSQSVEHDHPHSLEFLRKDCTNVTDFFSKHKVHTMSVRSLFEFVTDPSIPEDRVDEYLERKQMELDSSAPSAAALVDEEVFKKSYIPRTLDEVIDAERDVGRLQRGETSELLYQSVMGMKTLAVGNNDDAGGDASAAAEPPDASKKAVKFSSAAKPEKKAAKPAPKWEDSFVSEGASKGKGAPDMDTAGDTTANIGKGGKGAPSGGSPRKSGKAAENNEGDESDDGSDDESEQNDASGRNDAGEDVDGSASDASSDGDSDDDDVEGGEGGEGGEGLDGAPKFVSTGDPKLDRKLHKKAVKEEKREKRKDKIPKHIKKRKEKVSKAKGKS* # ORIGINAL: g7727.t1 original gene structure, not modified by PASA NODE_2021_length_8067_cov_41.8472 AUGUSTUS gene 260 3272 . + . ID=g7727;Name=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS mRNA 260 3272 . + . ID=g7727.t1;Parent=g7727;Name=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 260 1444 . + . ID=g7727.t1.exon1;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 260 1444 . + 0 ID=cds.g7727.t1;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 1644 1757 . + . ID=g7727.t1.exon2;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 1644 1757 . + 0 ID=cds.g7727.t1;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 2014 2154 . + . ID=g7727.t1.exon3;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 2014 2154 . + 0 ID=cds.g7727.t1;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS exon 2526 3272 . + . ID=g7727.t1.exon4;Parent=g7727.t1 NODE_2021_length_8067_cov_41.8472 AUGUSTUS CDS 2526 3272 . + 0 ID=cds.g7727.t1;Parent=g7727.t1 #PROT g7727.t1 g7727 AQRCQQHLADTLKGLGVKVHEVKDVLTSGCDSDIRQRIELENLAATALRYVLDEDSDGTLVTDEERKLLGEEYKRGVLQAMSINQLIDIVLTRPTITLSKSSINHALASECVSFRPLSNLIFTRDIQISTPCGVILSRPNAPQRQPEIEVLRVCLHRLNIPILAEIPEPATLDGGDFILAGSDLCFIGVGARTNERAARFLMEGDLLGTRRVAVVRDIFDRSQERLHLDFVFNFIDERVVILLESVAHAGSPLRRLVDEYAVDPLPHTSASVPAPTQLGSSSPSKRRYRLVRQGIDFHEYLVDQGYDVIVLPDRRASHPIHILNIGGGHLIVEDEQTARVLAADTRFKGRIRLLTSPRNGSREDGPMWIGGVRCLTQVLLRKHTLDRSADAAKMASAGQGLASNRIVPCAHTGDQSTNTVLMVAPTAFYQNLQAAVDNHFMVSNVSLTKQQIQAAALAEFSLLHKRLCDKGVRILLHTHEAYHDTPDAVFPNNWFSTHATGDCLAAGSKTAPRTLILYPMKAVNRRKERRQSIIASFAGYYDRVVDLATEGEAAGKYLESTGSLVLDHIKRVAYACESERTNAELARKWAALSGYKLCLFSAADSADRIIYHTNIVMSMGTKVAIVCVECVPEGSGREALKSSLAECGRDVVEISLDQMMGFCGNVLEVLDGAKQPLMVMSDTAYGNFTRGQLTRIEAACPGGIVRASIPTIEQIGGGGVRCCIGELF* # ORIGINAL: g2284.t1 original gene structure, not modified by PASA NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS gene 2409 2954 . - . ID=g2284;Name=g2284.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS mRNA 2409 2954 . - . ID=g2284.t1;Parent=g2284;Name=g2284.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS exon 2409 2954 . - . ID=g2284.t1.exon1;Parent=g2284.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS CDS 2409 2954 . - 0 ID=cds.g2284.t1;Parent=g2284.t1 #PROT g2284.t1 g2284 MATRTGAVLIGSGAQSFAELRRHGIDVGLFASFEHMTLTSERSVRGIMSRVNALVVQAAGTVVAGRLVLETEETIDNIVAAINNIVSGIDRLPGKVPVVFFVDSTDRDINIAVDSYFADVVAETWQYVDHAQLRPQDLDKVLDVIRFLSGQTRPTALAILCNRALNRPVAVSYLPCSELYC* # ORIGINAL: g2285.t1 original gene structure, not modified by PASA NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS gene 3445 4150 . - . ID=g2285;Name=g2285.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS mRNA 3445 4150 . - . ID=g2285.t1;Parent=g2285;Name=g2285.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS exon 4120 4150 . - . ID=g2285.t1.exon1;Parent=g2285.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS CDS 4120 4150 . - 0 ID=cds.g2285.t1;Parent=g2285.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS exon 3445 3851 . - . ID=g2285.t1.exon2;Parent=g2285.t1 NODE_2603_length_5719_cov_65.3019_potentialcontaminant AUGUSTUS CDS 3445 3851 . - 2 ID=cds.g2285.t1;Parent=g2285.t1 #PROT g2285.t1 g2285 MASTVALVSFGRQPANFAKSFQNGLDRSGCTTLKAFALASTQRLDHIIAKLPLDRKSCHTLLAKGILDGTWVNLDTVPTRSEQLRARSRAEERARAEERARVKEWERAEQLARAEERKKIIGMGLLGGAAVFVFLNNIFDSTRRV* # PASA_UPDATE: g14365.t1, single gene model update, valid-1, status:[pasa:asmbl_9368,status:3], valid-1 NODE_786_length_17703_cov_26.3729 . gene 115 1016 . + . ID=g14365;Name=g14365.t1 NODE_786_length_17703_cov_26.3729 . mRNA 115 1016 . + . ID=g14365.t1;Parent=g14365;Name=g14365.t1 NODE_786_length_17703_cov_26.3729 . five_prime_UTR 115 210 . + . ID=g14365.t1.utr5p1;Parent=g14365.t1 NODE_786_length_17703_cov_26.3729 . exon 115 1016 . + . ID=g14365.t1.exon1;Parent=g14365.t1 NODE_786_length_17703_cov_26.3729 . CDS 211 693 . + 0 ID=cds.g14365.t1;Parent=g14365.t1 NODE_786_length_17703_cov_26.3729 . three_prime_UTR 694 1016 . + . ID=g14365.t1.utr3p1;Parent=g14365.t1 #PROT g14365.t1 g14365 MATFSNRYQLDQNRYEEYISTRISRTAAERMALLDWRQQFASSRETVIILQQLRNAPHATLNEFCDIVSQVCNIPVRGDRAIPYFLGQWTNVVAWGQVSDEVADRFAALYMHDKIRISKCELLVYQLSGTVLNMPVANSPTDITANDRVYWTPCTVSVAG* # ORIGINAL: g14369.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 7412 8227 . + . ID=g14369;Name=g14369.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 7412 8227 . + . ID=g14369.t1;Parent=g14369;Name=g14369.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 7412 8227 . + . ID=g14369.t1.exon1;Parent=g14369.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 7412 8227 . + 0 ID=cds.g14369.t1;Parent=g14369.t1 #PROT g14369.t1 g14369 MKTPQDQHQQFLPRDVEWLSMVADLGFDECFVVISESYPLVLFRETFRCGGVEYGLVTWAVCVGSEGFLAELATKTRAARKLNAVSLPLSIPPPVVTDLTPASLRDASTEANIRAALRSLLRASFQGQKTAGVRDVQLSQTTIATLSGFDRKEIHASKYERYPTYTFAWHEKSEGVAGLVVLYGSIAQEYRTAAEDEQLNKTLLTVMATASDRAAAGEFSATVQLDWTAAPSVVDVMKARGFELQHPYLNPLLICGPKQQDVQLTLSWWRV* # ORIGINAL: g14367.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 3672 3965 . + . ID=g14367;Name=g14367.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 3672 3965 . + . ID=g14367.t1;Parent=g14367;Name=g14367.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 3672 3965 . + . ID=g14367.t1.exon1;Parent=g14367.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 3672 3965 . + 0 ID=cds.g14367.t1;Parent=g14367.t1 #PROT g14367.t1 g14367 MWSGIRGEPDLFYGLSGASVIVPLFCSLAGMFLPKVWIVLRGNGDRTAHPTPVDNWGESDGRRNGNGFNPRSPLTPPHPPARPARRAAASRPPTTTA* # PASA_UPDATE: g14370.t1, single gene model update, valid-1, status:[pasa:asmbl_9367,status:12], valid-1 NODE_786_length_17703_cov_26.3729 . gene 12981 13589 . + . ID=g14370;Name=g14370.t1 NODE_786_length_17703_cov_26.3729 . mRNA 12981 13589 . + . ID=g14370.t1;Parent=g14370;Name=g14370.t1 NODE_786_length_17703_cov_26.3729 . five_prime_UTR 12981 13035 . + . ID=g14370.t1.utr5p1;Parent=g14370.t1 NODE_786_length_17703_cov_26.3729 . five_prime_UTR 13191 13210 . + . ID=g14370.t1.utr5p2;Parent=g14370.t1 NODE_786_length_17703_cov_26.3729 . exon 12981 13035 . + . ID=g14370.t1.exon1;Parent=g14370.t1 NODE_786_length_17703_cov_26.3729 . exon 13191 13589 . + . ID=g14370.t1.exon2;Parent=g14370.t1 NODE_786_length_17703_cov_26.3729 . CDS 13211 13453 . + 0 ID=cds.g14370.t1;Parent=g14370.t1 NODE_786_length_17703_cov_26.3729 . three_prime_UTR 13454 13589 . + . ID=g14370.t1.utr3p1;Parent=g14370.t1 #PROT g14370.t1 g14370 MPRTTAVLAFVALFVLSLSVAAQAGPIAYAGCQTGCNTAAVSCYISAGGVMGVMSIPVCNVGLGSCMATLCAPALLAPTP* # ORIGINAL: g14368.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 4112 6706 . - . ID=g14368;Name=g14368.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 4112 6706 . - . ID=g14368.t1;Parent=g14368;Name=g14368.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 6128 6706 . - . ID=g14368.t1.exon1;Parent=g14368.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 6128 6706 . - 0 ID=cds.g14368.t1;Parent=g14368.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 4112 6007 . - . ID=g14368.t1.exon2;Parent=g14368.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 4112 6007 . - 0 ID=cds.g14368.t1;Parent=g14368.t1 #PROT g14368.t1 g14368 MSVNTAGAAAPPWKDVLAWAFDHMLIPTMVFSVKTPTVKPAVRLDHWARIVGGYYSDFVSRAHDQPVDSTHPAHIKRAMDAVVLVAVHVMPMTTAKVTALSPKDHAEYVLRTLHIARQVVLADAPLLLEAIRADDERRIPCDGIVATCKVHVIRAILNAHKYPDPLEEDTMARRLYAGFRSMYDDAFRKERGELGDETWRIAFVRSILAYFERDETSFETSFGSGGALTAEAAQVTIAFSTFVGERVLHAPHEEGGTLAHLFARNVMLEFGVNAITSSLRVQDVFLRTNFASLFASPGPNGSASLLRARTPGTRWNLLHAAFTGICDSIRRPDTYADMTSDPDFADLLQKFPAGAARKGIRYVLPLKCMLAAHPKPAEWICEPDAEGVSAWHLAFYANCPPIVALFADTLREAGVTPPPWPADARVTAWGAYTNTPGHDVTIDMYPHLVDAYSAGGLGGEIRFFEHMTRHSRCRIVPNEDRRHLAVRPFGSAVEVVLYGRVLFWSTCGWTIEYTDEDERGVQALAAEAAECIRAIQRVVAEPVFGPPSRPFSEMCIALHVDACAAVEYARGSEPPSAAEEEKVHREIARECAPMHRYSTAFAGMLDGTGIADRDVPFIDVLMWFYDNALVPALLIAVVPPDIAALPEQALTTSARACRALLDLASVDMAAAELLPATWRPFATLPGGCMATTKHPDVLALPPRARTALELLVYLVHGVADHQFYATRYANKDPDAAEAVFTAARVLRVLTPAAARGYRTQTENVDAALRRNAGRMSAVGSGNGDVRSNGNNAGTAKTNLQAFAAAVNVFSGFAFVDSNPLAQPP* # ORIGINAL: g14366.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 2119 3608 . + . ID=g14366;Name=g14366.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 2119 3608 . + . ID=g14366.t1;Parent=g14366;Name=g14366.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 2119 2576 . + . ID=g14366.t1.exon1;Parent=g14366.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 2119 2576 . + 0 ID=cds.g14366.t1;Parent=g14366.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 2735 3608 . + . ID=g14366.t1.exon2;Parent=g14366.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 2735 3608 . + 1 ID=cds.g14366.t1;Parent=g14366.t1 #PROT g14366.t1 g14366 MMLKKDSIPATLATVLGCMLDTSALDWLGEVEVCIDRIRNGGGKCPFSLALDRSAIVFNGDKAAGADVVFPIRRIEDGAIGMFCIQSKATNAAVKLSKALAVHSGTQYLRTHNSLKAGEAIFVSPTLVKPASGGNRDAYVATLKEFAVTNRCGLCGDGRVANPDNQHDLRPNLRIAAGTDRRATTVTLTPNPRRPQRRPLRGSGTYALLVRVGGTLFPARTLRVADAQWMYASAEALAFVSDTYRTPAAEVTFSLVGLAGITVAMAAGFAAVVRTKGEVKIIKRASPPFLMAMLAGSVLSSLSVAIQMLGRSNNGACIATAWFRHLGFAVFFGALFAKNWRVSIIFNNKALKKLGSSLTDRRAVRADRRRARRVDRARRAVRRNPRRREHHAVVGRDRHVHVPHARRHVRLWRVGRRAIARRVRRDRRPAVAVRAALESRPRL* # ORIGINAL: g14372.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 17061 17558 . + . ID=g14372;Name=g14372.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 17061 17558 . + . ID=g14372.t1;Parent=g14372;Name=g14372.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 17061 17558 . + . ID=g14372.t1.exon1;Parent=g14372.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 17061 17558 . + 0 ID=cds.g14372.t1;Parent=g14372.t1 #PROT g14372.t1 g14372 MLNTIYDLLGNGHAISALLNWLKCSQPSKSHRAALLSGPCGVGKTASAHLACSHLNMRAIELNASDTTTPKALSNVFLTSSVGLDGKRHVLIIDDVDCMDRGGLAHLVKFIKQAHLPVICICSERFDPPLKTLATLCIDLRFDKLDTGTLRRIVVANFPKCPPPP* # ORIGINAL: g14371.t1 original gene structure, not modified by PASA NODE_786_length_17703_cov_26.3729 AUGUSTUS gene 14301 16538 . + . ID=g14371;Name=g14371.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS mRNA 14301 16538 . + . ID=g14371.t1;Parent=g14371;Name=g14371.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS exon 14301 16538 . + . ID=g14371.t1.exon1;Parent=g14371.t1 NODE_786_length_17703_cov_26.3729 AUGUSTUS CDS 14301 16538 . + 0 ID=cds.g14371.t1;Parent=g14371.t1 #PROT g14371.t1 g14371 MERSAQSRPFVEQFIADYEWDATRATLAIREAIAKAFEINNIPLDWNNQQVLDWLKRVAGMRNWRQVPKIVMDTGPSSSGATFRRAWAKFHDDEDAEATWNGFRSGSFVEELELRPPPSYLYPLLISHLKRHSPEPSLVTVSAQATAQAAQASSQASAPAESVSVTRSTADVGCGNSDDEADSELNSQTDAFASYGGGVNSAAPPDLQMAFQVTDNVRKKMRAKYDLRIAECETAGTFAPSSHNNVALGADSGPTFLGNGSFSVSVVVGKFPRRGRQGGYDYVAVKRIRDADQSVFSREAAALEVFRTDPHAYVIVPYDEWVDESAKFGYIATELCVMTLDERLSDEGLAEIGTMTAREINVVCRGICAGLRAIHMRGFCHRDLHPKNVMYKRDGEVCITDLGLARPTNDATKSMGDWFQPPEILRLRDGGQPVAGSVKADIFMLGMTLHKTVAGTTAYDTTNVAMYVEALKDNQIEISRRVWEHDPFLGYLLLWMLETTPGARPANMAVVMNHPWFWSLADRKMATLGLAQTESVNRFYPLMSATVPTEDFVSLAHSFAPLEGHPAAFAPLWNTLLYRAVDLQSAFATHPNQRDVFRKRRQDGALLFAKLYASLGPSAHADAGATPSESQPEALDFRSVQSPGRPRMRQDLFRLIARTLRNFVAHVNQEWQASPSVDLCEGFARPPTVELDGRGKPVTPAPNSRSSPFRNWEEYAYRHPKFAWILPYLYRLEQDAPEHISGRTS* # ORIGINAL: g13694.t1 original gene structure, not modified by PASA NODE_2789_length_5124_cov_35.1452 AUGUSTUS gene 166 5046 . + . ID=g13694;Name=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS mRNA 166 5046 . + . ID=g13694.t1;Parent=g13694;Name=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 166 357 . + . ID=g13694.t1.exon1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 166 357 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 530 697 . + . ID=g13694.t1.exon2;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 530 697 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 871 1011 . + . ID=g13694.t1.exon3;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 871 1011 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 1193 1432 . + . ID=g13694.t1.exon4;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 1193 1432 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 1642 1881 . + . ID=g13694.t1.exon5;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 1642 1881 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 1984 2048 . + . ID=g13694.t1.exon6;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 1984 2048 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 2272 2380 . + . ID=g13694.t1.exon7;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 2272 2380 . + 1 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 2487 2602 . + . ID=g13694.t1.exon8;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 2487 2602 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 2937 3119 . + . ID=g13694.t1.exon9;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 2937 3119 . + 1 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 3350 3554 . + . ID=g13694.t1.exon10;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 3350 3554 . + 1 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 3823 3969 . + . ID=g13694.t1.exon11;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 3823 3969 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 4163 4657 . + . ID=g13694.t1.exon12;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 4163 4657 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS exon 4903 5046 . + . ID=g13694.t1.exon13;Parent=g13694.t1 NODE_2789_length_5124_cov_35.1452 AUGUSTUS CDS 4903 5046 . + 0 ID=cds.g13694.t1;Parent=g13694.t1 #PROT g13694.t1 g13694 ELWALLHFLEPSVFATWEDFQARHNVEAGHDQLDRETLAALHTDLKPYLLRRTKKEVEKSLPAKVERILRVDMSGLQRQYYKWLLTRNFQMLQSAGGKAKSVMNLMIELKKCCNHPLLVKESEALEPNDNAGRLEQLVMNSGKMVLLDKLLCRLKETGHRVLIFSQMVRMLNILGEYLQRKGFQFQRLDGNTSREMRKQALDHFNADGSKDFCFLLSTKAGGLGINLATADTVIIFDSDWNPQNDLQAEARAHRIGQKKVVNIYRLVTKGSVDEEIISRAKKKMVLDHLVIQRMDTTGRTVVDTGLRHHKGEGAAPAAASTTAPFSKDELNAILKFGAEELFKEAENEGDRRLRELDIDDILERAETHVNTEQPVAGEELLSQFKVADFSVGKEWTEIIPQSDLQKIEEEEKQKQLLESYLPPRQRKAAMKMAASDVLDEPEEVKAPRGRPKKENGGRGTSQKGSGKKGGVDPISNGLSKVEVGRFIRSWRRFGAIDRRLTDIMDDANLTDHSHADIAELAAKVKKGCNEAIERHKALGGGAVEGEEGEEGGKASSKAPTFTLLGVAINATELLRRDEEMEILAKRIENCGAPEKFRVPANKGVKNVTWSCPWTPKDDASLLRGIHQHGLGKWDLIKVDPLLNLQKILPDNTSEAPQITHLQRRADVLLKAIASSKPPTASATGAALLLKIGPTKPMKGGKQQTLKTAFEKGREKNKGKEKEKEKEKERERDNKDKDKGKGKDKGKRAKDADKKSRKTESESDLDDKSDLSTDVESNCRALMKGVREDIRDFAELPDRADKEKWTNQEKVACIRQ # PASA_UPDATE: g4936.t1, single gene model update, valid-1, status:[pasa:asmbl_5487,status:12], valid-1 NODE_3053_length_4436_cov_83.5563 . gene 141 4412 . + . ID=g4936;Name=g4936.t1 NODE_3053_length_4436_cov_83.5563 . mRNA 141 4412 . + . ID=g4936.t1;Parent=g4936;Name=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 141 303 . + . ID=g4936.t1.exon1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 141 303 . + 0 ID=cds.g4936.t1;Parent=g4936.t1;5_prime_partial=true NODE_3053_length_4436_cov_83.5563 . exon 649 1007 . + . ID=g4936.t1.exon2;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 649 1007 . + 2 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 1229 1402 . + . ID=g4936.t1.exon3;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 1229 1402 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 1664 1813 . + . ID=g4936.t1.exon4;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 1664 1813 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 1969 2089 . + . ID=g4936.t1.exon5;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 1969 2089 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 2318 2469 . + . ID=g4936.t1.exon6;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 2318 2469 . + 2 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 2893 3013 . + . ID=g4936.t1.exon7;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 2893 3013 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 3252 3433 . + . ID=g4936.t1.exon8;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 3252 3433 . + 2 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 3735 3842 . + . ID=g4936.t1.exon9;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 3735 3842 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . exon 4116 4412 . + . ID=g4936.t1.exon10;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . CDS 4116 4301 . + 0 ID=cds.g4936.t1;Parent=g4936.t1 NODE_3053_length_4436_cov_83.5563 . three_prime_UTR 4302 4412 . + . ID=g4936.t1.utr3p1;Parent=g4936.t1 #PROT g4936.t1 g4936 GTAVRGTMPGTAMVPGTAMRRGVGGAGGALASQIQVGDRPLTQQGLTGLKTGSQGPQRMVQDKTFYLGQLRAKSNELLAEINRLNGEIESYNRDNSSYLTYEKRADGLARELKDLQGQLGDYNTLMDKINTEANMDDIVHDRVKLAQKNDREEKMIDDVFTERSEKEHQIKKIEDEIEAERRSAESLVNDLDPEKRRLFFRLREENDKLLNDLRVRQEELDKYTEKAKGFEEELRMDRYKQMAVNLHDKIRVLKEKRDEIKKEVDGTAVENVPEERERLLAQVKEDNNQIASMEKKISEMQDKIKNANDIISQLDIDLDEHKSEANAKYHELLKRDREMQSFLDTYDETRKGEAEKKSHLEQNIVALLEHISRNMSRSKQMPSVDGLRAMRDDLMTKEKEMNNSQNTVAALDSERERLQGDLDKVNQLETKIADELEHIKEKMVRMDKELEKYTDLDGLKREWEITRKQQLADKVRFASHRDTYKVVLEHMTRFYDSKKQQLAENETHIQLGNLEQKLRHHEQSNFTLKQYIQTKTREADYQPVLEDVNSMVGTYNQMLVEALKHSSSGAI* # ORIGINAL: g13287.t1 original gene structure, not modified by PASA NODE_1514_length_10792_cov_37.1606 AUGUSTUS gene 194 10792 . + . ID=g13287;Name=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS mRNA 194 10792 . + . ID=g13287.t1;Parent=g13287;Name=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 194 1514 . + . ID=g13287.t1.exon1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 194 1514 . + 2 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 1844 1952 . + . ID=g13287.t1.exon2;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 1844 1952 . + 1 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 2281 2883 . + . ID=g13287.t1.exon3;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 2281 2883 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 3056 3256 . + . ID=g13287.t1.exon4;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 3056 3256 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 3486 5525 . + . ID=g13287.t1.exon5;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 3486 5525 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 5769 6275 . + . ID=g13287.t1.exon6;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 5769 6275 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 6497 6870 . + . ID=g13287.t1.exon7;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 6497 6870 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 7041 7350 . + . ID=g13287.t1.exon8;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 7041 7350 . + 1 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 7640 7807 . + . ID=g13287.t1.exon9;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 7640 7807 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 7995 8078 . + . ID=g13287.t1.exon10;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 7995 8078 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 8269 8340 . + . ID=g13287.t1.exon11;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 8269 8340 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 8585 8915 . + . ID=g13287.t1.exon12;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 8585 8915 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 9163 9292 . + . ID=g13287.t1.exon13;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 9163 9292 . + 2 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 9596 9694 . + . ID=g13287.t1.exon14;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 9596 9694 . + 1 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 10077 10182 . + . ID=g13287.t1.exon15;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 10077 10182 . + 1 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 10311 10500 . + . ID=g13287.t1.exon16;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 10311 10500 . + 0 ID=cds.g13287.t1;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS exon 10671 10792 . + . ID=g13287.t1.exon17;Parent=g13287.t1 NODE_1514_length_10792_cov_37.1606 AUGUSTUS CDS 10671 10792 . + 2 ID=cds.g13287.t1;Parent=g13287.t1 #PROT g13287.t1 g13287 DRNNLPPLCPLSATHAMAPSNERGIAGDDRPQPGDFFACAMRDLAVTLAAIRPSPSPEKVQRFLDSIPAWLRKDAPQTAHFGSGRQLHRRDQEALLAACRFFVLSEGCMHELVLPILLRALPALQHVAWHGDWAETAPPQLFADRFVHLLLHCASSCASASDAITNAVVATFGELCAVLRASWVEVDGATADGASSRAPSDNSDRRVRICRVVLPLALGFMSAIGKGRILWHASQLDSICAALEGLTRRDVLNGIVAGVIDVRASEPALFSNTLGDALVHAVQEAPVRSLLAIVQRYSEGSAAVWTDQRRKAVFVAVHTMYGERKEALFGSGSNLDMTTNVATDNMGAAIEILSLTATDEADARDACALMVEHLRAEDQEVDWMYAPLYLASLRGLGALCTQHARLAKGALDVMGKFTALPSPILVKLEAIRFDNEPLDCICKVLKASAQLAPEVAEAFVGALSNRLFTLGGEKSTVADAIYRNIVKALGKAACTIASPRLVDMVVSIFSQRLGYPASAIDREIILQLAHVASLGKDPSYRAIVDLLVQTARDSGFLPRKGKEAEGTDAAAGAHGMILSASVPALASSSNSNNAALSKSLSSATVQNNAADVREKAVVEALLHLARTMEDMKKLEELLIRVAELFVQMGWAVQHLSRGDKIRLQASSLAGNLGFYLPVLAALVTRVKPAETATPRTIRLFRDVWFFFVMLGFVVQGMWLDEWFEAIQLMARDSPFLVSARKSDEFESELELDSAVRGGAISPEEHANLRAMLQERLSRPALAASINKMSPAQCTYLLAVYHLETLRIERSSFKNVFRYIDDKGIERADMSAAVKAMADEVFALHLKSFQAQKRGHELERDLEDHALFLLVHFNHRNRKTKRAADEYLTHLFNAFPHLVTGRRVCHCMLDLLELLVRTLDDESCQSQRITLPLTTYSIDVPGERDFREKMVSDYCGRVEEMLGYAVQFAPAATQTTLQEYLAQFDRLGMGLDGHAGISLAMQFAGVGNSPAAASLPAALAQKLPGCVRSTASRFVSGLELRNHYYGEVAGMRNLLHHADLDAMDDSLGLHGPHDPKHSVSGTAGAGGFAGPTDFRRASRKSSTATAGLGSVTHSTSIASVTVSFTGGPRPETRTQQVIRSLSSRIARQLAEFARLGRAGARMDLLAFNMTMYRVSALIVTEPRRAPDRELLHLLVRAPINIFTEGSLRTGIFCWEWVASARPELETAVLCELSAAWAWTMDRRIGMFSQTLIDVDPLYTSVLSGGSSTGAPAAEAAQGGHSASGASGSASSERQGSSAHLPGAPEGTRSAHTDDPAPHRLLVRFMLERFEAVRHRSETQTKLFAGIVQRSLAEPSRIATHVKVRGCRFMLLQLGLRLLQGDHVSTTMGRFLLRERVYTAALHYFSSQPGWSPGTTEELRADIRELINFRRALKADRRHYKSMYPLPWRSVDVDTGFPNGSVRSAPRVDAVSTAINFNGGYMNTIRLSSTISRRGKYATLAAASESYAANGVNGAQSAHSHDLLDGSMSAFRDLQKVRLLLLHLARYEIDRLTTWHNPCGVPELVIDGEADDASAAKTAGSDDDPPAAKAISERQWKDYVRLVWQRCPPAAVQMAIRLKMPGTEALRSEVARWVRLDPLAVAKQPEALLFLVTRQTMVLDIPELTHALCWAPVAPATALAVFSKLYIPHPIVAHYAVRVLRGFPPDAILFYIPQLVQALRYDRLGYVNEYIVGAARSSQLLAHQFIWNMDTNMYVDDEMEHPDVLAPTLKAIIARITGSLDGKSLEFYRREFDFFGRVTAISGTMKKRVPEFKTPEDKAMRKQVCLEELKQINVEAGVYLPSNPEATVVDIAYSSGTPMQSAAKAPFLATFKVKPCSIQKLEEYGTEGGSEDCKDDPDTTWQSCIFKVGDDVRQDMLALQVIALFKKIFAKVNLDLYLFPYRVVATSPGCGVIECVPNTKSRDQLGRQTESTLFDYFKSTYGDTDSLGYERAQDNFVRSMAAYSVIVFLLQIKDRHNGNLLVDRDGHIVHIDFGFMFESSPGGNIGFEPDIKLTHEMVTIMGGDMDSRPFKRFVELCTKAYIAARPYQESIVALVALMLDTGLPCFREFDLEVLKRLSPARVRGLETVELVDVCCGAWHTMALVRRRETEHSEFDPPSTMVLTWGRGDAGQLGHGDTLDCVLPRIVHALLNRGVVQIAAGVTHSLALTSFSDVLSWGTGLDGQLGLHDVLETADPRTIIGLKNRAVIAIAAGAHHTL # PASA_UPDATE: g5098.t1, single gene model update, valid-1, status:[pasa:asmbl_1290,status:3], valid-1 NODE_1350_length_11850_cov_36.4766 . gene 166 3605 . + . ID=g5098;Name=g5098.t1 NODE_1350_length_11850_cov_36.4766 . mRNA 166 3605 . + . ID=g5098.t1;Parent=g5098;Name=g5098.t1 NODE_1350_length_11850_cov_36.4766 . five_prime_UTR 166 392 . + . ID=g5098.t1.utr5p1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . five_prime_UTR 680 748 . + . ID=g5098.t1.utr5p2;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 166 392 . + . ID=g5098.t1.exon1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 680 853 . + . ID=g5098.t1.exon2;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 749 853 . + 0 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 1100 1334 . + . ID=g5098.t1.exon3;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 1100 1334 . + 0 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 1594 1710 . + . ID=g5098.t1.exon4;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 1594 1710 . + 2 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 2038 2160 . + . ID=g5098.t1.exon5;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 2038 2160 . + 2 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 2385 2751 . + . ID=g5098.t1.exon6;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 2385 2751 . + 2 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . exon 2914 3605 . + . ID=g5098.t1.exon7;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . CDS 2914 3076 . + 1 ID=cds.g5098.t1;Parent=g5098.t1 NODE_1350_length_11850_cov_36.4766 . three_prime_UTR 3077 3605 . + . ID=g5098.t1.utr3p1;Parent=g5098.t1 #PROT g5098.t1 g5098 MVITLTLDRQQFHRLLGPLEELKNKDYKDYERKGEAIAHDEESPRNSDLEKYRLLKLEDIEIITTLGCGGFGRVELVKNKLDGHTFALKCLKKAHIVATRQQEHVMAEKRVMFELDHPFITKLYNTYKDPKFLYMLMEVNLGGELWTILRDRGSFDEKTTRFYIACVIQAFEYLHGKGIIYRDLKPENLLLGIDGYARLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDFAADYWSMGVLIYELMTGRPPFMASDHMQTYNLIIQGIDKLPFPKKFSKNVISLIKKLCRESPNERLGNMKDGIKEIKMHKWFQGFDWDGIANMTMVPPIMPVVRSPTDASNFDQYPKDTKIPPDDISGWDADF* # ORIGINAL: g5099.t1 original gene structure, not modified by PASA NODE_1350_length_11850_cov_36.4766 AUGUSTUS gene 3912 8388 . - . ID=g5099;Name=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS mRNA 3912 8388 . - . ID=g5099.t1;Parent=g5099;Name=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 8318 8388 . - . ID=g5099.t1.exon1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 8318 8388 . - 0 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 7856 8018 . - . ID=g5099.t1.exon2;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 7856 8018 . - 1 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 6774 7497 . - . ID=g5099.t1.exon3;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 6774 7497 . - 0 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 6008 6601 . - . ID=g5099.t1.exon4;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 6008 6601 . - 2 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 5066 5884 . - . ID=g5099.t1.exon5;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 5066 5884 . - 2 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 4367 4776 . - . ID=g5099.t1.exon6;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 4367 4776 . - 2 ID=cds.g5099.t1;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS exon 3912 4253 . - . ID=g5099.t1.exon7;Parent=g5099.t1 NODE_1350_length_11850_cov_36.4766 AUGUSTUS CDS 3912 4253 . - 0 ID=cds.g5099.t1;Parent=g5099.t1 #PROT g5099.t1 g5099 MQLEGIYGDRVSFFLSPPLHSDERQFADAFSLNLTPACGILDTATQKRVIDLTGDGDIEEELNSALEIVAGPIPYVRESEWLSDAWMIPQNDAVVYTFVHPSLHSTRQSVRDLASAAWSAPLSHGDRQSVVPVAWRDSSESGQVHFRSVVLDLLHDGTEPMGSYRISGRREGAGLSILLRRRVADVDPSSNLDGTAADGLRRSLARQLLFGELSHIPTDFMRSSRAVRADSASGVAFALDGHVLAGERPTSWALMEGVARAGGAVDIQRSLRLIVGAANANLAHPATNAFNATATDDAVGSTGGHPQLKTTPGFVRNIEDITDVSIDIQSSRDCMPCATPFCLAGRSDGPVASQCKPIDVIVELMTALRTLAGLPVSMETYYGRTAAYGIALHSAHVNALVTTLTPAVPVPGSTSANETDAGPVEACSGGNTTGFGFDSQSLPDYFESGDAMLKLATDNTWDDIFRGIASFPSNVTDRKCNHRTVQVIAVVFVREGCAYCDAVIPMLARVAQNMSSEGIGTLLVVDCSSTGKRICETLVIPGYPSLSVYRSAVVTVPESCAPFVRHVRTHWTPLKESTDEVPAPTSSKRSDSKSAVLSRTDYLDHFEFDSVIAWVRSVAYAQSVVRLSPSRDRLADSTQARGAHDARTHAHSHSRTTATLTATVTWRREKHRRADGFGGAPYPYACFSALCESLFGSSVTCAAEGLPSPHESIPKDPLGERVAAADSVSRATERGTKSRVDAGTGDASEYVVESMVLSRADGASFELHTYGRTLLSTLTAARNEDLFADGDGILSSAADASAHIVSALSMFPGASTATPSVRNTHTQAHTSHNTHTHTLSIAAESFRCEDNHSACTAAIASVAVSHSRSPLRRVGYDSFHSSVLSMSPHSSGSDGCAFKSSVAERLPVVVAVVHPDNITRQEGAVYMALHSAALSLYSKAAFVTVDIEEYPQWASQFRPDSQSGSLKVTEGRGPFDHLPVLCLLRPDDHTRCAFAPWNFDVDSGASLVSPRIQAGDLVRFVSDVLDEGTNARFVSTAGKF* # ORIGINAL: g2837.t1 original gene structure, not modified by PASA NODE_6598_length_538_cov_23.5119_potentialcontaminant AUGUSTUS gene 90 282 . + . ID=g2837;Name=g2837.t1 NODE_6598_length_538_cov_23.5119_potentialcontaminant AUGUSTUS mRNA 90 282 . + . ID=g2837.t1;Parent=g2837;Name=g2837.t1 NODE_6598_length_538_cov_23.5119_potentialcontaminant AUGUSTUS exon 90 282 . + . ID=g2837.t1.exon1;Parent=g2837.t1 NODE_6598_length_538_cov_23.5119_potentialcontaminant AUGUSTUS CDS 90 282 . + 1 ID=cds.g2837.t1;Parent=g2837.t1 #PROT g2837.t1 g2837 DLAARNCMVVAGLRVSCTLESGWKLSPKAHVTVKVADMCLSRDTGASGDYYVSKTRRKLPVKW* # ORIGINAL: g2016.t1 original gene structure, not modified by PASA NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS gene 101 1113 . - . ID=g2016;Name=g2016.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS mRNA 101 1113 . - . ID=g2016.t1;Parent=g2016;Name=g2016.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS exon 799 1113 . - . ID=g2016.t1.exon1;Parent=g2016.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS CDS 799 1113 . - 0 ID=cds.g2016.t1;Parent=g2016.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS exon 101 613 . - . ID=g2016.t1.exon2;Parent=g2016.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant AUGUSTUS CDS 101 613 . - 0 ID=cds.g2016.t1;Parent=g2016.t1 #PROT g2016.t1 g2016 MMVQPTLFGWLKQEQKKRRAVDDHSDDDASAAVGTEPHGANEVAPLGIHSKQHNRGVIKSGVTFAAKSVDHRGQRGKKLDEADPPDSREDATQIRAGKRRRTVDKLPSTWSSSGTTLSPSDLSTNTVNDTTIAKCGAVSKRNDVPNSIQVDDTADAAKITSYVGLRVPSPQPSSPHPPRGAVDAHMHRDNASDGEDESVGEAAATATSDDERDKSINFTGKNRKVHRGNESDACFLDVADDDGPADAELRRQRNIEANNRLLAQLGLLGPTPRVAA # PASA_UPDATE: g2017.t1, single gene model update, valid-1, status:[pasa:asmbl_6677,status:12], valid-1 NODE_3881_length_2575_cov_38.346_potentialcontaminant . gene 1711 2313 . + . ID=g2017;Name=g2017.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant . mRNA 1711 2313 . + . ID=g2017.t1;Parent=g2017;Name=g2017.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant . exon 1711 2313 . + . ID=g2017.t1.exon1;Parent=g2017.t1 NODE_3881_length_2575_cov_38.346_potentialcontaminant . CDS 1711 2313 . + 0 ID=cds.g2017.t1;Parent=g2017.t1 #PROT g2017.t1 g2017 MSSETNALLFPVDVGTCLPAFTRLVAGGEGDLDSVDTLVELRAELDALRFVTNLRLTNLRSFRSKSTAVISAARLALGKKRKAVDSDVDIDGDAEDGAPGRKRARKEGKLGSSSSGLGGKGDGSGASTPAAKRAPGSKKKMKGAIGGDDDARVPSEDEETAKATASHPFWASVEAYVPAITPEDMESLIAPTRKVTGAVV* # ORIGINAL: g806.t1 original gene structure, not modified by PASA NODE_1872_length_8786_cov_39.2551 AUGUSTUS gene 6466 7899 . - . ID=g806;Name=g806.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS mRNA 6466 7899 . - . ID=g806.t1;Parent=g806;Name=g806.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 6466 7899 . - . ID=g806.t1.exon1;Parent=g806.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 6466 7899 . - 0 ID=cds.g806.t1;Parent=g806.t1 #PROT g806.t1 g806 MAREKRKRGTDAPPRGSLEGWRDGKAQLAASDCICFICFDLFVEPVLLPCRHVICRKCLLDAAAAGCDECGHCRMRWLTFLRLNKDVPIDTVLWNEMKRLFPELVEARLRDESVDLSLNLIGRPAVTTHDGEVRREFELELAAMRDARQREQEEEERESRIAIEAMLREEGGIAAPGVQVAGVTSPTRPASGDDDQIEKDAEFARRLAADVASDLPATDAVGGPLAKPTAIIATPTAISTTHAGMHAVSAKPPAKTPTSAGRSRGERRDRDASHAHAPPITNWLKPRTPRDNDASNAASRAADESADMRSPQGAPLHHTPLHVHSARRSPVRGQSQSPHILDFASECIDPWNDLPSHPRDQRHAQTDGGGRGGALAGGHATAVTMDRLAGRMHASGGSDTGSAQQGDADEDTRLAQRLQAEYDQEVERAAAARMSQLSEDERLARALQATESGADASDSRWSDDDGGLDASAVDLWL* # PASA_UPDATE: g804.t1, single gene model update, valid-1, status:[pasa:asmbl_2861,status:12], valid-1 NODE_1872_length_8786_cov_39.2551 . gene 26 2747 . + . ID=g804;Name=g804.t1 NODE_1872_length_8786_cov_39.2551 . mRNA 26 2747 . + . ID=g804.t1;Parent=g804;Name=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 26 569 . + . ID=g804.t1.exon1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 26 569 . + 0 ID=cds.g804.t1;Parent=g804.t1;5_prime_partial=true NODE_1872_length_8786_cov_39.2551 . exon 745 946 . + . ID=g804.t1.exon2;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 745 946 . + 2 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 1090 1360 . + . ID=g804.t1.exon3;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 1090 1360 . + 1 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 1474 1569 . + . ID=g804.t1.exon4;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 1474 1569 . + 0 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 1737 1910 . + . ID=g804.t1.exon5;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 1737 1910 . + 0 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 2112 2144 . + . ID=g804.t1.exon6;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 2112 2144 . + 0 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . exon 2336 2747 . + . ID=g804.t1.exon7;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . CDS 2336 2512 . + 0 ID=cds.g804.t1;Parent=g804.t1 NODE_1872_length_8786_cov_39.2551 . three_prime_UTR 2513 2747 . + . ID=g804.t1.utr3p1;Parent=g804.t1 #PROT g804.t1 g804 QFKFETESERNEWLAAFRGATEKLPIRRTVRRNNNGSGGGGGGSVTSAHAAESAVIKEGYLAKQGGLHRAWRRRWFVLTKTELAYYLTEDDADPLGTILMKECASMAVAESKVNVLHSFELGTPSRVYCMYADNQAEMRDWMTAIASLMPNNGQHADERDGLVNFNSDHPVTMQGWLRKQGGIHKTWQDRWFVLKGQYLYYFKSPDINGMQGAIRLENCSVAEVSQPDVGLCFAINTRRRVYFLGARNRYDMDSWITAVESQMVFNGDLPFADDLGASSGRFGNMMSALRRQPKVAAPDCVEGSAARGYLMKRSGSSQSWKCRWFVLKDTNLFYFKNSKDTTLLGQLAVDDAELESVEDTEYGNKEVYYDKVMYLMSSDKFYGSDFPPFEAFKSSILNNCGFAIHTRRKVYYLVAPTREMAENWMQAVNDAIENSQLAVKTHVRRASEHDEDESDGNSNSHLVIADLLDTYSTSGSSRPSSPRPVSPRPGSLAARAFL* # ORIGINAL: g805.t1 original gene structure, not modified by PASA NODE_1872_length_8786_cov_39.2551 AUGUSTUS gene 3276 5924 . + . ID=g805;Name=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS mRNA 3276 5924 . + . ID=g805.t1;Parent=g805;Name=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 3276 3362 . + . ID=g805.t1.exon1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 3276 3362 . + 0 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 3619 3732 . + . ID=g805.t1.exon2;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 3619 3732 . + 0 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 3920 4030 . + . ID=g805.t1.exon3;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 3920 4030 . + 0 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 4170 4306 . + . ID=g805.t1.exon4;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 4170 4306 . + 0 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 4457 4576 . + . ID=g805.t1.exon5;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 4457 4576 . + 1 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 4735 4884 . + . ID=g805.t1.exon6;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 4735 4884 . + 1 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 4996 5023 . + . ID=g805.t1.exon7;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 4996 5023 . + 1 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 5382 5424 . + . ID=g805.t1.exon8;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 5382 5424 . + 0 ID=cds.g805.t1;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS exon 5566 5924 . + . ID=g805.t1.exon9;Parent=g805.t1 NODE_1872_length_8786_cov_39.2551 AUGUSTUS CDS 5566 5924 . + 2 ID=cds.g805.t1;Parent=g805.t1 #PROT g805.t1 g805 MSTGRKLQRLGIDQATLRRLTSHKILTCKDFLSVPEFELFHSLELTRSEFDKLYRLVCSAVLPANVSASDLVVSSGPRPRFLATSLSQLDVCLHGGLPAGTITEIVGPSGCGKTQMSHLLAVRATLPALDGGLGAAVAFIDTESTFSPKRLTEIATTRYPSTFPDEASLVPLLNKIHVCSTSTCAELMARLQDLESLIISERIGLIIVDSVAALVRREFGASSAVAQRTEILSRQASIMKYLAESFLLPVVVTNQITTRFVEKGSSEEGDSVSTTRGGAQQQTESEATAALGNTWAHSVNTRLAVDYIDGTTRRLRVAKSPVARPAAFTYIIDATGPVLTGTADGLDRHGQPASACSMGVRSDVVHGRVPGRIARALSVVVL* # ORIGINAL: g2149.t1 original gene structure, not modified by PASA NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS gene 1106 5132 . + . ID=g2149;Name=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS mRNA 1106 5132 . + . ID=g2149.t1;Parent=g2149;Name=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS exon 1106 1999 . + . ID=g2149.t1.exon1;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS CDS 1106 1999 . + 0 ID=cds.g2149.t1;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS exon 2163 2388 . + . ID=g2149.t1.exon2;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS CDS 2163 2388 . + 0 ID=cds.g2149.t1;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS exon 2535 4418 . + . ID=g2149.t1.exon3;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS CDS 2535 4418 . + 2 ID=cds.g2149.t1;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS exon 4568 4725 . + . ID=g2149.t1.exon4;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS CDS 4568 4725 . + 2 ID=cds.g2149.t1;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS exon 4887 5132 . + . ID=g2149.t1.exon5;Parent=g2149.t1 NODE_2670_length_5494_cov_58.5713_potentialcontaminant AUGUSTUS CDS 4887 5132 . + 0 ID=cds.g2149.t1;Parent=g2149.t1 #PROT g2149.t1 g2149 MAPFLEFEVPFDVNTLGKREFTRHDLEVFNFLGVPIWINDVSQFKLVWGNVAAKRLWQVGDMRDVDVSDASPQTRAYARSQLESWLTGATTVFPTVPRTVYPKGKAVTGLISTAPISVRFPLDEWDGKSPKCEHGVRQCLFVTFYSPRGQAEQARGSECFRISYSRFWMYDMPDSLHTSDLIKSLACGEAESESARTGTPEAARADAMASIAQANMTQLMCNEMALRFMTSLGYGSSMPLWAHFPTFDADVVLRVVADSLTAEYGTTLITTQVCVDDTLSPAHLATVLATNTSIGSEFFPSPLFLALGLVVLNTQRRRYYRLRVIKMRDPASIKVCLVVYHEDITELKEAELKLENALMQSSSKSDFISKMSHEIRTPMNAVLGCLQYLDVSGHSLTPDQRECVLTALMSGRALLATLTDILDMRKLEAGTLTLKRVDVTARELIGMVQDVIRIFDATKVSASFVATDASFRAISALPYERSCDPQTPMADLSLDVNLKSFKLSRQNDGVVLHVDVNRLRQVIMNLVSNAVKYTPEGWVTVSLNLVADRLTISVRDTGVGIPSDLHGKIFEPLYRIERAQDTASSVSAGLGLAITRHLVELMSGTIHLESEVGRGSTFSVSLSCGEGTRESDSGFESEKIGRVRSRNLSWASGTRTPSGSFESGLAARRGSCERSPMPSSHATAGAAQTPTLEDRARVLDTRYGRRSALRVAVFAEKHVVGPRTLGFLRKNVSHLAVVSCCGSDGDVYADAARDPACTCVSSLVGRYDIVVVDEAWPCAQSKGDRRVEECSTRAHVAEDKSDVSDGLGGLEQFCLVISSAVRGEVVVLLSLPHMGWSQRMRMPGAAMRILRKPLMPLELPGLFEVVSVVDEMSAEMDAILDSDELTRHVSGVAGDCGASSSLRGRGGSGAEGKLHVRPGRRREEARSDSLLPFGNGVIAEHKSDEPAVCGSSSVECAADNGARASGVSGVASGVPASNPCAVPVASLPEGEDSHPRILLAEDNHVNQMIFTRIIAAIAPSAVVDVAADGIEAVDMFTAARKKGRHYVVIAVDVQMPRMDGLEAAVAIRAVERACEGPPRTPIYVISADDSAHIRERSDGVDVDGRLAKPVSIAEFRKVFGAFVPLRETILPSCHK* # PASA_UPDATE: g6394.t1, single gene model update, valid-1, status:[pasa:asmbl_2123,status:12], valid-1 NODE_1605_length_10221_cov_34.121 . gene 588 10221 . - . ID=g6394;Name=g6394.t1 NODE_1605_length_10221_cov_34.121 . mRNA 588 10221 . - . ID=g6394.t1;Parent=g6394;Name=g6394.t1 NODE_1605_length_10221_cov_34.121 . five_prime_UTR 10221 10221 . - . ID=g6394.t1.utr5p1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 9965 10221 . - . ID=g6394.t1.exon1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 9965 10220 . - 0 ID=cds.g6394.t1;Parent=g6394.t1;5_prime_partial=true NODE_1605_length_10221_cov_34.121 . exon 9620 9816 . - . ID=g6394.t1.exon2;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 9620 9816 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 9287 9439 . - . ID=g6394.t1.exon3;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 9287 9439 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 8915 9083 . - . ID=g6394.t1.exon4;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 8915 9083 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 8228 8463 . - . ID=g6394.t1.exon5;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 8228 8463 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 7870 8026 . - . ID=g6394.t1.exon6;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 7870 8026 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 7241 7686 . - . ID=g6394.t1.exon7;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 7241 7686 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 6980 7084 . - . ID=g6394.t1.exon8;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 6980 7084 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 6481 6758 . - . ID=g6394.t1.exon9;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 6481 6758 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 5794 5941 . - . ID=g6394.t1.exon10;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 5794 5941 . - 1 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 5406 5609 . - . ID=g6394.t1.exon11;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 5406 5609 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 4906 5122 . - . ID=g6394.t1.exon12;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 4906 5122 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 4406 4785 . - . ID=g6394.t1.exon13;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 4406 4785 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 3293 3400 . - . ID=g6394.t1.exon14;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 3293 3400 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 2758 2997 . - . ID=g6394.t1.exon15;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 2758 2997 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 2391 2559 . - . ID=g6394.t1.exon16;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 2391 2559 . - 0 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 1764 2180 . - . ID=g6394.t1.exon17;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 1764 2180 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . exon 588 1495 . - . ID=g6394.t1.exon18;Parent=g6394.t1 NODE_1605_length_10221_cov_34.121 . CDS 588 1495 . - 2 ID=cds.g6394.t1;Parent=g6394.t1 #PROT g6394.t1 g6394 PPPPPPPQRIRTHLAAAGTALTSALATVTVSLASKSATLESIETRATGTFAVPVLTANPDVSIGISAGVYRDANAATYSAGIIVKGIPLADILTFASQWFTKYTGIGAFDAKTFKLRQGTVTISLANNAMSIMGEPVGKGLGATWDGVLLKDALEGAFVDSMKQLASQVSVANLQVSAVFPWDGVTPWQVACRLPAASIGSSITMSNLYFRVEVRKTAFDLFFGGAATIVVAGGSPTFNVAGKFDSSQNLFSATGSLAAPWNVLGFDVLNVVSADATITSKAGMASATFTATMDATFVQTTPPPRFSLRSSISASGYYIRTIDPILIQNFVPSRVKTAIDFSGNAIVYVSSYTFFDDGGREILPGINIFASGIQIVTQPGNQQLVQMLQDYFGVAVPSTVSDLRINLPLPKLFGRRRAITTTHTGEQWGVTVTLPTITPFTGLSFTSNRFFINYSPSGISTTLTSTLLTDVLGSSFTTEMRGSFESNAASLMLTGEVSAWQKPFGLSWVDIGITKGTAEFGPGKRRLSLECSVSVAGSTVSFRGAITERGAYIGAYGINPTQLFTIVSTAFDKVTVTATSASLKAQLIEAVQDLEIGIAFSTIDGVIDVIGVDSYELSRGFNAFVKSQKKGRSCTTAAEKSSLQDCEADYLTNAKQIVSLQPLKWGYGFILPIFPGMSGDVEVFVGSRDTPYQLERRLTLAYVKLSAILSLSVVRRDAETSTAVALFDDMVSSASNGALSVNDARALSRHGRALSASLQIASRLTLTLDNSGPIDIDVVGSIRVAPPVTEARVVGTMYSPMWTNAFGIQGLNILGAFVGIGFGSPTVLTYFGLGGAVMFGRTRFEIQGAYDFSALGGYIKLKLGGAKPLTILDLLDYVNVVKPNAIDTTKIPAWIRDNAASILSLQSVSLQAATKSMRIPNFSVLAAKQPSDLKGIDLSTKFDISSISQQEYIERGFKLTSKLNVLFLSIDANVTMTFNDKLGADALVRDAEGRTPLHWATLVDSTKGLKVLLKHLKKSALGSLDTGDLIGMTALMFCAYHCRAEHGALLLKAGADPTIRDADGRAAIHHAVAHKFDLGCLPLLLNLESSKWRDAKGKAVIHYAAEQGAGRACRLIASLRADSVHDTDLKLRTPLQWAAACGQAETVRILLEANANANHVDADGYRALDYASAKKYHYCYLLLSAYGQTKLAETVQAAQLSRGDRRRESSPDIADDSISIATEGSRVSSVAPQLTSSEYDELFRALMHGCYLLKFPEDGKGQPHRRYFAVDVYSGRIMWGKAPEDVDGKAETGDAIVDISPHPSKVIRDRKDYDPQGRHKLCFSIQTTTRHLDLIAASQAECDAWLYGVRGMLSFGARVIGGNSNKVGGVLAARRASKDNGRPAVPQAKPAGLTQFFESVERAERERALSAINDERKRRGLPPIRDEAWNSAHPPSAATVPDESHASSVASSTVSVSVGAGGSSAPAHAHSLGVATETDPVHTSGVRATSSASFLGTSAQLKAMVDSTAMNRIDETMENVPARRTIEPLVAFPKPSSVVLPADVKHTAGAGVDGGAGIGMGVDPAGPQRSPLKSPRVSAEAELNASQVTVPGSLE* # ORIGINAL: g4399.t1 original gene structure, not modified by PASA NODE_3566_length_3192_cov_97.5415 AUGUSTUS gene 177 2986 . + . ID=g4399;Name=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS mRNA 177 2986 . + . ID=g4399.t1;Parent=g4399;Name=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 177 316 . + . ID=g4399.t1.exon1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 177 316 . + 2 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 438 584 . + . ID=g4399.t1.exon2;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 438 584 . + 0 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 767 845 . + . ID=g4399.t1.exon3;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 767 845 . + 0 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 1106 1220 . + . ID=g4399.t1.exon4;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 1106 1220 . + 2 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 1386 1471 . + . ID=g4399.t1.exon5;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 1386 1471 . + 1 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 1652 1784 . + . ID=g4399.t1.exon6;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 1652 1784 . + 2 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 1998 2138 . + . ID=g4399.t1.exon7;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 1998 2138 . + 1 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 2404 2515 . + . ID=g4399.t1.exon8;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 2404 2515 . + 1 ID=cds.g4399.t1;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS exon 2807 2986 . + . ID=g4399.t1.exon9;Parent=g4399.t1 NODE_3566_length_3192_cov_97.5415 AUGUSTUS CDS 2807 2986 . + 0 ID=cds.g4399.t1;Parent=g4399.t1 #PROT g4399.t1 g4399 CTSMHAAAAGGVPECIEVLLSNGVQADVQDKQGLTPLMAASRKGFTEAADVLLGAGARLNATDIKGRTAMYKAAAYGHDSVVELLITKGASISTKAKNKRTPLHAAASRGHVNCVRILLERGAEITCVDGQGNTPLHCAALCGREDVIAALLEAGASPKTRDSNGMLPLHMAALKGHLRACQRLLEVAGDDANTVDGMGRTCLHAAAFKGNLECAQLFLSRGAEVNAKDSKGRSAMHYSAICAMLAVARKLVASGAIADSTDSWKRTPLHYASAFDQESSTVDFFLSQGCKADQHDTFGYTPVHLAARYGHAESIELLLRSCSDEGEGVCNAPDAEQRTPLHFAAFGGHRTAVQNLLEGGAEANPRDSKGGLGCAL* # ORIGINAL: g5314.t1 original gene structure, not modified by PASA NODE_1981_length_8203_cov_40.2178 AUGUSTUS gene 4941 6484 . + . ID=g5314;Name=g5314.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS mRNA 4941 6484 . + . ID=g5314.t1;Parent=g5314;Name=g5314.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 4941 4947 . + . ID=g5314.t1.exon1;Parent=g5314.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 4941 4947 . + 0 ID=cds.g5314.t1;Parent=g5314.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 5073 6484 . + . ID=g5314.t1.exon2;Parent=g5314.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 5073 6484 . + 2 ID=cds.g5314.t1;Parent=g5314.t1 #PROT g5314.t1 g5314 MNVPAKVPKSTGDSLGSGWGAVELSSGIPGFVDEDLLIDADMSSEDFLASFEARASESPFPEESQLRKRTVHTTGGALSGSVGDVGASASASASASAPSAAASAGNARGVRVDDLVRDVAHHTALASAAMEESRTSFNAPLSFLSTMPRNFSLFIRRIGPALDLVEALIAILQWKDSAQTAVAILCFIATCLYPSLALAAIPCIALVYFLRVLIRHAKSRMPGAGGVDKHLRLVDPAQVSSAELKFNMQRIQNMMGMYTTSYDSLVEALNAVEKSDDIAMKGARYSAAAILVALGVGYFVPLHVLVMLGGLTVFFINTPAFRGASTILFAHVVARFSHRLYTLSSLGSVAAASGNNVDVQSVRCYENQRWWLGRGWIDTMLPGERSQFSNADGTLVRTRDDSLLPPGCHWVTDWCVDKTASDSDGWQYASNAWTGFTAKPTSSSFTRRRCWFRDYAPEGKARVKQTVPGSPS* # PASA_UPDATE: g5313.t1, single gene model update, valid-1, status:[pasa:asmbl_3159,status:12], valid-1 NODE_1981_length_8203_cov_40.2178 . gene 2702 4181 . + . ID=g5313;Name=g5313.t1 NODE_1981_length_8203_cov_40.2178 . mRNA 2702 4181 . + . ID=g5313.t1;Parent=g5313;Name=g5313.t1 NODE_1981_length_8203_cov_40.2178 . five_prime_UTR 2702 2761 . + . ID=g5313.t1.utr5p1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . exon 2702 3026 . + . ID=g5313.t1.exon1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . CDS 2762 3026 . + 0 ID=cds.g5313.t1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . exon 3263 3337 . + . ID=g5313.t1.exon2;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . CDS 3263 3337 . + 2 ID=cds.g5313.t1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . exon 3439 3551 . + . ID=g5313.t1.exon3;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . CDS 3439 3551 . + 2 ID=cds.g5313.t1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . exon 3719 3841 . + . ID=g5313.t1.exon4;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . CDS 3719 3841 . + 0 ID=cds.g5313.t1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . exon 3988 4181 . + . ID=g5313.t1.exon5;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . CDS 3988 4089 . + 0 ID=cds.g5313.t1;Parent=g5313.t1 NODE_1981_length_8203_cov_40.2178 . three_prime_UTR 4090 4181 . + . ID=g5313.t1.utr3p1;Parent=g5313.t1 #PROT g5313.t1 g5313 MRFLLIAAVVAALCASCARADYFEVWSVDPVTAKNSEFIVSDTKPLPAGGLGIVTKMGAFNVTQFQAGGTGAKCDGDQLDLSILVQTLAGISPIKPRIRMQSRDATGFHTIKMGVAGVSMDLDFDLQQIAGPSAPAEFDAGQTYKFDMQFKDAIVNAPIVGNTKICVNLNTREIVAKVSIIKWLYFNIPKDLGGVFYMNVAPATGDVIASIKVCTDQTLCAAAPA* # ORIGINAL: g5315.t1 original gene structure, not modified by PASA NODE_1981_length_8203_cov_40.2178 AUGUSTUS gene 6696 8203 . - . ID=g5315;Name=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS mRNA 6696 8203 . - . ID=g5315.t1;Parent=g5315;Name=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 8042 8203 . - . ID=g5315.t1.exon1;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 8042 8203 . - 0 ID=cds.g5315.t1;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 7741 7830 . - . ID=g5315.t1.exon2;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 7741 7830 . - 0 ID=cds.g5315.t1;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 7431 7613 . - . ID=g5315.t1.exon3;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 7431 7613 . - 0 ID=cds.g5315.t1;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 6991 7087 . - . ID=g5315.t1.exon4;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 6991 7087 . - 0 ID=cds.g5315.t1;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 6696 6847 . - . ID=g5315.t1.exon5;Parent=g5315.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 6696 6847 . - 2 ID=cds.g5315.t1;Parent=g5315.t1 #PROT g5315.t1 g5315 PPPPTCYYRSYNNIVRTIPGTNTVGHQLPINKLSDLLRVQIAMAGFTEALTLSLCSLDENFSSLNKADDGSAVKIANPKTAEFQVVRTSLLPGLLKTIACNKKMPLPIKVFEISDIVRKDATKDVGSRNIRHMAALYYNKTPGFEIIHGLLDRVMQLIEVPFAAEGAQKGYYLKQSNDTTFFPGRCADIFANGKKIGVIGVLHPEVLTKYDLNMPVAAVEIDIEPFL* # ORIGINAL: g5312.t1 original gene structure, not modified by PASA NODE_1981_length_8203_cov_40.2178 AUGUSTUS gene 390 2106 . - . ID=g5312;Name=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS mRNA 390 2106 . - . ID=g5312.t1;Parent=g5312;Name=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 1416 2106 . - . ID=g5312.t1.exon1;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 1416 2106 . - 0 ID=cds.g5312.t1;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 1231 1273 . - . ID=g5312.t1.exon2;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 1231 1273 . - 2 ID=cds.g5312.t1;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 926 1046 . - . ID=g5312.t1.exon3;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 926 1046 . - 1 ID=cds.g5312.t1;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS exon 390 731 . - . ID=g5312.t1.exon4;Parent=g5312.t1 NODE_1981_length_8203_cov_40.2178 AUGUSTUS CDS 390 731 . - 0 ID=cds.g5312.t1;Parent=g5312.t1 #PROT g5312.t1 g5312 MVKQVQISVPPPIAGEVVAALSAHSHCLCLNVFPGDRHTLLIIKCADKKLGGIMHVLEDLGVGTTTGHIDVLEIQSCMPPISAYKPPGKAKRRYKVSDRMSIEEIYQAIDKKVNLPSMVTVSPCTYINSRVHRLLPSDGIKYSLLSVSSTSTLRQIHLTFDYLTFVVIAGIVAAVGLIQDDATIITAATIVSPLMGPIMGFTCGVSLRDKTMAIKSLRTEFLGVIVCFCLGFGLGLIAAPFNPDWPTKAMANRGRAWGLVAGAGIAIPAGAGLALSITSGISSTLVGVAISASLLPPVVNSGIFAGIALYKRAKKDVNDYERYGLIAGYSISLFAINFIMIFVVGLLFFKLKAVSPLKLNTHKSMPLGSENSSSTLLLLSADDLPSRAQNPTNDGLAQ* # ORIGINAL: g4482.t1 original gene structure, not modified by PASA NODE_757_length_18056_cov_39.5699 AUGUSTUS gene 14379 14978 . - . ID=g4482;Name=g4482.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS mRNA 14379 14978 . - . ID=g4482.t1;Parent=g4482;Name=g4482.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 14379 14978 . - . ID=g4482.t1.exon1;Parent=g4482.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 14379 14978 . - 0 ID=cds.g4482.t1;Parent=g4482.t1 #PROT g4482.t1 g4482 MSIGRRSAGLRKRTAVEEETRATHSSDLSASLLRVNPTAVAYVATRGKSSRIRARISEAPTAGPSVVSVDGAIINSAAPSSVGGHVKTPTKGMEFADRDAAFAHIRAYVAQTGYGCIARTNRSAVNPAGLPFLATFNCRSNYKGRKMCPFTVTVKPADKANFCGKWRVDPGKCMLVLDHDLAAHDTAEARRSAKRGALP* # ORIGINAL: g4480.t1 original gene structure, not modified by PASA NODE_757_length_18056_cov_39.5699 AUGUSTUS gene 11376 13133 . - . ID=g4480;Name=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS mRNA 11376 13133 . - . ID=g4480.t1;Parent=g4480;Name=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 12647 13133 . - . ID=g4480.t1.exon1;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 12647 13133 . - 0 ID=cds.g4480.t1;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 12336 12539 . - . ID=g4480.t1.exon2;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 12336 12539 . - 2 ID=cds.g4480.t1;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 12049 12157 . - . ID=g4480.t1.exon3;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 12049 12157 . - 2 ID=cds.g4480.t1;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 11784 11842 . - . ID=g4480.t1.exon4;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 11784 11842 . - 1 ID=cds.g4480.t1;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 11376 11644 . - . ID=g4480.t1.exon5;Parent=g4480.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 11376 11644 . - 2 ID=cds.g4480.t1;Parent=g4480.t1 #PROT g4480.t1 g4480 MACLSGVNLPVVIGCLATAMALISCLTLVGVHVFPATLNRALGLESDENRPLHHSGTHKQAGHVAADGVMSIPPEHYSNRLFHPPASKDGGRSHNHRINTVVSTPSTDEIHAKAVMGLVGRLTQEAKASDFLIALAVPSPPDATDSREILREAWINDAPFEQGKGVAVRFVVFLSHDAGPTMRAIVARESQFKNDLIVVDEPHLTPAFNSSIAALVAIGRVARAFPNATYIGKCGHSAFVNVGFLMDALVGKAKEGLVYGRGWWASRGVAKSKAPPGIRQPDGCCANALYLMTRDVAEAVTHAVHDPHKMQEWRHFSDGSIVGAIGRKIGAKTLNEARINIDQRCLAVATDGLDRSEMMDLKRNCGLSTTTKTRR* # ORIGINAL: g4479.t1 original gene structure, not modified by PASA NODE_757_length_18056_cov_39.5699 AUGUSTUS gene 8200 10071 . - . ID=g4479;Name=g4479.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS mRNA 8200 10071 . - . ID=g4479.t1;Parent=g4479;Name=g4479.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 8200 10071 . - . ID=g4479.t1.exon1;Parent=g4479.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 8200 10071 . - 0 ID=cds.g4479.t1;Parent=g4479.t1 #PROT g4479.t1 g4479 MPTMQRSDTRAVTPCIYFFGSGCRYGSECRFSHHALDCEPDDPTVLPDDSQYQGECEDTNTEDDDYSYDYEYTSDDYEYTYHYNYTYTYSYRNPFDEPVRIPSRSDNPGDLLPNVRFLPSASPYANNDYYGRGGFSEDQPPTTAASVSLMDRASPNGHTRAGISDIWSRDNEPNAVEDPSVAEMHFRCAASLRTLQAVSSAQTSLNQGPITALTPICQCGTGALEGALRCVCDRVEDNNNHNNSSSSNNHNNIVSSGTDSNIPNNIDGSAHHASSPSFAGIQSSSLDLESARATLDGPVLDSLFASISGNLARAESEQSAQQLSTLHPYATTAADSATRASGEGLATTNTLRGEVSGVTANQSVNIATVGDVSSADELLNVDRNDAAGVERTGHVAGDGLQGRGGRLLVNGQWIERPFVFRMRYVDGELHSVSLGDYQIFSETAVCTDETAAPTVEGEAGEDANSDDAESSDDSESSDDTESSNDSDDSDSSNGEDADNSVREGLGAFARRTSPPPALSSALPFVRSSISRENESDVPLSNVWDSDEDYGFVHVRRRNSDAQDRDAMAAMAEYSSARCVADKTWLCRDYGTECGICLEEIPSTGRKFALLCGFSIYANIVLRF* # PASA_UPDATE: g4477.t1, single gene model update, valid-1, status:[pasa:asmbl_9224,status:3], valid-1 NODE_757_length_18056_cov_39.5699 . gene 162 2733 . + . ID=g4477;Name=g4477.t1 NODE_757_length_18056_cov_39.5699 . mRNA 162 2733 . + . ID=g4477.t1;Parent=g4477;Name=g4477.t1 NODE_757_length_18056_cov_39.5699 . five_prime_UTR 162 235 . + . ID=g4477.t1.utr5p1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 162 315 . + . ID=g4477.t1.exon1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 236 315 . + 0 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 528 750 . + . ID=g4477.t1.exon2;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 528 750 . + 1 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 1003 1452 . + . ID=g4477.t1.exon3;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 1003 1452 . + 0 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 1800 1880 . + . ID=g4477.t1.exon4;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 1800 1880 . + 0 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 2198 2249 . + . ID=g4477.t1.exon5;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 2198 2249 . + 0 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . exon 2478 2733 . + . ID=g4477.t1.exon6;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . CDS 2478 2650 . + 2 ID=cds.g4477.t1;Parent=g4477.t1 NODE_757_length_18056_cov_39.5699 . three_prime_UTR 2651 2733 . + . ID=g4477.t1.utr3p1;Parent=g4477.t1 #PROT g4477.t1 g4477 MAKWGEGDPRWIVEERADATNVNNWHWTEKNATNWSKDRLKAILGAVTDSDDSYGSIKVSEVSKIEGEASANNRKAKLIFFYEWDIKLKWVGESTNKEEGKVAGEIEIPNLSEENDISEIEFNITSKKDSALADRFKQVLRKRFVPKLREALTLYLRQLREEFSQGLILPTKEKSDVTIGVDATEAKPANGAAGGVKISNGDAVPAKTAPVKAPAAPKETKTITMTEEFKASADDLYQTLVNPQRVQAFTQASVVLDASVNGNFMLFGGNVTGKFTELVPGKKICQTWRFSDWPKDHHSQVTIEFVQGEADTKLTLTQTGVPASDYERTERGWHSHYWNKIKGVFGYGAGFY* # PASA_UPDATE: g4478.t1, single gene model update, valid-1, status:[pasa:asmbl_9222,status:12],[pasa:asmbl_9223,status:12], valid-1 NODE_757_length_18056_cov_39.5699 . gene 3227 5200 . + . ID=g4478;Name=g4478.t1 NODE_757_length_18056_cov_39.5699 . mRNA 3227 5200 . + . ID=g4478.t1;Parent=g4478;Name=g4478.t1 NODE_757_length_18056_cov_39.5699 . exon 3227 5200 . + . ID=g4478.t1.exon1;Parent=g4478.t1 NODE_757_length_18056_cov_39.5699 . CDS 3227 5200 . + 0 ID=cds.g4478.t1;Parent=g4478.t1 #PROT g4478.t1 g4478 MDDEDLRTTVFDCIVDGTGLAESILAAALSRAGKKVLHIDANDYYGAQWSSFTLTGLEEWLQSPSDYAVSKSFERFEWSLSATEAPADATPITHAAPAVDEAKKSDDTKKEDVVEVATDAAVPSSESPTVEQAPQPPHPAVTKAPIAVEVTFATALLRARQFQIDLFPRVLFSRGPLVELLIFSGVGKYLEFKSVDRTFMAVADTTNSNNNSGIGLAHVPCSRADVFASTAIGVVEKRVLMKLLTTCADYVAHRDEWVAAKDKPFLRYLCEDRKLSPKMAAFVAYAIALDGGEKGVLSTEMALAETQRFLGSLGRYGPTPFIWPMYGTSEVAQGFCRTCAVNGGIYVLRRGAMSVEKGDDGTVTVRCTEGHVYKSKWAVLGSSSTASIGFDGESASFSTPSSADVSSSTCAEYILRAVYVLAGELLCPSGEKKDAVQVITIPPGVARDGEAAGAIPGSIYAVSVGYSAAATPSGVSLLHVTARASTPHAGALLGPVARHFVRFPENSGSLQEEGMQDAAERRPRVLCAAHFALPHSSRSLSATTAIDGVLAVDAPLFSLDCDFAVEQALRLFRRMCPDDEFLPPAIDPDEVKASSSSTAPEGEGAVTETALPGLTASVDTGVDSTTEHTDGDVANTLDACVDSNSGEEVHAAGASST* # ORIGINAL: g4481.t1 original gene structure, not modified by PASA NODE_757_length_18056_cov_39.5699 AUGUSTUS gene 13600 14223 . - . ID=g4481;Name=g4481.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS mRNA 13600 14223 . - . ID=g4481.t1;Parent=g4481;Name=g4481.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS exon 13600 14223 . - . ID=g4481.t1.exon1;Parent=g4481.t1 NODE_757_length_18056_cov_39.5699 AUGUSTUS CDS 13600 14223 . - 0 ID=cds.g4481.t1;Parent=g4481.t1 #PROT g4481.t1 g4481 MTNPAPRQVTSPAPRQATTPAPRQVTAPAPRKATYPASRQVTAPAPRQVTTPAPRHVTAPTRQVTAEMTSQKVTTTQQFMAASTPAAPLTTTVGQHFTRASLRARRDDATPAPLVMSAHSSAEPLHPSFETRESSGMCVGGSGCVVECQRRALEAECAELRKQLASAVSDLNVAREERDLARRHLCLVHDVAVTGYDAVMGGLRNCP* # ORIGINAL: g4265.t1 original gene structure, not modified by PASA NODE_2641_length_5566_cov_38.367 AUGUSTUS gene 84 302 . + . ID=g4265;Name=g4265.t1 NODE_2641_length_5566_cov_38.367 AUGUSTUS mRNA 84 302 . + . ID=g4265.t1;Parent=g4265;Name=g4265.t1 NODE_2641_length_5566_cov_38.367 AUGUSTUS exon 84 302 . + . ID=g4265.t1.exon1;Parent=g4265.t1 NODE_2641_length_5566_cov_38.367 AUGUSTUS CDS 84 302 . + 0 ID=cds.g4265.t1;Parent=g4265.t1 #PROT g4265.t1 g4265 TCIDRALERGKTSGRTDDNIESLRKRFHTYESETKPIITHYEKLGLVRAVSSVPAPEAVFEEVKRLFNSLKN* # PASA_UPDATE: g4266.t1, single gene model update, valid-1, status:[pasa:asmbl_4705,status:12], valid-1 NODE_2641_length_5566_cov_38.367 . gene 608 4944 . - . ID=g4266;Name=g4266.t1 NODE_2641_length_5566_cov_38.367 . mRNA 608 4944 . - . ID=g4266.t1;Parent=g4266;Name=g4266.t1 NODE_2641_length_5566_cov_38.367 . five_prime_UTR 4920 4944 . - . ID=g4266.t1.utr5p1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 4052 4944 . - . ID=g4266.t1.exon1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 4052 4919 . - 0 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 3623 3714 . - . ID=g4266.t1.exon2;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 3623 3714 . - 2 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 3143 3304 . - . ID=g4266.t1.exon3;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 3143 3304 . - 0 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 2630 2791 . - . ID=g4266.t1.exon4;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 2630 2791 . - 0 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 2327 2457 . - . ID=g4266.t1.exon5;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 2327 2457 . - 0 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 1986 2081 . - . ID=g4266.t1.exon6;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 1986 2081 . - 1 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 1461 1524 . - . ID=g4266.t1.exon7;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 1461 1524 . - 1 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 1132 1250 . - . ID=g4266.t1.exon8;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 1132 1250 . - 0 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . exon 608 875 . - . ID=g4266.t1.exon9;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . CDS 800 875 . - 1 ID=cds.g4266.t1;Parent=g4266.t1 NODE_2641_length_5566_cov_38.367 . three_prime_UTR 608 799 . - . ID=g4266.t1.utr3p1;Parent=g4266.t1 #PROT g4266.t1 g4266 MTKKKAKQSRIRAAKSQPAEDEALSSVSLHANDQGETNSHIHINRERECTVETVDEQSHAEYGVHLDDASTDRSHVPHTNGFSHSHDERSDSKDVVDNVRHSITTRGKPDATLNVSGLVDEIPVNGNVNSLSCCERNASDVAKQSERYYQHHGANPLHPVGEHPLEPPSITNTRSTDTLLASEVSTVQLDSASSSAVAQSWVHDFEAQHPTHSETPLEVVVVGEMRDAKTAGDVLCGDNGIVIPNGNSAHYCCANGRAQATAAASGREVATRMPRGVATYMGARWAWVRALVSWAVCVWGVGAVLGGLILSRLWRTLAGQKRVMEYTRRYSTASDALIHGRVTVVVTCASGDSVDSLGACVRALKERAVTPDIEIVIVTRWMTDDVSAVALSVGARVVVDGRGRAWQFNSGAEAASGAGIAFLPSDITPPHAWDQSIIAALSDEGVAGGAFVLSSDSADVTCAPLCSAANFRARFFGLVSFDHVIFVRANVFRSVGGIPEQPFMCDYDFVRLVSQKGRFRHLPSHVTKRAAVSETSGGVKDVILGELSLVVYAYFGSKAVDRLDGLLFRNPIYLWLRRRASRRAEHSLR* # ORIGINAL: g1323.t1 original gene structure, not modified by PASA NODE_2359_length_6586_cov_42.5595 AUGUSTUS gene 6038 6562 . - . ID=g1323;Name=g1323.t1 NODE_2359_length_6586_cov_42.5595 AUGUSTUS mRNA 6038 6562 . - . ID=g1323.t1;Parent=g1323;Name=g1323.t1 NODE_2359_length_6586_cov_42.5595 AUGUSTUS exon 6038 6562 . - . ID=g1323.t1.exon1;Parent=g1323.t1 NODE_2359_length_6586_cov_42.5595 AUGUSTUS CDS 6038 6562 . - 0 ID=cds.g1323.t1;Parent=g1323.t1 #PROT g1323.t1 g1323 MVVVVPTDPGAAVVGGAVRYGLAPERILSHIMRYTYGVAVSVPFVEGKHPPSKKIWLADKHTWHCDGVFDRFVHNGQSVDVDSVVTNTYQVIRANQSSVHVSVHVTKAVDPLLTDEEGVERLYTVTVPIAGRGMDRGVFIHMCFGDTEIKVRVVDKNDRNAEMQFRLSYLGEAS* # PASA_UPDATE: g1321.t1, single gene model update, valid-1, status:[pasa:asmbl_4128,status:12],[pasa:asmbl_4129,status:12], valid-1 NODE_2359_length_6586_cov_42.5595 . gene 144 3124 . - . ID=g1321;Name=g1321.t1 NODE_2359_length_6586_cov_42.5595 . mRNA 144 3124 . - . ID=g1321.t1;Parent=g1321;Name=g1321.t1 NODE_2359_length_6586_cov_42.5595 . five_prime_UTR 2943 3124 . - . ID=g1321.t1.utr5p1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . exon 2836 3124 . - . ID=g1321.t1.exon1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . CDS 2836 2942 . - 0 ID=cds.g1321.t1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . exon 1082 2643 . - . ID=g1321.t1.exon2;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . CDS 1082 2643 . - 1 ID=cds.g1321.t1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . exon 840 900 . - . ID=g1321.t1.exon3;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . CDS 840 900 . - 2 ID=cds.g1321.t1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . exon 497 632 . - . ID=g1321.t1.exon4;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . CDS 497 632 . - 1 ID=cds.g1321.t1;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . exon 144 260 . - . ID=g1321.t1.exon5;Parent=g1321.t1 NODE_2359_length_6586_cov_42.5595 . CDS 144 260 . - 0 ID=cds.g1321.t1;Parent=g1321.t1;3_prime_partial=true #PROT g1321.t1 g1321 MSSKFDKPWRGGAGGGGAHTGGGAPRGSRRGAFSRGRGRHTEGGAGGKADADGDVQMEGARFADNIPRVRIANPKNIPTAGSTAFRRGGAAAAGRGGRGARGSTLSVRAMAAVRGRGGRGGANAGAGSRRPVAGSRVIVSNAQGLTAEDVGAFVVQQVPAAVTIVEVKKTRDDTSVIITVDSAESAQFLAQLGIVNFNGQSLEVKLMQDGQARAGGLTIQQRIGGEANMGGIDEDKLRTLLASKYESTTNSLNLSRVFREIPGAKVDLNDETTVHLIVKIIGREIPTIGVIDLSDNRIRTLAPFAGLGTAAPSLFALSLKKNDLRDIKELKNLSSLRQLQELIFLENPAQERFRDATAYRTQAREPFPSLKKLDGVELPPVITFAVQADGQSADVQLPPSLESYFTDQGSKGMVLTFLRQYFTAYDADRSQLDLAYSESCVFSLSVFGGGGSAADAGATQQQHRGRGGFGGRGGHQASQRGKAPSTIGAYFPTSRNLAQLKDTNKRVDRLHVGKDDVGGTLVNLSGTMHNVDSFIVDAYICGENLMAISIHGQFLEGSLGNQATRSFDRTFIVRPAQPNPAGWTLTIVNDQLTISEYVPGRTGPSPLPAPPAQSAGLSAEQQAVVLRMSSVTGMTVQYSQQCLETAGWDFDRAGQLFLEKK # PASA_UPDATE: g1322.t1, single gene model update, valid-1, status:[pasa:asmbl_4127,status:12],[pasa:asmbl_4130,status:12], valid-1 NODE_2359_length_6586_cov_42.5595 . gene 3501 5458 . + . ID=g1322;Name=g1322.t1 NODE_2359_length_6586_cov_42.5595 . mRNA 3501 5458 . + . ID=g1322.t1;Parent=g1322;Name=g1322.t1 NODE_2359_length_6586_cov_42.5595 . five_prime_UTR 3501 3733 . + . ID=g1322.t1.utr5p1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . exon 3501 3874 . + . ID=g1322.t1.exon1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . CDS 3734 3874 . + 0 ID=cds.g1322.t1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . exon 4009 4236 . + . ID=g1322.t1.exon2;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . CDS 4009 4236 . + 0 ID=cds.g1322.t1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . exon 4366 4816 . + . ID=g1322.t1.exon3;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . CDS 4366 4816 . + 0 ID=cds.g1322.t1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . exon 5145 5200 . + . ID=g1322.t1.exon4;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . CDS 5145 5200 . + 2 ID=cds.g1322.t1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . exon 5377 5458 . + . ID=g1322.t1.exon5;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . CDS 5377 5418 . + 0 ID=cds.g1322.t1;Parent=g1322.t1 NODE_2359_length_6586_cov_42.5595 . three_prime_UTR 5419 5458 . + . ID=g1322.t1.utr3p1;Parent=g1322.t1 #PROT g1322.t1 g1322 MAAVAHGQRDAPVNTQEAAKRALAERENYLAEIRLSLQSNRWIFTEEELNDSPSRRQGVSFDGERFFRLEGPYFMNEIAKRLEIPQLALATAIVFFQRFYCHQSFSVFNPYAMARCCLLLGSKVEESPRRIRDILVCSHYQQTMMQGKSKSAGEKLEEGSRTFLDYKEELCINERILLQTIAFDFNVIHPYKHVVKMLSYEDLGFDAKETGVAQTAWSAVNDSLVFGSTLCLRYPAVVVAIALIYFAAGRTGFELPSNWYTKYVPSLTRKTIDDICNDMSAHIEYVRPLLPVLQVAEKSRPKDSA* # PASA_UPDATE: g2786.t1, single gene model update, valid-1, status:[pasa:asmbl_7198,status:12], valid-1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . gene 199 1764 . + . ID=g2786;Name=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . mRNA 199 1764 . + . ID=g2786.t1;Parent=g2786;Name=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 199 306 . + . ID=g2786.t1.exon1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 199 306 . + 0 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 481 648 . + . ID=g2786.t1.exon2;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 481 648 . + 0 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 762 828 . + . ID=g2786.t1.exon3;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 762 828 . + 0 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 948 1025 . + . ID=g2786.t1.exon4;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 948 1025 . + 2 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 1176 1414 . + . ID=g2786.t1.exon5;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 1176 1414 . + 2 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . exon 1581 1764 . + . ID=g2786.t1.exon6;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . CDS 1581 1712 . + 0 ID=cds.g2786.t1;Parent=g2786.t1 NODE_4292_length_1862_cov_40.7722_potentialcontaminant . three_prime_UTR 1713 1764 . + . ID=g2786.t1.utr3p1;Parent=g2786.t1 #PROT g2786.t1 g2786 MTSFCLHMRQWTVTETANVIIAPNSPVTKTRAESDPTPALSRIRRESTSSMDASAPSSTPRTATAAVAVPSQSMQTQSLLTNPILSRLTPRETSRLSLGIDAGATALEGEGTQQTAMFDIEGFAEAPVEGPVLHDEPDDQDSTDVLSSSPWAAALTTPQSQSMRPRSGLAAAMAASSVVLSSSMPVGIPAPRSGEWRPTAFEDVDDKSDSDEDDGAMPASIPRTLPRHEQLAASMRELSLKSYRQDSTFAFGDLPSRKPSVII* # ORIGINAL: g4863.t1 original gene structure, not modified by PASA NODE_3491_length_3343_cov_46.3035 AUGUSTUS gene 91 2100 . + . ID=g4863;Name=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS mRNA 91 2100 . + . ID=g4863.t1;Parent=g4863;Name=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 91 241 . + . ID=g4863.t1.exon1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 91 241 . + 1 ID=cds.g4863.t1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 432 624 . + . ID=g4863.t1.exon2;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 432 624 . + 0 ID=cds.g4863.t1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 843 928 . + . ID=g4863.t1.exon3;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 843 928 . + 2 ID=cds.g4863.t1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 1149 1302 . + . ID=g4863.t1.exon4;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 1149 1302 . + 0 ID=cds.g4863.t1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 1579 1743 . + . ID=g4863.t1.exon5;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 1579 1743 . + 2 ID=cds.g4863.t1;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS exon 1955 2100 . + . ID=g4863.t1.exon6;Parent=g4863.t1 NODE_3491_length_3343_cov_46.3035 AUGUSTUS CDS 1955 2100 . + 2 ID=cds.g4863.t1;Parent=g4863.t1 #PROT g4863.t1 g4863 FPRTEQLSLLAATRVTQYNITANCDFTDPTCKFTQGPNVDYFIAGIENFTVMFDHTMYAVGVDVQRNAQDLKGSLKDSSGNVIPNSGVGIPGKADIVSIQTLLQAAGIDSLDIPSLAKNTRSGDQSHRYNGLVLLVLLEYSNQVSFNMHRIEYVMRVLQIEETEFKAEETILIPTLTAGLQQSRHGVRIIVIQTGTIGKFDFQTLLINLVSGLGLLAVSTLVIDILAVMVLPEREIYESYKFDETFDFSDIRDGLVHLDDDPTLAASRKKRKSSAVPGSMHTPLLEDGDRGAASYSE* # ORIGINAL: g2182.t1 original gene structure, not modified by PASA NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS gene 6313 6612 . - . ID=g2182;Name=g2182.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS mRNA 6313 6612 . - . ID=g2182.t1;Parent=g2182;Name=g2182.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS exon 6313 6612 . - . ID=g2182.t1.exon1;Parent=g2182.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS CDS 6313 6612 . - 0 ID=cds.g2182.t1;Parent=g2182.t1 #PROT g2182.t1 g2182 MFGPDGEDTGPMEGVILDIVPHERVVTTDAYAAGWVPQTPFLTAIWTFADEGDGTRFTATARHWDAEAKQRHADMGFHPGWDDMMAQFKALCETSAASA* # ORIGINAL: g2180.t1 original gene structure, not modified by PASA NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS gene 181 672 . - . ID=g2180;Name=g2180.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS mRNA 181 672 . - . ID=g2180.t1;Parent=g2180;Name=g2180.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS exon 181 672 . - . ID=g2180.t1.exon1;Parent=g2180.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS CDS 181 672 . - 0 ID=cds.g2180.t1;Parent=g2180.t1 #PROT g2180.t1 g2180 MQAVQALEAASEKIDSALKGPLSFMDNKWVHTLVTVLIILYASMAAPNLPPSFKSVFNHPIFQIIVLFVIAFTASKSPTVAVLVSLGLVLSLHALNKHDVPKIVSDEVKSVFKKHKKRETRQPTRQAGPSAVKAEDVARVPEENQAPNEVSAMSSMSDMYAAA* # ORIGINAL: g2183.t1 original gene structure, not modified by PASA NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS gene 6777 7326 . - . ID=g2183;Name=g2183.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS mRNA 6777 7326 . - . ID=g2183.t1;Parent=g2183;Name=g2183.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS exon 6777 7326 . - . ID=g2183.t1.exon1;Parent=g2183.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS CDS 6777 7326 . - 1 ID=cds.g2183.t1;Parent=g2183.t1 #PROT g2183.t1 g2183 DLGRDVRTGRHPRRRGRGRLTSIAPCLWFDGQAEEAAHYYVGIFGGSVDHVSYYPDENLSPSPMQGGSVLLVEFTLFGQSYQALNGGLQYHFDEAISLSVGCEDQAELDRYYDALTGDGGKDGACGWVTDRYGLCWQLVTRQIMANYHSDDKAAIARMVQAMMTMRKLDTAAMQAAFDGKTT* # ORIGINAL: g2181.t1 original gene structure, not modified by PASA NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS gene 770 4375 . + . ID=g2181;Name=g2181.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS mRNA 770 4375 . + . ID=g2181.t1;Parent=g2181;Name=g2181.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS exon 770 4375 . + . ID=g2181.t1.exon1;Parent=g2181.t1 NODE_2194_length_7326_cov_36.7755_potentialcontaminant AUGUSTUS CDS 770 4375 . + 0 ID=cds.g2181.t1;Parent=g2181.t1 #PROT g2181.t1 g2181 MSVQKDVRHTFFRRRGHPADSDHHYNGYAELLNSTELFLPKRILVRRSDFDKTSQTISKTYFEFFNLSYGAPFCTDEYQRKRPLTVEECIQRDMTYEMPLIGSFHMIEEIWTGSENDDTAAPSLTMTSSRILHTYTGEVILFVPCLVNGAFIIDGKEKVVIPYERTRTNIPFVTNSKKGLVVSMISKSKQGEASQYIKVLDGGKHSLLIEINQIFEKPVSVFAVIKAMGITSDKELCDAMGSDQRILTALLFHLQRWKATQTQNPQNSHSELPIRERYRKSFPNNVMPHITRGDARTKAVHLAFMTKMLLEAMNGMRQVDDIDHYRLKAFDHVGDILLPTFRLGVKNMVRLCKKNLSRAQSDIATDANLTVRWDPVKFKTIVHSFMMSGLLKTTNDHQKCGVVQSPTHISRIQSDCLKRQISSSVANTRSRSTKPREYHPSTAYFVSPVETQEGGNIGLDKQLALSATFATSSLEHVDNILEIVQPFLATTNAGSSLFIHGEIVGYTTRANDLLAAVRSYKLSAPFESSAKFIGIVCDRAAKTINIVFEGGRLVRPVLVVTDGSLVLNSFNLSVDNIPYDCWEDLYDETLGAFEYIDSWEADYLLIATTQSELQLRARQLNMAPPTGRLSALPGITHTHCEIVPSLMLGTVSANIPLSPSNPSPRNAYESAQMKQAISRVSLNPDNIEATQYELLSPQRSIMITQYMQKINECGGGQNVVVAFMSCLGFNLEDSIIMSAGAIDRGLFNTNLYKVYSDACCMVNDKHAFPPPTSATKRSADVSHLDEMGVARIGTKLAEDMVVVGKVITDGQESVDKSVLVKRHELGVVDRVIKTKNAAGYSLVKVRSTHMKPAETGDKFSSRHGQKGTIAKIMPEEDMPYMENGVRPDIIFNPHGIPSRMTIGQIKEMVLATYGAMVGTHIDGTPFEEVRSVVDHALPSIDPTNGRVLTMEEAADAITKMLGLSEGCTTVMYDGLTGEPLQSTIFAGVAYYQRLKHMVSHKIQARKAFSTGKRANRCIITRQPVGGRVKDGATRVGEMERDCLIAHGLAKFIEEKYMQLCDEHKTIVCNSCNNIAYPLASMRVACSRCKSVFPTLSPDEHHGQCVKCKKAELANYPILTYSCGDCGESCVTPLFDIKATAVHFKEFEMACRRCPAGVMTATMPYGCKECPEPHDLSAVRLPFAFIAFMNYLKIMGINVAIN* # ORIGINAL: g7811.t1 original gene structure, not modified by PASA NODE_2226_length_7168_cov_36.9845 AUGUSTUS gene 2985 5799 . + . ID=g7811;Name=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS mRNA 2985 5799 . + . ID=g7811.t1;Parent=g7811;Name=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 2985 3201 . + . ID=g7811.t1.exon1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 2985 3201 . + 0 ID=cds.g7811.t1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 3587 3762 . + . ID=g7811.t1.exon2;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 3587 3762 . + 2 ID=cds.g7811.t1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 4025 4381 . + . ID=g7811.t1.exon3;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 4025 4381 . + 0 ID=cds.g7811.t1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 4615 4719 . + . ID=g7811.t1.exon4;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 4615 4719 . + 0 ID=cds.g7811.t1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 4984 5247 . + . ID=g7811.t1.exon5;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 4984 5247 . + 0 ID=cds.g7811.t1;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS exon 5689 5799 . + . ID=g7811.t1.exon6;Parent=g7811.t1 NODE_2226_length_7168_cov_36.9845 AUGUSTUS CDS 5689 5799 . + 0 ID=cds.g7811.t1;Parent=g7811.t1 #PROT g7811.t1 g7811 MFGGHSHSHGGEECHGHGNKSSDFTNGGWASSQSQSVFGGSSSVQYQPSKISADALVDSSIMRGGIDPRRPSDATAAELMSTNRFDVLVERARENKAVVHERDSEGRTSLHWAALNNQLDVVREFISLGAEVDARATNLQTPLMWAVTKGHLRMTRVLLGCGADPNAADSLGATSLIIAAQFGEAFAVQLLARGGAKLDVGDSKGCTAVHWAAHFGKTKVLLVLKNLGADMDAKDHGGMTPVHRAVEGDQGEALRYLKEECNASMRTVDGRGESPADLAKRIRNTSVLHIVSSPKSGNMAAGKAASMNRYKYFPPAFYLFSCFLTVYAYYTWLQFVPYDEKGLFHIALQLLFPLTMVSYVILVRMDPGFVPVKSGGRSVMDGLIWTLDNPDAPEPKIESICLYCNVLRV* # PASA_UPDATE: g7810.t1, single gene model update, valid-1, status:[pasa:asmbl_3816,status:3], valid-1 NODE_2226_length_7168_cov_36.9845 . gene 483 2408 . + . ID=g7810;Name=g7810.t1 NODE_2226_length_7168_cov_36.9845 . mRNA 483 2408 . + . ID=g7810.t1;Parent=g7810;Name=g7810.t1 NODE_2226_length_7168_cov_36.9845 . five_prime_UTR 483 555 . + . ID=g7810.t1.utr5p1;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . exon 483 1076 . + . ID=g7810.t1.exon1;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . CDS 556 1076 . + 0 ID=cds.g7810.t1;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . exon 1313 1463 . + . ID=g7810.t1.exon2;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . CDS 1313 1463 . + 1 ID=cds.g7810.t1;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . exon 1850 2408 . + . ID=g7810.t1.exon3;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . CDS 1850 2395 . + 0 ID=cds.g7810.t1;Parent=g7810.t1 NODE_2226_length_7168_cov_36.9845 . three_prime_UTR 2396 2408 . + . ID=g7810.t1.utr3p1;Parent=g7810.t1 #PROT g7810.t1 g7810 MSQTNELSNNNGSSSSNNNDNNNTAQHGTNVLASRQCHLDRSADERVDQLNDTFPVIDWTVTAAAWLSSPPEDGTDEHRFPDGISQMVETIQEVSESSIELLRGFLARFWTKYGASFEIYWESLSNAQKRAMIRTVAPGMPEHPGEHRKLSCILVPEMTIRYLLMSSATTKPMSATRQMRAWAESSAKDTRLDCAKYVSKIFHLLQLCPGASLSQAPLSCDHGLFYHVKNGEAFEIHKDVFQTRQHAAVSQLISEMIDDGSLVTRSQWHYIQLWEHMTLSTLAFLAEEYRTTVCGKNARRGLVDSVLVTCANCGKSAATDTKGVRRCPTCRMVPFCSVECFAAKWDAHKLTCTGKESRQMATAGALGVIDTEQATDTDDCGTTADSTPAAHLGEAAPEDPFLTPD* # ORIGINAL: g14421.t1 original gene structure, not modified by PASA NODE_4530_length_1494_cov_29.9232 AUGUSTUS gene 37 1494 . + . ID=g14421;Name=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS mRNA 37 1494 . + . ID=g14421.t1;Parent=g14421;Name=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS exon 37 132 . + . ID=g14421.t1.exon1;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS CDS 37 132 . + 0 ID=cds.g14421.t1;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS exon 488 610 . + . ID=g14421.t1.exon2;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS CDS 488 610 . + 0 ID=cds.g14421.t1;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS exon 946 1058 . + . ID=g14421.t1.exon3;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS CDS 946 1058 . + 0 ID=cds.g14421.t1;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS exon 1270 1494 . + . ID=g14421.t1.exon4;Parent=g14421.t1 NODE_4530_length_1494_cov_29.9232 AUGUSTUS CDS 1270 1494 . + 1 ID=cds.g14421.t1;Parent=g14421.t1 #PROT g14421.t1 g14421 HRAASVVPQRMAEMEEAIRNRDYQTFARLTMQDSNQFHAVCLDTYPPIFYMNDISRTVVYIITRYNAFHGTIKAAYTYDAGPNAVIYLLRENVPEVLALLKHYLPPTDAQSFYKGLHGQHSFDAPLSEELLAAINLPVHHDGLKYILHTKVRCIFLPLYTSLLLSLSHHPLDTSSLSLDTSSSPL # ORIGINAL: g13689.t1 original gene structure, not modified by PASA NODE_581_length_20664_cov_48.7294 AUGUSTUS gene 19489 20522 . + . ID=g13689;Name=g13689.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS mRNA 19489 20522 . + . ID=g13689.t1;Parent=g13689;Name=g13689.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 19489 20055 . + . ID=g13689.t1.exon1;Parent=g13689.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 19489 20055 . + 0 ID=cds.g13689.t1;Parent=g13689.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 20290 20522 . + . ID=g13689.t1.exon2;Parent=g13689.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 20290 20522 . + 0 ID=cds.g13689.t1;Parent=g13689.t1 #PROT g13689.t1 g13689 MSASETYARGLVPPGTLTDAEKSFVDAVHEYDSHAPEEHHHEHDHDHDHDHDHDHDDHHHAEDAPLKGGRSKARVTTFVYVLTAFSAIGGFLFGYDTGVVSGAMLLIKDEFDLSDTQQEIVVSAAIAGAIGGAASGGYLNDRFGRRPVILLASVVFMIGSIIMSAAMQWTTLVAGRVVVGIGIGFASMTVPMYIAEAAPSHLRGKLVTINNLFITGGQFIAGVIDGSFANVPAGWRYMLGLAAVPAVIQFAGFLVLPESPRWLLSK # ORIGINAL: g13688.t1 original gene structure, not modified by PASA NODE_581_length_20664_cov_48.7294 AUGUSTUS gene 16431 18413 . - . ID=g13688;Name=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS mRNA 16431 18413 . - . ID=g13688.t1;Parent=g13688;Name=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 18402 18413 . - . ID=g13688.t1.exon1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 18402 18413 . - 0 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 18194 18307 . - . ID=g13688.t1.exon2;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 18194 18307 . - 0 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 18025 18073 . - . ID=g13688.t1.exon3;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 18025 18073 . - 0 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 17613 17861 . - . ID=g13688.t1.exon4;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 17613 17861 . - 2 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 17245 17343 . - . ID=g13688.t1.exon5;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 17245 17343 . - 2 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 16989 17032 . - . ID=g13688.t1.exon6;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 16989 17032 . - 2 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 16712 16808 . - . ID=g13688.t1.exon7;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 16712 16808 . - 0 ID=cds.g13688.t1;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 16431 16516 . - . ID=g13688.t1.exon8;Parent=g13688.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 16431 16516 . - 2 ID=cds.g13688.t1;Parent=g13688.t1 #PROT g13688.t1 g13688 MNTKIAAILVLVLAAACGSANARVTVSLPKPNNVGLDLCPTCVSFAGQGISQLLSIIANAGVIGTCGQLCGDLKNATGSGALGLACNLFCDYEGIKAFIAVIDKADLDPIYFCELLNQCSVNDNGDAKVAAFTVSPASGPQGTTFTITLQFTSANGTGTGQINLDIETVDQESLGSSNLLESQKAGNYQVSWQVDASPDPDCDPTEDDCEDWDAGDYPVSVALCNGQCGSKHPHSAIYATASAKFTITA* # PASA_UPDATE: g13687.t1, single gene model update, valid-1, status:[pasa:asmbl_8305,status:12], valid-1 NODE_581_length_20664_cov_48.7294 . gene 10728 15211 . + . ID=g13687;Name=g13687.t1 NODE_581_length_20664_cov_48.7294 . mRNA 10728 15211 . + . ID=g13687.t1;Parent=g13687;Name=g13687.t1 NODE_581_length_20664_cov_48.7294 . five_prime_UTR 10728 10980 . + . ID=g13687.t1.utr5p1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 10728 11094 . + . ID=g13687.t1.exon1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 10981 11094 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 11315 11410 . + . ID=g13687.t1.exon2;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 11315 11410 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 11656 11802 . + . ID=g13687.t1.exon3;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 11656 11802 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 12039 13010 . + . ID=g13687.t1.exon4;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 12039 13010 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 13420 13601 . + . ID=g13687.t1.exon5;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 13420 13601 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 14037 14315 . + . ID=g13687.t1.exon6;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 14037 14315 . + 1 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 14573 14711 . + . ID=g13687.t1.exon7;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 14573 14711 . + 1 ID=cds.g13687.t1;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . exon 14969 15211 . + . ID=g13687.t1.exon8;Parent=g13687.t1 NODE_581_length_20664_cov_48.7294 . CDS 14969 15211 . + 0 ID=cds.g13687.t1;Parent=g13687.t1 #PROT g13687.t1 g13687 MASPEETPQPQNPSPSGSSTSVASGAPAVRGWFDLQMQIMRQMLDYESDRLKSLQRQMEEVYSAPESLEKSYTRQEKNLERVKQQYDQLRREVQELSEVRITRQRSLPTLGLDKTPKKRVSMMTLVRACSDPAMNQRGSARAVFDADGCTVEGAEEGEGADGDPPTASPQTRRTFSAIGDGHEPTAVTGPRSVTTDVSAQSPSAASSSSAARANRQMVRSASTPMPGDGDVSDDDTLLNARGSETPTSGLTTPEMRSPRTSPKIARARSPIPMATAGTTRTDALSEIAYHADRIVSGPLDALIQKLTPSMEYYPDTKYMFTFLLTFRIYTTGVELMEKIFESFIALTKRTVEEGATHPNPNPPMPSSPAASMRSTTNLTAASKVNVVTLRFLNLLKKWIETFSYDFRDDKMMARLENMFKACLEVDTGFADVVQQLRTSLTTRLRALEEEERRHQALEAAREDGRGSGPGKVNKMISVMDITSDTNELSKQMLIIDIERFKAISPEEFVQTLPTKEGVPDIVKTLSNLGAYVQWFNRMSYWVATEIVGQASLKDRVTLIERFVKVAKNCKRLHNYNALMGIVAGLNMSPVQRLKKTWTLCSNKTTSDLRDLELAMSPAGNFKNYRDILSVPDADAKPGSFCCVPFFSLMVKDLYFTVDANPNRLPNGHVNFEKLWQLSDRVTMIMRFQQSHCAFEPNTAVKQYVETARVLDEKSLYEASKKLE* # ORIGINAL: g13686.t1 original gene structure, not modified by PASA NODE_581_length_20664_cov_48.7294 AUGUSTUS gene 2838 10435 . + . ID=g13686;Name=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS mRNA 2838 10435 . + . ID=g13686.t1;Parent=g13686;Name=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 2838 8377 . + . ID=g13686.t1.exon1;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 2838 8377 . + 0 ID=cds.g13686.t1;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 8616 8891 . + . ID=g13686.t1.exon2;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 8616 8891 . + 1 ID=cds.g13686.t1;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 9140 9338 . + . ID=g13686.t1.exon3;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 9140 9338 . + 1 ID=cds.g13686.t1;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 9538 9735 . + . ID=g13686.t1.exon4;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 9538 9735 . + 0 ID=cds.g13686.t1;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS exon 10025 10435 . + . ID=g13686.t1.exon5;Parent=g13686.t1 NODE_581_length_20664_cov_48.7294 AUGUSTUS CDS 10025 10435 . + 0 ID=cds.g13686.t1;Parent=g13686.t1 #PROT g13686.t1 g13686 MIRLPSKLRRSVWPLRRMRCVRGSCQWNDCGILLSAAVFVFALAMNSCAALSPGPPSGLTFGHKESGRGISDVTSRAQLPLRRAAVSVSDPSAVAMTPTHSIGNNVADSAPQTRQRVQIANPTIDDHERPARLTTQSTPPESVSESVSVGSRIQEIRRETLVEPSHNDSEGDVGLLLAEIRRDIGSGAPEDAEALSENDLGDASFLSIISLLATASTSNATRLTDLGDLHVDQGVLVFVLPPRSSMPWSVASDVGGGIGGNSPSGAGVTAVPATSLPLSGTWRSVDYAGVRFDGNGAVIACGDVEPLSLLLNGGQMSITRVSVEGCTGVFGALSGVPGSQEATNHANTTSTLAADGNGVKALFDVAAGATLRLSDTVFRHLRNVRVATVAGIVHATRTTLLNSTLGDDLSVSGIATVCGEDDDCGGGALLRMVGAAEGILEDVLVECTGCIAVCSGGTLVLTDNSQLVATRLIVLGGIGNNGGVVWLSDASAFHADSCMFANTRAMHVGGVAVLRDRSVAMFSNCSVENTWAHGSYLNNDQTDFSSMLPLVPPASIIAAGVVSASGSSVFSVDGLVLSNVWTIGGAPAFVARENATMVLQSTDVVSTALGDVGGLVHMYDASVVSVSALNHHFHPQSLQTDSGQYTALFLCDDRASLDVSASVFLMLFSPVPFVLLRAQSTATLRGLRVASSPIFVFERYTLLLWSIHASHLHLEDSNFENVQAWLNVMTLSDDARVTINGLRLQGASAFASMTSRAILEIRASELVDLLAIAQLDIDSIVRMHDVSVSHVIAGGFVVEGSSIVEIASCRFVNISTFHVPTWMYEENAIGPNELVFFMSGGFAKLLDSSRMVVKDTSVVGARAELAGGAFFMVARAQLTLEDCNITDARVTMDAQFWRDFLQRGIQAIPDLLIPAYLQHAPFGGLLASLILPTDPGHPELEDMKQRVQLTRVTLSDVSTTGKGGVFFMGATGTTITINSMEVTRASAGFGAGFLDARTDVSVIATGLIVSNCSGQYGGVFGMHESSNLTVETSRFDNVRAETTGGFVHAQDSVHATIISTVVSNARATNGAVFCLQDAARANITLLSVDNAVALHAGGVASLFDDSFATFDTVRVVQAHAGTDGGVISLVARSYASLSDVFVTFFSAAENGGFVSATDDTNLHITRVHLEDGHGKRGGALRIAVFARATASDIHATDVLSQLEGGFAAVQGDSHLNITKLNVRRASAKIGAVLHVSGTAIVDCNTTEAVDMHALFTGGFAHVQNSGVVFVYRLDPLVNATAARGGAFSLSESALVVVESSAIRNSSARVSGGFVFAALESRLVATSISVHGTTAPIGGMVHAMDSSVVTVTNSLVDRPSAVKHGGVARVETDAALSLTNVTILAASVQEKGGVISLEDSAVVSVASTSVYGAHAGTFGGFAWVGGAANMSAMNVILNGGNARSGAVLYADEESTSVLTGMTVRGATAQSSGGCLYIAQTASVSVGGGVYLDCRAGATTTTAGAGGVAFVERGARLTITFPTTFVSPGAVLGPAFYSEGALDSVTRNNANVTGPLYSPLDVQAVLPGWASGPTFSSAPVVMEARFANGDIATALSVVPGAELPAFRLWVRDLYGNSLSIDARKPLAVRLGIFNGSADTPGGVGVRSLADGVAVDPVLRGDTERSFGLQPSVLFESLRLFAQRGTYRLGIVSPNPFLYGRLDQTASNSRLLDTFALTVSVGDCLQGQVLQDTASGPSCVDIQASAGSSNVVTIAAATSVVGALIVALLVFALLRWRLMSIRLAESRATHKEFLAKHVANNATLGALELPPDTVELFEKLGEGEFGVVVRARVIFNGRPRVCAAKMMKPGATFDQRCDFVSEADVMQGLHHPHVVSLCGVVLTFEPMLILLEYVPYGSLLSFVRAIPATQRYNPHTADMLLTFCSHIASGMAYLAQMHVVHRDLAARNCMVGQDSFGEYQIKVADFGLSGTSGDKNYFRKQEKPSRVAEKLPIRWIAPEIVCDRKFDSASDCWAYGVTCWEVFSYGAIPYSTMTGTAVVQYLNGGGRLSRPDGCPPQIFDMIISPCWHAERECRPTFEELTKIVFPDNNDGSAQRITSVGGVSKGIGFDGISKINSTAPVDSFNPTGLGYAREDSGYVNMQTAPQEIGIDMAASSSMAPIRSGVSEVKTAPSLSPYDNVLVEILLLSVEPSVPGSTARSTSTVDVYETLV* # PASA_UPDATE: g6766.t1, single gene model update, valid-1, status:[pasa:asmbl_8136,status:12], valid-1 NODE_550_length_21373_cov_46.1399 . gene 14244 16689 . + . ID=g6766;Name=g6766.t1 NODE_550_length_21373_cov_46.1399 . mRNA 14244 16689 . + . ID=g6766.t1;Parent=g6766;Name=g6766.t1 NODE_550_length_21373_cov_46.1399 . exon 14244 14513 . + . ID=g6766.t1.exon1;Parent=g6766.t1 NODE_550_length_21373_cov_46.1399 . CDS 14244 14513 . + 0 ID=cds.g6766.t1;Parent=g6766.t1 NODE_550_length_21373_cov_46.1399 . exon 14772 16689 . + . ID=g6766.t1.exon2;Parent=g6766.t1 NODE_550_length_21373_cov_46.1399 . CDS 14772 16658 . + 0 ID=cds.g6766.t1;Parent=g6766.t1 NODE_550_length_21373_cov_46.1399 . three_prime_UTR 16659 16689 . + . ID=g6766.t1.utr3p1;Parent=g6766.t1 #PROT g6766.t1 g6766 MVGYSGSGNGGAAASSEFSLGIPGAEWSSDPEYQRYLEELTSASLDRLTHEPQRLATQQKEIIEEMRRLAFKNYKAFVRTAETSRAVLKDFVTVSDRASRLLDALPSFAQRCEDFQATARAIAGDRRLNAVALQHHPRLLELLEMPQLMDTCVRNGYYEEALDLDACLTRMAARHQDAPILAAMAREAKASVSFMLAQMLASLRQTVQLPACLRTVGHVRRLGVFGERELRLKFLHARDAWLQSMLAQCQHTPAGASGASGAAGGHGTSSSGASSFRSTDHSHASRLIDASRVHLFDIVTQYRAIFADDSAGADGAGGGSGGSSGSSGSGDPLLYEWTLLKVDEFLRSLATQLGRVREGAVFSSLLGQCMYFGMSLGRVGLDFRPLVMPLFEHAIGAAFVAATEPIAPQFARSLETHSLARPHAALNTAAAGMSSSSSHPGKSEGLAPPPSLLDYPPLAVATNGILSALNELRQCAPVGIARRIATHLATCLSRMAAALAALHARRSTAFSAEEREMFGIVCASFCADFVPLIERCVNAVYKSVLRLPFEAAEGSDAQSPAALLAGFVASSVVAARPSWPHATPTSVPASAAAVTSAAPAVTSAVTPGTEGSDSYHGSHVVHTGTSVQEHADSAGNLNGTESQSASIGDADQQQHRRHPQDPQHQHHQQHGGVLSESVGKASQLIGDVPPVSAADGPTFALDGEDDVASAAASAAPSG* # PASA_UPDATE: g6767.t1, single gene model update, valid-1, status:[pasa:asmbl_8135,status:12], valid-1 NODE_550_length_21373_cov_46.1399 . gene 16699 17896 . - . ID=g6767;Name=g6767.t1 NODE_550_length_21373_cov_46.1399 . mRNA 16699 17896 . - . ID=g6767.t1;Parent=g6767;Name=g6767.t1 NODE_550_length_21373_cov_46.1399 . five_prime_UTR 17869 17896 . - . ID=g6767.t1.utr5p1;Parent=g6767.t1 NODE_550_length_21373_cov_46.1399 . exon 17813 17896 . - . ID=g6767.t1.exon1;Parent=g6767.t1 NODE_550_length_21373_cov_46.1399 . CDS 17813 17868 . - 0 ID=cds.g6767.t1;Parent=g6767.t1 NODE_550_length_21373_cov_46.1399 . exon 16699 17241 . - . ID=g6767.t1.exon2;Parent=g6767.t1 NODE_550_length_21373_cov_46.1399 . CDS 17085 17241 . - 1 ID=cds.g6767.t1;Parent=g6767.t1 NODE_550_length_21373_cov_46.1399 . three_prime_UTR 16699 17084 . - . ID=g6767.t1.utr3p1;Parent=g6767.t1 #PROT g6767.t1 g6767 MVFATFSALARRYTMAQVRHLRRQREVMAKQEAYHKSRRPQGPKSLFLADLRRELAEARAQGPETSRPVQ* # ORIGINAL: g6764.t1 original gene structure, not modified by PASA NODE_550_length_21373_cov_46.1399 AUGUSTUS gene 685 8697 . + . ID=g6764;Name=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS mRNA 685 8697 . + . ID=g6764.t1;Parent=g6764;Name=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 685 782 . + . ID=g6764.t1.exon1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 685 782 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 1035 1200 . + . ID=g6764.t1.exon2;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 1035 1200 . + 1 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 1387 1492 . + . ID=g6764.t1.exon3;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 1387 1492 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 2072 2173 . + . ID=g6764.t1.exon4;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 2072 2173 . + 2 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 2434 2486 . + . ID=g6764.t1.exon5;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 2434 2486 . + 2 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 2618 2701 . + . ID=g6764.t1.exon6;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 2618 2701 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 2959 3029 . + . ID=g6764.t1.exon7;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 2959 3029 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 3174 3345 . + . ID=g6764.t1.exon8;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 3174 3345 . + 1 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 3518 3536 . + . ID=g6764.t1.exon9;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 3518 3536 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 3912 3985 . + . ID=g6764.t1.exon10;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 3912 3985 . + 2 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 4354 4524 . + . ID=g6764.t1.exon11;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 4354 4524 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 4681 4764 . + . ID=g6764.t1.exon12;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 4681 4764 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 5018 5190 . + . ID=g6764.t1.exon13;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 5018 5190 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 5457 5566 . + . ID=g6764.t1.exon14;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 5457 5566 . + 1 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 5816 5880 . + . ID=g6764.t1.exon15;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 5816 5880 . + 2 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 6095 6233 . + . ID=g6764.t1.exon16;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 6095 6233 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 6498 6658 . + . ID=g6764.t1.exon17;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 6498 6658 . + 2 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 6845 6886 . + . ID=g6764.t1.exon18;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 6845 6886 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 7111 7319 . + . ID=g6764.t1.exon19;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 7111 7319 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 7591 7705 . + . ID=g6764.t1.exon20;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 7591 7705 . + 1 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 7904 8230 . + . ID=g6764.t1.exon21;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 7904 8230 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 8524 8697 . + . ID=g6764.t1.exon22;Parent=g6764.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 8524 8697 . + 0 ID=cds.g6764.t1;Parent=g6764.t1 #PROT g6764.t1 g6764 MCKELLQLRRDALRQLWVEHVENKEMIRLIEKIDEIQKIPDQVDMHVTARRHLHAARLLVDALRKLEGDLEDVGALRELKLALKTRRDKMAEQLVDELHDIVYLRAEVAVASAGPLTHAEMPDGLTSSGSDGRTSRAGSVLSPEGRPAGLQAARTASVSSVLSEPATATPSLMAGQPEGEGTDRIAVIMEALSLMDKVADAVKTIQQRLKHEVTVIAENVLSAADERLFREAGSAAALKSRAELAAERPASVLLPVLEVLFGQLRKVMACHGRVIGAVQERMPRTQSVDGDASQGAHKAAGSYSEGEVWSAVQMEVQTVLCDYLRIPRDPQTGLPAAMSSTKALSSEPFGDGDALVDAASFFTAKREGRKVKQPLFRFSNSTYALSVVTQQKEDAKTDGRPHRTSEDKYAAAAALLTDTLLCPADARNVTVLYGPVARFTRDAPAAFGVSSASLASLSGAQAPSLRGFLDSFVRESYLRQLRDNFAARAKAAMEGPDAFKLPGNARGLFESRCLVQSTLAMESLAKEVCAIVQQLPWYAADFVAMLGSIFTRYNDVAAATFRGIIHGNGLRPTSAAGGTDFVILSGRWAEDSRIVDIIRQHPIFAQHLTAHEISEPSDAWRTDLAWMYDEEYALERDLLGDEPVRKTNVILDTGTLKIVAHIHESMEWLAARLAASVDAIERTPVPVIAADAEPPAADLGPVRAIVRDLQELASSCLRVLRIEIHCHCHHFLLPAVQKSNHMCEGEAVEPDPLVVRLNKDLSAIDDAVASQMHPSKARFLFDGLAHLIGAMLVGNAGHIRKINLSGCTKLCRGIAAMAQNLTNITMAHPGPLERAKRYFELLRSPREEILSSIRHDGPLFSRDEYARIFALMQASDLHGKQSNAGDYGPLLDAALAAAKQHVHK* # ORIGINAL: g6765.t1 original gene structure, not modified by PASA NODE_550_length_21373_cov_46.1399 AUGUSTUS gene 9118 13074 . - . ID=g6765;Name=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS mRNA 9118 13074 . - . ID=g6765.t1;Parent=g6765;Name=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 12892 13074 . - . ID=g6765.t1.exon1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 12892 13074 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 11999 12265 . - . ID=g6765.t1.exon2;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 11999 12265 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 11766 11789 . - . ID=g6765.t1.exon3;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 11766 11789 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 11312 11548 . - . ID=g6765.t1.exon4;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 11312 11548 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 10708 11147 . - . ID=g6765.t1.exon5;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 10708 11147 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 10191 10380 . - . ID=g6765.t1.exon6;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 10191 10380 . - 1 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 10001 10043 . - . ID=g6765.t1.exon7;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 10001 10043 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 9689 9876 . - . ID=g6765.t1.exon8;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 9689 9876 . - 2 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 9290 9427 . - . ID=g6765.t1.exon9;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 9290 9427 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 9118 9162 . - . ID=g6765.t1.exon10;Parent=g6765.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 9118 9162 . - 0 ID=cds.g6765.t1;Parent=g6765.t1 #PROT g6765.t1 g6765 MAMYYGGHPAADERVGADYEAALRELTFNSKPIINNLTLMADQHKRFAPAVVQAIEAKLRRTDPTGRLPFLYLLDSIIKNVGGEYVALFGQSIVSNYVATYEAVDERTRHSLRRLRATWDALFPGQKLAAIDQRMSAIDQRRPGGVRGDERGNQYFSPHQSPHYDSPVPAIIGGPPPPHPGWPAPVHPGHPVHPGGAPYGAPYGPQPAYPPYGPSAAQPPLLPPYGVQQEPQDIVRAIQAQLQSGTLSSAHYATLVDYLGQLVQQTSQPQLQPQPQPPVGMYGQPMPMPIAGYSMPLPPQQPPVQVPMHAPPQESTADILRRLTESGLFPSLYGNAPAVTPAPAQPIQPAVIQGDGALQQRVATPPVGTEPIRIDLSSTDAIKRRHDSVIDALYGGRPLQCTQCGLRFAADGKGPMAQHLDWHFRTNRREKERLKRPRSRRWCMTETEWIAYTELEDTEEKAPAFFDIGKKDDVAVPEEAVPSVSASEAGGADSCAVCGDKFEKFWDEQAEEWRYRNAVARDGKVYHPACAADVAIGNGAVGESEINGVTMGDGDVDGRMHAKRKAADVATTDDDAPSKRLKTE* # ORIGINAL: g6768.t1 original gene structure, not modified by PASA NODE_550_length_21373_cov_46.1399 AUGUSTUS gene 18310 20949 . + . ID=g6768;Name=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS mRNA 18310 20949 . + . ID=g6768.t1;Parent=g6768;Name=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 18310 19026 . + . ID=g6768.t1.exon1;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 18310 19026 . + 0 ID=cds.g6768.t1;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 19398 19574 . + . ID=g6768.t1.exon2;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 19398 19574 . + 0 ID=cds.g6768.t1;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 19772 20294 . + . ID=g6768.t1.exon3;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 19772 20294 . + 0 ID=cds.g6768.t1;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS exon 20597 20949 . + . ID=g6768.t1.exon4;Parent=g6768.t1 NODE_550_length_21373_cov_46.1399 AUGUSTUS CDS 20597 20949 . + 2 ID=cds.g6768.t1;Parent=g6768.t1 #PROT g6768.t1 g6768 MDRREGRRRHIDAHEDGGDGSDGSDGSDDDSSLSTGAWEQRRRMEVSELEEFERLERATSQQGYSRPDTLHAHPHSREEDNGRDRRGTAAEGRGLLHPPAHALAHTHTHTHAQAQSQAGGAQSNTHGRTHRTGATAPPSGGHTDELPLPVAVRRKMTELEDEIARFRGENARVAALRAEAEAEVHRMRTRSEEFEAYRAEETAKLRRERKVFETHTRSARASCGPERDFQAELSLLKQEVTALQDQMRLRDEKHSLAIARHKNRTNELSQKCAALDAEVVRLRGERDDLVVLVEKASHLTKTARLAADRSEVARARATLSPQTPTRRHSPVPPRALVTHVDATARTVGSDVSTRPDAPTRLVGGDVSTRTDAITVRSGDVSARPVGGDASARTPTVVSAPPAAPEEPHATQTADGTAVTTFPNGTRKEVRADGSSTVHFFNGDVKRTNPDGRVIYYYAESNTTHTTYADGLEVYRFGNGQVERHYADGSKEVVFPDATVKRILPDGAEVSSFPDGTVQRMSAGGEERVIEFGDGRRETHARDFRRRDYPDGTAKIVHADGRRETRYASGRVRIKDSAGALIYDGVGTHA* # ORIGINAL: g11768.t1 original gene structure, not modified by PASA NODE_1797_length_9179_cov_40.5447 AUGUSTUS gene 3898 9081 . - . ID=g11768;Name=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS mRNA 3898 9081 . - . ID=g11768.t1;Parent=g11768;Name=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 8996 9081 . - . ID=g11768.t1.exon1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 8996 9081 . - 0 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 8517 8771 . - . ID=g11768.t1.exon2;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 8517 8771 . - 1 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 8111 8185 . - . ID=g11768.t1.exon3;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 8111 8185 . - 1 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 7575 7694 . - . ID=g11768.t1.exon4;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 7575 7694 . - 1 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 7233 7351 . - . ID=g11768.t1.exon5;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 7233 7351 . - 1 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 6802 6965 . - . ID=g11768.t1.exon6;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 6802 6965 . - 2 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 6279 6428 . - . ID=g11768.t1.exon7;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 6279 6428 . - 0 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 5683 5874 . - . ID=g11768.t1.exon8;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 5683 5874 . - 0 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 5236 5305 . - . ID=g11768.t1.exon9;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 5236 5305 . - 0 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 4858 4994 . - . ID=g11768.t1.exon10;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 4858 4994 . - 2 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 4521 4612 . - . ID=g11768.t1.exon11;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 4521 4612 . - 0 ID=cds.g11768.t1;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS exon 3898 4045 . - . ID=g11768.t1.exon12;Parent=g11768.t1 NODE_1797_length_9179_cov_40.5447 AUGUSTUS CDS 3898 4045 . - 1 ID=cds.g11768.t1;Parent=g11768.t1 #PROT g11768.t1 g11768 MTGRLIDRRLEELGATRFALRGEGDDAGNIETDFEAWQTDFWRTFDANVRGIPVASAASSVSASASDAPSESLSAAQQLPSSSTQPTAPTSTFTSSVASIVATAPSQLGDTALPPRKYNVTLSGGSPILLRPFPATNFSGLDPSNPALLPVTEIRELCDPRSMMSCMHIELDACTTQLRYETGDHVAVYPENDRSLVAEIGELTASDLDANYAFSPVEAGIKSPFPNPCSGRNALSRFLDISRSPLPQTLRFLASYALQRKPSEAADILAMSKERYAADVKGQMINIVDVMRQFPSARPPLAMLMEALPRLHPRYYSISSASVVHPATVHVTPKVAEWQGGLPGAKSLRRGVCSGYMATLVKGDDVFAFVRTSKFHLPKDPATPIIMVGAGAGLAPFRAFLQERAHRIKTEGIRFGPSRLYFGARNSLSRLYADEIADAINCGAVTQYHEVFSHIPTGAQFVHEKFVADSDDIWNLLTQGGIIYICGGANGFGTAMTAAFTRLFMTHGGAGSEADAVARASQAMAAGRWLEDLAD* # PASA_UPDATE: g11767.t1, single gene model update, valid-1, status:[pasa:asmbl_2644,status:12], valid-1 NODE_1797_length_9179_cov_40.5447 . gene 2 3207 . + . ID=g11767;Name=g11767.t1 NODE_1797_length_9179_cov_40.5447 . mRNA 2 3207 . + . ID=g11767.t1;Parent=g11767;Name=g11767.t1 NODE_1797_length_9179_cov_40.5447 . exon 2 860 . + . ID=g11767.t1.exon1;Parent=g11767.t1 NODE_1797_length_9179_cov_40.5447 . CDS 2 860 . + 0 ID=cds.g11767.t1;Parent=g11767.t1;5_prime_partial=true NODE_1797_length_9179_cov_40.5447 . exon 1174 3207 . + . ID=g11767.t1.exon2;Parent=g11767.t1 NODE_1797_length_9179_cov_40.5447 . CDS 1174 2732 . + 2 ID=cds.g11767.t1;Parent=g11767.t1 NODE_1797_length_9179_cov_40.5447 . three_prime_UTR 2733 3207 . + . ID=g11767.t1.utr3p1;Parent=g11767.t1 #PROT g11767.t1 g11767 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHLGSGATISHVRQGSDVYIPYNPLDRNAGLIALFAGCRRLKFLRISNVHDIDFLRALGRSAPQYMKSLSLSRIDVTPSSADVIKGVDACVQFDKDLAFVLDAMQSLESLDVGSPGAGRETIAAIARHRNLQSVRFSWRTFPLLGGSMGKAKDGPDAATQHTDHAHMHGLDLSVLSASKALKSVAIELHHWQCQTRETDANGGASHALADAAVRKRGSITAVSDSVDVKGVDGMLQMTTHCAYPNACFGAQLFAAGADGKFPFVTEVTFAFYGTKSAPKSRYNPRRDPTDKTPPVLFGTLGGVNVGRRASLPDTPRGGLLGVTPRDLLKSPSAPRATTGGLGAVPEQRHGIPLIAISGIDGRDEPVKVLTAAEESADGRRRTRSMGSYSPFMDASVGVRRTPLAPPNTQLQVNSVPENALTSATSLTSIASEDSDSGSSALTSAGHSPIPSATPSPSTLRRVASGGHATAPPSSTSQLRATTQHTNTNTPPAAAAPAAVTDSEKSSDRKKSRRKSSLARIASLFRRRRTASESDASRSGKTTALLSPTSTATTNGAASPSVTTSVSASPSMTQLLGVQSHAAQPAPSPATSGTATTAAVTAKRSLSPTRGESSKGLSVSVPSSTTKQTVTKVSTTASSSQERHLHASSVDKNCESDSDAADAGSGLFNEHLAAAVASMSRACPNVRSLRLWKCEGVAGDVLVPVASGCGTLECVSFRRVGMREPLSLRCLFKSKALRELDLKIECSDRPSAVVFGDAVQLMSHGIHVKVAGGLGLL* # ORIGINAL: g1182.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 14575 18225 . + . ID=g1182;Name=g1182.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 14575 18225 . + . ID=g1182.t1;Parent=g1182;Name=g1182.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 14575 18225 . + . ID=g1182.t1.exon1;Parent=g1182.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 14575 18225 . + 0 ID=cds.g1182.t1;Parent=g1182.t1 #PROT g1182.t1 g1182 MSKKDLSDDIRWQVADLYFHTQDSVLVRHHLDSFDQFVENGIPSIMTATDNVFNTVEYPGMPGRLIRNRLEFREFSQTLPVRTYSELGGARRDVIMTPADARDQNRTYSGKLMAKVRQIQEIVDKATQTVLESEVVDSQERVVVSMLPIMVGSKFCTTRNTPVGEDSSSAECVMDSGGYFIIKGNEKVVIPQEEICRNKALVFNQKDSSGMHMLESQIMSQASLDGNGKSYMFRLRLRKGFKVTAVMSTFKDEIPLAILLRALGMETDNEIVSCTANSETDERMINILRTMLQGSYSKMTSLSPTATTSQSASASNSADNAANDSLLTGDKARQYLSTLINNKYREKSTVSNVIYTLENELLPHMKADTYAKACFICGMVKQLLLCQMGVIPLSDRDSFENKRVELTGPLLAQLFRQYFKKMMTECALYFKKKMQSNNNDIHGNVPKENVGPKPVSVLGQIKASTIEAGLISALMNGMWAGTNNMGKKGVAQVLQRLTYLQSLGALRTITAPSSDASKKLVSPRQLHPSQVGVICPSQTPDGANVGMIKAMSMICGVSMQMTSQVPIIETVLKSKRVGMVSLHCTLPYMFSQWAKVFLNGRWMGVVEQGYAITAYMRELRQKGEIDRTVGIVYKFTEKELHIWCDGGRLYRPVFKVTYENGQGRLKLTEEMFSKVKTWNELIEKHPDCVEYMDVEEGLSMLIAMDPGSVLSVSAAHHGARSLVAHADAIEKTGGICKYTHCEFHPALMLSAVTGNIPCCQQNPSPRNAYQSAQAKQAIGINATSLLTRIDKMSFLLNFTQRPIVMTKTMDYTGFNIIPAGQNVVVAMMCYTGYNLEDSIIMNQGSIDRGVFLSTYYRRFEDKLEKDSATGQDNKFSKPRPERVSNMNTTMMNYETLNEQGYAPDETKIGRNDIIIGKIKSVIPITQKDKPYRDQSTYFKYNESAVVDKVVTGIKGSDDMDLLKMRVRSIRYPIIGDKFSSRHAQKGTIGKTLAEEDMPYTESGLRPDIILNPHCIPSRMTIGQITETMLSKLGALTGMQADGTAFEPIDMESVGKELKARGFDEQGYETMYNGMTGEPMLVKIFVGPAYYQRLKLMVEEKYHARSHSGPRQILTRQPVEGRSQNGGLRLGEMERDCLIAHGVSKMLNERMMESSDKYSVYVCKKCGTLAKKLKNMDAYVCEECKSKWDITKVNIPYAYKVFMHLLQCMNVMPRIQT* # ORIGINAL: g1183.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 18549 19175 . + . ID=g1183;Name=g1183.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 18549 19175 . + . ID=g1183.t1;Parent=g1183;Name=g1183.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 18549 19175 . + . ID=g1183.t1.exon1;Parent=g1183.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 18549 19175 . + 0 ID=cds.g1183.t1;Parent=g1183.t1 #PROT g1183.t1 g1183 MSLEDDRHMSVLDYLLKDDKMRQLTKKIGEANMSSVFATKYTKSVMFETDGEKKPKVKKDSLTYFLPKNIPDGSPDELKEFFKGHIVKGKFDAEFVEGRCGKGDISDNQLKLRTLSNRVIYLSCSDTGIQYKGSDDKSKTFILKKAQPIKAANGIAYFVDKEIESMDDGKSARIAERKTRRTKSDEGQTEAVQEEPVKRPRTARKKTE* # ORIGINAL: g1178.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 7642 8982 . - . ID=g1178;Name=g1178.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 7642 8982 . - . ID=g1178.t1;Parent=g1178;Name=g1178.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 7642 8982 . - . ID=g1178.t1.exon1;Parent=g1178.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 7642 8982 . - 0 ID=cds.g1178.t1;Parent=g1178.t1 #PROT g1178.t1 g1178 MAGGLLQLVAYGPQDLYLTGNPEITFFKILYKRYAIFSMESIEQSFTGQLDFGRKASCEIARNGDLVTKFLLNIQLPEIVENQPTWWCRKVGHAVIKTVELEIGGQKIDKHYGDWFNIWDELTRKSGHNDGYSKMIGDVPELTRRINQQGNKYVTPGYLLQIPFRFWFCRHHGLALPMIAMAFHNTKVNIEFRTLNELLVQLDPTNPDTLSHFDAVALSNPPEADFSSLKAGHDGADVDLRATQRATKYSNVNMATVSLWVDYVFLDAEDRKKLVAKPHEYLIDVVQSNAGESISNANVKPRLNFNHPVKELIWAALSDDNANKNRWHVFGSDMDADGNSIGNPMITAKLTLNGGDRFAVRDAAYFNYVQPYNHHSNTPSDGINVYSFALNPEEHQPSGTCNMSRIDNVQLIMTYQQGFRGTLQVFAVNYNVLRVVSGLAGAAFAT* # ORIGINAL: g1181.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 13746 14348 . - . ID=g1181;Name=g1181.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 13746 14348 . - . ID=g1181.t1;Parent=g1181;Name=g1181.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 13746 14348 . - . ID=g1181.t1.exon1;Parent=g1181.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 13746 14348 . - 0 ID=cds.g1181.t1;Parent=g1181.t1 #PROT g1181.t1 g1181 MAHNDYDYLFKILLIGDSGVGKSCMLLRFADDTWTDSYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKMWLQEVTRYANENVTKLLVGNKADLTNGRIVQYSTAKQCADAMGITFVETSAKTASNIEQAFITMTAEIKARVGNNAPAGTKCIMLNKSEPVQKQSSCC* # ORIGINAL: g1184.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 19540 22428 . + . ID=g1184;Name=g1184.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 19540 22428 . + . ID=g1184.t1;Parent=g1184;Name=g1184.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 19540 22428 . + . ID=g1184.t1.exon1;Parent=g1184.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 19540 22428 . + 0 ID=cds.g1184.t1;Parent=g1184.t1 #PROT g1184.t1 g1184 MTIRKDLGFVSEWVRTLAAAAGVNHELEAALLRVDQEHFLRILRTLKARAESIKSSISLDCSISRSVGGKTVRLTLPGQDSISKLAQLSQLDSAQLATYLASQPETIGGLKQKMHVEDLTAYSVRVRLSKESSLDDKTSLGKFKSADVSFRYKHRVGIVLKGLPHVRIDLTSVKSGERLDALNVITYEVEVEVLNPLAADVADFIVAVEDIVKIWQDGDEILSADEVGNVALAVKRTLGGTEKLPLRQPVSFKVEHLTKIRHYSITDKKDGDRQLLVIHGGKTYLVSPLLVVRAIEFSGINMNNLKRHDGTIIDGEHGSGSFMAFDILACQGRSLVRDVPLAMRLQELDAVLSDLGYKFGCVNFAWTKTTPPTVQDVRKHWKRQLDVYLRDYNERIESARATGGKCVLGRKLYMNPAGLGDEETFALADLMWQEMGGAGPYALDGLIFTPQLGSYQNKLQEYKWKLPELNTIDFYVEFVKQNGGVVNVAPAGEAPDLCCVVKLFVGEAQGGLEKPTPWRPHEQIFLRVGTAPALVRDAQGNLMQDKTVVEFAWTGDSRFPWMPLRTRFDKTASIRKYGTKYGNNKHVAFSIFDSINNPITPADLRLLGTDYTSTVERLTQAVQKGIAAPTALTAPTPATITATSAAPPPVYYAKETDLGLPMRRFHNFIKRTMIMRYCDRKRVLDIGVGRGGDIQKFCDANVLELIGIDVDAVGLQEAETRLAQLKKKQAPPPMTFLQMDGRLLLKPKEQEAHFAGGQSPGNIDKMKAIFGGVTPKKFGAINCQFAFHYFLESDQTFFATTVNISRLLESEGYLLITCFDDVKLESLFASSGEYSITYKGEDGKTSTLMTIRKAYNADGGNVGRMIDVLNTTISDNFVSEYVVPRNFLVSELMAKCQLQLVDEVSFESLIESHRAYFETIKPAHPRFRHLEPIRRLFSPKSSLDEACRKMSELYKLYVFRRR* # ORIGINAL: g1179.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 9589 11478 . + . ID=g1179;Name=g1179.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 9589 11478 . + . ID=g1179.t1;Parent=g1179;Name=g1179.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 9589 11478 . + . ID=g1179.t1.exon1;Parent=g1179.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 9589 11478 . + 0 ID=cds.g1179.t1;Parent=g1179.t1 #PROT g1179.t1 g1179 MNGAVVQLAHVGKEDLYLSYRPQTNLFEAEASKYTKFEMYVLRQDFGDRATWGRKCACVLTKKAHILLDATLVIKLPALPACVPTTDDPFPRAAWCEFPGVACIDKVEFEVDDVVLAAYPGEWIFIQAVQNLSASKLKQWNTMVGNDDTFLRFDQEKQSLRELHVPLTLPLLSSGGFRAEPQFNKATTKGRVFPLLSVVKDCKIRVSFKPFEKCVRFQPYKMTLAQLALESNGTWLSSPLYYRESETTVPTAVGTSTSLYTKCCQPLGVKPVWVYEMAIGAPSGSTGLVEFYFSSSIPNSITKLYTKQDDGFVLAVSLISEIQAVKRLTTEMLIHRRLLIPDLSDDNMLYAADGAPAAKVLFWGNSVLANPLDSWSTGSSAEWITDELASGLLTIIPIDLSRTSSADLYIKAGGALKLAFTTGVVSVMAPRDIQTDVSSIGPTSLQDAYIDTNVAILYNEAEKRLFMQPNRYVIEKVEVLPARRITETFVKVPLPLSLSSKELVWIFQLASATSPFDYTDGNKNPLMQEARIDIDGRQNFINRKELYFNAVQSYQSHSGSLPTGINSHSFALYPEGVQPSGFINMSTVSNVSLALQLSDAVSQTSPAELRLYNVQYTVVLAQNGKFFLP* # ORIGINAL: g1185.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 22515 23207 . + . ID=g1185;Name=g1185.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 22515 23207 . + . ID=g1185.t1;Parent=g1185;Name=g1185.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 22515 23207 . + . ID=g1185.t1.exon1;Parent=g1185.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 22515 23207 . + 0 ID=cds.g1185.t1;Parent=g1185.t1 #PROT g1185.t1 g1185 MADKIIVECVTERLRELFQSIDADGSGSITVDELCQRDLSPAKQRELLKFYGNRYYLGIFGDKKITEREFLQEHSPTLVRILMTKMCNSFLDQCMDEFQDEVRRGADQILAAENPRERRRKIEMSDEAQLVDLIAKVLEENARLQAAAGSASGSNFDVAKAVETITTKKQMSKSVNMNVATSLMSAATAATTAAATIPKVTRDQSDDLTTTGFLAVMNKYRARTAAPSRH* # ORIGINAL: g1180.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 11838 12275 . + . ID=g1180;Name=g1180.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 11838 12275 . + . ID=g1180.t1;Parent=g1180;Name=g1180.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 11838 12275 . + . ID=g1180.t1.exon1;Parent=g1180.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 11838 12275 . + 0 ID=cds.g1180.t1;Parent=g1180.t1 #PROT g1180.t1 g1180 MATINTIYEKTQKAAESLLDEKHNDANIRAVMNDWLDLLTNTPDIDIALEDSFKVFDLWTSFLELAFYGMDTDEISVSTLAAMTIEIVNRVPISDYGYLARINEILYSHGDVTRAIERRLGVPSLTPPLTCRQFITTPRCATPTA* # ORIGINAL: g1177.t1 original gene structure, not modified by PASA NODE_430_length_23877_cov_42.7118 AUGUSTUS gene 5410 6225 . - . ID=g1177;Name=g1177.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS mRNA 5410 6225 . - . ID=g1177.t1;Parent=g1177;Name=g1177.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS exon 5410 6225 . - . ID=g1177.t1.exon1;Parent=g1177.t1 NODE_430_length_23877_cov_42.7118 AUGUSTUS CDS 5410 6225 . - 0 ID=cds.g1177.t1;Parent=g1177.t1 #PROT g1177.t1 g1177 MPIAIATCVLVVILTTVYWLYGEDYNEEAANDEQTENYVEKFEDSPSPTDVKSSDDSVPAPVSTTNPIPVPATKVPQATKQPQNRRRVARISRLKTTTTVQPAADPQPLADDAPMCSATCTKNIISNVAQIVRKELNKQLGQKTVSFQGDVAAPLDGAADFVYAPDDVVDRVTQEFYDKRGGNNDPNWKDPRPKDIKMKPAYAGYSYTPPSTWNIPHKRPPQCMRTVACEPCPMLSDPRYADYMDISNQQQIVDENIKNSVDQDFYAKLGS* # ORIGINAL: g3012.t1 original gene structure, not modified by PASA NODE_8190_length_383_cov_43.8701_potentialcontaminant AUGUSTUS gene 2 208 . + . ID=g3012;Name=g3012.t1 NODE_8190_length_383_cov_43.8701_potentialcontaminant AUGUSTUS mRNA 2 208 . + . ID=g3012.t1;Parent=g3012;Name=g3012.t1 NODE_8190_length_383_cov_43.8701_potentialcontaminant AUGUSTUS exon 2 208 . + . ID=g3012.t1.exon1;Parent=g3012.t1 NODE_8190_length_383_cov_43.8701_potentialcontaminant AUGUSTUS CDS 2 208 . + 0 ID=cds.g3012.t1;Parent=g3012.t1 #PROT g3012.t1 g3012 HKDSSSPVIPPLDAYIRKLQEKGITLIVGDPNARHPLWCPSALSANKVTKAGQANICRYKRRDTNNGP* # ORIGINAL: g4330.t1 original gene structure, not modified by PASA NODE_1941_length_8436_cov_51.0067 AUGUSTUS gene 5991 6854 . - . ID=g4330;Name=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS mRNA 5991 6854 . - . ID=g4330.t1;Parent=g4330;Name=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 6753 6854 . - . ID=g4330.t1.exon1;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 6753 6854 . - 0 ID=cds.g4330.t1;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 6568 6667 . - . ID=g4330.t1.exon2;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 6568 6667 . - 0 ID=cds.g4330.t1;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 6373 6419 . - . ID=g4330.t1.exon3;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 6373 6419 . - 2 ID=cds.g4330.t1;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 6195 6297 . - . ID=g4330.t1.exon4;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 6195 6297 . - 0 ID=cds.g4330.t1;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 5991 6055 . - . ID=g4330.t1.exon5;Parent=g4330.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 5991 6055 . - 2 ID=cds.g4330.t1;Parent=g4330.t1 #PROT g4330.t1 g4330 MRAKRRQTCVRCRADPVKEARCDGRTPCAVCLLNGNASDCRVRVDRGASGRFKRHLLVAELKAACAQEAALTPSGEQGSRITEELVRCIDGVGASTAVSDGDPLAEFPIRNSGIIALAVILHEHLAEAMRPFCGSSGT* # PASA_UPDATE: g4328.t1, single gene model update, valid-1, status:[pasa:asmbl_3071,status:12], valid-1 NODE_1941_length_8436_cov_51.0067 . gene 297 4630 . - . ID=g4328;Name=g4328.t1 NODE_1941_length_8436_cov_51.0067 . mRNA 297 4630 . - . ID=g4328.t1;Parent=g4328;Name=g4328.t1 NODE_1941_length_8436_cov_51.0067 . five_prime_UTR 4441 4630 . - . ID=g4328.t1.utr5p1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 4246 4630 . - . ID=g4328.t1.exon1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 4246 4440 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 3909 4099 . - . ID=g4328.t1.exon2;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 3909 4099 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 3311 3791 . - . ID=g4328.t1.exon3;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 3311 3791 . - 1 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 2833 3093 . - . ID=g4328.t1.exon4;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 2833 3093 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 2551 2642 . - . ID=g4328.t1.exon5;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 2551 2642 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 2272 2408 . - . ID=g4328.t1.exon6;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 2272 2408 . - 1 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 1755 2092 . - . ID=g4328.t1.exon7;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 1755 2092 . - 2 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 1521 1610 . - . ID=g4328.t1.exon8;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 1521 1610 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 1160 1280 . - . ID=g4328.t1.exon9;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 1160 1280 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 818 939 . - . ID=g4328.t1.exon10;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 818 939 . - 2 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 532 624 . - . ID=g4328.t1.exon11;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 532 624 . - 0 ID=cds.g4328.t1;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . exon 297 384 . - . ID=g4328.t1.exon12;Parent=g4328.t1 NODE_1941_length_8436_cov_51.0067 . CDS 297 384 . - 0 ID=cds.g4328.t1;Parent=g4328.t1;3_prime_partial=true #PROT g4328.t1 g4328 MATYASAVSSSSTGGAIAGVSGGGAGRNRIDVLREWDASAPLTDGQKESVFELAAQADERPLPQWTASATAEGPQIPSTEPPVKAAADVTASLVAPMAVGSRVETAQQFFAWFSDIEVQMEGEQERSYRSYASLLEQYRTHTDDILAEIDNGLLRLDALLTDHDAVSTKTGALHGACETLLAEQTRLVAVGEGIAQRLAYFNELEKASARLASASTVAVASESVVPLIARLDECVAYTAANRQFKEAEVYLAKFTQCLGRALTLVKMNVVQTLKSGTQSCLEQMSAHQKGAVTSSGAPATEVLFALLYGKFRAHAPRVKAVIGELEARGGRSPEYQSLLQDCYACYFDQRRILLEKPIADTLGGLSAANEGNIALMLRSGCAYMQRVCESEHQLYQHFFAVVSPGLDALLESLALNLYDTLRPLIIHIAGMETISELIDVLKAEVLDDRASKGAESRAFDAVALQLLEDLQARLVYRTESYIESDIRRFKPDADHLAYPEKLIPGASGAGSAGADGSRDALAVLRPEHNGAGGGDTPEGVHLYETWYPTLQRTLMTLSRLHRCVDRHVFEVLSHDLVSTCMGTLVDASAMISARKGSIDGQLFLIKHLLILREHIAPFGTNFAIREKNLDFNRLKDAAFGLLHKGNKLFALNGSNALIEFLLEAPQVTENYTDAKKDVDVQLKTVCERFIADVSKSMISPLTSFLAKASAFARVKAASKPSDASPPSIKLQPFAHP # ORIGINAL: g4329.t1 original gene structure, not modified by PASA NODE_1941_length_8436_cov_51.0067 AUGUSTUS gene 4971 5725 . + . ID=g4329;Name=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS mRNA 4971 5725 . + . ID=g4329.t1;Parent=g4329;Name=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 4971 5092 . + . ID=g4329.t1.exon1;Parent=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 4971 5092 . + 0 ID=cds.g4329.t1;Parent=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 5258 5361 . + . ID=g4329.t1.exon2;Parent=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 5258 5361 . + 1 ID=cds.g4329.t1;Parent=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 5514 5725 . + . ID=g4329.t1.exon3;Parent=g4329.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 5514 5725 . + 2 ID=cds.g4329.t1;Parent=g4329.t1 #PROT g4329.t1 g4329 MTVYSVYIINKAGSLIFQQDYGNIPRLPANERIMLASMFHGLYAITSKLSPEVHSSGIEVLEADTFKIHCFQTLTGTKFLTISDPAQSGTDAILKRLYEMYADYVLKNPFYTLENPIRCELFDTNLAKFIEQLEGGYRPYQTQVA* # ORIGINAL: g4331.t1 original gene structure, not modified by PASA NODE_1941_length_8436_cov_51.0067 AUGUSTUS gene 7227 7875 . + . ID=g4331;Name=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS mRNA 7227 7875 . + . ID=g4331.t1;Parent=g4331;Name=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 7227 7345 . + . ID=g4331.t1.exon1;Parent=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 7227 7345 . + 0 ID=cds.g4331.t1;Parent=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 7505 7638 . + . ID=g4331.t1.exon2;Parent=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 7505 7638 . + 1 ID=cds.g4331.t1;Parent=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS exon 7802 7875 . + . ID=g4331.t1.exon3;Parent=g4331.t1 NODE_1941_length_8436_cov_51.0067 AUGUSTUS CDS 7802 7875 . + 2 ID=cds.g4331.t1;Parent=g4331.t1 #PROT g4331.t1 g4331 MPTVAIEAGPSSPKPEDGQPPQSPSQQGNVYTIRPNYKHKFRPPAVKEVIRQVLNDRLTDKTYKVEEVAEWTRDIADEIKRRLKEMGLERYKFVVQVVIGEQRGQGVK* # ORIGINAL: g8410.t1 original gene structure, not modified by PASA NODE_2252_length_7071_cov_43.5217 AUGUSTUS gene 6326 6682 . - . ID=g8410;Name=g8410.t1 NODE_2252_length_7071_cov_43.5217 AUGUSTUS mRNA 6326 6682 . - . ID=g8410.t1;Parent=g8410;Name=g8410.t1 NODE_2252_length_7071_cov_43.5217 AUGUSTUS exon 6326 6682 . - . ID=g8410.t1.exon1;Parent=g8410.t1 NODE_2252_length_7071_cov_43.5217 AUGUSTUS CDS 6326 6682 . - 0 ID=cds.g8410.t1;Parent=g8410.t1 #PROT g8410.t1 g8410 MLCAVAFGVAVEPHPLRFPCLDDVGLVIQREREYCPVGLGPLALPRHRCIHVRNVPSTPHGVRLGAVLQFPCGEDRSERRAYRPPGGGKAPVDVRPLGAICQTPPGFRLVTILHLLPD* # PASA_UPDATE: g7502.t1, single gene model update, valid-1, status:[pasa:asmbl_4676,status:12], valid-1 NODE_2623_length_5615_cov_60.0016 . gene 1 1125 . - . ID=g7502;Name=g7502.t1 NODE_2623_length_5615_cov_60.0016 . mRNA 1 1125 . - . ID=g7502.t1;Parent=g7502;Name=g7502.t1 NODE_2623_length_5615_cov_60.0016 . five_prime_UTR 1002 1125 . - . ID=g7502.t1.utr5p1;Parent=g7502.t1 NODE_2623_length_5615_cov_60.0016 . exon 579 1125 . - . ID=g7502.t1.exon1;Parent=g7502.t1 NODE_2623_length_5615_cov_60.0016 . CDS 579 1001 . - 0 ID=cds.g7502.t1;Parent=g7502.t1 NODE_2623_length_5615_cov_60.0016 . exon 1 132 . - . ID=g7502.t1.exon2;Parent=g7502.t1 NODE_2623_length_5615_cov_60.0016 . CDS 1 132 . - 0 ID=cds.g7502.t1;Parent=g7502.t1;3_prime_partial=true #PROT g7502.t1 g7502 MMQQNFVNPNASYSVVQPGMAPMQMQPMQYGMQQPMMQMQQQPMMQMQQQPMMQMQQPMMQMQQPMMQMQPAGPMTIQQAVPAGNTFGGGIQQFGFANGGGLDQQQDGVSNAVNFKDVFMNKEVGVVAADIIARLDGFADQFHAKLEEKDKLYENIYRSLPSAQTTIVKTIKAIDVNTQTRVALK # PASA_UPDATE: g7503.t1, single gene model update, valid-1, status:[pasa:asmbl_4675,status:12], valid-1 NODE_2623_length_5615_cov_60.0016 . gene 2890 3994 . - . ID=g7503;Name=g7503.t1 NODE_2623_length_5615_cov_60.0016 . mRNA 2890 3994 . - . ID=g7503.t1;Parent=g7503;Name=g7503.t1 NODE_2623_length_5615_cov_60.0016 . exon 3632 3994 . - . ID=g7503.t1.exon1;Parent=g7503.t1 NODE_2623_length_5615_cov_60.0016 . CDS 3632 3994 . - 0 ID=cds.g7503.t1;Parent=g7503.t1 NODE_2623_length_5615_cov_60.0016 . exon 2890 3255 . - . ID=g7503.t1.exon2;Parent=g7503.t1 NODE_2623_length_5615_cov_60.0016 . CDS 2890 3255 . - 0 ID=cds.g7503.t1;Parent=g7503.t1 #PROT g7503.t1 g7503 MAPMQMQPMQYGMQPMMQMQQQPMMQMQQQPMMQMQQPMMQMQQPMMQMQPAGPMTIQQAVPAGNTFGGGIQQFGFANGGGLDQQQDGVTNAVNFKDVFMNKEVGVVAADITARLDGFADQFHAKLEEKDKLYENIYRSLPSAQTTVVKTIKAIDVSTKTRVALKLDIAIKSSAQPTTTEDKYMQTAQKSCCCGCTCCACCVTPAVYGTRVMLVKTEIQAVLAKINEGAKVNDNDAANERAI* # PASA_UPDATE: g12558.t1, single gene model update, valid-1, status:[pasa:asmbl_9315,status:3], valid-1 NODE_774_length_17868_cov_48.3204 . gene 1518 4689 . + . ID=g12558;Name=g12558.t1 NODE_774_length_17868_cov_48.3204 . mRNA 1518 4689 . + . ID=g12558.t1;Parent=g12558;Name=g12558.t1 NODE_774_length_17868_cov_48.3204 . five_prime_UTR 1518 2645 . + . ID=g12558.t1.utr5p1;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . five_prime_UTR 2928 3040 . + . ID=g12558.t1.utr5p2;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . exon 1518 2645 . + . ID=g12558.t1.exon1;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . exon 2928 3474 . + . ID=g12558.t1.exon2;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . CDS 3041 3474 . + 0 ID=cds.g12558.t1;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . exon 3679 4689 . + . ID=g12558.t1.exon3;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . CDS 3679 4567 . + 1 ID=cds.g12558.t1;Parent=g12558.t1 NODE_774_length_17868_cov_48.3204 . three_prime_UTR 4568 4689 . + . ID=g12558.t1.utr3p1;Parent=g12558.t1 #PROT g12558.t1 g12558 MAAVVGIASGHAAVSRDSHPHTNDASCVTKMDTSEATATEGDPIADLIALAAELNAHAEASAAHETLSKAPGADTLRVLEGMGIPPSKLDEWEQMLVQFNRDTVAIMRKYSDRIHFVVDSLREEQMADTLAVESNASADKAGAASIVFKEESDADFKVIVRDGVSRHASRQSSNDSSNNSTSANNNSNNNDISSFDSDSDGVLLASLSCADVSYAECHTELARALSAAGTASDSAYGSGGPSEGALTSVTASSLASVCADIDSCFSSPLASPGMPMGDVRDVADFGAFASADDDFAFAFQHTTTDNRNARKASVATAPLKKRRTAKRPLSTPAADAVSARDSLNKPAAAQSGKVRAGVLHLRKRGASSALPYVSCGRRSQAVSAPNATNTGTSVAECPAFSETTHPSVLNAYALNTTSLTHAFPAISDNYLEYIAMRYAD* # PASA_UPDATE: g12562.t1, single gene model update, valid-1, status:[pasa:asmbl_9317,status:12], valid-1 NODE_774_length_17868_cov_48.3204 . gene 15659 17113 . + . ID=g12562;Name=g12562.t1 NODE_774_length_17868_cov_48.3204 . mRNA 15659 17113 . + . ID=g12562.t1;Parent=g12562;Name=g12562.t1 NODE_774_length_17868_cov_48.3204 . five_prime_UTR 15659 15699 . + . ID=g12562.t1.utr5p1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . exon 15659 15798 . + . ID=g12562.t1.exon1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . CDS 15700 15798 . + 0 ID=cds.g12562.t1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . exon 16056 16098 . + . ID=g12562.t1.exon2;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . CDS 16056 16098 . + 0 ID=cds.g12562.t1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . exon 16297 16353 . + . ID=g12562.t1.exon3;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . CDS 16297 16353 . + 2 ID=cds.g12562.t1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . exon 16467 16590 . + . ID=g12562.t1.exon4;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . CDS 16467 16590 . + 2 ID=cds.g12562.t1;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . exon 16993 17113 . + . ID=g12562.t1.exon5;Parent=g12562.t1 NODE_774_length_17868_cov_48.3204 . CDS 16993 17113 . + 1 ID=cds.g12562.t1;Parent=g12562.t1 #PROT g12562.t1 g12562 MAEFRTEYAKSGRASCSTCKNAIAQGSLRMAKMEQSPFFDGMIPRWSHFACFFKKPKSIRTTSQIEGFNDVRWDDQEKIRNALGLGESSAAGASGSAMAVDPPPAMSSAVEKHDYKSEYAKSGRSSCTLCSSAIPQGTLRLAKMVCA* # ORIGINAL: g12559.t1 original gene structure, not modified by PASA NODE_774_length_17868_cov_48.3204 AUGUSTUS gene 5299 6465 . + . ID=g12559;Name=g12559.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS mRNA 5299 6465 . + . ID=g12559.t1;Parent=g12559;Name=g12559.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS exon 5299 6465 . + . ID=g12559.t1.exon1;Parent=g12559.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS CDS 5299 6465 . + 0 ID=cds.g12559.t1;Parent=g12559.t1 #PROT g12559.t1 g12559 MGVSLASVMHLNSLGGSSSRRAVVCVAVSVASMVLVAALVIASSRTTIAPFSDSFTSTPVYPSAHQVVYDGDPTQTMDAWSAPLNPEDARFVAELADTNSRVLIVVIHFNRYDLISLQLCSLRASFPDPFDYVVINDAIDSKTHIAIHQECLRLGVRCISTPLQRGPPMNPSIEVGRTLDWMLAHVGHPSRRLVFSMQPDYVFVKRFSLREFMGDHLIAGGWDRRVGSDGRSVDYIIDGIFAYDAGRLPNKTSLSFACDPPPQDGCFFDGIRGDTGVKTAGYFRSHPNISFQSIPYLRVLTLERLRNTNESLPLLWTLYENDVKLFGPTGLQQSYFEIYGEHNEILHLHTASGWNKALGRLHELRWASFLPLLNEHWHCSNSTEGGRL* # ORIGINAL: g12560.t1 original gene structure, not modified by PASA NODE_774_length_17868_cov_48.3204 AUGUSTUS gene 8748 10337 . + . ID=g12560;Name=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS mRNA 8748 10337 . + . ID=g12560.t1;Parent=g12560;Name=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS exon 8748 9406 . + . ID=g12560.t1.exon1;Parent=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS CDS 8748 9406 . + 0 ID=cds.g12560.t1;Parent=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS exon 9601 9910 . + . ID=g12560.t1.exon2;Parent=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS CDS 9601 9910 . + 1 ID=cds.g12560.t1;Parent=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS exon 10176 10337 . + . ID=g12560.t1.exon3;Parent=g12560.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS CDS 10176 10337 . + 0 ID=cds.g12560.t1;Parent=g12560.t1 #PROT g12560.t1 g12560 MRGKVLVVVGTRPEAIKLVSVIHSLSMSASFEPFVCATGQHKEMVLQVFDRFGISIDKWLEMPSFTSQRESHPDRKLSALSAGVLEAMTDMLLEVRPAIVVVQGDTTSAAMGAVAAFYQKIPVAHVEAGLRTFDMTNPFPEEFNRKLIGCFARWHFAPSSTARQNLLNEGVAEESIYSTGNTVVDALHMTLERCGETVAANAGASSSSGSGRRVVITAHRRENWGEPLRRICRSVKTLSDEHDDVKFVFYVHPNPAVRAIVWEELGKSRCQLEDPLPYDRFVVSLSRACLVITDSGGIQEETAVMNIPTLITREETERPEGLQNNIHSLVGTDVDVIVAKAREQLERKRPVAVCGVSEYGEGKAGEEIVRILERSL* # ORIGINAL: g12557.t1 original gene structure, not modified by PASA NODE_774_length_17868_cov_48.3204 AUGUSTUS gene 245 766 . + . ID=g12557;Name=g12557.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS mRNA 245 766 . + . ID=g12557.t1;Parent=g12557;Name=g12557.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS exon 245 766 . + . ID=g12557.t1.exon1;Parent=g12557.t1 NODE_774_length_17868_cov_48.3204 AUGUSTUS CDS 245 766 . + 0 ID=cds.g12557.t1;Parent=g12557.t1 #PROT g12557.t1 g12557 MIAAGWTSGLVRDGDFRSSHFVWFEDAEGTPIPHESFSSEHVGHCDSASPAAGTAHAPAQSSGGLWAAYNPFHGAPSRDSTGSIAPITSLGVRGGKRFSPRDIMRCAFPGHPSGRMGSGSFGAGGSSGSTGGAGSVQGYELYVVHLSIVPASMVRHQCERLAVRLKERRRTAS* # PASA_UPDATE: g12561.t1, single gene model update, valid-1, status:[pasa:asmbl_9316,status:3], valid-1 NODE_774_length_17868_cov_48.3204 . gene 11237 14587 . + . ID=g12561;Name=g12561.t1 NODE_774_length_17868_cov_48.3204 . mRNA 11237 14587 . + . ID=g12561.t1;Parent=g12561;Name=g12561.t1 NODE_774_length_17868_cov_48.3204 . five_prime_UTR 11237 11257 . + . ID=g12561.t1.utr5p1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . five_prime_UTR 11364 11428 . + . ID=g12561.t1.utr5p2;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 11237 11257 . + . ID=g12561.t1.exon1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 11364 11609 . + . ID=g12561.t1.exon2;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 11429 11609 . + 0 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 12028 12101 . + . ID=g12561.t1.exon3;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 12028 12101 . + 2 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 12308 12364 . + . ID=g12561.t1.exon4;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 12308 12364 . + 0 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 12685 12756 . + . ID=g12561.t1.exon5;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 12685 12756 . + 0 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 13695 13828 . + . ID=g12561.t1.exon6;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 13695 13828 . + 0 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . exon 14311 14587 . + . ID=g12561.t1.exon7;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . CDS 14311 14380 . + 1 ID=cds.g12561.t1;Parent=g12561.t1 NODE_774_length_17868_cov_48.3204 . three_prime_UTR 14381 14587 . + . ID=g12561.t1.utr3p1;Parent=g12561.t1 #PROT g12561.t1 g12561 MASPLRTVVFYGSVRPGRLGIRAAKFIAAQLTARNHHVFLADAQELNLPLFQQFASKYAKGEHKGVDALLPEVANADAYIVVSGEYNHSIPPALSNMLDHFMPEYRFKPFGLVTYSAGPWGGVRTVSQLRSLLGEVGGVTCSTTFPIPVVMNQFNEAGEDVTPDKGNVARSKRLIDELEFYAHGLKQARAGGVPF* # PASA_UPDATE: g166.t1, single gene model update, valid-1, status:[pasa:asmbl_3574,status:12],[pasa:asmbl_3575,status:12], valid-1 NODE_2123_length_7625_cov_39.2245 . gene 4756 6422 . + . ID=g166;Name=g166.t1 NODE_2123_length_7625_cov_39.2245 . mRNA 4756 6422 . + . ID=g166.t1;Parent=g166;Name=g166.t1 NODE_2123_length_7625_cov_39.2245 . exon 4756 4918 . + . ID=g166.t1.exon1;Parent=g166.t1 NODE_2123_length_7625_cov_39.2245 . CDS 4756 4918 . + 0 ID=cds.g166.t1;Parent=g166.t1 NODE_2123_length_7625_cov_39.2245 . exon 5076 6422 . + . ID=g166.t1.exon2;Parent=g166.t1 NODE_2123_length_7625_cov_39.2245 . CDS 5076 6244 . + 2 ID=cds.g166.t1;Parent=g166.t1 NODE_2123_length_7625_cov_39.2245 . three_prime_UTR 6245 6422 . + . ID=g166.t1.utr3p1;Parent=g166.t1 #PROT g166.t1 g166 MSRRRSSVCSASMEPAPPSVNASRRSTCGQSGIGIGVQSEGSALGLAYLSVRESGAVVEISDAAVRLCGYDNATEIVGQHVSLLWPALKGAASISRRVLEGTDGFQWTRKKDGSRICTCIAESYEFGSASSSPATSDAPTSSQSAVGVDDLVQDARPSSSESVSSQGRILPHGESVITIVLVDGTELERVRSSNPFVDANFAILQISKWGKIELVPPCSGGLLGMRPHSLVGRSIMEFIPEEDLSYFCRQMDSIFHSGFGTLHLTMIRKTSLVSQSTPVGGVDVASDDQSSASTGGCDSPRNELVEVELWARVKDDTIICLVSEGPCRDTFLSRGMRDYEDVQMQLQRMAVTVWQTAHASRLFRVLEFIKSLLVRTAVRGLSAVFAVAEGTYALASSATPHSLLMHVPMVKQIAYYLPHYSLASPAPLLITAAETLAIDSRGE* # ORIGINAL: g165.t1 original gene structure, not modified by PASA NODE_2123_length_7625_cov_39.2245 AUGUSTUS gene 1181 3791 . - . ID=g165;Name=g165.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS mRNA 1181 3791 . - . ID=g165.t1;Parent=g165;Name=g165.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS exon 2717 3791 . - . ID=g165.t1.exon1;Parent=g165.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS CDS 2717 3791 . - 0 ID=cds.g165.t1;Parent=g165.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS exon 1181 2427 . - . ID=g165.t1.exon2;Parent=g165.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS CDS 1181 2427 . - 2 ID=cds.g165.t1;Parent=g165.t1 #PROT g165.t1 g165 MLRWRRPSLPLSWTRQRSLNCTLHDAGLITADTSLLSHDYWDLGQQDAHETDVATLHGTPPPTCDAAVRADSSDLSMSRSIVRALTNSDSNSANAISGSSWWRRFGAWDELRTLSSDRRAYALGHDDWLLRRVIADSDGVRYLTDNIDVVLSKRHVSGLQRDSQTFVRTLASSLSTSEWAVLAARILMSESCGGVDMTLAMLECPEHILTRIAMTTENGGCDASAMFANLSESVFATTNDALRVYALIGRACLHAAGRDQSPGQLLNTGDVSGECNGEDNVVVRTVNPTIDNEGHMAHGAVGGSRPGEVTVTSDSSRDSTFRALASTLADGHYFASATQGSNPASLRLTSALVSLRDHGIELVSIESPSEQDGYHAITLSVPSGDTLVVASCPRHTSHARDIAHVICIRPRMMRTGDAPSTSASASSGYHRIGGGTVAATYSQEHLPREKAVIRLWGGTTAVSVVTVDTPRRPEGGLVWLGGHACSRGNAEEREGYGGARYEVVTEASVTLCIGRVAGVWDVVRDGFTCIGGHDHSPAACAKVGTNVAAFVDIGCGGCAVALFDAGMPPVEWMQAVGIEGEYMVQSAEGLFTWSPSGQLLSHAPPAGAHVGRQRDATALRRALLSCGFVECKMGMYVHLLVTTTSHDDDSGTARLPGHGVFLLRDNQLRMGRFVALPCDVRAIRVDFVSDIRGDPSASHSGRGGDVTTTTTRDVASREYKSAQTVLVIEGEVASLQCPRGGPTVPPVVVTRLRMTLRLGFSSGRVELSARVDD* # ORIGINAL: g164.t1 original gene structure, not modified by PASA NODE_2123_length_7625_cov_39.2245 AUGUSTUS gene 147 344 . + . ID=g164;Name=g164.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS mRNA 147 344 . + . ID=g164.t1;Parent=g164;Name=g164.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS exon 147 344 . + . ID=g164.t1.exon1;Parent=g164.t1 NODE_2123_length_7625_cov_39.2245 AUGUSTUS CDS 147 344 . + 0 ID=cds.g164.t1;Parent=g164.t1 #PROT g164.t1 g164 ANLIDRITAANNAAKTNGGAAAPDHAISTPATAITTAQPTATPTQAAASDVTIALETSVTAQPTD* # PASA_UPDATE: g167.t1, single gene model update, valid-1, status:[pasa:asmbl_3573,status:12], valid-1 NODE_2123_length_7625_cov_39.2245 . gene 7033 7504 . + . ID=g167;Name=g167.t1 NODE_2123_length_7625_cov_39.2245 . mRNA 7033 7504 . + . ID=g167.t1;Parent=g167;Name=g167.t1 NODE_2123_length_7625_cov_39.2245 . five_prime_UTR 7033 7036 . + . ID=g167.t1.utr5p1;Parent=g167.t1 NODE_2123_length_7625_cov_39.2245 . exon 7033 7216 . + . ID=g167.t1.exon1;Parent=g167.t1 NODE_2123_length_7625_cov_39.2245 . CDS 7037 7216 . + 0 ID=cds.g167.t1;Parent=g167.t1 NODE_2123_length_7625_cov_39.2245 . exon 7412 7504 . + . ID=g167.t1.exon2;Parent=g167.t1 NODE_2123_length_7625_cov_39.2245 . CDS 7412 7504 . + 0 ID=cds.g167.t1;Parent=g167.t1;3_prime_partial=true #PROT g167.t1 g167 MSVLISSKRALTHTTMRSFIIVAALLSVAAAAWAMPAATEAVLNTTPVSGLCDTVKQEAGYLSLTKTSKNYFYWFFESRNDASKDPVILWM # PASA_UPDATE: g93.t1, single gene model update, valid-1, status:[pasa:asmbl_5378,status:3], valid-1 NODE_29_length_59830_cov_43.247 . gene 31126 32324 . - . ID=g93;Name=g93.t1 NODE_29_length_59830_cov_43.247 . mRNA 31126 32324 . - . ID=g93.t1;Parent=g93;Name=g93.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 32104 32324 . - . ID=g93.t1.utr5p1;Parent=g93.t1 NODE_29_length_59830_cov_43.247 . exon 31575 32324 . - . ID=g93.t1.exon1;Parent=g93.t1 NODE_29_length_59830_cov_43.247 . CDS 31575 32103 . - 0 ID=cds.g93.t1;Parent=g93.t1 NODE_29_length_59830_cov_43.247 . exon 31126 31405 . - . ID=g93.t1.exon2;Parent=g93.t1 NODE_29_length_59830_cov_43.247 . CDS 31248 31405 . - 2 ID=cds.g93.t1;Parent=g93.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 31126 31247 . - . ID=g93.t1.utr3p1;Parent=g93.t1 #PROT g93.t1 g93 MVNCTRAPRSRSASMGSQRPHKPIAIAPSCDPMAIPDGAVAFKTEPLDSLFDDSMGMGMGMGHEGDFFDGLLATFDHDPLDSSSASDPESPAHYGSLAPMSQSLPATFSTWDARSLMLPESLVPGSLPAAGGWDLKTDAKPFPTGAPPRRQRRRDSHNAVERRRRDNINDRIIELGGLVPESFGEKNLYNSKGETLRKAAQYIRHLMAANAQLHEAVVQEERRQKDGR* # ORIGINAL: g90.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 24060 25709 . + . ID=g90;Name=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 24060 25709 . + . ID=g90.t1;Parent=g90;Name=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 24060 24133 . + . ID=g90.t1.exon1;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 24060 24133 . + 0 ID=cds.g90.t1;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 24268 24472 . + . ID=g90.t1.exon2;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 24268 24472 . + 1 ID=cds.g90.t1;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 24698 24896 . + . ID=g90.t1.exon3;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 24698 24896 . + 0 ID=cds.g90.t1;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 25276 25709 . + . ID=g90.t1.exon4;Parent=g90.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 25276 25709 . + 2 ID=cds.g90.t1;Parent=g90.t1 #PROT g90.t1 g90 MGCDAPPSAQMVTQADRCSLAELYTEVYKCCCFGLTRRLLDDFFGACSKHFCAVADVLQAASVDPPSFVALFTSHVVSMAALADHLPQIFQYLDRDFMVPKRATTVADAFRAQFDACVMARGGNGETLFAILRASAVGVVNIDMQTTTACVQGLYRIDKSYASYAPTLFARIIPASVDGSRSQTTAHVTHGTPPAAAAVPLRDVIKARMRASALAHGNRKRRPSSPDVPNERAGPRSRMDENDTNSNDNDYDYEYSAVLIGGAHLHSGAHGDNGEDPVDASAEVAEFVDAHAVLGGGEAMDET* # ORIGINAL: g101.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 51639 52585 . - . ID=g101;Name=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 51639 52585 . - . ID=g101.t1;Parent=g101;Name=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 52513 52585 . - . ID=g101.t1.exon1;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 52513 52585 . - 0 ID=cds.g101.t1;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 52219 52254 . - . ID=g101.t1.exon2;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 52219 52254 . - 2 ID=cds.g101.t1;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 51959 51997 . - . ID=g101.t1.exon3;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 51959 51997 . - 2 ID=cds.g101.t1;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 51639 51727 . - . ID=g101.t1.exon4;Parent=g101.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 51639 51727 . - 2 ID=cds.g101.t1;Parent=g101.t1 #PROT g101.t1 g101 MTGVALPLDTQSRVYVGSFGRNPAEFYQRSTSTPHLGGKVVMRHVSSLGAYTLFCIAARVREGLWVPPGSSLASHSRE* # ORIGINAL: g95.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 34162 37234 . + . ID=g95;Name=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 34162 37234 . + . ID=g95.t1;Parent=g95;Name=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 34162 34737 . + . ID=g95.t1.exon1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 34162 34737 . + 0 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 34844 35020 . + . ID=g95.t1.exon2;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 34844 35020 . + 0 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 35150 35319 . + . ID=g95.t1.exon3;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 35150 35319 . + 0 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 35510 35672 . + . ID=g95.t1.exon4;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 35510 35672 . + 1 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 35917 36065 . + . ID=g95.t1.exon5;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 35917 36065 . + 0 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 36221 36620 . + . ID=g95.t1.exon6;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 36221 36620 . + 1 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 36842 36961 . + . ID=g95.t1.exon7;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 36842 36961 . + 0 ID=cds.g95.t1;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 37094 37234 . + . ID=g95.t1.exon8;Parent=g95.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 37094 37234 . + 0 ID=cds.g95.t1;Parent=g95.t1 #PROT g95.t1 g95 MASQSRFASTFTLPIDPIAVDADMPATAPANMTASMADLGLGGPSLEDTLPELTNSMRRVSLPPLTISPDPEDEPVSEAIPRRLSRINRRRQSYIDLAEKAADLLQFQQPSRSSLSDGRALSLSLLPTDADWDSSDEEDPLPVRHDRPLVNYRSNSKRAPIERFRNAVKTVLGNLKLIKSLPENKFDGIADNWVEVLRRAVKHVIILNKAGMKVKKVLQNGRERVTRDSEGLAEDNKANTMVFNLNAFMAQFQLEVSPEAKKIMVRMPSERSERDLKKLHKLVSGLKCFEKYSKTVRHELCRVIRYERHETGRMVIRQGDPGRSFYFILSGSVRVNVKETDPLTGRSFTKQVDELHKGDSFGELALLKNITRQATILCKEATEFLSMDKEDFQGILRQSHSQELEEKINFLRSTELMASWPDDLVRTVSDTSQVKDFKAKMVLLRTQQPSDWIFLVRRGRCEAIKAIETRMSHKSLPPMRHSDHVSTGKGKDAAGATATAGDDSSADELSPSKIVPQHGQTIRCPRKKTIKVFLRVKTFAPGDFFADNTVVNYGKDVSFVSSERIECVLISKVAFYRRAMQKSLEIIKRHALEVPSDEEVLRSYQQQRDWALYKRQVISSVLARAAQHQFR* # ORIGINAL: g92.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 28861 30955 . + . ID=g92;Name=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 28861 30955 . + . ID=g92.t1;Parent=g92;Name=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 28861 29028 . + . ID=g92.t1.exon1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 28861 29028 . + 0 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 29129 29205 . + . ID=g92.t1.exon2;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 29129 29205 . + 0 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 29290 29404 . + . ID=g92.t1.exon3;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 29290 29404 . + 1 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 29512 29554 . + . ID=g92.t1.exon4;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 29512 29554 . + 0 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 29675 29760 . + . ID=g92.t1.exon5;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 29675 29760 . + 2 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 29933 30389 . + . ID=g92.t1.exon6;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 29933 30389 . + 0 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 30494 30672 . + . ID=g92.t1.exon7;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 30494 30672 . + 2 ID=cds.g92.t1;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 30791 30955 . + . ID=g92.t1.exon8;Parent=g92.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 30791 30955 . + 0 ID=cds.g92.t1;Parent=g92.t1 #PROT g92.t1 g92 MSAPVTPSNGATHPTHCHFNGETHLKTSFPKNKIKILLLENINTLAINILLKEGFVVDAVKGALSEDELKERIKGVHAIGIRSKTQITEAVLKNADRLLAIGCFCIGTDQVDLAAAERHGIPVFNSPFMNSRSVAELMIAEIILLSRQLGDRNKEMHSGEWNKVSANCHEVRGKTLGIVGYGHIGSQLSVLAESLGMKVVFHDVVNVMPLGNSRQEASLGDLLAVADFVSLHVPDTPETVGMIGAEQIARMRKGSYLINASRGKVVVIEALRDALKAGHLAGAAVDVYPTEPRNNCKDWTSPLIGCPNTLLTPHIGGSTEEAQEKIGEEVAHKLVKLINIGSTHGAVNFPNVEIPFVKDSHRILNTHKNVPGVLKQINGILGDYNIVRQWLDTTQNIGYLVMDVERNASKDIKDSISKVEASIRTRILY* # PASA_UPDATE: g83.t1, single gene model update, valid-1, status:[pasa:asmbl_5369,status:12],[pasa:asmbl_5374,status:12], valid-1 NODE_29_length_59830_cov_43.247 . gene 113 3502 . + . ID=g83;Name=g83.t1 NODE_29_length_59830_cov_43.247 . mRNA 113 3502 . + . ID=g83.t1;Parent=g83;Name=g83.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 113 113 . + . ID=g83.t1.utr5p1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 113 432 . + . ID=g83.t1.exon1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 114 432 . + 0 ID=cds.g83.t1;Parent=g83.t1;5_prime_partial=true NODE_29_length_59830_cov_43.247 . exon 818 883 . + . ID=g83.t1.exon2;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 818 883 . + 2 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 1054 1156 . + . ID=g83.t1.exon3;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 1054 1156 . + 2 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 1381 1593 . + . ID=g83.t1.exon4;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 1381 1593 . + 1 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 1959 2007 . + . ID=g83.t1.exon5;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 1959 2007 . + 1 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 2167 2277 . + . ID=g83.t1.exon6;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 2167 2277 . + 0 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 2935 3138 . + . ID=g83.t1.exon7;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 2935 3138 . + 0 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . exon 3353 3502 . + . ID=g83.t1.exon8;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . CDS 3353 3403 . + 0 ID=cds.g83.t1;Parent=g83.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 3404 3502 . + . ID=g83.t1.utr3p1;Parent=g83.t1 #PROT g83.t1 g83 RWFHGRITREAAEALLIGGSRHGDGHFLVRESTNFAGDYTLCVSFENTVQHYRVMRLDDGRLTIDEDVHFGTLGELIDHYRADRDCLVTELVSAVEKVPSQIKSIGAAWEIVRGEIILGKTIGSGQFGAVYEATYRGQKVAVKTLKDADAVATDFLGEAAVMTKLQHPNLVQLLGVCTDGSPIYIVTEFMAKGCLLDYLRSRGRGLITAPVLLEIATQIGSAMVYLESMGVVHRDLAARNILIGDNNVAKVADLGLARPADMSAPVSNEKEGKIPIKWTAPEALESNASTMADVWSFAVVLWELYSYGRTPYPRMSPEEVVSQLKGGYRMEAPEGCPPAVYAVMRSCWQVAPEQRPTFVDIERLLNRVPKT* # PASA_UPDATE: g85.t1, single gene model update, valid-1, status:[pasa:asmbl_5370,status:3], valid-1 NODE_29_length_59830_cov_43.247 . gene 5533 6734 . + . ID=g85;Name=g85.t1 NODE_29_length_59830_cov_43.247 . mRNA 5533 6734 . + . ID=g85.t1;Parent=g85;Name=g85.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 5533 5581 . + . ID=g85.t1.utr5p1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 5533 5620 . + . ID=g85.t1.exon1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 5582 5620 . + 0 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 5697 5771 . + . ID=g85.t1.exon2;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 5697 5771 . + 0 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 5857 5909 . + . ID=g85.t1.exon3;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 5857 5909 . + 0 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 5994 6153 . + . ID=g85.t1.exon4;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 5994 6153 . + 1 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 6243 6451 . + . ID=g85.t1.exon5;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 6243 6451 . + 0 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . exon 6591 6734 . + . ID=g85.t1.exon6;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . CDS 6591 6714 . + 1 ID=cds.g85.t1;Parent=g85.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 6715 6734 . + . ID=g85.t1.utr3p1;Parent=g85.t1 #PROT g85.t1 g85 MNRTPSVRPELQQEVSLYTSSQEREQFDNLAELFAIVQTIEYLEKAYIKDAITPKEYTPACERLIAQYKTAQALVKDVVPNLHEFMKDYRLNAPAALTRLEIGVPATIEHGGMGEGDSRKSAMHVAEAVQNFITLMDSLKLNLVAVDQIHPLLNDLLESINKLSSLSPTWEGKVKVKNWLLTLNKMKASDELTEEQVRQLLFDLESAHSMFYRSLADHS* # ORIGINAL: g97.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 40739 43747 . + . ID=g97;Name=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 40739 43747 . + . ID=g97.t1;Parent=g97;Name=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 40739 40846 . + . ID=g97.t1.exon1;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 40739 40846 . + 0 ID=cds.g97.t1;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 41094 41153 . + . ID=g97.t1.exon2;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 41094 41153 . + 0 ID=cds.g97.t1;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 41339 42802 . + . ID=g97.t1.exon3;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 41339 42802 . + 0 ID=cds.g97.t1;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 43265 43357 . + . ID=g97.t1.exon4;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 43265 43357 . + 0 ID=cds.g97.t1;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 43511 43747 . + . ID=g97.t1.exon5;Parent=g97.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 43511 43747 . + 0 ID=cds.g97.t1;Parent=g97.t1 #PROT g97.t1 g97 MAAVRAVHAAGQSRPYAQLDGVSAAQYSAADVGKIKATASVVFAGIPPAVASTLFQYDFSLEKRVVAAASARREARERARAEEERRAAAAAAAIAAEQEKRRIAAEVARTEAAEAQALAEAEKARAAAAVAAAGAKVLPTLPSTGVLLTPSVVAAGGRDSVWASSGIAVPRRPARAPAGGRSEYAEFENNGDNPFETAELQSINDLAELKALLGDGRGGVDPPHDGGHVSTRSEAVHGECNGINGVESDGDDSEEDDDAMGEFVGAEPSAAPDAKHRRRPTVKPRPYPPGSRGSSTSVDGDAPPPTLPPKSDTVRERAASLSRPPPLPPKTAFSYDGHVSQSPTAARASLSASGSGGRLQQGAPVTWPVGQPAAPKSHNPFEADAAMAAAMVPAHGYGTSGGIPDRSAAPPRPPKRMDAGGGGLATPDSFGSASFSAYSNTDPVHSSGAESWQQQQQQQPYHQQHSNHSVGRRSSGAAPAPAHAQAPAFSGASRHSTLPAVPSTVAGQQYPGRGDQSAGAGPSYPSVRPQYPSPFAGSQQARATGDPSFDSLVGMGFPSARVKKALDYGKRDQKKAIDFLVLYQEFSDQKYDGDSIETALHLFDLDADKARKFLASCVRLGELGFPPDRTREALLLADCDPDDALDLLVSNKV* # ORIGINAL: g84.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 3596 5002 . - . ID=g84;Name=g84.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 3596 5002 . - . ID=g84.t1;Parent=g84;Name=g84.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 4906 5002 . - . ID=g84.t1.exon1;Parent=g84.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 4906 5002 . - 0 ID=cds.g84.t1;Parent=g84.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 3596 4806 . - . ID=g84.t1.exon2;Parent=g84.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 3596 4806 . - 2 ID=cds.g84.t1;Parent=g84.t1 #PROT g84.t1 g84 MLTPTTAHVHPAAHGGLGHTQTHNAGDQFKGTDAASQLSPGCAHTPGTAPGNVGILSALTEAPPGNPRVVHRGTLAALFRREGLLEMQHRPDARGVRPASLSPFQGRVLRISLTPSQSLLGASYVLSAVLVWRCLATSADLLALSMLTVCAWYLYAENCPYHAHQRSHAELLDPAAAHDGHDVHARRTYPASCLKDRRASSLSPHSRQQGTAGHPTCKRVRFDDGAPLTAQSHSRGAAGFAQDSGNSSPSNCQRNAAAVGSAVVGCCDVGAESVDAQRERERMSGDGCDRPQAVRELLVAEMSEAVHPTLGALLDAVVPRDGLIGWHYERSTGEFALSLARPMVGHVSGVGPMGLRLSRVLALHVSSAVRGRVTMGGHCVDFEDSCLGVKMAWLPEIGVGRVTVEERDGALHLRHMGWSLSDEQIRDTVRNVVWG* # ORIGINAL: g89.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 21520 22962 . - . ID=g89;Name=g89.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 21520 22962 . - . ID=g89.t1;Parent=g89;Name=g89.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 21520 22962 . - . ID=g89.t1.exon1;Parent=g89.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 21520 22962 . - 0 ID=cds.g89.t1;Parent=g89.t1 #PROT g89.t1 g89 MKERDNLRWKLSVLQAKSGIEPELKKCKRFARWRAADGANDATGEKKSSDAVVSVDSAHAIGLLSEQKRQRRTHALRKVLRKELKKARVFEMRKLTRTLRRLREKAGEGDDAARAVAEKGVGAALRDIEEVKKVCLETLAECAWKSLVEGDSSSGGVVGDHKPHEFGRVEGRLVRSRAVTTKIAEIKAALDGGEKGLTSAPASASGAGNAAGKGTAHAGAAATEGPTADSRARVAKRSKEKRNDANGSAGGHGHRELGGSDGDGDSSAEDAAADASDDSNGSGGSGDSNGSGGSNSGVSVSDVSDVSVSDVELDGDDASVEDTDIFTSSLRASAVGVKKGGVKKGRKAKIEKIEGRKNRPGQRARQQQWESMYGAQAKHVSEGGERGARGGRGSSRGTMRGRGAFRGAAFGRGGGGARDGGIRGGGRLSRGGGGRGSLGPLLLPTAPPVQSHPSWAASQKRKAEASAIDSFAGKKMKFDE* # ORIGINAL: g88.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 18590 20869 . - . ID=g88;Name=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 18590 20869 . - . ID=g88.t1;Parent=g88;Name=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 20747 20869 . - . ID=g88.t1.exon1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 20747 20869 . - 0 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 20552 20594 . - . ID=g88.t1.exon2;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 20552 20594 . - 0 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 20161 20253 . - . ID=g88.t1.exon3;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 20161 20253 . - 2 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 19760 19945 . - . ID=g88.t1.exon4;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 19760 19945 . - 2 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 19395 19556 . - . ID=g88.t1.exon5;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 19395 19556 . - 2 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 18839 19252 . - . ID=g88.t1.exon6;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 18839 19252 . - 2 ID=cds.g88.t1;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 18590 18684 . - . ID=g88.t1.exon7;Parent=g88.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 18590 18684 . - 2 ID=cds.g88.t1;Parent=g88.t1 #PROT g88.t1 g88 MSEGALVDKFFKVIRNGDATLVQGLLEQSPSFAQCKNKKGQTAVLHAIECAEYEIAQLLISKGADPNAADNTKTTPLIAAICGGHDEAVSSLLAVKSVKADVADADGYTPLHWAVRLGNESAVNALLERKANPNAATTKSKVAPVHSAAAEGFLAAIRSLASAGADVAAVDADGNSALQYAVTNNRPECVVALLDLGCKPRGDECLLHAAVQDGNAAVVRALVDRGVPTDTADAAGHSALDLAEARAAAFPSSSDARSICDALVSAGARTRKAYEVPQAQEQKQQQAGVDRRERGAAAQNSKDGGDAEKEKAARAGAARQLHERGGPRVAKSRAKADHDRGSRTVTYVVLAIVVALFAAMLAAVFLPATNK* # ORIGINAL: g103.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 55435 59609 . + . ID=g103;Name=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 55435 59609 . + . ID=g103.t1;Parent=g103;Name=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 55435 55593 . + . ID=g103.t1.exon1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 55435 55593 . + 0 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 55687 55771 . + . ID=g103.t1.exon2;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 55687 55771 . + 0 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 55865 55997 . + . ID=g103.t1.exon3;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 55865 55997 . + 2 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 56204 56382 . + . ID=g103.t1.exon4;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 56204 56382 . + 1 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 56699 56827 . + . ID=g103.t1.exon5;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 56699 56827 . + 2 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 56994 57178 . + . ID=g103.t1.exon6;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 56994 57178 . + 2 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 57568 57768 . + . ID=g103.t1.exon7;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 57568 57768 . + 0 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 58018 58207 . + . ID=g103.t1.exon8;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 58018 58207 . + 0 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 58401 58564 . + . ID=g103.t1.exon9;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 58401 58564 . + 2 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 58811 58903 . + . ID=g103.t1.exon10;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 58811 58903 . + 0 ID=cds.g103.t1;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 59067 59609 . + . ID=g103.t1.exon11;Parent=g103.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 59067 59609 . + 0 ID=cds.g103.t1;Parent=g103.t1 #PROT g103.t1 g103 MAEEFGSRYLRVCGELAVDPLQTVLDAVRGARANDSKGSPRLLDLTGINLTIKACVALGMTLRDDSYFAELSLADCMLGDAGCQAIMSCLKSNMALRKVDLKGNNVRAQGAAAIADMLKANAYLKSLSLEWNGIGIWETGVAAISEAIGLNQTLERLDLRNNQINPAGAREIATAVKHNSALRTLDIRWNNCGSIGGKAFLDALRWNATLLNIDLVGNLVPEDVIKAIASCLERNRVRHRMSLEAEARAAGVGRELHSVHAEYEARVAQLAAAAEKAKADAARISGDYGETVNRLENSLEERKAAFEASERARAELDGSRDALEKRVAELETVIAQLKKDERTIAAKWHDTLLKEKQVRAEAEERARRELEERMGHYLTLEGLLKDTEMRAALSEKDAAALRRELERARQKENDRNAEFEERLSDRDRAHERVLEAQRRKAQEDLDALRKEFEGKERRHGDRLRDSANEKAALQQAIDRHASELAALKLHGERDAKAIESRLRQEMATLAESHESRHRTLLAARDELARQVEDLSRQVAEHRQRRAEAVQSLEIAERRLDDAKREKNTEVAAAKADATRVRGDLSAAVARADAASVAEKSVRDDLLRAQQQLERYHRDNADALARAKKEAADAVAEANVLKEVLRRRDAEVESFRQEELKRVGMIESVLGGYVSSARTRLESRTAA* # PASA_UPDATE: g102.t1, single gene model update, valid-1, status:[pasa:asmbl_5368,status:12], valid-1 NODE_29_length_59830_cov_43.247 . gene 52708 54720 . - . ID=g102;Name=g102.t1 NODE_29_length_59830_cov_43.247 . mRNA 52708 54720 . - . ID=g102.t1;Parent=g102;Name=g102.t1 NODE_29_length_59830_cov_43.247 . exon 54654 54720 . - . ID=g102.t1.exon1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 54654 54720 . - 0 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . exon 54412 54485 . - . ID=g102.t1.exon2;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 54412 54485 . - 2 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . exon 54133 54270 . - . ID=g102.t1.exon3;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 54133 54270 . - 0 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . exon 53955 54028 . - . ID=g102.t1.exon4;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 53955 54028 . - 0 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . exon 53527 53822 . - . ID=g102.t1.exon5;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 53527 53822 . - 1 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . exon 52708 53246 . - . ID=g102.t1.exon6;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . CDS 52888 53246 . - 2 ID=cds.g102.t1;Parent=g102.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 52708 52887 . - . ID=g102.t1.utr3p1;Parent=g102.t1 #PROT g102.t1 g102 MGSYAMEFPMRDGVNCTAEWIKADPTTFDVVAGSIILVGILLSYLPQHITIVVRKSSEGISSLFLLLGTFSAVTSLLNAFVLQYDTLACCSSWGFRRCNIEMLKIYQLSVQAACLYGVFILFLIYFKVKREGRHELVMARILFGVSVSLSVLFSIILACMISTLGGTSRPVHYYGVSLGIFSVGAVLLQYLPQLYKTFRRKDPGSLSIPMMMIQTPGTFIWTYFLASGHDASVTTWLPYLTTACLQGTLLIMCIIFWWRNKRNPPVFYDELNGDDSTGAGGKHRGINDSDSRDGDDDEGDDSDRVDGTDEDALVDYPGRKPTGMENDKVFRYGSI* # ORIGINAL: g91.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 25835 28434 . - . ID=g91;Name=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 25835 28434 . - . ID=g91.t1;Parent=g91;Name=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 27686 28434 . - . ID=g91.t1.exon1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 27686 28434 . - 0 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 27371 27524 . - . ID=g91.t1.exon2;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 27371 27524 . - 1 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 26751 27191 . - . ID=g91.t1.exon3;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 26751 27191 . - 0 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 26515 26629 . - . ID=g91.t1.exon4;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 26515 26629 . - 0 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 26285 26379 . - . ID=g91.t1.exon5;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 26285 26379 . - 2 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 26075 26177 . - . ID=g91.t1.exon6;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 26075 26177 . - 0 ID=cds.g91.t1;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 25835 25914 . - . ID=g91.t1.exon7;Parent=g91.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 25835 25914 . - 2 ID=cds.g91.t1;Parent=g91.t1 #PROT g91.t1 g91 MAENDTLRWCAREISSLMGFEGAEIARHLVSINNAEQLRGHTRELLGTTPGALSVLAELERRLQLRLGGVIDSGAGGEIRAYVKPGKDTQVYMAGKGGKGAQQQQTQMQHIQQQQQQQQQQQQQQLLAQQQAARQAGGKKAKYVNVDSDDGRRLAGDGLHGGRKRCECEASKHALVGNCRSCGRIVCEQEGAGPCVFCGESVYTREQREIIDRNSKKSQKLKEKLERTFADGGGIDADESLVKAKALRDRLLEYARSGAKRTRVYDDESDYFQVDGNRWLSEDQRKALKKYEDDARARKEAARKEIRVTLDFAGRRVTEDDPDERADCDLYSAAAAEVAEILVAEAARGAGTVDPRALTTAVPAPVYVSQDAKGPSAGEAKAPKWVRPAAATPALSSSSTSTSAVAAHSAPVSRVQDRALREMADGGMCLSMHQPWASLLVGGIKQVEGRSWYSSHRGRLWIAAAAKEPTDDVIEAVQNEYRKLRKDPTLAFPEYPTGCLLGCVDVVDCLTRDEFARAISDGDAESESLYVFVCENPQSLPIKLPIKGQHKIWSLDKKIHEAARHGLMHLRASSMASD* # ORIGINAL: g99.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 48184 49510 . - . ID=g99;Name=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 48184 49510 . - . ID=g99.t1;Parent=g99;Name=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 49360 49510 . - . ID=g99.t1.exon1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 49360 49510 . - 0 ID=cds.g99.t1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 49063 49254 . - . ID=g99.t1.exon2;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 49063 49254 . - 2 ID=cds.g99.t1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 48865 48923 . - . ID=g99.t1.exon3;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 48865 48923 . - 2 ID=cds.g99.t1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 48636 48714 . - . ID=g99.t1.exon4;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 48636 48714 . - 0 ID=cds.g99.t1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 48432 48545 . - . ID=g99.t1.exon5;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 48432 48545 . - 2 ID=cds.g99.t1;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 48184 48305 . - . ID=g99.t1.exon6;Parent=g99.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 48184 48305 . - 2 ID=cds.g99.t1;Parent=g99.t1 #PROT g99.t1 g99 MVNADAVSPIQGSVGVDLKSYDDTQVKLLDEMCIVVDENDNAIGEDTKKNCHLKTNIEAGLLHRAFSVFLFNSKGELLLQQRSDEKITFPGYYTNTCCSHPLSVKPELELKDQLGAKRAAQRKLEHELGIKPEQLPLDSFQFLTRIHYKAISDDIWGEHEVDYIFFVQRDVELNPNLNEVKSIRYVTMDELKAFLSSADQSGLPITPWFRLIVNNFLYKWWDDLACVGAHTDAAIHRL* # ORIGINAL: g98.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 44204 47634 . - . ID=g98;Name=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 44204 47634 . - . ID=g98.t1;Parent=g98;Name=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 47578 47634 . - . ID=g98.t1.exon1;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 47578 47634 . - 0 ID=cds.g98.t1;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 47358 47430 . - . ID=g98.t1.exon2;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 47358 47430 . - 0 ID=cds.g98.t1;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 46908 47008 . - . ID=g98.t1.exon3;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 46908 47008 . - 2 ID=cds.g98.t1;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 46610 46690 . - . ID=g98.t1.exon4;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 46610 46690 . - 0 ID=cds.g98.t1;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 44204 46414 . - . ID=g98.t1.exon5;Parent=g98.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 44204 46414 . - 0 ID=cds.g98.t1;Parent=g98.t1 #PROT g98.t1 g98 MAKDSSPRGEVDTPRSVVERMFSRALSIGDKVDARWVDGSFYPGKIVSVHNPNRFHILFTDGDCLLVDRIDISDTDYSRDADEESPTRDRVAVVRTPVSTDAKKRMRDEKERGDADGKPVVVKKARVDNGGVRIRVAKAAGDGATAPRPKGDDKEKDSHKDKDKDKDKDGETDKNVKERDDLRVLAPDEAIERGLAAIRSACDELKVSASVHLRAETIFKLCEHNGIFPCVTELDVACSATAAMFISCRQDGLACTYQELCSRRKVPKLRVSQLSKSAAAHLKIDVEIIPSRAFAENYCASLPIDKERQDLLVDATIRAHGVPYSGHKSIANVTLALMTMILAPNEACNVGECGVPLSSIRPLVRHLAPMVDFLFPRDYVFPSPSAADVLFPSNLDGAEEPPVAAAHRKPGRPPKNVHPSITAPKVPPARLTLKKKEHGHGKGSGQSSRAALNDSAGSADGHRDLHASQQFESSGHQAPGGYSFDGDASAASGARGGGGYHEADGDARLKTIRPLRADGKRQMPTGKNLQPAPAPAPAPQPIVQAPVQPHLYYTPMMRYLPLPQYTLHSAPVFAPRSMAKVWESNGTRSRSSGPRFDPAEDITLKVVSELERSIEVDQSLRTEIMRAYPGDDPRAAEGAERWKENARHRGPGRDADVDEGQRSAEGDNDGDVHGGDARTGAGDDGGRHVMGEDDAIDREMLRHAAYHGDKERDRDRDWDRDRDRERHGVSPTSQRPMYAQGYENDGYGRAGRQGQGPAVAYHPGVMSAYSPSMHAQAPPGGGQRHSHGLARSFHGMSGGMPMDASPPFVQAPPPHYPIGHPAAHPYSQGVPRQYMGHPHY* # PASA_UPDATE: g86.t1, single gene model update, valid-1, status:[pasa:asmbl_5375,status:3], valid-1 # PASA_UPDATE: g86.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5376,status:12], valid-1 # PASA_UPDATE: g86.t1.2.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5377,status:12], valid-1 NODE_29_length_59830_cov_43.247 . gene 7288 10206 . - . ID=g86;Name=g86.t1 NODE_29_length_59830_cov_43.247 . mRNA 7288 10206 . - . ID=g86.t1;Parent=g86;Name=g86.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 10042 10206 . - . ID=g86.t1.utr5p1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 9983 10206 . - . ID=g86.t1.exon1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 9983 10041 . - 0 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 9838 9893 . - . ID=g86.t1.exon2;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 9838 9893 . - 1 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 9515 9728 . - . ID=g86.t1.exon3;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 9515 9728 . - 2 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 9289 9419 . - . ID=g86.t1.exon4;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 9289 9419 . - 1 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 8589 9089 . - . ID=g86.t1.exon5;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 8589 9089 . - 2 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 8279 8481 . - . ID=g86.t1.exon6;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 8279 8481 . - 2 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . exon 7288 8184 . - . ID=g86.t1.exon7;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . CDS 7408 8184 . - 0 ID=cds.g86.t1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 7288 7407 . - . ID=g86.t1.utr3p1;Parent=g86.t1 NODE_29_length_59830_cov_43.247 . mRNA 7288 10205 . - . ID=g86.t1.1.5b6be70b;Parent=g86;Name=g86.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 9983 10205 . - . ID=g86.t1.1.5b6be70b.utr5p1;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . five_prime_UTR 9838 9893 . - . ID=g86.t1.1.5b6be70b.utr5p2;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . five_prime_UTR 9311 9728 . - . ID=g86.t1.1.5b6be70b.utr5p3;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9983 10205 . - . ID=g86.t1.1.5b6be70b.exon1;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9838 9893 . - . ID=g86.t1.1.5b6be70b.exon2;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9289 9728 . - . ID=g86.t1.1.5b6be70b.exon3;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 9289 9310 . - 0 ID=cds.g86.t1.1.5b6be70b;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 8589 9089 . - . ID=g86.t1.1.5b6be70b.exon4;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 8589 9089 . - 2 ID=cds.g86.t1.1.5b6be70b;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 8279 8481 . - . ID=g86.t1.1.5b6be70b.exon5;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 8279 8481 . - 2 ID=cds.g86.t1.1.5b6be70b;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 7288 8184 . - . ID=g86.t1.1.5b6be70b.exon6;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 7408 8184 . - 0 ID=cds.g86.t1.1.5b6be70b;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . three_prime_UTR 7288 7407 . - . ID=g86.t1.1.5b6be70b.utr3p1;Parent=g86.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . mRNA 7288 10206 . - . ID=g86.t1.2.5b6be70b;Parent=g86;Name=g86.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 9983 10206 . - . ID=g86.t1.2.5b6be70b.utr5p1;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . five_prime_UTR 9515 9893 . - . ID=g86.t1.2.5b6be70b.utr5p2;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . five_prime_UTR 9311 9419 . - . ID=g86.t1.2.5b6be70b.utr5p3;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9983 10206 . - . ID=g86.t1.2.5b6be70b.exon1;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9515 9893 . - . ID=g86.t1.2.5b6be70b.exon2;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 9289 9419 . - . ID=g86.t1.2.5b6be70b.exon3;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 9289 9310 . - 0 ID=cds.g86.t1.2.5b6be70b;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 8589 9089 . - . ID=g86.t1.2.5b6be70b.exon4;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 8589 9089 . - 2 ID=cds.g86.t1.2.5b6be70b;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 8279 8481 . - . ID=g86.t1.2.5b6be70b.exon5;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 8279 8481 . - 2 ID=cds.g86.t1.2.5b6be70b;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . exon 7288 8184 . - . ID=g86.t1.2.5b6be70b.exon6;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 7408 8184 . - 0 ID=cds.g86.t1.2.5b6be70b;Parent=g86.t1.2.5b6be70b NODE_29_length_59830_cov_43.247 . three_prime_UTR 7288 7407 . - . ID=g86.t1.2.5b6be70b.utr3p1;Parent=g86.t1.2.5b6be70b #PROT g86.t1 g86 MSTPSSSFLANLPNSTGATSRPASFSPSSPIGGYLSSHPHSIGRFEADFVQLDILGRGTFGQVIKAQNKVDNVAYAIKRIRLKSDSPSAERKIIREVSTLSRLSHPHIVRYYQAWFEDSDARGRVGCTESDDESEVEDVSRGSAFSMDASDDIVFFDDDDANEDVSTTHRDSLADSGISSAKNRRLHSRGNQSVQLTCDMCRTRYEDWEVLLEQWQLVRGALHSYCLCQDCFVGDLQAQGLHSIVPLIRFQPKVPPSPMYLFIQMEFCQSTLRAAIDGGQLAGHERLVWRLFEQIVDGLAYIHDQNMIHRDLKPDNIFLSGVDALGRKGQQLDERDYGKISVKIGDFGLAKELEPIPSPSESIDANVWQEHKYMPKSPNGLPSNDTSEVGTFLYSSEARDDNGRSSGDMYSVGVILFEMLHPPFATQMERVVTLQHLRRQQAFPHEFDKVHFEASIVIRRLMHPESSRRPSARELLRMIAEMSVRSVAMNQAGITRRFTAMDAVESAVTSRHTELSKSPRNGSALASVADVEFPPMLWQHNLHALQSIMKSDMLLADLGRKYEATTRQLCEAGPGHGTWLATELDSESPSGGGHSLLDSRKRPLTIGESQTSKSLEFSRMTMVRQRMIVQDEIIALLLQRLDSASM* #PROT g86.t1.1.5b6be70b g86 MDASDDIVFFDDDDANEDVSTTHRDSLADSGISSAKNRRLHSRGNQSVQLTCDMCRTRYEDWEVLLEQWQLVRGALHSYCLCQDCFVGDLQAQGLHSIVPLIRFQPKVPPSPMYLFIQMEFCQSTLRAAIDGGQLAGHERLVWRLFEQIVDGLAYIHDQNMIHRDLKPDNIFLSGVDALGRKGQQLDERDYGKISVKIGDFGLAKELEPIPSPSESIDANVWQEHKYMPKSPNGLPSNDTSEVGTFLYSSEARDDNGRSSGDMYSVGVILFEMLHPPFATQMERVVTLQHLRRQQAFPHEFDKVHFEASIVIRRLMHPESSRRPSARELLRMIAEMSVRSVAMNQAGITRRFTAMDAVESAVTSRHTELSKSPRNGSALASVADVEFPPMLWQHNLHALQSIMKSDMLLADLGRKYEATTRQLCEAGPGHGTWLATELDSESPSGGGHSLLDSRKRPLTIGESQTSKSLEFSRMTMVRQRMIVQDEIIALLLQRLDSASM* #PROT g86.t1.2.5b6be70b g86 MDASDDIVFFDDDDANEDVSTTHRDSLADSGISSAKNRRLHSRGNQSVQLTCDMCRTRYEDWEVLLEQWQLVRGALHSYCLCQDCFVGDLQAQGLHSIVPLIRFQPKVPPSPMYLFIQMEFCQSTLRAAIDGGQLAGHERLVWRLFEQIVDGLAYIHDQNMIHRDLKPDNIFLSGVDALGRKGQQLDERDYGKISVKIGDFGLAKELEPIPSPSESIDANVWQEHKYMPKSPNGLPSNDTSEVGTFLYSSEARDDNGRSSGDMYSVGVILFEMLHPPFATQMERVVTLQHLRRQQAFPHEFDKVHFEASIVIRRLMHPESSRRPSARELLRMIAEMSVRSVAMNQAGITRRFTAMDAVESAVTSRHTELSKSPRNGSALASVADVEFPPMLWQHNLHALQSIMKSDMLLADLGRKYEATTRQLCEAGPGHGTWLATELDSESPSGGGHSLLDSRKRPLTIGESQTSKSLEFSRMTMVRQRMIVQDEIIALLLQRLDSASM* # PASA_UPDATE: g94.t1, single gene model update, valid-1, status:[pasa:asmbl_5379,status:12], valid-1 NODE_29_length_59830_cov_43.247 . gene 32811 33728 . - . ID=g94;Name=g94.t1 NODE_29_length_59830_cov_43.247 . mRNA 32811 33728 . - . ID=g94.t1;Parent=g94;Name=g94.t1 NODE_29_length_59830_cov_43.247 . exon 33640 33728 . - . ID=g94.t1.exon1;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . CDS 33640 33728 . - 0 ID=cds.g94.t1;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . exon 33356 33484 . - . ID=g94.t1.exon2;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . CDS 33356 33484 . - 1 ID=cds.g94.t1;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . exon 32811 33195 . - . ID=g94.t1.exon3;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . CDS 33084 33195 . - 1 ID=cds.g94.t1;Parent=g94.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 32811 33083 . - . ID=g94.t1.utr3p1;Parent=g94.t1 #PROT g94.t1 g94 MAAVNQQVAMQMADSVTDTAVVMALPACEFHLEVPFPSAHYATIACRTLSVDKEPRRSEVSKSLSVRDNFLIAHFIASEERLLRVSVGTFLDFLALITNTMEQHGPPRL* # PASA_UPDATE: g87.t1, single gene model update, valid-1, status:[pasa:asmbl_5372,status:3], valid-1 # PASA_UPDATE: g87.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5373,status:3], valid-1 NODE_29_length_59830_cov_43.247 . gene 11195 18570 . + . ID=g87;Name=g87.t1 NODE_29_length_59830_cov_43.247 . mRNA 11195 18570 . + . ID=g87.t1;Parent=g87;Name=g87.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 11195 11343 . + . ID=g87.t1.utr5p1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 11195 11581 . + . ID=g87.t1.exon1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 11344 11581 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 11963 12004 . + . ID=g87.t1.exon2;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 11963 12004 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 12282 12304 . + . ID=g87.t1.exon3;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 12282 12304 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 12854 12970 . + . ID=g87.t1.exon4;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 12854 12970 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 13270 13452 . + . ID=g87.t1.exon5;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 13270 13452 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 13706 13863 . + . ID=g87.t1.exon6;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 13706 13863 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 14119 14243 . + . ID=g87.t1.exon7;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 14119 14243 . + 1 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 14407 14545 . + . ID=g87.t1.exon8;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 14407 14545 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 14794 14930 . + . ID=g87.t1.exon9;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 14794 14930 . + 1 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 15095 15790 . + . ID=g87.t1.exon10;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 15095 15790 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 16008 16267 . + . ID=g87.t1.exon11;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 16008 16267 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 16414 16493 . + . ID=g87.t1.exon12;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 16414 16493 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 16624 16746 . + . ID=g87.t1.exon13;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 16624 16746 . + 1 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 16866 17004 . + . ID=g87.t1.exon14;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 16866 17004 . + 1 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 17202 17412 . + . ID=g87.t1.exon15;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 17202 17412 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 17566 17667 . + . ID=g87.t1.exon16;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 17566 17667 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 17813 17962 . + . ID=g87.t1.exon17;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 17813 17962 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 18125 18207 . + . ID=g87.t1.exon18;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 18125 18207 . + 2 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . exon 18314 18570 . + . ID=g87.t1.exon19;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . CDS 18314 18499 . + 0 ID=cds.g87.t1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . three_prime_UTR 18500 18570 . + . ID=g87.t1.utr3p1;Parent=g87.t1 NODE_29_length_59830_cov_43.247 . mRNA 11195 18570 . + . ID=g87.t1.1.5b6be70b;Parent=g87;Name=g87.t1 NODE_29_length_59830_cov_43.247 . five_prime_UTR 11195 11343 . + . ID=g87.t1.1.5b6be70b.utr5p1;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 11195 11581 . + . ID=g87.t1.1.5b6be70b.exon1;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 11344 11581 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 11963 12004 . + . ID=g87.t1.1.5b6be70b.exon2;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 11963 12004 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 12282 12304 . + . ID=g87.t1.1.5b6be70b.exon3;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 12282 12304 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 12854 12970 . + . ID=g87.t1.1.5b6be70b.exon4;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 12854 12970 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 13270 13452 . + . ID=g87.t1.1.5b6be70b.exon5;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 13270 13452 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 13706 13863 . + . ID=g87.t1.1.5b6be70b.exon6;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 13706 13863 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 14119 14243 . + . ID=g87.t1.1.5b6be70b.exon7;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 14119 14243 . + 1 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 14407 14545 . + . ID=g87.t1.1.5b6be70b.exon8;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 14407 14545 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 14794 14930 . + . ID=g87.t1.1.5b6be70b.exon9;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 14794 14930 . + 1 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 15095 15790 . + . ID=g87.t1.1.5b6be70b.exon10;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 15095 15790 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 16008 16267 . + . ID=g87.t1.1.5b6be70b.exon11;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 16008 16267 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 16414 16493 . + . ID=g87.t1.1.5b6be70b.exon12;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 16414 16493 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 16624 16746 . + . ID=g87.t1.1.5b6be70b.exon13;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 16624 16746 . + 1 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 16866 17004 . + . ID=g87.t1.1.5b6be70b.exon14;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 16866 17004 . + 1 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 17202 17412 . + . ID=g87.t1.1.5b6be70b.exon15;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 17202 17412 . + 0 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 17566 17962 . + . ID=g87.t1.1.5b6be70b.exon16;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . CDS 17566 17714 . + 2 ID=cds.g87.t1.1.5b6be70b;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 18125 18207 . + . ID=g87.t1.1.5b6be70b.exon17;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . exon 18314 18570 . + . ID=g87.t1.1.5b6be70b.exon18;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . three_prime_UTR 17715 17962 . + . ID=g87.t1.1.5b6be70b.utr3p1;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . three_prime_UTR 18125 18207 . + . ID=g87.t1.1.5b6be70b.utr3p2;Parent=g87.t1.1.5b6be70b NODE_29_length_59830_cov_43.247 . three_prime_UTR 18314 18570 . + . ID=g87.t1.1.5b6be70b.utr3p3;Parent=g87.t1.1.5b6be70b #PROT g87.t1 g87 MGSCGLDVAVRLLLFLSICCIHLHSGVASVSGLQSSSGRRPAAEYGLKSTQLLSGGVNDPSHHGADRRSGSTCPNLPPRAEPPPLLKALFLFNGPIGDLGWTYAAQQGRLFLQDKFREKILIEHVVVPDVTDEDRIKHIQIIHEYYARGFNLTVGFSFGFQDALYNTSATLTDMYFINISGYLTRNNMVTAFARIDQMRYLAGILAGKFTQAESICYVAAVKIPEVYRGLNAFAIGVKKANPTAKVHVMWTNTWYDPELEAYTARLLFNTTCCDIITQHADTLETPRVARDLQKWAIGYHSDMSTFLGERVLASVVWNWGPMLVDIVGKLMNNTWEPNADYWPGLEEDTVQLTQLSFKVPGAIKDAVNAEHTRLKTLPSLPRDDIFCGPIVNRSSGDCMSDNEIRGFDGTIDGPITGTGMQNYVANVIYHGNSVLPPPPCLLTCSGNGQCVNYACVCNPGYLGSNCDIKVSDSSNTGAIVGGAVGGGVGLLLVLLGFIAYQRSRTRKLLRDAWKIAVEDIEVKARRAFGSEGHVGRSQLSFRSRASKTSSAHAARGSVTVASHKGKLVALRELRESIDHDRMAINEMLRVRELDHANVVKVIGGTVAPPYYIVTEFVAKGTLDEILRNDRLPLDMMFKAAMAKDVARGMTYLHKMGIAHGGLHPSKVLLTEGFSCKIAGAGMPSIMALREGVEESDFSAFSKKLYQAPEVLEGSVGADLQAKMMADVYSYGIVLYEIVTRRYAFDGMDLDVEKKVQKVLETGARPDIEVDVEPRASALIRSCWDKDPFARPSFEGVMRKARALSPDGGSIIEKMLYMLQQYADNLEGLVEERTSELQAEKRRTDQLLYQMLPESVANDLRLGKPPPSEKFDAVTILFTDVVRFTDLSAKSEPIQIVHLLNRLYTCFDTILTRHEVYKVETIGDAYMVVSGLPKRTERHAEHIAEQALDMIEGVQHIDMHDQVEKELRIRAGIHSGSVVAGVVGLKMPRYCLFGDTVNTASRMESNSAALRIHMSETTYNLLQGTGRYTVEDRGEIEIKGKGTMHTYWLTGRAAAAATAPVLGE* #PROT g87.t1.1.5b6be70b g87 MGSCGLDVAVRLLLFLSICCIHLHSGVASVSGLQSSSGRRPAAEYGLKSTQLLSGGVNDPSHHGADRRSGSTCPNLPPRAEPPPLLKALFLFNGPIGDLGWTYAAQQGRLFLQDKFREKILIEHVVVPDVTDEDRIKHIQIIHEYYARGFNLTVGFSFGFQDALYNTSATLTDMYFINISGYLTRNNMVTAFARIDQMRYLAGILAGKFTQAESICYVAAVKIPEVYRGLNAFAIGVKKANPTAKVHVMWTNTWYDPELEAYTARLLFNTTCCDIITQHADTLETPRVARDLQKWAIGYHSDMSTFLGERVLASVVWNWGPMLVDIVGKLMNNTWEPNADYWPGLEEDTVQLTQLSFKVPGAIKDAVNAEHTRLKTLPSLPRDDIFCGPIVNRSSGDCMSDNEIRGFDGTIDGPITGTGMQNYVANVIYHGNSVLPPPPCLLTCSGNGQCVNYACVCNPGYLGSNCDIKVSDSSNTGAIVGGAVGGGVGLLLVLLGFIAYQRSRTRKLLRDAWKIAVEDIEVKARRAFGSEGHVGRSQLSFRSRASKTSSAHAARGSVTVASHKGKLVALRELRESIDHDRMAINEMLRVRELDHANVVKVIGGTVAPPYYIVTEFVAKGTLDEILRNDRLPLDMMFKAAMAKDVARGMTYLHKMGIAHGGLHPSKVLLTEGFSCKIAGAGMPSIMALREGVEESDFSAFSKKLYQAPEVLEGSVGADLQAKMMADVYSYGIVLYEIVTRRYAFDGMDLDVEKKVQKVLETGARPDIEVDVEPRASALIRSCWDKDPFARPSFEGVMRKARALSPDGGSIIEKMLYMLQQYADNLEGLVEERTSELQAEKRRTDQLLYQMLPESVANDLRLGKPPPSEKFDAVTILFTDVVRFTDLSAKSEPIQIVHLLNRLYTCFDTILTRHEVYKVETIGDACKWSIRQTLELRALR* # ORIGINAL: g96.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 37569 38789 . - . ID=g96;Name=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 37569 38789 . - . ID=g96.t1;Parent=g96;Name=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 38677 38789 . - . ID=g96.t1.exon1;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 38677 38789 . - 0 ID=cds.g96.t1;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 38329 38431 . - . ID=g96.t1.exon2;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 38329 38431 . - 1 ID=cds.g96.t1;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 37987 38187 . - . ID=g96.t1.exon3;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 37987 38187 . - 0 ID=cds.g96.t1;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 37569 37802 . - . ID=g96.t1.exon4;Parent=g96.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 37569 37802 . - 0 ID=cds.g96.t1;Parent=g96.t1 #PROT g96.t1 g96 MALGSHCATIRGLEWVRGDPVEIPTPGTIIVAEFWATWCPPCRSSIPHLSELQKKYRTHGVTFVGITNEDKSAAERFVRAMGSKMEYTVAVDGQLSAYSTLMQRAGARGIPHAFIIDGEGVVRFSGHPMDPTFEPTLAKVVSAHNTRLRNEERQTLQGPPPTMHSRDELMVLPVKDLKRILQDGGIESAGIIDKDSLVSRIVEAEAERAARREREE* # ORIGINAL: g100.t1 original gene structure, not modified by PASA NODE_29_length_59830_cov_43.247 AUGUSTUS gene 50108 51581 . + . ID=g100;Name=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS mRNA 50108 51581 . + . ID=g100.t1;Parent=g100;Name=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 50108 50839 . + . ID=g100.t1.exon1;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 50108 50839 . + 0 ID=cds.g100.t1;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 51027 51171 . + . ID=g100.t1.exon2;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 51027 51171 . + 0 ID=cds.g100.t1;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 51315 51351 . + . ID=g100.t1.exon3;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 51315 51351 . + 2 ID=cds.g100.t1;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS exon 51527 51581 . + . ID=g100.t1.exon4;Parent=g100.t1 NODE_29_length_59830_cov_43.247 AUGUSTUS CDS 51527 51581 . + 1 ID=cds.g100.t1;Parent=g100.t1 #PROT g100.t1 g100 MSRDLRASRRPHEEETAPGSLVVVILDTSPVLWAGRYGDGRVASDSVSFIEYIEAATVFINAHLLLQKGNRVAVIANHSDSRCEFLYVADDDSDGGSGHGNVASVESTDGKYERLGRVDQTVKERLERLAGDSVDDKDAPSPLSFSQLARSLSRALCHINRVTAKLPVGVTLQSRILVMTIAADIPSQYIMLMNCIFAAQKCGVAIDSLVLSKGDSGFLQQAADLTRGVYMKVSDEHNLLQYLMTVFLPDQRTRALLSHPRLREVDYRAACFCAGHKNIIIDTGYVCSVCLSLFCKKTSICSTCRTKFKTISAVPPQQLAPK* # PASA_UPDATE: g11490.t1, single gene model update, valid-1, status:[pasa:asmbl_1148,status:12], valid-1 NODE_1302_length_12285_cov_51.9336 . gene 7183 9525 . + . ID=g11490;Name=g11490.t1 NODE_1302_length_12285_cov_51.9336 . mRNA 7183 9525 . + . ID=g11490.t1;Parent=g11490;Name=g11490.t1 NODE_1302_length_12285_cov_51.9336 . exon 7183 7949 . + . ID=g11490.t1.exon1;Parent=g11490.t1 NODE_1302_length_12285_cov_51.9336 . CDS 7183 7949 . + 0 ID=cds.g11490.t1;Parent=g11490.t1 NODE_1302_length_12285_cov_51.9336 . exon 8207 9525 . + . ID=g11490.t1.exon2;Parent=g11490.t1 NODE_1302_length_12285_cov_51.9336 . CDS 8207 9272 . + 1 ID=cds.g11490.t1;Parent=g11490.t1 NODE_1302_length_12285_cov_51.9336 . three_prime_UTR 9273 9525 . + . ID=g11490.t1.utr3p1;Parent=g11490.t1 #PROT g11490.t1 g11490 MDGRLTSSLAVIATTPSVSDLCIRANVPCDVPGCTKVLPNVSCLRMHLVRHHGKPTVDGVSSATFNPRGALAASSAEGRKRRRIDNDMGHRVNQQEDSLNTGRVIQPSPTPAACDDACDDTPAGNMVSAVKTSELRGPAGASVNTPRVFFCPVALCERSSESAGTPFVRLGHLKQHYWSMHGDRRHACGRCGATFGLASVCTRHESECGALFLCGSCGGEFATKDRLRTHAKRTKCVGYRVVRADGEVSIRPGRKGNGDDVSAKAIGLLCLASIAQTDPPRGALSTAPALPLHTINVRSAAASAVRATDASSRNMTRAQQTRETQTTADTMYEMYVAAPERSVRVGGGGVSLSDSCSQTVFRFMQAVDVGVDAGGDFGEGAADGQDNMASRGRVEQHTQSDDVFGVETAEFACGGDSPLYGGDIVGVGDAAPSVAHVGVGDSYIYADTSGGDMLTAETHVSSHSACAQATTKSSRRSVACATVEVCTDNNDDSDDNDDNCDNDSSDGVHSRNAGRGNHSIRDNLQCVDYGTQTALSSYFVSDCADGWSHAVTKVQSPPVSAPSTGMRLPSIGVQTIDLYPAFLSHATVTMETQTFEDEFDSMFADRNTQT* # ORIGINAL: g11488.t1 original gene structure, not modified by PASA NODE_1302_length_12285_cov_51.9336 AUGUSTUS gene 79 3453 . - . ID=g11488;Name=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS mRNA 79 3453 . - . ID=g11488.t1;Parent=g11488;Name=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 3430 3453 . - . ID=g11488.t1.exon1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 3430 3453 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 3064 3153 . - . ID=g11488.t1.exon2;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 3064 3153 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 2773 2898 . - . ID=g11488.t1.exon3;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 2773 2898 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 1968 2135 . - . ID=g11488.t1.exon4;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 1968 2135 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 1399 1629 . - . ID=g11488.t1.exon5;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 1399 1629 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 1229 1275 . - . ID=g11488.t1.exon6;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 1229 1275 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 709 775 . - . ID=g11488.t1.exon7;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 709 775 . - 1 ID=cds.g11488.t1;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 79 540 . - . ID=g11488.t1.exon8;Parent=g11488.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 79 540 . - 0 ID=cds.g11488.t1;Parent=g11488.t1 #PROT g11488.t1 g11488 MGDAGFFRGTSIEQDARFHDKKKKLMKSMKFPAELDEKVDMHKVTLDAMKPWISTKVTQLLGFEDEVLIEFVITQLEKEQFPDGKDMQINLTGFLERKTQDFMKELWTLLLSAQNTIGGIPAIFLEQKKEEIRLRMVEEERIQEALMQRRAEFEQQQQQLQLQAQQSRLPHHYQRPQPTQHTQPQSQQHTQQQPSQHVPTPMDTSAAQNSDANKARDADDKRGDDRRPRSSKSDDRSRRRSSRSPRRRSPERRRDRSGSRTRSRSRSRDRKRSDRSRSRERERDRRRSERSRSRDRRRSHRSSRRSRSRSGSRERRRSDRTSGRRSGGDKGGDKGGDKGGDKGGDKGGADERKTRRSGRSASPKGVQAEGGAVVAGDKFEAEVHAEGNAVEEQMVVDTPTADAVV # PASA_UPDATE: g11489.t1, single gene model update, valid-1, status:[pasa:asmbl_1147,status:3], valid-1 NODE_1302_length_12285_cov_51.9336 . gene 3903 6718 . - . ID=g11489;Name=g11489.t1 NODE_1302_length_12285_cov_51.9336 . mRNA 3903 6718 . - . ID=g11489.t1;Parent=g11489;Name=g11489.t1 NODE_1302_length_12285_cov_51.9336 . five_prime_UTR 6367 6718 . - . ID=g11489.t1.utr5p1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 6267 6718 . - . ID=g11489.t1.exon1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 6267 6366 . - 0 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 6017 6075 . - . ID=g11489.t1.exon2;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 6017 6075 . - 2 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 5592 5702 . - . ID=g11489.t1.exon3;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 5592 5702 . - 0 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 5226 5300 . - . ID=g11489.t1.exon4;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 5226 5300 . - 0 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 4962 5064 . - . ID=g11489.t1.exon5;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 4962 5064 . - 0 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 4661 4731 . - . ID=g11489.t1.exon6;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 4661 4731 . - 2 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 4389 4450 . - . ID=g11489.t1.exon7;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 4389 4450 . - 0 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . exon 3903 4062 . - . ID=g11489.t1.exon8;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . CDS 3972 4062 . - 1 ID=cds.g11489.t1;Parent=g11489.t1 NODE_1302_length_12285_cov_51.9336 . three_prime_UTR 3903 3971 . - . ID=g11489.t1.utr3p1;Parent=g11489.t1 #PROT g11489.t1 g11489 MSSELFEALEVDFTSIYGAVGRKVNSEIGTLNGEQRKAMVRNLERDLKEADDLIQQMENELRMQPQPYRQKLQTRVRNYQSDLTKLKKDLRKAANPAVSARDELLGGDDDEGDIENGAAGSRARLLANDARLGRTTERIQNAQRVANESEQIGAAALGDLAHQHETLRRGVTRLQDADANLSKSRRILHAMQWRIVTNKLIMCLVILILAGILGVVVWRKFIA* # ORIGINAL: g11491.t1 original gene structure, not modified by PASA NODE_1302_length_12285_cov_51.9336 AUGUSTUS gene 10010 11751 . - . ID=g11491;Name=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS mRNA 10010 11751 . - . ID=g11491.t1;Parent=g11491;Name=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 11638 11751 . - . ID=g11491.t1.exon1;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 11638 11751 . - 0 ID=cds.g11491.t1;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 11182 11285 . - . ID=g11491.t1.exon2;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 11182 11285 . - 0 ID=cds.g11491.t1;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 10869 10954 . - . ID=g11491.t1.exon3;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 10869 10954 . - 1 ID=cds.g11491.t1;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 10378 10532 . - . ID=g11491.t1.exon4;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 10378 10532 . - 2 ID=cds.g11491.t1;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS exon 10010 10195 . - . ID=g11491.t1.exon5;Parent=g11491.t1 NODE_1302_length_12285_cov_51.9336 AUGUSTUS CDS 10010 10195 . - 0 ID=cds.g11491.t1;Parent=g11491.t1 #PROT g11491.t1 g11491 MSGARKLCFNPPNGLIDLCHYRVSSIKELPLRAFYQMKEVGPNSVKLLLQLKMYEKVSNNFESCEIRIPFFNRGQIVQFDASPTTGSVALGQNRRWLLWNIGQRFAGRNLEAALPATVQFSTPQTASNSNTTAEEKDTLDDDPFCVGQNSYVQLSFKIPDYTMSGCVVDPRSVVLYPAAKAKVTCSREFVSAEYIVWNSLGEARTSVMPQSAFE* # ORIGINAL: g2351.t1 original gene structure, not modified by PASA NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS gene 16069 16812 . + . ID=g2351;Name=g2351.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS mRNA 16069 16812 . + . ID=g2351.t1;Parent=g2351;Name=g2351.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 16069 16812 . + . ID=g2351.t1.exon1;Parent=g2351.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 16069 16812 . + 0 ID=cds.g2351.t1;Parent=g2351.t1 #PROT g2351.t1 g2351 MHGQTATSAVHNHIVIAGNPGLAKIISVTGVVTKDKLIAPCKADIVGKFVGHTTDNVKNLIANAENGILFNLLTRPIHLASTTRNWPAPILQGKLFSDTLLQALDTGKFVCVIAGYYDVLQKCLFNTNAGLRRRFRYWYEIKNPTAEQLNTIFTKKQCQKTISSMQGPSFPANTRRSRHSAATSRDSLSTRFNTADWGVCQMTAAFECEDRPKMLTKANIEAGLAAMKKHKTMDQNVKSRAYLAMFS* # ORIGINAL: g2347.t1 original gene structure, not modified by PASA NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS gene 117 536 . - . ID=g2347;Name=g2347.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS mRNA 117 536 . - . ID=g2347.t1;Parent=g2347;Name=g2347.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 117 536 . - . ID=g2347.t1.exon1;Parent=g2347.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 117 536 . - 0 ID=cds.g2347.t1;Parent=g2347.t1 #PROT g2347.t1 g2347 MASQASARHSTRRNLDIVLFDAAGAADGTPPAVPPSPPLTPAHRAEFAALDLSRTHVPVLKTWCARLSLATTGRKQELIDRLRPSHDRLLDAAQGQRPRTPPDRHLDHPHARGQVTPRIPPVQPPDVGDLPMQGTPTPL* # ORIGINAL: g2349.t1 original gene structure, not modified by PASA NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS gene 5435 6324 . + . ID=g2349;Name=g2349.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS mRNA 5435 6324 . + . ID=g2349.t1;Parent=g2349;Name=g2349.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 5435 5773 . + . ID=g2349.t1.exon1;Parent=g2349.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 5435 5773 . + 0 ID=cds.g2349.t1;Parent=g2349.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 5878 6324 . + . ID=g2349.t1.exon2;Parent=g2349.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 5878 6324 . + 0 ID=cds.g2349.t1;Parent=g2349.t1 #PROT g2349.t1 g2349 MGHNGRACRSGSSCRDSVLVAIIVAALCGPSLVLSETCEVKATLDGDLILSTPPGRAVRVQGASSIRLDGDVYYGGETETLQAKIAALTNQLAALTNQTADLLDRIVQLTGNDGKSDYWWPIRGNASVVAPQSAPLVSKSDGTNTIRVIRRGSLVELRVFLHTDAGYWSTPFPQSGASQIKIDIPMELQPTGDALFGNVRLLHSGAYQSNDVYLWFYLSSKNRPAAQRGLNIYFVKSSDNSYFSMTGIAVGIGFSLFYNLA* # ORIGINAL: g2348.t1 original gene structure, not modified by PASA NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS gene 2789 5029 . - . ID=g2348;Name=g2348.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS mRNA 2789 5029 . - . ID=g2348.t1;Parent=g2348;Name=g2348.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 2789 5029 . - . ID=g2348.t1.exon1;Parent=g2348.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 2789 5029 . - 0 ID=cds.g2348.t1;Parent=g2348.t1 #PROT g2348.t1 g2348 MNGIAGMASATQIAAFALALAHFVSYAEAADYAWAAGQSGGRWDNGSLWLRDPLTPATPLFPCTEQVTNLPILSTVAIGGRARSALVQVSKGAVMQFASGGTLQLRANRPDAPYCSVASRGPSQGPSVSSTLLPLQTYAFVESEWTCKLDLASLFVNSNDGELLVYNVSWTALNASSGSSIRFDAAASVLHVFFPTMGSVRDAGAGNGINLTVAAMTSSPVAALQWTVIRATPSLVVTGMSDVILQYEARKRFQGFGGIHVSTPPGRVLRVRFDIDRIGNGELVGGGINSAFTNPPGGNITWTTAGTQEQVNSVLGNLVFLPNDFQQTATVRVSVSDDGFNDPAAGRLRLYCPNEYNMAPHLRYPGSSVETKDGVFHAGQKFFVDLAAAFTDDDSAQQGDRLTFSIAYVGKDGRSVPLSLAQDIAAWGCQLDAATGLFSGMPAEAGSYQFRATATDLRGSTADAFLNAVVAPSPKKNDGIPDYVITILASVGTVVLTVLSWGLIQITKKLRTRGNRHFNPLAYSVQVNLGMESVGKFASGHDKGGSEGLTFHHNILRIEQLFVDVVRARRGDAGSPVAEMSSEVYDDIDMLYEEASAVVLLSESAQEHFEKMATYGLLLTKAARSIPAIAKSGPLVDFSLCGLRFRVFSGIENAHFEHFRVQIVETMVEIAVSTDPELLEDLSRRRSREEERVVAAGKKRGAAEREGSIIGRNKRAIMKGSESAKTFALDELRYERPSSFNGTSAP* # ORIGINAL: g2350.t1 original gene structure, not modified by PASA NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS gene 9620 12978 . - . ID=g2350;Name=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS mRNA 9620 12978 . - . ID=g2350.t1;Parent=g2350;Name=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 12951 12978 . - . ID=g2350.t1.exon1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 12951 12978 . - 0 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 12148 12557 . - . ID=g2350.t1.exon2;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 12148 12557 . - 2 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 11348 12023 . - . ID=g2350.t1.exon3;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 11348 12023 . - 0 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 11011 11225 . - . ID=g2350.t1.exon4;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 11011 11225 . - 2 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 10755 10869 . - . ID=g2350.t1.exon5;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 10755 10869 . - 0 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 10610 10658 . - . ID=g2350.t1.exon6;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 10610 10658 . - 2 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 10313 10504 . - . ID=g2350.t1.exon7;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 10313 10504 . - 1 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 10101 10234 . - . ID=g2350.t1.exon8;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 10101 10234 . - 1 ID=cds.g2350.t1;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS exon 9620 9996 . - . ID=g2350.t1.exon9;Parent=g2350.t1 NODE_831_length_17217_cov_22.9576_potentialcontaminant AUGUSTUS CDS 9620 9996 . - 2 ID=cds.g2350.t1;Parent=g2350.t1 #PROT g2350.t1 g2350 MERLAIVLLACACNRGVCDDGFFGTGACDCSALLGVGGPNCNTTCDNLPGAQMYGNGCETPCACENGAACHASTGECTCAFGWKGVVCNVIVPPSVPNVNATSEVSDYRVGIRLRWSHDEIGPRAWNTPGWRYEISRTGCFQKVYQVGDALTFLDTDVVINQGYTYYVRAYNSRNVSSAPSAPAGIERLQKAEPPSPPYNVSSTPTLNPDNQQSMIKFTWKEDTSSGPIIKTFIFRDGRLVLEGQTATEYKDRNVVFGKTYVYEIVSVNQNGNSTATRFSETASIGPSDSGSPAASSGNVAGPVAGGIVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSNADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKASDFSSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSLENGWKLSPKAQVIVKVADMGLSRDTAATDYYVAKTRRKLPVKWRVMAPESLEKRIFTHASDAWSFGIVTWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMEACWRKHAETRPQFSQLVLQLRRGMAVLCGTEGGGGGGGGNLGGANATDSITALGQSDAYALTVPEGAYAETVIEAGDGSLHTLQNPIFQKDSISMTGHSSA* # PASA_UPDATE: g4493.t1, single gene model update, valid-1, status:[pasa:asmbl_677,status:12], valid-1 NODE_1181_length_13339_cov_41.3157 . gene 64 2544 . - . ID=g4493;Name=g4493.t1 NODE_1181_length_13339_cov_41.3157 . mRNA 64 2544 . - . ID=g4493.t1;Parent=g4493;Name=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 2170 2544 . - . ID=g4493.t1.exon1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 2170 2544 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 1738 1944 . - . ID=g4493.t1.exon2;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 1738 1944 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 1566 1623 . - . ID=g4493.t1.exon3;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 1566 1623 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 1251 1426 . - . ID=g4493.t1.exon4;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 1251 1426 . - 2 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 1060 1122 . - . ID=g4493.t1.exon5;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 1060 1122 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 797 956 . - . ID=g4493.t1.exon6;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 797 956 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 396 670 . - . ID=g4493.t1.exon7;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 396 670 . - 2 ID=cds.g4493.t1;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . exon 64 222 . - . ID=g4493.t1.exon8;Parent=g4493.t1 NODE_1181_length_13339_cov_41.3157 . CDS 64 222 . - 0 ID=cds.g4493.t1;Parent=g4493.t1 #PROT g4493.t1 g4493 MSYAQPRLESAFSSLPSLTSRATLTSLPLALRDVVVDSRWDSSQQRSKMARLPMRKASAFVYASSREATGLAPRGHQRASLFSSAARRFPSLAREDELPLEDTDKVFAAQWISHSELVLGTKCNKLLYYSTDTRRFLAIPMLRTHRTPVLNRTNCGIHSIAISPSGGFLATGGENPDDVAVYRLPSFEPVALGQAHDDWIFTLTWISETVLVSGSRDGRVMAWDLTEAEESPCASAYDDSEGGMTVALLSPTFCRDEHRAKVRASEHNGWRDQFATLTCDGGLKLWDSSRMECFSTTHMKEYKDTVCMSYDKEHSFYAIGTQSSVVLVEPRAGRGLFQIESLDENWGVRSVSATDVILTIGGGMGRISFFDLRNRKYISVDPLRAEMDEDCARSASASASTFMSPSSSAASVSATHVSAYTAAKEHHQHFLQTGFGWLRKDDNYMNHFQGVPIYNAVYTHAYNESGTKLFVGGGPLQLGLCGSYSAIWQV* # ORIGINAL: g4496.t1 original gene structure, not modified by PASA NODE_1181_length_13339_cov_41.3157 AUGUSTUS gene 8990 10448 . - . ID=g4496;Name=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS mRNA 8990 10448 . - . ID=g4496.t1;Parent=g4496;Name=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 10236 10448 . - . ID=g4496.t1.exon1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 10236 10448 . - 0 ID=cds.g4496.t1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 9924 10121 . - . ID=g4496.t1.exon2;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 9924 10121 . - 0 ID=cds.g4496.t1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 9682 9763 . - . ID=g4496.t1.exon3;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 9682 9763 . - 0 ID=cds.g4496.t1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 9407 9554 . - . ID=g4496.t1.exon4;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 9407 9554 . - 2 ID=cds.g4496.t1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 9159 9287 . - . ID=g4496.t1.exon5;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 9159 9287 . - 1 ID=cds.g4496.t1;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 8990 9047 . - . ID=g4496.t1.exon6;Parent=g4496.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 8990 9047 . - 1 ID=cds.g4496.t1;Parent=g4496.t1 #PROT g4496.t1 g4496 MYAVMMEESLPEIASASDPQWRPCTYTGPDGLRHVRPYYFTMRATVKGRWIGIPLVDVLATEFSVDSRDYYEWAVASGRITVCGAHVEGGHLLANGQTIEHLVHCHEPPVSAEPIRIIADTDDLLVVDKPSTIPASHVHACGQFRFNTVIGVLAVQCPEFTDLKTVHRLDRLTGGILILAKGHDAARRFERKMHAGLVSKEYLCKVSGIFPDGRVECSESIAESWHDQKRCRIAPDGREAFTAFRLVATDGRTSLVQPSTNWKDAPDSCPPGIFG* # ORIGINAL: g4494.t1 original gene structure, not modified by PASA NODE_1181_length_13339_cov_41.3157 AUGUSTUS gene 4245 6419 . + . ID=g4494;Name=g4494.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS mRNA 4245 6419 . + . ID=g4494.t1;Parent=g4494;Name=g4494.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 4245 6419 . + . ID=g4494.t1.exon1;Parent=g4494.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 4245 6419 . + 0 ID=cds.g4494.t1;Parent=g4494.t1 #PROT g4494.t1 g4494 MWESNGRGKRYSKLRMGASVNALPLLILSAVFAVGDAQSMSLLAYSGTCYTAGGTAIIVTWMNEPTTATVNVVSSDTRLATVSTSSLSFTTSNYNTQRTITVSGIGAGTPAIRLSRSTTGVVLATYNLRVLILPTTLLSMYAVAMTKDSSVSLTAVMSSEVMAITPLRLTQTTTSGNAYLIVSPTDVVFDIGSWGTKQSINVICMNYGTVEVRFATTQPTPGVSVAPVVFTASCVGSPLYPILSTSSLLVSDSYSTATVGVRLSGACEAGTVGLAIQSSNTNLFTVSPSQLTFTASNYYVDQTVTVTGVAMGAGSLVVGRGSSGCGVSSVSSTVTVTETTSTGTLPAPITAQMYYDTQRNTFVLTLSWPTPVYTQLQYDIGKCNFNAGQVSGTSYSMDLDPTVIENCEGLWTSSTSYRLLQNTIRVRFKSGGWQLGYVGTLNFLWNFDSATATISAVITGLSPTDLQNAARIPSRLTLFGDETATTAKVTVGSSIYLQHMFTFPAGYTLDFKRISSVLLIGPDGAIVSNLTSSVSDVLNLLSTQSLVAFWVRVGDRPCVSCMIAVMTDLKCTSCPSIGGRRDTATASISAIGVQERDAGEGTTDLAVGLFWVSVGAQSGGTAGSSEGASSMVHAWTLAVGCALSALFAAGVVGLAAFVVHRRALARRAAAAAAAAATAASKADQDHSEAEVQLIRARSIDYIHRDAEHPDHYIISVTGLTGTAV* # ORIGINAL: g4495.t1 original gene structure, not modified by PASA NODE_1181_length_13339_cov_41.3157 AUGUSTUS gene 6562 8207 . - . ID=g4495;Name=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS mRNA 6562 8207 . - . ID=g4495.t1;Parent=g4495;Name=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 8127 8207 . - . ID=g4495.t1.exon1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 8127 8207 . - 0 ID=cds.g4495.t1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 7500 7598 . - . ID=g4495.t1.exon2;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 7500 7598 . - 0 ID=cds.g4495.t1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 7249 7393 . - . ID=g4495.t1.exon3;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 7249 7393 . - 0 ID=cds.g4495.t1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 6998 7114 . - . ID=g4495.t1.exon4;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 6998 7114 . - 2 ID=cds.g4495.t1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 6749 6858 . - . ID=g4495.t1.exon5;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 6749 6858 . - 2 ID=cds.g4495.t1;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 6562 6651 . - . ID=g4495.t1.exon6;Parent=g4495.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 6562 6651 . - 0 ID=cds.g4495.t1;Parent=g4495.t1 #PROT g4495.t1 g4495 MVPIPGPIVSPAWLLRSIRSPGAGNLKVFGHDRVSILDGGLPRWLSEGLATEAGPQAPVKPAVFRPAFRPALVCSMKDVKGALASHSAQIMDARSRERFTGEAAEPRPGLPSGHYPGSRSVPFNTVLTQDKSSFLQPVELRRIFGEAGVDLNKPIVAACGSGLTACVIAFAAETAGAKDIAIYDGSWTEWASHKDSPVEKGPPAAVPLPLSTT* # ORIGINAL: g4497.t1 original gene structure, not modified by PASA NODE_1181_length_13339_cov_41.3157 AUGUSTUS gene 11131 12502 . + . ID=g4497;Name=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS mRNA 11131 12502 . + . ID=g4497.t1;Parent=g4497;Name=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 11131 11133 . + . ID=g4497.t1.exon1;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 11131 11133 . + 0 ID=cds.g4497.t1;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 11322 11647 . + . ID=g4497.t1.exon2;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 11322 11647 . + 0 ID=cds.g4497.t1;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 11730 12083 . + . ID=g4497.t1.exon3;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 11730 12083 . + 1 ID=cds.g4497.t1;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS exon 12169 12502 . + . ID=g4497.t1.exon4;Parent=g4497.t1 NODE_1181_length_13339_cov_41.3157 AUGUSTUS CDS 12169 12502 . + 1 ID=cds.g4497.t1;Parent=g4497.t1 #PROT g4497.t1 g4497 MKRYHSTPRKKSCKEWRPIIERIINDFNVDNYAPTLGDIFGKLCAEGFPFRRTRLHKELKNMGYEQLTPDKRTHRKREQRLRHLRFVFLSKMAILRRDFPNRPIVSVDETKRAGGGRLIIFHGGTKDGFIEGGHFIFKSRKSKGDYHTDGSMNIAKFKKIWERFLEKCPEGCIILLDNAPYHCERVPGTGPLRSNMLKAEIQEWMRSRGIPFEAHHTVAQLKELAGRHELNPIEPGWRSVKAHVAKNNRLLTLKEVEKLTLEAFTRVTKQTWVNCFNYSERQEQRHIKDDGISLGDLYAGPQQLIIQVDDDDDDDLWEYYDDDEEAPLPPGAPEVEFA* # PASA_UPDATE: g6290.t1, single gene model update, valid-1, status:[pasa:asmbl_4176,status:3], valid-1 NODE_2379_length_6494_cov_38.7707 . gene 83 3785 . + . ID=g6290;Name=g6290.t1 NODE_2379_length_6494_cov_38.7707 . mRNA 83 3785 . + . ID=g6290.t1;Parent=g6290;Name=g6290.t1 NODE_2379_length_6494_cov_38.7707 . five_prime_UTR 83 207 . + . ID=g6290.t1.utr5p1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . exon 83 679 . + . ID=g6290.t1.exon1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . CDS 208 679 . + 0 ID=cds.g6290.t1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . exon 897 1139 . + . ID=g6290.t1.exon2;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . CDS 897 1139 . + 2 ID=cds.g6290.t1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . exon 1524 1857 . + . ID=g6290.t1.exon3;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . CDS 1524 1857 . + 2 ID=cds.g6290.t1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . exon 2114 3785 . + . ID=g6290.t1.exon4;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . CDS 2114 3395 . + 1 ID=cds.g6290.t1;Parent=g6290.t1 NODE_2379_length_6494_cov_38.7707 . three_prime_UTR 3396 3785 . + . ID=g6290.t1.utr3p1;Parent=g6290.t1 #PROT g6290.t1 g6290 METPDRIILVMEYASGGELFDYIVARRYLKEPEARRFFRQLLSAVEYCHRNSVIHRDLKPENLLLDADRNIRIIDFGFSNMFYADNTMKTYCGSPFYAAPEMILGNKYVGPEVDIWSMGIILFALLCGHLPFDDSNVKRLYDKIVRGHYMCPENLSPEAKHLLSRMIVTDRTMRATLDEVRMHPWVNEGCDGPPDNHLPLREDFTAPDEEIFQKLLKYEFDAETAKAYLLRAGINPIKATYYLLLEKRERERRAYIEAQAFAANSGALIAIDEEGEGGAQRSRAPMSPRTCQRILIEKQRQQQSAALAAKNAAASAQAASAAAARAALIEKMKMDRRRSQTIAGPQEASNRYQREAMTAMSQATAAYREKKERELRVQIGTSAGEIAIPVGPTTAWANNGQSINTTGVPMTPPASTQALQSASASASTSGGHVVRQPGVASQAQQPPQPERAFTLAAVPSQRRPSIGAVDANAVAQMRMEKDRELQLLREREGLGHASASSNSGNNLVAVTSVTSITSVVSRKESTGSDSGSTFLAVRPQSARRDSIGRDGGTPGQVSAQAAGSLRSPRPSTDGGSSGRNTPRSPKIAVPETPAGLQHPSAQQAAAAAAAAAALEGDGDLGEPSNARRRKRFLSLDGAMQSLLNAFGRRRESTVAGPDGKEAYVGPSGSVDGQRGSNLRTVRGLFNVSTTSSKPAMDIMKEVSRVLTEFKIEHSWRDYTVTCVDAVANPKGQPIRFEIEICKIPKLNLYGLHLKRLGGDTWPYKRLCHRLMSNMQL* # PASA_UPDATE: g6291.t1, single gene model update, valid-1, status:[pasa:asmbl_4175,status:12], valid-1 NODE_2379_length_6494_cov_38.7707 . gene 3912 6340 . - . ID=g6291;Name=g6291.t1 NODE_2379_length_6494_cov_38.7707 . mRNA 3912 6340 . - . ID=g6291.t1;Parent=g6291;Name=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 6305 6340 . - . ID=g6291.t1.exon1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 6305 6340 . - 0 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 5878 5993 . - . ID=g6291.t1.exon2;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 5878 5993 . - 0 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 5700 5754 . - . ID=g6291.t1.exon3;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 5700 5754 . - 1 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 5300 5422 . - . ID=g6291.t1.exon4;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 5300 5422 . - 0 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 4891 4985 . - . ID=g6291.t1.exon5;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 4891 4985 . - 0 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 4533 4639 . - . ID=g6291.t1.exon6;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 4533 4639 . - 1 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . exon 3912 4162 . - . ID=g6291.t1.exon7;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . CDS 4053 4162 . - 2 ID=cds.g6291.t1;Parent=g6291.t1 NODE_2379_length_6494_cov_38.7707 . three_prime_UTR 3912 4052 . - . ID=g6291.t1.utr3p1;Parent=g6291.t1 #PROT g6291.t1 g6291 MDFLISTHPAAKVLRDNIVFKIVPMLNPDGVYVGNYRCSIMGYDLNRHWHEPSSWYHPSIVATKALLAEYKSDPKVQVDFYIDIHAHSTMMNGFMYGNTTDDGEVLEQQEVFPRLLFGNARDFSLANTSFDADQVKAGTGRRHLSEYLSSDCNCYTLEVSFYSYATGGVKMPYTEDAYMELGKNVALTFVDYYKLNNLCQKAPAVEPTRSTRM* # PASA_UPDATE: g6180.t1, single gene model update, valid-1, status:[pasa:asmbl_7027,status:12], valid-1 NODE_4150_length_2118_cov_30.4366 . gene 130 1970 . - . ID=g6180;Name=g6180.t1 NODE_4150_length_2118_cov_30.4366 . mRNA 130 1970 . - . ID=g6180.t1;Parent=g6180;Name=g6180.t1 NODE_4150_length_2118_cov_30.4366 . five_prime_UTR 1970 1970 . - . ID=g6180.t1.utr5p1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . exon 1911 1970 . - . ID=g6180.t1.exon1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 1911 1969 . - 0 ID=cds.g6180.t1;Parent=g6180.t1;5_prime_partial=true NODE_4150_length_2118_cov_30.4366 . exon 1583 1613 . - . ID=g6180.t1.exon2;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 1583 1613 . - 1 ID=cds.g6180.t1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . exon 1197 1278 . - . ID=g6180.t1.exon3;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 1197 1278 . - 0 ID=cds.g6180.t1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . exon 827 1008 . - . ID=g6180.t1.exon4;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 827 1008 . - 2 ID=cds.g6180.t1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . exon 544 579 . - . ID=g6180.t1.exon5;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 544 579 . - 0 ID=cds.g6180.t1;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . exon 130 204 . - . ID=g6180.t1.exon6;Parent=g6180.t1 NODE_4150_length_2118_cov_30.4366 . CDS 130 204 . - 0 ID=cds.g6180.t1;Parent=g6180.t1;3_prime_partial=true #PROT g6180.t1 g6180 CWAQAVTSALSDRLSILNKRAWPEVLLAPQVLINCNGGGTCEGGNPASAYSYIHKNGIPDETCQNYIAADGKCAPLGVCETCAPNGTPTGNCTQVSTHPTYYVGDYGSVSGADKMKAEILARGPISCGISVTDKFEAYTGGIYSEWKLLPLINHE # ORIGINAL: g56.t1 original gene structure, not modified by PASA NODE_4582_length_1433_cov_45.3675 AUGUSTUS gene 93 1203 . + . ID=g56;Name=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS mRNA 93 1203 . + . ID=g56.t1;Parent=g56;Name=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS exon 93 249 . + . ID=g56.t1.exon1;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS CDS 93 249 . + 2 ID=cds.g56.t1;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS exon 579 648 . + . ID=g56.t1.exon2;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS CDS 579 648 . + 1 ID=cds.g56.t1;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS exon 893 1037 . + . ID=g56.t1.exon3;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS CDS 893 1037 . + 0 ID=cds.g56.t1;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS exon 1184 1203 . + . ID=g56.t1.exon4;Parent=g56.t1 NODE_4582_length_1433_cov_45.3675 AUGUSTUS CDS 1184 1203 . + 2 ID=cds.g56.t1;Parent=g56.t1 #PROT g56.t1 g56 LRVHIVADDNGENPLLPDSTSTGQLETINHFFKPLGLSFNHEIHYVKLTRLRYGALLQPNINCQPEMVGNGVFDEDCMGEFSGYDGGDGTGINAICEDQDACNGQYCTHGFLAMNPSNPAGCTYGTGMQ* # ORIGINAL: g14031.t1 original gene structure, not modified by PASA NODE_3127_length_4248_cov_33.9111 AUGUSTUS gene 1604 3900 . + . ID=g14031;Name=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS mRNA 1604 3900 . + . ID=g14031.t1;Parent=g14031;Name=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 1604 1644 . + . ID=g14031.t1.exon1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 1604 1644 . + 0 ID=cds.g14031.t1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 2018 2090 . + . ID=g14031.t1.exon2;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 2018 2090 . + 1 ID=cds.g14031.t1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 2824 3012 . + . ID=g14031.t1.exon3;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 2824 3012 . + 0 ID=cds.g14031.t1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 3233 3421 . + . ID=g14031.t1.exon4;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 3233 3421 . + 0 ID=cds.g14031.t1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 3638 3714 . + . ID=g14031.t1.exon5;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 3638 3714 . + 0 ID=cds.g14031.t1;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS exon 3864 3900 . + . ID=g14031.t1.exon6;Parent=g14031.t1 NODE_3127_length_4248_cov_33.9111 AUGUSTUS CDS 3864 3900 . + 1 ID=cds.g14031.t1;Parent=g14031.t1 #PROT g14031.t1 g14031 MTKDNVEKLQADIKSRRELELHRVTKTLLIRRESLFARVWVPVTLVAIMIQCLIIPFQISFPYKSGLPAAFILTYIVDALLYVDIFLRFHWEYVHGKKHITDAKSIRRLYFHGAFRWDLLAVFPFDFIAIGYRGIRLLPVLRVNRLFNFPKIIRYFRLQEADIRVDTGYIRSKMYGLGGLTLTHVLACIWCDVVRNRKRVD* # PASA_UPDATE: g13268.t1, single gene model update, valid-1, status:[pasa:asmbl_8016,status:12], valid-1 NODE_535_length_21631_cov_42.4949 . gene 121 2909 . + . ID=g13268;Name=g13268.t1 NODE_535_length_21631_cov_42.4949 . mRNA 121 2909 . + . ID=g13268.t1;Parent=g13268;Name=g13268.t1 NODE_535_length_21631_cov_42.4949 . exon 121 403 . + . ID=g13268.t1.exon1;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . CDS 121 403 . + 0 ID=cds.g13268.t1;Parent=g13268.t1;5_prime_partial=true NODE_535_length_21631_cov_42.4949 . exon 562 989 . + . ID=g13268.t1.exon2;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . CDS 562 989 . + 2 ID=cds.g13268.t1;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . exon 1153 1997 . + . ID=g13268.t1.exon3;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . CDS 1153 1997 . + 0 ID=cds.g13268.t1;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . exon 2371 2909 . + . ID=g13268.t1.exon4;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . CDS 2371 2536 . + 1 ID=cds.g13268.t1;Parent=g13268.t1 NODE_535_length_21631_cov_42.4949 . three_prime_UTR 2537 2909 . + . ID=g13268.t1.utr3p1;Parent=g13268.t1 #PROT g13268.t1 g13268 GTYSILNGTSAKSVACLDCPFGAFCDKGASIRPRPFYYLHYSAEDVEPIKCPFGYCCDSVASCAISPCKKNRTGLVCSGCPEGQSLSMFFGFCMDTSTCNDAPTYYVSVFLVCCVIVIILFFVATARSGMFKTITQFAYIAELVVTVGTDTQGDIVYSINSIIASSFGLDSASSKDLCILKGMTAAQRVAFDWVPLVILLAVAFVITLLHLLYKWYRHSVKVAQGLIENKPFSAREKVNLGPLFTVVLFVYAPALKTTFQLLQCVELAGDLRLLRAANVVCYSGWQYAVWCLVPIFFSLPVALFFIARRDPNKTSRTTSTMVRIISDAYRPAMVYWESMLFFRRFVLTIAAVFIVDPFSRAFALWALILAIFMSNLVCRPYVRSRDHWAETLLLLDLVLVATIELRSSFIISEGINESRLDNFQSRFNSALAWMEAVMLMLGSACIVLTVGQWIHTYFVTKPLHRKLFRKYSLKVDVEGKVFREGFQTRHMSLGRFIGVPLSKIDAAMRKITHGGSPVSGVDPDSGSEYDSDGNFSIAPSTTESPASSRAYDFITSPIQEELVDFGTPRSTLT* # ORIGINAL: g13275.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 19334 21444 . + . ID=g13275;Name=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 19334 21444 . + . ID=g13275.t1;Parent=g13275;Name=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 19334 19448 . + . ID=g13275.t1.exon1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 19334 19448 . + 0 ID=cds.g13275.t1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 19713 19848 . + . ID=g13275.t1.exon2;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 19713 19848 . + 2 ID=cds.g13275.t1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 20171 20252 . + . ID=g13275.t1.exon3;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 20171 20252 . + 1 ID=cds.g13275.t1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 20509 20581 . + . ID=g13275.t1.exon4;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 20509 20581 . + 0 ID=cds.g13275.t1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 20904 21003 . + . ID=g13275.t1.exon5;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 20904 21003 . + 2 ID=cds.g13275.t1;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 21307 21444 . + . ID=g13275.t1.exon6;Parent=g13275.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 21307 21444 . + 1 ID=cds.g13275.t1;Parent=g13275.t1 #PROT g13275.t1 g13275 MAAPRQTPLTCSGHTRPVVDLAFSPITPDGFFIISACKDGKPMLRHGQTGDWIGTFEGHKGAVWCARLNAPATRALTGAADFTAKLWDAVSGNELHTFVHKHIVRTADFSKDGARIVTGSMEKIIRIFDADKTDAEPQLIPNLPSNPRQVLFSADGSLIICATEDKTVRVYDARTLSEVRSLVFDSPVTSIEISRDEKTLTMAHGKTVSFWKAD # PASA_UPDATE: g13271.t1, single gene model update, valid-1, status:[pasa:asmbl_8017,status:3], valid-1 NODE_535_length_21631_cov_42.4949 . gene 8601 11860 . + . ID=g13271;Name=g13271.t1 NODE_535_length_21631_cov_42.4949 . mRNA 8601 11860 . + . ID=g13271.t1;Parent=g13271;Name=g13271.t1 NODE_535_length_21631_cov_42.4949 . five_prime_UTR 8601 8838 . + . ID=g13271.t1.utr5p1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 8601 8845 . + . ID=g13271.t1.exon1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 8839 8845 . + 0 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 9098 9165 . + . ID=g13271.t1.exon2;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 9098 9165 . + 2 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 9424 9703 . + . ID=g13271.t1.exon3;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 9424 9703 . + 0 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 10009 10272 . + . ID=g13271.t1.exon4;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 10009 10272 . + 2 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 10481 11064 . + . ID=g13271.t1.exon5;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 10481 11064 . + 2 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 11238 11355 . + . ID=g13271.t1.exon6;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 11238 11355 . + 0 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . exon 11529 11860 . + . ID=g13271.t1.exon7;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . CDS 11529 11644 . + 2 ID=cds.g13271.t1;Parent=g13271.t1 NODE_535_length_21631_cov_42.4949 . three_prime_UTR 11645 11860 . + . ID=g13271.t1.utr3p1;Parent=g13271.t1 #PROT g13271.t1 g13271 MGVRFLHLIRPFMGVIPEVAQPDRKIQFREKVLWTAVTLFIFLVCCQIPLYGIMSSDSADPFYWLRVILASNRGTLMELGISPIVTSGMIMQLLAGAKIIEVDNSVKEDRALFNGAQKLFGMAITVGQAVVYVMTGMYGDPADLGAGICLIIVVQLFFAGLIVMLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATFNSGRGTEFEGAVIALFHLLATRTDKVRALKEAFYRQNLPNLLNLVATIAVFAIVIYFQGFRVDIPIKSNKMRGATQSYPIKLFYTSNIPIILQTALVSNLFFISQMLWSKFKGNFLVNFLGVWKDVEAQGGYNRSYPISGLCYYLSPPASMGAIREDPVHAVLYILFILSTCALFSKTWIEVSGSSARDVAKQLQEQQMVIVGYRESSMVKELNRYIPTAAAFGGLCIGALSIIADFLGAIGSGTGILLAVTIIYQYFEIFVKEQADMGGMSTLIF* # ORIGINAL: g13269.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 3443 5958 . - . ID=g13269;Name=g13269.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 3443 5958 . - . ID=g13269.t1;Parent=g13269;Name=g13269.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 3623 5958 . - . ID=g13269.t1.exon1;Parent=g13269.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 3623 5958 . - 0 ID=cds.g13269.t1;Parent=g13269.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 3443 3494 . - . ID=g13269.t1.exon2;Parent=g13269.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 3443 3494 . - 1 ID=cds.g13269.t1;Parent=g13269.t1 #PROT g13269.t1 g13269 MARNLFEDPFEIPLHEPDRLPYLPKRELTEVLRLSIITYTQLQVIRSEPAEGSVTEWTRALDETDCRMREQISAAVAAITGEVDDQDYDGVVETSMWDPVWLQLYAVVISMNCSTQARALCDLMSCFHVLRYPDFASENVRERLEEDAVLHLQFFRCVNSDFRPLSAIATCAVVEVGGGGGIGNGVERLSAGIESMLSMSTAIDGVRPIPDALALRIIRAVGVTVTGELSWPWIAIDRASAKAKVTLAAGKGARFRSSLERAHMRATAALGSLLVASQQQMTPTATAIGESVPRRGKYSVAADLVRIVAWSDGKAWIESDGGDAEAFFRTLRRVLDKKRCAADLCCRSNCVCEVRRAFVEMCAGRLCVESNAASFLVRVGGVVSNHKHRLAPIVTEAAKCIAVASRASPLSWFLLKSFEAACCVISELVRLNSTVEVAPVEAKPGKRKGSVGATRKQPIPTTTTTTTTTATTTTTVTDPHSIQRGTFAPAEAELLTLGLGSGLCARLSTLAGDPLREYEARERAFKFQYSAKVTNAHAANTAFHGKKLSMEDDQAQVGSDWPSLVSNGCLIAYTCYRALAATIRADQRIISRKDLENPLNTCRLIRIALRHLAATFMSRDPEAGVLVAQFLVDVISTSGGFLGISRPLSDIMTVSTPTLHPPEIDSEFPDDLNNTFTILSTLAFKNVPMDGMPTEPRGEVDFMTIWCMCRLQTMGVKCQCDRCQAGVSAQSKWELRSLHAHGFGEMDVSMLISRNRNRILAAVYCGECNKEGRCFTESSPGRGTIGIDASKATPA* # ORIGINAL: g13272.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 12573 13417 . + . ID=g13272;Name=g13272.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 12573 13417 . + . ID=g13272.t1;Parent=g13272;Name=g13272.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 12573 12707 . + . ID=g13272.t1.exon1;Parent=g13272.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 12573 12707 . + 0 ID=cds.g13272.t1;Parent=g13272.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 12794 13417 . + . ID=g13272.t1.exon2;Parent=g13272.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 12794 13417 . + 0 ID=cds.g13272.t1;Parent=g13272.t1 #PROT g13272.t1 g13272 MMTVERVIADIATDNGVTILYASEAGSRAWGYNGPNSDYDVRIVFAWDVRKYLRLLRQNNQNAIEWILTDTLYVDHRGFRSQCLAILSASVASKPLAYCYRGNILSMGILDASMSHKPAGNKKAVDGTPKKFLQLARLTACLHWHLKHPNAPATSFMLNVNRLMEEPVLDAVKDFVALKAAGTVADVSDTDHARMLKAWAMRALEDFAEKKGELCEKRPPDADYDALSSMHIMGCTAGAGSLEQGFSILSVT* # ORIGINAL: g13274.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 17644 18513 . - . ID=g13274;Name=g13274.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 17644 18513 . - . ID=g13274.t1;Parent=g13274;Name=g13274.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 18140 18513 . - . ID=g13274.t1.exon1;Parent=g13274.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 18140 18513 . - 0 ID=cds.g13274.t1;Parent=g13274.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 17644 18007 . - . ID=g13274.t1.exon2;Parent=g13274.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 17644 18007 . - 1 ID=cds.g13274.t1;Parent=g13274.t1 #PROT g13274.t1 g13274 MSGKVSMRKGDNTKKAPKHKNSYAYKHNKNSRLTKEILALPNYGLCNHCHEVIEWRKKYRKYKPLTVPKKCIKCGEKGVKAAYHEICDPCSNSLKVCAKCGLAKELVPKTTTTPQEANDEQNKLRNMLKALTERERRSFLRSLDKKKDAAAEAGVDAPTMAEVEQMVKDFGNRKAGDDDDFGDLDDLDDSGDEMDGDDLDGGEGGQEASGAADANADGQSGDDLEDEDEDEDKEEEEEEEEREES* # ORIGINAL: g13273.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 14423 17077 . + . ID=g13273;Name=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 14423 17077 . + . ID=g13273.t1;Parent=g13273;Name=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 14423 14553 . + . ID=g13273.t1.exon1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 14423 14553 . + 0 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 14703 14830 . + . ID=g13273.t1.exon2;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 14703 14830 . + 1 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 15042 15122 . + . ID=g13273.t1.exon3;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 15042 15122 . + 2 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 15409 15463 . + . ID=g13273.t1.exon4;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 15409 15463 . + 2 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 15773 15851 . + . ID=g13273.t1.exon5;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 15773 15851 . + 1 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 16081 16178 . + . ID=g13273.t1.exon6;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 16081 16178 . + 0 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 16522 16647 . + . ID=g13273.t1.exon7;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 16522 16647 . + 1 ID=cds.g13273.t1;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 16987 17077 . + . ID=g13273.t1.exon8;Parent=g13273.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 16987 17077 . + 1 ID=cds.g13273.t1;Parent=g13273.t1 #PROT g13273.t1 g13273 MATAKYGSLFQAAAHAKVYATFRPSYPKDLYEAIAGFIRATPAGNFNRAIDIACGSGQGTVPLASYFDDVRGVDISAEQVANATQHPKVKYMVGAAETVELSSGSVDLITVAQGAHWFDLPKFFAECDRLLAPNGSIAIYGYGNCILQNYGATHHVMEFCDKTLGPYWADRRAMVDNAYRDIHIPYKNTTKYFSHISRTMTVQDFGGYLGTWSAYQTMKAKTGEDPLPGVISKVMAELGESNTETAIVQVTWPLFALLGKKD* # ORIGINAL: g13270.t1 original gene structure, not modified by PASA NODE_535_length_21631_cov_42.4949 AUGUSTUS gene 6512 8138 . + . ID=g13270;Name=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS mRNA 6512 8138 . + . ID=g13270.t1;Parent=g13270;Name=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 6512 6609 . + . ID=g13270.t1.exon1;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 6512 6609 . + 0 ID=cds.g13270.t1;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 6863 6932 . + . ID=g13270.t1.exon2;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 6863 6932 . + 1 ID=cds.g13270.t1;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 7196 7312 . + . ID=g13270.t1.exon3;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 7196 7312 . + 0 ID=cds.g13270.t1;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 7516 7608 . + . ID=g13270.t1.exon4;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 7516 7608 . + 0 ID=cds.g13270.t1;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS exon 7794 8138 . + . ID=g13270.t1.exon5;Parent=g13270.t1 NODE_535_length_21631_cov_42.4949 AUGUSTUS CDS 7794 8138 . + 0 ID=cds.g13270.t1;Parent=g13270.t1 #PROT g13270.t1 g13270 MLSLFRFQDTWDRWRLESSDFQLYGACSFAVIFGTWAIGVIPYTILDEMDFAFVRKYKIANTPPTRALKLLAAKMVAINFSCLILPLTLISYPALLAVFFVTDDIWFYAYHRFLHTRPSLYKAYHKPHHVFTAPFAMVSHATHPAEMSLQMLGSIPGILLVRPHLVTFWAWLFVRQLTGIEDHTGYAFPFSLSHLIPTIGGSEFHFDHHNKNVGNYASLFPVLDDVFGTRIPASNRQPKK* # PASA_UPDATE: g11460.t1, single gene model update, valid-1, status:[pasa:asmbl_1536,status:3], valid-1 NODE_141_length_35482_cov_41.8679 . gene 12448 14158 . - . ID=g11460;Name=g11460.t1 NODE_141_length_35482_cov_41.8679 . mRNA 12448 14158 . - . ID=g11460.t1;Parent=g11460;Name=g11460.t1 NODE_141_length_35482_cov_41.8679 . five_prime_UTR 14084 14158 . - . ID=g11460.t1.utr5p1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . exon 14007 14158 . - . ID=g11460.t1.exon1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . CDS 14007 14083 . - 0 ID=cds.g11460.t1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . exon 13630 13892 . - . ID=g11460.t1.exon2;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . CDS 13630 13892 . - 1 ID=cds.g11460.t1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . exon 13351 13466 . - . ID=g11460.t1.exon3;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . CDS 13351 13466 . - 2 ID=cds.g11460.t1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . exon 13036 13148 . - . ID=g11460.t1.exon4;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . CDS 13036 13148 . - 0 ID=cds.g11460.t1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . exon 12448 12692 . - . ID=g11460.t1.exon5;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . CDS 12566 12692 . - 1 ID=cds.g11460.t1;Parent=g11460.t1 NODE_141_length_35482_cov_41.8679 . three_prime_UTR 12448 12565 . - . ID=g11460.t1.utr3p1;Parent=g11460.t1 #PROT g11460.t1 g11460 MTFFHFVNCAALTYAPFYIFYKTTKLSEYDARSGCIRAGLVYLATQVLKFVILATIFSSSPTVNTDWEHADASLYDSLLHVAIDLVDIVGMYYAVGSTRTSGPGDLKVLIVGLGWAAGEAVVTLLLPLWVGARSDEFDWKFIRMGLDANLRLIHHIGVAALLWLWARNDRSKGLIPFLIALSQVRHVLVGYASASVGLGAWTFLAARAATTFALSGVSAILVKSHFAHKQQ* # ORIGINAL: g11461.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 15103 18501 . + . ID=g11461;Name=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 15103 18501 . + . ID=g11461.t1;Parent=g11461;Name=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 15103 15259 . + . ID=g11461.t1.exon1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 15103 15259 . + 0 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 15488 15652 . + . ID=g11461.t1.exon2;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 15488 15652 . + 2 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 16155 16328 . + . ID=g11461.t1.exon3;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 16155 16328 . + 2 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 16600 16709 . + . ID=g11461.t1.exon4;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 16600 16709 . + 2 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 16832 16942 . + . ID=g11461.t1.exon5;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 16832 16942 . + 0 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 17193 17313 . + . ID=g11461.t1.exon6;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 17193 17313 . + 0 ID=cds.g11461.t1;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 17738 18501 . + . ID=g11461.t1.exon7;Parent=g11461.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 17738 18501 . + 2 ID=cds.g11461.t1;Parent=g11461.t1 #PROT g11461.t1 g11461 MPEQGVPLTPDGNLLTTQEIVRLARLFVDQGVNKIRLTGGEPTVRKDLLDLVGELGKIKGLTTIGMTSNGIALARKLPELRARGLNSLNVSLDTLVPAKFEFITRRKGWDKVMESVDVAVRNGFDPVKLNCVVMRGFNDDEIADFVSLTIDKPIDVRFIEYMPFDGNKWDHGKMVPYAEMIEKISAKHLLERLQDGPNDTSKAFRVPGAKGQVGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNSEVSLRDAMRSGIDESALLSLVAAAVGRKKAQHADTIADTSISISACDVVSHVPRSRPGARRTPRPLAGMHAPAPMSRRSTRIGSAAVTVYAGYAAYTTMSSPASSIATTRPLSATADGPDAPYPPPRLTHVDATSGKAHMVDVGDKAETERTAVARGRVVVGGHVARLLAENSLKKGDALSVAQIAGIMGAKQTASLIPLCHTLHLSKVDVRATLDEEGGVVNVEAFVRTRGQTGVEMEALTAVSVAALTVYDMCKAVTKDMRIEDIHLVSKTGGKSGDYVAPQTPK* # PASA_UPDATE: g11463.t1, single gene model update, valid-1, status:[pasa:asmbl_1533,status:3], valid-1 NODE_141_length_35482_cov_41.8679 . gene 20400 21828 . + . ID=g11463;Name=g11463.t1 NODE_141_length_35482_cov_41.8679 . mRNA 20400 21828 . + . ID=g11463.t1;Parent=g11463;Name=g11463.t1 NODE_141_length_35482_cov_41.8679 . five_prime_UTR 20400 20486 . + . ID=g11463.t1.utr5p1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . exon 20400 20657 . + . ID=g11463.t1.exon1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . CDS 20487 20657 . + 0 ID=cds.g11463.t1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . exon 20758 21047 . + . ID=g11463.t1.exon2;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . CDS 20758 21047 . + 0 ID=cds.g11463.t1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . exon 21226 21240 . + . ID=g11463.t1.exon3;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . CDS 21226 21240 . + 1 ID=cds.g11463.t1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . exon 21520 21828 . + . ID=g11463.t1.exon4;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . CDS 21520 21532 . + 1 ID=cds.g11463.t1;Parent=g11463.t1 NODE_141_length_35482_cov_41.8679 . three_prime_UTR 21533 21828 . + . ID=g11463.t1.utr3p1;Parent=g11463.t1 #PROT g11463.t1 g11463 MPPDWLREEADYDLDVLAASELKTFHRSEPKTRVDYVYHKVVPGDTLMGLSIKYGVAVEHVTRANKLWSQDNLISRKLLFIPRKNCAAKLIDDAASTAAESEDFTSGPDPRNRHRASSEKGPAATSALSFLAAIDSRTQQAKTTIDEITRSASVGSRPSKRP* # PASA_UPDATE: g11465.t1, single gene model update, valid-1, status:[pasa:asmbl_1535,status:3], valid-1 NODE_141_length_35482_cov_41.8679 . gene 25101 27551 . + . ID=g11465;Name=g11465.t1 NODE_141_length_35482_cov_41.8679 . mRNA 25101 27551 . + . ID=g11465.t1;Parent=g11465;Name=g11465.t1 NODE_141_length_35482_cov_41.8679 . five_prime_UTR 25101 25163 . + . ID=g11465.t1.utr5p1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . five_prime_UTR 25281 25304 . + . ID=g11465.t1.utr5p2;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 25101 25163 . + . ID=g11465.t1.exon1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 25281 25312 . + . ID=g11465.t1.exon2;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . CDS 25305 25312 . + 0 ID=cds.g11465.t1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 25453 25742 . + . ID=g11465.t1.exon3;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . CDS 25453 25742 . + 1 ID=cds.g11465.t1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 25884 26061 . + . ID=g11465.t1.exon4;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . CDS 25884 26061 . + 2 ID=cds.g11465.t1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 26263 26851 . + . ID=g11465.t1.exon5;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . CDS 26263 26851 . + 1 ID=cds.g11465.t1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . exon 27015 27551 . + . ID=g11465.t1.exon6;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . CDS 27015 27305 . + 0 ID=cds.g11465.t1;Parent=g11465.t1 NODE_141_length_35482_cov_41.8679 . three_prime_UTR 27306 27551 . + . ID=g11465.t1.utr3p1;Parent=g11465.t1 #PROT g11465.t1 g11465 MADRGVVRSSKFRHVFGTPAKKEKCFDGFRITRNAWDSNYCAVNPKFIAVVLEAGGGGAFAVVPGDKEGIRVDANVPKVTGHKGAVLDIAWNPFNDNVIASCSDDCTVKVWVIPDGGLTEELTVASVELIGHDRKVGQVLWHPTAENVLASSAFDFLIKLWNVGTGEVIRTISGHTDTIYTMSWSFDGSLLATSSKDKKLRVFDPHTGAVKQEAVSHDGSKASRAVFLTGNRIFTTGFSKNSERQYGVWNASDLSSPLKIENIDTASGVLFPFYDPDTSVVYVAGKGDGNIRYFEIVEEAPWAHFLTEFKSNAPQRGLGYMPKRGLNVLSCEVARFYKLHASGLCEPIAMTVPRKSDHFQEDLFPLTAAYEPSLSAADFIAGKNAPPKTFSLRDGAQVQAAKAFTSSAPKPSDAPKASATSSGKTVAQLEREIAELKLENQKLREELAKHQ* # PASA_UPDATE: g11464.t1, single gene model update, valid-1, status:[pasa:asmbl_1537,status:3], valid-1 NODE_141_length_35482_cov_41.8679 . gene 22125 24405 . - . ID=g11464;Name=g11464.t1 NODE_141_length_35482_cov_41.8679 . mRNA 22125 24405 . - . ID=g11464.t1;Parent=g11464;Name=g11464.t1 NODE_141_length_35482_cov_41.8679 . five_prime_UTR 24326 24405 . - . ID=g11464.t1.utr5p1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 24278 24405 . - . ID=g11464.t1.exon1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 24278 24325 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 23992 24135 . - . ID=g11464.t1.exon2;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 23992 24135 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 23705 23824 . - . ID=g11464.t1.exon3;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 23705 23824 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 23451 23594 . - . ID=g11464.t1.exon4;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 23451 23594 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 23259 23331 . - . ID=g11464.t1.exon5;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 23259 23331 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 23028 23062 . - . ID=g11464.t1.exon6;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 23028 23062 . - 2 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 22810 22926 . - . ID=g11464.t1.exon7;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 22810 22926 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 22487 22570 . - . ID=g11464.t1.exon8;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 22487 22570 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . exon 22125 22282 . - . ID=g11464.t1.exon9;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . CDS 22163 22282 . - 0 ID=cds.g11464.t1;Parent=g11464.t1 NODE_141_length_35482_cov_41.8679 . three_prime_UTR 22125 22162 . - . ID=g11464.t1.utr3p1;Parent=g11464.t1 #PROT g11464.t1 g11464 MEERVQLELRGRDPSTITHLFLDGCRTSKMEGITEAFSSLKELSMVNCGINSLEGFPTLPLLKKLALSDNRIAGGLENLAGCPALATLLLANNKIKDFSALEALRQLPNLHKIDLVNCEVTDIPDLEDRLLKMVPSLTRVVCDSNNDDDESESEEDDDDDDDDDEDDDDDDDEEGEDESDEEDDSAAVGEGEEEGEGEGDDDQEEEEEEEEEDVDDEDEAGDNEAEQDDDDDDEDEDDDEAEPSALAELQKEDLEDDEGEFEVGENEEPSDEEIQSDADLDEEDEPQRKRPRMA* # ORIGINAL: g11467.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 32724 34256 . + . ID=g11467;Name=g11467.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 32724 34256 . + . ID=g11467.t1;Parent=g11467;Name=g11467.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 32724 34256 . + . ID=g11467.t1.exon1;Parent=g11467.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 32724 34256 . + 0 ID=cds.g11467.t1;Parent=g11467.t1 #PROT g11467.t1 g11467 MLRLAARLGAVYSFALRALSSRLLRILWGDRRSGQFDKVLRRLSLATVVFFILYKVTMFDDCLHEAGHVALRLFPHDINSRRCEICPWLVGGPCTTSRLTMPGVDCYCDCFSMSLHSSKASPLFAEPPQRPIVPNTVRAKTQILFYNSFEMYSSQMERSYIALFEASRVHPEIDAVMWGPGFRHYDSTYTLSDNVQRRYGGKDHFDLVVICPFNIDRLSVYDLAVADIAPHSPILYRAHECRYAVCYGNFVLTKASILMFAYAVEVDQYRSLERTSLLLHSPHVVDTSVFHADVASQRTVDVLLPGNPGSNYPFRRRLRDLIFDGRLPGTLVRKHPGYRLQGATSEDAEGSIKFVNVVNEQYDEYARSLKQAKIVLVTSSMYRYAVLKYAEAAVAGALIIGDIPSERGSDFRRFVVEIRRTDTDEQIERTIKFWLDRPEERVARALIGQEYFLRRVAPKNAVDLMLWSLSVYQRGLRGSFVGTEIEPGYRMQCWPLQAERTYCKLTGCDK* # ORIGINAL: g11466.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 27799 32126 . - . ID=g11466;Name=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 27799 32126 . - . ID=g11466.t1;Parent=g11466;Name=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 32111 32126 . - . ID=g11466.t1.exon1;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 32111 32126 . - 0 ID=cds.g11466.t1;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 31748 31910 . - . ID=g11466.t1.exon2;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 31748 31910 . - 2 ID=cds.g11466.t1;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 31256 31624 . - . ID=g11466.t1.exon3;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 31256 31624 . - 1 ID=cds.g11466.t1;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 28661 31005 . - . ID=g11466.t1.exon4;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 28661 31005 . - 1 ID=cds.g11466.t1;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 27799 28466 . - . ID=g11466.t1.exon5;Parent=g11466.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 27799 28466 . - 2 ID=cds.g11466.t1;Parent=g11466.t1 #PROT g11466.t1 g11466 MAGKHGMPVGSGSAVDAVARRFRGALRSVLAMFNALFVLVLGKQRNATTRSTQTPVPKRSTSFDFSGVVHASSSIIRSFPTVVHILKWRALQHPDKPTHTFLGDDGAVVDRLNFAEMDLEARKVAGLLQSTPAFKTGDRVILAYPPGLDFVVAFWGCLYAGAIAVPVYPPNPQTLAKDMHKFRKVAEDSGARVVLTSHMYNLATGVGTIRQSILGGGVRWPASLQWLTTDALPDALAGSYAPTDVSRTDIAFFQYTSGSTSDPKAVMVSHGNIMGQMLTWDSIRPDNVLVSWLPSYHDMGLVGYIIVPMVAAAHVVQFSPISFIKNPFLWVQTISKYGGTHTCAPNFAYALTARKTTDAQRDTLELSQWTSAICASEPIRPEALDAFVDRFSPVGFRADAFNCGYGLAEVTLTCTRQDPLNPAPFIVLHVDKKALEMEKLVKDVDVGSAALKDVVRLVGCGKSCPDQAVVIVDPDTHERVGEDGVGEIWVSGSSNAHGYWKRPEQTELMFRARIKGDPTETLHLRTGDLGFMRGGELYVTGRIKDIIIVRGRNILPQDIELTVEQASDKVRPGCVAAFSIEKDGNERVVVAAELREVELPAAHAEIVRAVQDAVFAEHQLACYAICLLRPRCVPKTTSGKIQRHGARSQYLAGTLRAQFTQTFDFQRDDDAQSTASSGDARGELPPAADIERWLLRKIAPRVSAADANATWAALGMDSIALVGLAADLGNWLGVVVPPSAFFERTTVRALASFVASGGCASAAVGTDGVSASSDRFAQLEPGQEVPREYFEVEEFPEYVGLRRQKAQLEEAGISIPYLTILNAQDRRSRLNFNTYNYLGLAGHPEVVEASKRAIDEYGTSMCSSPIVGQTQLNVDLEDEIAAFLGVESAVVFVGGHSANVTTIGHLVGPQDLILCDALNHNSIVMGQRLSRATVVPFPHNDWQQAERILASVRHKYRRVLIVIEGVYSMDGDIPNLPEFVSMKRKHGAMLYVDEAHSIGVLGRTGRGLAEYHGVDPTAVDVWMGTLSKALGSCGGYIAGSKALVEYLKFTCPGFVFSVGMTPSNAAAALESLRIAVREPVRVSDLAEHSRLFLSLARERGMNVGRSHDSPVVPVIIGDTQRCAQAAEMMAKRGIDVKPIIYPAVEENQARLRFFLSQTHTVDDIRRAIDVLTDIGRELGFANPVER* # ORIGINAL: g11459.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 8293 10812 . - . ID=g11459;Name=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 8293 10812 . - . ID=g11459.t1;Parent=g11459;Name=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 10671 10812 . - . ID=g11459.t1.exon1;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 10671 10812 . - 0 ID=cds.g11459.t1;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 10293 10524 . - . ID=g11459.t1.exon2;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 10293 10524 . - 2 ID=cds.g11459.t1;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 9273 9945 . - . ID=g11459.t1.exon3;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 9273 9945 . - 1 ID=cds.g11459.t1;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 8293 9003 . - . ID=g11459.t1.exon4;Parent=g11459.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 8293 9003 . - 0 ID=cds.g11459.t1;Parent=g11459.t1 #PROT g11459.t1 g11459 MDFLATEVEVPPHVMPLLAGAAVFGVAKYALDQALEYCRPKPPSPETDDRLIYLEEHSSMIEVHGKWLRLFRIVHDSPEAPTLFFFHGAGGQAQQWKEQIEFFRGRANMIAVDFVGHGLSDKPRKISLYSYDSLVLDAVEVFNRYKGQCNVIFAHSYGTAIALGMYPTIKSDVSALALFSLTIDTGHKPHVNPAVLRLPDSVLDVLRTLDRRGGVDSTSVRRMLSPHARVELKRRQLVWNAHTPSHVVKALSLQIRRPTESEFAALTCPVLMISGVDDKLTPPDNVARAHALLPPASHEPYVIPECGHQPMLEKRELVNALANRFLIEVAGIEPLSRLHRLNRGDSVDAKWSVKNFEKWRRLDSFGRTIGAKGFIPMKVPRQDDPDHSPVAFLERHPTVSCIIDVSSDTPPYLPLGWRTNDRPVRYTKIATVSKVVPSIESVCEFIRSSEAHWKSDEGKGTNIAVHCHYGYNRTGFFICSHLIEVDGMPVADAIAEFAAARPPGIRHQHFIDELFLRYSNVTDIAQLQDADAETAHPSGEPSSSSSHDGPTGTIHAADTDGDAADGGRKRARFAVPLETNTSQPH* # ORIGINAL: g11462.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 19093 20022 . - . ID=g11462;Name=g11462.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 19093 20022 . - . ID=g11462.t1;Parent=g11462;Name=g11462.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 19093 20022 . - . ID=g11462.t1.exon1;Parent=g11462.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 19093 20022 . - 0 ID=cds.g11462.t1;Parent=g11462.t1 #PROT g11462.t1 g11462 MRPSGVHWAGTAALAVAALILCCCTVHTAAEFGESSSVGDTGDENAHGAFGSLPLGGADGEDEQPRQGVSDDELREMVARGEIDISLVPWLKERYQGHVHFKRRMSRAHRTFLERRQRSTESSNSNRGESSLEWSVAHPPLMFINEPHWQGKEMPWEEENRVLDEFHNAQCIVDDERDAYHAACFGPDDSFQSCTQECCDAFHSYYAALTTDDCIDGMMDFLPTRQIISKLVAAHNMEIQFHCPHMYHHDPVPAFGEVARRRRAVQEDADRARRQAEENARIARGAPRKIDSPHQFGQTKMETVRIDDL* # ORIGINAL: g11458.t1 original gene structure, not modified by PASA NODE_141_length_35482_cov_41.8679 AUGUSTUS gene 349 7670 . + . ID=g11458;Name=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS mRNA 349 7670 . + . ID=g11458.t1;Parent=g11458;Name=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 349 972 . + . ID=g11458.t1.exon1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 349 972 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 1087 1147 . + . ID=g11458.t1.exon2;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 1087 1147 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 1506 1605 . + . ID=g11458.t1.exon3;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 1506 1605 . + 2 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 1784 2918 . + . ID=g11458.t1.exon4;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 1784 2918 . + 1 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 3145 3477 . + . ID=g11458.t1.exon5;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 3145 3477 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 3923 3991 . + . ID=g11458.t1.exon6;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 3923 3991 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 4215 4348 . + . ID=g11458.t1.exon7;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 4215 4348 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 4558 5091 . + . ID=g11458.t1.exon8;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 4558 5091 . + 1 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 5326 5475 . + . ID=g11458.t1.exon9;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 5326 5475 . + 1 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 5939 6075 . + . ID=g11458.t1.exon10;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 5939 6075 . + 1 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 6289 6440 . + . ID=g11458.t1.exon11;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 6289 6440 . + 2 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 6624 6723 . + . ID=g11458.t1.exon12;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 6624 6723 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 6872 6969 . + . ID=g11458.t1.exon13;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 6872 6969 . + 2 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 7171 7383 . + . ID=g11458.t1.exon14;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 7171 7383 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS exon 7533 7670 . + . ID=g11458.t1.exon15;Parent=g11458.t1 NODE_141_length_35482_cov_41.8679 AUGUSTUS CDS 7533 7670 . + 0 ID=cds.g11458.t1;Parent=g11458.t1 #PROT g11458.t1 g11458 MESPQTVPVASAGESPMEVDMDPSPQNVKACLVEDGSSATHAILTSPTLYAKSTLGVKQTDSIEEERAVSTDGMSVEGADDEGDAVIVRRRVKRRALFDDDDDEPGTQTINHNTAALEDSSARNERNVVNDGNEDDGLISFAEHAAAVKRGEVPLAIDANPVGEQHDNNADASDAAMSNALAEEDASDATADGKHRKRKRRDDGSDKPKKMSKDDMRSLHSETQRLVRESVVSLAVHQPQKKSMADFLTKLKANSTVAAAIAPPPTIPKAEQLKITIARRAPDASIVNALTRKPKLSVDHELGGDDDFIVIAPAGKDAPRQTSATQPRPPQRHVTAGSKGDGTTAAEVPRSRALFSLSGTKKMEDDDSDLVPLSEMHKHTQAAIEDKDAGLNASDPAAKSDESVAGDKIALAAAATKDSALPIAIAVDRARSTPPKAVAQQVARKGAVAGRSAERRNIRVDHQWSPASGTPLKSRQKLYEKLKSAMRTDKERRRLHAELRPPAPEDIPTIGRDDFESDEEEKDGDGGEDDGDDADAMSGADSDGGIPSDEEMDVDNEEEEEEEGEEDESGDEEEEASGDESDGNDDSGTEGSDSSDGDDSDDGSVGVDERAAGAVTSNVVAGDNTDMPAHKSSRPVQPRLTTAEEAHLGRDSTNRTELPLPSAPPAPTSFAGLVPRGIDASLLGTSLVTALAKPVFRDPLAPKKANNIADFFKRPQKPVDVVSVPVPVPVPVPVPAPAPATAETFRAASQKPVASQYGTQRLRELPREPIEDSQDLFGDSFEVAMQNGAMESSTTNGAPGTGFMHLSMEEESQFLDSNGFIKTGAPNPQPRAKAFAAMAAPSDEATKQSVQNASSTQCMATQVLETQSFDDSATPDIAEGILVGIREGLRGVVSVPSRPSGVAQDERRARKEERRRRREEKKLRRMEARAHAKSTKGGDDAGSDGGGDSAERGDSGDVEDGEGSDAMEVDDGGDNVARAIAALPRVRAAMDKKKKRRNFFDMEAEVSGSEVSDDDDDGSDLDGYDDEIIAKHSDEEGDDREMMQAHWRAEMDQDAQAIDAVMKTVIRNRDEYDSEEEGAFARRRRRLGLDHEDSAVDLFAPSSVLGGDYVDPFFCGEDDDENDAAMQARRLEKVKRDNYLRRMQSEGGATTVLDEEHSQDIFSLIRNTCAAKKEVSDVGVNKGPSTVSTAAAAVPHSKPSFFGATDKSVAPPRRMSSFLSRSPRSLSKAVGGNGGATKPVVQTATRNFVFSTTSAAKAAPDATGQSHVGGSSAKTAIDAQVEPARPRAQATSNAAPAGKEGLPAPRTSLFGILSRNRFAAQSSFP* # ORIGINAL: g727.t1 original gene structure, not modified by PASA NODE_2854_length_4952_cov_40.3223 AUGUSTUS gene 280 1326 . - . ID=g727;Name=g727.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS mRNA 280 1326 . - . ID=g727.t1;Parent=g727;Name=g727.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 1188 1326 . - . ID=g727.t1.exon1;Parent=g727.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 1188 1326 . - 0 ID=cds.g727.t1;Parent=g727.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 280 947 . - . ID=g727.t1.exon2;Parent=g727.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 280 947 . - 2 ID=cds.g727.t1;Parent=g727.t1 #PROT g727.t1 g727 MTSLGEIDPDIGLDNFELFHDPLWKSNAKGLTLASTFPDSFAADKSAFKVPQLKVDGTFQGSCADDFSMNTDILYDNTDKYITAPFRLSLTFMTKSTFATDYRALQIAIPMGSSYASPRYFAIGCDSPHSNYTVRYSSAKAVRLDPAPVGGACIPIIADLTALLAADPNAFVVRGPAVQMQPNKRYVISTRFAANEVYMAITVADTSVAPQRIIRVAKLQAILPIPLDKDYPSMPPIRGFGMAAGLSADGNLTCLTDYVMTSLGAVDR* # ORIGINAL: g728.t1 original gene structure, not modified by PASA NODE_2854_length_4952_cov_40.3223 AUGUSTUS gene 2328 4008 . - . ID=g728;Name=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS mRNA 2328 4008 . - . ID=g728.t1;Parent=g728;Name=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 3827 4008 . - . ID=g728.t1.exon1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 3827 4008 . - 0 ID=cds.g728.t1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 3394 3588 . - . ID=g728.t1.exon2;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 3394 3588 . - 1 ID=cds.g728.t1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 3081 3150 . - . ID=g728.t1.exon3;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 3081 3150 . - 1 ID=cds.g728.t1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 2757 2920 . - . ID=g728.t1.exon4;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 2757 2920 . - 0 ID=cds.g728.t1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 2540 2631 . - . ID=g728.t1.exon5;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 2540 2631 . - 1 ID=cds.g728.t1;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS exon 2328 2392 . - . ID=g728.t1.exon6;Parent=g728.t1 NODE_2854_length_4952_cov_40.3223 AUGUSTUS CDS 2328 2392 . - 2 ID=cds.g728.t1;Parent=g728.t1 #PROT g728.t1 g728 MGALEDAVLEHASKWRKPCISRDLFEGDNCLPHALYGSKGETHMKEELNGVLRSLASQGLLHTRSIRGVELFWLNEVAFATKLAQPAPPPSAPILSESVVDSESPPMTSGAPPAVEKDALEPPMKRPRVESIASPESAINVVPDLPLESPTLLPPFKENVPPATGTCTVPATPGEPTPATDDVTQSLRDRLCAISKESQELAADYDEAELKLHIDKLHDYNDIKDLGQMLLGKLAEVQELTTKAMYTKFGLDMED* # PASA_UPDATE: g729.t1, single gene model update, valid-1, status:[pasa:asmbl_5126,status:12], valid-1 NODE_2854_length_4952_cov_40.3223 . gene 4262 4911 . - . ID=g729;Name=g729.t1 NODE_2854_length_4952_cov_40.3223 . mRNA 4262 4911 . - . ID=g729.t1;Parent=g729;Name=g729.t1 NODE_2854_length_4952_cov_40.3223 . five_prime_UTR 4871 4911 . - . ID=g729.t1.utr5p1;Parent=g729.t1 NODE_2854_length_4952_cov_40.3223 . exon 4262 4911 . - . ID=g729.t1.exon1;Parent=g729.t1 NODE_2854_length_4952_cov_40.3223 . CDS 4562 4870 . - 0 ID=cds.g729.t1;Parent=g729.t1 NODE_2854_length_4952_cov_40.3223 . three_prime_UTR 4262 4561 . - . ID=g729.t1.utr3p1;Parent=g729.t1 #PROT g729.t1 g729 MRMPSEDMSSFGSSGPAEAAEYVDQTVSRITALRELTMLVEKTRTSTTSLASASGVVISSSPPKSLLPGRFSLVQRSGSMEGKASEFFARVTLWRFLKESAV* # PASA_UPDATE: g3527.t1, single gene model update, valid-1, status:[pasa:asmbl_6782,status:12], valid-1 NODE_3970_length_2426_cov_22.8422 . gene 82 1957 . - . ID=g3527;Name=g3527.t1 NODE_3970_length_2426_cov_22.8422 . mRNA 82 1957 . - . ID=g3527.t1;Parent=g3527;Name=g3527.t1 NODE_3970_length_2426_cov_22.8422 . exon 1849 1957 . - . ID=g3527.t1.exon1;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 1849 1957 . - 0 ID=cds.g3527.t1;Parent=g3527.t1;5_prime_partial=true NODE_3970_length_2426_cov_22.8422 . exon 1541 1630 . - . ID=g3527.t1.exon2;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 1541 1630 . - 2 ID=cds.g3527.t1;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . exon 1199 1256 . - . ID=g3527.t1.exon3;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 1199 1256 . - 2 ID=cds.g3527.t1;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . exon 938 1032 . - . ID=g3527.t1.exon4;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 938 1032 . - 1 ID=cds.g3527.t1;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . exon 686 787 . - . ID=g3527.t1.exon5;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 686 787 . - 2 ID=cds.g3527.t1;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . exon 82 171 . - . ID=g3527.t1.exon6;Parent=g3527.t1 NODE_3970_length_2426_cov_22.8422 . CDS 82 171 . - 2 ID=cds.g3527.t1;Parent=g3527.t1;3_prime_partial=true #PROT g3527.t1 g3527 ECLCKNGTCDGGISASATGTCVGACKPGAYGDLCDKACTCQNGACNRTTGKCDSCVKNFYGALCDQRCEDKRACACNDGIAGNGSCLLCASPKERYDAKSSPSCGDCLPSFYGADCNKTCVCLNGVCDSGINGTGNCTSCSPRFFGEKCDKNATCQNGYPRMTDGECTACMDGYFGPTCND # ORIGINAL: g2667.t1 original gene structure, not modified by PASA NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS gene 425 975 . - . ID=g2667;Name=g2667.t1 NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS mRNA 425 975 . - . ID=g2667.t1;Parent=g2667;Name=g2667.t1 NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS exon 864 975 . - . ID=g2667.t1.exon1;Parent=g2667.t1 NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS CDS 864 975 . - 0 ID=cds.g2667.t1;Parent=g2667.t1 NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS exon 425 606 . - . ID=g2667.t1.exon2;Parent=g2667.t1 NODE_3250_length_3916_cov_39.7628_potentialcontaminant AUGUSTUS CDS 425 606 . - 2 ID=cds.g2667.t1;Parent=g2667.t1 #PROT g2667.t1 g2667 MFEALLDQELPPCPHCGYFPGTLVVDNCAKVCYDRPKGVSLQDMRGRVPEDFDGHVNIKDFWARVKKAALVYGVAPHLVSEFQLVPSLHESAMMIHPL # ORIGINAL: g7747.t1 original gene structure, not modified by PASA NODE_3671_length_2989_cov_33.0336 AUGUSTUS gene 107 2158 . + . ID=g7747;Name=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS mRNA 107 2158 . + . ID=g7747.t1;Parent=g7747;Name=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS exon 107 179 . + . ID=g7747.t1.exon1;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS CDS 107 179 . + 2 ID=cds.g7747.t1;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS exon 465 600 . + . ID=g7747.t1.exon2;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS CDS 465 600 . + 1 ID=cds.g7747.t1;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS exon 858 995 . + . ID=g7747.t1.exon3;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS CDS 858 995 . + 0 ID=cds.g7747.t1;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS exon 1388 1519 . + . ID=g7747.t1.exon4;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS CDS 1388 1519 . + 0 ID=cds.g7747.t1;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS exon 1967 2158 . + . ID=g7747.t1.exon5;Parent=g7747.t1 NODE_3671_length_2989_cov_33.0336 AUGUSTUS CDS 1967 2158 . + 0 ID=cds.g7747.t1;Parent=g7747.t1 #PROT g7747.t1 g7747 SATMQEFAMAKMPLPAVSDASVVSRGPATAKLHKQIPSEGRARALFAFAPDGIASFGIVFRGTIANNKTVLFYFGCAVGSAPNMCRPVIRCSDNKTINAVGAERPMLSGTWYRVEAIFTPVARTSTVFGLSILSADGFELFSVNTWTFPVRLFDIRIDRAGILMGCRTLMCEGVDDVVAASQLRWDGDSSSGVLLPSQFADSFQLNTKSIAGSLTSTSCPTS* # PASA_UPDATE: g11261.t1, single gene model update, valid-1, status:[pasa:asmbl_4724,status:12],[pasa:asmbl_4726,status:12], valid-1 NODE_264_length_28720_cov_56.7274 . gene 16360 19375 . - . ID=g11261;Name=g11261.t1 NODE_264_length_28720_cov_56.7274 . mRNA 16360 19375 . - . ID=g11261.t1;Parent=g11261;Name=g11261.t1 NODE_264_length_28720_cov_56.7274 . five_prime_UTR 19159 19375 . - . ID=g11261.t1.utr5p1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 19072 19375 . - . ID=g11261.t1.exon1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 19072 19158 . - 0 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 18811 18868 . - . ID=g11261.t1.exon2;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 18811 18868 . - 0 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 18434 18493 . - . ID=g11261.t1.exon3;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 18434 18493 . - 2 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 18186 18224 . - . ID=g11261.t1.exon4;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 18186 18224 . - 2 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 17674 17785 . - . ID=g11261.t1.exon5;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 17674 17785 . - 2 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 17123 17333 . - . ID=g11261.t1.exon6;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 17123 17333 . - 1 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . exon 16360 16887 . - . ID=g11261.t1.exon7;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . CDS 16516 16887 . - 0 ID=cds.g11261.t1;Parent=g11261.t1 NODE_264_length_28720_cov_56.7274 . three_prime_UTR 16360 16515 . - . ID=g11261.t1.utr3p1;Parent=g11261.t1 #PROT g11261.t1 g11261 MSSQHGEHSGDHARGHHGHGHDGLPQQPQLTPAEQEALSSCRKQVLMLAGTAAFLGVVAARRLIVPRLPKEGQQLAPFLQAAGGFFGFYAGLSAGRPICESKLLELENSPIADRIRKRQGLAPKGAAAEEFRGDKPSSTSGESDHVTNDAPAENQNSNGWRRLRRQAASAPDVPLIDENAPEVVLDAGEPQSDRAQSSSSSRSARSNSDNSNNNNNNNNSSSNSNNSNNNQEFSNTSQQQQQQQQQQQRRYVTFSELRDRNRRAYGGSMDSGSDGQSGRSSGRAFDDASLDAPRERTAPTGGRANKFGDDME* # PASA_UPDATE: g11258.t1, single gene model update, valid-1, status:[pasa:asmbl_4728,status:12],[pasa:asmbl_4729,status:12], valid-1 NODE_264_length_28720_cov_56.7274 . gene 2971 9908 . + . ID=g11258;Name=g11258.t1 NODE_264_length_28720_cov_56.7274 . mRNA 2971 9908 . + . ID=g11258.t1;Parent=g11258;Name=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 2971 2973 . + . ID=g11258.t1.exon1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 2971 2973 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 3194 3214 . + . ID=g11258.t1.exon2;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 3194 3214 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 3658 3774 . + . ID=g11258.t1.exon3;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 3658 3774 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 3964 4067 . + . ID=g11258.t1.exon4;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 3964 4067 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 4232 4394 . + . ID=g11258.t1.exon5;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 4232 4394 . + 1 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 4760 4936 . + . ID=g11258.t1.exon6;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 4760 4936 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 5171 5336 . + . ID=g11258.t1.exon7;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 5171 5336 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 5621 5891 . + . ID=g11258.t1.exon8;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 5621 5891 . + 2 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 6186 6345 . + . ID=g11258.t1.exon9;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 6186 6345 . + 1 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 6647 6838 . + . ID=g11258.t1.exon10;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 6647 6838 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 7167 7340 . + . ID=g11258.t1.exon11;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 7167 7340 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 7522 7863 . + . ID=g11258.t1.exon12;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 7522 7863 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 8116 8223 . + . ID=g11258.t1.exon13;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 8116 8223 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 8402 8496 . + . ID=g11258.t1.exon14;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 8402 8496 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 8660 9134 . + . ID=g11258.t1.exon15;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 8660 9134 . + 1 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . exon 9269 9908 . + . ID=g11258.t1.exon16;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . CDS 9269 9544 . + 0 ID=cds.g11258.t1;Parent=g11258.t1 NODE_264_length_28720_cov_56.7274 . three_prime_UTR 9545 9908 . + . ID=g11258.t1.utr3p1;Parent=g11258.t1 #PROT g11258.t1 g11258 MPLRLDIKRKLLARSDRVKSVDLHPTEPWMLVSLYIGTIHVWNYENQTMVKSFEVTDLPVRAAKFIGRKNWIIAGADDMQIRVFNYNTLEKVHNFEAHSDYIRAIAVHPTQPYVLTSSDDMMIKLWDWDRNWNCAQVFEGHSHFVMQIVFNPKDTNTFASASLDRTVKVWQLGSSVPNFTLEGHEKGVNCVDYFQGGEKPYLITGGDDRLVKIWDYQTKSCVQTLEGHTQNLSVVCFHPELPIIISGSEDGTVRIWHANTYRLENTLNYGLERVWSLSYLRGSNSVAIGYDEGAIMIKLGREDPVCSMDGSGKIIWAHHNEIQQANLKTVGPEVEINDGERLPLSSKELGSCEVYPQTLIHNPNGRFVVVCGDGEYTIYTALAWRNKSYGSALEFVWSSDSSEYAVRESSSKIKTFRNFKERKVLRHDFGAEGIFGGALLGVRSSNFLALYDWESLELVRRIETVPKYIFWSEDGLLMTIAAEESFFVLRYNKDVVAKHIESGQPVGDEGIEEGFEFLGEVQESVRTGAWVGDCFVYTNGTNRLNYYVGGEVVTLGHLDRPLFLLGYIPTHSRVYLADKDMNVVSYYLSLAVLEYQTAVIRKDFDAARSILPTVPNKQRNRVAQFLEKQGVSLDPEHRFELAVQLRKLDTAFQIALEAASEPKWKQLGDLALACWDFRLAEESLIHAKDFSGLLLLYSSSGNADGLTRLAITARTEGRNNIAFLSMFLLGRVEECLDLLVSTKRLPEAAFFARTYAPSHVSQVVSLWRADLETSNKKAAESLADPTEYENLFPDLGLAVKAEQLFYQLRDNRKIPAAAYPEVRAQGLPNLLEVVRLNGAALAEEAPVANGNGDADHGQEEEPEADEELEEPIADAPTPVVAAPAPVVAAPAPVAAVPAPVTPAKKAPSPVADDDDDLDLEAEIEAAGDDVGADVNVDDLLEEDDLLS* # ORIGINAL: g11262.t1 original gene structure, not modified by PASA NODE_264_length_28720_cov_56.7274 AUGUSTUS gene 20854 26446 . - . ID=g11262;Name=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS mRNA 20854 26446 . - . ID=g11262.t1;Parent=g11262;Name=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 26330 26446 . - . ID=g11262.t1.exon1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 26330 26446 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 25717 26031 . - . ID=g11262.t1.exon2;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 25717 26031 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 25369 25568 . - . ID=g11262.t1.exon3;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 25369 25568 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 24726 24938 . - . ID=g11262.t1.exon4;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 24726 24938 . - 1 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 24215 24511 . - . ID=g11262.t1.exon5;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 24215 24511 . - 1 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 23861 24032 . - . ID=g11262.t1.exon6;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 23861 24032 . - 1 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 23545 23635 . - . ID=g11262.t1.exon7;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 23545 23635 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 23116 23279 . - . ID=g11262.t1.exon8;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 23116 23279 . - 2 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 22756 22902 . - . ID=g11262.t1.exon9;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 22756 22902 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 22455 22547 . - . ID=g11262.t1.exon10;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 22455 22547 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 21921 22070 . - . ID=g11262.t1.exon11;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 21921 22070 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 20854 21534 . - . ID=g11262.t1.exon12;Parent=g11262.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 20854 21534 . - 0 ID=cds.g11262.t1;Parent=g11262.t1 #PROT g11262.t1 g11262 MARDYASRGTKGDNRVPLGSLTLPMQEAAMVEDLLAVMIGVEGRYIRVKTTSPQSETPRRGELPLASPTSHALPSTATSSSANLPAREFTVDGELDPSLHELLGRILEICASYSTVSSFVQRGVSFDAGLVVHAFCAALRTLLKEYYVFVCQLEQQFREGRLTLQRFWYYIQPPLRTIGALDAITSAIALQRCRGAQLLTLLHQQAALISSEGKGRDLCLFLIRAASEPYFVMLRSWVLRGDIEDPHAEFLVEEMTPDQARKELEKTDVAGNFDPRWAGRYRVVDARVPSFLRPVVSQILDSGRYVNAVGSTVAAASPVPAEVEAAIAYSTRERDYCDAIEKAHGRASSVLLQLLSREHRLMERVRCLRRYFMLEQGDFVVHFMDLAFDELLKKRAADCSMPRLEALMELSLRTSTANSDPFKDLLKCDLLPLNLVQQLATLTSGSAGSLKHISPAKMAADIDMQDISGLEAFTIDFEATWPVSIVISRGAIVKYQLLFRHLLYLKHVERQLAESWIDFKVVRMLHGSAVSQFSPALTLRQRMLGVIQAFIYYATMEVIEPNWQSFELLCEKAENVDQIVKGHNECLDNCLHETMLTNMSLVKGLAKMLSVCVIFSNYLARLHSSIFRHTAQSVDMSRMKRKARLQAHDINVQVTSDHVTRVLSDEGFVKMTAQFEENFMTQLASLIHTITRLSVPTSAPIAAASPVPSAAPSRPPPGSAPATRDAEPASSAAGVADDAPGLRGSGGDFKNQKFAILSSLLDYNGFYSAEFARRGLTGPASARSKLVAKQQDAGADGQSGQQEASRGVNIPGSTGHTAYSSSTTTSTTAGSAGVGKTAHVSAATRASGVVAVAGGASSRATAGTVRPTATATAARPLKK* # ORIGINAL: g11259.t1 original gene structure, not modified by PASA NODE_264_length_28720_cov_56.7274 AUGUSTUS gene 10854 13152 . - . ID=g11259;Name=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS mRNA 10854 13152 . - . ID=g11259.t1;Parent=g11259;Name=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 13004 13152 . - . ID=g11259.t1.exon1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 13004 13152 . - 0 ID=cds.g11259.t1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 12504 12685 . - . ID=g11259.t1.exon2;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 12504 12685 . - 1 ID=cds.g11259.t1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 12140 12246 . - . ID=g11259.t1.exon3;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 12140 12246 . - 2 ID=cds.g11259.t1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 11737 11873 . - . ID=g11259.t1.exon4;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 11737 11873 . - 0 ID=cds.g11259.t1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 11285 11411 . - . ID=g11259.t1.exon5;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 11285 11411 . - 1 ID=cds.g11259.t1;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS exon 10854 10961 . - . ID=g11259.t1.exon6;Parent=g11259.t1 NODE_264_length_28720_cov_56.7274 AUGUSTUS CDS 10854 10961 . - 0 ID=cds.g11259.t1;Parent=g11259.t1 #PROT g11259.t1 g11259 MANSTVFIAIMATVLALNAASAIAASSTCSFAVAGESALLDLSKLRKADDTEYYMRETVEGRQFSYLINICSDVKHSGVDPHVAVFQESGADERDFTLGLHTQASATRLASGDIQLIFAGGDKCHNDKFERQSIINFDCDATYASVGEPIFNNENDNCTYYFNWRTNACSNPLDTVPKSSSGVSVGSVVMIIFAVVIGLYLILGVIYKRVVMGAKGIEQIPNIDTWRSIGATCASIRCWGRGNNDTVKYRGLDDAEEDLHDDDDRLVEA* # PASA_UPDATE: g11260.t1, single gene model update, valid-1, status:[pasa:asmbl_4730,status:12], valid-1 NODE_264_length_28720_cov_56.7274 . gene 13720 14878 . + . ID=g11260;Name=g11260.t1 NODE_264_length_28720_cov_56.7274 . mRNA 13720 14878 . + . ID=g11260.t1;Parent=g11260;Name=g11260.t1 NODE_264_length_28720_cov_56.7274 . five_prime_UTR 13720 13800 . + . ID=g11260.t1.utr5p1;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . exon 13720 13891 . + . ID=g11260.t1.exon1;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . CDS 13801 13891 . + 0 ID=cds.g11260.t1;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . exon 14188 14284 . + . ID=g11260.t1.exon2;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . CDS 14188 14284 . + 2 ID=cds.g11260.t1;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . exon 14720 14878 . + . ID=g11260.t1.exon3;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . CDS 14720 14768 . + 1 ID=cds.g11260.t1;Parent=g11260.t1 NODE_264_length_28720_cov_56.7274 . three_prime_UTR 14769 14878 . + . ID=g11260.t1.utr3p1;Parent=g11260.t1 #PROT g11260.t1 g11260 MSASKAADAPTQPSVDLLEEDDEFEEFPAEEWGQDKEDRQDAKEWEDDWDDDNVEDDFSKQLRAELEKVATNPQPMKI* # PASA_UPDATE: g11263.t1, single gene model update, valid-1, status:[pasa:asmbl_4725,status:12], valid-1 NODE_264_length_28720_cov_56.7274 . gene 26993 28494 . + . ID=g11263;Name=g11263.t1 NODE_264_length_28720_cov_56.7274 . mRNA 26993 28494 . + . ID=g11263.t1;Parent=g11263;Name=g11263.t1 NODE_264_length_28720_cov_56.7274 . five_prime_UTR 26993 27171 . + . ID=g11263.t1.utr5p1;Parent=g11263.t1 NODE_264_length_28720_cov_56.7274 . exon 26993 28494 . + . ID=g11263.t1.exon1;Parent=g11263.t1 NODE_264_length_28720_cov_56.7274 . CDS 27172 28494 . + 0 ID=cds.g11263.t1;Parent=g11263.t1 #PROT g11263.t1 g11263 MSGLPAASAVADALAKAKALALERARMAMAQQQQPQQQQLYQQQQQQQQQQQQAMMMQAMARPSMPFPFAPQSMPFAGGVRPAGMPFQARPAFDPSTAGAGLGAAAHVPPANEPQRRAQPVLLDDQGRIVDSAGNVLSVPKYVPQLIANRRALEDGQDREDVKRAKVKEEPEVKVNPYFDPRVKFSDRSVRKERALKFHDKGKFEQQAHRIRAKAQLERLQFEIAESARKSGLETKRAVAATTTLVEDPSAAEDVPDVEWWDAAIIPGNTYDMPVPDAATDLKSLYPNITHLVEHPVEINPPAEPAVAPAMPVMLTTKEKKKLRMQRRRAAEKELQEKIQMGLAPAPEVKVKLSNMMRVYGQEAVQDPTKVEAEVRAQMEKRQKIHDEANLARMLTPEERKAKKLRKLTEDTSLEVHVAVFRCVVFYYLLGHTILAVLFS* # PASA_UPDATE: g11257.t1, single gene model update, valid-1, status:[pasa:asmbl_4727,status:12], valid-1 NODE_264_length_28720_cov_56.7274 . gene 116 2230 . + . ID=g11257;Name=g11257.t1 NODE_264_length_28720_cov_56.7274 . mRNA 116 2230 . + . ID=g11257.t1;Parent=g11257;Name=g11257.t1 NODE_264_length_28720_cov_56.7274 . five_prime_UTR 116 137 . + . ID=g11257.t1.utr5p1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 116 448 . + . ID=g11257.t1.exon1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 138 448 . + 0 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 565 679 . + . ID=g11257.t1.exon2;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 565 679 . + 1 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 836 975 . + . ID=g11257.t1.exon3;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 836 975 . + 0 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 1141 1228 . + . ID=g11257.t1.exon4;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 1141 1228 . + 1 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 1488 1654 . + . ID=g11257.t1.exon5;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 1488 1654 . + 0 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . exon 1908 2230 . + . ID=g11257.t1.exon6;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . CDS 1908 1989 . + 1 ID=cds.g11257.t1;Parent=g11257.t1 NODE_264_length_28720_cov_56.7274 . three_prime_UTR 1990 2230 . + . ID=g11257.t1.utr3p1;Parent=g11257.t1 #PROT g11257.t1 g11257 MEVRHQKEVRRLNEAIDDFRLMQQTKDRRREWDLNDPDAKRKDKPARVDDADERCGVSSIQKFTGEDLRHDERAKVQQSQFRDWIEQQIEERTNYKKEMDALQRQYELHQADIDARRAEMEHTESELRRTLATMTRDYNLALADEKRLKDAEARIATLADNETELKNNITGDFLTENPDVAISSFGPHRVVVDRYKGMSPKDKRDILDTQEMQRRDKQARRAAEAAEKRQWDIMLEAQHREALKMERRMDRARKQHATELLEQNKSLAQEQKEKINFIEKVVYTNPPSEDFFAQFNTSSR* # ORIGINAL: g6510.t1 original gene structure, not modified by PASA NODE_2780_length_5142_cov_39.9674 AUGUSTUS gene 676 3306 . - . ID=g6510;Name=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS mRNA 676 3306 . - . ID=g6510.t1;Parent=g6510;Name=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 2136 3306 . - . ID=g6510.t1.exon1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 2136 3306 . - 0 ID=cds.g6510.t1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 1774 1846 . - . ID=g6510.t1.exon2;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 1774 1846 . - 2 ID=cds.g6510.t1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 1459 1552 . - . ID=g6510.t1.exon3;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 1459 1552 . - 1 ID=cds.g6510.t1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 1202 1298 . - . ID=g6510.t1.exon4;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 1202 1298 . - 0 ID=cds.g6510.t1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 997 1081 . - . ID=g6510.t1.exon5;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 997 1081 . - 2 ID=cds.g6510.t1;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS exon 676 847 . - . ID=g6510.t1.exon6;Parent=g6510.t1 NODE_2780_length_5142_cov_39.9674 AUGUSTUS CDS 676 847 . - 1 ID=cds.g6510.t1;Parent=g6510.t1 #PROT g6510.t1 g6510 MVAFEAVGGMAKRGPAAKALAAAAAHAAAQQHHEAFANMPELTLDNIMDFLDDDTAEHNTVDPSPFLSPVMYTEEMPDEGSFTPLESPALPPINLQHAAQQAVAQAQQAAAAAHAAVAAAAMQQMRTPKQKATPGMTPVTSGLNGINIGEDATDMTPLVSPALKPYGLAGDLGKLAGGPGGILMGAAPLFPLTPAAMIGLHQQQQQHLQQQQQLQQQQLQELQMRVVKNAQAAAAAPSGLQRRKSSGHVGGSARQPSLQQQHIQQQQQQLQQQQLQQHQLQQQQQQERSTSCPATPGSLMGLFNSFSSTPTASMDSTGAVFVAPQPVRRPSTQQPVRPPLISPALPPQSPRVQPVDPSSIFSPLVSPALHPEVMAKRSASGGRSTKMAAPNSMADMAQQLETKSNYQAMLEGQWEVLGFSPDIVKVVEDRRNTHKVSEKRRRDDLKYGFDELRSLIPAGALPPPSKGNPPSKAAILKKAVDYVKFLHKQRAKMAEEMNKLREQLGQPAFEHTWDEGDRDGDNDSGDMETNDHKESDGNNDDDNANDESSGELNANGGGDSSRG* # PASA_UPDATE: g6511.t1, single gene model update, valid-1, status:[pasa:asmbl_4995,status:12], valid-1 NODE_2780_length_5142_cov_39.9674 . gene 4440 5114 . - . ID=g6511;Name=g6511.t1 NODE_2780_length_5142_cov_39.9674 . mRNA 4440 5114 . - . ID=g6511.t1;Parent=g6511;Name=g6511.t1 NODE_2780_length_5142_cov_39.9674 . exon 5037 5114 . - . ID=g6511.t1.exon1;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . CDS 5037 5114 . - 0 ID=cds.g6511.t1;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . exon 4837 4922 . - . ID=g6511.t1.exon2;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . CDS 4837 4922 . - 0 ID=cds.g6511.t1;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . exon 4440 4627 . - . ID=g6511.t1.exon3;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . CDS 4510 4627 . - 1 ID=cds.g6511.t1;Parent=g6511.t1 NODE_2780_length_5142_cov_39.9674 . three_prime_UTR 4440 4509 . - . ID=g6511.t1.utr3p1;Parent=g6511.t1 #PROT g6511.t1 g6511 MTPLVLVRLLGICSSAIVLLGCACTWWSKEEEDAFKEPIVRKYEKEGHPYFASARLWDDGVIDPLDTRQVLGLGLSASLNAPIQDTQFGVFRM* # ORIGINAL: g10342.t1 original gene structure, not modified by PASA NODE_3696_length_2936_cov_37.9095 AUGUSTUS gene 1742 2691 . + . ID=g10342;Name=g10342.t1 NODE_3696_length_2936_cov_37.9095 AUGUSTUS mRNA 1742 2691 . + . ID=g10342.t1;Parent=g10342;Name=g10342.t1 NODE_3696_length_2936_cov_37.9095 AUGUSTUS exon 1742 2315 . + . ID=g10342.t1.exon1;Parent=g10342.t1 NODE_3696_length_2936_cov_37.9095 AUGUSTUS CDS 1742 2315 . + 0 ID=cds.g10342.t1;Parent=g10342.t1 NODE_3696_length_2936_cov_37.9095 AUGUSTUS exon 2612 2691 . + . ID=g10342.t1.exon2;Parent=g10342.t1 NODE_3696_length_2936_cov_37.9095 AUGUSTUS CDS 2612 2691 . + 2 ID=cds.g10342.t1;Parent=g10342.t1 #PROT g10342.t1 g10342 MSNMEAPTLAAHELELRIDAQQHHQQQPSPSSLSPRRSSKQKKKRKPDSPSESSGEYGAMGSGGSEHAVSAGEDEAGPSSSAGPSVASSNAASTSSLSGRASKSGKRVRHAKAGGDAHGPASGSGAASSSSGGHDNQQHWSDYKKREVAAQFQKLKEQYEKGLMTPDEYKQAKNALIDNLTGTITPSKGNPDFNPENMPSLPQRNAIARPKLLLHGG* # PASA_UPDATE: g10341.t1, single gene model update, valid-1, status:[pasa:asmbl_6417,status:12], valid-1 NODE_3696_length_2936_cov_37.9095 . gene 422 1246 . + . ID=g10341;Name=g10341.t1 NODE_3696_length_2936_cov_37.9095 . mRNA 422 1246 . + . ID=g10341.t1;Parent=g10341;Name=g10341.t1 NODE_3696_length_2936_cov_37.9095 . exon 422 622 . + . ID=g10341.t1.exon1;Parent=g10341.t1 NODE_3696_length_2936_cov_37.9095 . CDS 422 622 . + 0 ID=cds.g10341.t1;Parent=g10341.t1;5_prime_partial=true NODE_3696_length_2936_cov_37.9095 . exon 939 1246 . + . ID=g10341.t1.exon2;Parent=g10341.t1 NODE_3696_length_2936_cov_37.9095 . CDS 939 1115 . + 0 ID=cds.g10341.t1;Parent=g10341.t1 NODE_3696_length_2936_cov_37.9095 . three_prime_UTR 1116 1246 . + . ID=g10341.t1.utr3p1;Parent=g10341.t1 #PROT g10341.t1 g10341 LRERGNVSYYQRRYDDAARLYTASIRLDSSNHVVYSNRAAAFYQLGEFQRAVVDTDSCIELNSQFLKAYIRKGRALEALGRHQQAVDAFMSGLQIEPHDDALLACLRKLERTSHVTANGGTSSSR* # ORIGINAL: g12598.t1 original gene structure, not modified by PASA NODE_2484_length_6101_cov_34.9323 AUGUSTUS gene 46 191 . + . ID=g12598;Name=g12598.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS mRNA 46 191 . + . ID=g12598.t1;Parent=g12598;Name=g12598.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 46 191 . + . ID=g12598.t1.exon1;Parent=g12598.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 46 191 . + 2 ID=cds.g12598.t1;Parent=g12598.t1 #PROT g12598.t1 g12598 TSAPSFPTTVRAQSPGSFGCAGTLKPLCVPRRASSRKTLPPLLQTTSS # ORIGINAL: g12599.t1 original gene structure, not modified by PASA NODE_2484_length_6101_cov_34.9323 AUGUSTUS gene 1107 5821 . - . ID=g12599;Name=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS mRNA 1107 5821 . - . ID=g12599.t1;Parent=g12599;Name=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 5633 5821 . - . ID=g12599.t1.exon1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 5633 5821 . - 0 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 5354 5471 . - . ID=g12599.t1.exon2;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 5354 5471 . - 0 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 4982 5148 . - . ID=g12599.t1.exon3;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 4982 5148 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 4652 4862 . - . ID=g12599.t1.exon4;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 4652 4862 . - 0 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 4157 4251 . - . ID=g12599.t1.exon5;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 4157 4251 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 3879 3954 . - . ID=g12599.t1.exon6;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 3879 3954 . - 0 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 3644 3723 . - . ID=g12599.t1.exon7;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 3644 3723 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 3280 3397 . - . ID=g12599.t1.exon8;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 3280 3397 . - 0 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 2956 3081 . - . ID=g12599.t1.exon9;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 2956 3081 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 2651 2743 . - . ID=g12599.t1.exon10;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 2651 2743 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 2318 2435 . - . ID=g12599.t1.exon11;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 2318 2435 . - 2 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 1975 2013 . - . ID=g12599.t1.exon12;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 1975 2013 . - 1 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 1768 1806 . - . ID=g12599.t1.exon13;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 1768 1806 . - 1 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 1477 1563 . - . ID=g12599.t1.exon14;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 1477 1563 . - 1 ID=cds.g12599.t1;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS exon 1107 1233 . - . ID=g12599.t1.exon15;Parent=g12599.t1 NODE_2484_length_6101_cov_34.9323 AUGUSTUS CDS 1107 1233 . - 1 ID=cds.g12599.t1;Parent=g12599.t1 #PROT g12599.t1 g12599 MTACIGICRYKILVSERSRSGNSDKVICQQMLGELVQRVPQLKQEAQLGKTLLFIKQPETLFKLEELRQTMVGAHAAVIQRAWRRFVKRRHYVKLRKQATDYVAKKKERRRESILRPFDGDYVNYYHNKGLRRIVESNGPSENMVFADTCYSVRAGPKGAIKDKRHLIVTDGAVYIVEHNVSMNNRPAPNDTQVVNEQFHLRRRIPLKDLRGFSLSTLADNYFVLHVSEFKPSEAAEWVEDNTVEACTKCKKAFWLFFRKHHCRRCGKIFCDACCPENVAPLPDRGIHEPTRVCYDCIGLESSEPWQDFVIESFRKTEIMVILTDACSKHAKTKLNITFSDGIKFYIAGDKGALLDRTLTFRKDNSVDEFDPPVSVQGTTLAVAVPGGVPSDVVQKHKRSEEQRAKSREAKRQKEQEQQQRLSAEREKQREAMRRQRIEEKKAKKAGQRVGSSSSASTSAAAPRPSSIAAAPVAAPRPSSIAGAPVAAPRPSSSGANPSEAPRRTLPMPGGGTPVVAPRPTSALPPGGLVPKGPCNECSCKAYRAHPIKKGTCAGCQHTH* # ORIGINAL: g3000.t1 original gene structure, not modified by PASA NODE_5064_length_1045_cov_45.9155_potentialcontaminant AUGUSTUS gene 241 744 . - . ID=g3000;Name=g3000.t1 NODE_5064_length_1045_cov_45.9155_potentialcontaminant AUGUSTUS mRNA 241 744 . - . ID=g3000.t1;Parent=g3000;Name=g3000.t1 NODE_5064_length_1045_cov_45.9155_potentialcontaminant AUGUSTUS exon 241 744 . - . ID=g3000.t1.exon1;Parent=g3000.t1 NODE_5064_length_1045_cov_45.9155_potentialcontaminant AUGUSTUS CDS 241 744 . - 0 ID=cds.g3000.t1;Parent=g3000.t1 #PROT g3000.t1 g3000 MDVHIGKPRLPSARFAATNHIFCPSDSVFYEVRKEPALTIALREFAYTAAADGVDGADDLVLAQITRRIPDQAGVPFEDAVAWCLCKQAMDVRRRVSMNRVPLITVLAPFFPQGFRAHPELDSFTVVLMHVVNYVWRGEPFAVAMKDPTATCCRVSSFAHADIIFAA* # PASA_UPDATE: g7084.t1, single gene model update, valid-1, status:[pasa:asmbl_2221,status:12], valid-1 NODE_1640_length_10047_cov_45.6923 . gene 7577 10047 . - . ID=g7084;Name=g7084.t1 NODE_1640_length_10047_cov_45.6923 . mRNA 7577 10047 . - . ID=g7084.t1;Parent=g7084;Name=g7084.t1 NODE_1640_length_10047_cov_45.6923 . five_prime_UTR 10046 10047 . - . ID=g7084.t1.utr5p1;Parent=g7084.t1 NODE_1640_length_10047_cov_45.6923 . exon 7577 10047 . - . ID=g7084.t1.exon1;Parent=g7084.t1 NODE_1640_length_10047_cov_45.6923 . CDS 7577 10045 . - 0 ID=cds.g7084.t1;Parent=g7084.t1;5_prime_partial=true #PROT g7084.t1 g7084 SGRLQRCAAPRPTSASSRPTPVFPLPAPVSPLPTSVSTHISHISHISREFKPPKDTPNLQQIITTENEQSAKGSSGGAPLQSPGGMLRSQQSKPVRHVATNSPVSNLDNCMPPPNSFQMNVDAIKLRIQTCTESLRQCISDCDGLAVRIGLQTNGLTESRRHLDNDYASDARELAVYFPVYGVVKAGKSTLLSCLTRTTILPSRPLPMTTIPIKILHKGGTEGISLVIPNAEQWNACIADVVKTKALPTGKKHPDHVTLLFNNSKEGRVRFQTGILRDADTIADELMLLSDVARLCFLLGVDLDKYNIDLSLEHLPLITMDIAIFRNLGVDRPFYLVDTPGPDESGCSTALEKINQRVLEGSRGALLVAPQNQIGSNAMNDVLGSIADSKRKILVALSHVDGMSDRKKELPDVIERLEGIMSEAGCLFEIIPVAASRIKMMCELQAELDSGRAGFAESKIWTQVVQAMGIHPEQLVDVKEYARKIIPQELETYNAVDLVKAVKGFYLDWDVFALQTRVDDLTDVRKALDKFVEQIKTSMDKVAQDNELMKLQNAQENASGFRSQVRNLVLTLRLTLRNSFNVERENFIAVTKKLVQENVKIVNADNPTAKSMRFKSSVVMITWCTDNTVRIAKSTIAPRCNEFLDTVRKNTSGVVELEWRKLQTLLKEVEQNIGQRLRLTNLSQPPTFTLRNPNYTVDPDNIDFSVFSEREKGGVVIKDTDTFVDVVSQNLIKTASLFANAAYARFEESLESILNKFQERADEYVRRVHDLIRCQKGLQTADRDQRLAQLRAYETSASANHENAKTQLEALRIALGLPRDDK* # PASA_UPDATE: g7082.t1, single gene model update, valid-1, status:[pasa:asmbl_2220,status:3], valid-1 NODE_1640_length_10047_cov_45.6923 . gene 365 2902 . - . ID=g7082;Name=g7082.t1 NODE_1640_length_10047_cov_45.6923 . mRNA 365 2902 . - . ID=g7082.t1;Parent=g7082;Name=g7082.t1 NODE_1640_length_10047_cov_45.6923 . five_prime_UTR 2356 2902 . - . ID=g7082.t1.utr5p1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . exon 2227 2902 . - . ID=g7082.t1.exon1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . CDS 2227 2355 . - 0 ID=cds.g7082.t1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . exon 1641 1868 . - . ID=g7082.t1.exon2;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . CDS 1641 1868 . - 0 ID=cds.g7082.t1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . exon 1148 1273 . - . ID=g7082.t1.exon3;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . CDS 1148 1273 . - 0 ID=cds.g7082.t1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . exon 365 803 . - . ID=g7082.t1.exon4;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . CDS 495 803 . - 0 ID=cds.g7082.t1;Parent=g7082.t1 NODE_1640_length_10047_cov_45.6923 . three_prime_UTR 365 494 . - . ID=g7082.t1.utr3p1;Parent=g7082.t1 #PROT g7082.t1 g7082 MASAEITPTSILLQIGTSVAFWHALRMFSSSLIPGKLSHVSTEVSRELLSLGHCISNLIGASLGLALRGVLHDHHLPWFACLSIAYMFVDLGFILALPKRRLADNLMIFHHTAVVLWQACCFVDTRLLELFYYGSFFEITSLVYNIECVSRAALRKDIANKIRPFHRMLFIVIRPTATYLMFGAIARLCDRSTPNNKTVWACFALMTLFNALLLSFFAYGLVKDAIRFASGGKRRRIADADTSVPTATATGSVSAHALATKEE* # ORIGINAL: g7083.t1 original gene structure, not modified by PASA NODE_1640_length_10047_cov_45.6923 AUGUSTUS gene 4756 6667 . - . ID=g7083;Name=g7083.t1 NODE_1640_length_10047_cov_45.6923 AUGUSTUS mRNA 4756 6667 . - . ID=g7083.t1;Parent=g7083;Name=g7083.t1 NODE_1640_length_10047_cov_45.6923 AUGUSTUS exon 5820 6667 . - . ID=g7083.t1.exon1;Parent=g7083.t1 NODE_1640_length_10047_cov_45.6923 AUGUSTUS CDS 5820 6667 . - 0 ID=cds.g7083.t1;Parent=g7083.t1 NODE_1640_length_10047_cov_45.6923 AUGUSTUS exon 4756 5146 . - . ID=g7083.t1.exon2;Parent=g7083.t1 NODE_1640_length_10047_cov_45.6923 AUGUSTUS CDS 4756 5146 . - 1 ID=cds.g7083.t1;Parent=g7083.t1 #PROT g7083.t1 g7083 MGGIDVVLSAMRTHRDHAGVQESGCGALWHLAVINDNQVKIAQKGGIDEVVSAMREHAGHAGVQESGCGALSHLSLSMDNNLSIARTGGIGAVVSAMQTHAGHAGVQESGCVALASLGANDDNKVTVAREGGIQAVLSAMQAQAGHAGVQESACGALAILSVNHNNMVAREGGIKAVVSAMRAHVDDAGVQERGCWVLRNLSIANDNNKVTIAREGGMDAVVSAMRAHAGHAGVQESGCSALWNLSANEDNKNVSNGRIHLDSSSVSAASVVSKKKEANPSDLDGLNVLLFVQASGIARATVSAAGLAGVGASAAVAIVATATGSVSVSVAATAVAMGAMGATSAALDTPPSASESIACLCASLADSVDVHRVSCRPPGGARTRRFELASTAAAVPARFVLLVVVVVARLAA* # ORIGINAL: g9351.t1 original gene structure, not modified by PASA NODE_1238_length_12826_cov_42.2136 AUGUSTUS gene 472 5933 . - . ID=g9351;Name=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS mRNA 472 5933 . - . ID=g9351.t1;Parent=g9351;Name=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 5582 5933 . - . ID=g9351.t1.exon1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 5582 5933 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 5026 5289 . - . ID=g9351.t1.exon2;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 5026 5289 . - 2 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 4583 4647 . - . ID=g9351.t1.exon3;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 4583 4647 . - 2 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 4082 4174 . - . ID=g9351.t1.exon4;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 4082 4174 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 3440 3693 . - . ID=g9351.t1.exon5;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 3440 3693 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 2894 3170 . - . ID=g9351.t1.exon6;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 2894 3170 . - 1 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 2297 2488 . - . ID=g9351.t1.exon7;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 2297 2488 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 1811 1952 . - . ID=g9351.t1.exon8;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 1811 1952 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 1663 1673 . - . ID=g9351.t1.exon9;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 1663 1673 . - 2 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 1362 1466 . - . ID=g9351.t1.exon10;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 1362 1466 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 952 1072 . - . ID=g9351.t1.exon11;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 952 1072 . - 0 ID=cds.g9351.t1;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 472 664 . - . ID=g9351.t1.exon12;Parent=g9351.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 472 664 . - 2 ID=cds.g9351.t1;Parent=g9351.t1 #PROT g9351.t1 g9351 MNGSSSLAPTPFLLADAVTCTTLSWESQPPLEGINNASLPTLAVVCDNGATDSVTLRTNNSNSIVGDALVTAALDGGSPSRAAFPNVMLKQGSNRLFVTVAGSDAILVADRNTTVYPAVFTIGGLHFKNNAFRTHAGEYLTMLASEIVSTDKVLLPNTTLRYLRRSTACTAPATAVKAAIDYVQNYAADVFLGPVCSAESKQVHVIASVYGVPMLSYWSGILELSDKKVYPYFLRGQDPLSEDYGYASLLNHFGWRTVSIVEYEIFPYSDLFYARIASLGIDIRAKYVVRSGRTDFSDGVAVLRSSGSRVFVSNVYNAGGNGDAARFLKAMAAAGLAGPGYTWIMGSDASLTLDPASNWLTADERRLFNGSFGVANLLPKGDFGLRRRLADMWNARNLTLLGEPALIAPLPAVVYENVTGRADTFITEAAMAVDALLTLVRGFHDLAYVQKVYITPQRLLQTLFATNFVGVTGRVSYDVNGDRLAMTELRNFRYTDASGGSLVRIGFASYDATRNATVNLSESGYVSRTNTGGVWWSTGVSAVPPALLSSSFAREVASTASAEHTTHAFAVADGPAAALEPTALSRYVLHVRMACALPRRCVPVAPDGTDRRAPYRQMVRVQTRVGMIAGIVVGVVGFILLALCISFFVFYRRRRAAIYNDARQWQIDIESLVFVKLIGRGAFGKVYKG # ORIGINAL: g9353.t1 original gene structure, not modified by PASA NODE_1238_length_12826_cov_42.2136 AUGUSTUS gene 12572 12826 . + . ID=g9353;Name=g9353.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS mRNA 12572 12826 . + . ID=g9353.t1;Parent=g9353;Name=g9353.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS exon 12572 12826 . + . ID=g9353.t1.exon1;Parent=g9353.t1 NODE_1238_length_12826_cov_42.2136 AUGUSTUS CDS 12572 12826 . + 0 ID=cds.g9353.t1;Parent=g9353.t1 #PROT g9353.t1 g9353 MEMKSPKVTVDIETGVDEKKPKRCCGGLRDRWAALPTWQKVAIILTIIAIAVVVTVIVILYGLAPLIAQDNVNNSRFVMETVVMK # PASA_UPDATE: g9352.t1, single gene model update, valid-1, status:[pasa:asmbl_912,status:12], valid-1 NODE_1238_length_12826_cov_42.2136 . gene 7274 11082 . + . ID=g9352;Name=g9352.t1 NODE_1238_length_12826_cov_42.2136 . mRNA 7274 11082 . + . ID=g9352.t1;Parent=g9352;Name=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 7274 8144 . + . ID=g9352.t1.exon1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 7274 8144 . + 0 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 8273 8411 . + . ID=g9352.t1.exon2;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 8273 8411 . + 2 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 8665 8819 . + . ID=g9352.t1.exon3;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 8665 8819 . + 1 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 8954 9221 . + . ID=g9352.t1.exon4;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 8954 9221 . + 2 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 9324 9553 . + . ID=g9352.t1.exon5;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 9324 9553 . + 1 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 9782 10012 . + . ID=g9352.t1.exon6;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 9782 10012 . + 2 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 10184 10272 . + . ID=g9352.t1.exon7;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 10184 10272 . + 2 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 10523 10568 . + . ID=g9352.t1.exon8;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 10523 10568 . + 0 ID=cds.g9352.t1;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . exon 10829 11082 . + . ID=g9352.t1.exon9;Parent=g9352.t1 NODE_1238_length_12826_cov_42.2136 . CDS 10829 11082 . + 2 ID=cds.g9352.t1;Parent=g9352.t1 #PROT g9352.t1 g9352 MPTVGEQSAAGRNRLSLSLSSRRAARARQGSGFALAPTLSHHDEDADLSRSEHIQHMDMEARDEVDGADTNDLGEAPDDIDESMCTAEDAATRGRLVSAAPAVPSAALMGILDAFSNKPRTGANNGRPASTVGTSTPHRTASAQGDSLLADRRQSERVRVAAAIAASTVVSSDTKSVAVVAEATQERATSAGRSGARGATAARGEVDDSRHTNVSVHVGAASQGDRSVGSARDTVATVDADEEADGDARAKRPRLALTTEGDVGRIAARVVDHRSVTWKVFESDDSESDAVRQTVARQPLSRRRSAVNGGHHVGGGLAMIDPLAASRRLLQSLSIHRSSGHFDRRVTCVEWHPRRPDVLATASHGGDIVLWEFDADGSDNAVPRILGEGAGGSITDMKFDPTCGSESGPLTSSRVYSTSVDGTFRLRDFSSNVSRVLLNTGNWHYWYCTLALPPGSHGVAFAGDNAGNGRFVDERMQRVAMELRMHKQKLQHAEFHPTLPHVLLTAGNDKCVRFWDVRMTRAARVTTTDPCPNVDAVVEAATLGKIEFDSPINAAYLNPAGQRLLTTTQDDRISVHDINAHITCADADSRASLVVLHPHRHFQHLAKIIATWHPRLDLFVIGRYPDPEYGSGDRRSIDCYCAKTGAIAARIKDPSFDGIVSINKFNWDGETLASGAGRSTIVWKRRGDDTNGPMGGTIASRKRGGGGAHDGDSDDGDANGGNARGKRPRTTKTAGKPAASKTNSKANSKAGDGGKGKGRA* # ORIGINAL: g698.t1 original gene structure, not modified by PASA NODE_3030_length_4493_cov_43.3988 AUGUSTUS gene 167 875 . - . ID=g698;Name=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS mRNA 167 875 . - . ID=g698.t1;Parent=g698;Name=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS exon 678 875 . - . ID=g698.t1.exon1;Parent=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS CDS 678 875 . - 0 ID=cds.g698.t1;Parent=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS exon 390 524 . - . ID=g698.t1.exon2;Parent=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS CDS 390 524 . - 0 ID=cds.g698.t1;Parent=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS exon 167 277 . - . ID=g698.t1.exon3;Parent=g698.t1 NODE_3030_length_4493_cov_43.3988 AUGUSTUS CDS 167 277 . - 0 ID=cds.g698.t1;Parent=g698.t1 #PROT g698.t1 g698 MPLHGGDKGLSNEPGQNNCFLNTAVQVLFHIPSFRLKFASLSAHTCGNGVPSGGRGIAGCIFCALKVLFTQLEFSDERALPPDALRNALGNAYEQQSRFRVGEMDDAVECFESLLNSLHREVTGLSDDDTCTPPCIAHWIFALSLLEQ # PASA_UPDATE: g699.t1, single gene model update, valid-1, status:[pasa:asmbl_5452,status:12], valid-1 NODE_3030_length_4493_cov_43.3988 . gene 1464 4319 . + . ID=g699;Name=g699.t1 NODE_3030_length_4493_cov_43.3988 . mRNA 1464 4319 . + . ID=g699.t1;Parent=g699;Name=g699.t1 NODE_3030_length_4493_cov_43.3988 . five_prime_UTR 1464 1597 . + . ID=g699.t1.utr5p1;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . exon 1464 1927 . + . ID=g699.t1.exon1;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . CDS 1598 1927 . + 0 ID=cds.g699.t1;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . exon 2345 2446 . + . ID=g699.t1.exon2;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . CDS 2345 2446 . + 0 ID=cds.g699.t1;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . exon 2793 2944 . + . ID=g699.t1.exon3;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . CDS 2793 2944 . + 0 ID=cds.g699.t1;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . exon 3255 4319 . + . ID=g699.t1.exon4;Parent=g699.t1 NODE_3030_length_4493_cov_43.3988 . CDS 3255 4319 . + 1 ID=cds.g699.t1;Parent=g699.t1;3_prime_partial=true #PROT g699.t1 g699 MPIEVSAGSNPRPSMPTGSASAGGASTRATAGANGARLPNRGTGGRGKQPETGGLRGGIPGAKKRTAHDPKKRAEVETLVRERIEAERQAFQMQLKLIDGPVDASALLAAANHIQPSHYADIVEERHIARVCGYPLCSNRLPREDSKGIYKISLPEKKVYDVRELRSFCHKECLAASKYFESQLSDTAVWLRKDWPICSNISLLDHAKPNAPAPATTTTPANPAEAQQASHIAPDDPFADTLRTLSIKENDPSLLINAHPPVAPSQSSVHPGVSALDKVTASLPIPRAVDSQACDGVLPNSGRRVHFGPPQVLGHAASPPHSTKPQRSPHHHRNGDPLDSDDYPSESDEDSNSDGDYETQPDGSVGAHVTASPVCALGDEADYDDEAEEEEEGGEGDVDTDSTGGVYSGVNGHRRGDALSDDSDCDVPSDDAGGSDSDGIMGGFFKPMPKVPQLGGFAALASAVTRWRTTQTDNFFSNRHTRESDEAGPRERVVLPTDATGMEENGAAGVAGKDVDGKHSRYEASMFPPVDSVNRSMVRMRAFSSQLER # PASA_UPDATE: g11060.t1, single gene model update, valid-1, status:[pasa:asmbl_2937,status:12], valid-1 NODE_1895_length_8693_cov_50.3654 . gene 62 1144 . + . ID=g11060;Name=g11060.t1 NODE_1895_length_8693_cov_50.3654 . mRNA 62 1144 . + . ID=g11060.t1;Parent=g11060;Name=g11060.t1 NODE_1895_length_8693_cov_50.3654 . five_prime_UTR 62 63 . + . ID=g11060.t1.utr5p1;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . exon 62 176 . + . ID=g11060.t1.exon1;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . CDS 64 176 . + 0 ID=cds.g11060.t1;Parent=g11060.t1;5_prime_partial=true NODE_1895_length_8693_cov_50.3654 . exon 283 436 . + . ID=g11060.t1.exon2;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . CDS 283 436 . + 1 ID=cds.g11060.t1;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . exon 600 677 . + . ID=g11060.t1.exon3;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . CDS 600 677 . + 0 ID=cds.g11060.t1;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . exon 845 1144 . + . ID=g11060.t1.exon4;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . CDS 845 1078 . + 0 ID=cds.g11060.t1;Parent=g11060.t1 NODE_1895_length_8693_cov_50.3654 . three_prime_UTR 1079 1144 . + . ID=g11060.t1.utr3p1;Parent=g11060.t1 #PROT g11060.t1 g11060 ALKSAVLFAVLAPYDNEQSDLLHRLKEEKKLAQLPVYKELLTMFLTAEIMRWSKLEAAYGQELRSTKVFGAGDAGARHWTDLRKRVVEHNIRVIAKYYTKITSKRLCQLLDLPEDEAELYLSDLVSAKTVHAKIDRPAGVIVFVERREPRELLNEWASGLNTLMALVDKTTHLITKEEMVHKITEVKTGSRH* # ORIGINAL: g11061.t1 original gene structure, not modified by PASA NODE_1895_length_8693_cov_50.3654 AUGUSTUS gene 1937 8160 . + . ID=g11061;Name=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS mRNA 1937 8160 . + . ID=g11061.t1;Parent=g11061;Name=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 1937 2038 . + . ID=g11061.t1.exon1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 1937 2038 . + 0 ID=cds.g11061.t1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 2292 2765 . + . ID=g11061.t1.exon2;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 2292 2765 . + 0 ID=cds.g11061.t1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 2980 3297 . + . ID=g11061.t1.exon3;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 2980 3297 . + 0 ID=cds.g11061.t1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 3584 5035 . + . ID=g11061.t1.exon4;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 3584 5035 . + 0 ID=cds.g11061.t1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 5110 5293 . + . ID=g11061.t1.exon5;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 5110 5293 . + 0 ID=cds.g11061.t1;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS exon 5438 8160 . + . ID=g11061.t1.exon6;Parent=g11061.t1 NODE_1895_length_8693_cov_50.3654 AUGUSTUS CDS 5438 8160 . + 2 ID=cds.g11061.t1;Parent=g11061.t1 #PROT g11061.t1 g11061 MNGIIHNCSHPNDGDPMAVIPEEKIFSDVFTRIEHIYRIIKPKQILFLAIDGVAPRAKMNQQRSRRFRSAREAEKAKQAAVAKGEAVAGADMFDSNCITPGTEFMTRLSAYLRFRIAGKIANDRAWRHIRVVFSGHEVPGEGEHKITAFIRGERARPGYNPNTRHCMYGLDADLIFLGLVSHEPHFSLLREEVQFGRASRKKVVAAAEQQTYNLLHLSLFREYLAYEFAPLAVPGALSFPFDLERVIDDYVLMGFLVGNDFIPHVPHFHIDTGALAFLIESYKQVMPTLDGYLNDCGKIDLVRMEKFLGGAGRYDFELFEDRVLDLKYLEGGNGRRGGGGGGRGGRGGHGGRDRANRGGGASPAVRKKGLSASPSPTPATQDAGRAGVAADGSVPAGFGLFGPGDGIDGTILEEDATADEDDEQAPPPSLVDALAKTVPPEKETLLREEFEMTKREYYREKFGLEPTPAFVAALCRDYVVGLQWVLLYYHAGVQSWGWFYPHHYAPHVSDIRHFAHEPIHLELGKPFRPFEQLLGVLPAASARFLPEPYRGLMTSADSPILDFYPKSFKADLNGKKNDWEAVVLIPFIEEKRLLDAMRDPGTRLTAEERMRNEFGADIVYSYDSAAKASFPSPSSKVTPLADAPVRMDALPDYCTQEYPLKRGLLAGVKTDVYFPGFPTLKHIEHVVELRMAGVNVFQQPSRGENMILTLTEKNMAEQTAAAVSERYLGKSVHVGWPHLKEALVVGVEDEKERYRLTPPTRDRKASSLRTPQSKQTLGFFWAAVEEAQYNLQDKQGIIIGTTRVILRVRLAAGSRTFFQNNVVEQVTQWSDEEISVAYQVVVRDLVMLSAAVQTIEDHFPVGSKAFYLGSPSYGCEATVVRHNAATGRLDVKLTVVNDDRAAATAQFIAQQATERYLPAHAVAKQCGISGRNVARVTASMVVDKPNNQRANIGLNLRYHKKDQQALGYARRKEDNTWEYSAAAVAALKAYKTRFPEMFARLESLADPDRNLAESDLFPLSTGETIADVQAYMKTIDCNNASLVPCGSKVMSSEAVRALEMHVIQNGGQLGQGSREAVIKDVMPFLLHRGYESNDSLPDPAATFELGDRVVCVDGDNGVTVGTRGFVVAVYGSPPDKLEVLWDSVWPGGNTLAGKCTTARGGTTLATGVINVSFGVRKSSTGSSASQAAPVRILGQQQYQPPQPSQPQQSQPQQSQPQQSQPQQSQPQQSQPQQSQPQQSQRQPHRQAQELRHIPPKQQQFLPPQLQKQAKPRSPAPALPSPALPSPSPSTPGSDPLSESNQLMFFDPSRAPLRSPSAAGSVAGSSAASPIPSPAPFVRDRDLPSTSPLLAKSGDQPVFGAVSTTAPAGMQVQPSSAGTAAPAVPLQVQQLFAMAGAMQQPGTQFYGAPVGVAAPHPHPHAPHVPLKYPGGAPVYPFAPAFGLPPGAPYVGHGGSFPAMHGGAPLDLNDPSFPPPPPVIPSSGPFPGQPMSLMASPRPPRGAPGLDETFALLQLQSATIGIPSPTPNRTPAKQQHKGGQPQKGAQSAGGEQGQVQGQGQPRQQRHQVQQKPLQRQKSAGNASLSETFGMAAEAPVVAATAPKDGEYSWQQLQLMGITRDGARVPAGSPAQQQPRQPIGQALVQPQGQQQQARRKKASKGSAQGQGQGQGDINPNGDGLPAHMDPLSGGSGGAAPKKPRQPRQPRNKGSQSVPGGGKSSEPSVSNAGGDGSGTEAVDMQGGLNWQQKQLLNM* # PASA_UPDATE: g9412.t1, single gene model update, valid-1, status:[pasa:asmbl_8366,status:12], valid-1 NODE_592_length_20506_cov_39.9037 . gene 3764 10263 . - . ID=g9412;Name=g9412.t1 NODE_592_length_20506_cov_39.9037 . mRNA 3764 10263 . - . ID=g9412.t1;Parent=g9412;Name=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 10254 10263 . - . ID=g9412.t1.exon1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 10254 10263 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 9914 10009 . - . ID=g9412.t1.exon2;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 9914 10009 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 9704 9801 . - . ID=g9412.t1.exon3;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 9704 9801 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 9394 9460 . - . ID=g9412.t1.exon4;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 9394 9460 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 9088 9197 . - . ID=g9412.t1.exon5;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 9088 9197 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 8779 8844 . - . ID=g9412.t1.exon6;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 8779 8844 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 8491 8596 . - . ID=g9412.t1.exon7;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 8491 8596 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 8161 8288 . - . ID=g9412.t1.exon8;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 8161 8288 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 7887 8004 . - . ID=g9412.t1.exon9;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 7887 8004 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 7540 7691 . - . ID=g9412.t1.exon10;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 7540 7691 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 7100 7244 . - . ID=g9412.t1.exon11;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 7100 7244 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 6827 6930 . - . ID=g9412.t1.exon12;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 6827 6930 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 6600 6679 . - . ID=g9412.t1.exon13;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 6600 6679 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 6045 6313 . - . ID=g9412.t1.exon14;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 6045 6313 . - 1 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 5644 5847 . - . ID=g9412.t1.exon15;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 5644 5847 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 5232 5416 . - . ID=g9412.t1.exon16;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 5232 5416 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 4765 5014 . - . ID=g9412.t1.exon17;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 4765 5014 . - 0 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . exon 3764 4312 . - . ID=g9412.t1.exon18;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . CDS 4113 4312 . - 2 ID=cds.g9412.t1;Parent=g9412.t1 NODE_592_length_20506_cov_39.9037 . three_prime_UTR 3764 4112 . - . ID=g9412.t1.utr3p1;Parent=g9412.t1 #PROT g9412.t1 g9412 MASFNVLVVGSGGREHALAWKLAKSPLASIVFVAPGNGGTETAGGKIKNVAIAAGKFEDLIVFSKQNNVGLVVVGPEQPLVDGIVAAFKGVGIPVFGPSAKAAQLEASKAFSKEFMRRHGIPTAAFQVFTDFAKACDYVRAFPGKVVIKASGLAAGKGVVLPQTVDEAIAVLSEMMVAKAFGDAGLEVVIEELLEGPEVSLFALTDGYTVVPLPPLQDHKRIFDNDQGPNTGGMGAYSPVPFITETEVKSIIKTVVKPTVDGLRREGTPYVGLLYTGLMMTPNGPRVLEYNCRFGDPETQAVVPLFADDCDLAAVMLACAEGRLDSVAVSVRSDCASITVVAAAQGYPQSPVTGQAISLPSDLPEGVNIFHAGTKRNADGSLVTSGGRVLAVTAVGKDVQDAVTKAYDVMARVSFEGMQYRKDIAKKALDALAGGKRGTTYADAGVSIEEGDRLVELIKPYAKATRRTGCDADLGGFGGLFDMKPVGFVDPVLVSGTDGVGTKLRIAQIVGKHDTIGIDLVAMCVNDIIVQGAEPLFFLDYYATGHLEVPVARDVVKGIAQGCKDSGCALVGGETAEMPGMYQPGHYDLAGFAVGACERTQLLPRNDIGAGDIILGLPSSGVHSNGFSLVRHLVEKSGLEYSSPCPFDGFPAGTTLGEAFLTPTKLYVLPLLPAIRSGLVKGLAHITGGGIVENVPRVLPEGVSAVTDATAWPLPPMFRWLKQQGQVADAELARTFNCGIGMVVIVAPQHVTAVTALLEAGGESVHVIGHLEPRSPDGVAKGEHTVVINTDKAWN* # PASA_UPDATE: g9415.t1, single gene model update, valid-1, status:[pasa:asmbl_8368,status:12], valid-1 NODE_592_length_20506_cov_39.9037 . gene 19237 20413 . - . ID=g9415;Name=g9415.t1 NODE_592_length_20506_cov_39.9037 . mRNA 19237 20413 . - . ID=g9415.t1;Parent=g9415;Name=g9415.t1 NODE_592_length_20506_cov_39.9037 . five_prime_UTR 20327 20413 . - . ID=g9415.t1.utr5p1;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . exon 20258 20413 . - . ID=g9415.t1.exon1;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . CDS 20258 20326 . - 0 ID=cds.g9415.t1;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . exon 19859 20038 . - . ID=g9415.t1.exon2;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . CDS 19859 20038 . - 0 ID=cds.g9415.t1;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . exon 19237 19581 . - . ID=g9415.t1.exon3;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . CDS 19453 19581 . - 0 ID=cds.g9415.t1;Parent=g9415.t1 NODE_592_length_20506_cov_39.9037 . three_prime_UTR 19237 19452 . - . ID=g9415.t1.utr3p1;Parent=g9415.t1 #PROT g9415.t1 g9415 MVIGDKRKFLTCLVTLKVEADGEGHPTDKLTSLAIADLQKIGFKGTSAAEACNDKGVLAAIEKGIIRANKRAVSRAQNVQKFKAIPRDFSVNGGELGPTLKLKRHTVLQIYSAEIEALYADGGAE* # PASA_UPDATE: g9414.t1, single gene model update, valid-1, status:[pasa:asmbl_8367,status:3], valid-1 NODE_592_length_20506_cov_39.9037 . gene 14922 18240 . - . ID=g9414;Name=g9414.t1 NODE_592_length_20506_cov_39.9037 . mRNA 14922 18240 . - . ID=g9414.t1;Parent=g9414;Name=g9414.t1 NODE_592_length_20506_cov_39.9037 . five_prime_UTR 18172 18240 . - . ID=g9414.t1.utr5p1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . five_prime_UTR 17942 17952 . - . ID=g9414.t1.utr5p2;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 18172 18240 . - . ID=g9414.t1.exon1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 17903 17952 . - . ID=g9414.t1.exon2;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 17903 17941 . - 0 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 17731 17796 . - . ID=g9414.t1.exon3;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 17731 17796 . - 0 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 17438 17510 . - . ID=g9414.t1.exon4;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 17438 17510 . - 0 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 16876 17138 . - . ID=g9414.t1.exon5;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 16876 17138 . - 2 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 16411 16575 . - . ID=g9414.t1.exon6;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 16411 16575 . - 0 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 16005 16108 . - . ID=g9414.t1.exon7;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 16005 16108 . - 0 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 15631 15774 . - . ID=g9414.t1.exon8;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 15631 15774 . - 1 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . exon 14922 15291 . - . ID=g9414.t1.exon9;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . CDS 15132 15291 . - 1 ID=cds.g9414.t1;Parent=g9414.t1 NODE_592_length_20506_cov_39.9037 . three_prime_UTR 14922 15131 . - . ID=g9414.t1.utr3p1;Parent=g9414.t1 #PROT g9414.t1 g9414 MAGVKKFFNKANQWAAEKTGAEKTVLEEEFVSMEKRTDATEKALKALIDKTQEYLQPNPTARAKFTVKQTLGSKPGKYPQPEGDLGDALIKHGKAIGEDCVLGHAMVVTGESEKQIAEARDALDAEVQANFLKPLEDFLGKEVKDVMFHRKKLESRRLDFDYKRRQRAKDPKMEEETRVAEQKFEESKEASWNGMQNIIANEAEQVSQVHALVEAQLQFHRQSVNILGGLAEQLRDLVQESASQPRSQRKYERQAHSYDDDLGSGGAPVSSHAPPPASRGSAGQGCRALYDFQAENPGELTFREGDLINVRGRLDENWLEGECHGQVGMFPASYVNY* # PASA_UPDATE: g9411.t1, single gene model update, valid-1, status:[pasa:asmbl_8365,status:3], valid-1 NODE_592_length_20506_cov_39.9037 . gene 430 3709 . + . ID=g9411;Name=g9411.t1 NODE_592_length_20506_cov_39.9037 . mRNA 430 3709 . + . ID=g9411.t1;Parent=g9411;Name=g9411.t1 NODE_592_length_20506_cov_39.9037 . five_prime_UTR 430 557 . + . ID=g9411.t1.utr5p1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . exon 430 1171 . + . ID=g9411.t1.exon1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . CDS 558 1171 . + 0 ID=cds.g9411.t1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . exon 1332 1460 . + . ID=g9411.t1.exon2;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . CDS 1332 1460 . + 1 ID=cds.g9411.t1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . exon 1701 1818 . + . ID=g9411.t1.exon3;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . CDS 1701 1818 . + 1 ID=cds.g9411.t1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . exon 2063 2902 . + . ID=g9411.t1.exon4;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . CDS 2063 2902 . + 0 ID=cds.g9411.t1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . exon 3089 3709 . + . ID=g9411.t1.exon5;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . CDS 3089 3214 . + 0 ID=cds.g9411.t1;Parent=g9411.t1 NODE_592_length_20506_cov_39.9037 . three_prime_UTR 3215 3709 . + . ID=g9411.t1.utr3p1;Parent=g9411.t1 #PROT g9411.t1 g9411 MGCAPSKSNAIDPAASWNAPTTQVVQASGVTILVPQASVPVPAVGPPPVPITVGSAQAYNPPPPAHVVTVPHVPMPVEGGPIVQYAGDIPRPPSTHSARGSITGIESYPPAQATQQQRPPSTHSRRSDGQNSLGTDGMPPRGASRSSLAGKGSRLEECAKLEARILDLESRNISSDYSVAQARVAHYDRQLAAAAERIRELENQAMSEYIDVVRFLGPSTETAMVHLSGHAQQQFEREQWEYVTALNRLEIAKHETDKLVAARTQLAQDMQAMWLDMGQLRQLYEAQDSLLGRFNGVVQPDGCPYSTAEWRMEMESEQLAETVSFVARAKCQWDTVFLLLSSAHGYLDDAARHLESAQIAPSHGPIAAARSLVADAVADMSLALSYIPVENLPGLTTANIDQLNGLTISIFQHYFDPAVLRADAETISAASASVFTAMQWAGNMIRDVIVPDVQKAEERYVRKREKLMEERRNVVARAETQASLGAELSARTGSVLSMNLARDDDGDLARAGSSMSMREEFDAQSDSRRGSQQTVLPPKPTREQLYGDIEGLRRRHAEERAELDRAKETNKARQEVALREKLVQKRLKRIMVEAEQTGSPKARSKATV* # ORIGINAL: g9413.t1 original gene structure, not modified by PASA NODE_592_length_20506_cov_39.9037 AUGUSTUS gene 10734 14316 . + . ID=g9413;Name=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS mRNA 10734 14316 . + . ID=g9413.t1;Parent=g9413;Name=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 10734 10736 . + . ID=g9413.t1.exon1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 10734 10736 . + 0 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 10930 11100 . + . ID=g9413.t1.exon2;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 10930 11100 . + 0 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 11257 11635 . + . ID=g9413.t1.exon3;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 11257 11635 . + 0 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 11980 12108 . + . ID=g9413.t1.exon4;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 11980 12108 . + 2 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 12303 12390 . + . ID=g9413.t1.exon5;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 12303 12390 . + 2 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 12529 12748 . + . ID=g9413.t1.exon6;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 12529 12748 . + 1 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 12959 13379 . + . ID=g9413.t1.exon7;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 12959 13379 . + 0 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 13582 13833 . + . ID=g9413.t1.exon8;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 13582 13833 . + 2 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 13973 14058 . + . ID=g9413.t1.exon9;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 13973 14058 . + 2 ID=cds.g9413.t1;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS exon 14203 14316 . + . ID=g9413.t1.exon10;Parent=g9413.t1 NODE_592_length_20506_cov_39.9037 AUGUSTUS CDS 14203 14316 . + 0 ID=cds.g9413.t1;Parent=g9413.t1 #PROT g9413.t1 g9413 MGKKRFIDKKNAVTFQVVHRSQRDPLQADEESSKRVLVPLGHKGSSFALPDGVEPGDEDQYCDDDDSEYTSDDGEDDGEGSRTEGSGVRSSKGKERASTHAPKGGNNEFLKKSEYAENGIFYDDDYDYSQHLKPIGKQPDATFVESAKAPKKIIVGKGVSLPADIFASDREDAIGLLNRAAPTSGPQLDLDPEILAAMEEAENADDPEADFGLEEDFVAMALTEAEDGASYDVGASHNVKAGKDEYMRSLGFGGGKSGSDDEYDDVESGDDDADSGDDAEEDDGFDEDPSKLRRRFGNEETRSRFTEYSMTSSVIRRTEGLMLLDDRFEQLMAEYDEEEIGPLDSEDPGVQGLTTDMTKFDKIFDDFIEQRSIVKLEDAIKGVSASDRKLILERQKERHLAAMKRAGLDTSSKTVVFTPEDSKKADKFGNTVVEEGAQDEESDGDDERGAMPERFVIEPKPDKWDCESILSTYSNLYNHPKLITEPSNGRKRMPKQGSADASGDVPVTPTIRLSAKTGIPLGVLPSREAKGHNAKESGDSEGDDDEDGDDDGRGGENLGVARPKQETAEERKLRKQAVKAERRDRRVVKKATKEVFKKEELRQEQDALSRKANASVKIAL* # ORIGINAL: g3529.t1 original gene structure, not modified by PASA NODE_3701_length_2926_cov_35.4184 AUGUSTUS gene 579 2867 . + . ID=g3529;Name=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS mRNA 579 2867 . + . ID=g3529.t1;Parent=g3529;Name=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS exon 579 2193 . + . ID=g3529.t1.exon1;Parent=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS CDS 579 2193 . + 0 ID=cds.g3529.t1;Parent=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS exon 2303 2643 . + . ID=g3529.t1.exon2;Parent=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS CDS 2303 2643 . + 2 ID=cds.g3529.t1;Parent=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS exon 2805 2867 . + . ID=g3529.t1.exon3;Parent=g3529.t1 NODE_3701_length_2926_cov_35.4184 AUGUSTUS CDS 2805 2867 . + 0 ID=cds.g3529.t1;Parent=g3529.t1 #PROT g3529.t1 g3529 MYSSYFDLIGAPPKPSLESLAESLLEQRGINNEFVADFNKFLDSESNEWMRWFDPMALGSFGKIAKEWRLKTGLTTEIKEAPIDFNELTAVGQKGALEAFVEVWPNFFKGATKTQRGENEQAVKQYVNWMIKERGPAAYNPLAMNKSPDFVQELEKEWNKIVGVSTYGEFFTTYEDLLARVVRRTRERKLYGTPRGLLFKLPNHLWVLDCCGADGNSSLAGLAGGSSLAGLARGRFGGCPSLAGGGVSSLAGCSSMTGGCSFMAAGGVGGNGRGSAGKSGSPVAPRRCAELESDGWPKNAARNYLVNCSAVFYDQPDEDTSAFLKMGGKKFLGGQFRWKRDSRLNFRVELWNGSMVITTFEIKVNELIVPMDARVYDPMFRLIKSIRPPFQRSLLTLKNLLKDYEDYAVLIWAQPRPRMELHAFAWNYEPPRIGEADEGVGYCVWGPCLYNVLRQAEDGKTELNRKFVSMEAGKTIVRSNMPCKPPDSCMLVVVTELDTCLGEDLPEPEDEPLEDSDDESRSSRGVKEGEEILSRHGRVIVDNNAVSDCGRFFVSMPGTQPGAQPGAQPGTQPGAQPGAQPGAQPGAQPGAQPGAQPGAQPGAQPGAQPGAQPGTQPGAQPSLPNIDPATLGLGADFNAYVFPQGQPNGIYDAVLFLEVLLWPGNSVYVRGP* # PASA_UPDATE: g2192.t1, single gene model update, valid-1, status:[pasa:asmbl_4978,status:12],[pasa:asmbl_4979,status:12], valid-1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . gene 133 5002 . + . ID=g2192;Name=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . mRNA 133 5002 . + . ID=g2192.t1;Parent=g2192;Name=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . five_prime_UTR 133 410 . + . ID=g2192.t1.utr5p1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 133 430 . + . ID=g2192.t1.exon1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 411 430 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 683 814 . + . ID=g2192.t1.exon2;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 683 814 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 1011 1071 . + . ID=g2192.t1.exon3;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 1011 1071 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 1620 1667 . + . ID=g2192.t1.exon4;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 1620 1667 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 1912 2087 . + . ID=g2192.t1.exon5;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 1912 2087 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 2303 2437 . + . ID=g2192.t1.exon6;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 2303 2437 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 2673 2774 . + . ID=g2192.t1.exon7;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 2673 2774 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 2858 2930 . + . ID=g2192.t1.exon8;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 2858 2930 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 3043 3168 . + . ID=g2192.t1.exon9;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 3043 3168 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 3571 3701 . + . ID=g2192.t1.exon10;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 3571 3701 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 3883 4054 . + . ID=g2192.t1.exon11;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 3883 4054 . + 1 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 4383 4440 . + . ID=g2192.t1.exon12;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 4383 4440 . + 0 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 4545 4633 . + . ID=g2192.t1.exon13;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 4545 4633 . + 2 ID=cds.g2192.t1;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . exon 4820 5002 . + . ID=g2192.t1.exon14;Parent=g2192.t1 NODE_2773_length_5163_cov_38.9163_potentialcontaminant . CDS 4820 5002 . + 0 ID=cds.g2192.t1;Parent=g2192.t1;3_prime_partial=true #PROT g2192.t1 g2192 MALPLLRAREAEHLTSLIDNAAKRMAVRAATMRSIAMELVDAASALVDSPRGFVCFRIETEKAIQGDRTYENIVSQHFMSFRIMYSEAFFEDESMHTTRELTSFPASVSPADLASWVLSTGMYAEGADGVPVQCGATGGYACVPFSVDDKVAGVVGWYGREGGYHDVISTLFSVADAVGKARTVDLNTLSRVVQLSSRPVHEREGRLLHVIAKVQADFLYGDFNRFDLFMILLNELIDLTESEYGFIGEVMKTPDGHLFASTWACTNIGWNEATRTWYKEGHQTGLRVYKELSLYGPVLKGETVISNDVATDPRSTGRPKAHPPLNRFCGIPVVKPNGEVLGICALANSATGYCDSLTQFLHPFMMTFGAMIESTRNRDARDKAEKELKAAKERAEEYATIKSRILNNTSHELKTPLNAIHGLTELALIAEVAPQVRGYLEAIRASASALMYTVNQMLDFSRINTTSTVENAAAEFSLHELFDGLAEELTPMVWERGLGLLM # ORIGINAL: g3630.t1 original gene structure, not modified by PASA NODE_3207_length_4015_cov_40.4761 AUGUSTUS gene 143 1964 . + . ID=g3630;Name=g3630.t1 NODE_3207_length_4015_cov_40.4761 AUGUSTUS mRNA 143 1964 . + . ID=g3630.t1;Parent=g3630;Name=g3630.t1 NODE_3207_length_4015_cov_40.4761 AUGUSTUS exon 143 319 . + . ID=g3630.t1.exon1;Parent=g3630.t1 NODE_3207_length_4015_cov_40.4761 AUGUSTUS CDS 143 319 . + 1 ID=cds.g3630.t1;Parent=g3630.t1 NODE_3207_length_4015_cov_40.4761 AUGUSTUS exon 665 1964 . + . ID=g3630.t1.exon2;Parent=g3630.t1 NODE_3207_length_4015_cov_40.4761 AUGUSTUS CDS 665 1964 . + 1 ID=cds.g3630.t1;Parent=g3630.t1 #PROT g3630.t1 g3630 GTSQCRGSFVYYDDDHAATLVFSKQQGIALRVACIVDACMSPSVGKKEEAILARNGCKSSMLGGAPQWLKKHVCNALRYVESERTALLDALTHAQVTPLAPTSDPSSHAPANQCNPSPGTNPSNSSPGTNPSPDQREPPQTVANGVYLRRIQSLAIVCDKTRHFLHEQKASASSRSKDGSHAATPSQSPASIPLAPPPLCVLSEADSLMHMWDESGSVVSRLVDALAPLHPGASADIASIAREAKVKAIPAASSSPASSASTTRASEADALSRALMMRVAQRLVMVGSECPGIRGGAWAAAVATVLHAHTRIRFIPNGKLRGFKSKHAEVGRIATGRDDGVIVCKSYGAEYALAQLAMWHKDSASNVESLFHKGSRGWVALPDPSACIAPDSATRMAFKVAPLCTVADVDAFATAIGGDWARDHPFPPLCHAPAWVWSNKARAVPLGSPFVDAAATGGALLDGMAAECTGARVAVSAVALAIRTLFAEAAC* # PASA_UPDATE: g3631.t1, single gene model update, valid-1, status:[pasa:asmbl_5718,status:12], valid-1 NODE_3207_length_4015_cov_40.4761 . gene 2169 3268 . - . ID=g3631;Name=g3631.t1 NODE_3207_length_4015_cov_40.4761 . mRNA 2169 3268 . - . ID=g3631.t1;Parent=g3631;Name=g3631.t1 NODE_3207_length_4015_cov_40.4761 . exon 2169 3268 . - . ID=g3631.t1.exon1;Parent=g3631.t1 NODE_3207_length_4015_cov_40.4761 . CDS 2552 3268 . - 0 ID=cds.g3631.t1;Parent=g3631.t1 NODE_3207_length_4015_cov_40.4761 . three_prime_UTR 2169 2551 . - . ID=g3631.t1.utr3p1;Parent=g3631.t1 #PROT g3631.t1 g3631 MDVNSSASPRPSTGHPWMAPIASRFREYRAREPSDTTGLNSLVAGEASVLIPLFAGPNGEGDLRVLLTRRNASMRSHGGEVAFPGGKRDDVDADAVATALREAHEEVGLPPSCVEVLGTLEVLVSKHKLKVTPVVAMIPAGFVPTANPDEVDAVFDAPLDLFLGAEKHSFIDILWLGHDVRMHMFEHGEFNIFGLTALFLIQAAEIAYGRAAEFELTAPGTTPFRELFYKQQDAKSNM* # ORIGINAL: g5420.t1 original gene structure, not modified by PASA NODE_1686_length_9736_cov_39.6998 AUGUSTUS gene 418 769 . + . ID=g5420;Name=g5420.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS mRNA 418 769 . + . ID=g5420.t1;Parent=g5420;Name=g5420.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 418 769 . + . ID=g5420.t1.exon1;Parent=g5420.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 418 769 . + 1 ID=cds.g5420.t1;Parent=g5420.t1 #PROT g5420.t1 g5420 PRAVQTSTQVSFVTDFAAFVAPLRCIYSLHDPIPLQRFTLDESLGRQNLYLRGNEARLLRYVPKIIHVAARSLNARVLAAKGSRRSREMVATVFGSFSDDWVAENATKIHDLKVGG* # ORIGINAL: g5421.t1 original gene structure, not modified by PASA NODE_1686_length_9736_cov_39.6998 AUGUSTUS gene 1551 6254 . - . ID=g5421;Name=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS mRNA 1551 6254 . - . ID=g5421.t1;Parent=g5421;Name=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 6207 6254 . - . ID=g5421.t1.exon1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 6207 6254 . - 0 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 4833 5979 . - . ID=g5421.t1.exon2;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 4833 5979 . - 0 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 4154 4381 . - . ID=g5421.t1.exon3;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 4154 4381 . - 2 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 2783 3880 . - . ID=g5421.t1.exon4;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 2783 3880 . - 2 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 2418 2455 . - . ID=g5421.t1.exon5;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 2418 2455 . - 2 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 2032 2103 . - . ID=g5421.t1.exon6;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 2032 2103 . - 0 ID=cds.g5421.t1;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 1551 1715 . - . ID=g5421.t1.exon7;Parent=g5421.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 1551 1715 . - 0 ID=cds.g5421.t1;Parent=g5421.t1 #PROT g5421.t1 g5421 MHSDRVWPRAIFWRNWVGLFILGTVNNIAYVIVNSAAESVSESFNAKNLLGFIPWANVAFGFLSRSLNTLFLQNSRYSLRMIGNSIAMAAGLLGLAFAPNFPFALAAVALVGMACSFGESVVLGYLKLFPPELVNGWSSGTGMAGVGGAGLYLAYNGAGLSDKVSFLLTLPFIALYLIGFFIVIKIPADSSYGSTDKKGEPTERTRLLGTEGVDAHLAESASTSVESVTVKVGRGQSSADASRVPLLGDSYDPYQDDGAIAVDDGVAAPTTAPQATQTPYQKETGSIELAAGVVETEEIAATESLETSDETTVQRYIRCIKLGGWLSFNLAAVYFFEYVVSGGCAAKVITEDEKNSGDWWRRHAYEIFSLCYQIGVFISRSSLQLFKIERVEILTVLQGINFAFWVAEARYKFIPAQYDVWILFPLMIYVGLLGGASYVNVFYLLLNKEDIPQKDRELCINLSAIAINFGITFGCRTMDEASHSEGLAELALGLHIDAPPQGDATGVTAPPQEMAMNSSSTAAARMKAYDNDHNNDISMEGMITACLPSIWSAGDGYGGGGGGGGGSSALSPAVDPTVNAPTLSSPRGSATSSRNNTTAWSCVGPQILPVFDDGGVTPQSIAELRSAPDVMDARRGFGFILAHKTCYDLLPDSGKIVVFDTALLVKKAFFALVQNGIRSAPLWDSRLRKFVGMITITDFINILRRYYRSPLVTMDELEEHKIQTWREMCSLPDDVISIEPSATLKEAVRILIDSKIHRLPLIDSVTGSAVAILTHKRVLGYLHPIFMENPPAAFQKHSIYELGIGTYRNIATASRDMPLIIVLNVFHERRVSAVPIVDESGVVVDVYAKFDVMNLARERAYNNLDVSVKEALLHRPEVSDGLHTCLKTDNLMTIIDRIVRAKVHRLIVIDSTRRVVGIVSLSDILGFLLVN* # ORIGINAL: g5422.t1 original gene structure, not modified by PASA NODE_1686_length_9736_cov_39.6998 AUGUSTUS gene 7157 9018 . + . ID=g5422;Name=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS mRNA 7157 9018 . + . ID=g5422.t1;Parent=g5422;Name=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 7157 7506 . + . ID=g5422.t1.exon1;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 7157 7506 . + 0 ID=cds.g5422.t1;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 7913 7993 . + . ID=g5422.t1.exon2;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 7913 7993 . + 1 ID=cds.g5422.t1;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 8333 8451 . + . ID=g5422.t1.exon3;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 8333 8451 . + 1 ID=cds.g5422.t1;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 8717 8820 . + . ID=g5422.t1.exon4;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 8717 8820 . + 2 ID=cds.g5422.t1;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS exon 9007 9018 . + . ID=g5422.t1.exon5;Parent=g5422.t1 NODE_1686_length_9736_cov_39.6998 AUGUSTUS CDS 9007 9018 . + 0 ID=cds.g5422.t1;Parent=g5422.t1 #PROT g5422.t1 g5422 MSSSASGRPSSGKTGRPSSSTSRKSTKSSKSQHSQQIHQTHQQVREAMIRELTAKGVDIRKPPTVQFGSFAENLRKRAFGTVSCQMFCGGRSCKYCIGAGWDKRNPDNAFAGLYSNWVTPHVLAMARPSTQGMKDYGLIKQFKKAGITSVINLQEPFEHASCGVGVDQDCGFSYHPTEFMNAGIYFYNFGWKDLHAPTLQSMLDMVKVLAFTLDNGGKLRL* # PASA_UPDATE: g10090.t1, single gene model update, valid-1, status:[pasa:asmbl_5776,status:3], valid-1 NODE_3249_length_3918_cov_34.6838 . gene 101 2094 . - . ID=g10090;Name=g10090.t1 NODE_3249_length_3918_cov_34.6838 . mRNA 101 2094 . - . ID=g10090.t1;Parent=g10090;Name=g10090.t1 NODE_3249_length_3918_cov_34.6838 . five_prime_UTR 2017 2094 . - . ID=g10090.t1.utr5p1;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . five_prime_UTR 1780 1891 . - . ID=g10090.t1.utr5p2;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . exon 2017 2094 . - . ID=g10090.t1.exon1;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . exon 935 1891 . - . ID=g10090.t1.exon2;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . CDS 935 1779 . - 0 ID=cds.g10090.t1;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . exon 101 614 . - . ID=g10090.t1.exon3;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . CDS 377 614 . - 1 ID=cds.g10090.t1;Parent=g10090.t1 NODE_3249_length_3918_cov_34.6838 . three_prime_UTR 101 376 . - . ID=g10090.t1.utr3p1;Parent=g10090.t1 #PROT g10090.t1 g10090 MAAARNGRHTLEVCRTVRAACMGTAPVRHHSTTRPCCAAPTPDVANVFDRASKRRQRERALVSPEVSSFDYLRDEVAARVVDRMLDISRRFSVVADVGSGSGFVGRHLTGDLAELLIECDPCMGALRRSRSEQPLHTAKKDEERPRPPRLRVAGDEEFLPLGDNTVDAVLSSMSLHWVNDLPGTLSQMRRCLKPDGVFLGAMLGGDTLMELRSALQVAETERFGGLAPHVSPFANVSDAGNLLSRAGFAITTVDIDQITINYPGPVDLMLDLKGMGEQNAAWTRAQFLRRDTLVAMEPIYRALYGNPDGSVPATFQIIYLIGWKPDPSQKKPAKRGSGTVPLASIGEGGGGASGGGQCGR* # ORIGINAL: g10091.t1 original gene structure, not modified by PASA NODE_3249_length_3918_cov_34.6838 AUGUSTUS gene 2467 3335 . + . ID=g10091;Name=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS mRNA 2467 3335 . + . ID=g10091.t1;Parent=g10091;Name=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS exon 2467 2574 . + . ID=g10091.t1.exon1;Parent=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS CDS 2467 2574 . + 0 ID=cds.g10091.t1;Parent=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS exon 2755 2834 . + . ID=g10091.t1.exon2;Parent=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS CDS 2755 2834 . + 0 ID=cds.g10091.t1;Parent=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS exon 3119 3335 . + . ID=g10091.t1.exon3;Parent=g10091.t1 NODE_3249_length_3918_cov_34.6838 AUGUSTUS CDS 3119 3335 . + 1 ID=cds.g10091.t1;Parent=g10091.t1 #PROT g10091.t1 g10091 MADSSGRLGTAAARAVGGEPADVAALVDLCELLELDESISPLCTAPTSVYGYMLTGLLLLGDIHNARMVWKRIPSSARDAAPELRVLWAIGQQLWHRERAAAAASLRSYAWPAHLQPLLNLLLGGRQFVSVVHT* # PASA_UPDATE: g10869.t1, single gene model update, valid-1, status:[pasa:asmbl_4890,status:3], valid-1 NODE_271_length_28602_cov_42.145 . gene 14184 18675 . + . ID=g10869;Name=g10869.t1 NODE_271_length_28602_cov_42.145 . mRNA 14184 18675 . + . ID=g10869.t1;Parent=g10869;Name=g10869.t1 NODE_271_length_28602_cov_42.145 . five_prime_UTR 14184 14318 . + . ID=g10869.t1.utr5p1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . five_prime_UTR 14455 14482 . + . ID=g10869.t1.utr5p2;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 14184 14318 . + . ID=g10869.t1.exon1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 14455 14542 . + . ID=g10869.t1.exon2;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 14483 14542 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 14782 14833 . + . ID=g10869.t1.exon3;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 14782 14833 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 15066 15265 . + . ID=g10869.t1.exon4;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 15066 15265 . + 2 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 15610 15705 . + . ID=g10869.t1.exon5;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 15610 15705 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 16005 16176 . + . ID=g10869.t1.exon6;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 16005 16176 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 16463 16569 . + . ID=g10869.t1.exon7;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 16463 16569 . + 2 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 16908 16992 . + . ID=g10869.t1.exon8;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 16908 16992 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 17196 17373 . + . ID=g10869.t1.exon9;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 17196 17373 . + 2 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 17602 17645 . + . ID=g10869.t1.exon10;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 17602 17645 . + 1 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 17879 18057 . + . ID=g10869.t1.exon11;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 17879 18057 . + 2 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . exon 18330 18675 . + . ID=g10869.t1.exon12;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . CDS 18330 18374 . + 0 ID=cds.g10869.t1;Parent=g10869.t1 NODE_271_length_28602_cov_42.145 . three_prime_UTR 18375 18675 . + . ID=g10869.t1.utr3p1;Parent=g10869.t1 #PROT g10869.t1 g10869 MSEDAFAKKPHDVARSQKFFRAFLAIGMLATGTCNTIMTKLQDRISTPTGVNGTEEVFDHPYFQTYTMFIGEFLCIFAYIISFKYQMRQSLRGYSAINGEAPPPPPKKSNHPWWVFIIPTCCDLTATTLMNVGLTYTSTSVYQMLRGAMVFFTALFSIIFLRRRLHFQHWFGLVWIVAGIAIVGAASVIFGEEDSHSKNPVLGNVLVIAAQVIVATQFVVEEKLLSKYEVPSLCAVGNEGFWGVVILTCVLPILQVIHVNSHPVEDSLNALDQMGDSWKLNVAIFGSVISIAFFNYFGISVTKFLSATHRCTIDSCRTLFIWAITLLLGWEKFIWLQLIGFAVLVFGTFSYNHVFVIPRRWIDKLSFKLTFLPAVCWEVEGETEHHSLSEETQPLVSTETVEVGK* # PASA_UPDATE: g10867.t1, single gene model update, valid-1, status:[pasa:asmbl_4889,status:3], valid-1 NODE_271_length_28602_cov_42.145 . gene 87 7368 . + . ID=g10867;Name=g10867.t1 NODE_271_length_28602_cov_42.145 . mRNA 87 7368 . + . ID=g10867.t1;Parent=g10867;Name=g10867.t1 NODE_271_length_28602_cov_42.145 . five_prime_UTR 87 174 . + . ID=g10867.t1.utr5p1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . five_prime_UTR 380 1117 . + . ID=g10867.t1.utr5p2;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 87 174 . + . ID=g10867.t1.exon1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 380 1174 . + . ID=g10867.t1.exon2;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 1118 1174 . + 0 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 1472 2250 . + . ID=g10867.t1.exon3;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 1472 2250 . + 0 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 2646 2825 . + . ID=g10867.t1.exon4;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 2646 2825 . + 1 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 3156 3476 . + . ID=g10867.t1.exon5;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 3156 3476 . + 1 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 3611 3797 . + . ID=g10867.t1.exon6;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 3611 3797 . + 1 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 4069 5477 . + . ID=g10867.t1.exon7;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 4069 5477 . + 0 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . exon 5624 7368 . + . ID=g10867.t1.exon8;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . CDS 5624 7211 . + 1 ID=cds.g10867.t1;Parent=g10867.t1 NODE_271_length_28602_cov_42.145 . three_prime_UTR 7212 7368 . + . ID=g10867.t1.utr3p1;Parent=g10867.t1 #PROT g10867.t1 g10867 MGLLFLFLAFIVAATFYEQDPTKRVQLCRPHARLDLYDLFVRASLTILWNLLDSPSTHWVLVGALLFGSCTLAFAHIWFIPYTRWHFSVTKAVFSSIFAWSAVCLLFAMISNNPAYGEAYYMFFVVSPLVALCAIFLIGSRRRSLSATPTSKLRNAAELELKIRFHLEDNGLLFCRPEDDDTHAKEIYAEINRWYIESAKRWPESTLLPLFWGHFFLIYMKNKNMATTQFDRADTRKAHLDIRYVVYRRRTMMSDEFSSGSHDVIAFVEFQKFMADARRYHKKAARSQLDFWVELMQSSPDLHKLHTLSTQITRSVTSAQQSFTKLMKLNSTSSQLLRMYAGFQINVLNNTPYGDELLQMAEELENRRVDQVDEDGDGQLEHLNVLEDTNASVTISGQNKKEGDIVDVNTAACQLLGYRRSDLVGKNITLIIPHPYEIDHALHIRKYLETGIGAIVDKTRLVIVQHKSGAILPAFIMVKQVSRAGGVCFLGVIKPIKTSDHYVAIANDGVVMSCSASCVGLFGASMELVKNGAVNVTDWIPNFELDNPHDLVSVMQRPEDEAATILRVNTTPIEINGVAFHLLKVRSQIQGTTVQQSDSDQSFRNHAMPGAMVGSTRPKDGAGAHRPPIPEVPENDAAVPPLLAINGAGGEKGATQLANRRVHVTPSFHTNPEDSAAFELANAFTQGEEDEHAYTHIHASTYHGTHRYNADASAGKNVAHIMYEDEHGDAGGGMGPLPGALSAPPNASPMVRSATHISHTRPHVSMGPTLEINGAYHMKAGSRPFSRPSSPPIITEGDVNVEMTEVRHSQPDADAIASLGDEGVGFPRSKDNPSISRSDDSSFDADESGNKGRDNGSSHRMRPAFDESVKNTSEGNAPRKSRPSGGSSVKSGGSNTSGRSRMEQMRRQMFVGSSQSRSIESTRFLAAAATTVVVLSVLAIAGFIVVRSKMMDSDRTFISIAEASARQIEALRVAHIVRTLMLPDSVVGYHNKTQDQLLLRGQIATLRALHDALFQRGGSGSQAQGSLYMTPSTLFYTEQDGVGRSVQMSLADALEAFINKAYRVSMMPISAVDASSSDARVVYMNVFGALFASLAQSVELYQQSISDDVDTILGTAKGFTAGALSFLCFVTIFVLLPMLALIEVKRNRLVDLFMRIPISVVSALYDRTRQSLSDMEGLDAPDDDADFWAEAPSTTGEETSVVVVNGRRNQRRGDATHNHRARLISLLRMQKRGFIRILILVGLGLAFFIPYYVLCNDTMAGAVTISREIDLSDRRSFQARKTHFMVREMIVAGDHNSFNRMTALAENSIAVLTQVESALVYGNASFGLSTSALGSSGQPAILFGSACVPASPPSCTEYDSGFLTRGLHATILEFVDAGLDMVTSISQAANGSIIPASHQQTLLTLPRMSFLRDLDTDYLTPPIDACTSLYRQSKQGKVDSYDTTMLIILCVVVPSLVLYLLFVARPFVRQLDTEMMRTRMLLLMIPTDILRQIPGAENFLKKESRR* # ORIGINAL: g10871.t1 original gene structure, not modified by PASA NODE_271_length_28602_cov_42.145 AUGUSTUS gene 22327 28253 . + . ID=g10871;Name=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS mRNA 22327 28253 . + . ID=g10871.t1;Parent=g10871;Name=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 22327 23161 . + . ID=g10871.t1.exon1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 22327 23161 . + 0 ID=cds.g10871.t1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 23549 23655 . + . ID=g10871.t1.exon2;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 23549 23655 . + 2 ID=cds.g10871.t1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 23910 26119 . + . ID=g10871.t1.exon3;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 23910 26119 . + 0 ID=cds.g10871.t1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 26430 26572 . + . ID=g10871.t1.exon4;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 26430 26572 . + 1 ID=cds.g10871.t1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 26833 27410 . + . ID=g10871.t1.exon5;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 26833 27410 . + 2 ID=cds.g10871.t1;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 27675 28253 . + . ID=g10871.t1.exon6;Parent=g10871.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 27675 28253 . + 0 ID=cds.g10871.t1;Parent=g10871.t1 #PROT g10871.t1 g10871 MVDANTNNLASLFLKQAKLTPHNIALVEHVSEDERNSLTSSARLTTTEDAGPIGRSWTYASLRHDGLQVERAVRNAVAQLSKDTLVSGKDEQAEDERIDVGGAAVDPSSPPPHVIARPLVGIVMPRSASLVACILGTLTAECAYLPLNIAEYPKDYIRSVCDRTDLRLFIVPELSVSAFLGLLHVGDVVHAADNCNAQRVGWLRSRIEGIDGVVLLTATGKHLSSGSFVRGTSPGISSDLAYVMTTSGTTGVPKLIAVPHACIARNVVAFADKVLSGEGTDVVLLSSAPTFDPFVIELFAALSNGSTAVVISDAVKLNPIALVSCLALHRVTVVQATPSLLLRMGTDALLNHVLASTSHLRAVVLGGEPFPTLSALSEFWPSDSRVRLFNIYGTTECSSWASIMQISRNVLSEESRAAAALTMPTAGAGVAITVQASRATNIVYGAQHEAHCGTPNPPPPPVCCVVPEHITLSALAALGSAPLGVPFAWTELQVQSGDGCLLVRIAVPSTPECADAREGRYLARGCDRCVSVSAHVCWSRVTFSSAHRGEVSGNLWVGSPKRVCWVEGDVNGSHVLETGLRDTGDAVRVILTGGGAHPGCTACHSYNSWSVHLLYAGRVDQQIKRLGHRIDLSSLCAAMGSMRVNGERVGAFAAVAVDDDAMMSHFTGLPRIVLFITPSDPFACTAASAEAVCEAVCRHAMASLARHEWPDAFAVTSHLPLTPHGKTDARRLRDVATLSDWRVFDVRSGCAGVWTGVIGNSLEGRSALNSTGDDCTTATVVDRIEAPPSNNTNLDGVFRGDRASAVQAISPAQPLASFIVDAQRAHFHASGAPMHTTGAYIWGVDGENFLACGYNSLDAVRLSSLVNMWVTAQSMHIQRRTQGVPTSPLDGSALVGEPLETIILHTPFADFVERVEKAVGGMPVGSASTARREIELPSAAMLPVSIGGKTRRTQSKSPPPSHKRPRLESDQTTTLDAAACAPASPLCGCFVSRTHAHNACPSCTALHDDVSVLPVGVGGVGSGGALSVCWSLPTEKCIDASPLLAKGADGRWFVFVGSHSGEFVCADAFTGGVVWRTLLEDRIESSAAIVPFSSLIAVGCYDGSIYFLDNSTGNVVWRFETAESVKCSPIPLALALAPPGIVQDSAVTLLRSWSASTAFTAGRTAPPPLVSVGLVACGSHDGRLYILCPSRRLCVASYELNSPVFASPCLSYEHRLVYACALDGVVHAVSLGDMCCEPGDEGARKAVSCVWKRKVGRAVFACPVVDESCDIVVVATVDGDVQGICAASGVALWAFATGSPIFSSPSNAFSLDSLTGNYAVVFGCHDGRTRYLSIPPRTATRSAIINDGRCGFTSEEGYVQSMADDRNSLLLQQPHAVWSSARIDDGVSSAVVYASPFVCDGTKRTSSSVCSCASTYSVAAAVVVIAESGGWVRVVAARDGLDCCVPLKLPGDVFSSPVCIGGKVYVGCRNNRFYCLQWTQTVR* # PASA_UPDATE: g10870.t1, single gene model update, valid-1, status:[pasa:asmbl_4891,status:3], valid-1 NODE_271_length_28602_cov_42.145 . gene 20113 21897 . + . ID=g10870;Name=g10870.t1 NODE_271_length_28602_cov_42.145 . mRNA 20113 21897 . + . ID=g10870.t1;Parent=g10870;Name=g10870.t1 NODE_271_length_28602_cov_42.145 . five_prime_UTR 20113 20210 . + . ID=g10870.t1.utr5p1;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . exon 20113 20330 . + . ID=g10870.t1.exon1;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . CDS 20211 20330 . + 0 ID=cds.g10870.t1;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . exon 20445 20636 . + . ID=g10870.t1.exon2;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . CDS 20445 20636 . + 0 ID=cds.g10870.t1;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . exon 20823 21897 . + . ID=g10870.t1.exon3;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . CDS 20823 21524 . + 0 ID=cds.g10870.t1;Parent=g10870.t1 NODE_271_length_28602_cov_42.145 . three_prime_UTR 21525 21897 . + . ID=g10870.t1.utr3p1;Parent=g10870.t1 #PROT g10870.t1 g10870 MEADKLDVQMDQLCTELLKRENLHSVLRLLDSFHIYGEKKGFVTRSEFRKMCTDLKISIDRTLLEALMTWCDPTGEGIVSQAELSKYLSQVQAWGRDLQQGGPKTATPNSARPPTVRPSDQSWTWFREPTQAELESQRGTPATLTSAAKKSLVAPWANNDGSVQGDEAKAEMHTGRRLHPNAPGARKGDNEPPWGIERPSQTPVSNPTSQRGAPMSAPSPNRQPSAGPSHPNEAAIMHDLSRQLNDDIYGSFCNLKKGLGHIDRNRNGRVDRNEMRRMCNQYNLRLRGNLLEQLFDLAESNGSISCADFVRIFESVNRTEPVKLPRVEPDRRGLLFG* # ORIGINAL: g10868.t1 original gene structure, not modified by PASA NODE_271_length_28602_cov_42.145 AUGUSTUS gene 10239 12398 . + . ID=g10868;Name=g10868.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS mRNA 10239 12398 . + . ID=g10868.t1;Parent=g10868;Name=g10868.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS exon 10239 12398 . + . ID=g10868.t1.exon1;Parent=g10868.t1 NODE_271_length_28602_cov_42.145 AUGUSTUS CDS 10239 12398 . + 0 ID=cds.g10868.t1;Parent=g10868.t1 #PROT g10868.t1 g10868 MDQPVAPRDEPPADGTAVEKVVIAVRAKRVGSDGEYSADEQLRPTADRLKRIRVASVAPRRPSDAVGSATDGAVARDTAAHVHRMKAESPPNICADTGTVHVQTHVDTEKTSQAARLDLSLNITSASPPPAVEGPHNQNGRSARETGDTALPMAVSAQPKQALNLPTTAAGIGSSDGPRIPYADTVRGRQFSPYQLATAQQGSFGHIVPPPAAAAQSQPAFGEWGAEYAAYPQVGYPASFSGRSFVSTGMSVSSPMYHVNTGPPPPWSPTSERAMLGQAYHEGPYHFPPGGGPASLEATSGHIGRPYANILPMQAQYVPGGAAVAAAGHWFPHRDVPSGHRGTLQGTDGYGPPMGDGGTALYHPYSRVHAGNVDGANIGRAAFYGSSLYRSAPADIGGPVRRGFASLNERTSTTRDAESIANNSAIKAVRRSPKSLSAPADLNASGVASGRQAANALSGTAIQKAASEEAPRRSPTVVDGRHLNTPPPQGVHHMHAGRIGLQSTTTAASGPHAEGVTANLVSSQLWWSFHEHNNEMIVTRNGRCLFPVLAIRIANLVPRELYSVALDFAPADSHRWKYIGGAWVVGGRPDSTNTPTMYVHPDSPNYGSFWMEGPVTFSKAKLTNRRMDTSGCVVLNSLHRYLPRFHIFRVDPRGMQTGEPVFTISFPETLFFAVTAYQNERIKELKIKNNPFAKAFVHSAPKVDADADADADGSADAPP* # ORIGINAL: g2314.t1 original gene structure, not modified by PASA NODE_2971_length_4626_cov_36.0677_potentialcontaminant AUGUSTUS gene 449 1123 . + . ID=g2314;Name=g2314.t1 NODE_2971_length_4626_cov_36.0677_potentialcontaminant AUGUSTUS mRNA 449 1123 . + . ID=g2314.t1;Parent=g2314;Name=g2314.t1 NODE_2971_length_4626_cov_36.0677_potentialcontaminant AUGUSTUS exon 449 1123 . + . ID=g2314.t1.exon1;Parent=g2314.t1 NODE_2971_length_4626_cov_36.0677_potentialcontaminant AUGUSTUS CDS 449 1123 . + 0 ID=cds.g2314.t1;Parent=g2314.t1 #PROT g2314.t1 g2314 MANINKADSDKRKLRFRTANDLWCPQHVISPHFVNQSAPTPTPASTPVTTPISAGNKQFTSLEYLYTAKTEKTRVIETGEWQTPTAEHIDMSSAPPFPSYRDPNMKTQNDIVRQTDRESRFRQPISTCPPDWYHTTWDEHVMTGAIRGPKNDGVRDLTYGQLDTGIVPQTRGGITLADAIPNSSFGKMTRQRNLRSFSLRNAALTQESPRQTACRLDEFGNCKR* # PASA_UPDATE: g12942.t1, single gene model update, valid-1, status:[pasa:asmbl_3839,status:12],[pasa:asmbl_3840,status:12], valid-1 NODE_2232_length_7133_cov_41.2103 . gene 2748 6997 . - . ID=g12942;Name=g12942.t1 NODE_2232_length_7133_cov_41.2103 . mRNA 2748 6997 . - . ID=g12942.t1;Parent=g12942;Name=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 6832 6997 . - . ID=g12942.t1.exon1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 6832 6997 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 6340 6614 . - . ID=g12942.t1.exon2;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 6340 6614 . - 2 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 5690 6124 . - . ID=g12942.t1.exon3;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 5690 6124 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 5278 5535 . - . ID=g12942.t1.exon4;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 5278 5535 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 5049 5104 . - . ID=g12942.t1.exon5;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 5049 5104 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 4695 4887 . - . ID=g12942.t1.exon6;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 4695 4887 . - 1 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 4490 4524 . - . ID=g12942.t1.exon7;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 4490 4524 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 3732 4122 . - . ID=g12942.t1.exon8;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 3732 4122 . - 1 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . exon 2748 3419 . - . ID=g12942.t1.exon9;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . CDS 3039 3419 . - 0 ID=cds.g12942.t1;Parent=g12942.t1 NODE_2232_length_7133_cov_41.2103 . three_prime_UTR 2748 3038 . - . ID=g12942.t1.utr3p1;Parent=g12942.t1 #PROT g12942.t1 g12942 MIVCGAAFTLQVPEGLPATVTACLTLIARRLSSKNVFVKKLESVETLGSTTVIVSDKTGTLTMNKMSAAHVFYNWEVHSTDKASKEYLQMSEPSCASLMRVAAICSRAVYEYSEDDHDIPASEKKILGDASETAFLRLCETIMPTMEVRDKYPKLFEIPFNSKNKFQLSIHTVPDDGPENGQGHLLAFKGAPEMVFERCNFIMVKGERQPITDDIRTRLAESVEDLAALGERVLAFSQVHVPCPAGEARVYSSDSKNYPMDGYTFLGLISLIDPPKPGVPDAISLCRTAGIKVIMATGDHPLTAKAIARQIGLVTFETEEKVRPGQQPKPKPEGGYRAVVITGMALKAYTDEQLEEVLKKDEIVFARTSPQQKHQIVEALQRLKHIVAVTGDGVNDSPALKQADIGIAMGIGGSDVAKEAADIILMDDNFVSIVAGIEEGRLIFDNLRKSIAYTLSHLFPELFPFIINLITGWCQARFGNSTLIESVPSNCAVKLCAAREISPFSQMISAILILCIDLGTEMAPAVSLAYESAELNIMNRKPRDAATEHLVNIQTLVYSYFFMGVMETAPAIACFFYIMKENGFDAGFVIKDSSDFTVDANTILSNGVAYTRSEQLDILREAQTAYFAAIVMMQMMNLIACKTRLSSVFVHGFANKHITKAIGISSVILVLIVFVPPFNTVFTSKMPIPGYFWLIPLPFLAFGFVVTEIRKYFSRVLPTSSFYHKIFTW* # PASA_UPDATE: g12941.t1, single gene model update, valid-1, status:[pasa:asmbl_3841,status:12], valid-1 NODE_2232_length_7133_cov_41.2103 . gene 227 1919 . + . ID=g12941;Name=g12941.t1 NODE_2232_length_7133_cov_41.2103 . mRNA 227 1919 . + . ID=g12941.t1;Parent=g12941;Name=g12941.t1 NODE_2232_length_7133_cov_41.2103 . five_prime_UTR 227 227 . + . ID=g12941.t1.utr5p1;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . exon 227 311 . + . ID=g12941.t1.exon1;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . CDS 228 311 . + 0 ID=cds.g12941.t1;Parent=g12941.t1;5_prime_partial=true NODE_2232_length_7133_cov_41.2103 . exon 734 807 . + . ID=g12941.t1.exon2;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . CDS 734 807 . + 0 ID=cds.g12941.t1;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . exon 1032 1243 . + . ID=g12941.t1.exon3;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . CDS 1032 1243 . + 1 ID=cds.g12941.t1;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . exon 1590 1919 . + . ID=g12941.t1.exon4;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . CDS 1590 1759 . + 2 ID=cds.g12941.t1;Parent=g12941.t1 NODE_2232_length_7133_cov_41.2103 . three_prime_UTR 1760 1919 . + . ID=g12941.t1.utr3p1;Parent=g12941.t1 #PROT g12941.t1 g12941 GIWRAMKLRHDKYARENDMIYFHKVPEEVPALPTGKRLADFVPFALPPISDKWPSDAMAGIEPIEAPPVTSVADASSKAASGAPATKKSSVGKCCRAVTVAICLPLLAMISLIGVLVWIVLLPVKIICCPIGCLAQLLFDIVEKVIKMPLKALKWAAQDDGDDKKNAKKEDKDVELGHK* # ORIGINAL: g5260.t1 original gene structure, not modified by PASA NODE_1234_length_12863_cov_41.1146 AUGUSTUS gene 606 3627 . - . ID=g5260;Name=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS mRNA 606 3627 . - . ID=g5260.t1;Parent=g5260;Name=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 3505 3627 . - . ID=g5260.t1.exon1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 3505 3627 . - 0 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 3246 3368 . - . ID=g5260.t1.exon2;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 3246 3368 . - 0 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 2506 3069 . - . ID=g5260.t1.exon3;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 2506 3069 . - 0 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 1579 2076 . - . ID=g5260.t1.exon4;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 1579 2076 . - 0 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 1170 1282 . - . ID=g5260.t1.exon5;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 1170 1282 . - 0 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 876 992 . - . ID=g5260.t1.exon6;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 876 992 . - 1 ID=cds.g5260.t1;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS exon 606 759 . - . ID=g5260.t1.exon7;Parent=g5260.t1 NODE_1234_length_12863_cov_41.1146 AUGUSTUS CDS 606 759 . - 1 ID=cds.g5260.t1;Parent=g5260.t1 #PROT g5260.t1 g5260 MNKGGGSAGKARSVAPIDVEDALEQLKGLKDVGLNSSVLMLSGLLIAATGANTSSADNYAHLIALLYHADALRENGENRRAEHFYRQSLMSRKALLKTHSSAASDPLVPGECDIKFRIHQCLSRENDHKEARAILESVPVKLRTPQIHAALAEVYRRTGAVVQAIASYKEVLRTHPNAIDAKVAILSLGARVDGAGRTGTAAGEVSWDDAVVAAYDLQGSQQYRKAAGAFASVETEVLRGSSQVLSAAGDALWYAGEVPLALRMYARAKEADPCRVEGMDNYAAALAHSGNYALIGHLASDLVRTAKSKAITWVVASRQYDVATNPSTAEDAFRLCRHALTLEPGCPSAMLRLAGVYASCKRYDEAVAMYRNMIGIARGNFFAFHGLVETLLAAGHASDALVAAKEAAQLAPANPRSLALAGSVLAQAADAHAKASAKMVFDACLQYDPLCLDAVVGLVQLLVAQQKTDVAIKLMSDFVKRCPNEQTHTRLGHLLTLAGEFTEAITNYNIAIKMNPRFTLAEDGLARVYALMSGGDNEDDDAIEEDDGEHMGSGSEISAEEAG* # PASA_UPDATE: g5261.t1, single gene model update, valid-1, status:[pasa:asmbl_886,status:12],[pasa:asmbl_888,status:12], valid-1 NODE_1234_length_12863_cov_41.1146 . gene 3929 6553 . + . ID=g5261;Name=g5261.t1 NODE_1234_length_12863_cov_41.1146 . mRNA 3929 6553 . + . ID=g5261.t1;Parent=g5261;Name=g5261.t1 NODE_1234_length_12863_cov_41.1146 . five_prime_UTR 3929 3966 . + . ID=g5261.t1.utr5p1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 3929 3998 . + . ID=g5261.t1.exon1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 3967 3998 . + 0 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 4214 4494 . + . ID=g5261.t1.exon2;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 4214 4494 . + 1 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 4724 4874 . + . ID=g5261.t1.exon3;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 4724 4874 . + 2 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 5151 5230 . + . ID=g5261.t1.exon4;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 5151 5230 . + 1 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 5561 5655 . + . ID=g5261.t1.exon5;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 5561 5655 . + 2 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . exon 5946 6553 . + . ID=g5261.t1.exon6;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . CDS 5946 6116 . + 0 ID=cds.g5261.t1;Parent=g5261.t1 NODE_1234_length_12863_cov_41.1146 . three_prime_UTR 6117 6553 . + . ID=g5261.t1.utr3p1;Parent=g5261.t1 #PROT g5261.t1 g5261 MAGKGTTPAKRSRKREEEDAVVVENNPKRQKRRSSFVPGRIRKSLSGPMDDYEDAAERADFHKEIAPNATNEVRLGSLIDMAAKYGLGVLEEAKEDDGEVPDMNAIAADIVAAFRKTLDRNGTIAIVAKPKPMKPNPKNAELQKSIDAYAQVKERLTKEDALWEKVVEHYKNAQAAPIPAEEVAEAATARVTRNARTKGTAVISTLTKQMTIQVKQLQHTLKTLQTLQDDASKTCGAHASVMASDAFAGYAHVNSPKKLIRGILNPAAL* # PASA_UPDATE: g5262.t1, single gene model update, valid-1, status:[pasa:asmbl_889,status:12], valid-1 NODE_1234_length_12863_cov_41.1146 . gene 6952 11415 . + . ID=g5262;Name=g5262.t1 NODE_1234_length_12863_cov_41.1146 . mRNA 6952 11415 . + . ID=g5262.t1;Parent=g5262;Name=g5262.t1 NODE_1234_length_12863_cov_41.1146 . five_prime_UTR 6952 7018 . + . ID=g5262.t1.utr5p1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 6952 7079 . + . ID=g5262.t1.exon1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 7019 7079 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 7306 7334 . + . ID=g5262.t1.exon2;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 7306 7334 . + 2 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 7551 7679 . + . ID=g5262.t1.exon3;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 7551 7679 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 7938 8028 . + . ID=g5262.t1.exon4;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 7938 8028 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 8395 8511 . + . ID=g5262.t1.exon5;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 8395 8511 . + 2 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 8895 8968 . + . ID=g5262.t1.exon6;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 8895 8968 . + 2 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 9184 9252 . + . ID=g5262.t1.exon7;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 9184 9252 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 9435 9608 . + . ID=g5262.t1.exon8;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 9435 9608 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 9793 9909 . + . ID=g5262.t1.exon9;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 9793 9909 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 10122 10199 . + . ID=g5262.t1.exon10;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 10122 10199 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 10407 10484 . + . ID=g5262.t1.exon11;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 10407 10484 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . exon 10848 11415 . + . ID=g5262.t1.exon12;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . CDS 10848 11093 . + 0 ID=cds.g5262.t1;Parent=g5262.t1 NODE_1234_length_12863_cov_41.1146 . three_prime_UTR 11094 11415 . + . ID=g5262.t1.utr3p1;Parent=g5262.t1 #PROT g5262.t1 g5262 MSATRVAVVLALCLNAVFVAALLGDVFVPEKLGSVFGVATAPKYVGFDGSMHLVDAENVEDIVAATVGVEASEPSIVDGLPNGDAFRKPRAVATVVIEGLNAVSVPAGLFSTSYFLRNLPEERSSALRAILDGSFVDSADVPISVADIAATVFGGNALTLSFSASRTTAMIGHVKRAAGNLDFAVAMDTSASSVGVVSGVAVDVSSGFELSKDKLRALVAAEFGVAEGQETVTLTANGASAVFNLGLQSDYIFLAEIAAARALVDSVKLAGKRAVTDVLTFTLIGYKAVEQASGADATKARVAAAVALDKTSKILAALSDVYGGDFVGFIALLSSSPSDKVVAAPAIVRDRSIRIRDDNNGTVTPRKNPAIPWAVTFNIVLWLSIVLVLALIAVAYSLMYMDPGHDSVIYLMTSQRPKAD* # PASA_UPDATE: g5263.t1, single gene model update, valid-1, status:[pasa:asmbl_887,status:12], valid-1 NODE_1234_length_12863_cov_41.1146 . gene 12119 12743 . - . ID=g5263;Name=g5263.t1 NODE_1234_length_12863_cov_41.1146 . mRNA 12119 12743 . - . ID=g5263.t1;Parent=g5263;Name=g5263.t1 NODE_1234_length_12863_cov_41.1146 . five_prime_UTR 12743 12743 . - . ID=g5263.t1.utr5p1;Parent=g5263.t1 NODE_1234_length_12863_cov_41.1146 . exon 12119 12743 . - . ID=g5263.t1.exon1;Parent=g5263.t1 NODE_1234_length_12863_cov_41.1146 . CDS 12482 12742 . - 0 ID=cds.g5263.t1;Parent=g5263.t1;5_prime_partial=true NODE_1234_length_12863_cov_41.1146 . three_prime_UTR 12119 12481 . - . ID=g5263.t1.utr3p1;Parent=g5263.t1 #PROT g5263.t1 g5263 TRNTGGVAGTPWFFFNGVNVQASPSWSESDWEGVINSIITPQAMLHSGFKAAVTCPSGQVSCTYLPGQTQCCLDGEACIPNVGCRC* # ORIGINAL: g13483.t1 original gene structure, not modified by PASA NODE_1370_length_11725_cov_38.3694 AUGUSTUS gene 150 2127 . + . ID=g13483;Name=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS mRNA 150 2127 . + . ID=g13483.t1;Parent=g13483;Name=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 150 248 . + . ID=g13483.t1.exon1;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 150 248 . + 0 ID=cds.g13483.t1;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 730 774 . + . ID=g13483.t1.exon2;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 730 774 . + 0 ID=cds.g13483.t1;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 945 1085 . + . ID=g13483.t1.exon3;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 945 1085 . + 0 ID=cds.g13483.t1;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 1479 1601 . + . ID=g13483.t1.exon4;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 1479 1601 . + 0 ID=cds.g13483.t1;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 2029 2127 . + . ID=g13483.t1.exon5;Parent=g13483.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 2029 2127 . + 0 ID=cds.g13483.t1;Parent=g13483.t1 #PROT g13483.t1 g13483 MLIDGLIDWQLQSEESQPKAFKDDEDNLTEEGKKIKSLLKEHQGLGSGSEEEEDEDISDPDKDREELKQQPPPRPAESKSRKRRAEDADSPQKKKVKTEAASAPRPLTEDAVRQLLARKPLGAKKLKRKFKEALSENPEANMNILRGILSRVARREKDEDGNLFFKLL* # PASA_UPDATE: g13486.t1, single gene model update, valid-1, status:[pasa:asmbl_1380,status:12], valid-1 NODE_1370_length_11725_cov_38.3694 . gene 8525 11595 . + . ID=g13486;Name=g13486.t1 NODE_1370_length_11725_cov_38.3694 . mRNA 8525 11595 . + . ID=g13486.t1;Parent=g13486;Name=g13486.t1 NODE_1370_length_11725_cov_38.3694 . five_prime_UTR 8525 8711 . + . ID=g13486.t1.utr5p1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 8525 8792 . + . ID=g13486.t1.exon1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 8712 8792 . + 0 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 8993 9122 . + . ID=g13486.t1.exon2;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 8993 9122 . + 0 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 9395 9520 . + . ID=g13486.t1.exon3;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 9395 9520 . + 2 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 9966 10091 . + . ID=g13486.t1.exon4;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 9966 10091 . + 2 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 10264 10386 . + . ID=g13486.t1.exon5;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 10264 10386 . + 2 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 10607 10729 . + . ID=g13486.t1.exon6;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 10607 10729 . + 2 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 11063 11185 . + . ID=g13486.t1.exon7;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 11063 11185 . + 2 ID=cds.g13486.t1;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . exon 11470 11595 . + . ID=g13486.t1.exon8;Parent=g13486.t1 NODE_1370_length_11725_cov_38.3694 . CDS 11470 11595 . + 2 ID=cds.g13486.t1;Parent=g13486.t1;3_prime_partial=true #PROT g13486.t1 g13486 MKAAQQTQAQKAAPPPPAPVQDDAPQQDHPQLSALSLVVSDPRTLVLMLNSPEAGVCGQACEALSKFAEQSDKNRSDLLKVGALRPVLELLGSADALVLKNASLCLATLSESVEVRKEIRHNDGLEALVELLSLETDNEIQENATLALAHMAADFASKVEIFRLGGLEKIVKLLQHTDPDVQGNVTHALSLMLEEYNCRSIFGKLNGIGPLLDLLTSEYTEIQEHVLLSIAKCAQDAFNRAEIRKLGGMEKLAAFLDASHEDLHESALNALANCLEDNESMELFQKSGGLQTLLGLMKTSEAPVVLQHAALAIARAAKA # PASA_UPDATE: g13484.t1, single gene model update, valid-1, status:[pasa:asmbl_1375,status:12],[pasa:asmbl_1376,status:12],[pasa:asmbl_1377,status:12],[pasa:asmbl_1379,status:12], valid-1 NODE_1370_length_11725_cov_38.3694 . gene 3327 6118 . + . ID=g13484;Name=g13484.t1 NODE_1370_length_11725_cov_38.3694 . mRNA 3327 6118 . + . ID=g13484.t1;Parent=g13484;Name=g13484.t1 NODE_1370_length_11725_cov_38.3694 . five_prime_UTR 3327 3774 . + . ID=g13484.t1.utr5p1;Parent=g13484.t1 NODE_1370_length_11725_cov_38.3694 . exon 3327 3859 . + . ID=g13484.t1.exon1;Parent=g13484.t1 NODE_1370_length_11725_cov_38.3694 . CDS 3775 3859 . + 0 ID=cds.g13484.t1;Parent=g13484.t1 NODE_1370_length_11725_cov_38.3694 . exon 4093 6118 . + . ID=g13484.t1.exon2;Parent=g13484.t1 NODE_1370_length_11725_cov_38.3694 . CDS 4093 5738 . + 2 ID=cds.g13484.t1;Parent=g13484.t1 NODE_1370_length_11725_cov_38.3694 . three_prime_UTR 5739 6118 . + . ID=g13484.t1.utr3p1;Parent=g13484.t1 #PROT g13484.t1 g13484 MDNNLLATLDLANFNFDALATAQLEFAKAAVEANAPRQRAGSSERLSVTGGVSKAKGKRGGITRTDVRKTRSYEKLPAREEHGGSQQHLAPSPSPRPRASTGQTMLKNFFQPTPKSPRDSVPHAHQHAHQHQLHQQQQQQQQQHSQSYKKTGMFSSFRLPRSASMPNLADQDASAQLAMLCDSKSSNSPNSQSQFSSTYSLEVPYDPRFAILQLQQLQQQQQLQQQQQQQQQQQQQQPGHRRSLSPNEELQRLMMEGNMPDAQQLLQMQQQLHDGQLRQQQILLQHSQHKLIMEQQGTTGTVLLQQSDGTLIPASIIGVIQPGATARSSISSQQQQQQQQQQQQQQQQQQQQQQQSLSFATARSSGGLTIHIPPAISVDFADDDASAGFVQPLDYRMQPELDDDGSSDMDSASEYDYGDFASPTPPDAFAMQLQQFAEMAAGGSSGTEQFQQQSSDQPEISFGQFLEQLSETVDPQLLENVTPSPVPIARAQAREDVAARIPFNRLSLSDIDELATYVPNGDESGDIQAQLVAFEAKVRASMDGGGVLASLDDSQTRAVLAQLELQRSLGASNFLN* # ORIGINAL: g13485.t1 original gene structure, not modified by PASA NODE_1370_length_11725_cov_38.3694 AUGUSTUS gene 6444 7802 . - . ID=g13485;Name=g13485.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS mRNA 6444 7802 . - . ID=g13485.t1;Parent=g13485;Name=g13485.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS exon 6444 7802 . - . ID=g13485.t1.exon1;Parent=g13485.t1 NODE_1370_length_11725_cov_38.3694 AUGUSTUS CDS 6444 7802 . - 0 ID=cds.g13485.t1;Parent=g13485.t1 #PROT g13485.t1 g13485 MTLFDRAEGFESLDDTPRKKQQRKPKHSERHEKDLNKKKTKWKNLVLIICISSFLTITAGFINAVTLFGEYQITTSHMTGTVTKMAIELQARNGVSAARLFGLVCSFIFGAFISGMVIGDYKLKLGRRYGVALLIEAGFLFASWIAIRWIDATFASYLAAAACGLQNAMTTNYSGAIVRTTHVTGIVTDIGIVLGHYVRLRKADFWKLKIFIPILVSYLVGGVCGVFLERLIGDDAMLIAASVIAFIGMFFIVNRWIQNFKEGRQIFATTAKDDNSTHTAIDVLAQDDNLGYSQISMKDDTEEEVQRTMHSMRELDIDAVPVMRSGASNSKLHSTSAVSLGNGNNEGEASTPVTKGRFRVSLPAAFSKRAGDKGKGKSRLLGNQSEMSLSMYSFGGDEDDGDGRADGRADDNEDGAPDDDRSDKGAYAESDNASTVKSVGGDSDYDEENGTR* # PASA_UPDATE: g11416.t1, single gene model update, valid-1, status:[pasa:asmbl_6746,status:12], valid-1 NODE_3934_length_2493_cov_34.7266 . gene 229 2352 . - . ID=g11416;Name=g11416.t1 NODE_3934_length_2493_cov_34.7266 . mRNA 229 2352 . - . ID=g11416.t1;Parent=g11416;Name=g11416.t1 NODE_3934_length_2493_cov_34.7266 . five_prime_UTR 2121 2352 . - . ID=g11416.t1.utr5p1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . exon 2028 2352 . - . ID=g11416.t1.exon1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . CDS 2028 2120 . - 0 ID=cds.g11416.t1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . exon 1608 1743 . - . ID=g11416.t1.exon2;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . CDS 1608 1743 . - 0 ID=cds.g11416.t1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . exon 1126 1440 . - . ID=g11416.t1.exon3;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . CDS 1126 1440 . - 2 ID=cds.g11416.t1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . exon 577 731 . - . ID=g11416.t1.exon4;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . CDS 577 731 . - 2 ID=cds.g11416.t1;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . exon 229 265 . - . ID=g11416.t1.exon5;Parent=g11416.t1 NODE_3934_length_2493_cov_34.7266 . CDS 229 265 . - 0 ID=cds.g11416.t1;Parent=g11416.t1;3_prime_partial=true #PROT g11416.t1 g11416 MDVYLKFGPSGEKVDVEPGTMGDFLVLVRETFPVLKRATDQHILLFVHNNASANVLQRVVGMSDVTHNSHIEIVLAVGATASTSVMAMPKSHSLPEISVVDANGLSSNSSNAVQPSTRQSLPDASSYIVPITAEQRSRSASNVIQLTPGHRLSVCSYKKSTKCDYCHDGLWGLARQGLKCADCHMNFHKQCAYNLVHPCAGRSDAPAASAGIPHRFSVHTFKSIATCGHCKKLMWGVVRQGVQCE # PASA_UPDATE: g5855.t1, single gene model update, valid-1, status:[pasa:asmbl_5485,status:12], valid-1 NODE_3052_length_4443_cov_35.7926 . gene 1307 4288 . - . ID=g5855;Name=g5855.t1 NODE_3052_length_4443_cov_35.7926 . mRNA 1307 4288 . - . ID=g5855.t1;Parent=g5855;Name=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 4206 4288 . - . ID=g5855.t1.exon1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 4206 4288 . - 0 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 4052 4098 . - . ID=g5855.t1.exon2;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 4052 4098 . - 1 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 3687 3825 . - . ID=g5855.t1.exon3;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 3687 3825 . - 2 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 3422 3484 . - . ID=g5855.t1.exon4;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 3422 3484 . - 1 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 2905 3078 . - . ID=g5855.t1.exon5;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 2905 3078 . - 1 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 2582 2630 . - . ID=g5855.t1.exon6;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 2582 2630 . - 1 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 2286 2404 . - . ID=g5855.t1.exon7;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 2286 2404 . - 0 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 1938 1990 . - . ID=g5855.t1.exon8;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 1938 1990 . - 1 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . exon 1307 1773 . - . ID=g5855.t1.exon9;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . CDS 1604 1773 . - 2 ID=cds.g5855.t1;Parent=g5855.t1 NODE_3052_length_4443_cov_35.7926 . three_prime_UTR 1307 1603 . - . ID=g5855.t1.utr3p1;Parent=g5855.t1 #PROT g5855.t1 g5855 MEAACASPHSFNAMNGFVVVDRARGRHLSFASGFAYSGSYVGTVLVGILGSLIIDSYGWRSVFRVFGALAVAWNLLMWRPYQRTMHSDDSSSSRYAAPSQWRTIIRLPGVWACIGTHFSFGMFYFVVHNWLPTYFHETLEDSLAPWVTNVLPYVLMSATSPLVGIMADRMRARGVSLTNVRKFFQIFSLLGAAFFILLLETTDSPFLKLACVCLAMMASVFHVAGSMPNPQDIAPTHAGLVFGMMNTAGALSGVVGIAMTGSILRRTQSWALVFQCIAAWCVFGSAVFYKWGTAERLI* # PASA_UPDATE: g5854.t1, single gene model update, valid-1, status:[pasa:asmbl_5486,status:12], valid-1 NODE_3052_length_4443_cov_35.7926 . gene 5 1061 . + . ID=g5854;Name=g5854.t1 NODE_3052_length_4443_cov_35.7926 . mRNA 5 1061 . + . ID=g5854.t1;Parent=g5854;Name=g5854.t1 NODE_3052_length_4443_cov_35.7926 . five_prime_UTR 5 125 . + . ID=g5854.t1.utr5p1;Parent=g5854.t1 NODE_3052_length_4443_cov_35.7926 . exon 5 1061 . + . ID=g5854.t1.exon1;Parent=g5854.t1 NODE_3052_length_4443_cov_35.7926 . CDS 126 746 . + 0 ID=cds.g5854.t1;Parent=g5854.t1 NODE_3052_length_4443_cov_35.7926 . three_prime_UTR 747 1061 . + . ID=g5854.t1.utr3p1;Parent=g5854.t1 #PROT g5854.t1 g5854 MYSSLRAWRGARHAMMDEWNEKMQAENNTLLLEDLTREFSEMAAHVADGALGRNDAATEDNLGVSRKSVAFNTVIGGSILAPGAMMRRRGSTMSIAAIERPSSAQSHHTGQRATKTKSSGGAGMARTTSGAGSIFMPHDRDSLHSQSTHADRHAHTLGRKGTTAERMDRLEQRFEAFAESTEKRLDNIANLLKLLSRKGIGEDGAE* # ORIGINAL: g12005.t1 original gene structure, not modified by PASA NODE_950_length_15549_cov_42.2042 AUGUSTUS gene 150 2871 . + . ID=g12005;Name=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS mRNA 150 2871 . + . ID=g12005.t1;Parent=g12005;Name=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 150 214 . + . ID=g12005.t1.exon1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 150 214 . + 2 ID=cds.g12005.t1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 538 610 . + . ID=g12005.t1.exon2;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 538 610 . + 0 ID=cds.g12005.t1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 847 969 . + . ID=g12005.t1.exon3;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 847 969 . + 2 ID=cds.g12005.t1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 1539 1663 . + . ID=g12005.t1.exon4;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 1539 1663 . + 2 ID=cds.g12005.t1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 1913 2048 . + . ID=g12005.t1.exon5;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 1913 2048 . + 0 ID=cds.g12005.t1;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 2252 2871 . + . ID=g12005.t1.exon6;Parent=g12005.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 2252 2871 . + 2 ID=cds.g12005.t1;Parent=g12005.t1 #PROT g12005.t1 g12005 HCHPKIVAAIRDQAGKLIHGQVNIVLHEPMIKLIERLLTIVPKGLDSFFFWNSGAEAVEASIKLARHYTGKPNIIVFQGGYHGRTIGTMSLTTSKYIYRARYGPLMPGVFVAPFPYHRQLPTGLLGLLSEKAATAYCLEQFELLLHQQTSPAETACAIMEPVLGEGGYVEAPKEFLRGIRDICTRNGILLIADEVQTGFGRTGKMFAVEHYGVTPDILVMAKGLASGMPLSAIVSSKEITSRSPKGSQGGTYAGNAISCAAALATMDVFESEGVLRNANERSVQLREGLERIRRSGLPLAEVRGLGLMVGLEFDKRTPEGFAGKVSAECYHGEKLLVLPTSAFECLRLIPPLNVTEAECSTALASLERALQKVTRDVGL* # ORIGINAL: g12008.t1 original gene structure, not modified by PASA NODE_950_length_15549_cov_42.2042 AUGUSTUS gene 12061 15040 . + . ID=g12008;Name=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS mRNA 12061 15040 . + . ID=g12008.t1;Parent=g12008;Name=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 12061 12073 . + . ID=g12008.t1.exon1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 12061 12073 . + 0 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 12409 13176 . + . ID=g12008.t1.exon2;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 12409 13176 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 13544 13630 . + . ID=g12008.t1.exon3;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 13544 13630 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 13940 14005 . + . ID=g12008.t1.exon4;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 13940 14005 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 14326 14385 . + . ID=g12008.t1.exon5;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 14326 14385 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 14592 14654 . + . ID=g12008.t1.exon6;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 14592 14654 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 14916 15040 . + . ID=g12008.t1.exon7;Parent=g12008.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 14916 15040 . + 2 ID=cds.g12008.t1;Parent=g12008.t1 #PROT g12008.t1 g12008 MAGSVCCVCSKEFSPGTKILVAQEKNWHPACFTCAVCAVPLNDFVELNGVCYCRPHADEKQHAEFVAKCKRCAQCDVPLIDTFYVRDGKEFCAAHKKAPPKGAPCAACGRAIDGPATIAQDKRFHLECFRCVRCERPLGAGEPYYDVDGDAYCESHYRAAFSQSCDGCGKRIDGDHVSALDMHFHPTCIMCHVCSVAINPGAQFAVMDGKFVCEPCNAKTPPDAATSGGAVAAAGGAVPINRDEEDEEDEDSDEDTTPTNVTSTEAFRIGRIRAYSQKIAPFLELATVDAMPNEEKDQPMTLERMLKLMDLDVDPSDVVDGTQVQHLDGDDEDEPTGPLSIPGLLSLLDVGRGSTDRSADPDFEDPTEELAAGQIETVSTLRECCVVMLTCLI* # PASA_UPDATE: g12006.t1, single gene model update, valid-1, status:[pasa:asmbl_10094,status:3], valid-1 NODE_950_length_15549_cov_42.2042 . gene 3084 5655 . - . ID=g12006;Name=g12006.t1 NODE_950_length_15549_cov_42.2042 . mRNA 3084 5655 . - . ID=g12006.t1;Parent=g12006;Name=g12006.t1 NODE_950_length_15549_cov_42.2042 . five_prime_UTR 5614 5655 . - . ID=g12006.t1.utr5p1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . five_prime_UTR 5239 5265 . - . ID=g12006.t1.utr5p2;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 5614 5655 . - . ID=g12006.t1.exon1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 5190 5265 . - . ID=g12006.t1.exon2;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . CDS 5190 5238 . - 0 ID=cds.g12006.t1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 4835 4947 . - . ID=g12006.t1.exon3;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . CDS 4835 4947 . - 2 ID=cds.g12006.t1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 4402 4565 . - . ID=g12006.t1.exon4;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . CDS 4402 4565 . - 0 ID=cds.g12006.t1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 4092 4149 . - . ID=g12006.t1.exon5;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . CDS 4092 4149 . - 1 ID=cds.g12006.t1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . exon 3084 3736 . - . ID=g12006.t1.exon6;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . CDS 3233 3736 . - 0 ID=cds.g12006.t1;Parent=g12006.t1 NODE_950_length_15549_cov_42.2042 . three_prime_UTR 3084 3232 . - . ID=g12006.t1.utr3p1;Parent=g12006.t1 #PROT g12006.t1 g12006 MDAAVHSATNPQMSPSGTFPFLRNGDTLVGGGAATLAHWRKAGHNIDADLSSLQGAETVAYTGLLGGSLDIARLHTLWAIDDNYREFTRSWYAQVAPFPVGAILTYNARREAVARIQAAGFDAENPQPIYDKVAETLKTLDVRLGDGPFFYGRSPSTMDAVVFSLLAPILRSDLPDDRLKKLVRSHASLVRHFDVISRVYFGGGFGPASSPEGGARAPSLTPEQKSFRRQKWLAVGVSVVAMIGYAIMSGLVSVEVGDGEDEESDDSEEGGYGEDGDGDGDGEDDDDDGQYYYDE* # ORIGINAL: g12007.t1 original gene structure, not modified by PASA NODE_950_length_15549_cov_42.2042 AUGUSTUS gene 6406 9862 . + . ID=g12007;Name=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS mRNA 6406 9862 . + . ID=g12007.t1;Parent=g12007;Name=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 6406 6889 . + . ID=g12007.t1.exon1;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 6406 6889 . + 0 ID=cds.g12007.t1;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 7401 7543 . + . ID=g12007.t1.exon2;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 7401 7543 . + 2 ID=cds.g12007.t1;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 7759 7848 . + . ID=g12007.t1.exon3;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 7759 7848 . + 0 ID=cds.g12007.t1;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 8097 8193 . + . ID=g12007.t1.exon4;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 8097 8193 . + 0 ID=cds.g12007.t1;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS exon 8577 9862 . + . ID=g12007.t1.exon5;Parent=g12007.t1 NODE_950_length_15549_cov_42.2042 AUGUSTUS CDS 8577 9862 . + 2 ID=cds.g12007.t1;Parent=g12007.t1 #PROT g12007.t1 g12007 MIEIVETSSFQDAFDTPSRATPNGVVAVEDRQIHLEPTTSAIDNATTNENGLIIAADSGTTGVDTQRHTSEATTSQDAHVATGTQSEMRTFAPAPVRERGTLDRHVFLDLCAASVDAGRSSPKYPYGPDRRDQLTGGVLQSSLEFDNYFERIFGYLHPDISGSYKFAITCDDHCELWIGADDRPCSEELVAYVGSPSDVEGAEWARPTNDFNAFPSQQSNKSLDLQAGRRYWIEVLHVQRGAGENVSVAWIAPSASGFLPIPTANTSPYMNADSVAKGVVDNSLPAHLPSHVYRSPKPAVNTGVPINANTNLTDARESFIRLPFAGVDEALGSALPQCGIPLSYARPAHIARYVGAGMVSESAVYPKDGTALWKGDIFESENRVIPDLEAQTVVKEYMGAVNARLRELRRPLLELVTIVNVVQKRHAVGPTPGYCFLIELEVRAEGSGTDVNARVSQYVYLPDNALPSSQYGGSRLCASREFAWNPRAKVHMVIAVKNQGAWVRHLVADVEQLLRETGDRNFRLILVDFDSVDIDVEAHLAASQLPRDMWHVVKRTGSFERAGGIQSGVEAVKSPDDIVFLSDLHLEMPRTIIEDMRRYTVRGRKVYAPVVVRLACGRTPETPNGFWEKAGYGLMALYRADYDRIGGMNTNEYKTTRGGEDWEFMDRVFTSGYEVERLRIAKFYHFFHSKRGLWDVAVR* # ORIGINAL: g9990.t1 original gene structure, not modified by PASA NODE_1959_length_8347_cov_38.3612 AUGUSTUS gene 158 651 . + . ID=g9990;Name=g9990.t1 NODE_1959_length_8347_cov_38.3612 AUGUSTUS mRNA 158 651 . + . ID=g9990.t1;Parent=g9990;Name=g9990.t1 NODE_1959_length_8347_cov_38.3612 AUGUSTUS exon 158 651 . + . ID=g9990.t1.exon1;Parent=g9990.t1 NODE_1959_length_8347_cov_38.3612 AUGUSTUS CDS 158 651 . + 2 ID=cds.g9990.t1;Parent=g9990.t1 #PROT g9990.t1 g9990 VPKDIIKGAQYYARACEMHNVESCNNLGLLHQRGSGGVPRDIPRAIALFKTACDMNYANGCFNLGALHLVGEGGGPSGSPSESASASAGGASPAPYKDLPRAFEYSVRACEMGHVYGCVNASRMASLGDGVPRDDALAKKYKAMAEAAAKTSVREIAWSPSRR* # PASA_UPDATE: g9991.t1, single gene model update, valid-1, status:[pasa:asmbl_3107,status:12], valid-1 NODE_1959_length_8347_cov_38.3612 . gene 863 2906 . - . ID=g9991;Name=g9991.t1 NODE_1959_length_8347_cov_38.3612 . mRNA 863 2906 . - . ID=g9991.t1;Parent=g9991;Name=g9991.t1 NODE_1959_length_8347_cov_38.3612 . exon 2547 2906 . - . ID=g9991.t1.exon1;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . CDS 2547 2906 . - 0 ID=cds.g9991.t1;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . exon 2027 2415 . - . ID=g9991.t1.exon2;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . CDS 2027 2415 . - 0 ID=cds.g9991.t1;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . exon 1714 1837 . - . ID=g9991.t1.exon3;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . CDS 1714 1837 . - 1 ID=cds.g9991.t1;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . exon 863 1542 . - . ID=g9991.t1.exon4;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . CDS 1039 1542 . - 0 ID=cds.g9991.t1;Parent=g9991.t1 NODE_1959_length_8347_cov_38.3612 . three_prime_UTR 863 1038 . - . ID=g9991.t1.utr3p1;Parent=g9991.t1 #PROT g9991.t1 g9991 MEMEMDYNPMPPIVVAGRSIITAVLSPSWHNLLSLAADDVLYRCHTHPDGCDVGLALRDYFNADLVNLAALYEQWGLADESLRKIAGRMGGVRILRQDPTENLFSFICSSNNHISRIAGMIDRLCSKYGTLVLVEPTDAATAAHNGQSADERLPIKYHSFPTPEALAAPEVEGELRVLGFGYRAKFIQQSAAAVVAKGGSRYLDSLRKVPYADAHAALVELHGVGAKVADCVCLMSLDKHDAIPVDTHLWQIAARDYLPHLKTKSLTDRVYREIGDHFRKMYGAYAGWAHSVLFSADLKRFEDRITDETGALITTKAQSPKRKRPSKKDAANAVSSTETQHTQHMPRAADARKKLSLSGATGENNVARTTAGNNPRKRIKVEAVALPAGGEIHPVAASVLAVKTESPGEALDAPVHLASVVAVKIECPGDAPDAPVHAYGRLRRSQRARGSTATHTAV* # PASA_UPDATE: g9992.t1, single gene model update, valid-1, status:[pasa:asmbl_3106,status:12], valid-1 NODE_1959_length_8347_cov_38.3612 . gene 3854 8331 . + . ID=g9992;Name=g9992.t1 NODE_1959_length_8347_cov_38.3612 . mRNA 3854 8331 . + . ID=g9992.t1;Parent=g9992;Name=g9992.t1 NODE_1959_length_8347_cov_38.3612 . five_prime_UTR 3854 3920 . + . ID=g9992.t1.utr5p1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 3854 3973 . + . ID=g9992.t1.exon1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 3921 3973 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 4348 4459 . + . ID=g9992.t1.exon2;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 4348 4459 . + 1 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 4662 4769 . + . ID=g9992.t1.exon3;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 4662 4769 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 5016 5145 . + . ID=g9992.t1.exon4;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 5016 5145 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 5485 5535 . + . ID=g9992.t1.exon5;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 5485 5535 . + 2 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 6026 6174 . + . ID=g9992.t1.exon6;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 6026 6174 . + 2 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 6452 6543 . + . ID=g9992.t1.exon7;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 6452 6543 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 6763 6893 . + . ID=g9992.t1.exon8;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 6763 6893 . + 1 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 7094 7200 . + . ID=g9992.t1.exon9;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 7094 7200 . + 2 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 7362 7433 . + . ID=g9992.t1.exon10;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 7362 7433 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 7724 7867 . + . ID=g9992.t1.exon11;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 7724 7867 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 8129 8243 . + . ID=g9992.t1.exon12;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 8129 8243 . + 0 ID=cds.g9992.t1;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . exon 8324 8331 . + . ID=g9992.t1.exon13;Parent=g9992.t1 NODE_1959_length_8347_cov_38.3612 . CDS 8324 8331 . + 2 ID=cds.g9992.t1;Parent=g9992.t1 #PROT g9992.t1 g9992 MAAIEAVVAQVGELKDNEMREVEVGGTKVLLVFSNGAYSALGTKCSHYGAPLKTGVLSNGKIRCPWHGACFNAATGDIEDYPGLDSLATYNVRVAGTDIIVSATAESLAQQKRTKAMCSHNATKDARTFLIVGGGPAANSCAETLRQLGFEGRIVVVTKEPHVPVDRPKLSKMLEATPDQLKLRAPEFFEANKIEIQFSKEVTELDPEAKTAKLNDGTSIRFNAAFIATGGIARRPALPGASLGNIFTLRTLEDGNRIVASVVAKNVVIIGASFIGLETAACIYKKAASVTIVGTDLVKGFGPAIGASLRKLHESNGVKFIGGRAAEFRSADGTNVSLVALSTGETLHADVVVLGCGVLPATQFIRPNGGLKIHQDGTVIADQSLRAAEGVFVGGDIARFPLPLAGNALSHVEHVQMALYHVT* # ORIGINAL: g7089.t1 original gene structure, not modified by PASA NODE_294_length_27823_cov_40.9274 AUGUSTUS gene 103 4713 . + . ID=g7089;Name=g7089.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS mRNA 103 4713 . + . ID=g7089.t1;Parent=g7089;Name=g7089.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 103 4713 . + . ID=g7089.t1.exon1;Parent=g7089.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 103 4713 . + 0 ID=cds.g7089.t1;Parent=g7089.t1 #PROT g7089.t1 g7089 MAGATLGFKNAAGLEVYNGHDLTNDHTSFYCGRAYCAFQSCACGHCDGNCGPHRGCPCPECSDFKPPSVAASLDVPESVHLGSIPLGSLLQMANKSESTRAPFASPPTLPTQQDTTDTAPSGGVSSLVAAQKALADAINGMAKRRYPSLSPVEISSGRRSVTWTTPLCNHPSVAAFMAESGLCSLTAATMVPANVIHAVRTVRKPMCAQPWSCDRWLRAYRVAVDDATATISPNTPLPLAAIQGSKALEMALRLYLGASRATEAASMIALHFERSPVIVACAYEMLCAVPPGMRSDRQWTHFEAALQKFYFGDNLQGLSALAAKEPSRMRALLDALFTTTAVHAPPSAVQQQLRVMVIDVLGESAAAFATVVSRLVADGAVATALNALTGAKEIGRQITLESFCGVSSLPGNILHAIARRQAGEPRLDRGSAWEQLGFCSGTSGKSGQTCIVCATCNGAVCVSCATQCHASRGHVVEWMHDARIFGGFAETEWVGCSCSVDGTHFHLNCADEPLPETLEAYSNLGQTLFALPRDMNSTNALFYELDECGHTPFAHALATGCIVYAGSLLRLMASCEGVNLDALVTREDIAGNNILHILMSNAGLVCAHSAEAAALDAIAMSFLASPDLSSVRETALRSRNNARLNPFGVLVTCLEAAPHHDDDNLQWPSSEQLERYGIAAACARSFADSAMAPGCVDALVKQLAHSRRPTFVRQFASQLAEQATPAVRNAFAASAVRLYVAYHLDIHGDQQQQPPLRSPHMAAPVLRDMFASDPTSAMRELGASARAILVTMMNRTSGSLGLRTNVVTDSMDLLTRVSLRKRVPTLALSFDAQECIHSTTAILSAPVPSPEAQTTETLLGQIFFSTVKLACSFLSSVRHSGANFNLQNACEPLAAAVHDCWSLIVTTLDRMEADMRATYRFGESTLFNDTLNLGDHLYGLLRAQGGSPLGFQVVNTNLPHIAHLANTCFHVTRYCETVAAMVGVPRSSCIVPAVNREGAREAREAVEAMEGVEFGLPHAQQAPVDARHLAVMSDPFFICPNAVHAGGTSEWPILARARDLLAESSFVSSKSNVVRSVGSVLGRNVDDVVAPNAHGRTPIAPPLRRETFARWPLALSALANSLSLDQISAEGTLLSAHISTEAKFADVRESLSRSSGPSIHVQADRSVPLLSLDFTMATGVRLVSAHFANEAGSGAGVNRGWFSTVGHALLAAPSSEREAQHIGSLVSHGALFVPSEVHGTFIPRHVGQDQWQPKLRDAFTHVGKFLALAIANGAVVPLVLARPVILHLLGRPLRLTDLAHYSPQRYDTLCALLSMGAEELDGLGLTFVVSHSEVEGAGVTDLLEGTGVAGSEVDVTRDNVHEYVRLHAQLLMVGRSQHALDAMKQGFASVFNPTTTLALLSPLEVTQLLCGVAELSAETLLSTCVVQAAHGISDTNLRRFNVMFGQCIDRMSVDQRSALVYFCTGSHSVSDSMQISVSVVECSHSQGGSCAIGACTHLPTASVCGNQIRIPLYANADVLFDKLVKASSETLSYEFA* # ORIGINAL: g7092.t1 original gene structure, not modified by PASA NODE_294_length_27823_cov_40.9274 AUGUSTUS gene 11101 15819 . + . ID=g7092;Name=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS mRNA 11101 15819 . + . ID=g7092.t1;Parent=g7092;Name=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 11101 11158 . + . ID=g7092.t1.exon1;Parent=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 11101 11158 . + 0 ID=cds.g7092.t1;Parent=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 11322 12517 . + . ID=g7092.t1.exon2;Parent=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 11322 12517 . + 2 ID=cds.g7092.t1;Parent=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 12658 15819 . + . ID=g7092.t1.exon3;Parent=g7092.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 12658 15819 . + 0 ID=cds.g7092.t1;Parent=g7092.t1 #PROT g7092.t1 g7092 MVCIKTKTAVLLVAIVITCAVAKQAVAADPACTQACPSAAMPTDCVAVSPSSAVDPNADITVSSCMSFSSGTYIYHHVNVVAGGILWFVDDGGEVDLKVNSLLVEQGGRVVAGQWCKPFGCAGGRLNVWLWGDDPTNQGAINAANQGIQCKSPGGCYPALAQANKYCCTGADATSPCAGPTSCATSGQNSAFEGYGALPVDGDNNFFGFKVFAVSYGGSVEMFGRKGVAPSYFVRPDNRSAECETPADQYASESWAQLTGHSWVRLGATARAGATTITLDRAVSWNKGDQIVISTTDWHPSHSEVVEIAVDATLSATVEIIAPLAYDHFGDLTEVDDKLAEQAHNPNKDVDTRAAVGLLTRSITIRSLGATPDAPFPAASACAVGATDPLCYFGGHTIVRQGFAKYQIQGVEFHQLGQGGRIGHYPAHFHLAKDSSYTNAFVTDSSSWDSMTRFFVIHGTHEVAVERNVGFLSIGHGYYLEDASEINNRVCHNLAVSLRAPLMTYLRAQPAGSRTSRMIPGILASVTSLGPAIIQGGDDYAPTAFWTMNMFNDIVGNMAAGVHGFGSCFWLLGSELSGPSKYLLWASKTSTSKDYAQWHRVPGRLSPIKRFRGNSCSTAFSALQSAIDVFPTSTGDTGFNNGNRDSVPHPTNYTVTYDMLPRVTQNFQPTRFSDDPIYQINDAVTCVKSSLYRSPPFDGSDDHYRNPLLCSGAVVSRFRTSFNFQEQNFGSVWLRGYWFLFIDSAITDQLFGGLGFVTGGSWLDAPPGFWMLTSNSVFIGRTQTDSVYANFTGPAVDEDLCFGNTCTIPVDGTAIIPAGLNFGRSITIYDGPFFSDGSVFMRSPNFTCDASLGSKECGAYRMTNQPQEISRGANSSHMMVTNAAIGWKQPNGFYYPPAFAFRRSAFDNETNRHTVIDITQPYLISGPGSAPKPAGRSLFDSVRSIDASTILIDEDGTLTGVINPNNIRTSSLSSNTFFNSPPQVPECKSFGVQTTPFEMLTTVISAAKQSTQLPSAWRTDLAWAFIDPNLPNPTDPSNLYSTYPFVPIYRQRLLPDDTLCEANICDGLDSKNGMFSCSHASMMAGSQTWSAPYLTMDDMTYYIDTNQQPLDGPVCSRFTGNFREEKLFNENESYVLYQLYPQQTSSVTYQLYVGSNFDVSTMGFFARIFPTQYLDTNNKQQAIVKAPQYPGTATVTDGVLTVTLNNSLIAADFEFEANEHFTQCLPRDVCEPNADRSGCVVSRNVTDPQLRESLKEVCEYWVTRAGGVTEQAGHTVADCPRNGCLAFVFTLPPGFAPRPYAEVGLPLALDFTCEEPWNTPLVRANTTTFNDCQATPSGYCAISYIDADGDGYGDGRFPKRAFAVPEGYVTNAADCNDADATVHPHAVENCGNAKDDNCNGIIDDPSVCAVFELPGNTPTRGRTQSQGSSASLSAGAIAGIVVGSVAAVALIAGVAMFTLKGTQATTQTLSV* # PASA_UPDATE: g7091.t1, single gene model update, valid-1, status:[pasa:asmbl_5289,status:12],[pasa:asmbl_5292,status:13], valid-1 NODE_294_length_27823_cov_40.9274 . gene 8281 10619 . + . ID=g7091;Name=g7091.t1 NODE_294_length_27823_cov_40.9274 . mRNA 8281 10619 . + . ID=g7091.t1;Parent=g7091;Name=g7091.t1 NODE_294_length_27823_cov_40.9274 . five_prime_UTR 8281 8332 . + . ID=g7091.t1.utr5p1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . exon 8281 8522 . + . ID=g7091.t1.exon1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . CDS 8333 8522 . + 0 ID=cds.g7091.t1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . exon 8680 8831 . + . ID=g7091.t1.exon2;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . CDS 8680 8831 . + 2 ID=cds.g7091.t1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . exon 9048 9334 . + . ID=g7091.t1.exon3;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . CDS 9048 9334 . + 0 ID=cds.g7091.t1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . exon 9667 10619 . + . ID=g7091.t1.exon4;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . CDS 9667 10297 . + 1 ID=cds.g7091.t1;Parent=g7091.t1 NODE_294_length_27823_cov_40.9274 . three_prime_UTR 10298 10619 . + . ID=g7091.t1.utr3p1;Parent=g7091.t1 #PROT g7091.t1 g7091 MDGADGAGSAPRVDAHSQHTHGRSSWLGMCSASNLFRLGILLLVPAFVNFAAMSQEDTLVKPPGIWVDVGAKQRMYLHCVGAGEPLVLLDAPTGATSDAWAGLQPLIADKTGTRVCAYDRAGLGYSDRPVQTEGYDGVGSISSMNDGGEAKLDGNGRPARPDSAYRHTSRAMVDDVVRLLQHANITQPIVYVGAELGSINARLFSHLHARRVAGTVLVTPLDPALLTLEGGAWAQNVLSREVPKASMNHIMAASGLARIAILLKLSDPVPDHLRGDAMAAARHRQLACRPTHAGSAAEERYFLNESMSQLAMLENLRLTRTPPVPQGHTTVAAVAPEHYDETASRAANVAYSHVVSEILPGKMGDVRAAVVPATCAVDLLWEKRGVAAVVDAVDRVVVGVRMKNKQRSAKGAEDTSTPT* # PASA_UPDATE: g7094.t1, single gene model update, valid-1, status:[pasa:asmbl_5295,status:12], valid-1 NODE_294_length_27823_cov_40.9274 . gene 24717 25492 . + . ID=g7094;Name=g7094.t1 NODE_294_length_27823_cov_40.9274 . mRNA 24717 25492 . + . ID=g7094.t1;Parent=g7094;Name=g7094.t1 NODE_294_length_27823_cov_40.9274 . five_prime_UTR 24717 24776 . + . ID=g7094.t1.utr5p1;Parent=g7094.t1 NODE_294_length_27823_cov_40.9274 . exon 24717 25492 . + . ID=g7094.t1.exon1;Parent=g7094.t1 NODE_294_length_27823_cov_40.9274 . CDS 24777 25475 . + 0 ID=cds.g7094.t1;Parent=g7094.t1 NODE_294_length_27823_cov_40.9274 . three_prime_UTR 25476 25492 . + . ID=g7094.t1.utr3p1;Parent=g7094.t1 #PROT g7094.t1 g7094 MTGTLEGKVAETAVAFASLLSVPIEVLDYHILPFLAQCDLASLSKTNSSLRKVVLRWRIFPLRRKFALEYGSSAAFRACVCAVLPKAQLMLQLRKSAVFNLSGFSGIHTLDLSNCSKVTNVSALGTVHTLILNGCNNVKDVSALGGVHTLHLSGCQKVTDVSCLGDVYALDLSNCPGVVDVSALGGVCVLNLTGCKNVVDVSMLGSVRVLSIAGTLASLTLKTEKMRSVSGR* # ORIGINAL: g7095.t1 original gene structure, not modified by PASA NODE_294_length_27823_cov_40.9274 AUGUSTUS gene 27377 27823 . + . ID=g7095;Name=g7095.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS mRNA 27377 27823 . + . ID=g7095.t1;Parent=g7095;Name=g7095.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 27377 27535 . + . ID=g7095.t1.exon1;Parent=g7095.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 27377 27535 . + 0 ID=cds.g7095.t1;Parent=g7095.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS exon 27619 27823 . + . ID=g7095.t1.exon2;Parent=g7095.t1 NODE_294_length_27823_cov_40.9274 AUGUSTUS CDS 27619 27823 . + 0 ID=cds.g7095.t1;Parent=g7095.t1 #PROT g7095.t1 g7095 MAAANGESHVRETVQEYYGKILKTSDDLKTNACCTGVKMPKHIREIISGLHDEVVAKYYGCGLTIPHVLEGKRVLDLGSGSGRDCYILSRLVGESGSVVGVDMTQEQVCNLCGLWKWLRYI # PASA_UPDATE: g7093.t1, single gene model update, valid-1, status:[pasa:asmbl_5290,status:12],[pasa:asmbl_5291,status:12],[pasa:asmbl_5293,status:12],[pasa:asmbl_5294,status:12], valid-1 NODE_294_length_27823_cov_40.9274 . gene 16116 24445 . + . ID=g7093;Name=g7093.t1 NODE_294_length_27823_cov_40.9274 . mRNA 16116 24445 . + . ID=g7093.t1;Parent=g7093;Name=g7093.t1 NODE_294_length_27823_cov_40.9274 . five_prime_UTR 16116 16293 . + . ID=g7093.t1.utr5p1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 16116 16404 . + . ID=g7093.t1.exon1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 16294 16404 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 16734 16898 . + . ID=g7093.t1.exon2;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 16734 16898 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 17117 17182 . + . ID=g7093.t1.exon3;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 17117 17182 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 17525 17645 . + . ID=g7093.t1.exon4;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 17525 17645 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 17819 17974 . + . ID=g7093.t1.exon5;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 17819 17974 . + 2 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 18408 18535 . + . ID=g7093.t1.exon6;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 18408 18535 . + 2 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 18733 18858 . + . ID=g7093.t1.exon7;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 18733 18858 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 19135 23569 . + . ID=g7093.t1.exon8;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 19135 23569 . + 0 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . exon 24042 24445 . + . ID=g7093.t1.exon9;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . CDS 24042 24199 . + 2 ID=cds.g7093.t1;Parent=g7093.t1 NODE_294_length_27823_cov_40.9274 . three_prime_UTR 24200 24445 . + . ID=g7093.t1.utr3p1;Parent=g7093.t1 #PROT g7093.t1 g7093 MSADAAPPVPNMAWDRAWSADEIKGNAGRWSLAGDAGMLLYLKDFSQRMTTRTHEIESQIDSFYWETEQTGARLYNIFNEFLLLSNTQFIENRVYEEEVVEGAQTDDKPADAQPEKTREQLEAEIIPKYQTAVKVCLDMINTSYVAKIQELPEPESDEEDIPADIKPDPTLEPKDTYMRPLPFIIGSHAFINDDTIGLGDASKAAEAASNEIVSEESSSEEEEEQQDARAPAIPSGSGPRAPAPDSGVQFSSDEESDFSDDESRRAPATAAIPPPMRPQMPAMPAMPHPPRRGNDDDSTLFGDSDEESDTRSARAESAAVPRGRGPTVSSAGDTDSVSQWSEAEAPTTNFRSKLAGQLGAPDIAAALAAKQRGRSVSIKSARAQSESSGFSDDKDDRGVNDGASEASDPFASDSLFKKRGKSTRSENLFGSDEEDQPPKQSAPHPKPQHALPPVPQMPQIPQQPQRKKATSVQDLFGDVKEEEGDLFADDTRTAAPPSKSLPKPPGKTLPAAPKSAAGAGLFGDDDDAPAAPPARALPKPPASAALFGDDDEVAEEEEEVAPPPRAAPKKVLPTPAAAPTKQLPKPQQQSLFGDDDGDSASVLSAEDNAQRRKASIASMMASQQGAGKRFPGGVAMFGPTAGDGADDSMDVADPRTQRGGTQRSTTSGSSGLFGDEEPEEQPVAAPPKKKLPAGAVSMLGGGDPFGTRRASASTRAQSVVVEEESTAAPPASRQATPFVAAAPPAKKASQALFGNEEEEEVRAPAVQPQPSKPTKPLPAPAAAAPKKALSLFGDGEEEEEDSSGLFGKPVAKAAPGKRTSIFDDEDGASPAPAAPSTAAPSKPVPSKPTAKTPGLSSIFDDDEDSGDLFGPPKAKAAAVAAVAPAAAAASKAGPTPTLAAAKKGPSLFDDDDASDVVAVVFDAAKGGALKKQPPPIKAGTAPKSSLFGDDEEDSGDLFGPPKPKAAVVAAAVAAPVPKKSLPSKPAGGIFGDEEDDLFTAPKAKPAPAAVAAPAPAPAPAPAPATVAPPKSASAGLFGDEDDGLFGGAKAAPPKKSLPSKPASALFGDEGDDSPLFGGKTEAKKAEPPKKALPQPASSMFGDDEVPAVAPAPKKEETKKEEPKKEEPKKEEAAKSKPASALFGDDDGGDDALFTAAPKKAEPPKKALPQPTASSLFGQEEDSPLFSASAVKKDEPKKEEAPKKALPSKPASALFGGDEEDDPLFVAKKTPVAAVAPAPTPAPAPTPAPAVVAALTPAPKASALFGDDDDGVSQPPPLAKEAPTKRTESQTSESGDSKINKLAAGLAIRPDMVSPAALAAKNQAQAPASTPADPFGEGAAASTLTHAVKERPKGTLRRPPTRPGRATASGSFEGEEDSPATSSVSSAQAVQAAAKAVESAPAPAPAAVPAKRASIFDKTDEESSMFAAAKKPEPSKPKEEIAAPAKKSALFGDDEDDGMFAPPPIPKATPTPTAAKSSLFGDDDGFAPPPIPKETPAPAPAPVAVAVVAQVPTPAAKKSALFGDENDDDMFAPPPIPKATPAPASAPVEEKAPEVAPVKKASIFGEGDEESAMFAAAKKPAPAQPREDKAPPAVARKSLFGDAGDDDDAPIIPPIKTPEPVKEAAPAPAPAPKDDGLRKSIESLADPDTADEVLKKEETSETPSALKKKTALFGDDEEENVFAGAASGKKATDTDKLFEGPPPTTPLGDGSKVAPAGSDKKKAKGLFDDDDGEDVFSGGKGGKTAAGGAEKEEGGDSRNRSKSLFGDEEDDTLFGAKFESNKGGKSKKKVAEKKPTAQSKKIFIFDDDTPSIFDDPLLGKKK* # PASA_UPDATE: g7090.t1, single gene model update, valid-1, status:[pasa:asmbl_5287,status:3], valid-1 NODE_294_length_27823_cov_40.9274 . gene 5565 8033 . + . ID=g7090;Name=g7090.t1 NODE_294_length_27823_cov_40.9274 . mRNA 5565 8033 . + . ID=g7090.t1;Parent=g7090;Name=g7090.t1 NODE_294_length_27823_cov_40.9274 . five_prime_UTR 5565 5797 . + . ID=g7090.t1.utr5p1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . exon 5565 5811 . + . ID=g7090.t1.exon1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . CDS 5798 5811 . + 0 ID=cds.g7090.t1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . exon 6019 6185 . + . ID=g7090.t1.exon2;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . CDS 6019 6185 . + 1 ID=cds.g7090.t1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . exon 6369 6462 . + . ID=g7090.t1.exon3;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . CDS 6369 6462 . + 2 ID=cds.g7090.t1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . exon 6817 6950 . + . ID=g7090.t1.exon4;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . CDS 6817 6950 . + 1 ID=cds.g7090.t1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . exon 7298 8033 . + . ID=g7090.t1.exon5;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . CDS 7298 7575 . + 2 ID=cds.g7090.t1;Parent=g7090.t1 NODE_294_length_27823_cov_40.9274 . three_prime_UTR 7576 8033 . + . ID=g7090.t1.utr3p1;Parent=g7090.t1 #PROT g7090.t1 g7090 MSWLFANKSTKTFKPKKNIPEGTKQYQLKKYAEATLGSGNLRLAVTLPEGEDLNEWVAVNTVDFFNQINMLYGTITEFCTADACPIMSAGPKYEYHWADGTTVKKPIKCTAPEYIDFLMTWVQNQLDDEALFPSKIGVPFPKTFLATAKNILKRLFRVYAHIYHSHFSKIVSLGEEAHLNTSFKHFIYFVQEFSLIEKKELQPLQELIDQLTAKDQAKELAAGAPSKS* # ORIGINAL: g12219.t1 original gene structure, not modified by PASA NODE_4062_length_2255_cov_34.9743 AUGUSTUS gene 301 1592 . - . ID=g12219;Name=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS mRNA 301 1592 . - . ID=g12219.t1;Parent=g12219;Name=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS exon 1575 1592 . - . ID=g12219.t1.exon1;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS CDS 1575 1592 . - 0 ID=cds.g12219.t1;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS exon 1310 1480 . - . ID=g12219.t1.exon2;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS CDS 1310 1480 . - 0 ID=cds.g12219.t1;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS exon 940 1093 . - . ID=g12219.t1.exon3;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS CDS 940 1093 . - 0 ID=cds.g12219.t1;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS exon 301 391 . - . ID=g12219.t1.exon4;Parent=g12219.t1 NODE_4062_length_2255_cov_34.9743 AUGUSTUS CDS 301 391 . - 2 ID=cds.g12219.t1;Parent=g12219.t1 #PROT g12219.t1 g12219 MYFSVWASVAFSLSPNDYATRVGEYLLTLPQQLEPFAVVDDVALSTALTAAQLLHEAHASRSKENAGRLSSDGSGQAERWLAAISGATMAAFAKHALQIGKMGPAGARQLAADLDYLSNVFAALDVSLNRELLLVRKLVEIEQS # PASA_UPDATE: g1454.t1, single gene model update, valid-1, status:[pasa:asmbl_7441,status:12], valid-1 NODE_4562_length_1457_cov_45.9819 . gene 2 1457 . + . ID=g1454;Name=g1454.t1 NODE_4562_length_1457_cov_45.9819 . mRNA 2 1457 . + . ID=g1454.t1;Parent=g1454;Name=g1454.t1 NODE_4562_length_1457_cov_45.9819 . exon 2 95 . + . ID=g1454.t1.exon1;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 2 95 . + 0 ID=cds.g1454.t1;Parent=g1454.t1;5_prime_partial=true NODE_4562_length_1457_cov_45.9819 . exon 269 402 . + . ID=g1454.t1.exon2;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 269 402 . + 2 ID=cds.g1454.t1;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . exon 577 731 . + . ID=g1454.t1.exon3;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 577 731 . + 0 ID=cds.g1454.t1;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . exon 843 945 . + . ID=g1454.t1.exon4;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 843 945 . + 1 ID=cds.g1454.t1;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . exon 1100 1231 . + . ID=g1454.t1.exon5;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 1100 1231 . + 0 ID=cds.g1454.t1;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . exon 1378 1457 . + . ID=g1454.t1.exon6;Parent=g1454.t1 NODE_4562_length_1457_cov_45.9819 . CDS 1378 1457 . + 0 ID=cds.g1454.t1;Parent=g1454.t1;3_prime_partial=true #PROT g1454.t1 g1454 NSPGVSITLPVTLVACESLGDNVIYQGSCVQVFSENQGLRNAFLALCAIGEVLAIVIFVFIVIYRSQDIIKASSPMFCSIIVAGCMLGYATVFTMVPTASNATCGLNIWFGHLAFTITFSALFAKNFRIMAIFNNRKMRQRLRATSDIFLLSIVAVVCSLCVIYLIIWSAVDIPERTAKFDASKNELRYTCESSSSVWAIVLYAAEAASLAWGVYLAWRTKAVPSKFRESKY # ORIGINAL: g14284.t1 original gene structure, not modified by PASA NODE_2381_length_6478_cov_40.6291 AUGUSTUS gene 26 4037 . + . ID=g14284;Name=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS mRNA 26 4037 . + . ID=g14284.t1;Parent=g14284;Name=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 26 292 . + . ID=g14284.t1.exon1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 26 292 . + 0 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 483 1183 . + . ID=g14284.t1.exon2;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 483 1183 . + 0 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 1425 1753 . + . ID=g14284.t1.exon3;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 1425 1753 . + 1 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 1945 2049 . + . ID=g14284.t1.exon4;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 1945 2049 . + 2 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 2314 2428 . + . ID=g14284.t1.exon5;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 2314 2428 . + 2 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 2645 3032 . + . ID=g14284.t1.exon6;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 2645 3032 . + 1 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 3204 3385 . + . ID=g14284.t1.exon7;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 3204 3385 . + 0 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 3537 3633 . + . ID=g14284.t1.exon8;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 3537 3633 . + 1 ID=cds.g14284.t1;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 3879 4037 . + . ID=g14284.t1.exon9;Parent=g14284.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 3879 4037 . + 0 ID=cds.g14284.t1;Parent=g14284.t1 #PROT g14284.t1 g14284 MFDEALRVAQQQQQQQQQQQQQQQQQQQSEYDTPFPIQFHPREGYVEANGTVEIEVQLARLPEIDTCSAYLVVTDLDAPSAAVAERVLKVDVIAGASVETAASSRQMRPISSGLKVPINASMLSEAQATLSGVMSPPAVPTLDDSQNVLGTTPMQLTSTADAKSATLILRGCTPIHPPAGTSVATGGCADDSSGVTLTYEVNLGQQNVGSGSVQWELSLENPHREHKLDYRIHPLRQDDDTSWLSINRSDGTLDPYSSHKVVLTLSTAKQAVLFTYVVVENMNVPTDLKIMRVMMEVVTSRGAGVGAPDGLFKVIAEGVEGDRMFINMGEVYHGQTYRNRSILIRNTSSMPLDFLLSTNLTPADRSELNFSLSRDMAKLFRTLTIDAESTVRVFLHFCPRRDIDPDAMADLDDGERLAEDSQPSSIHKIVEIYINCRLVKNYQKVVTLSAICLAPQIDIIEGDVFFKGYFQGTPIEGSTASVDEGVVFEPAYAKFVFKNLVNKDLKYLLRNDSQFFEISGPDGRLDSVLEGTRGATCEIVVKLRRDVILANLKQLLQERYIQEHVGVCNMRRPTEKHRLSMHVSLGYLAKFMRTPSPKGTHALVVLESHVLSVLRRFKAHLAADYMRLYEQARRKDGEEASKTTVAVVADFDLPPELKEMDDAVYLDYAYVVDELVYYGLNSYPGILFNLAHLLFTTLLGHKVFAVLSPSAMLVRPNKRVWPASLARWVFGLKFFLSYFPRPHAALAPLRALGTHLMLPDERLAVKPRQSNNKAVRNALS* # ORIGINAL: g14285.t1 original gene structure, not modified by PASA NODE_2381_length_6478_cov_40.6291 AUGUSTUS gene 4637 6303 . + . ID=g14285;Name=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS mRNA 4637 6303 . + . ID=g14285.t1;Parent=g14285;Name=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 4637 4677 . + . ID=g14285.t1.exon1;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 4637 4677 . + 0 ID=cds.g14285.t1;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 4876 4936 . + . ID=g14285.t1.exon2;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 4876 4936 . + 1 ID=cds.g14285.t1;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 5240 5408 . + . ID=g14285.t1.exon3;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 5240 5408 . + 0 ID=cds.g14285.t1;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 5643 5845 . + . ID=g14285.t1.exon4;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 5643 5845 . + 2 ID=cds.g14285.t1;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS exon 6100 6303 . + . ID=g14285.t1.exon5;Parent=g14285.t1 NODE_2381_length_6478_cov_40.6291 AUGUSTUS CDS 6100 6303 . + 0 ID=cds.g14285.t1;Parent=g14285.t1 #PROT g14285.t1 g14285 MATRALRPRAAKTAVHDENVSDAEEESPVQKTAKTEDQDADEQVNDANESESDAKGADSSSHEDEDEEEKVDAKAASRVPKRGPAKKAEEAKGGPETLYEIVRKGRAALQPVAEQWVTRYEKNKKVAVAELLSFFVHASGFNKYNVDTSMLNTGDAARGFEMLTEQIEDEGVDYPFKTASGKNRKFYLAFVELWDRIIKTIKESALYDGTVLELCITWLTAFSNAP # ORIGINAL: g14275.t1 original gene structure, not modified by PASA NODE_521_length_21887_cov_42.7563 AUGUSTUS gene 2247 3386 . - . ID=g14275;Name=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS mRNA 2247 3386 . - . ID=g14275.t1;Parent=g14275;Name=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 3266 3386 . - . ID=g14275.t1.exon1;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 3266 3386 . - 0 ID=cds.g14275.t1;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 3084 3121 . - . ID=g14275.t1.exon2;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 3084 3121 . - 2 ID=cds.g14275.t1;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 2730 2905 . - . ID=g14275.t1.exon3;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 2730 2905 . - 0 ID=cds.g14275.t1;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 2247 2562 . - . ID=g14275.t1.exon4;Parent=g14275.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 2247 2562 . - 1 ID=cds.g14275.t1;Parent=g14275.t1 #PROT g14275.t1 g14275 MPNPNKTYSVVIIGDGGVGKSALTVQYISNSFVTDYDPTIEDAYRKQTVIDDEVAVLDILDTAGQEEYSMMREQYMRTGEGFAIVFSVTSRKSFEAVRQLWRQALSVRDSDWVPAVLIGNKSDILGPERAVTSAEAKSLAKELGIVYIEASAMLRRNVDEGFQALVREIRRDQKEKRERAAPNKKKHARPTARRDKRSSVGAFIQRALHKLHITSH* # ORIGINAL: g14276.t1 original gene structure, not modified by PASA NODE_521_length_21887_cov_42.7563 AUGUSTUS gene 3767 6882 . - . ID=g14276;Name=g14276.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS mRNA 3767 6882 . - . ID=g14276.t1;Parent=g14276;Name=g14276.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 5268 6882 . - . ID=g14276.t1.exon1;Parent=g14276.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 5268 6882 . - 0 ID=cds.g14276.t1;Parent=g14276.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 3767 5076 . - . ID=g14276.t1.exon2;Parent=g14276.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 3767 5076 . - 2 ID=cds.g14276.t1;Parent=g14276.t1 #PROT g14276.t1 g14276 MHAQQSLPTGEVPGHLHAYISSELDVSAGEMGVFDASGQFGGSSVERVDNDTSFDDLFGNEVFVSVDVSVGGGSTSLLHVHADHDMVSRQLSDKMQTLRLYDSQREPSHTNASINSNLLTYQPPMQQLLSHAQHHYADQSYADPSVMSVAPYSIHNEYDAPAASGLYDGVGAETAPAVQKQKLKRVDRSLSLSRGRRSNTLTQQLSDADADGSYDAGPLGSPVTTHDGVFAVPYAVAPSVTQQQQQQQQQQQQQQQQYATMSSIASLASLHQQQQEQEQQQQALNRKKQQLQHQQIHLQQQFQQQQQQHQQQQLRQQPLDPMQARYLQQMHPRAKRELSDQVRENMGGDRFDSRGDAGSLLSAVGYATPAPSHGPTLVPRRKVQRKRSYSNPNLVSAVNATGAGFLQDQYGTAEAFHVIGGSFNSSIAQQQQQQQHSTGLSQESIEMIRRQLLFNNDLQHLQQHQQQQQQQQQNQQQQPRASEQTSYLDLALHNDISAADDSFDVDESAALFSEPEWGLYTKQPLMRKRSKSLSDLTRGGEIMGGDNFGNDGNYLGSGVSGLNLAQQFAPKQPQYGHPPPLGPTHPHTLSHAPAGWQTQPPAQPMAVHSLPGVVPAHGSQLFLIPNGNGSFALATQLLVQQPMQHIQQQQYIMPQPPIAVASPMAVPVVSVPQIVMPHMAARPAHGGGPMSVGTPASQVSMASPMSPDIGSPMSPMSTTSNSGDEPRRLLPKPTSKGIEWEFKMENETTIRKAPPGREEKKQEPRSLTTWQFQVDPSSPSFAADSNSSSAREPSSQSQSQSPQQPTPHTKATGASAKITGEDGIAASPQPTTLPSRLSLQEQLHQLHQQKQQQQQQQQQQQRPTPGTTVSQQQQLQQPQQAHPTQQQSQRSTPQSYAQAPVQTSRVSAPMSQQPTPPSQSQSQSQSRQRAQDWMTPRQKSSGKAWLFQAETGREKEEKAREREREKEKKESEKK* # ORIGINAL: g14279.t1 original gene structure, not modified by PASA NODE_521_length_21887_cov_42.7563 AUGUSTUS gene 18324 21452 . + . ID=g14279;Name=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS mRNA 18324 21452 . + . ID=g14279.t1;Parent=g14279;Name=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 18324 18350 . + . ID=g14279.t1.exon1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 18324 18350 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 18476 18591 . + . ID=g14279.t1.exon2;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 18476 18591 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 18769 19050 . + . ID=g14279.t1.exon3;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 18769 19050 . + 1 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 19189 19250 . + . ID=g14279.t1.exon4;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 19189 19250 . + 1 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 19386 19453 . + . ID=g14279.t1.exon5;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 19386 19453 . + 2 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 19717 19809 . + . ID=g14279.t1.exon6;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 19717 19809 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 19965 20114 . + . ID=g14279.t1.exon7;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 19965 20114 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 20668 20769 . + . ID=g14279.t1.exon8;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 20668 20769 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 20980 21072 . + . ID=g14279.t1.exon9;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 20980 21072 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS exon 21330 21452 . + . ID=g14279.t1.exon10;Parent=g14279.t1 NODE_521_length_21887_cov_42.7563 AUGUSTUS CDS 21330 21452 . + 0 ID=cds.g14279.t1;Parent=g14279.t1 #PROT g14279.t1 g14279 MADVEQPQGDAHMVLPLKTIVFRSLKRTHDMFLSNHGKPVVVGDAHDSKRIRVSCRVRDEYEGVLAMPPAPTQRQSAVEGGPTANPVPLRLIEAPPPVVKGVHAYPSAPGVALSDDTAAAPRQIPQSSVDQTQQKLRHTREQLALISSTKPGIADIKEKTRGALTVRSAPVVPKPQWHAPWKLMRVISGHTGWVRAVAVDPSNKWFATGSVDRTIKIWDLASGTLKLSLTGHVAALRGLAVSNRHPYLFSCAEDKSVKCWDLETNKVIRLYHGHLNGVYSIDIHPTLDVLMTGARDATCRVWDMRTKSCVHILQGHTDTVGSVKAQALDPQVVTGSYDSTVRLWDMRNGKTLSTLTNHKNGVRALSIHPRE* # PASA_UPDATE: g14274.t1, single gene model update, valid-1, status:[pasa:asmbl_7942,status:12], valid-1 NODE_521_length_21887_cov_42.7563 . gene 218 1589 . + . ID=g14274;Name=g14274.t1 NODE_521_length_21887_cov_42.7563 . mRNA 218 1589 . + . ID=g14274.t1;Parent=g14274;Name=g14274.t1 NODE_521_length_21887_cov_42.7563 . exon 218 497 . + . ID=g14274.t1.exon1;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . CDS 218 497 . + 0 ID=cds.g14274.t1;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . exon 608 782 . + . ID=g14274.t1.exon2;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . CDS 608 782 . + 2 ID=cds.g14274.t1;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . exon 971 1113 . + . ID=g14274.t1.exon3;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . CDS 971 1113 . + 1 ID=cds.g14274.t1;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . exon 1395 1589 . + . ID=g14274.t1.exon4;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . CDS 1395 1423 . + 2 ID=cds.g14274.t1;Parent=g14274.t1 NODE_521_length_21887_cov_42.7563 . three_prime_UTR 1424 1589 . + . ID=g14274.t1.utr3p1;Parent=g14274.t1 #PROT g14274.t1 g14274 MKDSGSEARVARRIRMEMRTLEELIAAKDEIIKAKDETLKMSEATLAAKNETLTKTLAAKDETLKQLKEVVHLHRKEHLQRIGAYHRAARWRIWLRKGVDNATLKDKELDQLVKTIVSNISNVYSRLSHDVHNPDGTDDGIPIMSTMPEAHRLWRNDTVRTHCPWVDVATSECLLWRSQVRLITYASWLRGFFGLGRRVDRFSENMRV* # PASA_UPDATE: g14278.t1, single gene model update, valid-1, status:[pasa:asmbl_7940,status:12],[pasa:asmbl_7941,status:12], valid-1 NODE_521_length_21887_cov_42.7563 . gene 10298 17413 . - . ID=g14278;Name=g14278.t1 NODE_521_length_21887_cov_42.7563 . mRNA 10298 17413 . - . ID=g14278.t1;Parent=g14278;Name=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 17347 17413 . - . ID=g14278.t1.exon1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 17347 17413 . - 0 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 17169 17231 . - . ID=g14278.t1.exon2;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 17169 17231 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 16419 17060 . - . ID=g14278.t1.exon3;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 16419 17060 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 15869 16268 . - . ID=g14278.t1.exon4;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 15869 16268 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 15102 15733 . - . ID=g14278.t1.exon5;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 15102 15733 . - 1 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 14330 14683 . - . ID=g14278.t1.exon6;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 14330 14683 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 13763 14093 . - . ID=g14278.t1.exon7;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 13763 14093 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 13244 13557 . - . ID=g14278.t1.exon8;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 13244 13557 . - 1 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 12169 13047 . - . ID=g14278.t1.exon9;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 12169 13047 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 11558 11940 . - . ID=g14278.t1.exon10;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 11558 11940 . - 2 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 10995 11362 . - . ID=g14278.t1.exon11;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 10995 11362 . - 0 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . exon 10298 10748 . - . ID=g14278.t1.exon12;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . CDS 10499 10748 . - 1 ID=cds.g14278.t1;Parent=g14278.t1 NODE_521_length_21887_cov_42.7563 . three_prime_UTR 10298 10498 . - . ID=g14278.t1.utr3p1;Parent=g14278.t1 #PROT g14278.t1 g14278 MAVPISDSVVRKLVQLDRDLEDGDVTEKGYDKKRATLLAPHGGENALLRYLSTHPEAAGRVKACPRTQSVSECGPDSAGMSHPRTLSDSTTASPSTARRVPEDAVSSSDFNARKEALKNGLGGIGARGMSSPALPVSAPSTPAVQRAAASSGGGPPPPPMLSAGGRVASSSSLKPVGPSMNIPLPPPVVGMPPPLPATGGVSPRPNPVSLAASPRATPSMERGGSCGNLLGDGLSSPRGADSEDGGRASLPTVNEPLAGDQEGKSNKALSSRIQQLMAALQSNPSAPKKQFMRSGDGDAPKALDPNAPKPTGRVMDPLTIQPQALPHDEHRLTDEAHLATLGDLARVRGHGALSKKTALSVLDARGKETAMLSYFKLAKQAEQLAYALSHRFGVNNGDRVAIVLPAWQADVFVWAFYGCAMAGAVAVPVTSPSSIDDPGVAQSAFLLSGCGVRVALTTEAARKDHPRDDNGRPAPLRGWPKMEWYVIDSLPRVPGQAQALSGGGKPSNAPAYVEGSVTETGEVKAIHVSHAAAICAARALAASLQCTSSSTLVMALDCASSPGLWFGALLGVYAGLHTVVIPYATLQQNPAVWMASVSKFKAQFAVSITPALALCVSSVPDKERKALKLQSLRGVVAIAERFPADVARAFCTGFAIPDPVLCACFAAPETLAVSMRPPSQTPVKVSIDGRAAGFGLVNLVSAGTPGAMTLFDSGSALPKAKVALISPGKQPLICRTDEIGEICVHAPSVGSGYWGLEGKSAVAFQVKPSNARDDSELYVRTGWLGFVHDARLFITGGVGHRVMSEGRYISLDDIQKTVLSIKPTPINKDRVAVFAVTVYEEERICVVFESAAGPGEPLSKYVDTVVATVEEVQSVPLYAVLAVPPDNLPLTREKIVHSFNCKKAFISGALSPVHVVMRPTTVTNLPKATPKTNEALKMLGDAITGAQLADSHGADVERVNDDASGRSLDEFRSLPEILRWRATATPDAPAFTAVDSVGRDATVMSFGRLHAEATRIALFLTERAGLHAGDNVALVFPPSVEFVVALYACMYIGAVPVPIRAPPPNVTARPWVPTSKRIVDMADARAVLTCESVVRALRQKDVAPLMEGWPLVYTVEDAPKKKAEMNYYKPPTAELLSHIEFSISANGVLAGIKFAHETVTSFCRAHKVAGKLPSNRVVIVCADPVNGAGLAFSSFVGVFCGFPTVIVSPADLQQNPSVWFATIGRYKAIATIAACPVLELCMRALSKNTPPALTGSLSSLKALLVDSPERPRADLLAMFAAAFASIGLQSDAIDSPFTCAANATVAMRTGDASGKATRSGTLDAVYLELRGLRQDRIELVERGSPNSICVPSSGKLLPRVKVAIVHPDTGRACMGKDIGEIWVSSPHNGKGYFGLVKVINDELSKAHFHCAVANGNQSLQYARTGYLGFLSKASGGAESLYVVGAIEETFLVEGYRHFAVDVELSIERSHRKIADGGCVVFRSQKLLVAVVEVIDQADLLSLVPVITSTALDEHGLVLHVIAFVPPRTIPLNARGQKQRIRLRDGFVAGGLDPIHVAYNV* # PASA_UPDATE: g14277.t1, single gene model update, valid-1, status:[pasa:asmbl_7943,status:3], valid-1 NODE_521_length_21887_cov_42.7563 . gene 8023 9641 . + . ID=g14277;Name=g14277.t1 NODE_521_length_21887_cov_42.7563 . mRNA 8023 9641 . + . ID=g14277.t1;Parent=g14277;Name=g14277.t1 NODE_521_length_21887_cov_42.7563 . five_prime_UTR 8023 8179 . + . ID=g14277.t1.utr5p1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . exon 8023 8235 . + . ID=g14277.t1.exon1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . CDS 8180 8235 . + 0 ID=cds.g14277.t1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . exon 8350 8429 . + . ID=g14277.t1.exon2;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . CDS 8350 8429 . + 1 ID=cds.g14277.t1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . exon 8547 8713 . + . ID=g14277.t1.exon3;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . CDS 8547 8713 . + 2 ID=cds.g14277.t1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . exon 8878 9641 . + . ID=g14277.t1.exon4;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . CDS 8878 9579 . + 0 ID=cds.g14277.t1;Parent=g14277.t1 NODE_521_length_21887_cov_42.7563 . three_prime_UTR 9580 9641 . + . ID=g14277.t1.utr3p1;Parent=g14277.t1 #PROT g14277.t1 g14277 MGATASTSNGAVSPDNNAGILSMPVEMELTSVLADGNSDTGSRMRGSMTDISVTSADLKPEHYKRGAAQLPDHNGLSLVFEDKMDLDAANLLQAYVRGYIVRKTGRVPRFRMRPNEDGNATLIQQRRRSSILPYTSALRMSTAALSRAENRRQSLLASEISLDKRAENTPGGRMSFARASISSVGERYPVPGRARFSVDDASTVESPPLQRTQSGSILRRPGGTSSPHDSLTSLTGGDASAQRNRSGEVSRTTSRTGGSRPGSAKRITGDAERTKSVTFGAAIIAPTGSSGGRVADAPERASDRPEKQRVKGADVRVSSPLRSGVSASDLLADE* # ORIGINAL: g3266.t1 original gene structure, not modified by PASA NODE_2993_length_4577_cov_39.6759 AUGUSTUS gene 1414 2917 . + . ID=g3266;Name=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS mRNA 1414 2917 . + . ID=g3266.t1;Parent=g3266;Name=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS exon 1414 1992 . + . ID=g3266.t1.exon1;Parent=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS CDS 1414 1992 . + 0 ID=cds.g3266.t1;Parent=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS exon 2211 2382 . + . ID=g3266.t1.exon2;Parent=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS CDS 2211 2382 . + 0 ID=cds.g3266.t1;Parent=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS exon 2544 2917 . + . ID=g3266.t1.exon3;Parent=g3266.t1 NODE_2993_length_4577_cov_39.6759 AUGUSTUS CDS 2544 2917 . + 2 ID=cds.g3266.t1;Parent=g3266.t1 #PROT g3266.t1 g3266 MAAILQKVKDVTVGVRAWIPFSFTISTAPVFSATWLVVRAVTLPLPQSAFHTADACMFDLYQGLVASLSGKFNGVEVHFHGDKMPTKKENVIFLSNHQSAADWMVVDQIAMRRNCMGRLRYLMKEGLKLVPLYGLYFKQHGCIFVRKSFAHDEKRIIETLRKYKSNKVPVWLVIFPEGTRYSPTKPHLLEASQAFSRERNMPVMDHVLVPRTKGFEVCLEGLRDYIDAIYDITIVYGSSSARRTPVPSLIQFLTGRFDRLDVHIRRIPASEFPSSEKSGAWLHEEWAAKDRLVSYYHQHNATEVNAPYKFSDDDVSWTEPVSVTKAGAYVAFWLLLVAPVFGTHAGRVAYLKMWLFGGAISTACMYVHSRILKW* # PASA_UPDATE: g3267.t1, single gene model update, valid-1, status:[pasa:asmbl_5356,status:12], valid-1 NODE_2993_length_4577_cov_39.6759 . gene 3291 4559 . + . ID=g3267;Name=g3267.t1 NODE_2993_length_4577_cov_39.6759 . mRNA 3291 4559 . + . ID=g3267.t1;Parent=g3267;Name=g3267.t1 NODE_2993_length_4577_cov_39.6759 . five_prime_UTR 3291 3681 . + . ID=g3267.t1.utr5p1;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . exon 3291 4014 . + . ID=g3267.t1.exon1;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . CDS 3682 4014 . + 0 ID=cds.g3267.t1;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . exon 4282 4421 . + . ID=g3267.t1.exon2;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . CDS 4282 4421 . + 0 ID=cds.g3267.t1;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . exon 4532 4559 . + . ID=g3267.t1.exon3;Parent=g3267.t1 NODE_2993_length_4577_cov_39.6759 . CDS 4532 4559 . + 1 ID=cds.g3267.t1;Parent=g3267.t1 #PROT g3267.t1 g3267 MADEEQLTGKGTLTKWKQMEAAALMKSVDSMKLDGIPAWKKDLLDKKKGSGVPGAPAEHNDASEPEWVKALKERQKRPAKPSESNRAAAASSKFNTVERSNISLLGSVTIPSEPPLIKKPEPEPEVDQSMDACVPGYQPPPQKSDEEIAETRAAKKVRYSQLRRVV* # PASA_UPDATE: g3265.t1, single gene model update, valid-1, status:[pasa:asmbl_5357,status:12], valid-1 NODE_2993_length_4577_cov_39.6759 . gene 69 279 . + . ID=g3265;Name=g3265.t1 NODE_2993_length_4577_cov_39.6759 . mRNA 69 279 . + . ID=g3265.t1;Parent=g3265;Name=g3265.t1 NODE_2993_length_4577_cov_39.6759 . five_prime_UTR 69 69 . + . ID=g3265.t1.utr5p1;Parent=g3265.t1 NODE_2993_length_4577_cov_39.6759 . exon 69 279 . + . ID=g3265.t1.exon1;Parent=g3265.t1 NODE_2993_length_4577_cov_39.6759 . CDS 70 159 . + 0 ID=cds.g3265.t1;Parent=g3265.t1;5_prime_partial=true NODE_2993_length_4577_cov_39.6759 . three_prime_UTR 160 279 . + . ID=g3265.t1.utr3p1;Parent=g3265.t1 #PROT g3265.t1 g3265 WGYTDSKYAYKSGVQMIAVKKMMDAIMGN* # ORIGINAL: g6423.t1 original gene structure, not modified by PASA NODE_2050_length_7923_cov_44.1207 AUGUSTUS gene 4671 6224 . + . ID=g6423;Name=g6423.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS mRNA 4671 6224 . + . ID=g6423.t1;Parent=g6423;Name=g6423.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 4671 6224 . + . ID=g6423.t1.exon1;Parent=g6423.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 4671 6224 . + 0 ID=cds.g6423.t1;Parent=g6423.t1 #PROT g6423.t1 g6423 MTADQIFLAMPQDYGAKYLDTMGRRIIALVGTIFFACILGIQAHAALNESSSSTFPSQSGEPIVTCCSVELSLFPPMLLPGGDALLTVRITDSLNRDVAPIVDDHGRRMHVVIVSENMDGFQHVHPEDFSSGGTSTIGSGSSLSSLSGTATASSTGVSVHVTLPNKGRYTILISYRTIDSDASVSDRSARFTLTVSGSVSPNATAQSAYIPHHDAKRLVRGVLFAANDSLTAQFSMASLESIFTTTALPVARDNNNTGSNGNGNGSIGVTATATPYAPAARPMAQGVYTVAAGIASLANDNDTSLDTASGGNFLQTYALECVAIVFTVRNATTGQPVQSLASFIGAAAHITVVATDLTYAAHEHAMPTSTYSAVNGVAVVGDGLPVVDPRDHDHSPGGGDFATRRRRASAVDASCQVTSEEHTHMNSTAMFGPSVLTMLRFPSRGAYRLFLQVKDAQGGDFGTGVLAAFDVSVSAARPAAAPTDTDTVLTSNGGSSTMASLALVTAAIASALAFHFL* # ORIGINAL: g6422.t1 original gene structure, not modified by PASA NODE_2050_length_7923_cov_44.1207 AUGUSTUS gene 293 3693 . + . ID=g6422;Name=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS mRNA 293 3693 . + . ID=g6422.t1;Parent=g6422;Name=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 293 424 . + . ID=g6422.t1.exon1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 293 424 . + 1 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 609 747 . + . ID=g6422.t1.exon2;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 609 747 . + 1 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 958 1160 . + . ID=g6422.t1.exon3;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 958 1160 . + 0 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 1303 1438 . + . ID=g6422.t1.exon4;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 1303 1438 . + 1 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 1811 1960 . + . ID=g6422.t1.exon5;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 1811 1960 . + 0 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 2113 2255 . + . ID=g6422.t1.exon6;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 2113 2255 . + 0 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 2554 2635 . + . ID=g6422.t1.exon7;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 2554 2635 . + 1 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 2869 2946 . + . ID=g6422.t1.exon8;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 2869 2946 . + 0 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 3196 3296 . + . ID=g6422.t1.exon9;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 3196 3296 . + 0 ID=cds.g6422.t1;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 3546 3693 . + . ID=g6422.t1.exon10;Parent=g6422.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 3546 3693 . + 1 ID=cds.g6422.t1;Parent=g6422.t1 #PROT g6422.t1 g6422 WDDAFQLLEHHPELRDEVLVPHAQWLVQSDRFDEAQKAYRKAGRRDEALKILERLAHNAVIEARFDDAAYYMWSLAAETLEAARPGNAVAAQSETAMSKPGMTLSGLAHAHSVTNTNATASTARTPGTGSKKQLVALQKFRDLAEKAELYYAYHTVHRYMEEPFTSHLPQSVFNMARFLMHRMMKETPIGISRATVLYALGKQARHLGAHKLARFAFEKLQSLVVPTKWQESIDLGSITIRAKPFSDREDMLPLCYRCSTTNPLLNNQGDQCINCRQPFVHSFHTFEGLPLVEFVLEDTISDDEAMQLISTEPRQQRRKSLAKWQERNTLKTEEDGGDSDKDDDPFAARVLTMVQGGSEFSAVRVAKSHLLNMHKSEVYVKRWPEPLRYQYFRSVMPDVAIAMCPSCFHFFHADEYEFVVLQRKACPFCRAPASNL* # ORIGINAL: g6424.t1 original gene structure, not modified by PASA NODE_2050_length_7923_cov_44.1207 AUGUSTUS gene 6858 7289 . - . ID=g6424;Name=g6424.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS mRNA 6858 7289 . - . ID=g6424.t1;Parent=g6424;Name=g6424.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS exon 6858 7289 . - . ID=g6424.t1.exon1;Parent=g6424.t1 NODE_2050_length_7923_cov_44.1207 AUGUSTUS CDS 6858 7289 . - 0 ID=cds.g6424.t1;Parent=g6424.t1 #PROT g6424.t1 g6424 MSGRGKKTAETKAKAKSRSSRAGLQFPVGRIHRLLRKGAYAERVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRINPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIHNVLIPKKTGEKGEKAEKSKDSKTPSQSQEY* # ORIGINAL: g1952.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 67155 68009 . - . ID=g1952;Name=g1952.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 67155 68009 . - . ID=g1952.t1;Parent=g1952;Name=g1952.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 67155 68009 . - . ID=g1952.t1.exon1;Parent=g1952.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 67155 68009 . - 0 ID=cds.g1952.t1;Parent=g1952.t1 #PROT g1952.t1 g1952 MSAKPAIDWSLHANRHAIKDLELAVHRIDDRMKDETEEVGQDFKAWFNPMNFKHFPIFTLLVTFAEIGLYIAMIKDSPRGEGVTKPFSGDTLDHYGALMYFRIEDGGKSAWRFFTSIFVHVMPLHIISNMATQVLLGVIIERNYNGLRLAAIYMIAGLAGSLFSASFELTQGMGMAGASGAIYGLVATFMGHWIKNREQVTYPIFMGLWIVSFIGSTIIQTVFWGAGVSNWAHGGGFIGGLVGSISVLPNYEVEWWEKYVIWIARILLVGIFIALPLYIHFVKF* # ORIGINAL: g1954.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 73074 74360 . - . ID=g1954;Name=g1954.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 73074 74360 . - . ID=g1954.t1;Parent=g1954;Name=g1954.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 73074 74360 . - . ID=g1954.t1.exon1;Parent=g1954.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 73074 74360 . - 0 ID=cds.g1954.t1;Parent=g1954.t1 #PROT g1954.t1 g1954 MVTEKGQLAQALKKYSTVACLSRGENVCRDFDHDQTYFKVTNADENHFGFQYQDGYNFDTVEFSPIGECSAGGLYFTNARNVWKFQGYGIYLRVVKVPRNIAVYADSDSEKWKAPVLFFGERNKLNSVEAYEMLIREPGGIDSIGPLMLYCGYFASKVDDCVDKDAATSEHVEVFLWIAYTGCVDKFVRLAQNYITNGKISLARVIDICAESNAILHAVLKTVVLPHFAEQQTPRHRIQHVRHTDETPTILMDLSGLDLEAFRAVLQKTEAVVAGSYALKHFMGADYDAGDVDVFCPGETVHHLYDFFAQYGNLTLTYEPGCEREYGQYVVKECRVGPTRFQIIDIGSSSLAQVLAGFDLSFCEVMYDGKNLSTVHYETHDWKGRVTVDLSSKTMSSIAKTIARMVKYAQRGFHISNASEFLDNLRIL* # ORIGINAL: g1950.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 65049 65390 . + . ID=g1950;Name=g1950.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 65049 65390 . + . ID=g1950.t1;Parent=g1950;Name=g1950.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 65049 65390 . + . ID=g1950.t1.exon1;Parent=g1950.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 65049 65390 . + 0 ID=cds.g1950.t1;Parent=g1950.t1 #PROT g1950.t1 g1950 MDEAQKAVEAIAGCMFAPAWILFSNYVFALVGPVEYFSEQDLAMALMRVKASDATLGVDECRTFLIETGVSPWEIIGAYRYSVRYAPAVHGRLLRMTFAHNCACPPRTTGEST* # ORIGINAL: g1948.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 59894 61066 . + . ID=g1948;Name=g1948.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 59894 61066 . + . ID=g1948.t1;Parent=g1948;Name=g1948.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 59894 61066 . + . ID=g1948.t1.exon1;Parent=g1948.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 59894 61066 . + 0 ID=cds.g1948.t1;Parent=g1948.t1 #PROT g1948.t1 g1948 MADTKPVVKQTRGGLRMSVKSPTSTTTMGFDLLANPSKFILPPPPTDTEGTAKTATATAGRPRGAPRKKISGDVRESDSDSDADLSTGKADSSKTEDMSATSVSNVSNASNAKSKPKQAAPKPSLVTSARPGITLTGAAGKQSVAVSTHQQPKPVKTVVAQPVQVPVAASVALPKSPAVERHELLLKLFVLKKNGYVPEIKITRSTSMQELREEFEHLDRIRRMNTSIRTNKGYVVMAAGAIEMLNNWLNPFEFDLEGWSENLQINIDEHEDIFEDLYEKYQDSKPLAPEIRLIFAMVVSMIAYGTVGNALGNPVKNRIVGEVGQKIRQHTIRAPAPPAAPPAAPPAAPAAQSTKQKTQSPQIRGVNIGAIKVQVNKIPTNEELMAAFGE* # ORIGINAL: g1927.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 11745 13561 . + . ID=g1927;Name=g1927.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 11745 13561 . + . ID=g1927.t1;Parent=g1927;Name=g1927.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 11745 13342 . + . ID=g1927.t1.exon1;Parent=g1927.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 11745 13342 . + 0 ID=cds.g1927.t1;Parent=g1927.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 13543 13561 . + . ID=g1927.t1.exon2;Parent=g1927.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 13543 13561 . + 1 ID=cds.g1927.t1;Parent=g1927.t1 #PROT g1927.t1 g1927 MLLLDHYIASSHNTCLGGRQVFDTASAQCFFDFLKEFNGGCVEVDLGSVVSVSRATLESCANSQLNALEDKDTRFQLPSDNYMSMLPNGSTFHDVEVTHPYGMITPTYLSLVLYVVNKLVWAEKMTVILSIDNKQKFSTADTKIIWGLLDKFLDVRTCVETNHCKLVDSFYSKSHKTVEDLRGKAIIRWDDRSDLGIGDPAWNMKIGDLPNVVTLNTGIKFGRIDVLYSSGRWYFLDKAISSDGLLTFFKSIQHKSIHLKIYYNAGDYQPVVEALVKVGFSHPNAAKAKKAHISLNKLTASVKPLRSGSWADLYFNHNKTDAHLTTLWIQSVKSWMNFYKASSKLLASGRSLSSMTDEAKIKFKNIRVLYNRYLVAFARTVQTVSPNESSVNDIVAKKGMPRVTPFASSSEMANEINEVANLDAKLYAIPRNYIQLSEVAAAANRPAEILTIFASMMSPIEFEHETKRHKQRHILSKNVVVSFPAPSKILPEKADQRWIENSSDVIFRTYPPASIWNFWQSQVMSANYNPYFQPHWRT* # ORIGINAL: g1922.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 3771 4997 . + . ID=g1922;Name=g1922.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 3771 4997 . + . ID=g1922.t1;Parent=g1922;Name=g1922.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 3771 4997 . + . ID=g1922.t1.exon1;Parent=g1922.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 3771 4997 . + 0 ID=cds.g1922.t1;Parent=g1922.t1 #PROT g1922.t1 g1922 MEENVEETLVYQPPSGRFEASSLRIDTYTIIGSIGVKPNITEIARHCVPTMDGFMFIRMHEKIKAGKKFDLTQEQLEQVGGSMRYDKCEFSTKVYEDTTKDRIVMYAKGCDECDKELKAKRMENQQSFNNQVTLDVATVDDRFANIMLFTSGTFKMTGAVNDEEQLIAMSTLIRTLNVVGKNVLTGEPVLFVPSHINDMPTISMETSSVFCVFSVNFKVKLAALRDIILSAYPEDKWSAVTTYSKPTKGCKVSKQTSKVLTCNKEQLESIRSYQNLPYGPRVKQLISAMPMWARFDTRASLPITVSIGNDIPNLDAASANVADNLVLDVSSEHNPAITVFNSDRTTSGQKKSNITVRAKTTKGQAFAIYKFLIELFDACYEDIHPPETRRVIKVARTGTDRRATTVLS* # ORIGINAL: g1933.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 29210 30889 . - . ID=g1933;Name=g1933.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 29210 30889 . - . ID=g1933.t1;Parent=g1933;Name=g1933.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 29210 30889 . - . ID=g1933.t1.exon1;Parent=g1933.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 29210 30889 . - 0 ID=cds.g1933.t1;Parent=g1933.t1 #PROT g1933.t1 g1933 MNVQAAPAALTAPAEAKPKAKRTKKAEPPPPVPIEPIKLYPSQEEHVVRLNAILKKHPFALDFSMLGAGKTYTASHIALHDGFKHVIVIAPVSVKPKWDVMKSKHGVPVRHNLSYCELRTVKCKQPKHGLLHRRDYTIQMTRKPNAINGRPDEELIDVDKVEFTPSEQFKTMVAEGVLLIMDEIQNVKNITSQFAACQALIKTIVTADGGKSKALLLSGSPIDKECQAVHMFRTLHVMKSDMLAVFDLRDYTLEWRGMNDIVTFCEGLDNFTTQSIVALSTNNREGEGALNKLCYRLFQDVVKNHVSSSMMPPSVNTQLIKRNAYYFVRDESSLDLLANAVGSLGKASGYDGNRHTVHFANTGVESLRQISRAMLQIETAKITTFNRIAREMLLADPNRKVVICVNYTATIGDLVAQLAEFNPLVLNGELTVGKRKDVLDKFQAGNTKYRLLIGNMGVCSTGIDLDDKFGTFPRFALVNPNYSTISLYQLAHRFQRADSRSDATIYCLYGKQTPEVRILDALARKSNVMKETVTDQVRAGIVFPGDYEAVEEDDPPATV* # ORIGINAL: g1951.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 65723 66736 . - . ID=g1951;Name=g1951.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 65723 66736 . - . ID=g1951.t1;Parent=g1951;Name=g1951.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 65723 66736 . - . ID=g1951.t1.exon1;Parent=g1951.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 65723 66736 . - 0 ID=cds.g1951.t1;Parent=g1951.t1 #PROT g1951.t1 g1951 MTVTGAPFSVLFNFTRTNMPMVDIVVGMGTTTCRFSGVTDNPYIVQIYETQLVTDCKFTAKNLNVNGSASAVFDGSVSVKETDTVPYILNAIAYQANVRLIRSLQVTAGTAFLLDVSNAVDVNVTQNLFIASNIVPCYLTGSDVTDLRVVGGSRVCLRQIIQSNLAKSLVLSSVQDVAVRSADGSLIISLTSPVALLSEKNGRIYNVSDMIAQKGYIDLWIVVPNVECVGCTVKSVVNLQFNASSVQRRSVEDATGVSKRSAATDSYWTTSDIGLTITAVRQSGDPTTPTDSKSSSNKALQYGLGFGLGFGLAAVCVGAALMYIKRRRGLTQRHATP* # ORIGINAL: g1943.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 52393 53757 . - . ID=g1943;Name=g1943.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 52393 53757 . - . ID=g1943.t1;Parent=g1943;Name=g1943.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 52393 53757 . - . ID=g1943.t1.exon1;Parent=g1943.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 52393 53757 . - 0 ID=cds.g1943.t1;Parent=g1943.t1 #PROT g1943.t1 g1943 MSSVIARTSQGQFKQETLKTRIRKVIALTSQAGGTVDLAAGRISSGKKLMCSLDDIFKEFGSYEYIKSGSTGHTFKLTKNGTEYAMKIVAYTNKMYGNPQTDDNRPENAEIRMIDLLVSTFVLTKKTPHLILRVNSCYIPLDELVHNDMLKQLRVVKEKSFNEFVTRYENGKFHDEASVLVCEWANGGDLLDYLKNNYNKKLLGAEVVGGVVTDSAAFMLEAWRSILFQIVFNLALIQEQFPAFRHNDFKANNVLVKKIPCVANINLEANRFLYKLDDLEYSVPNTGLRTFMWDFDFACIPGVIDNTKLDNEWATDLNIRPIKNQYYDIHYFFNTLPSEGFFSDTTEKPSVRGDFFKSSFIPQQIKDFVNRVVPEKYRGKSTFVRKGRIICDDEHTTPKKLLQTDELFRPYREKMAQFRTQQRLKCEQRQRAQQRAQLQQRQPHPPPSRTSTRW* # ORIGINAL: g1936.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 38185 39528 . + . ID=g1936;Name=g1936.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 38185 39528 . + . ID=g1936.t1;Parent=g1936;Name=g1936.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 38185 39528 . + . ID=g1936.t1.exon1;Parent=g1936.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 38185 39528 . + 0 ID=cds.g1936.t1;Parent=g1936.t1 #PROT g1936.t1 g1936 MHAGWETVRLEVRVRPEVARWLEVVQGDGDAVATALEAAKAVMELAASSSTSGRPLLDKIKRLETEMAAAVESHTRELAGVRDKESALRQGEIEQLRRQIAEKNSQLSEMWSQIRTELAMIRGDEVRKLQDAVKEREFEIKALKTMNCVKGAQGEELILRALQATFKESAVTHTGKTAHECDIHLTDTVGQAVGRTIAFESKFKATITRQDVEKFQFDVNNLATSAKQGQPIIGSVFVSILSSNIPAKGNMLIELIAPTESLAHSVPVMYLGFSSQNEFMEQFPSVVTVFHRFANVMYAAHEATRGGDAAKNKAEREATNATVQQVVAMFQTLSANQGRIEQFKVQVMKFANDLAADNATVLKHVDEILARHGVNPTLAIAPVQTVAKKGGKNQYTCDQCVEVFTNKKTHATHQRACARSAAPHGLSNAQQVSNELGVSIDQSLSSM* # ORIGINAL: g1925.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 9254 10021 . - . ID=g1925;Name=g1925.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 9254 10021 . - . ID=g1925.t1;Parent=g1925;Name=g1925.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 9254 10021 . - . ID=g1925.t1.exon1;Parent=g1925.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 9254 10021 . - 0 ID=cds.g1925.t1;Parent=g1925.t1 #PROT g1925.t1 g1925 MINKVAMGKRLDPSCCLILDDCMYDTKFSKDLGMKYVFCNGRHDKMNAIITMQYPLGIPPMLRSNIDYVFILRENNIKNRKILHDNYGGCVDFPMFCKIMDSCTENRKCLVVNNCCNSGDPSEIFFWYKAQLHDNFRLGTNHTWRYWKKRHQEAMQRKSELEKGKNVPPIVQNVQLGKGKKGAAIVVKCEGDEPPPDVAKPDKRKRADKANKADKADKTDKTDRTDKTERTKKKTDTERRSEKKRSTSTTVAPGG* # ORIGINAL: g1930.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 21814 23403 . - . ID=g1930;Name=g1930.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 21814 23403 . - . ID=g1930.t1;Parent=g1930;Name=g1930.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 21814 23403 . - . ID=g1930.t1.exon1;Parent=g1930.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 21814 23403 . - 0 ID=cds.g1930.t1;Parent=g1930.t1 #PROT g1930.t1 g1930 MSGQLVMPQTAPTARKQMAYGSNYMSNDDLAIMLSNPGYRSKIVIEEKPREGVLVSNFAGVVGLYPTLQRSGSLPYLVTSDRDELKNAIVSHVRQFLDGEDRTVSGKNLSNLLVHFELSAIQPSSARAGVLTSAVDRTIGRIHSHLKMNVTIENASARFKTITVPLDVQLRVWASSREAAKDLRIYEQLSQLVSQKVCPNFPVLYTHFRCDASSDFASKAGITVNGNKMVVAALEPFSLTFAEWITRKSYTTEGGVRTAVNSGVHTQDTWKSVLFQLLMAGLVLIDRQVEIGHITVDDITIQDIHDGHTSETHASRIQRTNGRRLGSVIYAMDDVRFYVPCHGYLLRVDCPAGDSERRPLTNEKLADVFGTVGSNSLMPHTSHSQRARIPDDVIALANSIQTSLRDGELPLECLMKNFAEYLDAKLGSDLTSDEVRHVRGNPAFNEQSRVKPGTVVAYMSEPGIYKWMVVSDRTRTLHTLAYKQGGMVKFQRNVTVDQILLTENYAPIEISGGGTIFDLCTFRRAPRVR* # ORIGINAL: g1940.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 43421 44260 . + . ID=g1940;Name=g1940.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 43421 44260 . + . ID=g1940.t1;Parent=g1940;Name=g1940.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 43421 44260 . + . ID=g1940.t1.exon1;Parent=g1940.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 43421 44260 . + 0 ID=cds.g1940.t1;Parent=g1940.t1 #PROT g1940.t1 g1940 MQTANKCIIYARVSTTEQGNTSLDAQVDSCRHYAQQHGYSVINVVRECSSAFRGTQRELRTAIDEMREGTTILVTNADRFSRNTNRGAELLNHICSKGCAVVSILDNVNTNSTMGRFHLLHGIVDGERQSSNIGDKIRLANNARARLGHHIGPVPYGWEVHANNRGIRKLVQNTNEMKVVRLVQKLRKGNLSATKVTSALRTVDPRAEPVEFVHEDTEEPMGNMVANYPYWKIASLLNLYNIQHRNSRWTMHKVATVCKGGRAQKSDLSLLARRLNITD* # ORIGINAL: g1934.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 31416 31895 . - . ID=g1934;Name=g1934.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 31416 31895 . - . ID=g1934.t1;Parent=g1934;Name=g1934.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 31416 31895 . - . ID=g1934.t1.exon1;Parent=g1934.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 31416 31895 . - 0 ID=cds.g1934.t1;Parent=g1934.t1 #PROT g1934.t1 g1934 MNDLRVGDEVYQGDGSTDQVYTFLHRDVSAERIGLLITAGSDALEITFDHLVELVNAESNFVTAGSLKVGDKIRLHGQPTEIASIDEVLINGIYAPATYSGTIVVNGITASNYAGKLAESIGQTTVHRSFAPLRMYGLHDIEDGTIHPYAEALQLANVF* # ORIGINAL: g1946.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 56452 57321 . - . ID=g1946;Name=g1946.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 56452 57321 . - . ID=g1946.t1;Parent=g1946;Name=g1946.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 56452 57321 . - . ID=g1946.t1.exon1;Parent=g1946.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 56452 57321 . - 0 ID=cds.g1946.t1;Parent=g1946.t1 #PROT g1946.t1 g1946 MLLGLNFSSGGVKTLAFIGCLRVLEEQKALDSVKVVCGTSGGAIIGLLFSLGYTSADMEKISAEQLRLLHSEKKSFLSILTNCGISSGEAMESNLRSFIKAKLGSENATFQDLLKQRGITFVATAVRVHQNWTPCDLVNFSPTTTPDMPLWQAVRASSSIPLFFVPTKYKSHYYVDGAVLSSFSEETIEEYLPGGDHQGFFILSAPHTSKLNEDNCTGDPPAFEDYLMSLVLGVMKSCDRAAIAVNPKKTVVLEIDEVSPIQFDITADEITKLISLGNKAMIAFLKKRS* # ORIGINAL: g1939.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 42074 43096 . + . ID=g1939;Name=g1939.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 42074 43096 . + . ID=g1939.t1;Parent=g1939;Name=g1939.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 42074 43096 . + . ID=g1939.t1.exon1;Parent=g1939.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 42074 43096 . + 0 ID=cds.g1939.t1;Parent=g1939.t1 #PROT g1939.t1 g1939 MEQLNDIDLLLQGMLGPDFDQTVSELDTDSLAALIADIYKDGNELSAESIPLPSTYDMSTPGVTTMRTPEIDDVPQLYNWIPDEAMTMRTPEVDADLDDETEAMTMRTPEVDADLDDETEEMTMRTPEAADAPQSRTIVTVGAFSFGPGDAVMIKVYTDEPNELNSEQPALVSDVKTDRKTGDKLIVVEWLYGRNESVIEYPQPLVKSNECFSNQELFRSNHVQTVHVNTINGPCRVQSIQGFLRSKPFNRQFFTRTSIRTRRENSAVICRIGKISCIGCRKIVNPDKASDENAMVLCTKCNRLSHLTCIQRRQTLRPAPTFKSKCSSFCCDSEKYHLNL* # ORIGINAL: g1942.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 49811 51681 . + . ID=g1942;Name=g1942.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 49811 51681 . + . ID=g1942.t1;Parent=g1942;Name=g1942.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 49811 51511 . + . ID=g1942.t1.exon1;Parent=g1942.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 49811 51511 . + 0 ID=cds.g1942.t1;Parent=g1942.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 51658 51681 . + . ID=g1942.t1.exon2;Parent=g1942.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 51658 51681 . + 0 ID=cds.g1942.t1;Parent=g1942.t1 #PROT g1942.t1 g1942 MGWMKALLVLMLTIASSRADVPAFSKMQIVFTDHVAGMTYNGLYDLVFFDDAEQVVPVTIASSSSEYSIPPYATAYLAGMATDGDPTTRWSTDTRTTTQNVTLTVTFASAKRIASIAMYPFYSQVNSFTVLGCNPTCSIFIYSTQLQPAESNTYSFHRLYESTTSLSYGSFRYVVFDFLNSWLAPQGDYNGMYELSVYNRSGIKVPITTAFANSTYSLSYKAALATDNNPATRWSSSLRQNGAPISFFVVLTARNVLSSVALTQYTGQAKDVRIRASSNGRNFTVVTTATLTSQAYGSEQPISITLPVQTVPFKIRNTQTGVEAVYDMDVSTTLSALVLKNIVTFFPSQMLIPVCQEIRVDGAILPMVLTSPLFSSAAPLISATSTTTVRDSCLTITAVAANGAKTFINQPTSKTAFDLRNDINTQLSGGVVVYNGTTLGISPTRTLANYSVVNASTLTVYPASAVTNIRVQYNGVQLVMPITNLEFFTVENLRELTSVKFSTSVDSVNLYGPDQQLLTNPWQSMRSLGATNGTQLYNNVPANLYIAYTSNIGNTGEFNLQMPINYQRHTYSRN* # ORIGINAL: g1928.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 17073 18770 . - . ID=g1928;Name=g1928.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 17073 18770 . - . ID=g1928.t1;Parent=g1928;Name=g1928.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 17073 18770 . - . ID=g1928.t1.exon1;Parent=g1928.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 17073 18770 . - 0 ID=cds.g1928.t1;Parent=g1928.t1 #PROT g1928.t1 g1928 MTFHQHHLTAFNGWLKDPSKRLLWIKGPGGCGKCLGIDERVLVERPAGKNSQDLAYPHITSVRVCDVQIGDVLAHPSGRGNIVRSLATGYGPLYRVVQATNSYIVNEDHILTLFDPALNHLVDVELKEVLASIGGRLGVRYVNGNEVLEPIAIERVADGWYFGFELSTPPDQSANQTPSANKNPSANKNPSASKNPSASKNPSASKNPSRGDGTPRFLLESGILTHNSSFIASALEPHILAATVDVKPLDMPENVTTKIADEFIEEVFGRDNVISMLTMRKCRPVWIAENLELLTKRCVVGSLVEKVRKFKVHDKIVLVSTDGILDDALAKAPSAILTTLTLTCPTADEVLRHLSLSIHSDVHRNLTTDTDFRDLCASGQLYHVFNYVKNGPAFAATSDILAPADAMKNPEMLAAEKLLNRFTTVANMEKWAAGNRKVFYQIHENGLGRMITVQRATQLADLSSIAEILEQRIISQEDDTDRDFFSDIFAEYTCLMASIVHEDNGIAKPIVYSKFLHKMSLKSTSSKNKEQLKPPLNLLSTEELLWLNHIKPLPELAKIDKTKQL* # ORIGINAL: g1944.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 54229 54876 . - . ID=g1944;Name=g1944.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 54229 54876 . - . ID=g1944.t1;Parent=g1944;Name=g1944.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 54229 54876 . - . ID=g1944.t1.exon1;Parent=g1944.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 54229 54876 . - 0 ID=cds.g1944.t1;Parent=g1944.t1 #PROT g1944.t1 g1944 MTANNHIIRTKNILRELKNSEEREVFERKMKKLFKSKSKRRFFHKGGDFVQGGGGVAMIENATAFSGMSMMQPAYAVDYQVGGDVSAAEIDKAVEELLMPFTHAVDECERHIIEARGLQLSGNTKEKIRKVYKRIKSLYRRICKEAATGNQAGGSTQAGSGPAMFGGYADFYQEQSGGAVGKPKHSTAYLTNEILKSAQFMNNIIATMNAMATAK* # ORIGINAL: g1935.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 32246 35605 . - . ID=g1935;Name=g1935.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 32246 35605 . - . ID=g1935.t1;Parent=g1935;Name=g1935.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 32246 35605 . - . ID=g1935.t1.exon1;Parent=g1935.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 32246 35605 . - 0 ID=cds.g1935.t1;Parent=g1935.t1 #PROT g1935.t1 g1935 MFSIVCFLSVTVLAVVVLADYNGTTSTTIGGRTCKRWSFADHNYCRNVEPTMDAPWCYTLDVQFPREKCDVGSDPSFQVSTSITGRPCINHTYCTKTQPTCLTFQAGEITDNEITEPCDVGDGTPLATGFVLKQQFQTHGAYRACSFVVDGTSTLVVSNLRNATGRLKENPRTGEIAWDSENYNSAASVWRWNLTAQVFQFQQFIPTNKSYSTAFITMGVVPYLFVPAIDTTHVYSSVPGGEFTRVASIPVEGATHLIAFFSSESLFLSFSGKVSPIFRYEPFGGGFVQFQSVAPLSTRSAHARWHNSDWLVVTTATGTTLYAFQTTFVATQTFSTAGSDVTFFNTDTIQFLALVDQFAGAVLIHSRRANETVFSLSPIVLNTGGSPESITAEVMWNKLFVVVANRLSATTDRFAAVTRLYVWQEQLNRFAKIQSIPNPTGTYAAFISAGHNRLLWMSSHADGITTNTFSTTWELTAPIVVSVDGPQNVLEGRRIELVVNSSASSSPPSYSVVSAVETGYTISFGKALGIASHLFYVDVADDAIATSPWTLVIEWGQFKEHVHVVQVEDDDIAGLILRPDGKSVMTVALKTLPLGVVRLSATSATVSVFPASVDISPEAYATPITFVAGGSGTVVITTRSDVDGDIYNGLSVEWTVAADKTSHLLVLIVPSTVIPVGLLVAVIVGLKYFKRKPLSIDSNNWLVDMAEIEFMQLIGEGSFGKVHAGLYRNSTVAIKTLSWASTIIPTLEPTGTRSDELREEMKRAMNRPSTEGKKNGLQQVWNTIKRGSSFVVARASIDSKSRQSTKEHDNAIDRFVTEIKMMCRLRHPNIVCFMGACFDENIICMVMEYMNHGSLYHLLKAYSQTDSQPLKWLRRIRMAKDASAGMLYLHSLNPPIVHNDLKSLNLLVDDHFIVKVCDFGLSKIKPTNEDVYVRGEEVVGTMLWMPPEVILGNQFSTVAVDVYSFGIIMWELAALQSPFCALVAEKGVVATTLQVAENNIRPEIPSDTPPDFQTLMTQCWDRSAEARPTFKTVHKMLCDLFIQQHRRHSLRNYQHSSRNSLYWLSTLTTRSHRVHPSEVQINMDSASMRASIRVPQRMEFSSRISELSRRSTLPNGGKK* # ORIGINAL: g1926.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 10880 11632 . - . ID=g1926;Name=g1926.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 10880 11632 . - . ID=g1926.t1;Parent=g1926;Name=g1926.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 10880 11632 . - . ID=g1926.t1.exon1;Parent=g1926.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 10880 11632 . - 0 ID=cds.g1926.t1;Parent=g1926.t1 #PROT g1926.t1 g1926 MVPPSYEGFKSLYDDTVLKKTRRMERDATMSPLDLKQFQESLEGIPNWSNPLLRQECNRIKEKCQWLEKLIQASILSYAQLFCKTQEHQAEMRTAILTDFSCETFVHDYYLMAARELFKNPYLFDSRLSAVDQQRNMRDCFKLLKAALKQTIRQYVPMQDIVTRYMMTPVDTDVRCDMTADRKQAVKDLTDKYIAPIVDDLMTATEQHFLDVYGDTINPMWVQTSTVQPTPTRGQRLQAVTQNPPNMHFS* # ORIGINAL: g1953.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 69874 71172 . - . ID=g1953;Name=g1953.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 69874 71172 . - . ID=g1953.t1;Parent=g1953;Name=g1953.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 70620 71172 . - . ID=g1953.t1.exon1;Parent=g1953.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 70620 71172 . - 0 ID=cds.g1953.t1;Parent=g1953.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 69874 70157 . - . ID=g1953.t1.exon2;Parent=g1953.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 69874 70157 . - 2 ID=cds.g1953.t1;Parent=g1953.t1 #PROT g1953.t1 g1953 MSSLGPVHTLNLSNTSVTDVSALGGVHTLDLNYCKNIKDVSALGGVHTLKLGYTSVTDVSALGGVHTLNLVYANVADVSALGSVHMLDLHNCINVSDVSALAGVHTLRLSNINVTDVSALGKAHTLDLSSCRNVINVSALAGVHALILFYTNVADVSALGRAHTLNLSQCNVSALGGVHTLDLTDVSALGGVHSLELILCNNVTDVSALGSVHTLNLSFTSVTDVSALGSVHKLGLRSCINVTDVSALGSVHTLDLRSCSNLKDMSALGSVHTLTIMN* # ORIGINAL: g1947.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 58011 58838 . + . ID=g1947;Name=g1947.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 58011 58838 . + . ID=g1947.t1;Parent=g1947;Name=g1947.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 58011 58838 . + . ID=g1947.t1.exon1;Parent=g1947.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 58011 58838 . + 0 ID=cds.g1947.t1;Parent=g1947.t1 #PROT g1947.t1 g1947 MLGFRRLDQFAQTPPHIYDLLNGEFKFDFDPCPANPAFNGLDVRWGKSNYVNPPYEDIRPWLEKAVQELERGNTSVFLIPFRPWRKYFFELIFPHASEFRFFRKKFGFVGYDEVAPFAVYLIVFSPSTHKKTSRFTVFDFKKAAGGQTIQHLLNHYKQSYEFDFAKTDGKPDLYKKRWGKVNFIASTVQTPQLIERAAELANEGVVTVLIVCMRAERSYFLSSIMFGKARRVIALYPCVIYKGYTEASPTGSVLLIFGPGSPARLVGPKLSVIEN* # ORIGINAL: g1921.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 2584 3315 . + . ID=g1921;Name=g1921.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 2584 3315 . + . ID=g1921.t1;Parent=g1921;Name=g1921.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 2584 2821 . + . ID=g1921.t1.exon1;Parent=g1921.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 2584 2821 . + 0 ID=cds.g1921.t1;Parent=g1921.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 2903 3315 . + . ID=g1921.t1.exon2;Parent=g1921.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 2903 3315 . + 2 ID=cds.g1921.t1;Parent=g1921.t1 #PROT g1921.t1 g1921 MARLENDIEIQRMLDVQRHGPLITLFVGVKNENALRYLQTRTCVKDYSMKQNEWDYWSITYIEDLIAWKKTQKKPVRVKAVHLMCHGEVDGTLTIPSRTTGKATTLRKDAELIIEGLVNRDPSTQFVDIAFIHCYAHVGESRTINEQLVDRQLKIHRSSGTSKKVPATFNVPGSVRGFDSREVFYHTGLQPELLNDPAVIKWLREQDGLQNAGVLN* # ORIGINAL: g1924.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 8945 9208 . - . ID=g1924;Name=g1924.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 8945 9208 . - . ID=g1924.t1;Parent=g1924;Name=g1924.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 8945 9208 . - . ID=g1924.t1.exon1;Parent=g1924.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 8945 9208 . - 0 ID=cds.g1924.t1;Parent=g1924.t1 #PROT g1924.t1 g1924 MAQFVQQQAPQGMYGDGKPEISLTEKIFNKELIKESIIGAVLMGLLLVAYFHFQKKLDGLNMLDSIYMPALVWGVHTFVRYTLARFL* # ORIGINAL: g1931.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 23451 25904 . - . ID=g1931;Name=g1931.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 23451 25904 . - . ID=g1931.t1;Parent=g1931;Name=g1931.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 23451 25904 . - . ID=g1931.t1.exon1;Parent=g1931.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 23451 25904 . - 0 ID=cds.g1931.t1;Parent=g1931.t1 #PROT g1931.t1 g1931 MLNINADVLRRQIANRIEKRFPGLAARGGSQAQRGGNAYEVTCPINVADNDAYGLLKKLLEGDKLRCVAIGNRKIILHGRKTDPKNPKTAYEYMVRIAAMEKGKPDGNGGWSFGSYDDEKHPENVSLKFYELFREKLSKLSVSTPASAEQTEQRYIYAAMRIHKKTLGCITKHLQSKGGETDPITKLVQDSEDPNKTPCFDYFRVTFSEMTRPQHLKYEVAYLSKFFRDNTLPSVANTSLSVAVWRQILGQLFVFLAQVQCPFPSFRHNRFDIQHCEIMYCMAATPTTGRTVQKTIGSYKFNLPSPDKVQVLVGDLIYAVIPGQLENYAVDQKPDKPNPYFDVYYLLRSLVGFNKYSPFGIVGAKLMNDENSVIPKEVRDFIRRNLPQNTDYSFTSDVPKNLFLPDENYQYKSALQILLTDPFFTEYKSANLPPVDELTEYPACAPNISAGATAEPAVPTASPKAAQVTQPTPSVPEVKPQTNPAASPISISLSDLTPLIGGGDSEQPPVQKPERVDQQVVQPVDQPVATTDSIELSALAAIVDEQPREPFPAANPQTGHGGGNVFANALGAPSMPDANLTSMADASGNMFSAALGNAGVQQFQPTFDGQHFSIPIGGQPRLQQVQSGQFGMPLGQFGAQSALGATPPFGAPTAAYGAPTAAYGAPSAAYGAPSAAFGSQSAAFGAPSAAFGSQSAAFGAPSAAFGAPSAAFGAPSAAFGAPSAAFGAPSAAFGAPSAAFGAPSAAFGAQSAAFGAPSAAFDGQLPFGGMQPPQFGLPPISFGSQFGGQFGGDERKKKTSHSLRVKSTTRSRKEVQL* # ORIGINAL: g1938.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 40688 41785 . - . ID=g1938;Name=g1938.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 40688 41785 . - . ID=g1938.t1;Parent=g1938;Name=g1938.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 40688 41785 . - . ID=g1938.t1.exon1;Parent=g1938.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 40688 41785 . - 0 ID=cds.g1938.t1;Parent=g1938.t1 #PROT g1938.t1 g1938 MGRKYIVRLDSYMWTRAASLTRPTNPVASGAEGQSGGDLAAVRLPDATPTNDTRVPTDDRRSFTIQSQHDANRTQLKETIFGLSSLPHNPMLAQCTNKANGNSCFNAVQTQRFAEALEKTGDNYSQIIRLLMTGKITAENASAELFPNCNNNMTCVLKKIGTKDEQLTHAIVAQGPANTNEWFITYQITDALKRLQFISNEFYSVGTFPANFFHLWGKDINGHERFFTEHSLSSLPSHVRHIGFVFNTAASYEPGKHWVALAVLKLDNKVQVIYFDSGSSQPSSDVLALMDMYCDEAKSLGWTSQKIINAKRHQYGKTECGMYSVFFHALLHTCNSFEEFDQLTYSDEMMFSMRHIFFTDPTLPY* # ORIGINAL: g1949.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 61888 63567 . + . ID=g1949;Name=g1949.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 61888 63567 . + . ID=g1949.t1;Parent=g1949;Name=g1949.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 61888 63567 . + . ID=g1949.t1.exon1;Parent=g1949.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 61888 63567 . + 0 ID=cds.g1949.t1;Parent=g1949.t1 #PROT g1949.t1 g1949 MFCGSGKTLVYHTLIWAEMSGNVLIAFPSLALIEQYCLQYVADERVAAHLAVCSLGSCKVKTTLNPAVVTNFLAQSDPVKVLLVTYQSLETVISAIAADSTSRIELCVFDEAHHVHSAATTKHVAQLMANAACKFLFMTATPREGLDAGHVLKDCPLAYEYDHQRSAQDGICLPFEIRAEVVPSERCRNAAVLQMVLKTVVETGHNRVLTFHSRSNPGSTTASCVVEFAATPIPALPTGCRYKKVTLVGLTGESSDRQSVLSSFDSAADDEIFILASCQILGEGIDLRNANMVVMVDQKLSPISIVQSIGRITRKTAVKSGKPNTVLIPIDIQNEKDLMKLMFNGERLDEMLSGRCAMLRYLKTVKTFVKAIKAESCEAKSVIIKPSGIFSNAEIADWMGSCGYELCERMADPSVVDLIGRQCKLSPDIRAVMGCLTAGCNDWDGAPVESILELLAEELKLKIEVYQRSYEEKMTAYGSVHARVLRLFRDDLQKAWIPIKPTRERWCIEPVKFSKPIVYQNRRSYRMQLVHPMGKRDWDIILLRERASQRPPPSRIRRQ* # ORIGINAL: g1923.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 6797 7105 . - . ID=g1923;Name=g1923.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 6797 7105 . - . ID=g1923.t1;Parent=g1923;Name=g1923.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 6797 7105 . - . ID=g1923.t1.exon1;Parent=g1923.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 6797 7105 . - 0 ID=cds.g1923.t1;Parent=g1923.t1 #PROT g1923.t1 g1923 MTDRPLWSDRNLHRKGRILVVVVLEGHRLEDVASLLASIDIGKYDALGNNCRDYVVQCIKVVSFFGLWVDWEQVLKFISRAQDNNLLTSLKYTTSRPRSSTP* # ORIGINAL: g1929.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 18979 21153 . + . ID=g1929;Name=g1929.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 18979 21153 . + . ID=g1929.t1;Parent=g1929;Name=g1929.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 18979 21153 . + . ID=g1929.t1.exon1;Parent=g1929.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 18979 21153 . + 0 ID=cds.g1929.t1;Parent=g1929.t1 #PROT g1929.t1 g1929 MAEKQVEAASSVEHEITKLMQANSVNIPKESYDALVSKHGKETTDEKIVKEFNRVIAFRINKIAEKLSYAFYKKHGPQSNKVMANEQVYRAIIDRRSEFYFLKVDEPTFDAIMKRIREIYPKLGTQEYVFKDIYTPSTPMANVLGNVIQKPVFNLKTTTNEDADALRKILEEGSNVHHVVANQQIYQQYLMYNDLDIITNGHRTDNDFFNPSLHNPSCYVHPVVAAMFVPKIQSLDDRVLLSDFSRMIRSCHGNTGFVSMSDIQLHYDLTHDPNDAMCFAKSDLESGRLSVFKDLLNRSQVQKFLKESIWNLRAGHFFSGSQCFTNELIARMEGCRASPYDLPHLSMLRDEGMFLKRLLGVFCFRSAIAYNDPVLMHGGLAAIAPRQYPISLVELRPQMPENPQDRPTYNIKKALYTSQRMIDGNRLIESAERILSTNKEVLFFYVNRRLQMRSAFVPPGIPGAMIAQGINVNSAQVMPMPALVPMSEKLNDLYLQFSSDEPTTIKDLCTLDVEGIPYVLKSAVCVRTIAPRSMTRTTPPLSSDEIIVGSFTYLFEYNEGTVAIHKYDPINARENEPVMNRGVDIRQVLAILKKKCTILVYVKDVENNSVRISTTRIAGMTRPEDREASDRDASDREAGSDEESEWDDAPAGARSSRVHLPPGAQLYDSGNMAVPYRTLTEVVDADLFTSGFEMRDGYNLVRLVTSDLDNGAYFYVPKTTLPTR* # ORIGINAL: g1945.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 54996 56162 . - . ID=g1945;Name=g1945.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 54996 56162 . - . ID=g1945.t1;Parent=g1945;Name=g1945.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 54996 56162 . - . ID=g1945.t1.exon1;Parent=g1945.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 54996 56162 . - 0 ID=cds.g1945.t1;Parent=g1945.t1 #PROT g1945.t1 g1945 MRGVDRASRVRRAFVLSAMADTLGHLNGVWLTLPTEDSESLSEEQRRMTDYFLANGGFASFSFDKHNVSDVTLFHLRLCESHLAFLKKSRDVGTFVIRRGGVEKVDSAIDEQLWFDAMDMAAESLVHAYAHEAVGAYGPRLPETSRSAVSIAKLSQGLPWDQLPYTQSLLEPSVITRTMFLGVLYGSSGKLARYAVDFARLTHNNARCYLGAFATALFSALAAEGKVKVFDWPHILLKRMTDVEDVVRESGRGMTEYIMERDEFVYYWRQYIGRRYSGGSLYFSPEDYLQANREKLYAEVFQARTSEPSVEMALIMAFDGLLLTLTCATLTDWHARWQHLVVTMAARPFGRIMGSLTAFWFGIIADVEVDARVEFFDELVLAAGKITQ* # ORIGINAL: g1932.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 27185 28723 . - . ID=g1932;Name=g1932.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 27185 28723 . - . ID=g1932.t1;Parent=g1932;Name=g1932.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 27185 28723 . - . ID=g1932.t1.exon1;Parent=g1932.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 27185 28723 . - 0 ID=cds.g1932.t1;Parent=g1932.t1 #PROT g1932.t1 g1932 MPESAKMPLWPHQLAMLRRCNQIEQSGSAIGIMSDGPGSGKTFALLSLLLQDKERGAGGTNVVVVPINIYTQWNEAISKFTDLNCGQFVQYEEIMKLYYPMLRENLRLYDVLLTTNIHYYTIATTLMSLKLRVRRVIFDEIDNIAWSVESHLPAEVTWFLSASFKPEQTGVYKCSNVEDVTVLCDPEFVKQSILLDPPKVATILVSNLLIDGVLAGVLEGEQMRSVRALDFRKITETKVAQDEKQLVTLLQGEWRSKLECEKLKDKDLRQLIEEDPENPYTEEEHQECRKRIAVLEKKILRMRQLLAHHGLCAFCLEKPTKPYLVTRCCKLKWCKKCLELWMSAHLNCPMCRAENVIKNVVEMIDKPGEKQAIQTNVLKDKKEALLSVIRRLPKDSKTILFSDYDFVFESISQSLAAEGITFADISGGSIKSTDSTLNAFKEGKIRVLLANSKIFGCGMNLEYTTDVILMHKLDEATETQVVGRAQRPGRTCTLRIWHLLYEAERVPPRTAG* # ORIGINAL: g1937.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 39594 40478 . + . ID=g1937;Name=g1937.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 39594 40478 . + . ID=g1937.t1;Parent=g1937;Name=g1937.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 39594 40478 . + . ID=g1937.t1.exon1;Parent=g1937.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 39594 40478 . + 0 ID=cds.g1937.t1;Parent=g1937.t1 #PROT g1937.t1 g1937 MNEYSEQVPDCIPVVSGGTLGGTLRGTLRGILFDKDGTLLDFKGHWGPVLFKVAEELAPSDRVLWRMTEACGFVRGTDKLNERLDVPFASGSGRDVAELWQQILIEEGGVSALPCPVRHSPGSPYWVDAVEGHLLKTASYTFGKPVTDLARLFRQLRADGMKIGIASMDSEKSVRTMISDLNLTVDFYCGADSGIAPKPAADMANAFCQMVGLEPSQVVMVGDSYVDMVMAKNAKLGLAIGVLTGVCGSETLLQHADIIVSSVDSPEFYKALSVPPLATGFSVPQQSGLDWSGV* # ORIGINAL: g1941.t1 original gene structure, not modified by PASA NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS gene 47125 49221 . + . ID=g1941;Name=g1941.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS mRNA 47125 49221 . + . ID=g1941.t1;Parent=g1941;Name=g1941.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 47125 48005 . + . ID=g1941.t1.exon1;Parent=g1941.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 47125 48005 . + 0 ID=cds.g1941.t1;Parent=g1941.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS exon 48171 49221 . + . ID=g1941.t1.exon2;Parent=g1941.t1 NODE_9_length_75811_cov_22.5259_potentialcontaminant AUGUSTUS CDS 48171 49221 . + 1 ID=cds.g1941.t1;Parent=g1941.t1 #PROT g1941.t1 g1941 MARIPANDKIVAMLRELAEIEDNTFKGVAYERAKKTVLAIDFEIVAGDSRIRSLAGIGVKIADKIETLLKTGTLARLQDAKSIIDLKHVFGIGPVAAKKLLARGISSVQQLRIASAADSTLLTAHQKIGLDFVEEFANRIPRQEIQLFERRLNELLQPRGLNLTICGSYRREQADSGDVDVLLTGETVQPLHDIITSLQNAGIITHVLALGDTKSMAVGQVDRSKPHRRIDFRLLTPAEYWFGVLYFTGSDQFNKRMRKIAIDRGFKLNEYSLTPPPPIKIESERDIFDALGMESVEFGQNMTATGKFVVESAVELDFKDVLICPSKSALTSRKDVRLNCELSFKHTSATWTGVPIIAANMDTVGTPEMAISLAQFDCVTALHKFVQPEEVQYLSTLPDRFMVSTGISASDLSQLRKFGAPKMICVDVANGYMEAVEGSISRLRDEFPKSIISCGNVVTGDRTEELIEAGADIIKIGIGSGSVCTTRLKTGIGRPQLSAVLECAIVAREIGGHIISDGGATVAGDLAKAFGAGASFVMLGSMLSGHQECAGELIEENGRQYKLFYGMSSDTAMNKHYGGHAHYRSSEGKTVKVPYKGHVRSTVMDILGGIRSTCTYVGAANIAELYERTKFFRVNAQVNTVFN* # ORIGINAL: g2860.t1 original gene structure, not modified by PASA NODE_6835_length_504_cov_138.098_potentialcontaminant AUGUSTUS gene 1 476 . - . ID=g2860;Name=g2860.t1 NODE_6835_length_504_cov_138.098_potentialcontaminant AUGUSTUS mRNA 1 476 . - . ID=g2860.t1;Parent=g2860;Name=g2860.t1 NODE_6835_length_504_cov_138.098_potentialcontaminant AUGUSTUS exon 1 476 . - . ID=g2860.t1.exon1;Parent=g2860.t1 NODE_6835_length_504_cov_138.098_potentialcontaminant AUGUSTUS CDS 1 476 . - 0 ID=cds.g2860.t1;Parent=g2860.t1 #PROT g2860.t1 g2860 MVITTFEIKANELIVPMDARVYDPVFTLIESTLPPYQKSLLKLKNLRKEYEDYAVLIWAQPRPRMELHAFAWNYEPPREGEADAGVGYCVWGPCLFNVFLTKEGDERKLFRSFVSLEVAKKILKKYTSCMAPDVCDIAVAMDDWDCTGENDPEPSDVA # PASA_UPDATE: g8934.t1, single gene model update, valid-1, status:[pasa:asmbl_7006,status:12], valid-1 NODE_4131_length_2143_cov_35.442 . gene 278 2025 . + . ID=g8934;Name=g8934.t1 NODE_4131_length_2143_cov_35.442 . mRNA 278 2025 . + . ID=g8934.t1;Parent=g8934;Name=g8934.t1 NODE_4131_length_2143_cov_35.442 . exon 278 381 . + . ID=g8934.t1.exon1;Parent=g8934.t1 NODE_4131_length_2143_cov_35.442 . CDS 278 381 . + 0 ID=cds.g8934.t1;Parent=g8934.t1 NODE_4131_length_2143_cov_35.442 . exon 792 986 . + . ID=g8934.t1.exon2;Parent=g8934.t1 NODE_4131_length_2143_cov_35.442 . CDS 792 986 . + 1 ID=cds.g8934.t1;Parent=g8934.t1 NODE_4131_length_2143_cov_35.442 . exon 1199 2025 . + . ID=g8934.t1.exon3;Parent=g8934.t1 NODE_4131_length_2143_cov_35.442 . CDS 1199 2025 . + 1 ID=cds.g8934.t1;Parent=g8934.t1;3_prime_partial=true #PROT g8934.t1 g8934 MLRICSNFKDCASAWCPRTVRASLNGLPYESVYLSYDTPVYVTRIEVYINLGPQAVEGVDVLDARGVWQQLWFLPATSARGSEYLVFQPELCTTTFLTKMLRLRVNTDAVPDQWTEIDAVRMFGTLVPRHSVVLDYDHRLIYIPNPDFSGVDSMFYSASDCPQDVKRRSVQSEVKFVVRNTNDPPVFVTGVSGGGTRGTPVVASPGTPSLVRIQTSDRDGDHVRVIIESLAGMEGTLYAAAASGALNSSSTVLRVGAVVTSIPHTLPASANNSLYVEPVTCGEGVLTFRLDDGNGESNSITGPFTIIITVVCPERATDSTRLAIGLGVGLALGLLAIVAAVALWGAWYKRQMKAASMKWVLRYEELVFEKKIGEG # PASA_UPDATE: g10557.t1, single gene model update, valid-1, status:[pasa:asmbl_8814,status:12], valid-1 NODE_675_length_19197_cov_35.5009 . gene 689 888 . - . ID=g10557;Name=g10557.t1 NODE_675_length_19197_cov_35.5009 . mRNA 689 888 . - . ID=g10557.t1;Parent=g10557;Name=g10557.t1 NODE_675_length_19197_cov_35.5009 . five_prime_UTR 790 888 . - . ID=g10557.t1.utr5p1;Parent=g10557.t1 NODE_675_length_19197_cov_35.5009 . exon 689 888 . - . ID=g10557.t1.exon1;Parent=g10557.t1 NODE_675_length_19197_cov_35.5009 . CDS 689 789 . - 0 ID=cds.g10557.t1;Parent=g10557.t1;3_prime_partial=true #PROT g10557.t1 g10557 MALVNRLLQNPGIRSLVEAAQLWAENSSGFKKY # PASA_UPDATE: g10558.t1, single gene model update, valid-1, status:[pasa:asmbl_8815,status:12], valid-1 NODE_675_length_19197_cov_35.5009 . gene 1498 5222 . - . ID=g10558;Name=g10558.t1 NODE_675_length_19197_cov_35.5009 . mRNA 1498 5222 . - . ID=g10558.t1;Parent=g10558;Name=g10558.t1 NODE_675_length_19197_cov_35.5009 . exon 1498 5222 . - . ID=g10558.t1.exon1;Parent=g10558.t1 NODE_675_length_19197_cov_35.5009 . CDS 1572 5222 . - 0 ID=cds.g10558.t1;Parent=g10558.t1 NODE_675_length_19197_cov_35.5009 . three_prime_UTR 1498 1571 . - . ID=g10558.t1.utr3p1;Parent=g10558.t1 #PROT g10558.t1 g10558 MKHETHPPGYYLYNLPLELEALANHRPEIQKSVGIMLASRRSPALPPQDSSCTQSPEGSAWRGRLAAKTAGSRITRRRVLQWASFLSFVVFAAGAPSTQEAPIKMTDIDSLGRGYNIVDGNPVGDEKTSRDPGWRRPVITLTYDAGLSTSDGRFYVPDQASVHGEVACPYDATVKKATTVSEYQSSLGTYIEIDTGDALGKVSFTANADFKNMASLLNTNSREVYVVRSVCQLYETALNSAAGITVTSDFRAVVADLPMTFDGTSANTFDWFFDKFGTHYSTEMHMGAMISHDYVLNHKDIEDSASSDESLAIGAKISFLNEFVTAKVSTSESTAFQRLSGKGETRVRTVGVMPPTTSKGILGVWYEWKDQLMSPTNFPVPIQYSLAPIADLLDATYFPRDANIAAKRNAVLVALRTYCDRKSDCAIPALSSPLLSAAMLSVVMDAPPVIKMPDIDFLGRGYNVVGGNPAGDEKRSRDPGWRRPVIQFTYEGGLSTADGRFYVPDQASVRGEVACAYDATVEKATTVSEYQSSLHGHVEIGGGGALGPLGKASFSASADFKTMASSLNTNSREVYVVRSECQMYEAALNLITGLNVTSDFRAVVAQKLPATFDGTSASTFDWFFDNFGTHYSTEIHMGAKISYDYVLNRKDIKDSASNEKSLSIGAKISFLNNFAEAKVSLDKKETKTFNDLSEKGETHIRTMGVMPPTSPTGVLGVWQAWKDQLMSPTNFPVPIQYSLGPISDLLDASYFPMDKNIVAKRDAMLAALRTYCDRKADCGLPPSAPSSGVWGTFLGATTYAARLSPFVGSQNGKVVWKTTKHLLSSTKIRFSSPAIGRDGLIYICVQDAISDSSEPHAVIAYEASGLKQKWLRRLAGYRMWTSPVVGPNGNVYVLTCDGLKVLDGWTGEPQWSFEVPNHCEPGSVALSEDGDTVYVGMGQSFYALDPAFGMVRWSLGGELTAEEIAALANPGFLLRNMKASVSRLGYFSASAPSVGPDRTVYAMFAVAPKLWTDRFGTDMSDLKDMSCKTYSRVELRALDGISGTTKWAVPLYDILPYPLFSSGTYSGGAPVVSNGVVYVAYRDPPQLRAFDARTGASLWTSKGTGTATFANSPAVGSDGTVYVGSDDDNIYAVDGATGNLKWKYTTGDNVAAAPAVGADGTVYIGSCDKTMMAFNGTTGAMKWRIQTGDSVTSSAAINSDGTVFVGSEDGYLYAFN* # PASA_UPDATE: g10560.t1, single gene model update, valid-1, status:[pasa:asmbl_8812,status:12], valid-1 NODE_675_length_19197_cov_35.5009 . gene 13279 18916 . + . ID=g10560;Name=g10560.t1 NODE_675_length_19197_cov_35.5009 . mRNA 13279 18916 . + . ID=g10560.t1;Parent=g10560;Name=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 13279 13415 . + . ID=g10560.t1.exon1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 13279 13415 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 13834 13902 . + . ID=g10560.t1.exon2;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 13834 13902 . + 1 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 14385 14451 . + . ID=g10560.t1.exon3;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 14385 14451 . + 1 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 14713 14796 . + . ID=g10560.t1.exon4;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 14713 14796 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 15005 15082 . + . ID=g10560.t1.exon5;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 15005 15082 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 15339 15428 . + . ID=g10560.t1.exon6;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 15339 15428 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 15661 15982 . + . ID=g10560.t1.exon7;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 15661 15982 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 16343 16441 . + . ID=g10560.t1.exon8;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 16343 16441 . + 2 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 16726 18545 . + . ID=g10560.t1.exon9;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 16726 18545 . + 2 ID=cds.g10560.t1;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . exon 18707 18916 . + . ID=g10560.t1.exon10;Parent=g10560.t1 NODE_675_length_19197_cov_35.5009 . CDS 18707 18916 . + 0 ID=cds.g10560.t1;Parent=g10560.t1 #PROT g10560.t1 g10560 MRPDTARTLSPYGDEADYTAMYGLYDPLSRQRHAKQQALVRQHEQLLARRQALLRAELDGRFGTMSRQKNAGVDVYAPMEQLNDGLQSLLQDMRRLQNEVAFKRTGRDHESFASNPSPQAQHFAAVNTLYPYYRKQHMASADNLPQYAPIHQYASMRSLGRPISDLNFEELLAQKEREVEEAHIRERELIALLERERERSRSQSQQHTYGQQQQQQQQQLQQQHQQQLYQTQQSSRPSSRGYSDRPRDPSQAASAVHTHAHTSPAPQRHAPLSGTPSRTHMNDIDSAHASELAMMLSEDRRVREAFGAAKTKSIDDLLSIPPGGRTSRASVRSLNVSSSGPINQMQQSQARTTMDYGRDRSRGHFPRDASMESLVTSVDARDSRDADRQRKQMVEIQNSYERQLSAQQSQRLAIRELMDRQQQQQQQQQQQQQQMRQGFERNDSPEFSSSFHGYPSHDALGRSSAEQRRPTTAPALRTPDRGAGVGSIPRTSSDSRLDMHSHSGGAKSTVGMELEMFARGGESQPRQAHSSGLQHARDGVTVEEPHAHVLPSEFSARKMTPQTSADRTDFRPVSAGGAPLSRNLDAELDEVKIEFSRESVGSSKGFGQGLGLGQGQVQSASASALQQSVNGGGVGSSRRGVQREESLEYGEGFDDDDYDDAISDFNDVVDNNNNNNNNRNSRNNDNNYGNNQEHDEYLGVMNNPDVIALEYGAEGQPRGLDSRRLKSPAVASGGVRPSLHDGDAGPVRMEDIRLLSSVPQHQMLQAGGGMSRSDPTPAVRRSMDAGMAPNALSLQQNALQRQASLSPHTDLSSMRDVVTPTPGAVPSTPQQLLPIGSGTTPFVSGGRPPQAPPTPEPGTPIPPLVRTESVRSGKLGQTPRRVVRSDTRTSMNSLVLSDLDDGEWAFSPGQAHADELTSLHSKTASIASAAGTPMGRPNADFNGEFGLTFAQRLLVAQRIAKSIESGFTPSGDTNRLYKERVPRMQSDGVVR* # PASA_UPDATE: g10559.t1, single gene model update, valid-1, status:[pasa:asmbl_8813,status:12],[pasa:asmbl_8816,status:12], valid-1 NODE_675_length_19197_cov_35.5009 . gene 5543 12541 . - . ID=g10559;Name=g10559.t1 NODE_675_length_19197_cov_35.5009 . mRNA 5543 12541 . - . ID=g10559.t1;Parent=g10559;Name=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 12528 12541 . - . ID=g10559.t1.exon1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 12528 12541 . - 0 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 11214 12100 . - . ID=g10559.t1.exon2;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 11214 12100 . - 1 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 10844 11010 . - . ID=g10559.t1.exon3;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 10844 11010 . - 2 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 10176 10337 . - . ID=g10559.t1.exon4;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 10176 10337 . - 0 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 9510 9785 . - . ID=g10559.t1.exon5;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 9510 9785 . - 0 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 8702 9297 . - . ID=g10559.t1.exon6;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 8702 9297 . - 0 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 7475 8522 . - . ID=g10559.t1.exon7;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 7475 8522 . - 1 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . exon 5543 7095 . - . ID=g10559.t1.exon8;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . CDS 6043 7095 . - 0 ID=cds.g10559.t1;Parent=g10559.t1 NODE_675_length_19197_cov_35.5009 . three_prime_UTR 5543 6042 . - . ID=g10559.t1.utr3p1;Parent=g10559.t1 #PROT g10559.t1 g10559 MTHPCRASLAANSSVSVNNRAGGVGDAHVTVAADERQSVSGSRASIQSAVRASAEVQGSRTRITTDEGTAHPQGVIVDDAHAIATQQQHASTPVRRESAAGVSRASLSVATTQSLGGQLSQSAFTPLSNADTERRISDVSGADTERRISAAIGDQKLGSASEATVGQVSSRSSITASTRPTTADTAIDMRDIVENPAVVEAVASSRSVGSSRSRNVDGKDPMALEVTKSSTSLRRGSDEKNKQVSSSLSPMVSRRTSVANGEKTSPIGSRKSSTGAADASVESPVGSGMGEASLDSAPADDTTRDDAQHAHAASPPPPAVVSFSKEAIEAKSLPTLEELLASIERDVDGGESDAASIGSLSVEEVREQERQMRLERLQLHEENAAIQKRRQQALALAEERAKRKVTEDLKAKTERVVSREILAAQREKNRHDEIRKTFRRAEDQLLHVLQERKAEVTTLYGHLTYADGQYGGVKGRRLKLDWDRTPQPVQIKLGMIRAVKDKISGGRYVLMVSLYDRLGGHVMKWSSLKGQEWGASTLPVEHNGRHFDVELHLDQSVYTVCPARPDIRPGMVVVYELFLLRGIASPVDKVVGWGAFPIADAEFSVIEGKQMCPLMRGDVDLRIDKHSRLEEIVASDIDSWLGNLYFEVVRLPRYFGGQKEYEVELQFTSSLLGFPNRTEGSDEETEEVSESKVTNGAGLNGYGAAALESIANLKRSTVDASALAVGTSQMNSVARHRQVGSMRSFGRTETALSTGAAALGQNRLGFLDETEEDDGNRESNAAGAKSLARMQLSKSHLGQSLGQSMLSRKSENADEDVDSLMWRENAESRLVPEGPGLSFRVHERSPADVSAASAEQWRVREDQKRRRMLARNARARTLTDASQFEDYRFAIRAPFGARNRQNANEKLQYVRRQLLAELGISQWRSREFWAALFLLFAVFWGRLYVHYFGQWLYLQSRKIPVATFKFLAYSTVLLYQGDLLPTSDHIAIFCVGPLFVALIFVLLVGVVYVSQRTVRTFPNLGCRLVLAFGIASILDPILICIVDTAMQRYKNEGEMIGDAFKLYWHFDEEQGSGLVGIFLTVFIYACDMFLGCVLCYVYFLKWHLNGRMLDVYHRLHGEPGDFFVPNDMEISNQELRYICTKAEQWRGEQGERRKVIVNDHIYEEEEAHDREGDARDAPNAPTATTGAQAKASTARQTATKASEDGRKRREKDKLFAQAQPKREVTTHVSIYTLYLDGSKELYRHFLRLPDGAIVEVFGDIDSMGLDGAVKKSLERQKVTLKGMLSQSLQSLERKERGSTSLSARGDGRGSTASGGAIGTETVVVDDTGSHGRGSIGRSSASLRARRSEGRAGGAGVGVGGVSVGGPRDSLAVPKTSISKRSIESLIPSVSSLEESSDDSS* # PASA_UPDATE: g10571.t1, single gene model update, valid-1, status:[pasa:asmbl_9361,status:12], valid-1 NODE_784_length_17720_cov_41.5973 . gene 16921 17705 . + . ID=g10571;Name=g10571.t1 NODE_784_length_17720_cov_41.5973 . mRNA 16921 17705 . + . ID=g10571.t1;Parent=g10571;Name=g10571.t1 NODE_784_length_17720_cov_41.5973 . five_prime_UTR 16921 17002 . + . ID=g10571.t1.utr5p1;Parent=g10571.t1 NODE_784_length_17720_cov_41.5973 . exon 16921 17239 . + . ID=g10571.t1.exon1;Parent=g10571.t1 NODE_784_length_17720_cov_41.5973 . CDS 17003 17239 . + 0 ID=cds.g10571.t1;Parent=g10571.t1 NODE_784_length_17720_cov_41.5973 . exon 17454 17705 . + . ID=g10571.t1.exon2;Parent=g10571.t1 NODE_784_length_17720_cov_41.5973 . CDS 17454 17504 . + 0 ID=cds.g10571.t1;Parent=g10571.t1 NODE_784_length_17720_cov_41.5973 . three_prime_UTR 17505 17705 . + . ID=g10571.t1.utr3p1;Parent=g10571.t1 #PROT g10571.t1 g10571 MADSASPLSPADEPEAHTRLSIVSPAVAPVTISFENLSYTVEIKRSIPITERLTSLNWCCDETPADKKVFLDGITGTAKPGTMTALMGPSGGSAM* # ORIGINAL: g10566.t1 original gene structure, not modified by PASA NODE_784_length_17720_cov_41.5973 AUGUSTUS gene 182 4674 . + . ID=g10566;Name=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS mRNA 182 4674 . + . ID=g10566.t1;Parent=g10566;Name=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 182 285 . + . ID=g10566.t1.exon1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 182 285 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 489 626 . + . ID=g10566.t1.exon2;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 489 626 . + 1 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 815 865 . + . ID=g10566.t1.exon3;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 815 865 . + 1 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 1045 1210 . + . ID=g10566.t1.exon4;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 1045 1210 . + 1 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 1377 1547 . + . ID=g10566.t1.exon5;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 1377 1547 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 1726 1846 . + . ID=g10566.t1.exon6;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 1726 1846 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 1977 2147 . + . ID=g10566.t1.exon7;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 1977 2147 . + 2 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 2247 2410 . + . ID=g10566.t1.exon8;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 2247 2410 . + 2 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 2577 2713 . + . ID=g10566.t1.exon9;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 2577 2713 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 3112 3202 . + . ID=g10566.t1.exon10;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 3112 3202 . + 1 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 3405 4406 . + . ID=g10566.t1.exon11;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 3405 4406 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 4555 4674 . + . ID=g10566.t1.exon12;Parent=g10566.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 4555 4674 . + 0 ID=cds.g10566.t1;Parent=g10566.t1 #PROT g10566.t1 g10566 QSESASQPESPKGDGAALSAPQNDGAGDKTGSFTNAPVASKYLHPTAMQRHVMPKQETPLLTLRSFPPGFLIALGGIVSARSIKLLGKINNPDEPETRDAWWNEVRDEVRSNARALGCHAVVGYSESACICGELFVLSASGTAARIHYGAIGQEGDVGALAAQDNVGTPNGAISAATAVQRRMSVDEQPSAPSAGTPRKRNHPPSRRKRQSPCALCHIPYRRGELPYNMRLIKCAVCRRKYVPEVIFATTELPPQLKVVGQGCLLEARVCRAKRKAQGEANATAVSEAIPFLEYDMHRQLMTKLKIKGMNALFGVRMQVTVGEEMIIGLATATAVYLAALPSPPTIQITRNLDVLDEEDAKLVGIQRRIMELSAQNREQLSLYPVTDAAARDSTEANDSPATDSSSSDSSSDEDDGPNGSDKTAFVVEIDDETDEDTMAVLLDPPIPAGFGVCSTWSLPSDPPAVPVCNLQLVTAVRRVRIEDCSRQMNQQFAGIFHQLQQSLWFKMRALTPCVVSGMWYDVQVPNDDDIQVTVSAMISGLPSPSLAQMAHHFAGSTAGTGTHTGTHTGTHTAAGGSTAVSAPTTPPQRSRALRLFSQSSNVSSQLSVHSHATASIPVTPATPDDEAGMIFPMEAEEMREGSTSTTPLGAGSSHHGTAANALSRTTTSTSVHMTGHRNSISEPLHVRTHVEMTPLPFVAGSVLTRYLGHIDLYLIKESTSVREAGGMGAFVRAFITEAQAIARAHVTALGGNALLAYQLDKVILMETANRNQAYCLLLLNGDVAEVTRTDGAPESLGFEYVSKLGCNLQAQ* # PASA_UPDATE: g10569.t1, single gene model update, valid-1, status:[pasa:asmbl_9363,status:3], valid-1 # PASA_UPDATE: g10569.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9362,status:3], valid-1 NODE_784_length_17720_cov_41.5973 . gene 9795 12566 . - . ID=g10569;Name=g10569.t1 NODE_784_length_17720_cov_41.5973 . mRNA 9795 12566 . - . ID=g10569.t1;Parent=g10569;Name=g10569.t1 NODE_784_length_17720_cov_41.5973 . five_prime_UTR 12438 12566 . - . ID=g10569.t1.utr5p1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 12243 12566 . - . ID=g10569.t1.exon1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 12243 12437 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 12017 12100 . - . ID=g10569.t1.exon2;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 12017 12100 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 11756 11815 . - . ID=g10569.t1.exon3;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 11756 11815 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 11215 11430 . - . ID=g10569.t1.exon4;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 11215 11430 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 10858 11076 . - . ID=g10569.t1.exon5;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 10858 11076 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 10578 10741 . - . ID=g10569.t1.exon6;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 10578 10741 . - 0 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 10350 10418 . - . ID=g10569.t1.exon7;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 10350 10418 . - 1 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 10158 10187 . - . ID=g10569.t1.exon8;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 10158 10187 . - 1 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . exon 9795 9984 . - . ID=g10569.t1.exon9;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . CDS 9903 9984 . - 1 ID=cds.g10569.t1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . three_prime_UTR 9795 9902 . - . ID=g10569.t1.utr3p1;Parent=g10569.t1 NODE_784_length_17720_cov_41.5973 . mRNA 9795 12566 . - . ID=g10569.t1.1.5b6be70c;Parent=g10569;Name=g10569.t1 NODE_784_length_17720_cov_41.5973 . five_prime_UTR 12438 12566 . - . ID=g10569.t1.1.5b6be70c.utr5p1;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 12243 12566 . - . ID=g10569.t1.1.5b6be70c.exon1;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 12243 12437 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 12017 12100 . - . ID=g10569.t1.1.5b6be70c.exon2;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 12017 12100 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 11756 11815 . - . ID=g10569.t1.1.5b6be70c.exon3;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 11756 11815 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 11215 11430 . - . ID=g10569.t1.1.5b6be70c.exon4;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 11215 11430 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 10858 11076 . - . ID=g10569.t1.1.5b6be70c.exon5;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 10858 11076 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 10578 10741 . - . ID=g10569.t1.1.5b6be70c.exon6;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 10578 10741 . - 0 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 10350 10418 . - . ID=g10569.t1.1.5b6be70c.exon7;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 10350 10418 . - 1 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . exon 9795 10187 . - . ID=g10569.t1.1.5b6be70c.exon8;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . CDS 10130 10187 . - 1 ID=cds.g10569.t1.1.5b6be70c;Parent=g10569.t1.1.5b6be70c NODE_784_length_17720_cov_41.5973 . three_prime_UTR 9795 10129 . - . ID=g10569.t1.1.5b6be70c.utr3p1;Parent=g10569.t1.1.5b6be70c #PROT g10569.t1 g10569 MRDFFVLHKSGECVYARNFDGDILDQNLVTGFFSSISTFTQALARQQLREVILENSKFVYRELFDYVLVARCDLEEAKSLVHSQLKDVQSLLELFFGPAENWTSEVLALDGVDDLIDRLFRRCKEEPSAVVLGFDQIYLDHPTRERLDVLLASLEDSEVISGSATMLVLDSAVLHSRMPLIETRMIMHYIKTRPLGNMTLRFAPVHSSGRWFGLYLVQMQPYVLVLLTNLQTMYHELAPSILSFETSLVESNLNLPVEESPLLLRHFATRDTVAFVYHNIRTGVTVAPELRPGPDVEKKLTLRAFWRCFADASPLLAEGGITDFGLTRDGYRFIARLDGIHEMYVLYTDQVRPDAVDAMTSEIQRKVQQRFP* #PROT g10569.t1.1.5b6be70c g10569 MRDFFVLHKSGECVYARNFDGDILDQNLVTGFFSSISTFTQALARQQLREVILENSKFVYRELFDYVLVARCDLEEAKSLVHSQLKDVQSLLELFFGPAENWTSEVLALDGVDDLIDRLFRRCKEEPSAVVLGFDQIYLDHPTRERLDVLLASLEDSEVISGSATMLVLDSAVLHSRMPLIETRMIMHYIKTRPLGNMTLRFAPVHSSGRWFGLYLVQMQPYVLVLLTNLQTMYHELAPSILSFETSLVESNLNLPVEESPLLLRHFATRDTVAFVYHNIRTGVTVAPELRPGPDVEKKLTLRAFWRCFADASPLLAEGGITDFGLTRDGYRFIARLDGIHEMYVLYPSKPTIC* # ORIGINAL: g10570.t1 original gene structure, not modified by PASA NODE_784_length_17720_cov_41.5973 AUGUSTUS gene 13190 15890 . + . ID=g10570;Name=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS mRNA 13190 15890 . + . ID=g10570.t1;Parent=g10570;Name=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 13190 14831 . + . ID=g10570.t1.exon1;Parent=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 13190 14831 . + 0 ID=cds.g10570.t1;Parent=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 15095 15504 . + . ID=g10570.t1.exon2;Parent=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 15095 15504 . + 2 ID=cds.g10570.t1;Parent=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 15837 15890 . + . ID=g10570.t1.exon3;Parent=g10570.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 15837 15890 . + 0 ID=cds.g10570.t1;Parent=g10570.t1 #PROT g10570.t1 g10570 MRPAPPLHSAKGAVTVAISTSSSALFVPASPTKREFGGAISRASDTSEFTDAAFFERPRTLSARTSLSMAIEHDHAVATVLEWFGRMAPHQQTTFVEELLQKCHPRELTLLSSVLRPMAHFYEHLTGYASAARGGGAGGAGGPVHGGADSAWTPATEAEDSQESRARALHMLHQSPPLCRKRGGVLPSIDVHGGSPMRGERSLHHGHHVTTHHTHTSSPSSPMRPGKSSHGRGNLPALGHASPRDARDHGAHHVSFLGGEEEAAVEWLPVETEADMRRFRQRIEDVLEWFGGRSQIQRAKFLSTLIRDCRPRQIRQAFHTVKTLLHRDFVSFLPPALALRILSHLPATDLCKAACASRRWREVSEENDIWRKKCAEVGFMPANEKEFRIAVGDGGRWKTFYIIRYKDKLAKTFRGDFLLLPPKLSLQILSYLDPVSLRGAAVVSRTWNAGVEALRAMRRREKFAREVAENDAWRRRCMESGWVAEPIEDTAAAAKYSWRDRYAFRQRLERNMDAGKYLQGGFEGHSGAVVALQTNGSIVVSASEDGTGLCCIQMREKRLVSGSLDMSIKVWDIDTGTCKQTLRGHKGSVRCLQFTRRRLVTGSSDGDCRVWDMRSGRCKLTIPVESEVLSLHFVSKVLITGSADGILRIFALTDGVCLQTLDDGYPIHALKIDGTYVFCTSDTAFITGGEDCRVDIMNYEI* # ORIGINAL: g10567.t1 original gene structure, not modified by PASA NODE_784_length_17720_cov_41.5973 AUGUSTUS gene 4957 8236 . - . ID=g10567;Name=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS mRNA 4957 8236 . - . ID=g10567.t1;Parent=g10567;Name=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 7879 8236 . - . ID=g10567.t1.exon1;Parent=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 7879 8236 . - 0 ID=cds.g10567.t1;Parent=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 5429 7623 . - . ID=g10567.t1.exon2;Parent=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 5429 7623 . - 2 ID=cds.g10567.t1;Parent=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 4957 5232 . - . ID=g10567.t1.exon3;Parent=g10567.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 4957 5232 . - 0 ID=cds.g10567.t1;Parent=g10567.t1 #PROT g10567.t1 g10567 MAPHPRGASPSRGGASRGGHSRESSGSGMGRGMGMRRGRGGLGGARGGSMRRGGASRLTSTGPRLPAALSTELGEEEGGAQKRTPRVASRAQLRRREKEDKKRRIREYHRRNKVKLEVPVRGGVRSDADGGGARAAIRPRAAPDATGTDGRHSVPVEEKRMAVRPQSQSQSQGALGGLAGKKSKFMDLLRDSNLIPLDDAARERRAADATQDDAEIRRLEKMLGLKGERAQKKKKLPGSFGEEGLDYLLNFEEGDEEGGASGRAGGDGDGDGNGENGDGMDDEDDGMDDEDDGMMVNDDDDDMMEDGDGMVDSDDDGMMDDDDGDDMMEDDDGVEGDTTDDSDVGEMDVDRSGESAESAESDGGTALVVATATARQSSGPKSASSSTGPSAARTAIPKTAHPAAVDAADAADAVDSKGVSGGRYVPPSKRGAATADEAALRAVKGLLNRISAANIERVCGDLQAAYGTHGRARTNDAVARVLLESVADENGMLRRLVAVAAAVVACLHASMGVEIGAFLLQAIARKFTEMYDAGDRSCVNLAVLIAHLLPLGTIHASLVSDYVRLFMRRFTEDDIELINAMLQTAGHAMRADDPAVLRDTIVAIQERAAEAARARSGEAQPPRVRFMLDMIYEIKNNRRSARGTGTQADEVDVLARTVKAVAKKSGSVGDIRMRVSLEDLTAAGTQGQWWLVGAAWAGKSVAAQENDAVSREAGGPPLDKGDQAARLAVLARKYHMNTDVRRAIFNVLMTSDDYADAFERIVRMRLRDAQEREVMRVALECSLHERAFNPFYVHLAAKLCQHSHNHKITFQYALWDRIKTIADASVRHIARLAEFTAHLVRSFSVSLSVLKVINFADLEPKTLVFLRLLFVAVLADGTEDAVRGAFKRIAAVSDLEALREGIVLFLHHYVRGGDTLGRDKTVVKSRMKVAEEALRDTGVFSL* # ORIGINAL: g10568.t1 original gene structure, not modified by PASA NODE_784_length_17720_cov_41.5973 AUGUSTUS gene 8653 9693 . + . ID=g10568;Name=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS mRNA 8653 9693 . + . ID=g10568.t1;Parent=g10568;Name=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 8653 8726 . + . ID=g10568.t1.exon1;Parent=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 8653 8726 . + 0 ID=cds.g10568.t1;Parent=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 8832 8946 . + . ID=g10568.t1.exon2;Parent=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 8832 8946 . + 1 ID=cds.g10568.t1;Parent=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS exon 9088 9693 . + . ID=g10568.t1.exon3;Parent=g10568.t1 NODE_784_length_17720_cov_41.5973 AUGUSTUS CDS 9088 9693 . + 0 ID=cds.g10568.t1;Parent=g10568.t1 #PROT g10568.t1 g10568 MAAMDSHLLAEAAAHAPTQAQVYDSQSVWSRMVTGDLLDELDEEAVALKKMYSRTMEQLHRLQVEEIILDRMCAAGRDSAGHAAGLSERWGVSSVPQLPNVSVGDHESEAEAGVANTASLGDDAEVEVDGASADGLPALNLQLPLAPIVVARPFRHYDNGESDDEESEYGYGDEMGVDDVGATGGADSSMGMDMEVGVGSGSDEGADEDDEATTAELRRILQRELGSAGAWPGDSGAADDENESDGGGGGDYEDMDAHSDEDAG* # PASA_UPDATE: g13875.t1, single gene model update, valid-1, status:[pasa:asmbl_408,status:12], valid-1 NODE_1108_length_13913_cov_38.3433 . gene 108 5509 . + . ID=g13875;Name=g13875.t1 NODE_1108_length_13913_cov_38.3433 . mRNA 108 5509 . + . ID=g13875.t1;Parent=g13875;Name=g13875.t1 NODE_1108_length_13913_cov_38.3433 . five_prime_UTR 108 109 . + . ID=g13875.t1.utr5p1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 108 415 . + . ID=g13875.t1.exon1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 110 415 . + 0 ID=cds.g13875.t1;Parent=g13875.t1;5_prime_partial=true NODE_1108_length_13913_cov_38.3433 . exon 613 1057 . + . ID=g13875.t1.exon2;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 613 1057 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 1374 1450 . + . ID=g13875.t1.exon3;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 1374 1450 . + 2 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 1825 1923 . + . ID=g13875.t1.exon4;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 1825 1923 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 2333 2441 . + . ID=g13875.t1.exon5;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 2333 2441 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 2554 2651 . + . ID=g13875.t1.exon6;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 2554 2651 . + 2 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 2936 3131 . + . ID=g13875.t1.exon7;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 2936 3131 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 3285 3523 . + . ID=g13875.t1.exon8;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 3285 3523 . + 2 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 3906 4002 . + . ID=g13875.t1.exon9;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 3906 4002 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 4147 4517 . + . ID=g13875.t1.exon10;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 4147 4517 . + 2 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 4802 5117 . + . ID=g13875.t1.exon11;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 4802 5117 . + 0 ID=cds.g13875.t1;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . exon 5454 5509 . + . ID=g13875.t1.exon12;Parent=g13875.t1 NODE_1108_length_13913_cov_38.3433 . CDS 5454 5509 . + 2 ID=cds.g13875.t1;Parent=g13875.t1 #PROT g13875.t1 g13875 PSAVAAAAAAATAAVSITPPDSSTPPTTSQSSQPSSVEAKTRASSDAAMCPVALGYRARLEGAEILCDRPFLEGLRTYVDEALCEDSAAVRSGGTPTNLQALASRELETSLSKFSRRLAALRTLMASATDAVAQDDELVTHSLGRSQLSAQLLASTVPARLPSANSSPEEGVAELCDMLQYARDLLLRTQTAVVSAYCEKPCPHAAPGQSAGASGSSSSSSVSSLHKFDAVRVRMSNERARVRIDVDVAQGTVTVIKKSAAYASTRPCFRTYHHSQIITVTKPSKPKCSVALTLAQKPMARVFKFSDMQSRDLFCVLLERTKMLNANTVPVAQYPLSVFIGSWNMGNAEAPADLSSWLNVGAPNSPSKQHDLYIVGTQESYGTMGAWERDWMASVRRHIGNYDLVACESLWQIRIAVLVRPEISHRIWGLQQATVATGIANALGNKGAVAVAFNFDQSRLCFINSHLASGGENCVRRAANYHEIIRGLTPVLCSRRPADLLSQFDHLLWFGDLNYRMDLTVDRVLELIDRRDWNGLRNGDQLLSEQRNGRAFVGFEEGKINFAPTYRFERGTRTTYNWRKGQRVNVPSWCDRVLWRSAAGAGIALLHLGAPNDIVTSDHSPVMALFELDVCARHRTLRPSAVPSSTLSASLNPNALALGAGCASALINHVICISNAIAKIRAPSATPTTRFVLETTSACLSEPQKSRPNRLSAADRKVPSVIDSLAASPTSAVAAVAAVAQMSDPMWTRSDISPMNITVGERNFVEAQHLTLAVYAENQPDQALEKKRALPQPTTAPQDERA* # PASA_UPDATE: g13879.t1, single gene model update, valid-1, status:[pasa:asmbl_407,status:3], valid-1 NODE_1108_length_13913_cov_38.3433 . gene 11750 13638 . - . ID=g13879;Name=g13879.t1 NODE_1108_length_13913_cov_38.3433 . mRNA 11750 13638 . - . ID=g13879.t1;Parent=g13879;Name=g13879.t1 NODE_1108_length_13913_cov_38.3433 . five_prime_UTR 13557 13638 . - . ID=g13879.t1.utr5p1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . exon 13245 13638 . - . ID=g13879.t1.exon1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . CDS 13245 13556 . - 0 ID=cds.g13879.t1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . exon 12914 12945 . - . ID=g13879.t1.exon2;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . CDS 12914 12945 . - 0 ID=cds.g13879.t1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . exon 12499 12719 . - . ID=g13879.t1.exon3;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . CDS 12499 12719 . - 1 ID=cds.g13879.t1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . exon 11750 12305 . - . ID=g13879.t1.exon4;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . CDS 12118 12305 . - 2 ID=cds.g13879.t1;Parent=g13879.t1 NODE_1108_length_13913_cov_38.3433 . three_prime_UTR 11750 12117 . - . ID=g13879.t1.utr3p1;Parent=g13879.t1 #PROT g13879.t1 g13879 MRASAILVAATAAVVALALFVAHADAQACVLSDTRRTRVWNNNGDNVKDDATGMIRMVDNVTMSDGSQAYWFRDILYENNRDMPCVSISNPNVPKVEKRMVQLLLESEAPGLGMCVQLDRPVTNVDNPPFKACGKGRVRACFRGEITFPSTAADKGTVLRVYCDNSCPSSDKIVRFNVIYSDETYDDSSNSLDNWCETNFPQYYSELISKANLNVFGADAQTDDGNFASATVAGTFVTFFFASIATLLML* # ORIGINAL: g13877.t1 original gene structure, not modified by PASA NODE_1108_length_13913_cov_38.3433 AUGUSTUS gene 9527 10248 . + . ID=g13877;Name=g13877.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS mRNA 9527 10248 . + . ID=g13877.t1;Parent=g13877;Name=g13877.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 9527 9839 . + . ID=g13877.t1.exon1;Parent=g13877.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 9527 9839 . + 0 ID=cds.g13877.t1;Parent=g13877.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 9950 10248 . + . ID=g13877.t1.exon2;Parent=g13877.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 9950 10248 . + 2 ID=cds.g13877.t1;Parent=g13877.t1 #PROT g13877.t1 g13877 MGTPTSLAGVAHTEVARPIRRGVRVAQKLSISPAGLNSILTDLLKSDNLATSLWNRRESSLPTRTSTIQWYNTRAIEAKTVIVEHCRTAGTGDNAETPLDPLIVAEEFVAQYPEWSHAAFVSRVAKVRNALGFYQRLANVPIEVVDGVYITLIESQSKALPSPTVSPSAPTSMDVVVRIKCGTPAEIAEAVAEGAKSEEGKPI* # ORIGINAL: g13876.t1 original gene structure, not modified by PASA NODE_1108_length_13913_cov_38.3433 AUGUSTUS gene 5820 7525 . - . ID=g13876;Name=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS mRNA 5820 7525 . - . ID=g13876.t1;Parent=g13876;Name=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 7455 7525 . - . ID=g13876.t1.exon1;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 7455 7525 . - 0 ID=cds.g13876.t1;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 7088 7165 . - . ID=g13876.t1.exon2;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 7088 7165 . - 1 ID=cds.g13876.t1;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 6767 6796 . - . ID=g13876.t1.exon3;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 6767 6796 . - 1 ID=cds.g13876.t1;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 6451 6508 . - . ID=g13876.t1.exon4;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 6451 6508 . - 1 ID=cds.g13876.t1;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 5820 5969 . - . ID=g13876.t1.exon5;Parent=g13876.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 5820 5969 . - 0 ID=cds.g13876.t1;Parent=g13876.t1 #PROT g13876.t1 g13876 MSYGVGPVGTEACVTKIELAVRCSDLLNKDVGSKSDPMCVLFVPGPAGGWVEFGRTEVIWDNLSPAFAKSFMIDYHFEEKQPLRFVVFDVDNERNLSDFAGHDFLGCVELSLVDIIATQGQGFTRRLM* # ORIGINAL: g13878.t1 original gene structure, not modified by PASA NODE_1108_length_13913_cov_38.3433 AUGUSTUS gene 10638 11270 . + . ID=g13878;Name=g13878.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS mRNA 10638 11270 . + . ID=g13878.t1;Parent=g13878;Name=g13878.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS exon 10638 11270 . + . ID=g13878.t1.exon1;Parent=g13878.t1 NODE_1108_length_13913_cov_38.3433 AUGUSTUS CDS 10638 11270 . + 0 ID=cds.g13878.t1;Parent=g13878.t1 #PROT g13878.t1 g13878 MPAPLWQQRCMSLVGGYELPKNYQDIPWGYDIMSGITPLPILEDRTLFLGSYGNVTPFELRHHRINRVVSILGSDSDSVELKFVRRAEAELPEIKFHVETDLPDDGRSGLHLFENVCKFIEEGHAANERIFVHCAMGISRSPSFVTAYLVYKYKVPVWFVVDFLKKHRSISINGGLLYDLLRWEERCLGMRGTLHPPVNIPGFVSLYKLT* # PASA_UPDATE: g8961.t1, single gene model update, valid-1, status:[pasa:asmbl_5016,status:12], valid-1 NODE_2791_length_5115_cov_35.9681 . gene 380 4955 . - . ID=g8961;Name=g8961.t1 NODE_2791_length_5115_cov_35.9681 . mRNA 380 4955 . - . ID=g8961.t1;Parent=g8961;Name=g8961.t1 NODE_2791_length_5115_cov_35.9681 . five_prime_UTR 4936 4955 . - . ID=g8961.t1.utr5p1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 4906 4955 . - . ID=g8961.t1.exon1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 4906 4935 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 4613 4699 . - . ID=g8961.t1.exon2;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 4613 4699 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 4068 4277 . - . ID=g8961.t1.exon3;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 4068 4277 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 3601 3743 . - . ID=g8961.t1.exon4;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 3601 3743 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 2802 3153 . - . ID=g8961.t1.exon5;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 2802 3153 . - 1 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 1664 2596 . - . ID=g8961.t1.exon6;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 1664 2596 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 1221 1267 . - . ID=g8961.t1.exon7;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 1221 1267 . - 0 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 886 934 . - . ID=g8961.t1.exon8;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 886 934 . - 1 ID=cds.g8961.t1;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . exon 380 524 . - . ID=g8961.t1.exon9;Parent=g8961.t1 NODE_2791_length_5115_cov_35.9681 . CDS 380 524 . - 0 ID=cds.g8961.t1;Parent=g8961.t1;3_prime_partial=true #PROT g8961.t1 g8961 MDSLDAHLSTPFSFKVKVEKTKGTMTLDLVRGISIVPVGMQDSLLDVEFRFIRDMKVLTDRFQLTYKLDEAVGSERKIIEVKTESGDSAIVQALVWNMGVVLDGRWTAYTQSLTEYSWFCLTMPRGEAEGRLNRTPPGTFLIRTSESSKYNLSLTVRKSSGFTHCLINNKWSSFVALKRSFDSVPAIVEYYSRNGGVASDEPNLLLRTSNGPLAAASRPASSMSNISGAPPEIAFDALEALMDEEFGTSSRRASVSSVSPSSRRFSNASANSPMASPMPSRSDPLSQSQPTPTSDNHSALRGLHRAASLTVPGAPATPTHNSHTRKLSVGSSDSPTSTPGGFAPSRRAQQVLHQNSARDASSIPENAEEAAMAAAIAASLVTVQHDRNGHERKRSVSHDPSAARSPKPDRPPRPDLIAPASGGNLAAAAAAALLASGTATPPKGYSTAGPMIVAYENIDGEEDEEENGQSFLTQIRREQIRLGPELGQGEFGCVRKALYKVNGVEGEVAVKMIKAKGAGMDEFRNECVLQGSLRHRAIVRAIGLCEMPDELMFVTELMPLGSLKGYLEGNVNSIPPDTLRSYAAQVADAMAYVERKKLVHRDLAARNVLMASHSMVKVSDFGLARETDDDDVYQSARKRKMPLRWMPPEALYFNRFDIKSDVWGF # PASA_UPDATE: g7494.t1, single gene model update, valid-1, status:[pasa:asmbl_5468,status:12], valid-1 NODE_3040_length_4473_cov_39.3447 . gene 2785 4321 . + . ID=g7494;Name=g7494.t1 NODE_3040_length_4473_cov_39.3447 . mRNA 2785 4321 . + . ID=g7494.t1;Parent=g7494;Name=g7494.t1 NODE_3040_length_4473_cov_39.3447 . five_prime_UTR 2785 3211 . + . ID=g7494.t1.utr5p1;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . exon 2785 3447 . + . ID=g7494.t1.exon1;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . CDS 3212 3447 . + 0 ID=cds.g7494.t1;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . exon 3870 3969 . + . ID=g7494.t1.exon2;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . CDS 3870 3969 . + 1 ID=cds.g7494.t1;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . exon 4278 4321 . + . ID=g7494.t1.exon3;Parent=g7494.t1 NODE_3040_length_4473_cov_39.3447 . CDS 4278 4321 . + 0 ID=cds.g7494.t1;Parent=g7494.t1;3_prime_partial=true #PROT g7494.t1 g7494 MPLDHPEVPRDAGSGSGVNNGDGDGIVVVNGESSVAHTNGAAAHVTRPSDDGPLKLRNVVRKEEYVRLLVQALRRMGYDSSARSLEKESGYILEAPAVAKLRSGVMDGDWKLVDSLLPEMNVDEED # ORIGINAL: g7493.t1 original gene structure, not modified by PASA NODE_3040_length_4473_cov_39.3447 AUGUSTUS gene 147 1274 . - . ID=g7493;Name=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS mRNA 147 1274 . - . ID=g7493.t1;Parent=g7493;Name=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS exon 1246 1274 . - . ID=g7493.t1.exon1;Parent=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS CDS 1246 1274 . - 0 ID=cds.g7493.t1;Parent=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS exon 671 767 . - . ID=g7493.t1.exon2;Parent=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS CDS 671 767 . - 1 ID=cds.g7493.t1;Parent=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS exon 147 309 . - . ID=g7493.t1.exon3;Parent=g7493.t1 NODE_3040_length_4473_cov_39.3447 AUGUSTUS CDS 147 309 . - 0 ID=cds.g7493.t1;Parent=g7493.t1 #PROT g7493.t1 g7493 MTLIDETYVRHVLQRFAALLRRQQSLVDGAVAASPSMSKTRKTRPDISSISGEDAIGITSLGPYEVLQSLRTLQKVICNMSQDHLALVVSELVFIG # ORIGINAL: g4879.t1 original gene structure, not modified by PASA NODE_2955_length_4650_cov_36.4763 AUGUSTUS gene 266 340 . + . ID=g4879;Name=g4879.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS mRNA 266 340 . + . ID=g4879.t1;Parent=g4879;Name=g4879.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 266 340 . + . ID=g4879.t1.exon1;Parent=g4879.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 266 340 . + 0 ID=cds.g4879.t1;Parent=g4879.t1 #PROT g4879.t1 g4879 IYEADAGVWLKQLEPRLAAEEDDD* # ORIGINAL: g4880.t1 original gene structure, not modified by PASA NODE_2955_length_4650_cov_36.4763 AUGUSTUS gene 1194 3979 . - . ID=g4880;Name=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS mRNA 1194 3979 . - . ID=g4880.t1;Parent=g4880;Name=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 3892 3979 . - . ID=g4880.t1.exon1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 3892 3979 . - 0 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 3363 3610 . - . ID=g4880.t1.exon2;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 3363 3610 . - 2 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 3049 3234 . - . ID=g4880.t1.exon3;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 3049 3234 . - 0 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 2727 2860 . - . ID=g4880.t1.exon4;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 2727 2860 . - 0 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 2392 2495 . - . ID=g4880.t1.exon5;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 2392 2495 . - 1 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 1900 2060 . - . ID=g4880.t1.exon6;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 1900 2060 . - 2 ID=cds.g4880.t1;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS exon 1194 1667 . - . ID=g4880.t1.exon7;Parent=g4880.t1 NODE_2955_length_4650_cov_36.4763 AUGUSTUS CDS 1194 1667 . - 0 ID=cds.g4880.t1;Parent=g4880.t1 #PROT g4880.t1 g4880 MLVSLQIDARSFEGQHEESALLRSLAKNGDVHYEGQVKTLACENDTQYNALSSAKLRGIPQSTYRTNYVTNPHGGSIAIATVVSSVRVYKDRERCVTFADGVGVLRASVGGEIIYRGEFHEGCRHGYGTADVYAVGVDGRTPTLDGVYTGQWKFNHVSSPMVIVAMGAAHTAERRHGVGRYAHVDGSMYEGEWAYDRKCGYGIEYADGLAHPTSRYIGRWHNDQRKGFGCQVWPSGHVEEREYTGSDAFVRREVNNHSASASLQPHVPQCFQSTATDVTARVHTAVDAVIALISRIESAAGSDDGEAGDIAVARGPVKLAERRLLHTIHTEILPAATQALRTAAPGLNIELCMDDESLTSSANGARAVHVMYDRNSKHILKPVVFAIAEIAKDPDGHDVLSERVVKVVIFNWATEKRRGETESLRVIMEGNELQVWIPMEDEGSAGDPIHINVELLVQTIMKVL* # PASA_UPDATE: g11167.t1, single gene model update, valid-1, status:[pasa:asmbl_7592,status:12], valid-1 NODE_4767_length_1263_cov_36.6827 . gene 157 1056 . - . ID=g11167;Name=g11167.t1 NODE_4767_length_1263_cov_36.6827 . mRNA 157 1056 . - . ID=g11167.t1;Parent=g11167;Name=g11167.t1 NODE_4767_length_1263_cov_36.6827 . five_prime_UTR 964 1056 . - . ID=g11167.t1.utr5p1;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . exon 955 1056 . - . ID=g11167.t1.exon1;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . CDS 955 963 . - 0 ID=cds.g11167.t1;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . exon 631 768 . - . ID=g11167.t1.exon2;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . CDS 631 768 . - 0 ID=cds.g11167.t1;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . exon 157 297 . - . ID=g11167.t1.exon3;Parent=g11167.t1 NODE_4767_length_1263_cov_36.6827 . CDS 157 297 . - 0 ID=cds.g11167.t1;Parent=g11167.t1 #PROT g11167.t1 g11167 MLQCSPTSDGAAAAILANWDFVKEHKLEDQAVEIAGMSMATDVTDTFGKGAIELIGSEMARKAAREAYAQAGIQASDAQVVELHGVYILIINRGK* # ORIGINAL: g1660.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 50636 52102 . - . ID=g1660;Name=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 50636 52102 . - . ID=g1660.t1;Parent=g1660;Name=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 52081 52102 . - . ID=g1660.t1.exon1;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 52081 52102 . - 0 ID=cds.g1660.t1;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 51750 51901 . - . ID=g1660.t1.exon2;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 51750 51901 . - 2 ID=cds.g1660.t1;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 51425 51614 . - . ID=g1660.t1.exon3;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 51425 51614 . - 0 ID=cds.g1660.t1;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 51089 51171 . - . ID=g1660.t1.exon4;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 51089 51171 . - 2 ID=cds.g1660.t1;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 50636 50710 . - . ID=g1660.t1.exon5;Parent=g1660.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 50636 50710 . - 0 ID=cds.g1660.t1;Parent=g1660.t1 #PROT g1660.t1 g1660 MSDTDPQGNDGFRSECTEHEGGGNEADSSSYYMPLGQTVASHADDSEDESGSEWEDAQDQQSGSEPHDQGVSAEDAANVLRDDIDTRAPFIPDLPPRPTDDLDVNIMDRNGNVPNEIQLSDQAVETIKKAMEGFRLPAPAWASSIPEHEWIAQIAERTAPADKTATVPSRVNR* # ORIGINAL: g1652.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 17830 22467 . + . ID=g1652;Name=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 17830 22467 . + . ID=g1652.t1;Parent=g1652;Name=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 17830 17936 . + . ID=g1652.t1.exon1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 17830 17936 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 18123 18321 . + . ID=g1652.t1.exon2;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 18123 18321 . + 1 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 18448 18570 . + . ID=g1652.t1.exon3;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 18448 18570 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 18805 18904 . + . ID=g1652.t1.exon4;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 18805 18904 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 19029 19162 . + . ID=g1652.t1.exon5;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 19029 19162 . + 2 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 19412 19495 . + . ID=g1652.t1.exon6;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 19412 19495 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 19647 19807 . + . ID=g1652.t1.exon7;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 19647 19807 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 19971 20199 . + . ID=g1652.t1.exon8;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 19971 20199 . + 1 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 20368 20471 . + . ID=g1652.t1.exon9;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 20368 20471 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 20593 21198 . + . ID=g1652.t1.exon10;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 20593 21198 . + 1 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 21382 21514 . + . ID=g1652.t1.exon11;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 21382 21514 . + 1 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 21680 21799 . + . ID=g1652.t1.exon12;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 21680 21799 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 21922 22083 . + . ID=g1652.t1.exon13;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 21922 22083 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 22282 22467 . + . ID=g1652.t1.exon14;Parent=g1652.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 22282 22467 . + 0 ID=cds.g1652.t1;Parent=g1652.t1 #PROT g1652.t1 g1652 MSVVGFDFGNDTCYIGVARQGGIEVVTNEYNYRTTPSLVSFGAKHRYIGESANTQTVTNFKNTISNFKLLIGRKFKDADIQAELANVLYKTSELPDGSIGIHVQYLGEEKVLSPTQVTAMLFGQLKTTAERELKTKVVDCVISAPTFFNDAQRRALSDAAQIAGLNSLRIMNDTTAVALNYGIYKQDLPAETEKPRIVVFVDFGQCSFKVAAVSFVKGKLTILSTASDPTLGGRNFDEVLLDHFCTEFKGKYKIDVKSRPKALMRLRAECEKLKKLMGANSTDIPLNIECLMDDIDVKSKMNRTEFETLTQHLFARMEIPLTKVLTDAKLKTDDIFSVEIVGGSSRIPLFKSIISRIYGKEASTTLNADEAVARGCALQCAIISPVFRVREFNVTDITPYAIELFWKSGTGEDSRAEVFSENSQIPSTKMLTFYRGEAFDIHAVYKNAAVVPGGDVNIGTFRISNIRPDRNGQASKVKAKVKVNASGVFAVEAAHMVEDVADITAGAPVPMETDQKEGADVPMPDADAKDGQQPPPLPGQKEAPAAAGDSKKKSVKKTELPIEAQGIATLSKTELNKATEVEVAMALQDKIEKERADAKNAVEEYVYEMRDRLGDRYNEFVTEDVRSQFNTKLDQAESWLYEDGEDETKRAYLEKLGELKKLGDPIVRRFHEAQERPAAEESFRQSVVLLRKAIDQYKNGDEKYAHLDAADVKKVEDTVNSKETWLNDLMFKQNKLAKHDDIVVTAAQITMEKEGMDKVSLPILNKPKPKVEPPKEEPKPAPAPADAPAEAEKPAAAPEADASSANANSANMDLD* # PASA_UPDATE: g1649.t1, single gene model update, valid-1, status:[pasa:asmbl_6428,status:12],[pasa:asmbl_6429,status:12], valid-1 NODE_36_length_55845_cov_42.5867 . gene 11102 13114 . + . ID=g1649;Name=g1649.t1 NODE_36_length_55845_cov_42.5867 . mRNA 11102 13114 . + . ID=g1649.t1;Parent=g1649;Name=g1649.t1 NODE_36_length_55845_cov_42.5867 . five_prime_UTR 11102 11171 . + . ID=g1649.t1.utr5p1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . exon 11102 11174 . + . ID=g1649.t1.exon1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . CDS 11172 11174 . + 0 ID=cds.g1649.t1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . exon 11300 11885 . + . ID=g1649.t1.exon2;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . CDS 11300 11885 . + 0 ID=cds.g1649.t1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . exon 12011 12431 . + . ID=g1649.t1.exon3;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . CDS 12011 12431 . + 2 ID=cds.g1649.t1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . exon 12522 13114 . + . ID=g1649.t1.exon4;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . CDS 12522 12879 . + 1 ID=cds.g1649.t1;Parent=g1649.t1 NODE_36_length_55845_cov_42.5867 . three_prime_UTR 12880 13114 . + . ID=g1649.t1.utr3p1;Parent=g1649.t1 #PROT g1649.t1 g1649 MATNAPNALHCAKCGQATCDAETDICRECENDNQKRLERLSSTNEGATTATTVIAVAGLRPPTNITPPANEVGRPDLIQGQVPSTVGPNSAADAPEDEDDKLIERHRNLHNRFSHVSVSVLYPDFYKKVIKMFDDFIKQFPDVLDDMPKKSQNSVVQTLWAMGENEGLNRLCSAFRALTKAEIRTTGERLLRSIINDSPSKLSRSTSFKRNGGSITPVDRPQAVARTPSCGTPQHTSSTLVRTANITPVDRPQYVARTPCRSTPQHTSSTLSRCSSLTTGTSAKTQSAFVRTVSSGARENPYKKSTPFIERLPTTQSKAKTASTAAAASKSASDIGEVRRVVEFELDTLVVLKQAGHSDQETDDEDSEIDDQPMVITLKKRKRNKVVFVFADDASATPAAKKMRVEPHSGNDNEAECPAAIDDRGGHKRKHADSSAVASEEPAHKRPCNHAAVPR* # PASA_UPDATE: g1650.t1, single gene model update, valid-1, status:[pasa:asmbl_6430,status:3], valid-1 NODE_36_length_55845_cov_42.5867 . gene 13374 14969 . + . ID=g1650;Name=g1650.t1 NODE_36_length_55845_cov_42.5867 . mRNA 13374 14969 . + . ID=g1650.t1;Parent=g1650;Name=g1650.t1 NODE_36_length_55845_cov_42.5867 . five_prime_UTR 13374 13432 . + . ID=g1650.t1.utr5p1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . exon 13374 13759 . + . ID=g1650.t1.exon1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . CDS 13433 13759 . + 0 ID=cds.g1650.t1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . exon 13888 14216 . + . ID=g1650.t1.exon2;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . CDS 13888 14216 . + 0 ID=cds.g1650.t1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . exon 14337 14385 . + . ID=g1650.t1.exon3;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . CDS 14337 14385 . + 1 ID=cds.g1650.t1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . exon 14496 14969 . + . ID=g1650.t1.exon4;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . CDS 14496 14798 . + 0 ID=cds.g1650.t1;Parent=g1650.t1 NODE_36_length_55845_cov_42.5867 . three_prime_UTR 14799 14969 . + . ID=g1650.t1.utr3p1;Parent=g1650.t1 #PROT g1650.t1 g1650 MSSGKKVAVFGAGSFGTALAMVASRAGHTVVIYSRDQQQADAINKDHRNPKFMKEFELPAAISCTTDLVTAVSGASMIIHAIPAQRTPDFLSRHAEHIPKDVVIVSTSKGIYVETQQLMSEAIPDALGRKTNLAYLSGPSFAKEMLLNYPTLVVCAAEDESVAMFVQEMMSSARFRVYTTTDVVGVELGGSLKNPLAICAGIAEGLGFGFNTMAALVTRGCFEMRKLAIAMGGRPETLAGLSGVGDLMLTGFGNLSRNRTVGVRLAKGETLEAIMESIGEAVEGVPTAGVAAKLAEQHGLDLPIFKSIALILEGKLSCADAVDHLMNQALRHEEL* # ORIGINAL: g1653.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 23439 25716 . + . ID=g1653;Name=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 23439 25716 . + . ID=g1653.t1;Parent=g1653;Name=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 23439 24114 . + . ID=g1653.t1.exon1;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 23439 24114 . + 0 ID=cds.g1653.t1;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 24303 24429 . + . ID=g1653.t1.exon2;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 24303 24429 . + 2 ID=cds.g1653.t1;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 24916 25111 . + . ID=g1653.t1.exon3;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 24916 25111 . + 1 ID=cds.g1653.t1;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 25363 25716 . + . ID=g1653.t1.exon4;Parent=g1653.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 25363 25716 . + 0 ID=cds.g1653.t1;Parent=g1653.t1 #PROT g1653.t1 g1653 MGASGKRRSKRLRGVDEDDVDAETWKSPKRRKRGEQREGVATEVPGDGSAGYPMLDADDVDLGGASTQPSSQPLFDSSCDDDGEGAIAPFPDIQEADEHVGHDRSFDDAGMDYSAEEAEEDDDIADVIDSTQESLVGPPAPDEATVGGRDTSDSHTDAQCADGETIIPPNWTEDEKNALFAGISRYGRYNSGAIAAYVGTRTVVEVAVCISAFEKGLADLKRAEKDGHFTPEEKTVLPMCRVANDPVVLGKERARARRKSRAEARKYRLFGIKEEASAGSDSPGRRRRKALVIHPDVYAGLKAHLVSFSRSLVQRSIAYAVERKKNGKGDGKNLVVSPADVHAAIEDAGVPASLDEAFDFPRDERKRRRRRRRASLRSIGSDDASEEREDADSDGGDTRELNMYETCLVDDEASDADFDAQLAAYATLQSDVNADDDDYEEKDTTDGASE* # ORIGINAL: g1655.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 28865 30601 . + . ID=g1655;Name=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 28865 30601 . + . ID=g1655.t1;Parent=g1655;Name=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 28865 28976 . + . ID=g1655.t1.exon1;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 28865 28976 . + 0 ID=cds.g1655.t1;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 29092 29445 . + . ID=g1655.t1.exon2;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 29092 29445 . + 2 ID=cds.g1655.t1;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 29570 29691 . + . ID=g1655.t1.exon3;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 29570 29691 . + 2 ID=cds.g1655.t1;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 29977 30121 . + . ID=g1655.t1.exon4;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 29977 30121 . + 0 ID=cds.g1655.t1;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 30327 30601 . + . ID=g1655.t1.exon5;Parent=g1655.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 30327 30601 . + 2 ID=cds.g1655.t1;Parent=g1655.t1 #PROT g1655.t1 g1655 MYHVAFIAEEIDKFLERRLKKSTSDPSQLFFPKQFSWGSHQQDMAEAWLERLNVCLDNLQRFIDICGDEKSDDDSHNQCEQKAGNDLVMERATTVSASSSTSKTAFVAPRAHIACANCDKADGQIVHIAKPDCDDECSLPLNQRISADVVDMLCVVGEGVVMQLINAAIAAKQKWVEGKAKMAACERQVDAMRTSPIYTQESQSTAQAVLTKWHQWQDVQEKELDRHSARLSIALVEHGILLGGATPQSIASADMPTTTSSHATHGVDWRNTKLMQLRTHVNLHIAGAKERIGLASARHAKATEQIARAISDAAIEKLKALEPPSTAPVFCTDDV* # PASA_UPDATE: g1648.t1, single gene model update, valid-1, status:[pasa:asmbl_6432,status:12], valid-1 NODE_36_length_55845_cov_42.5867 . gene 7942 10597 . - . ID=g1648;Name=g1648.t1 NODE_36_length_55845_cov_42.5867 . mRNA 7942 10597 . - . ID=g1648.t1;Parent=g1648;Name=g1648.t1 NODE_36_length_55845_cov_42.5867 . exon 9287 10597 . - . ID=g1648.t1.exon1;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . CDS 9287 10597 . - 0 ID=cds.g1648.t1;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . exon 8795 9090 . - . ID=g1648.t1.exon2;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . CDS 8795 9090 . - 0 ID=cds.g1648.t1;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . exon 7942 8534 . - . ID=g1648.t1.exon3;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . CDS 8309 8534 . - 1 ID=cds.g1648.t1;Parent=g1648.t1 NODE_36_length_55845_cov_42.5867 . three_prime_UTR 7942 8308 . - . ID=g1648.t1.utr3p1;Parent=g1648.t1 #PROT g1648.t1 g1648 MVLCALSAFVSVACLASLYTVPYSYGDVAGVLQPAVSDSGRSFPPHTERKRPESTGGWRIARNDQSVLRILESLDARRAILYSASDSVIVLRGEMRYWQGYGILFRDRFANTRGNVRFVFQDSAKKQFAPIPNGTIGVLVKCISRLRPRQCLTDDEYSGLHPNVRVSVIAGLSTQVRYGKDMFCNDVNAALQGFVPSSLTAGGPLHDIPDPRRYSFPCFVLPVDRARLVASVEAGTWASDQRWIIKPASLHSGINISLAETTDALLRQTATITAEPSQYNEKSVAQLMLHPPFLLDGLKFDLRVYALVTSISPLRVYVYDGGYARFAAHPYNVDGGRNITQYITNWMVNINFFKNADDITWTFERLKTRMAADGHDVDAAFGRVHSAVARYFLGLEASVRRRPTIEPAQGSWDNTRSYNLFGLDVIFDPDLNPSIIEVNATPEMTTMCEGPNPHFDVHAGTCKTQLRLATDLMRFLYGSGSCGVKKLHSRLMSVGARFESGASNPSYDSMDACREDGEERWRCVDEEDLAIFMQSSCERERCLEAGGWRACGWIPAYPVVDGERYDEWLAHLAHVHGVPVDSRPSRTSWRLHHIQTTLRRAEEEEEHSKS* # PASA_UPDATE: g1661.t1, single gene model update, valid-1, status:[pasa:asmbl_6431,status:12], valid-1 NODE_36_length_55845_cov_42.5867 . gene 52776 55761 . + . ID=g1661;Name=g1661.t1 NODE_36_length_55845_cov_42.5867 . mRNA 52776 55761 . + . ID=g1661.t1;Parent=g1661;Name=g1661.t1 NODE_36_length_55845_cov_42.5867 . five_prime_UTR 52776 52942 . + . ID=g1661.t1.utr5p1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 52776 53351 . + . ID=g1661.t1.exon1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 52943 53351 . + 0 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 53582 53723 . + . ID=g1661.t1.exon2;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 53582 53723 . + 2 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 54013 54044 . + . ID=g1661.t1.exon3;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 54013 54044 . + 1 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 54210 54304 . + . ID=g1661.t1.exon4;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 54210 54304 . + 2 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 54637 54766 . + . ID=g1661.t1.exon5;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 54637 54766 . + 0 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 55155 55291 . + . ID=g1661.t1.exon6;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 55155 55291 . + 2 ID=cds.g1661.t1;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . exon 55619 55761 . + . ID=g1661.t1.exon7;Parent=g1661.t1 NODE_36_length_55845_cov_42.5867 . CDS 55619 55761 . + 0 ID=cds.g1661.t1;Parent=g1661.t1;3_prime_partial=true #PROT g1661.t1 g1661 MAGPAQFSGSLMVKILEASDLQIREIPGGMKLTTIDPYAVIQVDDVGIAETSAKSKTLCPIWNEEHSTNIMHARSLEIFIFHKAAIPPDQFIANVQVNLCDVLAPEGGKNDVWFDLEPAGKIHVSVSFSRTGAKAEEFTAKSDAFQMRRGAIRKRKIHEVNSHKFMARFFRQPTFCSHCGDFIWGLGKQGYQCQVCAVVVHKRCHDKIISVCTHQKKKIEDTPAPDDISARFGFNIPHRFKVNNYKSPTFCDHCGSLLYGIIRQGMRCEACKMNVHKRCKHNVPNLCGIDEKILAEELSKLGTSSASLTAATKKKTPSFHKAEGAPIAVAPAEAIAKPASSKKFGMSDFNFLKVLGKGSFGK # ORIGINAL: g1647.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 256 7411 . - . ID=g1647;Name=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 256 7411 . - . ID=g1647.t1;Parent=g1647;Name=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 7292 7411 . - . ID=g1647.t1.exon1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 7292 7411 . - 0 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 6849 7141 . - . ID=g1647.t1.exon2;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 6849 7141 . - 0 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 1865 6601 . - . ID=g1647.t1.exon3;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 1865 6601 . - 1 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 1648 1712 . - . ID=g1647.t1.exon4;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 1648 1712 . - 1 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 1347 1406 . - . ID=g1647.t1.exon5;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 1347 1406 . - 2 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 865 1094 . - . ID=g1647.t1.exon6;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 865 1094 . - 2 ID=cds.g1647.t1;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 256 442 . - . ID=g1647.t1.exon7;Parent=g1647.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 256 442 . - 0 ID=cds.g1647.t1;Parent=g1647.t1 #PROT g1647.t1 g1647 MGPRLSVESADALLRDSLLGPLATRACFAPEEKGTVVCCLVQESWLKDLLARRQLTAPDPLPLRNFAESDFDLADLRLLVQPSRARVDGPFERIAVKILVKDSASPTGGDAGSHARGGSGVVVVGGLGAQKVAASVRCPKVFPPTDPSQDDESLLAQFILESNLYGPLPASLAFTSYGSARSQFGLTKSWLPPTALGAASASASSTSQTSSLAQATHLTVSASRADALQTVDDPRRALQQQQQTAQHQGYRRQVCLGDFVANLISVVSEGAAVIKAPAGGDRRSVLGGTGASLQASQNDATLSPRHDGGGFGVNKSSIIGIGDVTMPVGASTHPNLVPLTAVVETDKAFFFVTPYIANSLADVLRFSPAMFTGSHAKGLFVLYQLLRVLQFMHANGVTHGALRTGAVLLDENLWVRLSGLGCCSPPLRWPDPPAHLESAVDLAVTLGSEPDIGVRLYGDLSRVLELWLNGTLGNYRYLMLLNRLAGRRVGDPNYHPVLPWVLDFTRLNDGWRELGRTKFRLNKGDQQLDITYDSGTPHHITEVLSEVTYHVYLARRTPRAVLCRYVRAKWEPNEYPSSMQRMYDWTPDECIPEFYTDPTIFESVHDDMPDLEVPRWAVSPRDFVDKHMRALESDHVSEHIHHWVDLTFGYKLTGRSAVKAKNVFLSLVDQHKNPINHGVVQLFQHPHPPRIPSPAHRYASEKAVARRRESESGSLASTGSGLMGTNSSASLRSGNNPESRAMLDTASVREAAVPSSTPVAQQPPTSSPQIQQLHREILQLHKEAPNAGPTPTSQSFFYTPSSNATHGHANAPSEKSQSGGDMYGLGKVFGKARAAISKKITPVAQLSQTSGPTSPSPMDSPLPSGSAFQAIDPSSEQLTPTPGSAFGGGAFGAPTAGMPSAFGQAQGRGSAGSSASTSQMLRKAGANGAAGATSGEIGRTGGDSSLPTPTSVGSSQFFGGSGAAPSTTPSAVTAFAGAGASQQTSGAGIVDRLYHQEHVGSFSAACGGGRLALARERASLGAAEDATASAAAAAAAADSHAVADDFEDVLPRPDVQKDFYRNAALFDGDDARGGVGSTRSEDSAARSKKSSSSETSYEHNSSFEERCAYDMFCFGLVVCEMYLGDRIRSRPLCVPEGDDYPYIQGEMGRICLQHIQDLPGSVREATAALLKLGLSGGRSTESASSGASKGASASASRKWPPSAQTLLAPPCPGRGITFPDYFPQLYEFLSFFQAASWEGRKSLAAEAIPELLEIPEEGFQLLLPFALQLYACPITRPSALDLFVHLASKLGIRRTRTVFMKPLLVLFEAHTDAALQERLLRYDFLANLSLAFGLGAFLEHFLPPIIDAIVNPNIATSTLAAQSLQQLCGDLGPVVSLKYMARPLLRHLAGPRRGLVVQTLASLSARFGGSVVFGLFLPHASTVVSANAGKVTAKNGWLLANLVWLLSATIPHILGHHLPAYIDMCGDKVLRPVLRYIQLASSSFVEGGRWLLCRRVAEFLVRAGPRGDRGVCIDSVVPLLHIFFAGFELIHDSRASRAGSDGPPPSPVTKTVPTVVDASFHSPDGSHVEGTMALADDLVDVYTPEMACFVYQTFCRLIGQETMRRAIPNNGLVEQLMYDHINNPRPQPRMAATTGVQGSGASVSSPSGGAGDAVPSAPKAEPSSPSSAQNSGSGSGGGSGSGSSSAMLPVWEPENMVEFAPGYGCDTAALRARGECCDKYDDVVNTIENYREYFNAQTGNPNRASAFSFRDLRLQTYKAHSASIRALHVYDSENLFLTGSKDRTVRLWSLESVDDGCAPELVCRRTYAGHRKTVFGVQSMVENNRLIISCDGTMHVWESEVGLQFQQFDTGKNPMVAFQYIPSRRMVVAALSDASLRFMDLRNGRFVHDWRVSSVAT # ORIGINAL: g1658.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 46782 48120 . - . ID=g1658;Name=g1658.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 46782 48120 . - . ID=g1658.t1;Parent=g1658;Name=g1658.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 47759 48120 . - . ID=g1658.t1.exon1;Parent=g1658.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 47759 48120 . - 0 ID=cds.g1658.t1;Parent=g1658.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 46782 47469 . - . ID=g1658.t1.exon2;Parent=g1658.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 46782 47469 . - 1 ID=cds.g1658.t1;Parent=g1658.t1 #PROT g1658.t1 g1658 MAGVSPRGRSLRATALALVSISLFARVVFAEGEADWPWTDATGAVVSVETATDDTIAVTVERMSAATVHAQTASLWSVNGVNPTRIGRFTRVWQQRPITTAVELVMRDTYYIVVSERLAQGATYHISGPDNVTATLIFDEKVTHCESIHVNQVGFYENAPARIALFGAFLGDLGAAFLPSEPSFSVYRADDGSHVAGPRKAEYAGLDNARHLSSGEHVYALNMSGMLHTGGPYFLTVHGFGSSHTFGVGRNFTDELSYSTVRALYHQRCGTALDPAHTHFSRCTCHNSVLVTDADPVPGEWFITEDSVGLIWLSVMMACAWTLRTMKMSIDSVMASHLPLRCAIDAIGS* # ORIGINAL: g1651.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 15280 16632 . - . ID=g1651;Name=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 15280 16632 . - . ID=g1651.t1;Parent=g1651;Name=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 16222 16632 . - . ID=g1651.t1.exon1;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 16222 16632 . - 0 ID=cds.g1651.t1;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 16011 16114 . - . ID=g1651.t1.exon2;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 16011 16114 . - 0 ID=cds.g1651.t1;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 15779 15896 . - . ID=g1651.t1.exon3;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 15779 15896 . - 1 ID=cds.g1651.t1;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 15575 15682 . - . ID=g1651.t1.exon4;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 15575 15682 . - 0 ID=cds.g1651.t1;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 15280 15453 . - . ID=g1651.t1.exon5;Parent=g1651.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 15280 15453 . - 0 ID=cds.g1651.t1;Parent=g1651.t1 #PROT g1651.t1 g1651 MADSTIQDIRALAKSTPSRPSTSALNDPRNTLSSSPASSSTPMRGNASKSLPFTLNSPFYGSSDPRQHIHGMMAPTPGRGPTQSLHKLPAVSSPSDVLSIQYGVPVLSRPASASPGRSTGTYQPHSAVSPRNLSTDLAQAGNSFESASATDQLLAKISAELAVCNSQLASERQQRVHLETLLKENSAAEMQRADKFADDLRAATTLAQTLKGDIVRLQGTVRDLRDQTDVDALRTKIHQLQDQLRNECMITYETYNKLPFLVDQRSKRHSNGWGDLLKSALGYMVAAIVVIAMMLFYAAAAKER* # PASA_UPDATE: g1654.t1, single gene model update, valid-1, status:[pasa:asmbl_6433,status:3], valid-1 NODE_36_length_55845_cov_42.5867 . gene 26110 27751 . - . ID=g1654;Name=g1654.t1 NODE_36_length_55845_cov_42.5867 . mRNA 26110 27751 . - . ID=g1654.t1;Parent=g1654;Name=g1654.t1 NODE_36_length_55845_cov_42.5867 . five_prime_UTR 27593 27751 . - . ID=g1654.t1.utr5p1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . exon 27529 27751 . - . ID=g1654.t1.exon1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . CDS 27529 27592 . - 0 ID=cds.g1654.t1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . exon 26769 27005 . - . ID=g1654.t1.exon2;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . CDS 26769 27005 . - 2 ID=cds.g1654.t1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . exon 26470 26657 . - . ID=g1654.t1.exon3;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . CDS 26470 26657 . - 2 ID=cds.g1654.t1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . exon 26110 26294 . - . ID=g1654.t1.exon4;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . CDS 26247 26294 . - 0 ID=cds.g1654.t1;Parent=g1654.t1 NODE_36_length_55845_cov_42.5867 . three_prime_UTR 26110 26246 . - . ID=g1654.t1.utr3p1;Parent=g1654.t1 #PROT g1654.t1 g1654 MGARASTLRPEEIEEIENLTGFTPNQIKRLYKRFKRLDKDNTGTISMDEFLSIPELAMNPLASRVIAIFDQQQTDNVNFKQFVETLSVFRQDASRESKVKFSFLLYDINNDGFITGPELFEVLKMMVGVNISDEQLQLIVDQTILEADILDHDGKISYAEFENVLSHTDVEGKMRICF* # ORIGINAL: g1657.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 38817 46135 . - . ID=g1657;Name=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 38817 46135 . - . ID=g1657.t1;Parent=g1657;Name=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 45959 46135 . - . ID=g1657.t1.exon1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 45959 46135 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 45218 45767 . - . ID=g1657.t1.exon2;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 45218 45767 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 44766 45007 . - . ID=g1657.t1.exon3;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 44766 45007 . - 2 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 43641 44390 . - . ID=g1657.t1.exon4;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 43641 44390 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 43232 43379 . - . ID=g1657.t1.exon5;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 43232 43379 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 42217 43085 . - . ID=g1657.t1.exon6;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 42217 43085 . - 2 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 41800 42015 . - . ID=g1657.t1.exon7;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 41800 42015 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 41134 41463 . - . ID=g1657.t1.exon8;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 41134 41463 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 40243 40853 . - . ID=g1657.t1.exon9;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 40243 40853 . - 0 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 39835 39989 . - . ID=g1657.t1.exon10;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 39835 39989 . - 1 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 39496 39588 . - . ID=g1657.t1.exon11;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 39496 39588 . - 2 ID=cds.g1657.t1;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 38817 39211 . - . ID=g1657.t1.exon12;Parent=g1657.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 38817 39211 . - 2 ID=cds.g1657.t1;Parent=g1657.t1 #PROT g1657.t1 g1657 MEAYELFSDDVAPYVFDIPESDNNIPDLLDEALWALLQWENLQDDDGGVRGGIEPDRHPVGLDSAPSDTLVYKTYKVTWHATASSAGSFAYASRLVRPFDPTRANALHERAVKAYAWLEAHQDDIQRVASVHMYAALQLYLLTGEAKFHDLFVSCLTEVSEKNQYPQLYSALPLPVMDGAVFSPYFFGYLTTDRQTDSSLKTLLRGWVEREAQVTMDAVRDQANGYAYGPARTVAWGSLTNQGIYSNPLMLMYALTGSAQHFDAMARLADYALGANPLGRSYVTAVGAAPPNDPLHLDIMNQRAAGKGIIPGIVLFGPVAVPDSAGYERNIWELQYPSWTDLPEQRRFADSFSLVTANEFITLNLIPFAIFHTVLAAIDARLSSERSSAASVDIVTATAHPSTSGHSDPDNNSQGLSYHWYDHIPPMLHPLYPASGLDLLACPVRVNLYAQSGLLFDGTALTPWGDFCIDYGTFLSGQDAEAIAGEPRGRKLIRLEPDAYHSPSLRVYCDRRDRSDFSGWKYVELRIRLADLAGAPVTKYSIHFGGYTGATLHANIVDYLVNSDGTYMEDRNMRGITGEWVWAKIPMGAMTTSEYDACTVDYISFDTLYPEQRLYVSDLQMTGEGEGAPPATFIEALTASDRAIVLIYDGRAVGAPPSQDPSEYLIDGVMPSKVGRWTAARGQSVRDCQRVTVRHHIYLVLPDGNKLVTGRSYRIESKTRHGPALISFQFHEGATRCECLKVNQVGYSPLKTDRRFAHLGVWMGDLGTTHFDTLPRFTVVRIADGVVVHSGTAQAPLDDRKLAFGSGEYVYRLDLSNVRDGGLYRIVVAGVGSSFTFGVGAAYSHHLAYVSMRGLYHQRCSTALPRRYTHYPRDMCHAVVEKTDADPLSWFISDRGTPVDTVRGGYHDAGNFVRHYSHLVIPATLLNTYEAYAHIFKDGGLDFQDSGNGIPDILDEAMWGVLLYETLQEDDGGVRSGTESTSHPPPFGQVGAANDTLVYKSYARFWLTTMSCAGTFAHASRLMRPFDPRRADALLDRALRAWKWAEETPYASKRAAVRMYGALQLFVATGEEAFHEIFKEEVDRLTNGDLPYPQWYRPDYWNYATLWEGQVFSPYFYSYILLEHTGLDTNYNISARPDAANARPFAVDPTTLAYARKWLDDKSDEYIRESASHIYPMGSPPNVGWGSLTVQGAYAETMMLVYRLTADPQLLSTVVSIADYPVGMNALGKSFITGLGSDAPVSPLSLESYFHEVAGRGPVPGITVYGPSSSPSLLDYETKVWSPTYPNWPLLPNQRKFAEGYTFVGSNEYSVTSPILQNGVMYLILANLADYNERKNGSTGSAASGAFAPANSFLFEPRSRYAFACSNATCFARAPSSRWKVLTDPAISSIDCSFVATGRIIGRIADGSQYNSNDAGITWTALGDSDAVSLCDNPGTKGSRLFAATGASIFSYANPQDALGYVTGATLHGLPEGSIDGPYHVTADGVFVFDEVLGIVRKVASWNCASSSCNK* # ORIGINAL: g1659.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 49394 50143 . + . ID=g1659;Name=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 49394 50143 . + . ID=g1659.t1;Parent=g1659;Name=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 49394 49648 . + . ID=g1659.t1.exon1;Parent=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 49394 49648 . + 0 ID=cds.g1659.t1;Parent=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 49775 49948 . + . ID=g1659.t1.exon2;Parent=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 49775 49948 . + 0 ID=cds.g1659.t1;Parent=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 50102 50143 . + . ID=g1659.t1.exon3;Parent=g1659.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 50102 50143 . + 0 ID=cds.g1659.t1;Parent=g1659.t1 #PROT g1659.t1 g1659 MSGQCGARAKRRDTTRKLLAMWNGGESESVIENVFSKTFSSRYPFLDAPVTTLDGYRKGIAMWKSVFNPFRLTPSELMDGPNENQITFRWTVSGNFAASFPPHSEIKPHNKFVAMDGICIVTFDELNKVIDEWILFDGDDFLKRLRGDISPCPWSK* # ORIGINAL: g1656.t1 original gene structure, not modified by PASA NODE_36_length_55845_cov_42.5867 AUGUSTUS gene 31662 37883 . + . ID=g1656;Name=g1656.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS mRNA 31662 37883 . + . ID=g1656.t1;Parent=g1656;Name=g1656.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS exon 31662 37883 . + . ID=g1656.t1.exon1;Parent=g1656.t1 NODE_36_length_55845_cov_42.5867 AUGUSTUS CDS 31662 37883 . + 0 ID=cds.g1656.t1;Parent=g1656.t1 #PROT g1656.t1 g1656 MLGRSRLGVTILLVLFGLGNSGEPALAQDASQRVQDWSKPSSLPHLTLFGSGNAHMHDPSESPHVASALQTGYEQTWDSIQRIVGRALTKKDTHEASPHNHVDFNGIDVDTGTSWHPYSSEGKRRLVAGTDVRDGSAANVVSMPGLDGMLRDIADELRVRNQRRSQVDAARAGESATPAKDKSEAISSSLRGRHSPFTSNVHAGTYRRGRRSGDNTHLESVQCVIYVSITGKDSPSCGDVSTPCLSIAGAVNQTFATCAAESSVTVMLVAEPDDQGRPPVFPCVDVAIQSDLHVTAIAGSTPSLNTSSWPILDAALQGRHFLVNLTRASDEFVLTGVRLHNGLSSEPGGSVYVARGGIYLSFVVFENNAGAMGGALAVVRSDDDDIDSLVEISQSLFQNNIGTQLGGAIVLIDSFHDTRISDCNFLNNSATLGGGVSLSTLRYPYVGGKMHAFRVSVTNCLFQMNTAYGAGSGLAIVYGGASMENATVDLSGSTFDTNNAHGGGGAFLFYAQCAGRVSVQLVVSGNTFVGNAAPGGAAMDVALKGIVTNSSVAVTNNIFIGNSVLSDGAHAWAIASVSFPSPGVVTGTSVTVRGNRVNQNVCLGPLVHVWFASPAANCALRLELNIFLNNINYAYPTANLTRSMFGGMLRVDFQDISIQNSVVVSESPFVLNTGLVDATALAVQFGGAVTASSSVQVINCTFQLNTGERSTVLFGAPALRMAIVPISTSSNSASNNAIEVIGCAFDANVNRVTSDGTAVSVLLDASEGANNTLALVDSRVSGNRGLCSSVAFSVLGRTSNNTLRIVGTTIAHNKFASLGGLRSAVCGFGSGFAISMGARPLNDSGQGHVTTRGHSVTVTNCSLVGNANNFHTSGGSSVLLMDIEMSSVAVVSTTFTNNTGAITGNALTLMQVSRPSRSPGFGPRAIRNNTWAVESCTFTGNGNGALHVSVADHCESVPTNVLMKFVDNAFTANSQSINPANFTLNDTVGAFLLSTSSSVNLTVIAERNSFKEELCGAWAFVYAPNTYNPSCPSPVVDRHRLVLRDNVLTGNDFSASLGTTICQSALFFQIANVSVNDAHFLVERNVFDGNVVGIGAQTWSLDASPMNITWTMKRNRYTRNRSDAAAGLAFFQVDTSDIVMTSRNSAVQSTSATRTHVSSFALDSDSDAFTNNEAAFYGGGMYLFGIDRTMPLSQTASAFNPNINIPYRDSIFSLNAIFRNAVFSGNKALQGGAIYAAAGNLTFVNCSFVNNVAVSSGAAIALQFSASIRIVDSVWLNNTARRAAQLYSVGWGGVSIHGGTMQLRGAALDDFEVIDAGDIRLLSGFTIACPRGCSVENATALNYTRSTPDTFPYVFKANTLTFSCNPCPPFTFALGSGRVVGGASGLLDDVAHFPVVCRDCPFGADCSEGGDSIFARPFFWSDAAGARVTLSSAADHNTYNAAVDKVGDGSVTMVRCPEGYCCPASALQCELDFCAHNRAGIMCGSCREGYEEAYGTSGCLRQSECGYVAYWALITCYAVAFAMWLALRFDPQPTGSTTVFFNFVQTAPLLIVTPISQLVQRTLSLFSFQMHAASADSSKGLCVFPGMSSVQKLALQYLLPAYVALLIAIFYIKESLYRRTGVCGARPKRSGSVDSTLRPLLPNGEREGMAYSTDAMMINAETATSEAIGGDVDDALFTDAAVLTRVSTDNEDDDNCNCDACDADRERLESCAPQAGDGFCSGLFFGARGRYGIAAIHLVLLANSAMLKGGLELLHCVSVDGEWRLFRSGDVRCLQPWQIALLVLCVCVILPLPLIIIAVGKYMRRRGGVFAPQPRSHDTGCGCTEKLPSTAIRGDGCVANNTATSVGGALDDESQVLCLLEGPYVADCSYWQSVSIGRRSLLVIITTFVGDPALRASLAAILCCVALVAHMQFRPFHEERVQGRETASLAVLLVLAVLSIRAASNMSGGVTEQGSVSSFSKGFEITQSAIVLLALALFLVVYICQYWDKITSAPSVFRGLCVRCARFAKRKAARVRRKIREFCRRHSICHCLRGDAQSSTCRRRHWQRDDDRTGGGVNAPECDDSVRSADAAL* # PASA_UPDATE: g13620.t1, single gene model update, valid-1, status:[pasa:asmbl_9958,status:12], valid-1 NODE_90_length_41739_cov_41.4537 . gene 39793 41530 . - . ID=g13620;Name=g13620.t1 NODE_90_length_41739_cov_41.4537 . mRNA 39793 41530 . - . ID=g13620.t1;Parent=g13620;Name=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 41464 41530 . - . ID=g13620.t1.exon1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 41464 41530 . - 0 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 41282 41367 . - . ID=g13620.t1.exon2;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 41282 41367 . - 2 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 40818 40955 . - . ID=g13620.t1.exon3;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 40818 40955 . - 0 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 40624 40711 . - . ID=g13620.t1.exon4;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 40624 40711 . - 0 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 40307 40430 . - . ID=g13620.t1.exon5;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 40307 40430 . - 2 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . exon 39793 40110 . - . ID=g13620.t1.exon6;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . CDS 39969 40110 . - 1 ID=cds.g13620.t1;Parent=g13620.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 39793 39968 . - . ID=g13620.t1.utr3p1;Parent=g13620.t1 #PROT g13620.t1 g13620 MVYGICYCPLSQKDKLASLGFADSKTLDEGQRDALFNVIKDANDFIGWAVRVYVDTVGDPAKYQDKLSKIFPDIAVTVTAKADSLFPVVSAASICAKVTRDEVLKNWVFAEADLELSKDYGCGYPSDPATQRWLKEVLDPVFGYPGFVRFSWATCKNLLDKSAIPVRWEDDDEDAENAEAARGTPAINSFFASARTAERHRFFAERKLKRVVDF* # PASA_UPDATE: g13609.t1, single gene model update, valid-1, status:[pasa:asmbl_9963,status:12], valid-1 NODE_90_length_41739_cov_41.4537 . gene 14924 16093 . - . ID=g13609;Name=g13609.t1 NODE_90_length_41739_cov_41.4537 . mRNA 14924 16093 . - . ID=g13609.t1;Parent=g13609;Name=g13609.t1 NODE_90_length_41739_cov_41.4537 . exon 14924 16093 . - . ID=g13609.t1.exon1;Parent=g13609.t1 NODE_90_length_41739_cov_41.4537 . CDS 15134 16093 . - 0 ID=cds.g13609.t1;Parent=g13609.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 14924 15133 . - . ID=g13609.t1.utr3p1;Parent=g13609.t1 #PROT g13609.t1 g13609 MREMLAGPTKASRSASPTHAHCPYSPYSPYSSASASAPAPAHAACEYLRECVRMDGAPACQPQPPPHVDDLICKPDQFEALLPLLDDLEMLDIAVDEWNDVLQWCTTPDARSTITVPTSSAALPASVLGAPPTMPMSPLLLPYSPPTTSYSAYNSQSGASPVSTAACYGAVAGSGTSGVIQNSRVALPSAPVVVFEPRPTGGRKNLTLDQVTEMLEQPIDSMLNGADLGVRRHIHRGILNSVGRKALVRRIRKVLLPKPTQKEKEACRHRVKGVLLPFIFGSDYGNGNLRVGDASGNTDLTIVSDFAQKIGLAVAGYRT* # PASA_UPDATE: g13618.t1, single gene model update, valid-1, status:[pasa:asmbl_9957,status:12], valid-1 NODE_90_length_41739_cov_41.4537 . gene 34134 37159 . - . ID=g13618;Name=g13618.t1 NODE_90_length_41739_cov_41.4537 . mRNA 34134 37159 . - . ID=g13618.t1;Parent=g13618;Name=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 36694 37159 . - . ID=g13618.t1.exon1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 36694 37159 . - 0 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 36519 36587 . - . ID=g13618.t1.exon2;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 36519 36587 . - 2 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 35949 36383 . - . ID=g13618.t1.exon3;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 35949 36383 . - 2 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 35763 35778 . - . ID=g13618.t1.exon4;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 35763 35778 . - 2 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 35521 35590 . - . ID=g13618.t1.exon5;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 35521 35590 . - 1 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 35227 35370 . - . ID=g13618.t1.exon6;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 35227 35370 . - 0 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 34820 35037 . - . ID=g13618.t1.exon7;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 34820 35037 . - 0 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 34513 34712 . - . ID=g13618.t1.exon8;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 34513 34712 . - 1 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . exon 34134 34341 . - . ID=g13618.t1.exon9;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . CDS 34250 34341 . - 2 ID=cds.g13618.t1;Parent=g13618.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 34134 34249 . - . ID=g13618.t1.utr3p1;Parent=g13618.t1 #PROT g13618.t1 g13618 MLSVSRFVGGSLSHPCSVLGRFASCAHSLASATGASQREKGLLVGVYSHAVQPLTAEEPDGTASGEDSKNADKPLILTSASQRIGSIVGNKLVDLLRLAGAKGQPGECRVFYGLFDEFPKVAVVGLGAQNYSYDTPPEPYEDIGRKSENVRIAVGAGVRTLRDLGVTDIEIEDFSDAQSAAEGALMAVHSLDKFKGNAGPKKKPAPTIKLNSAFGSGGSDAQFQRGQILAAAQNLARELMETPSNHMTPRAFADRIVAEMVAGSTLGGATVEVRVREKSWLTEKKMGAFLAIAQGSDEKPVFLELEHRGAPNSKAPPLVLVGKGVTFDTGGISIKPAPSMSMMKGDMGGAATVCSAIRAAAALNLPINIVALVPLCENMPSGKAIKPGDVVTAMNGKTIEIDNTDAEGRLLLADALVHAHSFAPGAIVDVATLTGAMDVALGGVAAGVFCNSTPLWNILKQAGDVAGDPFWRMPLYAAYHRQLKSGVADLMNVGGRSAGACTAAMFLKEFVKCKKWAHIDIAGVMHKTSDSGYLSKGMTGRPTRSLIEFAVQLSSESDWGTKLRARSDV* # PASA_UPDATE: g13606.t1, single gene model update, valid-1, status:[pasa:asmbl_9959,status:3], valid-1 NODE_90_length_41739_cov_41.4537 . gene 6710 7898 . + . ID=g13606;Name=g13606.t1 NODE_90_length_41739_cov_41.4537 . mRNA 6710 7898 . + . ID=g13606.t1;Parent=g13606;Name=g13606.t1 NODE_90_length_41739_cov_41.4537 . five_prime_UTR 6710 6843 . + . ID=g13606.t1.utr5p1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . exon 6710 6903 . + . ID=g13606.t1.exon1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . CDS 6844 6903 . + 0 ID=cds.g13606.t1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . exon 7035 7157 . + . ID=g13606.t1.exon2;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . CDS 7035 7157 . + 0 ID=cds.g13606.t1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . exon 7252 7527 . + . ID=g13606.t1.exon3;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . CDS 7252 7527 . + 0 ID=cds.g13606.t1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . exon 7632 7898 . + . ID=g13606.t1.exon4;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . CDS 7632 7790 . + 0 ID=cds.g13606.t1;Parent=g13606.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 7791 7898 . + . ID=g13606.t1.utr3p1;Parent=g13606.t1 #PROT g13606.t1 g13606 MAEYARRLKTILHHKTPDFGDLDGTISAFINFQDNLDRGRSAIAALDMNQSASKLIKQTHHNLRVMFASILLQVYCNAPRQVWDEIQGPKFFSFVYFHTCDIHYDALSNNWGTDPKCPELLEHFTKTKTIKLLEDEFCHLALIISAQRSRHAEPHWRPTVGDCERVMEAYRLHEDHERLKKFAVPLTVIGGIAIAAFVYLRFGRK* # ORIGINAL: g13617.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 32351 33749 . + . ID=g13617;Name=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 32351 33749 . + . ID=g13617.t1;Parent=g13617;Name=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 32351 32575 . + . ID=g13617.t1.exon1;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 32351 32575 . + 0 ID=cds.g13617.t1;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 32729 32949 . + . ID=g13617.t1.exon2;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 32729 32949 . + 0 ID=cds.g13617.t1;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 33105 33349 . + . ID=g13617.t1.exon3;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 33105 33349 . + 1 ID=cds.g13617.t1;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 33571 33749 . + . ID=g13617.t1.exon4;Parent=g13617.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 33571 33749 . + 2 ID=cds.g13617.t1;Parent=g13617.t1 #PROT g13617.t1 g13617 MSVSVSIPGGDPGDAFVTVNGARIHYTDSAPAAGGAVETIVFSHGLFMDVRIFKYQVAEFTKKGYRCVCYEHRGQGKSNVVGIDAKYDIETLYQDALAFIKSLNVGPVHFVGHSMGTYVAMRLAIRNPDLLRSLTVISGDPDAGTLKLSTRFVCFLVGIFGTGWISGILERALFGPSFIADATRSTDVDMWRTHIAGLGKGAAPVARGIAARDSVRALLPQIKAPSLVIAGTEDKKVGPSVAAEISAGIPNARSVSINNAGHASQFEQCSAVNAAMSDFFKAVQSGVRL* # ORIGINAL: g13613.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 21755 24009 . - . ID=g13613;Name=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 21755 24009 . - . ID=g13613.t1;Parent=g13613;Name=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 23944 24009 . - . ID=g13613.t1.exon1;Parent=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 23944 24009 . - 0 ID=cds.g13613.t1;Parent=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 23618 23773 . - . ID=g13613.t1.exon2;Parent=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 23618 23773 . - 0 ID=cds.g13613.t1;Parent=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 21755 23320 . - . ID=g13613.t1.exon3;Parent=g13613.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 21755 23320 . - 0 ID=cds.g13613.t1;Parent=g13613.t1 #PROT g13613.t1 g13613 MADAYAAGLKENAFKGVCGTEEEFDTPEDVERKVGRLAALIRAASTASGGVVVHTGAGISTSLPAGIPDFRGPNGVWTRQQRGEKIEGGIDFNSALPTFTHMAISAMTHAGIVRHVISQNVDGLHLRSGVPRTRLSELHGNFFAERCLSCNAEYIRECSVDVIGIRPTGRSCERPGCAARDTHNATATDQRAEMEPRAEARTRRSARLASSAKEARDGTNSLHSSVLDWGDALPEDDLRGAEIACRRAGLSLCLGTTLQVDPSGRLPLLTTRKRRAPAKHSAGKKRKGDRGAAVSSADVKVEDGYDGGDGDDDKGDDKGGVQRGHIAIVNLQPTPHDGRADVIVRAYVDGVMHKLVHTLGIELGHFVRTETYRVRATMVPDADNNNNNNNSNNNSNDDDDSTPVSHRAHELCEITVDAPNYVRGNQLQRMRFVATPVVGSAISAEVTGPPPFTARVRLAPPFSLRVSVECSCASEDRAAVAENGSSVQVAVNSVPVRMGATFSTTIDRVPFCRWIDAEVERYAYGWDDVSGKAIASRVECGEQGRVLREYDAEWRQCADKACKRWVRGTSGGIMREGGDGSHAPLCIEHTQESLP* # ORIGINAL: g13611.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 18676 20394 . + . ID=g13611;Name=g13611.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 18676 20394 . + . ID=g13611.t1;Parent=g13611;Name=g13611.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 18676 20394 . + . ID=g13611.t1.exon1;Parent=g13611.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 18676 20394 . + 0 ID=cds.g13611.t1;Parent=g13611.t1 #PROT g13611.t1 g13611 MKSTPQQPQLSTAAATRPPISISTHRGLKAVFRVLFACTTLAATVHIVERASFSIGIYERSFFACEVILIIMTLINLATMLPHVRALMSHAEAERLLRLKGRQLPLVDVVIATHKEPVDIIANTVKAALEIDYPVDRMRVFVINDGHGTDFEPRLRALYDGRYTVYRRDNNEGHKAGNINNFLTKTREDPSDLILILDADMCARKEALKSLVPYFLQNKRLGFVQGAQRFSPCEDAWCLDDEWACWYDVVQPHRDSIGVAVCLGTNFIIPRRVLDAVGGFPKDFVIEDAALALLVHSLGYETRYTGGTIAMGLGPPDGSSMVRQQVRYCEGNAQLVRWLLWDRALPDLHIGKKAAQIFFFCYYLLGPFVVAMMIDPFVRFAFYMPPPPGLCNRTYLPFIALATITELLAYYPHHASLYRRKQMFAVLAWPFTVAWTAFSGRAVEFVPTLSEDSASPLESPSNSPPTHKQLLAAPNKKSSTAYAMRFHILYGIGVGLAAILAQMGFVAMVDTLRVAYAASNMMPVLGVILAGKQSMVARIKGLTYAPLVGVVVIGAFMVATGQPVLVPLLPYY* # ORIGINAL: g13614.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 24715 26586 . - . ID=g13614;Name=g13614.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 24715 26586 . - . ID=g13614.t1;Parent=g13614;Name=g13614.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 24715 26586 . - . ID=g13614.t1.exon1;Parent=g13614.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 24715 26586 . - 0 ID=cds.g13614.t1;Parent=g13614.t1 #PROT g13614.t1 g13614 MLSINRQLIAPKLLYLIINVSLACLTPYLPLYYLHQGLTKTQVGLLGTFTPLLSFLGCPLWTLLADWSHGHKAILLFTLVVSVALRMAVYFLTGFKWLVVIVCANALVGAPVMPLIDAAVIRLLGENKSKYGRQRVFGSIGWGCAALGMGIVVDHYGIKYGFITHAATTVLVVPIIIVMGGFSHLGEHEQSKRSESDRTSDSDECIYGQEVDSMATPTVPAERPSWRAVCKLFADWQMGAFYLSIFLMGMSASVIGNFEFVYLESLGANESLMGLSLAVTCVAELPFFFFSGNMIARFGVRRVLYAVFVCFALRMFLYTLIDKPMLVLPIELLHGVTFGAMWSAGVAYAHEFAPPGLGSTTIGLFNGIYNGLGASCGALVGGLVYDHYGAKVLFRASSVASLVGFILFFVAQYLPRDPALAEKEALLGKVKKGTFVHGASKGQAQPPGGAEPGGVIASGGYQSFSDINIPVFMYGACESDMGTEQSALSSRRGSDLEIGPSGKGWRSNASTPRAVPNKKPDAGDNGDDGSSVFASVGDPSPDPHYNPQGAMSCVQAYPQQSQQKVNRTYGAVCANLLEARESDALIPAAATNCPKNKHKTRRRSVTASTSAGQQHHGSHRVLD* # PASA_UPDATE: g13616.t1, single gene model update, valid-1, status:[pasa:asmbl_9956,status:12], valid-1 NODE_90_length_41739_cov_41.4537 . gene 31203 31984 . - . ID=g13616;Name=g13616.t1 NODE_90_length_41739_cov_41.4537 . mRNA 31203 31984 . - . ID=g13616.t1;Parent=g13616;Name=g13616.t1 NODE_90_length_41739_cov_41.4537 . five_prime_UTR 31910 31984 . - . ID=g13616.t1.utr5p1;Parent=g13616.t1 NODE_90_length_41739_cov_41.4537 . exon 31541 31984 . - . ID=g13616.t1.exon1;Parent=g13616.t1 NODE_90_length_41739_cov_41.4537 . CDS 31541 31909 . - 0 ID=cds.g13616.t1;Parent=g13616.t1 NODE_90_length_41739_cov_41.4537 . exon 31203 31434 . - . ID=g13616.t1.exon2;Parent=g13616.t1 NODE_90_length_41739_cov_41.4537 . CDS 31312 31434 . - 0 ID=cds.g13616.t1;Parent=g13616.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 31203 31311 . - . ID=g13616.t1.utr3p1;Parent=g13616.t1 #PROT g13616.t1 g13616 MLSAKTVSALALAMCALAVVVSVANADTPYLTSLITVTSSKGGRDLVIDTDSAEVKGYSTWAGNLTLSTGADGEKLVRADIYDSDGDAFFAVRLGAGSDDHCVLDANVNLNTDKALLTVFKQNGLSCHVSAHRPDESTNTYRFSVTATATHSEDCDWNGTHCA* # PASA_UPDATE: g13610.t1, single gene model update, valid-1, status:[pasa:asmbl_9960,status:12], valid-1 NODE_90_length_41739_cov_41.4537 . gene 16817 17531 . + . ID=g13610;Name=g13610.t1 NODE_90_length_41739_cov_41.4537 . mRNA 16817 17531 . + . ID=g13610.t1;Parent=g13610;Name=g13610.t1 NODE_90_length_41739_cov_41.4537 . five_prime_UTR 16817 16882 . + . ID=g13610.t1.utr5p1;Parent=g13610.t1 NODE_90_length_41739_cov_41.4537 . exon 16817 17058 . + . ID=g13610.t1.exon1;Parent=g13610.t1 NODE_90_length_41739_cov_41.4537 . CDS 16883 17058 . + 0 ID=cds.g13610.t1;Parent=g13610.t1 NODE_90_length_41739_cov_41.4537 . exon 17244 17531 . + . ID=g13610.t1.exon2;Parent=g13610.t1 NODE_90_length_41739_cov_41.4537 . CDS 17244 17301 . + 1 ID=cds.g13610.t1;Parent=g13610.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 17302 17531 . + . ID=g13610.t1.utr3p1;Parent=g13610.t1 #PROT g13610.t1 g13610 MGTHVPTETPPRGAMAQLVTVECPGCGSNVEVPHDILELREHTKNRIVGMRKGMLECKWCNRRFYGPGMDLCLCSVL* # ORIGINAL: g13605.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 1026 6102 . - . ID=g13605;Name=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 1026 6102 . - . ID=g13605.t1;Parent=g13605;Name=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 6047 6102 . - . ID=g13605.t1.exon1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 6047 6102 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 5880 5955 . - . ID=g13605.t1.exon2;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 5880 5955 . - 1 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 5145 5572 . - . ID=g13605.t1.exon3;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 5145 5572 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 4681 4835 . - . ID=g13605.t1.exon4;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 4681 4835 . - 1 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 4247 4291 . - . ID=g13605.t1.exon5;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 4247 4291 . - 2 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 3987 4057 . - . ID=g13605.t1.exon6;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 3987 4057 . - 2 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 3613 3741 . - . ID=g13605.t1.exon7;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 3613 3741 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 3060 3389 . - . ID=g13605.t1.exon8;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 3060 3389 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 2665 2890 . - . ID=g13605.t1.exon9;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 2665 2890 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 2139 2383 . - . ID=g13605.t1.exon10;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 2139 2383 . - 2 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 1525 1863 . - . ID=g13605.t1.exon11;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 1525 1863 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 1026 1250 . - . ID=g13605.t1.exon12;Parent=g13605.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 1026 1250 . - 0 ID=cds.g13605.t1;Parent=g13605.t1 #PROT g13605.t1 g13605 MSTMSISSCGDDERAPLMGHRRRLDSTEVAGLRQRTLSTAAADNWDSLDYDRCENSLYMERVRSEPLSQQRWHSGIKWTVTFMIAVATALVAFVINFATRKLLTARLDLFSREIDRCTSRGCLVVPVAINVALSVLLGVVSSLFSVWEPASAGSGVPEVICYLNGIKIPHVVRVKTLIAKSFGVVFSVASGMAVGKEGPMIHIGSIIAAGVSQGKSTSFKNIDSGFRMFRNDRAKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGSSFWNQALTWRSFFCAIASTFVLNLFLSGVDKGWGDLSNPGLITLGSFDDDLYNPTSNKPWTGYDLIAFALMAVGGGLFGALFNTLNKRITAWRMVHVHPRGGAAKVAEVALICAVTSTLMFVLSFWVGQCRSILDTENQDLIMRQFFCPKGTYNDMATIAFNGEEEAIKQLFHLTGNFTIPTLCTFFVVFFLIMCWTAGSWVSSGLFIPSLLCGAVYGRCVSVLIMTAFPGYQVNAGSYALIGAAAFLGGVVRMTISLAVMLIESTQHISYAMPLMVALMIAKLVADACNDGLYHIIIHLKKLPLLPWAATRPMRRFYAHQLMSKDVECIRELEQVRTIITLLRSKRHNAYPVVEDPDMDGPESRTSRDHGVFCGLIQRQHLIGMLRGRAYGPLGADGNVDCRQLAYDEMMDQYPRYPDIDEVVVPPEDMDLWMDMRPYMNPCPYLIQHKCPLHRVFELFRTMGLRHLVVVNRRNCVVGIITRADLAFVTFSPTPAKDEMRENSAGVV* # PASA_UPDATE: g13615.t1, single gene model update, valid-1, status:[pasa:asmbl_9962,status:3], valid-1 NODE_90_length_41739_cov_41.4537 . gene 28597 31163 . + . ID=g13615;Name=g13615.t1 NODE_90_length_41739_cov_41.4537 . mRNA 28597 31163 . + . ID=g13615.t1;Parent=g13615;Name=g13615.t1 NODE_90_length_41739_cov_41.4537 . five_prime_UTR 28597 28856 . + . ID=g13615.t1.utr5p1;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . exon 28597 29031 . + . ID=g13615.t1.exon1;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . CDS 28857 29031 . + 0 ID=cds.g13615.t1;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . exon 29115 30478 . + . ID=g13615.t1.exon2;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . CDS 29115 30478 . + 2 ID=cds.g13615.t1;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . exon 30771 31163 . + . ID=g13615.t1.exon3;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . CDS 30771 30905 . + 0 ID=cds.g13615.t1;Parent=g13615.t1 NODE_90_length_41739_cov_41.4537 . three_prime_UTR 30906 31163 . + . ID=g13615.t1.utr3p1;Parent=g13615.t1 #PROT g13615.t1 g13615 MVSMSKGRTVVAVLFVSFCAGLIFSRSGSRRDLDYGQPWKNLFDKKGTPIDGSVYGKKTWLVHPLIINPARASLSILQSADAELVRLFIGDTTWTPTTSVSHTDVVVFLPNYPRITGNVYDNGVFEQAKARAVLNRFPSVPFGPFEGGMRCNIARKSDMALCFQQLKNILLTEPAPELVQFVEKMRARVEGNGHSVYDFDNMIPPTFVFRRAADNAAEAKRLEEYAAELLHAANVGEQVPDADREGESDGEGVSDGEGVEGGSVAVPTAVAGVPMYIVKPDAGENGRGMLVVENAKEAIQIALAKSQASPVVVQRVVDSLLISGRARFDVRVYVVITSKEPLEIYANRRSTMIRVAPGDSMPPIAQKAQGGSAHAGGVAGGSGDGEDSDYDPSADANNGVEDGAAPASPTREDDEEGEIQPTDLRNFVTSSMVHKNPKLIWNLFQMTDYADEGDFRNEWEQALDRMLSFVPIPLGLYNTVAHHNGSFQVHTCDFLLDNRYSPWFLECNSVAQLARESAPDLFGEVHKTMMEDLVSLVTGSASGTTGTNTWDPIYSDG* # ORIGINAL: g13607.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 8349 12348 . + . ID=g13607;Name=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 8349 12348 . + . ID=g13607.t1;Parent=g13607;Name=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 8349 8505 . + . ID=g13607.t1.exon1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 8349 8505 . + 0 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 8647 8756 . + . ID=g13607.t1.exon2;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 8647 8756 . + 2 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 8868 8944 . + . ID=g13607.t1.exon3;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 8868 8944 . + 0 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 9064 9208 . + . ID=g13607.t1.exon4;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 9064 9208 . + 1 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 9324 9438 . + . ID=g13607.t1.exon5;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 9324 9438 . + 0 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 9572 9734 . + . ID=g13607.t1.exon6;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 9572 9734 . + 2 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 9881 9985 . + . ID=g13607.t1.exon7;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 9881 9985 . + 1 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 10102 10247 . + . ID=g13607.t1.exon8;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 10102 10247 . + 1 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 10368 10482 . + . ID=g13607.t1.exon9;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 10368 10482 . + 2 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 10608 11221 . + . ID=g13607.t1.exon10;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 10608 11221 . + 1 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 11342 11473 . + . ID=g13607.t1.exon11;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 11342 11473 . + 2 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 11578 11672 . + . ID=g13607.t1.exon12;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 11578 11672 . + 2 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 11842 12123 . + . ID=g13607.t1.exon13;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 11842 12123 . + 0 ID=cds.g13607.t1;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 12220 12348 . + . ID=g13607.t1.exon14;Parent=g13607.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 12220 12348 . + 0 ID=cds.g13607.t1;Parent=g13607.t1 #PROT g13607.t1 g13607 MPRRTAAAASASTMKISFILIVLSAIFVYHCASGRAMRTSKSPSIMPWPYPKPVVSPPYDEEVKEILSRMKLREKIGQMIQLDIIYILKAEALELDIEKLEYAVENYYVGSFLNSPTNPGLWGKVHNLNSSQWIDIISQIQTACTTKGNKIPMIYGLDSVHGANYIDGATLFPQQIGSAATFCPELIEQMGAVTAKDTRAVGIPWLFAPILDIAVQPIWPRVYETFGEDPYLASVMGAAIIRGMQGDGTEKSLRGSNTGKVAACAKHFLGYSNPRSGSDRSPSWIPDRLLWQYFIPSFRAAVGANVRTFMESYNEINGVPVASSSQYLKDLLRDELGFNGMLVTDYAEIEDLHDFHKVAATQEDAVKMAMMDTSIDMSMVPLDTSFADYVYKLVKSGEVPAERIDIAAGRILQLKKDLGLFEDSMPDPHARDIGTIGSKEDRELALDICRESVTLLKNDNNVLPITVRSLKKKRILVAGPSCDSISYQTGGWSVHWQGAYSDDEFPYGITVLDALKAATMGSRIDIVHEPGCDIDGEYTKASMASLISLARQSDVAVVCLGENIYAERFGDITDMTLPQGQQDVVAALNTTGLPIVVVLFQGRPRVLNEIPGMASSVVNAFLPGPDGGRCVAEILLGMTNPSGKMPISYPESTGALLQYYHKVNDMPVRFQWEFGHGLSYTTFWYSNLRANATVVHPGDYLQVSVSVTNKGQIPGKETVLLYLADDYRRVTPEIKMLKAFKKLDLRPSETKDVEFTLTTDDLAYYGVDKQRVIEEGSFTILCADISLKFTLVFA* # ORIGINAL: g13612.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 20609 21509 . + . ID=g13612;Name=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 20609 21509 . + . ID=g13612.t1;Parent=g13612;Name=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 20609 20698 . + . ID=g13612.t1.exon1;Parent=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 20609 20698 . + 0 ID=cds.g13612.t1;Parent=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 20917 21019 . + . ID=g13612.t1.exon2;Parent=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 20917 21019 . + 0 ID=cds.g13612.t1;Parent=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 21142 21509 . + . ID=g13612.t1.exon3;Parent=g13612.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 21142 21509 . + 2 ID=cds.g13612.t1;Parent=g13612.t1 #PROT g13612.t1 g13612 MSKGEVEAQGADAAGSGPKAGRLFVRAAHMTKWIVTGATFVVLVKFRTTEVIHFVSGACLCALLGRALKRTIKQPRPPTAVGMTGYGMPSSHGQTISFFGTYIFLAANHYRDAILSGLGALPSDSGRAAVTACGAAAVALSGWVSWSRVRLGFHTPAQVLVGVGVGTAFGASWFYLCHSAFARSLL* # ORIGINAL: g13608.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 13137 14009 . - . ID=g13608;Name=g13608.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 13137 14009 . - . ID=g13608.t1;Parent=g13608;Name=g13608.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 13137 14009 . - . ID=g13608.t1.exon1;Parent=g13608.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 13137 14009 . - 0 ID=cds.g13608.t1;Parent=g13608.t1 #PROT g13608.t1 g13608 MDYHTHDTLEGEPDFLSRKPACQFNFNADELVACCNELLEIEAVVMMPVMPAAALATAAHPRPATTTAPAQCAAAGSPPFGTVPAAQPPVTTIVGSHYQSLPATPTHSATVTIVQSQPSQPPSGLNASTGGAAPANLPSGTDPISTNHSTTSLNVSEQIHDFAWKVVDCVKFRLGNEMAFRMVGDDVYLTTSAYAVLRELLMDILHPAQTHAARSNAVDLMHRRHIYHLKKNKQYVAHRTSRTGKIGRTQAQHSRVRLLNDGSSLPCRFQAFVFDALPSFWEFPAQTTKK* # ORIGINAL: g13619.t1 original gene structure, not modified by PASA NODE_90_length_41739_cov_41.4537 AUGUSTUS gene 38008 39655 . + . ID=g13619;Name=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS mRNA 38008 39655 . + . ID=g13619.t1;Parent=g13619;Name=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 38008 38289 . + . ID=g13619.t1.exon1;Parent=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 38008 38289 . + 0 ID=cds.g13619.t1;Parent=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 38380 38637 . + . ID=g13619.t1.exon2;Parent=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 38380 38637 . + 0 ID=cds.g13619.t1;Parent=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS exon 38741 39655 . + . ID=g13619.t1.exon3;Parent=g13619.t1 NODE_90_length_41739_cov_41.4537 AUGUSTUS CDS 38741 39655 . + 0 ID=cds.g13619.t1;Parent=g13619.t1 #PROT g13619.t1 g13619 MNFMRSIRQVIRPKSSKVSGQQDQRSPQNVSSTDHTTKIVTPEECQHIEKKEKYSDDMSLFSLSADTTSSRTVSRTPSDDSGLGASLRRESTPSLEDDSLSSCTVSREVLGTIEVDPSRIHACIAKMIESAAPESLAGETLGIVGHILFMCIRHADHQGDRRLMTALATGILRQLRRKATYLERAGVDSQRDIDYGYCLELHAFWLSNTCTLLGHTYKYAEQGYESTFTSQHGLDPEASVNLSMVEMRAVLAHMCSRTFRPSLAAVVARIFRSLATLVWKEAAQGLAPLIKTFNYGNNDTRKRFEGSTLQELVTDATHVLESNGVHGSLIRQLAERVIAFADQHVRAAIERKIDRDERALTPKPVASESRDSIGVHDVPVAPRELGAASRSAINALVDQLAEVEDWFSFQFGETPTKFARQRRVVDTLGGGDETESDDSFEATGLVAATPFDTPVTIHFSQARVDFASIEIPRSLRLDGLAKKR* # ORIGINAL: g8910.t1 original gene structure, not modified by PASA NODE_2632_length_5596_cov_46.4715 AUGUSTUS gene 784 1699 . - . ID=g8910;Name=g8910.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS mRNA 784 1699 . - . ID=g8910.t1;Parent=g8910;Name=g8910.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 1608 1699 . - . ID=g8910.t1.exon1;Parent=g8910.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 1608 1699 . - 0 ID=cds.g8910.t1;Parent=g8910.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 784 1435 . - . ID=g8910.t1.exon2;Parent=g8910.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 784 1435 . - 1 ID=cds.g8910.t1;Parent=g8910.t1 #PROT g8910.t1 g8910 MRTPYKMQVRDRSHPYNTIHYATGAIEFNWSKLHHETLHFDATPNAVVRALDKVLNDLSDGDIAEISTATDMDLMEGVMDGTGASRQLEITPRLPPVAAQVLEQQQQKQYRYQQQQHQQQLMQQQQQQILQQQLLQLLQWQQQLPQKQRQQQQQQQPEQQQLPEHEIDEDIVPASLPIECRAKSCKCTRIFDSTAHRGMHELRVVKSLAKQGRLSVSAAHLDLMKMRLGKRWFRTYANEIGLRAQDM* # ORIGINAL: g8911.t1 original gene structure, not modified by PASA NODE_2632_length_5596_cov_46.4715 AUGUSTUS gene 2962 4875 . - . ID=g8911;Name=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS mRNA 2962 4875 . - . ID=g8911.t1;Parent=g8911;Name=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 4786 4875 . - . ID=g8911.t1.exon1;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 4786 4875 . - 0 ID=cds.g8911.t1;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 4332 4400 . - . ID=g8911.t1.exon2;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 4332 4400 . - 0 ID=cds.g8911.t1;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 3854 4002 . - . ID=g8911.t1.exon3;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 3854 4002 . - 0 ID=cds.g8911.t1;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 3346 3512 . - . ID=g8911.t1.exon4;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 3346 3512 . - 1 ID=cds.g8911.t1;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS exon 2962 3143 . - . ID=g8911.t1.exon5;Parent=g8911.t1 NODE_2632_length_5596_cov_46.4715 AUGUSTUS CDS 2962 3143 . - 2 ID=cds.g8911.t1;Parent=g8911.t1 #PROT g8911.t1 g8911 MAMNIISKEKKDIKWIGLPTNSAEECKRLESEKQTRLDRIKTKHAHLQELILQEIAFKSLVDRNRKVVDQNAGKLPPRHIPLPFIIVNTPKDSPIDLQMYRDKTEYFFQFKEAFEVHDDIEILKRMGLSFGLEGRRCTDADFRSACQMIPDQLKPYLTDLRQSASEGHSAATAARNSASSAAAPTAWTNGAIPPPPPGTAAPHQLHHTPLPSDRPEAK* # ORIGINAL: g10402.t1 original gene structure, not modified by PASA NODE_2751_length_5234_cov_43.4307 AUGUSTUS gene 1425 2906 . - . ID=g10402;Name=g10402.t1 NODE_2751_length_5234_cov_43.4307 AUGUSTUS mRNA 1425 2906 . - . ID=g10402.t1;Parent=g10402;Name=g10402.t1 NODE_2751_length_5234_cov_43.4307 AUGUSTUS exon 1425 2906 . - . ID=g10402.t1.exon1;Parent=g10402.t1 NODE_2751_length_5234_cov_43.4307 AUGUSTUS CDS 1425 2906 . - 0 ID=cds.g10402.t1;Parent=g10402.t1 #PROT g10402.t1 g10402 MGFVVSTLRKWTTGSDSARYETRNELQADPGSPSVDKARAQQLSSGGRGHGNKAQVPQSRATPSLVPSSSQPVADKDRVQQSGSGQSGKAPTLPPIAKTPPSAAVARGGQTHAAVTQPATKHNKDERSVSVVAGETPLFNSASQVPAQYLALMEGFPARLVEMRARAEALGLQHIARQLDALFECGKSSCVSETTQIQFVELSFKVIASFLDEYEAQSTEAKQRKAECDRISLKYQDIAVKYQDILRTRLSGAQGTATLDRRPDKYTERLKEYFVTTVNKSAKQVMESVKKHNTMPSGTPRLLYKKLRSRMNEVVFNGAWNHHKFRMREEIHRTFSAIGVQVDDTSADDLIARACSSGGRSAPGSADSNGWFVGMATAIEHEMMVMMEKELQERLYGTGMVLPREEARMNIKVCVEKAVPLLFDILRDLPTCAPLFYSSSQCATEAEVDGMFDVDADDDTDNAPVIRLTHYPAFLLDGKMLFQGHVFIMKVPQ* # ORIGINAL: g4716.t1 original gene structure, not modified by PASA NODE_1943_length_8414_cov_45.7592 AUGUSTUS gene 934 6970 . + . ID=g4716;Name=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS mRNA 934 6970 . + . ID=g4716.t1;Parent=g4716;Name=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 934 1256 . + . ID=g4716.t1.exon1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 934 1256 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 1662 1773 . + . ID=g4716.t1.exon2;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 1662 1773 . + 1 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 1902 2018 . + . ID=g4716.t1.exon3;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 1902 2018 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 2178 2270 . + . ID=g4716.t1.exon4;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 2178 2270 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 2683 2806 . + . ID=g4716.t1.exon5;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 2683 2806 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 3045 3136 . + . ID=g4716.t1.exon6;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 3045 3136 . + 2 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 3464 3553 . + . ID=g4716.t1.exon7;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 3464 3553 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 3732 4564 . + . ID=g4716.t1.exon8;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 3732 4564 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 4797 4834 . + . ID=g4716.t1.exon9;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 4797 4834 . + 1 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 5168 5269 . + . ID=g4716.t1.exon10;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 5168 5269 . + 2 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 5467 5546 . + . ID=g4716.t1.exon11;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 5467 5546 . + 2 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 5905 6036 . + . ID=g4716.t1.exon12;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 5905 6036 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 6224 6301 . + . ID=g4716.t1.exon13;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 6224 6301 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 6536 6595 . + . ID=g4716.t1.exon14;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 6536 6595 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS exon 6785 6970 . + . ID=g4716.t1.exon15;Parent=g4716.t1 NODE_1943_length_8414_cov_45.7592 AUGUSTUS CDS 6785 6970 . + 0 ID=cds.g4716.t1;Parent=g4716.t1 #PROT g4716.t1 g4716 MHALLHLSHVQGEFHDLSEFKKRFDKSTQEFDEVLQKRLQSSGKSRRFGSDAEADLDLEKHRKKHQAVSLAYMHQINGLRQRMQFEFMEKMVTYMKTIAGFFRQGQDRIEQIEHLLQDWSVRVNDMRTMYEQDSQATQIKMGEHINAAIPFQRVADPQLRRKKGYLFVQRSHYEKGLAAITGKKITWARQHCAVGNGKLLFEDDRDGKIEEKCHETVEIGQAMAEVAETSGRPYTFQVTTPTRVLMLQAESRGEMTDWIIAIRNSSAIDEMAYMAKRHDFLTKSVPQQPTAAEELPWNPDRKLKGRSWTVMGKLTVELVEATALPSKDGPCNAYAIISVNQQQHKTVKVKQSSNPRFNMHCQFDVSDADDILVVSVFDSQKMFAFQDEFIGSASLSITALPQGEAITQHVSLRRNAAPANLPTPTTRSHSSSNASLGSSSASLSDCGEVLMRIRFDPLSEKISMAHFKIISMLGRGGFGKVLQVQKLDTGQIYAMKIIKKTAAKNKEAFAAAVLREREIMLRVQHPFLMSLEFCFQSDTKLYFVLTYLNGGELYFHLKREGRFAEDRAKFYAAEICLALDYLHSMGVLYRQVVLKDLKAENVILDLYGHICLIDFGLCKEGFEDGMSTSTFCGTPDYVAPEVLMRKGYGKEVDWWSFGVLLWEMLFGRPPFEAGFLQETFSNILRKPIMPALVANVEEVCPVSHEAQAILLSLLNRRAEERLGAESDGREIMLHPFFADIDWNKLYRRQVVPPFKPNVKDALDTSCFNRKYTDEQAKDSLDESKLPDDEQEFFRGFTIDRARAQELFSADPDDSEEERE* # PASA_UPDATE: g4911.t1, single gene model update, valid-1, status:[pasa:asmbl_6184,status:3], valid-1 NODE_353_length_26267_cov_40.3123 . gene 9361 12270 . - . ID=g4911;Name=g4911.t1 NODE_353_length_26267_cov_40.3123 . mRNA 9361 12270 . - . ID=g4911.t1;Parent=g4911;Name=g4911.t1 NODE_353_length_26267_cov_40.3123 . five_prime_UTR 12194 12270 . - . ID=g4911.t1.utr5p1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 12191 12270 . - . ID=g4911.t1.exon1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 12191 12193 . - 0 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 11697 11877 . - . ID=g4911.t1.exon2;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 11697 11877 . - 0 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 11314 11514 . - . ID=g4911.t1.exon3;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 11314 11514 . - 2 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 10906 11039 . - . ID=g4911.t1.exon4;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 10906 11039 . - 2 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 10546 10656 . - . ID=g4911.t1.exon5;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 10546 10656 . - 0 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 10293 10382 . - . ID=g4911.t1.exon6;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 10293 10382 . - 0 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 9960 10126 . - . ID=g4911.t1.exon7;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 9960 10126 . - 0 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . exon 9361 9850 . - . ID=g4911.t1.exon8;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . CDS 9769 9850 . - 1 ID=cds.g4911.t1;Parent=g4911.t1 NODE_353_length_26267_cov_40.3123 . three_prime_UTR 9361 9768 . - . ID=g4911.t1.utr3p1;Parent=g4911.t1 #PROT g4911.t1 g4911 MRPILLQGHERSLTKIKYNREGDLLFSVAKDHFPSVWYSHNGERLGSYKGHVGAVWTCDVDWQTKNLLTGSADNTAKLWDVETGVCTKTYATRTAVRSCGFSYSGKSIFYTTDERMTYPCELVIQDIAESDPRLVIPVGVGEKNKVTAAVWGPLDRTIITGHENGTVSIWDASSGKRLSYERVHEGQINDIQLYADSSMFITASKDNYAKLLDTESLEVMKTYKTERPVNSAAISPIKNHVVLGGGQEARDVTTTSARVGKFDARFFHLVFEEEIGRVKGHFGPINTCAFHPDGKSYSSGGEDGYIRVHYFDEDYFDFDYEI* # PASA_UPDATE: g4912.t1, single gene model update, valid-1, status:[pasa:asmbl_6185,status:12], valid-1 NODE_353_length_26267_cov_40.3123 . gene 12429 16612 . - . ID=g4912;Name=g4912.t1 NODE_353_length_26267_cov_40.3123 . mRNA 12429 16612 . - . ID=g4912.t1;Parent=g4912;Name=g4912.t1 NODE_353_length_26267_cov_40.3123 . five_prime_UTR 16548 16612 . - . ID=g4912.t1.utr5p1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 16450 16612 . - . ID=g4912.t1.exon1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 16450 16547 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 16094 16200 . - . ID=g4912.t1.exon2;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 16094 16200 . - 1 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 15784 15918 . - . ID=g4912.t1.exon3;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 15784 15918 . - 2 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 15467 15546 . - . ID=g4912.t1.exon4;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 15467 15546 . - 2 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 15172 15306 . - . ID=g4912.t1.exon5;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 15172 15306 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 14701 14862 . - . ID=g4912.t1.exon6;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 14701 14862 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 14439 14516 . - . ID=g4912.t1.exon7;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 14439 14516 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 14122 14254 . - . ID=g4912.t1.exon8;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 14122 14254 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 13856 13961 . - . ID=g4912.t1.exon9;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 13856 13961 . - 2 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 13442 13615 . - . ID=g4912.t1.exon10;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 13442 13615 . - 1 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 13115 13262 . - . ID=g4912.t1.exon11;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 13115 13262 . - 1 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 12804 12888 . - . ID=g4912.t1.exon12;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 12804 12888 . - 0 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . exon 12429 12682 . - . ID=g4912.t1.exon13;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . CDS 12576 12682 . - 2 ID=cds.g4912.t1;Parent=g4912.t1 NODE_353_length_26267_cov_40.3123 . three_prime_UTR 12429 12575 . - . ID=g4912.t1.utr3p1;Parent=g4912.t1 #PROT g4912.t1 g4912 MSCPFSQRSNEGPVKCTWTPNTKEPSPHHHHRQLREPKIMDTVLGHIGNTPMIRINKIAKSEGLKCELLAKCEFYNAGGSVKDRIGLRMVEEAEREGRLKKGDVLIEPTSGNTGIGLALAAAVKGYRCIIVLPEKMSQEKVDVLKALGAEIVRTPTEAAFDSPESHIGVAARLNKEIPNSHILDQYKNPYNPLAHYDGTAEEILEQCDGHLDMLVAGAGTGGTISGIARKIKERCPDCVIVGVDPFGSILAEPASLNQTDVTTYAVEGIGYDFIPTVLERQLIDKWIKSEDKTSLLMSRRLIKEEGLLCGGSSGTAMAAAIQAAKELGPGKKCVVVLPDSVRNYMTKFLNNEWMEDRGFIEPAKSVNDGEWWSTKNVGELQLSAPLTVLPTVTCADAVDLLRREGFDQVPVVDDKSRILGMVTEGSLMSKLMAKRVKPSDEVSAALYKQFKQISLKTTLGELSRILDRDHFAVVVHSQRCYSSSKDNITKQVVVGIVTRIDLLNYIMAHPHSSTN* # PASA_UPDATE: g4909.t1, single gene model update, valid-1, status:[pasa:asmbl_6183,status:12], valid-1 NODE_353_length_26267_cov_40.3123 . gene 1886 3214 . - . ID=g4909;Name=g4909.t1 NODE_353_length_26267_cov_40.3123 . mRNA 1886 3214 . - . ID=g4909.t1;Parent=g4909;Name=g4909.t1 NODE_353_length_26267_cov_40.3123 . exon 3089 3214 . - . ID=g4909.t1.exon1;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . CDS 3089 3214 . - 0 ID=cds.g4909.t1;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . exon 2670 2829 . - . ID=g4909.t1.exon2;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . CDS 2670 2829 . - 0 ID=cds.g4909.t1;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . exon 1886 2288 . - . ID=g4909.t1.exon3;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . CDS 2170 2288 . - 2 ID=cds.g4909.t1;Parent=g4909.t1 NODE_353_length_26267_cov_40.3123 . three_prime_UTR 1886 2169 . - . ID=g4909.t1.utr3p1;Parent=g4909.t1 #PROT g4909.t1 g4909 MGKNDLHKAAKDGELDRIKKVLKGGLFSKKTDVNVTDDHSWTPLHYAAYEGHSEAVHLLVAHGADVHSRTIDGELPLHLAAKKGAVAACKALIEHGSPILSTDNNGWTPKIAADKVDQKEMVKFLENEEKFAER* # PASA_UPDATE: g4915.t1, single gene model update, valid-1, status:[pasa:asmbl_6186,status:3], valid-1 NODE_353_length_26267_cov_40.3123 . gene 23131 25860 . - . ID=g4915;Name=g4915.t1 NODE_353_length_26267_cov_40.3123 . mRNA 23131 25860 . - . ID=g4915.t1;Parent=g4915;Name=g4915.t1 NODE_353_length_26267_cov_40.3123 . five_prime_UTR 25794 25860 . - . ID=g4915.t1.utr5p1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 25743 25860 . - . ID=g4915.t1.exon1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 25743 25793 . - 0 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 25257 25450 . - . ID=g4915.t1.exon2;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 25257 25450 . - 0 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 24681 24861 . - . ID=g4915.t1.exon3;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 24681 24861 . - 1 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 24340 24414 . - . ID=g4915.t1.exon4;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 24340 24414 . - 0 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 23986 24136 . - . ID=g4915.t1.exon5;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 23986 24136 . - 0 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 23765 23791 . - . ID=g4915.t1.exon6;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 23765 23791 . - 2 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . exon 23131 23618 . - . ID=g4915.t1.exon7;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . CDS 23410 23618 . - 2 ID=cds.g4915.t1;Parent=g4915.t1 NODE_353_length_26267_cov_40.3123 . three_prime_UTR 23131 23409 . - . ID=g4915.t1.utr3p1;Parent=g4915.t1 #PROT g4915.t1 g4915 MSIDIRLKKADKTYRENEVVAGVVAVTSKGELPHSGLTLFMEGVVNLQLSAKSVGVFEAFYNSVKPIQLVSYSLEIAKPGKLPSGTTEIPFEFPLKPKAGQILYETYHGVFINITYVLRCDMKRSMLNKDLSKQVEFIVEYRPNPDKHKEQAVPFTITPSSLENVKKRDTVPDFKITGKVESVQCSLTKPFLGELVVEHCKAPIRSIELQLVRVETCGCAEGYAKDATEVQNIQIGEGNICRGFVIPIYMIFPRLFTCPTTSTKSFKIEFEINVVVVFEDTSLVTENFPIKLVRD* # ORIGINAL: g4910.t1 original gene structure, not modified by PASA NODE_353_length_26267_cov_40.3123 AUGUSTUS gene 4925 8027 . + . ID=g4910;Name=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS mRNA 4925 8027 . + . ID=g4910.t1;Parent=g4910;Name=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 4925 5027 . + . ID=g4910.t1.exon1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 4925 5027 . + 0 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 5307 5494 . + . ID=g4910.t1.exon2;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 5307 5494 . + 2 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 5866 5949 . + . ID=g4910.t1.exon3;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 5866 5949 . + 0 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 6165 6275 . + . ID=g4910.t1.exon4;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 6165 6275 . + 0 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 6453 6583 . + . ID=g4910.t1.exon5;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 6453 6583 . + 0 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 6951 7057 . + . ID=g4910.t1.exon6;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 6951 7057 . + 1 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 7297 7677 . + . ID=g4910.t1.exon7;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 7297 7677 . + 2 ID=cds.g4910.t1;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 7948 8027 . + . ID=g4910.t1.exon8;Parent=g4910.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 7948 8027 . + 2 ID=cds.g4910.t1;Parent=g4910.t1 #PROT g4910.t1 g4910 MDSRQRTTSMNEHKDSLPRDSAGSTTSINGMKISQAKDGSRVTTVVATDHAGNSHELSYTDTKVIGNGSFGVVFQAKLVESNDVVAIKKVLQDKRFKNRELQIMRLLSHCNIVKLRYFFYLNGDKKDEIYLNLVLEYVPETVFRVARHYSKMKQSMPMLFVKLYMYQLFRSLSYIHSLGICHRDIKPQNLLLDPQSGILKLCDFGSAKMLVKGEPNVAYICSRYYRAPELIFGATDYTTAIDVWSSGCVMAELMLGQPMFPGESGVDQLVEIIKVLGTPTREQIQTMNPNYTEFKFPQIKAHPWSKVFRSRTPPEALSLIEVLLEYTPTKRVGPFDALIHPFFDELRDPATRLPSGRALPALFDFSAHEMSVKPELRRVLIPAHYEGGSSEGTA* # ORIGINAL: g4913.t1 original gene structure, not modified by PASA NODE_353_length_26267_cov_40.3123 AUGUSTUS gene 16876 21234 . - . ID=g4913;Name=g4913.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS mRNA 16876 21234 . - . ID=g4913.t1;Parent=g4913;Name=g4913.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 20373 21234 . - . ID=g4913.t1.exon1;Parent=g4913.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 20373 21234 . - 0 ID=cds.g4913.t1;Parent=g4913.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 16876 20198 . - . ID=g4913.t1.exon2;Parent=g4913.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 16876 20198 . - 2 ID=cds.g4913.t1;Parent=g4913.t1 #PROT g4913.t1 g4913 METVGDGRAHINSDSVQSVPSTVDEKPSQQPSASVEMEWIPEQVDHGPSAAGTNATDDSSGAALNDHHAITISATDAVDLKVVGAAGDSSVFAAYNIPSGMHTEQSHEPHPPVSDVFVASADGFDDAVSALGALAEFAAAPSTVIPPAGTLGEDDSIDVVDGSPFHQAVVNGDAIADDASTGADDSYEAAPAEPRDGAGVSHRGRGVGRGRGRGRGRGRGVQRDAGNRQDPVEALSPELVACHRLLEDISSKQYHNISFPFLYPVDVKGLGLANYAEIVHRPMDLSTLSQRLNNNLYSNITEFVTDLRLIFYNCYLYNGPTNDVSKLGQRLEAILEQKLALLPRSLREKTTLALTTPGDFGGSCVGDDGKGGRRRARAGPQSIMKALEEERANAEREYRRRKTEEHRQQQLELMSSVAQWESEHLDRKKLAALGESPDFCSAALMLSAFAGVLGLPYYSFEELELAVIFPYESDYAARVHLALLRPTREDRKRIANMEEDIPFEYWDAKLRTRFRKWHEAFVKSLVAVNTPSNNHRVASMEDPETDSVVAPVAGTDAYFPPEYVEIHSLAGGENVLEKRRFSDLPITLRARILRLLCECAVEETPELAAELVDPDALRATLLGKDADGNDFYFFKQFIDSECRIYQQLAKPPQRPKPPQPKTPKAEKTKGKDQGVSTGKKKKQTTTPTPAQSTGKRKRGDIDAEEAEATLSAKIKRVSMATPGERISARLRGTGAPEVEASQAEVTVTPTSRRRTSAKEATPAHNVHEESDDTPRRATRGRTASATGGAKATSARDESAEEEAQETPRRELRARSGVAALASPVMAASTGKGKRVEKPAETPSKTVSAKRATRSSASEPEAAETTPLVTRRATRSHPVGEHDDSDGEAHDDAKSAQKANSGRQSGRKEESVRRSSPRGASSQTPASATIKGRGARARETTDTEEEALVGTDRSVRRRSSRRDSHAEEAFVELPPAKRQRVSERNMTPSAADKVEVEAEMKKKAERHPGKRDAASEVELLDAPERTKTHVTGSAERKEKRGVGSARNRKTAPIDSNDAPDAAQEAPETEDTDGPTVVPETADVAMVDSADHVSVSADEKPSVDATPAPMDGIEADGTPLAHKDGDVGVADAGEIKAEHVAVPSESVVAVFDATSETAVSAPVPSHDAANATPATALSSREAGPSEPGVRVTRHRLQQDAATATAGAAASALAVESGIKDEKKDDGEGVGGVVLAAPIADSPYCVDPRLEEAFRSYDGFCIVCWDAEESKAFAQRLAAGGGSGKRRNAELAESILAIIPEMEEAAPRVEKERLRVRLALLKEFPTAHARFAELRAKAAPEAEAAALAALTAAPATEGAERMDAVVVHAAVEDADVAVAGRMAEGQAAVVTEAVATV* # ORIGINAL: g4914.t1 original gene structure, not modified by PASA NODE_353_length_26267_cov_40.3123 AUGUSTUS gene 21905 22816 . + . ID=g4914;Name=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS mRNA 21905 22816 . + . ID=g4914.t1;Parent=g4914;Name=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 21905 22055 . + . ID=g4914.t1.exon1;Parent=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 21905 22055 . + 0 ID=cds.g4914.t1;Parent=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 22236 22358 . + . ID=g4914.t1.exon2;Parent=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 22236 22358 . + 2 ID=cds.g4914.t1;Parent=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS exon 22605 22816 . + . ID=g4914.t1.exon3;Parent=g4914.t1 NODE_353_length_26267_cov_40.3123 AUGUSTUS CDS 22605 22816 . + 2 ID=cds.g4914.t1;Parent=g4914.t1 #PROT g4914.t1 g4914 MTRERSNIELGDITHHNIKQLRLLNSVVFPVSYNEKFYKEVQEVGEFAKLAFFNDIMVGAVCSRTEPCETGGKKLYIMTLGCLAPYRRLGIGSLMLNHILDECKKHEEIAEVYLHVQVNNDEAIGFYKKFGFDIRETKEDYYKRIEPSQAHLLVKQINHEK* # ORIGINAL: g4606.t1 original gene structure, not modified by PASA NODE_1709_length_9575_cov_38.4542 AUGUSTUS gene 162 6547 . - . ID=g4606;Name=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS mRNA 162 6547 . - . ID=g4606.t1;Parent=g4606;Name=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 6082 6547 . - . ID=g4606.t1.exon1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 6082 6547 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 5654 5877 . - . ID=g4606.t1.exon2;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 5654 5877 . - 2 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 5217 5297 . - . ID=g4606.t1.exon3;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 5217 5297 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 4923 5035 . - . ID=g4606.t1.exon4;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 4923 5035 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 4553 4641 . - . ID=g4606.t1.exon5;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 4553 4641 . - 1 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 3570 4205 . - . ID=g4606.t1.exon6;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 3570 4205 . - 2 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 2938 3189 . - . ID=g4606.t1.exon7;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 2938 3189 . - 2 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 2529 2677 . - . ID=g4606.t1.exon8;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 2529 2677 . - 2 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 2216 2341 . - . ID=g4606.t1.exon9;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 2216 2341 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 1659 1991 . - . ID=g4606.t1.exon10;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 1659 1991 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 1331 1418 . - . ID=g4606.t1.exon11;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 1331 1418 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 966 1036 . - . ID=g4606.t1.exon12;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 966 1036 . - 2 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 697 804 . - . ID=g4606.t1.exon13;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 697 804 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 162 293 . - . ID=g4606.t1.exon14;Parent=g4606.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 162 293 . - 0 ID=cds.g4606.t1;Parent=g4606.t1 #PROT g4606.t1 g4606 MTTPRKRPRDETDNAASATRAAVGVGVDGNDGSADSTPQHKRRRVKASRSGGDNTRSPTTPSSHQVNGVSGHKRSIPSPDVEVADASAISGRTTFRGKRNSSAPLDNASRNPNRKRRKGARKKAIAAVDVDALLTKRYRGRNKGKFPQYSLWAVVFRDEILPSLYAKTATLHAYLSRIFNGRDHLFVTKTDTAEYRRLVLRTLVGTPHGKGDYTARGGVDPFKQHSSQKEIVHRAINMVFRSSGMSPSDVIALGYRKMRDGGNGCITDMPGIESYYPNTIVNFLKGRNWETLLERIGDDLMLHLLVNTAMFAPIDGSDSYFQVSGVSASDIVRPTTQQTAVFRSDSLFAPPINDRNAVSGQPGPGKVTDSNGARNFPARTASVVGMSSQKASSKPSVHGVAAPAHTPTAHSPIVPRNVPTSLIDRQPSLAANAYSSEVGGLEADGIATAVKRPTLVRGDTLELFDTDGIAPIAPSCNVSKAVDADAHGRHSMSVAVVGNGVGGPLPALVRTGTLVLPSLDADDDNAVPGPVMDDGGATAITLPTWPVNSSAQVIASTQSQGNGTGALSVAEIDERLGHVPAGGKVNGSVAKGNRAPSSLVFVRRSQMFYNTGRKERIGRDFSLDRFEPSNRGAKRLVVVLTSGAPVSAAVGNRQAPTGGGEGTKTKKRRKIVRTDGRLAALEVLALRMLRRHRKCKYATVANLRAPLPDPIRRYARTQALNSVSVNRQSGCTSGADSAAVDTGYLTQEEDSDSSDDDGTRYGNGVSMGNDGDAGDRSGAPRRGHSVTPVGDTACPDEAPGNEGGGTNGLRHADLIGKFSTYQQVTSFIVAAMRKVIPKQLWGTPHNRTVVEKAVGVFIKLKKFERFAVQTATTGFRARDCEWLGGFSHQVQQRVVIAVLRWLFEGFVIPLVESFFYVTESAPYRNRMFYYRKQLWNRVYGIGMTSIRGDLLAPMRK # ORIGINAL: g4607.t1 original gene structure, not modified by PASA NODE_1709_length_9575_cov_38.4542 AUGUSTUS gene 7018 9503 . + . ID=g4607;Name=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS mRNA 7018 9503 . + . ID=g4607.t1;Parent=g4607;Name=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 7018 8251 . + . ID=g4607.t1.exon1;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 7018 8251 . + 0 ID=cds.g4607.t1;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 8461 8588 . + . ID=g4607.t1.exon2;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 8461 8588 . + 2 ID=cds.g4607.t1;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 8850 8927 . + . ID=g4607.t1.exon3;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 8850 8927 . + 0 ID=cds.g4607.t1;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 9167 9213 . + . ID=g4607.t1.exon4;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 9167 9213 . + 0 ID=cds.g4607.t1;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS exon 9395 9503 . + . ID=g4607.t1.exon5;Parent=g4607.t1 NODE_1709_length_9575_cov_38.4542 AUGUSTUS CDS 9395 9503 . + 1 ID=cds.g4607.t1;Parent=g4607.t1 #PROT g4607.t1 g4607 MRGLCLQGAALRAWTSSGLRCVPQAPHVRVCAPAVRTFNPQTNVAGERGDVSPLVLSRDYGTATERRMPQETSKAIAPTIPPGTRRKAITIVKDPLSNFVLGETTLRSGQKVSAAIEAFDTFERVETRTRVRNVIGTPDAALAKKTIKSLNKLDRASVLAQLETGDDDISAQETAPRVPRSVSMEAWRRRKLSVGQAAITHEDAGGESPGVMNRQPLSVRASSAPTAAASSPILSSDAGNAEPIAVKQRKATDDTVQLSADATVHVPRTPAGKLPRDSAEQYNSTAVDADVTAKVGRASDAGAATVGSASGVDVGSLEVRDARVDGRVEKPIASAGVGAGLGADDDVAVRVGEAEGASTADAVPSHGLGNDVAADSRAADGNDAAKAPRRSTISAALPKALVGQPENMLREGSVLMSFVMPETLPADMKLLKVAVVGSANVGKSTLVNSIIGQKVSIVSDKPQTTRDRVLGVWTESSLQVVMFDTPGVVSPEFAKKLNFARPLVNEAWHSADEADLCECACTPRADGTFLL* # ORIGINAL: g233.t1 original gene structure, not modified by PASA NODE_4463_length_1586_cov_33.188 AUGUSTUS gene 936 1450 . - . ID=g233;Name=g233.t1 NODE_4463_length_1586_cov_33.188 AUGUSTUS mRNA 936 1450 . - . ID=g233.t1;Parent=g233;Name=g233.t1 NODE_4463_length_1586_cov_33.188 AUGUSTUS exon 1250 1450 . - . ID=g233.t1.exon1;Parent=g233.t1 NODE_4463_length_1586_cov_33.188 AUGUSTUS CDS 1250 1450 . - 0 ID=cds.g233.t1;Parent=g233.t1 NODE_4463_length_1586_cov_33.188 AUGUSTUS exon 936 1055 . - . ID=g233.t1.exon2;Parent=g233.t1 NODE_4463_length_1586_cov_33.188 AUGUSTUS CDS 936 1055 . - 0 ID=cds.g233.t1;Parent=g233.t1 #PROT g233.t1 g233 LLDNLGLIPVSEQELSTRVDAFRGLPEEIRRNFAEILVAEMTILYRSYAAAKSGGSASFQGQQGRDEYLEVLRRRARILITFSGMIQFRLPGDTNARLVRMEVLMN* # PASA_UPDATE: g6890.t1, single gene model update, valid-1, status:[pasa:asmbl_344,status:3], valid-1 NODE_1093_length_14036_cov_41.6229 . gene 75 2778 . + . ID=g6890;Name=g6890.t1 NODE_1093_length_14036_cov_41.6229 . mRNA 75 2778 . + . ID=g6890.t1;Parent=g6890;Name=g6890.t1 NODE_1093_length_14036_cov_41.6229 . five_prime_UTR 75 135 . + . ID=g6890.t1.utr5p1;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . exon 75 459 . + . ID=g6890.t1.exon1;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . CDS 136 459 . + 0 ID=cds.g6890.t1;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . exon 664 843 . + . ID=g6890.t1.exon2;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . CDS 664 843 . + 0 ID=cds.g6890.t1;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . exon 1212 2778 . + . ID=g6890.t1.exon3;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . CDS 1212 2465 . + 0 ID=cds.g6890.t1;Parent=g6890.t1 NODE_1093_length_14036_cov_41.6229 . three_prime_UTR 2466 2778 . + . ID=g6890.t1.utr3p1;Parent=g6890.t1 #PROT g6890.t1 g6890 MARGAINNISAGIAVGLGSSPPRAVPAFTQGGTSEAAEWSSPGAGDGSLPRGGSGGPTGHDHAAIVRVHRKILLDNPTEYAEFNAEDTMVLIATANYANNYGAVHICRVSDAVVFHRVNMFPFDVMSAWAPGNHFVTAITRGLASTASEIYTWWVSSDPEEDLTFMQRDFVPIDRGSCARRILVADLRRAERLAALRLRLSTQPVESDPPPHSDVTHAPNAASRAGARLGALASSILYAGSEGVRRARRASLSDIGAIASNSNSGSLSSSNSTSTSSVEEAVARSVPGHIMDTLGSVPMNVTELISGFLSRRSRSRSVSSLNNAEHTATTAAAAADSSARERANAPARTRTSPRGRNGAGIGEPRLRGSVASSQSSTHSSRASLRARSADDGGRLLLIYQTGEKLNRIGLKEISAPDVRFADRPLTDGDVDQGDASVGCVFITETGPIIGMSLSPDHTQLVVNVRPFIRNSDVPGDSVTPLISEAIEVHVWDLATRTMVRQLSGHRAFTPADAPFIIWVGLGGEHDDIVVSGAEDGCGHMWHKHYGAYLGRLEGHQDVVNAAACNPADPRMIITASDDFTLRVWR* # ORIGINAL: g6895.t1 original gene structure, not modified by PASA NODE_1093_length_14036_cov_41.6229 AUGUSTUS gene 12005 13816 . - . ID=g6895;Name=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS mRNA 12005 13816 . - . ID=g6895.t1;Parent=g6895;Name=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 13659 13816 . - . ID=g6895.t1.exon1;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 13659 13816 . - 0 ID=cds.g6895.t1;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 13420 13528 . - . ID=g6895.t1.exon2;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 13420 13528 . - 1 ID=cds.g6895.t1;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 13111 13155 . - . ID=g6895.t1.exon3;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 13111 13155 . - 0 ID=cds.g6895.t1;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 12005 12901 . - . ID=g6895.t1.exon4;Parent=g6895.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 12005 12901 . - 0 ID=cds.g6895.t1;Parent=g6895.t1 #PROT g6895.t1 g6895 MRPGSTPNSVVSEEWETIDPTPDIYQLFLEFNEAFFWGKLAGVEVRWSPRMTLCAGLCVYEGRGGLCSVRLSQPLLRYRPRKDTVETLLHEMIHAFLFVTANNRDHDAHGPEFHKHMDRINSSTGASISVFHSFHDEVDSYRQHWWLCDGPCKGKPPYFGLVKRAMNRPPSARDPWWIDHQLNCGGTYTKIKEPEKRVNKTTASEKGGDGPGKRAKKSGEGDVGTPSIVDAFKRVASGKKSEPGDQLKNDPADEKIGSGVGKPRSFLLGGVPMEPPLATDNRHDGRSRDGPWACDDGDGEGDAALTARCPVCNVVLRDTDEESMSDHVMACIGERSHTTAAVDVGGRRESGAIKIEKTNNQVVDLTAESAGRSTDVAAVECPVCSVLVAASNINAHLDDCCG* # PASA_UPDATE: g6893.t1, single gene model update, valid-1, status:[pasa:asmbl_349,status:12], valid-1 NODE_1093_length_14036_cov_41.6229 . gene 8125 8964 . - . ID=g6893;Name=g6893.t1 NODE_1093_length_14036_cov_41.6229 . mRNA 8125 8964 . - . ID=g6893.t1;Parent=g6893;Name=g6893.t1 NODE_1093_length_14036_cov_41.6229 . exon 8737 8964 . - . ID=g6893.t1.exon1;Parent=g6893.t1 NODE_1093_length_14036_cov_41.6229 . CDS 8737 8964 . - 0 ID=cds.g6893.t1;Parent=g6893.t1 NODE_1093_length_14036_cov_41.6229 . exon 8125 8444 . - . ID=g6893.t1.exon2;Parent=g6893.t1 NODE_1093_length_14036_cov_41.6229 . CDS 8358 8444 . - 0 ID=cds.g6893.t1;Parent=g6893.t1 NODE_1093_length_14036_cov_41.6229 . three_prime_UTR 8125 8357 . - . ID=g6893.t1.utr3p1;Parent=g6893.t1 #PROT g6893.t1 g6893 MFSAFARRAVQSVGPQSRRLASSHAEVVAPKIEPVVLPMPTAKANLSGYVVNHLPKINENVYLGVGAASFVISLFIASGMGVFTHFRLVNKGYAQSSVPVPRTA* # ORIGINAL: g6891.t1 original gene structure, not modified by PASA NODE_1093_length_14036_cov_41.6229 AUGUSTUS gene 2916 4183 . - . ID=g6891;Name=g6891.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS mRNA 2916 4183 . - . ID=g6891.t1;Parent=g6891;Name=g6891.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 4147 4183 . - . ID=g6891.t1.exon1;Parent=g6891.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 4147 4183 . - 0 ID=cds.g6891.t1;Parent=g6891.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS exon 2916 3853 . - . ID=g6891.t1.exon2;Parent=g6891.t1 NODE_1093_length_14036_cov_41.6229 AUGUSTUS CDS 2916 3853 . - 2 ID=cds.g6891.t1;Parent=g6891.t1 #PROT g6891.t1 g6891 MRPSDAAKLRDIADDPFREFDARCQSPNGSEDRWDVVLTMHAMDTAFGASFSEWIRDESNFPSVVVALRRILDDYDLLRLAEGLLWITQAWSVASVADLLSVCLLHWSNERKAMLVSLVTASWALFPDTFVVVRKLVASLSAPDAARFVSLVTEEWDTVAVHELCELLRQDLAWSIGYRNSFFTRLFLRLPSTLSASVSVPCADKRETETQWSVPPSPTALSCISEETFQPPTPTPTAEAARTLVIVEQCERPLLSDASTSLVDDSVLTVSSHHGTDAGGALQSSSSCSIGAAPKSATSGLRCAFSMNSTRSDTTTVQTEAAAS* # PASA_UPDATE: g6894.t1, single gene model update, valid-1, status:[pasa:asmbl_346,status:3], valid-1 NODE_1093_length_14036_cov_41.6229 . gene 9953 11606 . + . ID=g6894;Name=g6894.t1 NODE_1093_length_14036_cov_41.6229 . mRNA 9953 11606 . + . ID=g6894.t1;Parent=g6894;Name=g6894.t1 NODE_1093_length_14036_cov_41.6229 . five_prime_UTR 9953 10074 . + . ID=g6894.t1.utr5p1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . exon 9953 10131 . + . ID=g6894.t1.exon1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . CDS 10075 10131 . + 0 ID=cds.g6894.t1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . exon 10354 10521 . + . ID=g6894.t1.exon2;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . CDS 10354 10521 . + 0 ID=cds.g6894.t1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . exon 10774 11115 . + . ID=g6894.t1.exon3;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . CDS 10774 11115 . + 0 ID=cds.g6894.t1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . exon 11316 11606 . + . ID=g6894.t1.exon4;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . CDS 11316 11390 . + 0 ID=cds.g6894.t1;Parent=g6894.t1 NODE_1093_length_14036_cov_41.6229 . three_prime_UTR 11391 11606 . + . ID=g6894.t1.utr3p1;Parent=g6894.t1 #PROT g6894.t1 g6894 MAPYDCLKNSLKALNVFYAIIGIILIAVAAYAKGAAKLSSVSIAGGIIACGVFLFLVALIGFIGAHKHHQVLLFIYMVVLGIVFIIELGVSIAALAVSDGQKQDILYNGWVRLSDDAKNDIQSWGACCGFQNASMPPQYPDGRGTICPNAPVGNGTYDSLLTCFGKLESSLNKSFHAVGVVGIVFAFTELIGIALALAFRNQKNPKANPSAFL* # PASA_UPDATE: g6892.t1, single gene model update, valid-1, status:[pasa:asmbl_345,status:3], valid-1 NODE_1093_length_14036_cov_41.6229 . gene 5466 7248 . + . ID=g6892;Name=g6892.t1 NODE_1093_length_14036_cov_41.6229 . mRNA 5466 7248 . + . ID=g6892.t1;Parent=g6892;Name=g6892.t1 NODE_1093_length_14036_cov_41.6229 . five_prime_UTR 5466 5601 . + . ID=g6892.t1.utr5p1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . exon 5466 5700 . + . ID=g6892.t1.exon1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . CDS 5602 5700 . + 0 ID=cds.g6892.t1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . exon 5792 5892 . + . ID=g6892.t1.exon2;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . CDS 5792 5892 . + 0 ID=cds.g6892.t1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . exon 6119 6273 . + . ID=g6892.t1.exon3;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . CDS 6119 6273 . + 1 ID=cds.g6892.t1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . exon 6541 7248 . + . ID=g6892.t1.exon4;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . CDS 6541 7004 . + 2 ID=cds.g6892.t1;Parent=g6892.t1 NODE_1093_length_14036_cov_41.6229 . three_prime_UTR 7005 7248 . + . ID=g6892.t1.utr3p1;Parent=g6892.t1 #PROT g6892.t1 g6892 MLAVTRARTLSRVLCSRGCTAIRKYATSDKSGEQPPSTRRRPAPVDEFGTADVNTTNSLLQLLSDSKAAQSQTQPKYVSSEELKSKLSLDSMLFSPKHKTSILDKADRKRISFDAEPLGIFKKGAGLVSAIPASDITPSESASGAESAAADEFGDLNNDGDENDLNNMQNEIEVASRLRAFLDFSMRALAEENTPQVFPGRENVLGDTVPEGEESFEDHMKIGAFIGELGLPDGPERNMLERVRHILMFHPGYSLKEKEMVLEKLAVQLLDV* # ORIGINAL: g5967.t1 original gene structure, not modified by PASA NODE_4296_length_1858_cov_34.6433 AUGUSTUS gene 414 1485 . - . ID=g5967;Name=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS mRNA 414 1485 . - . ID=g5967.t1;Parent=g5967;Name=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS exon 1408 1485 . - . ID=g5967.t1.exon1;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS CDS 1408 1485 . - 0 ID=cds.g5967.t1;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS exon 1245 1312 . - . ID=g5967.t1.exon2;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS CDS 1245 1312 . - 0 ID=cds.g5967.t1;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS exon 1009 1035 . - . ID=g5967.t1.exon3;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS CDS 1009 1035 . - 1 ID=cds.g5967.t1;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS exon 704 866 . - . ID=g5967.t1.exon4;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS CDS 704 866 . - 1 ID=cds.g5967.t1;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS exon 414 584 . - . ID=g5967.t1.exon5;Parent=g5967.t1 NODE_4296_length_1858_cov_34.6433 AUGUSTUS CDS 414 584 . - 0 ID=cds.g5967.t1;Parent=g5967.t1 #PROT g5967.t1 g5967 MYGDKAIDLIRELKRSLHGGTVAPYNEDAIQQIIQEATALYAQVHATLMNKRCLLAYLHTRLQWLHRLRWEGGSVMPQHVRDLLGPSEQLYFAAYSKAVNNYSRDVGIDLNEDMAPPKDLYIEVRCLEDYGEIQTENGPINLARNTQHHLRRSDVEHLIRQGVLVHVG* # ORIGINAL: g4296.t1 original gene structure, not modified by PASA NODE_2097_length_7752_cov_42.2112 AUGUSTUS gene 6697 7008 . - . ID=g4296;Name=g4296.t1 NODE_2097_length_7752_cov_42.2112 AUGUSTUS mRNA 6697 7008 . - . ID=g4296.t1;Parent=g4296;Name=g4296.t1 NODE_2097_length_7752_cov_42.2112 AUGUSTUS exon 6697 7008 . - . ID=g4296.t1.exon1;Parent=g4296.t1 NODE_2097_length_7752_cov_42.2112 AUGUSTUS CDS 6697 7008 . - 0 ID=cds.g4296.t1;Parent=g4296.t1 #PROT g4296.t1 g4296 MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKTFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG* # PASA_UPDATE: g4295.t1, single gene model update, valid-1, status:[pasa:asmbl_3492,status:3], valid-1 NODE_2097_length_7752_cov_42.2112 . gene 3082 5524 . - . ID=g4295;Name=g4295.t1 NODE_2097_length_7752_cov_42.2112 . mRNA 3082 5524 . - . ID=g4295.t1;Parent=g4295;Name=g4295.t1 NODE_2097_length_7752_cov_42.2112 . five_prime_UTR 5219 5524 . - . ID=g4295.t1.utr5p1;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . exon 5006 5524 . - . ID=g4295.t1.exon1;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . CDS 5006 5218 . - 0 ID=cds.g4295.t1;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . exon 4268 4846 . - . ID=g4295.t1.exon2;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . CDS 4268 4846 . - 0 ID=cds.g4295.t1;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . exon 3082 3985 . - . ID=g4295.t1.exon3;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . CDS 3656 3985 . - 0 ID=cds.g4295.t1;Parent=g4295.t1 NODE_2097_length_7752_cov_42.2112 . three_prime_UTR 3082 3655 . - . ID=g4295.t1.utr3p1;Parent=g4295.t1 #PROT g4295.t1 g4295 MASIGQTAAVARASSLDRIFRQFVMRTRFFQDGFGTVEEINRILTLRAWAFSSRENLRSLVAPRHPVVIEKSETFRDCRIMSGRLQSPLTECLPGALPRESETAHFELILPKVPQERQPICIHFGGTGDHYFWRRRMFLAKPLLAQGIGSIILENPYYGVRKPAQQYRSSLRQLNHLFVMGASLVLESVALFQWCEKQGYGPFGVTGISMGGHMASLAAGAWHEPLAIVPCMSASTAAAVFIKGVMRHACAWKELSEQLKDGRPDLRQLLAAAAPNSPPSSVHEETVVLMRYLLDEATSLRNFLVPVTTKSTIFVVARHDAYVPPESTERMLQLWPGSELRYVDGGHVSSFFLRQGDFRRAITDAFARLPPKA* # PASA_UPDATE: g4294.t1, single gene model update, valid-1, status:[pasa:asmbl_3491,status:12], valid-1 NODE_2097_length_7752_cov_42.2112 . gene 59 1980 . - . ID=g4294;Name=g4294.t1 NODE_2097_length_7752_cov_42.2112 . mRNA 59 1980 . - . ID=g4294.t1;Parent=g4294;Name=g4294.t1 NODE_2097_length_7752_cov_42.2112 . five_prime_UTR 1870 1980 . - . ID=g4294.t1.utr5p1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . exon 1612 1980 . - . ID=g4294.t1.exon1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . CDS 1612 1869 . - 0 ID=cds.g4294.t1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . exon 1181 1303 . - . ID=g4294.t1.exon2;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . CDS 1181 1303 . - 0 ID=cds.g4294.t1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . exon 720 927 . - . ID=g4294.t1.exon3;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . CDS 720 927 . - 0 ID=cds.g4294.t1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . exon 351 474 . - . ID=g4294.t1.exon4;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . CDS 351 474 . - 2 ID=cds.g4294.t1;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . exon 59 192 . - . ID=g4294.t1.exon5;Parent=g4294.t1 NODE_2097_length_7752_cov_42.2112 . CDS 59 192 . - 1 ID=cds.g4294.t1;Parent=g4294.t1;3_prime_partial=true #PROT g4294.t1 g4294 MLSASIRSVNHTQWPSIHAHMHTGARWSAPTMHTQTLKHAHINFNCPTLMGAYLFPPPFSPLISCYVRFDIVRRILQDYFHLPVVQVLGMTDVDDKILAKAAAEGSHPGTVASRYESLFAADMARLGVLPPFATARVSEYIPEIIAFVKQLESRGFAYKSSADGSVYFDTAALPSYGALARGGEVQQMEDVSREMKVKKRASDFALWKASKPMESVGWNSPWGKGRPGWHIECSAMASHVFGSQLDIHTGGVDLRFPHHNNEIAQCVAHHGCDRWGRYFMHA # ORIGINAL: g2757.t1 original gene structure, not modified by PASA NODE_5537_length_811_cov_55.6101_potentialcontaminant AUGUSTUS gene 165 539 . - . ID=g2757;Name=g2757.t1 NODE_5537_length_811_cov_55.6101_potentialcontaminant AUGUSTUS mRNA 165 539 . - . ID=g2757.t1;Parent=g2757;Name=g2757.t1 NODE_5537_length_811_cov_55.6101_potentialcontaminant AUGUSTUS exon 165 539 . - . ID=g2757.t1.exon1;Parent=g2757.t1 NODE_5537_length_811_cov_55.6101_potentialcontaminant AUGUSTUS CDS 165 539 . - 0 ID=cds.g2757.t1;Parent=g2757.t1 #PROT g2757.t1 g2757 MVLISRQVNAAATNAAATTVGGSAANCISQTLNYASASHNDNDESWTMVVWADLSVAPDNAARLSNIPNDLMHVSLPAWSAKSSRYPPASGFVGGQFVFYSYNVVTETRAGNITVLNSQWVFTGQ # PASA_UPDATE: g4390.t1, single gene model update, valid-1, status:[pasa:asmbl_1824,status:12], valid-1 NODE_1510_length_10818_cov_45.5448 . gene 1804 3491 . + . ID=g4390;Name=g4390.t1 NODE_1510_length_10818_cov_45.5448 . mRNA 1804 3491 . + . ID=g4390.t1;Parent=g4390;Name=g4390.t1 NODE_1510_length_10818_cov_45.5448 . exon 1804 1910 . + . ID=g4390.t1.exon1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . CDS 1804 1910 . + 0 ID=cds.g4390.t1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . exon 2088 2169 . + . ID=g4390.t1.exon2;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . CDS 2088 2169 . + 1 ID=cds.g4390.t1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . exon 2306 2410 . + . ID=g4390.t1.exon3;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . CDS 2306 2410 . + 0 ID=cds.g4390.t1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . exon 2696 2813 . + . ID=g4390.t1.exon4;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . CDS 2696 2813 . + 0 ID=cds.g4390.t1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . exon 3247 3491 . + . ID=g4390.t1.exon5;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . CDS 3247 3488 . + 2 ID=cds.g4390.t1;Parent=g4390.t1 NODE_1510_length_10818_cov_45.5448 . three_prime_UTR 3489 3491 . + . ID=g4390.t1.utr3p1;Parent=g4390.t1 #PROT g4390.t1 g4390 MPSFGAAVGAALCVASSIAYAGLAASSLSVGVQASSFINIHATVIAANIISIGAVSCLCSLLARSVGDIVRYAFILVAIGNSVAALHTDASGTNAVDPSGILTGIATGLGVAILNLLSLREGGRAWSIPATLSGLVAALLQVSTSTCVREYIRTLSLPIAVGGVINSRASLPTALGVWYALVSLRLLSKQPGGGAFADSASAGPARPGGDKAARLRD* # ORIGINAL: g4392.t1 original gene structure, not modified by PASA NODE_1510_length_10818_cov_45.5448 AUGUSTUS gene 6760 7635 . - . ID=g4392;Name=g4392.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS mRNA 6760 7635 . - . ID=g4392.t1;Parent=g4392;Name=g4392.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS exon 7509 7635 . - . ID=g4392.t1.exon1;Parent=g4392.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS CDS 7509 7635 . - 0 ID=cds.g4392.t1;Parent=g4392.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS exon 6760 7322 . - . ID=g4392.t1.exon2;Parent=g4392.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS CDS 6760 7322 . - 2 ID=cds.g4392.t1;Parent=g4392.t1 #PROT g4392.t1 g4392 MTQDEKANLNTDYVGEQIFVVTERLVLRTYRNSDAPHIKALADDKQVNQYTLRMPFPYTDADAIHFLMLVRDKGIGDAEMFAVTERDPNGVIPDGDGPFLGGCGIHFDRPHSHASIGYWLGVPYWGKGYATEMARALVDRGFRVHGLNRVYAHHFPENTASARVLHKAGMTHEGMMRKHLLKDGQFMDDCVCGILRGEWMKAYCGGSTSASNDASTSSTMDTTTANVVA* # PASA_UPDATE: g4391.t1, single gene model update, valid-1, status:[pasa:asmbl_1822,status:3], valid-1 NODE_1510_length_10818_cov_45.5448 . gene 4251 6214 . + . ID=g4391;Name=g4391.t1 NODE_1510_length_10818_cov_45.5448 . mRNA 4251 6214 . + . ID=g4391.t1;Parent=g4391;Name=g4391.t1 NODE_1510_length_10818_cov_45.5448 . five_prime_UTR 4251 4392 . + . ID=g4391.t1.utr5p1;Parent=g4391.t1 NODE_1510_length_10818_cov_45.5448 . exon 4251 6214 . + . ID=g4391.t1.exon1;Parent=g4391.t1 NODE_1510_length_10818_cov_45.5448 . CDS 4393 5886 . + 0 ID=cds.g4391.t1;Parent=g4391.t1 NODE_1510_length_10818_cov_45.5448 . three_prime_UTR 5887 6214 . + . ID=g4391.t1.utr3p1;Parent=g4391.t1 #PROT g4391.t1 g4391 MTPTRRYLRHFTRGKVAALLLVIVAVGACVYFFDADRLIVTRAHQWMGMTDETNNGDVLTNARLALMSSREATIEHAATVDESPRDSSNHASGEEAPPNVESVARSAADVPAMFQLVDSANSVSHWKLNVTLLSWRRNHDCTHLGDKLILLPGRFAANAESYDMNTGAQAYMTLPNDDRLRLSHFVGLHVDGGRELWIPCSFVGSTINTEESAKSISILDTTTVPWGVRKGPALDPPRGGCGALLLHVTSASSTPDVCVFGGSVGSHDKGEFLSDVSCYNRDSSTWHKPLPSLPVVADHVNVVTAPAFQCPDGRQMPQRVFFLNFREAPYGKKNPSIYALDLLPNGSKMQPAPAGWYVFARDDDTEPRDAAGTLVSPSGRFLLMFGGLATRNVHDNNSARNAGISWTFVASKEIRAFDTCSKRWIANIARFSVPRFAIETCKVGEFAVTCGGASGNRHIQDQHGNMGDCEAFRLSDLEEAALARANALVDKDASADV* # PASA_UPDATE: g4393.t1, single gene model update, valid-1, status:[pasa:asmbl_1823,status:12], valid-1 NODE_1510_length_10818_cov_45.5448 . gene 8334 10818 . + . ID=g4393;Name=g4393.t1 NODE_1510_length_10818_cov_45.5448 . mRNA 8334 10818 . + . ID=g4393.t1;Parent=g4393;Name=g4393.t1 NODE_1510_length_10818_cov_45.5448 . five_prime_UTR 8334 8418 . + . ID=g4393.t1.utr5p1;Parent=g4393.t1 NODE_1510_length_10818_cov_45.5448 . exon 8334 10818 . + . ID=g4393.t1.exon1;Parent=g4393.t1 NODE_1510_length_10818_cov_45.5448 . CDS 8419 10818 . + 0 ID=cds.g4393.t1;Parent=g4393.t1;3_prime_partial=true #PROT g4393.t1 g4393 MMDRCKGVSVLALVVSFVVASLALPAHSAPATDQLVSRLKSLNFANSGTVRATDKFVYGIDSCYYLETDESFDTVNQCPYRYLVNPEGTCQASSVAQGTYFEAGSDVGAVSLAVAAIDSSAAHSCAKVCCGEAGCRAWMLFPAATPTFNCDAGSICCLLKGRHMTPKPFVASSDMRRIQPSQPSLYYTGSISSTVFSSPPLGIRSAVPLGGVAAGNFELRADGTFATWTIMNESPASSGKTPTMADASLAVRAIPANGGGSRSVTRLLRTHAPGGDGLVGVKQMAYAGSFPVSRLHVEDDDLPLDVTVFAYAPYRNGDLHFSATPAVVFTALVTNPTTEPINATFALTLPPYGWTDTFRARDGSVPVASVSSAEDCARLCWKSDPLNCSSWAVKEDECYLYDSLIPNSAALDGAHSGMRATWRVEPKEAGITYVSDSPGAEGGPHYGGITLRAVETERARATYGVAASLSQMFGDLSRDGELTINDVGGDALSAKGGAAATVTLQPGETLPLSIVLAWRFVAREFLAENVGNYYGNLYASSADAAKRLADETELAAMVHDALAFHSPFLNSTMPAWLGDSLLNSASHIRTAMYLRNGLWRQWEAPDCPDMDSVHNDYQRHVPYALAFPWTEQHKMRYWAKYQLDNGMVQEYFGGTQPQPIDTPGGRAMGDVTSVWLIEFLELYRTTNDSAFFRELYPNAARAAAWLMDTAASGAGLPPYLTCTYDLLNLQLSKYATYNAHLHITSMLACVEVAELAGDEPLRSACAAAVDTGKAALDEFLWLSAGNGTGHFRVHDTSPNI # ORIGINAL: g4389.t1 original gene structure, not modified by PASA NODE_1510_length_10818_cov_45.5448 AUGUSTUS gene 293 1338 . + . ID=g4389;Name=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS mRNA 293 1338 . + . ID=g4389.t1;Parent=g4389;Name=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS exon 293 441 . + . ID=g4389.t1.exon1;Parent=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS CDS 293 441 . + 2 ID=cds.g4389.t1;Parent=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS exon 616 772 . + . ID=g4389.t1.exon2;Parent=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS CDS 616 772 . + 0 ID=cds.g4389.t1;Parent=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS exon 914 1338 . + . ID=g4389.t1.exon3;Parent=g4389.t1 NODE_1510_length_10818_cov_45.5448 AUGUSTUS CDS 914 1338 . + 2 ID=cds.g4389.t1;Parent=g4389.t1 #PROT g4389.t1 g4389 QNEIQGLTSGARNGRVVIDYNTYFGNGWNPRQSRAGAAAINGVALPTLQDIRTKTAFEAHGFSTDPGVNPSTFRLQIAPACGPMPAVLTSAIATVDAASVISPFPVPADFSGTDYADANPGFKSPDSLTVGAGCAVASRATNEDVWEAENPWPLYGDDGSASTSSDPPTNNGDKPSGAASSSSAVAIGVAVGVSVGVLALGAAGFAAYRSKRGRVLSKGYQSHSTSNMLKSEGELSMNPLRG* # PASA_UPDATE: g2824.t1, single gene model update, valid-1, status:[pasa:asmbl_7201,status:12],[pasa:asmbl_7202,status:12], valid-1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . gene 673 1676 . - . ID=g2824;Name=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . mRNA 673 1676 . - . ID=g2824.t1;Parent=g2824;Name=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . five_prime_UTR 1642 1676 . - . ID=g2824.t1.utr5p1;Parent=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . exon 1231 1676 . - . ID=g2824.t1.exon1;Parent=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . CDS 1231 1641 . - 0 ID=cds.g2824.t1;Parent=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . exon 673 1057 . - . ID=g2824.t1.exon2;Parent=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . CDS 938 1057 . - 0 ID=cds.g2824.t1;Parent=g2824.t1 NODE_4299_length_1854_cov_33.7195_potentialcontaminant . three_prime_UTR 673 937 . - . ID=g2824.t1.utr3p1;Parent=g2824.t1 #PROT g2824.t1 g2824 MPATHIASALQYHVETASELAANFAGADAASIAGVDTVASFEAASPTTQALIEGSTAGGNIVAAQSSPAGEGVGTGTGGGSGGSAVSAGAAAGIAVGCAVGCAAVAAAVGYKVAEKRTASGGGLGSRTDSQELDLYQRPENGIEPAKRKPKQGVDVYDYDTKNKHKSLTARGVYDD* # ORIGINAL: g5078.t1 original gene structure, not modified by PASA NODE_3092_length_4338_cov_41.4438 AUGUSTUS gene 1405 2148 . + . ID=g5078;Name=g5078.t1 NODE_3092_length_4338_cov_41.4438 AUGUSTUS mRNA 1405 2148 . + . ID=g5078.t1;Parent=g5078;Name=g5078.t1 NODE_3092_length_4338_cov_41.4438 AUGUSTUS exon 1405 2148 . + . ID=g5078.t1.exon1;Parent=g5078.t1 NODE_3092_length_4338_cov_41.4438 AUGUSTUS CDS 1405 2148 . + 0 ID=cds.g5078.t1;Parent=g5078.t1 #PROT g5078.t1 g5078 MGSVTAYVMKPVQGNLRKEGGHTHEFIGIDSENTTHYKFEIGVKLTTGARQEWKGIDLIGSKSHRRGRAETCASDRAEELETGRNVRPRREASAMNSTFTFSHPSHLAATGVVGDGTTSAAIAPGDVEFSQPPPMAAPSASTSSVDDIDEKGRSALLRAIFNAWNGDTSRDRIKELIDNGAGLEWATKWGSQTALHVAVGRSPGVAKAILDVLTGDADANTPRMTTTARRRYNVRDARSILTHASKR* # ORIGINAL: g3031.t1 original gene structure, not modified by PASA NODE_23119_length_89_cov_65.7143_potentialcontaminant AUGUSTUS gene 2 89 . + . ID=g3031;Name=g3031.t1 NODE_23119_length_89_cov_65.7143_potentialcontaminant AUGUSTUS mRNA 2 89 . + . ID=g3031.t1;Parent=g3031;Name=g3031.t1 NODE_23119_length_89_cov_65.7143_potentialcontaminant AUGUSTUS exon 2 89 . + . ID=g3031.t1.exon1;Parent=g3031.t1 NODE_23119_length_89_cov_65.7143_potentialcontaminant AUGUSTUS CDS 2 89 . + 2 ID=cds.g3031.t1;Parent=g3031.t1 #PROT g3031.t1 g3031 RRPQRRSRRPQRRSRRPQRRSRRPQRRSR # ORIGINAL: g2620.t1 original gene structure, not modified by PASA NODE_3084_length_4366_cov_39.7297_potentialcontaminant AUGUSTUS gene 3300 4037 . - . ID=g2620;Name=g2620.t1 NODE_3084_length_4366_cov_39.7297_potentialcontaminant AUGUSTUS mRNA 3300 4037 . - . ID=g2620.t1;Parent=g2620;Name=g2620.t1 NODE_3084_length_4366_cov_39.7297_potentialcontaminant AUGUSTUS exon 3300 4037 . - . ID=g2620.t1.exon1;Parent=g2620.t1 NODE_3084_length_4366_cov_39.7297_potentialcontaminant AUGUSTUS CDS 3300 4037 . - 0 ID=cds.g2620.t1;Parent=g2620.t1 #PROT g2620.t1 g2620 MPSTDFETAVDSVAVRSDTWSIYILRKCDDVDCEDTVFMFQNNYHSQQDAVSHTVNTVNMHATILVIKEQIDGTGQRYNSAGLRASIKLHKHDGDALIRAYDGAGSCVWIPISFAESGGAHTSAYARTILPAPAEWQETNGLKIVWNDKPKMVRPLAPFFRFMQNMRDQVTAVMPGQKPSEVSKRLGEMWMQLDDTEKNKYFSLYNAEMVVYKSENAKQYEAKMQENSALLEAYAGFRPRTTVSA* # ORIGINAL: g13414.t1 original gene structure, not modified by PASA NODE_2672_length_5490_cov_36.6979 AUGUSTUS gene 27 1942 . - . ID=g13414;Name=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS mRNA 27 1942 . - . ID=g13414.t1;Parent=g13414;Name=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 1835 1942 . - . ID=g13414.t1.exon1;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 1835 1942 . - 0 ID=cds.g13414.t1;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 1288 1476 . - . ID=g13414.t1.exon2;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 1288 1476 . - 0 ID=cds.g13414.t1;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 944 1018 . - . ID=g13414.t1.exon3;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 944 1018 . - 0 ID=cds.g13414.t1;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 27 245 . - . ID=g13414.t1.exon4;Parent=g13414.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 27 245 . - 0 ID=cds.g13414.t1;Parent=g13414.t1 #PROT g13414.t1 g13414 MAHDISLADSDLEEDQCCCSRRFFVVVVFLICFLLALFGIGVCGFALWILLRNGQFGAFVEQRLKILCGALICFGGVIFAISIVGILGAVRRHLTVLAWFMGLFVLLFLVEVAASVAVYLLRNQLDCCGLDSPNEWIAVGLTYVPQSCCMSAYRKDASCGMTSSYINSTPCSDAIAHFVSRSLVKIVGIVAAVIVLQ # ORIGINAL: g13415.t1 original gene structure, not modified by PASA NODE_2672_length_5490_cov_36.6979 AUGUSTUS gene 3007 5256 . + . ID=g13415;Name=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS mRNA 3007 5256 . + . ID=g13415.t1;Parent=g13415;Name=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 3007 3177 . + . ID=g13415.t1.exon1;Parent=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 3007 3177 . + 0 ID=cds.g13415.t1;Parent=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 3326 4948 . + . ID=g13415.t1.exon2;Parent=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 3326 4948 . + 0 ID=cds.g13415.t1;Parent=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS exon 5194 5256 . + . ID=g13415.t1.exon3;Parent=g13415.t1 NODE_2672_length_5490_cov_36.6979 AUGUSTUS CDS 5194 5256 . + 0 ID=cds.g13415.t1;Parent=g13415.t1 #PROT g13415.t1 g13415 MATLAQSTAVQTHRERGVASAPLAAARPGKTNAVVAPAHMHASAAMRKDSAPRKLNRSPSPHYFSSEDDFENEAWTPLESFVPTYSRTKSDATTLKRTSSTKASANATVRPSGTAGVPTSERVLQVRIPPNTIPVPPPIPVIAAAPFPQDGDDGFYLEHNRRDSMMGEVGTHIKTLAGALWDNLKGIVDVFVDGPTEGVTTKEGECASAVGSSTTSNNRTSAERDTSKDAHSNAPASTDGQRMFRRSSGVRSQFRNLGNNAAKTAGGAQPGTRRHSFLGTVQRISKQVVSKFGPAVPGAPNQATSVDTAGARQYIRRPLSPILAEESVQKTPKALRTVSHSSSPSAKSSTSAASSIRRQSLRQFYVRSPARSRGHADSPSAAMVRARLPLTPRTSRSSSADPEWEDLSVEDFTSTAPAAVSPQSQTNVPECESNPPPSMAGPPPPPPPPPPPPPCPPPSLGLKRGGACDESQSTPSNSKGAKAAVPANPLVDLQERLRTRMQRRVVNSAPDGDSAADPRSSVNAKQEQWAYIQAKGRKICVSDFLELAARQRECVEAACLRLARDASFMPKSLDDAENIAELLSTASQWYPGGTKEMKASVSEWGAVERKAELIVEFVK # PASA_UPDATE: g10382.t1, single gene model update, valid-1, status:[pasa:asmbl_9501,status:3], valid-1 NODE_810_length_17438_cov_42.8244 . gene 5670 8295 . - . ID=g10382;Name=g10382.t1 NODE_810_length_17438_cov_42.8244 . mRNA 5670 8295 . - . ID=g10382.t1;Parent=g10382;Name=g10382.t1 NODE_810_length_17438_cov_42.8244 . five_prime_UTR 8190 8295 . - . ID=g10382.t1.utr5p1;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . exon 6862 8295 . - . ID=g10382.t1.exon1;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . CDS 6862 8189 . - 0 ID=cds.g10382.t1;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . exon 6612 6706 . - . ID=g10382.t1.exon2;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . CDS 6612 6706 . - 1 ID=cds.g10382.t1;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . exon 5670 6409 . - . ID=g10382.t1.exon3;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . CDS 5946 6409 . - 2 ID=cds.g10382.t1;Parent=g10382.t1 NODE_810_length_17438_cov_42.8244 . three_prime_UTR 5670 5945 . - . ID=g10382.t1.utr3p1;Parent=g10382.t1 #PROT g10382.t1 g10382 MTRVAFLAKGTLGDIRPCVAVAVRLSRALGQSAHHDDGPQSALVGLTDSAVPINSELHAGPSVSSERLHTDVTVVFATHGHFRNSLHSQLQQNGIQFRSIDDDAAPASDASSEDAGRMTKRRRLATDTGHQRASSTDSRLCMDEALRCLDACSGAHLIVFNLFACEGVSIAEKLGARCAAISPFAVTRPPPPGFARMLKEEHADLCAALLSSPLTRSDSTAVDAADGLNACDGMRITMADVDCWLWRVFLDDHGDFRECIGLDPCPFRALMRADVSKHTTSNGRCDLPNGISSEGIVHRQQATCSGAWDSCAQIPLLYGISPHVMPRPAFWPSSVKLCGYFVAEEYSDTSFCTHHTVDGTHNEGVRCEPRAAANGDNPGAELHTVDTLPTLPGDGCAVHGSPPAVLPLGVTTGANNAAGVQAQGRESASSELPSDLEGFIAAHAGRVLLVTFGSMETIGVTDKNAAVFSECFVDALASLDMCAVVQSMGMIASCISARVERADRVFILRTFLPHERLIPLCAGVVHHGGAGTVATCLRCGIPQLVFPCMFDQREWAERVEWLGVGIAGTAYARVAGRADVCAPLGRLVRECGPLREKARHVALSLKAEDGVGVAVQAIVALMIGCHGV* # ORIGINAL: g10383.t1 original gene structure, not modified by PASA NODE_810_length_17438_cov_42.8244 AUGUSTUS gene 9065 12105 . - . ID=g10383;Name=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS mRNA 9065 12105 . - . ID=g10383.t1;Parent=g10383;Name=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 11803 12105 . - . ID=g10383.t1.exon1;Parent=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 11803 12105 . - 0 ID=cds.g10383.t1;Parent=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 10249 11547 . - . ID=g10383.t1.exon2;Parent=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 10249 11547 . - 0 ID=cds.g10383.t1;Parent=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 9065 10036 . - . ID=g10383.t1.exon3;Parent=g10383.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 9065 10036 . - 0 ID=cds.g10383.t1;Parent=g10383.t1 #PROT g10383.t1 g10383 MIATSVRQPRPPHVNVVGIALLFIALITVMQYGSTLYNVYQAITVDAARHKANLEMMGLAALVNAVLKLSRIESDASILDAFPDVAVTRRSGRRGLRDVPVESLDESECSPALRRVLSSADPADRLYCHGSAGLPGPRECTARNRFPMRADMWRRNTAGLTSHRQNSFLFHHPYDRLFSIRPFFLEAESVLSEESLKRSITIVVQASIDRVFLHLLKLVTVWRGPVSIAVLIESSEEEAMLSDYLAKNKLLRTWVDVHAVTRHGHTKQDATAFYPINALRNVALEGVRTEWMLVSDLDIMPNARMSVFLRQLFKAEASLASAYRTDSSVCPGLIAYITPALELPVGVPYNISKAGIKDGVFYSKAMAAAALKDGSMRPMHMYFSLAYMPTNYTRWMSESSVYEVPYSVRFEPYFIARRDLPRFNDSFVNRGGNFAQLVFHMHAAGYRFAVLPEVFVIDQPHDVMHRAPFVQRLSIMWAAFTQHVIDMYKVTIPETSKPSAYLPLKAKFANDVKAFPGGIYDPRLAPEVRARVDQVTTRPSFTLVVTLNAALWKHFEPVLGRFCVTHPTLWGVVMMWNDPQDTLPVLDSHDSLAGCAKPVHFRVHLEGRITHGYRPSNIPREAPDCVFMVGRGETATLNLDFHQDEIEFALDTWQTHQNQLVGFNPAGVALVEGEGDGESAGESDGESDGESDGESDGESDGESDGESERGRKGEREGGKEEDGDDDSGVVQLWRYAGLAEVVQNRRFQLVVSSPIMFHRKFLDSFFRLPKEITRHVDRSNDCDDIALNFAIAEESYLPPVWVDLVSDRVSLLEDEASGDADRAYVRDKCIAVFMNSFDMNPLVAGHTMYRFHRLSNS* # ORIGINAL: g10384.t1 original gene structure, not modified by PASA NODE_810_length_17438_cov_42.8244 AUGUSTUS gene 13142 16815 . + . ID=g10384;Name=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS mRNA 13142 16815 . + . ID=g10384.t1;Parent=g10384;Name=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 13142 13300 . + . ID=g10384.t1.exon1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 13142 13300 . + 0 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 13458 13708 . + . ID=g10384.t1.exon2;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 13458 13708 . + 0 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 13835 14512 . + . ID=g10384.t1.exon3;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 13835 14512 . + 1 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 14753 15524 . + . ID=g10384.t1.exon4;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 14753 15524 . + 1 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 15702 15806 . + . ID=g10384.t1.exon5;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 15702 15806 . + 0 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 15921 16104 . + . ID=g10384.t1.exon6;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 15921 16104 . + 0 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 16231 16313 . + . ID=g10384.t1.exon7;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 16231 16313 . + 2 ID=cds.g10384.t1;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS exon 16552 16815 . + . ID=g10384.t1.exon8;Parent=g10384.t1 NODE_810_length_17438_cov_42.8244 AUGUSTUS CDS 16552 16815 . + 0 ID=cds.g10384.t1;Parent=g10384.t1 #PROT g10384.t1 g10384 MRIHSAFGCASPCFFQSCETVFDTSGNESDGAFVENGVDDDNPAVIDVPLGCQVQRWDVRTRRRILSFQAHKSVVLTIAAAPRSVCGTPEFIDVVATGSFTGEITLWRHSDWVPLATVDVGVLSKVVSLSWAHTCTRESNGSVRLLLAACHKRSIFAKSVGTVTVFDVVVTPTMKGSGSTPIAHLTHRWDSKGDYTFCEWIPCADAHKQRVVVVGTDQGGMCARVAALSGYDGRIVQSTLIPLLVERPGAWSVGCAVVLSPALIAKNSGHLHASEGFPMESACHAQSVLEDRLAIGLKDGTVTCVSLSDTSFGETRWIAPIGSATVTSVAFCDDGLMIVPVMGRGLKVFREGSELTAEPLQLGIDGMVKFARLVGKRRDRLILCTESGLFLIALRRHETSDGSGPERPPTASVVSSVTCHSVLSCSVAWQPRGCLLASGGMGEVLIWRTSESGSAPPSVAVSERKGADEAAFSPHASRSSSDWNPAHCIPTNNLVRSIAWTPAGDMVVYGLLDGAVLSWRIPAAGDVDGTPRDTELCPDPDGSSVRVSETECAMFAMEGGVTCMRFSPRGLLSNGIVLAASDTTGRVTLWSMSIQRELGSVRHSEGLEVWSVAWKPRGLPMLATAGEDQLVVIWRVGDDCAESTRVTALVGHTMAVTSVDWSVTAIGEVLASVSDDRSVRLYDASGEDFPCLHVFKTHGLYLTYVRLETADQHGGEENDEPHDRICCCTEDGFLHMWCLRTKKRMLQMKLHGGSVEGLDWDSSRNLVASCGSDCSVMVTCHPRGHFEPHIDDTRVHRSDRIDGWGSQESDDDGDDGDDVRGGQCRSTGATE* # PASA_UPDATE: g10381.t1, single gene model update, valid-1, status:[pasa:asmbl_9497,status:12],[pasa:asmbl_9500,status:12], valid-1 NODE_810_length_17438_cov_42.8244 . gene 181 5641 . - . ID=g10381;Name=g10381.t1 NODE_810_length_17438_cov_42.8244 . mRNA 181 5641 . - . ID=g10381.t1;Parent=g10381;Name=g10381.t1 NODE_810_length_17438_cov_42.8244 . five_prime_UTR 5545 5641 . - . ID=g10381.t1.utr5p1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 5218 5641 . - . ID=g10381.t1.exon1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 5218 5544 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 4879 5076 . - . ID=g10381.t1.exon2;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 4879 5076 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 4469 4659 . - . ID=g10381.t1.exon3;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 4469 4659 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 4236 4287 . - . ID=g10381.t1.exon4;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 4236 4287 . - 1 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 3702 3893 . - . ID=g10381.t1.exon5;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 3702 3893 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 3347 3486 . - . ID=g10381.t1.exon6;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 3347 3486 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 2928 3088 . - . ID=g10381.t1.exon7;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 2928 3088 . - 1 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 2617 2692 . - . ID=g10381.t1.exon8;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 2617 2692 . - 2 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 2323 2486 . - . ID=g10381.t1.exon9;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 2323 2486 . - 1 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 1952 2017 . - . ID=g10381.t1.exon10;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 1952 2017 . - 2 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 1508 1723 . - . ID=g10381.t1.exon11;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 1508 1723 . - 2 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 1113 1304 . - . ID=g10381.t1.exon12;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 1113 1304 . - 2 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 697 833 . - . ID=g10381.t1.exon13;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 697 833 . - 2 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 496 598 . - . ID=g10381.t1.exon14;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 496 598 . - 0 ID=cds.g10381.t1;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . exon 181 339 . - . ID=g10381.t1.exon15;Parent=g10381.t1 NODE_810_length_17438_cov_42.8244 . CDS 181 339 . - 2 ID=cds.g10381.t1;Parent=g10381.t1;3_prime_partial=true #PROT g10381.t1 g10381 MSLRYTLMALSRHAQVLLRATASTRGWGARSAMDSANTAAVTARVRSFTTTRATRNNKEDSAPSQTQGGLASAFALPKIDANSTIPSIPIANSVKVVPTPEAGVIHDGVASPTVPTSPVSVSDEKPHRFGVMWFDNIFPIQIHRWDIRAMFIWSNSRKLDALLKGLVPEGVTITQVVPRMKDGGAFVHFDFCATQDVNAVYERIINYLKRYQPHTRFSSQEIRAHPVRGTPFLEDMLSRYPSNVIRIDYTGPPLQQELLFAELRPYGKIYDITPSPFSKDAPPYAIVRFKRMHGATSARNCFHGVKVNNTSVAVSYEAMLKTSAIKDFITKHPRIFVPAIGVVVGATTYVVFDPIRAFFIKNKLTHRFEFDWSQVGWLNWIRSSEALNRLMRKTLPTAVNTWSAREADELRVKARFKQEPDAVIFLAGPKGTGKTAIVQKAIKDKRYSISINLEQLSGRTEEEFLSKLAKTVGFFPAMTSLLWARSAAEAAVAALSGQKPSSSGSSSLTSQQVAKILECLTNALADISQVQRSLPPDQRDYPVLVIDGFSNENREAHEKFFDTLAVWAAGIAANHICHVVFVSDHAFAEEAINTLLGERKVDTIILSDASHESAVDFVRKNLPECPVVDADDAIRALGGRFSDLEALIRKVEGGKNINDAVDEIIQQAAVEIRKVGLGEDKGTKVGWSKTQFWSVVQRLAADEEVPYDEIRFSTFFKGDDAPLRAMFKSDLLSLNRESGTVTMLRPGRPVFREAFKQMLADPRMAGGLGVLSSKQLIEEEQKKIDAYEIEI # ORIGINAL: g11220.t1 original gene structure, not modified by PASA NODE_5337_length_901_cov_40.6538 AUGUSTUS gene 2 856 . + . ID=g11220;Name=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS mRNA 2 856 . + . ID=g11220.t1;Parent=g11220;Name=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS exon 2 100 . + . ID=g11220.t1.exon1;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS CDS 2 100 . + 0 ID=cds.g11220.t1;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS exon 413 497 . + . ID=g11220.t1.exon2;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS CDS 413 497 . + 0 ID=cds.g11220.t1;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS exon 635 718 . + . ID=g11220.t1.exon3;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS CDS 635 718 . + 2 ID=cds.g11220.t1;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS exon 822 856 . + . ID=g11220.t1.exon4;Parent=g11220.t1 NODE_5337_length_901_cov_40.6538 AUGUSTUS CDS 822 856 . + 2 ID=cds.g11220.t1;Parent=g11220.t1 #PROT g11220.t1 g11220 TVMDDADIELAVRSVLFAAVGTAGQRCTTTRRLMLHENIYQTFIDRLQAAYKHVKIGNPLEDGVLCGPLHTKRAVEDYKRCVAEVEKQAICVFIFVQQLQ* # PASA_UPDATE: g11441.t1, single gene model update, valid-1, status:[pasa:asmbl_5803,status:12],[pasa:asmbl_5804,status:12], valid-1 NODE_326_length_26884_cov_37.5291 . gene 20402 22889 . - . ID=g11441;Name=g11441.t1 NODE_326_length_26884_cov_37.5291 . mRNA 20402 22889 . - . ID=g11441.t1;Parent=g11441;Name=g11441.t1 NODE_326_length_26884_cov_37.5291 . five_prime_UTR 22833 22889 . - . ID=g11441.t1.utr5p1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 22822 22889 . - . ID=g11441.t1.exon1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 22822 22832 . - 0 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 22440 22620 . - . ID=g11441.t1.exon2;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 22440 22620 . - 1 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 22076 22174 . - . ID=g11441.t1.exon3;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 22076 22174 . - 0 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 21616 21675 . - . ID=g11441.t1.exon4;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 21616 21675 . - 0 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 21158 21352 . - . ID=g11441.t1.exon5;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 21158 21352 . - 0 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 20877 20916 . - . ID=g11441.t1.exon6;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 20877 20916 . - 0 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . exon 20402 20578 . - . ID=g11441.t1.exon7;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . CDS 20538 20578 . - 2 ID=cds.g11441.t1;Parent=g11441.t1 NODE_326_length_26884_cov_37.5291 . three_prime_UTR 20402 20537 . - . ID=g11441.t1.utr3p1;Parent=g11441.t1 #PROT g11441.t1 g11441 MSQGVPPPVTWAQRKDRLFVTVAVADIKNEEVKFEENKLTFRGTGRDNKNYFVELEFFGEIDPSASRFRSTGQDVSCEMKKKEEGPYWPRLLKTSGKVHFLKVDFNKWKDEDDEDLKDEALEDLGEGGMGGMGGMGGMMGGMGGMGGMGGMGGMGGMEELMAQMGGAGGMDFSKMMAQNGKMDFGGEDEGEDSDDDLPDLEETPAPQA* # PASA_UPDATE: g11442.t1, single gene model update, valid-1, status:[pasa:asmbl_5810,status:12], valid-1 NODE_326_length_26884_cov_37.5291 . gene 23763 25981 . + . ID=g11442;Name=g11442.t1 NODE_326_length_26884_cov_37.5291 . mRNA 23763 25981 . + . ID=g11442.t1;Parent=g11442;Name=g11442.t1 NODE_326_length_26884_cov_37.5291 . five_prime_UTR 23763 23855 . + . ID=g11442.t1.utr5p1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . exon 23763 23954 . + . ID=g11442.t1.exon1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . CDS 23856 23954 . + 0 ID=cds.g11442.t1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . exon 24074 24196 . + . ID=g11442.t1.exon2;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . CDS 24074 24196 . + 0 ID=cds.g11442.t1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . exon 24340 24909 . + . ID=g11442.t1.exon3;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . CDS 24340 24909 . + 0 ID=cds.g11442.t1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . exon 25077 25981 . + . ID=g11442.t1.exon4;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . CDS 25077 25496 . + 0 ID=cds.g11442.t1;Parent=g11442.t1 NODE_326_length_26884_cov_37.5291 . three_prime_UTR 25497 25981 . + . ID=g11442.t1.utr3p1;Parent=g11442.t1 #PROT g11442.t1 g11442 MSFTEFYSMIPVLESAKRSEVLDESLDLVHMEQVVKEIRHCHHLSDKENPEKKINGVHKCLKPVQEYTHVPGAQSHWTRRKQLLAAHPELKQLIGYDLWSGLWVVGIIAVQIAVGAYLAQIDASMWTILAVSYVFGACLNHGMWVLIHDLTHDLIFPWKSVNTFFHLVANLPLIFPSTISFRHYHRLHHSYLNETYNDPDMPGPFEARLFGTTPIGKASWMFLFPIIQSLRVVRYQTRMDFLTVANWAIQIAFIGAVVHFFQWKALAYMTISSFFAIGFHPLGARWIAEHYAVHPDQETYSYYGSANSIAFNIGYHNEHHDLPLVPWSKLPLITKAAPELYKTLHCHWSYTKLLMWFILDKNFTLKTRVIHPSYSKLCDETILSKRPAREPVVDQVKMEEKMD* # ORIGINAL: g11440.t1 original gene structure, not modified by PASA NODE_326_length_26884_cov_37.5291 AUGUSTUS gene 17273 19743 . - . ID=g11440;Name=g11440.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS mRNA 17273 19743 . - . ID=g11440.t1;Parent=g11440;Name=g11440.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 18691 19743 . - . ID=g11440.t1.exon1;Parent=g11440.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 18691 19743 . - 0 ID=cds.g11440.t1;Parent=g11440.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 17273 18295 . - . ID=g11440.t1.exon2;Parent=g11440.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 17273 18295 . - 0 ID=cds.g11440.t1;Parent=g11440.t1 #PROT g11440.t1 g11440 MTIASSVAKGMVGAAVRSVFNFRRFALQQSGDGLHACTDAVAFGAYLTRDVFLRRAGRPPALMTPNDLDVCILRPGFESEQDARPVDWVPRTVLDIGTGTGVLSLMVAQRLFEENSPGYCAVATEAVRMRENGRGSIVHAIEPNDEAFDCARANIAASPWSSRMEVFKTPFQYFWRTRFGLRFPPQSGHFGEVRPRSSAWARMRSYDMNSCKPMPQELLRLAEEFEAQEATRERPLVSMEGIGTTRVQHYDLIVCNPPFNDLAPTAKHSLTKEMAVIRSFLPLGELLEGTLRLLSVNGQFWVLLPDILSDYFVQIARQRDLRLVHRTRLRFQETKAFQRSMLCFVKSPFPKPPFVRNPTRPMDTPLQYERELRREPSWYPKCMSTPLTGAIQLGEWLYMQTQHDSNRAALAIDALVDGRCEPEDKPTDGLIWKHPTDAVMRSPSPMPASDVAGSNPRRLEDFQPLPYVAIGNPVYELPSFAKVKLPKAPLGIPTISSSATPVYSPMPSVTQMLRSALPKEVIVDRPIVLSNTMLEYSSRGNRPPRRHNIKDRTLDRRAREDDATDPPEMTLTPRELAEMWWRPGYVRAVVEQARMKRLQTDAADPRLEIVWPPSRELVTVMGPDERLSARFLRMCAQFYRLDLMRSKLLPAAVLGLDGSNAFVPNGSDNASDGAKGVRGADGQGGMPDSSS* # PASA_UPDATE: g11439.t1, single gene model update, valid-1, status:[pasa:asmbl_5808,status:12],[pasa:asmbl_5809,status:12], valid-1 NODE_326_length_26884_cov_37.5291 . gene 10370 16839 . + . ID=g11439;Name=g11439.t1 NODE_326_length_26884_cov_37.5291 . mRNA 10370 16839 . + . ID=g11439.t1;Parent=g11439;Name=g11439.t1 NODE_326_length_26884_cov_37.5291 . five_prime_UTR 10370 10505 . + . ID=g11439.t1.utr5p1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 10370 10695 . + . ID=g11439.t1.exon1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 10506 10695 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 11182 11574 . + . ID=g11439.t1.exon2;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 11182 11574 . + 2 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 11917 12041 . + . ID=g11439.t1.exon3;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 11917 12041 . + 2 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 12376 12486 . + . ID=g11439.t1.exon4;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 12376 12486 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 12776 12859 . + . ID=g11439.t1.exon5;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 12776 12859 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 13358 13420 . + . ID=g11439.t1.exon6;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 13358 13420 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 13555 13602 . + . ID=g11439.t1.exon7;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 13555 13602 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 13832 14055 . + . ID=g11439.t1.exon8;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 13832 14055 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 14345 14432 . + . ID=g11439.t1.exon9;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 14345 14432 . + 1 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 14693 14782 . + . ID=g11439.t1.exon10;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 14693 14782 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 15121 15162 . + . ID=g11439.t1.exon11;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 15121 15162 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 15335 15397 . + . ID=g11439.t1.exon12;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 15335 15397 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 15517 15654 . + . ID=g11439.t1.exon13;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 15517 15654 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 15984 16134 . + . ID=g11439.t1.exon14;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 15984 16134 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 16315 16427 . + . ID=g11439.t1.exon15;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 16315 16427 . + 2 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . exon 16631 16839 . + . ID=g11439.t1.exon16;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . CDS 16631 16711 . + 0 ID=cds.g11439.t1;Parent=g11439.t1 NODE_326_length_26884_cov_37.5291 . three_prime_UTR 16712 16839 . + . ID=g11439.t1.utr3p1;Parent=g11439.t1 #PROT g11439.t1 g11439 MLSSYAAMLRTLRIRVVNVKQFRFASIVVRDATYVNIAATYAYPWDYAMASTDATRAIMPVRQQMDYSLVAIYDDGTVPNMYNGMSIQVVLTGASGFTTPVAVNLANQLFLANGILTFTMNTLVDGVTVQRSAFAHPAMDDVTTLSISCRQKADCLKVDTFWPKKLILSYAEGTWEFPFTPANMTQNQVYSLTTMADIAVLMDVEDGTDFPVTIEVIGRNGATTGAITLGKSISDDLKAVINAPPVGDISYVILSKPTGDDYFQINGMTLKRVGYPDVTMYGDGMLVGITTNDEPNARPQQDLVLTGNPTLSVMDPTQLANKVIMMKGFLTKQGGSVKSWKRRWFVLGKGGNMETLLYYKDEREKELMGDISLTSCEGPGAVSMGVLDRYATRFPFQIRTGTRTYHLTADSPKELDAWLSALRDTLTILMVLNKLKKPEDPAGTLSVPETDGNASHTEDEGEPERGHSHVIEPAVVRLTDEEAAKVTWALKGHLYKRGGGHSVGLSKAWKKRWFVLRDVQFPKEVMEILYTNKYIKSRIYDLFGLLFYYRNEKEKELMGVIDLAECTRILEHKDGKPGAYGFDLHTPDRVYELAAETEADRKDWIHTLSLVGRNANLHRERHDHLARDEKNATPTDAVYAQDAATQAPVDIAVFAQEAKHTDDEMED* # ORIGINAL: g11438.t1 original gene structure, not modified by PASA NODE_326_length_26884_cov_37.5291 AUGUSTUS gene 5897 9059 . - . ID=g11438;Name=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS mRNA 5897 9059 . - . ID=g11438.t1;Parent=g11438;Name=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 9022 9059 . - . ID=g11438.t1.exon1;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 9022 9059 . - 0 ID=cds.g11438.t1;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 7838 8890 . - . ID=g11438.t1.exon2;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 7838 8890 . - 1 ID=cds.g11438.t1;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 7058 7247 . - . ID=g11438.t1.exon3;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 7058 7247 . - 1 ID=cds.g11438.t1;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 6788 6894 . - . ID=g11438.t1.exon4;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 6788 6894 . - 0 ID=cds.g11438.t1;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS exon 5897 6521 . - . ID=g11438.t1.exon5;Parent=g11438.t1 NODE_326_length_26884_cov_37.5291 AUGUSTUS CDS 5897 6521 . - 1 ID=cds.g11438.t1;Parent=g11438.t1 #PROT g11438.t1 g11438 MRVWYAVVGPQRREIACVRYKDGDTLHDIKRRILKEERISASPSSYTVVVPSPTNGDDKESVPFSAQHFAADAATAFPNIGANTLLDPTCTRALPSHLLVRESGLLTTNSHDFPLYIIPIDTPVKSVDVHSTATYQSCGDGSVDVQSHVDAADARKSECTPPSSSENERRDGEVAEKARSRDHHERQGQQQEQHQQEQHCYESQQRQRMEQHVRRHGGDSRINKILNPHGVRVTEDDVTPNGPASEFADSVSSTATATNSSVRRQCMTTDACARATIATQRPTARTATEVDRMRGWAEDMDSRLELDIPSGHAVSVLGRIADSLVWWTCLRYMDESSKLMFALTCDDARVLAMRFERVVHKKY*LETDVARPEDPIDSLLPSRLHCVLAATVSLRLPLAEVALPLATATRMSDYDVWVWMCIAGCAKASAIHFVVHGNITTHICVDPERRQLIASAMRNPHVRTVTVAVDSGRVPDADTSTIIEMALSHMASLSDEIYGAAHHCLSRDSPRNAIASSHIAHGVDGAVDSRPWRWCLASTCPRHVTFTLMPIDTHQDGCTRDDDAQTMCGQNNGGRNYFGGFGRGPIAPSVASGPSLSRPYHDGQHGPPPVPARPHNDGVSGGGMYERRRDVSARDGRGRPRDRNTFPTDIALQNFFDAMAYARTSGTDSF* # PASA_UPDATE: g11437.t1, single gene model update, valid-1, status:[pasa:asmbl_5806,status:12],[pasa:asmbl_5807,status:12], valid-1 NODE_326_length_26884_cov_37.5291 . gene 498 5498 . + . ID=g11437;Name=g11437.t1 NODE_326_length_26884_cov_37.5291 . mRNA 498 5498 . + . ID=g11437.t1;Parent=g11437;Name=g11437.t1 NODE_326_length_26884_cov_37.5291 . five_prime_UTR 498 596 . + . ID=g11437.t1.utr5p1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 498 734 . + . ID=g11437.t1.exon1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 597 734 . + 0 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 831 1080 . + . ID=g11437.t1.exon2;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 831 1080 . + 0 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 1329 2468 . + . ID=g11437.t1.exon3;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 1329 2468 . + 2 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 2840 3038 . + . ID=g11437.t1.exon4;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 2840 3038 . + 2 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 3428 3638 . + . ID=g11437.t1.exon5;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 3428 3638 . + 1 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 3997 4097 . + . ID=g11437.t1.exon6;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 3997 4097 . + 0 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 4431 4558 . + . ID=g11437.t1.exon7;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 4431 4558 . + 1 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 4859 4926 . + . ID=g11437.t1.exon8;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 4859 4926 . + 2 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . exon 5077 5498 . + . ID=g11437.t1.exon9;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . CDS 5077 5295 . + 0 ID=cds.g11437.t1;Parent=g11437.t1 NODE_326_length_26884_cov_37.5291 . three_prime_UTR 5296 5498 . + . ID=g11437.t1.utr3p1;Parent=g11437.t1 #PROT g11437.t1 g11437 MIDSLNDFSVRQVCNNGSYTITGVGQRISISLFEPIGSVSWAFEANVDCGWGGYVIVDGNRSSPAKVDTSDVTIGSGKLNFNATLQRGWHLIEFVCLEDERGSTGQSLYFRRGTDAKVVVQQDNLRNAARSAFRIASTSANDFAKAESASSVAYATSLAVASSIEVIRSASAAASSYAYQASVASIASAASAIVEASRASAVSLIAASASLESARVEGLASVSSASVNVVRASAASLESARVEGLASVSSASVNVVRASAASLESARVEGLASVSSASVNVVRASAASLESARVGKASASIASVNAARSSVASKASMTSSQTAFPETPDPTTSRNIPSPTRTYESPNKGDSSPIIIPGVGTVESSSGGGSSPAVIAGAVVGVVILAAVVATAACFVIWRRQTTPYRLGFVKRNRSNGKELSGDDGHALNYVSGTRFGGENDQIRVIINPHAREAGTHLSGALYDGANSLRSVNGAALLALQQGPAHVNLADQRRVVYESIDDVDVADVLGVKVIQRPLLLVGEMLGSGNFAEVRVGSLLSTVRGEAAVPVAIKALKTDSTDAHKSLLLEEASLMNRMRHPNVVGVVGIIVDSLGPVMVIMDLMEEGSLVDYLTKGRDILKRTTLAAICRDVAAGMTLLEQNGMVHRDLAARNVLVSKDGRAKIADFGLARQMEHDYYITRGGAIPVKWTAIEACMFKRYSTASDVWSFGVLCWEVFSLGCKPYENMTNREVLDFIEQGGRLEQPEMANDRIFAVMKQCWQVAPKNRPTFIALFAKMQAEATISARHSRPGTEGTGDSGYAELEPEDAYKTYLRMPNA* # PASA_UPDATE: g5456.t1, single gene model update, valid-1, status:[pasa:asmbl_5567,status:12], valid-1 NODE_3102_length_4316_cov_33.2183 . gene 1 1896 . - . ID=g5456;Name=g5456.t1 NODE_3102_length_4316_cov_33.2183 . mRNA 1 1896 . - . ID=g5456.t1;Parent=g5456;Name=g5456.t1 NODE_3102_length_4316_cov_33.2183 . exon 1022 1896 . - . ID=g5456.t1.exon1;Parent=g5456.t1 NODE_3102_length_4316_cov_33.2183 . CDS 1022 1896 . - 0 ID=cds.g5456.t1;Parent=g5456.t1 NODE_3102_length_4316_cov_33.2183 . exon 751 852 . - . ID=g5456.t1.exon2;Parent=g5456.t1 NODE_3102_length_4316_cov_33.2183 . CDS 751 852 . - 1 ID=cds.g5456.t1;Parent=g5456.t1 NODE_3102_length_4316_cov_33.2183 . exon 1 631 . - . ID=g5456.t1.exon3;Parent=g5456.t1 NODE_3102_length_4316_cov_33.2183 . CDS 1 631 . - 1 ID=cds.g5456.t1;Parent=g5456.t1;3_prime_partial=true #PROT g5456.t1 g5456 MADAFDPEDDAIFGDDTDAIGLLDMRNGRTRDSVRESLGANRKSRGCCCGLGLTFVSVAIALVIGLGAGTGLGVILLNVKCAQMANGNGTVASTAFERMGVATLPPTPLCDPVWATAVAAAHTAQQTVLVTVTHTEVMTAPAHLLTVTVSAAYATTVTQAVSLVHTVTATATVTQSPRVVTVDSAHTVTQVVQATCEPVTVPRVATVHASASCPPAVPNTITHTVTLNAPGPTVTVSASPATPSCGNGVGTSGDAIGRGSAWADMQAEVAAVSFRSTFSDSVNASNIRELLREYTRRPHLAGTPSDIATAVYTRQLLEDAGFEDITMDMYSVLLSYPSVMAENSVSFIQLKENNTETWRAHATEDGLPIDGDHNDEAVPPYIAFSPSGNVTSTCLVYVNFCTESNFASLLTRLSPTLPTLDGCVALCRYGSSFRGNKVSVAEQHNISAVLMFSDPEDVVRDGDAVYPDGVSLGPDGVQRSSLYMAWGDPQTPFYPARPGVYRTPIDSPDVAAVLPRIPAHPLSYRDAAVLLDQMGG # ORIGINAL: g5457.t1 original gene structure, not modified by PASA NODE_3102_length_4316_cov_33.2183 AUGUSTUS gene 2804 4222 . + . ID=g5457;Name=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS mRNA 2804 4222 . + . ID=g5457.t1;Parent=g5457;Name=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS exon 2804 2948 . + . ID=g5457.t1.exon1;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS CDS 2804 2948 . + 0 ID=cds.g5457.t1;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS exon 3137 3259 . + . ID=g5457.t1.exon2;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS CDS 3137 3259 . + 2 ID=cds.g5457.t1;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS exon 3428 3538 . + . ID=g5457.t1.exon3;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS CDS 3428 3538 . + 2 ID=cds.g5457.t1;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS exon 3809 3947 . + . ID=g5457.t1.exon4;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS CDS 3809 3947 . + 2 ID=cds.g5457.t1;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS exon 4140 4222 . + . ID=g5457.t1.exon5;Parent=g5457.t1 NODE_3102_length_4316_cov_33.2183 AUGUSTUS CDS 4140 4222 . + 1 ID=cds.g5457.t1;Parent=g5457.t1 #PROT g5457.t1 g5457 MDIVGTFSTVAAVYLAFKALRVALSFSSAVYTAFLRPAKNLKKLGEWAVVTGSTDGIGLSYAKELGRKGFKIVLVSRTEDKLKTVAEEIKGKYNVEVKYFAVDFSKGRSVLQPLIDNLKDLDIGILVNNVGVAYEYPEYLASVPEDKMYQLIDVNIVAGTVLTRGLIGKMIERKRGAVVNISSGSGHLPAPLLSIYSASK # ORIGINAL: g7247.t1 original gene structure, not modified by PASA NODE_1099_length_14015_cov_40.7083 AUGUSTUS gene 5393 7980 . + . ID=g7247;Name=g7247.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS mRNA 5393 7980 . + . ID=g7247.t1;Parent=g7247;Name=g7247.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 5393 6769 . + . ID=g7247.t1.exon1;Parent=g7247.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 5393 6769 . + 0 ID=cds.g7247.t1;Parent=g7247.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 6904 7980 . + . ID=g7247.t1.exon2;Parent=g7247.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 6904 7980 . + 0 ID=cds.g7247.t1;Parent=g7247.t1 #PROT g7247.t1 g7247 MPDERRVAYIYGPGEIVETSTRDSYLTTLLRHRRPGVRTFGRVLAALTRAAWLAYLGMFLTSSATVMTVIVLGFPRLGVSRFLIHTAGGKAFVILSCAFVNLHSQCLAAFVSINRVVCQRLFHSFDFWFLLANSVSMIISASIVYRDVRIFCLMLGFSAATVYLFLDSFLVGLRRKNSPLRIVAVLSLYFLIFGLGCGGLIFSFQLTVDVDKDASIPHISAGIFSIDSRTFCMNRIFTLLFYAFKSAYVGTTTWNLKGNVPMLLLRAPLDVYYGSAPHIVDRRVYNGGPNDKLSVSVGNIVDAVDPYVASTIDPAHPSACADGMAATAGGAVQRPCHACESSNKQPDNGAWADIVAARRENAVLSAAPIDCDDRSSPPRESCHACVDTVLSDGCTISSAAVQGRMSVPPEMAQNDCFPRANGIHVPWHMIAPHTCNDKSDAVADAVPMLLEVLSVENAEPHRSQHGGWMEPPVDQSTSSEVTSHMAQPSTTVDSLTRSQIEKEAQSSRAKWRPAYIVTHAVSREIDIDASIIASATNALRRRVHVLRRCWNGRSSVSPAVPALPQTTADGVHTNDVEAHATCRPADCTGKRLSGTAFAVYSIALMGAMITGTVLSCVLITVDLPDAALPCINVFVSFSAAFIFLSVFRNCTIVTRMLLVSFDFWFFAIQAVAVPVALWWYLPRSHSGSIGTFFLSLCLRTAMIDAAVRERILNRYVCVMYGCALVALVASIQWATLPAVIVSVVGIEIDLRGFVCDRAVILLIFLCRMVAVVAMDANRLVFIFRVVYCCGEAPREVAEDCQGIVGNVVVYRSTQLSS* # ORIGINAL: g7245.t1 original gene structure, not modified by PASA NODE_1099_length_14015_cov_40.7083 AUGUSTUS gene 192 917 . + . ID=g7245;Name=g7245.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS mRNA 192 917 . + . ID=g7245.t1;Parent=g7245;Name=g7245.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 192 382 . + . ID=g7245.t1.exon1;Parent=g7245.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 192 382 . + 0 ID=cds.g7245.t1;Parent=g7245.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 566 917 . + . ID=g7245.t1.exon2;Parent=g7245.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 566 917 . + 1 ID=cds.g7245.t1;Parent=g7245.t1 #PROT g7245.t1 g7245 VSLGLASRELSAAEVQLRASRERLRSHEARIADLVSATANMENANAALKRTLDASSQMASQKERVLRERCESLRSINAALESKVLDLYARLEATQPQTPQQPQDDTTSSTSSEMPSFGASRTSVRDSRSSSSEASQLQSQLQPQSQAQAQSHTAVTGQSQATTTTATQQPSVHPFARALR* # PASA_UPDATE: g7246.t1, single gene model update, valid-1, status:[pasa:asmbl_365,status:3], valid-1 NODE_1099_length_14015_cov_40.7083 . gene 1256 4338 . + . ID=g7246;Name=g7246.t1 NODE_1099_length_14015_cov_40.7083 . mRNA 1256 4338 . + . ID=g7246.t1;Parent=g7246;Name=g7246.t1 NODE_1099_length_14015_cov_40.7083 . five_prime_UTR 1256 1333 . + . ID=g7246.t1.utr5p1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 1256 1566 . + . ID=g7246.t1.exon1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 1334 1566 . + 0 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 1782 1835 . + . ID=g7246.t1.exon2;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 1782 1835 . + 1 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 1990 2003 . + . ID=g7246.t1.exon3;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 1990 2003 . + 1 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 2198 2440 . + . ID=g7246.t1.exon4;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 2198 2440 . + 2 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 2743 3042 . + . ID=g7246.t1.exon5;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 2743 3042 . + 2 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 3280 3809 . + . ID=g7246.t1.exon6;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 3280 3809 . + 2 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . exon 4043 4338 . + . ID=g7246.t1.exon7;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . CDS 4043 4177 . + 0 ID=cds.g7246.t1;Parent=g7246.t1 NODE_1099_length_14015_cov_40.7083 . three_prime_UTR 4178 4338 . + . ID=g7246.t1.utr3p1;Parent=g7246.t1 #PROT g7246.t1 g7246 MSSFRVAVAISAVVVALAASAASRAVGSDPTQITSLPGLSTPLSFSQYSGYITVDESHARQLYYFFAESQNSPAKDPLVLWFNGGPGCSSMGGLAGEHGPFYPNTDGRTLRVNPYSWNRVANMLYVDSPSGVGFSFSGNSSDYTTGDAQTAADAVNFLVGFLARYPDFASNPVYISGESYAGHYVPNLVKAIILSNDAGVNPHINLAGFLVGNPWTDASLDNYGTALSWVARSLNSQPTFDAIAAKCDFSQIGPLKKAAAWRRSVPADECSTAVDTSSKEMGSIDIYDIYTDVCLSQSPKAHMTALLNAIGAEGYEDDAATFARMLASKINGKQQQARRSTENPPEDDACIDNHVQQYFNLPEVKAAIHASSSISWSDCNGVVNYSREDLLTSMLPVYQYLVARSKGTESSPALNLRMLVFSGDVDGIVATTGTRLWIDKLALPVTEAWRPWTASDKQVGGYVTKYDGLTFATVRNAGHMVPWTQPVRALDLFSRFLNNEAI* # ORIGINAL: g7248.t1 original gene structure, not modified by PASA NODE_1099_length_14015_cov_40.7083 AUGUSTUS gene 8571 10151 . + . ID=g7248;Name=g7248.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS mRNA 8571 10151 . + . ID=g7248.t1;Parent=g7248;Name=g7248.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 8571 10151 . + . ID=g7248.t1.exon1;Parent=g7248.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 8571 10151 . + 0 ID=cds.g7248.t1;Parent=g7248.t1 #PROT g7248.t1 g7248 MSSVSSTSFESLPVEVVVEHIGSFLSNADLASLAHVNSTLRCGLSRMRLYTLRHAYAQKFTRASPEFRSTVLAIIPKDRLILNLSSLSEADVSVLSGVHSIDLTRCAGVTDVSAFGGVHSLNLSGCARVTDVSRLGSVYVLNLHGCDRLTDVSALGGVHTLCLSTCSKVTDVSALGGIHTLDLSMCDISDVSALGRVHDLDLSWCQGVKNVSALGGVHSLNLTGCMGVTDVSSLGGVHSLNLSFCPGVKNVSALGAVYSLNLSNCVQIKDVSSLGRVHSLSLDKCGGVTDVSALGGVYSLNLSCCTGLKNVSALGGVHSLDLTCCNGVTDVSALGGVHSLDLTCCEGVTDVSALGGVHSLILTKCVGVKDVSKLGTVRSLNLFECTNVTDVSALGGAHTLNLSHCNIADVSALGGVHSLNLTSCLGVTDVSALGGVHRLNLTHCNGVTDVSALGGVHTLDLNRCNGVRDVSALGGLHRLYLTGCNGVTDVSALGGVHYLDLSYCEGVTDVSMLSGVRALTGVKLKK* # ORIGINAL: g7249.t1 original gene structure, not modified by PASA NODE_1099_length_14015_cov_40.7083 AUGUSTUS gene 11172 12412 . - . ID=g7249;Name=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS mRNA 11172 12412 . - . ID=g7249.t1;Parent=g7249;Name=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 12340 12412 . - . ID=g7249.t1.exon1;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 12340 12412 . - 0 ID=cds.g7249.t1;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 11965 12071 . - . ID=g7249.t1.exon2;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 11965 12071 . - 2 ID=cds.g7249.t1;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 11565 11735 . - . ID=g7249.t1.exon3;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 11565 11735 . - 0 ID=cds.g7249.t1;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS exon 11172 11270 . - . ID=g7249.t1.exon4;Parent=g7249.t1 NODE_1099_length_14015_cov_40.7083 AUGUSTUS CDS 11172 11270 . - 0 ID=cds.g7249.t1;Parent=g7249.t1 #PROT g7249.t1 g7249 MVIMYFDAEGTCSDRPLHYFTADICRDPPYEIPVIDDIASGNFLYYYHGSYETECHVHVQHFNPMHGLMRIPFTNIRVPFVAIALEASWEKVESADHIARFGNKAYLTFRGKKIPNSIVSSLTDIVIMTLSDWSILYCCAAILGLSVLS* # ORIGINAL: g633.t1 original gene structure, not modified by PASA NODE_3836_length_2651_cov_32.073 AUGUSTUS gene 85 2540 . + . ID=g633;Name=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS mRNA 85 2540 . + . ID=g633.t1;Parent=g633;Name=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 85 177 . + . ID=g633.t1.exon1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 85 177 . + 2 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 357 549 . + . ID=g633.t1.exon2;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 357 549 . + 2 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 802 928 . + . ID=g633.t1.exon3;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 802 928 . + 1 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 1235 1412 . + . ID=g633.t1.exon4;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 1235 1412 . + 0 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 1602 1674 . + . ID=g633.t1.exon5;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 1602 1674 . + 2 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 1802 1968 . + . ID=g633.t1.exon6;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 1802 1968 . + 1 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 2189 2227 . + . ID=g633.t1.exon7;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 2189 2227 . + 2 ID=cds.g633.t1;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS exon 2434 2540 . + . ID=g633.t1.exon8;Parent=g633.t1 NODE_3836_length_2651_cov_32.073 AUGUSTUS CDS 2434 2540 . + 2 ID=cds.g633.t1;Parent=g633.t1 #PROT g633.t1 g633 LPDLKYIVQYTGKVTEAGEGLLDWNQFLGLGASVADSAFEARCSALEPSNCAIIIYTSGTTGDPKAVMLSHDNMTWMAHVVGGSIEMNKDDHLISFLPLSHVAAQMTDLVAPIVFGCCVHFAAPDALKGSLGETLRDPLIFRVVAHSCRMTLDSASLSVALLCVLTVFLGVPRVWEKIAEQMQLASAHRSEFAQKIAKWAKKKGLQANTQQDGKQQKPKGWWLANKLVFEKVRAALGLDRCRASFSGAAPISNETLLYFLSLNIPVYEVYGETESTGVITISVHTDFRTGSCGKPPNGIEMRINNPDSDGNGEVSFRGRNTMMG* # PASA_UPDATE: g14435.t1, single gene model update, valid-1, status:[pasa:asmbl_7148,status:12], valid-1 NODE_4258_length_1921_cov_32.6132 . gene 272 1850 . + . ID=g14435;Name=g14435.t1 NODE_4258_length_1921_cov_32.6132 . mRNA 272 1850 . + . ID=g14435.t1;Parent=g14435;Name=g14435.t1 NODE_4258_length_1921_cov_32.6132 . exon 272 434 . + . ID=g14435.t1.exon1;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . CDS 272 434 . + 0 ID=cds.g14435.t1;Parent=g14435.t1;5_prime_partial=true NODE_4258_length_1921_cov_32.6132 . exon 577 611 . + . ID=g14435.t1.exon2;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . CDS 577 611 . + 2 ID=cds.g14435.t1;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . exon 924 1091 . + . ID=g14435.t1.exon3;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . CDS 924 1091 . + 0 ID=cds.g14435.t1;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . exon 1504 1850 . + . ID=g14435.t1.exon4;Parent=g14435.t1 NODE_4258_length_1921_cov_32.6132 . CDS 1504 1850 . + 0 ID=cds.g14435.t1;Parent=g14435.t1;3_prime_partial=true #PROT g14435.t1 g14435 RTASRAAWRTFFRTRGGFSSIGCSATHSQPTRPRDSRTCNRRQSVTTGDSRARTASLMDAGFLRLRISDSNHFVWRAPLKPARMRTNFGRISQSCTLHPNICVTRIRQTLGADRQRETYTAMPWFFRRSSPARHHLPSSRKMPRKSPSALSQRASALPSHPRRPTDCSTSSCVCGRKILRNAPHSRASSQRYGRSIPTRAPPSWTRCSKCLRRIRRTLRRWCRSARTSLMTRRRRRN # ORIGINAL: g12265.t1 original gene structure, not modified by PASA NODE_3306_length_3783_cov_21.6944 AUGUSTUS gene 192 1815 . + . ID=g12265;Name=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS mRNA 192 1815 . + . ID=g12265.t1;Parent=g12265;Name=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS exon 192 269 . + . ID=g12265.t1.exon1;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS CDS 192 269 . + 0 ID=cds.g12265.t1;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS exon 663 749 . + . ID=g12265.t1.exon2;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS CDS 663 749 . + 0 ID=cds.g12265.t1;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS exon 1035 1127 . + . ID=g12265.t1.exon3;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS CDS 1035 1127 . + 0 ID=cds.g12265.t1;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS exon 1281 1382 . + . ID=g12265.t1.exon4;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS CDS 1281 1382 . + 0 ID=cds.g12265.t1;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS exon 1708 1815 . + . ID=g12265.t1.exon5;Parent=g12265.t1 NODE_3306_length_3783_cov_21.6944 AUGUSTUS CDS 1708 1815 . + 0 ID=cds.g12265.t1;Parent=g12265.t1 #PROT g12265.t1 g12265 ELNSFFTEQRTLERMKEFLFSISTLRVEPDNQPRPGRSFSISYGPRDPRNPPEEQQTGPGPQRRKPVVIDVGREVAAVFHRLLKFKDNLVNRVYDGDHAAQRAIDKLISLLDQITAAELDVIAKHKAEDEQLAQEAGLKSSLSRTASGVSTATLE* # PASA_UPDATE: g6506.t1, single gene model update, valid-1, status:[pasa:asmbl_6494,status:12],[pasa:asmbl_6495,status:12], valid-1 NODE_3752_length_2828_cov_34.9913 . gene 742 2614 . - . ID=g6506;Name=g6506.t1 NODE_3752_length_2828_cov_34.9913 . mRNA 742 2614 . - . ID=g6506.t1;Parent=g6506;Name=g6506.t1 NODE_3752_length_2828_cov_34.9913 . five_prime_UTR 2544 2614 . - . ID=g6506.t1.utr5p1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . exon 2459 2614 . - . ID=g6506.t1.exon1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . CDS 2459 2543 . - 0 ID=cds.g6506.t1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . exon 1923 2016 . - . ID=g6506.t1.exon2;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . CDS 1923 2016 . - 2 ID=cds.g6506.t1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . exon 1357 1490 . - . ID=g6506.t1.exon3;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . CDS 1357 1490 . - 1 ID=cds.g6506.t1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . exon 742 1200 . - . ID=g6506.t1.exon4;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . CDS 953 1200 . - 2 ID=cds.g6506.t1;Parent=g6506.t1 NODE_3752_length_2828_cov_34.9913 . three_prime_UTR 742 952 . - . ID=g6506.t1.utr3p1;Parent=g6506.t1 #PROT g6506.t1 g6506 MSTLGSGDVKAAVKLPPGENLNEWLAVNTLDFYNQINMLFGGLREHCTSESCPVMSAGEKYEYYWADGESVKKPIKLTAPDYIDTLLTWIQTNLDNEEMFPIGDGVPFPANFDEMIKTIFKRLFRVYAHIYYTHYKAIEKQSEEKHLNSCFKHFILFVEEFSLIDKKELAPLASIISKLNLPSPAE* # ORIGINAL: g3492.t1 original gene structure, not modified by PASA NODE_2925_length_4727_cov_36.3699 AUGUSTUS gene 2828 4596 . - . ID=g3492;Name=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS mRNA 2828 4596 . - . ID=g3492.t1;Parent=g3492;Name=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS exon 4432 4596 . - . ID=g3492.t1.exon1;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS CDS 4432 4596 . - 0 ID=cds.g3492.t1;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS exon 3943 4041 . - . ID=g3492.t1.exon2;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS CDS 3943 4041 . - 0 ID=cds.g3492.t1;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS exon 3487 3720 . - . ID=g3492.t1.exon3;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS CDS 3487 3720 . - 0 ID=cds.g3492.t1;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS exon 3189 3300 . - . ID=g3492.t1.exon4;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS CDS 3189 3300 . - 0 ID=cds.g3492.t1;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS exon 2828 2874 . - . ID=g3492.t1.exon5;Parent=g3492.t1 NODE_2925_length_4727_cov_36.3699 AUGUSTUS CDS 2828 2874 . - 2 ID=cds.g3492.t1;Parent=g3492.t1 #PROT g3492.t1 g3492 MFAQILSDVPYNVLQVAVWTVIIYFSVDLRHGAGHYFTFVVFIYVILETAVGMAQCFAAIAKDFEGASVMSFPFVLISFLFSGFYLRRPLIPDYWIWAFYTSYLQYGINGVVMNQFEGDFTYTKRTPCFACVPAPTNAAVACGSKFASQTNNTWYCCTPSNLETVETWEPDKLLSVWGYGPEAAIDSLWPNLAVLGAFWAMWWTATYLGLRYKKHGTR* # PASA_UPDATE: g3491.t1, single gene model update, valid-1, status:[pasa:asmbl_5246,status:12], valid-1 NODE_2925_length_4727_cov_36.3699 . gene 166 2327 . + . ID=g3491;Name=g3491.t1 NODE_2925_length_4727_cov_36.3699 . mRNA 166 2327 . + . ID=g3491.t1;Parent=g3491;Name=g3491.t1 NODE_2925_length_4727_cov_36.3699 . five_prime_UTR 166 166 . + . ID=g3491.t1.utr5p1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . exon 166 241 . + . ID=g3491.t1.exon1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . CDS 167 241 . + 0 ID=cds.g3491.t1;Parent=g3491.t1;5_prime_partial=true NODE_2925_length_4727_cov_36.3699 . exon 719 879 . + . ID=g3491.t1.exon2;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . CDS 719 879 . + 0 ID=cds.g3491.t1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . exon 992 1150 . + . ID=g3491.t1.exon3;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . CDS 992 1150 . + 1 ID=cds.g3491.t1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . exon 1580 1690 . + . ID=g3491.t1.exon4;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . CDS 1580 1690 . + 1 ID=cds.g3491.t1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . exon 1970 2327 . + . ID=g3491.t1.exon5;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . CDS 1970 2030 . + 1 ID=cds.g3491.t1;Parent=g3491.t1 NODE_2925_length_4727_cov_36.3699 . three_prime_UTR 2031 2327 . + . ID=g3491.t1.utr3p1;Parent=g3491.t1 #PROT g3491.t1 g3491 RFLVDDFTISSDSKIERLTDNKRQELAEAQLMFEKYDKDQSGTITFDEFKGLCYDLGVFLSDEELHVAMKLIDNSGDEELSVDEFSAWWTASGNDKFAKFKLGEDERQGLRQATAYFQYFDTERKGFLSRENFVELHADLTRHGMVNTSTDECLKVLDANNDGKITFAEYVDWLVKLGSLCLAGYAQS* # PASA_UPDATE: g8156.t1, single gene model update, valid-1, status:[pasa:asmbl_7869,status:12], valid-1 NODE_5106_length_1017_cov_42.7314 . gene 2 1017 . + . ID=g8156;Name=g8156.t1 NODE_5106_length_1017_cov_42.7314 . mRNA 2 1017 . + . ID=g8156.t1;Parent=g8156;Name=g8156.t1 NODE_5106_length_1017_cov_42.7314 . exon 2 1017 . + . ID=g8156.t1.exon1;Parent=g8156.t1 NODE_5106_length_1017_cov_42.7314 . CDS 2 1017 . + 0 ID=cds.g8156.t1;Parent=g8156.t1;5_prime_partial=true;3_prime_partial=true #PROT g8156.t1 g8156 VGFAVSDGDFISESVYSFVTISYVNDEPVLSLDVAPTPFGQIDYVEASGAHLLAPLLTIGDVDDDNLKSAVITISPIPDGTEEVLDVDADFGISKNLHRSDTTSMTLTLTGVSSVTHYRDVLRTLTYTNQISGLPTALPRTVLLYAVDDHGDDALPSDDVEVQITFHAVNDPPVVRLGGAALNFTALFTEEGPAVGIVSSILSCTDVDSPNLASATVTLENIPDAGLESLSVDTTGTDLAASYNESSGILSIVGNFSFAQYATVLRSLLYVNTADEPAPEDRVVSVKVNDNHLDSIVGYSSVSIVLVNDAPVLADAGATITFTENDADTAIFTSGLVD # ORIGINAL: g2951.t1 original gene structure, not modified by PASA NODE_17587_length_223_cov_48.9459_potentialcontaminant AUGUSTUS gene 2 223 . + . ID=g2951;Name=g2951.t1 NODE_17587_length_223_cov_48.9459_potentialcontaminant AUGUSTUS mRNA 2 223 . + . ID=g2951.t1;Parent=g2951;Name=g2951.t1 NODE_17587_length_223_cov_48.9459_potentialcontaminant AUGUSTUS exon 2 223 . + . ID=g2951.t1.exon1;Parent=g2951.t1 NODE_17587_length_223_cov_48.9459_potentialcontaminant AUGUSTUS CDS 2 223 . + 0 ID=cds.g2951.t1;Parent=g2951.t1 #PROT g2951.t1 g2951 LLRGAAISMQRRFRATAAMRKEMAAYKKTVASIVVLQSLVRGRIAHKAFVAQKAAAITIQSAFRAHIARSAYAL # PASA_UPDATE: g8514.t1, single gene model update, valid-1, status:[pasa:asmbl_2323,status:12], valid-1 NODE_1685_length_9751_cov_40.316 . gene 2533 7302 . - . ID=g8514;Name=g8514.t1 NODE_1685_length_9751_cov_40.316 . mRNA 2533 7302 . - . ID=g8514.t1;Parent=g8514;Name=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 7234 7302 . - . ID=g8514.t1.exon1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 7234 7302 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 7051 7136 . - . ID=g8514.t1.exon2;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 7051 7136 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 6838 6891 . - . ID=g8514.t1.exon3;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 6838 6891 . - 1 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 4217 6462 . - . ID=g8514.t1.exon4;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 4217 6462 . - 1 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 3887 3957 . - . ID=g8514.t1.exon5;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 3887 3957 . - 2 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 3540 3707 . - . ID=g8514.t1.exon6;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 3540 3707 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 3136 3255 . - . ID=g8514.t1.exon7;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 3136 3255 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 2914 2967 . - . ID=g8514.t1.exon8;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 2914 2967 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . exon 2533 2746 . - . ID=g8514.t1.exon9;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . CDS 2720 2746 . - 0 ID=cds.g8514.t1;Parent=g8514.t1 NODE_1685_length_9751_cov_40.316 . three_prime_UTR 2533 2719 . - . ID=g8514.t1.utr3p1;Parent=g8514.t1 #PROT g8514.t1 g8514 MEDLERAIAVCFDPTANPVFKAQATEYCDQLKLSPDGWRLCIQRFADGTVSAPIVRFFCLQVIEECVRSRYDALAESDQRLLRETWTAWIRECRASTQPAYIRNKFAQVLVLLLVRDFPSRWPNVFSDLIRSLPAGGPPAIDLFLRILHALSEDVISRDVGRSAAELVRATEIKDSMRAMCVEDLAGTWVQIIAACSRTQPELAAMCLRVVGAYVSWIDIGLVVNERMVTLVFDALGQQELRDAAAECIMDIVMKGMDLAAKTRLVESLGLAPLLSSAFDVAVAEDDDEFAVRLAKIVNVIGLELVETLTREAPEDVRARASEMLEGQYVPLLVRAMGNDTDDVAEAVMDFATAYVKLLKSSRNNLSADGHCFRALIAVIVHKMRYTVDHNFDDETGDDKLFADFRSSLRGLLMPIAQINAPLVLSFVSDVVLRSLGNALRLEFNDVEVALFLLYAIAEVVNAGSPLTDLGIQPPSPLRLMVEAMVVSDVASHPHFIVGLQYFECVIRYSKFFEVCPEHIPRVLATFLDRRGISHPNATVRARAAYMFMRFSKQFRSQLAPSLDQIISAVGPAFAVVPGEHEDGRMGMSMEERGSLVEAVGLIVGSDAMPPAEQQRIMSSITAPLLEEYQTIIDGQLVATDTDLRPTYATALADIVTVVMRLSKGYPSLTSMRNAGVGSIFTRAMEVFSRGMSVVAGREVVHSAIRQYLQRLIAVVGEQVLPLVAPVAAGLLTGFSSKDIAEFVPVVVQLITMFKGKVAGFVNEAIAVLVPCVFRQLSAKYDATDSEVVRDRQQLRKTFFQLLHVVVLHDVAQVLTTEANAPHLNSVLMMVVESAETDEDTQTQKLSFGILRRLVELWAGDASTVAGFRGFVYDHVMRACFNAPFRPQFDLKDAQTQMTFSELAATQKAIFDKCGVEYTQYLENVFFPSLRMTPDVARAYIVAMAADVKTFKKFLQAFVEQSKR* # ORIGINAL: g8513.t1 original gene structure, not modified by PASA NODE_1685_length_9751_cov_40.316 AUGUSTUS gene 24 2261 . + . ID=g8513;Name=g8513.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS mRNA 24 2261 . + . ID=g8513.t1;Parent=g8513;Name=g8513.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS exon 24 1518 . + . ID=g8513.t1.exon1;Parent=g8513.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS CDS 24 1518 . + 0 ID=cds.g8513.t1;Parent=g8513.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS exon 1666 2261 . + . ID=g8513.t1.exon2;Parent=g8513.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS CDS 1666 2261 . + 2 ID=cds.g8513.t1;Parent=g8513.t1 #PROT g8513.t1 g8513 MLSETSVVERSKHMRETYAAVVVQRAFRKYLERRRGWHKKADPESPQVNGNGKAAGKKKGKKKKTKRKPQQHQQQQQQHQQQQQQSQLQQLPGGTEGVVGERENNAAATDIAVTPNDGDNDSDDAFNADALAPCGPDPIVLTDASEGWALRPPPTVTATTTISSTISTTRTEPSMDAEFAGESSLEPSQIDRVCKANENASPPTFRSASSYGGMAMSAAVAWVESSPNDSSTAHVMRDDALTLDSQTTQSRDARVGGLAFASVPPATTNVEATAVSPKVTVIGDDDGFGDFEAFAGVPAAIPESPAAAAVEWNAWGEGHAPVVGSQSAAPPPPEIGWVAWESQQSSPPSQSHERHEASVQSGTEPVVYAAVRESTTDDLHPQSARVGTSAVISAPLDQNDNSSEIRSADFAKDSSTNETRGTTDAQNEMGDGQSRVPSLGGDDESQQRKESTVSLLSVDLPRVPFVMTPELEALRLKLLAMTAGELTGFEVQLRARMKDVSRQLVVALEDRDDLDFERDMLRRRTAMIAKSYVQTGPIHSSDTHRPQLQLQSQRHTTPPKGQKGNKRISPGSGDQSASRARGHTISGRAPRRIDEEFMRAAASVLFEPETTDESAGASRDTLCDDDSDLDAGDLGSGHFRLLVGPASDGVESLGRSVEDLSAGASRELVAPTHKQQPAPPPAPKKSGGIFAMFGFY* # ORIGINAL: g8515.t1 original gene structure, not modified by PASA NODE_1685_length_9751_cov_40.316 AUGUSTUS gene 8534 9711 . + . ID=g8515;Name=g8515.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS mRNA 8534 9711 . + . ID=g8515.t1;Parent=g8515;Name=g8515.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS exon 8534 9613 . + . ID=g8515.t1.exon1;Parent=g8515.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS CDS 8534 9613 . + 0 ID=cds.g8515.t1;Parent=g8515.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS exon 9691 9711 . + . ID=g8515.t1.exon2;Parent=g8515.t1 NODE_1685_length_9751_cov_40.316 AUGUSTUS CDS 9691 9711 . + 0 ID=cds.g8515.t1;Parent=g8515.t1 #PROT g8515.t1 g8515 MSDKQRVARDSKYSIAPASPGLDRRGSGLVNFLTLKKKSPSSLSLQTSESAAAAAAQAADAALLQTSLTSTGLSSSSSGSTTASAEGKLTIFLTGCLRLPQKPSSVGRAGGDAAKSRVVYCTLYFQDQRIKTNELTCGPNGDGTWATSIYFCVPPSQSSDLQLVVKVFEPDAESGKSEFLGETIVRPKVTDGKRTKKEDFPLHNHLPTEEDSRSGADSGQGSLSLEFLYEESGSAQDVMTEEIDGVIQVHVEEGTYKTLAVNTSTTVREIIAVMLVKFFHVTESESSEGNYTLLELASGGGERLMQRNERPLAIKLKSPDVQFHLLRPNRRTSSFSKMSSAALKSHAHARAKHKSLSAFKTIACVS* # PASA_UPDATE: g8154.t1, single gene model update, valid-1, status:[pasa:asmbl_7259,status:12], valid-1 NODE_4371_length_1724_cov_34.997 . gene 242 1500 . + . ID=g8154;Name=g8154.t1 NODE_4371_length_1724_cov_34.997 . mRNA 242 1500 . + . ID=g8154.t1;Parent=g8154;Name=g8154.t1 NODE_4371_length_1724_cov_34.997 . five_prime_UTR 242 242 . + . ID=g8154.t1.utr5p1;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . exon 242 447 . + . ID=g8154.t1.exon1;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . CDS 243 447 . + 0 ID=cds.g8154.t1;Parent=g8154.t1;5_prime_partial=true NODE_4371_length_1724_cov_34.997 . exon 620 820 . + . ID=g8154.t1.exon2;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . CDS 620 820 . + 2 ID=cds.g8154.t1;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . exon 924 1500 . + . ID=g8154.t1.exon3;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . CDS 924 1393 . + 2 ID=cds.g8154.t1;Parent=g8154.t1 NODE_4371_length_1724_cov_34.997 . three_prime_UTR 1394 1500 . + . ID=g8154.t1.utr3p1;Parent=g8154.t1 #PROT g8154.t1 g8154 SQACLPHLKKSRHGHILNISPPINLNPRWFKNHTAYTMAKYGMSFCVLGMAEEFRDDGIAVNALWPQTAIATAAMEMLAGSDAAKVCRTPDIMADAAYLLLCRDPRSITGKFLIDEAVLKQFGGVSNFDSYACVPGTKLLPDFFLDEDTVTAIESIKQLDTTNATHARNARSVLDEAKGAPSASATNDALVAKVTRLISPEAVSKTQGVFMLDVAGHGKYVLDLKNGAGSISKGDGKADVTMTVAPETLDEMLEGTLTPTAAFFKGRVKITGNMALAMKLEKVMLATKSKL* # ORIGINAL: g3352.t1 original gene structure, not modified by PASA NODE_3587_length_3149_cov_39.1818 AUGUSTUS gene 2026 2953 . - . ID=g3352;Name=g3352.t1 NODE_3587_length_3149_cov_39.1818 AUGUSTUS mRNA 2026 2953 . - . ID=g3352.t1;Parent=g3352;Name=g3352.t1 NODE_3587_length_3149_cov_39.1818 AUGUSTUS exon 2026 2953 . - . ID=g3352.t1.exon1;Parent=g3352.t1 NODE_3587_length_3149_cov_39.1818 AUGUSTUS CDS 2026 2953 . - 1 ID=cds.g3352.t1;Parent=g3352.t1 #PROT g3352.t1 g3352 LSSLWIGNNDLIDLPDEIGNLEQLRVLGLTGNRLSSLPPSILNLKNLKATWLAANQRKSMPVFYDEEPEDVAGSSDGELKAKHGISCIYLPQKPDNGDDDDDGDETDSFMDDVLGVGEGTNRSALDDSGARVSSQPPKPLASTATFRDAHGHGSGSTSPVLARRHSIEGEASHTSPEGVHDESKTARTVIIASGVSEAPSSPTARSSPKRPHKSPPRERKGSSGSAAGNGSPSGSAGRHARTGSNVGVADMNGDDLGDGLKVSGDVHHHRKIAALRLGRTDSLELAEERHANAVSAGPGIELTATPSA* # PASA_UPDATE: g3351.t1, single gene model update, valid-1, status:[pasa:asmbl_6249,status:12], valid-1 NODE_3587_length_3149_cov_39.1818 . gene 691 1506 . + . ID=g3351;Name=g3351.t1 NODE_3587_length_3149_cov_39.1818 . mRNA 691 1506 . + . ID=g3351.t1;Parent=g3351;Name=g3351.t1 NODE_3587_length_3149_cov_39.1818 . five_prime_UTR 691 692 . + . ID=g3351.t1.utr5p1;Parent=g3351.t1 NODE_3587_length_3149_cov_39.1818 . exon 691 951 . + . ID=g3351.t1.exon1;Parent=g3351.t1 NODE_3587_length_3149_cov_39.1818 . CDS 693 951 . + 0 ID=cds.g3351.t1;Parent=g3351.t1;5_prime_partial=true NODE_3587_length_3149_cov_39.1818 . exon 1070 1506 . + . ID=g3351.t1.exon2;Parent=g3351.t1 NODE_3587_length_3149_cov_39.1818 . CDS 1070 1413 . + 2 ID=cds.g3351.t1;Parent=g3351.t1 NODE_3587_length_3149_cov_39.1818 . three_prime_UTR 1414 1506 . + . ID=g3351.t1.utr3p1;Parent=g3351.t1 #PROT g3351.t1 g3351 IITQSSRRFTHTRQATGTSKTVNMSVSILTICAVATLLVCQTSANCIFPATPAHTFISCSPRTANGNVSVTGTSCTILCEPGFEFKAVNGTAVSEMTCQATNEWSQINGECVDVTQSQSITSKKTLLESLHPGAIVGLALACVAFATVVAYGVSRVRSRGTLTKSELAADKEMGQVDETDRLKDPLLGGNGKGYGHLYTV* # ORIGINAL: g1630.t1 original gene structure, not modified by PASA NODE_2771_length_5168_cov_43.6299 AUGUSTUS gene 131 1820 . - . ID=g1630;Name=g1630.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS mRNA 131 1820 . - . ID=g1630.t1;Parent=g1630;Name=g1630.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS exon 636 1820 . - . ID=g1630.t1.exon1;Parent=g1630.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS CDS 636 1820 . - 0 ID=cds.g1630.t1;Parent=g1630.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS exon 131 361 . - . ID=g1630.t1.exon2;Parent=g1630.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS CDS 131 361 . - 0 ID=cds.g1630.t1;Parent=g1630.t1 #PROT g1630.t1 g1630 MDGDALASLLAAGMKAISEDFPADSPTNNDATKDTLMGDSEDRGDDDCSGDGVVDGSRSPETKWVDITELLRAESATLGVGELLHSDAFSLLDAMSALELMDPKMDAGMSNVASADTLTTLSEAQASSRVKFTGFTVPELVAIMDHLLACEVTWLRGSSLAQTLFTCWYLHRHPTSIVDDPVLGAYCVGLLKCTESVRSVVMRADIYHEEDFVALVYGFGMCEDILDVRAIGMLQEMEEAITTRLRIASGETGVASEYPPLDADAAVEARYAEALLSRLRFRRTLYSALLNLERPQGKGHPQALKDIESAQLHLAAIAATLSLGVGSGLAGEELATAMGPLGFEPTVNGHLLGPSPPRAILLVDRATSVSEWQDYLLQLTVVANVLESATLAQLQTFFVRFSRQSPNVLALSRLHCTFWQKRMVFGRNAIADIIRSDIRRLTDPPALSEKSPVAQNAVVQELWGELSAKITK # ORIGINAL: g1632.t1 original gene structure, not modified by PASA NODE_2771_length_5168_cov_43.6299 AUGUSTUS gene 4338 5033 . + . ID=g1632;Name=g1632.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS mRNA 4338 5033 . + . ID=g1632.t1;Parent=g1632;Name=g1632.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS exon 4338 4472 . + . ID=g1632.t1.exon1;Parent=g1632.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS CDS 4338 4472 . + 0 ID=cds.g1632.t1;Parent=g1632.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS exon 4671 5033 . + . ID=g1632.t1.exon2;Parent=g1632.t1 NODE_2771_length_5168_cov_43.6299 AUGUSTUS CDS 4671 5033 . + 0 ID=cds.g1632.t1;Parent=g1632.t1 #PROT g1632.t1 g1632 MASPLRMRITRRLCDVFADIPENVLGNVAQVEISYGGFEDEITARAVARILDGGVPDVVALQQQEQMQRANQEQQRLQQLQQQRHQAQELQRQRQQQRQQQQQQQQQQQRQLQQGQSNRSLGSPEEISLDVDVVLLVSSLNPSHVALPKFARANSRQSISLRGCA* # PASA_UPDATE: g1631.t1, single gene model update, valid-1, status:[pasa:asmbl_4977,status:12], valid-1 NODE_2771_length_5168_cov_43.6299 . gene 2321 3442 . + . ID=g1631;Name=g1631.t1 NODE_2771_length_5168_cov_43.6299 . mRNA 2321 3442 . + . ID=g1631.t1;Parent=g1631;Name=g1631.t1 NODE_2771_length_5168_cov_43.6299 . five_prime_UTR 2321 2379 . + . ID=g1631.t1.utr5p1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . exon 2321 2442 . + . ID=g1631.t1.exon1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . CDS 2380 2442 . + 0 ID=cds.g1631.t1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . exon 2618 2757 . + . ID=g1631.t1.exon2;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . CDS 2618 2757 . + 0 ID=cds.g1631.t1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . exon 2950 3085 . + . ID=g1631.t1.exon3;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . CDS 2950 3085 . + 1 ID=cds.g1631.t1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . exon 3297 3442 . + . ID=g1631.t1.exon4;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . CDS 3297 3386 . + 0 ID=cds.g1631.t1;Parent=g1631.t1 NODE_2771_length_5168_cov_43.6299 . three_prime_UTR 3387 3442 . + . ID=g1631.t1.utr3p1;Parent=g1631.t1 #PROT g1631.t1 g1631 MSSGNRLAIISGHLKPNQTASPATMATPQKSPITTHILDTALGRPAANVSLLLESLSGNGEWTKISDGRTNEDGRCPTIMAGRQLERGLYRMTFQTGEYFASLNTAGFYPYVQIVFDIQETTQHYHIPLLLSPYGYSTYRGS* # PASA_UPDATE: g8296.t1, single gene model update, valid-1, status:[pasa:asmbl_6269,status:12],[pasa:asmbl_6273,status:12], valid-1 NODE_359_length_26008_cov_41.4396 . gene 80 6201 . + . ID=g8296;Name=g8296.t1 NODE_359_length_26008_cov_41.4396 . mRNA 80 6201 . + . ID=g8296.t1;Parent=g8296;Name=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 80 402 . + . ID=g8296.t1.exon1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 80 402 . + 0 ID=cds.g8296.t1;Parent=g8296.t1;5_prime_partial=true NODE_359_length_26008_cov_41.4396 . exon 617 715 . + . ID=g8296.t1.exon2;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 617 715 . + 1 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 979 1104 . + . ID=g8296.t1.exon3;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 979 1104 . + 1 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 1405 1468 . + . ID=g8296.t1.exon4;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 1405 1468 . + 1 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 1714 2007 . + . ID=g8296.t1.exon5;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 1714 2007 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 2345 2442 . + . ID=g8296.t1.exon6;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 2345 2442 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 2572 2756 . + . ID=g8296.t1.exon7;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 2572 2756 . + 1 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 3127 3353 . + . ID=g8296.t1.exon8;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 3127 3353 . + 2 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 3726 3824 . + . ID=g8296.t1.exon9;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 3726 3824 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 4110 4238 . + . ID=g8296.t1.exon10;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 4110 4238 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 4503 4802 . + . ID=g8296.t1.exon11;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 4503 4802 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 4928 5059 . + . ID=g8296.t1.exon12;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 4928 5059 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . exon 5243 6201 . + . ID=g8296.t1.exon13;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . CDS 5243 5797 . + 0 ID=cds.g8296.t1;Parent=g8296.t1 NODE_359_length_26008_cov_41.4396 . three_prime_UTR 5798 6201 . + . ID=g8296.t1.utr3p1;Parent=g8296.t1 #PROT g8296.t1 g8296 LRALINIDEDDDAQPSKAAAGKGASDKEKKALEDRERALSSKNAELLAALNKERAAAAEALDRLDQEAADRRSAERALNDARGELALAEATADKLTATNRRLTLEVERLTADLEEGSAEADGAMRQKLTRLQKELDEYKAKYKDESEELLRVSEAKRQAERQLTEARDEAESAKTAAAELKRRLTKAQTEADDLALRVEREESRVAELEKKQKKFDSQLNEVSDRGSDERGLRESLVREKDRLSRQVDELTIENEQLRADIAKEQSDRRRIESELEDAVSGGGVDEKALNDLKRAKRDLERQVADLEEEVGELQSDLSMAQQAKQRVELALAQERKQFAADAETKDEELNEAKYAMTRRQKALEEQVEELETERNVASRAQKDAERTVAELKTTLREREAVVSKLKIALKKARIASGDAPGLTRTSSLSQSSAGASAKDSAAVKGLRAQVEELDDALATAQKARAAAEREREEIREALSDAFRAKADADAKINSLHKQLGELREKIEEDEEEFADLVKRQQNNARQLTRTQEELSAAKEQIEELEEKNRELQHKANDLATKLEDAESGNVSKTQADRLERRAKELEEKIVWEQAERRRIETKLERMEEAVDSAKADTEREAKQTKALQEQIRSLNRKAADLKDEIAGLEAKIALEVRQKNEAVAEAEEATEREEKLKKELVSAKRRIDQISKMSDDDCLDGSEDLLSGDDDTDDDIPTTTRSFASSRAKTATKSSAADDDDSPYEPPSDDDESKLSTRRTMTPAKKKSYLDSDEDKKPPKKSYLDSDEDKKPPKKSYLDDSDEDKKPLARTTYTASSTYKAKSTAADSDSDSPYEPPPEDDDERKDRLTSAKPKPIVKAVVDDDDDSPYEPPAEDE* # PASA_UPDATE: g8299.t1, single gene model update, valid-1, status:[pasa:asmbl_6271,status:12], valid-1 NODE_359_length_26008_cov_41.4396 . gene 17535 18444 . + . ID=g8299;Name=g8299.t1 NODE_359_length_26008_cov_41.4396 . mRNA 17535 18444 . + . ID=g8299.t1;Parent=g8299;Name=g8299.t1 NODE_359_length_26008_cov_41.4396 . exon 17535 18444 . + . ID=g8299.t1.exon1;Parent=g8299.t1 NODE_359_length_26008_cov_41.4396 . CDS 17535 17837 . + 0 ID=cds.g8299.t1;Parent=g8299.t1 NODE_359_length_26008_cov_41.4396 . three_prime_UTR 17838 18444 . + . ID=g8299.t1.utr3p1;Parent=g8299.t1 #PROT g8299.t1 g8299 MSTSTAVVKTNAEKKMSSSTTLLKSKLGSQCMSADATGTPTQARKKPFFQNHNDPMSAYAPDLDPAFADSLIREIDAKLKIGKPTKPSDAAFRHCKKRQY* # PASA_UPDATE: g8298.t1, single gene model update, valid-1, status:[pasa:asmbl_6270,status:12], valid-1 NODE_359_length_26008_cov_41.4396 . gene 11944 17038 . + . ID=g8298;Name=g8298.t1 NODE_359_length_26008_cov_41.4396 . mRNA 11944 17038 . + . ID=g8298.t1;Parent=g8298;Name=g8298.t1 NODE_359_length_26008_cov_41.4396 . five_prime_UTR 11944 12088 . + . ID=g8298.t1.utr5p1;Parent=g8298.t1 NODE_359_length_26008_cov_41.4396 . exon 11944 17038 . + . ID=g8298.t1.exon1;Parent=g8298.t1 NODE_359_length_26008_cov_41.4396 . CDS 12089 17038 . + 0 ID=cds.g8298.t1;Parent=g8298.t1 #PROT g8298.t1 g8298 MGTADNHLRGFSDAASLRSSGSQGTLGGSQDVADTDMHGARSKRDISALLAAAKNGLFGVLFVIIKDSSLSKTWIVIGFLVEFLQLLAFAFNAQGQGFPWSNVQSLWLQRALRPFLFETYVEGYRAVFYVVVGVLLILLVTASSIAYSFSRRRHHALWQLKLLRNLSTILSTVLFMPSVGILASKISCHDMSDCWTGVDVFEKMLAILVGLAFIALALLTTICFSDPDPSSPSALSRPHSRIDLYYVVVRAVLTITFPLVRDRWVTAAIFLAGTASAWFLFVWYQPYYHAAYSSAQASLLSIVTWCGVCLMIALAVDNPTDNQAFIFFALGAPLVPFASLYTMQWRRNRLDAALWNDVLDSPLDLEFKIRLSLMRAGMLFEHPGSPEKDKIAAELNGRFREAGVRRDATALLHIFWSNHLQYGMGNKQLALAELQAAEAHSPRLDEQFFIYRRRKMAEDEMAGGNGDVLQFIAFQTHLARATESDIDSTRAQVRFWEELLKPQPSPAALNKVAKRIGLSIATANKAYKALIRLNPNAPQTLRMYAGFLMGVVNDDMSASIFLDRAAELDEFTSGDGTQRTESSMLDAMGTPQGLSRMLMDGRTAIVTVSGDLGQEGSIVDMNASACRLLGYRQREILGRNVSCVIPAPFSVAHASYIRKYLETGAKWMVDGTTHLCAVHKSGYAVPIAIHVRQVCSKSGGIVFLAVMAPDESDGNQDVLIVGAAGGLITCTPSCATLLGTDIDEIERSRPAISASRFLPDVAAEMAASESASIGEERTNTRQTEVDVVTATNGRVRVRCFISFLCGSDGQKCYFFKLVAREDKRASAASTHAGTVSAKRRSSYVAALPGIVRDDTDTDDGADDKAVDHYETFGRSNNRTPHSQREPTSGMHADGESQFNAPSWPDQPIPPLLMQKGTSKSVQFHERKGSDSSHAEEATRLEIIEVVEVERNSQQYATPAFDSVGSDPSGGVATARDPYAGDVMSVPSKGRTGFPEAASSNGSGLSSSVAPIQRIRQNILNGSGQGLGRLGVVFAVCLFLTVTGIIALAAVGTTTVNGHFDAYASGVADAVTASKLLGLALEILTSTRMLVLQHHGLYDFYNETSLTNRLYTAGYDLSDLHEQLAARYSAMPAELQAFYTQPTINAAVLWNGNETSRRYNMWDLLDLYTQKAVLLSKDTSVHFDDRTPEVWFISINTVAVIVPAIIQVSNLYESQAQRLEATTIDAEKSVFIASMAFIFAATIGVLVPLLALIERRQTRVIWMFLSLKRSSLHQLLDVGRRRLESREALEEGYDDNTAEADPGQEAQPTHDDAVPTAPKGAPQTHLEQLVSVHADQPAQTSSATSARVRRRGAGRPRTVPKRQKIALFVSNQRNGLLKIAAVIIASVVFFAIVHNDFSSFMQTRNGAASSIKVSARRSYATGVSFHLLRELVVDNTTTLLDRHIAEITAALDMARQSHTALLYGNASMGIRGTASDGRFRQLMYYDACIDSLPSDCPTIARGIIGNGLSSAIFAFLDSVGELLTTAAELPIPTAPTLALQFFQRPDFRTFETLQRYYLIPALDYATTLYMSTLNSDVKAKSDMRLVEMIAFCCVIGVAYVIFLLRMPRRLSRDARKMQSLLLSVPPDMLRTAPSFQRIVIEYMDFARKRR* # ORIGINAL: g8297.t1 original gene structure, not modified by PASA NODE_359_length_26008_cov_41.4396 AUGUSTUS gene 6553 10244 . - . ID=g8297;Name=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS mRNA 6553 10244 . - . ID=g8297.t1;Parent=g8297;Name=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 9795 10244 . - . ID=g8297.t1.exon1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 9795 10244 . - 0 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 9400 9626 . - . ID=g8297.t1.exon2;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 9400 9626 . - 0 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 8516 9223 . - . ID=g8297.t1.exon3;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 8516 9223 . - 1 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 8231 8301 . - . ID=g8297.t1.exon4;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 8231 8301 . - 1 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 7584 7723 . - . ID=g8297.t1.exon5;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 7584 7723 . - 2 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 7071 7292 . - . ID=g8297.t1.exon6;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 7071 7292 . - 0 ID=cds.g8297.t1;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS exon 6553 6669 . - . ID=g8297.t1.exon7;Parent=g8297.t1 NODE_359_length_26008_cov_41.4396 AUGUSTUS CDS 6553 6669 . - 0 ID=cds.g8297.t1;Parent=g8297.t1 #PROT g8297.t1 g8297 MGGPAVDLHLCDETGSVSLLETPHTAPSAAAVQHGGEAIPFVVGTGDPSLSVDITGPLHTSMGLGGTEALRALEHLRPKNMANGSHDGVASTHAVNISDVQDARAAPANGCAKVNGPRATGKAIVVERTVMANIPTGDGEFRLAIYANNSDDKEHMAMIYGRPELYDDVPVRIHCECFTGDVMGSLRCDCGEQLGSAMTKIAEAGVGVIVYLRQEGRGIGLVEKLRAYNLQDRGYDTVEANLALGHQADARDYTVGALILRDLGVNSVRILTNNPDKIECLRTYGISVSERIAMRPHRLSEYNLAYLTAKVKRMRHLLKLSEIGAPSANGLPAETTLRASLESIPRSPLRSPAVTSLAANESYPSSGSATPDIPTPSNSRAELLSSRGSVDADADADADADTAFVAHAVDMPLPSVELPGVRLAQRPFVTLTYAQSLDGCIATADRRPLMLSGPKSMTLTHGLRATHSAILVGVGTIASDDPRLTVRLVQGRNPQPVVLDSSLRFPLSSKLLSGPTRPWIFCGPDASADRRKVLGEAGATVISAPFADDGCGLSLPFVLRELANRGVDSLMVEGGSAVIQSFLTGGAVDRLIVTIAPVVIGGVSAVNRNADSVRIALPRLINPRYEQYGTDMVLFAEPSWEVRA* # PASA_UPDATE: g8300.t1, single gene model update, valid-1, status:[pasa:asmbl_6266,status:12],[pasa:asmbl_6267,status:12],[pasa:asmbl_6272,status:12], valid-1 NODE_359_length_26008_cov_41.4396 . gene 18733 25975 . - . ID=g8300;Name=g8300.t1 NODE_359_length_26008_cov_41.4396 . mRNA 18733 25975 . - . ID=g8300.t1;Parent=g8300;Name=g8300.t1 NODE_359_length_26008_cov_41.4396 . five_prime_UTR 25975 25975 . - . ID=g8300.t1.utr5p1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 25861 25975 . - . ID=g8300.t1.exon1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 25861 25974 . - 0 ID=cds.g8300.t1;Parent=g8300.t1;5_prime_partial=true NODE_359_length_26008_cov_41.4396 . exon 25376 25701 . - . ID=g8300.t1.exon2;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 25376 25701 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 24409 25138 . - . ID=g8300.t1.exon3;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 24409 25138 . - 1 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 21957 24134 . - . ID=g8300.t1.exon4;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 21957 24134 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 21656 21772 . - . ID=g8300.t1.exon5;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 21656 21772 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 21241 21507 . - . ID=g8300.t1.exon6;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 21241 21507 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 20389 21029 . - . ID=g8300.t1.exon7;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 20389 21029 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 20147 20279 . - . ID=g8300.t1.exon8;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 20147 20279 . - 1 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 19764 19878 . - . ID=g8300.t1.exon9;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 19764 19878 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 19331 19599 . - . ID=g8300.t1.exon10;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 19331 19599 . - 2 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . exon 18733 19050 . - . ID=g8300.t1.exon11;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . CDS 18895 19050 . - 0 ID=cds.g8300.t1;Parent=g8300.t1 NODE_359_length_26008_cov_41.4396 . three_prime_UTR 18733 18894 . - . ID=g8300.t1.utr3p1;Parent=g8300.t1 #PROT g8300.t1 g8300 GKPWPHILLTVQRAAFELEDDPFEAALGLNSELAADELIERMRREAILIDKLDALRQAQGMRISDVKVEELMHALDSKNATIYRERMERVRALRARDAREGDRQRTHMGPMLLSVVADGLHMAGMSDDALCGKANIVRRMREIDDVSPFPEEGMDFSTLWGRKTRIACAHLIVRLRDYPLPLAQLTDLYAYGTLIGAESEATPAATRCLDVPCGRGRPPVPGMRKMPALKFIHDLRLNATTFSACWGVAYEPVLSHVGAAADRLNKASADPSPPLPFWDKLRMLFHGHLTLSADAASVNLPATRDPLNTVERLELSWNRFQLTLNPGVLGLYGDLTALLRAASRYDDCEVMRLPGLTWTVGFEWDCGAFNARDHHGVMPCAPEHVPVGSLNHDSFRRFRSLHLAYNLALTCDGSHATSPSLLLYASTLRWFRLFFALLGITSRPIRRGAAFGDPRIQKPQLGRHMNRLSLRISLPGMRLRYLQSQSHPEGFKIAAQRAVAAFCWKMELKPALDDGLKRRPDADWSLLFSRVDLGDARVVTYSAQHGSSQKIAGRHLLGCSLLRYERGAVSGGDGDKEGLGDGAAKREANSRDGFTHSIYSEDLRCLWSKVSRDTVFALIGAYSESHALQVDLAVNPATEFAVAPPEKSFFEGGGMGSNQSDALAADNLNDPERLLGRLVSEARSNNFMVYSDGANPAHGNGKSLPDGKATKKADAEGDKGGVGVRMVGVALRDVRVELVGAQISFEAPETKTRLILAARRAEICIQTLRPIWVETHFIGRTNYSGMLEGGEFFADLGGEPEVRWLPASAAAPDGALGGGGVSRHEPLPGTRRLVSDCECDFSYTSHISITADTANTLNEAAGRIASATSSLSSGDAKRGSLLAGGDAKASSANAFWIRFPSLCVTTSSSEFSCIQDVVGNLLIYTAPKSAAWRDRMETMKHTLELAKTDSASTVARLQSAVKDAVRVVQQLDFEVYLLTREGAPVPDPDVLAAADAELAAAKQNFTKLRDDLRVVIELFRERNQRLSGRATRASSERNEVRLHSCVDIRIGSVLWKVETPQQSQAQAPSASGNADMEGVAGGRPICVEVALKTFVYTRQDFEDASWENRAELGELEVLNRMPNAHYETALSVYNPHGRRVQIDRDVMLRVFNRQKAPVGGIPVMEHFEINLVPIALQITQELYGALFAFFFPAEKDREVGMPGASLSTNTATTLDAKRRSPHHSREPSSTGTLRIDEADAEENAERNDSSADDSPDADADLAWDGKPRSSSQLSRKTSGGAAARTDPSKVSPARPPPPRLSRPVSMDFSQLRGGADGPTAPPSLASSSNKTPPPRPPRPLSVIDQRSSPPPPRPPPPTMLVSDEARPSRVLTSSVSMASLAMSDGSVVATPIHPAEAHSSRGHQRAVSMDVRTQANQHRRSTSTSLVGITTGKSTAPQIGSIQEVASKDKQASEGVAEPPKTRKAKAKGGGMDIDEMKARASQNTAFIYVKVPEVQLCVSYKTDNQASILNVHKFVLNLPTFEYHNRTWTWLDFLMQIKKDSVQILVSQVIKEKLRFKSRVDDADADPPMSQDDASGGAHPVAAAGADATAANMSIDIASKQPQAPPRKKKQDHATGRAGETVSAKDEVKAALLLGTRITTPVKSADGSQSVSPHRKDDPAPSSVAYDTTSDWMSSMLGKK* # PASA_UPDATE: g3979.t1, single gene model update, valid-1, status:[pasa:asmbl_9407,status:12], valid-1 NODE_793_length_17616_cov_87.2714 . gene 624 2615 . + . ID=g3979;Name=g3979.t1 NODE_793_length_17616_cov_87.2714 . mRNA 624 2615 . + . ID=g3979.t1;Parent=g3979;Name=g3979.t1 NODE_793_length_17616_cov_87.2714 . five_prime_UTR 624 729 . + . ID=g3979.t1.utr5p1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . exon 624 1113 . + . ID=g3979.t1.exon1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . CDS 730 1113 . + 0 ID=cds.g3979.t1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . exon 1376 1423 . + . ID=g3979.t1.exon2;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . CDS 1376 1423 . + 0 ID=cds.g3979.t1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . exon 1928 2003 . + . ID=g3979.t1.exon3;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . CDS 1928 2003 . + 0 ID=cds.g3979.t1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . exon 2233 2615 . + . ID=g3979.t1.exon4;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . CDS 2233 2372 . + 2 ID=cds.g3979.t1;Parent=g3979.t1 NODE_793_length_17616_cov_87.2714 . three_prime_UTR 2373 2615 . + . ID=g3979.t1.utr3p1;Parent=g3979.t1 #PROT g3979.t1 g3979 MAEAVTRPPAAPHPPPAPAGARNDGDEVPTYVRDHQSNEMQRSFYANWRPQGTQSQQQQQLPHRQQHPPSADEEAPFIGERRSSTLGDETTPLTGNGGKGASGADGVFRRTNDVDGTPVYKRNMTDKEVFVVWGVVGVLLVNVFLTFVFSIVRGYRESRNFYMLGVNVLLFAMMLGFLVKWHVDGALALEKRPFLWFFGVCLLFQCISSNIIMWA* # ORIGINAL: g3982.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 10867 12426 . - . ID=g3982;Name=g3982.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 10867 12426 . - . ID=g3982.t1;Parent=g3982;Name=g3982.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 10867 12426 . - . ID=g3982.t1.exon1;Parent=g3982.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 10867 12426 . - 0 ID=cds.g3982.t1;Parent=g3982.t1 #PROT g3982.t1 g3982 MALTERSSSVIALTSMTSPGSMHNSNGNKNSSSIGSAGSDHDSHDDLHNHDLHHDSHDTRLLLGGASTVVSKQDKDHEAHYTCAVSEHPRTGTILTSIFNLTNTIIGAGLLALPYAFRASGLIVGLVLIVASFIMTNYSIRLLVSASKSVSEKTYSALCETAFGKWAKILVDVSIVISTYATAVAYFVVVGDVLSAPISYWMNDGCSFVADRRFPMILMLAAVLPLAMLRKVNDLTPISVVALCSITFMVLMVVVRGVQSIQDYPLDIGSFCRQNVTGVANVGGGCLSLAVNDGFGVFRSMSIMTFAFGCQFNVLTIVGELSNPTRKRIVLFVDLGVGAALVLYAGIGVFGYLAFLEDIRGNVLLNFASSDIVAVIGRFAEAIVLLASFPMMTLPLIRILERYVLRDRPFSWCVHVPLVCATVGTAFVIAMVVDDVSLVFGIAGSTASTLISYILPPMLYLKFKHIKAKNARPYASRKNLLSIGLLLVGVAFFIISTVVTFIPDDSLQSGDPTRITCTH* # ORIGINAL: g3980.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 3334 7686 . - . ID=g3980;Name=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 3334 7686 . - . ID=g3980.t1;Parent=g3980;Name=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 5516 7686 . - . ID=g3980.t1.exon1;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 5516 7686 . - 0 ID=cds.g3980.t1;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 5127 5211 . - . ID=g3980.t1.exon2;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 5127 5211 . - 1 ID=cds.g3980.t1;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 4459 4764 . - . ID=g3980.t1.exon3;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 4459 4764 . - 0 ID=cds.g3980.t1;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 3334 4155 . - . ID=g3980.t1.exon4;Parent=g3980.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 3334 4155 . - 0 ID=cds.g3980.t1;Parent=g3980.t1 #PROT g3980.t1 g3980 MSDVYVYARGYIALCGPSVEAAADAAIASGHVPYTAVQAMRAARGHGQTDSSGGATVDGSSNWTHHITVVSKQELQGLALVNGESRDDAAVRVLDAAHADCPADFVDLGLGSVSDSGETAFFAVIAWPASFRLRRELNLSPSDMHVTVGFARRDVHDVAKGVSTLVTLAHGVDVAAADDAGSSVAWAARLSDGCGAIEATLRTKCDGCNQIAISCATLILDAWNIARPAPVIDCGNVDAPATAVQECSMAARLLSLRATAYGAIGSADRCMADASVAVALDGNCAAAHAMIGAFLYRQKEYAEALASFNRARDASVRSTSASAKAVQGDAEAAYIWGGIEKCLAKLSTEDAPASNSACESVLGSNAPDSAVDGSNNTPSTAACDPRVRTFVTIGDGDVVKMPRNFSWLVPGCIAGISLPKKPDHIRALASEGVRLVVTIFDHPLPAELFSTVAGVRSHFIRVENYGAPTNDELHAYMREVERTIALGGAVAVHCGGGKGRAGTLLAAYMIKHGLELPSRERGFSASYQPADWAIRTLRAMRPGSIESIEQETALREYSDSLWRQLGTGSEDEQEYVDAVKADGAGNAAGNSKVHAHGNMSADNTSRSSAESKEGDTSAKCVPQARYPSTPHLPFSPAELADDDTQYAGSVDASFVGVDVVVTEKIDGGNCCLKGGEVYARTHSKPASHPWFGPTKALYAQFAHLPQCEGVSLFGENMAAVHSIRYGPLESPFYLFGARYEATGEWASWDEVEALASTLGVPTVPVVFKGKFASSSEVQRLMDQRATAPSMLAGEESGTTPEGFVIRASRGFSDSEFGRNVAKYVRQNHVQTDVTWAAKWERAVMAGQGHKANAKGKGKSKESSDVPAKELPTAGASRLSAAAAQSSLSGNGKSSSTAWSLNVANSTDKSGGVVASSKKASAPSAPHAHPPKPKSSMRNVPNLLVLAGIPGSGKSTFSSALADSSNGAWTRVCNDELRSKSECERIVGQAKGANARVIVDMCNVTPADRAQWLALSPHSGDPKRTAAVYFESNAAECVRRVRERANHPTIPQGRGGHIVESFAKRAAAPSKEEGFGTVYIVRSVDDVAALVTRFGGDSRVYRERLEVLSASAGTETAASGSRMTDYDE* # ORIGINAL: g3983.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 14034 14605 . + . ID=g3983;Name=g3983.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 14034 14605 . + . ID=g3983.t1;Parent=g3983;Name=g3983.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 14034 14390 . + . ID=g3983.t1.exon1;Parent=g3983.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 14034 14390 . + 0 ID=cds.g3983.t1;Parent=g3983.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 14504 14605 . + . ID=g3983.t1.exon2;Parent=g3983.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 14504 14605 . + 0 ID=cds.g3983.t1;Parent=g3983.t1 #PROT g3983.t1 g3983 MADEPPSVTVQTARAQDEGEWRPLWKAYCAFYGVDISEKVTDDVWKRIINVESPTKSFIARFQGRVVGFCNIVLHEFTWGTKPVCYLEDLYCDVEMRGKGIGAALIRHVADLGKGRWDKVYWVTKHDNTTARHLYDKICGETDGFVRYTIQL* # ORIGINAL: g3978.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 76 248 . - . ID=g3978;Name=g3978.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 76 248 . - . ID=g3978.t1;Parent=g3978;Name=g3978.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 76 248 . - . ID=g3978.t1.exon1;Parent=g3978.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 76 248 . - 0 ID=cds.g3978.t1;Parent=g3978.t1 #PROT g3978.t1 g3978 MAQMGRDRSVSSSSDEGESAWPLGRRSRYEDTDNDASDADHNDEDDGLVLAAEGSND # ORIGINAL: g3981.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 9083 10357 . + . ID=g3981;Name=g3981.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 9083 10357 . + . ID=g3981.t1;Parent=g3981;Name=g3981.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 9083 10357 . + . ID=g3981.t1.exon1;Parent=g3981.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 9083 10357 . + 0 ID=cds.g3981.t1;Parent=g3981.t1 #PROT g3981.t1 g3981 MGGAVNGIYCPTAGMGPSEAVGCDPSHLFGTSPGIDCADRKGDAFNLSDVREDALPSARKIASVQVVSAVSPVPNAERLEVARILGWNVVIKKGEFAVGDRIVYAEIDAVFPDTIPEFKPFVGKPLRTKRIRGAISQGLAFPLSILPPKQGSGQASATAVDLIATPAAADKVTCGPALPGGGQPDWNIGDDVTDILGLSKYISLEESGQYASKGARSFPGGVPRTDEPRIQSMPMLLELARGRRVVATRKEDGTSCTFVWRGEDIGGGAICGRNFQWSAVTPSNKVYHDVEREYGILEKLAAFNRHIAVQGEIVGPKVNGNRLRLNKPEFHVFNVYDIKTSSYLRHAEVVAVAKMLGVGIAPVIFERILGEDVDDTVDSLLGLAGELEYAHGAPAEGIVVKTDDGVDPRVSFKVISNRFLEKVH* # ORIGINAL: g3984.t1 original gene structure, not modified by PASA NODE_793_length_17616_cov_87.2714 AUGUSTUS gene 14852 16453 . + . ID=g3984;Name=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS mRNA 14852 16453 . + . ID=g3984.t1;Parent=g3984;Name=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 14852 15020 . + . ID=g3984.t1.exon1;Parent=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 14852 15020 . + 0 ID=cds.g3984.t1;Parent=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 15456 15596 . + . ID=g3984.t1.exon2;Parent=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 15456 15596 . + 2 ID=cds.g3984.t1;Parent=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS exon 16212 16453 . + . ID=g3984.t1.exon3;Parent=g3984.t1 NODE_793_length_17616_cov_87.2714 AUGUSTUS CDS 16212 16453 . + 2 ID=cds.g3984.t1;Parent=g3984.t1 #PROT g3984.t1 g3984 MAASQQYSEKDAERDIRRGGLEYVKQTPNFLKMLQGTVDKAEEAKRPPKRMTRDSDEEEKEDEKPVVVVIEKKKKRKHSTVDQVDPADTGDAECGPVDESESEDDADDINNETDDGRHVFKRPKKKAKTAEAQTTTATTTAKQAPKSSISGVSASSKPLAASVAKSKGNSKPLNKSLLSFDDE* # ORIGINAL: g2819.t1 original gene structure, not modified by PASA NODE_5690_length_752_cov_76.4165_potentialcontaminant AUGUSTUS gene 4 684 . - . ID=g2819;Name=g2819.t1 NODE_5690_length_752_cov_76.4165_potentialcontaminant AUGUSTUS mRNA 4 684 . - . ID=g2819.t1;Parent=g2819;Name=g2819.t1 NODE_5690_length_752_cov_76.4165_potentialcontaminant AUGUSTUS exon 4 684 . - . ID=g2819.t1.exon1;Parent=g2819.t1 NODE_5690_length_752_cov_76.4165_potentialcontaminant AUGUSTUS CDS 4 684 . - 0 ID=cds.g2819.t1;Parent=g2819.t1 #PROT g2819.t1 g2819 MDIRELMKPTAHVFIMQRLPDVNRIANIHKYIAKHYQSSGMIPRFQDIVFAVFRDGSDRSFHILDGQHRYYALRDFHVATGSVFNIGAQLRVYDSQDEAAEDFQNLNKTEPVDREDMFEGTFEERVALTDALRHIQEKYGRAFKMKTRAGKEIKVLRRPFVQLHHIHRPLVRKGIIRKHGLNTSEKIVAYVEAASNKLLASHANEIGHREAAEMEFGIGLSRDNWC* # PASA_UPDATE: g6573.t1, single gene model update, valid-1, status:[pasa:asmbl_9935,status:12], valid-1 NODE_904_length_16029_cov_39.0263 . gene 11015 13759 . - . ID=g6573;Name=g6573.t1 NODE_904_length_16029_cov_39.0263 . mRNA 11015 13759 . - . ID=g6573.t1;Parent=g6573;Name=g6573.t1 NODE_904_length_16029_cov_39.0263 . five_prime_UTR 13699 13759 . - . ID=g6573.t1.utr5p1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . exon 13342 13759 . - . ID=g6573.t1.exon1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . CDS 13342 13698 . - 0 ID=cds.g6573.t1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . exon 12887 13123 . - . ID=g6573.t1.exon2;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . CDS 12887 13123 . - 0 ID=cds.g6573.t1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . exon 12053 12476 . - . ID=g6573.t1.exon3;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . CDS 12053 12476 . - 0 ID=cds.g6573.t1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . exon 11694 11854 . - . ID=g6573.t1.exon4;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . CDS 11694 11854 . - 2 ID=cds.g6573.t1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . exon 11015 11324 . - . ID=g6573.t1.exon5;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . CDS 11094 11324 . - 0 ID=cds.g6573.t1;Parent=g6573.t1 NODE_904_length_16029_cov_39.0263 . three_prime_UTR 11015 11093 . - . ID=g6573.t1.utr3p1;Parent=g6573.t1 #PROT g6573.t1 g6573 MQRMGLFSIRTCSAALVRGGVHVVIRHSNPQMARWGLGCAQAGRYTTGPNARATQHAASSQSPPGVEPAVGTTRSRRYMRYALIYAGVGLGYIAYRQYAQIAHPETHPLPAPVPLSKWEEKAILALPLRAVSRLWGRMHSVELPEWLRESVYYKYSSAFGCNLSEMREQNLKAYPNLGEFFYRELKDGARPVDKAVDLVSPSDGRVLIFGEVTADRIEQVKGMTYSLSHFLGSDSSAAKRISSASAQDALGAPDGTAHTHVTAVVAPEGQKAASGGWSLLGWIPYWGSGNSANANDAGSIPAAAQHTKLFHIVIYLAPGDYHRFHSPADWTATLVRHFPGELMSVSPALTRVFPDLFALNERVVVSGAWKHGYFSYTAVGATNVGNIVINAVKDMRTNLPGRVIPGDRRDYRFDALPLNRGAEIGGFRLGSTVVLIFEAPANFRFVVEEGQRLRMGEPLGTTIAAAARA* # ORIGINAL: g6570.t1 original gene structure, not modified by PASA NODE_904_length_16029_cov_39.0263 AUGUSTUS gene 292 407 . + . ID=g6570;Name=g6570.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS mRNA 292 407 . + . ID=g6570.t1;Parent=g6570;Name=g6570.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS exon 292 407 . + . ID=g6570.t1.exon1;Parent=g6570.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS CDS 292 407 . + 2 ID=cds.g6570.t1;Parent=g6570.t1 #PROT g6570.t1 g6570 KLKDLGNLVLGKFGLSTDNFQLQQDPATGSYSVNFTR* # ORIGINAL: g6572.t1 original gene structure, not modified by PASA NODE_904_length_16029_cov_39.0263 AUGUSTUS gene 4688 9373 . - . ID=g6572;Name=g6572.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS mRNA 4688 9373 . - . ID=g6572.t1;Parent=g6572;Name=g6572.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS exon 5897 9373 . - . ID=g6572.t1.exon1;Parent=g6572.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS CDS 5897 9373 . - 0 ID=cds.g6572.t1;Parent=g6572.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS exon 4688 5752 . - . ID=g6572.t1.exon2;Parent=g6572.t1 NODE_904_length_16029_cov_39.0263 AUGUSTUS CDS 4688 5752 . - 0 ID=cds.g6572.t1;Parent=g6572.t1 #PROT g6572.t1 g6572 MEASMKARQFDDAAMSVLYCMVKDLDFESLGYALLFIEDVQLLSFSWSRHFGFTPLPDLFSFEYPGTGSNYDIYLILFGVFFSMVVVAFLTGVYIGISYRSGRFRAVWPVRLLRVLSAAMSTLLLIPMVAVFVQALDCKQSSLSHEYELASFPGTACFSGRHLPVFILSFVALSAMLVYAFVMSLVYFDPDPRSKKPGSKPHGRTDTAYMAVRVLLTIVYEFAGHTHSGQSAKLALALPCLILLCYLVLVYQPFYAAHMTDIRAGIFFCATGSVVIAIGTFASNGNGVAPFAVLCVLAPVFFAAGYFASGWARRRIIMGVYSRLAVAPPIRLLSRQATAFNIRDMAGYAASGDSPELKGKWTMQGISRVAFRHNKKDPPVFVRVTDVEIASRFLRHNRDPDAIMLAHDLFAAALQQFPHSPLLRIVHARYIAGYSGQAAAAHKQLEAAMAMRPAFDVRCLLFMEWRTLEQEKNTEGLGISDSLTITSYIQFQMAQAGARTHHIEALRRLCEFWRTSARSSIVDPEILFLHLHELSVSTNKAQRHYERLITEFPKSKTNLRLYAHFLSVVCNKPEAAEEYSQAAARIEDEETRLSVARAKMMQMRRENRNRANDAQGTSHGDGNDGESDGDSDGGDDGYGGNDGDHGNEEKSQEQARNEWMQCPPLIDDRIQSIEGGISSGVGARFEAELPGLMSYEPPFSETDDVCQVSMSTKPLTSALEHHVTDAGQYVDDDSHKVSYDVSLNDVDGSVSVNVPEDTGPAPTNDPPKTKRGGGRRLSVVAFEMAEIPARKNNNNNNKRAVISSPRVNRSPDTFRKAETEALASQHGAVALEGQAQTPPFPSAEIDEPRKYSVDFPRAIREAQSEHSGGSRPLAALEPAMKTTRSTASFSSGSREQAMQRMRRQRIETRLTKPATRQRFQGTLLCVALLSILTAGYVLSIKGFDSQRARLDELKTITRPRTMIASLALSARQLVLAVDTGDASLYNATVAEMGADVNMFEDDILPKIVANSKGIPSIRMLTQVSPLKALVASTLSGADASIAAFRQARSIVATPFSIASQSNMLLRADIRYILDNGYNCALGLSKEMEEHQESYDNQSSETDSIAYALMAIFLAIDVSMALLVFWPLMREIGVRRMRVMAVFKLLPKPHVSERVAALDEELQTLITMIPEEADKLGLAGPADGTESAEALLAERTQQTMMLESGFGGGLAGHASAATAVVGTTSPVEVNDRAETGTQSTKLRLWIRFLACIVVVGAFAAGMFALTFVQTDKNSTLARLLNLSNTRRYQVEGVAGLANELAVADNTTWQGLEDLTTAVEWINTLDKTHFDCLHGTARTPSTNSISRLYFELIGEGLCHLDDRTGCEARAYNASVGLTKELVLLPLNRLIEHFMDLAISYTVEDPPFAYDDARRIVMSVIRKDIREGLDHADNIIIEEVESSIATTKIGLDVLFAMTLASLLVFFVWGVLSVTRRFEREIVQSVRLFFDVPQQVVVNVPQLRRFIESGGDLEQKP* # PASA_UPDATE: g6574.t1, single gene model update, valid-1, status:[pasa:asmbl_9936,status:12], valid-1 NODE_904_length_16029_cov_39.0263 . gene 13922 15781 . - . ID=g6574;Name=g6574.t1 NODE_904_length_16029_cov_39.0263 . mRNA 13922 15781 . - . ID=g6574.t1;Parent=g6574;Name=g6574.t1 NODE_904_length_16029_cov_39.0263 . five_prime_UTR 15738 15781 . - . ID=g6574.t1.utr5p1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 15694 15781 . - . ID=g6574.t1.exon1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 15694 15737 . - 0 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 15328 15409 . - . ID=g6574.t1.exon2;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 15328 15409 . - 1 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 14963 15052 . - . ID=g6574.t1.exon3;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 14963 15052 . - 0 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 14640 14780 . - . ID=g6574.t1.exon4;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 14640 14780 . - 0 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 14305 14427 . - . ID=g6574.t1.exon5;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 14305 14427 . - 0 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . exon 13922 14135 . - . ID=g6574.t1.exon6;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . CDS 14070 14135 . - 0 ID=cds.g6574.t1;Parent=g6574.t1 NODE_904_length_16029_cov_39.0263 . three_prime_UTR 13922 14069 . - . ID=g6574.t1.utr3p1;Parent=g6574.t1 #PROT g6574.t1 g6574 MDIHGTVLAEARADRAERTMSQRIREEQDEAYLESLRQDQEKEQRRIRELERQREEEEAARSLELRAQQDKEERARQRKLKLARLPAEPTDDTLAARILVKLPNGARLDRKFPKTATVQDVYDYVDGNEIGVDRFILVTNYPRMVLQDMGKTLEAAGVLQGPPSKLQQGMLFVQNAEDDDE* # PASA_UPDATE: g6571.t1, single gene model update, valid-1, status:[pasa:asmbl_9934,status:12], valid-1 NODE_904_length_16029_cov_39.0263 . gene 616 4217 . - . ID=g6571;Name=g6571.t1 NODE_904_length_16029_cov_39.0263 . mRNA 616 4217 . - . ID=g6571.t1;Parent=g6571;Name=g6571.t1 NODE_904_length_16029_cov_39.0263 . five_prime_UTR 4183 4217 . - . ID=g6571.t1.utr5p1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 4146 4217 . - . ID=g6571.t1.exon1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 4146 4182 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 3816 3927 . - . ID=g6571.t1.exon2;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 3816 3927 . - 2 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 3405 3453 . - . ID=g6571.t1.exon3;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 3405 3453 . - 1 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 2703 2912 . - . ID=g6571.t1.exon4;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 2703 2912 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 2369 2494 . - . ID=g6571.t1.exon5;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 2369 2494 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 2104 2226 . - . ID=g6571.t1.exon6;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 2104 2226 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 1651 1785 . - . ID=g6571.t1.exon7;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 1651 1785 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 1331 1391 . - . ID=g6571.t1.exon8;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 1331 1391 . - 0 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . exon 616 1178 . - . ID=g6571.t1.exon9;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . CDS 706 1178 . - 2 ID=cds.g6571.t1;Parent=g6571.t1 NODE_904_length_16029_cov_39.0263 . three_prime_UTR 616 705 . - . ID=g6571.t1.utr3p1;Parent=g6571.t1 #PROT g6571.t1 g6571 MAALQTGGTVTIDTEYDVPDVLKKVAKFVARGFYSLEYQLIMDFLVSKFVATEEEIVRHLHMDKKPMRACLHQLKEHRLINSHTITQQRDPLRSRGVVAETRWYIDYEKLINVVKYRLSKLPSCLERKLRSNISVQGYQCMMCKKEFAATDYDKIITAEGEMRCDYCQGAVEELEQAEVNVEQAIANLNEQLRPITSLLKQTENVTIKQLDTLARAPGSGQSGEQRGRGGHHGGGGHGLSAANLANAEVNVKLSFNAEQDTAPKKKELPEWIQNSSLAINKSMIGVSPVKAEAAVTASRATENVTVDEETRRRLAEYYARQDAKHEPAVKQETAAIPDAHEYDAMDVDAAPHEVPTVGLLGASRACFSYVCLSAWCVRIWQSVTVCRLCVFFVVVFRTMQCVACPPDISICIVCMMCCKCRCAWAVLSTVWTRYPMISLRI* # ORIGINAL: g810.t1 original gene structure, not modified by PASA NODE_469_length_23156_cov_41.2731 AUGUSTUS gene 268 4679 . + . ID=g810;Name=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS mRNA 268 4679 . + . ID=g810.t1;Parent=g810;Name=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 268 511 . + . ID=g810.t1.exon1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 268 511 . + 1 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 965 1459 . + . ID=g810.t1.exon2;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 965 1459 . + 0 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 1607 1926 . + . ID=g810.t1.exon3;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 1607 1926 . + 0 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 2069 2270 . + . ID=g810.t1.exon4;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 2069 2270 . + 1 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 2603 2905 . + . ID=g810.t1.exon5;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 2603 2905 . + 0 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 3253 3313 . + . ID=g810.t1.exon6;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 3253 3313 . + 0 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 3519 3562 . + . ID=g810.t1.exon7;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 3519 3562 . + 2 ID=cds.g810.t1;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 3822 4679 . + . ID=g810.t1.exon8;Parent=g810.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 3822 4679 . + 0 ID=cds.g810.t1;Parent=g810.t1 #PROT g810.t1 g810 YIVQQITYKDKVCTQALIKGIFRTKAGKTANPCEVLKEFGADLHHPLIPEYIAHHRMGEETFRKATKVEMPNVRNHRHHVGREVASSGWSITKASTTCLVSARSIVSSAHVLTTSNGQHNGTTPNITDDVTKDKMANDAAEAAREERLAMIMQQMFGGGGASGPPGMTRVHVPRARSLCRLPSHPHRSLCILRSLTVLLAAIVAACCVDACAAVQDPRAAGPIVKPTESVCAELRPPPDAISLPRKLTAMNFDNTFVRQLPGDGITENYVRQVRGVCFSRVETAPMQDARLLHASEDAAALIDLDKTEFGNAEFAEYFSGNKRLPGGESWAHTYAGHQFGSWAGQLGDGRAISLGEVVNGRGERWELQLKGAGKTPYSRFADGRAVLRSSIREYLCSEAMRALGVPTSRALSLVGGSDRVIREEIETAAVVCRMAPSWVRFGSFQHQFHFKRHESLKQLADYVMRHHFGGKCDAAGNIEWTQQDAYAVSAPDSLKALESPYTKMLREVTIRTARAIAHWQAVGFVHGVMNTDNLSILGLTIDYGPFGFIDAFDPDAVINHSDETGHYSYQRQPAIGAWNLEQLAVTFTPLVGDDSEIESAIGVYWDAFNSHYMSLMRAKLGLRVPRDDDAKLVTSALEMLATHKVDYTLFFRLLSNAPAAPAGTGDGDDFALGMAPADAHPVDTHTEHGVISARGTCGTGGASRFGGCDAANGQDGQSSASHSTGTAFVPRSVSQLFPDTASARGDLASWLAAYRERIAVDGADSHSARKARMDSANPKYILRNWMAEEVIRRTKAGDVDAVAEMHAILVRPYDEHAEMEARGYASPAPVWARGIAVSCSS* # ORIGINAL: g812.t1 original gene structure, not modified by PASA NODE_469_length_23156_cov_41.2731 AUGUSTUS gene 13489 14895 . - . ID=g812;Name=g812.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS mRNA 13489 14895 . - . ID=g812.t1;Parent=g812;Name=g812.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 13489 14895 . - . ID=g812.t1.exon1;Parent=g812.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 13489 14895 . - 0 ID=cds.g812.t1;Parent=g812.t1 #PROT g812.t1 g812 MVGFALVLVPDKGAWLPTTEAQVAACRTHRLIGAGDIDAGSNTADGGAIFGRAGGEQVPIVKCDLTDITAVIEAAVAASGARIINATLHAQKSAAVSADAGGSATRPAAGAPATVGSVQRLPRRTSLFDEIALTVISTVRNGIEYIPSHRIVATDFYGACSFADCTYLEKADADKHVVDALLTSLVGKCDPASQAPQSEWPLAIDLGSNIGQFASFLRAMQCRVKTVEPQVPLNRFFRGTLDVNKWADDGSVLVHEGAVGEEPGELKLTHLWVPGGVKANRWKQEFVAPVIPLRSIITEDVAFLKLDIDGPEAIVFRALLPILKRHSVDNIMAEITYLRWPWDFNVTYDAGAETLDKYYDLGYSVYLTYENEFKIYPPETLSKLQDLRHFHFFDHCYFIPRPHLKEVLMMANKSTKNLYFSRTVHPPPSTSIVTAQADKHTGRALTPDSEVPTAADSTAGRGGVSGQS* # PASA_UPDATE: g813.t1, single gene model update, valid-1, status:[pasa:asmbl_7537,status:3], valid-1 NODE_469_length_23156_cov_41.2731 . gene 15651 20569 . - . ID=g813;Name=g813.t1 NODE_469_length_23156_cov_41.2731 . mRNA 15651 20569 . - . ID=g813.t1;Parent=g813;Name=g813.t1 NODE_469_length_23156_cov_41.2731 . five_prime_UTR 20358 20569 . - . ID=g813.t1.utr5p1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . exon 18753 20569 . - . ID=g813.t1.exon1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . CDS 18753 20357 . - 0 ID=cds.g813.t1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . exon 18304 18453 . - . ID=g813.t1.exon2;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . CDS 18304 18453 . - 0 ID=cds.g813.t1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . exon 17141 17754 . - . ID=g813.t1.exon3;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . CDS 17141 17754 . - 0 ID=cds.g813.t1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . exon 16670 16768 . - . ID=g813.t1.exon4;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . CDS 16670 16768 . - 1 ID=cds.g813.t1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . exon 15651 16385 . - . ID=g813.t1.exon5;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . CDS 16115 16385 . - 1 ID=cds.g813.t1;Parent=g813.t1 NODE_469_length_23156_cov_41.2731 . three_prime_UTR 15651 16114 . - . ID=g813.t1.utr3p1;Parent=g813.t1 #PROT g813.t1 g813 MNQQGQPKGGGGPPRHRGSGRQMRYNSNATHNNNTNPNGGIVNNASGASSASSLAPGSPMVPKGLQQPPQPQQLMTGPSPTLSSGGSSSVGSGAGAPVVSLPKGGPKPHLGAVGPQHQQHPQHPHAPGHPQHVHAAHSHPHAHGGKQQKPHHATHQYAKHGLPSTGGPHVTSVSGPAVPLNQQQQQQQQQQQQQQQQQQQQQQAHMGPRSTDAFDILTAQHQNAAVAAAAAGYMGIHDPLAYGAGMIAQNPYGQQVGGGAGVVHMRGAVSGPSSLGLSGIPGGQQAAAGVKYGRGGPVGGNVGGGSHHYHPQSQSQSQQPPTMQQQGVQQQQQHQQQHTGLPQAGGPSLPPHAHSRRQIANAAIAQKYVRDLAKEMATLALATKDADASVHAPAPGNDVHGHGHPENDRVLDLQSTAGDLFTGSIPEDPAAAQYTTRESLGGTMYFYPPGQEPPQEEADGHPALLPLMFHVCPPSIPSVAGLSENAQSLFLNESLRQELLNRNSCVSMQLDPDRPSEVPLEVDNYHTLVPLDSAASESGRKMFGCPTSVYKAFSVVDGMPYCLVRIEGYRLTNEKALSVVELWRKVSHFGIVALREVFTTKQFGDHSLVFAYDYHPGAQTLLSRHFPTAAQQHQPPPESVLWSHVIQLTGALRAIHAAGLACRALDPSKIIVCGRSRVKLNCTGVFDVLTYDPAVAGGPNAKAITAHYQQEDLVAFGRLMLAVACGSLAALHRDHLVRSFDYLTRSYSPDFAGLVIYLLGPQPRGPQKTIEDVVPMIGHRFFTELDCLSFQHDYLENELARELENGRLFRVLAKINFINERPEFLMDSSWAETGDRYLLKLFRDYLFHQVGENGEPWIDLGHVVQSLNKVCCWAILLSLLPALYLFCDTHTHIHIHAHPDAVYVQAYCPVST* # ORIGINAL: g811.t1 original gene structure, not modified by PASA NODE_469_length_23156_cov_41.2731 AUGUSTUS gene 5438 12491 . + . ID=g811;Name=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS mRNA 5438 12491 . + . ID=g811.t1;Parent=g811;Name=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 5438 5642 . + . ID=g811.t1.exon1;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 5438 5642 . + 0 ID=cds.g811.t1;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 5777 6603 . + . ID=g811.t1.exon2;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 5777 6603 . + 2 ID=cds.g811.t1;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 6723 12224 . + . ID=g811.t1.exon3;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 6723 12224 . + 0 ID=cds.g811.t1;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS exon 12399 12491 . + . ID=g811.t1.exon4;Parent=g811.t1 NODE_469_length_23156_cov_41.2731 AUGUSTUS CDS 12399 12491 . + 0 ID=cds.g811.t1;Parent=g811.t1 #PROT g811.t1 g811 MDATPGVVLVRNACERMLDGEHDGVDSIRTDEFYADDAHASDLTLDDLASLWLAGVDIAHISSADASKDAMRQAADGAVEGSSESHLNGSAGIDDAETQLGGARAPAHEESCAHVARGTDSAETAIIALVSPPPPRRADDPLPFTSPPLFSPESARKYNNQSNNQHNSQHNSQHNNAREDECAETECDREPTSASMQPMTALASAVTPTQMPATLVLPPTTDSPSYRHVGILMKTPCSTRSAMGVRSAGRSVASVTSTATTVVLDKTDDDSPERVVGILGCVNPNKDAAGGNGAAAAWTAERAVGGWADASPAMVEPRRRAVAGNISHVDYDDGASPPLISPPEVHSGGMCARVAFSAVDPNESLCSPPSGMERIMDNMSDLGMFGDTFGTTQGSESRSRAAQSADSHTKARSETGNEVASSGVGIAKSLHDTFALAAVPDVSVRGLEESVRGQAALPSAMNPSSGRSGESQRRDRHTDAEVETGLSGVTNFAVTDLLRCSPPLFTQRTSQPVINVTHASVDDVLGAPSDHCGVNEQPVCPQAQQGNTSTGSTMFGASDCDDVLLLEGLMDVEVAASGTITAGNNFETLSRDKLLSEARVESNGGRHAAESTESALTGSARAIIAKDLSRDSSPTPPQCDGFRTAGGAKVTLSEEAVRRAKSFFDDEGAMAFAPAATAGPEAFQGFRTAGGAKVTLSDDAVRRAKALFDEEGDAAVAPAANAGPEAFQGFRTAGGAKVALSEEAVRRAKALFGDEGDAAVAPAATNAFQGFRTAGGAKVTLSEDAVRRAKALFDDEGDAAVAPAANAGPEAFQGFRTAAGGAKVALSEKAVRRAKALFDDEGDAAVAPAATNAFQGFRTAGGAKVTLSDDAVRRAKALFDDEGDAAVALAATDAFQGFRTAGGAKVTLSEEAVRRAKALFDDEGAVAVAPAATAGPEAFQGFRTAGGAKVTLSDEAVRRAKALFDDEGDAAVAPVATAGLEAFQGFRTAGGAKVTLSDEAVRRAKALFDDEGDAAVAPVATAGLEAFQGFRTAGGAKVTLSDEAVRRAKALFDDEGDAAVAPVATAGLEAFQGFRTAGGAKVTLSDEAVRRAKALFDDEGDAAVAPAATEAFQGFRTAGGVKVTLSEEAVRRAKIVFDDDPSANPQTKAETDATNTMGTEGTRRAAVSGAATKASGNSTALNASAGSLRDATTLPMAASPSASAPVRVPLVFQTRNRPSCDAAPPTPGHFMPPSAGVGRFKPHVSPLTPAHTLHAPVPAMQGVQGSARKRPATTGPETHTEFKTPFKKPRMNVVTRPTPTATPVTLPAGVSPAQSNHAVASKSVASAFSMIADGPRQSLREYVGGLPPQTGASREQLRSMSVSVFAFDINPLTAGEYRMPHVMSQSDTLSSLIEPGADGLVGADEYIVALGRCPGVNTAHVARPWVVNHLRWILWKLACSEVSHPEMFAGKRLQTAVVLRQLLYRYEREVNLGHRPVLRKLYERDEAPGRVMVLCVSRIDEPGKVRLTDGWYEMPAVLDAPLAERVSAGAIVVGTKLFVGGATLSEGEPVPPLEASEDIVLRLHCNGTRRARWDTRLGLRGFGSLHVPLSSVSPGGGVVGCLRLVVVRKYPVQFMEVLGGNDAKLAEKEKIVRNQRAEERAVLRVEDARRHRMEAHFGALGSAERIEGSAATESAAFPEDAVARNITTFFRVRAIDVGAVDGTANGDRPAECVLTIWRPSDGLEELMQEGRKIRVHACSPSRSAVQRPFHKGHGSVLQLSTLRNTMFADLHATPAAKAGSMELPLSLRRRCTSFGSIIDASPAQLAAFTSGCEGEFDGVGIVVGFGDAGTDRHSQPLFIADLHGNVLCVECMGGMKHLAIDDFCKPRTRVAFFNVQYVGRDVAKRLVSAVANEQSVVSLSPRHPHLRHALEVMGSALGVCDAHSVDAFLAAMEARVAALFAGGVLEGYPPALIPIRVSDMAPMEGVVSIAAAGFVRPLGSGGILVSPVTHEALAGACYIHVRATGLTEEPLSEAPIVSAVYAVADDGLHRRPVRASGSNAVGLFECLMTPLPPWMRDFVGTGRLSTVTSGHRGCRGDAISCGEEPAVNEDTAETATTRRVDERAAVFARIFETLRSEASIIAHAVAFAVTDDTDDGGVCECDACARVRVVPDKVPFSREEWRLFESGVKAAVCGKNVKMSLARPTSSLTSMASQCVEQLCEVSNVARA* # ORIGINAL: g2268.t1 original gene structure, not modified by PASA NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS gene 1912 2319 . - . ID=g2268;Name=g2268.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS mRNA 1912 2319 . - . ID=g2268.t1;Parent=g2268;Name=g2268.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS exon 1912 2319 . - . ID=g2268.t1.exon1;Parent=g2268.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS CDS 1912 2319 . - 0 ID=cds.g2268.t1;Parent=g2268.t1 #PROT g2268.t1 g2268 MVVSSQSNLKKTVTADGQYSIKKYMCVIRPAACLRWLLSNSDVTQMTMTINEDTCGKHIFPDIQRLIEAKQRDRKAMTSRVESIDNWIADILEQVKTTFPPGCQTSFTSSTSSTTSIDRLNKLFRKIVLSAEYDC* # ORIGINAL: g2267.t1 original gene structure, not modified by PASA NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS gene 74 261 . + . ID=g2267;Name=g2267.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS mRNA 74 261 . + . ID=g2267.t1;Parent=g2267;Name=g2267.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS exon 74 261 . + . ID=g2267.t1.exon1;Parent=g2267.t1 NODE_3870_length_2590_cov_46.2473_potentialcontaminant AUGUSTUS CDS 74 261 . + 2 ID=cds.g2267.t1;Parent=g2267.t1 #PROT g2267.t1 g2267 HAAQRSCRWTHCLVILHCLSVHTESAVTRSCAPTLPGLVMRGCAWRSRVWSDATPPTLAFSS # PASA_UPDATE: g11291.t1, single gene model update, valid-1, status:[pasa:asmbl_7094,status:12], valid-1 NODE_4203_length_2032_cov_35.4037 . gene 130 1876 . - . ID=g11291;Name=g11291.t1 NODE_4203_length_2032_cov_35.4037 . mRNA 130 1876 . - . ID=g11291.t1;Parent=g11291;Name=g11291.t1 NODE_4203_length_2032_cov_35.4037 . exon 1348 1876 . - . ID=g11291.t1.exon1;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . CDS 1348 1876 . - 0 ID=cds.g11291.t1;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . exon 933 1215 . - . ID=g11291.t1.exon2;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . CDS 933 1215 . - 2 ID=cds.g11291.t1;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . exon 421 803 . - . ID=g11291.t1.exon3;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . CDS 421 803 . - 1 ID=cds.g11291.t1;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . exon 130 268 . - . ID=g11291.t1.exon4;Parent=g11291.t1 NODE_4203_length_2032_cov_35.4037 . CDS 130 268 . - 2 ID=cds.g11291.t1;Parent=g11291.t1;3_prime_partial=true #PROT g11291.t1 g11291 MDATGAYFSDSSRCFISTVIKSGYSKSGASANCYPMTCDNTNKKIVVTIGSGSSSAFTADCTAAGTITVNKNGYSGTVTCPSYAAFCGGSAAPVKPSTGTTGGSSTGDKGTPAQNSTIPVTPPVTPCPLDIAATCRAAVRSCGSMLDSCRKATIQCGVNGACANSAQVCTSGICTTPAPTCPSWCTSTNFATCSSTTGVCTCYSGYVQSGSTCIQSAPPTPMPATTIDSYEALAGSQTAFTVKCVDTACSANSLQMFGPTTSLMVLRWKNSATLLSATVETTVSMDVTPLSTATVWGIAGRVVDANSYYFLRYEKAGTAGLYFGIASAGSVTKRLVKSFTWPAGETHTLMMIFSGSTIYLQYDDQDLNGFPNLRYTTGGVALLGSGNVVYTEGSISTATTATFSLVGCISDTVFKQRVASILGVDVSAVTIKRGLGESGRCARD # ORIGINAL: g3270.t1 original gene structure, not modified by PASA NODE_4122_length_2153_cov_38.3898 AUGUSTUS gene 1 2120 . - . ID=g3270;Name=g3270.t1 NODE_4122_length_2153_cov_38.3898 AUGUSTUS mRNA 1 2120 . - . ID=g3270.t1;Parent=g3270;Name=g3270.t1 NODE_4122_length_2153_cov_38.3898 AUGUSTUS exon 1872 2120 . - . ID=g3270.t1.exon1;Parent=g3270.t1 NODE_4122_length_2153_cov_38.3898 AUGUSTUS CDS 1872 2120 . - 0 ID=cds.g3270.t1;Parent=g3270.t1 NODE_4122_length_2153_cov_38.3898 AUGUSTUS exon 1 1589 . - . ID=g3270.t1.exon2;Parent=g3270.t1 NODE_4122_length_2153_cov_38.3898 AUGUSTUS CDS 1 1589 . - 0 ID=cds.g3270.t1;Parent=g3270.t1 #PROT g3270.t1 g3270 HPFDVGSGVRLIRFFADNGRIREAVWHFETCQSRLASQSLWWENGAAALAVALNSTASDAGHRFAAACLSARASFRRGDVPDAAAKIHAVDEHAIRSALATVEACVGGISINARALLASLSLAFPAPVLDRNIVAAFDLQAVGANAVDVGFIGWLGKSYWAAIAEPPPVRTWVMAVAPSLAAHWTAACDAMPTHDDLEVFLWSIILGSSDALQLASNTDVASPKVVVDLARAVGTSMSLGESTGREWISMLFPRQFSGELKATLARVRAVDRDGQGDVFFLHWIAEMLTGRSDSLSSASPNEAREFSRKASHYHGAVVRLVDACAYGDERMVSIRQASAFELAQACVRTGELHRALEYFEQIDDYTGRWNCAEVRILLAQRTRDPVIADSHISAARTCLAECKAMSQTEGRPDGDLRAIDDALGRVSEIRSPLPRHSLLASRTPPVTQRRLYVSSPVRHRLDTPKSIYTASSDAKDSSRDSHAISPALSRSIAAVRPMSPMTPLPASILTADATRLRQTQSRIPTGSNAQNLEVSFLDNCDELDRSNSADSTSAPADHNNIHTKNILNTAKAGSWECGTCLVSNKPDSVSCAACQTKRPGAAAAAASPAGPG # PASA_UPDATE: g6398.t1, single gene model update, valid-1, status:[pasa:asmbl_502,status:12], valid-1 NODE_1131_length_13705_cov_66.3393 . gene 572 1902 . - . ID=g6398;Name=g6398.t1 NODE_1131_length_13705_cov_66.3393 . mRNA 572 1902 . - . ID=g6398.t1;Parent=g6398;Name=g6398.t1 NODE_1131_length_13705_cov_66.3393 . five_prime_UTR 1862 1902 . - . ID=g6398.t1.utr5p1;Parent=g6398.t1 NODE_1131_length_13705_cov_66.3393 . exon 572 1902 . - . ID=g6398.t1.exon1;Parent=g6398.t1 NODE_1131_length_13705_cov_66.3393 . CDS 713 1861 . - 0 ID=cds.g6398.t1;Parent=g6398.t1 NODE_1131_length_13705_cov_66.3393 . three_prime_UTR 572 712 . - . ID=g6398.t1.utr3p1;Parent=g6398.t1 #PROT g6398.t1 g6398 MGIIQSAKSSGTFGVLFALVFLASGLVVNFFQLLSCIFLWPFSRDSYRFFNAYLVNFYWSEMVWCAEWWAGVDVKIYGDEQTQKSIGRDSGIALCNHRSDVDWLFGWVIAQKFGCLGGAKAMMKSSSKFLPVLGWSWWFLEYVFLNRDWTRDETVLQKMFAELRTFPLPYWMVIFAEGTRFTEEKHKQSLKFAAEKGLPQLKYHLLPKTKGFVYTFQHLRDGLQSVYDVTFMFPTGKQPTVSSLLQAKPGEVHILVRRFDPKALPTDDKDLAKWCLDLYVAKDGLLEEHERTQTLEGKYRLMPLRKDPFPWYVMTGWTIACITGFILYVARLIAGGHWIALAVTVTLLLASTIVVRIWVTFSQAKRSSTARAAAAAAAKKAD* # ORIGINAL: g6399.t1 original gene structure, not modified by PASA NODE_1131_length_13705_cov_66.3393 AUGUSTUS gene 2246 8578 . + . ID=g6399;Name=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS mRNA 2246 8578 . + . ID=g6399.t1;Parent=g6399;Name=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 2246 3757 . + . ID=g6399.t1.exon1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 2246 3757 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 3934 4980 . + . ID=g6399.t1.exon2;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 3934 4980 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 5140 5308 . + . ID=g6399.t1.exon3;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 5140 5308 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 5532 5767 . + . ID=g6399.t1.exon4;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 5532 5767 . + 2 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 5960 6056 . + . ID=g6399.t1.exon5;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 5960 6056 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 6209 6382 . + . ID=g6399.t1.exon6;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 6209 6382 . + 2 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 6651 6913 . + . ID=g6399.t1.exon7;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 6651 6913 . + 2 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 7035 7283 . + . ID=g6399.t1.exon8;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 7035 7283 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 7395 7622 . + . ID=g6399.t1.exon9;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 7395 7622 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 7931 8061 . + . ID=g6399.t1.exon10;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 7931 8061 . + 0 ID=cds.g6399.t1;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS exon 8179 8578 . + . ID=g6399.t1.exon11;Parent=g6399.t1 NODE_1131_length_13705_cov_66.3393 AUGUSTUS CDS 8179 8578 . + 1 ID=cds.g6399.t1;Parent=g6399.t1 #PROT g6399.t1 g6399 MAKTGHKAVGTAAQPEVHADAVAPMQESTQVTANVTADATEVDGGGLLGLFWNLAAIEEEKRALAAAQLVRLVVSLQQARDARVSPEERKKKNSKQKDSHEGKPDATKEDVDPLSPWACDEIGYSLKRLVRGLGSSRDGARQGFALALTLLLEAVPRIPADYVLSLVPRSIEITGGMKGREERDAQFGRAFAYAAVIRSGRLFDDASREELSLAVKELVALSRKKSYLRELSTEAVAAAIEGVSAESFEAAILPHIDALVSAPLDEQTPESLSLALCAQRRHPRAVGPACVPAGLHCPSDIAHPSNYKQIAPILADSPTFAHPNVHSVWQRLIDAVLSPPAQGIDATNIATNITGRVQDAWRTLIDDSLLDSTKERKYLGFRLFEILLKRLSADDGDATRAVPLLFTPNLMRTLINNASTKDNYLHKSARRALQSVVAVATAKECGASSRLAVLAGLLGAHGNTQFDRLTGTKTVQSIVAELDNAGVAAYVDYLADVFLKQAVLGEGYPGDDEDAEAKASEQRRVHARREWAVDQLLSIVRNTRVPKTDAVLLRIVRFVATHSVLSVVEPTDDPAFPELSSAARPPVSLSTRTMCRQRLGGMLAELGARSPRSKVDDVKSADVKAPIDALAGGAHIEGTAEDGEFWVRHVNEFVRTATARFARAATPEATATPKKGKSARKDERPRGVIAFAETPSVDANAAMDALAVALADVRRRLSTDTKATPATPKKSKSDAVKTGAASEPLTKSLRIQLRSFELLFEHVWLRLLIEPADFVPVVAELERCYAEAMNPPATSAKTKAKNPSKKGKAEEKQTNVEDGDDSDERPSPVEVLADILLSFLAKPSNLIRVVVEQVFRAFCGELTPRALKLFTDVIQARDNKPGEEDLFETIDDDENGDDEAAIAMDAAAEGSEDDESDVAEEEDDEEEGGEDGSDAEDDDVSGDDVDSDGSESGEDAPVDPEFRARIKAALGPAAVDSDDEKEGDDDSSEEEVYNDEQMTQFDRVLEDIFKHKKAMKQEKRDARRNVLHFKMRVLDLVDIFIRRQSQNPLLFELITPLLEAARATANAPTAVVLHERILGLVKNKLCRVHHVPKLPALDVDRACDILAQTFESAKHASSGPLLSLATGCTALVLRGVLGGFAGPSAPAAAPAPTPKKKGKTASAAPQVPAVPAHVTRAAALFRDALVDFATKKSSHFQTQFFSDIAQRFPALVWLALPSVSETVAAAANSYRAAQVFHVLALLIKQRSGLGDKNVQLTSHARDFEHAIVAFLSTAGDATAAGDDESDGGNDTARAAKAKAKAKHLREPLVFALALVHLLQRTPDVKLGDVLDVNSVVTSVSAVHDAWDEQSPALGAACRQLLKALGVAVSAPDRKRKRPVKTEATSGGKKDKKHKKDKKRDNNAKNGSKATAPVKTGGEAKQPTPSSAKQGKKEKGGEKDKPPHKRPRTDDSKTAQPASSGAGSGKEGNTGKAPQRKRTASESEKTQAGSTMQALKKQKASA* # PASA_UPDATE: g6400.t1, single gene model update, valid-1, status:[pasa:asmbl_503,status:12], valid-1 NODE_1131_length_13705_cov_66.3393 . gene 9426 13545 . - . ID=g6400;Name=g6400.t1 NODE_1131_length_13705_cov_66.3393 . mRNA 9426 13545 . - . ID=g6400.t1;Parent=g6400;Name=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 13164 13545 . - . ID=g6400.t1.exon1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 13164 13545 . - 0 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 12841 12968 . - . ID=g6400.t1.exon2;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 12841 12968 . - 2 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 12342 12499 . - . ID=g6400.t1.exon3;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 12342 12499 . - 0 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 11998 12115 . - . ID=g6400.t1.exon4;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 11998 12115 . - 1 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 11644 11767 . - . ID=g6400.t1.exon5;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 11644 11767 . - 0 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 11397 11474 . - . ID=g6400.t1.exon6;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 11397 11474 . - 2 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 11077 11205 . - . ID=g6400.t1.exon7;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 11077 11205 . - 2 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 10735 10840 . - . ID=g6400.t1.exon8;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 10735 10840 . - 2 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 10278 10569 . - . ID=g6400.t1.exon9;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 10278 10569 . - 1 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 9974 10139 . - . ID=g6400.t1.exon10;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 9974 10139 . - 0 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . exon 9426 9698 . - . ID=g6400.t1.exon11;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . CDS 9562 9698 . - 2 ID=cds.g6400.t1;Parent=g6400.t1 NODE_1131_length_13705_cov_66.3393 . three_prime_UTR 9426 9561 . - . ID=g6400.t1.utr3p1;Parent=g6400.t1 #PROT g6400.t1 g6400 MQSPPGADCGFNVHKACMGLALSCHAAKLAVELSQHVIESEGQLRMVSDFLASRVGGSVLMEGGGKDMSESDRLSQLALSEFQRHLVMQASMALHSGSFKRQTLGELAEVFRILLRGVIREQSPQPTDPELAVAAGIEAFSVLMSEAVAILKQVETTKGGTIRGSLRGTTVLSKLKKLAVKTKNVEHNGHQFVPTQYHIPTFCETCGQYLWSLDKGYTCATCRHTCHLKCLQKTTVVCDATKSSSGALDTRSPLPSSAAGGVQQHAVSTSTTLFGRDLEEIVRREGRLVPLILETCIHVLDQKGLFSQGIYRLSANHAVLKKIKARLETGVAEGGLENEEVNVAANILKTWLRELPNPLLTTDLYEYFIRSAEIEDPSSRQSALVEIVSRLPKIHRDTFAALLCHLVRVAQHSSVNQMTTSNLGIVFGPTLLRPPGHVSALDSLTDVGKQARVVECLLDSQISKNKLVWADVGVIEEEQRYTAHVLEIYNGAKGVSQYNQAELEKAIADFTVAQEQLDEEKVCLVLELQSLEAYQRSHQMNAIMTRRDELSDRPVSIDLPAIPSRLVHLNKSRPKPAAHKARPGRRPGTRPQSTYTADGLPEEDD* # PASA_UPDATE: g1353.t1, single gene model update, valid-1, status:[pasa:asmbl_4139,status:12], valid-1 NODE_2360_length_6585_cov_40.6857 . gene 60 4896 . + . ID=g1353;Name=g1353.t1 NODE_2360_length_6585_cov_40.6857 . mRNA 60 4896 . + . ID=g1353.t1;Parent=g1353;Name=g1353.t1 NODE_2360_length_6585_cov_40.6857 . five_prime_UTR 60 61 . + . ID=g1353.t1.utr5p1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 60 275 . + . ID=g1353.t1.exon1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 62 275 . + 0 ID=cds.g1353.t1;Parent=g1353.t1;5_prime_partial=true NODE_2360_length_6585_cov_40.6857 . exon 457 905 . + . ID=g1353.t1.exon2;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 457 905 . + 2 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 1162 1455 . + . ID=g1353.t1.exon3;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 1162 1455 . + 0 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 1696 1888 . + . ID=g1353.t1.exon4;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 1696 1888 . + 0 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 2184 2358 . + . ID=g1353.t1.exon5;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 2184 2358 . + 2 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 2511 3221 . + . ID=g1353.t1.exon6;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 2511 3221 . + 1 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 3523 3747 . + . ID=g1353.t1.exon7;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 3523 3747 . + 1 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 3935 3995 . + . ID=g1353.t1.exon8;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 3935 3995 . + 1 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . exon 4260 4896 . + . ID=g1353.t1.exon9;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . CDS 4260 4610 . + 0 ID=cds.g1353.t1;Parent=g1353.t1 NODE_2360_length_6585_cov_40.6857 . three_prime_UTR 4611 4896 . + . ID=g1353.t1.utr3p1;Parent=g1353.t1 #PROT g1353.t1 g1353 KPVCKDENATIHASVASDLFPYAACKAISTLNMTGYSDDSPQPLDVVAIGSLVIADTTLRDLAFLRSLERVEGDVTLARNARLRSLADLSSLTSIGGSMHISRVFSSLATLDGPSKLRTISGDLSLVDLNGPTAVEGLQSLRSVGGSVVVERTTLTDLSHLAIASIGGALRVTGNDALVRFITPQSLKKAVGVADAEERVRYGSIQCTANPNACIPQEIIMSIRVANADSVAISGNAPANSSYCIATSVSFTAVTAGDVDAAKTVTEGVRAVLNRTDWQLGDIRLAGDAANSVVDKMLEVVQAAKSGAQSGLPAILTEAVSANIFSSIDSVLNPSNLNVMRTTKASNNLASIVRQLSFALSASAPCGSQNNFTASRLFMKGMKDDPDNFGNLTHTSGDGFSSSFVVPPGLKSELGIGACLTASFSVMSADPFVPAANASSLRPNSDVVTMTFENIDVSGLPLSKSFVFTITMKNASTPSALCGYWNDTLQSWQTDGCAVLARNGRDVTCRCSHLTSFGILFDTSSGAGDAIPTADRKALSYLSYIGCSLSIVGCFLTIVAFVVIPRLRSVPSLIVVNVCVALIVVNVVFLAGIDKTSNEGGCKTVAIILQYGLLSAFAWMGLMGYNVYRGITTVDIRKGTSLRKREYILGYIVPLVYIVACVCADAIMGGSIEYGGDSRCWISSTGGLIGAFLVPVGIIILVNTVVLVCVVWTLHATKHTRSGGSALGDRTSVVKDVLVYVTLLCVLGCTWAFGYLGLFHYGFLYPFVIFNSFQGVFIFVSFVLRARVWAACKDRLSVDYFAGKNSGISSKTSVGVSRIDSSGYMADEYAEISYMNPIASAGAVVGGGNMALIHNTAFDVADDADLGNSAPSRAHASGDGHLGRTRSLYV* # PASA_UPDATE: g10881.t1, single gene model update, valid-1, status:[pasa:asmbl_4964,status:12],[pasa:asmbl_4965,status:12], valid-1 NODE_2768_length_5173_cov_40.4072 . gene 202 4189 . + . ID=g10881;Name=g10881.t1 NODE_2768_length_5173_cov_40.4072 . mRNA 202 4189 . + . ID=g10881.t1;Parent=g10881;Name=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 202 359 . + . ID=g10881.t1.exon1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 202 359 . + 0 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 627 843 . + . ID=g10881.t1.exon2;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 627 843 . + 1 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 1079 1199 . + . ID=g10881.t1.exon3;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 1079 1199 . + 0 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 1394 1471 . + . ID=g10881.t1.exon4;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 1394 1471 . + 2 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 1621 1760 . + . ID=g10881.t1.exon5;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 1621 1760 . + 2 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 1893 2043 . + . ID=g10881.t1.exon6;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 1893 2043 . + 0 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 2228 2346 . + . ID=g10881.t1.exon7;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 2228 2346 . + 2 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 2663 2728 . + . ID=g10881.t1.exon8;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 2663 2728 . + 0 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 2935 3155 . + . ID=g10881.t1.exon9;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 2935 3155 . + 0 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 3333 3451 . + . ID=g10881.t1.exon10;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 3333 3451 . + 1 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . exon 3803 4189 . + . ID=g10881.t1.exon11;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . CDS 3803 4047 . + 2 ID=cds.g10881.t1;Parent=g10881.t1 NODE_2768_length_5173_cov_40.4072 . three_prime_UTR 4048 4189 . + . ID=g10881.t1.utr3p1;Parent=g10881.t1 #PROT g10881.t1 g10881 MDLFTRRRIDTVSKIDLEITQRCEAVLASDPTLQPLSRKPAITAAMKTVLSYKHAVRGFISEPEVLLCVPLVYAHLRHVESFAKTSASLAGDDAVETTEFNTDLIADLVERYFALMDVKPAYTGHVNSQETHRGLEPLCQAIDRLVGECDSELKLLMERAVLVEAEAQGKSKTFVEWLGDLFLPILQRMFVGTLNLDVVCYVWDQYLIASDVPSADPLPYFCAIIFLLLRGSVAKCTTGTAIASILEQHARQLSLKQFRQMMHARFRDRIVQRLRDAEGEGPEIDPIIDSDVLPPWVHWSKDVVKARDKPQKKTPKLQVHIPPPGDLASGLPSRTSLAGSIDMLSPTADGRSKKSKKPAGSPSSTRAENNPLSPPPIDAASVRSSISHLEQAIAADGAAIDGQLNEASIAHGLGSQGSIPQQSSIVGSKSSLRSRRSTREPAEIDPAQLIAEILGAVVADVKLVASGNAAHRLELDRATLAMLRLRRTDVSEARREVLRRKDAVTDADWAKLAGGRRPELDKEVERLVDRARKQRHVTATAPKR* # ORIGINAL: g10882.t1 original gene structure, not modified by PASA NODE_2768_length_5173_cov_40.4072 AUGUSTUS gene 4624 5043 . - . ID=g10882;Name=g10882.t1 NODE_2768_length_5173_cov_40.4072 AUGUSTUS mRNA 4624 5043 . - . ID=g10882.t1;Parent=g10882;Name=g10882.t1 NODE_2768_length_5173_cov_40.4072 AUGUSTUS exon 4624 5043 . - . ID=g10882.t1.exon1;Parent=g10882.t1 NODE_2768_length_5173_cov_40.4072 AUGUSTUS CDS 4624 5043 . - 0 ID=cds.g10882.t1;Parent=g10882.t1 #PROT g10882.t1 g10882 MIRDGMGSSASIHSNVSVNSMIGGVHDVSVPLSRLKQEIQSLERIVRLQHKNAERLEDKIDKMYEVMQTFLARSSAPGGGVASGGHGIDNSGDNNSGEQGGANKNGSQPEILAPVKANKSVRISPLADSDIIPPIEPRI* # ORIGINAL: g7593.t1 original gene structure, not modified by PASA NODE_1487_length_10990_cov_39.7971 AUGUSTUS gene 238 10900 . + . ID=g7593;Name=g7593.t1 NODE_1487_length_10990_cov_39.7971 AUGUSTUS mRNA 238 10900 . + . ID=g7593.t1;Parent=g7593;Name=g7593.t1 NODE_1487_length_10990_cov_39.7971 AUGUSTUS exon 238 10900 . + . ID=g7593.t1.exon1;Parent=g7593.t1 NODE_1487_length_10990_cov_39.7971 AUGUSTUS CDS 238 10900 . + 2 ID=cds.g7593.t1;Parent=g7593.t1 #PROT g7593.t1 g7593 KTTVFQLFAALTGRRLHIINCHQHTETADFLGGLRPSRGKDVVGSALNEAIAAFTALVPPSMLGDGHDVSRPAELSDADAIGDHIAMYERVAPRVRRSPEGSAGPLLAACARVDALLADYRSLFSWVDGPLVQAMRDGDILLIDEISLADDSVLERLNSVLEPARLLVLAEKGATGDEDIVAADAFRIVATMNPGGDFGKKELSPALRNRFTEVWVPTTDDRSDLRSVLVGNFASTSTADACADVMLDFVEWFRSELAPRLTVSLRDYLSWVGFVSRMESLLGSAAALVHGACLVFLDGVGAGSSGSVDPVVARHRALVWFRDRIPAARDAISQSFPEVACASTAPDVSITWDSSQASSSALTVLATDTSFGVAPFVIERGPTPGNPRFALNAPTTCRNLQRVLRGMQLRRPILLEGSPGVGKTSLIMALAAASGHAVVRINLSDQTDVMDLFGSDLPVDGGKGGEFAWRDGAFLRGMKDGVWILLDELNLAQQSVLEGLNACLDHRGTVYIPELDRTFECSPNFRVFACQNPTQQGGGRKGLPKSFLNRFTQVYVEPLTDADLECIAVEMYRNIPRDVISAMISFNGRLHTETMVQSAFGRRGAPWEFNLRDVSRWCEAMEAAQGPGTWDAGQFLEVLYIQRMRTEDDRNHVRALFKEVFGMDAPAAVTSRFIVGPSSIELGSAVLPRRRTLLPGGDASQGSWDILHWQLPALESLMHCVGLGWMSIVIGPSGVGKRSLVRLLSRMTGNTLREFSMNSGVDTTELLGGFEQFDVNRHARALITDIERAVIAASDVALHHVVSSAPAARLQLAEMLGGIHACIARMRAHASVGDVTAEIGACLGAVRSLCTHFALDAARFVGSGIDLRVEALSAMAGETSESRAGSFEWVDGLLVQALERGDWVLIDNVNLCPSSVLDRLNPLLEPNGVLSISEAGVVEGAVRTVRAHPSFRLFMAMDPRNGDISRAMRNRGIEVCVLDPPDDAERDFKILSVRNGLADGDAATALARFHRGMRDTPGSCDHPLSLREYVDAASTARAELEVGVSSSHALASAVEETYISTCRSARVQAVLRAQVETALVPTCGGHKSLLDAGVWPRGAFGALPARDHVMASVESDGRVALFVALSIARGASAASFAHIAHSLLQSAESLGRAGTFGAVFALSSNAIAALFGCIRSEGLHSNPAKSAELSAIARWLKHALAHFVERATPSDWALRVTWLECHVLPLVENAAARVEVGAAAARLRAKFTHVLCGDLLDRRAALYGMASREDALWSAPRTLAHLPLDLTLGEHCVHRIRVRALASVLSCGASGDNDIKRSFDALYAATFASQMRLDLAADRAARSALESTAYQASRGRAVGELSPAQQSFCCYVDGLDRTQTSHPSIAWMYPLFSAFDAIVAESALSLSVHPLPSFIEQTARMCKLRDALWDAASIVPASSAIASVRVAWRWMRKDFRRYLAGLQETMPGSPSGPMLAGAADKLDASLDTAGEDACGSLVLWKKGGHPRLLRDARLLPVLSSFAAMVNRLDVHTRTERGNGVADAFVQPESTLTSDRHHEVWLWAETVARGETDASGATPALRQQLVEGVASVFVADEVGVDSEAGMRLVTALEGMATSLARSLDALVAAHRPPPLVLPKAIEGNELLVVDAADVVAPPIVPETIGMWPILDYGATILELKAVADLTCAVGNLLVSGPGGRVSDALVAAAECISAFIATAVNTLARPPSELVAYRRLVWVISELGSVATDATATAKCVTLLLALVSDVRRSFHAHVWRNTFNDLSFTVWKPPVAAFDAIARSATTSTLLADDLSASQLPAESSFGSARLSDGVRTGFTMPLIANARNAGIYEHSARVAELSLLVQHMWTEAATVPFSTGFVAKAEWTLASNAITILVASFAKYLPAGACTMFAACVNALLAGIVQSESVTSSTLSDARKASTDAKRILGTCTHPGFIRLAVPMAVRLVDALLERVTCATFSSPSSQSDALMRSRVWVLIGCVQLVLVRIASPVDPATKAAIQLARIRSEIAELSDEIDARTQIERVETGRGTNKRIDDASSRVRSLGERADALALQCVLRPDPPQFADLHAEMTHFSAAIAEPSRLCALADALIDAVMSRSSSRDVDTHTAPSALLREESLFQSSATQFENRLDRRFPMYRDVWQPTCVALADVRFGLRLAAAHVTAPGDIAPEVAEAAEKVAVNMASFASGTLSPSDLTRTLGAADAVARAEAARHVIRVNSASKSNASATGVLSAADRIAIENAAKVRHAVLRTFLSRSQHAGRGGPLRVGFSAATSETHATDALRVIEHYVTDWEAQERADAERAVREGELFKYRQQKHEGSESAAKAEEERSYAEMFPSYEEAFVGLDGDVNAAFDAGEASESQGMRLRRLQEEKRMEKERSPPSTRISPEDLAVVVGVHASLFATQRPRTHMPFPSDDEVLDCLVRGYNAAFLVIRGLGGRPPSHMDRTLLSSHIVRAKQERDYITAASTRGGVDAKVDARPHATQVDAVALACATPRTLLVAEADKYNVYVDANVPEVRLALTPLSVLDRRIRELLLEWPEHPVLQSLLQMADRMMSFPLSSPVVKMALGFEMLLRRAQDWEQYAAKRVSLAPQLEGVTALIVRWRKLELKAWLFALDSKRREFDTKAFELWFHMYRLLKTSPLREEEDACRGGIDGNVGDSAAPARDRLPSEDPAFGAHLTSIFESVERFMQSAPLGQFSPRLDMLRAFAGQCAAEVVSMKQGGTAASDDLLRYRTQLAHTVDSFCRYYGQLQPAVEGHIARGRGPIEKELKDFAKVARWNDVNYWALKDAAEKAHRTLHRLLRKFGEVLSEPVAPILSTAVAALASGGIAESAGMMPTHEDSVPVSSTTNPVVSATIDASAAFVAAQSLIAGDVGASLLETEEQGSLLSRVPQLHTRMQAHRAKGRFTPSTDDNVSSLDSFASAVAGRVKELREWSPPSATTADSEETKKARVRAVHHQQQIKRVALADLLKMLRRLGLSFRSSSARKYAKSIDIFALPRPSLDSAGACTLAAIVRADVHYFKAVAGLHALRQASMSPSKELGSATSQRCVGYAEHAFVAMASQRQLMADVVAELTAFAAFTADTHRSVSACCAPSRDGHVLPPQAFVAQWARVSALALERVRDATQRAAIVLKAVVTSAGDATGEAARALSDVNAAHDRVKEMCISLGAVVDGGRCVLHFAPDFAILVACLHASPDVAAALAPAITSMHSRGVLDDVATAVSSVVTLSTAFDKECIVRFGERTTRGDHSAMSARIKDASESVLHHVLVALQKLREAKDAEVTALRKNDVAPEANDAAAGDVDANVGDDGLDAWGIADDHLLVTHRQLLNMARALDLPSLNTKCALLRDVTKEASETGDAVAVEAAVAMCAVAPIVGEYGTVLDGVVSRMATLHKATCKLGRILLSVFGDLLSSGFCTPSDVEQENGDGESTGELQGTGIGEGKGGKDVSKEIENEEQVLGTRDDKPPEEDAEDEVAEEDDGLEMKDDFDGRLYDVEAKEDDDDKDDKDEGEEDKDMDVQMGELDQK # PASA_UPDATE: g6355.t1, single gene model update, valid-1, status:[pasa:asmbl_5350,status:12], valid-1 NODE_2982_length_4609_cov_36.1846 . gene 229 4394 . + . ID=g6355;Name=g6355.t1 NODE_2982_length_4609_cov_36.1846 . mRNA 229 4394 . + . ID=g6355.t1;Parent=g6355;Name=g6355.t1 NODE_2982_length_4609_cov_36.1846 . five_prime_UTR 229 229 . + . ID=g6355.t1.utr5p1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . exon 229 379 . + . ID=g6355.t1.exon1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . CDS 230 379 . + 0 ID=cds.g6355.t1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . exon 688 878 . + . ID=g6355.t1.exon2;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . CDS 688 878 . + 0 ID=cds.g6355.t1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . exon 1115 1307 . + . ID=g6355.t1.exon3;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . CDS 1115 1307 . + 1 ID=cds.g6355.t1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . exon 1536 1653 . + . ID=g6355.t1.exon4;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . CDS 1536 1653 . + 0 ID=cds.g6355.t1;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . exon 1912 4394 . + . ID=g6355.t1.exon5;Parent=g6355.t1 NODE_2982_length_4609_cov_36.1846 . CDS 1912 4394 . + 2 ID=cds.g6355.t1;Parent=g6355.t1;3_prime_partial=true #PROT g6355.t1 g6355 MSTGRQQLIESLNIELVPFVPGLASKSDGMGGVSLDHQQPFVHVYLVNCDDVDVYKQTVKGKIQSWLNYFKDNSKIEWLIIYVDRRGPGQKMPKLQLRSVFDKLKSDFASKPERCVQLRIADGDSKSDETWDDVINKMRDSVLACFDRRVAQYEEDIKRTLGNRQLPGWNFLNFFILKEGLAYAFEMMKLYEEAFFQYVELEFLYRQVEATDKSQLGGKLPVMEWFGGTDAGDDSGSVLDLTRKPYREMIRRNTIKSFDFRNYLFACQFRLLLHLGRPVEAAERAHAFALVVGRKLRENASRLMRHFAESWTFSFCTEVVAECDHAVAQLSPALEGDLRARYQMLRGDLAYTARKRLDALGIAYGHLPRELPFSLNAGSNAISAVPPAPASSEPPTAPTASTTALGVPASTATAPAGDAKATAFSSVNDPLGAHSGGGEGDEEPMTLYPPIAGGIAGTDAVAKISNAQLVSATATAVEFDRLYEELSQMASESYAAANRQRGALRVNRDLGALRFCRKEFARAEWYYATAHRTYAEDGWLSLDYDIRKDLAFCQRNLGKLEDCVDSYASLLAPASSLTVVERQATFDDLIVIAKSDLKSMYALAAGPLLKPTVVAARKVDANQPDDLQLSQSQMATTVEEGSAGGIEGATTTTTATTIAAASTTKITALEAGRMARFDIGDAIEIEIAVDSLLPGSLVCERAGLALARRDVSSVMSAAGPAGMLDNMSLGPASRRPSEVSVSPSRVRAETEESTRPPPVIASAAAISASSAALAPASPVLSGVSAQLSAVAELTSAGEDGVATDNRRSTHDSARSMGMEIECVDVHPGPNNTILFSGIVTCGGDFVFDRIWVDVGNLRLTRSLGPTDGLRGLSFGPTRSSVTVEVFLPPSTALIAGSPVNMNIAIRTNADSITGGTLEVSSSTGLRIDAVPSGLLSISRPLSQQQQQQLQQQAAASELGASLGADGLKRSGGALLTPGKASRGSIRRTSVTPLPVAPINAVQAGVSRRIPFSFSDGVLQLPECGPNEVVEFALPVYANDKELKHK # PASA_UPDATE: g1445.t1, single gene model update, valid-1, status:[pasa:asmbl_5025,status:12], valid-1 NODE_2799_length_5094_cov_47.2495 . gene 121 3353 . - . ID=g1445;Name=g1445.t1 NODE_2799_length_5094_cov_47.2495 . mRNA 121 3353 . - . ID=g1445.t1;Parent=g1445;Name=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 3148 3353 . - . ID=g1445.t1.exon1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 3148 3353 . - 0 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 2229 2809 . - . ID=g1445.t1.exon2;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 2229 2809 . - 1 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 1899 1954 . - . ID=g1445.t1.exon3;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 1899 1954 . - 2 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 1424 1676 . - . ID=g1445.t1.exon4;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 1424 1676 . - 0 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 1162 1194 . - . ID=g1445.t1.exon5;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 1162 1194 . - 2 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 665 762 . - . ID=g1445.t1.exon6;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 665 762 . - 2 ID=cds.g1445.t1;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . exon 121 370 . - . ID=g1445.t1.exon7;Parent=g1445.t1 NODE_2799_length_5094_cov_47.2495 . CDS 121 370 . - 0 ID=cds.g1445.t1;Parent=g1445.t1;3_prime_partial=true #PROT g1445.t1 g1445 MCVLLLSRGGLHIATVVCVILCVVSLACTAVVADGASEYAPKDAVVRQSRFGTQFAGKPIGADGIDAGRPSDVDVEVECGMRIAAWEYARMILPERGPNMAVFDGLRLGPYCHKARPTDEEHSPIMRANILAASKGYIADSHPTVGPALYVDAESGLDAPGRGSLGAPYRSLSFALTQSRALRPMIPPGVTLEILLRGGLYIVPDTIFVREMDSFLVIGAYGDEEPVMSAGCMLDKLQWKKVDAPASPGAEAANESNIYVANVASHNCGQFETLFVDGRRAAKSWLPPVKSPPAIEIHIDNLSRRNLFSTFSVGIGGSVSQFDPPVSYYAPREPIARGVTYAIATGLTYNDGDLPPNRTYAHPETGIVHTFHHLHWGGWQFRIDSHEPSTRTFKWSYGGFQEARGHSDGGVEYYIENLMEELDSPGEWFLDYATNNLYYYPNATDFQSSVFVASRLETIMSIEGSMKAPVRNVSVSGLTFTHTAPTFLKSYE # PASA_UPDATE: g4298.t1, single gene model update, valid-1, status:[pasa:asmbl_6380,status:12], valid-1 NODE_3666_length_2994_cov_40.6978 . gene 1871 2898 . - . ID=g4298;Name=g4298.t1 NODE_3666_length_2994_cov_40.6978 . mRNA 1871 2898 . - . ID=g4298.t1;Parent=g4298;Name=g4298.t1 NODE_3666_length_2994_cov_40.6978 . five_prime_UTR 2837 2898 . - . ID=g4298.t1.utr5p1;Parent=g4298.t1 NODE_3666_length_2994_cov_40.6978 . exon 2751 2898 . - . ID=g4298.t1.exon1;Parent=g4298.t1 NODE_3666_length_2994_cov_40.6978 . CDS 2751 2836 . - 0 ID=cds.g4298.t1;Parent=g4298.t1 NODE_3666_length_2994_cov_40.6978 . exon 1871 2335 . - . ID=g4298.t1.exon2;Parent=g4298.t1 NODE_3666_length_2994_cov_40.6978 . CDS 2113 2335 . - 1 ID=cds.g4298.t1;Parent=g4298.t1 NODE_3666_length_2994_cov_40.6978 . three_prime_UTR 1871 2112 . - . ID=g4298.t1.utr3p1;Parent=g4298.t1 #PROT g4298.t1 g4298 MDKADAKRKQKSDAFRQEREAKRDAIRAKYGLKKEEAPVEEAPAAPAPDAKKTKGVNNIVSKQSGADKDKGDSKGAADKGRASGDSRDDAKEPAKDDKCAVM* # ORIGINAL: g4297.t1 original gene structure, not modified by PASA NODE_3666_length_2994_cov_40.6978 AUGUSTUS gene 276 1210 . + . ID=g4297;Name=g4297.t1 NODE_3666_length_2994_cov_40.6978 AUGUSTUS mRNA 276 1210 . + . ID=g4297.t1;Parent=g4297;Name=g4297.t1 NODE_3666_length_2994_cov_40.6978 AUGUSTUS exon 276 1210 . + . ID=g4297.t1.exon1;Parent=g4297.t1 NODE_3666_length_2994_cov_40.6978 AUGUSTUS CDS 276 1210 . + 2 ID=cds.g4297.t1;Parent=g4297.t1 #PROT g4297.t1 g4297 EDACKKTLRVSRRYGYAEVDLDLFSALAPSVATRVLMLVVGSMGASERPGRAIGRMASIFRERNFHPGGNVFGGAVAISGSHSGAQVPHKAMFYTPAEDIHSEAVVTDGPFASIPVFSPMHLPKSAAKGRYPPMPSHPGVALVMRHLHTLSEMGPIPLPAEAMDERVGFVWDKRWNIKLLRKDALSSSPLSGTQRRTGSHLQAPVDDVRCVDGIVHARGRPLYVCNINDKLMARLSASLLFIRAPRLVAMGLPVVVDGDWKIIAIPDVGVCQIFGYRVTATFQPRRLFPECPFIFPPEVPVPRSKGYRRY* # ORIGINAL: g11069.t1 original gene structure, not modified by PASA NODE_3719_length_2903_cov_35.0934 AUGUSTUS gene 1277 2760 . + . ID=g11069;Name=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS mRNA 1277 2760 . + . ID=g11069.t1;Parent=g11069;Name=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS exon 1277 1378 . + . ID=g11069.t1.exon1;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS CDS 1277 1378 . + 0 ID=cds.g11069.t1;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS exon 1515 1617 . + . ID=g11069.t1.exon2;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS CDS 1515 1617 . + 0 ID=cds.g11069.t1;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS exon 1908 2016 . + . ID=g11069.t1.exon3;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS CDS 1908 2016 . + 2 ID=cds.g11069.t1;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS exon 2275 2360 . + . ID=g11069.t1.exon4;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS CDS 2275 2360 . + 1 ID=cds.g11069.t1;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS exon 2582 2760 . + . ID=g11069.t1.exon5;Parent=g11069.t1 NODE_3719_length_2903_cov_35.0934 AUGUSTUS CDS 2582 2760 . + 2 ID=cds.g11069.t1;Parent=g11069.t1 #PROT g11069.t1 g11069 MEIVLTLRASCDGDPMQAAHPADSLRALARDSSADVLSREFAKSLDAKDELSKLRANFCVPTVRQLPNTSDVDGDCIYMCGNSLGLQPRTTRTLVNEELDKWARRGVIGHFDDSARPWADIGDVCLEASARVVGALPSEVVVMNSLTVNLHLLLVSFYRPTSSRFKIILEDKAFPSDHVSALLCPVALLVVF* # PASA_UPDATE: g10605.t1, single gene model update, valid-1, status:[pasa:asmbl_7824,status:12], valid-1 NODE_5041_length_1059_cov_27.6148 . gene 197 957 . + . ID=g10605;Name=g10605.t1 NODE_5041_length_1059_cov_27.6148 . mRNA 197 957 . + . ID=g10605.t1;Parent=g10605;Name=g10605.t1 NODE_5041_length_1059_cov_27.6148 . five_prime_UTR 197 198 . + . ID=g10605.t1.utr5p1;Parent=g10605.t1 NODE_5041_length_1059_cov_27.6148 . exon 197 553 . + . ID=g10605.t1.exon1;Parent=g10605.t1 NODE_5041_length_1059_cov_27.6148 . CDS 199 553 . + 0 ID=cds.g10605.t1;Parent=g10605.t1;5_prime_partial=true NODE_5041_length_1059_cov_27.6148 . exon 791 957 . + . ID=g10605.t1.exon2;Parent=g10605.t1 NODE_5041_length_1059_cov_27.6148 . CDS 791 957 . + 2 ID=cds.g10605.t1;Parent=g10605.t1;3_prime_partial=true #PROT g10605.t1 g10605 LGQKGDFIKINWGHSYIAVRANSSGNPVHALAGSVASRFSFVANTIPPTFDTRRPRRCDDDWISLSLRWDFGAVLPGSPVSAYHLIAYDQVASIDYFGEQLTPYWKQMYGSIEDLIWDVSNRYSELHAAVEAYESTVLSSLFAAGGAKYATLGALAFRQTTGAMVVVWSAKRNQ # ORIGINAL: g5161.t1 original gene structure, not modified by PASA NODE_3002_length_4558_cov_36.0957 AUGUSTUS gene 1304 3503 . - . ID=g5161;Name=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS mRNA 1304 3503 . - . ID=g5161.t1;Parent=g5161;Name=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 3337 3503 . - . ID=g5161.t1.exon1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 3337 3503 . - 0 ID=cds.g5161.t1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 3066 3159 . - . ID=g5161.t1.exon2;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 3066 3159 . - 1 ID=cds.g5161.t1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 2780 2894 . - . ID=g5161.t1.exon3;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 2780 2894 . - 0 ID=cds.g5161.t1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 2433 2614 . - . ID=g5161.t1.exon4;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 2433 2614 . - 2 ID=cds.g5161.t1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 2059 2186 . - . ID=g5161.t1.exon5;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 2059 2186 . - 0 ID=cds.g5161.t1;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS exon 1304 1718 . - . ID=g5161.t1.exon6;Parent=g5161.t1 NODE_3002_length_4558_cov_36.0957 AUGUSTUS CDS 1304 1718 . - 1 ID=cds.g5161.t1;Parent=g5161.t1 #PROT g5161.t1 g5161 MLLALALEIPSWVITLLILGAVSFLMFGTQLLDLIVLWVIANNGRAGRLKTDRKARLHAYVVRSELLDFIAINELYVLARDMVDADLVGVDLFHKYVMSYKYTLIFRDRLDGSLRGMMLISPEHGVSSDGRRYIYIKCGMGLFKEEFRGGPLFYLVGFYFLLAEMLMHPLTPIYVVYKSFSVKSYQLALRNFQDVFPRYDKPTPAWEKSVMDEFGRNISSEKETYDADRCVVNREVSHLRQGVVKLTPEDLRDPHVQYFLRVNPGWEKGHLLISLCRVRWSDVALITYNVIRRAFRVLASSGLRAAGFSRVSRRVLGSISVPNWDNEAELETRQRSQSFGERVKSARVQHVDVMSSEAIVGSTATQ* # PASA_UPDATE: g1589.t1, single gene model update, valid-1, status:[pasa:asmbl_3674,status:12], valid-1 NODE_216_length_31026_cov_42.897 . gene 18526 23784 . + . ID=g1589;Name=g1589.t1 NODE_216_length_31026_cov_42.897 . mRNA 18526 23784 . + . ID=g1589.t1;Parent=g1589;Name=g1589.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 18526 18689 . + . ID=g1589.t1.utr5p1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 18526 18771 . + . ID=g1589.t1.exon1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 18690 18771 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 18924 18988 . + . ID=g1589.t1.exon2;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 18924 18988 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 19185 19389 . + . ID=g1589.t1.exon3;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 19185 19389 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 19596 19813 . + . ID=g1589.t1.exon4;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 19596 19813 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 19975 20074 . + . ID=g1589.t1.exon5;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 19975 20074 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 20250 20453 . + . ID=g1589.t1.exon6;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 20250 20453 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 20608 20750 . + . ID=g1589.t1.exon7;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 20608 20750 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 21012 21177 . + . ID=g1589.t1.exon8;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 21012 21177 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 21306 21349 . + . ID=g1589.t1.exon9;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 21306 21349 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 21591 21693 . + . ID=g1589.t1.exon10;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 21591 21693 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 21848 21988 . + . ID=g1589.t1.exon11;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 21848 21988 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 22150 22266 . + . ID=g1589.t1.exon12;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 22150 22266 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 22412 22606 . + . ID=g1589.t1.exon13;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 22412 22606 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 22848 22965 . + . ID=g1589.t1.exon14;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 22848 22965 . + 2 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 23090 23180 . + . ID=g1589.t1.exon15;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 23090 23180 . + 1 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 23384 23475 . + . ID=g1589.t1.exon16;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 23384 23475 . + 0 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . exon 23608 23784 . + . ID=g1589.t1.exon17;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . CDS 23608 23650 . + 1 ID=cds.g1589.t1;Parent=g1589.t1 NODE_216_length_31026_cov_42.897 . three_prime_UTR 23651 23784 . + . ID=g1589.t1.utr3p1;Parent=g1589.t1 #PROT g1589.t1 g1589 MDADYLKESVGDVLARGLADIVLTKPSDPIEFLGQWILQERQNSARQKEDRLEAERLEIERAAETKRLEEQRLLDAAELEARRMKEQEQVRLKTLKRNQQNYQRSQEYLLKVEIRKKELEKVEEGLKGVEVAKKHLMISVADLNEMDKGTADELRGMDEAPANFRKVIKGILYMLGYQKHNVQEWQQCQEILKHDDFLKSLIRYNPAAEKKINRLKRAAVATSGLDRSEVQRSSVAATMLYNYLESAVDLYNETLHIQSPDVAAKEAVKIGATSDEPREDGDIFQDDSEPGVLELCPVLDTKKIPRESAGQRLTISLGWKNASKERPVDLDAACVMFNDVGAVWDTVYYNQLKSKDGSITHCGDDAVPNKDKERDEMDEVAEEEEEHADEGEEGGEEKLVFELDKVPLSIRALGFVLFSVKEDQSFAQVDSVSGQIAEADSGKDVGLRFTSPCGIDSTAVLMCILYRDPNNASAWMCKAVGETVEGQSEIGLNFMTTVPLLSYYLDILTILDPAAKRVRKAADAANMDRGEFVSFSSNPGILRLKMRWHVLSGKMINVGSTLIAYEHRKKVDVVNLDAAENEEESIMYMSDKDEGSNDDFLLDFTKMHRADSLLVVVNCFHGGTFRDVEGLNLRLVSEDSGAELCSFTLPSAHRDENNGLIFAKIYKEKGVWSALAIGTPSAGSNYEDLLPEIRKYLPAPAKKDVKRR* # ORIGINAL: g1587.t1 original gene structure, not modified by PASA NODE_216_length_31026_cov_42.897 AUGUSTUS gene 9893 12335 . + . ID=g1587;Name=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS mRNA 9893 12335 . + . ID=g1587.t1;Parent=g1587;Name=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 9893 9975 . + . ID=g1587.t1.exon1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 9893 9975 . + 0 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 10141 10251 . + . ID=g1587.t1.exon2;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 10141 10251 . + 1 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 10469 10556 . + . ID=g1587.t1.exon3;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 10469 10556 . + 1 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 10709 10805 . + . ID=g1587.t1.exon4;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 10709 10805 . + 0 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 11557 11717 . + . ID=g1587.t1.exon5;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 11557 11717 . + 2 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 11844 11972 . + . ID=g1587.t1.exon6;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 11844 11972 . + 0 ID=cds.g1587.t1;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 12117 12335 . + . ID=g1587.t1.exon7;Parent=g1587.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 12117 12335 . + 0 ID=cds.g1587.t1;Parent=g1587.t1 #PROT g1587.t1 g1587 MSDDDIGLDTKEAVVKARAAGGTSRDDGVGLLDRDEKGESDEDIEAIARDVDVDPDYLRNKKKIREIVAGFTPEQAQRYEAMRRPGFNRAQVKKLIQQQLGAPPTVVPTFVLAGIAKVYVGEIIETVLVQSTVASFMATSKTVQRLVREFQRTQQSNQFDVSLPNKDDIFHWEVKIKPEQIDSQTPIYKKLKDAKQCIVIAIEFGERFPFDAPFVFIKSPELKGPFVFENGALCMELLSKKGWSSVYSVDTVITQIIGTAFHVTTEIVSFTNVADINLAKSKFRALMQLHPEWNR* # PASA_UPDATE: g1586.t1, single gene model update, valid-1, status:[pasa:asmbl_3670,status:3], valid-1 NODE_216_length_31026_cov_42.897 . gene 6278 8022 . - . ID=g1586;Name=g1586.t1 NODE_216_length_31026_cov_42.897 . mRNA 6278 8022 . - . ID=g1586.t1;Parent=g1586;Name=g1586.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 7897 8022 . - . ID=g1586.t1.utr5p1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 7870 8022 . - . ID=g1586.t1.exon1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 7870 7896 . - 0 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 7690 7779 . - . ID=g1586.t1.exon2;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 7690 7779 . - 0 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 7517 7594 . - . ID=g1586.t1.exon3;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 7517 7594 . - 0 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 7146 7403 . - . ID=g1586.t1.exon4;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 7146 7403 . - 0 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 6920 7016 . - . ID=g1586.t1.exon5;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 6920 7016 . - 0 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . exon 6278 6800 . - . ID=g1586.t1.exon6;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . CDS 6688 6800 . - 2 ID=cds.g1586.t1;Parent=g1586.t1 NODE_216_length_31026_cov_42.897 . three_prime_UTR 6278 6687 . - . ID=g1586.t1.utr3p1;Parent=g1586.t1 #PROT g1586.t1 g1586 MRVSIDATTNPDNFNTVQTIDSFLKTYSFFATKQGVDSQVAMSTAVKIEATSQDSTVTPPATPPAVSYLSGFFPQSGPAGSWRKRYFSESASTAPPPNFNTDMPLSSPPSPPVSEVSNATDDWPLSIFRRHSISMPGARVFGNGPPFDVQAPLSPAISNTSVNTCESFMPQGVDPRLALRKRSLSMSAAESDTLPAKSSRVSLEKDPMSDLSLHGQFLDF* # PASA_UPDATE: g1585.t1, single gene model update, valid-1, status:[pasa:asmbl_3669,status:3], valid-1 NODE_216_length_31026_cov_42.897 . gene 2695 4696 . + . ID=g1585;Name=g1585.t1 NODE_216_length_31026_cov_42.897 . mRNA 2695 4696 . + . ID=g1585.t1;Parent=g1585;Name=g1585.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 2695 2883 . + . ID=g1585.t1.utr5p1;Parent=g1585.t1 NODE_216_length_31026_cov_42.897 . exon 2695 4696 . + . ID=g1585.t1.exon1;Parent=g1585.t1 NODE_216_length_31026_cov_42.897 . CDS 2884 4440 . + 0 ID=cds.g1585.t1;Parent=g1585.t1 NODE_216_length_31026_cov_42.897 . three_prime_UTR 4441 4696 . + . ID=g1585.t1.utr3p1;Parent=g1585.t1 #PROT g1585.t1 g1585 MAGYHMAADDPRIEYVGRTVVSTAGHVNDMLKGKPAAVIASHSHPRAVREAKTAAHMENVVVYDWAGVAIEFEVTGTSKVCVDMVGGGNVFVARVDGVEANRFKAKGDRKVYSAVSGLDPSRVYVISIIKITEAAHFVLYCLMPLKPVVIHGFIFDGACDVWLQVPHRRSFARAEQPLAIQLLRNSHQSLGSLSARDSGIDSVAQMDLENSSLPRTSSSSTWISIDTASVASTQGDGTRRIEFIGDSDTNGFGSESKCPSMSLSCFTKMTEMENCTVSFAYRVAETLGARPHLVAWSGKGVSRNAVDLSISSSKLSKDTMLNCCDRAIARLPHSKWDYARFLPNVVVIYLGCNDFYSKPYPTADVFQQAYLRLLRKTVSSYAEHDCRPTIVNVVGGFFPGYIASREHIVAAVTQFKTEYANVHIVSVPETLIDKRTDLGCLEHLNVSGHGKLGAFLAKEIAEIVGWTTVTAEVCVDVPRPIVDAAVATDVAIEAVAADAVCTSPASQPSDALLPALTA* # PASA_UPDATE: g1590.t1, single gene model update, valid-1, status:[pasa:asmbl_3673,status:3], valid-1 NODE_216_length_31026_cov_42.897 . gene 23848 26454 . - . ID=g1590;Name=g1590.t1 NODE_216_length_31026_cov_42.897 . mRNA 23848 26454 . - . ID=g1590.t1;Parent=g1590;Name=g1590.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 26298 26454 . - . ID=g1590.t1.utr5p1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 26219 26454 . - . ID=g1590.t1.exon1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 26219 26297 . - 0 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 26039 26076 . - . ID=g1590.t1.exon2;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 26039 26076 . - 2 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 25001 25863 . - . ID=g1590.t1.exon3;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 25001 25863 . - 0 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 24614 24789 . - . ID=g1590.t1.exon4;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 24614 24789 . - 1 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 24304 24365 . - . ID=g1590.t1.exon5;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 24304 24365 . - 2 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . exon 23848 24121 . - . ID=g1590.t1.exon6;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . CDS 24026 24121 . - 0 ID=cds.g1590.t1;Parent=g1590.t1 NODE_216_length_31026_cov_42.897 . three_prime_UTR 23848 24025 . - . ID=g1590.t1.utr3p1;Parent=g1590.t1 #PROT g1590.t1 g1590 MGKDYLGGDMRKVRDDETKEEDKEIQALDEADIAVLKTYGVGPYTQRIKKVEEDIQSAIKKVNELSGVKESDTGLAHPAMWDLAADRQMMQEEQPLQVARCTKIINAGSDEDAKYIINVKQIAKFVVGLGERVAPTDVEEGMRVGVDRNKYQIQIPLPPKIDPTVTLMQVEEKPDITYNDVGGCKEQIEKLREVVETPLLHPERFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRDLFEMARTKKACVIFFDEIDAVGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFKIHAKSMSVERDIRYELLARLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLDAVNKVIKSYAKFSATPRYMTYN* # PASA_UPDATE: g1588.t1, single gene model update, valid-1, status:[pasa:asmbl_3671,status:3], valid-1 # PASA_UPDATE: g1588.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3672,status:3], valid-1 NODE_216_length_31026_cov_42.897 . gene 12559 18247 . - . ID=g1588;Name=g1588.t1 NODE_216_length_31026_cov_42.897 . mRNA 12559 18247 . - . ID=g1588.t1;Parent=g1588;Name=g1588.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 18057 18247 . - . ID=g1588.t1.utr5p1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 17932 18247 . - . ID=g1588.t1.exon1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 17932 18056 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 17603 17744 . - . ID=g1588.t1.exon2;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 17603 17744 . - 1 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 17074 17472 . - . ID=g1588.t1.exon3;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 17074 17472 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 15860 16875 . - . ID=g1588.t1.exon4;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 15860 16875 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 14037 15657 . - . ID=g1588.t1.exon5;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 14037 15657 . - 1 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 13799 13910 . - . ID=g1588.t1.exon6;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 13799 13910 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 13517 13674 . - . ID=g1588.t1.exon7;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 13517 13674 . - 2 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 13306 13406 . - . ID=g1588.t1.exon8;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 13306 13406 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 12939 13089 . - . ID=g1588.t1.exon9;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 12939 13089 . - 1 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . exon 12559 12838 . - . ID=g1588.t1.exon10;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . CDS 12683 12838 . - 0 ID=cds.g1588.t1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . three_prime_UTR 12559 12682 . - . ID=g1588.t1.utr3p1;Parent=g1588.t1 NODE_216_length_31026_cov_42.897 . mRNA 12559 18247 . - . ID=g1588.t1.1.5b6be70b;Parent=g1588;Name=g1588.t1 NODE_216_length_31026_cov_42.897 . five_prime_UTR 18057 18247 . - . ID=g1588.t1.1.5b6be70b.utr5p1;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 17932 18247 . - . ID=g1588.t1.1.5b6be70b.exon1;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 17932 18056 . - 0 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 17603 17744 . - . ID=g1588.t1.1.5b6be70b.exon2;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 17603 17744 . - 1 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 17074 17472 . - . ID=g1588.t1.1.5b6be70b.exon3;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 17074 17472 . - 0 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 15860 16875 . - . ID=g1588.t1.1.5b6be70b.exon4;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 15860 16875 . - 0 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 13799 15657 . - . ID=g1588.t1.1.5b6be70b.exon5;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 13799 15657 . - 1 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 13517 13674 . - . ID=g1588.t1.1.5b6be70b.exon6;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 13517 13674 . - 2 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 13306 13406 . - . ID=g1588.t1.1.5b6be70b.exon7;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 13306 13406 . - 0 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 12939 13089 . - . ID=g1588.t1.1.5b6be70b.exon8;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 12939 13089 . - 1 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . exon 12559 12838 . - . ID=g1588.t1.1.5b6be70b.exon9;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . CDS 12683 12838 . - 0 ID=cds.g1588.t1.1.5b6be70b;Parent=g1588.t1.1.5b6be70b NODE_216_length_31026_cov_42.897 . three_prime_UTR 12559 12682 . - . ID=g1588.t1.1.5b6be70b.utr3p1;Parent=g1588.t1.1.5b6be70b #PROT g1588.t1 g1588 MPEGTPKFALRRSEHGDLASIQSLVDTVTENRFGSQEISMLIERTVLSITVSDENGEVVGFASFDDTPRKDKPEWEDWLLTQYNCPSVTPFNTTFLRYVAVRRSLEVDIMREVLRTVFGTLPDVDNCLTMIPSFEVGRLSDLFTAVRTKDRTSKGSTTQLLMATRLAYLPNLTIRAARVEDHDDLVPIFNRQSEVLTERYGEFFLAELIEAQSETNKAIVAEVDGRAVGFLSISTNISVPFLTTNFDLEPFDNFRKTIRRKIKRERKASVVNNDASKEEDSLASSHGGSNVALNAAGLVGSAAVAARDTPPSSAGSTTERTAPQLSIPSAAAVATAAVAEDQKPPSSPMKAEGGSASGGPSGRALLNATPGKAGLRGLVKRNSLTGGMKEPAQADGDAAAGGPALAAGASATPQPQGEEKALSGFAEKVMQMQGKPMLSRRCSSVRAIGSLVARSRSRGSIFGSQKELDALVQPILSNEEELGPEETINSCFCIYLFCVDERYESRSVDFLQAAFNAFPYHDYCVLAMPPTMPEFPLLRRFLRVLSKPGISVSQELFLCHRHSLLTNIGVRAVHPRDLPSIGRMCEAMEDGGSTIIDDVEIALDTKQDPDGVGVYAFVMTCAEQIVAVSVVRSMTVTNASELRGMYNLEDFIVFAGHGDDEHVSLHHFVVNPIFTYRSRHFAREILRQLSKSCMYYRVYPNPSAGVGGPTKSQTMTALIEEMVQVRPRRQICYPEGVRNMPAKPAPHAPFALSFLCKKMIYEPKLTVNARIVVIGASDVGLSYLASLVYQPHLRFGNLMLISPHGFPAEMAPDAARERFLSSCHCFTRDDHHRLALPTMVSSVSATMKGIDRENGLVHLENGQQVPYDYLVLATGAQLRLQGQLNIPARRVPRNVVCINDDADAQAFLELLETIRPIVRERRGGDWKIIVYGASIDAFCAVEGLLFSGIPGESIVLVKPALSSSTDTFGRIDDEQALQRITAEMKREGVTIHEAGILSGFEPGKDSGEVTGIQLKLAGRRDAVVVPCKAVVLASTRAVDQEVFRAVNDACLVFDGRLVVDAGFATNDRRIFSAGALAKYARRYHAPHMNMALHNSRELGEALAVEMLALFDPLADKVVHEDNLLPLFLQPKLFGGIMPGGLSFLSMQPPPSVDADPNEGRSVSTNHRDNYFQIKIDRYDCIESLACLTKGPLEVGNLACLYGLPQTYANRLMARFDEGLVKDLFAFFRQAWAMSLFHDRFDVFRKEVLEGTASHHHSKALQALIAGWLRESPSTDLTSANRSTIVDSFTNSDARKVVEKKLFEFLEFNSYHLPMYYRPGTPLGGQS* #PROT g1588.t1.1.5b6be70b g1588 MPEGTPKFALRRSEHGDLASIQSLVDTVTENRFGSQEISMLIERTVLSITVSDENGEVVGFASFDDTPRKDKPEWEDWLLTQYNCPSVTPFNTTFLRYVAVRRSLEVDIMREVLRTVFGTLPDVDNCLTMIPSFEVGRLSDLFTAVRTKDRTSKGSTTQLLMATRLAYLPNLTIRAARVEDHDDLVPIFNRQSEVLTERYGEFFLAELIEAQSETNKAIVAEVDGRAVGFLSISTNISVPFLTTNFDLEPFDNFRKTIRRKIKRERKASVVNNDASKEEDSLASSHGGSNVALNAAGLVGSAAVAARDTPPSSAGSTTERTAPQLSIPSAAAVATAAVAEDQKPPSSPMKAEGGSASGGPSGRALLNATPGKAGLRGLVKRNSLTGGMKEPAQADGDAAAGGPALAAGASATPQPQGEEKALSGFAEKVMQMQGKPMLSRRCSSVRAIGSLVARSRSRGSIFGSQKELDALVQPILSNEEELGPEETINSCFCIYLFCVDERYESRSVDFLQAAFNAFPYHDYCVLAMPPTMPEFPLLRRFLRVLSKPGISVSQELFLCHRHSLLTNIGVRAVHPRDLPSIGRMCEAMEDGGSTIIDDVEIALDTKQDPDGVGVYAFVMTCAEQIVAVSVVRSMTVTNASELRGMYNLEDFIVFAGHGDDEHVSLHHFVVNPIFTYRSRHFAREILRQLSKSCMYYRVYPNPSAGVGGPTKSQTMTALIEEMVQVRPRRQICYPEGVRNMPAKPAPHAPFALSFLCKKMIYEPKLTVNARIVVIGASDVGLSYLASLVYQPHLRFGNLMLISPHGFPAEMAPDAARERFLSSCHCFTRDDHHRLALPTMVSSVSATMKGIDRENGLVHLENGQQVPYDYLVLATGAQLRLQGQLNIPARRVPRNVVCINDDADAQAFLELLETIRPIVRERRGGDWKIIVYGASIDAFCAVEGLLFSGIPGESIVLVKPALSSSTDTFGRIDDEQALQRITAEMKREGVTIHEAGILSGFEPGKDSGEVTGIQLKLAGRRDAVVVPCKAVVLASTRAVDQEVFRAVNDACLVFDGRLVVDAGFATNDRRIFSAGALAKYARRYHAPHMNMALHNSRELGEAVGGRDVAPAFHLCVSILRLFFAFYCFEYFDRSNFFVLVWLLQLAVEMLALFDPLADKVVHEDNLLPLFLQPKLFGGIMPGGLSFLSMQPPPSVDADPNEGRSVSTNHRDNYFQIKIDRYDCIESLACLTKGPLEVGNLACLYGLPQTYANRLMARFDEGLVKDLFAFFRQAWAMSLFHDRFDVFRKEVLEGTASHHHSKALQALIAGWLRESPSTDLTSANRSTIVDSFTNSDARKVVEKKLFEFLEFNSYHLPMYYRPGTPLGGQS* # ORIGINAL: g1591.t1 original gene structure, not modified by PASA NODE_216_length_31026_cov_42.897 AUGUSTUS gene 26796 28572 . + . ID=g1591;Name=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS mRNA 26796 28572 . + . ID=g1591.t1;Parent=g1591;Name=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 26796 27312 . + . ID=g1591.t1.exon1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 26796 27312 . + 0 ID=cds.g1591.t1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 27570 27671 . + . ID=g1591.t1.exon2;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 27570 27671 . + 2 ID=cds.g1591.t1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 27894 27964 . + . ID=g1591.t1.exon3;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 27894 27964 . + 2 ID=cds.g1591.t1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 28092 28142 . + . ID=g1591.t1.exon4;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 28092 28142 . + 0 ID=cds.g1591.t1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 28319 28399 . + . ID=g1591.t1.exon5;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 28319 28399 . + 0 ID=cds.g1591.t1;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 28519 28572 . + . ID=g1591.t1.exon6;Parent=g1591.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 28519 28572 . + 0 ID=cds.g1591.t1;Parent=g1591.t1 #PROT g1591.t1 g1591 MERDGSSFDRPVDRLNDARRGSDDRNRDRDRDRDRDRERDRARDRSGGRRDGSAERDADFRARRDVRGGSRSRSRSPARGSVRDGGRGRDRDLRDTDRRPASARSRSRSRSRSPTRDPPRERSIDQRLGGPIRSASPNGKGDREREKERDRDRDRSAASKERARSRSRSRSRERRRSKAGSNSSTSGSDSSSDSDSSSSGSGNDSDERSKKKKAKRSKHKKEKKSKKSKKHKKEKEKDKDGPVRLSKYLKDRARSVISGKKIKMKVKKSSEDKEREKNRERLLEFLNQAHG* # ORIGINAL: g1584.t1 original gene structure, not modified by PASA NODE_216_length_31026_cov_42.897 AUGUSTUS gene 403 2139 . - . ID=g1584;Name=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS mRNA 403 2139 . - . ID=g1584.t1;Parent=g1584;Name=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 2045 2139 . - . ID=g1584.t1.exon1;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 2045 2139 . - 0 ID=cds.g1584.t1;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 1789 1932 . - . ID=g1584.t1.exon2;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 1789 1932 . - 1 ID=cds.g1584.t1;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 1588 1680 . - . ID=g1584.t1.exon3;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 1588 1680 . - 1 ID=cds.g1584.t1;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS exon 403 1480 . - . ID=g1584.t1.exon4;Parent=g1584.t1 NODE_216_length_31026_cov_42.897 AUGUSTUS CDS 403 1480 . - 1 ID=cds.g1584.t1;Parent=g1584.t1 #PROT g1584.t1 g1584 MYNGIGLTTTRGSGTNGYVTKNFAHVPLRRDKIEYRTEGVDEAAAFAQLRKANPALLEHDRLRQVEIKCIELSDELEEEGLPLEEILVRVDALRQVLLSDAQSGKQEAGKRFNDTHQLAAANEKKNEKMRAALGIDPLRATGQGFGKNGPVAATAAPPTLAPEKDVRGEKQSERSEKKAAEKKQRLSRKESSSSESSSSSSSSSSDSSSSSSESDSESDDGKKGKNARSGNGKARSATEGKDKPAARVEDVPRRQGAAVEDRRRSRSPPRRDERPVNRERSASPPPAKRPRHDSASPPPPPARRTEGTSRVDERHPALREEERRRVDDVRRDNTDARRVPEQPREDRRSTAVTGRGRRESPRRDSPRRRSPSPRRRVEDLPSDSDEEYQRHSGLRSTIAKHPSRPVVVASEGARDDASRRGRSRSPPQRHGRSRSRSRSAERDRRRQHRSRSRSRSRSRSRSASAGRGR* # PASA_UPDATE: g1592.t1, single gene model update, valid-1, status:[pasa:asmbl_3675,status:12],[pasa:asmbl_3676,status:12], valid-1 NODE_216_length_31026_cov_42.897 . gene 29076 31026 . + . ID=g1592;Name=g1592.t1 NODE_216_length_31026_cov_42.897 . mRNA 29076 31026 . + . ID=g1592.t1;Parent=g1592;Name=g1592.t1 NODE_216_length_31026_cov_42.897 . exon 29076 29346 . + . ID=g1592.t1.exon1;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . CDS 29076 29346 . + 0 ID=cds.g1592.t1;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . exon 29485 29753 . + . ID=g1592.t1.exon2;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . CDS 29485 29753 . + 2 ID=cds.g1592.t1;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . exon 29930 30092 . + . ID=g1592.t1.exon3;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . CDS 29930 30092 . + 0 ID=cds.g1592.t1;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . exon 30345 31026 . + . ID=g1592.t1.exon4;Parent=g1592.t1 NODE_216_length_31026_cov_42.897 . CDS 30345 31026 . + 2 ID=cds.g1592.t1;Parent=g1592.t1;3_prime_partial=true #PROT g1592.t1 g1592 MPLERSHVQPVYICRGPVSDDVPRDSMLDAVAVKGLANAVRQLSALSRYAENMFGELVTEATNCHNRTQQIRARVNNVKDAMTKMSPEKQASTFKFGNRSYRSNANQDQQVLTHATLPKTVLETYSACVPPPPLTVMDRYREDGKTSMKLYTNPAYFFELWQEEMLRQYEDLKKQKGKRKKQGPKKAHAEQRKVAQVKVVKYNAMGREFGDSPAPQQQQQQPPRTASQSRSPQPGSGDVIAPPPPPTDAPAFYQAVPPPPPPTEPYYSEQDRLAEQQRYEQQLYEQQVYEQQQREYLEKQREYEEQQREYEEQQRQYQLMQQQQLLLEQQQQQQQQQYYEQEQPPPPPPPMEDAYDEAPPPPPPVAHTPAAPHSPAPPKPTGAPPPKPSGPPPPKPGLPGPAKPGLPGGPPPPKPSAPPPSPHHPTTGPPPPPMMGRTPPPPPMMSAAPPPPPQVIAPPPP # ORIGINAL: g11251.t1 original gene structure, not modified by PASA NODE_1977_length_8235_cov_42.7191 AUGUSTUS gene 4618 7356 . - . ID=g11251;Name=g11251.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS mRNA 4618 7356 . - . ID=g11251.t1;Parent=g11251;Name=g11251.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 4618 7356 . - . ID=g11251.t1.exon1;Parent=g11251.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 4618 7356 . - 0 ID=cds.g11251.t1;Parent=g11251.t1 #PROT g11251.t1 g11251 MVRSGSDLDGDTLFFRLGYNNVYCYEDHDYVCQNAATKASLWAPVSEPHVHVERTLKGFDATAVTQLVAHGWREVGRIILRAATWGLLLNLDSIESVYEGQLTPVWSRLIRTSLVRDVFRQFAFYAHDDDEDYAVDIPTSEDDPPIAPSRVPFFPRLTIAQQHEVGFMVALESNPTVRIGKAGNNVAFLDTGYVFDPIKVDAVPADTHCAHGSATKGCDSEGVVGECSCSSLLIRADDAGGLELECPGGVLASETGSGKTVSVIALIATRNRPKLHRPKSWAVSDGDCGGARAGQEPDSEGVDSRPASVSSVCAPEMNPTLVIVTENILYQWADEFARFCPQIRVTVAATIGECADALSSASVRPFDVLLTHRAVVLSMGVLAGFLATSSDPWMFQAIRSPDVSTKVAASPEQRQNARTAVGRLFRRHWSRVVVDEFHEIMVESAHKMRMPPVEFGACGGALPDTAFCSFLRGELVAHVDRRPFATAWADAVVRRLSFDFAWGITGTPRDLSFSSHLWSTLSALGVTHNSEWTERRAMRDAFLRRCIRRNERPSLPPVHGTTEEVKFTSAQRLAYRTVLLSGSGDAETAARELCSHMSDEWQPGQHSEDDENARKSSQIVRVLDRISSLHSSAIGTVEKEISAACHAPLSSVAASNFAPSSRVGALFRRLESLRSADNIFASVAQLVTAPAFECPVCLSVSDAEKALVVTGCLHSMCSTCFADILQRVSEAPCPICRQPMTTEATFMHPQNTTNSVTKADAILSYLARIATEKPGEKVILYTQFQALAKHLGSLFERAKVSHVRLRGDPSERNLSIRRFKEDPSVTVLVMSIEQSASGINVIEANNVVFAHPIFGMDRDTAAVTYRQCVGRAHRFGQTRPVHVTVFVTADSVESELYASQMVSFDTKDGRPA* # ORIGINAL: g11250.t1 original gene structure, not modified by PASA NODE_1977_length_8235_cov_42.7191 AUGUSTUS gene 2661 4455 . + . ID=g11250;Name=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS mRNA 2661 4455 . + . ID=g11250.t1;Parent=g11250;Name=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 2661 2810 . + . ID=g11250.t1.exon1;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 2661 2810 . + 0 ID=cds.g11250.t1;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 2984 3186 . + . ID=g11250.t1.exon2;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 2984 3186 . + 0 ID=cds.g11250.t1;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 3302 3458 . + . ID=g11250.t1.exon3;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 3302 3458 . + 1 ID=cds.g11250.t1;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 3595 3732 . + . ID=g11250.t1.exon4;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 3595 3732 . + 0 ID=cds.g11250.t1;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS exon 3982 4455 . + . ID=g11250.t1.exon5;Parent=g11250.t1 NODE_1977_length_8235_cov_42.7191 AUGUSTUS CDS 3982 4455 . + 0 ID=cds.g11250.t1;Parent=g11250.t1 #PROT g11250.t1 g11250 MASPSAHTLEAIRYKRGALDVLNQLLLPHESVYERMRDAGDAWAAIREMKVRGAPAIAIVAALSLAVELTDTAEVGGVAQPTQRFSTADAFVAFVTEKLDYLRTSRPTAVNLFEAADRLTKVARDVTADGRPVADAVLALIVEIEAMLAKDIADNRAIGKFGAACIPGERVRMLTHCNTGSLATAGFGTALGIIRALKEEGRLERAFFTETRPYNQGARLTAYEMAVDGIPATLVCDSAVPACMRLHGVSAVVVGADRVVANGDTANKIGTYMIAIAAKHHGIPFYVAAPTTSIDPKTPSGDLIHIEERPEEEVTHYKGHRVVVDGMRAWNPSFDVTPAQLITGIVTELGVIERGSGATVFDVRAFLQTHGKL* # PASA_UPDATE: g11249.t1, single gene model update, valid-1, status:[pasa:asmbl_3149,status:12], valid-1 NODE_1977_length_8235_cov_42.7191 . gene 200 2166 . + . ID=g11249;Name=g11249.t1 NODE_1977_length_8235_cov_42.7191 . mRNA 200 2166 . + . ID=g11249.t1;Parent=g11249;Name=g11249.t1 NODE_1977_length_8235_cov_42.7191 . five_prime_UTR 200 237 . + . ID=g11249.t1.utr5p1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . exon 200 757 . + . ID=g11249.t1.exon1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . CDS 238 757 . + 0 ID=cds.g11249.t1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . exon 1007 1265 . + . ID=g11249.t1.exon2;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . CDS 1007 1265 . + 2 ID=cds.g11249.t1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . exon 1433 1704 . + . ID=g11249.t1.exon3;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . CDS 1433 1704 . + 1 ID=cds.g11249.t1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . exon 2024 2166 . + . ID=g11249.t1.exon4;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . CDS 2024 2064 . + 2 ID=cds.g11249.t1;Parent=g11249.t1 NODE_1977_length_8235_cov_42.7191 . three_prime_UTR 2065 2166 . + . ID=g11249.t1.utr3p1;Parent=g11249.t1 #PROT g11249.t1 g11249 MDATVSTPSVEVASKRKRRRPHSKRKKGVKGAPTDNAAPQSDASCEVDATEDGRDATDYDPLASVQQGCVLSASPPPSDADRRKREARNDVTDAAIPRICTAAGDVHSAEVGLPKKRARVDAHTFPLGNYEHYYGYRTGDALDPRLAMFDAEWFEGKSVLDIGCNAGAVTMGVAEKFHPAYICGVDIDPKLIARARRAAQVRASVRPLEGTRFPISFALCQGPISAASRGSSFPNNIEFVAGNYIEGEHPTHAEYDAVLCLSVTKWVHLNWGDAGIRKLFSRVSQSIRAGGVFILEAQPWASYKKKKGLTDTTRKNYADIRLRPDAFRECLVKDYLFDHVITRRPDQPTKGFDRSVEIFRKRA* # PASA_UPDATE: g889.t1, single gene model update, valid-1, status:[pasa:asmbl_8903,status:12], valid-1 NODE_693_length_18980_cov_44.6335 . gene 18684 18980 . + . ID=g889;Name=g889.t1 NODE_693_length_18980_cov_44.6335 . mRNA 18684 18980 . + . ID=g889.t1;Parent=g889;Name=g889.t1 NODE_693_length_18980_cov_44.6335 . five_prime_UTR 18684 18749 . + . ID=g889.t1.utr5p1;Parent=g889.t1 NODE_693_length_18980_cov_44.6335 . exon 18684 18980 . + . ID=g889.t1.exon1;Parent=g889.t1 NODE_693_length_18980_cov_44.6335 . CDS 18750 18980 . + 0 ID=cds.g889.t1;Parent=g889.t1;3_prime_partial=true #PROT g889.t1 g889 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV # PASA_UPDATE: g883.t1, single gene model update, valid-1, status:[pasa:asmbl_8894,status:3], valid-1 NODE_693_length_18980_cov_44.6335 . gene 2780 4621 . - . ID=g883;Name=g883.t1 NODE_693_length_18980_cov_44.6335 . mRNA 2780 4621 . - . ID=g883.t1;Parent=g883;Name=g883.t1 NODE_693_length_18980_cov_44.6335 . five_prime_UTR 4511 4621 . - . ID=g883.t1.utr5p1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 4439 4621 . - . ID=g883.t1.exon1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 4439 4510 . - 0 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 4165 4232 . - . ID=g883.t1.exon2;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 4165 4232 . - 0 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 3907 4038 . - . ID=g883.t1.exon3;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 3907 4038 . - 1 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 3598 3727 . - . ID=g883.t1.exon4;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 3598 3727 . - 1 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 3247 3413 . - . ID=g883.t1.exon5;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 3247 3413 . - 0 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . exon 2780 2990 . - . ID=g883.t1.exon6;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . CDS 2885 2990 . - 1 ID=cds.g883.t1;Parent=g883.t1 NODE_693_length_18980_cov_44.6335 . three_prime_UTR 2780 2884 . - . ID=g883.t1.utr3p1;Parent=g883.t1 #PROT g883.t1 g883 MAAAVGQSYASNGMDWMTAEHMTGTTIMAVEFNGGVVIGADSRTTTGSYIANRVTDKLTPITDRIFCCRSGSAADTQAIADYVKYYLDMHMMEIGDQPEVQTAASVFRELCYGNREQLMAGIICAGWDKRRGGQVYTIPLGGMCLRQPFSIGGSGSTYIYGFCDANFRKGMTAAECEKFTATAISHAMARDGSSGGIIRLATITEIGVERKIIPGNQLPTVFEG* # ORIGINAL: g882.t1 original gene structure, not modified by PASA NODE_693_length_18980_cov_44.6335 AUGUSTUS gene 1680 2561 . + . ID=g882;Name=g882.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS mRNA 1680 2561 . + . ID=g882.t1;Parent=g882;Name=g882.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS exon 1680 2561 . + . ID=g882.t1.exon1;Parent=g882.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS CDS 1680 2561 . + 0 ID=cds.g882.t1;Parent=g882.t1 #PROT g882.t1 g882 MTKSAGSASADEPTVLGHKPSIPSWFNARILSVLCTVLVIVGSVANEALDLPEIYFARKHNLVNIYMTKFAWAWTTIPLSAYIVTHSLSSLGSHLPSALLRTMRIWIASVAWKVVTSIFEFIHAAGTCSDISVPAYRDCVEKGHSWIGTDISGHCFLLTFASLLIASEIEILSHEEHSFVCKLRRRVSFNGASHIPSTQGRTHSTSAQLHTPMQFHFLSYYIAPVLRIALVSLIFLWSWNLLVTASYYHTSSEKIGGLVIAIFCWFLLYRLTGVVRGFSRIAQGDGGVMDKAE* # ORIGINAL: g885.t1 original gene structure, not modified by PASA NODE_693_length_18980_cov_44.6335 AUGUSTUS gene 7418 8275 . - . ID=g885;Name=g885.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS mRNA 7418 8275 . - . ID=g885.t1;Parent=g885;Name=g885.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS exon 7418 8275 . - . ID=g885.t1.exon1;Parent=g885.t1 NODE_693_length_18980_cov_44.6335 AUGUSTUS CDS 7418 8275 . - 0 ID=cds.g885.t1;Parent=g885.t1 #PROT g885.t1 g885 MDICVTSDGFEKEGASISGINSNPLILGAVGESLARRRRSSGLLTIFEHPTEVQSGFCAATFATHSKEARSRRPSFELHRTSLSVNPNNGSSLGEDSCMEAANIQQQPLCRAPPPTPAPDFVRRKSVTMLENIGASDVPKALSSVTFSAIGMADGRFHESDHEVADSEVEREVSSVVGSGGSLFFGEDFEMDTEGHVLATGPLHHQRRAILARARAGPGAVDADVGVGPVPPAHYMRKRRNAICLSRTQYGGICKRRMLQAAANASSNGTDVDSLRVELRNLAMR* # PASA_UPDATE: g884.t1, single gene model update, valid-1, status:[pasa:asmbl_8905,status:3], valid-1 NODE_693_length_18980_cov_44.6335 . gene 5090 6822 . + . ID=g884;Name=g884.t1 NODE_693_length_18980_cov_44.6335 . mRNA 5090 6822 . + . ID=g884.t1;Parent=g884;Name=g884.t1 NODE_693_length_18980_cov_44.6335 . five_prime_UTR 5090 5326 . + . ID=g884.t1.utr5p1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . exon 5090 5384 . + . ID=g884.t1.exon1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . CDS 5327 5384 . + 0 ID=cds.g884.t1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . exon 5535 5601 . + . ID=g884.t1.exon2;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . CDS 5535 5601 . + 2 ID=cds.g884.t1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . exon 5743 5817 . + . ID=g884.t1.exon3;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . CDS 5743 5817 . + 1 ID=cds.g884.t1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . exon 5991 6074 . + . ID=g884.t1.exon4;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . CDS 5991 6074 . + 1 ID=cds.g884.t1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . exon 6326 6822 . + . ID=g884.t1.exon5;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . CDS 6326 6719 . + 1 ID=cds.g884.t1;Parent=g884.t1 NODE_693_length_18980_cov_44.6335 . three_prime_UTR 6720 6822 . + . ID=g884.t1.utr3p1;Parent=g884.t1 #PROT g884.t1 g884 MANIEWKMWANMQACFLSFILFISGIIATRMSNAKDYGIYALIICFFIFALEWPRSKRTRGTACDRPYQKYLQPFPAHMGVVGRNLYIRGAFYLCVAAPCFIKMPLQHAGILSVITSVVYFRAAFAGEEWIAEAKRETRGGGGGGAAKAAEPAPSVVPKSIPSRSAAAAGGVASSPSSPSMGRPSEVALEDVDMRQSTTTLINRPSPAANRPAPVPRPRPPYTNA* # PASA_UPDATE: g886.t1, single gene model update, valid-1, status:[pasa:asmbl_8901,status:12],[pasa:asmbl_8904,status:12], valid-1 NODE_693_length_18980_cov_44.6335 . gene 9850 13411 . + . ID=g886;Name=g886.t1 NODE_693_length_18980_cov_44.6335 . mRNA 9850 13411 . + . ID=g886.t1;Parent=g886;Name=g886.t1 NODE_693_length_18980_cov_44.6335 . exon 9850 13411 . + . ID=g886.t1.exon1;Parent=g886.t1 NODE_693_length_18980_cov_44.6335 . CDS 9850 13320 . + 0 ID=cds.g886.t1;Parent=g886.t1 NODE_693_length_18980_cov_44.6335 . three_prime_UTR 13321 13411 . + . ID=g886.t1.utr3p1;Parent=g886.t1 #PROT g886.t1 g886 MYSGRRYKWADCTCSVCSSSTSSSSEIRRGRSPTRRVEYSRPKSAVSSAYRSDLTSKAWIDAHGLKKRRLTLKQIYDDQKKNNLSTGRRSPTRSEEGYVRATLDSVGAAPSLTVLFNDDDLDDTERNLWQLVHQIERRLEWLGKGSRRVFGTIAEDSVTFVLDFSGGMTRLEHELKQAVRFLISDQLPRDNRRFNFVAYAEEAERWERRVVDVNAESMECAWLWLRDLRPGHKANIADALALALEDKQTQAVYLVSCGRSTTNADALLCAVDDANRRRKTGRIPVHVTAYEPETVEGEAMLRAIAAETRGRFHSFAVRGPPVSSDSDDVRILEGELTAAKDVLVHIMSLRTGILREVRPTSRARSRSPMKTGSPSRHDKCHTSPVRRDPLERARSPEAKKSGGGGGGGDDKGGKKDDDATRLDSRAWLKKNGISKDCAKSIDETLKSRSCPHAVVHSLDSHEKTLKKVLKECKERVKWLRQGSRELFGNITEKRPVFCVDISEAMVYRMDYVRDQLRNLLQEQVKNTEAFNLLCFDTAVDAWARHTVTTGPRSIDSAREWIRDTDVGSGQVSIEGVLKVALADPDADAVYLVVSGVPLSNRDAMDVLDTVRMVNSRRIPIHVVTFCVGSPKQPSGAQQAMAEQFGMRLAAQTNGRYHSVFWDGGRYRGAGDELRVVKAEVARARELTGKLSKFRGDTSRCNCAADGPLKKHKAPSCQCDDRPIRLPGIRGASEREDRKCHEHHHCGDTCFGACDGRLTPCSPHRRCASTGPNCDCWECARSCRPSSRGCEVERFRPGSSRCAHEKEEKKEVKKEEKKEEKKEEKKEEKKEEKKSAPVCEGKCHQLNHCGGACCHGRSPCHYCRRCPLDCICRECSRSFCRGESYEAERFRPSSSRSAPEKEEKKEEKREEKKEEKKEEKKEVKKESCASKPDTRGASGCENKCHEHGGACFGSPHGRMPPPHDVFHPCASPGLDWEYWEWARSYRSSSRGECRPPSAPKEEKKEEKKEVKKEEKKEEKKEEKKVEKCHCVRVCVCVCQERNSCACVCKSHKEEKKEVKKEEKKEEKKEEKKEEKKEEKKEEKCLCVHVCVCVRKEKNSCACVCKSHKEEKKEEKKEEKKEEKKEEKEEKCHCKEEKCHGVRVCVEQDSCACACKSH* # PASA_UPDATE: g887.t1, single gene model update, valid-1, status:[pasa:asmbl_8895,status:3], valid-1 NODE_693_length_18980_cov_44.6335 . gene 13541 14676 . - . ID=g887;Name=g887.t1 NODE_693_length_18980_cov_44.6335 . mRNA 13541 14676 . - . ID=g887.t1;Parent=g887;Name=g887.t1 NODE_693_length_18980_cov_44.6335 . five_prime_UTR 14627 14676 . - . ID=g887.t1.utr5p1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . exon 14539 14676 . - . ID=g887.t1.exon1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . CDS 14539 14626 . - 0 ID=cds.g887.t1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . exon 14303 14401 . - . ID=g887.t1.exon2;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . CDS 14303 14401 . - 2 ID=cds.g887.t1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . exon 14031 14200 . - . ID=g887.t1.exon3;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . CDS 14031 14200 . - 2 ID=cds.g887.t1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . exon 13541 13908 . - . ID=g887.t1.exon4;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . CDS 13828 13908 . - 0 ID=cds.g887.t1;Parent=g887.t1 NODE_693_length_18980_cov_44.6335 . three_prime_UTR 13541 13827 . - . ID=g887.t1.utr3p1;Parent=g887.t1 #PROT g887.t1 g887 MFARTAIFLALVGFALAAPFQVGDIWTPCTATGDHFTPTNVVITPASPVKGQPLTVAVNGTLDESVTGGSVEIVIKYLGISIVNEKKDLCTLDSAHPCPFAQGVFSLTEGATIPSIAPSGTYKGTVKLSDQNGQEIYCVNLDFKL* # PASA_UPDATE: g888.t1, single gene model update, valid-1, status:[pasa:asmbl_8896,status:12], valid-1 # ORIGINAL: g888.t2 original gene structure, not modified by PASA NODE_693_length_18980_cov_44.6335 . gene 15388 16906 . - . ID=g888;Name=g888.t1 NODE_693_length_18980_cov_44.6335 . mRNA 15388 16906 . - . ID=g888.t1;Parent=g888;Name=g888.t1 NODE_693_length_18980_cov_44.6335 . five_prime_UTR 16864 16906 . - . ID=g888.t1.utr5p1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 16744 16906 . - . ID=g888.t1.exon1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 16744 16863 . - 0 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 16617 16642 . - . ID=g888.t1.exon2;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 16617 16642 . - 0 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 16332 16393 . - . ID=g888.t1.exon3;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 16332 16393 . - 1 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 16015 16106 . - . ID=g888.t1.exon4;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 16015 16106 . - 2 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 15585 15659 . - . ID=g888.t1.exon5;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 15585 15659 . - 0 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 15388 15492 . - . ID=g888.t1.exon6;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . CDS 15445 15492 . - 0 ID=cds.g888.t1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . three_prime_UTR 15388 15444 . - . ID=g888.t1.utr3p1;Parent=g888.t1 NODE_693_length_18980_cov_44.6335 . mRNA 15445 16863 . - . ID=g888.t2;Parent=g888;Name=g888.t1 NODE_693_length_18980_cov_44.6335 . exon 16795 16863 . - . ID=g888.t2.exon1;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 16795 16863 . - 0 ID=cds.g888.t2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . exon 16617 16642 . - . ID=g888.t2.exon2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 16617 16642 . - 0 ID=cds.g888.t2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . exon 16332 16393 . - . ID=g888.t2.exon3;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 16332 16393 . - 1 ID=cds.g888.t2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . exon 16015 16106 . - . ID=g888.t2.exon4;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 16015 16106 . - 2 ID=cds.g888.t2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . exon 15585 15659 . - . ID=g888.t2.exon5;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 15585 15659 . - 0 ID=cds.g888.t2;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . exon 15445 15492 . - . ID=g888.t2.exon6;Parent=g888.t2 NODE_693_length_18980_cov_44.6335 . CDS 15445 15492 . - 0 ID=cds.g888.t2;Parent=g888.t2 #PROT g888.t1 g888 MDDDLDAIRARRAAELRQGGGGAVRAVQSVCGRSQSAIFWDEKAAAAKNQEDARAAMLSTVLDQSARARLGRISSVKPDKARAVEELIIRMARSGQLAGKVDEPQLISLLEQVGGAEKKSAPTVKFNRRKFDSDDEDLDL* #PROT g888.t2 g888 MDDDLDAIRARRAAELRQGGGGADEKAAAAKNQEDARAAMLSTVLDQSARARLGRISSVKPDKARAVEELIIRMARSGQLAGKVDEPQLISLLEQVGGAEKKSAPTVKFNRRKFDSDDEDLDL* # ORIGINAL: g2122.t1 original gene structure, not modified by PASA NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS gene 1906 2844 . - . ID=g2122;Name=g2122.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS mRNA 1906 2844 . - . ID=g2122.t1;Parent=g2122;Name=g2122.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS exon 1906 2844 . - . ID=g2122.t1.exon1;Parent=g2122.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS CDS 1906 2844 . - 0 ID=cds.g2122.t1;Parent=g2122.t1 #PROT g2122.t1 g2122 MVLSLEWLSAKVAVRAGHSLPHLTLRSADFERLVYLQKHWRLRRACRLQKMASWDVAFVLSTSDANCDTTIGANTQQQMLALAFTSIYNVRPRRVANFQDWLEAAVWFRDHFAEIRTLTIIGHGSRNGKLTLGSNENKISISPDAIVTGLHTGLRLQGGRFRAIFRRLRTEPSLTNFLKLSSLMSFLAQQAWDVPENTEPVPVIFVNCHGHITAKLANEAIQQLPSGLVKFYSIATPWEPLTSAEVGDDIITCVIPHLRNLFDTLPRTLGRGACRNAIEAYERSRWSSTQQAYDSSVFTLAFLYAIARRWLS* # ORIGINAL: g2123.t1 original gene structure, not modified by PASA NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS gene 2866 4015 . - . ID=g2123;Name=g2123.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS mRNA 2866 4015 . - . ID=g2123.t1;Parent=g2123;Name=g2123.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS exon 3409 4015 . - . ID=g2123.t1.exon1;Parent=g2123.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS CDS 3409 4015 . - 0 ID=cds.g2123.t1;Parent=g2123.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS exon 2866 3257 . - . ID=g2123.t1.exon2;Parent=g2123.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS CDS 2866 3257 . - 2 ID=cds.g2123.t1;Parent=g2123.t1 #PROT g2123.t1 g2123 MSSRSLSPVALNDKEPLTCEDLSKLKELVQSEALEAVIDTYIGAELATKPVVVEGSVRKPLVEGGILTQNIFRCSEVHPGAFETDAHRIAHIRNYRGPYAPTDNVGTKEGRVYPQPLWPDCSFELSRNESLKRSSAPKEPNLVRPGVSCSLRIDNAIPFVDGAKVKIDTDGGDVRIDKSHPHWSLSFDDFHKEYRERLKHVRRTYNGHLDVVQFLHVNRTEGCTTYAMDFAASNGHLDVVRWLHCDRMAHDRMAHDRMAHAFGDFCYARGTHKVKLTVNEYGFLFTVNYGGEVYYGRMPFTNEYNIQPSQDIEIVCDNLELWGKKMKRPDRL* # ORIGINAL: g2124.t1 original gene structure, not modified by PASA NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS gene 4538 6608 . - . ID=g2124;Name=g2124.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS mRNA 4538 6608 . - . ID=g2124.t1;Parent=g2124;Name=g2124.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS exon 6519 6608 . - . ID=g2124.t1.exon1;Parent=g2124.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS CDS 6519 6608 . - 0 ID=cds.g2124.t1;Parent=g2124.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS exon 4538 5995 . - . ID=g2124.t1.exon2;Parent=g2124.t1 NODE_1391_length_11628_cov_38.7987_potentialcontaminant AUGUSTUS CDS 4538 5995 . - 0 ID=cds.g2124.t1;Parent=g2124.t1 #PROT g2124.t1 g2124 MSLRPSPRPALPRPPYAIWPHVIKQRVQEEEYFLFGASTSSADVAPVPHSDAGSITEIFNDDVELPAADVVAAASLVRERLGRASLQKPVAAVFHAKDYRTNVDGDLCVAVYASVHDEGRIRRLFRTSSAPLVRVICVETNLDERVLSTPVHMDIRDEMADAINGVANDWFAEHSNLSALVGSGDEVVAFVRTKGIVPFDEDLFPEKLGRFVVRVRTGVWEFAVGEIQAVNSSELGIGSSIGRSDAAIVPPDGGTLGCFVKTANGISAITNAHVVMTDAAYKALNNGMSVKDAANISHSLKKEKATIAHPTVSQAVSLPTKLMNIGHVVDAEFAETTYNNLRVGLDVALIRVSKKTLSGESRRKKAKSLDCSAFVPLQPQVWQALGSRRAPRLVSQITKAELRSFTGDKVYKFGMRTGVTYSTLVCDFAATATLKDFAKLHPTTHHVDHPRIVRLNQIVLSGSMLDHGDSGSLLCDLVGDDARALGIMYGALPAFSLACPIAAVLDRFSATLSLV* # ORIGINAL: g10764.t1 original gene structure, not modified by PASA NODE_702_length_18862_cov_41.3159 AUGUSTUS gene 12681 18694 . - . ID=g10764;Name=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS mRNA 12681 18694 . - . ID=g10764.t1;Parent=g10764;Name=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 18531 18694 . - . ID=g10764.t1.exon1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 18531 18694 . - 2 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 18000 18137 . - . ID=g10764.t1.exon2;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 18000 18137 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 17548 17669 . - . ID=g10764.t1.exon3;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 17548 17669 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 17003 17195 . - . ID=g10764.t1.exon4;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 17003 17195 . - 1 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 16480 16677 . - . ID=g10764.t1.exon5;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 16480 16677 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 15965 16153 . - . ID=g10764.t1.exon6;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 15965 16153 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 15582 15654 . - . ID=g10764.t1.exon7;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 15582 15654 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 15243 15421 . - . ID=g10764.t1.exon8;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 15243 15421 . - 2 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 14529 14652 . - . ID=g10764.t1.exon9;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 14529 14652 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 13925 14074 . - . ID=g10764.t1.exon10;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 13925 14074 . - 2 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 13482 13645 . - . ID=g10764.t1.exon11;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 13482 13645 . - 2 ID=cds.g10764.t1;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 12681 12926 . - . ID=g10764.t1.exon12;Parent=g10764.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 12681 12926 . - 0 ID=cds.g10764.t1;Parent=g10764.t1 #PROT g10764.t1 g10764 TNTRSQAVDGKDVRASVAAQGLDRDLQVFAAQGAAAGVASAFHAPLAGVLFTLEEVMSSFHPRLIFRTFLTTAVAYWVTALVYQGRALKIYDFTLYGDDSQCTLNIYPEDFFAYAFLGIVCGLLGAAFNNTVVFLSKLRERHVVPFPLRRVCEALLVTLITTTIVVCVPKAAYNCTPLSQTLRHASVLGKCNTTGGVAVFDDVSHLCVPWDVQVLVSVNYLDGNSSGTCQSLAWYAYAGVDTEGMRVNEGDDPDNIVVEDVCYYQMMSLLQVIPSDALRNLLRRGVYDTFSAGTLAVFAFVYFFLMTITVGIAIPAGSVLPSLVFGAAIGRLTAIGYNSWIKIPMRGQLVDPGLFAVIGAAGFWGGFARLTMTVTLIMTEITASSDALPGIIIALVFSSWIGDLLSHPLYHALLHTSKVPFLDHEPDRALSLVDSSSIMASPVVTLTRVVGVDVIRRTLAQCTHGGFPVLEGKGVDEGKLCGLVLRRQLESFLSHSRGVESAHGVDGDNGAAFAQDYVGGAVDLSHHMNRSPTTVLGTFPASKSYRTLRQLGARHLVVVDRDYKVVGMLTRKDFIYASDSHDHDNKHTGANQDDSSGHVNHRGSSPLTRRRSSVLQERVSVSAVNASALDSSGASLTEPLLSSEA* # PASA_UPDATE: g10760.t1, single gene model update, valid-1, status:[pasa:asmbl_8964,status:12],[pasa:asmbl_8965,status:12], valid-1 NODE_702_length_18862_cov_41.3159 . gene 157 4394 . + . ID=g10760;Name=g10760.t1 NODE_702_length_18862_cov_41.3159 . mRNA 157 4394 . + . ID=g10760.t1;Parent=g10760;Name=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 157 268 . + . ID=g10760.t1.exon1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 157 268 . + 0 ID=cds.g10760.t1;Parent=g10760.t1;5_prime_partial=true NODE_702_length_18862_cov_41.3159 . exon 740 941 . + . ID=g10760.t1.exon2;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 740 941 . + 2 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 1210 2464 . + . ID=g10760.t1.exon3;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 1210 2464 . + 1 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 2576 2641 . + . ID=g10760.t1.exon4;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 2576 2641 . + 0 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 3035 3174 . + . ID=g10760.t1.exon5;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 3035 3174 . + 0 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 3594 3751 . + . ID=g10760.t1.exon6;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 3594 3751 . + 1 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . exon 4141 4394 . + . ID=g10760.t1.exon7;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . CDS 4141 4325 . + 2 ID=cds.g10760.t1;Parent=g10760.t1 NODE_702_length_18862_cov_41.3159 . three_prime_UTR 4326 4394 . + . ID=g10760.t1.utr3p1;Parent=g10760.t1 #PROT g10760.t1 g10760 VDPDLGFLDHFVAEALASGAQRYLRPDERAALVPQSESRVSLKDQPKPSSLNFEPYDAPVLRQPHVAPATFEELRQSSTASASGVLSQSNDRPLAAPDAAVVREELSIADIPVTNVKRVWGRQGYAKDDHISANRPDAHSSSHVDAQSTASASTIAALPTAQTPRASTDAPVAWTQPALTDAATPAERKRHELASALFSGVASTGASSAVSSTATSLSNSANAGSSSLFRSKSGDTSSKLLARQPQQATTQPQQATAVSLPSNSAAFVNVTAASAGSTARSGGSHVTSASGSSFAADLGLLVDYNPTHVTAAAQQPQHAAPTLLSSGGTAIGGTVGIGGIPSYGSASVGKAAPLAVGIGASGGVFVAPPPAQPLSSLQPHQTVHLTQSARTGLYSSSMNAGGGLSGGIAGDLLSLSIDDAVPSGAPLLPASQLHTGTTPRPQSSTSLAKAPSSAEVASFVPDRLRHYPRGDMDQEASNDGVLRVSYCKVWADTSLALAFQFANIGQSNIRAVRISVAVPTGLQLLRGDGFDAGEIEEAIITAGSKTRRVFGLSFSGFASSYTLSAKVTYTDDKGASKFSNISLALPISDIMRPARLTTADFGAKWPTLAGAERRQTISGGSVRTASELLDRAKGALKAHAVEMIGEEGLAAAKILQTQHVMLLHGKVSGQQSGHLSGHRELEVLVRSPDIRFTEAVVRQCAVVFK* # ORIGINAL: g10763.t1 original gene structure, not modified by PASA NODE_702_length_18862_cov_41.3159 AUGUSTUS gene 7889 11831 . + . ID=g10763;Name=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS mRNA 7889 11831 . + . ID=g10763.t1;Parent=g10763;Name=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 7889 7933 . + . ID=g10763.t1.exon1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 7889 7933 . + 0 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 8354 8500 . + . ID=g10763.t1.exon2;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 8354 8500 . + 0 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 8966 9069 . + . ID=g10763.t1.exon3;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 8966 9069 . + 0 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 9483 9631 . + . ID=g10763.t1.exon4;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 9483 9631 . + 1 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 9897 9982 . + . ID=g10763.t1.exon5;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 9897 9982 . + 2 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 10278 10423 . + . ID=g10763.t1.exon6;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 10278 10423 . + 0 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 10860 10931 . + . ID=g10763.t1.exon7;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 10860 10931 . + 1 ID=cds.g10763.t1;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 11372 11831 . + . ID=g10763.t1.exon8;Parent=g10763.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 11372 11831 . + 1 ID=cds.g10763.t1;Parent=g10763.t1 #PROT g10763.t1 g10763 MALSRFLASARKSALAFAESFSKESHSNRVFHAVMGNEASDYDSIASSIAYALYLNEKSESREEGDISVIPVMNIPKSDFRLRTDAAHIFTRLGLDHESLVFLEDADLRRYAGAGRLRLTLVDHNALCNTQRDLESTVVEIIDHHVDEGKHSAASREIAMVGSCCTLVTERLVASGKSTPMDSALAALLLGAIVIDTVNLDASKGRCTPRDVAAADTLEPSSSINRQTLFDELRAAKYSIESLTTSELLRKDYKEDVFGGVRIGVSSVSVSLSDLVARSNGRFAEECALLSSNRTLDVTCVMTAFFDGSSSTSTGVDAARTQADNPDKFRRELFLLASNDKGRAAVRSILSSPTTTAELSLETVASHPASDAVANGDGTACEQRNLRASRKVVIPLLRQVLA* # ORIGINAL: g10762.t1 original gene structure, not modified by PASA NODE_702_length_18862_cov_41.3159 AUGUSTUS gene 6360 7119 . - . ID=g10762;Name=g10762.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS mRNA 6360 7119 . - . ID=g10762.t1;Parent=g10762;Name=g10762.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 6688 7119 . - . ID=g10762.t1.exon1;Parent=g10762.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 6688 7119 . - 0 ID=cds.g10762.t1;Parent=g10762.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 6360 6560 . - . ID=g10762.t1.exon2;Parent=g10762.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 6360 6560 . - 0 ID=cds.g10762.t1;Parent=g10762.t1 #PROT g10762.t1 g10762 MVAGRELGEPPTQEGQNSSAIRRRHRFRLFLLPTDDRGSRGYTKREAQNRRERFEANKLWTTFLEMEKGEKTSTEAIAAFVYQIHSIVLFSIEAGLPIGRLRSMQRLYKAARKLLLQRDPAHKSQARECPQDQRRARVSVIGKSQMGPSPPGAPNVEAGPGPDCALAGDRPKSSQEEPPALTLPLVAPSADTEELFMATFYPEVYMAQWL* # ORIGINAL: g10761.t1 original gene structure, not modified by PASA NODE_702_length_18862_cov_41.3159 AUGUSTUS gene 4872 6036 . + . ID=g10761;Name=g10761.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS mRNA 4872 6036 . + . ID=g10761.t1;Parent=g10761;Name=g10761.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 4872 5807 . + . ID=g10761.t1.exon1;Parent=g10761.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 4872 5807 . + 0 ID=cds.g10761.t1;Parent=g10761.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS exon 5881 6036 . + . ID=g10761.t1.exon2;Parent=g10761.t1 NODE_702_length_18862_cov_41.3159 AUGUSTUS CDS 5881 6036 . + 0 ID=cds.g10761.t1;Parent=g10761.t1 #PROT g10761.t1 g10761 MGDRYPFRNAVLLLNNSILAAALPFLQKTSMRQQDAEGNVEYNVFLLSVFVYIGCTVSSALFYFVVMGGRIPALPFTCDTIDGHLRTHTQSSHYTTCDVQTNSTESEDVFDTLSTLADSQRRRFQSGDVGYVATFRSLTRLIITRWRFAVPSLAFAITDNVEYLVLRHYRGSDVLVINNVSILITAIAVCACFGVRMGRGTIFSLVCIGTAVALWESDCTNLSLPLYGFDNVDDAVDDAGSGDGLNIILSYVVFRACAVVVNDYVVVVHEQDHAVLQVFVMSAYQCIFGVATYAILTLFVPIMPWTCPITLSPMAITLSDVVSIVFVAALERVFRGTTLRWESHLSIILLSVGLGLYAYFSAV* # ORIGINAL: g14417.t1 original gene structure, not modified by PASA NODE_2729_length_5304_cov_41.6724 AUGUSTUS gene 3703 5181 . + . ID=g14417;Name=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS mRNA 3703 5181 . + . ID=g14417.t1;Parent=g14417;Name=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 3703 4035 . + . ID=g14417.t1.exon1;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 3703 4035 . + 0 ID=cds.g14417.t1;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 4247 4280 . + . ID=g14417.t1.exon2;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 4247 4280 . + 0 ID=cds.g14417.t1;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 4463 4630 . + . ID=g14417.t1.exon3;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 4463 4630 . + 2 ID=cds.g14417.t1;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 4834 4896 . + . ID=g14417.t1.exon4;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 4834 4896 . + 2 ID=cds.g14417.t1;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 5108 5181 . + . ID=g14417.t1.exon5;Parent=g14417.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 5108 5181 . + 2 ID=cds.g14417.t1;Parent=g14417.t1 #PROT g14417.t1 g14417 MRSMSIAGASGLAPEEVRGLLDSDDASATGDDDDALLDIPEGSNQGAGTIVSSTGLGSGSGSGARPRDDARPLGFQTALNASGGAGASGGNAVSGSADGRGAGKRQRLPGRIKRNFQALTALVGSERSGSPSSHLGFLRRRTPQYSRRTSTVSNPEDYDDGGDLDQGPPPVYEDYTTIDWVRDNTRDRVRLAKLRAQKVWEFQGLGDAPRRSLGGLAGRIRNR* # ORIGINAL: g14416.t1 original gene structure, not modified by PASA NODE_2729_length_5304_cov_41.6724 AUGUSTUS gene 275 3174 . - . ID=g14416;Name=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS mRNA 275 3174 . - . ID=g14416.t1;Parent=g14416;Name=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 1855 3174 . - . ID=g14416.t1.exon1;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 1855 3174 . - 0 ID=cds.g14416.t1;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 1243 1589 . - . ID=g14416.t1.exon2;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 1243 1589 . - 0 ID=cds.g14416.t1;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 953 1106 . - . ID=g14416.t1.exon3;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 953 1106 . - 1 ID=cds.g14416.t1;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 667 848 . - . ID=g14416.t1.exon4;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 667 848 . - 0 ID=cds.g14416.t1;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS exon 275 488 . - . ID=g14416.t1.exon5;Parent=g14416.t1 NODE_2729_length_5304_cov_41.6724 AUGUSTUS CDS 275 488 . - 1 ID=cds.g14416.t1;Parent=g14416.t1 #PROT g14416.t1 g14416 MEEPMEVDVGVDAQATAKLTLVHQRVFLSVSLSRRTLAGHVELEYTADDGPSPKGAHVSRAALSGEGATAGGEASQMLPLPRTIALHCFRCRLREVYVDGIRVRDFILGDPFAEPLAPSRTFHFDAAVRACEDPELRIPIPDGAGATRDAEGMRRLTVRIEYTVKEPGGGVHFALPSHRTYVDRPPHAFADIGVGGPRQWMPCVENRRERCRWTIELSVAAEYMVIAGGILEQQLRVVKGDRRVFRFGVHAPASALEIGFAVGKFDVLCDPDVPHVTYFAPSGMLAELTHSTESFSYAVTECCRYLGVQSHGQRQQFHHQHHHQHQRAQSRQGKADSPGNPALPFGAYSVVFVDNCMAPFASFAGGAFLHVRLLHSRRVLDQTRESRATFVRALTCQWFGHVVVPASAADEWIVGGIASFVAEVVLRLPRMLGDNEVRHEMGEWIEDAARRMHDKGEERYVGRADECLHPLVSLAIPDEKSKPATAEEGAVARRMRGPIAMSAVARAIGAEAIKGIVRGLLDGSGADDSKKSDKGHKSDRRRLVEIDVKRFEKKLRSFLDHRGHSLYIEFTDRLCVRMAFKFFEDGRKLTITQNLPGETPDEKPFVKGKMLIRWRETDGTERDEEVVIDKAEVVHELPSYGKPQRKQSRRIVLATGQEVDLDMDFAEKREVPVLYLMLDPDLLWVTDPSVPQAACEWFREGHVSGSQTSVPEYVWLFQALLERDVIAQERVGVADGVS* # ORIGINAL: g4791.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 37695 41625 . - . ID=g4791;Name=g4791.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 37695 41625 . - . ID=g4791.t1;Parent=g4791;Name=g4791.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 41500 41625 . - . ID=g4791.t1.exon1;Parent=g4791.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 41500 41625 . - 0 ID=cds.g4791.t1;Parent=g4791.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 37695 41300 . - . ID=g4791.t1.exon2;Parent=g4791.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 37695 41300 . - 0 ID=cds.g4791.t1;Parent=g4791.t1 #PROT g4791.t1 g4791 MLTLTVLFIGLAGFVLYWWRRSNRYAVLAKNGGSTPRRTVSTETSAVSDAFRAHLSRRPNGASQTQQQSPSRVFYQTSVAAPYEVNLRFPETAPQQTVASRQAVQSKREYDAPIMIKIAAPEQQIAPANIGRRTPPRKATPSRADDAWSNVGKRGSPSFGAASASLALATSPETLPPLSSMAPLAPSGPLEPLDRDVNLEQTTAGSPVAKGTRKRRGSPMPADGNRIDSQGASKARRTGKTRAEADEEDGVVPMDVSALETPRRSLRRRAEQTDADADADRPRDGATKVRRTLADKGRENAPAATSTPEQALPGTTHRKVEASPKSVSAKLLASPLSPGRSPITPGGGKKVASTASGRAKLQGGRVGLSAAAVRGRHPNGAPMQWEDAEADDHARVEDMLKTATEDAEQKAQAATEAKEAPLKSILKRTPNGTTDKAAQKDAPTAGAPPLPSGGLFGVASGNATATATGTGALSNNNNTPALSFGLALAPKATTTATTQPTAPALSTAPTSTPAPVTKDASAAPAVSFGLGQLASSTGDIAKQTATPLFSLSTAQTGNIPATTTPAANTTAAPGAGGFTFGMPSTTGTASTGSLGLPAAKSAGAVAAAAPTQRAPFTFGVQEPSAVQPTAQPTAVLGVSFNGSQATPQPNATGGVLSTAPAAAPSSGGHGLFGVASSATTTAPTSAFGASGASTAPGGFTFGGGAKTATAPAPTAAPALSMATTTAPASNTPVSFSFGGGGAATAPSFGTATAPSFGTATPAQQQTTGTMFGQTAAAPMAFGAPSAATTTTAGTPGAFSFGAPSSQAGAASAPSGNASFSFGGVPSAGLSGANSATPFGASTAATTATPATATPAGAFGFGASQPGAPGATLGTPSGFSFGGATTNNSTPAGAAFGFGAGNVASATPAPGGFSFGGSTGAAGTAPTAGGMSFGGNSGATAAAAPAAGQGTGQFAFGGNAGGMAGAGQGKAAGGGFTFGGNTQPAPVGFGGAQPTTNAFGGAQPTSNAFGGAQPTSNAFGGAQLTTNAFGGAQTTSNAFGGAQPAANAFAASTAQPTGFNFGAAPAQKAAFGAPAQANAFGGASSAGFSFGGASSAASPFGAPQQQQQQQQQQPQQQQAGGAFGASFSGAPSGGFTFGNTQSGAGTAPAPGGFVFGGGTQAQQPSTGGFTFGGGGQTAQSGMGATGAGGFSFGGNTQAAAAPAFGQPQAGGAFGAPAQGAPSGYDLGATSGRPMAKPVRRNSRR* # ORIGINAL: g4784.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 8738 9265 . - . ID=g4784;Name=g4784.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 8738 9265 . - . ID=g4784.t1;Parent=g4784;Name=g4784.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 8738 9265 . - . ID=g4784.t1.exon1;Parent=g4784.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 8738 9265 . - 0 ID=cds.g4784.t1;Parent=g4784.t1 #PROT g4784.t1 g4784 MESFDSAQPRIRRRLQFNNRDETAASARALFQSKPVLQLQCGFCESQLCLRGMRAILLADVSVELFSTDMPPVRRVDLVGDDFMTKNCLCKIRNFCCLTCGNTMGYHVTKPCMMCLAGCNNGHFWMFHSDAVRASERFDPRTGTVMFWSQVPCANDDSVGLVVADDTMAKDECCR* # PASA_UPDATE: g4790.t1, single gene model update, valid-1, status:[pasa:asmbl_8687,status:12], valid-1 NODE_64_length_46835_cov_40.7101 . gene 35760 37351 . + . ID=g4790;Name=g4790.t1 NODE_64_length_46835_cov_40.7101 . mRNA 35760 37351 . + . ID=g4790.t1;Parent=g4790;Name=g4790.t1 NODE_64_length_46835_cov_40.7101 . five_prime_UTR 35760 35806 . + . ID=g4790.t1.utr5p1;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . exon 35760 35829 . + . ID=g4790.t1.exon1;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . CDS 35807 35829 . + 0 ID=cds.g4790.t1;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . exon 36337 36548 . + . ID=g4790.t1.exon2;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . CDS 36337 36548 . + 1 ID=cds.g4790.t1;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . exon 36986 37351 . + . ID=g4790.t1.exon3;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . CDS 36986 37206 . + 2 ID=cds.g4790.t1;Parent=g4790.t1 NODE_64_length_46835_cov_40.7101 . three_prime_UTR 37207 37351 . + . ID=g4790.t1.utr3p1;Parent=g4790.t1 #PROT g4790.t1 g4790 MGRMHTPGKGISSSALPYRRTVPAWFKSSSEDVKEQIYKLAKKGLTPSQIGVILRDSHGVGQVRFVTGNKILRILKAKGMAPDIPEDLYHLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYKRTRALPPNWKYESSTASTIVA* # ORIGINAL: g4786.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 12247 16672 . + . ID=g4786;Name=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 12247 16672 . + . ID=g4786.t1;Parent=g4786;Name=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 12247 12534 . + . ID=g4786.t1.exon1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 12247 12534 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 12771 13391 . + . ID=g4786.t1.exon2;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 12771 13391 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 13810 14323 . + . ID=g4786.t1.exon3;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 13810 14323 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 14528 14636 . + . ID=g4786.t1.exon4;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 14528 14636 . + 2 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 14830 14970 . + . ID=g4786.t1.exon5;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 14830 14970 . + 1 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 15268 15361 . + . ID=g4786.t1.exon6;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 15268 15361 . + 1 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 15661 15816 . + . ID=g4786.t1.exon7;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 15661 15816 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 15947 16129 . + . ID=g4786.t1.exon8;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 15947 16129 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 16517 16672 . + . ID=g4786.t1.exon9;Parent=g4786.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 16517 16672 . + 0 ID=cds.g4786.t1;Parent=g4786.t1 #PROT g4786.t1 g4786 MDRGNEDPMAEWLKSERKRRRSDEDDGSTDSSGDRKDRKHRRKERNEKKDKKDKRDKKDKKRERKDKHKKSRSEKDGSGSALSSEVDARHDIVVPKAITEVAGATVQRDSWMTRPSRDAPAPVLGDSTLAHVASAAAATAPPSNWRERLLGLQAAAHIHAQSPSAASPEDKERRNVPRNDSEFERMAAKKEFLRPVANAPHRRSQVQAPRVAAAVESLGSRDSVAGSQSAMASAGALAGDCRSEGRVDAAMRDSASVEQATKVSAVVVEQSDVPVAAAASDGAGPRGQDSPAVTVPTEKELNQIAARLMRAEMMGDDALAATLKQRLEDGRRLAAASVPGSRLPHDNRPIPADRRPPLSRDAPRDVHRGRREDSGGEERDVGRDGRREEVHVLASVTRSGAAIPLSQRTIDAANASVESAAEVGRRKRNKMGSDGAGLSITDMVREERADDGSRYDGDMARSIATAVQYMREVDGEGHTGKFHDNDDEMAPDVADLFERGNKTRNARDEERTVAKAQRQASQASKFQEKCIRCLDGPSGLKHVVVSHGISAYLALPEREPLCDGHCIIVPASHVAAINMVDEDVWDEIQIFKKFLTKMFAGQDKDVVFIETVMGLKFQPHAVIECIPIPAEEGAVAPMYFKKAITEAGSEWAQHRKLIDTKGRGIRRSVPPGFPYFNVEFAMDGGYATVIEDEVKFNKLFGKEIVGGMLDIEPHVWTRPRTESSARQAERRRHFEAQWKPFDWTVRLRDDKRG* # ORIGINAL: g4788.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 22818 27318 . + . ID=g4788;Name=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 22818 27318 . + . ID=g4788.t1;Parent=g4788;Name=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 22818 23044 . + . ID=g4788.t1.exon1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 22818 23044 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 23267 23407 . + . ID=g4788.t1.exon2;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 23267 23407 . + 1 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 23718 23835 . + . ID=g4788.t1.exon3;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 23718 23835 . + 1 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 24056 24172 . + . ID=g4788.t1.exon4;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 24056 24172 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 24383 24494 . + . ID=g4788.t1.exon5;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 24383 24494 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 24783 24949 . + . ID=g4788.t1.exon6;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 24783 24949 . + 2 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 25237 25342 . + . ID=g4788.t1.exon7;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 25237 25342 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 25753 25881 . + . ID=g4788.t1.exon8;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 25753 25881 . + 2 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 26053 26153 . + . ID=g4788.t1.exon9;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 26053 26153 . + 2 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 26395 26529 . + . ID=g4788.t1.exon10;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 26395 26529 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 26884 27318 . + . ID=g4788.t1.exon11;Parent=g4788.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 26884 27318 . + 0 ID=cds.g4788.t1;Parent=g4788.t1 #PROT g4788.t1 g4788 MDYLSIYNAVVHIADAVNVEEDSDRVRLSRLFRIVFTAERTSVALSSHSNSANIETLYASDYKKSMQAAADWLYDWATNTPLAPDQFEEGEWGFSNYTPRVIDVEAPREQRSLTKLIEQWTATFEVVKKCYARSLRELDDQLNKAAKATDKKSTAPAGLVEKEDVFGSKTLQAFDLTSDWCLGVAACTLFLCVLAEMTQAKELYATCINHAHSIAGDVVNTVMMKLQAHMEWSEEFVRVELFAKSAKEVAKVATQNSAPLSQFSAKRLRQTLYKLRLLDQSLSVFDIFLFPKTIKVHTAALKSISFSTIEPGMVLTAGYDTLVKITNFKARECIAQYVGHQSIVTGCCFARKDMVIVTCSFDQTLRIWNSQTAACLKVLHGHTDGVTSCDVSRDDKYIASGSLDLTVRLWDLIKGDAMRVFKAHDQWVKAVRFTTSEITAVISASLDKTIKVWDFLNRDRNIPLRVIDHHTDYVLDVCVRGRAIVSTSRDRTTRVFDLLTGEQMHIAPPAQPNWSCTAAISADGKMYAVGSFDNRVMLHETATGKLLKSIKVNANGISCLAFPPAGRKFILCGTESGYLQKIPLLAFESPPAPAS* # PASA_UPDATE: g4792.t1, single gene model update, valid-1, status:[pasa:asmbl_8688,status:12], valid-1 NODE_64_length_46835_cov_40.7101 . gene 42464 45709 . + . ID=g4792;Name=g4792.t1 NODE_64_length_46835_cov_40.7101 . mRNA 42464 45709 . + . ID=g4792.t1;Parent=g4792;Name=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 42464 42992 . + . ID=g4792.t1.exon1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 42464 42992 . + 0 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 43196 43524 . + . ID=g4792.t1.exon2;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 43196 43524 . + 2 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 43783 44250 . + . ID=g4792.t1.exon3;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 43783 44250 . + 0 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 44557 44745 . + . ID=g4792.t1.exon4;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 44557 44745 . + 0 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 44888 45181 . + . ID=g4792.t1.exon5;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 44888 45181 . + 0 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . exon 45370 45709 . + . ID=g4792.t1.exon6;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . CDS 45370 45606 . + 0 ID=cds.g4792.t1;Parent=g4792.t1 NODE_64_length_46835_cov_40.7101 . three_prime_UTR 45607 45709 . + . ID=g4792.t1.utr3p1;Parent=g4792.t1 #PROT g4792.t1 g4792 MVPRVVAILGRMRSALHPRCAVMPVTPVGKVNAFSSVMRSSHSLAPHRPLCVAPGELCGLGGLPPRMPARLFSASAPTQFPVGPISEKTKMIRNVAIIAHVDHGKTTLVDQLLRQSGFALDGERVMDSNQLEKERGITIMSKCTRVEWKGHVLNIVDTPGHQDFGGEVERVMAMVDGVVLVVDATEGPMTQTKFVLGKALKGGLRPVVVLNKADRSTSRLDGSVVDEIFELFVALEANDAQLAFPVLYASAREGWAVESMDDPKKGMQPLYEAIISHVRHPDSSEEDPFKMLVTNIEYDSFVGRVVTGRISGGRVAIGSRVVALNREGVKHDDNRVTKLFVRRGMIRTDVTSASAGDIISLAGVAGDVTDTVCDPSVTEAIHAEPIDPPTIAMTFAVNDSQLAGKEGKYLTSAAIKDWLFKERENNVAIDVRDAPGNREQTEVSGRGELQLGILIERMRRDGFELSVSPPRVLFRVDKETGSKTEPNEDVIIDANESDASMIIQKLQTRGAEMSEYKTAGEGRVRLKFVVPSRGLLGFASELKSDTRGTSIMNSSYIGHMPLNPRVTQGQRKGKLVSMALGKATGYALNDLQERGTLFISHAQEVYPGMIVGEFNKGNNDLEVNPTRSKKVTNVRTMMKDDNIMLTPPRTFTIEEALTYIADDEMVEITPSSVRLRKQKRS* # PASA_UPDATE: g4789.t1, single gene model update, valid-1, status:[pasa:asmbl_8684,status:12], valid-1 NODE_64_length_46835_cov_40.7101 . gene 29132 35206 . - . ID=g4789;Name=g4789.t1 NODE_64_length_46835_cov_40.7101 . mRNA 29132 35206 . - . ID=g4789.t1;Parent=g4789;Name=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 35098 35206 . - . ID=g4789.t1.exon1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 35098 35206 . - 0 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 34822 34962 . - . ID=g4789.t1.exon2;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 34822 34962 . - 2 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 34381 34595 . - . ID=g4789.t1.exon3;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 34381 34595 . - 2 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 34109 34263 . - . ID=g4789.t1.exon4;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 34109 34263 . - 0 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 33797 33918 . - . ID=g4789.t1.exon5;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 33797 33918 . - 1 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 33510 33633 . - . ID=g4789.t1.exon6;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 33510 33633 . - 2 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 33119 33266 . - . ID=g4789.t1.exon7;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 33119 33266 . - 1 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 32773 32967 . - . ID=g4789.t1.exon8;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 32773 32967 . - 0 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 30660 32619 . - . ID=g4789.t1.exon9;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 30660 32619 . - 0 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . exon 29132 30445 . - . ID=g4789.t1.exon10;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . CDS 29490 30445 . - 2 ID=cds.g4789.t1;Parent=g4789.t1 NODE_64_length_46835_cov_40.7101 . three_prime_UTR 29132 29489 . - . ID=g4789.t1.utr3p1;Parent=g4789.t1 #PROT g4789.t1 g4789 MESEYIIPAGKDDVLVGELGYKAAGASRASLENDLEDIAERIAENGPMVILESGVYDMLCGIASYYSEVESGPKRLCWDILVSVAAQLCDVVNRTFESLPQGENVDGETSRHLRSALKMNAFLLNWVMSQMEAEENANSRAEALSGAGDTDGKGKGKKGAKKTNKGADRGWEWSVQKEKAVSTMNALAQSEMARLWDMACVEEAFVTLFSRSAYMLLESAGNLKNKTIRDGVFHLLGALVQRYNHAMATVTSVVHLLPLFEHLSQPFAQMLGVFAHEYECATIATEVMREIGRMSAADLARDASGAKYIASFLVELANVLPETVLIGIDSVIAHLDGESYTIRNAVLEVLGRLISKCLVKSATDESRALRDTYFDLLFERLLDTNAFVRSKALQVWQALAEERAIPLVRRRPLTDAAIVRLSDKASVVRKSSIQLIGTLMRCNPYGSELRLSVLKKKLEEESKTLQALVDAPDAAVVSAVDGDAPADAASAATDGVARQRTVVRYFEDAMRFTEQLDSAVPLLCQLLGSTAQSDACEAIEFFVEARSFGLETASDGVRKMLSLVWAREQSVKDAVISAYSRMIVPADDGTGKIASPAAIARNLIDMTHGATLGDLTSLEELVVEFVARGIVQPAVFRCLWDVFSGKVAQATKAQMRGSLSVLIMASAGEPDIMRGNIASIVACGLGQESDWDTRRLACVALQRMVGTSGPGRSKRAAAPVQPSSSSQGQPATPAVDMRRLPMADPLFVRLCELVVAEAADAGNAWFGFCEQAIGAIYALAEGPDVLCEGVLRSLSARVFGSSTSKGQTCMSTSLSRLIFAVGHVSLKQLVHLDAVQSELKRRREAEATQAASESKARASRKSVGGHGSSSIEDELGMAAAADDAETEAIMRCCEALVAAEANNGLGFLAAYAPLVTKVCVDQKTYADGHLRASAALALCKMMCVSSRFCEANLRLLFTVLKQSPEPAVRSNIVISLGDLAFRHPNLVEPWTPHVYARLRDRDERVRKNALMVLTHLVLNDMIKIKGQIGAMACCLEDPSQRIADLSRLFFHELAKKGNTIYNVLPDVISQLTSDSASRVDSAAFRRIATYLFSFMQKERQGEALVEKLCHRLRATRDTQQARDIAHCVTLLGLGDKGVRRLLDLFPCIADRLTDDDIRGSFLATVAKARKFAKPETKAVLDEIESRIQRKARGDVDGEGASGADADQTSAALDVTAGGTGGGSAGLDLGSDEDANVMARPESKPAVAAAGVSGAGKGGSATAKPLSGAGGRKAVAARGAKAAPAKKKGGKAPARGKAATADSEDASDSDPSVVDELDTGSDDADDAVENRDPKRNAPAPAARRGASATTAKGAAAGRRRVQRRVVSDSGDDVDF* # ORIGINAL: g4782.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 698 2981 . - . ID=g4782;Name=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 698 2981 . - . ID=g4782.t1;Parent=g4782;Name=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 2920 2981 . - . ID=g4782.t1.exon1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 2920 2981 . - 0 ID=cds.g4782.t1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 2570 2698 . - . ID=g4782.t1.exon2;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 2570 2698 . - 1 ID=cds.g4782.t1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 2244 2448 . - . ID=g4782.t1.exon3;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 2244 2448 . - 1 ID=cds.g4782.t1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 1871 1986 . - . ID=g4782.t1.exon4;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 1871 1986 . - 0 ID=cds.g4782.t1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 1304 1484 . - . ID=g4782.t1.exon5;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 1304 1484 . - 1 ID=cds.g4782.t1;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 698 991 . - . ID=g4782.t1.exon6;Parent=g4782.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 698 991 . - 0 ID=cds.g4782.t1;Parent=g4782.t1 #PROT g4782.t1 g4782 MPADRVALITGANTYPPRKCSVQKAAEAVKEILDACPSAKVDVLQIDVGNAASVLSAAADFRNRYARLDYLYLNAGIMPVTSINWGGFLPITPSHVFHVLSTGDGMLKQADAVGKDGLRSIFATNVFGHYVLVRELESLMERTGKARVIWTSSNAANKEQFSITDIQHSSGKNPYGSSKHAIDLLTLSLNERLNPKGITVYTMCPGLVMSQLTYNFLPRWFWTMLFPFFLLMRLFVQTLNVTPFNGAEALVHLGLHPADVNEASSSKKEAVAPRTDHKYFSRCNALGHLYSGSHPLGLDIVESRKLHAQLDALAVDFGSRRKGQSVQR* # ORIGINAL: g4783.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 5766 7275 . - . ID=g4783;Name=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 5766 7275 . - . ID=g4783.t1;Parent=g4783;Name=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 7246 7275 . - . ID=g4783.t1.exon1;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 7246 7275 . - 0 ID=cds.g4783.t1;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 6966 7040 . - . ID=g4783.t1.exon2;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 6966 7040 . - 0 ID=cds.g4783.t1;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 6304 6621 . - . ID=g4783.t1.exon3;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 6304 6621 . - 0 ID=cds.g4783.t1;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 5766 5918 . - . ID=g4783.t1.exon4;Parent=g4783.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 5766 5918 . - 0 ID=cds.g4783.t1;Parent=g4783.t1 #PROT g4783.t1 g4783 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVREKWVPEITHHCPKTPFLLVGTQVDLRDDASTIEKLSKNKQKPITVEVAEKLGREMKSVKYVECSALTQKGLKNVFDEAIIAALEPPEVKGKKKCILL* # ORIGINAL: g4785.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 10276 11244 . + . ID=g4785;Name=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 10276 11244 . + . ID=g4785.t1;Parent=g4785;Name=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 10276 10281 . + . ID=g4785.t1.exon1;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 10276 10281 . + 0 ID=cds.g4785.t1;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 10401 10487 . + . ID=g4785.t1.exon2;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 10401 10487 . + 0 ID=cds.g4785.t1;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 10857 10938 . + . ID=g4785.t1.exon3;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 10857 10938 . + 0 ID=cds.g4785.t1;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 11099 11244 . + . ID=g4785.t1.exon4;Parent=g4785.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 11099 11244 . + 2 ID=cds.g4785.t1;Parent=g4785.t1 #PROT g4785.t1 g4785 MVKYSLHLKANLENIKDLRPEDNEEFRWQLKDEVDVSGSRGSAQLVSKCKMCSRESSIEVIKGSLKPYNGGGFKSILQIECRGTEPVAFDPRVRKCLNVGLIDSVS* # ORIGINAL: g4781.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 95 202 . + . ID=g4781;Name=g4781.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 95 202 . + . ID=g4781.t1;Parent=g4781;Name=g4781.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 95 202 . + . ID=g4781.t1.exon1;Parent=g4781.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 95 202 . + 0 ID=cds.g4781.t1;Parent=g4781.t1 #PROT g4781.t1 g4781 AFARLLDGTKTRPAIEPDDVDIVAYGDDEIKIARR* # ORIGINAL: g4787.t1 original gene structure, not modified by PASA NODE_64_length_46835_cov_40.7101 AUGUSTUS gene 18183 21873 . - . ID=g4787;Name=g4787.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS mRNA 18183 21873 . - . ID=g4787.t1;Parent=g4787;Name=g4787.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 19890 21873 . - . ID=g4787.t1.exon1;Parent=g4787.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 19890 21873 . - 0 ID=cds.g4787.t1;Parent=g4787.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS exon 18183 19750 . - . ID=g4787.t1.exon2;Parent=g4787.t1 NODE_64_length_46835_cov_40.7101 AUGUSTUS CDS 18183 19750 . - 2 ID=cds.g4787.t1;Parent=g4787.t1 #PROT g4787.t1 g4787 MTRRLLHMRACALIVLCAAAAAAPALNFINDDNPAGDSDLYQTIRSRGLTEFAGYVTTAGMQQMLTSTLSRFTVFAPTNAAFARLTQEQRRALTDPTTLTELMRYHLLSGEVPSRTMGDDLLLPTLSANRDIRINMYGTKDNERFYANGAELRPADVTASNGILHVIDTVLFPPTQTITAFVAAEKDFSRLSDMLTAGKGETAKLLDGVEPYTLFAPTDDAFAKLPSATLDYIRTHDPQLLDEMIAGHVMKGTLYQGGMADGATETALSGDTLTFTVSPAGLHSVNGAAISKPDLNVINGVVHGVDSILFPPANAFRKLILLGLTDFATLVDKAGLRDMLSRPEQTFTLFAPTNDALATLTDAEQSALKNPDVLMRFVRYHMAGGAIKSSDLRNEEVVPSLDAPFSVRFNTYGSELFANGRRVVARDQQATNGVIHTVAGGPLTSPTLRTASTTAYEEILRRPDTKVLANAMSVDPEFAAVLKASSPLTAFVPNDAAFAALPAGTTALLRKYPTALASVLKFHIAGGTYYTGGLSPGMAIKSLNGQTLNIGADDKGALTVNGVPIVTADTSVSNGVVHTIGTVLFPVGNVFETVIFNGMKELAARLDSTGLAQTLQDQTKRFTLFGFQDVALARLSPDAIKAMDDPKMLRAAIAYHISDRIEPSSQLTDESIVPTMGGVPQVPGVRINIYAATQPKTEPTMYVNGRPIVQTDIACSNGLMHVIDGVLFPLPAPSVADILNFDPRLEGLRNLTAAAGIGALLAGKGPITLFAPTEDALRKLPEGVRGILLANPQVAEGILRYHIALHTLYSPALYNGAVIKTASGSNMHVTRDEGGAIRIGSATVLEHDYSAGNGVVHVIDELLIPPHRDLMQEAIFGGLSEFLGLATASGIDQLLSGDQPVTVFAVSNGALSRLSQPIRDRLAHDATFLKTTMQYHVVQGAVPVEALTNDRVFRSLAPTRALLRSNMYADKYYINGVPIVGGTAAAVNGVLHILEDFVFPPTESILDHLYSDGRFTTFLDHLRVTGLMASINGTTAFTVLPPTDEAFAAADPERIAAWGSDIDDRRRMVLNHIALTTWMRRGLATQTSLPMLSGEKLPVSVNSDGVLLIEGTAPTQPDLLMTNGVVHTMGVVLDPGATAPAGGKGSNNHLGLILGITIPVAVVVAAIGLFLYKKTRHSEYTRI* # ORIGINAL: g7597.t1 original gene structure, not modified by PASA NODE_479_length_22862_cov_41.6361 AUGUSTUS gene 5236 6845 . + . ID=g7597;Name=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS mRNA 5236 6845 . + . ID=g7597.t1;Parent=g7597;Name=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 5236 5305 . + . ID=g7597.t1.exon1;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 5236 5305 . + 0 ID=cds.g7597.t1;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 5617 5753 . + . ID=g7597.t1.exon2;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 5617 5753 . + 2 ID=cds.g7597.t1;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 6079 6193 . + . ID=g7597.t1.exon3;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 6079 6193 . + 0 ID=cds.g7597.t1;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 6394 6488 . + . ID=g7597.t1.exon4;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 6394 6488 . + 2 ID=cds.g7597.t1;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 6744 6845 . + . ID=g7597.t1.exon5;Parent=g7597.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 6744 6845 . + 0 ID=cds.g7597.t1;Parent=g7597.t1 #PROT g7597.t1 g7597 MSSLSERHRVAVIGAGALGQRIAGECALQGHLVALYDRDPKKVDEARGKIRSDCEELVHKRVITKSELLDIVERVLPASSVSDAVRRADFMFEAVVEDLDVKRSIFQEASAACPADCVLSSNTRTLSITDVAYSAQFPSRIIGIRFLWPVYLIDDVEISVGMATSNETVEVG* # PASA_UPDATE: g7596.t1, single gene model update, valid-1, status:[pasa:asmbl_7613,status:3], valid-1 NODE_479_length_22862_cov_41.6361 . gene 3194 4665 . + . ID=g7596;Name=g7596.t1 NODE_479_length_22862_cov_41.6361 . mRNA 3194 4665 . + . ID=g7596.t1;Parent=g7596;Name=g7596.t1 NODE_479_length_22862_cov_41.6361 . five_prime_UTR 3194 3283 . + . ID=g7596.t1.utr5p1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . exon 3194 3316 . + . ID=g7596.t1.exon1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . CDS 3284 3316 . + 0 ID=cds.g7596.t1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . exon 3437 3519 . + . ID=g7596.t1.exon2;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . CDS 3437 3519 . + 0 ID=cds.g7596.t1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . exon 3761 3839 . + . ID=g7596.t1.exon3;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . CDS 3761 3839 . + 1 ID=cds.g7596.t1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . exon 4000 4119 . + . ID=g7596.t1.exon4;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . CDS 4000 4119 . + 0 ID=cds.g7596.t1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . exon 4412 4665 . + . ID=g7596.t1.exon5;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . CDS 4412 4525 . + 0 ID=cds.g7596.t1;Parent=g7596.t1 NODE_479_length_22862_cov_41.6361 . three_prime_UTR 4526 4665 . + . ID=g7596.t1.utr3p1;Parent=g7596.t1 #PROT g7596.t1 g7596 MSELFAGKRLLRLENGKFVEVDGASLAGSKVAIYFSAHWCPPCRMFTPVLKDLYAHLQEQSKAFEVVFVSSDRSTNDQIEYMKEAHGDWLTLSLEDPFVKELKQKYHVSGIPKLVVIRANGDVVTEDGRSDVMKGPQSYDKW* # ORIGINAL: g7598.t1 original gene structure, not modified by PASA NODE_479_length_22862_cov_41.6361 AUGUSTUS gene 8656 9228 . - . ID=g7598;Name=g7598.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS mRNA 8656 9228 . - . ID=g7598.t1;Parent=g7598;Name=g7598.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 8656 9228 . - . ID=g7598.t1.exon1;Parent=g7598.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 8656 9228 . - 0 ID=cds.g7598.t1;Parent=g7598.t1 #PROT g7598.t1 g7598 MASHRGKAAICFAQSTFTELPTPHGIACTFALNKRGTAWTPVNSYVDMGPGIPRFSEIASVLSVRGTIALALTHSTKDERLGTAVGSELQYRQGCIGSGGNVKVLDSLSLVNNNGRLTGNLPFLAIVAGRPAIACTEAETSTIKYVSAVDATGTHWNAPVHVANVTLRYPDQILDQYVSVAEVCGRPLAV* # PASA_UPDATE: g7600.t1, single gene model update, valid-1, status:[pasa:asmbl_7612,status:12],[pasa:asmbl_7614,status:12], valid-1 NODE_479_length_22862_cov_41.6361 . gene 10251 12625 . + . ID=g7600;Name=g7600.t1 NODE_479_length_22862_cov_41.6361 . mRNA 10251 12625 . + . ID=g7600.t1;Parent=g7600;Name=g7600.t1 NODE_479_length_22862_cov_41.6361 . five_prime_UTR 10251 10305 . + . ID=g7600.t1.utr5p1;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . exon 10251 10662 . + . ID=g7600.t1.exon1;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . CDS 10306 10662 . + 0 ID=cds.g7600.t1;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . exon 10843 11207 . + . ID=g7600.t1.exon2;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . CDS 10843 11207 . + 0 ID=cds.g7600.t1;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . exon 11566 12625 . + . ID=g7600.t1.exon3;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . CDS 11566 12460 . + 1 ID=cds.g7600.t1;Parent=g7600.t1 NODE_479_length_22862_cov_41.6361 . three_prime_UTR 12461 12625 . + . ID=g7600.t1.utr3p1;Parent=g7600.t1 #PROT g7600.t1 g7600 MIMEGEGDASPPFVELHSLGSLLDMWTTLVHADARLDAGIVDTVAVILVLFACINASFIVGKLYDSGRLRRTWIRMGLCIPVLAVLLRAPLALRAHPFRCLFLSGGCGMYAVAIIDSIVFTPGVKSRQYPTIASHFVHFLLGGFLEKTTRSRLSMVLSIAVSITLRLVALSLFLIAYRDVFNGRVHVVVDALLHGVAFSILLPAVSDMTSLGTVLWTGCGVQEMWERPFVATSPKDFWSRRWNMLVRHIFHGTIFHAVRQLSQPNTAHSDDTAAGRPDASLHDINSPNIMRLRSREINRSLSLPSTPTKASTTTSHDDNGIEATLIHSPLTNVEGRPESVDQQQHKKEHTTPRTRGRESHTSHLATYVGGMLVFIASGLVHEYINYVTFGESSGENLAFFVIHGVACAAQVALMRRYKHLLVAPLSSSVALRAVKGGRDHLLRSPLRMHSRTVALDTHRSDTIAWADKNATRSLWQSVVGSRGGNINTSMASFHAVPRWMLVASNVAFFAVTSPLFFLPYIRDGLLMRMLSVLTWRLY* # ORIGINAL: g7601.t1 original gene structure, not modified by PASA NODE_479_length_22862_cov_41.6361 AUGUSTUS gene 14051 15250 . + . ID=g7601;Name=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS mRNA 14051 15250 . + . ID=g7601.t1;Parent=g7601;Name=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 14051 14075 . + . ID=g7601.t1.exon1;Parent=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 14051 14075 . + 0 ID=cds.g7601.t1;Parent=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 14360 14649 . + . ID=g7601.t1.exon2;Parent=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 14360 14649 . + 2 ID=cds.g7601.t1;Parent=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 15062 15250 . + . ID=g7601.t1.exon3;Parent=g7601.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 15062 15250 . + 0 ID=cds.g7601.t1;Parent=g7601.t1 #PROT g7601.t1 g7601 MMPSFCRKAKGYIFGGILSFRCIVSDASGAIVPAPADLSPARTFACTTILGNAEEGGFISCTGRYLIDPVTPGNSDGITLSYKFGTTLDSADYIVARISGQGYIQIVLSTDSAGDAVVETVIPVSPASGGITDLVGTILTGSVTLTSLSCRASVQPFLIAKPGKLTD* # PASA_UPDATE: g7595.t1, single gene model update, valid-1, status:[pasa:asmbl_7615,status:12], valid-1 NODE_479_length_22862_cov_41.6361 . gene 161 2811 . - . ID=g7595;Name=g7595.t1 NODE_479_length_22862_cov_41.6361 . mRNA 161 2811 . - . ID=g7595.t1;Parent=g7595;Name=g7595.t1 NODE_479_length_22862_cov_41.6361 . five_prime_UTR 2692 2811 . - . ID=g7595.t1.utr5p1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 2449 2811 . - . ID=g7595.t1.exon1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 2449 2691 . - 0 ID=cds.g7595.t1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 2044 2244 . - . ID=g7595.t1.exon2;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 2044 2244 . - 0 ID=cds.g7595.t1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 1707 1768 . - . ID=g7595.t1.exon3;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 1707 1768 . - 0 ID=cds.g7595.t1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 1163 1225 . - . ID=g7595.t1.exon4;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 1163 1225 . - 1 ID=cds.g7595.t1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 623 675 . - . ID=g7595.t1.exon5;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 623 675 . - 1 ID=cds.g7595.t1;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . exon 161 291 . - . ID=g7595.t1.exon6;Parent=g7595.t1 NODE_479_length_22862_cov_41.6361 . CDS 161 291 . - 2 ID=cds.g7595.t1;Parent=g7595.t1;3_prime_partial=true #PROT g7595.t1 g7595 MASKRDAATLGGGDGPASAVSPAMDRKKRRTTSECAELADWSPSSWKSKPIKQQPTYKDQKQLRASLETLKSLPPLVSTGEIDDLRSQLAEVAEGKRFLLQGGDCAELFSYCSKKPIENKLKILLQMSLVLTWGARTPIVRVARMAGQYGKPRTKDTEMVDGEEVLSYRGDNVNGFDKHDREHDPNRLVQAYFHSSATLNYVRALLAGGFADLQHPENWNLTKVRCHATRRVYEDMVNSMLDSLHFMKTIK # ORIGINAL: g7599.t1 original gene structure, not modified by PASA NODE_479_length_22862_cov_41.6361 AUGUSTUS gene 9272 9778 . - . ID=g7599;Name=g7599.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS mRNA 9272 9778 . - . ID=g7599.t1;Parent=g7599;Name=g7599.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS exon 9272 9778 . - . ID=g7599.t1.exon1;Parent=g7599.t1 NODE_479_length_22862_cov_41.6361 AUGUSTUS CDS 9272 9778 . - 0 ID=cds.g7599.t1;Parent=g7599.t1 #PROT g7599.t1 g7599 MASFIVTATSLLFFAGMTMAAGGVPRYTRNSTCAREGEAETSAVTSVPIGEGHAQSTANIHGFPAIVYIATNHTLMYIRAQNAEGRAWETPVDILRGQRVEIPFTATVDGERTMLLLRSPVYLAQIGGRPAVTWFNGTTTAGFNTTVPLLYAQSPKCASHTTGRYSTD* # PASA_UPDATE: g3716.t1, single gene model update, valid-1, status:[pasa:asmbl_6046,status:12], valid-1 NODE_3422_length_3505_cov_37.9207 . gene 118 3324 . + . ID=g3716;Name=g3716.t1 NODE_3422_length_3505_cov_37.9207 . mRNA 118 3324 . + . ID=g3716.t1;Parent=g3716;Name=g3716.t1 NODE_3422_length_3505_cov_37.9207 . five_prime_UTR 118 119 . + . ID=g3716.t1.utr5p1;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . exon 118 540 . + . ID=g3716.t1.exon1;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . CDS 120 540 . + 0 ID=cds.g3716.t1;Parent=g3716.t1;5_prime_partial=true NODE_3422_length_3505_cov_37.9207 . exon 1081 1851 . + . ID=g3716.t1.exon2;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . CDS 1081 1851 . + 2 ID=cds.g3716.t1;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . exon 2301 2630 . + . ID=g3716.t1.exon3;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . CDS 2301 2630 . + 2 ID=cds.g3716.t1;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . exon 2963 3324 . + . ID=g3716.t1.exon4;Parent=g3716.t1 NODE_3422_length_3505_cov_37.9207 . CDS 2963 3324 . + 2 ID=cds.g3716.t1;Parent=g3716.t1 #PROT g3716.t1 g3716 PFVVSTSPESGASIPGGISASVAVLFTLDVLPGSGFISLETSSVLFLVPATDGRVSIVGDTVTISLGVLDYNTQYVLTLQGSAFESDVSNGMSQKVVSFSTLPWDGTCHASCATCSGPTENDCNSCNSGYRQINGYSTCTDLTSVPAAVFTIVSVGSLIIRNNAVLDDLNSLNSLVEVYDGPLIFEANPALETIDVSFLYIVGESGDGLTITGNNALTTIGTFGSMQHCNFITITNNPVLTTISGFHGPFSVKSVVIEYNPSLVTFVTFNNLYHVTKGPLTLTHSPLLAYIGGFLYLTTIGASDMSPSALSLEFNDLGIEDVGFLYTLQSTYGDFVFRNMPDLWDLSDLPDNLDIGGELVISNCTSLCDGLFDFANLALHSNSSDIDYDSMRTDCNERPFIVSSDPADEATNVDVSLESIRIEYSIDIDIGDDDLEVLLLVDGSIVATITDFYVAPSDTALIIEIPSDTLFPGTVYRVELPENLVYSLFEFGGLGSSSDAIEFTTAKGITIIRERHVMAYLIASTEFPQNITLRVALSAAPATSVTLQMTLSGSMFALPSMPMTHTFVQSNHTILVDFTAQVTMAPSTGTITISSSAGDPVTSAVIPVVSIYSACCFVVCACLRRCV* # PASA_UPDATE: g5278.t1, single gene model update, valid-1, status:[pasa:asmbl_3896,status:12], valid-1 NODE_2265_length_6994_cov_35.4866 . gene 103 1304 . - . ID=g5278;Name=g5278.t1 NODE_2265_length_6994_cov_35.4866 . mRNA 103 1304 . - . ID=g5278.t1;Parent=g5278;Name=g5278.t1 NODE_2265_length_6994_cov_35.4866 . five_prime_UTR 1251 1304 . - . ID=g5278.t1.utr5p1;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . exon 1016 1304 . - . ID=g5278.t1.exon1;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . CDS 1016 1250 . - 0 ID=cds.g5278.t1;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . exon 642 777 . - . ID=g5278.t1.exon2;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . CDS 642 777 . - 2 ID=cds.g5278.t1;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . exon 103 391 . - . ID=g5278.t1.exon3;Parent=g5278.t1 NODE_2265_length_6994_cov_35.4866 . CDS 103 391 . - 1 ID=cds.g5278.t1;Parent=g5278.t1;3_prime_partial=true #PROT g5278.t1 g5278 MGLYDNVQGMSPAAFVAPSAAAPRPFRFIPAAAEAAPAANAPKGVDLYARFAFAGAVCCAVTHGALTPVDVVKTRIQLEPTIYNKGMIDGFKKVVAKEGAGALLTGVGPTFAGYFLQGALKFGGYEFWKKTAIDNFGMEFASNNRTAVYLASSAIAEFFADVALCPLEATRIRLVSQPTFANGLIGGFTRLAREEGVIRGFYSGFFPILFKQVPYTMAKF # ORIGINAL: g5279.t1 original gene structure, not modified by PASA NODE_2265_length_6994_cov_35.4866 AUGUSTUS gene 2161 3067 . - . ID=g5279;Name=g5279.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS mRNA 2161 3067 . - . ID=g5279.t1;Parent=g5279;Name=g5279.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 2626 3067 . - . ID=g5279.t1.exon1;Parent=g5279.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 2626 3067 . - 0 ID=cds.g5279.t1;Parent=g5279.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 2161 2528 . - . ID=g5279.t1.exon2;Parent=g5279.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 2161 2528 . - 2 ID=cds.g5279.t1;Parent=g5279.t1 #PROT g5279.t1 g5279 MLGTVVVALPIEHTGGDTVARHASGASARFSSVGTDIRMVGVWNAELRVFLGPAYPWCAVPVSCSHEIEPVVSGTRVVLTLTVTARPRAKCDIPDAPTCEVLPMQEMSVFWNGLCDATRREELLRVVTHSTVRLARLGRGTIGLLLDAETGASHAETSIHPVLQVRFDERDECKRTFEGGEESYFNSVFPCTSGDILAAGSENVEGPRRRHMYCDVPFYEDCVHPGCGVVLSHRHEGEIELSEEIITNSLREGIYFRAAIIFRCGLEAC* # ORIGINAL: g5281.t1 original gene structure, not modified by PASA NODE_2265_length_6994_cov_35.4866 AUGUSTUS gene 4745 6979 . - . ID=g5281;Name=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS mRNA 4745 6979 . - . ID=g5281.t1;Parent=g5281;Name=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 5633 6979 . - . ID=g5281.t1.exon1;Parent=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 5633 6979 . - 0 ID=cds.g5281.t1;Parent=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 5278 5383 . - . ID=g5281.t1.exon2;Parent=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 5278 5383 . - 0 ID=cds.g5281.t1;Parent=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 4745 5100 . - . ID=g5281.t1.exon3;Parent=g5281.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 4745 5100 . - 2 ID=cds.g5281.t1;Parent=g5281.t1 #PROT g5281.t1 g5281 MINTHTKNHQHQHRHPHSPIRSHSALVDLAIVCVLDEGGSMSSPVLPYTLLQDMCDCVTLEQVESIFTAVEKRYLVLTDGPLMSLCTTRVSRMNMLILCNDILRRCSKSQNNVFCGRVLIFLAQIFPLNEKSALNLSSVFNRANVTSFQEEEEEDGGTDADASVADAEAHAAVAVARAADERTSAAAGLAVDRSLPARKPIDHAFYKRFWSLQKFFSNPLNVYPANAWADFRASAEVVLGVFRADKVEDGGKDAGDRAFPKFLTAKGLMGLQLSDSQFRRIVLLQFLILFQYLTSAVKSRPKQLVLKPDMEEWVTRTTEVVYAALEDTPPDGIRFAKAVRVMLDREKNWIEWKNNGCESFELCGPDSAAATAAAASKADGDGGASGAAADKLAAQTQQAQPRVLRKRKRELFAGPPPAELLEALKSSGRSHVPDLREFMDEALEQMDPEAQIDDDYKLTRNGLFAWRAVRLLSRTKLACLTVLGDTELTVDAAIAKYGEDIEHPAVKAALAAAKASTEAGAATAAAGDADAQDAPANITEIAGGASTPAVDTDTAMPEEAAEAGDKSTGGERDEDAKMEDAPAKSDDGPAPMEADADEEGAI* # ORIGINAL: g5280.t1 original gene structure, not modified by PASA NODE_2265_length_6994_cov_35.4866 AUGUSTUS gene 3124 3777 . - . ID=g5280;Name=g5280.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS mRNA 3124 3777 . - . ID=g5280.t1;Parent=g5280;Name=g5280.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 3618 3777 . - . ID=g5280.t1.exon1;Parent=g5280.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 3618 3777 . - 0 ID=cds.g5280.t1;Parent=g5280.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS exon 3124 3365 . - . ID=g5280.t1.exon2;Parent=g5280.t1 NODE_2265_length_6994_cov_35.4866 AUGUSTUS CDS 3124 3365 . - 2 ID=cds.g5280.t1;Parent=g5280.t1 #PROT g5280.t1 g5280 MTKASHATWQPASEIAEQSASEDDWQADWYETAHAGDSGGAIELSAKDGYDRWVIPSPNIVPELVALARAAGDGDRNSTAELPLESSVRDYEIPKERFRFPFAWLHKMQERIGSEIEATMLWGQQGVTPPATR* # PASA_UPDATE: g14318.t1, single gene model update, valid-1, status:[pasa:asmbl_965,status:3], valid-1 NODE_1253_length_12723_cov_39.5563 . gene 2926 9136 . + . ID=g14318;Name=g14318.t1 NODE_1253_length_12723_cov_39.5563 . mRNA 2926 9136 . + . ID=g14318.t1;Parent=g14318;Name=g14318.t1 NODE_1253_length_12723_cov_39.5563 . five_prime_UTR 2926 3217 . + . ID=g14318.t1.utr5p1;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . exon 2926 3338 . + . ID=g14318.t1.exon1;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . CDS 3218 3338 . + 0 ID=cds.g14318.t1;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . exon 3751 6027 . + . ID=g14318.t1.exon2;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . CDS 3751 6027 . + 2 ID=cds.g14318.t1;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . exon 6223 9136 . + . ID=g14318.t1.exon3;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . CDS 6223 8414 . + 2 ID=cds.g14318.t1;Parent=g14318.t1 NODE_1253_length_12723_cov_39.5563 . three_prime_UTR 8415 9136 . + . ID=g14318.t1.utr3p1;Parent=g14318.t1 #PROT g14318.t1 g14318 MPATMAVAERRSRRVNLSLVLAIAASMLACNIALANAYVCEEDMSFGLELEYAGQGDMKVMHINQMPASNYERLMRVIASSFGVDEPQTEQIVDFVPHPTMPEKFEPRRVRTIYWTDPKERRWKITAEYVAKGGVYDGYEVVSPPMRSADEVEGVVRNIIASGLVEEGLKSGSHVHINASCLVHADGSARGLVNLFLLYESNEPLIRRIFGTQHLGGSQNLFSQAIYESVPDVITHVAALAPENRTIEGLTSVFNTFREKEIEHLGLAGREIISIANLKKIWKYHSINLVNSLPINSVLPAKKRTVEFRAFDLMDARSHRLAIELCRALAKKAAALAEAGVDIKLDGPLMQAPFGTESSVALLPADSRKVRTMAREFIASLGLDPKMFEHRLRLIVDGGNERVPLDSAPFVVDTATSKKSRRSSGTGAGAAFAALDTEEEIATADTKKVVKDTESKQSTHAAGERRAAKEKKEREATAERLAEEERAEREALEERKKNLLSGLSEEGEQDDDEEDSEDSLLINTVAAQQRRARRAARKAAKEAAKAAAKEIVKEERKNVDAVVVQTTQDSGAARVHVADLVGGPAMELDDGNEENESDDSLSFGAWQQKKRSQMAQAAANDRMRRNAELALQALSSCDPNPCLNGGTCVEEDKDAHCECPPNYTGDYCETSTEQTCADQPCAEHADCADVANGADKYTCTCQEGYDGDGKVQCVEIDGCDAFPCAANATCTQTGPGTRACDCNAAYEGDAYTEGCAPINWCTKPTSPCLPKAHCNYLGPDKFECICPTDFRGDGITKCKFFPPSDTVIFGPTGSFVLDSGHLFDNVANVTLSFRFKTQRSGTLFSGQNSTNSFIFLRLDSLGAQLIVNLGAGAVLASTSGSFLDGRWHTLDVIIRTPFVTIKVDAREFQLIAPAGSTGLNLPESFSIGNFGGCLTVLGIQGKNLTGGLFDPISIADYTWDCPLPDIEFTVGLVPTGSVSIPKNRMNGAKDISVSLEFRTAVRNNDALLFLAGSSTFNTEFRVTVSETGAALKVNMGAVSKFVFVTGEWADGQWHTITATISGGKTIGISVDGGVPKTATVILPNNIKGFRANGVMTIGGSFTGCLRNLYFGTELVSFRETNVAGLGFQYGCPANSDACSLSPCVNLGTCTNNIKNANNYSCACVPGVYGSYCQQSRTNTISFTGDGYLSLSDNPFAIIRLNTITFSFRTKSGAGLIFYTGRKSDDQIYMRTTDKGALVIGYELGSGIGEITANGTYNDDQWHYVVAQRVGKRSTIFVDGSLVVSAEIAGWASALNIDPTSSLNLGGLPPGDTSLAVPRFSGCIREFRVDEKMIDFSKGFTQRNRRFGCASGQVKEVGLTNGFMSFDVFNPRSESTVSFYFRTSTANGTIIYGGQSADSKDADFLAVYMRNGQVYFEFFAGYDNVVTFTKTRYDDGLWHQVTATRVGGNSILYVDSERTRGFTADKTGKVRSVDLTGSLYVGRADNGRASWPLFTGCIREVLLSSVGVGTLQLDFEKAKIRTNVGVCKSS* # PASA_UPDATE: g14319.t1, single gene model update, valid-1, status:[pasa:asmbl_964,status:12], valid-1 NODE_1253_length_12723_cov_39.5563 . gene 11037 12354 . + . ID=g14319;Name=g14319.t1 NODE_1253_length_12723_cov_39.5563 . mRNA 11037 12354 . + . ID=g14319.t1;Parent=g14319;Name=g14319.t1 NODE_1253_length_12723_cov_39.5563 . exon 11037 12354 . + . ID=g14319.t1.exon1;Parent=g14319.t1 NODE_1253_length_12723_cov_39.5563 . CDS 11037 12354 . + 0 ID=cds.g14319.t1;Parent=g14319.t1;3_prime_partial=true #PROT g14319.t1 g14319 MPAMPLSAARTVALYIFALTFVLCAGVCAGELACTNGANRKDMHHYYNFLVRRGADGEHIDSYESEKIGVGLEPGTPDSQSMRLPATLRVAANYSSAPFSFVYGTVPLSDGSTVVGIKRKTQSDDFFYEVIQSRRDGAEGVAEKRILNVPLFRGNDTRIGASISGAYIGSGGSSPGAILGFPQSFVFAIERASTLHPNAALLSVAIYDNTTDSVGAEVTWPSFSLTEPVFFLNGTIARFNVYNQSLVEAATTDEIQAPYSLFTSPYDGSLYFVVRFYGSRAIHVFCYNAPTSDVSTFPSFRWRSLIFPDVVSTVVLTSSILSTLDFDPDTSDVYATVKFPDVSPLPSPLVEGFLSYAAPGYVPNNATTPRAGHIVLRLSRVSGVVNSVSWPPEIDGEVVAIDGAAIGGGEFVLLSSMLNSKGENALLMRRLSFGTAADK # ORIGINAL: g12737.t1 original gene structure, not modified by PASA NODE_2161_length_7464_cov_43.9266 AUGUSTUS gene 1983 2771 . - . ID=g12737;Name=g12737.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS mRNA 1983 2771 . - . ID=g12737.t1;Parent=g12737;Name=g12737.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS exon 1983 2771 . - . ID=g12737.t1.exon1;Parent=g12737.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS CDS 1983 2771 . - 0 ID=cds.g12737.t1;Parent=g12737.t1 #PROT g12737.t1 g12737 MANISDLARRSVLGYAEMLRALGRNGSIVGAVEVRRPDAVGARIPVAADNHWFDAAVVPFDSQPPCDDDDTLPHCLWTVANAVKERIENTEIAMPLMAVSLDDPTLTLSITEYAKDAHVQIEVPPLDVVGDINQRAYGDSSGLFVALASSLSADSRIRAHGIRGENGAFVCVMLTMDLGDDVSVQYVATEDTHRRHGLASRLICAVLRNSRDAGMHTATLQASSDGLSVYKRIGFRQVGLLNAFLRTQTQTAESDHDGKSVS* # PASA_UPDATE: g12736.t1, single gene model update, valid-1, status:[pasa:asmbl_3653,status:12], valid-1 NODE_2161_length_7464_cov_43.9266 . gene 223 1845 . + . ID=g12736;Name=g12736.t1 NODE_2161_length_7464_cov_43.9266 . mRNA 223 1845 . + . ID=g12736.t1;Parent=g12736;Name=g12736.t1 NODE_2161_length_7464_cov_43.9266 . five_prime_UTR 223 261 . + . ID=g12736.t1.utr5p1;Parent=g12736.t1 NODE_2161_length_7464_cov_43.9266 . exon 223 1845 . + . ID=g12736.t1.exon1;Parent=g12736.t1 NODE_2161_length_7464_cov_43.9266 . CDS 262 1791 . + 0 ID=cds.g12736.t1;Parent=g12736.t1 NODE_2161_length_7464_cov_43.9266 . three_prime_UTR 1792 1845 . + . ID=g12736.t1.utr3p1;Parent=g12736.t1 #PROT g12736.t1 g12736 MDGGELLGKSPVSSPLLGIDNKSTLDLGINTHGVTFGDFPSPSSGRDRVTARPLSSLRWSKSSNSLDELVSHDNTPTRLYKSHTEPRNALRSRVGGATVATSSPQHATIAQAARRVLAPSNTTRWYLQLRALVTSEIFKNFATIVLVVLVEIFRAEFSAALRVLVGSLTPALNILLHFFSIPRPLIAMIEVLLSPLMSVVRLLWQPLVAVLHPIMSYLLLPLWNTLVYVGRDVLFRTTWAAVSSVGHKLFLPVLRILHAIVAPIASSLLSPLASIMSTFGGKVLARLPEIVRPQMVLLLLVKTIDVLVQQFTPSWLYSRIHTASHRIFNERYNAVAESYYTAVFVTFILIITLYLSIFLSGFLARVLLYGIFHFFPAAWRNWPHAREYAAFVGDFGILGGGYTALSDRVCSNPTLVDAVCFPQQCTVESGTNAYHTGIAPVSLRALLGIDARHHQLGIAILLLFSVVNSLVYVLRLCGRSIYSSFIQRRRSVSQPPLCESPHSLGENTL* # ORIGINAL: g12738.t1 original gene structure, not modified by PASA NODE_2161_length_7464_cov_43.9266 AUGUSTUS gene 4058 5242 . - . ID=g12738;Name=g12738.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS mRNA 4058 5242 . - . ID=g12738.t1;Parent=g12738;Name=g12738.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS exon 4058 5242 . - . ID=g12738.t1.exon1;Parent=g12738.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS CDS 4058 5242 . - 0 ID=cds.g12738.t1;Parent=g12738.t1 #PROT g12738.t1 g12738 MAGNSSCRSANVNSDYFRSRIPVSSAYIGADAVPDGGVFLPIFARPPLSSAAAIAATRAIVYVHGHGGNANTYFCQGISAASASGASDALVVSPWFGDEQMTGLQWDGGAGVSVFWDTTRWSHGGDNSPSPANFASSFDALDQLVATLADRRRFPNLALVTIVGFSAGAQMLNRWSFFSPLAGLASTPRVRTVVGDASSFLYFDGTRPSANCRPLRDTGSTWQCSDFYTPSSGECSGYNGYKFGLTSLTSGSSTSMYISSWTSTNISRAIAALPTKDVRYFCGLGDSCNCNTDGYAVDAACLRPAGAPNGCTPVAANSTFCCDTFPDSKTSNLVDVKCGAMLQGSNRLQRAQLYMQHLGRVLPNATWTLSVFDGAHSNSALYDNAEFRKAAFQL* # ORIGINAL: g12739.t1 original gene structure, not modified by PASA NODE_2161_length_7464_cov_43.9266 AUGUSTUS gene 5340 5846 . + . ID=g12739;Name=g12739.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS mRNA 5340 5846 . + . ID=g12739.t1;Parent=g12739;Name=g12739.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS exon 5340 5846 . + . ID=g12739.t1.exon1;Parent=g12739.t1 NODE_2161_length_7464_cov_43.9266 AUGUSTUS CDS 5340 5846 . + 0 ID=cds.g12739.t1;Parent=g12739.t1 #PROT g12739.t1 g12739 MVDAVVCGAPNEPVVGVRADDRVEGTDALLVLAAGVAVVVNATAEVDAKGAEAVAERDAWILDDAVAMADADANDAYVVEKRDTCILDAGAVALLAAPLLALTTALDVPSDVTDAECNGVGEGEPFVAMIADVDAVPSERIAAVDWLLPPRAAALSPVPVVWSSDACL* # ORIGINAL: g4937.t1 original gene structure, not modified by PASA NODE_3495_length_3335_cov_36.704 AUGUSTUS gene 697 3116 . - . ID=g4937;Name=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS mRNA 697 3116 . - . ID=g4937.t1;Parent=g4937;Name=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 2952 3116 . - . ID=g4937.t1.exon1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 2952 3116 . - 0 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 2498 2645 . - . ID=g4937.t1.exon2;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 2498 2645 . - 0 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 2111 2223 . - . ID=g4937.t1.exon3;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 2111 2223 . - 2 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 1694 1891 . - . ID=g4937.t1.exon4;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 1694 1891 . - 0 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 1296 1377 . - . ID=g4937.t1.exon5;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 1296 1377 . - 0 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 1109 1173 . - . ID=g4937.t1.exon6;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 1109 1173 . - 2 ID=cds.g4937.t1;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS exon 697 996 . - . ID=g4937.t1.exon7;Parent=g4937.t1 NODE_3495_length_3335_cov_36.704 AUGUSTUS CDS 697 996 . - 0 ID=cds.g4937.t1;Parent=g4937.t1 #PROT g4937.t1 g4937 MADINGFLCGPTPMPQMALTAAAPIYRGHLADVDCRWDVISQSVDDRTAEELGERPLKESRFVINKSRYDSIDCYISNGPMMKDAYNDIDLVYDRDIYKTLVDGGIDDRLSRHMAHLFIRDPLVVYRERIDQDDENDSDHFENIQSTNWQTVRFKPPPPNSSIGWRVEFRSMEVQLTDFDNTAFIVFLVLMTRVILSYGLNFYTPISKVDENMRRGQKRNACLAERFHFRKSVAHADPNSNDDATEEMTIDAIMNGKAGFPGLIPMIQSYLNTMDVDVDARCTIAKYLDLVSKRASGELQTTASWIRAFVDSHSDYKHDSIVPESTAHDLLVACGRLGYGELSAPTLLGPNYPRKN* # PASA_UPDATE: g4100.t1, single gene model update, valid-1, status:[pasa:asmbl_9320,status:12], valid-1 NODE_775_length_17854_cov_42.2349 . gene 13229 17589 . + . ID=g4100;Name=g4100.t1 NODE_775_length_17854_cov_42.2349 . mRNA 13229 17589 . + . ID=g4100.t1;Parent=g4100;Name=g4100.t1 NODE_775_length_17854_cov_42.2349 . five_prime_UTR 13229 13464 . + . ID=g4100.t1.utr5p1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 13229 13523 . + . ID=g4100.t1.exon1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 13465 13523 . + 0 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 13787 13938 . + . ID=g4100.t1.exon2;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 13787 13938 . + 1 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 14174 14329 . + . ID=g4100.t1.exon3;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 14174 14329 . + 2 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 14599 14714 . + . ID=g4100.t1.exon4;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 14599 14714 . + 2 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 15094 15354 . + . ID=g4100.t1.exon5;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 15094 15354 . + 0 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 15641 15811 . + . ID=g4100.t1.exon6;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 15641 15811 . + 0 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 16069 16262 . + . ID=g4100.t1.exon7;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 16069 16262 . + 0 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 16532 16716 . + . ID=g4100.t1.exon8;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 16532 16716 . + 1 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 16998 17112 . + . ID=g4100.t1.exon9;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 16998 17112 . + 2 ID=cds.g4100.t1;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . exon 17389 17589 . + . ID=g4100.t1.exon10;Parent=g4100.t1 NODE_775_length_17854_cov_42.2349 . CDS 17389 17589 . + 1 ID=cds.g4100.t1;Parent=g4100.t1;3_prime_partial=true #PROT g4100.t1 g4100 MRAVVAWADKVHDRDGVKQCIYDIAFRPDGSQVNVAAGNRVLIYDTADGDLVQSLKGHKEAVYAVAYSHDGKRFASGGADKTVIIWTNKLEGILKYSHNDSVQCLAYNPVSHVLASCTATDFGLWSPDQKSVSKHKVASRVLCCSWTNDGQYIALGMLNGQVSIRTKNGEEKVKLERPNSGPVWSIAWNPNKNEQFDTLAVTDWSQRLAMYKLSGQQIGKDRILGFDPCTVSFFTSGEFMVIGGSDKKASLYTKEGVHLGVIGEHEGWVWTVRSKPNQNYVAIGCHDGTVCIYQLIFSTVHGLYQERYAYRENMTDVVIQHLITEEKARIKCRDLVKKIAVYRDRLAVQLPDRVIIYELYRDDNSTFHYKIKEKISKKIECSLLVVTAHHIILCQEKKLVLMSFSGVKEKEWNLEALIRYIKVVGGPPGREGLLVGLKDGQVLKIFVDNAFPIQLIKQATSVRCLDLSASRNKLAVVDENNTCLVYHLPTRELLFQEPNANSVAWNTQNEDMLCFSGNGMLSIKASNFPLHTQKLQ # ORIGINAL: g4098.t1 original gene structure, not modified by PASA NODE_775_length_17854_cov_42.2349 AUGUSTUS gene 6531 10222 . + . ID=g4098;Name=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS mRNA 6531 10222 . + . ID=g4098.t1;Parent=g4098;Name=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 6531 8736 . + . ID=g4098.t1.exon1;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 6531 8736 . + 0 ID=cds.g4098.t1;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 8915 9076 . + . ID=g4098.t1.exon2;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 8915 9076 . + 2 ID=cds.g4098.t1;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 9436 9533 . + . ID=g4098.t1.exon3;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 9436 9533 . + 2 ID=cds.g4098.t1;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 9956 10222 . + . ID=g4098.t1.exon4;Parent=g4098.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 9956 10222 . + 0 ID=cds.g4098.t1;Parent=g4098.t1 #PROT g4098.t1 g4098 MRIYILFVGVLATSLAICGFASAAPYADRKKNEGDPILARTIRMLFDRISAAQQLEDEPYVGGGERGFPPKQWAKNKGLFPSDVHVNFHGDPVSGIFRKLFSIPDNNAYVTAVVTDMLLEARELVDDADEDAPFVEDQLRMATSAILEHRDRNYKSGDPIFSFWKQQKVEKDPGDAFDLVDKKKGKKSKAQYAAYPENLAEPLRAGVRLADMARAFANATHTLDHLEEQLKQLELPSVYLRGLRIPADADDTATALALTGRLACHHKDYPQAAKEWIKKIGGAENVAKTLSAFAYRPFSKDEEENTIDPRTYFWLRKFIDAEAEKRKKVGTYDSDESDDSWDGVDKKKKKDKGREALAVVATWLQQTSDAKENFHRGYTMPFTVNNIDLTVAVTSLYGLAGAVVAEEYGVFGEGALVDNIDDGEWDETSDTDTADELEKIATHIIDEAEEIGDEIGDFLRGVLQEVLHKNSGDSDDNEDNEDGFDVHKRVRLDSNKRKHHSNNNNNNVHSGADNENDDNDDNGDAVQVGDKHKHKLLGKKKKPGKAAKWFDKDLRGVFDGTARVVQWAIESDQLNSRPDLALPFFPSKFAFYFFAGRLAHMLGGDARVADVVESYDVLEDAQGGLLHAMRKYGTAQILDKCQGIVPKPKCAGACGGGDGGDECPPEDELDQLAKLDSRFAKCAYFEEFLGNADTFGKIKWAKHEDRLFSTAMAANALMDTWTETKTRKMKDDSDLVFGGVNKKKDKGKKDQGDQHRVNRKWLADTPKEVVDAVEISLLFVAHAISRATHATSIYNARSNAFFSVSARSADHLPHYYPATDRSFVNGTKVTCDFDPGYSDEIFLGVSGHVDPDEYAKMLDSECFGRKVPMEYGDPNEAVFPYWSSHTFTDAAAALALSKWAALERSAKDSD* # PASA_UPDATE: g4099.t1, single gene model update, valid-1, status:[pasa:asmbl_9319,status:3], valid-1 NODE_775_length_17854_cov_42.2349 . gene 10995 12789 . - . ID=g4099;Name=g4099.t1 NODE_775_length_17854_cov_42.2349 . mRNA 10995 12789 . - . ID=g4099.t1;Parent=g4099;Name=g4099.t1 NODE_775_length_17854_cov_42.2349 . five_prime_UTR 12562 12789 . - . ID=g4099.t1.utr5p1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . exon 12523 12789 . - . ID=g4099.t1.exon1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . CDS 12523 12561 . - 0 ID=cds.g4099.t1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . exon 11899 12145 . - . ID=g4099.t1.exon2;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . CDS 11899 12145 . - 0 ID=cds.g4099.t1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . exon 11380 11520 . - . ID=g4099.t1.exon3;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . CDS 11380 11520 . - 2 ID=cds.g4099.t1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . exon 10995 11100 . - . ID=g4099.t1.exon4;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . CDS 11063 11100 . - 2 ID=cds.g4099.t1;Parent=g4099.t1 NODE_775_length_17854_cov_42.2349 . three_prime_UTR 10995 11062 . - . ID=g4099.t1.utr3p1;Parent=g4099.t1 #PROT g4099.t1 g4099 MDSVGGLPRRIIKETQRLMAEPVGGISATPNENNARYFSIKINGPGDSPFEGGVFKLELFLPEEYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKHNEENAIATARQWTKTYAVDN* # ORIGINAL: g4097.t1 original gene structure, not modified by PASA NODE_775_length_17854_cov_42.2349 AUGUSTUS gene 3581 5718 . + . ID=g4097;Name=g4097.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS mRNA 3581 5718 . + . ID=g4097.t1;Parent=g4097;Name=g4097.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 3581 3583 . + . ID=g4097.t1.exon1;Parent=g4097.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 3581 3583 . + 0 ID=cds.g4097.t1;Parent=g4097.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 3898 5718 . + . ID=g4097.t1.exon2;Parent=g4097.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 3898 5718 . + 0 ID=cds.g4097.t1;Parent=g4097.t1 #PROT g4097.t1 g4097 MASKANTPQSPEPESEWTWNKAFPYIANPQSNSENSGHVDDGLSASLRDLLATTLGNGTAKRSDRGRRTMSAALCVAAVAMDRPDHISGWAYDAIMRLLNPSDARMCDQARAVLLSAAWTSHIATHPAVTQSNVICMAFACRVLHVATYLLRQFSATIGNNDVDSEVGVGVSEFATLASDAGCGQDATTPRDAAFANLVSIPTQVAATITRQTIPELERCFMYTMGAFSRGAHGLASRVRACMQTVTCIDPAGSNGRIGLSMCRVLESVVTCQCHSNREVKRLRAAVLEPPYKWGTAILNTDTLCIIGMSLAQDANGAELAPMYVASSEQMRGRMCSIGLLRRLMQGVPNIPLPEWFAAIGIHLQSLGERAREAIEQHGGMLVQRIMSALAVPIAADIPEIQPFRIEMLAILSRKTRIFPGVAAAALHINSSTIPLNADGTVPVDLPLMNYIEVINPSEWDQHMSSLLNQVCECVRIFCQFQSGADALLSAGLLPIAGRVSRACGTVNVPWALVQAMQSAYAHAPMRFVAEYTGRPLASDTLARSFSVPREEHLVNMRLMLEAIAVLAHAVADTQLSERIYEAIALLAAVGAHEFAWPIDRTMRHRG* # ORIGINAL: g4096.t1 original gene structure, not modified by PASA NODE_775_length_17854_cov_42.2349 AUGUSTUS gene 316 3119 . + . ID=g4096;Name=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS mRNA 316 3119 . + . ID=g4096.t1;Parent=g4096;Name=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 316 1295 . + . ID=g4096.t1.exon1;Parent=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 316 1295 . + 0 ID=cds.g4096.t1;Parent=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 1609 2065 . + . ID=g4096.t1.exon2;Parent=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 1609 2065 . + 1 ID=cds.g4096.t1;Parent=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS exon 2337 3119 . + . ID=g4096.t1.exon3;Parent=g4096.t1 NODE_775_length_17854_cov_42.2349 AUGUSTUS CDS 2337 3119 . + 0 ID=cds.g4096.t1;Parent=g4096.t1 #PROT g4096.t1 g4096 MAISNCWTPPPTPTTGAKWTPDDVEKYTCVTSVIDTQGNPLPRCGVGIAMVPYVCKDASGLIVNDAVCAVTGAKPGISAQRCDTKIACYKWVNGNPSDYYCFPPCGFAVKTVLPECRDVSNRRVINDVCTRLVGPAPSSISQACPNQPACSTMFAWSQLPSPLYTSCVDPALDHPNANGMCVDAGQMFRPYVCYDMYRSKPANYYWCEALSVRPIARTERCSVGTACYRWTTRSTTACSVLCGKGVTGTFAFCEQTMNPGRDVGESFCAGQAKPAAPQTDCDAGACTTGMVASNVTYYEWKMVQKVTCDKRCDGGDLGTYTYCADTRFSDWQALDAKCKGPKPQGNVLGCNKFFCHKYISLNSTRCSATCGGGKSGEFTMCVEATNGVRVVDNSKCDDHNLVKPGQKLVDCNQQPCASAALAIDASIAYWEAVSVPCNVVCGTGYEGTKYVCRSPMFPGLEMQEDWCLRVSAKPADVLSLCNTFPCTPGVSKLTSPLPQASGGSGSGGSSAGAIAGGVICAVAIVAIGVLCFIYRDGLKEKWSQVRDVISSKSSSSRGLSKSGTSRSGSKSHLEIYSLSQSTVNIHTNEVASAKTDEKGSAEMFATLRRNTLSAHTATSSPPPPVPSGKITQTHTASFDYEPQGADEIALQVGDGVAVTKKHEDGWCSGRNLRTMKAGLFPSNYLVEAKPPASAPSSPAPYKKGLPTVPGGGSSPASAARPAPYAKPQPQPKPTVHAKP* # ORIGINAL: g8605.t1 original gene structure, not modified by PASA NODE_974_length_15214_cov_22.4368 AUGUSTUS gene 13981 14970 . - . ID=g8605;Name=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS mRNA 13981 14970 . - . ID=g8605.t1;Parent=g8605;Name=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 14919 14970 . - . ID=g8605.t1.exon1;Parent=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 14919 14970 . - 0 ID=cds.g8605.t1;Parent=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 14483 14598 . - . ID=g8605.t1.exon2;Parent=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 14483 14598 . - 2 ID=cds.g8605.t1;Parent=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 13981 14148 . - . ID=g8605.t1.exon3;Parent=g8605.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 13981 14148 . - 0 ID=cds.g8605.t1;Parent=g8605.t1 #PROT g8605.t1 g8605 MHTDKLDDGRVVLAGRSVTHKSCPKQTGYVRGEIILVAWIAEALTPSTCMLTTILEVDLKGNVPSDFVRRLAITHGSRIDKVRRFLDNSQTLDEQEVEEATEQMLNSTLIC* # ORIGINAL: g8604.t1 original gene structure, not modified by PASA NODE_974_length_15214_cov_22.4368 AUGUSTUS gene 2652 13128 . + . ID=g8604;Name=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS mRNA 2652 13128 . + . ID=g8604.t1;Parent=g8604;Name=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 2652 9830 . + . ID=g8604.t1.exon1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 2652 9830 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 9979 10074 . + . ID=g8604.t1.exon2;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 9979 10074 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 10492 10770 . + . ID=g8604.t1.exon3;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 10492 10770 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 11093 11152 . + . ID=g8604.t1.exon4;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 11093 11152 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 11316 11376 . + . ID=g8604.t1.exon5;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 11316 11376 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 11585 11653 . + . ID=g8604.t1.exon6;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 11585 11653 . + 2 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 11859 11908 . + . ID=g8604.t1.exon7;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 11859 11908 . + 2 ID=cds.g8604.t1;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS exon 12343 13128 . + . ID=g8604.t1.exon8;Parent=g8604.t1 NODE_974_length_15214_cov_22.4368 AUGUSTUS CDS 12343 13128 . + 0 ID=cds.g8604.t1;Parent=g8604.t1 #PROT g8604.t1 g8604 MAFEGGPRLVQCVAIFFLWLCTTTYAEHIATTQSDQAAADAHPALTVYKGGDHDGLPSLQKDALIHTGSLPASFGIEKRTSAGRTPAESSSQPAALSFNDELRTAEDSMLQGDKVVTMMLDADSTYVWAFNSTEEVSQMPSFTIASGVVFSIRRRSPPSASEIATEFTMVTCINGGDANLRAVSILPRFVVHPGGTFEIGGVAFVDCDGVLVDVGDGGDLSVSECNFSVSNCRVPEPMFNIAGVATFTQSVFTCGTDGSTDHERRIEDEEQLPIMRAVESWLEVPLDALGRRGVDAQDGQIGAALIGARGVALVRVNSCQIEGWALLGADGEADAVVVASSLTVCSGECFRIASDATVSVTNNTRILAVEVADIREAGRLTITESEVASVSMRNSNESDGIQPSCEAFRTLHHARLAIYRSTLSLSGCRGLVSRDSSNVLIVGTLIDAVNTSIVWMLEDSTALDLRVASVIAHSNVNVVGIHRDESKAALFETHMSAPYVLFVSGSAHVAAVRLYVDSWVDPDAVEDDRNVVVLKETASGVFSACRFEGTNLSPQAPLCGRHAIGLRDDATLDIAHSSFVNVPGTLYARERSIARLSAVSISANTVMPTPSGKTDWLQHASVKVCKGGAFLLDDSANLFLGDSVLTALPLVSEGGGVGAFAGASRALITNTTVDVAGGDIGPIDGFDRDTPTVGGGAFSLSGAASVHIAFCRFDNLFTVAFYSTIVKPFLNHSGAILEYLSSGGFAKLCDFSFLNVSDTIISSSRSYNGGLVHADGNSVAVVARVSVGATVAFVDGGVFYVTGEARLIVTDVAIANTFVSLRGGFVYADRWANVVIEGVRLGDMEAYWGALVYLTNSAHSSLSGIVVRSALCKTYQVSGAGNIDDDPRNVRKNALDKATKATFRGCLVFGSSNAYLDLIDVGVADNVTTQFSGAVFGLEGNMTVYTQNMTLASVSAGRSGGVAQLLGTSALNFNGLFVRNASAAINGGIIFATENSTVNAYDVIVEWVFSGQGGGCVRAAGAAHVTLSLWRTEFAATNGPGAVALVSDSSIVFMNVIAVESASAATGALFAVSDFGVAVSMNMTVNSGIGLGNGGCVVVSGSRSATEGSAGVVIMDSAFQSCTSGGSGGLLYTRGNSIILFRRVTVAASRALGGDGGCFAAYDKAILQIENSDFNSTVALNNGGFSSVGGDTSTVMTELRVTSSSCDGHGGVISASVRASLHIILCTFIDAKGKMTGGFISSTDAATIHVLQSSVVRAWSDVGVPGLFVRGKSSVALQSVRLSHLQRPFWPGEGWLSAASGSVFLDDVSCDGCTKDSLLSFDYSLEDSPSLVFENLTDVPSVGTDEERLEMLLSTLRLDRPLRLQFNGIGGVFLGITIDTHLPFALSNVQLDGAILHVRGTGVIDQSIFDGSSLTIGEFGHAVLLHVYVTDTSVIIDGHVQFIATEFHNSRLSISNLGVGHFHRCSFNSLQHTDFDVVPYVTLSRLSFATFVASTIGDRTTRGNGGFARLSGASVLQIKNGNVGYLISTGDGGFISAEIEPSDAMGASLISVADTSFSLLGANGQGGFISLRGSSQATVTNCTFFSVAAGSVGGMAYLAESASLSMMRCTFLRATAFMASGLVGGGFLAVLDSASVDLRSVRVFHASALSSGGFATIASRASDDQLRLPSLTAEDLSIAIVSADQRGGAIECNQCTVSITNGVFGHGYASEAGGFIHISGGGNSLVKFKNCSFDDFSSGVQGGLVSMADKSSVLLEDCHVSNVKSVVYGGAVVMDAGTVVVNNCTFAHTISMSGGGGSFLVRSGELQVSDSVFIDSVATLTGGGFLLLETGGTALLQNVTVDGGRCILAGGGVLRMFGRSSLTAHGLIIRNASAVGCGGALLLDGVADAAFEGLSVNGSTAKFFDGGAICILGKGKVLLSNSDITNSTAGSSGGAISASGNAIAILRGVTVNNAEARDGDGGAVYIAIDALVDISNSTIDGARCSRRGGAIFAASTSSLLTRTLVVRHARAQNGGLLYLADAATATMSNTVGVDLSAADNGGCLYAASGGLELHGGTFIQCRASALPSSYGRGGFLFTDTGVSSLQQLTHLNVIGASSLSAPVVFSSNALAHSQSTGIMFDSLGAISATFEAGNTSFASPVANFSVFMTTSNATVTSFPDHASGAALPEFSIEALDYYGNLAFAPPSRPLAIRLGIVNNANSSTGANSVNSGSSGCNLSGDLRRTFPLSSRVDYAGIRLTATSVPTVCTLGFTPDNFLYDAASPLFQSTVLSVRVSACDVGYERVANASAPGLYYCSLIAVGGNAAASSGGSSSTVVVAVVVPVIVVCAAVCAAAMFAIRRNRKRWNAKQMENFAQHVQTSMPGILSVELPEGSVTLCEQLGEGAFGVVHRAEVLMNGRLRMAAAKSLKSNSGVEQRIEFISEAEIMVSLRHENIVSLVGVVTKTEPMLIVLEFCSYGALHSFLRKTDRGRNVATGSSAGGGRLASKHNAGLNLMFVRLAHDIAQGMAYLASQNIVHKDLAARNVLVAVNAFNELTSKIADFGLSRDVGEKGFYQKKKARAIPVRWTAIESLLHSTYDEKSDVWSFGVVLWEIWSFAAVPYPGVSNTEVLSFIRTEGRRLSCPDGCPRQVYKTMFSCWAHNPAERPSFTQLVTVLSDTDSLLHTKDVDVKGINSGSAMTTMTSSHEGTSSPSGRAVTKSTDAGVVMSAGARSTARRSASVAYLDVGDDVCVGASGREGTGANVAEDGKSRPLSVSNPYKFADDLCEAPAATNSYDNPGQRTVGANLSGLGAEKEELSISPPRSTARLSRLTEVESPPACPSDAKDTTYLQLMPMHSRNEENKGQPAWVHPHFNEDESTA* # ORIGINAL: g13162.t1 original gene structure, not modified by PASA NODE_3004_length_4548_cov_62.721 AUGUSTUS gene 133 472 . + . ID=g13162;Name=g13162.t1 NODE_3004_length_4548_cov_62.721 AUGUSTUS mRNA 133 472 . + . ID=g13162.t1;Parent=g13162;Name=g13162.t1 NODE_3004_length_4548_cov_62.721 AUGUSTUS exon 133 203 . + . ID=g13162.t1.exon1;Parent=g13162.t1 NODE_3004_length_4548_cov_62.721 AUGUSTUS CDS 133 203 . + 1 ID=cds.g13162.t1;Parent=g13162.t1 NODE_3004_length_4548_cov_62.721 AUGUSTUS exon 375 472 . + . ID=g13162.t1.exon2;Parent=g13162.t1 NODE_3004_length_4548_cov_62.721 AUGUSTUS CDS 375 472 . + 2 ID=cds.g13162.t1;Parent=g13162.t1 #PROT g13162.t1 g13162 YIVIKRLTDGAGASGKVEGSIREAVTNGEEEVPSTMIVMRAIAVARRGGKGRRRA* # PASA_UPDATE: g12040.t1, single gene model update, valid-1, status:[pasa:asmbl_7701,status:3], valid-1 NODE_48_length_49919_cov_42.8037 . gene 30835 34599 . - . ID=g12040;Name=g12040.t1 NODE_48_length_49919_cov_42.8037 . mRNA 30835 34599 . - . ID=g12040.t1;Parent=g12040;Name=g12040.t1 NODE_48_length_49919_cov_42.8037 . five_prime_UTR 34395 34599 . - . ID=g12040.t1.utr5p1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 34230 34599 . - . ID=g12040.t1.exon1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 34230 34394 . - 0 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 33594 33816 . - . ID=g12040.t1.exon2;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 33594 33816 . - 0 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 33162 33344 . - . ID=g12040.t1.exon3;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 33162 33344 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 32821 32955 . - . ID=g12040.t1.exon4;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 32821 32955 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 32464 32571 . - . ID=g12040.t1.exon5;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 32464 32571 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 31955 32035 . - . ID=g12040.t1.exon6;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 31955 32035 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 31293 31652 . - . ID=g12040.t1.exon7;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 31293 31652 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . exon 30835 31094 . - . ID=g12040.t1.exon8;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . CDS 30916 31094 . - 2 ID=cds.g12040.t1;Parent=g12040.t1 NODE_48_length_49919_cov_42.8037 . three_prime_UTR 30835 30915 . - . ID=g12040.t1.utr3p1;Parent=g12040.t1 #PROT g12040.t1 g12040 MAGSGTGSGTHVEWMNQSFAGDAWGGERLGAALSAAAIEEVRQVFRMLRPSLKMKVLLSFLSVRKSDAPLFKDAMEDILQQAARDDDEWVRMVHEVIRSFARTGEIGLSDGAEVQSQGLRSALEEASKALDAGAPSFAPLEWVYLADDVVAAIGGTPSQKAASSLESIHFRTKEGHVPAAAALRARITSQKPVSVKDRRASVAGGSHAPGDVKKPPSRVAGTMPSLRPDQERSPIVRRPSVQTPGSALQKSKAKVIDIAEMPNIDAHGKRRDTAADRKRPAESTADHSAKRQRTSALPDAPTPDVHSAPAEPGDDGDAPSHAAADVEGKDDHVPPPVVPSIEAPPSSGDHHDATTTATTVTSMADAAVAGTVVETEEKEDERLARQALEAALALVTDSQLLSVSDKEEALAFLRSVLKERNEKGGVKTLAVKEETTVDESGVSIFDQTCIQLDYSTGTWRRFKRRKKAKTAAADQTQ* # ORIGINAL: g12042.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 41214 41618 . + . ID=g12042;Name=g12042.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 41214 41618 . + . ID=g12042.t1;Parent=g12042;Name=g12042.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 41214 41618 . + . ID=g12042.t1.exon1;Parent=g12042.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 41214 41618 . + 0 ID=cds.g12042.t1;Parent=g12042.t1 #PROT g12042.t1 g12042 MPAQKGMVETHGVFISTVALLLCVFVLLKLDGRVHWDWATVFSPLWIYDGVVALVLLANLPHMRQTASVRKESRLTIAMSSVVLATVLPFEVLLVLKLQGSISIPYTVVFIPLWMFFVAASARIGWIVHSRQRS* # ORIGINAL: g12034.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 126 5082 . - . ID=g12034;Name=g12034.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 126 5082 . - . ID=g12034.t1;Parent=g12034;Name=g12034.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 4065 5082 . - . ID=g12034.t1.exon1;Parent=g12034.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 4065 5082 . - 0 ID=cds.g12034.t1;Parent=g12034.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 126 3922 . - . ID=g12034.t1.exon2;Parent=g12034.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 126 3922 . - 2 ID=cds.g12034.t1;Parent=g12034.t1 #PROT g12034.t1 g12034 MDGRRARAGRSSSSFRDDKTKPRQSSRKQQQQQQQQQEEQQQLLEKEAESTPQRAHRTRRSINQTTPTSAARELEIAAEAVKGDGKPTSRRPTKRSAAAAEVDEPQRESKRRSTRASAAEPVVASAPAAPESVVVNAPSHQPISGACRARRPHSEIGSGCSSPLAGAVRQEATNKRVESDSPARGGVKSSPRRGPLLRGEAQREASEAQGEAEPKAKRRKVKKASPVKRMADNNSASKAVKLDDSDEDEFEDAETGEDADVQLQDDDDEDVEEGEEDEEDEDDAEEDEEEEEDGDEDGEDAAARLAAELSQDGASAALQGLLRRLGAGIEMHVAGGHGLGGGSGRLRNLLQGIKSASEDEKLIAVSELCELLSMSTEDSLPGFPVEQFVPPLIDLLRMEHNPDLMLLGARALTHLIEALPPSVVSIVNHNGVGLLCEKLLSIEYIDLAEQSLTALEKISKEHGGAILRAGGLSAVLSFLDFFSTSLQRCAVTIASNACRGAPSDSFHFVRDSIPILTNLLTYQDKKVVERACLCFARLVDSFADSASKVETITSFGMVDNMLKLVSSQPLPVSGGTFTMIIRTLSAASRAHPALVASLHDAHVGGTIRQILLGPDRTPGDVTYASGSHTAEQLYEILSLAAEMLPKLPEEGILAGPQSLQQQRVGRHRRNLTGDSVGAPADAPSSTPDGDPRAALIVRKPDVVAAFAEELLPVFLEVYQSTVSSTVRRKCLATILKIVFFASSEHLTELLRTVAISSFVSGLLTARDHHVVVCAVQMADILIRKMPSIFHTYFRREGVMFEMAKLAQNAKGLALPASVPQAKQIAQGNFATPPSSRRLSETFKKSGKKGKASAEDEESAKSEGGKGAAPAVAAVAQRVSAEVANPTPTKSPGGASEETQRWIGDQATTFCAAFFADLGSDSAPAHPAAETLRTLKALAANINAEIDADVAKTETLAAVRAIIIDAEQNVSSFELHNSGMLSALLRYVTIPDKAQYDQEARLMRLRCFVHVFINGPTPTGVTPVEATLTTPALVQLLAKTHGSLNNLEQFPVMLSELNTRSGAATGGPRGALGGLRALTQPLKLKLARESGEEGVKEYSGSVVLIEPLATVQAIEDFLWPRVRNQDSEGPTSREEALRRRMQRVRRDSAGREFEEEDGEESDDASEASERPGSQSDSQQSRNSNGARPGRDKRLRLYMEGNELLSTMTIFQAVQRFGAEVEENNDGDDEQRNTRPFSGTYTIKFRLAQPGGPSSAGALVAAAQGGVPVSDDSAVVGGNGAGGLAGSPLQNTLPLDVHLSGSLPCSIPSTDAVYPILRMLRALYGLNKFWMVLVDNAAAHENAGTAVSSSEFVNNRITAKTMRQLQDPFALCSNSVPEWVGELVRSCPFLFPFECRQLYFYMTSFGISRALMRLQERPNEMAPGDEQGAGGNNAQDSFRVGRISRIKVRISRQRILESAVKVMESYAGSKSILEVEYFDEVGTGLGPTLEFYALASKAFRRADLNLWRGSSAAQQQATDGHRGTTRVELDAEGKEVAYVHTPGGLFPAPIAKGDEEGAKTRLSLFGILGRFVAKALLDCRIVDLPLSLPFCKWALGHESELQARDIK # PASA_UPDATE: g12043.t1, single gene model update, valid-1, status:[pasa:asmbl_7702,status:3], valid-1 # PASA_UPDATE: g12043.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7703,status:12],[pasa:asmbl_7708,status:12], valid-1 NODE_48_length_49919_cov_42.8037 . gene 41862 46358 . - . ID=g12043;Name=g12043.t1 NODE_48_length_49919_cov_42.8037 . mRNA 41862 46358 . - . ID=g12043.t1;Parent=g12043;Name=g12043.t1 NODE_48_length_49919_cov_42.8037 . five_prime_UTR 46129 46358 . - . ID=g12043.t1.utr5p1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 46086 46358 . - . ID=g12043.t1.exon1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 46086 46128 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 45799 45944 . - . ID=g12043.t1.exon2;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 45799 45944 . - 2 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 45184 45630 . - . ID=g12043.t1.exon3;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 45184 45630 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 44253 44738 . - . ID=g12043.t1.exon4;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 44253 44738 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 43849 44004 . - . ID=g12043.t1.exon5;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 43849 44004 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 43534 43599 . - . ID=g12043.t1.exon6;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 43534 43599 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 43194 43361 . - . ID=g12043.t1.exon7;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 43194 43361 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 42731 42823 . - . ID=g12043.t1.exon8;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 42731 42823 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . exon 41862 42338 . - . ID=g12043.t1.exon9;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . CDS 42153 42338 . - 0 ID=cds.g12043.t1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . three_prime_UTR 41862 42152 . - . ID=g12043.t1.utr3p1;Parent=g12043.t1 NODE_48_length_49919_cov_42.8037 . mRNA 41862 46005 . - . ID=g12043.t1.1.5b6be70c;Parent=g12043;Name=g12043.t1 NODE_48_length_49919_cov_42.8037 . five_prime_UTR 45859 46005 . - . ID=g12043.t1.1.5b6be70c.utr5p1;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 45799 46005 . - . ID=g12043.t1.1.5b6be70c.exon1;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 45799 45858 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 45184 45630 . - . ID=g12043.t1.1.5b6be70c.exon2;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 45184 45630 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 44253 44738 . - . ID=g12043.t1.1.5b6be70c.exon3;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 44253 44738 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 43849 44004 . - . ID=g12043.t1.1.5b6be70c.exon4;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 43849 44004 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 43534 43599 . - . ID=g12043.t1.1.5b6be70c.exon5;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 43534 43599 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 43194 43361 . - . ID=g12043.t1.1.5b6be70c.exon6;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 43194 43361 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 42731 42823 . - . ID=g12043.t1.1.5b6be70c.exon7;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 42731 42823 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . exon 41862 42338 . - . ID=g12043.t1.1.5b6be70c.exon8;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . CDS 42153 42338 . - 0 ID=cds.g12043.t1.1.5b6be70c;Parent=g12043.t1.1.5b6be70c NODE_48_length_49919_cov_42.8037 . three_prime_UTR 41862 42152 . - . ID=g12043.t1.1.5b6be70c.utr3p1;Parent=g12043.t1.1.5b6be70c #PROT g12043.t1 g12043 MAASGIGGARRAVSILLRASGRRFLSLSTKPTALPGLSTTFEHMHIGASIYTGGVRGFHASGVCASDQGGNGKDKFVGVCPRCVDSRLTPFRGLTGFYRCEKCTYMFEVTQLRDQPQSPTMEQAGAEKASGSGPAAAAAAAGEGGVPKEEPLWMKDMPNPRMIYEHLDQYVVGQETAKKVLAVAVYNHYKRVRANLARKEAMASDNAARGFKQSPLELDKAPLGNGRGRQFSERLSASHQYTQTSAATSMPPSSGGVQSPAGGQKDYGMHLDKSNILMLGPTGSGKTLLARTLSEYLDVPMAMSDCTVLTQAGYVGEDIESVLYKLLQEADFNVERAQRGIVFLDEVDKIARPSESLGAIRDVSGEGVQQGLLKMLEGSVVNVPEKGGRKLPRSDYVPIDTTNILFVASGAFNNIDRIVGNRVSKSSIGFAANVLDAKDKEHMTNKAEIEPEDLIKFGLIPEFIGRFPVIVKLTGLDEPSLVRVLSEPKNSIVRQYQSMFTADKVQLVFTDDALRRIARTALEKKTGARGLRTIIERLLLEPMYSVPGSDVTAVVVDEEVAGGKKEAMLMRGRVDKDGKPIDDGAGEQQQESQVAA* #PROT g12043.t1.1.5b6be70c g12043 MHIGASIYTGGVRGFHASGVCASDQGGNGKDKFVGVCPRCVDSRLTPFRGLTGFYRCEKCTYMFEVTQLRDQPQSPTMEQAGAEKASGSGPAAAAAAAGEGGVPKEEPLWMKDMPNPRMIYEHLDQYVVGQETAKKVLAVAVYNHYKRVRANLARKEAMASDNAARGFKQSPLELDKAPLGNGRGRQFSERLSASHQYTQTSAATSMPPSSGGVQSPAGGQKDYGMHLDKSNILMLGPTGSGKTLLARTLSEYLDVPMAMSDCTVLTQAGYVGEDIESVLYKLLQEADFNVERAQRGIVFLDEVDKIARPSESLGAIRDVSGEGVQQGLLKMLEGSVVNVPEKGGRKLPRSDYVPIDTTNILFVASGAFNNIDRIVGNRVSKSSIGFAANVLDAKDKEHMTNKAEIEPEDLIKFGLIPEFIGRFPVIVKLTGLDEPSLVRVLSEPKNSIVRQYQSMFTADKVQLVFTDDALRRIARTALEKKTGARGLRTIIERLLLEPMYSVPGSDVTAVVVDEEVAGGKKEAMLMRGRVDKDGKPIDDGAGEQQQESQVAA* # ORIGINAL: g12041.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 35247 40399 . - . ID=g12041;Name=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 35247 40399 . - . ID=g12041.t1;Parent=g12041;Name=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 40171 40399 . - . ID=g12041.t1.exon1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 40171 40399 . - 0 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 39909 40027 . - . ID=g12041.t1.exon2;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 39909 40027 . - 2 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 39586 39716 . - . ID=g12041.t1.exon3;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 39586 39716 . - 0 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 39263 39425 . - . ID=g12041.t1.exon4;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 39263 39425 . - 1 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 38835 38978 . - . ID=g12041.t1.exon5;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 38835 38978 . - 0 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 38556 38647 . - . ID=g12041.t1.exon6;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 38556 38647 . - 0 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 38248 38320 . - . ID=g12041.t1.exon7;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 38248 38320 . - 1 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 37919 38000 . - . ID=g12041.t1.exon8;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 37919 38000 . - 0 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 37485 37668 . - . ID=g12041.t1.exon9;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 37485 37668 . - 2 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 36978 37157 . - . ID=g12041.t1.exon10;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 36978 37157 . - 1 ID=cds.g12041.t1;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 35247 36498 . - . ID=g12041.t1.exon11;Parent=g12041.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 35247 36498 . - 1 ID=cds.g12041.t1;Parent=g12041.t1 #PROT g12041.t1 g12041 MSSSERYEQVMARVRSGSLARGTSASSTRSSATSVSSVSSSAASAQEEYKPRKKVKKIKKRKGTVTICTTDCKYDVVRRVSKRLGWKDVADDEDWFLYWTDTSVALERVMEMKGYQKINHFPGMSEITRKDNLARNLNRLYKQFPEDFDFFPKTWVLPADWSDFQNHIRAAKKTRTYIMKPESGCQGRGISLSRNPQRDIKPSEHMIVQEYLDKPFLMDGFKFDLRIYVLVTSCDPLRIFLYEDGLARFATEAYTEPSSKNVDNMFVHLTNYAINKNNENFVRSDDYEKGSKRSLESVKKWFAANGYDVTTLWDNVADIIIKTLTAAVPILSHNYRTCFPNHNTGSGCFEILGFDILIDRKMKPWVLEVNHSPSFTCDSKLDREIKEDVIGNALRLLNIATIDRKRCAEFERKRVQDRLLKGRRSPAEEKKEREEERKSWEKEMLEHELANIGNYTRIYPTETSSKYDKFLSGASSVFNETAASKARLELLRVQREDRELKKTKPLARRMSTGSAKDAADRRTLLSRRAASMTLKDSGSGDPEASDPENARTNNGGEAQGEENSAKIRNDALQATARRLSKYGRAAAEGAASAVKISDLTSALEQRLSKLSLSKIPSRTELSQSGRRRGSAAPDAAMETLLGEGCGVPYSEEEEAVRMRMLAEREGLVRAVGLRERLHDLLSGKEPAAMSSHALPQTRLFGRHTTTAAVLASAANALGRSVAHAEQEKLHNQIAQQVMAPAHVMVSSGKPPLPVPIAFRPTPSNPSGRSWLVTETDLDGGAANGRRLNRGLSLQLVNGDHAGAAGVAQAHAPVSAGPVYNYPAFPSHNNGGFSGGSSASHSASRSNKTVSLSILSERAPVGRRSEPLRPKPAMLSSTARNLS* # ORIGINAL: g12035.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 5940 7571 . - . ID=g12035;Name=g12035.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 5940 7571 . - . ID=g12035.t1;Parent=g12035;Name=g12035.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 5940 7571 . - . ID=g12035.t1.exon1;Parent=g12035.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 5940 7571 . - 0 ID=cds.g12035.t1;Parent=g12035.t1 #PROT g12035.t1 g12035 MPPSRTSKRPRVSSSTLSDGVPASVAGIDSLADTDIEDLLKLRACRDARGSHGGNYHSFDDDEISSIRQRLLSWYDVNQRVLPWRRAGAHCPTQCANTRADGGDETNRAYRVWVSEIMLQQTQVSKVIAYYEKWIARWPTPQSLASATLEEVNEVWSGLGYYSRARRLHESAKRIMEELGGVFPSTSDSLIKELSGVGRYTAGAVASIAFGECVPVVDGNVVRVLSRLRCIGSDPKSSVVVDKMWKLAEGLVDLSRPGDFNQAVMELGATVCTPQTPKCNECPLRRHCRALAESDKVVVKTGKPPKKSARKEAVEECTLCHEHFQSVATSGTPKPLDVLAYPSKTPKKKSKEQTFAVGVAVAPSVAPGFPPVHLVVKRPEKGLLGGLWEFPNKELAIEDDDDVDASLTALAALKSTAAEGADIDVASLRHAGTVCHVFSHVKHTYEVYTCGLTHAFSTTTSLKREILDEQMTVDGDEKAANGERVLWITGEQISGAALSTAMRKVYECAIAAGGTLARQPRSKKIVPPPKGQKSIGAFFKKSS* # ORIGINAL: g12039.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 25740 30346 . + . ID=g12039;Name=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 25740 30346 . + . ID=g12039.t1;Parent=g12039;Name=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 25740 27528 . + . ID=g12039.t1.exon1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 25740 27528 . + 0 ID=cds.g12039.t1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 27679 27890 . + . ID=g12039.t1.exon2;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 27679 27890 . + 2 ID=cds.g12039.t1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 28064 28831 . + . ID=g12039.t1.exon3;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 28064 28831 . + 0 ID=cds.g12039.t1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 28935 29261 . + . ID=g12039.t1.exon4;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 28935 29261 . + 0 ID=cds.g12039.t1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 29400 29565 . + . ID=g12039.t1.exon5;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 29400 29565 . + 0 ID=cds.g12039.t1;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 29703 30346 . + . ID=g12039.t1.exon6;Parent=g12039.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 29703 30346 . + 2 ID=cds.g12039.t1;Parent=g12039.t1 #PROT g12039.t1 g12039 MAALGPVQLASGPDAGLFWDQRFAAWRSMAVPGPVPLLSHGVDVSLPPAAFPSGTEVDARMRGSDGWHNAIVLSSYRLPDSSVQYFVEYDSHAIFPRHAMLMHWDIQSRADRSLTAVEVKPGDMVLANYNFSRNDLPGNWYDAVVTRVDYRRDGTARMWVRIYGPDHQWLPKEVVPFGNHVYEVPKGGQHASWHLVASPRKAASYGYEHSFDPLSSGHLADAKSHRKSAHRDSGARSHLHAASADVPRTAIDTLDSPLRNSNGDELPPTPSETRSAQRPRTVAQLARQRQQLELERAEHDKDDHGFVIIGEPVVRRPTAPRRKPSLAVKKLDLKSDEESRTKTVWRPTAPRRKPSVAVKILDLESDEETRAKRDTKARVPLSTLSPNRRERSPLDLSEVPRPGVDTDAPISLDDAHVSQKHVTPLPDASITHSTSPVSVAVASYRPLPFRPQSRAERIQNAVRNRDLAARLLDAERQCIEADLQKEQQAKEAALEALMDERTREKEEKRAERLKAVEARRARRREEKMLELKKRMLARGEIDEFDVLPEGTAPLPDDDCLAVVDCSGGLDVGGVLMVAEFLSTFGNLLQIRRSISKGCIESALLAGEEGYGFLVDIQLPLIKEIYGDETEELAALDRKSKVVFSAATFPSVVHAIIRDLGDQSHAHLVGETKTVEYIDLNPSDKLAICELLCNLTLSCSSVADAITEAAEQVSDARRIFRQEEAEERKKYVDAKTAQILEEMISLDHGDDDHSGGETALTVTANKPIVGDAEAAVAKLKGHFRENTREQRALMGAVVLGSDRRARRHMILPSGVVDGVLVQADVGGASMVEPSGDGGDGADGAEVAGRMRLGDERYFVLPTQSQVEAMTGALLAKGDCEGRLKRKYAEVMPEILDQFAQGAKTRRKLTLSGSYAPVVKQLVDAAIDFDRVAAEVMDKCTPKGDLPASEPVNRKSFEKLRSKFSAKLSKATRVQEVCGSLLAHAQEIATLFTPAWPESGWLLINDKLKGCTSSVVLLELLKGLMTALKTTEGKILRATDKASSDSADDSSSGTDSPTDKRKRRRNYADAHNSAVDARAERAARRQERDEGTEESESTSDSPDEDEFEVEAIIDRRVVRGVEKFLIKWKGYPASENTWEPRENILSDLLIEDFEREARRKASLATSADEAASDSFSTTRASRGKPTAPRRKVVPARNDARTTSPPTDPRVEALRVVRGRADSVTSDDSSEGTTGGHRAVGTRKRAADTTDEESAPRERSVRKKTYIDKDAGVGGERTRATRSAVGAGAGPSVMRPRRNSRRQS* # PASA_UPDATE: g12038.t1, single gene model update, valid-1, status:[pasa:asmbl_7706,status:12], valid-1 NODE_48_length_49919_cov_42.8037 . gene 17989 24694 . - . ID=g12038;Name=g12038.t1 NODE_48_length_49919_cov_42.8037 . mRNA 17989 24694 . - . ID=g12038.t1;Parent=g12038;Name=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 24605 24694 . - . ID=g12038.t1.exon1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 24605 24694 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 24431 24523 . - . ID=g12038.t1.exon2;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 24431 24523 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 22567 24270 . - . ID=g12038.t1.exon3;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 22567 24270 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 21441 22388 . - . ID=g12038.t1.exon4;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 21441 22388 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 21070 21276 . - . ID=g12038.t1.exon5;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 21070 21276 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 20343 20911 . - . ID=g12038.t1.exon6;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 20343 20911 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 20022 20205 . - . ID=g12038.t1.exon7;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 20022 20205 . - 1 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 18873 19790 . - . ID=g12038.t1.exon8;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 18873 19790 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . exon 17989 18590 . - . ID=g12038.t1.exon9;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . CDS 18084 18590 . - 0 ID=cds.g12038.t1;Parent=g12038.t1 NODE_48_length_49919_cov_42.8037 . three_prime_UTR 17989 18083 . - . ID=g12038.t1.utr3p1;Parent=g12038.t1 #PROT g12038.t1 g12038 MEEVDVKAELKAARESIRTKEFKDVLRRCKLILKADKDNYNAYVFLGVAAEGLEQPAQAEQAYRKATQLAPKQATAWQGLQKLYEKGLDPQHKVALPEVYGGLAACYEALGIAEKDKYLDAMVKRADAFHMAGSTRDALVSLSALLSPDKGLSSADMTRMRCKMIDLAEIDVSKGQSGDSDVRRMYEESLDVVDLAGAEAGLVESATLVKHRKSLLRLLLTRLKATVDASSAATVVYRIRTLCASLQSADPADPFAFEVSCALGTNPGLSGSAPSREEKRFAVRFAFMYPQNAHALLSLGHVLVRVGIASDRTVRLLSDGVKRLPNLALGWLYYAECCLARKDSDGAGNAARRGISLLTSPAAAAPTTTASQSSGGVVVLSSAKTQTVQVSTNADMNPTGNNTLSKLELLLAATFVMEGNRQSLSQARAFYERILSRHPGEPAAVVGLARTCIARGENDAAAELLSQIPSDSSAAIDAGAMSGYLALVRGDADAAIAALCTAVSARAINAEYRLWLARAYWSKGGEFRSNKAYCQAEAMAAGRLDPFLADAFALLGDLFRDEFADAERARRCYWKAVRVDPRCDSAGIALSELLGAMGDEDGLLELYKAMTAKKGRSIWAWLRLGLHYQSKGRHADAIEHFQGALRIDTTNARLWEALADSYAASGRLIAATKAFARANELDPSDFCTTRIAMLNTTLGMTSPAIQSLEELLQRRPDYIPGEKALADALLAHARQRLSLGMVPRAVSYLERCVRVVSAALAREPLMRTLWKIAGDACMTLALCPDESLAASSSSLASSCSLNPPAFPFASPDSGVGRHRPPLPPSIGTSVVDLTSGVGVACCAARMYAECVALQRGAAEHWHDLACAVSTVADLLGGAIGIADDQHDDPAVNRARVYAIECCKTGLRLTPEDHRLWLLYGVLECAHDNPAVAQHALVRSINLCANNAPAWANLGLLYWAEGLTEQAHAAFSRAQSVDPTHSLAWVGQALVAERIGHEDEAADLFRHSSELDPTMTRANFGYASHAYAKLRDAPADPRDPLARFRGLLQSATAMARVLDRTPRDALAHNYAGLLLEAAGRHSEARARFATCRSLSAGNRALLGAACINEGRVLNRLNRPSEALAVLADVHEAGYKVAVAKGRAHFLLGMYAESGQSYEAALAAAVVEDVSASDRAMRIVDATIGVAQSAYYAGDYMRARQLLIDCAPHSSEHPRGLYVLVAMAVLQGDQTIAMAALGELLQRNNDSLDDLGRIDAVLLFASAFQTQGHSREAGRFIARLVHMFPHSWRLWHRLSTHLLYGQQSTVSGPWYGDCGKLGLRTALSSLATFQSHPHADTDAEDAAWSEDAVDPHALVSAAFLAAGMPPHASGAAQRALSAAEVAAHSDPSNVGSWVALSAAALATSTLERAGAQFSVAMHPEQQGGGGWEERGGAFAGLLAAQASTAAAHAKDASQRKLAELSPGSASVAGVENALPVHAAAFNAYAPALARVALWARLAALDVHTSGGNASLLGQIDQSIGEVIGSNPLHASKLYVQLGRALLSYPDGSQERATAPAAFKNALRLDVHNADAWQELAQAYALNDRPKSAEMCLRMCVETAPSDAKAARTLPMMRIARLALYTKNKELAIEAVSVAMQLDRTNSAVAALAGIVHSVLGDARSARRSLSSAVDESDRAVVDARKMDRIVGRSGAGAGGDISRELSLYFQAKTAAGGKDKDTDAAKSDPVARMSTRTPLYALARK* # ORIGINAL: g12037.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 11284 17853 . + . ID=g12037;Name=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 11284 17853 . + . ID=g12037.t1;Parent=g12037;Name=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 11284 12141 . + . ID=g12037.t1.exon1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 11284 12141 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 12459 12591 . + . ID=g12037.t1.exon2;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 12459 12591 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 12932 13089 . + . ID=g12037.t1.exon3;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 12932 13089 . + 2 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 13298 13366 . + . ID=g12037.t1.exon4;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 13298 13366 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 13567 14799 . + . ID=g12037.t1.exon5;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 13567 14799 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 14985 15137 . + . ID=g12037.t1.exon6;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 14985 15137 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 15360 15658 . + . ID=g12037.t1.exon7;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 15360 15658 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 15971 16163 . + . ID=g12037.t1.exon8;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 15971 16163 . + 1 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 16346 17474 . + . ID=g12037.t1.exon9;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 16346 17474 . + 0 ID=cds.g12037.t1;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 17774 17853 . + . ID=g12037.t1.exon10;Parent=g12037.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 17774 17853 . + 2 ID=cds.g12037.t1;Parent=g12037.t1 #PROT g12037.t1 g12037 MPPPARPPPPSASPQSTPPSRPPPPSAASTLQATSSQSLSSTTTATKSNLVNAAPSRPPPPVTSSGGSQLSLSLSASGSTTSSSSSLSTGAPPARPPPPSAAPVVVETKLRSKSNADSNDRPDDLGVKAGQVPPRPKSTVGTERLDDSRNGKLANSFSSSGVGGGQALPSRPPPPSAVTTAGGSVTAADGAKTTRQSPSEKRLKRTSIVDDAHGKKEAAAAKKTKKEAYQAKRLAQKVPMEQTPLPQPLLVADALTAEEKKEVYLACAMSVYNQMDVVEDEHRIQMQRMRTAVNCVRRLRVRLEGAKDLTAKHGDTSNPYISVDFQGMQHATPIAVKSLDPSFDEQFEFVVERACGSVSLNVWSAHDATGGKRDSEVAPYNKKDKFLGMASLSLADVIGGGGTLRKMLVLEKRSERSHVTGTVSVTVTYASSLAGKNASPAALRNFRRLADMLLARDHSLAPDGSLRDALHERMLKLCARVHGLSRSEDAALRLERAVSRSLPPMDADCAQPLAALSARMLEGAERASKSPSSSSCICGKGNGAPELAGYVSAALDGIVAYAEGWLKLYRDKFSAESIGALMSLSSTLTMVQNTLSLRQILRSSQPRESEVARTLGGWLTDVKRLGYHVMWEQTELHAPKVSSGRRSSTEEEDVAAAVGARLGEEENTGDGDGGDVDELWRECVRLTKISSKLLEDVKDDADIYAATFARAKVDIVAISLEVVCPMHAEDLRELLGNAEPDNVSAHVFELYRRVRRLYRLCHDLISRNGGAGKGGLVSNPYERMCDWFSPFMYVWLRTAARKTDEWSRNAMAQDNLEFIADGVLHSSSAVDIFGGLSSGLEFIKDLDWPDKQESSVFYAKYFDIVNAQVKNYAVWLREAIARASSEMDVTDTPEAQSAEGEGEGQSQPSQQSRGAAISTAMCAALNNVAQCYEQTCLLRDAVLTETDVLAADDSRRVLISDLVMEAFRSLSSTMETLVDAFSSKLAPAIKDGLLYVGGQGEKKQLRAIAVLKKKVRGGDKVKGRKEWDSKRKESLLKRLRWKRGSDPKAHSDIDDLLEPLTNYLDTNLEMLAQYLYEDVFRHVLLALWERGVLKSVQDMIMHPGDADSADAKRTMAQKQFVLVRKAVDKMRWFLHADGDGLPLEDLDSKEFKSVCLMLRLGSMDAPDIIAEYYRTQADKTIEDISAPKGVNIPLLISQVELVSNSGRISVRATLDSAMDLPPMDATGTCSAYVTAKVVPGDGKEVRTAVKVRSSNPVFNEALELPMGRSASEVVLVLTVWHSQKEKDEQGPSSGGVFLGEAVVALTGMSTRNVTVHTTPLMPSNTHDSRVILALLAMRREDKVAQEFVRQHKGAVLGRKEGGGKLLDLSFSGDSKVHSVNGHLFRATHFNHPVFCRVCDKMLVGLGKQGYRCDRCLGVCHKKCHTNTDACSGKA* # PASA_UPDATE: g12045.t1, single gene model update, valid-1, status:[pasa:asmbl_7709,status:12], valid-1 NODE_48_length_49919_cov_42.8037 . gene 48207 48908 . - . ID=g12045;Name=g12045.t1 NODE_48_length_49919_cov_42.8037 . mRNA 48207 48908 . - . ID=g12045.t1;Parent=g12045;Name=g12045.t1 NODE_48_length_49919_cov_42.8037 . five_prime_UTR 48854 48908 . - . ID=g12045.t1.utr5p1;Parent=g12045.t1 NODE_48_length_49919_cov_42.8037 . exon 48207 48908 . - . ID=g12045.t1.exon1;Parent=g12045.t1 NODE_48_length_49919_cov_42.8037 . CDS 48614 48853 . - 0 ID=cds.g12045.t1;Parent=g12045.t1 NODE_48_length_49919_cov_42.8037 . three_prime_UTR 48207 48613 . - . ID=g12045.t1.utr3p1;Parent=g12045.t1 #PROT g12045.t1 g12045 MSFGDAILKALNAPPDIPVIPPLRPLKGKERQMFKRDVASGAYQNRINKIKAERSAIQERIAKDIMKSAGEKEAAVQQQ* # ORIGINAL: g12044.t1 original gene structure, not modified by PASA NODE_48_length_49919_cov_42.8037 AUGUSTUS gene 47691 48125 . + . ID=g12044;Name=g12044.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS mRNA 47691 48125 . + . ID=g12044.t1;Parent=g12044;Name=g12044.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 47691 47923 . + . ID=g12044.t1.exon1;Parent=g12044.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 47691 47923 . + 0 ID=cds.g12044.t1;Parent=g12044.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS exon 48032 48125 . + . ID=g12044.t1.exon2;Parent=g12044.t1 NODE_48_length_49919_cov_42.8037 AUGUSTUS CDS 48032 48125 . + 1 ID=cds.g12044.t1;Parent=g12044.t1 #PROT g12044.t1 g12044 MSSAAKPKEHQQKGLRSNSEPLQTRDFDDARAAKHTDAHVDHASPVESSRPRTVSFGSSQPSIIGQNTGALPAEMSHPENFTAGRAFINDKTAKDRDWEYTQSAGYRA* # PASA_UPDATE: g12036.t1, single gene model update, valid-1, status:[pasa:asmbl_7700,status:12],[pasa:asmbl_7705,status:12], valid-1 NODE_48_length_49919_cov_42.8037 . gene 8252 10830 . + . ID=g12036;Name=g12036.t1 NODE_48_length_49919_cov_42.8037 . mRNA 8252 10830 . + . ID=g12036.t1;Parent=g12036;Name=g12036.t1 NODE_48_length_49919_cov_42.8037 . five_prime_UTR 8252 8311 . + . ID=g12036.t1.utr5p1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . exon 8252 8489 . + . ID=g12036.t1.exon1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . CDS 8312 8489 . + 0 ID=cds.g12036.t1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . exon 8706 8791 . + . ID=g12036.t1.exon2;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . CDS 8706 8791 . + 2 ID=cds.g12036.t1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . exon 8969 9330 . + . ID=g12036.t1.exon3;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . CDS 8969 9330 . + 0 ID=cds.g12036.t1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . exon 9581 10830 . + . ID=g12036.t1.exon4;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . CDS 9581 10604 . + 1 ID=cds.g12036.t1;Parent=g12036.t1 NODE_48_length_49919_cov_42.8037 . three_prime_UTR 10605 10830 . + . ID=g12036.t1.utr3p1;Parent=g12036.t1 #PROT g12036.t1 g12036 MESAIANMVRFCPHMQRMGGSLLRTAPAMRSLASQCPIMSQAISFARGVHSDAVPAVNTVSENTSPSLETADASEQHSSTFMQQHLQKVVSTADAAAPCPIFTAHLPPVPESHDSTSAVFANPNATPSELPADAYNYEGVFSHKVAEKRSDNSYRVFKNINRLAGHFPQAETYKVGPQMAVAPPKKVTVWCSNDYLGMSRNPHVVAAMKEALDKYGAGSGGTRNIAGNGLYHELLEQKLAHLHQKQSALLFSSCFVANDATITTVAKSLPGCILFSDEMNHASMIQGVINSRAAKKIFRHNDPDHLEQLLREAPRDAPKIVLFESVYSMSGSISPMERICDIAHKYGALTFLDEVHAVGMYGPHGAGVAEQRNILSKVDIVTGTLAKAYGVVGGYIAGSSAMIDMVRSYAPGFIFTTSLPPMIAAGALASVSYLEKSNVEREGQQRNAALMKRKLRDAGFPLVDSPSHIVPVLVGDAARCRQVSDDLMSDHGIYVQSINYPTVPRGTERLRITPTPLHTPAMMDTFVNALTQTWKKNSLSFYQAIPAAA* # ORIGINAL: g5744.t1 original gene structure, not modified by PASA NODE_3580_length_3163_cov_38.9514 AUGUSTUS gene 327 2945 . - . ID=g5744;Name=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS mRNA 327 2945 . - . ID=g5744.t1;Parent=g5744;Name=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 2737 2945 . - . ID=g5744.t1.exon1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 2737 2945 . - 2 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 2381 2476 . - . ID=g5744.t1.exon2;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 2381 2476 . - 0 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 2028 2095 . - . ID=g5744.t1.exon3;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 2028 2095 . - 0 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 1571 1720 . - . ID=g5744.t1.exon4;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 1571 1720 . - 1 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 1002 1110 . - . ID=g5744.t1.exon5;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 1002 1110 . - 1 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 689 768 . - . ID=g5744.t1.exon6;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 689 768 . - 0 ID=cds.g5744.t1;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS exon 327 465 . - . ID=g5744.t1.exon7;Parent=g5744.t1 NODE_3580_length_3163_cov_38.9514 AUGUSTUS CDS 327 465 . - 1 ID=cds.g5744.t1;Parent=g5744.t1 #PROT g5744.t1 g5744 PKVVLATFEGLSTGFAQELFLQWASSQKNLIVFTTRPAPDTIGRSMYEVAVAEQIEKVTLVQARVLNFEKRERVALVGAELAEFNAARDEEKRLKALDESEDAMETDFPDESEDGAISAAPNRRESVGMLRHDVFVGSQADEGSGAKARGGAATGGGFFKQTRSFPMYPFHEERVRWDEYGEVIRAEDFLSSGGDVGATLAAADAATQKEREAAKMDVDMSDDSKAAIEEAAPEEAPEQIPTKCIRVPVSVIVNAALKYVDFEGRADGTSIRNIVEKIGARQT # ORIGINAL: g9656.t1 original gene structure, not modified by PASA NODE_1699_length_9654_cov_43.5925 AUGUSTUS gene 5819 6943 . + . ID=g9656;Name=g9656.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS mRNA 5819 6943 . + . ID=g9656.t1;Parent=g9656;Name=g9656.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 5819 6943 . + . ID=g9656.t1.exon1;Parent=g9656.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 5819 6943 . + 0 ID=cds.g9656.t1;Parent=g9656.t1 #PROT g9656.t1 g9656 MEAARGGVLFIDEAYALGNRGYGEEAMTKLLSMLTEKDYVDGKTIVILAGYSQQMHEMLQRNPGLKSRFTENLDFPDWSPQKCAEFVLTQLTEHAQPTPYALGDGSEEALLQIQHALKEGFAVLQNPLREGWANIRDALRMTKDVETQREIRACGDDGGNTYVRASAATGESPRITLTDVRAAVADFIKSRPIRADGFKRVGDDDAGNLSSDDAELNAQGETAETQVRVQTARSTVQHANTKDKEDANDDNDEQSDVVQEWFGVSIKRVVRPMNDVLVALGLDNEGAIRALVRDGCMRQEVVNALVRSGMDRVDAETAVDQYGSAWDSANASQEAETGGGLNRVPIVECQICRRTANFWAPCFVAPMIIGYEAV* # ORIGINAL: g9655.t1 original gene structure, not modified by PASA NODE_1699_length_9654_cov_43.5925 AUGUSTUS gene 667 5037 . + . ID=g9655;Name=g9655.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS mRNA 667 5037 . + . ID=g9655.t1;Parent=g9655;Name=g9655.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 667 5037 . + . ID=g9655.t1.exon1;Parent=g9655.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 667 5037 . + 0 ID=cds.g9655.t1;Parent=g9655.t1 #PROT g9655.t1 g9655 MAKPVLPVATGHVIRCTSPPTCAAFSHDNTMLASGHADGTISVWKTGASATGTGAPTLKRILNCSPESDDENTDDEADREIKSVLFSLDNARLYTGNKNGVVSIFDVQTGKLTHTMTGHIGKVRAIAMDPNGRTLASAGKDGTLRIWSTRTMKTLHILKDGIASQMSPLTEESYPASKHGGFKRVAYASSGRRVAASSSGSVVWIWNADKSNPPLYRVSVSLDAPLIDRIIALALSPEGDAIAVAGRFLGDKMAIGGSRQAKATALHVRTSEAVGLRTVLVPTNMSRHLAVSFTRSGEAVRVSTADFMSYTHFIDTGGFVKEEHLVPVDTEMNVESAAESPDGTWVTWLGDDAVVVSRRGMSAESHGGTPQKRITRSTASAAAATNNDTGGYNAEVRSRRETRQSERRDREQKAFSAQIIPAALADLADSSSPASCTFDWTVVANLQSRESRILLAHVDPQAENTLLHLAVQAVRLDVVILLLSACPMMVGVPNREQQTPLHHAASLLSEEGVHILQAISERATEKILAMRSDRGRTALHEAAQSGNVDSVRSLCEICDTSIIDAEDEDGQSPLLLAVQWRTAPYDIVEAILKAGANPHAKNRKGKSAVDIAHTKGGDFARKIELLIRGAVLARCDSRLSLADWNRWVAEGLADRSFTAGNSTSDCYALAQEHDSPTVVSALDRVQNETFDVATDGVFEAMATSSTLGRLYCALSFLSSASTCDIEDVQEALREYETQGPSPLHPLFILAHARLALRANNPDRAATLFWSFRSRFKELAADWMCAADLAVLEAHMQAAENDGQNEDGKGRAKPKKGKGSKASREEDCQLTKEVAPTAIDPLLSRWSVVKTGLTAEQQEPMEELLAMEGLRKVKECALRIYTDVLADAKLEKMGYGNSVCSRTLNFTFAGNPGTGKTTVARLFARLLSEAGARAAHNFVSMTATDALRIGSKKFSGQLSALTGATKGTGPPSSSIRVGAKVEVLHNSDRKWYPATVASEQRGNLSVSWSSYNQPTTYTVSYPDGTSEASIELNHIRTVEQNGGIGGVLFLDEAYDLDPKTNTEGKAILAEIMSAAEDHRETLTIILAGYKDDIENRLFAFNVGLASRFETIPFEDFTEEELCRIWKNLCEDSNWQCAEDVCMVATRRIARSIGRRGFGNARAVRRLHELAVSEAKLRYFESTDPNAEPVILMEDVIGFEPTRDANKELDTALTELDRMTGLAEVKRIVHGLVRLSLNNYHREKRGERTDDVTLCRLFVGNPGTGKTTVAKLYGRILRALRLLTSGETLYKVASDFTGDAVGQAQQKTRAILSMAEGKVLVIDEAYALDDNFYGRQALDTIVECISGRPGEDIAVVLAGYEPQISKMMREQNPGLSRRFNSSQPVRFDDYSDGELLMILTESCRAMEVRMPIGVKKYAVSKLAKLRTLPNFGNAGLVQTMLADAKARMSDRIQRMRDV* # ORIGINAL: g9657.t1 original gene structure, not modified by PASA NODE_1699_length_9654_cov_43.5925 AUGUSTUS gene 8153 9629 . + . ID=g9657;Name=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS mRNA 8153 9629 . + . ID=g9657.t1;Parent=g9657;Name=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 8153 8209 . + . ID=g9657.t1.exon1;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 8153 8209 . + 0 ID=cds.g9657.t1;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 8346 8495 . + . ID=g9657.t1.exon2;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 8346 8495 . + 0 ID=cds.g9657.t1;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 8645 8781 . + . ID=g9657.t1.exon3;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 8645 8781 . + 0 ID=cds.g9657.t1;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 9062 9163 . + . ID=g9657.t1.exon4;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 9062 9163 . + 1 ID=cds.g9657.t1;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS exon 9485 9629 . + . ID=g9657.t1.exon5;Parent=g9657.t1 NODE_1699_length_9654_cov_43.5925 AUGUSTUS CDS 9485 9629 . + 1 ID=cds.g9657.t1;Parent=g9657.t1 #PROT g9657.t1 g9657 MATNGRLTPLQHRPEITGEVQRRKTPSSSRPSTAGSGKVRLEPLSRDNLANWSSKWAAPVAAKLDELRQGHIRVFLSSPFRGMEEERDLLTKTYLPQLRHMCLEAGLVLLTVDLRWGLTQATSQTAETLVTCLRQLDQSDIFIGFYGQRYGWHQDPAAPKDELLARNFAVAKSEFPWISDYRLDIARVGKTTPVAR* # PASA_UPDATE: g4207.t1, single gene model update, valid-1, status:[pasa:asmbl_2991,status:3], valid-1 NODE_1911_length_8596_cov_40.589 . gene 49 4845 . + . ID=g4207;Name=g4207.t1 NODE_1911_length_8596_cov_40.589 . mRNA 49 4845 . + . ID=g4207.t1;Parent=g4207;Name=g4207.t1 NODE_1911_length_8596_cov_40.589 . five_prime_UTR 49 231 . + . ID=g4207.t1.utr5p1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 49 494 . + . ID=g4207.t1.exon1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 232 494 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 664 939 . + . ID=g4207.t1.exon2;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 664 939 . + 1 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 1357 1459 . + . ID=g4207.t1.exon3;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 1357 1459 . + 1 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 1764 1932 . + . ID=g4207.t1.exon4;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 1764 1932 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 2170 2264 . + . ID=g4207.t1.exon5;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 2170 2264 . + 2 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 2484 2628 . + . ID=g4207.t1.exon6;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 2484 2628 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 2804 3009 . + . ID=g4207.t1.exon7;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 2804 3009 . + 2 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 3177 3338 . + . ID=g4207.t1.exon8;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 3177 3338 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 3572 3754 . + . ID=g4207.t1.exon9;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 3572 3754 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 3931 4061 . + . ID=g4207.t1.exon10;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 3931 4061 . + 0 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . exon 4193 4845 . + . ID=g4207.t1.exon11;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . CDS 4193 4364 . + 1 ID=cds.g4207.t1;Parent=g4207.t1 NODE_1911_length_8596_cov_40.589 . three_prime_UTR 4365 4845 . + . ID=g4207.t1.utr3p1;Parent=g4207.t1 #PROT g4207.t1 g4207 MMNRRTTLGAISASQANVMAGRPSVGASRKSLLPQKAASNAQSASNNGNNGNGANNGSSRLSLAPGRGGAPAQQQARRSVGDRASLSRRASMHDKAVTSIMKDPRPLTDKSFQSACIKNLITFLMSNGYPHPLSQKLLTAPSSKDFARIFQHIYLLIDPKHNFNNVQMEEEIPMLFKKLKYPFQMSKSLLLTVGAMHVWPTVLGALTWLVELVSYYLTVDVSSRGGAGGFEQDCNDNEVFFDYIKRQYALYLSNKDDELGQLSEEMSNTFETRVGDLKSEIDRLQHQQAELMKEIDDFKNNQSPLEEAEHRMKLLSSDREKFVKMCAQLQEHKAHQERKLNDVQRQDETIEKELATHISERARLQDILDHQEMSAADVERINMEKAKLEESLRSVGAQREAAERDIWEREMSASKKLEQLEASVNAYHKLAERLQLLPSTATNAHGVNYELHLNPHAPRPEQVLSVDLKGVVKPSLIRLKESIHTRIAEAQEQLLVIQERHDQISDASTERADEVGLLENKAKKMEAQYAEEKETLSAEYKERAEDIAALEREVQRLRQAAEKGLHDSVRSLQKLRTEYEELQGKCRHERDEANVLVVKTLELVTAHKTYVHDRLSHLRSFASKMKKEVESTVV* # PASA_UPDATE: g4209.t1, single gene model update, valid-1, status:[pasa:asmbl_2994,status:12], valid-1 NODE_1911_length_8596_cov_40.589 . gene 7234 8563 . - . ID=g4209;Name=g4209.t1 NODE_1911_length_8596_cov_40.589 . mRNA 7234 8563 . - . ID=g4209.t1;Parent=g4209;Name=g4209.t1 NODE_1911_length_8596_cov_40.589 . five_prime_UTR 8556 8563 . - . ID=g4209.t1.utr5p1;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . exon 8498 8563 . - . ID=g4209.t1.exon1;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . CDS 8498 8555 . - 0 ID=cds.g4209.t1;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . exon 8103 8248 . - . ID=g4209.t1.exon2;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . CDS 8103 8248 . - 2 ID=cds.g4209.t1;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . exon 7234 7757 . - . ID=g4209.t1.exon3;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . CDS 7530 7757 . - 0 ID=cds.g4209.t1;Parent=g4209.t1 NODE_1911_length_8596_cov_40.589 . three_prime_UTR 7234 7529 . - . ID=g4209.t1.utr3p1;Parent=g4209.t1 #PROT g4209.t1 g4209 MVPIGDYEIPLSKAEILTTGKDVTVVGWGTQIHVLRKACELAESKMGVSCELIDLRTIAPWDIETVEQSVRKTGRLLVAHEAPITGGFAAEIASTIQDRCFLSLEAPIQRVCGLDTPFPLIFEPFYMPDKFRCFEAIKKMVEY* # PASA_UPDATE: g4208.t1, single gene model update, valid-1, status:[pasa:asmbl_2992,status:3], valid-1 # PASA_UPDATE: g4208.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2993,status:12],[pasa:asmbl_2995,status:12], valid-1 NODE_1911_length_8596_cov_40.589 . gene 5632 7122 . + . ID=g4208;Name=g4208.t1 NODE_1911_length_8596_cov_40.589 . mRNA 5632 7122 . + . ID=g4208.t1;Parent=g4208;Name=g4208.t1 NODE_1911_length_8596_cov_40.589 . five_prime_UTR 5632 5659 . + . ID=g4208.t1.utr5p1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . five_prime_UTR 5752 5771 . + . ID=g4208.t1.utr5p2;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . exon 5632 5659 . + . ID=g4208.t1.exon1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . exon 5752 5825 . + . ID=g4208.t1.exon2;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . CDS 5772 5825 . + 0 ID=cds.g4208.t1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . exon 5979 6182 . + . ID=g4208.t1.exon3;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . CDS 5979 6182 . + 0 ID=cds.g4208.t1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . exon 6388 6447 . + . ID=g4208.t1.exon4;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . CDS 6388 6447 . + 0 ID=cds.g4208.t1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . exon 6673 7122 . + . ID=g4208.t1.exon5;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . CDS 6673 6858 . + 0 ID=cds.g4208.t1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . three_prime_UTR 6859 7122 . + . ID=g4208.t1.utr3p1;Parent=g4208.t1 NODE_1911_length_8596_cov_40.589 . mRNA 5640 7122 . + . ID=g4208.t1.1.5b6be70a;Parent=g4208;Name=g4208.t1 NODE_1911_length_8596_cov_40.589 . five_prime_UTR 5640 5771 . + . ID=g4208.t1.1.5b6be70a.utr5p1;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . exon 5640 5825 . + . ID=g4208.t1.1.5b6be70a.exon1;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . CDS 5772 5825 . + 0 ID=cds.g4208.t1.1.5b6be70a;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . exon 5979 6182 . + . ID=g4208.t1.1.5b6be70a.exon2;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . CDS 5979 6182 . + 0 ID=cds.g4208.t1.1.5b6be70a;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . exon 6388 6447 . + . ID=g4208.t1.1.5b6be70a.exon3;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . CDS 6388 6447 . + 0 ID=cds.g4208.t1.1.5b6be70a;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . exon 6673 7122 . + . ID=g4208.t1.1.5b6be70a.exon4;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . CDS 6673 6858 . + 0 ID=cds.g4208.t1.1.5b6be70a;Parent=g4208.t1.1.5b6be70a NODE_1911_length_8596_cov_40.589 . three_prime_UTR 6859 7122 . + . ID=g4208.t1.1.5b6be70a.utr3p1;Parent=g4208.t1.1.5b6be70a #PROT g4208.t1 g4208 MGRKKIAIKRIEDERNRQVTFTKRKLGLMKKAYELSILCDCEIALIIFNGNNKLFQYASTDMDKILLKYTEYSEPHESRNNADIAAVLAKRSKEGGADSDEEGNDQFVLSPRTEEKYNKINKDFDEMIKANQHQGQHAVPVPFAPPGPYMQQLAIPPHGHPYLPSNQ* #PROT g4208.t1.1.5b6be70a g4208 MGRKKIAIKRIEDERNRQVTFTKRKLGLMKKAYELSILCDCEIALIIFNGNNKLFQYASTDMDKILLKYTEYSEPHESRNNADIAAVLAKRSKEGGADSDEEGNDQFVLSPRTEEKYNKINKDFDEMIKANQHQGQHAVPVPFAPPGPYMQQLAIPPHGHPYLPSNQ* # ORIGINAL: g2977.t1 original gene structure, not modified by PASA NODE_5383_length_882_cov_329.229_potentialcontaminant AUGUSTUS gene 107 676 . - . ID=g2977;Name=g2977.t1 NODE_5383_length_882_cov_329.229_potentialcontaminant AUGUSTUS mRNA 107 676 . - . ID=g2977.t1;Parent=g2977;Name=g2977.t1 NODE_5383_length_882_cov_329.229_potentialcontaminant AUGUSTUS exon 107 676 . - . ID=g2977.t1.exon1;Parent=g2977.t1 NODE_5383_length_882_cov_329.229_potentialcontaminant AUGUSTUS CDS 107 676 . - 0 ID=cds.g2977.t1;Parent=g2977.t1 #PROT g2977.t1 g2977 MNRVSFLLGRVNTVFDRATHAISDHVFLEPLLRNDVAMVMGTPAQAEVLRVTTQGTAVSVAAELVAASHLQVPYYCGVDVTVTTASTARAFMMYHAAYVCFGRDDRFGLDEAAGRVAAKRRAVELPRGIYISKSERLPPPMAHCLTTRPLTPSGVNLIVEMILSGLFLTAATAKETFERAIESNNFVPF* # ORIGINAL: g13216.t1 original gene structure, not modified by PASA NODE_2218_length_7203_cov_38.9261 AUGUSTUS gene 146 3988 . + . ID=g13216;Name=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS mRNA 146 3988 . + . ID=g13216.t1;Parent=g13216;Name=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 146 700 . + . ID=g13216.t1.exon1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 146 700 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 857 1023 . + . ID=g13216.t1.exon2;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 857 1023 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 1116 1908 . + . ID=g13216.t1.exon3;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 1116 1908 . + 1 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 2082 2234 . + . ID=g13216.t1.exon4;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 2082 2234 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 2376 2544 . + . ID=g13216.t1.exon5;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 2376 2544 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 2718 2795 . + . ID=g13216.t1.exon6;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 2718 2795 . + 2 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 2954 3120 . + . ID=g13216.t1.exon7;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 2954 3120 . + 2 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 3211 3405 . + . ID=g13216.t1.exon8;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 3211 3405 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS exon 3779 3988 . + . ID=g13216.t1.exon9;Parent=g13216.t1 NODE_2218_length_7203_cov_38.9261 AUGUSTUS CDS 3779 3988 . + 0 ID=cds.g13216.t1;Parent=g13216.t1 #PROT g13216.t1 g13216 MWLPRLKIMSEYLPVFDNPLTACHNVCGCGFLVFVGTLQRTYATAHPLLRLALALVSHRAWRGRWLVSQSFGPSFERLMTVRQPNAMDSTALLAPDMCDFPLPHDPKDPRLASIVAELSAVVDRDDSVRGDICLAFIRDDQPPAFVPLPASVVPAFTASGSQSVCRLFLVWLRRFLRRNVGMKKTQPPADVSDPWSVLGVSNALMFAVEHDLERALSADAHQDKAVLPVDLSIADIRVAARQFMDPNLDHFDLPRLGGTANFLVREESELPMPASDTRGLQSVPNPPGHLEVNRTSAPSSAAALPEQARAPTIDRIDGIVDHAQRIADAIRELGLPSDSDTASDIDSDEDSDVAAAGHQDIIAFSSLDNVQHSPPSTNSGHSAAPVTDSADSAGSRALESRMLARAARVSELRERVAQRRAEAQQAASALVERQRIMEQLLNDTNMGELAGSIAPMASDFGPGGAYPTRSANLRRTSRPTSSIAFEIVDALLLCHNLVVAPIFMQRQLSDIRTALATGSNEPPIRDELRRNEMACTVSLQRLLGMCLSHDAIRRSERKRQQFRHVSAYTLSVLLRASNLPDTRALSYVPEYYVTSACAMLVTSASSQESLQDAACSAALGLAAEFVGRHLFDKRIINPDIKDFLVRTLVFLFESHSNVFASLPRVVTAVADGILGGVPPRQFVTILNITQKFWQGRGYGSAGPEVESQGVSDTRTVWSAFRDAFADGCAREPGHMHEYMNQLLNHLNTGWSEFGAAMLEFLTDDFHLFWCRHVLEGVCSDASQIILARNDANGEVNVARILQIAIHVVNRAADRRDFATVRGRMWMLI* # PASA_UPDATE: g13217.t1, single gene model update, valid-1, status:[pasa:asmbl_3795,status:12], valid-1 # PASA_UPDATE: g13217.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3794,status:12], valid-1 NODE_2218_length_7203_cov_38.9261 . gene 5349 6037 . - . ID=g13217;Name=g13217.t1 NODE_2218_length_7203_cov_38.9261 . mRNA 5351 6037 . - . ID=g13217.t1;Parent=g13217;Name=g13217.t1 NODE_2218_length_7203_cov_38.9261 . five_prime_UTR 5997 6037 . - . ID=g13217.t1.utr5p1;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . five_prime_UTR 5862 5872 . - . ID=g13217.t1.utr5p2;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . exon 5997 6037 . - . ID=g13217.t1.exon1;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . exon 5750 5872 . - . ID=g13217.t1.exon2;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . CDS 5750 5861 . - 0 ID=cds.g13217.t1;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . exon 5351 5605 . - . ID=g13217.t1.exon3;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . CDS 5499 5605 . - 2 ID=cds.g13217.t1;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . three_prime_UTR 5351 5498 . - . ID=g13217.t1.utr3p1;Parent=g13217.t1 NODE_2218_length_7203_cov_38.9261 . mRNA 5349 6037 . - . ID=g13217.t1.1.5b6be70b;Parent=g13217;Name=g13217.t1 NODE_2218_length_7203_cov_38.9261 . five_prime_UTR 5862 6037 . - . ID=g13217.t1.1.5b6be70b.utr5p1;Parent=g13217.t1.1.5b6be70b NODE_2218_length_7203_cov_38.9261 . exon 5750 6037 . - . ID=g13217.t1.1.5b6be70b.exon1;Parent=g13217.t1.1.5b6be70b NODE_2218_length_7203_cov_38.9261 . CDS 5750 5861 . - 0 ID=cds.g13217.t1.1.5b6be70b;Parent=g13217.t1.1.5b6be70b NODE_2218_length_7203_cov_38.9261 . exon 5349 5605 . - . ID=g13217.t1.1.5b6be70b.exon2;Parent=g13217.t1.1.5b6be70b NODE_2218_length_7203_cov_38.9261 . CDS 5499 5605 . - 2 ID=cds.g13217.t1.1.5b6be70b;Parent=g13217.t1.1.5b6be70b NODE_2218_length_7203_cov_38.9261 . three_prime_UTR 5349 5498 . - . ID=g13217.t1.1.5b6be70b.utr3p1;Parent=g13217.t1.1.5b6be70b #PROT g13217.t1 g13217 MASLGSCCNSLIWFLILFLIWPIGFFCAAFYAFVSPFEACISGCGDLSSTLLKGAQWPKKIAGNMMNGTSLG* #PROT g13217.t1.1.5b6be70b g13217 MASLGSCCNSLIWFLILFLIWPIGFFCAAFYAFVSPFEACISGCGDLSSTLLKGAQWPKKIAGNMMNGTSLG* # PASA_UPDATE: g4229.t1, single gene model update, valid-1, status:[pasa:asmbl_4324,status:12], valid-1 NODE_2444_length_6241_cov_41.7099 . gene 79 1076 . + . ID=g4229;Name=g4229.t1 NODE_2444_length_6241_cov_41.7099 . mRNA 79 1076 . + . ID=g4229.t1;Parent=g4229;Name=g4229.t1 NODE_2444_length_6241_cov_41.7099 . five_prime_UTR 79 79 . + . ID=g4229.t1.utr5p1;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . exon 79 156 . + . ID=g4229.t1.exon1;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . CDS 80 156 . + 0 ID=cds.g4229.t1;Parent=g4229.t1;5_prime_partial=true NODE_2444_length_6241_cov_41.7099 . exon 395 493 . + . ID=g4229.t1.exon2;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . CDS 395 493 . + 1 ID=cds.g4229.t1;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . exon 683 1076 . + . ID=g4229.t1.exon3;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . CDS 683 764 . + 1 ID=cds.g4229.t1;Parent=g4229.t1 NODE_2444_length_6241_cov_41.7099 . three_prime_UTR 765 1076 . + . ID=g4229.t1.utr3p1;Parent=g4229.t1 #PROT g4229.t1 g4229 AFTKTLSYAQKFSSFQNGEAIMEIRKSLLEDKKLHEFEVASLANLCPETVEEAKSLIPSLMGRYENDDDLQELLDVIKNYKDFQT* # ORIGINAL: g4230.t1 original gene structure, not modified by PASA NODE_2444_length_6241_cov_41.7099 AUGUSTUS gene 1860 6067 . + . ID=g4230;Name=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS mRNA 1860 6067 . + . ID=g4230.t1;Parent=g4230;Name=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 1860 2388 . + . ID=g4230.t1.exon1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 1860 2388 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 2501 2679 . + . ID=g4230.t1.exon2;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 2501 2679 . + 2 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 2807 3040 . + . ID=g4230.t1.exon3;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 2807 3040 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 3278 3475 . + . ID=g4230.t1.exon4;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 3278 3475 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 3711 3866 . + . ID=g4230.t1.exon5;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 3711 3866 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 4000 4116 . + . ID=g4230.t1.exon6;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 4000 4116 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 4259 4396 . + . ID=g4230.t1.exon7;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 4259 4396 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 4596 4650 . + . ID=g4230.t1.exon8;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 4596 4650 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 4819 4923 . + . ID=g4230.t1.exon9;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 4819 4923 . + 2 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 5087 5197 . + . ID=g4230.t1.exon10;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 5087 5197 . + 2 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 5391 5476 . + . ID=g4230.t1.exon11;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 5391 5476 . + 2 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 5638 5745 . + . ID=g4230.t1.exon12;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 5638 5745 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS exon 5909 6067 . + . ID=g4230.t1.exon13;Parent=g4230.t1 NODE_2444_length_6241_cov_41.7099 AUGUSTUS CDS 5909 6067 . + 0 ID=cds.g4230.t1;Parent=g4230.t1 #PROT g4230.t1 g4230 MSSGGTSLPADGVLTNPIGVVNVSTAATTHSAISTAEVRDGARTDASSQPGKTPGKRHQLKLTLEPPSKRAKTEDTSHTNGVSHNLASNDNKASSGQRGSTGGDDMLLSSFSGPSKGKGKEPAESGSMDEATPMEIVRPAAATNGFGSAGGAASATRKPAAGQNGATKKLVIKSFKVPPKLPENYEAETWARLKDAIAAVHESRAVASSLEELYKSVENLCSHKCGPRIYDLLHAECANHVMLEKQKLVGGSGDNIAFLNLVDRLWQDHCRQMIMIRSIFLYLDRTYVLQTPNIASLWDTGLVLFRVHIMSDSLIERRTVSGLLELVERERIGETVDRSLLKSALRMFGSLGIYAESFEKAFLAASETFYANEGRVYMSQADAPKYLSHVEQRLREESDRVLHYLDSQTRKALIATVEKQMLETHVIPLLEKGFDELVDGQRVADLARMYQLFSRVSALDSTKLYYAAYIKKRGSTLVLDPEKDKSLVQDLLDFKARLDALMDDAFEKNEKFGHAMKEAFESFINMRQNKPAELIAKYIDEKLKAGNKEATEEELEHLLDKVMVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASVDAERSMLSKLKQECGGGFTTKLEGMFKDMDISRDIMASFRQSAKNMSKLGEIELGVHVLTMGYWPTYPPAEVHLPAELVRYQETFKSFYLSKHSGRRLVWQNSLGQCVILTHFPKVHNSFPAMLLVCLF* # ORIGINAL: g2376.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 710 1449 . - . ID=g2376;Name=g2376.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 710 1449 . - . ID=g2376.t1;Parent=g2376;Name=g2376.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 1355 1449 . - . ID=g2376.t1.exon1;Parent=g2376.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 1355 1449 . - 0 ID=cds.g2376.t1;Parent=g2376.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 710 911 . - . ID=g2376.t1.exon2;Parent=g2376.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 710 911 . - 1 ID=cds.g2376.t1;Parent=g2376.t1 #PROT g2376.t1 g2376 MDGLVPTLATFLAYAAMDLLLNHRFGIGAKLCNMPIEFEPLPMQSEDDFPEWANLSDSVKRELLDIELSLLADRQPRIDLKTIYQVIARSAAHRGFAP* # ORIGINAL: g2381.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 25386 26294 . + . ID=g2381;Name=g2381.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 25386 26294 . + . ID=g2381.t1;Parent=g2381;Name=g2381.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 25386 26294 . + . ID=g2381.t1.exon1;Parent=g2381.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 25386 26294 . + 0 ID=cds.g2381.t1;Parent=g2381.t1 #PROT g2381.t1 g2381 MPKLQKPKLVARGETRRLSEVSFEGVCDLLAECAPRSVVCLFGAGVSTSAGIPDFRSAGTGIFHDKDFAAKYGCSADDLFVRDKTNFVALDQFMQVMRQTAADVIASSRLPAAHKFLVDLQAAGKLRRVYTQNIDGLERAAGVRDEFLVEAHGSVFSDIVLYGDRVRTCRKKMIADIADAADRPDLLVIAGTSLTTEPMASMPRLLYDKVPRLYINRECPADWSSTWKASAARRQKRLAFGYPWNKRDVMYRGSCDDAFETLRGFAPVRRTGVPSMLQAHSSQSSESGYSSDSTVTSLSSIV* # ORIGINAL: g2379.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 21095 21955 . + . ID=g2379;Name=g2379.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 21095 21955 . + . ID=g2379.t1;Parent=g2379;Name=g2379.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 21095 21955 . + . ID=g2379.t1.exon1;Parent=g2379.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 21095 21955 . + 0 ID=cds.g2379.t1;Parent=g2379.t1 #PROT g2379.t1 g2379 MSVGRHFSISAGKGFTDTPNRARECGCSALQVFLGSPQAVDAKERKHEDLVAFASCLGGMYCVVHSAYTINFCYPVGSERHVAGVASIVRDLRGAAVMGAAGTVVHMGKNVVTLGLTDAQANANYVEGIIGALGASGTGRPKIILETAAGQGTEQCVKLEELGALYKQIPEKVRSRVAFCVDTCHVWAAGYDIGSAESVKQFFAKFDECVGGPIECIHFNGSLKGRGCRVDRHTCIAQGMIPLEGLKAVAQYAGRKGIPLIAETPCEGVEAKAEIEAICAFAQSVV* # ORIGINAL: g2378.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 19879 20763 . - . ID=g2378;Name=g2378.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 19879 20763 . - . ID=g2378.t1;Parent=g2378;Name=g2378.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 19879 20763 . - . ID=g2378.t1.exon1;Parent=g2378.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 19879 20763 . - 0 ID=cds.g2378.t1;Parent=g2378.t1 #PROT g2378.t1 g2378 MLFDDEEKQIAEEETRLAEEKRVLASDKNQIAEDERQLVAKKERIAATEVDLSEKEKNLAEKKATLAGKKRRAEERRRAEESLAEEEKTLAEEETKLEEKRKKLAAAKQKLAEEKLAEEKLAEEGETLAQRSDVLRKRPNESGNGEIPKRRRIESGQCDAAKTGAHGSGEGEGEDDDASGADIEPSYVIRDDKHWIELRGNPTEALRKLTASSDVATAKKCLPTKPSICHETEGNVNDHQDPTRLTTRISASKKVDDFRAKLNSRPAFVKYCDVTLSLAFAEAFCEFSERCFSC* # ORIGINAL: g2380.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 22570 24300 . - . ID=g2380;Name=g2380.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 22570 24300 . - . ID=g2380.t1;Parent=g2380;Name=g2380.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 22570 24300 . - . ID=g2380.t1.exon1;Parent=g2380.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 22570 24300 . - 0 ID=cds.g2380.t1;Parent=g2380.t1 #PROT g2380.t1 g2380 MYDLTGTHHHFKFPFSSLMKSLTSKLFEESKWVTTPHHPEKFLELSPVIKEMAECVALYGIKCSNPPPILPSEAFNDKTVRNEQFQRQVKRYESEMMFYEPHATLVKQVQARRANDMNAPRDPIVDFVTDAIEAGSKAVYMVAVAFYGWKKQLSYNEQCKYRESAKWQFEKYSKAWEAYVPPTSIRDTKAIPQHIQRWYDMWQSLQHSPHIGKSGKKLATFLYKKWLSVATQEGVASHEGVQDVTNQEERCNEPKRPFLDGVSITPEHPFTPVANTPTYEEFEEEMLKSGGDLKHVPRAWAAWVRANKRAYENESSSRWCKSTFALTSANPPYPDFGYQFDLAILTNLPHAPSPTLRQAPCTTLRQAPSTTLRQAPSTTIRQAPNIHLGASTQAYERHLHYITHDGNGGDPALCRYIQGLWLWNSDDADGIESGLEIIEKAAEMGFPMAQRHVAYCYAFGLGVDPDVCLAVKWFRLAADAGYPHACYDLGVCLFNGIGIKKSKSAALEWWKIATADGHRKAKNAMLQCPQCKVCLCATFRRCARCRTVYCSRDCQKQDWKAHKPLCVDGEFLASVD* # ORIGINAL: g2382.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 27056 27832 . + . ID=g2382;Name=g2382.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 27056 27832 . + . ID=g2382.t1;Parent=g2382;Name=g2382.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 27056 27832 . + . ID=g2382.t1.exon1;Parent=g2382.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 27056 27832 . + 0 ID=cds.g2382.t1;Parent=g2382.t1 #PROT g2382.t1 g2382 MADTQDPLTPSIFCLNITCVSADATFVSFYTLFGMETLMSLQVIVTSTGAVTTSTSMVLCAGIATTTYDKIFTGGFAMESTYADDTWTYVLPILLYKQTDETGIPRLRPDLYTELTFNLELSAEQTLVMTSTVFVRTDDSVTNILPAECILPAECTLSAECILFAARNLSTECILSAECSGLFATRNLSVVANWCTQSAARNLSADCTVCGAFCFVVHTVCGAQSVGGAHTVCGVHAVCGVYAVAECTLIAECTLIAE* # ORIGINAL: g2385.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 44400 45074 . - . ID=g2385;Name=g2385.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 44400 45074 . - . ID=g2385.t1;Parent=g2385;Name=g2385.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 44400 45074 . - . ID=g2385.t1.exon1;Parent=g2385.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 44400 45074 . - 0 ID=cds.g2385.t1;Parent=g2385.t1 #PROT g2385.t1 g2385 MANIIKADSDKRKLRFRTANDLWCPQHVISPHFVHQSAPTPTPASAPATTPISAGNKKFTSLEYLYTAKTEKTRVIETGEWQTPTAEHIDMSSAPPFPSYRDPNMKTQIDIVRQIDRESRFRQPTSTCPPDWYNTTWDEHVMTGAIRGPKNDGVRDLTYGQLDTNIVPQTRGGITLADAIPNSSFGTMTRQRNLRSFFPRNAALTQESPRQTACRLDEFGNCKR* # ORIGINAL: g2384.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 43738 44124 . + . ID=g2384;Name=g2384.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 43738 44124 . + . ID=g2384.t1;Parent=g2384;Name=g2384.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 43738 44124 . + . ID=g2384.t1.exon1;Parent=g2384.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 43738 44124 . + 0 ID=cds.g2384.t1;Parent=g2384.t1 #PROT g2384.t1 g2384 MIDERAPEFSYEAVEQLIWLNEGIGIFEIGTIEYIAWTPIDKQMEDVMEKNVKRGLMQMGGTDARCGQSPFKCHCAYDNWRSGLCSEILNVIERDMGRAVAIKHDLSSYDADDADDADDADNLLTDAN* # ORIGINAL: g2383.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 31007 32281 . - . ID=g2383;Name=g2383.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 31007 32281 . - . ID=g2383.t1;Parent=g2383;Name=g2383.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 31007 32281 . - . ID=g2383.t1.exon1;Parent=g2383.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 31007 32281 . - 0 ID=cds.g2383.t1;Parent=g2383.t1 #PROT g2383.t1 g2383 MFQEELEIHKLLDDHPNIVRLVSSLYYDKEGPALLFEMCELGSLHMYAKTLKRRLEDDELRFFGRQLFSAVSYIHRKGIVHRDIKPHNAFLKSDLTLKLGDFGLATSDIGDTRRCGTPNYLSPEMVNRLGCSFQTDAWSIGAFMYSLAYGKAPFAAETKKDTFSRITSIKYDNPDGNLKQFFQTIFTPYDVRILPEQMLQHPFFSWKTVSRPVRKTAFADLFRLVPDPPMQQSTVRFVWIARFTMWPEGLMYEMPNGFITMLFDNGTRLSVLRGHIIYSHFEKFVRYAASDVLPQDVSCSMEIFENRRQQMDGNMLQPPNLNHSKKYHKPILNFAQSDTMCVFHIRKGLFQITQGNTRAYLVDRSQQLVYTLSNKSTEIVAISDVLQGKHPKILAVLTEALRVSRRAPRGLVACPTDLVEDQPM* # ORIGINAL: g2377.t1 original gene structure, not modified by PASA NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS gene 6369 9188 . + . ID=g2377;Name=g2377.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS mRNA 6369 9188 . + . ID=g2377.t1;Parent=g2377;Name=g2377.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS exon 6369 9188 . + . ID=g2377.t1.exon1;Parent=g2377.t1 NODE_68_length_45504_cov_22.5957_potentialcontaminant AUGUSTUS CDS 6369 9188 . + 0 ID=cds.g2377.t1;Parent=g2377.t1 #PROT g2377.t1 g2377 MSETPNILQVHVINWDISRIDGIEFIEAFGRNDAGQSVCIRASGFRQYFYVEFPQEWIGRGGTGDVFALRKVAIAFVRYLNFRIRCTFDKRRWSYDPDVPFIQFDPEDDVCFKKKFWGFTNDKLFPFCRLNFRSRGEFSAAKSILKYPIKFVGACVTPTDGYRVKLHDSQIDGIVRFFHHRNIEPSGWVRVDNYDDLGNCSKCDMTVGAKWSDIYPIDRMPDSKIVIASFDIECVSQHGSGSFPIPTDTHSYVTMIGTVLKRYGEAEPYKRIMHSYRQCDDIPGVVVRSFDKELDMLLDWAKMISDEQVDITISFNGFGFDWNYIYQRVSEVYKVELEFLQLINRTYEPAKFVDRSLSTSARGDNKMQYVDAKGRLTIDMMKCIQWTYKLNSYSLNACSAHFIGDQKDDIDHHQISQYFHAGSDKRAIVGAYCIKDCELTMRLMDKLQTLTNDMAMSNVCCVPLSYMYFRGQSPRALSLVTKTCLEESKVVWDMKHYDDRLTVVAYDGATVLEPICKIHNEAIAVFDFQSLYPSLMIEFNLSHDTLVMEGAYDNLEGVEYHDRSYVDRSTGQMVHARYRKATTPSQYGILPKILMKLLKARADARLRMKTEKDPFRLSVLDSLQNSYKVVCNSVYGQTGAPTSHLYEVRIAAVVTASGREKLITTRDRLLQQYPGSVTVYGDTDSLFMRFVEGTDQAAFDTTMKLGEEASKFMDGHLNYPHKLNFEKIMWPLVMQKPKRYFGVKWERKGSAVVSDTIYMGTESKRRDNANIVKIVLDGMNKIILDSRNIGLAKAFVRTCLKDLLAGKYPLEDLVVTKSLRANYKNEDSIAHKVLAKRMVRRDPGMVINSNDRIPYVFIPVPRGVKEADVLQGERIEHPDYIRKNNIKPDYIYYVTNQIQKPVLRVLELADPNADRLFEDLLRDARNERQGMKSLKAWFS* # ORIGINAL: g8484.t1 original gene structure, not modified by PASA NODE_2580_length_5800_cov_43.7649 AUGUSTUS gene 5303 5800 . + . ID=g8484;Name=g8484.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS mRNA 5303 5800 . + . ID=g8484.t1;Parent=g8484;Name=g8484.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 5303 5800 . + . ID=g8484.t1.exon1;Parent=g8484.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 5303 5800 . + 0 ID=cds.g8484.t1;Parent=g8484.t1 #PROT g8484.t1 g8484 MESVGKFASGHDKGGSEGLTFHHNILRIVQLFVDVVRARRGDASSPVANMSSEVYDDIDMLYEEASAVLSENAQEHFEKMATYGLLLTKAARSIPAIAKSGPLVDFSLCGLRFRIFSGIENGHFEHFRVQIVEKMVEIAVSTDPELLEDLSRRRSREEERVVAAGK # ORIGINAL: g8483.t1 original gene structure, not modified by PASA NODE_2580_length_5800_cov_43.7649 AUGUSTUS gene 2 5104 . + . ID=g8483;Name=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS mRNA 2 5104 . + . ID=g8483.t1;Parent=g8483;Name=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 2 72 . + . ID=g8483.t1.exon1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 2 72 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 377 462 . + . ID=g8483.t1.exon2;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 377 462 . + 1 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 791 901 . + . ID=g8483.t1.exon3;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 791 901 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 1036 1140 . + . ID=g8483.t1.exon4;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 1036 1140 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 1382 1486 . + . ID=g8483.t1.exon5;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 1382 1486 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 1668 1772 . + . ID=g8483.t1.exon6;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 1668 1772 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 2177 2229 . + . ID=g8483.t1.exon7;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 2177 2229 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 2402 2575 . + . ID=g8483.t1.exon8;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 2402 2575 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 2933 3022 . + . ID=g8483.t1.exon9;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 2933 3022 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 3182 3268 . + . ID=g8483.t1.exon10;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 3182 3268 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 3441 3840 . + . ID=g8483.t1.exon11;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 3441 3840 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 4084 4268 . + . ID=g8483.t1.exon12;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 4084 4268 . + 2 ID=cds.g8483.t1;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS exon 4373 5104 . + . ID=g8483.t1.exon13;Parent=g8483.t1 NODE_2580_length_5800_cov_43.7649 AUGUSTUS CDS 4373 5104 . + 0 ID=cds.g8483.t1;Parent=g8483.t1 #PROT g8483.t1 g8483 PPTPAECERTDCKCNDNTGGNGTCLGVCSAKNFDYSQDCKACLPNYYNLTCSGGACQCTCLCVNGYCNSSGVGDCTSCKPGFWGAYCNQTCMCENAKSSECTQYDGRCTASECKAGFWGPSCRNVCACKNGRCSDGVSGTGQCIDGSCTSGLRGIYCNETCSCLNGGCDQTTPSGVCQATLGCTTGFAGPNLNIENSCVNGIADDGVGGTGLCRSCFSGFYGKRCESNCTCITLQGICSDGINGTGTCVSCRIGFASLNCERACSCKNGACDDGINGNGKCKNGTCDENFAGQECDECMDAFHFGRRCWECDTCDPGKICNATVRGNGKCYFVSAQQGPVAPAHTSGGSTSAVPIIAGAAAGGCALIGIVLLVTYRYARNKGQAMGSESTWQFFKSMKSARHTRESATVFLNPMHSSNSAAQQGVVASEMLPTAHVEIQYANLSVSRVSAATGEYDTIRAASAFSDSSDGASATLMAKVAMSASEGEDTVAADAIESKPAPSLFTLGDIASAATPSVIASLCAEVPALQWTVIRATPSLVVTGISDVILQYEARKRFQGFGGIHVSTPPSRVLRVRFDIDRIGNGELVGGGINSTFTNPPSGNITWTTVGTQEQINVVLGNLVFLPNDFQQTATIRVSVSDDGFNDPAVGRLRLYCPNEYNTAPHLRYPGSSVETKDGVFQAGQKFFVDLAAAFTDDDLAQQGDRLAFSIAYVGKDGRSVPLSEAQDIAGWSCYLDTATGLFSGMPAKAGSYQFRATATDLRGSTAD* # PASA_UPDATE: g8557.t1, single gene model update, valid-1, status:[pasa:asmbl_5572,status:12], valid-1 NODE_3107_length_4283_cov_47.1583 . gene 1 3718 . - . ID=g8557;Name=g8557.t1 NODE_3107_length_4283_cov_47.1583 . mRNA 1 3718 . - . ID=g8557.t1;Parent=g8557;Name=g8557.t1 NODE_3107_length_4283_cov_47.1583 . exon 3603 3718 . - . ID=g8557.t1.exon1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . CDS 3603 3718 . - 0 ID=cds.g8557.t1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . exon 1837 3375 . - . ID=g8557.t1.exon2;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . CDS 1837 3375 . - 1 ID=cds.g8557.t1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . exon 1471 1639 . - . ID=g8557.t1.exon3;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . CDS 1471 1639 . - 1 ID=cds.g8557.t1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . exon 1145 1300 . - . ID=g8557.t1.exon4;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . CDS 1145 1300 . - 0 ID=cds.g8557.t1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . exon 1 943 . - . ID=g8557.t1.exon5;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . CDS 80 943 . - 0 ID=cds.g8557.t1;Parent=g8557.t1 NODE_3107_length_4283_cov_47.1583 . three_prime_UTR 1 79 . - . ID=g8557.t1.utr3p1;Parent=g8557.t1 #PROT g8557.t1 g8557 MRSRPRAVDPYYEPKSPDDVTLVFESRFESGNLLRAVQVGEWEYDLTLKTDLYTSRHTQWFYFSIRNGRPKTRYRFNITNCMKTDSMYAHGLRPVVYSERDAESTGAGWSRAGEDIKYFRNGMKMYLRKTDRPLYTMSFAYEFKHVHDTVYFAHCYPYTYTDLHRHLTHLCSDPVRATFCRRRVLCRTLCGNACEMVTITAFASDPKELANRKGVVLTARVHPGETNGSWMMKGILDFLTGDTDEAKRLRSSFVFKIIPMLNPDGVIVGNYRCSLAGVDLNRRWKMPSRERFPTIFHAKQMVAALARSRDVLLYCDLHGHSRKADVFMYGCDDIHDPALRFQSRVFPRMMADASPSNFSYSSCKFRVQKSKESTARVVMWQEMGIQNSYTLEASFCGALLPGDLHRVHFTTADLEDVGRSLCLSLLAYADPNPDVIPACVARLCDDMLRKLMRLAAKQEASGLSASAAVTGSLNALSAVSATTASLASLSMQRQDPLSDATGGSVTRRRGSSDATADILAGTPGEGFSVDLSTIVALDDPFSQLSDSDLESLTSGSDDSVSSDDGSQQQKKPRLKLSKPFKPDLRRRKSVIVSAREKALAMRRLLEPREAIDVQKTSVLRGQTRGISSSADSVTSRVSSAGSARGQRDSPKQAKTTAQLQKEGTQEPLQQIRTLSRPKSSSNISPASRSQHASPTKLPSEGDIPDPCHDPSLPLHAHATASQQMQTTQPVPSAAHARLARAASAGTAMRRTVAFRKDDEPPALISIASMYDRTGSQSLTNSNGSLANASSLSSRGDSGGDQEQATFVPHTEHHFIHGSFVPARGIALGSQHYHHNHHNHHNHHHYAMSGTGTLSSAGSSFDGLVLGTTPFRHGMGSLPKGPTGATATAASVSASGGDASQGASGAASSPATGRTARRAKSAVLARSRVTLPISVAIARPMRVSGDMP* # PASA_UPDATE: g1541.t1, single gene model update, valid-1, status:[pasa:asmbl_10013,status:12], valid-1 NODE_925_length_15804_cov_40.7656 . gene 243 1634 . - . ID=g1541;Name=g1541.t1 NODE_925_length_15804_cov_40.7656 . mRNA 243 1634 . - . ID=g1541.t1;Parent=g1541;Name=g1541.t1 NODE_925_length_15804_cov_40.7656 . five_prime_UTR 1526 1634 . - . ID=g1541.t1.utr5p1;Parent=g1541.t1 NODE_925_length_15804_cov_40.7656 . exon 668 1634 . - . ID=g1541.t1.exon1;Parent=g1541.t1 NODE_925_length_15804_cov_40.7656 . CDS 668 1525 . - 0 ID=cds.g1541.t1;Parent=g1541.t1 NODE_925_length_15804_cov_40.7656 . exon 243 331 . - . ID=g1541.t1.exon2;Parent=g1541.t1 NODE_925_length_15804_cov_40.7656 . CDS 243 331 . - 0 ID=cds.g1541.t1;Parent=g1541.t1;3_prime_partial=true #PROT g1541.t1 g1541 MATLVGPTTTITAAAASAAGVPRAVSESAFTCIACRVAFADAEQQRTHYRTDWHRYNLKRKVAEMGPVTAENFDKRVLAQRADAAAAAKQQEYEGLCEACGKSYGTENAYNNHLNSKKHKDNAANHAEAPKQPKKTAEKAADAGAESVEPKDSNEAGSVASQPKRASGNEAGASTDAVNEDDLEAEYLARAVEIPIEECLFCGHHSKTLEDNVDHMTHAHSFFIPDIEYLVDLAGLIKYLGEKVGTGNMCLFCNGKGRALRSVEAARKHMIDKGHCKMVYEGDAELEYTDFYDFRSSYPDYDPNNPEAQDDNLPS # ORIGINAL: g1544.t1 original gene structure, not modified by PASA NODE_925_length_15804_cov_40.7656 AUGUSTUS gene 10165 10749 . + . ID=g1544;Name=g1544.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS mRNA 10165 10749 . + . ID=g1544.t1;Parent=g1544;Name=g1544.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 10165 10749 . + . ID=g1544.t1.exon1;Parent=g1544.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 10165 10749 . + 0 ID=cds.g1544.t1;Parent=g1544.t1 #PROT g1544.t1 g1544 MWEIYSLGKIPYGAGISNTDILEHILAGNRLPRPTPQCPASVYAIMHSCWASYPDDRPLFSTLVAQLRALESDFAAVDRSAVSDTAVSGVLGLGSCGDKLASVVVPPSSGTFHGASGPYDNATTGYVTLDGVTTRPDCNHKGCDTARECVLLSASGDCVPADATRPSKVRAAHHAPYDNVCVEFVSNVTHETAV* # ORIGINAL: g1542.t1 original gene structure, not modified by PASA NODE_925_length_15804_cov_40.7656 AUGUSTUS gene 2290 3972 . + . ID=g1542;Name=g1542.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS mRNA 2290 3972 . + . ID=g1542.t1;Parent=g1542;Name=g1542.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 2290 3972 . + . ID=g1542.t1.exon1;Parent=g1542.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 2290 3972 . + 0 ID=cds.g1542.t1;Parent=g1542.t1 #PROT g1542.t1 g1542 MPRYHVPVRRLQCAAHLLLIALWAIVAVEALSPNPLATVVTSIDTGITALNRPLHITVDLRGKAVETPRQVWTAFFGDVFILGNGSTVVVCPDSGLFDFGGGSVLSIVGVVLTGCRNAPAISARHGAKVQMEDVTIRGCVAGTGAIHLTDGASLSATTCTLAENVAVDGGHVSMAGGARAEFSQCEFSRGSSVRGGIFSVSSFARVTATDCVFSDSRAAFGGAFFASDAGAVIVTGGSVARVSVDATHINAVSASFALVGASNSFNGLVAGVLEQEDAACASGGAVAALRGTASCVLTGLSVSFTLARETHGSVAVVCSSASLVVESGDYVHLDGRVGPNGADARAIVASGSGAYVKVSSAAVYDAVGGFIWARDGARVRLEHSLVQNSTSIGDGGIVLLTASASLEASSLTVLDCASTEGSGGFIAVVDSATPDAINVQIGLSMVVGSTATQNGGAFYVNTGGIVMVSGSTFINLSSMDGGFAHIGGMGRVIVTETAVSNVNVLGAGGIAHLDGASGFVSEACTFQRLSASIAAVTKVTAVATWKISRHVSCVSIFVLS* # ORIGINAL: g1543.t1 original gene structure, not modified by PASA NODE_925_length_15804_cov_40.7656 AUGUSTUS gene 4238 8190 . + . ID=g1543;Name=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS mRNA 4238 8190 . + . ID=g1543.t1;Parent=g1543;Name=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 4238 7450 . + . ID=g1543.t1.exon1;Parent=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 4238 7450 . + 0 ID=cds.g1543.t1;Parent=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 7609 7858 . + . ID=g1543.t1.exon2;Parent=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 7609 7858 . + 0 ID=cds.g1543.t1;Parent=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 8099 8190 . + . ID=g1543.t1.exon3;Parent=g1543.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 8099 8190 . + 2 ID=cds.g1543.t1;Parent=g1543.t1 #PROT g1543.t1 g1543 MDNTTVSDVTAHQSALLRLVDGARATVTTVHLTGVVCDGISGDTASPADRSIGCLITAQIGAFVQLSAVHIQSAEVANLALVAIYRGAKCQMSEMTVRDVFAVDADASFAIVGPRSTIAIDGSSFARIDASSSRGFALATAVLSAAGGRLDVSETEFYEISGSASGPMVSGSQRSQVTLSSVLVARVQSMWSASLAVFVGEAVLTARVLQVSDAVSVASARGGVLYAAESAQISVSMATFDRVGVSANGSSGGVLAVYDSASVALSRSTIRQAFAAGSGAVLHSESTVEARVSDVMVTDATAPVGGCFSLSKSASLQLNLGELHGCHAVRRGGVVFALGGASSVHFNRVTITDAAGYVGGVVYLQGDPADAIAGTLRRYSVSLLDCDVRKATAKEGGVLYAGGSASIAIQRSSFADIAADGDGGVLSAKSYDADVTASVSDSVFEGISAGIQSSRGSGGLFSLQVAMAAVTVARCTIHDMSAATEGAILFASQTATVTIVNSTMSRINALHGGAVSMAWGVLVVDGCQFKTLITNGCFYLTVSVTATIRNTTMNTLQLSAAGSGLLFIDGISTADIQGMGVFNAVMFEGGDSTMGGLVHATGKSFVSLRGFVVRNIQWAGGGAGIAYIRGVATLDVQNADIAHVAASGDLASGGAFVVRDGGKLVVSDSVFFAVAASRDGGGMQLMHAAQATIHNVSFVDVKAGRDGGLVASMHGSRCTLKNVSAAGTHADSNGGFAHLSSVGSIVLADVSIGSASSGSHGGCFYLASQSPTLRINSSTAYACTAGEDPETYGSGGVLYFEANANAVVEIEGFVVASAAAMLGAIVFRDAPKIATPRFAELLVVNATARYAGSGNYTTSPDTLAAIPGNVTRTVRSGAVLPAFEVVVLDAYGAPSTISGIQQLSVVLVVRRGPCILAGGLIAYFTATPYVRFDSVSVFSNLSSIECILGFDSANFVYTSDSRLVTSFSMGVYVDECLAGFAIEKVDGGDSSTARYACVATPTVGSSGVVGGGSNTAMVVSVAVVVPVVCVSAVLAAVWVYVRRVKRKHSKRVHAEFVETQLSKRPELAALEVPRESVHLREQLGAGEFGVVYKAEVMFGARLRLCAAKTLRTDASIEDYENFVSEAHVMAPLRSQHVIGLAGLVLTTEPMMVLLEYAPHGDLRSFVGRFADMADISSQATAIER* # ORIGINAL: g1545.t1 original gene structure, not modified by PASA NODE_925_length_15804_cov_40.7656 AUGUSTUS gene 11864 15594 . + . ID=g1545;Name=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS mRNA 11864 15594 . + . ID=g1545.t1;Parent=g1545;Name=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 11864 11926 . + . ID=g1545.t1.exon1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 11864 11926 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 12159 12266 . + . ID=g1545.t1.exon2;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 12159 12266 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 12625 12753 . + . ID=g1545.t1.exon3;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 12625 12753 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 13212 13318 . + . ID=g1545.t1.exon4;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 13212 13318 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 13723 13801 . + . ID=g1545.t1.exon5;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 13723 13801 . + 1 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 14009 14113 . + . ID=g1545.t1.exon6;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 14009 14113 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 14431 14565 . + . ID=g1545.t1.exon7;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 14431 14565 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 14820 14937 . + . ID=g1545.t1.exon8;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 14820 14937 . + 0 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 15115 15199 . + . ID=g1545.t1.exon9;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 15115 15199 . + 2 ID=cds.g1545.t1;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS exon 15549 15594 . + . ID=g1545.t1.exon10;Parent=g1545.t1 NODE_925_length_15804_cov_40.7656 AUGUSTUS CDS 15549 15594 . + 1 ID=cds.g1545.t1;Parent=g1545.t1 #PROT g1545.t1 g1545 MWQNSFTRASRVSRAHTASLQLRRLVHREPLHPDWAKLASKELKGASPDTLLWKTSEGIVIKPVYTKRDASTAEEIPGAFPFTRGPYATMYTQKPWTIRQYAGFSTVEESNKFYKQNLAAGQQGLSVAFDLATHRGYDSDNQRVFGDVGMAGVAIDTVEDMKMLFDGIPLDKMSVSMTMNGAVLPVLAMYIVAAEEQGVDQSKLSGTIQNDILKEFMVRNTFIYPPKPSMTIIGDIFSYTSKYMPKYNSISISGYHMQEAGADSVLELAFTLSDGLEYCRTGLKAGMTIDDFAPRLSFFWAMGMNFYMVLKLRKCVLHVACGRI* # ORIGINAL: g1197.t1 original gene structure, not modified by PASA NODE_391_length_24949_cov_44.2807 AUGUSTUS gene 3557 4541 . - . ID=g1197;Name=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS mRNA 3557 4541 . - . ID=g1197.t1;Parent=g1197;Name=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 4421 4541 . - . ID=g1197.t1.exon1;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 4421 4541 . - 0 ID=cds.g1197.t1;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 4228 4334 . - . ID=g1197.t1.exon2;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 4228 4334 . - 2 ID=cds.g1197.t1;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 3975 4136 . - . ID=g1197.t1.exon3;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 3975 4136 . - 0 ID=cds.g1197.t1;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 3557 3820 . - . ID=g1197.t1.exon4;Parent=g1197.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 3557 3820 . - 0 ID=cds.g1197.t1;Parent=g1197.t1 #PROT g1197.t1 g1197 MRDVLLDLATVGNAASVKKLLVEGGDVNESNPYGHTPLINAAHNGHTDVVTILLAFHADPEMKDLNGETALMAAAKNGHIGVVKALVEAGADINTRDVYGLKAKHRARMAGKKETARYLEARRRDEKASKLKSQLSFSRISSAMTNTIPVEHVTTDDGNAVTRIGNAHDNSDSDDGSPRDHPKPNSRDQRLSAGVTGTHHEYDAESIEVSDPRGAWM* # ORIGINAL: g1201.t1 original gene structure, not modified by PASA NODE_391_length_24949_cov_44.2807 AUGUSTUS gene 22043 24870 . - . ID=g1201;Name=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS mRNA 22043 24870 . - . ID=g1201.t1;Parent=g1201;Name=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 24848 24870 . - . ID=g1201.t1.exon1;Parent=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 24848 24870 . - 0 ID=cds.g1201.t1;Parent=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 24392 24620 . - . ID=g1201.t1.exon2;Parent=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 24392 24620 . - 1 ID=cds.g1201.t1;Parent=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 22043 24154 . - . ID=g1201.t1.exon3;Parent=g1201.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 22043 24154 . - 0 ID=cds.g1201.t1;Parent=g1201.t1 #PROT g1201.t1 g1201 MLCGFFFFFITDQLFGGLGFVTGGSWLDAPPGFWMLTYGSVYVGNLQRNSVTAGLKGPSFDESDCYNNACPIPADGTGLIPGGFNPARLVTIYDGPFFSDKSVFMNVRNFTCDATLGVTDCGAYRLTNQPKEIGSTSRMVVTSAAIGWKQSNGFYYPPGFAFRRTAFDASTLRHTVVDITQPYLVSGPGAQPRELGAGLFDSIRPIDASTILIDEDGTLTGVVNPKTGRTSSVSSNTFFDTPPQMPECNAFGVQTTPFDTLTTVLTMAKPADGQAPNWKVSVEWGMIDPNGNPLDGGNTYATFPFVPIYRQLLTPADTKCTADICGGNVDARNNMFSCSHASMMAGSQTWSAPYLTMDGMTYYLDTHPQSLGGGICSRFKNFRAQQLFNGGKSYVLYQLYPQRTSNVTYQLYVGETFDIGSMGFFGRIFPTNYYGINAKEQAIVRMPSSFPGRASVSKGVLTVTLDNSQIASDFDFVNNDKWNRCLPRDVCELTSDESGCQVSSVVTDPHLRETLKDVCSHWVARAGGDSTAGPTLADCPRGGCLAYVFSLPAGFTPKPYSEVGLPLATEFTCDGTWGTPLIRANISMDNTCVGTPEGYCEMAYLDADGDGFGDPSKPRRAFSIAGGYVKNNRDCDDANANVNPSKPETCNNADDNCNGQVDEGVCVHPGPLPPAAHPPPHTSTAAASTSAPAAPTNTGSAGNGPDAVGLGDGGASSSSDVSTGGVVGIAVGCFVGGVAIAAAAAYLVATKGAASSAATGNPSDIQLNDVSSAPGKRTSMKTVPLDV* # PASA_UPDATE: g1200.t1, single gene model update, valid-1, status:[pasa:asmbl_6728,status:12],[pasa:asmbl_6729,status:12], valid-1 NODE_391_length_24949_cov_44.2807 . gene 20181 21695 . + . ID=g1200;Name=g1200.t1 NODE_391_length_24949_cov_44.2807 . mRNA 20181 21695 . + . ID=g1200.t1;Parent=g1200;Name=g1200.t1 NODE_391_length_24949_cov_44.2807 . five_prime_UTR 20181 20308 . + . ID=g1200.t1.utr5p1;Parent=g1200.t1 NODE_391_length_24949_cov_44.2807 . exon 20181 21695 . + . ID=g1200.t1.exon1;Parent=g1200.t1 NODE_391_length_24949_cov_44.2807 . CDS 20309 21607 . + 0 ID=cds.g1200.t1;Parent=g1200.t1 NODE_391_length_24949_cov_44.2807 . three_prime_UTR 21608 21695 . + . ID=g1200.t1.utr3p1;Parent=g1200.t1 #PROT g1200.t1 g1200 MDDNSGAIAALQSLAQDVLRNIKGSTSGFEDLLKQAGKHHTQLKATAATSSAFTAALAEVARTATDARGGTAQIGHALQQLVDAQRKVDAHLAEMARQLETVFATTLQAQVAKESKTVGKLEKQFEKSAEKGMKEIKKAGKATIKVEKAALKGKKGADAALEAAKEKMSESTRKLEDFHKETVRHFLIKERKRYCAVVSGLEPYLREAVSMHAEASSDMHSALQAAVDNAAEPDELPQDSEALLDSAASGQAQPPSSGQPAASRRMSMPVVSRQQSQDSSSSAALSSSAGARLVSSGPTLLAPGPSSRERAASVGVSSNVPPPMPVTPQRNAAPPTPTKPTAPLTVTRTPSGPSAGPPPPPPPPAMGGPPPPPPMMGGPPPPPPAMKGVPAGPPPPAGKGRGALLGDISKGAKLKKTKTNDRSSAPGAGKVK* # PASA_UPDATE: g1198.t1, single gene model update, valid-1, status:[pasa:asmbl_6727,status:12],[pasa:asmbl_6730,status:12], valid-1 NODE_391_length_24949_cov_44.2807 . gene 6692 16206 . + . ID=g1198;Name=g1198.t1 NODE_391_length_24949_cov_44.2807 . mRNA 6692 16206 . + . ID=g1198.t1;Parent=g1198;Name=g1198.t1 NODE_391_length_24949_cov_44.2807 . five_prime_UTR 6692 6749 . + . ID=g1198.t1.utr5p1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 6692 6963 . + . ID=g1198.t1.exon1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 6750 6963 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 7166 7186 . + . ID=g1198.t1.exon2;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 7166 7186 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 7525 7711 . + . ID=g1198.t1.exon3;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 7525 7711 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 7928 7943 . + . ID=g1198.t1.exon4;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 7928 7943 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 8173 8340 . + . ID=g1198.t1.exon5;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 8173 8340 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 8745 8801 . + . ID=g1198.t1.exon6;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 8745 8801 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 9140 9277 . + . ID=g1198.t1.exon7;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 9140 9277 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 9392 9662 . + . ID=g1198.t1.exon8;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 9392 9662 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 9768 9874 . + . ID=g1198.t1.exon9;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 9768 9874 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 10060 10244 . + . ID=g1198.t1.exon10;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 10060 10244 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 10501 10585 . + . ID=g1198.t1.exon11;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 10501 10585 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 10879 11050 . + . ID=g1198.t1.exon12;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 10879 11050 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 11178 11351 . + . ID=g1198.t1.exon13;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 11178 11351 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 11728 11751 . + . ID=g1198.t1.exon14;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 11728 11751 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 11875 11962 . + . ID=g1198.t1.exon15;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 11875 11962 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 12079 12165 . + . ID=g1198.t1.exon16;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 12079 12165 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 12352 12425 . + . ID=g1198.t1.exon17;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 12352 12425 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 12565 12625 . + . ID=g1198.t1.exon18;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 12565 12625 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 12721 12854 . + . ID=g1198.t1.exon19;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 12721 12854 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 13064 13539 . + . ID=g1198.t1.exon20;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 13064 13539 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 13720 13800 . + . ID=g1198.t1.exon21;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 13720 13800 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 14015 14137 . + . ID=g1198.t1.exon22;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 14015 14137 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 14288 14326 . + . ID=g1198.t1.exon23;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 14288 14326 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 14474 14574 . + . ID=g1198.t1.exon24;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 14474 14574 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 14843 14892 . + . ID=g1198.t1.exon25;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 14843 14892 . + 1 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 15035 15133 . + . ID=g1198.t1.exon26;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 15035 15133 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 15416 15561 . + . ID=g1198.t1.exon27;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 15416 15561 . + 2 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . exon 15760 16206 . + . ID=g1198.t1.exon28;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . CDS 15760 15813 . + 0 ID=cds.g1198.t1;Parent=g1198.t1 NODE_391_length_24949_cov_44.2807 . three_prime_UTR 15814 16206 . + . ID=g1198.t1.utr3p1;Parent=g1198.t1 #PROT g1198.t1 g1198 MTESRPASLATPCRRAAVRARSASLAWRAPFSVAAVVVVSMLLLSACPTPASSSALTKFRLGAIYPMTGPNQFIAGVPSRIGFITAVNKYRYAIPGVELETDIDGQGLILDDVSQAIRGLFNAFDLVQTKQVGAVIGAWNSAVSTQINRVTTHLGLVEVSSGSSSPALSEKVNFPTFTRTVPSDEAQYRLLTKLIKYQGWNKVAIAYSDDPFGEGGAVAFKDAAPGAGIDVIAFVSVAYDSLRLGKSMTSQVQRIIDSGARVIIISMATGDAQTFLDAAATLGITNKAGYVFVGADGWVLDDITTGWSGREDILRGVIGTAAAVVSGTQVYTDFLAAMVAANFSTAGPINQFTPYAYDAVMLCVAALNRTKTRLDALSVDIRCLEQGYRTTNAVACSLPDIVRDTVYNESMCIGMTNCRPKKGVSEFMKYLAASGATYGIHAKTPAIILLSELYNTDMYGTTGPLSFDQNGDRQGIFDINNGVGVLQGDGSYKITFKKIGSIALNKDGTADIQFSQPITYAGGSFTNYNHVKPPAYVDPRELAGSSSSNAAAIGGGVGGGVGGFVLIMIIVGFVVMRRRQEAQLNDMTWKLASEDIKKGAWGGVHTSSVFGSIASKMSGSHGSEARQQMFMAVGQWKEETVALRKLERESIDINRNLLREIKDVRACHHENLNRFVGIVTDPGNITLVTAYCPKGSLEDVLGESTFQLDWMFRYSLATDAARGMAFIHSSPIGSHGRLKSSNCLIDSRWILKITDYGLPSLRDPSKKESDRLYLSPELLRDPIVHPQGTPKGDVYAFAIVLQEIATRETPFFEVGADVNVVTKRVAQDGLRPAVTADTPAGIGRILSQLWAEDPESRPSFTTIVSALKDCNPNRNVSVMDNMAKMLETYANHLESLVVARTRELDEEKRKTEQLLYRMLPKAIAEDLKMGKTITAESFDQVTIFFSDIVGFTDIASKSTPLQVVDFLNDLYTCFDSIIDAYDVYKVETIGDAYMVVSGLPLRNGNRHAGEIATMALDLLCATNNFKIRHMPDSIHLQLRIGIHSGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFALRIHMSSTTADILKTLGSYHLELRGTLAVKGKGDMTTYWLTGKDGWTKPLPDLSKAASASQHHFK* # ORIGINAL: g1199.t1 original gene structure, not modified by PASA NODE_391_length_24949_cov_44.2807 AUGUSTUS gene 16395 19484 . - . ID=g1199;Name=g1199.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS mRNA 16395 19484 . - . ID=g1199.t1;Parent=g1199;Name=g1199.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS exon 16395 19484 . - . ID=g1199.t1.exon1;Parent=g1199.t1 NODE_391_length_24949_cov_44.2807 AUGUSTUS CDS 16395 19484 . - 0 ID=cds.g1199.t1;Parent=g1199.t1 #PROT g1199.t1 g1199 MDVGASAVRNGPCDGRRPRARDPQHIEGLVTAISPLLFVKDSAPFFMVEIAHTTTAAHASSNTPSDRTVTAGAPPSILTKAPVAPKVAPIAHAPFYVHHVIFRGDSLEAVRSSIRLRSMCRIEPVRRALLFPKSPGERMVLVVQNATLASVQSISAPSHVIDAIVAAENRSVMSLDVTLRTLSYAGTVTGVIDKAAGIYVLDGGKAWLCTTVGLRAPAATLPLGSSVVLCAVHAVRHGGIPVFVRCTRGSARMGGGTVDVGGCSGPHWLADSVSLPDYLWLRETCDGVVARLSPLLTPSMIWPSHALPNSHSSSYPSESKKCLARALAALCRIPYLSRSVYAEFLNHGTQSSTSVSTSGARNCPSASAQTPGCRIAITSTPCRPLVGVKAAQSWLEHSGSHVQSDADKAAQDAVIVGVVRPNRMGGVELADAEGCVPVCCVDLDVSHFGHVWAVRSASVAADCKSLCLSLKHCRKLATRRPLVANSNPNPDPSCHNDQSLPARVGIVTRRYLPVRDRVTQSSSFAVDVRWAPLTAGACRLEEAQILFGSSLMWAYPCIKEGGVYCFSGTFNRAHQLQGGGAVRVRASDDFCVDAAILACNDVASKAMVDHLIASPDSRRSGCEDTGGGGVAAVVEDPKLDMDGGEYRIDIVSFNGVVVSVAERKGDAVASASGGGAGAAPILCVKVRDVFLPHALDLYVDPARHVIPVGLWPGSRVVVGEALRKVSRNGNVYCNLFARSSLGLSAVCTDAVPVIPPPALGALPTRLLGSLATGTIRLPRASLFRLRATIALVLDISVRCECGRCGRPLSSDECPSGCITSGGSHAKRPVFSIRTRVCVEDGSGEATCYMFDETAIAVLGMSPARVALLRRMSSKHGTVYYSHVSVSRDALLAEGLATGMADVSAGSDSLAAAESVLMHIAQEASLRPVILYCRQHFAAIREDRPWDDRGVDFVSGAQQAHAQAQGQGPASVDTAGSLPYATRTVTLGGVEYVTRMCAKVALKAIAAEECAAGREAARLLDALHRTSAAL* # PASA_UPDATE: g9640.t1, single gene model update, valid-1, status:[pasa:asmbl_2938,status:12],[pasa:asmbl_2939,status:12],[pasa:asmbl_2940,status:12],[pasa:asmbl_2941,status:12],[pasa:asmbl_2942,status:12], valid-1 NODE_1898_length_8668_cov_41.1336 . gene 70 8050 . + . ID=g9640;Name=g9640.t1 NODE_1898_length_8668_cov_41.1336 . mRNA 70 8050 . + . ID=g9640.t1;Parent=g9640;Name=g9640.t1 NODE_1898_length_8668_cov_41.1336 . five_prime_UTR 70 70 . + . ID=g9640.t1.utr5p1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 70 438 . + . ID=g9640.t1.exon1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 71 438 . + 0 ID=cds.g9640.t1;Parent=g9640.t1;5_prime_partial=true NODE_1898_length_8668_cov_41.1336 . exon 573 935 . + . ID=g9640.t1.exon2;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 573 935 . + 1 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 1129 2518 . + . ID=g9640.t1.exon3;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 1129 2518 . + 1 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 2660 2924 . + . ID=g9640.t1.exon4;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 2660 2924 . + 0 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 3067 3604 . + . ID=g9640.t1.exon5;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 3067 3604 . + 2 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 3753 3859 . + . ID=g9640.t1.exon6;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 3753 3859 . + 1 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 4020 4244 . + . ID=g9640.t1.exon7;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 4020 4244 . + 2 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 4427 4603 . + . ID=g9640.t1.exon8;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 4427 4603 . + 2 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 4762 5309 . + . ID=g9640.t1.exon9;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 4762 5309 . + 2 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 5435 5516 . + . ID=g9640.t1.exon10;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 5435 5516 . + 0 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . exon 5693 8050 . + . ID=g9640.t1.exon11;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . CDS 5693 7620 . + 2 ID=cds.g9640.t1;Parent=g9640.t1 NODE_1898_length_8668_cov_41.1336 . three_prime_UTR 7621 8050 . + . ID=g9640.t1.utr3p1;Parent=g9640.t1 #PROT g9640.t1 g9640 CDGPAITEITPVEIESMQYRYGSQRGNPIVTVDSSTVRFQYALAFQVFFSVTGPCVDCFCYGHSVFDDRPIKEVRDIAGCDGLTASCYCSDASNTINGAWNKCELCKQGFCRTCNATSDDLCRFEDCEACDCNLHATTRLPNGKDLCAADGCGCSCIPGDNVEGDHCENCKKGYWSSTGNGKAGMTCTKCSCNGHKPLAVVGTDKECAVLGGNCDMDDSKCVDNTFGNNCQCCKAGFFRDSNDATLPCKPCACNGHGDATATYDFGAGCGTLAAECNPVGGVCACKAEDNVHGDHCESCNVGYWNDAGDAKDGKTCTACFCFGHKGLTNECAAKGGNCNFKYDGATEDKCAGNTVGANCEVCRPSYKYIDRTKNLNDVGTNYNTAPANDIRYGSCQACNCNSHSQEDPDVGSGICNPVTGLCINCGDNTHNGAAGECERCDSGFFRNLEGSYNRTKDTCDACMLAGGACDTESLTSKCRPCSTQCFGPNQSCEETTGKCLDCAASNARGYRCERCVPGFYGEPWDGIGCQKCLCYHSEPTLFEDIPNRDNVISGPLSCDLRTTKEKRTCFLDMTSLTPAIRAEIVDKDANGAGVWQAQQSAIQCNCPFDSTNGTFGVIYGGQMYTGRQCNACNPQGYFGRPTLCKAPDAAGVLIPEGPNACSEFFECSSCVCNRNIDFSNAIHNCNYDDADTSGVVCTSCLGSTTGDQCESCSPGYYGNAKRLDVLGSLGAGYVLDKDEKSLKCFKCDCNGQSIQRLVTQDGEDIWGISGDHCEAIGAGNPGDFVCGCREDLGYTGPKCRQCKRGYILKKGYDQNNVQNALYDYCEPCPDCVLNAYRDGIIPLEATYGTILRGITDINDTLTMLGPIDQPLVDLALELQEQFNSLSERLESAEAGTACRPNPCFNGGVCAVDETGLTVCHCKGIAKGVRCEDNVDQCANSPCKHGGNCTDLVNGYHCTCPSYYSGLSCEFATPCLPNPCNGDVCAILDDAAVCLCTGVNKGTHCEEKVDQCASNPCQNGGSCTDGYNSYTCACRIGWGGPTCTQRLLCEPNPCQFEGQCTVVDGQPQCSCRGAAKGETCEEGFDQCAPNPCFNNGVCIDKTDDYECKCGLGISGRNCELVNIPDVCVESVSVCGCPHDDVTCTCVVEAVFEKNDFLTIQSAPNYNNFDISVVFTTLQKDNPLIVGMYREYNQNKSSGSDLYAIALVGGRLNVVLATGNHKCTRGNCPLVTSLPMGPLVNDGTLYKVELNIRGSSATVTLTKRGDDTVIFQSSKAFNNSAGVAVNSDSWGVTYIGGLDPSKKAEWPVALRGYNSLQGAILSAAVGNTQVISLGGGTVTGSSQPTPRYANCAIINGNNTCLKPTLNVRKTTVAFAPVASQFVEVGAATLQTSGGVIRFASADPDLAYVNKMNLTVPKLSSFDSVHFSIGAANLAGGLIGLPAFVTPVYAIRLGACGADTPSEFDALGGFFAASTILRFEKHPIGGVQRVYALNRDTASLESLSPNIERTFTRHTGDYLLLAIDNDVDLLGVGLDTGFRPTVNGWPTNGIPSIRTQTDVTVAFVQWFWTVNGCGTALTTDLTPEQARMLVLLLEIRGTATPPLDAADHLVDQDVALSIVHALRVTGLPQIVFVFSAALNDWHTVLIYRFDATKGRFYVFDPVYNQDNTKYIRYDFVAKAFSPYDGFEQIRHYGFKVKRISGKDFASVYAAAKNNFVDARSPTISYSAETGTNLALTNQNLDFFGIRALLNVPAGSGVPLYVQPYTYGVSGRPLDQGFSSVDPVSKFFTKVLADLDSGNDTYVIIATGKYPSTPAEQCVGTSRDPLVAVGPRLNYYRPGFGFAIGVVSVKRPRPQLLTITLRWNLDHCDLDLYVKDPQGRVTWYGGKEQTLGGALVVDNIDGYGPESFVLGTPSLSNSRLFGQYAIAVQYYVDNNPPAVGVRTIPFSLIVRRGNDVVSRINDFATATNTTSSGTFPATDANGKSLDPSYVGPYLYTLPNK* # ORIGINAL: g2311.t1 original gene structure, not modified by PASA NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS gene 381 940 . + . ID=g2311;Name=g2311.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS mRNA 381 940 . + . ID=g2311.t1;Parent=g2311;Name=g2311.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 381 513 . + . ID=g2311.t1.exon1;Parent=g2311.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 381 513 . + 0 ID=cds.g2311.t1;Parent=g2311.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 657 940 . + . ID=g2311.t1.exon2;Parent=g2311.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 657 940 . + 2 ID=cds.g2311.t1;Parent=g2311.t1 #PROT g2311.t1 g2311 MAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHVETRPQFSQLVLQLRGMAALCGTEGGGGGHGGGINLDGANPTDGLSGGQSETYTLTVRKALMRR* # ORIGINAL: g2312.t1 original gene structure, not modified by PASA NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS gene 5089 5475 . + . ID=g2312;Name=g2312.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS mRNA 5089 5475 . + . ID=g2312.t1;Parent=g2312;Name=g2312.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 5089 5475 . + . ID=g2312.t1.exon1;Parent=g2312.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 5089 5475 . + 0 ID=cds.g2312.t1;Parent=g2312.t1 #PROT g2312.t1 g2312 MKQRVTVSLEHVRALWDGRALTATSRVRTIDSASTATVPATAETEPSAIDLQGCAQHSGVDGDEVRLGVCQQPLRHQLHPAVHLPKRSSMQPVYRNVHMHRRVDGHYVRCPVPPRTIRIELCPGVSMW* # ORIGINAL: g2313.t1 original gene structure, not modified by PASA NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS gene 5758 8531 . + . ID=g2313;Name=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS mRNA 5758 8531 . + . ID=g2313.t1;Parent=g2313;Name=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 5758 6030 . + . ID=g2313.t1.exon1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 5758 6030 . + 0 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 6117 6801 . + . ID=g2313.t1.exon2;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 6117 6801 . + 0 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 6925 7139 . + . ID=g2313.t1.exon3;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 6925 7139 . + 2 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 7255 7369 . + . ID=g2313.t1.exon4;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 7255 7369 . + 0 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 7496 7544 . + . ID=g2313.t1.exon5;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 7496 7544 . + 2 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 7627 7815 . + . ID=g2313.t1.exon6;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 7627 7815 . + 1 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 7890 8023 . + . ID=g2313.t1.exon7;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 7890 8023 . + 1 ID=cds.g2313.t1;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS exon 8134 8531 . + . ID=g2313.t1.exon8;Parent=g2313.t1 NODE_1864_length_8849_cov_24.7404_potentialcontaminant AUGUSTUS CDS 8134 8531 . + 2 ID=cds.g2313.t1;Parent=g2313.t1 #PROT g2313.t1 g2313 MYGYGCKTHCDCDNGACDPSNGVCMCDFGWTGVACNVIIPPSVPKLNATAELSQYGIGIRLRWFHDDVGPRPWGTWRYEISREGCFPKVYEVGDVLTFLDTDVAVNQGYSYYLRAFNSRNVSSATDALAGIKNLQKTDRPSPPYDVSSTATLNPDNKQQSMIKFTWKEDISSGPIIKTFIFRDSRLVLEGLMATEYKDFNVEFGKTYVYEIISANQYGNSTTTRFSETASVGPADSGTTAGASSSSNVAGPIAGGVVGAIVGAAGVVLAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYYADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKASDFTSADLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSIENGWKLSAKAQVIVKVADMGLSRDTGGSGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHAETRPQFSQLVLQLRRGMAALCGIEGGGGHGGGGHGGGGHCVNLDGANPKDGMSDGQSETYALTVRESAYAETLKPDEEEHLHTLENLMFQKDSNSTGHSSA* # ORIGINAL: g3822.t1 original gene structure, not modified by PASA NODE_448_length_23515_cov_41.1789 AUGUSTUS gene 20414 23440 . + . ID=g3822;Name=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS mRNA 20414 23440 . + . ID=g3822.t1;Parent=g3822;Name=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 20414 20506 . + . ID=g3822.t1.exon1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 20414 20506 . + 0 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 20827 20913 . + . ID=g3822.t1.exon2;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 20827 20913 . + 0 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 21389 21540 . + . ID=g3822.t1.exon3;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 21389 21540 . + 0 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 21698 21829 . + . ID=g3822.t1.exon4;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 21698 21829 . + 1 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 22133 22194 . + . ID=g3822.t1.exon5;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 22133 22194 . + 1 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 22453 22637 . + . ID=g3822.t1.exon6;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 22453 22637 . + 2 ID=cds.g3822.t1;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS exon 22917 23440 . + . ID=g3822.t1.exon7;Parent=g3822.t1 NODE_448_length_23515_cov_41.1789 AUGUSTUS CDS 22917 23440 . + 0 ID=cds.g3822.t1;Parent=g3822.t1 #PROT g3822.t1 g3822 MAGMLKKTLVKHLAMFLKNFSPDQINISFLKGEGELHNVQLNERFFEHLLELPRCFAIRKASANKIQLKLQWTKLKSDPIIISVDRIDVVVEGSFSMFPREQFADLGISDSKEKDHYGFINKVIDGMTVSIGRVRVEFHAPLFDGSMDISGVVLRSVDPNWRRAELPKTRVLLPRGEYVVLFRQLTIQSLTLFLKPRASVVSPVDGHVGSDSIGNLMGLPLSLTVNPVILQITMKKQVADSTIACVKMELIMEDIAWELDKGQLMGAVQFAAVVGDMLGRASDYEDELAEKKAAEVQLQQQKAAAHAHSNPRMHGQHPHGQQHGQPHAQANGPSHGGGHPGGAAGLQPGQSQGHAVPPGNASPAPVSKSQNFANHLQQGASVFQKEVASLLKMPETLKDKKDGTSKGSSAG # PASA_UPDATE: g3821.t1, single gene model update, valid-1, status:[pasa:asmbl_7363,status:3], valid-1 NODE_448_length_23515_cov_41.1789 . gene 15932 19703 . + . ID=g3821;Name=g3821.t1 NODE_448_length_23515_cov_41.1789 . mRNA 15932 19703 . + . ID=g3821.t1;Parent=g3821;Name=g3821.t1 NODE_448_length_23515_cov_41.1789 . five_prime_UTR 15932 16077 . + . ID=g3821.t1.utr5p1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 15932 16287 . + . ID=g3821.t1.exon1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 16078 16287 . + 0 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 16671 16810 . + . ID=g3821.t1.exon2;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 16671 16810 . + 0 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 17163 17301 . + . ID=g3821.t1.exon3;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 17163 17301 . + 1 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 17648 17771 . + . ID=g3821.t1.exon4;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 17648 17771 . + 0 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 17966 18056 . + . ID=g3821.t1.exon5;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 17966 18056 . + 2 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 18298 18422 . + . ID=g3821.t1.exon6;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 18298 18422 . + 1 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 18681 18766 . + . ID=g3821.t1.exon7;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 18681 18766 . + 2 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 19049 19126 . + . ID=g3821.t1.exon8;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 19049 19126 . + 0 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . exon 19319 19703 . + . ID=g3821.t1.exon9;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . CDS 19319 19426 . + 0 ID=cds.g3821.t1;Parent=g3821.t1 NODE_448_length_23515_cov_41.1789 . three_prime_UTR 19427 19703 . + . ID=g3821.t1.utr3p1;Parent=g3821.t1 #PROT g3821.t1 g3821 MAQPGHYALYGDVNVADLSHHQFYASRKLIPKATPFENDYILTTNTLGVGVNGQVKQCIQKSSGMVCALKILYDKPRSRMEIDLHFRCCEHPNIVEVVDVYENVINGKKRLMMVMECMRGGELFERIQKKSYFTEREASVLMGKITSAVHHMHSLNIAHRDLKPENLLFKDNSEESELKLTDFGFAKDTNDFALKTPCYTPYYVAPEILNVEGKASTSYDKSCDMWSLGVILYILLAGYPPFYSEGGQNISPGMKRRIRMGQYDFPQEEWNEISDEAKDLVQRLLNTDPAQRIQIDDVVTHPWISKSEDVPMTPLATPKVLKADTTYHETKEEMTQALASMRVDQSMNLKSLGDASSALLKRRQRD* # PASA_UPDATE: g3819.t1, single gene model update, valid-1, status:[pasa:asmbl_7361,status:12], valid-1 NODE_448_length_23515_cov_41.1789 . gene 6147 9632 . + . ID=g3819;Name=g3819.t1 NODE_448_length_23515_cov_41.1789 . mRNA 6147 9632 . + . ID=g3819.t1;Parent=g3819;Name=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 6147 6546 . + . ID=g3819.t1.exon1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 6147 6546 . + 0 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 6755 6972 . + . ID=g3819.t1.exon2;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 6755 6972 . + 2 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 7235 7349 . + . ID=g3819.t1.exon3;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 7235 7349 . + 0 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 7793 7841 . + . ID=g3819.t1.exon4;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 7793 7841 . + 2 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 8183 8371 . + . ID=g3819.t1.exon5;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 8183 8371 . + 1 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 8666 8799 . + . ID=g3819.t1.exon6;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 8666 8799 . + 1 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . exon 9172 9632 . + . ID=g3819.t1.exon7;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . CDS 9172 9485 . + 2 ID=cds.g3819.t1;Parent=g3819.t1 NODE_448_length_23515_cov_41.1789 . three_prime_UTR 9486 9632 . + . ID=g3819.t1.utr3p1;Parent=g3819.t1 #PROT g3819.t1 g3819 MTFALITACACDNGGICSDGVSGTGICNCTVSLAFGLGGPNCNTSQIPPNTGNNGAGASTGSIGAIAGGVVGAVFGAAAVLFAILLFRKRMSRHKFERAAQSELELIDTVVRRPEIAEIEIPGSCIRLKNRIGEGEFGEVYLADVKMERGATVTTIRCAVKTFKVTSMSSAHEIRSARSAFMAEIDLMRSIPAHGNIITLLGVCTQTDPNCMVLEYAEHGDLRHFLMDGKPTDFTPTDLLCFCIDIALGMEHLAKCQIVHRDLAARNCMVVAGPRPYNATESDWKLSPKAQVIVKVADMGLSRDTGANSDYYAAKTKRKLPVKWMAPESLLKKVFTSSSDVWSFGITMWEVFSRGSKPYPGLENHAVAAYLAENMRMDPPKQCPAQVQVAMAACWQQRPETRPPFSQLVTRLQRAIQEPQFGEPDVKTPANGAYAVLEPDLNNAALYATLHQDNPYVACHPNPAFQTDAGYI* # PASA_UPDATE: g3820.t1, single gene model update, valid-1, status:[pasa:asmbl_7362,status:12], valid-1 NODE_448_length_23515_cov_41.1789 . gene 12271 15296 . + . ID=g3820;Name=g3820.t1 NODE_448_length_23515_cov_41.1789 . mRNA 12271 15296 . + . ID=g3820.t1;Parent=g3820;Name=g3820.t1 NODE_448_length_23515_cov_41.1789 . five_prime_UTR 12271 12334 . + . ID=g3820.t1.utr5p1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . exon 12271 12796 . + . ID=g3820.t1.exon1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . CDS 12335 12796 . + 0 ID=cds.g3820.t1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . exon 12940 13118 . + . ID=g3820.t1.exon2;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . CDS 12940 13118 . + 0 ID=cds.g3820.t1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . exon 13488 13862 . + . ID=g3820.t1.exon3;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . CDS 13488 13862 . + 1 ID=cds.g3820.t1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . exon 14088 15296 . + . ID=g3820.t1.exon4;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . CDS 14088 15252 . + 1 ID=cds.g3820.t1;Parent=g3820.t1 NODE_448_length_23515_cov_41.1789 . three_prime_UTR 15253 15296 . + . ID=g3820.t1.utr3p1;Parent=g3820.t1 #PROT g3820.t1 g3820 MGPRADKRRRVLGMMVLGCVCLGAILWPRQGEHAEPTGVVEPEVGADLHRISLTSDNLTRPTTFVSAAVLDAIIKRGESAAEGTGHLVPRVGPDEFARRLAVAQNDAPATEEELARDFTVVISLRDTNGFLSECIKAVLAYTPVGVRIIMVYSQPMAPRQMRAIEEAKSARASFEAHEILTHFANANLMRQYGADIATTPLVAFANSDTLPGEGWLSAFHLAAKYNPDYKVFVSYLLNVFDDDPSSIRTRHEATSGMIDGVYPINASHVGTRSDGLPTFRLSLRDVKRDAARAVVGKVPWYDAGDLPALHIPAIRREITAADFPGGPLFHPIGSEFFNHLSNGLILAHMGARVMVTDTIETILTHKPLSNLEEEITTFAVYRSTAACESFGRHLLEEWGIDYSGHNCIRIVDKTVGGATHSSYRPPSSAVIRARLLIAWASFVGWNRFVVSEIPRGDKVTSVGGVDDGWAPADPLAHVYTGDLSHDSAGVGFVEAIRQAEERCTTGACHVRLLLDPDATPLKMNPNRFKRAAVAAGRLVPVLPRTGSAVSCYSERSTPQDTVPLPYPGETCVAIRYPPFAVVEVAVTHPETVAVSSELFNASALVVTVARGQQQNVTYLWYYVRHDVTKEARDAAIAVFAMATRVGGVFGGEGTTSTSARVVSLCSTETDHLVHGRPSGWAEACTAGVHILGSARTGDEWAEDWHFLRWQWTTLDVAKFKNAVVRH* # ORIGINAL: g4624.t1 original gene structure, not modified by PASA NODE_3406_length_3542_cov_34.4073 AUGUSTUS gene 68 1494 . - . ID=g4624;Name=g4624.t1 NODE_3406_length_3542_cov_34.4073 AUGUSTUS mRNA 68 1494 . - . ID=g4624.t1;Parent=g4624;Name=g4624.t1 NODE_3406_length_3542_cov_34.4073 AUGUSTUS exon 1427 1494 . - . ID=g4624.t1.exon1;Parent=g4624.t1 NODE_3406_length_3542_cov_34.4073 AUGUSTUS CDS 1427 1494 . - 0 ID=cds.g4624.t1;Parent=g4624.t1 NODE_3406_length_3542_cov_34.4073 AUGUSTUS exon 68 1321 . - . ID=g4624.t1.exon2;Parent=g4624.t1 NODE_3406_length_3542_cov_34.4073 AUGUSTUS CDS 68 1321 . - 1 ID=cds.g4624.t1;Parent=g4624.t1 #PROT g4624.t1 g4624 MEKPFRIYALDSDDDVVVGDKRRSSLLPAASVDSGRDATVLDTQRIDGVAATQVAYAGAGSQSVVIGSATQASNEVTAQDTHTYAAEGDGSESDALIETTVRRKRLARRKVVDESSDDDDTALSAMRTAKRRRVDSTSPRNTVTLSERVTRSATNITPSRGATTTAGVVNDLSLVKPHRRTPVAVLRRVRAATRDHTRNRNIFGSDLDDDDSGDDSGDVVPSESSDKDDGDRRGGIRGGGVGSGTTAVRSRRAGKASRDYDESDDVLADPESDVTPRTLRRRQYDDDLRDFIVNDSDVEEEGEEEEAEAEANGGGNANSDSEDDALKIARLCKTKLNRRGRAGAGATVHRQSLTTTVEEPIAKVRTPLQRAKVDSPAKKGVSPAKRGQGGSNPYPLVHNAFAAGRIETGVADLKLSGDYVLYRVVDAVKPLLEHYRESDG # PASA_UPDATE: g4625.t1, single gene model update, valid-1, status:[pasa:asmbl_6026,status:12], valid-1 NODE_3406_length_3542_cov_34.4073 . gene 2020 2996 . + . ID=g4625;Name=g4625.t1 NODE_3406_length_3542_cov_34.4073 . mRNA 2020 2996 . + . ID=g4625.t1;Parent=g4625;Name=g4625.t1 NODE_3406_length_3542_cov_34.4073 . five_prime_UTR 2020 2209 . + . ID=g4625.t1.utr5p1;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . exon 2020 2326 . + . ID=g4625.t1.exon1;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . CDS 2210 2326 . + 0 ID=cds.g4625.t1;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . exon 2696 2769 . + . ID=g4625.t1.exon2;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . CDS 2696 2769 . + 0 ID=cds.g4625.t1;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . exon 2889 2996 . + . ID=g4625.t1.exon3;Parent=g4625.t1 NODE_3406_length_3542_cov_34.4073 . CDS 2889 2996 . + 1 ID=cds.g4625.t1;Parent=g4625.t1;3_prime_partial=true #PROT g4625.t1 g4625 MADAAGSGDEYNEEVIDGANGNERILAAAKRDHVDMLKEVLAEAPGTYDVNAIDGIGWSALHYCGYFNSVEVAALLLQQQGINPDVKNSQWETPLHVAA # ORIGINAL: g10719.t1 original gene structure, not modified by PASA NODE_2754_length_5230_cov_36.7827 AUGUSTUS gene 1042 2037 . - . ID=g10719;Name=g10719.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS mRNA 1042 2037 . - . ID=g10719.t1;Parent=g10719;Name=g10719.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 1042 2037 . - . ID=g10719.t1.exon1;Parent=g10719.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 1042 2037 . - 0 ID=cds.g10719.t1;Parent=g10719.t1 #PROT g10719.t1 g10719 MIKEIPRPLDLFTAAFVNRLDAGPLSAPLPFDDAFGAEFGPCGSSTNSPIKFLANGAFFSADIVAADLAQTVASSLSHCAGLVPMNNCVAYGSACFHDSPCNCNGHSEGVVPTADTVDDNVTFVGAAGDSSVSGDQVPSIFLLYGDDGDYTDRDGAAERRISEVSADDNSDACMDASEDASGDMSDFEESSLARELNVAYGSGGLDWGSGLDMTFAESLASLSGAAGKTSTARKHPRRRQSQLALSPVLGGRPETQKEQEQRRKEKNKVSARKCRARRDEETHKLRNHVASLLADHRSLRDEKAALQREICAIKEALIQHYKGGCRISLGC* # ORIGINAL: g10720.t1 original gene structure, not modified by PASA NODE_2754_length_5230_cov_36.7827 AUGUSTUS gene 2770 4625 . - . ID=g10720;Name=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS mRNA 2770 4625 . - . ID=g10720.t1;Parent=g10720;Name=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 4446 4625 . - . ID=g10720.t1.exon1;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 4446 4625 . - 0 ID=cds.g10720.t1;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 4040 4150 . - . ID=g10720.t1.exon2;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 4040 4150 . - 0 ID=cds.g10720.t1;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 3633 3706 . - . ID=g10720.t1.exon3;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 3633 3706 . - 0 ID=cds.g10720.t1;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 3204 3323 . - . ID=g10720.t1.exon4;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 3204 3323 . - 1 ID=cds.g10720.t1;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 2770 2884 . - . ID=g10720.t1.exon5;Parent=g10720.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 2770 2884 . - 1 ID=cds.g10720.t1;Parent=g10720.t1 #PROT g10720.t1 g10720 MSTVRFDSASSTQSDKTTTERFRVKPARKVPAPPASSIKAEGSVRLVCISDTHLRTDNLVVPPGDILIHAGDFTSTGKQTEVEHFVAFMKSQPHQHKIVIAGNHEIPFDEDKCNDGSGFGRRFHRFQMFDGNELKDIVRSCCTYLQDEAVTVCGLRIYGSPWQPEFFNWAFNLPRGPAILEKWRKIPSDVDVLITRTFN* # ORIGINAL: g10718.t1 original gene structure, not modified by PASA NODE_2754_length_5230_cov_36.7827 AUGUSTUS gene 2 638 . + . ID=g10718;Name=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS mRNA 2 638 . + . ID=g10718.t1;Parent=g10718;Name=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 2 200 . + . ID=g10718.t1.exon1;Parent=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 2 200 . + 1 ID=cds.g10718.t1;Parent=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 332 446 . + . ID=g10718.t1.exon2;Parent=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 332 446 . + 0 ID=cds.g10718.t1;Parent=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS exon 586 638 . + . ID=g10718.t1.exon3;Parent=g10718.t1 NODE_2754_length_5230_cov_36.7827 AUGUSTUS CDS 586 638 . + 2 ID=cds.g10718.t1;Parent=g10718.t1 #PROT g10718.t1 g10718 PPSAPAPPPPPPMGGPPPPGPAPGGFLGAIQGGVQLKKAEVQEKAPGERGGLLASIQGFDSGRLKKADATERPPPPAESGDLDGMAAALANALASRKNVMMKESDDEDDGDDNGDDDEWDD* # ORIGINAL: g10156.t1 original gene structure, not modified by PASA NODE_487_length_22712_cov_40.065 AUGUSTUS gene 7531 9603 . + . ID=g10156;Name=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS mRNA 7531 9603 . + . ID=g10156.t1;Parent=g10156;Name=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 7531 7629 . + . ID=g10156.t1.exon1;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 7531 7629 . + 0 ID=cds.g10156.t1;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 8069 8235 . + . ID=g10156.t1.exon2;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 8069 8235 . + 0 ID=cds.g10156.t1;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 8502 9063 . + . ID=g10156.t1.exon3;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 8502 9063 . + 1 ID=cds.g10156.t1;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 9307 9603 . + . ID=g10156.t1.exon4;Parent=g10156.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 9307 9603 . + 0 ID=cds.g10156.t1;Parent=g10156.t1 #PROT g10156.t1 g10156 MASPSDPAAAAALPTLELLSLPDDALDLIFSEESLSSDDLANASLSCKRLHNFAEDQARRRVAFKWDKLEECVLYPDGQLYPPFMDKNVHLIFQDENLFGKWLLDNSLRPLKRPCDSWICVLHRECANTAEVVAKDNKLFHAHIALQEAKPDWGLPEMVAKSLSDKDRHTISKLLSRVTLTERAYKPETLGAYLREETEYRTAATIAIAPPPLAHKATAETSSAAALPTPGRVPILFQFGETQDCDRSYDIRDTASYAWIKAGDTLKLFFRNSSCSMCKKQWNVAYGVLKKNYPERVSYKAFLVVLRTAIEAVFTIDKLKTDGKYAQIMPWAQLHTTDYRESILLRASVKRSSWISTALSIGSSTGTASLRIHS* # ORIGINAL: g10155.t1 original gene structure, not modified by PASA NODE_487_length_22712_cov_40.065 AUGUSTUS gene 388 6552 . - . ID=g10155;Name=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS mRNA 388 6552 . - . ID=g10155.t1;Parent=g10155;Name=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 6520 6552 . - . ID=g10155.t1.exon1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 6520 6552 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 6187 6236 . - . ID=g10155.t1.exon2;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 6187 6236 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 5910 6030 . - . ID=g10155.t1.exon3;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 5910 6030 . - 1 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 5541 5666 . - . ID=g10155.t1.exon4;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 5541 5666 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 5021 5167 . - . ID=g10155.t1.exon5;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 5021 5167 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 4481 4615 . - . ID=g10155.t1.exon6;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 4481 4615 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 3976 4276 . - . ID=g10155.t1.exon7;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 3976 4276 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 3500 3786 . - . ID=g10155.t1.exon8;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 3500 3786 . - 2 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 2860 3189 . - . ID=g10155.t1.exon9;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 2860 3189 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 1817 2716 . - . ID=g10155.t1.exon10;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 1817 2716 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 1114 1394 . - . ID=g10155.t1.exon11;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 1114 1394 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 868 943 . - . ID=g10155.t1.exon12;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 868 943 . - 1 ID=cds.g10155.t1;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 388 600 . - . ID=g10155.t1.exon13;Parent=g10155.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 388 600 . - 0 ID=cds.g10155.t1;Parent=g10155.t1 #PROT g10155.t1 g10155 MTIYCDGRDGWGPKIAGTNDLTPCSITTLLGLIPYGALSLVLIIATLIVRRRTRLALPRLYRGHWMRWTVSSFTFLSIVAELFAVALSYGSPSSAPAVWFACPAALVLMLASSIVYYDVCERRGVVRPLILTLLANGAACGSMAYRLWYFATATTFANTALASLDLLFALRVVTCTGLGLLFAIDALLQLFGKGAVEDDESLDIAAWSNLHFVHQWSNLFSRLSFSWLQPIVTLGNQRDLQLTDLGMLCKADDAAMCGSALTEALNSLKRAGRPSLWWALFAVHKRKMAYAGLCKLFGDLCSFAGPLCLSGIVKFVEDAQDAPTPSNSTIASLSGVHGNHSSLLHNGKRDPSSVSVSDFLSNGWVLSVILLLTSVMQSVLLHQHHFMVIRQGIQARSAAQVAVYEKSLRLSSTARRNFTAGQIVNYMSKDGMSIMYLFFFIHYSWSTFVQIGITLVLLYRYIGYASLCGFAMMVLIMPAQALLVGRISVWKQRTLEADDDRMKRVNELIQSIKIIKLYSWEVPFLRQLHAIRAVELGHLLLVSIYQALTVFLLQGAPILVTLAAFGAFAAISNSELTPQIAFASLALFNLMRIPLFMVPMLVQTITDARVSETRISAFLNADELRDGLPDLNPPQRPSGTKHDSGSRRRQSSTSTQIPRTTGGYARLSDGRSESLVSSINDGDIDVDGHDDIGQITVAPALIETSVAFDGEGNPIVRRRESLVLAPRTPVAQQTIGDDDARDAAVRDDLARGGGVAGRGSVFRFPDPQHPVHPSLPSVEVTNATFTWERSSLHATVAGVSLKLYPGTLAMVVGPVGAGKSSLVSAILGEMEMTEGSRIVRGRVAYVAQQSWILNATLKDNILFGMPLDEAKYQRVIADSALAPDLAMLPAGDSTEIGEKGINLSGGQKQRVSVARALYSDADVLVMDDPFSALDAHVGLHVFKRAVLPLVRANKTVVLVTHQLQFLSNANVVVFMRDMSVVAAGTKEELSERNIEYLVGQ # PASA_UPDATE: g10159.t1, single gene model update, valid-1, status:[pasa:asmbl_7690,status:12], valid-1 NODE_487_length_22712_cov_40.065 . gene 16232 22599 . + . ID=g10159;Name=g10159.t1 NODE_487_length_22712_cov_40.065 . mRNA 16232 22599 . + . ID=g10159.t1;Parent=g10159;Name=g10159.t1 NODE_487_length_22712_cov_40.065 . five_prime_UTR 16232 16536 . + . ID=g10159.t1.utr5p1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 16232 16675 . + . ID=g10159.t1.exon1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 16537 16675 . + 0 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 16819 16980 . + . ID=g10159.t1.exon2;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 16819 16980 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 17268 17428 . + . ID=g10159.t1.exon3;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 17268 17428 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 17712 17913 . + . ID=g10159.t1.exon4;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 17712 17913 . + 0 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 18038 18553 . + . ID=g10159.t1.exon5;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 18038 18553 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 18724 18876 . + . ID=g10159.t1.exon6;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 18724 18876 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 19154 19324 . + . ID=g10159.t1.exon7;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 19154 19324 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 19593 19734 . + . ID=g10159.t1.exon8;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 19593 19734 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 19941 20116 . + . ID=g10159.t1.exon9;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 19941 20116 . + 1 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 20386 20811 . + . ID=g10159.t1.exon10;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 20386 20811 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 21046 21247 . + . ID=g10159.t1.exon11;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 21046 21247 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 21517 21602 . + . ID=g10159.t1.exon12;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 21517 21602 . + 1 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 21772 22109 . + . ID=g10159.t1.exon13;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 21772 22109 . + 2 ID=cds.g10159.t1;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . exon 22368 22599 . + . ID=g10159.t1.exon14;Parent=g10159.t1 NODE_487_length_22712_cov_40.065 . CDS 22368 22599 . + 0 ID=cds.g10159.t1;Parent=g10159.t1;3_prime_partial=true #PROT g10159.t1 g10159 MGSSIQHRNKATTTLPRALGVILAAALTLPFCNGTHYVGILVESTPSSVEGDPFFRGAMRGCRKAIWELESSGHLSPGGVVCDYIYTDTANDGTVTKAATNASMAHVIGSGFLWLDPITRQSDIFHNMTFSVVDTDVSDEFTNVQGLVFADDEGGFLAGVVAGLSTRVRIVGCLPGIPYPPLQRFRNSFLNGVLYVCPDCIVLGKYIDTFTDLELAVNATKEVIEGGIDVLFGAAGIASTAAIEYAAEKSVSVIGVDNDARLLTFTDPNAPRSQFLLTSAEKRVDTAVYLSLKDRFGTGVVSPPSAAGFVGGTKLVDARLGGIGLTECASTRACSIYAEPISVQDTSAAGGCPVLRSMLRGDRIIQIERKVQLGELQTGVDRGTGYLSILTANGGGWTELRPFGFRPPALTGHAAAIASDNCMVLFGGEGVGGVISGDVFELNYDEYEWRRIAHSASGWPMARAQHTFVAVMNLLVLYGGSPVAAGNSSGSPLGDVWTYNATSKLWTQRPTSGVTTPTARAYHVATAIGSRMYVFGGINTGLALNNELWELDVLSWTWHRLDPATSVRPPASRRGVMIALPSRNELYLFGGQSTTKRTEDGLYAFDLDTLTWTRKSPSGVAPSGASELSGVAIGNRLFFFGGLSLVGSDSSTGASATSIIYDAEDDMWTTVGAKNLPIPIYSHVAVSFNQSAKPNACVYHTPLEFLSICKPAPLPIILVFGGSDINGATQSLYMMMSPTKMIDSGPISSGSPSSNNTVKIVTPAVLCTAFALVCLSLIAYRWRRGTSAARDWLIKLEDIEIMSQLGKGSFGLVYKGRWRGTIVAVKTIESDAWVVSRLGINSSGSGPDEAPHRKSIHQMRLEQGAQTLMVSMRKVEHPSASLSRSGPVRIPDTISEHDSGGDGSENGTVHAQTAVHPHAGRRRNGKTDRSRQREAVGALTGEIQMMCALRHPNIVLFMGACLEPGSMAVVMEYMGNGSLVDLFGDEEMRWDWRFRLELAIDAASGMTYLHSATPPILHLDLKSPNLLIDNRMRLK # PASA_UPDATE: g10158.t1, single gene model update, valid-1, status:[pasa:asmbl_7685,status:12],[pasa:asmbl_7689,status:12], valid-1 NODE_487_length_22712_cov_40.065 . gene 10292 15910 . + . ID=g10158;Name=g10158.t1 NODE_487_length_22712_cov_40.065 . mRNA 10292 15910 . + . ID=g10158.t1;Parent=g10158;Name=g10158.t1 NODE_487_length_22712_cov_40.065 . five_prime_UTR 10292 10329 . + . ID=g10158.t1.utr5p1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 10292 11265 . + . ID=g10158.t1.exon1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 10330 11265 . + 0 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 11663 11810 . + . ID=g10158.t1.exon2;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 11663 11810 . + 0 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 12014 12144 . + . ID=g10158.t1.exon3;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 12014 12144 . + 2 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 12374 12711 . + . ID=g10158.t1.exon4;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 12374 12711 . + 0 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 12912 13073 . + . ID=g10158.t1.exon5;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 12912 13073 . + 1 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 13357 13976 . + . ID=g10158.t1.exon6;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 13357 13976 . + 1 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 14166 14299 . + . ID=g10158.t1.exon7;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 14166 14299 . + 2 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 14483 14598 . + . ID=g10158.t1.exon8;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 14483 14598 . + 0 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 14888 15042 . + . ID=g10158.t1.exon9;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 14888 15042 . + 1 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 15200 15245 . + . ID=g10158.t1.exon10;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 15200 15245 . + 2 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . exon 15476 15910 . + . ID=g10158.t1.exon11;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . CDS 15476 15650 . + 1 ID=cds.g10158.t1;Parent=g10158.t1 NODE_487_length_22712_cov_40.065 . three_prime_UTR 15651 15910 . + . ID=g10158.t1.utr3p1;Parent=g10158.t1 #PROT g10158.t1 g10158 MKSRRSHGASSANATVEGPQSSNDDNTGRVNQGGRKAKRPRTAAPASPPSMRIDDMDENDSDGGSASDTLYSLARQTHGSARVAIEADIIDLTQESINLLNTASSSDFEAPSVQFIASVERVTGGRKAAAQRNRTPRTPSAPNAPMTLSGVPFVEGDGSESDTLYSLAPPQRVEEEQHSDSSEGASDAVTPTLRRPRGRSNNQQRLPATPRSTGRLARSAPRSAGSRRNNGRTSVGADSNSDSDSDGSSDFDGSSTSSDDEASESDDDSSSSSQSAAPARSQRRSRASGVRRPRAAKREKKPAGYTCEEHDAEFLTDHVRVVKESPAPEGLTMPLLPYQRESITWMTAQEHNPSMRGGILADEMGMGKTLQTITLMLANRKDAGDGMKSKATLVVCPLVAVHQWKFEIAKCTTPDALRVGVFHGADRPDSFEELTGDFDVILTTYSIVEADYRRQHNGFLRKGEKVYRTSLLHSVHWHRIVLDEAHFIKDRSCATARSVFALEADYRWSLTGTPLQNRVGELYSLVRFLRLTPFSHYYCKLCPCKSLNWKFVGRGCQSCGHRSTSHFSWWNRNVLNPIMRNGGFGPGERAMQVLQMILQRIMLRRTKTERAADLKLPPRVVRFCRRALDSEENDFYEALYTQSRTHFMGYVSAGSILNNYAHVFDLLLRLRQSVDHPFLVIHNPNKKGSETDAVAVGARMGNAHVCGLCFDPSDDAIASACGHAFCRLCVGSYIGTVSAGGQVPECPTCRLRLTIDMEQPPLPPPVVASDDTAAQPEKDVDYSPFGTSGRAVAKPMGGVKASILSRIDLSAWRSSTKIEALLEELNDMRTRDPNAKSLVFSQFVNFLDLVEWRLKLAGFKSSKLDGRMNATQKAHAIRQFNEDPETTVFLISLKAGGVALNLTVASYCMVLDPWWNGAVEQQAIDRIHRLGQYRPITVVRFITRDTIEERILNLQTKKQFLFDMTVGGNTDAMARLSVDDLKYLFV* # ORIGINAL: g10157.t1 original gene structure, not modified by PASA NODE_487_length_22712_cov_40.065 AUGUSTUS gene 9624 9977 . + . ID=g10157;Name=g10157.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS mRNA 9624 9977 . + . ID=g10157.t1;Parent=g10157;Name=g10157.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS exon 9624 9977 . + . ID=g10157.t1.exon1;Parent=g10157.t1 NODE_487_length_22712_cov_40.065 AUGUSTUS CDS 9624 9977 . + 0 ID=cds.g10157.t1;Parent=g10157.t1 #PROT g10157.t1 g10157 MSSIIDLPSAILWAPAEVLHEVIDKEILKFDTERARVRAIEDELYGAMGLEMVSDEDSDDDEDYIGGVEDDSDNGDGGAGEFDDGGYGYAEEDDDDEEEEEEEEEDDDVEEEDDEED* # ORIGINAL: g4737.t1 original gene structure, not modified by PASA NODE_4483_length_1558_cov_32.5691 AUGUSTUS gene 170 1052 . + . ID=g4737;Name=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS mRNA 170 1052 . + . ID=g4737.t1;Parent=g4737;Name=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS exon 170 386 . + . ID=g4737.t1.exon1;Parent=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS CDS 170 386 . + 1 ID=cds.g4737.t1;Parent=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS exon 546 703 . + . ID=g4737.t1.exon2;Parent=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS CDS 546 703 . + 0 ID=cds.g4737.t1;Parent=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS exon 911 1052 . + . ID=g4737.t1.exon3;Parent=g4737.t1 NODE_4483_length_1558_cov_32.5691 AUGUSTUS CDS 911 1052 . + 1 ID=cds.g4737.t1;Parent=g4737.t1 #PROT g4737.t1 g4737 ARDKQNALVRKLLHYQHYLERVLETSEEFSEVREIIARYDTLVATNEDLLARQRRNQDENERKRAELNKFTEEKNNEILNYNNRLANLQKTFEETQMRALKWEAEWNHILNTAAKKTLLLGQIKMATHNLFSLVNRHLKMRLGACKTIEQLERIQEFVEDLSQITESASLE* # ORIGINAL: g8240.t1 original gene structure, not modified by PASA NODE_2920_length_4735_cov_41.718 AUGUSTUS gene 211 3416 . - . ID=g8240;Name=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS mRNA 211 3416 . - . ID=g8240.t1;Parent=g8240;Name=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 3300 3416 . - . ID=g8240.t1.exon1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 3300 3416 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 2958 3173 . - . ID=g8240.t1.exon2;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 2958 3173 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 1829 1938 . - . ID=g8240.t1.exon3;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 1829 1938 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 1443 1578 . - . ID=g8240.t1.exon4;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 1443 1578 . - 1 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 1029 1208 . - . ID=g8240.t1.exon5;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 1029 1208 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 588 809 . - . ID=g8240.t1.exon6;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 588 809 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS exon 211 363 . - . ID=g8240.t1.exon7;Parent=g8240.t1 NODE_2920_length_4735_cov_41.718 AUGUSTUS CDS 211 363 . - 0 ID=cds.g8240.t1;Parent=g8240.t1 #PROT g8240.t1 g8240 MPGIESVGASDARHVDAMASAPSRTPCFNKDDFVKREFDVDEFVADCRRRVPLETLRVDLREYLRVLKHELVELINKDYADFVNLSSNLVGMDKTIADIRLPMVKIKDEVLAVLHLFLNVASSVEKIEKLIVKMNSAQLHPSGGSQDKSLAGTGNAQEDSTTHLIERVAGEFNQLQFYVSQGRDLPFVRAIHPRISTIADTLQAGLQSSFKSGLDSLNTETLRQCLRTYALIDRTTEAEQLYRAWIVAPFMKQTVTERAATRELDSMLRAVLRFVSTNCASVASIASAANIRGFDFVVRSVWPEFVQCVSVNAPGLFAAGLADQFHKNYTSVFAFVGEYELLCGSAESVVHLRSHPSFAEFTKRWSLPVYFQLRWGG* # ORIGINAL: g781.t1 original gene structure, not modified by PASA NODE_2461_length_6189_cov_41.1408 AUGUSTUS gene 3804 5792 . + . ID=g781;Name=g781.t1 NODE_2461_length_6189_cov_41.1408 AUGUSTUS mRNA 3804 5792 . + . ID=g781.t1;Parent=g781;Name=g781.t1 NODE_2461_length_6189_cov_41.1408 AUGUSTUS exon 3804 5792 . + . ID=g781.t1.exon1;Parent=g781.t1 NODE_2461_length_6189_cov_41.1408 AUGUSTUS CDS 3804 5792 . + 0 ID=cds.g781.t1;Parent=g781.t1 #PROT g781.t1 g781 MRMAKPEACWYITRRLPRMSWLIVASTLAATAILAIGGWPWTSLSGTQSTADGATTAPIVGVQPQFVQFEAHMPPSAMPVPSTVVPKPTSSANADHFQVDGDAYTPPPPSKWITAWRDAFAFCQTMSLCITNGTTDPTQTHFIGLDRYKDGHITVSEGDVIEFGIRARDANGHARLCGGDSFQVELRGPSLVVGHAIDNLDGVYSFRATLFDAGEYTVHARLDFRHCVGLTECHVNNTKEILIAWIGKPVSESTEDAPTIIVKKASRPISQSRDPATCGLAYSASQSYDDPSLRIGRWRPSASACTDLLFRSFPSNVLKCATPAPFLWHALLNRPFMPVRSLRNVWIHMIGDSLTRNVQYFFEKFLPSQLAGPFRHKCYRLLGTPPPNATLPIVADDLCRTGRTAAGLPHYLEFLRVLTFPSVNVTITYLTFNEYFEEESQHYAPPHRGTFTPWTDAVLLSTMAASESPSSESPSESQSTPPSVSLVSDSLPSRADPPPGGLGAAVRKFDSVLSRDKSTVPSHVILNAGLHYLHPVSMLKSHSAFLAAVLARAREDFPSPRTRLLWRSTTQTQFQRQSLPSEHRCKTPYRVALVNEIAAEIVAREGIPVVDYLQFSLGRADAAPDNRHYKQSVQDEIVSEMLNVIGECDPDAPASDMAIPQY* # PASA_UPDATE: g780.t1, single gene model update, valid-1, status:[pasa:asmbl_4366,status:13],[pasa:asmbl_4367,status:12], valid-1 NODE_2461_length_6189_cov_41.1408 . gene 97 2917 . - . ID=g780;Name=g780.t1 NODE_2461_length_6189_cov_41.1408 . mRNA 97 2917 . - . ID=g780.t1;Parent=g780;Name=g780.t1 NODE_2461_length_6189_cov_41.1408 . exon 97 2917 . - . ID=g780.t1.exon1;Parent=g780.t1 NODE_2461_length_6189_cov_41.1408 . CDS 983 2917 . - 0 ID=cds.g780.t1;Parent=g780.t1 NODE_2461_length_6189_cov_41.1408 . three_prime_UTR 97 982 . - . ID=g780.t1.utr3p1;Parent=g780.t1 #PROT g780.t1 g780 MAVAAPWLGRRRLLTLFAFVILGGVVAIFAVPHALDLFYTAQVATILSASARSGAWTRSEGVAPAPSTVLDALHSVNGSTEWYSCFHGWGRVCPHTGPRDVVIGAAFGLKGEYSIQRFLTSLRRVNEKAAVIILVHENVDESMRNLAARFDAHLHIVLKSTYADGEFTFVQYRFFEEAAALKSVSSWARNVFHADVTDTYFQSDPFAVFDDAASASDYNALLAFLEDDTAVRIGNCPNHEKWIRKCYGEDVWNLIGSFARACAGSIIAPYPIYMEFLAFLNSEMLSNGCNDQGVFNVLLWTNQLSRRFPVRTFPSDDGIVYTLSVPRIIVDASGMVLNARREIPPAVHQTARHKVIEEVSRLLFPDRPADVASLHRAHLQLGVIPSYIPAVTIATMIVDNAVNFGRMSGGRKPVSSEAEHAAAVSTALKKLALLHNPMVFFVEPKYAHLVVEARRHSGMLKRTRIVNITMGGLAFRGPIATGKSEGRATSAGVVPASLSKVALLERVVLENPFATDHFGWIDSDIPPSAWGADLFPARDRVFVLPRGRVRFVVTGMEPSLSVRFAKSASDINNADMPGHLGAVFAGHRLGLLNMFSRFNATIDEALSRVGLFIDGQTIFSLLFGYYPESLDISVVKEYELLRGF* # ORIGINAL: g9503.t1 original gene structure, not modified by PASA NODE_2772_length_5163_cov_37.225 AUGUSTUS gene 1232 4999 . + . ID=g9503;Name=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS mRNA 1232 4999 . + . ID=g9503.t1;Parent=g9503;Name=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 1232 1303 . + . ID=g9503.t1.exon1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 1232 1303 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 1651 1723 . + . ID=g9503.t1.exon2;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 1651 1723 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 1927 2087 . + . ID=g9503.t1.exon3;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 1927 2087 . + 2 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 2407 2514 . + . ID=g9503.t1.exon4;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 2407 2514 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 2810 2892 . + . ID=g9503.t1.exon5;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 2810 2892 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 3249 3271 . + . ID=g9503.t1.exon6;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 3249 3271 . + 1 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 3596 3662 . + . ID=g9503.t1.exon7;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 3596 3662 . + 2 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 3877 4156 . + . ID=g9503.t1.exon8;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 3877 4156 . + 1 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 4447 4641 . + . ID=g9503.t1.exon9;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 4447 4641 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS exon 4892 4999 . + . ID=g9503.t1.exon10;Parent=g9503.t1 NODE_2772_length_5163_cov_37.225 AUGUSTUS CDS 4892 4999 . + 0 ID=cds.g9503.t1;Parent=g9503.t1 #PROT g9503.t1 g9503 MFAESITGFEIEARENPADAFLDLIHEQNVIALANKDNSPKTYGTAGEDNTSSQLSVNGAYSKICVDLPRAYLDSNLCSNNNAALAHYLPSTGLSEEAIRASRGKVPPYATSFAHQVVIVAKRAVLKIVRNPATSVLQVFVNIFFALIVGLIYLRLGDDQRGLQNRIGAFFFIVMNIIFGNLSAIEIFIRERPVFLHEKTSGYYRTSAYFLATVICDVIPLRLIPVTAFTVVTYWMIGLRAGAAHFFTYYATLLLTSLTAGALCYAISASVYIFAIANLLVALCYVVFMVFGGLLINLSSIPSFLAWIKYLSIFRYSLETLAVNELLDAEFTCLPSERLSSGDCPDGNGYLASQHFHADNVTPDLLALTAMFCGYILLAYIQMRRLKKQ* # ORIGINAL: g414.t1 original gene structure, not modified by PASA NODE_2406_length_6397_cov_78.2873 AUGUSTUS gene 301 2004 . + . ID=g414;Name=g414.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS mRNA 301 2004 . + . ID=g414.t1;Parent=g414;Name=g414.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 301 2004 . + . ID=g414.t1.exon1;Parent=g414.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 301 2004 . + 0 ID=cds.g414.t1;Parent=g414.t1 #PROT g414.t1 g414 MVCRFLADQATAPGADQDAALEQALMWINLVRSQGVPLMREDLSHLFSAFAPAVAIEAPNGQGREAKGSKDVSSGEFDRQLAIVERIVGAVDVHSSKDAVAAVDEALSQLAILHVRAHNMPAARRLETLLVMCGGQPTWQYLRTAVSEGMRSAILRSRSRSRATETAGEAAELDALLANLQALAACATAEKGIITTLATLPTPVSWDTAVDALLHDGAPLFRVVAMADLLPAGVHIHGAVTHLVGSACRLHGFDGGLTVLSRLHARGFTTEPASYQPLATLAKNTDQLELVMSMLDDTRSAIAKKLNAKRNAQSYPGNNVSDGPGTDLSSHSESGVRHVRKEVVQLPANVTSPLLLSLTSACQRLRAVSAAARVARIIHDDGIAIDLRAATALVSLLRTSNSPEHADAVSWVVSNATSIDAVLVRLTLVSFLRCGRADLGPPVVLRCLRLKTPLRDRELQMASELIFQLMPPFGSASTPGGASDSTSYLTCVDIYNSAVANGVTCLPDVAANAVTVLVRAGALAEAHRIYNQFLTPSEQSRVHSAAVAQIEAAQLSSAPTVHSPTEF* # ORIGINAL: g415.t1 original gene structure, not modified by PASA NODE_2406_length_6397_cov_78.2873 AUGUSTUS gene 3224 5594 . - . ID=g415;Name=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS mRNA 3224 5594 . - . ID=g415.t1;Parent=g415;Name=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 5463 5594 . - . ID=g415.t1.exon1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 5463 5594 . - 0 ID=cds.g415.t1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 4975 5078 . - . ID=g415.t1.exon2;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 4975 5078 . - 0 ID=cds.g415.t1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 4496 4590 . - . ID=g415.t1.exon3;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 4496 4590 . - 1 ID=cds.g415.t1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 4023 4164 . - . ID=g415.t1.exon4;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 4023 4164 . - 2 ID=cds.g415.t1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 3624 3703 . - . ID=g415.t1.exon5;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 3624 3703 . - 1 ID=cds.g415.t1;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS exon 3224 3270 . - . ID=g415.t1.exon6;Parent=g415.t1 NODE_2406_length_6397_cov_78.2873 AUGUSTUS CDS 3224 3270 . - 2 ID=cds.g415.t1;Parent=g415.t1 #PROT g415.t1 g415 MHPYHQHDQSAPLSEESPLKPTNPYAASKAAAECIVMSYWKSFKFPVIVTRGSNVYGPHQYPEKIVPKFISRLLAGRACPLHGEGATVRNYLYISDAVSAFLRILVDGVDGEAYNIGCDVSMTTLDVARSVVCHVKGEAADPSTWVEYVDDRPLNDHSYPMDFSKVAALGWRPSVTWEDGLARTVLWYRTHPNHWVGLD* # ORIGINAL: g3230.t1 original gene structure, not modified by PASA NODE_2024_length_8049_cov_40.4915 AUGUSTUS gene 2447 6125 . - . ID=g3230;Name=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS mRNA 2447 6125 . - . ID=g3230.t1;Parent=g3230;Name=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS exon 5976 6125 . - . ID=g3230.t1.exon1;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS CDS 5976 6125 . - 0 ID=cds.g3230.t1;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS exon 4494 4949 . - . ID=g3230.t1.exon2;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS CDS 4494 4949 . - 0 ID=cds.g3230.t1;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS exon 3885 3948 . - . ID=g3230.t1.exon3;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS CDS 3885 3948 . - 0 ID=cds.g3230.t1;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS exon 2789 3224 . - . ID=g3230.t1.exon4;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS CDS 2789 3224 . - 2 ID=cds.g3230.t1;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS exon 2447 2603 . - . ID=g3230.t1.exon5;Parent=g3230.t1 NODE_2024_length_8049_cov_40.4915 AUGUSTUS CDS 2447 2603 . - 1 ID=cds.g3230.t1;Parent=g3230.t1 #PROT g3230.t1 g3230 MSSTTPHMDAVLKAHGLSTRCASQLSPSNGRAQICVVAERDFKPGDIVLRWRSFHRSECPALQSFSVEDSSIPDVARDEIMLAIRILIKKHLELQQQQQQQQQQPQQQPQQQPQQQPQQQPQQQPQPQQQPQLSKANALDCSYEDFAWLMSHVEALRSGDVNDVRWQSCIAVAREIVKRMDACKDVPVPTEDEACDLLCRMQANDFGVWNGLVVSVAAGVYPVGDEVCHSYLDLALPLQERRIRLRDIYSFNCACNACVRTSTEHKEEPTSTFTDRDLHELDTAAQLHASGASLLLSPEQSRAALSSALAVRRRLLPGRHHDIIASAAALIPLLVEACDYASAVDVCRVVVDAYAAIYGEIHPMVGLQWYTLGDLHGRRNATAEARRCHTKAYNIMLKTHGKEDPMVEALSDLLGIRQRL* # PASA_UPDATE: g3231.t1, single gene model update, valid-1, status:[pasa:asmbl_3300,status:12], valid-1 NODE_2024_length_8049_cov_40.4915 . gene 6581 7961 . + . ID=g3231;Name=g3231.t1 NODE_2024_length_8049_cov_40.4915 . mRNA 6581 7961 . + . ID=g3231.t1;Parent=g3231;Name=g3231.t1 NODE_2024_length_8049_cov_40.4915 . five_prime_UTR 6581 6727 . + . ID=g3231.t1.utr5p1;Parent=g3231.t1 NODE_2024_length_8049_cov_40.4915 . exon 6581 7299 . + . ID=g3231.t1.exon1;Parent=g3231.t1 NODE_2024_length_8049_cov_40.4915 . CDS 6728 7299 . + 0 ID=cds.g3231.t1;Parent=g3231.t1 NODE_2024_length_8049_cov_40.4915 . exon 7757 7961 . + . ID=g3231.t1.exon2;Parent=g3231.t1 NODE_2024_length_8049_cov_40.4915 . CDS 7757 7961 . + 1 ID=cds.g3231.t1;Parent=g3231.t1 #PROT g3231.t1 g3231 MVYTRLSTHARSRECGSRALGAVSAACGRSSLPIASRVAVAAPSRLMATEASKPLAAWGPSGPLASASAWRLNEIKGGLHKAASSLLTASRMGLNNIGSSVARRGSLVQPAPTRKMSTVATKVIPRLPVPELQETCDRYLRYVRPLVNDAQMEKTKAAVAEFLNGDGPELHNVVVKLANPDAENEKKYPFSYIEKFWDDMYLNGRWALPINSNPFFLLRPDTKRTNIADRAASLIEATTRFHMKIHAGLLETDKAGDT* # PASA_UPDATE: g3229.t1, single gene model update, valid-1, status:[pasa:asmbl_3299,status:12], valid-1 NODE_2024_length_8049_cov_40.4915 . gene 36 1556 . + . ID=g3229;Name=g3229.t1 NODE_2024_length_8049_cov_40.4915 . mRNA 36 1556 . + . ID=g3229.t1;Parent=g3229;Name=g3229.t1 NODE_2024_length_8049_cov_40.4915 . five_prime_UTR 36 36 . + . ID=g3229.t1.utr5p1;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . exon 36 152 . + . ID=g3229.t1.exon1;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . CDS 37 152 . + 0 ID=cds.g3229.t1;Parent=g3229.t1;5_prime_partial=true NODE_2024_length_8049_cov_40.4915 . exon 571 712 . + . ID=g3229.t1.exon2;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . CDS 571 712 . + 1 ID=cds.g3229.t1;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . exon 908 982 . + . ID=g3229.t1.exon3;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . CDS 908 982 . + 0 ID=cds.g3229.t1;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . exon 1407 1556 . + . ID=g3229.t1.exon4;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . CDS 1407 1502 . + 0 ID=cds.g3229.t1;Parent=g3229.t1 NODE_2024_length_8049_cov_40.4915 . three_prime_UTR 1503 1556 . + . ID=g3229.t1.utr3p1;Parent=g3229.t1 #PROT g3229.t1 g3229 QISEACLATRSRNGGLMDIDDLQKRLTRMRGKNAQSISTDDIERAIRKLKVLGSGFDIVTVASRKLVQSLPFELNMDHSTVLTLAEGKGYVTATNVRVELLWESERVDAVLGHMLKEGIAWVDDQAGERQYWFPGLVHGVSE* # PASA_UPDATE: g12518.t1, single gene model update, valid-1, status:[pasa:asmbl_8041,status:12], valid-1 NODE_539_length_21568_cov_47.6936 . gene 311 948 . - . ID=g12518;Name=g12518.t1 NODE_539_length_21568_cov_47.6936 . mRNA 311 948 . - . ID=g12518.t1;Parent=g12518;Name=g12518.t1 NODE_539_length_21568_cov_47.6936 . five_prime_UTR 915 948 . - . ID=g12518.t1.utr5p1;Parent=g12518.t1 NODE_539_length_21568_cov_47.6936 . exon 714 948 . - . ID=g12518.t1.exon1;Parent=g12518.t1 NODE_539_length_21568_cov_47.6936 . CDS 714 914 . - 0 ID=cds.g12518.t1;Parent=g12518.t1 NODE_539_length_21568_cov_47.6936 . exon 311 461 . - . ID=g12518.t1.exon2;Parent=g12518.t1 NODE_539_length_21568_cov_47.6936 . CDS 311 461 . - 0 ID=cds.g12518.t1;Parent=g12518.t1;3_prime_partial=true #PROT g12518.t1 g12518 MKVRENPKKGFYVENLTIVPVNSYAEIEKRIAEGTLNRTVAATQMNATSSRAHTIVSINFAQKNKNDQGQEMQKVSNINLVDLAGSERADSTGATGDRLKEGSAINQSLSTLGNVIA # ORIGINAL: g12522.t1 original gene structure, not modified by PASA NODE_539_length_21568_cov_47.6936 AUGUSTUS gene 19041 20708 . - . ID=g12522;Name=g12522.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS mRNA 19041 20708 . - . ID=g12522.t1;Parent=g12522;Name=g12522.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS exon 19041 20708 . - . ID=g12522.t1.exon1;Parent=g12522.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS CDS 19041 20708 . - 0 ID=cds.g12522.t1;Parent=g12522.t1 #PROT g12522.t1 g12522 MSDVVAIGFNSLAPETVVHHIVPYLSNVDVSSLAKVNRALHVHLRQTRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVLDGCDRGEANPQLEAFAGVYSASVDRNPVLPDMAPLREVRELVVWPFCLDVSLFVNLQRLVVHSGSIVNATLLSRVSVIELTSVELDSLEFVNVKRVKLVSCGLPGRVDITDVSGLRNVRFVTLERMDSLVDVSPLANAIEVTLERCDKVSWASLLTLGGVKKLFYRPSPSCYNSSPYSAPNAIPIEFANLHTLEMTNTSIVDVTQLGRIHTLTMFNRCGGVEMGNDFLEKLGSVHTLSLRGFLFSEKNPEMHFLGNIHSLDLSHSNVSDVSCLGRVHTLSLVGCDLVEDASALGNVHTLNLSETGVVDVSALGRCYALNLSSLNVYDVSMLGHVHTLDLSYTKVADASSLGNVHILKLSRTLVKDVSMLGHVHELHLDQCRHIENVDALGRVHLLDLSHCPVSDVSALGHVHTLLLRSCWNVSDVSGLGKVFYLDLSRCFRVTDFSPVATVPVLVLKSLQFDRSVLSGVRCLKL* # PASA_UPDATE: g12519.t1, single gene model update, valid-1, status:[pasa:asmbl_8043,status:3], valid-1 # PASA_UPDATE: g12519.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8044,status:3], valid-1 NODE_539_length_21568_cov_47.6936 . gene 2457 11374 . + . ID=g12519;Name=g12519.t1 NODE_539_length_21568_cov_47.6936 . mRNA 2457 11374 . + . ID=g12519.t1;Parent=g12519;Name=g12519.t1 NODE_539_length_21568_cov_47.6936 . five_prime_UTR 2457 2638 . + . ID=g12519.t1.utr5p1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 2457 3227 . + . ID=g12519.t1.exon1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 2639 3227 . + 0 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 4045 4491 . + . ID=g12519.t1.exon2;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 4045 4491 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 4759 5151 . + . ID=g12519.t1.exon3;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 4759 5151 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 5377 5751 . + . ID=g12519.t1.exon4;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 5377 5751 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 6075 6425 . + . ID=g12519.t1.exon5;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 6075 6425 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 6854 6948 . + . ID=g12519.t1.exon6;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 6854 6948 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 7297 7377 . + . ID=g12519.t1.exon7;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 7297 7377 . + 0 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 7724 7898 . + . ID=g12519.t1.exon8;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 7724 7898 . + 0 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 8183 8361 . + . ID=g12519.t1.exon9;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 8183 8361 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 8671 8872 . + . ID=g12519.t1.exon10;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 8671 8872 . + 0 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 8991 9314 . + . ID=g12519.t1.exon11;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 8991 9314 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 9501 9705 . + . ID=g12519.t1.exon12;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 9501 9705 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 10108 10256 . + . ID=g12519.t1.exon13;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 10108 10256 . + 1 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 10767 10897 . + . ID=g12519.t1.exon14;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 10767 10897 . + 2 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . exon 11090 11374 . + . ID=g12519.t1.exon15;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . CDS 11090 11137 . + 0 ID=cds.g12519.t1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . three_prime_UTR 11138 11374 . + . ID=g12519.t1.utr3p1;Parent=g12519.t1 NODE_539_length_21568_cov_47.6936 . mRNA 2457 11374 . + . ID=g12519.t1.1.5b6be70c;Parent=g12519;Name=g12519.t1 NODE_539_length_21568_cov_47.6936 . five_prime_UTR 2457 3227 . + . ID=g12519.t1.1.5b6be70c.utr5p1;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . five_prime_UTR 4045 4853 . + . ID=g12519.t1.1.5b6be70c.utr5p2;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 2457 3227 . + . ID=g12519.t1.1.5b6be70c.exon1;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 4045 5151 . + . ID=g12519.t1.1.5b6be70c.exon2;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 4854 5151 . + 0 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 5377 5751 . + . ID=g12519.t1.1.5b6be70c.exon3;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 5377 5751 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 6075 6425 . + . ID=g12519.t1.1.5b6be70c.exon4;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 6075 6425 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 6854 6948 . + . ID=g12519.t1.1.5b6be70c.exon5;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 6854 6948 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 7297 7377 . + . ID=g12519.t1.1.5b6be70c.exon6;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 7297 7377 . + 0 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 7724 7898 . + . ID=g12519.t1.1.5b6be70c.exon7;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 7724 7898 . + 0 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 8183 8361 . + . ID=g12519.t1.1.5b6be70c.exon8;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 8183 8361 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 8671 8872 . + . ID=g12519.t1.1.5b6be70c.exon9;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 8671 8872 . + 0 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 8991 9314 . + . ID=g12519.t1.1.5b6be70c.exon10;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 8991 9314 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 9501 9705 . + . ID=g12519.t1.1.5b6be70c.exon11;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 9501 9705 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 10108 10256 . + . ID=g12519.t1.1.5b6be70c.exon12;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 10108 10256 . + 1 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 10767 10897 . + . ID=g12519.t1.1.5b6be70c.exon13;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 10767 10897 . + 2 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . exon 11090 11374 . + . ID=g12519.t1.1.5b6be70c.exon14;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . CDS 11090 11137 . + 0 ID=cds.g12519.t1.1.5b6be70c;Parent=g12519.t1.1.5b6be70c NODE_539_length_21568_cov_47.6936 . three_prime_UTR 11138 11374 . + . ID=g12519.t1.1.5b6be70c.utr3p1;Parent=g12519.t1.1.5b6be70c #PROT g12519.t1 g12519 MKMRPSATPHRVAHRIGANPNARAVFMTMTLGTLAVFASIACVALADQPAAPVTFVFESMPAVQRCPVPGRTVFSEVTVGVRLSAWFNQDGTGDGTPVDNSPPRVSVSYDVGLQDAVRAALFVRNPGLPPPYYAPPPVFDASNWATPQPLVVGLTLLCQTASFSRGGDTVGLVISFDYNTPQELVTAAILPITIKPDITVPFLLPITLGESMLLCRPGGTADLKLQLWLPDGVVIPPQNAATINATTVRTTGLEQSQKFDLGLIDPADGVAKWSVLLALLQDDFDETTGVYVLRIRCTPRPAFDALWDTPSEAFVLRSASGFPLKIMGPSGDLTASSLFFVTMRSPNTVIVTPSAGVRCTPGTAVSFSLRLAKPQLDMFHASGYELRIVSSDPSIALISDRFENYFPAADAVLSLPSNPRETFRTHSQEATVTCLAEGIATFKIGSTLDDPRRTRPPGLSESADPLAPVEVTVVVSDSFASSPSVQFVPLGSRLCLQRNLINYTATAVVLVEARTATGEPADATFDIQFADEIEVRLASSRRVSFHRAGDGVPTSLIILPGALYDFESSGTIYFIPVNSGASNATATAPGVTSSVSFPIFKAPGLTYSFKVPAVFVGGSTTVDIRLDKLGLPYGYDTSCLMPTAVGGFVFGAGTLLDDATGEPVETGSRRVLIDSPMTGPHTFGVVKCVEKGIVRVSLGTAFGLPISSEFRADTLDCIDYFYLDAVPNSVTCKIGESVTVDLVIANRELQNAYFVDMRSTVSVAQAHGVIALTGRREFFTEAETLSYARQDERKDFLTFRCEAAGNAVIRLNTSFQFMLSDVNAPVDEITVTVIAAPYELPSIVLSPTEAVIQDFGYRGRPEDDVVVSISLDRAPSRPLSIRAVLPAAVVHSELKVVPGSAEAFLFTANDFNVSQTFRFRAQFVEGPWSSVIAFICSDSADSNAESSGVNVQPALMRTRIVQTPRVGMLSEDLDNVFKGPTCSAGGTIDIPIGVVTGNMYDDALTFETYTFSERITVESSTFELKKNVPSTYVAINCIAMSLYDPFEIPTVNYYNTLRGISGRFMVTVVEEAPLAVNPQHVTCEEGDIRTVEVATPNMYPTLWLDGLDAHILEVTLGAPDAGVVEVSTPLVTWNPPAEPSNPFATITFKCLRKGPAVLAIRDHPSMLVAGKRTGLHFNAASLTVDVMSRMPCKRMPCVEGTNCVETDVATSESGFLCLTPTEMYKYGMGKWKATFNAWNTGDDCRKN* #PROT g12519.t1.1.5b6be70c g12519 MFHASGYELRIVSSDPSIALISDRFENYFPAADAVLSLPSNPRETFRTHSQEATVTCLAEGIATFKIGSTLDDPRRTRPPGLSESADPLAPVEVTVVVSDSFASSPSVQFVPLGSRLCLQRNLINYTATAVVLVEARTATGEPADATFDIQFADEIEVRLASSRRVSFHRAGDGVPTSLIILPGALYDFESSGTIYFIPVNSGASNATATAPGVTSSVSFPIFKAPGLTYSFKVPAVFVGGSTTVDIRLDKLGLPYGYDTSCLMPTAVGGFVFGAGTLLDDATGEPVETGSRRVLIDSPMTGPHTFGVVKCVEKGIVRVSLGTAFGLPISSEFRADTLDCIDYFYLDAVPNSVTCKIGESVTVDLVIANRELQNAYFVDMRSTVSVAQAHGVIALTGRREFFTEAETLSYARQDERKDFLTFRCEAAGNAVIRLNTSFQFMLSDVNAPVDEITVTVIAAPYELPSIVLSPTEAVIQDFGYRGRPEDDVVVSISLDRAPSRPLSIRAVLPAAVVHSELKVVPGSAEAFLFTANDFNVSQTFRFRAQFVEGPWSSVIAFICSDSADSNAESSGVNVQPALMRTRIVQTPRVGMLSEDLDNVFKGPTCSAGGTIDIPIGVVTGNMYDDALTFETYTFSERITVESSTFELKKNVPSTYVAINCIAMSLYDPFEIPTVNYYNTLRGISGRFMVTVVEEAPLAVNPQHVTCEEGDIRTVEVATPNMYPTLWLDGLDAHILEVTLGAPDAGVVEVSTPLVTWNPPAEPSNPFATITFKCLRKGPAVLAIRDHPSMLVAGKRTGLHFNAASLTVDVMSRMPCKRMPCVEGTNCVETDVATSESGFLCLTPTEMYKYGMGKWKATFNAWNTGDDCRKN* # ORIGINAL: g12520.t1 original gene structure, not modified by PASA NODE_539_length_21568_cov_47.6936 AUGUSTUS gene 11763 14930 . - . ID=g12520;Name=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS mRNA 11763 14930 . - . ID=g12520.t1;Parent=g12520;Name=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS exon 14529 14930 . - . ID=g12520.t1.exon1;Parent=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS CDS 14529 14930 . - 0 ID=cds.g12520.t1;Parent=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS exon 12210 14401 . - . ID=g12520.t1.exon2;Parent=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS CDS 12210 14401 . - 0 ID=cds.g12520.t1;Parent=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS exon 11763 12042 . - . ID=g12520.t1.exon3;Parent=g12520.t1 NODE_539_length_21568_cov_47.6936 AUGUSTUS CDS 11763 12042 . - 1 ID=cds.g12520.t1;Parent=g12520.t1 #PROT g12520.t1 g12520 MSADINFLEPLKHDVVFLRGLLLAAIGGPASSADAAARAEAQDLLGSLESILDASKRYSKTREPKDFDAIAERVASLSMRRSLDVARAFHEFLNLANVAERHHRVRRWRAFLRGEGDIRLHHTLYDCFQTVLDKGFTVKQAREALIRQRVEFVLTAHPTQAARRTVRTKYTEIASLLDRRDRSVLTPDEMTELVNDIRREVASCWGTNTIRQIKPTPEDEARDGLDTLVRNLWNAIPTHMRAIDAALAKHGAAPLPLDAAPVTFGSWMGGDRDGNPFVTPAVTRTVCLLSRWKAADLYYDGIDRLLFELSMGQCTDELRREASGITAAETADKRHWSFEHGNIPTDEPYRLVLSRVRDRMLLTRKWFEDALARESRRGSGGAAGAAQSQGDLHPPAHIYTHAEQVIAPLALCHRSLCACGYDLVANGRLLDLLRRLACFGLTLTRLDIRQESDRHAETLDAVTRYVGIGSYLEWTEDARIEFLARELSGRRPLVPRSFDALAACGGDADAATRVSDCIETFRAAAEIGPEPLGAYVISMAHSVSDVLAVCLLQKEGGSPAGAMMRVVPLFETAADLRNAPEVMRRLLSVAWYKAHIGGRQEVMIGYSDSAKDAGRLTSAWELYHAQEELVRVSREHGVVITLFHGRGGSVGRGGGPQHLAVLSQPPGSLAGGLRVTIQGESMEQHFEGAFTSEQTLERYTTATLLSSLDPPVPPKADWRHIMEQLSINSCAEYRHVVYETPSFVPYFRAATPEKSLGSLMIGSRPSRRKEDGGIETLRAIPWIFSWTQNRLHLPVWLGVGGALETALAQPGGEATLRAMYKEWPFFQSTMDLIEMVLAKMDLLIAAKYDESLVPPELASVGVELRARASRTVTAVLRVTGNTTLLQGNPVIRRAIDARAPYVDPLNLLQVVALATAKKVAHDGSKGADNAKDEISEMAHRTLLVTIQGVAAGMQNTG* # PASA_UPDATE: g12521.t1, single gene model update, valid-1, status:[pasa:asmbl_8040,status:12], valid-1 NODE_539_length_21568_cov_47.6936 . gene 15449 17192 . + . ID=g12521;Name=g12521.t1 NODE_539_length_21568_cov_47.6936 . mRNA 15449 17192 . + . ID=g12521.t1;Parent=g12521;Name=g12521.t1 NODE_539_length_21568_cov_47.6936 . exon 15449 16306 . + . ID=g12521.t1.exon1;Parent=g12521.t1 NODE_539_length_21568_cov_47.6936 . CDS 15449 16306 . + 0 ID=cds.g12521.t1;Parent=g12521.t1 NODE_539_length_21568_cov_47.6936 . exon 16501 17192 . + . ID=g12521.t1.exon2;Parent=g12521.t1 NODE_539_length_21568_cov_47.6936 . CDS 16501 17058 . + 0 ID=cds.g12521.t1;Parent=g12521.t1 NODE_539_length_21568_cov_47.6936 . three_prime_UTR 17059 17192 . + . ID=g12521.t1.utr3p1;Parent=g12521.t1 #PROT g12521.t1 g12521 MASTAPTAEPRRAHGFDYDLFVLGAGSGGVRGARIAASHGAKVAVAEEKDLGGTCVNVGCVPKKLLVYGSHIRHDMEDAAAYGWSVTHSELDWPRLIDNKNKEILRLNGIYERLLLNAGVTVLNGRASLVDAHTIRVGDATVTADKVLIATGSWPQRPPFPGVEHTITSNDVFHLQHLPRRVVIFGAGYIAVEFASIFKGFGALHVDVVFRGDEILRGFDHDVRKFLHSELVKSGISLRPKIVITSVVKGSDGLHVTLSDGTELSADVVLVATGRVPNVAGLHLGQVGVECDAVGAIKVDEWGRTNIPNIFAVGDVTNRINLTPVALHEAHCFADTEFGGRRRSPSHDLVPSAVFTSPPVGTVGMTEEQAVLQFGASNVRVYRSDFKPMKHTMTGRDTRILMKLVVEAASDRVVGVHMVGEEAGEIVQGLAVALKAGATKATFDSTIGIHPTAAEEFVTMRTPSVSTLPSA* # PASA_UPDATE: g8080.t1, single gene model update, valid-1, status:[pasa:asmbl_6118,status:12], valid-1 NODE_3485_length_3363_cov_40.0763 . gene 142 2039 . - . ID=g8080;Name=g8080.t1 NODE_3485_length_3363_cov_40.0763 . mRNA 142 2039 . - . ID=g8080.t1;Parent=g8080;Name=g8080.t1 NODE_3485_length_3363_cov_40.0763 . five_prime_UTR 1977 2039 . - . ID=g8080.t1.utr5p1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 1916 2039 . - . ID=g8080.t1.exon1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 1916 1976 . - 0 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 1553 1725 . - . ID=g8080.t1.exon2;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 1553 1725 . - 2 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 1288 1342 . - . ID=g8080.t1.exon3;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 1288 1342 . - 0 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 1065 1126 . - . ID=g8080.t1.exon4;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 1065 1126 . - 2 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 846 902 . - . ID=g8080.t1.exon5;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 846 902 . - 0 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 412 547 . - . ID=g8080.t1.exon6;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 412 547 . - 0 ID=cds.g8080.t1;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . exon 142 216 . - . ID=g8080.t1.exon7;Parent=g8080.t1 NODE_3485_length_3363_cov_40.0763 . CDS 142 216 . - 2 ID=cds.g8080.t1;Parent=g8080.t1;3_prime_partial=true #PROT g8080.t1 g8080 MASTSVFSPSVLRGKVAFVTGGGSGICKGMTEALMRHGCDAIIVSRTLSKLQEAAAELSSKTGRQCLALAADVRYPEQIEKALEEGHKKFGRIDIVVCGAAGNFLAPAAKLSAKAFKTVIEIDLVGAFNTCKASYKYLQETKGTIINVTMTLHYTGSPLQVHAGSAKAGIDAMSRHLATEWGRDGIRVNVIAPGPIEGTVGLDKLM # ORIGINAL: g8081.t1 original gene structure, not modified by PASA NODE_3485_length_3363_cov_40.0763 AUGUSTUS gene 2416 2891 . + . ID=g8081;Name=g8081.t1 NODE_3485_length_3363_cov_40.0763 AUGUSTUS mRNA 2416 2891 . + . ID=g8081.t1;Parent=g8081;Name=g8081.t1 NODE_3485_length_3363_cov_40.0763 AUGUSTUS exon 2416 2487 . + . ID=g8081.t1.exon1;Parent=g8081.t1 NODE_3485_length_3363_cov_40.0763 AUGUSTUS CDS 2416 2487 . + 0 ID=cds.g8081.t1;Parent=g8081.t1 NODE_3485_length_3363_cov_40.0763 AUGUSTUS exon 2745 2891 . + . ID=g8081.t1.exon2;Parent=g8081.t1 NODE_3485_length_3363_cov_40.0763 AUGUSTUS CDS 2745 2891 . + 0 ID=cds.g8081.t1;Parent=g8081.t1 #PROT g8081.t1 g8081 MAEGEGAARVVKDVLAGTAAGIAQVLVGQPFDTIKVRLQCQPVDKPIYSGFFDCVKKTVANEGAGALFKGGS* # PASA_UPDATE: g14041.t1, single gene model update, valid-1, status:[pasa:asmbl_6194,status:12], valid-1 NODE_3545_length_3236_cov_33.2891 . gene 312 3090 . + . ID=g14041;Name=g14041.t1 NODE_3545_length_3236_cov_33.2891 . mRNA 312 3090 . + . ID=g14041.t1;Parent=g14041;Name=g14041.t1 NODE_3545_length_3236_cov_33.2891 . five_prime_UTR 312 312 . + . ID=g14041.t1.utr5p1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 312 383 . + . ID=g14041.t1.exon1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 313 383 . + 0 ID=cds.g14041.t1;Parent=g14041.t1;5_prime_partial=true NODE_3545_length_3236_cov_33.2891 . exon 668 736 . + . ID=g14041.t1.exon2;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 668 736 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 1105 1176 . + . ID=g14041.t1.exon3;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 1105 1176 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 1370 1441 . + . ID=g14041.t1.exon4;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 1370 1441 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 1810 1884 . + . ID=g14041.t1.exon5;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 1810 1884 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 2069 2143 . + . ID=g14041.t1.exon6;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 2069 2143 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 2525 2596 . + . ID=g14041.t1.exon7;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 2525 2596 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . exon 3015 3090 . + . ID=g14041.t1.exon8;Parent=g14041.t1 NODE_3545_length_3236_cov_33.2891 . CDS 3015 3090 . + 1 ID=cds.g14041.t1;Parent=g14041.t1 #PROT g14041.t1 g14041 DLTNSMLENFPTDLFSGATNLRQLFLRGASISVLPIVFRDLGKLTYLDLQDNKIESLAARTFAGLASLEYLDLSGNFLNSISKATFQGITTLKTLLLRNMYIGNLPTDTFDDNKATLVELALDNAGNLGSFDPPLFTNMTSLKKLSLAQFQAEVISDHALDGLFALESLTIDSAPIGVLPDGIFDNLYNLKEL* # PASA_UPDATE: g2968.t1, single gene model update, valid-1, status:[pasa:asmbl_7807,status:12], valid-1 NODE_5019_length_1075_cov_33.936_potentialcontaminant . gene 316 750 . + . ID=g2968;Name=g2968.t1 NODE_5019_length_1075_cov_33.936_potentialcontaminant . mRNA 316 750 . + . ID=g2968.t1;Parent=g2968;Name=g2968.t1 NODE_5019_length_1075_cov_33.936_potentialcontaminant . exon 316 750 . + . ID=g2968.t1.exon1;Parent=g2968.t1 NODE_5019_length_1075_cov_33.936_potentialcontaminant . CDS 316 750 . + 0 ID=cds.g2968.t1;Parent=g2968.t1;5_prime_partial=true #PROT g2968.t1 g2968 AAAREAEAATGATPECVSSAAAAAPTVETTDVASLRKFPMWLCHSYVRPPPAAAASGAADKQPASATPKAARAEGESGHDEWERSALEQGDCDCAGVGASATAKRPAEDAQPVPKPAKKVKKEYREWWLVECVIVFGLMQGGMQ* # ORIGINAL: g3366.t1 original gene structure, not modified by PASA NODE_2633_length_5595_cov_43.6364 AUGUSTUS gene 3134 5459 . + . ID=g3366;Name=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS mRNA 3134 5459 . + . ID=g3366.t1;Parent=g3366;Name=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 3134 4333 . + . ID=g3366.t1.exon1;Parent=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 3134 4333 . + 0 ID=cds.g3366.t1;Parent=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 4452 4759 . + . ID=g3366.t1.exon2;Parent=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 4452 4759 . + 0 ID=cds.g3366.t1;Parent=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 4895 5459 . + . ID=g3366.t1.exon3;Parent=g3366.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 4895 5459 . + 1 ID=cds.g3366.t1;Parent=g3366.t1 #PROT g3366.t1 g3366 MEDEAEDSSLALETSFETNFPASKFVDWCRTTRISLGATSVDVYRTWLEAEIKLAPIVDDLSAALEDTIFPHNKFTQRRADTRGDTLHIPGLINAFITNWNYKKFMSRKTAGGKRSYSVSLALDLSLSMTAHLRSCAFDSLVAMIAALKRTSIPFSVFTFGGDCSIVKREEDGWDALAVATLLHRLRDSHYSTDVGGAVIACTDLLRSSSGRKFAFVLTDGFNSTGNRDCESMRHASATAAAAGVTVIGMGVGYDKLNVDKLFKNWIHASLPHHIPEALRALADALDAGQGSTTQDAPPRAAPPDAKLGAREIAKDNAALTELLNKIKSRVTTDDATNLEKEREFHLAEGGSNKIEVDIAFVVDVTGSMAPVLSEVRRVIQGFGKDMADAVRDKDTVHKNSGFRARPSRIGGDDLAEDSVGALKIAAEELSWRSNNKFVVLITDAPGHGAELNPDTQAFSDRLQSSARGPEVMHALRTKRIGFVFAHIRNKATAKMDRALKQWFTRLENAYNEYLKELPKLQAENDIVSVVMFDHRFRILYEGDPLANARNVQLGTPSGGGTTFHAALSTADALLTKFSTFNEDHSPQLYQKRVVWITDGEAAYASICETNLNSGRGVAVFGIAIGGHSIPMSQMVNDAMGKYIQVADVATELETVFKSIAQQSVNPALASTLAAQVGGEVARKLVSDNL* # ORIGINAL: g3365.t1 original gene structure, not modified by PASA NODE_2633_length_5595_cov_43.6364 AUGUSTUS gene 2413 3097 . + . ID=g3365;Name=g3365.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS mRNA 2413 3097 . + . ID=g3365.t1;Parent=g3365;Name=g3365.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 2413 2639 . + . ID=g3365.t1.exon1;Parent=g3365.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 2413 2639 . + 0 ID=cds.g3365.t1;Parent=g3365.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 2752 3097 . + . ID=g3365.t1.exon2;Parent=g3365.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 2752 3097 . + 1 ID=cds.g3365.t1;Parent=g3365.t1 #PROT g3365.t1 g3365 MECEFGVARFDKSVKILKGLRDAKKGSTAPTDWNNALAETVLAELAFDGGTLPDTCLMIIADTIWPRSAVPQDPNVDDADLVPHRSLAGRTGVSDIRSIAVDPMLDAAKNTGATKQTLASVISRSISERIQDCTSRAIKNMQQSPVNEEPLGKQNVWSTITDGMPSDDALKDFEGRVGRTKDPRKEGAGG* # ORIGINAL: g3364.t1 original gene structure, not modified by PASA NODE_2633_length_5595_cov_43.6364 AUGUSTUS gene 125 2314 . + . ID=g3364;Name=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS mRNA 125 2314 . + . ID=g3364.t1;Parent=g3364;Name=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 125 314 . + . ID=g3364.t1.exon1;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 125 314 . + 1 ID=cds.g3364.t1;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 422 1123 . + . ID=g3364.t1.exon2;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 422 1123 . + 0 ID=cds.g3364.t1;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 1234 1795 . + . ID=g3364.t1.exon3;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 1234 1795 . + 0 ID=cds.g3364.t1;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS exon 1920 2314 . + . ID=g3364.t1.exon4;Parent=g3364.t1 NODE_2633_length_5595_cov_43.6364 AUGUSTUS CDS 1920 2314 . + 2 ID=cds.g3364.t1;Parent=g3364.t1 #PROT g3364.t1 g3364 DYVQPDVINVSRSDQARKAARAISKLAKGAGVEDSFPAFVGAIAHDGARHLCEAAMLCIAMAGVAIAASHMESATVSPPDAANAYAACIKVLMGYLPAGLNGQSELARAVGIAKCIGSSLDSNAAISMESLRIHGSFPLGDTKHEARWAPQTIPAAVNASAEHAPALTLLKGKGRAVEEAKERHIRPVRVGESAKRLKGRIASPSRKVPKKAPLVNSGLPTSSDFRTLRELLHGENRDPPSYQVTEEQLHEEREAFKEWYDFPRMRPDSRASLGDDLDTSPPEREKIVGEAPCRPREESTESTTGLLLAYGSLGDACTHWIDAFGFIVQLSRAAADRQRTLAFIDCDLDVLILIRSLESRLAQIGKKNASNARGIGDQVREVLAQMPRSSLPPKTCEIFGQLRIATSEEAEEQAANQGSGTGYEEGRRFFTDEAAAMYGRDAAGGELGAMNIVFDDAMDNLTDDYDMSSFGGDLFEDTSFGHDLGLDPTAKDMEDLGTDNDEQANTDGEFVEELEAGLGAAPRESDKVKIKVKFDMEVMMKNRSTFKDLYTERQRVDTKTKFVATSLEQGHIRRQLTWNYETLTQSRTIQRIVERVRIDYADILTEAGGLKKAAV* # PASA_UPDATE: g14039.t1, single gene model update, valid-1, status:[pasa:asmbl_4389,status:12], valid-1 NODE_2471_length_6160_cov_37.9397 . gene 40 2944 . - . ID=g14039;Name=g14039.t1 NODE_2471_length_6160_cov_37.9397 . mRNA 40 2944 . - . ID=g14039.t1;Parent=g14039;Name=g14039.t1 NODE_2471_length_6160_cov_37.9397 . five_prime_UTR 2765 2944 . - . ID=g14039.t1.utr5p1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 2596 2944 . - . ID=g14039.t1.exon1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 2596 2764 . - 0 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 2426 2464 . - . ID=g14039.t1.exon2;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 2426 2464 . - 2 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 1707 2297 . - . ID=g14039.t1.exon3;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 1707 2297 . - 2 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 1398 1478 . - . ID=g14039.t1.exon4;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 1398 1478 . - 2 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 1189 1294 . - . ID=g14039.t1.exon5;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 1189 1294 . - 2 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 917 1051 . - . ID=g14039.t1.exon6;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 917 1051 . - 1 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 662 806 . - . ID=g14039.t1.exon7;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 662 806 . - 1 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 310 554 . - . ID=g14039.t1.exon8;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 310 554 . - 0 ID=cds.g14039.t1;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . exon 40 187 . - . ID=g14039.t1.exon9;Parent=g14039.t1 NODE_2471_length_6160_cov_37.9397 . CDS 40 187 . - 1 ID=cds.g14039.t1;Parent=g14039.t1;3_prime_partial=true #PROT g14039.t1 g14039 MRRVRPASSRSGLAWCRPSFDVTQAFLLITFVVLIVANGLFFLVIRGGNTVRHHDNHPGTKAERGERDSDFVADAGTGAAPADDSVEEESLPGNEVAILTEDGARRPLCGLEKACGAREIAVSVFSGKSRSEVCVEGRVVASYHAPAKRGMVVVVINEGTGAVIEEHIFDTYNSGREFVDYLNGINGARIVVLGTLDDASFALGALGRSAIRTLGSRQIDGLNFRGSWSLIGAKGARGASNMESVSPGAEFEWGKDLEVRGCVSLEGSTAPLVGGSARRRFCAIHEGYGAFCQNNQLDVEIQAPAYQGADGFSRANTIPIAVIAGNRPRYLQRCLSSLFMNAGLDKENVFVFVDGLFAEPIELTEVFGVHGFQRPKTVSTSTMAKTFQNADMIALHYRQSLDSVWEMNPGAEYVLVVEEDLEVAPDFLRYFSQTIPLLERDSTLLCVSAWNDNAFKHSSEDATQLYRTDFFPGLGWLLSRKLWDEIRPKWPPCCYGWSWDLWLREPDNTKGRECIIPDVPRTYHFGSRGLNVDNDYFFNKYFRDHRLNDDAHM # PASA_UPDATE: g14040.t1, single gene model update, valid-1, status:[pasa:asmbl_4388,status:12], valid-1 NODE_2471_length_6160_cov_37.9397 . gene 3880 5944 . + . ID=g14040;Name=g14040.t1 NODE_2471_length_6160_cov_37.9397 . mRNA 3880 5944 . + . ID=g14040.t1;Parent=g14040;Name=g14040.t1 NODE_2471_length_6160_cov_37.9397 . five_prime_UTR 3880 3906 . + . ID=g14040.t1.utr5p1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 3880 4562 . + . ID=g14040.t1.exon1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 3907 4562 . + 0 ID=cds.g14040.t1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 4642 4742 . + . ID=g14040.t1.exon2;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 4642 4742 . + 1 ID=cds.g14040.t1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 4988 5037 . + . ID=g14040.t1.exon3;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 4988 5037 . + 2 ID=cds.g14040.t1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 5216 5299 . + . ID=g14040.t1.exon4;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 5216 5299 . + 0 ID=cds.g14040.t1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 5433 5544 . + . ID=g14040.t1.exon5;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 5433 5544 . + 0 ID=cds.g14040.t1;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . exon 5722 5944 . + . ID=g14040.t1.exon6;Parent=g14040.t1 NODE_2471_length_6160_cov_37.9397 . CDS 5722 5944 . + 2 ID=cds.g14040.t1;Parent=g14040.t1;3_prime_partial=true #PROT g14040.t1 g14040 MNFTHLSVQRGLGRSSVVAATSVVVPRCSAEYFHSLSVLHCARFASVHCSSPSASAIVYSLRKSAQVGSAQSALQSQRLPPLLALGRRFRNTMAENPACTLLDGREIAAALRSRLAAEIAQMRVDHNGFVPGLAIVQVGGREDSNVYIRMKQKAAEECGIRFTHVHLPESVSQSEVLDRIEQLNDDTSVHGILVQLPLPAAISEQIITEAIDPKKDVDGFHSSNFGKLAQRGAQPLFVPCTPKACLELIQRAGPISGKIAVVIGRSNIVGQPVASLLQHHNATVTICHTKTPNIAEIVSRADIVVAAVGHAEYVRGSWIKKGAIVIDVGINSIADASKKSGTRLTGDVAFDEAAAAASAITPVPGGVGPMTVAMLVENVVEASRRYLATLGAPWSLRFLPIDVLEPVP # ORIGINAL: g2658.t1 original gene structure, not modified by PASA NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS gene 1104 1550 . + . ID=g2658;Name=g2658.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS mRNA 1104 1550 . + . ID=g2658.t1;Parent=g2658;Name=g2658.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS exon 1104 1550 . + . ID=g2658.t1.exon1;Parent=g2658.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS CDS 1104 1550 . + 0 ID=cds.g2658.t1;Parent=g2658.t1 #PROT g2658.t1 g2658 MEDKAQIIETIDKQITGTIEKLAKLPKLFQSPGTLQELRETTPVGPLLDKLQSLNFYHNYLGKRRSRQPIHRRQRAGQSEAVAENEAAESADQSESTDEDEKTDRAAEQKYKALENQTLETIDMFAALVPLPSSSDQPSPIEPAQRNL* # PASA_UPDATE: g2657.t1, single gene model update, valid-1, status:[pasa:asmbl_5493,status:12], valid-1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . gene 118 878 . + . ID=g2657;Name=g2657.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . mRNA 118 878 . + . ID=g2657.t1;Parent=g2657;Name=g2657.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . exon 118 268 . + . ID=g2657.t1.exon1;Parent=g2657.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . CDS 118 268 . + 0 ID=cds.g2657.t1;Parent=g2657.t1;5_prime_partial=true NODE_3058_length_4433_cov_54.6826_potentialcontaminant . exon 470 878 . + . ID=g2657.t1.exon2;Parent=g2657.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . CDS 470 555 . + 2 ID=cds.g2657.t1;Parent=g2657.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant . three_prime_UTR 556 878 . + . ID=g2657.t1.utr3p1;Parent=g2657.t1 #PROT g2657.t1 g2657 ESCECVDENKKETIAFVFLWVNVGYVREINLHVVAFTLAYDWKIGDWFSHEPTGKDPTTFLTYACIFYACGLIATLAL* # ORIGINAL: g2659.t1 original gene structure, not modified by PASA NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS gene 1690 2530 . - . ID=g2659;Name=g2659.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS mRNA 1690 2530 . - . ID=g2659.t1;Parent=g2659;Name=g2659.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS exon 2497 2530 . - . ID=g2659.t1.exon1;Parent=g2659.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS CDS 2497 2530 . - 0 ID=cds.g2659.t1;Parent=g2659.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS exon 1690 2174 . - . ID=g2659.t1.exon2;Parent=g2659.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS CDS 1690 2174 . - 2 ID=cds.g2659.t1;Parent=g2659.t1 #PROT g2659.t1 g2659 MYLAESDWNMVDHLFGPRGICTIYYPDRPYDKPDDKTYDHLFGPLICTIYPDDYYILKELKELENQIEDNDTELAELLQPASTRTGASPSQSTRTRSDNISSIPRHYMIPQLFANNLQYQRRFAQVGPLWEKMIKLNTERTKLLDEIQAALRYQLLHYLLFIFDKKPSLRKN* # ORIGINAL: g2660.t1 original gene structure, not modified by PASA NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS gene 3255 3980 . + . ID=g2660;Name=g2660.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS mRNA 3255 3980 . + . ID=g2660.t1;Parent=g2660;Name=g2660.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS exon 3255 3980 . + . ID=g2660.t1.exon1;Parent=g2660.t1 NODE_3058_length_4433_cov_54.6826_potentialcontaminant AUGUSTUS CDS 3255 3980 . + 0 ID=cds.g2660.t1;Parent=g2660.t1 #PROT g2660.t1 g2660 MTGKDHIDGEDTFVRLFLFINEILENERPSTFALTLHGGLGRDGERLHFKRHPTISTSLLDPAEFKKVLLKAKGLCLKKDKENDNNVSYETMKQYAQNTVADIQMKQLVNNCDLLKTMTEQNHQIRDQIKSEIITHVFGSAPTAISQVELLDKISHVPRVQKAIEKFATTESRAINQPYTVSLNKFVRKNGSIYTTSELKIFNAKFSKRVLAPLDHPFFKALPAGVKNVVGSFPVGSEYVA* # ORIGINAL: g5283.t1 original gene structure, not modified by PASA NODE_4406_length_1664_cov_32.9811 AUGUSTUS gene 74 1364 . + . ID=g5283;Name=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS mRNA 74 1364 . + . ID=g5283.t1;Parent=g5283;Name=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS exon 74 364 . + . ID=g5283.t1.exon1;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS CDS 74 364 . + 0 ID=cds.g5283.t1;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS exon 610 707 . + . ID=g5283.t1.exon2;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS CDS 610 707 . + 0 ID=cds.g5283.t1;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS exon 856 986 . + . ID=g5283.t1.exon3;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS CDS 856 986 . + 1 ID=cds.g5283.t1;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS exon 1174 1364 . + . ID=g5283.t1.exon4;Parent=g5283.t1 NODE_4406_length_1664_cov_32.9811 AUGUSTUS CDS 1174 1364 . + 2 ID=cds.g5283.t1;Parent=g5283.t1 #PROT g5283.t1 g5283 VIRYDLLPKCEGEKDITNLLSKIAVLKLNGGLGTTMGCTGPKSAIEVRDEMTFLDMTVRSIEQLNIKYDSDVPLILMNSFNTHDETEKIIQKYAGNEVTIKTFNQSRYPRISKDTLVPVPKTTNGNSDDWYPPGHGDIYEALYNSGFLADLLEQGREYLFISNVDNLGATVDLTILNYLVNQEPKREFVMEVTDKTRADVKGGTLIDYEGKIRLLEIAQVPKDHVGIDFSLRVTHS* # ORIGINAL: g4032.t1 original gene structure, not modified by PASA NODE_1791_length_9241_cov_43.8488 AUGUSTUS gene 500 1144 . + . ID=g4032;Name=g4032.t1 NODE_1791_length_9241_cov_43.8488 AUGUSTUS mRNA 500 1144 . + . ID=g4032.t1;Parent=g4032;Name=g4032.t1 NODE_1791_length_9241_cov_43.8488 AUGUSTUS exon 500 1144 . + . ID=g4032.t1.exon1;Parent=g4032.t1 NODE_1791_length_9241_cov_43.8488 AUGUSTUS CDS 500 1144 . + 0 ID=cds.g4032.t1;Parent=g4032.t1 #PROT g4032.t1 g4032 EAYAAFRAALVERLGDAGKSAYVYPQDALHVTVATLVSFRDSPLSRPSTTDAQQAMELRNRTIEAWRTALSNAFSVPIFDQAPFEVEIGRPILSPAAGYFSMSDVAGGISTIRDLVRRATSDPVFQTSGCPQPAEKGNLSIPNIVHSTFLRFVSEPSDSDGFRKAFAECAEKWVPMRALVTGVTLTLEDAPFMHVPVDEKHCIRVFSIGESTCR* # PASA_UPDATE: g4033.t1, single gene model update, valid-1, status:[pasa:asmbl_2634,status:12], valid-1 NODE_1791_length_9241_cov_43.8488 . gene 1849 2939 . + . ID=g4033;Name=g4033.t1 NODE_1791_length_9241_cov_43.8488 . mRNA 1849 2939 . + . ID=g4033.t1;Parent=g4033;Name=g4033.t1 NODE_1791_length_9241_cov_43.8488 . five_prime_UTR 1849 1932 . + . ID=g4033.t1.utr5p1;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . exon 1849 2003 . + . ID=g4033.t1.exon1;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . CDS 1933 2003 . + 0 ID=cds.g4033.t1;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . exon 2358 2496 . + . ID=g4033.t1.exon2;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . CDS 2358 2496 . + 1 ID=cds.g4033.t1;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . exon 2747 2939 . + . ID=g4033.t1.exon3;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . CDS 2747 2782 . + 0 ID=cds.g4033.t1;Parent=g4033.t1 NODE_1791_length_9241_cov_43.8488 . three_prime_UTR 2783 2939 . + . ID=g4033.t1.utr3p1;Parent=g4033.t1 #PROT g4033.t1 g4033 MKIYVTVGNKTFAVPYKDPKATVGWLIEQTKERAGSSIVVSEVRHNGAILNLNDEIGDLLNDGDTVVMTQGGYIDSYCTVS* # PASA_UPDATE: g4034.t1, single gene model update, valid-1, status:[pasa:asmbl_2635,status:12], valid-1 NODE_1791_length_9241_cov_43.8488 . gene 7321 8923 . + . ID=g4034;Name=g4034.t1 NODE_1791_length_9241_cov_43.8488 . mRNA 7321 8923 . + . ID=g4034.t1;Parent=g4034;Name=g4034.t1 NODE_1791_length_9241_cov_43.8488 . five_prime_UTR 7321 7476 . + . ID=g4034.t1.utr5p1;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . exon 7321 7742 . + . ID=g4034.t1.exon1;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . CDS 7477 7742 . + 0 ID=cds.g4034.t1;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . exon 7884 8116 . + . ID=g4034.t1.exon2;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . CDS 7884 8116 . + 1 ID=cds.g4034.t1;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . exon 8778 8923 . + . ID=g4034.t1.exon3;Parent=g4034.t1 NODE_1791_length_9241_cov_43.8488 . CDS 8778 8923 . + 2 ID=cds.g4034.t1;Parent=g4034.t1 #PROT g4034.t1 g4034 MRQCMGHCSARRLSWSSVGQLSQLVPVALLLHVVAVAGAPVVGGPGGCLFFSDPSQFAVMYDSTSSPEGGVQTITGFPDRAVTIEYWIRYVKDVKNPDQTYTAFSYASANVVSSSGETFSDDNVLQCCGITDGRQSVLVLASIGAKPVLAPRGDEYSLKFDRWYHFAITFEAAYNLSNPSVVNVYRDGELFMNAVNPQYGNASMPSSGTFVLGA* # PASA_UPDATE: g11565.t1, single gene model update, valid-1, status:[pasa:asmbl_5241,status:12], valid-1 NODE_2922_length_4734_cov_74.4694 . gene 2430 4648 . - . ID=g11565;Name=g11565.t1 NODE_2922_length_4734_cov_74.4694 . mRNA 2430 4648 . - . ID=g11565.t1;Parent=g11565;Name=g11565.t1 NODE_2922_length_4734_cov_74.4694 . five_prime_UTR 4535 4648 . - . ID=g11565.t1.utr5p1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 4529 4648 . - . ID=g11565.t1.exon1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 4529 4534 . - 0 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 4114 4211 . - . ID=g11565.t1.exon2;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 4114 4211 . - 0 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 3842 3882 . - . ID=g11565.t1.exon3;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 3842 3882 . - 1 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 3613 3662 . - . ID=g11565.t1.exon4;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 3613 3662 . - 2 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 3191 3292 . - . ID=g11565.t1.exon5;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 3191 3292 . - 0 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . exon 2430 2712 . - . ID=g11565.t1.exon6;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . CDS 2536 2712 . - 0 ID=cds.g11565.t1;Parent=g11565.t1 NODE_2922_length_4734_cov_74.4694 . three_prime_UTR 2430 2535 . - . ID=g11565.t1.utr3p1;Parent=g11565.t1 #PROT g11565.t1 g11565 MQVQRNKPGEAAPYNGSIDCVKKVWNNHGVTGLYRGTLSTLVREFQGYGGYFLVYEWATRNFIPEGKKSTLPILACGAIAGFGYWLPIFPVDVIKSKLQADSLSSPKYSGTVDCIRKTFAEEGIRGFYRGLTPCVLRAIPASASTFLAFEVAMKLLG* # PASA_UPDATE: g11564.t1, single gene model update, valid-1, status:[pasa:asmbl_5240,status:3], valid-1 NODE_2922_length_4734_cov_74.4694 . gene 192 2414 . + . ID=g11564;Name=g11564.t1 NODE_2922_length_4734_cov_74.4694 . mRNA 192 2414 . + . ID=g11564.t1;Parent=g11564;Name=g11564.t1 NODE_2922_length_4734_cov_74.4694 . five_prime_UTR 192 292 . + . ID=g11564.t1.utr5p1;Parent=g11564.t1 NODE_2922_length_4734_cov_74.4694 . exon 192 454 . + . ID=g11564.t1.exon1;Parent=g11564.t1 NODE_2922_length_4734_cov_74.4694 . CDS 293 454 . + 0 ID=cds.g11564.t1;Parent=g11564.t1 NODE_2922_length_4734_cov_74.4694 . exon 617 2414 . + . ID=g11564.t1.exon2;Parent=g11564.t1 NODE_2922_length_4734_cov_74.4694 . CDS 617 1933 . + 0 ID=cds.g11564.t1;Parent=g11564.t1 NODE_2922_length_4734_cov_74.4694 . three_prime_UTR 1934 2414 . + . ID=g11564.t1.utr3p1;Parent=g11564.t1 #PROT g11564.t1 g11564 MARASVVVAAAVLLIALTATGAAAVTLTQAIATLRGVGDYSSIIGTVRFTTNNDTGLVTVDANIRNIVVGGANSTTAHSIIIFANGDFANGTSSALSNGADGPHGCPPSPTRHTGDLGNFQAADGTITITKANLDLLSLTDGTSILGRGIGLLLETDDCTTSPGTVIARGVIGVANTALLADKNGASSNDSSVVFATVQLFGTGSCKTAAAAANITGPTCSGSIYLRTLVDGSTSVSATLNGPFVNGSRYGFHIHNWGDLSEFANASIAQTGTQVGPHFNMNATMKHGFPNTVVRHTGDFGNAKAGPDANTAYYNFTIPSGVTVPLKNILGRAFSVHAKEDGGFSCDPSTGDAGARWLIGVIGVSDADYAPSLPIASFAADDAWTTRTCVTSPVVVPSASSAVASATASAIASATASATASASNPIVDTGSHESTFSYDHRLVAGATIGSIAGVAILGAVGYWLYSTKFSAAAKAKGVESRANLVTHPNHEV* # ORIGINAL: g11190.t1 original gene structure, not modified by PASA NODE_2586_length_5784_cov_35.2322 AUGUSTUS gene 1 86 . - . ID=g11190;Name=g11190.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS mRNA 1 86 . - . ID=g11190.t1;Parent=g11190;Name=g11190.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS exon 1 86 . - . ID=g11190.t1.exon1;Parent=g11190.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS CDS 1 86 . - 0 ID=cds.g11190.t1;Parent=g11190.t1 #PROT g11190.t1 g11190 MTDTQQQQQQQQQQQQQQQQQQQQQQQQ # ORIGINAL: g11191.t1 original gene structure, not modified by PASA NODE_2586_length_5784_cov_35.2322 AUGUSTUS gene 1210 3837 . - . ID=g11191;Name=g11191.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS mRNA 1210 3837 . - . ID=g11191.t1;Parent=g11191;Name=g11191.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS exon 1210 3837 . - . ID=g11191.t1.exon1;Parent=g11191.t1 NODE_2586_length_5784_cov_35.2322 AUGUSTUS CDS 1210 3837 . - 0 ID=cds.g11191.t1;Parent=g11191.t1 #PROT g11191.t1 g11191 MADPIVPVACPRRSEPRPIDKNDSFLSTAVGDAVPQTASSLSPLCRRADDHSSQLDAPMSPPGMLLMGGGRHVSLLSSTGTFDGEASTAESDGLELRMPALQMPLGRSIYARISVEELHDDLINIVFSYLRPADILCAACVCRRFRDVAMRQEVWFHVCQRMFIHALKLRSLHVDWRALTLALDGRNPYAHITLPMTLPIDDAAALLCVDYVALSDEDRLLDAMAVVAHTVREYGHYKLAETLFQKAMEFALRRYAEIAPGDKAIEEEDAVGLGRARPSASQASSTPSVSSSAAGSSNAAGGPSKSAPAPPGVASASSLKVTKPSASFASMISGLFSRNAPRHGNATEGSGGGTVVAAAGESEVVGSSSTHADAHTHAHTHTFTHATATSVHQESASHFPADSESMLKATAFEGSPSQRVQSLRVLAFRATVRDSHVDFPRIASKSGGLVLAMLQGWYGRRLADAFYNLSLAKGNQGRLTGRNGSKRLREKAIEMYKRTLGGDSEQVAVSVFALADIYYVEKEYDKALPLYQEALRIRRRLFPEESEEMAQTYVGLGLAYDGMGQYDLAERYYLKALPIRERLHGPWHPKVARVLVNIGALYKSKGELSRTVPLYERALAIREKWLGVKHPYTERVRANLRRTKEQLGLVPSPTQPQAQGHAQAQAQTEPQAQEQAQPPTPLPLHPALAPLLQLAHQQQEQQQQQQQQQQQQQQESRTLAGAAVDAPSLPLWPTPTTSTTDTAPRGPTASAPIAVPRGAPIPPELLLDTAADAASTSITSVSSSGTHVTRLRTLSSEPPDESASSSGASLSAPLPAVSAIVSEVSGGPGFDPSSRSAVRSASILQRQNSVVASPQMSGRVESTQAESRGKQCILQ* # PASA_UPDATE: g5532.t1, single gene model update, valid-1, status:[pasa:asmbl_6928,status:12], valid-1 NODE_4077_length_2229_cov_37.0218 . gene 145 1499 . - . ID=g5532;Name=g5532.t1 NODE_4077_length_2229_cov_37.0218 . mRNA 145 1499 . - . ID=g5532.t1;Parent=g5532;Name=g5532.t1 NODE_4077_length_2229_cov_37.0218 . five_prime_UTR 1270 1499 . - . ID=g5532.t1.utr5p1;Parent=g5532.t1 NODE_4077_length_2229_cov_37.0218 . exon 1251 1499 . - . ID=g5532.t1.exon1;Parent=g5532.t1 NODE_4077_length_2229_cov_37.0218 . CDS 1251 1269 . - 0 ID=cds.g5532.t1;Parent=g5532.t1 NODE_4077_length_2229_cov_37.0218 . exon 145 1052 . - . ID=g5532.t1.exon2;Parent=g5532.t1 NODE_4077_length_2229_cov_37.0218 . CDS 145 1052 . - 2 ID=cds.g5532.t1;Parent=g5532.t1;3_prime_partial=true #PROT g5532.t1 g5532 MANFGAGFGSFGTSTPGFGGQSGLSSGSTVFGQQPQQQQQQQQQQQQQQGGMFGGGNAGGGLFGSTTPGAASTPGLMFGQQPQQQQQQPQQGMFGGATQTTGMGGSMFGGGATSTPGAGAFGTGATSGGLFGTVQPGSTGGSLFGGGGSTGLGFGAQSTTGTGTGTTGFSLGGAGTGGTSLFGQQQQPQQQQQQQGGLFGSTGTGTTGGGGLFGSLGSTGSSAFGSTGLGSTGFGSSGLGSTGFGSTGFGSTGLGGLGGGGFGTGGLGGQSLGMHTGQAGGMPVAMSPLQELERIFMAYDATNPNCKFK # ORIGINAL: g11335.t1 original gene structure, not modified by PASA NODE_891_length_16212_cov_39.8613 AUGUSTUS gene 5995 7486 . - . ID=g11335;Name=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS mRNA 5995 7486 . - . ID=g11335.t1;Parent=g11335;Name=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 7188 7486 . - . ID=g11335.t1.exon1;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 7188 7486 . - 0 ID=cds.g11335.t1;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 6886 6997 . - . ID=g11335.t1.exon2;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 6886 6997 . - 1 ID=cds.g11335.t1;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 6358 6656 . - . ID=g11335.t1.exon3;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 6358 6656 . - 0 ID=cds.g11335.t1;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 5995 6217 . - . ID=g11335.t1.exon4;Parent=g11335.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 5995 6217 . - 1 ID=cds.g11335.t1;Parent=g11335.t1 #PROT g11335.t1 g11335 MAEAVVSILPLCPDPNSNNPTQSPTPLPHTHTFASYARPSLLAAAPPLVILCPADAIADHNHSSPAEYFSSCGVTADGLGELRIMSVPRHAPLTRMQYDAERAAIDGTLMSDEDMARMERHMRTAMHEATAAHARGNEGVGAVLVDPRTDTVVARGGDATTDHPLRHAVVSCIEHLSRAQLALAPRAGNAGNAGFAVGEQVEHVEQVEQVEQEADQEEEDYLCTGIDLYATREPCVMCCMALVHSRIGRVFYGTPQATGGIGSAYRIHADKGVNHRFDVHADVMRDECERLPRRHHPTMPDIPPDAAQPQ* # PASA_UPDATE: g11337.t1, single gene model update, valid-1, status:[pasa:asmbl_9858,status:3], valid-1 NODE_891_length_16212_cov_39.8613 . gene 11554 16127 . - . ID=g11337;Name=g11337.t1 NODE_891_length_16212_cov_39.8613 . mRNA 11554 16127 . - . ID=g11337.t1;Parent=g11337;Name=g11337.t1 NODE_891_length_16212_cov_39.8613 . five_prime_UTR 15726 16127 . - . ID=g11337.t1.utr5p1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 15575 16127 . - . ID=g11337.t1.exon1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 15575 15725 . - 0 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 15291 15361 . - . ID=g11337.t1.exon2;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 15291 15361 . - 2 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 15037 15142 . - . ID=g11337.t1.exon3;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 15037 15142 . - 0 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 14278 14766 . - . ID=g11337.t1.exon4;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 14278 14766 . - 2 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 13860 13987 . - . ID=g11337.t1.exon5;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 13860 13987 . - 2 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 13157 13702 . - . ID=g11337.t1.exon6;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 13157 13702 . - 0 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 12412 12778 . - . ID=g11337.t1.exon7;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 12412 12778 . - 0 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 12095 12254 . - . ID=g11337.t1.exon8;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 12095 12254 . - 2 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . exon 11554 11791 . - . ID=g11337.t1.exon9;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . CDS 11713 11791 . - 1 ID=cds.g11337.t1;Parent=g11337.t1 NODE_891_length_16212_cov_39.8613 . three_prime_UTR 11554 11712 . - . ID=g11337.t1.utr3p1;Parent=g11337.t1 #PROT g11337.t1 g11337 MVDANRLRTGVRPGLLSDTSDDALAIAWRRAESLFACGRYSDCAGALRECVLAEGRFTWRSVAVSINAASCLFETARLSTIPDSAAPAARDVSLRDALSAVRDVLVRIKGLPSHSPSASTIHIAAASLFAAASIASPAVNALEARSASHDPPSVGAVDCASHLLAVAQSLRRARLARLGGHVSSHSHPGAASAGDGERTLRLPLSREAADVEALCLIACGCGHDAAAMCASLSECVRVAAHLAAGNLGGCGDCMATMGAELSPDTAFACLLKGHVTFALGNLRSARTLFDRCHDSPHANIAAVSRYMSALCHLHEGRSSAALALFRGCLGSDGKARKGVVMTHEGRTVAVASLIGASVCLRRDGNVTASESVARSAVRLSRAPAADLHGGTRDFHNAERVVVIDAAPSTLCANGRKEAPQAPPACLRVRELEAAPRPRTSHEPGWTRYHATGVASSGALRLCAMRLAAHALAVQGKWAECVAVYDECASSREALPEERGSDAVASEHAWALKMAGNLDAAVEVCRVATDAHPRSAPLLLTYESVLSRAGRKDDASACLMRVLQEQRVPCGGGGGGEDGPLSRGDTWAAVAANGLCLSAAMCGAHEDAVAHSLHAVRLSRGATQHLYNHVLILARCGRLDEARDAWTSHRGAATDARESAARRECETAGDITTCAPSVSDNVNEATFKRLDDILLHGRC* # PASA_UPDATE: g11334.t1, single gene model update, valid-1, status:[pasa:asmbl_9859,status:3], valid-1 NODE_891_length_16212_cov_39.8613 . gene 3369 5787 . + . ID=g11334;Name=g11334.t1 NODE_891_length_16212_cov_39.8613 . mRNA 3369 5787 . + . ID=g11334.t1;Parent=g11334;Name=g11334.t1 NODE_891_length_16212_cov_39.8613 . five_prime_UTR 3369 3465 . + . ID=g11334.t1.utr5p1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . exon 3369 3664 . + . ID=g11334.t1.exon1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . CDS 3466 3664 . + 0 ID=cds.g11334.t1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . exon 3913 4044 . + . ID=g11334.t1.exon2;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . CDS 3913 4044 . + 2 ID=cds.g11334.t1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . exon 4316 5000 . + . ID=g11334.t1.exon3;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . CDS 4316 5000 . + 2 ID=cds.g11334.t1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . exon 5410 5787 . + . ID=g11334.t1.exon4;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . CDS 5410 5668 . + 1 ID=cds.g11334.t1;Parent=g11334.t1 NODE_891_length_16212_cov_39.8613 . three_prime_UTR 5669 5787 . + . ID=g11334.t1.utr3p1;Parent=g11334.t1 #PROT g11334.t1 g11334 MADANEEPRPKYRIATEIVALEKTIKDAYNPASTPIYQTATFKQDSAASFGEYDYTRSGNPTRSVLESHVARLCGGTHAYAVSSGMSALDVILRTLKSGDEIVAGTDIYGGTNRLLKFMENQKIYTRHVDVTNLEQISAAMTPATRIVLIETPTNPLIRVTDLRAVAQIAHRGNALLVVDNTMMSPYLQRPLELGADIEYHSATKYLSGHHDLMAGVVVTKDERIAKDIYFVINAVGCGLAPFDCWLLLRGVKTLSVRMERQQENAQKVAEYLDGKVLKVNYPGLPSYPQRNIHFAQATGAGAVLSFETGSTMVSQQIVEACRLFSISVSFGCINSLISMPCRMSHASIPADVRKAREMPEDLIRLCIGIEDHRDLIDDLRQALIAANCIDADAEADLGHTTGHVDDSTTLAPAPATAVATNSL* # PASA_UPDATE: g11336.t1, single gene model update, valid-1, status:[pasa:asmbl_9860,status:3], valid-1 NODE_891_length_16212_cov_39.8613 . gene 8841 11062 . + . ID=g11336;Name=g11336.t1 NODE_891_length_16212_cov_39.8613 . mRNA 8841 11062 . + . ID=g11336.t1;Parent=g11336;Name=g11336.t1 NODE_891_length_16212_cov_39.8613 . five_prime_UTR 8841 9057 . + . ID=g11336.t1.utr5p1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . exon 8841 9294 . + . ID=g11336.t1.exon1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . CDS 9058 9294 . + 0 ID=cds.g11336.t1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . exon 9614 9785 . + . ID=g11336.t1.exon2;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . CDS 9614 9785 . + 0 ID=cds.g11336.t1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . exon 10259 10408 . + . ID=g11336.t1.exon3;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . CDS 10259 10408 . + 2 ID=cds.g11336.t1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . exon 10587 11062 . + . ID=g11336.t1.exon4;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . CDS 10587 10747 . + 2 ID=cds.g11336.t1;Parent=g11336.t1 NODE_891_length_16212_cov_39.8613 . three_prime_UTR 10748 11062 . + . ID=g11336.t1.utr3p1;Parent=g11336.t1 #PROT g11336.t1 g11336 MATKALTSSPTRSPAKGPSNAPAFTIQATMVNSKVGSPPKAGAFKPRPSKPTAFRKFYDRGDFPIALEHDTKGNKIAWKVEVEKLDYHHYMPLFFDGLCETTHPYEFFARQGIHDMLDHGGSKILPVIPQLIIPIKNALNTRDPQVVCTTLKVLQHLVVSADMVGEALVPYYRQILPILNIFKNKNVNAGDGIEYSQQKRQNIVDLIQETLEAFERHGGEDAFINIKYMIPTYESCMLT* # ORIGINAL: g11333.t1 original gene structure, not modified by PASA NODE_891_length_16212_cov_39.8613 AUGUSTUS gene 1907 2938 . - . ID=g11333;Name=g11333.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS mRNA 1907 2938 . - . ID=g11333.t1;Parent=g11333;Name=g11333.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 2624 2938 . - . ID=g11333.t1.exon1;Parent=g11333.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 2624 2938 . - 0 ID=cds.g11333.t1;Parent=g11333.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS exon 1907 2386 . - . ID=g11333.t1.exon2;Parent=g11333.t1 NODE_891_length_16212_cov_39.8613 AUGUSTUS CDS 1907 2386 . - 0 ID=cds.g11333.t1;Parent=g11333.t1 #PROT g11333.t1 g11333 MGTARVVEAMGLAAHTHTHAAYPHADPHSSYSQTPPTADGGDDDALQLLESLQRAHTRTIELERLKREIARDMELLAGEEDVLAECRAEREALAEERRLRLEELQAIHADVEALDAAIAVSTAERDALHERQRSLEKMYEDAKDEVDSERAKHGLAKLPHFRDERDALQALYLERRRARWREAGADTSGGGTGGIGGGPAGGVPTVASLSGQGSHMSIARLGASGGALHTNGMRVVLRAPPAPTGVRKRGRPRKTNGTNSSDAY* # ORIGINAL: g10978.t1 original gene structure, not modified by PASA NODE_5421_length_859_cov_31.1212 AUGUSTUS gene 110 829 . - . ID=g10978;Name=g10978.t1 NODE_5421_length_859_cov_31.1212 AUGUSTUS mRNA 110 829 . - . ID=g10978.t1;Parent=g10978;Name=g10978.t1 NODE_5421_length_859_cov_31.1212 AUGUSTUS exon 762 829 . - . ID=g10978.t1.exon1;Parent=g10978.t1 NODE_5421_length_859_cov_31.1212 AUGUSTUS CDS 762 829 . - 0 ID=cds.g10978.t1;Parent=g10978.t1 NODE_5421_length_859_cov_31.1212 AUGUSTUS exon 110 278 . - . ID=g10978.t1.exon2;Parent=g10978.t1 NODE_5421_length_859_cov_31.1212 AUGUSTUS CDS 110 278 . - 1 ID=cds.g10978.t1;Parent=g10978.t1 #PROT g10978.t1 g10978 MLNLSHLNVVNIVGVVTDGDPMFIVLEFAPHGSLKSFLSKLEHHRNANRPMDFNLIFIHFARDIADGMAYLARQKIVHK # ORIGINAL: g3452.t1 original gene structure, not modified by PASA NODE_187_length_32874_cov_39.4519 AUGUSTUS gene 13465 16945 . + . ID=g3452;Name=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS mRNA 13465 16945 . + . ID=g3452.t1;Parent=g3452;Name=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 13465 13614 . + . ID=g3452.t1.exon1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 13465 13614 . + 0 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 13827 13902 . + . ID=g3452.t1.exon2;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 13827 13902 . + 0 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 14052 14333 . + . ID=g3452.t1.exon3;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 14052 14333 . + 2 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 14661 15297 . + . ID=g3452.t1.exon4;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 14661 15297 . + 2 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 15577 15790 . + . ID=g3452.t1.exon5;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 15577 15790 . + 1 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 15972 16061 . + . ID=g3452.t1.exon6;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 15972 16061 . + 0 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 16230 16282 . + . ID=g3452.t1.exon7;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 16230 16282 . + 0 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 16415 16541 . + . ID=g3452.t1.exon8;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 16415 16541 . + 1 ID=cds.g3452.t1;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 16784 16945 . + . ID=g3452.t1.exon9;Parent=g3452.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 16784 16945 . + 0 ID=cds.g3452.t1;Parent=g3452.t1 #PROT g3452.t1 g3452 MMCRRPTVAMPSTVAPTAITDMRQLSASLRAFITLADDAREGALCASHDEISERKTPVKQAAFKKKASSSKGTKKTSSQLQQTVKIPTGNKTPSPTQRSLLSYFSRNKENVSAFVSEHTRAAYGEEDDAIDGNDALEKATSTAVNRRLSSEFSLVTCSDGEEKAKARPKPSCRNPLSECNVQTDTPCPSHVPMEAAIADIPVASILHSDAESCRDVEMTIVDIGMCGTDTPSSTQSTNSDVDLSGTPCDPEQREKQIEWLKREESDFLMGLLEHTTLEMADERVSQSQSTGEPSASAKACELSQQSCNVRARRAVGGLVSAVEVPPALVAPAVIAAEDEKQKENKNFRKIVTSINLSTKSASAAKNSDDKEDDALKIWMANAYKFVKTCTVKNVDPREAPLLPKKKSTAPKLTLVLDLDETLVHCASRYQPVPQGRASPSAVITVESEFGEQKLNMWRRPFVAQFIQRMSKFYEIVVYTASLQGYADAVIKDLDPRGQYISHSLYRGHCVLVGGHYVKDLRRIGRALEAVVIVDNSPQAYAFQLSNAIEIPSFFDDELDGELQSLSNFLFDLAISDPVDVRPLLESTFKLHEKLPN* # PASA_UPDATE: g3450.t1, single gene model update, valid-1, status:[pasa:asmbl_2894,status:12], valid-1 NODE_187_length_32874_cov_39.4519 . gene 179 5221 . + . ID=g3450;Name=g3450.t1 NODE_187_length_32874_cov_39.4519 . mRNA 179 5221 . + . ID=g3450.t1;Parent=g3450;Name=g3450.t1 NODE_187_length_32874_cov_39.4519 . five_prime_UTR 179 180 . + . ID=g3450.t1.utr5p1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 179 318 . + . ID=g3450.t1.exon1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 181 318 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 615 689 . + . ID=g3450.t1.exon2;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 615 689 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 1044 1132 . + . ID=g3450.t1.exon3;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 1044 1132 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 1467 1533 . + . ID=g3450.t1.exon4;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 1467 1533 . + 1 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 1679 1771 . + . ID=g3450.t1.exon5;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 1679 1771 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 1991 2081 . + . ID=g3450.t1.exon6;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 1991 2081 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 2403 2656 . + . ID=g3450.t1.exon7;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 2403 2656 . + 2 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 2908 3045 . + . ID=g3450.t1.exon8;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 2908 3045 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 3172 3258 . + . ID=g3450.t1.exon9;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 3172 3258 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 3493 3633 . + . ID=g3450.t1.exon10;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 3493 3633 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 3853 3981 . + . ID=g3450.t1.exon11;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 3853 3981 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . exon 4273 5221 . + . ID=g3450.t1.exon12;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . CDS 4273 4533 . + 0 ID=cds.g3450.t1;Parent=g3450.t1 NODE_187_length_32874_cov_39.4519 . three_prime_UTR 4534 5221 . + . ID=g3450.t1.utr3p1;Parent=g3450.t1 #PROT g3450.t1 g3450 MATREQTQLAYQCLRNGADDYFLKPIRMELVNGVWQNVWRKRKEKKVLAMLDEERLKRKQMEELIGELQDRVTLAVETPIHLITRTVAGLLQNDSMSEEARSALAGIMNSLKSSNLYQPAFEKVLTAWEVDAETKSWLTNEVFRDARELGTLEKQPLGRSESGVSLSGTSTEAVNIVTRRATTAGMPELQVDGEETWLTSEGLGRWDFDVWSFGEDDLVRNVLGMFVDLDLVQHFQIPWGNLVSLVRSIRSGYLKNPYHNFRHGFDVAQACYLFLTTTKARDHFTPLETLGLILAALVHDIEHPGVNNVFHINTESPLALRYNDQSILENFHCYRAFCVFKKPENNIFVNMPTGSYKQLRHYIIACVLATDVARHMDILSRFNATIPSFNKDNARDRELLLEILIKCGDVSNPMRPFHLAKYWSDMIQEENFLQGDQEKKLGIPSSPFMDRENPQQAKMSVSFIDFIVAPLFRSVSKVVPAIEECLPALAATREYWHTILLEKEKQKTEVLLGPIVGPAP* # ORIGINAL: g3455.t1 original gene structure, not modified by PASA NODE_187_length_32874_cov_39.4519 AUGUSTUS gene 26945 30252 . + . ID=g3455;Name=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS mRNA 26945 30252 . + . ID=g3455.t1;Parent=g3455;Name=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 26945 27130 . + . ID=g3455.t1.exon1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 26945 27130 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 27324 27436 . + . ID=g3455.t1.exon2;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 27324 27436 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 27637 27859 . + . ID=g3455.t1.exon3;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 27637 27859 . + 1 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 28248 28373 . + . ID=g3455.t1.exon4;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 28248 28373 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 28564 28647 . + . ID=g3455.t1.exon5;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 28564 28647 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 28849 29031 . + . ID=g3455.t1.exon6;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 28849 29031 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 29264 29336 . + . ID=g3455.t1.exon7;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 29264 29336 . + 0 ID=cds.g3455.t1;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 29516 30252 . + . ID=g3455.t1.exon8;Parent=g3455.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 29516 30252 . + 2 ID=cds.g3455.t1;Parent=g3455.t1 #PROT g3455.t1 g3455 MYRLRALAPLARSVGRSVNSTVLPTRSYATAKDIKFAAEARGLMLQGVNKLADAVAVTMGPKGRNVIIEQSYGSPKITKDGVTVAKAIELKDRYENVGARLVQDVASKTNDIAGDGTTTATVLARAIAREGFKSVSAGLNPLDLRRGIQSAVESVVKSLKDLSRPVTTPEEIAQVATISANGDKEIGNLISNAMKTVGRHGVITVKDGKTLNDELEVTEGMKFDRGYISPFFITNPKTLKAEFQDAYVLLSEKKISTIEQIIPALEIAASQRKPLVIVAEDVDGDALSTLVVNKIRAQLQVVAVKAPGFGDNRKNILHDMAVLMGGQVIGEDEVLGKLEQITPEMLGRVGEVNITKDDTLFLKGSGNKKAIEERCDLIRGQIEETSSEYEKEKLQERLAKLSGGVAVLKIGGASEVEVGEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIKGLELLKPANFDQEVGINIVRAALKAPCHTIATNAGVEGSVVVEKVLSSKDAAFGYDASVDQYVDLIKAGIIDPTKVVRTALVDAAGVASLLITSEVMIVDLPKDEKSAGGPGMGGMGGMDY* # PASA_UPDATE: g3451.t1, single gene model update, valid-1, status:[pasa:asmbl_2889,status:12],[pasa:asmbl_2890,status:12],[pasa:asmbl_2891,status:12],[pasa:asmbl_2895,status:12],[pasa:asmbl_2896,status:12], valid-1 NODE_187_length_32874_cov_39.4519 . gene 5646 10881 . - . ID=g3451;Name=g3451.t1 NODE_187_length_32874_cov_39.4519 . mRNA 5646 10881 . - . ID=g3451.t1;Parent=g3451;Name=g3451.t1 NODE_187_length_32874_cov_39.4519 . exon 8782 10881 . - . ID=g3451.t1.exon1;Parent=g3451.t1 NODE_187_length_32874_cov_39.4519 . CDS 8782 10881 . - 0 ID=cds.g3451.t1;Parent=g3451.t1 NODE_187_length_32874_cov_39.4519 . exon 7244 8634 . - . ID=g3451.t1.exon2;Parent=g3451.t1 NODE_187_length_32874_cov_39.4519 . CDS 7244 8634 . - 0 ID=cds.g3451.t1;Parent=g3451.t1 NODE_187_length_32874_cov_39.4519 . exon 5646 7158 . - . ID=g3451.t1.exon3;Parent=g3451.t1 NODE_187_length_32874_cov_39.4519 . CDS 5646 7158 . - 1 ID=cds.g3451.t1;Parent=g3451.t1 #PROT g3451.t1 g3451 MSSVGGGSLITADNIFDDQDEDNNMDDPNEELSAFERALVHAKTGLFGVLFIIAKQVEQNSLFVVVEIIIDFLQVLSFTLADTFSWNESWIGWLSTATRISRFHWYLEIGPSVTQALFFIALATVMLALVNAAYVGVTFSRGKRLNLLLVRTLRSTAGIIATVLFLPLIDIFASRFAVCGVGHLQVDNAACSWQGAEVIIKVVAIIAIILLTTLSLAIEATFFDESPESKGILSRPHARIDVVYLLYKALISILDSVLNLDQAKPQWVFVAILTAGSFFFAYLYTWYPAYYRFGFAKFRATVMWCLAWASVALVCVQIANNKNSNSGPILFYVGLPLAALAGALAISERRRHILGKDVFLISSPYEIELKVRFMLEPLVNKRRRATAGLDQHENDAKTEEDLTDSKLVAQAGDVYRKALRTIGNNSILLVFQSQYFYATAHNTVLGARALAKASRSAPFHLDEQFFVYRRQQMCQEYFSSNASESRDVIMYMTLMQSIQTVRRVEGKCLRAQSAFWNELLTARPDSTRLRGISSIINENIALGQKSFRTLLRLSPESPQVCRMYANWLGTVMYDQDKKVKYLNRAAVLESGVIEAEGHDAGGGALSMFKGVGRLDLDGMRDGSSAVLRLLCDEERLGTVETANAAAMRLFGCTRHDLVGHDFTIILPEPFARAYQSAAQAYIVQGSLDIRGVKNVFFKNKNGYLFPGRLTVKDIPGQGVQPSFIAIAEPIVTGARDHFVLVNSGGYITGCTVNCLALCPDLRVEDALDYNTHISALIPGYDETLAQTMATLSGANASLSSADSDDCGVGATVWESVMSTSVSDECNVRVVRILTADQSGSQLAATYGNVYPAIPQKGNSDSLCDSFEGTRVRDASAAWSAIDPFGRIAPRPSNGGQAMPMAPKTVRASSVRFTGGGGSMKRRVSLTLSEGTAPECHEMTPLSTPSSPPETVAIVLDEIAIPHAMPDTDGDGDGKNGTDSNESGADGYERRPHSQPMPPLERSPPVSKSNVAHEDALQGKVANEYASQERTEMRGNRIKRDDADDGQSSASGRSNSSVKRVNTLRRLLVETNNRGLSPVLRTFRTVVIFSLTALIAMAIAQYVIEKRQVTDFEDSFDVLRTVGDIRFDAISAGLNARFLSVANNGLKPSSQIPLYRDGLLVASEGLDSGYKRIMERLPKMSARHRKLYQSLSLNFTIGFDLAALKSTMRELTLAEALKMNIAQIREVLTSNITGLSAGSLLFLLPLLNGLDISSMSKTMNASAGYTRAEVNDSIDDMGRKSLAVSSAGLAVVVALSLFVMLPTIVYVERTSENTLRVFEKVPRDTIRKMRSRCEKKVKALQEEGNSSSDEDSDDDWSGGERGGRRRAPKVDVVQRTMVFTRSWKYIATIALKISAFFVIGIVFFSLTYNFGFVSIEKDLRENAVRVNYATYIRTSVRSVLWSTYDTSSGLTQGSVLAGIINTARYEINEINRGLEIGSSVFEIPPHGSLSSAQNTLIYDNACTVLSVVAADPSLRNECESVGTGIFRNGLSQAVLWYITRITELYVVAGPNFTVGLDSFRFLNRKDVVELERLERQFLQPALEQSVNEYTAQMRDTIDRRNATVLALLIAFIILSVVSYVAIYHRLIRSLDVEMKRTRAMMLMLPDDILGRMTWLDAYATKLAGGRRL* # ORIGINAL: g3456.t1 original gene structure, not modified by PASA NODE_187_length_32874_cov_39.4519 AUGUSTUS gene 31275 32838 . - . ID=g3456;Name=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS mRNA 31275 32838 . - . ID=g3456.t1;Parent=g3456;Name=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 32022 32838 . - . ID=g3456.t1.exon1;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 32022 32838 . - 0 ID=cds.g3456.t1;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 31725 31853 . - . ID=g3456.t1.exon2;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 31725 31853 . - 2 ID=cds.g3456.t1;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 31448 31546 . - . ID=g3456.t1.exon3;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 31448 31546 . - 2 ID=cds.g3456.t1;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 31275 31315 . - . ID=g3456.t1.exon4;Parent=g3456.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 31275 31315 . - 2 ID=cds.g3456.t1;Parent=g3456.t1 #PROT g3456.t1 g3456 MRPPGASSSPAEPPSPKPSPAPPGPSKPMGPPPPSRAGPPAPPSRTSAPEPSSPGLPKPSAPAPPQRAGPPAPPTRAGPPQPPTPSGPPAKPALPSGGAPPPPARAGPPAPPARAEAPAPPAKAAAPPPPMRAAGGQPAPPARTGPPAPPSRAGPPQPPPRQEEDDDVQPPPPPQRTAAPPPPSRATPAPVPAAAAPPPPARAGPPAPPSRASAPTPPTPVAAAPPPPARAAAAPAPPPPARANAPPPPARGGPPPPPTRAAAPPPQPQYQEEQYDEGSRWQFPTDLPKPELYQNGPKTYPSRQASAPRAGGPPGGAPAPAASRGPPPPAPASRGPPPPAPSRGPPAPGGRGPPPPPPSRQ* # PASA_UPDATE: g3453.t1, single gene model update, valid-1, status:[pasa:asmbl_2897,status:3], valid-1 NODE_187_length_32874_cov_39.4519 . gene 20828 23968 . - . ID=g3453;Name=g3453.t1 NODE_187_length_32874_cov_39.4519 . mRNA 20828 23968 . - . ID=g3453.t1;Parent=g3453;Name=g3453.t1 NODE_187_length_32874_cov_39.4519 . five_prime_UTR 23922 23968 . - . ID=g3453.t1.utr5p1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 23892 23968 . - . ID=g3453.t1.exon1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 23892 23921 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 23690 23740 . - . ID=g3453.t1.exon2;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 23690 23740 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 23303 23413 . - . ID=g3453.t1.exon3;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 23303 23413 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 23046 23111 . - . ID=g3453.t1.exon4;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 23046 23111 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 22407 22877 . - . ID=g3453.t1.exon5;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 22407 22877 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 22012 22191 . - . ID=g3453.t1.exon6;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 22012 22191 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 21514 21732 . - . ID=g3453.t1.exon7;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 21514 21732 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 21254 21346 . - . ID=g3453.t1.exon8;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 21254 21346 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . exon 20828 21107 . - . ID=g3453.t1.exon9;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . CDS 20931 21107 . - 0 ID=cds.g3453.t1;Parent=g3453.t1 NODE_187_length_32874_cov_39.4519 . three_prime_UTR 20828 20930 . - . ID=g3453.t1.utr3p1;Parent=g3453.t1 #PROT g3453.t1 g3453 MLGTRTIAAQLARANGFLAIRSYSAAAPSLKERLSQIIPVKAEEVKTFRKEHGEHPIGTVTIDMAYGGMRGIKGLVTETSLLDAEEGIRFRGYSIPDCQKLLPRGPGGSEPLPEGLFWLLLTGEIPTADQVKQVSRDFAARASIPSHVVQMIKNFPSNLHPMSQFSAAICALQSESKFAKAYSDGVHKAKYWEYTYEDSVDLIAKLPTVAAMIYRNLYRDGSIGAIDANLDWSHNFCNLLGFPDAKFVDLMRLYLTIHSDHEGGNVSAHATHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLVWITKLRERLGNKDVTDEQVKEELWRTLKAGQVVPGYGHAVLRKTDPRFECQRQYAEKHCPNDPLIKLVAQVYRVAPGVLLEHGKTKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLVWDRALGLPLERPKSMTTESLKKIVHAHHSKK* # ORIGINAL: g3454.t1 original gene structure, not modified by PASA NODE_187_length_32874_cov_39.4519 AUGUSTUS gene 25116 26110 . - . ID=g3454;Name=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS mRNA 25116 26110 . - . ID=g3454.t1;Parent=g3454;Name=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 26108 26110 . - . ID=g3454.t1.exon1;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 26108 26110 . - 0 ID=cds.g3454.t1;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 25933 25998 . - . ID=g3454.t1.exon2;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 25933 25998 . - 0 ID=cds.g3454.t1;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 25665 25754 . - . ID=g3454.t1.exon3;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 25665 25754 . - 0 ID=cds.g3454.t1;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 25405 25494 . - . ID=g3454.t1.exon4;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 25405 25494 . - 0 ID=cds.g3454.t1;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS exon 25116 25166 . - . ID=g3454.t1.exon5;Parent=g3454.t1 NODE_187_length_32874_cov_39.4519 AUGUSTUS CDS 25116 25166 . - 0 ID=cds.g3454.t1;Parent=g3454.t1 #PROT g3454.t1 g3454 MSLASRFRPLLNRILVERAIAPQKTKGGVLLPEKAQEMHEAVVVAVGPGLRTSDGKTVATTVQVGDRVLLPEYGVNKLKLDDKEYHLVREDDILGILPK* # PASA_UPDATE: g1214.t1, single gene model update, valid-1, status:[pasa:asmbl_7165,status:3], valid-1 NODE_426_length_23940_cov_41.7001 . gene 10354 12947 . + . ID=g1214;Name=g1214.t1 NODE_426_length_23940_cov_41.7001 . mRNA 10354 12947 . + . ID=g1214.t1;Parent=g1214;Name=g1214.t1 NODE_426_length_23940_cov_41.7001 . five_prime_UTR 10354 10445 . + . ID=g1214.t1.utr5p1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 10354 10490 . + . ID=g1214.t1.exon1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 10446 10490 . + 0 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 10631 10702 . + . ID=g1214.t1.exon2;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 10631 10702 . + 0 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 10882 10940 . + . ID=g1214.t1.exon3;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 10882 10940 . + 0 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 11315 11449 . + . ID=g1214.t1.exon4;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 11315 11449 . + 1 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 11780 11816 . + . ID=g1214.t1.exon5;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 11780 11816 . + 1 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 12090 12192 . + . ID=g1214.t1.exon6;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 12090 12192 . + 0 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . exon 12577 12947 . + . ID=g1214.t1.exon7;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . CDS 12577 12704 . + 2 ID=cds.g1214.t1;Parent=g1214.t1 NODE_426_length_23940_cov_41.7001 . three_prime_UTR 12705 12947 . + . ID=g1214.t1.utr3p1;Parent=g1214.t1 #PROT g1214.t1 g1214 MDNYFDIDSILRTQEYVPVTFATDAMGLGHLDPGSCEADIQSGTKAELPFWLMRPLAKRNFVVAELPKCYGAAHRATLSANPEVVNLQEWCAFYYEFGLAVSDVLKGDDLPVVLKKVFSERYKHVMELAQNSLHEDTLKLTTKLDNFERRLFTAGHDAIAEFHKWRGRKMDKLKASDVAVALRKRKRSAIEG* # ORIGINAL: g1212.t1 original gene structure, not modified by PASA NODE_426_length_23940_cov_41.7001 AUGUSTUS gene 818 6155 . + . ID=g1212;Name=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS mRNA 818 6155 . + . ID=g1212.t1;Parent=g1212;Name=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 818 1045 . + . ID=g1212.t1.exon1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 818 1045 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 1325 2923 . + . ID=g1212.t1.exon2;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 1325 2923 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 3121 3492 . + . ID=g1212.t1.exon3;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 3121 3492 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 3676 3819 . + . ID=g1212.t1.exon4;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 3676 3819 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 4098 4394 . + . ID=g1212.t1.exon5;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 4098 4394 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 4628 4783 . + . ID=g1212.t1.exon6;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 4628 4783 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 4990 5696 . + . ID=g1212.t1.exon7;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 4990 5696 . + 0 ID=cds.g1212.t1;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 5885 6155 . + . ID=g1212.t1.exon8;Parent=g1212.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 5885 6155 . + 1 ID=cds.g1212.t1;Parent=g1212.t1 #PROT g1212.t1 g1212 MAAAVTQAKVAGVLSLLTSLRENKLAEFESQVLPEHNTWLEEVAAETRKMFHTDSICLPKTPSAKRKRVARTRAQKDKENAPVESNPAAGGRVTRARAKVSVAPVPVATLPASVEALDVVMGESAPDAPATVEQEAPRKTSSRNKQEKTTDKTEKKPSPKRRRTDEKEETAVVPSAIAVDAACESFTVAIAVTVENTIAVEMQPISAAVAEHAPVASESEPADVAMVMESDVTPAVCEPVSVAVEMEAKAPAPKRGRGKRAAAAPADDSAEVKATTTTTAAAARGRGKRQKTVLVEPSEGVSAAPDCGRITGSNPAAAADCADASAKEADAPVAAMTPPHAANDTFESSALLSHADVAVVGEDLSVSVCKVNTMVQFWETKATKTPAKEDKKAPAPPTAAAASSATATAAQPTIAAAPAPRGKKRLGKATVAAFGSPDGLAIAAPALALSSVGGVAAGNSGVEKKLEVLLSPVKKGEEIKVAIPPQPELPAPKRAPRKAKVAATPAVSVVEAAAIPPVVYVPAIAVDTSIGVQGVAETPVDVPSNEAKAKDADAYLGMKRDVMKLSHGNKRRKPSRAHTRVQEAEVDAGITAVAAEDAAAPVPMEVIHEVPALPAPVAVAPTIPAHVEEVHVVAQPIKDSAMEVDESEGAFSTHAGSSDNPAPLSLSQEVAPFETALNDDDAVQNEVEDMLAEDVSQMDAVGATTPEERTIARPMHKPITVVTSVRSAIQKTQGPANLITGTSFVASLQKQQQLQREAEAKTAQKSVPQVKALKAAEAAKKAAERKAEEKRAQQAFFAKEKERRQAEKQTAPSIQTNTNTNANGNTSLLNSSVNLTKSSSAASITSTAATIVPAQPKVVAPVPVAAAAAAPVAVKAVPVVSVERGPAQAPPQSVVVYPAVAVSSLVKTPTMPAETPLAAPKTATTTPVDQQQPSSAPAKRNYEEQERLLLQKLAERQKQQADRYASQQQPQSQSQTQQQAPAATVPASSAVSVASSSPPVVVSVQVKAPAPQPEITRAAPTAAAVPPQVQQQSVPKAIISSSVPVAGPIPLATPAVAAVGGKTASSSSSIPVATSQQPSRNIIKLTVQPMDASKGASVQQKSAPAAAMATQPQNAVPQPQQIQRSPVGAAGGLLNDDNSYMLTPEYKAQKRDERTSDETYNIDDLDSGESTDDDEAPRRKIPSWAQGPALKAAIYNQHLQRMDPDDMFPRVQTPDLNVIFPNGKRKNERYVRRGSSAQWAMEQSPTAPSGARPKKML* # PASA_UPDATE: g1215.t1, single gene model update, valid-1, status:[pasa:asmbl_7164,status:12], valid-1 NODE_426_length_23940_cov_41.7001 . gene 13510 15504 . - . ID=g1215;Name=g1215.t1 NODE_426_length_23940_cov_41.7001 . mRNA 13510 15504 . - . ID=g1215.t1;Parent=g1215;Name=g1215.t1 NODE_426_length_23940_cov_41.7001 . five_prime_UTR 15431 15504 . - . ID=g1215.t1.utr5p1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 15340 15504 . - . ID=g1215.t1.exon1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 15340 15430 . - 0 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 15019 15187 . - . ID=g1215.t1.exon2;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 15019 15187 . - 2 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 14827 14863 . - . ID=g1215.t1.exon3;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 14827 14863 . - 1 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 14624 14692 . - . ID=g1215.t1.exon4;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 14624 14692 . - 0 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 14376 14459 . - . ID=g1215.t1.exon5;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 14376 14459 . - 0 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 14013 14219 . - . ID=g1215.t1.exon6;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 14013 14219 . - 0 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . exon 13510 13793 . - . ID=g1215.t1.exon7;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . CDS 13701 13793 . - 0 ID=cds.g1215.t1;Parent=g1215.t1 NODE_426_length_23940_cov_41.7001 . three_prime_UTR 13510 13700 . - . ID=g1215.t1.utr3p1;Parent=g1215.t1 #PROT g1215.t1 g1215 MGRAICIAVAVLAVACVASARPFTAHHPPNGPDLWTVKLVDKANNNFMFRGDLPLKNDTIFAYDDLVAALRTTEPTLPEKFHLVDIALQWSYVADKHNWIVTEQKFFEDNPDKGEFIHWPLYGDLVNPNLLPMAMRESLGKSLLSWQVDKLPDKVLQLNTMLNTAYDVPRVFYYHCHTGVDRTGEMSISYEISMQKKLFSASLTASDALDEYVNGRKLTFVNSNAAAWFCYYLRFNKIGDASLLDCEAR* # ORIGINAL: g1213.t1 original gene structure, not modified by PASA NODE_426_length_23940_cov_41.7001 AUGUSTUS gene 7745 9436 . - . ID=g1213;Name=g1213.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS mRNA 7745 9436 . - . ID=g1213.t1;Parent=g1213;Name=g1213.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 7745 9436 . - . ID=g1213.t1.exon1;Parent=g1213.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 7745 9436 . - 0 ID=cds.g1213.t1;Parent=g1213.t1 #PROT g1213.t1 g1213 MAQQQQQQQQQQQQQQQQQRAQFGLQGLIDPSLLSLLSTAPLRQGNRANESPSSAHQAHTPTRGGSTAPSLPGLLSFGQDPSLDSGLFDGSGLVPHHQGTQATEQSKGAHSLPFLPLFGGAALHANRPIASGTDIPAHNLGGLYGLPQLPSLPPLSVDGDAVGGNVNPFDPSALLDAQQQLQLRFFHLQQQYQLAAQQAAQAQAQADAHAQAQTRSENERRTAVSRAAAARDAEIAEIDRRNEIRAIASKRKPAKRKAGDHPDTHSRPAKVSMSKEGPVSIAPLLPKGARHGSGTPTQQRVGMPVAAVDDYGNSVGGTVAPALVMPPFPPTPGGGVVPLSSPDTGLYGSVGGAPLTAAADYGRDGGNLFSTAAAAAVEQRRQSGRIDSVDFSDVLSTDSARKGRRRSVPRSNIDTQALRRIRERNKTAAAKSRLKKKTREEELKWRATESARRNASLKAQITRVETDIAEHRNRLREKTGRTSSLTEVAPDQGVPPSVISPPGRVVTGGEGGGIGGEGASASDDGSACGDGSVTVSNASSGVSASDGESGSSASSGGDGRGTT* # ORIGINAL: g1217.t1 original gene structure, not modified by PASA NODE_426_length_23940_cov_41.7001 AUGUSTUS gene 17744 23043 . - . ID=g1217;Name=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS mRNA 17744 23043 . - . ID=g1217.t1;Parent=g1217;Name=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 23033 23043 . - . ID=g1217.t1.exon1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 23033 23043 . - 0 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 22781 22890 . - . ID=g1217.t1.exon2;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 22781 22890 . - 1 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 22391 22624 . - . ID=g1217.t1.exon3;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 22391 22624 . - 2 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 20633 22164 . - . ID=g1217.t1.exon4;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 20633 22164 . - 2 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 19931 20299 . - . ID=g1217.t1.exon5;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 19931 20299 . - 0 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 19211 19706 . - . ID=g1217.t1.exon6;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 19211 19706 . - 0 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 18785 18909 . - . ID=g1217.t1.exon7;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 18785 18909 . - 2 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 18513 18581 . - . ID=g1217.t1.exon8;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 18513 18581 . - 0 ID=cds.g1217.t1;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 17744 18340 . - . ID=g1217.t1.exon9;Parent=g1217.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 17744 18340 . - 0 ID=cds.g1217.t1;Parent=g1217.t1 #PROT g1217.t1 g1217 MAQRRAPITTSGWYVKPEAASSSGPPSSQDTCALQSTETAAPIDFGEWTIGGKCEALFKADGKYYEATISNLRPSAKGTRAIAEVIFRGFETDGPYAIKLSHIRKQRTWREKKDVDSIGLPGSPRRAKRTASIDGTNSASALAPSRSALRGAAAADSDASTGLESEDESDRRDRRFLLGWDDQRRERSRDADREGGKSGPGSSESRESRRLTAAPDTRATKRKAGDALASVDEFDDGGVVDGAGSTHSESGGHGRRIAPVEGGVVLKRRRYDTGRHGTLGAPVLNPDGHSHVGRGEGLAPNDSVGSGSGVSSAANQVDSGSRLRHAFSTNGDTSQRDITGEKPEFNVEPQGPKEPLVIKDATDSTLATVPASMNWHLRDYQRDGIRFLYRLYANGKGGILGDDMGLGKTVQVICFLAAVFGKTGHSVDEMRRPVDRRPVLIVAPTTLLANWKREFDTWGYFTIGTYHSSSKKMADVLGKASSGSLEIVLTTYETARNNLEALNSAANWRCVIADEAHRLKSPDTQTTREFMGIAIGSPRFGLTGTAVQNTLAEFWCLLNWANPDEFMSKDSFMEVIVKPIGHGQRYGAGLDAVFKGRQASIAFNRLTAWCFLRRTKKLIADQLPKKEDKVIFCPLTDIQKMVYRRTIELPQLQRFLDDTIELEESDKEYLLPCILWLQKISNHLLLMLPKFTDSPEIEAKQNALCDKIFVDCPQFRDRLEVMNKITMGDPTGCGKLQVLQKLLPKWKEDGSKVLIFSYSLQVLNVLESFLCANGYSYGRLDGEVQSKDRMAIVDEFNNGLGMFAFVLSTRVGSMGLNLTSANVCVIFDPNWNPALDLQAQDRAFRIGQLRNVTVFRLISAGSIEELVYARQIYKQQLSSIGMHGSVAERRYFDGVANDRRHQGELFGIKNLFSLNVNRLITQDIIQRTEETENMYAIANYELNVDATPAPQLDESVDKKNGEHFTGVASVLEGIVADSQERRSQGTASQPPQQERSNPATRPIGVQSTLSDILDECGVEYAHANEQVLEPSRMEADIGRIAALTMPEDPLRGLGKSGRGRGRGRGRPRKDSRAGGSVGPGQSSSPAHTGRPSVPALALQQHRPVHEERGGLGVLDAEDAGVRAVDGDGTSASPVNNERRAQFARMGASMGYSSLYEFAQRVSSCDAAERQQMLDTFYAWA* # ORIGINAL: g1216.t1 original gene structure, not modified by PASA NODE_426_length_23940_cov_41.7001 AUGUSTUS gene 16122 16910 . + . ID=g1216;Name=g1216.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS mRNA 16122 16910 . + . ID=g1216.t1;Parent=g1216;Name=g1216.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS exon 16122 16910 . + . ID=g1216.t1.exon1;Parent=g1216.t1 NODE_426_length_23940_cov_41.7001 AUGUSTUS CDS 16122 16910 . + 0 ID=cds.g1216.t1;Parent=g1216.t1 #PROT g1216.t1 g1216 MVATCIVPGCPTNSLRFRRSIESQGLHFSSFRLPSKNEPAERLRWLRVCGRTDLADKDKGDLRVCARHFENGVRGDIPTLDLPAPRDPNAPLPAAGAPSAPAAPTPAGVVTPALAATAAAAAVTPVKTVADGRVQKKRGRPPMSAKVVSRGLVDVLANAAAQQSPLHDPKAAVEIKCVSEKCRVEMEKLKAALAKEKELRLVDREAAVAALMKAQSAGAVAGSGAAAQAEIARLLEENARLNRELEQSRISKDVQSICDCED* # ORIGINAL: g9969.t1 original gene structure, not modified by PASA NODE_4007_length_2364_cov_170.25 AUGUSTUS gene 2 2364 . + . ID=g9969;Name=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS mRNA 2 2364 . + . ID=g9969.t1;Parent=g9969;Name=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS exon 2 403 . + . ID=g9969.t1.exon1;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS CDS 2 403 . + 2 ID=cds.g9969.t1;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS exon 1183 1265 . + . ID=g9969.t1.exon2;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS CDS 1183 1265 . + 2 ID=cds.g9969.t1;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS exon 1461 1761 . + . ID=g9969.t1.exon3;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS CDS 1461 1761 . + 0 ID=cds.g9969.t1;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS exon 1961 2364 . + . ID=g9969.t1.exon4;Parent=g9969.t1 NODE_4007_length_2364_cov_170.25 AUGUSTUS CDS 1961 2364 . + 2 ID=cds.g9969.t1;Parent=g9969.t1 #PROT g9969.t1 g9969 SQSWYIFGGDPSKATFDPENFDDVEGLLQHAATGRDNALPMSYKLIPISRILKAEKFPGLALFEEKRAYLIETMENVCVADGAACSFEDEQSESAVRYGDLVNLSAGTDNQDYSICIGSNSNQVTARPTGDKALEAKDAFQIVSPFRSLIDRFGTTRLPPPLRYGEGVYFLSAQQGYFTYDNSAGTLVAQLPKPFDVTVQHNTPTTKVIIRHPTKVAGEIVRFGDEAFFDLQVSTIAPNEHPWFDGSDILRLAISLVGQLQPANLVPMAIWLQAPLTAVLQQVKDRFYIRRPPRGNAILTQESATDAITVTLSTAISNDDLHNVVLTLTFNTFVSRNASFSSARNVDLIESSNERRTLVSSDVTVYLRRGSRVVYPEKKRTVPYGRSRLRISLELT # PASA_UPDATE: g7860.t1, single gene model update, valid-1, status:[pasa:asmbl_661,status:3], valid-1 NODE_1178_length_13356_cov_41.866 . gene 3977 8025 . - . ID=g7860;Name=g7860.t1 NODE_1178_length_13356_cov_41.866 . mRNA 3977 8025 . - . ID=g7860.t1;Parent=g7860;Name=g7860.t1 NODE_1178_length_13356_cov_41.866 . five_prime_UTR 7846 8025 . - . ID=g7860.t1.utr5p1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 7351 8025 . - . ID=g7860.t1.exon1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 7351 7845 . - 0 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 7003 7210 . - . ID=g7860.t1.exon2;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 7003 7210 . - 0 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 6707 6847 . - . ID=g7860.t1.exon3;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 6707 6847 . - 2 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 6034 6583 . - . ID=g7860.t1.exon4;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 6034 6583 . - 2 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 5697 5829 . - . ID=g7860.t1.exon5;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 5697 5829 . - 1 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . exon 3977 5522 . - . ID=g7860.t1.exon6;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . CDS 5268 5522 . - 0 ID=cds.g7860.t1;Parent=g7860.t1 NODE_1178_length_13356_cov_41.866 . three_prime_UTR 3977 5267 . - . ID=g7860.t1.utr3p1;Parent=g7860.t1 #PROT g7860.t1 g7860 MAAPHPQAHAYGHSHNAASVSVSASPAPSSNGSSAAGALVDSSLATIMRLLTLEYTSPTDVEPRWKRFARDKRRDLAWVEKKRLDNAIWRAWNLWRLRGRTTPFFDFERSLRGALASKVDETHPNTGNAIAMTGVTTAAGDGHWERKLEAIKTEYASWRAWYKRQVSRRLKRDAASADSSTADGPFEDGGSSSGASLEEAPPPVGVARIGAFPDTLFSSLDAHAQGPFATLRDIDDPMTIDLAQPNVNVHHLLGTGPLGLELPCFAPDSWIHVGVPHDLLRGIFREAGMNTDRSRPGLVPLLPAQTTPTFNPFAHPSTLGVLGHVSTPMGLQGLLQHQHLGQAASAGVYDPGMGGLGSLPDGMGGVAVLGTAGGGGGGLMEAGGRRSSHIVAEQKRRNHIRSGFDDLQAIIPGCQTRLPNQKFSKATILQKAIDFISQLTRQKSLLNDESSRTRREICALKLSINQYQQHLAALEDSASLPTESSVDATTTLYRDYMRRRSAQDIKFWIFSTIADQLFETYNRVVHVAHLEALSTSAFAWIDQHCQLPTLRDCAVRSLRALAVCLFPGQAGLPLGVPLVAGAGVGLGMPGLLR* # PASA_UPDATE: g7862.t1, single gene model update, valid-1, status:[pasa:asmbl_662,status:12], valid-1 NODE_1178_length_13356_cov_41.866 . gene 10734 12818 . - . ID=g7862;Name=g7862.t1 NODE_1178_length_13356_cov_41.866 . mRNA 10734 12818 . - . ID=g7862.t1;Parent=g7862;Name=g7862.t1 NODE_1178_length_13356_cov_41.866 . five_prime_UTR 12817 12818 . - . ID=g7862.t1.utr5p1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . exon 12643 12818 . - . ID=g7862.t1.exon1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . CDS 12643 12816 . - 0 ID=cds.g7862.t1;Parent=g7862.t1;5_prime_partial=true NODE_1178_length_13356_cov_41.866 . exon 12346 12459 . - . ID=g7862.t1.exon2;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . CDS 12346 12459 . - 0 ID=cds.g7862.t1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . exon 12062 12190 . - . ID=g7862.t1.exon3;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . CDS 12062 12190 . - 0 ID=cds.g7862.t1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . exon 11319 11954 . - . ID=g7862.t1.exon4;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . CDS 11319 11954 . - 0 ID=cds.g7862.t1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . exon 10734 11113 . - . ID=g7862.t1.exon5;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . CDS 10997 11113 . - 0 ID=cds.g7862.t1;Parent=g7862.t1 NODE_1178_length_13356_cov_41.866 . three_prime_UTR 10734 10996 . - . ID=g7862.t1.utr3p1;Parent=g7862.t1 #PROT g7862.t1 g7862 SENDVGVPLPVVAAAAALERSMEAMDGAMGAVKVGALGTALDNDVRERLLAFVREERERALRLAAAAEEEVEEIHADGRSRGAGGYLMSTGLRPPRLDNFVDCSDDINDGEGDDSLEYTCDAYDPNDLALRLQGRGWIAGSAENAPSKDSSGVVDRNHMQGSGNDSCPDSLDDYSNAPNVHVADTTLFDSETALRRMELRITASHAHHVTAAAAADVYDILGDVSDDEADDDGGHGDGAVGSSVPAECAGEPLLSDALEPDATSRPLAPQEATHPPMAEAGWSPPEHRIDGSDDDDACLQCDVVDGDDHTQDDCARDDPQPKRSALDYAAKYAAEINALLEEERQRGNVELDPPTFDAIEAFSLEDDFDYDGVTCAPREFPYAMPMPRS* # ORIGINAL: g7859.t1 original gene structure, not modified by PASA NODE_1178_length_13356_cov_41.866 AUGUSTUS gene 3128 5163 . + . ID=g7859;Name=g7859.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS mRNA 3128 5163 . + . ID=g7859.t1;Parent=g7859;Name=g7859.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 3128 3175 . + . ID=g7859.t1.exon1;Parent=g7859.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 3128 3175 . + 0 ID=cds.g7859.t1;Parent=g7859.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 3811 5163 . + . ID=g7859.t1.exon2;Parent=g7859.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 3811 5163 . + 0 ID=cds.g7859.t1;Parent=g7859.t1 #PROT g7859.t1 g7859 MHTTAGPSSDVVTANEPITGEPRFFPHSDDSAAGVGACSSGDGRVHLAAAQDGRHAAVMLGGGISTSISTEPPDQGPLAPEFDGTSNANKHGQMGLTPGLPPMHSNDKINDGINPAGMDAISVQVTSAEGSSGGGSGETSTAVSGVLAGEEAQGGEKHNAYHNTVARADVQDAGVCDSVSVALQTTVAIGCMRSDEGDGHEAHREPNQHPATPSLSGHPAEAIDSTVAQKDTSSHHVHARSQFAEFESIESIEGDEGDEGGQHKREQSSAPDATNSETIATTAHADVGGNSNQISVFTETGSASSPAPTTFDALTSGDRDATEPMKGVDASPTVAPTDSTPTATAGCVVCRQPVKCVCACGRAFCSTACQAADWGTHRSECSATAAAAAATLAQPVHDAEGHVKGAAIAGRRPAAPVPVHREPCAKCGRPTVHMCSRCKSVRYCSIKCQTEQWSEHKRMCGVSPAL* # PASA_UPDATE: g7857.t1, single gene model update, valid-1, status:[pasa:asmbl_659,status:12], valid-1 NODE_1178_length_13356_cov_41.866 . gene 46 432 . - . ID=g7857;Name=g7857.t1 NODE_1178_length_13356_cov_41.866 . mRNA 46 432 . - . ID=g7857.t1;Parent=g7857;Name=g7857.t1 NODE_1178_length_13356_cov_41.866 . five_prime_UTR 273 432 . - . ID=g7857.t1.utr5p1;Parent=g7857.t1 NODE_1178_length_13356_cov_41.866 . exon 240 432 . - . ID=g7857.t1.exon1;Parent=g7857.t1 NODE_1178_length_13356_cov_41.866 . CDS 240 272 . - 0 ID=cds.g7857.t1;Parent=g7857.t1 NODE_1178_length_13356_cov_41.866 . exon 46 135 . - . ID=g7857.t1.exon2;Parent=g7857.t1 NODE_1178_length_13356_cov_41.866 . CDS 46 135 . - 0 ID=cds.g7857.t1;Parent=g7857.t1;3_prime_partial=true #PROT g7857.t1 g7857 MRDRLKDLKNAATTAPEGDTVIDTGAADDGGEQFMASFFQT # PASA_UPDATE: g7858.t1, single gene model update, valid-1, status:[pasa:asmbl_660,status:3], valid-1 NODE_1178_length_13356_cov_41.866 . gene 1141 2846 . - . ID=g7858;Name=g7858.t1 NODE_1178_length_13356_cov_41.866 . mRNA 1141 2846 . - . ID=g7858.t1;Parent=g7858;Name=g7858.t1 NODE_1178_length_13356_cov_41.866 . five_prime_UTR 2433 2846 . - . ID=g7858.t1.utr5p1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . exon 2261 2846 . - . ID=g7858.t1.exon1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . CDS 2261 2432 . - 0 ID=cds.g7858.t1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . exon 2080 2176 . - . ID=g7858.t1.exon2;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . CDS 2080 2176 . - 2 ID=cds.g7858.t1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . exon 1761 1994 . - . ID=g7858.t1.exon3;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . CDS 1761 1994 . - 1 ID=cds.g7858.t1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . exon 1553 1660 . - . ID=g7858.t1.exon4;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . CDS 1553 1660 . - 1 ID=cds.g7858.t1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . exon 1141 1454 . - . ID=g7858.t1.exon5;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . CDS 1307 1454 . - 1 ID=cds.g7858.t1;Parent=g7858.t1 NODE_1178_length_13356_cov_41.866 . three_prime_UTR 1141 1306 . - . ID=g7858.t1.utr3p1;Parent=g7858.t1 #PROT g7858.t1 g7858 MIEIQATMSQRAIELLNLPDDEPRFILDVGCGSGLSGEELTDAGHYWVGLDISPHMLDVAVERESEGDLFLQDMGQGLSFRAGTFDGVISVSALQWLCNADKKEHVPHKRLLKFFSTLYAAMARGARAVFQFYPQDPEQMEMITAAAMRAGFTGGLVVDYPNSTKAKKIFLCLFAGIVGELPRALGDGDNEEDAPKSVAFTAARRDYSKRDGNRLHPKSKQWIKEKKDRRRKQGKEVQEDSKYTGRKRKIRF* # ORIGINAL: g7861.t1 original gene structure, not modified by PASA NODE_1178_length_13356_cov_41.866 AUGUSTUS gene 8243 10590 . + . ID=g7861;Name=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS mRNA 8243 10590 . + . ID=g7861.t1;Parent=g7861;Name=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 8243 8371 . + . ID=g7861.t1.exon1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 8243 8371 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 8598 8706 . + . ID=g7861.t1.exon2;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 8598 8706 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 8839 9017 . + . ID=g7861.t1.exon3;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 8839 9017 . + 2 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 9203 9367 . + . ID=g7861.t1.exon4;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 9203 9367 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 9568 9744 . + . ID=g7861.t1.exon5;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 9568 9744 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 9980 10222 . + . ID=g7861.t1.exon6;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 9980 10222 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS exon 10375 10590 . + . ID=g7861.t1.exon7;Parent=g7861.t1 NODE_1178_length_13356_cov_41.866 AUGUSTUS CDS 10375 10590 . + 0 ID=cds.g7861.t1;Parent=g7861.t1 #PROT g7861.t1 g7861 MAEFATTTTDLARSDPERPSFFELVAQDGMMTMLKPALRYFLTILAQRRPQWFGRFFALHEELYGALALVVQWHHLATYDGSFAEVFYGLKRVPVSSLSAAVPNSTTPHGAHHVTMRVEAQASSPPLTHRQRLASLFFLVALPYVKTKLDAWYEAASRRTTPLMTNAGVASGASNDSRNPDTEAEDGGRAAPDAGVRSLPSSAALNAYPFVHAAWEGLHFVHQIAYLFGHSVFYSPTLALCGLAIRRMTISDMIGHRRARASRHIGRVAPAGAGLVRRLLQPAVGGAQALLEYSQVILPIAVFFLKFLEWWYNSAEGASSAQPLPIPPPPEAPMCHADGVSLPSDHTVCPLCRRARVNPSVLLSSGHAFCHKCIHAHVDTHARCPVTLIPASVDQIARIYTGTFA* # PASA_UPDATE: g8314.t1, single gene model update, valid-1, status:[pasa:asmbl_6487,status:3], valid-1 NODE_374_length_25548_cov_47.4181 . gene 8420 11474 . - . ID=g8314;Name=g8314.t1 NODE_374_length_25548_cov_47.4181 . mRNA 8420 11474 . - . ID=g8314.t1;Parent=g8314;Name=g8314.t1 NODE_374_length_25548_cov_47.4181 . five_prime_UTR 11265 11474 . - . ID=g8314.t1.utr5p1;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . exon 10427 11474 . - . ID=g8314.t1.exon1;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . CDS 10427 11264 . - 0 ID=cds.g8314.t1;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . exon 9384 10183 . - . ID=g8314.t1.exon2;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . CDS 9384 10183 . - 2 ID=cds.g8314.t1;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . exon 8420 9212 . - . ID=g8314.t1.exon3;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . CDS 8649 9212 . - 0 ID=cds.g8314.t1;Parent=g8314.t1 NODE_374_length_25548_cov_47.4181 . three_prime_UTR 8420 8648 . - . ID=g8314.t1.utr3p1;Parent=g8314.t1 #PROT g8314.t1 g8314 MSRGLWIGSDWQPTGCMLRPIGEVEVAKCFPNGGRIAIVGDSRSRQLFHALVLRLNPNASPLPNTTYDHGTLRIEYHRETAVWNSTVKLLYDDWSTSLQPPNIVIHNAGLWALKAEGENGVTTFGNDLRWLASMMERVASRSYVVWRYSGALVESKLWEARRRMTNALVQRINEEAESILGEMAPHVHRLESSYSMYAGVPHLSEDGVHYAPSVYNAESDLILNAYCNRERSTPLTWSGCCAHRPAMTPVQTTFIGVSAFVAAMYVVMACSTSQRRTDLDVEAAAHEHATTAATATGFLSSDATRQFIWGCAKMFCVLSYYFVADRTNYFMRSSKHFQGPWWDFYVPFLVIIGVGYAVERANAQRPGFLNREQTEEWKGWMQVVLLLYHAVGASKAMSIYSLARMIVASYLFLSGYGHFSYFYLKNDFSMSRVMQVLLRLNVLVAFMSLTMNLDYQAYYFVPLSTFWFLVVYVVMRVGHDSNRTVAWVVPVKLAGMFAFGAILWYRAADGSMPIADAVFGKWPLRVLFEDHGSTTEWKFRSALDRFVVPVGMLTAYVYIVWVPRLERLAPSTATVMSVAASVAGFFGIFLYFAVSATCLSKQECNAWHPYTSIGAVLGFAWLRNASPQLRTLFSPVFVYFGGISLELFLGQYHILLASDTKGLLVLVPGHPYINALVVSAVFVVASDIASKATGEIVTALFAANKRTLTMGAVVLIALASMLRVLNGVLLPQF* # PASA_UPDATE: g8315.t1, single gene model update, valid-1, status:[pasa:asmbl_6482,status:12],[pasa:asmbl_6483,status:13], valid-1 NODE_374_length_25548_cov_47.4181 . gene 12602 13353 . + . ID=g8315;Name=g8315.t1 NODE_374_length_25548_cov_47.4181 . mRNA 12602 13353 . + . ID=g8315.t1;Parent=g8315;Name=g8315.t1 NODE_374_length_25548_cov_47.4181 . exon 12602 13353 . + . ID=g8315.t1.exon1;Parent=g8315.t1 NODE_374_length_25548_cov_47.4181 . CDS 12602 12994 . + 0 ID=cds.g8315.t1;Parent=g8315.t1 NODE_374_length_25548_cov_47.4181 . three_prime_UTR 12995 13353 . + . ID=g8315.t1.utr3p1;Parent=g8315.t1 #PROT g8315.t1 g8315 MWCILDLSPLGMMHTLWLEGCGNIKDVTPVSDVSLVRLLKVEVSALGSIHGCTLATAKTCPCLVASATCHYYKLQSRCVSAWGEVHTLLIHDMWHITDISRLTAVQSEPPRDASYQSIGAMYVDEYGQHI* # ORIGINAL: g8317.t1 original gene structure, not modified by PASA NODE_374_length_25548_cov_47.4181 AUGUSTUS gene 22335 24985 . + . ID=g8317;Name=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS mRNA 22335 24985 . + . ID=g8317.t1;Parent=g8317;Name=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 22335 22443 . + . ID=g8317.t1.exon1;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 22335 22443 . + 0 ID=cds.g8317.t1;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 22652 23602 . + . ID=g8317.t1.exon2;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 22652 23602 . + 2 ID=cds.g8317.t1;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 23803 24637 . + . ID=g8317.t1.exon3;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 23803 24637 . + 2 ID=cds.g8317.t1;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 24910 24985 . + . ID=g8317.t1.exon4;Parent=g8317.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 24910 24985 . + 1 ID=cds.g8317.t1;Parent=g8317.t1 #PROT g8317.t1 g8317 MTLRRNAYACAKPCRNGYRVTLMGITFSVVCLLIFEVPNSVRAACAPKSCAVPDGYFDIHAYTGYEPSMLASFSTCTSLNGTVVVAASDYTALTFLSCLTSLTGSIWIRQNSKLTSLDALASLTEMEGSMSLEDAPLLESLSGLQNLKKASSLSLINMPALRSLDGVSSMTYVGWDITIIDAPLLTSLGPLSNIDFLGGQVNIENTGIATLDGLATKFLMKSSALYILRLVGNKNLVSVAAMRSVASVSAFLMIDGNDKLTSLEGLDGLRTIDGAGLNGPYPPMDNSKWAIYIAKNAALISIDALKSLSTVKEGGVYIRANPVLCDSLASHWTSAVVSGPSQYINASAGLTCPLTGVSSSKSSSGAIIGAVVGAIGGVAVVVALVVFVRKNGVRLPMFLQVTRRPSTLSEGGSVIGSSRYDVENVGYAERKGSSRYSDIGAASAASLLVNPLRAKSADMSDGAYVELEMMDAVDALYESVDDVAAFLGSWMVPDSLLRRGDVLGSGQFGDVFVGVLPRLPPAANALARTAQDLPWAVAARKGDVVQVAVKSLREGTDKEERAAFVKEALLMARFSHPRVLSLLAVCASSSPDSLLDGECDAVLIATELMPEGDLKGFLTRCRTANPPRLSLHDLMAITIQVAEGIAFIHSKRLVHR* # PASA_UPDATE: g8316.t1, single gene model update, valid-1, status:[pasa:asmbl_6484,status:12],[pasa:asmbl_6488,status:12], valid-1 NODE_374_length_25548_cov_47.4181 . gene 13590 21117 . - . ID=g8316;Name=g8316.t1 NODE_374_length_25548_cov_47.4181 . mRNA 13590 21117 . - . ID=g8316.t1;Parent=g8316;Name=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 20127 21117 . - . ID=g8316.t1.exon1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 20127 21117 . - 0 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 15807 19906 . - . ID=g8316.t1.exon2;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 15807 19906 . - 2 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 15623 15671 . - . ID=g8316.t1.exon3;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 15623 15671 . - 0 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 15298 15475 . - . ID=g8316.t1.exon4;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 15298 15475 . - 2 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 14817 14976 . - . ID=g8316.t1.exon5;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 14817 14976 . - 1 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 14475 14501 . - . ID=g8316.t1.exon6;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 14475 14501 . - 0 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . exon 13590 14248 . - . ID=g8316.t1.exon7;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . CDS 13616 14248 . - 0 ID=cds.g8316.t1;Parent=g8316.t1 NODE_374_length_25548_cov_47.4181 . three_prime_UTR 13590 13615 . - . ID=g8316.t1.utr3p1;Parent=g8316.t1 #PROT g8316.t1 g8316 MVASADNSILGQHGRLSVGVTSRTLLFTLSSAQQLVWSNASEGRTAPIAIRAPALYLGDAYNSIAVDLSGAAVTCDVLGPAALQVSAGTLSLYNFTLDKCVASSPVDSSSALFVALSGSTLHLRDIWLRNLVGVRLVIVNSAFATLDRVQITNAAFSVKDDVQSSNSTCSGGGMLHARGASQVNVTDSQVQEFTCDDCCGALFAANETASLRIISLVARSISAHSGGIVFASDQATVLLDGSILSSIRTLDRGGVLALAGDAVALIRGGGSSVTDSHSREGGVAHLRDSASLRIDALHASNISADKGGLIHMDGAAVADVRGLILDTLSALGDSYITNATADYGGFAMAWGSSSLSVWNTTLAQMSATNDGGTAELSEDTVVTMTGMTILGSSAVVGGVFNMHLNATAHVASSAFVDIAAVGVLGSFGAFANAWGSSFLSASNVTVLRSSASEGGVLSLKESSRAVLVDFEARDVVALNNGGFASMTDDATLHVDALTIKNASAYMAGVAMMYDRTRLFIGGATNRRRRMGTATRVRHDRDNLSHVKTTFTGIRVAGTSSSTSGGIFALRRSAEIHAAGMSEVRDVRVMSGGLASLHDSTRLVWIGLVLTNVSTEYGGAVSMFDSASAELSLVTASDISADSEGGFAYVNEQANVLVTNCTLSLMRSPLGGVVSITDDASVTISSLVANNVYSATAGALLYIYRAAVADLHGLLLDTLSARLGGIIYASGTAHVTVGDSYITNATADYGGFAMAWGSSSLSVWNTTLAQMSATNDGGTAELSEDTVVTMTGMTILGSSAVVGGVFNMHLNATAHVASSSFVDIAAVGVLGSFGAFANAWGSSFLSASNVTVLRSSASEGGVLSLKESSRAVLVDFEARDVVALNNGGFASMTDDATLHVVALTIKNASSYMAGVAMMYDRTRLFIGGATNRRRSMGPATRVLHDRDVFSNASTIITGIQVDGASCSTSGALFALSEAAELRAAGVSAVRNAQAANGGGLVRLIHYSRLVWTGLVLTNVSANYGGVILMFDSTYAKFSYVTALFLEASSEGGFAYVSGKAQLFVTSSLLSHVQSSAGGVILTRDSAYVEMSSVVAADVQAAENGGFACVSGDSRLVMQQCRITGASSEFGGCFLIKDQATLHVDTLDASALRAIYSGAFAILYGTSGAVATGIAISDASASYGAGITMWDATTATIRSSSAVRLFADTYGGFAAMEDYADLALVDVHLEDLSSPVGGLANVWDNAHVRMENVSVLRASASNYGGVVSVKGAGILDAVSLRAENCSSVTYGGFLRTDQTAIVTLTNATLLRTKAATGGCICALGSSTVVLDGGTYAFCRAGADPSTGGLGGVAYVAVLAHLSITSAISVHAPSAILGPAFYMENVIDSASIANTHLDGPLLPSDVEIEGKLPGWRAGGLFASGPHTIIASHDDLRAVSGGQLPPITLEIRDLYGSAVSTDGRRPLAVRISLAVGGAKVASNQSEYALLGDIERSFGSASTVTFQSLRVYAAEAGPYQMVIESSNPFLYGDYDTSPFEKDILKDYKLNVTVDACPAGEVLSRTGKSAPFAECTAIAYSSSDHTLAIALSVCLSLATVGAVIVVAIVRMRFLAAMSRERSHATHVEFVEKHLSKKSDLVVLEIRREDVEVLEKIGSGEFGVVCRARVLADDQPRLCAAKQLKEGASFEERCTFLDEALVMKGLSHPNIVTLCGIVAQDEPILILLEFVPHGDLRAFVQSIPSAHREAGSPSLRMLEAFCKQIACGMAYLVQMRLVHRDLAARNCLVGQDVFGGLRVKVSDFGMSGATGGKEYFRTVGKKERLPLKWLAPEVLQYRKFTHASDCWAFGVTAWETFSFGEAPYAGLSGAAFVSFLNRGGRLQCPQSCPPDIFSGIIAPCWMTAPEDRPSFDALAGPIFDGIMSARQALAAAGGYEKQGAFTGPHGDSDEMYANDISMVQMQAMPTINSYGCSVVHISGASPTRDATGAGPNEYANDSGMVLACNYHDVVKATTVTVEQPQQQQQAQQSAGHITDDVPQTALNIAEYCALEV* # ORIGINAL: g8313.t1 original gene structure, not modified by PASA NODE_374_length_25548_cov_47.4181 AUGUSTUS gene 5776 7635 . - . ID=g8313;Name=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS mRNA 5776 7635 . - . ID=g8313.t1;Parent=g8313;Name=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 7448 7635 . - . ID=g8313.t1.exon1;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 7448 7635 . - 0 ID=cds.g8313.t1;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 6937 7288 . - . ID=g8313.t1.exon2;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 6937 7288 . - 1 ID=cds.g8313.t1;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 6396 6594 . - . ID=g8313.t1.exon3;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 6396 6594 . - 0 ID=cds.g8313.t1;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS exon 5776 6134 . - . ID=g8313.t1.exon4;Parent=g8313.t1 NODE_374_length_25548_cov_47.4181 AUGUSTUS CDS 5776 6134 . - 2 ID=cds.g8313.t1;Parent=g8313.t1 #PROT g8313.t1 g8313 MDGGIVILRRLLHAVGEVDDGSDDAPTDPAADPMGMHSGDSSTLRSIKIASFFIVPICTFAGAIPALKSRRLLANTVLLSYCNTLAGAILLGFGFLHILPDAVESFDPYIDRVKGFPIIYAMTLFGFFAVLIIEKGIMNRLEFLRARALSSGQNAPAYDVGDVTVSTETTEKPTAIQLEKRPMEIDAEHCHTHGAGACAFHTHDVVISGGDNSNVPWHYSPLLLTFGLSLHSIFEGLALGLQDGTRGLVLLLVGIVLHKWAEAFALGVNLAKANVPIWRALAIVGVFSLVCPIGIGIGYGVRADLNQEAQDIVSGLLQGVAVGVFMYITILGMVVEEFAGGNKLPQKFALAMIGCAAMGCISFFE* # PASA_UPDATE: g8312.t1, single gene model update, valid-1, status:[pasa:asmbl_6486,status:12], valid-1 NODE_374_length_25548_cov_47.4181 . gene 6 4413 . - . ID=g8312;Name=g8312.t1 NODE_374_length_25548_cov_47.4181 . mRNA 6 4413 . - . ID=g8312.t1;Parent=g8312;Name=g8312.t1 NODE_374_length_25548_cov_47.4181 . five_prime_UTR 4352 4413 . - . ID=g8312.t1.utr5p1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 4235 4413 . - . ID=g8312.t1.exon1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 4235 4351 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 3377 3502 . - . ID=g8312.t1.exon2;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 3377 3502 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 3030 3233 . - . ID=g8312.t1.exon3;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 3030 3233 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 2678 2790 . - . ID=g8312.t1.exon4;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 2678 2790 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 2166 2505 . - . ID=g8312.t1.exon5;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 2166 2505 . - 1 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 1175 2023 . - . ID=g8312.t1.exon6;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 1175 2023 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . exon 6 996 . - . ID=g8312.t1.exon7;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . CDS 214 996 . - 0 ID=cds.g8312.t1;Parent=g8312.t1 NODE_374_length_25548_cov_47.4181 . three_prime_UTR 6 213 . - . ID=g8312.t1.utr3p1;Parent=g8312.t1 #PROT g8312.t1 g8312 MGSLFRSEEMTYAQLFFRADAAYDAVSELGTVGLVQFKDLNPEASQFQRQFVHEIRRCEELERKLRYFKDQMNRVNVPVPEIDPEEDSQAAYPQASELGDFELRFAQHESALKELSTNELSLTSDLHKFTELHSVLTLSASLFNEAERQGNTPVTQEGDIEMGSASQFGLSFFAGVIPVARLVAFQRVLWRISRGNVFVRDVEITQPAVAATPATAQPEVKHVFVAFFQGPALGAKVRKVCDAFNATIYPCSNSAARRREAARDVESSIADIRSVLSQTSSHRRRIVEEIMGDFRSWSVKIVKMKSVYHTMNNFKTDASRQCLVAEGWIASRDLADVRAALRRLDTGSGSALITGGMNPVPASILHVLSTRQTPPTYHRTNKFTAGFQAIVDAYGMASYREVNPGPFTIITFPFLFAVMFGDAGHGLIMALLALYLIVREKPLSKVKEGGEMWATMFGGRYIIFLMGLFSIYTGLIYNDIFSKSINIFGSAWSFPAAQMANRPSKDDNYVCDPFDDYAGSPYPFGMDPWWNLSENRLSFLNPYKMKMSVILGVVHMLFGVTLSAFNHAYFRKPLNIICEFIPQVLFLSCIFGYLVFMIFFKWVTVWPHSKAPSLLITLINMFLKYGKVEDEDLMYKNQATIQSALVIIAMMCVPWMLLIKPFYLRWQHNRRHTSPDAQYRALGAGRSDGLEGSGSTDALIDAGDADADAGHDHDGEEEEEFDFGEIMVHQSIHTIEYCLGCISNTASYLRLWALSLAHSELSEVLWNMVLKAGFKGNLGLLFGAFAFWAALTVCVLLIMEGLSAFLHALRLHWVEFQNKFYAGVGRPFEPFVFREILVAITAE* # ORIGINAL: g10255.t1 original gene structure, not modified by PASA NODE_156_length_34203_cov_54.2639 AUGUSTUS gene 8024 13849 . - . ID=g10255;Name=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS mRNA 8024 13849 . - . ID=g10255.t1;Parent=g10255;Name=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 13720 13849 . - . ID=g10255.t1.exon1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 13720 13849 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 13342 13590 . - . ID=g10255.t1.exon2;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 13342 13590 . - 2 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 13166 13254 . - . ID=g10255.t1.exon3;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 13166 13254 . - 2 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 12832 12966 . - . ID=g10255.t1.exon4;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 12832 12966 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 12394 12585 . - . ID=g10255.t1.exon5;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 12394 12585 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 9197 12124 . - . ID=g10255.t1.exon6;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 9197 12124 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 8899 9039 . - . ID=g10255.t1.exon7;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 8899 9039 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 8284 8361 . - . ID=g10255.t1.exon8;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 8284 8361 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 8024 8155 . - . ID=g10255.t1.exon9;Parent=g10255.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 8024 8155 . - 0 ID=cds.g10255.t1;Parent=g10255.t1 #PROT g10255.t1 g10255 MRKCGVLLALMAVVAVVGTAVVHAYPVPVVVVYGARNPLSVLEVVTVDASGSYDSSPNANLSFAFDFGEGLAPVWTAVPVQTVVYATPGVRVIVVTVNNRNSSDGVTVEGRPAPSASTKVAIVDRPSCYYYSVAGEEAGGIVRDDAEDGTFNLYAQVTIHAGSPASTRQRLTREFADLGEYPVATFSNSTKSISFNFSYPLDAATQSWKAMVDLSLLADSAELFTLTVSGHGMVVMSCSVADSVFQWMPLTFKGVLGTIVSTGSPTPQGLSIAAGNFTPTGLYFSTDPCTYSAAAAVFGKSPYLVLSNNIFGSSTRVVDLSNTMCKALGSGTCDASFRPLSGTFDLIASAVVTCVDALIVVSNRGVFVGSALLKSGTSSLVAVTASMPSALRAVFADGTSTNATTTKLFGPLRCEPGFPEKYVAYVVYTPASPATNGIISLVAKSSPPFTAWTQLAVSAASLGLDASVKLRVVEISRDNDLKNNVMLITRMDGTHASVAVVPDVGTPTVTFTFPPTLVFEGLRIHANGYNMYAFGSTLWLSTDGGSNFRSLLRLPEADIAIDFLSSTGLEAFSLFASSGAVYYGRAGSLSLVRAREAIAHSGRSPVLEAGVIDNQGDVFVFQLPVPLGAYPSSPSLYPIGLLDKPDGTVAKSPFKKTMLPTVSAARSDDEAFDAALAIAPLFFDRLYVFPVGPVATRPNGDQSDEFDAADVGRWLVQATGAFDFGGTAFFSDGQRGVASLRSVVQLGVRNVAICDTRSPLRSVAAADSPAVGYTLTVVGPSYTVLGTQPLYGFTSGAQAYPGSPGNRDIVSLQLGGLGVGDEGWLRSDVGKSVSLANGAYVIVHYVNSTNVDALTVAPAPYLRSPFGVGEWQMYDFRSFFEYASVSSQGVTVSGSGASLVVVLDAGYMAFAPGHVGMVLGATDGTNTQPGYTAAVLTWGVIRGVVNGTAAVVDGVDGGLQAGYLAAGNWTLYAIAAGSSAATLPHVRARPWRLVVGECPYMELTTVGSSRRLLFLDYGESTVLSAQLTRTLVHADASLANTAVGLFAGMTNPGLVQFKSNATLRGVGVRTIKMQLQLSERAQQGSVSILVRPPDATLMCTATSLDWRVVVGCPPDRQFVWVWPYDLTREQFLLGNVERAPGRAAVIDLPANYRPPSPQGRGVPTASRFYNAYPELPKHYNDFRISRETGTYNMCLGKTRRADCGCTDDLRMSSALGTTDCQDRIITARYSDKFHPVFNVLKEGVPPEVFVGSYVMTEVNGRLDWSTDGHTVGPNGESILTSDTSLVFSGWQLFHFSISVITANTTYCTLQSDIKIYVTDPPLTSTVMFISVSITGALFAGLIFAAYLWHHNSHKNSY* # PASA_UPDATE: g10256.t1, single gene model update, valid-1, status:[pasa:asmbl_2005,status:12], valid-1 NODE_156_length_34203_cov_54.2639 . gene 14287 18272 . + . ID=g10256;Name=g10256.t1 NODE_156_length_34203_cov_54.2639 . mRNA 14287 18272 . + . ID=g10256.t1;Parent=g10256;Name=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 14287 14856 . + . ID=g10256.t1.exon1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 14287 14856 . + 0 ID=cds.g10256.t1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 15600 16084 . + . ID=g10256.t1.exon2;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 15600 16084 . + 0 ID=cds.g10256.t1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 16487 16787 . + . ID=g10256.t1.exon3;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 16487 16787 . + 1 ID=cds.g10256.t1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 17016 17311 . + . ID=g10256.t1.exon4;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 17016 17311 . + 0 ID=cds.g10256.t1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 17472 17614 . + . ID=g10256.t1.exon5;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 17472 17614 . + 1 ID=cds.g10256.t1;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . exon 17743 18272 . + . ID=g10256.t1.exon6;Parent=g10256.t1 NODE_156_length_34203_cov_54.2639 . CDS 17743 18272 . + 2 ID=cds.g10256.t1;Parent=g10256.t1 #PROT g10256.t1 g10256 MASVDGSVGGVAAIAGSAALSAPTATLQSASTARLEAAGATSAPDPVIDSTSHGTGTVAALKDALSVCVNKSERMHKAESRIEQDPYDGDAWNALLAEARISGDAEVQRACFERLLRRFPTSAKHWRAYAEYEVRMGAYDRVEKVFERCLLSCLNVDLWKSYLAYVRDTKSGLPNFRDVMTKAYIFAVEHIGLDIGSQQIWHDYIEFLKSGEATGPYEEGLKMDAVRKAFQGAVVNPISGIEQLWKAYDQYENNLNKLTARKILHDRSAAYMTARSVCKERKTLLDAIQPPVLPMPPTGTQREAAQVQAWRKYINYERSNPLRLDDTNAVVDRVLFAYNQCILSLFHYPAIWYERGLQAVPESLLLHFSFAEFEESRLNNDRARKLYEDLLASPRLSDPTLVYVQFMRFLRRSDGIKPARALFTRARKDTRAQWHVYAASALMEFYMSKDASIAFKIFDLGLKQHASSEEYIRAYLDHMTHLNEENNTRVLFERVLTSLPPEKAAEVWSQFLRFEVENGTLTNVASVEKRCVAALSKAVGDSIALKALVDRYCFMGLQPCSAEELRAFGVELSTDRAVYGEAEGFVHAQHKESLPIGHDIAKSDFVLPDVSLMVPFRPEVMTPSGIVGDQGIPEAVAALLRVLPAPQSFTGPFLNPDELLHILAKTNLPPPPPGVAAPAQHSHQPTTDVGMRLPHMPPMRSEEGGGFSPRLRERDPRDSHSGQPAPPGHAGQQGRPRRKRGASESDEEGGQKDAPYRPPAHDLFRNRQQRRLNQ* # ORIGINAL: g10254.t1 original gene structure, not modified by PASA NODE_156_length_34203_cov_54.2639 AUGUSTUS gene 4249 7629 . - . ID=g10254;Name=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS mRNA 4249 7629 . - . ID=g10254.t1;Parent=g10254;Name=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 7372 7629 . - . ID=g10254.t1.exon1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 7372 7629 . - 0 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 6735 6985 . - . ID=g10254.t1.exon2;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 6735 6985 . - 0 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 6026 6410 . - . ID=g10254.t1.exon3;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 6026 6410 . - 1 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 5709 5863 . - . ID=g10254.t1.exon4;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 5709 5863 . - 0 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 5445 5515 . - . ID=g10254.t1.exon5;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 5445 5515 . - 1 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 4499 5085 . - . ID=g10254.t1.exon6;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 4499 5085 . - 2 ID=cds.g10254.t1;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 4249 4356 . - . ID=g10254.t1.exon7;Parent=g10254.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 4249 4356 . - 0 ID=cds.g10254.t1;Parent=g10254.t1 #PROT g10254.t1 g10254 MATDLQRNTPYRLFSGDSSASHTNNSNNGDADEEVGGGRTAAPGTGRYVIYHVKLTDAFSMALGAAQKKGKDAALLVEFATHGAAGTFTIEQEGMLPTAYNFGLSSGAGEVESGAAGQASVDCIRQARGQRDLHVTGRVGDKMTVKAVFTKEFAAKTKAKFNETEKKGPVVKMYETAKRTTLTPAQSSVPPPRPPSSTSPNSHSPQLSPQQYKSDTVKRQALTKKVNRLAKGGSSSTVSSGAADFADRKAAELAVIVPALQERTVRLLAVRPHTRTELHKQLKLKGMEVTQLDTVLNKIAKVNGSYFALLPMAYESLSLHSFAEAERAAVRALAIKTFDTGGISHNAPLRQRFLKDTSGPVDGDDGGGVREKKAAPLPKGAPRKSPDSKKAPATQKVPMAQSPKIQKKRDRARISSSGESTSDDSDGSSPSDGGIDRHKKKRRRIDGEKVERKISGEIGKSAAKNTAHTQSDSDGTEREKRKDEVRAQRKDKGEGGEDVVKVASYADYERARGLFQSGFPRLQELHAWLERNTSEFGRMGDDIKRLEKGSAEYAALRQKMTDLFTQRSPILSKKQREYDALNTRLRMIKDRVLEFEKANNLSGD* # ORIGINAL: g10253.t1 original gene structure, not modified by PASA NODE_156_length_34203_cov_54.2639 AUGUSTUS gene 320 2602 . + . ID=g10253;Name=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS mRNA 320 2602 . + . ID=g10253.t1;Parent=g10253;Name=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 320 441 . + . ID=g10253.t1.exon1;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 320 441 . + 0 ID=cds.g10253.t1;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 720 877 . + . ID=g10253.t1.exon2;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 720 877 . + 1 ID=cds.g10253.t1;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 1139 1304 . + . ID=g10253.t1.exon3;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 1139 1304 . + 2 ID=cds.g10253.t1;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 1637 1788 . + . ID=g10253.t1.exon4;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 1637 1788 . + 1 ID=cds.g10253.t1;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 2154 2602 . + . ID=g10253.t1.exon5;Parent=g10253.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 2154 2602 . + 2 ID=cds.g10253.t1;Parent=g10253.t1 #PROT g10253.t1 g10253 ASDDTVHQIFHPLEEQFFISSQHENIAANDLTVFETRMNLKRDMLGDLDHDKGLGATQLFSYRFDSNYASSRVCTSSIVESLLCQQYYRPYILDVIKAILGADKGVNEFGERTSQIYEVPVPSALFDKEYALAIEQLAAVGILCIGLFRCPEARKSTLPYVITNPKGSTVLHRLDRLIVLAPHEPTQEEMESSFYVAPVAGTFGQTSAPTTPAMSALRTPEATSTSGATIAVSSLALDAASGVGAAGRGAGAGAGGEAPAHASPATLPRRPDVVVPMPSPSRFSTTLVSDHDHASESEIKRRTREFDMGDASQSEDEDGGNDDFEDEIGGWQTGMLDASGAKGEWVDE* # ORIGINAL: g10257.t1 original gene structure, not modified by PASA NODE_156_length_34203_cov_54.2639 AUGUSTUS gene 19043 27580 . + . ID=g10257;Name=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS mRNA 19043 27580 . + . ID=g10257.t1;Parent=g10257;Name=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 19043 26176 . + . ID=g10257.t1.exon1;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 19043 26176 . + 0 ID=cds.g10257.t1;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 26421 26516 . + . ID=g10257.t1.exon2;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 26421 26516 . + 0 ID=cds.g10257.t1;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 26772 26842 . + . ID=g10257.t1.exon3;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 26772 26842 . + 0 ID=cds.g10257.t1;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 27001 27169 . + . ID=g10257.t1.exon4;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 27001 27169 . + 1 ID=cds.g10257.t1;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS exon 27506 27580 . + . ID=g10257.t1.exon5;Parent=g10257.t1 NODE_156_length_34203_cov_54.2639 AUGUSTUS CDS 27506 27580 . + 0 ID=cds.g10257.t1;Parent=g10257.t1 #PROT g10257.t1 g10257 MARARYLCESTDAFDAPRKGNGIKILVLAAIIYILSCDCVVNVCASERQDDERIMQFREAALTSPDADGSQLDSSRLNGASELPPSPAPSSIPSPIPTDAVADSVVPARSNDMPLSFDDILSGIHLRIVTHTNMTPSTPLVLDVALSGSYFATESAPSLSFGAGVTLRLRAADALSPLTGNGRVTVSCTPGAHVSHDAADDQLLPRPPPLFHVASEGMLVLEGIAFDNCDITMARADEGATVEVSACSFSSDKCANAAPTLFISGNCSVADSIFSCANWDDDAAATALALAAMQLDGMQSSAISSLADYRIAMPVVHAEGRAVVNISDCAVFRRGLVRASGVSRSHVGGTSASDCGGMCIVASDGAVVGVVESVLDGRTLVDARGNARVELNDCHVLSGAANASTGSAFSAFDCVSLGVSQSAHLSLLGGLFSLRDQCDGIMLAGNTTALVSGVSITAFNVSFAWDISESASLTMVGTSVDAADPSVGAVGRHSGDSRATLSAVHISAVCALSASNAAVIAGEFVTVYATVNAVGSEANANAVIFADDSLGTFSDVALGATDDAVSGYSLAMRHIFRVGGQANVTITRGSCDNCPGLIYGDGRAHITLQDVIVTGQTVFPDDVALIWMVKVSIDILKGAVFVLAENATLDAVGCSVSNLPTAYFGGVGYLSGQSLAVVTDMSVDVSGGSGCHGSVFFVTDDALVDIRCSTILRVYSLLTYSEVSSIEAAGAFALDGNGAIFAEYVNITFSRSVLGGVIHAMGKSTAFVRHLYVENTIAMGHGGVFSFVNESRGMLEDITVESSYASIEGGFLHADDSATVTVADAVLGNMEAYRGSLVSARGSAVVSVTRASVSNALCKLYGFVGVLGPNNRDPRLSRPRPGQVYADVSRLGGCLAAASGAAAKLSLSDVSADIVETDFAAAAIASNGRASVSAVRVRVASAHAVGRAGFAWAMDDSVLEITSLSFQRSASDAEGGCFVASEVALLQVSDVDGHNTTAALAGGFLYSESGATTRLSRVTLPSSSSIGNGGFAAVTGSSVFAIDTSKLTNTRASASGGFIFASDSARVTTSNITVEGAEAEDGGALFLSGGAWLGVTKSSFSACAARASGGWASLSATSVLNATETTLTNCTSSTFGGAIAMVGASIASLVNVSAAAATSGTDGGFASQSGRSQLSITDSDFEGMTATSGNGGFVSMAGSVVARILRVTARRMYASGVGGVIGATGMTAQSQLHVDECLFEDSVSRFSGAFVVIAGHCDANVTHTQVVRAVSDHGAPGVLLRGSARLAMKDVHMFDVRRRAEYAGEGWMSAVPEAVAALSDVTCKNCTESSLLDSTFSISAHYPPKDVHVTILLPTPVMTAAAIAIESRNAYGYINLILQRSSMRVKNTALWGQLVMEDMVSVRVEREGRAVFDTVRVVNSDVTIEGEAQFVRTDFVDGQVRLLGQGVLYCAECTFTHTASLTQRRRATSTTNGGTTSPLIILEEMASAWLTNAVVHGAHVTGNGGFALMRDSSLLRMDGGRVEATSCSGDGGLVYAEAPLTGEGSQYISLNGLHIRSASADGNGGILSLTSNSAAFIKDCTLEVESVAGKGGGAFHMMDTASLTITNSSFASSRAGRVGGGFLSGTGSVTAMIASVDVRRAVSDGAGGFASLASSASNLEPSLTAVGLTVGSSQAGSNGGAFYVAGALVRVTDSFFESGYARMSGGLVHLAGEIPSNVRFISSAFANFSSGFRGGLVSLMDESTFALDGCNVTNIASVVYGGAVVVAGGSAAIVDCAFRNTLSLDGGGGSLLAQSGTLTVVRSSFKDTTAALSGGGFLLAQAVGEVTLRDVLVENSSADNAGGGVFSLSGLALLRATRVTVRNGVCMGSGGVLNIDDRAVAHFDSLSVILSSALTGNGGAIACMGRSAVFVANATLMDNHSFEFGGTVSVSSNAQFSATGVNIARTASFSGSGGAVALQSNSRAIFADVVIVNATAKQFGGVVYVGDTSVLDTVRLSSTASRATEGGFVFVGEGASARVTNSTVLGATAAANGGCFYLATLNVTIRHGRYSGCHASGSKSTYGQGGFLYSTSTPPSATTDVLLAAVDVDDSFASSGPVVFSQSTLDLSLLDFTSTGSRDTLFSDGNVTFTSPPTQLRLRFAGVASNESSLLSTVATVTSGSSLPAMNVTLLDAYGQAAFSSPALPLAIRLTVMEANSTCKLAGDLTRTFLLSSGAEFSNIRISSRTVPTQCTLGLIPDNFLYEKTLALFTSTLRVVRITPCSVGTELVPDSVQAGMFSCVAIAGEGVGGPVQSSSSSSIAVIVPVVVVVVCVCTLVCVVAFVWVRKNRQRWNQKQMKDFAQHVQSNMPALIDREIPRTNIELQDVLGEGAFGVVYLAQVLLGDRIRVCACKALKPGAAVDQRIEFISEAQIMMDLNHPKLVNLVGVSMAVEPMLIVLEHVTHGSLKVFLQKIDQHRHGGQSVAYGPVFQRFALDVAEGMEFLSSRKVVHKDLAARNVLISSDLFGEYVAKVRVI* # PASA_UPDATE: g4943.t1, single gene model update, valid-1, status:[pasa:asmbl_3070,status:12], valid-1 NODE_1940_length_8438_cov_42.256 . gene 3525 8358 . + . ID=g4943;Name=g4943.t1 NODE_1940_length_8438_cov_42.256 . mRNA 3525 8358 . + . ID=g4943.t1;Parent=g4943;Name=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 3525 3835 . + . ID=g4943.t1.exon1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 3525 3835 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 4082 4581 . + . ID=g4943.t1.exon2;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 4082 4581 . + 1 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 4766 5112 . + . ID=g4943.t1.exon3;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 4766 5112 . + 2 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 5243 5476 . + . ID=g4943.t1.exon4;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 5243 5476 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 5604 6100 . + . ID=g4943.t1.exon5;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 5604 6100 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 6291 6498 . + . ID=g4943.t1.exon6;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 6291 6498 . + 1 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 6736 6972 . + . ID=g4943.t1.exon7;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 6736 6972 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 7161 7334 . + . ID=g4943.t1.exon8;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 7161 7334 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 7461 7557 . + . ID=g4943.t1.exon9;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 7461 7557 . + 0 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 7689 7757 . + . ID=g4943.t1.exon10;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 7689 7757 . + 2 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 7898 8023 . + . ID=g4943.t1.exon11;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 7898 8023 . + 2 ID=cds.g4943.t1;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . exon 8225 8358 . + . ID=g4943.t1.exon12;Parent=g4943.t1 NODE_1940_length_8438_cov_42.256 . CDS 8225 8358 . + 2 ID=cds.g4943.t1;Parent=g4943.t1;3_prime_partial=true #PROT g4943.t1 g4943 MGRLAVCVALVALLATVGVAHAQFKVTIVHTGELRGNILEDSSQIGGFARVAKVLSDADALAADGRFVIKVDVGGQMGTTVWDLYYNGKQTPPLQSAAGYHARSIGLSDLHQGPFPLSDNILDITTFMPTVLSNINIAPSQKLATQVKKFAAVNVTNSFTNTTLRVGFVGMSKEDVCLLAVCYSGTDTVISYSDAATAVNSAVAALKASTTVDLVISLVPWTTYAHVQSVMAAVNGVDIWIADGGAVNLGAPDGPLTNVAASPVVATQPNGKPTYLIGQGDYRYVGVANFTFNSTGYVTAAKGVGLYMRGCSKANATKGEGCVDPLPSVNTTITNLQAAVDVWRKQPIGSTTSRLEGDVFVCRFSECNLGNFIADAMRKKNPTACQIAFINSGGIRASINAGNITLESILSVLPFRNLMSSFQIDGALLLQVLQNSVSLIPTDYTNSTARTAAFDNGGTGRFFQVSGIRFSYDPTKPVGQRIIAAETENVDKSWSRLDTKRNYKVCSPDIDRKGGDNYAMLVTGAIDPYDNGAPLDVIMREYVDYFTGLNTPITYTTNGRINITVLNTTSNFYCSLPCVNGRCVAVDRCSCDLGWTSARCDILEASSSTNIAVIVAPAVCGAVLLFVVIGFVVARRMRAGFHETEKKMWRKDIALDELIFGDKIGEGASGVIFKGTWRGTTVAIKQWIGIRMLEDATNEELRTQDGYAAKANKAMMSMGGSATGKNVSTGQSINASKKLTVTAQSIALSAFDAFQDEIAIMCSLRHPNVLLYMGTCPPPNLCIVTEFMGRGSLDGILHNKALELDWPLRVSLAQQIALGLNYLHMHDPPIMHCDLKSMNILVDDHWVAKVCDFGLTRFKEKKQKEGGQGMVGTLLWMAPEVLQGLHYNEKSDTYSYGMILYEIASRRFPFEERLEESGKSKDGIELLLSNICEGMRPKLARHVPRDYVVLVEQCWHENEEKRAELSKVADALTKLLSD # ORIGINAL: g4942.t1 original gene structure, not modified by PASA NODE_1940_length_8438_cov_42.256 AUGUSTUS gene 276 2801 . - . ID=g4942;Name=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS mRNA 276 2801 . - . ID=g4942.t1;Parent=g4942;Name=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 2746 2801 . - . ID=g4942.t1.exon1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 2746 2801 . - 0 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 2497 2646 . - . ID=g4942.t1.exon2;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 2497 2646 . - 1 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 2258 2385 . - . ID=g4942.t1.exon3;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 2258 2385 . - 1 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 1975 2162 . - . ID=g4942.t1.exon4;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 1975 2162 . - 2 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 1653 1831 . - . ID=g4942.t1.exon5;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 1653 1831 . - 0 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 1354 1492 . - . ID=g4942.t1.exon6;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 1354 1492 . - 1 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 999 1091 . - . ID=g4942.t1.exon7;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 999 1091 . - 0 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 610 804 . - . ID=g4942.t1.exon8;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 610 804 . - 0 ID=cds.g4942.t1;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS exon 276 352 . - . ID=g4942.t1.exon9;Parent=g4942.t1 NODE_1940_length_8438_cov_42.256 AUGUSTUS CDS 276 352 . - 0 ID=cds.g4942.t1;Parent=g4942.t1 #PROT g4942.t1 g4942 MEGKIAAVQGGGRFSTTGWDSLRIEPCSSLSDALPLSDFTNVAFDVTGRIMYGVDRRGNVFGFDFVLQRYWTHRTGQRATAIRCSTTSRTELFIAHADGIVRVYAADLGHAGTLTEVHQLRGHRSHVHNVAVHPFGTLVATVSHDACHVWDASSDGQFTRIRTLAGADQVGVSHVLFLSSPNGVVTCFEDNSIVVWVLPSFNYLCSLHLPEEYADDEITGIATSDDNQTLVAASALRLHVWSLETTKHERSIALPGDIGHVRGIQAVPRPGLKSIFGDAGVHAFAVHSSRGLFVVDVNNGRVVKVADLTGQSVLDAAFDPKGRFVASCVVSGALRLMHMVPRVGTASRKKTQAPRATRKSDTVGKRNERLETAFDKESQKTMNEDRILTILDTYGQFPEKY # ORIGINAL: g4593.t1 original gene structure, not modified by PASA NODE_4379_length_1708_cov_43.6601 AUGUSTUS gene 184 1343 . - . ID=g4593;Name=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS mRNA 184 1343 . - . ID=g4593.t1;Parent=g4593;Name=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS exon 1002 1343 . - . ID=g4593.t1.exon1;Parent=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS CDS 1002 1343 . - 0 ID=cds.g4593.t1;Parent=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS exon 894 909 . - . ID=g4593.t1.exon2;Parent=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS CDS 894 909 . - 0 ID=cds.g4593.t1;Parent=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS exon 184 436 . - . ID=g4593.t1.exon3;Parent=g4593.t1 NODE_4379_length_1708_cov_43.6601 AUGUSTUS CDS 184 436 . - 2 ID=cds.g4593.t1;Parent=g4593.t1 #PROT g4593.t1 g4593 MAPVSKQFKEASAQRSKSSQPPRNTARGMGALRADADSSDDDDAQMQKKGRYSEKLAFAGDSDSDGGGGDDGYNEDDEEQGYDGESDDVPVGMGVDGDDDEDSEDDSEEERVEMERIRGELADIPFDELQRVRQKIGVKKFDATFGTRSMGASAVAGDEDASDGDGDDDVPPRERKSKPAPKERTEGITKLKKGEVVKRTNKK # ORIGINAL: g1904.t1 original gene structure, not modified by PASA NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS gene 2133 2621 . - . ID=g1904;Name=g1904.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS mRNA 2133 2621 . - . ID=g1904.t1;Parent=g1904;Name=g1904.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS exon 2271 2621 . - . ID=g1904.t1.exon1;Parent=g1904.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS CDS 2271 2621 . - 0 ID=cds.g1904.t1;Parent=g1904.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS exon 2133 2153 . - . ID=g1904.t1.exon2;Parent=g1904.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS CDS 2133 2153 . - 0 ID=cds.g1904.t1;Parent=g1904.t1 #PROT g1904.t1 g1904 MSAASYGASSLLSTGDYALPASRLHTAGSVGGSGAVGVGGSGSGGDTSSADGPGGSGQEAAVSALREWLKRERSLRMALERQVQSLKSQLYALKTGDTRRLGDEMRSLCENLNRESELHEHRV* # ORIGINAL: g1903.t1 original gene structure, not modified by PASA NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS gene 519 2094 . + . ID=g1903;Name=g1903.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS mRNA 519 2094 . + . ID=g1903.t1;Parent=g1903;Name=g1903.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS exon 519 1208 . + . ID=g1903.t1.exon1;Parent=g1903.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS CDS 519 1208 . + 0 ID=cds.g1903.t1;Parent=g1903.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS exon 1276 2094 . + . ID=g1903.t1.exon2;Parent=g1903.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS CDS 1276 2094 . + 0 ID=cds.g1903.t1;Parent=g1903.t1 #PROT g1903.t1 g1903 MSPDMVHPFYAVRALTRRFDKERDVKIPVTRSAVIRLAACGDFDPDTEAAIREWFTVDDNLTIEALDAVHSASNSVCKTLHKTQQANGMAEDTPTGEAVAQAPLDTLVFRLLEQLDDPAVPFEFITHRNMATSTASNATRDTSGSLGTSTRPYAQVVARWLDSAVDVVCLVDEDKAASKEADKACAQFQEPNRYMFSRVTHGTMESLLAITCTGVHVRFFELKPKADGSMGELDVRRPGDRIRLVGLALRLYRVLRGLVEYHAPTFNFNANAHAKAKDTRATPVVFVPAAPAANRPAFMEKSLGNADIASIVQEMGSIEGLRKLYPDVQEEKGTRFIVRGEIDDKCRVNTFDIGFRRIPRTVDEALFALECVLEGLKWLHTRGVVHRDLRWPNVLKIDLKRLIIIDLELCAQLDSENTAPWPKEGMLRKGLWPTYAAEARWTPSHDLRQMVKLMWMTPQVGQVGVPADVLKDPTIERLLDVLRESDATAEMGLAALRSALSS* # ORIGINAL: g1905.t1 original gene structure, not modified by PASA NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS gene 2965 3562 . - . ID=g1905;Name=g1905.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS mRNA 2965 3562 . - . ID=g1905.t1;Parent=g1905;Name=g1905.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS exon 2965 3562 . - . ID=g1905.t1.exon1;Parent=g1905.t1 NODE_3348_length_3674_cov_109.269_potentialcontaminant AUGUSTUS CDS 2965 3562 . - 1 ID=cds.g1905.t1;Parent=g1905.t1 #PROT g1905.t1 g1905 KEDRDKSQGEVSFGSDDDFDDDDGDGSDNAYLASVPSAKGGEPPKSATSKPYAPQAPSKHESEDVEEEYERSIASEISASEDDLLDSPPGAPAKRQSPASTNPGSNPNTPHAVRGTPPVAVATPLSRQPAASFEPKEMAPLLSATKQSAGDAALFESLHFGDDGPAAAAARAQVAQTSPTHPCYKIHDAHCAHHTGTA* # ORIGINAL: g5920.t1 original gene structure, not modified by PASA NODE_3395_length_3567_cov_36.3746 AUGUSTUS gene 1805 3044 . + . ID=g5920;Name=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS mRNA 1805 3044 . + . ID=g5920.t1;Parent=g5920;Name=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS exon 1805 1897 . + . ID=g5920.t1.exon1;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS CDS 1805 1897 . + 0 ID=cds.g5920.t1;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS exon 2089 2235 . + . ID=g5920.t1.exon2;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS CDS 2089 2235 . + 0 ID=cds.g5920.t1;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS exon 2360 2408 . + . ID=g5920.t1.exon3;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS CDS 2360 2408 . + 0 ID=cds.g5920.t1;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS exon 2884 3044 . + . ID=g5920.t1.exon4;Parent=g5920.t1 NODE_3395_length_3567_cov_36.3746 AUGUSTUS CDS 2884 3044 . + 2 ID=cds.g5920.t1;Parent=g5920.t1 #PROT g5920.t1 g5920 MSRKYHEDLAFIERTGPVSFRIKKGFVPNMRVEGVFFVNEHLEQLMFDELKQNSEHNGVGGFLPAVKQIANVAALPGIVGKSVGLPDVHSGYGFAIGNMAAFDMSDPEAIVSPGGVGFDINCGVRLIRTNLMEKDVAGVKEDLAQVCAH* # PASA_UPDATE: g5919.t1, single gene model update, valid-1, status:[pasa:asmbl_5988,status:12], valid-1 NODE_3395_length_3567_cov_36.3746 . gene 145 1150 . + . ID=g5919;Name=g5919.t1 NODE_3395_length_3567_cov_36.3746 . mRNA 145 1150 . + . ID=g5919.t1;Parent=g5919;Name=g5919.t1 NODE_3395_length_3567_cov_36.3746 . five_prime_UTR 145 145 . + . ID=g5919.t1.utr5p1;Parent=g5919.t1 NODE_3395_length_3567_cov_36.3746 . exon 145 1150 . + . ID=g5919.t1.exon1;Parent=g5919.t1 NODE_3395_length_3567_cov_36.3746 . CDS 146 1132 . + 0 ID=cds.g5919.t1;Parent=g5919.t1;5_prime_partial=true NODE_3395_length_3567_cov_36.3746 . three_prime_UTR 1133 1150 . + . ID=g5919.t1.utr3p1;Parent=g5919.t1 #PROT g5919.t1 g5919 HVDSDDEDAISVGSYESASAMYPPAAVDDALIARNSDLYSFGGGSSGSSSDDRSGNAYVSDSGSSSEDESEANRRRAAKQSKHVQTPLQPISVARTLPVATAAAASEDDMDFEREDADAPLAVPDFAAELFADDATADRCGNAFEGGEPIIEFVDADEYREQTRAPRTNARNKVFNKPAESDDEFINDDSESSCASSEREGRRPGPFHSSDEDSDGDEDANGDKATGAGDRKRKLGATLQRVNPAKRARVAYHPDKAMRGQIGPATAAIFASNGLNVRDVVSGKVGTTGANRGRNGGYRLDRQPDGRMDGSGRGRKDSVRERLIKRLK* # ORIGINAL: g13551.t1 original gene structure, not modified by PASA NODE_3478_length_3373_cov_38.3084 AUGUSTUS gene 2527 2925 . + . ID=g13551;Name=g13551.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS mRNA 2527 2925 . + . ID=g13551.t1;Parent=g13551;Name=g13551.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS exon 2527 2925 . + . ID=g13551.t1.exon1;Parent=g13551.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS CDS 2527 2925 . + 0 ID=cds.g13551.t1;Parent=g13551.t1 #PROT g13551.t1 g13551 MSRNNLSCGRDLHAVSDICASLDEARENGFDFICAPLVHPRFERTLATRQFVRDEPLTRSDLVLSSSGGITVCVWDVPGCCCFVVLPLECSSVRSKVDVDAMHGVPIVMVDSRMVKLASESIKTFSAPLFLS* # ORIGINAL: g13550.t1 original gene structure, not modified by PASA NODE_3478_length_3373_cov_38.3084 AUGUSTUS gene 65 1743 . - . ID=g13550;Name=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS mRNA 65 1743 . - . ID=g13550.t1;Parent=g13550;Name=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS exon 1644 1743 . - . ID=g13550.t1.exon1;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS CDS 1644 1743 . - 0 ID=cds.g13550.t1;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS exon 1214 1373 . - . ID=g13550.t1.exon2;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS CDS 1214 1373 . - 2 ID=cds.g13550.t1;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS exon 677 880 . - . ID=g13550.t1.exon3;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS CDS 677 880 . - 1 ID=cds.g13550.t1;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS exon 65 176 . - . ID=g13550.t1.exon4;Parent=g13550.t1 NODE_3478_length_3373_cov_38.3084 AUGUSTUS CDS 65 176 . - 1 ID=cds.g13550.t1;Parent=g13550.t1 #PROT g13550.t1 g13550 MHTTNNRKQENKDIKQSGSTSRDGAMARKPAEKASSGSVVTSSADGDKKEKRSQTEDVERMLQQRQKQIDYGKNTLGYQRYRKTVPHEKRTNTDPRTPDKFGDYSKRQWDGIVKAWRRALHTWDPPADDKEMGGGEEELCADDIAAMHGDILLSDMEDDVKGTSDVINHTIYDDVDIDSMLDSQLRKALDA* # PASA_UPDATE: g10425.t1, single gene model update, valid-1, status:[pasa:asmbl_2621,status:3], valid-1 NODE_1789_length_9249_cov_51.2437 . gene 3523 5949 . - . ID=g10425;Name=g10425.t1 NODE_1789_length_9249_cov_51.2437 . mRNA 3523 5949 . - . ID=g10425.t1;Parent=g10425;Name=g10425.t1 NODE_1789_length_9249_cov_51.2437 . five_prime_UTR 5853 5949 . - . ID=g10425.t1.utr5p1;Parent=g10425.t1 NODE_1789_length_9249_cov_51.2437 . exon 4493 5949 . - . ID=g10425.t1.exon1;Parent=g10425.t1 NODE_1789_length_9249_cov_51.2437 . CDS 4493 5852 . - 0 ID=cds.g10425.t1;Parent=g10425.t1 NODE_1789_length_9249_cov_51.2437 . exon 3523 4009 . - . ID=g10425.t1.exon2;Parent=g10425.t1 NODE_1789_length_9249_cov_51.2437 . CDS 3792 4009 . - 2 ID=cds.g10425.t1;Parent=g10425.t1 NODE_1789_length_9249_cov_51.2437 . three_prime_UTR 3523 3791 . - . ID=g10425.t1.utr3p1;Parent=g10425.t1 #PROT g10425.t1 g10425 MARNNVAAVFAVACIACIVSVALAADDVLLKPSKQGKTAAIIIVQGAQIPPDRYVPLAQALQDASPLSLWVAIPAFPLDAANPLVISSGMQRALKSLNATGLNAGEYPIFVAGHSLGGAMVQDYVSANPSLFAGQILLGSFLLRKHLNETYPTPTLTIGGEKDGLCRITRIAEAYYHYVLNPVDQRAAEGQFPVVVLPGVSHIQFASGDAPFLVKKYDLKPEVTADEAHKAIVAASASFIAKIAGVDVETHAQFLAQSVKDTASLVAPIIEAFEVEGYYQLKPACVDVKPGVACTLGSSWTPRAQRLMAGLDELQYGVTFDLTTSDEFHPSYQLPPHLPKIANKCEQPGPACKLTSNTISQNVYGIIESLDTAFEMITASEIRAKMVSRQAAQVAAGNASANFNETDERSTCAEINRLAYEWALTKVPEATLARFQSIGVPFVMGEDLGPYNAGPLWIWTSMKYTEQKDPATGAVTSVLVQAPMMRTPVDFWISASAGFHYCKLLSPARAVEWIYVDGLRANGSI* # ORIGINAL: g10424.t1 original gene structure, not modified by PASA NODE_1789_length_9249_cov_51.2437 AUGUSTUS gene 1320 2952 . + . ID=g10424;Name=g10424.t1 NODE_1789_length_9249_cov_51.2437 AUGUSTUS mRNA 1320 2952 . + . ID=g10424.t1;Parent=g10424;Name=g10424.t1 NODE_1789_length_9249_cov_51.2437 AUGUSTUS exon 1320 1417 . + . ID=g10424.t1.exon1;Parent=g10424.t1 NODE_1789_length_9249_cov_51.2437 AUGUSTUS CDS 1320 1417 . + 0 ID=cds.g10424.t1;Parent=g10424.t1 NODE_1789_length_9249_cov_51.2437 AUGUSTUS exon 1605 2952 . + . ID=g10424.t1.exon2;Parent=g10424.t1 NODE_1789_length_9249_cov_51.2437 AUGUSTUS CDS 1605 2952 . + 1 ID=cds.g10424.t1;Parent=g10424.t1 #PROT g10424.t1 g10424 MCEIQEKACAMSTHSRFWGSACDESTSESEEHSSDEGDAVSGGLIRVGRNTRAILEYRKKARNGIECGDYVALLDGLTWLHRKSGQLRGRHRPWGLSGILARLVADVSLFLIDGAPSLKDARKFLSTENAKALVALHQRVPRMVRELQSKVDIFTDFSHRFEFDRIACGREWREVCDRIETCIFLSSTHLTLRGLNLVTVPSVVGSFVDICAMYAAADPDMRTPTLTLRSVDLSRNPRLRSLSPSLLRALGSLQSLTLADTGVCSLPPACLSLTCLQAVSMHGVPGTANTIAVVLGGMELPSAGKDPRTVSVPSLVYLCARVLAKDIEASSSPTSGSLPSELLPADLATMMHRRFTCDLCGAICFPPQTPIVAVDDSFVLSSAHAGAHNHRASGHATAWEGADNDGSSDGHDAHRVPIRIRACSARCMLQHSVSLGSCTCVLCAHLLPQWTRTPNRASVAMGERAVAESMRREAEMASLVL* # PASA_UPDATE: g10426.t1, single gene model update, valid-1, status:[pasa:asmbl_2620,status:12], valid-1 NODE_1789_length_9249_cov_51.2437 . gene 6175 9172 . - . ID=g10426;Name=g10426.t1 NODE_1789_length_9249_cov_51.2437 . mRNA 6175 9172 . - . ID=g10426.t1;Parent=g10426;Name=g10426.t1 NODE_1789_length_9249_cov_51.2437 . exon 8932 9172 . - . ID=g10426.t1.exon1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . CDS 8932 9172 . - 0 ID=cds.g10426.t1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . exon 8592 8659 . - . ID=g10426.t1.exon2;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . CDS 8592 8659 . - 2 ID=cds.g10426.t1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . exon 7325 8410 . - . ID=g10426.t1.exon3;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . CDS 7325 8410 . - 0 ID=cds.g10426.t1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . exon 7079 7107 . - . ID=g10426.t1.exon4;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . CDS 7079 7107 . - 0 ID=cds.g10426.t1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . exon 6175 6903 . - . ID=g10426.t1.exon5;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . CDS 6351 6903 . - 1 ID=cds.g10426.t1;Parent=g10426.t1 NODE_1789_length_9249_cov_51.2437 . three_prime_UTR 6175 6350 . - . ID=g10426.t1.utr3p1;Parent=g10426.t1 #PROT g10426.t1 g10426 MSRLAALRSVDIHSFSSKNYSGESNVYHVNVYTSDMFRAGTSANTFLSLEGRDGRTGTVCLEGQFERGSIDQFDVSSSFLGPLHTITIGHDNSGFQPGWFLEKVVVEHMPTGRVYEFMCRRWFALDEDDGQIVRELKVTNVTTRAQMKAAEQAAQAAALTTILANKLAAGAFGGLGETFSKTLTRSFSLKTPLSASLSATLSSSPSMSSLSKVASQTPSSPTAATTPAPAAVSSASPWTPPASASTNTAPPSPAQPPASALPAPVEAAQAPLPRPLRREPSLLREETSRRVSSLVMAALGQRTLNRSVSLPVSGLSGQGQAAFSGPQYGYPSEPPRTLVEMKDLDCDATLLQLRQAIKAVVDHFESPNESKSQDDLGNSDVDPTVSMVVRMGLATALEQTMHFGFKSSRLFGTPYRIWQFIEKVERPDKRMTAEEEATPEYAAEMSFFEIVDRIKAHPYSAYDAKFRAFICYGLNLRMLHYWIQILANNPQTVKWFDKGSSFMRSPTLFQLFAKQIQRFKTYPFYLSVKADLPEPQLIEDPNKPPTPSEAVENETTHDIADTVSNVSTSSETSDRSVDPVGRRRQNTLQRQKGGESVEDGTVAAAAPTPAAVDTPAAQTSEGDPAVSRSPSVGSSDASRLRGTTAGRDAELATIVDEE* # PASA_UPDATE: g10423.t1, single gene model update, valid-1, status:[pasa:asmbl_2619,status:12], valid-1 NODE_1789_length_9249_cov_51.2437 . gene 96 990 . + . ID=g10423;Name=g10423.t1 NODE_1789_length_9249_cov_51.2437 . mRNA 96 990 . + . ID=g10423.t1;Parent=g10423;Name=g10423.t1 NODE_1789_length_9249_cov_51.2437 . exon 96 207 . + . ID=g10423.t1.exon1;Parent=g10423.t1 NODE_1789_length_9249_cov_51.2437 . CDS 96 207 . + 0 ID=cds.g10423.t1;Parent=g10423.t1;5_prime_partial=true NODE_1789_length_9249_cov_51.2437 . exon 382 990 . + . ID=g10423.t1.exon2;Parent=g10423.t1 NODE_1789_length_9249_cov_51.2437 . CDS 382 806 . + 2 ID=cds.g10423.t1;Parent=g10423.t1 NODE_1789_length_9249_cov_51.2437 . three_prime_UTR 807 990 . + . ID=g10423.t1.utr3p1;Parent=g10423.t1 #PROT g10423.t1 g10423 ELEAHYGEIFLERVQLVTGTLLSMLDSCVLPQDVEVDAGKRKSIKRMLKEQAAQDPYEAIQDKRNGGQQQSQAYPVKAWAGLPLGELTVPALRRTVLDPNGAGAAVSGQVVMLPGFSSNFTPTHQAVIVTRDETYAKYLSAAREAVGRLVKSEQEWLSEEMRWQQHWGKRVSGLKQSY* # ORIGINAL: g7005.t1 original gene structure, not modified by PASA NODE_206_length_31597_cov_37.772 AUGUSTUS gene 2 93 . + . ID=g7005;Name=g7005.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS mRNA 2 93 . + . ID=g7005.t1;Parent=g7005;Name=g7005.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 2 93 . + . ID=g7005.t1.exon1;Parent=g7005.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 2 93 . + 2 ID=cds.g7005.t1;Parent=g7005.t1 #PROT g7005.t1 g7005 MMMMMMMMMMMMMMMMMMMTMMMMILKKKN # PASA_UPDATE: g7008.t1, single gene model update, valid-1, status:[pasa:asmbl_3414,status:3], valid-1 NODE_206_length_31597_cov_37.772 . gene 7612 9303 . - . ID=g7008;Name=g7008.t1 NODE_206_length_31597_cov_37.772 . mRNA 7612 9303 . - . ID=g7008.t1;Parent=g7008;Name=g7008.t1 NODE_206_length_31597_cov_37.772 . five_prime_UTR 9139 9303 . - . ID=g7008.t1.utr5p1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . exon 8457 9303 . - . ID=g7008.t1.exon1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . CDS 8457 9138 . - 0 ID=cds.g7008.t1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . exon 8097 8366 . - . ID=g7008.t1.exon2;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . CDS 8097 8366 . - 2 ID=cds.g7008.t1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . exon 7891 7914 . - . ID=g7008.t1.exon3;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . CDS 7891 7914 . - 2 ID=cds.g7008.t1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . exon 7612 7781 . - . ID=g7008.t1.exon4;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . CDS 7684 7781 . - 2 ID=cds.g7008.t1;Parent=g7008.t1 NODE_206_length_31597_cov_37.772 . three_prime_UTR 7612 7683 . - . ID=g7008.t1.utr3p1;Parent=g7008.t1 #PROT g7008.t1 g7008 MDGNDGHSGSDHHHHHHHHHQGVASGHAVVHHATGDSEFARMFDAPETPARPSQQHGSAADHVVVGGQLDQSAFGQDQLENRIKATFAEIVSAIKSQFEVVSQRFSLLERAVVDLQRDVIAIGNAKPGSPAPVITTQPLQTSIPTRRPNSFLDGPIVFSQDVVVSGTPDRPSLGGFLTPPDKFALKKIDKLVPNSTVLHSRVNEIVHAIKEEIRRNIDPLLVGSPTKKALELVLARHSEIEALARTFNIDDMEVLTKHIHTRVMFYLKNEKRRRKTSAQANPGKMSGGYDSEDEGEGLHLDGSATDEAFSHQVQKGWVVEDTLDEDVGDKQNGKRPGDSQGLTPSKRQKLSQVNSEV* # PASA_UPDATE: g7007.t1, single gene model update, valid-1, status:[pasa:asmbl_3411,status:12], valid-1 NODE_206_length_31597_cov_37.772 . gene 6861 7611 . + . ID=g7007;Name=g7007.t1 NODE_206_length_31597_cov_37.772 . mRNA 6861 7611 . + . ID=g7007.t1;Parent=g7007;Name=g7007.t1 NODE_206_length_31597_cov_37.772 . five_prime_UTR 6861 6918 . + . ID=g7007.t1.utr5p1;Parent=g7007.t1 NODE_206_length_31597_cov_37.772 . exon 6861 7213 . + . ID=g7007.t1.exon1;Parent=g7007.t1 NODE_206_length_31597_cov_37.772 . CDS 6919 7213 . + 0 ID=cds.g7007.t1;Parent=g7007.t1 NODE_206_length_31597_cov_37.772 . exon 7332 7611 . + . ID=g7007.t1.exon2;Parent=g7007.t1 NODE_206_length_31597_cov_37.772 . CDS 7332 7588 . + 2 ID=cds.g7007.t1;Parent=g7007.t1 NODE_206_length_31597_cov_37.772 . three_prime_UTR 7589 7611 . + . ID=g7007.t1.utr3p1;Parent=g7007.t1 #PROT g7007.t1 g7007 MFGDVASAVYDELTLFNVALILASLYLVRLIVTPAPDMTKAPTASSSAPTQRREPPAPRDFVLSELRTFDGRTPQTPVYMAVAGKVFDVSAGRHFYGPGGPYSSFAGRDASRGLAKMDVNATDADRYDDLSDLTRAEREILGDWEAKLGAKYPLMGYLRPPTSAPAQDATSGDGEEDSRQKQD* # PASA_UPDATE: g7009.t1, single gene model update, valid-1, status:[pasa:asmbl_3412,status:12], valid-1 NODE_206_length_31597_cov_37.772 . gene 12662 18781 . + . ID=g7009;Name=g7009.t1 NODE_206_length_31597_cov_37.772 . mRNA 12662 18781 . + . ID=g7009.t1;Parent=g7009;Name=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 12662 17038 . + . ID=g7009.t1.exon1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 12662 17038 . + 0 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 17126 17283 . + . ID=g7009.t1.exon2;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 17126 17283 . + 0 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 17396 17567 . + . ID=g7009.t1.exon3;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 17396 17567 . + 1 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 17701 17775 . + . ID=g7009.t1.exon4;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 17701 17775 . + 0 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 17857 18102 . + . ID=g7009.t1.exon5;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 17857 18102 . + 0 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . exon 18198 18781 . + . ID=g7009.t1.exon6;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . CDS 18198 18728 . + 0 ID=cds.g7009.t1;Parent=g7009.t1 NODE_206_length_31597_cov_37.772 . three_prime_UTR 18729 18781 . + . ID=g7009.t1.utr3p1;Parent=g7009.t1 #PROT g7009.t1 g7009 MTARLRSAINLRSAINYLFHFVTDADRDADSGNVSINGKSRVQRLLWIRPTTPESLFRRHIDAGEYGDALVLAHLYALDADLVYMRQWTKAAVSRASVVDYLSKITNTEWVVAECISRVPHSFESARLLLEYGLQKATVPRLASVAHSLKNVDTDADDSSDEDSGNGTAGHARRGNHLPRSALLDSEVAVLRQRRVLLKFMDRLSSYEAICRSMKSRFDDDEFRRFREADMIEIAANYAVGESLEALEIVLTRHGEVAAHLLPLLSCIPETVNPRDFSDLLPVWEGNELAVIESRPWRAHRDWAEVDWIEEVCGPTTHQRAVGDGRAPYSDSSRQLHSFVLPSGGSARAVAGDWYCERAKEIEASSGLVDWALALIELAAQKGFEDFVAAVRRDVLCLRTLVFRAGAPVSFGLPQLFELGTQERLRMMVAKSSSESFARDMKEMCLPYLRSLCNADSAGLSVLKECLMEFASEGQFSECVAVFRESRPGMALSSRILADDQLLTEAILGCGYACKAVSTRTVTDMKACVECLPQRELDIASSAYRVLYDRVDAFIRHVVAFETLVRHGLGQPLAYFLDCNNDLDGARSLFLRMARSFARSKSSKAEWRSLHEDLCTLRRSAFPSLEEECAHSAFAAAVLSSGRHEIFDLVRDLWGSESPRLSAEEASELVVAAAREYFNSAGSLSDGSLILARKCLKLAPEDEAISAELRLIEAVDLLHGGGVDMLPIQVRLCTDKLDLVQRFLWAGPRAYKKTQHVLELGRFLGLCDVPNGADGSIATGSAPILALIASRSTDLGDYSAAYAILADAVKAGNGVVWEACRDLAAQGAGALSLGQCRRMASFAIAHAPASLVAGCVALWRTVEASQESNANNNDDLDSLKGLRNQWTSEGGVSPKLSLGLSELVYPQNALSLAAPFSEANESVAILRTWCGIESAAHELPDKAPDYATLLHDHSFLGSALPLSLAQRLFHTATSRGLQGEGYVIDAAVALALENVGRDSPFAFAILLDLPAAAFADRVFGMLPNSEPVYLMACSCFLLRLCNRFRGTSAAPESADHLLSKPPGEIVSTLEPWLRSLALPSPAADEDACRAATVARHYVEMLINSAQARVLEALGQGVDVPRFARDDAYKRDVILMLAENGDGALATSLSLADRYGISKTEVALRYLEVILVGTAPLSKGEVEQTDRVQPLITALPDVSYPRLLALYHRVNGRDHSRLMVVLSMLAECAESKTEAAAVLKGGAAGLAWSEHLSVLRKLRQAAAGIDYKMLVDGDDEARETAVAEVLSDGNVHVVARAVSRLPCGSLSSSRVFYLHIVRKMCNQGTRTDCEGRFKAVAGDLGRLSKVEFISLARALCVGVDVVESVPVPDRIYIARSLLGFAERAGSTVAAPAGKGKKSRPKPQGALGEDDVDMELADVVPDLKRVVSHVTSIDSVSSFDFCRTDRSYIRAYDLAFGDAAKLSELGVRLVTEGWSRDSIVDYLRLANNTYGVVLSLHTIVADAVVALLEQLRSSGTSTDDMARAGHLSKAVTIALSLSTDCEPLVDHLRTFCADPSVKQSAREAVLNVLETQLDTGSEALLHLRVSALLKHVLEREVGPDDIAVPSSRLSLVESLLASGSSTLTIFELLQLFAAVDGRTLYSHLYERTLSAWAADKDKSSGLLPLARDLDIRAILSESGDDEVRAQLSVTEGSALACAYAVHSEHASIRYGALEAIRTGVSIMTASDAGIVAVEILHSRFVSDYVVAAATSASPLFFSATVTILQETGAVVDAGALCAVLISSNRPLHGAALARVALGSHSSLCSSAYPCDLLIRSLSSFLKCSGTPFCHLSPPMSAFVPTANAVLSKLSSHSH* # ORIGINAL: g7011.t1 original gene structure, not modified by PASA NODE_206_length_31597_cov_37.772 AUGUSTUS gene 23035 23490 . - . ID=g7011;Name=g7011.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS mRNA 23035 23490 . - . ID=g7011.t1;Parent=g7011;Name=g7011.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 23035 23490 . - . ID=g7011.t1.exon1;Parent=g7011.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 23035 23490 . - 0 ID=cds.g7011.t1;Parent=g7011.t1 #PROT g7011.t1 g7011 MERYFNSKRKPIPTYKLGNIVGVAVRADLRGHLRAQILPCRVVNIPRMNLYTLLSEWGTLDRIYTPDALVGLHKGNYMELSPANDAIPTAPISLAGACNAFAQRVHPGAAAPAFCACRAGGCKTRRCVCFKSNIRCNSNCHSRMPACDNKD* # ORIGINAL: g7013.t1 original gene structure, not modified by PASA NODE_206_length_31597_cov_37.772 AUGUSTUS gene 25396 31146 . + . ID=g7013;Name=g7013.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS mRNA 25396 31146 . + . ID=g7013.t1;Parent=g7013;Name=g7013.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 25396 31146 . + . ID=g7013.t1.exon1;Parent=g7013.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 25396 31146 . + 0 ID=cds.g7013.t1;Parent=g7013.t1 #PROT g7013.t1 g7013 MMMQTWALAQAPLLSPLSLLLCLLFTLSLIVDQLLPFASASVSLCLHDAHACSISDTGGLECWAQTAYGPSKLQPPGSDLLSVGAVSCGADGLVCALQHAQAAYRTGPLPGSATLSARASNGRCWNVSAVPAALGFVSGVASGWERGVDVSARLLPSDFWSDAPAQPTSDQLMHLAIGRRAACGVRASNGSLACWPLSGSARARIVELPAMLLASQSATVAHIAMSPYAYDSRAGDVLCTLDSADALHCVTIGLRATAPPAIRPLPLPGAFVDGAPAPPSSGYAYVSVGNDVVCALSLLASLECWARSSVGYVAFAPAAADWSGGTAPAFGELFISLSCGAGSCCVVTVTGGDVRCFRTASASASDSGSAAPLFDLQRVLTDESEGEPLGTRRFIAVASGRAALLAIDSTGRLSAYGSFLRIGAGKAEGERWLPHATDYAAAPTTAAIVLTDYNPLYTSESVHCAFILSWDSSVQVLFQRLDSAAHLESRVQPLRTGSDPAASYALDAGDAVTARVLAIDALYDSDALVVCWIEAPRRSLQCNPPLRDISRYGVQQLAFNGGAFSDLCWLIAPAELAGAHPALECIAFGIGRRTTAPQYWLDFNSTYGGERGWASFSVFDGAICALHANGSAFCSGAHYLYSVSRLNRDYDTLKVPVRFPVSPAQRFASLVGACEVGVCGVLLNGTLSCALPLPPTNATEDYANWYSFAYHQLNHALWPGVQNALRLRPFMGGLGVLRSSGRLWPLGIVTQPSSSVDVASLWFSRFAVADVAASAGTYTVHPFCALTPQGTVHCASSAPTLSPGTTVLLLPERAVEEVAWGWGLLCYRLATNAAVLDSDGGLLDILGGRVRCVTDDNKSPKYVSADMVNVPRQPLRAFAIADDFALGITFAGVGVAWGSVALPPLIAAQPALAVACYQSVCCLLLSDSTVACVSAPGVNLPFNTSDIGSGVQRMAFNCNTACFFYHDLNLATATSASSSGLQQRKRCFFIGIESAALSAVDFVALSCGSLGVCVTLRNGSASCVSSEDNAQDYTPFLLFRGERVGPMIAQALSFPLICVAAWPSAALRCSNGSAELAIDQLLPASFNSSAPVASLTGHDGLCIVFRNGRAHCITHSYALGTINRTLDFVSADADATSATMAILRSGVGILHGSARGQFASGLERGRCERGVADVVGAASALCLQPCSAGRFIRSAVPLPPSEDDWLEASAATLCSQLCPPGAACPPFSPPAACLPGRFRGADMLACTNCFVGTYALRNGSTHCNSCSRVAGVDCSDGAVRILAGYFVQSAADGALQSFLCSSDNCVGGSVLVAPDGSVRFQQCATGHLQDDNPLCAAFCEPGYQRWRGVCARCDGVSAVRLLALLAALFVFARFMHFTSRSSDGSFGVFLYYAQTALLLGGRASRWSGWLQWLNFSLGDMPGVGGESRCIAPVSPLVSLLSGLLIVLACFVFLWAIALNHWLWTRCAPPLPPPADSAEPSTPPSRCSCPCSCLDCQRCLRGLCTSMRAAMRRVHVWMGSEPFSAAEYARTSLALALVSYSQVCGVVLSWLQCVPAPDGGERVFSEASIRCDSAAYQRFLPVVLVLLLLVVVGMPVALALFLFRYRHAIRAQLPLWHRFKFHQLVLKRIREIEAETEAERRLERGEIALVETPSASRRSSESQQRPEPRYPRLRDAAAHFAITQPLLQAAEPFDLWDSGSDTSPAPAPVPAPAPAAAAAASPGASRQTHPSFAVDLGMHLHQWPPVPLAASESDSVSASSSADESDSEPAYLSGTFFVRWSVLFDPYRAACFYFHVAILLRRTLTSVLLSTLFRNPREAYLGIGALHGVALALHLTLTPFSEALVNAAETASLSMVIALAALLAAYSGPDLVAPLPESVQLLFSSVLLLLSLALIAVFFIARARTKHAVQAAATQLN* # ORIGINAL: g7006.t1 original gene structure, not modified by PASA NODE_206_length_31597_cov_37.772 AUGUSTUS gene 720 6716 . + . ID=g7006;Name=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS mRNA 720 6716 . + . ID=g7006.t1;Parent=g7006;Name=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 720 938 . + . ID=g7006.t1.exon1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 720 938 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 1025 1098 . + . ID=g7006.t1.exon2;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 1025 1098 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 1211 1388 . + . ID=g7006.t1.exon3;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 1211 1388 . + 1 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 1476 1598 . + . ID=g7006.t1.exon4;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 1476 1598 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 1703 2046 . + . ID=g7006.t1.exon5;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 1703 2046 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 2163 2397 . + . ID=g7006.t1.exon6;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 2163 2397 . + 1 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 2502 2768 . + . ID=g7006.t1.exon7;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 2502 2768 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 2926 3049 . + . ID=g7006.t1.exon8;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 2926 3049 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 3134 3266 . + . ID=g7006.t1.exon9;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 3134 3266 . + 2 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 3363 4650 . + . ID=g7006.t1.exon10;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 3363 4650 . + 1 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 4758 4826 . + . ID=g7006.t1.exon11;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 4758 4826 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 4917 4991 . + . ID=g7006.t1.exon12;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 4917 4991 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 5075 5284 . + . ID=g7006.t1.exon13;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 5075 5284 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 5423 5980 . + . ID=g7006.t1.exon14;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 5423 5980 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 6114 6242 . + . ID=g7006.t1.exon15;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 6114 6242 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 6393 6716 . + . ID=g7006.t1.exon16;Parent=g7006.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 6393 6716 . + 0 ID=cds.g7006.t1;Parent=g7006.t1 #PROT g7006.t1 g7006 MAQRSASTANVAVNINSDVQPAGASSLTTTSTAPNSLPRANSATIPSTSLDTPKSSGSRSSELDRNVPAVKRKGFGGVGKGAGSAVGSVGHGVLNVGRGLGVAGKFAVSTAAVPFQRTSAFISSKLTNDTSLFPEAKASVATNSEDAPDVLAVASGSESENDDVDEDEPPRLSAPPTAVEEESPHISKRTLSIKQSPEEFTLYVLSLRCFLNPFDNESAGADPDENWASKLTFGLTDQLEDILGDKSSQLSIGQVRRLMRHVRESIERLGREADPDEVFMKSLRKFVDRLAYQANELMAKGKATRSGFVSLYRELMRIEMSRKEGGVVDEKLFENRVSRFEKLVSRDLEERSSNKTANHRRRVSLFGVTQPGKETRPTAHSIVGKDKYLARIFDVGDEEHARIKQTEEFVQTKEVIIDELKSRLKGLDTHPFYNKETFVQKTAAFLKWKASQEEAIHTMLVLLGAEKPEHSEEFIPPPSESGESAPVPVELIITVCKARDLTGKDKTGFSDPYVTIEYGSEAMRTSTCKQNLNPSWFERCKFAVKPDAKNFEVKFSVWDEDEPSEKLFSMKMFNPFDNKDDFLGQVTVNIALSDMSKYPVERWYKLEKRHKRSHISGDIFLKFEIVTKGGAKGADNKPQPTFERVQRSGSNSHGMAQPTKDTKNPDYHNLYRLLVEKSFAYEYTLYQARLLRGEKKKPFFRPSQTLFRLLQEFGVRYGVGNLYRVLVALDVATRSYARDELDIVSLSYLLVQVKERLQHPDSRWTRTEQSLFCDALEVLEDAMLRRLSMFTDHFPFSSPPGHVRQTVRALCLIYDNSLFRERKAHAKDLERVLRACIVTCCGALYARFSAMAAPVVRPTNKALAIAESISAELDMIMREIDNVAVYFRTDFTIFDGSKMIQLDPVAECVAGFGRLLAAEVESELAVTFSDRFHPEVFTLYQRLGRYNERNLILARGSDFQGFPLAEMFRPHVDAWLEQTRVKGFEWVRAAIDSDKFVPLSDKERHSSSVVDLFCMLHQFVDFVIELKWPSEEQRDGFFSSMSETVTMMIDFFGSSMVDSLNQLVAARPSGSPVNSPATARVVPPGARADPPTAINRFFGGHDVKATQVPFAADICVRLNNLEAARQQLGELYVRIDADAIAARWASGRSNAGTGSTDGNATTSATVVESAGTPELTVTGPQDGSRSRTLVDGAQSMSHSLSDPSLLDNMAPITRNFQTAADIIRDHMTGLETRLLSQVRPAILKAVEVITVDEPSAIVRFFSRRKASADFNASLEDVNTALGPTMNLVSGILDDFSKLLYGDIFDTLLSTAWEAVVVCIGEVISMRKFESGQSLEMLNQALVTLWDFFHADGSGLSSDELNTELYKIVLEVTNIMRSRQYDALMSLYHIHERHPRCSRLILDALAIADDKACREFVSQMRRPSIPSLASVRRALSAASIELRQRANTHA* # ORIGINAL: g7012.t1 original gene structure, not modified by PASA NODE_206_length_31597_cov_37.772 AUGUSTUS gene 23557 24560 . - . ID=g7012;Name=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS mRNA 23557 24560 . - . ID=g7012.t1;Parent=g7012;Name=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 24354 24560 . - . ID=g7012.t1.exon1;Parent=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 24354 24560 . - 0 ID=cds.g7012.t1;Parent=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 24165 24234 . - . ID=g7012.t1.exon2;Parent=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 24165 24234 . - 0 ID=cds.g7012.t1;Parent=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS exon 23557 23936 . - . ID=g7012.t1.exon3;Parent=g7012.t1 NODE_206_length_31597_cov_37.772 AUGUSTUS CDS 23557 23936 . - 2 ID=cds.g7012.t1;Parent=g7012.t1 #PROT g7012.t1 g7012 MLKLAADTQPVNAERIVQLRCRLDEDVEIELPAFVKPHEIAHITTTCYLQAAGTHGQVEDIIFKLPGEKMKRLGPVAIANGTIHNGVGAYDLLMQKKLYIPRKVVELFTSLCRTCPEKGRPVAARGMLKPIRTDAYLDRIQIDLINLAATPDGNFKYVFTVRDHFTRFTWLYALETREAQGVADHLEKQFDMFGAPSILQSDNGMYIANLPSLNCLLL* # PASA_UPDATE: g7010.t1, single gene model update, valid-1, status:[pasa:asmbl_3413,status:12], valid-1 NODE_206_length_31597_cov_37.772 . gene 19031 22057 . - . ID=g7010;Name=g7010.t1 NODE_206_length_31597_cov_37.772 . mRNA 19031 22057 . - . ID=g7010.t1;Parent=g7010;Name=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 21998 22057 . - . ID=g7010.t1.exon1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 21998 22057 . - 0 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 21776 21867 . - . ID=g7010.t1.exon2;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 21776 21867 . - 0 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 21419 21675 . - . ID=g7010.t1.exon3;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 21419 21675 . - 1 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 21223 21287 . - . ID=g7010.t1.exon4;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 21223 21287 . - 2 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 21017 21102 . - . ID=g7010.t1.exon5;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 21017 21102 . - 0 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 20574 20908 . - . ID=g7010.t1.exon6;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 20574 20908 . - 1 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 20358 20437 . - . ID=g7010.t1.exon7;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 20358 20437 . - 2 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 20128 20219 . - . ID=g7010.t1.exon8;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 20128 20219 . - 0 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 19909 20026 . - . ID=g7010.t1.exon9;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 19909 20026 . - 1 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . exon 19031 19810 . - . ID=g7010.t1.exon10;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . CDS 19076 19810 . - 0 ID=cds.g7010.t1;Parent=g7010.t1 NODE_206_length_31597_cov_37.772 . three_prime_UTR 19031 19075 . - . ID=g7010.t1.utr3p1;Parent=g7010.t1 #PROT g7010.t1 g7010 MLDEGSLCWVKFPHYPWWPGQRIACTETDEAGNDGHDENCCVIESFGDRTRVHIKASRQICAFRDHASKTFVTGGLNDRRHSVAFSNALDDVLQRFGVDLRRIENEAVGHDARRRTQALLSDDRWLATLQTWDPPTLYCPGEIVWTPVKSGRRWPAIVLTEVMGANTATLEPHRDTQWVVKYINLDGATAIVSSSLLAAYEPHRSEFEIWDASGGRSAGSPPIHASNESEPSCTLPGDGTLDAFKNAVRIVRMVCLGLYSHSDSHVRVVNASTDDPGADTDDDLAQPAFGNIHSNRTTEGYFGFLKEDANVWCLMKKGSPWLPYKVLSVRHASTKKAGAGRSVLRIGIIPFPYDPANLRGACTYWKISSTSPDWIKPIRYKYTEHSTACASPEFKAAMKALEADVQKKAIDGISPLIRKYRLQARYHKASRRLQEQHADPTGSPSSVSIGIPCVVPEASSCDIADGHSDDESEDDDLDPAPLLGLPSVNIDDWLGKLDVLVVSLTAIASGHEACMRHRSYFSDLSSRKRNLSTGLGPLREADWEKLATALFSRFVGHPHGGVLGSLPVSRDYVLNVLLPETIVRLMVLTIPGVSQARAEQILLSDVLFEDSSSFRVAQTSRAWEDGERESTMRRLKVAP* # PASA_UPDATE: g11282.t1, single gene model update, valid-1, status:[pasa:asmbl_9274,status:12],[pasa:asmbl_9275,status:12],[pasa:asmbl_9276,status:12],[pasa:asmbl_9277,status:12], valid-1 NODE_768_length_17934_cov_43.1069 . gene 412 17934 . - . ID=g11282;Name=g11282.t1 NODE_768_length_17934_cov_43.1069 . mRNA 412 17934 . - . ID=g11282.t1;Parent=g11282;Name=g11282.t1 NODE_768_length_17934_cov_43.1069 . five_prime_UTR 17933 17934 . - . ID=g11282.t1.utr5p1;Parent=g11282.t1 NODE_768_length_17934_cov_43.1069 . exon 14217 17934 . - . ID=g11282.t1.exon1;Parent=g11282.t1 NODE_768_length_17934_cov_43.1069 . CDS 14217 17932 . - 0 ID=cds.g11282.t1;Parent=g11282.t1;5_prime_partial=true NODE_768_length_17934_cov_43.1069 . exon 412 14048 . - . ID=g11282.t1.exon2;Parent=g11282.t1 NODE_768_length_17934_cov_43.1069 . CDS 755 14048 . - 1 ID=cds.g11282.t1;Parent=g11282.t1 NODE_768_length_17934_cov_43.1069 . three_prime_UTR 412 754 . - . ID=g11282.t1.utr3p1;Parent=g11282.t1 #PROT g11282.t1 g11282 EAGDASNTITSTISLVSVNDSPVREVSSDTLATVAEDSAATFSVASFIADKFSDVDGPAVTGIAIVGVDSVHGTWAFSTDSGSTWMTISSASASSAVHLTSASGNRLRFTPTADWNGAATITMRGWDRTNAIANGATDDATDASIIDAYSAADFEGTAVITAVNDAPSITRAAATATVEEDIILTLYDEFLIVDVDATEANGDMTVTFTVMNGRISLNAGSTFEDSPVVRHGTMTDLNSLLAQLEFDGPLNFNGQSIIQVEVSDGGNTGSGGSHSAQSSLTVTVTAVNDPPVLSLGTSYADAIQEDISANANSGTVVSDLIDDVVTDVDAGAVKGIALIDVDATNGDWEYSLDAGTHWSSVGSIDASSALLLGVTSRLRFLPNHDFFGVVFGTFKAWDRTAGSVGSVADTTAGAVNSPFSVNTREMSVAVLPVNDRPVASVGSSVLNFIEQTGGQSQDVWVFEFIALSVADVDNVTLAAADLSVDGVVDAEGLTVNSTLVSALGLSFDLSLSGGVQTLQFRGAAPLTSYLALLQSTHYANDAAEPTVGVRHVRFSVSDGFLASEVVTVEIRVHTINDNAPVLTTSAGHTTWMEDASAVVVDSGITLSDADFNGDYLMHSATIVVSGGSTDIANDVLIVGADLPCTLSQGYDVDTRTLAIAGDCSVANYQAVLRSVTFIVNVEEPVDLARVIAFTVSDGDFTATSAKVVDIVLRNDQAPIVQLNSSFPVDFLEEGPLIQVWELVCCSGQNPAISFTDADSDGGVIVNATVRLIHAQDGASEFISAAGNANITVSAASHTLVFTGPGLLGDFESAVRTVTYTNTADEPGSAPGIRALEVVIYDGAIFSSPMRTEIRIVYVNDPPRLTLNGSGNADFLIDYVESLTPIGITSPSLLIEDDDNTVLAYATLLLESAPDGLNEVLDVNVGSTGITKVYSGSNLTLVGPSSVVNFMAVLKTATYVDLNAQPGNPNTSPRRIQFVVNDGEADCEPVYTDLTFEAVNDAPIIDLNGPAPGRNFATSFTEEGSSVFAFADMTIVDVDNITIVSASVRITNNVDGAGESLSAITTGTQITASYSSLTGTLSFVGEDTPANYQTVLRSVKYANTLDEPRNDARIVVVDAFDGLDAAVNATCVINIVWINDAPVLDLDASMVGADFYVTFIEQSVGAPICAQTLRISDDDDLRMSQATIRLENAVDATEYLYIDETTVDYGLSVVGNSTHEIVVSGVESIAVYRNVLRTARARDLNVTFVERSGGVNIAAADVAISDMDNTTLTLAVVTIVDKLESLHESLLAEFGNDLSALEWDYDVSGCLTISGEATLAVYAAALRTVKYKSTASAKDQPLRVISARVFDGNLFGPNAYTTVEISPRNDAPTLALNVTGEAALSIIYVQGGPAVHVTGPYAMAVDVDSNLLGVQSVLESTPDGTHEALSVAFPDTVVTDTFVLSSGPLNTDLRVDCADTPDAYCITDVIAASGAGTVQSVQVVLNIDHSFIGDLIVSLEHNGKIVTLFSRLAKSPTQCCSGECSARNIRGLIFDDNAAASVDRYCFDNSRSMVRPVESLSAFAGVNFAGDWKLKVTDAYKTFRNGHLRGWQLIVSRDDRTALPAITYHKGWASTSALLALPFTVTEPSILFDVDVQLTIFGPLSGTRVRLTHPSGARVTLFDQTSQVDCDAVNMVGTVFDSALSQTLSDACDSGMPGIFAPVGDLSVFNDLHAEGTWTLDVFQAQGLFIESVACRLLAVTRPDFTWAYDSGALNITGVLSASQVSKILDTVVYVNHASVPDVSDRTIKTRVTDGEFWSNEVVTTVKMHNAPVVDADSNIGGSVAIAVFVENAGVLSISPSATITDDSLFKTVSASIVLGGHVDGASQEILTWTDSVGVTSNFDGTTLSLSGATSRAAYQAVIKSLTYNHTSEDPTAGDRTVSINVTDASGLVSNLAVVSLSVVAVNDPPVIFFDILNLASSVTFTEETSGAVLASHQSLYDVDDDVLASMTFVIRDCKDPDEAIDVQTFGYDVALTPSRVGPVYTLVVSATGSINVPKFRDIFASAKYVNPAAEPDPTSRTVDVVVNDFTENSDVSTVTVQIHLLNDNAPAFNIGGMAPVFVENSPALPVTDSDLVLSDADINTMFYLVGANVTIVTETVDSAQEQLDANVTGTSIGKAYDSASRTLHLTGSDTVARYEQVLRTVTYSNAADEPVNTTRVLAFVVSDGAHSSSTESRSVVVELVNDKTPAVRLNGVTSNFSVTFVEEGIAVRLSGNVSVVDADSGNFDMVGAVVAIVDGKDQNAEVLSVVGNLPANIHSSYDASGYTLTFIGAASVHDYAVAFSQVEYLNTADEPRQPGSRTISFVVNDGVHESAPVAASLAIQYVNDPPAVTLNATALSPDLLLSYMEGQLPLRISTDNLFVTDDDDTMLVSAILRLTPHPDGVREVLDVNVGATGLTKSFSDYVLTINGSASIADYIAVMRTATYHNDNERPGNPIAIPRNVSFAVNDGKNASAEVFAFISFSDVNDPPILDMNGPVAGVNFTSSFTEERGAVSIVHAGLTLVDIDSPVMHMAYAVLTQYPDGADEMLAAVVANASMAVSYDSGTGTLTITGPATLADFEATLRTLTYNNLKDEPNPLSREVLVAVTDLGGATSLARLSVVSIILTNDSPKMVDGSNGVAVSHVTFVEDGPSVAVFPGYAITDTDDVAMGKMVVALHNPAVLGEGLEVTPVGDANVTILSNPYRLEIVGTMTVADWVSMLRGIKYVNPAQAPAENVLRNVTAIVFDPSGASSNYLQAYVNVTAVNDSPVLALSVFTLAYITEDISSVNNTGSRVSEVFSSSISDVDANSLKGVAIVGADQANGRWQITTDGSTWVDVPLDVANAKSVLLADGANDKVRFAPAANFHGDASFELRAWDRTFGSNGNLAVDASDFASITDAFGQTSATVTITVLSVNDPPVLASGASLTMSSIIEDVASASNTGIAVSGLVSDLITDADTDAVFGIAIVSVDSSNGNWQVSIDSGATWRTISGATSAASATVLSALASAMVRFVPATNFFGSAQFTFVAWDATDASTNGQSNVDAALRVDAAFSVGTRVVTIDVTSVNDKPVLTPGTVNLPNILEDVLDADNTGQRISTLISGRVADADVGTVFGVVVISADVANGVWQTSTSGGAWTNISTVTPATPANIGNATLTMIRFVPKLDFNGNAAINVRLWDQTRSPDMSNGNIVIPSDAPVSDDVVVFEITVVAVNDPPVLTGVAAVVPTILEDTPLADNAGIDVRTLIASAASDVDGTTQVGIAVIGVDVSNGEWQYKTADNTTWRKFIGNVLENGAVFPLNPTDRRATLLAETASVRFLPNRNFHGLATLTYAPWDQTDVSLIDGSYGVNYFVRLSVTGPFCFARDNATITVVSVNDPPYLTLYGGNTEASLEYVQTTPPLTLANKTAVRIADEDNSTMSWLNVELAGAVDYPKEFIVFNNTNSLFSLTETSSGNIVVYNFAPAALTTTADFEALIKSFAYNTTMLVPTAGTRNLTFTVSDSVDSSTITASLLVTQVNAYAPQLSLGLLTVTYVENGVAVALADSGLALADTDPESKFLMQNASVRIVTDSLDAASQRLLADVSGTSIAAAYDFALRVLALTGADTYTNYQKVLRTVKYINDAAEPTPGDLDVTFEVHDGKFSTGAKSRTVSLQLLNDNAPVVRLNGTDVDSAVVFVEEGASVLIGSSLSVSDADSGSFLQQRAVVTITDAKDGVNERLVLSGALPSGITSSYNAGNAKLTLTGAASPADYQTALRLVKYENVADEPATPGTRTLTVVVSDDAFDSVAAKCVITIVYVNDVPELTLNSTSVSRDLALTYVEGRTLTLSTDNLVILDSDNNNMASAYAQLQARPDGESEVLDADVSGTSITKAYANGVLALTGPDSAANFVRVLKSVTYSNALAKPGNPLTTPRSVRVAVSDGAATSDYAEVTITFEAVNDAPIVDLNGSPSGRNFSTSFTEEGSAVAITSADATVVDVDSATLSLLTVTFTTAPADGASESLSAVTAGTSLSAVYSSPKLTVSGAAAPSVYESVLRSIKYINTADEPEPTSRRLIVEVSDGDAVSIALWVSIDIVLVNDAPKLFADATTATTIRSIVSEKSSIVVFPDIRITDTDDTKMSSADVTLTTILNPGQESLFMPAGISSSITGSNATGELVLTGNAPIAEWHNVLRSIRYTILDKNPDVTSRVITVSVKDLTGAVSNNVTATIALIAVNDPPVKKDSWQWDTIELNEDSSYEIPVFDNVFDYDNVLAVANVTVSTLPTKGITTVAGGKVTYAPNADYFGADAFVITVCDLVSCLTLPIAVTVKSINDGPTAQAASYTLNEDATKSVDLVALVFDKEDTLTGAQITIDTNPVHGTATLSSGTVTYAPTANYFGGDTLTYKVCDLGTPVLCASAVITFTVASVNDIPTAQGKSVTTAEDTPIGVDLSVLVTDVESVLDGTSLSIVTQPKNASVVINIVTMVATYTPNLDFYGADSYVYRVCDDDHACVDATILITVTPVDDLARPATFSVRLDEDTFIEFDMMKNVYDPDDVMTPNDVNLLNATTFGTITFSKTTGIVRYVPQLNFNGLEHVKYEGCSASGCVSAVFTINVDPINDPPIARPLNVTLKRDTNITVPLLPLTSDIEDTLDGELLSIFKSSTYGQVSIDAATGSLFYVPDLNYFGLDTLSYRICDLEGACAVAKILINVTFVNYPPVPEDIYATTEEDVEYLLFVKDYVSDIDDNRDKRKMTVSLVERTLPFATLSLNSLTGIIRFNPSLNWWGNVTFSYSVCDSNGACAQAKVYMQVVSVNDAPIASTYSDYRLLANASLTFDVLTKTTDVDANIDYFSTRVDQPLPLGTLTIVDVNDDSGSVIRKAIKYTAPTDLIGIAVIAYTVCDLGMPVLCASAKIEVSVEITGPYITSVAASDPTSKDSEFGTGDLITITFSEATSEPFVDSRNQVDRVLVMPGILAEASYTGEWTDHGKTLILTISKGLKSIPNALALLDASVSLQVRASGGLRNANLTSRASEAKSPKWTGNWGTALPKVTDFVINKEQADSGDTGKALPRGSVVTVNFNGAINYKHCDIIPKELIAKLFDKPESLGANFVARFKSKDGAACPPLDTSKYGTNLVGRVYVRDSTNTTEDSLPANSLEIIILDSTGQTLESASDVVAALEVKPSAIQSGLLNNFAGTVNASSIDVNNTVSLLDWISVDLNVNFADYTLAIENEVLANVSKLLNVSLPSVVFVQTKDNTYATMVFYVTDPTNSTAASRTAKAKLNALAANNTLSNYIPRARNNVQTSNAVADTTRSPSPKVIAFSASDPDNGDDYFSVGDVISIQFDVATNQLPVKTKAQINVFIRFSQSLGAAYSGQWVQSNLLKITIDDTTGAAPPGAGVLTATFINNVLRNADNSSLASSETTFWLTGNFGDPKPVPVLYYALPVSLFVVVVTIAVIVYMRVKPKTTKKIIPAPMDFPKDSSQPWTRPPAMVAMRNNPDPFLNMPDIGASPMQPALQQQIAAPHLPRQAPIVAPIALGQTSPKGQHPRAPRVDVVNWQAKRRHLPNESIQPAPPAMILPPLQRLPIQPPNGDPHAAPRRLPSLAALGLLPPGGVRVGPALPIDPPPLVAPPTRLPMPPPAMLQMPPLRPLAAPVENEEAPGQFGNGQE* # PASA_UPDATE: g8404.t1, single gene model update, valid-1, status:[pasa:asmbl_6120,status:12], valid-1 NODE_3486_length_3361_cov_41.3022 . gene 127 2915 . - . ID=g8404;Name=g8404.t1 NODE_3486_length_3361_cov_41.3022 . mRNA 127 2915 . - . ID=g8404.t1;Parent=g8404;Name=g8404.t1 NODE_3486_length_3361_cov_41.3022 . five_prime_UTR 2817 2915 . - . ID=g8404.t1.utr5p1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 2798 2915 . - . ID=g8404.t1.exon1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 2798 2816 . - 0 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 2456 2700 . - . ID=g8404.t1.exon2;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 2456 2700 . - 2 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 1504 2247 . - . ID=g8404.t1.exon3;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 1504 2247 . - 0 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 1157 1364 . - . ID=g8404.t1.exon4;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 1157 1364 . - 0 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 795 913 . - . ID=g8404.t1.exon5;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 795 913 . - 2 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 445 634 . - . ID=g8404.t1.exon6;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 445 634 . - 0 ID=cds.g8404.t1;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . exon 127 236 . - . ID=g8404.t1.exon7;Parent=g8404.t1 NODE_3486_length_3361_cov_41.3022 . CDS 127 236 . - 2 ID=cds.g8404.t1;Parent=g8404.t1;3_prime_partial=true #PROT g8404.t1 g8404 MSESATESVPTVERKGAAKVRYEIDRLSDRLCDEERSLLSTAGSLTALLKTKEELEKRLLECEATQHAIKRDTSVILQQLEAPAAEGMTQYWEQESLDQILLATAGLLAGPPSGADVIRHTKGIAAAASKVISGIKASLANVTDEAQKATLTLSVKEIADALAKYVSAAKIAAKSPDDPAAQEALSTVVRALQEAALSIERRGKAEASALSSATASVVREAAAPSAAAPESVAPVTLAVSATLPSATPTQAVAPAPAPVEEDSARSPVAVIPETRPESATASFLPPPNQFAGDDADDEAADEPAALASERHSLAGRTHASSQPMEPKDDYSGDDLKDSKPLPPGTVKGALRIYDASTTNKTEEFKTVSCTTATPALEVLRLALKKYHLTDDPSTYNLLEVKMEHGVRERKMEFDELPLKLKIRWEDMGGAADGYRLFMRKRRVSLNQDDAKGTVRVYAGTLKAVEEFKTLPLSIDTTAPEAVKLAMTKFKINDDPSNFSIVEVQFQLGFHERTLEKTECPLAIKTNWMKQGIKEDMIRFYLRKNK # PASA_UPDATE: g11286.t1, single gene model update, valid-1, status:[pasa:asmbl_2316,status:3], valid-1 NODE_1683_length_9762_cov_40.1747 . gene 3179 6339 . + . ID=g11286;Name=g11286.t1 NODE_1683_length_9762_cov_40.1747 . mRNA 3179 6339 . + . ID=g11286.t1;Parent=g11286;Name=g11286.t1 NODE_1683_length_9762_cov_40.1747 . five_prime_UTR 3179 3595 . + . ID=g11286.t1.utr5p1;Parent=g11286.t1 NODE_1683_length_9762_cov_40.1747 . exon 3179 6339 . + . ID=g11286.t1.exon1;Parent=g11286.t1 NODE_1683_length_9762_cov_40.1747 . CDS 3596 5986 . + 0 ID=cds.g11286.t1;Parent=g11286.t1 NODE_1683_length_9762_cov_40.1747 . three_prime_UTR 5987 6339 . + . ID=g11286.t1.utr3p1;Parent=g11286.t1 #PROT g11286.t1 g11286 MAGSSEGVPPLRRPSKSPVGEAVASSSLGNREEGAAAHTAPRAHPSSTDGFGADPRSAHNDDGTHDNRMTAYAPPPLGQRDSHHSAHSYAGDEPELVRGYVHPAYRGRPAPFDYAGGQAYNGPYEQPFGPPADPYGRYVRDFPAQREYPPAPYLQYGMYGGGPSYGSAGSARFSPYPPDSHLYGPYYGEGPPGPYSHLHPADAANMPPPAAYPPPGAMYPPQHMLEHGMMVGSDGPIVVGGRMLDKKHRQRTSIKNDQQQALERLYASTRHPLAIQKKNLSKELGIPVSTVQVWFQNRRARERRCERLINAPKQATSAEAATGVVEDGGARTDAAVGEAHVEGGGNDSTDSGMDADDVVDELNESQAADDKGSNGAAETGHVAVVSKNGPVAGHDGDATATVKHKFGKDDAPNTDTGDAAVVRPLVQAPAIAIKSESAEGDVLVHAAAPRITASTDASDKAAVEAARTPSDRGSGDSVKIGGAVDAAIKTENTRDVPVETVSAEPTSTRGEAVAEDVPNPSANTTAHGGQTNPPPSAIVAAAAEFLARGTATPEQQGPAEQTQQPQHDAADRRAGAKGGRKAPVKSPVLSANKAALVAGSAVIRKQRPDMYHGYGEFAEGHRDGGHVYDPMPMDDAHTFYRHPFDVPPAPYPYYERPSMARNPYASQFYRGPSYYDQHVVPSRRGPCEYRYRAPPLSLPARGPPPELGYPYTGMNDPREYRPPMSAPRHFARGPSPPPRHVTEPPYGSGAGAGGHALPPLNAAGAVMGTRPPYGSGGPSRGTHRDLSHRSHPYDTH* # ORIGINAL: g11287.t1 original gene structure, not modified by PASA NODE_1683_length_9762_cov_40.1747 AUGUSTUS gene 7783 8974 . + . ID=g11287;Name=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS mRNA 7783 8974 . + . ID=g11287.t1;Parent=g11287;Name=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS exon 7783 7790 . + . ID=g11287.t1.exon1;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS CDS 7783 7790 . + 0 ID=cds.g11287.t1;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS exon 7982 8093 . + . ID=g11287.t1.exon2;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS CDS 7982 8093 . + 1 ID=cds.g11287.t1;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS exon 8358 8601 . + . ID=g11287.t1.exon3;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS CDS 8358 8601 . + 0 ID=cds.g11287.t1;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS exon 8862 8974 . + . ID=g11287.t1.exon4;Parent=g11287.t1 NODE_1683_length_9762_cov_40.1747 AUGUSTUS CDS 8862 8974 . + 2 ID=cds.g11287.t1;Parent=g11287.t1 #PROT g11287.t1 g11287 MGWYDKGQIALRWRTEAEVVEGKGQFICGARKCGTVSGLESWEVNFNYVEHGETKAALVKVRLCPGCSRKLNYRHEKKRAVSGDTRSAAESRSAEDGRSEEGEHGDLPKGEERDLRKDVVEEGDEVAPRDVNVWRQPAASAEKSRADEFDEYLEGMFL* # PASA_UPDATE: g4363.t1, single gene model update, valid-1, status:[pasa:asmbl_6533,status:3], valid-1 NODE_377_length_25483_cov_42.0697 . gene 14027 17409 . + . ID=g4363;Name=g4363.t1 NODE_377_length_25483_cov_42.0697 . mRNA 14027 17409 . + . ID=g4363.t1;Parent=g4363;Name=g4363.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 14027 14139 . + . ID=g4363.t1.utr5p1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 14484 14508 . + . ID=g4363.t1.utr5p2;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 14027 14139 . + . ID=g4363.t1.exon1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 14484 14662 . + . ID=g4363.t1.exon2;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 14509 14662 . + 0 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 14804 14968 . + . ID=g4363.t1.exon3;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 14804 14968 . + 2 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 15118 15316 . + . ID=g4363.t1.exon4;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 15118 15316 . + 2 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 15433 15532 . + . ID=g4363.t1.exon5;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 15433 15532 . + 1 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 15664 16026 . + . ID=g4363.t1.exon6;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 15664 16026 . + 0 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 16189 16374 . + . ID=g4363.t1.exon7;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 16189 16374 . + 0 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 16508 16826 . + . ID=g4363.t1.exon8;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 16508 16826 . + 0 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . exon 16963 17409 . + . ID=g4363.t1.exon9;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . CDS 16963 17093 . + 2 ID=cds.g4363.t1;Parent=g4363.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 17094 17409 . + . ID=g4363.t1.utr3p1;Parent=g4363.t1 #PROT g4363.t1 g4363 MSLAFDEYGRPFIIIRDQGTRKRLTGVAAVKSHILAARSVAQTLKTSLGPKGLDKMLVSPDGEVTVTNDGATILDKMDVQHEIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEHAESLIDRGIHPIRVADGYEMAATIAVDTLDKISDIVPFDAKNTESLVETAMTTLGSKIVNKCHRQMAEIAVNAVLAVADLERKDVDFELIKMEGKVGGKLEDTCLVHGVVVDKDMSHPQMDKEITDAKIAILTCPFEPPKPKTKHKLDITSVEDYENLQKYEREVFAGMVKRVKDAGANLVICQWGFDDEANHLLLQNKLPAVRWVGGPEIELIAIATGGRIVPRFEELTAEKLGKAGRVRELTFGTTKDRMLVIEECHNSRAVTVFVRGGNKMIVEEAKRSLHDAICVVRNLVRDNRVVYGGGAAEIAASLAVYDAASKVSTIEQYAMRAFADALEATPLALAENSGLHPIEAVAAVKARQVKESNPRLGVDCVQKGTNDMREQHVIETLVGKKQQFMLATQLVKMILKIDDVMAPGDMQYQ* # PASA_UPDATE: g4364.t1, single gene model update, valid-1, status:[pasa:asmbl_6527,status:3], valid-1 NODE_377_length_25483_cov_42.0697 . gene 17604 22175 . - . ID=g4364;Name=g4364.t1 NODE_377_length_25483_cov_42.0697 . mRNA 17604 22175 . - . ID=g4364.t1;Parent=g4364;Name=g4364.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 21920 22175 . - . ID=g4364.t1.utr5p1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 20821 22175 . - . ID=g4364.t1.exon1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 20821 21919 . - 0 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 20578 20664 . - . ID=g4364.t1.exon2;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 20578 20664 . - 2 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 20102 20349 . - . ID=g4364.t1.exon3;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 20102 20349 . - 2 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 19709 19936 . - . ID=g4364.t1.exon4;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 19709 19936 . - 0 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 19426 19543 . - . ID=g4364.t1.exon5;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 19426 19543 . - 0 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 18374 19270 . - . ID=g4364.t1.exon6;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 18374 19270 . - 2 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . exon 17604 18187 . - . ID=g4364.t1.exon7;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . CDS 18099 18187 . - 2 ID=cds.g4364.t1;Parent=g4364.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 17604 18098 . - . ID=g4364.t1.utr3p1;Parent=g4364.t1 #PROT g4364.t1 g4364 MMNPLSFPAAYLVTGGTAPLPDLGRNFELQFLDTMDFKPEDALTVPALNRPFKTEITDEDSSTGDIFADACIAASATGSPFPASTSGTGLQVRVLGIPQNGAKSRVETQIKLCLQLVTASGEKVSSWNHLILPEHLVARERPSRQPKAEVALERSLYLEAHVVCASDNTKRVLTCFGCVQRERKRLRRRKDQGGQGDDACEDLTGADSMDPNDNIHADQQKILIFNCPGTVDFSSGDTILPTRITCYCRHHNEKIGFCICFTLRDSIGNIVAEGLSPPVLITDDHKSAKMRGAKRARTLSDDGMPESYSATPLSPLSPSAVSPGSSAAAAIAAAAGLNTLGMIPIEPTFILPKKASIAETDPIMLANAPMVARLIPAEGPIFGGIECTVLGSNFQAGNTVRFGDMDAYPTHFWGANTLLCIVPPALTPGPVTVTVKGQPTPPIPVLFTYKDDADRALMELALQVVGLKMTGKLEDARQVAMHIMDRSVNGERSTGSTTTTMGWDGGGSMVSLLAEAAHGSLPSDQFIDFESALLACAKYAMSDENGRVGDLSLQNEKRQCLLALAAFRGFPRLVRFLIQNGAELNLRDSNGYTALHFAAWRGDTQMVVDLLAAGALPDIAANTGTVAAELTCRDIAAVIIGAAVDHNELSEECDRLSHLTPEVNMDDFDGVETYATASLADIPLAMTIIAPTPIASSPGMQHTLASPLSPREFGDFSRVPSFCEHPAYQLGSLPPSPPSQSAPGTPPLSPSQAPLFFPRDDSFFITDAGAAASASSLSDDEDDDVDSEGTVEYISDDSGAGMAGAYAAELSRKSIGGASMAGTSSFFSFFSTYAAESAASERNTAKHGDTNVIDVAEGFASDADHYASEKHLKKMQRKRDRLLYNFWIPLFIVVVSLFVWAELQSTGWFGTRAQDGIPSYV* # PASA_UPDATE: g4362.t1, single gene model update, valid-1, status:[pasa:asmbl_6526,status:12], valid-1 NODE_377_length_25483_cov_42.0697 . gene 11943 13451 . - . ID=g4362;Name=g4362.t1 NODE_377_length_25483_cov_42.0697 . mRNA 11943 13451 . - . ID=g4362.t1;Parent=g4362;Name=g4362.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 13423 13451 . - . ID=g4362.t1.utr5p1;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 12962 12975 . - . ID=g4362.t1.utr5p2;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . exon 13423 13451 . - . ID=g4362.t1.exon1;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . exon 12872 12975 . - . ID=g4362.t1.exon2;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . CDS 12872 12961 . - 0 ID=cds.g4362.t1;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . exon 11943 12498 . - . ID=g4362.t1.exon3;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . CDS 12187 12498 . - 0 ID=cds.g4362.t1;Parent=g4362.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 11943 12186 . - . ID=g4362.t1.utr3p1;Parent=g4362.t1 #PROT g4362.t1 g4362 MVTPLKKVKIIKKRTKRFIRHQSDRYDSFTDSWRKPKGIDNRVRRRFKGQYLMPSIGYGSARKTRDMQPDGFYRFVVKNVADVELLLMQHRKYSAEIAHNVSSRKRREIIERAQQLDVKITNAAARLRSEDNE* # PASA_UPDATE: g4365.t1, single gene model update, valid-1, status:[pasa:asmbl_6534,status:3], valid-1 NODE_377_length_25483_cov_42.0697 . gene 22875 24177 . + . ID=g4365;Name=g4365.t1 NODE_377_length_25483_cov_42.0697 . mRNA 22875 24177 . + . ID=g4365.t1;Parent=g4365;Name=g4365.t1 NODE_377_length_25483_cov_42.0697 . five_prime_UTR 22875 23031 . + . ID=g4365.t1.utr5p1;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . exon 22875 23155 . + . ID=g4365.t1.exon1;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . CDS 23032 23155 . + 0 ID=cds.g4365.t1;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . exon 23442 23637 . + . ID=g4365.t1.exon2;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . CDS 23442 23637 . + 2 ID=cds.g4365.t1;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . exon 23949 24177 . + . ID=g4365.t1.exon3;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . CDS 23949 24126 . + 1 ID=cds.g4365.t1;Parent=g4365.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 24127 24177 . + . ID=g4365.t1.utr3p1;Parent=g4365.t1 #PROT g4365.t1 g4365 MALKAHCFALVVCQRKSDGKFIAVNETNARGWWLPGGTVETGESFEQAALRETFEEAGARVRLEGVLRVEQTVIEDRIRMRVIYYARPIDEATPLKSVADKESDGAQWVSGAELRTLGKIRSSELPDWIEYVESGGVVYPLDLVTTESAPVQKRKSVISGPFPCQ* # PASA_UPDATE: g4360.t1, single gene model update, valid-1, status:[pasa:asmbl_6525,status:12], valid-1 NODE_377_length_25483_cov_42.0697 . gene 2230 8595 . - . ID=g4360;Name=g4360.t1 NODE_377_length_25483_cov_42.0697 . mRNA 2230 8595 . - . ID=g4360.t1;Parent=g4360;Name=g4360.t1 NODE_377_length_25483_cov_42.0697 . exon 3742 8595 . - . ID=g4360.t1.exon1;Parent=g4360.t1 NODE_377_length_25483_cov_42.0697 . CDS 3742 8595 . - 0 ID=cds.g4360.t1;Parent=g4360.t1 NODE_377_length_25483_cov_42.0697 . exon 2230 3516 . - . ID=g4360.t1.exon2;Parent=g4360.t1 NODE_377_length_25483_cov_42.0697 . CDS 2476 3516 . - 0 ID=cds.g4360.t1;Parent=g4360.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 2230 2475 . - . ID=g4360.t1.utr3p1;Parent=g4360.t1 #PROT g4360.t1 g4360 MSKLFSSLSRSGKGSKSDLVSTEESGPPSPSARPKSSFFGRRKSTFEAQADVSQPHTEAQRAPSLDESSNWVDEWDDGPVDGYASDGASDAAAHHAQNCEGESVEAGANNEDDEEVYDIPQALSSSGRSLSAALQNARQAPPAAPTNSQPTDGDTYEMPASKPITRPMSVSKPPIRPVSVASPPVSVASPPVRASGVAHQSSLTRGDSNADDDDGDLYHMPQATQQQQNSSSMPRPRIPSAIIAAPVPTEDAEEDDEVYDIPQAKPQRAVNPGRLSAAYPSISAPEPPASASASASVGVNASTGRPPSVKMAPLPLPPSQASPQSATVARPNSIAYPKIPSPQVPSHARPQSISYPKIPAPVPPVDATSAALSSPSPGYGSPLAPMLPSMQQMRKRSSETISLTSSPYQTQSSQPAYEEEVYDIPQPLAAGRRASDEPKPGVKKGSTGAAISEADVAAVLSKIPANAVADRISDMYATPDDVAVALAHLRDGPNERVSEKYAIPDDAAAAALAALPSGPTERVSDLYATPEDVAFALSRLPDGPAERVSERYAIPEDAAAAALRTLPSGPSVRVSDTYAVPEDVAAAALAALPQGMNDRVSDVYVLPDTLASTNLPRRPSDQGRIGVIVETASPVGYISVTTVSHAGGTGTDDDGSVQSPYAIVRHPSVDADSSVERKPSKEYVATLLRKMSTENDSLPAALPANDSAPSVRTNSLTLPDPNDDAVRVRRTSSLTEPVPEERRGSYEQQQPSPQQQQPPLSPREDSPHIRERTTRLTKQSAIPVSAVRRESNTAAASSQAQVLSTTTLSQPQTQPAAAVPVTPEHHVTAAPVHKKKPMVPLPSSSGTPVSTSASTPTIAPPPSSTQSSKIPVRKERSESNPAQPAGLSPRGRSESLSGETTSTERRASNSSSDTQSNVARPVTGVSVVPRRPTIEGGRPLTAKQAANALAAPKRPGSRPPIRPKPAHLAPQRKSVHVDSDAYDDDATVERVDASPTESLDSSTVAAYEHDVAVVDPSVGTISHVSARGTEVVSSSYNESVPTEVPVVTSDSSEVAFVTLESSNAADENGTVVATDSRVVEADSAVDADVHIEEPAPLEETEDAHIEPEEPPHVHIEKPTVPEGTAAEPAEDHTEPKWTADAHVEPEDAAGIQIEESAAPEWSADAHIEPEETAGVHIVEPAAVTTFDDGPEEVVCDYYTTSFDAAPTQNDSTMKEAADSSAIGSLASDAHVESSSDCQQPTVTTDEDDAQEASRAAIAEPVPSKSFSAEDSSASVDGAGRIEESVNSEALAVSRHTNVCVDATVDVSHEAPTEEQPVDSAVDTADISGHGDTKTAVGAVASPVAQMTHTDADVTNNMRHSYVPTASRPASQSEPSRVVITWTPAGVSQAVGDGVFALPTKSANAVRPLRPNSRSKPVSKSAIPGEQPHPVAASVVPAAADSLSLGDKDGQRTADDSQRPPTVDVTLATRVTDAQSTHSELKVPTAESDSIARTTLSAGGAVSRPPSGVMRAFTVAPPAAPASKEMAEDGRPASTVGRPPGKLDSRFFVPGAVLPVPIAPPVAPVAPIAPTAPTAPAIVTPAATNISHRPPSMTPTTVTSVTIGVAHPAAPAIPTQASSVPSPQMQTAETDANDDDEFDETANEPLVAEEESEEEVAATAADVSPAHMRSPLLQALKNAGAPPPVPTSPRGGSTPQTAHTLQPGNAHSASNPPPLPASSAPRESSFVEASVPSSRPHTIVGIDSGAVLASADASAPGGSPSATRSYPAGIATKDKDKRSSAIPLSFKKLFKGSDSKHKNTVADLLARSPTVVSVVVGRQVYRPSDSDHLMFDFNETLTIMNIGPECPRGTWLATNAKGQAGFVPSALVAMDADAVRKRMMEEAKRTKELQNAAAAAAVTAAAASVTAPIADEDEEEEDDNYASIKHAGRPTVAEEPEFEEEIYDDIGEAAVVEDADEDPIYESAD* # ORIGINAL: g4361.t1 original gene structure, not modified by PASA NODE_377_length_25483_cov_42.0697 AUGUSTUS gene 9434 10665 . + . ID=g4361;Name=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS mRNA 9434 10665 . + . ID=g4361.t1;Parent=g4361;Name=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS exon 9434 9452 . + . ID=g4361.t1.exon1;Parent=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS CDS 9434 9452 . + 0 ID=cds.g4361.t1;Parent=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS exon 9892 10060 . + . ID=g4361.t1.exon2;Parent=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS CDS 9892 10060 . + 2 ID=cds.g4361.t1;Parent=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS exon 10593 10665 . + . ID=g4361.t1.exon3;Parent=g4361.t1 NODE_377_length_25483_cov_42.0697 AUGUSTUS CDS 10593 10665 . + 1 ID=cds.g4361.t1;Parent=g4361.t1 #PROT g4361.t1 g4361 MAEHKREVRFTEKEMDDLHIAHAWRDNCVHLLVPLNNCRRENYYLPWRCSHERHAYDKCQYEEYLERMKEAKRQKAIKSLADAKQS* # PASA_UPDATE: g4359.t1, single gene model update, valid-1, status:[pasa:asmbl_6530,status:12], valid-1 NODE_377_length_25483_cov_42.0697 . gene 177 1948 . + . ID=g4359;Name=g4359.t1 NODE_377_length_25483_cov_42.0697 . mRNA 177 1948 . + . ID=g4359.t1;Parent=g4359;Name=g4359.t1 NODE_377_length_25483_cov_42.0697 . exon 177 341 . + . ID=g4359.t1.exon1;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . CDS 177 341 . + 0 ID=cds.g4359.t1;Parent=g4359.t1;5_prime_partial=true NODE_377_length_25483_cov_42.0697 . exon 590 748 . + . ID=g4359.t1.exon2;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . CDS 590 748 . + 0 ID=cds.g4359.t1;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . exon 947 1082 . + . ID=g4359.t1.exon3;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . CDS 947 1082 . + 0 ID=cds.g4359.t1;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . exon 1405 1494 . + . ID=g4359.t1.exon4;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . CDS 1405 1494 . + 2 ID=cds.g4359.t1;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . exon 1698 1948 . + . ID=g4359.t1.exon5;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . CDS 1698 1831 . + 2 ID=cds.g4359.t1;Parent=g4359.t1 NODE_377_length_25483_cov_42.0697 . three_prime_UTR 1832 1948 . + . ID=g4359.t1.utr3p1;Parent=g4359.t1 #PROT g4359.t1 g4359 ALLDETFFHENALVEKSFPSEEDDRFNTLIDALAKPSQLCEAYVAALTTASPETKLSPKDDVRTPTNTVCVLGAEMAEVLLWRVGALFYMYGHTVVNDAARISSLKKECLDRGISNLVTMLSMRSAVPGDPFERPPPPQSPEDKHQVEQFMREGIMSDTHLLALAYCGEMAYWQWKLFAKGTDDAAHARDVAIKALKKYIRVVHELLDAMQQHWDTSRPFQMLQELC* # ORIGINAL: g10179.t1 original gene structure, not modified by PASA NODE_2621_length_5640_cov_39.4482 AUGUSTUS gene 1761 4052 . + . ID=g10179;Name=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS mRNA 1761 4052 . + . ID=g10179.t1;Parent=g10179;Name=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 1761 1940 . + . ID=g10179.t1.exon1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 1761 1940 . + 0 ID=cds.g10179.t1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 2248 2437 . + . ID=g10179.t1.exon2;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 2248 2437 . + 0 ID=cds.g10179.t1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 2768 2889 . + . ID=g10179.t1.exon3;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 2768 2889 . + 2 ID=cds.g10179.t1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 3216 3348 . + . ID=g10179.t1.exon4;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 3216 3348 . + 0 ID=cds.g10179.t1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 3496 3615 . + . ID=g10179.t1.exon5;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 3496 3615 . + 2 ID=cds.g10179.t1;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS exon 3868 4052 . + . ID=g10179.t1.exon6;Parent=g10179.t1 NODE_2621_length_5640_cov_39.4482 AUGUSTUS CDS 3868 4052 . + 2 ID=cds.g10179.t1;Parent=g10179.t1 #PROT g10179.t1 g10179 MYFHWLFCTAQVTIMGIINNMIPFVLVAWAESKPTVNVGVASVLDSAIPLFAQLFGHFMLKHEEKMTKQRVIGMVVGFGGVFVVCAEKMFDVGGDAKDSDCKACTIGYYIMIIVACASYGLASVYGKKYLSDCCSIVLASGQIISGSIVTSIIAVAWEFNYPVDSFKGQTHFSFMSEASARAWISIAYLGAVSTCIAYLLYFYLLATIGSVKQTMVGFLLPVFGIFVGVLFEDDWAGVSWVYKFLEILGAVLICGGIYFVNFGVATKHDPDPLNCEGPTEEKEALLGGSSSNLGRSDSIDSGIADYGTV* # PASA_UPDATE: g8294.t1, single gene model update, valid-1, status:[pasa:asmbl_5520,status:12], valid-1 NODE_3077_length_4378_cov_33.3014 . gene 259 4258 . - . ID=g8294;Name=g8294.t1 NODE_3077_length_4378_cov_33.3014 . mRNA 259 4258 . - . ID=g8294.t1;Parent=g8294;Name=g8294.t1 NODE_3077_length_4378_cov_33.3014 . five_prime_UTR 4236 4258 . - . ID=g8294.t1.utr5p1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 4128 4258 . - . ID=g8294.t1.exon1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 4128 4235 . - 0 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 3220 3942 . - . ID=g8294.t1.exon2;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 3220 3942 . - 0 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 2878 2980 . - . ID=g8294.t1.exon3;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 2878 2980 . - 0 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 2380 2552 . - . ID=g8294.t1.exon4;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 2380 2552 . - 2 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 2002 2052 . - . ID=g8294.t1.exon5;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 2002 2052 . - 0 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 1311 1456 . - . ID=g8294.t1.exon6;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 1311 1456 . - 0 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 1042 1141 . - . ID=g8294.t1.exon7;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 1042 1141 . - 1 ID=cds.g8294.t1;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . exon 259 677 . - . ID=g8294.t1.exon8;Parent=g8294.t1 NODE_3077_length_4378_cov_33.3014 . CDS 259 677 . - 0 ID=cds.g8294.t1;Parent=g8294.t1;3_prime_partial=true #PROT g8294.t1 g8294 MGSSPDLTKPFRLDPLNYEQSREAADSVSPRPPSTEPPSRFKRRSRSASSLSREQSVDMAADDDDDWNPPVSRTQQAAPTPDERPPRSAPRSANAVVSAAATGALPPQQSTPRRKTSEPSVKTTTFADEQGGALEARSSGRSDAQPQSQSHRDAREPSAGIGAGTGVGAGAGAGAGGQEASQRPTSGSSARAVRPDSAVDGDEICPEWQEAESLLAVLDPDEPNLDAMCEACDGLWAVVQRKRFAGRQRNAILRSMYRLMDSPDARLLIKLCRVVLRVTKGGTTLFNACKMLFKLSRVESNDSHFQDCGMIELLVSILGNADKRATADALVFCAGILKNLSNDDTAQRLLAKAGCIDIVARLLAMVNSKDPEIMAGGDSVGHLLFQLTAMLRNLAVNAGHRKHFLSSRVIELLCPLLRTHAHDGDLVLNISRILSKLTMHAECRAAIGVIPDTIECIVALLERHAKNKAIVTRLCFVLGNLTANNDDNRIALFTKHNALDRLMGLLCMYDTIDRNEENALERERERETGDGSSASAAASGASEDMHGNVRGGGRGDIDDDGNGGEGSASGDVGGENGRPSSLSASAGSHVAGKKKGSYNETEDVLIK # ORIGINAL: g2895.t1 original gene structure, not modified by PASA NODE_7567_length_426_cov_129.798_potentialcontaminant AUGUSTUS gene 18 362 . - . ID=g2895;Name=g2895.t1 NODE_7567_length_426_cov_129.798_potentialcontaminant AUGUSTUS mRNA 18 362 . - . ID=g2895.t1;Parent=g2895;Name=g2895.t1 NODE_7567_length_426_cov_129.798_potentialcontaminant AUGUSTUS exon 18 362 . - . ID=g2895.t1.exon1;Parent=g2895.t1 NODE_7567_length_426_cov_129.798_potentialcontaminant AUGUSTUS CDS 18 362 . - 0 ID=cds.g2895.t1;Parent=g2895.t1 #PROT g2895.t1 g2895 MVMAAKHRKQTNKKTKGVRQDSDEDGTLGVWKNEGTVSVHGCERKGHVSVLFDSGAATCAVSRAACRRFRLPIDDPTADDTAFQGIGKGLIRAVGRIAEGVSLRIGVHGVTQLEG # ORIGINAL: g11904.t1 original gene structure, not modified by PASA NODE_2261_length_7013_cov_36.4409 AUGUSTUS gene 1083 1888 . - . ID=g11904;Name=g11904.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS mRNA 1083 1888 . - . ID=g11904.t1;Parent=g11904;Name=g11904.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS exon 1595 1888 . - . ID=g11904.t1.exon1;Parent=g11904.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS CDS 1595 1888 . - 0 ID=cds.g11904.t1;Parent=g11904.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS exon 1083 1472 . - . ID=g11904.t1.exon2;Parent=g11904.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS CDS 1083 1472 . - 0 ID=cds.g11904.t1;Parent=g11904.t1 #PROT g11904.t1 g11904 MLRAGTDNDHKEQFACHASADKLATILSKNGKISTAGCPPKATTNNANVGHHMRIATKCNATSQPALRRSPRTKAALNSMGHVGGMTTVDTAEDTTTTRRDASSVDAVSVEPASKRARMDVNNDATCTANPPLQSHLQSVPMPLPVTATSAPADMHGAFGGNHSDDAASECGSDEDIDELFLAEKELVQSLVRDAFYGRGSLHCAAARVHGDVLAGGGRMVWTVCDC* # ORIGINAL: g11903.t1 original gene structure, not modified by PASA NODE_2261_length_7013_cov_36.4409 AUGUSTUS gene 48 1045 . - . ID=g11903;Name=g11903.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS mRNA 48 1045 . - . ID=g11903.t1;Parent=g11903;Name=g11903.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS exon 48 1045 . - . ID=g11903.t1.exon1;Parent=g11903.t1 NODE_2261_length_7013_cov_36.4409 AUGUSTUS CDS 48 1045 . - 0 ID=cds.g11903.t1;Parent=g11903.t1 #PROT g11903.t1 g11903 MYPADAEFQRVTCDLVCRMTQDSLRRTAVARDGGIAALVSFIRTYTTIGSAGIRGGSGMDVSVGGASGGDNADEEGMEDTLADACTALTRLVDYDSRYCASAGEEGAVEAAVCALLAHIRNSNIVSRALSLLQSLCTVAQNRRRLGSAGGVVPIVTCLHVYDLDVRIPQQAMELLAHLSTSREFGDAIVQQGGLTLVLAFVQQKPKDDCIVNYGIDTIASLAHNPECCAAMIACGMIRTVVTRMDAIMGRKRDVDASYMLLLQSMAAHSQDAAASIVSTNAVITVIAAMARSMNNSALLAHACDLLGRLSPHTDIYAEGAFVVFLRSLLVHR # PASA_UPDATE: g223.t1, single gene model update, valid-1, status:[pasa:asmbl_7451,status:12], valid-1 NODE_4580_length_1434_cov_36.0787 . gene 769 1350 . - . ID=g223;Name=g223.t1 NODE_4580_length_1434_cov_36.0787 . mRNA 769 1350 . - . ID=g223.t1;Parent=g223;Name=g223.t1 NODE_4580_length_1434_cov_36.0787 . exon 769 1350 . - . ID=g223.t1.exon1;Parent=g223.t1 NODE_4580_length_1434_cov_36.0787 . CDS 1051 1350 . - 0 ID=cds.g223.t1;Parent=g223.t1 NODE_4580_length_1434_cov_36.0787 . three_prime_UTR 769 1050 . - . ID=g223.t1.utr3p1;Parent=g223.t1 #PROT g223.t1 g223 MPAALGRSGYMDKISGGKHVKPKWDKRWFELEDAMLHYYKARGGKCQGTILLRNCTLVSDPAVPKIIQLNDVERIWQLRTSSEAEAMEWKDSIWALCKP* # ORIGINAL: g11469.t1 original gene structure, not modified by PASA NODE_2195_length_7323_cov_42.4292 AUGUSTUS gene 2383 6085 . + . ID=g11469;Name=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS mRNA 2383 6085 . + . ID=g11469.t1;Parent=g11469;Name=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 2383 2697 . + . ID=g11469.t1.exon1;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 2383 2697 . + 0 ID=cds.g11469.t1;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 2865 3152 . + . ID=g11469.t1.exon2;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 2865 3152 . + 0 ID=cds.g11469.t1;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 3402 3894 . + . ID=g11469.t1.exon3;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 3402 3894 . + 0 ID=cds.g11469.t1;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 4165 4332 . + . ID=g11469.t1.exon4;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 4165 4332 . + 2 ID=cds.g11469.t1;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 4422 6085 . + . ID=g11469.t1.exon5;Parent=g11469.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 4422 6085 . + 2 ID=cds.g11469.t1;Parent=g11469.t1 #PROT g11469.t1 g11469 MLRLSPRITLCARRGRASGAVPHLCARHVHSGASGGRPGAAHSVFYRGEGPLDADALAANGASRIRDDFIAYFVARGHVHVPSSSLVPTNDPTLLFTNAGMVQFKDYFLGLAPPPHRRAVTAQRCLRAGGKHNDLDNVGYTPRHHTFFEMLGNFSFGDYFKAEAVPFAWEYLVGRLKLPSDRIRVTVYDKDDETYALWRDKVGIPESQIVRMGAATNFWSMGDGPGPCGPCTEILWDLRNGRPLDDDDRWLELWNVVFMEFQRASTGDSALSPLQVPCIDTGMGLERIAAVLQGAQTNFETDVLRTLVRAAGSLFPAGSTLAPGTLNVIADHTRAVGNLIADGVVPRQAVTCILHFLVSRGTGSNKPFLHRLLPALAEASDPETRVLLTAQSSQIADIIRIEEESFGTVLKRGIHALNKAIGDATEGVLPAKVAFHLQESLGMPLDITRTVARQRGLSIDESAVEVLANAHRYASRSAVSKAPPADGARAASNSPRNSPDPSIAGIGGHRSAALAVAKEWAVRGLTSVFVGYDAIHGVECTVLAAAPNATEPGSLVAMVDRNPFYAAGGGQVSDTGALAVQTRHSAEVRFRVVEVLQASEGGTLLKLMPENDQLFNISEDACAALVLCSGVASVDAARRARIASHHTATHIVHAVLMDVLGLRRPGVGVQAGSHVDQDGLRFDFSHSKPLKMEDIVEIERRVNDIIEADLPVATVTVPIADARAAGAVAAFGEKYGSAVRMVSVNGCSRELCGGTHAKSTGDLRMFRIISESAVAAGTRRLQAVCGRAAINLSLRQAQGLAATAMSLKSSADVGAVLGAVEALSMRLREARQAAEMYQRRLAVEGNANMTRGEAARLMSGRLPDTLGGLSVEVRCMHPDEDTEFLRERMVALCASTQPSSVHILVAGQRVLCCFGEHVTRVNALTKSALTPTAVMKRVFEGCGVQGGGHPIAQGKMAVDADAWMGSVALILGAVL* # PASA_UPDATE: g11470.t1, single gene model update, valid-1, status:[pasa:asmbl_3728,status:12], valid-1 NODE_2195_length_7323_cov_42.4292 . gene 6246 7228 . + . ID=g11470;Name=g11470.t1 NODE_2195_length_7323_cov_42.4292 . mRNA 6246 7228 . + . ID=g11470.t1;Parent=g11470;Name=g11470.t1 NODE_2195_length_7323_cov_42.4292 . five_prime_UTR 6246 6423 . + . ID=g11470.t1.utr5p1;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . exon 6246 6538 . + . ID=g11470.t1.exon1;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . CDS 6424 6538 . + 0 ID=cds.g11470.t1;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . exon 6699 6887 . + . ID=g11470.t1.exon2;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . CDS 6699 6887 . + 2 ID=cds.g11470.t1;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . exon 7033 7228 . + . ID=g11470.t1.exon3;Parent=g11470.t1 NODE_2195_length_7323_cov_42.4292 . CDS 7033 7228 . + 2 ID=cds.g11470.t1;Parent=g11470.t1;3_prime_partial=true #PROT g11470.t1 g11470 MPMDVSDLPFKVPNIEEISLEATGAHSNEAALQYLESFGRQCEDGVLFTDNMLVNTESGRVAGESTVAVEKAVYRGEECYGIISHSQARLSEEASVGLSLTAYISFNLETLRQECHQFVKINDRLQEKRSFVAIEDNFLVVAASEVDGSLNIAKYDRSAVKGFISE # ORIGINAL: g11468.t1 original gene structure, not modified by PASA NODE_2195_length_7323_cov_42.4292 AUGUSTUS gene 71 1942 . - . ID=g11468;Name=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS mRNA 71 1942 . - . ID=g11468.t1;Parent=g11468;Name=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 1793 1942 . - . ID=g11468.t1.exon1;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 1793 1942 . - 0 ID=cds.g11468.t1;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 1361 1467 . - . ID=g11468.t1.exon2;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 1361 1467 . - 0 ID=cds.g11468.t1;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 964 1092 . - . ID=g11468.t1.exon3;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 964 1092 . - 1 ID=cds.g11468.t1;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 389 755 . - . ID=g11468.t1.exon4;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 389 755 . - 1 ID=cds.g11468.t1;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS exon 71 145 . - . ID=g11468.t1.exon5;Parent=g11468.t1 NODE_2195_length_7323_cov_42.4292 AUGUSTUS CDS 71 145 . - 0 ID=cds.g11468.t1;Parent=g11468.t1 #PROT g11468.t1 g11468 MGLLSLGTPLAWEEAKKYADHVRRHGIAQFLSIHRRLKDRTGDSLKWGDEVEYIVGSLDPTQRTAQVSLRCPEMLRDMNEEENNAGPDDILDSLWRPEYGSFMIEGTPGRPYGSTVRDFVTVEANMHKRRLHLRDYLKGSEVALTVTSFPRLGCDHFTDPQTAPQGPYAQSLFFPDDAINPHKRFPTLSANIRERRVRRVVINVPIYKDINTPSPYVEAVANADTEFAAAVKPDHIYMDAMGFGMGCCCLQATFQACSIDEARHLYDQLAVLSPIM # PASA_UPDATE: g9744.t1, single gene model update, valid-1, status:[pasa:asmbl_156,status:12], valid-1 NODE_1041_length_14454_cov_42.8367 . gene 8502 11821 . + . ID=g9744;Name=g9744.t1 NODE_1041_length_14454_cov_42.8367 . mRNA 8502 11821 . + . ID=g9744.t1;Parent=g9744;Name=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 8502 8521 . + . ID=g9744.t1.exon1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 8502 8521 . + 0 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 8600 8701 . + . ID=g9744.t1.exon2;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 8600 8701 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 8882 9037 . + . ID=g9744.t1.exon3;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 8882 9037 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 9165 9321 . + . ID=g9744.t1.exon4;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 9165 9321 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 9490 9637 . + . ID=g9744.t1.exon5;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 9490 9637 . + 0 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 9819 9953 . + . ID=g9744.t1.exon6;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 9819 9953 . + 2 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 10122 10338 . + . ID=g9744.t1.exon7;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 10122 10338 . + 2 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 10478 10516 . + . ID=g9744.t1.exon8;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 10478 10516 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 10683 10796 . + . ID=g9744.t1.exon9;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 10683 10796 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 11009 11136 . + . ID=g9744.t1.exon10;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 11009 11136 . + 1 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 11302 11403 . + . ID=g9744.t1.exon11;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 11302 11403 . + 2 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . exon 11510 11821 . + . ID=g9744.t1.exon12;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . CDS 11510 11520 . + 2 ID=cds.g9744.t1;Parent=g9744.t1 NODE_1041_length_14454_cov_42.8367 . three_prime_UTR 11521 11821 . + . ID=g9744.t1.utr3p1;Parent=g9744.t1 #PROT g9744.t1 g9744 MMRRQSTVPGEARVIRFKTTFRTTIYDVLKWRAPLWQEIKEGGDWDIFWADVTSMKESFDNFHMEDHMRINHFRNHYELTKKNMLVKNMKRHRKLIERECGKTEALAYDFLPTTFEMPGEYALFVEEFRRCPKSAWIMKPAGRAQGKGIFLFNKLSQITDWKNDYRWTADKRDDKEPVEAYIAQRYIENPLLVGGKKFDLRIYVLVTSYVPLVVWLYRSGFARFSSTRFSMDFKEITNNYIHLTNVAIQKKSATYDNEKGCKWPLHRLKTYLVSRFGQETVKTLFNDMQSLILRSLLGVQKIMINDKHCFELYGYDILIDDTLKPWLLEVNASPSLTADTAEDHELKFVMLNEMLNIIDMDKKLTGNEKRVGGFDIIWKDGPTDQPDLIGQVDPLRPTLPQSTYLGCEYSLKKPSRQPPRPAAQAEKKPPPTGMHAPTSALA* # ORIGINAL: g9742.t1 original gene structure, not modified by PASA NODE_1041_length_14454_cov_42.8367 AUGUSTUS gene 4108 5625 . + . ID=g9742;Name=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS mRNA 4108 5625 . + . ID=g9742.t1;Parent=g9742;Name=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 4108 4210 . + . ID=g9742.t1.exon1;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 4108 4210 . + 0 ID=cds.g9742.t1;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 4447 4526 . + . ID=g9742.t1.exon2;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 4447 4526 . + 2 ID=cds.g9742.t1;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 4714 5073 . + . ID=g9742.t1.exon3;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 4714 5073 . + 0 ID=cds.g9742.t1;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 5335 5625 . + . ID=g9742.t1.exon4;Parent=g9742.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 5335 5625 . + 0 ID=cds.g9742.t1;Parent=g9742.t1 #PROT g9742.t1 g9742 MQTKLLSNSNAGYMSLDYKDWKYEDRRSMQEIVQGSTGTNNEQHHLYVTAGVFLGSYGSSRVEQLRANQITHVVCVRSRAEAQCIRPRHPAEFHYVTLDIVDRIDTNILQFFDSLNRHIDRVRAEGGRLLVHGNLGISRSAALVIAYVMQSLGLDSANALCLVQQRRFCVNPNEGFMRQLMEYEAIYRAAAMYPAAPTTSVNMLGGASLMVVSAPKGMKRAAETDEDTDDDELGGYNFDGAISAFDGNSHLTDRSYFPGVKQFRADEEDTGDIVMMS* # ORIGINAL: g9745.t1 original gene structure, not modified by PASA NODE_1041_length_14454_cov_42.8367 AUGUSTUS gene 11623 12809 . - . ID=g9745;Name=g9745.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS mRNA 11623 12809 . - . ID=g9745.t1;Parent=g9745;Name=g9745.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 12693 12809 . - . ID=g9745.t1.exon1;Parent=g9745.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 12693 12809 . - 0 ID=cds.g9745.t1;Parent=g9745.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 11623 12345 . - . ID=g9745.t1.exon2;Parent=g9745.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 11623 12345 . - 0 ID=cds.g9745.t1;Parent=g9745.t1 #PROT g9745.t1 g9745 MRKIISTGRIAETDITADAALEEDEYDGKEHKDCILSPAEVAFCDDACILRYLRARDWSVKKAADMLRQTLLWRRDFGVDQLRASDPAIRSCINMGKMYVSGYDSEKRACCVMRVHTAPDPHENVDKMRFMVYTMEMAIRALDRHGGVQAMTWLVCLDGYNLRYNGDVRFALELLSILQNHYPERLGHVLMIDAPWVFRMAWNTLWPFINEKTQKKIAFITRPNERDALSQYFSDLGQIERLFGGDSDYVFNADEYIGALQAKLEEKDMSAPYVPFTPR* # PASA_UPDATE: g9741.t1, single gene model update, valid-1, status:[pasa:asmbl_159,status:3], valid-1 NODE_1041_length_14454_cov_42.8367 . gene 2407 3476 . - . ID=g9741;Name=g9741.t1 NODE_1041_length_14454_cov_42.8367 . mRNA 2407 3476 . - . ID=g9741.t1;Parent=g9741;Name=g9741.t1 NODE_1041_length_14454_cov_42.8367 . five_prime_UTR 3344 3476 . - . ID=g9741.t1.utr5p1;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . exon 3292 3476 . - . ID=g9741.t1.exon1;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . CDS 3292 3343 . - 0 ID=cds.g9741.t1;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . exon 2991 3081 . - . ID=g9741.t1.exon2;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . CDS 2991 3081 . - 2 ID=cds.g9741.t1;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . exon 2407 2785 . - . ID=g9741.t1.exon3;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . CDS 2623 2785 . - 1 ID=cds.g9741.t1;Parent=g9741.t1 NODE_1041_length_14454_cov_42.8367 . three_prime_UTR 2407 2622 . - . ID=g9741.t1.utr3p1;Parent=g9741.t1 #PROT g9741.t1 g9741 MVCPACVAPAVAFGWPFVLARFRKRPFLAGAITLVGASATVATVYYYWTGVLSFGAPRDPGEGTQPLDTPDAPAAVTDARIHPAGSQNVTAGAGGACKNCH* # PASA_UPDATE: g9739.t1, single gene model update, valid-1, status:[pasa:asmbl_158,status:12], valid-1 NODE_1041_length_14454_cov_42.8367 . gene 9 619 . + . ID=g9739;Name=g9739.t1 NODE_1041_length_14454_cov_42.8367 . mRNA 9 619 . + . ID=g9739.t1;Parent=g9739;Name=g9739.t1 NODE_1041_length_14454_cov_42.8367 . five_prime_UTR 9 9 . + . ID=g9739.t1.utr5p1;Parent=g9739.t1 NODE_1041_length_14454_cov_42.8367 . exon 9 619 . + . ID=g9739.t1.exon1;Parent=g9739.t1 NODE_1041_length_14454_cov_42.8367 . CDS 10 594 . + 0 ID=cds.g9739.t1;Parent=g9739.t1;5_prime_partial=true NODE_1041_length_14454_cov_42.8367 . three_prime_UTR 595 619 . + . ID=g9739.t1.utr3p1;Parent=g9739.t1 #PROT g9739.t1 g9739 VCVCVCVCVCVCVCVCVCVCVYSVCVCMCVCVCMCVRVCVCVRVCVCVCECARESEMACFLRSTRLLPPRSLLQKSTVESLGTVPKTLTWLCGLLKTPPSFDARTSVTRRCVQAPHLLTNHSMPSHFAHMWYITIQIMALLAVRRRISKDETVDISAIGAKFGVSAVEVDAIFKNFCEVVPMLNSKGQGYAQWR* # ORIGINAL: g9740.t1 original gene structure, not modified by PASA NODE_1041_length_14454_cov_42.8367 AUGUSTUS gene 1000 2174 . - . ID=g9740;Name=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS mRNA 1000 2174 . - . ID=g9740.t1;Parent=g9740;Name=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 1986 2174 . - . ID=g9740.t1.exon1;Parent=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 1986 2174 . - 0 ID=cds.g9740.t1;Parent=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 1478 1820 . - . ID=g9740.t1.exon2;Parent=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 1478 1820 . - 0 ID=cds.g9740.t1;Parent=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 1000 1148 . - . ID=g9740.t1.exon3;Parent=g9740.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 1000 1148 . - 2 ID=cds.g9740.t1;Parent=g9740.t1 #PROT g9740.t1 g9740 MASDDEDTPQLSGAALAALQQFYAEEESRHARLAAMQAAAVDAAAVAPTMEPFSEDWQLSQFWYSDDTARRLAEEVIAVLPPGGRILCLSTPTLFVKLRELGCESMSLLEYDRRFDVYPNYYYYDYRAPLDLPDELLRTSFDVAVVDPPFLSEECQRKSAETVARLCRTDAKIIVCTGAIMTDVIHSLYNAQPCAFRPSHKGNLANDFRCFANYSGSLGFESDAAP* # ORIGINAL: g9743.t1 original gene structure, not modified by PASA NODE_1041_length_14454_cov_42.8367 AUGUSTUS gene 6528 7525 . - . ID=g9743;Name=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS mRNA 6528 7525 . - . ID=g9743.t1;Parent=g9743;Name=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 7470 7525 . - . ID=g9743.t1.exon1;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 7470 7525 . - 0 ID=cds.g9743.t1;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 6985 7302 . - . ID=g9743.t1.exon2;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 6985 7302 . - 1 ID=cds.g9743.t1;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 6784 6866 . - . ID=g9743.t1.exon3;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 6784 6866 . - 1 ID=cds.g9743.t1;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS exon 6528 6646 . - . ID=g9743.t1.exon4;Parent=g9743.t1 NODE_1041_length_14454_cov_42.8367 AUGUSTUS CDS 6528 6646 . - 2 ID=cds.g9743.t1;Parent=g9743.t1 #PROT g9743.t1 g9743 MATETTLFRAPSKDLTSVFIPSAGGARNYTVSAPCGSGADQRLSVERRDSDSSSVTSDDGQELDLALHARCFPSPGSADALAFTMHAMGGEGPRGGRWRGFATARGTMYVDAPPLSQLTFESKKGFLRLIDHIEALGCRELVVVVDRDRADKDEVEKTFFYLGFTRVTLAVHPSAVRCNGMDCLSFDLAVC* # ORIGINAL: g1805.t1 original gene structure, not modified by PASA NODE_16626_length_232_cov_157.185 AUGUSTUS gene 2 232 . + . ID=g1805;Name=g1805.t1 NODE_16626_length_232_cov_157.185 AUGUSTUS mRNA 2 232 . + . ID=g1805.t1;Parent=g1805;Name=g1805.t1 NODE_16626_length_232_cov_157.185 AUGUSTUS exon 2 232 . + . ID=g1805.t1.exon1;Parent=g1805.t1 NODE_16626_length_232_cov_157.185 AUGUSTUS CDS 2 232 . + 1 ID=cds.g1805.t1;Parent=g1805.t1 #PROT g1805.t1 g1805 AFNYVFRNSLSLTAAGDGTAFTNAVNAAKLAENIDFPESSLEAMLQAAACKNIVKWRADSRRMIFLVTDADPHMAG # PASA_UPDATE: g4410.t1, single gene model update, valid-1, status:[pasa:asmbl_1978,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 18829 20799 . - . ID=g4410;Name=g4410.t1 NODE_155_length_34230_cov_48.062 . mRNA 18829 20799 . - . ID=g4410.t1;Parent=g4410;Name=g4410.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 20784 20799 . - . ID=g4410.t1.utr5p1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . exon 20713 20799 . - . ID=g4410.t1.exon1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . CDS 20713 20783 . - 0 ID=cds.g4410.t1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . exon 20490 20580 . - . ID=g4410.t1.exon2;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . CDS 20490 20580 . - 1 ID=cds.g4410.t1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . exon 20177 20344 . - . ID=g4410.t1.exon3;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . CDS 20177 20344 . - 0 ID=cds.g4410.t1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . exon 19885 19997 . - . ID=g4410.t1.exon4;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . CDS 19885 19997 . - 0 ID=cds.g4410.t1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . exon 18829 19547 . - . ID=g4410.t1.exon5;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . CDS 18989 19547 . - 1 ID=cds.g4410.t1;Parent=g4410.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 18829 18988 . - . ID=g4410.t1.utr3p1;Parent=g4410.t1 #PROT g4410.t1 g4410 MRIPMALLSYGTCASAACIIIVLSVIGCASASSGDRSVDFRQCIEECIAGTCREERQDGIPIPFRLLRWTCVDECRYDCMWRCTDDDVVLSRPVRQYYGKWPFKRFLGMQEPVSVLFSVFNGAMHVRGLIRFLRDSPRRDSMRLIWIGYAVASVNLWLWSAVYHARDFLWTERLDYFAGTIAIMYSLHAAVIRTLGVTRTPARAAILVAFAYWAVRHIQYQISLGDRFDYGYNMTVGLAAAFAHAVLWFGWMAYAYFARKKRYVAMGAYALCGVAAAMVFEIFDFPPIAWAVDAHALWHIGTVPFILPWYAFLAEDARDRTASVVLIPRTKAK* # PASA_UPDATE: g4404.t1, single gene model update, valid-1, status:[pasa:asmbl_1970,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 1778 5929 . + . ID=g4404;Name=g4404.t1 NODE_155_length_34230_cov_48.062 . mRNA 1778 5929 . + . ID=g4404.t1;Parent=g4404;Name=g4404.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 1778 2149 . + . ID=g4404.t1.utr5p1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 1778 2764 . + . ID=g4404.t1.exon1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 2150 2764 . + 0 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 2898 3232 . + . ID=g4404.t1.exon2;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 2898 3232 . + 0 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 3548 3606 . + . ID=g4404.t1.exon3;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 3548 3606 . + 1 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 3804 3933 . + . ID=g4404.t1.exon4;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 3804 3933 . + 2 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 4177 4331 . + . ID=g4404.t1.exon5;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 4177 4331 . + 1 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . exon 4621 5929 . + . ID=g4404.t1.exon6;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . CDS 4621 5774 . + 2 ID=cds.g4404.t1;Parent=g4404.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 5775 5929 . + . ID=g4404.t1.utr3p1;Parent=g4404.t1 #PROT g4404.t1 g4404 MGSGTQSSVDSALLRKVMDRYALHASTLPPPVEVNSGPSMRNSHGMVSLKGHLRKRKPTPAEIGADLLRSRPPPSVSAGITSMIAARTRGPKPAYSFEAAAAESILAAEILAKVRQHANLPPLAPPIIPDEEETTNAPGRPLPLVPELVKKPAQRLFPDFRPPATAIYVGLKPNERIGDYVLNRRIAQGSMSAIIEATHRLTDAKVALKIVRKRYSATDNTGACDASYDVGRFGQILLREAAVLRRLQAHPCVVKIYEVVETDEVVALALERIGTEYRRLTDRLLSDGPIEETVAKEIMRQLLSTLAFVHDQKILHKDVTTNNILVSDETDEIKLIDFGRAAQFTASRSLSEANANVSFATNDTLIGKKCVGPEIDLWGCGVCLHAMLVGKPPRTNEAVIGSHVHAFDANASHNAKPATGFHFELPPNASGDLKAFFHALLDPAFARKLRLKSIDDFLDHVWMVGNEEALVESSGPSILQRPSVSFDIRKTYVDDAQTEAASASTSSGTAATSGSQPVPAGDASSVVRTWHSDLYPQLNMHIAPESSVPTSSSALPAIDSAAKSTATLTLSPSVKGTAVPMPRKSVFSSIAEALEKPNIVRDARQSMQASGAVEQAWFTRQRSRDKVMSSRAKILQASFAAAAAASTAAAARKQMSQARLLPISSQGRHEGVVERQRREREVEEVRQVHRWVQGRMHDLGFSTTIVSKVAVSLEAITGNVIEDNDGDGEEPSISSTARRGRPELDSAAATYRLLFDSKLSEKRAALKRHNSILNFNTRLAAVKARRGLIAAGSHSHGSSSTRKEDQSPPQVLKLH* # PASA_UPDATE: g4408.t1, single gene model update, valid-1, status:[pasa:asmbl_1972,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 14636 15869 . + . ID=g4408;Name=g4408.t1 NODE_155_length_34230_cov_48.062 . mRNA 14636 15869 . + . ID=g4408.t1;Parent=g4408;Name=g4408.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 14636 14708 . + . ID=g4408.t1.utr5p1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . exon 14636 14852 . + . ID=g4408.t1.exon1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . CDS 14709 14852 . + 0 ID=cds.g4408.t1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . exon 14956 15076 . + . ID=g4408.t1.exon2;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . CDS 14956 15076 . + 0 ID=cds.g4408.t1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . exon 15180 15310 . + . ID=g4408.t1.exon3;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . CDS 15180 15310 . + 2 ID=cds.g4408.t1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . exon 15452 15501 . + . ID=g4408.t1.exon4;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . CDS 15452 15501 . + 0 ID=cds.g4408.t1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . exon 15622 15869 . + . ID=g4408.t1.exon5;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . CDS 15622 15643 . + 1 ID=cds.g4408.t1;Parent=g4408.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 15644 15869 . + . ID=g4408.t1.utr3p1;Parent=g4408.t1 #PROT g4408.t1 g4408 MASRIVRILCFGDSLTEGFTRGGMKMKPYSRVLKSLLDATAPAGWSFEVENKGRSGEAAIEEMERRLPNILQRRAASNERIDWVVILGGTNDIGSGSNSDEIIGALKNLHASSHNHGARTIALTIPETDYEEISHSHKLIRLDTNNMLREYALSS* # PASA_UPDATE: g4412.t1, single gene model update, valid-1, status:[pasa:asmbl_1975,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 24250 26488 . + . ID=g4412;Name=g4412.t1 NODE_155_length_34230_cov_48.062 . mRNA 24250 26488 . + . ID=g4412.t1;Parent=g4412;Name=g4412.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 24250 24385 . + . ID=g4412.t1.utr5p1;Parent=g4412.t1 NODE_155_length_34230_cov_48.062 . exon 24250 24737 . + . ID=g4412.t1.exon1;Parent=g4412.t1 NODE_155_length_34230_cov_48.062 . CDS 24386 24737 . + 0 ID=cds.g4412.t1;Parent=g4412.t1 NODE_155_length_34230_cov_48.062 . exon 24921 26488 . + . ID=g4412.t1.exon2;Parent=g4412.t1 NODE_155_length_34230_cov_48.062 . CDS 24921 26152 . + 2 ID=cds.g4412.t1;Parent=g4412.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 26153 26488 . + . ID=g4412.t1.utr3p1;Parent=g4412.t1 #PROT g4412.t1 g4412 MARLSRACAALVLVVISAGLTVTHAAPFAADAIDVVSLSAMLESTGNGKPASLAATLTGHYDPCKSPIVLVPGLGGSVLDVMVTDEYEPPHSACRILFPKGNFTTGYNRLWPSLAAFDFLPYHVYRQCWLDAMATNYNATTKTFSNTKGVVVQPRDYGGIDGVSNLFALHGVWGPSMSAVYEDLVARLDGTGYVTHKNLRGVPYDFRLVADDDYIASEYARLKATIEEMVDTSAAECSDGVSRPAIVFMHSLGGLYFFRFLETVDAAWKDAYIRTAVSINTPWLGAPKSLRALISGDSQGLPGANADFIASERFMGGLLWAVPFHDETLPTEWIVPILQIGARKFTTSADDLRELFSLLGSPAAASIISNHLRHVVKPKAPGVEYYCAIGHGVITEAYYAYGSGVLSSSSDPTSYREVLRPAADWVASSIGASASVRMGNISDPFPIVGILNPVPQLVIPIKGDLASDPMQGDGTVPLMSLEHCTTFAEGNNGRTVEVHRFAGGDHLGLLSVKEFIEFAMNLVDKHQ* # PASA_UPDATE: g4413.t1, single gene model update, valid-1, status:[pasa:asmbl_1969,status:12], valid-1 NODE_155_length_34230_cov_48.062 . gene 28813 32316 . - . ID=g4413;Name=g4413.t1 NODE_155_length_34230_cov_48.062 . mRNA 28813 32316 . - . ID=g4413.t1;Parent=g4413;Name=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 32152 32316 . - . ID=g4413.t1.exon1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 32152 32316 . - 0 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 31889 31993 . - . ID=g4413.t1.exon2;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 31889 31993 . - 0 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 31541 31682 . - . ID=g4413.t1.exon3;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 31541 31682 . - 0 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 31196 31324 . - . ID=g4413.t1.exon4;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 31196 31324 . - 2 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 30854 30951 . - . ID=g4413.t1.exon5;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 30854 30951 . - 2 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . exon 28813 30618 . - . ID=g4413.t1.exon6;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . CDS 28960 30618 . - 0 ID=cds.g4413.t1;Parent=g4413.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 28813 28959 . - . ID=g4413.t1.utr3p1;Parent=g4413.t1 #PROT g4413.t1 g4413 MSGAKGLLGSIIRKQSTPNAAHAPVKVSEEDAPQVESEYNIRKITELQSRFAGGETLLVPGRVFVREGTLLKQCRKNLKQRHFVLFNDILIYGTILARGHYAKQVVLPLSEVSFTGECHFLPSVYDGEPSALHGGEFDAANAFQINHKSKSFHVVAQNATDKANWLANLQKYILLAADGEGRMNQVAAVWVPDTAVGLCMVCKAAKFGPFNRKHHCRNCGKVVCHPCSTTTKVLAHISSKPQRICDDCVAVFSADGGGRGQQRPSLIPLGTVVSPASMTQKAPEAPSSAAPIAVQTNVSAAAPTTAPPAAAKNEEGHSEGDLTTDSDDDSDDGGLDEPAAPTPATPAATVPAPTEVHAGPQSTEAAPADAITAPKEVAAEITTPSATQDVSYAVPERNAVQPTKPPVQGPIAAMAALMAQAAAKSAGTAPPATPSAQPDASTQPTHPAPTPIPAPRPAPPPVPVSVPAVETLSPTPAPAPAPTPTPAPAPAPAPTPTPAPVPAPTPTSSVAPVAAAAVTTPSVGSPVAPPRKKKGAADAATPSDAPPVAAVTPVDPPAAPVPVVAASPSEDVATPSAPEHPSPVPEMIEVKPAAVSPHVSTEDRSNTFCERDSVPESSSCLPSGESIFGLASPSSSLAAAPTPTPAPTPAPEPESAPVEPVEPPTKEEAEHTPQVVRAPSLTEEAAAAISTVGGNGETGVSASTSSVAEPTSVADAADAKGEEGDEAGDSVTASPAAGGAKRGPKRHKFKKRESTVEGAAPGASA* # ORIGINAL: g4403.t1 original gene structure, not modified by PASA NODE_155_length_34230_cov_48.062 AUGUSTUS gene 176 1136 . - . ID=g4403;Name=g4403.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS mRNA 176 1136 . - . ID=g4403.t1;Parent=g4403;Name=g4403.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 492 1136 . - . ID=g4403.t1.exon1;Parent=g4403.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 492 1136 . - 0 ID=cds.g4403.t1;Parent=g4403.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 176 294 . - . ID=g4403.t1.exon2;Parent=g4403.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 176 294 . - 0 ID=cds.g4403.t1;Parent=g4403.t1 #PROT g4403.t1 g4403 MAGGGGRSFFLLAGGIFLLFGFNFYLTYYVRELEVEHAAETLQMARKFESQLRHQADAMREVVANSEQKLRLMESYVGTVEEKLRDHVIEHRTTGPNAEPLKKQDPRKKIVDFNAKFATDIKEFIIASRRPDFLEGLSFCPSGKWSGNEWQPIESCEIKYHLDEQCTSKVRWVVVAGDSNFRQIHLALANKFTLYLGSHPEESPFSDRERFNTNGMRFSFRFTPYIQLSNGTLAYVNVNNLLDSPEDAYPDVAD # PASA_UPDATE: g4405.t1, single gene model update, valid-1, status:[pasa:asmbl_1971,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 6467 9133 . + . ID=g4405;Name=g4405.t1 NODE_155_length_34230_cov_48.062 . mRNA 6467 9133 . + . ID=g4405.t1;Parent=g4405;Name=g4405.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 6467 6922 . + . ID=g4405.t1.utr5p1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . exon 6467 6998 . + . ID=g4405.t1.exon1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . CDS 6923 6998 . + 0 ID=cds.g4405.t1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . exon 7192 7410 . + . ID=g4405.t1.exon2;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . CDS 7192 7410 . + 2 ID=cds.g4405.t1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . exon 7584 7702 . + . ID=g4405.t1.exon3;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . CDS 7584 7702 . + 2 ID=cds.g4405.t1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . exon 8303 8422 . + . ID=g4405.t1.exon4;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . CDS 8303 8422 . + 0 ID=cds.g4405.t1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . exon 8767 9133 . + . ID=g4405.t1.exon5;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . CDS 8767 8904 . + 0 ID=cds.g4405.t1;Parent=g4405.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 8905 9133 . + . ID=g4405.t1.utr3p1;Parent=g4405.t1 #PROT g4405.t1 g4405 MGCRPSFPLKDDTICFYEPHLFSSTGSLLPVESAQSSLPATHKLKTHRVSCWEDADDGTGPPQKTVKYVNSYDAQQTRLWNRLQSERERVNTQRKNIEEMDFSKLRQKFPQWTEGELANLHMQFQMFDLNGDNTIDFDELNYMLDELNDETSHEERYKHFCSVDTDGSGCVEFEEFLQLVAQVQEGTADNSTGFGALYAMASERINRLQGRMTVNHQIQVGLF* # PASA_UPDATE: g4414.t1, single gene model update, valid-1, status:[pasa:asmbl_1976,status:3], valid-1 NODE_155_length_34230_cov_48.062 . gene 32755 33564 . + . ID=g4414;Name=g4414.t1 NODE_155_length_34230_cov_48.062 . mRNA 32755 33564 . + . ID=g4414.t1;Parent=g4414;Name=g4414.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 32755 32843 . + . ID=g4414.t1.utr5p1;Parent=g4414.t1 NODE_155_length_34230_cov_48.062 . exon 32755 33171 . + . ID=g4414.t1.exon1;Parent=g4414.t1 NODE_155_length_34230_cov_48.062 . CDS 32844 33171 . + 0 ID=cds.g4414.t1;Parent=g4414.t1 NODE_155_length_34230_cov_48.062 . exon 33282 33564 . + . ID=g4414.t1.exon2;Parent=g4414.t1 NODE_155_length_34230_cov_48.062 . CDS 33282 33526 . + 2 ID=cds.g4414.t1;Parent=g4414.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 33527 33564 . + . ID=g4414.t1.utr3p1;Parent=g4414.t1 #PROT g4414.t1 g4414 MPLVKFQVPLADGKHDVTLFHGTTTGRRIICVDGKEVLRRNYMFSLVGSERVSVGKHKVGISIDSTEDFSYDYTLSVDGKALKRHKEQVRESTATWTFSFRKEKHMITIEKTSLDVFLDGEQIETVSEFIDEGTEQHFRIDGEPCSILIRRTLRRKALGAQKEEVAFTLVVGGKEIDENTSSRFEQDDDD* # ORIGINAL: g4406.t1 original gene structure, not modified by PASA NODE_155_length_34230_cov_48.062 AUGUSTUS gene 11010 11420 . + . ID=g4406;Name=g4406.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS mRNA 11010 11420 . + . ID=g4406.t1;Parent=g4406;Name=g4406.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 11010 11420 . + . ID=g4406.t1.exon1;Parent=g4406.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 11010 11420 . + 0 ID=cds.g4406.t1;Parent=g4406.t1 #PROT g4406.t1 g4406 MPPFGQDQPLSLHRDTLRDVSLADTFRVVNSDLLFDVRKHHAIKRLRSPSKEDATPTQADVSASPQAFLASPRSSSVQCSPFMSSLSRMPHYPMSSLGLLSDDDYADADEVDAMETSALVFVLFVLSVILYMRFYM* # ORIGINAL: g4409.t1 original gene structure, not modified by PASA NODE_155_length_34230_cov_48.062 AUGUSTUS gene 16359 17570 . + . ID=g4409;Name=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS mRNA 16359 17570 . + . ID=g4409.t1;Parent=g4409;Name=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 16359 16365 . + . ID=g4409.t1.exon1;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 16359 16365 . + 0 ID=cds.g4409.t1;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 16530 16603 . + . ID=g4409.t1.exon2;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 16530 16603 . + 2 ID=cds.g4409.t1;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 16925 17223 . + . ID=g4409.t1.exon3;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 16925 17223 . + 0 ID=cds.g4409.t1;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS exon 17513 17570 . + . ID=g4409.t1.exon4;Parent=g4409.t1 NODE_155_length_34230_cov_48.062 AUGUSTUS CDS 17513 17570 . + 1 ID=cds.g4409.t1;Parent=g4409.t1 #PROT g4409.t1 g4409 MTGLEEHDTLLEMACIITDGNLNIIAEAPDLIIHQSDDVLHRMGEWCTKHHGESGLTAASRESKLSVSEAEDLMVAFVRQHTIAKQSPLAGNSVHCDKTFLVRYMPKFVDHLHYRIVDVSTVKELCRRWYPEQFEKAPAKKVSHR* # PASA_UPDATE: g4411.t1, single gene model update, valid-1, status:[pasa:asmbl_1973,status:3], valid-1 # PASA_UPDATE: g4411.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1968,status:12],[pasa:asmbl_1974,status:12], valid-1 NODE_155_length_34230_cov_48.062 . gene 20998 23816 . + . ID=g4411;Name=g4411.t1 NODE_155_length_34230_cov_48.062 . mRNA 20998 23816 . + . ID=g4411.t1;Parent=g4411;Name=g4411.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 20998 21158 . + . ID=g4411.t1.utr5p1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 20998 21244 . + . ID=g4411.t1.exon1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 21159 21244 . + 0 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 21351 21369 . + . ID=g4411.t1.exon2;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 21351 21369 . + 1 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 21496 21622 . + . ID=g4411.t1.exon3;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 21496 21622 . + 0 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 21821 21947 . + . ID=g4411.t1.exon4;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 21821 21947 . + 2 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 22184 22313 . + . ID=g4411.t1.exon5;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 22184 22313 . + 1 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 23379 23504 . + . ID=g4411.t1.exon6;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 23379 23504 . + 0 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . exon 23769 23816 . + . ID=g4411.t1.exon7;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . CDS 23769 23801 . + 0 ID=cds.g4411.t1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . three_prime_UTR 23802 23816 . + . ID=g4411.t1.utr3p1;Parent=g4411.t1 NODE_155_length_34230_cov_48.062 . mRNA 20998 23777 . + . ID=g4411.t1.1.5b6be70a;Parent=g4411;Name=g4411.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 20998 21158 . + . ID=g4411.t1.1.5b6be70a.utr5p1;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 20998 21244 . + . ID=g4411.t1.1.5b6be70a.exon1;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 21159 21244 . + 0 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 21351 21369 . + . ID=g4411.t1.1.5b6be70a.exon2;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 21351 21369 . + 1 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 21496 21622 . + . ID=g4411.t1.1.5b6be70a.exon3;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 21496 21622 . + 0 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 21821 21947 . + . ID=g4411.t1.1.5b6be70a.exon4;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 21821 21947 . + 2 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 22184 22313 . + . ID=g4411.t1.1.5b6be70a.exon5;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 22184 22313 . + 1 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . exon 23379 23777 . + . ID=g4411.t1.1.5b6be70a.exon6;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . CDS 23379 23534 . + 0 ID=cds.g4411.t1.1.5b6be70a;Parent=g4411.t1.1.5b6be70a NODE_155_length_34230_cov_48.062 . three_prime_UTR 23535 23777 . + . ID=g4411.t1.1.5b6be70a.utr3p1;Parent=g4411.t1.1.5b6be70a #PROT g4411.t1 g4411 MSACGTFRFQVGGHTLLLNEDASNTVSTGTKVWSCSITLSHFLLKNKSKYGPLLRGKRLVELGAGCGLAGLVCALAFGSHTVLTDMAELVYLLERNARLNSATIADSGSGGTVAVQALKWEDSLDGIERPIDVIVGCDVVFKLESIAPLVETIRGLCDSSKTLILLSLEARDPPVHAEFIACVERHFVVRSLPQGKMDASDRDGEVYLYSLKMKR* #PROT g4411.t1.1.5b6be70a g4411 MSACGTFRFQVGGHTLLLNEDASNTVSTGTKVWSCSITLSHFLLKNKSKYGPLLRGKRLVELGAGCGLAGLVCALAFGSHTVLTDMAELVYLLERNARLNSATIADSGSGGTVAVQALKWEDSLDGIERPIDVIVGCDVVFKLESIAPLVETIRGLCDSSKTLILLSLEARDPPVHAEFIACVERHFVVRSLPQGKMDASDRDGEVGDPLEFVA* # PASA_UPDATE: g4407.t1, single gene model update, valid-1, status:[pasa:asmbl_1977,status:12], valid-1 NODE_155_length_34230_cov_48.062 . gene 12073 14149 . - . ID=g4407;Name=g4407.t1 NODE_155_length_34230_cov_48.062 . mRNA 12073 14149 . - . ID=g4407.t1;Parent=g4407;Name=g4407.t1 NODE_155_length_34230_cov_48.062 . five_prime_UTR 14067 14149 . - . ID=g4407.t1.utr5p1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 13953 14149 . - . ID=g4407.t1.exon1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 13953 14066 . - 0 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 13769 13848 . - . ID=g4407.t1.exon2;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 13769 13848 . - 0 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 13556 13675 . - . ID=g4407.t1.exon3;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 13556 13675 . - 1 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 13321 13442 . - . ID=g4407.t1.exon4;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 13321 13442 . - 1 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 13186 13225 . - . ID=g4407.t1.exon5;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 13186 13225 . - 2 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 12904 13071 . - . ID=g4407.t1.exon6;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 12904 13071 . - 1 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 12535 12661 . - . ID=g4407.t1.exon7;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 12535 12661 . - 1 ID=cds.g4407.t1;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . exon 12073 12258 . - . ID=g4407.t1.exon8;Parent=g4407.t1 NODE_155_length_34230_cov_48.062 . CDS 12073 12258 . - 0 ID=cds.g4407.t1;Parent=g4407.t1 #PROT g4407.t1 g4407 MVAKDGTYFAKSALGGGLAAMASHVIVVPLDVVKTRMQISPAQYRSLAQTTSKIAAEEGLGGLLLGLGPTFYGYTIQGLFKYGCYEIFKDRFTNALGEENAMKFRTPMYLASGICAEMIADIALAPAEAVRIRIVSQPKYASGFFSGLSKMASQEGISGLYRGLIPLMLKQVPYTAVKFAVFEASLEVIYGAHPKPREQMTRSDELQISFAAGIIGGVASAIASHPADTILSKVNSTKYDGSMFSAISQATRDLGAKGLWAGLATRCGMVGTLAALQLFLYDAAKVSLGLPVSIGIGVKSKAAASATTVPELSAGPKH* # ORIGINAL: g14091.t1 original gene structure, not modified by PASA NODE_1856_length_8885_cov_38.8581 AUGUSTUS gene 3038 4746 . - . ID=g14091;Name=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS mRNA 3038 4746 . - . ID=g14091.t1;Parent=g14091;Name=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 4506 4746 . - . ID=g14091.t1.exon1;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 4506 4746 . - 0 ID=cds.g14091.t1;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 4140 4300 . - . ID=g14091.t1.exon2;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 4140 4300 . - 2 ID=cds.g14091.t1;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 3598 3818 . - . ID=g14091.t1.exon3;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 3598 3818 . - 0 ID=cds.g14091.t1;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 3038 3398 . - . ID=g14091.t1.exon4;Parent=g14091.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 3038 3398 . - 1 ID=cds.g14091.t1;Parent=g14091.t1 #PROT g14091.t1 g14091 MQVNPISHIVRIDASTRAAYTDLDEMPTDEDDEILAGGAAGPRGDYGRIRQRRVTTRLDFPAFQLDPCDGNGCVAMVFTKGPQSSPEIWFCDRSSMWYYMSPSFTDYFRLMVAHIGLPGWQYAFTPAGLSPQSKQWFYLYAPLRLAAHQQKSAREAKELTLGDIAAEAARGGDEGDDDFAPSRFDFDKVNKILQENRWGVFALGVLVSERRRSKTVQSMRRPQTRAGTSSEGERSLLGSARPQRPPRDPSSGYGAQSSASASTNRTGIVRPQSARAPANASGIAANAAAVATVVTTTPLNRSGSAGALNGSTSGSAARPGSSSVRRI* # ORIGINAL: g14092.t1 original gene structure, not modified by PASA NODE_1856_length_8885_cov_38.8581 AUGUSTUS gene 4845 5937 . - . ID=g14092;Name=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS mRNA 4845 5937 . - . ID=g14092.t1;Parent=g14092;Name=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 5796 5937 . - . ID=g14092.t1.exon1;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 5796 5937 . - 0 ID=cds.g14092.t1;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 5528 5607 . - . ID=g14092.t1.exon2;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 5528 5607 . - 2 ID=cds.g14092.t1;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 5133 5220 . - . ID=g14092.t1.exon3;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 5133 5220 . - 0 ID=cds.g14092.t1;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 4845 4939 . - . ID=g14092.t1.exon4;Parent=g14092.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 4845 4939 . - 2 ID=cds.g14092.t1;Parent=g14092.t1 #PROT g14092.t1 g14092 MPFSSGGASSMSASDVSKVAADDFADEKRAQIRDLFDKMCLGIIQSLERRVGVMDVKLIDRRPVPRYSINAWEQDNHCMLPDDFKNFLLTSDGMLLRWNVMFRGVQSLALEVQHWRNFHFLWDAGDVTFRDQSV* # PASA_UPDATE: g14093.t1, single gene model update, valid-1, status:[pasa:asmbl_2822,status:12], valid-1 NODE_1856_length_8885_cov_38.8581 . gene 6945 8773 . + . ID=g14093;Name=g14093.t1 NODE_1856_length_8885_cov_38.8581 . mRNA 6945 8773 . + . ID=g14093.t1;Parent=g14093;Name=g14093.t1 NODE_1856_length_8885_cov_38.8581 . five_prime_UTR 6945 7044 . + . ID=g14093.t1.utr5p1;Parent=g14093.t1 NODE_1856_length_8885_cov_38.8581 . exon 6945 8166 . + . ID=g14093.t1.exon1;Parent=g14093.t1 NODE_1856_length_8885_cov_38.8581 . CDS 7045 8166 . + 0 ID=cds.g14093.t1;Parent=g14093.t1 NODE_1856_length_8885_cov_38.8581 . exon 8273 8773 . + . ID=g14093.t1.exon2;Parent=g14093.t1 NODE_1856_length_8885_cov_38.8581 . CDS 8273 8773 . + 0 ID=cds.g14093.t1;Parent=g14093.t1;3_prime_partial=true #PROT g14093.t1 g14093 MTDDKNGGGDQDDKRKMRKSRVLKEVDIPQDFVGKWVHRLFKFYIRPVSTKWVRWEMLMVCFITITCILDPYKVAFDFTGVGGWAVLYLLDFFFLVDMFLQFHMAFMQEGFLETDSREMAVNYLRTHFTIDTLSVFPIEFIAFAFPGYELRVLAICRLNRLLRVYRLVAYFNRKENELNANTSLVRVVKFIVYVVVLTHWIACLFYVSGCHSGRSLTCESGSWATQLLRSNRTGVHLDDSSTATRYILTLYWAVTTTTTTGYGDVVPFTNGEKVYALLVMLVGSILYGFISGSITSTMANADSQRVRYFTRLQAVTRYMRDQSLANDLHQRVSEYFEYLWLRNRGKDHKTLFVDMPLTFQAEVALSINKDIIDRVPLFQNTDVGFQRMLSLVIKPFLYLPREFIVNKGDIGREMFFIHRGRVEVVSEDGQTIYATMESGSFFGEISLIFSVPRTASIRAATHCDLFVLTKRDLDSVLHHYPEISKQIQAIAKARFESAERRAEETKDESAVEIPAEAEAEPEVAGVGAGVISSIRRKISRK # ORIGINAL: g14089.t1 original gene structure, not modified by PASA NODE_1856_length_8885_cov_38.8581 AUGUSTUS gene 338 476 . + . ID=g14089;Name=g14089.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS mRNA 338 476 . + . ID=g14089.t1;Parent=g14089;Name=g14089.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS exon 338 476 . + . ID=g14089.t1.exon1;Parent=g14089.t1 NODE_1856_length_8885_cov_38.8581 AUGUSTUS CDS 338 476 . + 1 ID=cds.g14089.t1;Parent=g14089.t1 #PROT g14089.t1 g14089 VVWRSFVGNRNAWTDTPSLHFERRGGRGNHQGSQDAAARRVPGWSV # PASA_UPDATE: g14090.t1, single gene model update, valid-1, status:[pasa:asmbl_2821,status:12], valid-1 NODE_1856_length_8885_cov_38.8581 . gene 858 2294 . + . ID=g14090;Name=g14090.t1 NODE_1856_length_8885_cov_38.8581 . mRNA 858 2294 . + . ID=g14090.t1;Parent=g14090;Name=g14090.t1 NODE_1856_length_8885_cov_38.8581 . exon 858 2294 . + . ID=g14090.t1.exon1;Parent=g14090.t1 NODE_1856_length_8885_cov_38.8581 . CDS 858 2093 . + 0 ID=cds.g14090.t1;Parent=g14090.t1 NODE_1856_length_8885_cov_38.8581 . three_prime_UTR 2094 2294 . + . ID=g14090.t1.utr3p1;Parent=g14090.t1 #PROT g14090.t1 g14090 MNARFRPSFSEIKLSLTTTYDGLKAHDAAERQAMTDDEPGGSYIDLGDIHHPKTPSRNRKAWDAVDGGSPGSRLALPAVNEEGDRAMVRTSSNTSIRSRSAGDVMDSQAAFLPFRDGDTSAASHWNVPRVSVPMCESNNPYGANPSLDWTRKSSMMVKSMSMPALNKSRDSMGKPLFELLPEKHSHMARSFRDNIGAVQAGHSDGDVHEKGNGMGLLVANFAIGAASAIRSAVGWDDAKRPASSEAIDHAGHGTGIEMREIARLSPSTTQRHADAAHADAADGSPLSSRRTSSWTLVDMPPFGSHNDVVNENGGSADRESSIGQVIVASLDAHPYSMTTVDNGDSAVEELTVIAMATPRESECEEQQQLKNGNTIAVIAVPASGHEVAMGDVGITSAKEWVCGSPLSASEA* # PASA_UPDATE: g11248.t1, single gene model update, valid-1, status:[pasa:asmbl_6847,status:12],[pasa:asmbl_6848,status:12], valid-1 NODE_4006_length_2365_cov_22.1127 . gene 1 2249 . - . ID=g11248;Name=g11248.t1 NODE_4006_length_2365_cov_22.1127 . mRNA 1 2249 . - . ID=g11248.t1;Parent=g11248;Name=g11248.t1 NODE_4006_length_2365_cov_22.1127 . exon 532 2249 . - . ID=g11248.t1.exon1;Parent=g11248.t1 NODE_4006_length_2365_cov_22.1127 . CDS 532 2249 . - 0 ID=cds.g11248.t1;Parent=g11248.t1 NODE_4006_length_2365_cov_22.1127 . exon 204 365 . - . ID=g11248.t1.exon2;Parent=g11248.t1 NODE_4006_length_2365_cov_22.1127 . CDS 204 365 . - 1 ID=cds.g11248.t1;Parent=g11248.t1 NODE_4006_length_2365_cov_22.1127 . exon 1 51 . - . ID=g11248.t1.exon3;Parent=g11248.t1 NODE_4006_length_2365_cov_22.1127 . CDS 1 51 . - 1 ID=cds.g11248.t1;Parent=g11248.t1;3_prime_partial=true #PROT g11248.t1 g11248 MHTDTQLDVSPTQQRPHELTSTLAPQLQPQEQQQMHKDARHDVSSIQQRPHELTSTLEPQLPTQEQQQMHKDARHDVSPIQQRPHDQLTSTLPPQLPLQDQPQMHSDALLDVSPTQQRPHDQLTSALAPQLPPQDQLQMHSDARHDVSPTQQRPHDQLNSTLSSPLPPQDQQQMHTDTQHDVSLTQQGRHDQLTPTQALQLLLQVQQQMRSSARHDVSPTQQQPHDQLTSTLAPQLLPQEQPQMHTDARLDVSPTQQLPHDQLISTLAPQLSPQDRPQMHTDARDDVSPIQQHPHYQQENPMPGSNSVSVVGDAAGNTKDKPSIDGTVDVAHAGDDDKTENGRADMVGIAPREEGDCAMLPSTNNAASVFRTDETDVDAEIISPEKERLRHPPTPGCNYSTIVDVNDGNADVNDGNADVNDDHVGVDANDDNADVDANDDNADVDGNDVNADVDVTDDNADVDVTDDNADVDVNDVNADVDVNDGNADVNDDNADVNDDHVDMNDDHVDMNDGNADVDVNDVKADVDVNDVNADVDVNKDIVDVNDSVDNNDSISACNDDNATLTKPSLTHLRKIIRLARTSIPCLRINRRKQQPNLNIICAKEVMKFDKTKCLYPGCQRKGVPFRSFMSLRQHWISHLQDRD # ORIGINAL: g11417.t1 original gene structure, not modified by PASA NODE_1982_length_8202_cov_42.4898 AUGUSTUS gene 190 3448 . - . ID=g11417;Name=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS mRNA 190 3448 . - . ID=g11417.t1;Parent=g11417;Name=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 3148 3448 . - . ID=g11417.t1.exon1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 3148 3448 . - 0 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 2933 3020 . - . ID=g11417.t1.exon2;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 2933 3020 . - 2 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 2406 2703 . - . ID=g11417.t1.exon3;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 2406 2703 . - 1 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 2029 2203 . - . ID=g11417.t1.exon4;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 2029 2203 . - 0 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 1840 1863 . - . ID=g11417.t1.exon5;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 1840 1863 . - 2 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 1609 1682 . - . ID=g11417.t1.exon6;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 1609 1682 . - 2 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 1015 1260 . - . ID=g11417.t1.exon7;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 1015 1260 . - 0 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 519 659 . - . ID=g11417.t1.exon8;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 519 659 . - 0 ID=cds.g11417.t1;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 190 330 . - . ID=g11417.t1.exon9;Parent=g11417.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 190 330 . - 0 ID=cds.g11417.t1;Parent=g11417.t1 #PROT g11417.t1 g11417 MATTVVHQSVHAHAHPHAHVPPPSTGEHTLTTDIIEEEFADGQRVADGVEGGDGLIGSARRRSKSPQAVPFPPFYLEIYNYIAVVLSWASWLPIAILLSADRRVRRMIVFTTILRIVFNLLCFGFVRLLRYIGNYGARLEHANNATSYVKWLAHADDIDHYSGKDPWRDDAKTGEYDHALLARTLDSLRESRGKRNCREVGFLLQTVLHRHFCGLDDPRLHMVGIADGRVARAGTKHIIEDFVEEVGLCIKYFSEHECLDHSPHEKAALLERIANSQGRTALMLSGGGTLAMYHLGVVKALLETDLMPRIISGTSGGSIVAAMMALKTDKELLEDVIKPDIATRYGHEWFRPLSAQIRHFMKNGVLVNAADFNATTRAYYGEWTFKEAYERTGRIVNIAVTKSDAASHPVILNCLNTPDVLLWSAVTASCAIPGLMVPATLYAKDKHGKTVPAYPGGVKWMDGSITADIPMNVVRRQFNVNQFIVSQVNPIALAS* # ORIGINAL: g11418.t1 original gene structure, not modified by PASA NODE_1982_length_8202_cov_42.4898 AUGUSTUS gene 4364 8202 . + . ID=g11418;Name=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS mRNA 4364 8202 . + . ID=g11418.t1;Parent=g11418;Name=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 4364 4379 . + . ID=g11418.t1.exon1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 4364 4379 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 4548 4693 . + . ID=g11418.t1.exon2;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 4548 4693 . + 2 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 4848 4883 . + . ID=g11418.t1.exon3;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 4848 4883 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 5066 5164 . + . ID=g11418.t1.exon4;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 5066 5164 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 5340 5446 . + . ID=g11418.t1.exon5;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 5340 5446 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 5626 5974 . + . ID=g11418.t1.exon6;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 5626 5974 . + 1 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 6134 6191 . + . ID=g11418.t1.exon7;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 6134 6191 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 6322 6436 . + . ID=g11418.t1.exon8;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 6322 6436 . + 2 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 6624 6706 . + . ID=g11418.t1.exon9;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 6624 6706 . + 1 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 6886 6917 . + . ID=g11418.t1.exon10;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 6886 6917 . + 2 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 7102 7254 . + . ID=g11418.t1.exon11;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 7102 7254 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 7360 7479 . + . ID=g11418.t1.exon12;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 7360 7479 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 7704 7821 . + . ID=g11418.t1.exon13;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 7704 7821 . + 0 ID=cds.g11418.t1;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS exon 8021 8202 . + . ID=g11418.t1.exon14;Parent=g11418.t1 NODE_1982_length_8202_cov_42.4898 AUGUSTUS CDS 8021 8202 . + 2 ID=cds.g11418.t1;Parent=g11418.t1 #PROT g11418.t1 g11418 MPEVSVNVKWSKTVFENVSLNTDEPAALFKAQLFALSNVPPERQKIMVKGGMLKDDTDWKKLDIKPGHTFMMMGTAELPAEQSAQTTTFAEDMEIDKPQEETFTAGLENLGNTCYMNATVQCLRVVPELQSALAAYKGSVTQDPSNNVTVGMRDLLSLLTKSAGSTDGVPPIIFLQACVFVLLEAIVCNEKWVVAFSVLWLTLNILTWFLYFARHKHGMKRAQLLRNAFPQFAQEGPHGPMQQDANECWSQVVRSLAQRLPAVDAAGNLTASSTMATLTETAQASIGEDGQLRPKSLVEQYFAGVFRSTMKCEESADEPQKLSFEPFLQLTCHISQDVNYMAQGIKEAMEETITKRSESLGRDAKYRKSQKIDRLPGYLSVNFVRFFWKGKVNAKILRNVKFSATLDLFDLCTPELQDRLKPMREKFKVYEDSLISKKVADPASAGKGKDKEREVPYYYNPQAAADLAKFPPFSFENDRGSNNSGLYELSSVLTHMGRSSDSGHYVGWVRTKGGGLAYSHVWATWDEALVVAGRGSKT # ORIGINAL: g1210.t1 original gene structure, not modified by PASA NODE_2985_length_4602_cov_23.6664 AUGUSTUS gene 738 2292 . + . ID=g1210;Name=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS mRNA 738 2292 . + . ID=g1210.t1;Parent=g1210;Name=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 738 870 . + . ID=g1210.t1.exon1;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 738 870 . + 0 ID=cds.g1210.t1;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 1000 1302 . + . ID=g1210.t1.exon2;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 1000 1302 . + 2 ID=cds.g1210.t1;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 1413 1834 . + . ID=g1210.t1.exon3;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 1413 1834 . + 2 ID=cds.g1210.t1;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 2002 2292 . + . ID=g1210.t1.exon4;Parent=g1210.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 2002 2292 . + 0 ID=cds.g1210.t1;Parent=g1210.t1 #PROT g1210.t1 g1210 MQVLTPINVLPVTHEQPPSQSNSTKGPRAGRKRGAANFQKDEVWVLLRAVDQVKPTCPIQWQKVADLFNKAAVARERPLRDASSLRKKFTSIRYEKPTTGNTEMSKECLFAKKLIEVLDKTAHGLDLDDIVSLQDLECLPSPMAANESDADAELELGSMLGDGATTGKGKAPMHMADAASGVSGDEDTPVPNEIDGDAQLPGEVSDSQLEDQLLGTFEAVPSTAGREKRFIFINSCGCPNALFLVMIWHGYRLNFGLVVSGLHLRVPIVLLHSQRNVAASIQRMEKTFQNNAVLRQKEGELDRSFNEQVASERNAIMQEHLAQQRQVIAQQQLGAQRIEEMLAAVLKQQESSAERDQAMLTAVLQQQTLLAELIKSLRAPSQ* # ORIGINAL: g1211.t1 original gene structure, not modified by PASA NODE_2985_length_4602_cov_23.6664 AUGUSTUS gene 2370 3802 . - . ID=g1211;Name=g1211.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS mRNA 2370 3802 . - . ID=g1211.t1;Parent=g1211;Name=g1211.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 2804 3802 . - . ID=g1211.t1.exon1;Parent=g1211.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 2804 3802 . - 0 ID=cds.g1211.t1;Parent=g1211.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS exon 2370 2696 . - . ID=g1211.t1.exon2;Parent=g1211.t1 NODE_2985_length_4602_cov_23.6664 AUGUSTUS CDS 2370 2696 . - 0 ID=cds.g1211.t1;Parent=g1211.t1 #PROT g1211.t1 g1211 MEPELADMLWGDLGDSETWRRKRQRAWDEAEVDGEAFAASAAMCASLLSIRDRKALQRSEIPLPKESVWAKLYAQRRSNGFAKVIRLDVDTFDQLLSVFQPRFDALYIDDHMAGPRRSRRGRPRLLDAAAGLGLVLFWLSSPAREFHVGLLFGLSETRCSVYVRRGLRLLLDTLREFPAARITWPSEAEMMEWAGLVNRRQNLIRGCFGFVDGLHIKVPSLANTELQNMYYNPFSRECTVKCVFAFAPTGVVFFARINFPGSWHDSAAGRPLYEKLESQTPDGYCVVGDSAFAASDKLLTPRSTGIPSKTVEREATENAAPQQVAKTRAQREQRNPSFQPGIGDALLCRAILSIRQCAEWGNRTVTGAFPRLQIGLPGDDRVFWGEIQEAIVRLVNVRARIMAPCFGGNQLRTVYNEDYELYALTGERFSEHFSRLYLQIQ* # ORIGINAL: g3206.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 26656 27973 . + . ID=g3206;Name=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 26656 27973 . + . ID=g3206.t1;Parent=g3206;Name=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 26656 26875 . + . ID=g3206.t1.exon1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 26656 26875 . + 0 ID=cds.g3206.t1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 27114 27211 . + . ID=g3206.t1.exon2;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 27114 27211 . + 2 ID=cds.g3206.t1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 27301 27374 . + . ID=g3206.t1.exon3;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 27301 27374 . + 0 ID=cds.g3206.t1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 27473 27572 . + . ID=g3206.t1.exon4;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 27473 27572 . + 1 ID=cds.g3206.t1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 27687 27735 . + . ID=g3206.t1.exon5;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 27687 27735 . + 0 ID=cds.g3206.t1;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 27927 27973 . + . ID=g3206.t1.exon6;Parent=g3206.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 27927 27973 . + 2 ID=cds.g3206.t1;Parent=g3206.t1 #PROT g3206.t1 g3206 MALRSAIFSTGLSCVARRVAQATPAIPATRAFLQPATLGARRLFATDRGLVEHDGRSSGLGEHRPENLSTGQKGIFLYSVFSELFSGTSINTLYGKALDEVCEDQRIKDLVGEPIKGFGETTRRGRRRHISSQEYVVDNVNYIRAKFYISGSKSRGTVFMELKEETPGEYVYRYLFVESPGDGLPSKRVILQDNR* # ORIGINAL: g3208.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 29793 30575 . - . ID=g3208;Name=g3208.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 29793 30575 . - . ID=g3208.t1;Parent=g3208;Name=g3208.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 29793 30575 . - . ID=g3208.t1.exon1;Parent=g3208.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 29793 30575 . - 0 ID=cds.g3208.t1;Parent=g3208.t1 #PROT g3208.t1 g3208 MPLVTIPFGDLAQILFDDAYGVDPRYAHEYSKTAPARKQKSQTRNCPSGEPCANTTKCERKGGCARTSAPALVPSEHAWAPRTDILESESEYTVVVELPGVGRSNINVSFENNVLSVNGRSAGSLSALPTTASASLVAEDTQRDIQKGSSVESASTNGDWENVAEKETDDVKVPAEEKLESTATPPVANEDSAAVNLEAPAPVAHKWHKHERARGPFHRAFEFPDGIDASKLAAKYEDGVLVVSLPKQSRSKTAFTIKIA* # ORIGINAL: g3203.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 18806 21118 . + . ID=g3203;Name=g3203.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 18806 21118 . + . ID=g3203.t1;Parent=g3203;Name=g3203.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 18806 21118 . + . ID=g3203.t1.exon1;Parent=g3203.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 18806 21118 . + 0 ID=cds.g3203.t1;Parent=g3203.t1 #PROT g3203.t1 g3203 MATADEVKAFLNVNAFVKSGGTAISSASLERKAGALSATLVVACAGLTVDSPLVKANKKRTRDLLHASEYAYFFAAEIEDDAAARALRESLIADSVWLAVGNRISSSSDTNDKTIEHLMGTLRLVYCPAYCSVVAKDALAMMDGLRTRLVASVKRSSIKYRGDLDMQHQKINPQVTSYHGMDVNVRAVMAVFGVKEGLSMLDAIGKEVLRLCLCGALYDIVDLKSSTAVSRMRDYIVNVGRFITHDDLWPSLRHELPSGTEDAVDEEGFAFPASVLAGLIALSHAVAKEIDLETARVYLTIVGRFLSAHPEHPAIKMMRVQLEQILSDCKRLCGRDWDAVPGIKALRHDVIAFLGEIESETTIHKNVLTFDGRTTKLSPLLLLAVEVFSDDCSTLTYRTYAATLLWHSQQSSSANPECKRQLFRDYGQKVLYASLSFVAKLGEAEAIASSMHRCLAFMESAAGSLSFLVSQEFKRSSDAMTALIESTQRDGGTLGKVTYRALELGEFQAYCVVNSYGLKNGTAHAYHAMSTAADNGKRLAPVILRQMRLGITGAKKVEAGRKYPCVTLAHVVMAQIVEKHSALLARDLASAASDPLFPDTVVNMLIVLEELRRPTARQCDYYRIIPVRMTDADKAKCAECLETALLTLGLAADKLADGGQLTGAALCDFVPPQRPSAVAPAVSVDPVVSPTVDSEPPVPTSPVDEEGKDMEAAGDSSLDASSAACDECGTVATEAKLYKCSRCLSVRYCSKECQRHGWSVHKHTCASNAE* # ORIGINAL: g3207.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 28242 29248 . - . ID=g3207;Name=g3207.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 28242 29248 . - . ID=g3207.t1;Parent=g3207;Name=g3207.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 28937 29248 . - . ID=g3207.t1.exon1;Parent=g3207.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 28937 29248 . - 0 ID=cds.g3207.t1;Parent=g3207.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 28242 28844 . - . ID=g3207.t1.exon2;Parent=g3207.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 28242 28844 . - 0 ID=cds.g3207.t1;Parent=g3207.t1 #PROT g3207.t1 g3207 MDPKAFPPTHAQVAIKTNPVVFHLLDRAIAAGGGYDPTMAAEYMYMVRAQAALLTLARTQEEADDVRRRIAKSGAEWSILLDVLAEDYRTHHRLRMPIYSKGDKAQPNTIDQVRETYGAAMVEDVCRVVSPPSQKTHALLYAAWAVAHVSDLLAMGKTFDQIMATTDSWDIPWSSLIRTALAYHRVESNEVSTHRTHPHTQPHHAGMQRPGNAGTTDSPQQQFGGRIPPPGMFESPQEPHSPPICNTHRAPGTDTSSDRYQSGHPHIRRPARSSPIQHSQPRRVLQYNPRYKITSPESNDIPHS* # ORIGINAL: g3202.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 16364 18313 . + . ID=g3202;Name=g3202.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 16364 18313 . + . ID=g3202.t1;Parent=g3202;Name=g3202.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 16364 18313 . + . ID=g3202.t1.exon1;Parent=g3202.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 16364 18313 . + 0 ID=cds.g3202.t1;Parent=g3202.t1 #PROT g3202.t1 g3202 MASQKLEDWFAKVRSGDYDAVEKLLAKKASFWKGTVKATIKGRLPEVNDVEPGTENTALHIAAEIGSVRVVEVLLEGGAEASLRNGKGDTALHAAIRANKVDIVKQLVRVKGAHTEDRTAPRIAPIDTETCLHLACQLGRSAVVETLLGCGANVDALTSSTKRTPLHLAAAGGHPDIVLALLAQGASTSAKDGSGRTPSDLAVDAKTKGAFEEYAAQRASASSSGSHGTAKKQQEAPPPPEPKKPAGPDYYELLKVPRNVSPTTLKKSFRKLAVQYHPDKNPDAKDLFQQINHAFKVLSDPQQRDVYDKHGGDAVEELIQDNLRQKQTMVQEDLDDIFGDLAKEVDSAKANTEKNAEDDLLDRVEEQLSGMGHQPQATHNSHGVTSGYDEDVDSAASRPPVVVVADVDISVLDGLLDDIALHKSGSGIDENAGGGSKFGASPSVEDASHKRPASFHPERLFGFDPTANVLDSVQISTTPVTSPNNTTPVQRPESFHPERLFGYDPSFTAADAVPSTRAQSASPATTAQRPLSFHPERLFGLETDSTVPESTSAAVPSVIAPTIVVATSPSPTRSAAAAERAGLQLTGKDGPSARPVSFHPERLFGFDPSASVPDAVPQTIPANGSADVLAMSGNDLDKFFSDIGVSLDL* # ORIGINAL: g3198.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 1 9221 . - . ID=g3198;Name=g3198.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 1 9221 . - . ID=g3198.t1;Parent=g3198;Name=g3198.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 1 9221 . - . ID=g3198.t1.exon1;Parent=g3198.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 1 9221 . - 0 ID=cds.g3198.t1;Parent=g3198.t1 #PROT g3198.t1 g3198 MARSFRMAMSWRLFLFVCLAAVVAVDAAAPVVDLNTSTGGIDGTASFAETANTVVPVAITSGTVSVTDADISDSATLNPLYACYVKLIAAVDDDPLPDGADEEIQVNFNTMSSAKMTVDSDVDDVDFKYYTVILFGKSTSLLSGYATAIKSLKYANNKDEPTPGTRRIQVWCTDKDSNVGSAAVSTLTVTLVNDNKPVITLSGVLSAFTEQGSAAVVDSTLVVSDADLNSQFSMSSATVTIVTVTGDVANETLSLADSSLLATYSLTSAYSSAALTITGSATVAAYQAVLRSVAYRNTADEPDLTARSIRFVLNDGTLTSDAVSAAISITPVNDKTPVLKLDGTNLNYATAFSEGGSAVVLASSSLAITDADVGTTYISSATVIISNAQDTGSETLSCTSSNGITCSYNAGSFTLSLASAGSISIATYETMLKTITYINTVDEPTQTPSRLITFSVNDGSFASSVATATVVIFMVNDAPVINLNGTSSTSVDSVYVEDSNSPVVLATNDLLITDADNATFSSATVTIENPLDGASEILAATDSLSITSSYSTSTHTLTLSAVSAQPKSSWETVLKTVTYKNAANEPSSAARTVQFVINDGLASSTVDSGARAIVSIEYVNDAPVLTLNSAAGPDYAVTYTEGDGAKAIVATGFLQISDSDSTSISEATVVLDVTPDDIAESLEVDVAASGIVASYNSSTRTLVLTGTKTLSVYQTVLRTTKYQNSLANPGNPSTATRTVSFTITDVEGASSVARSSVLTLIAIGDPPVVDLNGATAGTGFAAMFTEEGADVAMVDAGALTVVDVDSTNLASATITITNILDGSEEYLHATVTGTSITATAYNSTTGVLYLSGSDTVANYQLVLRTLVYGNSADEPSSTSRSITVVASDGTASSVARTATVSIALVNDAAVLQRSDTTVVFSIAFAEDDGYAVLLPSNIALTDADATNVDLVNVTFTNYADLAVGAGDTITVTSLQGMSLTSSVSGNSKTFTITGTSLSLANANILIKSIRYVNADNAPDVSFVRTFVVNTRDTGGASSNDFTVSVTVTNSNDSPVLTDPGTPVAIDTIAEDIASASNAGTSIYASISPQIADPDANPLLGIAVTSADNSNGQWQYSTNSGSSWSNLTPSGDGIALTLSVNTKVRFLPALNFFGTATFAFVAWDQTDGLSTGAVVSDSSISAYSVGSWSASVTVTAVNDAPVVASSALTPAFVEAGSAALVFASTSVTDVDTVSLVSATIVLSGILDGSDEVVDVDENVADISVASSRVSGSHTLVVTASSTALTKAEFDAVLDSVTYSNAASEPTFGTRTVTIKVNDGALDSNSVQSSVTITLINDNAPVVAATAGTVAWTEDGSAIVIDSTLTVTDADDNVRFFMSDANVTISSVTADIAHETLAATVTGTNIVASYASGVLSLKGDDTVAHYQQVLRTVTYINGVDEPALTNRVISFAVGDGLLISNSATRTVTITAVNDKAPVMKLDGANSNFAVSFTEDSGTPVSVAGVVSITDADAGATTITSASVVIANGADTPDEVLAATDASGITSSYNAAMYTLTLTGSATLAQYASVLHSVTYVNTADEPATPGSRTVTFTVFDGAQSSSGVSTTVTISYVNDPPELTLDSVAGPNYALSYPEASGFVVIVSTNLAVIDSDNANMASATVVLTNHPDGSAESLTATASGGISVSFNAGTYTLSLTGSATKAAYATVLKTVRYRNSLGSPGNPTSGVRTVTFVVNDGTVASTSVQSSVNINGVNDAPILDLNGATSGTGFSSTFREESGSIAIVGSAALTLTDIDGPLISEATAEITNPFDGANEILLVTTTAGFTSTYSSYILRITGNGTVADYQTMLRTLRYNNPSDEPTSTTRSVRIRAFDALDWSAYAVASITIQLVNDAPIVSVNANIFTYTEDTIPTYLFGADLTVTDTDSTYMSTAIITIVNPLDSADELLFIDDNDAFDFLETNGTKSISIVGFAVPSDFVDQLRTVRYVTQSQAPNTVTQRRITLQVRDQSGARSVLVSRNITVIAVNDSPVLSQTTFTVPAIDEDILLASNTGYNITTMLASTVTDVDAGAVQGISVVGVDNSNGQWMYSLDGIAWSNILSSTSLSSALLIPSTAAKVRFVPTDNYWGTATFVFVAWDQTTGSVSGVVDASGYLDITDAFSTAMATVTTTVNSVNDPPVLTTAGPVSLASISEDITSGANTGQSLLTGLSGVITDADWDAVFGVAIIAADNTHGTWQYSINSGTSWTAMGTPSASSAILLRVLSTVRVRFLPTLDFFGTAQFTIKAWDATDGQGSGQTGASTTSAATDAPFSTSTATVQIGVDAVNDKPVVSTTGSNPSTVFSVAFQQSDAAKAVVNTGTFILLDVDNTTLSSVTIVLADKKTESGVGAYADDTLAVNTTLTTNALLTVAITGTATSTTTMVISGTATVATYKEIIASVTYRNTNPLPVPGTRSVTVVVSDGLLNSDVASTTITVSVANINSPSLTLTAGAVTWTEDSSSVVIDSALILTDADYNPLFKMSSATVIISTATADASQETLSIPAGDVPGTVTVVYTTSTRTLSITGDDDVSVYQGLLRKVKYFNAVDEPVIGSRTISFAVSDGTYSTGTVDRTLTVVAVNDKTPVLRLDGSNSADNTVDFTEDSATPVLLATSSLTLTDADSGSLPMVNATIVLAGRDGGSNEILDAVASGGISVSYNSATYTLTLDGSASVSAYATVLKTLTYVNLADEPAGGPDTRSVTFTVYDGTFSSVTVSTTVTIVYVNDLPDVTVTGDFASIDSTTGYTEGDGAVLIAALLDARDSDDTHLSKVYVTISPVPDGAEEVLAAVVLGTSISQTFVTTSTTSARLSLTGDDTIANYIGVLQTLTYENQNTDRPGTATRTVTIVVYDSFGLDGLPATITIPFTAVNDAPTLDLNGATAGTGASATFIEDTGSAVLVPNALVGDVDSDTLSSMTLILTNAVDALENITVTTASLTVTPYDPNTGVLVISGVAASSVYQTVLRTIEYMNLEDEPTTTTRIITVRVNDGLVDSALRTVSVAIQLVNDPPVMVDAGATITFTENDADTAIFTSGLVD # PASA_UPDATE: g3199.t1, single gene model update, valid-1, status:[pasa:asmbl_2408,status:12], valid-1 NODE_170_length_33577_cov_43.0288 . gene 10207 11350 . + . ID=g3199;Name=g3199.t1 NODE_170_length_33577_cov_43.0288 . mRNA 10207 11350 . + . ID=g3199.t1;Parent=g3199;Name=g3199.t1 NODE_170_length_33577_cov_43.0288 . five_prime_UTR 10207 10255 . + . ID=g3199.t1.utr5p1;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . exon 10207 10293 . + . ID=g3199.t1.exon1;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . CDS 10256 10293 . + 0 ID=cds.g3199.t1;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . exon 10501 10637 . + . ID=g3199.t1.exon2;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . CDS 10501 10637 . + 1 ID=cds.g3199.t1;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . exon 11229 11350 . + . ID=g3199.t1.exon3;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . CDS 11229 11269 . + 2 ID=cds.g3199.t1;Parent=g3199.t1 NODE_170_length_33577_cov_43.0288 . three_prime_UTR 11270 11350 . + . ID=g3199.t1.utr3p1;Parent=g3199.t1 #PROT g3199.t1 g3199 MSKGAAWRAAGMNYLQYSSLCARLVRRALKEEHKVVALRREEHGLKMFKWENGKATAPKELYDAGNSQASA* # PASA_UPDATE: g3201.t1, single gene model update, valid-1, status:[pasa:asmbl_2411,status:3], valid-1 NODE_170_length_33577_cov_43.0288 . gene 14234 16183 . + . ID=g3201;Name=g3201.t1 NODE_170_length_33577_cov_43.0288 . mRNA 14234 16183 . + . ID=g3201.t1;Parent=g3201;Name=g3201.t1 NODE_170_length_33577_cov_43.0288 . five_prime_UTR 14234 14489 . + . ID=g3201.t1.utr5p1;Parent=g3201.t1 NODE_170_length_33577_cov_43.0288 . exon 14234 16183 . + . ID=g3201.t1.exon1;Parent=g3201.t1 NODE_170_length_33577_cov_43.0288 . CDS 14490 15869 . + 0 ID=cds.g3201.t1;Parent=g3201.t1 NODE_170_length_33577_cov_43.0288 . three_prime_UTR 15870 16183 . + . ID=g3201.t1.utr3p1;Parent=g3201.t1 #PROT g3201.t1 g3201 MEREKLSVFVGTWNVGNAPPPADLSPWIPRDACDIYAIGVQECQYEQRPPYESCEDDWFSTIRSHLGGDYEPLECFSITPMTVDTYKNPEDFMKAVESGKARSGEIRLGVFVRRSIAHKVSATQKALRTTGRLNGLSGNKGGLCVYFRYGEATFVFINAHLNAHAENLERRNQDVVSINSGLRVGHTEFDAVTQSTFAFWFGDLNYRLDFEDVELSNRLLANADASGLCAYDQLKREQDGGRAFQGFSEGEIKFLPTFKVKKGKGTYDPQRVPSYCDRVMYRAHPGCGISIRSYTSAPGVLTSDHMPVSATFDVEPIYRIPTGFAASGVTAAITFSGLRVHKLQPSSKHFVTDSTCQPVLKAAVITSKSTSEGDIKSPAVDWSWTDSLRIAVLSSNVDYVRESHVLIAMRDSKRPRNLLGEGVVSLAGVDSTPKEFEVQLRQFGLPIAVLCGTVRLDEE* # ORIGINAL: g3205.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 24102 26346 . - . ID=g3205;Name=g3205.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 24102 26346 . - . ID=g3205.t1;Parent=g3205;Name=g3205.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 24355 26346 . - . ID=g3205.t1.exon1;Parent=g3205.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 24355 26346 . - 0 ID=cds.g3205.t1;Parent=g3205.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 24102 24215 . - . ID=g3205.t1.exon2;Parent=g3205.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 24102 24215 . - 0 ID=cds.g3205.t1;Parent=g3205.t1 #PROT g3205.t1 g3205 MATADAKSAADAGVVPRRGLVSLKRVGMPARSPAKAVRTPIDPSEDDDNNYDSPATMRENTLTSSGIAQSNSRPSTPGQSSRSSSAASLVRPMSAVSLKAAHERSASALLLARPPSQGATSRPPTSQSARTAPAAPPAHVVTHSERSSSRASSKRSTPASSAPSSPKTVHVSTRLPTTVIARSVKSVTSPSSAKSGKTETGARVTAAPKAGLQKLATVRTQPKTTLRAPVTATMASRSARPERGELSNGPFDVLPDEIVVQILSLLGCDALLNLSLVSRRLSRLASDPQLWKKHCVRRWGAGVAWISRLQDEAAAAKWKRAYLSHIARQRSHWVSTQCTKASPYTGLPKAASLLTALRVRWELKIIDIDGRATVLPADEATDHTLSTAVRWRTGIPADMRLTNVASIEVYALVPLLADPMAQQRAPVKSGTKGISSSSPAALDTRVVAAESTAAVPVRRSLLCAVDGASRVGIENVCRPLASEGSATVFVVDGSCFIVGCWSSGGGIAFVTANLHHDGLVELVLRGNDKNVYLRPSHAPIHDDVDPSYGLHDYAFVVEVRSEKKGRWSNRFDGIHFRGGEDSSSSAARAIKLMSNGTDQPVSSGAKITKRKTSASSSSPGASASASLDDLVADFVVLEEGGTSHAFTGRPSTACKSEAFEHVLENVVIIDFVLLDEHKHIAWSESRMVALDCAGEDDGKPH* # PASA_UPDATE: g3204.t1, single gene model update, valid-1, status:[pasa:asmbl_2409,status:12], valid-1 NODE_170_length_33577_cov_43.0288 . gene 21388 23236 . - . ID=g3204;Name=g3204.t1 NODE_170_length_33577_cov_43.0288 . mRNA 21388 23236 . - . ID=g3204.t1;Parent=g3204;Name=g3204.t1 NODE_170_length_33577_cov_43.0288 . five_prime_UTR 23219 23236 . - . ID=g3204.t1.utr5p1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . exon 22939 23236 . - . ID=g3204.t1.exon1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . CDS 22939 23218 . - 0 ID=cds.g3204.t1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . exon 22671 22794 . - . ID=g3204.t1.exon2;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . CDS 22671 22794 . - 2 ID=cds.g3204.t1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . exon 22154 22388 . - . ID=g3204.t1.exon3;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . CDS 22154 22388 . - 1 ID=cds.g3204.t1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . exon 21388 21913 . - . ID=g3204.t1.exon4;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . CDS 21509 21913 . - 0 ID=cds.g3204.t1;Parent=g3204.t1 NODE_170_length_33577_cov_43.0288 . three_prime_UTR 21388 21508 . - . ID=g3204.t1.utr3p1;Parent=g3204.t1 #PROT g3204.t1 g3204 MHENLRMRPTVRVLGEGDWDLEDIVTRLFSREDAAVKTALGDIIRCAGCDPNFSKAFLSRLSLNSLFKYFTSTSDEDIMELAASAVTNLSGPLARGPTTKTYLVDEKYRFSLTEPDFVSADVGWCTWPSALLVARHVLLGNLQVAGPRIIEIGCGTGAFGISLALSHLGKGALPSTPANDRPTIVLTDFLDSIVDTASQNASLNGCADFVSVQKLDWRDVITAAEERDRGSTSTSSSPPSEGVLRAGLLLGTFDDVIVADCIYEPDHPALVAKCASLLMKPVSGRLSAMVPLGDRRPHVARLDAGLIAAGLDVSDVTVLEGDTFFAGDVGTTFALYKCGWQGVSKDR* # ORIGINAL: g3209.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 31103 33016 . + . ID=g3209;Name=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 31103 33016 . + . ID=g3209.t1;Parent=g3209;Name=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 31103 31869 . + . ID=g3209.t1.exon1;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 31103 31869 . + 0 ID=cds.g3209.t1;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 32007 32106 . + . ID=g3209.t1.exon2;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 32007 32106 . + 1 ID=cds.g3209.t1;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 32220 32725 . + . ID=g3209.t1.exon3;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 32220 32725 . + 0 ID=cds.g3209.t1;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 32860 33016 . + . ID=g3209.t1.exon4;Parent=g3209.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 32860 33016 . + 1 ID=cds.g3209.t1;Parent=g3209.t1 #PROT g3209.t1 g3209 MDNVRIDPDAVAAACFDRFRRLPKRGKPQKGKEWTVLAGVLLESPSTAVPVTTTATHVVALGTGSKCEGCDTISVKGDQLFDSHAEVIARRAFVRYIYSEAEKVINAARGGMVHGGEGKHAAVSKVFELSSEEDAYPLRLRDGVRFHLFVSQAPCGDACIFPLELPAGKQRDEFERENFGIASLPSTTGGKRVREDDGEELENTDLSPNAKRPKVDASEDDGIDEHRTSDNEKHAKRQPPRPLIHAEGDIHRTGARCVPGGQQDRHEPLGSYHEAGILRTKPGRGNPTKSMSCSDKIALWTVVGLQGSLIASLAGPIYLHSVTIGRHYNSDALERALSLRLNAPLELPSGYTRHVPVILSTSCRFEHDRETAEAFARASQLPGAKKFPHIAGAASIGWWEGASEQEATTKGRIQGVTPSGIEWSARAMSMLCKTSLAALFNKTVTSLADVGKKPLLESSAAEAKTYLDLKRASSRYRSARDAVLAGPLCGWVGNSAVQHEAFEARLGEQ* # ORIGINAL: g3200.t1 original gene structure, not modified by PASA NODE_170_length_33577_cov_43.0288 AUGUSTUS gene 12341 13779 . + . ID=g3200;Name=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS mRNA 12341 13779 . + . ID=g3200.t1;Parent=g3200;Name=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 12341 12461 . + . ID=g3200.t1.exon1;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 12341 12461 . + 0 ID=cds.g3200.t1;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 12730 12822 . + . ID=g3200.t1.exon2;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 12730 12822 . + 2 ID=cds.g3200.t1;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 12925 13103 . + . ID=g3200.t1.exon3;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 12925 13103 . + 2 ID=cds.g3200.t1;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS exon 13258 13779 . + . ID=g3200.t1.exon4;Parent=g3200.t1 NODE_170_length_33577_cov_43.0288 AUGUSTUS CDS 13258 13779 . + 0 ID=cds.g3200.t1;Parent=g3200.t1 #PROT g3200.t1 g3200 MAPASQPTSAVVHPLVLLSVVDHYSRAARDSKKRVVGILLVPFEEDEKDPSVWFLDHNYLDNMWAMFRKVNAKERIIGWYHTGPKLRQNDLEINELIRRFTPSPLLVIIGVHPKDQGLPSDAYIAVEEIHEDGTPSSKTFEHIASEIGAEEAEEVGVEHLLRDIKDSTVGTLAERITTQLTSLRRLFSRLQEIHDYLGKVSDGKLPVNHQIVYQLQDIFNLLPNVNVEEMVQSFAVETNDEMLVIYLSSLIRAVIALHGLINNKISNREAEKKLDQPKEEKKEPAKDAKDAKDGKDKKKADGKD* # ORIGINAL: g2780.t1 original gene structure, not modified by PASA NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS gene 237 497 . - . ID=g2780;Name=g2780.t1 NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS mRNA 237 497 . - . ID=g2780.t1;Parent=g2780;Name=g2780.t1 NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS exon 495 497 . - . ID=g2780.t1.exon1;Parent=g2780.t1 NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS CDS 495 497 . - 0 ID=cds.g2780.t1;Parent=g2780.t1 NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS exon 237 391 . - . ID=g2780.t1.exon2;Parent=g2780.t1 NODE_6176_length_624_cov_34.337_potentialcontaminant AUGUSTUS CDS 237 391 . - 0 ID=cds.g2780.t1;Parent=g2780.t1 #PROT g2780.t1 g2780 MAFDLQVQDNYIHDIPGMGLYVAGGSERVIAQRNLIRHCGLMGIGFGFYADY # ORIGINAL: g2628.t1 original gene structure, not modified by PASA NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS gene 5186 6362 . - . ID=g2628;Name=g2628.t1 NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS mRNA 5186 6362 . - . ID=g2628.t1;Parent=g2628;Name=g2628.t1 NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS exon 5492 6362 . - . ID=g2628.t1.exon1;Parent=g2628.t1 NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS CDS 5492 6362 . - 0 ID=cds.g2628.t1;Parent=g2628.t1 NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS exon 5186 5247 . - . ID=g2628.t1.exon2;Parent=g2628.t1 NODE_2313_length_6759_cov_104.642_potentialcontaminant AUGUSTUS CDS 5186 5247 . - 2 ID=cds.g2628.t1;Parent=g2628.t1 #PROT g2628.t1 g2628 MSDVVAVGFNLLAPETVVHHIVPYLSNVDVSSLAKVNRALHVHLRQKRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVLDGCNRGEAHRELAPFAGAYSVTLDDRGSLPDLTPVHGVKQLVLLRSVTIDVAPFSNLQRFSMMNSAVMNLDALSMVRDIELRGVSLESIEFVGATRVSIVSCYLFYNNTVHNITDISGLRNARYVHLERLEGLVDVSPLANAREVTIKQCKLVSQSSLRALGRVSKLHLADLQLSAIPTEFAHTHTLELGTDILADVSEIRTVHTLVLREAVTWWMFRPLEIVILLTLA* # PASA_UPDATE: g6223.t1, single gene model update, valid-1, status:[pasa:asmbl_2328,status:12], valid-1 NODE_1688_length_9716_cov_38.9518 . gene 4407 7858 . - . ID=g6223;Name=g6223.t1 NODE_1688_length_9716_cov_38.9518 . mRNA 4407 7858 . - . ID=g6223.t1;Parent=g6223;Name=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 7784 7858 . - . ID=g6223.t1.exon1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 7784 7858 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 7453 7579 . - . ID=g6223.t1.exon2;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 7453 7579 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 7063 7168 . - . ID=g6223.t1.exon3;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 7063 7168 . - 2 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 6552 6873 . - . ID=g6223.t1.exon4;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 6552 6873 . - 1 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 6163 6243 . - . ID=g6223.t1.exon5;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 6163 6243 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 5763 5858 . - . ID=g6223.t1.exon6;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 5763 5858 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 5402 5518 . - . ID=g6223.t1.exon7;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 5402 5518 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 4923 5117 . - . ID=g6223.t1.exon8;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 4923 5117 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . exon 4407 4760 . - . ID=g6223.t1.exon9;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . CDS 4692 4760 . - 0 ID=cds.g6223.t1;Parent=g6223.t1 NODE_1688_length_9716_cov_38.9518 . three_prime_UTR 4407 4691 . - . ID=g6223.t1.utr3p1;Parent=g6223.t1 #PROT g6223.t1 g6223 MTLNIDSPKVYTKAGVAISVTGVAQVKIEGQFDEMLRNACQQFLGKTPHQIHQIALETLEGHQRAIMGTMTVEEIYQDRKKFAEAVFQVASTDLSNMGITIVSYTIKDVRDDEGYLDALGMKRTAEVKRDAAIGEAEAKRDAGILQARAEQARMAAKLLNDTAVAQSQRDFQLKKAAYDAEVNTKKADEELAYELQAAKTKQQIREEQIQVEVIERKKQIEVQVQEIARKEKELEAQVRRPALAEKYRLETIAEANKNKVILEAEARAEAIRARGEAEAFAIQAKAKAEAEQMAKKADAWKEYGDAAMVDMLLSTLPRIAAEIAAPLTETSRIVMVSGGNGPVGAAKLTGEVLEIMQSLPDVVNKLTGVDISKSISRGSAEASITLTGRRQSTQA* # PASA_UPDATE: g6222.t1, single gene model update, valid-1, status:[pasa:asmbl_2327,status:3], valid-1 NODE_1688_length_9716_cov_38.9518 . gene 496 4098 . + . ID=g6222;Name=g6222.t1 NODE_1688_length_9716_cov_38.9518 . mRNA 496 4098 . + . ID=g6222.t1;Parent=g6222;Name=g6222.t1 NODE_1688_length_9716_cov_38.9518 . five_prime_UTR 496 835 . + . ID=g6222.t1.utr5p1;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . exon 496 1049 . + . ID=g6222.t1.exon1;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . CDS 836 1049 . + 0 ID=cds.g6222.t1;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . exon 1288 2560 . + . ID=g6222.t1.exon2;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . CDS 1288 2560 . + 2 ID=cds.g6222.t1;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . exon 2668 4098 . + . ID=g6222.t1.exon3;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . CDS 2668 4024 . + 1 ID=cds.g6222.t1;Parent=g6222.t1 NODE_1688_length_9716_cov_38.9518 . three_prime_UTR 4025 4098 . + . ID=g6222.t1.utr3p1;Parent=g6222.t1 #PROT g6222.t1 g6222 MAAALPPQTQLIGNYEVVGVLGTGSVARVLRVTHIPTDTRLVMKIIRKDRIPEAQYAEEGRVMRLIAHRYMARLYEIIESEKEFCLVMDLGPKMTMGDYMRKNGRMREGDVQRIMRKLVSALEYLHGKGIAHKNLTPQNVLYDSKSGLLTIIDFGWCGKASHEDIIANSHGFEAYIAPEMTSRKKAGMEADVWALGVMLYQMIEGKAPFQMDGLGIEGLAHRQLHGEYEPMKRGSGQCHDLVRCMLNPSPRERIGTEALRLHPWIGAGYQPNEGRRDDPHGRLAELKEDIAGAMLSQHARDLVLARMSEMSFDREWVLASVAENRCNQASATFHYLAPKIRNALLGAEKKAKAFADERERAEIERREQEKLRRYTEEMRERAEKVEERRIQRLEREKKLEAARRHRELTASGRSESTRVEAGLQELMRNLEGRVSRRKSDEAAFVEATRTLVDVSHARKAAAVVSVRPPSSAEQRMTSSDPSFPPQPAWESPLGDRYGACIVDPGSPLVRKLLVEPIFGRHLPSDNSTRTSAVNVNGPAMSGQSSASAGGRGGGASNATLAEEEGKEDGGHEETGADFSDAAHIARIKNMESGVFRPPSLMRKGSLIGARMSIAINAIQQQQQQRRKDSAAGQISNAGIPELSRRGSGLNLTTNLPTAPSTPTGMPNSLQRIANLNSANAAAASAAAAHVHAHPTQAVLTAHNTAGGGGGGGASNGGTIAVAQGSTSEEPPRFPAAFVQSGKAMLQQFYREQHRAVQAELETAARMARKQKHDARTVRLAFDSDVATTRLPEVIMDETVRALGSLHIRFRPTDDGTYALDCSVVDKSQSRRLRKQRRAQEASVGGEGGSNPDGKVLLTHVDHCEHSEDSSGEDDGGKECDQDDGDWNDELDVHAEGGDGGRRGLRFIAEVCKLPRPLLHGLRLRKTEGDDGEAQRLFTRLVSSLELS* # PASA_UPDATE: g742.t1, single gene model update, valid-1, status:[pasa:asmbl_6065,status:12], valid-1 NODE_3436_length_3466_cov_31.0077 . gene 225 3400 . + . ID=g742;Name=g742.t1 NODE_3436_length_3466_cov_31.0077 . mRNA 225 3400 . + . ID=g742.t1;Parent=g742;Name=g742.t1 NODE_3436_length_3466_cov_31.0077 . five_prime_UTR 225 225 . + . ID=g742.t1.utr5p1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 225 312 . + . ID=g742.t1.exon1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 226 312 . + 0 ID=cds.g742.t1;Parent=g742.t1;5_prime_partial=true NODE_3436_length_3466_cov_31.0077 . exon 775 896 . + . ID=g742.t1.exon2;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 775 896 . + 0 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 1262 1462 . + . ID=g742.t1.exon3;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 1262 1462 . + 1 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 1747 1860 . + . ID=g742.t1.exon4;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 1747 1860 . + 1 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 1992 2129 . + . ID=g742.t1.exon5;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 1992 2129 . + 1 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 2250 2396 . + . ID=g742.t1.exon6;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 2250 2396 . + 1 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 2545 2611 . + . ID=g742.t1.exon7;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 2545 2611 . + 1 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 2850 3014 . + . ID=g742.t1.exon8;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 2850 3014 . + 0 ID=cds.g742.t1;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . exon 3313 3400 . + . ID=g742.t1.exon9;Parent=g742.t1 NODE_3436_length_3466_cov_31.0077 . CDS 3313 3400 . + 0 ID=cds.g742.t1;Parent=g742.t1;3_prime_partial=true #PROT g742.t1 g742 QTYPLVVKCRTAARYRTLSPDWFETFDIKVTDARILQILCRDHEKIGASNPCGDGSILLETLADGKPLTRVVDLHHKTGISPKGKVLVRIVYETGLPMFGLSLPQLLRREKTQVPKVVTACIDQVKQRGINEVGVYRLSGSKLNVKKMASEFATEVVVSRLNGEDIHNITSLLKNFFLLLPDPLFTSKLHDKWLEAEKIADTAEKKRAFIALFEELPEESRPTTAYILDHLSRVYERREFNQMTAQNLAIVFGPTLMTPPPQMTDMAAARSNITAYIAVIKFMIEEWPLLDKWARVASSTSTMPIPSSSRAPAVYDDVDPDARMALTLFEKYDKDKSGKLELDEFKLLCAEFGIVDGIDEIMRKLDSDGDNSISFK # ORIGINAL: g8594.t1 original gene structure, not modified by PASA NODE_1405_length_11545_cov_44.7585 AUGUSTUS gene 267 2553 . + . ID=g8594;Name=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS mRNA 267 2553 . + . ID=g8594.t1;Parent=g8594;Name=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 267 747 . + . ID=g8594.t1.exon1;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 267 747 . + 0 ID=cds.g8594.t1;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 854 1068 . + . ID=g8594.t1.exon2;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 854 1068 . + 2 ID=cds.g8594.t1;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 1677 1810 . + . ID=g8594.t1.exon3;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 1677 1810 . + 0 ID=cds.g8594.t1;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 1892 2025 . + . ID=g8594.t1.exon4;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 1892 2025 . + 1 ID=cds.g8594.t1;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 2153 2553 . + . ID=g8594.t1.exon5;Parent=g8594.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 2153 2553 . + 2 ID=cds.g8594.t1;Parent=g8594.t1 #PROT g8594.t1 g8594 MIKFSWKEDTSSGPIIKTFIFRDGRLVLQGPTATEYKDRHVAFGQTYVYEIISVNQYGNSTATRFNETASIGPTDSSTPTAGASSSTNVAGPVAGSIVGAIVGAAAIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLGDITPRGESPGLIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQTENGWKLSPKAQVIVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYALSNYLSQNKRMEPPNDCPKLVTAAMEACWRKHAETRPQFSQIVRQLRRGMAILCGTEGGEGGGGSSRGGGGGGGGAGGDWDRTYSAGERSETYALTVPEDTYAETVKPGEDGSLLTLENVMFQNESISTTGHSFA* # ORIGINAL: g8596.t1 original gene structure, not modified by PASA NODE_1405_length_11545_cov_44.7585 AUGUSTUS gene 10855 11545 . - . ID=g8596;Name=g8596.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS mRNA 10855 11545 . - . ID=g8596.t1;Parent=g8596;Name=g8596.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 10855 11545 . - . ID=g8596.t1.exon1;Parent=g8596.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 10855 11545 . - 1 ID=cds.g8596.t1;Parent=g8596.t1 #PROT g8596.t1 g8596 RLIVSNDGINVQPNGIKTREKPDWAHVDQSQSPNIFECVQGQVVLTNTTASFVCSPKSHLAFEQILATRNVGLGNPSNWCKLGDAADTAKAIIESLGGQYQIPVVAPAGSLILWLSSLVHSARASTTVETPSQLDPWLGWRGIVYVSYRPRDEYSAAELGQRSRVHSQNRVTNHWGTRVFPKIPGGRFTKTVERHPVINRLLDRPETVFEQLGINPTFLNTPDIRAITS* # ORIGINAL: g8595.t1 original gene structure, not modified by PASA NODE_1405_length_11545_cov_44.7585 AUGUSTUS gene 5057 8643 . + . ID=g8595;Name=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS mRNA 5057 8643 . + . ID=g8595.t1;Parent=g8595;Name=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 5057 5209 . + . ID=g8595.t1.exon1;Parent=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 5057 5209 . + 0 ID=cds.g8595.t1;Parent=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 5368 5567 . + . ID=g8595.t1.exon2;Parent=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 5368 5567 . + 0 ID=cds.g8595.t1;Parent=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS exon 5691 8643 . + . ID=g8595.t1.exon3;Parent=g8595.t1 NODE_1405_length_11545_cov_44.7585 AUGUSTUS CDS 5691 8643 . + 1 ID=cds.g8595.t1;Parent=g8595.t1 #PROT g8595.t1 g8595 MHVAAQVVVLLVLQLQYRYADSIQTVAASVNVTFYLTGGWQGNFLPLQDSAGAYGGLARFATVLRERHDVAFAETGNNDTVTIGVDMGAFFGVSPFSQFAPKQLFYNMLADLGISVFSITATDTFDGLGNYLTNMDALQARQRTSIVLSNAVLNSATSQRLMRVFQPFQFISANNFTIGVLGFVDDGFCGRAPYSCGPGTEQFAGISNADPELIEKTFNLMIQAAPQRPQLIVALLPGIALGFDASPLPMLLIRAGVDVIVVNDGAYQTTAEAIDPTFIPPAALEIVDPTSGRRGIYASGLSDGRAIGKVDLEIGATVILKSTTRLIQLRECINGTRTSSCVVPATDVTVTVSQISTDVSRMIDTTVVGYLSTPIDGGPLSCRFAECGVGDLASDAMRSVIPNCDIAFLNGGGLRSSFAAGNVTERALLTTVPFQDSIASFTLRGTDLLATIRHGLSRVDNITTIPTIAPYPGTGRYLQFSGLRIRYNPMESLEKRLISVEIEVGPGVYSILNSFIAYRCCALVYMMNGGDDYTMLKTNALNRVDTVYTQETVIRTYLAKFPQGLNYTTPTKRIVIDTTAAEFKCSPSCVHGTCTSSFVCNCSTDWTGSDCGTSVPVDSCAVHKARGVTLLSARDAATNFPGGIAAVVVFATLFGAEICLVPFLTQRYAGVVRATSHRGNPGTMSTARWNLQNGVRLGLLCLQAIQLHAIVLNVDLSHGTVITVGGSAFGSIGATYFSGTYFWYFWVIMSVTLLWVFYAIIYIIDGGIFVRRHFIGRVVIYPADQLLQIWVTAGFIPTLLQGLRAFHCWYIGTVAYMAVDSVCDVPCWSGEHWKYVVVAAVTILVYYPLSSISAMLWQDLNDLLDVRHKSHFFIVEPVIKCTLVCLRVFFPHVTVAYLVVITLICASVSAYHLRCTPCFVEWVNVPVAITYVSASLTAIFLLAGVLADNVVVFYGAVVVWFVCTAAIATSLRRYSSPLFFRHLGAGLLDTRARDMLMAMKKVFVATSRISLRRTSMQAKVAPALNDSGNDGDSDDEVLQIVLSAVARDELDATVLSKVRAAISIGHRWPIVIYRASTDDNGFIACLDELFMDLHPTRTVDI* # ORIGINAL: g12846.t1 original gene structure, not modified by PASA NODE_3965_length_2440_cov_54.1129 AUGUSTUS gene 257 1176 . - . ID=g12846;Name=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS mRNA 257 1176 . - . ID=g12846.t1;Parent=g12846;Name=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS exon 1108 1176 . - . ID=g12846.t1.exon1;Parent=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS CDS 1108 1176 . - 0 ID=cds.g12846.t1;Parent=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS exon 855 943 . - . ID=g12846.t1.exon2;Parent=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS CDS 855 943 . - 0 ID=cds.g12846.t1;Parent=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS exon 257 441 . - . ID=g12846.t1.exon3;Parent=g12846.t1 NODE_3965_length_2440_cov_54.1129 AUGUSTUS CDS 257 441 . - 1 ID=cds.g12846.t1;Parent=g12846.t1 #PROT g12846.t1 g12846 MDFSRTKQRPNILDRPLHKTRGEVSLSAFSFLFSEIIQYCQNRVDSIPALEKKLSDIGYRVGFRLLELMCHREKTGKRETRLLNIIYFINTVVWKTLFGKQADLLEKDSEQDDT # PASA_UPDATE: g5609.t1, single gene model update, valid-1, status:[pasa:asmbl_7300,status:3], valid-1 NODE_441_length_23728_cov_42.0691 . gene 5784 8103 . + . ID=g5609;Name=g5609.t1 NODE_441_length_23728_cov_42.0691 . mRNA 5784 8103 . + . ID=g5609.t1;Parent=g5609;Name=g5609.t1 NODE_441_length_23728_cov_42.0691 . five_prime_UTR 5784 6094 . + . ID=g5609.t1.utr5p1;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . five_prime_UTR 6279 6299 . + . ID=g5609.t1.utr5p2;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . exon 5784 6094 . + . ID=g5609.t1.exon1;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . exon 6279 6492 . + . ID=g5609.t1.exon2;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . CDS 6300 6492 . + 0 ID=cds.g5609.t1;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . exon 6607 8103 . + . ID=g5609.t1.exon3;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . CDS 6607 7664 . + 2 ID=cds.g5609.t1;Parent=g5609.t1 NODE_441_length_23728_cov_42.0691 . three_prime_UTR 7665 8103 . + . ID=g5609.t1.utr3p1;Parent=g5609.t1 #PROT g5609.t1 g5609 MDAADQLASALQKVRNLESAVSFMQKEHGATLAGLHGELSRLQERCADLTFQVAIKEDIILAEHDGRDVVIRFEKDLSLLHARNDVLERSAKDSDTKIDELEKELAAQRRRHKEQLQRRDATISRLGNELEDRARTIARLTSQIHRAGLKAGKDVENAEFGGTDSVNPVMSSRIEHGGHGHRHPGYRSSVGSSLDSQRRTRGSSINALSSRDDGDDSWGNAASGTGHAMLHDDGEVDAGAFAPRPPGERPASARSRPTSASSVRRASFGASRPTSAATRIVPPLAAPDVAPETKYGVLPPINPSSVWATPAGGELESVESDDSNPLPPPTPPPASSSKMRRFARVRSDGQPRLAREVTAADAFADDVNGLSGAFSGVSLTSSGRALDNDEGAVVRLVRVDGRTSDAKKPLPQQHHA* # PASA_UPDATE: g5608.t1, single gene model update, valid-1, status:[pasa:asmbl_7298,status:12], valid-1 NODE_441_length_23728_cov_42.0691 . gene 108 3341 . - . ID=g5608;Name=g5608.t1 NODE_441_length_23728_cov_42.0691 . mRNA 108 3341 . - . ID=g5608.t1;Parent=g5608;Name=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 3168 3341 . - . ID=g5608.t1.exon1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 3168 3341 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 2911 3001 . - . ID=g5608.t1.exon2;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 2911 3001 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 2576 2649 . - . ID=g5608.t1.exon3;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 2576 2649 . - 2 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 2271 2323 . - . ID=g5608.t1.exon4;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 2271 2323 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 2108 2162 . - . ID=g5608.t1.exon5;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 2108 2162 . - 1 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 1816 1872 . - . ID=g5608.t1.exon6;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 1816 1872 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 1554 1635 . - . ID=g5608.t1.exon7;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 1554 1635 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 1303 1376 . - . ID=g5608.t1.exon8;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 1303 1376 . - 2 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 975 1082 . - . ID=g5608.t1.exon9;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 975 1082 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 655 717 . - . ID=g5608.t1.exon10;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 655 717 . - 0 ID=cds.g5608.t1;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . exon 108 537 . - . ID=g5608.t1.exon11;Parent=g5608.t1 NODE_441_length_23728_cov_42.0691 . CDS 108 537 . - 0 ID=cds.g5608.t1;Parent=g5608.t1;3_prime_partial=true #PROT g5608.t1 g5608 MTNRRKLRKHPPTRSIPREQVAAHRGPTSLSMWFLTGTEIDGNAHMGHLRGSFLESDKRKDASVAMADFGKHPLANIIAGFPRLTDIQVAITEAIQKSGHSCAVDDIIDYVSKRWQNLRRKDGIPYHTKIRTVVENTLKGQGQEYRLFKPAPYLESGWSLCTTEEKLGRTGTNDESEAEPEAAPRGPFTEITELQALIIESIREQGGIGHVDSVCEHVGKTWGNLRKRDGTRYAPDCRRSVMSSLTNSSNSNPIFRRDAEDSSLWHITDHARDLLRRTETALQWGDANEAELRGLGVRERSIGHAILRQNSIMVSSALAKSAANGSPSTANGNSTPLVTPQNGSSRASALSRRTASSDAVEASKEGEDGARNGFGSDGDNDSGNEEENGSPSEANAESDMDADGATDEFVANKLGLTALQ # ORIGINAL: g5611.t1 original gene structure, not modified by PASA NODE_441_length_23728_cov_42.0691 AUGUSTUS gene 14626 16939 . + . ID=g5611;Name=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS mRNA 14626 16939 . + . ID=g5611.t1;Parent=g5611;Name=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 14626 14659 . + . ID=g5611.t1.exon1;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 14626 14659 . + 0 ID=cds.g5611.t1;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 14790 15150 . + . ID=g5611.t1.exon2;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 14790 15150 . + 2 ID=cds.g5611.t1;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 15448 15649 . + . ID=g5611.t1.exon3;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 15448 15649 . + 1 ID=cds.g5611.t1;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 15814 16693 . + . ID=g5611.t1.exon4;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 15814 16693 . + 0 ID=cds.g5611.t1;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 16848 16939 . + . ID=g5611.t1.exon5;Parent=g5611.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 16848 16939 . + 2 ID=cds.g5611.t1;Parent=g5611.t1 #PROT g5611.t1 g5611 MSAETGSGKTLAYLLPSLRVPEWFREAYKEASIKTTDEAEAAGDARDNAGTSTDAHTRDRKPGLRYPSVLVLVPSMDLAYQVARMSISAGISAIVARKDSLYFERSEHPWAVSPVHKERLEALKEGDSARPRGLAIPAPYICVGTPAGLWNSRDTFHNVFPQIHTVVVDESDALMDDGAVKTTELVLTAIRNVHARRTEESVRLERSQKLKARKVSMNTSNGGGGKHDTTASDAPIESHDVAAQPKDASVEARVRELPETACAANDARSVDDVARYPPKPATSDTGAVQFLSQRIVFVGATLPSKTSGSVGQWILRRYPHAVRIDTPATHHVVDRIQQKFVRLESEEEKMPAVENLLLSELGFRKYSTGGRKSASPSRRNKDDSISANGESALSPRALIFVRTTERAILTHDALAASGFRVRAYHADMKLEERVASLDALREGSVDMLVCTDGAARGLDLPVDHVVQLDFALSAVSYIHRCGRTGRAGRGGSVRGKQSLDTAFSRNRNFRRQLKRHVAKASK* # PASA_UPDATE: g5610.t1, single gene model update, valid-1, status:[pasa:asmbl_7299,status:12],[pasa:asmbl_7303,status:12], valid-1 NODE_441_length_23728_cov_42.0691 . gene 8169 13389 . - . ID=g5610;Name=g5610.t1 NODE_441_length_23728_cov_42.0691 . mRNA 8169 13389 . - . ID=g5610.t1;Parent=g5610;Name=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 13371 13389 . - . ID=g5610.t1.exon1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 13371 13389 . - 0 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 13158 13252 . - . ID=g5610.t1.exon2;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 13158 13252 . - 2 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 12641 13043 . - . ID=g5610.t1.exon3;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 12641 13043 . - 0 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 10831 12440 . - . ID=g5610.t1.exon4;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 10831 12440 . - 2 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 8660 10732 . - . ID=g5610.t1.exon5;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 8660 10732 . - 0 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . exon 8169 8419 . - . ID=g5610.t1.exon6;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . CDS 8246 8419 . - 0 ID=cds.g5610.t1;Parent=g5610.t1 NODE_441_length_23728_cov_42.0691 . three_prime_UTR 8169 8245 . - . ID=g5610.t1.utr3p1;Parent=g5610.t1 #PROT g5610.t1 g5610 MDAKPAERRLQAPANRSYRLFGDPNITPDAQPNYIVLTGDERSTTDPRRLDALYLSSLANVQHDLPLPKFRVGEASGDASNAPPPPRAEPSGPKPVVILSGLPMKADRRFMLRLLADYKCDESRLRMYFSPERKFGVCRAVLGDAACVRRAVDELPSRSIIDRKANVDADELGGRFESMKTKWKLKIHPCDDPKRKQPRGDDGAGGQSQQRGTEHATTNGTLVEVSIAVSVDAAIISDPPAPAIAKDELGAEAMDISPICEGGGIVVELKPSGDAVVQKDVGVFGASSFRPAADHALSLPAPKSHLQHPHSHSFADSSDNVRTPAIIASCRVTMSMAEVLEFFAAHAPLHAYIHHQPHKWCVLFKTEENRDAAVAALHNARLSAMFDARVELESAWRCGNRVTTRSEEEAAKKEEEKRKQRDADLLQSRMQAAYAAANAISTKPSLLSTPPVPTHSSNRTQQYSSGVSVAQEYLSSLSIPPNRATTTTTALPVSLHSTTHTPKQPYAAPQDKYDSHYRSNGQWQSGHSRSQYRPHKDDRSYSHSSSHAHTERDGGSYYDDMRRSSSWGYDGSSTAGARHLSPSAHHSGPRGDRHSRHSQPRDDGWSPRRESRWDGGGRGHGDYRCSRSPVTDSRRSRSRSRSRSRSPPRAYDHDTTAPSLMSTVHRHVVAASAAVVKDAVVARDTVASHGSSLSQSRADHPLVHASTAEVVHRGDAEEESDASESSDGESREERRRRKKEERRRRKEEKRERKLRRKMERQKAKQDAKRRGRVEDSSANEAADDRPKKKLRRLESDEGGSGGDNGLSQLDSQLLAAFERKKEHAKGASARDRKRAREVSDSDGQSESVTPSDALLNGGKSKTIAVKAKATAKKRKVAVQSDVASVKSGGDDDTPWQNKRAAKKKVAKKSAPVVAVEDSSEGSEWASAGGEKAEQQRSNSKKGPAKRKVPATGNAEADTNNKSAVHAATPATNKKKGTGQKPTPAASGKNTGKGKGTGAPLTAAARRKAIEEEEDFIDVVGADSDVNDRGARGGGKPSVHVTVAPVDPYPRCELPESDPVAVAVSRDLLVAGSASGVRSCLASLFGSLDAEDCALLQDAAAELSVQNAIALSAWRSRRRSGFDSVAASALPIKSEDADAKCLAIGGAVGEFERALVPGCPDALWSECARAEVTAELAMTVDARKGAAAGARGCCRTVPYRKASDFERAQRRKDPAYLVPELFAGAVGYLYSGISAALIVAQQGESAAGGDGQGNGFQQTLGTAGAQSNQDGVSGGVGGQAALSSRRSNRANHRRYVNAITNDLKGSELMQLNTLAARRKNLRFGRSLIHDWGLFTTEGIAANDMVIEYVGEVVRSQVADDREKHYERMGIGSSYLFRLDDDLVIDATRKGGIARFMNHSCEPNCKASIILVDGSKRIVIYAKRDILPGEEITYDYKFPLEDEKIPCFCGAPSCRGTLN* # ORIGINAL: g5612.t1 original gene structure, not modified by PASA NODE_441_length_23728_cov_42.0691 AUGUSTUS gene 17513 20052 . - . ID=g5612;Name=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS mRNA 17513 20052 . - . ID=g5612.t1;Parent=g5612;Name=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 19612 20052 . - . ID=g5612.t1.exon1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 19612 20052 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 19070 19189 . - . ID=g5612.t1.exon2;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 19070 19189 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 18901 18933 . - . ID=g5612.t1.exon3;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 18901 18933 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 18462 18643 . - . ID=g5612.t1.exon4;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 18462 18643 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 18264 18309 . - . ID=g5612.t1.exon5;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 18264 18309 . - 1 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 17889 18026 . - . ID=g5612.t1.exon6;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 17889 18026 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS exon 17513 17686 . - . ID=g5612.t1.exon7;Parent=g5612.t1 NODE_441_length_23728_cov_42.0691 AUGUSTUS CDS 17513 17686 . - 0 ID=cds.g5612.t1;Parent=g5612.t1 #PROT g5612.t1 g5612 MEIMTVTPHCTDVQTLHGVPVTLNAVSQCKFLTESKLLNVAIEQFLGKTVLDIQDVLLQTLEGHLRAITGTLSVEDLYQDREKFAALVREVASPDVGKMGVEILSFTIKDIRDKVGYLEALGKKKTAEIKRDADVGVALAQRDAGVKISEAERSMMDVKFHSESEIANSQRAFTMQRSSFEQEVNTKKAEANLAYELESAKLRQAIRSESVQIQVVERKKQIEVQEHEITRKDNELVATVRKPAEAERFRMETLAHAARTVTVQAGIADAEKIKQMGGAEAASISARGLAEAEGMRIKADAYRKYGDAANTNRVLESLPKLAAEIAAPLGTIDEIIMVNVPSNGWGGNVSNTVIQTMAVLPVAIQAITGTDLTKVRQ* # PASA_UPDATE: g5613.t1, single gene model update, valid-1, status:[pasa:asmbl_7301,status:12],[pasa:asmbl_7302,status:12], valid-1 NODE_441_length_23728_cov_42.0691 . gene 21134 23535 . + . ID=g5613;Name=g5613.t1 NODE_441_length_23728_cov_42.0691 . mRNA 21134 23535 . + . ID=g5613.t1;Parent=g5613;Name=g5613.t1 NODE_441_length_23728_cov_42.0691 . exon 21134 21403 . + . ID=g5613.t1.exon1;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . CDS 21134 21403 . + 0 ID=cds.g5613.t1;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . exon 21525 22887 . + . ID=g5613.t1.exon2;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . CDS 21525 22887 . + 0 ID=cds.g5613.t1;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . exon 23076 23179 . + . ID=g5613.t1.exon3;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . CDS 23076 23179 . + 2 ID=cds.g5613.t1;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . exon 23326 23535 . + . ID=g5613.t1.exon4;Parent=g5613.t1 NODE_441_length_23728_cov_42.0691 . CDS 23326 23535 . + 0 ID=cds.g5613.t1;Parent=g5613.t1 #PROT g5613.t1 g5613 MSYLQSGVASFANTADRRARLNAVESLVNTLTYLEETDENFHRYSLVRDLRRLILETLSPKLEALLAAQEWKDDGHAMVPPVTEELLKSKDYHELVDSLLADTNVAVNRIMGAYSDASLPVEEVDRRLRSLGHRSATVGATIDHDDVSSVHSSVTQNTLDSSFSFLPPFEELPGIVADLAPNRPLDARVGAMGSLEKFSSGDLLAAENWSDILLALCKCLSDVDGYIADQALWFHASLFQAAGSPTAAEIYLSLVAHLSSVFNGTDIALSMRAAAARGSGGGGSPPPRHVSHHADTPLSASKSGVPPQGARLLLSELRPLSSPHNEAVLDTANETTARLMMQIRLLNSFQRALPKYWLRYPEKTMAAVVGETMRLYVPPQGHAHDGTPTVLHLTALVDPRASWLKRWLHTAFSRTHVVRFVRQEMSGLAVHAAWLCLDRRWITETPKLRPAVERSGMLPSGSAVDADNEDTAELAQLSEGLGGNRPDRQLTFAYRASQLSHVCFVHTLSMLSRLLLYAGGRALFPLMLPSKPSLLRDASESIPAELDAPFAMSVSDLLIVMVQLLRIDFRGGDGDRRREGFGDTADDGRGGGPTAPSRGLSPCAIAGEALHDFAASSKACRDILCKVSIRVRACVRACATKCAQILKA* # PASA_UPDATE: g367.t1, single gene model update, valid-1, status:[pasa:asmbl_6560,status:12],[pasa:asmbl_6562,status:12], valid-1 NODE_379_length_25380_cov_42.3923 . gene 5149 9201 . + . ID=g367;Name=g367.t1 NODE_379_length_25380_cov_42.3923 . mRNA 5149 9201 . + . ID=g367.t1;Parent=g367;Name=g367.t1 NODE_379_length_25380_cov_42.3923 . five_prime_UTR 5149 5553 . + . ID=g367.t1.utr5p1;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . five_prime_UTR 5894 6027 . + . ID=g367.t1.utr5p2;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . exon 5149 5553 . + . ID=g367.t1.exon1;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . exon 5894 7436 . + . ID=g367.t1.exon2;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . CDS 6028 7436 . + 0 ID=cds.g367.t1;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . exon 7644 9201 . + . ID=g367.t1.exon3;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . CDS 7644 8754 . + 1 ID=cds.g367.t1;Parent=g367.t1 NODE_379_length_25380_cov_42.3923 . three_prime_UTR 8755 9201 . + . ID=g367.t1.utr3p1;Parent=g367.t1 #PROT g367.t1 g367 MIAPTHSPPPHEAVYAAPSALSSTQDGIISVVHINVDHQRTQPAKQQQRQVANADYMNVDSNADNISSSEAQAGIHLVSLRRGPSFPKASSSSTGGASHQSAVGNNPHPEGALHGLLGGASSNTSTDMNMGPSMQARSENVAASHPGDDSSSPASGTDGSPSPNDSLGAVVRSPINEMAVATVDAPASDAQSIGSPQQKETAGSPGDRPFRCNNCGSSFKLRHHLLRHVRGPRACYLKRQHEDPRTRWEEIMPVVGVKMPTVEGPKLPGASGGEAGAAVPELAPAPTADASAGDGDSEFKCTRCGRAFGQRHHLIRHMQSPYACAFHACSVRRGMSPGSGNKEDAAKKSIKGSMQSAVDSMSGKMTLSAAVTGGRKSAGAGDSKRGKKSGVDSSMTVGGHHGYDMSQLAGMQAMPGLVPGGNAGGPGRVAMGQYDRMPLAGMALPGGVQSQYAGNIYAQRSIQGAEGMDWHRYGEWGVHDNFAFGMQSHPGAPGMYAQMTPRGALAGYAPDVPMGMHMSSHVTGGVRGDMRVRVPGLIPLATSHTQMQPSGAGPHLGPQQQLQIQQMQILQQQQQQQQQQQQQQQQQQQQQQQQQPQQQLLSRMGQQAFAGMQQQTFAGMQQHALPHTQHPGSYGTGGNTGTWPSMDQLVQSQTAGQQPMGHVIHAAGDPSGATPPASAAVAALSMGAGGRYAPAMPPVRFASQPNNAQGTVTGMSPHSGAEGDYAQRLVQQQQQQQQQYQGDAVDGPYVLQSVGSAGVYRGNQQRQFDTYGLPMLGVPGGQSAVSTGAGVTPMQSQGAHHVPEIEADSYAANHGRQQQQQQQQQQQQQWVPGASEHLR* # ORIGINAL: g368.t1 original gene structure, not modified by PASA NODE_379_length_25380_cov_42.3923 AUGUSTUS gene 9712 11628 . - . ID=g368;Name=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS mRNA 9712 11628 . - . ID=g368.t1;Parent=g368;Name=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 11549 11628 . - . ID=g368.t1.exon1;Parent=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 11549 11628 . - 0 ID=cds.g368.t1;Parent=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 10964 11079 . - . ID=g368.t1.exon2;Parent=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 10964 11079 . - 1 ID=cds.g368.t1;Parent=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 9712 10769 . - . ID=g368.t1.exon3;Parent=g368.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 9712 10769 . - 2 ID=cds.g368.t1;Parent=g368.t1 #PROT g368.t1 g368 MKMGAVKARGQLHVVRASLDVPSVPRGLSASPFVSLVTGLDASHIVFGRGNCLYEATVALPVTCAVFDPSSRASHPTDAGAAVITSLDASHTPSPHSLSHVISMPSADSTRRYVAASDMLGHVRLYVANAADASPSGGSHGPLMHVSSIAPPPNTHGEPGLSPCAFFPASTPRLACARHFFRDFSITSEDGRIERIFGLSHAPTSICIGDMGVSSSPLVVVTEGPQASVWDARDPAPVRILSSSAAPLYASATGRGVVVVGGAERTLFAYDPRRWSACGSWQSALKYDVTWAAVSSVDDRVCYAAGGGDSEVAAGTWHPSIPRPERLKTNSAIRASARWAGIALLHDRATATAGGASTDMAGDVMVGLTVAGQAYVIGDALALFNASTPGRPVEVAGQVEQGDVIENAPKRPRIDDD* # PASA_UPDATE: g371.t1, single gene model update, valid-1, status:[pasa:asmbl_6558,status:12], valid-1 NODE_379_length_25380_cov_42.3923 . gene 20310 25270 . - . ID=g371;Name=g371.t1 NODE_379_length_25380_cov_42.3923 . mRNA 20310 25270 . - . ID=g371.t1;Parent=g371;Name=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 25093 25270 . - . ID=g371.t1.exon1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 25093 25270 . - 0 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 24789 24941 . - . ID=g371.t1.exon2;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 24789 24941 . - 2 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 23364 24655 . - . ID=g371.t1.exon3;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 23364 24655 . - 2 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 22979 23027 . - . ID=g371.t1.exon4;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 22979 23027 . - 0 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 22592 22653 . - . ID=g371.t1.exon5;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 22592 22653 . - 2 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 22244 22375 . - . ID=g371.t1.exon6;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 22244 22375 . - 0 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 20880 22016 . - . ID=g371.t1.exon7;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 20880 22016 . - 0 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . exon 20310 20747 . - . ID=g371.t1.exon8;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . CDS 20634 20747 . - 0 ID=cds.g371.t1;Parent=g371.t1 NODE_379_length_25380_cov_42.3923 . three_prime_UTR 20310 20633 . - . ID=g371.t1.utr3p1;Parent=g371.t1 #PROT g371.t1 g371 MKKRILLDEISKGKRTAVAVSDADRKRLVHLDQSASGADKQPESPRAAQLDQKTAGSAPGTPTAGRQRDVVHAKMIGIEAELKIKLRALAALDERLRALGVTFGYVNAAAGKEGKTTETSPATKAEDTTAESPSATHVTVAAEIAVSAAEVTEVLEVTQETQSTEVTEVAEVTQGKPLTEITEVVEVTQEKQSTEVTEVVEVTQEKQLTEVTQEKPLTEVTEGPTDSAVAEATSYVADASSTENTPSTGAASETAADDTPTAHPIVEKYAEVVDAKGGEQGPPEDSDESTGRADSGDAANGEDGDVGDVDDAEESSGSEGEEALAIDRADRVHSTVDEESAAETADTADTFETAEDASDADALLDGTLDETDADDADDADDADDADADDAGGVLARGVLAQPQATEQVQATDAVAGDSPSAANDGTGAVDEDSQVTSESRADALSTAVLAVVTTIVTPPPAEGADSGHVDASHERGERGDVDASPDTVPHVDEDIEMEECCFVADALDDYDAAEAGELSFSAGQSLVVLGMGRDGWWSASLNGSEGLVPSTFLKKSESSKKVTAKGVESEQLTAEQSTAAPIDNAQLWAAEREELRARIGELERQLTLERAQRETELSVLRKELQESARIRAILQFDLNTARDLASRSTLSVMSEEPSGMRVRSQSMDRDKQRKNRLSRQIEAEKLAKVETNRQKDATLPALAADTANTQHAPQHTQHTTHASIGHVTPPPPPASGAQEAHAATDTPVLPLTAVRKNSDGISSATSPGYAPPASPRTGDEGGEDEDGGRIKRNRSMRMGQKIEAERLARKTSDGAQTRDAAMKAADNGVGGDRPRAPSVSSGGVKPSMDAGVARRDSGSGSSLSSSRRASGSSAARRSSSTTSVSANVPTAAAHSQAQTQTQTPSVAPDGSPARRESIPSAVAVGNGASRRESASASSASSSAARRPPKRTLPAFKGKTIPVSPSANVIVMEATEMPVPTRLYSYDELVERPDDVVTAFLEIYLHDDEFVRLFECTKSEFAEMPAWKQVKRKKELNLF* # PASA_UPDATE: g366.t1, single gene model update, valid-1, status:[pasa:asmbl_6559,status:3], valid-1 NODE_379_length_25380_cov_42.3923 . gene 475 2545 . + . ID=g366;Name=g366.t1 NODE_379_length_25380_cov_42.3923 . mRNA 475 2545 . + . ID=g366.t1;Parent=g366;Name=g366.t1 NODE_379_length_25380_cov_42.3923 . five_prime_UTR 475 525 . + . ID=g366.t1.utr5p1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 475 528 . + . ID=g366.t1.exon1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 526 528 . + 0 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 645 767 . + . ID=g366.t1.exon2;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 645 767 . + 0 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 1042 1098 . + . ID=g366.t1.exon3;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 1042 1098 . + 0 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 1359 1401 . + . ID=g366.t1.exon4;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 1359 1401 . + 0 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 1787 1856 . + . ID=g366.t1.exon5;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 1787 1856 . + 2 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . exon 2192 2545 . + . ID=g366.t1.exon6;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . CDS 2192 2336 . + 1 ID=cds.g366.t1;Parent=g366.t1 NODE_379_length_25380_cov_42.3923 . three_prime_UTR 2337 2545 . + . ID=g366.t1.utr3p1;Parent=g366.t1 #PROT g366.t1 g366 MFALRLSRMAVASGPSVSVRSAVSKRMLTTPAGDGLIKEFEKTVKENPVVVFMKGTPDQPMCGFSRAVVQVLNMHGVSSYKFYNVLEDEAVRQGVKQFTNWPTIPQVFINGEFVGGCDIVINLHQSGELKEALAKAGIVSKAENMG* # ORIGINAL: g370.t1 original gene structure, not modified by PASA NODE_379_length_25380_cov_42.3923 AUGUSTUS gene 18622 19712 . - . ID=g370;Name=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS mRNA 18622 19712 . - . ID=g370.t1;Parent=g370;Name=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 19284 19712 . - . ID=g370.t1.exon1;Parent=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 19284 19712 . - 0 ID=cds.g370.t1;Parent=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 18914 19135 . - . ID=g370.t1.exon2;Parent=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 18914 19135 . - 0 ID=cds.g370.t1;Parent=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 18622 18663 . - . ID=g370.t1.exon3;Parent=g370.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 18622 18663 . - 0 ID=cds.g370.t1;Parent=g370.t1 #PROT g370.t1 g370 MSSTDNAEPGSTGGRIHGSEDEGIALLPMRPMTIPLEVTAPREATAQFDSNERDATRDKGKGLFMTGNYDKALSAYESNLAREEASLGPDHPDVATTLCDIGGVYRDGYTNYPLALRMYERALAIRVKAFGPVHPDVAAADEARAWPGRAKNVRSVVNNQSDVLRSAIENRTDERHLGTRRSVSAQRQTSSSAPPVTVLAPDGLPGLRRDPGNAFEFVYFVLALRQKVSL* # ORIGINAL: g369.t1 original gene structure, not modified by PASA NODE_379_length_25380_cov_42.3923 AUGUSTUS gene 12243 17711 . - . ID=g369;Name=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS mRNA 12243 17711 . - . ID=g369.t1;Parent=g369;Name=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 17669 17711 . - . ID=g369.t1.exon1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 17669 17711 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 17383 17412 . - . ID=g369.t1.exon2;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 17383 17412 . - 2 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 16394 17034 . - . ID=g369.t1.exon3;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 16394 17034 . - 2 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 16084 16117 . - . ID=g369.t1.exon4;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 16084 16117 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 15823 15885 . - . ID=g369.t1.exon5;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 15823 15885 . - 2 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 15398 15575 . - . ID=g369.t1.exon6;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 15398 15575 . - 2 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 14998 15127 . - . ID=g369.t1.exon7;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 14998 15127 . - 1 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 14587 14808 . - . ID=g369.t1.exon8;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 14587 14808 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 14237 14382 . - . ID=g369.t1.exon9;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 14237 14382 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 13799 13873 . - . ID=g369.t1.exon10;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 13799 13873 . - 1 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 13536 13632 . - . ID=g369.t1.exon11;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 13536 13632 . - 1 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 13365 13433 . - . ID=g369.t1.exon12;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 13365 13433 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 12994 13199 . - . ID=g369.t1.exon13;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 12994 13199 . - 0 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 12613 12688 . - . ID=g369.t1.exon14;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 12613 12688 . - 1 ID=cds.g369.t1;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS exon 12243 12317 . - . ID=g369.t1.exon15;Parent=g369.t1 NODE_379_length_25380_cov_42.3923 AUGUSTUS CDS 12243 12317 . - 0 ID=cds.g369.t1;Parent=g369.t1 #PROT g369.t1 g369 MPPKRKVDAVADDSAQDAKRAKAEEPVAPRRSSRARPDPPAPAVAPAPVAPQAAGSKRGGRTTKAQKAEPADDAMDVDPPAAAAMATPAPDVPAPAPAKRGRGKNAAAEAPAAASNGDAVAADDKGKGRGKGKGKAAPDASAASVDVSAAVDVPAASNAPATDVTATSKGRGKGKGKAALDAPAAPAVPDAPAAPAPDMKKVTIAFKGSRPVDAHCPGAASKHVYEANGVVYDVMLNQTNIGQNNNKFYVIQLLESDAGNTYFVFTRWGRVGVSGQQSIDSFKSLDSATSAFESKFKDKTANVWANRDSFVKKSGKYDMVHIDYATEEPAAPAEPQDKKPVEIPKSTLPDAVQSFIGFIADVKTMESTMLEMEYDATKAPLGKLTAVQIKNGYESLSRIANIIKHNSGNLMEACSEFYTRIPHNFGHRTPPLIRSEADVKRKQDLLGALGDIQIAMKLFQGDANKLGNPIDNHYASLKCDLVPLSESSPDWSLVTQYMSNTHASTHNSYKLKLLHLFKACRSGEDERFRPDIGNRQLLWHGSRSTNFVGILSTGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCFATGRPTAKGVLLLCEVALGEPHELKQSDSSLPRGLPSGKHSTKGIGRTHPDPSKTITLDDGVRVPLGKGVDSNVDKASLLYNEYIVYDIAQVRIRYVLQAEFDYGRG* # ORIGINAL: g13747.t1 original gene structure, not modified by PASA NODE_10701_length_301_cov_47.6593 AUGUSTUS gene 114 282 . - . ID=g13747;Name=g13747.t1 NODE_10701_length_301_cov_47.6593 AUGUSTUS mRNA 114 282 . - . ID=g13747.t1;Parent=g13747;Name=g13747.t1 NODE_10701_length_301_cov_47.6593 AUGUSTUS exon 114 282 . - . ID=g13747.t1.exon1;Parent=g13747.t1 NODE_10701_length_301_cov_47.6593 AUGUSTUS CDS 114 282 . - 0 ID=cds.g13747.t1;Parent=g13747.t1 #PROT g13747.t1 g13747 MVAQDSFGEHVVKVADFGLSKDLGEKNYFRKNRREKLPVKWMAPETMIYGTFTSAA # PASA_UPDATE: g6230.t1, single gene model update, valid-1, status:[pasa:asmbl_8740,status:12], valid-1 NODE_65_length_46387_cov_40.5857 . gene 27938 31907 . - . ID=g6230;Name=g6230.t1 NODE_65_length_46387_cov_40.5857 . mRNA 27938 31907 . - . ID=g6230.t1;Parent=g6230;Name=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 31752 31907 . - . ID=g6230.t1.exon1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 31752 31907 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 31251 31421 . - . ID=g6230.t1.exon2;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 31251 31421 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 30649 31004 . - . ID=g6230.t1.exon3;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 30649 31004 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 30292 30421 . - . ID=g6230.t1.exon4;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 30292 30421 . - 1 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 30058 30153 . - . ID=g6230.t1.exon5;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 30058 30153 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 28961 29920 . - . ID=g6230.t1.exon6;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 28961 29920 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 28656 28769 . - . ID=g6230.t1.exon7;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 28656 28769 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . exon 27938 28273 . - . ID=g6230.t1.exon8;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . CDS 28106 28273 . - 0 ID=cds.g6230.t1;Parent=g6230.t1 NODE_65_length_46387_cov_40.5857 . three_prime_UTR 27938 28105 . - . ID=g6230.t1.utr3p1;Parent=g6230.t1 #PROT g6230.t1 g6230 MYKDSIPITMMTAHDYPSAFLCDKAGIDTILVGDSLSMVALGYQSTVPCTMEEMLHHSRAVARGARHPFLIGDMPFGSYEESPQIAVRNAIRFLKEGDMKARDPLLTLHAVKLEGGRRVADTVRAITRAGIPVLGHIGLTPQTASSLGGFRVQGRTAKAATELLEDALALQEAGCFAIVIEAVPDKIGEYITRRLDVPTIGIGAGPYTSGQVLVYLDVLGQFDKFVPKFCRQYAKLARPIQDALERYRDDVKARAFPGEANCYSMAEDQYQAFLQAMGEHHVGVTPALSEAQLGQSPGTATKKEGNALKVAVVGAGSMGALIGGRLASHGTPVWLLDPWAEHVTAMKGYGLFIRGLERNERVGANLNVAHVPFGGESEYAAIAAAHHAEGAAAASLASTDTEDEDSIGVPIPDEVPRDFDVAIVLAKGRDTHAAGRVAGKIIAPDGVIFTLQNGLGHAETITLATGGRRTVLRGVVTHGSRIEGAGEIRHTGRGTVHLAAPPGTIPTAVAREGEGDAFVGSDGATPNAEAGSAGSGSGSDHAHSTEQLTPEERRAADVVSRLSILLRECGLGATVTRDFDGFVWSKLVANACINPITALLDCENGFVATDPACEMLVRTVSAEVANVAEAAGIRLSLAIGDPAEHALDVARATAENTSSMLADIRRGSGTEIEQINGAVVSEGKRLGVPTPANETLLNLVRALERRRIVTAGGKRT* # PASA_UPDATE: g6228.t1, single gene model update, valid-1, status:[pasa:asmbl_8734,status:12],[pasa:asmbl_8735,status:12],[pasa:asmbl_8739,status:12], valid-1 NODE_65_length_46387_cov_40.5857 . gene 14749 20479 . - . ID=g6228;Name=g6228.t1 NODE_65_length_46387_cov_40.5857 . mRNA 14749 20479 . - . ID=g6228.t1;Parent=g6228;Name=g6228.t1 NODE_65_length_46387_cov_40.5857 . five_prime_UTR 20007 20479 . - . ID=g6228.t1.utr5p1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 18399 20479 . - . ID=g6228.t1.exon1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 18399 20006 . - 0 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 17350 18162 . - . ID=g6228.t1.exon2;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 17350 18162 . - 0 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 16949 17127 . - . ID=g6228.t1.exon3;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 16949 17127 . - 0 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 16172 16763 . - . ID=g6228.t1.exon4;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 16172 16763 . - 1 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 15635 15835 . - . ID=g6228.t1.exon5;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 15635 15835 . - 0 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . exon 14749 15395 . - . ID=g6228.t1.exon6;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . CDS 15264 15395 . - 0 ID=cds.g6228.t1;Parent=g6228.t1 NODE_65_length_46387_cov_40.5857 . three_prime_UTR 14749 15263 . - . ID=g6228.t1.utr3p1;Parent=g6228.t1 #PROT g6228.t1 g6228 MAEGESDRPLDAPMMHAHTHAHPSTHTTSIDGAGITGDTGDTGERTLDGASGGGAAAGTDAAVHSVIAAEDANSASTPSVLETEGAVGQAPLENDASATDLRRESIESRGEMMSISLVEFQRFQMELVELKAAKYEWGEQQRWLTEELRRKDDDLKKKTEELKRREDETKKRDEDAKKRDEDAKKRDEDAKKRDQRRDEDLKKKDDELKKKDDELKKKADDVKRRDEEIKRRDEEMKKRDEEIKKLKKDVQQVQKDDGKGGGAQKARLDTLLRDYRQLEAEFTSAKATHAEEKGQLRQALKTLGSENDDLKARLSAAESAASLIFAASADDEVGPHTPTRSSPSADGREGGDRGDCGDRMQRTESGFESVALLATPTPTLPATSALAAVAPGPAPPLPSVAETEPSTHGSPDGSVSEVPASQLCDARGRAADEAAAKEEGILVARERQRADEAVACLSGEKRRADEAVAALADALSRLDAARQELEAAVAARDAAAAARASLAEDAADGRVAVEALRSQLSATSTEAALLKADLNSVREELRVRDDELANLNIRLKWTQNKLQAEQEALAHMKAALDKATKRANELREECDGVRANYATVVEALQGTDQTHRDALEALRRETEAASKQQARELADQQDLSALRAKEVDEWRTRHAELLLRHDSTLKDMDAERKSHADARGALADAVAKLNGLQEAMEALQKEAAELRSQADTRHALAEESRALRRELEAARIDASNTAAAEYDARSTLAEVLAEKTHATEAVASLEVRVHALEKQKAAADAEAKRLATELRDAAAKLRAAEYAATALQSELEGQLADAARNLATSVEACERLRADYDHECEQRKISERKSQMALKDLQRQLKQERNRVVELETGLRSPLGSTGSMHSSSFGAFSTDADAANSAYGTSISANGALSSRLGHSRSASDGNSADAASVTAGVSGVSGASGAGPHPLAYPPPRRKGSMLAHGSYADGGLASSSDHVDSAAAQFAMRRGSTDAGNAGGSWETLPVSTGDAAETKALSRRLAQLQKDVKKRDERIKFFEEHTTTLVDDIRRKSKVIQEYAMRDEAGVLAPPMSDAHKMQRSRDRGIMASLFSQRPHDSRMTLELSLEISSKLQSLLEDALLKNMQLQENIDTLGNEIARLQKPSSPSPSQANARTVGSPGAQQSQSQLVT* # ORIGINAL: g6232.t1 original gene structure, not modified by PASA NODE_65_length_46387_cov_40.5857 AUGUSTUS gene 38198 44232 . + . ID=g6232;Name=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS mRNA 38198 44232 . + . ID=g6232.t1;Parent=g6232;Name=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 38198 38525 . + . ID=g6232.t1.exon1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 38198 38525 . + 0 ID=cds.g6232.t1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 39034 39224 . + . ID=g6232.t1.exon2;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 39034 39224 . + 2 ID=cds.g6232.t1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 39354 39455 . + . ID=g6232.t1.exon3;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 39354 39455 . + 0 ID=cds.g6232.t1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 39833 41437 . + . ID=g6232.t1.exon4;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 39833 41437 . + 0 ID=cds.g6232.t1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 41619 42655 . + . ID=g6232.t1.exon5;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 41619 42655 . + 0 ID=cds.g6232.t1;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 42858 44232 . + . ID=g6232.t1.exon6;Parent=g6232.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 42858 44232 . + 1 ID=cds.g6232.t1;Parent=g6232.t1 #PROT g6232.t1 g6232 MLSFVIYRLTRRASLLLSLSIGHIRLTVRDQRRELLSPATSLLSFFSDGTGSGTAVGNVGSDAAFVAGGSGLGHGVLRLASYAETDNSADALSVLAVVCTSAQKSDTIMVRMRRGGLPPRVRLIPLPSRDAHVAALTISPDCQRIATIGDDLSVHVTQVPWPTAQRVPSPTDEPITAAAKPSRTGSVSAAKWWRSAKGTDYVVIASTRGCLYIVDVQMRTLAHTVQLGRGARIVRIHIERDDRLQQRCVLLAVVRAAMTAATEYRCVVLEQSGESLVDAPANVAFQPTLLSVPPNCIDVSLLPTSRGPRIVVLAGDAPSAEDAARAERRGSAAASGGHVQPRVRPCAVSLFDAFLVMHAAFSLDVAEGGGVALPCGGPWYSLCPSPADGVPARLSVLLAHHSPLSRNRLPALLPLQQFPLDDGDILLACRSLGGTPASVARSGTRALEGCVVVTTRGVYECRQLSAPEDIFIDAAVAWSDPFPFGIGLDLDVLSLCRTASDACAGAGDAETAVRLHLQAASPADKGHPDALAARLAASGAVASAVTCVRAVVQAAQQGRQGADPLDRSTAVGGRRELSAVAVAAAGGETLIRRMANLALLCRAYGVLAEAADSHADSALEAWERTAARHAEWFCGSVGDGVGSSRAVATGREFYGLDSEDEEGASPANARELMNLFLRRNYNYHEGDARRLLAAHGMADALVGGCCRSLDKGLEEAAAHGSMRLSRASLIDVLGQRDRNDVLSALSRTALLGSLSPDTQARVVMDHPDAALRCIPLMRALVPLLSRGVLADVVRFADPTRLPLRRLLTGLARDSIGERAAAVELFFLALAQLDSDTKRGHGHVVRHVQYQRPAVDAVKRIRPTVVAVGASHVLAVTTAGHVYAWGEPSGGRLGLGDLVESGGACIPTRLEVLRITGIRVASVACGSEHSLALVEGGAAVLAFGVNDRGQLGLGDRQSRARPTPVASLAGRGVRAVACGGKHSLAIAEDGHVFAWGAGTHGQTALGYGGNADATLPVMPRALHDWVFVQVSGGNAHSACLTSDGRVVTFGETTGREDSALAAPIEGLPPVSHVACGRRFGVAAAEGFLGGVHVWGHFADDEKERSTSRRSLSLTPSPAPKDRTPSSLAAHMASAGAPNSATWTAARVLPMPLDGAVVCVSAGANHGLLTTTSGSVYAFGAGDRGQLGMCDRRRWGSGRALIVQEGERGSIVERTSEVVAAGDDFSVAVDESGAVLAWGRGDRGQLGIPGDCADRLAPSTLPSINLVDRGDGVGPDTEAVDGYGVRPGVADEAASPLHLPSSGASSLSHFAERLGGLYRNHAVMAVCVDAGAWDGAAQACATAGVGDRERGLEFELRAVLADGHSASVDAALGVLCAALDRSVDAASGIVDEAVLASALVAWEVSGLPAAALEGALASPDRLSSVAPVLARLALSAHARQSGRGADTVAGGRREDESDGAAVVGRTLGAFSGRLWSAIACAVARVSAASENVRVDGARAHGAGPFGVAPAPQSRARSVIRNAISELQTAVRVTAVGNTTRLGMGVVH* # PASA_UPDATE: g6225.t1, single gene model update, valid-1, status:[pasa:asmbl_8737,status:3], valid-1 NODE_65_length_46387_cov_40.5857 . gene 715 4741 . - . ID=g6225;Name=g6225.t1 NODE_65_length_46387_cov_40.5857 . mRNA 715 4741 . - . ID=g6225.t1;Parent=g6225;Name=g6225.t1 NODE_65_length_46387_cov_40.5857 . five_prime_UTR 4611 4741 . - . ID=g6225.t1.utr5p1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 4053 4741 . - . ID=g6225.t1.exon1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 4053 4610 . - 0 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 3623 3814 . - . ID=g6225.t1.exon2;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 3623 3814 . - 0 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 3237 3389 . - . ID=g6225.t1.exon3;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 3237 3389 . - 0 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 2883 3000 . - . ID=g6225.t1.exon4;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 2883 3000 . - 0 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 2104 2728 . - . ID=g6225.t1.exon5;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 2104 2728 . - 2 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 1558 1959 . - . ID=g6225.t1.exon6;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 1558 1959 . - 1 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . exon 715 1399 . - . ID=g6225.t1.exon7;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . CDS 892 1399 . - 1 ID=cds.g6225.t1;Parent=g6225.t1 NODE_65_length_46387_cov_40.5857 . three_prime_UTR 715 891 . - . ID=g6225.t1.utr3p1;Parent=g6225.t1 #PROT g6225.t1 g6225 MASADKGDKATQNLYRIPPYFYLHVLDQNKNITRVEIGPKTFIRQDHEKVIYGPEKMITVPPRSYCVVENPVLVDAKGDTVFEESGQAKLRHGDQEIRLARDPFPLYPGENVIGKVTALLVVAANSAFRLRAIRDFDDNGTKYNAGDEWLFEGPGTYIPKVEVEVVETIRATIIKANTALRLRARKDCVDREGTRRVTGEEWTVKRVGAYLPGVYEEVMDIVQAYVLTDKKALHMRALRTFSDDFGNPRKNGEEWLITLSDTESHIPSVNEEVVGVVNITTLTNRHYAVIVDPVGADGKPQLGQKKLIRGEASFFLRPGERLEAGIQNVYVLGDDEGLILRALDTFDEDVAGTKVRRSAGDRWMIRGPVEYVPSVQAEVVQKRKAIPLDENEGIYVRDIKTGKVRAVCGLTYMLNENEELWVKELPPAVDALLTAGRDPLADRGDRSERPTVAKPRDKTSVVTYRVPHNAGVQIYDYKEKKARVIFGPELVMLGPDEQFTQISLSGDKPKRPNVIKTLCLLLGPDFCTDIITIETADHARLQLQLSYNWHFEVDKTNIADAARVFSVPDFVGDACKAIASRVRGAVASVQFDDFHKNSAKIIRASVFGMDEKGKVRDKFVFPSNSLCITSIDIQSVEPVDQRTRDALQKSVQLAIEITTNSQEANARHEAQRLEQEAKGRLERQKITDEAEAEKSRQGLLLLQANSAAVESTGQAKAEALSRAEAARIEGEAAVNQAKLKAEAQRIEAESELERLTRAREAENKFIKEQNDLDIEKTQRLAAIETTKFCDFVSAIGPDTIRAIAVAGPEMQVKLLQGLGIKSTLITDGHNPINLFNTASGLIGAPGLQQQH* # ORIGINAL: g6227.t1 original gene structure, not modified by PASA NODE_65_length_46387_cov_40.5857 AUGUSTUS gene 7765 13927 . + . ID=g6227;Name=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS mRNA 7765 13927 . + . ID=g6227.t1;Parent=g6227;Name=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 7765 7844 . + . ID=g6227.t1.exon1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 7765 7844 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 8035 8161 . + . ID=g6227.t1.exon2;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 8035 8161 . + 1 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 8369 8520 . + . ID=g6227.t1.exon3;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 8369 8520 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 8696 8807 . + . ID=g6227.t1.exon4;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 8696 8807 . + 1 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 8970 9067 . + . ID=g6227.t1.exon5;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 8970 9067 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 9352 9419 . + . ID=g6227.t1.exon6;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 9352 9419 . + 1 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 9570 9637 . + . ID=g6227.t1.exon7;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 9570 9637 . + 2 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 9837 9943 . + . ID=g6227.t1.exon8;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 9837 9943 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 10092 10164 . + . ID=g6227.t1.exon9;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 10092 10164 . + 1 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 10308 10876 . + . ID=g6227.t1.exon10;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 10308 10876 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 11097 11235 . + . ID=g6227.t1.exon11;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 11097 11235 . + 1 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 11568 11897 . + . ID=g6227.t1.exon12;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 11568 11897 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 12053 12505 . + . ID=g6227.t1.exon13;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 12053 12505 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 12708 12851 . + . ID=g6227.t1.exon14;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 12708 12851 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 13142 13562 . + . ID=g6227.t1.exon15;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 13142 13562 . + 0 ID=cds.g6227.t1;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 13752 13927 . + . ID=g6227.t1.exon16;Parent=g6227.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 13752 13927 . + 2 ID=cds.g6227.t1;Parent=g6227.t1 #PROT g6227.t1 g6227 MAPATMKTPRFAHQQGHADIAFDSTGRHVITGGCDGDIRVFKYPMAADDDDAPRSLNAGTEPVYTVAMSENMLVVGSLDNTVRVYRYPDLEFTQLLARFTLPVRHVSVGPKGDMIACCGDEHVIKVASTNDPSLAVVLVGHENSVRSVAYDPRGDYVASSSCDGTVKIWKVSLSAAVKTLNILPRTNSNASPNLCRLSFHPNGNLLAVPVGRDIHLYNREAWALSATMRDDAITQDVSITCFDRTGSFLAAAASDGSIVVWDVMGRAVVSRFKHPQGLRITGLAWAPPSSNAIAWIDARGEVCDWEDVVPLSHLRLRADAAPVHAPSVAGAAQAALPIVNSYKINKTAGDGAAPASARPKRKKVLDSDEDDDDLASATPKRLAGASKAVSLAASRRDAPALMDHSADDALMDDTADDYADADADADLYGYVGASSARSPFPQPALQPGSTPRDQRRHFMAYNATGLITCRDEHTHQQIEIEFHDRMAFRPVSFVDHYRFEIAALGEKGAVFACPESDKSPSTVFFKATDNWAPNSDWTIQLPGGESAVCVAVGEAFVAVATTAGMLRLITCGGVQAAILSLEGTVVAMSGHMGQLLVAANSPDGASLRYTLLDVPAKRRIADGAMPLSPKSRLKWIGFSQEGVPMSYDAKYVLRGLTRDWDFAWTVLCDTMQYKIAQAQQLSAASASADADAPPAAVPVSKDNYWVVGATGSQVMCVTLRLGDMHPPAHTKPVMTVIPMGVPVCLPGTDAGRREEAYLRSVFHYNHSRARMSVDAAARAEAQIDSALLELVQRACKADRNVRALDLCQLLHLQKSYEIAIKVAQMAKQNALAQKIDALRKAKLERDNAESARVHSASHDVPVAALAPPAPPPRNASAATFQTPAVARQQDSAMTANAVHASGAIESPESPSECVRRDRDASDANGNDVDDRLARKPAFDRRRTGGDDAYAVADDAHMRKATKPGIAESLAGTQASQASSIGLAKVPPTPTTPACPPKINPFAKSAARQQPVKVERSLSFFENVQAIAADGAARKGTHK* # PASA_UPDATE: g6229.t1, single gene model update, valid-1, status:[pasa:asmbl_8732,status:3], valid-1 NODE_65_length_46387_cov_40.5857 . gene 21920 27247 . + . ID=g6229;Name=g6229.t1 NODE_65_length_46387_cov_40.5857 . mRNA 21920 27247 . + . ID=g6229.t1;Parent=g6229;Name=g6229.t1 NODE_65_length_46387_cov_40.5857 . five_prime_UTR 21920 22193 . + . ID=g6229.t1.utr5p1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 21920 22331 . + . ID=g6229.t1.exon1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 22194 22331 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 22515 22660 . + . ID=g6229.t1.exon2;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 22515 22660 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 22894 23038 . + . ID=g6229.t1.exon3;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 22894 23038 . + 1 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 23204 23266 . + . ID=g6229.t1.exon4;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 23204 23266 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 23418 23555 . + . ID=g6229.t1.exon5;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 23418 23555 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 23968 24096 . + . ID=g6229.t1.exon6;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 23968 24096 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 24446 24667 . + . ID=g6229.t1.exon7;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 24446 24667 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 24851 25039 . + . ID=g6229.t1.exon8;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 24851 25039 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 25209 25308 . + . ID=g6229.t1.exon9;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 25209 25308 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 25661 25797 . + . ID=g6229.t1.exon10;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 25661 25797 . + 2 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 26221 26301 . + . ID=g6229.t1.exon11;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 26221 26301 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 26498 26648 . + . ID=g6229.t1.exon12;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 26498 26648 . + 0 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . exon 26823 27247 . + . ID=g6229.t1.exon13;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . CDS 26823 27013 . + 2 ID=cds.g6229.t1;Parent=g6229.t1 NODE_65_length_46387_cov_40.5857 . three_prime_UTR 27014 27247 . + . ID=g6229.t1.utr3p1;Parent=g6229.t1 #PROT g6229.t1 g6229 MSTLTVPGAKKTAGGTMRRRAYSQRIQSPQAEQLVRLQAKSQAEYELLEDVRQFVKARAQLDADYAQGLQKLTAQFLTKRKWPGNPKIPSHKECRSGLSAFKSVLEETERMGKQRGIVSEKLLASIAEPIRPQQNQKKQTLKKCIDQHHRLQEELAKSNQEYDKAVKTYTELERVAQMARDKFAEMEERYKKKTLRFFESKSELEKKYNKAMDKVLLCERRAQYARHENILTVSATNAHQSLFYKSFLPNLMDTLDGDFFDRLRDYFTAYGSIEREALNQNLASSIVIVDEGSLVDRHYELQLFLLENAAPFTEPPPLVFLPLETDKITDIVLDENSQPQLTKEMQKLVNTVARINKRILAEEKGMAGLVQMAAVYQKQPEFATAEAQLETEQKIEELQNTIRDLELQKAKTQAKIDKIGLVGIHVEDFSAQQEDEFAETRMRSASMSSGDGLSRSFKARKAVALYEYKAAAADELSIEEDEQLTIIEDQNDGWVKGRNARGQIGIFPASYIEYTEDPVDDEPTTPARSPGSTSSGPALGGASKGKVVALFDYEAQSPEELSFSAGDSIELLSRDTGVDDGWWEGRCHGRRGVFPSLLVEDCEDDEEDF* # PASA_UPDATE: g6226.t1, single gene model update, valid-1, status:[pasa:asmbl_8738,status:3], valid-1 NODE_65_length_46387_cov_40.5857 . gene 5335 7206 . - . ID=g6226;Name=g6226.t1 NODE_65_length_46387_cov_40.5857 . mRNA 5335 7206 . - . ID=g6226.t1;Parent=g6226;Name=g6226.t1 NODE_65_length_46387_cov_40.5857 . five_prime_UTR 7159 7206 . - . ID=g6226.t1.utr5p1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 7129 7206 . - . ID=g6226.t1.exon1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 7129 7158 . - 0 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 6796 6952 . - . ID=g6226.t1.exon2;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 6796 6952 . - 0 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 6516 6661 . - . ID=g6226.t1.exon3;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 6516 6661 . - 2 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 6120 6261 . - . ID=g6226.t1.exon4;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 6120 6261 . - 0 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 5676 5804 . - . ID=g6226.t1.exon5;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 5676 5804 . - 2 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . exon 5335 5555 . - . ID=g6226.t1.exon6;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . CDS 5347 5555 . - 2 ID=cds.g6226.t1;Parent=g6226.t1 NODE_65_length_46387_cov_40.5857 . three_prime_UTR 5335 5346 . - . ID=g6226.t1.utr3p1;Parent=g6226.t1 #PROT g6226.t1 g6226 MADIKKRLPEAASGGTARLVKLGGFHSPVEMQKKYDALVKNARAAAKTRSGVSLGKRVEFSSGSRLARAIAGTGEAKTCGTWQDTESVALIADRMLEDGVVIRGVITNKKGRGRTEVEPLHPSKQTFEGGREAMYIWTFDARSTLNTFLGFLIIAAIIVGCMLPLWPNWMRVAVWYVAATAVSLLGVLAVFLLLRLVAFVAVWAATGGNVFFWILPNFIADVDFLDSFKPWYSTERADTTVDASPAAAAPASGAHGPSPVHGVSASDKSE* # ORIGINAL: g6231.t1 original gene structure, not modified by PASA NODE_65_length_46387_cov_40.5857 AUGUSTUS gene 32955 37106 . + . ID=g6231;Name=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS mRNA 32955 37106 . + . ID=g6231.t1;Parent=g6231;Name=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 32955 33101 . + . ID=g6231.t1.exon1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 32955 33101 . + 0 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 33235 33342 . + . ID=g6231.t1.exon2;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 33235 33342 . + 0 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 33508 34104 . + . ID=g6231.t1.exon3;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 33508 34104 . + 0 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 34298 34406 . + . ID=g6231.t1.exon4;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 34298 34406 . + 0 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 34567 34705 . + . ID=g6231.t1.exon5;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 34567 34705 . + 2 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 35001 35185 . + . ID=g6231.t1.exon6;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 35001 35185 . + 1 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 35447 35664 . + . ID=g6231.t1.exon7;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 35447 35664 . + 2 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 35889 36265 . + . ID=g6231.t1.exon8;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 35889 36265 . + 0 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 36400 36584 . + . ID=g6231.t1.exon9;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 36400 36584 . + 1 ID=cds.g6231.t1;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS exon 36949 37106 . + . ID=g6231.t1.exon10;Parent=g6231.t1 NODE_65_length_46387_cov_40.5857 AUGUSTUS CDS 36949 37106 . + 2 ID=cds.g6231.t1;Parent=g6231.t1 #PROT g6231.t1 g6231 MPFWSRSTASAQEVAGKKAAAGGKGAAAANPFAEYGIEDSDLADAGDAQHDDVDALASAALASANVDDDADVELTEEDMNDPELLSQLKEFGYTSDEGEKKHDSPPAKSRRIDKTPVAHDPDAEAAAELKRLEAGSADDGGDAAGEAEIRALVMLRISEYRAAALGCKAAGDMAGAKQMLLRTRDLQQLAEDANSGLPIDTARIPGPPPAPVTPAPAPASAPAQLPSKQSLQPGTAPARTPSPQTAPAARGSKSSPVVAAKSAKETRGSVAAGIEDELEREVAKRAPLLAAGGDVYDRLEAALQHQADSCQEKAKDYYGRGEKEAAVKYYMEKKKALQDIDSIRTARAHGDPPPRFRYEDRVQSVTRTFSNLHDEELELVIVAANNVKPPAGVAPKDLELIVQYELAFPNADAPQKGATRVVKGTPHPEYDSTHKLQIERRKAPQDRFVKFMKKKRGVITLDVIHQKKSGFGFIQKDVSVGRAEIALEPLATVAESRQTVEICEGKKQTGGKVSVILRVRDPLLCKDVQSVTERWVVLEGYGSSPQPAQQQQQQQQPLRQEPQQPRVHTPVPAELPVPPQTPQTPQTPQTPQTKAPAQEAKSVSSAKAAAAPSHAPDDDDDLDDPDSVDNMDSNNVLEQEMEAVTAKIGALQAARKPPPEDLVDRKQQIELKLQLLVIQVQTGQLTMDGYLGRVRARIIADKKLALRLRDKGRVDDAKLVMNRIKTMQKEVEEAEAAADE* # PASA_UPDATE: g6224.t1, single gene model update, valid-1, status:[pasa:asmbl_8733,status:12], valid-1 NODE_65_length_46387_cov_40.5857 . gene 348 696 . + . ID=g6224;Name=g6224.t1 NODE_65_length_46387_cov_40.5857 . mRNA 348 696 . + . ID=g6224.t1;Parent=g6224;Name=g6224.t1 NODE_65_length_46387_cov_40.5857 . five_prime_UTR 348 348 . + . ID=g6224.t1.utr5p1;Parent=g6224.t1 NODE_65_length_46387_cov_40.5857 . exon 348 696 . + . ID=g6224.t1.exon1;Parent=g6224.t1 NODE_65_length_46387_cov_40.5857 . CDS 349 597 . + 0 ID=cds.g6224.t1;Parent=g6224.t1;5_prime_partial=true NODE_65_length_46387_cov_40.5857 . three_prime_UTR 598 696 . + . ID=g6224.t1.utr3p1;Parent=g6224.t1 #PROT g6224.t1 g6224 HMELRRLKLKQDQEHALRTRRAFATGDSWRLKPPDAQPFHFATSNLDSANRPRLAKVLSEQEDAECTFQPNAWRPPGSSIPM* # ORIGINAL: g2726.t1 original gene structure, not modified by PASA NODE_14360_length_250_cov_81.76_potentialcontaminant AUGUSTUS gene 2 250 . + . ID=g2726;Name=g2726.t1 NODE_14360_length_250_cov_81.76_potentialcontaminant AUGUSTUS mRNA 2 250 . + . ID=g2726.t1;Parent=g2726;Name=g2726.t1 NODE_14360_length_250_cov_81.76_potentialcontaminant AUGUSTUS exon 2 250 . + . ID=g2726.t1.exon1;Parent=g2726.t1 NODE_14360_length_250_cov_81.76_potentialcontaminant AUGUSTUS CDS 2 250 . + 2 ID=cds.g2726.t1;Parent=g2726.t1 #PROT g2726.t1 g2726 GAAEAALESARTTLAERESEIARVSNEASMVASERDAATAELARVRESLETLEAQRQGLENELEGLRGLIVEKDRAVSDAQS # ORIGINAL: g13077.t1 original gene structure, not modified by PASA NODE_1085_length_14081_cov_47.1487 AUGUSTUS gene 10633 12168 . - . ID=g13077;Name=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS mRNA 10633 12168 . - . ID=g13077.t1;Parent=g13077;Name=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 12165 12168 . - . ID=g13077.t1.exon1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 12165 12168 . - 0 ID=cds.g13077.t1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 11926 12068 . - . ID=g13077.t1.exon2;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 11926 12068 . - 2 ID=cds.g13077.t1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 11601 11739 . - . ID=g13077.t1.exon3;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 11601 11739 . - 0 ID=cds.g13077.t1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 11339 11479 . - . ID=g13077.t1.exon4;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 11339 11479 . - 2 ID=cds.g13077.t1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 10971 11179 . - . ID=g13077.t1.exon5;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 10971 11179 . - 2 ID=cds.g13077.t1;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 10633 10755 . - . ID=g13077.t1.exon6;Parent=g13077.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 10633 10755 . - 0 ID=cds.g13077.t1;Parent=g13077.t1 #PROT g13077.t1 g13077 MAYAHSSLEADFANAAKVIAGDVGALRGLVDHTALKQTCTRADIRTLAEEGHKHGFRSVCVPPSLIATADETLRDHRSSTVVCTVISFPNGYCTTASKVAEVKDAISRGCTEIDFVQNVGLVKEGLWDEVATEYSEVVTAAEGRLVKVILETAFLTSDEIARCAYIGAKSGIAVIKTSTGFASRGASLDDIKHIREGLAKAEAESPIKCGIKASGGVKDLATAIQYISAGATRIGTSSGIAIISGATSTAAY* # PASA_UPDATE: g13075.t1, single gene model update, valid-1, status:[pasa:asmbl_323,status:12],[pasa:asmbl_324,status:12],[pasa:asmbl_325,status:12], valid-1 NODE_1085_length_14081_cov_47.1487 . gene 3063 5409 . - . ID=g13075;Name=g13075.t1 NODE_1085_length_14081_cov_47.1487 . mRNA 3063 5409 . - . ID=g13075.t1;Parent=g13075;Name=g13075.t1 NODE_1085_length_14081_cov_47.1487 . five_prime_UTR 5211 5409 . - . ID=g13075.t1.utr5p1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . exon 5151 5409 . - . ID=g13075.t1.exon1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . CDS 5151 5210 . - 0 ID=cds.g13075.t1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . exon 4185 4970 . - . ID=g13075.t1.exon2;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . CDS 4185 4970 . - 0 ID=cds.g13075.t1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . exon 3926 4052 . - . ID=g13075.t1.exon3;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . CDS 3926 4052 . - 0 ID=cds.g13075.t1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . exon 3063 3821 . - . ID=g13075.t1.exon4;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . CDS 3226 3821 . - 2 ID=cds.g13075.t1;Parent=g13075.t1 NODE_1085_length_14081_cov_47.1487 . three_prime_UTR 3063 3225 . - . ID=g13075.t1.utr3p1;Parent=g13075.t1 #PROT g13075.t1 g13075 MEDKVAKKYLVDKHIPQLFESLMSGLMFHRPDDPIAYLETCLAKAKEQRGQPVQWDLFIGDARKTRAAGDAPADVKPSTSRPRTPDDKRPVLPPIATAQTKTPVEAAVGKYDDSLRDARVVFVLGGPGSGKGTQCERIVKEFGFTHLSTGDLLRAEVTSGSPLGANIKAIMEKGDLVPLDVTLSLLRNAMLKAKSTAKGFLIDGFPREIAQAHAFEEKIANCEIVLYFECSEATMEKRLIKRGETSGRADDNAESIKKRFRTFLDISLPVIKHYEAQGKARKVSSEVAPEEVYENVRRVFNPSLPAVEPKADPRLANTRVIFVLGGPGCGKGTQCERIIAKYGLKHLSAGDLLREEVARGSSQGQMIADLMKNGQIVPQEVTIRLLRDAMSREYTDKGFLIDGFPREIGQALTFEKMVTKCEFVLYFECSEATMEKRLIKRGETSGRADDNAETIRKRFRTFLEVSLPVIKHYEAEGKVHTISAEDAPDVVFSHVENVFDSSSAPADDEEPLALSSTADDLD* # ORIGINAL: g13073.t1 original gene structure, not modified by PASA NODE_1085_length_14081_cov_47.1487 AUGUSTUS gene 66 1223 . - . ID=g13073;Name=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS mRNA 66 1223 . - . ID=g13073.t1;Parent=g13073;Name=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 1175 1223 . - . ID=g13073.t1.exon1;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 1175 1223 . - 0 ID=cds.g13073.t1;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 937 1082 . - . ID=g13073.t1.exon2;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 937 1082 . - 2 ID=cds.g13073.t1;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 705 826 . - . ID=g13073.t1.exon3;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 705 826 . - 0 ID=cds.g13073.t1;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 412 586 . - . ID=g13073.t1.exon4;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 412 586 . - 1 ID=cds.g13073.t1;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 66 190 . - . ID=g13073.t1.exon5;Parent=g13073.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 66 190 . - 0 ID=cds.g13073.t1;Parent=g13073.t1 #PROT g13073.t1 g13073 MADTDAVQKGHHGRQAGPKADRKKERDKKKRGVEEPSEKGRNPKAFTSFSFVKRDKAVRRNLDKETKKHHVPAIDRTPLEPPPVVIAVVGPPQVGKTTVIKSLIKRYTNQNIGDIRGPVTVVAGKNKRLTFIEATNDLNSMIDVAKVADLVLLLVDASFGFEMETFEFLNVLQVHGFPKIMGVLTHLDLFKNNKKLRKTKKRLKT # ORIGINAL: g13078.t1 original gene structure, not modified by PASA NODE_1085_length_14081_cov_47.1487 AUGUSTUS gene 13129 13884 . + . ID=g13078;Name=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS mRNA 13129 13884 . + . ID=g13078.t1;Parent=g13078;Name=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 13129 13279 . + . ID=g13078.t1.exon1;Parent=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 13129 13279 . + 0 ID=cds.g13078.t1;Parent=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 13540 13699 . + . ID=g13078.t1.exon2;Parent=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 13540 13699 . + 2 ID=cds.g13078.t1;Parent=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 13872 13884 . + . ID=g13078.t1.exon3;Parent=g13078.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 13872 13884 . + 1 ID=cds.g13078.t1;Parent=g13078.t1 #PROT g13078.t1 g13078 MSFQSSFYKGASADVAVAVMPRGPHGFVAAKPMETGGGAKKKHAGKSILAGGIAGGIEICCTYPTEYVKTQLQLDERSATPRFKGPIHVVKLTLNEHGFLGLYRCGY* # ORIGINAL: g13076.t1 original gene structure, not modified by PASA NODE_1085_length_14081_cov_47.1487 AUGUSTUS gene 5857 10447 . + . ID=g13076;Name=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS mRNA 5857 10447 . + . ID=g13076.t1;Parent=g13076;Name=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 5857 6796 . + . ID=g13076.t1.exon1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 5857 6796 . + 0 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 6952 7230 . + . ID=g13076.t1.exon2;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 6952 7230 . + 2 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 7419 7614 . + . ID=g13076.t1.exon3;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 7419 7614 . + 2 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 7949 8082 . + . ID=g13076.t1.exon4;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 7949 8082 . + 1 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 8336 8499 . + . ID=g13076.t1.exon5;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 8336 8499 . + 2 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 8819 8959 . + . ID=g13076.t1.exon6;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 8819 8959 . + 0 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 9138 9867 . + . ID=g13076.t1.exon7;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 9138 9867 . + 0 ID=cds.g13076.t1;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 10047 10447 . + . ID=g13076.t1.exon8;Parent=g13076.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 10047 10447 . + 2 ID=cds.g13076.t1;Parent=g13076.t1 #PROT g13076.t1 g13076 MDSDPPTLVRLALTRIEEASSRQKESSLTRFRVQPPPKGHANAALFDAAHTGDTQFLINVIKRPGKDSDSKEKTNVGSTSEGSIHDVSIDLNARDAAGATPLMYAAVAGHTAFVSALVIAGADVNAQDDLYKRTAAHWAVQHGKADTFECLVGNGAKIDARDSFGKTPVHIATDIDSTACLKVVVEAAGRSGVKGLLNATDVDGLTPLSIACVNTRLDHLRILLLSSGVDVLADDDQGRSALQWAACSPSSECLVLLLETMSTHVNKGDARGYTPLHMAAMSSRVDATDKLLAAGANPHATDKNGATALHWATSEGCVAIMEILIAHGARIDATDAMGAEPLHYAAQKNHQEAAALLIDRGASLDCEDFFGRRPLVWSVVTGDANMCAYLLEKGASIGAKDANGSCALHYAAHKGHADCCRTLLASRANANAVDLNRQTPLIYAAQAGHAAALDELLLSKPIVGGKDSEGKTALHWACARGHVACAESLIASGAVVDAGDAAGNTPLHEASRYGKEAIVPLLASTPGLVMRPNADGLHPLHLAASGGHVEACAALLQFGANVLAADGDAQKPLTPTDYAQRAGHAACTHFLRRQGGHTRDALLNRSARRIQRSWREHRSRSSKQLLEEKAAVRIQSVYRGYSTRARLRKLKTDQETADAQHVQEMSVVEERLERLASKLEEHEMSDEDADRERSTSRANLCSPSRAASAKSSRMHLHSRAASATSRHSKGSSNGRTDAAALQEGGALPANTQDELNDKALDDLIARLDEMDGVTAFGAAESHATWLERKKREKRQFLRHMIKEWECSRGRRQTGEMLAWMYREQRANVYRQWLEQRDEELRQRKERKAESKRIVDKAMKERTMGVRHSRQLLPYRTEPNRLPSEALRTSSGVPVTLTVEEQRALALFAATPEYAYVAQLVAPLMKKEKERANTDSLKSNKLPSAAPTSKRRPEDMMSRRRSSKSLFATASSTASLKLPSVSDNAQLDNRSLGTT* # ORIGINAL: g13074.t1 original gene structure, not modified by PASA NODE_1085_length_14081_cov_47.1487 AUGUSTUS gene 1953 2873 . + . ID=g13074;Name=g13074.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS mRNA 1953 2873 . + . ID=g13074.t1;Parent=g13074;Name=g13074.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS exon 1953 2873 . + . ID=g13074.t1.exon1;Parent=g13074.t1 NODE_1085_length_14081_cov_47.1487 AUGUSTUS CDS 1953 2873 . + 0 ID=cds.g13074.t1;Parent=g13074.t1 #PROT g13074.t1 g13074 MAAARLAEVPRIMERRLNCLTCIDSPLDMLDTRTVCVALGLVGLLSHVLSEYIVPTAEPTATFVVGSLVLFVTYYALDFVLGRYLAAYARISNVDKRFYVLANLIKSVLLAAMTPQALSLLHSTLYLDQWNNTHIKNMGSLYAITDFVSLFLARGRMKWTTIAHHITVLVFNAFSIRNDYSNHNICRAIMIYAIFSAQAYLVNALLASRFLQVSRKASTVLSYCSAVIYISSCALNWLWQAQYIRHLMESHSHWTVYMYVALLGFIVWDDLVLNRWLLQNAKNPESDNPSKTPKEGNAVANSKKDE* # PASA_UPDATE: g11120.t1, single gene model update, valid-1, status:[pasa:asmbl_2990,status:12], valid-1 NODE_1910_length_8613_cov_140.783 . gene 7344 8341 . + . ID=g11120;Name=g11120.t1 NODE_1910_length_8613_cov_140.783 . mRNA 7344 8341 . + . ID=g11120.t1;Parent=g11120;Name=g11120.t1 NODE_1910_length_8613_cov_140.783 . exon 7344 7768 . + . ID=g11120.t1.exon1;Parent=g11120.t1 NODE_1910_length_8613_cov_140.783 . CDS 7344 7757 . + 0 ID=cds.g11120.t1;Parent=g11120.t1 NODE_1910_length_8613_cov_140.783 . exon 8207 8341 . + . ID=g11120.t1.exon2;Parent=g11120.t1 NODE_1910_length_8613_cov_140.783 . three_prime_UTR 7758 7768 . + . ID=g11120.t1.utr3p1;Parent=g11120.t1 NODE_1910_length_8613_cov_140.783 . three_prime_UTR 8207 8341 . + . ID=g11120.t1.utr3p2;Parent=g11120.t1 #PROT g11120.t1 g11120 MDNQQLGGPAEKEKVYKLKMVASHIGVSLTSGHFVSTVEHNGHYFRCNDSEVSDISERAMLQGIETMETPYLYLYLLDHSTPTAIAPDESDSALMQPHKVARQDAHSHVHDSPALPRSPSPSPQPRMVLRRRPNKNI* # ORIGINAL: g11119.t1 original gene structure, not modified by PASA NODE_1910_length_8613_cov_140.783 AUGUSTUS gene 352 2365 . + . ID=g11119;Name=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS mRNA 352 2365 . + . ID=g11119.t1;Parent=g11119;Name=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 352 530 . + . ID=g11119.t1.exon1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 352 530 . + 2 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 815 913 . + . ID=g11119.t1.exon2;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 815 913 . + 0 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 1080 1186 . + . ID=g11119.t1.exon3;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 1080 1186 . + 0 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 1339 1380 . + . ID=g11119.t1.exon4;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 1339 1380 . + 1 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 1755 1839 . + . ID=g11119.t1.exon5;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 1755 1839 . + 1 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 2114 2140 . + . ID=g11119.t1.exon6;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 2114 2140 . + 0 ID=cds.g11119.t1;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS exon 2324 2365 . + . ID=g11119.t1.exon7;Parent=g11119.t1 NODE_1910_length_8613_cov_140.783 AUGUSTUS CDS 2324 2365 . + 0 ID=cds.g11119.t1;Parent=g11119.t1 #PROT g11119.t1 g11119 AANDPFVQRKSQGPSLNSRALALAEKIAVATTRATMEFLTPGAHTDRRNMDMDMDMQIEDSDVCAPQLSADEESDLSVSAGGTDWDNADQDAGNNENFDIFLNGDVKFTWAKGEEPPDWSSNAGWVWRHVTSCTSKLQKSVRTRPAPSELQVFEQTVLAQGGTAKPKQLTYHSMAMMFMVLIEIMRSGRWLC* # ORIGINAL: g2873.t1 original gene structure, not modified by PASA NODE_7831_length_404_cov_31.2401_potentialcontaminant AUGUSTUS gene 42 346 . - . ID=g2873;Name=g2873.t1 NODE_7831_length_404_cov_31.2401_potentialcontaminant AUGUSTUS mRNA 42 346 . - . ID=g2873.t1;Parent=g2873;Name=g2873.t1 NODE_7831_length_404_cov_31.2401_potentialcontaminant AUGUSTUS exon 42 346 . - . ID=g2873.t1.exon1;Parent=g2873.t1 NODE_7831_length_404_cov_31.2401_potentialcontaminant AUGUSTUS CDS 42 346 . - 0 ID=cds.g2873.t1;Parent=g2873.t1 #PROT g2873.t1 g2873 MLVNPSDGLEAAGEMYPGRVEVVSLSSTNEYAADFMKDCKASDRRFEILLKWLAKNHGRFRYVMSIDSRDYLFLSDPLAQLVKILDQGGYQDADFVSSVGE # ORIGINAL: g3677.t1 original gene structure, not modified by PASA NODE_1759_length_9356_cov_36.9271 AUGUSTUS gene 3456 4199 . - . ID=g3677;Name=g3677.t1 NODE_1759_length_9356_cov_36.9271 AUGUSTUS mRNA 3456 4199 . - . ID=g3677.t1;Parent=g3677;Name=g3677.t1 NODE_1759_length_9356_cov_36.9271 AUGUSTUS exon 3456 4199 . - . ID=g3677.t1.exon1;Parent=g3677.t1 NODE_1759_length_9356_cov_36.9271 AUGUSTUS CDS 3456 4199 . - 0 ID=cds.g3677.t1;Parent=g3677.t1 #PROT g3677.t1 g3677 MGAALCTGADAVPTVDPPMGHNSIEPITSQDAYESRDIASTVIEPTMLGRKRSSFLRRHPSAAAMSASVGDVHSVEGAVGRKVSVLDGERNFEKDVIRCLRPKYYKPGEFIVVEGAVGSEMYFIKSGRAEVCSRDGNDVYASLHAGQFFGEIAVLFPVTRTASVRAGTPILVNVLRKDDLDTLLGNYPAIRERFNLVAQQRLVSIEKTKATNAKDALSRHVLLGNTMSVKGNEVRRMPHCVEEGYAD* # PASA_UPDATE: g3679.t1, single gene model update, valid-1, status:[pasa:asmbl_2542,status:3], valid-1 NODE_1759_length_9356_cov_36.9271 . gene 6782 9328 . - . ID=g3679;Name=g3679.t1 NODE_1759_length_9356_cov_36.9271 . mRNA 6782 9328 . - . ID=g3679.t1;Parent=g3679;Name=g3679.t1 NODE_1759_length_9356_cov_36.9271 . five_prime_UTR 9153 9328 . - . ID=g3679.t1.utr5p1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . exon 8952 9328 . - . ID=g3679.t1.exon1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . CDS 8952 9152 . - 0 ID=cds.g3679.t1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . exon 8365 8553 . - . ID=g3679.t1.exon2;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . CDS 8365 8553 . - 0 ID=cds.g3679.t1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . exon 7972 8082 . - . ID=g3679.t1.exon3;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . CDS 7972 8082 . - 0 ID=cds.g3679.t1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . exon 7547 7684 . - . ID=g3679.t1.exon4;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . CDS 7547 7684 . - 0 ID=cds.g3679.t1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . exon 6782 7328 . - . ID=g3679.t1.exon5;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . CDS 6888 7328 . - 0 ID=cds.g3679.t1;Parent=g3679.t1 NODE_1759_length_9356_cov_36.9271 . three_prime_UTR 6782 6887 . - . ID=g3679.t1.utr3p1;Parent=g3679.t1 #PROT g3679.t1 g3679 MDAKETPSWQYWPDDPHFSSFLAGIFVGQAFLVACVLVLVYLFLLREPTKGARKPLAPGVVRTAGRQSTPFTAKTSGQLASDASLLESCEWLNAIVARVWGELRQSDALVAFLTHAVDEAFNPPGKPSFVGHIVVRDLSIGEVLPTIDGVSISVGGSNGDKPSDMELSVFFDVSYNGPLSLAIDTELVLNWPAQRLAALPISLAVSLLGFGGKFRLHCPHPTDGAPTAFSLALLAEPSVSLEVSSSLGAASKVRDLPKLRDILTSRLYEGIARALVSPSCISIPAIEGVLNVLRQASRNEANGESQKGSASQESNPGSSALGGKEGAVIGLVDTESPLRQRWMGRVTPLTRGSAHAPAQ* # PASA_UPDATE: g3676.t1, single gene model update, valid-1, status:[pasa:asmbl_2541,status:12], valid-1 NODE_1759_length_9356_cov_36.9271 . gene 1410 2663 . - . ID=g3676;Name=g3676.t1 NODE_1759_length_9356_cov_36.9271 . mRNA 1410 2663 . - . ID=g3676.t1;Parent=g3676;Name=g3676.t1 NODE_1759_length_9356_cov_36.9271 . five_prime_UTR 2606 2663 . - . ID=g3676.t1.utr5p1;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . exon 2475 2663 . - . ID=g3676.t1.exon1;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . CDS 2475 2605 . - 0 ID=cds.g3676.t1;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . exon 1949 2236 . - . ID=g3676.t1.exon2;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . CDS 1949 2236 . - 1 ID=cds.g3676.t1;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . exon 1410 1721 . - . ID=g3676.t1.exon3;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . CDS 1430 1721 . - 1 ID=cds.g3676.t1;Parent=g3676.t1 NODE_1759_length_9356_cov_36.9271 . three_prime_UTR 1410 1429 . - . ID=g3676.t1.utr3p1;Parent=g3676.t1 #PROT g3676.t1 g3676 MEYRKRDPSFPDDHPRNLIPELCHAFYHMGWVTGTGGGMSIRSGKEIYIAPSGVQKDRMAPVDLFVCDDDGNDISVPGNAKLRKSQCTPLFFNAYKMCGAGAVIHTHSQNAVIATLLYDKEFRITHQEMIKGIRRCGTNTFHKYYDELVIPIIENTAEERDLTTYMADAIRAYPQTCCVLVRRHGLYVWGETWEEAKTMCECYDYLLEIAIKMRQLGLDPAQTPANALPEASKPCC* # PASA_UPDATE: g3678.t1, single gene model update, valid-1, status:[pasa:asmbl_2540,status:3], valid-1 NODE_1759_length_9356_cov_36.9271 . gene 4866 6511 . + . ID=g3678;Name=g3678.t1 NODE_1759_length_9356_cov_36.9271 . mRNA 4866 6511 . + . ID=g3678.t1;Parent=g3678;Name=g3678.t1 NODE_1759_length_9356_cov_36.9271 . five_prime_UTR 4866 5136 . + . ID=g3678.t1.utr5p1;Parent=g3678.t1 NODE_1759_length_9356_cov_36.9271 . exon 4866 5295 . + . ID=g3678.t1.exon1;Parent=g3678.t1 NODE_1759_length_9356_cov_36.9271 . CDS 5137 5295 . + 0 ID=cds.g3678.t1;Parent=g3678.t1 NODE_1759_length_9356_cov_36.9271 . exon 5445 6511 . + . ID=g3678.t1.exon2;Parent=g3678.t1 NODE_1759_length_9356_cov_36.9271 . CDS 5445 6179 . + 0 ID=cds.g3678.t1;Parent=g3678.t1 NODE_1759_length_9356_cov_36.9271 . three_prime_UTR 6180 6511 . + . ID=g3678.t1.utr3p1;Parent=g3678.t1 #PROT g3678.t1 g3678 MRLEEGTFERCTNQVGGHKPEEGKGKGLLVADGVVLKPLQSKGRGAKERVFYEEVCSSANSAAIAPLVRFLPRFHGVSHIAGDDGHVTEYIRLEDVSAKFRRPCVLDIKMGQRTYGEDASAEKIAYEVAKYPPQTELGFRFTGMHVYDATRGEYRSLGRKYGHGLSVANVIDGFVAYLDNGKGVRRDVIPGILSRLYEIRAWFAEQSVYRFYSSSLLFVYEGDGFSSDVDVRCIDFAHVYPICDGGKDEGYVHGIDRVIRLFASLLDGEGGNVADMAGVVAAQDVVPAAATVLAECA* # PASA_UPDATE: g2990.t1, single gene model update, valid-1, status:[pasa:asmbl_8832,status:12], valid-1 NODE_6790_length_510_cov_125.37_potentialcontaminant . gene 4 481 . - . ID=g2990;Name=g2990.t1 NODE_6790_length_510_cov_125.37_potentialcontaminant . mRNA 4 481 . - . ID=g2990.t1;Parent=g2990;Name=g2990.t1 NODE_6790_length_510_cov_125.37_potentialcontaminant . exon 4 481 . - . ID=g2990.t1.exon1;Parent=g2990.t1 NODE_6790_length_510_cov_125.37_potentialcontaminant . CDS 4 481 . - 0 ID=cds.g2990.t1;Parent=g2990.t1;3_prime_partial=true #PROT g2990.t1 g2990 MNDELRANFPYSASRSGASTGCYDFAEVSGCRLSEGNRPTYLGTNEGPQSVTYFVRWTTDYVLPRLAPGSLHFMSVVGGMNGLNVAVNFAPTSITFFDFGASPQICVGRLFLEVLKMSNSRADFVTAMFGRDFAKFVSEDPEGEMTVTSQVRYLMQPVD # PASA_UPDATE: g2831.t1, single gene model update, valid-1, status:[pasa:asmbl_8969,status:12], valid-1 NODE_7041_length_477_cov_64.2562_potentialcontaminant . gene 4 458 . - . ID=g2831;Name=g2831.t1 NODE_7041_length_477_cov_64.2562_potentialcontaminant . mRNA 4 458 . - . ID=g2831.t1;Parent=g2831;Name=g2831.t1 NODE_7041_length_477_cov_64.2562_potentialcontaminant . exon 4 458 . - . ID=g2831.t1.exon1;Parent=g2831.t1 NODE_7041_length_477_cov_64.2562_potentialcontaminant . CDS 4 458 . - 0 ID=cds.g2831.t1;Parent=g2831.t1;5_prime_partial=true;3_prime_partial=true #PROT g2831.t1 g2831 VASISATSAAVRASATSVASALNYAASVRSVASASATSAAVRASATSVASALNFAASVRSVASISATSAAVRASATSVASALNYAASVRSVASISATSAAVRASATSVASALNFAASVRSVASISATSAAVRASATSVASALNYAASVRSV # ORIGINAL: g9903.t1 original gene structure, not modified by PASA NODE_5408_length_866_cov_30.0227 AUGUSTUS gene 82 866 . + . ID=g9903;Name=g9903.t1 NODE_5408_length_866_cov_30.0227 AUGUSTUS mRNA 82 866 . + . ID=g9903.t1;Parent=g9903;Name=g9903.t1 NODE_5408_length_866_cov_30.0227 AUGUSTUS exon 82 866 . + . ID=g9903.t1.exon1;Parent=g9903.t1 NODE_5408_length_866_cov_30.0227 AUGUSTUS CDS 82 866 . + 1 ID=cds.g9903.t1;Parent=g9903.t1 #PROT g9903.t1 g9903 YMDIKRNPNLYESIDCVARNNIITNVGGAGIGLYASFRPVVVHNTLWSVAENMQSGILINAVDHWISPTQWPAIGSRDITIQNNIIVKSLNGYKSPLLQIRQHVKVDNASVITPGLTGFMRMSNNIWHIVGDGPVVGEFRWGHGVMLEDERADSIFVGNLTGFNAHMGLLDDTASVEADPMLDSIFRPASCSPAIGRADASNASHVFDDYDGRPREGHLDIGAKLFAGSLSPKPFPPIAVRVVVWSQMNVYMFVCALGWVG # ORIGINAL: g3009.t1 original gene structure, not modified by PASA NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS gene 43 375 . + . ID=g3009;Name=g3009.t1 NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS mRNA 43 375 . + . ID=g3009.t1;Parent=g3009;Name=g3009.t1 NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS exon 43 239 . + . ID=g3009.t1.exon1;Parent=g3009.t1 NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS CDS 43 239 . + 2 ID=cds.g3009.t1;Parent=g3009.t1 NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS exon 334 375 . + . ID=g3009.t1.exon2;Parent=g3009.t1 NODE_6267_length_603_cov_105.14_potentialcontaminant AUGUSTUS CDS 334 375 . + 0 ID=cds.g3009.t1;Parent=g3009.t1 #PROT g3009.t1 g3009 EEKSDARQLTAAALELTSKFVSLSPIYFGRVQFLLAYAMAGDSIQFYIISQRPTAAGSPQVVLKESVVGLPWLVSVDS* # PASA_UPDATE: g8142.t1, single gene model update, valid-1, status:[pasa:asmbl_7474,status:12], valid-1 NODE_4612_length_1405_cov_33.4594 . gene 118 1227 . + . ID=g8142;Name=g8142.t1 NODE_4612_length_1405_cov_33.4594 . mRNA 118 1227 . + . ID=g8142.t1;Parent=g8142;Name=g8142.t1 NODE_4612_length_1405_cov_33.4594 . exon 118 261 . + . ID=g8142.t1.exon1;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . CDS 118 261 . + 0 ID=cds.g8142.t1;Parent=g8142.t1;5_prime_partial=true NODE_4612_length_1405_cov_33.4594 . exon 409 484 . + . ID=g8142.t1.exon2;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . CDS 409 484 . + 0 ID=cds.g8142.t1;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . exon 641 749 . + . ID=g8142.t1.exon3;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . CDS 641 749 . + 2 ID=cds.g8142.t1;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . exon 1116 1227 . + . ID=g8142.t1.exon4;Parent=g8142.t1 NODE_4612_length_1405_cov_33.4594 . CDS 1116 1227 . + 1 ID=cds.g8142.t1;Parent=g8142.t1 #PROT g8142.t1 g8142 SRPTQYGGRHTVTLIPGDGVGPELATIVQTIFKHANVPVEFERIEVHQADVASNSDALKEGVLSIRRNKVALKGVVATPIGRGSHQSFNMILRKEFDLFANVVKCRSIPGYPTRHNNVDLVVIRENTEGEYSGLEHQVRPIVTYSL* # ORIGINAL: g13438.t1 original gene structure, not modified by PASA NODE_2733_length_5295_cov_46.8196 AUGUSTUS gene 160 390 . - . ID=g13438;Name=g13438.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS mRNA 160 390 . - . ID=g13438.t1;Parent=g13438;Name=g13438.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS exon 160 390 . - . ID=g13438.t1.exon1;Parent=g13438.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS CDS 160 390 . - 0 ID=cds.g13438.t1;Parent=g13438.t1 #PROT g13438.t1 g13438 MAASERTVVVVGGGIAGLATADALVSQGGVRVILLEAQDYIGGRLRQTQLGEDGNYIELGGEFVHGGKNVTQEIAKR # ORIGINAL: g13439.t1 original gene structure, not modified by PASA NODE_2733_length_5295_cov_46.8196 AUGUSTUS gene 1188 3917 . + . ID=g13439;Name=g13439.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS mRNA 1188 3917 . + . ID=g13439.t1;Parent=g13439;Name=g13439.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS exon 1188 3917 . + . ID=g13439.t1.exon1;Parent=g13439.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS CDS 1188 3917 . + 0 ID=cds.g13439.t1;Parent=g13439.t1 #PROT g13439.t1 g13439 MASSNNTTSSPDGNVSSFVTTFAINAVICALALVAFEILRCRVSFVYEARRRFVPPSKRFDGQSQALFGWVRETVLTSTDEIFERCGLDAAGVILANSTALTICTLTLLFALIVLIPVNYCGGLGLDDFASIALSNVEEKSPLLWAHFVSTYLFTAISLAVLWRAHARFVRMRQRHLCTSRCPSVRSVLVTDIPARLATSGRLYSHFDRLFPGDVESVYVSLPLERLSKNVERHGESERQLHRTRAIAAASPEDEPPTKRTHILCGKKQHIIPILRADIDARAEKVRSLRENYRELDVNDFAEDDDDGRCIESGAGTNAHCSTVCLGRGGDCERGQCASSVSRGKHCRELKHHRSGFVTFRSRRTAAIAAQCVMSARAFAMTVEPAPEPTAVVWMNIPMMKPERAVRSLLFGSAYVALLFFWTIPVAFVASLTTLEELSARLPFLNPIIGASPALKGFLQGFLPTVAYIAFYALLPAIFTAMSLGEGARSRAQVQTKLLGKMFTFSLINGFLALTISGALFEKMDDILSSPASIPSLLAQSIPTQASFFINLVMTRALGGLALDLLCIGPLVVSAVKLRWIAVTPRERFEAKHPGSMRVGLAYADVLFVFAVSIAYSTMSPIILAFACVYFALSYTVTKRQIMRVFVPDHEGGGIAFPAFVDNMSVGLIVYQVTLIGVFAIKRGAVQSALTIPLPIITAMVVMQWRKAFRRASIFVALERTKGGALGGNGTCSPDATVSILTIDRSCETEGGSGRSNETRSPYIHPSLTVQVRPSTNNDADFGLDPEVELARAFADDISSDVDDGVNYNSKPTALVQLAKTQLVAHSQNCDDAAESTGESYGVVLTRSNTGETSGALLRSPQQADSTMLLDDAVVTVVVPAERDDDATASKIKGGDDSDAGELTFEREE* # ORIGINAL: g13440.t1 original gene structure, not modified by PASA NODE_2733_length_5295_cov_46.8196 AUGUSTUS gene 4405 4863 . - . ID=g13440;Name=g13440.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS mRNA 4405 4863 . - . ID=g13440.t1;Parent=g13440;Name=g13440.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS exon 4405 4863 . - . ID=g13440.t1.exon1;Parent=g13440.t1 NODE_2733_length_5295_cov_46.8196 AUGUSTUS CDS 4405 4863 . - 0 ID=cds.g13440.t1;Parent=g13440.t1 #PROT g13440.t1 g13440 MWKGESFPQGQDISDAFVGTPIPPEMSSFTRNKYPDVVVLNAGLWCGFTGLKDFEAYANFRQSFSNIRSPMAMTNGGITAHPRFTDGTIRAQDEYVIAAGEKYGFPVINFRKMVEPVLGPKYCDGTHFSPHIYVNLVQLILNQVCVKAGGCS* # ORIGINAL: g14340.t1 original gene structure, not modified by PASA NODE_604_length_20350_cov_44.5937 AUGUSTUS gene 2333 20350 . + . ID=g14340;Name=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS mRNA 2333 20350 . + . ID=g14340.t1;Parent=g14340;Name=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 2333 6329 . + . ID=g14340.t1.exon1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 2333 6329 . + 0 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 6462 8744 . + . ID=g14340.t1.exon2;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 6462 8744 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 8896 10077 . + . ID=g14340.t1.exon3;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 8896 10077 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 10231 10818 . + . ID=g14340.t1.exon4;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 10231 10818 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 10962 11258 . + . ID=g14340.t1.exon5;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 10962 11258 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 11384 11677 . + . ID=g14340.t1.exon6;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 11384 11677 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 11772 13556 . + . ID=g14340.t1.exon7;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 11772 13556 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 13661 13957 . + . ID=g14340.t1.exon8;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 13661 13957 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 14085 14381 . + . ID=g14340.t1.exon9;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 14085 14381 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 14482 14778 . + . ID=g14340.t1.exon10;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 14482 14778 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 14901 15494 . + . ID=g14340.t1.exon11;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 14901 15494 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 15716 15925 . + . ID=g14340.t1.exon12;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 15716 15925 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 16054 17832 . + . ID=g14340.t1.exon13;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 16054 17832 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 18015 18314 . + . ID=g14340.t1.exon14;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 18015 18314 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 18438 18734 . + . ID=g14340.t1.exon15;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 18438 18734 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 18824 19114 . + . ID=g14340.t1.exon16;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 18824 19114 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 19233 19823 . + . ID=g14340.t1.exon17;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 19233 19823 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 19971 20350 . + . ID=g14340.t1.exon18;Parent=g14340.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 19971 20350 . + 2 ID=cds.g14340.t1;Parent=g14340.t1 #PROT g14340.t1 g14340 MDAAGIASARGLKRMDFSAPFVRRSYGFRLRASPASILFGIFMLIVTATSHVDAQTPVSVSPPNGVSFTSVSVGVNSLDYTYRLLSSFFSLCEFEGLGTTSVTGVRWDPPTVTCAAPAAGIPGRSYRVRLYLWPSAPPSSYSSATFLYNNLAVAAISPVSGSYKTTVSVTVSDVTLFNTTSAVCLFGTIIGRVLSVVMGSGAAVGFVNCEAPALSPTDTLCSVGVAIRQGATPVWGSNNVFRCHSMSFLAVQPTVGVPGTSVVVTLANNVPLAASSSVLCRFGNLTPVAAVVDANSAATIRCSIPAAAAPGSYALTVSVDGGAYYVPNSGAPKFVVQSRSLTMTPSKRSQEVTTTSTVTFSVSLNDTIPAGCNFTVSSNNTAIGVPNVASITVPAGSTSGLSLVVVMTGAIGTCTIRITKASNCAVSIADVVVVSATMRRPNITLGQTSLALQAGQAGSIAVSLSSEPIDDTRLSVQVSGPSGVVTVQTLSLLFTSQNYYVAQQVVLSGVATGNVSIVLFKSSGTSTVTNSSVSIAISGTPAIVVQPSSVLVHAGYSGSFSVSLSRAPIDNTLVSIVVGDTRIGSLNRTTVIFTPTNFSSPVTVSVTGLLAGSCSIQLQKVTGSSSLSASTVAFSALVVPTLILSDATASIFTGATRVITAKLSSDILANVTVALSLSSSSVLSLSASNLTFMAANAKIDQTVTVRGLVAGVSNLTLSASVSSALRVPSALCAVTVVGTTSVVLSPASLETEVGRVTTFNVSLSGRCATGEIRLAVVSSIATGIAVSTSLIVIPANSTAPVAFNVTALAPVTGTVSVSATSGACSVTSAAATIVIRVVPTLIVAGVPSSLYVGRAGSFSIALSSVPMGAVSITVVPVTSGSLSVQPSSFVFGTANYSTPVMVSISGVTTIPLATLSVYRVSGESKVANASFSTSVLGIPSLVVSPTTALLETDSSRTFAVSLSSAPIQSVSLSLAVAASTMGLAIPSVLTFSSSSFSIPQTVTYTTGSPGNSVVNIVDSSVSGAIVPSSRFNATVLAKPSIVVDWAGTAIEPGSSRTIGISLSCSSADLTLLSVTVASRNIATVTPTLLWFGPANSTVVQLLTVQGVTSGENVIMLTKTSGFSTIGSRSISVSVAVPPIVILSTASQTMNVNGGILVAVSLSRTPVDATTITGTAADGTLLVSPASLTFATSNCNVPQTVTVMGKAVGYGSVVFSKSSGRSPIASVSFAGTVIAAPALLVSQAEVTSTIGGKFALSISLSYAPLSSFLLGVMSTTGSASVYPSSLSFSATNYNIKQTVTVLSNSAGSAAIILATLPLSSAYVQGRINVTILGPVRIMAESTTFTMESGRNFPLSIWLTSSCPQNSLVTLTVLCDNEDGSRLRCVDNNNDGLCRDNDHRSWDHRFGRKRSRRDISVDHRDDDDDDDDCFRDYNPDDYTGYRSCSDGVVSTAPKFFVFSTTNGTTPQVALVLPRRVGTARIVLSSVAGCGDVPDVTIQVTVQNSVTLVVGSAATTLFATQSVPVAVTLSGPPLDTTVFSVAGSTNAGIVSLSPSTLTFTRANFASPQNVNALGLIAGTAVVSITLRSGMSVVPTAFFNSTVLAVPLFTLSPGFATTDVGGFVTFGLSLSSSPFGLVVASVASPTGVVTVSPTSFAFTASNFSSIRTVTVTGVTAGSRNVSVALLSGSAPIVPVAYLATVIPAASIDTATSLSVESGTPELLGVRLTSAPIGTTTIGLSVSSSLLLTVSPQWVTFTASNFSSWAYLSVGTSVLSATTATITLAKTSGLSTISARSVAVSLNPVPTIVPSVSEVVAYVGTTLFTVRLSTVPRDTTGILVNGTAIGATASPSLLSFTLTSFAVPQTVSVTKSSPVEGSITLVKTSGTSLIASTVLAARFLAVPSVVLSATQTTVEIGSLFPLIVRLSSAPISAVAVTLSPAASSFLRISASTLYFSPTNFSDAQTVSVVGLAAGNVPIGFSASQAGATFIGATFQATVVVAPTLVLPASIIVEIGSSSSLSVSLSSPAGSALSCVVRSASTSLFDAGTGILSFGYGQIGPAQAQLSGIAAGTGSATVTVTSLTTNFTLSGVVSVTVRAAPEVIISPTSGNVYVNGMTTLTVSLASAPSDTTTLSIVANVAGIGTISPASIIFGVANATVARVVTLVGVSAGSIVISFARTTGSSAIVPKSYSLNVWTTPTVVLQPKSSIFDINSRAVFSLSLSSTVFSDLALAATSNVSYVGIVQSWLTFTVGNYSVPQTATVTASSASVGLITFSPVTASTGIASVGFVADARSSLNLMSSTASILTEVGAQVSVSLWLSLAPIDNTEIGPTTASSIVNLSPYSILYAPANFSAAQTVTFKGTSVGSESIMLGRVSGSSSLSPVVMSVTVRDVPQAIVSPSYVTVNPGTGVVFSVSLSSIPLGNVVLSVAVTTATLGAASPATLTFTTANFNVAQTVTVSATTVGTGVVTVAWFSGPSNVVSTSASVQVDPVPVLVLSSSTLALNLGGSGLFTISLSNAPLITTSFSVAIASGSGLTVSPTSLSFSALNFSTPVNVTVSGSIAGAGSVALSATTTGSKITARAVTVTVVPIPTIIVAPTSLQSEFGSSRTFTVSLSSAPIDATTLSLSVDATIALVNVSAPTYDPANLATVAISLTGNGVGSTTIVISKISGASSISSVSVPVTITSAPVIQTLQSNLVVAPFGTEVMFFRLSAAPLDSSTFVITSSSTSIGTFSPSSFVFTTSNYATYRTVSVSGKAVGRVIGTITKTVGLSAILPVDVAFSVDSNVALLISPAANDIDVGATARFTVQLSSKPNKDASFTLYPSINGIVTVTPTTLKFTLSLYPQTFYVDVKGVAVGDVNVVASETTTSKVGSSSFAVTVIPASSLIVAPPVYNEVSKTSFVGIRLSAAPLDLTTFTIQSLSPTIASITSSSLVFSPSDFATTRSVAVRCLAAGTTSVQVRKASGNSVIADASVNATVLVAPTIVFIPTYVLMYPSGASSILVSLSSLPLDATTLDVSTQVGSATGSPRSLQFSTTSYGVGQSVAVSVSVIGDHVLAFTKTGGSSTVPVSTVAISVIAIPQVIVSPALLSSYHEGETATADIYLSSVPVDSVTFGVAVNASSCARSSIATASFTRATYAQHVPSTFTFVSRGGALFSISQASGTTGISPLSFAVAVLPVPFISITHTYGSTLTLHLNMGVTITVSLSSAPVTDMTVIVSLSDSTLGKLSKSQITFAAMVYPASAVITLTGSAVGSGNVVATASGYRVAISSATAAFAVSPLPVILGSFSRSAVIRGTWAVLTVSLSSAPLDSADVSISSATVGSFNLSTSLATFTRTSWTGASISVQALLVGTPSITLSWLSGRSVFASTTISLVVAPNPQIRVTVGGGSYLYVGRTSWFTVSLMSTPIDPATLAVVVNDATIGSVSNASLVVSASDFTVDRRISLSGLKAGNLTVTVSDQSSLGILSVQTLYQVFAVPQLVVSPSSVRLAMGATQPVMLQLSSRPIDDVLIDLSSSATSIATLNQTSVRLTSTSFASGVSFAISAAFVGSATVSFTCSQAAPVTIATAVVIDTYLDGAITLGNWAGTTVPGLVITRDISLGSTPADDTVLTLSIAGPPTGTVSPSQLTLSRSNFNLPQRISVNVTSTGSYVVTVSKSIGLTTIPSVSFGLTSSTLPRIVTSWTSTIDYIGAYVPLSASLSTAPLDTSVFSVSSTNETIFAVSPVSFSATNVDYTTPSSFSVQLLSAGSSTLLMRSASGRTPIADSVLTVQVVPVPSLVVSPASISVNPGDTAVVSVALSSAPVDRVCVTALLVSGSGVTVATNAWTYKALNFSTQFSLRVTALANPGVFTVTLNPGCTSVSLRNVSFSVAVVAVPRILLEPTTVQLHPSMTQSVAVRLSSVPIDDSVLSVLSSAPGVANVSIARLSFSAVDLTLSTVTLTATTVGSTTLNLARISGTSAIAAVSTAVVVAPALADLIVAVTVDKPLVGSVSSASVVFAKSVTGPISVSIGARSVGDVAISFAVTLNGITFQTAVFSLSVAEVPKVVIVPNRVTLNPSGSTIVNVTLSSPPIDSGLLTVSTGDEGVAGASLTELLFFANNSAVAQRVLVGASAVGSTSLILRPSGLWASSVAAGTAAISVIPSPTITSSRASVDVYAGFNTTFLISLSALPIDTSTLSVVCIGATVSPSRLEFTTLNFAVARTITLSGLSPVTTNLVVVQVGGMSVISSLTMPVKIWRVPLVLVNKPSFIMLPSTSASLSVSLDSHPLGTSLVVMSSSADSVSSSAVQSISFDESNYALSQAIDILAGGVGRANITFAHVLANADSSIAQGQSASTLTVDVIVIPVPTVEISPASAKVYAGTSLSFNVRLSSRPLEDVVLVLDSSNSRLSLMANSLLFSVANFGEYQSVSGTVGASGLVSFEVAAAGTQSQISTADAALTVVAVPSVVFGATSLVVNPMGAAMTTLILSSAPIVDTVVEIRSSSNAVSMDVSSVTFTPVNYLTAQQIIVRGGSVGAAVITASASTGSATSARLGVDVVPSPLVVATVDCPAMVVTGQIALAVRLSSAPLDATEFSIIPSASSVSVVPDKIKLSSADDFASVTVTGTSVGLFNVSVAKIAGSSVIASVGVAFKTINAPSLILESSSPRVYVGENLRLTARLSSAPSCSAAFDVRVDGDPIVSVSVSSVSYFMDGFVAGGSGVELIVRGLRSGYGRVLFASQSALVADGAFGLTVADVPSLVLSYSALQVYVGGVITAVCALSSAPLDDMSVTITSANTDAIAPQSSIVTFTPVTFGVQQTFTLRALRQFKGSVVAVRGVARDNILGGNVTVNVFEAPIAILSISVSSLYVGWTATLSITLSAPPIVSVTVNLKADASVVRLEVTTLTFGAADFSVPQTVKVVGVAAGTSQIVATPDLEVTAASTSLFIETLEVPAFAVYPPQSVGYTGEILSLQGALTGRPAGGYNVLLSAAENVASISAPLLSFTPTSYVNNSAISVTLGAPGTASLVGVVSPLPTISQPYWQATVLSPPSIVVRPLSVALYPLESRQVSVWLNDAPLDVAVVQVSSSNASVATVSPRFLYLSATNYTDALQSVVVSALLEGSVTLLVNISQARFAASPVLIPVNIVPVPRVVVAVDRTFLVPGRTSYLTFRLSSAPIDTIGASVAPSDLSVLSVVVSPVDMTFSSSDYDRIRTATVIAKSAGNATVDFSSPSKLTVSSSTRINVLAAPEVVVSVEAGTMYANQAVTVSVHLSGD # ORIGINAL: g14339.t1 original gene structure, not modified by PASA NODE_604_length_20350_cov_44.5937 AUGUSTUS gene 126 1058 . - . ID=g14339;Name=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS mRNA 126 1058 . - . ID=g14339.t1;Parent=g14339;Name=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 1047 1058 . - . ID=g14339.t1.exon1;Parent=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 1047 1058 . - 0 ID=cds.g14339.t1;Parent=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 868 939 . - . ID=g14339.t1.exon2;Parent=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 868 939 . - 0 ID=cds.g14339.t1;Parent=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS exon 126 290 . - . ID=g14339.t1.exon3;Parent=g14339.t1 NODE_604_length_20350_cov_44.5937 AUGUSTUS CDS 126 290 . - 0 ID=cds.g14339.t1;Parent=g14339.t1 #PROT g14339.t1 g14339 MPIKGDLKEGDFKQLIEQMTTLRQDKDRAIAFMNAQVYGEAQVQSVVICHPNITDKANFDSVLKALKYQEDRDAVKKALNLQ* # ORIGINAL: g3021.t1 original gene structure, not modified by PASA NODE_5860_length_694_cov_92.0162_potentialcontaminant AUGUSTUS gene 341 541 . + . ID=g3021;Name=g3021.t1 NODE_5860_length_694_cov_92.0162_potentialcontaminant AUGUSTUS mRNA 341 541 . + . ID=g3021.t1;Parent=g3021;Name=g3021.t1 NODE_5860_length_694_cov_92.0162_potentialcontaminant AUGUSTUS exon 341 541 . + . ID=g3021.t1.exon1;Parent=g3021.t1 NODE_5860_length_694_cov_92.0162_potentialcontaminant AUGUSTUS CDS 341 541 . + 0 ID=cds.g3021.t1;Parent=g3021.t1 #PROT g3021.t1 g3021 MANDRIYAAMTSCWAAVPHNRPSFVKLFAEFQGMIVGQSHSQEQLQPAEGYVELDPDEAYALYVQH* # PASA_UPDATE: g4375.t1, single gene model update, valid-1, status:[pasa:asmbl_4613,status:3], valid-1 NODE_2598_length_5734_cov_39.9488 . gene 2194 3607 . - . ID=g4375;Name=g4375.t1 NODE_2598_length_5734_cov_39.9488 . mRNA 2194 3607 . - . ID=g4375.t1;Parent=g4375;Name=g4375.t1 NODE_2598_length_5734_cov_39.9488 . five_prime_UTR 3514 3607 . - . ID=g4375.t1.utr5p1;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . exon 2956 3607 . - . ID=g4375.t1.exon1;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . CDS 2956 3513 . - 0 ID=cds.g4375.t1;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . exon 2493 2653 . - . ID=g4375.t1.exon2;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . CDS 2498 2653 . - 0 ID=cds.g4375.t1;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . exon 2194 2365 . - . ID=g4375.t1.exon3;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . three_prime_UTR 2493 2497 . - . ID=g4375.t1.utr3p1;Parent=g4375.t1 NODE_2598_length_5734_cov_39.9488 . three_prime_UTR 2194 2365 . - . ID=g4375.t1.utr3p2;Parent=g4375.t1 #PROT g4375.t1 g4375 MATQAAGSTANDRSQFWENIWLEDGGTNVGQKWDRGVSSPALIDLLRKQAEGHSEDGVRPLPRGRVLVPGCGRGYDLVEFARYGIASSEAIGADIAPMGVKAAQEFISGLTDITDEQKGKIRIAHVDFFTAKPEDEAVGGKFDVAYDYTFFCAIDPSQRGAWALKYGELIATGGELITMMYPIIIKEGGPPFAVHPDDYAKVLTAAGFELVHSAPVPDALSHDGRQGKEVLGRWRRT* # PASA_UPDATE: g4376.t1, single gene model update, valid-1, status:[pasa:asmbl_4614,status:12], valid-1 NODE_2598_length_5734_cov_39.9488 . gene 4095 5679 . - . ID=g4376;Name=g4376.t1 NODE_2598_length_5734_cov_39.9488 . mRNA 4095 5679 . - . ID=g4376.t1;Parent=g4376;Name=g4376.t1 NODE_2598_length_5734_cov_39.9488 . five_prime_UTR 5669 5679 . - . ID=g4376.t1.utr5p1;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . exon 5519 5679 . - . ID=g4376.t1.exon1;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . CDS 5519 5668 . - 0 ID=cds.g4376.t1;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . exon 5035 5059 . - . ID=g4376.t1.exon2;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . CDS 5035 5059 . - 0 ID=cds.g4376.t1;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . exon 4095 4482 . - . ID=g4376.t1.exon3;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . CDS 4277 4482 . - 2 ID=cds.g4376.t1;Parent=g4376.t1 NODE_2598_length_5734_cov_39.9488 . three_prime_UTR 4095 4276 . - . ID=g4376.t1.utr3p1;Parent=g4376.t1 #PROT g4376.t1 g4376 MASDAERKAYCDAKGATSVLSKIIKTGYKALQLEYFFTAGSDEVRAWTIRKGTKAPEAAGKIHGDFEKFFVMAEVMAFNAYKEHGSENAVKAAGKYGMEGKNYVVNDGDIIFFKSNPTNQPAAKKK* # ORIGINAL: g4374.t1 original gene structure, not modified by PASA NODE_2598_length_5734_cov_39.9488 AUGUSTUS gene 201 1832 . + . ID=g4374;Name=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS mRNA 201 1832 . + . ID=g4374.t1;Parent=g4374;Name=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS exon 201 334 . + . ID=g4374.t1.exon1;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS CDS 201 334 . + 0 ID=cds.g4374.t1;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS exon 544 622 . + . ID=g4374.t1.exon2;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS CDS 544 622 . + 1 ID=cds.g4374.t1;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS exon 826 912 . + . ID=g4374.t1.exon3;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS CDS 826 912 . + 0 ID=cds.g4374.t1;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS exon 1167 1247 . + . ID=g4374.t1.exon4;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS CDS 1167 1247 . + 0 ID=cds.g4374.t1;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS exon 1611 1832 . + . ID=g4374.t1.exon5;Parent=g4374.t1 NODE_2598_length_5734_cov_39.9488 AUGUSTUS CDS 1611 1832 . + 0 ID=cds.g4374.t1;Parent=g4374.t1 #PROT g4374.t1 g4374 AREMVEIAERFQSKLSKRAGDVTADEESEFREYMLSMGIASPVTRDTHGTGETYHRELSRQLAEFLIKPLQKTGGMLALTDVYCIFNRARGTQLVSPDDVLRAANLFESLSLPMSLRKFDSGVLIVQMNTLSDDAVAAAVAEFVAAQGSATARDVATARGVSLTLAREQLLTSEAKGVICRDDTPEGLRFYPNLFPSLVS* # PASA_UPDATE: g12028.t1, single gene model update, valid-1, status:[pasa:asmbl_9401,status:12], valid-1 NODE_791_length_17629_cov_40.9302 . gene 12280 15454 . - . ID=g12028;Name=g12028.t1 NODE_791_length_17629_cov_40.9302 . mRNA 12280 15454 . - . ID=g12028.t1;Parent=g12028;Name=g12028.t1 NODE_791_length_17629_cov_40.9302 . exon 15356 15454 . - . ID=g12028.t1.exon1;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . CDS 15356 15454 . - 0 ID=cds.g12028.t1;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . exon 13612 15083 . - . ID=g12028.t1.exon2;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . CDS 13612 15083 . - 0 ID=cds.g12028.t1;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . exon 13264 13367 . - . ID=g12028.t1.exon3;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . CDS 13264 13367 . - 1 ID=cds.g12028.t1;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . exon 12280 13061 . - . ID=g12028.t1.exon4;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . CDS 12283 13061 . - 2 ID=cds.g12028.t1;Parent=g12028.t1 NODE_791_length_17629_cov_40.9302 . three_prime_UTR 12280 12282 . - . ID=g12028.t1.utr3p1;Parent=g12028.t1 #PROT g12028.t1 g12028 MGSEEIGTISLLGAVKSFFTAFISRIGRCRSAAKLFDVLSLLKIDHVGSGECDEEQLKARLTHKWGPIGERGLAQCPHDPRHIMPSFSLRGHLQRCASRHSGGASGPSTLHTAVSAERHVSSRKRRCRGNSSTRFFYERAPCVVTVVVPPVTLHTIAKEVDRETAAGAASAGNAGGVGTAASAEDQARMQLELLSAQRSSRLDEIPDTEVEVVDESTAPLPTLLTTDTAGFQPHSVQEWQLLPTSVVSDVEIGQVPANALKGWLIEHLPSNITDAADVASGADVGLVNYIYGSLLNSSTSWPDVLASDLRDFVGASSRSLVLGVWKVAIAESARIRGIHWLRERLGARDVVSALADSDDTSHVVSHPVQTHSASTADAEPNPTASMKLEHATVVLCPSGDSVRAGGSKTHKRLRRRQPLRGESKTVPSEHQAHSQLHRRKVALSLTGSRLPAHAAALYSVVAAVAAKYRPPPLFAAADISTPVFRPPEAANVQPQAAPFHPDGRPKTRFELIAETRDYKRRRQKYRARGTVTRKTPIEFVRSLVSERMALVLPAQTQTAAIESVGGEGLSSGRRESVHKPLHLDDDRDGQRPSRRDGDSRGNAIPSADWRRSGREHRERDRARDADRGDEGRRGGDRTRLGDRDGDSGGRMSDHRYSASRSETGDGSRRDAGHSRSRHTSTHTRDHDEHDRDGRDSRNRSSNRNGSSVDDGGEGAGARDGLEHRRATHDHSDRDRDRARDRGRRDDDTHERERDRRDDQERVRDRETDRDRTRRPAERDKDSRHGRTEREDARERDLKRRREDDSSAEANTTKRRRD* # ORIGINAL: g12025.t1 original gene structure, not modified by PASA NODE_791_length_17629_cov_40.9302 AUGUSTUS gene 4513 6657 . - . ID=g12025;Name=g12025.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS mRNA 4513 6657 . - . ID=g12025.t1;Parent=g12025;Name=g12025.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS exon 4513 6657 . - . ID=g12025.t1.exon1;Parent=g12025.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS CDS 4513 6657 . - 0 ID=cds.g12025.t1;Parent=g12025.t1 #PROT g12025.t1 g12025 MFARMKRGLSVSRNGADASWANELSEMNAQEVWDIVTNRAFADGNENVINLIRMSGAVQQTTRGVVIKTSPEVARDFLCAVACLYRSEALITSLLKNPHVDPAALDNLAVRLAAETSTGRSWCLRVLLNDTRVDPSAQNNAALRASCAAGCLTSAKLLLGDPRVDAASAATSALKVASQSGHAKIVRLLLSRGGDPGADGGEAACCACEKGHAAVVKCFLRYARFDISQFGSAMFAAACRGGCTDVVTLLLRTGQIGSSIDRCAALRIACARGHDGVVKALIKAGRCDFSSCDPNVLVDACRAGNGEVVRVLLAQNLPNLASCRPAALAAALNCKHVAVATELMTPADLPVIASHGLKELVRTLLRHKDADPAANASGALVGACQAGHEDVVALLLADGRSDPAASDNELLRTCAARGWTEILADLLVVAGRRSSTSSVSKRSERPALDASAYDNEAIRMACAHNKVGCVALLLKNFVVDASSQESAALRMACEHGYVDVVRHLLGDRRQGLHVDPLARNSEALRTASRIGHTSVVALLLADGRADPRAAEGEALSQACGHNHLQIASLLIADGRADPSAAESAAFRYAARNGLLRVMELLIATGKVDLAARNNECARVAREGITAYRRNAGDVLRLLLSSGNPRVCRFVFPVAHEAKRRRGMALLADAVALRVLLNPHHPIGRRRLEQTFMALVEEQEAVIADRRSDHRYAWS* # PASA_UPDATE: g12029.t1, single gene model update, valid-1, status:[pasa:asmbl_9404,status:12], valid-1 NODE_791_length_17629_cov_40.9302 . gene 16883 17505 . + . ID=g12029;Name=g12029.t1 NODE_791_length_17629_cov_40.9302 . mRNA 16883 17505 . + . ID=g12029.t1;Parent=g12029;Name=g12029.t1 NODE_791_length_17629_cov_40.9302 . five_prime_UTR 16883 16927 . + . ID=g12029.t1.utr5p1;Parent=g12029.t1 NODE_791_length_17629_cov_40.9302 . exon 16883 17157 . + . ID=g12029.t1.exon1;Parent=g12029.t1 NODE_791_length_17629_cov_40.9302 . CDS 16928 17157 . + 0 ID=cds.g12029.t1;Parent=g12029.t1 NODE_791_length_17629_cov_40.9302 . exon 17298 17505 . + . ID=g12029.t1.exon2;Parent=g12029.t1 NODE_791_length_17629_cov_40.9302 . CDS 17298 17505 . + 1 ID=cds.g12029.t1;Parent=g12029.t1 #PROT g12029.t1 g12029 MATVAMSNKENAGTLSMPQQMPRAPLGSGESKGNTSAVLSAIPKHMIAEKNAVPVPVPTPVEGASDDTSSGEHKEDENGNRRRWEVTDFDIGRPLGKGKFGSVYLARERQTKFIVALKVLFKSQLQKAGVEHQLRREIEIQSHLR* # PASA_UPDATE: g12023.t1, single gene model update, valid-1, status:[pasa:asmbl_9394,status:12], valid-1 NODE_791_length_17629_cov_40.9302 . gene 1172 2434 . - . ID=g12023;Name=g12023.t1 NODE_791_length_17629_cov_40.9302 . mRNA 1172 2434 . - . ID=g12023.t1;Parent=g12023;Name=g12023.t1 NODE_791_length_17629_cov_40.9302 . exon 1172 2434 . - . ID=g12023.t1.exon1;Parent=g12023.t1 NODE_791_length_17629_cov_40.9302 . CDS 1487 2434 . - 0 ID=cds.g12023.t1;Parent=g12023.t1 NODE_791_length_17629_cov_40.9302 . three_prime_UTR 1172 1486 . - . ID=g12023.t1.utr3p1;Parent=g12023.t1 #PROT g12023.t1 g12023 MNVAVSGLVELMGACALVRFYALVPSILRNAINIYNCDWVFNRDIEIRDPSFFCVGSKWNGHVPLLLKELEAIAAGNTDCQPASLEDSHEMFLMGKLRLDIESMVLRCDDQSYLNFVAMEPWSRGQTFAEALKAAHGAVFVASSQSTAGEYVVPDAMYLLAAYMMEGVPGVVERNYAAAAKHLIEGWRRGSGMCADVVASGALGSLVSKAQADEARVVGAVMGSIVACARLAIENYNSRKLLSALFRAHVATNTMASELSSRWMDISKACVAESVIFPPTRISRDNELRAKIMQLDIAAPRTTLRIGDDKYGLDV* # ORIGINAL: g12024.t1 original gene structure, not modified by PASA NODE_791_length_17629_cov_40.9302 AUGUSTUS gene 2659 2889 . - . ID=g12024;Name=g12024.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS mRNA 2659 2889 . - . ID=g12024.t1;Parent=g12024;Name=g12024.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS exon 2659 2889 . - . ID=g12024.t1.exon1;Parent=g12024.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS CDS 2659 2889 . - 0 ID=cds.g12024.t1;Parent=g12024.t1 #PROT g12024.t1 g12024 MRTWMATIDPYVVVPYWAPWLYGTTASTWRQIGGLVEAYLQKKGAGLDESTIAQLKAVVTRISDYCAENHECPADL* # ORIGINAL: g12026.t1 original gene structure, not modified by PASA NODE_791_length_17629_cov_40.9302 AUGUSTUS gene 6706 7047 . + . ID=g12026;Name=g12026.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS mRNA 6706 7047 . + . ID=g12026.t1;Parent=g12026;Name=g12026.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS exon 6706 7047 . + . ID=g12026.t1.exon1;Parent=g12026.t1 NODE_791_length_17629_cov_40.9302 AUGUSTUS CDS 6706 7047 . + 0 ID=cds.g12026.t1;Parent=g12026.t1 #PROT g12026.t1 g12026 MLLSVQNVMDGCHRRMDDAGLRWQHCKAHDALSGTKYFEQTNRRCFVMTGSTLPLQLTAGTATENRADGGLAAVWSAPTPTVGKPGVSIGTFRASPVSAHCAIEVYFAATTAG* # PASA_UPDATE: g12027.t1, single gene model update, valid-1, status:[pasa:asmbl_9402,status:3], valid-1 # PASA_UPDATE: g12027.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9399,status:12],[pasa:asmbl_9403,status:12], valid-1 NODE_791_length_17629_cov_40.9302 . gene 7911 12175 . + . ID=g12027;Name=g12027.t1 NODE_791_length_17629_cov_40.9302 . mRNA 7911 12175 . + . ID=g12027.t1;Parent=g12027;Name=g12027.t1 NODE_791_length_17629_cov_40.9302 . five_prime_UTR 7911 8005 . + . ID=g12027.t1.utr5p1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . exon 7911 9343 . + . ID=g12027.t1.exon1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . CDS 8006 9343 . + 0 ID=cds.g12027.t1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . exon 9517 10651 . + . ID=g12027.t1.exon2;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . CDS 9517 10651 . + 0 ID=cds.g12027.t1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . exon 10838 10980 . + . ID=g12027.t1.exon3;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . CDS 10838 10980 . + 2 ID=cds.g12027.t1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . exon 11240 12175 . + . ID=g12027.t1.exon4;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . CDS 11240 12025 . + 0 ID=cds.g12027.t1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . three_prime_UTR 12026 12175 . + . ID=g12027.t1.utr3p1;Parent=g12027.t1 NODE_791_length_17629_cov_40.9302 . mRNA 7911 12175 . + . ID=g12027.t1.1.5b6be70c;Parent=g12027;Name=g12027.t1 NODE_791_length_17629_cov_40.9302 . five_prime_UTR 7911 8005 . + . ID=g12027.t1.1.5b6be70c.utr5p1;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . exon 7911 8260 . + . ID=g12027.t1.1.5b6be70c.exon1;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . CDS 8006 8260 . + 0 ID=cds.g12027.t1.1.5b6be70c;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . exon 8873 9343 . + . ID=g12027.t1.1.5b6be70c.exon2;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . CDS 8873 9343 . + 0 ID=cds.g12027.t1.1.5b6be70c;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . exon 9517 10651 . + . ID=g12027.t1.1.5b6be70c.exon3;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . CDS 9517 10651 . + 0 ID=cds.g12027.t1.1.5b6be70c;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . exon 10838 10980 . + . ID=g12027.t1.1.5b6be70c.exon4;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . CDS 10838 10980 . + 2 ID=cds.g12027.t1.1.5b6be70c;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . exon 11240 12175 . + . ID=g12027.t1.1.5b6be70c.exon5;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . CDS 11240 12025 . + 0 ID=cds.g12027.t1.1.5b6be70c;Parent=g12027.t1.1.5b6be70c NODE_791_length_17629_cov_40.9302 . three_prime_UTR 12026 12175 . + . ID=g12027.t1.1.5b6be70c.utr3p1;Parent=g12027.t1.1.5b6be70c #PROT g12027.t1 g12027 MSGHHDSVNEVHVELQSFNDHDDHTGLHRRRSSSNVEGDAAGLAGPALIRQNTSREVPRAFAELSIRLEESVKRTAGAGTSSIDQVDSLRAIRAGRTAVSGPQAKASAVPEDSPEAETWMASCLRWWKWPIGPKKREVQGKSAMLSAATYVAHEHLLPFNDLVHELEVELTHPTSPELGPGVSNADAAKRIQANGFNRLTPPKKKSPVLQFLLEFTSPFMLLLIVCGVLCFVTYGIDPNKDKTNIWLGIVLFALVMFTCVVEFYQHHKAAKIMEGFSKLLPQKSRVVREGRPIVIPAEEIVVGDIVLLVAGDKVPADLRVLTGQELKVDNSSLTGECEPQPRSGEATSDNPFETENIAFYSTMVTDGTGVGVVIRTGDNTLIGQIAKISSMETNEVTTLDIEIRKFVRVVAILTLVQAIIFCVVAIIRGRTVTQTMLDVMGILVANVPQGLPATVSTCLVLIARRMAARNVFVKRLSSIETLGSCSVIVSDKTGTITMNKMTAVHAYCNGTVSRIPRFEVTAPDAATGAGETGVTSGMFLREDNTANGALFRAAALCSRADYETVDGVKKVVADASETAIFNYTEAVVDTIAMRTAHKKLFEIPFNSKNKFQLSIHAMPNEPTKHLLVIKGAPEILLTRCGSVQMASSETPITLGDAERATIQRAVDDLAGCGERVLAFAHRIIDVKHDKKDTPYARTTEGSNFPEDGYIFLGLISLIDPPKDNVREAIATCRSAGITVIMATGDHPKTAAAIAFDIGLITRAGQESGSSIVVTGTQLAEMTPEQLAETLSQKQEIVFARTTPQQKLLIVEALQRLEKIVAVTGDGVNDSPALKQADIGVAMGISGSDVAKEAADIILMDDSFASIVVGIEQGRLLFANLRKSVAYTVTHLTPEVFPYVLFLLGGFPIALSSFLILFVDLGTELAPAIAFANETAESNIMRVPPRNAKTDRMVNAQALSYAYLQFGVLECIPSMLCFFYVMNAHGFPPNSLANAAADYFSVTSDDYIVNGITYTAAEQVNALQKGQSACYAAIAMTQVANLFICKTRRSSLFKHGIMGNKVLLRSIPISMAIMVFVIFVPALNKGIGSSPPTPGYMWLIPLPFMVVFFLLFEAKKYGLRHLPSTSWFHRIFFF* #PROT g12027.t1.1.5b6be70c g12027 MSGHHDSVNEVHVELQSFNDHDDHTGLHRRRSSSNVEGDAAGLAGPALIRQNTSREVPRAFAELSIRLEESVKRTAGAGTSSIDQGRPIVIPAEEIVVGDIVLLVAGDKVPADLRVLTGQELKVDNSSLTGECEPQPRSGEATSDNPFETENIAFYSTMVTDGTGVGVVIRTGDNTLIGQIAKISSMETNEVTTLDIEIRKFVRVVAILTLVQAIIFCVVAIIRGRTVTQTMLDVMGILVANVPQGLPATVSTCLVLIARRMAARNVFVKRLSSIETLGSCSVIVSDKTGTITMNKMTAVHAYCNGTVSRIPRFEVTAPDAATGAGETGVTSGMFLREDNTANGALFRAAALCSRADYETVDGVKKVVADASETAIFNYTEAVVDTIAMRTAHKKLFEIPFNSKNKFQLSIHAMPNEPTKHLLVIKGAPEILLTRCGSVQMASSETPITLGDAERATIQRAVDDLAGCGERVLAFAHRIIDVKHDKKDTPYARTTEGSNFPEDGYIFLGLISLIDPPKDNVREAIATCRSAGITVIMATGDHPKTAAAIAFDIGLITRAGQESGSSIVVTGTQLAEMTPEQLAETLSQKQEIVFARTTPQQKLLIVEALQRLEKIVAVTGDGVNDSPALKQADIGVAMGISGSDVAKEAADIILMDDSFASIVVGIEQGRLLFANLRKSVAYTVTHLTPEVFPYVLFLLGGFPIALSSFLILFVDLGTELAPAIAFANETAESNIMRVPPRNAKTDRMVNAQALSYAYLQFGVLECIPSMLCFFYVMNAHGFPPNSLANAAADYFSVTSDDYIVNGITYTAAEQVNALQKGQSACYAAIAMTQVANLFICKTRRSSLFKHGIMGNKVLLRSIPISMAIMVFVIFVPALNKGIGSSPPTPGYMWLIPLPFMVVFFLLFEAKKYGLRHLPSTSWFHRIFFF* # ORIGINAL: g14175.t1 original gene structure, not modified by PASA NODE_1672_length_9862_cov_41.2912 AUGUSTUS gene 139 1573 . - . ID=g14175;Name=g14175.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS mRNA 139 1573 . - . ID=g14175.t1;Parent=g14175;Name=g14175.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS exon 869 1573 . - . ID=g14175.t1.exon1;Parent=g14175.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS CDS 869 1573 . - 0 ID=cds.g14175.t1;Parent=g14175.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS exon 139 593 . - . ID=g14175.t1.exon2;Parent=g14175.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS CDS 139 593 . - 0 ID=cds.g14175.t1;Parent=g14175.t1 #PROT g14175.t1 g14175 MSDATAAVVAPVATQASAVASDAAQANNDTTTLSAHTPLSNTPSSTSTPASQSTPSSPATAAARKPPPQTPVLPVHPVAHSASASHASTTPQQPQGGLAPTTPLSTATSPSSATNATARPPTVSTPAPANPNSFGAKQAAALSNLTIQQQLRYQQLQLERMRKLRAAQAAAASSGGGHVVGSGGVSSEASPALVGFALPPVPSSASPALAHVRPGDANFHHGVRPRYVVPTARTPSAPVRPQPSPRPPSTPTAIRPSNDTPYIPNPNFYARMGSVPVRQPYSPHTPNTAAKATGAGAKANGSASAAKKAEVKRPLSGSHVPMAQGRQQQHQQQQQQQQQQQHQQQQQQQQKQQQQTQHQQQTQQQANAKKRAADALEDPRVRKVRQ # ORIGINAL: g14177.t1 original gene structure, not modified by PASA NODE_1672_length_9862_cov_41.2912 AUGUSTUS gene 7775 8987 . - . ID=g14177;Name=g14177.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS mRNA 7775 8987 . - . ID=g14177.t1;Parent=g14177;Name=g14177.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS exon 8946 8987 . - . ID=g14177.t1.exon1;Parent=g14177.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS CDS 8946 8987 . - 0 ID=cds.g14177.t1;Parent=g14177.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS exon 7775 8728 . - . ID=g14177.t1.exon2;Parent=g14177.t1 NODE_1672_length_9862_cov_41.2912 AUGUSTUS CDS 7775 8728 . - 0 ID=cds.g14177.t1;Parent=g14177.t1 #PROT g14177.t1 g14177 MPPSTTSFSSLPYEVIDVSALGGVHSLNLSRVTDVSALGGVHSLDLSKCRSVTDVSALGGVHSLDLSKCYYVTDVSALGGVYSLNLRGCKFVMDVSALSGVHSLNLSHCERVTDVSVLGGVHSLDLSHCERVTDVSVLGGVHSLDLSHCERVMDVSALGGVHSLDLSFCEGVRDVSALGGVHSLNLSFCEGVRDVTALGGVHSLNLSGFERVRDVSALGGVHSLNLTRCKGVTDVSALGGVHSLNLSQCKGVTDVSALGGVHSLNLSGCDRVTDVSALGGVHSLNLERCEGVTDVSALSSVHSLNLSHCTRLTDSALLCGVHSLNLHGCRL* # PASA_UPDATE: g14176.t1, single gene model update, valid-1, status:[pasa:asmbl_2298,status:3], valid-1 NODE_1672_length_9862_cov_41.2912 . gene 2225 6646 . - . ID=g14176;Name=g14176.t1 NODE_1672_length_9862_cov_41.2912 . mRNA 2225 6646 . - . ID=g14176.t1;Parent=g14176;Name=g14176.t1 NODE_1672_length_9862_cov_41.2912 . five_prime_UTR 6562 6646 . - . ID=g14176.t1.utr5p1;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . exon 3062 6646 . - . ID=g14176.t1.exon1;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . CDS 3062 6561 . - 0 ID=cds.g14176.t1;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . exon 2510 2686 . - . ID=g14176.t1.exon2;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . CDS 2510 2686 . - 1 ID=cds.g14176.t1;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . exon 2225 2357 . - . ID=g14176.t1.exon3;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . CDS 2276 2357 . - 1 ID=cds.g14176.t1;Parent=g14176.t1 NODE_1672_length_9862_cov_41.2912 . three_prime_UTR 2225 2275 . - . ID=g14176.t1.utr3p1;Parent=g14176.t1 #PROT g14176.t1 g14176 MSDQKPKPQLASIFLRNPKKKEDDALAPKAKKIEARKSERDDADAYTPKARKNVESVPAVKQRKTKESSVLSKPTLKDEQKEAARIAREIIGERAATTTRTIAQVLGGTRSSTQPTVQGEGGVGPDAVIYTEAVKADDMRIAPLPTTTHVRQWDGREVDLLSACVGVGISVDSFMDGQLRLRECPSQLISDDAPGALAKAMFGKKMPIRERNLPVALPTGENYGVVVYRMDGIVCPPPSASLSWIPADQLRRCQALSMQGPGVTWADRYKPRSGDDVLGNNETVRCISRWLASWKAQISPPPYSDEASKPKANNKRRGNAGRGKKGKRRRVISSSDGDGENSDDAFCSSGSDFESIGVVSGRDDDTTTALPPLLLTGPPGSGKTAAVYACANELGFAVFELNCSTRRTGKCLLDLLGEATQSHQVVARGKNLFGGATVAGSGSASGSPASAAGVGTPKGDEFLRDALSLILLDEIDAVFDDDRGFWAAVSTLAQQSKRPVILSGSVECEDIALASHVQRLRFNRPPVDVLAGYAGAVCAAEGALICRSDAVSVAASTNCDTRRMLGELQFWVGGDIAIAKEAVTPGTPGDSDPSMFPPLSFRMDAGVSDAFRVTSLALAPRLSHPSSSSLEMKSEKDTPESASQTKNNESSSSEMETLSDFPSVAEVEAVLGNASSWGLDLAARMHIAALRNVAAVVPRFELPAQTACVEMTTTAAPTTEVCDARASEHSCDGVVVDVGEEKISDGLLVDVDEEKMQDAQDDGVASQSERGSQLPSDALDAQCMPSLTISADSIDVVMLDSDSGIVCETASGDESKNGNACEKESEKESEKERVDVTMDEDGSQHAETDTSLTRDIHSPECSPFSLGNQQRDGCEEQRGVGHVVDAHAHVMDANATTTMAFTANAAVIDGGSAGHMVCEMSDTADASVPRQCETGDAMGDHDGSRDMCVSVSVASGAAGIAEEAEGGCDAQQSVCALDRGMSTATPDDSAVTAQTTDINIQEDVLGYAGGGCGGHAASIAPPSDAVDIISAERARRLVIDATLLAERKSRVQKHARMMHSGRSELERRACDDGIASLLDFTEAASFVDAHIKPMRTRLAGLDGGVEDGAEGGGCAWAWKVDHSMYKTACDAMCLRSVGDACRAIDTTLPSDKSKPLHVTVPEWTTRRTPDAFRDEMMPCITRITSPIHYINSSALFADYAPALRSICHTESLRRTVRNASTRTSRRFRHYLLNFDVVESDVDTLSRQAFQSG* # ORIGINAL: g8012.t1 original gene structure, not modified by PASA NODE_2610_length_5671_cov_43.5109 AUGUSTUS gene 830 1603 . + . ID=g8012;Name=g8012.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS mRNA 830 1603 . + . ID=g8012.t1;Parent=g8012;Name=g8012.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS exon 830 1387 . + . ID=g8012.t1.exon1;Parent=g8012.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS CDS 830 1387 . + 0 ID=cds.g8012.t1;Parent=g8012.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS exon 1490 1603 . + . ID=g8012.t1.exon2;Parent=g8012.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS CDS 1490 1603 . + 0 ID=cds.g8012.t1;Parent=g8012.t1 #PROT g8012.t1 g8012 MEHNEKAPLLGPTPAAPTLQGDGVVSVAPPGYYEHAGPAQPLQPGSPIPNAETAEVVKQQCRCPHCTKLVNFSSSTAHVNIGCPHCRHVFNAAGVPRWPVGQIPPPPRGKRQSTCPHCKTLLNYPENVTSFMCSTCRRHCAVSFTAIQTLKRRYIAVLVLGLILIGVGVGVTVGTYITATDNAHGGFYVVMYGPIISGVLLVVRGAMGLGSVRSMQPLEIYEA* # ORIGINAL: g8013.t1 original gene structure, not modified by PASA NODE_2610_length_5671_cov_43.5109 AUGUSTUS gene 1917 2828 . - . ID=g8013;Name=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS mRNA 1917 2828 . - . ID=g8013.t1;Parent=g8013;Name=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS exon 2706 2828 . - . ID=g8013.t1.exon1;Parent=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS CDS 2706 2828 . - 0 ID=cds.g8013.t1;Parent=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS exon 2407 2502 . - . ID=g8013.t1.exon2;Parent=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS CDS 2407 2502 . - 0 ID=cds.g8013.t1;Parent=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS exon 1917 2000 . - . ID=g8013.t1.exon3;Parent=g8013.t1 NODE_2610_length_5671_cov_43.5109 AUGUSTUS CDS 1917 2000 . - 0 ID=cds.g8013.t1;Parent=g8013.t1 #PROT g8013.t1 g8013 MADGAVPVNAVEAPLDLIRLSLDERIYVKLRSDREIRGRLHAYDQHLNMILGEVEETITSVEIDEETYEELVKTTKRTVPMLFVRGDGVILVSPPLRTAA* # PASA_UPDATE: g8014.t1, single gene model update, valid-1, status:[pasa:asmbl_4654,status:12], valid-1 NODE_2610_length_5671_cov_43.5109 . gene 3073 5199 . - . ID=g8014;Name=g8014.t1 NODE_2610_length_5671_cov_43.5109 . mRNA 3073 5199 . - . ID=g8014.t1;Parent=g8014;Name=g8014.t1 NODE_2610_length_5671_cov_43.5109 . five_prime_UTR 5140 5199 . - . ID=g8014.t1.utr5p1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 5035 5199 . - . ID=g8014.t1.exon1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 5035 5139 . - 0 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 4754 4867 . - . ID=g8014.t1.exon2;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 4754 4867 . - 0 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 4454 4541 . - . ID=g8014.t1.exon3;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 4454 4541 . - 0 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 4161 4246 . - . ID=g8014.t1.exon4;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 4161 4246 . - 2 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 3903 3973 . - . ID=g8014.t1.exon5;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 3903 3973 . - 0 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 3368 3499 . - . ID=g8014.t1.exon6;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 3368 3499 . - 1 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . exon 3073 3269 . - . ID=g8014.t1.exon7;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . CDS 3086 3269 . - 1 ID=cds.g8014.t1;Parent=g8014.t1 NODE_2610_length_5671_cov_43.5109 . three_prime_UTR 3073 3085 . - . ID=g8014.t1.utr3p1;Parent=g8014.t1 #PROT g8014.t1 g8014 MLRQVDLSSDVFALCYAHAHMTEREEVMGLLVGNIEDDVATVTDLVILRRLDRRHDRVEISPEQLSAAVAKAESKSAEAGKKLRIVGWYHSHPHITVMPSHVDVRTQAQYQTLDNCFVGLIFACFSGENEQDVARAKQAGRMDVTCFQSRMGDSGFASVEVPLRIVPTNGASFARLDEMSVLPSILLGEERDMYDAALRSTGEPNAAPFTTLMNGAVFTHAVCDMADKVCVPLLGTLRDRLRANEIATRYYAKSGQTHP* # ORIGINAL: g11484.t1 original gene structure, not modified by PASA NODE_2587_length_5781_cov_84.7983 AUGUSTUS gene 1630 3864 . + . ID=g11484;Name=g11484.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS mRNA 1630 3864 . + . ID=g11484.t1;Parent=g11484;Name=g11484.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS exon 1630 3864 . + . ID=g11484.t1.exon1;Parent=g11484.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS CDS 1630 3864 . + 0 ID=cds.g11484.t1;Parent=g11484.t1 #PROT g11484.t1 g11484 MSMAPLSRLRWGCRLSICSASWYRTVSFVAAIVGLCVGPACVSAAAHYKTIDYDWDNIHKLILIVASLLGDLFVLNFHCRSPPHPKFLLIPKRRFSIRLHLISGTAEIICGIACFLVDEPRIPALMMATIALSCHCTTALFQTNIVFGMKAVMIPAYVFVIGLHAYFAARLLADPNSFTLAINQLLVLHIYVWCRILYAGFARLGIFGHHRYSVAITLSGLIVIPAVAGYAANMIALVCIIVLNVVYRAARKMNAYETSLWFSEKHRETIDGGEGSAAMRVLVRATSALSASPSKTFFADTLTTAFTPGENVRDKHDGDHARVQHAHAIDAGPCVQSQSLGSPRRRNPPEQLPRLGSELSADATRTAQFVRAFAAASRATDDDDETDRRGMARQTADSIFAMLDTSRSGRVRVSVVVDFFEICGVARVLHVEKLLVEVDGHSTRLGDVTPDALSLLHQADTRATHPLRHDEESADGAGSPAGTAAHVTLDGFVRWFLAAYEGHLAATQGISTDLNDEREIAQCIFSRLDADKSGYLELCELHCLLVEWGLPVGEAEEFLRLFDDGDGRIDFGEFVSFMRPVWLYAYGILREQSLEAQRMQRAQERIAADRKVAEDKTVVPQYGHKHTASGVWVQRQEHSRPSSGAGMTRTATESEKDSLRQPSASSRPKTLRTGKNGAWMGCASANDGGNCSSETARVREDGGGGMVDILCAHTNQCEQTAAKNDTEETIAVMEAADMPGCVDD* # ORIGINAL: g11485.t1 original gene structure, not modified by PASA NODE_2587_length_5781_cov_84.7983 AUGUSTUS gene 4165 4948 . - . ID=g11485;Name=g11485.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS mRNA 4165 4948 . - . ID=g11485.t1;Parent=g11485;Name=g11485.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS exon 4624 4948 . - . ID=g11485.t1.exon1;Parent=g11485.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS CDS 4624 4948 . - 0 ID=cds.g11485.t1;Parent=g11485.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS exon 4165 4358 . - . ID=g11485.t1.exon2;Parent=g11485.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS CDS 4165 4358 . - 2 ID=cds.g11485.t1;Parent=g11485.t1 #PROT g11485.t1 g11485 MAGLAEHDLVTGKPRPSNKRPRDDAPSTHDAVIRPAKTLAAVAGDVDSTLPFASRPAESREATRARDSSPAPKAPRRGVEGENGDHHMHLAHDGNNGHAEAALKGVPAAPEPKPSGTMCPVCMDQSKAAFIAPCGHMCCYPCWQGLSRNGAIDCPVCRAPTREKQLRKCFFM* # ORIGINAL: g11486.t1 original gene structure, not modified by PASA NODE_2587_length_5781_cov_84.7983 AUGUSTUS gene 5400 5693 . - . ID=g11486;Name=g11486.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS mRNA 5400 5693 . - . ID=g11486.t1;Parent=g11486;Name=g11486.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS exon 5400 5693 . - . ID=g11486.t1.exon1;Parent=g11486.t1 NODE_2587_length_5781_cov_84.7983 AUGUSTUS CDS 5400 5693 . - 0 ID=cds.g11486.t1;Parent=g11486.t1 #PROT g11486.t1 g11486 MRTRTLPSTPHLPDLRAHVQRQLKARVTDSQSRQFHSVLGAFRSKGSLSALVDGLVPLFDCPENIDLLADFRAFIKKSEQKTFESLVATRFRHGAQL* # ORIGINAL: g3460.t1 original gene structure, not modified by PASA NODE_3845_length_2637_cov_43.4559 AUGUSTUS gene 150 2383 . - . ID=g3460;Name=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS mRNA 150 2383 . - . ID=g3460.t1;Parent=g3460;Name=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 2202 2383 . - . ID=g3460.t1.exon1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 2202 2383 . - 0 ID=cds.g3460.t1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 1823 1968 . - . ID=g3460.t1.exon2;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 1823 1968 . - 1 ID=cds.g3460.t1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 1407 1548 . - . ID=g3460.t1.exon3;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 1407 1548 . - 2 ID=cds.g3460.t1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 932 1010 . - . ID=g3460.t1.exon4;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 932 1010 . - 1 ID=cds.g3460.t1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 433 524 . - . ID=g3460.t1.exon5;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 433 524 . - 0 ID=cds.g3460.t1;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS exon 150 223 . - . ID=g3460.t1.exon6;Parent=g3460.t1 NODE_3845_length_2637_cov_43.4559 AUGUSTUS CDS 150 223 . - 1 ID=cds.g3460.t1;Parent=g3460.t1 #PROT g3460.t1 g3460 MQCEDLDSAVDEIIAPRSGDDDSAIDLSASRPLKMSQSVEIEEEEEQPLHRDVVRECLEKRPEERNMDDIEDILTEMNHIKAFSHLTSSVRTELCRVILYDVVEKAGGVLFRQGDEGTSWYVISKGSVNVEVNGIVVCALQEGEGFGELALVNDKPRAATIVTRQDDCHFWRVEKDDFKLILKDIERNTLTFEEHGQVVMVMENRVMNDEKQRGYVVMTATPEKLTERLEEDNSGDNA # ORIGINAL: g2118.t1 original gene structure, not modified by PASA NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS gene 1499 2091 . + . ID=g2118;Name=g2118.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS mRNA 1499 2091 . + . ID=g2118.t1;Parent=g2118;Name=g2118.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS exon 1499 1530 . + . ID=g2118.t1.exon1;Parent=g2118.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS CDS 1499 1530 . + 0 ID=cds.g2118.t1;Parent=g2118.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS exon 1722 2091 . + . ID=g2118.t1.exon2;Parent=g2118.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS CDS 1722 2091 . + 1 ID=cds.g2118.t1;Parent=g2118.t1 #PROT g2118.t1 g2118 MLRESWRFRIGWKNVLDATHVRFAAQAWGESAATTVIQFNGVPVHTKSTCNGGANKFAAADNVDLGSFGETAMASLSRVEWAYKSYGLFPTIQSLYTSDVDIYIAGHSGSDVPGCSNPTGWGGGGTIMNVFVR* # ORIGINAL: g2119.t1 original gene structure, not modified by PASA NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS gene 4171 5163 . - . ID=g2119;Name=g2119.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS mRNA 4171 5163 . - . ID=g2119.t1;Parent=g2119;Name=g2119.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS exon 4406 5163 . - . ID=g2119.t1.exon1;Parent=g2119.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS CDS 4406 5163 . - 0 ID=cds.g2119.t1;Parent=g2119.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS exon 4171 4306 . - . ID=g2119.t1.exon2;Parent=g2119.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant AUGUSTUS CDS 4171 4306 . - 1 ID=cds.g2119.t1;Parent=g2119.t1 #PROT g2119.t1 g2119 MTTSPVCAPMVFEGHKGPVYAVAFSRDGKDDCDGKRRQNGTFVGYGNGSMSPHAQRTYTQRLFDCIVAQRKTIATGSHYNKARLWDTATGQCRLTLSGHTSYVHYRATERRLQREATTRQHVCGTQRRDNVASRSAGIQATTACLWDTATGQCRLTLCGHSGGVCSVTFSPDGQMIATGSSDTTVRLWDTATGQCRLTLSGHTDSWAVAFSPDRQAIVTGSDDYTARLWDVKGLRNEVERAGRSYLLISRSRLTASAVNALRVVKSPIANPSMQHVDNIEAWKRIQARAHADFQQTG* # PASA_UPDATE: g2120.t1, single gene model update, valid-1, status:[pasa:asmbl_9547,status:12],[pasa:asmbl_9548,status:12],[pasa:asmbl_9549,status:12],[pasa:asmbl_9550,status:12], valid-1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . gene 12174 15828 . + . ID=g2120;Name=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . mRNA 12174 15828 . + . ID=g2120.t1;Parent=g2120;Name=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . five_prime_UTR 12174 12207 . + . ID=g2120.t1.utr5p1;Parent=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . five_prime_UTR 12349 12897 . + . ID=g2120.t1.utr5p2;Parent=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . exon 12174 12207 . + . ID=g2120.t1.exon1;Parent=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . exon 12349 15828 . + . ID=g2120.t1.exon2;Parent=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . CDS 12898 15474 . + 0 ID=cds.g2120.t1;Parent=g2120.t1 NODE_821_length_17311_cov_25.0114_potentialcontaminant . three_prime_UTR 15475 15828 . + . ID=g2120.t1.utr3p1;Parent=g2120.t1 #PROT g2120.t1 g2120 MSAIRVAAAAAKCADTVRQLVQHRDRARATLVNEVDNLAKKMNNTGLIAKIERYATTVAKLSECTYAIAPDQADRLMIADKPHINVPAAIIEALRQYDNWRRRLDTSYDHTDTVATALSAHVRELADVLGDAHVSLSNGALNDAQDDCRALCATLTTAIANESAAYAAVGNPPVEVLMKAAQRMRSHAMSAHKEITQTMAECLRLVRVADELRPFVDMTFSPPTDAEAVRLKGVLSKQRRAMERVALDLRHAIEDGDAAGTNKYRAMKESAEKEYRTTATSLELECLRLLRLAGSHFPELIVLCKAVDVAVGVELGGVFSEATSLSLYDVERALSEGGVNSRHTVLLAKRATADARGRNSKVVLKQFSFDANSDRRSFLREARRLVRLTHPHVVAITRIFVDALHTGVNIDNGKQCGFIEMPYYSNGDIASWIERTSPSDALKRRALQGILRGIEHVHHEGIVHGDVKPQNMFIDADGRGVLGDFDVSVDNQMRTRALLTLAPTRAGAVVGTDAYFAPEILREQSPATMSSDMYSFALSVFDVHFPPIGNSLKRPTPQAVAFEKKVVRVPADCGDGDLQGFLEAVLSAPARRLTSREALAHAYFATLNVGDVSATGIVRGCVVCFESYARSEGIECDNGANGGHFVCALCLNGYIESCSEAAGMDALARNKGGIKCPERGCNAATYGIARIAELVDADVYATLMDAQWRIKEKQVVSEMEARYAQQLEQERRRNAQSVVEGHRRRIAEDILTLKCPRCALAFVDFEGCFALTCGGCGAGFCAWCLADCGADAHGHVAKCPMRLSADALFGQFSEFERAQSSRRGRELRAYLAAIDDVTVRNAVKEAVKKDAADVGVVV* # ORIGINAL: g6868.t1 original gene structure, not modified by PASA NODE_5745_length_730_cov_50.1082 AUGUSTUS gene 1 696 . - . ID=g6868;Name=g6868.t1 NODE_5745_length_730_cov_50.1082 AUGUSTUS mRNA 1 696 . - . ID=g6868.t1;Parent=g6868;Name=g6868.t1 NODE_5745_length_730_cov_50.1082 AUGUSTUS exon 637 696 . - . ID=g6868.t1.exon1;Parent=g6868.t1 NODE_5745_length_730_cov_50.1082 AUGUSTUS CDS 637 696 . - 0 ID=cds.g6868.t1;Parent=g6868.t1 NODE_5745_length_730_cov_50.1082 AUGUSTUS exon 1 512 . - . ID=g6868.t1.exon2;Parent=g6868.t1 NODE_5745_length_730_cov_50.1082 AUGUSTUS CDS 1 512 . - 0 ID=cds.g6868.t1;Parent=g6868.t1 #PROT g6868.t1 g6868 MVVSTRGTRSHSRAVFREVECIFIDAVHSGVEGGKPFGFIEMPYYENGDIASWVVRTNPSAVLRRRALQGVLRGLEHVHHEGIVHCDVKPQNMLIDADGRGVLADFDVSVNNAARTMAFKTIAPTSTLQGGVVGTEGYIAPEIFKGGVATVHSDMYSFALSVFDIHFLSVVRPLPHDVVFNGAVIQIPDE # ORIGINAL: g3148.t1 original gene structure, not modified by PASA NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS gene 2731 3900 . + . ID=g3148;Name=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS mRNA 2731 3900 . + . ID=g3148.t1;Parent=g3148;Name=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS exon 2731 2743 . + . ID=g3148.t1.exon1;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS CDS 2731 2743 . + 0 ID=cds.g3148.t1;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS exon 2891 3039 . + . ID=g3148.t1.exon2;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS CDS 2891 3039 . + 2 ID=cds.g3148.t1;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS exon 3181 3223 . + . ID=g3148.t1.exon3;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS CDS 3181 3223 . + 0 ID=cds.g3148.t1;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS exon 3368 3900 . + . ID=g3148.t1.exon4;Parent=g3148.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant AUGUSTUS CDS 3368 3900 . + 2 ID=cds.g3148.t1;Parent=g3148.t1 #PROT g3148.t1 g3148 MHAQGVALAGPRVLLGVAFREASRSGRLQLATSGGLHVARMRSRPWTHCGSIIEALLASAEDSNVTAAVDLAAGEFRMQADEIVEWALSRAIPARAAMLQTARQAVALAALASTLSQHWFGVCAAPKGRRDPFVALVVACELLIASCARAAGGIGRGLHAPPAVFAVELLGAVSASSRMVPRHCLPPPAILRRISRAVCAASRDGLVPPLCDLDTEGGRRLCAQLLCYPVATPLGDAAGSGFAGQ* # PASA_UPDATE: g3149.t1, single gene model update, valid-1, status:[pasa:asmbl_4563,status:3], valid-1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . gene 3284 5521 . - . ID=g3149;Name=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . mRNA 3284 5521 . - . ID=g3149.t1;Parent=g3149;Name=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . five_prime_UTR 5497 5521 . - . ID=g3149.t1.utr5p1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 5374 5521 . - . ID=g3149.t1.exon1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 5374 5496 . - 0 ID=cds.g3149.t1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 5155 5266 . - . ID=g3149.t1.exon2;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 5155 5266 . - 0 ID=cds.g3149.t1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 4422 4986 . - . ID=g3149.t1.exon3;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 4422 4986 . - 2 ID=cds.g3149.t1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 3284 4228 . - . ID=g3149.t1.exon4;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 4096 4228 . - 1 ID=cds.g3149.t1;Parent=g3149.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . three_prime_UTR 3284 4095 . - . ID=g3149.t1.utr3p1;Parent=g3149.t1 #PROT g3149.t1 g3149 MEDASGACVFRVPWDQKQAFRSVHSLIECYSQHFALPVCKKAAARVPQNDAAGTVDGLPVGSEGGSLSADLILARFTLRTAPEIPAPEPQSPKSNMDAPDGRQPLSSPIASRQTGSAIGRPADRSAVVTASATAAVTAATVNAVTVTSPSPSPSAAAPLIATASSATSSGAQADDSNSGMRGRAGSNARGGDARGKAGVLRVMQRRGPFSSWKSRWIVLQGAVLSVYRDAAEQAAGGRPKHALRLARGSTCTLADGDALSRRMGPNVFECVADASTSSSDALVLQAVNLDEAVTWMAAIERAIEMSATRT* # PASA_UPDATE: g3147.t1, single gene model update, valid-1, status:[pasa:asmbl_4564,status:12], valid-1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . gene 140 2437 . - . ID=g3147;Name=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . mRNA 140 2437 . - . ID=g3147.t1;Parent=g3147;Name=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 2294 2437 . - . ID=g3147.t1.exon1;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 2294 2437 . - 0 ID=cds.g3147.t1;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 1287 2011 . - . ID=g3147.t1.exon2;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 1287 2011 . - 0 ID=cds.g3147.t1;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 916 1041 . - . ID=g3147.t1.exon3;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 916 1041 . - 1 ID=cds.g3147.t1;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 550 725 . - . ID=g3147.t1.exon4;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 550 725 . - 1 ID=cds.g3147.t1;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . exon 140 265 . - . ID=g3147.t1.exon5;Parent=g3147.t1 NODE_2562_length_5864_cov_39.5037_potentialcontaminant . CDS 140 265 . - 2 ID=cds.g3147.t1;Parent=g3147.t1;3_prime_partial=true #PROT g3147.t1 g3147 MCSICQALRLYRRALDLSEKQLGKSHPSVAQSIHEIGRIFVAQRKYTEAQPLFERALDIREQHFGYTNPALAQLLQELGTVHQAQEHYIQATLLFERALRITEEVYGESHPAVSISIHGLAGVLQSQGKYDDALPLYQRALAINEKEVGMDHPLYASALVGIAIIYQIKGRQKEAVPLLERAKLIQERLLPDSIELASTLGHLADAYQSFGRSDEAVVLYQRALDIRDAELERVKAALVATSNGVPLKSKDIPKPDPNTAAIALAMGMIYQQQHNYAKARELFERAHKTSEEIFGPESAPVASVLQSMGSLFEDEGKLREAIPVHQRSLKIRETSLGKEHVTVGNSLHLIGMLYNRLGDNAQAMENFQRSLVIKEKALGCDHPEISATLRAIAGIRHREGRSEEALTLCNRSLAIAEKALGPAHPSLLTTYE # PASA_UPDATE: g12202.t1, single gene model update, valid-1, status:[pasa:asmbl_6213,status:12], valid-1 NODE_3558_length_3205_cov_25.0769 . gene 477 2764 . + . ID=g12202;Name=g12202.t1 NODE_3558_length_3205_cov_25.0769 . mRNA 477 2764 . + . ID=g12202.t1;Parent=g12202;Name=g12202.t1 NODE_3558_length_3205_cov_25.0769 . five_prime_UTR 477 591 . + . ID=g12202.t1.utr5p1;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . exon 477 801 . + . ID=g12202.t1.exon1;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . CDS 592 801 . + 0 ID=cds.g12202.t1;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . exon 1366 2391 . + . ID=g12202.t1.exon2;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . CDS 1366 2391 . + 0 ID=cds.g12202.t1;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . exon 2585 2764 . + . ID=g12202.t1.exon3;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . CDS 2585 2749 . + 0 ID=cds.g12202.t1;Parent=g12202.t1 NODE_3558_length_3205_cov_25.0769 . three_prime_UTR 2750 2764 . + . ID=g12202.t1.utr3p1;Parent=g12202.t1 #PROT g12202.t1 g12202 MARVVAFITILLGAAQLASTAVGPPMLSAKNDGGLEIAARAIVVNSNSTSKFLGSLLVQKSSSSDPVDIVDSISALRAQADVLSAQAAGCRRTYSPFLSASAYDEVGIASANGTLPMSSVGSVRDLILMSRMGGILLAFRKNNFGTLDLLWTRKSAGLPSGVTSLTPGVVEDPATGVVYLGWRIGETPQSGVVEAIDLSDIYNPVRLGLMSTQGIPMALAFVPRTATISQTPVVIAGECICSSGKLSGASVIDVSDPRSMSVLSTISTGPLSLNSTQYIVVVRDAIVALATFSYGSFALVDFAKPRNPIFLSRVSMELPVGGGAVYSQAIEAVDGYLALGISKYGVAQRPGLLMYDISNTRSPVMSSPIVFSSIGTGNVRAVLRMGQRNELLVVLQDRSDLTFASGMRPADEGVLIFDISNRTTPILKSTISIPSIYALTRLTATSFATSSRTGALSLYTIGYLCE* # ORIGINAL: g2718.t1 original gene structure, not modified by PASA NODE_8018_length_392_cov_41.9117_potentialcontaminant AUGUSTUS gene 1 392 . - . ID=g2718;Name=g2718.t1 NODE_8018_length_392_cov_41.9117_potentialcontaminant AUGUSTUS mRNA 1 392 . - . ID=g2718.t1;Parent=g2718;Name=g2718.t1 NODE_8018_length_392_cov_41.9117_potentialcontaminant AUGUSTUS exon 1 392 . - . ID=g2718.t1.exon1;Parent=g2718.t1 NODE_8018_length_392_cov_41.9117_potentialcontaminant AUGUSTUS CDS 1 392 . - 1 ID=cds.g2718.t1;Parent=g2718.t1 #PROT g2718.t1 g2718 PIVTLPVATRSYVEDATASTLFDNTLVFSDTDSAEFASASLFITNAQDFDSETGLCLEELSADDVEDVETLVTLDGRRLTLLGPLSVADMLALVKTVKYRTRAQASIVDVLRVINITVRDTGRLVSVARS # PASA_UPDATE: g13554.t1, single gene model update, valid-1, status:[pasa:asmbl_1022,status:3], valid-1 NODE_1268_length_12555_cov_41.4716 . gene 9359 11234 . + . ID=g13554;Name=g13554.t1 NODE_1268_length_12555_cov_41.4716 . mRNA 9359 11234 . + . ID=g13554.t1;Parent=g13554;Name=g13554.t1 NODE_1268_length_12555_cov_41.4716 . five_prime_UTR 9359 9782 . + . ID=g13554.t1.utr5p1;Parent=g13554.t1 NODE_1268_length_12555_cov_41.4716 . exon 9359 11234 . + . ID=g13554.t1.exon1;Parent=g13554.t1 NODE_1268_length_12555_cov_41.4716 . CDS 9783 10979 . + 0 ID=cds.g13554.t1;Parent=g13554.t1 NODE_1268_length_12555_cov_41.4716 . three_prime_UTR 10980 11234 . + . ID=g13554.t1.utr3p1;Parent=g13554.t1 #PROT g13554.t1 g13554 MGLGGGVNAAAFSSVAYFCAGAAVGCGVTIIASRSLRPSSRKPLVDYPSSEVSDNVRRLADAVDAMRLVMEHTLEGGARKRGRSRDRASSLRSEDSDTDDIFTDALDNASETSGVSYASAWNGIDAHANGHESDTSPLSCSPPTASSMANGMGNGMGNGMGNGHSETSLGLLFRQVEALRDDGRMRETLEILRRCRAQHPKSVEVLWRLARAHYDVCETLPKGCEEKRQIVNEGVEIASLALQIDDRNPRSHRWYAIILSSKGDWDSTKEKIKNGFVFREHIEKAIELDPHDPTAHHLLGRWCYEVALLSWIERKAATAIFGAPPTATMDDALHSFLEAERLRPGVWKMNTLMVARSYLQKKDRGNAAEWLNRTLSLPTTTAEDRQAHEEATQLLKKL* # ORIGINAL: g13553.t1 original gene structure, not modified by PASA NODE_1268_length_12555_cov_41.4716 AUGUSTUS gene 5727 7910 . - . ID=g13553;Name=g13553.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS mRNA 5727 7910 . - . ID=g13553.t1;Parent=g13553;Name=g13553.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 5727 7910 . - . ID=g13553.t1.exon1;Parent=g13553.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 5727 7910 . - 0 ID=cds.g13553.t1;Parent=g13553.t1 #PROT g13553.t1 g13553 MDLVGVVSTAGELWLHRLSWQRVWTLPAGDKKDASITAIAWRPDGRAIACGRQNGSISIVDVESGVVRDVPAWRSPAEAVTEVTCLGWSDGCDDDSAVLSGQRCLGDDRARCLLTTTPDSEKDSSRAPGAGDGDTTAYGVGSLREPLDARMKLTVLSVGDASGCVHLLALGTFKLATLDMVALGSLPPLPSSQSYRVTSVSASRDLGTVLATLSTGDAAFAVVAASPLGPARRAELLNVVVRRERLRQLSSLCCASVGRMQELWEESLLKLSSKLRRYTNEVAGTGPPGFERTAERELLSFLLDGSTSPDLQGFIGRELAEAELKRIAAASEASCNAVHAAVSGDMWRAASSMCVAASDALGLARWEERYGMVGVRESAVEKCVDCAKRIIVKAEEAIVVLTEVRASMGALHTWLLYASRLVTNTQDAQRAAPVVRPAVDLSAIARLLRDGVGGTEASAAGNTYRRVAQYFETRPLAIPFKTGEDSLATAVEAADDAIAVAFAGVGQTLAASFTAAAVVPVPGRPAVDPSASPHPGEAGTVLCCLPVPSVPLCLAVLSVSSKPSRKQSFGIPPLAVTVSSVIIEMGITSSPLCDTIRHAHMHGSDSVVVLVGGADVSSPECSLILAKIPAFATLGHYATTDKRPFAVPSMWLDMLPPMPLGDQEGECRVRSLNDMRGGCASVYASSTRNVAVCVSNKRRKVRLLDLAEDEEEKSDDGEKDGDDDDDA* # ORIGINAL: g13552.t1 original gene structure, not modified by PASA NODE_1268_length_12555_cov_41.4716 AUGUSTUS gene 141 5143 . + . ID=g13552;Name=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS mRNA 141 5143 . + . ID=g13552.t1;Parent=g13552;Name=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 141 295 . + . ID=g13552.t1.exon1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 141 295 . + 2 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 480 658 . + . ID=g13552.t1.exon2;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 480 658 . + 0 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 868 1555 . + . ID=g13552.t1.exon3;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 868 1555 . + 1 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 1718 2080 . + . ID=g13552.t1.exon4;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 1718 2080 . + 0 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 2280 2441 . + . ID=g13552.t1.exon5;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 2280 2441 . + 0 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 2720 2969 . + . ID=g13552.t1.exon6;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 2720 2969 . + 0 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 3099 3367 . + . ID=g13552.t1.exon7;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 3099 3367 . + 2 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 3549 3781 . + . ID=g13552.t1.exon8;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 3549 3781 . + 0 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 3948 4849 . + . ID=g13552.t1.exon9;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 3948 4849 . + 1 ID=cds.g13552.t1;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 5067 5143 . + . ID=g13552.t1.exon10;Parent=g13552.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 5067 5143 . + 2 ID=cds.g13552.t1;Parent=g13552.t1 #PROT g13552.t1 g13552 ISSPSSVIFSDTAKEIRSVSISELGEWILANSTTFLKDSYIKYTGWMLHDKDFEVRLATLDVLHKLYAVDEFGAQLETFTQRFKDRLVGMLRDLNPLVIAKTVKLFIPLMRYNVFTEDDINAASVLVYHDNEKVSRAAGRFIGYRLEEDAAIANESNPKKSKDAKLAQSKATIVEIAKFHTAYSAINEHAAALVGGLWKHVAAVREWGAYTAILDAQQAEDGNTQASQRSQTSIGDGRLSVEEETSLLEVLLASVRRVVAVLGPVSGPPVPGVDVANRKALVGKEKETAVADIRTMTVSLARHVPELLTRYGADARKVPVIAGIAGCLDAPAMAENRLNKQLDSTIKLLQMVFEEHVEPDGLAELSAALKHFAANGNPAQSAALGAITSVASDAVAVVKQHLKSGLPKDDGSDHVDEDYFSLVTALRRYRAIRLHNDIGDIDAAIAAVLEKGAKAGSVHAEVLIPAIDCTIASLMWAVNKSQASLDADAFTLQRDQLVERCSGVLNAGNDVVCGAAFNAIMDAVAQSAALHKSLKSIADAKAAKKQAKGKGKADENKENRDANNASGDRDDSVYTLPAVVVRRCAHALKKLAFLPEHEGAHQVIQDMLKKREDAEDEVDALDARRMHVVGFVRAVMLGSVGAMEASLVLGRMGQFGDEYGDIAKALLVKLREKGAVDFGRVALESLKNSFETESISDDLKSEAAVDVARRFLAAFGGDSAPMHQALVDVHTGGIAYALGGDIARVRLFAALKELVPRLRQGDASIVLKSLDSQSLAKRPDKEDDDWYDYFAYRGYLLKVLKDPAALPAGASAIKSVRRSSQKPAVAAGSAVKKPRKPIGASQPSAQDRAKLMMSNVRNLRAALVPDAAEAASRKRRPPQEDSDEIEEFNDDDDISGDETTQVSKSAPQKGSAARGQGQQSPARKRLRMDEMEEDIDNDDDQDEDYGRSKRPKNASPKAHRKAAPPAKKGASKRPVPAADSESSEAEEEDEEAIAPPAKRSKASTPPSKKPLSLSLANRRKRSVDDADEEEVGVGVDGARRGRPEPARKRSRVIEQLVFEDEGISGPGNDSDDDNDIIEAPVARRGGRAGRK* # ORIGINAL: g13555.t1 original gene structure, not modified by PASA NODE_1268_length_12555_cov_41.4716 AUGUSTUS gene 11830 12399 . - . ID=g13555;Name=g13555.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS mRNA 11830 12399 . - . ID=g13555.t1;Parent=g13555;Name=g13555.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 12294 12399 . - . ID=g13555.t1.exon1;Parent=g13555.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 12294 12399 . - 0 ID=cds.g13555.t1;Parent=g13555.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS exon 11830 11891 . - . ID=g13555.t1.exon2;Parent=g13555.t1 NODE_1268_length_12555_cov_41.4716 AUGUSTUS CDS 11830 11891 . - 2 ID=cds.g13555.t1;Parent=g13555.t1 #PROT g13555.t1 g13555 VFVANPNKTKPILDILLKNKDKLIEFLTKFHNDRSEDEQFNDEKAYLIKQIKELA* # ORIGINAL: g2713.t1 original gene structure, not modified by PASA NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS gene 93 1651 . - . ID=g2713;Name=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS mRNA 93 1651 . - . ID=g2713.t1;Parent=g2713;Name=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS exon 1489 1651 . - . ID=g2713.t1.exon1;Parent=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS CDS 1489 1651 . - 2 ID=cds.g2713.t1;Parent=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS exon 1039 1206 . - . ID=g2713.t1.exon2;Parent=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS CDS 1039 1206 . - 1 ID=cds.g2713.t1;Parent=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS exon 93 402 . - . ID=g2713.t1.exon3;Parent=g2713.t1 NODE_4417_length_1651_cov_41.4169_potentialcontaminant AUGUSTUS CDS 93 402 . - 1 ID=cds.g2713.t1;Parent=g2713.t1 #PROT g2713.t1 g2713 KPVNTSLYNGPYGTAFKGTVTILDTSAPNHALRSLYFQGRNVARLPTMVLSNGTFPAGSGVTQFKSATRWRSWFGSAISSGKTAPNTIDSVVIGAFGTDLNNANSPRSTGVSYYDNGRVYLYAGRTGGVAPPQTAAVSQFGALTSVCQFGFSVGLGLANSTGHTRVVAGAINANSMGGMVVSYPRMGVLNDLGSTPGGSALGQYSSKWVVLS* # PASA_UPDATE: g12905.t1, single gene model update, valid-1, status:[pasa:asmbl_5446,status:3], valid-1 NODE_3026_length_4507_cov_43.032 . gene 1374 3403 . + . ID=g12905;Name=g12905.t1 NODE_3026_length_4507_cov_43.032 . mRNA 1374 3403 . + . ID=g12905.t1;Parent=g12905;Name=g12905.t1 NODE_3026_length_4507_cov_43.032 . five_prime_UTR 1374 1698 . + . ID=g12905.t1.utr5p1;Parent=g12905.t1 NODE_3026_length_4507_cov_43.032 . exon 1374 2073 . + . ID=g12905.t1.exon1;Parent=g12905.t1 NODE_3026_length_4507_cov_43.032 . CDS 1699 2073 . + 0 ID=cds.g12905.t1;Parent=g12905.t1 NODE_3026_length_4507_cov_43.032 . exon 2171 3403 . + . ID=g12905.t1.exon2;Parent=g12905.t1 NODE_3026_length_4507_cov_43.032 . CDS 2171 3244 . + 0 ID=cds.g12905.t1;Parent=g12905.t1 NODE_3026_length_4507_cov_43.032 . three_prime_UTR 3245 3403 . + . ID=g12905.t1.utr3p1;Parent=g12905.t1 #PROT g12905.t1 g12905 MYFPDVKSEQMATPIVTSPATGGAAPYAGVKKEDPASAAHARASHAATNRRRPAAAMSAQGDAEREEIAAFVNKLANMVNDPSCDNLISWTPTGTSFCVYKPPQFAKDVLPKFFKHNNFSSFVRQLNMYGFHKVVGVEQGSLNSDDDTWEFINPNFVRDHPELMREVKRKVAPDDKGKAFSGDIKRVVEELEQIKYQQAAITNKLDNIDKNNQSLWDGMLALRHRHQRQEQTIRKILQFLASVYSSDRSALNAPPEPVPTGPNKRRRLMIEAAPLGPPLMPSSIPLDGYSGQLEQPTSPYLSDVQIGGASFNAGGSTALPSIPLPAPVLPVITPTYAQLQSSPIGAARAEAVTGIPVASTVSVAEDINNVQREIDAFQQSLLDGSYGFDIADLASLSSPAPPQGNPPPPTTNFPIPLAVDLLEELSRLNAINGNALNLGGVTNGGNLVEYRQGMHDALASSDNHEDDDRYTDGEEIDETFSF* # ORIGINAL: g12906.t1 original gene structure, not modified by PASA NODE_3026_length_4507_cov_43.032 AUGUSTUS gene 3599 4021 . - . ID=g12906;Name=g12906.t1 NODE_3026_length_4507_cov_43.032 AUGUSTUS mRNA 3599 4021 . - . ID=g12906.t1;Parent=g12906;Name=g12906.t1 NODE_3026_length_4507_cov_43.032 AUGUSTUS exon 3599 4021 . - . ID=g12906.t1.exon1;Parent=g12906.t1 NODE_3026_length_4507_cov_43.032 AUGUSTUS CDS 3599 4021 . - 0 ID=cds.g12906.t1;Parent=g12906.t1 #PROT g12906.t1 g12906 MARGPSTAMAGQQPVVFGSSPSSNGGAFMMAFAAKTMQTDVVQRVPAFQHDAAHKDRQQVKNSNRRRRVVGAAAFAHPKNLAAEMKMRASRSVPAATRVSDSFDVPMDDQMVPASELTLSSHALFDMEHDFYSDEDAVGY* # PASA_UPDATE: g12904.t1, single gene model update, valid-1, status:[pasa:asmbl_5445,status:12], valid-1 NODE_3026_length_4507_cov_43.032 . gene 59 846 . - . ID=g12904;Name=g12904.t1 NODE_3026_length_4507_cov_43.032 . mRNA 59 846 . - . ID=g12904.t1;Parent=g12904;Name=g12904.t1 NODE_3026_length_4507_cov_43.032 . five_prime_UTR 766 846 . - . ID=g12904.t1.utr5p1;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . exon 693 846 . - . ID=g12904.t1.exon1;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . CDS 693 765 . - 0 ID=cds.g12904.t1;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . exon 401 585 . - . ID=g12904.t1.exon2;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . CDS 401 585 . - 2 ID=cds.g12904.t1;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . exon 59 286 . - . ID=g12904.t1.exon3;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . CDS 269 286 . - 0 ID=cds.g12904.t1;Parent=g12904.t1 NODE_3026_length_4507_cov_43.032 . three_prime_UTR 59 268 . - . ID=g12904.t1.utr3p1;Parent=g12904.t1 #PROT g12904.t1 g12904 MIRAVVKKHVPSIRFPQRRGADGKPKEALSTDFFRNSTVSASPPSSASSWKATPPPVYSPNAIDPEQLPATYGRKAISTSEIAAVELGGAW* # PASA_UPDATE: g13260.t1, single gene model update, valid-1, status:[pasa:asmbl_4672,status:12], valid-1 NODE_2622_length_5630_cov_232.294 . gene 2 2048 . + . ID=g13260;Name=g13260.t1 NODE_2622_length_5630_cov_232.294 . mRNA 2 2048 . + . ID=g13260.t1;Parent=g13260;Name=g13260.t1 NODE_2622_length_5630_cov_232.294 . five_prime_UTR 2 2 . + . ID=g13260.t1.utr5p1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . exon 2 131 . + . ID=g13260.t1.exon1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . CDS 3 131 . + 0 ID=cds.g13260.t1;Parent=g13260.t1;5_prime_partial=true NODE_2622_length_5630_cov_232.294 . exon 227 289 . + . ID=g13260.t1.exon2;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . CDS 227 289 . + 0 ID=cds.g13260.t1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . exon 747 854 . + . ID=g13260.t1.exon3;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . CDS 747 854 . + 0 ID=cds.g13260.t1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . exon 1048 1216 . + . ID=g13260.t1.exon4;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . CDS 1048 1216 . + 0 ID=cds.g13260.t1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . exon 1319 2048 . + . ID=g13260.t1.exon5;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . CDS 1319 2031 . + 2 ID=cds.g13260.t1;Parent=g13260.t1 NODE_2622_length_5630_cov_232.294 . three_prime_UTR 2032 2048 . + . ID=g13260.t1.utr3p1;Parent=g13260.t1 #PROT g13260.t1 g13260 VNIKDAWTRVKMAALVHGVASHLAATFQLAPSLHETAMIVHPMASFSDTALNSEYLKGGNGQAEGPMLRQQLLANVTDESKKEMAQLAAKISDNLSSGHLTNKALIKLCKEAGFQRSSSCNREELEQMLTRYVGEVHAIVWDTPFIKAFPSSGHKSGGLYSAVCPHRMATAVKPLERGEGMGDGADVMRSLKHPATVFVYDAADNLALYANKIEPLLIPSPDLGRLDAVGANEWQHKLVCHGDPSDDQAATPIELPEGLSRFEMPHPLTRTAVRKIVYDGFHLTNSTNPRDAQRDPKLLLSGTRGHLNTPAAEQFNKALGERALHLNKLSFSRFLLLQRSRIIGLNRVKAAAMLRRMRQELDKSEAAYIVDSHPRWGYAVFTQKTVDDEEMAD* # PASA_UPDATE: g13261.t1, single gene model update, valid-1, status:[pasa:asmbl_4673,status:12], valid-1 NODE_2622_length_5630_cov_232.294 . gene 2484 4581 . - . ID=g13261;Name=g13261.t1 NODE_2622_length_5630_cov_232.294 . mRNA 2484 4581 . - . ID=g13261.t1;Parent=g13261;Name=g13261.t1 NODE_2622_length_5630_cov_232.294 . exon 4537 4581 . - . ID=g13261.t1.exon1;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . CDS 4537 4581 . - 0 ID=cds.g13261.t1;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . exon 4285 4344 . - . ID=g13261.t1.exon2;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . CDS 4285 4344 . - 0 ID=cds.g13261.t1;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . exon 3821 4180 . - . ID=g13261.t1.exon3;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . CDS 3821 4180 . - 0 ID=cds.g13261.t1;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . exon 2484 2868 . - . ID=g13261.t1.exon4;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . CDS 2542 2868 . - 0 ID=cds.g13261.t1;Parent=g13261.t1 NODE_2622_length_5630_cov_232.294 . three_prime_UTR 2484 2541 . - . ID=g13261.t1.utr3p1;Parent=g13261.t1 #PROT g13261.t1 g13261 MGIVSKTLTCISRSAAPSGSIAKQVESTPPAHHCKQFNLCLQTPGTIVITEGATHCGLTLGGLNIAFNIAPLRTWTMRLQEWDRARAIYRQKVAQDVLSTPTSRQQRLERWICIDSGTGYSRPIFSAEALLFKAFTDHTLCQREVVEFCARRSKQELSARQHIGILLPTALDAGVFKDGAAAQRRLLSQLLGQSLDSVSSQHYCDLCTADLYLSAAKISIECVTPMHVCLCCLSMVVEVATSDKTLSLSLINISYRSGLQAYL* # ORIGINAL: g11689.t1 original gene structure, not modified by PASA NODE_2592_length_5761_cov_82.503 AUGUSTUS gene 3325 5706 . - . ID=g11689;Name=g11689.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS mRNA 3325 5706 . - . ID=g11689.t1;Parent=g11689;Name=g11689.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS exon 3325 5706 . - . ID=g11689.t1.exon1;Parent=g11689.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS CDS 3325 5706 . - 0 ID=cds.g11689.t1;Parent=g11689.t1 #PROT g11689.t1 g11689 MHATESVVDGAAQSAGNEDAADIKCGENVIRDDCLLSTETTTSPLMQSGHHSGTAVALPSEEPSLEALTAESMGALSHEADTAVASTPSVDTQSSLSPLPQQAADDGPRDGPNVNLVSDGETCEFPNDDTVAGSHAPDASTTTALITGGESAHMDDVPTEMTHSLPPTPTLRSARRAAPVDSRNASEYGDVSDDSESVATSYHTDEASPKHSDSKRSESRRKNDMADLAQSSPESGQRGGVVSLDELPDEIGELINALIHEKEELLSKTDELGTSHTALSRELESLRRKYEKLQKEKRSPSAPTDGNGERGLLPGTGGYGRVRRVDLSDSIERRFNKLAGNCIREDTAAGGGLNRMKPLDFEKLALENERLRALEQDAERKKAALSKENRELKRKLVDVTRADRVSAETSPASSSAATAQTGTKGAVLKKRAAVPASAGPKVPSIALLSLTSEAWTRVSTKQRTISARPDEAKTTSVAGRSASDGDGGIKALDNTKELTGTKAGREAKNVKSSVALPLPRDSIPRPSSVPRGTLLSTNSNKLARGAASGVASERLTATAVKTKAATNVAAQGAANVSVPKPSSSVSDVGSTRKIESVRTAGVHVAPPTASSASAGKSQVAISSLDGTAAGKEDKVARSGKERMAETTFGKERPTAAIFGLAGTSAKPSGPTVSAREMHAMHGEATDTVSPHMSATAPVSATRTDAATPVSPSAASLISGAASDYFFSDAETLHQSPTASFSVNPRPPKMDQSRAHVTHGRLARARLAASSRTPSLSDSMDGGDAYDMRGSRGQ* # ORIGINAL: g11688.t1 original gene structure, not modified by PASA NODE_2592_length_5761_cov_82.503 AUGUSTUS gene 337 2087 . + . ID=g11688;Name=g11688.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS mRNA 337 2087 . + . ID=g11688.t1;Parent=g11688;Name=g11688.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS exon 337 856 . + . ID=g11688.t1.exon1;Parent=g11688.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS CDS 337 856 . + 0 ID=cds.g11688.t1;Parent=g11688.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS exon 1063 2087 . + . ID=g11688.t1.exon2;Parent=g11688.t1 NODE_2592_length_5761_cov_82.503 AUGUSTUS CDS 1063 2087 . + 2 ID=cds.g11688.t1;Parent=g11688.t1 #PROT g11688.t1 g11688 MAGIVSLFSIPIEVVERHLLPYHSNKDRASLAGVNSRLRCVLRHVRLYTLRDAFPQLYWASEAFRNAVCADIPRERLVLHFNAQTTDLDVSVLSGVHSVDLKNCIGVTDVSALGNVHTLNISGCEEVTDVSELGGVHTLNISGCNGVTDVSALGGVHMLNICGCEGVTDVSALGCDGVTDVSALGGVHSLNISFCEGVTDVSGLGGVHSLSISGCEGVTDVSALGRVHTLNISGCEGVTDVSALGGVHSLDLSYCHGVTDVSALGGVHSLDLSYCHGVTDVYELGGVHLLDLSNCHGVTDVSALGGVHSLDLSYCHGVTDVSALGGVHSLNLSYCNGVTNVSALGGVYSLNLTDCNGVTDVSALGGIHSLNLSCCFGVTDVSALGCVHSLNLTNCNGVTYVSALCGVHSLDLSYCHGVTDVSALGGVHSLDLSYCHGVTDVSALGGVHSLDLSYCHGVTDVSALGGVHSLNLSFCKAVTDVSALGGVHSLDLSYCYGVTDVSALNSAYRFFTVE* # ORIGINAL: g7347.t1 original gene structure, not modified by PASA NODE_3435_length_3467_cov_40.5106 AUGUSTUS gene 456 2806 . - . ID=g7347;Name=g7347.t1 NODE_3435_length_3467_cov_40.5106 AUGUSTUS mRNA 456 2806 . - . ID=g7347.t1;Parent=g7347;Name=g7347.t1 NODE_3435_length_3467_cov_40.5106 AUGUSTUS exon 2644 2806 . - . ID=g7347.t1.exon1;Parent=g7347.t1 NODE_3435_length_3467_cov_40.5106 AUGUSTUS CDS 2644 2806 . - 0 ID=cds.g7347.t1;Parent=g7347.t1 NODE_3435_length_3467_cov_40.5106 AUGUSTUS exon 456 2488 . - . ID=g7347.t1.exon2;Parent=g7347.t1 NODE_3435_length_3467_cov_40.5106 AUGUSTUS CDS 456 2488 . - 2 ID=cds.g7347.t1;Parent=g7347.t1 #PROT g7347.t1 g7347 MRHINLPHVPKVAGRWRVNGQPGALRMRGVTFMLSLLIVVVTFMGILVTYSSISESEFEDTTGLPSEFPGGGGIHKGDHHVGGGAKRGARDSEEEAAPVSDKQYACMAPSVANPFPPEQRKVVLVTGGAGFVGFHSVLRLREENAYVVVLDTLTLYKRGDRGTGIKRKRAEILEAAGARVIEGNLCDGNLVQGLFAESFFTHVVHLAGPEATWRDSFDGFDDAVDSMSECLVVLLQAIRKQEPPPALIYGSSADVYGHPDMTSPIVADAERLADPSATWSLWREGNRCDAPATVFAAMARAQEAIAFTYHHLYDVPVTGLRIAHAYGAWDRPNGAVARAVNRALTGQEDAETLRALEYVPVEDVADAVVRAADMRYTCNLFNVGSGVSLSARELFDRISDVVATIPVEQKGSMSVLGQRPTDSGSSNSSLRAIPMSLEHSAAGLGYAPFSSMQDNGAVEAGGIGSALAATLTRAIEWHVATMHEYEQSTREVVMACYFTSQRDPQRKHFISPNRRSYIDRWLETLEEIGHDGVIFHDGLSPEFVDMYRGRRVEFVRADLMGRSTNDARFYLYREWMIRNRGIRRVIMSDVSDVHFLRDPFRFMEFIGDDRVYVGSDIEVFPNMATMGWLKPRIKSCFGGDEYWADEIAVILGLNVVYNAGLLGGTVEKMMQVLDKIVEVLDRTPANINCNMPVLNYVLHRFFQHDVYSGFPLNSRFMMSQRNPRGVYIVHK* # PASA_UPDATE: g9334.t1, single gene model update, valid-1, status:[pasa:asmbl_1571,status:12], valid-1 NODE_1432_length_11354_cov_58.8503 . gene 7477 10678 . + . ID=g9334;Name=g9334.t1 NODE_1432_length_11354_cov_58.8503 . mRNA 7477 10678 . + . ID=g9334.t1;Parent=g9334;Name=g9334.t1 NODE_1432_length_11354_cov_58.8503 . five_prime_UTR 7477 7490 . + . ID=g9334.t1.utr5p1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 7477 7621 . + . ID=g9334.t1.exon1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 7491 7621 . + 0 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 7805 7967 . + . ID=g9334.t1.exon2;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 7805 7967 . + 1 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 8240 8331 . + . ID=g9334.t1.exon3;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 8240 8331 . + 0 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 8685 8781 . + . ID=g9334.t1.exon4;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 8685 8781 . + 1 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 9359 9413 . + . ID=g9334.t1.exon5;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 9359 9413 . + 0 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 9784 9858 . + . ID=g9334.t1.exon6;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 9784 9858 . + 2 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . exon 10183 10678 . + . ID=g9334.t1.exon7;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . CDS 10183 10292 . + 2 ID=cds.g9334.t1;Parent=g9334.t1 NODE_1432_length_11354_cov_58.8503 . three_prime_UTR 10293 10678 . + . ID=g9334.t1.utr3p1;Parent=g9334.t1 #PROT g9334.t1 g9334 MSMGSLPGKMHEPPPAERRVLCVPHVMQTGQWDCGLACADMVIRYAAGIEVDVREMYADLSPNDSVWTIDLAYILRGCGIRIKFTTETLGVQDSYAAESFYQSAFDTDSARVNRLFAKAAALDVSVEKRALSCEEITSHIEGGGPAIVLVNGGLLRCQHCWRDHPAELRDSASASVEYTGHFIVACGFDPALSTIYYKDPSSLHETCYISATAFDRARHSFGTDDDVILVHVAHASSVRD* # ORIGINAL: g9333.t1 original gene structure, not modified by PASA NODE_1432_length_11354_cov_58.8503 AUGUSTUS gene 1093 6494 . - . ID=g9333;Name=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS mRNA 1093 6494 . - . ID=g9333.t1;Parent=g9333;Name=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS exon 2409 6494 . - . ID=g9333.t1.exon1;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS CDS 2409 6494 . - 0 ID=cds.g9333.t1;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS exon 1914 2091 . - . ID=g9333.t1.exon2;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS CDS 1914 2091 . - 0 ID=cds.g9333.t1;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS exon 1575 1783 . - . ID=g9333.t1.exon3;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS CDS 1575 1783 . - 2 ID=cds.g9333.t1;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS exon 1093 1338 . - . ID=g9333.t1.exon4;Parent=g9333.t1 NODE_1432_length_11354_cov_58.8503 AUGUSTUS CDS 1093 1338 . - 0 ID=cds.g9333.t1;Parent=g9333.t1 #PROT g9333.t1 g9333 MASLSRASSFGDAHSNLSQVLDIGNNTSEADRSDNEDIFQETDLPPTNAPPRRRQSVLNTVVNVVRGVVSRLSVTSMGIPPTPGRTSVVSIGRLPAVPQIKFDDQIWKDATPVPAGASALEAAHVHYKDSVEDGSAVAERLLSGTDSHVLDPRWLVFAGGLECQYLESRTETTPTHFRALSFLAFLLFSGFVLFTHVRPPFENDADSFVRAAYRTDASHYASVAGAAAGLLLVGLSYTGAFVVAQRRMSRVLLTVAPFLVGLTCLFVQRFMVEDPSFSGAWILLIVTIPLIRERMTLATAALLVTCALNIAQVVLSPHSNADSRVMTLLPMSLSALFPAIAVYTIDRRLRWQWLAMRNAEATRENLKREKDQMEKLLSHQLPAPIIARVRLQADAKGLGLSGSLNPSSHGKPRRPQGSVNIGHAEIAERFPGVTVIFVELAHWYDRTQSIAPDKAVAILNAIFTRFDTLTEVYGVEKIKTMGPSYLACVGAPVVRDNHTEIVTRFALNLLGEWAEEGEKLGLDLRIGIHVGEVVAGIVGTLRFCYDIYGDTVNTASRMCKHSPENKIHCTQEVYDILVKTGHFSFICAGASDFKGKGSLTTYYITGCNEDVSHLVHANAALSTHSTMSPPMSPVSEGSTRRHSTSTGLTMSTTQGSKQTVSSSEYSAALANFSETIRISHFLDDDPTMVNAQVAAMMAALSPRGSFSMPVLAMLPPGSAGNGGGNGTSNPHSQAAAGHDRPDGTVSVAVFGPQDDDGRPTLVRTKSSHSAVSRRSFSVGDTPPSFSTGGINTSLPGATATDTLAAIRHARSNESQHSGSSSSGSGVHVNGWTSGGVQREWSVESASGAALDRKEQSSSEGDVTSTTATGALVRRQGSMPRLPRSMSGRDLTPFAEEAHDDAGDRAGEQALPNIERTASSFVDSMASSTSIIEEGEDELGEDDDSRASFTIDGAVEAYGGNFVSADRYGHGDGPRLSSHLAAQAHRGSFSRGESLTPFRKLSHLSAAGATTDEALVHLEQAMRSSNVGRKSSDMGAAAAAAVATRNALVMTGGALTSAKRSATSSSLISRDFAMKLALSKGHVSGQHANRAAKMSRLTLSFRDRSVEHAFRLNGALHSRRLTAVYFACAWAFMMVLVAVDVLSRPRALYGSEATLRFALVRAIVGTVAAVACCVGILRKMKRSSVGSTDSMPSFPPRAGLESLSERRMVMASRESQPIVIAFLCVYIALLLGLQITNGALENSTLCGMDAALLYVDCILLGVPSILFKTLLFFGGAYALFVVVILAVGSTSLNLATGILCCSTLFIVCVTHYVFERRQRRQFSVDMQTCEQEMRVRSEKRVGEQLLFNILPASIAQMLADNSQSNTARSFSAVTVLVMDIAGFTAMSSAMTAPEVVRLLNDIFNRFDERVNSYDDIEKIATIGDAYIAASGVPQPCADHAFQICSLGVDMLLAVVEYNDEQRGASQSSAGAHVRVRIGIHSGSCIAGILGGKIRFKYDLYGDAVHVAQTLEQTGVPGCLHVTRETLALIEPMRLLSIHQFTADDRPEPVAIHENGIERVVRTVLLHHIIPENP* # ORIGINAL: g63.t1 original gene structure, not modified by PASA NODE_2535_length_5982_cov_36.4848 AUGUSTUS gene 129 5701 . - . ID=g63;Name=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS mRNA 129 5701 . - . ID=g63.t1;Parent=g63;Name=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 5639 5701 . - . ID=g63.t1.exon1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 5639 5701 . - 0 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 4983 5193 . - . ID=g63.t1.exon2;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 4983 5193 . - 0 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 4132 4200 . - . ID=g63.t1.exon3;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 4132 4200 . - 2 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 3538 3739 . - . ID=g63.t1.exon4;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 3538 3739 . - 2 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 2578 3080 . - . ID=g63.t1.exon5;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 2578 3080 . - 1 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 1616 2071 . - . ID=g63.t1.exon6;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 1616 2071 . - 2 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 873 1310 . - . ID=g63.t1.exon7;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 873 1310 . - 2 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 380 598 . - . ID=g63.t1.exon8;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 380 598 . - 2 ID=cds.g63.t1;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS exon 129 172 . - . ID=g63.t1.exon9;Parent=g63.t1 NODE_2535_length_5982_cov_36.4848 AUGUSTUS CDS 129 172 . - 2 ID=cds.g63.t1;Parent=g63.t1 #PROT g63.t1 g63 MRITNATGDAGVYTIMCNLLVSELGTFYEMQFFPEMYGDGVSFKGLLSPRTDGTGMVALADVALQLDGCAGGDPSYYTSSDVLLAQMEFTRVVPATSSTSVVTATSTVAAPTNTGPSYRSIVVAAGPLLYIPFMLNDFLGDKYPLSVVLASPATQMALSSNLIADPTVGGFGASLSLNNNNAVKLNFAGIFSGGISVEFWISMESFPANPLQLISLDNIPATDLPAVKIVLGTDSTLVLTFNMRFSDNIVLESTFSMNPKFVPKVASHVIVSLSFTTGLLTVFVNGESLFATVVKRGPMNSAFSLTLWTSSGDGLGSSSIDEVAVYDYDIPVEIATAHSACGKGKACVPVMCGSRSHSRSPCPLFITSSFWRGFALDEDGLSPLLPRPRFLEYNNVTSTLTHSVFDSRNFNPSKTSSFMFCPSFNAAAETASIDIVGIPGVSGEIVSLPPVYRATAVVSASGVMRLSLMDSSAIACPAYPDTTRNPFQAQGVELSVLRLRKDLACSQDKSDGSCSLDNYCTPPKTVKCPAALNGNFRGTIFSAGQSTQEAFLSISDDAGKLIVVVPGTGNVTIPVTIRCDGTQFDGVTYSAKLFMQSSLTGRFNPMPAAWTFASTQLKSMSLVLEYPGACTQPSIPNGRYLLAMSMDRTSSCVEENANIVATASSHLDPYAACVGIGSLNLTGYRDSSLPSLSASRVSGSITIRNTELVNLSAFKFVKDIEVLVVVALKNLPVT* # ORIGINAL: g8045.t1 original gene structure, not modified by PASA NODE_1576_length_10378_cov_38.1996 AUGUSTUS gene 46 1037 . + . ID=g8045;Name=g8045.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS mRNA 46 1037 . + . ID=g8045.t1;Parent=g8045;Name=g8045.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 46 605 . + . ID=g8045.t1.exon1;Parent=g8045.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 46 605 . + 0 ID=cds.g8045.t1;Parent=g8045.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 848 1037 . + . ID=g8045.t1.exon2;Parent=g8045.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 848 1037 . + 1 ID=cds.g8045.t1;Parent=g8045.t1 #PROT g8045.t1 g8045 GHSAPDFSSWMKQAKRYAEGSAQLFLETLLPHMATEAEMGTKNATQSSQQTHLPLRVRIFYALLSGNNLLGPFHCMMMADPIVRVCLRIQPPSGNAVHLACLIACMVAAECIRYHPHLASLLRRKQTYCILAHPLTLGWAAFLGRPVRFVPTMSAEAQGSVRLYAHLMYIAVAVTSLLGALWLDTRSLRAALVALTIAPVVALIHFGGSWRHVRRAKSLYWTPYASLAIASVVMLATRQPVGVLWMAYH* # ORIGINAL: g8046.t1 original gene structure, not modified by PASA NODE_1576_length_10378_cov_38.1996 AUGUSTUS gene 1418 5388 . - . ID=g8046;Name=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS mRNA 1418 5388 . - . ID=g8046.t1;Parent=g8046;Name=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 5329 5388 . - . ID=g8046.t1.exon1;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 5329 5388 . - 0 ID=cds.g8046.t1;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 4921 5183 . - . ID=g8046.t1.exon2;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 4921 5183 . - 0 ID=cds.g8046.t1;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 4696 4756 . - . ID=g8046.t1.exon3;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 4696 4756 . - 1 ID=cds.g8046.t1;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 1418 4462 . - . ID=g8046.t1.exon4;Parent=g8046.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 1418 4462 . - 0 ID=cds.g8046.t1;Parent=g8046.t1 #PROT g8046.t1 g8046 MATVARDGSITVELTEDELKALDEFKRLLVSKRKGEGRNDAFLLRFLTARKLEVERAFELYCNYETLSSKYRLDGLRAADVHQQLSAAEVVIPNAYDRDGARVVIFYGKLHNAYKYNAADTLRTVMYQVWLALDDIQTQRKGFTIVSAMDGSGYGNFDRHMYRLVLGSFQNNFPARINRVLILDPGRFISFFLALARPFMKAKLREKIRVVRGRQRLVEHIERSSIPTELGGDNMFDVATFVRARMEVEGAPAGGPSASSPATALRTTATSELSSSAPLSAVAESEARPGSAAVAAERKTKGANEEAERKAKEEAVRAEAERKANEEAVRAEAERKAKEEAERAEAERKAKEAVRAEAERKAKEEAERAEAERKAKEEAERKAKEEAVRVEAERKAKEEAERAEAERKAKEEAERAEAERKAKEEAERKAKEEAERTAAERKAKEEAERAESERAEAERKAKEEAERKAKEEAERKAEEAERAESERAEAERAESERKAKEEAERKAEEEAERAEAKRMAKEEAERAEAGRKAKEEAECAEAELKAKEEVERVEVERAEAERKAKEEAERAEAERKAKEESERAEAERKAKEEAERVEAERKAKEEAERAEAERKAKEEAERKVKEEAERAEAERKAKEESERAVAERKAKEEAERAEAERKAKEEAERKAEEEAEREANEEAERKATEEAERKAKEEAERAEVERKAKEEAERAEAERKAKEEAERAEAERKAKEESERAEAELKAKEEAERAEAELKAKKEAERAEAERKAKEEAERAEAELKAKKEAERVEAERAEAERKAKEEAVRSEAERKAKEEAERAEAERKAKDEAERAEAERKAKDEAERAEAERKVKEEAERAVSERKAKEEAERAEAERKAKEESERAEGVRVEAERKAKEEAERKAKEESERAEAVRVEAERKANEEAERKAKEESERAETERKATEAAERKAKEEAERKAKEEAERKAKEMSDHKSALAADAGDNSLPSLDGALLPPTKKTDRNTLPKKRMPSRQHIKDTFKRQEFPDSYVDDTHTTKDDSAVAVPRPVSATAAAGAKRPMSLPPGAMPMFGGFDPSKVPLKKRAEEGGDSATAQPASRAEGETAADPPKAAKKPPAGAMPMMGIGAFDPSAVKLKPRK* # ORIGINAL: g8047.t1 original gene structure, not modified by PASA NODE_1576_length_10378_cov_38.1996 AUGUSTUS gene 9370 9702 . + . ID=g8047;Name=g8047.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS mRNA 9370 9702 . + . ID=g8047.t1;Parent=g8047;Name=g8047.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS exon 9370 9702 . + . ID=g8047.t1.exon1;Parent=g8047.t1 NODE_1576_length_10378_cov_38.1996 AUGUSTUS CDS 9370 9702 . + 0 ID=cds.g8047.t1;Parent=g8047.t1 #PROT g8047.t1 g8047 MKREGSEEAVRPVAVVGARDMPGRADSNYVEKRASLSPVTDDRTRGDAAGGTRTGEGTTESNGGQSTAGSAERENDGSTTDSGGERGNNGKDEDIYEEGQSHNFLHKLNQ* # PASA_UPDATE: g8668.t1, single gene model update, valid-1, status:[pasa:asmbl_9197,status:12], valid-1 NODE_751_length_18146_cov_44.0944 . gene 5578 7143 . + . ID=g8668;Name=g8668.t1 NODE_751_length_18146_cov_44.0944 . mRNA 5578 7143 . + . ID=g8668.t1;Parent=g8668;Name=g8668.t1 NODE_751_length_18146_cov_44.0944 . five_prime_UTR 5578 5663 . + . ID=g8668.t1.utr5p1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 5578 5852 . + . ID=g8668.t1.exon1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 5664 5852 . + 0 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 5935 6010 . + . ID=g8668.t1.exon2;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 5935 6010 . + 0 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 6101 6285 . + . ID=g8668.t1.exon3;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 6101 6285 . + 2 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 6378 6459 . + . ID=g8668.t1.exon4;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 6378 6459 . + 0 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 6578 6792 . + . ID=g8668.t1.exon5;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 6578 6792 . + 2 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 6881 6970 . + . ID=g8668.t1.exon6;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 6881 6970 . + 0 ID=cds.g8668.t1;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . exon 7093 7143 . + . ID=g8668.t1.exon7;Parent=g8668.t1 NODE_751_length_18146_cov_44.0944 . CDS 7093 7143 . + 0 ID=cds.g8668.t1;Parent=g8668.t1 #PROT g8668.t1 g8668 MSLSALSVRLACRISGLAGPNRMRIASRLVCGPTNTTVVRHGSFSAWAAVKTIRTSSQSPRNWIYWTMGAGALCIPLGVALSEAAESDDPVTVEPSTKTKVPNEIDTVVGKQSIVGVGVRILPWIRVRPYVVALYVASAKNELAKLKVWKDKESEIESREFVNHLTSASAPKLALSIVSCRETGVAHLRDGFARALTNRANKLSTVDEQRAAVEDIDAFKKCFPKGNFSKGNVMNFVYAAPGVLKIFFQGEDMGTINSQFVCASLLEAYLDPQNPISPSARQSIVAGFKAICSNL* # PASA_UPDATE: g8670.t1, single gene model update, valid-1, status:[pasa:asmbl_9196,status:3], valid-1 NODE_751_length_18146_cov_44.0944 . gene 13583 17043 . - . ID=g8670;Name=g8670.t1 NODE_751_length_18146_cov_44.0944 . mRNA 13583 17043 . - . ID=g8670.t1;Parent=g8670;Name=g8670.t1 NODE_751_length_18146_cov_44.0944 . five_prime_UTR 16903 17043 . - . ID=g8670.t1.utr5p1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . exon 16826 17043 . - . ID=g8670.t1.exon1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . CDS 16826 16902 . - 0 ID=cds.g8670.t1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . exon 14418 16605 . - . ID=g8670.t1.exon2;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . CDS 14418 16605 . - 1 ID=cds.g8670.t1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . exon 14132 14241 . - . ID=g8670.t1.exon3;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . CDS 14132 14241 . - 0 ID=cds.g8670.t1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . exon 13583 13930 . - . ID=g8670.t1.exon4;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . CDS 13792 13930 . - 1 ID=cds.g8670.t1;Parent=g8670.t1 NODE_751_length_18146_cov_44.0944 . three_prime_UTR 13583 13791 . - . ID=g8670.t1.utr3p1;Parent=g8670.t1 #PROT g8670.t1 g8670 MADQDQNAVLISELCASDGQLGPTLRAVYDGGRHESFMETLDTFIQRMDAEIEKMCNHNYQGFIESVDELLKVRADAVRLRELITASDESRQATGKFLLGKAQELMEARVVLRNVVTAIESLNTCRPVLQLYTKAVEQLQQKKYYPALKALDQLEKQHLPRVSQYGFASQLHARIPLLRKRIKATVLSDLQDWLAKIRKQSTELGRTAMDETKVMMRALNADDKESASTALSASTAPGTSGTGSTPRGRTATTVGAQRRPKGFLFKAREDPIEVGVGIGGGASGTQDAGAKSTEASGGQPSSQSSQSMSSGEVVEFSAVYRCLHIFEVLGCRSEFEAYYKEARRQQASLVLQPLVQAQSSSADTFSSCKDHFYQVVGFFLVENTVINTTQALLTQGALDESWEIAITQISAFLQIQSNCCGSASLLLEVKEFMVLFCQTLQINGYNVTRLLDLLLEMRDGYTDILMRDWEARLRAAIAADTYEPMQVKSLREFETLQVEYPHTDPPGPVRLFPSSLPFSASVPKIYTEIREFAYAALKFVDQLHLSHTETDDMVRRAANRFLGKTVKEAMIHAIDSATSNVSQLVQITINAGCLAHVAPQLDVFVASLTRTVSDGAHVIRLIGPQVFKEARQLGEEAVLRRVRGKVDDFFTLASYNWTATKGEDSPSEYMVDLITFLRTTFGTLSAFQSEYVDAAYATACEHLVTRLISLLTSDNVKRMHISVFDTLAKDVTLCEAFAQDCPIASIKEHFYPLRQMITLFVKWDFSNFLLEEKRKYLYPRVYTPTVVTLLEKLKEEDSIKFSFMRSAPPNKNKEIDVIVKNLRDLIALQQHLQQQAK* # PASA_UPDATE: g8667.t1, single gene model update, valid-1, status:[pasa:asmbl_9195,status:3], valid-1 NODE_751_length_18146_cov_44.0944 . gene 3108 5275 . - . ID=g8667;Name=g8667.t1 NODE_751_length_18146_cov_44.0944 . mRNA 3108 5275 . - . ID=g8667.t1;Parent=g8667;Name=g8667.t1 NODE_751_length_18146_cov_44.0944 . five_prime_UTR 5164 5275 . - . ID=g8667.t1.utr5p1;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . five_prime_UTR 4806 4915 . - . ID=g8667.t1.utr5p2;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . exon 5164 5275 . - . ID=g8667.t1.exon1;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . exon 4679 4915 . - . ID=g8667.t1.exon2;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . CDS 4679 4805 . - 0 ID=cds.g8667.t1;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . exon 4306 4548 . - . ID=g8667.t1.exon3;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . CDS 4306 4548 . - 2 ID=cds.g8667.t1;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . exon 3108 3821 . - . ID=g8667.t1.exon4;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . CDS 3427 3821 . - 2 ID=cds.g8667.t1;Parent=g8667.t1 NODE_751_length_18146_cov_44.0944 . three_prime_UTR 3108 3426 . - . ID=g8667.t1.utr3p1;Parent=g8667.t1 #PROT g8667.t1 g8667 MGNCKSQGATSAVAPVTTPSLAVQAAVQAVQEQRLSFQADRRVSENGALFGKNVPLRKVGRPWKSDVLMTRKELQRKRLEFWDTSPAFGGRKEIWDALRAAVETEDRALAQAILDGASISLPTGQLTDAYDELGHKYTIPMYCLSDPSNLIESINAGEAATDANGEVLPPGQKSGEERSIKLRLSTNKDLKLKVDVLDTIGEIKLRIEKDEGIAPADLRMFFGGKELDDMLTIRTLNVPPGFMIQAIVRARPAA* # ORIGINAL: g8666.t1 original gene structure, not modified by PASA NODE_751_length_18146_cov_44.0944 AUGUSTUS gene 60 2507 . + . ID=g8666;Name=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS mRNA 60 2507 . + . ID=g8666.t1;Parent=g8666;Name=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 60 318 . + . ID=g8666.t1.exon1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 60 318 . + 0 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 490 681 . + . ID=g8666.t1.exon2;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 490 681 . + 2 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 871 993 . + . ID=g8666.t1.exon3;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 871 993 . + 2 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 1274 1389 . + . ID=g8666.t1.exon4;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 1274 1389 . + 2 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 1614 1739 . + . ID=g8666.t1.exon5;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 1614 1739 . + 0 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 2013 2131 . + . ID=g8666.t1.exon6;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 2013 2131 . + 0 ID=cds.g8666.t1;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 2375 2507 . + . ID=g8666.t1.exon7;Parent=g8666.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 2375 2507 . + 1 ID=cds.g8666.t1;Parent=g8666.t1 #PROT g8666.t1 g8666 VYNPRIRVESLLVTAISRASAQQRAGRAGRTQPGKCFRLYTEKAFKKELIEQTYPEILRSNLGSVVLQLKKLGVDDLVHFDFMDPPAPETLMRALELLNYLGALNDDGDLTSLGSIMSDFPLDPQLAKMLIASADFQCSNEILSITALLSVPQVFMRPKDQKKLADEAKNKFSHVDGDHLTLLNVYHAYKHNQSDVNWCYENFLNHRSLKSADNVRAQLQRFMEKHKLRLVSTDFSSKEYYVNIRKTLVSGYFMQVGHLERTGHYLTIKDNQVVQLHPSTCLDHKPEWVLYNEFVLTSKNYIRTVVEVKPEWLVEIAPQYYDMSNFPMCEAKRILERIIERNKQKKSGGRSDNRG* # ORIGINAL: g8669.t1 original gene structure, not modified by PASA NODE_751_length_18146_cov_44.0944 AUGUSTUS gene 7480 13372 . + . ID=g8669;Name=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS mRNA 7480 13372 . + . ID=g8669.t1;Parent=g8669;Name=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 7480 7503 . + . ID=g8669.t1.exon1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 7480 7503 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 7586 7744 . + . ID=g8669.t1.exon2;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 7586 7744 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 7842 8014 . + . ID=g8669.t1.exon3;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 7842 8014 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8128 8200 . + . ID=g8669.t1.exon4;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8128 8200 . + 1 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8374 8398 . + . ID=g8669.t1.exon5;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8374 8398 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8490 8575 . + . ID=g8669.t1.exon6;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8490 8575 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8661 8749 . + . ID=g8669.t1.exon7;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8661 8749 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8841 8875 . + . ID=g8669.t1.exon8;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8841 8875 . + 1 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 8970 9168 . + . ID=g8669.t1.exon9;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 8970 9168 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 9270 9420 . + . ID=g8669.t1.exon10;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 9270 9420 . + 1 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 9511 9577 . + . ID=g8669.t1.exon11;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 9511 9577 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 9662 9775 . + . ID=g8669.t1.exon12;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 9662 9775 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 9858 9943 . + . ID=g8669.t1.exon13;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 9858 9943 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 10043 10129 . + . ID=g8669.t1.exon14;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 10043 10129 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 10229 10558 . + . ID=g8669.t1.exon15;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 10229 10558 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 10645 11022 . + . ID=g8669.t1.exon16;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 10645 11022 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 11104 11202 . + . ID=g8669.t1.exon17;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 11104 11202 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 11298 11381 . + . ID=g8669.t1.exon18;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 11298 11381 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 11536 11572 . + . ID=g8669.t1.exon19;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 11536 11572 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 11698 12000 . + . ID=g8669.t1.exon20;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 11698 12000 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 12095 12158 . + . ID=g8669.t1.exon21;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 12095 12158 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 12294 12328 . + . ID=g8669.t1.exon22;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 12294 12328 . + 1 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 12422 12539 . + . ID=g8669.t1.exon23;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 12422 12539 . + 2 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 12641 12719 . + . ID=g8669.t1.exon24;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 12641 12719 . + 1 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 12870 13052 . + . ID=g8669.t1.exon25;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 12870 13052 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS exon 13310 13372 . + . ID=g8669.t1.exon26;Parent=g8669.t1 NODE_751_length_18146_cov_44.0944 AUGUSTUS CDS 13310 13372 . + 0 ID=cds.g8669.t1;Parent=g8669.t1 #PROT g8669.t1 g8669 MPNEELLDRQLEHLFDAHDGKPVGLFPKIEEYLRQAKESESQKIPACNKKLCELLFNAISSECQSNRPQNVRIGFELVRYIAEFGNESIGLPVLIDNKLVKMIPIATANISTIACAPSFTLSQLLVKTDEHNVAMLTILEAARDTAECIVKARELVGEHFGEYLLRGELKAQEDVNLRLAGMRVLSSALDGKQEDRKRIVAKIPDGKGLIKELASHLFKCGDFELQSSITEVLWRMTTPSDRKDVAEIMFTDGILAHHFASITGQSFEQDSRTFLNSVNSRAKDNLRTVTSFACDKVLVGKVSLFKPSSISELWSDFNTSSRCISLVIGEPKNPKNEDGDILTTVNFRIEDLQHWTIDKRDDKKGVVVKLTFKKSLAPIFEGYTIPDGQKCLELYLKEENAERFVTGFIENNRRLKTSVAEGMIRCADKPKTPVVKTHTPTPAKATQHAETPNPKKAPLVLAYAPPKQVETPAPVEVPAPIVMPKTVPEKKTRATKAVTKAQILAEDSQPEVFEQPIALAPIPAPNPIRARGKPAPKTISKKAPQQEVEDESDLEEEPIPAPAPKKQVKTVPVAEKPVAQKTNVVAPTQSTQRITSKDAPNPPAPISKPALKRLAPPPPLEKATRPSKAIPANEMDKENDPVTRGDNMPWMSNRQPAPNAARNAATQRKPLSSIATNESAPNNVYGAEAGTKQGKQKPQTNDDLAFDYGASPTIPMQTDDVVDMEDVQMSEEQEPTPPPTPPPARRGRPPAKEGPNRVNTKAPQKESLSRNNATVAATKGKRLREEPVLDDGGKGGDMDLDTLSLPDEFDAPPATKQTSTRRRDSDQGYSDDSAGDKGNRRGTDDSGYGSTVKKSRRSYDDEEQAAEQPPAKRRKAAPAKAAAPSPQGSDMQDIFGMLKASYNMNQKNKQTRIETITQDAIKTGTSKMEKLYRVQAEERARLLADIDAKCTHNCKAMQTHIGQQERVIRQLHENGAKLVRQLANFGQQAVADMASLEADQVKQKESLKKEFVTEMTALQKKMTEASKAQDVANLRRSLESMLPSLD* # ORIGINAL: g4030.t1 original gene structure, not modified by PASA NODE_2197_length_7315_cov_59.4023 AUGUSTUS gene 1 437 . - . ID=g4030;Name=g4030.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS mRNA 1 437 . - . ID=g4030.t1;Parent=g4030;Name=g4030.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 1 437 . - . ID=g4030.t1.exon1;Parent=g4030.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 1 437 . - 0 ID=cds.g4030.t1;Parent=g4030.t1 #PROT g4030.t1 g4030 MAAASNLTMDFPVVSLASFDDNSIALFKEYGVLVITDVVSKAACDATMNDIVSSFEQLGTGVRRNNLSTWNTFNLPPQTNVGLFQCLLCNTPAVWRIRTNPAIVQIFRRIYASMRGVPSISRLIVSNDGINVQPNGIKTREKPDW # ORIGINAL: g4031.t1 original gene structure, not modified by PASA NODE_2197_length_7315_cov_59.4023 AUGUSTUS gene 2683 6277 . + . ID=g4031;Name=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS mRNA 2683 6277 . + . ID=g4031.t1;Parent=g4031;Name=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 2683 2739 . + . ID=g4031.t1.exon1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 2683 2739 . + 0 ID=cds.g4031.t1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 3044 3293 . + . ID=g4031.t1.exon2;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 3044 3293 . + 0 ID=cds.g4031.t1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 3549 3683 . + . ID=g4031.t1.exon3;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 3549 3683 . + 2 ID=cds.g4031.t1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 3981 4219 . + . ID=g4031.t1.exon4;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 3981 4219 . + 2 ID=cds.g4031.t1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 4545 5423 . + . ID=g4031.t1.exon5;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 4545 5423 . + 0 ID=cds.g4031.t1;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS exon 5792 6277 . + . ID=g4031.t1.exon6;Parent=g4031.t1 NODE_2197_length_7315_cov_59.4023 AUGUSTUS CDS 5792 6277 . + 0 ID=cds.g4031.t1;Parent=g4031.t1 #PROT g4031.t1 g4031 MLKLLLLAKELHDVLGLNTAVTLRLLCGPPVGINARNIAWHGFLSPSELPREYVLGMLAIMCHIGAILRGTCTEPTALHISNRPLRHYGTHTTFGKEADRILTLIRTESQALESLIHESAFVVPGQEQLWMEALTHLLNVTHRSPDSPTPGYMSLCLLLPPLEHSLRRVYAVANGMEDRVATAQSHTQYITLDHVTSACVDDNECGADPSELGRPNRMWRDVGYHTTEWAMDLFAYPEGLRVRDRLSHGEINAASVCHEVALDVLLFGLSMCERLHYGADARVWSSPLVAFVRSRGQSYRSRFHPAYMLVREIGLAMHSVQNVRSVDVVSVATACRTGGDDALPNASARASTGQSMASEYHGTMREDCSVNEDSTVITPHALCRPDVCLPLETHEGVAGVARGVNATDDLTNEPRNARVEGWIRLQTEWMDRRDAVVRWIKQGGLHGEDVETACPCLDFMDTTFTGGAIIERLDLHGDNSGAGWLSPEFFHTPLFCDKTMLERLTLLRQMVAQIAAAADKLPAAYSDRQTALDARRLSSRARANFETLRNLYPQLSLGLSALLAVAKHVTVSHLSAMPGGLAARDGDGSGGTCASAEEATGSLSASGTQDGQESIVGRVCERNALVSALGVSRCKGEMTQLKSLRRSLKFAQNVCACVLENKWEEALRACVSFAEACAATC* # PASA_UPDATE: g5845.t1, single gene model update, valid-1, status:[pasa:asmbl_2568,status:12], valid-1 NODE_1769_length_9315_cov_43.325 . gene 6286 9038 . + . ID=g5845;Name=g5845.t1 NODE_1769_length_9315_cov_43.325 . mRNA 6286 9038 . + . ID=g5845.t1;Parent=g5845;Name=g5845.t1 NODE_1769_length_9315_cov_43.325 . five_prime_UTR 6286 6344 . + . ID=g5845.t1.utr5p1;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . five_prime_UTR 7028 7098 . + . ID=g5845.t1.utr5p2;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . exon 6286 6344 . + . ID=g5845.t1.exon1;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . exon 7028 7163 . + . ID=g5845.t1.exon2;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . CDS 7099 7163 . + 0 ID=cds.g5845.t1;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . exon 7365 7524 . + . ID=g5845.t1.exon3;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . CDS 7365 7524 . + 1 ID=cds.g5845.t1;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . exon 7814 8292 . + . ID=g5845.t1.exon4;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . CDS 7814 8292 . + 0 ID=cds.g5845.t1;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . exon 8499 9038 . + . ID=g5845.t1.exon5;Parent=g5845.t1 NODE_1769_length_9315_cov_43.325 . CDS 8499 9038 . + 1 ID=cds.g5845.t1;Parent=g5845.t1;3_prime_partial=true #PROT g5845.t1 g5845 MAKKTDARVERGYFEAEHLFNSVFQCHERQKQGGLKFTDNEYLQLQRNGAWDIISTLGNSILEGKDIASLSFPVEFFEPRSALERFMVGMCFGPTYLTPAAHETDPLRRFQLTMCFVVAGLHLLPTQRAPFNPILGETSQGTLSDGTTVCLEQISHHPPVSAVYMAAADGSYEMHGQFTWTANIRGNAMKSHMKGVMRIDFADGGRISFELPTVAIGGLLWGERTYDLCGSIAFRDEQNGIMCDLVFNPDSRRSWLKRLFRVRRASSRDAVAGTIYFRVDPLNDPDAIAACDVGGSWLTHLEFEGAGELWRLARERPSSISPTADALPSDSRYREDIQALTEGEVERAEELKRLLEERQRYTARLRKAGERDRQLRTKKGSGGPSSRAAKAVSFISSALVPGSNAQPMMTKGQR # ORIGINAL: g5844.t1 original gene structure, not modified by PASA NODE_1769_length_9315_cov_43.325 AUGUSTUS gene 4279 5237 . - . ID=g5844;Name=g5844.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS mRNA 4279 5237 . - . ID=g5844.t1;Parent=g5844;Name=g5844.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 4746 5237 . - . ID=g5844.t1.exon1;Parent=g5844.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 4746 5237 . - 0 ID=cds.g5844.t1;Parent=g5844.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 4279 4530 . - . ID=g5844.t1.exon2;Parent=g5844.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 4279 4530 . - 0 ID=cds.g5844.t1;Parent=g5844.t1 #PROT g5844.t1 g5844 MSRHLSGYVPLSHRFRLLKPGATVVDLGACPGGWTQVAVERVRSRETPHLLSESTRLSPAGPRDSAGSYDASAAQNDTSPPGTPIVSPPSSARAHAKSRKGMVVSVDLQEMEAVDGAIVISGRDFTLSSTQKLVLEALGGVRPMLVMSDMAPNAAGLGDVNHLATHHLVSSALRFALRTLANGGSFVCKHFHGEKIPEFRNLLRKHFETVKDAKPEASHKDSSEFYLVARGFKAPPPDEQMQQQQKQ* # ORIGINAL: g5842.t1 original gene structure, not modified by PASA NODE_1769_length_9315_cov_43.325 AUGUSTUS gene 91 1052 . - . ID=g5842;Name=g5842.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS mRNA 91 1052 . - . ID=g5842.t1;Parent=g5842;Name=g5842.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 91 1052 . - . ID=g5842.t1.exon1;Parent=g5842.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 91 1052 . - 0 ID=cds.g5842.t1;Parent=g5842.t1 #PROT g5842.t1 g5842 MDAQMDDTSDNAAAALFQELFNIPHVSPHQRESMSYVLWRRSQCHLVKKFAFSSTASSSEYGLSRPGCIARSLAPSHDVKTLHNAARIVAELCFEPSPPSSAVEYRREGCRDVPSASDCAASLLSEDDALRLRTRGVSSTAPESVPLHHNASALFGDAPSLDDGESVWMALSALLGHATDTIARAPIGRTVSYTSRLWQQLSTLCAEASLAIVVALSADIVASNLAALDAMRGVVRHSLETFLGRPELVDPAVILRLVQLDGRLSSVLHDKSVGRDATAWAAGVVLQRVVDRAPSGVLLAAHVPESVLGTAAVLLRLLRQ # ORIGINAL: g5843.t1 original gene structure, not modified by PASA NODE_1769_length_9315_cov_43.325 AUGUSTUS gene 1602 4029 . + . ID=g5843;Name=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS mRNA 1602 4029 . + . ID=g5843.t1;Parent=g5843;Name=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 1602 2073 . + . ID=g5843.t1.exon1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 1602 2073 . + 0 ID=cds.g5843.t1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 2217 2306 . + . ID=g5843.t1.exon2;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 2217 2306 . + 2 ID=cds.g5843.t1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 2454 2575 . + . ID=g5843.t1.exon3;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 2454 2575 . + 2 ID=cds.g5843.t1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 2848 2918 . + . ID=g5843.t1.exon4;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 2848 2918 . + 0 ID=cds.g5843.t1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 3112 3596 . + . ID=g5843.t1.exon5;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 3112 3596 . + 1 ID=cds.g5843.t1;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS exon 3710 4029 . + . ID=g5843.t1.exon6;Parent=g5843.t1 NODE_1769_length_9315_cov_43.325 AUGUSTUS CDS 3710 4029 . + 2 ID=cds.g5843.t1;Parent=g5843.t1 #PROT g5843.t1 g5843 MSDGMETKRRRLDIADAVTPDCRVVRMNSAYDNAKTKRMLSLALHEGTPFDDDGVTGAFATADPFPCCRLPNFVDDSEGFLRDVLAELKTTHMYRKSNDLYDFHQTDDMKRCDGNVAPLVCRLRDMLYTELLRWMRDVTGIDLNNTVNMTCARYGLTDNLLCHDDELEGRRIAYILYLVPPDWTAAKGGCLDLFSVDSSGQPDKIVQSLVPQWNQLAFFEVSPVSFHQVAECMCDDGRISISGWFYGPPIIRPPPHIEPPPHMRPPLALATSNSPSLAAWVSPQYLDTATKSKIRGLFVDESSAMLGEFLRPEKYAAVRADIMSLSRSSSPWVMRGPANRRHYEHLATLARIMDAPDSVAAVAAATEVERELHVPNLCGLALLLRSTAFQIFLSEITGLDLDTSTAEMRRFGKSCYTLLYDDESAHSMANSTSLDAVLYLIAPVESTIEAGSDWSTRYGGHTIYVSKGEDDELLSVTPRPNALSLVFKDEGTLSFVKYVNCIAPADVHDLCMHFAEASH* # ORIGINAL: g12472.t1 original gene structure, not modified by PASA NODE_4332_length_1805_cov_34.2532 AUGUSTUS gene 267 953 . - . ID=g12472;Name=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS mRNA 267 953 . - . ID=g12472.t1;Parent=g12472;Name=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS exon 932 953 . - . ID=g12472.t1.exon1;Parent=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS CDS 932 953 . - 0 ID=cds.g12472.t1;Parent=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS exon 628 704 . - . ID=g12472.t1.exon2;Parent=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS CDS 628 704 . - 2 ID=cds.g12472.t1;Parent=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS exon 267 395 . - . ID=g12472.t1.exon3;Parent=g12472.t1 NODE_4332_length_1805_cov_34.2532 AUGUSTUS CDS 267 395 . - 0 ID=cds.g12472.t1;Parent=g12472.t1 #PROT g12472.t1 g12472 MPEFTCTGHKSWVLFIAWSPDGKKLASGDKDNKSPSSTFNAQIFVWDTKTGKQLCGPLSGHKSWINYIAWEPFHL* # ORIGINAL: g2932.t1 original gene structure, not modified by PASA NODE_4632_length_1387_cov_26.186_potentialcontaminant AUGUSTUS gene 219 1103 . - . ID=g2932;Name=g2932.t1 NODE_4632_length_1387_cov_26.186_potentialcontaminant AUGUSTUS mRNA 219 1103 . - . ID=g2932.t1;Parent=g2932;Name=g2932.t1 NODE_4632_length_1387_cov_26.186_potentialcontaminant AUGUSTUS exon 219 1103 . - . ID=g2932.t1.exon1;Parent=g2932.t1 NODE_4632_length_1387_cov_26.186_potentialcontaminant AUGUSTUS CDS 219 1103 . - 0 ID=cds.g2932.t1;Parent=g2932.t1 #PROT g2932.t1 g2932 MAALLSDAILSKHPGMPMKALWEALNKKALVGPEVAVAIVNDPRCGIERRSEVREGEMNNQAIDLTLNAHTGGSTPLILAALAGRDDVMEALLSLNAAVDAKEDAFGYTALHISARTINISAIEFLIANGSDVRAVDKYGHTPLHKAAHSGNLEAMQLLIAKGSDVKAVDKYGYTPLLLAVQLGKPEAIELLVAKGSDIKAVGEDGYTPLHFAAQCRNTEAIELLIAIGSDVNAVTRDRLTPLYVAVHLGKPKATKLLIASGSDVNYTYDGSTPLHEAAVTGEVMKLLLAEGCY* # ORIGINAL: g2735.t1 original gene structure, not modified by PASA NODE_5972_length_668_cov_98.3069_potentialcontaminant AUGUSTUS gene 75 356 . + . ID=g2735;Name=g2735.t1 NODE_5972_length_668_cov_98.3069_potentialcontaminant AUGUSTUS mRNA 75 356 . + . ID=g2735.t1;Parent=g2735;Name=g2735.t1 NODE_5972_length_668_cov_98.3069_potentialcontaminant AUGUSTUS exon 75 356 . + . ID=g2735.t1.exon1;Parent=g2735.t1 NODE_5972_length_668_cov_98.3069_potentialcontaminant AUGUSTUS CDS 75 356 . + 0 ID=cds.g2735.t1;Parent=g2735.t1 #PROT g2735.t1 g2735 VKLIGSCKGCSSSSVTLKNGVENMLMHYVPEVLGVEQVEDELDPSARNSSKRSKIRAMAATRTIDRAVCFNAVEALRSWRSFRAGMVSDHSIH* # PASA_UPDATE: g1821.t1, single gene model update, valid-1, status:[pasa:asmbl_4116,status:12],[pasa:asmbl_4117,status:12], valid-1 NODE_2353_length_6602_cov_36.9666 . gene 394 5877 . + . ID=g1821;Name=g1821.t1 NODE_2353_length_6602_cov_36.9666 . mRNA 394 5877 . + . ID=g1821.t1;Parent=g1821;Name=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 394 523 . + . ID=g1821.t1.exon1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 394 523 . + 0 ID=cds.g1821.t1;Parent=g1821.t1;5_prime_partial=true NODE_2353_length_6602_cov_36.9666 . exon 722 1123 . + . ID=g1821.t1.exon2;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 722 1123 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 1431 1808 . + . ID=g1821.t1.exon3;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 1431 1808 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 1982 2377 . + . ID=g1821.t1.exon4;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 1982 2377 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 2639 2992 . + . ID=g1821.t1.exon5;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 2639 2992 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 3339 3761 . + . ID=g1821.t1.exon6;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 3339 3761 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 4012 4407 . + . ID=g1821.t1.exon7;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 4012 4407 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 4601 5386 . + . ID=g1821.t1.exon8;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 4601 5386 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . exon 5565 5877 . + . ID=g1821.t1.exon9;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . CDS 5565 5602 . + 2 ID=cds.g1821.t1;Parent=g1821.t1 NODE_2353_length_6602_cov_36.9666 . three_prime_UTR 5603 5877 . + . ID=g1821.t1.utr3p1;Parent=g1821.t1 #PROT g1821.t1 g1821 VRFTAADLTQGKYFIQSISVKDKAGNQLNKTFTATDTGFAVGVPDLKGAPQSFAIWRRDVDLGRSTAAGTSNAADYALSAVLQKNVAAGVRIVSFRLDNVDIFGTNTTGPECASAGACTITLSFNSVLALLGGSAGKRVAVTSLVVATSDVSAITVANWTQSVLDQNLFQSTLFVGKDSSPPSLTSFSVTSEEDSASLFVSVTVNDAESGIRPTSNATVSLTLWQIDGSKTTTVSLQVPCAVPKSLVALVGPVTCTLVYYPTYFDASTMGVWGVVNSVQISDYMGNALVATTSTYPNRFFGYPVPNAVWVATLQSFVISPCYGRKAQALTTFTAVVYWRGRVVCTSGAGSCATLTIMSSSGTFFVVNADSISIAQQPGTGLTTATIVFALKASDAVLAVGQWFADSVFVQETSGLTQTLKIDPSVGAFYSSSDSYPSPTQKPVVDTGSFSISYADDPSRSGSYVVSLGLSATASGMGLCACSVTFGFTSVTGVPVSKSFSGANMMSRQSFSFVPSDYPADFVTISSISVTDAYGRVADVASNKLPATRVLTRIDRTPPTLSTVAVMTTGSILARSVRVTVETSDVAGLCTRAGCLSMAFNRTQTVMDSANTTAASPGANRRRRSVVVTSKTVDSSPDNTVVNGGTVVMTVPQTVLGPGDWSLASVTLEDAVGNRNTVGGASLGLSGALAFQFIVDTENPTITSLTRTPAWGIAPDTTGEIQHILSITDPLSGPSSVSGAYTLVLGPVGGNPDDSTTTVSISSTATIDGNVGTVLFSAAASRFAPAQFTRGLWTILSLKYCDNSQNCPVQRGADLKQLVAETFVVDENCMCTGSGTVATGRKCEPTTGQCLCKPTLAGSGCQRCADLMYDMVDFACRACPCVANNTQACDQTDGRCACKPGYAGTTCSLTSTVASSGSDKSSGGIGVGVIAGAAVGGILAIVGITFGLVMYRRRKLASDDHVPKFLIVNSMHSGGDAGTSTIALEERLLSGSNRMKGGKNKGFALEEAAYERDGKGGVSQHNYVEYDDGKGGVPKHNYVEYEDVKELRGDNHYSDLGAYQDLESVRPLASNVSVYVNPQADEYLDPSGAGPKPQYAAPLRR* # PASA_UPDATE: g11312.t1, single gene model update, valid-1, status:[pasa:asmbl_7001,status:12], valid-1 NODE_4125_length_2147_cov_47.7703 . gene 110 1916 . - . ID=g11312;Name=g11312.t1 NODE_4125_length_2147_cov_47.7703 . mRNA 110 1916 . - . ID=g11312.t1;Parent=g11312;Name=g11312.t1 NODE_4125_length_2147_cov_47.7703 . five_prime_UTR 1787 1916 . - . ID=g11312.t1.utr5p1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . five_prime_UTR 1576 1632 . - . ID=g11312.t1.utr5p2;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 1787 1916 . - . ID=g11312.t1.exon1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 1463 1632 . - . ID=g11312.t1.exon2;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . CDS 1463 1575 . - 0 ID=cds.g11312.t1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 1161 1322 . - . ID=g11312.t1.exon3;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . CDS 1161 1322 . - 1 ID=cds.g11312.t1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 823 901 . - . ID=g11312.t1.exon4;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . CDS 823 901 . - 1 ID=cds.g11312.t1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 405 603 . - . ID=g11312.t1.exon5;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . CDS 405 603 . - 0 ID=cds.g11312.t1;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . exon 110 234 . - . ID=g11312.t1.exon6;Parent=g11312.t1 NODE_4125_length_2147_cov_47.7703 . CDS 110 234 . - 2 ID=cds.g11312.t1;Parent=g11312.t1;3_prime_partial=true #PROT g11312.t1 g11312 MRAKATHLTIQCRKCQNTKEIPVRSGFGGAELPRTCDREPVSNAEERCPIDPYMIIGDKCRCVDQQSLKLQESPEMVPTGELPRHMLVSADRYLCQRAVPGTRVTILGIYSIFQSKQTGGNAKSVAIRNPYIRAVGIVVDNEGAGRASTSFTPDEEEEFLQLARSPDAYERIVNSIAPSIYGSTDIKRAVTCLLFGGARKRLPDGMRVRGDINVLLLGDPGTAKSQ # ORIGINAL: g13169.t1 original gene structure, not modified by PASA NODE_1101_length_13980_cov_39.5894 AUGUSTUS gene 6376 9517 . + . ID=g13169;Name=g13169.t1 NODE_1101_length_13980_cov_39.5894 AUGUSTUS mRNA 6376 9517 . + . ID=g13169.t1;Parent=g13169;Name=g13169.t1 NODE_1101_length_13980_cov_39.5894 AUGUSTUS exon 6376 9137 . + . ID=g13169.t1.exon1;Parent=g13169.t1 NODE_1101_length_13980_cov_39.5894 AUGUSTUS CDS 6376 9137 . + 0 ID=cds.g13169.t1;Parent=g13169.t1 NODE_1101_length_13980_cov_39.5894 AUGUSTUS exon 9454 9517 . + . ID=g13169.t1.exon2;Parent=g13169.t1 NODE_1101_length_13980_cov_39.5894 AUGUSTUS CDS 9454 9517 . + 1 ID=cds.g13169.t1;Parent=g13169.t1 #PROT g13169.t1 g13169 MVAINRLLNAPARPHTAPAGGRPTSVAQIEEEVDVGSNMIIAVRVRPMNERETNSPFREVIRVLDRNVLTFDPRMENIPQLGDSTGRNAAQQPKRMPAMGRRERDIQYGFDCIFDATATQEDIFDGTTRFLVDGVLSGYNATVFAYGATGAGKTYTMLGTESSPGVMVLTIRELYTRMEQNPEKNFDIAVSYLEVYNETIRDLLVDASGPLNLREEIGKPAVVGGLSLHKPTNADELYAMLQTGNDRRTQHPTDANAQSSRSHAVFQIYVRQRDRTADISSDYRMAKLSLIDLAGSERATVTTNRGDRLREGANINKSLLALGNCINALVERKGKSSHIPYRDSKLTRLLKDSLGGNCRSVMIANVSPSAMSYEDTHNTLKYANRAKNIQTKVVRNVVNVNSHISKYREIIDSQRAEIAELKERLLKVAPQPQRPITGSASAASSNARGGQNTTKSAWEDDTASARAIEQIYAERLQLRREFAELDRLDKADQLEIARRRRQHALARSAIVDEECAGETIRRLERETAAFSTCLQERDAKRKSLAAQLAANEERMQAIQIPAQLPHAQLGSSGNFTPTYSSPAALRARAAAAECEKAELELRVRHVRSALDDFERSEQRSERVIAALASGMIAQNEALRRAAEETGVDADAIKEALGRFDEIVALVSAPDGPFSAWRLTKDAPISYRRLSIGGSNATVSEEAAVASSAVSVDSNAARDEPDEESHVDAPAPVIHNGHVSAVPTREGPKETVSKPLRSMMRRASNPNSVRESNLSSTITKEKPAASASTSRDCPTSPPNMRTSRVKFSAGEEGGWTSNQQRAAILEKPLTGDAHDVLAARRASCVETSARYMGLTAAAKSRAVSRKAAEDNVAASQTKTVVLTAPKRPATAVVMKENSHPSTGDNVSAGGVGDEAADPERTRALSAKSRPESIFQSQSKVWR* # PASA_UPDATE: g13168.t1, single gene model update, valid-1, status:[pasa:asmbl_388,status:12], valid-1 NODE_1101_length_13980_cov_39.5894 . gene 327 5633 . - . ID=g13168;Name=g13168.t1 NODE_1101_length_13980_cov_39.5894 . mRNA 327 5633 . - . ID=g13168.t1;Parent=g13168;Name=g13168.t1 NODE_1101_length_13980_cov_39.5894 . five_prime_UTR 5378 5633 . - . ID=g13168.t1.utr5p1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 5219 5633 . - . ID=g13168.t1.exon1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 5219 5377 . - 0 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 4584 4861 . - . ID=g13168.t1.exon2;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 4584 4861 . - 0 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 2405 4202 . - . ID=g13168.t1.exon3;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 2405 4202 . - 1 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 1960 2101 . - . ID=g13168.t1.exon4;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 1960 2101 . - 0 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 1635 1735 . - . ID=g13168.t1.exon5;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 1635 1735 . - 2 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 767 910 . - . ID=g13168.t1.exon6;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 767 910 . - 0 ID=cds.g13168.t1;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . exon 327 452 . - . ID=g13168.t1.exon7;Parent=g13168.t1 NODE_1101_length_13980_cov_39.5894 . CDS 327 452 . - 0 ID=cds.g13168.t1;Parent=g13168.t1 #PROT g13168.t1 g13168 MGNSFCLVTRSAALQKQKELQAEIDKSKRQTENVKGQLQRLKEDHAAAKERIQAQEENLNEKNKHNAETLATLQRSRDECKALEIEIARKQATLETLQRAMHERELQLVETRDCVKTLEIGLAKYEKEIEASARLAQEVQKEVEARQAHIQTLTSEVQSTRNTMKDGVMSGIGTLSTKTDTVAEMLHAITAKTESAHSQLLSAISGVSVRMEALVKAKVDYSSVIANSERASAQLLAQSGSSDPLLDQFLEMAASGALGDDVAAAIGNLFGTSATVHVTGSEISEDTDDDGTVEDESDESGVDDTEDARMKEGEEGGGGVDNDASAEEGAHVAGRAEGRIDDSMYLSPMSASDDEDHEEERGEERSNDDIHRGSDASDVEAAEKSDDDTVVSGDDDAGSSDGKESRDGAREGQERRRGSDHVTAKKKRGRSNTTSGHGPEELEISALTVEGGDDHADKEVEKDVEKDEKEKHEEKHEKEEEEKEGEENNAGHKSESRRPKRGRSYTVSSASGATAQDGDDATNDATVADGVGGVSASGIENGKDDLGTSAATGGRTKDKKKGRARAGTVNILDKEDAPAAISGEKTHQDDSTQRKHKRRKHGKKASGAGETDRSAGRNVDLTALAAFVEALKAAAARGNMSSLGLGGSAHASKALLHATDHVNSAANDGEVTSQSASELIALREVVENVRGELTSEQAAVTSLKAQVATAMEALEAAESAVARGTKAREEALAALSAERLAIGEKLRFLEEKCDSQQAEIDALRSREAQLTALIDAAEKRNALLETEIQVLQDDRPPDAPKIHVTVASADPKLKAVESKLRKLLLKRESVLIPLREFDLIAMDPRRFWERSDRLLNEAHVRHVCYTRLQQLEAKIWDALDRYAELGSNPKTRASVRIEWDIPREYGSVKVRVWST* # PASA_UPDATE: g13170.t1, single gene model update, valid-1, status:[pasa:asmbl_387,status:12],[pasa:asmbl_389,status:12], valid-1 NODE_1101_length_13980_cov_39.5894 . gene 10516 13903 . - . ID=g13170;Name=g13170.t1 NODE_1101_length_13980_cov_39.5894 . mRNA 10516 13903 . - . ID=g13170.t1;Parent=g13170;Name=g13170.t1 NODE_1101_length_13980_cov_39.5894 . five_prime_UTR 13750 13903 . - . ID=g13170.t1.utr5p1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . five_prime_UTR 13409 13471 . - . ID=g13170.t1.utr5p2;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 13750 13903 . - . ID=g13170.t1.exon1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 13327 13471 . - . ID=g13170.t1.exon2;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 13327 13408 . - 0 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 13035 13104 . - . ID=g13170.t1.exon3;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 13035 13104 . - 2 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 12490 12694 . - . ID=g13170.t1.exon4;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 12490 12694 . - 1 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 11869 12036 . - . ID=g13170.t1.exon5;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 11869 12036 . - 0 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 11308 11425 . - . ID=g13170.t1.exon6;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 11308 11425 . - 0 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . exon 10516 11068 . - . ID=g13170.t1.exon7;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . CDS 10815 11068 . - 2 ID=cds.g13170.t1;Parent=g13170.t1 NODE_1101_length_13980_cov_39.5894 . three_prime_UTR 10516 10814 . - . ID=g13170.t1.utr3p1;Parent=g13170.t1 #PROT g13170.t1 g13170 MYQWTEHVSTRRINEGQHTREEKTYTYKTEWSSTVIDSKYFDTSYGHENPRALPIPSKSFTARDARIGPFSSSDSLLQKIADWQPLLLNSGIKSLLPHSLQHFNVVDGYLVTGDPRFPVVGDVRVNFKYAGTTAPPSEAAVVSVIALTHSGRLMPYVTRGGRDIELLSPGEVTMVDMFDKEHTQNNITTWILRAVGWFVMFLGISMTTSIVYTIVDWIPIVRSLVGLGLSTFNFILSVCLSLFVIAAGWIRYRPIIGAALLAVALVPILLQHSRSAKSPPYPNKGAGFPMPETPAEKR* # PASA_UPDATE: g11518.t1, single gene model update, valid-1, status:[pasa:asmbl_9045,status:12], valid-1 NODE_720_length_18643_cov_43.9811 . gene 192 5498 . - . ID=g11518;Name=g11518.t1 NODE_720_length_18643_cov_43.9811 . mRNA 192 5498 . - . ID=g11518.t1;Parent=g11518;Name=g11518.t1 NODE_720_length_18643_cov_43.9811 . exon 1544 5498 . - . ID=g11518.t1.exon1;Parent=g11518.t1 NODE_720_length_18643_cov_43.9811 . CDS 1544 5498 . - 0 ID=cds.g11518.t1;Parent=g11518.t1 NODE_720_length_18643_cov_43.9811 . exon 723 1092 . - . ID=g11518.t1.exon2;Parent=g11518.t1 NODE_720_length_18643_cov_43.9811 . CDS 723 1092 . - 2 ID=cds.g11518.t1;Parent=g11518.t1 NODE_720_length_18643_cov_43.9811 . exon 192 384 . - . ID=g11518.t1.exon3;Parent=g11518.t1 NODE_720_length_18643_cov_43.9811 . CDS 192 384 . - 1 ID=cds.g11518.t1;Parent=g11518.t1 #PROT g11518.t1 g11518 MAHGVAKTVVSLLLCALLCAYCAHDARAESLLALVQRIARDAPALVSSLPSTTFSPSVPGELSFNVSSGHFLFSIDASAISGIAWSDQVDATLKGLPNDSSLTPGPIVVDAASGSFQGVAMNGNGVAVTCPRVSPLLTLLLSTGHLILANFTITNCISDDVGMDGRHTALIRMSNATSLSLLSITFSSMRGVRVIDASEGGNIFVRNVNISDAFVSPGTLPCDAESDGCGGGVLVRAGGTATVDVRSLAARDFGCTINNGSSGGLFVIKDDARLLVGELVIHNATAHRGGVVAMYGQASADFAGVRAQVLRAEADGGFAYAEGSASLSVTGSSVDAAVALKGGVFALTGGATLHLDDINATHVDAGEDGGFAWMGGNAAVTVSGLVLDTASAQLDGGVFTLTEYATAHMTSVSATRVSAGGRGGFASVRLSAAMSITGFVLHDAIASDGGGFFIAEAVFNGFPGGLALVQLYNAIVRLVQAGVTGGFVRNEAPNYGSTNFEATNLTLSDAHSTEGGGAFWSSGIVTIASSTLTDIVSGYGGGGLLLTSGNTMCVFSDVRLERIYSSGSGGVFSSSGLSTLTITGLVAHDITSDGSGGIARIAGVCSVLMRNYTLKHVRAIQGGVVSVTDDASFRMTDGIVEDVRADYGGVGYAEGERGSIDIASPFTLTDASALYGGVLYLVGGGLASLHFPFWSVSETDYLWISGISASRDGGFVHAQDDAVIYMMGCRLSDCTARNGAVMSLSGRARAVISDSSIDSVAARQNGGVALVRDDSLMEMYSTNTTNVSAVNGAFLSMNGGSQALIQQSFVSGVTVRQKGAFARLQDVAMLTVDDVRVSNASASAGSVLFVTDDASVVVTGSSFASLSAIDAGGFAFADGESYIELSRVYITNTTARNGGAIGIFNSAHVNMTATEVTNAQVSEEGGVLYVQDRGNVFADTLRIISVSAYSGGVVYAADISTVRLSSAIVRGSNAASSGGCVYAGGSAVVRLSGGSFVQCHAGTTESTGGTGGVAFVNTGARVSVSGPLLTVALASAVIGPGFYSEERFDDASLSSVALEGPLVDPASKVIVVDAGGMFSGPPATIAAIGASGVPLPVGAGVVMNTASGAIVPAFTLQLRDIYGNATSLSGRELTVKLSLRPSDGSALLTGDVEKGFGTSSSISFASLRLYGVPGTQYSFVLEASNKFYYGDGDTNEQRQTLLNNASIGIGIRDCGADEISVMGTLGYPECDAVGASAVGSSSSSNVLQIALSSSLVAGAVAIAVVYAVFRWSRHAAMLRQKESRATHEEFIEKHLSKQPELFSLETPRDAVELLDRLGEGEFGVVLRARVMREDGRPCLCAAKMLKTGCTLRERVAFVQEATVMQGIGQHPHVVSLCGIVSRDEPMLILTEYVPHGSLDAFVKSIPVAHRTTGSVSVNMFETFSSHIARGMAHLAQMRIVHRDLACRNCLVGQDLFGGYVCKVTDFGMSEETTGGKEYFRKKEKEKLPVRWMAPESITEKKYHQV* # ORIGINAL: g11519.t1 original gene structure, not modified by PASA NODE_720_length_18643_cov_43.9811 AUGUSTUS gene 6506 16211 . - . ID=g11519;Name=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS mRNA 6506 16211 . - . ID=g11519.t1;Parent=g11519;Name=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 14916 16211 . - . ID=g11519.t1.exon1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 14916 16211 . - 0 ID=cds.g11519.t1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 14472 14744 . - . ID=g11519.t1.exon2;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 14472 14744 . - 0 ID=cds.g11519.t1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 10100 14227 . - . ID=g11519.t1.exon3;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 10100 14227 . - 0 ID=cds.g11519.t1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 7850 9905 . - . ID=g11519.t1.exon4;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 7850 9905 . - 0 ID=cds.g11519.t1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 7396 7683 . - . ID=g11519.t1.exon5;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 7396 7683 . - 2 ID=cds.g11519.t1;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS exon 6506 7191 . - . ID=g11519.t1.exon6;Parent=g11519.t1 NODE_720_length_18643_cov_43.9811 AUGUSTUS CDS 6506 7191 . - 2 ID=cds.g11519.t1;Parent=g11519.t1 #PROT g11519.t1 g11519 MRTIVGGIRPSATTAGAIKLAPWPLLLGSAATARLALTLALFACAASLMPISHAYRIVEARYPPEGQNGGAHGASIVFYIDADHCSDADNNGNVYGDCFFTFPPIGSGIACTFEWNCAAPAPNVRQWKVSGKEYMPSQTMTFPNIAQYLLNGCRISFQYTVDENGNDKSSVSISGELDGQLYVTAEYPAIPTHPEDKTVYSAVLRSGLSLKGALDKFSIFGNALTRNAVVDSILGAALNVELKSISLQFSPRTGTIVGTATLSLYGADASIWVYIGSYDTQIGKVSGVSVIFKATLNAVVGDSLPAILKPVFSLNLKDAWLAYTTTYVKFNLAGDDMDFDTGVSFVGRISPSDGQLAAFKAKLGESEFAKKLDKATLSAKAVISSLTTIKFAIELEGEFPIANAVQVKKLGFEVEATAAPPSIKFAFNIVVDVTFNKAASDENLWKVVTFDGRLALGVNPAGVVLEAELSASSPTPWVNPLGISQRVAVLFPLVFKLGVLITPSPPWVAPETFAIAGGLRIGTNPETATLAQIALSADLTNPSKNAARFEAKNLRFTSIMSNVVGCDGCLGFFGDVMDNYMSVGSILIEFNPTPASINIGTSTAPIVVQPGLLLDVTDLRIYFVFQIRRGFIKAGGRGIEALVDMAPVDFAGILVVRKYDPARARRSLSFESLASSPVTIARRKSLPGAHARERSIYELLPFDVEPSQVGSQEHWHLPRSFRQPTRRLGRAVAPPSYAEIVLRSSPSVFLRFESSANATGLLNSGIGLPNGVNQNGPVRAVEGYVGNAAEFTSGTTVSFELNSLFRNSTTVSELSVEAWVRFSPSLVTLQESLDLFHSGADGKGLLRADSVVIRVTPRASIAVELSTTGDFAETDAMAIRPGQWQHVVVVMTMSSIKIFVNGYVRASASRFAVIPMLGGVSHLGPFAVGAGQDTDATPVAIDEYAVFARSLSREEIWAHYQAYEGTDLYSWSVAQHEPVVFEMFEGSDVALSGGASDFGAGQRETNTTFSKGLIGEALVMSREALTGYTVSEGMGGSEKATVEFWLLIDADGNEPPTAERFVLQGVESAYFQGAKVSVALSKAGTLMVAVGDMPLNDFGGRTVRPGVWTHVAVTIDGKLVSGYVNGVSVGQFQWAQKAFQLGPFAIGCFSEGPCIWTSTLSGLIDELALYRTALTPSQLWAHYAILSASGEEELSSAVILTGARVYLRFDETDLSVSDGSVDYKVAVSKSAVSVDGGAIDTRGVSVDAAQKDRTLFVAQSASDRDFSEGFTVEFWARDFSIPVIQSLAESDTWVFAEGSNFKLQFESQGVVRFVHSAGSTTVGLSDIHARPSRGMHNFTHIAIALRPSLYDIFDPRFFPGALTVCVDGSIVGSSYMFTKSGNTDAKSFSFFAPPQNAPFATVLDEIATYDAYLAPSDLYNHYAHARYGSKSRGAAISSEHPTIFVRFENKDYIKNYGSALTLDRIVGGSGMRVSAPTAPMPDDGTGMDADRVGLFAGKPIFMPSLALAKTEGVTFDIAFRLNELPCSPGVMTIFSSNFQKTDKDPEWSNTGAVALQVMHDARTRRSWLRATAVGAGQVDMMTVSKGVLYELTVVFETTGASLYGFVPVVGVTLIDRGTWQPATSDFRFNVDFVFIGGSWNGQIRNDIGMFGEVSFYALYHHAITEDALLARSWEGARIDTGEAESTDGNRRRRTADRDGAIVAMFERSYTPDEAHLDGSLDGRGRRGDDSDGPQFAMKFTPNEQYLRANGAVSLLRTVNAKVALDIRQYDIYAEAAFRFGDAFALNFKLQSTGLPGSNGFQFSFAGSIENRIWEELGRTGVAVAQQFATAATGQLESAKASLGSAKARLEEAKNAVERERQRVQEKFNDAQNAVRSKQNDLNNLQNSCNDYCGNCKWYKPWNCVSCAGCEIALAVARLALNAAQAVIGAVSFAVDSGFKLAEAAVSAAQVAINLAQGALDGAIGVVNALPGLIEGLTSFLSKVFSVRSANLATTITNDRGTIGFDIQVTLLGQDIRLTGQLTLSWEGVKSWIVEQVRAAMRRIGFSRRRRGDNDDQRAFEGVGPELLHAHAGVVDMTLHPHFGAAHVTRRGAVVKEIDTAVACAAGTAVYDGSAQGFDGTLPECLFDVPTVQSLFLTGNSIGGSIPAFGNATALEYLALGVNRIGGPIPASIKNAPNLRWLDLSDNDISGSADPLAALLSLENLDLSGTKIDFSAGKGLSITLAQLPRLRAYDVTGVASPSDALSASPIEVTTVVVTLLSGLPQRMYCGECELAIRLEGKCPSAGCAQDNLATHRASEYVTMQLAAAGVEGLGKATVKITGTFAFGDARTMISAEISNIPAGSVQSYIRTLAIAPRQEAFTSGTRVEYQESRAKCPPGRFGEDCKFFCPFAWELYSPTATSVEQSMIDSAGLEVATGIVLDGLQPRCFVPNNVTCGQNVTVAVQEAVDSCILYIGGTSPVSRCTAAILTARSLADALSKPAACVDGPLQPFITVANAEISGEVCDISEFEGSLVTTSGDDAGAFSLAFNRADGSVSFSVKSGGADFTSMVYGSDPHNDDCGVWRFAGTEDMGDDVTSVDVVEGHVGFPGNTLLSWNGQNAGAKAVIMATGGVCMSAQWHAGDLKDGWLRADLSTANSKTKAFHFHAVVRTRGRPNGAFASNIKFKRCAAQLPSCPEFCTSGRTCAVRDGDCPAGTRCEDVLNTKNPSQTTALCHCLSGAFDMNGHCMLAGVLAPFTDGTVVACGPKITSSCFKSSDGGSSWNEHSDRNADPLRTTLVGTGLDDDGKEYLLYATAGPIWRESTGTPDNERCLVQFNDGGLIRLVPQNYAELKSMAIRDHVFHRAVMSVGVTTTQTGSSPSDGILLRREGNNIGKVGVTRRGVYYKRVDPVTGDDESEWRMRAVWQCRCD* # ORIGINAL: g11734.t1 original gene structure, not modified by PASA NODE_484_length_22757_cov_40.0033 AUGUSTUS gene 15830 17791 . - . ID=g11734;Name=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS mRNA 15830 17791 . - . ID=g11734.t1;Parent=g11734;Name=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 17379 17791 . - . ID=g11734.t1.exon1;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 17379 17791 . - 0 ID=cds.g11734.t1;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 17043 17196 . - . ID=g11734.t1.exon2;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 17043 17196 . - 1 ID=cds.g11734.t1;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 16663 16821 . - . ID=g11734.t1.exon3;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 16663 16821 . - 0 ID=cds.g11734.t1;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 16258 16318 . - . ID=g11734.t1.exon4;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 16258 16318 . - 0 ID=cds.g11734.t1;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 15830 15888 . - . ID=g11734.t1.exon5;Parent=g11734.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 15830 15888 . - 2 ID=cds.g11734.t1;Parent=g11734.t1 #PROT g11734.t1 g11734 MAPGLALARLHTGRLLPSVHRVTRNGSAAGLSAAIAPPHTAALAEAVVPTAAGCMRRWYSSSPTSQGDGSNTAGGIGLGVVRDDSVVVGQSAHSSRGSRVVVFHFDTYRLVRQLEAKGFSTQQSEALMEALVNITGDSVSGAVQNTVTKSELDQFNLRMQSELTSMRKEMHIVEKSEFATLRNEAMKGQHELDKVREQLKDEVSKLRAGVKLDMSLEKSRLKEESTVIEHKIKDTNNRIDTEIAGLRMQMESLKLDIIKVLAGGAVSALTMFLAYLRFIKN* # PASA_UPDATE: g11732.t1, single gene model update, valid-1, status:[pasa:asmbl_7667,status:12],[pasa:asmbl_7669,status:12], valid-1 NODE_484_length_22757_cov_40.0033 . gene 9879 13116 . - . ID=g11732;Name=g11732.t1 NODE_484_length_22757_cov_40.0033 . mRNA 9879 13116 . - . ID=g11732.t1;Parent=g11732;Name=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 13061 13116 . - . ID=g11732.t1.exon1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 13061 13116 . - 0 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 12768 12862 . - . ID=g11732.t1.exon2;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 12768 12862 . - 1 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 12567 12666 . - . ID=g11732.t1.exon3;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 12567 12666 . - 2 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 12317 12478 . - . ID=g11732.t1.exon4;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 12317 12478 . - 1 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 11938 11992 . - . ID=g11732.t1.exon5;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 11938 11992 . - 1 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 11570 11683 . - . ID=g11732.t1.exon6;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 11570 11683 . - 0 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 11210 11348 . - . ID=g11732.t1.exon7;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 11210 11348 . - 0 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 10904 11029 . - . ID=g11732.t1.exon8;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 10904 11029 . - 2 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 10567 10765 . - . ID=g11732.t1.exon9;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 10567 10765 . - 2 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . exon 9879 10389 . - . ID=g11732.t1.exon10;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . CDS 10194 10389 . - 1 ID=cds.g11732.t1;Parent=g11732.t1 NODE_484_length_22757_cov_40.0033 . three_prime_UTR 9879 10193 . - . ID=g11732.t1.utr3p1;Parent=g11732.t1 #PROT g11732.t1 g11732 MSAAEARPLLDQSPAPGASQSQTVRRQRAVDADETDFIVAVFVVAFDTKKGNVVSFKYPADVDLSGVEFKAMPSGAHLVTEDFIYFSVNAGAFGVACYAKKLVDNAAERGARMRSVGILCAKLTSLHKHKEFLEEQVLCHLEQENDFSALIAHYEKYKSHPENAPEPHEFGSKAEVGEASLESMHGVNIKPLMKISHPAGSLSQFAQFFGVDVFVLWKLALLRKRILFYSPPPIGVVCYRVYCACLLALQSIPSLHEGRNVPLFFVNVADIPMLEMQESYIACTSEKIFATKKQLYDAYIDGRVVTGSATIASILTPTPADKARAAVVDLLLTPGPDQSPIDADDRLSKYFMELNNNVFQTLLDVAACPSENAVTRQTLRTMGLDAADENFVRLLCELHGIHVTFNISCCDYL* # PASA_UPDATE: g11733.t1, single gene model update, valid-1, status:[pasa:asmbl_7671,status:12], valid-1 NODE_484_length_22757_cov_40.0033 . gene 13539 15212 . + . ID=g11733;Name=g11733.t1 NODE_484_length_22757_cov_40.0033 . mRNA 13539 15212 . + . ID=g11733.t1;Parent=g11733;Name=g11733.t1 NODE_484_length_22757_cov_40.0033 . five_prime_UTR 13539 13649 . + . ID=g11733.t1.utr5p1;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . exon 13539 13742 . + . ID=g11733.t1.exon1;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . CDS 13650 13742 . + 0 ID=cds.g11733.t1;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . exon 13966 14132 . + . ID=g11733.t1.exon2;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . CDS 13966 14132 . + 0 ID=cds.g11733.t1;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . exon 14670 14715 . + . ID=g11733.t1.exon3;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . CDS 14670 14715 . + 1 ID=cds.g11733.t1;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . exon 15039 15212 . + . ID=g11733.t1.exon4;Parent=g11733.t1 NODE_484_length_22757_cov_40.0033 . CDS 15039 15212 . + 0 ID=cds.g11733.t1;Parent=g11733.t1 #PROT g11733.t1 g11733 MADPSFVIRRGVSSDAPNLVPAVMALAKETEDIDLDLPTVTLGVNAVFNSPDGARGFYLVAETDDAERNFMGCLMVTSEWSDWRNGKWIQSVYVNQQYRKRGVFKALFEAVNTAARDAGDVRYVRLYVERTNERAKRAYESLGMSHSHYDMYEMSYLDK* # ORIGINAL: g11730.t1 original gene structure, not modified by PASA NODE_484_length_22757_cov_40.0033 AUGUSTUS gene 188 2748 . - . ID=g11730;Name=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS mRNA 188 2748 . - . ID=g11730.t1;Parent=g11730;Name=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 2667 2748 . - . ID=g11730.t1.exon1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 2667 2748 . - 0 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 2472 2536 . - . ID=g11730.t1.exon2;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 2472 2536 . - 2 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 2162 2361 . - . ID=g11730.t1.exon3;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 2162 2361 . - 0 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 1736 1812 . - . ID=g11730.t1.exon4;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 1736 1812 . - 1 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 1310 1399 . - . ID=g11730.t1.exon5;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 1310 1399 . - 2 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 727 800 . - . ID=g11730.t1.exon6;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 727 800 . - 2 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 378 491 . - . ID=g11730.t1.exon7;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 378 491 . - 0 ID=cds.g11730.t1;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 188 230 . - . ID=g11730.t1.exon8;Parent=g11730.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 188 230 . - 0 ID=cds.g11730.t1;Parent=g11730.t1 #PROT g11730.t1 g11730 MASPDARPVEKFQEYLRIKTVAPNPDYEGAMVFLEAYAKELELPFHRLEPVPGFPIALMRWDGLDPSLPSVLLNSHTDVVPVVEALWTSDPWAGNQRDNGDIVGRGAQDMKCVGIQYLEAVRRLKAKGYRPKRNIHLSFVPDEELGGGRGMMPLINDPHFQSLNVGFAMDEGVRVISTGQPGHGSRFIENSAMEKLMIVIERFLAFRREQKQLLDSGVATELGDVTTINLTMLKGGLQFNIVPPEAEA # PASA_UPDATE: g11735.t1, single gene model update, valid-1, status:[pasa:asmbl_7672,status:3], valid-1 NODE_484_length_22757_cov_40.0033 . gene 18270 21055 . + . ID=g11735;Name=g11735.t1 NODE_484_length_22757_cov_40.0033 . mRNA 18270 21055 . + . ID=g11735.t1;Parent=g11735;Name=g11735.t1 NODE_484_length_22757_cov_40.0033 . five_prime_UTR 18270 18353 . + . ID=g11735.t1.utr5p1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 18270 18454 . + . ID=g11735.t1.exon1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 18354 18454 . + 0 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 18596 18623 . + . ID=g11735.t1.exon2;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 18596 18623 . + 1 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 18837 18923 . + . ID=g11735.t1.exon3;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 18837 18923 . + 0 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 19170 19310 . + . ID=g11735.t1.exon4;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 19170 19310 . + 0 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 19678 19741 . + . ID=g11735.t1.exon5;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 19678 19741 . + 0 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 20331 20390 . + . ID=g11735.t1.exon6;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 20331 20390 . + 2 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . exon 20734 21055 . + . ID=g11735.t1.exon7;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . CDS 20734 20783 . + 2 ID=cds.g11735.t1;Parent=g11735.t1 NODE_484_length_22757_cov_40.0033 . three_prime_UTR 20784 21055 . + . ID=g11735.t1.utr3p1;Parent=g11735.t1 #PROT g11735.t1 g11735 MASQNVNPSSAPVAANPKLSGANGAAEGHAVTRRLQQELMSLMMGGDNTISAFPEGDNLFSWVGTITGGAGTVYEGLTYKMSLKFPASYPYAAPTVRFETPCFHPNVDQHGNICLDILKEKWSALLDVRTVLLSIQSLLGEPNNDSPLNSAAATLWANQEEYKKQLLKKYSEDARK* # ORIGINAL: g11736.t1 original gene structure, not modified by PASA NODE_484_length_22757_cov_40.0033 AUGUSTUS gene 21708 22485 . - . ID=g11736;Name=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS mRNA 21708 22485 . - . ID=g11736.t1;Parent=g11736;Name=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 22310 22485 . - . ID=g11736.t1.exon1;Parent=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 22310 22485 . - 0 ID=cds.g11736.t1;Parent=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 21880 22028 . - . ID=g11736.t1.exon2;Parent=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 21880 22028 . - 1 ID=cds.g11736.t1;Parent=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 21708 21745 . - . ID=g11736.t1.exon3;Parent=g11736.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 21708 21745 . - 2 ID=cds.g11736.t1;Parent=g11736.t1 #PROT g11736.t1 g11736 MVLFLLLLLLYVSVRFWLVLVAIYQLVKITRVLGTDELFNYLEKYNIDLDPYYDDVLGRHTRKIWTRFVTTENQHLAVPEAIDFLDKLLRYDHQERITAKEAMDHPYFEPVRRKEGSGAQ* # ORIGINAL: g11731.t1 original gene structure, not modified by PASA NODE_484_length_22757_cov_40.0033 AUGUSTUS gene 3676 9420 . + . ID=g11731;Name=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS mRNA 3676 9420 . + . ID=g11731.t1;Parent=g11731;Name=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 3676 3788 . + . ID=g11731.t1.exon1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 3676 3788 . + 0 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 3901 4073 . + . ID=g11731.t1.exon2;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 3901 4073 . + 1 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 4347 4446 . + . ID=g11731.t1.exon3;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 4347 4446 . + 2 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 4660 5067 . + . ID=g11731.t1.exon4;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 4660 5067 . + 1 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 5256 5430 . + . ID=g11731.t1.exon5;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 5256 5430 . + 1 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 5603 6050 . + . ID=g11731.t1.exon6;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 5603 6050 . + 0 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 6267 7863 . + . ID=g11731.t1.exon7;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 6267 7863 . + 2 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 8039 8747 . + . ID=g11731.t1.exon8;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 8039 8747 . + 1 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 8953 9083 . + . ID=g11731.t1.exon9;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 8953 9083 . + 0 ID=cds.g11731.t1;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS exon 9294 9420 . + . ID=g11731.t1.exon10;Parent=g11731.t1 NODE_484_length_22757_cov_40.0033 AUGUSTUS CDS 9294 9420 . + 1 ID=cds.g11731.t1;Parent=g11731.t1 #PROT g11731.t1 g11731 MPLLKRKAYQTKPPPDDLKPDEDVFHIPFTNEVFRDYGEYIERMAQYKESIWSCRYTGKPQCTYVQALEAEEEACKDLEKFPQALAQPVLNMVHSSPVRLDHLVDKIIEAVKNKFAKGETVDAVIDGKSYTATITAVPQNATPFPTAIGAKVKQRTPKKAKKAEANEDTDDDVPLALIRKGPSATVSNAVSNAVSDEDDAPLALIARKSIGRSAPQTPVAAGGNAVGGNAANGHAAESADDGAYSVEYSVKGKTLAATVPAKNISRKKVGFSKDRLKTFLRVHARFVEEREGSGDGLWAVNRESAEKFGLDLSIDDEANLKKMLKKKKKKEKKKERRESKMMRQATLFDVGGVSKRTPSKASADSPSKGNSERKEKKLKEPPRKPTKEELKEAERQRAKDQRQRERERRQREVEEKRPKDDETVLDGALPLKGADVLADSLLPPSSIGDVLSLLEFATAFAQTLSIDRIPSYADFELAMTSEDSDGIVAEFLVVLTRCLAEWDGASVPNTGFGQPVSSLAVDSISAPEILRLYLQAKPFLCDTITPSVDEEHATATAEPMDGVEGVSAVADPIESGDRPGGVTEAAAVAPAAVGAVEGVGAEPMDGVVEARQSPASAGQLDAAILKRLETENFYAMDASSKARVFALVVAALLGTEEIGGVIDEAQEAIAELERQWYHEDMEFRRLEKEKEKEKKAAALSAASAGTQTGASATAEELAAAADVEIAQLRKDKEKKERAFKDDVQRHSVFMRLSPLGQDRNRSTYWHFSSVGGLYVEHASSAQPSAVTWGVYRTEADIDALLGTLNVRGIRERALHETLTVRRGDLADGLRRPQIGLSAEALAALLGKKVAERKSSRRGGDSQRPPLPLVEAARTHLANYGARLFEGAFLEWSTAVQDEWNSNVSAAETPEALAELLQGLEKGMVRRFLKPPFGTAEEKTATKRRTKADDAEEVEKAEGEVDVPIIDTAALWRDACAGTKSFSRVGLCVAELDKNVAWDKSVLNTRCKLCRRKGDDEHMLLCDGCDRGYHMFCLVPKVRKIPEGDWYCPDCRPRYTGSPSKKRRVEVNDEDEESDDAMETSDASSPKRSAPAPVAAKKGGKQAAHAPKSRAAAAVAQAANGGGNDSDKEDQCAVCSGTGELLCCDDCPRVYHLDCVNPPLRRVPRGDWRCPVCTKREGSRKRVDYSEDASGSPPNERRQARARAGGRGDKLGDELTLCRDLLLGLVKEDDAWPFRMPVNRKEVPDYYRVVEHPMDLETVRRKFDSLDYKDLDEFVADIELIFANCRQYNKPNSEVALCGEHMASLFDERMLLCFGRSRMLASRKRKR* # PASA_UPDATE: g4852.t1, single gene model update, valid-1, status:[pasa:asmbl_5812,status:12], valid-1 NODE_3272_length_3862_cov_37.2181 . gene 347 1578 . + . ID=g4852;Name=g4852.t1 NODE_3272_length_3862_cov_37.2181 . mRNA 347 1578 . + . ID=g4852.t1;Parent=g4852;Name=g4852.t1 NODE_3272_length_3862_cov_37.2181 . five_prime_UTR 347 349 . + . ID=g4852.t1.utr5p1;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . exon 347 469 . + . ID=g4852.t1.exon1;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . CDS 350 469 . + 0 ID=cds.g4852.t1;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . exon 754 887 . + . ID=g4852.t1.exon2;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . CDS 754 887 . + 0 ID=cds.g4852.t1;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . exon 1286 1578 . + . ID=g4852.t1.exon3;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . CDS 1286 1361 . + 1 ID=cds.g4852.t1;Parent=g4852.t1 NODE_3272_length_3862_cov_37.2181 . three_prime_UTR 1362 1578 . + . ID=g4852.t1.utr3p1;Parent=g4852.t1 #PROT g4852.t1 g4852 MIWNSDLVETLELQNLMLNAVQTMYAAEARKESRGAHAREDFPNRSDEYDYSKPLADQKKRDITEHWRKHTLSLMDETTGKIELKYRPVIDSTLSKEECKTVAPALRVY* # ORIGINAL: g4853.t1 original gene structure, not modified by PASA NODE_3272_length_3862_cov_37.2181 AUGUSTUS gene 2401 3862 . + . ID=g4853;Name=g4853.t1 NODE_3272_length_3862_cov_37.2181 AUGUSTUS mRNA 2401 3862 . + . ID=g4853.t1;Parent=g4853;Name=g4853.t1 NODE_3272_length_3862_cov_37.2181 AUGUSTUS exon 2401 3270 . + . ID=g4853.t1.exon1;Parent=g4853.t1 NODE_3272_length_3862_cov_37.2181 AUGUSTUS CDS 2401 3270 . + 0 ID=cds.g4853.t1;Parent=g4853.t1 NODE_3272_length_3862_cov_37.2181 AUGUSTUS exon 3564 3862 . + . ID=g4853.t1.exon2;Parent=g4853.t1 NODE_3272_length_3862_cov_37.2181 AUGUSTUS CDS 3564 3862 . + 0 ID=cds.g4853.t1;Parent=g4853.t1 #PROT g4853.t1 g4853 MSHSARSEARLRDQTNSGGSEPSERDSNGNNDIDGTVTVDFEDDNGEMNGSMLPGAIQTEEAVNEILLGSDTHIANNNNNNNNNNNTTQANSAKESDGHSHGRVDGDSIMSGGSHSQAASATADIYGEEDEALDEDNMFVDPVLSADNPDANNHEPGLPTRRKTLAFVNNRASLLEAKPSEFSKRMEMGQAAAEFNLRRRASLTKLNAKEPLVTDPTAIDSEGLHILRRRKSSIEALTEIDVGRRSSSLHLHHGTKKTMSFLEAPDKRLAAAVFGEQAAVRQELMKGTDEGSISSLIPVPFYKRIIHPLSPFRFYWDMCMLMCTLYIIIALPITLAFYLDGVGAAWFGINVFVDFLFLTDILLNFVQSQVQHIRSVGDEKEARGGDECV # PASA_UPDATE: g595.t1, single gene model update, valid-1, status:[pasa:asmbl_3791,status:12], valid-1 NODE_2215_length_7213_cov_59.0331 . gene 5311 6851 . - . ID=g595;Name=g595.t1 NODE_2215_length_7213_cov_59.0331 . mRNA 5311 6851 . - . ID=g595.t1;Parent=g595;Name=g595.t1 NODE_2215_length_7213_cov_59.0331 . five_prime_UTR 6827 6851 . - . ID=g595.t1.utr5p1;Parent=g595.t1 NODE_2215_length_7213_cov_59.0331 . exon 5311 6851 . - . ID=g595.t1.exon1;Parent=g595.t1 NODE_2215_length_7213_cov_59.0331 . CDS 5384 6826 . - 0 ID=cds.g595.t1;Parent=g595.t1 NODE_2215_length_7213_cov_59.0331 . three_prime_UTR 5311 5383 . - . ID=g595.t1.utr3p1;Parent=g595.t1 #PROT g595.t1 g595 MAEAWYVDEYECPVRTETWMVPASWFGFHGESLFVRECYMRLEAILRGYRDQRFAWLRSSPSGPNRTVGGILVTGTPGVGKSHFLMYLAAKWSCESSTTIVYHGVSGVKQSSALVFDGKSWTLRPMENCMDLLYNPSTIYLCDGLTRSPLGIHYAFTVAAFSPSNLFKDFMKADDRIRVYMPTWTLPELEMCRLTCYGQSVTKDRLESLYNQFGGVVRYTLGKAVLFLESELTAAFKDIITKVNFQSVLTMVGSIESWDNPDIVHRAVHLVVQNDNFTEVIARFASQAIVDSVMDKGNHEQMFRSIDFVRNNTDPLLAGLRGQVFETLVHRYFRRCQTLQLDCRPLVPGLAAQSKIDFIAVGSEVLTVPRDLEQFVDGTYAVSKSRTFPSIDSALLPDTLFQVTVSSTHGIHGATLQKLVTALSARSRSLTKVRLFFVVPSDVFPTFRAQAYLTTKNVQYQLMPRFDLEVEQWVAEMKFT* # ORIGINAL: g594.t1 original gene structure, not modified by PASA NODE_2215_length_7213_cov_59.0331 AUGUSTUS gene 882 3411 . - . ID=g594;Name=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS mRNA 882 3411 . - . ID=g594.t1;Parent=g594;Name=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 3260 3411 . - . ID=g594.t1.exon1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 3260 3411 . - 0 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 3025 3175 . - . ID=g594.t1.exon2;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 3025 3175 . - 1 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 2745 2859 . - . ID=g594.t1.exon3;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 2745 2859 . - 0 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 2205 2297 . - . ID=g594.t1.exon4;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 2205 2297 . - 2 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 1781 1984 . - . ID=g594.t1.exon5;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 1781 1984 . - 2 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 1444 1598 . - . ID=g594.t1.exon6;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 1444 1598 . - 2 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 1218 1299 . - . ID=g594.t1.exon7;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 1218 1299 . - 0 ID=cds.g594.t1;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS exon 882 988 . - . ID=g594.t1.exon8;Parent=g594.t1 NODE_2215_length_7213_cov_59.0331 AUGUSTUS CDS 882 988 . - 2 ID=cds.g594.t1;Parent=g594.t1 #PROT g594.t1 g594 MDGHGHAAADTTAAGCGPMSLSSFAGYTVGYWLSERKQSHLSFSDFVERASKAGLRLVAIDLSRPLTTQGKFDVVLHKATDLVVAAESGDEEGKMWLKNLQDYEEANRNAVFLDPLKCVRRLTSRQATFDELRPWAEEKGILNIPPFATVLTTEYDATERLQEANVKYPIIAKPICAHGTKQSHQMALVFNAAGLANIPLPFLAQEFVRHTGVLYKVFVIGEEYCVARRPSMRNFQADDTRETIFFDSATISKADSCSQLNAAFDPDGRTDTSLSPTTVDALVTFLRIRLNLSLFGFDIIVEEGTARHVIVDINYFPDAIIELPNSSPMLHMGFVIISSSLFGCDRHKHTHV* # PASA_UPDATE: g3603.t1, single gene model update, valid-1, status:[pasa:asmbl_9058,status:3], valid-1 NODE_723_length_18597_cov_43.968 . gene 11326 12949 . - . ID=g3603;Name=g3603.t1 NODE_723_length_18597_cov_43.968 . mRNA 11326 12949 . - . ID=g3603.t1;Parent=g3603;Name=g3603.t1 NODE_723_length_18597_cov_43.968 . five_prime_UTR 12751 12949 . - . ID=g3603.t1.utr5p1;Parent=g3603.t1 NODE_723_length_18597_cov_43.968 . exon 12321 12949 . - . ID=g3603.t1.exon1;Parent=g3603.t1 NODE_723_length_18597_cov_43.968 . CDS 12321 12750 . - 0 ID=cds.g3603.t1;Parent=g3603.t1 NODE_723_length_18597_cov_43.968 . exon 11326 12203 . - . ID=g3603.t1.exon2;Parent=g3603.t1 NODE_723_length_18597_cov_43.968 . CDS 11488 12203 . - 2 ID=cds.g3603.t1;Parent=g3603.t1 NODE_723_length_18597_cov_43.968 . three_prime_UTR 11326 11487 . - . ID=g3603.t1.utr3p1;Parent=g3603.t1 #PROT g3603.t1 g3603 MCGPSRVDEPGRVETVPLAAKDARGVTKASRCVSPLLGGRSSVYALLTGNVSDSVLIGMHGTDSAAPSHGSLSSDFKSILRSRLLAASARSLIVQERTGTAPTGVSSNGAVLVGPVDPVANSVTIQAPKDEAAHGASDSRGRKAATIKDLRASIRASCAQKIQTTFWQAPIRLQDLPRGLHDGAEDRSVDAKGAVNTPPTPTSARGGFSYATPTPSLSGEPAYSASSRGVNGFGMHGDVDESSNRSPSSFELETAEAAKSLFQLGNAVRSWSPESLVSSEGATACAPQCPTFSLGRASWGSGVVVNLPPTPLSFEDQRALPVSSASYQLPHMQSSAHMYGAYHMGGRGSRETFEDNHPDFRGTATQQLRRNQFSIDHILSS* # ORIGINAL: g3604.t1 original gene structure, not modified by PASA NODE_723_length_18597_cov_43.968 AUGUSTUS gene 13922 18353 . + . ID=g3604;Name=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS mRNA 13922 18353 . + . ID=g3604.t1;Parent=g3604;Name=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 13922 14045 . + . ID=g3604.t1.exon1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 13922 14045 . + 0 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 14226 14281 . + . ID=g3604.t1.exon2;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 14226 14281 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 14396 14567 . + . ID=g3604.t1.exon3;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 14396 14567 . + 0 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 14714 14857 . + . ID=g3604.t1.exon4;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 14714 14857 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 15062 15262 . + . ID=g3604.t1.exon5;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 15062 15262 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 15390 16307 . + . ID=g3604.t1.exon6;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 15390 16307 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 16625 16757 . + . ID=g3604.t1.exon7;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 16625 16757 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 16935 16989 . + . ID=g3604.t1.exon8;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 16935 16989 . + 1 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 17141 17225 . + . ID=g3604.t1.exon9;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 17141 17225 . + 0 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 17364 17533 . + . ID=g3604.t1.exon10;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 17364 17533 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 17808 17880 . + . ID=g3604.t1.exon11;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 17808 17880 . + 0 ID=cds.g3604.t1;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 18181 18353 . + . ID=g3604.t1.exon12;Parent=g3604.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 18181 18353 . + 2 ID=cds.g3604.t1;Parent=g3604.t1 #PROT g3604.t1 g3604 MAEGASVENGGAQMAPASTVEGKEVVAEDLKPTEDVATGTAGTEIQIDLKIPGQSAVQITVQTTDTVQDIRQFVYDYETTCHLTCFHFELGGVTLAENVEISTIEGFIAGAVVDVCEDEYGEMDVLVQVRRLRELLVPIEELALDGSGNISPSVFASVALSKYGDDPAPKGKEKKDALSKTLVAALFDRDPLAGSDLTTFYPPAMGTQPTHRCLNSLHMSGWNPVPLDRMIRGDIAYIDVVTLEDAYLCVTAIPTGFFVNRSSRVEFDPQQHQSRTGTFKTLSSLIAANSPGYKREFAELCHQVAARTPLEFMPAPVRLAPWVAFPHERVAAAAAAQKEKEQKGKGSQSRKGNNSNAHHHAQPLTRRYDVARFDDALIGGSSSMPLGTVRNLEDTAIASASQTRDWNDEWQSVLELPSGTPEDRIARDRAAHRIAGDFTAAAQRLVVDVAEGRIPALNPSEAPRNRMYVSNNMFVCRAVDNRDYHKPMGGDGAARHAASKDLQGVLAVNSLMVEKLHTVASAVVDYKGQRYTAQSIIPGIFRQDHEQIVVFGSIDRGEKIGSDARFHEALEQVGKFLGLKEHTVIDDNGAEFRMRTSVEVKGIMGSDGRRYVLDLFRTTPVDTNYVDWKPTAIVEDEAVFEAVLSGHHVPSTHGMRLLRRELLSAYSEAKFFDLVRAKYEQKKAQKESEKKAAVADPNNPPEEPTEEDEQIDINDPELQSFTFEVNTDVFAHDAKRLVNDATNSEVEADENVVRDIAKFLLHATIPKF # ORIGINAL: g3599.t1 original gene structure, not modified by PASA NODE_723_length_18597_cov_43.968 AUGUSTUS gene 1 514 . - . ID=g3599;Name=g3599.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS mRNA 1 514 . - . ID=g3599.t1;Parent=g3599;Name=g3599.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 1 514 . - . ID=g3599.t1.exon1;Parent=g3599.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 1 514 . - 0 ID=cds.g3599.t1;Parent=g3599.t1 #PROT g3599.t1 g3599 MLVPPRVRRVTIQCVALAFTVFAVAHWNAIRAAVRIPADLTELLSGNQQVALTPTTATRNEVALVDLMTDEKSTNRNDGDSVDSRRAAAANKNVRILNILTERDKLRARCHNETVAKIQRIIVLGDPAWAKIYGGLYSFAAGSETVVSATGQKLHFVSVHTNPSASLDDPG # ORIGINAL: g3600.t1 original gene structure, not modified by PASA NODE_723_length_18597_cov_43.968 AUGUSTUS gene 995 3190 . + . ID=g3600;Name=g3600.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS mRNA 995 3190 . + . ID=g3600.t1;Parent=g3600;Name=g3600.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS exon 995 3190 . + . ID=g3600.t1.exon1;Parent=g3600.t1 NODE_723_length_18597_cov_43.968 AUGUSTUS CDS 995 3190 . + 0 ID=cds.g3600.t1;Parent=g3600.t1 #PROT g3600.t1 g3600 MRSGAFMTRLQGGAGRSARALKVSRLDVIRRIQVVSVVGFGLIVFVAILYYVNLVQLSEVKGSFSVGGCEGEQCEGNAVQLSQTAALSSYASTELARAEPLLLQTVASDPNIPSIDSAHASVATHEAITTGLSGTTSPLAIATVTVTSEVAIDSHVAPTSTSPVGMATVTPTAATEVPLHPPVAFPSSSRSADAVIHIATGLAAVPPYLSSGSAPGVSATTYPPVQPSPNPARDGDIPKYLFAVQVYGPNNQYYTFIDGIKVARALKRTLVRIPYIDHSSNLGHYTFKKPTELTFDVDRLDAVLGALGVRTIGDSAFSEALDKSNRTLDFCLQTQTNERYGQICRQLVGGASCKQSFHVDSRNWPEIGDYSEASLRTRFRENVTDVPILSIDTLFWANKFYKPYRRTLLHAGLSYRDEHLQILRGLTHAKGIVGAATAFISAVLGGVEKPSYLAAHWRRADYSDRPNCTNLPQCVDAVSRDDLITLLNNALLTVRSSGELPWSAVPVVYLATNKPVSAEDHQAFAASGYPRVITFNSSIVDPGEPYYVSLIEQEICLRSLAFVSSRISTWSDRVLETRIALGYRHTWSSASMLRSEFDPTPLAIPASALALSKSLSWPETFVCGYEYMGVSHETPTVMSLICPPGTVVSSVVFASYGAPIGVCLMFVTDPRCHDPTSVDVVRELCVGKTACELPVTSTPLTSRGFGMARCETGGFALAVSLQCTLIPPGTP* # PASA_UPDATE: g3602.t1, single gene model update, valid-1, status:[pasa:asmbl_9057,status:12], valid-1 NODE_723_length_18597_cov_43.968 . gene 9949 11047 . + . ID=g3602;Name=g3602.t1 NODE_723_length_18597_cov_43.968 . mRNA 9949 11047 . + . ID=g3602.t1;Parent=g3602;Name=g3602.t1 NODE_723_length_18597_cov_43.968 . five_prime_UTR 9949 10005 . + . ID=g3602.t1.utr5p1;Parent=g3602.t1 NODE_723_length_18597_cov_43.968 . exon 9949 11047 . + . ID=g3602.t1.exon1;Parent=g3602.t1 NODE_723_length_18597_cov_43.968 . CDS 10006 10986 . + 0 ID=cds.g3602.t1;Parent=g3602.t1 NODE_723_length_18597_cov_43.968 . three_prime_UTR 10987 11047 . + . ID=g3602.t1.utr3p1;Parent=g3602.t1 #PROT g3602.t1 g3602 MSAHRSAIAAAGRVALTRSFHASALRSESAQQKTFAPKKDLMLPKGTFDGKVAFITGGGTGLGRGIATALSSLGAKVAIASRTLDVLETTAQDISKKTGNQVIAVRADVRDAESVKTALDTVVDKFGLPDCVVNNAAGNFVAPFERLSPNGWKTIVDIVLSGTALVTLDVGKRLIAAGKGASFVNISTTYAKSGSAFVVPSAAAKAGVEAMTKSLAAEWGRYGMRFNAIAPGPIETKGAFSRLDPTGEFRKMMLGRLAANRMGEVDELANLATYLLSDYASWMSGEVVVFDGGETPLISGEFNPLLKVTPQQWDMMEAAIRKVKGS* # PASA_UPDATE: g3601.t1, single gene model update, valid-1, status:[pasa:asmbl_9056,status:12], valid-1 NODE_723_length_18597_cov_43.968 . gene 5462 9455 . - . ID=g3601;Name=g3601.t1 NODE_723_length_18597_cov_43.968 . mRNA 5462 9455 . - . ID=g3601.t1;Parent=g3601;Name=g3601.t1 NODE_723_length_18597_cov_43.968 . exon 8480 9455 . - . ID=g3601.t1.exon1;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . CDS 8480 9455 . - 0 ID=cds.g3601.t1;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . exon 7335 8338 . - . ID=g3601.t1.exon2;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . CDS 7335 8338 . - 2 ID=cds.g3601.t1;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . exon 5462 7174 . - . ID=g3601.t1.exon3;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . CDS 5531 7174 . - 0 ID=cds.g3601.t1;Parent=g3601.t1 NODE_723_length_18597_cov_43.968 . three_prime_UTR 5462 5530 . - . ID=g3601.t1.utr3p1;Parent=g3601.t1 #PROT g3601.t1 g3601 MLPVSPFSKRLNRASDAARNSQAKKRLANDFSDEEDGSGANGHRLKRARGDAIPPKRRPFSYIPVVGNDFGSDNGAAPIKATQSAAPLRNSGGMLRTQLGSGTGIISSLVPSKQSTTPFVAGNAKNAPLLASIVSSRPRASDANQSVLGKKEVKSNFDGERQFVMPSGRFHRRLSVVAAVDESGDANAKPVQEDEVSPVTRDAEDAFVREMNARMLGEDLQGKGRYFRVRVGQAQQDTASDFRPPPAHSRPRRGGDVQPTGNYVRTNLRNKNFRRGARSLSSKVLRKIQKEQRDARIARAEGNTAADESVPNVRRRKGPTIKAADGSTVANMRVEAGSIGEDGSECTDDETSREPATPIVEDPTVNLIPTLSSVFGLEDGFRPGQEETIRRILRGESALTVLPTGAGKSLCYQLPAFLACGGKTGAVCVVVSPLLALMDDQELHLPPAIKGSVVRGALSKTAWERVASSLRAGKVHVLFATPEAVAGNALQRMMRDGNVSRLAFACIDEAHCVTEWSHNFRPSYAKLNSVLRDTLNCQTILALTATATVRTSCEIASALEISAENVVRGPAVPPNLRLTASVEHDRDAALARLLQSPYFGPGCGTGGATIVYCARQADAERVAIAMRTRGIAGDCEAYHGGLSAAERKRVQACFSRGKISCIAATVAFGMGIDRSDVRRVIHYSAPPSLEQYVQEVGRAGRDGSPAFGHAFLDPADECLYRARCDADCPSEPHMLRIVRGLLRLGSDDTRIEAPPPANEEDNGNARNDGNRGRPSLKAQNDRASRIGEGSEGREELPPKTLWDEVETAVRAAKVTGNGNTVRRRLVLVPSQAEFALDVRMETIMTVLTHLEEAGAVSVRPSVRVGDLERGSWENALVSADGAGAGTASESFGGGFGRGFGGKRWGRGRKNKFRGRSAFSEDSAAPAEYAACYELEDGWDPSPEAVAELNGSLCAHFEAMRDSQRGRISRVFGCLASAAVGKTVSEIYPPAQRHTDDLDLDEGLHRRSRAGSGPGDNAAADYCSSAIVGDISRYFCQGGDGDGGADYAPKMQLAPSQAVLDRASDEILSFVRRNRSVGGLNGRAVACILLGIGTPRFKARDWARAPGWGRLREAGCDFSWIRSRATVAQFPALEGARESESDGGDGDGNADEAPDAYANLNSNQSDSEESVIEDDANLLQNVEAVDSEDPDDDCRGAEWEAGPRELVD* # ORIGINAL: g11252.t1 original gene structure, not modified by PASA NODE_1305_length_12271_cov_53.004 AUGUSTUS gene 161 3533 . - . ID=g11252;Name=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS mRNA 161 3533 . - . ID=g11252.t1;Parent=g11252;Name=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 3417 3533 . - . ID=g11252.t1.exon1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 3417 3533 . - 0 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 3060 3222 . - . ID=g11252.t1.exon2;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 3060 3222 . - 0 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 2355 2871 . - . ID=g11252.t1.exon3;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 2355 2871 . - 2 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 2030 2174 . - . ID=g11252.t1.exon4;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 2030 2174 . - 1 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 1540 1682 . - . ID=g11252.t1.exon5;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 1540 1682 . - 0 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 1172 1238 . - . ID=g11252.t1.exon6;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 1172 1238 . - 1 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 756 939 . - . ID=g11252.t1.exon7;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 756 939 . - 0 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 496 550 . - . ID=g11252.t1.exon8;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 496 550 . - 2 ID=cds.g11252.t1;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 161 307 . - . ID=g11252.t1.exon9;Parent=g11252.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 161 307 . - 1 ID=cds.g11252.t1;Parent=g11252.t1 #PROT g11252.t1 g11252 MEQVQSVFKQVQAHPQYKVAADYVHHATEEATTFLRNNKEVQTAVHHANVAAATARTWINTQLTGYEPWQIIALSFVAFYVLYRIRNFFVRDEGFVSRFKKSFFAFVKALPFVRGLVAKEMAKNVRHIEESMFKTVPKDYVHQTLPRRGLSSGELMKELEYYRSMGEVKWEEGKVSGTVYHGGKEITDLAEKVYGMFAWTNPLHPDVFPGIRKMEAEVVEMVLRLYNGKTGVTCGTMTSGGTESIIMACKAYRDRGYENGITKPEMVIPVSAHAAFDKAAAYFNMKLVHVPVDPKTRRVDVRAMARAITSNTVMIVGSCPSFPHGVIDPIPELSKLALKHNIGLHVDCCLGGFLVPFMKEAGFEIPVFDFRLDGVTSISCDTHKYGFSPKGSSVVMYNSHELRHYQYFVAPNWTGGIYASPSIAGSRPGAIIAATWATLMHFGKEGYIESTKKIVSTAKKMEKELREIKGIKIMGSVDVSVVAIGSDDFDIYQLGQQLTNRGWNLNSLQFPS # ORIGINAL: g11255.t1 original gene structure, not modified by PASA NODE_1305_length_12271_cov_53.004 AUGUSTUS gene 9514 12053 . + . ID=g11255;Name=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS mRNA 9514 12053 . + . ID=g11255.t1;Parent=g11255;Name=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 9514 9928 . + . ID=g11255.t1.exon1;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 9514 9928 . + 0 ID=cds.g11255.t1;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 10402 10554 . + . ID=g11255.t1.exon2;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 10402 10554 . + 2 ID=cds.g11255.t1;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 10950 11100 . + . ID=g11255.t1.exon3;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 10950 11100 . + 2 ID=cds.g11255.t1;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 11347 11491 . + . ID=g11255.t1.exon4;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 11347 11491 . + 1 ID=cds.g11255.t1;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 11867 12053 . + . ID=g11255.t1.exon5;Parent=g11255.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 11867 12053 . + 0 ID=cds.g11255.t1;Parent=g11255.t1 #PROT g11255.t1 g11255 MFLRHSASASSARAAVDGESLSRADAAAAAGSRPPDSADDGALRRGPVEDRAKISDVMNGTCVDVRIDGISSATLIDSAVERGSRTSASAPETVVPAIGRRQVCLMRARPEDVDAAPISISEFAQAVEKCGLKKTDSVALAVSGGVDSMALALLSVRYFNSAYSMTIDHGLREESTEEAQTVRNMLSSIGMDGAILRVDWGHQGAPSTAIQEVARSLRYTLLSRECAQTGRTKLLAAHHLDDQLETVARRLFRESHVDGLAAMRTTVPMAEFGLPHITLNRPLLSFPKERLVATCAKYGQAWAEDPSNGKLVYQRNRIRSAINELGEDGRRALATINLAAVNFTADIGRV # ORIGINAL: g11253.t1 original gene structure, not modified by PASA NODE_1305_length_12271_cov_53.004 AUGUSTUS gene 4362 4976 . + . ID=g11253;Name=g11253.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS mRNA 4362 4976 . + . ID=g11253.t1;Parent=g11253;Name=g11253.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS exon 4362 4976 . + . ID=g11253.t1.exon1;Parent=g11253.t1 NODE_1305_length_12271_cov_53.004 AUGUSTUS CDS 4362 4976 . + 0 ID=cds.g11253.t1;Parent=g11253.t1 #PROT g11253.t1 g11253 MACTIPLTYSYLCELPEFSRALSEWNFSKWPECCKDLGVPTVDAFFAELVRNNAPASTTPPTALPFTIVATIPADEVRAYVHSAGGTAIDSVPIAHGRALVATATLETVDTTLPHIRECTPWIASVQVHPSFRRRGVAREVMRHAEKEAFERLYEPIMYIWCEPSLAPFYGGQLGWEEFDRSPYLNYAQVVHMRKTRDTWTAQQ* # PASA_UPDATE: g11254.t1, single gene model update, valid-1, status:[pasa:asmbl_1155,status:12], valid-1 NODE_1305_length_12271_cov_53.004 . gene 5355 8741 . - . ID=g11254;Name=g11254.t1 NODE_1305_length_12271_cov_53.004 . mRNA 5355 8741 . - . ID=g11254.t1;Parent=g11254;Name=g11254.t1 NODE_1305_length_12271_cov_53.004 . five_prime_UTR 8668 8741 . - . ID=g11254.t1.utr5p1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 8415 8741 . - . ID=g11254.t1.exon1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 8415 8667 . - 0 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 7861 8073 . - . ID=g11254.t1.exon2;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 7861 8073 . - 2 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 7124 7609 . - . ID=g11254.t1.exon3;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 7124 7609 . - 2 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 6592 6655 . - . ID=g11254.t1.exon4;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 6592 6655 . - 2 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 5980 6122 . - . ID=g11254.t1.exon5;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 5980 6122 . - 1 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . exon 5355 5856 . - . ID=g11254.t1.exon6;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . CDS 5681 5856 . - 2 ID=cds.g11254.t1;Parent=g11254.t1 NODE_1305_length_12271_cov_53.004 . three_prime_UTR 5355 5680 . - . ID=g11254.t1.utr3p1;Parent=g11254.t1 #PROT g11254.t1 g11254 MSLSKRSVAKRNRTLKGRIFGEDGEARDGANTSRTFLAASLYVDNDGPVEMERVSYVDNHHSSARASGSGNGATDYNRNPASFRETSIDQPQIGLNFNCALTNVDDTSHHFEVDFDILMHGELPAELRDTSPNAPDRFVAVGESDELREKIFMPEAYIWNVDEESNNGVNVYINRRRGLVLYQQNYIAVWRQGLDLRRFPFDRHMLHMPVSFQNCQVHEWTIDLSDCTDVPFTFQASFQCYTSLGNWKLYDAEQRFEPDRRDLCLILLRVERLSKFYTVNIAMFMFLIALSAGSVVALPPDAFTDRQSITLTLMLTAVAFKYIVTQQLPPVSYTTYMDRYILASFLLIVVVLVENLILVLLGETQAGVLSEEQQKTWDRSFIGIVTGLWLVLHGAYMFIPEQKLRLDWTEIEERRPKTIQRRRAIVTQWKRLSTAKSQMEGIIQ* # ORIGINAL: g7540.t1 original gene structure, not modified by PASA NODE_497_length_22416_cov_60.1984 AUGUSTUS gene 4980 15202 . - . ID=g7540;Name=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS mRNA 4980 15202 . - . ID=g7540.t1;Parent=g7540;Name=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 14407 15202 . - . ID=g7540.t1.exon1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 14407 15202 . - 0 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 13782 13901 . - . ID=g7540.t1.exon2;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 13782 13901 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 9921 13556 . - . ID=g7540.t1.exon3;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 9921 13556 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 9116 9595 . - . ID=g7540.t1.exon4;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 9116 9595 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 8700 8819 . - . ID=g7540.t1.exon5;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 8700 8819 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 8129 8466 . - . ID=g7540.t1.exon6;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 8129 8466 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 7530 7630 . - . ID=g7540.t1.exon7;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 7530 7630 . - 0 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 6122 7173 . - . ID=g7540.t1.exon8;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 6122 7173 . - 1 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 5590 5842 . - . ID=g7540.t1.exon9;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 5590 5842 . - 2 ID=cds.g7540.t1;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 4980 5277 . - . ID=g7540.t1.exon10;Parent=g7540.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 4980 5277 . - 1 ID=cds.g7540.t1;Parent=g7540.t1 #PROT g7540.t1 g7540 MSGASDRNSCLGVPIPIIPMRHTNQSSSSGDGTHDADEDLELDGRATSLVFCRRFSSGVPSTLWAQSQLVVLRLRSCGLDHIDDRIGQLSNLRVLDVSWNLLVILPDTIGLCRHLEELDISFNKVRALPSTLADLSALWSISLHDNELATLPSFFGTMPSLREIDANYNRIAIIPPEIVASRSLVWVRLLGNPVVGTQISYDLTLERWQTAAAELRKNTPADLRSAGASSSSQALGAMDASTAVGRPRIVSPHRLVAPDASEHGAGWDAPNDDGDEESDVVRAIRLLRKHNPSLIAEMMSIVNREDDVDLASLRRSFNSSSAMTYSHMSSDSSSVSSQDYPYEINFADPFGFTESNYRAFAGIEGGASRRGGVEASAALGSDATDSNGQSAVPDVRPFDDARAQREETLGQRLIREQRRELQQLMSELPSVHPSSSAQGTGRTAGTSSAPMPSLSGAMRSSTPPALQLNVSERDAAQRAAHTSMVDAQAAVSHAPTHTERLAEQRRLEAMQRSLLSHQRSNVTPAATNSIQGASGDGDGRLPPQPRSHLQTQNMSSNGIAPSSSSAPFAWLTRWRRPVDYDDEDSSDIVHGDAPREVNEVSSSSHDEGTHVPAWTHWRGAAVPAETMDGMDEVGDEDGDGDGDADESSRRVCVPVDRCDPSDLVALENDAEVARDARDSGDGSEGTEDSESQWTTDDEDECEYGQNRAGGRGIGKEGGIGNVRGKQCATDSHHDDATVEELAGLESVQHQLEEIDRKLARLAAARASEDHVPVVVRTSPDSPHAHVTLAAASNAGRTSVNVNNNTNNSSAGTSIVHSVPPATSTGPGSNAASVSRHMHVGNPFGASHSSAMPSPAIQSRVSTVAGNGAAPAAPLSSRQEWWREDRSRRVAERGTMQERAREIAIHRTRVEQGEDLLDELRALDVDFEAITGDIAEAAQVESPGRSSIVRDFVDLQERLGVLRRRMAASGYGDLASVGMGSTGYGDDDDEDGDEGEDAVLMVAIENAAIAADAQRAVFTGGRSAASVTRQQTSRSASWPVVPALVDDSDSHSDSHSDSDSNDDGTDGLPDLSYLEDESSMSDGSDHLPPLLDSSLYSSMLSLPPLLPSNVSGIDDSNSLPSMCSDDGSATEDSSDEFSLPGLESTDDDSDSMPSLDIDTDVNDHTSRVSNLPIGHRLLRQWGAVHARAPRLADDDWIPELLTDSDSDLEYNFLSAGRTRLRAGGPVAGGGGTRDAEELSSVVTDSDSDDELGVSLNDRSNQFDAMRRLVGLGNNGSASAFDQALAAIENGSNDFAELEGALDDTAVLDRLSETTDFIAALHAAMAAGRNLPMRHAAPPIQPPPPPRRTQRRGIAPVGMPLDVRRQCHVLKLRRDEQRSRFLANVRRGSFSRVGRATFRDVPVEFFVSARPTSPSKLRVTVPPSSLGDDHVAVGSSSGADIDDSLVFDGEGGDCSVDDGVIGVRDAGEEEVAGRAASLLDAEVTCVEYIRCVSMDGDDFFVPKEVACHSALFRRILDGGGEYRETNRGEITLGSIGSHVLNSVLSFCFKDHNENCVGRGIACGMAGHLTTDTLPGSGGHPDRPDSCSRPQSSMSFVDENARPESALALLDRSFTDASVVTLVTEVVDSRDSCTQPGPSRVRFVFELAPETVMETLAAAHYLEIPPLVEHACRMLADNLEDVPTLVGMPPDLQWTLLCMLDPARLLHVESSGKFDPSCGLDTSVLWRRLADMRRLLLPDGRSLNLSEQRRNHLLSICPLLSSTVGLDGPLWAFAERVCAEVDAAIPRARGGDGADDEGVASVALWRRLVLEHDLQERIDSFGAGRPVTMHSTSANRRAELLLFIERAGPHILRHSIKPLALLMSGLRWASYASSLCNLRTVEFSGTRLDVNDVAQLKSFLGSNDPKTETDCSTSNKREVDDPLSLRLRCDISSSETHASTINELGIPASVRSGPVSSLRSVILRDCRLRDELVDGVCDALSGTLVELLDVSENGLTAHGLTVMAKRLLPRHKVPQVTSDITWPSSVHSTHHSRLFGGASASASASARVGMVIEGGCPRLRQFNVAGNGCGLKVAYSLAPARYGRQAVTSKSNEGIAAVLATLRCFSNLGRLESDEDDDDDDDDEDAEEQYALEAAVRMSLGQPAPEVRSAYGRVHGRVRKGSAHYAGLEVLDLSGNQINCALVPREAWQALKLSKTLRVLDLSDNPVGPPASVLFGLEDIMLPFTMHESAGVMQHLWNSLPRTLTVLCLARCRLEDEHIASLCVALEDNMTLTRLDLRGNTIGGLSCLHIAEMIERNEGLESLLLGDNEIGFDGSQTIAESLPLNTCLIHLDVSRNVLDFPAARSLVLGGCTATALRLLDVDMNDLTHVERNKLREMACDHRKKEKRPVLQVLAENDARG* # PASA_UPDATE: g7542.t1, single gene model update, valid-1, status:[pasa:asmbl_7759,status:3], valid-1 NODE_497_length_22416_cov_60.1984 . gene 18241 21587 . - . ID=g7542;Name=g7542.t1 NODE_497_length_22416_cov_60.1984 . mRNA 18241 21587 . - . ID=g7542.t1;Parent=g7542;Name=g7542.t1 NODE_497_length_22416_cov_60.1984 . five_prime_UTR 21348 21587 . - . ID=g7542.t1.utr5p1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . exon 21252 21587 . - . ID=g7542.t1.exon1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . CDS 21252 21347 . - 0 ID=cds.g7542.t1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . exon 19554 21098 . - . ID=g7542.t1.exon2;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . CDS 19554 21098 . - 0 ID=cds.g7542.t1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . exon 19017 19214 . - . ID=g7542.t1.exon3;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . CDS 19017 19214 . - 0 ID=cds.g7542.t1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . exon 18677 18874 . - . ID=g7542.t1.exon4;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . CDS 18677 18874 . - 0 ID=cds.g7542.t1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . exon 18241 18417 . - . ID=g7542.t1.exon5;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . CDS 18268 18417 . - 0 ID=cds.g7542.t1;Parent=g7542.t1 NODE_497_length_22416_cov_60.1984 . three_prime_UTR 18241 18267 . - . ID=g7542.t1.utr3p1;Parent=g7542.t1 #PROT g7542.t1 g7542 MALQDLVGAECGGSNPFMKFVQHFTEDKALGQERDRFVPEDYQEDGPSNYPTERDAYAFDDMQGELDAMGPDPSTPPVAQHIDDRLALEWASDFDAAVPTALTRQVGPMRADPRRWADEFDYARPHHAPPEHPRPIFHEDGRGGVARYAPETNRRGPVPPPPTSMQARHARGTPMTADSLAAEFTAYAGPGHVHASPWARDYLEREPGPSSSADWGETAAAVRARQSSAKTQQQQKENATEEEDAELKWTAAALSRMAEKDPKLHNSQFMSFVRDLGGVTKAEATVPDWSSEYAAQANEDPRAAYKWAEEFAARSLDGASSEDSRAKAWLDEFTRARDGFGVISGENEEIFGGESDWAAQFAKEVAGEGASSEATGLDDMRREWERLLSARKDEDDFAFGEASTSQSQAANEPPKSWDEYPFEVENPYADATDAFARGMELLSAGNLREAILAFEAEVKGNEGNWRAWLHLGIAQAENEWDSAAIAALRKCVGINPSAAEGQLALSVSYTNEGRSDLAYEALMGWMMSVEAYKSLAQGQVEGPVGYESEVADGFTPMPGRHAEVRNRLLAAARLSPSELDPDVQIALGVVFNISMEYDKAVDCFNAALNSRPDEYILWNRLGATLANGGRSEEAVSAYYRALELRPGFIRARYNLGVSCINLRAYNEAVEHLLTALSMQARADRPPADSMSDTIWGTLAMATAMMGRNSLSDAARAKNLEAFRSEFEF* # ORIGINAL: g7539.t1 original gene structure, not modified by PASA NODE_497_length_22416_cov_60.1984 AUGUSTUS gene 1454 3377 . - . ID=g7539;Name=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS mRNA 1454 3377 . - . ID=g7539.t1;Parent=g7539;Name=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 3058 3377 . - . ID=g7539.t1.exon1;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 3058 3377 . - 0 ID=cds.g7539.t1;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 2689 2759 . - . ID=g7539.t1.exon2;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 2689 2759 . - 1 ID=cds.g7539.t1;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 1957 2283 . - . ID=g7539.t1.exon3;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 1957 2283 . - 2 ID=cds.g7539.t1;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS exon 1454 1632 . - . ID=g7539.t1.exon4;Parent=g7539.t1 NODE_497_length_22416_cov_60.1984 AUGUSTUS CDS 1454 1632 . - 2 ID=cds.g7539.t1;Parent=g7539.t1 #PROT g7539.t1 g7539 MTKSRRCVALEDWNDLEGALEYEYSEDAYYADEGDADHVCDDSGFYDESSEASSPAVASQAQSQQPSVVGSPKSSRADDVGPGCAICFEDLFEESKGILPQCRHSFCLTCIVKWARVNPRCPLCKIHITHVDSHFELDGTYVDVMKPNLLSLMAKTRWLLALDDDVTPDEPKGISIGGWSGRQSGYDRHYSQGRHGGHAYIDDDGLGDYAVYSMYEDEFEPTNYAPNKGKAGRNQRISAGGVSIHPSAAKNAPHHTGSLPTNATNTHSSSSVESTKKLGRRARRRSSHSMSECDAAAV* # PASA_UPDATE: g7541.t1, single gene model update, valid-1, status:[pasa:asmbl_7758,status:12], valid-1 NODE_497_length_22416_cov_60.1984 . gene 16163 17968 . + . ID=g7541;Name=g7541.t1 NODE_497_length_22416_cov_60.1984 . mRNA 16163 17968 . + . ID=g7541.t1;Parent=g7541;Name=g7541.t1 NODE_497_length_22416_cov_60.1984 . exon 16163 16544 . + . ID=g7541.t1.exon1;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . CDS 16163 16544 . + 0 ID=cds.g7541.t1;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . exon 16724 17004 . + . ID=g7541.t1.exon2;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . CDS 16724 17004 . + 2 ID=cds.g7541.t1;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . exon 17243 17968 . + . ID=g7541.t1.exon3;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . CDS 17243 17728 . + 0 ID=cds.g7541.t1;Parent=g7541.t1 NODE_497_length_22416_cov_60.1984 . three_prime_UTR 17729 17968 . + . ID=g7541.t1.utr3p1;Parent=g7541.t1 #PROT g7541.t1 g7541 MVSLDILSHIGFGFLCASYLATNIIALRTLLFIGNCVLIAWGALFLKSESTVAWNAAFAAINFLQILWLSYQKFYILKLTPEEASLYRTVFRTLPKWHFKQLMRRAIWKTYASGETIIKEEQDVNELGVVYEGVAKVIKEGKDLAFVGSLEWFGTVEYIFEEPAGVSIVAVEQLRAVTWAKDDLVKVLKENPVVGSAFSNLVALDLGIKLTRMDRNYLHGDADAVYPYSRVGDAISMFQRIEKANAQQRNAEPKREVPLGQRILSLFPFTKAGRKTAIVGDSVGGTDLDSHHDAHGASTPRSGFIAARRGSAWGMSPSASNVIVTKGGKPVVSRQHSKKKMHQVAPEETTTHVPTRKVSRSEEHAHARRSSHDDEAIEIGEV* # ORIGINAL: g7250.t1 original gene structure, not modified by PASA NODE_801_length_17582_cov_40.9654 AUGUSTUS gene 54 3526 . + . ID=g7250;Name=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS mRNA 54 3526 . + . ID=g7250.t1;Parent=g7250;Name=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 54 226 . + . ID=g7250.t1.exon1;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 54 226 . + 2 ID=cds.g7250.t1;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 681 884 . + . ID=g7250.t1.exon2;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 681 884 . + 0 ID=cds.g7250.t1;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 1002 1071 . + . ID=g7250.t1.exon3;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 1002 1071 . + 0 ID=cds.g7250.t1;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 1388 1552 . + . ID=g7250.t1.exon4;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 1388 1552 . + 2 ID=cds.g7250.t1;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 1914 3526 . + . ID=g7250.t1.exon5;Parent=g7250.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 1914 3526 . + 2 ID=cds.g7250.t1;Parent=g7250.t1 #PROT g7250.t1 g7250 LTTALLARYYKTHFDSGIKEMSFAMENPREYNLPGNTFLVVDCLHASMTHTFASLTQVVFSGHLRVVFGPQLKITFWEFKAQQHREYIPRELLCANATEDAQTVRLPPSTVNEYGITMKTMRCLEMAEVVGQMGDLMGFSIVKDKGAIDSLRELYNNYSSMHGIDVAGAVGGHMQGPHHMISSLADTLSANLAYGRDNTMDSFGIPDRSLHIPSPAGENFLADQSGKKQKSRGKDSAGMTARAGQRGPALQLEAPPAKRRRTQDGASGVNVSLAHTQAQAQAQAQAQAQAQAQAQAQAQAQAERHRMATLAQQQQQQQQQQQQEQPQQEAGGRAKPKKGGSAAAVVPSRVGEAGAAEGAVRPEQLKRRNSRRGTRSGMTPSDSSPPDMDSPSADIHSAQDAAALGKTNAASLSMHNAVSGAAPTDPAVAAALRAAAEQQFQRRNAYQRRLSIARSQFAPTYGAVGARPDAALPGGAADLTVVSGEMEDDELSVAQQRHRDDEKGPCDVDMALVPDAEVDSVEDDGGVRPRSSEGSGRSDDELRLSSLEVSANDAFGGLHYDDAAQYLNGSAHDGAPNVGDSSSSAGLELASSRGVEQEGGQETAVAVASGAVIAVVGAMESRGLDVHALSGGDEGRVDSADDDGEDGAPGLHASAAVEAPPNRDRPDTTSPTDAMQRLVRDSDGTAGDAGRHGNGEDAAGNNTEASAAEAAVAVVVLGADGGDADAGRLVRPSAVEPEAV* # PASA_UPDATE: g7251.t1, single gene model update, valid-1, status:[pasa:asmbl_9469,status:3], valid-1 NODE_801_length_17582_cov_40.9654 . gene 4393 8268 . - . ID=g7251;Name=g7251.t1 NODE_801_length_17582_cov_40.9654 . mRNA 4393 8268 . - . ID=g7251.t1;Parent=g7251;Name=g7251.t1 NODE_801_length_17582_cov_40.9654 . five_prime_UTR 8135 8268 . - . ID=g7251.t1.utr5p1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 8078 8268 . - . ID=g7251.t1.exon1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 8078 8134 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 7755 7845 . - . ID=g7251.t1.exon2;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 7755 7845 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 7420 7556 . - . ID=g7251.t1.exon3;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 7420 7556 . - 2 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 7140 7284 . - . ID=g7251.t1.exon4;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 7140 7284 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 6666 6910 . - . ID=g7251.t1.exon5;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 6666 6910 . - 2 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 6343 6501 . - . ID=g7251.t1.exon6;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 6343 6501 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 6079 6164 . - . ID=g7251.t1.exon7;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 6079 6164 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 5799 5886 . - . ID=g7251.t1.exon8;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 5799 5886 . - 1 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 5575 5662 . - . ID=g7251.t1.exon9;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 5575 5662 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 4927 5399 . - . ID=g7251.t1.exon10;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 4927 5399 . - 2 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . exon 4393 4735 . - . ID=g7251.t1.exon11;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . CDS 4670 4735 . - 0 ID=cds.g7251.t1;Parent=g7251.t1 NODE_801_length_17582_cov_40.9654 . three_prime_UTR 4393 4669 . - . ID=g7251.t1.utr3p1;Parent=g7251.t1 #PROT g7251.t1 g7251 MAQHIPKSGYNSMLKDGAKHFSGLEEAVYRNIQACKELAVVTRTSFGPNGMNKMVINHLDKLFVTNDAATITRELEIQHPAAKMLVMSSQRQEEDLGDGTNFVLVFAGELLEQAEGLLRMGLSPAEVIEGYEKASKKALELLDELVTYTGKDAREINAIKIALRTAVGSKQYGNEDFLCGLIAEACLNVVPKNVANFNVDNVRVAKILGSGIHDSRVIRGMVFAREGEGFVSQVENAKIAVYSCPLDVAQTETKGTVLLKNAEDLKNFSSGEETILEKQIKEIADTGVKLVVSGGRVGDMVLHFLNRYNLMVVKIQSKFELRRLCKATGATALARMGAPTKEEIGHCDKVYGMEIGETRVTVFEQTGDDSGIATIVIRGSTENIMDDVERAVDDGVNVFKAMAKDGRYLPGAGATEIELARRIAAFGETAPGLEQYAIKRFGAAFETIPRALAENRGVNSTELLSKLYAAHHAGKASIGFDIEGEGTATVDATEAKIFDLLATKHSAIRMATNAAVTVLRVDQIIMARQAGGPKPKTNRDWDED* # ORIGINAL: g7252.t1 original gene structure, not modified by PASA NODE_801_length_17582_cov_40.9654 AUGUSTUS gene 9441 14379 . + . ID=g7252;Name=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS mRNA 9441 14379 . + . ID=g7252.t1;Parent=g7252;Name=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 9441 9851 . + . ID=g7252.t1.exon1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 9441 9851 . + 0 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 10054 10237 . + . ID=g7252.t1.exon2;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 10054 10237 . + 0 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 10402 10464 . + . ID=g7252.t1.exon3;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 10402 10464 . + 2 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 10607 10708 . + . ID=g7252.t1.exon4;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 10607 10708 . + 2 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 11019 11863 . + . ID=g7252.t1.exon5;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 11019 11863 . + 2 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 12226 12317 . + . ID=g7252.t1.exon6;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 12226 12317 . + 0 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 12494 12840 . + . ID=g7252.t1.exon7;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 12494 12840 . + 1 ID=cds.g7252.t1;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 12998 14379 . + . ID=g7252.t1.exon8;Parent=g7252.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 12998 14379 . + 2 ID=cds.g7252.t1;Parent=g7252.t1 #PROT g7252.t1 g7252 MPNMVASEAEVRRESMIFAEDASPSLQPNSPTTAAGALGGEVVQQTPSSVSGTLTIRVVEAKDLIEPEFEGLGGGHPGVYCTAFVDGRVCGRPTGPHAPPPTTSSGERRDDMVLQTKPMGLLQTPYWDEETSVEVADALSLTFTCYCKNDTNLSVKTATGSFDLAAIADKDLDDEDQRRDIWVELHPEGSLHIILTLEPKCVAVPKEHKLRRQSSAGLESSHRAHRFQVTSKRKPGSCDACQQLMWGKILKCGTCRFRCHMRCEKIAPRSCKKSSDVEVQESRYSVLISSAKLRNIAMTAIPTSVSLVLNFDGFVMNTESLRRSADLSFEFDKSFYYNAPADTLSERRLTIRVLSNGKEVIGSVDIDLESLLVGPVHNDFQLLLGTRPAGRVSFNMQMEEVRMMNITVGHIHCKLQSLTPNAYYLKGRYSGTEGDHISFRTAVCADTREPAWATEIVGVLRVSGTLRELLGSTVWLRLYHVMDGGQEEMAGECFLSVDKYYQAESPTVAFNERLTRSGRNTGTIQGTLRLENLPKKAQLAAGVRLDEKTIAPAGSVIIGDRTASLTKKVSKGSLPNEVQELGDLFANLQKLQRKEKVDKKLNVEDILARMHALLRASHKQSMISFLYQDRPAIGFATRLFLELWAYLLEYADAAQYQARVKYYLAIGAVMRRSELDVSSGATDPELAMTYRDQLYRTVGYAASKLNRTSSFDAQRDFAVRVLAQAYFHLPELRQRLIDSLPPISKQVQDDSPVGPSHGLEILDWSALNASLLAQCDAAKLAELPKKYLPEEDAWIQRLAKRGQLYFMFVEAVIRHVHSNVVIKDAFDWRAVPGFTILADGAVCALRVRPLTELPDSLLACLDALCLSGPMFGTLVRVAFRRTSVYNVANVSVTMQMLDRWLRVRAESGGFPTDFDSGFFFRGLTMLLESDHSEIVCNAIVLLYRHYEMFRGRKKQVLFGAIVLERNFQRLFMHYDLHVRRAFHILLVYKILPFNTDADQSAAGGGSTPAAGANGPGSTPTRGAHAQPGGAQSNDLNSSVGRDSPMFSAAAMSRDAQGRRTMTNQTKQQRQAALDKALALSYRGAVQSVRNLAPPNLLVYARKSLSDFDALQGTATKGQAPPPLELEFNTYVAEVADKSENW* # ORIGINAL: g7253.t1 original gene structure, not modified by PASA NODE_801_length_17582_cov_40.9654 AUGUSTUS gene 15127 17397 . - . ID=g7253;Name=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS mRNA 15127 17397 . - . ID=g7253.t1;Parent=g7253;Name=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 17265 17397 . - . ID=g7253.t1.exon1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 17265 17397 . - 2 ID=cds.g7253.t1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 16892 16967 . - . ID=g7253.t1.exon2;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 16892 16967 . - 1 ID=cds.g7253.t1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 16581 16694 . - . ID=g7253.t1.exon3;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 16581 16694 . - 0 ID=cds.g7253.t1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 16066 16404 . - . ID=g7253.t1.exon4;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 16066 16404 . - 0 ID=cds.g7253.t1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 15754 15813 . - . ID=g7253.t1.exon5;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 15754 15813 . - 0 ID=cds.g7253.t1;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS exon 15127 15564 . - . ID=g7253.t1.exon6;Parent=g7253.t1 NODE_801_length_17582_cov_40.9654 AUGUSTUS CDS 15127 15564 . - 0 ID=cds.g7253.t1;Parent=g7253.t1 #PROT g7253.t1 g7253 VFDEADELLKHDFKDSLDQILANAPSKNQRQTVFFSATLTKEVKLLVDEYARKAELIDLIGEGRKTPSKVIHQAISVHNSDKFAVVRAVLAKENPEKAIIFTPTKIEATKLALDLAQWGLKAAPLHGELTQDQRDYFMKQFRSGEINFIVATDVAARGIDVPEVELVLQTKPPEAGQIQSYIHRSGRTGRAGREGKAIILHTPIDSDNLRAVERTVGKLEHIRPPTVVEVVAAYVDRGMKRLAEVDEAIVDMCVEKAEALIAEQGTRGVARALAAASHAEKLDAREFAQPRPREQGDRPGFSGFAGSRGGFGGGYGGGRGSFGGAGRGSYGGSRGGDRGDRGDRGDRGDRFSNDRSGGFRSDRYGGDREARGGYNARTSRPTSFN* # PASA_UPDATE: g1189.t1, single gene model update, valid-1, status:[pasa:asmbl_1728,status:3], valid-1 NODE_1480_length_11039_cov_42.3158 . gene 6331 8093 . + . ID=g1189;Name=g1189.t1 NODE_1480_length_11039_cov_42.3158 . mRNA 6331 8093 . + . ID=g1189.t1;Parent=g1189;Name=g1189.t1 NODE_1480_length_11039_cov_42.3158 . five_prime_UTR 6331 6384 . + . ID=g1189.t1.utr5p1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . exon 6331 6388 . + . ID=g1189.t1.exon1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . CDS 6385 6388 . + 0 ID=cds.g1189.t1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . exon 6812 6971 . + . ID=g1189.t1.exon2;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . CDS 6812 6971 . + 2 ID=cds.g1189.t1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . exon 7269 7453 . + . ID=g1189.t1.exon3;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . CDS 7269 7453 . + 1 ID=cds.g1189.t1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . exon 7879 8093 . + . ID=g1189.t1.exon4;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . CDS 7879 7961 . + 2 ID=cds.g1189.t1;Parent=g1189.t1 NODE_1480_length_11039_cov_42.3158 . three_prime_UTR 7962 8093 . + . ID=g1189.t1.utr3p1;Parent=g1189.t1 #PROT g1189.t1 g1189 MGKPSGLRTARKLRNHRREERWADKSYKKKALGTIHKHQPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRAGHAVGDIPGVRFKVVKVAGVALLSLWKEKKEKPRS* # ORIGINAL: g1188.t1 original gene structure, not modified by PASA NODE_1480_length_11039_cov_42.3158 AUGUSTUS gene 2875 5633 . - . ID=g1188;Name=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS mRNA 2875 5633 . - . ID=g1188.t1;Parent=g1188;Name=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 5307 5633 . - . ID=g1188.t1.exon1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 5307 5633 . - 0 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 4865 5182 . - . ID=g1188.t1.exon2;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 4865 5182 . - 0 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 4406 4693 . - . ID=g1188.t1.exon3;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 4406 4693 . - 0 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 4199 4247 . - . ID=g1188.t1.exon4;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 4199 4247 . - 0 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 3744 3903 . - . ID=g1188.t1.exon5;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 3744 3903 . - 2 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 3419 3542 . - . ID=g1188.t1.exon6;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 3419 3542 . - 1 ID=cds.g1188.t1;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 2875 2964 . - . ID=g1188.t1.exon7;Parent=g1188.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 2875 2964 . - 0 ID=cds.g1188.t1;Parent=g1188.t1 #PROT g1188.t1 g1188 MTADAADEMAAIASIYTDEIISLNSTSIEMLLHLEGGVEGTHCGAPVYPMRIRFQCDGGYPVDAPPRCDADAFWATEEALAKVPDQVRHIWVEGRGECILYQVIEYLIKEHARNETIKAAYERDPAIGRALSQYNKSHAHTQFERGLHVCQICFTEKLGKDFALLSACEAQSEKSCRTVPHENFCAECISAYFCTLITEGNIDALQCPDRKCKAKVTPSDLRDYITFELLEKYESIAISKALDSMPDITWCPRKACRTPVIIDWSDSSSKEDGATLGQCPTCTYTFCAKCQMPYHPSISCEMMRQIEMGKTFLKINPNGHRRRGDHKDKSAAEDALTRFRQYQEAERTTDVIMKTTRLCPSCRVPIEKNGGCDHMHCIRCRTPFLWSGAIVVHSARELAALELAEERRKYKLEMEKMLKSSTHNGLVKTPQAHALKPTRKPGLPDTPSVDD* # ORIGINAL: g1186.t1 original gene structure, not modified by PASA NODE_1480_length_11039_cov_42.3158 AUGUSTUS gene 91 414 . + . ID=g1186;Name=g1186.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS mRNA 91 414 . + . ID=g1186.t1;Parent=g1186;Name=g1186.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 91 414 . + . ID=g1186.t1.exon1;Parent=g1186.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 91 414 . + 0 ID=cds.g1186.t1;Parent=g1186.t1 #PROT g1186.t1 g1186 MALKELAERAKTGKLKPDEFQGGTFSISNLGMFGISRFSAVINPPQTAILAVGGGQRTVVVDESGQPVVATIMTVRLSFDARATSEDGAARWLEVFRAYVESPVRLL* # PASA_UPDATE: g1190.t1, single gene model update, valid-1, status:[pasa:asmbl_1727,status:12],[pasa:asmbl_1730,status:12], valid-1 NODE_1480_length_11039_cov_42.3158 . gene 8261 9600 . - . ID=g1190;Name=g1190.t1 NODE_1480_length_11039_cov_42.3158 . mRNA 8261 9600 . - . ID=g1190.t1;Parent=g1190;Name=g1190.t1 NODE_1480_length_11039_cov_42.3158 . five_prime_UTR 9495 9600 . - . ID=g1190.t1.utr5p1;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . exon 9393 9600 . - . ID=g1190.t1.exon1;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . CDS 9393 9494 . - 0 ID=cds.g1190.t1;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . exon 8998 9129 . - . ID=g1190.t1.exon2;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . CDS 8998 9129 . - 0 ID=cds.g1190.t1;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . exon 8261 8696 . - . ID=g1190.t1.exon3;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . CDS 8559 8696 . - 0 ID=cds.g1190.t1;Parent=g1190.t1 NODE_1480_length_11039_cov_42.3158 . three_prime_UTR 8261 8558 . - . ID=g1190.t1.utr3p1;Parent=g1190.t1 #PROT g1190.t1 g1190 MSSNSSDDEVVVPHDGNRDSIAHSKSTVLEYSHQAPPPCKNFCQVVVNKRGVVYREWQITLRQDDSKGRPSEKTFTHESFVYERKLHDKLLLTFGEAKLKQLVSACEKLIAAKKAESKKSESK* # PASA_UPDATE: g1191.t1, single gene model update, valid-1, status:[pasa:asmbl_1729,status:12], valid-1 NODE_1480_length_11039_cov_42.3158 . gene 9907 10902 . + . ID=g1191;Name=g1191.t1 NODE_1480_length_11039_cov_42.3158 . mRNA 9907 10902 . + . ID=g1191.t1;Parent=g1191;Name=g1191.t1 NODE_1480_length_11039_cov_42.3158 . five_prime_UTR 9907 9908 . + . ID=g1191.t1.utr5p1;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . exon 9907 10031 . + . ID=g1191.t1.exon1;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . CDS 9909 10031 . + 0 ID=cds.g1191.t1;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . exon 10209 10271 . + . ID=g1191.t1.exon2;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . CDS 10209 10271 . + 0 ID=cds.g1191.t1;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . exon 10855 10902 . + . ID=g1191.t1.exon3;Parent=g1191.t1 NODE_1480_length_11039_cov_42.3158 . CDS 10855 10902 . + 0 ID=cds.g1191.t1;Parent=g1191.t1 #PROT g1191.t1 g1191 MGEQFDPCSYVKLGLNAKINANVSELESLVRALCKGSAGQKAISEAVAEFSSHEDRMVSTKQKLHRLETLLQRYHQR* # ORIGINAL: g1187.t1 original gene structure, not modified by PASA NODE_1480_length_11039_cov_42.3158 AUGUSTUS gene 1039 1857 . - . ID=g1187;Name=g1187.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS mRNA 1039 1857 . - . ID=g1187.t1;Parent=g1187;Name=g1187.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS exon 1039 1857 . - . ID=g1187.t1.exon1;Parent=g1187.t1 NODE_1480_length_11039_cov_42.3158 AUGUSTUS CDS 1039 1857 . - 0 ID=cds.g1187.t1;Parent=g1187.t1 #PROT g1187.t1 g1187 MGCTRSGRALQKRYTNILRPDRNKGVWSEDERRRLLEGIVKHGRDWTAVAGHVGTGRTPNHCRRTAIYPLCSFDYASAVRGKRFTPDEDARLRIAVERHGRAHWSKVVKDVPGRGEEHLMERYRRIIPKWMRVSYSPAARASMWALLRGDGDVESKLAAQFKDINAAKGWVALQLGMDDVSQVDWARVNRASGAERSVALDSVEKEIVPRVTAEEWKEGASAVWVPAWRWERPICAGRRAPIAAIRKPPAHRAIRRCQCLGRPLIACTCFHL* # ORIGINAL: g10335.t1 original gene structure, not modified by PASA NODE_269_length_28623_cov_42.0887 AUGUSTUS gene 23061 27801 . - . ID=g10335;Name=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS mRNA 23061 27801 . - . ID=g10335.t1;Parent=g10335;Name=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 27601 27801 . - . ID=g10335.t1.exon1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 27601 27801 . - 0 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 27396 27429 . - . ID=g10335.t1.exon2;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 27396 27429 . - 0 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 27080 27210 . - . ID=g10335.t1.exon3;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 27080 27210 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 26715 26816 . - . ID=g10335.t1.exon4;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 26715 26816 . - 0 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 26426 26558 . - . ID=g10335.t1.exon5;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 26426 26558 . - 0 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 25983 26133 . - . ID=g10335.t1.exon6;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 25983 26133 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 25606 25724 . - . ID=g10335.t1.exon7;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 25606 25724 . - 1 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 25214 25432 . - . ID=g10335.t1.exon8;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 25214 25432 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 24785 25012 . - . ID=g10335.t1.exon9;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 24785 25012 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 24182 24411 . - . ID=g10335.t1.exon10;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 24182 24411 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 23874 23955 . - . ID=g10335.t1.exon11;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 23874 23955 . - 0 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 23648 23690 . - . ID=g10335.t1.exon12;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 23648 23690 . - 2 ID=cds.g10335.t1;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 23061 23382 . - . ID=g10335.t1.exon13;Parent=g10335.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 23061 23382 . - 1 ID=cds.g10335.t1;Parent=g10335.t1 #PROT g10335.t1 g10335 MEPAEEGARTSHSDVIIKEIADDRRITITFDALSYYVPLPQTFKEKWNNKGPAPERQILKELTGAIKPGEVTALMGPSGAGKTTFMDILADRRAIGRTEGIVAFNGKPRPDNFTKLCGYVEQENILLATLTPREHLFFTALLKLPKSMTDEARKAKVDQILVEMDLEACADVVVGDALNIGISLGQAKRLNIGIELITSPPLLFLDEPTSGLDSAMSLDIVKVLHTISRTGVLVACTVHQPSEELFGLFDSLVLLLVGEFVYFGKTSGAVGYFGSLGFHCPDDVNPADYIFSVISGMGDDNEVAMRALQESSAGKNLKNVSADYFVENYKKSTMARDRKQSSTVASSHSSGRNMGNTQLVYTNDIVWNTKALIHRDIARAKRDETFWGKRVIMNIIVALVMMSLYIDSPLDERGVRNRMSLMLLIVAFFTIGANQMIGPLLEARQYFIRERQSASYQVGAYYLATTLFEFPFAALKGLIWAGILYFSCQFEYTAGKFFFFLLILVFISDLGIAMAQFFAAVSPTVEVGSALMTTFPLLFMIFSGFFIIPDLIPYFWIWLYWSSFFNYAIGALMLNEYKGSTRYTRLGNVCYDAPSADACGAASQCSQFTEAVLPWSGSQIMSTVGVGKGPFTDIWSNFGMVVLFWGLMRLGAYYALIKFKHAAK* # PASA_UPDATE: g10331.t1, single gene model update, valid-1, status:[pasa:asmbl_4835,status:3], valid-1 # PASA_UPDATE: g10331.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4833,status:13],[pasa:asmbl_4834,status:12], valid-1 NODE_269_length_28623_cov_42.0887 . gene 2539 5729 . + . ID=g10331;Name=g10331.t1 NODE_269_length_28623_cov_42.0887 . mRNA 2539 5729 . + . ID=g10331.t1;Parent=g10331;Name=g10331.t1 NODE_269_length_28623_cov_42.0887 . five_prime_UTR 2539 2650 . + . ID=g10331.t1.utr5p1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . exon 2539 3381 . + . ID=g10331.t1.exon1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . CDS 2651 3381 . + 0 ID=cds.g10331.t1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . exon 3672 3848 . + . ID=g10331.t1.exon2;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . CDS 3672 3848 . + 1 ID=cds.g10331.t1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . exon 4110 4297 . + . ID=g10331.t1.exon3;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . CDS 4110 4297 . + 1 ID=cds.g10331.t1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . exon 4379 4931 . + . ID=g10331.t1.exon4;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . CDS 4379 4569 . + 2 ID=cds.g10331.t1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . exon 5228 5729 . + . ID=g10331.t1.exon5;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . three_prime_UTR 4570 4931 . + . ID=g10331.t1.utr3p1;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . three_prime_UTR 5228 5729 . + . ID=g10331.t1.utr3p2;Parent=g10331.t1 NODE_269_length_28623_cov_42.0887 . mRNA 2539 5729 . + . ID=g10331.t1.1.5b6be70b;Parent=g10331;Name=g10331.t1 NODE_269_length_28623_cov_42.0887 . five_prime_UTR 2539 2650 . + . ID=g10331.t1.1.5b6be70b.utr5p1;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . exon 2539 3381 . + . ID=g10331.t1.1.5b6be70b.exon1;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . CDS 2651 3381 . + 0 ID=cds.g10331.t1.1.5b6be70b;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . exon 3672 3848 . + . ID=g10331.t1.1.5b6be70b.exon2;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . CDS 3672 3848 . + 1 ID=cds.g10331.t1.1.5b6be70b;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . exon 4110 4297 . + . ID=g10331.t1.1.5b6be70b.exon3;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . CDS 4110 4297 . + 1 ID=cds.g10331.t1.1.5b6be70b;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . exon 4379 5729 . + . ID=g10331.t1.1.5b6be70b.exon4;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . CDS 4379 4569 . + 2 ID=cds.g10331.t1.1.5b6be70b;Parent=g10331.t1.1.5b6be70b NODE_269_length_28623_cov_42.0887 . three_prime_UTR 4570 5729 . + . ID=g10331.t1.1.5b6be70b.utr3p1;Parent=g10331.t1.1.5b6be70b #PROT g10331.t1 g10331 MSSSYYSSQGGADRQSSEKTYSAAPPSSSSAAGAPGAADGYASHSSAADNGSHPHTSARDAPYADGGAGAHGYDGWDGRRGPPDYDYYASRDDYYRGYPPPPAGRDYPPYERDRDRDRYDYYRGPPPGASPPPGHRGRDDYYGSYYGRGPSPPPFAPHYPPIASGYEGRPLAGPQRDDAVSYRPGYSRPPPPAARDDDYSRGGRGFDRDRERVRDRPPRDLDRDRDYRRDTVLRRDDRRPPPGGPRPDRPPRDPRELETATTIFVGNLPYRFREEDVRALFDKHGKIANVTLTMDRSSGHNKGFAFVKFEDRHNALEAFRNTEGMAVEGRRLRLDWDSGVSGDRAPRPPPAHGDSFRGRSLSPAADRSSGAAGASSAGGYASYYTSGASGYGTGTGATDNHRSGWSRRSPDVQATAPASGSDGDARRP* #PROT g10331.t1.1.5b6be70b g10331 MSSSYYSSQGGADRQSSEKTYSAAPPSSSSAAGAPGAADGYASHSSAADNGSHPHTSARDAPYADGGAGAHGYDGWDGRRGPPDYDYYASRDDYYRGYPPPPAGRDYPPYERDRDRDRYDYYRGPPPGASPPPGHRGRDDYYGSYYGRGPSPPPFAPHYPPIASGYEGRPLAGPQRDDAVSYRPGYSRPPPPAARDDDYSRGGRGFDRDRERVRDRPPRDLDRDRDYRRDTVLRRDDRRPPPGGPRPDRPPRDPRELETATTIFVGNLPYRFREEDVRALFDKHGKIANVTLTMDRSSGHNKGFAFVKFEDRHNALEAFRNTEGMAVEGRRLRLDWDSGVSGDRAPRPPPAHGDSFRGRSLSPAADRSSGAAGASSAGGYASYYTSGASGYGTGTGATDNHRSGWSRRSPDVQATAPASGSDGDARRP* # ORIGINAL: g10330.t1 original gene structure, not modified by PASA NODE_269_length_28623_cov_42.0887 AUGUSTUS gene 334 1840 . - . ID=g10330;Name=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS mRNA 334 1840 . - . ID=g10330.t1;Parent=g10330;Name=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 1449 1840 . - . ID=g10330.t1.exon1;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 1449 1840 . - 0 ID=cds.g10330.t1;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 1013 1257 . - . ID=g10330.t1.exon2;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 1013 1257 . - 1 ID=cds.g10330.t1;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 707 813 . - . ID=g10330.t1.exon3;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 707 813 . - 2 ID=cds.g10330.t1;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 334 504 . - . ID=g10330.t1.exon4;Parent=g10330.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 334 504 . - 0 ID=cds.g10330.t1;Parent=g10330.t1 #PROT g10330.t1 g10330 MSSDNAVANRPPPALPVQQLPFPDRPALLRDPKGMAAENARLSLALGLGFGKSLPTGGAVATADGAVGIADRGEAVAGSCGTLEDFAFGDGTVPEFAAVWGTGVGDDGISLLSMPLPLRSGPPTAPSSHPSMSIGKSNDVIAVASLLARARSLMADGRPQAQTPGPPVPVYRWPLQSSDSDFVTEESASARREVDLLTQKSAAALLASAGFDASSGDSLDVFWSVMAAHMLKLSQLLHRLREHDVDEPAASIFVKALREMGSVPTVLRAHTRSIGLSHKRLRMAVHRLKLDKERKSSRPAQGST* # ORIGINAL: g10334.t1 original gene structure, not modified by PASA NODE_269_length_28623_cov_42.0887 AUGUSTUS gene 15738 21101 . - . ID=g10334;Name=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS mRNA 15738 21101 . - . ID=g10334.t1;Parent=g10334;Name=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 20876 21101 . - . ID=g10334.t1.exon1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 20876 21101 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 20277 20416 . - . ID=g10334.t1.exon2;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 20277 20416 . - 2 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 19887 20036 . - . ID=g10334.t1.exon3;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 19887 20036 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 19541 19619 . - . ID=g10334.t1.exon4;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 19541 19619 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 19094 19182 . - . ID=g10334.t1.exon5;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 19094 19182 . - 2 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 18729 18814 . - . ID=g10334.t1.exon6;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 18729 18814 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 18300 18431 . - . ID=g10334.t1.exon7;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 18300 18431 . - 1 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 17968 18037 . - . ID=g10334.t1.exon8;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 17968 18037 . - 1 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 17607 17665 . - . ID=g10334.t1.exon9;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 17607 17665 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 17364 17457 . - . ID=g10334.t1.exon10;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 17364 17457 . - 1 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 17075 17130 . - . ID=g10334.t1.exon11;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 17075 17130 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 16579 16785 . - . ID=g10334.t1.exon12;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 16579 16785 . - 1 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 16228 16306 . - . ID=g10334.t1.exon13;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 16228 16306 . - 1 ID=cds.g10334.t1;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS exon 15738 15893 . - . ID=g10334.t1.exon14;Parent=g10334.t1 NODE_269_length_28623_cov_42.0887 AUGUSTUS CDS 15738 15893 . - 0 ID=cds.g10334.t1;Parent=g10334.t1 #PROT g10334.t1 g10334 MPPRFSLRFVVRIIVLVAVAAFGLHYVRSIGHMPIARLASRGEQGDEEPSADGALPNNMNQGKIVAFSMERWRKLSETSGWNPPIFLYIPMSPVGPQSHWIRETFESHNFRIVTDQSPAGWTVSYTNGYPTHTFPVATERWQHAIGIPGMVICHRGKLCDLMKHAWKEYGQKGFVFSPECFQLPSEKDALQSAMEASPGSHWLLKRADRWGGRGQEIITNISQVLDGQDDKDNYGDRNNTAGKMAYKMGGELAMVQRYIHNPFLFNGGRKHSLRIYVLLNSIYPLRLYIARSGYATFASIPYKAGTEFFDESCMQIDNAPFQHNNCPLYKDPKDQELEAYGNFWSLNGYRKQLVREGMGAVWDKVYAQIKDSVVKTLLLTLPHIDVPNNLKSRRYILFGMDFLVDEAHKAWLLEANCYPGMLDTGTRIKTNMMRKMFSDFIRMNGRFVSEYDRSVYGDEIIQRVSLFCANRAAGCTDREIRVILAHEEESRSSGEFELVFPTARSIRRFWEMLNRPEAHAYAVLRDWLATDGGDSGNAAV* # PASA_UPDATE: g10332.t1, single gene model update, valid-1, status:[pasa:asmbl_4836,status:12], valid-1 NODE_269_length_28623_cov_42.0887 . gene 6133 9828 . + . ID=g10332;Name=g10332.t1 NODE_269_length_28623_cov_42.0887 . mRNA 6133 9828 . + . ID=g10332.t1;Parent=g10332;Name=g10332.t1 NODE_269_length_28623_cov_42.0887 . exon 6133 6241 . + . ID=g10332.t1.exon1;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . CDS 6133 6241 . + 0 ID=cds.g10332.t1;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . exon 6395 8278 . + . ID=g10332.t1.exon2;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . CDS 6395 8278 . + 2 ID=cds.g10332.t1;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . exon 8553 9361 . + . ID=g10332.t1.exon3;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . CDS 8553 9361 . + 2 ID=cds.g10332.t1;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . exon 9523 9828 . + . ID=g10332.t1.exon4;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . CDS 9523 9720 . + 0 ID=cds.g10332.t1;Parent=g10332.t1 NODE_269_length_28623_cov_42.0887 . three_prime_UTR 9721 9828 . + . ID=g10332.t1.utr3p1;Parent=g10332.t1 #PROT g10332.t1 g10332 MQPEVTGLSPKFGSEAGGTSLTIRGDNLGTSATDVIGLSVCGVDCLSTLEWVSPNKLLCKTAPGKGSGAVVVVTRSGGRGACTVKFTYERHEIEIPPSMRQSNVWVDDADEPMGILSQRKAIVADAPAKHAADAEIDPLGIKSGVTRKPLDPTTAPKEVRELCAKGSGDPLAKDFIPALFLLEMHKTTELGDLRSGLDNLRELIETRTNAQNQLLKRNFDSVIACQQTLDDTRDLLRDSERSFKGPITATLENLLQESALFADGIFSSLLERKSRTDSIRSALSVIQRHKFLFNLPRSIETNVERGDYDVAIQDYRRAKSLFADTTVGVFQTVLEEVERIVRRLRERLSRRLELPLPIDELEKIIAYLVDLDAESDPGWMCIERQYAMLSATLESCAGQYSALFSGGDEDVDGNGSHTVAGESGIAIRVPALTRTHTHSSASASSVSAAPVPDLNAAAVPGYDQLRRARGSVVAGQVLRPVQFVRALSNILTSALPSLWKLGQSYFGGKLRKAPSGAVTASDKHVEASPDTMRRSTVLAMQHSGHVPSVSVHGPAAVQQSAAQHEFHLHTRADISKMVGALIETYGTLVRVACDIKDQPPGHIPPADDIDDASHRLPLCAREVADTMDCLSALHLPAAQLDSLADLLGDVNTHTISVVSAVAVRDVRKLRNAEDWQVERCASGGAACTRLVAALERRVLNAMAVISGVLHPHGPPLAGADHADRTADALASLCGVSLLGMLQAFGDALEYLALDYDGSAPLPGGADFVKDDGSGPRRAVAVPTKQRRLLIVLGNVARCKGTLVPHVSARASATISPRAAEMLTPFVSRLDKLDVRIFNSYCDGKSDALRELVEDGVCKAAGDWLRAAAPTRVRPYVKECVLQLVLIDGEVHDSNAPSLARIFRRLAGDLAASIKDAFSALVMSGTKLDTNAFLQATMEVKALQLILQKFESADVIAEFESVLSVIAQARKTQSYANMQAIEGPLDRFKTEMRFQLECLR* # PASA_UPDATE: g10333.t1, single gene model update, valid-1, status:[pasa:asmbl_4837,status:3], valid-1 NODE_269_length_28623_cov_42.0887 . gene 10004 15461 . + . ID=g10333;Name=g10333.t1 NODE_269_length_28623_cov_42.0887 . mRNA 10004 15461 . + . ID=g10333.t1;Parent=g10333;Name=g10333.t1 NODE_269_length_28623_cov_42.0887 . five_prime_UTR 10004 10501 . + . ID=g10333.t1.utr5p1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . five_prime_UTR 10674 10739 . + . ID=g10333.t1.utr5p2;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 10004 10501 . + . ID=g10333.t1.exon1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 10674 10796 . + . ID=g10333.t1.exon2;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 10740 10796 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 10994 11144 . + . ID=g10333.t1.exon3;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 10994 11144 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 11357 11876 . + . ID=g10333.t1.exon4;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 11357 11876 . + 2 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 12028 12100 . + . ID=g10333.t1.exon5;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 12028 12100 . + 1 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 12401 12517 . + . ID=g10333.t1.exon6;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 12401 12517 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 12654 12947 . + . ID=g10333.t1.exon7;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 12654 12947 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 13239 13319 . + . ID=g10333.t1.exon8;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 13239 13319 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 13710 14150 . + . ID=g10333.t1.exon9;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 13710 14150 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 14420 14522 . + . ID=g10333.t1.exon10;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 14420 14522 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 14967 15121 . + . ID=g10333.t1.exon11;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 14967 15121 . + 2 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . exon 15273 15461 . + . ID=g10333.t1.exon12;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . CDS 15273 15374 . + 0 ID=cds.g10333.t1;Parent=g10333.t1 NODE_269_length_28623_cov_42.0887 . three_prime_UTR 15375 15461 . + . ID=g10333.t1.utr3p1;Parent=g10333.t1 #PROT g10333.t1 g10333 MCYEWLSGRLCNLSSSDSDRFEPVTEICLSVDFGIGSGHCYCARVNGTITRHSRQSVQYGTTDGVIFTDATDAATLLQRVWQGLPADTPHTPSSTNSSPSSILNPHAHRIRCMQYEAPFLAFESQNCVHLYDERLGRVCSRLGRSSDRRGGAGGTGNASPTGVATPLSRGSRSPRGGMSAASSRRSSDVGLSGTVDRPSVGLVLLGDVLIAYWDATIYVCSIWSDRSIEVTASYAAQWPITAMTSVGNHIALAFEDAPSAADPAPVQVALVSLADMCLVDLFSLPANASGRFIGVVSGSILYDAGTTYAGVRRNDSTSPISATGASASSRSGDASAALACFIYGRDVVVLRPLSAPEQVLWLVTTGRFEAATHVTQRMRKTRELAEVANEHACALWELHGKYAEAVQVWAEYVLPYATPQYWSAFVDKMEKADKLPLLERYLPFNDRSLLSPDVYFRLLEHHVRRGMYASLYDCVARWPVVYPLDQTIALVAGEIYRVRLSATRRMAALAPDADDAEEGGHVATASFSVSPLCASDSLALSTQVDLGPLWLAVYKLYDFSGRFLEAAQALLAYRPTAESSSTEPPALEFFNARRLWSVLSINRHDFPTSIPADEGDAAATVIHTSKEFAASSDLRTSLLRALSRAEPGRCAALCLGAVREGLITVTDINIILDALPGEGAADSLAVFASAFRAGAQL* # ORIGINAL: g1218.t1 original gene structure, not modified by PASA NODE_2417_length_6355_cov_73.84 AUGUSTUS gene 2045 3178 . - . ID=g1218;Name=g1218.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS mRNA 2045 3178 . - . ID=g1218.t1;Parent=g1218;Name=g1218.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS exon 2045 3178 . - . ID=g1218.t1.exon1;Parent=g1218.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS CDS 2045 3178 . - 0 ID=cds.g1218.t1;Parent=g1218.t1 #PROT g1218.t1 g1218 MDNIITNRFFIRRPLRGNTILAQETKAEAITVTLSTTISNDDLHNVILTLTFNTLVSRNVSFSSARSVDLIESSNELRTLVSSDVTVYLRRGSRVVYPEKKRTVPYGRSRLRLLLELTFSEVILTNDVLVANLTTEIVSDSGSKLLRTDKFPPWTTTLFPDMSFAAIFNPQSCFDPNQHDGSNITCTFTAIFSEKVVNREREDIDGREFYMFVGGNLTIVPFTLIGTGGKYGDNSYEISFSFPKSTFTSVEISVGCITNRIQSLNTGLIVDDKPRRLYVNTQLCGTADLLQTRYYYKEMLSNATKDGRGCERMAVPMACIDGQWSYRVFAPYLFDKCGLMCPSTGGALTRVDCNSTAKCSCDTVAQGTYLPRTAGFQ* # ORIGINAL: g1219.t1 original gene structure, not modified by PASA NODE_2417_length_6355_cov_73.84 AUGUSTUS gene 3954 6322 . - . ID=g1219;Name=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS mRNA 3954 6322 . - . ID=g1219.t1;Parent=g1219;Name=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS exon 6147 6322 . - . ID=g1219.t1.exon1;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS CDS 6147 6322 . - 0 ID=cds.g1219.t1;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS exon 5697 5953 . - . ID=g1219.t1.exon2;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS CDS 5697 5953 . - 1 ID=cds.g1219.t1;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS exon 4631 5506 . - . ID=g1219.t1.exon3;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS CDS 4631 5506 . - 2 ID=cds.g1219.t1;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS exon 3954 4225 . - . ID=g1219.t1.exon4;Parent=g1219.t1 NODE_2417_length_6355_cov_73.84 AUGUSTUS CDS 3954 4225 . - 2 ID=cds.g1219.t1;Parent=g1219.t1 #PROT g1219.t1 g1219 TSRKATVEVDISELKVLKSSGGGELRAMEELKRLDASISMYAVDAQRQKKRSNLEIGDKGYHLIKGDPHISGAKVDPGFRLPVIKRSFSQRRRTGDGTVMIPDFIDIRRVTATDLESSVHMLTEEHEYQRMCDIDVEVSMGYSSLMTKFRFMASASYKTARETIMKSEKIDVIQIARSSNYQVTVTTGDPDLSDEFIEAFNGLPDPECCKAGGQLAVSPCAALCDRYDEMVEKFGMFYVSEVSLGVKVYRRMTITRSFLENMERMETGVKSSVSYSAGGVSLASKLSVSIQQQAKDMKDEKSVSQSWYIFGGDPSKATFDPENFDDVEGLLQHAATGRDNALPMSYKLIPISRILKAEKFPGLALFEEKRAYLIETMESVCVADGAGCSFEDEQSESAVRYGDLVTVSAQTNNQEYSISFGYNSNQVTARPIGNNASQQADCFMFGSTIASKVRPPGNKFTFNEGVSHLVYESNGEASKAFPQNIGWSCNMYTASKFYYTYDMKSFRKVFLNGKYVSFFVIAEISE* # PASA_UPDATE: g7778.t1, single gene model update, valid-1, status:[pasa:asmbl_1094,status:12], valid-1 NODE_1289_length_12380_cov_43.3214 . gene 96 1891 . + . ID=g7778;Name=g7778.t1 NODE_1289_length_12380_cov_43.3214 . mRNA 96 1891 . + . ID=g7778.t1;Parent=g7778;Name=g7778.t1 NODE_1289_length_12380_cov_43.3214 . exon 96 1402 . + . ID=g7778.t1.exon1;Parent=g7778.t1 NODE_1289_length_12380_cov_43.3214 . CDS 96 1402 . + 0 ID=cds.g7778.t1;Parent=g7778.t1;5_prime_partial=true NODE_1289_length_12380_cov_43.3214 . exon 1552 1891 . + . ID=g7778.t1.exon2;Parent=g7778.t1 NODE_1289_length_12380_cov_43.3214 . CDS 1552 1696 . + 1 ID=cds.g7778.t1;Parent=g7778.t1 NODE_1289_length_12380_cov_43.3214 . three_prime_UTR 1697 1891 . + . ID=g7778.t1.utr3p1;Parent=g7778.t1 #PROT g7778.t1 g7778 VAHVRRHTRLPLIYTVRSTAQGGAFDGDEHSMFALLRLGVRLGCEYIDVESTWSVTERESLYAQVHTANALVLSSYHVPKNASFGWTEAAHRMEECYAHGYADIVKFVGWASDCLDAVHLRDAVASFRVAISRPSFPVIAICMGDRGGLTRAANVHLSPVTHPLMPFKAAPGQLSVTELGALRSLSGLAPPRKYYLFGKPVAHSHSPAMHNAGFAALGLGHVYGLLETDDAATASETCSLSDFGGASVTIPLKEAMLSAVHQLSPSASAIGAINTIIKCPAVGSTKLYGDNTDWVGIRDCVAREMRVVARTGHVAWSGLVVGAGGTARAACYALQRLGCSQLFVYNRTVEKARTLADTFGGVVVENFEGFAGSSEVGVVVCTIPADARFTLPETFYENSFIDWLVVVDAAYKPRETALLAQARGMATLHSHVDGVRHPTHRHIATVEGADMLIAQGLAQFESWSGLPAPARAMEAAVRARLEG* # ORIGINAL: g7779.t1 original gene structure, not modified by PASA NODE_1289_length_12380_cov_43.3214 AUGUSTUS gene 3564 12380 . + . ID=g7779;Name=g7779.t1 NODE_1289_length_12380_cov_43.3214 AUGUSTUS mRNA 3564 12380 . + . ID=g7779.t1;Parent=g7779;Name=g7779.t1 NODE_1289_length_12380_cov_43.3214 AUGUSTUS exon 3564 12380 . + . ID=g7779.t1.exon1;Parent=g7779.t1 NODE_1289_length_12380_cov_43.3214 AUGUSTUS CDS 3564 12380 . + 0 ID=cds.g7779.t1;Parent=g7779.t1 #PROT g7779.t1 g7779 MASRSLFGRATFCLFFVLVLGTPMHTDAQEYYEDDAQYVAAANDDAEWAFNDNDNVGAFDLERHLRAVTQTQVPTVSSTSFSASTVEAEPSSSESASPTDEAQTTSEAAESSTPLPPSTTFDAEPTSTAPAPSATKSKPPRPSSTSSANVRCFKSGDILSSSEAADFVKACTTYNIAPYFSSDTTVPGAILEDVPDILNDGIYVAAMVASTLADIDITYTLDDSTVVGPSELYTMLNLALIRIAPDFSTSETIGINAVNATSEDIIRAAVVKGVSTTATAASIKKAVVWALVHLPDIAVSTLPPATSGTLQTTNGTVDSYRAVVANELLAPWFRIRLTPYVNFYGDAEFQVRAHDRHPVRRVYKGDSRYSTNPGKFSWPVISVNDRPVVNSTLFNPASDRVLLPAIPFALSDGITPLSVADMVTFGTDVDSDTLGIAVILVVDGTGSWEYQKVSGGAWTVMSSLLVSSRSGVLLPPTASIRFSPLSTAFGNATLIYRLWDQSAGTAFGTYDVAVKVAPSDATNRRDITVLARRKGCDGVTDSRATLDACGSCKGDGSTCAGCDGVAGSNKVIDQCGKCGGNGESCLGCDKKPNSTLVFDSCNQCGRNNVDKDCNGDCFGTAFIDSCGMCVSGRTGRVANAAKDCNDVCNGTAVRDTCGDCVLGTTGNTFNYRRDCNNKCGGTAAKDRCGVCTSVTDESKKSYIDCAGVCRGSAKLDDCGKCVDGVNVLTANADKDACGVCFGNGTSCAGCDLVPNSGKIVDNCDTCGGDNTGCVAVTQIIPATVPSVNAYVVTVLGAGFTNPGSPVPAALCKILKSDNSDFGVSTAGVFSGIGEVKCTLPDKMPAALGYKIKVLVSGSTYTTSTALFNVYDTASVLSVNPIIGLKTANTAITVTADSVLNVPTIKCVIRSFSASQVATVPANAVIVPATYASPTTASCTVPKVDKSRKVRVSLTYNDVDLVSSNADYTYLAPSATIDSARFDDSGAFVLVTFSSAIARTGGSSSSDCASVFDTATIALFGDSPKCVTTAGSSVQITFFSGWTLAIGDTLTLASSAVSSAGERFPIYSSGSTTVLGPLEPSAPTITVNMPTLLGVCDDLEVRFSIASKTTTRGMTLKWVVLANDGSSTTAIESALATTAASTKFKATVSASLLSAGVEYTVLLRVTTYFNGVGTGQGTTTKSALPIPTTTIDGTTTQSIYRKNHNEFSVSAGIPSCINSTGVKIEYQWSVLSDFSVALGNSVKRNILHVDPFTFEADRSYTLGVVATLTGISETSAITSSSSVVVNVLSTPLTVSIIGGSEKVQSVAKDLRISADCNDPDNAGACATRASFSWRCSRLSETLEVLPCITSSGNELVSNENARDLTIPANSMTAGATYIFQIEAAIGSRSATTSVNIVVTDVDTPKIRFTRQPSDKVANNRKLRLGVSVVSTSAYTIAWTSEDADDSATLDLTTAAVVCNTNGQLNGTSLCISEYSLEAGAKYTFRATATNAEGSSYVQVPVFVASAPSGGRLEATPASGNATHTTFVLSSIGWIGDTDLRYTLSYISPSSGVELLLTDRRANGDSPVKLPAGVAPDYKVTVWVTVSDNFGTATRKSTEVTVYPAAVVSESSTAFKTFADDFLSTVEKLLDAGQISNYITSIDSLLDAIQERSDIACEEHIVNIIKQAIGQVTTLLDLAPFTDENIQRLIVVLRKMLLNFEECLDGDSISAIHKGIDTAVTFAITGLEGASGYISESVSALALDATARMTYNNGTNGTNVLDTLRSIGRAFSGSRKSDEGSTTVSSDDGNFNLGTETIRYDGDDSADVSFTGTCDDYGSGTIECTGATFPTDALDELRSQEGYDGCDSDEEDCGLHVSSVYLDVKTNVFGTLGINKFFRTTGIAEFTIINGESREYIEVSGLSNPVEILVVRRGADTTGKIRQTLQCFYFNTTTQLWTKETSLKSTAVSDQIASCSTHHFTLFGVAETNDTSYLSPPAAKYSSFTPAIDRIDEGGAFTARVAATYGAVNVSQECCKIVWQVNNGTNPNNWISIENSVFASLITITPNNGISTALSTSTFTVKEVYSSFSSYNFRAVVTDELDLKTALAPFKLNPASDRLAMLQASQANILASKSVKEYWTAPDKDWPSFQRTMLRAASDVSAERRYLAVVRNIGEQTIIPSTTTVAGPDSALTLIADYVTVSFDTRPIDEEPFMTDFTTAISDAMEAAFPDGEYATHIVSDFPIVGVGIDIIFYVRDFTTGLAVPQSRVASVVAGSDADCGMFVAYPTTLGAYCNIKIVQNTFMTLLSPENHYLVAAGDSAPFELGVERANAKPDRFHWYAERIVGNNSIVYVEKAPFSNADRFFLRNDVGGYLVVKYDADSNPVFSFASTNATATVFASSTQLTYFLTDRVKGATGANANAWTSNRCSDYRPDWENTESQNIIDCVYAENNPTYRRLEMDLGGNFGVLNVAFYLDTFPFPVQGEFDVSDPTRPFNASQSSYTRLEVWARSEDSSTWYDFTDGASSATLTCGANAATREGRCSVSYDVMRLARNRYRLPGNWGFRYIRIVLGEMSVFTTSLYSKDRYYSVEEIEVQGNCICNGHSKSCFISNGGCYDLLDATSGTPSPVLNCQHNTMDKHCTSCLPTHYINPGNDIPTNAYNCDLSNSTALRTCDGPLLADITPPEIEARKFQYLGRTSTIASNAVGMFSYFFGNGGPCLACQCYGHSKYEQGDLSTRECAETTGECNCLSDPRNVTGFHCEKCVPGFCRACNATSAANVTAQTVCRTETCNVCACNQHSLTKTGSGLDLCDADGCGCTCDPSHNVTGDSCEFCKKGYHSATGDAVNGEKCYGCECNGHKSAQDNECSKLGGDCEKAYDGTTQLCGDNTMGDHCQYCLPGYYRPFQDDGTTILLTDGCIACECNGHGDAKQWTGSGTSTAAICDPNGGVCNCKAADNVEGD # PASA_UPDATE: g9523.t1, single gene model update, valid-1, status:[pasa:asmbl_3320,status:3], valid-1 # PASA_UPDATE: g9523.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3321,status:12], valid-1 NODE_2034_length_8000_cov_42.8607 . gene 6491 7924 . - . ID=g9523;Name=g9523.t1 NODE_2034_length_8000_cov_42.8607 . mRNA 6491 7924 . - . ID=g9523.t1;Parent=g9523;Name=g9523.t1 NODE_2034_length_8000_cov_42.8607 . five_prime_UTR 7726 7924 . - . ID=g9523.t1.utr5p1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . exon 7606 7924 . - . ID=g9523.t1.exon1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . CDS 7606 7725 . - 0 ID=cds.g9523.t1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . exon 7201 7329 . - . ID=g9523.t1.exon2;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . CDS 7201 7329 . - 0 ID=cds.g9523.t1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . exon 6738 6866 . - . ID=g9523.t1.exon3;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . CDS 6738 6866 . - 0 ID=cds.g9523.t1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . exon 6491 6576 . - . ID=g9523.t1.exon4;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . CDS 6562 6576 . - 0 ID=cds.g9523.t1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . three_prime_UTR 6491 6561 . - . ID=g9523.t1.utr3p1;Parent=g9523.t1 NODE_2034_length_8000_cov_42.8607 . mRNA 6491 7924 . - . ID=g9523.t1.1.5b6be70b;Parent=g9523;Name=g9523.t1 NODE_2034_length_8000_cov_42.8607 . five_prime_UTR 7856 7924 . - . ID=g9523.t1.1.5b6be70b.utr5p1;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . five_prime_UTR 7648 7707 . - . ID=g9523.t1.1.5b6be70b.utr5p2;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . exon 7856 7924 . - . ID=g9523.t1.1.5b6be70b.exon1;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . exon 7606 7707 . - . ID=g9523.t1.1.5b6be70b.exon2;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . CDS 7606 7647 . - 0 ID=cds.g9523.t1.1.5b6be70b;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . exon 7201 7329 . - . ID=g9523.t1.1.5b6be70b.exon3;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . CDS 7201 7329 . - 0 ID=cds.g9523.t1.1.5b6be70b;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . exon 6738 6866 . - . ID=g9523.t1.1.5b6be70b.exon4;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . CDS 6738 6866 . - 0 ID=cds.g9523.t1.1.5b6be70b;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . exon 6491 6576 . - . ID=g9523.t1.1.5b6be70b.exon5;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . CDS 6562 6576 . - 0 ID=cds.g9523.t1.1.5b6be70b;Parent=g9523.t1.1.5b6be70b NODE_2034_length_8000_cov_42.8607 . three_prime_UTR 6491 6561 . - . ID=g9523.t1.1.5b6be70b.utr3p1;Parent=g9523.t1.1.5b6be70b #PROT g9523.t1 g9523 MHLHLQVHTDGEASLLSHIPTLHDRCMRLSLLFGRIETVEALVAGVRQHVDLYEEKVSLAERNYKANALKRVLGSIPIAGSVVRQLSQTSTARALSGATDSGDSVGALPLFVAADYFRHPSAHYDLADDD* #PROT g9523.t1.1.5b6be70b g9523 MRLSLLFGRIETVEALVAGVRQHVDLYEEKVSLAERNYKANALKRVLGSIPIAGSVVRQLSQTSTARALSGATDSGDSVGALPLFVAADYFRHPSAHYDLADDD* # PASA_UPDATE: g9522.t1, single gene model update, valid-1, status:[pasa:asmbl_3322,status:12], valid-1 NODE_2034_length_8000_cov_42.8607 . gene 601 6483 . + . ID=g9522;Name=g9522.t1 NODE_2034_length_8000_cov_42.8607 . mRNA 601 6483 . + . ID=g9522.t1;Parent=g9522;Name=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 601 2176 . + . ID=g9522.t1.exon1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 601 2176 . + 0 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 2364 2632 . + . ID=g9522.t1.exon2;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 2364 2632 . + 2 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 2727 2884 . + . ID=g9522.t1.exon3;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 2727 2884 . + 0 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 3153 3336 . + . ID=g9522.t1.exon4;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 3153 3336 . + 1 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 3481 3609 . + . ID=g9522.t1.exon5;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 3481 3609 . + 0 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 3725 4031 . + . ID=g9522.t1.exon6;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 3725 4031 . + 0 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 4151 4504 . + . ID=g9522.t1.exon7;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 4151 4504 . + 2 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 4754 4988 . + . ID=g9522.t1.exon8;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 4754 4988 . + 2 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 5112 5500 . + . ID=g9522.t1.exon9;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 5112 5500 . + 1 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 5747 5954 . + . ID=g9522.t1.exon10;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 5747 5954 . + 2 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . exon 6110 6483 . + . ID=g9522.t1.exon11;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . CDS 6110 6371 . + 1 ID=cds.g9522.t1;Parent=g9522.t1 NODE_2034_length_8000_cov_42.8607 . three_prime_UTR 6372 6483 . + . ID=g9522.t1.utr3p1;Parent=g9522.t1 #PROT g9522.t1 g9522 MHAIGGFVHGGRWAWKLHDGSITVYCGTTGRLLGAIRPVDEKILGNSRADSPGVTAATGVTLDGGKTPALAIAVQCGSAPSGRIVLAGLPSCAHIRTVSLPHMPRCVEWVGSWHGRGMSLAAAVAVGAEGGRLILLDVERPDAHRDASGVAHVAWPLDRGSDTTRPHAYVDLTSDSHTPFRGTTSQFLFKAPAGAVVKTVESDCAAVTSLSYFAPGRLLAAGYAFGGLHLWALEEGDARIAASQPATANEAAEDDDSWEAARLPVEGLAWQVPEHDRAFCFLWATRQGTGLHLALHQLQFECDDGAAEDDAVGRPASYGSLLHCVRRLVHAIPKASLLTCLPVAPDCETLATTLCVFAWTLPDTAALVLAIFDLSNYYSDQQPSSVRARCPFFAEHSVHMSDGVLSVFVGNGAARVFSSRVAGVADDTAPAEPLHWGVAVSMRPRLLLACGGVASAPVVCAQEEALARLAQEGVDALSQPLSVVAKLQRVGLIASAAGEDDRSANPLNLVFDALLENNLSTMIRHYTAACPDALLRPTLAWWTRAFASLHRHMRALYRPHALAEPSAAYRARMGVLLGRLGALYGVLEAMLARDTTPDGRTTLEGKRRDLLVVSQHAEMMAWYVEFLRHSSPLSNLSLNGLRAKHALLRERRTAARAATSVTVTGMALSANAGDTGCTGAELFFDILVQSVGPEVVNVLSRDSHDPVFPAAFDMFLSGDSADVHRKRQIVRYILQDLGVEQRVLEGYSRTFMVSPEEEDVLGGYWMLDNGDKAAAAAGVCNAWASAKGVVPSSHILRTLFDLGAHEEALLVLRAVRPALSSPGDAVVALRVLLANGLLAEAFDLQRQCAARTAGDGDRDYAGEMLYFLCDGAKKLGEMGVFLGYPFNDAECRRVESYLGVSLQAATSSHDRRAAEEFGGYLVAFLLQRSRYAEAARLGSALGAQNSLRDIADSCALVVPLSQRDCAPLPNAQPARHVPADAAQPTARRQIADVSRVPLSACLLRQADSSSSGPRTFTRAAMMAAIMDGSGTVSQQTASAATPFKAPRTHAHAQPPRPFDAPPSTPLRGHVRDVVLVVPTPVMAPHYHGMDASPSPLFATPEGDHAASPLVTPLLDRSSSRRQPQQLSSLRADGLSLRQSSPLSSLFGFDLGGSPLSRLQSAAPPTPSIASRAAPSSILKKRALQVDEDLQQAQDYARQRTAPDPTPTPSAAPTAARLKTPPRRAARSRAPVQEPPAPLSSAKKSVKFASLGDNDADEPPRATLDTQAQQRFSEAPSVATHALPSYGVQTDFASTPQSGVDSIVTRLRSAQRRSGGTAAHGDAQSPLSFGPATPGGERSTPRSARKAKVANAARKAK* # ORIGINAL: g1496.t1 original gene structure, not modified by PASA NODE_687_length_19040_cov_39.1337 AUGUSTUS gene 1627 6966 . + . ID=g1496;Name=g1496.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS mRNA 1627 6966 . + . ID=g1496.t1;Parent=g1496;Name=g1496.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 1627 6966 . + . ID=g1496.t1.exon1;Parent=g1496.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 1627 6966 . + 0 ID=cds.g1496.t1;Parent=g1496.t1 #PROT g1496.t1 g1496 MTSQKHNSGTSTSASPGRIHAMQASPRAQPSSASPGPRRMMQYFPVNMPPVLHDMVYDPVSLSWHKVDAQEEEMLDVSDVSAPQSDFGGDSDDEDRINGGGDHGVDQEHVEEDYSANDEDEEEPIDDESDTSGNESTGSVRRIDLSARGPFPQPAEGNLDEPLHLSHLAAGNASAVTQATEAPPFSIGRLLGRDTQQHGASSSTSVASPRTEARPRDGHVHDASSSDSDSRGRGARTAAAPPSSNATAQQNQQGGRFDDMFGGELSDSWGTADKDSAHATPEKAQPQGTSTPGGSSHAVARSASPTRSVEALSSPKDGTLVVRDAPPRSHTRLTRHIIGNRPFVDMLSPNCRLDDLFKNAAPATDHATHATHPVARGNGSVSSEADSVRSRPGPHDGANAPSVSAFSHHNRSVNRSDNRSDNRSDAGSSRIDSSTWGEDALNSVTIAGALQLMASLGGHDVSPSQGGTGDDPSIATSRTTASQQKRPSNDFSDAPSSKVEGPQSASAHTASPAASVAAQASRRAAEASRWLDVRTIFAPTELATVTRLALPRRGYVGVTGLAQLTRLGEVDLSGNSIVDAGQALPDAPASITTLSLASNILRSLGTMPRRLSMLRSLDLSGNGLSSLSGIANCELLVHLNVASNELANVHDLGRLTRLRTLDVSGNSISSLVDIPPIGTLQRLGARGNMIASLAGLSRFHSLTWLDLTGNSLDSVDGVGFADFSDSFSMDGSAVYASSGAGAGVLPPITTLILASNRIRSLEGLEHLPSLSVLDVSDNVLRTFAGWSHCIPHARVVLASGNRITDAEPLVHNTIEVLDVSHNELRSLLAVSGCRLLRQLVASDNRIVYDSALVRNSRGTGSAADGHYNGGDVGLFAELRTLDLAGNYLVDIGFCSDPRFSLARLQQLNVPRNQIASASRIASDIRRLRRIERVDARGNPAIHDAYPDFISRGDNASIVSGAGVTAHPAGGRASSVHPSVAPTTAKSRVDAGMGRLFDGAEFADIEMYDAANPVGAKARLRHRMRVLGWASDTLDVLDGVRVTHGERDRAVSRARLAASAGVAASTESLVAQHPQQQQQQQQLQQLQQQQQQQQSQRHLQQPHQAQQLAHRSPARQLHNKDASAQRSVSVVVPSRSPSSSPKGKRRAFPDAPAQVAWTHIDAADIEPSLSLMDVKSMRIDVAHHRDNPKFKAPASPSRAQPHPRRSPSKDAGQSRPANRAFGRDGTALEHDVASADGRHAWERVGAGDGGPPDAHAMHSGPMDARELGHERIGSDYSQSVEEFLGDVRGDTAIGVMRRLHSEHFANRPHEQRRSSSWEVPKDAYTEASAHQSRANNGHAEWGDAGHVEASRWESRDSAPVVSGRIMGEARSRKMWDRAAVDDVVNGHGVEAANGEVHQEGSKDEEVHDRSFWIPVDGVSMRGGSPDVAVDITARTATAVGSGNSQRRPFAGVIPFAPSTPAERRRLYEERVTKLRRNNALKTGARTRHAKALTETARDRFHQDLVVEGLTAPRTRTRLSEDVGAHENGISEMLDWDDGARVARGLRCDVNMPVSHDRPADELVVRGKPAPRTHVHTDVDLMGGREEDGFDSRPRGDDDEHYSATARCHVRGGHMQESARAVPKPASWGVRAAAEKRAAAGPATATATATATARAVKPSTAHPPTRAVPFDVVTAEASSRRPQSYAPEEFMGHSTRGSRDAVDSSHGYVSARIEAATPGGAGRTVSRSRTAAAKGPADSGVYLDYRSDYIAILDELDGRIRGGRNRNDTDDQWETLAPSVR* # ORIGINAL: g1497.t1 original gene structure, not modified by PASA NODE_687_length_19040_cov_39.1337 AUGUSTUS gene 7869 12761 . - . ID=g1497;Name=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS mRNA 7869 12761 . - . ID=g1497.t1;Parent=g1497;Name=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 12656 12761 . - . ID=g1497.t1.exon1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 12656 12761 . - 0 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 11594 11927 . - . ID=g1497.t1.exon2;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 11594 11927 . - 2 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 11206 11464 . - . ID=g1497.t1.exon3;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 11206 11464 . - 1 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 9479 10999 . - . ID=g1497.t1.exon4;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 9479 10999 . - 0 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 9087 9217 . - . ID=g1497.t1.exon5;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 9087 9217 . - 0 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 8651 8776 . - . ID=g1497.t1.exon6;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 8651 8776 . - 1 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 8261 8429 . - . ID=g1497.t1.exon7;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 8261 8429 . - 1 ID=cds.g1497.t1;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS exon 7869 8015 . - . ID=g1497.t1.exon8;Parent=g1497.t1 NODE_687_length_19040_cov_39.1337 AUGUSTUS CDS 7869 8015 . - 0 ID=cds.g1497.t1;Parent=g1497.t1 #PROT g1497.t1 g1497 MPQAFRIILEGRLEKVETRAMFVFARLDINLTKAVDAAATNVMEAGDAPDSAMDAPSAMEADGIVTSSHSADADSGVADSGSGIEVLKDSSAAIQPPVEQSSALIANQQHQQQSNVGEQFHPHAHALLPRPPMGGPPRMPPPGFRPGAPYPPRGALPPPPPMMMMGGMRPPGPFPGGPPPPGAFFGPPGHRPPMPPPPGMPGMGMPPPGMPGMGMPPPPGMWGPPRPPMHMPPGMRPPPAHMPPPMHMPPPLPPGWQAFTTPDGATYYHNASLGQTTWDRPAPPPHVAPPPVRPEWTEHVTGDGKSYFHNTRTGETVWTLPPGAVAEKAVENNLPQTEQQQSQSASASASGASAYSRKPVESVQLGETPWSRVRTNDGSTFFYNRDTKQSVWDMPPEVADIVARVDAESTEARKRKSDDGPVDSHDINEDGEAPSDDVGGAYIPKRMRMQDGTSAGTPSVNINAGPWEAEVAEDVEAEREREKLALDDRMATFFAMLTERGVSAFSSWDKEQAKVVFDGRFSLLNPKEKKGAYDRWAKTRAEEERQERARKTKAIKDAFRALLEEAKPTLATTFAEFAASKHARDDRFKGVEKVKEREALYNEYMHQERERRKEEIAAAREELIGAMQRRDIDISGGWKKAERTIREHRTYTALKKLGGNPEQAYTEYVKRVEDERRAKVDPEEAKRQRERAAIKERERQLREGRKENQRTLDREREQYRHDDAVSQFKSFLADSVRDPSTVWADVYSTLRDDPRWDVGGSALGRSEKESLFDDHVRAMTDKRRQLFHRLLDDTAAVTLTSKWSDLKDALEADPRCTRFSSNSEDREREFNSYLRERSRRAFSDFRLLLQETKQITHETKGVLDRGGPAAEKALSQIKQVLKKDKRYLDLDRDYASQRDDMIMEHIEELQRSGPPPPPTSNLYEKERRNK* # PASA_UPDATE: g1498.t1, single gene model update, valid-1, status:[pasa:asmbl_8875,status:12], valid-1 NODE_687_length_19040_cov_39.1337 . gene 13334 18768 . + . ID=g1498;Name=g1498.t1 NODE_687_length_19040_cov_39.1337 . mRNA 13334 18768 . + . ID=g1498.t1;Parent=g1498;Name=g1498.t1 NODE_687_length_19040_cov_39.1337 . five_prime_UTR 13334 13639 . + . ID=g1498.t1.utr5p1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . five_prime_UTR 13787 13951 . + . ID=g1498.t1.utr5p2;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . five_prime_UTR 14215 14247 . + . ID=g1498.t1.utr5p3;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 13334 13639 . + . ID=g1498.t1.exon1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 13787 13951 . + . ID=g1498.t1.exon2;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 14215 14274 . + . ID=g1498.t1.exon3;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 14248 14274 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 14559 14726 . + . ID=g1498.t1.exon4;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 14559 14726 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 14923 15056 . + . ID=g1498.t1.exon5;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 14923 15056 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 15323 15365 . + . ID=g1498.t1.exon6;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 15323 15365 . + 1 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 15510 15712 . + . ID=g1498.t1.exon7;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 15510 15712 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 15912 16023 . + . ID=g1498.t1.exon8;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 15912 16023 . + 1 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 16350 16494 . + . ID=g1498.t1.exon9;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 16350 16494 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 16631 16821 . + . ID=g1498.t1.exon10;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 16631 16821 . + 2 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 17153 17277 . + . ID=g1498.t1.exon11;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 17153 17277 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 17485 17810 . + . ID=g1498.t1.exon12;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 17485 17810 . + 1 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 17970 18118 . + . ID=g1498.t1.exon13;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 17970 18118 . + 2 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 18321 18428 . + . ID=g1498.t1.exon14;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 18321 18428 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . exon 18616 18768 . + . ID=g1498.t1.exon15;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . CDS 18616 18759 . + 0 ID=cds.g1498.t1;Parent=g1498.t1 NODE_687_length_19040_cov_39.1337 . three_prime_UTR 18760 18768 . + . ID=g1498.t1.utr3p1;Parent=g1498.t1 #PROT g1498.t1 g1498 MGVNATDRVETLRVGSGLRGARSRDGDIILTYVGDLQSEKGPPGILDKYLMMPFTAGMGNVSQAAGGKNDWMLIPKQNFGLDGKTCDRIGISYSGFKRGQAAACSDLPGSCLKNQPKDFYEMSMAARSRGLITGNYFLDAYGHPEGLVNTNSPLLGGSSRSDAGLAFRPDTIENSIITLELDAKDFAFIVQRSSGRIVSVSAADFNSASKDGAINAIVQNTGTIDSQFYVSVPACAPDSIILTSANAQVASIMPYTTNRFVFQIATTTTFGSNYSCQVVLYDSRFAVVDNATVTFLANSTRMNRGPQDFSEQPDDTDHTDSGSGGLGGLGGFFDLINSAFKNVWGVFIIIIILIVGVAVIRRFCGCCSSCCGQSVGKDGKRRSLVQEIVFVGTLPFLFLIFVIKKIILCSMDIRHAADMHRKELSASESTANLNDMSQSPSALRDARESRDGGKQSLFARLFGNSAGNSNQSSANTVELQALRVEARDGARVSVAKKVPPRPPAPHYGVLGENLLDVAASGGQIFFNIAGVNSDKVKQQMADPGASFSLVGRLRLVAPAEGSTIPNYLFDIGKFNKQMSAVVDGEYVRLDVPRQLDSHAFSQVLSRELAARYLTKRPKYFCVNW* # PASA_UPDATE: g1495.t1, single gene model update, valid-1, status:[pasa:asmbl_8874,status:12], valid-1 NODE_687_length_19040_cov_39.1337 . gene 317 1103 . - . ID=g1495;Name=g1495.t1 NODE_687_length_19040_cov_39.1337 . mRNA 317 1103 . - . ID=g1495.t1;Parent=g1495;Name=g1495.t1 NODE_687_length_19040_cov_39.1337 . five_prime_UTR 894 1103 . - . ID=g1495.t1.utr5p1;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . exon 847 1103 . - . ID=g1495.t1.exon1;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . CDS 847 893 . - 0 ID=cds.g1495.t1;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . exon 645 703 . - . ID=g1495.t1.exon2;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . CDS 645 703 . - 1 ID=cds.g1495.t1;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . exon 317 432 . - . ID=g1495.t1.exon3;Parent=g1495.t1 NODE_687_length_19040_cov_39.1337 . CDS 317 432 . - 2 ID=cds.g1495.t1;Parent=g1495.t1 #PROT g1495.t1 g1495 MAKKSHRSEPVDYSESDEGSHSESDDQEDAEDYRKGGYHRVHIGDVYHNGRYRIVRKLGWGHFSTVWLATDQV* # PASA_UPDATE: g14313.t1, single gene model update, valid-1, status:[pasa:asmbl_9650,status:12], valid-1 NODE_844_length_16885_cov_41.3473 . gene 23 506 . - . ID=g14313;Name=g14313.t1 NODE_844_length_16885_cov_41.3473 . mRNA 23 506 . - . ID=g14313.t1;Parent=g14313;Name=g14313.t1 NODE_844_length_16885_cov_41.3473 . five_prime_UTR 355 506 . - . ID=g14313.t1.utr5p1;Parent=g14313.t1 NODE_844_length_16885_cov_41.3473 . exon 277 506 . - . ID=g14313.t1.exon1;Parent=g14313.t1 NODE_844_length_16885_cov_41.3473 . CDS 277 354 . - 0 ID=cds.g14313.t1;Parent=g14313.t1 NODE_844_length_16885_cov_41.3473 . exon 23 158 . - . ID=g14313.t1.exon2;Parent=g14313.t1 NODE_844_length_16885_cov_41.3473 . CDS 23 158 . - 0 ID=cds.g14313.t1;Parent=g14313.t1;3_prime_partial=true #PROT g14313.t1 g14313 MGTGASKQQQPTSTVEVLETMLRDKEGVTEVMTSCDPVVRLGHGSIHKKKGVEGEYFYYPNRLPNDVVTST # PASA_UPDATE: g14315.t1, single gene model update, valid-1, status:[pasa:asmbl_9648,status:12], valid-1 NODE_844_length_16885_cov_41.3473 . gene 7108 9314 . - . ID=g14315;Name=g14315.t1 NODE_844_length_16885_cov_41.3473 . mRNA 7108 9314 . - . ID=g14315.t1;Parent=g14315;Name=g14315.t1 NODE_844_length_16885_cov_41.3473 . exon 9144 9314 . - . ID=g14315.t1.exon1;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . CDS 9144 9314 . - 0 ID=cds.g14315.t1;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . exon 8695 9015 . - . ID=g14315.t1.exon2;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . CDS 8695 9015 . - 0 ID=cds.g14315.t1;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . exon 7108 8570 . - . ID=g14315.t1.exon3;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . CDS 7365 8570 . - 0 ID=cds.g14315.t1;Parent=g14315.t1 NODE_844_length_16885_cov_41.3473 . three_prime_UTR 7108 7364 . - . ID=g14315.t1.utr3p1;Parent=g14315.t1 #PROT g14315.t1 g14315 MRPPRDPVPGLLAALGLEPEDPLGQIGLSFMFHFFVLSSYYIVQPVRDELSTTDGIESFPWLFNASLVIMFVVNWLMAKPLTLKSVDYLVPAVFRGFVGCLLFFYAALTHLGPVWPLPQLFFLWSGVYNLLSISLFWMAMAANFRFRTAARSFGVIGAGGTLGQVVGSAITSGLVRTFGSIQLLIASAVLLECAVRCCESLDIAKHPGLNLAQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQSTLSSSGSGVPPMPNHLQHGLSRGPFSGAMAMLRTPILRHICAHVFLFTCTGSLLYFRKQELVLRLIPSGVRRTTFRADLNGSIGFVSFVIQLVGTGRIVPTIGAFASLSVVPFVTAFGFVALALWPTVPVLSAVMLMRKVAGFALDKAARETLFTMLGPEERTLAKTLIDTFVYRCGDAFAASAFGVALALDRYDVHLEDDSGTGGHKGVKLGAMLLSLLSLIATVLWVANSFWLGRLYGSSRARMISESVSVSSSQQVGSNAQLSSSSGSGTSLLTVTSQGLSMSGHLLHDKGMHSPSSSGNDMSMRAGLYAEGRARAPTS* # PASA_UPDATE: g14316.t1, single gene model update, valid-1, status:[pasa:asmbl_9647,status:3], valid-1 NODE_844_length_16885_cov_41.3473 . gene 9928 14466 . + . ID=g14316;Name=g14316.t1 NODE_844_length_16885_cov_41.3473 . mRNA 9928 14466 . + . ID=g14316.t1;Parent=g14316;Name=g14316.t1 NODE_844_length_16885_cov_41.3473 . five_prime_UTR 9928 9975 . + . ID=g14316.t1.utr5p1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 9928 10137 . + . ID=g14316.t1.exon1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 9976 10137 . + 0 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 10293 10430 . + . ID=g14316.t1.exon2;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 10293 10430 . + 0 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 10749 10850 . + . ID=g14316.t1.exon3;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 10749 10850 . + 0 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 11024 11142 . + . ID=g14316.t1.exon4;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 11024 11142 . + 0 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 11373 11465 . + . ID=g14316.t1.exon5;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 11373 11465 . + 1 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 11810 11938 . + . ID=g14316.t1.exon6;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 11810 11938 . + 1 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 12127 12242 . + . ID=g14316.t1.exon7;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 12127 12242 . + 1 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 12506 12590 . + . ID=g14316.t1.exon8;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 12506 12590 . + 2 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 12889 12988 . + . ID=g14316.t1.exon9;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 12889 12988 . + 1 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 13373 13541 . + . ID=g14316.t1.exon10;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 13373 13541 . + 0 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 13696 13773 . + . ID=g14316.t1.exon11;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 13696 13773 . + 2 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 13926 14040 . + . ID=g14316.t1.exon12;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 13926 14040 . + 2 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . exon 14214 14466 . + . ID=g14316.t1.exon13;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . CDS 14214 14319 . + 1 ID=cds.g14316.t1;Parent=g14316.t1 NODE_844_length_16885_cov_41.3473 . three_prime_UTR 14320 14466 . + . ID=g14316.t1.utr3p1;Parent=g14316.t1 #PROT g14316.t1 g14316 MPAPIAVDADELQQQLINEIDAKETVDTFNYATAHGLDHQAVVGAKNSLTAIKDLLTTEQLEIQDLVLTEEGLDIVNNGSHEAKVYAAVPAGGILQPDLMKAVPNANIGFSKAMQNGWIKTEKNAEGKPWITKKVDTIVDQVRVDLQDIQKKDYAKFPENHIKDLKKRKLAATLVIKSFKMGKGPAFTTKIEKPVADLTAEMLTSGEWKTLKFKDYNFNSLGVAPSGGHLHPLMKVRKEFREIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDSHDTFFIRDPAQTLDIPADYLQRVKDVHEKGGYGSVGYRYDWKVEEARKNVLRTHTTAVSARMLYQLAQQKTFSPVKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLTLGDLIGVIAQFFKKLGIEKLRFKPAYNPYTEPSMEVFSYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVVVIAWGLSLERPTMIKYGINNIRDLVGHKVKLEMVHTNPICRLDN* # ORIGINAL: g14317.t1 original gene structure, not modified by PASA NODE_844_length_16885_cov_41.3473 AUGUSTUS gene 14650 16690 . - . ID=g14317;Name=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS mRNA 14650 16690 . - . ID=g14317.t1;Parent=g14317;Name=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 16472 16690 . - . ID=g14317.t1.exon1;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 16472 16690 . - 0 ID=cds.g14317.t1;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 16063 16317 . - . ID=g14317.t1.exon2;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 16063 16317 . - 0 ID=cds.g14317.t1;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 15843 15928 . - . ID=g14317.t1.exon3;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 15843 15928 . - 0 ID=cds.g14317.t1;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 15210 15362 . - . ID=g14317.t1.exon4;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 15210 15362 . - 1 ID=cds.g14317.t1;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 14650 14932 . - . ID=g14317.t1.exon5;Parent=g14317.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 14650 14932 . - 1 ID=cds.g14317.t1;Parent=g14317.t1 #PROT g14317.t1 g14317 MVNFIVSDSDDSGESDRDSGTIDGNGNENDGDNSDGDLVDPRPFLGNRTPLRDANARVVGRGIAASRTPSSEMVKGSTPAHPSRSAPATPSASGAAFRRDKERLARELFAEFNTRAFGGALPAKMEVVWSKTLNTTAGRAILTKRGFEYTAAIELSTKVVDSEERLRSTLCHEMCHAVAWLVDKTSKFRYKCSSVECGYSYGRHSKSIDTSKMGCGKCGGRLVLEGKTNKDGTPAKQRTASGFSVYVKQHFASCKRDLGNGATHADVMRALSRKYGEEKDRLKGGSSASAVGNDADADADRDASNSFDEDEVEAVDVRSVQKALSHINLCD* # ORIGINAL: g14314.t1 original gene structure, not modified by PASA NODE_844_length_16885_cov_41.3473 AUGUSTUS gene 2617 6734 . + . ID=g14314;Name=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS mRNA 2617 6734 . + . ID=g14314.t1;Parent=g14314;Name=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 2617 3434 . + . ID=g14314.t1.exon1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 2617 3434 . + 0 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 3594 3803 . + . ID=g14314.t1.exon2;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 3594 3803 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 4106 4339 . + . ID=g14314.t1.exon3;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 4106 4339 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 4528 4632 . + . ID=g14314.t1.exon4;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 4528 4632 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 4879 5409 . + . ID=g14314.t1.exon5;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 4879 5409 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 5601 5909 . + . ID=g14314.t1.exon6;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 5601 5909 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 6142 6286 . + . ID=g14314.t1.exon7;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 6142 6286 . + 1 ID=cds.g14314.t1;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS exon 6600 6734 . + . ID=g14314.t1.exon8;Parent=g14314.t1 NODE_844_length_16885_cov_41.3473 AUGUSTUS CDS 6600 6734 . + 0 ID=cds.g14314.t1;Parent=g14314.t1 #PROT g14314.t1 g14314 MAQLARTKFDPITIKIEDRKTTVTPIAFSFDELNLKHKKDSVGKGSFLDGASDDSGAVCSLVPGIHDADFVHAAAALYDVGLPAVTLEVIYSMLSKPNATTIVLLRSEEDVLEERRQLRAKSSERRHSHSRPNTPKRTDGAQPIAAEDVAIEHPLEPAHPHQFTGGKPRHDHHMATDGRRTPDNRMSLDGAMGAGGHGGHDGQAAAQQHMLHPTSASNLASGSAADAVSLTDAELDSAAIFSDSEAEDEPEGEDPEVSELMTERTAYVREAYNRQKRSMTSSARGERRNSGAHADASQQVGIESRLLGALTLEQVLHAQPGTGRVMQITLLGVRPKFRRHGIGGRLIGMVKDPLVVGAYDAMITYADNGATFFFQKHHFKADTILNLRYVSLIERWDNSVLMSLVPGFAHTTPAMERLMDKAFDEDLLAWRRLRATEYTQELDLIERLRSEIKRLRSVVSEKDDEIGRLNRELVRARRPQSAASITGLSSESQQLANGSSGPATSRAGPAGVSASQNQSPQGTSVALHSVDSFHDSRVAASGSSSMHVMDCSDADRPLSTASSSLAKHVASSGGNGASSIGLKLFSGIPGITVLDSPLGSTNGGVLPKYIDAASPEYTEITSNFLGGMRETGKSFKVMEVTAPVVTKAMRASFDARVDALRDPNLQMRLWFGGHPDVVQRCAAAGSFAWISASRDGNDALATVAQLAFGDFGKGIYFSGSVVAATRRSEASAAGDRFAILALVGLGMTESILKPNSERSAAPDGFDSIAVPGRTRRPSHSASGQRPSSASSTSSASSLSLVSSPPDVEYVVFDGMQAMPLYCIRYREG* # PASA_UPDATE: g10474.t1, single gene model update, valid-1, status:[pasa:asmbl_393,status:12], valid-1 NODE_1102_length_13974_cov_40.412 . gene 3453 12386 . - . ID=g10474;Name=g10474.t1 NODE_1102_length_13974_cov_40.412 . mRNA 3453 12386 . - . ID=g10474.t1;Parent=g10474;Name=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 11528 12386 . - . ID=g10474.t1.exon1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 11528 12386 . - 0 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 5697 11308 . - . ID=g10474.t1.exon2;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 5697 11308 . - 2 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 5374 5482 . - . ID=g10474.t1.exon3;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 5374 5482 . - 0 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 4997 5211 . - . ID=g10474.t1.exon4;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 4997 5211 . - 2 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 4691 4777 . - . ID=g10474.t1.exon5;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 4691 4777 . - 0 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 4207 4352 . - . ID=g10474.t1.exon6;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 4207 4352 . - 0 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 3850 3964 . - . ID=g10474.t1.exon7;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 3850 3964 . - 1 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . exon 3453 3630 . - . ID=g10474.t1.exon8;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . CDS 3562 3630 . - 0 ID=cds.g10474.t1;Parent=g10474.t1 NODE_1102_length_13974_cov_40.412 . three_prime_UTR 3453 3561 . - . ID=g10474.t1.utr3p1;Parent=g10474.t1 #PROT g10474.t1 g10474 MAATADPLGGEAQRWSIVETAASFSGDEDVTVKITHSTDAHTGVSSEVDYSTSLYTADVLATVSSDPLLDDGAPGAGHVPNFFVESSTEGVCMVVGTQIHVFDGGCVRVETTISLDCEPDAVAWSQRGKFLVVADRLGSLHFLHVPTRSILFSQELVQCPPATGSSLSVVAPTFAKVIFRAGATSAASDNEDDDDDGARSDVEAIHELIVVSTGGQGFRFTNVDLSTLQHAIACGDYTSAKSVKAAIGIERFSVAEQHPEGISGACLVAQGCGPDPLESVLCVAGSGRSGVSIWTCGTSRVTLVAGASLPHWQAGIRRVSSSADGRYLAVIDAAMGSLTLLDPTSLVVIAVLASDGEFADVTFLNPESSASDSNSTDGSDHADSRTGAMSLLNRRPLRIALLKRVASPQVRQKGNVPGVAGMALEIRTAVSLDIAYACGVGAKAVFATSHDSRDHAHVAEFRLADSQKGDRIVLKHLRETLPTSRFYRLLHTRRFEDAKMFARNYGLDIELVYQVQVTSMLEAAQGHVRTPGETATQLIAILKNISDEAYVIDFCLEAALPSVEDTRQMLEHARTLCSVDHAAASGSGQAERLASLYAALRRLGTYAIAYSANFEGRHWQEFRAGDMLQQLCSCLSSGKLHAAQAIWGRHKTEDSLASGVRAVIASIPEDILPSAQYTQWLGSEVVCRLASEEDAVFLLSWIEKRARALEAVEGRCWPANALAVIGLAMETQPPYLGDGPLDYSPGHVAMRYMSLCRLEAGTPLANLRTNLEDIQYLMTNHGMRMSLADYGAETPSSIAYVLLDRVAAAELVPSVVDNAVRPYLERHHFPVDKALLHYVVEAMGVAVAEGSVSSAERDSPREAWIVAAIGCMCEVELKAEAVLELMRHTAIPWSEAVDELIRAALAWSEHSRREDIVEQHRLLELRRSCNKHGISRDVNMSDVTQARGLMRRLVARTDVEDAFDDALKVVGAYSHLTELEAHVARVENLALATPLAALAHIKTRVPAELLSAVVGEVIEWVMEGVAGDIQLESDAEERLRFLDAGVALFNFLSSEKDIARTLAPVAVMDSASYGDVSQRLVNISSLQREHSEVVRPDDYAVDDFRVAMAARYVSEFVSAGYGIGDGDNADAHVPEPVDCLRKKSKRRATERSRLFRVGDLLLIPRRNMQLMLAEEMAQAGECEAVLAILAPDVHTAKASFSPHGGVAAAAPTIGGKSGKETQHIIHSLLDAVAREETRLTPDSGERLRNAAMRSVAYCSPNDLADTLELFRSLDVATDLIAHFETGETAPRGNASGLSGLSAVPDWLAGEDAQAYSSKNAPGAPAVDSSARAPFSFTKSGDDFGAWLSESFFSEDGLVLQDSAAIHTAAKYVSASFPDGFSERTPLPHKCRSLAGRGAVASQQNRSAGVQQPSRSPMTALAASGKECVKIAVDNRHTYVALRFACHGLAACTRHLSLALPEGALLAGLAQVGKASGPLIDDLLQSLSRKVLSSRVIDEGLAVGLVTARDDPSMSLDVVDEALASIVPPSPQSADTVAVYHTRRLSIATAGMHVASYFGFSKELSFFATDRLKTEWRRRMSDMGIKVDERRIGDSDGDEARFVPEILRLGGMDLQLALSFCVSHGIAQDVALCAYVEQLLLRPDGRPACNAERVRATSACERVSKEALAVLLFDRLLAKISPYDYETLGFVLTSAARLVTRDDGLAIAKRGLLLLDVLRFYDRRAAPSDWEKAFVPASGGKGSLAPTRAAAPSAATMSRDAGASERNLPSRRLPFHALIECDPWLVLAPEIAPSTVPRLLPLAKALMMTADQFHVRAVHIMSQLPAGERFSFAVGGRPFLLAVADPEIAIATAKFAADSATGREKIEAFETAVEIASRWRDAQKEAGSASGEDKAERTLQRLRDLCTRTATEHALREFGLESVEYLGLITKPQELIARLYLRAPLESATTVQGMEKGEMGKMGGHGGRRSLLALVDEVAMRNGLSADKIRREIVHKWIMHGPEAAADGAQGSAGSAIRRMQFLLGREPREQCVSYMLNVAFLPAANKASEAARVRALSLLFLLAGTSTVATVYKGPAYEVGDRMQQLQYLCTLGELHMGQTVDEFATANKEGLARGLVRNHPADPKAVRMAADLCLDANVRDAQLWTALLQLLSRFGMVSYIRYALQRLATNSEICQVPGLSVLWMSVIHKSIAAFKDVAEDKVESTASDLVSFALQCPLVMELDLRPLCDLLVSRGLTRLALNCALANASVNVTKFVDAARNIVKDVLKGSQAQHTLLLDALAAHDAHSALANELRQSVYDDLDARGLYPALVGGPFFASFVRHLIVAGRIDKLLSATLASGRIDKAAELVTAYHAAHPDIPSAMECRAIGDGLTPLQVTRAYLVSRNMDSALAQLPDEPLAC* # ORIGINAL: g10475.t1 original gene structure, not modified by PASA NODE_1102_length_13974_cov_40.412 AUGUSTUS gene 12769 13872 . + . ID=g10475;Name=g10475.t1 NODE_1102_length_13974_cov_40.412 AUGUSTUS mRNA 12769 13872 . + . ID=g10475.t1;Parent=g10475;Name=g10475.t1 NODE_1102_length_13974_cov_40.412 AUGUSTUS exon 12769 13699 . + . ID=g10475.t1.exon1;Parent=g10475.t1 NODE_1102_length_13974_cov_40.412 AUGUSTUS CDS 12769 13699 . + 0 ID=cds.g10475.t1;Parent=g10475.t1 NODE_1102_length_13974_cov_40.412 AUGUSTUS exon 13829 13872 . + . ID=g10475.t1.exon2;Parent=g10475.t1 NODE_1102_length_13974_cov_40.412 AUGUSTUS CDS 13829 13872 . + 2 ID=cds.g10475.t1;Parent=g10475.t1 #PROT g10475.t1 g10475 MALSVIAALSTLLSRGARGQHPSEPAVAVPTCPVRETSVVSLHVRPFMLLWIHAGNRLNHEPDLASQSSVVPPCTQSTLRNSFTAQSSLRSPQRDMPITRHLIIICDTQMAESFYAQVMTEIVLPSHADRRSVCFGGQILAWIDICAGIAAKRLARRPCVTASVDDVCFMQPALAGEVVILRAMVNRSFKTSMEIGVRVESECLQTGERKYCCAAYLTFVCIDAAGRPQPVPQVIPETENEIMRFERADQKRKERLALKKVSLGGLTLDVSGGMQPPPHVTPVGQAFRFSSETLSHMTEIILPSQANTIGITLRTTGVHGFPTA* # PASA_UPDATE: g10473.t1, single gene model update, valid-1, status:[pasa:asmbl_392,status:3], valid-1 NODE_1102_length_13974_cov_40.412 . gene 172 3433 . + . ID=g10473;Name=g10473.t1 NODE_1102_length_13974_cov_40.412 . mRNA 172 3433 . + . ID=g10473.t1;Parent=g10473;Name=g10473.t1 NODE_1102_length_13974_cov_40.412 . five_prime_UTR 172 383 . + . ID=g10473.t1.utr5p1;Parent=g10473.t1 NODE_1102_length_13974_cov_40.412 . exon 172 417 . + . ID=g10473.t1.exon1;Parent=g10473.t1 NODE_1102_length_13974_cov_40.412 . CDS 384 417 . + 0 ID=cds.g10473.t1;Parent=g10473.t1 NODE_1102_length_13974_cov_40.412 . exon 707 3433 . + . ID=g10473.t1.exon2;Parent=g10473.t1 NODE_1102_length_13974_cov_40.412 . CDS 707 2853 . + 2 ID=cds.g10473.t1;Parent=g10473.t1 NODE_1102_length_13974_cov_40.412 . three_prime_UTR 2854 3433 . + . ID=g10473.t1.utr3p1;Parent=g10473.t1 #PROT g10473.t1 g10473 MAEHHSSKRARAGLGDSRDPLDRHAFSPIINHANVNNNFAHSESESSLAAATLACEESALSGYASSSKAARLTKSEERDEKDAAVGLDDIHRERGSGNTIGSPTGRRAFAEHSHPAPSLGNGVGITSSASPPSQQRGVFGHSGGTAFVAVGASSGVAGGHGGVSQDTQHHHQHNGSGGSHGGAATSGHAVSSGTAGAGGGNAYDFNSLEKELVDLERRQIMSGVKLPPLPIESEGVALQPLETPGLSSSSSSQPPLHIVQARRKSVAVYQPPQPSQPPQSSSASVQSGEAAMSQSQNVQSSSGGGASIEVRARRKSVHDELSAEGWSMRRRSVVDAADAMALVASMNSAPLTVAGAPITPSASGGAPASKGSAAVVSPTPVIASSSAGAVVHARKVLADDDQMSPVSREKAAVRLAEENSLLKARLAEREQQWQQRTKDTRQMLTQMREAQQKAETLEKAREADALRIAKLEEQLKRLEAELSLASKSASELARKGSGRSAHESKTSNEDVKESKRDRREREQREGEKDKEKEKEKEKEKERDRDRDKETLSSRSSRRRDKERERAEREKDRLSSRSQHSRGADGRSRGSREEISVDADDDDADDNGNGNGNNSDSAESLSGDPVSSSHSPVSEDTQRRRGSLSSPLFLDGTSSGRPTGSKRSKRDHASGKTAPSSGKGLPVLISGKGDTEDNAGDEKSRRDHGHHHHKDKQAKKEVPRSQACAIL* # ORIGINAL: g935.t1 original gene structure, not modified by PASA NODE_1494_length_10952_cov_42.1932 AUGUSTUS gene 7402 10842 . + . ID=g935;Name=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS mRNA 7402 10842 . + . ID=g935.t1;Parent=g935;Name=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 7402 8380 . + . ID=g935.t1.exon1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 7402 8380 . + 0 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 8525 8637 . + . ID=g935.t1.exon2;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 8525 8637 . + 2 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 9080 9265 . + . ID=g935.t1.exon3;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 9080 9265 . + 0 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 9587 9825 . + . ID=g935.t1.exon4;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 9587 9825 . + 0 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 10000 10186 . + . ID=g935.t1.exon5;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 10000 10186 . + 1 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 10339 10472 . + . ID=g935.t1.exon6;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 10339 10472 . + 0 ID=cds.g935.t1;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 10761 10842 . + . ID=g935.t1.exon7;Parent=g935.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 10761 10842 . + 1 ID=cds.g935.t1;Parent=g935.t1 #PROT g935.t1 g935 MAPAAKHPNAKGGKRSPSPAKKGLNVKNGSGKVNGVRKNGGVTNKGKAAAAAAAAAKGTAASSTASKAKATLKRTLPSGDFVMTISDSDEDVPVLDNDDSSDDESAKRKAKKKEKKGKDDVNPEFEFGDEGFGTNVRGGVVSTWDFKTAKAAVSQRDTTGLTSIDHKITRHLERKRFKLGDAARGKEEEDEEEDEPVDGGVDVVSKMVGVEGASSGSARDASESSDAGEKKGESDSESDVSEEDDEEEDESSDADDIVKSERKKAAFFSDAPEIAAMEKFTDMNLSRPLIRAITALGFTSPTPVQARTIPVALMARDICASAVTGSGKTAAFILPVLERLIYRPRRVTASRVLVLSPTRELAAQVHAMAEKLAQFTDIRLALVVGGLSEKGQESALASHPDIIVATPGRLIDHLHNTRSFDLQSIEVLIMDEADRLLEMGFREEVDEIVRNCPRQRQTMLFSATMTDEVEELVGLSLNQPVRLFVDKNREVASNLVQEFIRIRPTRESDCEPILLALCKRTFKRRCIVFFRSKKSAHRLKIIFGLMGLKGAELHGDLTQLQRLESLEQFKNGEVDFLLATDLAARGLDIVGVDYVINFAMPNSITQYIHRVGRTARAGRSGHAVSLVRESERKLLREVVK # ORIGINAL: g932.t1 original gene structure, not modified by PASA NODE_1494_length_10952_cov_42.1932 AUGUSTUS gene 297 540 . + . ID=g932;Name=g932.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS mRNA 297 540 . + . ID=g932.t1;Parent=g932;Name=g932.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 297 540 . + . ID=g932.t1.exon1;Parent=g932.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 297 540 . + 1 ID=cds.g932.t1;Parent=g932.t1 #PROT g932.t1 g932 VSSEEVRARPEFHRAHLTLPAKERSFFAIGKVTAIGPLEDPSSDPLGQIPGVIFYPLDFLTLSVLRQSIAIDDTEDMCVD* # PASA_UPDATE: g934.t1, single gene model update, valid-1, status:[pasa:asmbl_1766,status:12],[pasa:asmbl_1767,status:12], valid-1 NODE_1494_length_10952_cov_42.1932 . gene 2637 6653 . - . ID=g934;Name=g934.t1 NODE_1494_length_10952_cov_42.1932 . mRNA 2637 6653 . - . ID=g934.t1;Parent=g934;Name=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 6528 6653 . - . ID=g934.t1.exon1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 6528 6653 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 6320 6417 . - . ID=g934.t1.exon2;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 6320 6417 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 5978 6074 . - . ID=g934.t1.exon3;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 5978 6074 . - 1 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 5643 5795 . - . ID=g934.t1.exon4;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 5643 5795 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 5213 5359 . - . ID=g934.t1.exon5;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 5213 5359 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 4794 4976 . - . ID=g934.t1.exon6;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 4794 4976 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 4460 4549 . - . ID=g934.t1.exon7;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 4460 4549 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 4063 4243 . - . ID=g934.t1.exon8;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 4063 4243 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 3646 3740 . - . ID=g934.t1.exon9;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 3646 3740 . - 2 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . exon 2637 3325 . - . ID=g934.t1.exon10;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . CDS 3245 3325 . - 0 ID=cds.g934.t1;Parent=g934.t1 NODE_1494_length_10952_cov_42.1932 . three_prime_UTR 2637 3244 . - . ID=g934.t1.utr3p1;Parent=g934.t1 #PROT g934.t1 g934 MQRTATSFKLKHRSVNAVKQNANVFRMGDEFVNVLMWGMSHMLNEMCAQEKPSLLLNDHFKAFSKIKVKNHLSPRPNLPDKYKVKEYCPHVFRDLRERFGIDTQSLLDSVEQALPDRLETNGRSSSQFFMTADHRFVIKSISSDEIDVFHSMLQPYHQFVVEEHAQTLLPHYVGFYRITIEKTEVYFVIMRSVLPCSLPVSEVYDLKGSSVDRSANKDKDKDAKDNKDTKEKEKEKEKEKEKEKEKEKEKGEKDGRETPTEGLVVTFKDNDFVAKGRRLLLGEERRRSFLDRLRMDIRFLERNKLMDYSLLVGVYSQAAAEEEAAALRDSAPSTSDTTTETVPTQPDASDVFAVPGAHGKEIYFMGIIDVLTEYNAKKKAAHTAKTMKHGRDADISTVNPEHYARRFLDFVEGVID* # ORIGINAL: g933.t1 original gene structure, not modified by PASA NODE_1494_length_10952_cov_42.1932 AUGUSTUS gene 1287 2348 . + . ID=g933;Name=g933.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS mRNA 1287 2348 . + . ID=g933.t1;Parent=g933;Name=g933.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS exon 1287 2348 . + . ID=g933.t1.exon1;Parent=g933.t1 NODE_1494_length_10952_cov_42.1932 AUGUSTUS CDS 1287 2348 . + 0 ID=cds.g933.t1;Parent=g933.t1 #PROT g933.t1 g933 MTIATMNAVAIRNYGNADRLEAVVLPVPTPGAHDILVKVAAVSVNPVDRKKRQNFGAHYDTAAQFDQPLVLGWDASGTVTAVGSAVSLFSVGDEVFFAGSLIRPGSNAEYTLVDERIAAKKPQSLSHAESAAIPLVALTAWEALVDGLSIPIPSDASAAAAINSKKTKSILIIAGAGGVGSLAIQIAKRVLGLRVIATASRNESRKYCLENGADDVISHAEPLAEGLKSIGLTGVDYIFCTAGIADYIDQAVEIANPSGKIAAIDDDNLKSFDLSRLKLKRLSFHFELMFTRPIFGYELERQNEILSEISRLLDAGVLNATLTKTYAFSAENLRKAHLDIESNRTIGKIALTL* # ORIGINAL: g1870.t1 original gene structure, not modified by PASA NODE_1983_length_8200_cov_26.9679 AUGUSTUS gene 2308 2736 . - . ID=g1870;Name=g1870.t1 NODE_1983_length_8200_cov_26.9679 AUGUSTUS mRNA 2308 2736 . - . ID=g1870.t1;Parent=g1870;Name=g1870.t1 NODE_1983_length_8200_cov_26.9679 AUGUSTUS exon 2308 2736 . - . ID=g1870.t1.exon1;Parent=g1870.t1 NODE_1983_length_8200_cov_26.9679 AUGUSTUS CDS 2308 2736 . - 0 ID=cds.g1870.t1;Parent=g1870.t1 #PROT g1870.t1 g1870 MQAQTIPCLPALPSRAARTSTIASTLYPGEFYGLSIYGGVIDLRVSSLVIDQGGRAVAGQWCKPFGCGGSKLNVWLWGDDQLLHQGSIRAAAAEIPCALSGGCYPPDSAINKFGCNDVDSMQSSYVGAEACATAEQNSAFEG* # PASA_UPDATE: g1871.t1, single gene model update, valid-1, status:[pasa:asmbl_3160,status:12], valid-1 NODE_1983_length_8200_cov_26.9679 . gene 3679 6773 . + . ID=g1871;Name=g1871.t1 NODE_1983_length_8200_cov_26.9679 . mRNA 3679 6773 . + . ID=g1871.t1;Parent=g1871;Name=g1871.t1 NODE_1983_length_8200_cov_26.9679 . five_prime_UTR 3679 3869 . + . ID=g1871.t1.utr5p1;Parent=g1871.t1 NODE_1983_length_8200_cov_26.9679 . exon 3679 6773 . + . ID=g1871.t1.exon1;Parent=g1871.t1 NODE_1983_length_8200_cov_26.9679 . CDS 3870 6773 . + 0 ID=cds.g1871.t1;Parent=g1871.t1 #PROT g1871.t1 g1871 MSPLEHLAATLRFVSVLIVFTLQSRLALADGGGPVIFEHIQFGAPPSANCPLGQYPTPCLTSTVNDPYAEGPIDEILNRLRAAGNNNFYPQDPNISWSCCKACKAGFACLGGSLSDRDLIANPIAIPCTAENWMKFKNVANWLGLTASSVPTVVTQFYQDERGQGACKDCPLGSIGDRTYCYCVEGYYGDYGPNGFQGRPSDEFPPTPSSCVKCPPLSNSQARSSDITHCNCVDGFFRTSKFTLTEPCRPILRPPEPSTPAATVLSDTAISVSWTPTADTYGHIVRYDVLVNGKPQNFETNLPDGALATTARIVDLTPSTTYCVTVSAYTLAGGTVSKEQCGVVTRPKGCKEGLSMPGSYMLVGGDISLCQEGTFSTKCNQTACTPCLAGLYLPYTGANSSAQCLACPSGTKSMAGAGACVRCPDTVVCPRTTPNASMLKATWQPMAPLSPLVRLDDTGVVPIMPLAQPLVKQSTMTTGGLAFLWLSILAVASVAIVLLVAIFCPPVSCDESVDKQQQPILAKALTKVDFIFLSVIRDVAITAQTNGSISGVAQADCGGKAPVASGQSGLSGVHFKISKIPSRRRATVTLLYFAGVVVAAGYLLGQWMNTRFVETRTVVPMYNSALGVVVEPPPGLTFRITLLGTRMACADLNVTVKTLESYDIQTSEALAYISECTHNLTASKTSSSDAGFGVHSDSDLVGCDQAGASCMTVTLRPTDDVKTYRSQMVGITLTSQSGHPVWAQAIRAWASVPSWSKGSMSWVYFSAPSIKTSSRSALGVNSTGGAILSGQTFTTPVAVSHGYLVYNVDEIRGRGFELPLSGEPAVRMVKEPDYFISLAIPISVSATETRIEVVETRTITDLLARIFSFIGAIQTAAAIGLWAVYKWPSFWTGCVGLAGKFGSRRRHIDGDGAESDLRTCLHRFSCRCRDTDGVDSADDEEAILLQSASRMETTRRRSSSQKSQNED* # PASA_UPDATE: g1869.t1, single gene model update, valid-1, status:[pasa:asmbl_3161,status:12], valid-1 NODE_1983_length_8200_cov_26.9679 . gene 74 1572 . + . ID=g1869;Name=g1869.t1 NODE_1983_length_8200_cov_26.9679 . mRNA 74 1572 . + . ID=g1869.t1;Parent=g1869;Name=g1869.t1 NODE_1983_length_8200_cov_26.9679 . five_prime_UTR 74 113 . + . ID=g1869.t1.utr5p1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . exon 74 196 . + . ID=g1869.t1.exon1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . CDS 114 196 . + 0 ID=cds.g1869.t1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . exon 474 641 . + . ID=g1869.t1.exon2;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . CDS 474 641 . + 1 ID=cds.g1869.t1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . exon 1007 1037 . + . ID=g1869.t1.exon3;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . CDS 1007 1037 . + 1 ID=cds.g1869.t1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . exon 1237 1572 . + . ID=g1869.t1.exon4;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . CDS 1237 1344 . + 0 ID=cds.g1869.t1;Parent=g1869.t1 NODE_1983_length_8200_cov_26.9679 . three_prime_UTR 1345 1572 . + . ID=g1869.t1.utr3p1;Parent=g1869.t1 #PROT g1869.t1 g1869 MEMATVFLGTRSSEYPVPMVKKLRLHFNKFIKHCGEALELNEALIKSDQFEYQNDLRMKYRDLRERLSPYIMPERKEAASSVFSNRRSGQEGEEQSEAFVSKEAKAVLDFIGGATPEAEKDVISFLSRK* # ORIGINAL: g5876.t1 original gene structure, not modified by PASA NODE_812_length_17413_cov_43.5568 AUGUSTUS gene 16193 17051 . + . ID=g5876;Name=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS mRNA 16193 17051 . + . ID=g5876.t1;Parent=g5876;Name=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 16193 16252 . + . ID=g5876.t1.exon1;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 16193 16252 . + 0 ID=cds.g5876.t1;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 16420 16503 . + . ID=g5876.t1.exon2;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 16420 16503 . + 0 ID=cds.g5876.t1;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 16616 16671 . + . ID=g5876.t1.exon3;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 16616 16671 . + 0 ID=cds.g5876.t1;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 16786 16929 . + . ID=g5876.t1.exon4;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 16786 16929 . + 1 ID=cds.g5876.t1;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 17021 17051 . + . ID=g5876.t1.exon5;Parent=g5876.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 17021 17051 . + 1 ID=cds.g5876.t1;Parent=g5876.t1 #PROT g5876.t1 g5876 MTELGHLLPPSWKSTVRAWLDEDIPSFDYGGYVVGEKDDVATLFCKSPGVLAGRPFFEEVFTQLECRVEWNNNDGDVLSGKKDVVARVYGKARNLLMGERTALNMLARASGIATSTRVTDSMLD* # PASA_UPDATE: g5873.t1, single gene model update, valid-1, status:[pasa:asmbl_9507,status:3], valid-1 NODE_812_length_17413_cov_43.5568 . gene 8287 12285 . - . ID=g5873;Name=g5873.t1 NODE_812_length_17413_cov_43.5568 . mRNA 8287 12285 . - . ID=g5873.t1;Parent=g5873;Name=g5873.t1 NODE_812_length_17413_cov_43.5568 . five_prime_UTR 12183 12285 . - . ID=g5873.t1.utr5p1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 12090 12285 . - . ID=g5873.t1.exon1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 12090 12182 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 11879 11999 . - . ID=g5873.t1.exon2;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 11879 11999 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 11593 11693 . - . ID=g5873.t1.exon3;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 11593 11693 . - 2 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 11383 11480 . - . ID=g5873.t1.exon4;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 11383 11480 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 10158 11133 . - . ID=g5873.t1.exon5;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 10158 11133 . - 1 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 9773 9896 . - . ID=g5873.t1.exon6;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 9773 9896 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 9525 9604 . - . ID=g5873.t1.exon7;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 9525 9604 . - 2 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 8811 8948 . - . ID=g5873.t1.exon8;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 8811 8948 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . exon 8287 8610 . - . ID=g5873.t1.exon9;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . CDS 8392 8610 . - 0 ID=cds.g5873.t1;Parent=g5873.t1 NODE_812_length_17413_cov_43.5568 . three_prime_UTR 8287 8391 . - . ID=g5873.t1.utr3p1;Parent=g5873.t1 #PROT g5873.t1 g5873 MGKQKNKGAALGRSIMRDRFKKGGVADAEGWIHTTELNDGYDWGRLQSVTEQGDLDEFLATAKLAGTEFTAEKLNVTVVSGGEHNSAHMSVEKAKAVKEAQEANMDMLRVPRRPKWDENTSGEELQLAERETFLEWRRQLAVLQEKDHITLSPFERNIEVWRQLWRVIERSHVIVQIVDARNPLLRSDDLDKYVAEVDPSKRTLLLINKADMLSQEQRNIWKDYLNSAGIPFAFWSANLEKKRQERLEAELALLAEQQGEEEEDGDAEEGSAESAESGESVDGGDDSVDDVESTGTGGGVEVKKSGGPKDATATNKQADKLTDALGERLSGMTVDADADAELGSGDDYADVLTREALLDLLRAQCPPNESLGEGRRKTIGLVGYPNVGKSSTINALCQDKKVAVSATPGKTKHFQTILLDEETLLCDCPGLVFPSFASTKAELVVSGMLPIDQMRDFLGPASLVAERIPRKLFETTYGIQIVRPGEDEDPNRKPTGHELLCAYGFARGFMTAHGSPDEPRSARYILKDYCKGKFVYCHPPPTMSADDFNATTIAWPADVDIGAESELDAKSLVVAGKQKTPRYDNRVDRDFFRQSDVGVVVRGVQHGAKGDHVKIVHPHKRNDQGADGQGKKHNNKHKREKVRRVMNEA* # PASA_UPDATE: g5871.t1, single gene model update, valid-1, status:[pasa:asmbl_9506,status:12], valid-1 NODE_812_length_17413_cov_43.5568 . gene 798 4302 . - . ID=g5871;Name=g5871.t1 NODE_812_length_17413_cov_43.5568 . mRNA 798 4302 . - . ID=g5871.t1;Parent=g5871;Name=g5871.t1 NODE_812_length_17413_cov_43.5568 . five_prime_UTR 4235 4302 . - . ID=g5871.t1.utr5p1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 4194 4302 . - . ID=g5871.t1.exon1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 4194 4234 . - 0 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 3956 4061 . - . ID=g5871.t1.exon2;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 3956 4061 . - 1 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 3299 3811 . - . ID=g5871.t1.exon3;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 3299 3811 . - 0 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 2826 2975 . - . ID=g5871.t1.exon4;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 2826 2975 . - 0 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 2558 2660 . - . ID=g5871.t1.exon5;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 2558 2660 . - 0 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 2200 2416 . - . ID=g5871.t1.exon6;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 2200 2416 . - 2 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 1913 2001 . - . ID=g5871.t1.exon7;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 1913 2001 . - 1 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 1715 1792 . - . ID=g5871.t1.exon8;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 1715 1792 . - 2 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 1370 1575 . - . ID=g5871.t1.exon9;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 1370 1575 . - 2 ID=cds.g5871.t1;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . exon 798 1016 . - . ID=g5871.t1.exon10;Parent=g5871.t1 NODE_812_length_17413_cov_43.5568 . CDS 798 1016 . - 0 ID=cds.g5871.t1;Parent=g5871.t1;3_prime_partial=true #PROT g5871.t1 g5871 MGKKDKKKGGYDDWDASDDAEAFDAPKAASLVTKPAATAPNAKGTKKQESPTVSDDDGDNDAPAFGKGGNKASNKARPAADTEDEESDDDDGPTVKTAAQKKAEKKEKEKEKARRKKEALKEQQKKQTGGGAAAAVEDPSQKNGAKKEVGKTAMSAPAVGNSVAAVVPAEDEEESDEDGGEGGEAGGDKKNKKKKKKKAAEKGADKKDDKKPSAAVKKMQEALQALKLEEERQRQEAIARQKALEEEERRLEEEARLEEEKKRRKKEKEKERKERLKKEGKLLSKADKEKLARDKAALEAMRAQGIQVPSGHGAHADDDEAGGEALVADGGAPKKQKVVYTKKKKAPQLNQQHSKGDEEKHADAPADGAEVSPTATKAGDASDEDAVVPKSTPEVDAGVKATWESDDSEEDDEEAPKTAAAASASEPEKKPVASAASAASAASATSVAKSKAAAKKEETSDSESDDSSSEESDEADHTDHARPARKDALATKKAEAARSIQARRVEANANKSKDRLRSPVCCVLGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGASYFPIEAISEQTSKLKD # PASA_UPDATE: g5874.t1, single gene model update, valid-1, status:[pasa:asmbl_9508,status:12], valid-1 NODE_812_length_17413_cov_43.5568 . gene 12650 14569 . + . ID=g5874;Name=g5874.t1 NODE_812_length_17413_cov_43.5568 . mRNA 12650 14569 . + . ID=g5874.t1;Parent=g5874;Name=g5874.t1 NODE_812_length_17413_cov_43.5568 . five_prime_UTR 12650 12703 . + . ID=g5874.t1.utr5p1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 12650 12880 . + . ID=g5874.t1.exon1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 12704 12880 . + 0 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 13111 13361 . + . ID=g5874.t1.exon2;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 13111 13361 . + 0 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 13468 13709 . + . ID=g5874.t1.exon3;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 13468 13709 . + 1 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 14015 14018 . + . ID=g5874.t1.exon4;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 14015 14018 . + 2 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 14150 14215 . + . ID=g5874.t1.exon5;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 14150 14215 . + 1 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . exon 14347 14569 . + . ID=g5874.t1.exon6;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . CDS 14347 14431 . + 1 ID=cds.g5874.t1;Parent=g5874.t1 NODE_812_length_17413_cov_43.5568 . three_prime_UTR 14432 14569 . + . ID=g5874.t1.utr3p1;Parent=g5874.t1 #PROT g5874.t1 g5874 MEGLSWSRQGLWDSLTSQWPYDERWLFVVGTLVVHNGVFWSLNGLLYIVDHFGLFAKYKIRPKDYPPKPLIMDCLKKLFVSHFVIQWFALYYAWPVFERAGVTSKGPVPPLTTVLRDIVLMFLVNDTLFYWAHRGLHHRSIYKYIHKQHHKFNTSIGIAAEYAHPVESLLANTIPTVAGAALLGAHMSTFWLYLALRIHETVDAHSGYSFPFSLWEHAIFSGADRHDFHHSHNKGNYGGAPTVFWDWLCGTDGEYKKWKAAGGKDVAHKSDKTN* # PASA_UPDATE: g5872.t1, single gene model update, valid-1, status:[pasa:asmbl_9509,status:12], valid-1 NODE_812_length_17413_cov_43.5568 . gene 5544 7621 . + . ID=g5872;Name=g5872.t1 NODE_812_length_17413_cov_43.5568 . mRNA 5544 7621 . + . ID=g5872.t1;Parent=g5872;Name=g5872.t1 NODE_812_length_17413_cov_43.5568 . exon 5544 7621 . + . ID=g5872.t1.exon1;Parent=g5872.t1 NODE_812_length_17413_cov_43.5568 . CDS 5544 7607 . + 0 ID=cds.g5872.t1;Parent=g5872.t1 NODE_812_length_17413_cov_43.5568 . three_prime_UTR 7608 7621 . + . ID=g5872.t1.utr3p1;Parent=g5872.t1 #PROT g5872.t1 g5872 MAFPNRASVVIMNPEYATEDPPPATDEFTRPVSPRAAAAVGRAGTVARRQLQPSPLRPGHPDNPRRAPPGISVQLTDTAGSSLGVVVEAVDVDGLVAADRGQGQGGAQPRASVDTQLHGGVRENMLVWEHDTWWYTITFSVFPLIALLAAPVLLLLLSFCKFGGAPLSDSTAAADAQVVMEMSVFILLPIVSLCTIAYHQLFPLSAGRLLDPMSHLQPLPVLIRPIALFTIMYEVLVMTSDVHDGARLAAAEKGMLIVFQLVLVCFMLLLLSAQFQPAKLDKRKDAKNRALTCVLMHMCIVNLVLWYRCLVTSVFEQQNTAAEDYFGRTSWRLLQAILLPFQVAFHMVAILCCFEYGHRVMQWQARAVIDSITFGVLPESIMARGDVPLAPKSHSYPLSPRPTESEPQSPSSIERMGSTDKLNVTDSKASELSYRRVRTGTHSHARGRPQRHEYHLPDQKENFARVLAETLGYVVVGVLPFIAAIRLLSSSSTTVSVDAADIAITCFAVGLGLLILYLMAYLPRKKGELMYGGFSKLKFSFACIAIVFQIVRFGLAMKLEGVWASVRCVSFLFLVIVLGVMETIVSNKENWTWPQSGWLPFLAASVLAALLTEIVSEAADRQAQLEEHHHVTTAIIGAERFAGMLSPLNIDFLMHSFATFMMWSKGSRQKSDGGGGGGRARTSKLFS* # ORIGINAL: g5875.t1 original gene structure, not modified by PASA NODE_812_length_17413_cov_43.5568 AUGUSTUS gene 14771 15776 . - . ID=g5875;Name=g5875.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS mRNA 14771 15776 . - . ID=g5875.t1;Parent=g5875;Name=g5875.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 15533 15776 . - . ID=g5875.t1.exon1;Parent=g5875.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 15533 15776 . - 0 ID=cds.g5875.t1;Parent=g5875.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS exon 14771 15405 . - . ID=g5875.t1.exon2;Parent=g5875.t1 NODE_812_length_17413_cov_43.5568 AUGUSTUS CDS 14771 15405 . - 2 ID=cds.g5875.t1;Parent=g5875.t1 #PROT g5875.t1 g5875 MEALVPTDERTASASSTTISASLDRDTNASVAFSTVLTEHSFDVSDGDENAVVSLTSDGSAAHHILAQLHEQNAELLRRVSDLEHLQHNSARNSAGGAMVSPSTISYLRPDDAVENTAASAAAGPVGALASGVNLTPRSSLYGTAGGKGISAVAAEILRSLVSSPATSPRGSQGNVVLFATEAGQGDALVEADEFAVLIARLAEADNPRQREDLVMTAARSFSVSCRQLGRVFAVLKYPSERLSAAVAMGRRLVDAENARVVLGPLLCTESSAMRELILDALARAADGSAHR* # ORIGINAL: g7920.t1 original gene structure, not modified by PASA NODE_2109_length_7700_cov_43.3765 AUGUSTUS gene 2721 3425 . - . ID=g7920;Name=g7920.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS mRNA 2721 3425 . - . ID=g7920.t1;Parent=g7920;Name=g7920.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS exon 3096 3425 . - . ID=g7920.t1.exon1;Parent=g7920.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS CDS 3096 3425 . - 0 ID=cds.g7920.t1;Parent=g7920.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS exon 2721 2912 . - . ID=g7920.t1.exon2;Parent=g7920.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS CDS 2721 2912 . - 0 ID=cds.g7920.t1;Parent=g7920.t1 #PROT g7920.t1 g7920 MAAVSNAAPPAVDASSPQTQTPTPQRNANVNDLPLTPTDLALVGVMALASGFGGSILYARRRNSVAYREALARTGGVALATKALGYGTILCGAFAATLVFTVRKTMDVHSMPEFAEKMRAVFSPIRQQSKEVAPDEDEKAVYSFFDGVFTRSTIPADDGLQGEKVTESVDHTK* # PASA_UPDATE: g7921.t1, single gene model update, valid-1, status:[pasa:asmbl_3538,status:3], valid-1 NODE_2109_length_7700_cov_43.3765 . gene 3671 6077 . + . ID=g7921;Name=g7921.t1 NODE_2109_length_7700_cov_43.3765 . mRNA 3671 6077 . + . ID=g7921.t1;Parent=g7921;Name=g7921.t1 NODE_2109_length_7700_cov_43.3765 . five_prime_UTR 3671 4237 . + . ID=g7921.t1.utr5p1;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . exon 3671 4384 . + . ID=g7921.t1.exon1;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . CDS 4238 4384 . + 0 ID=cds.g7921.t1;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . exon 4803 4949 . + . ID=g7921.t1.exon2;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . CDS 4803 4949 . + 0 ID=cds.g7921.t1;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . exon 5418 5584 . + . ID=g7921.t1.exon3;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . CDS 5418 5584 . + 0 ID=cds.g7921.t1;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . exon 5927 6077 . + . ID=g7921.t1.exon4;Parent=g7921.t1 NODE_2109_length_7700_cov_43.3765 . CDS 5927 6077 . + 1 ID=cds.g7921.t1;Parent=g7921.t1 #PROT g7921.t1 g7921 MLLVLPPLFLHGLDRQDERTPLHWACSGGQEDIVELLLDMGADVKGTDESNWTPLHIAASAGHAGIVRRLLAANAQIDAVNETGQTALHYAASKNRRECVKLLLESNAPLNKKDKTNSTALHRAAARGHVEAIKMLLDAGASVTPKDADKNTALHLAVSEDFAEAALLLAERGGLDEENADEKTPLDLASDALRPRLKAFVEK* # ORIGINAL: g7922.t1 original gene structure, not modified by PASA NODE_2109_length_7700_cov_43.3765 AUGUSTUS gene 6861 7628 . - . ID=g7922;Name=g7922.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS mRNA 6861 7628 . - . ID=g7922.t1;Parent=g7922;Name=g7922.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS exon 6861 7628 . - . ID=g7922.t1.exon1;Parent=g7922.t1 NODE_2109_length_7700_cov_43.3765 AUGUSTUS CDS 6861 7628 . - 0 ID=cds.g7922.t1;Parent=g7922.t1 #PROT g7922.t1 g7922 MKIRCCKRVHADRDGDDFLDADELEEMFVREAQKLHKDGGDIHEEVARMREHVMREADANRDGRVSRDEFMATTASGAFEKDEGWVGVDDDEGLTEDEVALVVAELSLKEQDRQADEAAHRGGDADPDPPVEDNKDDSNNNNVNNNNPDVAANNDLKQDGLRDDAAMVQPPAQPADAQPAQAQAQAQAQAQAQAQAQAQPPVPNKQADSLERLAMLEKEQAAIRDARRAKGGAVRVVRHKVDQVHAEEEVMDWND* # PASA_UPDATE: g7918.t1, single gene model update, valid-1, status:[pasa:asmbl_3539,status:12], valid-1 NODE_2109_length_7700_cov_43.3765 . gene 39 1188 . - . ID=g7918;Name=g7918.t1 NODE_2109_length_7700_cov_43.3765 . mRNA 39 1188 . - . ID=g7918.t1;Parent=g7918;Name=g7918.t1 NODE_2109_length_7700_cov_43.3765 . five_prime_UTR 1160 1188 . - . ID=g7918.t1.utr5p1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . exon 995 1188 . - . ID=g7918.t1.exon1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . CDS 995 1159 . - 0 ID=cds.g7918.t1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . exon 738 890 . - . ID=g7918.t1.exon2;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . CDS 738 890 . - 0 ID=cds.g7918.t1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . exon 421 619 . - . ID=g7918.t1.exon3;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . CDS 421 619 . - 0 ID=cds.g7918.t1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . exon 39 327 . - . ID=g7918.t1.exon4;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . CDS 176 327 . - 2 ID=cds.g7918.t1;Parent=g7918.t1 NODE_2109_length_7700_cov_43.3765 . three_prime_UTR 39 175 . - . ID=g7918.t1.utr3p1;Parent=g7918.t1 #PROT g7918.t1 g7918 MKRPAVSKGKSRFDAVIRTIPYGLSFSLAIYFGWHALPTDFSFGFTWHPFLMTISYLLLTTPALLVISYPNAAIESTKRSDNVLSHVGMQFVAVALAQVAFGVIWQIKEDNAKPHFASWHGFLGMLVTLFGLMQSIFGLPLYFPSLRTRFSPSVPTSIFMHRMSGLSNYAMSGVTLVLSLYTNWFNHVSGGDPRAFAFALVAIVSLYSLTIFALARKFFFAR* # PASA_UPDATE: g7919.t1, single gene model update, valid-1, status:[pasa:asmbl_3537,status:12], valid-1 NODE_2109_length_7700_cov_43.3765 . gene 1444 2253 . + . ID=g7919;Name=g7919.t1 NODE_2109_length_7700_cov_43.3765 . mRNA 1444 2253 . + . ID=g7919.t1;Parent=g7919;Name=g7919.t1 NODE_2109_length_7700_cov_43.3765 . five_prime_UTR 1444 1522 . + . ID=g7919.t1.utr5p1;Parent=g7919.t1 NODE_2109_length_7700_cov_43.3765 . exon 1444 1604 . + . ID=g7919.t1.exon1;Parent=g7919.t1 NODE_2109_length_7700_cov_43.3765 . CDS 1523 1604 . + 0 ID=cds.g7919.t1;Parent=g7919.t1 NODE_2109_length_7700_cov_43.3765 . exon 1940 2253 . + . ID=g7919.t1.exon2;Parent=g7919.t1 NODE_2109_length_7700_cov_43.3765 . CDS 1940 2148 . + 2 ID=cds.g7919.t1;Parent=g7919.t1 NODE_2109_length_7700_cov_43.3765 . three_prime_UTR 2149 2253 . + . ID=g7919.t1.utr3p1;Parent=g7919.t1 #PROT g7919.t1 g7919 MARQTSVGGKEPGNVTSPPIEQYRRSIGKEENKKLKPVVSALRKNAQIRKKNKQQGNYNNLIIIGSFALIVLITLFGLFWMATEKLPVVGGEDEMV* # PASA_UPDATE: g10264.t1, single gene model update, valid-1, status:[pasa:asmbl_3562,status:12], valid-1 NODE_2118_length_7637_cov_42.4385 . gene 2983 6222 . + . ID=g10264;Name=g10264.t1 NODE_2118_length_7637_cov_42.4385 . mRNA 2983 6222 . + . ID=g10264.t1;Parent=g10264;Name=g10264.t1 NODE_2118_length_7637_cov_42.4385 . five_prime_UTR 2983 3000 . + . ID=g10264.t1.utr5p1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . exon 2983 3287 . + . ID=g10264.t1.exon1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . CDS 3001 3287 . + 0 ID=cds.g10264.t1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . exon 3666 3774 . + . ID=g10264.t1.exon2;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . CDS 3666 3774 . + 1 ID=cds.g10264.t1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . exon 3989 4150 . + . ID=g10264.t1.exon3;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . CDS 3989 4150 . + 0 ID=cds.g10264.t1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . exon 4274 4347 . + . ID=g10264.t1.exon4;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . CDS 4274 4347 . + 0 ID=cds.g10264.t1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . exon 4618 6222 . + . ID=g10264.t1.exon5;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . CDS 4618 5551 . + 1 ID=cds.g10264.t1;Parent=g10264.t1 NODE_2118_length_7637_cov_42.4385 . three_prime_UTR 5552 6222 . + . ID=g10264.t1.utr3p1;Parent=g10264.t1 #PROT g10264.t1 g10264 MSEDIIDHVNHKGMAVFSVIASVILFTCAGIFFYFSIRGTGFKYRIPHQMGQWAPEENNLSGMASSIAGLVWFGRAIVYITLANNNPIDFNIEKYRYYDYVISCPMLVLDICWVTRQPFKWTITLLTSFTLLIGAICVNVGRPETWAWFGIGCVFFSILFYWLFSGLFHSVRSYPKHLRIYLKMAMYTFIIVWPFFPILYVIGPHITGTLSIETDTYLHGFLDICAKGLYGAFLCRFRLGLEDVHNAEILGISYKTTSDDRESVAGSVAVPMGRSQGISRTNTVTLADGGPSTTTMGGLMHQSTGAHAQMQDAYAAVERDFNGNGGTMYNMQTGYSNPRFPVTAQSMGQSILRYIPDDTESNVGLGGIVPQPAEMAGLQQRNQRQQLFQQQQQQLLQQQQAEQQQYLLLQRQQQLQMQQPSPSASTIRNLTTTAAVPLVEQFATAAGGPASMQPAYFGTMGQAGAGLPTGNAATPGQPARTEDLVALLQNFGALVNGILDGLNVAQPPPPPPQQSATPSAV* # PASA_UPDATE: g10263.t1, single gene model update, valid-1, status:[pasa:asmbl_3564,status:12], valid-1 NODE_2118_length_7637_cov_42.4385 . gene 166 1810 . - . ID=g10263;Name=g10263.t1 NODE_2118_length_7637_cov_42.4385 . mRNA 166 1810 . - . ID=g10263.t1;Parent=g10263;Name=g10263.t1 NODE_2118_length_7637_cov_42.4385 . five_prime_UTR 1571 1810 . - . ID=g10263.t1.utr5p1;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . exon 1007 1810 . - . ID=g10263.t1.exon1;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . CDS 1007 1570 . - 0 ID=cds.g10263.t1;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . exon 576 652 . - . ID=g10263.t1.exon2;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . CDS 576 652 . - 0 ID=cds.g10263.t1;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . exon 394 431 . - . ID=g10263.t1.exon3;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . CDS 394 431 . - 1 ID=cds.g10263.t1;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . exon 166 242 . - . ID=g10263.t1.exon4;Parent=g10263.t1 NODE_2118_length_7637_cov_42.4385 . CDS 166 242 . - 2 ID=cds.g10263.t1;Parent=g10263.t1;3_prime_partial=true #PROT g10263.t1 g10263 MMHPNGGRPRTQSANAAATPGLSHSLSGLPQSPSMSRTPGDLSSAARPSPLKESIVVAVRVRPISPVAAPINAAAGAQSSVPVSASNFNPPLAAPPLAAAGVAGATAAQLPVGSRGRSASVSASGFSSNTADTVTATAFTAAADQCFVASSQERCVKTDDGGVIGIETNGKREKSYAFDYVAGEQSSQADVFQKVAQDVVSRCLQGYNGTIFVYGQTGSGKTHTMFGTHESEGIVPRAIDRIFEQIGKARLS # PASA_UPDATE: g10265.t1, single gene model update, valid-1, status:[pasa:asmbl_3561,status:12],[pasa:asmbl_3563,status:12], valid-1 NODE_2118_length_7637_cov_42.4385 . gene 6568 7531 . + . ID=g10265;Name=g10265.t1 NODE_2118_length_7637_cov_42.4385 . mRNA 6568 7531 . + . ID=g10265.t1;Parent=g10265;Name=g10265.t1 NODE_2118_length_7637_cov_42.4385 . five_prime_UTR 6568 6773 . + . ID=g10265.t1.utr5p1;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . exon 6568 6932 . + . ID=g10265.t1.exon1;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . CDS 6774 6932 . + 0 ID=cds.g10265.t1;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . exon 7183 7359 . + . ID=g10265.t1.exon2;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . CDS 7183 7359 . + 0 ID=cds.g10265.t1;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . exon 7475 7531 . + . ID=g10265.t1.exon3;Parent=g10265.t1 NODE_2118_length_7637_cov_42.4385 . CDS 7475 7531 . + 0 ID=cds.g10265.t1;Parent=g10265.t1 #PROT g10265.t1 g10265 MMAASIVTDFVTQYEKIWDDSGTGAVPVDVTIFRPVPPDGFYILGDYAQRGRLDAPTLHRVLCVRQEATKSHSPIPLLLPPVDYVKVWEDIGSKPKFGPCSIWKPIPPEGYVHVMRFAFSKYKSHYHRVI* # ORIGINAL: g8930.t1 original gene structure, not modified by PASA NODE_3158_length_4153_cov_41.3524 AUGUSTUS gene 412 1595 . - . ID=g8930;Name=g8930.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS mRNA 412 1595 . - . ID=g8930.t1;Parent=g8930;Name=g8930.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS exon 617 1595 . - . ID=g8930.t1.exon1;Parent=g8930.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS CDS 617 1595 . - 0 ID=cds.g8930.t1;Parent=g8930.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS exon 412 526 . - . ID=g8930.t1.exon2;Parent=g8930.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS CDS 412 526 . - 2 ID=cds.g8930.t1;Parent=g8930.t1 #PROT g8930.t1 g8930 MGGGSLQLVSVGEDDDYFTKMPEITFFKATYKRYTNFAIDQVGLPLTNPDFGRTVSLKFPNTSGDLIHKLYVEIKIPQTELMDKHGDQIAFRWIERLGHFIIDYADIYIDGNLIDHQTGDWMNVWSELSNEKKDADCYKRMIGDMPELTTTFEYSKKEFLLCIPLGFWFCKLPCSALPLIALIHSAVELKIKFADLIDCIQLESGTWRDVYDGKPTFSTGVLQAEFVILDTECRRKFATRPHEYLIETVQTSGDERIKSQRTKIVIDQFSGSCKELIWTIRRDIDDETNNWNCYGVSDVTDPSVLVNPMVDCEIRFGGNIRVPVRDEEWHPSGSANFSQLKEVSLVMNLARSDIAENENDPNAG # ORIGINAL: g8931.t1 original gene structure, not modified by PASA NODE_3158_length_4153_cov_41.3524 AUGUSTUS gene 2002 3336 . + . ID=g8931;Name=g8931.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS mRNA 2002 3336 . + . ID=g8931.t1;Parent=g8931;Name=g8931.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS exon 2002 3336 . + . ID=g8931.t1.exon1;Parent=g8931.t1 NODE_3158_length_4153_cov_41.3524 AUGUSTUS CDS 2002 3336 . + 0 ID=cds.g8931.t1;Parent=g8931.t1 #PROT g8931.t1 g8931 MGKLTAGKKGVGKKAGGGKVTTLDARHKEKLISMTETSNSLPAKKAELASAEKRLAELRKTELKQIRDTFQVEAWVARQQIDLLNVIRDIKSEIEVIEVGKNESEYFALVGDTLLKYYGDDSHVDESVGVIDACDACDITSTTCNSDDDDDDDDDSEISIVIETKKANPVPLFKFLAANGFQSFMKAGGAASLNSKASILSEYLDKIDCKPGIKVGKLTTSRGGGHSPTSECPECNVELMVVPGEGRNICPNCGFTETYILDNERTAKNNSVHETAYFAYKRINHFNEILNQFQAKESTEIPKEVYDAILRETRKEKITDLKKITKGILRGYLKRLGYARYYEHIPHIINKINGEPAPILTREMEEELRARFKALQKPWERHKSKTRRNFMAYNYVCHKLFQLLGCKHFLSHFPLLKNRGKLYDHEVLWKKICQDLGWPFYRSI* # ORIGINAL: g10478.t1 original gene structure, not modified by PASA NODE_2267_length_6971_cov_35.1817 AUGUSTUS gene 77 6767 . + . ID=g10478;Name=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS mRNA 77 6767 . + . ID=g10478.t1;Parent=g10478;Name=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 77 509 . + . ID=g10478.t1.exon1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 77 509 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 803 1045 . + . ID=g10478.t1.exon2;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 803 1045 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 1259 1411 . + . ID=g10478.t1.exon3;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 1259 1411 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 1598 1742 . + . ID=g10478.t1.exon4;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 1598 1742 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 1968 2095 . + . ID=g10478.t1.exon5;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 1968 2095 . + 1 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 2480 2587 . + . ID=g10478.t1.exon6;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 2480 2587 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 3217 3633 . + . ID=g10478.t1.exon7;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 3217 3633 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 3817 3953 . + . ID=g10478.t1.exon8;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 3817 3953 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 4245 4346 . + . ID=g10478.t1.exon9;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 4245 4346 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 4585 4668 . + . ID=g10478.t1.exon10;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 4585 4668 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 4824 4902 . + . ID=g10478.t1.exon11;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 4824 4902 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 5109 5208 . + . ID=g10478.t1.exon12;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 5109 5208 . + 2 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 5437 5488 . + . ID=g10478.t1.exon13;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 5437 5488 . + 1 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 5670 5812 . + . ID=g10478.t1.exon14;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 5670 5812 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 6048 6084 . + . ID=g10478.t1.exon15;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 6048 6084 . + 1 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 6258 6353 . + . ID=g10478.t1.exon16;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 6258 6353 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS exon 6699 6767 . + . ID=g10478.t1.exon17;Parent=g10478.t1 NODE_2267_length_6971_cov_35.1817 AUGUSTUS CDS 6699 6767 . + 0 ID=cds.g10478.t1;Parent=g10478.t1 #PROT g10478.t1 g10478 AAFSSAAKRYDTIESNTLNLVAISAINTAVTDPRGIILFKPALDEGSVAGAVYASITIRLSDTLAQNASSDAFVRIVVNPVNDAPLGVVGTVNVPLGADNTPGAVLVTLNTTDPDTNFSPRPFVRITKPPKYGVLYQAKDVTENGVTKTIAGDLVPPDVYIPTVFGYASRVRNVSSQFSICGQLCSIRPLDCIEGRIQSLIGDCTKNAWHATQILGPPDVYPRYGDIKENWEPLLDRGTEFIELEFAIDMYINGISIYETFKAGSVVRVSAATEYTGMTTQWSVLWAGAPEIQPEKSRIFAPPLCHYPFKARFVRIDMNTIAVPGWNSIDAVQLTGTLSLPVGSVTDARSRVVYVPIRGILPASTAASAAFDSFGYRVSDCEAESPQEASVTLRTATDATVGRAAVPTSYINASSLTLKFVSISTQLSSFVIRPVTAATLRAIGIPSATVDALALPADASFNTAMQQVVALIDDLYATSGSSVSARTSLGVLSSVAAIAPGDALPPSAPGLLVLAAGRVSVVTSMSALGVTYTTQLDIAANAGGVSSSSSSNKFVIPVAVVIPSTVVLAIIIAFVVRERRLKTEMEKKSMTWMITYSELEVLEKIGEGNWGVCYRGRFRGSEVAIKMLKLVGQPQLQRALNDESILKETLATRMRTGSKASSFLARFAGGSRTSWKSGSGTQEANNAVSSFLQEIQIMCTLRHPNITMFMGACVDKNLCMVMELMANGSLSDLYSDRSKDLPWSQRFSLMADAARGMLYLHSFKPTAILHRDFKSPNVLLDSHWRAKVADFGLTVLKSNNKNALEKDTGDNAAGSPIWMSPEALRQETVTEKCDIYSFGGF* # ORIGINAL: g7564.t1 original gene structure, not modified by PASA NODE_291_length_27886_cov_40.7772 AUGUSTUS gene 56 3074 . + . ID=g7564;Name=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS mRNA 56 3074 . + . ID=g7564.t1;Parent=g7564;Name=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 56 815 . + . ID=g7564.t1.exon1;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 56 815 . + 1 ID=cds.g7564.t1;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 929 1042 . + . ID=g7564.t1.exon2;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 929 1042 . + 0 ID=cds.g7564.t1;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 1322 1591 . + . ID=g7564.t1.exon3;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 1322 1591 . + 0 ID=cds.g7564.t1;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 1962 3074 . + . ID=g7564.t1.exon4;Parent=g7564.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 1962 3074 . + 0 ID=cds.g7564.t1;Parent=g7564.t1 #PROT g7564.t1 g7564 HHGLVSSVTVIVPALWPGAVLVDIPGVSMADKYLYAISNAALKQSCDIAVVIVGKGPIDSDVKTALTDGGFLRRLAEPEEWRDERGRKAPAVINLIPIDKIVEVDDQDIDVVTEFELEQNEEKQDHWLEMTGEYSRSVEEVDGERRNLQMRVQGQMMQRIHFLAANTRSNAVEGYGIARVTNAIKTIMDERQADLLVKLRKDIVEVAASIVTLHRDLENLMRAAENPAILQVMHNKAKLKSLIKCARETADTEFRTRGDGVGASRDALKGSYETKCSRERFWAELNETKGKTNSYLKERNHTLGHDLKQDPMAVSQLRVLMIGPLLTGLPVTLTEAAESSAARALDAIVERIPLDMTALFVANPQSEAGDHLAQMLLDIEKHKFQCNMKILQQSQMKLLRNTIRRTTTEAIAASVTKHLKPLAKIALTYRSNALRLEFLANETSRLAGLVVVDVIGKVQSAIEKWRLKAVGEVACAVRNVQDRFRSYDEDSVADLRAVGVLKDVPRIAPSVARLMHDAMEGLPATENNELWPFESESIKKSYIALVREHAAQLEGRQLRSTPARRKESTRLFTRTPQSRRTKRAGSHSDDNDDSDSDGSVSDTSNGGGAPDAAGPPSAKRRRLEASLDTVAEGRRAHCPMETDAECTPMAGGAIAGDVNDVDMDGKDDTRQRVPSAAGTARPRRAGDWECNNCKQNRSDKHRRPGPTGKATLCNPCGLYWRNHKRDRPLLLIEREKQREQNQMQINGASNN* # ORIGINAL: g7567.t1 original gene structure, not modified by PASA NODE_291_length_27886_cov_40.7772 AUGUSTUS gene 13927 19271 . - . ID=g7567;Name=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS mRNA 13927 19271 . - . ID=g7567.t1;Parent=g7567;Name=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 18854 19271 . - . ID=g7567.t1.exon1;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 18854 19271 . - 0 ID=cds.g7567.t1;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 18544 18677 . - . ID=g7567.t1.exon2;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 18544 18677 . - 2 ID=cds.g7567.t1;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 14364 18407 . - . ID=g7567.t1.exon3;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 14364 18407 . - 0 ID=cds.g7567.t1;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 13927 14127 . - . ID=g7567.t1.exon4;Parent=g7567.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 13927 14127 . - 0 ID=cds.g7567.t1;Parent=g7567.t1 #PROT g7567.t1 g7567 MHSSTHAAGGLGGADAPVRPSPRDTEDDLLRFQESFLAGGGASAVKVIRRKPPQTIASDSNNDSNANSASNPNSASSVPQTNAQTTDAPSVVEATRESNPSASDGSTADAPPKKSRFAAQRQSKRDGSQSTANGKAGGRSEDTQVAAVMSAIVERDVVTFEAPQPPKARADAFPEVIKFEDRSLPRPDGTATAAPEQPKKTRKSAFAAQFDLDHPDVAARIPQPTQSGNSTPSTPVMATPTTAVSAGIKLREKEGLDDENKRRLTQMSAQDIEDARAEIFARLDPAVIAALRKRGDSGGAGKTGSRSGASGSESGGGRRGAGSRDVTADDGTAVDDDVLGGRVSAAQEPASKRVSFMPDGVTSVAATSSPPYDGSSHVTAESTATALTLPDMEGVENERAKRAWMEVPADVKHPTDSPSDDALTSQAKILLGPLAGVAQMRFDFGGCVIGDGADIPSHVGLHHHGSEPDKAGYTIGELFMLARSEFTAQRAFAIRTLGRVAGRARLCAYALHDYPATLAEDSTLSRLVGGGRAIVSLAVLQALTELHFARLLRCALDDASDTVVAVAAAAFSAYLCPPGDEEELDETSHCYRMHECPSLRPIAAPTDPFGPVTPPQVNDDGEGGEAPESDADAVARDVVGGFIRMDVIGRLRFVLDVCKIHTAVEPCLSVLVRIARHSAQAAREVAQCPGLVDVVTAMFVRPPVFVAGEDDRYARPRVSAVRLLTILCAADAATCEQLVKLGGVPDAILKLGVHSAGPKDASGADGERTRAILGALSLRKAALQLWRVCLSYGRCTAMIADAFHPLASELQGVCAARELLPQHEHADLHAAECTYFDAVASLFAAFEAAAFVAADPRLRGQPLTPSHLDGLCELAIIFWRNATAQLDVPRFVSAVKCTCAAGERDGRSFRALACAASSALRFVRAHRRALASVNAPVTGGVSFVTLAETLRAALQGGERLDRVQRLVTFCASAHASDESDASGGDAVLCIAHGVVKSTPTAGAVSRAVGRADLPNLPSLVVGADFLPALPWVCDYVLAHVQLCNQLALESKDARALFAFVPQLAAVAAFLESIMRDDSGVCEHVGDARGPSVDVEKNTNRSRHFRRGESYLASEYLDMLRDRDRNTRDAPTNSVQMSATMDSNNTAGGDIDDDRAEEAARLRVRLCQGVSLALLGRLLPGDEYIARRLLSECTLNPAIDSLDATGRLVDYTRVRSVIAEPCLGAIGGKASVALSRALSVGVPSETKTLSLSAPHDTKSVASLPLPPDWLLAPLADEHQRVLAPQLHVAPSADPDDGDDPLAVVRCTVGLVADIMRWQGLHASRISPSSLFERIVKAYYVGDVAWMEDKTAAHMGRILSAIAANDTFNFPPAFYDAYVDLIAHYESSSFGNRTFGAWISLPLRMRHGRALRVGAWREHVTVFRVLPLTPADLPSPTAAWLLPRETDEEVLVGMASALSVGRVQPTWSPFFYDVARHHVAAALFGDYPAGLRGSGDPDVRGEREGQVQSHADQRAPSGGTAAKLLRVIIAGNNEVAYRCIFDCFPSDVGLAAEAPTHRASTVGDRLLSSRVALEACADLPRDARRAAMSALDALHARAFK* # PASA_UPDATE: g7569.t1, single gene model update, valid-1, status:[pasa:asmbl_5236,status:3], valid-1 NODE_291_length_27886_cov_40.7772 . gene 20805 24932 . - . ID=g7569;Name=g7569.t1 NODE_291_length_27886_cov_40.7772 . mRNA 20805 24932 . - . ID=g7569.t1;Parent=g7569;Name=g7569.t1 NODE_291_length_27886_cov_40.7772 . five_prime_UTR 24782 24932 . - . ID=g7569.t1.utr5p1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 24726 24932 . - . ID=g7569.t1.exon1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 24726 24781 . - 0 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 24316 24458 . - . ID=g7569.t1.exon2;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 24316 24458 . - 1 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 23959 24143 . - . ID=g7569.t1.exon3;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 23959 24143 . - 2 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 23403 23564 . - . ID=g7569.t1.exon4;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 23403 23564 . - 0 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 22891 22980 . - . ID=g7569.t1.exon5;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 22891 22980 . - 0 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 22378 22558 . - . ID=g7569.t1.exon6;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 22378 22558 . - 0 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 21952 22067 . - . ID=g7569.t1.exon7;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 21952 22067 . - 2 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 21431 21671 . - . ID=g7569.t1.exon8;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 21431 21671 . - 0 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . exon 20805 21320 . - . ID=g7569.t1.exon9;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . CDS 21112 21320 . - 2 ID=cds.g7569.t1;Parent=g7569.t1 NODE_291_length_27886_cov_40.7772 . three_prime_UTR 20805 21111 . - . ID=g7569.t1.utr3p1;Parent=g7569.t1 #PROT g7569.t1 g7569 MFRSLALGGRRAASLLQRGANSACISAKHMSTQPVPASSQFPTRYPPVIRPGLDYVLYPELSPAVEDFEPEKHISNFTVNFGPQHPAAHGVLRLVLELKGEVVKRADPHVGLLHRGTEKLIEYKTYSQALPYFDRLDYVSMMVNEQAYSLAVEKLLNIKVPLRGQYIRVLFAEITRILNHIMAVTTHALDVGALTPFLWLFEEREKMMEFYERVSGARMHAAYVRPGGVSLDMPIGLMEDIYQFIQQFSARIDEAEELLTSNRIWKQRLVDIGVVTAQQAMDWGFSGPMLRASGIPWDVRKTQPYDVYDRVEFDVPVGRNGDCYDRYLIRCEEMRQSLRIIHQCLNDMPEGEVRVDDNKITPPRRAEMKDSMEALIHHFKLYTEGYAVPAGATYTSVEAPKGEFGVYLVSDGTTKPYRCKIRAPGFAHLAGLDTMVRGHMVADVVAIIGTQDIVFGEVDR* # ORIGINAL: g7568.t1 original gene structure, not modified by PASA NODE_291_length_27886_cov_40.7772 AUGUSTUS gene 19706 20335 . + . ID=g7568;Name=g7568.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS mRNA 19706 20335 . + . ID=g7568.t1;Parent=g7568;Name=g7568.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 19706 19925 . + . ID=g7568.t1.exon1;Parent=g7568.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 19706 19925 . + 0 ID=cds.g7568.t1;Parent=g7568.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 20121 20335 . + . ID=g7568.t1.exon2;Parent=g7568.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 20121 20335 . + 2 ID=cds.g7568.t1;Parent=g7568.t1 #PROT g7568.t1 g7568 MSGDTATAATQAEGITAKSNNDGASSSPAGDADVFSAGLMSLLAPVVNEMDAGVQAVVESQSALHHQLDLLARELRKFFDLANPPADLEAYIKKLIIARKRIDSVASIVRDVQERSEKLQTNVARDLKRRADAQAKIAASPQRS* # ORIGINAL: g7565.t1 original gene structure, not modified by PASA NODE_291_length_27886_cov_40.7772 AUGUSTUS gene 3805 10527 . - . ID=g7565;Name=g7565.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS mRNA 3805 10527 . - . ID=g7565.t1;Parent=g7565;Name=g7565.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 3805 10527 . - . ID=g7565.t1.exon1;Parent=g7565.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 3805 10527 . - 0 ID=cds.g7565.t1;Parent=g7565.t1 #PROT g7565.t1 g7565 MVPYDKWRCTGAVALVAPRWLEGAGATAMRFRTPTTPILVENILAIASSVSRMNATLEGEHLVSLRNAFLEAIGPTGSLDARLSQEKWLYAPSLGKMIAPIRLVFQLPDAAQHGFEPFRVLADRDIARFKIPLLNMGAKEKLDARDLVEVLKEMRDGGILDAKKAARVLEALKDVWDDKRDGALKKDVLLPRTGGELVPASSLSVRDWGDLSFTAHNAASVVDDAVHPRAAYMFGASSLRSVASELAVVPFEQYESMPTRIKGILEDYPSSALPREFLQNADDAGATRLDIILDMRTFKSDCLVSAELGAFQGPALVFFNDASFREEDFQGIKSLGMGSKGTSNESAGQFGVGFCSAFHVSDCPVIASAGYLCVLDPRRRYLPGQHGLRPGGLRYNASLLKKQGFSDHVTPFCEYIGRDLSQGTAFRLPLRTMDQAKGNELGRGAPAHDITGVRGLLGKCAEKAEELLLFTRNVHAIRVGVRDDGGLTVLCDVKKDLRARANGAHVISIAQTLKERKEALCDDDTIDYSATYVVGITSIRDEQHQRGEWVVAERIVPRPAHIQPPPLKKPCVAVALPIVCNKPNVAVRKTLYAIMPLDEDESAGIPASISATFHLTTNRRVQSGNQPHNQWLLSQLIPDAYCTALLALREEVAAVKTPAATARQLYNSLPVVSSEMKKAGITNAIQIAESTIRRIVNQDIAIFLDRNATWQDAKSAIFFSDVPEGVAFVLSQEGHPLCDTLGIARVAGIADVCKGDVRMLTPELCIDILRDLDIAVPGGAPLAIPVRNHPGFAEVDKIEDTLKYCLSAHNVGNNPGQIIGLPLLVVAEGRALLAFGPRAQDDNVIVAVQQKDRDILRKCERLPSVATCTSISKHLAPSTFHKLGLALLDFKGLLSSVKHVLTARGIQPDSGVGPCPQEWLTWHFSVMAYMRQHGPKKDEWIEVMRWPLIPGWTADGGLRVYAARKDPVIVIVNRATEVGLEAANVISSLGCPVWPPPNDPKALPQHGQIQGRFVAVEESAVSPTSIEGRACASHIVRIAAFAKGSDDALVALVEAMNSETRRHLSVVLSRQATNDKAGPALLRRLAIYPQLDTSRPLCAIDKGRWVAPENPSEWETVGHVFTDGVLAPTPQLVGLYSAAKVECMTVGTFLVMGVIPHFPEMSDVDICRAMSAMRTLVTRGVKGAPTSARLCQLEFIRDSAGQLRSASYFVTVGTTAKGTKIYEDIHPSERIPTTSPFSSSDWTAFLVSHCGLRNDLTISMFLKCASVVAERQDRKLAVRMWQSSGTWRESVDKQKWALIAKIHALPMDENPQGKLGVAFRPRLCAAQTLCAPEEAATSDSATHLWSQVATPHPQICPLPPTLTQFMMSKTTALVARHLLFLAESSASRPTGDESFWSTLHDKVFEVYGELRDAVKCGRAIELACLRGQPVLAVAGAAGADAQGGLRFFRGDQLFKELPCDEVPPFFLKLPNELLEYWEFARVCGVEERPSVESSLGILSRIAARAAGKPLNGKEIDAVRAALEMACECKTAGVHAPAAAGPVAPGGISLPDTKSVMRPSRELLLDDAGLLDDGGAAASAAANNEDVQHSVLVHATIRACLLQKGMRDVVSRLGVGLTSARESRTLVQPDVSEAIALTKDAFAANADETLRSRVFACAAAASVRGKGRNLKSVIQTLAGIRLAIVDAITLESSNGRQLFVQRHTTSVDGSPVVLVVANNAPSMALAIAKEVVGLCDGDVATANTDGLVIGLQAGPDALDAYLRTQGEPVGETASALGQPLSPEEAEGVQIDVRIFNVGEVVAWERVSEEDSASNELIWVKVLGAVSTDRDTDALSACFHIQWGSTDDDHAQVPACQLYGVDRMGASVPSSRDCGTAASSEQGVDESDATPTPTAGTGDGSPFLEAPVGSREGKTPPNSSDASSSAQDSHARLLELLVAVLDGVDNGLSKIVNHNGQAVQKLFRQLMLQFHPDKKNGERRYHTAAALLTSEKARHKEGKWRMRTQEQRCERALEFAGPDGQRASSSASSASNDHGSDAPRSSRRSTDDEWRREWFGRNTYQSRHEQSYFRGSRDNDFDFDASGSTYVPPQRVPSEAMALTLRLAARDDLDAARVLSAACTNPRDAGATSGGGYALHAHVCFSAQQSVDKAVKAVVAFTVGIRVGEITSDDTNALLKHLCTRKELFVALRDACAPIAGYFTNARHVGADRPSASLSEAHAAIALRAAERMLRIADDILFPSDS* # ORIGINAL: g7566.t1 original gene structure, not modified by PASA NODE_291_length_27886_cov_40.7772 AUGUSTUS gene 10682 12640 . - . ID=g7566;Name=g7566.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS mRNA 10682 12640 . - . ID=g7566.t1;Parent=g7566;Name=g7566.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS exon 10682 12640 . - . ID=g7566.t1.exon1;Parent=g7566.t1 NODE_291_length_27886_cov_40.7772 AUGUSTUS CDS 10682 12640 . - 0 ID=cds.g7566.t1;Parent=g7566.t1 #PROT g7566.t1 g7566 MPVDFAQSVDIGDRIRELLGEYRPGQLVNELLQNADDAGAKILVIAIDKRWFGRQSIRNASLAQMQGPAVLAYNSAAFKEADFKNICRVGGATKKQDAETTGRYGLGFNTNYHITATPQLLSGTKFAVFDAGRTCPELKGGQMHDFLIEKTDVVAEELEPLTAGLASVTGEEWNGAIPPLRVSSQYSGTLFRFPLRTIPDELVSAGRLHTPNQILETIVNSVRDAKPTLFLTSVLELAVYEIDESGRATLHFRQRVDRADDAARQAQCIARMYLPVNVCGELVLHTTYTNGSNERSNWIIAATMHDPNKVDGRKLLASAAARMDVGEHAASKHLVYSTLPVPNVVNPLPFHVNAQFALSSDRRNIDRYDEWNQRVAKTALPRVALNLIKATVKTVMSTMGLTSDDPVALAADVYRLWPLISEWDVLPDFVPQLFKLAATESILWSYQTRGLVSPSKAHVLSDTCFGEARAGLMHSLAQCYRALTADDIIAVVPATIARRFNPSKTEQQKKEREFVARAIAGCYDALCARDPARADEAIEVALTHFDMLVEASADFAAKLRQVPFITCGTKGERRRPSEVLADSSPLWDALPHDSIRKPTGLFAQNTPMGRALQSTKLLAVQPTDEMLLEAAVLVQRDAAACTATSSEIQARA* # PASA_UPDATE: g7570.t1, single gene model update, valid-1, status:[pasa:asmbl_5237,status:12], valid-1 NODE_291_length_27886_cov_40.7772 . gene 25986 27780 . - . ID=g7570;Name=g7570.t1 NODE_291_length_27886_cov_40.7772 . mRNA 25986 27780 . - . ID=g7570.t1;Parent=g7570;Name=g7570.t1 NODE_291_length_27886_cov_40.7772 . exon 27440 27780 . - . ID=g7570.t1.exon1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . CDS 27440 27780 . - 0 ID=cds.g7570.t1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . exon 27116 27185 . - . ID=g7570.t1.exon2;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . CDS 27116 27185 . - 1 ID=cds.g7570.t1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . exon 26791 26893 . - . ID=g7570.t1.exon3;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . CDS 26791 26893 . - 0 ID=cds.g7570.t1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . exon 26354 26472 . - . ID=g7570.t1.exon4;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . CDS 26354 26472 . - 2 ID=cds.g7570.t1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . exon 25986 26103 . - . ID=g7570.t1.exon5;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . CDS 25999 26103 . - 0 ID=cds.g7570.t1;Parent=g7570.t1 NODE_291_length_27886_cov_40.7772 . three_prime_UTR 25986 25998 . - . ID=g7570.t1.utr3p1;Parent=g7570.t1 #PROT g7570.t1 g7570 MDVWYLNGYVAVYQFIFGLPYAPLAAVMTDLKISDIPSNLWDGARCLFTGENFIVPSYLNATALILTNSSCLTMDPNCAGSNTCCDSCDGSYSAVSGVSALTGMILYMCANIAYNIVLVLVIKHGSAALMYVASTVVLPLGAASFTIKAFLGQHATSFTVYDGCGLGVVLLGLVIYRFLGSRGNKGDDQVTALGGINQLEVVVRSHQTYAKEEFKPRSRSRIRNDFYQRLGVRDIPINNTPYTGI* # ORIGINAL: g11023.t1 original gene structure, not modified by PASA NODE_2301_length_6804_cov_39.5674 AUGUSTUS gene 121 3925 . + . ID=g11023;Name=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS mRNA 121 3925 . + . ID=g11023.t1;Parent=g11023;Name=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 121 195 . + . ID=g11023.t1.exon1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 121 195 . + 0 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 636 764 . + . ID=g11023.t1.exon2;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 636 764 . + 0 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 1055 1792 . + . ID=g11023.t1.exon3;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 1055 1792 . + 0 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 2008 2171 . + . ID=g11023.t1.exon4;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 2008 2171 . + 0 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 2602 2749 . + . ID=g11023.t1.exon5;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 2602 2749 . + 1 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 2979 3046 . + . ID=g11023.t1.exon6;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 2979 3046 . + 0 ID=cds.g11023.t1;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 3742 3925 . + . ID=g11023.t1.exon7;Parent=g11023.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 3742 3925 . + 1 ID=cds.g11023.t1;Parent=g11023.t1 #PROT g11023.t1 g11023 ARAERLKEGTMHRDEVVRMRRDYEEANELGDLVVEQMKIESDSQLRIERDKIAALERELDAIKKSNSFNGSNGEVSAAANRAALSQALSETHRLQSELEVAERRLAEAKSDVETERARSAEAQVRTEEAASAASSMAAAGALERDALREEIRRLRDENALLRAREKDSDTLASEVADLRALSARQRVRCEELEITSTAHRQTMLGLEERNASLQRQVRELQQQLLELSASASGRSAHAPPSSSASSVSSAPLSPAATQRVVAPAPSSSTTVPLSAAKSPAGAAEPTPSPSSPSSQNAARKTSEQRNMLSMEAWKAIIDKHTEEIAGGIQSLFVSAKAGDRSQFLPSATLVNNAAAEITGAFDRSPHQDKFRPAVGMLSSNAYRLVQVSTAAEARGVQTVIMAAYDTAKAAKALVQLTEAPDARCTEEGRTGRAFDCVKTRSIHDGDVGGLPGWAVAELKGAIKDVLKEALASDPAAGYKSETDVRYSLHVGKCIQVYVLWV* # ORIGINAL: g11024.t1 original gene structure, not modified by PASA NODE_2301_length_6804_cov_39.5674 AUGUSTUS gene 3928 5430 . - . ID=g11024;Name=g11024.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS mRNA 3928 5430 . - . ID=g11024.t1;Parent=g11024;Name=g11024.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS exon 3928 5430 . - . ID=g11024.t1.exon1;Parent=g11024.t1 NODE_2301_length_6804_cov_39.5674 AUGUSTUS CDS 3928 5430 . - 0 ID=cds.g11024.t1;Parent=g11024.t1 #PROT g11024.t1 g11024 MASFSSLPIEVVVSHVAPLLCNKDFASLAGVSSQLRNGLRLRRTFRLRYAFSKRYWESAEFRNAVWADIPRERLKLNLNGVRSVCGDLSVLGGIHTLNVSNCNNVTDVSALADVHSLNISNCYNVTDVSALGGVHSLDLSHCFDVADVSALGGVHSLNLFNCNGVTDVSALGGVHTLYLSSNGVTDVSALGGVHTLEFSNRNGVMDVSALGGVHTLKLSGCMVTNVSAFSSVHSLNLSLCVGFTDMSALGRVHSLRISDNSDVTDVSALGGVHSLYITFCQGVVDVSALGRVHTLYLINCGGVVDVSALGRVHTLSLWFCHRVTDVSTLGGVHSLDLTKCAGVTDVSALGHVHTLNLSRCYGVTDVSELGGVHSLNLTQCAGVTDVSAFGGVHTLKLSYCKKVTDVSALGGVHSLNLSYCEKVTDVSALAGVHSLNLSLCDGVTDVSALGVVHTLDLSYCSGVMDVSALGDVHTLDLSKCRGVTDMSALGGVHTLILFRI* # ORIGINAL: g2798.t1 original gene structure, not modified by PASA NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS gene 186 833 . - . ID=g2798;Name=g2798.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS mRNA 186 833 . - . ID=g2798.t1;Parent=g2798;Name=g2798.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS exon 186 833 . - . ID=g2798.t1.exon1;Parent=g2798.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS CDS 186 833 . - 0 ID=cds.g2798.t1;Parent=g2798.t1 #PROT g2798.t1 g2798 MSQSCEVCTMIAATEHGKNKKKFKITGVDAEGLSLLAWGLSIMSVTSLPSKIADALHAQPVRHPLYADTVRARLLGVGTSATVCEVRRATGAAPYCIKTVRNPYSAQFKNELAALQVLQRAPRASFPTLVYDSKTRRLLTTPVAKPLFPAADSGQCLGFAAYVPLVEDLKAIKHHVFHRDVAPHNLAWYQDGNMKKVLLIDFVGAPSSSGMRISS* # ORIGINAL: g2797.t1 original gene structure, not modified by PASA NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS gene 1 141 . - . ID=g2797;Name=g2797.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS mRNA 1 141 . - . ID=g2797.t1;Parent=g2797;Name=g2797.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS exon 1 141 . - . ID=g2797.t1.exon1;Parent=g2797.t1 NODE_5398_length_871_cov_42.8178_potentialcontaminant AUGUSTUS CDS 1 141 . - 0 ID=cds.g2797.t1;Parent=g2797.t1 #PROT g2797.t1 g2797 MWYASTSALEQLIEYDDAAADDDDDNHYNKAKSRNAWMGTVNVNASF # PASA_UPDATE: g2736.t1, single gene model update, valid-1, status:[pasa:asmbl_7870,status:12], valid-1 NODE_5107_length_1017_cov_36.7166_potentialcontaminant . gene 1 1017 . - . ID=g2736;Name=g2736.t1 NODE_5107_length_1017_cov_36.7166_potentialcontaminant . mRNA 1 1017 . - . ID=g2736.t1;Parent=g2736;Name=g2736.t1 NODE_5107_length_1017_cov_36.7166_potentialcontaminant . exon 1 1017 . - . ID=g2736.t1.exon1;Parent=g2736.t1 NODE_5107_length_1017_cov_36.7166_potentialcontaminant . CDS 1 1017 . - 0 ID=cds.g2736.t1;Parent=g2736.t1;5_prime_partial=true;3_prime_partial=true #PROT g2736.t1 g2736 ATDVALARTAALVALIDATDLTDAANSAALTVKAAALVATDAALLTDADTCATLAVTAAALVATDAARLNDADICATLAVTAAALVATDAALLTDADTCATLAVTSAILVATAFADAASSAALTVTAAALVATDAALLTDADTCATLAVTSAILVATDFADAANSAALTVTAAALVATDAALLTDADTCATLAVTAAALVATDAALLTDADTCATLAVTAAALVATDAALLTDADTCATLAVTSAMLVATAFADAANSAALTVTAAALVAKDAALLTDADTCATLAVTSAILVATDFADAANSAALTVTAAALVATDAALLTDADTCATLAVTSAILVA # ORIGINAL: g2887.t1 original gene structure, not modified by PASA NODE_13144_length_263_cov_0.792553_potentialcontaminant AUGUSTUS gene 2 263 . + . ID=g2887;Name=g2887.t1 NODE_13144_length_263_cov_0.792553_potentialcontaminant AUGUSTUS mRNA 2 263 . + . ID=g2887.t1;Parent=g2887;Name=g2887.t1 NODE_13144_length_263_cov_0.792553_potentialcontaminant AUGUSTUS exon 2 263 . + . ID=g2887.t1.exon1;Parent=g2887.t1 NODE_13144_length_263_cov_0.792553_potentialcontaminant AUGUSTUS CDS 2 263 . + 0 ID=cds.g2887.t1;Parent=g2887.t1 #PROT g2887.t1 g2887 LIKQTSDHPEPNSKVNVAHWNFLALAACILVPKSDAILELLRMHLKRAALEQGSEEGKIASFTQKVLSRTVENKNRKYPPSRQEIMC # PASA_UPDATE: g124.t1, single gene model update, valid-1, status:[pasa:asmbl_7304,status:12], valid-1 NODE_4426_length_1634_cov_27.365 . gene 48 1534 . - . ID=g124;Name=g124.t1 NODE_4426_length_1634_cov_27.365 . mRNA 48 1534 . - . ID=g124.t1;Parent=g124;Name=g124.t1 NODE_4426_length_1634_cov_27.365 . five_prime_UTR 1495 1534 . - . ID=g124.t1.utr5p1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . exon 1492 1534 . - . ID=g124.t1.exon1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . CDS 1492 1494 . - 0 ID=cds.g124.t1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . exon 1187 1313 . - . ID=g124.t1.exon2;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . CDS 1187 1313 . - 0 ID=cds.g124.t1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . exon 852 990 . - . ID=g124.t1.exon3;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . CDS 852 990 . - 2 ID=cds.g124.t1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . exon 524 627 . - . ID=g124.t1.exon4;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . CDS 524 627 . - 1 ID=cds.g124.t1;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . exon 48 153 . - . ID=g124.t1.exon5;Parent=g124.t1 NODE_4426_length_1634_cov_27.365 . CDS 48 153 . - 2 ID=cds.g124.t1;Parent=g124.t1;3_prime_partial=true #PROT g124.t1 g124 MFDKLLLLVAGRLVYLGKPMEAIPYFEKFGFPYDSAMNPADYLISVTGPGTGHGTRLVDGPEVASGFFAEEYVKSTLAEAGLVSAMDAARHRGDPKETKLREEAPSFVTSFAFSTRVMLRRSFKMHLREPTFLSTRIYQNVLTALIMLSIYYNLGTDAT # ORIGINAL: g3329.t1 original gene structure, not modified by PASA NODE_193_length_32659_cov_40.2591 AUGUSTUS gene 22206 25277 . - . ID=g3329;Name=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS mRNA 22206 25277 . - . ID=g3329.t1;Parent=g3329;Name=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 25161 25277 . - . ID=g3329.t1.exon1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 25161 25277 . - 0 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 24801 24955 . - . ID=g3329.t1.exon2;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 24801 24955 . - 0 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 24340 24444 . - . ID=g3329.t1.exon3;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 24340 24444 . - 1 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 23733 23914 . - . ID=g3329.t1.exon4;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 23733 23914 . - 1 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 23441 23557 . - . ID=g3329.t1.exon5;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 23441 23557 . - 2 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 22874 23334 . - . ID=g3329.t1.exon6;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 22874 23334 . - 2 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 22554 22664 . - . ID=g3329.t1.exon7;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 22554 22664 . - 0 ID=cds.g3329.t1;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 22206 22355 . - . ID=g3329.t1.exon8;Parent=g3329.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 22206 22355 . - 0 ID=cds.g3329.t1;Parent=g3329.t1 #PROT g3329.t1 g3329 MSHANVTTPADTLDPLMLRAAILKAASKHSMFKRYSQQQDDILIQLPRFPRPTIFFRIVDMKSSLEEHDNALYERESIGLYLENGSIRFGMDECNALFKEHFLSKSRAMREYLMYIVQLQTAVVLKRTPIEIEVFLETLDVEGSDNYLEYTENTGVAFRAQDLRSFTQESGCKDGTVGVYMPGNGVVFGFEASVIAILQRWRKRLTRRKSLADMHGILPSGNDDTAALKTANAGEPNDDIPLADDEDAVSQGVGAGAGAGGAFKRDATELSVRSIKRNGSESSIRSVRKEPAGDNYQSFKRDHTEASIRSVSRTRDASENSIRSGRASGEKPPLSRRKSEELTKKILLVPTPQDCARVFGMLLSHHAPNVVGGGKATVKAREACAEFDSSFGAKLIRAPRFVGKGPDDKFENFTVEFFTERTSASRSPEFSRTIITVKKDKVSVDTRLVGQLGVKELCGAKCILL* # ORIGINAL: g3327.t1 original gene structure, not modified by PASA NODE_193_length_32659_cov_40.2591 AUGUSTUS gene 1723 6452 . - . ID=g3327;Name=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS mRNA 1723 6452 . - . ID=g3327.t1;Parent=g3327;Name=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 5891 6452 . - . ID=g3327.t1.exon1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 5891 6452 . - 0 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 5541 5662 . - . ID=g3327.t1.exon2;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 5541 5662 . - 2 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 5253 5334 . - . ID=g3327.t1.exon3;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 5253 5334 . - 0 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 4578 5110 . - . ID=g3327.t1.exon4;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 4578 5110 . - 2 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 4162 4331 . - . ID=g3327.t1.exon5;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 4162 4331 . - 0 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 3682 3812 . - . ID=g3327.t1.exon6;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 3682 3812 . - 1 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 3247 3368 . - . ID=g3327.t1.exon7;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 3247 3368 . - 2 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 2758 3007 . - . ID=g3327.t1.exon8;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 2758 3007 . - 0 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 2355 2512 . - . ID=g3327.t1.exon9;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 2355 2512 . - 2 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 2065 2167 . - . ID=g3327.t1.exon10;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 2065 2167 . - 0 ID=cds.g3327.t1;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 1723 1901 . - . ID=g3327.t1.exon11;Parent=g3327.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 1723 1901 . - 2 ID=cds.g3327.t1;Parent=g3327.t1 #PROT g3327.t1 g3327 MGCGSSKSTAVVSGAPSTAQTAAPTPATNGGGNKVAPAVAKVESAHKSATPSEPAKPNSTKDAAPKQASSGSATKVGPAPITNGAPKGVEAVKAAEANRPTTPKNAPAAGTGAAAIAARSISASSLPGTAGKGASNAALNGGSIPTVITPTTPGHGNSMIPAHAPNAATLRDFSDDGSVTGLREIEITMRSALLIQKWYRRHVAKLELRQKVNWTIFQNIEYRGEHDQMRMYEFFNHLLEHLPKSSGLKVAGGFEGSSSDVPASTPDAPAAPSKKKATIDIHTIDIESTYAGIHLPDTVGAAAALAIAESFKSRPNVPLHARYVVNILQHTRDVLKAQPNITTLSIALSSRKATIVGDLHGKLDDLMAIFSRNGYPSDDNPYLFNGDFVDRGTHSVECAVIIFAFMIAYPNAVRINRGNHEDYVMNLRYGFIKEIMAKYAEKAQIIVKLFADLFSYLPLACVIERKVLVVHGGVSDKTDFAYLSTIPRGRYKSVLKPPTKGDEGVNNDEWRQLLDLLWSDPRPENGCIANEFRGGGTYFGPDITHNLLKAHGFDLLVRSHECKQEGYEFAHSDKVVTIFSASNYYAEHSNNAAFIRIDGSLKPNFVRFNALEMRKQGSMRESVETLEKSALSEMQNLICEHSDELLPAFKKLDPRNEGFIKISDWAHVLESVLKITLPWRKLAETMSLQDSGRVNYADLLAQFKVQYSTKSDGKGGVNEELSGVVYKHRNQLEMIFRIIDTDNSGFISMDEFETACEVLNKYLPHPIPKEQMKQLALGMDLNGDGKICFDEFLECFRLVQKAV* # PASA_UPDATE: g3331.t1, single gene model update, valid-1, status:[pasa:asmbl_3064,status:12], valid-1 # PASA_UPDATE: g3331.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_3065,status:12], valid-1 NODE_193_length_32659_cov_40.2591 . gene 28894 32496 . - . ID=g3331;Name=g3331.t1 NODE_193_length_32659_cov_40.2591 . mRNA 28894 32496 . - . ID=g3331.t1;Parent=g3331;Name=g3331.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 32447 32496 . - . ID=g3331.t1.utr5p1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 32169 32223 . - . ID=g3331.t1.utr5p2;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 32447 32496 . - . ID=g3331.t1.exon1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 32074 32223 . - . ID=g3331.t1.exon2;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 32074 32168 . - 0 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 31528 31734 . - . ID=g3331.t1.exon3;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 31528 31734 . - 1 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 31176 31314 . - . ID=g3331.t1.exon4;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 31176 31314 . - 1 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 30764 30890 . - . ID=g3331.t1.exon5;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 30764 30890 . - 0 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 30400 30475 . - . ID=g3331.t1.exon6;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 30400 30475 . - 2 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 30096 30208 . - . ID=g3331.t1.exon7;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 30096 30208 . - 1 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . exon 28894 29866 . - . ID=g3331.t1.exon8;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . CDS 29619 29866 . - 2 ID=cds.g3331.t1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . three_prime_UTR 28894 29618 . - . ID=g3331.t1.utr3p1;Parent=g3331.t1 NODE_193_length_32659_cov_40.2591 . mRNA 29926 32496 . - . ID=g3331.t1.1.5b6be70a;Parent=g3331;Name=g3331.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 32447 32496 . - . ID=g3331.t1.1.5b6be70a.utr5p1;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . five_prime_UTR 32169 32223 . - . ID=g3331.t1.1.5b6be70a.utr5p2;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 32447 32496 . - . ID=g3331.t1.1.5b6be70a.exon1;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 32074 32223 . - . ID=g3331.t1.1.5b6be70a.exon2;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 32074 32168 . - 0 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 31528 31734 . - . ID=g3331.t1.1.5b6be70a.exon3;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 31528 31734 . - 1 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 31176 31314 . - . ID=g3331.t1.1.5b6be70a.exon4;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 31176 31314 . - 1 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 30764 30890 . - . ID=g3331.t1.1.5b6be70a.exon5;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 30764 30890 . - 0 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 30400 30475 . - . ID=g3331.t1.1.5b6be70a.exon6;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 30400 30475 . - 2 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . exon 29926 30208 . - . ID=g3331.t1.1.5b6be70a.exon7;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . CDS 30022 30208 . - 1 ID=cds.g3331.t1.1.5b6be70a;Parent=g3331.t1.1.5b6be70a NODE_193_length_32659_cov_40.2591 . three_prime_UTR 29926 30021 . - . ID=g3331.t1.1.5b6be70a.utr3p1;Parent=g3331.t1.1.5b6be70a #PROT g3331.t1 g3331 MKALKKKLGKYKPRHDKNDVEKVYKIGKELGSGNFAVVKLATKKEGGGRFAIKVIDKKLCEGKEEMIETEVAILRQVQHQNIVCMYEEFDTTDKLYLVLEYVEGGELFDRIVDQGSFTEKDASRLVRQISSAVNYLHGLDIVHRDLKPENLLFRTKEPDSDIMVADFGLSKLVNDNLCLQTACGTPNYVAPEILRQQGYGKPVDLWSIGVITYILLCGYPPFYDDNDAVLFQKIMKGNFEFNAPYWSTISESAKDVIKKMLVVDPEKRFTADQVLQHPWVSGKTARDINISSSISMNLKTYGKSGKFKMAAQAVTATNRMKKLSIRPDISEDAQ* #PROT g3331.t1.1.5b6be70a g3331 MKALKKKLGKYKPRHDKNDVEKVYKIGKELGSGNFAVVKLATKKEGGGRFAIKVIDKKLCEGKEEMIETEVAILRQVQHQNIVCMYEEFDTTDKLYLVLEYVEGGELFDRIVDQGSFTEKDASRLVRQISSAVNYLHGLDIVHRDLKPENLLFRTKEPDSDIMVADFGLSKLVNDNLCLQTACGTPNYVAPEILRQQGYGKPVDLWSIGVITYILLCGYPPFYDDNDAVLFQKIMKGNFEFNAPYWSTISESGMLCVNSDCVCVCVFAWYVLCYLC* # PASA_UPDATE: g3326.t1, single gene model update, valid-1, status:[pasa:asmbl_3066,status:12], valid-1 NODE_193_length_32659_cov_40.2591 . gene 318 1156 . + . ID=g3326;Name=g3326.t1 NODE_193_length_32659_cov_40.2591 . mRNA 318 1156 . + . ID=g3326.t1;Parent=g3326;Name=g3326.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 318 365 . + . ID=g3326.t1.utr5p1;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 481 491 . + . ID=g3326.t1.utr5p2;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . exon 318 365 . + . ID=g3326.t1.exon1;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . exon 481 636 . + . ID=g3326.t1.exon2;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . CDS 492 636 . + 0 ID=cds.g3326.t1;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . exon 1010 1156 . + . ID=g3326.t1.exon3;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . CDS 1010 1119 . + 2 ID=cds.g3326.t1;Parent=g3326.t1 NODE_193_length_32659_cov_40.2591 . three_prime_UTR 1120 1156 . + . ID=g3326.t1.utr3p1;Parent=g3326.t1 #PROT g3326.t1 g3326 MSFETGSSAIDNDKELQQFIELENQKAQFTARVHSFMDTCWDKCIDKPGSKLDKKEETCLVNCVERFIDTSFFIVNRLDETKRA* # ORIGINAL: g3330.t1 original gene structure, not modified by PASA NODE_193_length_32659_cov_40.2591 AUGUSTUS gene 26125 28601 . + . ID=g3330;Name=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS mRNA 26125 28601 . + . ID=g3330.t1;Parent=g3330;Name=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 26125 26193 . + . ID=g3330.t1.exon1;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 26125 26193 . + 0 ID=cds.g3330.t1;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 26330 26400 . + . ID=g3330.t1.exon2;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 26330 26400 . + 0 ID=cds.g3330.t1;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 26511 26607 . + . ID=g3330.t1.exon3;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 26511 26607 . + 1 ID=cds.g3330.t1;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 26752 27510 . + . ID=g3330.t1.exon4;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 26752 27510 . + 0 ID=cds.g3330.t1;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS exon 27669 28601 . + . ID=g3330.t1.exon5;Parent=g3330.t1 NODE_193_length_32659_cov_40.2591 AUGUSTUS CDS 27669 28601 . + 0 ID=cds.g3330.t1;Parent=g3330.t1 #PROT g3330.t1 g3330 MAATVSHELSYMQIKASAEARQTDEAKWEHRKRNMIVLILNHLRTSGYMESAEKLEAESHVSLKRFDVCDNVDLMTILQEFESFYSIKYNRPPKLVKKLQVAANGSDLNYGSEYESLAARSLMKAIPPIPPVGRAPREGSGGASAPSSRNGSGGGIGKSLSESDDRPSAAAFAPPSAPPANVSSPSRTSRSMSLTSKPPLPTAPAASARESGGKDSGSNKKGNAASSGGRDSPLGASADGMGMGMGLTVTSMASSAAGGAVAGKAKGGSGHAQQQAPQAPQAPEGAAPGSVARRAKYANGASGDAPLSAEDRLLKPLPFANGWNSEMRELAQVISRDIFSDNPNVHWSDIIGLDAPKRLVKEAVVYPIKYPELFQGILSPWKGLLLYGPPGTGKTMLAKAVATECGTTFFNISASSIVSKWRGDSEKLVRCLFELARYHAPSTIFLDELEAIMSQRAGGMGGGGGGGGEHEGSLRMKTELLIQMDGLARSNDLVFVLAASNLPWELDPAMLRRLEKRILVGLPCQDARRAMFESHLPRQIGEGHLAITTELDYESLGRQTEGYSGSDIRLVCKEAAMRPLRRVFDVLENAELSGEGGLEALGSLKLAPIENADVDAAIASTKPSARLLVDKYVAWQKEYESV* # PASA_UPDATE: g3328.t1, single gene model update, valid-1, status:[pasa:asmbl_3060,status:12],[pasa:asmbl_3061,status:12],[pasa:asmbl_3062,status:12],[pasa:asmbl_3063,status:12],[pasa:asmbl_3067,status:12],[pasa:asmbl_3068,status:12],[pasa:asmbl_3069,status:12], valid-1 NODE_193_length_32659_cov_40.2591 . gene 8343 21187 . + . ID=g3328;Name=g3328.t1 NODE_193_length_32659_cov_40.2591 . mRNA 8343 21187 . + . ID=g3328.t1;Parent=g3328;Name=g3328.t1 NODE_193_length_32659_cov_40.2591 . five_prime_UTR 8343 8484 . + . ID=g3328.t1.utr5p1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 8343 9113 . + . ID=g3328.t1.exon1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 8485 9113 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 9473 9575 . + . ID=g3328.t1.exon2;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 9473 9575 . + 1 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 10041 10280 . + . ID=g3328.t1.exon3;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 10041 10280 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 10542 10643 . + . ID=g3328.t1.exon4;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 10542 10643 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 10907 12655 . + . ID=g3328.t1.exon5;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 10907 12655 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 12861 13124 . + . ID=g3328.t1.exon6;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 12861 13124 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 13310 14128 . + . ID=g3328.t1.exon7;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 13310 14128 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 14355 14813 . + . ID=g3328.t1.exon8;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 14355 14813 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 14990 15295 . + . ID=g3328.t1.exon9;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 14990 15295 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 15514 16271 . + . ID=g3328.t1.exon10;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 15514 16271 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 16494 16711 . + . ID=g3328.t1.exon11;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 16494 16711 . + 1 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 16980 17230 . + . ID=g3328.t1.exon12;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 16980 17230 . + 2 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 17492 19669 . + . ID=g3328.t1.exon13;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 17492 19669 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 19872 20141 . + . ID=g3328.t1.exon14;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 19872 20141 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . exon 20369 21187 . + . ID=g3328.t1.exon15;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . CDS 20369 20812 . + 0 ID=cds.g3328.t1;Parent=g3328.t1 NODE_193_length_32659_cov_40.2591 . three_prime_UTR 20813 21187 . + . ID=g3328.t1.utr3p1;Parent=g3328.t1 #PROT g3328.t1 g3328 MSFQLPWGVIPEKFRSVDVLAIKNPGETPGDYVLKSLFQELTLTAKSKIDAVLAHSGEDAPIERTLQHGVDSQFDQLLNSFATVAQHCLEPLIQVLFSWRQRTCDIEPDADSVKAFLAECVPRQGQQRDAVTTLKERRALAVDFIFCRTLIEVLQQRADKLSESVAKDIEILAIQHFKSADFMYTTQTARNKSTVIDLYAEVIGAMSQTRFDSIRRRFLTEIHQSLPPQTLVNLVSGMKFIKLKMFPMPSLEESCKFMQECTDYFVQLKKCPEIKRAFAELFVELLIPVASVVKSEVNVPSFKTFVEMLYKSAMEMAKKTKYQQVAFPLVSALLCISQKKFFLDNWSSFLQMCLSNLKHKDIAMQRLALEAVYRMLWVYAVRLKGGGEGTKDSQARLKSIIEALLPRGSRAILPRDTPLDVFVNMVHFIAKSKIDLAMQEIIFDLVSAKAPPKTITAPERMIIGFRAFQAIVDDLQRNDGDPPFPIITEATPSGISMVVRAKPVTDSLDDITAQNLGLMTYHPKLMASLGHTLRALDGQVGRSLVMTNAAYAKKPFAEIATGERRLLLDLFKACLAMMPRLTPTGMTLSELVELLARMTIHLDGELRSAAYSALKGFLRTDPLLREEVIRGFVSFVQREIPDTCPLILEGALRMLIQLLAQWKTTLTPEAETGTGAGTNPTHHTDKRQSSATLDNAQGSPPKTNKDGPQAPTFEATAETLRRTEGLALLMLCSCRPVTRKLAIYILKEVRAVATAIVDPTGALASPSPAPPPRDPDVFEGFGAYRSRLASHSEKDLLSLESAPDGPLGVRVVDIIDRCGPDLIKRTLPPVPIARRRSSSLLREFSEVTLFSLADKGPGAEDDPWPACLGGLLKLMLPRCLEALGYAWSEAVQRLMLIHPILVENVGTTDSILQSSQAAPREGFSGTIARHLLRDGSNRIKKNISDEDISLWHNYLVFACCTAEDNEKPASSGAASGGSGGSTPAGGTDTSKKAMRSARELFRFVLPLIRSEAYYVRDAVVGALGYTNAKVYMTLVDEMQTYLAEARRPEDSIKKRRKRDILRLAISRVLELATDCFGVTSVAGDRRIVKFVVEYIEETKAFLCTEGHRDNPEYDDMRASFCAFVDSMCESIPRQDLRDAIFTREGRLSLFAVLSEWCEPAFPEMAGTAHSIFSGGSGMSSSGSTPFVFVPHASTTTPGEGIGSFVASNNRLLRQRIPSSGVTGPPSSEKSLSPLVTRALRGMASLCRGVLFDARAAQSDSYLFGWLDCILSARDESIRPIGQLMCELLLQNNRDISAVLEIVVERCYAGTPSIAGGYFSALAAALEDDTLPCPVVMVLNLVLYKTADHDQRIREKATRTLQRLGARFFSDKDTGEFSRHITVTTCLPTTYQQCQVELSTHLARQHPELTQDMFSEMTMRFDSASMGGQRSLLQYMIPWLANFDLEPVASLPIAFQILNNLFYITMRHGDDHVTEIEDIWGRFSPNPQNLHLTIRYLLQTRRNPEFLPHAKRIIVYLARTNPLQTINELVDELHSSGRDGDDKTFARGVEGVKGYVAPVERILPWTERMKPFARGDIALMLLVELVSDRNTEELAEHIPLLLHRAFLGLDHGFHLVHEHCKMLLVNIVHTLAPDTEATNEVIAAVRSREDKRMWHYEDITPKTPQIRSAVAVAALVGLVSVALENRKDIVDGWGKVAHSWAVTCSSRHYATRSFQVLRGLRPVVTERTMAAIMARLADCAADAAEEVQGYGMEILLTIEAMIEQVGASGELHLYPQAFWCVVASLESDYEHEFAMGVRMLLRIVGLMDVDNPSIRERLQEVLSKVEWERADPPFPGVQSLVLKGLTSPSTFAPTVEMIAKITPWSNNQIFDVSQEAGSLFNLVGLLPRLILGYEDNDQWAIAVSACLATALNLPKSINVSKMLTLYEKRAYTKGSDAWIEELCKYICEAFFPKYEPQLFTLLVEMLEIGPEHYQQPVLKILHGLIRNSNLQTSSLRGCSGPVMASIARMLKSPLWEESLKVLDAAMFISRVGASSPALQTAARGGITRKDSISLQFLTTNPWRQPQLCQATVRNRLTMLVRTFSPRGAPGDAPILERPSVPVVFRAEEESSSAMDEMFSNNGDGDAGERTQTEDVVHAVLGGGGPDMDLLESGQFFNDFDFLTEALEQVEKEEAAERLRTRSESTLTDDSSNDVSSLANDASSPAPPTSSADGEQPKLRSQRASAELSEESMLSKSLPQAGLHTAMRQAREQVAAENAAAAVALPARSVEYEDIPTRRKQVTPPPLPPKHSAIGAASLTIDRRGSLPATPTNEPLAASALASASVSGPSLEVARTLRNQRAISAPLHPTVALRASTSSLHSMGANSPSVLSEEGDELPPPPGDMQRASPSSLSSSTSSIAAGTPGGAQQCGVVSGRTPSPQPPSPSPEDIALSGSGHVRRLSQQMFQQVQHPRPPLPSTPVAHVTPMSQSTSPSSESPSDRVPRLRVTRSPSDAEVHYISAAAAAAAVAASTGASTPGSTPGAPAGKLPNGQRPPVAPKRPRGLSEPPPKMLPSAGHVAGTAGGDRPPSSPLPMPRMGLPMHLPHPSPSIADDLRSGPTVPDAVLTQSVAAAARAWADHVSRSMGDLNCECASRTFTEFVRLYSKIIEGHRAIVAGVIRVAADAVPDIIARVRSQVDAVLAIEIPFAYANAAAFKQTRLTDAHNSLLIEIGEHVELYVAKRAAAAHSLVDAQAGSMQQAVADGTLYFLLRDTIELHAELVAILGSFGNLVDAVSGAKKSTPTEVTDISAQLTAARELLRRAPPLGIPESIDFASFDAASELSRHDASQTIVASLRSPIACGQAPALLNAFRGVFASNPDAFFAGIDGNFEYIALLGVMANECAHDVRGAVLATVVREPRVSETCRLLGDDVIQLLAAVQADRRIRRTSVA* # PASA_UPDATE: g2705.t1, single gene model update, valid-1, status:[pasa:asmbl_7479,status:12], valid-1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . gene 211 1346 . + . ID=g2705;Name=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . mRNA 211 1346 . + . ID=g2705.t1;Parent=g2705;Name=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . five_prime_UTR 211 211 . + . ID=g2705.t1.utr5p1;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . exon 211 394 . + . ID=g2705.t1.exon1;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . CDS 212 394 . + 0 ID=cds.g2705.t1;Parent=g2705.t1;5_prime_partial=true NODE_4621_length_1400_cov_35.8272_potentialcontaminant . exon 679 782 . + . ID=g2705.t1.exon2;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . CDS 679 782 . + 0 ID=cds.g2705.t1;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . exon 934 1081 . + . ID=g2705.t1.exon3;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . CDS 934 1081 . + 1 ID=cds.g2705.t1;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . exon 1239 1346 . + . ID=g2705.t1.exon4;Parent=g2705.t1 NODE_4621_length_1400_cov_35.8272_potentialcontaminant . CDS 1239 1346 . + 0 ID=cds.g2705.t1;Parent=g2705.t1 #PROT g2705.t1 g2705 GDSFDLVVDALFSRRTAIPYDYYSWENGESPYLCAPAEIKSQSQNLGQSILGDRLKNSVFKFSFLEEVSCAQVCPSRKIQKEPLLTALKNSYKQRWFVANGLPVETVVMSKDGTELYTHGIPMGMGCKAQSIVGAWRPCQYGTSEYALFNHFSFEFIYNPLDPIRTGPSSGLMTGVYCMA* # PASA_UPDATE: g6836.t1, single gene model update, valid-1, status:[pasa:asmbl_2969,status:12], valid-1 NODE_1901_length_8655_cov_37.2494 . gene 240 1409 . + . ID=g6836;Name=g6836.t1 NODE_1901_length_8655_cov_37.2494 . mRNA 240 1409 . + . ID=g6836.t1;Parent=g6836;Name=g6836.t1 NODE_1901_length_8655_cov_37.2494 . five_prime_UTR 240 241 . + . ID=g6836.t1.utr5p1;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . exon 240 288 . + . ID=g6836.t1.exon1;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . CDS 242 288 . + 0 ID=cds.g6836.t1;Parent=g6836.t1;5_prime_partial=true NODE_1901_length_8655_cov_37.2494 . exon 745 889 . + . ID=g6836.t1.exon2;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . CDS 745 889 . + 1 ID=cds.g6836.t1;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . exon 1148 1409 . + . ID=g6836.t1.exon3;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . CDS 1148 1378 . + 0 ID=cds.g6836.t1;Parent=g6836.t1 NODE_1901_length_8655_cov_37.2494 . three_prime_UTR 1379 1409 . + . ID=g6836.t1.utr3p1;Parent=g6836.t1 #PROT g6836.t1 g6836 SVHGTLCHIILASKLWFCRMTGTPTGGIERFWRDGEYVATDAISSVWETAYATRSEVEDEMQRVSQAWKPHIESLGALRLSEEFHYNDTSGTPHTAVRGRILLHVMNHGTHHRGQVSAALSQWHQKTPAMDLLYFGGGDE* # ORIGINAL: g6838.t1 original gene structure, not modified by PASA NODE_1901_length_8655_cov_37.2494 AUGUSTUS gene 7478 8542 . + . ID=g6838;Name=g6838.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS mRNA 7478 8542 . + . ID=g6838.t1;Parent=g6838;Name=g6838.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS exon 7478 8542 . + . ID=g6838.t1.exon1;Parent=g6838.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS CDS 7478 8542 . + 0 ID=cds.g6838.t1;Parent=g6838.t1 #PROT g6838.t1 g6838 MTTVWWIATLGAIVLCTTLIDVVWTTLSASSQGPITTWWSIGLQALARGIFWRVGVVRGSLGIVIMISVVLLWYTLLWLGWALVFGANRDAVLSSTTGEQANVIQIIYFSGYCIFTLGLGDFTPNPNMGFVLWLAVVSSGTGFFLVSLSATYLIAATQAISESRALANTIACMGATPMHILYNAWESHCEEFVGLDAALMQVSQMLVSESQKLTLFPYIFLFGSYDHVTALPIRLAAIDEVVTIVAYAVATGRRGTPKLALSLAHNAMSEYLDTLCSVTKMPAYSPVPPPPDFSALRQMGIPLRFDDAELVALYESVEIKTRRSRLGTLVTSHGLTWRDVYALPYDRKGQYRIG* # ORIGINAL: g6837.t1 original gene structure, not modified by PASA NODE_1901_length_8655_cov_37.2494 AUGUSTUS gene 4790 6436 . + . ID=g6837;Name=g6837.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS mRNA 4790 6436 . + . ID=g6837.t1;Parent=g6837;Name=g6837.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS exon 4790 4951 . + . ID=g6837.t1.exon1;Parent=g6837.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS CDS 4790 4951 . + 0 ID=cds.g6837.t1;Parent=g6837.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS exon 5105 6436 . + . ID=g6837.t1.exon2;Parent=g6837.t1 NODE_1901_length_8655_cov_37.2494 AUGUSTUS CDS 5105 6436 . + 0 ID=cds.g6837.t1;Parent=g6837.t1 #PROT g6837.t1 g6837 MDATYLDVAATASVMLAESPVTRGIKLRTFGRDAAMGALGYETSTGCWIDIPGEHALRIAIGKNFNTRGCGANINIEINANDPENGRPRTVFYCGFEHGDFDLKGPQSPFGASHYFFGLCGSDNYAECDVKFFRGLAGRMGVDVSSFPSYLSVHNSSWDAVASFMIEWLFLAVVDSIEPLSPGLFRKEREVWSSRDAYAPPTTHIRDISLAERIMAQCCAQSAAPSRRLHFVRALLRQRHRQCKPRLELCRWENRDIVQSDYAGCIYLQTDYICDAVFTPSPDADGGIGEGIPTAMPFGKSTFRMRICQVIAGGYAFRSMIFAVFAAALRTSKSSNDSPMRACLGAPNEWMPVHWTVEGVDKMRSFSRQQFWQHLCIAQKIELRSLSERGGVPAQVLNRPVGDETWLADSSLPHDHDSTIAPEVAALFKYDPERALHWGHRGQSGRASECDEQQLQRELALRLVNDLRIICFLTWKDHVYYDPDLEPPIRSDTCQWL* # ORIGINAL: g6743.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 15777 18613 . - . ID=g6743;Name=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 15777 18613 . - . ID=g6743.t1;Parent=g6743;Name=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 18458 18613 . - . ID=g6743.t1.exon1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 18458 18613 . - 0 ID=cds.g6743.t1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 17326 18138 . - . ID=g6743.t1.exon2;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 17326 18138 . - 0 ID=cds.g6743.t1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 16983 17209 . - . ID=g6743.t1.exon3;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 16983 17209 . - 0 ID=cds.g6743.t1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 16674 16865 . - . ID=g6743.t1.exon4;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 16674 16865 . - 1 ID=cds.g6743.t1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 16425 16447 . - . ID=g6743.t1.exon5;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 16425 16447 . - 1 ID=cds.g6743.t1;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 15777 16243 . - . ID=g6743.t1.exon6;Parent=g6743.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 15777 16243 . - 2 ID=cds.g6743.t1;Parent=g6743.t1 #PROT g6743.t1 g6743 MRPKIVDAQVLKRSTSSLSLRLFPELAANDTRLYLAVYEVQRIGCPGVGNVMVNGTTIRNGIFVDTRNITRDQYYSYVIRAYHPVDTSLVSETVTLDEVQASRADRPDAPSTVVAASTFEASVVVVRLTWVEDVSSGIILSTRIARNNVQIAIVSANATSFIDRKVAVGASYIYTVWSTNTYGESNSTSSESVTVISTAMSSANVGAIAGGVVSSIVGATAILVGILWYRRRATSKRAEAMARSELELIDTVVQRPEIGDLEIAGASIHLVERIGEGEFGEVYLATVPLSEGETLTKVAIKTFKVTALSSVNEIRSARSAFMQEIDLMRVVPTHPHVVELLRVCTRSEPNCMILSYAAHGDARHYVQKTITLSPIDLLCFSIDIARGMEHLANCGIVHRDLAARNCMVFAGPRPLDPQEKGWPLSAKADVVVKIADFGLSRDTALTGDYYHAKTKRKLPVKWMAPESLEKHVWSFGITVWELFARGSKPYPGLENYAVSEYLLQNKRMAAPTGCPSEVFAVMESCWRRHPETRPQFTQVTVKLRRAMAALCGMSQTQANVADTAPVANNAADGAGACYVETVPERPSYMETVGDDGGLHTVRNPIFQQESISADSDSSAHIFVVM* # PASA_UPDATE: g6740.t1, single gene model update, valid-1, status:[pasa:asmbl_8295,status:12],[pasa:asmbl_8296,status:12], valid-1 NODE_57_length_48406_cov_42.1728 . gene 1522 8952 . + . ID=g6740;Name=g6740.t1 NODE_57_length_48406_cov_42.1728 . mRNA 1522 8952 . + . ID=g6740.t1;Parent=g6740;Name=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 1522 1752 . + . ID=g6740.t1.exon1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 1522 1752 . + 0 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 1953 2116 . + . ID=g6740.t1.exon2;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 1953 2116 . + 0 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 2650 3530 . + . ID=g6740.t1.exon3;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 2650 3530 . + 1 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 3642 3725 . + . ID=g6740.t1.exon4;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 3642 3725 . + 2 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 3896 5973 . + . ID=g6740.t1.exon5;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 3896 5973 . + 2 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 6153 6265 . + . ID=g6740.t1.exon6;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 6153 6265 . + 0 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 6398 6533 . + . ID=g6740.t1.exon7;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 6398 6533 . + 1 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 6770 6872 . + . ID=g6740.t1.exon8;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 6770 6872 . + 0 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . exon 7243 8952 . + . ID=g6740.t1.exon9;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . CDS 7243 8477 . + 2 ID=cds.g6740.t1;Parent=g6740.t1 NODE_57_length_48406_cov_42.1728 . three_prime_UTR 8478 8952 . + . ID=g6740.t1.utr3p1;Parent=g6740.t1 #PROT g6740.t1 g6740 MASLLSFVRVDASAVQTAFYVDGTSIYRHGGSTVGFVAAVAMPVSKPGYLPTENAISTRDYLRYFRYVRTLQGNAVTVSGLQPPEFYRALASYNADKRNDPLLVIHSVWPNAIGKQLTTRFSGGRRQSAPSDALNAFDKAYTDSFLRTAQSCADAVNGVLYPDVASTSEWTLAWVIGPDEWSVDVVNRTNTVYDPAQEAAAYASIGVRSNPADTSAVYFSPSPLSSPFERFLVWAANAIAAADSKRGWQRPVSALTSPRTDPMTHANVPRFPVSQDDWLSVDAVAALKPTSGFKAGVACVALVRPFDPTFLAVDATGAYGASSDALSEYILSLRSFYETVPLILLGMGLPTSHGRALSGSMGRHCGGIDETEQGRMVASFVGMSAIAKCQGIALFELLDQWHRNGPGWDGSPAESAGRWRNAIVGGQNFGLVAAEPRGAINVDGDTADWNGFTSGTYSDAAQNQRTMATSTSSRLKRLRMAHDASYLYILAESASSSPWRVGDDLVIAFDSVRNYGSHSVDFDGSLTFERGVDFVVRYRVTNAGDGTASENATVYVNAALNSFRTAGDAVGLSESGVFRPWSQVAGPESAWAVVGGTTVRVPSPVYRLGELVRGSTSLATWERKSGVLEMRVPWSLLGFADPTRLLVRTFTDNGLDAGSTAATAEKMSSLVVQASVNGKVVPSSTYAMSAASPCVCERFKRGATSIASAFAGARNGLPSNATFTLPPGAVYCECPPAPEHEASLMMRSHLVEIAIGILAVHLVFIGFVRPLWLALVWAVTRNKQGPIERLRARMGGRYSPSSETHIIADEDDTIQVHVRGANDSAARDALTAQPITSGGTHAIAESGSQSPSLPGWTLSRVRGSGVGGTTITPVAAGSNTAPVSSLGGGTDASRDAARKERAAVRMLQWIACALVLMAAAGLAAAIHLSGRSILATAKQICDDIAGEGEDTLFEVAFFALYMFVQNWDAFLLLVCSFVVPWRGPGRRANKVRVETVDEAATSLRNGRAEAWTAGGGSNAQRSQSTLTGTHAFIIACHNSSKKIGATLDSILHLCEPWQIFVADNGSSLAEVELTDRACREATARYVSVHAGYKGSGVSFGSLPEGNKTVAQFATAYNLRNYYSQQIDFVTLVDDDTIVPPSWSEKAVLGYFADPAVKCLAYPLCANNKTHLLALFQDMEYLLAGFFRIVQSRLGTTLFASGAFSTWRTEYLLDILYRHDTMHHGDDLQQGLLLHSLRGQPWVIDPAKTHAGNYKVTCAETVLISTDVPACWIHASDVLPRAVVKRTGMHPCACGEPSLFQQRGKGWDVSRQRFLWKYVKMVFRVRNWATWRGVWSRIIAVHDIALIINDWVLLTYGLAVLVLYQNYRLFIQGLLLSWAFQIIAFHAFELFVLEWGVGKRVSPEVRVLFPILYKLPMLLFVRVHGMFYNIAYYLPCVRNKSKIRRRIENKPSFRTMVDGAYGRTDSAAGGAKTPEVTTAAPSVGATIRFAPDASRVDVDGSSRDQGDGADEALDVNPMLLETFAHELRLPGFGNRTWDRRRAGGVWGDTAESVETVHIDVAGDVASAGHWRPPVAPRTLKRRLSSVPSLTPGAGASGEASASGGSSGSSGSSGSSGSSGMASGTAAPLAIPTQISRVVTHPVAVAEAAEQSVVGETPARRAKAKAKAPRRIDRSD* # PASA_UPDATE: g6744.t1, single gene model update, valid-1, status:[pasa:asmbl_8293,status:3], valid-1 NODE_57_length_48406_cov_42.1728 . gene 21451 29349 . - . ID=g6744;Name=g6744.t1 NODE_57_length_48406_cov_42.1728 . mRNA 21451 29349 . - . ID=g6744.t1;Parent=g6744;Name=g6744.t1 NODE_57_length_48406_cov_42.1728 . five_prime_UTR 29136 29349 . - . ID=g6744.t1.utr5p1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 28995 29349 . - . ID=g6744.t1.exon1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 28995 29135 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 28680 28772 . - . ID=g6744.t1.exon2;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 28680 28772 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 28313 28377 . - . ID=g6744.t1.exon3;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 28313 28377 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 27477 27559 . - . ID=g6744.t1.exon4;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 27477 27559 . - 1 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 27096 27287 . - . ID=g6744.t1.exon5;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 27096 27287 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 26733 26842 . - . ID=g6744.t1.exon6;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 26733 26842 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 26262 26376 . - . ID=g6744.t1.exon7;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 26262 26376 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 25867 26121 . - . ID=g6744.t1.exon8;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 25867 26121 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 24999 25688 . - . ID=g6744.t1.exon9;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 24999 25688 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 24630 24743 . - . ID=g6744.t1.exon10;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 24630 24743 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 24233 24376 . - . ID=g6744.t1.exon11;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 24233 24376 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 23869 23921 . - . ID=g6744.t1.exon12;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 23869 23921 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 23373 23493 . - . ID=g6744.t1.exon13;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 23373 23493 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 22732 22987 . - . ID=g6744.t1.exon14;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 22732 22987 . - 2 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 22463 22628 . - . ID=g6744.t1.exon15;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 22463 22628 . - 1 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 22002 22285 . - . ID=g6744.t1.exon16;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 22002 22285 . - 0 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . exon 21451 21597 . - . ID=g6744.t1.exon17;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . CDS 21453 21597 . - 1 ID=cds.g6744.t1;Parent=g6744.t1 NODE_57_length_48406_cov_42.1728 . three_prime_UTR 21451 21452 . - . ID=g6744.t1.utr3p1;Parent=g6744.t1 #PROT g6744.t1 g6744 MRLPRVLVRRTGLFVNVAFVCAVGWALAVAFLDAPRNECGMTYMHPAYARVAVDNEGASTQKPHVPYALFHYVDGGTVGTLDMDSRIPVLFVPGNAGSYKQARSLGGVLRRLAEAGLIRGVHLDVFTVDFGDELSGLSGAILARQSEFLGRCVSAIRRYYAQSLRAQSVSDGTIVVGHSMGGIVARYAMVTGSVDPVAVLLVATLSTPHAFAPVLFDSQMTHIYRAIQARDLPPSHVPPLLSISGGFSDTLIRGDSTVVTGTCDARSHTPPHVTPATYPGCALSVASAAMPGVWVDADHNCAVWCNQIVTALALSLAVAGTRHVTSRGKQDARGAMERENTSIHFLAQLFEDNPLVPGDASHNYRTKHAVSPSAESTLVHSWHVIDDDTEVLIPLNGMAVSGAALAIVAPFALPGYLEFAASPDAHPVRNVGGSIRIACIPHITHSARGEDVALGELRVPLATLFTANYKNSGLEGGDKGGHPRFRLIPSPGTAVRQEYAVTRADSLTSFAGVLVLEGAEAEALRVEALRCSTRTGNVSSTHIAVGFRGLAVGSLQQSGWIAAHTGPITALDVTVGLLGSGETLLLNKSRSLLTRVCVHGITQRWQSQSVSIVSVNGCKGRLKTVVTQRSMWSGEARHYREASAGASTSALDFRIQFFSSLVEANRAEVAHVLLEIVSDPACELSLHFRADASVLAGQLARFYVPLLIPATFTMSLVVPLGGHVRAALSALVAGMCATAIHLATADDSSDHVTRSPFDSLSDNALFGRQGSDARMGILLGCVAGSAFAAVLYTCTRAAMCAVSSLTRTLTRRGGKRGFVVAIPGLCVSSAALLLAILGVDIPVVAIFVSAGMFLAASLAPMDALGEMQPFFSALPSLVCTTATLCLFSVAGYSAALAKSLVDSSVPRPPRMDAWTAIANGSNGGGVDGADALGSGRGLMSFVVCGSAWAVLWPVVAHRVARSRRRQRGTAVICGVLCILSASLGIVRVYRLLYVASLLCLLTLGTALL* # ORIGINAL: g6749.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 47303 47745 . + . ID=g6749;Name=g6749.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 47303 47745 . + . ID=g6749.t1;Parent=g6749;Name=g6749.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 47303 47414 . + . ID=g6749.t1.exon1;Parent=g6749.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 47303 47414 . + 0 ID=cds.g6749.t1;Parent=g6749.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 47642 47745 . + . ID=g6749.t1.exon2;Parent=g6749.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 47642 47745 . + 2 ID=cds.g6749.t1;Parent=g6749.t1 #PROT g6749.t1 g6749 MEHERINASTDDEFVQVAVSFLERHLNEAIAARGHAVIGFSGGSTPKPIYKALASAKVDWSKVSLFLVDER* # ORIGINAL: g6742.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 14184 14834 . - . ID=g6742;Name=g6742.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 14184 14834 . - . ID=g6742.t1;Parent=g6742;Name=g6742.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 14184 14834 . - . ID=g6742.t1.exon1;Parent=g6742.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 14184 14834 . - 0 ID=cds.g6742.t1;Parent=g6742.t1 #PROT g6742.t1 g6742 MSDIVAVVAVVAGGFNSLSPETVVHHIVPYLSNVNVSSLAKVNRVLHAHLRTASVSPLASVQYIEDAAFREEVKATIPVGRLVLDGCKRGESHRDLAPFAGVFSVTLDDDSLPDLTPVHGVKELVLLGLTMIDVAPFSNLQRFSMKGQGTLRNSAALSMVRDIELIGVSVDSIEFLGATRVHLFWCGLFCNNTARYITDISGCETLAMFICVDSNA* # PASA_UPDATE: g6741.t1, single gene model update, valid-1, status:[pasa:asmbl_8292,status:3], valid-1 NODE_57_length_48406_cov_42.1728 . gene 9498 12299 . - . ID=g6741;Name=g6741.t1 NODE_57_length_48406_cov_42.1728 . mRNA 9498 12299 . - . ID=g6741.t1;Parent=g6741;Name=g6741.t1 NODE_57_length_48406_cov_42.1728 . five_prime_UTR 12231 12299 . - . ID=g6741.t1.utr5p1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . exon 12111 12299 . - . ID=g6741.t1.exon1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . CDS 12111 12230 . - 0 ID=cds.g6741.t1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . exon 11348 11498 . - . ID=g6741.t1.exon2;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . CDS 11348 11498 . - 0 ID=cds.g6741.t1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . exon 10820 10908 . - . ID=g6741.t1.exon3;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . CDS 10820 10908 . - 2 ID=cds.g6741.t1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . exon 9498 10248 . - . ID=g6741.t1.exon4;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . CDS 10123 10248 . - 0 ID=cds.g6741.t1;Parent=g6741.t1 NODE_57_length_48406_cov_42.1728 . three_prime_UTR 9498 10122 . - . ID=g6741.t1.utr3p1;Parent=g6741.t1 #PROT g6741.t1 g6741 MAFLTRALPAALRTPALIPRRGMADAASGKVILTFVSPVGALYAAKHVSQVNVPATAGDFGILGDHVPTIAVLRPGVVTVTEGDQDKKFFVSSGTVTVNADSTVQILAEEAVPLENLDPQAARRGLDSFSAQLNSARDDLGRAQAEIGIEVHRAMCFALNA* # ORIGINAL: g6747.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 33799 37351 . + . ID=g6747;Name=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 33799 37351 . + . ID=g6747.t1;Parent=g6747;Name=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 33799 33801 . + . ID=g6747.t1.exon1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 33799 33801 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 33926 34004 . + . ID=g6747.t1.exon2;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 33926 34004 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 34194 34282 . + . ID=g6747.t1.exon3;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 34194 34282 . + 2 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 34527 35189 . + . ID=g6747.t1.exon4;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 34527 35189 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 35366 35519 . + . ID=g6747.t1.exon5;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 35366 35519 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 35777 35861 . + . ID=g6747.t1.exon6;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 35777 35861 . + 2 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 36013 36154 . + . ID=g6747.t1.exon7;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 36013 36154 . + 1 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 36413 36494 . + . ID=g6747.t1.exon8;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 36413 36494 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 36864 36949 . + . ID=g6747.t1.exon9;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 36864 36949 . + 2 ID=cds.g6747.t1;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 37301 37351 . + . ID=g6747.t1.exon10;Parent=g6747.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 37301 37351 . + 0 ID=cds.g6747.t1;Parent=g6747.t1 #PROT g6747.t1 g6747 MASPVDPAKHAGQQFLNFVHNAPSPFHAVEESRIRLTAAGFTELKEKDSWDVKQGGRYFFTRNSATIIAFAVGGKYVPGNGFTIVGAHTDSPCLRVKPVSELKKGNFLSVGVELYGGGLWHTWFDRDLGLAGRVIVKDDAGAYSHRLVRIDRPILRIPTLAIHLNREVNTDGFKFNMETQLVPVLATAVKGQLERIVPAAATPANALPTGPRPTADKHHPALIRLLADELKLTDPAKQLLDFELCVADTQVPVLGGIAEEFVFAPRIDNLMSSFCALTALLETSNAESLANEPNVRIIALYDHEEVGSSSAQGAASSLTEFLLRRLSSGGIPNAFETAIPKSMLISADMAHAQHPNYSEKHEENHRPAFHCGPVMKFNANQRYATNAVVAAILHEVATKNNIPMQDFVVRNDSACGSTIGPILAANLAMRTIDIGSPQLSMHSIREMCATTDIVHCTSLLKAFFEQFPVIDAAITVD* # ORIGINAL: g6746.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 31853 33307 . - . ID=g6746;Name=g6746.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 31853 33307 . - . ID=g6746.t1;Parent=g6746;Name=g6746.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 31853 33307 . - . ID=g6746.t1.exon1;Parent=g6746.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 31853 33307 . - 0 ID=cds.g6746.t1;Parent=g6746.t1 #PROT g6746.t1 g6746 MGVLLSVLADPLRIYRTAPSLGCLALWAQYWLRAAAGHVRASSSRRFGFLLGANRPPVAGSTFVSAKWLTGVLRSKGAIAANDEVAAVSPEDLHGNRGLGSAMTRLRLTYADRGSPSAGPATLILKTSQCSVLRNRFTAIATGAAREGLFYGSAWASELSQYIPRVHYSRGSLLTGDSVTVMEDFGGHALPVNMVFGNQCWGIPDGTPVRDPKTVLVTAVECAARLHASMWNDPSLVRRGGGRGRFELRSALWYRGEGRASWEMGMQYARNSWSRVRNNTAAGGVVWSDKMLSVMDKSLARASWDALQRRLQDRSIPFTLTHGDWHAANMLWRLAGEGEGSAAEGIVVVDWTEIGVWEPMADIGQMFISDINPTFTRKVEQDVLDAYWERLQSECERRGIHGVREAFPRAQCEELFCTSPVERWLWLLALLAAMQLPPAAVQYFHDRVLAFIEAHGDREWYEMKPICTFAPSTLSGLWHSSSTL* # ORIGINAL: g6745.t1 original gene structure, not modified by PASA NODE_57_length_48406_cov_42.1728 AUGUSTUS gene 29746 30958 . + . ID=g6745;Name=g6745.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS mRNA 29746 30958 . + . ID=g6745.t1;Parent=g6745;Name=g6745.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 29746 30790 . + . ID=g6745.t1.exon1;Parent=g6745.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 29746 30790 . + 0 ID=cds.g6745.t1;Parent=g6745.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS exon 30945 30958 . + . ID=g6745.t1.exon2;Parent=g6745.t1 NODE_57_length_48406_cov_42.1728 AUGUSTUS CDS 30945 30958 . + 2 ID=cds.g6745.t1;Parent=g6745.t1 #PROT g6745.t1 g6745 MAPNLSTIPIEVVVEHVTKYLGQRDLDSLARVNSILRSSLMHRRLFTLRQEYAKRFYKDMTFRMDVLLTLPLHRLVIVLSEMADTVTDVSGLGGVHSLDLSWCSELTDVAALGAVHTLNLSNCVALANVSALGKVHTLNLHRCIDLVDVSALGDVHTLNLSESGCVDVSALGRVHDLNLGFCTSVVDVSALCDVHTLCLSWCSGVRDVSMLGRVHTLDLTGCNQVVGVRALGGVHTLNLSYFVGLDDVSFLGGVYSLCLFHCRNVVDVTALGGVRVLDLSDCCAIADVSALGTVHTLCLRGCTDLTDVSALGGVHSLNMSFCENVVDVSALGKVHTLNLHGTRVTDVSSAAN* # PASA_UPDATE: g6748.t1, single gene model update, valid-1, status:[pasa:asmbl_8294,status:12], valid-1 NODE_57_length_48406_cov_42.1728 . gene 38877 45593 . - . ID=g6748;Name=g6748.t1 NODE_57_length_48406_cov_42.1728 . mRNA 38877 45593 . - . ID=g6748.t1;Parent=g6748;Name=g6748.t1 NODE_57_length_48406_cov_42.1728 . exon 41298 45593 . - . ID=g6748.t1.exon1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . CDS 41298 45593 . - 0 ID=cds.g6748.t1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . exon 40680 40960 . - . ID=g6748.t1.exon2;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . CDS 40680 40960 . - 0 ID=cds.g6748.t1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . exon 40374 40434 . - . ID=g6748.t1.exon3;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . CDS 40374 40434 . - 1 ID=cds.g6748.t1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . exon 39948 40070 . - . ID=g6748.t1.exon4;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . CDS 39948 40070 . - 0 ID=cds.g6748.t1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . exon 38877 39706 . - . ID=g6748.t1.exon5;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . CDS 38942 39706 . - 0 ID=cds.g6748.t1;Parent=g6748.t1 NODE_57_length_48406_cov_42.1728 . three_prime_UTR 38877 38941 . - . ID=g6748.t1.utr3p1;Parent=g6748.t1 #PROT g6748.t1 g6748 MDGDCGRTSPISRSTTHRWYATPMEHGAEIVSVRRRQSPTYMRVAVLLYVILALTSAACFATSASAQTREVSLVGASSFVSVLSSTAAALAAEGGPADATISLVADPSSSGPLRFGFGDLALTGHEITVFGNGLSLQVSCSVPFDPDAMTLSAGKLTIVDVTVVGCSGANGDPALAGQFGRLITINDGASLTVARTVFEAHECIFLVRGSGALAIKDSTIRDVVGPLFADSAFNDYTLSSFSGAVVYGLGTSLNAKIDISGSKISQVESQKTGGFFRLERADMTVSGTSFSSGGTTSTSGGFGGFFFAVSGGLLSASASTVSFQNSTFTDIHSMEGALLKLESVSEATFTNCTVRSIRGSVSGGLVSAVSSRVTLSQCTVSDVSVTSFVGIPDSGIARVDAGSDLNVVDSSFTEITAGNAAFAYVSGSTVRISGSQLSDFSATSTVEGTGGLFLAYGSISGAGPATVNMVSCTVARVSARVGGIAYLMTQGYSSDVSLLNSTFTDVSVDRGGIFAVVLPKALPFGNPNFLQDTPTTGTVTGSVIRRVSARLDGGAFFIEGGKHTLAVTDTEFDAVSAVNSGGIVSQRSSGGGGCGAGATTQLTPPTITIANSRINNADALDGGVYYGSAALTVTGSTFTNLSSSDWNVAAVHLTESEFCVLDVSDSVFADVKGTVLQLDDRTSATMTRVAFSRVRGARGGIVYASSFSNTTMNECTFSSISVLGSGAVIYGADDSLIYATKCSFENTSATVGGGIALLGYRSRLFLDNSVVANVSGASGGSFSIIDQGELHVDATTVAQTTASNGGFAYLRDDARMYLSKGALSGASATGSGGVFRLSGRSSVVVDNSAFADIRGALSGGFASLDELSSLLVKNTNATSVSGGFLSAGSRSQATLELTRLFMVSTNGNGAFADVSGGAQVNVTSCHVRRSTARGSGGVFNCFGGQLDVSWSTFADVASLSSGSVASLDAACRMHITDTEIANVTLLEQSHGGRGGAFLVANARSDLSLIGVGISDISVDSRVGGVVAAFDGATVLLSSVVVSNASAGDGGSIYLSNGARCRVQNVTVTGSKSSGKGGCVYAGNEAHVVFDGARFETCEANTGGSIYAESTATVLSASLTINGTNAIHGPGIYLESPESPSIGNVTFVGGAGAIDATQLPPGWVRGGLIATGLRSLDVPSGLVARSGALLPTFSVAVLDALRQRISLPLGAPLAIALSLKPVADGGNTTNAKLAGDVERNFGTGTTVLFSSLRLYARPGAYALSISSSNPLLYGAGDQDAARKRVLESSIIPVNVTDCSSGSALIYGPISTGDLESVWHCEVIVESAVVSVSSDNTSKIVPAIVIPCIVGIVVLVVVLRWQTMMARRRRSKEAHRRFLEDHMAQQGGDERPTELSREDVELHERLGEGEFGVVQKARATIGGRPRICAAKTLKEGSTYEQRVEFIKEAEIMHGLVHMNIVSLIGVCTAVEPVLIVLEYVPHGSLLSFVRAIPDKNRSTSATRAMFAQFVLQICEGMAYLASMRVVHRDLAARNVMVGQDAFGEYVMKVADFGMSKDVGEKDYFRVAGTEKVPVKWLAPESLSTRVFTEASDVWSFGVVCWELYSFGQVPFAGIPMADMRSLIARGDRLAKPSLCLDTTYAHLLACWEYEAADRPRFSLLASLLQQSASDYDGGKLGKPLPTMPKSTGSYANLPMAQDSVYDNGPHLAGTDAPTGKGEFLKAATKGLAPPAKNGSYASLTGHKFVSALEPDAARETAYANDGIAAAPVGKNHPDSSDSQLHSSSRGTMSRLSQLKSSYISLSLGDVRAGSKKGVAAANQSLYDPDAGIELEGVTIGHAYESAI* # PASA_UPDATE: g7412.t1, single gene model update, valid-1, status:[pasa:asmbl_9530,status:12], valid-1 NODE_819_length_17334_cov_41.3358 . gene 7938 11868 . + . ID=g7412;Name=g7412.t1 NODE_819_length_17334_cov_41.3358 . mRNA 7938 11868 . + . ID=g7412.t1;Parent=g7412;Name=g7412.t1 NODE_819_length_17334_cov_41.3358 . exon 7938 10518 . + . ID=g7412.t1.exon1;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . CDS 7938 10518 . + 0 ID=cds.g7412.t1;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . exon 10799 10943 . + . ID=g7412.t1.exon2;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . CDS 10799 10943 . + 2 ID=cds.g7412.t1;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . exon 11176 11522 . + . ID=g7412.t1.exon3;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . CDS 11176 11522 . + 1 ID=cds.g7412.t1;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . exon 11747 11868 . + . ID=g7412.t1.exon4;Parent=g7412.t1 NODE_819_length_17334_cov_41.3358 . CDS 11747 11868 . + 2 ID=cds.g7412.t1;Parent=g7412.t1 #PROT g7412.t1 g7412 MTGTYTLVASDACATHRWATSRLRSCLAAPARSPRTDESLFAMISEPGHAIVYSLTRSAASTADELPHRCDLLGESNAKYQISTLRFIEFPNENDEPEAHGWSSSGRAYAVACSTSVCIFAVDHTRHSIGGANRVRRVCRIPLHFLPKDVALAELPELESHKDSHCVLVAVAGPSCVLLFSVVWMPLSGQADDGAVDDAFLWNVSIFDEQHINYSIGTLAFSEDASHMAVGSMDGHLAVWRLNGTRVRLELTRPKKSAAVTPTAPHSAAVPMTRSLSGPPIQSRPQSPAPGSAGSAATPAVNTLIPRPRNPSQAPAASTNTHIQGGNNAGKDAPPRSKTHHQQQHSHASNNSYNAHSQGNNAHSHGHSNSHAHTNGTLSAPSSASLFPPLSTTATAAPVAASSAWSKPLIAKAPVGAPAATVAAVAAVQRHEEKRHIGIGYATQLSEHLHLWFTLIDNARFTSLAFSGDAMLLAVGLWDGSVTVYRRSCTQQPQSSDGSEGGAGSDRAGGDAHQSRDERVPLAKDVWSADEGLTISATVKSVGSHPGAHVCWLSVASSSSHDAGIERVLAVGRWPPCTASSSVHLYTLDRDGQWTPPPDAEAAEWRPTPAWTDDLATACVRGMCVVRPPLLCPPLLQPVDAQQKEKETTAAVTNADTRSPSDSVLYCLADGQLGLARIPHISRDGVPMRHVLSAGSRGCVWLASGRRRLAARCPLPPRVVAEFSVASAFPPDVSATLVVHWRERQTHPPADHVTRVSACGCHENVVEVPFADDVDFCRLGNAVTREDHDGEGSSAFVDSDAPVSSSSPCNGLGVRSVDVCDGRRLFLWMPFLAVVFDANSGRWDRVFLPADVVACVLICEGAYVVAVTSTLRVGVWTLNRHQTERPMEPPVWHALRGAAGIARNTPDSNGSHNSRNIPVVMETPRGSLAVFASPSENALTVWTTSRVMCKESTAATAMDLHFNARTLSLRKEHCARPVLMPTDNVVLLAVDPASGDVAAELKGAACKDASPAARSTRQYIAAIPGHDVIKFIDAPSNLFPDEVASLHAKSISALDALAHALQSS* # ORIGINAL: g7410.t1 original gene structure, not modified by PASA NODE_819_length_17334_cov_41.3358 AUGUSTUS gene 154 963 . - . ID=g7410;Name=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS mRNA 154 963 . - . ID=g7410.t1;Parent=g7410;Name=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 864 963 . - . ID=g7410.t1.exon1;Parent=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 864 963 . - 0 ID=cds.g7410.t1;Parent=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 655 748 . - . ID=g7410.t1.exon2;Parent=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 655 748 . - 2 ID=cds.g7410.t1;Parent=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 154 362 . - . ID=g7410.t1.exon3;Parent=g7410.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 154 362 . - 1 ID=cds.g7410.t1;Parent=g7410.t1 #PROT g7410.t1 g7410 MEPLKDDDAVSSETPISCVNTSGFGGSAEGGDNGDFDLRSPSDRKRSLEEDDEWETGTTADGDPSGKRPAKKTKVYKESHNAIEKRRRDKINQCIQELSSIIPGCVTTDQKADKSTVLTMAVGYMKKLVSGSGG # ORIGINAL: g7414.t1 original gene structure, not modified by PASA NODE_819_length_17334_cov_41.3358 AUGUSTUS gene 15119 17186 . + . ID=g7414;Name=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS mRNA 15119 17186 . + . ID=g7414.t1;Parent=g7414;Name=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 15119 15172 . + . ID=g7414.t1.exon1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 15119 15172 . + 0 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 15463 15655 . + . ID=g7414.t1.exon2;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 15463 15655 . + 0 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 15915 16051 . + . ID=g7414.t1.exon3;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 15915 16051 . + 2 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 16298 16374 . + . ID=g7414.t1.exon4;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 16298 16374 . + 0 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 16637 16737 . + . ID=g7414.t1.exon5;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 16637 16737 . + 1 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 16907 17012 . + . ID=g7414.t1.exon6;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 16907 17012 . + 2 ID=cds.g7414.t1;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 17180 17186 . + . ID=g7414.t1.exon7;Parent=g7414.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 17180 17186 . + 1 ID=cds.g7414.t1;Parent=g7414.t1 #PROT g7414.t1 g7414 MASLLMRGFLIRKLMEDTGGKTQDEIDYEDILEDQAGESSHKHNSISLLIMCILLMLTTLTVWMFRIRKFRYLHETGMSIIYGVVAGAIIRSIPNSAALQEKAVYDPEIFFFVLLVPIIFNAGYDLKRRNFFRNITGIMAFALIGTTIATFVTGGLMYAYVQSGTEDLPINGVDCFLFGALISATDPVTVLAIFHDLRADVDIYAIVFGESILNDAVAIVLYRG* # ORIGINAL: g7411.t1 original gene structure, not modified by PASA NODE_819_length_17334_cov_41.3358 AUGUSTUS gene 2142 5657 . + . ID=g7411;Name=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS mRNA 2142 5657 . + . ID=g7411.t1;Parent=g7411;Name=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 2142 2437 . + . ID=g7411.t1.exon1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 2142 2437 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 2564 2822 . + . ID=g7411.t1.exon2;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 2564 2822 . + 1 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 3019 3189 . + . ID=g7411.t1.exon3;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 3019 3189 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 3475 3574 . + . ID=g7411.t1.exon4;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 3475 3574 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 3948 4183 . + . ID=g7411.t1.exon5;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 3948 4183 . + 2 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 4719 4859 . + . ID=g7411.t1.exon6;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 4719 4859 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 5121 5237 . + . ID=g7411.t1.exon7;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 5121 5237 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS exon 5418 5657 . + . ID=g7411.t1.exon8;Parent=g7411.t1 NODE_819_length_17334_cov_41.3358 AUGUSTUS CDS 5418 5657 . + 0 ID=cds.g7411.t1;Parent=g7411.t1 #PROT g7411.t1 g7411 MSGLSGAVTRWGGQLRCRYLQTLRGRLAGIHTSTALPRPTAAMGRGTPCQLQQWGLVRSSPELTRSGRRFLSSFGASHKTHSQGPLAEYDARVDAGALRVDEYQRKIVAELQALHDNLRHYTPTPVPEESSPTTMFGSIVSLISGRKSVEEPSYGPQGLYLYGDVGCGKTMLMDLFFDQSPIKLKRRVHFHEFMVDVHTRIHRWKKSITEEEWQTSDHLDPIPPIARDLADQAWLLCFDEFQVTDIVDAMILKRLFGALFNRGVVVVATSNRQPDDLYKGGLQREGFLPFIKMLKQRSRVLCLDSGIDYRKALKASGSVYHVPVNAGTDKLLSDMFNRLASVEKKGETALFGRPPMSAADYLEIAKSFHAVVLHGIPRMQMAQKDSAKRLINLIDALYDRRVKLICSAECAPSDIFRVNAKDGHSFERQRLMADELGLSEAQAKQTSIFNADDEIFAFERAVSRLTEMQTQDYLDEKHLGGHHESHNHPHHHHHHHHNKHESHPKGAATGEGEGHVATS* # PASA_UPDATE: g7413.t1, single gene model update, valid-1, status:[pasa:asmbl_9528,status:12], valid-1 NODE_819_length_17334_cov_41.3358 . gene 11934 13553 . - . ID=g7413;Name=g7413.t1 NODE_819_length_17334_cov_41.3358 . mRNA 11934 13553 . - . ID=g7413.t1;Parent=g7413;Name=g7413.t1 NODE_819_length_17334_cov_41.3358 . exon 12933 13553 . - . ID=g7413.t1.exon1;Parent=g7413.t1 NODE_819_length_17334_cov_41.3358 . CDS 12933 13553 . - 0 ID=cds.g7413.t1;Parent=g7413.t1 NODE_819_length_17334_cov_41.3358 . exon 11934 12795 . - . ID=g7413.t1.exon2;Parent=g7413.t1 NODE_819_length_17334_cov_41.3358 . CDS 12094 12795 . - 0 ID=cds.g7413.t1;Parent=g7413.t1 NODE_819_length_17334_cov_41.3358 . three_prime_UTR 11934 12093 . - . ID=g7413.t1.utr3p1;Parent=g7413.t1 #PROT g7413.t1 g7413 MAARYHPAAAAGAVLAVAGAGGGFLGRSKCACVDLYKPAFLPTLADLLQNDEDAPTRARRKRIHGFLVDEGILPPSYANLATAALEEDAGCNVAERTHAISAAKERHRENRKNRPVKWRQESDATTAFVMLLSETGERCSVELRDEFGARSLTLPSGWFVERRRGRSRDGIEEKLLFCFVHPSGEIDRFENLSSVEAFILSQGTNKATPQLHDDMNEKTPATTKSVVWNRDDLAVFRATFADKCDEADILSGRTRALIMNAESMQEELSRANTAVDAHMRAVKELRADLESTRAAFELAEKARKDAVRMREMCERQINVSVQRATEEAAKSAEAAAETVRLRDEIAMLTRQVAREKELRRRVAHKFDAGLDAERRERESVVAAYEQKLAAERTKSEALSVAVSQLKLHFASLPSKRAVPRDPTTVGVGVGMGGVRAGVHR* # PASA_UPDATE: g12732.t1, single gene model update, valid-1, status:[pasa:asmbl_7079,status:12],[pasa:asmbl_7080,status:12], valid-1 NODE_4197_length_2037_cov_27.6259 . gene 1 1958 . + . ID=g12732;Name=g12732.t1 NODE_4197_length_2037_cov_27.6259 . mRNA 1 1958 . + . ID=g12732.t1;Parent=g12732;Name=g12732.t1 NODE_4197_length_2037_cov_27.6259 . five_prime_UTR 1 54 . + . ID=g12732.t1.utr5p1;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . five_prime_UTR 483 513 . + . ID=g12732.t1.utr5p2;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . exon 1 54 . + . ID=g12732.t1.exon1;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . exon 483 726 . + . ID=g12732.t1.exon2;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . CDS 514 726 . + 0 ID=cds.g12732.t1;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . exon 1095 1298 . + . ID=g12732.t1.exon3;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . CDS 1095 1298 . + 0 ID=cds.g12732.t1;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . exon 1498 1620 . + . ID=g12732.t1.exon4;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . CDS 1498 1620 . + 0 ID=cds.g12732.t1;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . exon 1833 1958 . + . ID=g12732.t1.exon5;Parent=g12732.t1 NODE_4197_length_2037_cov_27.6259 . CDS 1833 1958 . + 0 ID=cds.g12732.t1;Parent=g12732.t1 #PROT g12732.t1 g12732 MASLLRSSALAGVARAASMRGLVAPATSVVACRYNSTCSTKSSESAIATLIKEKLGSTGVVTLTAGVLAFLVSKEYIVFHHETVLVGTFSTVVYGLYRAMGDSVGQSLDARIEQIRQNLNSARVQERTAINEEIAALASIPNIEEFNKLQFDVYRELNTLTNEIARREAEAEFYRDIKFKLDTLVKLRNENRRREQERIVSLVTSQIGGGLTAAQVGWTVQ* # ORIGINAL: g8160.t1 original gene structure, not modified by PASA NODE_804_length_17516_cov_41.9029 AUGUSTUS gene 15048 15842 . - . ID=g8160;Name=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS mRNA 15048 15842 . - . ID=g8160.t1;Parent=g8160;Name=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS exon 15733 15842 . - . ID=g8160.t1.exon1;Parent=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS CDS 15733 15842 . - 0 ID=cds.g8160.t1;Parent=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS exon 15468 15538 . - . ID=g8160.t1.exon2;Parent=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS CDS 15468 15538 . - 1 ID=cds.g8160.t1;Parent=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS exon 15048 15214 . - . ID=g8160.t1.exon3;Parent=g8160.t1 NODE_804_length_17516_cov_41.9029 AUGUSTUS CDS 15048 15214 . - 2 ID=cds.g8160.t1;Parent=g8160.t1 #PROT g8160.t1 g8160 MGKRAARKPPPKKTATPLDKTFACPFCNHDRSVEVKLDKQRKIGSLRCNVCSAAYQAIIHSLSAPIDVYSEWHDACEEVNANAAGGVERGGRRDNGDKDDDDGIALGRREDDYDD* # PASA_UPDATE: g8159.t1, single gene model update, valid-1, status:[pasa:asmbl_9476,status:3], valid-1 NODE_804_length_17516_cov_41.9029 . gene 12288 14611 . + . ID=g8159;Name=g8159.t1 NODE_804_length_17516_cov_41.9029 . mRNA 12288 14611 . + . ID=g8159.t1;Parent=g8159;Name=g8159.t1 NODE_804_length_17516_cov_41.9029 . five_prime_UTR 12288 12374 . + . ID=g8159.t1.utr5p1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . exon 12288 12621 . + . ID=g8159.t1.exon1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . CDS 12375 12621 . + 0 ID=cds.g8159.t1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . exon 12761 12900 . + . ID=g8159.t1.exon2;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . CDS 12761 12900 . + 2 ID=cds.g8159.t1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . exon 13190 13598 . + . ID=g8159.t1.exon3;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . CDS 13190 13598 . + 0 ID=cds.g8159.t1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . exon 13943 14611 . + . ID=g8159.t1.exon4;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . CDS 13943 14172 . + 2 ID=cds.g8159.t1;Parent=g8159.t1 NODE_804_length_17516_cov_41.9029 . three_prime_UTR 14173 14611 . + . ID=g8159.t1.utr3p1;Parent=g8159.t1 #PROT g8159.t1 g8159 MVAPRKRKAPVLDDDGADAYTMDTSAHNTSASVTFESAERLSGGVARTPEKMGAASPAKAEKMTPDEAREKLTCLLDEFDAEVEGRCDRMRVFLRALVLSLKKDFAVELIRLPKSVRSMPIEELMSSNMTVPQSVAANHVVGIVSRMGAAASSSPLRDITNASSAAAEPGTAAKRRRIAASKQSQQPQPPSTVEMSSRRSARTVSALVAQTPTAASTRKVTPAVEATPMRAPGHFPLTIVQTPHAGNATVACTPRVGGVQQTPATGRRALRRGETAVTSNGSPVEGHNAPLLSIPVREGGAIEVDTMQGQVFIPREMSKAAIKESILNTQKMLESLLAQMA* # PASA_UPDATE: g8161.t1, single gene model update, valid-1, status:[pasa:asmbl_9477,status:12], valid-1 NODE_804_length_17516_cov_41.9029 . gene 16291 17246 . + . ID=g8161;Name=g8161.t1 NODE_804_length_17516_cov_41.9029 . mRNA 16291 17246 . + . ID=g8161.t1;Parent=g8161;Name=g8161.t1 NODE_804_length_17516_cov_41.9029 . five_prime_UTR 16291 16526 . + . ID=g8161.t1.utr5p1;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . exon 16291 16554 . + . ID=g8161.t1.exon1;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . CDS 16527 16554 . + 0 ID=cds.g8161.t1;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . exon 16675 16722 . + . ID=g8161.t1.exon2;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . CDS 16675 16722 . + 2 ID=cds.g8161.t1;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . exon 16822 16918 . + . ID=g8161.t1.exon3;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . CDS 16822 16918 . + 2 ID=cds.g8161.t1;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . exon 17038 17246 . + . ID=g8161.t1.exon4;Parent=g8161.t1 NODE_804_length_17516_cov_41.9029 . CDS 17038 17246 . + 1 ID=cds.g8161.t1;Parent=g8161.t1;3_prime_partial=true #PROT g8161.t1 g8161 MPTGVLTVTLAEGSNLRDMDVFTKMDPYCFVSLGSNKQRSRTHHFGGKNPSWHQTFTFNVSEGMDKLHLEAWDEDTVRDDFIGWAEIPLYPAFQSYTNDGWHNIVTQTNRGAGKIHLVLNFRPGAVP # PASA_UPDATE: g8158.t1, single gene model update, valid-1, status:[pasa:asmbl_9478,status:12],[pasa:asmbl_9479,status:12], valid-1 NODE_804_length_17516_cov_41.9029 . gene 2416 11560 . - . ID=g8158;Name=g8158.t1 NODE_804_length_17516_cov_41.9029 . mRNA 2416 11560 . - . ID=g8158.t1;Parent=g8158;Name=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 11408 11560 . - . ID=g8158.t1.exon1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 11408 11560 . - 0 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 8004 11124 . - . ID=g8158.t1.exon2;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 8004 11124 . - 0 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 6330 7639 . - . ID=g8158.t1.exon3;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 6330 7639 . - 2 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 6085 6131 . - . ID=g8158.t1.exon4;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 6085 6131 . - 0 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 3699 5868 . - . ID=g8158.t1.exon5;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 3699 5868 . - 1 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . exon 2416 3328 . - . ID=g8158.t1.exon6;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . CDS 2855 3328 . - 0 ID=cds.g8158.t1;Parent=g8158.t1 NODE_804_length_17516_cov_41.9029 . three_prime_UTR 2416 2854 . - . ID=g8158.t1.utr3p1;Parent=g8158.t1 #PROT g8158.t1 g8158 MDPFDPDFIEPTTRASADTVILDEGLTNYDLTDEDLYEYGECIGMTFPEDEEFLWIAEEGLRAPCPPDWKPCQSPDGEIYYFNFKTQASMWDHPADMHYRRMFEEAKMKKKAERANAPPSPFPAHPAKEQTAPSIAADAKRVQPDSESDAEEEEEDNDDGDGAGSAERQASVGVSAIPHVAPGSLSAKGAHATSAPAAHSPRHMVDSEDSPSLSSAAPRTKVVPGEPTKLVVSVPSAPSASDLDESIDEDMDEVDEGGDDDNDDNDDDVSRDSSNKPSKASDVASSANRGTREPNAGSLVVGKSGAANSVQKSPKLSPKSDAATIYSDDDDDEKGEGSESDGVSGGAIRGGLGLRRDDPQRSASKSPRGHVARLLSGGKDGDSDDGSSDIVESPLKMAISKVSTMSDGKSPAQKRLFEREDDADSDGESIHSVSHEPTEHEDKPHSASASHGEDKAKAAPASSALPKRDSSASEDIEEEYTEEFEDDGESDRGSSRRSSAASSANNSVPNSPSPRKGGAPPAGLKSPSLRASKMDAFDEVDEVSRSEASEAAVAEGQKEISTSPSPSGAARPNGPIPQISVSLPDDDDKPHSEKSESEKVLSRRVGDAAATVAPLSPAGNASTVDESVGEEEDASIASEKSSDVSESPRAQQQQIQVATVAKVHAAIAIPEINVNSASSIGSGNSESDPDSERLDDASDKRGGKTATSDAVGIADADVAGGDQTSATAPAVHGPGEVAQESATGNNGKPSLARDQRVVGSDDVVDVDDVDDVDEDIEESVDEEDGSSEHSEDSHSAAEVHAPVSSTKHDAVLSQLGSGDAATKAVVDPPATSIGSPANPTEEPKEAREGFDGGGEDDRSDVGDGDNSDGDDESHDAHDDAHDREDDHEDHKDEKADENDGDGKVRDDYDEDNEDYSVHSDASERSHEGDRADTKAAVASASALASTPSSGTATPKLSRESSLPRPTREDVAQGANKASHGVSPAQSPAPVRRASVGASSALARKGVATAMSPSNSPSAGRKVTGPASAKPLTGKAGVTVGNKGGAPGGSVPRAQTTQPQKASATHAVGAQALNKSGSGSSVGSTTPKKSPAGKPNASAAGHTNTPSKHAPVPKATSTSAKATSKSETTAAAINKAGTKGAPVSSAAKPHVADGVSAGVEAAHSEEHDPHMASAIATDTTHPASTASTATAVNAHTADQEEPNLVRPTGVVSAEISPPPVELPAVDTQRLRDEIAAIEAEERVRIENEVAGSRDAWTEKLLAFDAEQRRQIEEEANAELSLAKERTAGELARLQKQYTDEVTRVAAELEVRVREERASVELRVAEEAKRVDALLASERERLAHGLSEIARESEMSGSVGHSLADKVTAAQTEAEEALRKLRAEHSAMLAAELDALSVSHASEIDSASKLHAEEVSGKSKTHASELDGLSKAHSVAVAQFNVSHADALRKIRAAHAQELEAERQSLRHAREVELDALRAAFERENSRLTELLERSKTELAVEEAALAQRKSTVEKESRMLTEKATALQAKLEAIDSKARSDVDERSASIKRQPEFSRQQSEAEARLDSVRAQLEGVESALEGKRRQLLDDERKASTLRADNEFLQRQNETLARELESVKAHLESATKERLANAARDAQKRDEMSKERDTLMLERESLATDKGSLSREVASLRAQKEGLLSEVSSIRTESAEVAREAERVSREKKAVAAERDEAISLRDAAIREKASAVQLRDQAVREKDNAVRERDEAVKALADAQAALASASVSNATNPAAASLLSSSGTPTHFADLRIASEELGRLQRSRDSVEREIRDMRTSSEREMDTLRADRRSVSVEVESLREERSKLSVDIATLRSERNSLMAELPVLRADKASLLADLTAARQSLRETAQQAREAQEDASRSSSDAIAAARKLAECERDIARVQEQHQRLLEQVAAREESQHAMDAKGRAKGSTLRTQSSMQGARADSDDAQTDGHVDADVDVPFVEPLKQEKLVSARRPPSAPAMETARPPSTPLVAFEEVLEGKLREQEERSTQKLNGMLEILQNQQKQLQEQQRLLEDGQRGRRDGDRGNSRDRDRDRDLDRDDDGDGRSPPSGSRRSQGRPFSSGNEAHGRSARHDEDGDGDIRYIDNNVHVGGSRSGGHRGEGRRAGGAASGGKQERGTSPLSRTVEMGAQADPSQLHSRDAYYGDYAPQPPSSYPHPPTARPSSRGRTPTRYYGRPHTSEMPSDRSSYVNRASPSSFGLSYDDHASVADMSRMKREQNDYLSRAQVYLEELHQRLTTSTVSTPFGPIPRGGPTGTSRDGHPQSTLYHSQYENNNNNNSINGSSYTGARDSASSERWAMMHRPMPVFATPYLGAPPSSMSAPGTSSGRSGSAFYVAGGTSQAVSSSVQGHADWLRGFKGAHVTPATHLLRPPSAGPADAAHRG* # PASA_UPDATE: g8157.t1, single gene model update, valid-1, status:[pasa:asmbl_9475,status:12], valid-1 NODE_804_length_17516_cov_41.9029 . gene 504 1909 . + . ID=g8157;Name=g8157.t1 NODE_804_length_17516_cov_41.9029 . mRNA 504 1909 . + . ID=g8157.t1;Parent=g8157;Name=g8157.t1 NODE_804_length_17516_cov_41.9029 . five_prime_UTR 504 572 . + . ID=g8157.t1.utr5p1;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . exon 504 653 . + . ID=g8157.t1.exon1;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . CDS 573 653 . + 0 ID=cds.g8157.t1;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . exon 1015 1096 . + . ID=g8157.t1.exon2;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . CDS 1015 1096 . + 0 ID=cds.g8157.t1;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . exon 1594 1909 . + . ID=g8157.t1.exon3;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . CDS 1594 1631 . + 2 ID=cds.g8157.t1;Parent=g8157.t1 NODE_804_length_17516_cov_41.9029 . three_prime_UTR 1632 1909 . + . ID=g8157.t1.utr3p1;Parent=g8157.t1 #PROT g8157.t1 g8157 MSLPQRQDSFLSDVATRMDLDVDLDFEGGQGSLLMEHDAPVIVDRSVVHADFFKAFPDDFDDDDLS* # ORIGINAL: g11343.t1 original gene structure, not modified by PASA NODE_3980_length_2408_cov_60.865 AUGUSTUS gene 2 2252 . + . ID=g11343;Name=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS mRNA 2 2252 . + . ID=g11343.t1;Parent=g11343;Name=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS exon 2 1005 . + . ID=g11343.t1.exon1;Parent=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS CDS 2 1005 . + 0 ID=cds.g11343.t1;Parent=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS exon 1224 2096 . + . ID=g11343.t1.exon2;Parent=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS CDS 1224 2096 . + 1 ID=cds.g11343.t1;Parent=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS exon 2225 2252 . + . ID=g11343.t1.exon3;Parent=g11343.t1 NODE_3980_length_2408_cov_60.865 AUGUSTUS CDS 2225 2252 . + 1 ID=cds.g11343.t1;Parent=g11343.t1 #PROT g11343.t1 g11343 ISSKEAEVTSVREEIASVEARAVAAEGRVSELESAIGALESEVSCLKEKGARDDASIAELRASFERNAGETAVELQTRTEALGVAEEKIRVLESEVLTAQGAISSKEVEVASVREEIASVEARAVAAEGRVSELESAIGALKSEVLAAQRAISEKEVEIASVREESPSVEARAVAAEGRVGELERAIGALESEVSRLKEKGQRDDASIAELESRLERWADPGQMDALHSDLESARSDVVRLEASLATLEGDNASLLLEASGLRAGQDAAVQAAEVLRSHSDVLASRELQLVSEVEAMRAEIARLSGELELATERIAAETERSKNADDSEVEELRGLLAARGVALDSAAADVEILEQALAREKSERETLAAEYEARIAVLTGRPRDTSPPSHRRPSSDPAAPDVALILRSKDAEIWLLKEQLQSRDDAAAGFKAERIRLERDVEAARARETQLAGDVQRLAADCDRYQRQLDAVGAGLHDGALAEGHGARVDDDGALGGQVDLTGSLPDGALVDRLVEAERRLRVSEGQVSFLNSVIGELQTKKQQAHHILARLQSQYDGPSAAAAAKDATPRRAPRMFCDICGVFDAHSTTDCPETMIETALDASRSKAGAGVVSSRPYCTVCEGEIWTYEGRV* # ORIGINAL: g9410.t1 original gene structure, not modified by PASA NODE_3165_length_4135_cov_33.4734 AUGUSTUS gene 95 4086 . + . ID=g9410;Name=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS mRNA 95 4086 . + . ID=g9410.t1;Parent=g9410;Name=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 95 858 . + . ID=g9410.t1.exon1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 95 858 . + 0 ID=cds.g9410.t1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 1216 1681 . + . ID=g9410.t1.exon2;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 1216 1681 . + 1 ID=cds.g9410.t1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 1954 2140 . + . ID=g9410.t1.exon3;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 1954 2140 . + 0 ID=cds.g9410.t1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 2523 3385 . + . ID=g9410.t1.exon4;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 2523 3385 . + 2 ID=cds.g9410.t1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 3602 3737 . + . ID=g9410.t1.exon5;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 3602 3737 . + 0 ID=cds.g9410.t1;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS exon 3989 4086 . + . ID=g9410.t1.exon6;Parent=g9410.t1 NODE_3165_length_4135_cov_33.4734 AUGUSTUS CDS 3989 4086 . + 2 ID=cds.g9410.t1;Parent=g9410.t1 #PROT g9410.t1 g9410 DEATLHQAGVTSEPFDDADDDDAHSEVTGLSELLALDRRDFTLMGFGGLKPDTASAHVTGLSHVIASPKVARAAPATTLGSLPTAVNANSADASLPPVGDMPPNSDASRRESTVSGLFVSGRSLWRTITLGSHERVNVQLDEIGAERQTDVDIFSEGSLWIRYFDIGRLLAVMGLIAPPSSSGAVARGLWQLHRAIVLFILCAIVLLMGVRFLWKGYAQTDANGTVIHLVMLNLAVDGALSYIVLMHLDPCLPFRSMDQFMGACRRSFYERLARIRRRSFTTHMIMFVLTISAWCTAIVGQVRFFDDERASEVNSVVSSIREERDAYLQAAVTGGTNATTACNALSLAYNSSAACVQTLLDLAALADVRVGTVLDHAAHTDPYLSYFESDSWVSLISNSSLNIALAVLAAVLPTLSSLGSTEYLFTIYHMCSGLARNVIILINARSRVRNAAASGEGGDHVTRRVSNATGPSGYMRRISTASRKESYAGRKSSLGLGMLPSRKSSSSNSAHSVPSSISVQSRKSSLMSRKESSADSIGGDLRHEPSFLGDMPASGRRTSTTSRKVSGLRMDGDSTRKLSQVSSHRSSGAISRKFSSVDMHGTGGPRKESLLSVHRKESGVSGQRKESILSLQRKESSTSFAVPRKDSVGLSVSRKGSTSSRMGASHGGSTEDALWRGGLPVSPIGDPSARRASAMSTHYNRRISTMSAKTSVGMGPSDGEAAAYYMSHARRASIMSTVSMATPEESVSTFATGSVARIFEDDGVRERFYLLLADTLARTKWNVVFFVTFRFLGLIGCICGLSTTHGTRPLFLWTYCCAILMWTLALFNATRSEAIGE* # PASA_UPDATE: g9607.t1, single gene model update, valid-1, status:[pasa:asmbl_4731,status:12], valid-1 NODE_2653_length_5542_cov_37.7746 . gene 191 4423 . - . ID=g9607;Name=g9607.t1 NODE_2653_length_5542_cov_37.7746 . mRNA 191 4423 . - . ID=g9607.t1;Parent=g9607;Name=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 4331 4423 . - . ID=g9607.t1.exon1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 4331 4423 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 3851 3956 . - . ID=g9607.t1.exon2;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 3851 3956 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 3213 3293 . - . ID=g9607.t1.exon3;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 3213 3293 . - 2 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 2820 2922 . - . ID=g9607.t1.exon4;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 2820 2922 . - 2 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 2413 2629 . - . ID=g9607.t1.exon5;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 2413 2629 . - 1 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 2146 2252 . - . ID=g9607.t1.exon6;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 2146 2252 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 1824 1902 . - . ID=g9607.t1.exon7;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 1824 1902 . - 1 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 1592 1718 . - . ID=g9607.t1.exon8;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 1592 1718 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 1214 1353 . - . ID=g9607.t1.exon9;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 1214 1353 . - 2 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 857 997 . - . ID=g9607.t1.exon10;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 857 997 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 571 691 . - . ID=g9607.t1.exon11;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 571 691 . - 0 ID=cds.g9607.t1;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . exon 191 327 . - . ID=g9607.t1.exon12;Parent=g9607.t1 NODE_2653_length_5542_cov_37.7746 . CDS 191 327 . - 2 ID=cds.g9607.t1;Parent=g9607.t1;3_prime_partial=true #PROT g9607.t1 g9607 MASTPNGAATPNTLRRRRLSSFEDRPVQFVTVDDDGKFVMQDEAVEFLSAMTGPIAVVAVAGLYRTGKSFLLNCLLDKQRGFEVGPSVKACTKGFWIWGKPVKYGDLNVLFIDSEGMGSTVKDQNFDSRIFSLAILMSSYFLYNSVGSINENAINDLSCIVNLTKHIHVKAKIQGEDDDGSDFAEYFPAFLWVLRDFALQLVDDNGAPITSKQYLEHALSPQVGYSDAVSSKNRIRSMLTHFFKERNCITLVRPLAEEGDLQRLGTSSSEQWRPQFASSIETLKRLLKDEVRPKILHGKAITGPMLVSLVGSYLEAINSGSVPTISLAWDNVVEIECRNAVESSLDLYKHEMSAIAKAIPVSVDDLKSTHREAKRKAFAVFEEYAIGDYKNKFREKLKVAISSEFGNLSERNVATSKSLASSVLTSLWEAIKARVGEQGHSHPSDFIGDIDGLTREYRLKVRGPASDHVLLQFVDGKTRDFLHT # ORIGINAL: g10363.t1 original gene structure, not modified by PASA NODE_1215_length_12971_cov_40.8261 AUGUSTUS gene 10724 12298 . + . ID=g10363;Name=g10363.t1 NODE_1215_length_12971_cov_40.8261 AUGUSTUS mRNA 10724 12298 . + . ID=g10363.t1;Parent=g10363;Name=g10363.t1 NODE_1215_length_12971_cov_40.8261 AUGUSTUS exon 10724 11932 . + . ID=g10363.t1.exon1;Parent=g10363.t1 NODE_1215_length_12971_cov_40.8261 AUGUSTUS CDS 10724 11932 . + 0 ID=cds.g10363.t1;Parent=g10363.t1 NODE_1215_length_12971_cov_40.8261 AUGUSTUS exon 12134 12298 . + . ID=g10363.t1.exon2;Parent=g10363.t1 NODE_1215_length_12971_cov_40.8261 AUGUSTUS CDS 12134 12298 . + 0 ID=cds.g10363.t1;Parent=g10363.t1 #PROT g10363.t1 g10363 MSSNDRPTKIRKVEEADGEIHGGSVNNSTGATGRSVGGCPFLAANPSATLSVPQPQQTLSGNRRLPSASPFLVEQRVLQSVLDLASDAIITIDITGIVLSFNFAAEKLFQFSAGEVVGSNVSMLMPSPYCEEHNSYLRNYLGTGVPRVIGIGREVQGMRRDGSIFPMELSLSEVKNETTHLFTGIIRDITERYELQRRLVCERQEYQAVLDTAIDAIIIISTTGIIQSINDAGVRLFGYESDEVVGKNISTLMPASHAEAHDGYLRRYLATGERRIIGVGREVEGRRKNGTLFPLELAVAEVKNETVHMFTGFCRDISQRKAIERSMLEETRKLKGVFESCIDGIVIIDSTGIIQSMNESASRMFGYARDEIVGSNVSRLMPSPHAERHDGYLRKYLETGVKKIIGVGREVEGRDKSGRVFPIHLSVSEVDLGESGRLFAGVVRDINNTSRDIMLRW* # PASA_UPDATE: g10362.t1, single gene model update, valid-1, status:[pasa:asmbl_833,status:3], valid-1 NODE_1215_length_12971_cov_40.8261 . gene 288 9762 . - . ID=g10362;Name=g10362.t1 NODE_1215_length_12971_cov_40.8261 . mRNA 288 9762 . - . ID=g10362.t1;Parent=g10362;Name=g10362.t1 NODE_1215_length_12971_cov_40.8261 . five_prime_UTR 9628 9762 . - . ID=g10362.t1.utr5p1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 8512 9762 . - . ID=g10362.t1.exon1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 8512 9627 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 8014 8181 . - . ID=g10362.t1.exon2;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 8014 8181 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 4125 7628 . - . ID=g10362.t1.exon3;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 4125 7628 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 3837 3935 . - . ID=g10362.t1.exon4;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 3837 3935 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 3385 3603 . - . ID=g10362.t1.exon5;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 3385 3603 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 3055 3144 . - . ID=g10362.t1.exon6;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 3055 3144 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 2710 2886 . - . ID=g10362.t1.exon7;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 2710 2886 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 2356 2533 . - . ID=g10362.t1.exon8;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 2356 2533 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 1962 2032 . - . ID=g10362.t1.exon9;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 1962 2032 . - 2 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 1508 1630 . - . ID=g10362.t1.exon10;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 1508 1630 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 1220 1344 . - . ID=g10362.t1.exon11;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 1220 1344 . - 0 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 915 1022 . - . ID=g10362.t1.exon12;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 915 1022 . - 1 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . exon 288 672 . - . ID=g10362.t1.exon13;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . CDS 486 672 . - 1 ID=cds.g10362.t1;Parent=g10362.t1 NODE_1215_length_12971_cov_40.8261 . three_prime_UTR 288 485 . - . ID=g10362.t1.utr3p1;Parent=g10362.t1 #PROT g10362.t1 g10362 MSDDTLRNRLAVRRKALRESLRSSFLTTGEGNGDALATSVSSEQPEYSNAHDATYEGAPFDETQYGESDDGHEDAADAQSTAPYMAPVANPPAPLQQQHQEAAAPPPGLASLGGRRSSLHSFRLPPVSTPGDAPETAPSVRGAERRRSSADAPPIAIVIDHVDDDEAPPETAPPVKTAKGRASRGGNVRQPPRPQFDAMTSPAEPVQAAAPVQEYSTTAVDMDAPIVTRRRRSKGLRSFVAAEGAERGASGRDDGAGGEVSPPTPDENADPALGDSFASQQQREAAAGSLGGLSDRIAARRKRFQEEFPMENIGQMDDGSAVEDESGAAGARSSGNEAGLSDAIRGRLEWKKRVMHRRELSNATESPDAALESSKGPERLLRGRRTRHRATRFDQTGGEETLALSQSTASAMFGRSAAMGSAALLNSQSNLNSSRPAGVMRWQAATSQVRQTVQQAKREAALAPTADESLAFFIAEDAYPDYVNEEDEAQQQQPEGHVVVDTDGQAAEGSAQAVQVQEDGDGVVLGDAGEDSAAAMALREVTGLTWEADFTFDARPEMFSTTKQRKAFRSHLYVVASTPSPMEDRLFVGGAAGTLADEGDGGERGLKRATPRYVEDEGLYVGMRPNMTSWNLNRVENRLLMEGLRSKGWFGEDGHLVSLPDPLRKVASRAPAVDMPFDGRPFEVVHVPGLPRVPGAPYPTEPSTGAGDADSRFQLSIDVSGLQFEDHPLFTREHVLAAELNAMYARYIDRRKEASVDYLNDRMVALREAAHHIWGELKREGILESESGRLKRMRREYLREMRLTRQKRDSEEHADIQLVEGMAAVWMKIREERERTGVSATPVRLRVAKIPADNERDRERLANDLEDEIAEARADYDAEYEMRLEEHARIVAEIENARRARLAKGAISGGVASAGPRRIVEGTVYEKSDKQPLSTSHASKGGRKGKRRVSTATEESGDDGDDGTNASVVGGPSIAAATTTSSRPAAEETASLLAHAEDADEARMGDGTDAWDTAAAATSDEAPPPPQYAFDPEEVRAVAREAQRELRRRPGEPELIPEVSDSHAVTPTDECPPLEVKRRAAVQAYACHARLMFNGKEVARTETRPLSQDFSVYFGEVFDLQVRKWPESLAIQVWEAGTAVDTHLADVFLNVPGIDSHVENTKPEDFEFGSDRRVVYDWDHNPESIHPHVRYLRGCVTAAAAWGVDEDDGTARAPPHPPPSQAVAVVAGGTSATNPNARYDALAALGATGMVNIHKLCEWVRESKLDPNDPRNASLLHLMQSYPGMDGGKGGIDGHFRLKELERECEFPDAMIYTSKRYRLLMLRRDGLPEFRTLKQIPLHEDEIDSAMLQGISPEEQARVAREKEAADAADKGLDPSARESSDFLRSVRSTMLVRFRNAKPLTSLHDVVIEQPLPNIKIAFGTLKRFLAPRRPLRPQRRERKKLATQTPESVHIIIRIVRAFNVPVRTPSNSTNGASSATQQALPFGAGNASGAGVGGASGGGDAGETAESALAAASIAPLLIDSMSGAVRPYVEVRFQGDVRRTYVSDGPNAQWNEELSLSFAAPDDDYSPQSLSGVDDKVYFNLFDEVVVDILRDDRQRDTNIHQRLERRWLGSLSLPFSTIYQNGRVDGTFQMESPVVLLGYERARTRQTAASLGIPVGDNAEYDGNELDDSLSNTKTFVNFFVTIEPPLKQAKPIRERLPSNEERRLLQYASYWTSMLQSKQSHRIFKTTAVDISGRLVFICRYIRPQAPPPELASERKIARFVSLIPSLNDAVTFTGDCDLWNTSDQFLDMLAGDEEEHAILLCNYFLDLGLEAYVVVGNGIPEGQTSYVLTKERGKYRLWNACTGVSYRQHDTNCPLLEVGCIFNDKNIWANVQRYAEPTRIDFDLTNAKNWTPFFSRKFPFPGLSSVQVDRLRYFPTDPSLVLQLETSIEKTLCAKMEEWRERFVTRWNRHCNRAFKAILPRFEELRNTVDVAQQSELTDILRSYALNGFPVNITWTDMRAVVDAVRNTGVHFSEDPTVEFALAVHVCPYPNNVISVWVYVATLVKK* # PASA_UPDATE: g7284.t1, single gene model update, valid-1, status:[pasa:asmbl_2610,status:12], valid-1 NODE_1785_length_9264_cov_43.2405 . gene 153 1679 . + . ID=g7284;Name=g7284.t1 NODE_1785_length_9264_cov_43.2405 . mRNA 153 1679 . + . ID=g7284.t1;Parent=g7284;Name=g7284.t1 NODE_1785_length_9264_cov_43.2405 . five_prime_UTR 153 157 . + . ID=g7284.t1.utr5p1;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . exon 153 266 . + . ID=g7284.t1.exon1;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . CDS 158 266 . + 0 ID=cds.g7284.t1;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . exon 413 1211 . + . ID=g7284.t1.exon2;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . CDS 413 1211 . + 2 ID=cds.g7284.t1;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . exon 1339 1679 . + . ID=g7284.t1.exon3;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . CDS 1339 1648 . + 1 ID=cds.g7284.t1;Parent=g7284.t1 NODE_1785_length_9264_cov_43.2405 . three_prime_UTR 1649 1679 . + . ID=g7284.t1.utr3p1;Parent=g7284.t1 #PROT g7284.t1 g7284 MTVTFVIEVMAATNAHIRLVQPNEEEADEQKELISQVARDPINTEPYEITRRTELGLMAEIFFNKIGVRLFYIVLAVYLYGDLAIYAVAVPKSLASVTCPEPANHDGSTWHCFGSLNSDNIHYVYVTIFAAVLGPFAFTNVQKTKYLQLATTLLRYTAFLMMIIIGFMQCAKGDGVGVHGGLSRRDIGELPNLFGVAIYAFMCHHSLPSLVTPIRNKSQLRKLFAGDVGLVFSFYLLLCVSAMVYLPPSEIKDIYTLNFKDYSVSFVGYFLGLFPVFTISASFPIILITLRNNLKTLFYNKERPYPYWLEHVGFPLLALIPPICIAYGTTNVQLLVNVTGSYPGLGVQFIVPASLVYCARKRMKRDLGKYENTHMSPFQHVGWFYLLAVWSVACIGFVTYHLTQQ* # ORIGINAL: g7285.t1 original gene structure, not modified by PASA NODE_1785_length_9264_cov_43.2405 AUGUSTUS gene 2646 3086 . + . ID=g7285;Name=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS mRNA 2646 3086 . + . ID=g7285.t1;Parent=g7285;Name=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 2646 2734 . + . ID=g7285.t1.exon1;Parent=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 2646 2734 . + 0 ID=cds.g7285.t1;Parent=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 2855 2968 . + . ID=g7285.t1.exon2;Parent=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 2855 2968 . + 1 ID=cds.g7285.t1;Parent=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 3083 3086 . + . ID=g7285.t1.exon3;Parent=g7285.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 3083 3086 . + 1 ID=cds.g7285.t1;Parent=g7285.t1 #PROT g7285.t1 g7285 MCVCVAEDSPDSLSPSPPNRSPRQALYTRQPADFMHISELVCDFASAPQHVQVHLRVKELKNRADHLL* # ORIGINAL: g7287.t1 original gene structure, not modified by PASA NODE_1785_length_9264_cov_43.2405 AUGUSTUS gene 5123 6676 . - . ID=g7287;Name=g7287.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS mRNA 5123 6676 . - . ID=g7287.t1;Parent=g7287;Name=g7287.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 5123 6676 . - . ID=g7287.t1.exon1;Parent=g7287.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 5123 6676 . - 0 ID=cds.g7287.t1;Parent=g7287.t1 #PROT g7287.t1 g7287 MAALADAGTMGAGPSVAPPPYAEAALVFMWAVYGFELYLTWRQYRKYGERILPQRLHGIIDDDTFERSRAYGMDRTRYSLLSDLYGQIEGTAVLVLGGLPWLWRAAGDALAAVSGVDVKERTTLHALAFLVVAMTIETVLRLPWGAYYTFVVEARHGFNKQTPRSWLWDKLKAVVLTHAIMLPVVSLLVWIIEYGGPFFYVYAWLFLLGFSLLAVTVYADYIAPLFDRYDSLPDGVLQARIFALARSINFPLKKILIVDASRKSSHSNAYYYGFFSNKRIVLFDTLLADEHRPARADKPADDAASPHAPTLHSADKKPQPHCTDDEVMAILAHELGHWSLNHTVKNFVLAQAHLFISLFVFGQLMHSSELFAAFGFPDSRPTLVGLLVIFQFVFSPVDLAVSFLLTVLSRRFEFQADAFAAGLGQGPHLRTALVKLQASNLGNMNPDWLYSAYHYSHPPLVERLAAIDAVTATTPPKSKVAKKTAPPAPVPHTQEHGPATGSPVTRSQTRAKSKKTD* # ORIGINAL: g7288.t1 original gene structure, not modified by PASA NODE_1785_length_9264_cov_43.2405 AUGUSTUS gene 6895 7755 . + . ID=g7288;Name=g7288.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS mRNA 6895 7755 . + . ID=g7288.t1;Parent=g7288;Name=g7288.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 6895 7755 . + . ID=g7288.t1.exon1;Parent=g7288.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 6895 7755 . + 0 ID=cds.g7288.t1;Parent=g7288.t1 #PROT g7288.t1 g7288 MAQVNAMARFAAVFGTLPRPAVIGMIHVRALPGTPLNRSSVAEIAEHAATEARTYARAGIDSVALENMHDVPYLCGTVGPEVVAAMTVVAAEVKRELAHAGRRVPVGLQLLAAANRSAVAVAHACALDFVRVEGYVYAHVADEGVIQSCAGDLLRYRRSLGADSVLVLADIKKKHSSHSITADVSLADTAHAAEFFLADGVIVTGTATGTCAAVRDVGEAVAAAGGRMPVLVGSGLTHDNAHEYRDAQGFIVGSHFKRGGQWQNELEYDKVARFMEAAAAVYGGRS* # PASA_UPDATE: g7289.t1, single gene model update, valid-1, status:[pasa:asmbl_2612,status:12], valid-1 NODE_1785_length_9264_cov_43.2405 . gene 7937 8951 . + . ID=g7289;Name=g7289.t1 NODE_1785_length_9264_cov_43.2405 . mRNA 7937 8951 . + . ID=g7289.t1;Parent=g7289;Name=g7289.t1 NODE_1785_length_9264_cov_43.2405 . five_prime_UTR 7937 8092 . + . ID=g7289.t1.utr5p1;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . exon 7937 8255 . + . ID=g7289.t1.exon1;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . CDS 8093 8255 . + 0 ID=cds.g7289.t1;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . exon 8408 8476 . + . ID=g7289.t1.exon2;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . CDS 8408 8476 . + 2 ID=cds.g7289.t1;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . exon 8574 8728 . + . ID=g7289.t1.exon3;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . CDS 8574 8728 . + 2 ID=cds.g7289.t1;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . exon 8841 8951 . + . ID=g7289.t1.exon4;Parent=g7289.t1 NODE_1785_length_9264_cov_43.2405 . CDS 8841 8951 . + 0 ID=cds.g7289.t1;Parent=g7289.t1 #PROT g7289.t1 g7289 MSRAGSPDRRRSPSPSSRKGDKEDQEAFAHECKAVFLAVASTIKQKLTRDEFTLALQHSGRNPSKKFVQEFFPSVKDADKPAATFDDFTAAMKMLKPVTYESLMKAFQRIDLDDNGYLSYDELLKALTKNGEKMSADEVHSILKDADTNGDGKLDYKEVGSSESG* # ORIGINAL: g7286.t1 original gene structure, not modified by PASA NODE_1785_length_9264_cov_43.2405 AUGUSTUS gene 3133 4743 . + . ID=g7286;Name=g7286.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS mRNA 3133 4743 . + . ID=g7286.t1;Parent=g7286;Name=g7286.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS exon 3133 4743 . + . ID=g7286.t1.exon1;Parent=g7286.t1 NODE_1785_length_9264_cov_43.2405 AUGUSTUS CDS 3133 4743 . + 0 ID=cds.g7286.t1;Parent=g7286.t1 #PROT g7286.t1 g7286 MAFKVQSSNVKYTDEEIISSVRYDTTEVRSVNGQTVVEPKSQAYTFRTQRRLPKLGMMLVGWGGNNGTTVTGGVIANRLGLSWRTKDGVMQSNYLGSLTQASTVRLGSGPDGDVNIPFKHLIPMVEPNDIVIDGWDISKMNLGDAMERAQVFEYDLQRQLRPHLVSLVPRPSIYFPDFIAANQADRADNVLTGTKWEQMEQIRRDIRDFKAKSGLDKIVVLWTANTERFCEVRVGLNDTADNLIRAIQRGEDEVSPSTLFAVACILEKVTYLNGSPQNTFVPGVIDLACQRDVFIGGDDFKSGQTKMKSVLVDFLVGAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNHILYKKDEHPDHVVVIKYVPSVADSKRAMDEYTSEIFMHGRNTIVMHNTCEDSLLASPIILDLVILAEACERISYKTEGMEEFERFHAVLSLLSYLLKAPLVPEKTPVVNALFRQRAAIENVFRACVGLSPENHMMLDTRRADRRQVTPLVEKVAAAEGSPLPVERLGQHGSA* # PASA_UPDATE: g2205.t1, single gene model update, valid-1, status:[pasa:asmbl_5684,status:12], valid-1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . gene 380 1777 . + . ID=g2205;Name=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . mRNA 380 1777 . + . ID=g2205.t1;Parent=g2205;Name=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . five_prime_UTR 380 381 . + . ID=g2205.t1.utr5p1;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 380 587 . + . ID=g2205.t1.exon1;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 382 587 . + 0 ID=cds.g2205.t1;Parent=g2205.t1;5_prime_partial=true NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 1214 1381 . + . ID=g2205.t1.exon2;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 1214 1381 . + 1 ID=cds.g2205.t1;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 1535 1777 . + . ID=g2205.t1.exon3;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 1535 1775 . + 1 ID=cds.g2205.t1;Parent=g2205.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . three_prime_UTR 1776 1777 . + . ID=g2205.t1.utr3p1;Parent=g2205.t1 #PROT g2205.t1 g2205 RNCIIVISGANDLLTPADVRESSDVITAARVVVCQMEVPQETSLEALKIARESGAVTILNPAPAPKPSEFLYDLLNYCDIICPNESEAELLSGGIAVDTDEGCVAAARKLIEMGAKKVVMTLGERGALYVDATREFRVSCRSVRAVDTSGAGDSFVGAMSYFLAKGVDIEEALNRAAECATISVTRPGTQASYPVRTELPSSWF* # PASA_UPDATE: g2206.t1, single gene model update, valid-1, status:[pasa:asmbl_5685,status:3], valid-1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . gene 2475 3878 . + . ID=g2206;Name=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . mRNA 2475 3878 . + . ID=g2206.t1;Parent=g2206;Name=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . five_prime_UTR 2475 2538 . + . ID=g2206.t1.utr5p1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 2475 2625 . + . ID=g2206.t1.exon1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 2539 2625 . + 0 ID=cds.g2206.t1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 2758 2955 . + . ID=g2206.t1.exon2;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 2758 2955 . + 0 ID=cds.g2206.t1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 3163 3288 . + . ID=g2206.t1.exon3;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 3163 3288 . + 0 ID=cds.g2206.t1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . exon 3513 3878 . + . ID=g2206.t1.exon4;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . CDS 3513 3605 . + 0 ID=cds.g2206.t1;Parent=g2206.t1 NODE_3187_length_4065_cov_40.9241_potentialcontaminant . three_prime_UTR 3606 3878 . + . ID=g2206.t1.utr3p1;Parent=g2206.t1 #PROT g2206.t1 g2206 MASTRASLACALVALFFVSHAASALGSAKIIFTAIALSDEAKVALLSAYPPLLENVYADHMTLVFMPKDDVVSGTPFGNSVNMTVFGYAHDEKCQAVAVDDHGGAESQNPITHVTISCSAGNNPVYSNDLLKKGFNQVNDGVVLTGRVGGCTKMNGAACAEWLYAKP* # PASA_UPDATE: g3659.t1, single gene model update, valid-1, status:[pasa:asmbl_9931,status:3], valid-1 NODE_903_length_16033_cov_44.1533 . gene 10352 13536 . - . ID=g3659;Name=g3659.t1 NODE_903_length_16033_cov_44.1533 . mRNA 10352 13536 . - . ID=g3659.t1;Parent=g3659;Name=g3659.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 13438 13536 . - . ID=g3659.t1.utr5p1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 13351 13536 . - . ID=g3659.t1.exon1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 13351 13437 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 12319 13220 . - . ID=g3659.t1.exon2;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 12319 13220 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 12104 12191 . - . ID=g3659.t1.exon3;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 12104 12191 . - 1 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 11837 11944 . - . ID=g3659.t1.exon4;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 11837 11944 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 11619 11744 . - . ID=g3659.t1.exon5;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 11619 11744 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 11400 11494 . - . ID=g3659.t1.exon6;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 11400 11494 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 10698 11316 . - . ID=g3659.t1.exon7;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 10698 11316 . - 1 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . exon 10352 10617 . - . ID=g3659.t1.exon8;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . CDS 10489 10617 . - 0 ID=cds.g3659.t1;Parent=g3659.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 10352 10488 . - . ID=g3659.t1.utr3p1;Parent=g3659.t1 #PROT g3659.t1 g3659 MSARQQPPWTKPASSAKTLRILNSLTRDKDEFVPQSGNVVRCYTCGPTVYDASHMGHARSYITFDIIRRLLTEYFNYEVMWVMNITDIDDKIILRARRNHLFSVYSEKKHTLEEVLADVREALPSYEAKMNALQAADPKDPKVGVLASAIAAAKGATEASGATVESVLAGARDPLADYLDKKHGQDVTDNEIFVQTARHWEGEFHKDMAALNVLPADVLTRVSEYVPEIVAYVDKIVQRGFGYEAQGSVYFDTAKFDGSEGHAYGKLMPESIGNLTSLAEGEGELSSGGGKRSKTDFALWKASKPGEPAWDSPWGRGRPGWHIECSAMASEIIGSVLDIHCGGIDLRFPHHENELAQAEAHYDCNQWTNYFLHAGHLEIDGQKMSKSFKNFQTIQDALKLYTARQLRLMFLMHKWNDTLGYSAETMRDAVNLEKAFTEFFLNVKASVAGLGNDNGGIKWTSLELDFDRKFREAQDAVHGALCDNFDTHTAFLSLKELVGATNTYLRDTKQAANGRLLGSIGRYVTRIFSAFGLIERTDTLGFGSQQANADVESIMAPFLQSFGAFRDTVRQNAREQKNVALLRLCDDVRDRILPDLGVRLEDREGQPAAVKFVGAEEIARQRKEEAAQKEAKEEAARKKAEEDRRKQEEKNALSAIPPEKLFTRETDKYSKFDDKGIPTHDVEGKEVSKSQRKKCEKAHEAQIKLHAAYRDSHPVPE* # PASA_UPDATE: g3652.t1, single gene model update, valid-1, status:[pasa:asmbl_9926,status:3], valid-1 NODE_903_length_16033_cov_44.1533 . gene 495 1629 . + . ID=g3652;Name=g3652.t1 NODE_903_length_16033_cov_44.1533 . mRNA 495 1629 . + . ID=g3652.t1;Parent=g3652;Name=g3652.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 495 561 . + . ID=g3652.t1.utr5p1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 495 595 . + . ID=g3652.t1.exon1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 562 595 . + 0 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 677 756 . + . ID=g3652.t1.exon2;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 677 756 . + 2 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 841 960 . + . ID=g3652.t1.exon3;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 841 960 . + 0 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 1070 1187 . + . ID=g3652.t1.exon4;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 1070 1187 . + 0 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 1270 1379 . + . ID=g3652.t1.exon5;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 1270 1379 . + 2 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . exon 1489 1629 . + . ID=g3652.t1.exon6;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . CDS 1489 1587 . + 0 ID=cds.g3652.t1;Parent=g3652.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 1588 1629 . + . ID=g3652.t1.utr3p1;Parent=g3652.t1 #PROT g3652.t1 g3652 MVVLRCKVVLVGDATVGKTSLTQVFQGDSSQFPKTYSMTAGVDLIVKTVGIPETKDSVELFIFDTAGHEVYSDVVSRYWAEAAEVMIVYDMTNKTSFDNASKWYDRVRKTRPDGGINGILVGNKKDLDEVRVVKEKTAKEFAKSKDLRYFETSALSQTEVDAPFIELAEMFYRNYEEKIERFKGLV* # PASA_UPDATE: g3655.t1, single gene model update, valid-1, status:[pasa:asmbl_9930,status:12], valid-1 NODE_903_length_16033_cov_44.1533 . gene 4594 5329 . - . ID=g3655;Name=g3655.t1 NODE_903_length_16033_cov_44.1533 . mRNA 4594 5329 . - . ID=g3655.t1;Parent=g3655;Name=g3655.t1 NODE_903_length_16033_cov_44.1533 . exon 5020 5329 . - . ID=g3655.t1.exon1;Parent=g3655.t1 NODE_903_length_16033_cov_44.1533 . CDS 5020 5329 . - 0 ID=cds.g3655.t1;Parent=g3655.t1 NODE_903_length_16033_cov_44.1533 . exon 4594 4885 . - . ID=g3655.t1.exon2;Parent=g3655.t1 NODE_903_length_16033_cov_44.1533 . CDS 4773 4885 . - 2 ID=cds.g3655.t1;Parent=g3655.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 4594 4772 . - . ID=g3655.t1.utr3p1;Parent=g3655.t1 #PROT g3655.t1 g3655 MSIGIPIKLIHEAEGHIITIELKSGEIYRGRLVEAEDNMNSQLQEVKMTARDGHVSELEHVYIRGSKIRFLILPDMLKNAPMFQRKAEKKGGTGGKTAILRAQAAARGRARGRGGPGGRGGGRGAPGGDRGGSNAFQRRQ* # ORIGINAL: g3657.t1 original gene structure, not modified by PASA NODE_903_length_16033_cov_44.1533 AUGUSTUS gene 7544 8040 . + . ID=g3657;Name=g3657.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS mRNA 7544 8040 . + . ID=g3657.t1;Parent=g3657;Name=g3657.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 7544 7641 . + . ID=g3657.t1.exon1;Parent=g3657.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 7544 7641 . + 0 ID=cds.g3657.t1;Parent=g3657.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 7926 8040 . + . ID=g3657.t1.exon2;Parent=g3657.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 7926 8040 . + 1 ID=cds.g3657.t1;Parent=g3657.t1 #PROT g3657.t1 g3657 MADARVERMKKSVDTLKAELEFPRVKVSEASGSLKEFCAKTKDPLLPSVWGKLEDKDNPYAKERGKCDVL* # PASA_UPDATE: g3653.t1, single gene model update, valid-1, status:[pasa:asmbl_9929,status:12], valid-1 NODE_903_length_16033_cov_44.1533 . gene 1633 3416 . - . ID=g3653;Name=g3653.t1 NODE_903_length_16033_cov_44.1533 . mRNA 1633 3416 . - . ID=g3653.t1;Parent=g3653;Name=g3653.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 3362 3416 . - . ID=g3653.t1.utr5p1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . exon 3359 3416 . - . ID=g3653.t1.exon1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . CDS 3359 3361 . - 0 ID=cds.g3653.t1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . exon 2250 3146 . - . ID=g3653.t1.exon2;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . CDS 2250 3146 . - 0 ID=cds.g3653.t1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . exon 1864 2130 . - . ID=g3653.t1.exon3;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . CDS 1864 2130 . - 0 ID=cds.g3653.t1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . exon 1633 1751 . - . ID=g3653.t1.exon4;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . CDS 1716 1751 . - 0 ID=cds.g3653.t1;Parent=g3653.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 1633 1715 . - . ID=g3653.t1.utr3p1;Parent=g3653.t1 #PROT g3653.t1 g3653 MSHRKFEAPRHGNLGFLPRKRAARHKGKVKSFPRDDATKPCHLTAFMGFKAGMTHIVRELDRTGSKSHKKEIVEAVTIIETPPMVVVGVVGYVQTPRGLRALTTVWAEHLSEECRRRFYKTWYKSKKKAFTKYAKRWTSEEGKKSIDRELARIKKYCSVVRVITHTQVRKVKLGQKKAHIMEIQVNGGSVADKVDFAVQHFEKQVDIKAVFAQNEMIDVIGVTRGHGFTGVTKRWGTRKLPRKTHKGLRKVACIGAWHPANVQYTVPRAGQHGYFHRTERNKKIYRIGDAIRTEGGKVIKNNAATEYDLTDKSITPLGGFPHYGEVNNDFIIVKGCVIGPKKRVLTLRKSLLVHTKRSALEKIDLKFIDTSSKFGHGRFQTVEEKKAFMGARKRDLEKEQ* # PASA_UPDATE: g3654.t1, single gene model update, valid-1, status:[pasa:asmbl_9925,status:12],[pasa:asmbl_9927,status:12], valid-1 NODE_903_length_16033_cov_44.1533 . gene 3708 4559 . + . ID=g3654;Name=g3654.t1 NODE_903_length_16033_cov_44.1533 . mRNA 3708 4559 . + . ID=g3654.t1;Parent=g3654;Name=g3654.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 3708 3775 . + . ID=g3654.t1.utr5p1;Parent=g3654.t1 NODE_903_length_16033_cov_44.1533 . exon 3708 4034 . + . ID=g3654.t1.exon1;Parent=g3654.t1 NODE_903_length_16033_cov_44.1533 . CDS 3776 4034 . + 0 ID=cds.g3654.t1;Parent=g3654.t1 NODE_903_length_16033_cov_44.1533 . exon 4210 4559 . + . ID=g3654.t1.exon2;Parent=g3654.t1 NODE_903_length_16033_cov_44.1533 . CDS 4210 4271 . + 2 ID=cds.g3654.t1;Parent=g3654.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 4272 4559 . + . ID=g3654.t1.utr3p1;Parent=g3654.t1 #PROT g3654.t1 g3654 MTDDDKIKIPFASFRFETGREYVENRETVDQERLISYEMARILRDRVRECYRREGVNHMKRCSQHYAAYVRHVRPDLVPGAPINDLNDIVKPQYPADKFPRDKYDI* # ORIGINAL: g3651.t1 original gene structure, not modified by PASA NODE_903_length_16033_cov_44.1533 AUGUSTUS gene 38 134 . - . ID=g3651;Name=g3651.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS mRNA 38 134 . - . ID=g3651.t1;Parent=g3651;Name=g3651.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 38 134 . - . ID=g3651.t1.exon1;Parent=g3651.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 38 134 . - 0 ID=cds.g3651.t1;Parent=g3651.t1 #PROT g3651.t1 g3651 MDLAALNAALPPIERKEGDANITVREGWLAKQ # PASA_UPDATE: g3656.t1, single gene model update, valid-1, status:[pasa:asmbl_9928,status:12], valid-1 NODE_903_length_16033_cov_44.1533 . gene 5775 7049 . + . ID=g3656;Name=g3656.t1 NODE_903_length_16033_cov_44.1533 . mRNA 5775 7049 . + . ID=g3656.t1;Parent=g3656;Name=g3656.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 5775 5818 . + . ID=g3656.t1.utr5p1;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . exon 5775 5821 . + . ID=g3656.t1.exon1;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . CDS 5819 5821 . + 0 ID=cds.g3656.t1;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . exon 6090 6267 . + . ID=g3656.t1.exon2;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . CDS 6090 6267 . + 0 ID=cds.g3656.t1;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . exon 6548 7049 . + . ID=g3656.t1.exon3;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . CDS 6548 6720 . + 2 ID=cds.g3656.t1;Parent=g3656.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 6721 7049 . + . ID=g3656.t1.utr3p1;Parent=g3656.t1 #PROT g3656.t1 g3656 MTQKRRNCGRSKHGRGHVKPVRCSNCARCVPKDKAIKRFLIRNMVEQAAIRDISEASVYENYALPKLYIKMQYCISCAIHSKVVRNRSRDERKNRDPPPRFKRAGRPEDRKQAAPKK* # PASA_UPDATE: g3660.t1, single gene model update, valid-1, status:[pasa:asmbl_9932,status:3], valid-1 NODE_903_length_16033_cov_44.1533 . gene 13942 15197 . - . ID=g3660;Name=g3660.t1 NODE_903_length_16033_cov_44.1533 . mRNA 13942 15197 . - . ID=g3660.t1;Parent=g3660;Name=g3660.t1 NODE_903_length_16033_cov_44.1533 . five_prime_UTR 15149 15197 . - . ID=g3660.t1.utr5p1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . exon 15084 15197 . - . ID=g3660.t1.exon1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . CDS 15084 15148 . - 0 ID=cds.g3660.t1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . exon 14748 14892 . - . ID=g3660.t1.exon2;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . CDS 14748 14892 . - 1 ID=cds.g3660.t1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . exon 14575 14649 . - . ID=g3660.t1.exon3;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . CDS 14575 14649 . - 0 ID=cds.g3660.t1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . exon 14313 14450 . - . ID=g3660.t1.exon4;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . CDS 14313 14450 . - 0 ID=cds.g3660.t1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . exon 13942 14216 . - . ID=g3660.t1.exon5;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . CDS 14100 14216 . - 0 ID=cds.g3660.t1;Parent=g3660.t1 NODE_903_length_16033_cov_44.1533 . three_prime_UTR 13942 14099 . - . ID=g3660.t1.utr3p1;Parent=g3660.t1 #PROT g3660.t1 g3660 MFRVVRGLRPLCSVGAVPRAACRSLPRMYSAEALKAPEGPKGANPKIMAIVDQISKLTLLEAAELTSTLKTTLNIKDAPVMAGFSPASAAPVAAAGPAKPEAPKEAAKTEFTVKLEKVNDDAKVKVIREVKNIVPNINLVQAKKLVESLPHVLRENVSKDEAEKIKKAITEAGGTVSIA* # ORIGINAL: g3658.t1 original gene structure, not modified by PASA NODE_903_length_16033_cov_44.1533 AUGUSTUS gene 8324 10123 . - . ID=g3658;Name=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS mRNA 8324 10123 . - . ID=g3658.t1;Parent=g3658;Name=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 9967 10123 . - . ID=g3658.t1.exon1;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 9967 10123 . - 0 ID=cds.g3658.t1;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 9659 9850 . - . ID=g3658.t1.exon2;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 9659 9850 . - 2 ID=cds.g3658.t1;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 8721 9548 . - . ID=g3658.t1.exon3;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 8721 9548 . - 2 ID=cds.g3658.t1;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS exon 8324 8619 . - . ID=g3658.t1.exon4;Parent=g3658.t1 NODE_903_length_16033_cov_44.1533 AUGUSTUS CDS 8324 8619 . - 2 ID=cds.g3658.t1;Parent=g3658.t1 #PROT g3658.t1 g3658 MKAAALIVLVAACVAGFAAAAADFELEDNVIVLTDDNFDDVVQEKGFLLAEFYAPWCGHCKNLVPEYAKAATDLKGSDIFLGKLDATVHTKTAGRFNIRGYPTIKFFKNGVESEYNGGRTASEIVSWLKKRTGPSARTLDTVEAAKEFSESAEVAVIGFFSDVNSAEARAFIKVADSVDDIPFGITSDAAIASEFKVDSPAIVLFKKFDEGRNEFTGGFNSEEISKFVQANQLPLIIEFLDSTAQKIFGGEIKKHVLVFLKKSSPSAESLLNIYRNVAARFRGQLLFVFVDADKSSSHRVLDYFGIKQDELPDVRLINMGVDAMEKYRPAAGEITEQSLSQFIEDYIEGRLDKYLMSAELPEDWNRGPVTTLVGKNHDEVVYDDTKNVFVEYYAPWCGHCKKLVPIWEELGTKFADRPDIVIAKMDSTVNEAANLSVQGFPTLKFYPAGSRTSLSYDGGRTLEDLTSFVEKNAVEVDGQAHGHDHSHEEL* # ORIGINAL: g4426.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 39835 41925 . + . ID=g4426;Name=g4426.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 39835 41925 . + . ID=g4426.t1;Parent=g4426;Name=g4426.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 39835 40264 . + . ID=g4426.t1.exon1;Parent=g4426.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 39835 40264 . + 0 ID=cds.g4426.t1;Parent=g4426.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 40739 41925 . + . ID=g4426.t1.exon2;Parent=g4426.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 40739 41925 . + 2 ID=cds.g4426.t1;Parent=g4426.t1 #PROT g4426.t1 g4426 MSSASPAVLTAEDSEAGVVTGALPTSESNAIHGSLFSAPVSVNVRARHSADGGRYAPTGGMTPSNTNRRLLVLATVICPLLLFASAGLMLKLTPDLTHVHEMVGTVDGDLMLQGVVPMAGDESRRALGAVANSTVVAPPIKPKLWAVYPMWVDARKAVDGFVKNSDTGFLRVLLENTTHWRQTAHIGLADLVVVHPNYPRVTGGTFNQQVFRVMKPSASCNRFPATPRIRSFTDDRRLHLDPARKAFVGCDIGRKSSMTMCLRNAGELLSRSAANTSPFVSLLRRRFPRNVTVESIHPPAFILNLLNTAEMTSELRRMTAFQESERSLGKLCRFIVKPNNGEGGRGIFVAESAEHVIGKLLSHRGTSGSVFLAQHLIDNPLRLSSGHNRFDVRVYFLLTSQDPLVVYFNRRATVIRLASAGRRASAANDSSTTSAKVFLTNYSFHHDKSKLWRLSAFEDVMRHANRTNAWEGALALMRRIAPFAIGLHGRTVHRRGSFHLFGCDFVLDDHFGPWFIECNKVPMIISIPVCQTAVLVVT* # PASA_UPDATE: g4420.t1, single gene model update, valid-1, status:[pasa:asmbl_8573,status:3], valid-1 NODE_62_length_47304_cov_39.4905 . gene 6565 9736 . + . ID=g4420;Name=g4420.t1 NODE_62_length_47304_cov_39.4905 . mRNA 6565 9736 . + . ID=g4420.t1;Parent=g4420;Name=g4420.t1 NODE_62_length_47304_cov_39.4905 . five_prime_UTR 6565 6617 . + . ID=g4420.t1.utr5p1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 6565 6663 . + . ID=g4420.t1.exon1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 6618 6663 . + 0 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 6786 6878 . + . ID=g4420.t1.exon2;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 6786 6878 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 7021 7203 . + . ID=g4420.t1.exon3;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 7021 7203 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 7375 7612 . + . ID=g4420.t1.exon4;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 7375 7612 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 7787 7883 . + . ID=g4420.t1.exon5;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 7787 7883 . + 1 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 8183 8292 . + . ID=g4420.t1.exon6;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 8183 8292 . + 0 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 8504 8573 . + . ID=g4420.t1.exon7;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 8504 8573 . + 1 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 8849 8855 . + . ID=g4420.t1.exon8;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 8849 8855 . + 0 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 9042 9071 . + . ID=g4420.t1.exon9;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 9042 9071 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 9251 9394 . + . ID=g4420.t1.exon10;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 9251 9394 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . exon 9613 9736 . + . ID=g4420.t1.exon11;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . CDS 9613 9653 . + 2 ID=cds.g4420.t1;Parent=g4420.t1 NODE_62_length_47304_cov_39.4905 . three_prime_UTR 9654 9736 . + . ID=g4420.t1.utr3p1;Parent=g4420.t1 #PROT g4420.t1 g4420 MKNEIVVRLDKGQYIGGEVIHGVVYVNCLTPVPAKSLKLKLKGMEKTIWEETELQQRGDGTSEHVTITRGGSRDFFKMEFHLVSFPGIYAPGTYAYPFQWALPPGLPGSFHESHGSLGSGLHLGCQIRYQIKAILDIPGTKHDLKHKVHLAVIDKLDTTIQPQHHKKIGTVRFLCCIPKGDLECEAWMDKNAYCANETAQIHMAVKNNSTVNVDNFAVKLMRTLIVRDKSGHTKHLVTTVCKEKYPGTPALTSRESDVPLPLVANGKPIQQSVRSDLIECKYHVDIECQIPWSPDIEIHAPVEIYEPISPGWSGFQMPPWVGQCVVQRVDACALDAALAATLLTGAIFGLRF* # ORIGINAL: g4421.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 10274 18045 . + . ID=g4421;Name=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 10274 18045 . + . ID=g4421.t1;Parent=g4421;Name=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 10274 10375 . + . ID=g4421.t1.exon1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 10274 10375 . + 0 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 10703 10853 . + . ID=g4421.t1.exon2;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 10703 10853 . + 0 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 11058 11209 . + . ID=g4421.t1.exon3;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 11058 11209 . + 2 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 11623 11779 . + . ID=g4421.t1.exon4;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 11623 11779 . + 0 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 12472 14390 . + . ID=g4421.t1.exon5;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 12472 14390 . + 2 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 14623 15484 . + . ID=g4421.t1.exon6;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 14623 15484 . + 0 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 15694 15852 . + . ID=g4421.t1.exon7;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 15694 15852 . + 2 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 16065 16113 . + . ID=g4421.t1.exon8;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 16065 16113 . + 2 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 16440 16628 . + . ID=g4421.t1.exon9;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 16440 16628 . + 1 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 16928 16978 . + . ID=g4421.t1.exon10;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 16928 16978 . + 1 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 17345 17393 . + . ID=g4421.t1.exon11;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 17345 17393 . + 1 ID=cds.g4421.t1;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 17632 18045 . + . ID=g4421.t1.exon12;Parent=g4421.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 17632 18045 . + 0 ID=cds.g4421.t1;Parent=g4421.t1 #PROT g4421.t1 g4421 MRSRLALAGQSVAVHAPVARAIFFALAISCAVQLVVANGRISFSVFAVNNPNGELATGEKCDFGVLGTDRCDTYVDACINVTKSVVTYTDAAGYSVTDVVTKCGVPGQSSRLVDVNTVAYQPPFGLSFVFKGSFKTSAFLTSIQVIDDDTLVVTPQAIANITIWSYELKIGNFNMTTKIGTTGQVLWACPVCLNGGTCNGGIRGSGSCACTPGWTGPLCDVTCPAGKYGPNCNITCLCQNGAECDRFTGACACTPGWTGALCNVTCKAQFYGANCSKPCACKNTTSACDRFTGACMCLSGYTGPKCDVPCGTNKYGPNCARTCNCVFGTCDPVVGCLCQAGYGGPTCASTCTDGTYGVGCLRKCSCADKFKCDPTMGCNCYDPGYKTGTNCDVDCPQYEYGPSCPRYFLTSINVDACMAGYYSVDPASPTCDRGCSSTTYGSKCAYACQCQGNSVCDRYTGACTCYLGSNGTLCDKPCPYNTFGLNCALTCNCQNGGYCDRYYGCVCPPGWQGTACRTACAEGFYGMNCTSVCNCRNGANCDRFTGTCACTPGWTNATCSAPCPAGAYGPNCTLSCTCQNGAMCDRFTGACNCTAGWTGNSCDVPCPSGTFGANCSLACTCQNGATCDRFTGCVCAPGYKGTVCDSKCPSGSYGVGCNGTCLCKNGAVCHHATGACDCVVPGWTGPTCNTACAGTGTFGYNCSRPCLCVNGGVCDGVNGSCNCTNPGWQGPVCDVSCSTTQTFGVACTQPCVCKNDGRCDPVSGLCTCPPAWTGMTCETASRPPPPTNATITHASSTEIQLRIDGEGLVDWDYEVKRIGCPIVPSIRIKANTTFFDTRQIIANQEYVYVVTAVNPFDSTGKAVSESLQLPSVLTTKREPPLKPSVLAVATMELDRPVLVLTWVDDPTSAETNTTYITRNDGVVVVLFGNHSYIDRTVLPQTVYTYTLVNENQYGRSDGANTTAKTLPLKSDSPPSDGASSAESGAHSDAGPIAGSIVGAVVVSVGVVAVYVVMRRRRRIMKHELMARSELELIDTVVRRPEIAEIEIPGSCIRLKEKLGEGEYGEVYRADVDLGAHGGMQTAAVKTFKLTSLSSADEIRSARSAFMSEIDLMRTVPKHPHVIALLGVCTQSEPNCAVLEYAEFADLRHYLLKHGSALSAGDLLCFCIDISRGMEHLEKVQIVHRDLAARNCMVVAGPRPPNTQELGWTLGPKANVVIKIADFGLSKDTSVSGDYYQAKTFRKLPVKWMAPESLEKRMFTHASDVWSFGVTAWEVFSRGAKPFPGLQNHEVADHLSRGIRMSSPPGCPPSVFTVIDSCWRKYAETRPHFSQVTVQLRKAMMVLCKGAAAGDDDTIGGALTRENSRADLLAATRNSGVAVAVAASGSGAPTPSESMYFTTLPDAEYTDTGALIRDDSHC* # ORIGINAL: g4425.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 34076 36279 . + . ID=g4425;Name=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 34076 36279 . + . ID=g4425.t1;Parent=g4425;Name=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 34076 34237 . + . ID=g4425.t1.exon1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 34076 34237 . + 0 ID=cds.g4425.t1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 34434 34566 . + . ID=g4425.t1.exon2;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 34434 34566 . + 0 ID=cds.g4425.t1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 34947 35051 . + . ID=g4425.t1.exon3;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 34947 35051 . + 2 ID=cds.g4425.t1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 35424 35614 . + . ID=g4425.t1.exon4;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 35424 35614 . + 2 ID=cds.g4425.t1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 35841 35990 . + . ID=g4425.t1.exon5;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 35841 35990 . + 0 ID=cds.g4425.t1;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 36127 36279 . + . ID=g4425.t1.exon6;Parent=g4425.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 36127 36279 . + 0 ID=cds.g4425.t1;Parent=g4425.t1 #PROT g4425.t1 g4425 MDAGVGSMVLSAGIMAGRPSSRQKASLWRTLLSCVPLVVLGLARLAAVKGVDYQEHVSEYGVHCNFFLVMAAVSAMYALFVRFLPKNSEGIVGVVLLVGHQLALMSPGLSWYIAEVARDGIVSANKEGIFSLPGNFALFLIGAWVGRHVWSSPAALTPNRPSSQSLWFLIRILAVDAAIWIVYNASRLYIEESSRKMVNATYVLWMLGYNGLFLAGMYAVHALVGSAADECALVRSINRNQLAIFLFANLLTGAVNLSLHTITTPDSAALLLLSVYMLVTCAAATTMDALNITAKFW* # ORIGINAL: g4419.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 3714 4976 . - . ID=g4419;Name=g4419.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 3714 4976 . - . ID=g4419.t1;Parent=g4419;Name=g4419.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 3714 4976 . - . ID=g4419.t1.exon1;Parent=g4419.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 3714 4976 . - 0 ID=cds.g4419.t1;Parent=g4419.t1 #PROT g4419.t1 g4419 MYAKKGRTVVYAGAAPGTHIRYLADLFPEVDFVLVDPAPFSITNTRQIEIRRELFTDDIAREYAGRSTLFISDVRSADWKEMVAEESDRQVCEDMVDQRRWHELMQPRKSMLKFRLSYLPGMTEYLAGKIYLPIWGPITTTEARLVPTEGVVVYDNAHYEQQMFYFNTVGRVALYAHSVSGMGIDHCYDCRAEIEVLREYLVSRGRLRQSDSDDDVFAAIAHMSSEVSLACAANRTLACPNSDPDVRRKGMRERQWIGGVPAYVHAKQGGGSSRDGRNGGSMSAADAADAARHNRRRSHNSEGSLRSGGDDSADGRDRRRHRDRAHRDRSDKSKDRKHGDDSAGGRLDGRGGRGTHTGVRRYSEGDPGDPADAAPGGVRGSHPGERRHVKPAVGADGRPQQSPDAVVGSHMRSADDLRLD* # ORIGINAL: g4418.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 185 3391 . + . ID=g4418;Name=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 185 3391 . + . ID=g4418.t1;Parent=g4418;Name=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 185 1403 . + . ID=g4418.t1.exon1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 185 1403 . + 0 ID=cds.g4418.t1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 1610 1662 . + . ID=g4418.t1.exon2;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 1610 1662 . + 2 ID=cds.g4418.t1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 1860 1878 . + . ID=g4418.t1.exon3;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 1860 1878 . + 0 ID=cds.g4418.t1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 2215 2278 . + . ID=g4418.t1.exon4;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 2215 2278 . + 2 ID=cds.g4418.t1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 2568 2975 . + . ID=g4418.t1.exon5;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 2568 2975 . + 1 ID=cds.g4418.t1;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 3244 3391 . + . ID=g4418.t1.exon6;Parent=g4418.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 3244 3391 . + 1 ID=cds.g4418.t1;Parent=g4418.t1 #PROT g4418.t1 g4418 ANDYDLYDDSFSRTVPATTEQAKTSVSAQGAQQQQHQQQQQQQQQQLQQQQQQHHQQQQQHHQQQQLQHHQQQQQHIQQQQQHQQQIQLIQQLQQQGSTPAQQLQAQQLLAQLPPGIMFPFPAQNPNHNNAPLQQSSAPGGGANMANMGSNIGNSGNSGNSGGPRGGIMMYLGNLQWWTSDEDILGGLQAIGVSDVRDVKIYEEKGKNGRSRGYASLVVASEESANAIADRLPTSGVGSDGDVKPVVLFANDPNARSAIGQLQNKPLASAVQIMMLQGLPAAPRGRNARGTNPATGHMSSRDTAPMPAGPGRSSGGAQGVHMQGQEMQGQQQGHVQGMPPMPPMPGMQNGMQNGMPPMPPMPGMQNVMPNGMPPMPPGMPGMGGPMGGNVNGPPMRPPMGVRPGMPGLPGMFDFPFGMGPPRPMGGFPDPAMFGGGPVMFPGGDMMGMQNLGGFDPMAMFGRMNPGFGGFGGPGGMRDRDRNGDDGDRRGRSRSRSRSPSRDRSRSRSRDRGSGGVTGGGGSVAAEDGVFPSSRGGGGSGRRDRAAPDDEGGERGGKRRSGSDSHGRHPPDARHRKDDRGSSGRDERRRRDGNEDDDERRKRERGDRERDKGSSGGESRHGRSGGSGSASGRSSHR* # PASA_UPDATE: g4427.t1, single gene model update, valid-1, status:[pasa:asmbl_8577,status:12], valid-1 NODE_62_length_47304_cov_39.4905 . gene 44006 46025 . - . ID=g4427;Name=g4427.t1 NODE_62_length_47304_cov_39.4905 . mRNA 44006 46025 . - . ID=g4427.t1;Parent=g4427;Name=g4427.t1 NODE_62_length_47304_cov_39.4905 . five_prime_UTR 45967 46025 . - . ID=g4427.t1.utr5p1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . exon 45938 46025 . - . ID=g4427.t1.exon1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . CDS 45938 45966 . - 0 ID=cds.g4427.t1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . exon 45308 45720 . - . ID=g4427.t1.exon2;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . CDS 45308 45720 . - 1 ID=cds.g4427.t1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . exon 44872 45046 . - . ID=g4427.t1.exon3;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . CDS 44872 45046 . - 2 ID=cds.g4427.t1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . exon 44592 44688 . - . ID=g4427.t1.exon4;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . CDS 44592 44688 . - 1 ID=cds.g4427.t1;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . exon 44006 44281 . - . ID=g4427.t1.exon5;Parent=g4427.t1 NODE_62_length_47304_cov_39.4905 . CDS 44006 44281 . - 0 ID=cds.g4427.t1;Parent=g4427.t1 #PROT g4427.t1 g4427 MRKRAASTSSDDDADAIERKRQLSEAAIGGAAVVAESKKSNVKAPAAAEDHKNGPLSASAQSKAKTGEDARSVMSRPSLRALVFCDGDVGNDDDAWSRERKRENDEFQRHATLKLHAFLDGTVGASLASDVWKQIDHSEGGERGDNEVGVRGVRLFRHSPVVTSFVDGMQVEADAVRSHNAAAKALRRSSCGAQGGPDGKRKGDRRSSDDSDDEEDQRRRQMLMESSVTGSAIVQAAKSVRSAGSAVASSPVPVPISTGTPQSDGAKHKRPRTQSEDDDRGEETDEKTIKKEKKDKKEKKDRKDKNEKKHKKDKKDKKESDETQHRRQL* # ORIGINAL: g4424.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 31642 32316 . - . ID=g4424;Name=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 31642 32316 . - . ID=g4424.t1;Parent=g4424;Name=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 32228 32316 . - . ID=g4424.t1.exon1;Parent=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 32228 32316 . - 0 ID=cds.g4424.t1;Parent=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 31921 32060 . - . ID=g4424.t1.exon2;Parent=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 31921 32060 . - 1 ID=cds.g4424.t1;Parent=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 31642 31706 . - . ID=g4424.t1.exon3;Parent=g4424.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 31642 31706 . - 2 ID=cds.g4424.t1;Parent=g4424.t1 #PROT g4424.t1 g4424 MADVKSVRRHFLRIKPKNRNATKLQFISSSCEAFAQITNEFLNIVLVRALEIERVRWESENGALGGDDYFALSIESVNEALGTLGMNALIPPEAESP* # ORIGINAL: g4428.t1 original gene structure, not modified by PASA NODE_62_length_47304_cov_39.4905 AUGUSTUS gene 46533 47033 . + . ID=g4428;Name=g4428.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS mRNA 46533 47033 . + . ID=g4428.t1;Parent=g4428;Name=g4428.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS exon 46533 47033 . + . ID=g4428.t1.exon1;Parent=g4428.t1 NODE_62_length_47304_cov_39.4905 AUGUSTUS CDS 46533 47033 . + 0 ID=cds.g4428.t1;Parent=g4428.t1 #PROT g4428.t1 g4428 MDAHTNNEFELGEIRPRIPSDIQQARRPSATANRLPHAASSRPAVEGISSLDACTDIRDCGRRALTEWNALPRRHSRRRRWMVLLALTCVPAALLFAYAGVGWDDRSSDNYDTGLVLAEALLLITIALINAFVEIRLVMVEIAFGMQRNDFVCGWLLWMCASGICD* # PASA_UPDATE: g4422.t1, single gene model update, valid-1, status:[pasa:asmbl_8576,status:3], valid-1 NODE_62_length_47304_cov_39.4905 . gene 18608 23717 . - . ID=g4422;Name=g4422.t1 NODE_62_length_47304_cov_39.4905 . mRNA 18608 23717 . - . ID=g4422.t1;Parent=g4422;Name=g4422.t1 NODE_62_length_47304_cov_39.4905 . five_prime_UTR 23646 23717 . - . ID=g4422.t1.utr5p1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 23359 23717 . - . ID=g4422.t1.exon1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 23359 23645 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 22909 23020 . - . ID=g4422.t1.exon2;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 22909 23020 . - 1 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 22447 22545 . - . ID=g4422.t1.exon3;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 22447 22545 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 22307 22363 . - . ID=g4422.t1.exon4;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 22307 22363 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 21507 22106 . - . ID=g4422.t1.exon5;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 21507 22106 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 21298 21368 . - . ID=g4422.t1.exon6;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 21298 21368 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 20878 21025 . - . ID=g4422.t1.exon7;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 20878 21025 . - 1 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 20408 20494 . - . ID=g4422.t1.exon8;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 20408 20494 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 19945 20109 . - . ID=g4422.t1.exon9;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 19945 20109 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 19500 19706 . - . ID=g4422.t1.exon10;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 19500 19706 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 19101 19214 . - . ID=g4422.t1.exon11;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 19101 19214 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . exon 18608 18753 . - . ID=g4422.t1.exon12;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . CDS 18700 18753 . - 0 ID=cds.g4422.t1;Parent=g4422.t1 NODE_62_length_47304_cov_39.4905 . three_prime_UTR 18608 18699 . - . ID=g4422.t1.utr3p1;Parent=g4422.t1 #PROT g4422.t1 g4422 MASTSVFAGLKRVPKAQLDADGNEVQVEVRGDEEQRVKYEQIIELLLAAGYFRARISSLSQFDKVVGGMVWSITASNVGVDVDILFQENATIGQRIAVTEKIVAALPKMKCPQRIEPHQIQGLDCIHIFPVIQWLVKKVIEVREETGDYIRNFSVSQFHKEHSLPQDDEFALRKVFSIGTVQTVKESYKPVRKYRRPPKHDSRTARNAEDETNRVQATLLEYGHRYRVGRDDENADGSAGADGQKGTGGGLSSSRGAVKGVVGAQGQQGGLAGGASGGASGSSKEKEGENEALLEEERIKALMGVMSALSGDAAAVSTAAVGAMVGMQSDEISEMASAYAEKHAALVDGLGGSGAGSGAGGLAGHQRQTQSLEKQIAAREKRLAEIADEHASLAARHAELQEDVGKAAAYNARIDREAAKLDAMENESNSAALEQLRALVAINEALKRQEADFKASCKDEMARLQELIRSLGHDDGTDAEEAERIRQIDAQFEADREKMRKLRLLVGKKNRDIAAVQRKIDEVPSRAELSQYQRRFVELYNTVAAKLTETKQYFTLYNTLDDTRLYLSKEVSLLNSIHDNFERAMSTAQNKDQFLHQMESIVAGIKSNLDKVERKKADEKAKRDKLNDGYLQLVDAQRHYYKTVKEFQEECRKNELLQAKLKTGGQ* # PASA_UPDATE: g4423.t1, single gene model update, valid-1, status:[pasa:asmbl_8575,status:12], valid-1 NODE_62_length_47304_cov_39.4905 . gene 24322 30712 . + . ID=g4423;Name=g4423.t1 NODE_62_length_47304_cov_39.4905 . mRNA 24322 30712 . + . ID=g4423.t1;Parent=g4423;Name=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 24322 24477 . + . ID=g4423.t1.exon1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 24322 24477 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 24777 24938 . + . ID=g4423.t1.exon2;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 24777 24938 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 25167 25328 . + . ID=g4423.t1.exon3;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 25167 25328 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 25601 26260 . + . ID=g4423.t1.exon4;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 25601 26260 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 26517 27188 . + . ID=g4423.t1.exon5;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 26517 27188 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 27392 28008 . + . ID=g4423.t1.exon6;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 27392 28008 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 28152 28314 . + . ID=g4423.t1.exon7;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 28152 28314 . + 1 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 28503 28847 . + . ID=g4423.t1.exon8;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 28503 28847 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 28982 29341 . + . ID=g4423.t1.exon9;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 28982 29341 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 29568 29846 . + . ID=g4423.t1.exon10;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 29568 29846 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . exon 30219 30712 . + . ID=g4423.t1.exon11;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . CDS 30219 30611 . + 0 ID=cds.g4423.t1;Parent=g4423.t1 NODE_62_length_47304_cov_39.4905 . three_prime_UTR 30612 30712 . + . ID=g4423.t1.utr3p1;Parent=g4423.t1 #PROT g4423.t1 g4423 MFEKTLNDLIRGIRNNKNNEAKYISQIIEEIRKELKNPDVEIKANAVSKLAYLQMIGYDISWAAFNIIEVMSAHKFTLKRIGYSAACQSFHEGTDVLMLTTNMIKKDLASQNQFEAAIALNGLSNFITPDLARDLANDILTLVNSSRPIVRKRAVLILYKVFLRFPEALRPSFQRLKDKLEDPETGVQSAAVNVICELARKHPKNYLSLAPVFFKILTTSNNNWMLIKIVKLLGALTPLEPRLAKKLLEPLSAIITSTSAMSLLYECINTAITGMAQHQSIMQLCLSRLREFVEDKDQNIKYLGLCAMGKILAVYPKAVADQRDLVIRCLDDQDESIRLRALDLLVGMVSKKNLMDIVKRLLSHMGGSDGGLYRDELISKIIQMCSQSSYQYVTNFEWYVAILAELTRVDGTKHGRLIASQLMDVAIRVRVVRPFAVRQCAALLAAPHLTAHVTSTIPGSVAAGGNNSGVSEVLFAAAWIVGEFGGYLRTPLETVGVMLLPKVVNLPGHIQSVFVQNVLKVYASVVRRAAGHTPVDGDDSAEAFMSEEEAAGLAREVSAVLLARLPMFVQSPDLEVQERACCMLQLVKYIRAIEDEGGVEEAHKFATLFEGELNPVAPKAQKKVPVPDGLDLDAWINEPPAESSSESEDDAFTAPQNREVNLGGSRDARGKVESSEDEAGLEVKRQARKQAQALNPHYLKDRPSGKKGSSTSLPVNQVSKEDVDAIPVQRLDLGVKLTVDDTPNFFAGAATGSSADKKGKKGKKGKKGKKGEADSDDDRPAYVVNSAAEMPEGASLSDEEDRRRKEDPLSSLDVDLSAPLKDDERIPVRQHRVVAVPPAKEQTAVADSKASKKKKKEKETEKDESGKKKRDRKHKKGSDGEDSDAAAKHASKSKGEKGDKDDKKDKKDKKDKKEKKEKKEKHADKDKEVAPAVTAQVARLIDSPTPASPLPPREKDMAMSAFEKWMTADPVEEATTEKKKEKSSSRDISRENSADSLSAVGNAADVSSSGKKRSSKDKKSDEKEKEKETKETKEKEKRSSKDKKGSDDKKEKEKEKEKEERRSKRKDKERAESPAADLDEPAVPTTNYRPLANNADLAITYDARSVQTDSEHLYVMMILQNTSQCLLNGIEVAVVDTLNAKLVKGPVQTSGGGVSIPFALPTGTSNEAQIVFKVELISQAQRLRGSVQYRKQTPSGSTSEKVDFCLNVSVSAFIVPVTLRPADFKSVLEEGELCPAVSAKIVPKKEQPFRTHLFGICRALHLSIVEIDETRASLYGCTPRQHHVCALVKPVKSGGISVDLKATDGSIASALVDEIKEVLSRE* # ORIGINAL: g4707.t1 original gene structure, not modified by PASA NODE_668_length_19285_cov_48.4446 AUGUSTUS gene 7914 11492 . + . ID=g4707;Name=g4707.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS mRNA 7914 11492 . + . ID=g4707.t1;Parent=g4707;Name=g4707.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 7914 9498 . + . ID=g4707.t1.exon1;Parent=g4707.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 7914 9498 . + 0 ID=cds.g4707.t1;Parent=g4707.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 9892 11492 . + . ID=g4707.t1.exon2;Parent=g4707.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 9892 11492 . + 2 ID=cds.g4707.t1;Parent=g4707.t1 #PROT g4707.t1 g4707 MAATKAQKAEGRCYEMQGTCSSASDSSFVEGSAASTTAPKTTAASIVTRSVASVSAAGDAKQVRRRSRSHFAKNADSDVPALPPASAGGCLPKGLNWRMPSCEMADDAMVRILPARVRRRWPPWFGLVAVILCLVWMACGILGAAFMRDHLIQQQNDDVLGSVRGACGSIRSEIDGVLSHARSMLDAVAMSRIPYPNVTDEGLKKVASMWPNGVAWSRKRPAGVAWLIWLSRVPAANKSAWETANNATITEISGSTPALSPVAPRIEYFPVQSLFALGSNLTADPRMIGLDFGQWQLFPMRAAAILGKEGSSYPTAYTPTNILNSSTNALAGMYLPVYQGGDVPATPSERLAKFVGIAYGYINCTETIAALASSTRDDLDAARRGVHVIIADDTASPFTGGVPSFFVFARLAATGSPLSTIAKVRTRADVDALSPRGLNVMLDVRAGVQSWVISCVPSREYVDGFADGTPDVAAAGMVVLGLLMCILTLLVAKNRHVVLQRHRAIMTARDAAVLGERLANDMIGYVNHEIRNPLNGILGLLDLSAASVQQAAILNASLADSGAHDGHEQQARDSCHVRETANSVHMHLRTLLEDIATSRNCCQLISHIVNDVLDIRKIEEGRLILSLASLDARSVIHDAVRIIRPKLEEKPHLQLTVDCVNDLEIVSDRHRVQQLLLNFISNAVKFTDVGSICVRITIDNTAQSLDGHVLHGGGAIRFEVSDTGRGIPKERHACIFKPYVQVEPTDGTRYTGTGLGLFLCQRLVHLMGGTIGFDSEYGVGSTFWFSLPKNSPRASMSDDGGDCGTNQGAVGRVDVSKSRFVGVNKEDLGGGVASESIVVELDGMELVGGIATGDQSAVAAQCHTMSRAPEHASPAAGVSAWVRVHADTDKSLTSVASTVTSASPGTAEATPPKLPRLRLLVVDDVMVNRMVLRRQLESIGHDVTMCEDGKKAVEIARNRRFDGIFMDVQMPVMGGCDATTHIRASFPSAASAGEHETHSDVTVFGVTADITEGDVAQCTQSGMDAVLPKPVTLEMIVAALSRHFDATVQTLSRVCRKKQDD* # ORIGINAL: g4708.t1 original gene structure, not modified by PASA NODE_668_length_19285_cov_48.4446 AUGUSTUS gene 11799 13597 . - . ID=g4708;Name=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS mRNA 11799 13597 . - . ID=g4708.t1;Parent=g4708;Name=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 13504 13597 . - . ID=g4708.t1.exon1;Parent=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 13504 13597 . - 0 ID=cds.g4708.t1;Parent=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 12959 13371 . - . ID=g4708.t1.exon2;Parent=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 12959 13371 . - 2 ID=cds.g4708.t1;Parent=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 11799 12635 . - . ID=g4708.t1.exon3;Parent=g4708.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 11799 12635 . - 0 ID=cds.g4708.t1;Parent=g4708.t1 #PROT g4708.t1 g4708 MSSSASTHASSSASKVKPVKKGTTATAKAKSDNVATRTQGVTTEDIKSLQLALALGRALSSVTGGRSPHVIACHLHRSKLDANRDVEKAAHGDPLASAAHGEYHAFVERACAQAIAAFGFCHVFDIHGHGHKRNWIEIGVGLGALDLQKSDVEVNALSAKSSIRKLAEKAPLSTLIRGNASLGAYFDRHGQESVPSPSIPHPGGEHYFNGGYTVATHGARRTDGKNVAATQLEHPISLRRTKEARNLYAKCFAQSCVEYVRAWYGLDLIPSGTAPLPTRCPGCQRDVAGGHVANYAAASAVSQQQQQQHQQQQQQLYAQCGPGQSAAAPHISTLFQAQCCIGAPNCNPHASSSHPGVSSAGPPGYCAQPGWGAPPPHAAPPSAPVYGQQFGNPQQQQYPGYNAYGQQQQPQQPQQPQQPQQYPGYNAYGGQQPPPQYQPRPTAPGWQ* # PASA_UPDATE: g4706.t1, single gene model update, valid-1, status:[pasa:asmbl_8771,status:3], valid-1 NODE_668_length_19285_cov_48.4446 . gene 5550 7260 . + . ID=g4706;Name=g4706.t1 NODE_668_length_19285_cov_48.4446 . mRNA 5550 7260 . + . ID=g4706.t1;Parent=g4706;Name=g4706.t1 NODE_668_length_19285_cov_48.4446 . five_prime_UTR 5550 5763 . + . ID=g4706.t1.utr5p1;Parent=g4706.t1 NODE_668_length_19285_cov_48.4446 . exon 5550 7260 . + . ID=g4706.t1.exon1;Parent=g4706.t1 NODE_668_length_19285_cov_48.4446 . CDS 5764 6897 . + 0 ID=cds.g4706.t1;Parent=g4706.t1 NODE_668_length_19285_cov_48.4446 . three_prime_UTR 6898 7260 . + . ID=g4706.t1.utr3p1;Parent=g4706.t1 #PROT g4706.t1 g4706 MAPTNSRGMSIARRYESDITAMIRARRIPRDIEKQKVRALSKKLAKDTVDEVCSRFLPAEEKEMTPFLDDLRGMINEEYSRTEVDEDQKKAIRLRPTQYLALMLEVNRHDPKRKGLDLKKQKAEIKRWKRENGCSQARRKAGFRLSSYWWRTKRRMREDGSEDMSDDPSGMTGSEDELSLSGPAPVPVATPTALKQSVAMPLKVSTARRSKKSDAVTPLASIPKDDGFVAPLAPSAYAMRPMAAVSSSAAAPDYMGVALPQTPFSLLQFFNTMDALSGNVDMKVEDLNEIAHTPQVPDTLGQFDWMTPNFNELWAAAANNEAKKAYPTTASNTYANNAAVLQQQNAWSLGVVPEAALSLSLSRDGVHSMGDSVVPGM* # PASA_UPDATE: g4709.t1, single gene model update, valid-1, status:[pasa:asmbl_8768,status:12], valid-1 NODE_668_length_19285_cov_48.4446 . gene 14352 17619 . + . ID=g4709;Name=g4709.t1 NODE_668_length_19285_cov_48.4446 . mRNA 14352 17619 . + . ID=g4709.t1;Parent=g4709;Name=g4709.t1 NODE_668_length_19285_cov_48.4446 . five_prime_UTR 14352 14391 . + . ID=g4709.t1.utr5p1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 14352 14587 . + . ID=g4709.t1.exon1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 14392 14587 . + 0 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 14760 15135 . + . ID=g4709.t1.exon2;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 14760 15135 . + 2 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 15451 15619 . + . ID=g4709.t1.exon3;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 15451 15619 . + 1 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 15902 15976 . + . ID=g4709.t1.exon4;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 15902 15976 . + 0 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 16369 16797 . + . ID=g4709.t1.exon5;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 16369 16797 . + 0 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . exon 17011 17619 . + . ID=g4709.t1.exon6;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . CDS 17011 17139 . + 0 ID=cds.g4709.t1;Parent=g4709.t1 NODE_668_length_19285_cov_48.4446 . three_prime_UTR 17140 17619 . + . ID=g4709.t1.utr3p1;Parent=g4709.t1 #PROT g4709.t1 g4709 MADDGGVLMQGSNEEGEFNDDDDDDAESIGSNDHYSDDDEGVVEYGGRGDADDRKSIGSSEEETEGPVDLSMLPPKVKLERAMAEFEAHVAARRHEEAMRALAVGLSLNRIIYGQFHWRTARAHLDMARAYLELKSLHAQALTHAEKARDVWAASPQAHRHTAEEGGVAASGALVAEIFCVMGTCLSHLDKFSDAEEALHKAEKSLSTGGAVDAASPMMLDVRIIHEMGRLQVRQGRFDRAFERLSKAQETLWGRDGSQTALMAAIARDLGHVEQKRNNIEDAVRWSVYAHEIAAAVHGKRAKETARALRQAALAYIASGEDDDAEPLVSECVLSLEFACGADEPRSLEMREEWGRLLARQGKPKEALRVLRRLAQSQSLACGQRSIQLGDTRKLMATLYLSIGDIDNAVKYFNKTFLIYKQHFGVENARTKEIVGILASISKDARPKEVLATTKWK* # ORIGINAL: g4705.t1 original gene structure, not modified by PASA NODE_668_length_19285_cov_48.4446 AUGUSTUS gene 447 3802 . + . ID=g4705;Name=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS mRNA 447 3802 . + . ID=g4705.t1;Parent=g4705;Name=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 447 601 . + . ID=g4705.t1.exon1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 447 601 . + 0 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 764 975 . + . ID=g4705.t1.exon2;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 764 975 . + 1 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 1166 1236 . + . ID=g4705.t1.exon3;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 1166 1236 . + 2 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 1557 1654 . + . ID=g4705.t1.exon4;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 1557 1654 . + 0 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 1980 2172 . + . ID=g4705.t1.exon5;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 1980 2172 . + 1 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 2525 2650 . + . ID=g4705.t1.exon6;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 2525 2650 . + 0 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 2867 3016 . + . ID=g4705.t1.exon7;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 2867 3016 . + 0 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 3274 3356 . + . ID=g4705.t1.exon8;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 3274 3356 . + 0 ID=cds.g4705.t1;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS exon 3571 3802 . + . ID=g4705.t1.exon9;Parent=g4705.t1 NODE_668_length_19285_cov_48.4446 AUGUSTUS CDS 3571 3802 . + 1 ID=cds.g4705.t1;Parent=g4705.t1 #PROT g4705.t1 g4705 MQIGPTAHIVELQRLTGMCRTADGAIVKHYERDPLLVPAQLLPPSAPRPDDRYTETQALPVGERLVKGGTVIYVGKGDLYGSVGTIAAVDARGRFIVSAEATRTGPGTGAVVSKNDEGFMTQSALASKLGVPLHVISKLTGSVTVIIDDDTTAEIGLTIKFSKKQLCVPGYSHFIPRPGSGNDSGTWEFSSKAFNMISDFKAKFPDVLRGIDADLDARKYPVETLFLNEENKPVENPMERLVELLTYLRSLETARMILAPVSSQLLSSATVRQIEDSTRNIRPPEVVELRNVLPTQLLSPGNLPLLNAHGIVPLPGLGCRVISMRESGPVPLGLRGTVVGVLRDNAEVVFDRPFLAGTDLHGRCSDRRGAAVPLHSLLNLSAPDFAVASEDAPARSPAKGGSVSSTPVKTPGKTPGKTPGKTPGKSGGAQNMFAALMDD* # ORIGINAL: g4211.t1 original gene structure, not modified by PASA NODE_4073_length_2238_cov_34.8484 AUGUSTUS gene 766 1758 . + . ID=g4211;Name=g4211.t1 NODE_4073_length_2238_cov_34.8484 AUGUSTUS mRNA 766 1758 . + . ID=g4211.t1;Parent=g4211;Name=g4211.t1 NODE_4073_length_2238_cov_34.8484 AUGUSTUS exon 766 1758 . + . ID=g4211.t1.exon1;Parent=g4211.t1 NODE_4073_length_2238_cov_34.8484 AUGUSTUS CDS 766 1758 . + 0 ID=cds.g4211.t1;Parent=g4211.t1 #PROT g4211.t1 g4211 MAFNGYNMFANENVAHELSLMEQVINNFTAWLVEREIATKENIDSLTGGLAPAPDGTERLRQHGFVPQCVRHINHNIRSTRDVTVHAAPQLSSDGGPPASVSGGGRSAPAGHAVQPAALWTPSPANPLTAASQSHPSHLLQHFHSAPDVVNSLNRISQAVTNLVNFLPPPVQLGGDSNALIAATAGVNNRQTAGAQAAANLVAPAPSGALPPGVRPDVPLASLQVGLLPVPHDLNSLVAQWEQGIPGIAQQLPMSQWQAKGASGYGLAGSQVINAVSKRRVIYVAFVTHAGRQHARFYALFGPFQFTATFAKVSKYNSELRRAQNNNASG* # PASA_UPDATE: g3466.t1, single gene model update, valid-1, status:[pasa:asmbl_6721,status:3], valid-1 NODE_390_length_24975_cov_49.3723 . gene 3710 8025 . - . ID=g3466;Name=g3466.t1 NODE_390_length_24975_cov_49.3723 . mRNA 3710 8025 . - . ID=g3466.t1;Parent=g3466;Name=g3466.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 7736 8025 . - . ID=g3466.t1.utr5p1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 7655 8025 . - . ID=g3466.t1.exon1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 7655 7735 . - 0 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 7364 7528 . - . ID=g3466.t1.exon2;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 7364 7528 . - 0 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 6798 6857 . - . ID=g3466.t1.exon3;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 6798 6857 . - 0 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 6365 6497 . - . ID=g3466.t1.exon4;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 6365 6497 . - 0 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 6094 6159 . - . ID=g3466.t1.exon5;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 6094 6159 . - 2 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 5621 5709 . - . ID=g3466.t1.exon6;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 5621 5709 . - 2 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 5439 5518 . - . ID=g3466.t1.exon7;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 5439 5518 . - 0 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 4503 5095 . - . ID=g3466.t1.exon8;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 4503 5095 . - 1 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . exon 3710 4118 . - . ID=g3466.t1.exon9;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . CDS 3892 4118 . - 2 ID=cds.g3466.t1;Parent=g3466.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 3710 3891 . - . ID=g3466.t1.utr3p1;Parent=g3466.t1 #PROT g3466.t1 g3466 MAGNSFSYWAPCLVIWMPVAANVAEAQKKIPRSASPPTNQQSTFDYGANNATWIQIAVIVAVLLAIVLLSSKRVRFYMLNWEDFYYSFRMKRELTKQLEKQKNFIETQSAQLAKTPEIIRGFSRRHSNSGISLNDYTNLIEKKCMLESFKAQYVIDIINNAPSDVLGYGTLLSISTTPMSPFDFFHENGEPHLSFRIKIGTSKQRLSEFSESNLPFAIMPSGKLSFIMKPTDDGVPLELLDADEGLYSSDSRARHARKRFLHLSHTYSLIDGNGASDAWLAGFKSTETDRTASNNRHQVPKAPQPRSRKGGRRQQQQHQVRNSSSYNNNGNNNNNNVIACVNGTDINNGDDSIGAEDHVDSDARTPRLFFPPFNAAKDNGRCVFTGRSHVISAPFKRNAGRFEIALHEIEPVLYMFAQGNSGERRCLTWIIKDIMVVVPCAVLEKITRKWSEMSGSSNKVTHSPNNGQGTPADTPSVRGSDAEDSGSAHSHHLRLGE* # PASA_UPDATE: g3468.t1, single gene model update, valid-1, status:[pasa:asmbl_6719,status:3], valid-1 NODE_390_length_24975_cov_49.3723 . gene 13069 14416 . + . ID=g3468;Name=g3468.t1 NODE_390_length_24975_cov_49.3723 . mRNA 13069 14416 . + . ID=g3468.t1;Parent=g3468;Name=g3468.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 13069 13568 . + . ID=g3468.t1.utr5p1;Parent=g3468.t1 NODE_390_length_24975_cov_49.3723 . exon 13069 14416 . + . ID=g3468.t1.exon1;Parent=g3468.t1 NODE_390_length_24975_cov_49.3723 . CDS 13569 14261 . + 0 ID=cds.g3468.t1;Parent=g3468.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 14262 14416 . + . ID=g3468.t1.utr3p1;Parent=g3468.t1 #PROT g3468.t1 g3468 MPAIIIPLPASQAAVVKSDMKLVIVKPPFPIVGHTNPAVAASPKPSPKRTAAPVKKILAGKQSTLNSETSLPHTAAGDAIEFERTLNGRQGSGQCMLLEKMLAIANAAKDPVLKREETRELFTFVFSYCGRGASRKDVLRFLDHLATLARTHSLRVTVLTKAGINAVIAIGLHDAEPGYDVCTMQSLAKETKEEGAFKSLGIEDAAFLRCKAARRVKILVEISKVSCPNA* # PASA_UPDATE: g3465.t1, single gene model update, valid-1, status:[pasa:asmbl_6715,status:12], valid-1 NODE_390_length_24975_cov_49.3723 . gene 184 3228 . + . ID=g3465;Name=g3465.t1 NODE_390_length_24975_cov_49.3723 . mRNA 184 3228 . + . ID=g3465.t1;Parent=g3465;Name=g3465.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 184 200 . + . ID=g3465.t1.utr5p1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 184 669 . + . ID=g3465.t1.exon1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 201 669 . + 0 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 1006 1111 . + . ID=g3465.t1.exon2;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 1006 1111 . + 2 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 1325 1457 . + . ID=g3465.t1.exon3;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 1325 1457 . + 1 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 2002 2148 . + . ID=g3465.t1.exon4;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 2002 2148 . + 0 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 2402 2491 . + . ID=g3465.t1.exon5;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 2402 2491 . + 0 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . exon 2891 3228 . + . ID=g3465.t1.exon6;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . CDS 2891 3091 . + 0 ID=cds.g3465.t1;Parent=g3465.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 3092 3228 . + . ID=g3465.t1.utr3p1;Parent=g3465.t1 #PROT g3465.t1 g3465 MPADQSAVDRLKVQFCISLAVRTGRPMPVVGSPRSPRNAHGSDNESDGASSDSQRERNNSNISNSSINANSGNTGSSNNVNAVNGTANTGSVTKLAIEGASSQQPSFEIPKGPSAVTIDAMPTDPHVTSACLLQFLMQLPNPLLTFELYDRFIGTEAVKNDRDRLEAVTQLLKTLPASHFKATRFVMEHLCRVARKSRSNKMSAEKLAAVFAPVILRPHSDGMAMATLLDSASQAKVVENLITNCARIFDMRVAALHWGVTFSNLLADADGVHLFRLFLRREYSEENIDFWLACERYARTQDELARLEMAAKIYKTHLRPGCASEVNVDSHSREFARIAIEKGDPNEAMFVPAQSLVYELMRADGYMRFLRSAEYVALIEV* # PASA_UPDATE: g3469.t1, single gene model update, valid-1, status:[pasa:asmbl_6717,status:3], valid-1 NODE_390_length_24975_cov_49.3723 . gene 14666 19461 . + . ID=g3469;Name=g3469.t1 NODE_390_length_24975_cov_49.3723 . mRNA 14666 19461 . + . ID=g3469.t1;Parent=g3469;Name=g3469.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 14666 14775 . + . ID=g3469.t1.utr5p1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 14666 14832 . + . ID=g3469.t1.exon1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 14776 14832 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 15092 15220 . + . ID=g3469.t1.exon2;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 15092 15220 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 15357 15479 . + . ID=g3469.t1.exon3;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 15357 15479 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 15653 16330 . + . ID=g3469.t1.exon4;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 15653 16330 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 16527 16727 . + . ID=g3469.t1.exon5;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 16527 16727 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 16925 17278 . + . ID=g3469.t1.exon6;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 16925 17278 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 17544 17666 . + . ID=g3469.t1.exon7;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 17544 17666 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 18062 18233 . + . ID=g3469.t1.exon8;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 18062 18233 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 18433 18527 . + . ID=g3469.t1.exon9;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 18433 18527 . + 2 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . exon 18928 19461 . + . ID=g3469.t1.exon10;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . CDS 18928 19014 . + 0 ID=cds.g3469.t1;Parent=g3469.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 19015 19461 . + . ID=g3469.t1.utr3p1;Parent=g3469.t1 #PROT g3469.t1 g3469 MGSGRKNSVAPDGGSKGQEEKPDYDTPAGPIQNRRCRDIPMLIIFLAFWCGMAYIAGQSFHMGDPARLLYGYDSYGNICGKSNNGRFVNVTGSIPGVTNADLSDRKYLLFFDATSSSALQICVKACPSTSGVPSLALAQQLGLCRYDFDYSQFNSGTFLGQLGSTGPCPALIYTSMSVVHRCLPKIIDSSDVAAIAQSNGIVSLTDAKKVVQTVLSDVGTAWKEMLYSVAICVVVGMLFVLLMRFFAPLLIWATVLAVVVGSAGLTAFLFFEYKDSKKTLDALEEANQTSEQKRNVKMFLGLAITAAIVTVILLLLLLILRKRIKLCIMIFREASKAIAKMPLVMLAPIFTFCSLLLFIAYWIFVYMYLASAGVPSLDPTTGMVSYTMDKSLEYMQWYHIFGGLWTANLFIAIQQCTIAGGIATYYWTRDKSKSATLPVFRAFLRSITYHLGSLAFGALIIAIVQMMRIILGYIQWKLKGKETKVVKFILGCLACCLWCLEKFLKFLNRNAYIEIAVYGYSFCGAAQKAFWLLFRNAARVAVINSIGDFCLFLGKVAIAASAGLVSMAFLHGKSDLTYWAVPVFLVTVFGFFVGHCFMSTFEMAVDTIFLCFCEDCERNDGSDEKPYYMPLDMMHLADSDAAERIEKGEKKKKRKKKKNSDGDKDGTVSVEA* # ORIGINAL: g3471.t1 original gene structure, not modified by PASA NODE_390_length_24975_cov_49.3723 AUGUSTUS gene 23336 24838 . + . ID=g3471;Name=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS mRNA 23336 24838 . + . ID=g3471.t1;Parent=g3471;Name=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS exon 23336 23488 . + . ID=g3471.t1.exon1;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS CDS 23336 23488 . + 0 ID=cds.g3471.t1;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS exon 23678 24253 . + . ID=g3471.t1.exon2;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS CDS 23678 24253 . + 0 ID=cds.g3471.t1;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS exon 24637 24738 . + . ID=g3471.t1.exon3;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS CDS 24637 24738 . + 0 ID=cds.g3471.t1;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS exon 24815 24838 . + . ID=g3471.t1.exon4;Parent=g3471.t1 NODE_390_length_24975_cov_49.3723 AUGUSTUS CDS 24815 24838 . + 0 ID=cds.g3471.t1;Parent=g3471.t1 #PROT g3471.t1 g3471 MAFEAARNGDLGELMRHMRGDVNRPLEYGQRYLHVVATGGHVDCVEWLISQGADPNIATDSMRTPLHLAATNGHIECMRSLIAAGANVSALAIARQSPLHYAARGPRETALDCVRLLLQHGADPWFAGTDNGLAMHAAATESNDDCAHYLACLDANEGPVDVNEHRESLGGIVEERPRLCNARMRTGRTVLHIAAEHGNADLCRRLCAIPGIKTSERASLGETPLHFAAHAGSIDCCRVLITEGNCKVNARTNDGRTPAHIAAAAAQAQCLEWLLVEFASFLLR* # PASA_UPDATE: g3470.t1, single gene model update, valid-1, status:[pasa:asmbl_6723,status:3], valid-1 NODE_390_length_24975_cov_49.3723 . gene 19559 22600 . - . ID=g3470;Name=g3470.t1 NODE_390_length_24975_cov_49.3723 . mRNA 19559 22600 . - . ID=g3470.t1;Parent=g3470;Name=g3470.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 22544 22600 . - . ID=g3470.t1.utr5p1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 22463 22600 . - . ID=g3470.t1.exon1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 22463 22543 . - 0 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 22126 22251 . - . ID=g3470.t1.exon2;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 22126 22251 . - 0 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 21689 21807 . - . ID=g3470.t1.exon3;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 21689 21807 . - 0 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 21515 21573 . - . ID=g3470.t1.exon4;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 21515 21573 . - 1 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 21150 21343 . - . ID=g3470.t1.exon5;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 21150 21343 . - 2 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 20824 20889 . - . ID=g3470.t1.exon6;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 20824 20889 . - 0 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . exon 19559 20225 . - . ID=g3470.t1.exon7;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . CDS 19662 20225 . - 0 ID=cds.g3470.t1;Parent=g3470.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 19559 19661 . - . ID=g3470.t1.utr3p1;Parent=g3470.t1 #PROT g3470.t1 g3470 MASSTPNEVEKESTDMDNVFDIRLAEEASACQFQSELQDMLYAMGVPKEPSEDVTIFLEEYVLDELITLIGSVIEATAERGGRSITTEDVLYQLRKDATITKRVLDYLRWREVRKRVAKEAVDEEEDEEEADLGVSSESTLDATGGSSVAGKQGVRASWSLLDDVYAAAGMDAGEWAADSDATAAEEMKRRMKRADVRTREMTHDEYMLYSERRKVCFANKRNRNKFRTWLCIRYPVTCHDSTIDPAVTDQLLEFTEETLDILAIVAYEKVARMTEASLLVKEERDLLVSNSESGRTQIPSAVTESSPGRRQSLVDTDASFWQRQSSRGSGGLARPQAAPQSQSATLRSSPSSLFGAHSHARTSITRDHICEALRRLRRERRPMRVLERVRPRNAALGSLLL* # PASA_UPDATE: g3467.t1, single gene model update, valid-1, status:[pasa:asmbl_6716,status:3], valid-1 NODE_390_length_24975_cov_49.3723 . gene 8711 12873 . + . ID=g3467;Name=g3467.t1 NODE_390_length_24975_cov_49.3723 . mRNA 8711 12873 . + . ID=g3467.t1;Parent=g3467;Name=g3467.t1 NODE_390_length_24975_cov_49.3723 . five_prime_UTR 8711 8805 . + . ID=g3467.t1.utr5p1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 8711 8880 . + . ID=g3467.t1.exon1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 8806 8880 . + 0 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 9086 9141 . + . ID=g3467.t1.exon2;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 9086 9141 . + 0 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 9292 10150 . + . ID=g3467.t1.exon3;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 9292 10150 . + 1 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 10425 10563 . + . ID=g3467.t1.exon4;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 10425 10563 . + 0 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 10810 10958 . + . ID=g3467.t1.exon5;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 10810 10958 . + 2 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 11339 11549 . + . ID=g3467.t1.exon6;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 11339 11549 . + 0 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 11755 11910 . + . ID=g3467.t1.exon7;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 11755 11910 . + 2 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . exon 12191 12873 . + . ID=g3467.t1.exon8;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . CDS 12191 12318 . + 2 ID=cds.g3467.t1;Parent=g3467.t1 NODE_390_length_24975_cov_49.3723 . three_prime_UTR 12319 12873 . + . ID=g3467.t1.utr3p1;Parent=g3467.t1 #PROT g3467.t1 g3467 MSVNVLVPGGRRINVKTTPTMTLLQILETICEKQKLDVKTCGLKRENARVMLDLSLNLRFANIPNNGNLELVTNQIARIESDVVIFLQMDTGTRLQHPFPPSTTLWEILSHWDARLDGQLLYRADESGNWLVPVCVYINQQFQGPVSLSGTPLRQIGLTKGSAVIRVLHAPSGGVAVEQAKVDHPPTLPALTASSVPATAADSSTTSATVSAVAHVTSNASTESTLGVNALQSNAGGKRSRDDDGVTMHAAILREGASAVKVAGSVYEDNSGNGVTPMDIDRADEPKPLLPPQARALVEGNGKGKGKAAESTCTVDTEPEQELRPFANFKFPDAPAAKQMNVPDMPEGVTGPTLPVDRRVVVFSAASETQSVTLNTGDLPDEFYDVTKEDVMKMLRDVDKERESEQLMTRTLRNELRQKSAEKYGRTVIRIRFPCRTVIQALFAPTEPLSAVFEFARTCLTSTTPAFYLYTSPPKEVLSNSTTTKLFEAGLSPAALVYFGLEQPLALEDWKRDEMLSAELLSAASSVDDANREYRTRNGERVGHGGTEEVSTQSVAHPQASSRVFSSISPASGSSSSGSAKGPKWLKLGK* # ORIGINAL: g466.t1 original gene structure, not modified by PASA NODE_3123_length_4251_cov_40.6801 AUGUSTUS gene 3854 4198 . - . ID=g466;Name=g466.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS mRNA 3854 4198 . - . ID=g466.t1;Parent=g466;Name=g466.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS exon 3854 4198 . - . ID=g466.t1.exon1;Parent=g466.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS CDS 3854 4198 . - 0 ID=cds.g466.t1;Parent=g466.t1 #PROT g466.t1 g466 MCHRRKAITMEPPSAGTVVTPVQPPSENDAATHNNHVTEGIAFYGTFGGAFFSQSNRKFASAATAPPDWPPLYGFLPEWPSTAQGRAVRALERRSYQELMTPPITVTLPYYKTI* # ORIGINAL: g464.t1 original gene structure, not modified by PASA NODE_3123_length_4251_cov_40.6801 AUGUSTUS gene 290 2002 . - . ID=g464;Name=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS mRNA 290 2002 . - . ID=g464.t1;Parent=g464;Name=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS exon 1726 2002 . - . ID=g464.t1.exon1;Parent=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS CDS 1726 2002 . - 0 ID=cds.g464.t1;Parent=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS exon 1335 1397 . - . ID=g464.t1.exon2;Parent=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS CDS 1335 1397 . - 2 ID=cds.g464.t1;Parent=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS exon 290 1236 . - . ID=g464.t1.exon3;Parent=g464.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS CDS 290 1236 . - 2 ID=cds.g464.t1;Parent=g464.t1 #PROT g464.t1 g464 MAEEIDAVNQQIAAVEGLIVNVAKEILEADEQLRHIEQALREPSRAGEYAELKVDREYYREKKSKLREEKNKLLDEKNSLLDEKNILLQRGSVLERMDRFESFLQSRLPPRKKSVRLSQIDSVLEQNLVQATALKRGFREFRLSAKDVASRRFSEIPAAFVWDERTESAQSDRYIPFIRSQISNPDPDHTFRVKKCQQNTHDISAEWLPADLEGCADAVVIDHSAEESSLDVIRLCTRVAFELKKVEVNEAAYLRQGVGELVAAAAHSIYPVLHVLTDLATWFHFMWYELNAESERVLVVSETADRGVAWLFINSFLEASTGSTGVNWGEIFLNSASFVPVVMNSPVTSVNVAAATGLPPVGSSIARLPLPPSSGDIGNVDDLLDCMSAEDARDTFMLNLYTEIRRSHFFADLFAPSHVRGTPEHMHS* # ORIGINAL: g465.t1 original gene structure, not modified by PASA NODE_3123_length_4251_cov_40.6801 AUGUSTUS gene 2795 3301 . + . ID=g465;Name=g465.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS mRNA 2795 3301 . + . ID=g465.t1;Parent=g465;Name=g465.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS exon 2795 3301 . + . ID=g465.t1.exon1;Parent=g465.t1 NODE_3123_length_4251_cov_40.6801 AUGUSTUS CDS 2795 3301 . + 0 ID=cds.g465.t1;Parent=g465.t1 #PROT g465.t1 g465 MKIIPDDGMVQVVRICCDGEGPSRPFVESLLFPKSHSMVRSAAACTPRGTCPVPALLGFPIVMRRTEPDKGCSRNALGNNWATWFMISPETGFAPPEWLDDVGPVLIFRLNHAPLSIDDVAILNDAIFNGLFDRYASGRVRPADITPLLLDRHKHRHILNTPNAVVNC* # PASA_UPDATE: g2235.t1, single gene model update, valid-1, status:[pasa:asmbl_5129,status:12], valid-1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . gene 290 4491 . - . ID=g2235;Name=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . mRNA 290 4491 . - . ID=g2235.t1;Parent=g2235;Name=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . exon 3954 4491 . - . ID=g2235.t1.exon1;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . CDS 3954 4491 . - 0 ID=cds.g2235.t1;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . exon 2268 3555 . - . ID=g2235.t1.exon2;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . CDS 2268 3555 . - 2 ID=cds.g2235.t1;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . exon 664 1953 . - . ID=g2235.t1.exon3;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . CDS 664 1953 . - 1 ID=cds.g2235.t1;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . exon 290 400 . - . ID=g2235.t1.exon4;Parent=g2235.t1 NODE_2858_length_4933_cov_40.3814_potentialcontaminant . CDS 290 400 . - 1 ID=cds.g2235.t1;Parent=g2235.t1;3_prime_partial=true #PROT g2235.t1 g2235 MWMDTAQTKPPHPSPLIREFVQAGQRWRRRKRFLQIAIAIACACACIGFAIGSLLQSAESTRLKRQAEQDKATAEHISSFAQHEYKVSESRRFLGSAQQRLASGHPGDGYFYLSQALKSAVKTSEWEAMAEVATASQALLSFALEYPTGYQWKSLLGMSSYSASIDFDVGGNYVLSGGFDPYLGLWNIFTSAFASISLTPVIEKLARFSFSVLNVQNLHSNGIVLAKIDKGRTGTLATAMWYAFNSTNAFAGGSSPLVDTCGSSSGASTALVSRASRSIVFLVCPAGHMIVWNLANRDVYASAMTTLHRPADMLEDLFLDSSDVHAAFSTNGTADGKCVAYALTAYTPTIASAGTYFLAIVALRIDAPSLSMRFLRNQSQPQSDVSSLAFASDFTAFPGDFLVVGYTDGTVDMFNVTALCRAASSAGVDLSALPAVAGVPVALPVVRVNVTSVLVNSTDWVLDANAASSPLRSGKVSVICKPTARDMLYVGAATGSAVFTVSADVTGTPVLKAWTSGLLRGGHVSASLGCTAAVVDGFGDGYVVLDLTLERSLRLRGPAPPAYSRFLIVADGRTVVSVAGDVTSMYNLDDSVRLVADARRCADELVEYRLNAFYTSGNDYIVADADSLRKGNVVALCGMFNEVRLMHIVTSEPFKYPFHLAAPFTSIGNSNARVTINDIDATPTVGIVVAAGNNGVLLTWPNVPDVVTAVELDVPYSIAYNDSSAGDLFTVNFADRYNSAFVAGRKKALSFDVPSCWTCRSTSQLGSAPRTLVYAAHGMASSAWIAASSRWSTTSAVFSWAVKASGLMWMHSRADSAVVRLVTSNVTSALCPPVDGATLPGPNEGLGTTAAVAVSPDGRIVAMGTSTYQTFLFWNPAVVAGLPSTTASIAMPLVEASCRSLITSIVTCPLNTDANERMCKLQSLAFTTDSRLLATAHSDGSVSVWALNADPPGSGRAPFTQVAILPSSGILATALTFSNDGAWLAVGDEMGVVRAFGGMGVVGRSGVFYNGTLGWPFTMQQYASQSRRVFQLSFNANDNLLFSAGDDNDVCVYNVTSTCTAGASMIVTSLSSQTK # PASA_UPDATE: g8450.t1, single gene model update, valid-1, status:[pasa:asmbl_1942,status:12], valid-1 NODE_1551_length_10522_cov_50.2903 . gene 4670 6398 . - . ID=g8450;Name=g8450.t1 NODE_1551_length_10522_cov_50.2903 . mRNA 4670 6398 . - . ID=g8450.t1;Parent=g8450;Name=g8450.t1 NODE_1551_length_10522_cov_50.2903 . exon 6320 6398 . - . ID=g8450.t1.exon1;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . CDS 6320 6398 . - 0 ID=cds.g8450.t1;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . exon 5751 5863 . - . ID=g8450.t1.exon2;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . CDS 5751 5863 . - 2 ID=cds.g8450.t1;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . exon 5042 5479 . - . ID=g8450.t1.exon3;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . CDS 5042 5479 . - 0 ID=cds.g8450.t1;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . exon 4670 4827 . - . ID=g8450.t1.exon4;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . CDS 4759 4827 . - 0 ID=cds.g8450.t1;Parent=g8450.t1 NODE_1551_length_10522_cov_50.2903 . three_prime_UTR 4670 4758 . - . ID=g8450.t1.utr3p1;Parent=g8450.t1 #PROT g8450.t1 g8450 MHPLLQGHLSLSFLQHSLVVESFRGKDPTMAEETAVAPVENAQEVKLFGSWNLEEVEVSDISLTDYLAIKQKYATYLPHTAGRYSVKRFRKAQCPIVERMVNCLMMHGRNNGKKLMAVRIVKQTFEIIHLVTGENPVQVLVNAIINSGPREDSTRIGSAGTVRRQACDVSPLRRVNQALSLLTVGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR* # PASA_UPDATE: g8449.t1, single gene model update, valid-1, status:[pasa:asmbl_1939,status:12], valid-1 NODE_1551_length_10522_cov_50.2903 . gene 483 3941 . + . ID=g8449;Name=g8449.t1 NODE_1551_length_10522_cov_50.2903 . mRNA 483 3941 . + . ID=g8449.t1;Parent=g8449;Name=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 483 648 . + . ID=g8449.t1.exon1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 483 648 . + 0 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 886 1073 . + . ID=g8449.t1.exon2;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 886 1073 . + 2 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 1359 1601 . + . ID=g8449.t1.exon3;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 1359 1601 . + 0 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 1895 2182 . + . ID=g8449.t1.exon4;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 1895 2182 . + 0 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 2388 2524 . + . ID=g8449.t1.exon5;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 2388 2524 . + 0 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 2836 2923 . + . ID=g8449.t1.exon6;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 2836 2923 . + 1 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 3083 3377 . + . ID=g8449.t1.exon7;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 3083 3377 . + 0 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 3590 3664 . + . ID=g8449.t1.exon8;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 3590 3664 . + 2 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . exon 3895 3941 . + . ID=g8449.t1.exon9;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . CDS 3895 3905 . + 2 ID=cds.g8449.t1;Parent=g8449.t1 NODE_1551_length_10522_cov_50.2903 . three_prime_UTR 3906 3941 . + . ID=g8449.t1.utr3p1;Parent=g8449.t1 #PROT g8449.t1 g8449 MNEEILCKEFGGYGPLASVKIYWPRTDEEKKRSRMCGFVAYMVRADAERAYRELQGKIIHGTDIKLAWSKAVPIPPQPVYQQAGAEPLPPSSGLPFNAQELGAGRAGTGVYGSVPPPSGGAAIPPPGAIAPAVVSADGDTPLESTEVRVVLPGDPAMLKRIHRVIEFVVLEGPLFEAALMSREKGNPDFRFLFENWSPEHIYYRWRLYATLMGEGARSFRSESFRMFKGGSMWLPPQDTQLPAPVTDAVAPLKKGALPPQLKDEFEHMLRSLTVERGRVADAMAFCLDNAECAEEIVEMLVASLQVQEPLLASKVARLFLVSDILHNSSANVKNASHYRRGLEAALPKIFEALNGAYLGITSRMRAEQFKVYVINCVRAWESWSVFTPDATARLREAFLSNPHKGDQAGAQATQQAIQQSTQQTSQRASARVEVHAVVKDVPPSQAVHALPLMRLPIDYDDDDLDGVPLNQSATSKYQNTVVEAYDDDIDGAPMSM* # PASA_UPDATE: g8451.t1, single gene model update, valid-1, status:[pasa:asmbl_1940,status:12],[pasa:asmbl_1941,status:12], valid-1 NODE_1551_length_10522_cov_50.2903 . gene 6949 10425 . + . ID=g8451;Name=g8451.t1 NODE_1551_length_10522_cov_50.2903 . mRNA 6949 10425 . + . ID=g8451.t1;Parent=g8451;Name=g8451.t1 NODE_1551_length_10522_cov_50.2903 . five_prime_UTR 6949 7469 . + . ID=g8451.t1.utr5p1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . exon 6949 8936 . + . ID=g8451.t1.exon1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . CDS 7470 8936 . + 0 ID=cds.g8451.t1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . exon 9267 9359 . + . ID=g8451.t1.exon2;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . CDS 9267 9359 . + 0 ID=cds.g8451.t1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . exon 9565 9664 . + . ID=g8451.t1.exon3;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . CDS 9565 9664 . + 0 ID=cds.g8451.t1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . exon 10005 10120 . + . ID=g8451.t1.exon4;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . CDS 10005 10120 . + 2 ID=cds.g8451.t1;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . exon 10344 10425 . + . ID=g8451.t1.exon5;Parent=g8451.t1 NODE_1551_length_10522_cov_50.2903 . CDS 10344 10425 . + 0 ID=cds.g8451.t1;Parent=g8451.t1;3_prime_partial=true #PROT g8451.t1 g8451 MGDNPVPPPRFRGDRTESVSGAKPSYSAPLPPRSPSVSIPHRPPAPNKPQPSLPTSNSAPSMGSPGSTVRRGPPPPPKAVVPPSVAAQTIHSPGPRPSVGNIQLSTGEPLSSEPVSLNDDKKEGAGAKIFRIFKSKAPSEDKAKKLQISGPTDFVHEVHVGFDPDSGEFTGLPQHWKVLLDMSGISKKEQAKNPQAVLDVLDFYTDANKDKDAADIGGKFMKFTGGSAASGNPPPPQKSPAVLKGSITSTGGSASPATPSSPLPPALNRDAKPKTSFVGGSVSGSSPLKPPGVAPTASATAAAAAKKPPPPIAPRPEHTLSIMTKDIDEDEKKAAPAVAKAPVKPAGGATTPTKGAQSPTTAKKDVGGTPAAAASPANAAGQQQRRDNNKKGNKVSDDEVMARMRAVVSKEDPRKVYTGQVKIGQGASGTVYTATDINTGDVIAIKQMNLAQQPKKDLIINEILVMRENKHPNIVNYVNSYLVNDEELWVIMEYLAGGSLTDVVTTSIMTEAQIAAVCRECLQALEFLHSNAVIHRDIKSDNVLLGEHGDVKLTDFGFCATLTPEQSKRTTMVGTPYWMAPEVVTRKQYGPKIDIWSLGIMAIEMIEGEPPYLNENPLR # ORIGINAL: g2440.t1 original gene structure, not modified by PASA NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS gene 2997 5555 . - . ID=g2440;Name=g2440.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS mRNA 2997 5555 . - . ID=g2440.t1;Parent=g2440;Name=g2440.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 2997 5555 . - . ID=g2440.t1.exon1;Parent=g2440.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 2997 5555 . - 0 ID=cds.g2440.t1;Parent=g2440.t1 #PROT g2440.t1 g2440 MSAKVEACIRVIPDYPKVGVKFRDVGPLLADNEQREHAFDLMAGMVADLAPDVIAGLDARGFIFGTALAGRLGCGFVMIRKPGKLPGETVSRSYNLEYGSNVLEVQTGAIKSGARVLLVDDVLVTGGTLLAACQLVEEIGGVVIGSACLVEIAGLISDERRNKLAVRCVFTYNGDDVTINVPTTVAPTAPTAPTASTAPTAPTATTPPATPPVSTPSTITPPVSIGQPYERFDSCDFEKDNRIVVFSHPSAQSIADTMCSTYSSTMRRGGMRWDTFPDGWPNIRFETIDRLEGKDVVFIGSLQDKAHIFEQLSVTMVLPRQCINSLTIVFPYFPPGTFERVEQEGVLATAETMARIMTSSIPSTRSGIPRLLVYDIHALCERFYFTDNVQIRMMKAAPILIERLKSDGVKPVFVFPDDGAYKRFRYAFADAPQIVCSKMRVGDERHIKIVDRYNWSDVNLQNHTFVIVDDIAQSGTTLHECRVALKGTYGPSTRISAFVTHAVFPNDAHKRFTAGGDREGFDRFYVTDSVPEVAQRLLGLEPFVVLSIANDLGTTILRSVGRSVQPSPTKCITVGVCSESPIKLAAVDLAFRKAGVPMFKVVPIRNTKSGVPKQPVGIEETLQGALNRLDGVDVGRSGRSDISVLVSIENGIMADTTARSAARHGYRGYGQPKDRKREDGDGQRGDGDEQLGDEQLVLKPRGTLRDRLPEMTYEDHKLACEYYGWDTPETEEEYLRSFIGAEYLEKLNSDQSLSNYPKDVWVDCAVVALKMLHNPVSIQFSEPVSVPDEIVHQTNKDVTCGDIFKREFGYSNDNWHESVAGISRETLIADCLAPLATVVYAAMCAARHEVVE* # ORIGINAL: g2443.t1 original gene structure, not modified by PASA NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS gene 17818 19056 . - . ID=g2443;Name=g2443.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS mRNA 17818 19056 . - . ID=g2443.t1;Parent=g2443;Name=g2443.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 17818 19056 . - . ID=g2443.t1.exon1;Parent=g2443.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 17818 19056 . - 0 ID=cds.g2443.t1;Parent=g2443.t1 #PROT g2443.t1 g2443 MVRPYMEAGATIPSHIMAEILKERLDAPDCQAFGFVLDGYPPTMKDLDEFRKLSYEPLLIFCFECSDTTAIQRQCNRGERSTDTAALAKVRLETFNANPNFVKYGHAWFPRTPVVKIDAERHKDDVWETVNSTVSIWIDHARGNKTKNSSSFFPIEGTAQSTRFHFHVDAESTHDLMEVCGGVYAQHQSAQGQIKIYPIVALSLGVQTKQLDIYKKMMNFHTIENSESEAFVTGRLGSFAEDAKQLFNCTLAAAQVVGKPIMVELEEYIGEWTYTCSTGFEVQSLYDISDLNIDFDLDVEKYKHARLKHMPLELHLGFDLPKQDNNPPISVDWLNSECANRGMANGGWFIFGNESKWCYRSNEFSDGTEGPGAAFSIEHTQQKLFDQAASLSELVEVPIMLSLEIVHGIWQF* # ORIGINAL: g2441.t1 original gene structure, not modified by PASA NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS gene 12675 13581 . + . ID=g2441;Name=g2441.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS mRNA 12675 13581 . + . ID=g2441.t1;Parent=g2441;Name=g2441.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 12675 13202 . + . ID=g2441.t1.exon1;Parent=g2441.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 12675 13202 . + 0 ID=cds.g2441.t1;Parent=g2441.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 13549 13581 . + . ID=g2441.t1.exon2;Parent=g2441.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 13549 13581 . + 0 ID=cds.g2441.t1;Parent=g2441.t1 #PROT g2441.t1 g2441 MARDGVAGMVYLHSHNPPIIHYDLKSPNLLVDDKFSVKVCDFGMAKLKTSISSKRVGTLLWMAPEVYMKKQADEKLDVYSYGIILWEFAAMEAPYSEEPQKTLMKRICDENLRPSIPRCPRKYIQLMKRCWHSEPDQRPSFIDVMKSLDQFIDDEQRVIAGPLPTFLTPRPGATRMPPCTKNAKLM* # PASA_UPDATE: g2439.t1, single gene model update, valid-1, status:[pasa:asmbl_6462,status:3], valid-1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . gene 892 1749 . + . ID=g2439;Name=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . mRNA 892 1749 . + . ID=g2439.t1;Parent=g2439;Name=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . five_prime_UTR 892 1037 . + . ID=g2439.t1.utr5p1;Parent=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . exon 892 1058 . + . ID=g2439.t1.exon1;Parent=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . CDS 1038 1058 . + 0 ID=cds.g2439.t1;Parent=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . exon 1136 1749 . + . ID=g2439.t1.exon2;Parent=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . CDS 1136 1528 . + 0 ID=cds.g2439.t1;Parent=g2439.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant . three_prime_UTR 1529 1749 . + . ID=g2439.t1.utr3p1;Parent=g2439.t1 #PROT g2439.t1 g2439 MVVAPSKPLEVFGDASATIEAITSLSNTAARYVTHPGATERTAGGGPSPHDGASYWHPENVDVRQAGHNWKFELSTMLIRELHLMQETYNRNQQLDREFKERMQDREFKRDKQRFDTYAAIGVTFVISITILISRRL* # ORIGINAL: g2444.t1 original gene structure, not modified by PASA NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS gene 22684 23538 . - . ID=g2444;Name=g2444.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS mRNA 22684 23538 . - . ID=g2444.t1;Parent=g2444;Name=g2444.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 22684 23538 . - . ID=g2444.t1.exon1;Parent=g2444.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 22684 23538 . - 0 ID=cds.g2444.t1;Parent=g2444.t1 #PROT g2444.t1 g2444 MLGTVHSLDLAGCTGVTDVSSLGKVHNLNLTNCKSICDVSSLGTVHTLNLTGCDQVEDVKALSRVHKLTLGNLPKLVDVSGLANDTLVIANCPEVYDLSSVGSVRSLTLDACDSITNLTNLPQIRQWIIRSCDIKEYSSLSSAETVVLIQCPFMLDMQSLARIPNLAIVNHNTHIVVPAMHNSALWIKNVTMLYNTASFENVQSPRVNAYNVHDLSTSQIKYLKYIYRETKSILAQIKRSLKRSRSFLTVEQTTTEPTTTEPTTTEQQTAVLNNAEQLMINSLC* # ORIGINAL: g2442.t1 original gene structure, not modified by PASA NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS gene 16670 17196 . + . ID=g2442;Name=g2442.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS mRNA 16670 17196 . + . ID=g2442.t1;Parent=g2442;Name=g2442.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 16670 17025 . + . ID=g2442.t1.exon1;Parent=g2442.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 16670 17025 . + 0 ID=cds.g2442.t1;Parent=g2442.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS exon 17115 17196 . + . ID=g2442.t1.exon2;Parent=g2442.t1 NODE_372_length_25618_cov_22.8321_potentialcontaminant AUGUSTUS CDS 17115 17196 . + 1 ID=cds.g2442.t1;Parent=g2442.t1 #PROT g2442.t1 g2442 MDKVQSDPFDKFLDLFQDLKKEFCEMRAMIAEQKATIAEQKATIAEQKATIDEMKAEHKKTIDEMNVRIDEYHRENERLRADKDCMQLTIETLAKEVNELRYPQRQPPSDDEQRLIKNQLHAPSMTTTTIAPPIIPDAHNLLQIR* # ORIGINAL: g2370.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 10955 22172 . + . ID=g2370;Name=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 10955 22172 . + . ID=g2370.t1;Parent=g2370;Name=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 10955 12523 . + . ID=g2370.t1.exon1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 10955 12523 . + 0 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 12734 13169 . + . ID=g2370.t1.exon2;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 12734 13169 . + 0 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 13281 13418 . + . ID=g2370.t1.exon3;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 13281 13418 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 13619 13756 . + . ID=g2370.t1.exon4;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 13619 13756 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 14088 14154 . + . ID=g2370.t1.exon5;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 14088 14154 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 14321 14427 . + . ID=g2370.t1.exon6;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 14321 14427 . + 1 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 14570 14710 . + . ID=g2370.t1.exon7;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 14570 14710 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 14837 15097 . + . ID=g2370.t1.exon8;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 14837 15097 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 15206 15343 . + . ID=g2370.t1.exon9;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 15206 15343 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 15778 15921 . + . ID=g2370.t1.exon10;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 15778 15921 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 16134 16169 . + . ID=g2370.t1.exon11;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 16134 16169 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 16293 16430 . + . ID=g2370.t1.exon12;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 16293 16430 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 16913 17044 . + . ID=g2370.t1.exon13;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 16913 17044 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 17193 17448 . + . ID=g2370.t1.exon14;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 17193 17448 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 17718 17776 . + . ID=g2370.t1.exon15;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 17718 17776 . + 1 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 18141 18239 . + . ID=g2370.t1.exon16;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 18141 18239 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 18429 18929 . + . ID=g2370.t1.exon17;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 18429 18929 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 19148 19394 . + . ID=g2370.t1.exon18;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 19148 19394 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 19516 19723 . + . ID=g2370.t1.exon19;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 19516 19723 . + 1 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 20069 20169 . + . ID=g2370.t1.exon20;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 20069 20169 . + 0 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 20404 20474 . + . ID=g2370.t1.exon21;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 20404 20474 . + 1 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 20755 20811 . + . ID=g2370.t1.exon22;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 20755 20811 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 21110 21177 . + . ID=g2370.t1.exon23;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 21110 21177 . + 2 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 21710 21772 . + . ID=g2370.t1.exon24;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 21710 21772 . + 0 ID=cds.g2370.t1;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 22017 22172 . + . ID=g2370.t1.exon25;Parent=g2370.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 22017 22172 . + 0 ID=cds.g2370.t1;Parent=g2370.t1 #PROT g2370.t1 g2370 MQRGVPACQWPRALCVRALLLMAMSVGMSSAQQYNVTIWTVSGANGEGYTNGTLSLKLYGSSTTADPYTVASGITNRTVSLTLPSTAPYVGTLLRIGIVPNADSWQPERITVVYGNESYDFRFSSVDVLVDINASPKEVFVCAIPQAPDNGVFSCPSTYASSGASRNYCSLTCDPGYSPSSTTQAACSSATGFTGFTGYSNRFASCDPNCSPPISGGVSCAYINRQTCRKPNVCGPCLNSYGVRSDPIASTSDSNIECTDFITTYTIKLVMSYASVAGTDLPCTATLLGPNGKSDENTYLNPVSFLGNIQSLAVGSTYTRTISSKFFGFELLRGLRITCDYNSLGNTNWWLPSYIEIDSDNLGLPAPVRYNFLTTDRLDYGTWTLFAPPTDYPPRGSISCTSSMPGRACSVTCDSGYIPSTGVTLPTGTSSPFSTAGISRAVCYPDCSARSNSYCASLNRMPCSAVVNTCGPCMDGFDTASRTGSINGDTACVQFAKYDVKITTGQLTFKGPFYMTIYGDLGSTDEMLVTSNGFAASSTFTGTLNGQYIGTSFLTVQFRFVAPYDYWNDGYISLSYDTDDYWRFQAAPPLTPIKSDTIYTACNFPPNPLNGTFTCDSTLTIATGCSVTCNAPTYTATALASRVYTCRPDGSYRDSSLNKLNASLPFCQISNPCTVNGGGCGVNSVCTNPSPAVSKCACTTSSFYSPTADGKNCALINRCTSNNGGCGANSTCTYTGTGTRTCACVSSEFQSATNDGKNCTGYVSDLIEGRNCRLATTCDTNRGICGAFSTCAAGTDGKANCTCFAGYSSAFINNTNCAPTNNCLKNNGGCGLNTTSLCTLTGPGLNSCQCLDGFISPIGSQRDCRAITMCEKNSTYCGENTVCVNVDETSLRCDCMPGTISVSSTRCRLRTPCDTANICGQNSTCDAIDTTKYSCKCILDYISDFKNGSFCREPTGCDAVDPCGQYSQCKPNAANPRLAVCTCTPGYVSDTKDGLGCRETTPCDGDVNPCGSFSKCSSPPNDNTTFTCDCDAGYISDSGTAVKDCRLYLPNADQRSCRVKTDCDDQPCFPEGIATCNVSSTNISISTCSCRDGYVADQVARFCKVNDTCETKSFMCGSNADCAFDKTSFTANCVCRTGFRKTTAVDCEAIPPVDGGGGDSGTNTNTNTNTNTNTNTNTNTNTGTVGGSGSGGGSSVPLPMVGGAVGGVVVVAAVVGALIYRYRKKAANKSLPLWNDDAGRGIAIFENPVNVAKTRLASGKGAGVFEMTPFGKRLDGSISTEGLLDEVHDEAHERPYESLRHVTGTKESPYATLEEMRDNMAKGITTDTQKKENPYATIAGDAPETISPYASTKVRVDSESPYATVRKEDGGYAKIERPYASVVREGEEEGTDESGYAHVFRDPDVYRHAFETIVKHYASNARGDGVSLRDSQMPRDERAYEAIDQVLRKMNSEGIPEIPRDHVTVQDLLGAGNFGDVHRGVLLQDDDATKLQTVTASGVAMHVPQGPRTVALKTLKETAKLVERAAFIDEAILMARLKHPNVVSLLGAVVRGGELTIVLEFMENGSLLDYLKDKEETLKRSALIAMARDIAAGMVVLESAKLVHRDLAARNVLVNSNGSCKIGDFGLARTLENDYYITNGGHIAVRWTAPEAIHFRKFSSKSDVWSFGVVCWEIFSFGQRPFEELNGTEITKLIDDGGRLPMPEMASDRVYAMMLNCWNADPHERPTFLQLFAEYQGIVVSMRTKARSTVASAGDTEPYVQLVPEEAYTSYLQVIP* # ORIGINAL: g2373.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 34971 38049 . + . ID=g2373;Name=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 34971 38049 . + . ID=g2373.t1;Parent=g2373;Name=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 34971 34996 . + . ID=g2373.t1.exon1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 34971 34996 . + 0 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 35483 35554 . + . ID=g2373.t1.exon2;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 35483 35554 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 35885 35956 . + . ID=g2373.t1.exon3;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 35885 35956 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 36214 36285 . + . ID=g2373.t1.exon4;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 36214 36285 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 36378 36449 . + . ID=g2373.t1.exon5;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 36378 36449 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 36713 36784 . + . ID=g2373.t1.exon6;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 36713 36784 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 36876 36947 . + . ID=g2373.t1.exon7;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 36876 36947 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 37038 37109 . + . ID=g2373.t1.exon8;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 37038 37109 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 37361 37432 . + . ID=g2373.t1.exon9;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 37361 37432 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 37522 37593 . + . ID=g2373.t1.exon10;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 37522 37593 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 37980 38049 . + . ID=g2373.t1.exon11;Parent=g2373.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 37980 38049 . + 1 ID=cds.g2373.t1;Parent=g2373.t1 #PROT g2373.t1 g2373 MLAVAEAALDWSNQQLTSIASGLFDGLPGLQTLDLAYNQIATLPSGLFDKLTALTTLQLGENQIATLPSGIFDKNTALTTLRLYSNRIATLPSGIFDMLTVLRELDLSANQIATLPTGIFDKLTALTQLVLSSNQIATLPSGIFDKNTALTVLLLNSNQIATLPSGIFDKLTALTTLRLDSNQIATLPSWIFDKNTVLTELQVQSNQIATLPSGIFDKNTALTVLLDMLVDLHFRNLWIELCYVLRL* # ORIGINAL: g2371.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 24160 27163 . + . ID=g2371;Name=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 24160 27163 . + . ID=g2371.t1;Parent=g2371;Name=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 24160 24573 . + . ID=g2371.t1.exon1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 24160 24573 . + 0 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 24691 25027 . + . ID=g2371.t1.exon2;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 24691 25027 . + 0 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 25163 25303 . + . ID=g2371.t1.exon3;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 25163 25303 . + 2 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 25496 25710 . + . ID=g2371.t1.exon4;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 25496 25710 . + 2 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 26077 26120 . + . ID=g2371.t1.exon5;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 26077 26120 . + 0 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 26552 26685 . + . ID=g2371.t1.exon6;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 26552 26685 . + 1 ID=cds.g2371.t1;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 26802 27163 . + . ID=g2371.t1.exon7;Parent=g2371.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 26802 27163 . + 2 ID=cds.g2371.t1;Parent=g2371.t1 #PROT g2371.t1 g2371 MMAFTAMELATCSAFRRAPRSCSALLGIEGPNCNATCDRLPGEQMRGCGCSKSCMCENGAACNASTGECTCAFGWTGVVCNVIVAPSVPKVNATAEVSDYRVGIRLKWSHDDVGPRAWSNPGWRYEISRAGCFPKVYQVGDVLTFLDTDVVVNQGYTYFVKAYNSRNVFINESGTICLRRPSRPRLLITSRPLRGLIQTTKSMIKFTWKEDTSSGPIIKTLIFRSDGRLVLEGNIATEYKDRDVVFGKPTLAGGVVGAIVGAAGGGPSPHDGIAAGIVFAILFVRKRTSRKKMEALAHGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSAHSAFMAEIDLMRTIPNHPNIIELIGVCTQILRVEHLAKCEIVHRMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHAETRRQFSQLILQLRRGMAALFGTEGGGHGGGVDGANLTDGLSGRQSETYALTFPESAYAETLKPEEEGLHTLENVMFQKDGSSTGHSSA* # ORIGINAL: g2374.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 38939 40652 . + . ID=g2374;Name=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 38939 40652 . + . ID=g2374.t1;Parent=g2374;Name=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 38939 39214 . + . ID=g2374.t1.exon1;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 38939 39214 . + 0 ID=cds.g2374.t1;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 39302 39381 . + . ID=g2374.t1.exon2;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 39302 39381 . + 0 ID=cds.g2374.t1;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 39504 40105 . + . ID=g2374.t1.exon3;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 39504 40105 . + 1 ID=cds.g2374.t1;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 40220 40434 . + . ID=g2374.t1.exon4;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 40220 40434 . + 2 ID=cds.g2374.t1;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 40554 40652 . + . ID=g2374.t1.exon5;Parent=g2374.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 40554 40652 . + 0 ID=cds.g2374.t1;Parent=g2374.t1 #PROT g2374.t1 g2374 MYGYGCKTPCACENGACDPSTGMCTCHFGWIGVRCDVIIPPSVPKLNATAESSEYGVGVRLQWYHDDVGPRPWNNTWRYEITRTGCFPKVYQVGDVLTFLDTDVVVNQGYTYFVKAYNSKNESSEKAAVAAIQSLQKTARPSPPYDISSTPTLNPDNKQQSMIKFTWKEDISSGRIIKTFIFRDSRLVLEGLMTTEYKDFDVEFGKTYVYEIISANQYGNSTTTRFSETASVGPSDSGATAGSSSSNVAGPIAGGVVGAIVGAAGIVLAILFVRKRTSRKKMEAVARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKVSDFSSSDL # ORIGINAL: g2368.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 623 4410 . + . ID=g2368;Name=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 623 4410 . + . ID=g2368.t1;Parent=g2368;Name=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 623 658 . + . ID=g2368.t1.exon1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 623 658 . + 0 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 752 936 . + . ID=g2368.t1.exon2;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 752 936 . + 0 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 1268 1339 . + . ID=g2368.t1.exon3;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 1268 1339 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 1592 1663 . + . ID=g2368.t1.exon4;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 1592 1663 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 1920 1991 . + . ID=g2368.t1.exon5;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 1920 1991 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 2084 2155 . + . ID=g2368.t1.exon6;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 2084 2155 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 2460 2531 . + . ID=g2368.t1.exon7;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 2460 2531 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 2789 2860 . + . ID=g2368.t1.exon8;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 2789 2860 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 2955 3026 . + . ID=g2368.t1.exon9;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 2955 3026 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 3285 3356 . + . ID=g2368.t1.exon10;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 3285 3356 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 3615 3686 . + . ID=g2368.t1.exon11;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 3615 3686 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 3772 3843 . + . ID=g2368.t1.exon12;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 3772 3843 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 4341 4410 . + . ID=g2368.t1.exon13;Parent=g2368.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 4341 4410 . + 1 ID=cds.g2368.t1;Parent=g2368.t1 #PROT g2368.t1 g2368 MERNVGRPGGVSGNRRFVSVVGERAGRYNRRIALIVAVCILCQVEGVIGACPDTCTCNGGAVLSCAFPAGTTTFDLRVNQIATLPSGIFDKLTALTDLYLDSNQIATLPSGIFDKLTALTQFGLNSNQIVTLPSGIFDKLTALTDLVLSSNKIATLPSGIFDKLTALIGLRLEANQIATLPSGVFDKLTALAQLDLSANQIAVLPSGIFDQLTALTQLGLNSNQIAALPSGIFDKLTALTLLILHSNQIVTLPNGIFDKLTALTDLQLESNQIATLPSGIFDKLTALTILQLQSNLIATLPNGIFDKLTALTVLLDMLVNLHFRNVWIELCDVLRL* # ORIGINAL: g2372.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 30467 33934 . + . ID=g2372;Name=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 30467 33934 . + . ID=g2372.t1;Parent=g2372;Name=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 30467 30598 . + . ID=g2372.t1.exon1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 30467 30598 . + 0 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 30724 30928 . + . ID=g2372.t1.exon2;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 30724 30928 . + 0 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 31011 31420 . + . ID=g2372.t1.exon3;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 31011 31420 . + 2 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 31513 32197 . + . ID=g2372.t1.exon4;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 31513 32197 . + 0 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 32323 32537 . + . ID=g2372.t1.exon5;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 32323 32537 . + 2 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 32654 32768 . + . ID=g2372.t1.exon6;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 32654 32768 . + 0 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 32931 32979 . + . ID=g2372.t1.exon7;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 32931 32979 . + 2 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 33060 33248 . + . ID=g2372.t1.exon8;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 33060 33248 . + 1 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 33329 33462 . + . ID=g2372.t1.exon9;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 33329 33462 . + 1 ID=cds.g2372.t1;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 33564 33934 . + . ID=g2372.t1.exon10;Parent=g2372.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 33564 33934 . + 2 ID=cds.g2372.t1;Parent=g2372.t1 #PROT g2372.t1 g2372 MERHAIDSPEHAHARQGGPVQTVTFRARASDSGPTATPPATARMNGAACDRFTGACSCKAGWTGIACDQACAIGRYGTNCALTCACGDGGCNPFNGTCTCASGTGFFGSSCSMCACNKGVCNDGFRGDGSCNCTALLGFGGASCNASCDSLPGVPMYGYGCSTPCACGNGAACNSSTGECTCTFGWMGVVCNVIIPPSAPKVNATAEVSNYRVGIRLRWSHDDVGPRAWSNPGWRYEISRAGCFPKVYQVGDVLTFLDLDVVVNQGYTYFVKAYNSRNVSSTKAGQFAIESLEKAELPSPPYNVSSTPTLNPDNQKSMIKFTWKEDTSSGPIIKTLIFRDGRLVLEGYTATEYLDRDVIFGKMYIYEIISVNQYGNSTATRFSETASIGPSDAGTPTAGTSSSGDVAGPVAGGVVGAIVGAAGIVFAILFVRKRTSRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKVSDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSIENGWKLSAKAQVIVKVADMGLSRDTGASSDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHAETRPQFSQLVLQLRRGMAALCGTEGGGGHGGGVNLDGANPKDGMSDGQSEMYALTVPESAYAETLKPDEEGLHTLENVMFQKDGGSTGHSSA* # ORIGINAL: g2369.t1 original gene structure, not modified by PASA NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS gene 5340 8125 . + . ID=g2369;Name=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS mRNA 5340 8125 . + . ID=g2369.t1;Parent=g2369;Name=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 5340 5615 . + . ID=g2369.t1.exon1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 5340 5615 . + 0 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 5694 6378 . + . ID=g2369.t1.exon2;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 5694 6378 . + 0 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 6503 6717 . + . ID=g2369.t1.exon3;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 6503 6717 . + 2 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 6841 6955 . + . ID=g2369.t1.exon4;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 6841 6955 . + 0 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 7117 7165 . + . ID=g2369.t1.exon5;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 7117 7165 . + 2 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 7248 7436 . + . ID=g2369.t1.exon6;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 7248 7436 . + 1 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 7507 7640 . + . ID=g2369.t1.exon7;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 7507 7640 . + 1 ID=cds.g2369.t1;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS exon 7755 8125 . + . ID=g2369.t1.exon8;Parent=g2369.t1 NODE_98_length_40652_cov_19.6245_potentialcontaminant AUGUSTUS CDS 7755 8125 . + 2 ID=cds.g2369.t1;Parent=g2369.t1 #PROT g2369.t1 g2369 MYGYGCNKPCACENGATCNPSTGECTCAFGWTGVVCNLIVRPSAPKVNATVELSEYGIGIRLKWYHDDVGPRAWNSWRYEISRTGCFFKMYQVGDELTLLDTDVVINQGYTYYVRAYNSKNVSSEPSLPAGIENLQKTERPSPPYNVSSTPTLNPDNQQAMIKFTWKEDTSSGPIIKTFIYRDSRLVLEGPMDTEYKDRDVVFGKTYVYEIISVNHIGNSTATRFSEKASIGPSDSGGATTGTSSSGDVAGPVAGGVVGAIVGAAGIVFAILFVRKQNSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKVSDLTSMDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSIENGWKLSPKAQVIVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHAETRPQFSQLVLQLRRGMAALCGTDGGGRGGGVNLDGANSTDGLPGGQSETYALTVPESAYAETLKPEEEGHLHTLENVMFQKGGNSTGHSSA* # PASA_UPDATE: g898.t1, single gene model update, valid-1, status:[pasa:asmbl_2201,status:3], valid-1 NODE_1630_length_10124_cov_43.518 . gene 5910 8178 . + . ID=g898;Name=g898.t1 NODE_1630_length_10124_cov_43.518 . mRNA 5910 8178 . + . ID=g898.t1;Parent=g898;Name=g898.t1 NODE_1630_length_10124_cov_43.518 . five_prime_UTR 5910 6050 . + . ID=g898.t1.utr5p1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . exon 5910 6198 . + . ID=g898.t1.exon1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . CDS 6051 6198 . + 0 ID=cds.g898.t1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . exon 6300 6986 . + . ID=g898.t1.exon2;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . CDS 6300 6986 . + 2 ID=cds.g898.t1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . exon 7093 7429 . + . ID=g898.t1.exon3;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . CDS 7093 7429 . + 2 ID=cds.g898.t1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . exon 7559 8178 . + . ID=g898.t1.exon4;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . CDS 7559 7850 . + 1 ID=cds.g898.t1;Parent=g898.t1 NODE_1630_length_10124_cov_43.518 . three_prime_UTR 7851 8178 . + . ID=g898.t1.utr3p1;Parent=g898.t1 #PROT g898.t1 g898 MSRSILIIALAIAAVASVVAAASDPDIDRNCPQLIEARGYPVETHIVQTDDGYRLTTFRIPHGKDATLPRRGAIILAHGILDSSVTWVINGATDSLAFILADEGYDVWLMNARGNDYSLAHTKLTPDDHAFWDFTFDEQAKFDVPANVDYILASSGFNSLSYVGHSQGCTQMLAMLSFHRPDIAHKINWFVALAPVAHIGHTTSLLVRALADLHTEKIFQLLGVGKFLPGIDLLHKIVPGICTVTPWMCESVIWLVAGFDKKDLNQTRLPVYTSHFPSSTSVRNLVHWSQMVRSGMFQLYDFGSDKANEAVYGAGQTTPPNYPVERIGCGIAILGGGKDDLADLKDVQTLAAAVREDRIYTEVSPYAHLDFVWGMDASDGVYKQLLDILEKESPVKRIFQDGRMIELARVAPSNSNSNGGASVDNGQSESSGSNKALPIALGSAGALAVVAAVAGLAIYTRRRAQMAKEFPPLIASSESGEHAAASS* # ORIGINAL: g896.t1 original gene structure, not modified by PASA NODE_1630_length_10124_cov_43.518 AUGUSTUS gene 293 2538 . - . ID=g896;Name=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS mRNA 293 2538 . - . ID=g896.t1;Parent=g896;Name=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 2168 2538 . - . ID=g896.t1.exon1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 2168 2538 . - 0 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 1959 2049 . - . ID=g896.t1.exon2;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 1959 2049 . - 1 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 1754 1831 . - . ID=g896.t1.exon3;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 1754 1831 . - 0 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 1485 1536 . - . ID=g896.t1.exon4;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 1485 1536 . - 0 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 1088 1170 . - . ID=g896.t1.exon5;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 1088 1170 . - 2 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 620 772 . - . ID=g896.t1.exon6;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 620 772 . - 0 ID=cds.g896.t1;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 293 338 . - . ID=g896.t1.exon7;Parent=g896.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 293 338 . - 0 ID=cds.g896.t1;Parent=g896.t1 #PROT g896.t1 g896 MEALDAQSLADPLPACAIIPPLGGSFPNRSNRTARARATAAPTTDNIAARYNLRRRAGSAQKIPSAKRQRLASSAASNDTIGVAINACPTDAPVSTAIDAPSDAQNRPTAGCMRGIEITSVGIRDVPPIFHLGERLFSSKTLPNIFRMWDEYVVMEAFSSSPDLCFVAKTIADSANTKPEVVGFLLGYVINKEAHHIAYVEYLGVTVPYQRQGIATAMFNRFRTEAIEEYDATAVVADTQRNNFPSLCFMAKMGLNSPVDHVYLSLNLDTKADRGTGSSGYDSPSDRKGGR # ORIGINAL: g897.t1 original gene structure, not modified by PASA NODE_1630_length_10124_cov_43.518 AUGUSTUS gene 3141 4805 . + . ID=g897;Name=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS mRNA 3141 4805 . + . ID=g897.t1;Parent=g897;Name=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 3141 3276 . + . ID=g897.t1.exon1;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 3141 3276 . + 0 ID=cds.g897.t1;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 3463 3576 . + . ID=g897.t1.exon2;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 3463 3576 . + 2 ID=cds.g897.t1;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 3749 3835 . + . ID=g897.t1.exon3;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 3749 3835 . + 2 ID=cds.g897.t1;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 3936 4210 . + . ID=g897.t1.exon4;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 3936 4210 . + 2 ID=cds.g897.t1;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 4731 4805 . + . ID=g897.t1.exon5;Parent=g897.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 4731 4805 . + 0 ID=cds.g897.t1;Parent=g897.t1 #PROT g897.t1 g897 MGVPLGCTHIVLSLCVVSVGLLVCCVAPPVPVEKKVEAIRGVHPSAAWRYSQPSFLCLDGTRSFDPAVVNDDYCDCIDGSDEPGTAACPQFKFFCLNRGSRGVYIPSSHVDDGVCDCCDGSDEFLSGKQCPFACPNDGEDDDNDGAFLAREAAVKRVANGDAPAPAGVGVGVDADVGVNADPIGDAEARPGGGDGDGEDTEHHEVYWAMRTYGVTLHGSRLKPFNKGM* # ORIGINAL: g899.t1 original gene structure, not modified by PASA NODE_1630_length_10124_cov_43.518 AUGUSTUS gene 8418 9932 . + . ID=g899;Name=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS mRNA 8418 9932 . + . ID=g899.t1;Parent=g899;Name=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 8418 8933 . + . ID=g899.t1.exon1;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 8418 8933 . + 0 ID=cds.g899.t1;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 9060 9155 . + . ID=g899.t1.exon2;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 9060 9155 . + 0 ID=cds.g899.t1;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 9377 9772 . + . ID=g899.t1.exon3;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 9377 9772 . + 0 ID=cds.g899.t1;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS exon 9879 9932 . + . ID=g899.t1.exon4;Parent=g899.t1 NODE_1630_length_10124_cov_43.518 AUGUSTUS CDS 9879 9932 . + 0 ID=cds.g899.t1;Parent=g899.t1 #PROT g899.t1 g899 MTASSGDEDDYAGSRGSAQYRADAHLVTDVVSSTREAPMLPRHRSHHHATPRASLASRSTASLEDSSHTVVGDDGGFGVVGGERSADDIHALNDNAAANVDYEALLRKISWRVLPVPMLMNMLSFMDRANLSNAHGTITRDLYLSETEYGVSASIFFAAYISFEIPSNMMLERVELRKWMSAIMVAWGLVCTMTVFVKGFSGLMIARFCLGSAEAGLFPGLILYFSRWFTKAELSRRYAIFYSSQTMSNLLGGLLSYPILHMDGTLGLRGWQWLFIVEGLPTIVFGSVVWMLLPERPSSVTWLSVAEKGFWEQRIAAARSGVPSSAGSHSARASFALQQMREGKSLFLCFYQL* # ORIGINAL: g13482.t1 original gene structure, not modified by PASA NODE_3546_length_3237_cov_27.1037 AUGUSTUS gene 115 3165 . - . ID=g13482;Name=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS mRNA 115 3165 . - . ID=g13482.t1;Parent=g13482;Name=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 3031 3165 . - . ID=g13482.t1.exon1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 3031 3165 . - 0 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 1971 2858 . - . ID=g13482.t1.exon2;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 1971 2858 . - 0 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 1629 1781 . - . ID=g13482.t1.exon3;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 1629 1781 . - 0 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 1268 1311 . - . ID=g13482.t1.exon4;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 1268 1311 . - 0 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 862 1118 . - . ID=g13482.t1.exon5;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 862 1118 . - 1 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 467 572 . - . ID=g13482.t1.exon6;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 467 572 . - 2 ID=cds.g13482.t1;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS exon 115 228 . - . ID=g13482.t1.exon7;Parent=g13482.t1 NODE_3546_length_3237_cov_27.1037 AUGUSTUS CDS 115 228 . - 1 ID=cds.g13482.t1;Parent=g13482.t1 #PROT g13482.t1 g13482 MLPEVINAIERSPKPVIAAINGTAFGGGLEVALGCHYRIARSNVKVGLPEVELGILPGAGGTQRLPRLTGVEFAVDMIVGGKPVAAKKAMEAGIIDRLVADTDCVVAKAVEFAQTAGLKPRRTADLVVQGLRAAQDAAIERATNATSRLPKEMVAQRKCVEAVRASFASPSFDSGMRVEQDLIRWLMGQTQARAQQHLFFAERTCSKVPGLDGKVARDVKTAGIVGSGTMGTGIAISFAQAGIPVTVVDSNEDALKRSQTTVRKTFEDAVKKGRLDEKSALKLGSLVSTATDLKSLAGADLVIEAVFESMPVKKDVFGKLDAICKKDALLCTNTSTLSVDEIAASTSRPESVIGTHFFSPANIMKLLENVKGELSSDVAKATVMRLGQKLGKVAVLVGNCDGFVGNRMLHPYMEEAVFLLQEGALPAQIDRVMTSFGFPMGIFAVGDLSGNDIGWFIRKGKGLVDPATRPKGLRYCAIGDELCSEGRFGQKTGAGWYRYEKGNRMPLEDSAVTKLIEGYSQRLGIKRRAITDEEIVERCMYSLINEGFKVLEEGIAVRPSDIDIV # PASA_UPDATE: g11746.t1, single gene model update, valid-1, status:[pasa:asmbl_7694,status:3], valid-1 NODE_488_length_22688_cov_42.7519 . gene 12364 13210 . - . ID=g11746;Name=g11746.t1 NODE_488_length_22688_cov_42.7519 . mRNA 12364 13210 . - . ID=g11746.t1;Parent=g11746;Name=g11746.t1 NODE_488_length_22688_cov_42.7519 . five_prime_UTR 13019 13210 . - . ID=g11746.t1.utr5p1;Parent=g11746.t1 NODE_488_length_22688_cov_42.7519 . exon 12808 13210 . - . ID=g11746.t1.exon1;Parent=g11746.t1 NODE_488_length_22688_cov_42.7519 . CDS 12808 13018 . - 0 ID=cds.g11746.t1;Parent=g11746.t1 NODE_488_length_22688_cov_42.7519 . exon 12364 12627 . - . ID=g11746.t1.exon2;Parent=g11746.t1 NODE_488_length_22688_cov_42.7519 . CDS 12413 12627 . - 2 ID=cds.g11746.t1;Parent=g11746.t1 NODE_488_length_22688_cov_42.7519 . three_prime_UTR 12364 12412 . - . ID=g11746.t1.utr3p1;Parent=g11746.t1 #PROT g11746.t1 g11746 MNKTGDGPFVAFPFATFTFADNSTEYLKCPLSDRAKAFIQGSVPYGDDALIVEDGALVPFVAGHTYVVCTADSTSPDTKVHDVSETLATDPSSAASLYSSSFFSMATFPGFILASSTSALPRDASRQKPSSICREIIPNKK* # ORIGINAL: g11744.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 8185 8698 . - . ID=g11744;Name=g11744.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 8185 8698 . - . ID=g11744.t1;Parent=g11744;Name=g11744.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 8522 8698 . - . ID=g11744.t1.exon1;Parent=g11744.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 8522 8698 . - 0 ID=cds.g11744.t1;Parent=g11744.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 8185 8376 . - . ID=g11744.t1.exon2;Parent=g11744.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 8185 8376 . - 0 ID=cds.g11744.t1;Parent=g11744.t1 #PROT g11744.t1 g11744 MDAEVLLLGGDSPDAGRSAGVQVDAMEPSGENVSIPATKQVVDMDSHKNIGDDSVKDEAGILSTEAGSELQSETKIRTWLEAAEIVLREESPLHIKDMFQRIVDRNLVASQSRVSLETLMYK* # ORIGINAL: g11747.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 13718 16434 . + . ID=g11747;Name=g11747.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 13718 16434 . + . ID=g11747.t1;Parent=g11747;Name=g11747.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 13718 15911 . + . ID=g11747.t1.exon1;Parent=g11747.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 13718 15911 . + 0 ID=cds.g11747.t1;Parent=g11747.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 16019 16434 . + . ID=g11747.t1.exon2;Parent=g11747.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 16019 16434 . + 2 ID=cds.g11747.t1;Parent=g11747.t1 #PROT g11747.t1 g11747 MRCARVGDSTITESNSRTYQSAHHASPLEQHVSQRVGSARRTEASELEEERRSGWHSERRQTALTQTHPRLSQQSARRMSLIETDDSIAVLAGLHHNAASTFSSPESRRASVQSVIGRRISNLSLSSITAARDHRNASNLPPPASVLVDGQDGSLSYDRQSAQQKQWRRSGHAPRPMVGGHSIREQTNSDASAVSLGESTRNQCWHDGVEGRRTSAHSVVRNSEDLLAPVREGSPTLNEKKEGLTGDLSEDGVVGLGRLLSTKPTPRTSAARVSRESQRCSADDAEVASFGPVDAVGVDLVECSSERDRMHAVASGSSGEEASHRGDHEPISSSLHYINLMLLLLGLRSSGTRFGVGVAHVLSAVVLSLIVFRMVRIMCFLHYRWRTSLFVEVLDDVTWTMGHFGMIVFYLYLYSLFRRSNHIHHVIAMLDPRVGSMPHRDALIGTLRAQSVTAAILFALYFRLATLPYIANELKYGVPGTGPFDLMLRDALGVSYTILGLAMSNFFLCLSFSVILSVPFVVVAIFVWRIDVLLLTISTANEDIIVEDVDALEQAEREDEDSKFSGGGEDPTATDPVGTATDAQFPLLYEKSAVESEIVRTDSTAKMELPLNVPLASLSIDELLDVSEHAATPQQPQEQQEQQPQHQQQPQQQQQQQQRQQQQQKQQSQLHQRDDCYSVDVDDMLEERDSDLSISSVWKEVSVPVVANAATDAPHSVQQDTLPHNANNVHMEQADAADNLDGFAIELERFEAIDKHDPLDAVVGSLSGVARTVSYMDAGGERRGAEWDELLIVTLRRYSRVITALLCTCFIPWMTGMIVLKLYTYGEFGHMADLAVPVVYVMCFALVGALMYMFRRRRALLRRALAGRT* # ORIGINAL: g11740.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 232 1325 . - . ID=g11740;Name=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 232 1325 . - . ID=g11740.t1;Parent=g11740;Name=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 1228 1325 . - . ID=g11740.t1.exon1;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 1228 1325 . - 0 ID=cds.g11740.t1;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 926 981 . - . ID=g11740.t1.exon2;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 926 981 . - 1 ID=cds.g11740.t1;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 637 717 . - . ID=g11740.t1.exon3;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 637 717 . - 2 ID=cds.g11740.t1;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 232 350 . - . ID=g11740.t1.exon4;Parent=g11740.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 232 350 . - 2 ID=cds.g11740.t1;Parent=g11740.t1 #PROT g11740.t1 g11740 MSDKSDLSAAVQAGDLNKVRELLHKRRHLSILGSKKKASSKRKTTVLHHAAGKGHAEIVKSLLLADFSSNQQDEEGNTPLHWAARGGHMAVAKCLASSGCDIVRSNDDGKIAIDVALE # ORIGINAL: g11745.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 9290 12163 . + . ID=g11745;Name=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 9290 12163 . + . ID=g11745.t1;Parent=g11745;Name=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 9290 9359 . + . ID=g11745.t1.exon1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 9290 9359 . + 0 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 9583 9848 . + . ID=g11745.t1.exon2;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 9583 9848 . + 2 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 10365 10423 . + . ID=g11745.t1.exon3;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 10365 10423 . + 0 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 10706 10847 . + . ID=g11745.t1.exon4;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 10706 10847 . + 1 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 11013 11118 . + . ID=g11745.t1.exon5;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 11013 11118 . + 0 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 11527 11754 . + . ID=g11745.t1.exon6;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 11527 11754 . + 2 ID=cds.g11745.t1;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 12015 12163 . + . ID=g11745.t1.exon7;Parent=g11745.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 12015 12163 . + 2 ID=cds.g11745.t1;Parent=g11745.t1 #PROT g11745.t1 g11745 MAQKGRESPMIDIDGGIMDGGGQVVRNSVAFAALFGKSVHIFNIRTKDPNPSKRGLKAQHLTGVNLVSQLCNARISGAHIDSLEIEMHPDGLNGGVYTADTGTAGSTMLLMQIFGPIASRMGVNFEMNIKRRGYFPKGGGVVELTTQPVLHLEPIDLTERGNAVAVRGRAFVAGAVPGDQLRAMVTAATQALKRRFSGIPIEIDSVVEPPNAAVGSGSGIVLYVETSTGCRIGGSALGSKKTERNLSVVGVQAAEEVMSNWDHGGCVDEHMQDQLLIFMALAKGTSRVRTGPISTHSQVAIHFAQILSPAVFTVSDAPGSATSKIVTCVGCGWQNSQLS* # ORIGINAL: g11742.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 3477 4779 . + . ID=g11742;Name=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 3477 4779 . + . ID=g11742.t1;Parent=g11742;Name=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 3477 3709 . + . ID=g11742.t1.exon1;Parent=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 3477 3709 . + 0 ID=cds.g11742.t1;Parent=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 4033 4222 . + . ID=g11742.t1.exon2;Parent=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 4033 4222 . + 1 ID=cds.g11742.t1;Parent=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 4642 4779 . + . ID=g11742.t1.exon3;Parent=g11742.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 4642 4779 . + 0 ID=cds.g11742.t1;Parent=g11742.t1 #PROT g11742.t1 g11742 MARDLGVRTINVVRDRPNIDELVSDLKGLGATHVVTDAFLGTAEMKKLLADIAGDKKPMLALNMVGGKCATDMLRLLGQGGTMVTYGGMAKKPLTIPTGSLIFSDLNIRGFWMTRWNDRVGAHGTCERTDMLRDIGAAIKEGRLKQNLAGVPVESFADAFASAATQGTAKQVLLISAQTTTGAKSL* # ORIGINAL: g11741.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 2499 3279 . + . ID=g11741;Name=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 2499 3279 . + . ID=g11741.t1;Parent=g11741;Name=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 2499 2507 . + . ID=g11741.t1.exon1;Parent=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 2499 2507 . + 0 ID=cds.g11741.t1;Parent=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 2779 2917 . + . ID=g11741.t1.exon2;Parent=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 2779 2917 . + 0 ID=cds.g11741.t1;Parent=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 3035 3279 . + . ID=g11741.t1.exon3;Parent=g11741.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 3035 3279 . + 2 ID=cds.g11741.t1;Parent=g11741.t1 #PROT g11741.t1 g11741 MEKIEGVYPVQPPLPAVGGNEGVGVVTWVGSKVKELKEGDWVIPRKSGWGTWRTMAVATPRQLVRLPEGLPLLDAACIAVNPCTAYRMLRDFVTLSPGDIIVQNGANSGVGRFVSPVLRSLAFDSAKTWA* # ORIGINAL: g11748.t1 original gene structure, not modified by PASA NODE_488_length_22688_cov_42.7519 AUGUSTUS gene 16584 18256 . + . ID=g11748;Name=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS mRNA 16584 18256 . + . ID=g11748.t1;Parent=g11748;Name=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 16584 16676 . + . ID=g11748.t1.exon1;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 16584 16676 . + 0 ID=cds.g11748.t1;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 16982 17413 . + . ID=g11748.t1.exon2;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 16982 17413 . + 0 ID=cds.g11748.t1;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 17470 17823 . + . ID=g11748.t1.exon3;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 17470 17823 . + 0 ID=cds.g11748.t1;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS exon 18062 18256 . + . ID=g11748.t1.exon4;Parent=g11748.t1 NODE_488_length_22688_cov_42.7519 AUGUSTUS CDS 18062 18256 . + 0 ID=cds.g11748.t1;Parent=g11748.t1 #PROT g11748.t1 g11748 MDTSSVRGSASSSGCPDGTAIRITVTTAFFQMVPKISPYWWVRAMLGDKVTRPLIKYVVVVTSIYLPLEITFAWRAVAETLWWWILTYSPFVVLTMCCGHVLGHLLHNPRFGRIASMTILITSVILLTYDLIMFPLFLRSAGKQWRVVMVLIIHKTLAPLFLFITSWFSIYFTSAVLGRLFLSTVNNYTDLAVLVAINMAMETAARLVRPMNRYIFTLLRTRSLASARKALHDRDTDHPVEVLLIYTRMLVTYYGIAFATVFLIAGRLYYDNPLEGFTMFQSLTRIVVAGLLQFVGEYLGHLCACKFEVDYLERPAVILDKRVRSSSFKILALYSLLAVIYLSLRMCAIIRVGDTNV* # PASA_UPDATE: g11749.t1, single gene model update, valid-1, status:[pasa:asmbl_7691,status:12], valid-1 NODE_488_length_22688_cov_42.7519 . gene 18723 22562 . + . ID=g11749;Name=g11749.t1 NODE_488_length_22688_cov_42.7519 . mRNA 18723 22562 . + . ID=g11749.t1;Parent=g11749;Name=g11749.t1 NODE_488_length_22688_cov_42.7519 . five_prime_UTR 18723 19016 . + . ID=g11749.t1.utr5p1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 18723 19157 . + . ID=g11749.t1.exon1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 19017 19157 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 19328 20600 . + . ID=g11749.t1.exon2;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 19328 20600 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 20860 20960 . + . ID=g11749.t1.exon3;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 20860 20960 . + 2 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 21159 21272 . + . ID=g11749.t1.exon4;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 21159 21272 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 21604 21714 . + . ID=g11749.t1.exon5;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 21604 21714 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 21878 21936 . + . ID=g11749.t1.exon6;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 21878 21936 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 22102 22240 . + . ID=g11749.t1.exon7;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 22102 22240 . + 1 ID=cds.g11749.t1;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . exon 22434 22562 . + . ID=g11749.t1.exon8;Parent=g11749.t1 NODE_488_length_22688_cov_42.7519 . CDS 22434 22562 . + 0 ID=cds.g11749.t1;Parent=g11749.t1 #PROT g11749.t1 g11749 MAKSGPYNSADLPASKRPTDDLAKLEVLDDKTMLSSLDDRYAQDAIYTFIGDILIAINPFKDIDVYNVDFARWYVNAKKNFYPPHIYAVADAAYQQLVSGKGNQCVVISGMSGAGKTESTKHLLRHMIGLCRGHRTGLEWRVVQSNPLLEAFGNAKTVMNDNSSRFGRFVELKFRSADGALAGGTMCEYLLEKSRVVSHARGERSFHVFYYMLCGSSPEERKRLRLNSIGDYRYLMYPRGEPPMALDYAAGMYSELRECMKTVGLSKSEMDDIFSILSAILHLGNLEFVASPGCDDSTIAHQRQLDVVAELLGLDEAYLTDALTVRTTRTNNEKIRVPYSVAQSEDARDAMAKALYERVFSWIVCRVNELLSGGTTTLGNGNLAGSASADNFERMMLADKTLKGGHDDGAGDDGVGVIGILDIFGFENFERNSFEQLCINVANESLQHHFNSFVFDSEKKEYVMEGLHALAESVSFVSNYACVDMFLAKPIGLFALLDEESKFPKGTDVSLLEKINTNLEKNAHFEKSKKKGNNFTIAHYAGKVTYDTTGFLQKNRDNVPEAVTTVLRLSACELVNEMFKAQITKTGSLMRPKSSTDSGGTGLGPSSRKGYSIRKALGKSGGTHHVSGTTKQGKDPSSLTVAGKFKYSLGELMVKIVESTPHFVRCIKPNSTKRPGAFDHAFVHEQLR* # PASA_UPDATE: g11743.t1, single gene model update, valid-1, status:[pasa:asmbl_7692,status:12], valid-1 NODE_488_length_22688_cov_42.7519 . gene 5281 7790 . - . ID=g11743;Name=g11743.t1 NODE_488_length_22688_cov_42.7519 . mRNA 5281 7790 . - . ID=g11743.t1;Parent=g11743;Name=g11743.t1 NODE_488_length_22688_cov_42.7519 . exon 7504 7790 . - . ID=g11743.t1.exon1;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . CDS 7504 7790 . - 0 ID=cds.g11743.t1;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . exon 6828 7033 . - . ID=g11743.t1.exon2;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . CDS 6828 7033 . - 1 ID=cds.g11743.t1;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . exon 5281 6597 . - . ID=g11743.t1.exon3;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . CDS 5357 6597 . - 2 ID=cds.g11743.t1;Parent=g11743.t1 NODE_488_length_22688_cov_42.7519 . three_prime_UTR 5281 5356 . - . ID=g11743.t1.utr3p1;Parent=g11743.t1 #PROT g11743.t1 g11743 MFALSKVGDDVMDASGRQGDGLGGSSNTGGAARAKETNNDLLPKKKVSSTAEQQRMRRVCGGARRRIEEAIFVNSGLGDELKMVHDAIRVLEREKELLYQRVRQHDALFVLDDAFVAGDVRRPHAHAKSARAGGSGGSGIAAWPQSQLTSLPPAPAARRSGHDRRALPRVDSGTVGFDDYDNRVRINTHNGSNDIARVNYNNNNNNNNNLNGDNINGEEAIRPLAKRRRVSSKASSRRGDGAADLALSGASQRISPNPDAFSVPIMPVGGVPLLPLDDSDEEPLAKRVRRSKSGRDASAPTAPDAGGTLRGASVEGPTAASGERGVVRGASGEARGKRNTEGARDTFAIGNDVRGPATQGNESALPVAVVESPSVEKAQGRGSARGKRKRFSDAPSSQNNDADKRDPGEVTPDIDESRGNAKRVGRARRSSGRSSHLGDPTAAAVADAIDPPLVASVDSPTAPGKRVEAHAPVAAVQSPIEGDGSARSPRSRRSPARRLQPGVAKRGARRGKGKEDLGDGDAGDAGAEIVEGPAPVGDDVSGGPGGRRTASRAHAQPVVTAEADEPTDDEVLVIKAD* # PASA_UPDATE: g7594.t1, single gene model update, valid-1, status:[pasa:asmbl_6480,status:12], valid-1 NODE_3749_length_2835_cov_34.0475 . gene 1440 2835 . + . ID=g7594;Name=g7594.t1 NODE_3749_length_2835_cov_34.0475 . mRNA 1440 2835 . + . ID=g7594.t1;Parent=g7594;Name=g7594.t1 NODE_3749_length_2835_cov_34.0475 . five_prime_UTR 1440 1469 . + . ID=g7594.t1.utr5p1;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . exon 1440 1707 . + . ID=g7594.t1.exon1;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . CDS 1470 1707 . + 0 ID=cds.g7594.t1;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . exon 1791 1835 . + . ID=g7594.t1.exon2;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . CDS 1791 1835 . + 2 ID=cds.g7594.t1;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . exon 2571 2835 . + . ID=g7594.t1.exon3;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . CDS 2571 2659 . + 2 ID=cds.g7594.t1;Parent=g7594.t1 NODE_3749_length_2835_cov_34.0475 . three_prime_UTR 2660 2835 . + . ID=g7594.t1.utr3p1;Parent=g7594.t1 #PROT g7594.t1 g7594 MSSSQLLLGEDPQKRTVDEVHTWALGVLVNPPAASSGGIAEMTRRVASKCIDGPTLYGLLDHEWGIFSTMQSLSVRLRTEFKTLSGTDHLTTVPGVNMENNRAATVDYGAVDSIAQGESQKHA* # ORIGINAL: g5160.t1 original gene structure, not modified by PASA NODE_1194_length_13219_cov_40.3039 AUGUSTUS gene 10677 12974 . - . ID=g5160;Name=g5160.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS mRNA 10677 12974 . - . ID=g5160.t1;Parent=g5160;Name=g5160.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS exon 11354 12974 . - . ID=g5160.t1.exon1;Parent=g5160.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS CDS 11354 12974 . - 0 ID=cds.g5160.t1;Parent=g5160.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS exon 10677 11023 . - . ID=g5160.t1.exon2;Parent=g5160.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS CDS 10677 11023 . - 2 ID=cds.g5160.t1;Parent=g5160.t1 #PROT g5160.t1 g5160 MFDFVHAAWDYFTSDVLVLIPVWAIVLGLLWVGIVFTYRHPMLSLFVMYYIASAASTGRMRKYSKDRRSRLHVHVVRPKYLDNTSRAELFVLTNDLVDVNIDPSQQSKAADMFEKYLDSFEFAIIFRDIVDGSLRGMLLLSRNKYEFKNRPPVTVIQGGLALFKEEYRGSSISVFIMGYFFVLEFLRHPFSHFYLSYKSYSFKSYINAVTTFEEVWPRYDRKIPALEKSMIDEMGTRIVHDGETYNPTTCVVNREDSALKEDAAPITDEELKNPHIHFFNETNPGWHRGHLMVILCKVRAKDVYNLMARAFRRATGMGGAGKIRRTTGKVVSAHEDFATQRKRKSEDAVRALSTDASPSASNTAPAAAAAAAAAAAQTTKASGVDDEPKRAPTAPVPRASTQEEIVATLVVPKRRSRPRAMTLSAALMNRTLAVGDLMTGESLYVSTESVPIELDESDNLVPVGAGNTGNSLLSVPEKVHGGSASGSASPGSANRSPSTRRQRTISHGQTKNKGPVDIGLPASFVSHLQKIADKAEASRQKAREEGVATPEMTFSPYAQRKRLGSLRGDPSSLPNNPGGSASPPTSLARGRAGVRRSVTYSGSDAIVSAIAQKGDTVIVEEVEGATISKFTAHVRRKSMLAPQIPVVQDISDDDL* # ORIGINAL: g5159.t1 original gene structure, not modified by PASA NODE_1194_length_13219_cov_40.3039 AUGUSTUS gene 9563 10326 . + . ID=g5159;Name=g5159.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS mRNA 9563 10326 . + . ID=g5159.t1;Parent=g5159;Name=g5159.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS exon 9563 9885 . + . ID=g5159.t1.exon1;Parent=g5159.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS CDS 9563 9885 . + 0 ID=cds.g5159.t1;Parent=g5159.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS exon 10023 10326 . + . ID=g5159.t1.exon2;Parent=g5159.t1 NODE_1194_length_13219_cov_40.3039 AUGUSTUS CDS 10023 10326 . + 1 ID=cds.g5159.t1;Parent=g5159.t1 #PROT g5159.t1 g5159 MSLIRLFGNNMLRDPFFERTLETLWPEETTRGQKGDVEKNVWQPRCDVSESAKDIKICASLPGVKKEDINLEIDEDGKFMTITGKTERKEEKDEKDKEGRQYHYVERMCGDFRRSFQLPHNVDTKSINAHYEDGVLDVTIPKKEQEAKTKRIEIGCGQKMSTGIEGNMSSKHTGTQNKHAGQATPQGQVHMGKAGSVQQQRASQPMEQ* # PASA_UPDATE: g5158.t1, single gene model update, valid-1, status:[pasa:asmbl_729,status:12], valid-1 NODE_1194_length_13219_cov_40.3039 . gene 803 8273 . + . ID=g5158;Name=g5158.t1 NODE_1194_length_13219_cov_40.3039 . mRNA 803 8273 . + . ID=g5158.t1;Parent=g5158;Name=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 803 874 . + . ID=g5158.t1.exon1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 803 874 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 1168 1365 . + . ID=g5158.t1.exon2;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 1168 1365 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 1724 1777 . + . ID=g5158.t1.exon3;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 1724 1777 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 2073 2156 . + . ID=g5158.t1.exon4;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 2073 2156 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 2405 2507 . + . ID=g5158.t1.exon5;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 2405 2507 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 2811 3292 . + . ID=g5158.t1.exon6;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 2811 3292 . + 2 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 3474 3557 . + . ID=g5158.t1.exon7;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 3474 3557 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 3801 3884 . + . ID=g5158.t1.exon8;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 3801 3884 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 4194 4323 . + . ID=g5158.t1.exon9;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 4194 4323 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 4567 5206 . + . ID=g5158.t1.exon10;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 4567 5206 . + 2 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 5517 6243 . + . ID=g5158.t1.exon11;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 5517 6243 . + 1 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 6424 7151 . + . ID=g5158.t1.exon12;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 6424 7151 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 7584 7638 . + . ID=g5158.t1.exon13;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 7584 7638 . + 1 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 7770 8009 . + . ID=g5158.t1.exon14;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 7770 8009 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . exon 8164 8273 . + . ID=g5158.t1.exon15;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . CDS 8164 8208 . + 0 ID=cds.g5158.t1;Parent=g5158.t1 NODE_1194_length_13219_cov_40.3039 . three_prime_UTR 8209 8273 . + . ID=g5158.t1.utr3p1;Parent=g5158.t1 #PROT g5158.t1 g5158 MQPRSRLSSLLGRKSSEPTPPSFESSPLSKSSTVRSPKTNRRGVMSRIFSSPGSERDALQDNDRLRKASAPPQLASDLPKDVGGDAQLLNSLSRNASQTFLLHGLLDQSIAQVEARLFTLTARYDSMYNPPEDLEKEIFDARDMLKKLQKRKQEAEKDSHSVAVMAAAAEVPTVDASAFPAPPPVSLDLVDMDDDDADAEAEAFRAPTKTFDGVTAGTATVIETATTSSAATATTSSGDAPGSVSVNNASPLVASPGASPNGSPRSQRSKEDKRQREMAKLAAALAQSGLVSNDASWVPHRNERRHNTIMVVEDDTKPARARPPASLSRSTSSSTILLAKQMRSPDAIRTIRGDAAIQASLDLERSRLETLKARFESLYDPPEQLEEEMKQCENMVAWLQRKLHGSNDASPVLERTSAELRTTISVASLAPIPSLAGERPSLSPVSLSNAGATSSAETTSPHGSTPVRAGLCSACRTAPPKNVMPWELAKSNHLDCLMCLIDRRMAGVDDKDNSMRTAMHWAAEKGRVEIMRFLLSKHAKMNQDVFGWTPLDLAAMHGQVECLSMLLMMEPAPTETTDGQGNSALLWAAGRGHEECVLKLLDARWNLDTANRDGNTSVLMATEKGHLKITSLLLSLGAKLDVTSTKLSRALMDATKAGELNLVERFLKAGLRTNARDAAGTASRNGRLDIVCVFLEHGVEPNLKAMNEAADAAVAADNLSALIALSEHGVTVQSHTREPPLTCVAAIHGSVECLRWLLQKDLALADVLGKDRATPLILAARAGQLEALRLLIQFHCDVYKTDDTGDTAYETAVKAGHEECAELIRASHRDKKSVGAWTIADVRDWLLKAPELEFPQQFKRLEYAGKFFAEQVDGSTLLTLGDKELKEELGLELGTRRAILQAIDNLRKRPSIMQVQAALVLRSGAPDHNWEVLREKIRLSASELGHGEFGTVYQGEVMLADGTRAVAAVKTLRDDHTDKDREEFLAEADIMKAFEHANVLRLLATCTVDGMTPYILLEFMALGDLKSFLVRQRPGSAERDADYALDTDQLVSMARDISDGMEYLSARGFVHRDLAARNMMCTPKVTGELCEHAWSKALVTVKIADFGMSRRIGEKDYYKKSTVTKMPVKWMAIESLLDRKWTIASDVWSFGVVLWEIFSFGASPYPGVQAHEVAKLLQSGHRMPPPGGTPPGIASAMEGCWQTDVKLRPTFATLHRIMHDALVEIDEDSPYILLGGTETDA* # PASA_UPDATE: g12777.t1, single gene model update, valid-1, status:[pasa:asmbl_2877,status:12],[pasa:asmbl_2878,status:12],[pasa:asmbl_2879,status:12], valid-1 NODE_1877_length_8757_cov_47.2876 . gene 3197 7699 . + . ID=g12777;Name=g12777.t1 NODE_1877_length_8757_cov_47.2876 . mRNA 3197 7699 . + . ID=g12777.t1;Parent=g12777;Name=g12777.t1 NODE_1877_length_8757_cov_47.2876 . five_prime_UTR 3197 3545 . + . ID=g12777.t1.utr5p1;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . five_prime_UTR 3689 3874 . + . ID=g12777.t1.utr5p2;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . exon 3197 3545 . + . ID=g12777.t1.exon1;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . exon 3689 4063 . + . ID=g12777.t1.exon2;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . CDS 3875 4063 . + 0 ID=cds.g12777.t1;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . exon 4385 4487 . + . ID=g12777.t1.exon3;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . CDS 4385 4487 . + 0 ID=cds.g12777.t1;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . exon 4932 7699 . + . ID=g12777.t1.exon4;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . CDS 4932 7120 . + 2 ID=cds.g12777.t1;Parent=g12777.t1 NODE_1877_length_8757_cov_47.2876 . three_prime_UTR 7121 7699 . + . ID=g12777.t1.utr3p1;Parent=g12777.t1 #PROT g12777.t1 g12777 MEVTGGGLMAPTADVARVAAAVLHPPVASEGGGIAEVAHWLRALGLQQYVDGFKTEGFDSMLAIRELNEEDLLEIGVKRGHRRIMLRALEQPYSPSNGDNGTAHTPHALTQSQNGGQSAPEDQMGTSQGSRDELTDDSLGRARIPSVDLQRERADVRRFSGRFKLNDRRLQPSVEVQRERADVRRFSGHFRLNDYVQSVPGRTSTIPSGGESRDSQPLSLSHSSQQSPVSHIQQQQHQQQQQQQQQQIPLYGPFPTNATPSGTNVESHMAVQMGLVPTATAMPAHHHHHHHHHAPAALHKGGMAPGFHVAYPGTTHRSGGGGGGGMPPNSHAPSHLGNIHAHPQQAHQQLQHQQPQLHQQQQQQQQQQQQQQQQQRHNLSAQQHPPPPSHHHQSSTMHSAVPATAAPDAPMRRSSLNHSGKSGDLKFFQHKPVLNTSAAAGGERGVNGRRVSKVLLRREVMDFSQEGNNNNNSNHRRQSSDSQPLSMSDGSLSMSMSMSGSSGRTPLGGSKGRQGDDQLADSGSSGDSGLSGNRPVSNRPGNGRVVEGMAASSDSGGDDALRQSKERARDPPLAPMGVDGHYQAPSQQTMQQHRASLQPLGSSGHGADIPRSPRGRSSCTFVMVSADSASGRAKKERRFTMHEVHFSTQGQSGQVSGEVGMQSPLAGAVAFLASGPGANRRDSAQQYQFVPFVRRGSESLLPHEKAQSQAQAPPTPPPSVPHAQQPPEEQQQQQQQQQALPHEAASDRSQSTANTANVTIDTLKTNEANSVSSNGDSRDGSGRSGGTGKSRKRKLLETAAGDGDASNGNDSEGGVDSVARGKRAAR* # PASA_UPDATE: g12776.t1, single gene model update, valid-1, status:[pasa:asmbl_2880,status:12], valid-1 NODE_1877_length_8757_cov_47.2876 . gene 709 2138 . - . ID=g12776;Name=g12776.t1 NODE_1877_length_8757_cov_47.2876 . mRNA 709 2138 . - . ID=g12776.t1;Parent=g12776;Name=g12776.t1 NODE_1877_length_8757_cov_47.2876 . exon 2088 2138 . - . ID=g12776.t1.exon1;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . CDS 2088 2138 . - 0 ID=cds.g12776.t1;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . exon 1832 1865 . - . ID=g12776.t1.exon2;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . CDS 1832 1865 . - 0 ID=cds.g12776.t1;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . exon 1307 1446 . - . ID=g12776.t1.exon3;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . CDS 1307 1446 . - 2 ID=cds.g12776.t1;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . exon 709 1036 . - . ID=g12776.t1.exon4;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . CDS 995 1036 . - 0 ID=cds.g12776.t1;Parent=g12776.t1 NODE_1877_length_8757_cov_47.2876 . three_prime_UTR 709 994 . - . ID=g12776.t1.utr3p1;Parent=g12776.t1 #PROT g12776.t1 g12776 MSNNVAAVLHGVKDLRMDTIPVPTPGPYGSDDGRIHVWNTDTGHPATILTGHDQPVGHVAWNSKYTMMASASSALSFWIPTIADSGSN* # PASA_UPDATE: g5227.t1, single gene model update, valid-1, status:[pasa:asmbl_2113,status:12], valid-1 NODE_1600_length_10248_cov_40.4626 . gene 127 6464 . + . ID=g5227;Name=g5227.t1 NODE_1600_length_10248_cov_40.4626 . mRNA 127 6464 . + . ID=g5227.t1;Parent=g5227;Name=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 127 399 . + . ID=g5227.t1.exon1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 127 399 . + 0 ID=cds.g5227.t1;Parent=g5227.t1;5_prime_partial=true NODE_1600_length_10248_cov_40.4626 . exon 647 985 . + . ID=g5227.t1.exon2;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 647 985 . + 0 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 1257 1327 . + . ID=g5227.t1.exon3;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 1257 1327 . + 0 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 1649 1849 . + . ID=g5227.t1.exon4;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 1649 1849 . + 1 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 2184 2232 . + . ID=g5227.t1.exon5;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 2184 2232 . + 1 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 2490 2540 . + . ID=g5227.t1.exon6;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 2490 2540 . + 0 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 2717 2850 . + . ID=g5227.t1.exon7;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 2717 2850 . + 0 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 3194 3380 . + . ID=g5227.t1.exon8;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 3194 3380 . + 1 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 3564 3748 . + . ID=g5227.t1.exon9;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 3564 3748 . + 0 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 3987 5426 . + . ID=g5227.t1.exon10;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 3987 5426 . + 1 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . exon 5616 6464 . + . ID=g5227.t1.exon11;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . CDS 5616 6198 . + 1 ID=cds.g5227.t1;Parent=g5227.t1 NODE_1600_length_10248_cov_40.4626 . three_prime_UTR 6199 6464 . + . ID=g5227.t1.utr3p1;Parent=g5227.t1 #PROT g5227.t1 g5227 QRSGGSTSPPVHGSGSIVPESIPAGAGVNPADIKCTPSSSVDETPRKGSELPPATRKDISNVMAIDRRTSVASSSGSLKAARVSNFEAKFAAAGHLAPPDSRLGHTHRKAYHRSSTMSGHHSTIESDSDDNDDDPSDTCEASGAPETRTSLEMDSGFFQVKFIGCLMPLFRRYKGLRDWYYNNFSNLTEQSEKIIRLFFFAMYLLDWAWVGSYMAEQWNIYGLNSDDWYYVNRNTVHWTILVFFSFFMVIESIVRIAYAGRDVTRVTALIPVILIDLLTVWPFIVSLFWVKLRSIYIPSYLRVWHAHMVLRVFVLGNSVKQRIDVRMQLTFLVHMLCCLMVTGMCGFRYFSNDFYPASSPPNSFLDSFYFMVVTMSTVGYGDIVAENQWARVFVICLIIVSLIIIPESIARLAQILQESSQYSGSYKQASNEKHVVVYGRITYEGMKEFFNEFYRYEDPSNKTRELVVMMSTTEPSRELRAFLLRPYISKRAIFLEGSALVDKDLHRADVSRASAVFLLADTSNEDADVNKNHDVVDIDRSNILRSWAIRMYSTEVPLYVNLLRAENRYHIEKMFHCDRINCSEEMKMNFLALNCIAKGASTLITNLVREQSMYLNKALEGRNRALWVDEYISGTATNIRPMIAGGFLVGMTFSDAAALIHLRFDITLMAVRLRGRRQRILLNPSVNYRIRGGEELFVCSRSDRELDDLRLFIRTDDAMQIRQEIEEEMANSFNDRHTRRVAGIAGSFADLLPLGKLSETLGEQRHSETVPPNYVRAREEAGAALARRHTSPAHLGEGNAADGTKARDSPTSLVREQHDCDDHHLSPGGRALHSQHVRKFGSLADRHGGSTVTPTYRVDYPPAPYPGARLFPCYLTQSPRSFDESTLVNAEHLRGHVIVCSEKFDTIFQLVARLRAADLAASKVRPIVLLGERPPPPHTWTAVSWFPEVYYVDGSGVNVEDLVRAGGKSADRMIVISFSSTLASNTDADSDKPMLDSRAIMITHMIGFINDDRETDLATTTELLFPENMKFLAITSSGIEKRRIPYFLQPSYAAGRGWTARMIDSVSYAAHHEPFLYEIMLSLVGSRERLGGSSVLMQVRLPPALRGEKFSTVFHHFAVNYGIIVLGLYRSPSEPLGNVLPFVYTNPPSDTIVHPADLIFVLQRTERSEA* # ORIGINAL: g5228.t1 original gene structure, not modified by PASA NODE_1600_length_10248_cov_40.4626 AUGUSTUS gene 6853 9411 . + . ID=g5228;Name=g5228.t1 NODE_1600_length_10248_cov_40.4626 AUGUSTUS mRNA 6853 9411 . + . ID=g5228.t1;Parent=g5228;Name=g5228.t1 NODE_1600_length_10248_cov_40.4626 AUGUSTUS exon 6853 9411 . + . ID=g5228.t1.exon1;Parent=g5228.t1 NODE_1600_length_10248_cov_40.4626 AUGUSTUS CDS 6853 9411 . + 0 ID=cds.g5228.t1;Parent=g5228.t1 #PROT g5228.t1 g5228 MAHRGRGRRFLPTVDALTLERDAADASAMTRSTSDTVSPASDNTKARAPRTKRLSPQQRQPHPDAPAHSADSTHTDERTMSVPTGGDAVASLQGQDRQLLRQQRPRPHRELATRTDAREAAPVGAVGGDGGRAVSDAPRLSQPAKFPCKQCSRQFDKKSGLVQHCRDSHPRPSVAAPPSAHVAASANHSVSGSTHGSEGAHFDGHTMQLPLIASGAGEGKSVTSSRALGASPTNNTAAHVSVSAHSGGEVLCEHCGKGFNTRGKMLAHCASLAGKKGHPNQRMEGGAGSSGTAGAQQQQQQQQQQQQQLSQDQSSDTRAPSSKDTKAAGRHVDAAVSATSQAGLSFLVVDGTTEVNGTNINNSNSNNNNSRISKRTRSQRDEPQPKVLLKRVEKLNEVGKKVGGGDGDDDGDRSDRIAGRIEDAKKADDERIVREAAAALEALNLGHAMERLSRMVMEHYRNTHLADSKLRARWDIAAEMKEIVRRIGPDFAAADVCIFGSSGNGFGTISCDLDLCLCNVGPASVSQNSRAARQGDAESDRADRSVRKGTMESAAAPIKSAAAEDGANADADDADDADDADGAIEREGDDDEESAETRDAERVNRGLAQKLLADVHRELKRRRWGRMRFIKTAKVPIIQFVHPRTRLDCDLSLGNDNAIANTHICRLCSSLDERIPAVVLAVKRWTSHLNINGAAYGWLSSFSYTLMALHFLQRVQPPLVPPTEILSAANIQQYRLAAALNTASAGDLLRGFFKFYGGGAFNFVEDAVCVRLGRRTAKSELHNLQHVRGNLWRIAIEDPANERLNPGAKIASGQRQRELIARLAEAADVCREERFLRLLDVAPSGYDRQRPW* # PASA_UPDATE: g7559.t1, single gene model update, valid-1, status:[pasa:asmbl_1944,status:3], valid-1 NODE_1552_length_10521_cov_42.0633 . gene 8259 9886 . - . ID=g7559;Name=g7559.t1 NODE_1552_length_10521_cov_42.0633 . mRNA 8259 9886 . - . ID=g7559.t1;Parent=g7559;Name=g7559.t1 NODE_1552_length_10521_cov_42.0633 . five_prime_UTR 9811 9886 . - . ID=g7559.t1.utr5p1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . exon 9660 9886 . - . ID=g7559.t1.exon1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . CDS 9660 9810 . - 0 ID=cds.g7559.t1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . exon 9384 9518 . - . ID=g7559.t1.exon2;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . CDS 9384 9518 . - 2 ID=cds.g7559.t1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . exon 8986 9215 . - . ID=g7559.t1.exon3;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . CDS 8986 9215 . - 2 ID=cds.g7559.t1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . exon 8259 8821 . - . ID=g7559.t1.exon4;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . CDS 8405 8821 . - 0 ID=cds.g7559.t1;Parent=g7559.t1 NODE_1552_length_10521_cov_42.0633 . three_prime_UTR 8259 8404 . - . ID=g7559.t1.utr3p1;Parent=g7559.t1 #PROT g7559.t1 g7559 MGGFTGPLIFGLVLCAAGVMTALPFLVRYVFTHCGANVLAAVTGMKLGLPGLFFKSRAGSIPLWSMLLWWPWLMLIYLRMRRFWGKHADLEGASLVGDGLYLGSYPTDESCIVSITDKGERVDVAVVDVTCELPRRAFRGGRYLNIPSWDGMAPTVDQIDAAVLFVKDMRSQGRPVLVHCAFGIGRSSTVMCAVLTAMGMCPNWEAAYAYLSSKRRVVRLNARYKHALREWSKANGLPPGAPRSPQPARSTESSPLIQTTIPYGDGSSANPVPSHVAKHLSAGRNASGGSLLSAPIGLGLERRTPHALSH* # PASA_UPDATE: g7556.t1, single gene model update, valid-1, status:[pasa:asmbl_1943,status:12], valid-1 NODE_1552_length_10521_cov_42.0633 . gene 174 1903 . - . ID=g7556;Name=g7556.t1 NODE_1552_length_10521_cov_42.0633 . mRNA 174 1903 . - . ID=g7556.t1;Parent=g7556;Name=g7556.t1 NODE_1552_length_10521_cov_42.0633 . five_prime_UTR 1811 1903 . - . ID=g7556.t1.utr5p1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . exon 1661 1903 . - . ID=g7556.t1.exon1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . CDS 1661 1810 . - 0 ID=cds.g7556.t1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . exon 1250 1398 . - . ID=g7556.t1.exon2;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . CDS 1250 1398 . - 0 ID=cds.g7556.t1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . exon 1006 1102 . - . ID=g7556.t1.exon3;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . CDS 1006 1102 . - 1 ID=cds.g7556.t1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . exon 591 893 . - . ID=g7556.t1.exon4;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . CDS 591 893 . - 0 ID=cds.g7556.t1;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . exon 174 278 . - . ID=g7556.t1.exon5;Parent=g7556.t1 NODE_1552_length_10521_cov_42.0633 . CDS 174 278 . - 0 ID=cds.g7556.t1;Parent=g7556.t1;3_prime_partial=true #PROT g7556.t1 g7556 MTVDSGSAVAFTAIPIIDVSPFTTPEGYATPAELDAAKRRIAAELHTACKDVGFFYVKGHNVPHELVTGSQHLAREFFSLPTEEKQKIAITNSKQRPACRGYQRLGQNVTQYQKDWHEAIDCYKHFDENAPEVVANKPLHGPNQWPENPPAFRDTFERYVESMKALGSAIMRAMALGLGLDENFFVRDFIGDSFWVMRIIGYPPLSEGRASDSGVGVSCGEHTDYGCLTIINQDSTKGALQVKNTAGQWISADPIPGCFVMNIGDMVR # ORIGINAL: g7558.t1 original gene structure, not modified by PASA NODE_1552_length_10521_cov_42.0633 AUGUSTUS gene 6073 8135 . + . ID=g7558;Name=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS mRNA 6073 8135 . + . ID=g7558.t1;Parent=g7558;Name=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS exon 6073 6234 . + . ID=g7558.t1.exon1;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS CDS 6073 6234 . + 0 ID=cds.g7558.t1;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS exon 6408 6712 . + . ID=g7558.t1.exon2;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS CDS 6408 6712 . + 0 ID=cds.g7558.t1;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS exon 7229 7397 . + . ID=g7558.t1.exon3;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS CDS 7229 7397 . + 1 ID=cds.g7558.t1;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS exon 7568 7672 . + . ID=g7558.t1.exon4;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS CDS 7568 7672 . + 0 ID=cds.g7558.t1;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS exon 8076 8135 . + . ID=g7558.t1.exon5;Parent=g7558.t1 NODE_1552_length_10521_cov_42.0633 AUGUSTUS CDS 8076 8135 . + 0 ID=cds.g7558.t1;Parent=g7558.t1 #PROT g7558.t1 g7558 MKLLVFRSLWGTEVFSGNIGDTIAEIKRLGYDGIEASLGDVAKIGKDTFVKLLKQHDLKHICGIYTSFQDYEGEWEDLPVSTHVTRFREQLAEAVSHSPFGINAHSGTDSWTREECEEYFAQATAIEREFGVAVGHETHRSRALFNPWIAAHLVKKFDGLKLTADYSHWVVVAERLLTHPRDVELFSALADRVLHVHARVGQPQHAQVDDPELPYNAPYVDAHYRWWQLVWEAQRKKGAKYSTATPEERLRLLSRFEQWKSGGNVQ* # PASA_UPDATE: g7557.t1, single gene model update, valid-1, status:[pasa:asmbl_1945,status:12], valid-1 NODE_1552_length_10521_cov_42.0633 . gene 3637 5265 . + . ID=g7557;Name=g7557.t1 NODE_1552_length_10521_cov_42.0633 . mRNA 3637 5265 . + . ID=g7557.t1;Parent=g7557;Name=g7557.t1 NODE_1552_length_10521_cov_42.0633 . five_prime_UTR 3637 3669 . + . ID=g7557.t1.utr5p1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . exon 3637 3690 . + . ID=g7557.t1.exon1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . CDS 3670 3690 . + 0 ID=cds.g7557.t1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . exon 3857 3901 . + . ID=g7557.t1.exon2;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . CDS 3857 3901 . + 0 ID=cds.g7557.t1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . exon 4273 4389 . + . ID=g7557.t1.exon3;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . CDS 4273 4389 . + 0 ID=cds.g7557.t1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . exon 4898 5265 . + . ID=g7557.t1.exon4;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . CDS 4898 5062 . + 0 ID=cds.g7557.t1;Parent=g7557.t1 NODE_1552_length_10521_cov_42.0633 . three_prime_UTR 5063 5265 . + . ID=g7557.t1.utr3p1;Parent=g7557.t1 #PROT g7557.t1 g7557 MSGALKQSTNIVGLAVIPNAREALVNLYKTTLATLQTMPSDAAYRKNVEKITQHRLNVVEAEANHSAIESKIGCGQVEELIVQAQDELGLAKKMTEWKPWDRLVAQAPANQWQWP* # ORIGINAL: g5447.t1 original gene structure, not modified by PASA NODE_3293_length_3809_cov_36.3168 AUGUSTUS gene 1238 3726 . + . ID=g5447;Name=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS mRNA 1238 3726 . + . ID=g5447.t1;Parent=g5447;Name=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 1238 1375 . + . ID=g5447.t1.exon1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 1238 1375 . + 0 ID=cds.g5447.t1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 1592 1628 . + . ID=g5447.t1.exon2;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 1592 1628 . + 0 ID=cds.g5447.t1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 1984 2038 . + . ID=g5447.t1.exon3;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 1984 2038 . + 2 ID=cds.g5447.t1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 2281 3128 . + . ID=g5447.t1.exon4;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 2281 3128 . + 1 ID=cds.g5447.t1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 3305 3387 . + . ID=g5447.t1.exon5;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 3305 3387 . + 2 ID=cds.g5447.t1;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS exon 3616 3726 . + . ID=g5447.t1.exon6;Parent=g5447.t1 NODE_3293_length_3809_cov_36.3168 AUGUSTUS CDS 3616 3726 . + 0 ID=cds.g5447.t1;Parent=g5447.t1 #PROT g5447.t1 g5447 MAVVTAADRHGAGCVGRCTDCVNSVSCDPALGCVCLFGWAGPLCDKPVYASLQPVLTKVTATTVELQWMFASTEAIEYRLRRTRIESVSLCNEPLTLADDACIREIETGESFIRPFFESTSVRVDTDLYPATEYRYRLQIRSRDIIVDAERFATVRTMPASPPPHVTVSGAYGMGDGVLRVTWETVSDENGYVSKYEVYRGCGGEYSGNVTLLASLARDARHWDDTTVIANVMYHYVVRAVVDGSTETSRVTLAQPLPSASNASRSTGVLSDASLPSTTANVAGASSSSSATVVATAVVVPVVAVTIMLAIMRRWYIRARDHKRRLVHADFLERLLASGNVGAAEIDRQSIALLEQIGAGEFGVVFRARVATPDGRIRICAVKTLKQNANLDERHEFMEEALIMQGLRCVPCTHYPCVLLTCS* # ORIGINAL: g507.t1 original gene structure, not modified by PASA NODE_3378_length_3594_cov_40.1424 AUGUSTUS gene 2425 3541 . - . ID=g507;Name=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS mRNA 2425 3541 . - . ID=g507.t1;Parent=g507;Name=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS exon 3508 3541 . - . ID=g507.t1.exon1;Parent=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS CDS 3508 3541 . - 0 ID=cds.g507.t1;Parent=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS exon 3109 3332 . - . ID=g507.t1.exon2;Parent=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS CDS 3109 3332 . - 2 ID=cds.g507.t1;Parent=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS exon 2425 2742 . - . ID=g507.t1.exon3;Parent=g507.t1 NODE_3378_length_3594_cov_40.1424 AUGUSTUS CDS 2425 2742 . - 0 ID=cds.g507.t1;Parent=g507.t1 #PROT g507.t1 g507 MMVFQNPMAGNGIRASRNNRETRPTDNALLRTNGAADLKYSADALRVRRISEYDEPTYSAPVVRNKDENVLYATLVQKNKAPAKGEVIYGNYDSARGEDDGHYSALRTDEPLYQSPSAVGGAYSTVDLDDHYDVLKTKPVELQYADINFGASRQSEPVQYADIELVERRSRVAPSTNRHSEHIYGNSSEVE* # PASA_UPDATE: g506.t1, single gene model update, valid-1, status:[pasa:asmbl_5952,status:3], valid-1 NODE_3378_length_3594_cov_40.1424 . gene 1 1868 . - . ID=g506;Name=g506.t1 NODE_3378_length_3594_cov_40.1424 . mRNA 1 1868 . - . ID=g506.t1;Parent=g506;Name=g506.t1 NODE_3378_length_3594_cov_40.1424 . five_prime_UTR 1764 1868 . - . ID=g506.t1.utr5p1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . exon 1731 1868 . - . ID=g506.t1.exon1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . CDS 1731 1763 . - 0 ID=cds.g506.t1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . exon 1436 1516 . - . ID=g506.t1.exon2;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . CDS 1436 1516 . - 0 ID=cds.g506.t1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . exon 1168 1233 . - . ID=g506.t1.exon3;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . CDS 1168 1233 . - 0 ID=cds.g506.t1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . exon 966 995 . - . ID=g506.t1.exon4;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . CDS 966 995 . - 0 ID=cds.g506.t1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . exon 1 622 . - . ID=g506.t1.exon5;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . CDS 443 622 . - 0 ID=cds.g506.t1;Parent=g506.t1 NODE_3378_length_3594_cov_40.1424 . three_prime_UTR 1 442 . - . ID=g506.t1.utr3p1;Parent=g506.t1 #PROT g506.t1 g506 MSQPPYGYPGAPYGAPPGAYPPGAYPPPGAYPQPGYGAPAYGAPPMGAYPPPGAYPPPGMPYGAPAYPPGYAAPHPQPGYYPPPMHATPMMYPTQTHVVVGAPMYGRPMKYKHHGMKFKRPKFKRFKYK* # ORIGINAL: g10725.t1 original gene structure, not modified by PASA NODE_2847_length_4981_cov_40.31 AUGUSTUS gene 3467 4381 . - . ID=g10725;Name=g10725.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS mRNA 3467 4381 . - . ID=g10725.t1;Parent=g10725;Name=g10725.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS exon 3467 4381 . - . ID=g10725.t1.exon1;Parent=g10725.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS CDS 3467 4381 . - 0 ID=cds.g10725.t1;Parent=g10725.t1 #PROT g10725.t1 g10725 MASQPSVSFLSLPIEVLLWQFVPFLSNNELASLAGVNSRLRCVLKHVRVYTLRSAIAKEYWESAAIRNAVWADIPRERLVLNLSGISVDTDVSVLGGVHSLILSFCKGVTDVSALGGVHSLDLSGCQGVTDVSALGGVHSLNLADCYGVKDVSALGGVHSLDLTYCKGVTDVSALGGVHSLNLSDCYRVTDVSALCGVHSLNLSGCDRVTDVSALGGVHFLDLCYCNGVTDVSSLGGVHSLNLCYCKGVTDVSALGAVHSLNLSYCKGVTDVSALGAVHSLNLSDCKGVTEVSALGSVHSLKLS* # ORIGINAL: g10724.t1 original gene structure, not modified by PASA NODE_2847_length_4981_cov_40.31 AUGUSTUS gene 279 1250 . - . ID=g10724;Name=g10724.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS mRNA 279 1250 . - . ID=g10724.t1;Parent=g10724;Name=g10724.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS exon 631 1250 . - . ID=g10724.t1.exon1;Parent=g10724.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS CDS 631 1250 . - 0 ID=cds.g10724.t1;Parent=g10724.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS exon 279 449 . - . ID=g10724.t1.exon2;Parent=g10724.t1 NODE_2847_length_4981_cov_40.31 AUGUSTUS CDS 279 449 . - 1 ID=cds.g10724.t1;Parent=g10724.t1 #PROT g10724.t1 g10724 MTPNTRDETDCIVVEQARASQCAFVDSQSRDVNNVTVVAMAPGPWLDRTAGAVQLAYPPAAVAQLPTAQKMPATGGLASMDSPPSAVISDAPNAAAAHTGTYTSASVQTMGPTAGQSPICARDGIVWNCVQDPRMTGLMMQSYNPYVSFFGCVKDEKSALCVLNFAKKIGVRKCKERPRDVNFGPGQGYIYDTQESGLQRWTDTVKWGDSLHPGGRLMMYKEVETFYDERLHKKRRREKTGGMRKVTLADPTSTLRLVNYYDE # PASA_UPDATE: g64.t1, single gene model update, valid-1, status:[pasa:asmbl_2176,status:12], valid-1 NODE_1621_length_10153_cov_39.9081 . gene 225 4618 . - . ID=g64;Name=g64.t1 NODE_1621_length_10153_cov_39.9081 . mRNA 225 4618 . - . ID=g64.t1;Parent=g64;Name=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 4580 4618 . - . ID=g64.t1.exon1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 4580 4618 . - 0 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 4307 4407 . - . ID=g64.t1.exon2;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 4307 4407 . - 0 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 3939 4007 . - . ID=g64.t1.exon3;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 3939 4007 . - 1 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 3640 3752 . - . ID=g64.t1.exon4;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 3640 3752 . - 1 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 3355 3452 . - . ID=g64.t1.exon5;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 3355 3452 . - 2 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 3001 3163 . - . ID=g64.t1.exon6;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 3001 3163 . - 0 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 2610 2736 . - . ID=g64.t1.exon7;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 2610 2736 . - 2 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 2071 2179 . - . ID=g64.t1.exon8;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 2071 2179 . - 1 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 1646 1818 . - . ID=g64.t1.exon9;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 1646 1818 . - 0 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 1242 1487 . - . ID=g64.t1.exon10;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 1242 1487 . - 1 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 746 1078 . - . ID=g64.t1.exon11;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 746 1078 . - 1 ID=cds.g64.t1;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . exon 225 465 . - . ID=g64.t1.exon12;Parent=g64.t1 NODE_1621_length_10153_cov_39.9081 . CDS 225 465 . - 1 ID=cds.g64.t1;Parent=g64.t1;3_prime_partial=true #PROT g64.t1 g64 MAGSFQISSLLEKMSSSDKDFRFMATNDLMTELQRETFKFDGDQESRVIGAVMKLLDDKNGEVQNLAVKCFAPLVHKVRDSSVESIADDLCTFMLSDKEQLRDVSSMALKTSLAVLSVASPVATTVCRKLIPRLQTALMKDNVPVQLEALDILSDLLNQFGPSVSGNLVSLSESLLGLLTSAKPVVRKRATSTLGSLVASAPDSLLTNVVSEVVARLRKGGNNALIRTYVQTITVISRNTGHKMGRFLADILPLIVSNAKVEGDDELTENCIQALESFILKTPKEIAPAVHEIVTMCLQFMAHDPNYNYDDDDDMESEPMETDGDEEDAEGDDEYSDDEDMSFKVRRAALKCIGAAVSTRTESLSDFYRVVSPALIARFKEREENVKADVFGAYVALLRQTRAIATPTEGETSPLALLKAEVPRMVAMITRQMRDKSQKTRIGCFSLLRELILTLPNALGDGIGTVFVSLRTTVGDRAASGTLRIEALALLGLILSTHDVATVQPHAVGLVKPVVSAVGDPFYKIVSEGLLVSAQLARTLRPTDGSAATVSGNELVEASRPLFDSTFARMKALDADQEVKERSVLCMARIIANLGDVLGPQASE # PASA_UPDATE: g65.t1, single gene model update, valid-1, status:[pasa:asmbl_2175,status:3], valid-1 NODE_1621_length_10153_cov_39.9081 . gene 5352 9091 . + . ID=g65;Name=g65.t1 NODE_1621_length_10153_cov_39.9081 . mRNA 5352 9091 . + . ID=g65.t1;Parent=g65;Name=g65.t1 NODE_1621_length_10153_cov_39.9081 . five_prime_UTR 5352 5566 . + . ID=g65.t1.utr5p1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 5352 5608 . + . ID=g65.t1.exon1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 5567 5608 . + 0 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 5821 5905 . + . ID=g65.t1.exon2;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 5821 5905 . + 0 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 6077 6142 . + . ID=g65.t1.exon3;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 6077 6142 . + 2 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 6408 6574 . + . ID=g65.t1.exon4;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 6408 6574 . + 2 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 6911 7379 . + . ID=g65.t1.exon5;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 6911 7379 . + 0 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 7658 7794 . + . ID=g65.t1.exon6;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 7658 7794 . + 2 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 8036 8169 . + . ID=g65.t1.exon7;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 8036 8169 . + 0 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 8433 8535 . + . ID=g65.t1.exon8;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 8433 8535 . + 1 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . exon 8821 9091 . + . ID=g65.t1.exon9;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . CDS 8821 8907 . + 0 ID=cds.g65.t1;Parent=g65.t1 NODE_1621_length_10153_cov_39.9081 . three_prime_UTR 8908 9091 . + . ID=g65.t1.utr3p1;Parent=g65.t1 #PROT g65.t1 g65 MAQQWLRSMLFQHKYLYVDQAQRDMEIALGAFPSLQPMVEHYVFSNGRQAVLVNLSGTVPIMFAGATYHIPVKVWVLDVHPTAPPICYVTPTPDMCIRASRHVEQNGLIRMPYLHSWSPQGSNMLEMLRILCGIFGQEPPVYARPQQQQQSQQPQQPQQPQQPIQPPRPAQMPYAQPGRPMSGSGVGGMPGGGGPMGAQGMGSTPYPTETTMPMPGQFYPNAGATVGMGIGLGVGAAVGMGGMSAAAAADKRRHDEEEEERAMEAIKVQSLRTAVSEMLQRRLKDHRRTAEIDVEQLFATSSKLEQGKQTLDALFAAIATEEAQAQDSLAKIEAANAELAADILRLEAEKELDADAAVTATSPLYKQLFDLVATENAIEDTLYHLGKALTRGTIDLQTYIKHVRALSRQEFFERAKMKKARRVAGLKDI* # ORIGINAL: g66.t1 original gene structure, not modified by PASA NODE_1621_length_10153_cov_39.9081 AUGUSTUS gene 9554 10153 . - . ID=g66;Name=g66.t1 NODE_1621_length_10153_cov_39.9081 AUGUSTUS mRNA 9554 10153 . - . ID=g66.t1;Parent=g66;Name=g66.t1 NODE_1621_length_10153_cov_39.9081 AUGUSTUS exon 9554 10153 . - . ID=g66.t1.exon1;Parent=g66.t1 NODE_1621_length_10153_cov_39.9081 AUGUSTUS CDS 9554 10153 . - 0 ID=cds.g66.t1;Parent=g66.t1 #PROT g66.t1 g66 PPSPRPFPFCVPHATGNHSCFVYAPRGDASLVIVDCSYELAADSASLWSKLLISHIRPSFAAIFEARPVVQYKSPQSAYIDGGFGDSGATLRMLRTDALARRQPQQQGGALVTCPFLEPPNLVDGPSAALLSAFQYGDVPAALFVVYAEGHVVDVPALGEFSKSFGLPELAGVRGEWKGVAKGRGVASVAKPRPDTLYV* # PASA_UPDATE: g7841.t1, single gene model update, valid-1, status:[pasa:asmbl_6244,status:12], valid-1 NODE_3583_length_3159_cov_41.0113 . gene 2 792 . + . ID=g7841;Name=g7841.t1 NODE_3583_length_3159_cov_41.0113 . mRNA 2 792 . + . ID=g7841.t1;Parent=g7841;Name=g7841.t1 NODE_3583_length_3159_cov_41.0113 . exon 2 197 . + . ID=g7841.t1.exon1;Parent=g7841.t1 NODE_3583_length_3159_cov_41.0113 . CDS 2 197 . + 0 ID=cds.g7841.t1;Parent=g7841.t1;5_prime_partial=true NODE_3583_length_3159_cov_41.0113 . exon 386 792 . + . ID=g7841.t1.exon2;Parent=g7841.t1 NODE_3583_length_3159_cov_41.0113 . CDS 386 513 . + 2 ID=cds.g7841.t1;Parent=g7841.t1 NODE_3583_length_3159_cov_41.0113 . three_prime_UTR 514 792 . + . ID=g7841.t1.utr3p1;Parent=g7841.t1 #PROT g7841.t1 g7841 THPQRTPHAGHVHAYERSLPVYKESTANSPPTQYFTVGDGGNQEGLASGWKNPQPAWSAVRIAKYGFVRMSVANQTHIEWSWFINPAETDGQETLGDHLWIERPYPR* # ORIGINAL: g7842.t1 original gene structure, not modified by PASA NODE_3583_length_3159_cov_41.0113 AUGUSTUS gene 1845 2964 . + . ID=g7842;Name=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS mRNA 1845 2964 . + . ID=g7842.t1;Parent=g7842;Name=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS exon 1845 1944 . + . ID=g7842.t1.exon1;Parent=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS CDS 1845 1944 . + 0 ID=cds.g7842.t1;Parent=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS exon 2213 2378 . + . ID=g7842.t1.exon2;Parent=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS CDS 2213 2378 . + 2 ID=cds.g7842.t1;Parent=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS exon 2811 2964 . + . ID=g7842.t1.exon3;Parent=g7842.t1 NODE_3583_length_3159_cov_41.0113 AUGUSTUS CDS 2811 2964 . + 1 ID=cds.g7842.t1;Parent=g7842.t1 #PROT g7842.t1 g7842 MQRMKSIRAAAVVVACMLAAQSHFALVAASGQRPLVGGPGRALSFDHLRADAVGDTWDEATQPTENMTVEFWINLYDSYLDQQNILSYSTFDSSQTPVYEQSNEIVIGALPQSFVFCRIDCDYCETANGFPCTFYDAGW* # PASA_UPDATE: g902.t1, single gene model update, valid-1, status:[pasa:asmbl_7470,status:12], valid-1 NODE_4602_length_1414_cov_37.9425 . gene 184 1134 . - . ID=g902;Name=g902.t1 NODE_4602_length_1414_cov_37.9425 . mRNA 184 1134 . - . ID=g902.t1;Parent=g902;Name=g902.t1 NODE_4602_length_1414_cov_37.9425 . exon 990 1134 . - . ID=g902.t1.exon1;Parent=g902.t1 NODE_4602_length_1414_cov_37.9425 . CDS 990 1134 . - 0 ID=cds.g902.t1;Parent=g902.t1 NODE_4602_length_1414_cov_37.9425 . exon 648 831 . - . ID=g902.t1.exon2;Parent=g902.t1 NODE_4602_length_1414_cov_37.9425 . CDS 648 831 . - 2 ID=cds.g902.t1;Parent=g902.t1 NODE_4602_length_1414_cov_37.9425 . exon 184 307 . - . ID=g902.t1.exon3;Parent=g902.t1 NODE_4602_length_1414_cov_37.9425 . CDS 184 307 . - 1 ID=cds.g902.t1;Parent=g902.t1;3_prime_partial=true #PROT g902.t1 g902 MHSLYRQKTSILQILLGVARKPDAIATWDGRLDLPEQELLRADCVNKAGENAALATEMEAILTFYCKARTVEYRTDRGWVHLLRPLMELGLDRSSIYNCFYALASSFIPKMTDADSPVYQLLRLLVLYHDPEVCNFLDSRKIAVESYARMW # ORIGINAL: g8502.t1 original gene structure, not modified by PASA NODE_991_length_14998_cov_42.4645 AUGUSTUS gene 3543 4843 . + . ID=g8502;Name=g8502.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS mRNA 3543 4843 . + . ID=g8502.t1;Parent=g8502;Name=g8502.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 3543 4043 . + . ID=g8502.t1.exon1;Parent=g8502.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 3543 4043 . + 0 ID=cds.g8502.t1;Parent=g8502.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 4202 4843 . + . ID=g8502.t1.exon2;Parent=g8502.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 4202 4843 . + 0 ID=cds.g8502.t1;Parent=g8502.t1 #PROT g8502.t1 g8502 MAAVAVQLAPTEALESLMPHEDGENFYDLYEPGDILGHGLSSVVRKCTLKETRDQLAVKIIDRTDERLDEESILNEIRVLQTLRGHPNIILLRDAFVTSANYYLVFDLASGGELFDKLTEAVHFPEGKAKGIMRQIFSALAYIHEYGIVHRDMKPENILLTDDGTIKVADFGFARKLLPDEQLREFCGTPGYMSPEAVRCSMDETANGYGLAVDEWACGVIMYTLLVGFPPFWNSNKMVLLRTIRRGHFDFVRPYWDNISPEAKDLVTRLLCVDPARRLSSTDALQHPWLSAPRTASGLSPLRRFRSVVFAVIAMRLIECGWIGRVSLQLSMEQADASVYASKRGRELIDKCAFQIYSHWVKKNNDQNRAALFENFVRLT* # ORIGINAL: g8504.t1 original gene structure, not modified by PASA NODE_991_length_14998_cov_42.4645 AUGUSTUS gene 6864 8166 . + . ID=g8504;Name=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS mRNA 6864 8166 . + . ID=g8504.t1;Parent=g8504;Name=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 6864 7069 . + . ID=g8504.t1.exon1;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 6864 7069 . + 0 ID=cds.g8504.t1;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 7157 7208 . + . ID=g8504.t1.exon2;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 7157 7208 . + 1 ID=cds.g8504.t1;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 7305 7640 . + . ID=g8504.t1.exon3;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 7305 7640 . + 0 ID=cds.g8504.t1;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 7732 8166 . + . ID=g8504.t1.exon4;Parent=g8504.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 7732 8166 . + 0 ID=cds.g8504.t1;Parent=g8504.t1 #PROT g8504.t1 g8504 MASRYCTDGAVGQFAPSPFYGCYLLLSKNPRYRGYTYIGFTVDPQRRLKQHNGGKDKGGAWRTSGRGPWELVCMVYGFMDEISALQFEWAWQNPESTRRLRSLPKEVRTRNKGATAVENRVRTVAALLSVGPFCRLPLTLHWISEELRTKCMRWTEKLPALVRVRNGPISVRPKPRAQGVSPAAEPPKQCAVCNRQLEISTPALRCYADGCDAASHVRCLGTYFLESAGCSDNCLPVGGRCPACNTRVLWGELVRPLTAPGMPYNCSARRKPHRRRGADGDRSDDAECMDDGDKPPAPMQQHSDDEFEGVGMSITDDDDDGYSCADDPGEGRVGEWEEFDLT* # ORIGINAL: g8503.t1 original gene structure, not modified by PASA NODE_991_length_14998_cov_42.4645 AUGUSTUS gene 5178 6465 . - . ID=g8503;Name=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS mRNA 5178 6465 . - . ID=g8503.t1;Parent=g8503;Name=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 6297 6465 . - . ID=g8503.t1.exon1;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 6297 6465 . - 0 ID=cds.g8503.t1;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 5649 6214 . - . ID=g8503.t1.exon2;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 5649 6214 . - 2 ID=cds.g8503.t1;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 5423 5495 . - . ID=g8503.t1.exon3;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 5423 5495 . - 0 ID=cds.g8503.t1;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 5178 5260 . - . ID=g8503.t1.exon4;Parent=g8503.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 5178 5260 . - 2 ID=cds.g8503.t1;Parent=g8503.t1 #PROT g8503.t1 g8503 MADNASAAGDAAPGGDQPPTPFKANFNFGPMKPPEVLMMERFFESCVFKTGVSGVLGFALGGVFGIFTASMDPTVGMVQTPPPSPAPAPAAAAAAAAATPATTPATSGASASHSAHPPPLEHAPTTVPTGAPHSPAQPPSATAGLRGTNVGVVTTAHGPVLSGAVSTSSLGGAVSGEAAAAASHLHPPAMQVPQAGAIPGFEFGDPGKLKLSKMVKDIGARSVSFAKNFGLIGAMFSGSECLIESYRAKNDRLNSLYAGCATGGIVGLRAGPTAGAFGCASFAAFSVAIDYFLGGH* # PASA_UPDATE: g8501.t1, single gene model update, valid-1, status:[pasa:asmbl_10246,status:3], valid-1 NODE_991_length_14998_cov_42.4645 . gene 498 3046 . - . ID=g8501;Name=g8501.t1 NODE_991_length_14998_cov_42.4645 . mRNA 498 3046 . - . ID=g8501.t1;Parent=g8501;Name=g8501.t1 NODE_991_length_14998_cov_42.4645 . five_prime_UTR 2814 3046 . - . ID=g8501.t1.utr5p1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 2782 3046 . - . ID=g8501.t1.exon1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 2782 2813 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 2473 2635 . - . ID=g8501.t1.exon2;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 2473 2635 . - 1 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 2151 2357 . - . ID=g8501.t1.exon3;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 2151 2357 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 1978 2074 . - . ID=g8501.t1.exon4;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 1978 2074 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 1686 1860 . - . ID=g8501.t1.exon5;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 1686 1860 . - 2 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 1482 1578 . - . ID=g8501.t1.exon6;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 1482 1578 . - 1 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 1173 1322 . - . ID=g8501.t1.exon7;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 1173 1322 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 940 1050 . - . ID=g8501.t1.exon8;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 940 1050 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . exon 498 840 . - . ID=g8501.t1.exon9;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . CDS 610 840 . - 0 ID=cds.g8501.t1;Parent=g8501.t1 NODE_991_length_14998_cov_42.4645 . three_prime_UTR 498 609 . - . ID=g8501.t1.utr3p1;Parent=g8501.t1 #PROT g8501.t1 g8501 MGLSDKQKEELNQAIVDYLKSAGYNESVSVFAREASVPQLDASAAAKIAGLLEKKWTSVIRLQKKVMELEASLAEAKTEIRDGGHIKRPAGSTDWIPRPPERYTLTGHRSPITKVIFHKSFSVIVSASEDATIKVWDFETGEYERTLKGHTNAVQDVAFDATGNLLASCSADLTVKLWDFTSFECTKTLRGHDHNVSSVAFLPSSDFVVSASRDKTIKIWEVTTGYCTKTLSGHGEWVRSVCVSADGQFIVSCSNDQSVRVWAVSTGEVKADLRDHTHVVECAIFAPANAVAAILDGIADAASGSSGAKPAAKPSASSLYVVSGSRDKTIKIWDVSTGQCVLNLLGHDNWVRGLAFHPGGKIILSVADDKTLRVWDIKTRRCTKTLDAHTHFVTTVAFHPASPCVVTGSVDQTIKVWECR* # ORIGINAL: g8507.t1 original gene structure, not modified by PASA NODE_991_length_14998_cov_42.4645 AUGUSTUS gene 11589 14856 . - . ID=g8507;Name=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS mRNA 11589 14856 . - . ID=g8507.t1;Parent=g8507;Name=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 14673 14856 . - . ID=g8507.t1.exon1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 14673 14856 . - 1 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 13791 14522 . - . ID=g8507.t1.exon2;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 13791 14522 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 13470 13628 . - . ID=g8507.t1.exon3;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 13470 13628 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 13307 13325 . - . ID=g8507.t1.exon4;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 13307 13325 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 13000 13148 . - . ID=g8507.t1.exon5;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 13000 13148 . - 2 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 12757 12864 . - . ID=g8507.t1.exon6;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 12757 12864 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 12378 12458 . - . ID=g8507.t1.exon7;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 12378 12458 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 12148 12211 . - . ID=g8507.t1.exon8;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 12148 12211 . - 0 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 11930 12044 . - . ID=g8507.t1.exon9;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 11930 12044 . - 2 ID=cds.g8507.t1;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 11589 11802 . - . ID=g8507.t1.exon10;Parent=g8507.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 11589 11802 . - 1 ID=cds.g8507.t1;Parent=g8507.t1 #PROT g8507.t1 g8507 PNYRGGVGSQFDPEDSSLHSFGDAADDGLFRRLFFVHDTSAGGDGDEETTDDAILYFYPHETVVDRQLNVAGYIEGLVTFVSNFTQSPPLVLTLEREQVAYRRIGRYALVCAHTLFVWWSCRHFACVALPFHMPGVLPVRGACLRELAAGHVVADGDVFRTSPKNIPQNIAQGLGGDVGETELAIVSRLNLMCDAFHLYYGSFENIRRVRKCSFSMQLRSACASQPPFLVCAGLEGAREPPLIAPSSLILTKQQQPRYPQSVKGKQTRWLAEVRSAWKRIYHRFRAAEAPLTAAMQPMPVVELRRNENRVFIAASQILASACDRTDVLGGCILVGSAVLSTTLGPHLATLLAMGLPEMVQASQSWTNDPTAFVELLPSHVTQSQLALMRARGDDATSTLIRESPHDTSCKGQELCKCPTADLLLIRVADICLALSLEATAICDGEALTCAKESFEDDMLHLYRLFTSEMGGEGALRMEPKPTNRALHAVFDSTCNALQASPVDSAIESDRTFAAAVASIHEMYRRMDRPEFGQVILSNCAPPADVPTPRDRRSNHRGMVHSYNSFGRESFQYSPHVTVEDARLEPNAVEVADAKARECVHAAHGVIT* # ORIGINAL: g8500.t1 original gene structure, not modified by PASA NODE_991_length_14998_cov_42.4645 AUGUSTUS gene 53 393 . + . ID=g8500;Name=g8500.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS mRNA 53 393 . + . ID=g8500.t1;Parent=g8500;Name=g8500.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 53 159 . + . ID=g8500.t1.exon1;Parent=g8500.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 53 159 . + 2 ID=cds.g8500.t1;Parent=g8500.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS exon 298 393 . + . ID=g8500.t1.exon2;Parent=g8500.t1 NODE_991_length_14998_cov_42.4645 AUGUSTUS CDS 298 393 . + 0 ID=cds.g8500.t1;Parent=g8500.t1 #PROT g8500.t1 g8500 NDTIDGVMEGSGDEAESDLIMNQVLDEIGIEVSTKMASAPSHKLASSNASAAESDDLVERMAQLRS* # PASA_UPDATE: g8505.t1, single gene model update, valid-1, status:[pasa:asmbl_10247,status:3], valid-1 NODE_991_length_14998_cov_42.4645 . gene 8155 9130 . - . ID=g8505;Name=g8505.t1 NODE_991_length_14998_cov_42.4645 . mRNA 8155 9130 . - . ID=g8505.t1;Parent=g8505;Name=g8505.t1 NODE_991_length_14998_cov_42.4645 . five_prime_UTR 9092 9130 . - . ID=g8505.t1.utr5p1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . exon 8958 9130 . - . ID=g8505.t1.exon1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . CDS 8958 9091 . - 0 ID=cds.g8505.t1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . exon 8791 8869 . - . ID=g8505.t1.exon2;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . CDS 8791 8869 . - 1 ID=cds.g8505.t1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . exon 8591 8657 . - . ID=g8505.t1.exon3;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . CDS 8591 8657 . - 0 ID=cds.g8505.t1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . exon 8155 8496 . - . ID=g8505.t1.exon4;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . CDS 8309 8496 . - 2 ID=cds.g8505.t1;Parent=g8505.t1 NODE_991_length_14998_cov_42.4645 . three_prime_UTR 8155 8308 . - . ID=g8505.t1.utr3p1;Parent=g8505.t1 #PROT g8505.t1 g8505 MSDTQRDAHRDAPASSEENVAVDGSQSSAASSGFKFSETPSLEEIRATVGQFVRDRNWEQFHQPRNLVLALVGEVGELSECFMWKGEVAKGLPGWTDREREHLGEEMADVFIYLIRLAEQCGVDLPAAVERKVGLNAQKYPIDKAYGSVKKYSEL* # PASA_UPDATE: g8506.t1, single gene model update, valid-1, status:[pasa:asmbl_10245,status:3], valid-1 NODE_991_length_14998_cov_42.4645 . gene 9459 11249 . + . ID=g8506;Name=g8506.t1 NODE_991_length_14998_cov_42.4645 . mRNA 9459 11249 . + . ID=g8506.t1;Parent=g8506;Name=g8506.t1 NODE_991_length_14998_cov_42.4645 . five_prime_UTR 9459 9538 . + . ID=g8506.t1.utr5p1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . exon 9459 9566 . + . ID=g8506.t1.exon1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . CDS 9539 9566 . + 0 ID=cds.g8506.t1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . exon 9743 9829 . + . ID=g8506.t1.exon2;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . CDS 9743 9829 . + 2 ID=cds.g8506.t1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . exon 10002 10230 . + . ID=g8506.t1.exon3;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . CDS 10002 10230 . + 2 ID=cds.g8506.t1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . exon 10590 11249 . + . ID=g8506.t1.exon4;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . CDS 10590 10893 . + 1 ID=cds.g8506.t1;Parent=g8506.t1 NODE_991_length_14998_cov_42.4645 . three_prime_UTR 10894 11249 . + . ID=g8506.t1.utr3p1;Parent=g8506.t1 #PROT g8506.t1 g8506 MLRHTLLCLGRPCARAPRFATAQIARYASAAYQPKDSKNVSPPPLADDDKVSMTELLDRGAQSLLLTELIRGLGLTLEYFFRPKVTLYYPFEKGALSSRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYSTERHEELLYNKEKLLNNGDKWETEIAANLQQEFLYR* # ORIGINAL: g2519.t1 original gene structure, not modified by PASA NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS gene 24 1193 . + . ID=g2519;Name=g2519.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS mRNA 24 1193 . + . ID=g2519.t1;Parent=g2519;Name=g2519.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS exon 24 1193 . + . ID=g2519.t1.exon1;Parent=g2519.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS CDS 24 1193 . + 0 ID=cds.g2519.t1;Parent=g2519.t1 #PROT g2519.t1 g2519 MEQINASFQGMLGPDFDALCPEFNPDSLAALIANFYQWESASVSSAPIDTSAPIDASAPIDASAPIDASELINERTLQMEQINADIDALFQQTLGPDFDDVCSDITAETLAALIADFYQSEPAPESSAPIISDTLPTDEIETKAQSITETLPVYNDTQMVDDEAPIEADMSEQATTTPSQTPTERDASIITVGPFSFGPGDAVMIKVDDLSTCEQPALVSDIKTDSMTGDKLVVVEWLYEPSQFVLEFPVPHVKSKDCFSKRELFRSNHVQTVHVNTINGPCHMQTIQGYMRSEPVGRHFFTRTGIRIRRNKPAILSRVSKIACIGCRKIVNPDNASDENTIVLCTKCNRVSHVKCIEHRRALRPAPTHKSKYSSRFCCESENYHLAFE* # ORIGINAL: g2520.t1 original gene structure, not modified by PASA NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS gene 1597 4630 . + . ID=g2520;Name=g2520.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS mRNA 1597 4630 . + . ID=g2520.t1;Parent=g2520;Name=g2520.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS exon 1597 4630 . + . ID=g2520.t1.exon1;Parent=g2520.t1 NODE_2966_length_4630_cov_40.3796_potentialcontaminant AUGUSTUS CDS 1597 4630 . + 0 ID=cds.g2520.t1;Parent=g2520.t1 #PROT g2520.t1 g2520 MASVRNQLQADIVELFPALRNEHVAFLLSIVEKIAQETYEIAQFDDYNDLLADPKTTKALVMLSLPHSSTPDKMTDLRDFFNETNVIHDFIGRMDTTDERVVKQLLEKHRDSVLETISIVHNKLAVNYRTVNYTDDQTDLFKNRVPLFNQTHKFAAEAARGRPVPPAHSPISPAVAWHILGIGPFDVLLYGCNKRHSRRPARSRLADYIDKVVTWEGEWYLNRQAVSNAMAAIKNDFDMAITRLRANQPVVRLACMASKWLWKAGFITRITPATNSDRECEFERYFLNNKPVSFSGGWVTTGEDATRHYEANPAGWTDLYAMHWVVQLQLMHLAINQRVILVTGATGVGKSRIVPRLLAHAHRILFSDNPAETTRSARIDKSGGMNCEVVVTQPRINAVENAWENTATDMGGVHLPIHYKHSKGQHPPPAKREREYPRPFIMFTTDGSVVRELTAKPPLSFSMLVVDEAHEHNVNMDMILTHAKHPAGLRLAIISATMDDDEPRYRQFYREVDSCALDRRIHISVPGGNATLFKIDETVLPTVLPTVTELIDRAAKTVVSILKTHAEGNVLVFMPGVQEIADTIEQIRLAYDSQSVMVTSLFSGTSKVNRDAIEKGRASEIEGASRSATRIVIVSTNIAEASITIGGLKFVVDSGCEKAKRFNPATMTFSLKLGPITKSQYLQRRGRVGRNSAGQVYLLYDPAKLADRPNFKISNEPLTMTVFDLLVSGWTSREIYDDDATNYLVHPNEREIKRPKYENDPLTVPPNCFLLDEAFRELGVLGLTSGQSRSTELTPLGEAMAKTSWGGLEFSLHDKIALAHGTANGCGEVVLAILCMLAIEQYATGAMSKWLALRELMVPYHAHTSDFLFLLAVYERVLTRPHLCFVVPDEAKDSVKKWTEKMENYLPEYVKVKHELLELPLKHVGGSLPERVAAAFAAGYAHNAFELHNGKLTKQINGRLVDVVLNEETVVRHGHKSMFAYALSLVNDDGDEEDGSECVRADLAQARTAAP # ORIGINAL: g5133.t1 original gene structure, not modified by PASA NODE_4657_length_1362_cov_37.2385 AUGUSTUS gene 250 1263 . + . ID=g5133;Name=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS mRNA 250 1263 . + . ID=g5133.t1;Parent=g5133;Name=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS exon 250 418 . + . ID=g5133.t1.exon1;Parent=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS CDS 250 418 . + 2 ID=cds.g5133.t1;Parent=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS exon 741 852 . + . ID=g5133.t1.exon2;Parent=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS CDS 741 852 . + 1 ID=cds.g5133.t1;Parent=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS exon 1111 1263 . + . ID=g5133.t1.exon3;Parent=g5133.t1 NODE_4657_length_1362_cov_37.2385 AUGUSTUS CDS 1111 1263 . + 0 ID=cds.g5133.t1;Parent=g5133.t1 #PROT g5133.t1 g5133 ANHRFCAEAPDWGFTNFLPLNDLHNPAKKYIVDNKLTVEINVRVVAGSGSIWGNASTWDSKKETGFVGLKNQGATCYMNSLLQTLYFTNKFRKAVYHMTTDKYDAAKSVPLALQHVFYDLQHSDAAVGTTQLTKVGQNGLQLS* # ORIGINAL: g2057.t1 original gene structure, not modified by PASA NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS gene 1654 2031 . + . ID=g2057;Name=g2057.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS mRNA 1654 2031 . + . ID=g2057.t1;Parent=g2057;Name=g2057.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS exon 1654 2031 . + . ID=g2057.t1.exon1;Parent=g2057.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS CDS 1654 2031 . + 0 ID=cds.g2057.t1;Parent=g2057.t1 #PROT g2057.t1 g2057 MADRKQELLIGNLRRFFQNPERLSQLETLLSEESTISKRVFQKFITYSKKNKLLMLNTLSMQVTESYDLESRTHKRKNFDMFCRGTRIMFQVSEDKSYVTTVGQLNFFRWVIENKLVEFIESHMN* # ORIGINAL: g2058.t1 original gene structure, not modified by PASA NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS gene 4034 4600 . - . ID=g2058;Name=g2058.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS mRNA 4034 4600 . - . ID=g2058.t1;Parent=g2058;Name=g2058.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS exon 4034 4600 . - . ID=g2058.t1.exon1;Parent=g2058.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS CDS 4034 4600 . - 0 ID=cds.g2058.t1;Parent=g2058.t1 #PROT g2058.t1 g2058 MFCTQCHVSFSWSTGQKEDGLVHNPHYYDWLAQQATTRRTVTAAELERIACGEIPNEYTLWDHLHGICEDALQQPRQLQKILGLYAIVNHARVVEDPRWRRNQTDRDPLDLRVKYLIGEIDEHQWKCRLQRREKAREKARTAVQLVDAIATIASDLIRRAFATTTPADAIILNFIMKRSISIRSSGRK* # ORIGINAL: g2059.t1 original gene structure, not modified by PASA NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS gene 5672 7000 . + . ID=g2059;Name=g2059.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS mRNA 5672 7000 . + . ID=g2059.t1;Parent=g2059;Name=g2059.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS exon 5672 6265 . + . ID=g2059.t1.exon1;Parent=g2059.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS CDS 5672 6265 . + 0 ID=cds.g2059.t1;Parent=g2059.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS exon 6614 7000 . + . ID=g2059.t1.exon2;Parent=g2059.t1 NODE_2248_length_7088_cov_38.94_potentialcontaminant AUGUSTUS CDS 6614 7000 . + 0 ID=cds.g2059.t1;Parent=g2059.t1 #PROT g2059.t1 g2059 MYNAVADLRTDNQAVVIAADFVHSDEFPLVAWLAFALAPQTPRIWDAIRILHTRVRSRCALHNLEKVMRRLGAASDDSLGEFIYDMREYNFEHFGRFTPTPVPGVDGLYLGTIADTSEVILRELGIKHVASFSPENHERINKVKSDMPIHWLVNNKLHDGGMSALHLFEEFCKFVDEVPPGEPILVHCRIGYSRSPTMQEYLDAATNMSIGVINNRFGVAAGMRNPCGGLSQTCQVAMESYIQNRGPSATRAVTTSPMFVPPNVCTTMSSDYVRAMLDAQSLRSSVGQLLNPPIVGTVQRNVADDFANWGLDSRTFIKENFKHAPR* # ORIGINAL: g2856.t1 original gene structure, not modified by PASA NODE_4548_length_1474_cov_43.2702_potentialcontaminant AUGUSTUS gene 2 435 . + . ID=g2856;Name=g2856.t1 NODE_4548_length_1474_cov_43.2702_potentialcontaminant AUGUSTUS mRNA 2 435 . + . ID=g2856.t1;Parent=g2856;Name=g2856.t1 NODE_4548_length_1474_cov_43.2702_potentialcontaminant AUGUSTUS exon 2 435 . + . ID=g2856.t1.exon1;Parent=g2856.t1 NODE_4548_length_1474_cov_43.2702_potentialcontaminant AUGUSTUS CDS 2 435 . + 2 ID=cds.g2856.t1;Parent=g2856.t1 #PROT g2856.t1 g2856 SVALLSQREVPARPSTSASAAGNLGDAYEGDMHFVHLVGEEEPGMSCYTDMDLTMTADCRGENYITSPYSRGRHDGNLGDDGFKNTAKSAAAALLNNINEHTNNDATGGLAGNASAYLELGSMPRSVPASSGSAYLEFEGTDQ* # PASA_UPDATE: g8103.t1, single gene model update, valid-1, status:[pasa:asmbl_9773,status:12], valid-1 NODE_86_length_42249_cov_39.9329 . gene 40831 41858 . - . ID=g8103;Name=g8103.t1 NODE_86_length_42249_cov_39.9329 . mRNA 40831 41858 . - . ID=g8103.t1;Parent=g8103;Name=g8103.t1 NODE_86_length_42249_cov_39.9329 . five_prime_UTR 41856 41858 . - . ID=g8103.t1.utr5p1;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . exon 41740 41858 . - . ID=g8103.t1.exon1;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . CDS 41740 41855 . - 0 ID=cds.g8103.t1;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . exon 41195 41380 . - . ID=g8103.t1.exon2;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . CDS 41195 41380 . - 1 ID=cds.g8103.t1;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . exon 40831 41044 . - . ID=g8103.t1.exon3;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . CDS 40960 41044 . - 1 ID=cds.g8103.t1;Parent=g8103.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 40831 40959 . - . ID=g8103.t1.utr3p1;Parent=g8103.t1 #PROT g8103.t1 g8103 MDPLVTRDFVIVYFHTLTESENLPDLSYMRDLYDLVDKRYKRNLKALYIVHPTFWSKCATWFFTTFTATNIKECVRSIESLHELYAVINPDQLNIPPFVIDYDYKENGPYRPVTGAFLTSESAADGDL* # ORIGINAL: g8101.t1 original gene structure, not modified by PASA NODE_86_length_42249_cov_39.9329 AUGUSTUS gene 27071 29398 . - . ID=g8101;Name=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS mRNA 27071 29398 . - . ID=g8101.t1;Parent=g8101;Name=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 29237 29398 . - . ID=g8101.t1.exon1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 29237 29398 . - 0 ID=cds.g8101.t1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 29004 29123 . - . ID=g8101.t1.exon2;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 29004 29123 . - 0 ID=cds.g8101.t1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 28692 28786 . - . ID=g8101.t1.exon3;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 28692 28786 . - 0 ID=cds.g8101.t1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 28152 28272 . - . ID=g8101.t1.exon4;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 28152 28272 . - 1 ID=cds.g8101.t1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 27553 27771 . - . ID=g8101.t1.exon5;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 27553 27771 . - 0 ID=cds.g8101.t1;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 27071 27277 . - . ID=g8101.t1.exon6;Parent=g8101.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 27071 27277 . - 0 ID=cds.g8101.t1;Parent=g8101.t1 #PROT g8101.t1 g8101 MLRMANRCTNADKAPVSKGLLVGVSACSLVANALDARYELKSALRLGLGQQNLQLWRLFTHHFIVLNIGELFLHGFLIYIFRLFERRYGSAKFAAFLCTTGCLATSFELAAVVMGGRLLARPNGGPFAFVFGMFIPFFIDVPSSSTYSAGGLRLSHKLFVYLLGIQLAVSSGTASLVPAACGLVAGAVYRYGPGSIRRLRFPNWFRSLCATWLLPFVASAPPAVSPPGGRPHIGRPQQRFPGDPMFPGNAGRVQAAAPAPVASPEAPSESHVEIIMAMGFSRDDAVRALASAGNNIERAADILLSGS* # PASA_UPDATE: g8099.t1, single gene model update, valid-1, status:[pasa:asmbl_9772,status:3], valid-1 NODE_86_length_42249_cov_39.9329 . gene 19717 23925 . - . ID=g8099;Name=g8099.t1 NODE_86_length_42249_cov_39.9329 . mRNA 19717 23925 . - . ID=g8099.t1;Parent=g8099;Name=g8099.t1 NODE_86_length_42249_cov_39.9329 . five_prime_UTR 23734 23925 . - . ID=g8099.t1.utr5p1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 22320 23925 . - . ID=g8099.t1.exon1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 22320 23733 . - 0 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 21890 22101 . - . ID=g8099.t1.exon2;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 21890 22101 . - 2 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 21403 21599 . - . ID=g8099.t1.exon3;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 21403 21599 . - 0 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 20864 20992 . - . ID=g8099.t1.exon4;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 20864 20992 . - 1 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 20506 20673 . - . ID=g8099.t1.exon5;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 20506 20673 . - 1 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . exon 19717 20202 . - . ID=g8099.t1.exon6;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . CDS 20016 20202 . - 1 ID=cds.g8099.t1;Parent=g8099.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 19717 20015 . - . ID=g8099.t1.utr3p1;Parent=g8099.t1 #PROT g8099.t1 g8099 MAVICHTNMDSIFNEIDAAIGTELSHLSRVPALLSEAKLKRDAIQAGVDALLAPTASVGEAVKDAKNALCELDASSERSAKVSSSLVEQRNAPAALELSLGKLAREINALNRIERYLQCVRCVDTLGRAVANSIAAGDLDGALQPYAILASVRRSVAASSCTALAQYVAETTNHLHASIKKRLFEDGTAALSAIEWPSSLSTAKHEVTSVWEPKISICIDRLLRLQLADVDAADSTALPGGSSKSATPTTTLPRDANLHAIDLLLEPVTKRFRYHFGGKRQTNRKDKPEWFFTHALNLIRDGAPFIARVVQPILAERGLTMRDAEYEYAEGVVALVAGKVASLLPKVISDDDPTLFSHLINETLLFERELSLFGFPPPHSDGAIGIAAEGLKTAAADADRGVCGRCVAQIAAPAHLDRWLEAEWLLANGRFERVMASPSAWQPRYGAFEDVDELRAPECASQLVGILQAVTDRYMSLRSPVDRLRFFETIQERLLVEFHGEIVDFIDYDIRGDSAWERTQLCRLANAAHYVRSAMAEWADQMFFLEIHHKRSGLADQGRQLVDVTGTLFDDLISRYDAIIDIAVERLTETGHSRFAAALKPHLAAKTKYLLTSANAEGLTEISALLYEPLAVASEHITLLRASLAQPLLDRAWQDFARILSERSLHRELILTGKFNAHGVIQLGLDATAIYSVFRELTAKPENYLKEFKEAVILLKQNAQAIGRLLRTLNGSDAHVTRRALDDIGVFRLEPADALAVLARHLDGGAKP* # PASA_UPDATE: g8102.t1, single gene model update, valid-1, status:[pasa:asmbl_9775,status:12], valid-1 NODE_86_length_42249_cov_39.9329 . gene 30279 40769 . + . ID=g8102;Name=g8102.t1 NODE_86_length_42249_cov_39.9329 . mRNA 30279 40769 . + . ID=g8102.t1;Parent=g8102;Name=g8102.t1 NODE_86_length_42249_cov_39.9329 . exon 30279 30497 . + . ID=g8102.t1.exon1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . CDS 30279 30497 . + 0 ID=cds.g8102.t1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . exon 30630 30784 . + . ID=g8102.t1.exon2;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . CDS 30630 30784 . + 0 ID=cds.g8102.t1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . exon 30915 31122 . + . ID=g8102.t1.exon3;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . CDS 30915 31122 . + 1 ID=cds.g8102.t1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . exon 31348 39981 . + . ID=g8102.t1.exon4;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . CDS 31348 39981 . + 0 ID=cds.g8102.t1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . exon 40245 40769 . + . ID=g8102.t1.exon5;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . CDS 40245 40463 . + 0 ID=cds.g8102.t1;Parent=g8102.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 40464 40769 . + . ID=g8102.t1.utr3p1;Parent=g8102.t1 #PROT g8102.t1 g8102 MTNCSLHGYTNDRRPKDKTADRILGPGEAPVRLIPPTVEFFEVKAGETYESTVRLQNLSKTAKLVNYVQFESKSFTLVDAKALLLAPGMDVTLLVRYTPSQDEEDEYAVADINADNEIVALKCYAYVPTPRYVVPSDLHFGIVQKSNELICKPVEIRNVGTREGSFRIRWSPEAPLVITPSEAIIPPGDTVVVKIGLKTDRGGDFREEVSMDLEGLPSPQPILVTAVVAEEALQVYAADGRSLLSNVDFGTIFYGMDVSVDALVYNGCPLPVTFVVLETDDSIPVLSLPRGKATQDGGANYTSSPSSTAEGSPAISATPLEGHIPPYGTCPVRFKFSPRGVQEQKGWKHNRQHMPRRDFAMSMFIKAIGSKRRIEVPLKGSSVATDVRASSSLFDFNECVVHDHKDAVLTLTNGNEELPVSFKIARVAHFATLPRKGVLKPGEAANIVVTFVPRQIGSFETTVAIELNGGISTIPISVKGCAPLMGKRHVTEGGIAKTAVDFEHKLKIVDDESSANEHVISHEGLPRFNRYEESHDPELNLEVTWATPDRRARDEHRERYTEYMRSLTDDTQQQYAKREALDHVLYDNGVDIGIRPAAGLRSPMPSIKEAAKLPSPSRVVEASGSKKKAVQKTQQRGDVGRGAASSGASAGAAGAYGGSDLRGAGFARYKPKPTNAAEEDACSQVLSSHDLAKITAGTRSIDLGEVCIFAQAQRMFVVANGTDSPILVSLQSDQPELSQLAPRSQVVPAGAVAGFDVVFRADAQQKFAGTLTYWINGRHSYDVSVSAVVVSVSVELSKRSLVFRFTPEATEGFITEVVTLTNNRNSAADFSWSVQPGGQTTAHADFDLSQSRGAGAYSRMTGASPTMLTAAERSSVTTARSKTPGTAGSAFSVVPALGTIPPHGAVDCQFTYRPSYRAENEATFLLNVVGGKGNLLKCRGEVGQTRCSIADKRIDFGIVSVGSTLVRTATLRNNGQNDVYFTIREPNKVEGLTLEPNRGRIPVGAFAEVRVRLQLPHRRIFESEFVVSIRGGKDVVLTVSAMSDVPTVDVESVKEIDFGDVKLGSTVQMPVVLYNRGRISASLSIDLTDRPEFDLVAATHVIKPLPNSPGNTTVRPVVPTPTLASGEHWELVAMEAAESINDTHEGLAHSVSSREQVPSTRTPGPATPGDKHPSGHVAAHLGAPPIDRRTAEKSTKKDAKDARDASASLGASAGSSHKAKRVFAIDLESGQRGAFYLQYSPACTTSHRFGLNVDLLNVPGATILTCPVRANVVSSNVVVSTQRVAFGSTVLEGGHTQAVKKQLTLTNVGNLRVEYEFRAVGYVALEHGIFSVSPATGTMAPDESVTVEVTFIPDRVSEFFAKLPLYADGESEPCLMVDLDGAGIHATITFDRPELVLPVVPLNTVSEGVFYIANHGHRNLQLKHNLAAMGDRVPITLSFPEGDVLGTEAQLIPVRVVMKASHPVSFTVNLTFTDGRGHGHSIPITGVSDNSLLSLFPYLAIHGDAVQFHTDADGKISLIPSSPTETQLPSARARHPATQACAIVATDKFQRMSATVSKWLANFVFRNSRSLHIPQSFSCSRGRLLFEVLEYLSGQKVGELLPKSRNNGNNNNNNNNNSNTTNSNTNNNNTTNSSNIGAETGNGADDTLYHQFEAMLAFLRTYGAFLTHVRPEHLFDQDDYRHWARAKEAEKLYQLRHRPHTSHGHVPGQGHSGQNGAVGVGVGTGDGGEEGSKHAAASTHATPRAMLIAAEIEMRYHSLTAANFPAVSALAWTTLLSQIIKVFVVSRVTSRALRVMPLLPREIATAPSSLGTGNAGALPESIVLRWLTFHLRQKDADAIPIGDFAESFRDGRALASVLAAYAPYVGTQRLKALHSGPSLDVAQLATNALKVVGAMRDLCLEYHLGVADISDPDPLDMLLLSIYLFQVLPQYLPRGTIPFKGRLNDKIVQTVELSNPSSRPLVYVARIEGTGDFKPQQDSITVPAKGAASVGVEFVGRFSRPETATLIFVSRRSGKGSGNTLVFNLRSETSEVKPRGVVHCETPCYQMKTVLLQVTSPFPLDGEFQVQISTGAQQQQQQQQQQQQLSQSLQGGGSANTDRESGRPATFRRNASLRAIIPKTKTHPQAFVSCTDVVPLKAGETATVELQFFPFDIGRHTCHVLLIDERVGEFTYEIVGTSTLPAPLDVIQWSGLSRTSIDKTIALPLRNLEKERALVAILTDRQRNPTSGATPEVIAKQARALYDDLAEYPQQFTVEYTSPHYSGPQQVSLPAPSDATGAPSTPAQELQLPVKFAPRPTGRYSGRIILKSACDVRVYEIDTTIAATGMKAELEFAAPIRQSIVQQLPFSNPTENDLTIVAQVSGDGFYGPLSIVAKALTVTQYPLTFAPARLGSCEGAVVLNSQIPGLQHTYSLRATGQPPLPEDSLSVTCKAREDVSLSLRVPNYSQKGDVEYEIVCDIPNVRFPSSTIVVPYREDRTVVAVCSYRRSATYNGSIRFVARNEPHYLWYGVHVDVLPPEPEKTVEVVCQTRNVSAIPITVRNPLDTEATFSVTIRGGGGVVSAPNTVVVAAKSESVCNVQYAPVVAGVVDAMIGFFNDNAGEYWHRLSLSATSPAPVVLDPVECELGRSTMRTIVLENPLVEPLELSVHFSNTREFALSSAVSLTRGVILLEPRATREIDVTYTPSAVDFIQETEIVFSGAPIGEWVYRVGGKGVRPTTMEPTIIRGQLGERTSSLLALRNPFHSPIVVSVRLVSHHSTASLGSKAAPIDRQRDAFRLYVKNKGRVSIGGRATFTIPVSFSPSSMVEHRTSVVVTMENAGRDGLVWTFPLVGCPEVVAEGPPIVLECRARRRLDEGIDVVLKSPPLPAQLPPSMSASVANLHGDAAATDSAGGKADEISPPEPVFSENERLSFEIVRRLDDPNDDSVQSVLARAVAVTLQSTRIVDAFTAHLTMGIVFMPFRPFAASVDLVISKATGGTWRFPMHVVATEPRMDGVLQIESELNRHGVAHVTIASPQSYPVPFAASLSPESDAEFSLAPHRGDLQTTERGGTTFTVTYRPTSYGKRHTGRLIVQTDDMQWSYELRGTPPAYTPPVAKGGRLDNHINRRTSVQVHATTKKNYVRENIVVVQSLLNGGKKDHLRRLTA* # PASA_UPDATE: g8096.t1, single gene model update, valid-1, status:[pasa:asmbl_9774,status:3], valid-1 NODE_86_length_42249_cov_39.9329 . gene 7399 11265 . + . ID=g8096;Name=g8096.t1 NODE_86_length_42249_cov_39.9329 . mRNA 7399 11265 . + . ID=g8096.t1;Parent=g8096;Name=g8096.t1 NODE_86_length_42249_cov_39.9329 . five_prime_UTR 7399 7694 . + . ID=g8096.t1.utr5p1;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . exon 7399 8380 . + . ID=g8096.t1.exon1;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . CDS 7695 8380 . + 0 ID=cds.g8096.t1;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . exon 8968 9886 . + . ID=g8096.t1.exon2;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . CDS 8968 9886 . + 1 ID=cds.g8096.t1;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . exon 10112 11265 . + . ID=g8096.t1.exon3;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . CDS 10112 10903 . + 0 ID=cds.g8096.t1;Parent=g8096.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 10904 11265 . + . ID=g8096.t1.utr3p1;Parent=g8096.t1 #PROT g8096.t1 g8096 MEDTPGSPGRLKAADPGRQARLDRIRQSMDEFRRTTNEMSTPGLASTPTPVAARDGLLRANTIGHAASSGATPQRKTLDMAGMRMPGDVVGSSASYTISPAGTSSSAKQSAPSTPVKGSAQSSTASTPSVASMGAAPPYSMTPSASAPRISSPSKEKEGDKSKTKEKEKEKEREKSKKRGDAGKDKHGKGEDASAVRDPTLPQAPPDFGRVLSITGSLSGDFSTSPAESESSAGPSGAGVTRFVKTATVIRHHDKPKDKHPSAKLAVTMPTAPSGATSAPSAAAANTADSTSLPASPSKDINTPEGSPPDVPATVIPGIVGVPVNPVGAGDPLTPASIEKSAVAKFYLEQHFENVLKACTERIRRKEQLEAEMARMDLTVQQKDQLRAILRQKESEYIRLKRVKMDKSMFQAVKTIGVGAFGEVVLVRKADTQHLYAMKVLRKADVLRRNQIAHVKAERDILAEADNEWVVKLFYSFQDSEKLYFVMEYVPGGDMMTMLIRMGTFPEAMCRFYIAELTLAIDSVHKMGFSHRDIKPDNILIDKDGHIKLTDFGLSTGFRWTHDSQVYQELTQQQQQQQESLREELQRAQQNGTDPKEIRRLQRTMAHSLVGTPNYIAPEVLQGTGYNKACDWWSMGIIMFEMLFGHPPFFSQTPSETKRKVLNWKQHLRMPTDAGVSPAARDMVLNLCCGPEDRIGSKGAEEIKRHPFFAQINWAVNHRKQEAPYIPAIRYDGDTSNFDDIPSQPQGTGGAPNSAGHGPHAKHAFIEFTFRRFWNLTRRPSSSYSVERRKDNRKSAFF* # ORIGINAL: g8094.t1 original gene structure, not modified by PASA NODE_86_length_42249_cov_39.9329 AUGUSTUS gene 2577 3522 . + . ID=g8094;Name=g8094.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS mRNA 2577 3522 . + . ID=g8094.t1;Parent=g8094;Name=g8094.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 2577 2714 . + . ID=g8094.t1.exon1;Parent=g8094.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 2577 2714 . + 0 ID=cds.g8094.t1;Parent=g8094.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 2851 3522 . + . ID=g8094.t1.exon2;Parent=g8094.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 2851 3522 . + 0 ID=cds.g8094.t1;Parent=g8094.t1 #PROT g8094.t1 g8094 MASLTRYDWSHIIYVGINGLAHLSFVFDNIEDPSLDVGFRLALLVILGVATANIVSIFTTQRSRPAFQTVSFIVKYVNVLIAALLFYLALVGDFEKEPPGFAKWILSSRGVSRTFGLKDAPVGGYYFAVYVLIHFGLSTLHPRSLMVKLVNSRSEINRKDLAHAACDAAFAVVFLASIPYNLHFSPAVRLLFGGFAGANLGLVFAFARQPTEVVGIPQQLFHANVIFLSGCLLMGIIFSMAHVPSPGFKLTFAIVLGSLLLQRHYLSKR* # PASA_UPDATE: g8093.t1, single gene model update, valid-1, status:[pasa:asmbl_9770,status:3], valid-1 NODE_86_length_42249_cov_39.9329 . gene 154 2315 . - . ID=g8093;Name=g8093.t1 NODE_86_length_42249_cov_39.9329 . mRNA 154 2315 . - . ID=g8093.t1;Parent=g8093;Name=g8093.t1 NODE_86_length_42249_cov_39.9329 . five_prime_UTR 2148 2315 . - . ID=g8093.t1.utr5p1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . exon 1986 2315 . - . ID=g8093.t1.exon1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . CDS 1986 2147 . - 0 ID=cds.g8093.t1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . exon 1518 1643 . - . ID=g8093.t1.exon2;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . CDS 1518 1643 . - 0 ID=cds.g8093.t1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . exon 1004 1323 . - . ID=g8093.t1.exon3;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . CDS 1004 1323 . - 0 ID=cds.g8093.t1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . exon 154 672 . - . ID=g8093.t1.exon4;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . CDS 507 672 . - 1 ID=cds.g8093.t1;Parent=g8093.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 154 506 . - . ID=g8093.t1.utr3p1;Parent=g8093.t1 #PROT g8093.t1 g8093 MADQSIKKRKAEDDASEDASESHTNEGNEGAGSAAGLSKKDEMKKKLRDLRMRRTEAHSLNRSEVVEEDRRNKLPANWEAKQERAKWILEKEEAKRQAAEQGLEYDRVRNLQMTAEEAARRDRKKQSKTPWENGTIDFTQTHQRHYQRLTKELKPDLDTYKEHKDQLGERAYPSAQDLDYGLDASAKIAPGAADRLAQAVEKHIEKRARHSRRRAFDEDDDIDYINENNMRYNKMVHKFYGKYTAGIKQDLERGTAL* # PASA_UPDATE: g8095.t1, single gene model update, valid-1, status:[pasa:asmbl_9771,status:3], valid-1 NODE_86_length_42249_cov_39.9329 . gene 3706 6491 . - . ID=g8095;Name=g8095.t1 NODE_86_length_42249_cov_39.9329 . mRNA 3706 6491 . - . ID=g8095.t1;Parent=g8095;Name=g8095.t1 NODE_86_length_42249_cov_39.9329 . five_prime_UTR 6444 6491 . - . ID=g8095.t1.utr5p1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . exon 6430 6491 . - . ID=g8095.t1.exon1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . CDS 6430 6443 . - 0 ID=cds.g8095.t1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . exon 5565 5664 . - . ID=g8095.t1.exon2;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . CDS 5565 5664 . - 1 ID=cds.g8095.t1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . exon 5019 5185 . - . ID=g8095.t1.exon3;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . CDS 5019 5185 . - 0 ID=cds.g8095.t1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . exon 4455 4592 . - . ID=g8095.t1.exon4;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . CDS 4455 4592 . - 1 ID=cds.g8095.t1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . exon 3706 4264 . - . ID=g8095.t1.exon5;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . CDS 3946 4264 . - 1 ID=cds.g8095.t1;Parent=g8095.t1 NODE_86_length_42249_cov_39.9329 . three_prime_UTR 3706 3945 . - . ID=g8095.t1.utr3p1;Parent=g8095.t1 #PROT g8095.t1 g8095 MAEETKKVVGVPETLLKKRKTLEKVTAERAQRAVALRKKRTVQRRVVFKRAEQYAKEYQQAEKDQVRLRRQAKANGNFYVAPEAKLAFVVRIRGINGVHPKVRKILQLLRLLQIHNGVFVRLNKSTINMLRIAEPYLAYGYPNLKSVKELVYKRGFGKVNKQRIPISDNAIVEQSLGKHGLICVEDLVHEIYTVGPHFKEATNFLWPFKLSSPNGGLKKKANHFIEGGDYGNREDKINDLIRSMN* # ORIGINAL: g8098.t1 original gene structure, not modified by PASA NODE_86_length_42249_cov_39.9329 AUGUSTUS gene 15582 19268 . + . ID=g8098;Name=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS mRNA 15582 19268 . + . ID=g8098.t1;Parent=g8098;Name=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 15582 15720 . + . ID=g8098.t1.exon1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 15582 15720 . + 0 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 16117 16268 . + . ID=g8098.t1.exon2;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 16117 16268 . + 2 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 16542 16645 . + . ID=g8098.t1.exon3;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 16542 16645 . + 0 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 16802 16955 . + . ID=g8098.t1.exon4;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 16802 16955 . + 1 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 17164 17316 . + . ID=g8098.t1.exon5;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 17164 17316 . + 0 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 17514 17590 . + . ID=g8098.t1.exon6;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 17514 17590 . + 0 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 17855 17940 . + . ID=g8098.t1.exon7;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 17855 17940 . + 1 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 18225 18340 . + . ID=g8098.t1.exon8;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 18225 18340 . + 2 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 18731 18818 . + . ID=g8098.t1.exon9;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 18731 18818 . + 0 ID=cds.g8098.t1;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 19156 19268 . + . ID=g8098.t1.exon10;Parent=g8098.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 19156 19268 . + 2 ID=cds.g8098.t1;Parent=g8098.t1 #PROT g8098.t1 g8098 MSAVQNALNAIAGVANQKDKLTQYKAVVDGLVQGGSLDDWRLFIDTMAHESTTLVISRQILSELAAVLPQLSAEAAKEISNYALRKLNTRIVSFEEQISVIRQHLATVLENEENWSESARVLIGIPLDSGHRTVSAEYKLEIFIKIAQLYLEDDDPVQAEAYINRASVLQSDKINRLLQLKYKVCYARILDFKRKFMEAAQRYFELSYLVGDEERIVSLTCALNCAVLAPAGPQRSRLLATLYKDERCQGLPAYPVLRSMYLDRIIRRQLVDDFATTLVPHQLAITADGSTILERAVIEHNLLSASRLYTSITFAELGSLLEIRAEKAEKIASQMIAEGRMSGSVDQIDCLILFESANKALPAMDAQVRDICLQVNSIIEQISQAHPELAAGV* # ORIGINAL: g8100.t1 original gene structure, not modified by PASA NODE_86_length_42249_cov_39.9329 AUGUSTUS gene 24270 26812 . + . ID=g8100;Name=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS mRNA 24270 26812 . + . ID=g8100.t1;Parent=g8100;Name=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 24270 24315 . + . ID=g8100.t1.exon1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 24270 24315 . + 0 ID=cds.g8100.t1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 24459 24550 . + . ID=g8100.t1.exon2;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 24459 24550 . + 2 ID=cds.g8100.t1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 24879 25002 . + . ID=g8100.t1.exon3;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 24879 25002 . + 0 ID=cds.g8100.t1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 25425 25843 . + . ID=g8100.t1.exon4;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 25425 25843 . + 2 ID=cds.g8100.t1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 26162 26355 . + . ID=g8100.t1.exon5;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 26162 26355 . + 0 ID=cds.g8100.t1;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 26716 26812 . + . ID=g8100.t1.exon6;Parent=g8100.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 26716 26812 . + 1 ID=cds.g8100.t1;Parent=g8100.t1 #PROT g8100.t1 g8100 MASLDRARVLVLGDSGVGKTSFVHVLCHKEVLKGPSWTVGCSVDVKLHDYPSISTTQTQKTYCIELLDVGGSAKYRKTRNIFYGSINGIILVHDLTNRKSCTNLRKWLDELYAFLDSPQQQQPSVVTFHPSVSAVASSPARDASPSSYALGGGLLSRGERRLSVGNACTDGQFSLSAYEGGGGGSDRGIPVVVIGTKADLVASSGDLGRTFKRSAVADETGADSLSVSNLLPTELAPNTANGQRLGMFFDRVIERKGGSVAWGTIGGGGGLQGTPARKKLTSGVALATAGKSGSEENLLTASPKMRRNGSGLAISMDTSLKFA* # ORIGINAL: g8097.t1 original gene structure, not modified by PASA NODE_86_length_42249_cov_39.9329 AUGUSTUS gene 11787 14972 . - . ID=g8097;Name=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS mRNA 11787 14972 . - . ID=g8097.t1;Parent=g8097;Name=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 14808 14972 . - . ID=g8097.t1.exon1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 14808 14972 . - 0 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 14426 14557 . - . ID=g8097.t1.exon2;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 14426 14557 . - 0 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 13958 14029 . - . ID=g8097.t1.exon3;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 13958 14029 . - 0 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 13590 13758 . - . ID=g8097.t1.exon4;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 13590 13758 . - 0 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 13150 13279 . - . ID=g8097.t1.exon5;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 13150 13279 . - 2 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 12756 12907 . - . ID=g8097.t1.exon6;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 12756 12907 . - 1 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 12276 12369 . - . ID=g8097.t1.exon7;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 12276 12369 . - 2 ID=cds.g8097.t1;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS exon 11787 11961 . - . ID=g8097.t1.exon8;Parent=g8097.t1 NODE_86_length_42249_cov_39.9329 AUGUSTUS CDS 11787 11961 . - 1 ID=cds.g8097.t1;Parent=g8097.t1 #PROT g8097.t1 g8097 MVASASTFVTYADHKLSSVSICPHVAQDGRPSTFVTGGWDSVRVESQWQSSDRAWASPLCVWKFAEDLSMIVDSAAPDAFREPEVIARADISGSITAVKFLDARRILASNSKGAVHLYDYSDVKGTLQSRQVWSSLHTIGGASVPCTSFAADGQRVATAGEDGRIVLLNMDSPNPALSIASDSATIKGIAFLRRDAVITAGYNGRIKVWDFGNAKAPAAILHNPETSAEITCLAVHPHQPAYIAAGDADGALTVWDVRQPKYAVCSFVAHSDDVLSVCFHPSVPQHVFTTGVDGKLAHWDFNPTRDRNRTAFVASPTTESDPMCSIVSRTPMPVNSCDAADSLVVCVTDSESVCTTTNLVRI* # ORIGINAL: g5749.t1 original gene structure, not modified by PASA NODE_3516_length_3286_cov_49.2267 AUGUSTUS gene 1 901 . - . ID=g5749;Name=g5749.t1 NODE_3516_length_3286_cov_49.2267 AUGUSTUS mRNA 1 901 . - . ID=g5749.t1;Parent=g5749;Name=g5749.t1 NODE_3516_length_3286_cov_49.2267 AUGUSTUS exon 1 901 . - . ID=g5749.t1.exon1;Parent=g5749.t1 NODE_3516_length_3286_cov_49.2267 AUGUSTUS CDS 1 901 . - 0 ID=cds.g5749.t1;Parent=g5749.t1 #PROT g5749.t1 g5749 MYNRMYIEDAQFRDEVKTTIPVGRLVLVSFDQNLQDLSAFEGVHAALLNIPKQGSGRYTTCSAADLTPLNNVHTVEIRLDWDLSDDSLAPLANARIVRLKESRVPTFAKAESVYLHDASVDVNRLAGIPRVCLVCCKTEQGAPITNLSALRRARFVEINQGGGYRKTGELEDLSCLESAREVVIKNCEITILPPTTHLRAFTWHGSTLKSIPPELGGMRFLDLSGSSNLEDVSAACTVSELVLLQCFRVRDVSALGSVHTLRLSDCGTSLDVSALGSVHTLDFDNVYLKGVSRLGNVHRL # PASA_UPDATE: g5750.t1, single gene model update, valid-1, status:[pasa:asmbl_6169,status:12], valid-1 NODE_3516_length_3286_cov_49.2267 . gene 1729 3216 . + . ID=g5750;Name=g5750.t1 NODE_3516_length_3286_cov_49.2267 . mRNA 1729 3216 . + . ID=g5750.t1;Parent=g5750;Name=g5750.t1 NODE_3516_length_3286_cov_49.2267 . five_prime_UTR 1729 2208 . + . ID=g5750.t1.utr5p1;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . exon 1729 2311 . + . ID=g5750.t1.exon1;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . CDS 2209 2311 . + 0 ID=cds.g5750.t1;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . exon 2581 2633 . + . ID=g5750.t1.exon2;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . CDS 2581 2633 . + 2 ID=cds.g5750.t1;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . exon 2897 3216 . + . ID=g5750.t1.exon3;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . CDS 2897 3139 . + 0 ID=cds.g5750.t1;Parent=g5750.t1 NODE_3516_length_3286_cov_49.2267 . three_prime_UTR 3140 3216 . + . ID=g5750.t1.utr3p1;Parent=g5750.t1 #PROT g5750.t1 g5750 MSETANSGEATPDAPEDFESGNASNDEIDALEETDGIGSFPVHRPSRADMRQLFSRKMSFSPQEIRVLLVDADGPQRKTCAQYLRRAGYEGESVRETFSTKKCLRPGPIDSNIAHRRLQSILRWLERVCVCV* # PASA_UPDATE: g4849.t1, single gene model update, valid-1, status:[pasa:asmbl_9208,status:12], valid-1 NODE_754_length_18099_cov_41.8364 . gene 4910 12675 . + . ID=g4849;Name=g4849.t1 NODE_754_length_18099_cov_41.8364 . mRNA 4910 12675 . + . ID=g4849.t1;Parent=g4849;Name=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 4910 6461 . + . ID=g4849.t1.exon1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 4910 6461 . + 0 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 6691 7028 . + . ID=g4849.t1.exon2;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 6691 7028 . + 2 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 7147 7329 . + . ID=g4849.t1.exon3;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 7147 7329 . + 0 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 7513 7718 . + . ID=g4849.t1.exon4;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 7513 7718 . + 0 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 7972 8052 . + . ID=g4849.t1.exon5;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 7972 8052 . + 1 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 8330 8423 . + . ID=g4849.t1.exon6;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 8330 8423 . + 1 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 8663 8841 . + . ID=g4849.t1.exon7;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 8663 8841 . + 0 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . exon 9081 12675 . + . ID=g4849.t1.exon8;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . CDS 9081 12582 . + 1 ID=cds.g4849.t1;Parent=g4849.t1 NODE_754_length_18099_cov_41.8364 . three_prime_UTR 12583 12675 . + . ID=g4849.t1.utr3p1;Parent=g4849.t1 #PROT g4849.t1 g4849 MSYDGRSGGQQPPYEYGGWANRRRDERDGPRDAPPPRYHRASLLPTFSPLERADGRLPLDRSDRNDRPDRPDRFGDRTAGGAPVPADRDRDRDRERDRDWPRREGSSLSGWGPAWKRAPKGVADGGSGGGGSVGGVPPLGGSSGGYDRFRDVDFSRGPAYRDYAPFAPPGTAGAGALFRSPRSPPRGVRDRSWSNDRDREMHPPPPLSWEEREREREVRDIRDREREVRDRERERGERPDRPDRPIVRDGRDSRDAREDPAPFDWERRSLHRASFDRDFDAIPPRFGYRFRSPNRSPSPQPPPPPPSSTFAGRDERDAPSDAVPRRPSIMRDMRDRDRLGADWGGMQRHREEAAARAWVDRAPFIAESSPTPGGWRGAGGASTAPGSGVGEGDTSDREKLPPPLLQPPSLVRTASTLSSQGSGHKRPREEDASPEPVPHGNGGGGSERDRGSSSPRDRDRDDVKRPRLDSSSSMPPQHTAQVPVYARHLPSADGAHVTHSAVEQGVVARDERVVLIEEAHSSKELPTTPRDHNDGDVRGASVGKEVKAESTAEDSVPTDVSVRESGHAGGAVHGAAPASPTATPTAAVAVAAVVPQSPARSKESLLARIEKVDMEILQVEHRLSVLKEQKRAAETVTEQAPVVKMETGKPVTAVEQVLADNRAKAVAAHRMCVAPRLPPAMLDGNGCPVVRVFYQQPCDIPTYFDTIQENDDIRPRLMAFLHEQRVHLRAKEMQLSTDFDQTMATWKKRVQKLEDANNRKGRTEKFRDYFESQFPEMYKKEEVRTGSTRPGRAGWGDAARSDADFDRIVMDLLRQDRENDDRYMKTLAVVSPMVLDDKEKAVRFFSANGFVDDPMEIERNRRFVNPWTEKERRIFTEKFLQFPKYFCKIASYLPNKSTSDCVQHYYHSKKKENYKRLLKQSANMRRKAGASAQQQQQQQQQQQQQQQQQQQHQQQQQREHMLEYDAHTLGNAEGQQPAPRRREGDEARRRQRELREQQRQQQQQLQQQQQQQLQLQLQQQQQLQQQQQQQQQMQQQQQSLQQQHQVQQQQQQHYQLPHELQQSAASSEAALRAEGKQVYAGVDRDDDSAHGEKPFAADDGGASSAGAAGGPDAAGDKPVKEKRVVTYWTSKEKDDFMRYFQQYGKDWARLAESIGTKSQAQIKNYFQNYKVRLNLNGILEESPHLQSHGRARRTRDKQAASASGITKEESVDNSETVAMDVVDVEQQLQSPSFVDVGGSGSGPAYSAMHHGDAITTTPAIAAVDVRRVEAVAPQHVTTAALANDNGLAHHAHMAAPTPDGMSPVVHVTTPALTAAPGGEMHSEAHALAVTGGAVVSAEPDSASAETHAVPPDVATTHTQTPDDTVMRHADAQPGMEDDIAMATACASSDAVLSVPEAATEMSRLHGDAGAAMSAGTPNNVTNLATTVAVESESALTEASHVAPSNVAVSDGVYVDADARSAHLDTAPLDTAAHSSTLADIFVDTANTTSNVAVPEDTVQSVESTGPAPEVEAVVASALGSTNVEGVSDRHAQQPLSAPADVGVGDECVGGYVLANDSAVSTNASHDGSTTHPMYPVHVEEDGPNDGASLEGRSGPDSHAHAVRLGDDVPVTADSAPVVEARDVPLGDAPFGQSSDAHDARFADDAPVGQSADTAQVEQSANGTHLQDSSQNDGVHALNDAPVGDQCVEVSSSAAKVDDALVGDNSVEVSNSAAEMDGAPAGDNSVAVAHSAAEMDDAHVGDNSVAASNSAAEMGESHDAPAADSATDSGAGIGVVDVADAAMGEAESDGHSTAPLVPSATAHAVHHVTGVAVPQTEMDEPWQAAADDAHAPAVTVEPLTGAGDGVPEPTDALAVEQHETHFASEGNSQGTGGGTVDPTPAVFVTPSAPEVSAELTAVASLAPDASPGVTTAARDSEPNAVRDVVMDETENMHESNASDSRAHSASHDLAVPPVDDAFAIPATIGHRASEVTVTTTDHSALASRVENDDGVSPIPMEIDGPAYAIHDSNALSNAGASAPADGMASAAHMLHSREDGEVSDGENAE* # PASA_UPDATE: g4848.t1, single gene model update, valid-1, status:[pasa:asmbl_9209,status:12], valid-1 NODE_754_length_18099_cov_41.8364 . gene 3017 4358 . - . ID=g4848;Name=g4848.t1 NODE_754_length_18099_cov_41.8364 . mRNA 3017 4358 . - . ID=g4848.t1;Parent=g4848;Name=g4848.t1 NODE_754_length_18099_cov_41.8364 . five_prime_UTR 4289 4358 . - . ID=g4848.t1.utr5p1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . exon 4253 4358 . - . ID=g4848.t1.exon1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . CDS 4253 4288 . - 0 ID=cds.g4848.t1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . exon 3966 4075 . - . ID=g4848.t1.exon2;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . CDS 3966 4075 . - 0 ID=cds.g4848.t1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . exon 3706 3855 . - . ID=g4848.t1.exon3;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . CDS 3706 3855 . - 1 ID=cds.g4848.t1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . exon 3400 3519 . - . ID=g4848.t1.exon4;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . CDS 3400 3519 . - 1 ID=cds.g4848.t1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . exon 3017 3150 . - . ID=g4848.t1.exon5;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . CDS 3042 3150 . - 1 ID=cds.g4848.t1;Parent=g4848.t1 NODE_754_length_18099_cov_41.8364 . three_prime_UTR 3017 3041 . - . ID=g4848.t1.utr3p1;Parent=g4848.t1 #PROT g4848.t1 g4848 MFDDLQRMNKRQVAFQVLNFVMIISSALMMWKGLMVWTNSESPIVVVLSGSMEPAFYRGDLLFLTNHYEEPIRVGEVIVFKIKDRDIPIVHRVMKVHEGPDGAVKFLTKGDNNYVDDRGLYAPGQMWLQRDDVVGRARGFVPYVGQVTILMNTYPQLKFVLLGVLGLFVLLHRE* # ORIGINAL: g4850.t1 original gene structure, not modified by PASA NODE_754_length_18099_cov_41.8364 AUGUSTUS gene 13400 17600 . + . ID=g4850;Name=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS mRNA 13400 17600 . + . ID=g4850.t1;Parent=g4850;Name=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 13400 13787 . + . ID=g4850.t1.exon1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 13400 13787 . + 0 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 14026 14212 . + . ID=g4850.t1.exon2;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 14026 14212 . + 2 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 14456 14583 . + . ID=g4850.t1.exon3;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 14456 14583 . + 1 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 14884 15208 . + . ID=g4850.t1.exon4;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 14884 15208 . + 2 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 15383 15621 . + . ID=g4850.t1.exon5;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 15383 15621 . + 1 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 15817 16048 . + . ID=g4850.t1.exon6;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 15817 16048 . + 2 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 16273 16589 . + . ID=g4850.t1.exon7;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 16273 16589 . + 1 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 16919 17039 . + . ID=g4850.t1.exon8;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 16919 17039 . + 2 ID=cds.g4850.t1;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 17477 17600 . + . ID=g4850.t1.exon9;Parent=g4850.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 17477 17600 . + 1 ID=cds.g4850.t1;Parent=g4850.t1 #PROT g4850.t1 g4850 MSSWDVNNTETAVQRDIIRMAIDEVKNRTTPTARTFNNTFDIEMRFRGRAPSERVGGRRVAIAEAIKLIDEDNIAVLVGSSFSFESMVVNLYISIFGVPQISSYSTSPALSDDSEYDGFMRTCAPDIAQGAALVVLLEKFHWDTVTVISGVDEYAIGLAQEFANECAKHNVSVLATFSFDVQSADSINGAIESLKKIGSRVILLSALDLDSALLLLAAYDGGITGPGYTWIGTDGVELILSSQYPQSKRPQLLRALEGMILTVPFTGVGTAAYDQFVARMAAQKRVNPALHPSLNLTDMSVSSSYIGLTYEAAYVCMIAADQLISRGLDPYVNRTEYFAQMNKVRFEGPTGTTVFLPNGDRSASYGINNFVDGAFRYGVGKYFAGTWEISTPIRWADKTIVPPSDAVCVPTCVQGVCTKVSRGVGFCKCPEGWSGLRCNEEQSSGAPKYAIPLAVSFGVAASVIGIGAFVFVRRKRFILRKEKIHVIDFAELEVMELIGSGGFGDVYKARFRGTFVAVKRIFPERLRPDHMASVEPRDERPSQADACAGVVRGNGQHKQRNVIAEEGNHSGGSARGAAAQPSPRTGDYSATVTHVLSTISRSQRKGGVLANFKEAYRNWNANENDLSKADVERIECFHAEIEVMCSLRHPNVVLFMGSCEMREYQFMRFVCNILYQSIVGFQRIYF* # ORIGINAL: g4847.t1 original gene structure, not modified by PASA NODE_754_length_18099_cov_41.8364 AUGUSTUS gene 152 748 . - . ID=g4847;Name=g4847.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS mRNA 152 748 . - . ID=g4847.t1;Parent=g4847;Name=g4847.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS exon 152 748 . - . ID=g4847.t1.exon1;Parent=g4847.t1 NODE_754_length_18099_cov_41.8364 AUGUSTUS CDS 152 748 . - 0 ID=cds.g4847.t1;Parent=g4847.t1 #PROT g4847.t1 g4847 MGAVPMDSTKNALAPSCGKPATTPAGCNRKTSTTGILAEFGAPTFGERMIKRQFRFASKLKAMNLKRLTFIACSRPVCVAWKWGEVKKMEPSFPLGITMQADFLAFQKEVQVAHNLRTPADKVLRTAMMRTMPTRAPKDIDTMSSLRFLKTPVLGAKHDSAGEPKPYLSVAPAFASAMLFKHVCARSRYIATYRSRTT* # ORIGINAL: g5431.t1 original gene structure, not modified by PASA NODE_3141_length_4219_cov_40.7753 AUGUSTUS gene 102 2779 . - . ID=g5431;Name=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS mRNA 102 2779 . - . ID=g5431.t1;Parent=g5431;Name=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 2730 2779 . - . ID=g5431.t1.exon1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 2730 2779 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 2603 2646 . - . ID=g5431.t1.exon2;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 2603 2646 . - 1 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 2409 2503 . - . ID=g5431.t1.exon3;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 2409 2503 . - 2 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 2241 2292 . - . ID=g5431.t1.exon4;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 2241 2292 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 2084 2148 . - . ID=g5431.t1.exon5;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 2084 2148 . - 2 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 1841 1968 . - . ID=g5431.t1.exon6;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 1841 1968 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 1583 1740 . - . ID=g5431.t1.exon7;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 1583 1740 . - 1 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 1268 1428 . - . ID=g5431.t1.exon8;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 1268 1428 . - 2 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 804 890 . - . ID=g5431.t1.exon9;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 804 890 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 595 693 . - . ID=g5431.t1.exon10;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 595 693 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 378 458 . - . ID=g5431.t1.exon11;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 378 458 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 102 280 . - . ID=g5431.t1.exon12;Parent=g5431.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 102 280 . - 0 ID=cds.g5431.t1;Parent=g5431.t1 #PROT g5431.t1 g5431 MAPSLDVRNWLGKGRSIADIINANAASNDRRALVRTVYEVCSHVAKGDLGASAAAAALLGADVQPRDLVASALTDIFSFEDADEDRDKAARTHLNALVQDCLKVHPDLATMLKERLEAAVLESLGVIRDQKLFAQSVVKTKTRLFYKQQKFNLLREESEGYSKLLVDLQQAAASFDGQQTSLGEASRSALAQIMSLIGYFDLDPNRVLDLVLDVFEMNVDKFPLFIALLETYRAREAALTNILGFKFQSHQRDSVPEQLYRVAALLIKEKVVRLEDLLVHLSPSVPDCLADWKQQMQEAQDAAKKMGMVNLASADTDEKTKDEAEKEKAKEKEKETTEAESKVSANQRIGLCSALLTVQDWTHAEALMATMPSYFASQHALIAPKIAKLLHFILEPIYK # ORIGINAL: g5432.t1 original gene structure, not modified by PASA NODE_3141_length_4219_cov_40.7753 AUGUSTUS gene 3797 4219 . + . ID=g5432;Name=g5432.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS mRNA 3797 4219 . + . ID=g5432.t1;Parent=g5432;Name=g5432.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS exon 3797 4219 . + . ID=g5432.t1.exon1;Parent=g5432.t1 NODE_3141_length_4219_cov_40.7753 AUGUSTUS CDS 3797 4219 . + 0 ID=cds.g5432.t1;Parent=g5432.t1 #PROT g5432.t1 g5432 MMAGGDGGGGGGGGGGGSGRSRTTNAGVDPFAAFTDFQNILPPSRTPIPQPDTSQPQQGTKGSTRQRPSAGGRASATTVANAVGGGQAQAGQQFNLLAQQHHQQQQRLLAQQQLLLQLVGKTPGADLGALGLAALGGLGGM # ORIGINAL: g2803.t1 original gene structure, not modified by PASA NODE_5969_length_669_cov_25.2239_potentialcontaminant AUGUSTUS gene 1 669 . - . ID=g2803;Name=g2803.t1 NODE_5969_length_669_cov_25.2239_potentialcontaminant AUGUSTUS mRNA 1 669 . - . ID=g2803.t1;Parent=g2803;Name=g2803.t1 NODE_5969_length_669_cov_25.2239_potentialcontaminant AUGUSTUS exon 1 669 . - . ID=g2803.t1.exon1;Parent=g2803.t1 NODE_5969_length_669_cov_25.2239_potentialcontaminant AUGUSTUS CDS 1 669 . - 2 ID=cds.g2803.t1;Parent=g2803.t1 #PROT g2803.t1 g2803 DCPRIVTLPPATYLRAFTWHRSPLKAIPPELGGLRFLDLSSSRDLEDVSAGGNVHELILRHCSSLKDVSALGSVHTLRIKSAGGVLDVSALCRVHTLEFECVRLEGVSKLTGVHYLSLFSVEFNVQELSQLGTVHTLSLPLVDIEDVSTLGGVHTLLFERNERIMDVSALGNCHRVELIGCLVSDVSMLGRVHTLNLQSTNVSDVSMLGNVHTLNLRGCKKV # PASA_UPDATE: g11036.t1, single gene model update, valid-1, status:[pasa:asmbl_7232,status:12],[pasa:asmbl_7233,status:12],[pasa:asmbl_7234,status:12], valid-1 NODE_433_length_23831_cov_39.9841 . gene 16445 23805 . - . ID=g11036;Name=g11036.t1 NODE_433_length_23831_cov_39.9841 . mRNA 16445 23805 . - . ID=g11036.t1;Parent=g11036;Name=g11036.t1 NODE_433_length_23831_cov_39.9841 . five_prime_UTR 23730 23805 . - . ID=g11036.t1.utr5p1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . five_prime_UTR 23414 23590 . - . ID=g11036.t1.utr5p2;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 23730 23805 . - . ID=g11036.t1.exon1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 23399 23590 . - . ID=g11036.t1.exon2;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 23399 23413 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 22884 23200 . - . ID=g11036.t1.exon3;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 22884 23200 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 22587 22743 . - . ID=g11036.t1.exon4;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 22587 22743 . - 1 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 22178 22303 . - . ID=g11036.t1.exon5;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 22178 22303 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 21642 21863 . - . ID=g11036.t1.exon6;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 21642 21863 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 20209 21495 . - . ID=g11036.t1.exon7;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 20209 21495 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 18528 20028 . - . ID=g11036.t1.exon8;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 18528 20028 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 18171 18343 . - . ID=g11036.t1.exon9;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 18171 18343 . - 2 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 17918 18045 . - . ID=g11036.t1.exon10;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 17918 18045 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 17470 17728 . - . ID=g11036.t1.exon11;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 17470 17728 . - 1 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 17192 17311 . - . ID=g11036.t1.exon12;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 17192 17311 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . exon 16445 16969 . - . ID=g11036.t1.exon13;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . CDS 16775 16969 . - 0 ID=cds.g11036.t1;Parent=g11036.t1 NODE_433_length_23831_cov_39.9841 . three_prime_UTR 16445 16774 . - . ID=g11036.t1.utr3p1;Parent=g11036.t1 #PROT g11036.t1 g11036 MYTIVGFLDKNKDAQQDLLFDMMKSSGDAFVKEVQKFRDIAAGAGAEAAAAASKDSKGKGKPTIGSIFKEQLNSLVAVLSQTTPFYVRCIKPNSDKVAAKFDKQMVMDQLRYSGMLDIIRIRKIGFPVKIKSGDFLQKYRCLAPKDLAVDKDNEPAACKAIMMLLKLPPTEWQVGRTKLFFRQRVFDPLEDMRRKLLADMSARIQAYWRMILQRRKYLKLRKATMFIQRGFRRHMDRLRYKKKRRAIVVIQAYYRGMMARDLYRFMKKEKADKERKEKEALESEDARQKAKMINEMKEAAETTDKRRASVLRLETEGPEGERLMKEEAKKEEAKEEKEKQQKKNNDRAARRATKVFNKPIKELKDEPGGDPTLVVFAEKYCQLHPKSNTSTFFRARTSTKSGTMSGTQSGTKVDMFSFEEMCQYQKTASIPTSFTIMEDQNDITLAISMFKELGKFYKSEFKAGLPEWLMIRHTIEWAIEKPDLRDELYFQLFKQTCHNPKPERASRAWLFMSYVACCCPPSNSLFKHLLAYVNDVCDGKIAVADDTKERVLYCRRMIKQVKVNGSRKYPPSNAEFCAIRAMIDPRLIVNLLDGSKEEVPVDPSMSTTDCVAMLAKKLGLESADGWALYEQSGTGIERAVRGVEYVMDIVSEWENAKRQSVLAAYRENDVPLPIGAADDARFIFKKRLFRNPRELPADPVAYQLIYCQAVQSVVRGDLPLMLDIILKLAGLQMQATYGEFQTADAKYEQLEMFLPSRTIDNQQLETKRTREEWTKELADAHRMFGGNRSELESQFDYMNTVKNCQMYGFTLYPVEYRGFWSHPSKILIAIGEEGFKFLNVKTKAVLAEYTYARLESVATDGKEKTLSLNLKESTNAEEQRFFVFVTEQRDDAASLIGSYSPSHRAKKEETKTVTKDVAKVDHAGANNDVEQAREKLVASGRLAKPPKVVQQQTGLLGALGGTLKKLRRSGSAAKVLESAASGDPDFTKPYWSFSKVLPTQALTVVDGESNELAVKSFMTLFIFQGLAQTGGFETEGDTDHVAMLQTMIANMITHTPLCDEVFLQMIKQTTDAPPKNRHSIAAWKFFAVVASVIAPRNEHILEYARAHLHRCSLDGNTEEGQYAAFARKALARAAKRNDRKYPPSSEEILYLSNRKPIQTRFFFLDGQYRALVFDSSSTAGEVIDLLKERLGLSKTTEGFAIFEVLGSLERCMLESDNVADAIFKWEKYAQSTKSTLSLRLTFKRNISFGAYVAPTNPVEFNLNFHQVVDSVANDRYPVTLTEAIQLAALRAQVEMGDFDMGKMGQGRYKGIIDKYVPKPFRTHSTIGDSIAGAHERLKGKIEHDCNTEYMSIVTKWEYYGTTIFEVQQSYTTDMPQLLWFGVSEKGIHIFKPGEKEPIVSYGYEAIINYSPSVRNLMILTDSLSRGTKYVFNTSQASRIAYLIRDYAHLVYERTAGKSGAQPPPGPGVGGDSSARRTSVAKKKTSGAGPPPPPVMTIDE* # ORIGINAL: g11030.t1 original gene structure, not modified by PASA NODE_433_length_23831_cov_39.9841 AUGUSTUS gene 46 764 . - . ID=g11030;Name=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS mRNA 46 764 . - . ID=g11030.t1;Parent=g11030;Name=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 682 764 . - . ID=g11030.t1.exon1;Parent=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 682 764 . - 0 ID=cds.g11030.t1;Parent=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 412 559 . - . ID=g11030.t1.exon2;Parent=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 412 559 . - 1 ID=cds.g11030.t1;Parent=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 46 171 . - . ID=g11030.t1.exon3;Parent=g11030.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 46 171 . - 0 ID=cds.g11030.t1;Parent=g11030.t1 #PROT g11030.t1 g11030 MSRRDRAEASALLRSLVEDNVDVNSMMSRATTPDYPRLSPSREFVLGTYNSLLDENLAAKQYFSKPSRWRQLKRAGLINGRGEMVDERYRSMIFKLQEENARDQQEWISTILKEALELE # PASA_UPDATE: g11033.t1, single gene model update, valid-1, status:[pasa:asmbl_7231,status:12], valid-1 NODE_433_length_23831_cov_39.9841 . gene 8318 10494 . - . ID=g11033;Name=g11033.t1 NODE_433_length_23831_cov_39.9841 . mRNA 8318 10494 . - . ID=g11033.t1;Parent=g11033;Name=g11033.t1 NODE_433_length_23831_cov_39.9841 . five_prime_UTR 10443 10494 . - . ID=g11033.t1.utr5p1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 10341 10494 . - . ID=g11033.t1.exon1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 10341 10442 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 9872 10030 . - . ID=g11033.t1.exon2;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 9872 10030 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 9590 9652 . - . ID=g11033.t1.exon3;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 9590 9652 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 9275 9382 . - . ID=g11033.t1.exon4;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 9275 9382 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 8943 9020 . - . ID=g11033.t1.exon5;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 8943 9020 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 8628 8725 . - . ID=g11033.t1.exon6;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 8628 8725 . - 0 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . exon 8318 8467 . - . ID=g11033.t1.exon7;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . CDS 8413 8467 . - 1 ID=cds.g11033.t1;Parent=g11033.t1 NODE_433_length_23831_cov_39.9841 . three_prime_UTR 8318 8412 . - . ID=g11033.t1.utr3p1;Parent=g11033.t1 #PROT g11033.t1 g11033 MAEPLPKWTDAELATDAVTKKDIVQFVQESASQKFLADRKLKGKLESIAKATKKDDAIAAYKAMFESKAFKGDEADEAPATAAAVPKEESAAVNEVAEKVEKVAIADEKPRFTKTVLKKGNGTTFPRKGDLVSCWYTGTLDDGKVFDSNVGGKKKTPLKFKVGKGLVIRGWDEGLLTMSKGEKAKLVIESDWAYAKKGVPDAGIPPNARLTFEVELVDVE* # PASA_UPDATE: g11034.t1, single gene model update, valid-1, status:[pasa:asmbl_7237,status:12], valid-1 NODE_433_length_23831_cov_39.9841 . gene 10791 13834 . + . ID=g11034;Name=g11034.t1 NODE_433_length_23831_cov_39.9841 . mRNA 10791 13834 . + . ID=g11034.t1;Parent=g11034;Name=g11034.t1 NODE_433_length_23831_cov_39.9841 . five_prime_UTR 10791 10855 . + . ID=g11034.t1.utr5p1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 10791 11343 . + . ID=g11034.t1.exon1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 10856 11343 . + 0 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 11548 11656 . + . ID=g11034.t1.exon2;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 11548 11656 . + 1 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 11880 12035 . + . ID=g11034.t1.exon3;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 11880 12035 . + 0 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 12245 12353 . + . ID=g11034.t1.exon4;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 12245 12353 . + 0 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 12548 12737 . + . ID=g11034.t1.exon5;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 12548 12737 . + 2 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . exon 12924 13834 . + . ID=g11034.t1.exon6;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . CDS 12924 12990 . + 1 ID=cds.g11034.t1;Parent=g11034.t1 NODE_433_length_23831_cov_39.9841 . three_prime_UTR 12991 13834 . + . ID=g11034.t1.utr3p1;Parent=g11034.t1 #PROT g11034.t1 g11034 MHLSTASTWVLIVAGCVIAIATGDFILPLNPVSSIYRNDAERVASIIDTCRQKEGRSDEIAVFNRIQAARKPDNLTSDVGAFSSCVFGSCCDEAVGVDSMPAGLSIQRFASVAAHIAAAEGSSLDANGLLRDWKMTAEADSLVGPCNMERVSGDMDLNAFVSRYAERIPVVIEVGTAGSNSLFRRLTSRPQILWDNGDKRVLLSTANTYSYEKTPVRLAEYVACMMEPQHPMQSGKDSLYFFGDNNRTEWAAFFDAYELPRLIPVGMEPALSFGIAGPNTGVPFHFHGSGFAETLHGRKRWFLYPYEQRPCFDPDATPLKWVREVYPTLAAKDAPLECVLSPGEMIYFPSGWWHATLNLDETVFISTFLASR* # ORIGINAL: g11035.t1 original gene structure, not modified by PASA NODE_433_length_23831_cov_39.9841 AUGUSTUS gene 13168 15956 . - . ID=g11035;Name=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS mRNA 13168 15956 . - . ID=g11035.t1;Parent=g11035;Name=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 15815 15956 . - . ID=g11035.t1.exon1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 15815 15956 . - 0 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 15471 15647 . - . ID=g11035.t1.exon2;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 15471 15647 . - 2 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 15253 15382 . - . ID=g11035.t1.exon3;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 15253 15382 . - 2 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 15053 15104 . - . ID=g11035.t1.exon4;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 15053 15104 . - 1 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 14764 14842 . - . ID=g11035.t1.exon5;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 14764 14842 . - 0 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 14497 14580 . - . ID=g11035.t1.exon6;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 14497 14580 . - 2 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 14176 14285 . - . ID=g11035.t1.exon7;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 14176 14285 . - 2 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 13549 13734 . - . ID=g11035.t1.exon8;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 13549 13734 . - 0 ID=cds.g11035.t1;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 13168 13398 . - . ID=g11035.t1.exon9;Parent=g11035.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 13168 13398 . - 0 ID=cds.g11035.t1;Parent=g11035.t1 #PROT g11035.t1 g11035 MATIPAESKRTLDAAAEGPPRKRAHIDKGDSHVDAINEVDDVRIKKVAPLIPPQILMEDYPLSPEAVDTVKTARCALAKVIDGNDDRLVVIVGPCSIHDVKAALEYGGLLKEQMQQLSADLLVIMRVYFEKPRTTVGWKGLINDPFLDDTFQINKGLRTARKLLLELNELGVPAAVEFLDTITPQFLGDLVSWGAIGARTTESQVHRELASGLSCPVGFKNGTSGNVDIAIDAIRASCSSHRFLSVTKQGLAAIVTTAGNPHCHVILRGGSSGPNYAADHVRACGDLLRKAGLPSRIMIDCSHGNSLKLHSNQPKVANDIANQMGAGCDDIFGVMIESFLREGRQNVPAAGPAHLEYGKSITDACVAWADTIPMLEDLARGVRERRVRKAGGAPQQ* # PASA_UPDATE: g11031.t1, single gene model update, valid-1, status:[pasa:asmbl_7236,status:3], valid-1 NODE_433_length_23831_cov_39.9841 . gene 1303 3512 . + . ID=g11031;Name=g11031.t1 NODE_433_length_23831_cov_39.9841 . mRNA 1303 3512 . + . ID=g11031.t1;Parent=g11031;Name=g11031.t1 NODE_433_length_23831_cov_39.9841 . five_prime_UTR 1303 1387 . + . ID=g11031.t1.utr5p1;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . exon 1303 2238 . + . ID=g11031.t1.exon1;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . CDS 1388 2238 . + 0 ID=cds.g11031.t1;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . exon 2389 2478 . + . ID=g11031.t1.exon2;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . CDS 2389 2478 . + 1 ID=cds.g11031.t1;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . exon 2921 3512 . + . ID=g11031.t1.exon3;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . CDS 2921 3341 . + 1 ID=cds.g11031.t1;Parent=g11031.t1 NODE_433_length_23831_cov_39.9841 . three_prime_UTR 3342 3512 . + . ID=g11031.t1.utr3p1;Parent=g11031.t1 #PROT g11031.t1 g11031 MMSASYAVLVALALLASSVCASHIPPYVADGLRAGINGANQVHLALGGEQDEITVTWLTPEPASSRARYGLAASFPDIAIEVEGYAKVFVDNGTLHHTQYVHRATFASLKERARYSYQVWNGTEWGRLFGFTAPGGVSWNPTITVYGDFGLSNPRSFPALLDELSEGKSDFIVHSGDFAYDMFRDNATYGDNWFNFVEPLYAQIPVMTCAGNHEGMYDFLNYRSRFTMPMYEKTENLYFSFNAGNTHWISYDTEVYFVYEAMEGHGGIHRNFGPYPDIAAAQLKFIEEDLIRANKERHLRPWIFAYGHRPFYCSDSDDDDCTRMQDQWRVDLEKLFYTYGVDIVFEAHQHSYERLWPTYLGNVYNHTDGDGPYVNPLAPIHIVAGAAGCEEMLQPFQNGPLGPWSAVRISDYGYGHVTIHNATHAHWEQLSADKVVQDEIWIVRDKHVDYALV* # ORIGINAL: g11032.t1 original gene structure, not modified by PASA NODE_433_length_23831_cov_39.9841 AUGUSTUS gene 3981 7685 . - . ID=g11032;Name=g11032.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS mRNA 3981 7685 . - . ID=g11032.t1;Parent=g11032;Name=g11032.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS exon 3981 7685 . - . ID=g11032.t1.exon1;Parent=g11032.t1 NODE_433_length_23831_cov_39.9841 AUGUSTUS CDS 3981 7685 . - 0 ID=cds.g11032.t1;Parent=g11032.t1 #PROT g11032.t1 g11032 MGCGSSLPRRRTRAISPPPNQTRNQPAPKVGLESRSRNSVTTQPTSPDPLLGLTVYEPFHDLVGRITSFTHPPHVRVYVSISAGDSGLASAFSSFFIERLRQVFVSDISGTVVFLGPLSGRDGRIIGKTVSGARAIALRLREIAMCDVFVAVKSRDEACDSESKATLGAILDAEVDTKETAALYAEFPFLRYFTSSTVAFIERSHARTVQRTSRAVGVFFYPAVALAAPGRRESTAKKDSIMSGAESVRRVSSLVKSQRKSITIGRKQSAASYGVTAAAVLSSTSMASSGGVPMSPINSDGLTANTMLDEMGQDIARQQTTVVFEYASLAACTKELEAMLRATLGDTVLACTRGRDSAGGLIRTSGSMASIFSNDKAADDIVRGGVAIPEWEAASARQPLVSAAAFETHRMVLLHRQRMIPASDDRVLGVLDKVDGLFTRLDTIGMHPPPQQQQQQQQQQQQQQQHSPPVVAVCGAPGMGKSAALACWVRRHHPGFAEGKRPVVANYMKATPTSPTEFSQMPSRKESVSAAQRDRPPFIFYHAAGVSGESRSLSHMLARFVVDLSLHLSSRIETPDRSFLALAKYARRLVSAARKDRVSVTIVIDDFDRLVLDNKGVEVAGDTAMADKHWSSTVQLADVGRSDSTADLQGAAHVSGRSLLQGHAHDTTTSSPALNTSSGKRSLLAPLQHKSHVGSSSPNMGGRALLGGGGGGGLTASSGVLTPVHSADLRAAITSRMSFGSVCVSMVGDIFQRANKVLVSYTDRGTDYADKWWLGHPPPLHARKPLTLAIPTINQRKDVARTAAARFGVDFTADEVDALSRCDFSDNPLYMSSLVAARGRIPPALPTWPPAAGKASTSDMAGVSAALRALLQSAATVAAVSRRECTDVVRIWRLLTCTRRGLSAADVGDVLAMSEESLCASIAALLGHTCLGMEGRILCSSSMVDDALASEELPRAILNALGDNNLRESLVSGLEFGEIRGALVRSAVGAIDRDAGAAEIMRDLAWSLLRPTPLEEGESLLCDPGLIRTMMTNAKDDLYAVCAGILATEADAQRVLLDGVLSTPDCKNDDRMHTLVAGMFDQLGFPALSLKALEAGVALQERRCGTNNANSGARRALAADLANVAAVYEELRQPKSASLAFERALSVLGYRNVDLKIGVDAPENPSGPADADMDLVVSCLSGLAQSRAAMGLDKEGESISCLARDLAEDCLGEDNPAYESIKRQQESMKRKARK* # ORIGINAL: g2193.t1 original gene structure, not modified by PASA NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS gene 75 3446 . + . ID=g2193;Name=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS mRNA 75 3446 . + . ID=g2193.t1;Parent=g2193;Name=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS exon 75 1028 . + . ID=g2193.t1.exon1;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS CDS 75 1028 . + 0 ID=cds.g2193.t1;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS exon 1266 1909 . + . ID=g2193.t1.exon2;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS CDS 1266 1909 . + 0 ID=cds.g2193.t1;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS exon 2085 2294 . + . ID=g2193.t1.exon3;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS CDS 2085 2294 . + 1 ID=cds.g2193.t1;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS exon 2570 3446 . + . ID=g2193.t1.exon4;Parent=g2193.t1 NODE_3364_length_3620_cov_37.4361_potentialcontaminant AUGUSTUS CDS 2570 3446 . + 1 ID=cds.g2193.t1;Parent=g2193.t1 #PROT g2193.t1 g2193 MTNSHSQQPPWSTAYPRLPNILNDNPGAPSSNTFRDNIVFGGLYLDISFNYQSFNNEVDFTLAKAADWSAGCVARNLCANDLTLRYDRPLLSSWSQFPEDSETGAYPSCARASDPLVGVPVPTPPVCAFKPFQMPPAAGSLGFPSIKYWDFVGEGFESGAPSSLWTRVVTAGSASALSVVSGVGVAGSNAMAIALTPAEDYIEQRGLPGGEEAYLSFWMKPNGALLPRSVTSTNPGDASVTLGCLLGKDTRTVACVSIVQQETANFAVPTPYALYLSYNIKDVGTRMSYSALPDAPWYPLNDAWTKVTIGAKSDKWTKVWINDRLTWSIEGITHDTRDLLEIARVGKMGRAPGTTLGGSILFDRIRFLSPAVADLYVDPSGGSDTAAGTLASPLRTVSRAVFLAGPGTTVRLAAGLYRDRIVAYRSGYEGQPVRFVAAGATGSAVLRGSTPLKGSAFSRLSTDADQLSRAVTLGLRDDVDRAKVYVISLASTPRFVSEALTGTQLKQLVLAREPDLYAADMLKRHEYWWTAEGGSGPLLCDPAVKGCDISSVRSDKCITDGSNDALPAGVESGNLKTLPSLLNATVVALDYQQSASMFASKIVEHNVTMGRICTSNSNTMWYGSAFGYLSKYYIENHLALLDSSGEWFYSASAQSLYIYYDGDMSSANFEASSIAIGIDVTRRSFIEVNGLTLQSYDDTAVSIGGSNGQCSDRVAVLNSEIFIANRGILVSCSMPDNAPEAYTVDGVRISGNIISAVEQDAVRTQFSQTVFNRPGVQNVHVTGNWIREVGLRQFGTASAVRFDRAHRFVFADNIIEDVGRGGVEFFGSQLSQAGNAQMSGWAAADILTGGIAVRNNTLRRIGVVVGGSAALRFSVSDWVTLLYLTVSAIGVFQL* # PASA_UPDATE: g5428.t1, single gene model update, valid-1, status:[pasa:asmbl_4792,status:3], valid-1 NODE_2682_length_5464_cov_35.6613 . gene 172 4414 . + . ID=g5428;Name=g5428.t1 NODE_2682_length_5464_cov_35.6613 . mRNA 172 4414 . + . ID=g5428.t1;Parent=g5428;Name=g5428.t1 NODE_2682_length_5464_cov_35.6613 . five_prime_UTR 172 233 . + . ID=g5428.t1.utr5p1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . five_prime_UTR 869 912 . + . ID=g5428.t1.utr5p2;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 172 233 . + . ID=g5428.t1.exon1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 869 987 . + . ID=g5428.t1.exon2;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 913 987 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 1197 1358 . + . ID=g5428.t1.exon3;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 1197 1358 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 1589 1877 . + . ID=g5428.t1.exon4;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 1589 1877 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 2152 2239 . + . ID=g5428.t1.exon5;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 2152 2239 . + 2 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 2525 2921 . + . ID=g5428.t1.exon6;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 2525 2921 . + 1 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 3108 3203 . + . ID=g5428.t1.exon7;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 3108 3203 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 3475 3555 . + . ID=g5428.t1.exon8;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 3475 3555 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . exon 3821 4414 . + . ID=g5428.t1.exon9;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . CDS 3821 4123 . + 0 ID=cds.g5428.t1;Parent=g5428.t1 NODE_2682_length_5464_cov_35.6613 . three_prime_UTR 4124 4414 . + . ID=g5428.t1.utr3p1;Parent=g5428.t1 #PROT g5428.t1 g5428 MGGLLGAFFNVISKRIHKFRRDNMTTAGRKIADAMAVVVITSTLAVFLPFAFSCTPARHLVEHAGVDGMYDPDVCVSVQLWTDINNASISSEAVTEQLHGMDLRTERCPDGEYNELASLFHVSGHTAIRNLFVQGSYNVFSFSTLVTFLIVYFFLALITAGLSIPSGLVIPTVTIGSCLGRLFALFINKYDKEVHGYDLVDPGAWAMIGTAAFWCGTGRLSVTVAVIILEITGNFRWLPALAVAVTAAKLSGDFCSHSLYHILLNQKGITFLPDTPTKAMDRKMVDQIMQLNPVVLSISETVASIKSVLASNTHNGFPVVEFGSGKRRLAGLLLREQITNYFASNYQPDETIVNLGSIMHLSPQMVTIQFTASQAYTLFRNLGLRHLCVINRDFDVVGIITRKDLIGNAHYDEAMTDVEVFAEHTLASLRHTVDLSRRRSKHHSGIAEHVTVMTAMDSQTDLLANTSQQTLAVPLISESARSSAFNHGENNGESSA* # ORIGINAL: g4959.t1 original gene structure, not modified by PASA NODE_4733_length_1290_cov_28.6881 AUGUSTUS gene 140 1272 . + . ID=g4959;Name=g4959.t1 NODE_4733_length_1290_cov_28.6881 AUGUSTUS mRNA 140 1272 . + . ID=g4959.t1;Parent=g4959;Name=g4959.t1 NODE_4733_length_1290_cov_28.6881 AUGUSTUS exon 140 976 . + . ID=g4959.t1.exon1;Parent=g4959.t1 NODE_4733_length_1290_cov_28.6881 AUGUSTUS CDS 140 976 . + 0 ID=cds.g4959.t1;Parent=g4959.t1 NODE_4733_length_1290_cov_28.6881 AUGUSTUS exon 1207 1272 . + . ID=g4959.t1.exon2;Parent=g4959.t1 NODE_4733_length_1290_cov_28.6881 AUGUSTUS CDS 1207 1272 . + 0 ID=cds.g4959.t1;Parent=g4959.t1 #PROT g4959.t1 g4959 VDVVTPNGQTPLMWAASRGQVRAMAALLQRGANINHRDAVGIDSMLIASQYGQSLSMRFLADKGVSIRTTDLNGCTPAHWAAYNGKIPALRTILELGGQLSLVAVDNTGMNPLHRAVSAGQEEAAEWLKNEGCDPTDKGRCDSSPIDLARHLKNHGLVSILQQPKAKNKKGVADISLARKRAWIYPTALVCVFLVVALLYLSYLSSSPAGVSVHICFVTCLASSITLFCLLWKSDPGYMKRSPGVAPLSDLLLKEAQDDSEAPQTQGANGVCFTCEVIMPERAVHCDMCKRCVARHDHHK* # PASA_UPDATE: g4386.t1, single gene model update, valid-1, status:[pasa:asmbl_2484,status:3], valid-1 NODE_1738_length_9466_cov_37.9271 . gene 1903 8197 . + . ID=g4386;Name=g4386.t1 NODE_1738_length_9466_cov_37.9271 . mRNA 1903 8197 . + . ID=g4386.t1;Parent=g4386;Name=g4386.t1 NODE_1738_length_9466_cov_37.9271 . five_prime_UTR 1903 1975 . + . ID=g4386.t1.utr5p1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 1903 2059 . + . ID=g4386.t1.exon1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 1976 2059 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 2252 2371 . + . ID=g4386.t1.exon2;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 2252 2371 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 2528 2662 . + . ID=g4386.t1.exon3;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 2528 2662 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 2967 3078 . + . ID=g4386.t1.exon4;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 2967 3078 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 3303 3396 . + . ID=g4386.t1.exon5;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 3303 3396 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 3667 3794 . + . ID=g4386.t1.exon6;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 3667 3794 . + 1 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 4130 4247 . + . ID=g4386.t1.exon7;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 4130 4247 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 4461 4522 . + . ID=g4386.t1.exon8;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 4461 4522 . + 1 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 4878 4924 . + . ID=g4386.t1.exon9;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 4878 4924 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 5188 5254 . + . ID=g4386.t1.exon10;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 5188 5254 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 5525 5627 . + . ID=g4386.t1.exon11;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 5525 5627 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 5785 5870 . + . ID=g4386.t1.exon12;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 5785 5870 . + 1 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 6049 6099 . + . ID=g4386.t1.exon13;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 6049 6099 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 6435 6517 . + . ID=g4386.t1.exon14;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 6435 6517 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 6977 7039 . + . ID=g4386.t1.exon15;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 6977 7039 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 7273 7522 . + . ID=g4386.t1.exon16;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 7273 7522 . + 0 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . exon 7799 8197 . + . ID=g4386.t1.exon17;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . CDS 7799 7890 . + 2 ID=cds.g4386.t1;Parent=g4386.t1 NODE_1738_length_9466_cov_37.9271 . three_prime_UTR 7891 8197 . + . ID=g4386.t1.utr3p1;Parent=g4386.t1 #PROT g4386.t1 g4386 MARMLVVVAVAIGLLGSVLASPSEFTLKEEDHSFAVPHGWKHFLDMSLVQQPIRLIVAVKQNNEAAVIELLHSVSNPASEAYGQYLSFEQLATLTAPHAQSVADIVSWIEGFGGFDLVVSPTGDFISFSVQRHHAEAAFKVTLESFIHESGARILRSLRPYSVPKDIAHIVDFVGGLIRFPSMTPVLSVDDGLGTGVAVNVTPALIRKKYGINVEVRPDTKNIQAIASFLDQYYTPSDLSTFLKANNMSDTPVARVIGPNDPSNPGVEASLDIDFIMGISPVPTWIWSTAGNISGNEPFLDWLANVSSTTGPLPNIFSISYQDYEDTVSVDYMQRVNIEFAKMGVRGITLVTGSGDWGVGCNANGTRFRPDFPSSSPYIVSTGGTEFLDATTLEEGGITFSSGGFSDVFTQPSFQLKAISDFLAKSPVDKSFFNASGRAFPDVSAIAIGFQVYNGGKLISVGGTSASTPTFAAMLSLINEERLAHGRPTLGWVVPFLYAAAAADATAYTDIVKGNNAYEKCVGFDASQGWDPMTGLGTPNFPVLLKLAQATEFIPALAQFDERD* # ORIGINAL: g4387.t1 original gene structure, not modified by PASA NODE_1738_length_9466_cov_37.9271 AUGUSTUS gene 8819 9172 . + . ID=g4387;Name=g4387.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS mRNA 8819 9172 . + . ID=g4387.t1;Parent=g4387;Name=g4387.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS exon 8819 9172 . + . ID=g4387.t1.exon1;Parent=g4387.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS CDS 8819 9172 . + 0 ID=cds.g4387.t1;Parent=g4387.t1 #PROT g4387.t1 g4387 MADTSSSNVDWDISEGFGSMDVADDTPNPTSFVTDMSAANRVRGKRELKALIRSGRLGGERTRPTDEEIARRQSVFELDAQEFMRKPRIDIVELLNSGKMIKICAPMVRYTRFVGRL* # ORIGINAL: g4385.t1 original gene structure, not modified by PASA NODE_1738_length_9466_cov_37.9271 AUGUSTUS gene 227 1500 . - . ID=g4385;Name=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS mRNA 227 1500 . - . ID=g4385.t1;Parent=g4385;Name=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS exon 1145 1500 . - . ID=g4385.t1.exon1;Parent=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS CDS 1145 1500 . - 0 ID=cds.g4385.t1;Parent=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS exon 903 975 . - . ID=g4385.t1.exon2;Parent=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS CDS 903 975 . - 1 ID=cds.g4385.t1;Parent=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS exon 227 743 . - . ID=g4385.t1.exon3;Parent=g4385.t1 NODE_1738_length_9466_cov_37.9271 AUGUSTUS CDS 227 743 . - 0 ID=cds.g4385.t1;Parent=g4385.t1 #PROT g4385.t1 g4385 MDGPASDTVPHAANSAGPSMALPHTLHPATAALISCARRLMFVTVLVYLVATHSIVSVAVPPRNNRQYLPHTPSRLIELREKVRDIFSHAYDGYMLNAFPLDELDPLKCIGRGPDRNDPANININDVLGGYPLTLIESMTTLAVIGNRTEFLRAVDTVIATVRSFDLDSHVQVFEATIRLMGSLLSTHLILLDDNAMAAMASAEEDLRQATCVAKRLDQTRGGRCSTSESCVRRATAAAPFHYGGELLSLAHDLGRRLLPAFRESPTGIPYPRVNLRFGMTPFARTYVENCPAGAGTLLLEFGTLSRLVNDWRFE # ORIGINAL: g6661.t1 original gene structure, not modified by PASA NODE_4003_length_2371_cov_36.4887 AUGUSTUS gene 354 2282 . + . ID=g6661;Name=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS mRNA 354 2282 . + . ID=g6661.t1;Parent=g6661;Name=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS exon 354 703 . + . ID=g6661.t1.exon1;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS CDS 354 703 . + 0 ID=cds.g6661.t1;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS exon 937 1030 . + . ID=g6661.t1.exon2;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS CDS 937 1030 . + 1 ID=cds.g6661.t1;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS exon 1671 1808 . + . ID=g6661.t1.exon3;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS CDS 1671 1808 . + 0 ID=cds.g6661.t1;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS exon 2060 2282 . + . ID=g6661.t1.exon4;Parent=g6661.t1 NODE_4003_length_2371_cov_36.4887 AUGUSTUS CDS 2060 2282 . + 0 ID=cds.g6661.t1;Parent=g6661.t1 #PROT g6661.t1 g6661 HSSALDVRCLAFEPTENQLDDEKNVILIPNQERQQVAFYVGTVLMDFAASLLKILGTIYRAKTVDRTVLLSVPFERQLGADEARMSAVYRRRITGRVEKMLGDLSLLAGSPADAQLHYEEAIEQAKSANDWLWLAGALEGHCCALLKRVRGAGVVQLEAMFKLARFAVAHGRPLDASRALQDAQSIDGMNDADKVRIYGNLAVLYQTIGFQRKAALSIRLMTSLCDRGTEATNWASAHKLLLATLAAYRLDDLRKYVEAQVVSDTQIA # PASA_UPDATE: g5070.t1, single gene model update, valid-1, status:[pasa:asmbl_10028,status:3], valid-1 NODE_930_length_15774_cov_41.8536 . gene 4843 9108 . + . ID=g5070;Name=g5070.t1 NODE_930_length_15774_cov_41.8536 . mRNA 4843 9108 . + . ID=g5070.t1;Parent=g5070;Name=g5070.t1 NODE_930_length_15774_cov_41.8536 . five_prime_UTR 4843 4996 . + . ID=g5070.t1.utr5p1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 4843 5059 . + . ID=g5070.t1.exon1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 4997 5059 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 5273 5422 . + . ID=g5070.t1.exon2;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 5273 5422 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 5603 5734 . + . ID=g5070.t1.exon3;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 5603 5734 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 6041 6169 . + . ID=g5070.t1.exon4;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 6041 6169 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 6315 6450 . + . ID=g5070.t1.exon5;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 6315 6450 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 6999 7075 . + . ID=g5070.t1.exon6;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 6999 7075 . + 2 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 7188 7322 . + . ID=g5070.t1.exon7;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 7188 7322 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 7538 7628 . + . ID=g5070.t1.exon8;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 7538 7628 . + 0 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . exon 7843 9108 . + . ID=g5070.t1.exon9;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . CDS 7843 8831 . + 2 ID=cds.g5070.t1;Parent=g5070.t1 NODE_930_length_15774_cov_41.8536 . three_prime_UTR 8832 9108 . + . ID=g5070.t1.utr3p1;Parent=g5070.t1 #PROT g5070.t1 g5070 MVQEFQSTIWVYKYPFELVMAAYECRFPTSPLIPVFLGSELLLDQKSDDGAVHTIERRCKLDVEAPGWFKKILGVDHIFFIQRNTLNRRERTLLIEAWNESFSSKVEINEKCRYKVHPENGEWTAFDQEARLKVKSFLGMESAIEKYAMKNYLKNINRGKEVIEYYVAELKSKGVTHIAPFDTKVEVIAQTPVDVEDVKLSQEDYKLESTYVKRYLGDLLDTEVSELIKLRERLTRMGRTPLPNDKFLLRFLRAREFNLERTMELLLKSLEWRKENNVDEIYKSWEAPEVFVDYFPGGWGKPDKEGRPVFIMRLGQIDIKGIVRSAGERSVLKQMIKFNEEAMKNIDTATENSGKPILDCTCLVDLEGLSLRHLWRPGLSLIQKMIQIDSNNYPETMSRLVIVRAPRIFPVVWSIVRNVFDERTRNKIVICGDDYRDVINELIPEAHVPDFLGGKHRCDFSTGGIVPKSLYLPSDSSENVMGNDDAVYTTAQISRGSTFRVPIEVKAPDTVITWDFNVIGSDIGFAIYVCPSGTDPGEAHASDMEEVQAYQKHVDGESVQGSIVCSRVGCFVLRWDNTYSWMLSKSIRYHVDVIDPLEYRRSMSSLISADTMSIISGLSQMSADTSAISHLSR* # PASA_UPDATE: g5071.t1, single gene model update, valid-1, status:[pasa:asmbl_10027,status:12], valid-1 NODE_930_length_15774_cov_41.8536 . gene 10175 15097 . - . ID=g5071;Name=g5071.t1 NODE_930_length_15774_cov_41.8536 . mRNA 10175 15097 . - . ID=g5071.t1;Parent=g5071;Name=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 15032 15097 . - . ID=g5071.t1.exon1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 15032 15097 . - 0 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 14610 14693 . - . ID=g5071.t1.exon2;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 14610 14693 . - 0 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 13656 14306 . - . ID=g5071.t1.exon3;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 13656 14306 . - 0 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 13152 13410 . - . ID=g5071.t1.exon4;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 13152 13410 . - 0 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 12559 12802 . - . ID=g5071.t1.exon5;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 12559 12802 . - 2 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 12225 12345 . - . ID=g5071.t1.exon6;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 12225 12345 . - 1 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 11886 11973 . - . ID=g5071.t1.exon7;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 11886 11973 . - 0 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . exon 10175 11709 . - . ID=g5071.t1.exon8;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . CDS 10511 11709 . - 2 ID=cds.g5071.t1;Parent=g5071.t1 NODE_930_length_15774_cov_41.8536 . three_prime_UTR 10175 10510 . - . ID=g5071.t1.utr3p1;Parent=g5071.t1 #PROT g5071.t1 g5071 MEPSGTGKAAEPARAVKEEDSMNFYEVEGLRLTETYKKQAQSMLENDFPQYSIKGIRAVYRACNFQYAKSNRAIRRIIERQAKERAAINADDIVFVDARSAGVGSLDLNAATIRILGNVRPAVPRPIDMDPLLKREIAFVRRDMSGDSHNDGGAALAVGSDGSGGRGGSANSHAGDVGSGGVAAIAGAGNGIGGGVNRVGSAALVTTLVTAPAAAPVAAPVTTPVNKLRAGVTQSPAKNNGARAASEAEEANIECGCCFGTFVFDNMVQCPEGHLFCRECVGNYAKNATFGGGKSQLQCMSSDICDAEFSRGQLARALPADLMDKYDARVQEESLAKASADIPNLFRCPFCPYAAILDDGAAFFACQASGCGKRTCCKCKELYADHEGKTCAEVESSSDTAFRKMVEERMTKARLRECPKCKTEFLKDSGCNKMTCRCGQVMCYVCRVPIAAQTGYNHFCQHPLDPGQPCNKCNQCLLWAPDDDDTLIERIRKEAEAELAKTDAENQRKRKIQIATPSEPDPKRARVGNAVGPDPMLGQMFLRGFGYHFQFDHGEDDDENGEDDDDDDGEDDDDDGEDDDDDGQDDDGGDPFGHRGLVGPVLGRPIDNRQAIYQNIRLPNMRLPNVYNRETVRAQVERAVAVRRTVRQRTAEIVPNTNAAPNQHAAPNRHAAPNRHAAPNPHAAPNPHAAPNPHAAPNPHAAPIRHALPNPYAVTVRRVVPPVAALPAAARRPTRVADAHPPPPQRPAAAAAPPVARPAPERMKPPAPTLPEHTVPLPPQGRPRAHGTTDDTKLNAPTDATNAGAMPEPSRPRAPPVAPRDVGPPARPAMPVPPVPSGPRQAPHKMGGQPCGAGCVCHAPQPIPATQQLRPSDSKRKRSSSQDDAVRQPRMKQEPAGVKRKYF* # ORIGINAL: g5069.t1 original gene structure, not modified by PASA NODE_930_length_15774_cov_41.8536 AUGUSTUS gene 2781 3341 . - . ID=g5069;Name=g5069.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS mRNA 2781 3341 . - . ID=g5069.t1;Parent=g5069;Name=g5069.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS exon 2781 3341 . - . ID=g5069.t1.exon1;Parent=g5069.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS CDS 2781 3341 . - 0 ID=cds.g5069.t1;Parent=g5069.t1 #PROT g5069.t1 g5069 MTFQQPQYQQQPPQPLQPPQHQHCLPPPYSAPLTAAHPPVPPSGSSNYREQHNEQSPYDAKTLMQTPELHYVYPPQSMYPPAEGYPTASPYGPGPVTTQPTATQPTTKVVNINSRAPCELRCPFCSHYGLTHVTHETGTTTWVAAGITCLFLPCCCCIPFCVDGLKDAQHRCAKCNQIISLKKPNF* # PASA_UPDATE: g5068.t1, single gene model update, valid-1, status:[pasa:asmbl_10026,status:12], valid-1 NODE_930_length_15774_cov_41.8536 . gene 1223 2080 . - . ID=g5068;Name=g5068.t1 NODE_930_length_15774_cov_41.8536 . mRNA 1223 2080 . - . ID=g5068.t1;Parent=g5068;Name=g5068.t1 NODE_930_length_15774_cov_41.8536 . five_prime_UTR 1973 2080 . - . ID=g5068.t1.utr5p1;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . exon 1735 2080 . - . ID=g5068.t1.exon1;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . CDS 1735 1972 . - 0 ID=cds.g5068.t1;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . exon 1457 1632 . - . ID=g5068.t1.exon2;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . CDS 1457 1632 . - 2 ID=cds.g5068.t1;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . exon 1223 1326 . - . ID=g5068.t1.exon3;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . CDS 1309 1326 . - 0 ID=cds.g5068.t1;Parent=g5068.t1 NODE_930_length_15774_cov_41.8536 . three_prime_UTR 1223 1308 . - . ID=g5068.t1.utr3p1;Parent=g5068.t1 #PROT g5068.t1 g5068 MDLGISGRTTGAAKPASLRSTPPVRTGSSSRLVAAGSLGSVRSTSASSRSTASSRVSSGASDSVSRVMRPTEWSPEVEEAFRLQCAGWKSVEEYVLTKKCQPDRWEESGRIKKLSIKGTTHWNYFSRDRECTSSHIGKVKIYH* # ORIGINAL: g5067.t1 original gene structure, not modified by PASA NODE_930_length_15774_cov_41.8536 AUGUSTUS gene 219 1066 . + . ID=g5067;Name=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS mRNA 219 1066 . + . ID=g5067.t1;Parent=g5067;Name=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS exon 219 382 . + . ID=g5067.t1.exon1;Parent=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS CDS 219 382 . + 2 ID=cds.g5067.t1;Parent=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS exon 589 699 . + . ID=g5067.t1.exon2;Parent=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS CDS 589 699 . + 0 ID=cds.g5067.t1;Parent=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS exon 971 1066 . + . ID=g5067.t1.exon3;Parent=g5067.t1 NODE_930_length_15774_cov_41.8536 AUGUSTUS CDS 971 1066 . + 0 ID=cds.g5067.t1;Parent=g5067.t1 #PROT g5067.t1 g5067 DRPPMTIYDSNGLSVIFHMTKNSPAPGVVVIAVSYLNSRPSPMKNFMFQVAVPKTMLVKLQAASAPELPGFSITRGQQPVTQVMLVAKPATMTSLRLKFRLSYNYEDKPVTDQGDVAEITNV* # ORIGINAL: g4506.t1 original gene structure, not modified by PASA NODE_4367_length_1729_cov_39.4577 AUGUSTUS gene 2 1729 . + . ID=g4506;Name=g4506.t1 NODE_4367_length_1729_cov_39.4577 AUGUSTUS mRNA 2 1729 . + . ID=g4506.t1;Parent=g4506;Name=g4506.t1 NODE_4367_length_1729_cov_39.4577 AUGUSTUS exon 2 1729 . + . ID=g4506.t1.exon1;Parent=g4506.t1 NODE_4367_length_1729_cov_39.4577 AUGUSTUS CDS 2 1729 . + 0 ID=cds.g4506.t1;Parent=g4506.t1 #PROT g4506.t1 g4506 VASKGRTTIVIAHRLSTVKNADCIAVVQKGKIMETGTHDELMAREGGLYRQLVESQMNAKAKEEDVNEPKPLERGPSFFRSKGDQLITGAPVAKEEKKADGLHESDTYPVSFARILRSSHGDYIKMIIGTLAAAGNGVIMPLFAIFFSAIINVFTKVGDDLRDGARFWSGMFVVLAFATAICNYLQIAMFTIAGENLTNRLRQDSFRAIVRQDISFFDDKRNGTGALTTRLASDASLVQGMIGSRLGSLVQILSNAIAGLIIAFVGGWKLTLVILACVPMVATAGMLQLKALAGYSAKGKASYETSGQVACEAIECIRTVQSLGLEKQTVDKYARFITHPYKLGLRRAHVAGIGFGVSQAVMFITWAIAFYYGGTLVKTGEYTFLNMMRVFSAVIFTAMTVGQISSMAPDYAKAKIAASNIFWLVDHQSAIDPTSGDGDKPESCQGLIEFKDVAFSYPTRSNIPILRKFTLAVEPGQTIAITGHSGCGKSTAIQLVERFYDTAKGSVSIDGNDIKKLNVRWLRQQMGLVGQEPVLFATTIAENIRYGRDGATMEDIVAACKMANIHSFIDTLPDKY # ORIGINAL: g12760.t1 original gene structure, not modified by PASA NODE_472_length_23114_cov_41.0235 AUGUSTUS gene 5712 8405 . - . ID=g12760;Name=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS mRNA 5712 8405 . - . ID=g12760.t1;Parent=g12760;Name=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 8279 8405 . - . ID=g12760.t1.exon1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 8279 8405 . - 0 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 8019 8104 . - . ID=g12760.t1.exon2;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 8019 8104 . - 2 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 7767 7906 . - . ID=g12760.t1.exon3;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 7767 7906 . - 0 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 7336 7451 . - . ID=g12760.t1.exon4;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 7336 7451 . - 1 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 6931 7027 . - . ID=g12760.t1.exon5;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 6931 7027 . - 2 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 6348 6420 . - . ID=g12760.t1.exon6;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 6348 6420 . - 1 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 5920 6117 . - . ID=g12760.t1.exon7;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 5920 6117 . - 0 ID=cds.g12760.t1;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 5712 5786 . - . ID=g12760.t1.exon8;Parent=g12760.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 5712 5786 . - 0 ID=cds.g12760.t1;Parent=g12760.t1 #PROT g12760.t1 g12760 MWTPKEFERVKRRYEATAITRMEVDTPHTTTPVRMASWPSSKPFEKPQPATEEVRAFRHVDAQTEVSGEIQSSPARTSSSSGVATTSNSEHLPRNGAPPASGIVRTSQHMHLPYIIMGYLQLTFNAFVVGFMMYLAIQFLFTIQNDVDIKVDLHSQDIMKEILLCSKNYADNRCTPPDRIPAMEELCMQAKISAETFAGIVNSFIEPISYKTMIFFAIFLFGFLFASNFAFHFARTRYPDPSASGVAHLPPSTSSSAMAHSHQFAMGSLHGHPSLQHPSLTGEQQHLSDRWSHMSLSTPTKYS* # ORIGINAL: g12763.t1 original gene structure, not modified by PASA NODE_472_length_23114_cov_41.0235 AUGUSTUS gene 20876 22919 . - . ID=g12763;Name=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS mRNA 20876 22919 . - . ID=g12763.t1;Parent=g12763;Name=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 22597 22919 . - . ID=g12763.t1.exon1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 22597 22919 . - 0 ID=cds.g12763.t1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 22246 22420 . - . ID=g12763.t1.exon2;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 22246 22420 . - 1 ID=cds.g12763.t1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 21878 22045 . - . ID=g12763.t1.exon3;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 21878 22045 . - 0 ID=cds.g12763.t1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 21443 21586 . - . ID=g12763.t1.exon4;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 21443 21586 . - 0 ID=cds.g12763.t1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 21175 21308 . - . ID=g12763.t1.exon5;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 21175 21308 . - 0 ID=cds.g12763.t1;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 20876 20993 . - . ID=g12763.t1.exon6;Parent=g12763.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 20876 20993 . - 1 ID=cds.g12763.t1;Parent=g12763.t1 #PROT g12763.t1 g12763 MLDVNAVVWLETYLQTWPGTIFVVSHDRDFLNSITTDTIHMWSQRLDAYKGNYEQFERTRMERQLNQQREYESQLMYRKHLQDFIDRWRYNAKRAPQAQSKIKILEKLPVLLPVEFDAPVVFEFPAPEKLGPPILEFTDVGFHYDPSLPIFGRVNFGATMESRVALVGANGNGKSTLLKLVTGELSAITGTVSRHRKLRLGYFSQHHVDGLTLDVCAVEHLQRKYPGKTVEEYRRQLGCYGISGDVGLQPIRTLSGGQKSRVAFADIGMQSPHLLVLDEPTNHLDVETVDALSRAIMAFTGGVVLVSHDERLITSACNELWICENKSVTRFEGGFKEYKTKLVADAAAALLQR* # PASA_UPDATE: g12759.t1, single gene model update, valid-1, status:[pasa:asmbl_7566,status:3], valid-1 NODE_472_length_23114_cov_41.0235 . gene 1996 4857 . + . ID=g12759;Name=g12759.t1 NODE_472_length_23114_cov_41.0235 . mRNA 1996 4857 . + . ID=g12759.t1;Parent=g12759;Name=g12759.t1 NODE_472_length_23114_cov_41.0235 . five_prime_UTR 1996 2089 . + . ID=g12759.t1.utr5p1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 1996 2425 . + . ID=g12759.t1.exon1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 2090 2425 . + 0 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 2776 2923 . + . ID=g12759.t1.exon2;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 2776 2923 . + 0 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 3132 3268 . + . ID=g12759.t1.exon3;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 3132 3268 . + 2 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 3663 3789 . + . ID=g12759.t1.exon4;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 3663 3789 . + 0 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 3987 4171 . + . ID=g12759.t1.exon5;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 3987 4171 . + 2 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . exon 4402 4857 . + . ID=g12759.t1.exon6;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . CDS 4402 4779 . + 0 ID=cds.g12759.t1;Parent=g12759.t1 NODE_472_length_23114_cov_41.0235 . three_prime_UTR 4780 4857 . + . ID=g12759.t1.utr3p1;Parent=g12759.t1 #PROT g12759.t1 g12759 MLRLGVPVAPACASTASLRGSRSLCVLCLLFLASTAIALENGLAITPPMGFNSWYALGCDRLSGNAAIDIGKEMKTLGLVDAGYSYFVLDDCWENATRDADDMLQPDPVKFPMGMRAVSDSLRSLGLTLGLYSTPGVFTCMHRPASRYHEEKDAHQLIENWGVGYFKYCVCNTTREWRQTAYGVMLNALRATGREIMYECDPWMDKPWEWMGPICNLWAAHDDIPDNFTAWTAALDDLEDWDVRVGSGPGHWSLPDFLQIGNGGQSEDEYRAQFAIYCILASPLFVSTDFRSAPAYAAEIYRHRAAIAINQDPLGIQGARVWQARKNSTDDPTAEVWARPLDGGRYAAVLFNRGNATVTVRAAFDDISSFSWGDNWQAHIAGLPRTAAGGVTSSFKYALVRDVWSGVVLGLLPESVQLDLAPHAAAFFEIAPVFDA* # ORIGINAL: g12761.t1 original gene structure, not modified by PASA NODE_472_length_23114_cov_41.0235 AUGUSTUS gene 9076 12978 . + . ID=g12761;Name=g12761.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS mRNA 9076 12978 . + . ID=g12761.t1;Parent=g12761;Name=g12761.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 9076 9181 . + . ID=g12761.t1.exon1;Parent=g12761.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 9076 9181 . + 0 ID=cds.g12761.t1;Parent=g12761.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS exon 9359 12978 . + . ID=g12761.t1.exon2;Parent=g12761.t1 NODE_472_length_23114_cov_41.0235 AUGUSTUS CDS 9359 12978 . + 2 ID=cds.g12761.t1;Parent=g12761.t1 #PROT g12761.t1 g12761 MQTTQFYVPPRDPTTGRPSTAGDRTLRTSNAAKAGVGSRPTSRPSTAGSGTAAARFPGAAIPKTSTSRPQTASSKKGAASSSSPARPSTAPAAWRPPSTNPVRPAPAVPASPPKEPRSPSREAPMSPRTRVLEEEYRILRRKYEYNIKALSQMTADRIDADERARQLEEGFENSTYNYGLIKFHHDRLRRGQKSISEDVLRSMLKPVHDGENLLASIQSRDFDQSSSGVKEGMQRGAVGNDDELSDEEEMEAKALADKYLRADAEIELVGSGGSSPDDNYDANADAEERHERTQTETEEARRDIRRMDSPYAGKLGSAGSSPKSARRVWTAADDYSTQGSEDIQGVSTRWNADADRALEQAWKRRMLIEPEVEEPDAAYPDDDDIEDGVYADSRGNSRAGSRVQFTRKGHLQSARDDSDEEEYGDEGFATQAPQRSITPGDVEDGCYEYSEGGDVDTRREDDDEDDDEADADENNDDGEGAALTEDDLRSSAPSSPSRTPARPSSRGSGGVLKNESLLDRSAEKISRMWEDFAVESYEPKVVTRARPAERAKGEQRPRHTVPEPFQFHYRPRVHTRSERMMEDELTKKRVEEEALVKRTGAFRANPLPATTLLPMYEQMEVEKERRREEIRRQTHEKLAATQKPFSFYERDVANREHRLSQRPPTPPYPKPVFKAQPPPPSVTHPKESYEARVAEEEALRQLRIRRRAQELMLQASLPSNMLYDRLADTHERRKVFAEREQRAFFTQDHTFHPWTHGDPPDFELLNSKIDKELHVRKEENKRRSTVMRPFELRTERIPSRKDAVYEDVLLDEMKLKETRWPFTMSRRPPVSGQVAATPPPAKPTRMTKASKMRENVVRRSLRDEEYERQREARTRQLEAERLRMLTGQVVRRVAAKDIGKKREDDRIRKVAVFRANDRRRQEEYQRQLEEIETRTSQRPLIFERPSEVDARKAVERRLEAALAEAGLSAKEIRDIRQYLGPTGKIDDVEGLFRREKGRSVAYDPTRYSDAGDSSHLDDASDEGSLEQRLWTKSPASARKQHLDDGDSELAMSGGTYESATATTEQSSASASASHRRGGSSSVDKARSVSTLSSQKSGGVQTQRGKEAYARDDDRSESTADVRSESIAAGSVSDIRSSVRSNVSNLRSNNSNNSNNNSSNIRSHNSNNSNNISNNIDAQGRHKSAVAELHEQSRSEDEGKYSDDYESPGETTVTGSDVSEHVSERLDSEDDSQGPGDGHSSH* # PASA_UPDATE: g12762.t1, single gene model update, valid-1, status:[pasa:asmbl_7567,status:3], valid-1 NODE_472_length_23114_cov_41.0235 . gene 13710 20368 . + . ID=g12762;Name=g12762.t1 NODE_472_length_23114_cov_41.0235 . mRNA 13710 20368 . + . ID=g12762.t1;Parent=g12762;Name=g12762.t1 NODE_472_length_23114_cov_41.0235 . five_prime_UTR 13710 13918 . + . ID=g12762.t1.utr5p1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . five_prime_UTR 14027 14109 . + . ID=g12762.t1.utr5p2;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 13710 13918 . + . ID=g12762.t1.exon1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 14027 14211 . + . ID=g12762.t1.exon2;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 14110 14211 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 14394 14495 . + . ID=g12762.t1.exon3;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 14394 14495 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 14603 14675 . + . ID=g12762.t1.exon4;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 14603 14675 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 14814 14920 . + . ID=g12762.t1.exon5;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 14814 14920 . + 2 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 15076 15191 . + . ID=g12762.t1.exon6;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 15076 15191 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 15465 15699 . + . ID=g12762.t1.exon7;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 15465 15699 . + 1 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 15879 17349 . + . ID=g12762.t1.exon8;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 15879 17349 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 17641 17870 . + . ID=g12762.t1.exon9;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 17641 17870 . + 2 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 18096 18243 . + . ID=g12762.t1.exon10;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 18096 18243 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 18470 18700 . + . ID=g12762.t1.exon11;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 18470 18700 . + 2 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 18909 19083 . + . ID=g12762.t1.exon12;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 18909 19083 . + 2 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 19347 19443 . + . ID=g12762.t1.exon13;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 19347 19443 . + 1 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . exon 19680 20368 . + . ID=g12762.t1.exon14;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . CDS 19680 19826 . + 0 ID=cds.g12762.t1;Parent=g12762.t1 NODE_472_length_23114_cov_41.0235 . three_prime_UTR 19827 20368 . + . ID=g12762.t1.utr3p1;Parent=g12762.t1 #PROT g12762.t1 g12762 MDRVKQTLLDFSQPIDVPTLDAVVRVMMEGSGKEHAEVNSILTAFKQHPEAWMRVDRILELSQYEFTRFFGLQVLEEAIATRWNVMPREQCEGIKGYIVSMIIKISAEEAEAARQRLFLLKLDKVLVQILKHEWPQNWPTFISDIVGASKTNESLCENNMRILQLLSEDVFDYSATEMTQAKARRLKDTMCDEFVKLFDLCVFVLEMSSKVSLVSATLDTLLRFLNWIPLGYIFETNIIETLVCTFLKVSMFRNIALKCLTEIASLQIGGQYEEKFVAMFTSSIEVIKGLLGHDTNIREAYRVGSDDDQLFVHNLSLYLTAFLKEHSKTIEAGQTPLRELLLLAHSYLVSISEVDDTETFKICLEYWIWLTSGLYNEQPYTMSTVTAHQMYAMPRSSGMGGTPRRRDFYAGILSRVRLVMISKMAKPEEVLVVENEQGEVVREHMKDTDAITMYKNMRECLVYLTHLDYLDTEKLMTKKLERQVDDSEWSWKNLNTLCWAIGSISGAMAEEDEKRFLVNVIKDLLGLCEKKRGKDNKAVIASNIMYIVGQYPRFLRAHWKFLKTVINKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVTVQVGEVCPFVEEIITTMPTIVCDLQPLQIHTFYEAVGHMIGAQSDALLRERWIEQFMHMPNQIWESIVDDARNNPSVLENLDRVRQLSNILKINIRACTSIGHAFVSQLARIYYDMLNVYKCVSEIVSMAISSHGETATRMPICKAIFGVKKDTLKLIETWVTRSEDPAVVMEKFLPPLFDAVLNDYQRNIPQAREPEVLFVLASIINKLKNHITPNVPMIFNAVFGCTLDMINKDFEVFPEHRTNFFLLLEALTRNCFAAFFMIPPDQFKLVIDSIVWAFRHTMRNVAETGLVVLYELLQNVNQGDVTIAQMFFQTYLLQVMQHMFAVLTDMQHKAGFKMHATILAHCFYLVESGRVTVPLYDSILPRLPSISNSQYLRDFVARLLSGAFPHLTPIQIEASVNGMAQLCQDLPSFKKHLRDFLVQIKEFAGQDNRDLFLEETENDRNREIEEKRKAQLAIPGLLNPFDRPEEMAD* # PASA_UPDATE: g12758.t1, single gene model update, valid-1, status:[pasa:asmbl_7565,status:12], valid-1 NODE_472_length_23114_cov_41.0235 . gene 327 1770 . - . ID=g12758;Name=g12758.t1 NODE_472_length_23114_cov_41.0235 . mRNA 327 1770 . - . ID=g12758.t1;Parent=g12758;Name=g12758.t1 NODE_472_length_23114_cov_41.0235 . five_prime_UTR 1441 1770 . - . ID=g12758.t1.utr5p1;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . exon 1308 1770 . - . ID=g12758.t1.exon1;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . CDS 1308 1440 . - 0 ID=cds.g12758.t1;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . exon 756 1006 . - . ID=g12758.t1.exon2;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . CDS 756 1006 . - 2 ID=cds.g12758.t1;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . exon 327 578 . - . ID=g12758.t1.exon3;Parent=g12758.t1 NODE_472_length_23114_cov_41.0235 . CDS 327 578 . - 0 ID=cds.g12758.t1;Parent=g12758.t1;3_prime_partial=true #PROT g12758.t1 g12758 MAQLLLTDTLRTLLTTSLSLYGTSLSKDVVREINEVIRNADALIVADDDDAGADPSGVAAMEDVVVDKPNTQEGNTEDDALELPRPVVPFGLLRRLQDALRSTPGAFFLHEATAGSEIVVSQPPKRPRNPELIARLIRLRAQQQEREYMSMVRSVAPESASEGIRGSKTDVRMMNDALSIAFGMIFTMVGVFAATYHVSYYAFQKDNALTAK # ORIGINAL: g6128.t1 original gene structure, not modified by PASA NODE_759_length_18052_cov_42.618 AUGUSTUS gene 1004 5576 . + . ID=g6128;Name=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS mRNA 1004 5576 . + . ID=g6128.t1;Parent=g6128;Name=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 1004 1394 . + . ID=g6128.t1.exon1;Parent=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 1004 1394 . + 0 ID=cds.g6128.t1;Parent=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 1485 2404 . + . ID=g6128.t1.exon2;Parent=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 1485 2404 . + 2 ID=cds.g6128.t1;Parent=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 2556 5576 . + . ID=g6128.t1.exon3;Parent=g6128.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 2556 5576 . + 0 ID=cds.g6128.t1;Parent=g6128.t1 #PROT g6128.t1 g6128 MGACASANAVGVHPPIHPPIHPPIHSPIHPEGVQATVAHAPPASGGAKNLPSRKTLITEKQHSSNTAAASQSNSAANHGSQIASASGNASGNAQTSRSSLNAHGSKGASHSLRFESDGWIIDSCGIRKTRGFELSRLRNGSWVRHEVPVHFITDKSQTALLGVSDSASASVQRVTLKSADGQGCQAALKRICLREDSARAQAINELRALLALSTTMTSDQMQQACIVRPLAVCYQEGEGDDTSPYLCIFLELCSAGSLEDALTFCGSPYAPPALQATLLPSESHGGAGADAVLRAVARSALQSLSAMHSASLAHRDVKPSNILCWDDGRFALGDYGTAVSFAGDEGARGGRSTLAGTRLFMAPEVRGGVVEHSLRACHAGDMWSLGVSLVVIACGGRHPFSMDGDSDATPGDDSSAPAIPDCLPTWASEELRTFVGKMVHPNADCRPSAVALLADPYLCTGDSDAEHELLLAWLRPVVRVYQMQCRANNAMSMRELAAMQRSEHAWCSAFPSASTAPGHMSSRVDDKPNDTTGEISGDAGALFTIPVMIKICANADDERALARHPLGQPHHGTVQAPGEHARWWSAGWLPHHVARLGANGVLEVFCGCTRVMSWNIADRVSIRRFTALHDERVSLDEGEDDAGNVGDVPFLLSDKFGFCVRPGRNADSGEADAYPACYIATGSTAARDRLTLGADLPGLRAAVEDIMSAMGRFMSGYRIGLRLSFIEEFVRRHPEALSLTTGEVVGKIIHPLTVASGTSYIDTYLRHDGSRHLAPATAFISHAWACPFVSILDAMRDNGGHASAGLNAYELRHDRPGDEAVWIDIFAKNQHVIAASETLTELSTGIDSAFHPSYGRPRVVFVMDPWPNPIALTRVWCLFELLTACKLGAHLGMALSVASRSAFRNELVAADGARSFEFQPTGEAHIESFKVDVRNSQATVAQDRDMILGKIEREYGIDKMNATVGGALFWGLAAARTFLELVSKDDQPASRQHSHNKEHNKEVGHVVIADNSGATVSIANKVNGIRGAQRPNESEIDKKAPVPGTHATREDGKLTAASSGPRVLEPDAKHPSFVMPPGVYEIQSVGSYLGYATALMTSKIPVRIERNVYDSNWRSRLADDMTLVRLANALLRSGPRHPNVCVLIDCWVTATDPPTSYLVTPGGALLYTVVRLSAESLTESHAQYVAYQLFDALAFLHRRGIAHRNVTPRTIEIAEDVSIFLIGFGSAGDCRGATKIMLTEYIEYGPYHPPESLISQLGVDRRAGDVWSAACVVAYVLSRGQELFKGHNVTVILTDIVAKIGPPPDSWYATAKISERARSFIKALPDPDDRAAILQGLFPANTTPAALTFLRRCLAFDPAERSSAEELMRDAWMLDVRAQFEDDDQTEGVQTAAEGPIEPLPPIPSIAVVKTKIERDASKEEMLALFAAETAEFYRLRDVELAR* # ORIGINAL: g6129.t1 original gene structure, not modified by PASA NODE_759_length_18052_cov_42.618 AUGUSTUS gene 6048 6583 . + . ID=g6129;Name=g6129.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS mRNA 6048 6583 . + . ID=g6129.t1;Parent=g6129;Name=g6129.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 6048 6209 . + . ID=g6129.t1.exon1;Parent=g6129.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 6048 6209 . + 0 ID=cds.g6129.t1;Parent=g6129.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 6491 6583 . + . ID=g6129.t1.exon2;Parent=g6129.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 6491 6583 . + 0 ID=cds.g6129.t1;Parent=g6129.t1 #PROT g6129.t1 g6129 MSSGFGASGGSGRCHPFWIDFKECMHKHKDASEELVQCRLLREDYMECLHHRKLTERNRILDEKRAEVAAAKAKAATRESNSRK* # PASA_UPDATE: g6132.t1, single gene model update, valid-1, status:[pasa:asmbl_9227,status:12], valid-1 NODE_759_length_18052_cov_42.618 . gene 11130 12329 . - . ID=g6132;Name=g6132.t1 NODE_759_length_18052_cov_42.618 . mRNA 11130 12329 . - . ID=g6132.t1;Parent=g6132;Name=g6132.t1 NODE_759_length_18052_cov_42.618 . five_prime_UTR 12236 12329 . - . ID=g6132.t1.utr5p1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . exon 12142 12329 . - . ID=g6132.t1.exon1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . CDS 12142 12235 . - 0 ID=cds.g6132.t1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . exon 11957 12004 . - . ID=g6132.t1.exon2;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . CDS 11957 12004 . - 2 ID=cds.g6132.t1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . exon 11609 11663 . - . ID=g6132.t1.exon3;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . CDS 11609 11663 . - 2 ID=cds.g6132.t1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . exon 11130 11341 . - . ID=g6132.t1.exon4;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . CDS 11239 11341 . - 1 ID=cds.g6132.t1;Parent=g6132.t1 NODE_759_length_18052_cov_42.618 . three_prime_UTR 11130 11238 . - . ID=g6132.t1.utr3p1;Parent=g6132.t1 #PROT g6132.t1 g6132 MTKEHVAPEVPSEHQLAQKWDRCITNFIVQAGTGVAVGAVLSVLLFKKQGWPIALSLGAGAGMAYRDCQYDFANPDLFHGKRVPKTATPGASATPAAQH* # PASA_UPDATE: g6134.t1, single gene model update, valid-1, status:[pasa:asmbl_9228,status:12], valid-1 NODE_759_length_18052_cov_42.618 . gene 16599 17909 . - . ID=g6134;Name=g6134.t1 NODE_759_length_18052_cov_42.618 . mRNA 16599 17909 . - . ID=g6134.t1;Parent=g6134;Name=g6134.t1 NODE_759_length_18052_cov_42.618 . five_prime_UTR 17795 17909 . - . ID=g6134.t1.utr5p1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . exon 17792 17909 . - . ID=g6134.t1.exon1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . CDS 17792 17794 . - 0 ID=cds.g6134.t1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . exon 17515 17653 . - . ID=g6134.t1.exon2;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . CDS 17515 17653 . - 0 ID=cds.g6134.t1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . exon 17271 17302 . - . ID=g6134.t1.exon3;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . CDS 17271 17302 . - 2 ID=cds.g6134.t1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . exon 16599 17080 . - . ID=g6134.t1.exon4;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . CDS 16871 17080 . - 0 ID=cds.g6134.t1;Parent=g6134.t1 NODE_759_length_18052_cov_42.618 . three_prime_UTR 16599 16870 . - . ID=g6134.t1.utr3p1;Parent=g6134.t1 #PROT g6134.t1 g6134 MGLERPHLFYHHGGYLGNVHSLYDASYNRHDKQLDGGTILPSVSPTPQKDSRDPIKMRESWQDRRNCEPLTTITRLAFGTQPTLPAIDRNITRRTITLESPPYVRSLELRKGMQCTRSPLVKKGTHI* # ORIGINAL: g6133.t1 original gene structure, not modified by PASA NODE_759_length_18052_cov_42.618 AUGUSTUS gene 12684 16341 . + . ID=g6133;Name=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS mRNA 12684 16341 . + . ID=g6133.t1;Parent=g6133;Name=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 12684 12825 . + . ID=g6133.t1.exon1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 12684 12825 . + 0 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 12937 13188 . + . ID=g6133.t1.exon2;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 12937 13188 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 13376 13511 . + . ID=g6133.t1.exon3;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 13376 13511 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 13724 13829 . + . ID=g6133.t1.exon4;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 13724 13829 . + 1 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 13992 14112 . + . ID=g6133.t1.exon5;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 13992 14112 . + 0 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 14305 14448 . + . ID=g6133.t1.exon6;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 14305 14448 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 14870 15038 . + . ID=g6133.t1.exon7;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 14870 15038 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 15212 15303 . + . ID=g6133.t1.exon8;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 15212 15303 . + 1 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 15435 15657 . + . ID=g6133.t1.exon9;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 15435 15657 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 15872 15969 . + . ID=g6133.t1.exon10;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 15872 15969 . + 1 ID=cds.g6133.t1;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 16208 16341 . + . ID=g6133.t1.exon11;Parent=g6133.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 16208 16341 . + 2 ID=cds.g6133.t1;Parent=g6133.t1 #PROT g6133.t1 g6133 MVCGMWQLSRRAANPCRRLLFARHATYAAAGGDPATIYALSSGPGKAGISIVRVSGPRAADSLLLLTGKRLKGTANVDGDSHVHNTQTPTAMPHPAIPSLQLPPPRKAVTRRIVDAETGETIDRGIVLWFPAPASATGEDVCEFHVHGGTAVVRGVLSALSKVPGLRMADPGDFAKRAFFNGKIDLTSAEGLADLINAETEAQRKQALRQMSGDLGRLYNGWANRLLTALAHVEAVIDFSEDADIDDGVLETELGVVREIDASIRKHLSDGRRGERLRNGVHASIGGPPNVGKSSLLNALCQRPAAIVSPIAGTTRDVVDVALNVRGFPLLLSDTAGLRSSPSDVVETEGIRRARERIRDSDVRIWVVDASANASSDDAEYCIDQVEDAAATTQDKCDQVMEFVVCNKIDLFGESGQALSALSSKDCVPQHLRHFPLFPVSCVTGDGIDAFVDALGNALRTKCEAGDGATEPGLTQARHREALMHCQSALAMALEHSADVVVAAEAMRAAIRHLGRITGRVNVEAILDVIFRDFCIGK* # ORIGINAL: g6130.t1 original gene structure, not modified by PASA NODE_759_length_18052_cov_42.618 AUGUSTUS gene 7552 9971 . - . ID=g6130;Name=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS mRNA 7552 9971 . - . ID=g6130.t1;Parent=g6130;Name=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 9852 9971 . - . ID=g6130.t1.exon1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 9852 9971 . - 0 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 9566 9632 . - . ID=g6130.t1.exon2;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 9566 9632 . - 0 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 9241 9285 . - . ID=g6130.t1.exon3;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 9241 9285 . - 2 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 8816 8919 . - . ID=g6130.t1.exon4;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 8816 8919 . - 2 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 8441 8591 . - . ID=g6130.t1.exon5;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 8441 8591 . - 0 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 8142 8266 . - . ID=g6130.t1.exon6;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 8142 8266 . - 2 ID=cds.g6130.t1;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS exon 7552 7839 . - . ID=g6130.t1.exon7;Parent=g6130.t1 NODE_759_length_18052_cov_42.618 AUGUSTUS CDS 7552 7839 . - 0 ID=cds.g6130.t1;Parent=g6130.t1 #PROT g6130.t1 g6130 MSSVVRQLLGPVCAGMVAPARARVATVIGGESSLALRLAGGRAYHSVGMQLPRIEKYRKENEEFLREKLAAGPYVAPAVHAWVTSLSGERLNMIELDASVFAAAPRIDIMHKVVVWQRAKRRAGTASTKTKGEVRGGGRKPTPQKGSGRARQGSIRNPHMYKGGVALGPKPRDWSHGLPSQVRKMGLRSALSIKYAQGDLHIVDTVDLESPRTNPLARDLMERGWESVVLVSGDPLPNNLRLASGNIPACLAMSVRGLNVYDVLNFRKLVLSVDALNYITDLLKDTRRQTPSSESSPSA* # PASA_UPDATE: g6131.t1, single gene model update, valid-1, status:[pasa:asmbl_9231,status:3], valid-1 NODE_759_length_18052_cov_42.618 . gene 10429 11129 . + . ID=g6131;Name=g6131.t1 NODE_759_length_18052_cov_42.618 . mRNA 10429 11129 . + . ID=g6131.t1;Parent=g6131;Name=g6131.t1 NODE_759_length_18052_cov_42.618 . five_prime_UTR 10429 10490 . + . ID=g6131.t1.utr5p1;Parent=g6131.t1 NODE_759_length_18052_cov_42.618 . exon 10429 10677 . + . ID=g6131.t1.exon1;Parent=g6131.t1 NODE_759_length_18052_cov_42.618 . CDS 10491 10677 . + 0 ID=cds.g6131.t1;Parent=g6131.t1 NODE_759_length_18052_cov_42.618 . exon 10864 11129 . + . ID=g6131.t1.exon2;Parent=g6131.t1 NODE_759_length_18052_cov_42.618 . CDS 10864 11000 . + 2 ID=cds.g6131.t1;Parent=g6131.t1 NODE_759_length_18052_cov_42.618 . three_prime_UTR 11001 11129 . + . ID=g6131.t1.utr3p1;Parent=g6131.t1 #PROT g6131.t1 g6131 MATLETSDEANLWDSLDNWLSWIDKNPSEFFGYMFVFLAPLLLLSAFLSYKMLQLIDTEESAVEKRRPAPGRDKGTASTVASASASTGSAPSPPSSAPKKTKSKKAD* # ORIGINAL: g10234.t1 original gene structure, not modified by PASA NODE_5143_length_999_cov_29.671 AUGUSTUS gene 18 999 . + . ID=g10234;Name=g10234.t1 NODE_5143_length_999_cov_29.671 AUGUSTUS mRNA 18 999 . + . ID=g10234.t1;Parent=g10234;Name=g10234.t1 NODE_5143_length_999_cov_29.671 AUGUSTUS exon 18 999 . + . ID=g10234.t1.exon1;Parent=g10234.t1 NODE_5143_length_999_cov_29.671 AUGUSTUS CDS 18 999 . + 0 ID=cds.g10234.t1;Parent=g10234.t1 #PROT g10234.t1 g10234 MIKSEVASRTKTTQEGTVVTYEDIGFYEKMFNPDFSIRYNITNELAIISILKKAFPSLDVIVSHFEMALFATMLNNYMCVYNMFVANIAEGRFVLFGREIPVSVEDRTLIKHAFNATTNTLCHRLENVKLAPLSTEVVQFAQILKIKPAPIASTNTELIPLRLVGPAYMNDAELSAKFYEFVDRLGASSSDATVGEFKSKIHTVAIKRTTTKRSAIANPEYERFEKQLGVLKDIGADKEVAALMKNAPPRDIFHEETSSAVEVKQINQTSKPLSTLYIREKDMFKLSGCLDSFTDKRHIMARLGMSHKLGILLYGEPGTGKTSSIMA # PASA_UPDATE: g9818.t1, single gene model update, valid-1, status:[pasa:asmbl_6196,status:12], valid-1 NODE_3547_length_3234_cov_39.774 . gene 1334 3216 . + . ID=g9818;Name=g9818.t1 NODE_3547_length_3234_cov_39.774 . mRNA 1334 3216 . + . ID=g9818.t1;Parent=g9818;Name=g9818.t1 NODE_3547_length_3234_cov_39.774 . exon 1334 1504 . + . ID=g9818.t1.exon1;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . CDS 1334 1504 . + 0 ID=cds.g9818.t1;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . exon 1600 1686 . + . ID=g9818.t1.exon2;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . CDS 1600 1686 . + 0 ID=cds.g9818.t1;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . exon 1813 3216 . + . ID=g9818.t1.exon3;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . CDS 1813 3120 . + 0 ID=cds.g9818.t1;Parent=g9818.t1 NODE_3547_length_3234_cov_39.774 . three_prime_UTR 3121 3216 . + . ID=g9818.t1.utr3p1;Parent=g9818.t1 #PROT g9818.t1 g9818 MVSSDMILAPTKATLKVIIMMLCGYVLAKKKILDGPVSKKLGILLVNCLIPALLFAKITEVFVGDNHISDYAGLFLFGPILVAAGMALGLIVHAIAGFPKGYRRFTVACVAIGNSRSMPLALIGSLAYSVPALMKDDTDSPASVEKRGITSVLMYNVVTTVITWTVGYYLLMPYNPADNNGDAVAPTTGAEDGTKPLGCVKERIHEGRRYSSLPVVIVHQTIPFASEKRASVGAPSRTRSRTVSISSEGGPMSRRGSTLESDTSLATPLIASADDSDDDFHARPPPPPSCWDCMSPRRVQSACVDAWARTTAALSACFQKLPLPLQSIALRIYESINAPVVASALGIAYGFIPGAADLIHIPKTCGAGGGCSSPLDFVGSTLNTLGAGVVPLMTILTGAAVAKGISTRPPAQGEEALDTASVPQGMSRWLLVCVCVARLAIMPVIGCALAILGRKVGLLQDDPLTVFVVMLQSCTPTAMQLNVIASSVGSKENDVALVLFVQSIAAILSVTVAVTVFIMFI* # PASA_UPDATE: g2769.t1, single gene model update, valid-1, status:[pasa:asmbl_7343,status:12], valid-1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . gene 377 1572 . + . ID=g2769;Name=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . mRNA 377 1572 . + . ID=g2769.t1;Parent=g2769;Name=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . five_prime_UTR 377 378 . + . ID=g2769.t1.utr5p1;Parent=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . exon 377 545 . + . ID=g2769.t1.exon1;Parent=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . CDS 379 545 . + 0 ID=cds.g2769.t1;Parent=g2769.t1;5_prime_partial=true NODE_4469_length_1572_cov_42.4623_potentialcontaminant . exon 677 863 . + . ID=g2769.t1.exon2;Parent=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . CDS 677 863 . + 1 ID=cds.g2769.t1;Parent=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . exon 1027 1572 . + . ID=g2769.t1.exon3;Parent=g2769.t1 NODE_4469_length_1572_cov_42.4623_potentialcontaminant . CDS 1027 1572 . + 0 ID=cds.g2769.t1;Parent=g2769.t1;3_prime_partial=true #PROT g2769.t1 g2769 PRLAYDDESDARHGHGIRIVATHTNTHTHSYAKQDDRRTLCRGLHDKHRLEVADPKHRYGKLLSEYHRVWAQGHVEGSHGDFFEWLDRGTGRQLTLPHAPRAMLEASRVTYLADADREKYRLIVRGGRLSSARTGRTFGSDDSTQSIFVMGPDGSLYAGLKEVGKFHHSSFLCGGMVKFAGTWTVRQGILLEIGPHSGHYRPTAADLLGFLEALDVAGLDLSHARLCVKDTCVKKEVVVGGLSFARVHGSIASALLQRWRRHDRTLSAPPVPLATGATTTATATAATAADSDGTELDACP # PASA_UPDATE: g3138.t1, single gene model update, valid-1, status:[pasa:asmbl_1076,status:12],[pasa:asmbl_1077,status:12],[pasa:asmbl_1078,status:12], valid-1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . gene 655 6942 . - . ID=g3138;Name=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . mRNA 655 6942 . - . ID=g3138.t1;Parent=g3138;Name=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 6136 6942 . - . ID=g3138.t1.exon1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 6136 6942 . - 0 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 5282 5889 . - . ID=g3138.t1.exon2;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 5282 5889 . - 0 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 4953 5130 . - . ID=g3138.t1.exon3;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 4953 5130 . - 1 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 4561 4772 . - . ID=g3138.t1.exon4;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 4561 4772 . - 0 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 4019 4300 . - . ID=g3138.t1.exon5;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 4019 4300 . - 1 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 3276 3597 . - . ID=g3138.t1.exon6;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 3276 3597 . - 1 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 2788 3056 . - . ID=g3138.t1.exon7;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 2788 3056 . - 0 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 1289 2297 . - . ID=g3138.t1.exon8;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 1289 2297 . - 1 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . exon 655 1119 . - . ID=g3138.t1.exon9;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . CDS 862 1119 . - 0 ID=cds.g3138.t1;Parent=g3138.t1 NODE_1284_length_12411_cov_39.3699_potentialcontaminant . three_prime_UTR 655 861 . - . ID=g3138.t1.utr3p1;Parent=g3138.t1 #PROT g3138.t1 g3138 MHATDAMPPTLPADHVHSQQDAGCLDAPRISVNVLRSRAEDDGFAGCDSHHSPSKRRGNHAVASDHLSNAADALLALQSHAALVVLDCSGSVVTHASTNAAGALGCVADVSLGCTVEEVSRLFLRISSTFRSVFDEFARGAETTRAIIVHAADRPSPSNDSMLWCTMHRLFVRDDHCESSRDPPRLAARRAHAGGGRRAKGVRECIALEFEFPVTATGAPSLECSVTESAAARVVSGFTRDCFDELSLATAFASSLREITKFDRVAVCKFVTETTCEVVAESLTPAPATPLTPIHSLLFGASDFTLRGRLPADGALRSHHVIDALGTGAAVVSLQSRGCGQSACESDVAIEGDPTLSASSAEQHPHTAHTIGAESIAMSVVDALSQLHVAAMCPSGDHCALMGMLGARSEAVYPVLVDGLPWGLVVCHGTAAVHVTPPLRAAMARCVRLFGMDIERLAVIGGSREAGHERESETTLLRKAGSVSSVSSDASLTGFINRLVQLLPVYFEADGAAILHGGRMHSAGVTPTEQQVRELVSWLPRKSECGRPSNATLPLSPLAFTRDPHVIHLSAMKEHVTPLGSACTGVLAMHLPTNIWLLSFRRESPRIVRWGGSIAAGLHGAPSALALGEQPGEHAPRPDTLRGTCLPWTFGDAQRAASLRVRVVEEIAARLPSLESAVDSLRRELGQKSEFISTMRTPMNSMLGFLSLLSESGGLDAIQHSYVDNIKGSGEHLLSLINDILDLTRLESVPLDNTAFPLLSVAEECSNMFAPMCTKKGIDLIFETEDNIPDSLFIVSDKMKLKQLIINLLGNATKFTSEGHVALRIGCEVMGGSPLSSQRSSPPSSPSRECSEADRFVDAPTVVVSIVVEDTGCGIPEDSLRKIFEPFIQAHASDYGGTGLGLAISRRIAQAMGGDIVAESAVNSGTRFMFVCPFRIGTAPLLSRESSGAGDSTMGGFGALPRKRSSLRDSASGAAQCASPSGASRLVLQTSDAGVDPRPPAPHTATDTGGDTIFRQDSYSPTIAAQEAAVPRRRRSVSVVLPPSSSSVRDSYLLGGDNDIPETEGHARTRELLGLSPAACSGSTGPDPATERDLVQTPRTPSSSGLARSVSVTLDSPSQIAQSRSLDGGAMGLAFASQASAPFAATALKGENLSSWRRRFAGLRVLVVEDNSMNFKILNAILTKLAIQHDWAQNGLLALDCLKASTDEVPPRPYAVVMMDMVMPEMDGLVATRHIRNGEAGAMYTHVPIVALTANASSDDADACRQGGMDAFLSKPFSVDSLVSVLDMHVTSPGGAPRTGAGRHPLPPTPRTPS* # ORIGINAL: g13251.t1 original gene structure, not modified by PASA NODE_2155_length_7482_cov_51.5628 AUGUSTUS gene 2625 3926 . - . ID=g13251;Name=g13251.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS mRNA 2625 3926 . - . ID=g13251.t1;Parent=g13251;Name=g13251.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 2909 3926 . - . ID=g13251.t1.exon1;Parent=g13251.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 2909 3926 . - 0 ID=cds.g13251.t1;Parent=g13251.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 2625 2704 . - . ID=g13251.t1.exon2;Parent=g13251.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 2625 2704 . - 2 ID=cds.g13251.t1;Parent=g13251.t1 #PROT g13251.t1 g13251 MQREQNAEATTVMRENCDENEAEAAHQASTPALTTEELSRVVDYMRAKARSLSVVVGVFQRLALDEGFTSTPARLAWIRHLVLNPDALKHPITEFIWDMMEAYCELYMSHGLDKKAVGGTLARWALFCADMEATSYGASATTMWQHLLSKMADSGAPALTAHEPWIVRHNLIVAIQHEFYGLRGHGYVAIFCANTATGEGTTSSGHAHNPAAVNGERWPLPPTSTVLTVARHLTNLLRDDGTFARALHMTGWALFATLKDYDPSRRENFDIEFRIVSSFRAAKKAIDRENFPVYLKVVGEGNLCYFKMRCLPFMAALDGEVKISLTTERVLDAVAVSKSVSGVVKGIHVTIVNKVLSTPGFEKIV* # ORIGINAL: g13250.t1 original gene structure, not modified by PASA NODE_2155_length_7482_cov_51.5628 AUGUSTUS gene 359 2376 . - . ID=g13250;Name=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS mRNA 359 2376 . - . ID=g13250.t1;Parent=g13250;Name=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 2218 2376 . - . ID=g13250.t1.exon1;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 2218 2376 . - 0 ID=cds.g13250.t1;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 1345 2043 . - . ID=g13250.t1.exon2;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 1345 2043 . - 0 ID=cds.g13250.t1;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 1018 1143 . - . ID=g13250.t1.exon3;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 1018 1143 . - 0 ID=cds.g13250.t1;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 359 679 . - . ID=g13250.t1.exon4;Parent=g13250.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 359 679 . - 0 ID=cds.g13250.t1;Parent=g13250.t1 #PROT g13250.t1 g13250 MKTVLMVAEKPSLASAISAILSGGQCTVRQGFTRGCNVHEWVGDFKGEAVRFKMTSVCGHIMSLDFEGRFNDWNATEPVELFQAPALKKEANPKMHMNRFLKSEAEGIDYLVLWLDCDREGENICFEVIDAVARSMRSADVGYDLESIGGCGDPTMAPAVFDLRASHVNLPHTGGNVEDAATQPGGSNRGRGRGRGADRDRGRGRGRGAGRGSSSPSIVTPSQSSRGGSAVTSSSSSSRGGNVRRPDTQTIFRAKFSAITETEIRHAMATLGSPNVYESLSVDARQELDLRIGCAFTRQQTKFFHGKYANLDSALISYGPCQTPTLGFCVERHDRIATFKPEDYWVLCAKVRHVSGRTVSLDWERRLTFDHVAAVNLEKALRQQQTAKVVDVASKTKTKPRPLALNTVGMLKAASQALSMGPHETMDLAERLYIQ # ORIGINAL: g13252.t1 original gene structure, not modified by PASA NODE_2155_length_7482_cov_51.5628 AUGUSTUS gene 5464 6632 . + . ID=g13252;Name=g13252.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS mRNA 5464 6632 . + . ID=g13252.t1;Parent=g13252;Name=g13252.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 5464 6066 . + . ID=g13252.t1.exon1;Parent=g13252.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 5464 6066 . + 0 ID=cds.g13252.t1;Parent=g13252.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS exon 6282 6632 . + . ID=g13252.t1.exon2;Parent=g13252.t1 NODE_2155_length_7482_cov_51.5628 AUGUSTUS CDS 6282 6632 . + 0 ID=cds.g13252.t1;Parent=g13252.t1 #PROT g13252.t1 g13252 MPTYKPTAHGKLFSGGCFVVIVSLMASHSSWKQTMGYTGESKVLDCILSLDGNHTIDRTSNLHIGNSVAGIKTATTTTTQYGKSGVHAGAATRAMSLAHVEVIETATRDELISALCVVGEREAAAAGYGATTGVLVLTDPNERLSEEMRAHPCYSLSGAVHRVVDFFGSSPLSTSLVPGVRPRDHLSMAPNAYNQFLGYYHEVADAPFPPPARKRQCVLWGKLRKYYSNDAMRTLVAALALLDVQSAAMGGQEYDISLVGVISDAHPSALTRQLGALWGSMRAAEGRTGRSRGGLRRIRFHGVMAPSEYKRLLGESR* # ORIGINAL: g8214.t1 original gene structure, not modified by PASA NODE_4421_length_1643_cov_54.0395 AUGUSTUS gene 334 912 . + . ID=g8214;Name=g8214.t1 NODE_4421_length_1643_cov_54.0395 AUGUSTUS mRNA 334 912 . + . ID=g8214.t1;Parent=g8214;Name=g8214.t1 NODE_4421_length_1643_cov_54.0395 AUGUSTUS exon 334 912 . + . ID=g8214.t1.exon1;Parent=g8214.t1 NODE_4421_length_1643_cov_54.0395 AUGUSTUS CDS 334 912 . + 0 ID=cds.g8214.t1;Parent=g8214.t1 #PROT g8214.t1 g8214 DSPTDVGYRYSREDGSIEPKLQSVLFEAKGGEHFVRSIGKHPYASPPPNRPSNGFGKSGDRTVPYASLSWAHEWHLGNKEDVRVTKKPATVIEYYDHPVGKWGEQFVLSIMNTAEPEHTLFESEGEGPNGETWHTTVIEVDKMGHREIVKEGFTLKLLGDLFSRKFIETFANKLDFRVGAVIKSFGGTDSNS* # ORIGINAL: g2221.t1 original gene structure, not modified by PASA NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS gene 185 3942 . - . ID=g2221;Name=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS mRNA 185 3942 . - . ID=g2221.t1;Parent=g2221;Name=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 3866 3942 . - . ID=g2221.t1.exon1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 3866 3942 . - 0 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 3370 3464 . - . ID=g2221.t1.exon2;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 3370 3464 . - 1 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 2937 3050 . - . ID=g2221.t1.exon3;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 2937 3050 . - 2 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 2330 2496 . - . ID=g2221.t1.exon4;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 2330 2496 . - 2 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 2057 2133 . - . ID=g2221.t1.exon5;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 2057 2133 . - 0 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 1757 1905 . - . ID=g2221.t1.exon6;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 1757 1905 . - 1 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 1295 1542 . - . ID=g2221.t1.exon7;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 1295 1542 . - 2 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 903 1061 . - . ID=g2221.t1.exon8;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 903 1061 . - 0 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 667 730 . - . ID=g2221.t1.exon9;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 667 730 . - 0 ID=cds.g2221.t1;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS exon 185 394 . - . ID=g2221.t1.exon10;Parent=g2221.t1 NODE_3237_length_3942_cov_33.2361_potentialcontaminant AUGUSTUS CDS 185 394 . - 2 ID=cds.g2221.t1;Parent=g2221.t1 #PROT g2221.t1 g2221 SSAIGTYTLSYSVVDRAGNRASVNRFVAVVDIDECEVTRTGYGRFRCPPNARCINRQGTFDCLCADGYIKSGAFCVDVTPPVISLDVSDASVPQYGTYHVRGASAYDNEDGDISMAVHVTGAVDISTPGLYTITYMVKDSAGNAANAMSYTVSVEDIDECSASVPNGRSNDCSEDAGCENTIGSFSCVCNDGFAGNGRTCIDVLPPTLTLKGGDVRMQQGQAFADPGVTANDNADGDLTGSVRTHGAVNTMIPGTYHVSYTVADAAGNAASAARTVYVDDMDECVAYRRSPDGSLTAGGCDQRTSCVNTVGSFYCTACPMGFTGSGTTGCKATVCDYEEYWSDSCGLLGSASARTCSRGGELVNENACLMSTSGSRICPNTYLQCQPLCRRVLNAPCNCGTGQYGSEGCDAPSAAPCSTITCPTDSVCVNGVSEGKCHCNYGFAMDASTGLCI # ORIGINAL: g12330.t1 original gene structure, not modified by PASA NODE_3829_length_2665_cov_38.9154 AUGUSTUS gene 101 2245 . + . ID=g12330;Name=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS mRNA 101 2245 . + . ID=g12330.t1;Parent=g12330;Name=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 101 247 . + . ID=g12330.t1.exon1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 101 247 . + 2 ID=cds.g12330.t1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 632 720 . + . ID=g12330.t1.exon2;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 632 720 . + 2 ID=cds.g12330.t1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 824 928 . + . ID=g12330.t1.exon3;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 824 928 . + 0 ID=cds.g12330.t1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 1360 1479 . + . ID=g12330.t1.exon4;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 1360 1479 . + 0 ID=cds.g12330.t1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 1787 1960 . + . ID=g12330.t1.exon5;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 1787 1960 . + 0 ID=cds.g12330.t1;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS exon 2081 2245 . + . ID=g12330.t1.exon6;Parent=g12330.t1 NODE_3829_length_2665_cov_38.9154 AUGUSTUS CDS 2081 2245 . + 0 ID=cds.g12330.t1;Parent=g12330.t1 #PROT g12330.t1 g12330 SDCIKYLREHGLELHTLGKSEAPFNFSYDSSTGSLVWQAPKDKKHQTTIALASIKELRYGAHAAQTKAAAAKIKHLPKGASVDNLIVLIHGDKFESVVFFSETQEELHIFKSADMWSQADKNGDNQLDFEEICSLMHRLNANVSRENLKRLYTRANKDAASGSKTLGFDEFCDFYREVSARSEINDIMKQFTDGDCLTAKQLQHFLETQQSEKRSLAECEKLIDEYGKNSADPPGLLSLEGFTALLVGPLGSAVNTAHLSVGWRL* # PASA_UPDATE: g13416.t1, single gene model update, valid-1, status:[pasa:asmbl_2476,status:12],[pasa:asmbl_2477,status:12], valid-1 NODE_1733_length_9477_cov_39.1483 . gene 122 1789 . + . ID=g13416;Name=g13416.t1 NODE_1733_length_9477_cov_39.1483 . mRNA 122 1789 . + . ID=g13416.t1;Parent=g13416;Name=g13416.t1 NODE_1733_length_9477_cov_39.1483 . five_prime_UTR 122 122 . + . ID=g13416.t1.utr5p1;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . exon 122 323 . + . ID=g13416.t1.exon1;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . CDS 123 323 . + 0 ID=cds.g13416.t1;Parent=g13416.t1;5_prime_partial=true NODE_1733_length_9477_cov_39.1483 . exon 614 785 . + . ID=g13416.t1.exon2;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . CDS 614 785 . + 0 ID=cds.g13416.t1;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . exon 1075 1789 . + . ID=g13416.t1.exon3;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . CDS 1075 1226 . + 2 ID=cds.g13416.t1;Parent=g13416.t1 NODE_1733_length_9477_cov_39.1483 . three_prime_UTR 1227 1789 . + . ID=g13416.t1.utr3p1;Parent=g13416.t1 #PROT g13416.t1 g13416 IDAEDPDVNDYHFLPETAALSERLRSCLQESEEIPKDFSQLFNHSLYKLDTSVIPDAVKAFEHLRIKHEPLTLITPQFETPLPPLQPAVFPPTFRELPPPSLDLFDLDEQFSSERVRLAQITNKCNDDDLEYYVRECGEILGVAQKLPSESRDGKHLLEYIFRQLVDFKKFNQD* # ORIGINAL: g13417.t1 original gene structure, not modified by PASA NODE_1733_length_9477_cov_39.1483 AUGUSTUS gene 2326 4625 . + . ID=g13417;Name=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS mRNA 2326 4625 . + . ID=g13417.t1;Parent=g13417;Name=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 2326 2481 . + . ID=g13417.t1.exon1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 2326 2481 . + 0 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 2682 2724 . + . ID=g13417.t1.exon2;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 2682 2724 . + 0 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 2846 2928 . + . ID=g13417.t1.exon3;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 2846 2928 . + 2 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 3302 3446 . + . ID=g13417.t1.exon4;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 3302 3446 . + 0 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 3680 3826 . + . ID=g13417.t1.exon5;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 3680 3826 . + 2 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 4092 4226 . + . ID=g13417.t1.exon6;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 4092 4226 . + 2 ID=cds.g13417.t1;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 4465 4625 . + . ID=g13417.t1.exon7;Parent=g13417.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 4465 4625 . + 2 ID=cds.g13417.t1;Parent=g13417.t1 #PROT g13417.t1 g13417 MADSSVLIKDACKTPLALEHGMTDGHGPHPRKHHHHHTHQHGNLNHSHQHHKGRSVHTVAAGLPIPSDVPADVKDEVARLFRQIFHVTCTKSEQRIPAAFEAKVTRWFSRPAFVEVPADASDDVRREAVEADALERAKTQLIVKIHNDWTLDQTVFNALRASRPVNNASHAPSASAVSDCDFCRPHDFTAFDVFGRIEKDTCITASNVAKYDGCHGMIVFKEHDPLAITKELTRDMVDVAREWYTRASAHFGSDLCYPTLTWNTLAKGGASQHHGHCHMLLGEGRWDSR* # ORIGINAL: g13418.t1 original gene structure, not modified by PASA NODE_1733_length_9477_cov_39.1483 AUGUSTUS gene 6128 9135 . - . ID=g13418;Name=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS mRNA 6128 9135 . - . ID=g13418.t1;Parent=g13418;Name=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 8967 9135 . - . ID=g13418.t1.exon1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 8967 9135 . - 0 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 8712 8837 . - . ID=g13418.t1.exon2;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 8712 8837 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 8358 8483 . - . ID=g13418.t1.exon3;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 8358 8483 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 7973 8101 . - . ID=g13418.t1.exon4;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 7973 8101 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 7448 7606 . - . ID=g13418.t1.exon5;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 7448 7606 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 7072 7200 . - . ID=g13418.t1.exon6;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 7072 7200 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 6514 6645 . - . ID=g13418.t1.exon7;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 6514 6645 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS exon 6128 6264 . - . ID=g13418.t1.exon8;Parent=g13418.t1 NODE_1733_length_9477_cov_39.1483 AUGUSTUS CDS 6128 6264 . - 2 ID=cds.g13418.t1;Parent=g13418.t1 #PROT g13418.t1 g13418 MFVLDDCLSFLLEFVSRGKPPITGAYDDDEEEQAAYEVFADLRRRIAVVVGAIVSEDESMRTALAREDVISQVMSWLTDGDDKVRAAAAMTLGNFARSDENCARLLTVDGLLDGLFAAAESAEAIEQHSALGAIKNLCIPVGNRELLVRHFNLLAKVRPQLQSAHPPIRFLAISISRLLCTASESNVRALLAMRSSDSDSDFLSEIAERGRASDDAGIKLEAGRVMAAVMRVGKDKAAYDALLRASSAFSLVAGLVVCQHPSLHNEGIVALCMAHALDEDGALAKAIDKELGTLLQSASRIVGDAPAPEIAMNAAMLLENMSTAAVISRLSTDEEASIRTELARSLDGDKLKQDASLWERVKRVSSAF* # PASA_UPDATE: g1739.t1, single gene model update, valid-1, status:[pasa:asmbl_3283,status:12], valid-1 NODE_2017_length_8084_cov_36.0076 . gene 94 2169 . + . ID=g1739;Name=g1739.t1 NODE_2017_length_8084_cov_36.0076 . mRNA 94 2169 . + . ID=g1739.t1;Parent=g1739;Name=g1739.t1 NODE_2017_length_8084_cov_36.0076 . five_prime_UTR 94 95 . + . ID=g1739.t1.utr5p1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . exon 94 200 . + . ID=g1739.t1.exon1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . CDS 96 200 . + 0 ID=cds.g1739.t1;Parent=g1739.t1;5_prime_partial=true NODE_2017_length_8084_cov_36.0076 . exon 616 734 . + . ID=g1739.t1.exon2;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . CDS 616 734 . + 0 ID=cds.g1739.t1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . exon 1016 1159 . + . ID=g1739.t1.exon3;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . CDS 1016 1159 . + 1 ID=cds.g1739.t1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . exon 1389 1409 . + . ID=g1739.t1.exon4;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . CDS 1389 1409 . + 1 ID=cds.g1739.t1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . exon 1694 2169 . + . ID=g1739.t1.exon5;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . CDS 1694 1793 . + 1 ID=cds.g1739.t1;Parent=g1739.t1 NODE_2017_length_8084_cov_36.0076 . three_prime_UTR 1794 2169 . + . ID=g1739.t1.utr3p1;Parent=g1739.t1 #PROT g1739.t1 g1739 FVDLYVKHLLVDSVALQFASFNRGFATVCHGPVIELLRPKELEMIICGSPEYDFAEFETSTTYANGYHSAHPVIKLFWTVFHSLSREDKRRLLAFATGSDRVPIEGFAGLKFVIQRSGPDSERLPVAHTCFNVLDLPEYATEAKLRYKLMLSISHSEGFHLA* # ORIGINAL: g1741.t1 original gene structure, not modified by PASA NODE_2017_length_8084_cov_36.0076 AUGUSTUS gene 6002 7600 . + . ID=g1741;Name=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS mRNA 6002 7600 . + . ID=g1741.t1;Parent=g1741;Name=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 6002 6049 . + . ID=g1741.t1.exon1;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 6002 6049 . + 0 ID=cds.g1741.t1;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 6185 6422 . + . ID=g1741.t1.exon2;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 6185 6422 . + 0 ID=cds.g1741.t1;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 6607 6719 . + . ID=g1741.t1.exon3;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 6607 6719 . + 2 ID=cds.g1741.t1;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 7346 7600 . + . ID=g1741.t1.exon4;Parent=g1741.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 7346 7600 . + 0 ID=cds.g1741.t1;Parent=g1741.t1 #PROT g1741.t1 g1741 MTEIKKDAPSKPSYVSIPDNFPGYPLDVFSIPQHYENDVSSILIPHGLILDRIEKLAHEIVKDMGDNHLVIVCVLKGAHAVFADILEVIKRINSSDTSKPLSIDFIRVKSYHNEHSTGEVTISGGDLESFRGKDIIDTGLTMTSLLKKLADYGAAKLRVASLLVKRTDKSNGYRPDYTGFEIPDAFVVGYCLDYNEFFRDMPHICIISETGRVKYAS* # ORIGINAL: g1740.t1 original gene structure, not modified by PASA NODE_2017_length_8084_cov_36.0076 AUGUSTUS gene 2974 5172 . - . ID=g1740;Name=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS mRNA 2974 5172 . - . ID=g1740.t1;Parent=g1740;Name=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 5086 5172 . - . ID=g1740.t1.exon1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 5086 5172 . - 0 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 4809 4883 . - . ID=g1740.t1.exon2;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 4809 4883 . - 0 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 4549 4612 . - . ID=g1740.t1.exon3;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 4549 4612 . - 0 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 4247 4306 . - . ID=g1740.t1.exon4;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 4247 4306 . - 2 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 3952 4049 . - . ID=g1740.t1.exon5;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 3952 4049 . - 2 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 3506 3620 . - . ID=g1740.t1.exon6;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 3506 3620 . - 0 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 3273 3402 . - . ID=g1740.t1.exon7;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 3273 3402 . - 2 ID=cds.g1740.t1;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS exon 2974 3010 . - . ID=g1740.t1.exon8;Parent=g1740.t1 NODE_2017_length_8084_cov_36.0076 AUGUSTUS CDS 2974 3010 . - 1 ID=cds.g1740.t1;Parent=g1740.t1 #PROT g1740.t1 g1740 MAASDGRSVVFRSGNVLEVRRPAQDTRDEVKRYLQALIQEASSTANGESTANDSKLYLGASDHIRGEERSTLAINVKIFLLAEMNPLYISDAVRECLECLGTDKLDNVHVSLPVDASDSHDQFAAVWKIHPSVNHVNLQSCCVMPKDLVDYAKTAGIQLLTHADQREVLSKEAFDAAVGGSSGLPSPLAPTWLVRYQATYPSRGVIASKGYILSAAVGSGN* # PASA_UPDATE: g2233.t1, single gene model update, valid-1, status:[pasa:asmbl_5447,status:12], valid-1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . gene 1510 4312 . + . ID=g2233;Name=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . mRNA 1510 4312 . + . ID=g2233.t1;Parent=g2233;Name=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 1510 1850 . + . ID=g2233.t1.exon1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 1510 1850 . + 0 ID=cds.g2233.t1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 2031 2219 . + . ID=g2233.t1.exon2;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 2031 2219 . + 1 ID=cds.g2233.t1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 2456 2829 . + . ID=g2233.t1.exon3;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 2456 2829 . + 1 ID=cds.g2233.t1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 3000 3302 . + . ID=g2233.t1.exon4;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 3000 3302 . + 2 ID=cds.g2233.t1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 3684 3804 . + . ID=g2233.t1.exon5;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 3684 3804 . + 2 ID=cds.g2233.t1;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . exon 4030 4312 . + . ID=g2233.t1.exon6;Parent=g2233.t1 NODE_3028_length_4505_cov_34.8655_potentialcontaminant . CDS 4030 4312 . + 1 ID=cds.g2233.t1;Parent=g2233.t1;3_prime_partial=true #PROT g2233.t1 g2233 MASTFERPQNEAFAKMATFEIEFHTTAESSQSGCQLSTLYVSLIRKDGSHTPKQPINNEYQYGADNQNFRRGNVDRFVFQTEDVRQEELAFIEISRSDEETKQSMRDWHVDHVRLLNMRHHNTSWRCTRHDWMRENEGTRVTLPVDSGNPHGFDDTLPAGTLMGPCISIVGVTREKWQYSVLIVYEDWSECKDGSLIFNGTPHAPDRVIPFLGRVICYYYVDVDLTASGTYVPYQTPDGRTYEIHTPAIDANPSIVFVSCSGTSAASRLSKLYWDLPTQHSLWTHLCAQSKRDNADIMLMGGDQVYTDPLWGIKGLQQWVALDDDVQKESDLKKRAPFSHEMRDHLTLFLFDLHCRRWSYPPMRMGLATVPSVCMWDDHDIFDGWGSYPAEMQACPVFQGIYGVTRDFFEYFQLKIAPQTRARVTWTTQHKLMKQLPSGEMLTYTDKAHPGTSIVGHIGAIPRDNFTFSFRIGRVAFLILDLRSERCLGHVMHPGTWDALWTQFAGEGPWSNVEHIMVLSSVPVLWVRFSAMEKMLE # ORIGINAL: g3786.t1 original gene structure, not modified by PASA NODE_308_length_27426_cov_39.7763 AUGUSTUS gene 156 4909 . - . ID=g3786;Name=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS mRNA 156 4909 . - . ID=g3786.t1;Parent=g3786;Name=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 4895 4909 . - . ID=g3786.t1.exon1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 4895 4909 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 3877 4674 . - . ID=g3786.t1.exon2;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 3877 4674 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 2948 3678 . - . ID=g3786.t1.exon3;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 2948 3678 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 2114 2590 . - . ID=g3786.t1.exon4;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 2114 2590 . - 1 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 1826 1954 . - . ID=g3786.t1.exon5;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 1826 1954 . - 1 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 1579 1652 . - . ID=g3786.t1.exon6;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 1579 1652 . - 1 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 1092 1312 . - . ID=g3786.t1.exon7;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 1092 1312 . - 2 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 858 929 . - . ID=g3786.t1.exon8;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 858 929 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 564 647 . - . ID=g3786.t1.exon9;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 564 647 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 156 271 . - . ID=g3786.t1.exon10;Parent=g3786.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 156 271 . - 0 ID=cds.g3786.t1;Parent=g3786.t1 #PROT g3786.t1 g3786 METHEIVVNGNVQILSSNEAPVTLPATNGAADRLDSKATFTLSHASNKMELDRTTATTDDGIVRPNAGIASPPGSPHLQQPVPVSTTPKLIVKLNVTPSADKTATLPSSLGKIPKLSQRQQTSDGSTPASTHTATAHTHNSSRSTGDSYASQKSGGDSKSARRKADSSSSDFEDKRPDSTSTKTGNNDSTRRVKRKRVVDSEDEEDASESDDSNEGSSDASSDDDDDDDGDDDDEDAESSEDGSSDEDASSEESGTERSGKKSRSASQQLKKKTYKEDSDESDLDVEETSGNSSASGDDSHGATDTSMRIVESDYDDFAEERAPRAAKTKSALDRVRAQHGKGKKASSTKAAAAKKPASKKRKASDMLVPTRQRSANDTAIPIPHPAEGVVIEKILARRVPASSSHAVARSLSQSGHMKKGAVHAEVPISEQEFLVKYKGRAYIHNDWLRHAELGYDQRIRQMMQRFMLKHFPLFHEDDADALAEVFNPDYLVVERVIADAVNAYGTPVYLVKWRSLAYEECTWETEDDVGDHQKLSEYRSCRTFGAETDPAAARRGTAPLGVNDVQTFKEGHALRSYQVEGVRWLTWCFSQQRSCILADEMGLGKTIQTIAFLYHLHDRTRATGPYLVVGPLSTLPNWQREVETWTDMRAVVYHGNSVARRVLKDYEMVARNGAGQVVPGRYRFTILLTTYEMILSGCEDLKKIRWHSVVVDEAHRLKSREGRLHEALRAFKMEHKVLLTGTPLQNNVLELWSLLNFLNPEEYASKDAFISEFGDLKSEEQVNKLQALLKPLLLRRLKEDVETSIAPKEETIIEVELTPIQKQYYRAILEKNFSFLRKGCSKSNTPNLMNIMMELRKCCNHPFLIAGAEESIMGQQQQATGMVPGRSQMLHSLVNASGKMVLVD # PASA_UPDATE: g3788.t1, single gene model update, valid-1, status:[pasa:asmbl_5543,status:3], valid-1 NODE_308_length_27426_cov_39.7763 . gene 11066 13117 . + . ID=g3788;Name=g3788.t1 NODE_308_length_27426_cov_39.7763 . mRNA 11066 13117 . + . ID=g3788.t1;Parent=g3788;Name=g3788.t1 NODE_308_length_27426_cov_39.7763 . five_prime_UTR 11066 11555 . + . ID=g3788.t1.utr5p1;Parent=g3788.t1 NODE_308_length_27426_cov_39.7763 . exon 11066 11694 . + . ID=g3788.t1.exon1;Parent=g3788.t1 NODE_308_length_27426_cov_39.7763 . CDS 11556 11694 . + 0 ID=cds.g3788.t1;Parent=g3788.t1 NODE_308_length_27426_cov_39.7763 . exon 11815 13117 . + . ID=g3788.t1.exon2;Parent=g3788.t1 NODE_308_length_27426_cov_39.7763 . CDS 11815 12887 . + 2 ID=cds.g3788.t1;Parent=g3788.t1 NODE_308_length_27426_cov_39.7763 . three_prime_UTR 12888 13117 . + . ID=g3788.t1.utr3p1;Parent=g3788.t1 #PROT g3788.t1 g3788 MEGPVAISHLPMITAKRPRVGSNSHKDEKVTDRRGRNGVVRPIPKKGGAGGKGVWGKPGDELRGAVETLDRYDPNYDPAEYEPYELEETMITLSPSQRDLKIRSCIDEYFQNGVGSEVDEYLRNFEADCIPSDVVVKAVEMAYERHDPERELVSLLIAELAASNYISSEEIGKSFEQLLDTVDDTQLDTPDAPQLLARFIARAVADDCLPPSFLSIQLAHVDTFGPGAREATRTADVLLNMKHGLVRLDSVWGQGGGRRPVRQLRKKIVMLVKEFLNADDLAEAERCVRELNVPHFHHEIVYESVVCAIEGLERDREPIARLLKCLADSNLITPEQMRTGFERVIANLDDLVLDVPNAHRIFGQFVRSSVDAGYLAKSIFGNNPPRNRKRFVSEGDGGRFKYE* # PASA_UPDATE: g3787.t1, single gene model update, valid-1, status:[pasa:asmbl_5542,status:12], valid-1 NODE_308_length_27426_cov_39.7763 . gene 6825 8638 . - . ID=g3787;Name=g3787.t1 NODE_308_length_27426_cov_39.7763 . mRNA 6825 8638 . - . ID=g3787.t1;Parent=g3787;Name=g3787.t1 NODE_308_length_27426_cov_39.7763 . five_prime_UTR 8617 8638 . - . ID=g3787.t1.utr5p1;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . exon 8440 8638 . - . ID=g3787.t1.exon1;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . CDS 8440 8616 . - 0 ID=cds.g3787.t1;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . exon 8136 8232 . - . ID=g3787.t1.exon2;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . CDS 8136 8232 . - 0 ID=cds.g3787.t1;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . exon 6825 8040 . - . ID=g3787.t1.exon3;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . CDS 6854 8040 . - 2 ID=cds.g3787.t1;Parent=g3787.t1 NODE_308_length_27426_cov_39.7763 . three_prime_UTR 6825 6853 . - . ID=g3787.t1.utr3p1;Parent=g3787.t1 #PROT g3787.t1 g3787 MIGRFEQSTSVHGCDLSNAWAAINPPGGHYGYGRAILSYPSDCGLPVMSPALTYMSLLEGFASHAPPLIHSSNYQPNGELLWQQQRIAGHAKRPLLLTESTDDPSGRNEYDSVSSKRIRVEDANRYTNAAALEGMRNSAQMPQGVCGQPTGHGQALLVLPPPISWSKVTCETRKHKCQSSDRPSSTVCREWARSSKESHVKDVARKLVRRLHVDEVAMLQGFDPRWFDVPGITVNDRIAAIGNAVPPPVSRAVISSLCEIVAFTNRTTIDICAGAGGLALGSDAVGFEHLALVDVWDVSASILAHGIPQKAWRKEVVHLADVARFDYSPYAGRVGILSGGPPCQPFSSGSKRQLGQDDQRDVFRIVPDIVAALLPEAFVFENVPGLKADRNAAYFNHIVNRLKSPRDGPHYAVGFRVLNAVDYRVPQYRKRLFTIGIRGGTEADVEKVFARLEAKRHVGVPVTVGDVLLPDCLAGPWMSWPFDTLV* # PASA_UPDATE: g3790.t1, single gene model update, valid-1, status:[pasa:asmbl_5545,status:3], valid-1 NODE_308_length_27426_cov_39.7763 . gene 16687 21314 . + . ID=g3790;Name=g3790.t1 NODE_308_length_27426_cov_39.7763 . mRNA 16687 21314 . + . ID=g3790.t1;Parent=g3790;Name=g3790.t1 NODE_308_length_27426_cov_39.7763 . five_prime_UTR 16687 16806 . + . ID=g3790.t1.utr5p1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . exon 16687 17188 . + . ID=g3790.t1.exon1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . CDS 16807 17188 . + 0 ID=cds.g3790.t1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . exon 17432 18726 . + . ID=g3790.t1.exon2;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . CDS 17432 18726 . + 2 ID=cds.g3790.t1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . exon 18982 19343 . + . ID=g3790.t1.exon3;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . CDS 18982 19343 . + 0 ID=cds.g3790.t1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . exon 19804 21314 . + . ID=g3790.t1.exon4;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . CDS 19804 21205 . + 1 ID=cds.g3790.t1;Parent=g3790.t1 NODE_308_length_27426_cov_39.7763 . three_prime_UTR 21206 21314 . + . ID=g3790.t1.utr3p1;Parent=g3790.t1 #PROT g3790.t1 g3790 MKMQGYTSAHGHVRRGVLAAFLPGLLCMCTLLSWFPTADATGGASLAPSAPGYRESQLEGSLRPQVEDNGLTSRSMVLVVGDLRITLSTSRWTLQVEDAVTGELLLSQSKQFNGLISMGLYKELFDLGFLYEGYQIRVGSNLIWSHADEIESVTVDPESGNVTCSVRMHGLYARGVLRVTLHSFQRRQFSVSVRPSDSLFGKFNRISLGFDSPESEGFYGLGMRYTATNQRGRRVNAWSEEGSWSFGRLAPTSAVLRYPKGKGATYFPVPFFLSSLGYGFEIDSNYETHFDFASKGIFGTVFCAAVFVGFFLATLRSIHAIGAVALPRDRRSHKESADGGDVERDVTFMHGDGIIGVDIPTTACDTVFRGMGRCLLTPIRLLSACCCKCCCKCFRLVPSFGVLVAVYTVLLAARILLGFTDVLSSAPDLQFCIAAATYFALTRHTTQPSTLFVVVAFAAALSFGIAGGRAIDRNLITMVTESDATDMNLYFGETPSQSLRMFTDKTGRYPVPTKWLFGPWYMLRGSSIEEKPFGMSGADAAEAFVRRDIPLAQMMREVQFLPERPYDNQLDAIRAENAKYHSLGVKTTCYFNNFVHSRAFNNHSLAVYDEARRLGLLTKNKTGDPFSMHFHIGLEGAVIYIGGEQVAQFDFSNPAAVAFYQGLLLFAADLGYDGWKYDYGEYTPPDSLSFDGTPGDAMHNLYPVLYQQAAQSLFERIDANKTRPGYGPDHVFFVRSGYTGSQGVTPAVWTGDSCSDWTKAFGLPAHLVAMLNLGLSGVPVSGSDASGFVWILQPPPSFELNVRWVQLAAFSGLSEYMAGGFGLGAKTRILDTPAGVALYRRYAKLRTQLFPHIYAAAHEARDFGLPIMRHHLLDFPRDANALAVGSTQFMFGRGLLVAPVVESGLTTRRVYLPYVATSGAVWHDVSTRLQYDETDGRFRIARAAATAGKTAATYPPGTFVTVPAPLDSIPLFALGGTAVFLLDPAVDTVNDDIATSPLVTTMAQRAHVLHAWVWPNAFGVAAGVSYDGASLSVAPVVSNNSAPGAAVALQVRLENDSVPGRSIVAQTSVAVIPGATLSVEGIAMSASWRNVSGDAAAVPSWFYDADAGTLWTRQSMEYPLLLVECTVNAGVGGFSVANGAPCMSFV* # PASA_UPDATE: g3789.t1, single gene model update, valid-1, status:[pasa:asmbl_5544,status:12], valid-1 NODE_308_length_27426_cov_39.7763 . gene 13693 16433 . + . ID=g3789;Name=g3789.t1 NODE_308_length_27426_cov_39.7763 . mRNA 13693 16433 . + . ID=g3789.t1;Parent=g3789;Name=g3789.t1 NODE_308_length_27426_cov_39.7763 . five_prime_UTR 13693 13736 . + . ID=g3789.t1.utr5p1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 13693 13925 . + . ID=g3789.t1.exon1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 13737 13925 . + 0 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 14081 14223 . + . ID=g3789.t1.exon2;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 14081 14223 . + 0 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 14333 14449 . + . ID=g3789.t1.exon3;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 14333 14449 . + 1 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 14593 14622 . + . ID=g3789.t1.exon4;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 14593 14622 . + 1 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 14782 14957 . + . ID=g3789.t1.exon5;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 14782 14957 . + 1 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 15114 15178 . + . ID=g3789.t1.exon6;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 15114 15178 . + 2 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 15365 15439 . + . ID=g3789.t1.exon7;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 15365 15439 . + 0 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 15608 15714 . + . ID=g3789.t1.exon8;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 15608 15714 . + 0 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 15927 15956 . + . ID=g3789.t1.exon9;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 15927 15956 . + 1 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . exon 16130 16433 . + . ID=g3789.t1.exon10;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . CDS 16130 16196 . + 1 ID=cds.g3789.t1;Parent=g3789.t1 NODE_308_length_27426_cov_39.7763 . three_prime_UTR 16197 16433 . + . ID=g3789.t1.utr3p1;Parent=g3789.t1 #PROT g3789.t1 g3789 MKLAIAIFAACVALAVASPTMHSYEAIADHINSLEGLSWKAGHNPRFAGANFNNVRKLLGVLETPEEHKLPKANIKIAEAIPDTFDARTQWPDCASISLVRDQGACGSCWAFGAVEAISDRICIASKGAKQPLISAENLVSCCGLSCGMGCNGGYPESAWNYWKKTGLVTGGLFNTTQGCQPYTIASCEHHVTGPLPSCDSEEASTPKCVKSCESSYSVAYSSDLYFGASAYSVGSSDAEIQTEIMTNGPVEGAFTVYEDFPTYKSGVYKHTTGSELGGHAIRILGWGAENGQNYWLVANSWNPTWGDNGYFKIARGDCGINDGVVGGLAKL* # ORIGINAL: g3791.t1 original gene structure, not modified by PASA NODE_308_length_27426_cov_39.7763 AUGUSTUS gene 21806 27197 . - . ID=g3791;Name=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS mRNA 21806 27197 . - . ID=g3791.t1;Parent=g3791;Name=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 27093 27197 . - . ID=g3791.t1.exon1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 27093 27197 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 26045 26634 . - . ID=g3791.t1.exon2;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 26045 26634 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 25615 25750 . - . ID=g3791.t1.exon3;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 25615 25750 . - 1 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 25246 25335 . - . ID=g3791.t1.exon4;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 25246 25335 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 24692 24863 . - . ID=g3791.t1.exon5;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 24692 24863 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 24278 24444 . - . ID=g3791.t1.exon6;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 24278 24444 . - 2 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 23878 24038 . - . ID=g3791.t1.exon7;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 23878 24038 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 23526 23600 . - . ID=g3791.t1.exon8;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 23526 23600 . - 1 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 23162 23261 . - . ID=g3791.t1.exon9;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 23162 23261 . - 1 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 22874 22948 . - . ID=g3791.t1.exon10;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 22874 22948 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS exon 21806 22663 . - . ID=g3791.t1.exon11;Parent=g3791.t1 NODE_308_length_27426_cov_39.7763 AUGUSTUS CDS 21806 22663 . - 0 ID=cds.g3791.t1;Parent=g3791.t1 #PROT g3791.t1 g3791 MSPPRSKAPRMSFPFPLRSDPKMYPQDRPRTASSARPADNFTESPASRPNSAPAKRSQSAQSQRSRSPTAPTDSNSADFGILGSAMALNSHSPPETYDDVYHTHRQTQRPQSASRGKIPDAELFASGRLPGRPVKREEGGKAGKGGKGKASHVGFGEFVSEYNGKKVIRRPNYYEEEGVPDSFQGMLTTTPVTLRAHDEYTDAKNLSPIKAEIRRRHAHVRDAVTRIQAVFRGHSQRKRVKELKDDIDESVAIQRHFEALQAKEDNAKEEDAAAIIQRAYRHKKEKSLRAAAIKDYLRRVDAATVIQMRDKLRSEGNTAAVTIQRHYRGHLARRRVDGMRQARGAQDHSDASSGAGDDDDSSLKDGLREDAAATAIQRAYRRHRRRREEGEAALTIQSAFRGHRDRKRAKSIRNEMDEAALVIQRSYKSSVQRREGKKKRFLMKEFGHHKDGVTRLNHGSFGAAPASVIRDMRRWQDRWLEQPDEFYFNVLPKAMATSSAAVAGLINADAADVSMVDNATTAAVIVAQAVAQDFISGKCKPGDAILMTSHTYGAVDKVFRHYCERVGASIVIADIPFPVSSPDDVLKAIRGGIVKAKRTVRLAVIDHVSSVPSFVLPVRDIVTLCRACGVKEVFVDGAHAIGTVDVDVAAIGADYYTSNLHKWMFCSPSAAFLHVKPSASRQQLHHPIVSHNLGAGLPSECAWVGTRDYSALINVPSGIAFQRSIGGGDVAKRNHEMVTWAAQMLAGAWGTRLGSPVEMMSSLGMVALPESLSVCTASVADAMRASIRATKQLETVVCCVGGRGYVRLSAQIYNERDDYFLLRDVISDMCKARTEREAAAGE* # PASA_UPDATE: g3.t1, single gene model update, valid-1, status:[pasa:asmbl_1565,status:12], valid-1 NODE_1430_length_11398_cov_39.3007 . gene 144 3852 . + . ID=g3;Name=g3.t1 NODE_1430_length_11398_cov_39.3007 . mRNA 144 3852 . + . ID=g3.t1;Parent=g3;Name=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 144 346 . + . ID=g3.t1.exon1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 144 346 . + 0 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 782 859 . + . ID=g3.t1.exon2;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 782 859 . + 1 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 1055 1149 . + . ID=g3.t1.exon3;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 1055 1149 . + 1 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 1582 1707 . + . ID=g3.t1.exon4;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 1582 1707 . + 2 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 2154 2237 . + . ID=g3.t1.exon5;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 2154 2237 . + 2 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 2448 2529 . + . ID=g3.t1.exon6;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 2448 2529 . + 2 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 2735 2832 . + . ID=g3.t1.exon7;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 2735 2832 . + 1 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . exon 3068 3852 . + . ID=g3.t1.exon8;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . CDS 3068 3198 . + 2 ID=cds.g3.t1;Parent=g3.t1 NODE_1430_length_11398_cov_39.3007 . three_prime_UTR 3199 3852 . + . ID=g3.t1.utr3p1;Parent=g3.t1 #PROT g3.t1 g3 MISVPSMPNWDSAPRDLPLIQINRFREPPAFGPMCDLLWSDPLEDFGNEKNVDFFTHNNVRGCSYFYSYAAACAFLENNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSVITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTDMLVAILNICSDDELEDGEPEEDPSEAEKAARREVIKNKIMAIGKMARMFSVLREESENILHLKGLTSNNQLPVGVLSGGKAGIKNAITTFEEAKMLDRENERMPPPRGSVSEKPKSMLANFAGLNLKV* # ORIGINAL: g4.t1 original gene structure, not modified by PASA NODE_1430_length_11398_cov_39.3007 AUGUSTUS gene 4490 6293 . - . ID=g4;Name=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS mRNA 4490 6293 . - . ID=g4.t1;Parent=g4;Name=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 6122 6293 . - . ID=g4.t1.exon1;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 6122 6293 . - 0 ID=cds.g4.t1;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 5681 5816 . - . ID=g4.t1.exon2;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 5681 5816 . - 2 ID=cds.g4.t1;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 5305 5407 . - . ID=g4.t1.exon3;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 5305 5407 . - 1 ID=cds.g4.t1;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 4901 5022 . - . ID=g4.t1.exon4;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 4901 5022 . - 0 ID=cds.g4.t1;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 4490 4646 . - . ID=g4.t1.exon5;Parent=g4.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 4490 4646 . - 1 ID=cds.g4.t1;Parent=g4.t1 #PROT g4.t1 g4 MALLSTHRLGQIQAVSGLAFGSFLSLHLLNTFTAIVSQDAFDNAQLMLREYYQTPLIEAAVVGGAGLIHIASSVMIGRKREALAPTTVAKRDDWRLEVHRTTGYVLAICGTMHAIQMRLPAVLYDVKADFSGVAFTLDRWPLLAYPLYTSLGVCGVYHFLYGVRSALRRLWTGNGKIRVGRRFDAIVSIGCAGIVLAVGSFGGFFFPVRTLRYIEFYNMYRRILPLGWV* # ORIGINAL: g5.t1 original gene structure, not modified by PASA NODE_1430_length_11398_cov_39.3007 AUGUSTUS gene 7178 7915 . + . ID=g5;Name=g5.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS mRNA 7178 7915 . + . ID=g5.t1;Parent=g5;Name=g5.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS exon 7178 7915 . + . ID=g5.t1.exon1;Parent=g5.t1 NODE_1430_length_11398_cov_39.3007 AUGUSTUS CDS 7178 7915 . + 0 ID=cds.g5.t1;Parent=g5.t1 #PROT g5.t1 g5 MYNRMYIEDAQFRDEVRATIPVDRLVLLSFDRNLQDLSAFEEAHSARFPIACYSGRSCTASALSPLKGVHTVELSFTSESADFLAPLADAQVVRLVELHCFVRVAAFGKAKSVDINNGMVDLSGLIGIPRVRLVGGYTAPGTRIQDISPLRLARFLELCDMREVKDLSCLECAREVVIHECPRIITLPPTAHLRAFTWHNSPLTPIPPELGRLRFLDLSSSHDLTEVSAARNVHELILRQWRFAA* # PASA_UPDATE: g6.t1, single gene model update, valid-1, status:[pasa:asmbl_1566,status:12], valid-1 NODE_1430_length_11398_cov_39.3007 . gene 9589 11171 . - . ID=g6;Name=g6.t1 NODE_1430_length_11398_cov_39.3007 . mRNA 9589 11171 . - . ID=g6.t1;Parent=g6;Name=g6.t1 NODE_1430_length_11398_cov_39.3007 . exon 11106 11171 . - . ID=g6.t1.exon1;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . CDS 11106 11171 . - 0 ID=cds.g6.t1;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . exon 10807 10873 . - . ID=g6.t1.exon2;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . CDS 10807 10873 . - 0 ID=cds.g6.t1;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . exon 10504 10683 . - . ID=g6.t1.exon3;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . CDS 10504 10683 . - 2 ID=cds.g6.t1;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . exon 9589 10264 . - . ID=g6.t1.exon4;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . CDS 10047 10264 . - 2 ID=cds.g6.t1;Parent=g6.t1 NODE_1430_length_11398_cov_39.3007 . three_prime_UTR 9589 10046 . - . ID=g6.t1.utr3p1;Parent=g6.t1 #PROT g6.t1 g6 MQGPEWNEDNIIVTGHQNGLVKIWSCDHFPKPIQESDDSAGRKSGVWAYEIHFRAQLATHTAFERKENRLPASITCLSVAKDNRKLYVGDERGRVFSWTLPDGTGGVSDYWVKDDMVNVCGKCKVRFTFAERRHHCRNCGGVFCGKCSKYEVAIPRLKLDRPVRVCQACYDHVKSH* # ORIGINAL: g443.t1 original gene structure, not modified by PASA NODE_1427_length_11405_cov_57.9778 AUGUSTUS gene 9535 11220 . + . ID=g443;Name=g443.t1 NODE_1427_length_11405_cov_57.9778 AUGUSTUS mRNA 9535 11220 . + . ID=g443.t1;Parent=g443;Name=g443.t1 NODE_1427_length_11405_cov_57.9778 AUGUSTUS exon 9535 11220 . + . ID=g443.t1.exon1;Parent=g443.t1 NODE_1427_length_11405_cov_57.9778 AUGUSTUS CDS 9535 11220 . + 0 ID=cds.g443.t1;Parent=g443.t1 #PROT g443.t1 g443 MDAQSLTDSSARFGTSGRSDAITVNYDPNLALAEGAPTMRTQARKAERGVVESDVAPGACENTETKRVPFRIRIRGVLGATSDYCRSRAGKNTFKFSVAFTVASLFVFIPQLALISGSTSFLTPVGVAILASSSFVGSYLIQCLFFAIGVALGGAMTLLAIRISPTNPYSLEFFLFLYVFIFSFVRAKVPQLVGAAMGAKILIVIGIIYSPLYGEFQTGNVSSLVRSITLSSLVAAVIGVAIFPRFALPELRTALGVYMLTLRSIIAVSTRLFLDEALPTDAAEVASLHDNVRRQHAQILALMADGRPELWLWSRRGINFDAVSRCLDSLAKKIATLGCDDKGRLPHVDAVEGCSESESKLERARVHAGIAAAIRIPLTHLTAAGTDALTALARSVTFRESVCLSQLPNIPSLIDTFNEEFNASIANAGIFVGEEGAAASTSTPTSTHDGGPSPQGAAESAVGSHLGSDSRKSLPQRRPWGPAVFEPYVFVFAMREVVSEVNRLGRAVANMEAVDATDIPTGRSSLVPLSRMSSSSFRSESRFPLLVRSYFVYLYTHLSVV* # PASA_UPDATE: g440.t1, single gene model update, valid-1, status:[pasa:asmbl_1557,status:12], valid-1 NODE_1427_length_11405_cov_57.9778 . gene 368 2020 . - . ID=g440;Name=g440.t1 NODE_1427_length_11405_cov_57.9778 . mRNA 368 2020 . - . ID=g440.t1;Parent=g440;Name=g440.t1 NODE_1427_length_11405_cov_57.9778 . five_prime_UTR 1951 2020 . - . ID=g440.t1.utr5p1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . exon 1947 2020 . - . ID=g440.t1.exon1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . CDS 1947 1950 . - 0 ID=cds.g440.t1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . exon 1495 1658 . - . ID=g440.t1.exon2;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . CDS 1495 1658 . - 2 ID=cds.g440.t1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . exon 1257 1317 . - . ID=g440.t1.exon3;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . CDS 1257 1317 . - 0 ID=cds.g440.t1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . exon 943 1009 . - . ID=g440.t1.exon4;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . CDS 943 1009 . - 2 ID=cds.g440.t1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . exon 368 640 . - . ID=g440.t1.exon5;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . CDS 541 640 . - 1 ID=cds.g440.t1;Parent=g440.t1 NODE_1427_length_11405_cov_57.9778 . three_prime_UTR 368 540 . - . ID=g440.t1.utr3p1;Parent=g440.t1 #PROT g440.t1 g440 MAGTLPSASSSLLLSLVLLLLTFSGLQFYKERLASSEALTIVGGFASSWLFIFALTAINNAEQLLFESSFQSKWIEVALALVVAMAGAATVHRVSVTTCFLFSLAALYFINRVSARAYQAPAAVSTGRKNK* # PASA_UPDATE: g442.t1, single gene model update, valid-1, status:[pasa:asmbl_1558,status:12], valid-1 NODE_1427_length_11405_cov_57.9778 . gene 4852 7794 . - . ID=g442;Name=g442.t1 NODE_1427_length_11405_cov_57.9778 . mRNA 4852 7794 . - . ID=g442.t1;Parent=g442;Name=g442.t1 NODE_1427_length_11405_cov_57.9778 . five_prime_UTR 7705 7794 . - . ID=g442.t1.utr5p1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 7324 7794 . - . ID=g442.t1.exon1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 7324 7704 . - 0 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 6945 7202 . - . ID=g442.t1.exon2;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 6945 7202 . - 0 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 6661 6780 . - . ID=g442.t1.exon3;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 6661 6780 . - 0 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 6250 6481 . - . ID=g442.t1.exon4;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 6250 6481 . - 0 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 5677 6086 . - . ID=g442.t1.exon5;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 5677 6086 . - 2 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 5307 5505 . - . ID=g442.t1.exon6;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 5307 5505 . - 0 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . exon 4852 5110 . - . ID=g442.t1.exon7;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . CDS 4908 5110 . - 2 ID=cds.g442.t1;Parent=g442.t1 NODE_1427_length_11405_cov_57.9778 . three_prime_UTR 4852 4907 . - . ID=g442.t1.utr3p1;Parent=g442.t1 #PROT g442.t1 g442 MAVLVIAGIFGAVLLAAAVLVLLVVRQAKKMPRFDSDKKDDGLTEKEKEASIRKIYTPKEVPENIDAIVIGSGIGGLATAVLLAREGKKVLVLEQHDVAGGCMHTFIDEHGFEYDTGVHYIGGKVGETKGRGTSMRRLFDVLTDGKLRWEKLADDFDIAVSRQTNEEFHTSGNMRKMIDDLCAQFPEEQGAIRTYFKMVREANASAGGYFLLKMMPRWLANVLRSVLSTPFHKFSDKTLGEVLDSLTTNKKLKGILAYPYGDHGLVPSKASFTIHAMIVGHYAGGAYYPVGGSSEIARHAVAVITKAGGKVLVRADVGEIIVDAASMTARGVRMRKNDQEILAPIVISACGALNTYKKLLAKEITQSTEELRYINTLLAPTPTEGPLYPSTGHLSLFVGMNGDPEQLKLPKSNYWVFPNWNHEESYRNYYADKNSPFGGLFISFPAAKDPTYKTRFPGKSTALVVTEANYEWFREWESERVKKRGDDYMALKDSLQSRLLEEFFVQFPHLRGSVEFVDLGTPLSNNHYLGSFRGESYGLTHTPQRFRIQHVLGPATPIRGLYLSGQDVATNGVGGALFGGFICAANISKRILWNNLNLLT* # PASA_UPDATE: g441.t1, single gene model update, valid-1, status:[pasa:asmbl_1556,status:3], valid-1 NODE_1427_length_11405_cov_57.9778 . gene 2260 4776 . + . ID=g441;Name=g441.t1 NODE_1427_length_11405_cov_57.9778 . mRNA 2260 4776 . + . ID=g441.t1;Parent=g441;Name=g441.t1 NODE_1427_length_11405_cov_57.9778 . five_prime_UTR 2260 2520 . + . ID=g441.t1.utr5p1;Parent=g441.t1 NODE_1427_length_11405_cov_57.9778 . exon 2260 2540 . + . ID=g441.t1.exon1;Parent=g441.t1 NODE_1427_length_11405_cov_57.9778 . CDS 2521 2540 . + 0 ID=cds.g441.t1;Parent=g441.t1 NODE_1427_length_11405_cov_57.9778 . exon 2900 4776 . + . ID=g441.t1.exon2;Parent=g441.t1 NODE_1427_length_11405_cov_57.9778 . CDS 2900 4577 . + 1 ID=cds.g441.t1;Parent=g441.t1 NODE_1427_length_11405_cov_57.9778 . three_prime_UTR 4578 4776 . + . ID=g441.t1.utr3p1;Parent=g441.t1 #PROT g441.t1 g441 MSRARSGSLTAKSVKNKTGVDMFVPTSRQVAASITEPLGHAEYTIGVRATAPQYKPVGAPEDEVNEFMVTRRYSEFEVFYAHLVEEFPGDAFPILPAKNMIVTDNVIDTRRAAFETLIKFLARDPRYCACNSLLDFLSIPMSQRFVKIVRKKNEIPSGDVLAKEKGMFEDELFESGAAAEGETREEFHERMGRVKAAEEAALASKTRAKQVTKAAPKSIFADPDEDPLFDVDEEDPFTKIAGKPKGKGAQQQKTQTQQAQQSPLHDEQQEAPTPASTQSQSQSQSRKAAVAAKEQKVAKAKAFLFGDENDDAEADALFGKKKTASPAATTAPLPSAADAAADDDALFVPETKKKPAAAQTAHAVAAASDSPSHKTPAQSAHVTREEPVAEIAQKAAVAPPTTAPTGPRKKVQLYAGMDLEDDDEAYRKKGLDGLYVPANAILFGNMAKEITRDAASEDALMKIEDDLSHFELDGAAARKKAAAEATAKAKTSGGVDDDLFGMVSKPKASTAVGGASGASLDDDLFAIAGPGTTAAGVDPSSFDAASISDYIARNAAGSAKVDLFS* # PASA_UPDATE: g439.t1, single gene model update, valid-1, status:[pasa:asmbl_1559,status:12], valid-1 NODE_1427_length_11405_cov_57.9778 . gene 53 307 . + . ID=g439;Name=g439.t1 NODE_1427_length_11405_cov_57.9778 . mRNA 53 307 . + . ID=g439.t1;Parent=g439;Name=g439.t1 NODE_1427_length_11405_cov_57.9778 . exon 53 307 . + . ID=g439.t1.exon1;Parent=g439.t1 NODE_1427_length_11405_cov_57.9778 . CDS 53 235 . + 0 ID=cds.g439.t1;Parent=g439.t1;5_prime_partial=true NODE_1427_length_11405_cov_57.9778 . three_prime_UTR 236 307 . + . ID=g439.t1.utr3p1;Parent=g439.t1 #PROT g439.t1 g439 GAYCRAFGRSREGPRQGKGIAASRARGEGGRHKSSRSVIEPALTHHSVACITSRAKNVCA* # ORIGINAL: g4225.t1 original gene structure, not modified by PASA NODE_5034_length_1064_cov_83.0779 AUGUSTUS gene 2 1064 . + . ID=g4225;Name=g4225.t1 NODE_5034_length_1064_cov_83.0779 AUGUSTUS mRNA 2 1064 . + . ID=g4225.t1;Parent=g4225;Name=g4225.t1 NODE_5034_length_1064_cov_83.0779 AUGUSTUS exon 2 1064 . + . ID=g4225.t1.exon1;Parent=g4225.t1 NODE_5034_length_1064_cov_83.0779 AUGUSTUS CDS 2 1064 . + 0 ID=cds.g4225.t1;Parent=g4225.t1 #PROT g4225.t1 g4225 DRNATHTYASLGTYFLNVTAYNDVSAESVIIHVKVIEGVTGLSALFPDPLTVAVGDSTSFDVQVSTGTGVSYLWDWGDGTSVSSTNVGTETHTYAVAGTVTLNITAYNDVSGEYFLTVIVVQERVSGLSASYADPLPIAAGSAFDFTVSLSAGTDVSYLWDWGDQTSTSNSADGNATHTYASPGTYALNVTAYNDVSAESVIIHVEVIEGVTGINARFPNDLAVAVGRAHSYDVDVSTGTGISYLWDWGDGTSVSSTNVGTATHTYGLAGGFLINITAFNEVSSDYALVSIVAEEEVSGLSALYADPLPIAVGSPFDFTVSLSAGTDVLYLWDWGDQTSTSNSADRNATHTYAS # PASA_UPDATE: novel_model_8_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_1985,status:3], valid-1 NODE_1561_length_10475_cov_92.6949 . gene 8982 10470 . - . ID=novel_gene_8_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1561_length_10475_cov_92.6949 . mRNA 8982 10470 . - . ID=novel_model_8_5b6be656;Parent=novel_gene_8_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1561_length_10475_cov_92.6949 . five_prime_UTR 10469 10470 . - . ID=novel_model_8_5b6be656.utr5p1;Parent=novel_model_8_5b6be656 NODE_1561_length_10475_cov_92.6949 . exon 9610 10470 . - . ID=novel_model_8_5b6be656.exon1;Parent=novel_model_8_5b6be656 NODE_1561_length_10475_cov_92.6949 . CDS 9932 10468 . - 0 ID=cds.novel_model_8_5b6be656;Parent=novel_model_8_5b6be656 NODE_1561_length_10475_cov_92.6949 . exon 8982 9214 . - . ID=novel_model_8_5b6be656.exon2;Parent=novel_model_8_5b6be656 NODE_1561_length_10475_cov_92.6949 . three_prime_UTR 9610 9931 . - . ID=novel_model_8_5b6be656.utr3p1;Parent=novel_model_8_5b6be656 NODE_1561_length_10475_cov_92.6949 . three_prime_UTR 8982 9214 . - . ID=novel_model_8_5b6be656.utr3p2;Parent=novel_model_8_5b6be656 #PROT novel_model_8_5b6be656 novel_gene_8_5b6be656 MGGCSQSGHTRLCMHAFKSKKRLISSIENAVLSLATLMFVRVSSESRCMSPYISPIGVFFAMGERVAWGCFFVSGVSCARDVRVDRAELRLLHSSAFFYLSFSFLPAGLFFSTRFLLLGKFCLSPLSLSLCLSCGLSVSLFSHDSIDVDMEPSLPRRVGVGRGRVDTPRSFYFDWLNG* # PASA_UPDATE: g14296.t1, single gene model update, valid-1, status:[pasa:asmbl_1983,status:12], valid-1 NODE_1561_length_10475_cov_92.6949 . gene 313 1247 . - . ID=g14296;Name=g14296.t1 NODE_1561_length_10475_cov_92.6949 . mRNA 313 1247 . - . ID=g14296.t1;Parent=g14296;Name=g14296.t1 NODE_1561_length_10475_cov_92.6949 . five_prime_UTR 1153 1247 . - . ID=g14296.t1.utr5p1;Parent=g14296.t1 NODE_1561_length_10475_cov_92.6949 . exon 313 1247 . - . ID=g14296.t1.exon1;Parent=g14296.t1 NODE_1561_length_10475_cov_92.6949 . CDS 313 1152 . - 0 ID=cds.g14296.t1;Parent=g14296.t1 #PROT g14296.t1 g14296 MSVEAMHVLAPRAVSTSDLVDMEAECHTVGCARSPSSCRCRHVHWIWAAHPDLSGSSAAGESFKRSGKWMLRPTWKTIDRAWAVVRALIAEGKAGTCAKVAPFGRSAGAHVTSPPPQQHGAEQTGLICVYTDDHENIADVMRVLLAIRDTRIESGGTCLLCYKTDDATYAGAYSSDSSATRAGFASAAEKKHKNEKVSKYTSPRLANGPPSECKVSLMQHNLGPSCESIEVAFRAPSATGSDGRGQGVVWSMRDAIENVSVRERHYCASSALLSHGFEK* # ORIGINAL: g14298.t1 original gene structure, not modified by PASA NODE_1561_length_10475_cov_92.6949 AUGUSTUS gene 6881 8320 . - . ID=g14298;Name=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS mRNA 6881 8320 . - . ID=g14298.t1;Parent=g14298;Name=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS exon 8236 8320 . - . ID=g14298.t1.exon1;Parent=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS CDS 8236 8320 . - 0 ID=cds.g14298.t1;Parent=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS exon 7697 7943 . - . ID=g14298.t1.exon2;Parent=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS CDS 7697 7943 . - 2 ID=cds.g14298.t1;Parent=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS exon 6881 7133 . - . ID=g14298.t1.exon3;Parent=g14298.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS CDS 6881 7133 . - 1 ID=cds.g14298.t1;Parent=g14298.t1 #PROT g14298.t1 g14298 MRPSILLLASLAVLGAVSQVMAAPAFCKGLDCPVFTVVNSNSQFEERLYEESKWVSTKIDDMKYDDAVSAGFMKLFKYISGANKEQTKVPMTSPVLTQVVPGQGPFCNSHLKVSFFVPFAVKTSGIPEPTDATVFVETLPAASYYVKSFAGFAKENDWTQNTLALGTALNASNIAYDDGQFFTAGYDRWVAARM* # ORIGINAL: g14297.t1 original gene structure, not modified by PASA NODE_1561_length_10475_cov_92.6949 AUGUSTUS gene 3481 5532 . - . ID=g14297;Name=g14297.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS mRNA 3481 5532 . - . ID=g14297.t1;Parent=g14297;Name=g14297.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS exon 3481 5532 . - . ID=g14297.t1.exon1;Parent=g14297.t1 NODE_1561_length_10475_cov_92.6949 AUGUSTUS CDS 3481 5532 . - 0 ID=cds.g14297.t1;Parent=g14297.t1 #PROT g14297.t1 g14297 MSASAVILEPTPMGHFARLPMHIVHELTNNGTFTTEVLRRLAQTSKGMRDLVYFIALAQSLSPWSRSTWKLCTSVASPIRLLEIDEFVRHSCVEEFEQECVAIIKSQVPDNVRLGLECGLAPSFYRRLDESERAGDVEIASNRMDVDKKVDTYIDHYECIDDHPWTKQMLDESESEGATLVGTVEAATRDIISVVSTFRVQQWNVRDFRVTDDDGIFRMYCAVADITFTLCNPEHSSDGSSPQWLQIKLKGMEKQFPCYDKPGVYNYASIYSCFDESVALLSFRTPADAPGTFHDAGKTPFLRAFGQKENARSKAEAAALDRENISDDGEQQHSWDIEPMSDDFLAAIVRTFPGMSPARILYCIYLCIRLIGSARDREATGCWMFDPLVVSDCADQWLLENCDNFDFDYEGEYEGVDDDAPEMHDRKDVRSQRGGGVKYDEGTHAQACTAMTGLTWLKGHSTNELDIVGIGQYFDAHIRWLEEGAVSFAGIGLCVHFGDTDFFRQPECMAESDSHDEELVLESEVLRVRSGCEDFDPSLHDGNTHPLVMECPNDCFRMRGYNLNMTARKRARETVDSADLWACPGNQELVDSPSEARRRKVFCETVLPVKRAIAREALEAYFADEGEWAPDEECSDVEEDRTDSDVDKLEARRERAKECFEYRAHFLLVPTSESESEGRSDSE* # ORIGINAL: g9718.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 17234 20293 . + . ID=g9718;Name=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 17234 20293 . + . ID=g9718.t1;Parent=g9718;Name=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 17234 17329 . + . ID=g9718.t1.exon1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 17234 17329 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 17655 17755 . + . ID=g9718.t1.exon2;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 17655 17755 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 17858 17963 . + . ID=g9718.t1.exon3;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 17858 17963 . + 1 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 18250 18530 . + . ID=g9718.t1.exon4;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 18250 18530 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 18766 19153 . + . ID=g9718.t1.exon5;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 18766 19153 . + 1 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 19260 19427 . + . ID=g9718.t1.exon6;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 19260 19427 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 19548 19685 . + . ID=g9718.t1.exon7;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 19548 19685 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 19874 19964 . + . ID=g9718.t1.exon8;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 19874 19964 . + 0 ID=cds.g9718.t1;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 20160 20293 . + . ID=g9718.t1.exon9;Parent=g9718.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 20160 20293 . + 2 ID=cds.g9718.t1;Parent=g9718.t1 #PROT g9718.t1 g9718 METVVDQQRRYHEELERLEVAAANELALRGKTLKEQINTDNRVLALLGRIQSRSKDLIALYEDNDGLRKAEITAFSTGNEFSEFYDRLKTLKDYHRRNPNEIAEPMEMEFLAHKPKRTADVADGDGNGEEEVEEDAMMVVFTDEEGCGRYLDLHERFNEFLNVKGMERVDYLTYLQTFDNFFDIPKEKKMQEYKSYVQSLRNYLRDYHVRVNPLYDLDGDLSHARDAFDQQWSAGRFMGWEGVGGDNDGGNGAPASLFCVACGKDFAKQTVFDAHLKGQKHVKAAQRLAAEGKSFSAGDVDEARRSREAEKNLKLREVAVLEAEVYALVELLGEQRQATRAEVERKQARTADEIYAEHEEAEAELDDDDDDADKPIYNPKNVPLGWDGKPIPYWLYKLHGLNISYDCEICGNQSYRGPKAFQRHFQEWRHAHGMRQLGIPNTRHFLNVTKIDDARALWDRIKGLKKVESFKADVEEEYEDTQGNVVNKKIYEDLRRQGLL* # PASA_UPDATE: g9714.t1, single gene model update, valid-1, status:[pasa:asmbl_4538,status:3], valid-1 NODE_254_length_29156_cov_41.2659 . gene 3361 7759 . + . ID=g9714;Name=g9714.t1 NODE_254_length_29156_cov_41.2659 . mRNA 3361 7759 . + . ID=g9714.t1;Parent=g9714;Name=g9714.t1 NODE_254_length_29156_cov_41.2659 . five_prime_UTR 3361 3418 . + . ID=g9714.t1.utr5p1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . five_prime_UTR 3657 3668 . + . ID=g9714.t1.utr5p2;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 3361 3418 . + . ID=g9714.t1.exon1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 3657 3750 . + . ID=g9714.t1.exon2;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 3669 3750 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 3884 3972 . + . ID=g9714.t1.exon3;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 3884 3972 . + 2 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 4221 4371 . + . ID=g9714.t1.exon4;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 4221 4371 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 4577 4647 . + . ID=g9714.t1.exon5;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 4577 4647 . + 2 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 4948 5028 . + . ID=g9714.t1.exon6;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 4948 5028 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 5429 5569 . + . ID=g9714.t1.exon7;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 5429 5569 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 5869 6005 . + . ID=g9714.t1.exon8;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 5869 6005 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 6246 6397 . + . ID=g9714.t1.exon9;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 6246 6397 . + 1 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 6653 6768 . + . ID=g9714.t1.exon10;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 6653 6768 . + 2 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 7222 7406 . + . ID=g9714.t1.exon11;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 7222 7406 . + 0 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . exon 7594 7759 . + . ID=g9714.t1.exon12;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . CDS 7594 7660 . + 1 ID=cds.g9714.t1;Parent=g9714.t1 NODE_254_length_29156_cov_41.2659 . three_prime_UTR 7661 7759 . + . ID=g9714.t1.utr3p1;Parent=g9714.t1 #PROT g9714.t1 g9714 MLSNIRSTAVHAAPIVRAATVVSSQRQYASKVSVANPIVEIKGDGVAAGLWDLVSKKLVDPHVDVKKRTFDLTLENRLRTKDQITKDAAAAIKEVGAAVKCATTTPDESGELRSANATIRGVIGGVIIREQIRPKNIHPAIPTWTNPITVVREATGDQFDAADFLAPGAGNFQITFTAANGEKTSADVFQFKKSGVAVGMYNTDAAIETFAHACFNAAIERKQPLYLSSKNTILKKYDGRFKDVFQAIYDKSYKGKFDEMKIWYEHRLIDDMVAYAIKSNGGFVWACKNYDGDVQSSTVAAGFGSIALMTSALVSGNGKIVVAETGHGTLARYLPAYAKGNANVSLNPLSTVFAWSKGLSHRATLDNNAALAKYAASLASAAIETVEAGNFTKDLAHAAGKESSFISTAAFVDAIGASLSKKL* # PASA_UPDATE: g9716.t1, single gene model update, valid-1, status:[pasa:asmbl_4539,status:12], valid-1 NODE_254_length_29156_cov_41.2659 . gene 9844 15345 . + . ID=g9716;Name=g9716.t1 NODE_254_length_29156_cov_41.2659 . mRNA 9844 15345 . + . ID=g9716.t1;Parent=g9716;Name=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 9844 9942 . + . ID=g9716.t1.exon1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 9844 9942 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 10142 10220 . + . ID=g9716.t1.exon2;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 10142 10220 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 10541 10638 . + . ID=g9716.t1.exon3;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 10541 10638 . + 2 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 11177 11266 . + . ID=g9716.t1.exon4;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 11177 11266 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 11501 11796 . + . ID=g9716.t1.exon5;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 11501 11796 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 11963 12011 . + . ID=g9716.t1.exon6;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 11963 12011 . + 1 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 12321 12452 . + . ID=g9716.t1.exon7;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 12321 12452 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 12757 12876 . + . ID=g9716.t1.exon8;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 12757 12876 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 13026 13149 . + . ID=g9716.t1.exon9;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 13026 13149 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 13517 13686 . + . ID=g9716.t1.exon10;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 13517 13686 . + 2 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 14000 14119 . + . ID=g9716.t1.exon11;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 14000 14119 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . exon 14463 15345 . + . ID=g9716.t1.exon12;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . CDS 14463 14873 . + 0 ID=cds.g9716.t1;Parent=g9716.t1 NODE_254_length_29156_cov_41.2659 . three_prime_UTR 14874 15345 . + . ID=g9716.t1.utr3p1;Parent=g9716.t1 #PROT g9716.t1 g9716 MASKFHDTSDSNSLSDDNILDDMGTSHNSVDYKILSAANARFAQPDDPPLYAGEKIIVMAKDVNFICPYAGPTKGTLFITNYKVHFRTAGSQSEFSVPLGNVTRIEKIGGQNSRGDNSYGLELFCKDVRNLRFSFATEGRFRKHVYVPIITYAFPLNHDQQLFAFSYTDGGCPEHLNGWGVYNPVDEFARLGVPNKSWRVAQVNSEYSICDTYPSVVAVPSAVDDAQLTAVAQFRSRGRLPVLSWIHPEQKASITRCSQPKVGFAAKRSPEDEDLIARIIEANPNSRKLYIMDARPRLNAEANKAKGAGYENEEFYSNTELVFLNIANIHSMRDSLKKLKDIVFPNIPESNWLSSLDATKWLDHVRGVLQGSVKIVDLVERSGHSVLVHCSDGWDRTSQLTSIAMLLLDPFYRTIRGFEVLVEKEWLSFGHKFAERIGHGDNHHANEQRSPIFLQFIDCITTQFPCAFEFNENFLATVIDHSHSCLFGTFLCNSEAERVREDLKNKTVSLWSHINQNVRQFTNPLYLPSLQQHVLYPSASATRLRFWSGFYTRWNPRMVPQESILTRSTELVELCARLKAEIDHMQGDGALPASH* # ORIGINAL: g9713.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 1304 2895 . - . ID=g9713;Name=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 1304 2895 . - . ID=g9713.t1;Parent=g9713;Name=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 2827 2895 . - . ID=g9713.t1.exon1;Parent=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 2827 2895 . - 0 ID=cds.g9713.t1;Parent=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 2504 2663 . - . ID=g9713.t1.exon2;Parent=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 2504 2663 . - 0 ID=cds.g9713.t1;Parent=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 1304 2322 . - . ID=g9713.t1.exon3;Parent=g9713.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 1304 2322 . - 2 ID=cds.g9713.t1;Parent=g9713.t1 #PROT g9713.t1 g9713 MGRHVVKAQITGIQKRRTPSKHYVYIIEVDWSDGERAVIYRRYSEFFEFQTAMLDTHPDVGKLYGNPPNRILPYLPGKKLIGRSAIREVAEERENQLDSYLKELVKMPSQHTECALMVAFFSSNEADQHPPSNAKTRPISGEYATRHGITPAAAPKAEKQPKVEKQPKVEKQRKQYEQSNDVELESRPSATPAARPPAPKAASSRAAPIERYITGADYSAQGDGEITFAANVVVDEVLEKNENGWWMIRCGGREGWAPSNYLDPYKAPAAPAAAAKTFQQPQQQHSQPAVAAAKSFQQPHQQQQQQQQHSQPAVAPGRPSAPPRPSAPSVSTGGPARPPRPSAPSVASASSPAPSASASASYGGARPAAAPVSSKINAYEKPEAAPKPPIAAKRPAPPGGASAIKSNPFMQADRK* # ORIGINAL: g9723.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 27434 29110 . - . ID=g9723;Name=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 27434 29110 . - . ID=g9723.t1;Parent=g9723;Name=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 28987 29110 . - . ID=g9723.t1.exon1;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 28987 29110 . - 0 ID=cds.g9723.t1;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 28527 28696 . - . ID=g9723.t1.exon2;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 28527 28696 . - 2 ID=cds.g9723.t1;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 27841 28286 . - . ID=g9723.t1.exon3;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 27841 28286 . - 0 ID=cds.g9723.t1;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 27434 27593 . - . ID=g9723.t1.exon4;Parent=g9723.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 27434 27593 . - 1 ID=cds.g9723.t1;Parent=g9723.t1 #PROT g9723.t1 g9723 MLLQYEVDSKCPQYWWTHLLFIHNNFYPVDSNKVCMGWLWYVADDMIFYIISPIYIVAYRKNRKVAWFLILITLAASFGVTGWLIEKYNLDIYVFGAKYNDFMYYVYSKAWTRIPSYLVGIGAAFIVADRELYTRPRNVLLRAITHPYVFFVIAVGSMTAIVFSPYSTYRNPTPEHQWTQTDYTAYMTVSHFSWAVCTAILTIGCCFGRYSFVNWFLSLGMWTPLMRLTYGAYLVHPIIIKVVACNSNQYPEYSWLSMAYSAGGNLIFAFVVSTILFLAIERPFISLEGILLKKQSRRA* # ORIGINAL: g9721.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 24042 25877 . + . ID=g9721;Name=g9721.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 24042 25877 . + . ID=g9721.t1;Parent=g9721;Name=g9721.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 24042 25877 . + . ID=g9721.t1.exon1;Parent=g9721.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 24042 25877 . + 0 ID=cds.g9721.t1;Parent=g9721.t1 #PROT g9721.t1 g9721 MAFLPAMSLTTAGIALIAMCGILIATVSAADVTPKRYCSRGEACWPTSSEVVALTNALEPGLSRVLAWDASAITRVSAVPYSSPNDQPLYGEGVGGLAPVYTSTATDDANSCYQPASNPYASAFCKVSTRNGPFEGWTPGFVVWPLKVSHVQAAVNFAVSHNLCIMVAGTGHDFLNRHSCKDGVFIRTSLMKDISWDLSDAKGFGHAPGNVRFGPGIVFDEVHKSAAANNRAISSGWASTVGVVGWSIGGGHGPFAPAFGLGVDNILEIDIVIANGTLVTANANKSSDLFWAVRGGGGSTWGVITAITLRAHEVPTGGFTRLRASWSGSLCGAGRTKASTFLTSFNAWMLLRDKRWGGLLFVTPERSTTTPGCTAKWSVFLQYVFQGNYTDTAFIGGFAGINSTGPDWTDVKNYATWNEQLKTQALEPIIPTNGYYAPGLGAIPSVLVPADAARNGKLVAQLSARLFDCVDTGTCNEQQIYHCLTGHTDSPQATGVSVSNGMRTALLHLVVPGWSAAYTDGYYALGQHSYFSESAYTMPGETWRQRYWGTNYASLLAVKSKYDSNFAFSCHNCVGSPPQPSGGATSSGSVHLSSVLVAVVVAVTWSMFAAM* # ORIGINAL: g9715.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 8210 9196 . + . ID=g9715;Name=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 8210 9196 . + . ID=g9715.t1;Parent=g9715;Name=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 8210 8418 . + . ID=g9715.t1.exon1;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 8210 8418 . + 0 ID=cds.g9715.t1;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 8558 8616 . + . ID=g9715.t1.exon2;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 8558 8616 . + 1 ID=cds.g9715.t1;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 8790 8866 . + . ID=g9715.t1.exon3;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 8790 8866 . + 2 ID=cds.g9715.t1;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 9053 9196 . + . ID=g9715.t1.exon4;Parent=g9715.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 9053 9196 . + 0 ID=cds.g9715.t1;Parent=g9715.t1 #PROT g9715.t1 g9715 MNSFALVLALHAIAAAAILSPAAAYPLDELVAHGPNGERIVQVVEHATTDTIFFTNANQTDSIGNTLTFGNPLFDAKDETQIGRDAGHCVRAYPGEMWECRWTAYFDGHGSISIEGGFFDAKDSELAVTGGTGEFVGASGILRLGHRDKTGKSYDFTYVLNN* # ORIGINAL: g9720.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 22577 23172 . + . ID=g9720;Name=g9720.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 22577 23172 . + . ID=g9720.t1;Parent=g9720;Name=g9720.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 22577 22715 . + . ID=g9720.t1.exon1;Parent=g9720.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 22577 22715 . + 0 ID=cds.g9720.t1;Parent=g9720.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 22832 23172 . + . ID=g9720.t1.exon2;Parent=g9720.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 22832 23172 . + 2 ID=cds.g9720.t1;Parent=g9720.t1 #PROT g9720.t1 g9720 MASFRNISVFLALSVLLFANAALAANYCTCRCLCFGVVQNQTNGNCAGLHLRAKLDGDKVASAVSATNARDVVFSEVIAFLDVKENERDELVEIVYGQSEDRIRLTHSHLIYRRPGGVARADETAPHVAEFADAVSVGDSVLVMTENGVLAAREVTRRL* # PASA_UPDATE: g9719.t1, single gene model update, valid-1, status:[pasa:asmbl_4537,status:3], valid-1 NODE_254_length_29156_cov_41.2659 . gene 20546 22073 . - . ID=g9719;Name=g9719.t1 NODE_254_length_29156_cov_41.2659 . mRNA 20546 22073 . - . ID=g9719.t1;Parent=g9719;Name=g9719.t1 NODE_254_length_29156_cov_41.2659 . five_prime_UTR 22011 22073 . - . ID=g9719.t1.utr5p1;Parent=g9719.t1 NODE_254_length_29156_cov_41.2659 . exon 20958 22073 . - . ID=g9719.t1.exon1;Parent=g9719.t1 NODE_254_length_29156_cov_41.2659 . CDS 20958 22010 . - 0 ID=cds.g9719.t1;Parent=g9719.t1 NODE_254_length_29156_cov_41.2659 . exon 20546 20761 . - . ID=g9719.t1.exon2;Parent=g9719.t1 NODE_254_length_29156_cov_41.2659 . CDS 20732 20761 . - 0 ID=cds.g9719.t1;Parent=g9719.t1 NODE_254_length_29156_cov_41.2659 . three_prime_UTR 20546 20731 . - . ID=g9719.t1.utr3p1;Parent=g9719.t1 #PROT g9719.t1 g9719 MMADKFGSAPPSYVQVIISEQPHSQPILDELLLQKLSAVRNYDIRQGNAVLEALTNGAWPNTYIISDNDRHVVLTGSQQNETTPFPLFLVQEESECCSRCCCPGLQSFVGRVHHASPRVRKGNAPCGCQQGHGYTTSPEAGVAFTLEREGCCNRCIGCCICCACCQNDMTVHGGNASVRPGMPPLQSPTYFGRSLVPIGGGGLVPTVHLFTTASETPFAVVKGPTFYAGCLGICTDTVFHVYNAGAGGIKASGDKSDYIGTIVKPKPASFGECCLQMCTNVDRYRFEAGPAFDALNSQQRAVILGNIIHIEYMFFENDLPPVYCSKSGGSNSTTIICTLCQMYCFGCCCPIQICIPLGGN* # ORIGINAL: g9722.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 26433 27116 . + . ID=g9722;Name=g9722.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 26433 27116 . + . ID=g9722.t1;Parent=g9722;Name=g9722.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 26433 27116 . + . ID=g9722.t1.exon1;Parent=g9722.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 26433 27116 . + 0 ID=cds.g9722.t1;Parent=g9722.t1 #PROT g9722.t1 g9722 MVYQENRPPIDFAGYSWLVKSSNAAGYPVGPGPNWFDDSKDTVFTDESGLHLRLHQHGSSELWKCAEVIGPALGYGTYTWTVSSSLAYMDPNVMLGLFVYENDDKEIDYEFSQFDDELGRGNAQFVLQPYGVPGNVQRFDMPEGGRTTHTFRWTPGALSCKSATQEGSVIFSSARTCDRGVPIASPVSRVRMNLWLKGGRPPAYGSDAVEIVVSDFTFVKERQKWSW* # ORIGINAL: g9717.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 15604 16608 . - . ID=g9717;Name=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 15604 16608 . - . ID=g9717.t1;Parent=g9717;Name=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 16447 16608 . - . ID=g9717.t1.exon1;Parent=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 16447 16608 . - 0 ID=cds.g9717.t1;Parent=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 16042 16266 . - . ID=g9717.t1.exon2;Parent=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 16042 16266 . - 0 ID=cds.g9717.t1;Parent=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 15604 15759 . - . ID=g9717.t1.exon3;Parent=g9717.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 15604 15759 . - 0 ID=cds.g9717.t1;Parent=g9717.t1 #PROT g9717.t1 g9717 MRPLTDEETKSVFEKLAKYIGANIKLLLERPDGEYCFRYHRDRIYYVSEKIMKKASNVSRDNLISLGTCIGRFSKGGKFRLHVTALDFLAPYAKFKIWVKPSAEQSFLYGNHVTKNGLGRITENTEQYQGVVVYSMADLPLGFGVASKSTQDCRKLDPTGIVAFHQADVGEYLRDEDTLL* # ORIGINAL: g9712.t1 original gene structure, not modified by PASA NODE_254_length_29156_cov_41.2659 AUGUSTUS gene 109 495 . + . ID=g9712;Name=g9712.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS mRNA 109 495 . + . ID=g9712.t1;Parent=g9712;Name=g9712.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS exon 109 495 . + . ID=g9712.t1.exon1;Parent=g9712.t1 NODE_254_length_29156_cov_41.2659 AUGUSTUS CDS 109 495 . + 0 ID=cds.g9712.t1;Parent=g9712.t1 #PROT g9712.t1 g9712 YSRCAAGPLPPLRTVLVMSRVTFLSSVFIVALTMIMLYLMMGQTVRLLTYGGFRLWPILHLHSANFTFHFLYMWPWELQWTRRDQHDRRQRNADMVHAMGPFGGGDPMALAADGGLDVARPAPPPALD* # ORIGINAL: g12313.t1 original gene structure, not modified by PASA NODE_4336_length_1799_cov_31.5986 AUGUSTUS gene 948 1729 . - . ID=g12313;Name=g12313.t1 NODE_4336_length_1799_cov_31.5986 AUGUSTUS mRNA 948 1729 . - . ID=g12313.t1;Parent=g12313;Name=g12313.t1 NODE_4336_length_1799_cov_31.5986 AUGUSTUS exon 1643 1729 . - . ID=g12313.t1.exon1;Parent=g12313.t1 NODE_4336_length_1799_cov_31.5986 AUGUSTUS CDS 1643 1729 . - 0 ID=cds.g12313.t1;Parent=g12313.t1 NODE_4336_length_1799_cov_31.5986 AUGUSTUS exon 948 1370 . - . ID=g12313.t1.exon2;Parent=g12313.t1 NODE_4336_length_1799_cov_31.5986 AUGUSTUS CDS 948 1370 . - 0 ID=cds.g12313.t1;Parent=g12313.t1 #PROT g12313.t1 g12313 MNGVWTGILDGRMGVFKVVFVEFVDEAPKGEVDTPANPPETSHVTTANPPKPTPDASGQLPPKPAPYVAKPPPPSSSAPGLPSSGMAAAAAQAAAKRRASMGESPSGAVEVWLHSLGLRQYVRTFIDSGFDDMEFMRDITAGDLETIGVTDGVHRNAILASVGAPITHR* # PASA_UPDATE: g7887.t1, single gene model update, valid-1, status:[pasa:asmbl_8635,status:3], valid-1 NODE_640_length_19800_cov_43.8183 . gene 6831 9207 . + . ID=g7887;Name=g7887.t1 NODE_640_length_19800_cov_43.8183 . mRNA 6831 9207 . + . ID=g7887.t1;Parent=g7887;Name=g7887.t1 NODE_640_length_19800_cov_43.8183 . five_prime_UTR 6831 7253 . + . ID=g7887.t1.utr5p1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 6831 7297 . + . ID=g7887.t1.exon1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 7254 7297 . + 0 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 7525 7605 . + . ID=g7887.t1.exon2;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 7525 7605 . + 1 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 7840 7865 . + . ID=g7887.t1.exon3;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 7840 7865 . + 1 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 8234 8323 . + . ID=g7887.t1.exon4;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 8234 8323 . + 2 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 8727 8815 . + . ID=g7887.t1.exon5;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 8727 8815 . + 2 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . exon 8995 9207 . + . ID=g7887.t1.exon6;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . CDS 8995 9120 . + 0 ID=cds.g7887.t1;Parent=g7887.t1 NODE_640_length_19800_cov_43.8183 . three_prime_UTR 9121 9207 . + . ID=g7887.t1.utr3p1;Parent=g7887.t1 #PROT g7887.t1 g7887 MSTPARRRLMRDFKRLQDDPPAGVSGAPTDNSIMLWNAVIFGPQDTPFEDGTFKLTLEFSEDYPNKPPTVRFVSRMFHPNVYADGGICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANASAAQLYQENKREYEKKVRAIVEQSWME* # ORIGINAL: g7891.t1 original gene structure, not modified by PASA NODE_640_length_19800_cov_43.8183 AUGUSTUS gene 17897 19392 . - . ID=g7891;Name=g7891.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS mRNA 17897 19392 . - . ID=g7891.t1;Parent=g7891;Name=g7891.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 18896 19392 . - . ID=g7891.t1.exon1;Parent=g7891.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 18896 19392 . - 0 ID=cds.g7891.t1;Parent=g7891.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 17897 18575 . - . ID=g7891.t1.exon2;Parent=g7891.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 17897 18575 . - 1 ID=cds.g7891.t1;Parent=g7891.t1 #PROT g7891.t1 g7891 MALVDLFRRLIAQVLNLFLAAYRANNPIGRREAVAKIPTVDVLPAGVVLFEVATNNTGVQILFAVTWIDPSDGDVKVVPGSLLAAAVLQSTGDIQQEIMNAIGGGTTDNGGGVDNSNSGGQSSGDDSRRSLTIVLSTVLPCVALIALIAILVIHRRRRAASMAEGRHSGFYDVARAEAASVNSKDIPNDDASTAGDGNNTDAPAINVRLEFHASRSGQSLPSASASDLPTERAEHEGDAKDRVTHGEPQHEDQANTREDAQDTRAADATADTVSQSRISLDSQANKSVASDQQKVGAATDDVVSIHVQSESDNPPTYEHSGGQSGSQASFQSVIAMPKAPANADATDVARTKEDESEGGNIPQYKYPPKYAGDGRGAGHGAASPSLEESRV* # PASA_UPDATE: g7888.t1, single gene model update, valid-1, status:[pasa:asmbl_8633,status:12], valid-1 NODE_640_length_19800_cov_43.8183 . gene 9617 11667 . - . ID=g7888;Name=g7888.t1 NODE_640_length_19800_cov_43.8183 . mRNA 9617 11667 . - . ID=g7888.t1;Parent=g7888;Name=g7888.t1 NODE_640_length_19800_cov_43.8183 . exon 9617 11667 . - . ID=g7888.t1.exon1;Parent=g7888.t1 NODE_640_length_19800_cov_43.8183 . CDS 9946 11667 . - 0 ID=cds.g7888.t1;Parent=g7888.t1 NODE_640_length_19800_cov_43.8183 . three_prime_UTR 9617 9945 . - . ID=g7888.t1.utr3p1;Parent=g7888.t1 #PROT g7888.t1 g7888 MDIVRQSVNAFSRRAHQQSKNVIDVQPLPEDTASVAESDPVEVPAPPKEEPRHVTVLYSCVEDGLVASAVASFIRSVQVNATVLHIEDSDKAVEKAGESGAVKKDASEALGAPAGESVDRERLRKIVQSLSMCDAAVCVVSSVHEDYFEVMQFAIDSDVPLIPLVCQTEFEHAGLRLLLNQVQWSFFTRTAAADEFDTLLGALASRVVTMISMAVQKKRVAMSRPSLYQPSSGAENEQSHGGPRPTTKTRLTEIAQQEPKKIFISWAHCDREFVHHRLWRSLERAGFSCWIDVLQLAAGSRWRTEIASAVKDCEYFVFVVSPDSVRSRYCREEVEFAHAQAKKIIPIVFRDAAEAMETELSLRMLLSSFHSIDCTSDTVSGDNGLFAEGGDNNKGFNMLCEYLRGIRVAGVGASRKFVRVYLDTTTGAFPRLLPTDLKRGMSQMEYSRALQQINPVVNEWYSKETAEPPFHDACLFIIGTSLCCCMCICTSLGYMCVRRCCYDPFRASDIVELRTRTDETLKKNVQTLNKSFAHRGIEFRLAISDDKEIKSDEKEKIAAASLRYVLEIEASLR* # PASA_UPDATE: g7890.t1, single gene model update, valid-1, status:[pasa:asmbl_8637,status:3], valid-1 NODE_640_length_19800_cov_43.8183 . gene 15340 16934 . - . ID=g7890;Name=g7890.t1 NODE_640_length_19800_cov_43.8183 . mRNA 15340 16934 . - . ID=g7890.t1;Parent=g7890;Name=g7890.t1 NODE_640_length_19800_cov_43.8183 . five_prime_UTR 16857 16934 . - . ID=g7890.t1.utr5p1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . exon 16761 16934 . - . ID=g7890.t1.exon1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . CDS 16761 16856 . - 0 ID=cds.g7890.t1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . exon 16435 16533 . - . ID=g7890.t1.exon2;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . CDS 16435 16533 . - 0 ID=cds.g7890.t1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . exon 16102 16227 . - . ID=g7890.t1.exon3;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . CDS 16102 16227 . - 0 ID=cds.g7890.t1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . exon 15340 15692 . - . ID=g7890.t1.exon4;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . CDS 15534 15692 . - 0 ID=cds.g7890.t1;Parent=g7890.t1 NODE_640_length_19800_cov_43.8183 . three_prime_UTR 15340 15533 . - . ID=g7890.t1.utr3p1;Parent=g7890.t1 #PROT g7890.t1 g7890 MSKEEEHRGKALYGKQYWNPEEKKEQYRKRVEKEISLRKNHIYFKNELKDAPASEPTTYFNTHKAKEEEYLFDRVFSVKEGYCNKCHRDDKKCPHSNGQAEPAVLQEERGRVVPVRSSSEYGHRPAIDNPHNGRSLVNIIEKDFFRARGTNLQDPNGAF* # ORIGINAL: g7886.t1 original gene structure, not modified by PASA NODE_640_length_19800_cov_43.8183 AUGUSTUS gene 1083 5674 . - . ID=g7886;Name=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS mRNA 1083 5674 . - . ID=g7886.t1;Parent=g7886;Name=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 5453 5674 . - . ID=g7886.t1.exon1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 5453 5674 . - 0 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 5146 5279 . - . ID=g7886.t1.exon2;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 5146 5279 . - 0 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 4899 5060 . - . ID=g7886.t1.exon3;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 4899 5060 . - 1 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 4722 4783 . - . ID=g7886.t1.exon4;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 4722 4783 . - 1 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 4442 4552 . - . ID=g7886.t1.exon5;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 4442 4552 . - 2 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 2586 4315 . - . ID=g7886.t1.exon6;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 2586 4315 . - 2 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 2249 2386 . - . ID=g7886.t1.exon7;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 2249 2386 . - 0 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 1841 2023 . - . ID=g7886.t1.exon8;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 1841 2023 . - 0 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 1449 1536 . - . ID=g7886.t1.exon9;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 1449 1536 . - 0 ID=cds.g7886.t1;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS exon 1083 1255 . - . ID=g7886.t1.exon10;Parent=g7886.t1 NODE_640_length_19800_cov_43.8183 AUGUSTUS CDS 1083 1255 . - 2 ID=cds.g7886.t1;Parent=g7886.t1 #PROT g7886.t1 g7886 MRHNRSGRRTASESEGGASTDVTMPDELASKKNSFEQLCARLNMDATTQTAAWISLEKIFRQLHETQANEAVPMPEDKSLFTCALYHAGHAASVASIDGGTKHSNGVSLTSLLRESGLTVSMFFRELEMYGRLAHLDQSFNNWLEGMSKSYGDLGLIYDKFILAFHKVFKTGSDETDSNRLLTIIWDLFLLAKHECLGPQSDMVRAFVLLASVFNFVKTHAPTAALASQHVLSNGRRYFGDENARIASLRSLADQLSLDIVHVQTSDANHWMPVAKQLLEEGVLRGCSPDEDTDGAAPERSGGSADAHGVSNGTDEDSHLISPGLVPSVWVAGLLDTPFHIDECARSLRRVYEKICLDSDGLDERLYVSNITAPQSDVVGTPMKRHVGSPQVRHGGHRSTRDLVTDFARTTGPPATPLTAKGRVAVLSGVPGALGRPTGAVPQTPMTAAVAAVRHFQSILPAECGVPEKLSAKLDLVRAGIKGHIVDRLSRLGDLFVDAFGRNGGAGAKDRLAREYLQQAVKLFYMLLDGILADEERRAPPEVIAQFLGMDTFIPSLFAASVETTLFANDVPGFKFPWILTVLDLKPYDFYKIVEPVVRCDRAVMAAFVRHLSSIEEEVLDSMAWETGSPLLSQIRDVPSYAKVAPTSVIAHAAAGSQTPGPFGGHREPQTPGPTHLATFAPSPMRRPLPAAISTPSATPTKAPTPATPLRGGKRLTSIDLFFRRFYYLASLRIKDLCERLRISDVHRKKIWTTMEKIVTDHTQLMRDRHLDQLIMCCVYGVMKVIDEEHAFKQILAQYRQQPHAKNVYRKVLLQRGVDGEADEYGTIIQFYNDIFMGEIRNFILQFASSSSQPNSHLALSPMPVIVTPKRVYRGNVTVSPMVHRTTARTPASALRTGTPGKKVGYSIGESVGNELSTINHSVRALDFERQPNGRRATNLMNKLQDVAMKMNQNGGNPPASAIHSHVPSPKRPSDEPDEDSVQSQAKRPRLESGTDGTAE* # PASA_UPDATE: g7885.t1, single gene model update, valid-1, status:[pasa:asmbl_8631,status:12], valid-1 NODE_640_length_19800_cov_43.8183 . gene 90 468 . + . ID=g7885;Name=g7885.t1 NODE_640_length_19800_cov_43.8183 . mRNA 90 468 . + . ID=g7885.t1;Parent=g7885;Name=g7885.t1 NODE_640_length_19800_cov_43.8183 . five_prime_UTR 90 91 . + . ID=g7885.t1.utr5p1;Parent=g7885.t1 NODE_640_length_19800_cov_43.8183 . exon 90 468 . + . ID=g7885.t1.exon1;Parent=g7885.t1 NODE_640_length_19800_cov_43.8183 . CDS 92 334 . + 0 ID=cds.g7885.t1;Parent=g7885.t1;5_prime_partial=true NODE_640_length_19800_cov_43.8183 . three_prime_UTR 335 468 . + . ID=g7885.t1.utr3p1;Parent=g7885.t1 #PROT g7885.t1 g7885 SLDTRIERAEARKRRRLDEGKAALPGRMGQEIYEFKLKQAQLAADASAVGASASVTVHETDGTHVTPAATDDAQAMDECV* # PASA_UPDATE: g7889.t1, single gene model update, valid-1, status:[pasa:asmbl_8636,status:3], valid-1 NODE_640_length_19800_cov_43.8183 . gene 12291 15174 . + . ID=g7889;Name=g7889.t1 NODE_640_length_19800_cov_43.8183 . mRNA 12291 15174 . + . ID=g7889.t1;Parent=g7889;Name=g7889.t1 NODE_640_length_19800_cov_43.8183 . five_prime_UTR 12291 12466 . + . ID=g7889.t1.utr5p1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 12291 12605 . + . ID=g7889.t1.exon1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 12467 12605 . + 0 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 12823 13028 . + . ID=g7889.t1.exon2;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 12823 13028 . + 2 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 13276 13354 . + . ID=g7889.t1.exon3;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 13276 13354 . + 0 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 13571 13637 . + . ID=g7889.t1.exon4;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 13571 13637 . + 2 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 13839 14167 . + . ID=g7889.t1.exon5;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 13839 14167 . + 1 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 14349 14517 . + . ID=g7889.t1.exon6;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 14349 14517 . + 2 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . exon 14856 15174 . + . ID=g7889.t1.exon7;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . CDS 14856 15030 . + 1 ID=cds.g7889.t1;Parent=g7889.t1 NODE_640_length_19800_cov_43.8183 . three_prime_UTR 15031 15174 . + . ID=g7889.t1.utr3p1;Parent=g7889.t1 #PROT g7889.t1 g7889 MEDEGLPKNPDLALAQHRYLLNGPATADKKEAVEVTKHLMDAIKKDNMAPFYEELVAELKWEVDRPLLEEMRRANKEALAKLDATIEDAQVNQGETEVREANLAKSDYLCRIGDKANAVASFQKTFEKTISLGQRLDIIFNLIRLGLFYMDAPLIIKNIEKAKVLIEEGGDWDRRNRLRVYEGLYLLSIRDFKTATSFFLDGLATFTSYELMEYKAFVAYTVVAAMLALPRVDLRKKVMESPEILEALHDMPDIATYLRSLHDCNYAEFFRSLATIEGFLKRDRILSIHSRYYIREMRILSYAQILESYRSLTLESMATSFGVTVDFIDRELSRFIAAGRLNCKIDKVRGIVETNRPDSKNAQYQSAIRHGDLLLNRIQKLSRVINI* # ORIGINAL: g7049.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 1799 3337 . + . ID=g7049;Name=g7049.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 1799 3337 . + . ID=g7049.t1;Parent=g7049;Name=g7049.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 1799 3337 . + . ID=g7049.t1.exon1;Parent=g7049.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 1799 3337 . + 0 ID=cds.g7049.t1;Parent=g7049.t1 #PROT g7049.t1 g7049 MDPHDYTWLFGIGLVVAFIDAFGIGANDVGNSFASSVNSRALTMKQACGIAIFAEFLGALLLGANTAETIRGGILNVELFKDKPEALMLAMVCALVGSSTWVLFATKKGLPVSTTHSIVGAVLGVGISAFGINSIDWSYKTGVVRIIVSWIVSPFVAGAAASILYLITKYSVLRRQNSFRNGLFSVPVFVFVTVTINVFFIIYKGAPALKLDKRPLSWVMGVTFGTSGAATAFVTLVILPIMRYYIDASVSEEQSGFLVRFLAKYRILNRPGLTPPTPSTPTTTTTTTTTTTTTTTETQSKPKILLKKLESLVFSGVNKEIATHHQDEHSTLHAAAEHYDDNTERLYSFMQVCSATFASFAHGSNDVANAIGPLATIYSIWKFGTNMGSKVPVDNWILAYGGIAIDIGLVLYGYKIMRSLGNKMTYQSPSRGFCMELGTTLTVLGASKMGLPISTTQCITGATAAVGLCNFNRKAVNWRLLAKCFLSWLLTLPCAGLTAGLLFALLTHAPKI* # ORIGINAL: g7052.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 16204 17412 . - . ID=g7052;Name=g7052.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 16204 17412 . - . ID=g7052.t1;Parent=g7052;Name=g7052.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 16204 17412 . - . ID=g7052.t1.exon1;Parent=g7052.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 16204 17412 . - 0 ID=cds.g7052.t1;Parent=g7052.t1 #PROT g7052.t1 g7052 MDHSGGFESLGATGLLEGRSLIALAPDVSVENLEVLLAFVCTTASSAAGRAIRSNAKIREQWEALKKLRGGRKAAFVVTANTRLGDAKKNEESAQEMLHQVIKPMLSVVALDDISLHRSVKSLFGFIAYSKHPRHRFKLEPPLETFDVGPFVFYRVSPTPTVEKALLVELKTDCLNNRMEELTRLTFVNVSSLVYLVVWTSPNGPADHPDGVRVLLLTGDAPHKAIIQWLGVVYDRLAKHVQSRICRSEPTRHACTWAPMRRVHVDYMDIPHHGSTENRASSSTRPVKPLNLFHFVSASTYMWSSDGGELHGPKMGSELLYDIAEAHEGFTTTNPKDSAGVYLTFSQFIDVPAVRKCLPDDSAFFQVKLLGDKDADRVSKGDGWVYNIRSGNVIPLRDEPAI* # ORIGINAL: g7050.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 4525 5232 . - . ID=g7050;Name=g7050.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 4525 5232 . - . ID=g7050.t1;Parent=g7050;Name=g7050.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 4525 5232 . - . ID=g7050.t1.exon1;Parent=g7050.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 4525 5232 . - 0 ID=cds.g7050.t1;Parent=g7050.t1 #PROT g7050.t1 g7050 MECRIAKLLLLEKPTSLVGVRAVIESVSPAVIVFDLCDGDLYDEKMRLNMTLADIRKAVITIVTGLTFMEKHGLVHCDVKLENVLWKTTAGQTQYYLADFGLAQKQTQDGVQSGGTPPMIPPEMYFRHTGSTDQIVVDGRVDSWAVGILTAELLLGEQLDEDAYADIDSIISNATRKIANKETRMHALQFLKACLAPCDQRPLPSQLLDQPWARTAAPPRCNEGRTDRRATTVQD* # ORIGINAL: g7054.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 20352 20960 . - . ID=g7054;Name=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 20352 20960 . - . ID=g7054.t1;Parent=g7054;Name=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 20782 20960 . - . ID=g7054.t1.exon1;Parent=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 20782 20960 . - 0 ID=cds.g7054.t1;Parent=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 20498 20569 . - . ID=g7054.t1.exon2;Parent=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 20498 20569 . - 1 ID=cds.g7054.t1;Parent=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 20352 20427 . - . ID=g7054.t1.exon3;Parent=g7054.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 20352 20427 . - 1 ID=cds.g7054.t1;Parent=g7054.t1 #PROT g7054.t1 g7054 MTYVVLQFGDRDDAGRDWDVVVKPADISFARFAARSDLHSNQIATLPAGIFDKLTALTQLTLYSNQIAILPAGIFDKLTALTQLILYSNQIATLPTGIFDKLTALTQL* # ORIGINAL: g7053.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 18147 19188 . - . ID=g7053;Name=g7053.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 18147 19188 . - . ID=g7053.t1;Parent=g7053;Name=g7053.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 18804 19188 . - . ID=g7053.t1.exon1;Parent=g7053.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 18804 19188 . - 0 ID=cds.g7053.t1;Parent=g7053.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 18147 18664 . - . ID=g7053.t1.exon2;Parent=g7053.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 18147 18664 . - 2 ID=cds.g7053.t1;Parent=g7053.t1 #PROT g7053.t1 g7053 MTMTRLIIMLIAACTCANGGVCHDGVLGDGSCDCSAVLGMAGPSCNTACDQLGGPHQMFGNGCQSYCLCRNGSSTCDSITGQCTCAIGWTNMICDKIIPPSTPTLNASAESSTYGIGIRLRWSPPDALEVTGDVFDYLDREVILNQGYAYSITAYNGANVSSDASDLAAIKSLQKMDPSSKPYEITLTATLTPETSSNDLVHVEGRHEQRSHRAVVHLWRRSIPRVPVGRTYEYEIISQNKYGNSTSERKLGTASIAPPSTASEPSSSSTNVAGPVAGGVIGAVVGAGALVLAILFFRKR* # ORIGINAL: g7048.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 197 566 . - . ID=g7048;Name=g7048.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 197 566 . - . ID=g7048.t1;Parent=g7048;Name=g7048.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 197 566 . - . ID=g7048.t1.exon1;Parent=g7048.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 197 566 . - 0 ID=cds.g7048.t1;Parent=g7048.t1 #PROT g7048.t1 g7048 MRFTVSISRPVVPVAPVAPVQFGGSAQRKPTKKTATNKAEAVSTPPSIDPAILTEIKKREEQSERLKLLNENPNVDAKIAALTELLMDFVKANGRMIYGGMAIHQHLMEKTGRGIYVGNVYPD # ORIGINAL: g7055.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 21907 26388 . - . ID=g7055;Name=g7055.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 21907 26388 . - . ID=g7055.t1;Parent=g7055;Name=g7055.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 21907 26388 . - . ID=g7055.t1.exon1;Parent=g7055.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 21907 26388 . - 0 ID=cds.g7055.t1;Parent=g7055.t1 #PROT g7055.t1 g7055 MASSSQGAREGLRSALTTNDVTREVSGVQFSLVSNDEKRKYYEVIHPVTISSNQEILVRGLADGHMGASPGQRHIPCEECGCGWETCPGHVGRIHLKQDIIHPYAKRTVQNVLQVICIACKTPYFAHQPDLMAKIQKYDASIRLTTLKECLKGVKECPACLHPRPVIKQPPKRMLSDAMKIKDDTPPGYFYIVEYPTTKEYPHARRDYLTPEKCRAAFVNIKDPGHLRTMGFSPEHSSPESLIFDDLVIGPNNIRPMLQSPNGVYETDFTHICANILKKIKEGEYHRNAGDQGDLHKKYATMVHILVNRMFTNDENDMAVGFSNGHKLKSLKELIGVGKASHIRQHLNAKRCDGTGRTVITGNPNMSITQVGVPVTMAKILTVREVVTYNNIAQLQEMVKRGPDGYPGAQNIVRRRKGQMFSLVTENSRQMVLEIGDKVDRHMVDGDPVLMNRQPSLHKMNMMCFYAKIMHDTLTFNLHPADTKPFNADFDGDEMNVHVPQSAHARFELEYLSNVKTNIVSAGKSMTSISLIQDWRSAACQMTKDNITLDKIHVARLIAGCKLDEEQRAKMVAVMADVSKTLVTAHEIISIILPASLCMKRKDYEIRNGNLIRGFFGNSAIGESSNNVIHVINNQFGEDAAVRFINNMVFISNNYLLIRGLTLGLSDIVLAPDVEKKCMDLIETTVKEVTCMYKDFQANADIINPLLNEMNMFDMLSVVRADCGKIIEDRHKADAENGPIKNSMYAMAFSKAKGSSVNSAQICALMGQQELGSLPERFKKTCNQRTLPCFAKNDDSPEARGFVRSSLGRGLNPAEFIMHAIAGRVGMINGAIKTSETGYIARKFVKGMEDIMRHHDGTVRSANLNIVQFTYGDVNMDSSKNEFQTCRLLKHATVDEMKAAYSFPADSTNEGYMEKLGQMWLRARKIACAISGRSNPIIQWSSHTFYSPVNLGYILDCVLASNRQQGGELILTPQHVHASIESILSDANAQMLYYGAGSQGALAQRDNRRSSETFEILLNATFAPKLCIDEYKLNKAEFDKMMEEIKARHVMAMVQAGEMVGILAAQFIGEPTTQATLDSFHSTGIGKVQRPDKTQIRLHDILACSKNPKVPVMFLFLEDKIRFDRSKADQIKTMLNTTVFGDIVESMQVFWDPAVQYAEEDNITDVSFSLSSLNKELKPRDLPWLFRIQLNREQVSEKGVSMLDIKLKFLQFLRGVLGKSIKKAAEKYLPQLVNRCMMLTNDDNSKSPIVHVRFDLVGVEAAFTPRCLDYIAHFHTMLMEKITLNGIAGIKSVEVDEWVDYKTPDGPKEYVLFTRGVNMVDIRYIRGLNLERSYTNSMHDNLPMFGVEVTRDIMLTEFRQFSGLSDVNYQHFAVLVDFMTHTGSLTAVNRHGINKLASRAPLAKASFEEAVDVLMEAGIHGERDDLTSVSSNVILGQRIRAGTGLCDIGINPKLLRRTAGTAGPTSLSMLQPDPFIEDIMSVPPLPTGFQAPN* # ORIGINAL: g7051.t1 original gene structure, not modified by PASA NODE_341_length_26463_cov_44.5601 AUGUSTUS gene 7061 7747 . + . ID=g7051;Name=g7051.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS mRNA 7061 7747 . + . ID=g7051.t1;Parent=g7051;Name=g7051.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS exon 7061 7747 . + . ID=g7051.t1.exon1;Parent=g7051.t1 NODE_341_length_26463_cov_44.5601 AUGUSTUS CDS 7061 7747 . + 0 ID=cds.g7051.t1;Parent=g7051.t1 #PROT g7051.t1 g7051 MDDTDSSYLDIGEHDDNRDNHDNHDNRDNRDNNDNRDNRDNRDNRDNSNNLLKITPYYMARLVEHIVNEGYTESKICEMLVQCSHPKEFEAMFVEILLVSGAWSVETVNMIAPVLSCNWLTVVKRHIIGLEIEKLDYEFVESNQHCKAIPDCAICLQQIKTKKSRTYLHCSHVFHRMCINRVIKTKESDDLNDFAKCPLCRSLLVPATTRLRAIRNAMVARTAAPPRC* # PASA_UPDATE: g9160.t1, single gene model update, valid-1, status:[pasa:asmbl_8080,status:12], valid-1 NODE_5457_length_842_cov_25.9087 . gene 1 831 . - . ID=g9160;Name=g9160.t1 NODE_5457_length_842_cov_25.9087 . mRNA 1 831 . - . ID=g9160.t1;Parent=g9160;Name=g9160.t1 NODE_5457_length_842_cov_25.9087 . five_prime_UTR 804 831 . - . ID=g9160.t1.utr5p1;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . exon 659 831 . - . ID=g9160.t1.exon1;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . CDS 659 803 . - 0 ID=cds.g9160.t1;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . exon 293 429 . - . ID=g9160.t1.exon2;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . CDS 293 429 . - 2 ID=cds.g9160.t1;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . exon 1 24 . - . ID=g9160.t1.exon3;Parent=g9160.t1 NODE_5457_length_842_cov_25.9087 . CDS 1 24 . - 0 ID=cds.g9160.t1;Parent=g9160.t1;3_prime_partial=true #PROT g9160.t1 g9160 MLPLNYTVDQSNPDTQFLFTSVGLFVATTGTLVLIFGPKAYMYITQDTEAAKSGMTSASRTSSMSQGGSEGSTVDGQVNELRVQKMEMDNMELKNKYDTAVK # ORIGINAL: g13291.t1 original gene structure, not modified by PASA NODE_1222_length_12921_cov_36.7658 AUGUSTUS gene 7495 8983 . + . ID=g13291;Name=g13291.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS mRNA 7495 8983 . + . ID=g13291.t1;Parent=g13291;Name=g13291.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 7495 7549 . + . ID=g13291.t1.exon1;Parent=g13291.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 7495 7549 . + 0 ID=cds.g13291.t1;Parent=g13291.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 7968 8983 . + . ID=g13291.t1.exon2;Parent=g13291.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 7968 8983 . + 2 ID=cds.g13291.t1;Parent=g13291.t1 #PROT g13291.t1 g13291 MVRWGILGTGKIAADFVSAIQHVPGAVVVAVGSRSESSAAAFASRFSVAHHHGSYEGVASNPAVDVIYVATPHSHHRDNARLCLEAGKHVLCEKAFAVNAAEAEEMIELARSKGLFLMEAMWTRFFPLVRALRKIIDDDEIGTVNLVQGNFSFTMPHGVDRLIKPELGAGALLDIGIYLVSFSSLVFGGGAPTKVTAEGDINAHGVDDAVTMSISYHHGRRAILWCATTGATESELRIHGTKGSIRLHHPFWCPTEMTVTREGTPFGRKDVTTTTYPLPACHATYNFTNSVGLSYEAAEVERCIRDGRHESPEMPLTETLHIMRTLDAVRKAIGLRYPADDITAATDKTTATAIVP* # PASA_UPDATE: g13290.t1, single gene model update, valid-1, status:[pasa:asmbl_856,status:3], valid-1 NODE_1222_length_12921_cov_36.7658 . gene 4696 7116 . - . ID=g13290;Name=g13290.t1 NODE_1222_length_12921_cov_36.7658 . mRNA 4696 7116 . - . ID=g13290.t1;Parent=g13290;Name=g13290.t1 NODE_1222_length_12921_cov_36.7658 . five_prime_UTR 7029 7116 . - . ID=g13290.t1.utr5p1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 6963 7116 . - . ID=g13290.t1.exon1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 6963 7028 . - 0 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 6461 6646 . - . ID=g13290.t1.exon2;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 6461 6646 . - 0 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 6164 6254 . - . ID=g13290.t1.exon3;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 6164 6254 . - 0 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 5782 5979 . - . ID=g13290.t1.exon4;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 5782 5979 . - 2 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 5340 5435 . - . ID=g13290.t1.exon5;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 5340 5435 . - 2 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . exon 4696 5235 . - . ID=g13290.t1.exon6;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . CDS 4901 5235 . - 2 ID=cds.g13290.t1;Parent=g13290.t1 NODE_1222_length_12921_cov_36.7658 . three_prime_UTR 4696 4900 . - . ID=g13290.t1.utr3p1;Parent=g13290.t1 #PROT g13290.t1 g13290 MSAAGRAVWTTVARGLPSMLRWTPHAMPIAPVASIARLQSNIVARAGSTRPLSSVRLFGSTSRVFTASEKEHAQAQARRLQGSGPVTWASLAGLVVAGGIVVYYLREEKRRIKEEAEKSRTEPIGRPKIGGPFSLIDQNGKRVTDEDFLGKWLLIYFGFTFCPDVCPDELNKMAEILANLDAMPGIGPVVQPLFISIDPQRDTPEKIAAYLKEFHPRLIGLTGTTEEIARVAKAYRVYFSVSPAPDEDYLVDHTIIQYLIGPDGQFSTYFGQNVSSQEASLRIANEVMTHNANQKQNARATSGGSVAPNEATSAVPSTKVAVA* # ORIGINAL: g13289.t1 original gene structure, not modified by PASA NODE_1222_length_12921_cov_36.7658 AUGUSTUS gene 260 4004 . + . ID=g13289;Name=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS mRNA 260 4004 . + . ID=g13289.t1;Parent=g13289;Name=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 260 496 . + . ID=g13289.t1.exon1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 260 496 . + 0 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 715 1009 . + . ID=g13289.t1.exon2;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 715 1009 . + 0 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 1296 1454 . + . ID=g13289.t1.exon3;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 1296 1454 . + 2 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 1943 2070 . + . ID=g13289.t1.exon4;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 1943 2070 . + 2 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 2375 2556 . + . ID=g13289.t1.exon5;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 2375 2556 . + 0 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 2799 2925 . + . ID=g13289.t1.exon6;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 2799 2925 . + 1 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 3264 3359 . + . ID=g13289.t1.exon7;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 3264 3359 . + 0 ID=cds.g13289.t1;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS exon 3720 4004 . + . ID=g13289.t1.exon8;Parent=g13289.t1 NODE_1222_length_12921_cov_36.7658 AUGUSTUS CDS 3720 4004 . + 0 ID=cds.g13289.t1;Parent=g13289.t1 #PROT g13289.t1 g13289 MRACIALVAILALSSSVSVFCDARGAADREHEERSERRRDEALAKFRDWFAENGGVANKVQVQRINPRDVGVVALEDIAAGETVLSVPLSLIVTREDAMGSFLEKYYEEVDGETNFMALYIIYENSRPESKWRAYWDALPHTVYSTLWFGDFEYEKMQASRVKEFSIQRSLAIIKAHERILEKIIEANPVDFPYPMLYFRGSFQWALSIIWSRTFSIRVLDTEDQWQKTAGLVPYADFVNTNVESLLNIDCKTNDAGSHFECYATQDIAQGGQLYGPYGSSKEAMPNGRLLMDYGFLLPNTEHDVALVEPPQWTDRVPDADKKKAVLETLGIADVPIFHIVRNKGIDIAMMAYFRVLCATSVSLADPNYLAQQLQKGVALSDEEEECTFGLLRRYLQDALDSYGSTIDTDRREVEKLRKRSYLGKEQLNLINIGLLRIGEKVAIYDALNGVGAANKKYNLNSVYEPIFPTTTTTPSKNASNAKADSDSKTATDEKEAKHDEL* # PASA_UPDATE: g13292.t1, single gene model update, valid-1, status:[pasa:asmbl_857,status:12],[pasa:asmbl_859,status:12], valid-1 NODE_1222_length_12921_cov_36.7658 . gene 9277 12742 . - . ID=g13292;Name=g13292.t1 NODE_1222_length_12921_cov_36.7658 . mRNA 9277 12742 . - . ID=g13292.t1;Parent=g13292;Name=g13292.t1 NODE_1222_length_12921_cov_36.7658 . five_prime_UTR 12617 12742 . - . ID=g13292.t1.utr5p1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . exon 11879 12742 . - . ID=g13292.t1.exon1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . CDS 11879 12616 . - 0 ID=cds.g13292.t1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . exon 11396 11508 . - . ID=g13292.t1.exon2;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . CDS 11396 11508 . - 0 ID=cds.g13292.t1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . exon 11009 11129 . - . ID=g13292.t1.exon3;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . CDS 11009 11129 . - 1 ID=cds.g13292.t1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . exon 10469 10680 . - . ID=g13292.t1.exon4;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . CDS 10469 10680 . - 0 ID=cds.g13292.t1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . exon 9277 10101 . - . ID=g13292.t1.exon5;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . CDS 9513 10101 . - 1 ID=cds.g13292.t1;Parent=g13292.t1 NODE_1222_length_12921_cov_36.7658 . three_prime_UTR 9277 9512 . - . ID=g13292.t1.utr3p1;Parent=g13292.t1 #PROT g13292.t1 g13292 MYSRPHIAFRVSATTSVNSSVSALSYASVIKSVDSSDSGVDASPASPALSSHSPYEDDVPPTTEDEARVVGISNGNDNNSNAQCENNKDVACDAASVLMRTVRNASEEIASDGSVRASKLTVEVESKVVVRSHSAPASVPAASDVGTSRDAGSSRDAVESNNVCHGAPLPPRPFSPGRDEGWQLYDCRTEFSRQGLSQYAQWRLTTANADYAVCASYPATIGVPSVMDDAAIAAVAQFRSNGRFPALSWIHPLSGAVIARSGQPYSGVRGTRSNEDEAMLRAIRDANPVGGPLCIMDARSKMYAFFNLARGGGYETSDSYDGARVDFLGIANIHVMRESMRSLREIVKPPIDDDRWLGNLERTQWLYHVRTVLDGATKIARIVATDSLSVLIHCSDGWDRTAQLSSLAMLMLDAYYRTIVGFEVLVEKEWIAFGHRFEERLGHGAEEGADGDQRSPVFLQFLDCVHQVVRQFPTAFEYGESLLVRIADGAQGAMHGTFLFNCERDRESARVRQLTGSLWTEINADMARYKNSTYRCVHDPIVPIAKIHALAFWSKYFLRYSATPNSVTSSSLDDVMQCVDGAPAGGLPLD* # ORIGINAL: g1996.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 6208 6672 . - . ID=g1996;Name=g1996.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 6208 6672 . - . ID=g1996.t1;Parent=g1996;Name=g1996.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 6208 6672 . - . ID=g1996.t1.exon1;Parent=g1996.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 6208 6672 . - 0 ID=cds.g1996.t1;Parent=g1996.t1 #PROT g1996.t1 g1996 MTSRRRHVRAHVTFDFSYHVTILLHIYSEISWIYKTSKTERPDTRKKEHILSTYEHDKDSAAEIIDVINTHMALMTSTDNAYRGATMQTIAGEKDVYVYPHGMLAKVAHCAGSQPETSYVSIQDAHGFSGRYTTLTIYLVFLSTTFDSYGMIEQ* # ORIGINAL: g1994.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 4246 5193 . + . ID=g1994;Name=g1994.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 4246 5193 . + . ID=g1994.t1;Parent=g1994;Name=g1994.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 4246 5193 . + . ID=g1994.t1.exon1;Parent=g1994.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 4246 5193 . + 0 ID=cds.g1994.t1;Parent=g1994.t1 #PROT g1994.t1 g1994 MAARVPVDFGGTPFQRTPPDPALQASAEPQLSADMQNCNLGRLRKEQSLGKFGITARNVSFTFPSVSKDAAGTASTVLVWNFAQKPELATDINVVTKRTGTITAIHVTDRYNNSKIPLGVRISIVDPSNGNITTFPFKSTTRRNNQQVQWHCTLPPNGAREDDVSVFELDDFTAFNKLKWMHFTVKDIEDMCTQDTRAPYKIRDELGGGDIWQTQATSPLGDRAQKWKAELGLDLLYYKEFDYMWMRKADRDKVLTKFKAGILSDLNYKVGGGRYMEVTIEPLKCSWSALESYDDPNTPINAGLDIRVEFVFNSD* # ORIGINAL: g1995.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 5302 6111 . - . ID=g1995;Name=g1995.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 5302 6111 . - . ID=g1995.t1;Parent=g1995;Name=g1995.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 5302 6111 . - . ID=g1995.t1.exon1;Parent=g1995.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 5302 6111 . - 0 ID=cds.g1995.t1;Parent=g1995.t1 #PROT g1995.t1 g1995 MGDLVNLMTFEIEYATYRELQDKLSANNVYGLAVMVGGFAPSLESTIAKEEQASVKSANVSTPTNRLGLWTVCQVDVPQVFANRAASSQSVGERIRTRLTNEQDISAFMHVSPELQDAFTAGMRTSINDSTDAHAVTQGNNLNVITTSASAVPSGYGCLAPSGKAIFRMNPVLFACMTDAAFHVKQHLSLSTSVSTIVNRILTLQMARLTFAKIIANLINLTLATSPSMTTSTMAYSNGRNPSMLMQWTEHYNRQVVLGLMQLQRDVSF* # ORIGINAL: g1993.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 3052 4080 . + . ID=g1993;Name=g1993.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 3052 4080 . + . ID=g1993.t1;Parent=g1993;Name=g1993.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 3052 4080 . + . ID=g1993.t1.exon1;Parent=g1993.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 3052 4080 . + 0 ID=cds.g1993.t1;Parent=g1993.t1 #PROT g1993.t1 g1993 MAPANKIPFGYACRAGTKLRVKYEADSDIDDSACAICLHCNKSAFNEKKCSYLALVGYYYPNAAAKTAEISVEMRLLCEPCMCQMYPKVMDSIPANTDANAHWYIYQEIHPFLARSVYGGISAHTCELNRTEDNRFDDKNVLSVYDVWVDAAKAHLDKVSASDVVTLCAILGVVPETPVNPDEDICVKIDSLRIASATELDARSAASPSDLADSFHVSLINSIPFEDIVSSMKQTYKPPKPVKINELPEHLQAFAKKITTCQRLLMRTIHEDSPNTPVIPIDVFLYVPDVAIKALLTLCDGAVEAWTREQAKEGFTILQPKIDTVTKVAVALREELSRVTKK* # ORIGINAL: g1991.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 13 2178 . + . ID=g1991;Name=g1991.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 13 2178 . + . ID=g1991.t1;Parent=g1991;Name=g1991.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 13 2178 . + . ID=g1991.t1.exon1;Parent=g1991.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 13 2178 . + 0 ID=cds.g1991.t1;Parent=g1991.t1 #PROT g1991.t1 g1991 MRQYGHFYHRFIYSDETPAALAKSAHMTQDDLTFVFKTIRALWHSEEVAHGVDRNRFAAPAQCEQYAMLAAATLNELSQGSRFVAMERLCMAERSMGPNTYVCTFVNALYNGAFTMLSKATRPMGAMDVHESLAATIGRDNYAVIGTVWKYRNQDAMSHNPIARFVKPGVIVVFRTKEFADIANVIGETRQHVSAGRYSPGILASIALQAFSVFREVIANAMWSLHTLLMQYGLRRDGTPVPECSRALKCIVADVVRDGSCGERESHMLVRAFQVLFIRLWKDSETPYKEKLEMVWTFLRIRPAGKFIVPHQACIDFMKNAHPFMEMDPLVRDIWTLLQAQVFGNDKPRYGSNKDHALLQSGDMDSCALRVHPVAILAMLMAFPKKVDSQNVCIGAHAYALFTMIRVVEMDCIDPPKLRYGLFNGSDPVGPLYQLSHTLNASGCVYKPMAKLVYSTENLFPFQIAATDEGVDVPPSGGRTKPISADYNAVYDSHYTSVVNIIGPIFAADQAVGDILRSCTTAAKLYAEVSKMSVDENETNARGLCGSSAIHVGIPIPVVKVPVGQMGEGNSIQYAPFAIGSTMLETASCTTAWDPREHLLNLAARCNSAFVRGNSPDAETVQFSQRTWPRGTFALSTNEAAAKLANDHLFYTKDYFTHALNPTTDSADILQKGLQHYLYPLGHIQHTYRHTSHAMIYHYDYAWITSVLSSYRDALLRTKRQ* # ORIGINAL: g1997.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 6908 7782 . + . ID=g1997;Name=g1997.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 6908 7782 . + . ID=g1997.t1;Parent=g1997;Name=g1997.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 6908 7625 . + . ID=g1997.t1.exon1;Parent=g1997.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 6908 7625 . + 0 ID=cds.g1997.t1;Parent=g1997.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 7757 7782 . + . ID=g1997.t1.exon2;Parent=g1997.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 7757 7782 . + 2 ID=cds.g1997.t1;Parent=g1997.t1 #PROT g1997.t1 g1997 MALSLGSFRYDPGWSVSNATLEGASSAGELDRVLVASFCLRATNPHQARVLTVACTLLITKFERPASLLITLHGRSVDVFHRDAEVEVKVNFVTSSSTFEELEAARAGSELSFELNGDVTSVLVAHSHDPSLHSVYVSRLWNPTFMRMSRSDWRTKVLQKVLPSAANFGVLEFPILNAPTCPAGLNASIRAIVSSIVRDIESILKDLPDARFDSVQRNTMRVLRHITDLLNWSPPLDESALGLPAPC* # PASA_UPDATE: g1998.t1, single gene model update, valid-1, status:[pasa:asmbl_2608,status:12], valid-1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant . gene 7951 8956 . - . ID=g1998;Name=g1998.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant . mRNA 7951 8956 . - . ID=g1998.t1;Parent=g1998;Name=g1998.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant . exon 7951 8956 . - . ID=g1998.t1.exon1;Parent=g1998.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant . CDS 7964 8956 . - 0 ID=cds.g1998.t1;Parent=g1998.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant . three_prime_UTR 7951 7963 . - . ID=g1998.t1.utr3p1;Parent=g1998.t1 #PROT g1998.t1 g1998 MATQLSVGIPTFTVTWPLKSPVAISAADGAGLLDRTLSVTCDLGNPGRYVTRARFLSATVRLVVWRKEKNGNRVLLTTLLSAPASVSQHSLENGHWPVTVTAGVHMTAASLAELEAARAGMDLVFCVNVDVTAIINDSVYVSSTTAVEAPFTATEWRVLVDRMQPNASKSYMVFEFPPLDASLFPERTSDVINVIVEKITAVPDALRVGNYERAAVEIRKAIEKTEALLKRIIMSPADSRGEDWVETFRERLDEFDKNLYHPKENNYPSRFECYVVVLEQAAKINHFLLHSAANDRFETSNGAQVVIPAIAYILNTAANFLHTNPGIAFQ* # ORIGINAL: g1992.t1 original gene structure, not modified by PASA NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS gene 2206 2856 . - . ID=g1992;Name=g1992.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS mRNA 2206 2856 . - . ID=g1992.t1;Parent=g1992;Name=g1992.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS exon 2206 2856 . - . ID=g1992.t1.exon1;Parent=g1992.t1 NODE_1784_length_9265_cov_44.1457_potentialcontaminant AUGUSTUS CDS 2206 2856 . - 0 ID=cds.g1992.t1;Parent=g1992.t1 #PROT g1992.t1 g1992 MPDAAGRIIVIGQVDEHYRMLPCVVHALEETILKIASEELYSRVPRIIERIVAVTTCRILRTAVAMVAQRIRIEFRHFISATAIKETVLERFWSTTRLVTFGTEFHQNPDMDPLVDAYAGSTTPVAIDFDGAYKALVKGTLIPRGSTTPLRSFDDDKENMPSGGTKLPLRRIAYLKRLHAFANPPNPSSRFWMRVATEMHTRNALRLPVTDVRQHR* # PASA_UPDATE: g324.t1, single gene model update, valid-1, status:[pasa:asmbl_4832,status:12], valid-1 NODE_2699_length_5414_cov_40.7578 . gene 3932 5281 . - . ID=g324;Name=g324.t1 NODE_2699_length_5414_cov_40.7578 . mRNA 3932 5281 . - . ID=g324.t1;Parent=g324;Name=g324.t1 NODE_2699_length_5414_cov_40.7578 . five_prime_UTR 5266 5281 . - . ID=g324.t1.utr5p1;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . exon 5185 5281 . - . ID=g324.t1.exon1;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . CDS 5185 5265 . - 0 ID=cds.g324.t1;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . exon 4606 4993 . - . ID=g324.t1.exon2;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . CDS 4606 4993 . - 0 ID=cds.g324.t1;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . exon 3932 4251 . - . ID=g324.t1.exon3;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . CDS 4118 4251 . - 2 ID=cds.g324.t1;Parent=g324.t1 NODE_2699_length_5414_cov_40.7578 . three_prime_UTR 3932 4117 . - . ID=g324.t1.utr3p1;Parent=g324.t1 #PROT g324.t1 g324 MLFIVTGDLLIFRDGKPTFVRACSEKTCVEMPFIGQCYMWNMGHAEPVSVPKYFPSVTDVNYSMGFGTGSEAFTFPGWLGLFKYARVKDWVVTAFGYGMHYLVGDKHKPSNGSLRIDVTGLKDGAMVTRSAFAEAGMRNSTGLSLAVGATLLGRKDGLLTSEPGTYAVEGLLDPIAFLRGLKEKGLTAYEDVKMTREYQI* # ORIGINAL: g322.t1 original gene structure, not modified by PASA NODE_2699_length_5414_cov_40.7578 AUGUSTUS gene 123 529 . + . ID=g322;Name=g322.t1 NODE_2699_length_5414_cov_40.7578 AUGUSTUS mRNA 123 529 . + . ID=g322.t1;Parent=g322;Name=g322.t1 NODE_2699_length_5414_cov_40.7578 AUGUSTUS exon 123 205 . + . ID=g322.t1.exon1;Parent=g322.t1 NODE_2699_length_5414_cov_40.7578 AUGUSTUS CDS 123 205 . + 0 ID=cds.g322.t1;Parent=g322.t1 NODE_2699_length_5414_cov_40.7578 AUGUSTUS exon 430 529 . + . ID=g322.t1.exon2;Parent=g322.t1 NODE_2699_length_5414_cov_40.7578 AUGUSTUS CDS 430 529 . + 1 ID=cds.g322.t1;Parent=g322.t1 #PROT g322.t1 g322 WEPTNHEVLLVGYGEEAGVPFWIVKNSWGRHFGEGGFFRIRRGTDECGIESGATWVIPSL* # PASA_UPDATE: g323.t1, single gene model update, valid-1, status:[pasa:asmbl_4831,status:3], valid-1 NODE_2699_length_5414_cov_40.7578 . gene 855 3563 . - . ID=g323;Name=g323.t1 NODE_2699_length_5414_cov_40.7578 . mRNA 855 3563 . - . ID=g323.t1;Parent=g323;Name=g323.t1 NODE_2699_length_5414_cov_40.7578 . five_prime_UTR 3322 3563 . - . ID=g323.t1.utr5p1;Parent=g323.t1 NODE_2699_length_5414_cov_40.7578 . exon 1791 3563 . - . ID=g323.t1.exon1;Parent=g323.t1 NODE_2699_length_5414_cov_40.7578 . CDS 1791 3321 . - 0 ID=cds.g323.t1;Parent=g323.t1 NODE_2699_length_5414_cov_40.7578 . exon 855 1439 . - . ID=g323.t1.exon2;Parent=g323.t1 NODE_2699_length_5414_cov_40.7578 . CDS 1093 1439 . - 2 ID=cds.g323.t1;Parent=g323.t1 NODE_2699_length_5414_cov_40.7578 . three_prime_UTR 855 1092 . - . ID=g323.t1.utr3p1;Parent=g323.t1 #PROT g323.t1 g323 MAMPSCRTSLGCFLIAYLTLSGSLLLFFVLDFDPTHTEEHKQRAPLRFAHHVTSASQGDGRLEQRDIEEITNATASELSIALSSLFSAMRASPLKQADEVILFATRIPLFDRDGGDLRVLKLAKSICALDLTVRFVAMQKWPNTRLYHRRALESVCPSHLFSIHRPNDVPRLVDAIRDRHAAVLAFTRNTSLQVGEMRTAGDVGQELTVRPRGGLLAAIYHTRYLNWPSESSAFTKFARLIRARLPDSVAIVARDEVMWEKVSRARSQGNVDAGDAFSEESRDRDVVSDMMKDEKVLLSGCDYAIMASESDVKAAAQFTSLPQSGFGVVRFAYEREDGIVLNKAGITQGLSLSHQSPSHDAAGRPRIDSGMPGGVGSLGSTSGDRSFAMDFESRVNLLYLGAGSGNSDSSGALTWFVVHVLPIVRASLPAIGVDVIGGVQLRLPGFSSKSLSGDENGKKGKKAAGQPDVVAGAAGVDPRADGVTLIGHVDDLTRPMGMHRVFLSPMRNGGGLTTKNVVAIAHGLPVVTTSIGALGLPHAKGATLERALELSHRYLLPFIVADTPADFARATIALYTNKDLWTHLHRNCQLYARGHFADEHGASDVANAIAAGLRRNSERAVARLF* # PASA_UPDATE: g7254.t1, single gene model update, valid-1, status:[pasa:asmbl_1860,status:12],[pasa:asmbl_1861,status:12],[pasa:asmbl_1862,status:12], valid-1 NODE_1524_length_10737_cov_38.0984 . gene 2195 10549 . + . ID=g7254;Name=g7254.t1 NODE_1524_length_10737_cov_38.0984 . mRNA 2195 10549 . + . ID=g7254.t1;Parent=g7254;Name=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 2195 2280 . + . ID=g7254.t1.exon1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 2195 2280 . + 0 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 2601 2744 . + . ID=g7254.t1.exon2;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 2601 2744 . + 1 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 3031 3131 . + . ID=g7254.t1.exon3;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 3031 3131 . + 1 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 3445 3527 . + . ID=g7254.t1.exon4;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 3445 3527 . + 2 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 3872 3998 . + . ID=g7254.t1.exon5;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 3872 3998 . + 0 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 4399 4706 . + . ID=g7254.t1.exon6;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 4399 4706 . + 2 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 4888 8109 . + . ID=g7254.t1.exon7;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 4888 8109 . + 0 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 8306 8508 . + . ID=g7254.t1.exon8;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 8306 8508 . + 0 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 8858 9024 . + . ID=g7254.t1.exon9;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 8858 9024 . + 1 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 9415 9573 . + . ID=g7254.t1.exon10;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 9415 9573 . + 2 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 9753 10363 . + . ID=g7254.t1.exon11;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 9753 10363 . + 2 ID=cds.g7254.t1;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . exon 10535 10549 . + . ID=g7254.t1.exon12;Parent=g7254.t1 NODE_1524_length_10737_cov_38.0984 . CDS 10535 10549 . + 0 ID=cds.g7254.t1;Parent=g7254.t1 #PROT g7254.t1 g7254 MNIVKNILGRTASPTVPVAHDKEKNDKRMEALLQVRKLFAEHGQCKTDEEKDARLDAIVPLFVKSFDGVDPKEYTQRFHEIRAFAFCVGRRLAKEVKQRASNQSRQDASKAIYDYFVSSRSDLGFQMLKASSILLLGDLLPLSLQSQVIEAVCQAALPSTLVKALYLFIDLPVIDTTPPKEGPADHHAEFRETFRLLLQSMCPHLAVTEELSKTDSLLILFRVVTIRCPRHNWLWRAAAQDVIVKLASSGQNGTTMTYAHRKACMSQAVKGIGKAEHSEPCEMVDMLVTVFVCLRESAKTSRMLLDDFADAKGWHVPGEIVARLAAMPGGFHGNAEAQSGLESVVRTLAQLCFSGPSALRPQPPRNLAFQDPRFVLPMPAQGEALGVRNISAFQCLQSLVLNPSTLPLADASSADAGFSPSADMAVWSEVLDAVFQIYSTEPANYFILEPQHTLALFVERIDFLSPPLKLRVFKMIEYVVCSLNFVPLPELVALGTQLQKAAQVETVAYALTTLMKLMNFDAKYANVFREVGILDVIVGGVRAVADAEDPLSTSDGGGSSNNSYNSPWLAPENQSALLECAAQAIDSNTANARVFRTAGGSTAVHGLIRHSATHRHDALRIAQKLIRDDCTHGGAKGDLGVLLETLQHMPTQEPTARADVLRTIVRCLQPDDESRHVFRELGGFVNVISVLVSLEDAFLEVRESNGTQTQDTKDTKDGSNVAHSATGLSGGSVNVDLLRACFQTLTAALSGCPANKHFFRTDVGYGSLCESLRMLGVLGVSASSQLFDILFDFALEQLPRRRNTFDGSAHLRPSPSLVMAEAMMPSLSGGVTGAQSGAGASGVGASVVIADAPPIANPEVITVIARLLPSAPIDTQAAVLDRLASVLSTQANQLAVAAQGLVGTLLENYKEVFVAACTQQKTTPAVGGDKEALFGRALAVVEAVGACGMSPREIRAFFKLGVGLPLPQLLLSAAAMTTESSAAVMTTDSDDTDDDASPANAASVDTLHTCGPLARPMLDALSHMAARGCTMSPHVEFDMRGLGYGCVTVPSLGDQRAWPPANGLSVCMWVWIEQFSTSADAHPVRLFTINDDGRPAGNASISSDDRTIVVACGAPGTSPVRFDRHPFAERRWYHVTVCFTRSRLKGTSVVLYVDGKAIDSMKTSYIPGPATGFARTVSLHIGTHPRDRRPSRLVWRAGQVHVYDDALTVQQIAGMAHVGPYYCGNYQGTLGERQTHELFRSANLDSFKPSELYLANLPTPLVAEERIIVAISPVRARMSALDRIRESIGDAASVFLVNDLGMDGRAPAVVIDNAGTPPPLLAVIHGSARAYSPIGLGGTVRQVGGVAVIFKLIGDAKSGSDLSTAITLLANCIRHDCRNAAEMERIGGYHIVAQLMRGMDDLLSCPEVLESVFTLVGRPTPSDRSAAVISNLSAFYHLLMDYDVWRASSIASQRAVFQHLYDLIRHSRHKGYNVKRLRKMHMVQKLLNILRDESIREEIVREIVSVLSELIDVDVLEDDLRHVGEYLLTTLNPDTLVGDTVASKRRRAVGSLAASAPRDALLALSAVVTPRKILLRNMLLDMLHGILVQSRPESRAVEKFGRVLGSKFAMSFLSRTVSTATVVGAVRLLVTLLSDARMGHMSKFKTLHGFRVLCEVLPAHSSSDQLYMLMIALALGNNASEVSFGAQFDWNGVQQFFATRVNPEQQVPLYCSDAVMVMVAMVRCVHEKAVAHATRSKDDIS* # PASA_UPDATE: g3072.t1, single gene model update, valid-1, status:[pasa:asmbl_7666,status:12], valid-1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . gene 58 1160 . + . ID=g3072;Name=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . mRNA 58 1160 . + . ID=g3072.t1;Parent=g3072;Name=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . five_prime_UTR 58 59 . + . ID=g3072.t1.utr5p1;Parent=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . exon 58 297 . + . ID=g3072.t1.exon1;Parent=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . CDS 60 297 . + 0 ID=cds.g3072.t1;Parent=g3072.t1;5_prime_partial=true NODE_4849_length_1198_cov_43.0454_potentialcontaminant . exon 522 790 . + . ID=g3072.t1.exon2;Parent=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . CDS 522 790 . + 2 ID=cds.g3072.t1;Parent=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . exon 1017 1160 . + . ID=g3072.t1.exon3;Parent=g3072.t1 NODE_4849_length_1198_cov_43.0454_potentialcontaminant . CDS 1017 1160 . + 0 ID=cds.g3072.t1;Parent=g3072.t1;3_prime_partial=true #PROT g3072.t1 g3072 EDDFFPYADCPHCYWTGYFASRMAIKGYVRWASSYLQTCRQLEVASGIFNGQSGVLAEAMGIAQHHDAVSGTEKQHVANDYARRLAVGQAACESLINDAIAKKSNSGLSLSQCPLLNVTLCDASAKAQGAFVVAAYNPLPRARTETIRFPVSTSGFAVVDASGNSVVSQVVPSEDAAAKYILTFDVQVPALGFVLYTVSPSASEDRAVFSSVAAVQV # ORIGINAL: g4846.t1 original gene structure, not modified by PASA NODE_2270_length_6959_cov_41.2501 AUGUSTUS gene 4651 6842 . - . ID=g4846;Name=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS mRNA 4651 6842 . - . ID=g4846.t1;Parent=g4846;Name=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 6522 6842 . - . ID=g4846.t1.exon1;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 6522 6842 . - 1 ID=cds.g4846.t1;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 6204 6258 . - . ID=g4846.t1.exon2;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 6204 6258 . - 1 ID=cds.g4846.t1;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 5852 5944 . - . ID=g4846.t1.exon3;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 5852 5944 . - 0 ID=cds.g4846.t1;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 5552 5626 . - . ID=g4846.t1.exon4;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 5552 5626 . - 0 ID=cds.g4846.t1;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 4651 5367 . - . ID=g4846.t1.exon5;Parent=g4846.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 4651 5367 . - 0 ID=cds.g4846.t1;Parent=g4846.t1 #PROT g4846.t1 g4846 TLRSLNVSTTLSAPQSAAWGSDVSRGSGRSGKKALQEKLKDFYAEVDVMCSLRHPNIILFLGCIEPPYLAIVAEFMSNGSVYDLVCNGRGHAIPWEKRLSMACDAAKGLTYLHQNSPVILHCDLKSANLLVDSHWTVKLADFGLTRLANAEDDGMIVGSYLWLAPECLRGAKATERSDVYSFGLVMYEIVACALPHEEFLADKHVDDLLELVVQSAYRPAIPAGTDARYQHLMTKCWSQDDSDRPSAAKVAIELDAILQNSGDGSGGQSHAGGSAMSSVNAAHPLAWGLSSAAVSAAGSPMRGWLNMEDNAAGGLKMVRRFVVVSAESFAIHETEPTTSATPDALVTPSLSSPLVIPLATIEYIAPFHRTHTSRNRACFAVGIIDGDPLCFAADGRNSMYSWVSAIEGFTNPVRRSIVP* # PASA_UPDATE: g4845.t1, single gene model update, valid-1, status:[pasa:asmbl_3907,status:12],[pasa:asmbl_3908,status:12], valid-1 NODE_2270_length_6959_cov_41.2501 . gene 1412 3632 . - . ID=g4845;Name=g4845.t1 NODE_2270_length_6959_cov_41.2501 . mRNA 1412 3632 . - . ID=g4845.t1;Parent=g4845;Name=g4845.t1 NODE_2270_length_6959_cov_41.2501 . five_prime_UTR 3553 3632 . - . ID=g4845.t1.utr5p1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . exon 3442 3632 . - . ID=g4845.t1.exon1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . CDS 3442 3552 . - 0 ID=cds.g4845.t1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . exon 3188 3272 . - . ID=g4845.t1.exon2;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . CDS 3188 3272 . - 0 ID=cds.g4845.t1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . exon 2865 3013 . - . ID=g4845.t1.exon3;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . CDS 2865 3013 . - 2 ID=cds.g4845.t1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . exon 1921 2717 . - . ID=g4845.t1.exon4;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . CDS 1921 2717 . - 0 ID=cds.g4845.t1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . exon 1412 1779 . - . ID=g4845.t1.exon5;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . CDS 1617 1779 . - 1 ID=cds.g4845.t1;Parent=g4845.t1 NODE_2270_length_6959_cov_41.2501 . three_prime_UTR 1412 1616 . - . ID=g4845.t1.utr3p1;Parent=g4845.t1 #PROT g4845.t1 g4845 MPLGSYLPARLSPDKVSLMFSVHERVGALQEILQFFKVHNLSLAHIESRPSKRASDEYDFYVEIASAVPKEKLAGVLTSLAEHATNVRALDEDSRTDNLPWFPRKISDLDQYASRILGYGSALEADHPGFHDTEYRQRREKIAEFALNYRHGNPLPRVEYTPEEVKAWGLVFNELIRLYPTHACREHNRVFPLLIDNCGYRADNIPQMEDVSRFLHDCTGFRLRPVAGLLSSRDFLNGLAFRVFHSTQYIRHHSKPLYTPEPDVCHELLGHVPLFADPAFADFSQEIGIASLGASDEDIERLATCYWFTIEFGLCRQDGQIKAYGAGLLSSFGELQYCLTEKPELRPFEPAKAAAQKYPITEYQPVYFVAESFADAKDKMRAFARQLEKPFTLRYNPYTESVEVLDNHGQINRLAHIVQSEMQTLVDALSRIEG* # ORIGINAL: g4844.t1 original gene structure, not modified by PASA NODE_2270_length_6959_cov_41.2501 AUGUSTUS gene 126 1080 . + . ID=g4844;Name=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS mRNA 126 1080 . + . ID=g4844.t1;Parent=g4844;Name=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 126 259 . + . ID=g4844.t1.exon1;Parent=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 126 259 . + 0 ID=cds.g4844.t1;Parent=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 535 634 . + . ID=g4844.t1.exon2;Parent=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 535 634 . + 1 ID=cds.g4844.t1;Parent=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS exon 892 1080 . + . ID=g4844.t1.exon3;Parent=g4844.t1 NODE_2270_length_6959_cov_41.2501 AUGUSTUS CDS 892 1080 . + 0 ID=cds.g4844.t1;Parent=g4844.t1 #PROT g4844.t1 g4844 GRTQMLNFYSVQSGVLRLVDFPGYGFRSRQEWMDLMGTYLESRKSLKLACLLIDTTHGMKDNDRFAIDQLEKAKLPYQIIMTKVDRATDKEMRHTANEITKMLLLLTTTCACLTPLPVSARKRENIDLLRTHLAKVAGVL* # ORIGINAL: g1955.t1 original gene structure, not modified by PASA NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS gene 2037 3069 . - . ID=g1955;Name=g1955.t1 NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS mRNA 2037 3069 . - . ID=g1955.t1;Parent=g1955;Name=g1955.t1 NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS exon 2739 3069 . - . ID=g1955.t1.exon1;Parent=g1955.t1 NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS CDS 2739 3069 . - 0 ID=cds.g1955.t1;Parent=g1955.t1 NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS exon 2037 2479 . - . ID=g1955.t1.exon2;Parent=g1955.t1 NODE_2008_length_8115_cov_40.8761_potentialcontaminant AUGUSTUS CDS 2037 2479 . - 2 ID=cds.g1955.t1;Parent=g1955.t1 #PROT g1955.t1 g1955 MASHEIGSALLGLLKLYAVLSLLCLASDVIGAEPAALSVASTQESATVRVSGTGKSLVLDAGEKGTIWFNSTIDGATVKALLQRIDYLENKVKSLEGKSAPPTLYSCLHFAPRPFFLAVRDDHLAGVGVAIMKSTPILFPTIFGQSQTNFFDNTTGVATVPETGVYSVAANIKTETGLEYPCICIRRAGKPLSGTVTNTDYDNALCGTYGASGESVYVGALPLTAGAIVWVCSGTSAATTFSKSTTYASSFSMQRLP* # ORIGINAL: g9738.t1 original gene structure, not modified by PASA NODE_3987_length_2394_cov_35.322 AUGUSTUS gene 478 2239 . + . ID=g9738;Name=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS mRNA 478 2239 . + . ID=g9738.t1;Parent=g9738;Name=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS exon 478 623 . + . ID=g9738.t1.exon1;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS CDS 478 623 . + 0 ID=cds.g9738.t1;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS exon 828 912 . + . ID=g9738.t1.exon2;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS CDS 828 912 . + 1 ID=cds.g9738.t1;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS exon 1289 1381 . + . ID=g9738.t1.exon3;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS CDS 1289 1381 . + 0 ID=cds.g9738.t1;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS exon 1659 1775 . + . ID=g9738.t1.exon4;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS CDS 1659 1775 . + 0 ID=cds.g9738.t1;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS exon 2105 2239 . + . ID=g9738.t1.exon5;Parent=g9738.t1 NODE_3987_length_2394_cov_35.322 AUGUSTUS CDS 2105 2239 . + 0 ID=cds.g9738.t1;Parent=g9738.t1 #PROT g9738.t1 g9738 DRDGALSPVESDSLFATSPGNPFKGDLADAAVTTDAGYITLQGFLALWSMTTLTDHRKTLEYLAYLGYSDDTKGAIKVTRSRKADMKKRKTSRSVFQCFVFGATGSGKTSFIGALVNKALRERHVSSTKVHTTVSAVNVKGAEKYLVMHEFPANGIDAEVLANKKKMEQCDIAAFVYDASDPNSFSYVARLK # ORIGINAL: g8163.t1 original gene structure, not modified by PASA NODE_3858_length_2615_cov_18.6094 AUGUSTUS gene 739 1815 . + . ID=g8163;Name=g8163.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS mRNA 739 1815 . + . ID=g8163.t1;Parent=g8163;Name=g8163.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS exon 739 1815 . + . ID=g8163.t1.exon1;Parent=g8163.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS CDS 739 1815 . + 0 ID=cds.g8163.t1;Parent=g8163.t1 #PROT g8163.t1 g8163 MALQPSSNHTTSSLLHWHRSSRHKINRKCIQTRRSTFRHHNSVHTTSSLLHWHRSSRHKINRKCIQTRRSTLRHISVHTASSLLHCHRSSRRKIISKCIQTRRSTFRQHSSNHTTSSLLHKHCSSCSKFNSKCAQLRNTTFRQSSSVHMTNLLLHCHRSSCRKIIRKHTDAPSQQRPHDQLTSTLAPQLAQDQPQMHTAVRHDVSPPQQRPHDQLTSTLTPQLPPQDQPQMHTDARHDQLTSTLPAQLPPQDEQQMQTDTQLDVSPTQQRPHDQLVNLMPGSNSVSIVGDAAVNAKDKPSIDEDVDVAPDGGLRTTTTKRKMDGRTWSALLHARKVIVRCFHRPTTPHLSLSVPIRLT* # ORIGINAL: g8164.t1 original gene structure, not modified by PASA NODE_3858_length_2615_cov_18.6094 AUGUSTUS gene 1896 2514 . + . ID=g8164;Name=g8164.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS mRNA 1896 2514 . + . ID=g8164.t1;Parent=g8164;Name=g8164.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS exon 1896 2191 . + . ID=g8164.t1.exon1;Parent=g8164.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS CDS 1896 2191 . + 0 ID=cds.g8164.t1;Parent=g8164.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS exon 2349 2514 . + . ID=g8164.t1.exon2;Parent=g8164.t1 NODE_3858_length_2615_cov_18.6094 AUGUSTUS CDS 2349 2514 . + 1 ID=cds.g8164.t1;Parent=g8164.t1 #PROT g8164.t1 g8164 MDDNNVDVNDNVDVSDDNVDMKDNVGVNDDNVGVNDDNMGVNDDNVDVKDDNVGVNEDNVGVNDDNVDVNVDIVDSNGSISACNDGNAKLTKLSATNLRKIILLARSSIPCLQMIRRKQQPDLNIICAPEDMKYDKTTCLYPGCKRNCVPLRQ* # PASA_UPDATE: g2225.t1, single gene model update, valid-1, status:[pasa:asmbl_5554,status:12], valid-1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . gene 1800 4320 . + . ID=g2225;Name=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . mRNA 1800 4320 . + . ID=g2225.t1;Parent=g2225;Name=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . exon 1800 2166 . + . ID=g2225.t1.exon1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . CDS 1800 2166 . + 0 ID=cds.g2225.t1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . exon 2530 2849 . + . ID=g2225.t1.exon2;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . CDS 2530 2849 . + 2 ID=cds.g2225.t1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . exon 3078 3414 . + . ID=g2225.t1.exon3;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . CDS 3078 3414 . + 0 ID=cds.g2225.t1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . exon 3546 3739 . + . ID=g2225.t1.exon4;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . CDS 3546 3739 . + 2 ID=cds.g2225.t1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . exon 3900 4320 . + . ID=g2225.t1.exon5;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . CDS 3900 4187 . + 0 ID=cds.g2225.t1;Parent=g2225.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant . three_prime_UTR 4188 4320 . + . ID=g2225.t1.utr3p1;Parent=g2225.t1 #PROT g2225.t1 g2225 MGKWPRTGTGGSRRVPLHHAFETRRTASGVHQNLFGGEHSDAVLSRLAEGDSNGGLRGILQRNLQSIQLTNNSSIKDKTRRKYEIAFSHFEDFLKEYFPRSRKLFNCGETEPYPPELALNYLQYLSAPKPTDAAQPPDAALYHSTDVERRGADDRLRGWMEVEPAEFTPDGEPGLGTPRFVACLGRKFSLVEVLKKELSGAMRLLSFKGEFGFDGSRPRGNPLECDSVREFMIGLKKSRAVQGEKTWHADAFEPAELLTFYDYLTASGVNRPLGDIAALRVWVVTLTCMSLFLREHEAIEGLRVETIRPFLDPATNSVRTNAFGVPDGLKITLDKGKGKTEPVEMALWRNDKDPRFCPVTTILLWLRATKLTSGPLFPAIVTEGTSEIVLENVPFSVGTFENQFRMVSLACFKTASDGSGRARFTSHSMRRTAAQWAARINAHYDVIKNSGRWSTNRVEEYIRDGRSKGEGFRAAGGDDPVCSVWYGKDGFRCAVMPKILV* # ORIGINAL: g2224.t1 original gene structure, not modified by PASA NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS gene 2 1046 . + . ID=g2224;Name=g2224.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS mRNA 2 1046 . + . ID=g2224.t1;Parent=g2224;Name=g2224.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS exon 2 62 . + . ID=g2224.t1.exon1;Parent=g2224.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS CDS 2 62 . + 1 ID=cds.g2224.t1;Parent=g2224.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS exon 477 1046 . + . ID=g2224.t1.exon2;Parent=g2224.t1 NODE_3097_length_4327_cov_51.9565_potentialcontaminant AUGUSTUS CDS 477 1046 . + 0 ID=cds.g2224.t1;Parent=g2224.t1 #PROT g2224.t1 g2224 KVDLELPEQVTLADMAAHIMARVPFAEKIPDNGDIVFESQFRSSRKVMPRKIIRLHDIESMSIMGAASAVVQQGASPEEVPARIFQMAPATTAAIFGLGRKRTEKKKEAIRIVSQLLDDSSKSANRQGILRFRRQIRAPAAENGRGVAGGRRERIASGSFCVTISDQMRNIWETERRRVRRDGGNKLDDLSDALLQGVAHLVVKYERRT* # PASA_UPDATE: g10162.t1, single gene model update, valid-1, status:[pasa:asmbl_916,status:3], valid-1 NODE_1239_length_12822_cov_40.2769 . gene 3834 6266 . - . ID=g10162;Name=g10162.t1 NODE_1239_length_12822_cov_40.2769 . mRNA 3834 6266 . - . ID=g10162.t1;Parent=g10162;Name=g10162.t1 NODE_1239_length_12822_cov_40.2769 . five_prime_UTR 6202 6266 . - . ID=g10162.t1.utr5p1;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . five_prime_UTR 5868 6051 . - . ID=g10162.t1.utr5p2;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . exon 6202 6266 . - . ID=g10162.t1.exon1;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . exon 5736 6051 . - . ID=g10162.t1.exon2;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . CDS 5736 5867 . - 0 ID=cds.g10162.t1;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . exon 5143 5556 . - . ID=g10162.t1.exon3;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . CDS 5143 5556 . - 0 ID=cds.g10162.t1;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . exon 3834 4862 . - . ID=g10162.t1.exon4;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . CDS 4416 4862 . - 0 ID=cds.g10162.t1;Parent=g10162.t1 NODE_1239_length_12822_cov_40.2769 . three_prime_UTR 3834 4415 . - . ID=g10162.t1.utr3p1;Parent=g10162.t1 #PROT g10162.t1 g10162 MAQKKEKSMFVNLVAGGGAGFMESATCHPLDTIKTRMQLARQRGSSMGPFATASRIVNNEGFFALYKGITAVVSGIVPKMAIRFSSFETYKRWLADANGQVNTGRTFLAGTMAGVTEAVLVVTPMDVLKIRLQAQRHSLADPHDIPKYRGMPHAFVTIVREEGPSALYKGVVPTVLRQASNQAVNFTAYQEIKKFWLARGDKKELAPWESLLIGGVSGGMGPLANNPIDTIKTRLQKQRIIPGQKPRYDGVTGTITTMLSEEGVLAFYKGLSPRLMRIIPGQAITFMVYEFIAKRIQPSSPVAVKDTVKEMQAAASAALQTTPNKDKLTE* # PASA_UPDATE: g10161.t1, single gene model update, valid-1, status:[pasa:asmbl_914,status:12], valid-1 NODE_1239_length_12822_cov_40.2769 . gene 1167 2122 . - . ID=g10161;Name=g10161.t1 NODE_1239_length_12822_cov_40.2769 . mRNA 1167 2122 . - . ID=g10161.t1;Parent=g10161;Name=g10161.t1 NODE_1239_length_12822_cov_40.2769 . exon 1568 2122 . - . ID=g10161.t1.exon1;Parent=g10161.t1 NODE_1239_length_12822_cov_40.2769 . CDS 1568 2122 . - 0 ID=cds.g10161.t1;Parent=g10161.t1 NODE_1239_length_12822_cov_40.2769 . exon 1167 1446 . - . ID=g10161.t1.exon2;Parent=g10161.t1 NODE_1239_length_12822_cov_40.2769 . CDS 1177 1446 . - 0 ID=cds.g10161.t1;Parent=g10161.t1 NODE_1239_length_12822_cov_40.2769 . three_prime_UTR 1167 1176 . - . ID=g10161.t1.utr3p1;Parent=g10161.t1 #PROT g10161.t1 g10161 MVNLATTVSTIARRVPAISSAVLRHGSITAGKYASPTVGLVPSARAIESCGIRIFSTSRALPSARSAYPLAYYPDLTSQKSLRPAREVAVCDDASRIPSSLVSAELQSSHVRHATLADADTIYSMLEHHFKTGAILPISMEFIRKDISNYFVYIMDGEIVGSAYLKDYGPTTAELAKIVTSPKHQGKGIAGRVIVSMLATAKAEGRKSVFALTLDAAMSRCFEKHGFANVARETLCDKWRQSYDFRRPTRAFFRSLESQDASQESETEARVTYA* # ORIGINAL: g10163.t1 original gene structure, not modified by PASA # ORIGINAL: g10163.t2 original gene structure, not modified by PASA NODE_1239_length_12822_cov_40.2769 AUGUSTUS gene 7047 12647 . + . ID=g10163;Name=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS mRNA 7047 8124 . + . ID=g10163.t1;Parent=g10163;Name=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7047 7118 . + . ID=g10163.t1.exon1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7047 7118 . + 0 ID=cds.g10163.t1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7306 7412 . + . ID=g10163.t1.exon2;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7306 7412 . + 0 ID=cds.g10163.t1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7532 7655 . + . ID=g10163.t1.exon3;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7532 7655 . + 1 ID=cds.g10163.t1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7895 7919 . + . ID=g10163.t1.exon4;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7895 7919 . + 0 ID=cds.g10163.t1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 8081 8124 . + . ID=g10163.t1.exon5;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 8081 8124 . + 2 ID=cds.g10163.t1;Parent=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS mRNA 7047 12647 . + . ID=g10163.t2;Parent=g10163;Name=g10163.t1 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7047 7118 . + . ID=g10163.t2.exon1;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7047 7118 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7306 7412 . + . ID=g10163.t2.exon2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7306 7412 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7532 7655 . + . ID=g10163.t2.exon3;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7532 7655 . + 1 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 7895 7919 . + . ID=g10163.t2.exon4;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 7895 7919 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 8081 8094 . + . ID=g10163.t2.exon5;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 8081 8094 . + 2 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 8334 8354 . + . ID=g10163.t2.exon6;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 8334 8354 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 8750 8850 . + . ID=g10163.t2.exon7;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 8750 8850 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 9132 9265 . + . ID=g10163.t2.exon8;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 9132 9265 . + 1 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 9523 9698 . + . ID=g10163.t2.exon9;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 9523 9698 . + 2 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 9812 10027 . + . ID=g10163.t2.exon10;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 9812 10027 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 10222 10387 . + . ID=g10163.t2.exon11;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 10222 10387 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 10524 10589 . + . ID=g10163.t2.exon12;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 10524 10589 . + 2 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 10813 10868 . + . ID=g10163.t2.exon13;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 10813 10868 . + 2 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 11107 11223 . + . ID=g10163.t2.exon14;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 11107 11223 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 11481 11615 . + . ID=g10163.t2.exon15;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 11481 11615 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 11773 11940 . + . ID=g10163.t2.exon16;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 11773 11940 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 12123 12242 . + . ID=g10163.t2.exon17;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 12123 12242 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS exon 12510 12647 . + . ID=g10163.t2.exon18;Parent=g10163.t2 NODE_1239_length_12822_cov_40.2769 AUGUSTUS CDS 12510 12647 . + 0 ID=cds.g10163.t2;Parent=g10163.t2 #PROT g10163.t1 g10163 MADAGFFDTYSASVGVEDLVLLSKVSEEDIMQNIKKRFDADRIYTYIGHVLIAMNPYKRMKIYTDDFIKAYCGKFRVEMPPHIYAIAEETVRTMISEEENQCVIISGESGAGKTVGFHAHLVS* #PROT g10163.t2 g10163 MADAGFFDTYSASVGVEDLVLLSKVSEEDIMQNIKKRFDADRIYTYIGHVLIAMNPYKRMKIYTDDFIKAYCGKFRVEMPPHIYAIAEETVRTMISEEENQCVIISGESGAGKTESAKLIMSYIAAVSAQGQGVERIKSVVLESNPLLEAFGNAKTLRNNNSSRFGKYVDIRFDHYGKPRGGNIRNYLLEKSRVPSQMKGERNFHIFYQLCRGAPDSAKKALKLKAPEQFAYMAKSQCTTVDGMDDAEEFAATMHAMKTIGLGSKGQEAVMRTLAGILHLGDGKFEDDGKQGSQVKSGDSFKFGAELLGLDAATLEKVICFRHLVTRGEEYDVPQNPAQAAGSRDSLAKTIYFRLFDWLVGCVNSALAVREEGESTDGDDETLSIGVLDIYGFEIFDNNGFEQFLINFVNEKLQQIFIELTLKAEQEEYVREGITWTPINFFNNKIVCDLVESKKPSGIMAILDDVCATLHAQSSGADQKFLQKLSEFHSSHEHFGSSNRGFVIKHYAGRVEYNVDGFCESNKDTLFQDVLIALKGSSNKLITALFPDEITTDQKKRPTTVSFKMKNQCDALVIALMECNPHYVRCIKPNDNKKPLEIDQKRVIHQIKYLGLLENVRVRRAGFAYRQEFHRFNDRWGAVATSEHSCGYWIV* # PASA_UPDATE: g11566.t1, single gene model update, valid-1, status:[pasa:asmbl_2414,status:3], valid-1 NODE_1713_length_9558_cov_53.1985 . gene 2659 5477 . - . ID=g11566;Name=g11566.t1 NODE_1713_length_9558_cov_53.1985 . mRNA 2659 5477 . - . ID=g11566.t1;Parent=g11566;Name=g11566.t1 NODE_1713_length_9558_cov_53.1985 . five_prime_UTR 5182 5477 . - . ID=g11566.t1.utr5p1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . exon 5118 5477 . - . ID=g11566.t1.exon1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . CDS 5118 5181 . - 0 ID=cds.g11566.t1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . exon 4722 4875 . - . ID=g11566.t1.exon2;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . CDS 4722 4875 . - 2 ID=cds.g11566.t1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . exon 4194 4454 . - . ID=g11566.t1.exon3;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . CDS 4194 4454 . - 1 ID=cds.g11566.t1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . exon 2659 3747 . - . ID=g11566.t1.exon4;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . CDS 2931 3747 . - 1 ID=cds.g11566.t1;Parent=g11566.t1 NODE_1713_length_9558_cov_53.1985 . three_prime_UTR 2659 2930 . - . ID=g11566.t1.utr3p1;Parent=g11566.t1 #PROT g11566.t1 g11566 MSKQRVCYFYDPEVGNFHYGPGHPMKPHRLSLTHNLVLNYGLYRKMELYRPYRATEYDMTRFHSADYIDFLKRVTPDNMDQFAKQLGRFNVGDDCPVFDGIYDFCSIYTGGSLEGAVRLNNNTSDIAINWPGGLHHAKKFEASGFCYVNDINVAILELLRYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSLHKYGNHFFPGTGDIGELGAKEGRYYSLNVPLKDGIDDFSYQQLFRPIIQAVMDNYRPTAVVLQCGADSLGCDRLGCFNLSIKGHGDCVQFVKSFGLPTLVVGGGGYTIRNVARCWTYETSLLVDTEIGNELPFNDYFEYYGPDFTLHPDTSTRIDNMNTAQYLNNVRQSVMENLRMLQGAPSVQMQEIPPPLMDLESRAEHEPNPDLRMSLRARDAHIEPDNEYYDGDRDNDGDELDV* # PASA_UPDATE: g11567.t1, single gene model update, valid-1, status:[pasa:asmbl_2415,status:12],[pasa:asmbl_2416,status:12], valid-1 NODE_1713_length_9558_cov_53.1985 . gene 5922 9055 . + . ID=g11567;Name=g11567.t1 NODE_1713_length_9558_cov_53.1985 . mRNA 5922 9055 . + . ID=g11567.t1;Parent=g11567;Name=g11567.t1 NODE_1713_length_9558_cov_53.1985 . exon 5922 6048 . + . ID=g11567.t1.exon1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . CDS 5922 6048 . + 0 ID=cds.g11567.t1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . exon 6256 6317 . + . ID=g11567.t1.exon2;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . CDS 6256 6317 . + 2 ID=cds.g11567.t1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . exon 6719 6943 . + . ID=g11567.t1.exon3;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . CDS 6719 6943 . + 0 ID=cds.g11567.t1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . exon 7426 7902 . + . ID=g11567.t1.exon4;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . CDS 7426 7902 . + 0 ID=cds.g11567.t1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . exon 8157 9055 . + . ID=g11567.t1.exon5;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . CDS 8157 8693 . + 0 ID=cds.g11567.t1;Parent=g11567.t1 NODE_1713_length_9558_cov_53.1985 . three_prime_UTR 8694 9055 . + . ID=g11567.t1.utr3p1;Parent=g11567.t1 #PROT g11567.t1 g11567 MASSTVGAEAGPSTDAVIRPSVLVLGANGFVGSHVIDVLLQQGVMEVRGLVRDDQSADAGFLKSAGARLHVGDLMKLPSLERAMIRVHTVINCAGHYSWTRGSDPQVFHRVNFEGCRNAIEAASRCKVVRFLHVSTLLIFGDTQWGRSPLDPIVDPLATPIGSHSSEYARTMHLGVKVALEYHRRKLNALFGETPGSSALRTDVSPRRSSVSPVGGETVTTGAGAPGDAARRRHPSATYGSIDYDNGRRGSAAGKGGEGVEGTLGGSLWRGVYRSLFGEEGDAGGILSNDMPMTESKTMSIDVILLPFCIGRDQKLMSQDPSRDVLRLKSIVKNESVTSPMGSENTSFTYIHVKDAARAIANASVRKSDGGHVFMVGGHRLSPSAFYAVVQSVSGTPRPKLDVPPWLAVASAVTWEALRKATGMGAPASVPVDLLRTYAAGGVFYDSAKTDGDLGVGAPFLPIEAAFEEAMRCVK* # PASA_UPDATE: g13994.t1, single gene model update, valid-1, status:[pasa:asmbl_2120,status:12],[pasa:asmbl_2121,status:12], valid-1 NODE_1604_length_10229_cov_39.6604 . gene 3438 5363 . - . ID=g13994;Name=g13994.t1 NODE_1604_length_10229_cov_39.6604 . mRNA 3438 5363 . - . ID=g13994.t1;Parent=g13994;Name=g13994.t1 NODE_1604_length_10229_cov_39.6604 . five_prime_UTR 5320 5363 . - . ID=g13994.t1.utr5p1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . exon 5241 5363 . - . ID=g13994.t1.exon1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . CDS 5241 5319 . - 0 ID=cds.g13994.t1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . exon 4977 5035 . - . ID=g13994.t1.exon2;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . CDS 4977 5035 . - 2 ID=cds.g13994.t1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . exon 4605 4715 . - . ID=g13994.t1.exon3;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . CDS 4605 4715 . - 0 ID=cds.g13994.t1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . exon 4289 4477 . - . ID=g13994.t1.exon4;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . CDS 4289 4477 . - 0 ID=cds.g13994.t1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . exon 3438 3814 . - . ID=g13994.t1.exon5;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . CDS 3455 3814 . - 0 ID=cds.g13994.t1;Parent=g13994.t1 NODE_1604_length_10229_cov_39.6604 . three_prime_UTR 3438 3454 . - . ID=g13994.t1.utr3p1;Parent=g13994.t1 #PROT g13994.t1 g13994 MFYDLNIPLDAKDGRQLAALRAAIKRLKFDCIAYSNLIVGKLSNAHINPYGDIVKAGCLEKLPFRELTRITVLVEDAGQNYGLSAANSAIHTYDIVAVQPTSEKMFQFCCHTADCDIITFDLAKRIPFFVKGPPVGVAMERGIHFEITYSAAIRDATARRNLISNALNLVRVTKGRNVVLSSEAANALELRGPYDVANLALMFGIDKGTAKACVSDNARAVLLHARARKGARGVIEITAIDQPVGAASVAPPNTDGDDENDEMET* # PASA_UPDATE: g13996.t1, single gene model update, valid-1, status:[pasa:asmbl_2122,status:12], valid-1 NODE_1604_length_10229_cov_39.6604 . gene 8621 10118 . + . ID=g13996;Name=g13996.t1 NODE_1604_length_10229_cov_39.6604 . mRNA 8621 10118 . + . ID=g13996.t1;Parent=g13996;Name=g13996.t1 NODE_1604_length_10229_cov_39.6604 . five_prime_UTR 8621 8664 . + . ID=g13996.t1.utr5p1;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . five_prime_UTR 8787 8930 . + . ID=g13996.t1.utr5p2;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . exon 8621 8664 . + . ID=g13996.t1.exon1;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . exon 8787 9333 . + . ID=g13996.t1.exon2;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . CDS 8931 9333 . + 0 ID=cds.g13996.t1;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . exon 9450 9570 . + . ID=g13996.t1.exon3;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . CDS 9450 9570 . + 2 ID=cds.g13996.t1;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . exon 9830 10118 . + . ID=g13996.t1.exon4;Parent=g13996.t1 NODE_1604_length_10229_cov_39.6604 . CDS 9830 10118 . + 1 ID=cds.g13996.t1;Parent=g13996.t1 #PROT g13996.t1 g13996 MTSQGMPVQGRLRSLTCPSRLAQSPGTLNGTLGAGVKVDQVDQVDRVDVGGLGDVDGDDGGVPDTHVPTLRLPVVGDGSDDDDRGVCGNIPRHNVFEENDGRNRHSGSTLRPAAISPAGRLSTAAGRVLASPLFDALRKGRGDIKRMFTHEDRLPLPTLVAIRSPAGHVLTALERSPRSANERDCLGWTPLHHACYHGDPQLTSALVHAGGDVDARTPDDENTPLHWACANGHLNCVAILIEAECSIEPLNARGLRPVDVTLNKDIKVRA* # ORIGINAL: g13995.t1 original gene structure, not modified by PASA NODE_1604_length_10229_cov_39.6604 AUGUSTUS gene 5726 7441 . - . ID=g13995;Name=g13995.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS mRNA 5726 7441 . - . ID=g13995.t1;Parent=g13995;Name=g13995.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 5726 7441 . - . ID=g13995.t1.exon1;Parent=g13995.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 5726 7441 . - 0 ID=cds.g13995.t1;Parent=g13995.t1 #PROT g13995.t1 g13995 MRWIRCAVTATYAVVLGITIYLLLHLSLQTDAFGWLEPLTLTRLDGLKLGNPLYVDPRGNSRRHKFEQSPSKRVTADGDEPQRRRASSHCAYGNLSFLVIGDWGQGDANQRAVARTLASHARSRKASFAVSTGDNIYPFGVSESTRDEALARVFADVYGEHEALRGMDWYATLGNHDCMGDPLAQLERPTQSDSGPNKEQLHPRWKMPSRYYAFSSPSGSAWEVRANVGLRERDHAVPRGDIDAVSEGRPRGFSSDGTSEWTEFFDDAIVDSRARTSGTSSPPIAAFVALDCCELVCGLESGAEATHCGQIRTNYDVFTGCTTLAECAKRQLEWADATLAAVPMSTPWRFVVGHWPIVSAVMYKGVPALRQKLMPVLERRDVLAYFSGHAHALQHIEPVDSCPLTPAEPRMEERGAAEEQNGEPVSRRDINSNGNAGDLDSGSPRKPFSSSHATDQEDLMGQAMGQVNRDTGMHADYDLDHEHGDVVNGCKRRQRPHHFVSGGGGGYLLQAARTLHVRPGYKNVFVAQSFGFLAVDLRGRVATFEFVDGISGKVLHSYSYVAEEDACGMMH* # ORIGINAL: g13993.t1 original gene structure, not modified by PASA NODE_1604_length_10229_cov_39.6604 AUGUSTUS gene 337 3135 . + . ID=g13993;Name=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS mRNA 337 3135 . + . ID=g13993.t1;Parent=g13993;Name=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 337 417 . + . ID=g13993.t1.exon1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 337 417 . + 2 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 833 934 . + . ID=g13993.t1.exon2;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 833 934 . + 2 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 1256 1357 . + . ID=g13993.t1.exon3;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 1256 1357 . + 2 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 1725 1849 . + . ID=g13993.t1.exon4;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 1725 1849 . + 2 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 2133 2226 . + . ID=g13993.t1.exon5;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 2133 2226 . + 0 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 2463 2746 . + . ID=g13993.t1.exon6;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 2463 2746 . + 2 ID=cds.g13993.t1;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS exon 3034 3135 . + . ID=g13993.t1.exon7;Parent=g13993.t1 NODE_1604_length_10229_cov_39.6604 AUGUSTUS CDS 3034 3135 . + 0 ID=cds.g13993.t1;Parent=g13993.t1 #PROT g13993.t1 g13993 GSVLIFVTKKANCQLLADNLKKANQNVFALHGDVQQNERNRVISSFKRREFPILIATDVAARGLDISHIRTVVNFDVARDIDTHTHRVGRTGRAGEKGSAYTLITSKESSFAGDLVRNLEGANQRVPPELLSIAMQNGRFRSEREGGGRGRGRGGRGGGGRGGGRGRGRGGMNRDDRGASDYGHQSGHVRPGVGLSDGGSHQGHEHNRGHNNANSNSSPRQYPPPQRGAGAGGRGMGMAGFVAASSAQPSAADFAHIAQIAPPQHRQQQQQHQHQHQPQQQTAPSQQPQRKSRWE* # ORIGINAL: g2943.t1 original gene structure, not modified by PASA NODE_7815_length_405_cov_59.4303_potentialcontaminant AUGUSTUS gene 2 405 . + . ID=g2943;Name=g2943.t1 NODE_7815_length_405_cov_59.4303_potentialcontaminant AUGUSTUS mRNA 2 405 . + . ID=g2943.t1;Parent=g2943;Name=g2943.t1 NODE_7815_length_405_cov_59.4303_potentialcontaminant AUGUSTUS exon 2 405 . + . ID=g2943.t1.exon1;Parent=g2943.t1 NODE_7815_length_405_cov_59.4303_potentialcontaminant AUGUSTUS CDS 2 405 . + 0 ID=cds.g2943.t1;Parent=g2943.t1 #PROT g2943.t1 g2943 PPWCAADTRMANKEEVGRKGGTLLQQARQLSLRQPSFFARVFGINSADRILELYKNAGFFFKLDHLYGEAAGVYMEAAEYIAADNMLEAKMLFSNALVCLRKTTVPTNIAHCLQRLSEISIILGYFDQAARYEE # PASA_UPDATE: g719.t1, single gene model update, valid-1, status:[pasa:asmbl_6750,status:12], valid-1 NODE_3940_length_2486_cov_40.0108 . gene 2 554 . + . ID=g719;Name=g719.t1 NODE_3940_length_2486_cov_40.0108 . mRNA 2 554 . + . ID=g719.t1;Parent=g719;Name=g719.t1 NODE_3940_length_2486_cov_40.0108 . exon 2 554 . + . ID=g719.t1.exon1;Parent=g719.t1 NODE_3940_length_2486_cov_40.0108 . CDS 2 484 . + 0 ID=cds.g719.t1;Parent=g719.t1;5_prime_partial=true NODE_3940_length_2486_cov_40.0108 . three_prime_UTR 485 554 . + . ID=g719.t1.utr3p1;Parent=g719.t1 #PROT g719.t1 g719 AAVRASATSVASALNYAASVRSVASASATSAAVRASATSVASALNYAASVKSVASISATSAAVRASATSVASALNYAASVRSVASARATSAAAVSSSLARVSASVRSAASVATSIAAAKASASASSAAAKSAISVASAASVRGLATSTRKSTSTPVPKLK* # ORIGINAL: g720.t1 original gene structure, not modified by PASA NODE_3940_length_2486_cov_40.0108 AUGUSTUS gene 1331 2394 . + . ID=g720;Name=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS mRNA 1331 2394 . + . ID=g720.t1;Parent=g720;Name=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS exon 1331 1739 . + . ID=g720.t1.exon1;Parent=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS CDS 1331 1739 . + 0 ID=cds.g720.t1;Parent=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS exon 1896 1985 . + . ID=g720.t1.exon2;Parent=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS CDS 1896 1985 . + 2 ID=cds.g720.t1;Parent=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS exon 2213 2394 . + . ID=g720.t1.exon3;Parent=g720.t1 NODE_3940_length_2486_cov_40.0108 AUGUSTUS CDS 2213 2394 . + 2 ID=cds.g720.t1;Parent=g720.t1 #PROT g720.t1 g720 MFRRTNGSSHGAGVLADELRDALHMSDDDMGHDPSSGRHAFNGTEHQQQQQYHPYRDASGLSPSESMAYAVVGFGTASATTRDTPKSIERRNLLCVLQHAVRYLLDGSVGRVVDDADENLARFSTILEAVLDHGIRSGKKKWMGADKAGYYGFFEPVLKQLRSPITESVREMNDVKTARGKGRAFIRHALMEKRLAQYVQKAIGEFQLVRYVLHSVFWKEFEAGAV* # ORIGINAL: g6798.t1 original gene structure, not modified by PASA NODE_1644_length_10028_cov_39.5549 AUGUSTUS gene 6423 9566 . + . ID=g6798;Name=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS mRNA 6423 9566 . + . ID=g6798.t1;Parent=g6798;Name=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 6423 6498 . + . ID=g6798.t1.exon1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 6423 6498 . + 0 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 6814 6939 . + . ID=g6798.t1.exon2;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 6814 6939 . + 2 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 7154 7236 . + . ID=g6798.t1.exon3;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 7154 7236 . + 2 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 7539 7592 . + . ID=g6798.t1.exon4;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 7539 7592 . + 0 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 7996 8057 . + . ID=g6798.t1.exon5;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 7996 8057 . + 0 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 8390 8419 . + . ID=g6798.t1.exon6;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 8390 8419 . + 1 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 8574 8783 . + . ID=g6798.t1.exon7;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 8574 8783 . + 1 ID=cds.g6798.t1;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 9074 9566 . + . ID=g6798.t1.exon8;Parent=g6798.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 9074 9566 . + 1 ID=cds.g6798.t1;Parent=g6798.t1 #PROT g6798.t1 g6798 MTDGSADDAERTERRIERAKRKARSELKSMSDWTTCGYAYSDSWLDRVRDAAIRIDYDEVTREAFVAQYESKGVPVVITGNVTSTWAAHTNWTMPELLRRYGREKFKIGQDDEGYPVKVRLAHFAHYAYSQRQRDDSPLYIFDSTFGDNEGKRSLLGDFSIPKYFEEDLFSHAGHKRRPPYRWFVAGPRRSGTGIHIDPLGTSAWNALIFGHKRWALFPPGTPKELVCPKLPDDEGITWFDRVFPRTQRPDWPTHRPLEILQRPGDVVFVPGGWWHVVVNLDNTVAVTQNFCSSTNFRYVWRRTRKGRPKMSRRWLSALARARPDLAQLARAIDAGKVPLDVLDVADPESTSSSSSSSTYSSTSDEESARDVSMGGR* # ORIGINAL: g6796.t1 original gene structure, not modified by PASA NODE_1644_length_10028_cov_39.5549 AUGUSTUS gene 2050 2674 . + . ID=g6796;Name=g6796.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS mRNA 2050 2674 . + . ID=g6796.t1;Parent=g6796;Name=g6796.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 2050 2436 . + . ID=g6796.t1.exon1;Parent=g6796.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 2050 2436 . + 0 ID=cds.g6796.t1;Parent=g6796.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 2585 2674 . + . ID=g6796.t1.exon2;Parent=g6796.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 2585 2674 . + 0 ID=cds.g6796.t1;Parent=g6796.t1 #PROT g6796.t1 g6796 MQEAAPRDDVNGFANPQELPTLFVVNRYYMNSGCNGIMEVEIFTNYEDALSSYRKNRTEVMSICSARPNDNETRAAMMLTDEEALAVWKSAYPGDNGGQYVVCSRETDPRTRSDNLECRQEGAWKRPEGKRSEWVPEIKPTTSAGRQYWHRRSSPECV* # ORIGINAL: g6795.t1 original gene structure, not modified by PASA NODE_1644_length_10028_cov_39.5549 AUGUSTUS gene 2 531 . + . ID=g6795;Name=g6795.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS mRNA 2 531 . + . ID=g6795.t1;Parent=g6795;Name=g6795.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 2 531 . + . ID=g6795.t1.exon1;Parent=g6795.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 2 531 . + 2 ID=cds.g6795.t1;Parent=g6795.t1 #PROT g6795.t1 g6795 TTVVRVWGATALRLLDARALPLNAVTMAESLLKQTDALAATLSHGNEEDDAYTDAVDVLRMAVVGLKNAANAFHQRLAVVAADENASATELRRMNDRLAWVERALIAPEGLPGRPWYRHLVNAPSALNSYSGSGFPGAVDAHSQGGADQTRRALARVTAAIVAAARSLDIPDPVA* # ORIGINAL: g6797.t1 original gene structure, not modified by PASA NODE_1644_length_10028_cov_39.5549 AUGUSTUS gene 3884 5976 . - . ID=g6797;Name=g6797.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS mRNA 3884 5976 . - . ID=g6797.t1;Parent=g6797;Name=g6797.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 4655 5976 . - . ID=g6797.t1.exon1;Parent=g6797.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 4655 5976 . - 0 ID=cds.g6797.t1;Parent=g6797.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS exon 3884 4463 . - . ID=g6797.t1.exon2;Parent=g6797.t1 NODE_1644_length_10028_cov_39.5549 AUGUSTUS CDS 3884 4463 . - 1 ID=cds.g6797.t1;Parent=g6797.t1 #PROT g6797.t1 g6797 MTKTLSQDRGFLPRVTLAVCLFVVIATLATAVFRLRNPIYLPDIHTVWHVTNSGANNSHSGQIATTSSLIHICLAFDANYFVGAFAFVNSTVHHCSRPHDLVFHFVTPQNDSDANLRRIFHTQFPDVAFDFQSLNADLVPTAKVWAAYRSSSLSKPIVYTRFILPDMFPHLDRLLFMDLDILVTADIAPLYDIGMDGHPLAAVRLCRKSAMFMHQFQIQEPELSDINPLECSLNGGVLLMALDRWRRTNFTAQLFEWTRRNNKKKLYNLGSQPPLNLVFRGNYKLLDRSWNLLDIAGLHDPNGDLMTVPSADVLRGGIFHWNGQFKPWMCAEGFFSEVWRRYFPAFRDHLGALFDADRSICDSVVITDLDLSVNDDRASFTAVISSRVLSDALVAVVQHLRHSDYVDEVVVVWANSTHPCPRDLVALARCLPQADDYGHNRFRIWREISTEGALHLDANTIIPLHELEAAFKIWRQHSDRMLGFETSVVRCLESNNGTNHTNSCVLEEGHFDLVVGSAFFVANRYLEMFDRPQIIALTTRLPCEDIALNYVVGAHSGQAPLWFKLAATELQPSIHRGVRHFAGAVNGSDTAGRERECVTHMKSLFGRHPVHPQNTRYAFTTDRSRVLKLPIGR* # ORIGINAL: g7768.t1 original gene structure, not modified by PASA NODE_917_length_15899_cov_44.4381 AUGUSTUS gene 11353 14098 . - . ID=g7768;Name=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS mRNA 11353 14098 . - . ID=g7768.t1;Parent=g7768;Name=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 13958 14098 . - . ID=g7768.t1.exon1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 13958 14098 . - 0 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 12976 13806 . - . ID=g7768.t1.exon2;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 12976 13806 . - 0 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 12629 12839 . - . ID=g7768.t1.exon3;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 12629 12839 . - 0 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 12336 12474 . - . ID=g7768.t1.exon4;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 12336 12474 . - 2 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 11965 12106 . - . ID=g7768.t1.exon5;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 11965 12106 . - 1 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 11548 11724 . - . ID=g7768.t1.exon6;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 11548 11724 . - 0 ID=cds.g7768.t1;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 11353 11424 . - . ID=g7768.t1.exon7;Parent=g7768.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 11353 11424 . - 0 ID=cds.g7768.t1;Parent=g7768.t1 #PROT g7768.t1 g7768 MSNGEASSPPSDRLLTVPSVFVDAAVAVITKAFENDEVYWKLKQAAKEEICKAKYLDADVGDAVVDLLRESGLDSRIRNMVYTSAVGLVHPAFAFAPAPHALLPERLGLPIFAAEFERLPYIADAQKKWETRIGKRVVALAQDLALPLARTRTPEAARICTERYAAGDYMKMGEGSAGAGRAIGHLYDHSDFLETLRGLRNPNHAPLALGTDIFGTVGATIGSGQHPSTALASWTSIVVHMSTPGIAELQERYRELSTDLRQVGLDDVDGRDKGWFSAERLACGQKIVNSGDIAQTRQLAKRGLPSPLRPRAWATILGIDLTKSDRALFDQLMADVIKHDLLTDRLWLLDVRLLPGNDDNYFPFEDSIAATALAFSRDAWVGERCRARPNAPVVGKAHQHVVYPPNGIFPFKGLSMTIAPLCFVYADLPIVYQAYRQLHLRYFRWLHTINSSPRGILFLSVLFENLLQTHQPHLLFHLRQLDVDPLKYAFPWLMQGYAGYLDTDQHLILWDRILAYDATELLAIVAVAVFTFRRQALMQSNSAAAVELILLDLRALKVIPLLQCCLFASS* # ORIGINAL: g7766.t1 original gene structure, not modified by PASA NODE_917_length_15899_cov_44.4381 AUGUSTUS gene 6947 10308 . - . ID=g7766;Name=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS mRNA 6947 10308 . - . ID=g7766.t1;Parent=g7766;Name=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 10072 10308 . - . ID=g7766.t1.exon1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 10072 10308 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 9609 9926 . - . ID=g7766.t1.exon2;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 9609 9926 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 9038 9286 . - . ID=g7766.t1.exon3;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 9038 9286 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 8504 8749 . - . ID=g7766.t1.exon4;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 8504 8749 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 8147 8303 . - . ID=g7766.t1.exon5;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 8147 8303 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 7746 7957 . - . ID=g7766.t1.exon6;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 7746 7957 . - 2 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 7222 7356 . - . ID=g7766.t1.exon7;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 7222 7356 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 6947 7054 . - . ID=g7766.t1.exon8;Parent=g7766.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 6947 7054 . - 0 ID=cds.g7766.t1;Parent=g7766.t1 #PROT g7766.t1 g7766 MSRGDSRLRLLQSNDLLSTPTSESPSQSPEPDELNRDRIAGRHSDGRESAGYDVAAFSNVSDFGNLSTASGRASEQDRKGMEEYGGSSDAADTPSHGTNTDHTYSRDALDRPSAPASATYMESPATKRMQHNASRHRSVLSLRAMDDEDPTVPDVTAQNVVEKISKFRTGERKHVYDPVLDSEVEAQQGLRDDGDARTRRAPPGDDRTESILHAKKYTILTDGRAFHEFADLSELMGDRGMQVIRNTHGTFWLDVFQPDAADMEFMEQVFGMHPLTVEDILTDGTREKMEIYERYIFFNVQSLASSESTYDIGNMVESMFIAVYVNFVLTFHVRPSQRMPRVVRRVRAAKTLRPDWVMYTLLDEIVDSCVPLVEIAEAEVESINDLVLLLSGSEQSDTLRRIGNARKRLSDLHRRLHPKREMLAAMTTRAHKCLSPSTQLYLRDVLDHVLGMLMQIEMSRETLNTSQSNYLAKVSIELANYSNDMSKVMKTLTIAATILMPLTLISGVFGMNVYVPGQIEENSDSLGPFFGVVGSMAGIAATLLFLFLRAGYI* # ORIGINAL: g7769.t1 original gene structure, not modified by PASA NODE_917_length_15899_cov_44.4381 AUGUSTUS gene 14548 15182 . + . ID=g7769;Name=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS mRNA 14548 15182 . + . ID=g7769.t1;Parent=g7769;Name=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 14548 14625 . + . ID=g7769.t1.exon1;Parent=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 14548 14625 . + 0 ID=cds.g7769.t1;Parent=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 14869 15063 . + . ID=g7769.t1.exon2;Parent=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 14869 15063 . + 0 ID=cds.g7769.t1;Parent=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 15171 15182 . + . ID=g7769.t1.exon3;Parent=g7769.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 15171 15182 . + 0 ID=cds.g7769.t1;Parent=g7769.t1 #PROT g7769.t1 g7769 MAESRAKDEDLDRIVLGYLQKKGYKQAEESFRKDAKVQHLDEMVFNNSVDSETSVSDLVGLYNDEELFPDKVADSYSALRDWVSQSLDMYKDSG* # ORIGINAL: g7764.t1 original gene structure, not modified by PASA NODE_917_length_15899_cov_44.4381 AUGUSTUS gene 1 994 . - . ID=g7764;Name=g7764.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS mRNA 1 994 . - . ID=g7764.t1;Parent=g7764;Name=g7764.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 1 994 . - . ID=g7764.t1.exon1;Parent=g7764.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 1 994 . - 0 ID=cds.g7764.t1;Parent=g7764.t1 #PROT g7764.t1 g7764 MKRAYDVWHWFKKRAALNLYDLIVFHDMRGLGLYVMYAKAAGLGFAKTALMVHAHGSSKLSDYFNARLPGEGDTGLVQYAMERKSVELADYVLSPSEYYYSWMLSNGYGLQEAAAAGTKLWTMSLLVPIEKWSVFNRAPRYGQLVRSSKFAFFGRIDRLKGLFTLLDALDELARTRDEQPMEVLFVGDSTTMYVDGQSVDAIVYIRKRHRASSWPFLIKFSGSLTSEDVAELFVKDNYIFINPTNGETASTVTVELLNAGVAMITTNVCALPELFGEAGYREWQFDRGDVPALVELMRKAMRDGVPVLRPRMRADESRNLYIDAAAVAIAL # PASA_UPDATE: g7767.t1, single gene model update, valid-1, status:[pasa:asmbl_9986,status:12], valid-1 NODE_917_length_15899_cov_44.4381 . gene 10683 11525 . + . ID=g7767;Name=g7767.t1 NODE_917_length_15899_cov_44.4381 . mRNA 10683 11525 . + . ID=g7767.t1;Parent=g7767;Name=g7767.t1 NODE_917_length_15899_cov_44.4381 . five_prime_UTR 10683 10754 . + . ID=g7767.t1.utr5p1;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . exon 10683 10787 . + . ID=g7767.t1.exon1;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . CDS 10755 10787 . + 0 ID=cds.g7767.t1;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . exon 10946 11029 . + . ID=g7767.t1.exon2;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . CDS 10946 11029 . + 0 ID=cds.g7767.t1;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . exon 11156 11525 . + . ID=g7767.t1.exon3;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . CDS 11156 11242 . + 0 ID=cds.g7767.t1;Parent=g7767.t1 NODE_917_length_15899_cov_44.4381 . three_prime_UTR 11243 11525 . + . ID=g7767.t1.utr3p1;Parent=g7767.t1 #PROT g7767.t1 g7767 MHPQGKPALEKEEEDLYTRRIEQTGCAHLNEAVLECYNKHKDWRLCQDEVKAFKACFLRHQSEKKST* # ORIGINAL: g7765.t1 original gene structure, not modified by PASA NODE_917_length_15899_cov_44.4381 AUGUSTUS gene 2126 6037 . - . ID=g7765;Name=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS mRNA 2126 6037 . - . ID=g7765.t1;Parent=g7765;Name=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 4538 6037 . - . ID=g7765.t1.exon1;Parent=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 4538 6037 . - 0 ID=cds.g7765.t1;Parent=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 3031 4356 . - . ID=g7765.t1.exon2;Parent=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 3031 4356 . - 0 ID=cds.g7765.t1;Parent=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS exon 2126 2908 . - . ID=g7765.t1.exon3;Parent=g7765.t1 NODE_917_length_15899_cov_44.4381 AUGUSTUS CDS 2126 2908 . - 0 ID=cds.g7765.t1;Parent=g7765.t1 #PROT g7765.t1 g7765 MRSVFNEPETAASGGLFGRVMRARNRISGLHRRKLPVFLGVLIVCAWTAHFVSVGKFASSIRPVPSESGKLANAVPENTIRSPALLRRDLTPLEELDVKIFVYPLPQEYNDALLDASRQTNSRQICVCCTVFYGSEVAFHKTLLESPYVTKDPSEADFFYVPAYVSCLIKNGARIEGVNMPDLRQTSAFLERALNYIRSNYPYWDWRGGEDHIWAFTQGYGAHLFGDYSKIRRSIFLVTNGQYSEMVYNPWKDIVIPGIHRAPPVFTAGGPGVPDSVANAEPVFHNKKHLAFWGGTIVNDTRYSSGVRQYISKHFSDEPGFRIQVSSGKWGDIFTPMHESVFCLCPEGWWAWTPRPYEAILSGCIPVLLSDDLEYPFERFVDWQKISIKISPQRIADVPSILRSISTEQISAIQANIVRSWQYFHFTEKYESGYATDMILRELAKKKVAHMPHAGNRLTRREYEDEWGFNTARTTENGANVQRRGAFQDRIPVSSIMRSKTDCDPTDPLRVKVRKSKPPTTDRTHCHGVSTLEGSRECTRPQNFGNLLVPGANTYILLDPYDHTFEIVPGAIVSTEGITLRAMESSAMRASSITVAVQASVDRVFMHLAKLAEVWKGPISLAILVDNPENDETAVRNLVKTNSVLQKWVDFHFVRRRRPMSNIGQVTYYPINMLRNVATQQVKSDWIMVLDLDVLPNSCMSAFMEQVRLAETSYASAYSTGTCPGLMAYVPPALELPENASLPTDGLVSDMGKTCTLLTKPAAVNALREGGLRPMHMYFNPAYMPTNHSRWMVTNGFFEVDYSVRFEPYYIARSNIPLFNDSFVDRGGNFAQQVYHMFAAGYRFIILPDVFTIDIPHSVASRASGFQKSLSLWEDFVAYTSELYGVSQVNGVARGPEYNAMKARLALEVLKFPAAAYDKEVTKSLFGAPTTLQEGRLSGRSKDPAQFVLVTITYQRTDLVKAILEHYCSSPSLWGIVIVWNNVGEPVPREQDFIPRCRKPIFFRPQGTNLIANRYRLSNLPPDAPDAVFLIDDDLIFSTDAVEFAFRTWATHQDQIVGFIPRSAKQKAGGVWEYGVQPEVDSDHEYHFILLGASFIHKKHFSTYWRSPEEIISLVNSVMNCDDLAMNFAVAAETGLPPIWVDAQYSRRSATGQFQANVDHFKIRSDCIGQFVRIYNGSPLVPGDIVVRPVGKNFNRPMPHVN* # PASA_UPDATE: g426.t1, single gene model update, valid-1, status:[pasa:asmbl_6113,status:12], valid-1 NODE_3482_length_3364_cov_36.0529 . gene 163 2616 . + . ID=g426;Name=g426.t1 NODE_3482_length_3364_cov_36.0529 . mRNA 163 2616 . + . ID=g426.t1;Parent=g426;Name=g426.t1 NODE_3482_length_3364_cov_36.0529 . five_prime_UTR 163 182 . + . ID=g426.t1.utr5p1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 163 337 . + . ID=g426.t1.exon1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 183 337 . + 0 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 580 686 . + . ID=g426.t1.exon2;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 580 686 . + 1 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 933 988 . + . ID=g426.t1.exon3;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 933 988 . + 2 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 1103 1201 . + . ID=g426.t1.exon4;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 1103 1201 . + 0 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 1351 1466 . + . ID=g426.t1.exon5;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 1351 1466 . + 0 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 1676 1857 . + . ID=g426.t1.exon6;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 1676 1857 . + 1 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 2181 2256 . + . ID=g426.t1.exon7;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 2181 2256 . + 2 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . exon 2466 2616 . + . ID=g426.t1.exon8;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . CDS 2466 2499 . + 1 ID=cds.g426.t1;Parent=g426.t1 NODE_3482_length_3364_cov_36.0529 . three_prime_UTR 2500 2616 . + . ID=g426.t1.utr3p1;Parent=g426.t1 #PROT g426.t1 g426 MTEKCMDYYASLFLESVARVEQDMVMGEDSEGTKIKNHITNIVPILQDPKITIENKLRVLMVYVIIKNGLADADLQKVLDHAQIPADERAAIENLKQLGVQVSTSQSEKKKKAFKRRDRNMDGVYSLSRWTPLMKDILEDVCEERLDKDDFPYVREADAGASAEVAASGDAGAQSVRSSKPGWANKAKEKKEGKDASPWKVEAKAGPKIIVFVLGGVTYSELRVAYEVMRSRQREVVIGSTHLLTPKRFVADLQSLDKPLSDVNPDHVGISIGN* # PASA_UPDATE: g12204.t1, single gene model update, valid-1, status:[pasa:asmbl_7517,status:12], valid-1 NODE_4671_length_1347_cov_34.5967 . gene 179 977 . - . ID=g12204;Name=g12204.t1 NODE_4671_length_1347_cov_34.5967 . mRNA 179 977 . - . ID=g12204.t1;Parent=g12204;Name=g12204.t1 NODE_4671_length_1347_cov_34.5967 . five_prime_UTR 842 977 . - . ID=g12204.t1.utr5p1;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . five_prime_UTR 632 643 . - . ID=g12204.t1.utr5p2;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . exon 842 977 . - . ID=g12204.t1.exon1;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . exon 456 643 . - . ID=g12204.t1.exon2;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . CDS 456 631 . - 0 ID=cds.g12204.t1;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . exon 179 291 . - . ID=g12204.t1.exon3;Parent=g12204.t1 NODE_4671_length_1347_cov_34.5967 . CDS 179 291 . - 1 ID=cds.g12204.t1;Parent=g12204.t1;3_prime_partial=true #PROT g12204.t1 g12204 MPVSVSVSRSRESGVSKGYAFVEFVDVATATALVESSLSVLEIDGARVKVEYCNSRGRSANDAMSTEDMWACIACGGHNFKKSDVCIHCGTECHHP # PASA_UPDATE: g9268.t1, single gene model update, valid-1, status:[pasa:asmbl_6243,status:12], valid-1 NODE_3581_length_3163_cov_31.9446 . gene 233 3075 . + . ID=g9268;Name=g9268.t1 NODE_3581_length_3163_cov_31.9446 . mRNA 233 3075 . + . ID=g9268.t1;Parent=g9268;Name=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 233 381 . + . ID=g9268.t1.exon1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 233 381 . + 0 ID=cds.g9268.t1;Parent=g9268.t1;5_prime_partial=true NODE_3581_length_3163_cov_31.9446 . exon 498 611 . + . ID=g9268.t1.exon2;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 498 611 . + 1 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 889 1066 . + . ID=g9268.t1.exon3;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 889 1066 . + 1 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 1236 1359 . + . ID=g9268.t1.exon4;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 1236 1359 . + 0 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 1589 1650 . + . ID=g9268.t1.exon5;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 1589 1650 . + 2 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 1909 2033 . + . ID=g9268.t1.exon6;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 1909 2033 . + 0 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 2419 2552 . + . ID=g9268.t1.exon7;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 2419 2552 . + 1 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 2838 2950 . + . ID=g9268.t1.exon8;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 2838 2950 . + 2 ID=cds.g9268.t1;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . exon 3034 3075 . + . ID=g9268.t1.exon9;Parent=g9268.t1 NODE_3581_length_3163_cov_31.9446 . CDS 3034 3075 . + 0 ID=cds.g9268.t1;Parent=g9268.t1 #PROT g9268.t1 g9268 VGADASPAPADAPAEHPLLAGKVRRGSLTHENFMAANHSSPGFGESFGMRPTDGDRDEVQRRFEESCIMELKNQLNVERMPTYKRTTTLGLLDMAPFARNAVESVVQDSFTRCFESRPSHPWNWNFYLFPLYLVGVFTRYCILFPLRLVCLLIGFLLFAIMMVATIPMGAAARDRWQKRAIRMLAVCFIMSWTGVIKYHGVCPPRRPNQVFVANHSSLIDVVVLMGERPYSLVGQKHGGVIGFFQDYVLGSMNCLWFDRMEANDRVVVARRIREHISNPLNPPLIIFPEGTCVNNEYVVMFKRGAFDLGATVMPIAIKYNKIFVDAFWNSRRQSVLSNFSLSARLF* # ORIGINAL: g1458.t1 original gene structure, not modified by PASA NODE_4119_length_2162_cov_20.9415 AUGUSTUS gene 2 133 . + . ID=g1458;Name=g1458.t1 NODE_4119_length_2162_cov_20.9415 AUGUSTUS mRNA 2 133 . + . ID=g1458.t1;Parent=g1458;Name=g1458.t1 NODE_4119_length_2162_cov_20.9415 AUGUSTUS exon 2 133 . + . ID=g1458.t1.exon1;Parent=g1458.t1 NODE_4119_length_2162_cov_20.9415 AUGUSTUS CDS 2 133 . + 0 ID=cds.g1458.t1;Parent=g1458.t1 #PROT g1458.t1 g1458 SLHGVSLRRIGGDAWLYKELCTSITSRLEHPAKMPATVVTTDK* # ORIGINAL: g10986.t1 original gene structure, not modified by PASA NODE_1743_length_9445_cov_41.629 AUGUSTUS gene 7997 8856 . + . ID=g10986;Name=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS mRNA 7997 8856 . + . ID=g10986.t1;Parent=g10986;Name=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS exon 7997 8236 . + . ID=g10986.t1.exon1;Parent=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS CDS 7997 8236 . + 0 ID=cds.g10986.t1;Parent=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS exon 8328 8429 . + . ID=g10986.t1.exon2;Parent=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS CDS 8328 8429 . + 0 ID=cds.g10986.t1;Parent=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS exon 8713 8856 . + . ID=g10986.t1.exon3;Parent=g10986.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS CDS 8713 8856 . + 0 ID=cds.g10986.t1;Parent=g10986.t1 #PROT g10986.t1 g10986 MRLAAFAALRPSGSDAFTNVVPATAYGSVIPVTCPVEHLPVKLRQPILSSPPVEVPGVRTVSVAAERETGVGAFVKPGLLSKKPTFPQYKSGASTESFLEMERKAFNKDMTARQNLLVIVAALKATKNTYVGPNTILVDGNSLQKFLGPFLEKIARESRVK* # ORIGINAL: g10984.t1 original gene structure, not modified by PASA NODE_1743_length_9445_cov_41.629 AUGUSTUS gene 286 2183 . - . ID=g10984;Name=g10984.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS mRNA 286 2183 . - . ID=g10984.t1;Parent=g10984;Name=g10984.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS exon 1785 2183 . - . ID=g10984.t1.exon1;Parent=g10984.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS CDS 1785 2183 . - 0 ID=cds.g10984.t1;Parent=g10984.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS exon 286 1290 . - . ID=g10984.t1.exon2;Parent=g10984.t1 NODE_1743_length_9445_cov_41.629 AUGUSTUS CDS 286 1290 . - 0 ID=cds.g10984.t1;Parent=g10984.t1 #PROT g10984.t1 g10984 MVVRRRKASLPAVRQGLPVKRHCAVALLTLMLVLPLAVWVVPSAALSVNAPDSLDKRPETDSVERLKTTGLSHSAALVDDAAQRRMPAAAISVDAVTREQLSATQAADGGIDTDDGATPIRGLNLARRAAINFPQCTTLQTHLASYQVQIEQIDADIDAAVAVAQDILDINDNVLSAVDDVCGLMHALTAIVDLSKLLGKLPYVGEVIAVVSVAAGAVLPSAQTLCSALGDFEAIVKDPAEAAGEIVDGVDAIKERLQVVSDYCGTASTLVDRAELVGSQLCAQPLDAGCGAAVAAMVAGEALVADTAQKISSIIAAAPHVAQIASTLSSISEKADAVLGPLQDIVSLLNTLTPYLNYIPSCAPSIPAHCVNVPYPCGTSWTCCGKVFGRCVCKYPNPKICHSNICTSYVPAICTPSLDALLQSLGITIPSLPGIDFLSVKVPSFPAIGFPQSLLTADIGLPVCVLG* # PASA_UPDATE: g10985.t1, single gene model update, valid-1, status:[pasa:asmbl_2498,status:3], valid-1 NODE_1743_length_9445_cov_41.629 . gene 4123 6927 . + . ID=g10985;Name=g10985.t1 NODE_1743_length_9445_cov_41.629 . mRNA 4123 6927 . + . ID=g10985.t1;Parent=g10985;Name=g10985.t1 NODE_1743_length_9445_cov_41.629 . five_prime_UTR 4123 4514 . + . ID=g10985.t1.utr5p1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . exon 4123 4751 . + . ID=g10985.t1.exon1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . CDS 4515 4751 . + 0 ID=cds.g10985.t1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . exon 4888 4951 . + . ID=g10985.t1.exon2;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . CDS 4888 4951 . + 0 ID=cds.g10985.t1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . exon 5143 5342 . + . ID=g10985.t1.exon3;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . CDS 5143 5342 . + 2 ID=cds.g10985.t1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . exon 5524 5610 . + . ID=g10985.t1.exon4;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . CDS 5524 5610 . + 0 ID=cds.g10985.t1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . exon 5913 6927 . + . ID=g10985.t1.exon5;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . CDS 5913 6650 . + 0 ID=cds.g10985.t1;Parent=g10985.t1 NODE_1743_length_9445_cov_41.629 . three_prime_UTR 6651 6927 . + . ID=g10985.t1.utr3p1;Parent=g10985.t1 #PROT g10985.t1 g10985 MDTSSAHFFAPTWLSVGSAAPPGTARPLESTTDGGRADAHTNGGTHGTDVHRQGRSQSLDPGRREQRQHGADSELDRDFPTLGPGKGAKSGATGASMPVWGKSDGDIKTKLAVPPPSAAGSGGMMTLGRTSTGATLEPNSAAEAEKQRAQLKMLQQLVPSQPVNPAKNRFVKPKLTTAKPVSPLSQAIKGPAAPKKALPPNETAAPRGRSMSDGRPLASQQGVSRPMPAGVVLGTKTGNKRQFFEMLKGKDSATSGESGVHSSPPLSPEQESYDMDHDNHRPSSRDAAGVLSDGEAVSQNHILPASSAPLAIPGSFGPRNADHSDPSTGWNGGNVHSGVGGVGGDGPISSSLEDEKRFLRRLGWEEAEDDRGDDDDATCWITEEEMNQFRIQATDINSKKTTLRASLTQKLAPRVGVSLPVAAEEVVPDSLSSSESSDEDS* # PASA_UPDATE: g1310.t1, single gene model update, valid-1, status:[pasa:asmbl_10035,status:12],[pasa:asmbl_10036,status:12], valid-1 NODE_934_length_15757_cov_41.3674 . gene 44 2590 . + . ID=g1310;Name=g1310.t1 NODE_934_length_15757_cov_41.3674 . mRNA 44 2590 . + . ID=g1310.t1;Parent=g1310;Name=g1310.t1 NODE_934_length_15757_cov_41.3674 . five_prime_UTR 44 44 . + . ID=g1310.t1.utr5p1;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . exon 44 185 . + . ID=g1310.t1.exon1;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . CDS 45 185 . + 0 ID=cds.g1310.t1;Parent=g1310.t1;5_prime_partial=true NODE_934_length_15757_cov_41.3674 . exon 522 1307 . + . ID=g1310.t1.exon2;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . CDS 522 1307 . + 0 ID=cds.g1310.t1;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . exon 1501 1935 . + . ID=g1310.t1.exon3;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . CDS 1501 1935 . + 0 ID=cds.g1310.t1;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . exon 2140 2590 . + . ID=g1310.t1.exon4;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . CDS 2140 2487 . + 0 ID=cds.g1310.t1;Parent=g1310.t1 NODE_934_length_15757_cov_41.3674 . three_prime_UTR 2488 2590 . + . ID=g1310.t1.utr3p1;Parent=g1310.t1 #PROT g1310.t1 g1310 IYGHEPGAPVLSPFVCHSFGTVNTPYGALAIAVQRHQHDRGFLEQLPGKAFSPKADDSKSKFVFDENAFEFDDNCNDGGLCTTDGPMSADDMAWQRENSPLCFRRTADSIPPQHELNAANATNATTTPADALVRRRPSSSTSSLSTLSSTLSRSIPKPDLNDAAGVSSHASVNMCSDSAPERPAAGEDVSMTNTVRDSIFAPATRRVTMAALCAANVGSIPSVQHPSPPRPKPSVALGTVPTVLGLRHGAAVGSPPAVRRSLFSSSSIAVADGGVLGNRRTSLTRRKLDFTQGVWAPSTPLRALVGSFEESILSGRMSLSPAVSLDGFVAQIGACGMGKCPAHVSVPFSATFFRLEGEDTPSPYVGMIDLDRATPSTSALPGARSSLPADVIPIATAAGQPQNNRSGNNGSNSSIIINSSSNPLLNDESVDASGVAHNPHRGLFRVPSKGMVQTIIFNQQRTVIKVFLVPYDLTDMPAASKTFIRQRTVTDTTPSRLKYAIHLKFVSTKRGHVYLYGSSKVVFSHRAPDSSKGITVVSDGPRNPQYAPLTSAERTAMKSKRKGHGVVAE* # ORIGINAL: g1313.t1 original gene structure, not modified by PASA NODE_934_length_15757_cov_41.3674 AUGUSTUS gene 7723 9965 . + . ID=g1313;Name=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS mRNA 7723 9965 . + . ID=g1313.t1;Parent=g1313;Name=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 7723 8147 . + . ID=g1313.t1.exon1;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 7723 8147 . + 0 ID=cds.g1313.t1;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 8248 8591 . + . ID=g1313.t1.exon2;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 8248 8591 . + 1 ID=cds.g1313.t1;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 8786 9256 . + . ID=g1313.t1.exon3;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 8786 9256 . + 2 ID=cds.g1313.t1;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 9622 9965 . + . ID=g1313.t1.exon4;Parent=g1313.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 9622 9965 . + 2 ID=cds.g1313.t1;Parent=g1313.t1 #PROT g1313.t1 g1313 MNPETVPSAEQRTLGDDEVDVEEASADMDHDGALEAIGFGRFQLLLVTLCGWANSSEAVEMMSVSFVMDELTTDSSFKSAIGAIIFLGMFVGGPIFGAYADRGGRRWCLLITLTINGLGGFLSALAPNLGLLLFLRFVSGIGVGGSIPVVFTYFCEFLPKSSRGRYMSVIASCWMIGAVLTAGWAWVILPRSFDVVIFGSSFTPWRVFLAACGLPSLISAFAVVYAPETPRYLWASGQRQKALDIYSRMYASNHGVDQSVMSFNPNDFVTSNTLSNGNALEDDYVFGDENTDGVGASGIQEYSDDAIGTNADDENVGLVDTRRRRRVRRTRFESASRILSLFKPPLLRPSLQLMVIWFSLSFGYYGLSLWMPTYFKVSAVSVYMSAFLSAVAQLPGNILSILFIDTFGRNRTLALTMTVAAVAVFVLLRVHQAWEVTLMSCLFSAITVGGWNALSIVSTELYATDKRSTAYGVFASVGRIAAIAGIFVFGAFVHLHPAIPLTIIAVMLAVGGIVALWLPQTSQRAIQ* # ORIGINAL: g1312.t1 original gene structure, not modified by PASA NODE_934_length_15757_cov_41.3674 AUGUSTUS gene 5784 6227 . - . ID=g1312;Name=g1312.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS mRNA 5784 6227 . - . ID=g1312.t1;Parent=g1312;Name=g1312.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 5784 6227 . - . ID=g1312.t1.exon1;Parent=g1312.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 5784 6227 . - 0 ID=cds.g1312.t1;Parent=g1312.t1 #PROT g1312.t1 g1312 MFLRPSLSLGGGKPRGGAAIADSRMDVVHNAVMHEQQSGYSANDDAPVGAQLPRDAASPAITDPPSVAVDGDGGREMHKLDLPLLPYNHTLRQGNGSVGFGANETSFRPSGSFVEVRMNELQSLWRWDVANKASAPIVLLSNGPVML* # ORIGINAL: g1314.t1 original gene structure, not modified by PASA NODE_934_length_15757_cov_41.3674 AUGUSTUS gene 10732 12375 . - . ID=g1314;Name=g1314.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS mRNA 10732 12375 . - . ID=g1314.t1;Parent=g1314;Name=g1314.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 10732 12375 . - . ID=g1314.t1.exon1;Parent=g1314.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 10732 12375 . - 0 ID=cds.g1314.t1;Parent=g1314.t1 #PROT g1314.t1 g1314 MPPPVVAMLDYGAGNVRSVINAVRECGYEVALISDPADIERADRLIFPGVGSFGSAMQRLRDGGFVEPLRRYIAADKPFLGVCLGLQTLFEASEESPGVEGLCVIPGIVRRFDSSSLAVPHIGWNGVRLLKASAVLDVSSNVEERFYYVHSYHAVADARNADWILALTDYGSPFVAAVQKGNVVAAQFHPEKSAAAGLAFIRRFLHTPAGSFAPSGASIPRGIQCTSLARRVIACLDVRTNENGDLVVTKGDQYDVKEKDGRVRNLGKPVELATRYYLEGADEVTFLNITSFKNSPLQDQPMLEVLRQTSAKVFVPLTIGGGIRDVVDPDGTVHPALEVAGTYFRSGADKVSIGSDAVEAALELQRRGGVPDGSTGIEQIAHVYGSQAVVISIDPRRVYVNSPSDVPHHTFKTSYPGPNGEAYCWYQCTVQGGRACRDIGAYEVARACERLGAGEILLNCMDKDGTNSGFDIELVRDVSDAVRIPVIASSGAGCAAHFVDVFNGTGACAALAAGIFHRREVPICAVKVAIAAAGIPVRPFVADAPVL* # ORIGINAL: g1311.t1 original gene structure, not modified by PASA NODE_934_length_15757_cov_41.3674 AUGUSTUS gene 2813 5631 . - . ID=g1311;Name=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS mRNA 2813 5631 . - . ID=g1311.t1;Parent=g1311;Name=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 5605 5631 . - . ID=g1311.t1.exon1;Parent=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 5605 5631 . - 0 ID=cds.g1311.t1;Parent=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 5414 5462 . - . ID=g1311.t1.exon2;Parent=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 5414 5462 . - 0 ID=cds.g1311.t1;Parent=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 2813 5082 . - . ID=g1311.t1.exon3;Parent=g1311.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 2813 5082 . - 2 ID=cds.g1311.t1;Parent=g1311.t1 #PROT g1311.t1 g1311 MVLTGCDHRLCERDKTEKTPFASLTAYQSPRRPHDRHDEDDDEDDAHTLKERLLFLETRLHKRTKFSRRNIRLLVAFLAFVLFVAIALSVALGVAIIRSETDPVDTTCIQTFYVTSVASLDAFASLGCTQVGGLVVNGSYFTASPPNNMTFPSLTIVTNTVAIVSWNETRLGPTSLSFPALVQTGGLLVQDAMLTFLRLPALLYAGNVRMSVVSFVDGLDFPKLTAAASLAFDDVFLHGELGFPALGSVSGNITLHATRTTGDLFFPVLEFAGLIDIEGPLRETGDGGVRAPEIRFPSLANARGIVVFNIPFTGGVFFPRLKEIQFFTLGSAVFEFYSTNGTIVKHNFDIHSLESASFVIVRATFGIPSIQFSSLKRADTMSFDGNTFLEHIDFPVLETVGDLYFGTNTNLVSVSFDALTIATQGLRFIGHSALREVSAPSLFLGVLLFSLNTVLETISFPVLLAGSMVIAANSALTYVEFPQLLGIGLASFFQNTALESISMPALMEMSERGWVYEAGPSSLYWVIAQSDILGLFNVSFGISVGLFDLGRVIAGGSFSAFGNDNLTSINLGGVLDSGNTIIVSNNPMLCPGDILIPSSAVLRCGCAFSRNGIDNPSCNMSVPAGGGAFTCPAVNRSSCIPRSNPASNLQVTYPDSSNRRRDTGGDRRVPVDVRAIIDRKLEAVRPRLPVSQLSPVTVDHASMGRGSVSADRALLRSHPGDGMQRGNDHAAASDAGWDGRFVSSGATAHTIRELRREVDSLRRQLREHERRGKAGGDAGPH* # ORIGINAL: g1315.t1 original gene structure, not modified by PASA NODE_934_length_15757_cov_41.3674 AUGUSTUS gene 12835 15645 . + . ID=g1315;Name=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS mRNA 12835 15645 . + . ID=g1315.t1;Parent=g1315;Name=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 12835 12877 . + . ID=g1315.t1.exon1;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 12835 12877 . + 0 ID=cds.g1315.t1;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 12993 13067 . + . ID=g1315.t1.exon2;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 12993 13067 . + 2 ID=cds.g1315.t1;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 13194 13858 . + . ID=g1315.t1.exon3;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 13194 13858 . + 2 ID=cds.g1315.t1;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS exon 13953 15645 . + . ID=g1315.t1.exon4;Parent=g1315.t1 NODE_934_length_15757_cov_41.3674 AUGUSTUS CDS 13953 15645 . + 0 ID=cds.g1315.t1;Parent=g1315.t1 #PROT g1315.t1 g1315 METTLRRRGVYWSAAAAAHPPRTASGHTVPSSVRTQPNNGKAGRRLRPCSRPSAHAHNQSQVQPPKPSVRVDPVIFVDVPASVPLGDRNAYSVGGQPTGHLSGDSYREQLLSDGNVKETTGDMAFRPYFEAVVVGGDDYSDNGSIESAEARYDGRTYMHATDASAAAQPDVPARMEALDGTTASGSARLKDLCVEDRTKIASLVNELAKANTERQRAIQALAEERKNQEVKMNRLRDECRQTTDAAEDIRPDYCCSRVVLSLCVSVRSIDLSPPHSRVASVTSDRHARHRGIIPDDNEEEVRVEKAKEHERVWNSFKKAHDKKQEEIRSNASVSVHGDADLNSTSTPRGGDKDVRRSATRRSLDAALGRASGSGSGNGGTRISEGLSKSLQAEFERVEAATSTSFPMGERGSARVGGDHVGGVFPSAVNPFASVSAVEIEAVIGAKVRDEVARQSAAANQNQPQYNTNPPPPPHAHQQQHSYVQQYPQMGPLPFHNHYQQQQQQQQQQQQQQQQPSVIPIVLSIPPYAFYGTDGGMYPFSGPPHTAWAGYHRPVDRPGVPSDPSATGERGNVRGAAPTYLSGAGAQAPIVVTSEATQDSVATQASTYRDGQTASIAPALSVSVASLSRDEVVSERDILSKYLEQNASPGKLSDAVVQSSTPAAAARTHVTFSPQAVTGTRRAIAVDSVVHTCWLCGGAEELNAECDWCVRKRAKRRATEMIADLKTRLEKEGVSTTHVAHTRSNTGLQHAADRYGDGQHLASVAPAVVGTARAHVGAGSRGSPAIHVIKDGKSHGANHRSRHHVTRDAVDAEAPLHLADLIDAIE # PASA_UPDATE: g4873.t1, single gene model update, valid-1, status:[pasa:asmbl_10081,status:3], valid-1 NODE_949_length_15591_cov_43.4986 . gene 12008 14453 . - . ID=g4873;Name=g4873.t1 NODE_949_length_15591_cov_43.4986 . mRNA 12008 14453 . - . ID=g4873.t1;Parent=g4873;Name=g4873.t1 NODE_949_length_15591_cov_43.4986 . five_prime_UTR 14426 14453 . - . ID=g4873.t1.utr5p1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . exon 13821 14453 . - . ID=g4873.t1.exon1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . CDS 13821 14425 . - 0 ID=cds.g4873.t1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . exon 13488 13661 . - . ID=g4873.t1.exon2;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . CDS 13488 13661 . - 1 ID=cds.g4873.t1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . exon 13188 13303 . - . ID=g4873.t1.exon3;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . CDS 13188 13303 . - 1 ID=cds.g4873.t1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . exon 12870 12957 . - . ID=g4873.t1.exon4;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . CDS 12870 12957 . - 2 ID=cds.g4873.t1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . exon 12008 12594 . - . ID=g4873.t1.exon5;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . CDS 12102 12594 . - 1 ID=cds.g4873.t1;Parent=g4873.t1 NODE_949_length_15591_cov_43.4986 . three_prime_UTR 12008 12101 . - . ID=g4873.t1.utr3p1;Parent=g4873.t1 #PROT g4873.t1 g4873 MVNMRGYAFWLRLPGRHHGCAVPRAAPVQYGAIHTPRHDDAIRTFASCHALLSGKVPKKTSILFFGSDDFAIATLKRLHESRSSRDALSSSSPSSLPNRVIDHIEVVCPVDKPAGRGKELRPVPMKVYAQSQGIKVHDAPATKGVAGFEGWALPKPHCADGGLSKDKFDFGIVVSFGRLLPAWVIDAFNIGAINLHPSLLPRYRGAAPLHRVIMNGDALSGVSVIRLAKNEFDSGRILLQKRHVVRPDADFDALHDELANVGATSMYHAIQHFESVWPNAWAQAETHVTHAPKVTREDGYVTDWASESVYSVYRKFLALGDSLRSHASEGIHTGFEGNTIRLFDLRPDATEMNAVRAIHRTRLEQDPAFIALCADEGLTATECLDRHAPLHVALSAQAAVADAPSDTQPTSTSPPTSVPGDVFFDNKRKILRVKCADGWIVVGHVQFEMRKPISAVDFNNAYIKKLAKTGQTVRFGPMRNSGGKGGKAVGA* # ORIGINAL: g4874.t1 original gene structure, not modified by PASA NODE_949_length_15591_cov_43.4986 AUGUSTUS gene 15002 15505 . + . ID=g4874;Name=g4874.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS mRNA 15002 15505 . + . ID=g4874.t1;Parent=g4874;Name=g4874.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 15002 15505 . + . ID=g4874.t1.exon1;Parent=g4874.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 15002 15505 . + 0 ID=cds.g4874.t1;Parent=g4874.t1 #PROT g4874.t1 g4874 MGAVSLSIVTSAVRTSSHSHHVPLARLSCTAPAIRYFASASRFHITANPSPSVSKSWVTNTLRRRFTHSNASPATESAVATGSASAARAAASEAVTVVTRENKIVGWWLVGCSAMVFGTVAIGGLTRLTESGLSIVSWDPIRGVKPPSTEEEWMAEFEKYKQFPEYQ* # ORIGINAL: g4872.t1 original gene structure, not modified by PASA NODE_949_length_15591_cov_43.4986 AUGUSTUS gene 8531 11695 . - . ID=g4872;Name=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS mRNA 8531 11695 . - . ID=g4872.t1;Parent=g4872;Name=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 11172 11695 . - . ID=g4872.t1.exon1;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 11172 11695 . - 0 ID=cds.g4872.t1;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 10709 10832 . - . ID=g4872.t1.exon2;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 10709 10832 . - 1 ID=cds.g4872.t1;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 9907 10311 . - . ID=g4872.t1.exon3;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 9907 10311 . - 0 ID=cds.g4872.t1;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 9027 9575 . - . ID=g4872.t1.exon4;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 9027 9575 . - 0 ID=cds.g4872.t1;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS exon 8531 8791 . - . ID=g4872.t1.exon5;Parent=g4872.t1 NODE_949_length_15591_cov_43.4986 AUGUSTUS CDS 8531 8791 . - 0 ID=cds.g4872.t1;Parent=g4872.t1 #PROT g4872.t1 g4872 MSLSCRTLVTQWDGAICIGFATLAACVLAFLYLMRPHLASNGAACRAHQAQPNAQLPIDSDSLTSTAHIDSVADIYSNDSASAHNCDIASIKSEITVDPLSGCAQLSSFKGVSAALRLRCLSANAIDGIFSQLPIIERQRHARLERMLCSQVLSLEGDRHAKMRKWMGAAFSQRMCRQYRPIIDSCARKAVATIRQKEASDAMFDLVPIADSFSLEIVLRILGIDPLHGEVMLRCAQSVEALFGAEDAHDLAARCARATPFVEACARRIEERMSILDSTAIAESRKSNDAGSADAVLGTPTGRARGTGSATLLNSKDANDKDARGVCSSEVDKVLDRFGSLVAGGEMTTEEAVANAIFLVMAGHSTTASLITLGVRDLIVSGEWTHASSTDIHSQHAPSIPTSGRSMRCDGDASFQSTQNTSTCPTGDAGVVCSNCASEDADVFSQFSDDITGADVSLENTISEDDVAVGSRLAHALLSRIAPVRTLYRTAACPNSFLLTNVDRSGSEGGDVATNATTIVLDLASAQNELHGRQNNDEDDDGASESTAAPLIAFGAGRHQCLGKSLGTMEAAILLGVLVKEFPSLHTVTHDIIGASASGFHCDEQRGTIGELKELWLRTG* # PASA_UPDATE: g4871.t1, single gene model update, valid-1, status:[pasa:asmbl_10082,status:12], valid-1 NODE_949_length_15591_cov_43.4986 . gene 2 7384 . + . ID=g4871;Name=g4871.t1 NODE_949_length_15591_cov_43.4986 . mRNA 2 7384 . + . ID=g4871.t1;Parent=g4871;Name=g4871.t1 NODE_949_length_15591_cov_43.4986 . five_prime_UTR 2 2 . + . ID=g4871.t1.utr5p1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 2 69 . + . ID=g4871.t1.exon1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 3 69 . + 0 ID=cds.g4871.t1;Parent=g4871.t1;5_prime_partial=true NODE_949_length_15591_cov_43.4986 . exon 457 780 . + . ID=g4871.t1.exon2;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 457 780 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 1287 1631 . + . ID=g4871.t1.exon3;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 1287 1631 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 1783 2118 . + . ID=g4871.t1.exon4;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 1783 2118 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 2338 2952 . + . ID=g4871.t1.exon5;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 2338 2952 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 3562 3980 . + . ID=g4871.t1.exon6;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 3562 3980 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 4332 4992 . + . ID=g4871.t1.exon7;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 4332 4992 . + 0 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 5221 5438 . + . ID=g4871.t1.exon8;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 5221 5438 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 5671 5785 . + . ID=g4871.t1.exon9;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 5671 5785 . + 0 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 5896 5944 . + . ID=g4871.t1.exon10;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 5896 5944 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 6315 6546 . + . ID=g4871.t1.exon11;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 6315 6546 . + 1 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 6740 6836 . + . ID=g4871.t1.exon12;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 6740 6836 . + 0 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . exon 7015 7384 . + . ID=g4871.t1.exon13;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . CDS 7015 7352 . + 2 ID=cds.g4871.t1;Parent=g4871.t1 NODE_949_length_15591_cov_43.4986 . three_prime_UTR 7353 7384 . + . ID=g4871.t1.utr3p1;Parent=g4871.t1 #PROT g4871.t1 g4871 SLSTGLPVSSAQSTPVAGTQVQAPIWEDNPQITVTWASATSITVKHPIPQLANDRVIVGQIYTDKTIDSYFGAISDGPTSSNNADTLVFTVSEEQFVVGRTLYLHIEANGSSLVSFTKYSSSFYKELAFEAPVFSSDTVADQNIIFRANFAAMGALVMSKVPQPRTSVFDVNFTVKLYSKCPPTDSGDTSLVNQSLLISAVDAGAAINFSGLQPYSRYCVVVDARFNANISGTFLGVPSAFTRNEVPAFQDTFDDLSLAGSATDKRSLYLPYVPAVQNPNGFVRSYAVFIVNTMLKTVVNSMAVSAIDRPVKFTGLLPHTQYHVYLEANSTYDSEGNVNPILGRSAPFGTAHSPADDVAPIISTRGDTIDVSWSANAFSDVGDREGFNITYSLDRFIAGKWIEFLESEPGAIDGKFAFSGLPSGRFRVRVQTTGGGLYVQPTPPIEAENGVIAVSFVRTNAAAFRAKEGEFKAVIAQAVSRSSRRAALYAVTLDNVNILGVYQNGSNVDVAMYVKTVDAIVPAAAITKAVSDSNTINDMAARTALTLGSVEVSLGVNTQVQSSCTCANGGICDDGMFGSGACNCSSLLGLGGPQCNTSCDRLPGSTQMYGYGCTRNCLCKNGAACNATNGECTCTFGWMGVYCDVIRPPSQPNVTAVAETIDKKLAIHLRWAHVEDTGIGGRAWTNWRYEIKRSGCVSTSFSLEDVREYVDTEVVVNLDYSYFVTAFNSRNVSSQTALAGIAGLRKTEKPAPPYGQSVTPTLSSDNVKPVIKFAWKEDTDSGPIIRTYIFRDRIFIQSGLMTTTFEDMDVIYGQTYTYEIINQNSYGNSTALQFQGTASIGPSTSSSGGSIVAPVAGGVVGAIIGAAALVGAILCANKRKTRRKMEAIARAELELIDTVVRRPEIEQIEISGSYIHLKNRIGEGEFGEVYSANVTMVSEGSSKIVVCAVKTFKVTSLSSVEEIRSARSAFMSEIDLMRSIPTQGNVIALLGVCTQSDPNCMVLEFAAHGDLRHFVSDSKNSDLTSVDLLCFCIDIARGMEHLAKCQIVHRDLAARNCMVVAGPRPANLLEKGWKLSPKGQVIVKVADMGLSRDTQGSGDYYAVKTRNCKLPVKWMAIESLQKKIFTPASDVWSFGITVWEVFTRGSAKPYAGIDNFALAGFLEQNKRLDPPKNSPKEIHDIVSSCWRKHPETRPTFTQLVIQLRRAMTAVCGMQAGSNVDRVDTAPTFSGAGTEGNYGYDDPQQTDPQEVNVGKEALYALTVPDYAETCPE* # ORIGINAL: g9601.t1 original gene structure, not modified by PASA NODE_3032_length_4483_cov_40.4276 AUGUSTUS gene 282 931 . + . ID=g9601;Name=g9601.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS mRNA 282 931 . + . ID=g9601.t1;Parent=g9601;Name=g9601.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 282 433 . + . ID=g9601.t1.exon1;Parent=g9601.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 282 433 . + 0 ID=cds.g9601.t1;Parent=g9601.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 655 931 . + . ID=g9601.t1.exon2;Parent=g9601.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 655 931 . + 1 ID=cds.g9601.t1;Parent=g9601.t1 #PROT g9601.t1 g9601 MILEKVHKTLQIAAIPPEEMELTPIPVVKASIILLYRQQEELMVAADAIDRSQLADLQTLLREVVTQIAMMEDFIAKGDAESSNNTQGVTSVQPANTVDVSSVVNDSVLEESVRACLAEEAERLWRAVECEAAEAVFYSCRT* # ORIGINAL: g9602.t1 original gene structure, not modified by PASA NODE_3032_length_4483_cov_40.4276 AUGUSTUS gene 1390 4428 . + . ID=g9602;Name=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS mRNA 1390 4428 . + . ID=g9602.t1;Parent=g9602;Name=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 1390 1532 . + . ID=g9602.t1.exon1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 1390 1532 . + 0 ID=cds.g9602.t1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 1855 1921 . + . ID=g9602.t1.exon2;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 1855 1921 . + 1 ID=cds.g9602.t1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 2194 2256 . + . ID=g9602.t1.exon3;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 2194 2256 . + 0 ID=cds.g9602.t1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 2655 2813 . + . ID=g9602.t1.exon4;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 2655 2813 . + 0 ID=cds.g9602.t1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 3318 3401 . + . ID=g9602.t1.exon5;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 3318 3401 . + 0 ID=cds.g9602.t1;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS exon 3604 4428 . + . ID=g9602.t1.exon6;Parent=g9602.t1 NODE_3032_length_4483_cov_40.4276 AUGUSTUS CDS 3604 4428 . + 0 ID=cds.g9602.t1;Parent=g9602.t1 #PROT g9602.t1 g9602 MSWQGPPIGVRPGASQADAVQSGPSSNDWATRGSRDSNWSLGGQSDNWSTGGSISLAGNAPPNGHVTLSWGNDSNGRLGHGSFDNHEQVPKSLSCGSGHTVVAAKDGRCITWGKGQYGQLGQSDDKDRYEPTVIRPFAAVHISMVAAGDSHVLALSQHGDLFSWGAGFYGCLGHGDETHKASPAVVGTFRGYPVASIAAGGFQSFAINPSGAVCSWGRNQTGEIGQGTEQTVRSPRELASLRGRPVSRVFAGVSHTLVALQGGGCVAFGLNENGQLGTNDRTNRNVPDLVKNLDGVQIVDAECGKQHTVAASADGRAFAWGCGALGRLGLGHEMDEKAPREIPALQGRIVTSVTCGDSFSLAATADGETYFWGVFDGTGRGVGHNMGMRDPPPPTPVASLKDVSVKIVSAGPHHIVATGVHRAAASIAIVTEHGFPCFCPTCNPSG* # ORIGINAL: g8499.t1 original gene structure, not modified by PASA NODE_4014_length_2348_cov_34.8284 AUGUSTUS gene 279 2348 . - . ID=g8499;Name=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS mRNA 279 2348 . - . ID=g8499.t1;Parent=g8499;Name=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 2248 2348 . - . ID=g8499.t1.exon1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 2248 2348 . - 1 ID=cds.g8499.t1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 1796 1921 . - . ID=g8499.t1.exon2;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 1796 1921 . - 2 ID=cds.g8499.t1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 1384 1518 . - . ID=g8499.t1.exon3;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 1384 1518 . - 2 ID=cds.g8499.t1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 1142 1228 . - . ID=g8499.t1.exon4;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 1142 1228 . - 2 ID=cds.g8499.t1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 761 916 . - . ID=g8499.t1.exon5;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 761 916 . - 2 ID=cds.g8499.t1;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS exon 279 467 . - . ID=g8499.t1.exon6;Parent=g8499.t1 NODE_4014_length_2348_cov_34.8284 AUGUSTUS CDS 279 467 . - 2 ID=cds.g8499.t1;Parent=g8499.t1 #PROT g8499.t1 g8499 NSDIVSSYSFELAVTDNGWPPASVIARKTLNVTRVDPCATNSSGCDPNALCARTGPGNNTCTCVAEYWGDGRNCSAITDADLCYNGPAAACQQCTPGYTPVETLPCGSYRGQRVCKKICADIDECGRADNGACCSGVRCANSIGGFRCSDVHVLPSTVEGLVARGFTRTDILCHLASAGVDNATDITALTASISQEQLEASRSAGSSSRGSLAGAIIGGILGGIVLVAASVAADRWRSRRERASWAQKHADLLDSLGDLEKTAA # PASA_UPDATE: g14178.t1, single gene model update, valid-1, status:[pasa:asmbl_1156,status:12], valid-1 NODE_1307_length_12268_cov_41.22 . gene 962 5653 . + . ID=g14178;Name=g14178.t1 NODE_1307_length_12268_cov_41.22 . mRNA 962 5653 . + . ID=g14178.t1;Parent=g14178;Name=g14178.t1 NODE_1307_length_12268_cov_41.22 . exon 962 5653 . + . ID=g14178.t1.exon1;Parent=g14178.t1 NODE_1307_length_12268_cov_41.22 . CDS 962 5479 . + 0 ID=cds.g14178.t1;Parent=g14178.t1 NODE_1307_length_12268_cov_41.22 . three_prime_UTR 5480 5653 . + . ID=g14178.t1.utr3p1;Parent=g14178.t1 #PROT g14178.t1 g14178 MRDSLSPLTTGPTPRKDEYARRRSDYEVGKSDGVVTGRLPAAREANRSSEKQPQPAVGASGDNEDGASGEDHVPIVGLSVAKDGTRNLTVIVRYTLEIVAKVSLNRHLTYATQYQLGLQVLLPVVTAMLTMIDAHVLEQSIAVALLGAVVIYANCLIGDDLNIDDYAKRLHARKSCVHAIGRYAFPFKQIVQVLVGSYSGLLITYTAYCVFTSRILNVITFRSREMDLETTSAYQVNLVILVAMGTLHLLCSIFHWAATMGSFISCEAMWAVPVRVTASKAGDPSEGTNFVCHRIDRSLKRAWSLFCSFVLIVPKSEKLRGWIADVNNARDELEGVLQSAIVASRTQEMNDGCVSLHSLVSSLPSSPFWTSIQSFMHGELLCALSDGSNEVSKRAMSELRELDGVRSMYTLLSHTYLVCMQSSSAALRPFLRPGFGDAQTRGGEHIRVGLCPFEATEIKTGTPAEFRAEMCRANLATLALPLHDHQQSPEKLSHIAFATDSVTLSIMAAGSVRLCNIHTYKVISSPVDFVMESCYAFSPDGQSLAIGLSTGTVDLWNMATGQCIQSPDEHNGAVKSVTLTAPDGRTVASGGEDGVVRLWDVATGESRSLSGHKSAVMSVAFSCDGKTVASGGEDTILTLWDVAAGIKCRTFRGHTDTVISVAFQSPVSTMVASAGGGKDRTVRLWNVEKGKLCTIIIADTSNDLLKSVAFSPDGQTVTSVTAGGRVRLWDVNTGKSRTLSGHPDTKITCVAFSPDGQTVAGVFGQDSKTVRLWDLATSVESGTFFRHTDSVIRIAYSPDGKTVATISADDTVWLWDVPLDGSSSSRYDTVPLGGWDATEQSVGKDCLRVLNQIRSFDASRLWGVSCVAYSPDGTRVASGSQDENVVRLWDLSTGKSEILSAHTGKVTSVAFSPNGRIIASGSEDNTVRLWGTAFATAGAPRTLLGHSKPVTCVAFSVADEHLIVSGSLDKTVRLWDVSSCESVHILNGHTGFVSSVAFSPDGKTVASGSWDKTVRLWDVLNPKSRTLKGHTDCVNSVAFSPDGTTLASGGGDKTVRLWKVETVGECRTLSGHTDKVTSVAFSPDGKTVASGGEDKTVRLWDVATAGARPRSLSGLSSHVKSVGETQTAASGTADTRPLYDETAAGARSRSMSETTNHVNSVGERQTAASGTAAIKKRLSHYEEATGKPGTFSGFSNGVKSVAFSPDGKTVACGSFREALRLWDVDTGACKFVQESTYAGRLAPWGLNSKWRLDLSEILASEECSATFKNAIEAFGRQDSICKTLYETLKHSRLILSVCDHLKEKFAAKRPRGLSKNTEIFIGENAFRAAVAQFESIVWAWIEQVDVRGALRLDEITVAAEIAHSSSDISFSIPNKRKDRASVGMWNAIGSMSPGREKKSKSSELAFTVTIPLQRPDLATVVDRIIKSGWVSPNGLKPSAAFDATLYRVYVQLVLDMHRAKVDAKITWQTMVDKYVRPNILAFVPFRFDDNSAGIDAADVTASMLQ* # PASA_UPDATE: g14179.t1, single gene model update, valid-1, status:[pasa:asmbl_1158,status:3], valid-1 NODE_1307_length_12268_cov_41.22 . gene 7230 11012 . + . ID=g14179;Name=g14179.t1 NODE_1307_length_12268_cov_41.22 . mRNA 7230 11012 . + . ID=g14179.t1;Parent=g14179;Name=g14179.t1 NODE_1307_length_12268_cov_41.22 . five_prime_UTR 7230 7537 . + . ID=g14179.t1.utr5p1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 7230 7721 . + . ID=g14179.t1.exon1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 7538 7721 . + 0 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 8248 8478 . + . ID=g14179.t1.exon2;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 8248 8478 . + 2 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 8922 9098 . + . ID=g14179.t1.exon3;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 8922 9098 . + 2 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 9364 9515 . + . ID=g14179.t1.exon4;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 9364 9515 . + 2 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 9787 9998 . + . ID=g14179.t1.exon5;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 9787 9998 . + 0 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . exon 10260 11012 . + . ID=g14179.t1.exon6;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . CDS 10260 10263 . + 1 ID=cds.g14179.t1;Parent=g14179.t1 NODE_1307_length_12268_cov_41.22 . three_prime_UTR 10264 11012 . + . ID=g14179.t1.utr3p1;Parent=g14179.t1 #PROT g14179.t1 g14179 MATPEIDVDSILERLLAVRGERPGKQVQLGEQEIRGLCLKARDIFIKQPILLELEAPIKICGDVHGQYFDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCMHGGLSPDLHSMEQIKKVMRPTDVPDTGLLCDLLWSDPDKDISGWGENDRGVSFTFGADIVAKFLQKQDIDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFHILKPVDKKTLGADKKGRPKSPKKGAN* # ORIGINAL: g6699.t1 original gene structure, not modified by PASA NODE_1704_length_9589_cov_39.2223 AUGUSTUS gene 3997 5962 . + . ID=g6699;Name=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS mRNA 3997 5962 . + . ID=g6699.t1;Parent=g6699;Name=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 3997 4121 . + . ID=g6699.t1.exon1;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 3997 4121 . + 0 ID=cds.g6699.t1;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 4341 4675 . + . ID=g6699.t1.exon2;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 4341 4675 . + 1 ID=cds.g6699.t1;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 4874 4949 . + . ID=g6699.t1.exon3;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 4874 4949 . + 2 ID=cds.g6699.t1;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 5234 5354 . + . ID=g6699.t1.exon4;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 5234 5354 . + 1 ID=cds.g6699.t1;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 5585 5962 . + . ID=g6699.t1.exon5;Parent=g6699.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 5585 5962 . + 0 ID=cds.g6699.t1;Parent=g6699.t1 #PROT g6699.t1 g6699 MDVLWGVHCRALSAHLLCHHTEWMAATVDLIGSEWPRSRGARTASLCTSAQHPLPASIILVSPQHTSPPHCACDRHAVDSRGDVDAGTACAHRTPRDRVCVERAQCWSAGLSPNGITCPSPGNACGVGCDVAVVAHARIVAVEGDPEAVVCECVVVAPSFRSGGVGTAMMAMAEDYIRRLHMSRIYVGIESAHVAPFYRKLGFCESTMDVRPVRSRSAVSSAVLKCFGRPSHANESHTLPTAPQAPPDARDHTIVSATPHGNHDGIAAATPTGPLPDLRDSSAVPPPAPVPPPPLPPGTPHTNSAANTHSAHAGAVGRRKVSYMVLHLRHQPLPVSVGDDNSII* # ORIGINAL: g6696.t1 original gene structure, not modified by PASA NODE_1704_length_9589_cov_39.2223 AUGUSTUS gene 96 655 . - . ID=g6696;Name=g6696.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS mRNA 96 655 . - . ID=g6696.t1;Parent=g6696;Name=g6696.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 516 655 . - . ID=g6696.t1.exon1;Parent=g6696.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 516 655 . - 0 ID=cds.g6696.t1;Parent=g6696.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 96 374 . - . ID=g6696.t1.exon2;Parent=g6696.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 96 374 . - 1 ID=cds.g6696.t1;Parent=g6696.t1 #PROT g6696.t1 g6696 MAPNLHVPTEAVVVSMDGRDAAANEVDAGHYYAPVVLIHGFLGTGEWYWGCGLGEPDAEWRRSPNTQHRVIVTEVGPVSSLHDRACELFYQLKGGCVDYGEKHASECGHARYGKTCDTPLWPEWSEEHPVHLVGHSLGG # PASA_UPDATE: g6697.t1, single gene model update, valid-1, status:[pasa:asmbl_2394,status:12], valid-1 NODE_1704_length_9589_cov_39.2223 . gene 1489 2928 . - . ID=g6697;Name=g6697.t1 NODE_1704_length_9589_cov_39.2223 . mRNA 1489 2928 . - . ID=g6697.t1;Parent=g6697;Name=g6697.t1 NODE_1704_length_9589_cov_39.2223 . exon 1489 2928 . - . ID=g6697.t1.exon1;Parent=g6697.t1 NODE_1704_length_9589_cov_39.2223 . CDS 1489 2928 . - 0 ID=cds.g6697.t1;Parent=g6697.t1 #PROT g6697.t1 g6697 MDSLTLRLRLALCLALCATTQLCVVCAISPVGLNQALADDADSDWPPVGDNWPFFGRSAPFRSEDGSPNDERRDSHRADGNGHPWDPLGDSDAKHLVRLDVGGVFMTTRRGTLLRYDNTTRNFFHRAIYHADPMDSDSDATSNPLPIFVDVDYGQFEIALSVLRMGTSVMLDAYKDPTALVRVVAVAKALGLGIPGFEGITCLQEVRWAPVQMHGMYVNDQYSYAFLNARDGSEPGQTVGRVVVLAPKGVLSGTFVTLVGGFTRISLPPSSSSSGIVDVGPNGTHSVFVTESYLTRLPQPQTDGDWPLRLCPESSPGGNNNYRSWQNGLATPTCVYPFIFRRFFLPEPNIIYTCDNIAFPCSGNLDSKGRSATQLLIVFSNDLRSAVITSLFSPGEDSRPVTVERRPAAGLVLKIVGHPCIPDDHVIVPFAKQLIIVSPTLAQTSNYLLPKCVARRQLYDTNSGLLQNYYAAPFDVPPL* # ORIGINAL: g6698.t1 original gene structure, not modified by PASA NODE_1704_length_9589_cov_39.2223 AUGUSTUS gene 3330 3894 . + . ID=g6698;Name=g6698.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS mRNA 3330 3894 . + . ID=g6698.t1;Parent=g6698;Name=g6698.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 3330 3644 . + . ID=g6698.t1.exon1;Parent=g6698.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 3330 3644 . + 0 ID=cds.g6698.t1;Parent=g6698.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS exon 3775 3894 . + . ID=g6698.t1.exon2;Parent=g6698.t1 NODE_1704_length_9589_cov_39.2223 AUGUSTUS CDS 3775 3894 . + 0 ID=cds.g6698.t1;Parent=g6698.t1 #PROT g6698.t1 g6698 MGPKLRKRAPQSDGVYADERFVTGDAPIPSPTPTHKHTPTTSSSASADVPSCVSIYKYRRSGAGAYEHSHSSLLRTAVILAVCAVGLPLFAVAVVAAELCDISFPPFNWLRADSHYAVLLPLTIPVCTGLLFWNWMGFMLFKHN* # PASA_UPDATE: g6700.t1, single gene model update, valid-1, status:[pasa:asmbl_2393,status:12],[pasa:asmbl_2395,status:12],[pasa:asmbl_2396,status:12], valid-1 NODE_1704_length_9589_cov_39.2223 . gene 6119 9407 . - . ID=g6700;Name=g6700.t1 NODE_1704_length_9589_cov_39.2223 . mRNA 6119 9407 . - . ID=g6700.t1;Parent=g6700;Name=g6700.t1 NODE_1704_length_9589_cov_39.2223 . exon 8424 9407 . - . ID=g6700.t1.exon1;Parent=g6700.t1 NODE_1704_length_9589_cov_39.2223 . CDS 8424 9407 . - 0 ID=cds.g6700.t1;Parent=g6700.t1 NODE_1704_length_9589_cov_39.2223 . exon 6119 8205 . - . ID=g6700.t1.exon2;Parent=g6700.t1 NODE_1704_length_9589_cov_39.2223 . CDS 6676 8205 . - 0 ID=cds.g6700.t1;Parent=g6700.t1 NODE_1704_length_9589_cov_39.2223 . three_prime_UTR 6119 6675 . - . ID=g6700.t1.utr3p1;Parent=g6700.t1 #PROT g6700.t1 g6700 MFAFQRIDGVDVCFFGMHVYEYGTKCPEPNRRRVYIGYLDSVKWFSPRESRTDVYHEILISYMAYVKRLGYKAAHIWACPPSPGDDYIFYCHPDEQKVPKPKRLQDWYKTMLKKAEEEGVVSQWMDIQTEWQQEEIYTTTQIPYFEGDYWPNAMEEGLKELEQEARAESEDGGDAGKKGKKAGSKKGGASKGSSKKGAAKKAGAKANKRPQLQRQNSDLCERMYSNVDKLKDGFLFVKLQEEDECVAEIRDPDPAMTCDLMEGREQFLDLAREHHYEFGTLRRAKWASKMFLYHLHVPDDSQGYTFNCNTCKRSMTMGEQRWHCTSCEDFDMCATCYKTNTHHHPLQQANLGMDEEGGAGGKASASQQQRTQSIKRCITSLVHACSCQNPDCVPSCKKMKQVVQHTKSCTVKAPGCNICKQLVALCCFHAKHCNASPCLVPFCAGIKQRLQRQQQQQRLQQNQMAQRRMLMQRMQMQQQMGGGASAASAVVQAAAAPAPVATAAPSSIESLAAQQQKLLAMQRARQQAAQAQAQAQAQAQAQAQAQAQAQAQAQALQGSAAGAQGVGHNQAQLMMQKQQMLKQAQAQQAMAQAQAQQHAGQGGVRPPVGMGLPTAILQQQQQQQQQAHLAALASAGVGAGAGAGGGTNAGAGAGGIGSGLTPGQVQMHLKSIPATLKTITDEKARREQERALPGCSPERQAQLEQELIALEKRKRELSQRQFVLMGMHYQFLAESGQELKPDQQSIVNQLNLLRQKQQQQQQAAAAAAAAAGVAGGVGLGALGLLGQQHGQQSSPLLGAMGGSNPNGGGGGGAGGTGGNPNNAQGQQQKLMTLVDEL* # PASA_UPDATE: g7129.t1, single gene model update, valid-1, status:[pasa:asmbl_4092,status:12], valid-1 NODE_2343_length_6634_cov_41.1223 . gene 244 4114 . - . ID=g7129;Name=g7129.t1 NODE_2343_length_6634_cov_41.1223 . mRNA 244 4114 . - . ID=g7129.t1;Parent=g7129;Name=g7129.t1 NODE_2343_length_6634_cov_41.1223 . five_prime_UTR 3852 4114 . - . ID=g7129.t1.utr5p1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 3792 4114 . - . ID=g7129.t1.exon1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 3792 3851 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 3578 3664 . - . ID=g7129.t1.exon2;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 3578 3664 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 3393 3455 . - . ID=g7129.t1.exon3;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 3393 3455 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 3025 3282 . - . ID=g7129.t1.exon4;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 3025 3282 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 2815 2862 . - . ID=g7129.t1.exon5;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 2815 2862 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 2577 2639 . - . ID=g7129.t1.exon6;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 2577 2639 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 1868 2345 . - . ID=g7129.t1.exon7;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 1868 2345 . - 0 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 1421 1747 . - . ID=g7129.t1.exon8;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 1421 1747 . - 2 ID=cds.g7129.t1;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . exon 244 1226 . - . ID=g7129.t1.exon9;Parent=g7129.t1 NODE_2343_length_6634_cov_41.1223 . CDS 244 1226 . - 2 ID=cds.g7129.t1;Parent=g7129.t1;3_prime_partial=true #PROT g7129.t1 g7129 MSLFHGKQHHKVTITAAELQGSSKSGYLTKQGGVKSGKPSTGLLGLSHMSWKRRWFVLKGSLLFYFKSENDNELLGTIDLTNFCEVQDAEVRTKTPFCFEVISSSSSSVLLYADTKDEMLSWMSRIRKSFETDTAAPASAPAPLFSLGRSLEIELAVCKRKGQLNKQGGNVKSWKRRWFALKDDKLIYFKSFEDKKPLGIIDLHMCSSVTEAESENGVTNSFALVSPSRKFYFYADSRADMRGWIEDLEHAIPSTPGTKTPTLFSEDDELDTDDASSKRSSSRSLGRSQPSTGTSPKLQSLAGSRIASMADKTDAAGDRKSQSLPTAVLHQRLAAAKEGEIASLSPEAEANAVATLFRANSFASKMMKFYAKFVASTYLVKTLSGVMQHVLAAESMEVDPAKLKEGQSVEANQTALFGVCSDFLSAIVGARDSAPAQLREMCHHLSMEVKKRFPSSTTKAVGGFLFLRLFCPAIVLPEYFGLVAATQLPSPNARRTLILSTKVLQNLANGVEYGSKEAFMVPFNKFIVDKRQAADSYFDSFATPSGSSPLGDTADISPQQLKDATAVIQTRLAVLLLELIEDSRESSEEDLLPLIARIKELLKAGADTPRALIVGALEQDGMRVVADLCECTPITEADELSKALVTVFSFEGHVLALLKWAISHEVEQAGGAAKKARKLGKRGSLADMLGGGSSGSPSTNSVVGPSQSGSRKRGYFYKQGGTVKSWRKRWFVINQRYCRLEYYKDEKSAEGGENLGSVDLALCSSIGEGDAKTGIANSVELVTPQRVYQ # ORIGINAL: g7130.t1 original gene structure, not modified by PASA NODE_2343_length_6634_cov_41.1223 AUGUSTUS gene 4549 6634 . + . ID=g7130;Name=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS mRNA 4549 6634 . + . ID=g7130.t1;Parent=g7130;Name=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 4549 4626 . + . ID=g7130.t1.exon1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 4549 4626 . + 0 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 4774 4911 . + . ID=g7130.t1.exon2;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 4774 4911 . + 0 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 5195 5281 . + . ID=g7130.t1.exon3;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 5195 5281 . + 0 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 5401 5488 . + . ID=g7130.t1.exon4;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 5401 5488 . + 0 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 5666 5826 . + . ID=g7130.t1.exon5;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 5666 5826 . + 2 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 5969 6296 . + . ID=g7130.t1.exon6;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 5969 6296 . + 0 ID=cds.g7130.t1;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS exon 6445 6634 . + . ID=g7130.t1.exon7;Parent=g7130.t1 NODE_2343_length_6634_cov_41.1223 AUGUSTUS CDS 6445 6634 . + 2 ID=cds.g7130.t1;Parent=g7130.t1 #PROT g7130.t1 g7130 MSDNFSELLEQSECQILKNVVGTRCQFLAMSVAQLYFAQPNPNEWAFQGVGAVCLVKDNQKRSYFMKLMDPQSGGVAWEQEVYQELKYNKPRPFFHSFSGDNCTVGLCFAVGAEGEADKFKEKVDEIVKKRNAAGAAPRKSAPSAAGISAPGNAISAPTVSAPASVPTSLSNDISKSGGKGTVKGGKDKKGARPKISKLDISTPSDFRHVGHIGWDPDKGFDVNNIPPEWKALFDKAGVTNEQLQDKETAKIVMDFVEQHGGLSAPAPASLSAPAPAAAAGRGPAPAPPPGRGAPPPPPGGNRGPPPPPPAARDPAPAPPGRGAPPPPPPGGNRTAAPPPPPSRAGPPPPQAAGPP # ORIGINAL: g5075.t1 original gene structure, not modified by PASA NODE_568_length_21106_cov_48.9253 AUGUSTUS gene 16397 17381 . - . ID=g5075;Name=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS mRNA 16397 17381 . - . ID=g5075.t1;Parent=g5075;Name=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 17280 17381 . - . ID=g5075.t1.exon1;Parent=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 17280 17381 . - 0 ID=cds.g5075.t1;Parent=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 16982 17076 . - . ID=g5075.t1.exon2;Parent=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 16982 17076 . - 0 ID=cds.g5075.t1;Parent=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 16397 16484 . - . ID=g5075.t1.exon3;Parent=g5075.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 16397 16484 . - 1 ID=cds.g5075.t1;Parent=g5075.t1 #PROT g5075.t1 g5075 MGLLNLVGKVMFRSGDKTVRVAVDRLVRHPIYKKYVRKTKQFLVHDETNSASVGDFVKIQETTKISKRKHFTLLQIIQPVAKFFDGKTLYSNPK* # PASA_UPDATE: g5072.t1, single gene model update, valid-1, status:[pasa:asmbl_8226,status:12], valid-1 NODE_568_length_21106_cov_48.9253 . gene 122 1716 . - . ID=g5072;Name=g5072.t1 NODE_568_length_21106_cov_48.9253 . mRNA 122 1716 . - . ID=g5072.t1;Parent=g5072;Name=g5072.t1 NODE_568_length_21106_cov_48.9253 . five_prime_UTR 1471 1716 . - . ID=g5072.t1.utr5p1;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . exon 1072 1716 . - . ID=g5072.t1.exon1;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . CDS 1072 1470 . - 0 ID=cds.g5072.t1;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . exon 664 860 . - . ID=g5072.t1.exon2;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . CDS 664 860 . - 0 ID=cds.g5072.t1;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . exon 122 374 . - . ID=g5072.t1.exon3;Parent=g5072.t1 NODE_568_length_21106_cov_48.9253 . CDS 122 374 . - 1 ID=cds.g5072.t1;Parent=g5072.t1;3_prime_partial=true #PROT g5072.t1 g5072 MHPMMLARAARSLVPRGSRAWLLSSLSPCPRTTQRHRPFSAVAQSFGVLDAQNSSAGAESSPSAQASSTSTQTPKASAQVWNGPIQASKPPVSFYRRPLPTHLIPFSSSEGKAMFREALDMRGMEGYFTLAEQYITQSEPAYCGLGTMAMVLNALAVDPNKTWKGPWRWYTEELLECCRPLDYVKTQGMLFSEFSSLARCNGAKVDEFRADIATVDDFRHSFSLATSDPEKSHTTHLVVSYDRGTLSQTGQGHFSPIGGYHPGQDMVLVLDVARFKYPPYWVK # PASA_UPDATE: g5076.t1, single gene model update, valid-1, status:[pasa:asmbl_8228,status:12], valid-1 NODE_568_length_21106_cov_48.9253 . gene 17842 20902 . + . ID=g5076;Name=g5076.t1 NODE_568_length_21106_cov_48.9253 . mRNA 17842 20902 . + . ID=g5076.t1;Parent=g5076;Name=g5076.t1 NODE_568_length_21106_cov_48.9253 . five_prime_UTR 17842 18127 . + . ID=g5076.t1.utr5p1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . five_prime_UTR 18451 18457 . + . ID=g5076.t1.utr5p2;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 17842 18127 . + . ID=g5076.t1.exon1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 18451 18523 . + . ID=g5076.t1.exon2;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 18458 18523 . + 0 ID=cds.g5076.t1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 18809 18997 . + . ID=g5076.t1.exon3;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 18809 18997 . + 0 ID=cds.g5076.t1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 19304 19422 . + . ID=g5076.t1.exon4;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 19304 19422 . + 0 ID=cds.g5076.t1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 19846 19954 . + . ID=g5076.t1.exon5;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 19846 19954 . + 1 ID=cds.g5076.t1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 20198 20280 . + . ID=g5076.t1.exon6;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 20198 20280 . + 0 ID=cds.g5076.t1;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . exon 20755 20902 . + . ID=g5076.t1.exon7;Parent=g5076.t1 NODE_568_length_21106_cov_48.9253 . CDS 20755 20902 . + 1 ID=cds.g5076.t1;Parent=g5076.t1 #PROT g5076.t1 g5076 MDRYEKIEKLGEGTYGVVYKAQNQETGDIVALKSIRLDSEEEGVPCTAIREISLLKELKHVNIVRLHDVLHTDKKLTLVFEYCDQDLKKYMDSQGGDIGVMTMKSFLFQLLRGVAFCHEHRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVRAYSHEVVTLWYRAPDVLMGSRRYSTSIDIWSAGCIFAEMAAGGRPLFPGSSTSDQLARIFKVSMCCWYLSVVSIGGVWGVL* # ORIGINAL: g5074.t1 original gene structure, not modified by PASA NODE_568_length_21106_cov_48.9253 AUGUSTUS gene 12119 15440 . + . ID=g5074;Name=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS mRNA 12119 15440 . + . ID=g5074.t1;Parent=g5074;Name=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 12119 12253 . + . ID=g5074.t1.exon1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 12119 12253 . + 0 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 12568 12767 . + . ID=g5074.t1.exon2;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 12568 12767 . + 0 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 12939 13041 . + . ID=g5074.t1.exon3;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 12939 13041 . + 1 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 13416 13529 . + . ID=g5074.t1.exon4;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 13416 13529 . + 0 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 13933 14090 . + . ID=g5074.t1.exon5;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 13933 14090 . + 0 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 14411 14514 . + . ID=g5074.t1.exon6;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 14411 14514 . + 1 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 14854 14973 . + . ID=g5074.t1.exon7;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 14854 14973 . + 2 ID=cds.g5074.t1;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 15313 15440 . + . ID=g5074.t1.exon8;Parent=g5074.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 15313 15440 . + 2 ID=cds.g5074.t1;Parent=g5074.t1 #PROT g5074.t1 g5074 MKQPTSKEQVEKVRTRVVLHADRVENTASSSFPGSYDGYDDAWNQATFERGFRVDVVSHSDELMEFDMVGVDASIANAIRRILIAEVPSMAIENVYIMNNTSIIQDEVLAHRLGLIPLKADPRRFEFRSESNGDPTDANTLVFKLKVKCERNPKAPADSTDPTERYTNSSVLSSHIVWEPKGSQAASFASDPIRPVYDGILIAKMRPGQEIDIEMHAEKGIGKEHAKWSPVGTASYRLLPEIILRRPITGDLADELAACFPKGVIAVDKGKGGDKVARVANSRLDTMSREVLRHPVLADAVELNRVRDHFLFSIESTGCMPPDALFAEAVKVLVNKCRVVRKALDELEGKTSA* # ORIGINAL: g5073.t1 original gene structure, not modified by PASA NODE_568_length_21106_cov_48.9253 AUGUSTUS gene 2330 10082 . + . ID=g5073;Name=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS mRNA 2330 10082 . + . ID=g5073.t1;Parent=g5073;Name=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 2330 2375 . + . ID=g5073.t1.exon1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 2330 2375 . + 0 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 2591 2745 . + . ID=g5073.t1.exon2;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 2591 2745 . + 2 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 2879 3018 . + . ID=g5073.t1.exon3;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 2879 3018 . + 0 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 3202 3446 . + . ID=g5073.t1.exon4;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 3202 3446 . + 1 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 3834 4818 . + . ID=g5073.t1.exon5;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 3834 4818 . + 2 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 5090 8202 . + . ID=g5073.t1.exon6;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 5090 8202 . + 1 ID=cds.g5073.t1;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS exon 8389 10082 . + . ID=g5073.t1.exon7;Parent=g5073.t1 NODE_568_length_21106_cov_48.9253 AUGUSTUS CDS 8389 10082 . + 2 ID=cds.g5073.t1;Parent=g5073.t1 #PROT g5073.t1 g5073 MADAQLSSLNAALATGVNLEVAYDGILRAFREDESDELADALASSGTQAALLQRWKASLQPIIALCNNAFQKGTPAHGNTGEVCASLRLLGFMSHHERLSDCISTDDALVLIDCLCKMASDHSSEKRAANLSLWCLSVQKFAPAAVSAKMRRLLETMDAIVTDPPLGSSTLVHEAMIVVQTLISRFPAEMQQHAPVWGAFCLPRLIDPIPKLREKSRDILRAGLPWLIHNGDAIARQVSEIARAAAGCRDASDLVHPSSLASPDSHVTLNALCDDNKMQQALDIWEILVPLLGEQLHRGSLINDLLKIPERAFVSQSPSVRAGAYTAWQSLVDNFAGASTGDVLCRPKRLALVLMPMRTQIRHEKHPSVIEALLRTWWHVVVCLGDKLPQAYADVLAPFFDATLGMTSGIQWSVEQIGLESAAKLLAVSMGPVVVDGLGSSGEVASSASSVTCVAPSRVPHTPTIGFSAAFSGSEKAGGNSNATGGGSVGAFGGAAVVTPPTPVTPSGARESLENLRTALPLVEIPIILDLSRRLTEYHTRALSGSGTDSCWLVRCWELLCDRIAVVASGVHVDMRKVSAISDDDNNTPHVRIVDTTRKQLSSVVAGVVSLLSSARRRPASGSYTESDSAAIESLYGVISAVTSRLSPSELFALRLFDLQLPSETARTTAATTTTTGTTTGGATQASTPHCSPVKHRQGAATAGSPLKKASSSPLKRASERGTTTSLFSAGPLSGVRPSLGACVFDALVSFPVAHMSHTERNALLRTIETLAHAGLHSLASAPDGLAHCLLFCKSLANALLAAQTDMNTTAIGGADAECVRERFILKAWTSVARSLRSFLLQTDCVALDALSLGSARTHRPDYRAVVSGIAFPAFATLYCTSRYWNALREETKAVVASDEGPDDATALALIRSCAKLSSQVYGAFSTITSARDAQTNASAAEVSHAISDTLWEWTSLCSSSSTASGAAVTRAIGPCSAPPTTYVEFTGDVAVAMIQAADFSKGEGHALSNIAPLVSLVAALSRECVTACDTLTHAGSVTRADAVADAVFNCWTILFSRVQHVTTLTLLVDACKDVLPALLSSPLGRARRSHVCFGAFVERFARIVGATLASFDAASLASVAPLLLCGLSHHRKDVRNDAVSLWNSTFGKRREISRDDIPEGLRPVILALHKEGAIVLPEKAALAFSGDGGNALADNKDVASTYKAETQLSQTHDDDIAEPFVSLVASGSPRKARASFIGRLADPVMASPRKSTPALLTPSVSSPVLSGRTASPAARKRPFSMDDSIDDSLFVRVASSAGKSSSDGKKRRLLTEKQRESRAAMTAVPTLYNALDKSQDPFAFADYASSHTQMESQSSSTSQPDSTAVTARTTATDADGHPRMIWNFTKSGAVDLCGGTDAVDAPVTVIGAECDHTGDVAMGGDAVNACLGNDDNWDSANPNAESHIDVLADDAMLHDDAGMTGNAMDTSAHAHHDESAVLFGQHSGDGVDSVGRMDAVDAGDAIDNATVCDGLRSPPPANVNGATSFANAFGFQSPPPCESKGDVDRAAGLVSPGILKRPQSEKSVSPKSRHVSFDLTSNRQFEIPRDGTSESTTDAVASDQQQQQQQQQEQQHLGAPPSPPKRDGVLRSGRFVLHADLLRRGNSPTIHSTVPEGLKRRFSADEDDQRPSKVIRLSTGDVPKTTDSPQQQQQQQLGTKVASSSTAPAFDEDAPFFPMLSNCARAIDQMSALAKPLRRILIGNGISTVGQLCQLTPRRLHGMNVRPWIDQMRRTMSTLSDAIAAESAKKVSVISIRQREELPDPTQPADRADHVADAETNAVRMSDGDDAESNAIASVHVTESSSDEAVADSVSFIGSDSATALIVGENNSGERLSGAVVCGVASSDPKSWAMFSPEGIPDSDESEQRERDDGAAGAMRSRIQRSLGPSMDAAVDDTHNLHTEQGRYGLGDNVHREEEVGGAAGECAESAASVDTVEMALREASQCIADVRRIDRELMHPDAVAEDTTVVEDVESNCIPANGSRLSVNDIALSTDDSDDTRQRTATSTTTTTATTTTTSTTAGLHGHSDGVSFASATDAFVGVLARASAMEDNIASLNASELISAQQQLALLMTKVVSALADRARSV* # ORIGINAL: g2814.t1 original gene structure, not modified by PASA NODE_6194_length_620_cov_86.4459_potentialcontaminant AUGUSTUS gene 60 169 . - . ID=g2814;Name=g2814.t1 NODE_6194_length_620_cov_86.4459_potentialcontaminant AUGUSTUS mRNA 60 169 . - . ID=g2814.t1;Parent=g2814;Name=g2814.t1 NODE_6194_length_620_cov_86.4459_potentialcontaminant AUGUSTUS exon 60 169 . - . ID=g2814.t1.exon1;Parent=g2814.t1 NODE_6194_length_620_cov_86.4459_potentialcontaminant AUGUSTUS CDS 60 169 . - 0 ID=cds.g2814.t1;Parent=g2814.t1 #PROT g2814.t1 g2814 MRYLILSVALAVAIAASAVSGAPASTKVIPNASTRG # PASA_UPDATE: g7022.t1, single gene model update, valid-1, status:[pasa:asmbl_10042,status:12], valid-1 NODE_936_length_15749_cov_46.8151 . gene 15090 15641 . - . ID=g7022;Name=g7022.t1 NODE_936_length_15749_cov_46.8151 . mRNA 15090 15641 . - . ID=g7022.t1;Parent=g7022;Name=g7022.t1 NODE_936_length_15749_cov_46.8151 . exon 15090 15641 . - . ID=g7022.t1.exon1;Parent=g7022.t1 NODE_936_length_15749_cov_46.8151 . CDS 15093 15641 . - 0 ID=cds.g7022.t1;Parent=g7022.t1 NODE_936_length_15749_cov_46.8151 . three_prime_UTR 15090 15092 . - . ID=g7022.t1.utr3p1;Parent=g7022.t1 #PROT g7022.t1 g7022 MLTRPLFSIHAPVKVIRRKPEEFKIACLQSVRSLFPADTTFNPFYAGFGNRITDAISYRSVGVPEKRIFTINPQGEVKLELISSFKTSYLKLGDLLDHMFPPINGRAAYARGEVDDSFNNFNFWRAPLPDLAGVVPTTAVSVAITNDASPEDAGAVSVGAPSLLHHSVSVPSLTSAAVAEHV* # PASA_UPDATE: g7018.t1, single gene model update, valid-1, status:[pasa:asmbl_10043,status:12], valid-1 NODE_936_length_15749_cov_46.8151 . gene 194 3331 . - . ID=g7018;Name=g7018.t1 NODE_936_length_15749_cov_46.8151 . mRNA 194 3331 . - . ID=g7018.t1;Parent=g7018;Name=g7018.t1 NODE_936_length_15749_cov_46.8151 . five_prime_UTR 3276 3331 . - . ID=g7018.t1.utr5p1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 2186 3331 . - . ID=g7018.t1.exon1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 2186 3275 . - 0 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 1691 1821 . - . ID=g7018.t1.exon2;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 1691 1821 . - 2 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 1322 1441 . - . ID=g7018.t1.exon3;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 1322 1441 . - 0 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 977 1072 . - . ID=g7018.t1.exon4;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 977 1072 . - 0 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 622 664 . - . ID=g7018.t1.exon5;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 622 664 . - 0 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . exon 194 475 . - . ID=g7018.t1.exon6;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . CDS 435 475 . - 2 ID=cds.g7018.t1;Parent=g7018.t1 NODE_936_length_15749_cov_46.8151 . three_prime_UTR 194 434 . - . ID=g7018.t1.utr3p1;Parent=g7018.t1 #PROT g7018.t1 g7018 MDPPKKLMEKRAREDDSASAYQSADESPSLPKRQKAADGIDGELRAVQSHHARAHAVNRQISLHELSWPPSSEELSAYVDTPVQRLPKMYKRELHNRVFVNRGLSLEKIQYFGFDMDYTLAQYNSAKSEALSYKLTVERLVAIGYPSEILAYKYDPDFPIRGLFFDKNFGNLLKVDSFGNILMGLHGKTELAHTEIQSLYPSKFVQADDIGRRYYVLNTLFNLPETCLYADLVDFFDNHKDYTRSNTGVHTTDLFLSYKNIFLDVRQSIDWVHNDGNLKATMTRNLPEYVEKDAHLPTLLDRMAKSGRKVFLATNSNYEYTEKIMTYLFDFPHGPDAGSPHRNWRTYFDIVIVDAQKPLFFAEGSILREVDEVTSSLKIGSVTGGFQKGKIYSGGSSEIFCKLTGAAGENILYIGDHIFGDILKSKKEQGWRTFLVVPELNAELQVWQRSRALYDHLENLQFMLAETYRGLDSHVLVAPRFPQWLATNVLCDAGQTLRGFVRGLLH* # ORIGINAL: g7021.t1 original gene structure, not modified by PASA NODE_936_length_15749_cov_46.8151 AUGUSTUS gene 11142 14060 . - . ID=g7021;Name=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS mRNA 11142 14060 . - . ID=g7021.t1;Parent=g7021;Name=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS exon 13753 14060 . - . ID=g7021.t1.exon1;Parent=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS CDS 13753 14060 . - 0 ID=cds.g7021.t1;Parent=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS exon 13304 13550 . - . ID=g7021.t1.exon2;Parent=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS CDS 13304 13550 . - 1 ID=cds.g7021.t1;Parent=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS exon 11142 13013 . - . ID=g7021.t1.exon3;Parent=g7021.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS CDS 11142 13013 . - 0 ID=cds.g7021.t1;Parent=g7021.t1 #PROT g7021.t1 g7021 MAASRSVPRGALPQHSAYPHGPSSDAAHDQTARSWHGDTSETNATNPEEGRSPSPHRQFSRASFSDSGYFDVDIDDGGEAEETEECFYPPVVLIHGFLGTGVWYWGWALGKDGSMMSPNTPHRVYVSEVGPLSSLHDRACELFYQLKGGTVDYGDAHSKACGHDRCGRTYAGSFQEWSADRPVHLCSTARVLQQLLVENAFEGYDTNSSWVRSVTTIFSPNMGAITPYLLGAHPTKDGVVSKFSFGWWGMKFTHVYEFLDSAFLRSRLVDFNLGHWHLPTWRDASSPLEALRLLAQSLKSPSPLITTADSAPHDMTIAGMAAWNKRTCIGHAGTMYLSFVGSHTFREERTGYHLPRLTSNPALFSMSAIIGTASLSMATNHLDSVLKQRREGIMRRASIVYGANELMALVGSEPSSCGAAQSSADGAAGSPPKRIRRTSFLRSASVVLAALEEEQQSHPHAETSGLVRGTSVSEENESAQSQSTSSGDSTAEGPSHATLLWRQKAILARNASVILKLMGAPKDTVLDRAASALAEEGNAPGGCSAPSSNSTHESAQKADAQEGKSSAASPWSMFGLAASMGSCAYSAAARVRDTVGRLARTSPAPKEREPAPTEESKVAEKGVVGDVPGDVHGPSYHAEDWWENDGVLSSHGQMHPHPDCSPRHCGHISLSTDELAHGFGRALFERHGHSVGAAHRAHVHVRAHNRGHGHNHTHLPNTKHAAHGEAAASKQPHAHTGQLGRGPSRDRPSAVMGRTGPFWRVIELRGLGHCDLVPFPREREVHKNFFEGLFLTLREFDEECHATRTGKL* # PASA_UPDATE: g7019.t1, single gene model update, valid-1, status:[pasa:asmbl_10041,status:12], valid-1 NODE_936_length_15749_cov_46.8151 . gene 3605 7968 . + . ID=g7019;Name=g7019.t1 NODE_936_length_15749_cov_46.8151 . mRNA 3605 7968 . + . ID=g7019.t1;Parent=g7019;Name=g7019.t1 NODE_936_length_15749_cov_46.8151 . five_prime_UTR 3605 3652 . + . ID=g7019.t1.utr5p1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 3605 3918 . + . ID=g7019.t1.exon1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 3653 3918 . + 0 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 4352 4470 . + . ID=g7019.t1.exon2;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 4352 4470 . + 1 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 4711 4774 . + . ID=g7019.t1.exon3;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 4711 4774 . + 2 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 5152 5179 . + . ID=g7019.t1.exon4;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 5152 5179 . + 1 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 5341 5416 . + . ID=g7019.t1.exon5;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 5341 5416 . + 0 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 5709 6079 . + . ID=g7019.t1.exon6;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 5709 6079 . + 2 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 6375 6768 . + . ID=g7019.t1.exon7;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 6375 6768 . + 0 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 6949 7553 . + . ID=g7019.t1.exon8;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . CDS 6949 7511 . + 2 ID=cds.g7019.t1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . exon 7855 7968 . + . ID=g7019.t1.exon9;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . three_prime_UTR 7512 7553 . + . ID=g7019.t1.utr3p1;Parent=g7019.t1 NODE_936_length_15749_cov_46.8151 . three_prime_UTR 7855 7968 . + . ID=g7019.t1.utr3p2;Parent=g7019.t1 #PROT g7019.t1 g7019 MFSAAATCWGGRLMRCGCARAVYAQRTLSTTARVLADGARKTQAASAPLSFSKRLFAGEVQTEKLFPFPNALDAEQHDTLKMLVEPVEKFFAERVDSKRIDKEAQIPKETMDGLKELGLFGLQIPQEYGGLGLSNTAYARVVEVISQDGSLAVTLMAHQSIGLKGILMFGNEAQKQKYLPRLASGEHVAAFALTEPSSGSDAGSIRTRATLSADGRHFLLNGSKIWISNGGIAEIFTVFARTIVVDPVTGDKKDKVTAFIVERAFGGLTNGKPEDKMGIKGSNTTEVYFENCPVPIENVLGDVGGGFKIAVNILNSGRYGLGAGAGGGSKNLLRLATEHASTRQQFGRPLKDFGLIQDKIAQMALSAYAIESMAYLTTGLIDNGEKDASVEAAMCKVYGSEAIWTNGNEALQILGGMGYMREYPFERIVRDSRILLIFEGTNEILRLFIALSGIQAPGERLKKLGAAAKAPWSNPGLLLKEAIARAQAIAKVDRPALPDAHTAVAKPAALLADATCRFRDAVDKALRVHGKGIIDQQLILRRMADVSIDLYAIAATVARSTRSLNQKSPTAEHEALLCNTLAAQTAPRINANIAGIVAPSTDDAVKKIAADIFGKGGYIPPHPLEI* # ORIGINAL: g7020.t1 original gene structure, not modified by PASA NODE_936_length_15749_cov_46.8151 AUGUSTUS gene 7864 9987 . - . ID=g7020;Name=g7020.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS mRNA 7864 9987 . - . ID=g7020.t1;Parent=g7020;Name=g7020.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS exon 7864 9987 . - . ID=g7020.t1.exon1;Parent=g7020.t1 NODE_936_length_15749_cov_46.8151 AUGUSTUS CDS 7864 9987 . - 0 ID=cds.g7020.t1;Parent=g7020.t1 #PROT g7020.t1 g7020 MCWRATWEYCKSAPACLLDARQTNARTSTFFGIGAVRADVPAASSSVTVGRGEVFHVGIQARDETGAVRTCGGDSFQIELRGPSLYVGHATDNLNGTYSFYAVLYDVGTYEIQARLDYRACEGMTHCLENTTKTIAIEWIGEQPPIGSDTIDMRTHRTTLTVVEPASPCAPDDCLQQLTGRNGAVSVAAQCRSALHYRCDTPAPDDPIYRRGRWKTVEAACASQYSPHSLSVFHGQSKESTLTAKEDSSPGSAGVSDGASAAMRDRCTRDSSSLRTNGLVWVPIDSGRALLPLECLRNKWVHSIGDSISWYLVDSLIHLLRRHSRDVEAICYYTRVDALMGTHTPFLVRDHSCRINGTAEIINGYRRFLSVAIIKELNFTVTRHWALRRCVGCAPTHPVHFTSFAPWTSTAFLAQLDSPRSTQLPPPYQSSQSPPVSVYPVPPSPLHEGSLGIGRTRRDAIEQPKLPRQENTVVKGSFGLRRSQPQTSTQGATYTNETRVRRHGRREQKQHLQRRRRESSQLHHLDPDDRVHSPEFLFPLRPGLLPTHVVVNSGLHHMSHSDHLDIAYGPYVTAMLREVIASFPPNGTHIIWRSTAQTQWPDRRLPFQHKCRTPYRITYANEVAAKAIASLRDEFGHQVPVSILDYFQVSLGRPDSAPDNRHYNDDVQIVVIDELLHLLCRCAMAPSDMGHMGLKSPPRQCTHDDLA* # ORIGINAL: g3832.t1 original gene structure, not modified by PASA NODE_3536_length_3250_cov_40.6104 AUGUSTUS gene 274 2547 . - . ID=g3832;Name=g3832.t1 NODE_3536_length_3250_cov_40.6104 AUGUSTUS mRNA 274 2547 . - . ID=g3832.t1;Parent=g3832;Name=g3832.t1 NODE_3536_length_3250_cov_40.6104 AUGUSTUS exon 1127 2547 . - . ID=g3832.t1.exon1;Parent=g3832.t1 NODE_3536_length_3250_cov_40.6104 AUGUSTUS CDS 1127 2547 . - 0 ID=cds.g3832.t1;Parent=g3832.t1 NODE_3536_length_3250_cov_40.6104 AUGUSTUS exon 274 913 . - . ID=g3832.t1.exon2;Parent=g3832.t1 NODE_3536_length_3250_cov_40.6104 AUGUSTUS CDS 274 913 . - 1 ID=cds.g3832.t1;Parent=g3832.t1 #PROT g3832.t1 g3832 MLSSQRRISVDVERGSGGHVAKGPTDDPSLPCYDDAVRHVSLSSRSFQSRRCCSRGLIEVVVCAALVLCITTVIVRRQAGSLPFSAVFSGDAILIMDYKAGASSDGNRHEISADKFSPKGMQRAYSHDDITDTSDASDVELDDTYILSNGGEDVDDVEGVEEGQFDAVAQNEPADDIGDDELWDQSLSLKNEDTANVDVTHGGPSDVSDLDLVDGSDTDDEYVLPGSVHVDESKTLPSRRVVIALAAAVRSKKERLGLIRTLTLSLRQVNSDCDLFILVDSDDGTKVHAVRRAAPDEAVSDETGEFAPGDAFELGEDDGGGDEDREEGAATEGPRLNIDHNGDGVANGEDPGITALLNEATFDTAYFSRLRQIPLPWRNMPPALYRYALFDSFLVSARGIYGAVALVDVTEGVAFQRDPFAMTISDEWNGKRLLHTFEAPVTLGDTGAGAWLRECHTQVAQGISAETVKLMKGRLLLSDVVVGDFESIHNYVKSMVAEIRALANAEAQGHVPVGGRSPACTLKDASGDGIALHDAIHNAVLRQRASSAAAASSAKASKDAGPRPGDRAREQPLPPTFAFQPTVERVKLIPVSFFGDGFRMQRLLNASVSLRNHLEEQLADPDSPAPARAATDANAHPTAWLPIYSEVTALPFTIVYGFRNNKLLLSAFEQLYAPAVPRSEDYEQDP* # PASA_UPDATE: g4710.t1, single gene model update, valid-1, status:[pasa:asmbl_211,status:12], valid-1 NODE_1055_length_14382_cov_40.8424 . gene 2 2223 . + . ID=g4710;Name=g4710.t1 NODE_1055_length_14382_cov_40.8424 . mRNA 2 2223 . + . ID=g4710.t1;Parent=g4710;Name=g4710.t1 NODE_1055_length_14382_cov_40.8424 . five_prime_UTR 2 3 . + . ID=g4710.t1.utr5p1;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . exon 2 415 . + . ID=g4710.t1.exon1;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . CDS 4 415 . + 0 ID=cds.g4710.t1;Parent=g4710.t1;5_prime_partial=true NODE_1055_length_14382_cov_40.8424 . exon 820 1030 . + . ID=g4710.t1.exon2;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . CDS 820 1030 . + 2 ID=cds.g4710.t1;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . exon 1342 2223 . + . ID=g4710.t1.exon3;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . CDS 1342 1834 . + 1 ID=cds.g4710.t1;Parent=g4710.t1 NODE_1055_length_14382_cov_40.8424 . three_prime_UTR 1835 2223 . + . ID=g4710.t1.utr3p1;Parent=g4710.t1 #PROT g4710.t1 g4710 HRSHIFAIRPVPTNIAAGSKIHNLNVKGKRGNIVQVFPGVEYDFVPTRLHITTGHYVHPQWTGSNTNPNENAGQGKEGTDRSNMILTRYKKFTEIGEELYQKPNFGDYGTNYPSKIDELPFLGFSYKDVYRLAILRDAQFGGEMSELDDAGTYFDLGVRQVNARGVYHYMCTRNNNFSNRDQKGTIIVSDRTVSSSFVGWMGATIKAAEEGVWLIVPQGAMTKPASFQVTTVYKSDAEAGFPSTSSLVQVQPLSFEHDPSNPTLLVIPFKKGMLEDITAYRVDDIATGAGLAKAEASISGGSLIVNTNGQGGTYYAKTSVNGGKVAGIVIGCLAFVGIAVGSVVYFRKNPESWDNVKKKVTYIKRSFESKV* # ORIGINAL: g4713.t1 original gene structure, not modified by PASA NODE_1055_length_14382_cov_40.8424 AUGUSTUS gene 10111 11514 . + . ID=g4713;Name=g4713.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS mRNA 10111 11514 . + . ID=g4713.t1;Parent=g4713;Name=g4713.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 10111 11514 . + . ID=g4713.t1.exon1;Parent=g4713.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 10111 11514 . + 0 ID=cds.g4713.t1;Parent=g4713.t1 #PROT g4713.t1 g4713 MARRCTGLVHVAAASGNHQNAVELGPVLARADGGKKRTAQDAALEVLSRGRGPRRATGNISAPASGKRITVEGTQGSTAERAAFQSTLDKKLEVDKRVQARARLMFNLMMAKLALPSPPSTAPTCASTGNHDGGDPTPIVTRESLEMFYALLMEPSAGIGYAPHTAAQYGWHLMNAVDESCISPSLRHGRSRARYDALTSAKKMCARDYIPEVEAHLTEKSVRNMCKSFAMALVNNAAIVRECARSIEQAMGDARNQQISVPKKFEMTVARALATVEKMTERFGGNCGLDLAEVGVINSYDYLLASDQRMRYVQRWTSRLRKWTAPLKRLRALPRDSALSMWACTAFALLASAAVATIGNVSHEVFESVNTASGKLVKRRQLTVLFRKTKNSRGRLVSFRKISDDPAVSGTAAEAESLGGVAAKWKSMCPYSSLALVVELHGFVLPAPSATTPAGEQAVERMPTCGH* # ORIGINAL: g4711.t1 original gene structure, not modified by PASA NODE_1055_length_14382_cov_40.8424 AUGUSTUS gene 2798 7619 . - . ID=g4711;Name=g4711.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS mRNA 2798 7619 . - . ID=g4711.t1;Parent=g4711;Name=g4711.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 6306 7619 . - . ID=g4711.t1.exon1;Parent=g4711.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 6306 7619 . - 0 ID=cds.g4711.t1;Parent=g4711.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 2798 6076 . - . ID=g4711.t1.exon2;Parent=g4711.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 2798 6076 . - 0 ID=cds.g4711.t1;Parent=g4711.t1 #PROT g4711.t1 g4711 MGQNAAFSPITTATALATTILPADDGDVACTQQCPSAAMPEGCEVVSAPGGSTSIKNSIGVNASTDLTVSSCVALSSGTHTYHYINIVSGGILWFVDDGGVIDLRVSSLVIEQGGRAVAGQWCKPFGCGGGKLNVWLWGDDPTAQGSINAAAAGIQCASQGGCYPPESAINKFCCNGVDSTSPCAGPDVCATAEQNSAFEGYSPLPFDGDGNLFGFKVLAVSYGGSLELFGRKGVAARYFTDPESPQRLSQAAGGCETPDDQYSSESWAQLSGESWARLGSTARAGATVLTLDRTVAWKAGDQVVISTTDWHASHSELVTVANDVTPESATVTITAPLAYDHYGELTTVDEMLAAQAHNPNRDIDTRAAVGLLTRSITVRSLGATASDPFPEAAACGASAGAAAEATDPNCYFGGHTIARQGFARYHVQGVEFHQLGQDSSYTNAFIADSSSWDSMTRFFVIHGTHGVTVTRSVGFLSVGHGYYLEDASEINNRVCHNLAVSLRAPLLTYLRAQSPNSPTFRLVPGILPSVTVAGETIIQGGDDYEPVGYWVMNAHNDIVGNMAAGVHGFGSCFWLLGSELSGPSKALLWASKTSTSKDYAQWHRVAGRISPIKRFRGNSCSTSYNALQTAIDIFPASVADTGFGGGSSRDSVPHPRSYAVPVDMLPRVTQNFQPTRFSTDATYQINDAVTCVKSSLYRSPPFPGSDDHYRNPLLCSAAVIDRFRTSFNYAEENFAAIWLRGYWFLFSNGAVTDQLFGGLGFVTGGSWLDAPPGFWMLTSGSVYVGRTQTDSVYANFTGPSIDETLCGGNTCPLPADGTAIAAVGFNYGRSLTIYDGPFFSDGSVFMRSPNFSCDASLTTIGGSECGAYRMTNQPQDRSSEGDGSSGTRMVVTSAGIGWKQPNGFYYPPAFVFRRSAFDNVTLRHTVVDITQPYLFSGPLSAPRPAGLSLFDSVRPIDSSTILIDEDGTLTGVVNPHGTTRRTSSLSSNTFFNSPPQVPECRSFGVQTAPFEMLTTVVSMARQSEELPSAWRTDLGWAFIDPNIPQPTTPSNLYSTYPFVPIYRQRLLPNDTLCRANICDGVDENNGMFSCTHASMMAGSQTWSAPYLTMDQMTYFIDTSAQPLSGPVCSRFTDNFREETLFSGGDSYVLYQLYPQKTSKVTYQLYVGAGFDVTTMGFFGRIFPTQYLDTNNKQQAIIRAEAYPGNASVADGVLTITLDNAPIASDFDFAANDEFTKCLPRDVCEPSLSSAGGGCIVSRNVTDPQLRQSLLEVCAYWVTRAGGSTADAGSTVADCPHNGCLAYVFTLPVGFASRPYAEVGLPLAIDFACQDAPWNTPLVRANTTTANDCGATRAGFCETVFRDADRDGFGDGRFPARAFAVPQGYVHNAGDCDDADAGIHPGATEVCHNGQDDDCNGSIDDGTCAESTFMATTTFTAVLTPVGETTTEESPPIPTACSTTAESNRRRDVFADELHESPADEKKTTALIAVAIGTTVSVAVATTLVGAAVYVNVAVSRRLRVRLNTKPVPV* # ORIGINAL: g4715.t1 original gene structure, not modified by PASA NODE_1055_length_14382_cov_40.8424 AUGUSTUS gene 12318 12581 . + . ID=g4715;Name=g4715.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS mRNA 12318 12581 . + . ID=g4715.t1;Parent=g4715;Name=g4715.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 12318 12581 . + . ID=g4715.t1.exon1;Parent=g4715.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 12318 12581 . + 0 ID=cds.g4715.t1;Parent=g4715.t1 #PROT g4715.t1 g4715 MEVDGDGGSADAMSRLPEEENYWNVGELSTLMPLLSADGRPNASVAGAAVDRRRLFTDELDVLFSTLATGGSDVAGSDGNDDDDDDD* # ORIGINAL: g4712.t1 original gene structure, not modified by PASA NODE_1055_length_14382_cov_40.8424 AUGUSTUS gene 9207 10077 . + . ID=g4712;Name=g4712.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS mRNA 9207 10077 . + . ID=g4712.t1;Parent=g4712;Name=g4712.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 9207 9686 . + . ID=g4712.t1.exon1;Parent=g4712.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 9207 9686 . + 0 ID=cds.g4712.t1;Parent=g4712.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 9784 10077 . + . ID=g4712.t1.exon2;Parent=g4712.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 9784 10077 . + 0 ID=cds.g4712.t1;Parent=g4712.t1 #PROT g4712.t1 g4712 MLSRVDIAGAMKQPALMFMQLEQYANLAGMHAEWMPIIGALQQSALQDPNEDNSDEANDAFANFQQLIELQSRCACTVTDVGKGQSSLFRVRESTCKALVKSLEARIASGRAKRLVGLFVRAIGSAGWCVNAAAAGLHGQLTAAEIIADSEWAELCASFAFGGGPAQFADLHAAFLTVGLYYHGGDSSLLASAATAQRSDGVSGDTDDPSNNDDDDECDTAALAAAALKKLAEGPAREPQEQEQQQQPQRSTFLQRI* # ORIGINAL: g4714.t1 original gene structure, not modified by PASA NODE_1055_length_14382_cov_40.8424 AUGUSTUS gene 11795 12244 . + . ID=g4714;Name=g4714.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS mRNA 11795 12244 . + . ID=g4714.t1;Parent=g4714;Name=g4714.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS exon 11795 12244 . + . ID=g4714.t1.exon1;Parent=g4714.t1 NODE_1055_length_14382_cov_40.8424 AUGUSTUS CDS 11795 12244 . + 0 ID=cds.g4714.t1;Parent=g4714.t1 #PROT g4714.t1 g4714 MRFRLACTAATLALGWQYMSIVAILHYLAGSGLQIFADADLDRELTDGGSMRVQMAPDREETSALELVHWLVYREWEELRPPCAWPEVPEGCLSMSGVREERTTNRKAVVAAAREKIEPQPQVPASVLAKYDPGTRNQLRAEQGIGFPV* # ORIGINAL: g1825.t1 original gene structure, not modified by PASA NODE_3855_length_2621_cov_35.4764 AUGUSTUS gene 1455 1793 . - . ID=g1825;Name=g1825.t1 NODE_3855_length_2621_cov_35.4764 AUGUSTUS mRNA 1455 1793 . - . ID=g1825.t1;Parent=g1825;Name=g1825.t1 NODE_3855_length_2621_cov_35.4764 AUGUSTUS exon 1455 1793 . - . ID=g1825.t1.exon1;Parent=g1825.t1 NODE_3855_length_2621_cov_35.4764 AUGUSTUS CDS 1455 1793 . - 0 ID=cds.g1825.t1;Parent=g1825.t1 #PROT g1825.t1 g1825 MCFLCKQDEEARKRQQSAAAQKRTTPPPHLSGIQETSSIGVPASPAKSAQSSADSSLSSSLASSPTETSLGLSAAFALAATQGDAYAEKDAAVTKTRVKFEFTPVFYDAPLV* # ORIGINAL: g2232.t1 original gene structure, not modified by PASA NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS gene 1274 2690 . - . ID=g2232;Name=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS mRNA 1274 2690 . - . ID=g2232.t1;Parent=g2232;Name=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS exon 2393 2690 . - . ID=g2232.t1.exon1;Parent=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS CDS 2393 2690 . - 0 ID=cds.g2232.t1;Parent=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS exon 1759 1940 . - . ID=g2232.t1.exon2;Parent=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS CDS 1759 1940 . - 2 ID=cds.g2232.t1;Parent=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS exon 1274 1369 . - . ID=g2232.t1.exon3;Parent=g2232.t1 NODE_3620_length_3102_cov_33.2445_potentialcontaminant AUGUSTUS CDS 1274 1369 . - 0 ID=cds.g2232.t1;Parent=g2232.t1 #PROT g2232.t1 g2232 MKMLMSGQKAKLGMAAGEIFNSDLIGLMPGSTVPTCRNSPVNVRRPSLSEYVLLMRRKAAVVTPKDCATIVSLLDIDPGMTVLEAGTGSGSLTLYLARAVGPSGTVLSFDASAEHQEQAKKNILGWQRERPHTLGDVRMALRDVSAPDSLKDVPDNSVDGIVLDLTAPEAVLPNVTSKLRQGRPLVLYICK* # ORIGINAL: g10552.t1 original gene structure, not modified by PASA NODE_670_length_19278_cov_42.2377 AUGUSTUS gene 3085 8563 . - . ID=g10552;Name=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS mRNA 3085 8563 . - . ID=g10552.t1;Parent=g10552;Name=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 8405 8563 . - . ID=g10552.t1.exon1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 8405 8563 . - 0 ID=cds.g10552.t1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 7610 8176 . - . ID=g10552.t1.exon2;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 7610 8176 . - 0 ID=cds.g10552.t1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 7375 7438 . - . ID=g10552.t1.exon3;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 7375 7438 . - 0 ID=cds.g10552.t1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 7029 7200 . - . ID=g10552.t1.exon4;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 7029 7200 . - 2 ID=cds.g10552.t1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 3898 6883 . - . ID=g10552.t1.exon5;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 3898 6883 . - 1 ID=cds.g10552.t1;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 3085 3381 . - . ID=g10552.t1.exon6;Parent=g10552.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 3085 3381 . - 0 ID=cds.g10552.t1;Parent=g10552.t1 #PROT g10552.t1 g10552 MDLSREFASKFANRSGSSSSLLGGKSPAGGKPAMQRRSSTSNMESSFEEFMNEPDSDDDDKPKVKKPWLERIREKQEKEKKKKEKKYWWMGGGEQGNPSAGGEGAAGAEAEADGGASKWLKKDPAPSEAPPQEQQQPGRPPADPQPAAIRVAVVPTSTSAALQKALSLSSTQTLASSRLPVTRIPTASDVVNAEGAVVGGAAAYGGTQGTASGASTASSVPLAKQSPVLVAALTPGSRGSLGVSAASAGSAVDSAQSSGSVDSGGDSLNSSRRSARRSLQFDDATISAAAAAASAKKDPKDFLRDLDECESDFDRSKELGRSQGALANATDVDEEDAIPNEKIVLRGQPRPASASDSSARSDDDDVSFSRDSLDGTSARSIASRIAALAGAKSGAGKGAAARMEGTLDSLALSSFGDDTRDFGEKGKGNDKGRAAVATKDAKVPAHAAASLIRKDDVATTKQFPRAADAARDLSETEGRPSSREHSDDESGAEERRDERGGRSDSDGEGNSSHSEKTSLSRRSRRSEVSIEELAGDTRKRIHISKPHSASEDSDSADSARDATATEKKGGKGAASGGNGAPQSPVDALIAESRKWRMEIMGDEDDGEHSTNAKQGHASPLFPAHHHASGGAGGPPGRGGRGVGRGGSKSDRSPASRGMLQAKGGPSSGTKMQGSGHGVARGGDGGVNKDTLALAAESFAGYLSDLLRGGTQSTPHKYGRAPSKGSGGEDWQALYEAEHVVVRKMMLERDALQREHTEAIHRLTGERDANVRRLAEENEALTKRLEDVSDPVKRLRASHAGALPRKASAAHNDNDNFGSDGETIERLRERMVEQDKLLAGYQLENERAVAQARESRALARETERRAYAEKRQLEEEVGRAREEALRVGDRLLTAGTITDERAMEFQRRIDNLDTAVRQAQEELATANKKHAAEVAAMKVSRRAQVDDLNARLKWYADNQEELARADADIRAKDDELARLRSELEMLRMRRQQSDAIANANSMADDSGDTPLREGKGKSAEAARRTARAQANAGSRAVADTKRIRELEHQVIELEDALHKRYPNSIPALIRATKACGTETAAVRFWEETAQRLEGELASQSASAHRAIRALQQKHNNMRTNYELRIRELETRIDAAVPETAVTDQQRLKEQQILSKRIRDLERELDDARSRKESEGLSAAGGGSAHVTAAALHRPTSPHRHHHPAEHSQIRSTDADMDAMRDALHLAEGECSEMERRANHAESLVARLERDARDVSAAHEREKTALQSQVAQLSATVESLHESLRVLGARVGSGDVGAVRRIEILEAALADARQSQSPAMHHLDKLCAQVRDLEERLARREIAMRLAVQQTEEKWRRALAEKNAALARCNAEIEGMVVVLTDLKRQGIVLLPTQQHKQQQQQLHPGKRHYRQDAPA* # ORIGINAL: g10551.t1 original gene structure, not modified by PASA NODE_670_length_19278_cov_42.2377 AUGUSTUS gene 880 2293 . + . ID=g10551;Name=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS mRNA 880 2293 . + . ID=g10551.t1;Parent=g10551;Name=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 880 961 . + . ID=g10551.t1.exon1;Parent=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 880 961 . + 0 ID=cds.g10551.t1;Parent=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 1537 1767 . + . ID=g10551.t1.exon2;Parent=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 1537 1767 . + 2 ID=cds.g10551.t1;Parent=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 2112 2293 . + . ID=g10551.t1.exon3;Parent=g10551.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 2112 2293 . + 2 ID=cds.g10551.t1;Parent=g10551.t1 #PROT g10551.t1 g10551 MGAGVNASSMWRALLLLYLTVTATVIAVESIASKHSVESITSIASEYSVESVASIASKYSVESIASEVSVESARARARATSVPPPPPRFDPDAGGTIEEESVGSVGLNSGLWFLVILVASAVCVGGFWYYRRKVCGVVQPWRSFSWDSCAVRAARASRMYLGST* # ORIGINAL: g10550.t1 original gene structure, not modified by PASA NODE_670_length_19278_cov_42.2377 AUGUSTUS gene 208 298 . - . ID=g10550;Name=g10550.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS mRNA 208 298 . - . ID=g10550.t1;Parent=g10550;Name=g10550.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 208 298 . - . ID=g10550.t1.exon1;Parent=g10550.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 208 298 . - 0 ID=cds.g10550.t1;Parent=g10550.t1 #PROT g10550.t1 g10550 MGGWASKSKKGEGNLTDEAAYNLHFKILLL # ORIGINAL: g10556.t1 original gene structure, not modified by PASA NODE_670_length_19278_cov_42.2377 AUGUSTUS gene 16199 18916 . + . ID=g10556;Name=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS mRNA 16199 18916 . + . ID=g10556.t1;Parent=g10556;Name=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 16199 16374 . + . ID=g10556.t1.exon1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 16199 16374 . + 0 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 16779 16971 . + . ID=g10556.t1.exon2;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 16779 16971 . + 1 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 17213 17308 . + . ID=g10556.t1.exon3;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 17213 17308 . + 0 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 17568 17642 . + . ID=g10556.t1.exon4;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 17568 17642 . + 0 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 18036 18062 . + . ID=g10556.t1.exon5;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 18036 18062 . + 0 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 18397 18544 . + . ID=g10556.t1.exon6;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 18397 18544 . + 0 ID=cds.g10556.t1;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 18864 18916 . + . ID=g10556.t1.exon7;Parent=g10556.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 18864 18916 . + 2 ID=cds.g10556.t1;Parent=g10556.t1 #PROT g10556.t1 g10556 MGFCKPYILRSLRDWAVVKDAAGKECATDHFRAVTCKASVITRVLSKHKYVIVFTPPDIRPPLVVAVGRDADDIERQWRFVCSDVAPRFDGDPEALDSVPSYIESLRRAAGDARKGGESPNLGERRIGAYRVMSTLGYGSFSHVVLAVHSKTNQKVAIKMISTSVEENVEMARKEIALLQGLHHPNIVEVFEVVETGPWLCVVMQHLPRGDLLEHLNECWKPSFSDADGRRIFARICLGVQYIHDNGIAHRGEPL* # PASA_UPDATE: g10553.t1, single gene model update, valid-1, status:[pasa:asmbl_8788,status:12], valid-1 NODE_670_length_19278_cov_42.2377 . gene 9147 10708 . - . ID=g10553;Name=g10553.t1 NODE_670_length_19278_cov_42.2377 . mRNA 9147 10708 . - . ID=g10553.t1;Parent=g10553;Name=g10553.t1 NODE_670_length_19278_cov_42.2377 . five_prime_UTR 10692 10708 . - . ID=g10553.t1.utr5p1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . exon 10509 10708 . - . ID=g10553.t1.exon1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . CDS 10509 10691 . - 0 ID=cds.g10553.t1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . exon 10196 10333 . - . ID=g10553.t1.exon2;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . CDS 10196 10333 . - 0 ID=cds.g10553.t1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . exon 9900 10065 . - . ID=g10553.t1.exon3;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . CDS 9900 10065 . - 0 ID=cds.g10553.t1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . exon 9147 9526 . - . ID=g10553.t1.exon4;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . CDS 9435 9526 . - 2 ID=cds.g10553.t1;Parent=g10553.t1 NODE_670_length_19278_cov_42.2377 . three_prime_UTR 9147 9434 . - . ID=g10553.t1.utr3p1;Parent=g10553.t1 #PROT g10553.t1 g10553 MTPSKSIWCTSRKRCLRFISRFYLLEIHSKMLRAAVVSSGVRRVLTPYASPRIISASYHEKVIDHYRNPRNVGSLDKNAEDVGTGFVGAPACGDVMKLQIRVDANGKITDAKFKTFGCGSAIASSSLVTVMLMGKSIEEARKITNVEIAKELSLPPVKLHCSMLAQDAIQAAVADFSKKSAKKASEPTAAVA* # PASA_UPDATE: g10554.t1, single gene model update, valid-1, status:[pasa:asmbl_8789,status:3], valid-1 NODE_670_length_19278_cov_42.2377 . gene 11251 13691 . + . ID=g10554;Name=g10554.t1 NODE_670_length_19278_cov_42.2377 . mRNA 11251 13691 . + . ID=g10554.t1;Parent=g10554;Name=g10554.t1 NODE_670_length_19278_cov_42.2377 . five_prime_UTR 11251 11540 . + . ID=g10554.t1.utr5p1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . exon 11251 11647 . + . ID=g10554.t1.exon1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . CDS 11541 11647 . + 0 ID=cds.g10554.t1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . exon 11799 11880 . + . ID=g10554.t1.exon2;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . CDS 11799 11880 . + 1 ID=cds.g10554.t1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . exon 12036 12443 . + . ID=g10554.t1.exon3;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . CDS 12036 12443 . + 0 ID=cds.g10554.t1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . exon 12610 13691 . + . ID=g10554.t1.exon4;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . CDS 12610 13221 . + 0 ID=cds.g10554.t1;Parent=g10554.t1 NODE_670_length_19278_cov_42.2377 . three_prime_UTR 13222 13691 . + . ID=g10554.t1.utr3p1;Parent=g10554.t1 #PROT g10554.t1 g10554 MAAMAIKHQDTYTFASEPRAVQPQRRKYRETAGPGQQTGVYGNIMYDRRIVRGNTYASAVLPAAAQPDPVELQRQQEARRRAVARRRAAEQLRPRTPEAVDGRKHMDVQTELYLEEISDRTPEADADTQTDAFIDRPPSPLFVPAKTGVDVATQIEDGDLFDFDVEVRPILEVLVGKTIEQALMEVMEEEELANLRHHQREFEQIRNSELAETQRLEEQERRRKEEKDRRLQQQRAVLQKETETSDKVAARAFAQSYLADLVPSVFENLQDNGYFYDSVEREVELQFMPWLSDHTERNLSRTLVARAMLDTLLRNAVTRHAATYSRFDIIESDPEPVEEQVEPSHEHTADAEGHAPTEDAEAIPVPTMGDVSLDGGAEDITIGGDEPADDGAAFHGDDADDA* # ORIGINAL: g10555.t1 original gene structure, not modified by PASA NODE_670_length_19278_cov_42.2377 AUGUSTUS gene 13874 15382 . - . ID=g10555;Name=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS mRNA 13874 15382 . - . ID=g10555.t1;Parent=g10555;Name=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 15108 15382 . - . ID=g10555.t1.exon1;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 15108 15382 . - 0 ID=cds.g10555.t1;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 14770 14926 . - . ID=g10555.t1.exon2;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 14770 14926 . - 1 ID=cds.g10555.t1;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 14256 14383 . - . ID=g10555.t1.exon3;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 14256 14383 . - 0 ID=cds.g10555.t1;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS exon 13874 14000 . - . ID=g10555.t1.exon4;Parent=g10555.t1 NODE_670_length_19278_cov_42.2377 AUGUSTUS CDS 13874 14000 . - 1 ID=cds.g10555.t1;Parent=g10555.t1 #PROT g10555.t1 g10555 MRGVMSYITSTMGQKAFAAAAERNRGPIAEVLSRLFAAKLPASITAVGGLEKAPLDVLEVSSGTGQHVSHFAKEMPHTRWQPTDYSDAQFDSIRAYINEASLPNVRDPVKVDASAPDDWPFADASFDAIVNINMVHIAPFQACEGLLKGAGRVLRSGGLLVMYGPYMIDGVISPQSNVEFDAWLKAQNPSYGLRDLTSLKALALQSGLSFVDAIAMPANNFTVVYSKK* # PASA_UPDATE: g1702.t1, single gene model update, valid-1, status:[pasa:asmbl_4658,status:12], valid-1 NODE_2614_length_5658_cov_38.3004 . gene 84 1283 . + . ID=g1702;Name=g1702.t1 NODE_2614_length_5658_cov_38.3004 . mRNA 84 1283 . + . ID=g1702.t1;Parent=g1702;Name=g1702.t1 NODE_2614_length_5658_cov_38.3004 . exon 84 1283 . + . ID=g1702.t1.exon1;Parent=g1702.t1 NODE_2614_length_5658_cov_38.3004 . CDS 84 797 . + 0 ID=cds.g1702.t1;Parent=g1702.t1;5_prime_partial=true NODE_2614_length_5658_cov_38.3004 . three_prime_UTR 798 1283 . + . ID=g1702.t1.utr3p1;Parent=g1702.t1 #PROT g1702.t1 g1702 QDEYNTWTAIIAGCSTLDEPLPDEKELYRQLTLTNTQMAMAELAPDSATKFLNKFLAGTDIAKNAADGVALEATSVVPVPSESREPSFGPLGMGVAAGALSHVLEKRLQRSRGSSNDRKDTLEAVVVDIDELLASIGTNFTPIAVPDEAAPSSSIDKNAWVPRGRTSSDSAPVPKSVTTLCAHTGDEQDELGFEKGQTLRAVAVVDADWYLCRLDERVGIVPRCFVTDIATVKERAE* # ORIGINAL: g1703.t1 original gene structure, not modified by PASA NODE_2614_length_5658_cov_38.3004 AUGUSTUS gene 1377 4642 . - . ID=g1703;Name=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS mRNA 1377 4642 . - . ID=g1703.t1;Parent=g1703;Name=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 4516 4642 . - . ID=g1703.t1.exon1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 4516 4642 . - 2 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 4199 4352 . - . ID=g1703.t1.exon2;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 4199 4352 . - 1 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 3680 3916 . - . ID=g1703.t1.exon3;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 3680 3916 . - 0 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 3426 3502 . - . ID=g1703.t1.exon4;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 3426 3502 . - 0 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 3013 3111 . - . ID=g1703.t1.exon5;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 3013 3111 . - 1 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 2517 2679 . - . ID=g1703.t1.exon6;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 2517 2679 . - 1 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 1975 2221 . - . ID=g1703.t1.exon7;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 1975 2221 . - 0 ID=cds.g1703.t1;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS exon 1377 1477 . - . ID=g1703.t1.exon8;Parent=g1703.t1 NODE_2614_length_5658_cov_38.3004 AUGUSTUS CDS 1377 1477 . - 2 ID=cds.g1703.t1;Parent=g1703.t1 #PROT g1703.t1 g1703 VDIAVGTPGRLDDLITSGKLDLSRVLFFVLDEADGLLAQGHKELVTKLHAKIPKQSPDGRRLQMIVCSATLHSNDVRAMADKLMHFPTWVDLKGMDVVPDTVHHVVYQVDPAASDAQNAQRAVAPNNAKYRTDGVHSRDNLSSGSPEARSEALKAVKPRLLLAMLQAHKFEQALIFCRTKVDCDNLRDFLLAAGGGQRAMVNEFSCACLHSDLPPPERKKNLDDFKEGAIRFLICTDVAARGIDVSGLPLVINMTLPDKPEDYIHRIGRVGRADRMGLAISFVSKVPEKVWYHSCPSKGKTCTNTKLKEEGGCAIWYDEPQYLSDIEAKVGETITRMAADMKVPVSEIGGKVVYGEKRGRSAGEAYKGHADILEPAAAELAELEFQAQTAYWDLRTRVWR* # ORIGINAL: g8038.t1 original gene structure, not modified by PASA NODE_564_length_21132_cov_47.1876 AUGUSTUS gene 4267 4854 . - . ID=g8038;Name=g8038.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS mRNA 4267 4854 . - . ID=g8038.t1;Parent=g8038;Name=g8038.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 4267 4854 . - . ID=g8038.t1.exon1;Parent=g8038.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 4267 4854 . - 0 ID=cds.g8038.t1;Parent=g8038.t1 #PROT g8038.t1 g8038 MATMYDLRAYPISVGDGDVRGPYRQLQHDGRNVTYQVDISRTFHDTMHTSYIDDCARDETRRYSIPVDFKLRSGSAARSMKTPPTAPRASPAGVPATLIVCHFCERPVDSVSSMCGRCGFNHNGDKKYVNVVNGDSLRDLVSRSRAASGSSTLQTPDIISQENHSAVAFSEAYSPDSLSDDEGPGDHLQFDMEME* # PASA_UPDATE: g8042.t1, single gene model update, valid-1, status:[pasa:asmbl_8211,status:3], valid-1 NODE_564_length_21132_cov_47.1876 . gene 19507 20676 . - . ID=g8042;Name=g8042.t1 NODE_564_length_21132_cov_47.1876 . mRNA 19507 20676 . - . ID=g8042.t1;Parent=g8042;Name=g8042.t1 NODE_564_length_21132_cov_47.1876 . five_prime_UTR 20584 20676 . - . ID=g8042.t1.utr5p1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . exon 20483 20676 . - . ID=g8042.t1.exon1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . CDS 20483 20583 . - 0 ID=cds.g8042.t1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . exon 20287 20378 . - . ID=g8042.t1.exon2;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . CDS 20287 20378 . - 1 ID=cds.g8042.t1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . exon 20048 20167 . - . ID=g8042.t1.exon3;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . CDS 20048 20167 . - 2 ID=cds.g8042.t1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . exon 19881 19951 . - . ID=g8042.t1.exon4;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . CDS 19881 19951 . - 2 ID=cds.g8042.t1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . exon 19507 19683 . - . ID=g8042.t1.exon5;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . CDS 19627 19683 . - 0 ID=cds.g8042.t1;Parent=g8042.t1 NODE_564_length_21132_cov_47.1876 . three_prime_UTR 19507 19626 . - . ID=g8042.t1.utr3p1;Parent=g8042.t1 #PROT g8042.t1 g8042 MAACAPALRVLRLTESAKLPTRATPASAGYDLYSAADLSIPPKGKALVPTDITIGLPDGCYGRIAPRSSLAWKNFVDVGAGVIDADYRGAVGVVLYNFSDIAFEVKKGDRVAQLILERIFTPEVKEVSTLEETERGAGGYGSTGTR* # PASA_UPDATE: g8040.t1, single gene model update, valid-1, status:[pasa:asmbl_8207,status:12], valid-1 NODE_564_length_21132_cov_47.1876 . gene 12528 15863 . + . ID=g8040;Name=g8040.t1 NODE_564_length_21132_cov_47.1876 . mRNA 12528 15863 . + . ID=g8040.t1;Parent=g8040;Name=g8040.t1 NODE_564_length_21132_cov_47.1876 . exon 12528 12590 . + . ID=g8040.t1.exon1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . CDS 12528 12590 . + 0 ID=cds.g8040.t1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . exon 12700 12914 . + . ID=g8040.t1.exon2;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . CDS 12700 12914 . + 0 ID=cds.g8040.t1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . exon 13009 15045 . + . ID=g8040.t1.exon3;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . CDS 13009 15045 . + 1 ID=cds.g8040.t1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . exon 15218 15337 . + . ID=g8040.t1.exon4;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . CDS 15218 15337 . + 1 ID=cds.g8040.t1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . exon 15529 15863 . + . ID=g8040.t1.exon5;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . CDS 15529 15709 . + 1 ID=cds.g8040.t1;Parent=g8040.t1 NODE_564_length_21132_cov_47.1876 . three_prime_UTR 15710 15863 . + . ID=g8040.t1.utr3p1;Parent=g8040.t1 #PROT g8040.t1 g8040 MNFFKKKTKAPPALPPTDYGQSSSRGGSVPSTPPPSKGEAGPPPLPARNSGSPSASPTLPRRPMSAFPTAVSTAEQPREVHSGTSPSAQRRPIANNSAVQWQQRPLGMTTSSPGTPKALHSQPRINSSSAGQCQRQLGMTMSSPGTPKARQVRRLGSAVQCQQRPLGMTTSSLGTLKAHQVRRLGSAVQCQQRPLVTTTSSPGTLKALQSQPRINSSSAGQCQLRPLGMTMSSLGMLKAHQVRRLGSAVQCQQRPLGMTMSSLGMPKAHQVRRLDSAVQCQQRPLVMIMSNLGTPKAHQVRRLGSAVQCQQRPLVTTTSSPGTPKALQSQPRINSSSAVQCQQRPLGMTTSSPGTPKAXXXQQQQRRPVPAAPAGDDYEQPWDAKGAPSTPTGQRRPVPAPAGDDYEQPWDAKGAPSTPTGQRRPVPAAPSGDDYEQPWDAPAPSKAPMTYPTINRRPGPPALPQRTTSSAGDDYEQPFDVATQQTYSPGPQRRAPAPAPVPVADSQSDYDIAFDAYADEYKRPTAARPVSVAVNLTRQTSGAGAPSLPPRASVAGPAAPPRTSVSGPAAPPRPTRTSAVEQSADYLHEDDIEGPTGARYANEQGGEGGDYIEPSDDHVRPANNADYLEPVDEGAPGGGDYIIPVEESGTRAPPAKLPRPVTMAAASYAGDYIVPVEESAARAPLRSPRPSTTLMSEEYIEPVDDSSHYSLSARGSSLGGRPGTPTSPRPVSPAPRPSSTAIAGGNVHRVPSSSGASRPVPTPAPRAIDVESWFHGRLARPQAEALLRNTPEGSFLVRNSQQNDHDYSLSFRNATEIMHMIISRGQDGAYVLGAYSRKFDTVAGMIAHYQVHKLNIKGAEHTILKNGIVRR* # ORIGINAL: g8041.t1 original gene structure, not modified by PASA NODE_564_length_21132_cov_47.1876 AUGUSTUS gene 17021 19449 . + . ID=g8041;Name=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS mRNA 17021 19449 . + . ID=g8041.t1;Parent=g8041;Name=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 17021 17542 . + . ID=g8041.t1.exon1;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 17021 17542 . + 0 ID=cds.g8041.t1;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 17809 17934 . + . ID=g8041.t1.exon2;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 17809 17934 . + 0 ID=cds.g8041.t1;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 18046 18311 . + . ID=g8041.t1.exon3;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 18046 18311 . + 0 ID=cds.g8041.t1;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 18474 18716 . + . ID=g8041.t1.exon4;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 18474 18716 . + 1 ID=cds.g8041.t1;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS exon 18993 19449 . + . ID=g8041.t1.exon5;Parent=g8041.t1 NODE_564_length_21132_cov_47.1876 AUGUSTUS CDS 18993 19449 . + 1 ID=cds.g8041.t1;Parent=g8041.t1 #PROT g8041.t1 g8041 MLQEPVADLAVRRDRQPPEYCGGNYGEKRRPVIGESLRQFDGAHNGVEQMRSMALRRDIHTKQNRMTASSPALSFSSYGVHSVEDLVRHDDNAQYCQSTHDTFEDRQQAHDPWAAPPRVGSQVGPPDVVRIPTAGVEGVGAAFSFMIMVPCRNEEEVIENTLRRLSELGDEYHKVSILVVNDGSTDATADIVGRVRDEVGDGSIDILNVPKENSGQGKSEALNKGFACLLTQDAFRRQVEQRDHNLVIGIFDADGVPDRSILRDAAAHFYCNDKIGAVNSSIRIRNRQKSLLARMQDIEFFVLARMYNATRGLLLENAFLGGNGQFMRATAVIDLIEQYGYAWTNKQLTEDLDIGIRILALGWKVSHMHRTFVHQQGLSSIKSLYRQRIRWAWGTMQVCFAYVVRPRIFLETKITFMGRIDLFMTLLNPFVVCVLLPFTILTLILYAAGAVTLVLPIEAYLCWLFTSGWSFFALVGLLRSTEYRLYAPLYLLGYIVYVFVLIPTQLMGFWRVLTRQKPVWAKTARESEGRPPTVHVA* # PASA_UPDATE: g8037.t1, single gene model update, valid-1, status:[pasa:asmbl_8208,status:12],[pasa:asmbl_8213,status:12], valid-1 NODE_564_length_21132_cov_47.1876 . gene 687 3450 . - . ID=g8037;Name=g8037.t1 NODE_564_length_21132_cov_47.1876 . mRNA 687 3450 . - . ID=g8037.t1;Parent=g8037;Name=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 3421 3450 . - . ID=g8037.t1.exon1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 3421 3450 . - 0 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 3189 3288 . - . ID=g8037.t1.exon2;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 3189 3288 . - 0 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 2697 3053 . - . ID=g8037.t1.exon3;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 2697 3053 . - 2 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 2369 2451 . - . ID=g8037.t1.exon4;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 2369 2451 . - 2 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 1975 2123 . - . ID=g8037.t1.exon5;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 1975 2123 . - 0 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 1384 1526 . - . ID=g8037.t1.exon6;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 1384 1526 . - 1 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . exon 687 1250 . - . ID=g8037.t1.exon7;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . CDS 1081 1250 . - 2 ID=cds.g8037.t1;Parent=g8037.t1 NODE_564_length_21132_cov_47.1876 . three_prime_UTR 687 1080 . - . ID=g8037.t1.utr3p1;Parent=g8037.t1 #PROT g8037.t1 g8037 MADDSIVDDAMMLDPTLKKKKKKKKALDLDGDDDAAVPEVAVEAAAAPAPADADDNLDDLLLKKKKKKKKVAIDDDDVADVTEVPGADMDAELSSLPQKKKKKKKAIDVAEDDEAGDAGDAGEVPIGEDGTEFNADEPEDDEELFAKTKKKHRKRIELDDEDDEDDLMDITSSRGAEAWIGTDRDYTYQELLERAFGIMREKNPDHEAGEKRRFVMKPPQVVRIGTKKCAFVNFTEICKLLHRQPDHLLAYILAELGTSGSVDGNNQLVIRGRFQQKQMENVLRRYIREYVTCHTCRSPDTMLSKENRLFFLHCESCNSRCSVAAIKAGYQAVTTKRAATRTG* # PASA_UPDATE: g8039.t1, single gene model update, valid-1, status:[pasa:asmbl_8209,status:12],[pasa:asmbl_8210,status:12], valid-1 NODE_564_length_21132_cov_47.1876 . gene 5937 12129 . - . ID=g8039;Name=g8039.t1 NODE_564_length_21132_cov_47.1876 . mRNA 5937 12129 . - . ID=g8039.t1;Parent=g8039;Name=g8039.t1 NODE_564_length_21132_cov_47.1876 . five_prime_UTR 12059 12129 . - . ID=g8039.t1.utr5p1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 12033 12129 . - . ID=g8039.t1.exon1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 12033 12058 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 11782 11922 . - . ID=g8039.t1.exon2;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 11782 11922 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 11291 11413 . - . ID=g8039.t1.exon3;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 11291 11413 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 10996 11158 . - . ID=g8039.t1.exon4;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 10996 11158 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 10748 10849 . - . ID=g8039.t1.exon5;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 10748 10849 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 10533 10634 . - . ID=g8039.t1.exon6;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 10533 10634 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 10230 10420 . - . ID=g8039.t1.exon7;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 10230 10420 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 9973 10126 . - . ID=g8039.t1.exon8;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 9973 10126 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 9361 9789 . - . ID=g8039.t1.exon9;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 9361 9789 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 9072 9178 . - . ID=g8039.t1.exon10;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 9072 9178 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 8857 8911 . - . ID=g8039.t1.exon11;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 8857 8911 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 8571 8738 . - . ID=g8039.t1.exon12;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 8571 8738 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 8164 8366 . - . ID=g8039.t1.exon13;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 8164 8366 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 7863 8032 . - . ID=g8039.t1.exon14;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 7863 8032 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 7550 7692 . - . ID=g8039.t1.exon15;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 7550 7692 . - 2 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 7315 7430 . - . ID=g8039.t1.exon16;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 7315 7430 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 7032 7115 . - . ID=g8039.t1.exon17;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 7032 7115 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 6833 6900 . - . ID=g8039.t1.exon18;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 6833 6900 . - 1 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 6487 6653 . - . ID=g8039.t1.exon19;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 6487 6653 . - 2 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 6236 6361 . - . ID=g8039.t1.exon20;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 6236 6361 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . exon 5937 6131 . - . ID=g8039.t1.exon21;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . CDS 6030 6131 . - 0 ID=cds.g8039.t1;Parent=g8039.t1 NODE_564_length_21132_cov_47.1876 . three_prime_UTR 5937 6029 . - . ID=g8039.t1.utr3p1;Parent=g8039.t1 #PROT g8039.t1 g8039 MADYEVVNSQFRYGSMSASSSSAYVASLVDDDFDVVEEEAKKHKQPGAIKAPPEHEWFHGKMTREDAEALLVKKGGEGSYLIRESIRQPGDYSLSFRIGGGIVKHFRIINDWGDFFMGGRRFHSLIDLIGYYSNSFLAGNLCLKFPLMPDGQIYESGVRKIVIALYDYTKSSTDELSFKKGDTLSVLNDDDPNWWWARLKQASAPSVVGFIPSTLVREKKDATPAAAPAAAPAAGGVPPRSHWLHGKISRDAAKVLLMRDGREGSYLVRESENVAGDYSISFRVVGQVKHFKIEKSGRLYMCGGRSFPTLEEVILRYLREPLSDNKCLEQPLVPANAQEHTYATAQEEYATVEAVPDRGLHAAAVAANRTSEVPGSPMSRSLTMSFSGGAPPPVPQRQMQARSGSYDMSGVLVKKSRTAKKWKTLFFALVGAKRRLYYFEAEGSPRPKGIVDLTCCSVSNLHDTFFGRPNCFQIIHKGIEEQTYYLCANTDDDKMAWMQILLQYCGTAEGQPPHPARTDDSVMEIKSLVLTVAEARDITSRLPHPYCIISLDNVRQARTQIKTRASPFWSEEFKFEDLPHNFAQFTVIVLTKNKIQKDTEVAKCVVNVSRLADCKQHEDWYTLTPIDDKDKETLGSIRLKAKFNNEFILPLTEYSQLKTLVIAPDMGAIQAIGNVGKDREEVARTLLKIFQTENRATEFLRQLNAIEVSSTEDPNTIFRGNSLATKAMDQYMKLTGLPYLHQTVGDAVKKLFESNLSCEMDPSRLPKGTDVKENLKRLLGHLQAIWDAIQASVDTCPTELRYVFHNLQEDVKNRWGEHIAKYSAVSGFIFLRLFCPAILNPKLFNMMSDHPSEHTARTLTLVAKSLQNLANLVEFGGKEPYMMDVNFFILENKSKMKLFIDKISTMPAYPKFAKVQPINPARELASIQRFVLRNKDDILKYGVDNKDSTAEKLVSVSEKIRARESAYVEEPTYQNVSRK* # PASA_UPDATE: g8036.t1, single gene model update, valid-1, status:[pasa:asmbl_8212,status:12], valid-1 NODE_564_length_21132_cov_47.1876 . gene 146 511 . + . ID=g8036;Name=g8036.t1 NODE_564_length_21132_cov_47.1876 . mRNA 146 511 . + . ID=g8036.t1;Parent=g8036;Name=g8036.t1 NODE_564_length_21132_cov_47.1876 . five_prime_UTR 146 147 . + . ID=g8036.t1.utr5p1;Parent=g8036.t1 NODE_564_length_21132_cov_47.1876 . exon 146 511 . + . ID=g8036.t1.exon1;Parent=g8036.t1 NODE_564_length_21132_cov_47.1876 . CDS 148 270 . + 0 ID=cds.g8036.t1;Parent=g8036.t1;5_prime_partial=true NODE_564_length_21132_cov_47.1876 . three_prime_UTR 271 511 . + . ID=g8036.t1.utr3p1;Parent=g8036.t1 #PROT g8036.t1 g8036 WDDDVVFKNCAKGDEGQQKRFVNDTLRSDFHRKFMSKYIK* # PASA_UPDATE: g9987.t1, single gene model update, valid-1, status:[pasa:asmbl_6163,status:12], valid-1 NODE_350_length_26317_cov_40.3162 . gene 24567 26176 . + . ID=g9987;Name=g9987.t1 NODE_350_length_26317_cov_40.3162 . mRNA 24567 26176 . + . ID=g9987.t1;Parent=g9987;Name=g9987.t1 NODE_350_length_26317_cov_40.3162 . five_prime_UTR 24567 24819 . + . ID=g9987.t1.utr5p1;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . exon 24567 24875 . + . ID=g9987.t1.exon1;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . CDS 24820 24875 . + 0 ID=cds.g9987.t1;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . exon 25219 25348 . + . ID=g9987.t1.exon2;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . CDS 25219 25348 . + 1 ID=cds.g9987.t1;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . exon 25813 25896 . + . ID=g9987.t1.exon3;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . CDS 25813 25896 . + 0 ID=cds.g9987.t1;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . exon 26000 26176 . + . ID=g9987.t1.exon4;Parent=g9987.t1 NODE_350_length_26317_cov_40.3162 . CDS 26000 26176 . + 0 ID=cds.g9987.t1;Parent=g9987.t1 #PROT g9987.t1 g9987 MTSVEEHRDSDSHDQLSDSFCSEESEGDFLSIVHANDDLEEAELELEYALMEGVPVIIIDHQDVGRATASAIRLGNIMHKTAVLAGLGCLSAGIVSRLLPLSPLAVALPCGLMSVSSVLVYDLSWRTDPCCKYQVRVLHANFPCRIAL* # ORIGINAL: g9982.t1 original gene structure, not modified by PASA NODE_350_length_26317_cov_40.3162 AUGUSTUS gene 6814 10542 . - . ID=g9982;Name=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS mRNA 6814 10542 . - . ID=g9982.t1;Parent=g9982;Name=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 10393 10542 . - . ID=g9982.t1.exon1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 10393 10542 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 9862 10254 . - . ID=g9982.t1.exon2;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 9862 10254 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 9533 9772 . - . ID=g9982.t1.exon3;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 9533 9772 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 7981 9357 . - . ID=g9982.t1.exon4;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 7981 9357 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 7653 7769 . - . ID=g9982.t1.exon5;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 7653 7769 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 7255 7414 . - . ID=g9982.t1.exon6;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 7255 7414 . - 0 ID=cds.g9982.t1;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 6814 7082 . - . ID=g9982.t1.exon7;Parent=g9982.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 6814 7082 . - 2 ID=cds.g9982.t1;Parent=g9982.t1 #PROT g9982.t1 g9982 MQSSVVNMEVDSAPAAVDAPVDGLVTEEMIQQEQSFHLTSKVEEEKLRNQAQKEYQDTVDTQRYQRLKFLLDKTKIYSDFLKQKLETQQLAQREKAEKDAEKKRARAEAAKEVAATKSDGEGEEETTAAAAQRSTRRRKSEIPAPPAANATPAKSKAKRQPAKRKAKDDGKYLLADYVGEDGTKRPKREDGEQDAADKVDGADSQPAATAGHDAIVIDGVAASPRQPHLLTGGILREYQLAGVEWLVSLWENGLNGILADEMGLGKTIQCIAFACHLLEQGIKGPFLIATPLSTLSNWVTEFRRFAPSVPVILYHGPIDQRSALRRKIGKLTTLPTGQQCYPIVITSYEIVMNDRKYLQGLMWKYIIVDEGHRIKNLNCRLIRELKSYRSANRLLLTGTPLQNNLSELWSLLNFLLPDIFDDLESFQRWFDFSEVGNEEGDQRFVEREQRENVLSKLHHILQPFLLRRLKTDVETFMPKKKEIVVYAPYSRKQKEFYEATLNKTIMEMVGGATSLDDPMEVDISPDDVPKDDSTKANSDEDDSALSAPMSGNDTATPASATVTPQSRRSSKRLSTASAGDRSYKELSDRAYFKKLESSGDTPSSVSRGPVYKQTNSSSVVTIKLQNVLMQLRKVCNHPYLLEYPLDAQGEYRVDEELVRCSGKMMLLDQLLPALKDGGHKVLVFSQMTSMLDVLEDYLHMRGHRFCRLDGAVSLTDRQEQIKAFNTDPDIFVFLLSTRAGGLGINLVSADTVVIYDSDWNPQVDMQAQDRCHRIGQTKPVMVYRLITANSIEQKILERATAKRKLEKIIIHKGTFRNPTQSSQAITGNDLIELLRGEESEKLLVGESTAMHTVLSHADLRRLLDRTDGSGESGGCLGGLARFKVVDETAAAPADLALGHVE* # PASA_UPDATE: g9985.t1, single gene model update, valid-1, status:[pasa:asmbl_6162,status:3], valid-1 NODE_350_length_26317_cov_40.3162 . gene 16167 19329 . + . ID=g9985;Name=g9985.t1 NODE_350_length_26317_cov_40.3162 . mRNA 16167 19329 . + . ID=g9985.t1;Parent=g9985;Name=g9985.t1 NODE_350_length_26317_cov_40.3162 . five_prime_UTR 16167 16248 . + . ID=g9985.t1.utr5p1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 16167 16384 . + . ID=g9985.t1.exon1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 16249 16384 . + 0 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 16488 16519 . + . ID=g9985.t1.exon2;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 16488 16519 . + 2 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 16673 16913 . + . ID=g9985.t1.exon3;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 16673 16913 . + 0 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 17133 17302 . + . ID=g9985.t1.exon4;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 17133 17302 . + 2 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 17572 18025 . + . ID=g9985.t1.exon5;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 17572 18025 . + 0 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 18309 18452 . + . ID=g9985.t1.exon6;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 18309 18452 . + 2 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 18812 18924 . + . ID=g9985.t1.exon7;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 18812 18924 . + 2 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . exon 19113 19329 . + . ID=g9985.t1.exon8;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . CDS 19113 19226 . + 0 ID=cds.g9985.t1;Parent=g9985.t1 NODE_350_length_26317_cov_40.3162 . three_prime_UTR 19227 19329 . + . ID=g9985.t1.utr3p1;Parent=g9985.t1 #PROT g9985.t1 g9985 MSGTTGFRTEKDSMGEIQVATDKYWGAQTQRSLHHFHIGTEHFPREMIRALGVLKKAAAITNGRLGMLPQEKVDLISRAADEVIDGRLDAHFPLYVWQTGSGTQTNMNANEVISNRAIEMVGGVMGSQKPIHPNDDVNRGQSSNDTFPTAMHIAAAEQIVHALRPSIIALRDALKSKSDQWQSIVKIGRTHLQDATPLTLGQEFSGYVAQLDGVLVGIDATLDRVFQLALGGTAVGTGLNTHARYAEESAKAIAELTGLPFRSAPNKFAALAGNDELVALHGSLKTLAATLNKIANDIRWLGSGPRCGFGELVLPENEPGSSIMPGKVNPTQCEAITMIAAQVMGNDVSVNIGGMSGNFELNVFKPVIIHNVLQSIRLMADGARSFREFCIDGLFPNTVRINEHLTHSLMLVTALNPHIGYDNSAKIAKKAHAEGTSLKEAAIAMGLLTSEQFDQWVIPEKMTRPSQ* # ORIGINAL: g9984.t1 original gene structure, not modified by PASA NODE_350_length_26317_cov_40.3162 AUGUSTUS gene 14539 14934 . - . ID=g9984;Name=g9984.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS mRNA 14539 14934 . - . ID=g9984.t1;Parent=g9984;Name=g9984.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 14539 14934 . - . ID=g9984.t1.exon1;Parent=g9984.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 14539 14934 . - 0 ID=cds.g9984.t1;Parent=g9984.t1 #PROT g9984.t1 g9984 MAAAVKSKCILPVCGAASVAHPTLPTHPAHSMCPGESIPRSASSSTSAVRPQSRTLAVLSISGGGKSGSRLATEEFIGIKKHRRVSEIVREERSLSRVGSESADEVEWRGLAYCAPEIIFNRIKRDDASMT* # ORIGINAL: g9981.t1 original gene structure, not modified by PASA NODE_350_length_26317_cov_40.3162 AUGUSTUS gene 3603 6208 . - . ID=g9981;Name=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS mRNA 3603 6208 . - . ID=g9981.t1;Parent=g9981;Name=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 5910 6208 . - . ID=g9981.t1.exon1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 5910 6208 . - 0 ID=cds.g9981.t1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 5724 5792 . - . ID=g9981.t1.exon2;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 5724 5792 . - 1 ID=cds.g9981.t1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 4923 5083 . - . ID=g9981.t1.exon3;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 4923 5083 . - 1 ID=cds.g9981.t1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 4650 4722 . - . ID=g9981.t1.exon4;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 4650 4722 . - 2 ID=cds.g9981.t1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 3982 4175 . - . ID=g9981.t1.exon5;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 3982 4175 . - 1 ID=cds.g9981.t1;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 3603 3766 . - . ID=g9981.t1.exon6;Parent=g9981.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 3603 3766 . - 2 ID=cds.g9981.t1;Parent=g9981.t1 #PROT g9981.t1 g9981 MASPLYATHATLDTEYSADSAEWCPIEGHTDVLACGTYQLLAAEEASAPVSVEANGNKSDVAGTSSSGEDDDSESVGKDAPRKRVGRLLLFEWRDDDAAGDCSTGRLHETQRMDLPALLDTKCDDPRIVTSDSSGGVSVWRIDGSEGLLCDAEWNAHGFEAWVAAFNQWQTDIVYSGGDDSLLKGWDLRQGTGRPTFTSKSYDESVNLWDVRSMVRPLVSHRLTGGVWRLKWHPTRDDVLLAACMYGGFAIARVSGISGVGTDVAVASPSVETIVEHKGHTSIAYGADWRQSANAESSDLIATCSFYDHSLQIWTPSSL* # ORIGINAL: g9983.t1 original gene structure, not modified by PASA NODE_350_length_26317_cov_40.3162 AUGUSTUS gene 11189 14009 . + . ID=g9983;Name=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS mRNA 11189 14009 . + . ID=g9983.t1;Parent=g9983;Name=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 11189 11371 . + . ID=g9983.t1.exon1;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 11189 11371 . + 0 ID=cds.g9983.t1;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 11498 11602 . + . ID=g9983.t1.exon2;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 11498 11602 . + 0 ID=cds.g9983.t1;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 11718 12118 . + . ID=g9983.t1.exon3;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 11718 12118 . + 0 ID=cds.g9983.t1;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 12300 13710 . + . ID=g9983.t1.exon4;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 12300 13710 . + 1 ID=cds.g9983.t1;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS exon 13866 14009 . + . ID=g9983.t1.exon5;Parent=g9983.t1 NODE_350_length_26317_cov_40.3162 AUGUSTUS CDS 13866 14009 . + 0 ID=cds.g9983.t1;Parent=g9983.t1 #PROT g9983.t1 g9983 MVIQRGGTGAALSKSHGNMNPHRALGTKQAGNMRTKATINRLKLYKSGGKVIRARNGKVLQAAPLQQRVASGTVARVQADRRWFGNTRVIGQKVLEAFRQAMSEKMHDPYTVVMRQSKLPMSLLTDSTKVSRSHLLDTEAFDSTFGPKSQRKRPRLQTTDMSEYIAAASTLAETYSEEKDVNLRSETDPHTERPEVTDKMFTKGQSRRIWGELYKVIDSSDVVIQVLDARDPMGTRSKHIEDYMRKEKTHKHLVFVLNKCDLVPTWATSRWVKVLSKEYPTLAFHASVTNPFGKGALIQLLRQFGALHNDKKQISIGFIGYPNVGKSSVINTLRGKKVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYASGDTETDIVLKGVVRVENIKEPADHIPTVLQRIKTEYLAKTYGVDKWSDPVDFLEQMAKRMGKLLKGGEPDVNTVAKMILHDWQRGRVPYFVAPPREEGDEAKGENAGASAATTTTTTTTAKAADSAVEKASDANNKNAKFQVKQKLSKISVNLGFTDEDLKGDGVVDESDGDDDGDVDSDVISEDDEGDDVASEGSQPDVAAAKGDAKKSKKRKSADGAAGAMDWETVLRSAVGSSAADNGREDDGDDASDDRPAKRARVIHADDPEARGDSAEDDDPDVESARRLRHKKVAARSKIVQNGFVVTEKATVVADEDVDDGRIKKTVKDKRKTTNKMKVGSHYYEGANVKNKNTKKKSPGKTERTSPASAKGKRTRR* # PASA_UPDATE: g9980.t1, single gene model update, valid-1, status:[pasa:asmbl_6161,status:3], valid-1 NODE_350_length_26317_cov_40.3162 . gene 299 3344 . + . ID=g9980;Name=g9980.t1 NODE_350_length_26317_cov_40.3162 . mRNA 299 3344 . + . ID=g9980.t1;Parent=g9980;Name=g9980.t1 NODE_350_length_26317_cov_40.3162 . five_prime_UTR 299 435 . + . ID=g9980.t1.utr5p1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 299 542 . + . ID=g9980.t1.exon1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 436 542 . + 0 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 664 815 . + . ID=g9980.t1.exon2;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 664 815 . + 1 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 1015 1152 . + . ID=g9980.t1.exon3;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 1015 1152 . + 2 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 1283 1469 . + . ID=g9980.t1.exon4;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 1283 1469 . + 2 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 1812 1947 . + . ID=g9980.t1.exon5;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 1812 1947 . + 1 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . exon 2126 3344 . + . ID=g9980.t1.exon6;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . CDS 2126 3157 . + 0 ID=cds.g9980.t1;Parent=g9980.t1 NODE_350_length_26317_cov_40.3162 . three_prime_UTR 3158 3344 . + . ID=g9980.t1.utr3p1;Parent=g9980.t1 #PROT g9980.t1 g9980 MRLTLARVSEIAKGDVREIKSLDASKSEIDAVDDLNACVELRKLNLSENELQSLTDLSYCNWLTWLNVSHNHLSTLRGIEWMSQLNVLNASHNEIAEISVFPKLKNLKALVLNNNRIAQMETVAGLTGLNTLVLSHNKIAEIKGTKPLRALTKLSVAHNKIRVVPDLSDNDELVELRLNDNKIMRLPDTLKSNPKLKTIDFGNNLIKSIADIEVIGLLRGLTNINLKGNLVCEVEGYADKVRELCPTLLVLDGKRVIPRKNQVRQLLKQVALDRAEKSRSRGDRFKGRTPTAPSGDGEGSADTDADADADADGKGKASEEGEGAADAMDGEGTAGRAASSRIHRPTGGAGDLRGRGKAPSSFAKGQKRFTPDDARHTTAPAPKHSKSTVKRPRESAEEDAEQHVTNAIATEGRDGGKRRKIGAVDAGDIAAAQTKKTDRTHVTGDKVHAKNSGNRNAPAKPSEAAIRPPRPTAPAEAAWVTTKTAGAKRKADSDLPADADADADRLGAPKRAKKGGDDGKGPAAAAPPQKTRSGVVAVEHVTRPSAGAKGKGSAAEKPAVDPLALFAKGWSDDTVGTGLGSGW* # PASA_UPDATE: g9986.t1, single gene model update, valid-1, status:[pasa:asmbl_6164,status:3], valid-1 NODE_350_length_26317_cov_40.3162 . gene 19398 24063 . - . ID=g9986;Name=g9986.t1 NODE_350_length_26317_cov_40.3162 . mRNA 19398 24063 . - . ID=g9986.t1;Parent=g9986;Name=g9986.t1 NODE_350_length_26317_cov_40.3162 . five_prime_UTR 23857 24063 . - . ID=g9986.t1.utr5p1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 23674 24063 . - . ID=g9986.t1.exon1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 23674 23856 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 23264 23425 . - . ID=g9986.t1.exon2;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 23264 23425 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 22841 22959 . - . ID=g9986.t1.exon3;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 22841 22959 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 22193 22449 . - . ID=g9986.t1.exon4;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 22193 22449 . - 1 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 21762 22015 . - . ID=g9986.t1.exon5;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 21762 22015 . - 2 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 21356 21535 . - . ID=g9986.t1.exon6;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 21356 21535 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 21000 21176 . - . ID=g9986.t1.exon7;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 21000 21176 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 20687 20833 . - . ID=g9986.t1.exon8;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 20687 20833 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 20286 20538 . - . ID=g9986.t1.exon9;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 20286 20538 . - 0 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 20091 20171 . - . ID=g9986.t1.exon10;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 20091 20171 . - 2 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . exon 19398 19893 . - . ID=g9986.t1.exon11;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . CDS 19781 19893 . - 2 ID=cds.g9986.t1;Parent=g9986.t1 NODE_350_length_26317_cov_40.3162 . three_prime_UTR 19398 19780 . - . ID=g9986.t1.utr3p1;Parent=g9986.t1 #PROT g9986.t1 g9986 MEIVYVYSKKRNEFGRQCNFSDRPTELICDIQPEPDLEDQYVERNPTHTSVQCVADMSEHEVNTERFSTANMGINHTEGGWPKDVNPSEVEHTIRFRKKVEKDETYVQAIQALGETMEHCIKQNTAIDIYETYFSHGTTDHSGDPPTAKTINVFRDPSPIARSATSISWYPDGARKVAVAYSILDFQHMPSGMSLDSYIWDIENPNTPDQVIKPASPLLCLEYNPKDPHILVGGSYNGLVSFWDTRKGSQPVDVSPIERSHRDPVYKALWISSKTGTEFFSASTDGQVLWWDIRKMGEPTESLLLDPEKSGSPLGAVALEYESTMPTKFMVGTELGHILACNRKAKNPSERIVATYTGHHGPVYALQRNPFFPKNFLTVGDWAARIWSEDLRTPIMWTKYHVPYLTDGCWSPTRPGVFFTTKMDGTLDVWDYLFKQNDPTLTLQVSDSALTSLRVQEQGRLIATGGKDGITTLLELGDSLYMMQPNEKASVSQMFEREAKREKTLETRAREIRLKAQAAERTKPSSARGDRRGHGDDEEGDPIQRAEQDFWNIIKAEKAAEEEGVKQQELQMSEGRTGSAIGNAQGETNDDFTMDEEGEPIDGEGDGDYYDEEAPDDSLAEDGQDGGHDDQQGQSEDPPSQ* # ORIGINAL: g9788.t1 original gene structure, not modified by PASA NODE_1729_length_9493_cov_40.8928 AUGUSTUS gene 150 4618 . + . ID=g9788;Name=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS mRNA 150 4618 . + . ID=g9788.t1;Parent=g9788;Name=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 150 539 . + . ID=g9788.t1.exon1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 150 539 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 811 900 . + . ID=g9788.t1.exon2;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 811 900 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 1154 1391 . + . ID=g9788.t1.exon3;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 1154 1391 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 1597 2759 . + . ID=g9788.t1.exon4;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 1597 2759 . + 2 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 3150 3275 . + . ID=g9788.t1.exon5;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 3150 3275 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 3572 3895 . + . ID=g9788.t1.exon6;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 3572 3895 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 4232 4272 . + . ID=g9788.t1.exon7;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 4232 4272 . + 0 ID=cds.g9788.t1;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 4543 4618 . + . ID=g9788.t1.exon8;Parent=g9788.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 4543 4618 . + 1 ID=cds.g9788.t1;Parent=g9788.t1 #PROT g9788.t1 g9788 VWYYGILYGKADPVPSHYSADLRTVLNSMLEKNPTRRPPARAIVKMPMFKSASERLLPRAVENEEELRHKIAMMQATYKLDKPPAIPRNPALLEQLEKEKEKEKEKEKGGPSVAQGQPLPQPKAANARAKLQRGASEDARGQPSQTAASKVRRQSEGKYSPAERRRAESKGANALANNANVANPDFKPRTDKESRRSIEESARAKSEQMREHAKEMNSMIKNARPKFDKSQYIRRKSEGDHPNAADIGGVVTREDRIPEEQTLNDHHNNNSDDDGRGSLPEEEDGGGSGDAREYESSSRVRAVAAAAAALKKGDAGVEIAGVDADGVVHSPLRESGKGSTANASSTSSGSQRHRILKNSVLKKIAQKPTCNGAPDANESSAAVGADASGRGSSSSSASSVASSGSASASSGSANASGSGSGRGSGESGRSESVGSGGSADKKSGVKARVVSRGRRASRDHSTEEEWDDDDGEIFSTRQMSQRGRHHRPSARVYVAKTLGDRGITSEEDEGRRDDSACEDGKSKVKAGNRASRVSRQKTLSSGSSDNDTPSRDSQPVADAESTYRVVVQGKPRGRAESDPSDAKTVRGKPRGPTAAAGGKLSVLAAEEDCVHSPMRADGPTQKRPLEKRRSFVALALSKEKEKASRDPKGKRESDSEGPKDSDRPPKDIAIQFYMMGHEVKNLCNNDKIVLPPIVNGGDGVAEGVPVGDVQHQQQQQQQQQQQQPSGGDVSGDKNAGSPRTPRGNGNDGYAVFVAKDKDGNRSSMLAKFNESDPVEEKESRKGPSEKKAESWILPLKNGASRAKDILTDANAGPKQ* # ORIGINAL: g9789.t1 original gene structure, not modified by PASA NODE_1729_length_9493_cov_40.8928 AUGUSTUS gene 5627 7364 . + . ID=g9789;Name=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS mRNA 5627 7364 . + . ID=g9789.t1;Parent=g9789;Name=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 5627 5696 . + . ID=g9789.t1.exon1;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 5627 5696 . + 0 ID=cds.g9789.t1;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 6000 6089 . + . ID=g9789.t1.exon2;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 6000 6089 . + 2 ID=cds.g9789.t1;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 6383 6477 . + . ID=g9789.t1.exon3;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 6383 6477 . + 2 ID=cds.g9789.t1;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 6638 6730 . + . ID=g9789.t1.exon4;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 6638 6730 . + 0 ID=cds.g9789.t1;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS exon 7119 7364 . + . ID=g9789.t1.exon5;Parent=g9789.t1 NODE_1729_length_9493_cov_40.8928 AUGUSTUS CDS 7119 7364 . + 0 ID=cds.g9789.t1;Parent=g9789.t1 #PROT g9789.t1 g9789 MDDAESDPDHVANSGEDDVGLPRSAVYKLIKEIVPNDIRVAIDARELLMDCCTEFIQLLSSEANEVCTKDGRKTISPEHVFKALEVFVGSTLQSLGFEEYVADVQSTFKDHKAQSTKRQKSITNAEALGMSEEELIRQQQALFAKAKAQYDANTSAVSASAGGSLSAELPPPPSARVFDPRLPAHHSTNNVEESYDD* # PASA_UPDATE: g9790.t1, single gene model update, valid-1, status:[pasa:asmbl_2455,status:12], valid-1 NODE_1729_length_9493_cov_40.8928 . gene 8593 9306 . - . ID=g9790;Name=g9790.t1 NODE_1729_length_9493_cov_40.8928 . mRNA 8593 9306 . - . ID=g9790.t1;Parent=g9790;Name=g9790.t1 NODE_1729_length_9493_cov_40.8928 . five_prime_UTR 9238 9306 . - . ID=g9790.t1.utr5p1;Parent=g9790.t1 NODE_1729_length_9493_cov_40.8928 . exon 9222 9306 . - . ID=g9790.t1.exon1;Parent=g9790.t1 NODE_1729_length_9493_cov_40.8928 . CDS 9222 9237 . - 0 ID=cds.g9790.t1;Parent=g9790.t1 NODE_1729_length_9493_cov_40.8928 . exon 8593 9000 . - . ID=g9790.t1.exon2;Parent=g9790.t1 NODE_1729_length_9493_cov_40.8928 . CDS 8789 9000 . - 2 ID=cds.g9790.t1;Parent=g9790.t1 NODE_1729_length_9493_cov_40.8928 . three_prime_UTR 8593 8788 . - . ID=g9790.t1.utr3p1;Parent=g9790.t1 #PROT g9790.t1 g9790 MVQNIEKVLERGERIELLVDKTENLNEQAVVFKRHSTKLKKKMWWKNVKMMLLLGFTVAIILTIIIVAAVKPWEK* # PASA_UPDATE: g5728.t1, single gene model update, valid-1, status:[pasa:asmbl_3021,status:12],[pasa:asmbl_3022,status:12], valid-1 NODE_1920_length_8538_cov_40.6988 . gene 1050 2104 . - . ID=g5728;Name=g5728.t1 NODE_1920_length_8538_cov_40.6988 . mRNA 1050 2104 . - . ID=g5728.t1;Parent=g5728;Name=g5728.t1 NODE_1920_length_8538_cov_40.6988 . five_prime_UTR 1752 2104 . - . ID=g5728.t1.utr5p1;Parent=g5728.t1 NODE_1920_length_8538_cov_40.6988 . exon 1050 2104 . - . ID=g5728.t1.exon1;Parent=g5728.t1 NODE_1920_length_8538_cov_40.6988 . CDS 1050 1751 . - 0 ID=cds.g5728.t1;Parent=g5728.t1 #PROT g5728.t1 g5728 MYGVAILKGEEEAEMRYFNAAMSELTAKCRGLPVEAYGALDFYFPYAAAGLMVQFFVLQRDNGGTLIKRQTAPFFLDDPDHRWAIINVVRNIIRLAPLMVEKLPRIRLRLYGHIGDIREGRVVAMVEGQAKKTVYSSMKPLFLEVLLSLYQTIGSTKREGLPRVVKKAKMSQGRFSVVLEPVGYHHRPQGAVQFRAFLLNLLAALTFLHNNGFVHRDIQEANVIYDPIANELF* # PASA_UPDATE: g5730.t1, single gene model update, valid-1, status:[pasa:asmbl_3020,status:3], valid-1 NODE_1920_length_8538_cov_40.6988 . gene 5940 7722 . - . ID=g5730;Name=g5730.t1 NODE_1920_length_8538_cov_40.6988 . mRNA 5940 7722 . - . ID=g5730.t1;Parent=g5730;Name=g5730.t1 NODE_1920_length_8538_cov_40.6988 . five_prime_UTR 7608 7722 . - . ID=g5730.t1.utr5p1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . exon 7513 7722 . - . ID=g5730.t1.exon1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . CDS 7513 7607 . - 0 ID=cds.g5730.t1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . exon 7235 7334 . - . ID=g5730.t1.exon2;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . CDS 7235 7334 . - 1 ID=cds.g5730.t1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . exon 6847 6982 . - . ID=g5730.t1.exon3;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . CDS 6847 6982 . - 0 ID=cds.g5730.t1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . exon 6363 6647 . - . ID=g5730.t1.exon4;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . CDS 6363 6647 . - 2 ID=cds.g5730.t1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . exon 5940 6150 . - . ID=g5730.t1.exon5;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . CDS 5966 6150 . - 2 ID=cds.g5730.t1;Parent=g5730.t1 NODE_1920_length_8538_cov_40.6988 . three_prime_UTR 5940 5965 . - . ID=g5730.t1.utr3p1;Parent=g5730.t1 #PROT g5730.t1 g5730 MSQKAQQLRQMMRATQNVKSADKSRVTHKFAKYNSADQLVCVLCNSIVKSDALWAAHLQSPKHKENISSLKDGIPSAPQTAAATAGIGSDKRPRSDALQHDAAPPAKKPKMDTQIPTGIIPAQHTSTRPPTAAVTPQAVTSSAGGSSGGDALPMGFFDDPTRDWRHKDVEKAKEVQLGKEWEQFQTEVAHDEAIIQEVVREEENIEREDKDAELVHEQEQLVSRVQRLKELREAARLKPKKAVVAEDSGDSDIDPDSFDWRAKKVR* # ORIGINAL: g5729.t1 original gene structure, not modified by PASA NODE_1920_length_8538_cov_40.6988 AUGUSTUS gene 2690 5759 . + . ID=g5729;Name=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS mRNA 2690 5759 . + . ID=g5729.t1;Parent=g5729;Name=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 2690 2728 . + . ID=g5729.t1.exon1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 2690 2728 . + 0 ID=cds.g5729.t1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 2952 3047 . + . ID=g5729.t1.exon2;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 2952 3047 . + 0 ID=cds.g5729.t1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 3177 3426 . + . ID=g5729.t1.exon3;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 3177 3426 . + 0 ID=cds.g5729.t1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 3829 3972 . + . ID=g5729.t1.exon4;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 3829 3972 . + 2 ID=cds.g5729.t1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 4268 4702 . + . ID=g5729.t1.exon5;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 4268 4702 . + 2 ID=cds.g5729.t1;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS exon 5266 5759 . + . ID=g5729.t1.exon6;Parent=g5729.t1 NODE_1920_length_8538_cov_40.6988 AUGUSTUS CDS 5266 5759 . + 2 ID=cds.g5729.t1;Parent=g5729.t1 #PROT g5729.t1 g5729 MSPAKEDFNITSEEADRLEKAFKDETFRKMFKEYMEEIADPVNKKKYEDEILQLERERGIDAKFIHPQAGFVLKTKEATGQRRKVFINVCSSPEVAQASGARQTTGGASGIRWTLPHSLVPAREDKDKAGEACVVYDVVFHPDTLTLGKSDVRFKDMLSQTAIEGVMGKFGAALEKKYSIPKMSYKGTPSAAIIRNAHDGASDAAKAAYPPRDLFGQSIGTDKPTGTTASSLNGKVASLAEKFASSAALSTEQPAKVEEAKPLQQRSAVDMTESASVRVPKYTLTHRGKFDMGEFVQGSESTVRQSRPKELVYTVELPLLVIHIALPYPVDDENGSAKFDKKRKFLTLTLPVRPAARVVVSFPDAPEPVAEETSDTPVNDTVSGQEPNVSMPPSIGESEVAAQSQTHSDAARAPLVEEIPGVNDAVTAVTVATQGVAAPLSSASVATSGSESETSIAATAVAASPAKPHVVAPITVSAAVAYELD* # ORIGINAL: g4799.t1 original gene structure, not modified by PASA NODE_4056_length_2267_cov_33.0926 AUGUSTUS gene 2 2012 . + . ID=g4799;Name=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS mRNA 2 2012 . + . ID=g4799.t1;Parent=g4799;Name=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS exon 2 1387 . + . ID=g4799.t1.exon1;Parent=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS CDS 2 1387 . + 0 ID=cds.g4799.t1;Parent=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS exon 1612 1750 . + . ID=g4799.t1.exon2;Parent=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS CDS 1612 1750 . + 0 ID=cds.g4799.t1;Parent=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS exon 1907 2012 . + . ID=g4799.t1.exon3;Parent=g4799.t1 NODE_4056_length_2267_cov_33.0926 AUGUSTUS CDS 1907 2012 . + 2 ID=cds.g4799.t1;Parent=g4799.t1 #PROT g4799.t1 g4799 LCVPRNILTQDDGDEQRRESLARRRGSSDGRMEGIGSAEPNLQSPDAADIHAQADADRSGADAHASERSSASVLEGEGGDEGDRSDEMGLSDAESGHENAGHAVGDDSDGDGGQEEEVRVEIDENGITQHEITRNGEFFTGHPSKTPERYMRIRNYILAAWRKSQPRYLTKTSVRPGLKDCGDVNAIGRVHSYLEAVGAINCGDVVGGIARASYPRVKRRRATPGGDDGGRSGMSVADREAVAAAAADASDEAVSGPRRRRVRDETGQWVYEHELEGRTIMHGGSASASGLSSKDAGRARAMRLEQQEQQRLAAMNARYFADSYSSRGTASDDDGGEPGAGDPFALVACRRYGPSDPAPFRVLAGSNAMLIMDVHSHVAHTEVIGLLGGTYDDVGGVLHVVRAFPCNSLSTGMQCEMDPVSEMDARDAFAAAGLAVVGWYHSHPSFAPNPSMRDVENQTNYQTLFSRGGGLEPFIGVIVSPFDPQHPSNVSVFNFVTIGQDWNSTHEYRLPYACEKSIVPSEVLEAELLVEVARIVQRYRATK # PASA_UPDATE: g6118.t1, single gene model update, valid-1, status:[pasa:asmbl_3401,status:3], valid-1 NODE_205_length_31662_cov_42.3274 . gene 23276 28261 . + . ID=g6118;Name=g6118.t1 NODE_205_length_31662_cov_42.3274 . mRNA 23276 28261 . + . ID=g6118.t1;Parent=g6118;Name=g6118.t1 NODE_205_length_31662_cov_42.3274 . five_prime_UTR 23276 23340 . + . ID=g6118.t1.utr5p1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 23276 23437 . + . ID=g6118.t1.exon1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 23341 23437 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 23677 23821 . + . ID=g6118.t1.exon2;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 23677 23821 . + 2 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 23954 24033 . + . ID=g6118.t1.exon3;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 23954 24033 . + 1 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 24271 24396 . + . ID=g6118.t1.exon4;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 24271 24396 . + 2 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 25037 25194 . + . ID=g6118.t1.exon5;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 25037 25194 . + 2 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 25489 25734 . + . ID=g6118.t1.exon6;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 25489 25734 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 26060 26227 . + . ID=g6118.t1.exon7;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 26060 26227 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 26530 26663 . + . ID=g6118.t1.exon8;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 26530 26663 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 26918 27128 . + . ID=g6118.t1.exon9;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 26918 27128 . + 1 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 27359 27508 . + . ID=g6118.t1.exon10;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 27359 27508 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . exon 27736 28261 . + . ID=g6118.t1.exon11;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . CDS 27736 27840 . + 0 ID=cds.g6118.t1;Parent=g6118.t1 NODE_205_length_31662_cov_42.3274 . three_prime_UTR 27841 28261 . + . ID=g6118.t1.utr3p1;Parent=g6118.t1 #PROT g6118.t1 g6118 MDAAEEFVEQEADISDLPNFRQYSTDFDLQYQASYYDQPHGGQGAHHSHQVPDVVRNFILYFHQCIYNQRVQEINSIYENSWNRLTERYYENGPWPSVQTVAPLVDNDRLFLTLYKELYYRHIYSKLQPSLEQRIESFENYCDLFEYIIKSPRGPVALELPNQWLWDIIDEFIYQFQSWCMYRSKLKNKSEDEMRFLKENKVIWDVHSVLNILHSLVNTSKINEQLEAYHAGRDPLAVAGEFGASPLYKMLGYFSIIGLCRLHCLFGDYHQALKIMGNIDLNKRGLYARVPACQITTYYYVGFAYLMLRRYQDAVRLFANILLFIQRTKQFHTKSYQYEQMMKRNEQMYALLAIAVTLCPQRIDDNVHQQLREKKLEKMLKMQRGDEATFEELFNSACPKFLQPVPPDYDGPRLNFGQEAYKLQVKLFLSEVRQQALLPTIRSYLKLYTTMPTIKLAEFLDMDDEQFRTHLLCYKHKTRNLVWAEGAPLSGSYGTSSDVDFFVDRDMIHISDAKVPRRYGEYFVRQIQKFEDIIRPKHK* # ORIGINAL: g6114.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 8756 12741 . + . ID=g6114;Name=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 8756 12741 . + . ID=g6114.t1;Parent=g6114;Name=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 8756 9124 . + . ID=g6114.t1.exon1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 8756 9124 . + 0 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 9265 9396 . + . ID=g6114.t1.exon2;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 9265 9396 . + 0 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 9530 9699 . + . ID=g6114.t1.exon3;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 9530 9699 . + 0 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 9828 9904 . + . ID=g6114.t1.exon4;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 9828 9904 . + 1 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 10220 10437 . + . ID=g6114.t1.exon5;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 10220 10437 . + 2 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 10606 10713 . + . ID=g6114.t1.exon6;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 10606 10713 . + 0 ID=cds.g6114.t1;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 10879 12741 . + . ID=g6114.t1.exon7;Parent=g6114.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 10879 12741 . + 0 ID=cds.g6114.t1;Parent=g6114.t1 #PROT g6114.t1 g6114 MASDILAGPSLPTEPSAHLHRGASGIDLMNSAPRRPSDTLTLSRALKDVDPVRALRLVRTQDAATRPLATASDLISSLTVMDDNETPRHVKRKKVKAVGNVLEWPAMKETQEHLDLIRRLVDQELEVCQCLTDRSVMDPQRFKIYRQAFERIVNKFVGFGALLAEIKREYDSAIEILEKQVEDAAKIGRKLQSCLAEAENIENVRAYRDFLQDKVDAEEETNKSLKSSLDHLRFTKGRAARQRRVVAILPNIGPRRRSSTMFHIDARQKLSSHAPPLSAGVDGMERQSSLQGRRPSRRTSAALHDAASMLSLSTNVHALVIELSKYKTTLEQLKRDEAKKFVPAHMRDTLTATLKERANTLEETLAANKKAKETRDILRRAFEAIRSLSDAPRASGHLGHLLGSHLVKPIRCAVSDVSLFASSAGSSINDVAAVGDDANNELVGSEPNSRSSRESLLDVDTPERAGIRTPSPTALNAYALDSSYLWASTTSSRFTNDDIMALLSDNPTSLPSLPITSGANIRSTVRLADTAAAVDCNASVNAPSIAAPPAPDIVVVAPDAHTHSSVGLPAPTAQTLPAHVTIHGTSAPGVGAPSNVSSTNTDGHKEKQSQSHTSETAHPVVSLHHSGSAESADKASGLPVALTKKGSAPQIDVTAAPRPPRKKSLSSSALPIPDSVRAAAMSQSTLGLSMNSATMLARPSSARGVKDDDTRRSFIGKGFGVGKGKDYRSAKASHDASPKTTSSKHPQAPSIGKKAGGAKKGKDAGKKKRKGKKTKGSGAVTPILDGKSPATDAKVEGTKSRKKKTKRTRTKPSDPKPKSLASSMDSKRRGADDAGAGTGTGAGTGDGTHPSGPPGKRRGRGRAVKASKVPDDDGKGAEGSDSSSDRSGSDDSSDDDDDDSDDDDDEEGSSDGSGAETADNASVYTASEINSDRTDATSVAGSQFGGSQYGGSEYGGSQYGASDNDDDDDASSEQDEKS* # ORIGINAL: g6113.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 4239 7857 . - . ID=g6113;Name=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 4239 7857 . - . ID=g6113.t1;Parent=g6113;Name=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 6634 7857 . - . ID=g6113.t1.exon1;Parent=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 6634 7857 . - 0 ID=cds.g6113.t1;Parent=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 5207 6505 . - . ID=g6113.t1.exon2;Parent=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 5207 6505 . - 0 ID=cds.g6113.t1;Parent=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 4239 5036 . - . ID=g6113.t1.exon3;Parent=g6113.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 4239 5036 . - 0 ID=cds.g6113.t1;Parent=g6113.t1 #PROT g6113.t1 g6113 MTLLDANGRKSTGGFCTCCESVYGSEVSVHTSLAGSPWITQNADEADFFFVPAYVACLVSTGARISGGGGVIIPDIRRTSVFLEEALAHIRTKYPYWDRRGGADHIWTFTPELGANLFGEDGFDKIRRSVFLVTNAQHSEHVYQPWKDIPIPGKYMMQPIYELQENAAEQERTGPLMFWGGTIANTTVPGSALRRYVKSHFAGEKGFLVIELAVGKKVAQTGTDSLLALRTSTFCLCMENLWAWTPCPYEAIFSGCIPVIVTDDLDLSFEGIVDWRDFSLRVSPLRISEVPAILRAVTHERIRELRAGLARVWRLFYFPDKYAPGHATDMVVQELQRRKLAARNTWIAPEGVRSDGTAEMRIGGFGEEWGFEGAGNATNRRPAVDIGTRGERLMKAERLSRSQMVRSQVDCSVWDPLRVPTALVPRPNPRDKRYFCHGPARILGRRECAWPRGAEDIPLSDRAGYIRTTPLGRDFEVIPNAIRSQASRAKDASMITIAAQATVDRVYRHLLKLVLVWQGPVSLAVLVDDIVRDEGAVSALIQSQALLQRWVDVHFVRRRGHVAGDTGAYYPINTLRNIALDGVVTDWTMVLDIDVVPNACMRLFMAEVANAEKALARLYVEGGGSACPGLLAYIPPALEMPRAAASESLAIPSEGISEHDGILFPKRDAVRSLRAGGLRPMHMYFNLAYMPTDYPRWMGARAGQIYEVLYTVRFEPYFVARRDIPRFNESFVNRGGNFAQLVFHMYAAGYRFFVLPEVFTIDQPHDVSKRAPYMAQSRRMWDNFVYHVLKVYALTPAEDAMSPAYTRIETKLALEVAKFPNAKYDEDVAQQSPARKGSAAKEQVGEQFVLVISTDNNHMDRSRNVLQRYCAIPSLWGVVIIWNESAQRSVDQAAFAEGCDRVPVLFSPQASALPGNLFRPSNIPHDAPEGVFLVDTLAGSFGLPLSEDAVTFAFETWKGHRSQIVGFIPRAALWDAQDEAWKYGGIKDIVDTEHKYHFVLPSCAFIRKGHLDLLASSPENVLELVIAEPDCAEIALSIAVAKETQLPPVWVDAMTDATTEFAETPERVQARGECVRVFIAAYAAAVDGGGGFQPPTGKAIWRQELL* # ORIGINAL: g6115.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 13189 18767 . - . ID=g6115;Name=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 13189 18767 . - . ID=g6115.t1;Parent=g6115;Name=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 18091 18767 . - . ID=g6115.t1.exon1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 18091 18767 . - 0 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 17614 17910 . - . ID=g6115.t1.exon2;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 17614 17910 . - 1 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 17378 17480 . - . ID=g6115.t1.exon3;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 17378 17480 . - 1 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 17062 17182 . - . ID=g6115.t1.exon4;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 17062 17182 . - 0 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 16655 16755 . - . ID=g6115.t1.exon5;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 16655 16755 . - 2 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 16283 16415 . - . ID=g6115.t1.exon6;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 16283 16415 . - 0 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 15964 16027 . - . ID=g6115.t1.exon7;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 15964 16027 . - 2 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 15543 15685 . - . ID=g6115.t1.exon8;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 15543 15685 . - 1 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 15096 15245 . - . ID=g6115.t1.exon9;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 15096 15245 . - 2 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 14531 14745 . - . ID=g6115.t1.exon10;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 14531 14745 . - 2 ID=cds.g6115.t1;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 13189 14349 . - . ID=g6115.t1.exon11;Parent=g6115.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 13189 14349 . - 0 ID=cds.g6115.t1;Parent=g6115.t1 #PROT g6115.t1 g6115 MSGEAVKVAVRCRPFNQRERDRNAKVIIDMEGMQTMITNPSDPSDVKTFAFDFSYWSHDGYTEGSDGVMVEQPGGKYASQERVFRDLGQGVLDNAFAGYNCSLFAYGQTGSGKSYSMVGYGANKGIVPITCEHLFKTIEASKNPSIRFQVTFSMLEIYNEQVRDLLNAGGNPRGGLPIRQHPTKGFYVDGLRSVAVNSFAEIERRTDEGTRSRTVAATQMNATSSRAHTVVTITFEQIIKDDAGQETNKSSTINLVDLAGSERADSTGATGDRLKEGANINRSLTMLGNVISALAEKSSGKKNVLVPYRDSALTKLLQNALGGNSKTVMIAALSPADINYDETLSTLRYADRAKKIKNKAIVNENPTEKLIRELREENEKLKAMMSGESVPSDSGATDAEKEAIRKQLAEELQQQLNANERDLQKFKMSWEDKLKESREHFGPDAGADAGRTLKEPHILNLNEDPMLSGKVLFFVNKAACIVGKKDGDAVADIPLNGLSIQKKHAIIRNENGVVTISPGSVGARVLVNGIPLSTKQTLKHLDRLVFGSNHLFYFVNPDERKKLVEAGQSLPTVDYDFAQKELAQARGFGTDATKSQEDQKIQDEVVELLPMVTEVNAISEELNKQRSFEIVLLSSTAQNMGKMPVQRIASSMNIAGMPTVPTTRVMVKMKNLSNGNTWMWDKGKFTNRKFIMEELYQRFLDGEDVHGTHRDSDPFWEPPEDVLIGSASLYLKCLGYAMDIDEQVTVTDYKGAEEGTLEIQAIPCTEKGTPLDEDAFVDEPTDLLGKPYYLKLRVNRAEVKKARFAAGLHVKYAFFREENLTATATVRQTTTPEFNHVRLVTLPSVDPDIITFFDSGCIVFELWGTQTEEGDSAAAQRSSGMTTEEMMLRETNGNMGNPAAGANARKFVDLERDNTALRAEIAVLKRRGERMTRREKRVKELVKDLDAKPEAERDYAQFKRSVSAVYTGTTERLKAKIQVMMVGSKMLKARNSLGNLGMAAAAAAASPSAPATAPVTGGGTAAGGAAQPPKGGSHGPETHPGPSGAVKSQACVVQ* # ORIGINAL: g6116.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 20728 21231 . + . ID=g6116;Name=g6116.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 20728 21231 . + . ID=g6116.t1;Parent=g6116;Name=g6116.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 20728 20893 . + . ID=g6116.t1.exon1;Parent=g6116.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 20728 20893 . + 0 ID=cds.g6116.t1;Parent=g6116.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 21011 21231 . + . ID=g6116.t1.exon2;Parent=g6116.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 21011 21231 . + 2 ID=cds.g6116.t1;Parent=g6116.t1 #PROT g6116.t1 g6116 MVNAALKAEIEEAKMLHAEEERIASEFLHCRLRNMGVTCSVVCLVAFGIPFTLRKGTYGPLMGTFLVGTLLDYSIAHFYHCGEERKQVVAFHQRLTDSKKFPLPWEGRAAFKPRPAEIRQVMLYQLHP* # PASA_UPDATE: g6117.t1, single gene model update, valid-1, status:[pasa:asmbl_3399,status:12], valid-1 NODE_205_length_31662_cov_42.3274 . gene 21536 22705 . - . ID=g6117;Name=g6117.t1 NODE_205_length_31662_cov_42.3274 . mRNA 21536 22705 . - . ID=g6117.t1;Parent=g6117;Name=g6117.t1 NODE_205_length_31662_cov_42.3274 . five_prime_UTR 22644 22705 . - . ID=g6117.t1.utr5p1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . exon 22593 22705 . - . ID=g6117.t1.exon1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . CDS 22593 22643 . - 0 ID=cds.g6117.t1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . exon 22236 22489 . - . ID=g6117.t1.exon2;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . CDS 22236 22489 . - 0 ID=cds.g6117.t1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . exon 21978 22105 . - . ID=g6117.t1.exon3;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . CDS 21978 22105 . - 1 ID=cds.g6117.t1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . exon 21842 21883 . - . ID=g6117.t1.exon4;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . CDS 21842 21883 . - 2 ID=cds.g6117.t1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . exon 21536 21724 . - . ID=g6117.t1.exon5;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . CDS 21585 21724 . - 2 ID=cds.g6117.t1;Parent=g6117.t1 NODE_205_length_31662_cov_42.3274 . three_prime_UTR 21536 21584 . - . ID=g6117.t1.utr3p1;Parent=g6117.t1 #PROT g6117.t1 g6117 MVKIAIVYYSTYGHIQKLADSEKIGASSVEGVEVKVYQVQETLSDEVLGKMHAPPKPTDVPIATPDVLKEADGILFGFPTRFGTAPAQVKALFDSTGGLWQSGALVGKPAGVFFSSATQAGGQETTALTLVPYLVHQGLVFVPIGYSSPLLFNMDEVHGGSPYGAGTLAGPTGARLPSKLELDVAEHQGKYFANFVKALVKGRQ* # ORIGINAL: g6112.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 1677 3663 . - . ID=g6112;Name=g6112.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 1677 3663 . - . ID=g6112.t1;Parent=g6112;Name=g6112.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 3610 3663 . - . ID=g6112.t1.exon1;Parent=g6112.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 3610 3663 . - 0 ID=cds.g6112.t1;Parent=g6112.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 1677 3371 . - . ID=g6112.t1.exon2;Parent=g6112.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 1677 3371 . - 0 ID=cds.g6112.t1;Parent=g6112.t1 #PROT g6112.t1 g6112 MLHDRRDATPIIVLWESAVSRGSHGPQSNPARMRINDYFDRVFYINANASSRERDIMRALLRDAGIVGERITAVDPNNASVIARHNEFMATPPAYHEAKTGRRSLADRGDYANLLTFSSIIEIAIQRRYNRILILGENIRFHRSINDAFDGAVRTIPDDWKVLHLGAFQTSWDAQFIRWGSSSGEDESGSYYRTVGSTRGSFAVGIDSSVFHLVLFEAQKAAFPVDTGVLRAVGMVFPNSVIVMYPNLVIPTLLPRWIAGGKGANGGDLNDAVARRFRWDIALYAERPPPLPLPKVCVVVTMFNAADTIEYSVRSLLHQTYTNIEIIVVDDASEDEGPAIVTRMAEEDSRLLIVYNAQNKGAYASRNVGLQQCTGEIYINHDADDVSSPLRVWAQVLPLIDNRAEMTMATFIRTHLPIKRMHLPPAELFALANASRSHRHANGQFKYCCAEKLAFATLALKMEVFDRVGRFDETPFSGDAEFLERYFAMTFRTFLTEGTVNIHQYVRDIVALPPFYERIWETLYVAPDSVAGLSRVFAIGGDQRLEYRRKYQNRLLAWANPHAERLEDAFVRDAQQSEGDGG* # ORIGINAL: g6119.t1 original gene structure, not modified by PASA NODE_205_length_31662_cov_42.3274 AUGUSTUS gene 28621 31139 . - . ID=g6119;Name=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS mRNA 28621 31139 . - . ID=g6119.t1;Parent=g6119;Name=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 31075 31139 . - . ID=g6119.t1.exon1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 31075 31139 . - 0 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 30867 30947 . - . ID=g6119.t1.exon2;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 30867 30947 . - 1 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 30395 30557 . - . ID=g6119.t1.exon3;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 30395 30557 . - 1 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 30065 30172 . - . ID=g6119.t1.exon4;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 30065 30172 . - 0 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 29791 29860 . - . ID=g6119.t1.exon5;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 29791 29860 . - 0 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 29601 29702 . - . ID=g6119.t1.exon6;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 29601 29702 . - 2 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 29377 29424 . - . ID=g6119.t1.exon7;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 29377 29424 . - 2 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 29014 29135 . - . ID=g6119.t1.exon8;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 29014 29135 . - 2 ID=cds.g6119.t1;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS exon 28621 28749 . - . ID=g6119.t1.exon9;Parent=g6119.t1 NODE_205_length_31662_cov_42.3274 AUGUSTUS CDS 28621 28749 . - 0 ID=cds.g6119.t1;Parent=g6119.t1 #PROT g6119.t1 g6119 MSTLGKRDTPPGTVHIFAGGMSAFVSSILLQPFDVVKTRMQRGDNASGRGLLRTFGSVVGKEGAVGLWRGTLPTLYRTVPGVGIYFYSLDLTKRAITGLSSHQDDPRLSRSELVAAGGLARVWVVGLTLPFTVLKTRFESGLFSYTGMHDAMRRLFAQEGIAGFYRGFFATALRDAPFSGIYYASYEELKGLFETEGTMLAAMPVAARNMAAGFSAGLLATVVTHPPDVVRTRMQLFPALYSGTAAAISRIAREEGAAGFMRGMSARMLRRALMSAMTWTMYEEAMSRVARWAHG* # ORIGINAL: g6618.t1 original gene structure, not modified by PASA NODE_1065_length_14266_cov_41.8743 AUGUSTUS gene 13569 13943 . + . ID=g6618;Name=g6618.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS mRNA 13569 13943 . + . ID=g6618.t1;Parent=g6618;Name=g6618.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 13569 13691 . + . ID=g6618.t1.exon1;Parent=g6618.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 13569 13691 . + 0 ID=cds.g6618.t1;Parent=g6618.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 13848 13943 . + . ID=g6618.t1.exon2;Parent=g6618.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 13848 13943 . + 0 ID=cds.g6618.t1;Parent=g6618.t1 #PROT g6618.t1 g6618 MATVDANPWAAVEPFPYVSLGGIDKALALAHQMGYDVPSVQAPAESPSVALIHLLARVSAMREQLDKVREEC* # ORIGINAL: g6617.t1 original gene structure, not modified by PASA NODE_1065_length_14266_cov_41.8743 AUGUSTUS gene 923 12929 . - . ID=g6617;Name=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS mRNA 923 12929 . - . ID=g6617.t1;Parent=g6617;Name=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 12715 12929 . - . ID=g6617.t1.exon1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 12715 12929 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 12251 12392 . - . ID=g6617.t1.exon2;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 12251 12392 . - 1 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 11810 11983 . - . ID=g6617.t1.exon3;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 11810 11983 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 11155 11261 . - . ID=g6617.t1.exon4;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 11155 11261 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 10818 10983 . - . ID=g6617.t1.exon5;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 10818 10983 . - 1 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 9247 10556 . - . ID=g6617.t1.exon6;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 9247 10556 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 8750 9017 . - . ID=g6617.t1.exon7;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 8750 9017 . - 1 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 5949 8432 . - . ID=g6617.t1.exon8;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 5949 8432 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 5673 5756 . - . ID=g6617.t1.exon9;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 5673 5756 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 5347 5421 . - . ID=g6617.t1.exon10;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 5347 5421 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 4975 5128 . - . ID=g6617.t1.exon11;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 4975 5128 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 2525 4589 . - . ID=g6617.t1.exon12;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 2525 4589 . - 2 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 2214 2300 . - . ID=g6617.t1.exon13;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 2214 2300 . - 1 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 1945 2023 . - . ID=g6617.t1.exon14;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 1945 2023 . - 1 ID=cds.g6617.t1;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 923 1702 . - . ID=g6617.t1.exon15;Parent=g6617.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 923 1702 . - 0 ID=cds.g6617.t1;Parent=g6617.t1 #PROT g6617.t1 g6617 MKLFKSLGGGSKAAATPSGKDAGAGGLDSSLYEDIREKDLPKIHKAAWAGNGTELAALLKKGDPNQADARGRTALMLASIRGHTDCVNQLLKKGAIHAQDMNKHTPMMKAGLSAVPCILAVMGGHISVIQSLLASEVAGNERDVDGATGLIHAIVGGKFDIARLLVEQKSGLNGTDKHGNNALHICVKDNMPDLAKSIISAGIDVNAKNKESLTPLMLAAGACRMDMVEILLGAGANPAEKDGSGFTAVDHAFMRNLEFGNKLSERIDGRGDDDGADDDGSDGPHYAKPAPPAARGQPPKGAAMQPTLAGKTVSGKPDFLSNLLAQEYSDEDESADSRRDGSSARDPPPRGGQKANAPAQQKQLPQKQVAPTEPSKKKLPWERFSDEEDETDRTDRTRTESERSPLPARGKGSGSGTAAPAQPKGAVESKKAAPANSAGNAGQNSSVSQPQRKKLPWEHYDDAGDDESDQTERTESESPAKQPLDRRGAEQATQARGAASGVSGAASGVASGAAGKGASTPSADLGRRPDSARSGRSAATDGIDEDSDDFDMSGDDILHSDDDAGYAPTSRAAPVARAAAADHRDSLGAPKGVEKPPATSNAAAAATGTAGGGGGVEPDRDVSRDRLDKPVSSAPPIPDRVMSADKSSDKSIPTVAKGSAVTPSAAAPASSAPRADGSLQPPSVKPKQFFEPTVDRGEISDSFDSGDESDGPVALTPEVSVGLEAIAKAKQSLANQAQQFKPPSTPQAAGSTSAGSGSATKTAAAPTPSVVKAAADDKRGLGLNYGGHSDEEFGSEGLNDSNDSFNMPDDGDDDALSSLSRSRQQQKRAPSTVTEPVARTTNAPAPQTATSAAKTAAAPTTPAAKTAAAPTTSAAATKSFAPPARGGKSAPERDEESPSLWDSSDDGDDPPPVYGAAAKTSFGASAQKPAQAHPGGAGPRYSDILAANDELLGRTGASLSSEDLPSKAKAGASSDANVKRSSAPASQSQTRKEDRDKSQGEVSFGSDDDFDDDDGSDNAYLASVPSAKGGEPPKSASSKPVAAANPPERPQRIESLQPVGGEANTKLLPRESTGKNGGAVTDPLALRRGQSVEGRAVNVHAPLSTPAHATPLSPALGLAGSDTDLSRAKSPRLAPLALAGMSPCDAHSPDPFSRSSPLPIQSPPGLASALVRASPVARDLPPLAKSPSPVLASALPITHADVLVRRSEDVHTKPQVAPTPAAQSASKLESHAPQAPPSKHESEDVEEEYEESIASELSASEDDLLDSPPAAPAKRQSPPSSTNPSSNPNTARAVRGTPPVAVATPLSRQPAASSEPKERAPLLSATKQSAGDAALYESLHFGDDDPAAAAARAQVAQTSPTRATTSTMHTAPTTPAPRDSVRPAVAGVGPTSTPVHSSVVEPSVNADLADHNEDATYLEPTVLASSHKPPLASATVTAAGSGADSYMQPRASSSLGVDFTSPAVSLARAPSPYNRQYPLQTPPRSAGYSRYGGAVESPYAPLSRPMSAASYGASSLLSTGDYALPASRLHTAGSVGGSGGVGVGGSGSGGDASSADGPGGSGQEAAVSALREWLERERSLRMASERQVQSLKSQLYALETGDTRRLGDEIRSLRENLNRESELRHQAEHSCSKLDAEIEQYAQRLNEATTARGMAESQLGELDRQARRLVQQVQKEAELRAAAERLARESRANLDRSESRAGQAVKEKNASEFARKQLELALGNLQSTLANTERDVDELRRQLDSERAARESQGRILEEQARLRESLEEESRLSVMKKEEAFSHLEAADGAQKALRQRNEQLSREIAAMRSELAREKAAVVQIQRMSEKDMDDVRGKLESLLDQSQRNDAAFASARLSMEQEIDDQREQITSLVSMLDAERADLVRARTECDTLANHYNIAVAEGEAEARAREAAERELAAVRAEAVAARDVYEREVRLRESGLLQFAQRMNEIESARAMLEETGKTLRHDLDNAHVALATVERALPMAAEEDAPLRAPGASADREGDAGQKDMRTRAVAVAERVRQLLKESAVCKAELHSVRTRLENVEGSQQSLKERYEALVRTMEDAQAQERAVAETWRTSSNKELAHVTVELDRVRTEEEERTRELTSLRRDFDDVSRRWASADAALRSEAKAKDEAMQRLSVAEQELRGAREELRLLAGERSEMYTVSEILKGDLKAAHHERDKLRVDVESLKSHERNAAALQSALRASEEGYASEKNTTARLTAELDTLRKLLADATSSLSVLRMEVEELRVRLRAADAAVEEATRQSAEHKRMWEAEAKSRSRVGARMVALEKSAQQAKERAEKEIRDAELARQLQRETERRLDERRVAEEGREKDVRALKHHLSSTKQRLRALEAQTDEAKRTADTRLASAEKEMERERGSLEAENANLTRRVAQLVEELGREAQLRARADEGRSQADQKAERMQSQLSAQQSDIRTRAELEKENRRLERELKEYRERSLKKEDEFSHALEVARKEVEAKSRDEFAARLQDINKHLEDQSAAREQLERQRRESDAQQRQEMARLQQRYEGELERVVGELEVVVADRDACVADINRMSEMLDSERVHKGRMQERLERIRGRLAHTKAAAVNLAAAAAATSSLGDTQHQYTDRQAHVPTGAGGAGLGDSMYSVSSYGAAAAPHAYAPGSSHRAPFSGGTGQASGAHGSEASGFNPSLAAYGGGVGSYGAGRVASPYRPGVLSSTTAGVNSLRSSLRTFPAGSY* # ORIGINAL: g6616.t1 original gene structure, not modified by PASA NODE_1065_length_14266_cov_41.8743 AUGUSTUS gene 56 166 . + . ID=g6616;Name=g6616.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS mRNA 56 166 . + . ID=g6616.t1;Parent=g6616;Name=g6616.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS exon 56 166 . + . ID=g6616.t1.exon1;Parent=g6616.t1 NODE_1065_length_14266_cov_41.8743 AUGUSTUS CDS 56 166 . + 0 ID=cds.g6616.t1;Parent=g6616.t1 #PROT g6616.t1 g6616 CIIPVNRTQSATKICAVPMIRGAGYLIIVDILPGER* # PASA_UPDATE: g163.t1, single gene model update, valid-1, status:[pasa:asmbl_551,status:12], valid-1 NODE_1146_length_13554_cov_38.1729 . gene 8676 12836 . + . ID=g163;Name=g163.t1 NODE_1146_length_13554_cov_38.1729 . mRNA 8676 12836 . + . ID=g163.t1;Parent=g163;Name=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 8676 8975 . + . ID=g163.t1.exon1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 8676 8975 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 9313 9453 . + . ID=g163.t1.exon2;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 9313 9453 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 10170 10303 . + . ID=g163.t1.exon3;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 10170 10303 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 10448 10607 . + . ID=g163.t1.exon4;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 10448 10607 . + 1 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 10719 11318 . + . ID=g163.t1.exon5;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 10719 11318 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 11537 11651 . + . ID=g163.t1.exon6;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 11537 11651 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 11901 11986 . + . ID=g163.t1.exon7;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 11901 11986 . + 2 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 12238 12376 . + . ID=g163.t1.exon8;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 12238 12376 . + 0 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . exon 12583 12836 . + . ID=g163.t1.exon9;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . CDS 12583 12761 . + 2 ID=cds.g163.t1;Parent=g163.t1 NODE_1146_length_13554_cov_38.1729 . three_prime_UTR 12762 12836 . + . ID=g163.t1.utr3p1;Parent=g163.t1 #PROT g163.t1 g163 MPKIPGKESKSKVEDWMVDSVIGFLSSPLWTTPVMNFIEQQCIVFDNEDENKFVYTEIHEKYRKLIETLIEGYLEELKITPKQFLKACEKATPEHPQYDKVVFETVIAADDFLTFKQLMVAMNMSLEMQALKLLYELYGVVLDAADQATLMGMSPEDASRLGLNQRATDDRREEEEDILEEAIRLSKAAYERRMRDLDDETDEMRRVIEDSLAESERLARKAQRIQDEFDRELERAIRQSLLDAQTKALFVTEQRRRDTDEDSEDGKRRRHDDAVVSDDGSSDGESGTRRTDSRGKKRAGDSRSSPSKAKGRSADSDGDVASDSNSDDGVVVTSSMRDVSAQKHSARKTDKEREKERGKERDRDREGSGSKSSVAAGHRLPRPPSGRRGDKDEQNDGRRSRGDKESESDGELDYDDLIEGRSKPKRRSTGDSKSDRSDKASLFGKSSKDGSKSSKSPTTKAGALAPVRSAGAAGGNSRPTSAKGSATSNWLARAKEEAAVLEEHKKATGTTKAVSSGAGGDDLEVRARHLREQRDNLLEFKRQQREKVLQKYAEKNDVADLTESVRQRVEDVTDGDGVAGGKPSKEDEERMALRRALAMKLRQDVIETAQIGGGRKY* # ORIGINAL: g161.t1 original gene structure, not modified by PASA NODE_1146_length_13554_cov_38.1729 AUGUSTUS gene 1 5276 . - . ID=g161;Name=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS mRNA 1 5276 . - . ID=g161.t1;Parent=g161;Name=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 5085 5276 . - . ID=g161.t1.exon1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 5085 5276 . - 0 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 4740 4862 . - . ID=g161.t1.exon2;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 4740 4862 . - 0 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 4270 4412 . - . ID=g161.t1.exon3;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 4270 4412 . - 0 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 3535 4012 . - . ID=g161.t1.exon4;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 3535 4012 . - 1 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 2848 3216 . - . ID=g161.t1.exon5;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 2848 3216 . - 0 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 1434 2620 . - . ID=g161.t1.exon6;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 1434 2620 . - 0 ID=cds.g161.t1;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 1 1270 . - . ID=g161.t1.exon7;Parent=g161.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 1 1270 . - 1 ID=cds.g161.t1;Parent=g161.t1 #PROT g161.t1 g161 MSQGLDGVLVWFIGPAGYLIPGKVLSSAGGPSGTHNVQAEDGSQHTVKAAECRNVAESSINGVQDMTQLSDLHEGALLWNISKRYKNQDMYTYTGNILVAVNPYKVFNIYDLDTVRKYDGKVIGQLPPHIFAIANEAYQTMMTKAQDQCIVISGESGAGKTESTKLLMKFLAAINKEQSMISEQILESNPILESFGNAKTVRNNNSSRFGKYLELHFSPSGGIQGALMYEYLLEKSRIVHQGEGERNYHIFYELCLGLPPDDRARYRLSKPDDYYYLRQGGTCTVSNKDDSEDFFLQSRAMEVMGFKPEEMEVIYRILAAILHLGNCSFNKTSANGMDASAVSNQETSNFVAELLKLDKAGLNSSLTNRTNVTRGETMITPLSVDQALDKRDAMAKALYSRMFSWLVMRINQVVCKKSKKNSIGILDIFGFEDFKVNSFEQLCINYANEKLQFYFNQHIFKLEQEEYAKEGISWEKIEFVDNQECLDLIAKKPVGILAILDDESNFPKGSDEGFLEKLHKQHEKHAYYDKPKKRCPNFGVKHYAGLVSYDTTGFLDRNRDTLHQDLIDVVCASGEPFISSLFQYYKEDDGATVSKAGGGGGGAKKKRPTVGGQFHESLASLILIMSACNPFFVRCVKPNTEKVPDLFNHDLVLTQLRYSGMLETIRIRRSGFPVRLNFSYFVYRYRPLATAVLPQGEQVACKALVQMLPASLRDGAQMGKTKVFMRENVERELELQRGAKLKGVVTKIQKVARGFLARKRYRKMRNAIIAVQTIARGYLERRRKKHIINSVIKIQAFFRMVKPRKQYLRVREENRRKAAEARKKAQEVLARAAGDPSQVELPAQLKALIGSLPSFRAPVTESSFTSKATLPVDVYSYAIIPDGLPSYNFSKYAATFFNSERQGLICCQRSPITQPMTKMSSPALEAEAVMTFNCILKFAGDPAVAANPAMEQVIGNYVISRGIQFPELRDEVFAQLVNQTTENTNAGNAERVWLLLAMCIATFPPSEKLFNYLLSHITFNGKGNMANLCQYRLLRCQINGFRKLPPTPMEWMAAKKACPTSLDVTYADGSKSSIVVDSAATSGEAGRVAIEGKGIALGSGWTLEGDDDMAADDHVWDCIGARELLPQLVEQTRAGTAIASDSGLSGSGGAANLRRRASAAPPPPPGIKAPSAGPPGPPPPGPPKAPGGPPPPPVSAPPPPGPPPGPPGPPPPGPPKAPGPPPPPTSAPPPPGPPGPPPAGPPKAPGPPPPPTSA # ORIGINAL: g162.t1 original gene structure, not modified by PASA NODE_1146_length_13554_cov_38.1729 AUGUSTUS gene 6297 7667 . + . ID=g162;Name=g162.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS mRNA 6297 7667 . + . ID=g162.t1;Parent=g162;Name=g162.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS exon 6297 7667 . + . ID=g162.t1.exon1;Parent=g162.t1 NODE_1146_length_13554_cov_38.1729 AUGUSTUS CDS 6297 7667 . + 0 ID=cds.g162.t1;Parent=g162.t1 #PROT g162.t1 g162 MCSPSFLSLPIEVVAEHVTKYLGQRDLDALSRVNSILRSSLMRRRLFTLRTQVGKLFSTDATFRAEVLRVIPCDRIAIKIKHWRTPVDLTAFAGIYSLDIVGCSAVPSVSALSGLYAINLSTCGDVANVSALGGVHDLDLSGCERVVDVSALGRVHTLNLSGCRRVVDVSALREVHHLDLSGCERVVDVSALGGVHTLLLSNCRGISDVSALGRNFYLDLSFCSQISNVSSLGAVHTLNLAGCVGVFDVSALGRIHWLNLYGTHIFDVSALGGVHNLYLSHCLYIDDVSALGRVHVLDLTACTGVVDVSALGGVHTLNLTDCAGVANVSALGKVHTLTVNSNHVCDVSALGGVHTLDLSFCRQVVDVSALGSVYFLNLSGCPVIDVSGLGGVHTLILWKCTGVSDVSALGNVHTLNLSGCSGVVDVSALGSVTVLNLIGTRVADVSALGVRDLQWL* # PASA_UPDATE: g4079.t1, single gene model update, valid-1, status:[pasa:asmbl_32,status:12], valid-1 NODE_100_length_40362_cov_42.294 . gene 27294 29556 . - . ID=g4079;Name=g4079.t1 NODE_100_length_40362_cov_42.294 . mRNA 27294 29556 . - . ID=g4079.t1;Parent=g4079;Name=g4079.t1 NODE_100_length_40362_cov_42.294 . five_prime_UTR 29355 29556 . - . ID=g4079.t1.utr5p1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 29337 29556 . - . ID=g4079.t1.exon1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 29337 29354 . - 0 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 29024 29169 . - . ID=g4079.t1.exon2;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 29024 29169 . - 0 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 28659 28730 . - . ID=g4079.t1.exon3;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 28659 28730 . - 1 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 28328 28399 . - . ID=g4079.t1.exon4;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 28328 28399 . - 1 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 27876 27947 . - . ID=g4079.t1.exon5;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 27876 27947 . - 1 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 27563 27634 . - . ID=g4079.t1.exon6;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 27563 27634 . - 1 ID=cds.g4079.t1;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . exon 27294 27369 . - . ID=g4079.t1.exon7;Parent=g4079.t1 NODE_100_length_40362_cov_42.294 . CDS 27294 27369 . - 1 ID=cds.g4079.t1;Parent=g4079.t1 #PROT g4079.t1 g4079 MLVPYCMDSRIGAVVLLLVCGQFSYARAACPAECVCNGGAILSCSFSNPQSVTMLKWAEIEITSLPSGLFDQLTGLTTLDLSRNAISSLPNGIFDKLTSLTSLSLTINLLTVLPRGVFKNLAALNQLWMNSNTLQTFEAGVFDNLTSLNNLQFTKNRIDVLPNGLFDKLSALKYL* # ORIGINAL: g4078.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 19870 23357 . - . ID=g4078;Name=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 19870 23357 . - . ID=g4078.t1;Parent=g4078;Name=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 23064 23357 . - . ID=g4078.t1.exon1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 23064 23357 . - 0 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 22125 22806 . - . ID=g4078.t1.exon2;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 22125 22806 . - 0 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 21631 21839 . - . ID=g4078.t1.exon3;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 21631 21839 . - 2 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 21211 21325 . - . ID=g4078.t1.exon4;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 21211 21325 . - 0 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 20968 21016 . - . ID=g4078.t1.exon5;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 20968 21016 . - 2 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 20596 20787 . - . ID=g4078.t1.exon6;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 20596 20787 . - 1 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 20382 20432 . - . ID=g4078.t1.exon7;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 20382 20432 . - 1 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 20175 20257 . - . ID=g4078.t1.exon8;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 20175 20257 . - 1 ID=cds.g4078.t1;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 19870 20024 . - . ID=g4078.t1.exon9;Parent=g4078.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 19870 20024 . - 2 ID=cds.g4078.t1;Parent=g4078.t1 #PROT g4078.t1 g4078 MFGFGCQKYCACGAGSVGCDPAFGTCTCGFGWSGEFCNVIDPPSTPTVNATVEFDKQNGTVGIRLRWSHPEDTSSGVRAWLSWRYEIRRIGCAPTVFQVADVRDFLDTGVLIGRGYSYFVTAINSRDTPSLDSGLAGIDDVRTTLPPSPPRLVSVSAALTPDKLHPVITFAWAEDTSSGDILITFVFRDGVAIRSGLMGTEFNDMDIAFGTTYHYEVINTNAYGNSTATPITGISPESPSNGAIANTDTHATQAAGPIAGGVVGAIVGAATVAIAIQSVRRRASRKKEEALIRSELELIDCVVRRPEIVEIEIPASSIRMKHRIGAGEFGEVYMADVTLPGAVTPTRGAVKTFKILSSSLDEIRSARSAFMTEIDLMRSIPVHKNIVTLLGVCTQSEPTCMVLEFAAHGDLRSFFGESSSAEITPIDMLCFGIDIAGGMEHLAKYHIVHRDLAARNCMVFAGPRPSDAAESGWKLSPRGQVVVKVADMGLSKNVDSNDGDYYRAKTRRKLPVKWMAPESLRHGIATHASDVWSFGIVLWEIYSRGSKPYPGLQNHDVAAFLGQNKRMEAPGECPTLVKDVMEACWRKHPETRPQFAQVATQLRRAMAGL* # ORIGINAL: g4082.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 39091 40171 . + . ID=g4082;Name=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 39091 40171 . + . ID=g4082.t1;Parent=g4082;Name=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 39091 39209 . + . ID=g4082.t1.exon1;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 39091 39209 . + 0 ID=cds.g4082.t1;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 39389 39483 . + . ID=g4082.t1.exon2;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 39389 39483 . + 1 ID=cds.g4082.t1;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 39666 39753 . + . ID=g4082.t1.exon3;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 39666 39753 . + 2 ID=cds.g4082.t1;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 40078 40171 . + . ID=g4082.t1.exon4;Parent=g4082.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 40078 40171 . + 1 ID=cds.g4082.t1;Parent=g4082.t1 #PROT g4082.t1 g4082 MADDGASIADITFEDHVFDLAFHPTRDVVAAGLINGVVELHGYGIQGNTAISQLRNHRKACRALRFSADGNYLFTSGKDKSIQAVDMNTGVVAYAMQNAHSAPINSMVVVSESFIATGDDKGTIKVCAMCV* # ORIGINAL: g4075.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 5416 6969 . + . ID=g4075;Name=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 5416 6969 . + . ID=g4075.t1;Parent=g4075;Name=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 5416 5709 . + . ID=g4075.t1.exon1;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 5416 5709 . + 0 ID=cds.g4075.t1;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 6021 6293 . + . ID=g4075.t1.exon2;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 6021 6293 . + 0 ID=cds.g4075.t1;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 6527 6613 . + . ID=g4075.t1.exon3;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 6527 6613 . + 0 ID=cds.g4075.t1;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 6817 6969 . + . ID=g4075.t1.exon4;Parent=g4075.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 6817 6969 . + 0 ID=cds.g4075.t1;Parent=g4075.t1 #PROT g4075.t1 g4075 MTAGDNAASPASESAETILHTSAPESSSPTRDEEDGASTSVTVWSVQNDKLSLGKTASAHRVVGIPAACCFELMVETKRAFPLGRVECEMAVVDGRGDIVHRDNCVLTSRTQRTCLAFCTPAGTDGDGGAGGLHELRVYTRLRNGLFGPFSVNLSLAWVSMTTTARDGSRLNAAGARRRFHRRHTIEDTDYNLDDSIRRLSLTSPYNGFARSAGMTIPFLTLVSMHPRTLTAIARILGIKIAIGRGAADIDLDYHQAAWEIISVVTVS* # ORIGINAL: g4073.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 544 831 . - . ID=g4073;Name=g4073.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 544 831 . - . ID=g4073.t1;Parent=g4073;Name=g4073.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 544 831 . - . ID=g4073.t1.exon1;Parent=g4073.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 544 831 . - 0 ID=cds.g4073.t1;Parent=g4073.t1 #PROT g4073.t1 g4073 MAQQLDPFAAFEAQIKAVEAQIKAVEAQIVGVETVIAEINQQAKNLNEKIDQGTATAGDMKRFEIFSQKEAQLRTEKELVLREKERLRQGEDGAC* # PASA_UPDATE: g4077.t1, single gene model update, valid-1, status:[pasa:asmbl_31,status:3], valid-1 NODE_100_length_40362_cov_42.294 . gene 9159 19212 . - . ID=g4077;Name=g4077.t1 NODE_100_length_40362_cov_42.294 . mRNA 9159 19212 . - . ID=g4077.t1;Parent=g4077;Name=g4077.t1 NODE_100_length_40362_cov_42.294 . five_prime_UTR 18788 19212 . - . ID=g4077.t1.utr5p1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 18564 19212 . - . ID=g4077.t1.exon1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 18564 18787 . - 0 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 18329 18403 . - . ID=g4077.t1.exon2;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 18329 18403 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 18016 18087 . - . ID=g4077.t1.exon3;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 18016 18087 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 17685 17756 . - . ID=g4077.t1.exon4;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 17685 17756 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 17314 17385 . - . ID=g4077.t1.exon5;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 17314 17385 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 17012 17083 . - . ID=g4077.t1.exon6;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 17012 17083 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 16711 16782 . - . ID=g4077.t1.exon7;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 16711 16782 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 16461 16532 . - . ID=g4077.t1.exon8;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 16461 16532 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 16203 16274 . - . ID=g4077.t1.exon9;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 16203 16274 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 15805 15876 . - . ID=g4077.t1.exon10;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 15805 15876 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 15594 15665 . - . ID=g4077.t1.exon11;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 15594 15665 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 15382 15453 . - . ID=g4077.t1.exon12;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 15382 15453 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 15087 15158 . - . ID=g4077.t1.exon13;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 15087 15158 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 14855 14926 . - . ID=g4077.t1.exon14;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 14855 14926 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 14649 14726 . - . ID=g4077.t1.exon15;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 14649 14726 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 13760 14523 . - . ID=g4077.t1.exon16;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 13760 14523 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 13125 13549 . - . ID=g4077.t1.exon17;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 13125 13549 . - 2 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 12250 12928 . - . ID=g4077.t1.exon18;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 12250 12928 . - 0 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 11815 12026 . - . ID=g4077.t1.exon19;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 11815 12026 . - 2 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 11150 11264 . - . ID=g4077.t1.exon20;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 11150 11264 . - 0 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 10825 10873 . - . ID=g4077.t1.exon21;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 10825 10873 . - 2 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 10506 10697 . - . ID=g4077.t1.exon22;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 10506 10697 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 10223 10273 . - . ID=g4077.t1.exon23;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 10223 10273 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 9827 9909 . - . ID=g4077.t1.exon24;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 9827 9909 . - 1 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . exon 9159 9508 . - . ID=g4077.t1.exon25;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . CDS 9222 9508 . - 2 ID=cds.g4077.t1;Parent=g4077.t1 NODE_100_length_40362_cov_42.294 . three_prime_UTR 9159 9221 . - . ID=g4077.t1.utr3p1;Parent=g4077.t1 #PROT g4077.t1 g4077 MRIHSVRWPSNASRAALAMPKAAVRVHVVAFQLVVVITCCSLQSVSAVCPTSCVCVNNGLAVVSCAFSNTQVTSLSWTQLGLKSIPSGVFDALASTLTVLDLSVNDLSSIPDGLFDKLTKLTTLTLTLNSLTSLPIGLFNNLVALNDLSLSANKLTTIPLGTFDKLAALGLLKITNNLITSIPSGLFDKLPQLTYLDMSSNQLSSFPDKIFDKNPLLSSLRMSDNSITALQIGIFDNLAMLESIFLINNALTTLPAGLFDKLSLLTGLYLNGNQIATLPPGIFSKLSKLDFLYIKSNRINALPLGILDSLTVLRYFDISSNAITSLPAGILDKLANLTYFRFASNALSTLPRGLFDSCRSVKEIHLTSNSLVTLPSGIFDNFGQLSTINLASNAISSLPSGVFDKLPLLKVLDLSGNPGVKGSLCSNSPSHCINQTCSSCFCDAGWTGSSCATACAAGRAGPDCLVSCGCQNGAPCNRFTGVCKCATEWVGEKCTIPCPPNTFGVNCTNPCTCTNDAACDRLTGFCKCTAGWTGVACEKQCPSDLFGVNCTGVCACKNGATCDKVTGACTCTAGWTGARCDASCSSGKYGVNCTGTCTCLNGVCDRFTGMCVCAPGWMGAACDVACAFNQFGPDCTQPCTCGDSRPCDAVTGACSCTRASGYFGPSCLPCACAGTAVCDDGVAGSGVCNCSSLRGMGGAHCNTSCDQLPGAVRMYGNGCQSYCSCRNASSTFCDPVMGTCTCDLGWSGVVCDKITAPSTPHNVNATTVALSNRRVGIRLQWSHPDDVGVRAWTRWRHEIKRAGCFPETFHVGDEREFLDENVVVGMGYSYFITAFNSQNMSSPGSGLSGIENVKNVLPPAPPAVISSMATLTSDKLRPMVLFSWAEDTSSGSILQSFVSRDGVLLRSGLLGTEFIDADVVFGVTYVYQVVSVNSYGNSPFTLITVSVPNAPSNTTANSIAHTSAPPGPIAGGVVSAVVGSAIIVFAVQYMRGRVSRRKNDALIRSELDMIDAIVRRPEVAEIEIAASCIRIGNLIGEGEFGEVYVADVSLSDGASWITGAAKTFKVASRMNADEIRSSRSAFMAEINLMRSIPLNVNVVELLGVCTRTEPNCMVLEYASHGDLRRYVSDCKPSDLTSADLLCFAIDVARGMEHLAKCQIVHRDLAARNCMVFAGPRLPNPMEAGWTLSTKGRVIVKVADMGLSKDVGSSNGDYYVAKTKRKLPVKWMSQESLEKRIFTSASDVWSFGIVLWEIYSRGSKPYPGLQNHDVAAFLGQNKRMEAPDECPTLVKDVMEACWRKHPETRPQFAQVVIQLRRAMSSLCGLGSFKSTRMGSTLTLAVADPTHNGVYALTEPDEACASDSIDV* # ORIGINAL: g4076.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 7510 8541 . + . ID=g4076;Name=g4076.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 7510 8541 . + . ID=g4076.t1;Parent=g4076;Name=g4076.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 7510 8541 . + . ID=g4076.t1.exon1;Parent=g4076.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 7510 8541 . + 0 ID=cds.g4076.t1;Parent=g4076.t1 #PROT g4076.t1 g4076 MENCYRLDGSVRNRLCAQPRNRSVQNAELSIADAFSPSGLPYSNVTSTPSRDAPASGVTVGMSSASSLIASTPIASSLSRAGFDATVASPTVQLLAHVTTVELEAHDAADERAWRTMETAARRKAGLGGHVTWMYVAFPADRASNAGSYRFSSYNPDGVLTQRIVLSGESGEVPARTAAELATPCENGEHVPVATHIENVPDDSCNGGGVLRGGRSRSRAASAVRAGDWPPINPMRRTIVTSGEAAAVLARNLRAGSLPSVGGGREMKTTHSTKWRIGRWAARRVRRRAVNLVPSLATKALSAKVSWIALPIWVARRMLARMRPTPEVALDVVALIVCGYLVL* # ORIGINAL: g4080.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 30835 31656 . + . ID=g4080;Name=g4080.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 30835 31656 . + . ID=g4080.t1;Parent=g4080;Name=g4080.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 30835 30872 . + . ID=g4080.t1.exon1;Parent=g4080.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 30835 30872 . + 0 ID=cds.g4080.t1;Parent=g4080.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 31044 31656 . + . ID=g4080.t1.exon2;Parent=g4080.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 31044 31656 . + 1 ID=cds.g4080.t1;Parent=g4080.t1 #PROT g4080.t1 g4080 MDCPSLFPSTSLSDELDMCLSKLGIQAADIQQFLVYCLTLPSSDSSVQEEAFTTYTAPASPLMTQAPQVSSLEQQHIGTQGIPLISLPLKPTALHQEQHMYPARLSIVQRPNTGGRIPSGRRTSGYRRRTSEGDATRTPRQPGQWHCRAVSCGCDQRFTTTAARGMHEKRIVELLASEGWLDVTKGHLKSKQKELKHMFRQWANQLPLRLRALPSD* # PASA_UPDATE: g4074.t1, single gene model update, valid-1, status:[pasa:asmbl_33,status:12], valid-1 NODE_100_length_40362_cov_42.294 . gene 2475 4434 . + . ID=g4074;Name=g4074.t1 NODE_100_length_40362_cov_42.294 . mRNA 2475 4434 . + . ID=g4074.t1;Parent=g4074;Name=g4074.t1 NODE_100_length_40362_cov_42.294 . five_prime_UTR 2475 2550 . + . ID=g4074.t1.utr5p1;Parent=g4074.t1 NODE_100_length_40362_cov_42.294 . exon 2475 2614 . + . ID=g4074.t1.exon1;Parent=g4074.t1 NODE_100_length_40362_cov_42.294 . CDS 2551 2614 . + 0 ID=cds.g4074.t1;Parent=g4074.t1 NODE_100_length_40362_cov_42.294 . exon 2750 4434 . + . ID=g4074.t1.exon2;Parent=g4074.t1 NODE_100_length_40362_cov_42.294 . CDS 2750 4434 . + 2 ID=cds.g4074.t1;Parent=g4074.t1 #PROT g4074.t1 g4074 MTTAPVTAADLVTAAMVCLCAAALTSSAPISLSSVDAPVLKASDSILIAAKDNDPVLASRWSGYDIRTGATASQIPYQSQPAVQSDKLFTGKSQFSITTTSQEKATALETDISAGGGAFGVSVQSDFKYSNEEHSTDRHVSFQITVDKFTKSDRIQTPPPLTPDALRMIESNAGTFMSIYGTHFVIAKNRGCSFTMSGAYAFSDNSKAVEFHTSLKTSYSGVFDASFAASLDTKASSIDSQSSLEIVGAGDFEAEIATMVTDPFKLESWAQAALQWQSLCEQERESVGIKTFHVISWAEHPDISPKPQAEYMRAFDPAAAGTSSLLALAIRRQVTLLQRLRDARSFLSANGGPAASAPGYMTKLCDTVVTGPTPLAYSQLAAAITDVSAIAYYTADGLVESYVDDVQLAFFKYNPLLLSVTSEWKVTINAYSGATLNIPTNTVETAINTASPSFKQLDFGMVVNDGRDDTGYKTRFFQCGYGTPMEQCVHANFLGIGLTACQDGSACHGLNLAVIGSERNNYNEKGLYYKRNPLMDRWQVLPTDGQTYLYQLKNRNTDVNIVDWNFNIGAAPKLFGECNPFH* # ORIGINAL: g4081.t1 original gene structure, not modified by PASA NODE_100_length_40362_cov_42.294 AUGUSTUS gene 32327 38620 . - . ID=g4081;Name=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS mRNA 32327 38620 . - . ID=g4081.t1;Parent=g4081;Name=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 37981 38620 . - . ID=g4081.t1.exon1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 37981 38620 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 37144 37568 . - . ID=g4081.t1.exon2;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 37144 37568 . - 2 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 36850 36892 . - . ID=g4081.t1.exon3;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 36850 36892 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 36495 36663 . - . ID=g4081.t1.exon4;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 36495 36663 . - 2 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 35910 36096 . - . ID=g4081.t1.exon5;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 35910 36096 . - 1 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 35424 35563 . - . ID=g4081.t1.exon6;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 35424 35563 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 35087 35255 . - . ID=g4081.t1.exon7;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 35087 35255 . - 1 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 34713 34823 . - . ID=g4081.t1.exon8;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 34713 34823 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 34015 34248 . - . ID=g4081.t1.exon9;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 34015 34248 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 33673 33909 . - . ID=g4081.t1.exon10;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 33673 33909 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 33280 33364 . - . ID=g4081.t1.exon11;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 33280 33364 . - 0 ID=cds.g4081.t1;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS exon 32327 33123 . - . ID=g4081.t1.exon12;Parent=g4081.t1 NODE_100_length_40362_cov_42.294 AUGUSTUS CDS 32327 33123 . - 2 ID=cds.g4081.t1;Parent=g4081.t1 #PROT g4081.t1 g4081 MSAGGFVPDAKLEVLLQNNNLGRHFAVFVENEVDYDAFLCLSDENMAAMGIKIGPVAKLRRLIDALNGTGNPLVLPLSSPSSSVSSSVVSLHTPTSGGTAHAPATPRSGLSECGDFVWPADGSSSAPSGVSVASGSSQQAMPSSGLSQRGSTSLSEHDDSQATSVASSLFGTDVTSGASAGSSINGEAEKIPLNELQIGSSVLARGAQGSVYKGQFRNIQVAVKMVDRSDDKKEARMLASLRHENIVRFYGYCERSPNTYLVMEFADGGTLHSAIHNRVAWDNPGTAFRWLVEIARGMRYLHTEAPPDKGIVIHRDLKPENVLICGGTVKISDFGTSRQMQHTAKMSHVGTYSYMSPEALREEGYGVKGDVWGFGVTFWEIMVTHQPYAGLNPTQILYKVALQQLGLHVPTSLPPVLSALLGSCISWDPKLRPSFAEIVDHLEQRVLTSELVSLSPQSYAEMAQKWRDECVAFFMNVAPLSVEDASAVQSLSQRQQQVEDREKAFLEKICSDLQCCRTLVHFQVDVLGWGIAVEKRRRPTFTIMSCLDILSAGAFFRDKYRRASNRTVALTNWIPLFINEEHALRAQPYLEAALHSILTGREQATVLRDGVVTPEDSLEIFFTLMHQMVVPIVQEQEALTGRALDGFCSFHRWLLHYAELHPRLCEDCEERARAFLEAPVNRNKLSVPDLGKFMVLITLANVSWDQLVRPFVEESLSRQILWILKNDPTLCNALDVTWGAVYNDAETADIVQRCFARSTTGIRLILFIMHFCFKVARPPNSSRREIAMRYDEAFGSPSQQIKSSLQTAYREIMAISSYPEYFARVGYECPDVRPAALLALLRRSASLSAERKYHYWDVFRQQPTHHRQRGGDVGGTASVGLGGSGSGSGGAPGTSRKNGAGTYGQSSSGNGYARGNASGSNPRSASGQPDAQPLGHDSARNVHRSPHARQSGGGGGPGDHRHMSNASSQAWTNHSAQQSQARYSRRTSDGGVGGSDDVAVVGDVHAAPSGRSRATREQEWEVSSIGRSVDDGTVLAGDSPSAANATLTNASGVNGPSGRSYLSAVRGASTKGSPNARG* # ORIGINAL: g9557.t1 original gene structure, not modified by PASA NODE_961_length_15411_cov_40.8682 AUGUSTUS gene 4187 4843 . - . ID=g9557;Name=g9557.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS mRNA 4187 4843 . - . ID=g9557.t1;Parent=g9557;Name=g9557.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 4187 4843 . - . ID=g9557.t1.exon1;Parent=g9557.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 4187 4843 . - 0 ID=cds.g9557.t1;Parent=g9557.t1 #PROT g9557.t1 g9557 MQTFRAKAVLAIALVGLIACAFAAPVRVGMQRARRAPVPCDDYYGDCAGSQPEAEISTENNSGDFYGSDTVKPSADYGDYYGGDNTKPSADYGDYYGGSSDTPPVSQGDYYYGSASTDAPKPDKGGDYYGSASTDTPSGDYYGGEDSSSGDDNAGDYYGPTTTDAANGSTTDCTDYYGDCSSSTSGDGSSSDSGSLVITAGGAKAGFSVTLPDNSIGA* # PASA_UPDATE: g9556.t1, single gene model update, valid-1, status:[pasa:asmbl_10142,status:12], valid-1 NODE_961_length_15411_cov_40.8682 . gene 1712 3731 . - . ID=g9556;Name=g9556.t1 NODE_961_length_15411_cov_40.8682 . mRNA 1712 3731 . - . ID=g9556.t1;Parent=g9556;Name=g9556.t1 NODE_961_length_15411_cov_40.8682 . five_prime_UTR 3646 3731 . - . ID=g9556.t1.utr5p1;Parent=g9556.t1 NODE_961_length_15411_cov_40.8682 . exon 3014 3731 . - . ID=g9556.t1.exon1;Parent=g9556.t1 NODE_961_length_15411_cov_40.8682 . CDS 3014 3645 . - 0 ID=cds.g9556.t1;Parent=g9556.t1 NODE_961_length_15411_cov_40.8682 . exon 1712 2798 . - . ID=g9556.t1.exon2;Parent=g9556.t1 NODE_961_length_15411_cov_40.8682 . CDS 2141 2798 . - 1 ID=cds.g9556.t1;Parent=g9556.t1 NODE_961_length_15411_cov_40.8682 . three_prime_UTR 1712 2140 . - . ID=g9556.t1.utr3p1;Parent=g9556.t1 #PROT g9556.t1 g9556 MWAELRGQESDNWFCIIQKIRVEMGLADTSDAGRSSGLCKRRELETVLDCPLCLKPLCHPVTTMCGHNYCRFCLADALEHRNECPLCRSPCHMTSDHPVNVTLAKVIECALSSDCVKERSEEVRIDRREKRLKLPVFRDDLVQFPGAPLSLHLFEPRYRTLAKRCVEGNRRFAVVYRSPELVGAADDDDLTGRIGCLAEIKLSHETVDGRWFIHASGIRRIRVMETTREEDGLVYASCQEVDDTEIEAMERDVNNLSAREGRLSIGGGIGLRGPAGHPVFGPLMQRLQMAMLQYFDATLWSRMMPYQSIRARPFAKLPDKPEPMSYFVATTLAVTNKEKQRLLSAGTTRERMELEIEMLNALAAKDIALKRRVMRIIVFVIGLVLALVLVKSCVIAMYAPSASPALAASQSASIPQYEGAQIVLPLQAQ* # ORIGINAL: g9558.t1 original gene structure, not modified by PASA NODE_961_length_15411_cov_40.8682 AUGUSTUS gene 8068 10716 . + . ID=g9558;Name=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS mRNA 8068 10716 . + . ID=g9558.t1;Parent=g9558;Name=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 8068 8182 . + . ID=g9558.t1.exon1;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 8068 8182 . + 0 ID=cds.g9558.t1;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 8486 8668 . + . ID=g9558.t1.exon2;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 8486 8668 . + 2 ID=cds.g9558.t1;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 8834 9767 . + . ID=g9558.t1.exon3;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 8834 9767 . + 2 ID=cds.g9558.t1;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 10026 10095 . + . ID=g9558.t1.exon4;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 10026 10095 . + 1 ID=cds.g9558.t1;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 10309 10716 . + . ID=g9558.t1.exon5;Parent=g9558.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 10309 10716 . + 0 ID=cds.g9558.t1;Parent=g9558.t1 #PROT g9558.t1 g9558 MARSCRSVSAVLWAAVFFVVLGLTLADLCPGPINWLGDGTCQPSLNIPECDFDHGDCCSWSNKGPNAQTCGDGNICRCRADPTGCGTGCLNGGACVDNKCMCFKGWNGDQCQVSDSDVFITGLSALNSSPIRPGSRAIVSVDVTSGTDMFIVCKRCSVSDASTGSICTGPDMQRWDLATGNIGVEQISLFYDTFHETTTVQCRTENTQNVMSMNTLITVTDDPTLGLNPLPVRREVRQLTRGEWNQFAAAVNEMRRRGIYDYFTQVHVMASNHRLPNPGEDGCMAPASAVKCTNADRTAAHRGPTFFPWHREMLIQFEGALRMLSANASMAMPYWNWGITSPSLFSANYLGGSAADGLVNSGPFASWGIRRCVGCGGITPVSSAEIQSLLQLRSPYDAPPYQSFTGTFRDRLEGWQPFGFHNRMHSFCGGDMLTFSSPKDIAFYLIHSFTDRLFHTWMGLSGNSYRPVEGDSQAPSASVPSSAMFPWDTLISQVFSPIGYTYDTAPIVADSTTASRPSSVTTPKSNATATVVRSFRTNRIHPLWRVGNLRFRGVIVVDGSQKHSSTQQA* # ORIGINAL: g9560.t1 original gene structure, not modified by PASA NODE_961_length_15411_cov_40.8682 AUGUSTUS gene 13824 15366 . + . ID=g9560;Name=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS mRNA 13824 15366 . + . ID=g9560.t1;Parent=g9560;Name=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 13824 14546 . + . ID=g9560.t1.exon1;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 13824 14546 . + 0 ID=cds.g9560.t1;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 14794 15017 . + . ID=g9560.t1.exon2;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 14794 15017 . + 0 ID=cds.g9560.t1;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 15131 15251 . + . ID=g9560.t1.exon3;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 15131 15251 . + 1 ID=cds.g9560.t1;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 15364 15366 . + . ID=g9560.t1.exon4;Parent=g9560.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 15364 15366 . + 0 ID=cds.g9560.t1;Parent=g9560.t1 #PROT g9560.t1 g9560 MASRSVMLSLLVALLFAIQGTSAVMEDCVSDLAKIKAHTYPNGAMMILAATGKTIPMDAGNYGLCKTFSNARFFLARFTGAIGGERTIGGLGLCLPNSCDNEDVVEGINMAVIPGIESIGATLNLTNVSSPELDLVNSFDAGTIFAIVFFSLLLGLMVVATLFDLRRTVIRHYGKSINDGDEKLPLIAEEDDDARARAKKEAESRHASRGVQALLSFSVVANMPKLLAPAPASSFGMLNGMRVLSMAWVVLGHTVMQVLGLVGFQNLDAFSRSTKEWYFQFVLGGEYAVDSFFFISGFLVAYLLLKELRERDGRVNWGMFYFHRYWRLIPCVAVVLLFYFKISYHMGSGPFWYLYQ* # PASA_UPDATE: g9559.t1, single gene model update, valid-1, status:[pasa:asmbl_10143,status:12], valid-1 NODE_961_length_15411_cov_40.8682 . gene 11104 12307 . - . ID=g9559;Name=g9559.t1 NODE_961_length_15411_cov_40.8682 . mRNA 11104 12307 . - . ID=g9559.t1;Parent=g9559;Name=g9559.t1 NODE_961_length_15411_cov_40.8682 . five_prime_UTR 12220 12307 . - . ID=g9559.t1.utr5p1;Parent=g9559.t1 NODE_961_length_15411_cov_40.8682 . exon 12085 12307 . - . ID=g9559.t1.exon1;Parent=g9559.t1 NODE_961_length_15411_cov_40.8682 . CDS 12085 12219 . - 0 ID=cds.g9559.t1;Parent=g9559.t1 NODE_961_length_15411_cov_40.8682 . exon 11104 11990 . - . ID=g9559.t1.exon2;Parent=g9559.t1 NODE_961_length_15411_cov_40.8682 . CDS 11376 11990 . - 0 ID=cds.g9559.t1;Parent=g9559.t1 NODE_961_length_15411_cov_40.8682 . three_prime_UTR 11104 11375 . - . ID=g9559.t1.utr3p1;Parent=g9559.t1 #PROT g9559.t1 g9559 MCKGCAIPEHIKELPRGFINKAPRKEGQEYCPTLFEHWANTISHGIGIIFGVFALFLLLGLATTTAKLVSAWIYGVGMLCLFSASTSYHYAALAQLRRFLPVFQVMDHAVIYIFIAASYTPWLLILDLGQNNLWGKVMTAVVWSIAASGITLSLCVKHSPRVETIKLVLYVLMGWLAVFIYEPIMESPVPRVALLEMLFGGLCYTFGIAFFKSDGVIPCAHAIWHLFVLGGVLFHFHAVYHYLMIPLHI* # ORIGINAL: g9555.t1 original gene structure, not modified by PASA NODE_961_length_15411_cov_40.8682 AUGUSTUS gene 335 1644 . + . ID=g9555;Name=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS mRNA 335 1644 . + . ID=g9555.t1;Parent=g9555;Name=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 335 370 . + . ID=g9555.t1.exon1;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 335 370 . + 1 ID=cds.g9555.t1;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 597 860 . + . ID=g9555.t1.exon2;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 597 860 . + 1 ID=cds.g9555.t1;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 1104 1297 . + . ID=g9555.t1.exon3;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 1104 1297 . + 1 ID=cds.g9555.t1;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS exon 1523 1644 . + . ID=g9555.t1.exon4;Parent=g9555.t1 NODE_961_length_15411_cov_40.8682 AUGUSTUS CDS 1523 1644 . + 2 ID=cds.g9555.t1;Parent=g9555.t1 #PROT g9555.t1 g9555 DALAAVKEEVDRMFEESGGFFGREHLGGMVRMESAINEALRMCTSSLTIRQAMRDFELEIASNPGCAYKIRAGDQVLLFPLTTHLDPEVFEDPTTYKYDRFLNDERTECSRKFYKNGQPLSAALLPFGGGISMCPGRHFALNEIKLFVSYFLRYFDVKIGSGGGGNIAVPKLEQKRVGLGVLPPAQDIDYRMRLRPERDISLKH* # ORIGINAL: g12243.t1 original gene structure, not modified by PASA NODE_1967_length_8300_cov_43.5089 AUGUSTUS gene 2405 5441 . + . ID=g12243;Name=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS mRNA 2405 5441 . + . ID=g12243.t1;Parent=g12243;Name=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 2405 3718 . + . ID=g12243.t1.exon1;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 2405 3718 . + 0 ID=cds.g12243.t1;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 3894 4925 . + . ID=g12243.t1.exon2;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 3894 4925 . + 0 ID=cds.g12243.t1;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 5079 5256 . + . ID=g12243.t1.exon3;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 5079 5256 . + 0 ID=cds.g12243.t1;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 5362 5441 . + . ID=g12243.t1.exon4;Parent=g12243.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 5362 5441 . + 2 ID=cds.g12243.t1;Parent=g12243.t1 #PROT g12243.t1 g12243 MQEETLCGDDMYHCPKCKERREAVRQSLLTSLPRTLTLQLMRFVFDREAMSKRKIGDPVRFPDTLDLSQCVPARSLNIPEEDRGRLYTLSGILIHRGPSAYSGHYIAHVRSSWDGNWYRFDDEAVVRIPESAVGIEDDGEFLSDLLELEGRKGGKKGNKRKLAKLPKGFHESSSAYALVYTLESYPPQPANSATSLATGMEVDGKKAGGSIVAPMFADDVASDNAALDREIIDYKEKKEELLKFVEDLRAAAKEAYDLATHCVSPQSNSDLDLGAEIVSRSWLEAWIKRIFGPLPVASLPICNDSITCVHGKVDPLKRAEFKSISAEAANRIRMIDNRVADFTAKHAYVQAANSSSATSSTVGVDSAMEAQAREDNPIPAKPESAVTTSRLDGPRHVLPDALCRECTGRVWEWKRRQASITCDIDTVRQLIAGVRAVELTEPPVWIGRTLISAFYAMGKSKATGALTTCSEASASTESKEHAHDAAATTEMEIDCDSVNDAQCSHGNLSIHEKSRVLIPAQAFAMIGRWIPNVAHLAEGSLPCAVCEGGAQTAGVNADRRRYAASEQKVVLADILSALSSTVTDAPCAKTICPARVLKNADGPCVVIAVDRGFADDLRRFVRSPGRYEVPQYPPPSALLCRHGLLPYDPLDTAEFASRFVSLTEPEFGLLADFYPAMAACRIQLTLSLTKPFGVLHVHTCTPAACADCTAERKTNEASAAASLDDGWIFVRRVKSKLAVSQPAPDTGNGGDGQGRRPQRMAGGVRKKVFVSAKTTVRELKLEVMSLFTVAPFDQHIFRNGVELCDNAATLVSLGVPNDETLDLYVDEAMGNDEAMDAMRVDDTGLQDQREEGFRGEYLMRDAASVDG* # PASA_UPDATE: g12241.t1, single gene model update, valid-1, status:[pasa:asmbl_3131,status:12], valid-1 NODE_1967_length_8300_cov_43.5089 . gene 81 677 . - . ID=g12241;Name=g12241.t1 NODE_1967_length_8300_cov_43.5089 . mRNA 81 677 . - . ID=g12241.t1;Parent=g12241;Name=g12241.t1 NODE_1967_length_8300_cov_43.5089 . five_prime_UTR 600 677 . - . ID=g12241.t1.utr5p1;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . five_prime_UTR 490 509 . - . ID=g12241.t1.utr5p2;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . exon 600 677 . - . ID=g12241.t1.exon1;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . exon 447 509 . - . ID=g12241.t1.exon2;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . CDS 447 489 . - 0 ID=cds.g12241.t1;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . exon 81 266 . - . ID=g12241.t1.exon3;Parent=g12241.t1 NODE_1967_length_8300_cov_43.5089 . CDS 81 266 . - 2 ID=cds.g12241.t1;Parent=g12241.t1;3_prime_partial=true #PROT g12241.t1 g12241 MVWRPAGPNAKYGIAIYNFTANGPHQISLSVGEAVHIIEENSGWYRGFPIRNKTNHGVFPANYIHLKECTVKCGEG # ORIGINAL: g12242.t1 original gene structure, not modified by PASA NODE_1967_length_8300_cov_43.5089 AUGUSTUS gene 1025 2337 . + . ID=g12242;Name=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS mRNA 1025 2337 . + . ID=g12242.t1;Parent=g12242;Name=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 1025 1267 . + . ID=g12242.t1.exon1;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 1025 1267 . + 0 ID=cds.g12242.t1;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 1443 1584 . + . ID=g12242.t1.exon2;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 1443 1584 . + 0 ID=cds.g12242.t1;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 1686 1770 . + . ID=g12242.t1.exon3;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 1686 1770 . + 2 ID=cds.g12242.t1;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 1898 2039 . + . ID=g12242.t1.exon4;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 1898 2039 . + 1 ID=cds.g12242.t1;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS exon 2170 2337 . + . ID=g12242.t1.exon5;Parent=g12242.t1 NODE_1967_length_8300_cov_43.5089 AUGUSTUS CDS 2170 2337 . + 0 ID=cds.g12242.t1;Parent=g12242.t1 #PROT g12242.t1 g12242 MTSSKGRSALPGNGGAYAGAKRSGWEWIAEVGSPEGIVLRHLIDAYGLTVPPCGEGGTHGRSCKDNPNCLRGLGEKGKRAEVDIACLGVDPALNRRPENGLVGLKNFGATCYMNSLLQVLAKNYDMFVPLRSAILEYKSDEKDVASSVPLQLQRTFSYLGGSLRRCFAPASLCRALGIRDSEQQDAQEFSKLLLCLLESSIDSEKLSHSELSGTMAYVTKCKACNFRSKNDSKYYELEIPIAGKDLLTDAIRDHFKASL* # ORIGINAL: g2844.t1 original gene structure, not modified by PASA NODE_14578_length_248_cov_1046.58_potentialcontaminant AUGUSTUS gene 1 248 . - . ID=g2844;Name=g2844.t1 NODE_14578_length_248_cov_1046.58_potentialcontaminant AUGUSTUS mRNA 1 248 . - . ID=g2844.t1;Parent=g2844;Name=g2844.t1 NODE_14578_length_248_cov_1046.58_potentialcontaminant AUGUSTUS exon 1 248 . - . ID=g2844.t1.exon1;Parent=g2844.t1 NODE_14578_length_248_cov_1046.58_potentialcontaminant AUGUSTUS CDS 1 248 . - 2 ID=cds.g2844.t1;Parent=g2844.t1 #PROT g2844.t1 g2844 SVGSLSFGSGDWSVEQSVTVTAGAAAGTSEIVATATSLALGDAGEVAGQTFIVEVVQRPVVLIGSGGVRLHPGQSTTVGVRL # PASA_UPDATE: g11726.t1, single gene model update, valid-1, status:[pasa:asmbl_6731,status:12], valid-1 NODE_3920_length_2513_cov_34.2178 . gene 258 2231 . - . ID=g11726;Name=g11726.t1 NODE_3920_length_2513_cov_34.2178 . mRNA 258 2231 . - . ID=g11726.t1;Parent=g11726;Name=g11726.t1 NODE_3920_length_2513_cov_34.2178 . five_prime_UTR 2230 2231 . - . ID=g11726.t1.utr5p1;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . exon 1783 2231 . - . ID=g11726.t1.exon1;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . CDS 1783 2229 . - 0 ID=cds.g11726.t1;Parent=g11726.t1;5_prime_partial=true NODE_3920_length_2513_cov_34.2178 . exon 1226 1528 . - . ID=g11726.t1.exon2;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . CDS 1226 1528 . - 0 ID=cds.g11726.t1;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . exon 997 1104 . - . ID=g11726.t1.exon3;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . CDS 997 1104 . - 0 ID=cds.g11726.t1;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . exon 701 862 . - . ID=g11726.t1.exon4;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . CDS 701 862 . - 0 ID=cds.g11726.t1;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . exon 258 482 . - . ID=g11726.t1.exon5;Parent=g11726.t1 NODE_3920_length_2513_cov_34.2178 . CDS 258 482 . - 0 ID=cds.g11726.t1;Parent=g11726.t1 #PROT g11726.t1 g11726 SSDFVKDEDYGFLHQVLHGNLERIGVELSTNRVVSTGTAGRSAGAALRRPYDRLATLLAQLGPPPEVTKTTQLNLSMNAGSTAYEEFMSRYAKQKTDAIKQKNVFYQQGSSKAKRPVFYYVARRLFSDSADHELLIYYILVTLRPCVNKPFDLVLDMTLFGREHEPRPDWLQRLFTVAPPDSMKNLATVYVLNANPWLHQFSKRISRILAEAKAEKKFVFVDGLAKLGEFIAPNELHLPASTVSMEDGAKVYQNIMRLHANRGGRGAVTVRVGAEAIFITEAEKQKVFGVQAFVSDVFRAEDLEDAFRGADDAMHIKVEGGASDVVLSGPEMEALLGAVKTTLARGRLAKQQQQAVTSRKLRPSDVPGTMLNMALLNLGSGDPSLRLAAYNLLYALTGTFGFDIEGQLLEAKGA* # PASA_UPDATE: g5329.t1, single gene model update, valid-1, status:[pasa:asmbl_4579,status:12], valid-1 NODE_2577_length_5812_cov_39.3474 . gene 218 553 . - . ID=g5329;Name=g5329.t1 NODE_2577_length_5812_cov_39.3474 . mRNA 218 553 . - . ID=g5329.t1;Parent=g5329;Name=g5329.t1 NODE_2577_length_5812_cov_39.3474 . five_prime_UTR 513 553 . - . ID=g5329.t1.utr5p1;Parent=g5329.t1 NODE_2577_length_5812_cov_39.3474 . exon 499 553 . - . ID=g5329.t1.exon1;Parent=g5329.t1 NODE_2577_length_5812_cov_39.3474 . CDS 499 512 . - 0 ID=cds.g5329.t1;Parent=g5329.t1 NODE_2577_length_5812_cov_39.3474 . exon 218 363 . - . ID=g5329.t1.exon2;Parent=g5329.t1 NODE_2577_length_5812_cov_39.3474 . CDS 218 363 . - 1 ID=cds.g5329.t1;Parent=g5329.t1;3_prime_partial=true #PROT g5329.t1 g5329 MSFFGSKKKKPEAVDQKKYLETTHVGAKIVTGGLKSVVVLPPGEDVNEWLATN # PASA_UPDATE: g5330.t1, single gene model update, valid-1, status:[pasa:asmbl_4580,status:12], valid-1 NODE_2577_length_5812_cov_39.3474 . gene 802 5726 . + . ID=g5330;Name=g5330.t1 NODE_2577_length_5812_cov_39.3474 . mRNA 802 5726 . + . ID=g5330.t1;Parent=g5330;Name=g5330.t1 NODE_2577_length_5812_cov_39.3474 . five_prime_UTR 802 877 . + . ID=g5330.t1.utr5p1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 802 1017 . + . ID=g5330.t1.exon1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 878 1017 . + 0 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 1310 1508 . + . ID=g5330.t1.exon2;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 1310 1508 . + 1 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 1766 1968 . + . ID=g5330.t1.exon3;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 1766 1968 . + 0 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 2151 3092 . + . ID=g5330.t1.exon4;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 2151 3092 . + 1 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 3408 3554 . + . ID=g5330.t1.exon5;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 3408 3554 . + 1 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 3829 4058 . + . ID=g5330.t1.exon6;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 3829 4058 . + 1 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 4336 4579 . + . ID=g5330.t1.exon7;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 4336 4579 . + 2 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 4965 5103 . + . ID=g5330.t1.exon8;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 4965 5103 . + 1 ID=cds.g5330.t1;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . exon 5502 5726 . + . ID=g5330.t1.exon9;Parent=g5330.t1 NODE_2577_length_5812_cov_39.3474 . CDS 5502 5726 . + 0 ID=cds.g5330.t1;Parent=g5330.t1 #PROT g5330.t1 g5330 MAVARRRVHLLPAVAACVCVCVLALVAAVAAVDRSNFKTCDQSGFCKRNRNMATDQSLFKVLPESIKAHQTSMSMDLVNTQTSVLFTLDILLLDQSMVRFKVAEKTPLKPRYEVKDVVVGDAPGAPLDSVEENDGDFAVRSKDITVFVTHSPFRIDILHKEALVLRLNARGLMNFEHTRARDDGHDTAADGEGAWDESFKTHRDSKPNGPQSVAMDVTFTNFEHVYGIPEHASRLSLPSTKGPSITSDPYRLYNLDVFEYELDNPMALYGSIPFMVAHSETRTAGFFWLNAAETWVDVTHTQGASGTLGRLVSFMKGRSASTLPSVDTHWISESGIIDAYVLLGPTPTDVFRQYATLTGMPQLPPLFSIAYHQCRWNYNDQQDVASVDGNFDRNDIPYDVLWLDIEHTDGKRYFTWDYSKFPDPVAMQEVLAQKGRKMVTIVDPHIKRDSGYEVHSESESLGLYVKTTSGSSYEGWCWPGSSSWLDFTARNVRDWWAGRFALDKYKGSTTHLYIWNDMNEPSVFNGPEISMHKDAIHEGGWEHRDVHNVYGFYQHMATAQGLAKRSGYHRRPFVLSRAFFAGSQRHGAIWTGDNTADWDHLRASLPMIMSIGVAGLPFAGADVGGFFKNPDSQLLVRWYQTGAYTPFFRAHAHLDTRRREPWLFDDATTLAIRKAVIARYQLLPLFYTLFHEASVTGKPVMRPLWVEFPGDKATFGLQDAFLVGSSLLVKPVAEPNVQSVDVYLPGDQPWYDVDTYESFVKSAIVRTPLTKIPVFQRGGAIVVRKMRLRRSSALMDRDPYTLIVTLNLQVRARCWRMLPLSA* # ORIGINAL: g360.t1 original gene structure, not modified by PASA NODE_3353_length_3666_cov_35.5608 AUGUSTUS gene 301 3100 . + . ID=g360;Name=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS mRNA 301 3100 . + . ID=g360.t1;Parent=g360;Name=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS exon 301 377 . + . ID=g360.t1.exon1;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS CDS 301 377 . + 2 ID=cds.g360.t1;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS exon 569 656 . + . ID=g360.t1.exon2;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS CDS 569 656 . + 0 ID=cds.g360.t1;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS exon 896 1137 . + . ID=g360.t1.exon3;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS CDS 896 1137 . + 2 ID=cds.g360.t1;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS exon 1589 1781 . + . ID=g360.t1.exon4;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS CDS 1589 1781 . + 0 ID=cds.g360.t1;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS exon 2019 3100 . + . ID=g360.t1.exon5;Parent=g360.t1 NODE_3353_length_3666_cov_35.5608 AUGUSTUS CDS 2019 3100 . + 2 ID=cds.g360.t1;Parent=g360.t1 #PROT g360.t1 g360 RLSHNEKNEITRDLKTGSSKTSHLAKLPGRIRQVASVDSIQRLPRERGKEIALAGRSNVGKSTLVNLITRSKLAEVSDYPGTTRTLDFYQLPRLVVDDASSAEEKTLKTPKFIVDLPGYGFAFAKEEEKGAWHDLTRTYILTRSNLSRVYVLIDCRQGVTRLDREFLSFINKEGGPRFKIVLTKCDLLERSDLARRIYQVDNIIAEYRKAVPGILLVTANTLAGASYGGTQELMEDIVFTLAGVGSKRVLDSVMSPLEKKETAATATPEDADEVEHAPSFSRKTDGINSNSDTSETDEVSVGESQRRNNAQSQARRPRDGERPLKDAIGGAAGNRSMPNVAGARADLNINLDDLDDDMHLHARRRSEMQASESESMMRKAQASESEIAKKKPLGADTAAVTRGRQRGRSVSAEGPPAATITDNAKDFDVAKTALSDGHSGVGAKRKTMHDRNPEDTPRQKVESASQTPSPPKQAKASKGQRHREKAAERAEVYRTIASRRLAVPVGPQPGGSFSAWKEKKKLSATGGVVDGSGVAVTEAEGSLRQLKSPAQSARITRAK* # PASA_UPDATE: g10906.t1, single gene model update, valid-1, status:[pasa:asmbl_4087,status:3], valid-1 NODE_233_length_30131_cov_43.721 . gene 24565 25663 . + . ID=g10906;Name=g10906.t1 NODE_233_length_30131_cov_43.721 . mRNA 24565 25663 . + . ID=g10906.t1;Parent=g10906;Name=g10906.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 24565 24687 . + . ID=g10906.t1.utr5p1;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . exon 24565 24820 . + . ID=g10906.t1.exon1;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . CDS 24688 24820 . + 0 ID=cds.g10906.t1;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . exon 24901 25142 . + . ID=g10906.t1.exon2;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . CDS 24901 25142 . + 2 ID=cds.g10906.t1;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . exon 25234 25663 . + . ID=g10906.t1.exon3;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . CDS 25234 25551 . + 0 ID=cds.g10906.t1;Parent=g10906.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 25552 25663 . + . ID=g10906.t1.utr3p1;Parent=g10906.t1 #PROT g10906.t1 g10906 MGGVFTKSDEEYRISFVGLDAAGKTTALYKLKTGGDVVTTIPTIGFNVESVRYKNTLLDTWDMGGRGKMRVLWKYYLGGSSALIFMVDSNDRERFEDAQSELRSLLTLDDGLAPGCPVLVLANKQDLPFAASAEEVEHALELETVCEKHPWKVVKCCLRERTDEGIDEGMAWILSVVRNSGSAVPEHVPSRTKEDDNTGKLSKRTSKYDSNDSSKFSIVRTTRNFIKLVL* # ORIGINAL: g10900.t1 original gene structure, not modified by PASA NODE_233_length_30131_cov_43.721 AUGUSTUS gene 3666 4736 . - . ID=g10900;Name=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS mRNA 3666 4736 . - . ID=g10900.t1;Parent=g10900;Name=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 4684 4736 . - . ID=g10900.t1.exon1;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 4684 4736 . - 0 ID=cds.g10900.t1;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 4336 4478 . - . ID=g10900.t1.exon2;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 4336 4478 . - 1 ID=cds.g10900.t1;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 4079 4174 . - . ID=g10900.t1.exon3;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 4079 4174 . - 2 ID=cds.g10900.t1;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 3666 3886 . - . ID=g10900.t1.exon4;Parent=g10900.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 3666 3886 . - 2 ID=cds.g10900.t1;Parent=g10900.t1 #PROT g10900.t1 g10900 MEHHGILKRGPNDPHQKILKWDEDNLQRHEAAAGVEYGTMKIDEPKTPYQVYEPATDVDIPLELGDPLQPRSRVGSVEHLDAEDIAQRLGSSSRQRRVSVTSDTDDSDDSDGAHAEDDEDTKRKHAEFAKHRKEHYNMRAALLNKNFDDDEDDAAASKGEVDDLGSPMSE* # PASA_UPDATE: g10898.t1, single gene model update, valid-1, status:[pasa:asmbl_4077,status:12], valid-1 NODE_233_length_30131_cov_43.721 . gene 2 1864 . + . ID=g10898;Name=g10898.t1 NODE_233_length_30131_cov_43.721 . mRNA 2 1864 . + . ID=g10898.t1;Parent=g10898;Name=g10898.t1 NODE_233_length_30131_cov_43.721 . exon 2 109 . + . ID=g10898.t1.exon1;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . CDS 2 109 . + 0 ID=cds.g10898.t1;Parent=g10898.t1;5_prime_partial=true NODE_233_length_30131_cov_43.721 . exon 341 406 . + . ID=g10898.t1.exon2;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . CDS 341 406 . + 0 ID=cds.g10898.t1;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . exon 577 691 . + . ID=g10898.t1.exon3;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . CDS 577 691 . + 0 ID=cds.g10898.t1;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . exon 998 1099 . + . ID=g10898.t1.exon4;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . CDS 998 1099 . + 2 ID=cds.g10898.t1;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . exon 1431 1864 . + . ID=g10898.t1.exon5;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . CDS 1431 1585 . + 2 ID=cds.g10898.t1;Parent=g10898.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 1586 1864 . + . ID=g10898.t1.utr3p1;Parent=g10898.t1 #PROT g10898.t1 g10898 LPLQHGHPYISSMVNDGSLHYDHDADGTLTELAGCESQFRNVDHATRVRIMYIDRTVQVFLDTSNRNEWRQCFVVGGVDLPTGYYFGFSAATGQVADNHDIIAVKAVELPSQQAPAEVKVPHADFHAPLRERVDDDAGGMGDAIGSILNIVLYGTLVMVVLGAGIIYVRMKLRERANKRFY* # PASA_UPDATE: g10905.t1, single gene model update, valid-1, status:[pasa:asmbl_4070,status:3], valid-1 # PASA_UPDATE: g10905.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4069,status:3], valid-1 # PASA_UPDATE: g10905.t1.1.5b6bee86, alt-splice addition, valid-1, status:[pasa:asmbl_4071,status:24], valid-1 NODE_233_length_30131_cov_43.721 . gene 20062 24292 . - . ID=g10905;Name=g10905.t1 NODE_233_length_30131_cov_43.721 . mRNA 20062 23497 . - . ID=g10905.t1;Parent=g10905;Name=g10905.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 23399 23497 . - . ID=g10905.t1.utr5p1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . exon 23348 23497 . - . ID=g10905.t1.exon1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . CDS 23348 23398 . - 0 ID=cds.g10905.t1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . exon 22761 23243 . - . ID=g10905.t1.exon2;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . CDS 22761 23243 . - 0 ID=cds.g10905.t1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . exon 22298 22594 . - . ID=g10905.t1.exon3;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . CDS 22298 22594 . - 0 ID=cds.g10905.t1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . exon 21864 22158 . - . ID=g10905.t1.exon4;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . CDS 21864 22158 . - 0 ID=cds.g10905.t1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . exon 20062 21471 . - . ID=g10905.t1.exon5;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . CDS 20177 21471 . - 2 ID=cds.g10905.t1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 20062 20176 . - . ID=g10905.t1.utr3p1;Parent=g10905.t1 NODE_233_length_30131_cov_43.721 . mRNA 20062 23497 . - . ID=g10905.t1.1.5b6be70b;Parent=g10905;Name=g10905.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 23232 23497 . - . ID=g10905.t1.1.5b6be70b.utr5p1;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . exon 22761 23497 . - . ID=g10905.t1.1.5b6be70b.exon1;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . CDS 22761 23231 . - 0 ID=cds.g10905.t1.1.5b6be70b;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . exon 22298 22594 . - . ID=g10905.t1.1.5b6be70b.exon2;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . CDS 22298 22594 . - 0 ID=cds.g10905.t1.1.5b6be70b;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . exon 21864 22158 . - . ID=g10905.t1.1.5b6be70b.exon3;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . CDS 21864 22158 . - 0 ID=cds.g10905.t1.1.5b6be70b;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . exon 20062 21471 . - . ID=g10905.t1.1.5b6be70b.exon4;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . CDS 20177 21471 . - 2 ID=cds.g10905.t1.1.5b6be70b;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . three_prime_UTR 20062 20176 . - . ID=g10905.t1.1.5b6be70b.utr3p1;Parent=g10905.t1.1.5b6be70b NODE_233_length_30131_cov_43.721 . mRNA 20062 24292 . - . ID=g10905.t1.1.5b6bee86;Parent=g10905;Name=g10905.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 24142 24292 . - . ID=g10905.t1.1.5b6bee86.utr5p1;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . five_prime_UTR 23399 23993 . - . ID=g10905.t1.1.5b6bee86.utr5p2;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 24142 24292 . - . ID=g10905.t1.1.5b6bee86.exon1;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 23348 23993 . - . ID=g10905.t1.1.5b6bee86.exon2;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . CDS 23348 23398 . - 0 ID=cds.g10905.t1.1.5b6bee86;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 22761 23243 . - . ID=g10905.t1.1.5b6bee86.exon3;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . CDS 22761 23243 . - 0 ID=cds.g10905.t1.1.5b6bee86;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 22298 22594 . - . ID=g10905.t1.1.5b6bee86.exon4;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . CDS 22298 22594 . - 0 ID=cds.g10905.t1.1.5b6bee86;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 21864 22158 . - . ID=g10905.t1.1.5b6bee86.exon5;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . CDS 21864 22158 . - 0 ID=cds.g10905.t1.1.5b6bee86;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . exon 20062 21471 . - . ID=g10905.t1.1.5b6bee86.exon6;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . CDS 20177 21471 . - 2 ID=cds.g10905.t1.1.5b6bee86;Parent=g10905.t1.1.5b6bee86 NODE_233_length_30131_cov_43.721 . three_prime_UTR 20062 20176 . - . ID=g10905.t1.1.5b6bee86.utr3p1;Parent=g10905.t1.1.5b6bee86 #PROT g10905.t1 g10905 MPKHSHFDVGSCLFAAREAPKMLTDPQRQTVESAAGIGQASAARKSKSPQPAAGTRIPGALPPVIERPEKAHPPTASPASGSPTASPATSSGGAAPVAAPSSSLVSSVVGAGVPANALAGQKESGSAPSSAARRKDSTSSASRTPTVQMIGNYRLEKTIGKGNFAKVKLAKHVLTGEEVAVKIIEKAELNEASLAKLFREVRIMKLMDHPNIIKLYEVIDTPARLYLVLEYAAGGEVFDFLVAHGKMKEKEARSKFRQIVSAVQYCHAKHVIHRDLKAENLLLDADFNIKIADFGFSNMYTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTECEQLLKKFLQLTPARRATLEQVMDEPWMNEGYDAQNHLRPHVSPDANLDDDERIRIMERIGFSREEIKRSLREGSYDTAAATYHLLGRKSVADRRAIADVSGPPSAIPAMTASASESFSNSRPNSARSGMTAAHPQQPVRRTSQGQVPVQGPAVAGSTGAAGAAASGGERPVAPPSDRDRRVHRRRHTVGAKEPPEKDDKDVAPAPPPRTDVPKLRKRNSFGTEPAGAEPTPSASMGSSGSGTAARSSLESKSTPSRPSSTGPRLAASASAARHDEDHGGEEGDADMVGPTTVHTRDRERRGRSRRQTFHGDVKVPLLSQLKARFTRNNSRSEEKTKPRSLRFTFSMQTTSAKPAEDIIEEIKRVLGENNVAFVHPEPYLVECHLDDVQWEMEVCKLPRLSLNGVRLKRISGNSLSYKNICTKIISEIKL* #PROT g10905.t1.1.5b6be70b g10905 MLTDPQRQTVESAAGIGQASAARKSKSPQPAAGTRIPGALPPVIERPEKAHPPTASPASGSPTASPATSSGGAAPVAAPSSSLVSSVVGAGVPANALAGQKESGSAPSSAARRKDSTSSASRTPTVQMIGNYRLEKTIGKGNFAKVKLAKHVLTGEEVAVKIIEKAELNEASLAKLFREVRIMKLMDHPNIIKLYEVIDTPARLYLVLEYAAGGEVFDFLVAHGKMKEKEARSKFRQIVSAVQYCHAKHVIHRDLKAENLLLDADFNIKIADFGFSNMYTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTECEQLLKKFLQLTPARRATLEQVMDEPWMNEGYDAQNHLRPHVSPDANLDDDERIRIMERIGFSREEIKRSLREGSYDTAAATYHLLGRKSVADRRAIADVSGPPSAIPAMTASASESFSNSRPNSARSGMTAAHPQQPVRRTSQGQVPVQGPAVAGSTGAAGAAASGGERPVAPPSDRDRRVHRRRHTVGAKEPPEKDDKDVAPAPPPRTDVPKLRKRNSFGTEPAGAEPTPSASMGSSGSGTAARSSLESKSTPSRPSSTGPRLAASASAARHDEDHGGEEGDADMVGPTTVHTRDRERRGRSRRQTFHGDVKVPLLSQLKARFTRNNSRSEEKTKPRSLRFTFSMQTTSAKPAEDIIEEIKRVLGENNVAFVHPEPYLVECHLDDVQWEMEVCKLPRLSLNGVRLKRISGNSLSYKNICTKIISEIKL* #PROT g10905.t1.1.5b6bee86 g10905 MPKHSHFDVGSCLFAAREAPKMLTDPQRQTVESAAGIGQASAARKSKSPQPAAGTRIPGALPPVIERPEKAHPPTASPASGSPTASPATSSGGAAPVAAPSSSLVSSVVGAGVPANALAGQKESGSAPSSAARRKDSTSSASRTPTVQMIGNYRLEKTIGKGNFAKVKLAKHVLTGEEVAVKIIEKAELNEASLAKLFREVRIMKLMDHPNIIKLYEVIDTPARLYLVLEYAAGGEVFDFLVAHGKMKEKEARSKFRQIVSAVQYCHAKHVIHRDLKAENLLLDADFNIKIADFGFSNMYTPGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTECEQLLKKFLQLTPARRATLEQVMDEPWMNEGYDAQNHLRPHVSPDANLDDDERIRIMERIGFSREEIKRSLREGSYDTAAATYHLLGRKSVADRRAIADVSGPPSAIPAMTASASESFSNSRPNSARSGMTAAHPQQPVRRTSQGQVPVQGPAVAGSTGAAGAAASGGERPVAPPSDRDRRVHRRRHTVGAKEPPEKDDKDVAPAPPPRTDVPKLRKRNSFGTEPAGAEPTPSASMGSSGSGTAARSSLESKSTPSRPSSTGPRLAASASAARHDEDHGGEEGDADMVGPTTVHTRDRERRGRSRRQTFHGDVKVPLLSQLKARFTRNNSRSEEKTKPRSLRFTFSMQTTSAKPAEDIIEEIKRVLGENNVAFVHPEPYLVECHLDDVQWEMEVCKLPRLSLNGVRLKRISGNSLSYKNICTKIISEIKL* # ORIGINAL: g10901.t1 original gene structure, not modified by PASA NODE_233_length_30131_cov_43.721 AUGUSTUS gene 5320 7178 . + . ID=g10901;Name=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS mRNA 5320 7178 . + . ID=g10901.t1;Parent=g10901;Name=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 5320 5388 . + . ID=g10901.t1.exon1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 5320 5388 . + 0 ID=cds.g10901.t1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 5674 5825 . + . ID=g10901.t1.exon2;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 5674 5825 . + 0 ID=cds.g10901.t1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 5959 6062 . + . ID=g10901.t1.exon3;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 5959 6062 . + 1 ID=cds.g10901.t1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 6179 6283 . + . ID=g10901.t1.exon4;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 6179 6283 . + 2 ID=cds.g10901.t1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 6398 6803 . + . ID=g10901.t1.exon5;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 6398 6803 . + 2 ID=cds.g10901.t1;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 6941 7178 . + . ID=g10901.t1.exon6;Parent=g10901.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 6941 7178 . + 1 ID=cds.g10901.t1;Parent=g10901.t1 #PROT g10901.t1 g10901 MEPLMERLLSSHKDELITLESGRIQAVLTKHEMPPRADVVSAYLASAKYVRVKGKSAYDYDKHLPHIAPHKADGNLLFCKLTRRVINRRPDEVERHVNGKRFKRLLAKLESGDGDTKNVSDEELWVPEEFVEVERRSKRRELACIGMEDEMEDDVGSGTDGADALSDGDSDAGSAADGDDTPDGDGAAAASEEDEDIYPADGPLRPPRKRKGRDDDAIASDDDSDAIEESGDDSGSGDEVEGEMDLGGGKHSDDSGDSEESADSDDSGAPKKKGKRNSSGVQRTGKGTRGVRGARGTSGDSRGGSSGRGFSPRGGNGGNRGRGGSQRSGSGGGADAPPAKRRNTGPDQSGRGRRRDA* # PASA_UPDATE: g10899.t1, single gene model update, valid-1, status:[pasa:asmbl_4078,status:3], valid-1 NODE_233_length_30131_cov_43.721 . gene 2178 4034 . + . ID=g10899;Name=g10899.t1 NODE_233_length_30131_cov_43.721 . mRNA 2178 4034 . + . ID=g10899.t1;Parent=g10899;Name=g10899.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 2178 2274 . + . ID=g10899.t1.utr5p1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . exon 2178 2504 . + . ID=g10899.t1.exon1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . CDS 2275 2504 . + 0 ID=cds.g10899.t1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . exon 2680 2763 . + . ID=g10899.t1.exon2;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . CDS 2680 2763 . + 1 ID=cds.g10899.t1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . exon 2884 2953 . + . ID=g10899.t1.exon3;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . CDS 2884 2953 . + 1 ID=cds.g10899.t1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . exon 3141 3249 . + . ID=g10899.t1.exon4;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . CDS 3141 3249 . + 0 ID=cds.g10899.t1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . exon 3462 4034 . + . ID=g10899.t1.exon5;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . CDS 3462 3475 . + 2 ID=cds.g10899.t1;Parent=g10899.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 3476 4034 . + . ID=g10899.t1.utr3p1;Parent=g10899.t1 #PROT g10899.t1 g10899 MSHHDAVHSSGVGAGTATAGAHVLSADGAAPTQEPNPIERLGDALRDRERLWPIAAVFDAQGRVLASTFDVEPAEIDQLVHAFDGHDITVTRGIDFDGAHFDVHRYYDNIMYGREPFGTEGDGFAMSKTIVASSRQPVFAIVSFPPTVLTAQAVPELRRFCQNYVETL* # PASA_UPDATE: g10903.t1, single gene model update, valid-1, status:[pasa:asmbl_4067,status:12], valid-1 NODE_233_length_30131_cov_43.721 . gene 11240 13508 . - . ID=g10903;Name=g10903.t1 NODE_233_length_30131_cov_43.721 . mRNA 11240 13508 . - . ID=g10903.t1;Parent=g10903;Name=g10903.t1 NODE_233_length_30131_cov_43.721 . exon 13377 13508 . - . ID=g10903.t1.exon1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . CDS 13377 13508 . - 0 ID=cds.g10903.t1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . exon 13121 13240 . - . ID=g10903.t1.exon2;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . CDS 13121 13240 . - 0 ID=cds.g10903.t1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . exon 12789 12824 . - . ID=g10903.t1.exon3;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . CDS 12789 12824 . - 0 ID=cds.g10903.t1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . exon 11627 12631 . - . ID=g10903.t1.exon4;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . CDS 11627 12631 . - 0 ID=cds.g10903.t1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . exon 11240 11435 . - . ID=g10903.t1.exon5;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . CDS 11358 11435 . - 0 ID=cds.g10903.t1;Parent=g10903.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 11240 11357 . - . ID=g10903.t1.utr3p1;Parent=g10903.t1 #PROT g10903.t1 g10903 MMGCATPGHLRCLLAVSLCAVLLCALASPCVAGIREETEQCFCKLNGIVEDCCCDVEAVNDLNNNQVYPLVRQLVNSTFFRFYKADLPPGIRATLKTVSSSPAPASAPACSPSPVNPLDEVNATLSEGDRESIESWTAHDELANPFCDVGDDNSADSEYANLLLNPERFTGYDGVGAARIWDSIYRENCFMSQPETTTTAASSPFSLVPDGECLEKRVFYRLLSGLHASISVHICHNFLDRWTGTWGPNPREFARRFSPATTNGEGPKRLKNIYFAYLLVLRAVTKAADIWEQHSFFTGDDASDALAQSIVRELSFKGRACPSTFDERIMFAGADATVLREQFKDKFRNISRIMDCVGCDKCRLWGKLQVHGLGVALHILFSSPADKPAGSEAPARQTRLALARNDIVALFNVLGRLSSSVRALHEFRTLEDSPFWDRDNQRESIPFWSGGAPRAP* # ORIGINAL: g10902.t1 original gene structure, not modified by PASA NODE_233_length_30131_cov_43.721 AUGUSTUS gene 7722 10920 . + . ID=g10902;Name=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS mRNA 7722 10920 . + . ID=g10902.t1;Parent=g10902;Name=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 7722 7847 . + . ID=g10902.t1.exon1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 7722 7847 . + 0 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 8032 8124 . + . ID=g10902.t1.exon2;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 8032 8124 . + 0 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 8310 8462 . + . ID=g10902.t1.exon3;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 8310 8462 . + 0 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 8732 8884 . + . ID=g10902.t1.exon4;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 8732 8884 . + 0 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 9014 9140 . + . ID=g10902.t1.exon5;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 9014 9140 . + 0 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 9340 9505 . + . ID=g10902.t1.exon6;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 9340 9505 . + 2 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 9583 9767 . + . ID=g10902.t1.exon7;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 9583 9767 . + 1 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 10003 10194 . + . ID=g10902.t1.exon8;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 10003 10194 . + 2 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 10330 10407 . + . ID=g10902.t1.exon9;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 10330 10407 . + 2 ID=cds.g10902.t1;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 10550 10920 . + . ID=g10902.t1.exon10;Parent=g10902.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 10550 10920 . + 2 ID=cds.g10902.t1;Parent=g10902.t1 #PROT g10902.t1 g10902 MNLAYVGLSSALTALVVAHTYVQKEQFYPTVVQITRSSGSMMVMYNMALVLVVLFGKIMQRLFFGQLRAIEVEHLYERSWYAVTETCLAMSIFRDEFNSNFVVFFTVLLFLKIFHWLAQDRVDFMEQSPGVSWLFYSRTVAVITVLAVLDAWFVYHAVTYSLVKGPSMQLLFGFEFIVLSTMLVTTFFKFIMHTIDLQSEHPWDNKSTYVFYLELTMDFVRLIVYVLFFAIVYKYYGMPLHIVRDLYMTFRSFVKRVNDFFQYRRATANMNQRYPDATREELASVDNTCIICREEMTSAKRLPCGHVFHLHCLRSWLERQQTCPTCRAPVIQDAARATPSVGANAAANATPAVGTNAGSNAGAGVQVPSAAALGGVPSVQWTLPPGMGVPFPPPLAMQDGTPVAPPFVGFPPPFLPFSFLPPMNAEHLAPLQPLEELGEDELRAMEGREREHLARRIKFLREMQSHVSGIIARYAQYESLIASLPPPPVPIATPHVPTTDASGSGLSEPRDAPVHGAEGTRADNEDVPDVEGVRQRRMERFGAGRGL* # ORIGINAL: g10907.t1 original gene structure, not modified by PASA NODE_233_length_30131_cov_43.721 AUGUSTUS gene 27107 30032 . + . ID=g10907;Name=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS mRNA 27107 30032 . + . ID=g10907.t1;Parent=g10907;Name=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 27107 27508 . + . ID=g10907.t1.exon1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 27107 27508 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 27702 27845 . + . ID=g10907.t1.exon2;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 27702 27845 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 28018 28125 . + . ID=g10907.t1.exon3;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 28018 28125 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 28452 28677 . + . ID=g10907.t1.exon4;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 28452 28677 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 28773 28870 . + . ID=g10907.t1.exon5;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 28773 28870 . + 2 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 29069 29272 . + . ID=g10907.t1.exon6;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 29069 29272 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS exon 29479 30032 . + . ID=g10907.t1.exon7;Parent=g10907.t1 NODE_233_length_30131_cov_43.721 AUGUSTUS CDS 29479 30032 . + 0 ID=cds.g10907.t1;Parent=g10907.t1 #PROT g10907.t1 g10907 MDEEAILVALDDENFVKRIDAIEQLRESVRRNNGQLLCGNLKRLFSILRARMTDTVWNVRHQCMLLVVAAIPEFGPDLESAMAIVLPTLVVCLGDPKVVVRKAALQSLLLYVKHSGNVDALVTALVRSGLENENWRIRNECALAVISLLQDGPASADVTRLVDALVGRLRDVSDEVSASATQALEYLESVMGRGQFKAALDRLPQPLQQLYRSTIDSAGRPGSGQHAGGARAPVSQSRGAQDWTPAGERGPALAVTSSSQQSLRHSRGASVGATQNQQQQAAQGTAEQPGPSRVKEDVEFGFVSAEILRQLRDASNWKLRADAIEELHRVVGDLMDTGPLTRHLGDLLAFLTSLVDDPNFKIVLTTLQIIASVVNKVGLGIRAHLQTFVPSLIQRLGDSKIVIRQANVKVFNRLMQILTPRPVLAMLLSDLNHRNWHVREELVNTVIISLLTFQRFDFDYARISRDLAPMLDDPKSRVRLVAIEAYAVMAHIVGLQRYLLVLREASLSQAAMETLADRFNSRTLPHLNADGLIEHPGLARGMTPASPAIPFDADLDSSGDFGPGGTPRRNQSAGVVSA # PASA_UPDATE: g10904.t1, single gene model update, valid-1, status:[pasa:asmbl_4086,status:3], valid-1 NODE_233_length_30131_cov_43.721 . gene 15426 20061 . + . ID=g10904;Name=g10904.t1 NODE_233_length_30131_cov_43.721 . mRNA 15426 20061 . + . ID=g10904.t1;Parent=g10904;Name=g10904.t1 NODE_233_length_30131_cov_43.721 . five_prime_UTR 15426 15485 . + . ID=g10904.t1.utr5p1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 15426 15505 . + . ID=g10904.t1.exon1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 15486 15505 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 15592 15674 . + . ID=g10904.t1.exon2;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 15592 15674 . + 1 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 15781 15870 . + . ID=g10904.t1.exon3;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 15781 15870 . + 2 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 15993 16155 . + . ID=g10904.t1.exon4;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 15993 16155 . + 2 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 16331 16438 . + . ID=g10904.t1.exon5;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 16331 16438 . + 1 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 16621 16780 . + . ID=g10904.t1.exon6;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 16621 16780 . + 1 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 17001 17079 . + . ID=g10904.t1.exon7;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 17001 17079 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 17172 17224 . + . ID=g10904.t1.exon8;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 17172 17224 . + 2 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 17355 17495 . + . ID=g10904.t1.exon9;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 17355 17495 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 17663 17845 . + . ID=g10904.t1.exon10;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 17663 17845 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 17939 18016 . + . ID=g10904.t1.exon11;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 17939 18016 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 18147 18287 . + . ID=g10904.t1.exon12;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 18147 18287 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 18415 18756 . + . ID=g10904.t1.exon13;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 18415 18756 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 19042 19194 . + . ID=g10904.t1.exon14;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 19042 19194 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 19317 19623 . + . ID=g10904.t1.exon15;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 19317 19623 . + 0 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . exon 19832 20061 . + . ID=g10904.t1.exon16;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . CDS 19832 19980 . + 2 ID=cds.g10904.t1;Parent=g10904.t1 NODE_233_length_30131_cov_43.721 . three_prime_UTR 19981 20061 . + . ID=g10904.t1.utr3p1;Parent=g10904.t1 #PROT g10904.t1 g10904 MDRSVERRVTAPPTEDAASTQGGTSSDKSFKRSQALKYEVRLLESIDKERSPSVESVATCFAILGELLPYFGAFKRLMSMLRDEMQNAVYSREFTSAKTAPLFERIPYFVLVHRLNEERNESALALQREINAIKERLSARERELGQALEENAILQESSERLVATIASLQAELSQQGAALEAASESAEEANEKHRRETARLQDQLYSLMSELRDVRAKTEDMESYRQTYDALQRQDFNDDILQLTSRSNTEPLVVARNDLSEAEKLEEQLLELQNAEITEFESSIERQGLANGSEEAERKMESLQTYFRSNMSALANEIRLLRERRSALRELADELEAEDNSSGKYNFVPREKLSSKYALMIYTSTDNGRNFYALKDAAMCRGCDDRTVICTHKILKEKDVQLPRNCTHIKLCRPDVQPTPPRPVVQALGTPAKGGPLSAVSNPTISAASEYLGDGLVRLWEVYRRRSAPERERPRVLGEKRLVAFVSDFYTYLQWYESQSSVALQVPPTFEEHFYVLLEKRYVVKEIVDIVAYDILKAIEMYCADNKFVGLFALQLCGKMDAVCWKYLNLMHKFVLAFVPDHPKDYIRFARIVYPQLVAEELEQLTLEYVAWSENKISTQAMYEYVQHMMLRGTEPRFKHFVSALQKHDFLSRGWLSADDFGNAIEMMMPQVTEEKWSRYYLAGERNAAHKDQVAVERLAQIGAYFDLLHLEPQLQDPELFTREMDPHGHMHPLDHMDDRGGSPMGMLV* # ORIGINAL: g4725.t1 original gene structure, not modified by PASA NODE_3683_length_2965_cov_30.9104 AUGUSTUS gene 1 2488 . - . ID=g4725;Name=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS mRNA 1 2488 . - . ID=g4725.t1;Parent=g4725;Name=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 2390 2488 . - . ID=g4725.t1.exon1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 2390 2488 . - 0 ID=cds.g4725.t1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 1457 2280 . - . ID=g4725.t1.exon2;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 1457 2280 . - 0 ID=cds.g4725.t1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 1012 1254 . - . ID=g4725.t1.exon3;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 1012 1254 . - 1 ID=cds.g4725.t1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 605 750 . - . ID=g4725.t1.exon4;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 605 750 . - 1 ID=cds.g4725.t1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 407 459 . - . ID=g4725.t1.exon5;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 407 459 . - 2 ID=cds.g4725.t1;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS exon 1 279 . - . ID=g4725.t1.exon6;Parent=g4725.t1 NODE_3683_length_2965_cov_30.9104 AUGUSTUS CDS 1 279 . - 0 ID=cds.g4725.t1;Parent=g4725.t1 #PROT g4725.t1 g4725 MTAVVVRLYTQEQDAGWNYRIERVGCPIVPPVWRNGTSHGGILVDNNSVEPGQKYVYSITPFNPVASSINPEPFLLQSEPVQRTHPPDPPKITSIFASIEGNAPAVTITWTDDDVGLPIDQTLITRSDGVARNVTAHTTGTFVDSDVVPGVSYSYTLASWNAIGKSDTSLPSKEVTVRVSTSVVGASSSSAKTSAGAIAGAVVATIVGASASLGFMFWYRRRASRLKMEALIRSELELIDTVVQRPEIADLEIPIQCIRMRKNIGEGEFGEVYRAEVEVKGGQPTIAAVKTFKVTSLASADAVRSARSAFLGEIDLLRSVPKHRHVIELLGVCTQGEPNCMVMEFAEHGDVRQYVHKYGKELSAVDLLCFCIDIARGMEHLANSQIIHRAQVLVKIADFGLSRDSGDYYHAKTVGRKLPMKWMAPESLAKRIFTHSSDVWSYGVTAWEIFSKGDKPYLGIENRDLAAYLAQGRRLSAPEGCPVNVHAAMEACWRKHPETRPNFAQVVLMMRRAMHVLCTGVGGGAIDNSAANADAIPDASAQEVPALP # PASA_UPDATE: g7514.t1, single gene model update, valid-1, status:[pasa:asmbl_4330,status:12], valid-1 NODE_2448_length_6218_cov_40.0988 . gene 1742 4647 . + . ID=g7514;Name=g7514.t1 NODE_2448_length_6218_cov_40.0988 . mRNA 1742 4647 . + . ID=g7514.t1;Parent=g7514;Name=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 1742 2164 . + . ID=g7514.t1.exon1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 1742 2164 . + 0 ID=cds.g7514.t1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 2369 2468 . + . ID=g7514.t1.exon2;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 2369 2468 . + 0 ID=cds.g7514.t1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 2618 3024 . + . ID=g7514.t1.exon3;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 2618 3024 . + 2 ID=cds.g7514.t1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 3237 3536 . + . ID=g7514.t1.exon4;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 3237 3536 . + 0 ID=cds.g7514.t1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 3804 4124 . + . ID=g7514.t1.exon5;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 3804 4124 . + 0 ID=cds.g7514.t1;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . exon 4363 4647 . + . ID=g7514.t1.exon6;Parent=g7514.t1 NODE_2448_length_6218_cov_40.0988 . CDS 4363 4647 . + 0 ID=cds.g7514.t1;Parent=g7514.t1 #PROT g7514.t1 g7514 MPSANSVDTPATQVNMFYLCGGAKIVCVVTCGLFLANLWRCRRVAQRSEDAAKATRALHAVILPVFEPVLWCLMVALSAELLVFYFHIFWEFDPHKMSFWALFSGIREGFATLFLQRSITKNTLRRAAAASALFACFGVICGALSIIDHNGLPSLLIFYLTTVMFYLLVIFVFKRRRSVVLYAAVMAVHRITWCAYYCVTWAGDPDGAYVPFVVALTIVEVPFAYVIIVTMLLDTQYWRGLGRLAAAAPFAAGGHAPVTVCEDVVSAEFQRMVEENDSRAIDFACLSIDAVIAMGATSKVCKGRLRGKIVAVKVLTPSEITSSVVESFRRETAITASLRHEKVVTFYGFSVCPPTVSLVFEFCSRGSLFMALRLVSLWSPQRRMSAAHDAAEGVAYLHSRGLIHRDIKSMNFLVTEDFVVKITDFGVSRLVPTLCTTHDKPAPARARSLSVPQRASLRESDAEASLVEPREASPLLSAGGSERSESSGDGLPPDDDGDEYAYLLTRGMGTVLWQAPEMISGRPYDERCDVYSLAIVIAEIFSGEIPYESLGTKFAVQSHVLAGGRPGIPSDAPACVRSLLPRMWAESPRDRPSAADVVAVLEANFGIIASS* # ORIGINAL: g7513.t1 original gene structure, not modified by PASA NODE_2448_length_6218_cov_40.0988 AUGUSTUS gene 183 1296 . - . ID=g7513;Name=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS mRNA 183 1296 . - . ID=g7513.t1;Parent=g7513;Name=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 1129 1296 . - . ID=g7513.t1.exon1;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 1129 1296 . - 0 ID=cds.g7513.t1;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 702 1019 . - . ID=g7513.t1.exon2;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 702 1019 . - 0 ID=cds.g7513.t1;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 386 562 . - . ID=g7513.t1.exon3;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 386 562 . - 0 ID=cds.g7513.t1;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 183 287 . - . ID=g7513.t1.exon4;Parent=g7513.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 183 287 . - 0 ID=cds.g7513.t1;Parent=g7513.t1 #PROT g7513.t1 g7513 MADEAGAGGAPQPQLALYQSIIAGGTAGVVSRFVIAPFDVLKIRFQLQLEPIRRRKRLRRGDPLPKYRGLLQAVRTIVREEGTLALWKGNFAAELLYLTYGATQFAVYDTLTRVVGDVGGESAASDVLRSFLVGGTSGATATLASYPLDVLRTRMAAQGEPKIYPTLGSAVRHIWTSDGLRGFYRGYVPALLQIFPYMGLQFTSYGAFKAVGAWLKGSAHGTASLSNLELAVCGGAAGMSSKIAVLPLDIVKKRMQ # ORIGINAL: g7515.t1 original gene structure, not modified by PASA NODE_2448_length_6218_cov_40.0988 AUGUSTUS gene 4845 5958 . - . ID=g7515;Name=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS mRNA 4845 5958 . - . ID=g7515.t1;Parent=g7515;Name=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 5926 5958 . - . ID=g7515.t1.exon1;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 5926 5958 . - 0 ID=cds.g7515.t1;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 5532 5703 . - . ID=g7515.t1.exon2;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 5532 5703 . - 0 ID=cds.g7515.t1;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 5199 5268 . - . ID=g7515.t1.exon3;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 5199 5268 . - 2 ID=cds.g7515.t1;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS exon 4845 5055 . - . ID=g7515.t1.exon4;Parent=g7515.t1 NODE_2448_length_6218_cov_40.0988 AUGUSTUS CDS 4845 5055 . - 1 ID=cds.g7515.t1;Parent=g7515.t1 #PROT g7515.t1 g7515 MCLFSKRKTYPAIACLKRAAYLAPFEWSVAHNLGLVHLHNGQHASAFHFLSAAINLRPTHGRTYMLLAVALVHLEDHETAFLAYEKAAELSRDDPLVRLNHAISLYNSGQRKRAAKELSAFESAMDAPARKVEDEDADAVMRDTASRLGAVLQLGEQHVQR* # PASA_UPDATE: g11332.t1, single gene model update, valid-1, status:[pasa:asmbl_7029,status:13],[pasa:asmbl_7030,status:12], valid-1 NODE_4154_length_2104_cov_38.6269 . gene 157 1871 . + . ID=g11332;Name=g11332.t1 NODE_4154_length_2104_cov_38.6269 . mRNA 157 1871 . + . ID=g11332.t1;Parent=g11332;Name=g11332.t1 NODE_4154_length_2104_cov_38.6269 . five_prime_UTR 157 157 . + . ID=g11332.t1.utr5p1;Parent=g11332.t1 NODE_4154_length_2104_cov_38.6269 . exon 157 316 . + . ID=g11332.t1.exon1;Parent=g11332.t1 NODE_4154_length_2104_cov_38.6269 . CDS 158 316 . + 0 ID=cds.g11332.t1;Parent=g11332.t1;5_prime_partial=true NODE_4154_length_2104_cov_38.6269 . exon 816 1871 . + . ID=g11332.t1.exon2;Parent=g11332.t1 NODE_4154_length_2104_cov_38.6269 . CDS 816 1130 . + 0 ID=cds.g11332.t1;Parent=g11332.t1 NODE_4154_length_2104_cov_38.6269 . three_prime_UTR 1131 1871 . + . ID=g11332.t1.utr3p1;Parent=g11332.t1 #PROT g11332.t1 g11332 VSNHQDVPVDEFKANLREIAAYAVDTLGVPIANVVIVTPPRVDESVWNEYCLRVHGSPGTRRDANAKEYAIAAKAVADEIGASCADVYTAMEAEPDHTILLSDGLHLSKLGCAIVAKAVSYLSVPCVIGFSAVWRSVRVSVYVCTCERTVSSVRRGE* # PASA_UPDATE: g8789.t1, single gene model update, valid-1, status:[pasa:asmbl_9071,status:12],[pasa:asmbl_9076,status:12], valid-1 NODE_726_length_18545_cov_39.4195 . gene 11707 13108 . + . ID=g8789;Name=g8789.t1 NODE_726_length_18545_cov_39.4195 . mRNA 11707 13108 . + . ID=g8789.t1;Parent=g8789;Name=g8789.t1 NODE_726_length_18545_cov_39.4195 . five_prime_UTR 11707 11892 . + . ID=g8789.t1.utr5p1;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . exon 11707 11995 . + . ID=g8789.t1.exon1;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . CDS 11893 11995 . + 0 ID=cds.g8789.t1;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . exon 12202 12296 . + . ID=g8789.t1.exon2;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . CDS 12202 12296 . + 2 ID=cds.g8789.t1;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . exon 12587 13108 . + . ID=g8789.t1.exon3;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . CDS 12587 12670 . + 0 ID=cds.g8789.t1;Parent=g8789.t1 NODE_726_length_18545_cov_39.4195 . three_prime_UTR 12671 13108 . + . ID=g8789.t1.utr3p1;Parent=g8789.t1 #PROT g8789.t1 g8789 MFRNAAVRSVSLARLGASLTPKRNYVPNEVGSGEGRGGGSGGSIKSAGGAFGKREQAIEEQFFRKKSSEELKDLHDHPDHLKKPEHKETPKKK* # PASA_UPDATE: g8787.t1, single gene model update, valid-1, status:[pasa:asmbl_9075,status:3], valid-1 NODE_726_length_18545_cov_39.4195 . gene 2015 2757 . + . ID=g8787;Name=g8787.t1 NODE_726_length_18545_cov_39.4195 . mRNA 2015 2757 . + . ID=g8787.t1;Parent=g8787;Name=g8787.t1 NODE_726_length_18545_cov_39.4195 . five_prime_UTR 2015 2045 . + . ID=g8787.t1.utr5p1;Parent=g8787.t1 NODE_726_length_18545_cov_39.4195 . exon 2015 2757 . + . ID=g8787.t1.exon1;Parent=g8787.t1 NODE_726_length_18545_cov_39.4195 . CDS 2046 2558 . + 0 ID=cds.g8787.t1;Parent=g8787.t1 NODE_726_length_18545_cov_39.4195 . three_prime_UTR 2559 2757 . + . ID=g8787.t1.utr3p1;Parent=g8787.t1 #PROT g8787.t1 g8787 MAAVKVSLFRRAIAAVKAIANDYRTVFVELGQGARDHPFRTAAAATAAAGVLYVASQAPVERDYIAGIVDSHNRLAQVSAFTRRKESEAHVLSQMQLLHTGHIAVQDLGLFSVAYMREDPPWTRSARSKYGPLRYDTLSLESWRERIIDVGFMGRWWVLNDKMVDYDVQE* # PASA_UPDATE: g8791.t1, single gene model update, valid-1, status:[pasa:asmbl_9072,status:12], valid-1 NODE_726_length_18545_cov_39.4195 . gene 16981 18510 . + . ID=g8791;Name=g8791.t1 NODE_726_length_18545_cov_39.4195 . mRNA 16981 18510 . + . ID=g8791.t1;Parent=g8791;Name=g8791.t1 NODE_726_length_18545_cov_39.4195 . five_prime_UTR 16981 16991 . + . ID=g8791.t1.utr5p1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . exon 16981 17134 . + . ID=g8791.t1.exon1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . CDS 16992 17134 . + 0 ID=cds.g8791.t1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . exon 17243 17307 . + . ID=g8791.t1.exon2;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . CDS 17243 17307 . + 1 ID=cds.g8791.t1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . exon 17483 17611 . + . ID=g8791.t1.exon3;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . CDS 17483 17611 . + 2 ID=cds.g8791.t1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . exon 17749 17927 . + . ID=g8791.t1.exon4;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . CDS 17749 17927 . + 2 ID=cds.g8791.t1;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . exon 18244 18510 . + . ID=g8791.t1.exon5;Parent=g8791.t1 NODE_726_length_18545_cov_39.4195 . CDS 18244 18510 . + 0 ID=cds.g8791.t1;Parent=g8791.t1 #PROT g8791.t1 g8791 MKTTEGWVDPKEIETQQSRRFAPKRKMSSAYANVRVGKLRLKGEPEEQKKKKRKRKEGASKVEAVPLKHGKYWKVSGVEHLVGQVTFETAGEGRLLMLEEDETLVAAMVHEEEDNPPNALECFTAISPSPGQISLKAVTEKYVSSDKRGRVTADSDAVGQRETWDAIAAPDGGWCLRDCEGRFVRVLSTGKLLCENDDVNEAATFVIRSGMPPPVAKKSVDGEIIDDIGQFEANVMCVCAVCALGIPSNPWKAVCLNQSL* # PASA_UPDATE: g8790.t1, single gene model update, valid-1, status:[pasa:asmbl_9074,status:3], valid-1 NODE_726_length_18545_cov_39.4195 . gene 13398 16793 . - . ID=g8790;Name=g8790.t1 NODE_726_length_18545_cov_39.4195 . mRNA 13398 16793 . - . ID=g8790.t1;Parent=g8790;Name=g8790.t1 NODE_726_length_18545_cov_39.4195 . five_prime_UTR 16704 16793 . - . ID=g8790.t1.utr5p1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 16401 16793 . - . ID=g8790.t1.exon1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 16401 16703 . - 0 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 15804 16106 . - . ID=g8790.t1.exon2;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 15804 16106 . - 0 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 15452 15568 . - . ID=g8790.t1.exon3;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 15452 15568 . - 0 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 15184 15294 . - . ID=g8790.t1.exon4;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 15184 15294 . - 0 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 14849 14948 . - . ID=g8790.t1.exon5;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 14849 14948 . - 0 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 14385 14496 . - . ID=g8790.t1.exon6;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 14385 14496 . - 2 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . exon 13398 14120 . - . ID=g8790.t1.exon7;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . CDS 13523 14120 . - 1 ID=cds.g8790.t1;Parent=g8790.t1 NODE_726_length_18545_cov_39.4195 . three_prime_UTR 13398 13522 . - . ID=g8790.t1.utr3p1;Parent=g8790.t1 #PROT g8790.t1 g8790 MPSFLSVPWLLPDPPQCPCLLRGKYRFPEGSASLCLIALLLSLAYVLYWQRRRHRRRDARTRHSGHGEHPPPKVRGGWPYFGHVFDIAGDLVGFLAKNRRQLGDVFVAKVTGDEYTFLLGNEATRFFGAAPRDLLLPVIPAGKTAEHLGVPDYFVREALDSVHVFHDSVMSLLGGDLSGRGGNIVQEAADIIDESLDKLSAKGSFNVFEILEDALFRACTAAFVSRDLCTQHYDQWLNLYQEADVTYGVASGRANPMDPRLWWRRGELFESLEVLFERVVESRKESGRSEKDLVGILMTQASHDGIVDTTKVAQYVLSRAYLVMASVFLDVYLAASWTVMHIAGDKILAKRVLAEVEAASRDTTGSFSLVALRSQMPLLRACIGESRRMHSANVHARRLAADAHHVTASGKRLVLKKDTVVAAIAHPSLSVDTTPQSGNSHGNQRTRARRQREHFDPDSVLDAIGHPHMHDGLFVCGGDPVLACPGKAASVDVAVLAVAMLVQRFDFVLAGVMPAARLNGFSLATTRPADGDCFVTYSSRGEDDASA* # ORIGINAL: g8786.t1 original gene structure, not modified by PASA NODE_726_length_18545_cov_39.4195 AUGUSTUS gene 77 1611 . - . ID=g8786;Name=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS mRNA 77 1611 . - . ID=g8786.t1;Parent=g8786;Name=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS exon 1033 1611 . - . ID=g8786.t1.exon1;Parent=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS CDS 1033 1611 . - 0 ID=cds.g8786.t1;Parent=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS exon 674 844 . - . ID=g8786.t1.exon2;Parent=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS CDS 674 844 . - 0 ID=cds.g8786.t1;Parent=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS exon 77 265 . - . ID=g8786.t1.exon3;Parent=g8786.t1 NODE_726_length_18545_cov_39.4195 AUGUSTUS CDS 77 265 . - 0 ID=cds.g8786.t1;Parent=g8786.t1 #PROT g8786.t1 g8786 MADANKHPPAERPPVAQRPAVAPRPGMSTSLSSPALSTPSSGLIAPASPNGTRAAAAAAAGPPQPKPYAGPSPARAAGGAPPPVAPRTTIVVPAHPQPHAPTSQGGPLSPRSADADAKRVTMAPQLAAQLNAALQSRPISVMPPRADAGAGASPDMPRASRIDVPAASSSARRPSSPALATSTSASSMSSVVGAFAAVRSLTVKGRKGPDSPSSIRATISVTTPQSRPALQGLFPAAQQQSDVDGFHFVEPPIADTAPPPTQGPPPGASAAILNGLDTFPDFTFTTTDSRSKIVWEMFTTERSYVKSLGIMIE # PASA_UPDATE: g8788.t1, single gene model update, valid-1, status:[pasa:asmbl_9073,status:12], valid-1 NODE_726_length_18545_cov_39.4195 . gene 2517 10997 . - . ID=g8788;Name=g8788.t1 NODE_726_length_18545_cov_39.4195 . mRNA 2517 10997 . - . ID=g8788.t1;Parent=g8788;Name=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 10988 10997 . - . ID=g8788.t1.exon1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 10988 10997 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 10803 10864 . - . ID=g8788.t1.exon2;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 10803 10864 . - 2 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 10476 10690 . - . ID=g8788.t1.exon3;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 10476 10690 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 10259 10332 . - . ID=g8788.t1.exon4;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 10259 10332 . - 1 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 9976 10037 . - . ID=g8788.t1.exon5;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 9976 10037 . - 2 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 9154 9515 . - . ID=g8788.t1.exon6;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 9154 9515 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 8821 8914 . - . ID=g8788.t1.exon7;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 8821 8914 . - 1 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 8498 8536 . - . ID=g8788.t1.exon8;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 8498 8536 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 8220 8306 . - . ID=g8788.t1.exon9;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 8220 8306 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 6528 7921 . - . ID=g8788.t1.exon10;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 6528 7921 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 5087 6242 . - . ID=g8788.t1.exon11;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 5087 6242 . - 1 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 4343 4855 . - . ID=g8788.t1.exon12;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 4343 4855 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 4064 4210 . - . ID=g8788.t1.exon13;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 4064 4210 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . exon 2517 3888 . - . ID=g8788.t1.exon14;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . CDS 2884 3888 . - 0 ID=cds.g8788.t1;Parent=g8788.t1 NODE_726_length_18545_cov_39.4195 . three_prime_UTR 2517 2883 . - . ID=g8788.t1.utr3p1;Parent=g8788.t1 #PROT g8788.t1 g8788 MPKNKESYIDDEASVGSDEESDEERELRAKKRAKKGSESESDDDDDDDEESSGEEDDEEEDGDDDGEDDGDDDNAIEAGEETEGPKDSAEGVTSKRSKKEKKDKSDENPLEKKEKRKRKIEELDAEVQNELQDLVGEEKGQGRRKRLRRHVDGEEASSGSESEDNDAGSDLHSDSENSDQDSLPDLGRAQAMAKREKRPVAAAAAATAPKSGAGALSGAGDKKGKKGKKGKGSDDEVDDLDDARMRREDERDLLEDRDLEDVDPMNEARDLFYNPELEAMLQEEEGLAASQDMVDDVERKKPTLKDIYEPAILEQKMITDVDELIRSTDIPERIQLRFPDRKPPSAERNELEVEARWIFEQAFRRDATSAFSVDTADAPSESLRDSIKAALEFMREGNYEVPFIANYRKEYIPGLDLDLLWRISDWDGRWSALVDRKVNIAGMIQAVRDERSTAAPSAGDEEGAGGRRAFFDDVSADDWDAQLDVLSERLDDAMTPEEALDVHADLHLRFGEAIRKVKSAEGSRQLRGQLARRDQFNACVRAGLGKLADYFGMTPARYAENVFHAVKLNTPVECERDPADVAADFVRRELPSIDSVLVATRQMVASRLAHQPQLRRAVRQSFYARAAVTVTPTPKGEREIDEWHMYGAFKYLDAKPLYAFRSTDQFLRLIRGERDGLLKVTIDMPGESEGDGPYCRELQRLMCGAGESEIERQWDAQRSQAVRLALTSLLFPLLRNEVRERLLDEARETVARLAAAALRTMVNVQPYPKAPEKRRKEKSGGSRDSKRKKSDRRRRNRRGSNSDDSDSDHDKNLFGGSDDDDGHDDVRQHNDEVDRFNEERDLGPYARVLSLTIGSGDDASFGVLLAADGEVADHIKLPSFRGGGGRIGPDGVPLPPDNDNARRRAESFELFRTFVADKKPYAIAIGIDGMDAYRMYEDLRRVFPDGDSDLGHPRIEVVPIAPARVFRDSARAAELYPEYPPLLRQAISLGRMLQDPLSEICGLNYGHAADVTCVSFNPLQSEVPPDVLKEHLFRVLIETVAIAGVDVNRAGAYAYYAPMLQFVCGLGPRKADAVMKAVKRMNGTVTNRDDLEGPLGPKVFENAAGFLIVRPAEYAHIESGRSYVDVLDTTRIHPESYTHARKIAMDALDVEEDKVNESRPSQPVEDLAGRTEVLDELDLDAYAEQVRGEVDAGAMSGPSRRRQTLYDIRDELKRPYAERRAPRSRPSIEQLFVMATGENEETLCRGMLVEAKVLRTMRGGVTCRLNGGLAGFIPISMLSDSRVESAEERVREGQAVQCRVVDIKFEKMSVDLSTRGSDLRDENGTYAARRDRYYGDKTEADARLRKKNRQDQQRGKAYVKRVIVHPKFKNVTRQQAEKLLATAEQGDVIIRPSSIGTDHLTVTWKVDENLFQHIDVVEEEKQSQLALGQRLCIGHERFEDLDEIIARHVHPMAELIRDIVSTRYYLAKSKQEIDERLRHDKQEQPRRIPYFVSFTREFPGKLILSYMPTSRPLHEYVTVTPEGYRFRNTLFRSPTDLIAYLKTHYKDPESLAHAQGRSHARVASGRTPAQAPSGYSSSRSAAPSSHSGGGYPGGSYPGQPRGWSAAPPPHNVPAPIPPPHHGGPQTLASISRSAPSMHHRHPPAPYNDARMPPPPQQQQQGWGGYGAPAPPPPPPHTHAPQGYPGPPSHIAQQGGQGGQGGQYGGWAPPPQPPSSMQAPPAAARRSRWDSDRMDVDPPA* # PASA_UPDATE: g1258.t1, single gene model update, valid-1, status:[pasa:asmbl_9941,status:3], valid-1 NODE_907_length_15989_cov_37.7505 . gene 5628 8148 . - . ID=g1258;Name=g1258.t1 NODE_907_length_15989_cov_37.7505 . mRNA 5628 8148 . - . ID=g1258.t1;Parent=g1258;Name=g1258.t1 NODE_907_length_15989_cov_37.7505 . five_prime_UTR 8057 8148 . - . ID=g1258.t1.utr5p1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . exon 7864 8148 . - . ID=g1258.t1.exon1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . CDS 7864 8056 . - 0 ID=cds.g1258.t1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . exon 7343 7491 . - . ID=g1258.t1.exon2;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . CDS 7343 7491 . - 2 ID=cds.g1258.t1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . exon 7033 7165 . - . ID=g1258.t1.exon3;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . CDS 7033 7165 . - 0 ID=cds.g1258.t1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . exon 6465 6671 . - . ID=g1258.t1.exon4;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . CDS 6465 6671 . - 2 ID=cds.g1258.t1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . exon 5628 6253 . - . ID=g1258.t1.exon5;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . CDS 6231 6253 . - 2 ID=cds.g1258.t1;Parent=g1258.t1 NODE_907_length_15989_cov_37.7505 . three_prime_UTR 5628 6230 . - . ID=g1258.t1.utr3p1;Parent=g1258.t1 #PROT g1258.t1 g1258 MGGGAFEGGRGGRGGGGFRGGRGGSFGGGGRGGSFGGGGRGGFGGGRGGFNRSQEFQGPPDSVLEIGVFQHPCEGEMVCKSTNEKIPYFNAPIYLENKTQIGKIEEIFGPLTDVHFTVKLQTGMVATSFTANQKVFIAPDKLLPLDRFLPKPPVPKVKGGRGVEKRGGGSSRGSPRGGGGFRGAPRGGGGFRGAPRGGGGFRGAPRGGGGFRGGAGGAPRGGGGFRGGRGRGGF* # PASA_UPDATE: g1256.t1, single gene model update, valid-1, status:[pasa:asmbl_9940,status:12], valid-1 NODE_907_length_15989_cov_37.7505 . gene 276 1005 . - . ID=g1256;Name=g1256.t1 NODE_907_length_15989_cov_37.7505 . mRNA 276 1005 . - . ID=g1256.t1;Parent=g1256;Name=g1256.t1 NODE_907_length_15989_cov_37.7505 . five_prime_UTR 819 1005 . - . ID=g1256.t1.utr5p1;Parent=g1256.t1 NODE_907_length_15989_cov_37.7505 . exon 673 1005 . - . ID=g1256.t1.exon1;Parent=g1256.t1 NODE_907_length_15989_cov_37.7505 . CDS 673 818 . - 0 ID=cds.g1256.t1;Parent=g1256.t1 NODE_907_length_15989_cov_37.7505 . exon 276 414 . - . ID=g1256.t1.exon2;Parent=g1256.t1 NODE_907_length_15989_cov_37.7505 . CDS 276 414 . - 1 ID=cds.g1256.t1;Parent=g1256.t1;3_prime_partial=true #PROT g1256.t1 g1256 MSIIYSLVSRGSTVLAEYTEKTGNFTTITQSIIEKIPPQDTKMTYVYDRYLFHYVSDSGYVYLCMAEEEFGRRVPFAYLQEIKDRFEGAFKGRAA # PASA_UPDATE: novel_model_26_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_9943,status:3], valid-1 NODE_907_length_15989_cov_37.7505 . gene 4621 5274 . + . ID=novel_gene_26_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_907_length_15989_cov_37.7505 . mRNA 4621 5274 . + . ID=novel_model_26_5b6be656;Parent=novel_gene_26_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_907_length_15989_cov_37.7505 . five_prime_UTR 4621 4822 . + . ID=novel_model_26_5b6be656.utr5p1;Parent=novel_model_26_5b6be656 NODE_907_length_15989_cov_37.7505 . exon 4621 5274 . + . ID=novel_model_26_5b6be656.exon1;Parent=novel_model_26_5b6be656 NODE_907_length_15989_cov_37.7505 . CDS 4823 5182 . + 0 ID=cds.novel_model_26_5b6be656;Parent=novel_model_26_5b6be656 NODE_907_length_15989_cov_37.7505 . three_prime_UTR 5183 5274 . + . ID=novel_model_26_5b6be656.utr3p1;Parent=novel_model_26_5b6be656 #PROT novel_model_26_5b6be656 novel_gene_26_5b6be656 MWDEPCPCNVTCRHDFFTFSTVALRRHTHAAHNTFMPSCVKVAPHAPAHSIASVFLRCLSVCLCTDAVHQQAHHLPLSPSHTLGYFLGAIIFYLFFYSTAAQQLCVGSGRVFGVCVHCL* # ORIGINAL: g1257.t1 original gene structure, not modified by PASA NODE_907_length_15989_cov_37.7505 AUGUSTUS gene 1835 4461 . + . ID=g1257;Name=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS mRNA 1835 4461 . + . ID=g1257.t1;Parent=g1257;Name=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 1835 1960 . + . ID=g1257.t1.exon1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 1835 1960 . + 0 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 2213 2318 . + . ID=g1257.t1.exon2;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 2213 2318 . + 0 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 2659 3074 . + . ID=g1257.t1.exon3;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 2659 3074 . + 2 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 3300 3369 . + . ID=g1257.t1.exon4;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 3300 3369 . + 0 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 3616 3754 . + . ID=g1257.t1.exon5;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 3616 3754 . + 2 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 3943 4025 . + . ID=g1257.t1.exon6;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 3943 4025 . + 1 ID=cds.g1257.t1;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS exon 4157 4461 . + . ID=g1257.t1.exon7;Parent=g1257.t1 NODE_907_length_15989_cov_37.7505 AUGUSTUS CDS 4157 4461 . + 2 ID=cds.g1257.t1;Parent=g1257.t1 #PROT g1257.t1 g1257 MAAPVRSHFFGPRTQLEELVRPSPRKAVSGIQNDVTLAELQIDEASRAALASLVDLFAYGDKPGIPFEMYPGPSLPTVSKVSVAPKPPVQRKPKAAKKPTVPIPQVPIVAAGTVGAAAAKKRKPRAKATVGAEVTAVRKAAMASAIPPTLTKPKGRAKAQPQPPLLPHLMPKTAKAPKPKRPRKPRPPAPPRVRTEEDFIGKQLPDLIRPGLNLLFVGINPGKTSATAGHHYAGVNNHFWRCLSACGLLHPGRTLTFADDVSLLDESIGFTNICARPSRGENDLNKLEILEGAVTLRRKLEMYRPRLACFVGKGIYEAYLGTKCDSLGLQPQRPDDPPGVRFFVMVSTSGRVVSHNFAEKLELFRRLAAAFDEVVGNDGDDGDEDDMDVDDDDDESDDDDDDDDDDDDDDDRNA* # PASA_UPDATE: g1259.t1, single gene model update, valid-1, status:[pasa:asmbl_9942,status:12], valid-1 NODE_907_length_15989_cov_37.7505 . gene 11961 15861 . + . ID=g1259;Name=g1259.t1 NODE_907_length_15989_cov_37.7505 . mRNA 11961 15861 . + . ID=g1259.t1;Parent=g1259;Name=g1259.t1 NODE_907_length_15989_cov_37.7505 . five_prime_UTR 11961 12009 . + . ID=g1259.t1.utr5p1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 11961 12054 . + . ID=g1259.t1.exon1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 12010 12054 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 12293 12328 . + . ID=g1259.t1.exon2;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 12293 12328 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 12494 12611 . + . ID=g1259.t1.exon3;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 12494 12611 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 12952 13047 . + . ID=g1259.t1.exon4;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 12952 13047 . + 2 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 13387 13487 . + . ID=g1259.t1.exon5;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 13387 13487 . + 2 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 13766 13915 . + . ID=g1259.t1.exon6;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 13766 13915 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 14502 14603 . + . ID=g1259.t1.exon7;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 14502 14603 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 14916 14972 . + . ID=g1259.t1.exon8;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 14916 14972 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 15340 15421 . + . ID=g1259.t1.exon9;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 15340 15421 . + 0 ID=cds.g1259.t1;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . exon 15747 15861 . + . ID=g1259.t1.exon10;Parent=g1259.t1 NODE_907_length_15989_cov_37.7505 . CDS 15747 15861 . + 2 ID=cds.g1259.t1;Parent=g1259.t1;3_prime_partial=true #PROT g1259.t1 g1259 MLLSKCAAVRASLVTGARSFSSARSKNDVVIVSAARTPIGSFRGVFANLTATQLGAVAVQAAVERAGIKASDVQEVVMGNVVSAGLGQAPARQAAIKAGIPETAVCFTVNKVCSSGMKAIMLAAQTIKLGEQEIIVAGGMESMSNVPYYLPKGRAGFGYGNQTVEDGILKDGLMDVYNNIHMGNCAEMTAKQFAITRQQQDEYAISSYKKSAAAVQTGAFKGEIAPVSVDKGKDKVLISEDEEYKKVNFDKVSSLKPVFDKSGTITAANASSLNDGGAALVLMSLGKAEALGLKPLARII # PASA_UPDATE: g256.t1, single gene model update, valid-1, status:[pasa:asmbl_1999,status:12],[pasa:asmbl_2003,status:12], valid-1 NODE_1569_length_10441_cov_42.4062 . gene 4897 10222 . - . ID=g256;Name=g256.t1 NODE_1569_length_10441_cov_42.4062 . mRNA 4897 10222 . - . ID=g256.t1;Parent=g256;Name=g256.t1 NODE_1569_length_10441_cov_42.4062 . five_prime_UTR 10218 10222 . - . ID=g256.t1.utr5p1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 10104 10222 . - . ID=g256.t1.exon1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 10104 10217 . - 0 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 9774 9887 . - . ID=g256.t1.exon2;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 9774 9887 . - 0 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 9492 9572 . - . ID=g256.t1.exon3;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 9492 9572 . - 0 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 8513 9006 . - . ID=g256.t1.exon4;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 8513 9006 . - 0 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 7227 8160 . - . ID=g256.t1.exon5;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 7227 8160 . - 1 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . exon 4897 6906 . - . ID=g256.t1.exon6;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . CDS 5209 6906 . - 0 ID=cds.g256.t1;Parent=g256.t1 NODE_1569_length_10441_cov_42.4062 . three_prime_UTR 4897 5208 . - . ID=g256.t1.utr3p1;Parent=g256.t1 #PROT g256.t1 g256 MVTVPAEEGLVLNNATSQYGFVFGHIFDQTATQEEVFDLAARKIVLKCLDGFNGTLFAYGQTGSGKTHTMEGGSATFEERGIIPRSVALLFSEIANRTEEEISVELSYLEIYNDIGYDLLNPASGISVHSIVQLPRVMMSEDVQNGRFVPKNLTSHSVESEEDALALLFEGGSNRKIAETPMNLASSRSHCVFTLTLTIRRNGSEVITRSKLHLVDLAGSERVYKSQADGLLLTEAKHINLSLHHLEHVIVTLQEQQRTGQRGHVPYRNSFLTMLLRDSLGGNCATAMIATLSTEPENAHETVSTCRFAQRVALISNTLAKNEVLDDKMMIRKLQDQVAQLKALLGLREAPSFGADLDDVQRGNIFKLMRAYIDDAIPDPLPAMSDAETLRECCRSLKRISHSMRMSDERRRLGITGGNTPEGNRVAETRELFELRRRVKKMKTMLGDKGVDYASDDDDDGPIDQPRRGHANHGGGGGGGGGGGNKRTHGQHSGDMNATFTMDYERTKKGKDVGRMPSESFNGGGGGFNDGGGELERSVGRKNEKKHKQSKSMDMKKPKVKRMHYPGDDDRVEKLQRLQAVVVERESMRREFDERQREYQREELRLMAQELRLRLMTVGQQVSFQQRRIGELLSQNVSAEVLERERIAERHLIAKEQQTRQRYSEIVEQERALGAAAAAQAPRPVPSVWQSPPQTQSLSLSMSQSQHAHVQQQQQPQQQPQQQQPQQQPTRTVSNVSSYTQPPSQQTPQTVRSTAPNVATSIASSTPSTSIHLNNSLSMSGGQSLSRSIPASSSTGRPQGTDRARMESVLDDSHMDSMTRQLAIKEEATRQRLLLLKQQMKMGGDGGGGVGATPSSLSFSASQQSGALGSSQPQQTLMRQTVDAGNRTAAQQESMQRPPPPDTKSTVVASGVQGSFRQSYFATAGGTMNGAPTGAGTTHKPTLVARTDPKQINAHPTTSDGSQHHTAGHAQHSKAGKDSKLDSHANNGKGKGPPIVSSFGAGHGLATAHSSLSSKEEQQHSTKRNHHNTQGHSNAASSKREPASPEEEVASDEDEYGVRKSRRRAEGIGSNNNRTADVVSVTSGGSGTFSTSFVEMKKEKDRVARIRRTMQAAVVIQRWWRKASSRKNKYKSYRLEGGRIVGGR* # PASA_UPDATE: g255.t1, single gene model update, valid-1, status:[pasa:asmbl_2002,status:12], valid-1 NODE_1569_length_10441_cov_42.4062 . gene 2597 4364 . + . ID=g255;Name=g255.t1 NODE_1569_length_10441_cov_42.4062 . mRNA 2597 4364 . + . ID=g255.t1;Parent=g255;Name=g255.t1 NODE_1569_length_10441_cov_42.4062 . exon 2597 4364 . + . ID=g255.t1.exon1;Parent=g255.t1 NODE_1569_length_10441_cov_42.4062 . CDS 2597 4090 . + 0 ID=cds.g255.t1;Parent=g255.t1 NODE_1569_length_10441_cov_42.4062 . three_prime_UTR 4091 4364 . + . ID=g255.t1.utr3p1;Parent=g255.t1 #PROT g255.t1 g255 MMHATFRLWRGCATHVQAHTSAIPLVHVRPCHASASTDLHLLTVRAHNGRVHFHSDSSSPTPHASDVVTARQPSSDSDTTNTKTSSTAVPRKRSPFAAFSGTKLYEDAKRALKESPRTTIRRKSAVPRGTYHNFLSELRAYYVENNANPVVAAKDSRLFTMEDDRRIVELIKEGKGWADIAHKLGKPLRTMWARFQSTLDPRLRFGAFTEEEDAAIHAHVSEHGEGKWTELSTKMGHTRSGIALRTRYTCTLRPDIKTGPWSDDERRRLLEGIVKHGRDWTAVAGHVGTGRTPNDCRRTATYAFGGFDSASAVRGKRFAPDEDARLRIAVERHGRAHWNKVVKDVPGRSEDRLMERYKTIIPKWLHVPYTRDMRASVHVLLRGDGDVESKLAAQFKDLDAAKGWVTLELGMDDGSQVDWARVNGASGAERSAALDAVEKEILPRVTAEEWKEGATAVWVPAWRWERPICAGRRAPIAAVANHPRIEPFVAVNAGEDH* # PASA_UPDATE: g254.t1, single gene model update, valid-1, status:[pasa:asmbl_2000,status:12], valid-1 NODE_1569_length_10441_cov_42.4062 . gene 2 436 . + . ID=g254;Name=g254.t1 NODE_1569_length_10441_cov_42.4062 . mRNA 2 436 . + . ID=g254.t1;Parent=g254;Name=g254.t1 NODE_1569_length_10441_cov_42.4062 . five_prime_UTR 2 3 . + . ID=g254.t1.utr5p1;Parent=g254.t1 NODE_1569_length_10441_cov_42.4062 . exon 2 436 . + . ID=g254.t1.exon1;Parent=g254.t1 NODE_1569_length_10441_cov_42.4062 . CDS 4 309 . + 0 ID=cds.g254.t1;Parent=g254.t1;5_prime_partial=true NODE_1569_length_10441_cov_42.4062 . three_prime_UTR 310 436 . + . ID=g254.t1.utr3p1;Parent=g254.t1 #PROT g254.t1 g254 KDLDAAKGWVALELGMDDVSQVDWTRVNGASGAERSAALDAVEKEILPRVTAEEWKEGASGVWVPAWRWERPICAGRKAPIAVVANHPHIQEFVAVTGGDH* # ORIGINAL: g10960.t1 original gene structure, not modified by PASA NODE_3514_length_3288_cov_37.4279 AUGUSTUS gene 174 1643 . + . ID=g10960;Name=g10960.t1 NODE_3514_length_3288_cov_37.4279 AUGUSTUS mRNA 174 1643 . + . ID=g10960.t1;Parent=g10960;Name=g10960.t1 NODE_3514_length_3288_cov_37.4279 AUGUSTUS exon 174 1643 . + . ID=g10960.t1.exon1;Parent=g10960.t1 NODE_3514_length_3288_cov_37.4279 AUGUSTUS CDS 174 1643 . + 0 ID=cds.g10960.t1;Parent=g10960.t1 #PROT g10960.t1 g10960 MAYSYIPHPSNFVDGGPHAWTSSLDDTPLHYGGGPYDKYPPGRPYMRYPHEDDACFDGTLPPPPSYMYDGLGGPQDYDTSYGTYQTFTQGGLAHAYPQYGPVYHHSYRDVGHPLPVVFPSHEDTLQPYGSGGVDGGHVGHNRDYHHTQTGASSGPTATRAPAVSTAASKRSRMHAGKFDPDASRTPHTLIKERDGTGSHGVTDEKHTRESESGANESDDSASTWSSSGSPPPSSRGATAGGDNAPGDEQASGRASRRKFPDSASFASSTTHAQPSGLSQILCAASYANSRGGQKDTARAGVAEKEKANGVTGDAHGTDGSGEEGSGLQVFVDGRLLSVARREASQLTQCKFPGCMKMYSKLSYLRMHQRTHTGEKPYECPEEGCGRRFSRSDELTRHSRKHSGIKPFMCPSCKRRFSRSDHLNTHIRTHTGEKPFRCTQIGCGKLFARSDELTRHRAVHERNGSLSAGNNTHAIAATKGAPDALARDAK* # PASA_UPDATE: g10491.t1, single gene model update, valid-1, status:[pasa:asmbl_7430,status:12], valid-1 NODE_4541_length_1482_cov_25.3703 . gene 186 1378 . + . ID=g10491;Name=g10491.t1 NODE_4541_length_1482_cov_25.3703 . mRNA 186 1378 . + . ID=g10491.t1;Parent=g10491;Name=g10491.t1 NODE_4541_length_1482_cov_25.3703 . exon 186 272 . + . ID=g10491.t1.exon1;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . CDS 186 272 . + 0 ID=cds.g10491.t1;Parent=g10491.t1;5_prime_partial=true NODE_4541_length_1482_cov_25.3703 . exon 570 634 . + . ID=g10491.t1.exon2;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . CDS 570 634 . + 0 ID=cds.g10491.t1;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . exon 824 921 . + . ID=g10491.t1.exon3;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . CDS 824 921 . + 1 ID=cds.g10491.t1;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . exon 1287 1378 . + . ID=g10491.t1.exon4;Parent=g10491.t1 NODE_4541_length_1482_cov_25.3703 . CDS 1287 1378 . + 2 ID=cds.g10491.t1;Parent=g10491.t1 #PROT g10491.t1 g10491 DANGNPKYTALHVSVWDWDRFSQDDFMGQVIVLINDIINKSEAMVTKDVNWHVLTPRTIIDPLEPSLVSSKPHDLHTHTYYSPAWCQMCGALLKGVIRQGMQCKQCGFNCHEK* # ORIGINAL: g2849.t1 original gene structure, not modified by PASA NODE_5978_length_666_cov_68.3147_potentialcontaminant AUGUSTUS gene 30 652 . - . ID=g2849;Name=g2849.t1 NODE_5978_length_666_cov_68.3147_potentialcontaminant AUGUSTUS mRNA 30 652 . - . ID=g2849.t1;Parent=g2849;Name=g2849.t1 NODE_5978_length_666_cov_68.3147_potentialcontaminant AUGUSTUS exon 30 652 . - . ID=g2849.t1.exon1;Parent=g2849.t1 NODE_5978_length_666_cov_68.3147_potentialcontaminant AUGUSTUS CDS 30 652 . - 0 ID=cds.g2849.t1;Parent=g2849.t1 #PROT g2849.t1 g2849 MGKATNATVMDILDRLETGAFVSVLLTSSPKQHSVIVKLEAGKLSTVFPPSHSRVNADKLSIAHAVAQVFRGRIIRVAFQFCPRDYSLGFIAKLIQAGQLDGQLATFFDNKQPIRKRIALLPELIDESDSGKSALDNQIRDCTVYCIDNICLEDYARQFVGQEHIAAFASRIKLRNLVSPKMQRTIITPLAFNSARTAAPPRHEDIV # ORIGINAL: g13443.t1 original gene structure, not modified by PASA NODE_1352_length_11845_cov_51.827 AUGUSTUS gene 9386 11016 . - . ID=g13443;Name=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS mRNA 9386 11016 . - . ID=g13443.t1;Parent=g13443;Name=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS exon 10875 11016 . - . ID=g13443.t1.exon1;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS CDS 10875 11016 . - 0 ID=cds.g13443.t1;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS exon 10554 10679 . - . ID=g13443.t1.exon2;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS CDS 10554 10679 . - 2 ID=cds.g13443.t1;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS exon 10057 10177 . - . ID=g13443.t1.exon3;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS CDS 10057 10177 . - 2 ID=cds.g13443.t1;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS exon 9386 9461 . - . ID=g13443.t1.exon4;Parent=g13443.t1 NODE_1352_length_11845_cov_51.827 AUGUSTUS CDS 9386 9461 . - 1 ID=cds.g13443.t1;Parent=g13443.t1 #PROT g13443.t1 g13443 MASQLTLDDVERVVETNLTGAIMCVLAVLPSMQERNSGTIVGISSLAGYRGLPGCSVYGATKTALSYFLESLRIEVHWSTNIRVVDVCPGFVDTEMLRNTSDEFDIPSFAIVPCDKACRGIITAIARQQRYLPAFAYEWIVSRAPKSNDPAKNN* # PASA_UPDATE: g13442.t1, single gene model update, valid-1, status:[pasa:asmbl_1297,status:12], valid-1 NODE_1352_length_11845_cov_51.827 . gene 6697 8885 . + . ID=g13442;Name=g13442.t1 NODE_1352_length_11845_cov_51.827 . mRNA 6697 8885 . + . ID=g13442.t1;Parent=g13442;Name=g13442.t1 NODE_1352_length_11845_cov_51.827 . exon 6697 6744 . + . ID=g13442.t1.exon1;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . CDS 6697 6744 . + 0 ID=cds.g13442.t1;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . exon 7321 7800 . + . ID=g13442.t1.exon2;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . CDS 7321 7800 . + 0 ID=cds.g13442.t1;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . exon 8374 8885 . + . ID=g13442.t1.exon3;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . CDS 8374 8760 . + 0 ID=cds.g13442.t1;Parent=g13442.t1 NODE_1352_length_11845_cov_51.827 . three_prime_UTR 8761 8885 . + . ID=g13442.t1.utr3p1;Parent=g13442.t1 #PROT g13442.t1 g13442 MAKSDAVRKDGGSKSKEGDAPREKRKSTGEDDGAGHGDDRVKGGEHKAKKEKKEKKEKKEKSEGEEKKEKKEKSEGEEKKEKKEKKEEGEKKEKKEKKEKKEKEEKKEKREEEEKKEKKEKKEKKEKKEKKEKSEKRGRESEAEDDDNTAKRSKKSHTHDATQSKPTQPQNGPGSEAHATGAGGVWVDWSASQFESEDRKNKFLRLMGAKKSAGPTTPATSAQAAVALASTFPATTHHTAVEKNIAEKINRDLESQFERARQVNYGGPQHGSGAAGHRGLGFDSDETQGAEKKKSWKHGSGRRF* # PASA_UPDATE: g13441.t1, single gene model update, valid-1, status:[pasa:asmbl_1299,status:12], valid-1 NODE_1352_length_11845_cov_51.827 . gene 334 5949 . - . ID=g13441;Name=g13441.t1 NODE_1352_length_11845_cov_51.827 . mRNA 334 5949 . - . ID=g13441.t1;Parent=g13441;Name=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 5766 5949 . - . ID=g13441.t1.exon1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 5766 5949 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 5276 5384 . - . ID=g13441.t1.exon2;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 5276 5384 . - 2 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 4736 5017 . - . ID=g13441.t1.exon3;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 4736 5017 . - 1 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 4399 4558 . - . ID=g13441.t1.exon4;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 4399 4558 . - 1 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 4018 4164 . - . ID=g13441.t1.exon5;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 4018 4164 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 3422 3543 . - . ID=g13441.t1.exon6;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 3422 3543 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 2853 2984 . - . ID=g13441.t1.exon7;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 2853 2984 . - 1 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 2519 2685 . - . ID=g13441.t1.exon8;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 2519 2685 . - 1 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 2115 2231 . - . ID=g13441.t1.exon9;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 2115 2231 . - 2 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 1830 1892 . - . ID=g13441.t1.exon10;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 1830 1892 . - 2 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 1514 1662 . - . ID=g13441.t1.exon11;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 1514 1662 . - 2 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 1070 1303 . - . ID=g13441.t1.exon12;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 1070 1303 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 832 915 . - . ID=g13441.t1.exon13;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 832 915 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . exon 334 578 . - . ID=g13441.t1.exon14;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . CDS 516 578 . - 0 ID=cds.g13441.t1;Parent=g13441.t1 NODE_1352_length_11845_cov_51.827 . three_prime_UTR 334 515 . - . ID=g13441.t1.utr3p1;Parent=g13441.t1 #PROT g13441.t1 g13441 MSATTNGAVTLKSFIVPNSRTSSSEGPVYRSTLVRDGELVSKFHQGVTTLYENFKRGVAVAGDRPCLGQRPLLPNGNRDSSFLWLSYNDVAKRVTHIGSGLVHLGVQPRDNIGIYLINRPEWTITEQACNAYSIVVCTLYDTYGPDAVGYITMDAQLSSIVTSLDKVSSLLAEVDKLKKTLRTLITVDGRPSPDVTRRFAAEGIAVLSLEEVEASGRSKPLAHVPPKPNDLATICYTSGTTGDPKGALLTHGNIVANIAGILYAGKYGVGLTIYPSDVHVSYLPLAHMFERLVQVMILGGGAAIGFYSGDPLILLDDVAILRPTIFASVPRIYNRLYSKILATVNETGGAKKALFDRALSTKLENLRSHNGLTHAIYDRLVFGKVRARLGGRVRLMVTGAAPIAGEVISFLRVAFSCEVLEGFGQTECSAAATLGVRGDYSVGHVGVPLPCAELKLVDVPDMNYTSRDAPCPRGEVCIRGPHVFVGYLNKDAQTREALDSDGWLHTGDIGRWNPDGTLTIIDRKKSIFKLAQGEYVAPEKIENVYVRSPYVAQAFIYGDSLQSHLVGIIVPDFEVLSPFCKAKGLGTNMREIVANPRVKAIILESIKEESKKAGLAGFEIVRDIFLSDDAFSVQNNILTPSFKLKRPQAKAQYDKHIRAMYAKPQVESKL* # PASA_UPDATE: g3626.t1, single gene model update, valid-1, status:[pasa:asmbl_8886,status:3], valid-1 NODE_691_length_19015_cov_38.1106 . gene 4006 8330 . + . ID=g3626;Name=g3626.t1 NODE_691_length_19015_cov_38.1106 . mRNA 4006 8330 . + . ID=g3626.t1;Parent=g3626;Name=g3626.t1 NODE_691_length_19015_cov_38.1106 . five_prime_UTR 4006 4134 . + . ID=g3626.t1.utr5p1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 4006 4219 . + . ID=g3626.t1.exon1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 4135 4219 . + 0 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 4656 4719 . + . ID=g3626.t1.exon2;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 4656 4719 . + 2 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 5230 5292 . + . ID=g3626.t1.exon3;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 5230 5292 . + 1 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 5553 6090 . + . ID=g3626.t1.exon4;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 5553 6090 . + 1 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 6436 6573 . + . ID=g3626.t1.exon5;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 6436 6573 . + 0 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 6942 7200 . + . ID=g3626.t1.exon6;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 6942 7200 . + 0 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 7525 7748 . + . ID=g3626.t1.exon7;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 7525 7748 . + 2 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . exon 8081 8330 . + . ID=g3626.t1.exon8;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . CDS 8081 8182 . + 0 ID=cds.g3626.t1;Parent=g3626.t1 NODE_691_length_19015_cov_38.1106 . three_prime_UTR 8183 8330 . + . ID=g3626.t1.utr3p1;Parent=g3626.t1 #PROT g3626.t1 g3626 MFSVVQACEGEHATKCGYCKSKTGSISYGLWAHRLTPSDYQSLIDRGWRRSGMYIYKPSMDKTCCPAFTIRGAATLFSMHRSHKRILKRMQKYMEGDLIGEIRRRRYSSTSSDNRVEISGAWAAKLRVDHPQPPSAPAPLNMDAVTTMPPAPREPKMAVPGADAPTLPTNGMKMPSSGPRSPAAAATELPKKAKQRRLERKIARLKAQGRDVEQALAESRANWRRSNKPLSLEKMIEWRPHQRKYAHKLEVTCVPAAVTDETFALYHKYQVAVHGDKPEKITREGFKRFLVDSPIVREQFPEGTPKVEGIDSYGTFHQLYRLDKKLVAVGVIDILPHCVSSVYLFYDPEYAMLSLGVYSSLREIYLARALSKHLPLLKYQYLGYYIHTCPKMQYKAQYGPAELLCPHSLEFVPFDSCASRVDLSKGVTLKPNGPSQLPVVNPGDTLLLVDGGVRSFKMMSNDEARPIVSLVCEYARRVGTALSAKMLLSP* # ORIGINAL: g3628.t1 original gene structure, not modified by PASA NODE_691_length_19015_cov_38.1106 AUGUSTUS gene 13601 15094 . + . ID=g3628;Name=g3628.t1 NODE_691_length_19015_cov_38.1106 AUGUSTUS mRNA 13601 15094 . + . ID=g3628.t1;Parent=g3628;Name=g3628.t1 NODE_691_length_19015_cov_38.1106 AUGUSTUS exon 13601 15094 . + . ID=g3628.t1.exon1;Parent=g3628.t1 NODE_691_length_19015_cov_38.1106 AUGUSTUS CDS 13601 15094 . + 0 ID=cds.g3628.t1;Parent=g3628.t1 #PROT g3628.t1 g3628 MRGNALWIANLSPPSKDMAVSGHFHPFASSVASIGFLHSTAAIRGIVLRSTPHVAGQSSLSSPSASKSSLVEAVAPEDDVEQRGTASLELQTRGSFTRFHSTALYANAKQIFLERVPISRIKNIRQMNATPAPPTNYLHGVREYLESMEFTEKASERFPPHYSEEDRRIFELVRSGLGWSEIELAIGKRSQVLMGRFMTSLDPRLHRGPFTAEEDAAIHAHVREHGKGKWAELSAKMGHTRSGTALQKRYTNTLRPDIKKGVWSDDERRRLLESIAKHGRDWTAVAGHVGTGRTAHDCRETASRAFGAYIEPLEKQGKRFTSDEDARLRNAVERHGRSNWDKVAEDVPGRGSDSLKLRYVRILPKWMRVPYSQGARALVRALLRGVDELEGKLAAHFMDIDAAEGWVALELGMDDGSQVDWARVNGASGVERSAALDAVEKEIMPRVTVEEWKEGASAVWVPAWRWERPICAGRRAPIAAVANHPHIKPFVATTEGQ* # PASA_UPDATE: g3625.t1, single gene model update, valid-1, status:[pasa:asmbl_8882,status:12], valid-1 NODE_691_length_19015_cov_38.1106 . gene 1551 3589 . - . ID=g3625;Name=g3625.t1 NODE_691_length_19015_cov_38.1106 . mRNA 1551 3589 . - . ID=g3625.t1;Parent=g3625;Name=g3625.t1 NODE_691_length_19015_cov_38.1106 . exon 3434 3589 . - . ID=g3625.t1.exon1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . CDS 3434 3589 . - 0 ID=cds.g3625.t1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . exon 2993 3167 . - . ID=g3625.t1.exon2;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . CDS 2993 3167 . - 0 ID=cds.g3625.t1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . exon 2564 2762 . - . ID=g3625.t1.exon3;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . CDS 2564 2762 . - 2 ID=cds.g3625.t1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . exon 2085 2277 . - . ID=g3625.t1.exon4;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . CDS 2085 2277 . - 1 ID=cds.g3625.t1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . exon 1551 1941 . - . ID=g3625.t1.exon5;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . CDS 1819 1941 . - 0 ID=cds.g3625.t1;Parent=g3625.t1 NODE_691_length_19015_cov_38.1106 . three_prime_UTR 1551 1818 . - . ID=g3625.t1.utr3p1;Parent=g3625.t1 #PROT g3625.t1 g3625 MAELISIKGLAKFAHPYFAVNLAIAATYPLLKWIPSLERALYGEDVPLEAINRESEILLFMAAAVVIKIRRSKTTEQYIGTLLFYAKIANLMLIYPQSKRFAFVYVLCCIEPKFAQKNRVQDLSGGDFITAIAETGALDNARRGSVPVHVTWVIHFHSAYSPPSVHVMPLLDRLAESYGSETVKFGRLDVARCPALAERYKVDCTPLSRQLPTLIVVRGGIECARIPAVVDGRVAHAIFSEDTIVGTFNLQRTDSAATPASPSPATDNASGARENKKGKRS* # PASA_UPDATE: g3624.t1, single gene model update, valid-1, status:[pasa:asmbl_8881,status:3], valid-1 NODE_691_length_19015_cov_38.1106 . gene 22 1137 . + . ID=g3624;Name=g3624.t1 NODE_691_length_19015_cov_38.1106 . mRNA 22 1137 . + . ID=g3624.t1;Parent=g3624;Name=g3624.t1 NODE_691_length_19015_cov_38.1106 . five_prime_UTR 22 61 . + . ID=g3624.t1.utr5p1;Parent=g3624.t1 NODE_691_length_19015_cov_38.1106 . exon 22 1137 . + . ID=g3624.t1.exon1;Parent=g3624.t1 NODE_691_length_19015_cov_38.1106 . CDS 62 538 . + 0 ID=cds.g3624.t1;Parent=g3624.t1 NODE_691_length_19015_cov_38.1106 . three_prime_UTR 539 1137 . + . ID=g3624.t1.utr3p1;Parent=g3624.t1 #PROT g3624.t1 g3624 MWWRVAGHPSIAIDCFRAALAHAPAGVGELAIVPLADAYRALGKHDECRNVISELATHVDGTAVPTAPDDPLLVSGRKAAEFGLPFEGKQRLSRDAHPLLYYMDAVCAASAESSQSHGLWNDARNRLKSCLFRMPHHRGALRRLQSLECQVAAKRSVT* # PASA_UPDATE: g3629.t1, single gene model update, valid-1, status:[pasa:asmbl_8884,status:12], valid-1 NODE_691_length_19015_cov_38.1106 . gene 15409 17016 . + . ID=g3629;Name=g3629.t1 NODE_691_length_19015_cov_38.1106 . mRNA 15409 17016 . + . ID=g3629.t1;Parent=g3629;Name=g3629.t1 NODE_691_length_19015_cov_38.1106 . exon 15409 15417 . + . ID=g3629.t1.exon1;Parent=g3629.t1 NODE_691_length_19015_cov_38.1106 . CDS 15409 15417 . + 0 ID=cds.g3629.t1;Parent=g3629.t1 NODE_691_length_19015_cov_38.1106 . exon 15701 16660 . + . ID=g3629.t1.exon2;Parent=g3629.t1 NODE_691_length_19015_cov_38.1106 . CDS 15701 16660 . + 0 ID=cds.g3629.t1;Parent=g3629.t1 NODE_691_length_19015_cov_38.1106 . exon 16777 17016 . + . ID=g3629.t1.exon3;Parent=g3629.t1 NODE_691_length_19015_cov_38.1106 . CDS 16777 17016 . + 0 ID=cds.g3629.t1;Parent=g3629.t1 #PROT g3629.t1 g3629 MGRGVRFFSRALHPTATEVALANKPCTAASGDALSSETKRRGSFALFKGTNLYADARKALEESTRTYVYRKSGVPRAKRRDYLTELRAYYLENSDIGISTRSSKYFKVEDDRRIVELIKEGKGWADIGRALDKNGRAIMERCQVSLDPRLRHEPYTSEEDAAILAHVSEHGEGKWVALSVTMGYTRSSNVLRNRYADTLRPDIKKGVWSDDERRRLLEGIVKHGRNWVAVAGHVGTGWNSNDCRRTATYAFGGFDYTSAVRWKRFTADEDARLRIAVERHGRADWDKVVEDIPRRTARSLPIRYGKIMPKWMRVSYSPAARASVDWARVNGASGAERSAALDAVEKEIMPRVTVEEWKEGASAVWVPAWRWERPICAGRSAPIAAVVNHSRIKPFVAATEGQ* # PASA_UPDATE: g3627.t1, single gene model update, valid-1, status:[pasa:asmbl_8887,status:3], valid-1 NODE_691_length_19015_cov_38.1106 . gene 8984 13204 . + . ID=g3627;Name=g3627.t1 NODE_691_length_19015_cov_38.1106 . mRNA 8984 13204 . + . ID=g3627.t1;Parent=g3627;Name=g3627.t1 NODE_691_length_19015_cov_38.1106 . five_prime_UTR 8984 9267 . + . ID=g3627.t1.utr5p1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 8984 9420 . + . ID=g3627.t1.exon1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 9268 9420 . + 0 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 9644 9772 . + . ID=g3627.t1.exon2;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 9644 9772 . + 0 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 9921 10130 . + . ID=g3627.t1.exon3;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 9921 10130 . + 0 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 10381 10542 . + . ID=g3627.t1.exon4;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 10381 10542 . + 0 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 10921 11360 . + . ID=g3627.t1.exon5;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 10921 11360 . + 0 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 11538 11669 . + . ID=g3627.t1.exon6;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 11538 11669 . + 1 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 11850 11965 . + . ID=g3627.t1.exon7;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 11850 11965 . + 1 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 12128 12304 . + . ID=g3627.t1.exon8;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 12128 12304 . + 2 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . exon 12423 13204 . + . ID=g3627.t1.exon9;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . CDS 12423 12805 . + 2 ID=cds.g3627.t1;Parent=g3627.t1 NODE_691_length_19015_cov_38.1106 . three_prime_UTR 12806 13204 . + . ID=g3627.t1.utr3p1;Parent=g3627.t1 #PROT g3627.t1 g3627 MARIVKACVLVVLLASFAAADVYMHNPRGSNNRLNEQSANRNNANRLFDSQNNNRGGYNAGDKTQDAAGGNAATPSNILTMIDDTATGNMQYNMVFYENSILPIEWTNQHGCGGRESDDPQQLNCAIILQYTCDSTATVDDYLRVSLRDGTDTGTPNEPNSLDEAQTKTRAGPTDNTGRHESEVYYFECKNRRRNQGLFTADQKLNGNSARFTRQNPGGTRRGLECPEERDYYPYWHPTMWRDIALLTDKVELPYCQNGAVIGSNNNVARNRCDLPSAGSTDARVKAITANNQAECTTAGGQWTSYSHGLAAPECRLGDWSRPNHLGNGRNGQPNTYNWTIPRVTTDSKFQLYNGNMARCVVRLRYNISTDDYHPSTNSSYNKNEATGQKSIIEENPVVDVGADFQGLRLAINTAQYGRTFQDRSHVFIVRQRPAGLAGSLFNINVRGKRGNIVQTYPSVEYDFQPNQIHVKVGDFIHWQWTGSNTHNNGDPAGDGQAGDAGEGRGGTDRSNVVASLSSNDNYPIPFTTDPTSPYYSLSLFNMFTCYLPRIDNTGMDQITPQECAVFMATSSRTKDIAQAKNTDALLNNAPASLVRGIIMKATAQASGRKFYYLCSRNNNFSNRSQKGVIIVA* # PASA_UPDATE: g5241.t1, single gene model update, valid-1, status:[pasa:asmbl_7349,status:3], valid-1 NODE_447_length_23536_cov_48.6123 . gene 2484 10621 . - . ID=g5241;Name=g5241.t1 NODE_447_length_23536_cov_48.6123 . mRNA 2484 10621 . - . ID=g5241.t1;Parent=g5241;Name=g5241.t1 NODE_447_length_23536_cov_48.6123 . five_prime_UTR 10428 10621 . - . ID=g5241.t1.utr5p1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 10245 10621 . - . ID=g5241.t1.exon1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 10245 10427 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 9908 10129 . - . ID=g5241.t1.exon2;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 9908 10129 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 9565 9729 . - . ID=g5241.t1.exon3;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 9565 9729 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 9327 9432 . - . ID=g5241.t1.exon4;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 9327 9432 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 8944 9176 . - . ID=g5241.t1.exon5;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 8944 9176 . - 2 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 8543 8797 . - . ID=g5241.t1.exon6;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 8543 8797 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 8187 8341 . - . ID=g5241.t1.exon7;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 8187 8341 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 7870 8020 . - . ID=g5241.t1.exon8;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 7870 8020 . - 1 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 7614 7727 . - . ID=g5241.t1.exon9;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 7614 7727 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 6817 7506 . - . ID=g5241.t1.exon10;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 6817 7506 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 4898 6676 . - . ID=g5241.t1.exon11;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 4898 6676 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 4377 4637 . - . ID=g5241.t1.exon12;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 4377 4637 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 3996 4226 . - . ID=g5241.t1.exon13;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 3996 4226 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 3579 3794 . - . ID=g5241.t1.exon14;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 3579 3794 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 3295 3453 . - . ID=g5241.t1.exon15;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 3295 3453 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 2966 3134 . - . ID=g5241.t1.exon16;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 2966 3134 . - 0 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . exon 2484 2817 . - . ID=g5241.t1.exon17;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . CDS 2675 2817 . - 2 ID=cds.g5241.t1;Parent=g5241.t1 NODE_447_length_23536_cov_48.6123 . three_prime_UTR 2484 2674 . - . ID=g5241.t1.utr3p1;Parent=g5241.t1 #PROT g5241.t1 g5241 MQLRHISTLIAAQDGPAKITALAWSRNHAKLAVVGVDRVVVLFDEMGEKRDKFSTKPADSQGPKNYQVKGMAFSPDSTKLAIAQSDNIVFVYKLGAEWGEKKSICNKYPQQSPVTCLVWPHQHANTVVFGLADGKVRVGNLKTNKSQTLFSTESMVVSIAASPDGMGFVSGHANGEIYRFFFDESMMGAQQGRLATHPCPPYALAWGETVFAAGCDMRIVSYDNDGRIQQQFDYSRDETEREFTAAEVSPSGQSIVVGSFNRLRVFNYSLRKNSWEEGGVKTIENLYTVSSLSWKYDGSRLAVGTLCGAVELFDCCLRRARYKGKFEFTYVGPSQVIVKRLSSGTRIVLKSHYGYEISKVNVFQDQFLIAHTSDTLLMGDMATCKLSEVAWRGSGNEKFYFDNPHVCMIFNAGELSIIEYGINEILGSVLTEHMNPRLLSVRINERRRRNDDDNKKIAYLVDLQTIRVLDLVTGLSLADVAHDARIDWLEMNGSGRKLLFRDKRRQLHLFDIATEARTTLLNYCSYVQWVPDSDVVVAQNRGNLCIWYSIDSPERVSMFPIKGEVENIERADGRTEVIVNEGVNSVSYALDEGLIEFGTAIEDGNFERAVAFLETLEMTPETEAMWRTLAQLSLADRQLDVSERCYSALGDIARARYLRNVNRVAEKAAAEGHGDGRDNYLVRARLAVLDKKFKAAESIFLENSGVEEAMDMYQQLHRWDDSIAIAEAKGHPELETLRRNYMQWLLDTGQEEKAGQMKEREKDYAAAINLYMRAGLPARAAQVVAQHEGLLGKSDLLERIAGALLKAGLYERAGELFEKLRMNPRALECYRKGHAYRRAVDLSRAAFPTEVVKLEEEWGDYLVRQKQMDSAINHYIEAGSAVKAIEAAIQSRQWNKAVQIVEMQEPNTAQKYYREIAGHFESVADFDLAERYYVRCGQPMEAIRMHTRANRWEAAHKLALTCMKPQQVVDLCINQAQEMEAQGKYREAERLYITVEEPDLAINMYKKARQYDEMIRLVTAYHKNLLVETHLHLAKELETEGNYRLAEQHYCAGKDWKGAVNMYRANDMWDDAYRVAKKEGGANLAKQVAFLWAKSLGGDSAIKLLTKFGLLEQAIDYAADNGAFDFAFDLCRSAMKSRLPDIHLKHAMFLEDEGTFREAEEEFIRAGKPREAVLMYVHNQDWQSAQRVAESYDPSSVMDVLVGQGKAALEKKEFGRAETLLLRAQKLEVAIAFYKEHNLWTDALRVAKEYMPHKLPELHDDYDRHLSEAASGSAGRDALVAPARTWEANGEYSRAIDAYLKLNTEHTADMDFLEGAWEKAVELAMKFVPDRAVDAVSTVSGRLIQIKRFEAAAELYVGVEMFKDAIDAYIRGSCWDKARACASDYCPQFRDYVETAYVKHLKSAGHAEKLVDVDVIAGLDMFVQRGEWNKCIEKAQSQGAEVLGKYVALYAAHLIKEKNVETAISLFNKHGAPPNAQNFNIYKRLAAEVLSKCGFKGEGYGFGVLRELKAILHRLVDAMAQNGESGSQPSREFERLLFVAHLATLRAKCGEKDQLVSFWGKISVAMLRYTDEIPADKAFYEAGIAAKTCNWENLAFVFLNRYLDLSEAIEEGTLEMLENSDFVQTDIPFEVPLPEHQCLSEAKREEVREWVLAISMDQQVDQTLSRKPCDGCGAGMYEASLVCHNCKTRYEPCIVTGYPVLRSRVQCKSCNRAANKDDWNKFVMSERVCPWCNDTQSPSFAIK* # PASA_UPDATE: g5242.t1, single gene model update, valid-1, status:[pasa:asmbl_7350,status:3], valid-1 # ORIGINAL: g5242.t1.1.5b6be70c original gene structure, not modified by PASA NODE_447_length_23536_cov_48.6123 . gene 10895 12098 . - . ID=g5242;Name=g5242.t1 NODE_447_length_23536_cov_48.6123 . mRNA 10895 12098 . - . ID=g5242.t1;Parent=g5242;Name=g5242.t1 NODE_447_length_23536_cov_48.6123 . five_prime_UTR 11758 12098 . - . ID=g5242.t1.utr5p1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . exon 11534 12098 . - . ID=g5242.t1.exon1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . CDS 11534 11757 . - 0 ID=cds.g5242.t1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . exon 11212 11405 . - . ID=g5242.t1.exon2;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . CDS 11212 11405 . - 1 ID=cds.g5242.t1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . exon 10895 11095 . - . ID=g5242.t1.exon3;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . CDS 10986 11095 . - 2 ID=cds.g5242.t1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . three_prime_UTR 10895 10985 . - . ID=g5242.t1.utr3p1;Parent=g5242.t1 NODE_447_length_23536_cov_48.6123 . mRNA 10895 12098 . - . ID=g5242.t1.1.5b6be70c;Parent=g5242;Name=g5242.t1 NODE_447_length_23536_cov_48.6123 . five_prime_UTR 12038 12098 . - . ID=g5242.t1.1.5b6be70c.utr5p1;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . exon 11805 12098 . - . ID=g5242.t1.1.5b6be70c.exon1;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . CDS 11805 12037 . - 0 ID=cds.g5242.t1.1.5b6be70c;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . exon 11534 11716 . - . ID=g5242.t1.1.5b6be70c.exon2;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . CDS 11534 11716 . - 2 ID=cds.g5242.t1.1.5b6be70c;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . exon 11212 11405 . - . ID=g5242.t1.1.5b6be70c.exon3;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . CDS 11212 11405 . - 2 ID=cds.g5242.t1.1.5b6be70c;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . exon 10895 11095 . - . ID=g5242.t1.1.5b6be70c.exon4;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . CDS 10986 11095 . - 1 ID=cds.g5242.t1.1.5b6be70c;Parent=g5242.t1.1.5b6be70c NODE_447_length_23536_cov_48.6123 . three_prime_UTR 10895 10985 . - . ID=g5242.t1.1.5b6be70c.utr3p1;Parent=g5242.t1.1.5b6be70c #PROT g5242.t1 g5242 MVKHNPCLFSVLRSCGYVPALLNVGGGYEIRASDVRNNTRVLLDDVSLADKIWQRMKHEIPPTWEEHDVKGLNERLRFLRYDPGEKFEPHFDGAYVRENGERSFITVQLYLNEGYQGGSTSFLDSTEDGAQRFDYIPKTGSVLVFQHRLLHEGALLREGRKYTIRTDIMYAPSVL* #PROT g5242.t1.1.5b6be70c g5242 MGGQLTKEADGDRPLPHLTVSTAHTGNNSALLCDNIDANGVVRHEVPLPPKWNGKMAFVLDNVLSKQECDELIAYSESCGYVPALLNVGGGYEIRASDVRNNTRVLLDDVSLADKIWQRMKHEIPPTWEEHDVKGLNERLRFLRYDPGEKFEPHFDGAYVRENGERSFITVQLYLNEGYQGGSTSFLDSTEDGAQRFDYIPKTGSVLVFQHRLLHEGALLREGRKYTIRTDIMYAPSVL* # ORIGINAL: g5244.t1 original gene structure, not modified by PASA NODE_447_length_23536_cov_48.6123 AUGUSTUS gene 13918 19089 . + . ID=g5244;Name=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS mRNA 13918 19089 . + . ID=g5244.t1;Parent=g5244;Name=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 13918 15117 . + . ID=g5244.t1.exon1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 13918 15117 . + 0 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 15347 15401 . + . ID=g5244.t1.exon2;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 15347 15401 . + 0 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 15543 16380 . + . ID=g5244.t1.exon3;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 15543 16380 . + 2 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 16654 16774 . + . ID=g5244.t1.exon4;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 16654 16774 . + 1 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 16959 17104 . + . ID=g5244.t1.exon5;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 16959 17104 . + 0 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 17256 17308 . + . ID=g5244.t1.exon6;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 17256 17308 . + 1 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 17840 17914 . + . ID=g5244.t1.exon7;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 17840 17914 . + 2 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 18166 18659 . + . ID=g5244.t1.exon8;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 18166 18659 . + 2 ID=cds.g5244.t1;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 18832 19089 . + . ID=g5244.t1.exon9;Parent=g5244.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 18832 19089 . + 0 ID=cds.g5244.t1;Parent=g5244.t1 #PROT g5244.t1 g5244 MATLLRDRAVIYWTEFEVCEWVRALGAEYAEYEAAFLSRRIAGDQLLRLTNNDLQDFGIATVAHQLAILKAVAALRAGFEGGGSGRALELKPLAVAAHALHKEATEAVAAGKADAAQLPCLRIAALVKVAIVWADRYPITGEDAGQRLHLMAQGRQLVEAIRGAFDRGAPADASMALVAQAVSTMSHILCLNEQGEFDSEQHDGGDVQARAFRHVRLEKVAGEGFGCTIKKPHEASRGLLVNRILPGGVSERSGLLAPGDEIVEVSGRSIIGWTAQDFAALLPSLGNVIVLKVRIGNGVAERRSKDIAKDSSTGVPSPSPTPTPAPTSTPTPTAAPTPTPTPSSNTAPHASTTAPTAAHAPVQQQQQQQLQPSPNGKGAADAKRPSLTVGVDAGSAVSSQLSPRSAMKGASGAESTSPRKVSVSETVTKVEIAKDQEKAPAPSAPEENASHLSSSVRNIDGKVVRTCNADAGVVTPAAASTLAPAPATIPTPITTAATPAPTATQQPERKKERIIVTHSPAAAALGLAHKAPSTPPAQAVPVASSQPLQAAPQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQKQQLPAASPAAPTHSAPTPSAPTASPPTPAVAAPALDASWSAPAGTAPADAPPKEEKKLYSTGSCALPRHTSTRKKTPPGSPKVGKSLPASAMAHDVPVLCMELKDAVMKGWLFKLGGSGLTPKNWRKRWFVLKDSTLYYFKTSLDSRALGIITLPSFVVQPVKDKNRKWAFRASHAGTRTYYFSAETKQDMTRWMNAMSLAAIQFDPNETAEDAKARLAKYRPPQIVDYDSASDEESQPTGGSNVTFNHGDGRSAAAVASPAPAVASPAPVVASQAPVVASPAASSAASSDQSAGHVVKSISSAQFQPQSRPKSHGSKSDSSDSESEEDLNLSREDSKRQHKELERLQKEILWQQKETSKALTRQATLKESKEAKEVREGKEVQSPSMSRQQSVKDKRLEALRNGSTMSRSGSTDSLSLDEPVLPDPRKAELQRKIEDLKATLREKSAQLAKIETLLGGEITKDVLVQHDIESKKKEDFKFLMDW* # PASA_UPDATE: g5243.t1, single gene model update, valid-1, status:[pasa:asmbl_7352,status:3], valid-1 NODE_447_length_23536_cov_48.6123 . gene 12084 13462 . - . ID=g5243;Name=g5243.t1 NODE_447_length_23536_cov_48.6123 . mRNA 12084 13462 . - . ID=g5243.t1;Parent=g5243;Name=g5243.t1 NODE_447_length_23536_cov_48.6123 . five_prime_UTR 13432 13462 . - . ID=g5243.t1.utr5p1;Parent=g5243.t1 NODE_447_length_23536_cov_48.6123 . exon 12861 13462 . - . ID=g5243.t1.exon1;Parent=g5243.t1 NODE_447_length_23536_cov_48.6123 . CDS 12861 13431 . - 0 ID=cds.g5243.t1;Parent=g5243.t1 NODE_447_length_23536_cov_48.6123 . exon 12084 12780 . - . ID=g5243.t1.exon2;Parent=g5243.t1 NODE_447_length_23536_cov_48.6123 . CDS 12356 12780 . - 2 ID=cds.g5243.t1;Parent=g5243.t1 NODE_447_length_23536_cov_48.6123 . three_prime_UTR 12084 12355 . - . ID=g5243.t1.utr3p1;Parent=g5243.t1 #PROT g5243.t1 g5243 MAARARVLVLPVTRDRWALHWLPSHSVGAGGAHFDRSHFGVLGHERANESKSSSTHSTTSQAHAEHVDGRLQRLIEKAKTRAASEWDELSRASPSSLRGRAYTALSTLMSRMDPIESFLVNITPPPAAADLSAGCIHRPLIEFVYPARLNEKLVRRRLRLLANAASRDIDARFRAWCYAVPLTFSLGIIPGPNIFLAWNAFRCQSLWRARRGSQGLRDILAFNHASFVPSAGIVLKATAAAESIEGSPTSIDGRKSGSLGAPENGQQAGAAHGERGECDHIPSFVGTEEIEATAALLGISPGDLSLIVRQTKLRDPRHPRDLRERALQLLA* # ORIGINAL: g5245.t1 original gene structure, not modified by PASA NODE_447_length_23536_cov_48.6123 AUGUSTUS gene 19660 23190 . - . ID=g5245;Name=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS mRNA 19660 23190 . - . ID=g5245.t1;Parent=g5245;Name=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 23126 23190 . - . ID=g5245.t1.exon1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 23126 23190 . - 0 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 22875 22988 . - . ID=g5245.t1.exon2;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 22875 22988 . - 1 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 22703 22788 . - . ID=g5245.t1.exon3;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 22703 22788 . - 1 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 22453 22613 . - . ID=g5245.t1.exon4;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 22453 22613 . - 2 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 22000 22110 . - . ID=g5245.t1.exon5;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 22000 22110 . - 0 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 21627 21808 . - . ID=g5245.t1.exon6;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 21627 21808 . - 0 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 21188 21292 . - . ID=g5245.t1.exon7;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 21188 21292 . - 1 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 20916 21030 . - . ID=g5245.t1.exon8;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 20916 21030 . - 1 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 20111 20669 . - . ID=g5245.t1.exon9;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 20111 20669 . - 0 ID=cds.g5245.t1;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 19660 19880 . - . ID=g5245.t1.exon10;Parent=g5245.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 19660 19880 . - 2 ID=cds.g5245.t1;Parent=g5245.t1 #PROT g5245.t1 g5245 MAERTFVPLANGDVHTDGDSLRVFLATWNVNCASPDIDDVRKWLSLSKDAASKVDVFAIGLQEFDLTARAFVYADDTIRAKWIDAIEKVLGDNFVQLAEVRLAGMLLVVYATGHVAGEARDVGASYVGCGLRVMPYYQLGNKGGLAVRFDYKGKSVCILSCHLAAHSHYCQRRNRDFHRIVRRLRLGESPFYAGSHPVLSHDCVFVMGDLNYRICLPSEEARRLAMAGDLGALSACDQLRLQQQYGRSFVGFDEAPLTFPPTYKYDVGSAQFDSSDKARGPAWCDRILWKATGVSVWPIVYQSHPSILSSDHRPITGFYEVSLTGLHSTAAHSHSPLASSSPLPFSDKRPGDDGHGLLANGDAHAHDANGTGHPPARQHGWVEGVRRPLLAAIDSLLRALVVTSAVVALFLGTPRPGEPLPRCATRVTGVIGAGGASGSRSAGADGRPRHWVRGLLSTEGMGHGRLFPRNAADLRANRPLSLAFLALPLLFEGVVGIAYGISHWLRVCLALIVLAPPTRLSSLAYLVLWIGVTWPAVAAVAMVCVWDGLRARRHLAAAVFPAWHGRPADTRA* # ORIGINAL: g5240.t1 original gene structure, not modified by PASA NODE_447_length_23536_cov_48.6123 AUGUSTUS gene 174 2309 . + . ID=g5240;Name=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS mRNA 174 2309 . + . ID=g5240.t1;Parent=g5240;Name=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 174 518 . + . ID=g5240.t1.exon1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 174 518 . + 0 ID=cds.g5240.t1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 753 1068 . + . ID=g5240.t1.exon2;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 753 1068 . + 0 ID=cds.g5240.t1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 1237 1372 . + . ID=g5240.t1.exon3;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 1237 1372 . + 2 ID=cds.g5240.t1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 1646 1745 . + . ID=g5240.t1.exon4;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 1646 1745 . + 1 ID=cds.g5240.t1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 1881 1973 . + . ID=g5240.t1.exon5;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 1881 1973 . + 0 ID=cds.g5240.t1;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS exon 2097 2309 . + . ID=g5240.t1.exon6;Parent=g5240.t1 NODE_447_length_23536_cov_48.6123 AUGUSTUS CDS 2097 2309 . + 0 ID=cds.g5240.t1;Parent=g5240.t1 #PROT g5240.t1 g5240 VFLCRKSDTAELCAVKRMRKRKLCDQNEVHHIRNERNVLGSVDSEWLVRLLYSFQDADNVYLAMEYVPGGDMRTLLSDSGLLSEEHASFYFAESVACVAALHEFGFIHRDLKASHPENFLVDRTGHLKLTDFGLAKGHLSPDALSRLRDRLDGSLRRDLVKYSSVDRRSIHRTARAEDKSRAFSLVGSPDYMAPEMLGGKGYDLRVDYWSLGCILFEFLCGFPPFTAQTMEEVWIHVLRWQEVLQRPTRTQDDVEVSDAAWDLIARLVCGPEERLHTLGAVRGHAFVGSMPWDNSLRTMDPPFVPALADDSDTSYFDEFEDTAAADDLKEQFGRHEARAQRQSGSKDARLWVGWTFRRGGRPGKRPSVSNALGATAPDGDHDDDDCVSLGGCANQWPFTY* # ORIGINAL: g2928.t1 original gene structure, not modified by PASA NODE_21246_length_135_cov_103.517_potentialcontaminant AUGUSTUS gene 1 111 . - . ID=g2928;Name=g2928.t1 NODE_21246_length_135_cov_103.517_potentialcontaminant AUGUSTUS mRNA 1 111 . - . ID=g2928.t1;Parent=g2928;Name=g2928.t1 NODE_21246_length_135_cov_103.517_potentialcontaminant AUGUSTUS exon 1 111 . - . ID=g2928.t1.exon1;Parent=g2928.t1 NODE_21246_length_135_cov_103.517_potentialcontaminant AUGUSTUS CDS 1 111 . - 0 ID=cds.g2928.t1;Parent=g2928.t1 #PROT g2928.t1 g2928 MGVLRVDTVASLEKVARRDVKFADIAGQALANAQDDP # PASA_UPDATE: g6631.t1, single gene model update, valid-1, status:[pasa:asmbl_5219,status:12], valid-1 NODE_2907_length_4780_cov_31.376 . gene 92 1609 . + . ID=g6631;Name=g6631.t1 NODE_2907_length_4780_cov_31.376 . mRNA 92 1609 . + . ID=g6631.t1;Parent=g6631;Name=g6631.t1 NODE_2907_length_4780_cov_31.376 . five_prime_UTR 92 93 . + . ID=g6631.t1.utr5p1;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . exon 92 321 . + . ID=g6631.t1.exon1;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . CDS 94 321 . + 0 ID=cds.g6631.t1;Parent=g6631.t1;5_prime_partial=true NODE_2907_length_4780_cov_31.376 . exon 582 653 . + . ID=g6631.t1.exon2;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . CDS 582 653 . + 0 ID=cds.g6631.t1;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . exon 1010 1135 . + . ID=g6631.t1.exon3;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . CDS 1010 1135 . + 0 ID=cds.g6631.t1;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . exon 1361 1609 . + . ID=g6631.t1.exon4;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . CDS 1361 1432 . + 0 ID=cds.g6631.t1;Parent=g6631.t1 NODE_2907_length_4780_cov_31.376 . three_prime_UTR 1433 1609 . + . ID=g6631.t1.utr3p1;Parent=g6631.t1 #PROT g6631.t1 g6631 TVNSPLSSFKNTMSGTLRRLKSNFDDGESAEVASIKAAIKQEWSKYKGAGKEKLKHDYMSVMMTWSGFGSAIFDIENNIDKKLPKLMWLAINIQGVSFFKRGDREPLISYPYETILSFGAPIINTYKIVIDGLGPITFETPRVLEIAKLMKAYINELVRRRRARM* # ORIGINAL: g6632.t1 original gene structure, not modified by PASA NODE_2907_length_4780_cov_31.376 AUGUSTUS gene 3114 4631 . - . ID=g6632;Name=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS mRNA 3114 4631 . - . ID=g6632.t1;Parent=g6632;Name=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS exon 4524 4631 . - . ID=g6632.t1.exon1;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS CDS 4524 4631 . - 0 ID=cds.g6632.t1;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS exon 4088 4197 . - . ID=g6632.t1.exon2;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS CDS 4088 4197 . - 0 ID=cds.g6632.t1;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS exon 3665 3765 . - . ID=g6632.t1.exon3;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS CDS 3665 3765 . - 1 ID=cds.g6632.t1;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS exon 3332 3477 . - . ID=g6632.t1.exon4;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS CDS 3332 3477 . - 2 ID=cds.g6632.t1;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS exon 3114 3128 . - . ID=g6632.t1.exon5;Parent=g6632.t1 NODE_2907_length_4780_cov_31.376 AUGUSTUS CDS 3114 3128 . - 0 ID=cds.g6632.t1;Parent=g6632.t1 #PROT g6632.t1 g6632 MQESYKYKDPVTELLECLYVNFDFDGAQHKLRECEKVLNNDFFLVACREEFIENARLFIFETYCRIHQCISIGLLAEKLNMSTEDAERWIVNLIRNARLDAKIDSKDGNVVMGTQIQSVYYQVIEKTKGLSFRSHVLSNNIEKRANSGATMRPFQPDDI* # ORIGINAL: g3064.t1 original gene structure, not modified by PASA NODE_5973_length_667_cov_53.9139_potentialcontaminant AUGUSTUS gene 1 469 . - . ID=g3064;Name=g3064.t1 NODE_5973_length_667_cov_53.9139_potentialcontaminant AUGUSTUS mRNA 1 469 . - . ID=g3064.t1;Parent=g3064;Name=g3064.t1 NODE_5973_length_667_cov_53.9139_potentialcontaminant AUGUSTUS exon 1 469 . - . ID=g3064.t1.exon1;Parent=g3064.t1 NODE_5973_length_667_cov_53.9139_potentialcontaminant AUGUSTUS CDS 1 469 . - 0 ID=cds.g3064.t1;Parent=g3064.t1 #PROT g3064.t1 g3064 MASANRPKRTSSCNKENTLEAVGTASSQPAKLVRLSALADIDEPMSAEAGAAGPTKRNLRTRSTKPIHIDASEDDDEPTQPAPKRRRVLAEKEAAVTAIPTATSKATSASPAPKKAPAKAAKAPAKTAAPRAARKGATIPGLDKGTTLVDAFKKEW # ORIGINAL: g1083.t1 original gene structure, not modified by PASA NODE_1322_length_12114_cov_39.5092 AUGUSTUS gene 7824 9482 . + . ID=g1083;Name=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS mRNA 7824 9482 . + . ID=g1083.t1;Parent=g1083;Name=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 7824 8252 . + . ID=g1083.t1.exon1;Parent=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 7824 8252 . + 0 ID=cds.g1083.t1;Parent=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 8391 8531 . + . ID=g1083.t1.exon2;Parent=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 8391 8531 . + 0 ID=cds.g1083.t1;Parent=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 8703 9482 . + . ID=g1083.t1.exon3;Parent=g1083.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 8703 9482 . + 0 ID=cds.g1083.t1;Parent=g1083.t1 #PROT g1083.t1 g1083 MLRTASRAVGGIARTVSRRQLQSATGVCAPTLLRRTMENTQPMRSIATTPTAPQQPAAEAEKQPFTELVRDFLDPKDFYDSVQRNGIDYFCGVPDSLLKDFCAYVTTNTPATNHVITANEGNGIALAAGYHLATGKYGMVYLQNSGLGNIVNPLMSLAVPEVYSIPMLLLIGWRGEPGKKDEPQHLIQGQSTPGLLASLNIPFQVLPDFQEGAEKVIKQAVRYMEGNQGPYAILVRRQTFLPYKMPSEKGAYEMNREGALKVIVDGLDDRDVVVGTTGMLSRELFEYRVAKKHGHEKDFLTVGSMGHASAIALGIANAKSHRQVFCLDGDGALIMHMGAMVTVGNTQPKNFKHVVINNGAHDSVGGQPTLALREDLNFRDIARACGYKWTALAETKEDAAKKIAELKASDGPGLLEIRVNKGGRKDLGRPTRSPIENKQDFMGFLSDDK* # PASA_UPDATE: g1082.t1, single gene model update, valid-1, status:[pasa:asmbl_1205,status:3], valid-1 NODE_1322_length_12114_cov_39.5092 . gene 5072 7006 . + . ID=g1082;Name=g1082.t1 NODE_1322_length_12114_cov_39.5092 . mRNA 5072 7006 . + . ID=g1082.t1;Parent=g1082;Name=g1082.t1 NODE_1322_length_12114_cov_39.5092 . five_prime_UTR 5072 5135 . + . ID=g1082.t1.utr5p1;Parent=g1082.t1 NODE_1322_length_12114_cov_39.5092 . exon 5072 7006 . + . ID=g1082.t1.exon1;Parent=g1082.t1 NODE_1322_length_12114_cov_39.5092 . CDS 5136 6854 . + 0 ID=cds.g1082.t1;Parent=g1082.t1 NODE_1322_length_12114_cov_39.5092 . three_prime_UTR 6855 7006 . + . ID=g1082.t1.utr3p1;Parent=g1082.t1 #PROT g1082.t1 g1082 MAPTTRTALAVVILCVFGALNCSAAVTYCSRQDPCWPTSADVAALTDALEPKLPRVLAWAGGSAPRVTAVPVSSPNDQPLYGAGVGGLAPVYAESPDDQKGTCFVTPPSGSVFAPLYCLVSLRNVPYNGWTPSFTVWPLKAAHVQAAVRFAVAHNLCIMVAGTGHDFLNRHSCDGGVFIRTSLMKDIEWDLVDKKGFGHPGGNVRFGPGIVFSEAHKSAADNKRVISSGWATTVGIVGWSIGGGHGPFAPSLGLGVDNILEVDIVTANGTLVTANAKQNSDLYWAVRGGGGSTWGVITSITLRAHLIPAGGFALVEAQWSGTMCGDGEAKLDAIIDLHTKFILARDSRFGGLIHITPSASNGSCAAVWTAYLRYVFSGSATDPAATGALAELSSAAAADSIHTSTFGTWYEEMIPQALEPILPLDVLSPSSDGVGGLSSVVVGRDVVTDGRLAKQLKARLFDCKITKQCTRQELYHDITGNPGSPQDPNVSIARGMRTGIVHWVAIMQTHANMDTYYALGESSYFSESSYSMDGNSWQSRYWGDNYPRLLDVKNRWDPQGIFWCHHCVGAED* # ORIGINAL: g1081.t1 original gene structure, not modified by PASA NODE_1322_length_12114_cov_39.5092 AUGUSTUS gene 326 4192 . - . ID=g1081;Name=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS mRNA 326 4192 . - . ID=g1081.t1;Parent=g1081;Name=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 2831 4192 . - . ID=g1081.t1.exon1;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 2831 4192 . - 0 ID=cds.g1081.t1;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 2029 2567 . - . ID=g1081.t1.exon2;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 2029 2567 . - 0 ID=cds.g1081.t1;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 1392 1789 . - . ID=g1081.t1.exon3;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 1392 1789 . - 1 ID=cds.g1081.t1;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS exon 326 1128 . - . ID=g1081.t1.exon4;Parent=g1081.t1 NODE_1322_length_12114_cov_39.5092 AUGUSTUS CDS 326 1128 . - 2 ID=cds.g1081.t1;Parent=g1081.t1 #PROT g1081.t1 g1081 MCSMLTLAALVASFAIVGVASAADDKRNWSQCAPASYCKSHAGDGICDPSCNTVGCFLDGFDCMLSTLHWSWADCPSAAYCVYRIGDGTCHPECNTRGCLWDGLDCASFNTLSGTLSWLLCPTPEDCRVKSGDGVCDPECDMTDCNWDGLDCFRNGAPPASAFASCPLLDYCRYRFADGMCDLECNSAMCMFDGWDCATSNNGGGSSTPGSNPLIPKDSLNQCLYQDLCGIMANNSQCDQLCNTGECEFDGGECDKSDIDDSLTCASHCLQLSSNGICNRECNIDVCNFDDGDCVGAGSSSSGDDLWAFCPNRNCRALADNGVCDESCMRYECMWDFEDCRGILTVRVLNDASKWSLCQHAECQGSYSDGICNSKCDTFVCNWDGFDCDPQSYTTLVDRSWDNCTSSEHCRSVFADGVCDRECNHLACNWDGLDCEKWKLTLSATPIWDSCPVESCKLSYGDMTCDEDCNSAACNWDGLDCVGNMAKKAWETCPNKTACQSFMADGVCSPEEAAMCGSSACLFSASVDCGTGSRLDGGLQVCPAEVACEGRFKDGICDQLCKARECGYDGGDCSDVPLQHIGDVELVVDMMPTMFVDKRKAFQRNLGVLLNGVASIKSARAYILNANDDSSSPDRYKTNVRLSFDAASDSPFRAPIDVAVFLAAMNDAQILSQKVGFGITPVAVAQVQPIDPTPGNKSSGTNVTAIAVACVLSVCGVAVVAGGTVYGVRHVKKNEKRRRESQAVGLGGAGGDLEMERPAKTIKIEYVATPLPDIDTREAVVFHTDPEDIQDSLSPLHIIVATGDHIAVARSIAASRIVNGGMLQCNYDLVGASMNPVHRVDALGNSALHVAAELGHVQIANVLIGEGADVSLKNASGNTPLHVACANERAEMVAALITHRADVFARNAHGRTPLHECAARGAVQCAEALVGACRQHASAKVSGVAHPVDGACALLDAADVDGETALMGAIKANNSDLASKLIEFGASVHCVTARGWSALHWACAVNALPVVVQLLDKGKLDLNATNGKVCNSV* # PASA_UPDATE: g1084.t1, single gene model update, valid-1, status:[pasa:asmbl_1206,status:12],[pasa:asmbl_1207,status:12], valid-1 NODE_1322_length_12114_cov_39.5092 . gene 10359 12102 . - . ID=g1084;Name=g1084.t1 NODE_1322_length_12114_cov_39.5092 . mRNA 10359 12102 . - . ID=g1084.t1;Parent=g1084;Name=g1084.t1 NODE_1322_length_12114_cov_39.5092 . exon 12015 12102 . - . ID=g1084.t1.exon1;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . CDS 12015 12102 . - 0 ID=cds.g1084.t1;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . exon 11709 11780 . - . ID=g1084.t1.exon2;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . CDS 11709 11780 . - 2 ID=cds.g1084.t1;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . exon 10359 11422 . - . ID=g1084.t1.exon3;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . CDS 10611 11422 . - 2 ID=cds.g1084.t1;Parent=g1084.t1 NODE_1322_length_12114_cov_39.5092 . three_prime_UTR 10359 10610 . - . ID=g1084.t1.utr3p1;Parent=g1084.t1 #PROT g1084.t1 g1084 MPTHVTATNRSGLWFCSDTCVFSRRLLKVPAHPSPRGKRPRNDSQQGDGTTEPAPKKRRVVLCPAPAQGRANGATQHTPQTLPHMQHSNSSSYPGNAFAPQRTILPRADERSGSHRGHGQHNQHHHHHQQQQQQQQLQQQQQQQQQQQQQQQQYQQQQQQQQQQQSRRYSVYPQGHPVKMSSSPPPAPLIVNGGTIAKGKMQFTLGVGPAQHRPLTGQALQEVTGAAGGDSNSFYHSSSRHVHSSPHTGYPIYDASVVPVHHGHSLQATAMQGQRASPGSDSMRSYSSVSSVAHDDEDRSALSDAVYSLISLGNSIRVGASEH* # PASA_UPDATE: g4126.t1, single gene model update, valid-1, status:[pasa:asmbl_3717,status:12],[pasa:asmbl_3718,status:12], valid-1 NODE_2189_length_7352_cov_42.7977 . gene 74 1330 . + . ID=g4126;Name=g4126.t1 NODE_2189_length_7352_cov_42.7977 . mRNA 74 1330 . + . ID=g4126.t1;Parent=g4126;Name=g4126.t1 NODE_2189_length_7352_cov_42.7977 . exon 74 247 . + . ID=g4126.t1.exon1;Parent=g4126.t1 NODE_2189_length_7352_cov_42.7977 . CDS 74 247 . + 0 ID=cds.g4126.t1;Parent=g4126.t1;5_prime_partial=true NODE_2189_length_7352_cov_42.7977 . exon 516 620 . + . ID=g4126.t1.exon2;Parent=g4126.t1 NODE_2189_length_7352_cov_42.7977 . CDS 516 620 . + 0 ID=cds.g4126.t1;Parent=g4126.t1 NODE_2189_length_7352_cov_42.7977 . exon 803 1330 . + . ID=g4126.t1.exon3;Parent=g4126.t1 NODE_2189_length_7352_cov_42.7977 . CDS 803 1057 . + 0 ID=cds.g4126.t1;Parent=g4126.t1 NODE_2189_length_7352_cov_42.7977 . three_prime_UTR 1058 1330 . + . ID=g4126.t1.utr3p1;Parent=g4126.t1 #PROT g4126.t1 g4126 PSANIFENLDKDMYNKIRAGTIKCILATDMARHGDILKTFKGHLEVGFDYANADHRAGLMQILIKCADISNEVRPTTVSEQWVDCLLEEFFAQSDLEKLEGLPVAPFMDRDKVTKPGAQIGFIGFVLIPLFETIARMFPQLDEPILQSVKRAHKYYQDMGARLEEEKKKAQEAKVEA* # PASA_UPDATE: g4127.t1, single gene model update, valid-1, status:[pasa:asmbl_3719,status:12], valid-1 NODE_2189_length_7352_cov_42.7977 . gene 1410 2337 . - . ID=g4127;Name=g4127.t1 NODE_2189_length_7352_cov_42.7977 . mRNA 1410 2337 . - . ID=g4127.t1;Parent=g4127;Name=g4127.t1 NODE_2189_length_7352_cov_42.7977 . five_prime_UTR 2275 2337 . - . ID=g4127.t1.utr5p1;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . exon 2071 2337 . - . ID=g4127.t1.exon1;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . CDS 2071 2274 . - 0 ID=cds.g4127.t1;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . exon 1853 1954 . - . ID=g4127.t1.exon2;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . CDS 1853 1954 . - 0 ID=cds.g4127.t1;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . exon 1410 1637 . - . ID=g4127.t1.exon3;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . CDS 1539 1637 . - 0 ID=cds.g4127.t1;Parent=g4127.t1 NODE_2189_length_7352_cov_42.7977 . three_prime_UTR 1410 1538 . - . ID=g4127.t1.utr3p1;Parent=g4127.t1 #PROT g4127.t1 g4127 MSDDDWSDKETGDDDESGGNAQRNAFAARMKANLASNDSLKPVPCEGCKEEVPYALQIKIDGVVFHKSCLRCKVCSKVLSPGNYTALEKSYYCKPHFKQLFQTKGNYSESFGEANPKDKWIDKGGAEESPSASS* # ORIGINAL: g4128.t1 original gene structure, not modified by PASA NODE_2189_length_7352_cov_42.7977 AUGUSTUS gene 2780 4410 . + . ID=g4128;Name=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS mRNA 2780 4410 . + . ID=g4128.t1;Parent=g4128;Name=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 2780 2859 . + . ID=g4128.t1.exon1;Parent=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 2780 2859 . + 0 ID=cds.g4128.t1;Parent=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 3587 3813 . + . ID=g4128.t1.exon2;Parent=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 3587 3813 . + 1 ID=cds.g4128.t1;Parent=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 4253 4410 . + . ID=g4128.t1.exon3;Parent=g4128.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 4253 4410 . + 2 ID=cds.g4128.t1;Parent=g4128.t1 #PROT g4128.t1 g4128 MTEFSLGPLPRGWEESFTRDGESFFIDHNTRRNTREDPRLHKEDLQGNKVKYDKDHFGLPPGWTTHRDPNDVPFFINPANGRSTNEDPRLRPDEERDSKKKQEPLPKGWTAATDPNGASYYIETKTGRTTNNDPRNGDPFGAKSKHRSSVCTIS* # ORIGINAL: g4129.t1 original gene structure, not modified by PASA NODE_2189_length_7352_cov_42.7977 AUGUSTUS gene 5599 6882 . - . ID=g4129;Name=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS mRNA 5599 6882 . - . ID=g4129.t1;Parent=g4129;Name=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 6871 6882 . - . ID=g4129.t1.exon1;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 6871 6882 . - 0 ID=cds.g4129.t1;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 6549 6672 . - . ID=g4129.t1.exon2;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 6549 6672 . - 0 ID=cds.g4129.t1;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 6082 6162 . - . ID=g4129.t1.exon3;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 6082 6162 . - 2 ID=cds.g4129.t1;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS exon 5599 5753 . - . ID=g4129.t1.exon4;Parent=g4129.t1 NODE_2189_length_7352_cov_42.7977 AUGUSTUS CDS 5599 5753 . - 2 ID=cds.g4129.t1;Parent=g4129.t1 #PROT g4129.t1 g4129 MCARVGDTRAFDVSRAEEEEDDDDEEPDLSLITGTLHHRSRPLKDDGNSLSTNVGTVSVRNSKQELVAAGPAADFLSRRTYRGLEQQLGETPVALAVEGRRGIASGYADEKDEAQSIPSELSQ* # ORIGINAL: g17.t1 original gene structure, not modified by PASA NODE_429_length_23886_cov_38.5483 AUGUSTUS gene 14275 17319 . + . ID=g17;Name=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS mRNA 14275 17319 . + . ID=g17.t1;Parent=g17;Name=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 14275 14936 . + . ID=g17.t1.exon1;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 14275 14936 . + 0 ID=cds.g17.t1;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 15236 15622 . + . ID=g17.t1.exon2;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 15236 15622 . + 1 ID=cds.g17.t1;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 15871 16258 . + . ID=g17.t1.exon3;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 15871 16258 . + 1 ID=cds.g17.t1;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 16526 16609 . + . ID=g17.t1.exon4;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 16526 16609 . + 0 ID=cds.g17.t1;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 17035 17319 . + . ID=g17.t1.exon5;Parent=g17.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 17035 17319 . + 0 ID=cds.g17.t1;Parent=g17.t1 #PROT g17.t1 g17 MAAAKGDLDPLREQSREELRNLLKSASTNGPVDLVLDSVLMASLNAIAGYSFLKDSGVARIVELGPGKPPVPSPSQHRVYLLRPDMLTTKLMCDQVRTDARDAAKPCVYSAFFVPRRLSTCDGVLEEEGVHGLFSFLGEFKLDLVAFDADLLSLELPDFFQSVFVDGDVTQIAWVANALQSLQSHVGSFSKVMGVGRVARMVADQLARDKRVHTVADSAVRSKWDSLLLVDRTVDRITPFCSPITYEALVDEIFGISGNAITVDSRTDDQSKGVGATSSPPPAESKRMVLSSTDPVFDEIRDIHFANVGETLKTRTLWLEGHYQSKNDATTIAELKQFIQRLPTLKEVHRCLADHVACAERIMKAKDNEVFMRRRTMEATLLQCEGAEEALKFAEEVMCTGADIREALQLVCLVANTVGLTQAQLDAVRKTVMQVYGYEHMFTLKNLETSGMLRKHDSARAFSDIKGRPLLLVLPPETTVPPESLHAMLDGYAPLSARLIELVIFNLTAPLSWSGLEKTAQKLGGIAFSEPGHGTSSAPSSAKDVRPTTVVAFLGGCTYVERSALRVLAKKHNRNIVVLTTRMVNGATFLDSMVETFDFSA* # ORIGINAL: g18.t1 original gene structure, not modified by PASA NODE_429_length_23886_cov_38.5483 AUGUSTUS gene 18956 21815 . - . ID=g18;Name=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS mRNA 18956 21815 . - . ID=g18.t1;Parent=g18;Name=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 21776 21815 . - . ID=g18.t1.exon1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 21776 21815 . - 0 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 21309 21422 . - . ID=g18.t1.exon2;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 21309 21422 . - 2 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 20704 20799 . - . ID=g18.t1.exon3;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 20704 20799 . - 2 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 20332 20469 . - . ID=g18.t1.exon4;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 20332 20469 . - 2 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 19947 20060 . - . ID=g18.t1.exon5;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 19947 20060 . - 2 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 19417 19692 . - . ID=g18.t1.exon6;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 19417 19692 . - 2 ID=cds.g18.t1;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 18956 19206 . - . ID=g18.t1.exon7;Parent=g18.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 18956 19206 . - 2 ID=cds.g18.t1;Parent=g18.t1 #PROT g18.t1 g18 MQCVGGVATQCPPGSRCVDGVAISCACVRGDCNPFTGTCTCPPNYSGLKCEVSDPPYCKNSGTCDSATGTCACKIFYAGKRCEVFDMCRLTTTTLGHNPCANGGTCVVDSSTAYSCSCSAGFSGSDCSFVCPTADCSEVVCSPGTSTCSGSGNEVSKNVSGQGKKQSVNIGAIVGGVIGGLAAITLAALLVIKFGRGVDRRQMATSTPMTSNIYAAVGRAQQGEGGQGDALAAGFASQEPLYDEIRTPATPIDEIGTPEETFDAPVEGGDAAVHTAPLPRMEHGYATVEQMAEAMSHMEGYVSFPNHGASVSSTDMAQSTNEGDALSVAMVTVSEDAGESNA* # PASA_UPDATE: g16.t1, single gene model update, valid-1, status:[pasa:asmbl_7204,status:3], valid-1 NODE_429_length_23886_cov_38.5483 . gene 3527 13521 . - . ID=g16;Name=g16.t1 NODE_429_length_23886_cov_38.5483 . mRNA 3527 13521 . - . ID=g16.t1;Parent=g16;Name=g16.t1 NODE_429_length_23886_cov_38.5483 . five_prime_UTR 13332 13521 . - . ID=g16.t1.utr5p1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 13251 13521 . - . ID=g16.t1.exon1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 13251 13331 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 13082 13127 . - . ID=g16.t1.exon2;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 13082 13127 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 12622 12722 . - . ID=g16.t1.exon3;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 12622 12722 . - 2 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 12197 12339 . - . ID=g16.t1.exon4;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 12197 12339 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 11571 11703 . - . ID=g16.t1.exon5;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 11571 11703 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 10949 11116 . - . ID=g16.t1.exon6;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 10949 11116 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 10638 10683 . - . ID=g16.t1.exon7;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 10638 10683 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 10158 10172 . - . ID=g16.t1.exon8;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 10158 10172 . - 2 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 9897 9996 . - . ID=g16.t1.exon9;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 9897 9996 . - 2 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 9560 9719 . - . ID=g16.t1.exon10;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 9560 9719 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 9155 9267 . - . ID=g16.t1.exon11;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 9155 9267 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 8659 8740 . - . ID=g16.t1.exon12;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 8659 8740 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 8158 8350 . - . ID=g16.t1.exon13;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 8158 8350 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 7672 7771 . - . ID=g16.t1.exon14;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 7672 7771 . - 2 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 7030 7126 . - . ID=g16.t1.exon15;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 7030 7126 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 6370 6489 . - . ID=g16.t1.exon16;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 6370 6489 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 5822 5922 . - . ID=g16.t1.exon17;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 5822 5922 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 5532 5622 . - . ID=g16.t1.exon18;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 5532 5622 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 5102 5193 . - . ID=g16.t1.exon19;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 5102 5193 . - 0 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . exon 3527 4862 . - . ID=g16.t1.exon20;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . CDS 4193 4862 . - 1 ID=cds.g16.t1;Parent=g16.t1 NODE_429_length_23886_cov_38.5483 . three_prime_UTR 3527 4192 . - . ID=g16.t1.utr3p1;Parent=g16.t1 #PROT g16.t1 g16 MASNAEGEPVYDDDDDGIDEDYGMSDEDDGIRGRAFSTASKQARFHKSTDSLDIDGTDDPDVLKERMKELKSERVKLKEEYHNQKKVRDEELRLKKKEYRKEKRMRQEHILTNLTDDSANIISGWLKFRGALKQWTKYWAILRPGVLMYFRDDKKLEWSGSIILNGCEAIQRPTSKEGFCFKIFHPLEHSIYATRGPRGELLPTVFAPISADHCIVRTGEQEGKAWLSAIQKAAHLTDRDSEEDGVSHASHEYENGADGNSPLLAPQVAADNVPAIVGTTPMIVTPSGDPVQGKPTNYIPKVQGDLEIPQGLQTEEWGEESKNLILTLLKQVRPGMDLSRVVLPTFILEPRSFLDKLSDYYYHVDTLAQAAKQTDPLKRIIGIVRWYLSGFYNRPKGCKKPYNPIIGETYRCAFKHPTGSVTYFVAEQVSHHPPVSAWYASNRAEGYGINGVLLTRSKFYGTSAASILEGQATLSLNNFDEEYILTFPTAQVKGIILGPLIMEMAGHVSITCPKTNYTAEIEFRAKPMIGGEYNTLRGKIRCGKETIFNIQGAYDGQIEIVNAQTKDVETLWSVTNDTKKRRLEKMTVPMDLQGPKESEKLWIKVTEAIDKGDQVAATNEKGNLEDDQRQIHRELKAAERQWEPRLFVTGNAGQWVYKYPNTSPWQPDVDIEEVEVNGIIATKRQVTVSASGAPASAAASSSQHHAVTKQIASVQSDATRMKRAGSHSNVNIAVNAATASHAHVSPSPMKLLTGKPRADSQSKLEAPGASKSAGHSPSLASASIGDASDLGKSVKELRRTVQDLNAWQRETNRWLEGSLRQIARESNANAPKRDRKGLAFNLLLLLVLLLIQAYVQLRMYGYITDDSVSAVVDFVLERFHMLK* # ORIGINAL: g15.t1 original gene structure, not modified by PASA NODE_429_length_23886_cov_38.5483 AUGUSTUS gene 148 3633 . + . ID=g15;Name=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS mRNA 148 3633 . + . ID=g15.t1;Parent=g15;Name=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 148 290 . + . ID=g15.t1.exon1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 148 290 . + 0 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 480 615 . + . ID=g15.t1.exon2;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 480 615 . + 1 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 868 971 . + . ID=g15.t1.exon3;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 868 971 . + 0 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 1182 1331 . + . ID=g15.t1.exon4;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 1182 1331 . + 1 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 1766 1868 . + . ID=g15.t1.exon5;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 1766 1868 . + 1 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 2020 2112 . + . ID=g15.t1.exon6;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 2020 2112 . + 0 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 2344 2636 . + . ID=g15.t1.exon7;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 2344 2636 . + 0 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 2839 2995 . + . ID=g15.t1.exon8;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 2839 2995 . + 1 ID=cds.g15.t1;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS exon 3253 3633 . + . ID=g15.t1.exon9;Parent=g15.t1 NODE_429_length_23886_cov_38.5483 AUGUSTUS CDS 3253 3633 . + 0 ID=cds.g15.t1;Parent=g15.t1 #PROT g15.t1 g15 MLLIPLVVGTDSEYTSNNAPRDFAQLKKLVDCFYSPATSSAKGATADGRTSGSFLLDLFKPFEPHVIAWIDRTEASVQDWATSAFKRDVFVPEVAGMYVSSSAADICGIIAQSYEHLRSIDWKEPALRVHLHSRYVDVMATAIDRYVALLASAGRQWAATGDGDGVAPRLCIILNNTRFVHQKLTDLYELMGIDTIAAEEMRLAKESDKNAEDDSGIRQRYVDMLTQLDRTLFRSVIFYILREMMGYIEPAFRFILGEDNGMTFAQSIGRSGSRFFGRFLSNIVDSFTGDDVDDADGNSGSNASNGRARGDGVSRPGSPVTSRGNEALDRAVQSIVTKLNRDLELLHDNLQPSHFLDIIALLWRGIIVHLTRVVVGPTHWRSSRADAARAALKAVQDVFHAGGEGIPIDVLRSRKYKTLYGYIPLSTLKTREIIAMYLSIGQNDGTISPASPSQPPTKMAPSQSPGAGACRYTRRMLCTALYVRSRADDAMARRFLAEWEQSAEVRGMIDAWETGESHI* # PASA_UPDATE: g9646.t1, single gene model update, valid-1, status:[pasa:asmbl_6976,status:12], valid-1 NODE_4107_length_2177_cov_38.5861 . gene 317 1976 . - . ID=g9646;Name=g9646.t1 NODE_4107_length_2177_cov_38.5861 . mRNA 317 1976 . - . ID=g9646.t1;Parent=g9646;Name=g9646.t1 NODE_4107_length_2177_cov_38.5861 . five_prime_UTR 1925 1976 . - . ID=g9646.t1.utr5p1;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . exon 1519 1976 . - . ID=g9646.t1.exon1;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . CDS 1519 1924 . - 0 ID=cds.g9646.t1;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . exon 1197 1275 . - . ID=g9646.t1.exon2;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . CDS 1197 1275 . - 2 ID=cds.g9646.t1;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . exon 317 995 . - . ID=g9646.t1.exon3;Parent=g9646.t1 NODE_4107_length_2177_cov_38.5861 . CDS 317 995 . - 1 ID=cds.g9646.t1;Parent=g9646.t1 #PROT g9646.t1 g9646 MAWECRDGHKMILQLLDAKGISESSLAQNQRVNCLHTSISDFYAKYNGWNSNATSELFTNLELNSVGCPAGQYNEMATLLHVAGGGIIRRLFLRGTVYNFSFGCLTTLTTVIFVLAVLVSGLALPSGLIIPFLCIGAGIGRAFCVFVNDYIEHSLEGDPGVWAVAGAAAFWCGSGRVALTVAIVITETTGDIKLLPGIFLTVACSKLVADLFDQGLYVVLVLFRKLPFLTDEPSIDLEQRVVGDIMTPIHRLWTLTPTPLVETIVERLENTIHNGFPVIDPHSRRLVGLALRAHLQELISERIPNLDDALETELDIGNIMNKTPSIVTPDTPLAYVFYLFRQIGVRHVCVINDRFELTGFVTRQDFQRVEIATTLFPDAKVNRIVAE* # PASA_UPDATE: g9041.t1, single gene model update, valid-1, status:[pasa:asmbl_3939,status:12], valid-1 NODE_2284_length_6876_cov_36.2814 . gene 416 6653 . + . ID=g9041;Name=g9041.t1 NODE_2284_length_6876_cov_36.2814 . mRNA 416 6653 . + . ID=g9041.t1;Parent=g9041;Name=g9041.t1 NODE_2284_length_6876_cov_36.2814 . five_prime_UTR 416 417 . + . ID=g9041.t1.utr5p1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 416 515 . + . ID=g9041.t1.exon1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 418 515 . + 0 ID=cds.g9041.t1;Parent=g9041.t1;5_prime_partial=true NODE_2284_length_6876_cov_36.2814 . exon 871 941 . + . ID=g9041.t1.exon2;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 871 941 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 1226 1343 . + . ID=g9041.t1.exon3;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 1226 1343 . + 2 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 1797 1892 . + . ID=g9041.t1.exon4;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 1797 1892 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 2098 2255 . + . ID=g9041.t1.exon5;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 2098 2255 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 2444 2522 . + . ID=g9041.t1.exon6;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 2444 2522 . + 2 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 2911 2945 . + . ID=g9041.t1.exon7;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 2911 2945 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 3167 3311 . + . ID=g9041.t1.exon8;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 3167 3311 . + 2 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 3727 3871 . + . ID=g9041.t1.exon9;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 3727 3871 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 4152 4274 . + . ID=g9041.t1.exon10;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 4152 4274 . + 0 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 4475 4568 . + . ID=g9041.t1.exon11;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 4475 4568 . + 0 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 4920 5007 . + . ID=g9041.t1.exon12;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 4920 5007 . + 2 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 5230 5335 . + . ID=g9041.t1.exon13;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 5230 5335 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 5682 5723 . + . ID=g9041.t1.exon14;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 5682 5723 . + 0 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 5942 6039 . + . ID=g9041.t1.exon15;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 5942 6039 . + 0 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 6275 6321 . + . ID=g9041.t1.exon16;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 6275 6321 . + 1 ID=cds.g9041.t1;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . exon 6529 6653 . + . ID=g9041.t1.exon17;Parent=g9041.t1 NODE_2284_length_6876_cov_36.2814 . CDS 6529 6653 . + 2 ID=cds.g9041.t1;Parent=g9041.t1 #PROT g9041.t1 g9041 VSSSTNIAVPIGVAVPVGVVFTMLIVAVVLFRRRKAHLEAELNNMTWRLKPSDLENVSNRAGGSQVFQSKLSVRSELSGTNSMEVNGQIYTTIAKCKGRSVAIRRRRATSKSPLELTRALALEVYHRREARHPNITEFIGACVEPGDVFIATEYCPKGSLEDILANTAVYQLDWMFKFSLATDAARGMEYLHTTPIGVHGRLKSSNCVVDSRWVLKITDFGLESFANAPSDNPDEEENSHKKNSDLFWTAPEVLNGGPKNQAADVYAYGVILNEIMTRDIPYADLMMEPADVITKVKGGHLRPTFSDTAPPELRKVAALCWAADPTARPSFTVALAAVRRCNPDANQSVLDNMSRMLENYANHLEDIVEQRTQALEEEKKKTEELLYRMLPRAVAEDLRVGKQVKAETFDMVTIFFSDIVGFTDIAGQSTPLQVVDLLNDLYTCFDSIIDSYDVYKVETIGDAYMVASGLPTRNENRHAGEIATMALDLLSATTQFRIRHMPDRTLQLRVGMHSGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFGKCIYLRR* # PASA_UPDATE: g7753.t1, single gene model update, valid-1, status:[pasa:asmbl_5092,status:12], valid-1 NODE_2833_length_5019_cov_42.9027 . gene 3472 4760 . + . ID=g7753;Name=g7753.t1 NODE_2833_length_5019_cov_42.9027 . mRNA 3472 4760 . + . ID=g7753.t1;Parent=g7753;Name=g7753.t1 NODE_2833_length_5019_cov_42.9027 . exon 3472 3742 . + . ID=g7753.t1.exon1;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . CDS 3472 3742 . + 0 ID=cds.g7753.t1;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . exon 3852 4006 . + . ID=g7753.t1.exon2;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . CDS 3852 4006 . + 2 ID=cds.g7753.t1;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . exon 4214 4363 . + . ID=g7753.t1.exon3;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . CDS 4214 4363 . + 0 ID=cds.g7753.t1;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . exon 4631 4760 . + . ID=g7753.t1.exon4;Parent=g7753.t1 NODE_2833_length_5019_cov_42.9027 . CDS 4631 4760 . + 0 ID=cds.g7753.t1;Parent=g7753.t1;3_prime_partial=true #PROT g7753.t1 g7753 MAAHDDLKRLFVSIGVNEQKAEETARNEKLASSLKALVDLASATGAVDKPKGLLLYGIATRFPGTAKEAAKKALAAHVAAGKIKSDTQLTSALDYIKGHPTIESLDAEFDKHCGVGVEITADDIKRAVAALIKSREAELKEKRYQFVGTLLSALKVELRWADGKAVKDELDSQVAAILGPRTAEDDAPAKGKAKKDDKKPEATEKAAAAPKATAPAQAGDGEEKTFSGAVLHFHK # ORIGINAL: g7752.t1 original gene structure, not modified by PASA NODE_2833_length_5019_cov_42.9027 AUGUSTUS gene 57 2596 . - . ID=g7752;Name=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS mRNA 57 2596 . - . ID=g7752.t1;Parent=g7752;Name=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 2414 2596 . - . ID=g7752.t1.exon1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 2414 2596 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 2104 2274 . - . ID=g7752.t1.exon2;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 2104 2274 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 1592 1795 . - . ID=g7752.t1.exon3;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 1592 1795 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 845 1306 . - . ID=g7752.t1.exon4;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 845 1306 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 497 592 . - . ID=g7752.t1.exon5;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 497 592 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS exon 57 188 . - . ID=g7752.t1.exon6;Parent=g7752.t1 NODE_2833_length_5019_cov_42.9027 AUGUSTUS CDS 57 188 . - 0 ID=cds.g7752.t1;Parent=g7752.t1 #PROT g7752.t1 g7752 METSGDAIAVGGTGAPPRRRSFSQAARGFFTGEGKKNEDLKQVLEIGSQKEKTEAMRKVVGMMAKGKDVSDLFPNVVKNVVSPSVELKKLVYVYLVRYAEQEQDTALLSINSFQKDQLNKNQLIRASALRVMSSIRVPVIVPLIMIAIKQAVADMSPYVRKHAAHAIPKLYSLDEEQKDQLMETLERLMGDMSTLVLGSAVMAFEEVCPERIDMIHKHFRKLCSAVVDSDEWGQVAILNLLLRYSRTQFTDPNKSEITGVAGGKDRPFYSDDESNSDSSASEKDTKQIDLSQGGMMDPDHRLLLKSVAPLLLNRNSAVVLAVAEIFHYLAPSGELGPAAKALVRMLRSQREIQHVIVSNVATMSATRPRMFEPYLKQFFVRATDASFVRLQKLEVMTNIATEANISAILQACCRV* # ORIGINAL: g8290.t1 original gene structure, not modified by PASA NODE_3455_length_3426_cov_39.872 AUGUSTUS gene 64 2790 . - . ID=g8290;Name=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS mRNA 64 2790 . - . ID=g8290.t1;Parent=g8290;Name=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 2598 2790 . - . ID=g8290.t1.exon1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 2598 2790 . - 0 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 2107 2226 . - . ID=g8290.t1.exon2;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 2107 2226 . - 2 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 1650 1738 . - . ID=g8290.t1.exon3;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 1650 1738 . - 2 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 1159 1316 . - . ID=g8290.t1.exon4;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 1159 1316 . - 0 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 748 916 . - . ID=g8290.t1.exon5;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 748 916 . - 1 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 301 366 . - . ID=g8290.t1.exon6;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 301 366 . - 0 ID=cds.g8290.t1;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS exon 64 108 . - . ID=g8290.t1.exon7;Parent=g8290.t1 NODE_3455_length_3426_cov_39.872 AUGUSTUS CDS 64 108 . - 0 ID=cds.g8290.t1;Parent=g8290.t1 #PROT g8290.t1 g8290 MLGSMGVVPAYVKPALLTYSPLFGGRCCLLQQTETIEIGIKSITGATFDGPSLATISIQPAGGMFFDAKESRLSRLAYFMDFQFENVAIKHEFFKLFQSRKYYAGDVLAKEGEKRQLHFFVIENGTATISLVGTVVELGPGDSYGEVYLLYDVPYISTVTATSNMTVWMMDKDAYLKYELLHPDITKVVEQKFMKRILSMRVRKPPVLLFPGLASSRLVAWQRKRCVGFGVEIGEHVWVSVEKLVQTLTTDSRCWLECMALGPNQLWYQAIHGERYNLW* # ORIGINAL: g3115.t1 original gene structure, not modified by PASA NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS gene 116 675 . - . ID=g3115;Name=g3115.t1 NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS mRNA 116 675 . - . ID=g3115.t1;Parent=g3115;Name=g3115.t1 NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS exon 475 675 . - . ID=g3115.t1.exon1;Parent=g3115.t1 NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS CDS 475 675 . - 0 ID=cds.g3115.t1;Parent=g3115.t1 NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS exon 116 265 . - . ID=g3115.t1.exon2;Parent=g3115.t1 NODE_4977_length_1101_cov_33.461_potentialcontaminant AUGUSTUS CDS 116 265 . - 0 ID=cds.g3115.t1;Parent=g3115.t1 #PROT g3115.t1 g3115 MQQLDLQLSETEARLRGTETRLEDAEAAARAAEKKCAVVEEKARVDSDAARMEKAEGKRARGSTSAQQGNASQVEQLETSLNDCELELEGWSRGASELARVVGLPSNGTDVGMRDIL # ORIGINAL: g1107.t1 original gene structure, not modified by PASA NODE_4202_length_2033_cov_39.4305 AUGUSTUS gene 22 1887 . - . ID=g1107;Name=g1107.t1 NODE_4202_length_2033_cov_39.4305 AUGUSTUS mRNA 22 1887 . - . ID=g1107.t1;Parent=g1107;Name=g1107.t1 NODE_4202_length_2033_cov_39.4305 AUGUSTUS exon 22 1887 . - . ID=g1107.t1.exon1;Parent=g1107.t1 NODE_4202_length_2033_cov_39.4305 AUGUSTUS CDS 22 1887 . - 0 ID=cds.g1107.t1;Parent=g1107.t1 #PROT g1107.t1 g1107 MVMTSMTAWSVDRAINEPECAAVLASGSASFSVSTGAQISLNGCDGFALDDHASAVTDAMDIWVQDPDGVDTVPVQYFWKTDGLSRLRVVGGTLAALQFMSTYQAIGVFLGSSSVTFEDISVPYVVGVYDDPAFPSDFLDVLKSPQFIVSGNATAAFTRVSLAPSVWSFNKLLRGKHAFLVSGQASLSIDGLSCYKCPGVVHAIERASVIVSNVTVSGGNSMPPDIFFDENQSNLGDPEVVAGTLFWLEGSSTFSASHVRLTRLTRAIRGGVGYVGDDARATIVDMVAMTAGGCQITGGGFYVGNRGQLHVEASSFSRTFSFCDFRNKDPGGRGGFVYMDGHSHVVIENVSFDQLQATDGGFIYATGNARASVNGARITTTTASNQGGGIFLGGSASAHVRNMVASEVFAGSEGGLFFATDLSTLDADAVDLHDSESYRGAVFSSRGSATVRLGHVASNNTLCYATFPPGILFGPIFWESRRLAEFRLVPDSIYTSTDPFGALSGCALYASDSSIVNLDTVSVSSIDTIYSTGGLSMSGYASLSAANVSFSEIQSSREGGALRVDFRASLSAQNVTIIDINSKAIGACGIAVGDASIRIKELHVENCVSFGGGCFHAVDSAN # ORIGINAL: g14065.t1 original gene structure, not modified by PASA NODE_4219_length_2006_cov_171.004 AUGUSTUS gene 738 1986 . - . ID=g14065;Name=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS mRNA 738 1986 . - . ID=g14065.t1;Parent=g14065;Name=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS exon 1825 1986 . - . ID=g14065.t1.exon1;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS CDS 1825 1986 . - 0 ID=cds.g14065.t1;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS exon 1578 1698 . - . ID=g14065.t1.exon2;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS CDS 1578 1698 . - 0 ID=cds.g14065.t1;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS exon 903 1405 . - . ID=g14065.t1.exon3;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS CDS 903 1405 . - 2 ID=cds.g14065.t1;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS exon 738 776 . - . ID=g14065.t1.exon4;Parent=g14065.t1 NODE_4219_length_2006_cov_171.004 AUGUSTUS CDS 738 776 . - 0 ID=cds.g14065.t1;Parent=g14065.t1 #PROT g14065.t1 g14065 MEIMRYCRTAFDSKDGGLVLGADVGHDYGQYVTDLFAEIMKGDSVDYLGIMNYFDTTPRFINGDPIEGGGVLPNLKLSTKVPMIFGSESIDVNSAPDWASFNQEGYYPMESTLLAAKKAASSNPLFGGVAIHHYLSYFALKAGVNKGDSIDTSIPTQSSSSSSSSSTKSSSSSTSTKSSSSSTSTKTSTSSTSAPTGLPTRAVLKCTKSGTTTTVTGLGTNVLCVMRTDNYNAARPASGTVVLSSASAVTEVELYTTYTGAQDCSGWIGNVACS* # PASA_UPDATE: g13942.t1, single gene model update, valid-1, status:[pasa:asmbl_5966,status:12], valid-1 NODE_3387_length_3575_cov_300.752 . gene 1 3403 . - . ID=g13942;Name=g13942.t1 NODE_3387_length_3575_cov_300.752 . mRNA 1 3403 . - . ID=g13942.t1;Parent=g13942;Name=g13942.t1 NODE_3387_length_3575_cov_300.752 . five_prime_UTR 3372 3403 . - . ID=g13942.t1.utr5p1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 3372 3403 . - . ID=g13942.t1.exon1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 2870 2935 . - . ID=g13942.t1.exon2;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 2870 2935 . - 0 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 2531 2669 . - . ID=g13942.t1.exon3;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 2531 2669 . - 0 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 2080 2403 . - . ID=g13942.t1.exon4;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 2080 2403 . - 2 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 1693 1967 . - . ID=g13942.t1.exon5;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 1693 1967 . - 2 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 1408 1547 . - . ID=g13942.t1.exon6;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 1408 1547 . - 0 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 1081 1274 . - . ID=g13942.t1.exon7;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 1081 1274 . - 1 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 780 916 . - . ID=g13942.t1.exon8;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 780 916 . - 2 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 333 540 . - . ID=g13942.t1.exon9;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 333 540 . - 0 ID=cds.g13942.t1;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . exon 1 126 . - . ID=g13942.t1.exon10;Parent=g13942.t1 NODE_3387_length_3575_cov_300.752 . CDS 1 126 . - 2 ID=cds.g13942.t1;Parent=g13942.t1;3_prime_partial=true #PROT g13942.t1 g13942 MPCDDNVTHCLNNADGADKEIQCTQCGKKVNSKTYLRHFATKHADLSSLSVTLVDTKRLMFLVRKASTGPASPVHCQLRPGELPAFMCGKAECMSNWNLMVQDKKPEWHCKHANAARAHRNWAALVKQPQPAISLQTKYLTELLERNNVTQECHDQLLDLDGAATKVNTSMLVKFQDPVMATSSASYFSVFSGLERQTAAKGDALPIVEDTIRTLVTIPDRTDVATIGKVLKASWHCECQVAQAKGKKACVHIHAVMWHLVQELLVAQGVECGDVARVEDGDVGARAAGLAVPSAPKARTYCSYVSIGEAKANMKYLLTHKMIPFTSISALNIAPSLPNNNELWASESVCHNLECNGEPLCRGPTTPGKIYDRDNQTYMVTLISRQCKRCSRIYRYQTSEHGVFNFNNKKLFTLRFMAHIKTQFHNGVPFQEMAQMIRDLHHPCSLPPTQDLINAYAAFEALLDQELPPCPKCGFFPPVLVLDNCAKVCYERPKNITLQDMRDRVPKNFDGQVNIKDAWTRVKMAALVHGVASHLA # ORIGINAL: g5077.t1 original gene structure, not modified by PASA NODE_3390_length_3572_cov_37.9857 AUGUSTUS gene 145 1750 . - . ID=g5077;Name=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS mRNA 145 1750 . - . ID=g5077.t1;Parent=g5077;Name=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS exon 1486 1750 . - . ID=g5077.t1.exon1;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS CDS 1486 1750 . - 0 ID=cds.g5077.t1;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS exon 938 1123 . - . ID=g5077.t1.exon2;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS CDS 938 1123 . - 2 ID=cds.g5077.t1;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS exon 557 653 . - . ID=g5077.t1.exon3;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS CDS 557 653 . - 2 ID=cds.g5077.t1;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS exon 145 259 . - . ID=g5077.t1.exon4;Parent=g5077.t1 NODE_3390_length_3572_cov_37.9857 AUGUSTUS CDS 145 259 . - 1 ID=cds.g5077.t1;Parent=g5077.t1 #PROT g5077.t1 g5077 MGASSDERAGQRRGSQTTTNQLPLALRIDLFSMDARRASRSLLVISIAFHIVYLYSVFHVNFTSPITQGIPPIDTPRPAPADRLVLIVADGLRADKLFESCASGSSPFLHAIASRTGTFGIAHTRVPTESRPGHVAMMAGFYEDVSAVTKGWKENPVDFDSIFNRTRHSWAWGSPDILNIFTRGGSPTYTAACYPDNQDFGKENPSMLDDWVFDSFSEFIK # PASA_UPDATE: g13856.t1, single gene model update, valid-1, status:[pasa:asmbl_1013,status:12],[pasa:asmbl_1014,status:12], valid-1 NODE_1266_length_12561_cov_47.3501 . gene 207 4352 . + . ID=g13856;Name=g13856.t1 NODE_1266_length_12561_cov_47.3501 . mRNA 207 4352 . + . ID=g13856.t1;Parent=g13856;Name=g13856.t1 NODE_1266_length_12561_cov_47.3501 . exon 207 2310 . + . ID=g13856.t1.exon1;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . CDS 207 2310 . + 0 ID=cds.g13856.t1;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . exon 2483 3337 . + . ID=g13856.t1.exon2;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . CDS 2483 3337 . + 2 ID=cds.g13856.t1;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . exon 3777 4352 . + . ID=g13856.t1.exon3;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . CDS 3777 4162 . + 2 ID=cds.g13856.t1;Parent=g13856.t1 NODE_1266_length_12561_cov_47.3501 . three_prime_UTR 4163 4352 . + . ID=g13856.t1.utr3p1;Parent=g13856.t1 #PROT g13856.t1 g13856 MTCPNRYYVRVWAFNGAGLSVSATSNGVVVDSTSPTPGIVTHNPLYPSNPGFQILRTILYADWTGFSDQESGIIDYAWYARPLNHSVLATPETKRGHLGTDPMSREHLGVRSIGIESQVTMQLGEKYHVLVEAENGAGIGSAIVSSQPFMVDFTPPLAGWVEHAFDASTTPTTLTVRWDRFADPESDIVKYTVLVGSFFYGGDYTTLDVAPDSTKVPMSVSVRGVASPFSVAVIATNGAGLRNAQPMQSRTKDPLLIIARKELTCFDAANVDRTVVLADNALLADTTSPTGADVDFQPFSCSVGASWDFTKACGKNGLVCANIARFEWSVRSTLPGYTNGDVLCGEFRYAGPGTKLAGYSFGSVAYPGYMYSMLLCSGAYKMAESASYVFQVRAVMKDNTCFMAESDGFSIFTDEPKPNTLGGARVLDGTTAGADVDYQSRRDLVAANWDQAFASIPRVDSYQWALGLVPFADQIMPFGPISGGGAASASKTLLQELPLGTRLYVTVRAMTITGLVFERVSDGIIVDNQKPTPGIVLDGQGPLDIDYTTDDTRVQSVWRGFEGLYSPLVEYSFAVGTLLGPEDLMKWTPVALQTNATFESLAVEKKRLVHGMAIYVFVRVLNAVGLVSDVAHSDGVVVDISPPTVGAVWWVVGSSTCGHSNATQSPATPCVQRDATSVTLAWSGFSDDESFIERYSLAIGTVPAGEQVSPFVDVSRFKSSTTRSNLALPHSAFLYATVVAYNNAGLSSLARTHSLLIDETPPIAPPAVIDGSGVVDVDVQSDTLISASWPGFSDPESNIRDYAWAIGFEPGVFGRNDPLPLTSVGLSTSASFRVLDDKRPVANALRRYYVTVEATNNVGLKSRSVSNGVVVSDKDPRKGKVLPYGFDGMPTSFVATNTSLIFKIEGFSDTDSGLASYEFTLRDYATLTNVTSGSISAAFDYIRLSGLSLGQGLTYMLDVTAHSNADRIVQANSDLVTVDLTPPVFKGKIEFCWETTSAIVIAWNVRDDDSQDSQVTSDFAIGRQHSANDVLDFTTARFDAGVGTANLWCVVDAADFPVFVKNCRYFTDKNTFCYYSPRDLIDSPISDLNEYFATVRATNKAGLSVQVTQRVKTS* # PASA_UPDATE: g13857.t1, single gene model update, valid-1, status:[pasa:asmbl_1015,status:12], valid-1 NODE_1266_length_12561_cov_47.3501 . gene 4848 12521 . - . ID=g13857;Name=g13857.t1 NODE_1266_length_12561_cov_47.3501 . mRNA 4848 12521 . - . ID=g13857.t1;Parent=g13857;Name=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 12440 12521 . - . ID=g13857.t1.exon1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 12440 12521 . - 0 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 12074 12229 . - . ID=g13857.t1.exon2;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 12074 12229 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 11532 11981 . - . ID=g13857.t1.exon3;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 11532 11981 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 11048 11425 . - . ID=g13857.t1.exon4;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 11048 11425 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 10423 10932 . - . ID=g13857.t1.exon5;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 10423 10932 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 8434 10177 . - . ID=g13857.t1.exon6;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 8434 10177 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 8075 8355 . - . ID=g13857.t1.exon7;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 8075 8355 . - 1 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 7471 7986 . - . ID=g13857.t1.exon8;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 7471 7986 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 7230 7306 . - . ID=g13857.t1.exon9;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 7230 7306 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 6823 7108 . - . ID=g13857.t1.exon10;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 6823 7108 . - 0 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 5668 6642 . - . ID=g13857.t1.exon11;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 5668 6642 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . exon 4848 5526 . - . ID=g13857.t1.exon12;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . CDS 5036 5526 . - 2 ID=cds.g13857.t1;Parent=g13857.t1 NODE_1266_length_12561_cov_47.3501 . three_prime_UTR 4848 5035 . - . ID=g13857.t1.utr3p1;Parent=g13857.t1 #PROT g13857.t1 g13857 METSFFDFATYLTEDLQPPVPPTPVTPDVSTDKTIVTWGCYAPSEFDEIEPFSGKLPRATDRLNDDVPLIQSAQKVTFGGVEPHVLFFNPPVSASTHMPTIAVTLLGEDSRAFTARGFDQLTGRPVVMPALATILSAEIESLSPTPRSLIVARNSNAVHFNLDDCKQTPSVCKQFPSAVTVGVVPSSVTWICEETGPSKTRKIGTSTVPTSALGIGVDFRTSMIGAAVGSWQFLQGAGLDSLDGTIHVHLEPGASLQYPLKAKAHGTLLVDGVRIYSSSVPQVEIVFHDARASTAGVASTVTLKTESVDSVVLNDGAPGNNLYEWSSFVVADASNLTVTNAATSPVSFQLMLRGEVTETCHMAVAFDVAGFDEERFDDGYLAIQNVTIVLPFVQMSQQAPLPTLPTMLVARDYTGLVGSQFGGDVIVDIASVFGHGIANKMGNRFCELKRNDTLAAYVCDLAASTDLSDTIKTWMRGAQARVIFSPAAFQMNKNVQIPDLATAEGVLWSGERDLWSKLTLTIHYEDIQSCGADAALPQFVWHSLCHCPCAADGCGTVVDAPMVFCINSAINTTVDEGLCSGVERSGLVTCGKQCNCDAGCSGCWSALPIASDAGQCTKDAGSSVTAYSREQNVTCNLCKGPSVVFKNVDKSYCQAPALPTHVPCSPTDVLPVGAVWDELQSLRIVQISSERSTMDMEIVLGVPAVAARQALAEAEAALAEAQLRVLSSNASMSMKVPVAEAEAALMTAKVETLRQSEILRTGLVQQSIVAELAEAKTRERQALAGLVEPLAGKTLSRIEVLGAGYNLVRANPHCVDDPFGMRGIVPLVDLSYTSMTLVGNKFLPDGVHATELSTADFNSDMEILTSESELRESAKLGIKFSVEEDSAEELASQKTAFSLNSEFSTESQKMRSSKDVFVRNKVTMTVARMNLLPNFANIARPSAALFDYWRSIVIDDDCCLSDSPTDCNSNCNALERMPDVFGTHLMKAVTLGCIGMQQLQLNIVEVKSLVENDQSTDATASSEMTEGKPSAGLGATTKVSSEVSVALKKAMQSASSSSSQKIQEKYLGGTPQPGGFFEDGQVNNNALKLYAGTCKDNPFITDYTLMRVDEFIEQMGPAKFEEDHDVFATKLKKFRIILREYCAGIANCAPDARDADRIDPVLFNDIARFTYTHFNTNLFTLTIVPMTDSINNVGITSDISGAKDSIIDLSPDDEVCFPTVMGDHNDWVNDPDILDFPGMAWWLSDSPQFPGCSGRYCAGEFRMLRVVPAAATYVACRKACQDTSTCVAGTFVSNPLSGMLSGDMYHVAVAQCVLFLTSLLTEGTIIHAWNFDNHFGWRQHWHGRLLSWRCGAVPVRPWDAFGLRSFRKHSADGDNAKENSLFRIAYPVEEHIDISDKTLRYGKGFILASKNGCLSEVTQDPEKVLYRWSVTNVKPTPDGKTRCVIFRFLSRVLPVGTVVSYADSVFIEASTTNFTMDTRNFVFNRRPSLFVAPADANGTLSTVQIIAQNSPGSDLQSFSWSISRGASLSVAQSIGEGTTSEFNFEASASVEQSLTSAQVTIKFSIPVSRVSIPVAFATAVKTIGKESIATYALRLIKSDFVITVRRLSEASDPYSTATNEAPASMRFVPGRQSDDIYVINVTFASQLGPQDSIFVSLVAPDNIIGTDGKQVASVAAKSPVAIRMSMPTSIWAVLSCQILDPVTKNSTIIGRLHFSQMVMDNEKDSVSPSDFSVYSDNKLVNYAFDIHSRDGGVAMSPDDTITPLASSTFSFSVSIPDGINYSSVTIGVDSGRVYTLGLTLFPSSARAALQTATASPLKVCIMGAGKAWYASDTSDGDGAGNPPPVAPVPNQPSPTPTDKGKELVKLADVQQLVNDVVSTKTAELKSQTKAWSGAATIGAILGGLSFVVLVIGCIMAYRHRWAVKRMIQRETRFMVGTAAEIVMHENEGFAPETRNPLHTMSTGLSSSAAVTAAADHESDGL* # PASA_UPDATE: g6387.t1, single gene model update, valid-1, status:[pasa:asmbl_9947,status:12],[pasa:asmbl_9953,status:12], valid-1 NODE_909_length_15972_cov_42.3474 . gene 13733 15845 . - . ID=g6387;Name=g6387.t1 NODE_909_length_15972_cov_42.3474 . mRNA 13733 15845 . - . ID=g6387.t1;Parent=g6387;Name=g6387.t1 NODE_909_length_15972_cov_42.3474 . exon 15795 15845 . - . ID=g6387.t1.exon1;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . CDS 15795 15845 . - 0 ID=cds.g6387.t1;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . exon 15535 15666 . - . ID=g6387.t1.exon2;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . CDS 15535 15666 . - 0 ID=cds.g6387.t1;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . exon 13733 15382 . - . ID=g6387.t1.exon3;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . CDS 13811 15382 . - 0 ID=cds.g6387.t1;Parent=g6387.t1 NODE_909_length_15972_cov_42.3474 . three_prime_UTR 13733 13810 . - . ID=g6387.t1.utr3p1;Parent=g6387.t1 #PROT g6387.t1 g6387 MVYVELMAPWHGISVMAMAASLGPIILEGIVTDLDEEIRNVRFVFEKKQGEVSTAKTLAEKINAGDASEPTLAIAADDFDEFSDTLSAEQRQFLSSQRRMSDPTATDATVVARRGSASWKLMASLADLRLLKKREQRDKVWKTFKERLQLRESIQRSLGSAKGAGEPTVYELQKLKQQYMALHARMEQCALRLDLLAAKIAGSSIEAKYMTNGPDGSGLDLIGRIDVSERAELAAHLDRYSDAILELLSKKMSHAHRNGYYLQSMTLPPPRGQPGTPEIPGPSTNVPQSLIQQQQQQQQQQQQQQQQQQQQQQVKLEAGVVAAPVVTRASVAAVVAGPTKSQNHLDAPPLHRPSMSISAPSSPQSAHHAREPPPIAPIELTAADFCMIMADDVIGDAEMARNNRELRELLMAPPPLQSSASMSLSMAPQLSSFRGPESASGSPIGNGMSSSPWQQQQPPSELVASAIPPAVQAAMNGLSQGGAHHGAPMGTLTPSASFSFHSGVSASPSFSGALYSSPSVSGPSMSPSLRAGVPGSALYGPERQGLAELQLVLQLNDVLALASKSGLRGSLDYPPPDETLAYPT* # PASA_UPDATE: g6386.t1, single gene model update, valid-1, status:[pasa:asmbl_9952,status:12], valid-1 NODE_909_length_15972_cov_42.3474 . gene 9241 12755 . - . ID=g6386;Name=g6386.t1 NODE_909_length_15972_cov_42.3474 . mRNA 9241 12755 . - . ID=g6386.t1;Parent=g6386;Name=g6386.t1 NODE_909_length_15972_cov_42.3474 . exon 12548 12755 . - . ID=g6386.t1.exon1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . CDS 12548 12755 . - 0 ID=cds.g6386.t1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . exon 11701 12347 . - . ID=g6386.t1.exon2;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . CDS 11701 12347 . - 2 ID=cds.g6386.t1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . exon 10899 11426 . - . ID=g6386.t1.exon3;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . CDS 10899 11426 . - 0 ID=cds.g6386.t1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . exon 10415 10619 . - . ID=g6386.t1.exon4;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . CDS 10415 10619 . - 0 ID=cds.g6386.t1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . exon 9241 10189 . - . ID=g6386.t1.exon5;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . CDS 9450 10189 . - 2 ID=cds.g6386.t1;Parent=g6386.t1 NODE_909_length_15972_cov_42.3474 . three_prime_UTR 9241 9449 . - . ID=g6386.t1.utr3p1;Parent=g6386.t1 #PROT g6386.t1 g6386 MEQRHASQHSSPAPMRHSEGRLRGMMRIPRSRPRVWVTILLVAGAMMVGTLMLATSVEDMGDADSESNEAADVNLHPFLLLLPPVPPTPPPAAHTTLQQTEFAMPGSAPKAVLRAKRHLHPGEKPGTMKYNCKPIVAKVPLNLYVKRDVGKKPGTDTMVDELKYAFYNTMPYRAYMAALKRLAIKPTKIISDAQLIITDGNGHRDLHRKHSNLFKRGKIIVSTVLGTAPAGGGKELQLVAKRLLAARGGCQYDTFDVQPGTFSVYDEVECTEFDRMLDSPDAYKQMWIIKPKSGEKGRGISVVRGDDPKLATIHAVACAFMREKRTYDIISSNNTDGVDELDASFGKGKILGGSASDSEEDGQSRQALLSAANTSSLTVEELMKIVVPQRRGRSNHIVQKYITNPLLLFGTKFDMRSYFLIACTHPFVVFYRGGYVRRAMATYNPSMLNDTQSHLTNTHVQESQTGYNGSDHVWSMEKLQTYLSRTYKDVVSNDFVESKVEKFMKKMAMVIFESARPSIIRERGGFQLIGMDFMMDANLQVQFIEANGKPGFGYQNRWKTQFGVDFGVDMFDLVITLNSDPSVIPRLKEGRSVNGFEVLYNEHIDDCSGRIDSPDAPKPELATDACRALSRMKELNSAVFNKYIQARGAPAPEPVVFLEPPRARVKPDIGNVPAVEEEAAPNSNSDGESDDVDSGANGDADSGANDNGANGNADNGANGDADRGADSGADDADSGANDSGANGDADRGGDGAEGDQGDGNVAGAGTGNDDREGEA* # PASA_UPDATE: g6384.t1, single gene model update, valid-1, status:[pasa:asmbl_9948,status:3], valid-1 # PASA_UPDATE: g6384.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9949,status:12],[pasa:asmbl_9950,status:13], valid-1 NODE_909_length_15972_cov_42.3474 . gene 3481 6971 . + . ID=g6384;Name=g6384.t1 NODE_909_length_15972_cov_42.3474 . mRNA 3481 6730 . + . ID=g6384.t1;Parent=g6384;Name=g6384.t1 NODE_909_length_15972_cov_42.3474 . five_prime_UTR 3481 3515 . + . ID=g6384.t1.utr5p1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . exon 3481 4304 . + . ID=g6384.t1.exon1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . CDS 3516 4304 . + 0 ID=cds.g6384.t1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . exon 4681 4773 . + . ID=g6384.t1.exon2;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . CDS 4681 4773 . + 0 ID=cds.g6384.t1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . exon 4959 5107 . + . ID=g6384.t1.exon3;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . CDS 4959 5107 . + 0 ID=cds.g6384.t1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . exon 5348 5410 . + . ID=g6384.t1.exon4;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . CDS 5348 5410 . + 1 ID=cds.g6384.t1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . exon 5558 6730 . + . ID=g6384.t1.exon5;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . CDS 5558 5666 . + 1 ID=cds.g6384.t1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . three_prime_UTR 5667 6730 . + . ID=g6384.t1.utr3p1;Parent=g6384.t1 NODE_909_length_15972_cov_42.3474 . mRNA 3481 6971 . + . ID=g6384.t1.1.5b6be70c;Parent=g6384;Name=g6384.t1 NODE_909_length_15972_cov_42.3474 . five_prime_UTR 3481 3515 . + . ID=g6384.t1.1.5b6be70c.utr5p1;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 3481 4304 . + . ID=g6384.t1.1.5b6be70c.exon1;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 3516 4304 . + 0 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 4681 4773 . + . ID=g6384.t1.1.5b6be70c.exon2;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 4681 4773 . + 0 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 4959 5107 . + . ID=g6384.t1.1.5b6be70c.exon3;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 4959 5107 . + 0 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 5348 5410 . + . ID=g6384.t1.1.5b6be70c.exon4;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 5348 5410 . + 1 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 5558 5662 . + . ID=g6384.t1.1.5b6be70c.exon5;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 5558 5662 . + 1 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . exon 5892 6971 . + . ID=g6384.t1.1.5b6be70c.exon6;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . CDS 5892 6297 . + 1 ID=cds.g6384.t1.1.5b6be70c;Parent=g6384.t1.1.5b6be70c NODE_909_length_15972_cov_42.3474 . three_prime_UTR 6298 6971 . + . ID=g6384.t1.1.5b6be70c.utr3p1;Parent=g6384.t1.1.5b6be70c #PROT g6384.t1 g6384 MVAHRVPGVFLAVAVCIAFAGWASACTLSDGACICTKTDCKRPLEPINIPDNDKFIVYTTSKGGDRLAPSTLAFAPAKNGGWQSYAIDAGSTFQTIVGFGGAFTDAAALTISKLEPELRELLLDGYYGEGGIGYSLGRVPMASCDFSTHSYSYNDVAGDMTMSSFDVSADKELKLPLIKSAILRAKSRSMPYGGSRMSLFASPWSAPAWMKETDSMLGGKLNGTAGDVVHKAWALYYSKFLSAYAAEGVDFWAVTTQNEPTQKVRWDSMAFTAETQRDFVKMDLGPQLAADHPDVKIIILDDQRPLLPDWATTVLSDPDAAKYVSGVGVHWYSEVNDIIDRFDRLSKTAALHPDKFILATEACEGYLPLPLLNGPSLGDWGRGMTYAHDILGDLNNFAVG* #PROT g6384.t1.1.5b6be70c g6384 MVAHRVPGVFLAVAVCIAFAGWASACTLSDGACICTKTDCKRPLEPINIPDNDKFIVYTTSKGGDRLAPSTLAFAPAKNGGWQSYAIDAGSTFQTIVGFGGAFTDAAALTISKLEPELRELLLDGYYGEGGIGYSLGRVPMASCDFSTHSYSYNDVAGDMTMSSFDVSADKELKLPLIKSAILRAKSRSMPYGGSRMSLFASPWSAPAWMKETDSMLGGKLNGTAGDVVHKAWALYYSKFLSAYAAEGVDFWAVTTQNEPTQKVRWDSMAFTAETQRDFVKMDLGPQLAADHPDVKIIILDDQRPLLPDWATTVLSDPDAAKYVSGVGVHWYSEVNDIIDRFDRLSKTAALHPDKFILATEACEGYLPLPLLNGPSLGDWGRGMTYAHDILGDLNNFAVGWTDWNIALDIKGGPNHARNFVDAPIICDVAEDDSGNLQPQNNATRFFRQPMFYALAHFSAFIPPGSVRVAINLAGTSIGAPEIGAFRRPDGAFAVVALNSSPLFKKVYSIAHPGTGQFANLEMPAASMQTILFK* # ORIGINAL: g6385.t1 original gene structure, not modified by PASA NODE_909_length_15972_cov_42.3474 AUGUSTUS gene 7564 8529 . - . ID=g6385;Name=g6385.t1 NODE_909_length_15972_cov_42.3474 AUGUSTUS mRNA 7564 8529 . - . ID=g6385.t1;Parent=g6385;Name=g6385.t1 NODE_909_length_15972_cov_42.3474 AUGUSTUS exon 7564 8529 . - . ID=g6385.t1.exon1;Parent=g6385.t1 NODE_909_length_15972_cov_42.3474 AUGUSTUS CDS 7564 8529 . - 0 ID=cds.g6385.t1;Parent=g6385.t1 #PROT g6385.t1 g6385 MPSLGRVLRRVFGRREKPVSIPEAAPALPEINGIFDGANGANGANGDAVHPVQEDALPPLVDDDVWARVSHVVPQPSSDFAISDNVLGALDDVDHTPILPLTHAADEDGSAANDDGDVQEEEPVSRANFLSERLFDSRPFGNASALSDDEDDNLDDIMPAPRRLDEQDPMAAILRNSGLLRPFGGDAPSVAARHEGINFTRTDSSVGADGYRTSTFTAMINVGDAAIPIIGIIRARATVLGARSGDGESSGDAEGGDATPTATNPNDDSEPSEEERAHMRTLEDIAVLGSLLEFIEWLRRRELARRTVEAQLIRKQCLAGG* # PASA_UPDATE: g6383.t1, single gene model update, valid-1, status:[pasa:asmbl_9946,status:12], valid-1 NODE_909_length_15972_cov_42.3474 . gene 220 2763 . - . ID=g6383;Name=g6383.t1 NODE_909_length_15972_cov_42.3474 . mRNA 220 2763 . - . ID=g6383.t1;Parent=g6383;Name=g6383.t1 NODE_909_length_15972_cov_42.3474 . five_prime_UTR 2525 2763 . - . ID=g6383.t1.utr5p1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 2150 2763 . - . ID=g6383.t1.exon1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 2150 2524 . - 0 ID=cds.g6383.t1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 1931 2029 . - . ID=g6383.t1.exon2;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 1931 2029 . - 0 ID=cds.g6383.t1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 1547 1694 . - . ID=g6383.t1.exon3;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 1547 1694 . - 0 ID=cds.g6383.t1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 1263 1424 . - . ID=g6383.t1.exon4;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 1263 1424 . - 2 ID=cds.g6383.t1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 645 770 . - . ID=g6383.t1.exon5;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 645 770 . - 2 ID=cds.g6383.t1;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . exon 220 349 . - . ID=g6383.t1.exon6;Parent=g6383.t1 NODE_909_length_15972_cov_42.3474 . CDS 220 349 . - 2 ID=cds.g6383.t1;Parent=g6383.t1;3_prime_partial=true #PROT g6383.t1 g6383 MSVELWNNKPYLVVRWLLWMTVLGVAVVDWIVHRAVRTRGWQLHRSVVVVVILYFLKECVTLAWSNSDDSSATYFAVIFFYDLADAAFMCLLMVIASGWKITRDDLTGYKFGLVLGPMLFFFSDIVVDYIVEQEIGHDGIQTHKIKISSDTLRNILLFASALNAGALFYLWIWIFQSNKIERRKLEVKMLVQRNEIPIVVLRRAMGEVAAPTEAPPVYTEPAPDATRTSTASLSAVQMTSTDRLSRDVGDVPAQSTNPFAEPPLGAPPAYSAPATVPNLYTEVTMPTVGASGTAASQAPAVMQDFDAFGLHESTAPATDSEGEDDTPFGPTDANDQIPDMAKLRLL # PASA_UPDATE: g12311.t1, single gene model update, valid-1, status:[pasa:asmbl_3536,status:12], valid-1 NODE_2108_length_7701_cov_38.7015 . gene 3787 7573 . + . ID=g12311;Name=g12311.t1 NODE_2108_length_7701_cov_38.7015 . mRNA 3787 7573 . + . ID=g12311.t1;Parent=g12311;Name=g12311.t1 NODE_2108_length_7701_cov_38.7015 . five_prime_UTR 3787 3800 . + . ID=g12311.t1.utr5p1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 3787 4001 . + . ID=g12311.t1.exon1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 3801 4001 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 4234 4350 . + . ID=g12311.t1.exon2;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 4234 4350 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 4534 4740 . + . ID=g12311.t1.exon3;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 4534 4740 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 5053 5217 . + . ID=g12311.t1.exon4;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 5053 5217 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 5400 5558 . + . ID=g12311.t1.exon5;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 5400 5558 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 5744 6316 . + . ID=g12311.t1.exon6;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 5744 6316 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 6721 6924 . + . ID=g12311.t1.exon7;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 6721 6924 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . exon 7351 7573 . + . ID=g12311.t1.exon8;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . CDS 7351 7557 . + 0 ID=cds.g12311.t1;Parent=g12311.t1 NODE_2108_length_7701_cov_38.7015 . three_prime_UTR 7558 7573 . + . ID=g12311.t1.utr3p1;Parent=g12311.t1 #PROT g12311.t1 g12311 MAIMSTDARSEAGDSAGTAGGPITCPHCGGVVEIVADVAGGLVCTGCGAVVDGVLLHADVDFEDNNVVGVRVGQHSTGVSARRQFVPTLLKNGTVARRSFRAVSGEDRAHGALRRLVVSMGLGVRISEQAHSLFRALISVGFFRRFGKAGRVAGAACVYVAARQNKVPVTMMEIADSIHCNVFELGRVFSRIMRHAGLSVPEHDPAVFIESFVAAALPDAAVDERMAVGKHAARILTFSKERWLDTGRRPSCLAAAAVALAIDISAGATAAGSRRSRVKGISAVSSIGGISVTGVRARYGELADLLTAKCQLLPWGADISRSNVLAHGASLLDNADLIMAAYGSGERPSHETPMIEHPSMLALQAPQPAALVDGSAERRESGDAIPNPDPPSIRPPSALSGCPATPPAYVRCDMERRRRIEKLKRAKERLKATLGEAAAGLSVGAHEMPASAMEALSERDTEDLVVERLLLAGKDDEFILQYRTRDAHSLADLLWSQREASSRNSPALTDDPVYDAPLSDSELCDEDMPDDELRSYVLSSAEILAMEHLRSKLEHGFECGDASHEDNNGDAHRNSDVDCDSGVQNSRAVPKRRREGGEKRCGKRAAVAHT* # ORIGINAL: g12310.t1 original gene structure, not modified by PASA NODE_2108_length_7701_cov_38.7015 AUGUSTUS gene 511 3383 . - . ID=g12310;Name=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS mRNA 511 3383 . - . ID=g12310.t1;Parent=g12310;Name=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS exon 2584 3383 . - . ID=g12310.t1.exon1;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS CDS 2584 3383 . - 0 ID=cds.g12310.t1;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS exon 1981 2259 . - . ID=g12310.t1.exon2;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS CDS 1981 2259 . - 1 ID=cds.g12310.t1;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS exon 1645 1701 . - . ID=g12310.t1.exon3;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS CDS 1645 1701 . - 1 ID=cds.g12310.t1;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS exon 854 1346 . - . ID=g12310.t1.exon4;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS CDS 854 1346 . - 1 ID=cds.g12310.t1;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS exon 511 645 . - . ID=g12310.t1.exon5;Parent=g12310.t1 NODE_2108_length_7701_cov_38.7015 AUGUSTUS CDS 511 645 . - 0 ID=cds.g12310.t1;Parent=g12310.t1 #PROT g12310.t1 g12310 MATAHRIFIRNARRMSTTAPNIPPAGAATRTGLPIAQTPTPLAAGINRGLEILRRTALPYGDGPNAAGVATPAPQHVQFIFNNTPRLADAARIANKEQQAAERRKRTEAQLPPSWHVERVVRTLCQNDATGDEMLYVLNYMHVYGFHLPRTVSVGLHTLVKHGKAADAIAVFDRLRTVMASLDTDMDAANNAGAGHVGLESAHQQDQPKPGVQRANAGQQHLERTGTPASSAGTSLVESAYACVVGAAIMMDDVGKCMEYIQEMEMRGITPRARILIPVMAAMLTLNMQAEAWDVYGRFKQHKIPLENDAFAILLEGMAATTSPKFRAKSAEIFADMRLTGGPYSDDVVEAARLYFESQRIIEGIPWRIAKVDVDANQSGVCAGCGHSLEQLTLSAEKRDQLMEAIRTMLRDADQLEEFKNFHRWLKAHGPFEVVLDGLNVGHLDHMAFSPTRFSQILNHFVGLGYRVMGLLRNTNRSAFHKQLDDRVYYAASGRADDLYWLYAALDSNLGAIVVTNDMMRDHARMLGENLRHDFKRWQRAHQVKISMAPGKAPVVESPSTVDPVLQGTAKSWHVPGESNWLCVTQH* # ORIGINAL: g13361.t1 original gene structure, not modified by PASA NODE_10266_length_310_cov_392.796 AUGUSTUS gene 77 310 . - . ID=g13361;Name=g13361.t1 NODE_10266_length_310_cov_392.796 AUGUSTUS mRNA 77 310 . - . ID=g13361.t1;Parent=g13361;Name=g13361.t1 NODE_10266_length_310_cov_392.796 AUGUSTUS exon 258 310 . - . ID=g13361.t1.exon1;Parent=g13361.t1 NODE_10266_length_310_cov_392.796 AUGUSTUS CDS 258 310 . - 2 ID=cds.g13361.t1;Parent=g13361.t1 NODE_10266_length_310_cov_392.796 AUGUSTUS exon 77 157 . - . ID=g13361.t1.exon2;Parent=g13361.t1 NODE_10266_length_310_cov_392.796 AUGUSTUS CDS 77 157 . - 0 ID=cds.g13361.t1;Parent=g13361.t1 #PROT g13361.t1 g13361 SSTPAPPVLTSASTASIMTSSPTPSAPSGAQMPPEARTTTTTSS # ORIGINAL: g1975.t1 original gene structure, not modified by PASA NODE_3440_length_3463_cov_46.629_potentialcontaminant AUGUSTUS gene 2 352 . + . ID=g1975;Name=g1975.t1 NODE_3440_length_3463_cov_46.629_potentialcontaminant AUGUSTUS mRNA 2 352 . + . ID=g1975.t1;Parent=g1975;Name=g1975.t1 NODE_3440_length_3463_cov_46.629_potentialcontaminant AUGUSTUS exon 2 352 . + . ID=g1975.t1.exon1;Parent=g1975.t1 NODE_3440_length_3463_cov_46.629_potentialcontaminant AUGUSTUS CDS 2 352 . + 0 ID=cds.g1975.t1;Parent=g1975.t1 #PROT g1975.t1 g1975 RFQSRVLGEVFRCYQEGEIDLSSVPAGTLEACFKDSARSVRQYSGRHKQEKGARNAERYAYKIAGIERPSSSFDTESVTEMDEFTEEAFPNDIELDDDTVKLMIDTFDTRQTQNGM* # ORIGINAL: g10196.t1 original gene structure, not modified by PASA NODE_1727_length_9503_cov_37.7248 AUGUSTUS gene 2125 5687 . - . ID=g10196;Name=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS mRNA 2125 5687 . - . ID=g10196.t1;Parent=g10196;Name=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 5598 5687 . - . ID=g10196.t1.exon1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 5598 5687 . - 0 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 5193 5410 . - . ID=g10196.t1.exon2;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 5193 5410 . - 0 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 4726 4811 . - . ID=g10196.t1.exon3;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 4726 4811 . - 1 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 4278 4465 . - . ID=g10196.t1.exon4;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 4278 4465 . - 2 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 3362 3756 . - . ID=g10196.t1.exon5;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 3362 3756 . - 0 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 3006 3137 . - . ID=g10196.t1.exon6;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 3006 3137 . - 1 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 2645 2774 . - . ID=g10196.t1.exon7;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 2645 2774 . - 1 ID=cds.g10196.t1;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS exon 2125 2316 . - . ID=g10196.t1.exon8;Parent=g10196.t1 NODE_1727_length_9503_cov_37.7248 AUGUSTUS CDS 2125 2316 . - 0 ID=cds.g10196.t1;Parent=g10196.t1 #PROT g10196.t1 g10196 MSDSEASEDHAADAPTEEEEDDTNVTFESLGIVAPLCDACRQMGYTKPTKIQRESIPIALQDRDIIGLAETGSGKTASFALPILQALLDKPQPLFALVLTPTRELAFQISEQFEALGANIGIKCAVVVGGIDMMTQAIALSKKPHVIIATPGRIVDHLENTKGFHLRTLKYLVMDEADRILNMDFEEEVDKILKVIPRERRTYLYSATMTSKVAKLQRASLRNPVKVEVSAKYKTVDNLRQQYIFVPSKHKDCYLAYVLNELAGNSVIIFASTCANVQRAALMLRNLGFAAIPLHGQMTQPNRLGALNKFKAQTRSILIATDVASRGLDIPHVDVVINLDIPTHSKDYIHRVGRTARAGRSGRSLTIVTQYDVELFQRIEQLIGKKIEPFVTQEEEVLLLLERVSEAQRIANMEMREEALKKKRGRDDEDGGGDGGDAQNGGKKARYTASKAHPAQSSRGGGRGGRGGRGGGRGRR* # PASA_UPDATE: g10197.t1, single gene model update, valid-1, status:[pasa:asmbl_2453,status:12], valid-1 NODE_1727_length_9503_cov_37.7248 . gene 6123 9224 . + . ID=g10197;Name=g10197.t1 NODE_1727_length_9503_cov_37.7248 . mRNA 6123 9224 . + . ID=g10197.t1;Parent=g10197;Name=g10197.t1 NODE_1727_length_9503_cov_37.7248 . five_prime_UTR 6123 6288 . + . ID=g10197.t1.utr5p1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 6123 6309 . + . ID=g10197.t1.exon1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 6289 6309 . + 0 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 6449 6512 . + . ID=g10197.t1.exon2;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 6449 6512 . + 0 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 6930 7054 . + . ID=g10197.t1.exon3;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 6930 7054 . + 2 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 7441 7872 . + . ID=g10197.t1.exon4;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 7441 7872 . + 0 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 8328 8446 . + . ID=g10197.t1.exon5;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 8328 8446 . + 0 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 8789 8867 . + . ID=g10197.t1.exon6;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 8789 8867 . + 1 ID=cds.g10197.t1;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . exon 9165 9224 . + . ID=g10197.t1.exon7;Parent=g10197.t1 NODE_1727_length_9503_cov_37.7248 . CDS 9165 9224 . + 0 ID=cds.g10197.t1;Parent=g10197.t1 #PROT g10197.t1 g10197 MSKHPVYRIMVVGDASLRKRLVLTYLNIDDVSNVSMHSFKKQANIANTVSIIEVVPFEGDDPLDFSAYTQTIRTADGIIVACGCDTPKWIDTAGLLKQRILTVLDGATVSLVFAGDLNSSGSNSNTAESEVSEHVGARFFDVNDCDVTVVDRCFYSAAHASVERRRDGSDSGEDVASKRKGLTKSTSTKMMRRTPSQDGLVEGNIKDGIITSSEGPAAFSFNMYFEFQALIANVGSDCEVSFAIFDKSTNTFVSEPFVVPLTMYGVPPDDRAGKVSTVFVCRQACRRLLTHTFVPTNRI* # PASA_UPDATE: g10195.t1, single gene model update, valid-1, status:[pasa:asmbl_2454,status:12], valid-1 NODE_1727_length_9503_cov_37.7248 . gene 108 1791 . + . ID=g10195;Name=g10195.t1 NODE_1727_length_9503_cov_37.7248 . mRNA 108 1791 . + . ID=g10195.t1;Parent=g10195;Name=g10195.t1 NODE_1727_length_9503_cov_37.7248 . exon 108 241 . + . ID=g10195.t1.exon1;Parent=g10195.t1 NODE_1727_length_9503_cov_37.7248 . CDS 108 241 . + 0 ID=cds.g10195.t1;Parent=g10195.t1;5_prime_partial=true NODE_1727_length_9503_cov_37.7248 . exon 468 579 . + . ID=g10195.t1.exon2;Parent=g10195.t1 NODE_1727_length_9503_cov_37.7248 . CDS 468 579 . + 1 ID=cds.g10195.t1;Parent=g10195.t1 NODE_1727_length_9503_cov_37.7248 . exon 980 1791 . + . ID=g10195.t1.exon3;Parent=g10195.t1 NODE_1727_length_9503_cov_37.7248 . CDS 980 1402 . + 0 ID=cds.g10195.t1;Parent=g10195.t1 NODE_1727_length_9503_cov_37.7248 . three_prime_UTR 1403 1791 . + . ID=g10195.t1.utr3p1;Parent=g10195.t1 #PROT g10195.t1 g10195 ADFGMTVAGEAAPEELLQQRGTLIYMAPEVIESLPYSTAADVYSFGIILSEVFIEEQPYDDVISGTNDKIKSIEELSRFISQENYRPEMSLDMPLEYSKLVTACWSHFPSERPSFGHILKCLESIERTALAPPELSDGGNNRLSRTLRSRVSLVTASNPRMLLVPPSVVSGGDTDVNSTHAMPGGTGAGAPCASAIGNTNPVVRQSSLRLPAIQSECDDKAE* # PASA_UPDATE: g1288.t1, single gene model update, valid-1, status:[pasa:asmbl_4436,status:3], valid-1 NODE_2498_length_6058_cov_53.8566 . gene 167 2335 . + . ID=g1288;Name=g1288.t1 NODE_2498_length_6058_cov_53.8566 . mRNA 167 2335 . + . ID=g1288.t1;Parent=g1288;Name=g1288.t1 NODE_2498_length_6058_cov_53.8566 . five_prime_UTR 167 206 . + . ID=g1288.t1.utr5p1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 167 389 . + . ID=g1288.t1.exon1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 207 389 . + 0 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 521 602 . + . ID=g1288.t1.exon2;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 521 602 . + 0 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 749 888 . + . ID=g1288.t1.exon3;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 749 888 . + 2 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 1058 1201 . + . ID=g1288.t1.exon4;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 1058 1201 . + 0 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 1380 1502 . + . ID=g1288.t1.exon5;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 1380 1502 . + 0 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . exon 1803 2335 . + . ID=g1288.t1.exon6;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . CDS 1803 2006 . + 0 ID=cds.g1288.t1;Parent=g1288.t1 NODE_2498_length_6058_cov_53.8566 . three_prime_UTR 2007 2335 . + . ID=g1288.t1.utr3p1;Parent=g1288.t1 #PROT g1288.t1 g1288 MRIFPTCPLLRYFTVIVLAFCALVCAAEEEFCSAFGAHANMAASGPTYKAVVIGGTGAVGGNVVREFLSSPRCTQVSSIGRRKTDVFDGHPNASKLKQYVEPDLGQYSKETHEAISGSEVAVCALGVGQPSKVPKAELEKVDVDYARVFAKACKEAGVKHISLLGSVGADKTSSMNYMRVKGLAEEALAEQGFDSVSCFRPSLLQTKDIRYGVADRINQFLFPKISWMLNRNYHEVPVEQLARAMRINSENLLGKATGVEFLHYPEFERIWAAEPQQSGAQPQADAKCGTA* # PASA_UPDATE: g1289.t1, single gene model update, valid-1, status:[pasa:asmbl_4437,status:3], valid-1 NODE_2498_length_6058_cov_53.8566 . gene 3596 5997 . + . ID=g1289;Name=g1289.t1 NODE_2498_length_6058_cov_53.8566 . mRNA 3596 5997 . + . ID=g1289.t1;Parent=g1289;Name=g1289.t1 NODE_2498_length_6058_cov_53.8566 . five_prime_UTR 3596 3801 . + . ID=g1289.t1.utr5p1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . exon 3596 4149 . + . ID=g1289.t1.exon1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . CDS 3802 4149 . + 0 ID=cds.g1289.t1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . exon 4291 4526 . + . ID=g1289.t1.exon2;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . CDS 4291 4526 . + 0 ID=cds.g1289.t1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . exon 4618 4682 . + . ID=g1289.t1.exon3;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . CDS 4618 4682 . + 1 ID=cds.g1289.t1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . exon 4994 5358 . + . ID=g1289.t1.exon4;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . CDS 4994 5358 . + 2 ID=cds.g1289.t1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . exon 5504 5997 . + . ID=g1289.t1.exon5;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . CDS 5504 5581 . + 0 ID=cds.g1289.t1;Parent=g1289.t1 NODE_2498_length_6058_cov_53.8566 . three_prime_UTR 5582 5997 . + . ID=g1289.t1.utr3p1;Parent=g1289.t1 #PROT g1289.t1 g1289 MRASVEPRQAAQPYDINQRRHTHSSRDAAPPRGYYQLHTRHASRSHSNSPHASDPSVNAAAMPRPSPPATMGERQPAHATSTLKLGVVRLGKLCGKHKYMVIDATDIPFVRQFAFQARLELDRDGTGARIVAYAYHVMGQGCSTTSHTRSERPRSSAAALTSPNGEESGTGDADDAPVASMSSMLNEGPFHDLLWQYHFGKIPSGYTLRHRNSVSVDNRISNLDLVPLDQSYLLWSRRAVPQSQSGDASIYVAALNQLREQEREVVEGCHVGAGSAAFSVYPSLALDANGDAFFETGDAALFYECQNVSCTQMESEIREFHLCGRCRVARYCGPACQQMDWNRHRLECIPFRGYDGAMSPNAR* # ORIGINAL: g6545.t1 original gene structure, not modified by PASA NODE_1917_length_8552_cov_39.0333 AUGUSTUS gene 324 2974 . - . ID=g6545;Name=g6545.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS mRNA 324 2974 . - . ID=g6545.t1;Parent=g6545;Name=g6545.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS exon 324 2974 . - . ID=g6545.t1.exon1;Parent=g6545.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS CDS 324 2974 . - 0 ID=cds.g6545.t1;Parent=g6545.t1 #PROT g6545.t1 g6545 MSSSASNQDPAKDSTPAASASLLRGSGQYSRGIPINDASDYSEQSEEDFALAVSPPKFDKPKSRKKGLRFSSGGGGSGGGRTRHHVTSAAQQHASKEHLQWPERGGGSTRPTPTLTTSSHLHAQMPGVLNSGGGGRPRRALSVTSLEATSGSSPGKGGQASTHGHSHHSHSHSPGAGHTHGPGLGQWAALGMSAGAQQQQQQQQNRRHKRMQKAERKEARQIKGDGSSMWSVAASRSEDAAQTVLKRPPLAHAASASASASASASTPTAVDLAQRSREKWYAHMSQFIRDHLPPSRGVAGSANKAALRHRSNSTSEAPPPVDRKAYSRSLWLEIRAALAGRSTDDEMADVEHLRATIPTVIMDVNAFHVRPGECGDDAIAAVCRVLADVESVESSFMSRGHMAQELGAAASGLFAYTGSASSTASLGGAHVPPPQSPRGATDVGSSGGGSGMFAHPGGFGQGPPAHPQSMQGHGPGHVAPLSPSYAMPSSSERHQYGRRVDALVTWLNVYSSLRRSCTMASDWWHMVGIDEAPQAALAEMCASPACRSYFDDRLTYVGLSGTLHQVSRAIEPALEKARDAMSEFEREFASMGLVSYVGMLCYLARVPPAVAHFLISRRLEHKPTDPSHLSVQTLVCEFREALEEGVRTKLVHVQLVTPPVPRLARQHSQAHGVQSHTGQTTPHHGGGRRHASSLSSHYHSRQQSMDGIGDAPTPQPQQTQQQQASPPPQQQQQQQQQQQQQQYTPHHQQTQQQLHTAQLLSQATLQSLLSATGSSGSLTLAFAPESEWEWDPHAADHDLAEMEDVLSSTVNAYLTLLPLWSKCLQKLPRNTGEFRDIIESEWLFVKDVFSHIHGAEARVCIQFCDLTTQLFEDTRAYLDAGLD # ORIGINAL: g6546.t1 original gene structure, not modified by PASA NODE_1917_length_8552_cov_39.0333 AUGUSTUS gene 6360 8485 . + . ID=g6546;Name=g6546.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS mRNA 6360 8485 . + . ID=g6546.t1;Parent=g6546;Name=g6546.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS exon 6360 7590 . + . ID=g6546.t1.exon1;Parent=g6546.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS CDS 6360 7590 . + 0 ID=cds.g6546.t1;Parent=g6546.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS exon 8211 8485 . + . ID=g6546.t1.exon2;Parent=g6546.t1 NODE_1917_length_8552_cov_39.0333 AUGUSTUS CDS 8211 8485 . + 2 ID=cds.g6546.t1;Parent=g6546.t1 #PROT g6546.t1 g6546 MDDEDIDIVSDSGGVGDGLQLQLHSADGRSPLASSLLQHQHHSGALLHSHGAAGGLGLSPTRGTTNAQLLTELAEPAWMLDSHWGVESADVDERSRAVIESMLLEEEFYFNNNAAGAVGVTPNVAAVNGGMQQREARSAPGTKRAAEPAHGHTHKRSRAQDSPTDAAGEGVVSSQSKLSRRSAGEGVGSRRRERDGAQGQSRLQQTQGQSGQSQRPQSHNVPWSAAEIALFERGIKRFGKGKWKRIAGHVATRTALQVKNFARQYFRRKQRSRGIGGATGGRVGDTDADADADSDADADADASDRAERVGDAGAGDGSTDDDADAGGGSSAVGGAMSGTDGGGAGGIGAAGVGVGVGSAFAAAMILNEALGLRRGDVNNSGHDAPLDDDVGDDEEIDIDIGDGEPLPPAAVMTDPSADDVYQALLKAAKVSPSRDVDSDSGERVGEGQTIEHADADDDEAGRSQRRSQRRHTGSTLPADDQRRRVGGDGEVRRVELLSCPS* # PASA_UPDATE: g5572.t1, single gene model update, valid-1, status:[pasa:asmbl_5021,status:12], valid-1 NODE_2795_length_5103_cov_37.8331 . gene 106 4918 . + . ID=g5572;Name=g5572.t1 NODE_2795_length_5103_cov_37.8331 . mRNA 106 4918 . + . ID=g5572.t1;Parent=g5572;Name=g5572.t1 NODE_2795_length_5103_cov_37.8331 . exon 106 1971 . + . ID=g5572.t1.exon1;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 106 1971 . + 0 ID=cds.g5572.t1;Parent=g5572.t1;5_prime_partial=true NODE_2795_length_5103_cov_37.8331 . exon 2287 2551 . + . ID=g5572.t1.exon2;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 2287 2551 . + 0 ID=cds.g5572.t1;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . exon 2848 2969 . + . ID=g5572.t1.exon3;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 2848 2969 . + 2 ID=cds.g5572.t1;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . exon 3514 3695 . + . ID=g5572.t1.exon4;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 3514 3695 . + 0 ID=cds.g5572.t1;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . exon 3918 4515 . + . ID=g5572.t1.exon5;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 3918 4515 . + 1 ID=cds.g5572.t1;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . exon 4781 4918 . + . ID=g5572.t1.exon6;Parent=g5572.t1 NODE_2795_length_5103_cov_37.8331 . CDS 4781 4918 . + 0 ID=cds.g5572.t1;Parent=g5572.t1 #PROT g5572.t1 g5572 ATDDARATFIKAQISAQYSAGAAAAAPAGLADYLPPLNVANFPVNQGSAVDSAALVGAAVNPTGRLNTIRITFYTQSVQGASTDATVRVRIRFANGWYPRPIYVARSQATFASGSVVTYRFQLASADANALTGIAEVGLSHDGTGFSPNWAIERLVITIEKLPAAADETVHVFFDAIVAANGAEITSTAVTANPSLYTLRLFTGCAPGSATSAVIVARIDGSVSNITRSFRNINMFRTCGVDDIVLPVAAPIGVVSRLFLSNDGGVETADAGETPAWTLDRAWVALDNGNKIAFDVRPAPVSAALPANNVVAGRADVTYTASAAAYAATEMILGVQTGSGVDSGIVGPVRLIVNSGIAGTADQALQTDLFRFAPGTLRYVHFGIAASIVAAADPKPVLKITSTVVGRWRIQMFRIIVEGATKGADRIIETYPAVLPVAGGGQVDEQLCNFAAPAFAVCMITCCRTAADLKFDTECALLSPKHPQWSFNTGSSPTVAETATCDLTYLYYCRAMYPAGSFPDAIYVTLCTGLYKIIHQNLDAYAFLLASNWWPGMKKAYREGTTPIIDIKSLPDYNRFVAATLPNKQPAERDAILDPMIRKVKLKVVGDWRFRTNSPIVEEAIRATHALLPEYAGASQLSDFIQYSSAGSTDVTSDIDINLKAPPGKAGTEFVVMFFNKAFRDKYNMESLQLYDVNLYSEDFLPRDYSPKEIADPAFVFYKDIDTLRTAHADGDIWSIFKMNMFARPAQIDLMKPAAQQLFHCSLINDYPQYYGGNVADDGTVTPVPVPAMDVRKARLLTESTARYDRAGQLVVYFRALVAYRLMQMDTPRSWNTIVAAIPVAARPTWTALYITPGNVGLPTFDALAGNQNAASEIVRGFEDLPLTNPTMQSYYKRARNSLYEQILKHRYRVHKRLLAYDARTDLTRVEITEQRALRLLFANIVSFMDALALEAYVTRGAVWYILSYVQIGKGDENLSEEDRGGAPPGPDPVVNLDQDLMLQAFHENIADAYKEFNEIPEVYEALKGNAQEAALNELKVFEVGYPVIRNFILLPPSFV* # PASA_UPDATE: g9898.t1, single gene model update, valid-1, status:[pasa:asmbl_6779,status:12], valid-1 NODE_3966_length_2436_cov_36.1118 . gene 102 2035 . + . ID=g9898;Name=g9898.t1 NODE_3966_length_2436_cov_36.1118 . mRNA 102 2035 . + . ID=g9898.t1;Parent=g9898;Name=g9898.t1 NODE_3966_length_2436_cov_36.1118 . five_prime_UTR 102 103 . + . ID=g9898.t1.utr5p1;Parent=g9898.t1 NODE_3966_length_2436_cov_36.1118 . exon 102 317 . + . ID=g9898.t1.exon1;Parent=g9898.t1 NODE_3966_length_2436_cov_36.1118 . CDS 104 317 . + 0 ID=cds.g9898.t1;Parent=g9898.t1;5_prime_partial=true NODE_3966_length_2436_cov_36.1118 . exon 541 2035 . + . ID=g9898.t1.exon2;Parent=g9898.t1 NODE_3966_length_2436_cov_36.1118 . CDS 541 1838 . + 2 ID=cds.g9898.t1;Parent=g9898.t1 NODE_3966_length_2436_cov_36.1118 . three_prime_UTR 1839 2035 . + . ID=g9898.t1.utr3p1;Parent=g9898.t1 #PROT g9898.t1 g9898 SRTNNLNALFYQHLALSLQQSLCGDITMGRWGAVSAGDFFLLFNDRLTSIVHIVAVGNGFVTFQLRGLEFKGTYCQQRELEAINRNVALETEGMLCFKCVGRAPGMLTFNAALAARWCSWELVSAECVVDSYSIVLNPAASMFNTFEFKMSVLKHLVGALSFLVVASPHLLEWIGDGSVVANALDALPDDHALSGAQFSSQCDPDYDEARHGVSLASFDAFFGDWIRFCVARRSENGNVAPIPADVAHTKRALRLCFLLGAFARRRIHVVGLGPTVGAEDSFVAGYSSLFRGHCQLSAPDDSWAVSDSVRLGVYVRHAARLSMKLHQDSFSCGDEFDDQEAYYTSLADAETDMIICHEDDPLWRRGVLSGRPTLLTLRHDVDEGGRGGEHSVLMLNRRHLNYRLLKMNREGVRGLWAGQQHELVFLRNRNNERGSIQQMKAVLRNIVNQSCDLPIGYPIYVSPLITSCVPVSPLWASMKRALVAAAGAWEVVTKKAGEAIAFS* # PASA_UPDATE: g282.t1, single gene model update, valid-1, status:[pasa:asmbl_6367,status:12], valid-1 NODE_3658_length_3012_cov_84.1988 . gene 833 2353 . + . ID=g282;Name=g282.t1 NODE_3658_length_3012_cov_84.1988 . mRNA 833 2353 . + . ID=g282.t1;Parent=g282;Name=g282.t1 NODE_3658_length_3012_cov_84.1988 . exon 833 1116 . + . ID=g282.t1.exon1;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . CDS 833 1116 . + 0 ID=cds.g282.t1;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . exon 1339 1973 . + . ID=g282.t1.exon2;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . CDS 1339 1973 . + 1 ID=cds.g282.t1;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . exon 2184 2353 . + . ID=g282.t1.exon3;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . CDS 2184 2206 . + 2 ID=cds.g282.t1;Parent=g282.t1 NODE_3658_length_3012_cov_84.1988 . three_prime_UTR 2207 2353 . + . ID=g282.t1.utr3p1;Parent=g282.t1 #PROT g282.t1 g282 MAAVARITRSLIGARQAILFAAASCRSVHNSTSSPAQAAASPNQRKLKVMSPAQVSLFDKDGFILLNDFWTAQEKKDLLKWTEDVASWPETPGKWMQYFEVKNGKRLLCRTENILPFHSGLEHLVRGKLTDACSDLFGEDAVIFKEKINFKLAGGGGFAPHQDAPAYVTFKQRMHITAMIAIDGANKENGCLDIVRGEHNKGHFPHTHPGGVLDESYTKRYEAEGRWEPVVTQPGDIMFFHSCAPHRSGPNTTSGPRRAYYITYNPKSDGTFREAYFADKREAFPPDAERIPGKDYSKGGEIYNLANPIPVKS* # ORIGINAL: g4677.t1 original gene structure, not modified by PASA NODE_2911_length_4763_cov_39.1781 AUGUSTUS gene 2431 4669 . - . ID=g4677;Name=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS mRNA 2431 4669 . - . ID=g4677.t1;Parent=g4677;Name=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 4647 4669 . - . ID=g4677.t1.exon1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 4647 4669 . - 0 ID=cds.g4677.t1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 4349 4473 . - . ID=g4677.t1.exon2;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 4349 4473 . - 1 ID=cds.g4677.t1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 3936 4095 . - . ID=g4677.t1.exon3;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 3936 4095 . - 2 ID=cds.g4677.t1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 3459 3612 . - . ID=g4677.t1.exon4;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 3459 3612 . - 1 ID=cds.g4677.t1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 2868 2957 . - . ID=g4677.t1.exon5;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 2868 2957 . - 0 ID=cds.g4677.t1;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 2431 2544 . - . ID=g4677.t1.exon6;Parent=g4677.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 2431 2544 . - 0 ID=cds.g4677.t1;Parent=g4677.t1 #PROT g4677.t1 g4677 MNGRPSTKYVAPFVGRAADTGSRPISALPSATYIAIADAAIDELLRELDTPDKATEWKFHSGDKDVHTYYRREAGSSATRIKIRGIVDASAEKIASTISDMSTRKKWDPLLKSISIVDQLDDATVVQHMAHAGTYYGLRKITRDFCSVMRFRKEHMCVRGEVLPSGWIIDRTDANQCFVTYIVQVDLKGNVATKFMDNLNESTPKFILSLRKLVAPAATST* # ORIGINAL: g4676.t1 original gene structure, not modified by PASA NODE_2911_length_4763_cov_39.1781 AUGUSTUS gene 336 1586 . - . ID=g4676;Name=g4676.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS mRNA 336 1586 . - . ID=g4676.t1;Parent=g4676;Name=g4676.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS exon 336 1586 . - . ID=g4676.t1.exon1;Parent=g4676.t1 NODE_2911_length_4763_cov_39.1781 AUGUSTUS CDS 336 1586 . - 0 ID=cds.g4676.t1;Parent=g4676.t1 #PROT g4676.t1 g4676 MRTEKPLSLSAVPSSDLLQTLSRARPFVRWWSCIIMALLIGAGIAIPFVVYQQTTRDEQHSLQDRLASYADAEAQNVKRVFTHTMRAAQNLRMAVNLLPEGAMTFRQFSDSVALLDRPSATTGFMWSPVVPHAQRSWFEANARAINNDSARFTDYAIVDNGARIATPVFNTSVPLRVVTAPNRTSYLPLLYEWSRFNVSVLNRIGIDLFNTLVLGNVSTTLISGSPAVRTNLVFPSESGPQKGVFIMTPVYRGTIEPTSNAERKASAIGMLSVFSAISSMVNEVRAYKPTIHVQIFQERGLSNLYAEDGVVPATTAANVTEVHGARYESTLEIGDRTFVFVATPTEKLVQDSTTSNPTIFAAITAVGFLLMIVGAGIAIRTIVLTKEKVALSERRRHCVTEMIGALLILLFLLLLT* # ORIGINAL: g12812.t1 original gene structure, not modified by PASA NODE_3466_length_3407_cov_39.0876 AUGUSTUS gene 2 2686 . + . ID=g12812;Name=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS mRNA 2 2686 . + . ID=g12812.t1;Parent=g12812;Name=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS exon 2 1721 . + . ID=g12812.t1.exon1;Parent=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS CDS 2 1721 . + 0 ID=cds.g12812.t1;Parent=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS exon 1976 2050 . + . ID=g12812.t1.exon2;Parent=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS CDS 1976 2050 . + 2 ID=cds.g12812.t1;Parent=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS exon 2565 2686 . + . ID=g12812.t1.exon3;Parent=g12812.t1 NODE_3466_length_3407_cov_39.0876 AUGUSTUS CDS 2565 2686 . + 2 ID=cds.g12812.t1;Parent=g12812.t1 #PROT g12812.t1 g12812 QQQQQQSATQQQQQQQTNSALQSTQQAASTQQPQPTIGRRDANEAPEGVYVGAHHMHRRAANASNTFGGGGMLYLLGSASATLRNCAISGNSAPNGAVACIPGQPSRLVLENCTITLNSATDVLGGPRSTSNGGVVSVSGLRSAPASVAFVACTANGNAALGAGGIVYLGEFASVTVSATTFSDNVASGGGSVVYIAGSSAGIAAANVSFSMCTFGNHSSSDGSMFGLLSGATSLSVCRLQGTSLVTNSGPGGQPPPESNPDNRIFAFSSGTGASLSVRDTIFSGLRVSTGGPIVGLLGSSGNVGDGASLVFTNITLLNTGVFIIAAKGISNATTVVFTDVVVKGTSGYVFAFGSRDVTMTRVSIVGCSGSPIAVNGPATMVVDALTIDSHLYSDANEPTATDSIILVVDGAVQLIKPIFKNVQRRSLAYVDNSGVLVAHSATVVNTTGSGFIIDGAGRMSLYGGDFRLVAGSAVFQFVSGTLDIVGASFTGIDASIVMKERGALTIQFCTFSGIRRALLSAQTGGSAVISHSVCVGGVGSAGEAMVLLTTEAAASGAGIRASTLAISNVTFSGNLGYGSILSLQGASSANVSSSVFTENYQSAKQKSDDISSDWGVISVSSSAALSISNTTIKCECT* # ORIGINAL: g3697.t1 original gene structure, not modified by PASA NODE_708_length_18813_cov_37.6524 AUGUSTUS gene 18484 18813 . + . ID=g3697;Name=g3697.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS mRNA 18484 18813 . + . ID=g3697.t1;Parent=g3697;Name=g3697.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 18484 18813 . + . ID=g3697.t1.exon1;Parent=g3697.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 18484 18813 . + 0 ID=cds.g3697.t1;Parent=g3697.t1 #PROT g3697.t1 g3697 MSITNVSVFSTADASTDGVFNDGVPEGDENRKSSIERALLRAKIGLFGVLFVMSKETVQNPTTVLFDMLVDFLQVLSFPFASVFPWNPAWTDWLSTATRITRFHWYLEIS # ORIGINAL: g3696.t1 original gene structure, not modified by PASA NODE_708_length_18813_cov_37.6524 AUGUSTUS gene 13366 14202 . - . ID=g3696;Name=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS mRNA 13366 14202 . - . ID=g3696.t1;Parent=g3696;Name=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 14090 14202 . - . ID=g3696.t1.exon1;Parent=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 14090 14202 . - 0 ID=cds.g3696.t1;Parent=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 13692 13791 . - . ID=g3696.t1.exon2;Parent=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 13692 13791 . - 1 ID=cds.g3696.t1;Parent=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 13366 13458 . - . ID=g3696.t1.exon3;Parent=g3696.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 13366 13458 . - 0 ID=cds.g3696.t1;Parent=g3696.t1 #PROT g3696.t1 g3696 MAPFCRGQFDCIIAADVLYAGESVPALIETLVAVTSNCAKPCVVYLAYCKRDMDGEAHFWQEAPKHFDFDEITGASLHDVYQHPSVKVFRLRYKHSATATV* # ORIGINAL: g3695.t1 original gene structure, not modified by PASA NODE_708_length_18813_cov_37.6524 AUGUSTUS gene 5394 10638 . + . ID=g3695;Name=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS mRNA 5394 10638 . + . ID=g3695.t1;Parent=g3695;Name=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 5394 5597 . + . ID=g3695.t1.exon1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 5394 5597 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 5835 6698 . + . ID=g3695.t1.exon2;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 5835 6698 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 7045 7258 . + . ID=g3695.t1.exon3;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 7045 7258 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 7455 7519 . + . ID=g3695.t1.exon4;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 7455 7519 . + 2 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 7676 7753 . + . ID=g3695.t1.exon5;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 7676 7753 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 8038 8261 . + . ID=g3695.t1.exon6;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 8038 8261 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 8501 8577 . + . ID=g3695.t1.exon7;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 8501 8577 . + 1 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 8885 9129 . + . ID=g3695.t1.exon8;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 8885 9129 . + 2 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 9273 9472 . + . ID=g3695.t1.exon9;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 9273 9472 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 9822 10032 . + . ID=g3695.t1.exon10;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 9822 10032 . + 1 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 10173 10322 . + . ID=g3695.t1.exon11;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 10173 10322 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 10552 10638 . + . ID=g3695.t1.exon12;Parent=g3695.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 10552 10638 . + 0 ID=cds.g3695.t1;Parent=g3695.t1 #PROT g3695.t1 g3695 MDADGGSRASSGSANGLGTMDPAIGRLSPPSKFEFPRIPYGIQENFMRNMYECIEDGAFGVFESPTGTGKTLSIICSSLAWLRDNEARTTLAESGHVAAASALALAIRNTPSRPHGIYGTETPSPAHAQKHEILSSVHAQGNDVAVTGRSTLVPAHASGVDATDHVSVAASNADFGAYKGRPFAACVSGEVRVTATVKVPPVGSVVSSGGWLEKSHVGGPLDKGHVGGCGSDWISEYARSMEHSRHVREAQERARRWKEAEGRLEDAKQKRKKDSGKGMGFVSKRRKVAVSSEEGAGGDGAGMDDDDLVVAEYYDGAAIGKSAVGGNGFYDDDESDDDASAGRKHTSFNEMEDVKEAWNAAAPKVFYCSRTHSQLSQFVRELRNSPHGKWARCVTLGSRQTSCINPTVRRLGSAARINDRCLDMQRKGGSHKCAYVDKEGLDDFEVAALSAIRDIEDLVSLGNEVSACAYYGSRRAARLAHVIALPYQAMFHAPTRDALGISVVGSVVIVDEAHNLLDAIASAHSVEVTWTVIRRAQAQLQGYLDKYRTRLRGDNTMYIQQLISICAAFLKRLDQGIETAPRMQHQDGRSSSGRAANVTQTPQSQSMHTINDLVISLGIDNINLFRVLQYCRRSEIGKKLNGFVDRLRADRQKDKGMLLSTAALLDPSSESSALPHLEAFLDALNTSESDGRLLVTSRCSDGTNASSMRFLLLNTSVHFQPVLRDARAVILCGGTLQPTSELSERLDVAGKRAVRLFSCGHVIPPGNLRVLVVGTAPSGSELKFTYATREDTGMMASLGQTLLNACRIVPQGIVCFFPSYDFEERAFAAWSSSSLIASIEKVKRVFREPRESSQTDALLKAYSDAAISSDSV* # ORIGINAL: g3694.t1 original gene structure, not modified by PASA NODE_708_length_18813_cov_37.6524 AUGUSTUS gene 71 4823 . - . ID=g3694;Name=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS mRNA 71 4823 . - . ID=g3694.t1;Parent=g3694;Name=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 4741 4823 . - . ID=g3694.t1.exon1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 4741 4823 . - 0 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 4470 4530 . - . ID=g3694.t1.exon2;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 4470 4530 . - 1 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 3522 4209 . - . ID=g3694.t1.exon3;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 3522 4209 . - 0 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 2448 2519 . - . ID=g3694.t1.exon4;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 2448 2519 . - 2 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 1985 2095 . - . ID=g3694.t1.exon5;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 1985 2095 . - 2 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 1719 1804 . - . ID=g3694.t1.exon6;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 1719 1804 . - 2 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 1018 1140 . - . ID=g3694.t1.exon7;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 1018 1140 . - 0 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 554 720 . - . ID=g3694.t1.exon8;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 554 720 . - 0 ID=cds.g3694.t1;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS exon 71 242 . - . ID=g3694.t1.exon9;Parent=g3694.t1 NODE_708_length_18813_cov_37.6524 AUGUSTUS CDS 71 242 . - 1 ID=cds.g3694.t1;Parent=g3694.t1 #PROT g3694.t1 g3694 MARSVVDAAALLRGATVVGRAMCAEYGRTWRIYFAPRPETALAIFRGAQGSASAQGRYLTLDNTLNSNGSTVADSTQIVNSNNNNNINSNSNNNNNNNSSSRYGSDNLVLNSDGSDANLVLAGQSGVHLPQSTVVDVAAAVGAETEITAAHSLHTNVTGSSPAAEFMRVHASNPPASGTSDGMRAYVDDINADSPHSHGAALELPAVNLPTDTALSGQGSEGVSTSMSESLSESSTGSGSVYHASDRQSRASDNAVVCDATQLTNAGTDVTATDDVRGLAAGLSMGALTEMARRSVGMQPGGRLDSPFLTEANAQRLADGLCRMRGAALKLGQMISIQDNSFIPPEFQLIFDRVRASADFMPTKQMEKAVASELGADWRSRLASFDDVPIAAASIGQVHRASLTNGMEVVMKIQYPGVAESIDSDIDNITSLLTFSKLLPPGLYLEKTMQVARKELGWETDYFREARYAKIFKKLLEDEADSFAVPSIVDELTTKRVLTMQYMPGIPLEQTIRLDQVTRDK # PASA_UPDATE: g7676.t1, single gene model update, valid-1, status:[pasa:asmbl_795,status:12], valid-1 NODE_1204_length_13095_cov_42.3032 . gene 6842 11417 . - . ID=g7676;Name=g7676.t1 NODE_1204_length_13095_cov_42.3032 . mRNA 6842 11417 . - . ID=g7676.t1;Parent=g7676;Name=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 11274 11417 . - . ID=g7676.t1.exon1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 11274 11417 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 11057 11118 . - . ID=g7676.t1.exon2;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 11057 11118 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 10863 10953 . - . ID=g7676.t1.exon3;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 10863 10953 . - 1 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 10431 10736 . - . ID=g7676.t1.exon4;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 10431 10736 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 10159 10220 . - . ID=g7676.t1.exon5;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 10159 10220 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 9773 9994 . - . ID=g7676.t1.exon6;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 9773 9994 . - 1 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 9461 9575 . - . ID=g7676.t1.exon7;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 9461 9575 . - 1 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 9100 9196 . - . ID=g7676.t1.exon8;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 9100 9196 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 8767 8942 . - . ID=g7676.t1.exon9;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 8767 8942 . - 2 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 8321 8499 . - . ID=g7676.t1.exon10;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 8321 8499 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 8108 8198 . - . ID=g7676.t1.exon11;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 8108 8198 . - 1 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 7773 7872 . - . ID=g7676.t1.exon12;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 7773 7872 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 7455 7606 . - . ID=g7676.t1.exon13;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 7455 7606 . - 2 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . exon 6842 7332 . - . ID=g7676.t1.exon14;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . CDS 7231 7332 . - 0 ID=cds.g7676.t1;Parent=g7676.t1 NODE_1204_length_13095_cov_42.3032 . three_prime_UTR 6842 7230 . - . ID=g7676.t1.utr3p1;Parent=g7676.t1 #PROT g7676.t1 g7676 MASGAMTTLRERQVDALKTMLNLNTPVKKSLAASEPVWKVLVYDRFGQDIISPLLKVGELRELGITLHLLLHSDRDAIPDVPAVYFVMPTAENIARIGRDCRDQLYDSFYLNFISHIPRSMLEELASAAVEADVASLITKVHDQHLNFVSLEPDLFILRNQERDNISFFALNNPEAKDTDIERSVDDIVDSLFSVLVTLGVVPVIRCPRGNAAEMVAEKLDGRLRDHLKNTRNNLFSDGPSGPLSTLQRPLLAIVDRGMDLSPVMHHAWTYQALLHDILDMRLNRQVVNLLNFASWVVITQAPGADGKSMKPKTFDLDPADSFWQQNKLSPFPQVATEVENALNAYKVQAEEVTRLSNALGGEDGLAAGAERLNSAVMSLPELTERKRVIDMHTTLATALLDQIKSRQLDAFFETEERLMQKSSLERPVTDMIADTTLGTVEDRIRLFAIYMVTADDIPDSVITDCEASLKAQAADLDFLPFLKNLRAFSRMASLPQAGGSGSTGMLSRMANFNKVLETGSEFFKQGVKSLIGKKALPITRIVEGLMDGKGDEYRYLDPKTLRQDSASGRPRATFNEAIVFVVGGGTYVEYQNILDHMKKQQPGKRVTYGSTELLSAYQFVTQLRELGRKSQ* # PASA_UPDATE: g7675.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_793,status:3], valid-1 # PASA_UPDATE: g7675.t1, single gene model update, valid-1, status:[pasa:asmbl_790,status:13],[pasa:asmbl_794,status:12], valid-1 NODE_1204_length_13095_cov_42.3032 . gene 3148 5930 . - . ID=g7675;Name=g7675.t1 NODE_1204_length_13095_cov_42.3032 . mRNA 3149 5930 . - . ID=g7675.t1.1.5b6be70a;Parent=g7675;Name=g7675.t1 NODE_1204_length_13095_cov_42.3032 . five_prime_UTR 5321 5930 . - . ID=g7675.t1.1.5b6be70a.utr5p1;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . exon 4721 5930 . - . ID=g7675.t1.1.5b6be70a.exon1;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . CDS 4721 5320 . - 0 ID=cds.g7675.t1.1.5b6be70a;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . exon 4460 4588 . - . ID=g7675.t1.1.5b6be70a.exon2;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . CDS 4460 4588 . - 0 ID=cds.g7675.t1.1.5b6be70a;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . exon 3149 4358 . - . ID=g7675.t1.1.5b6be70a.exon3;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . CDS 3342 4358 . - 0 ID=cds.g7675.t1.1.5b6be70a;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . three_prime_UTR 3149 3341 . - . ID=g7675.t1.1.5b6be70a.utr3p1;Parent=g7675.t1.1.5b6be70a NODE_1204_length_13095_cov_42.3032 . mRNA 3148 5606 . - . ID=g7675.t1;Parent=g7675;Name=g7675.t1 NODE_1204_length_13095_cov_42.3032 . five_prime_UTR 5515 5606 . - . ID=g7675.t1.utr5p1;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . five_prime_UTR 5321 5385 . - . ID=g7675.t1.utr5p2;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . exon 5515 5606 . - . ID=g7675.t1.exon1;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . exon 4721 5385 . - . ID=g7675.t1.exon2;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . CDS 4721 5320 . - 0 ID=cds.g7675.t1;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . exon 4460 4588 . - . ID=g7675.t1.exon3;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . CDS 4460 4588 . - 0 ID=cds.g7675.t1;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . exon 3148 4358 . - . ID=g7675.t1.exon4;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . CDS 3342 4358 . - 0 ID=cds.g7675.t1;Parent=g7675.t1 NODE_1204_length_13095_cov_42.3032 . three_prime_UTR 3148 3341 . - . ID=g7675.t1.utr3p1;Parent=g7675.t1 #PROT g7675.t1.1.5b6be70a g7675 MEKEAMGPYDRPFYGDASSHAAQSYPGAYVTHTGGSSPYTSGGHPGYSAVASNGTAGYYGTYGYVSAPPADESPYDIARRLWNRLGRDRDAVRSIIERVVTEDSTIAAGGAYRDPREATVWYGSPAGFANPPISGGQGSAAGVAAGVPPIEKANLSPKLRSNESGVPPTVALSVSAAAASDGTVEEVKGALAVEGNRANKRKTESPTNIPNAVEGGVDSDGEPSAKRKRTESSLQELVDAASMVADKPKEKEPLKEPSCESSPSREAQSLSQSQRQQQQQQQQLQLQQQQQQQQQQHQQQQQQHQQQQHAREGPLAHLVAHNRSLQLMPKHMLGPPHMGYPVPYGGPPPPHLPYVYGPPPPQQHHIGMPAFHSGVHPQPTYGMPMQPPGAAKLNVMSHALALSQARGGREPFAQPHDMNNQADFHPEINDADYNPELYKMLTLSATCTVRLVLPNADVPGGMSFFGYVNGYSEAVHIFGAVRNSSCRIVHGRLSEAERNLIRAGQGYVYDESSSGIKRWTDGFDWKDSYWQYNKKAMLYKEAEYGTADGKRVKIEKPNGLRKKVIADPSSTMRLVCYYRGK* #PROT g7675.t1 g7675 MEKEAMGPYDRPFYGDASSHAAQSYPGAYVTHTGGSSPYTSGGHPGYSAVASNGTAGYYGTYGYVSAPPADESPYDIARRLWNRLGRDRDAVRSIIERVVTEDSTIAAGGAYRDPREATVWYGSPAGFANPPISGGQGSAAGVAAGVPPIEKANLSPKLRSNESGVPPTVALSVSAAAASDGTVEEVKGALAVEGNRANKRKTESPTNIPNAVEGGVDSDGEPSAKRKRTESSLQELVDAASMVADKPKEKEPLKEPSCESSPSREAQSLSQSQRQQQQQQQQLQLQQQQQQQQQQHQQQQQQHQQQQHAREGPLAHLVAHNRSLQLMPKHMLGPPHMGYPVPYGGPPPPHLPYVYGPPPPQQHHIGMPAFHSGVHPQPTYGMPMQPPGAAKLNVMSHALALSQARGGREPFAQPHDMNNQADFHPEINDADYNPELYKMLTLSATCTVRLVLPNADVPGGMSFFGYVNGYSEAVHIFGAVRNSSCRIVHGRLSEAERNLIRAGQGYVYDESSSGIKRWTDGFDWKDSYWQYNKKAMLYKEAEYGTADGKRVKIEKPNGLRKKVIADPSSTMRLVCYYRGK* # PASA_UPDATE: g7673.t1, single gene model update, valid-1, status:[pasa:asmbl_789,status:12], valid-1 NODE_1204_length_13095_cov_42.3032 . gene 102 320 . + . ID=g7673;Name=g7673.t1 NODE_1204_length_13095_cov_42.3032 . mRNA 102 320 . + . ID=g7673.t1;Parent=g7673;Name=g7673.t1 NODE_1204_length_13095_cov_42.3032 . five_prime_UTR 102 102 . + . ID=g7673.t1.utr5p1;Parent=g7673.t1 NODE_1204_length_13095_cov_42.3032 . exon 102 320 . + . ID=g7673.t1.exon1;Parent=g7673.t1 NODE_1204_length_13095_cov_42.3032 . CDS 103 320 . + 0 ID=cds.g7673.t1;Parent=g7673.t1;5_prime_partial=true;3_prime_partial=true #PROT g7673.t1 g7673 SCSSPSAVGCTRTTNGSTFRRSSPSTKYSTNWRSIGPRRKSERRRSKTDLCNTCIEFRTTLNECRTNGGKFQ # ORIGINAL: g7677.t1 original gene structure, not modified by PASA NODE_1204_length_13095_cov_42.3032 AUGUSTUS gene 12104 12933 . + . ID=g7677;Name=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS mRNA 12104 12933 . + . ID=g7677.t1;Parent=g7677;Name=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 12104 12119 . + . ID=g7677.t1.exon1;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 12104 12119 . + 0 ID=cds.g7677.t1;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 12219 12412 . + . ID=g7677.t1.exon2;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 12219 12412 . + 2 ID=cds.g7677.t1;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 12588 12705 . + . ID=g7677.t1.exon3;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 12588 12705 . + 0 ID=cds.g7677.t1;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 12806 12933 . + . ID=g7677.t1.exon4;Parent=g7677.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 12806 12933 . + 2 ID=cds.g7677.t1;Parent=g7677.t1 #PROT g7677.t1 g7677 MATISGSANGGTRTPGLSRHGSYHGDLDDSAATDMEDMAETDMGMDSLKSMQRGVTIGKRGAMGEFIPEKGYSQLSSLAYESPSPASYIIVTPPSNPQYSILGKYRSEKCATDMPGPAAYDTRGDPEHDARSFTLSSKGKMIPVDWTGNIR* # ORIGINAL: g7674.t1 original gene structure, not modified by PASA NODE_1204_length_13095_cov_42.3032 AUGUSTUS gene 443 2848 . - . ID=g7674;Name=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS mRNA 443 2848 . - . ID=g7674.t1;Parent=g7674;Name=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 2813 2848 . - . ID=g7674.t1.exon1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 2813 2848 . - 0 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 2473 2702 . - . ID=g7674.t1.exon2;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 2473 2702 . - 0 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 2272 2372 . - . ID=g7674.t1.exon3;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 2272 2372 . - 1 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 2026 2141 . - . ID=g7674.t1.exon4;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 2026 2141 . - 2 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 1584 1870 . - . ID=g7674.t1.exon5;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 1584 1870 . - 0 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 1315 1375 . - . ID=g7674.t1.exon6;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 1315 1375 . - 1 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 816 981 . - . ID=g7674.t1.exon7;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 816 981 . - 0 ID=cds.g7674.t1;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS exon 443 618 . - . ID=g7674.t1.exon8;Parent=g7674.t1 NODE_1204_length_13095_cov_42.3032 AUGUSTUS CDS 443 618 . - 2 ID=cds.g7674.t1;Parent=g7674.t1 #PROT g7674.t1 g7674 MSSRVTGWLNALGATAPVIAAAAYGLYYYTSAVKVPTLVFKDNDTNKSLLSQCPSLLHRYWPTFWCFNGHASTIVSGLLRTTPNLPLRRETVPTGDGGEVCLDWYDLESSSASTKPIVIILHGLTGGSQESYARHLMLECKQRDYTSVVFNNRGCANSELKTARGYCAACTKDLRAVIAHIQTIHPNAPLFAVGISLGSIILVKYLAEEGSNAVLSGAMSVSNAWDLDHATASLESPPSLYLYNRRLCNNLKALIQRNRHVFDGSDEHNLDLDRVLNARTIREFDQSVVVPTFKYESVKAYYDDASSVNHIENVRVPLLCLNAADDPFSPLHGIPVEKFQAHPSAILAITARGGHIAFAEGIAPFHRSYLDRVFGEFAAAAFSLAKAKMD* # PASA_UPDATE: g14342.t1, single gene model update, valid-1, status:[pasa:asmbl_1024,status:3], valid-1 NODE_1269_length_12542_cov_40.0379 . gene 3421 6562 . - . ID=g14342;Name=g14342.t1 NODE_1269_length_12542_cov_40.0379 . mRNA 3421 6562 . - . ID=g14342.t1;Parent=g14342;Name=g14342.t1 NODE_1269_length_12542_cov_40.0379 . five_prime_UTR 6383 6562 . - . ID=g14342.t1.utr5p1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . exon 4614 6562 . - . ID=g14342.t1.exon1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . CDS 4614 6382 . - 0 ID=cds.g14342.t1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . exon 4333 4456 . - . ID=g14342.t1.exon2;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . CDS 4333 4456 . - 1 ID=cds.g14342.t1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . exon 3971 4156 . - . ID=g14342.t1.exon3;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . CDS 3971 4156 . - 0 ID=cds.g14342.t1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . exon 3421 3816 . - . ID=g14342.t1.exon4;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . CDS 3583 3816 . - 0 ID=cds.g14342.t1;Parent=g14342.t1 NODE_1269_length_12542_cov_40.0379 . three_prime_UTR 3421 3582 . - . ID=g14342.t1.utr3p1;Parent=g14342.t1 #PROT g14342.t1 g14342 MSSSDGPSRLPIAFLICADPSRFRVWLDLKCGSPCEHRILCCRDLAGLTPNSSVVSRVAAYADAFVTWFQHILDSQVLWEGAPNARKVTAASLASDYATEVSAAYVHLEKYINRDERSREKQQYRVLKAIEEGLRPLSREGSVFHCDSVDMDNDSIAIMLQLRSPHLSPEFRAFINSPTGPFVDHMQLTQWTQGSIPLWGAEGSMWSVRPSFVTPENIAGLRTAVSALAHCAEWAHGSRTTPCLLLDEHPEFVDASSKIAQESGAFSSILLFSASTATTVSESLSARGISPEESTPYPAIAFVSLEPVKGALVVARLAAAATVLSGVRGIRSCSVFVVVQGRSLETLDRHILLPRIKAAIATAMYEGSRLSGGFPTSVRLVSGDRGSVDPQAPQRAPGAVVMQVTVEWGEAEQLEAKFSAILEGDSMPAPQAPKRKRESFAVGGDSTPVSVAESGASIMDEDGRATKRARTHIPSPHPPQPRAQTIKPENSCIDKADGDDSAHPEHTTPRHSDAAIRAKEASIPFSPRGSVEVPSPAVKKASVTDSRTPLLRRQPVPVDEQGVAQVPFKIGKITFQSMGTIVYDRPGFHNEDYIYPAGFMSRKVYDPNHQTSNMGDEYQNEIVDSNHDKPLFRVKRLRDGMSWDGSTMTAVWTKVVRSLRDDQATGNIKNVSGPTYFGFGQESFPQIRKYIEEMPNADKCERYWKKRKAATADTQTTPAAAAGAGTEAHVATTDVSKETHSEMPVRDDADNAAMDTEVDVGAEAQGESQG* # PASA_UPDATE: g14344.t1, single gene model update, valid-1, status:[pasa:asmbl_1023,status:12],[pasa:asmbl_1026,status:12], valid-1 NODE_1269_length_12542_cov_40.0379 . gene 11417 12430 . + . ID=g14344;Name=g14344.t1 NODE_1269_length_12542_cov_40.0379 . mRNA 11417 12430 . + . ID=g14344.t1;Parent=g14344;Name=g14344.t1 NODE_1269_length_12542_cov_40.0379 . five_prime_UTR 11417 11616 . + . ID=g14344.t1.utr5p1;Parent=g14344.t1 NODE_1269_length_12542_cov_40.0379 . exon 11417 11960 . + . ID=g14344.t1.exon1;Parent=g14344.t1 NODE_1269_length_12542_cov_40.0379 . CDS 11617 11960 . + 0 ID=cds.g14344.t1;Parent=g14344.t1 NODE_1269_length_12542_cov_40.0379 . exon 12223 12430 . + . ID=g14344.t1.exon2;Parent=g14344.t1 NODE_1269_length_12542_cov_40.0379 . CDS 12223 12430 . + 1 ID=cds.g14344.t1;Parent=g14344.t1;3_prime_partial=true #PROT g14344.t1 g14344 MSGRARSPSRSPVRGKANRSRSPVRGKGDRSRSRSRSSRSSRSSRSSRSSSRSSRSSRSRSRSRSSSRSRSRSRGARRGGRSRSRSRSRSPRGGRRGRSGSPARRKRTPSPPRKRVFINRLTLNVTLEHVKEIFGNYGKVVEAEMPRDTMANNPHRGQCFLEYDTPEAALKAIDHMNGGQLDGE # PASA_UPDATE: g14343.t1, single gene model update, valid-1, status:[pasa:asmbl_1025,status:12], valid-1 NODE_1269_length_12542_cov_40.0379 . gene 7561 10992 . - . ID=g14343;Name=g14343.t1 NODE_1269_length_12542_cov_40.0379 . mRNA 7561 10992 . - . ID=g14343.t1;Parent=g14343;Name=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 10618 10992 . - . ID=g14343.t1.exon1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 10618 10992 . - 0 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 9246 10423 . - . ID=g14343.t1.exon2;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 9246 10423 . - 0 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 8853 8906 . - . ID=g14343.t1.exon3;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 8853 8906 . - 1 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 8433 8701 . - . ID=g14343.t1.exon4;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 8433 8701 . - 1 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 8044 8192 . - . ID=g14343.t1.exon5;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 8044 8192 . - 2 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . exon 7561 7816 . - . ID=g14343.t1.exon6;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . CDS 7619 7816 . - 0 ID=cds.g14343.t1;Parent=g14343.t1 NODE_1269_length_12542_cov_40.0379 . three_prime_UTR 7561 7618 . - . ID=g14343.t1.utr3p1;Parent=g14343.t1 #PROT g14343.t1 g14343 MAANGAVDVDMDVEDDPIVHEASAHPTYHANASVLCIRCVWWPLDHVQCAQALFGVLNFIVSDIVAFCYVRTFAIMYYVSQVDVYLAKSLAEHLYLFQYPLRQPQLHYNAAGDVLDARIKPKQHKIEIDLPIDVNSANYDTNRGLEIAANAGTVDDGGQPTTADDEEQKPGTRMFPSGSMDRRVLTSSLVSQRTHYAVGVLRDNELHITPINAIVQLRPSFAYLDSADANKKEAAAAAAAAAARAGQPVAFAGATDDEGTEDEEEAKAVTVTFTRKENERTIAARKRSHAYLQQQSAAEAWHPLRYYPEGSDESNTACERMFSAAALATDDAADALPSAAAGLSLQSARDFLESLNPPPVDSGPSAPASLPSHLVSLDNLHKMPPEEQLRTLMLSAHVAHFRHVLQHAAPQMPPAVALAALERVAIIVRGCWVVRSDIVYPAKTASPVTGVPAALLCRARDYMLHLFHSEGTVGRKEFAAAVKLPVEDVKAMLAAVGRLRAGKGWELKLDPDDEFARQYPDVFNKQLQMWEQRRTTILQGLKTKKEGEAAAAAAAAAAAAAPSAGQGDVKPKVALEGASGEGAVPFSIAGATLDDQLLGFVTEMLKHYGVCNLALFKRQLQQQQSAGGATNLLAKGVPDAKLLLAIRTIATEIVPEDSRPSVFVMSTSGTPSLDKNRNAVIELMRARANVKKADITAACKVASGGEELSSHAYNRIMKELAVARGGLWHFKTGDGSSASA* # ORIGINAL: g14341.t1 original gene structure, not modified by PASA NODE_1269_length_12542_cov_40.0379 AUGUSTUS gene 186 2345 . + . ID=g14341;Name=g14341.t1 NODE_1269_length_12542_cov_40.0379 AUGUSTUS mRNA 186 2345 . + . ID=g14341.t1;Parent=g14341;Name=g14341.t1 NODE_1269_length_12542_cov_40.0379 AUGUSTUS exon 186 2345 . + . ID=g14341.t1.exon1;Parent=g14341.t1 NODE_1269_length_12542_cov_40.0379 AUGUSTUS CDS 186 2345 . + 0 ID=cds.g14341.t1;Parent=g14341.t1 #PROT g14341.t1 g14341 TASFEGNIEAIELSVAATGLDQQPRSGHNRFAYLYYVVFIAVGAFFMLNLFVGVVVDNFNRLKGKYEGHTLLSDTQKKWLSATRKLLSRKPNRRVARPNSKLRGFCFDVGTSRSADGLVVCVIVLNMLVLAMQHYDQPAAFDDVLQITNWVCVGVFVIEATVKIIGFGRRYFESGWNVFDFLVTLVSVVAVGIELSLRGVSFNPTVIRVLRVLRIGRTVRLVKGAKRIKRLLVTLLFSLPSLVNVGALLVLSMFIYSIVGMSLFSNIRHGYGIDDTINFETFGSSMSIMYRLITASGWNDVLTALSLQPPFCDPHADDLENGDCGDPVAAAVFLSTYVLLCGMFVVNLYVAIIIDNFENANESEDLVREEDLDMFVEVWEALDPDATQMLPLPTILMLVGLLGPPLGIAKPNIYEIEEMDLPLHDGNQVHFLDVLMALISRQLGVLSLPPAIQRVILRRFHSSFPKHKELGEAAMSSLEMRMLTNAAVIIQRAYRRFRRNLRVDSKRTHLNSSDRNQPGAFLAPLMEGDRVDSDAKLAEERLSNISIASSAAVKSTSTASVTVTAAVTIQPECGESENVAEVTVVVSDDEPEAVLRDSADAPDSHVTRSGGGDSHVVDNMEERISTEEVDTSASHVHVVEDVASRSPLLERSASLNDGAPNVEFSGRDTAAGAWDHGDENAAQHSDHNTVTGDDSGDCEPVDDVSVVVDDDQSAESHES* # PASA_UPDATE: g7979.t1, single gene model update, valid-1, status:[pasa:asmbl_5978,status:3], valid-1 NODE_338_length_26505_cov_40.5234 . gene 21519 25099 . + . ID=g7979;Name=g7979.t1 NODE_338_length_26505_cov_40.5234 . mRNA 21519 25099 . + . ID=g7979.t1;Parent=g7979;Name=g7979.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 21519 21681 . + . ID=g7979.t1.utr5p1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 21519 21804 . + . ID=g7979.t1.exon1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 21682 21804 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 21945 22050 . + . ID=g7979.t1.exon2;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 21945 22050 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 22277 22368 . + . ID=g7979.t1.exon3;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 22277 22368 . + 2 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 22572 22696 . + . ID=g7979.t1.exon4;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 22572 22696 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 22946 23075 . + . ID=g7979.t1.exon5;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 22946 23075 . + 1 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 23362 23436 . + . ID=g7979.t1.exon6;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 23362 23436 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 23830 24024 . + . ID=g7979.t1.exon7;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 23830 24024 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . exon 24185 25099 . + . ID=g7979.t1.exon8;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . CDS 24185 24916 . + 0 ID=cds.g7979.t1;Parent=g7979.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 24917 25099 . + . ID=g7979.t1.utr3p1;Parent=g7979.t1 #PROT g7979.t1 g7979 MLRMRSLIGAAESLLRPALASYSTSVNVHPSSNAETAPKLQDRDLFRNKAYIDGKWVDADSGASFPVYNPANGAHIGHVPEMGATETRRAIEAAEKAFHKWSKTTAKDRSIILRKWFDLLMRHQEDLALLMTVEQGKPMKESRGEIAYGASYIEYYAEEAKRIRGDIVPHGSHGRRLLVLKQPVGVTAMITPWNFPSAMIARKVAAAFAAGCTAVIKPAEDTPYSALALCELAHRAGIPDGVINVVTCSRPRADEVGTELATHPTVRKLSFTGSTAVGKHLMSLCSSTVKKVSLELGGNAPFIVFDDADLDKAVEGAVASKFRNSGQTCVCANRMFVQSKIHDEFVRKFSDAVRAIRVGDGTVDGIGQGPMINSRAVEKTEQFVGDAVQKGAKVVVGGRRHALGGNFFEPTVLTNVHENMLVCSSEIFGPLAPVHRFETEEEAIRMANNTRAGLMGYVYTRDLGRAWRMAEALEFGMIGLNEGIISSEAVPFGGWKESGLGREGSQYGLDDYLEYKYVCMAGIGA* # PASA_UPDATE: g7975.t1, single gene model update, valid-1, status:[pasa:asmbl_5980,status:12], valid-1 NODE_338_length_26505_cov_40.5234 . gene 8020 11808 . + . ID=g7975;Name=g7975.t1 NODE_338_length_26505_cov_40.5234 . mRNA 8020 11808 . + . ID=g7975.t1;Parent=g7975;Name=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 8020 8131 . + . ID=g7975.t1.exon1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 8020 8131 . + 0 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 8222 8288 . + . ID=g7975.t1.exon2;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 8222 8288 . + 2 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 8383 8518 . + . ID=g7975.t1.exon3;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 8383 8518 . + 1 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 8686 8791 . + . ID=g7975.t1.exon4;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 8686 8791 . + 0 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 8964 9105 . + . ID=g7975.t1.exon5;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 8964 9105 . + 2 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 9451 9555 . + . ID=g7975.t1.exon6;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 9451 9555 . + 1 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 9996 10126 . + . ID=g7975.t1.exon7;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 9996 10126 . + 1 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . exon 10398 11808 . + . ID=g7975.t1.exon8;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . CDS 10398 11746 . + 2 ID=cds.g7975.t1;Parent=g7975.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 11747 11808 . + . ID=g7975.t1.utr3p1;Parent=g7975.t1 #PROT g7975.t1 g7975 MSNAPYGSQSPSVQRRDGIERISPITSSPAVARITALRKARDPVTCPNGHLFCLNCLGKWVGIREHCPTCRVPINDSNPVRPIHGADNAPRDVPSMDTDVVLTRQDLRRTRIDMIVAEYEADIGSLLGQIAELKGLMATKTAVHVDADPQSLRMEQSAVCPAVVAIPPSDSARDINAALAEKDTVIERLTLQVSEYESRMQSMHREAEAVRCELSSTRFEMSRLKEEQQRLTGGHKNIITAQAKIKSMQMDLDRLNKALVKSDAYIGNLLDKIRTLESGEKAPAAPESTRPSRDSESGDQLHTALTISADSPQPSPNPHHSTLASATESPSPHVTVVGRLHSSEQPANTNNDNKSPRRTPQVSQKGAVSTATVTARPDRKTATPGKHRQRHMASSVKESALGHVADHEAVRAATPNTLQQHAQNTASFQHSAKQEDSLDAAHADIMQQREPQQQQQPQQQQQQQQEQKGQSPTAAIAAPPIDVAADASPGQGRLPVSAVRRTLVYNNDGRFHASNEIGAVLARDFASMHYEHPPISHPFVHMQHRHHPYAPDAGHVNEALPPLSHYWPMFGDAHRANAESYAPQAHTYFARHTGYDARQNGVQHGQLSIDNMHRPLATPTSNWPVFGFQRWESHPGGHAGMGAHTEERHASAPPSCETGFGAMDQNANSDTNISPLRKHALDASHHLASDSSSKRQRTSPDDVLLIDSLAHEQPL* # PASA_UPDATE: g7972.t1, single gene model update, valid-1, status:[pasa:asmbl_5973,status:12], valid-1 NODE_338_length_26505_cov_40.5234 . gene 109 1862 . + . ID=g7972;Name=g7972.t1 NODE_338_length_26505_cov_40.5234 . mRNA 109 1862 . + . ID=g7972.t1;Parent=g7972;Name=g7972.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 109 110 . + . ID=g7972.t1.utr5p1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . exon 109 241 . + . ID=g7972.t1.exon1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . CDS 111 241 . + 0 ID=cds.g7972.t1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . exon 539 698 . + . ID=g7972.t1.exon2;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . CDS 539 698 . + 1 ID=cds.g7972.t1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . exon 934 1060 . + . ID=g7972.t1.exon3;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . CDS 934 1060 . + 0 ID=cds.g7972.t1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . exon 1386 1862 . + . ID=g7972.t1.exon4;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . CDS 1386 1468 . + 2 ID=cds.g7972.t1;Parent=g7972.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 1469 1862 . + . ID=g7972.t1.utr3p1;Parent=g7972.t1 #PROT g7972.t1 g7972 MTTLCDAVIRLGGEKAEGIFRVPGDMDAVAALKLQIEKGDYEIKSDEPHVPGSLLKLWLRELEEPLIPADLYPKCIHKQGGETDLTVLDDLPGINREVIEYMVKFLRRIGQPENHAITKMTYDNLAMVFAPSFLRCPSEDPQTIFENTRYEQDFAKAMLDRLKCAE* # PASA_UPDATE: g7974.t1, single gene model update, valid-1, status:[pasa:asmbl_5974,status:3], valid-1 # PASA_UPDATE: g7974.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5975,status:12],[pasa:asmbl_5979,status:12], valid-1 NODE_338_length_26505_cov_40.5234 . gene 5100 7487 . + . ID=g7974;Name=g7974.t1 NODE_338_length_26505_cov_40.5234 . mRNA 5100 7487 . + . ID=g7974.t1;Parent=g7974;Name=g7974.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 5100 5197 . + . ID=g7974.t1.utr5p1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 5450 5465 . + . ID=g7974.t1.utr5p2;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 5100 5197 . + . ID=g7974.t1.exon1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 5450 5531 . + . ID=g7974.t1.exon2;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 5466 5531 . + 0 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 5663 5780 . + . ID=g7974.t1.exon3;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 5663 5780 . + 0 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 5904 5974 . + . ID=g7974.t1.exon4;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 5904 5974 . + 2 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 6201 6355 . + . ID=g7974.t1.exon5;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 6201 6355 . + 0 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 6755 7029 . + . ID=g7974.t1.exon6;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 6755 7029 . + 1 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . exon 7307 7487 . + . ID=g7974.t1.exon7;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . CDS 7307 7452 . + 2 ID=cds.g7974.t1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 7453 7487 . + . ID=g7974.t1.utr3p1;Parent=g7974.t1 NODE_338_length_26505_cov_40.5234 . mRNA 5233 7486 . + . ID=g7974.t1.1.5b6be70b;Parent=g7974;Name=g7974.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 5233 5465 . + . ID=g7974.t1.1.5b6be70b.utr5p1;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 5233 5531 . + . ID=g7974.t1.1.5b6be70b.exon1;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 5466 5531 . + 0 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 5663 5780 . + . ID=g7974.t1.1.5b6be70b.exon2;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 5663 5780 . + 0 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 5904 5974 . + . ID=g7974.t1.1.5b6be70b.exon3;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 5904 5974 . + 2 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 6201 6355 . + . ID=g7974.t1.1.5b6be70b.exon4;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 6201 6355 . + 0 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 6755 7029 . + . ID=g7974.t1.1.5b6be70b.exon5;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 6755 7029 . + 1 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . exon 7307 7486 . + . ID=g7974.t1.1.5b6be70b.exon6;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . CDS 7307 7452 . + 2 ID=cds.g7974.t1.1.5b6be70b;Parent=g7974.t1.1.5b6be70b NODE_338_length_26505_cov_40.5234 . three_prime_UTR 7453 7486 . + . ID=g7974.t1.1.5b6be70b.utr3p1;Parent=g7974.t1.1.5b6be70b #PROT g7974.t1 g7974 MADQTVLSDEFINVFVGNLPFKVTEDDLVTLFKQNTQNVAGAKIIRRGPRSLGYGFVQFTEDNSAKDAVTKWNKKDYEGRELNVEIAKPREEGAPRERAEGSNARGRGRGRGRGISGAPRGGAVYAEGSAPAPRGGRAPRGGAAAAGAPAGAAPAARGGARGGRGARAPRPPREEGSAPAQTKISSATALFVANLPFTVDDERLKSEVFEGFNVKTAHVVLKRNNRSKGFGFVEFETAEEQHRALAAVDKKSVEGRELAVKIALQGDKVEGEAAQQ* #PROT g7974.t1.1.5b6be70b g7974 MADQTVLSDEFINVFVGNLPFKVTEDDLVTLFKQNTQNVAGAKIIRRGPRSLGYGFVQFTEDNSAKDAVTKWNKKDYEGRELNVEIAKPREEGAPRERAEGSNARGRGRGRGRGISGAPRGGAVYAEGSAPAPRGGRAPRGGAAAAGAPAGAAPAARGGARGGRGARAPRPPREEGSAPAQTKISSATALFVANLPFTVDDERLKSEVFEGFNVKTAHVVLKRNNRSKGFGFVEFETAEEQHRALAAVDKKSVEGRELAVKIALQGDKVEGEAAQQ* # PASA_UPDATE: g7978.t1, single gene model update, valid-1, status:[pasa:asmbl_5977,status:3], valid-1 NODE_338_length_26505_cov_40.5234 . gene 18807 21185 . + . ID=g7978;Name=g7978.t1 NODE_338_length_26505_cov_40.5234 . mRNA 18807 21185 . + . ID=g7978.t1;Parent=g7978;Name=g7978.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 18807 18862 . + . ID=g7978.t1.utr5p1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 18807 18932 . + . ID=g7978.t1.exon1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 18863 18932 . + 0 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 19059 19082 . + . ID=g7978.t1.exon2;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 19059 19082 . + 2 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 19245 19327 . + . ID=g7978.t1.exon3;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 19245 19327 . + 2 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 19510 19617 . + . ID=g7978.t1.exon4;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 19510 19617 . + 0 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 19760 20260 . + . ID=g7978.t1.exon5;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 19760 20260 . + 0 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . exon 20441 21185 . + . ID=g7978.t1.exon6;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . CDS 20441 20791 . + 0 ID=cds.g7978.t1;Parent=g7978.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 20792 21185 . + . ID=g7978.t1.utr3p1;Parent=g7978.t1 #PROT g7978.t1 g7978 MASFKLFVAFAAFALLFAFAAAQQETATTATDAAVENPIVAHERTLAELEARKVLLLQESAAASTAETAAPEDPKRATKLARLDEKILRAKYKIDAAKFYQGLQDALASRPDLAEPAKAPAGTPKLVLTAEERAASKIESLRRRIAREKFVLDYLTANPEPVEPAKTPKAPKAVPAEADTPAPDAPVDAKAQKKAAKRAAVAQDASTPAVDAAAAPDVAAIPATPAVPRSERKLSKLKAKIAAAASVGSVDASDAQGGAPVAVGKKYADIATLERRLKFEEAWLAHAGKASIDAVDEAVAALGPQSSAERAQARLVRLEQKLARKEFESAWISENGPIETPPAAADAPAAAADAAPADAAAAHEAVVADAPASQEVHA* # PASA_UPDATE: g7973.t1, single gene model update, valid-1, status:[pasa:asmbl_5970,status:12], valid-1 NODE_338_length_26505_cov_40.5234 . gene 2159 4438 . - . ID=g7973;Name=g7973.t1 NODE_338_length_26505_cov_40.5234 . mRNA 2159 4438 . - . ID=g7973.t1;Parent=g7973;Name=g7973.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 4377 4438 . - . ID=g7973.t1.utr5p1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 4272 4438 . - . ID=g7973.t1.exon1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 4272 4376 . - 0 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 4000 4096 . - . ID=g7973.t1.exon2;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 4000 4096 . - 0 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 3623 3822 . - . ID=g7973.t1.exon3;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 3623 3822 . - 2 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 3313 3424 . - . ID=g7973.t1.exon4;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 3313 3424 . - 0 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 2920 3045 . - . ID=g7973.t1.exon5;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 2920 3045 . - 2 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . exon 2159 2452 . - . ID=g7973.t1.exon6;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . CDS 2361 2452 . - 2 ID=cds.g7973.t1;Parent=g7973.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 2159 2360 . - . ID=g7973.t1.utr3p1;Parent=g7973.t1 #PROT g7973.t1 g7973 MAVANLFKLSVSFLAVTFPVVLLGIVIEWFAKIEGGVSLSSIDCSKGCVRNLHPILMVAGFAVASSWAIVSYRVLPLSRSIQKAVHLFLQTAAFILAVIGVYAIWRHHEKNDIPHLYSLHSWMGLLVMILFGLQLVVGFGTYFFPRAPENTRKAYSPYHIFFGIFIYFLALATITVGIDEYAFFKDDYGTRPYWARLANALGLCTWITGAAVAGAVVIGRGRDVIEAASGSYGEQSSLLKPQA* # PASA_UPDATE: g7976.t1, single gene model update, valid-1, status:[pasa:asmbl_5976,status:3], valid-1 NODE_338_length_26505_cov_40.5234 . gene 12348 16857 . + . ID=g7976;Name=g7976.t1 NODE_338_length_26505_cov_40.5234 . mRNA 12348 16857 . + . ID=g7976.t1;Parent=g7976;Name=g7976.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 12348 12461 . + . ID=g7976.t1.utr5p1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 12348 12569 . + . ID=g7976.t1.exon1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 12462 12569 . + 0 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 12835 12916 . + . ID=g7976.t1.exon2;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 12835 12916 . + 0 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 13087 13334 . + . ID=g7976.t1.exon3;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 13087 13334 . + 2 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 13470 14489 . + . ID=g7976.t1.exon4;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 13470 14489 . + 0 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 14625 14714 . + . ID=g7976.t1.exon5;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 14625 14714 . + 0 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 14855 14946 . + . ID=g7976.t1.exon6;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 14855 14946 . + 0 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . exon 15129 16857 . + . ID=g7976.t1.exon7;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . CDS 15129 16698 . + 1 ID=cds.g7976.t1;Parent=g7976.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 16699 16857 . + . ID=g7976.t1.utr3p1;Parent=g7976.t1 #PROT g7976.t1 g7976 MASRTPYIHFKVQYGDDIRRFAICSSSVDWNALVCKLRDTFKVNHFTIRYRDEDGDFVTLSNSDDLVCAIASSGVPVRLVLEAISAPTATEAVSPTASPSTSTEIPSATQRTPQAQAHHVAAAQSVDVVALAAQLSESLISHGIPKVAGVVTEAVNTALRSVADAIEGHHAGLLASLAEAQATQLAALERSIGSTGGPTQPQQQSQHATADGVGSDANSRVLHDNVRCDGCQQDIYGIRYKCGNCPDFDLCERCEGAFAALGSHDATHVFLKIRVPVPRTHLFFGRFHNRSLLGGNLYEAGPSVRRGGCTRPVTTTFYTTAQPVAPCTTLPTTTATAANGAAAPAEDCRAGQQAQFGWPRRPTRAHNYAHPHFHGDADKHKGHGCHGLHAHGGKHRRDRTGKDACASTEDVTTIEQKADVAASVFTSALDTAAATATATTTTTSSAPAVAIPVRIANPRLSLHSKFVRDVNFPDGSELPVGSEFVKTWTMTNVGSVAWPADVALEYVSGTLVPCMKAFPIGAVVEPGESYDISATLSTPRVEGRHLGIFQLSLNSRPFGHRVWCDICVVAKPPNAVSEERPAASVVPLFDLTPATYTPALLPTVVEHAAVTSAPSTPAVVVNAQSFSVDHSLVEVVSGSPAEQTEQMEQTAIQRSAGDSQQEEQEDATVRSTATGSVDGEWVSRGTSASSASSVSRSVSTAISDFDHLDFEVDFVVLDDATEGADLYSDAAAPPASAASASNATIASERIVEPKCSDCPPTTVYECSPAEEIEMQPFVRHNHNGDVDNESDSGSSDSDSDCEGHSEDDGNGDENSLRGALSSSELERVRQVEANLLLAYKLIALGRDSEILPSPVHAPFDTEMTAEQGSSVSVEIDAPATSDPIMQPCLRFTPEAMPSARIVPVSQPPPMPNYPVAPDVSYRPSIQPEPQPQPQPQPVAGGYPTYSNPESYCPRPLTRPNPYTMGAPRYEVVTPHSMPVLPSNSPTGIAFGYSSAHNNAVVQQQQETHTANRITNNGNSEADLQRALLDMGFFDRELNSRLIRKHRGDMSSVVGELLDHYNNDWWTGRH* # PASA_UPDATE: g7977.t1, single gene model update, valid-1, status:[pasa:asmbl_5971,status:3], valid-1 NODE_338_length_26505_cov_40.5234 . gene 17431 18343 . - . ID=g7977;Name=g7977.t1 NODE_338_length_26505_cov_40.5234 . mRNA 17431 18343 . - . ID=g7977.t1;Parent=g7977;Name=g7977.t1 NODE_338_length_26505_cov_40.5234 . five_prime_UTR 18258 18343 . - . ID=g7977.t1.utr5p1;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . exon 18135 18343 . - . ID=g7977.t1.exon1;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . CDS 18135 18257 . - 0 ID=cds.g7977.t1;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . exon 17916 18014 . - . ID=g7977.t1.exon2;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . CDS 17916 18014 . - 0 ID=cds.g7977.t1;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . exon 17431 17818 . - . ID=g7977.t1.exon3;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . CDS 17450 17818 . - 0 ID=cds.g7977.t1;Parent=g7977.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 17431 17449 . - . ID=g7977.t1.utr3p1;Parent=g7977.t1 #PROT g7977.t1 g7977 MPQVQDVNKWQWTTVASDALVAYTAYYCTDKLFQRNRIWAAIACAIICLAASVGTLRFGPFPKLKKFHLLLAAAGGSISLPLIGYSVQRWYKIYMWTDSTLCIAIFGGFFARTVLPLPVEARILYDVVASALGLTTIYVADPPGGGIGVLVLVVSVLIAVLPSGLRVKSKTAHILATDVFHVGLAAALRLFMQGLM* # PASA_UPDATE: g7980.t1, single gene model update, valid-1, status:[pasa:asmbl_5972,status:12], valid-1 NODE_338_length_26505_cov_40.5234 . gene 25413 26318 . - . ID=g7980;Name=g7980.t1 NODE_338_length_26505_cov_40.5234 . mRNA 25413 26318 . - . ID=g7980.t1;Parent=g7980;Name=g7980.t1 NODE_338_length_26505_cov_40.5234 . exon 25922 26318 . - . ID=g7980.t1.exon1;Parent=g7980.t1 NODE_338_length_26505_cov_40.5234 . CDS 25922 26318 . - 0 ID=cds.g7980.t1;Parent=g7980.t1 NODE_338_length_26505_cov_40.5234 . exon 25413 25729 . - . ID=g7980.t1.exon2;Parent=g7980.t1 NODE_338_length_26505_cov_40.5234 . CDS 25647 25729 . - 2 ID=cds.g7980.t1;Parent=g7980.t1 NODE_338_length_26505_cov_40.5234 . three_prime_UTR 25413 25646 . - . ID=g7980.t1.utr3p1;Parent=g7980.t1 #PROT g7980.t1 g7980 MSLTRRTNNSTTPQHRNTATPHQQPPTATATANAKQVVYERAAEAIYAAIPTPKEQLSNGMIMSVNLGSGLIAGIAAAIISQPADTLLSKINKQKGGSGSIVSRLFGLAKELGFGGLYLGLGARIVMVGALTAGQFAIYGDIKRVLGATGGTEIKKAVH* # ORIGINAL: g11247.t1 original gene structure, not modified by PASA NODE_665_length_19312_cov_48.0731 AUGUSTUS gene 13503 18485 . + . ID=g11247;Name=g11247.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS mRNA 13503 18485 . + . ID=g11247.t1;Parent=g11247;Name=g11247.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 13503 13609 . + . ID=g11247.t1.exon1;Parent=g11247.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 13503 13609 . + 0 ID=cds.g11247.t1;Parent=g11247.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 13796 18485 . + . ID=g11247.t1.exon2;Parent=g11247.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 13796 18485 . + 1 ID=cds.g11247.t1;Parent=g11247.t1 #PROT g11247.t1 g11247 MCSHEDLRKQLRMVRCTASVSEPIVEVGFFDNALSRSKRPAIEAFLRDLSASAHSTNIDTTVDIAMDTADIQGRQHTQQTQQAQLQQQQHTQQTQLQQQQHTQQTQPAPQAAIPSPQMELSSPPLAPGVQDAGTKAIKADSPSVRLTSTALPKCPAIGGCLPTAIAESLYALLSGDSGLRSRWDRWMIFQGTRVQCFRVYDEDVPVIMQHGSLAANPKNTLNNHLHRALRFKKAADCVDPRFTEWYDPRGDFISPGTPPTPEEIATKMQTGIRIAPPVSAMWYAPVTNEEMRDGGSPSVERLLLSSEFSTMDALPKMKGGSLNASSDGSYLSPGARTELVSCKPDAGIMRPSLSGYAFEERQASSLPHGADSTGCGSPLRNWGLSRGPSRDSPGTTPSRHSAFLRPYSSMTTPVHPSAAESTVTSTLRVRHVPIMTADAALRSIGMLVAGSLSVRRSASGHPIGAGTPHDTPGGSQLSAHADQSLNLNSEDFACVARLFHRAKGERVKVSEFAELHSVKKLTQDMDIVIAALRHCCYYVLVSRDGAFVRRRRAHSSNWRAVAESNKINSSSNNNNNNDNISNSRRSEASQFLQNVLLKTDGSIQGENASSVPSGTLTEANVASDEDEQVNDSVAVAGAVAGTTSNAPRHPATATAYNTDEKTAFLRKSEPNVISRAVHFAGFAVDTYGLAAPALPPPHVILGTPAPTTAAPLSDRHYDIFAKPLLYDCSVYKVELSEATGGVVHEEDASPGHNAIAHGNVRRQPRRCFNCDSVSHDVFDCPEETDSVRVQSARMDFQGGGGFGEQSSSGATGARRYHVPPEYAHMTPGRISSELAAALGIEKGDVPPYVLRMNEFGYPPGYRAERARQLEDEGDSREEEPIAIFGDGGHVIEKKEGSNLSLLKRVDRTDGDGKVRGDNGWESVELYKYPGFNGSARKGHGQSATYGTPAHVTQWRGSALPHWVTPGPAPVQQAYGLPYTPSPNNGSPYSYHAGTYSATASPQLAMYGHLGSMTSTGFQYGMAYGAYPSSHSPAAAMYNTDSISPGHATYYPPPPQNAATAWAQGQRTWILSPPSLPPPLPPLPPLSRLPTFQPPPPSYPPLPADLMPTTTTTTATATAHEEKSTRKRKADSPPSSLHGDAVSKRARLSKPPHDSQLTNSGDKEHADSTASLNERCSSVDSVSLPAHHSNPNAAPLPRDINNDEMDIDDTESQTGGIISVIPASDSVIAATSLNVGSGVKGYSSAGNVFERPDHVREAVDSSVITRDDELVRTHSHPLSKTSLLPAPRFAPPVPPISAPAPVASKVAAAASIPSRSSRAHSPKALRRTPLMRPMMGENTLASSLSRLKEFLRIHAGENMRETATPVNSGDVPLKNVSASVDVAAMETDVHAAEDEAGQSIASTCPPSSTGCDEACDTNQSSATATGTESSGVDIGAPIMVTAANGVPNGDIVGTGTVGAMDVGCDDRAIDSRLHSGVLIASDIRGGDDDARTLARTNNVTGNSNATETAFSGRGYRDLSQLDPMGDNVAGAGAQHASPHPTNDPAPAPAPGASIRRDGDEGVRVRWSDASDGIAVASERVGRWQDIRGLIRARKGGHAD* # ORIGINAL: g11245.t1 original gene structure, not modified by PASA NODE_665_length_19312_cov_48.0731 AUGUSTUS gene 6505 8437 . - . ID=g11245;Name=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS mRNA 6505 8437 . - . ID=g11245.t1;Parent=g11245;Name=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 8312 8437 . - . ID=g11245.t1.exon1;Parent=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 8312 8437 . - 0 ID=cds.g11245.t1;Parent=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 7999 8113 . - . ID=g11245.t1.exon2;Parent=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 7999 8113 . - 0 ID=cds.g11245.t1;Parent=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 6505 7544 . - . ID=g11245.t1.exon3;Parent=g11245.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 6505 7544 . - 2 ID=cds.g11245.t1;Parent=g11245.t1 #PROT g11245.t1 g11245 MASDNISLGLLLSYTAIVSFVSCAVNSLTSFGKAILYHIFFELLHMIAPSYNYDITEVVSLILVSDVVTTFPLFWITRKEVNWKLFAVIMPTDVGVGVLGTYLLVTAPPQALKTALGVVFIIFSVWRIGLEVCNTDAGRQLRDRVTEIDKRAADASRMGLGSSGGRPGVCVSALARVGKVVFMAFPKEAAHKTAVTDMTRPLLAGAFVAGCGAGLLRGLFGVGGPPLMVFVALSNIDKGTMRGTMTAEHSVALIGTAVYLLYFRKRYHPARWPQYLVMIVAGLVGVWFGNWLHRRSHHSTVMRTIIMLLITASVTMLSLPFPVTISILSVVLIGGTVSIYFGEVRARREDGGVVCSLPVGMRNPESAVDGSIALTDIPTRKGSDSEDSDGEGRVSQNRHAGRYAPIAHAEEDTIHADTVSLLRSDD* # ORIGINAL: g11244.t1 original gene structure, not modified by PASA NODE_665_length_19312_cov_48.0731 AUGUSTUS gene 986 5450 . - . ID=g11244;Name=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS mRNA 986 5450 . - . ID=g11244.t1;Parent=g11244;Name=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 5345 5450 . - . ID=g11244.t1.exon1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 5345 5450 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 4664 4977 . - . ID=g11244.t1.exon2;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 4664 4977 . - 2 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 3636 4375 . - . ID=g11244.t1.exon3;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 3636 4375 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 3174 3390 . - . ID=g11244.t1.exon4;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 3174 3390 . - 1 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 2615 2818 . - . ID=g11244.t1.exon5;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 2615 2818 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 2220 2327 . - . ID=g11244.t1.exon6;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 2220 2327 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 1769 1894 . - . ID=g11244.t1.exon7;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 1769 1894 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 1323 1482 . - . ID=g11244.t1.exon8;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 1323 1482 . - 0 ID=cds.g11244.t1;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 986 1128 . - . ID=g11244.t1.exon9;Parent=g11244.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 986 1128 . - 2 ID=cds.g11244.t1;Parent=g11244.t1 #PROT g11244.t1 g11244 MASKGLLARIGLGRFTVDSQENVIKLLVLSLVCIVAFALRLFAVIRFESVIHEFDPYFNYRSTKYLVDEGFYQFHNWFDERAWYPLGRIVGGTIYPGLMVTAGIIYHIMRFLNITIAIRNVCVFLAPLFSSFTAIATYFLTKELKDTGAGLMAAALISIVPGYISRSVAGSYDNEGIAIFCLILTYALWIKAVKTGSLLYSGFCALAYFYMVSAWGGYVFIINLIPLHVLTLLITGRFSHRVYVAYSTLYVLGTVLSMQILFVGFQPMQSSEHMAALGVFGLIQIVAFVNYVRAQLPTEHFNAILRVVVMAAVGALALVLGILTITGKVAPWTGRFYSLLDPTYAKDNIPIIASVSEHQPTTWSSFFFDLQYLCVLFPVGLYFCFDKLTDANIFIILYGVTSFYFAGVMVRLMLVLAPVACILGAIALSSTLQTYMRNLSTSAASRREGKKQSSNYPVKNEISLIVIGGITLMLITYVYHCTWVTAEAYSSPSIVLSARGYGDDRIIFDDFREAYYWLRHNTGENDKIMSWWDYGYQITAMANRTILVDNNTWNNTHIATVGKAMASSEENAYKIMRMLDVNYVLVIFGGLTGYSSDDINKFLWMVRIAGSVDPNVKETDYFSPSGEYRIDKEASKTMLNSLMYKMCYYRFGQVYTEHGKPGGYDRVRNAEIGSKDFELDVLEEAYTTEHWLVRIYKVKDLPNRG* # ORIGINAL: g11246.t1 original gene structure, not modified by PASA NODE_665_length_19312_cov_48.0731 AUGUSTUS gene 9598 12235 . - . ID=g11246;Name=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS mRNA 9598 12235 . - . ID=g11246.t1;Parent=g11246;Name=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 11978 12235 . - . ID=g11246.t1.exon1;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 11978 12235 . - 0 ID=cds.g11246.t1;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 11754 11849 . - . ID=g11246.t1.exon2;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 11754 11849 . - 0 ID=cds.g11246.t1;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 11325 11498 . - . ID=g11246.t1.exon3;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 11325 11498 . - 0 ID=cds.g11246.t1;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 9598 10992 . - . ID=g11246.t1.exon4;Parent=g11246.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 9598 10992 . - 0 ID=cds.g11246.t1;Parent=g11246.t1 #PROT g11246.t1 g11246 MQGKDGQNVTREGDGVDAAIMEGTLSDAGGGIASREGVAGKKDATGGDNNGYCVICKRNHFEGQKHIFKKYHLDALKRILDRFGEKIKDARRCIKSAVLYEGDYDVARNVWCYCCGEEVRAHTSDGDLTVVFGNFIEHLATQSHRKNTNKFWYANGADQSRRHEYLVTSEDLEKYKISLQSKLLKRIEDEQKRHNDELRRIRMDDATRDQTASAPFAVAASDDNSSSSRTYATVTSAEGIVQNPSGMHEGRRVWGGGIVKYKSTSEWIPWDIDLDDESDDYASRMGGDTDAMERAMGARTAQQWHAANSITPAQGGEGGVAVADAADNSAKKVGVLALPNGLSITRIEVPPLAEGEGNVHTGGVPPWLRDDAGAVVSGDAIGPSEAGFVRNREREKEMSRRPARVGGAQWLTKQARTQRGKEKRAHDDAGEGGASGWLPAFGGVWNAAPRSVARKQFASTASGQPGHRHGTHDRRVDMAQANVQLAVPVQGAESVGSVTGLGAVLDTDAHSTLTANTRLAADVPLSVACVDGADGRTYSPSASPSAPISGSAGGVGGGGGTGNPPRLSDTYYDTVVNLLQPPLHRPSLPTTNVTTNVTTNVATNAPISIPMGVARTDAELKAQRAALLAAFKKKPSVAGT* # ORIGINAL: g11243.t1 original gene structure, not modified by PASA NODE_665_length_19312_cov_48.0731 AUGUSTUS gene 2 515 . + . ID=g11243;Name=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS mRNA 2 515 . + . ID=g11243.t1;Parent=g11243;Name=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 2 32 . + . ID=g11243.t1.exon1;Parent=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 2 32 . + 0 ID=cds.g11243.t1;Parent=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 192 245 . + . ID=g11243.t1.exon2;Parent=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 192 245 . + 2 ID=cds.g11243.t1;Parent=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS exon 412 515 . + . ID=g11243.t1.exon3;Parent=g11243.t1 NODE_665_length_19312_cov_48.0731 AUGUSTUS CDS 412 515 . + 2 ID=cds.g11243.t1;Parent=g11243.t1 #PROT g11243.t1 g11243 LHNVWHSKTKTNTDTCRLTAEFMRVFVEEAAYRAAELARAEGLARVEPQHLERVLPQLLLDF* # ORIGINAL: g4237.t1 original gene structure, not modified by PASA NODE_908_length_15978_cov_43.0125 AUGUSTUS gene 3816 14846 . - . ID=g4237;Name=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS mRNA 3816 14846 . - . ID=g4237.t1;Parent=g4237;Name=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 14705 14846 . - . ID=g4237.t1.exon1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 14705 14846 . - 0 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 13690 14438 . - . ID=g4237.t1.exon2;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 13690 14438 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 13144 13451 . - . ID=g4237.t1.exon3;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 13144 13451 . - 0 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 12849 12892 . - . ID=g4237.t1.exon4;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 12849 12892 . - 1 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 12311 12518 . - . ID=g4237.t1.exon5;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 12311 12518 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 11875 12086 . - . ID=g4237.t1.exon6;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 11875 12086 . - 1 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 11461 11673 . - . ID=g4237.t1.exon7;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 11461 11673 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 8004 11314 . - . ID=g4237.t1.exon8;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 8004 11314 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 7111 7498 . - . ID=g4237.t1.exon9;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 7111 7498 . - 0 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 6668 6845 . - . ID=g4237.t1.exon10;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 6668 6845 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 6262 6472 . - . ID=g4237.t1.exon11;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 6262 6472 . - 1 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 5664 5764 . - . ID=g4237.t1.exon12;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 5664 5764 . - 0 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 4993 5123 . - . ID=g4237.t1.exon13;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 4993 5123 . - 1 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 4398 4465 . - . ID=g4237.t1.exon14;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 4398 4465 . - 2 ID=cds.g4237.t1;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS exon 3816 4022 . - . ID=g4237.t1.exon15;Parent=g4237.t1 NODE_908_length_15978_cov_43.0125 AUGUSTUS CDS 3816 4022 . - 0 ID=cds.g4237.t1;Parent=g4237.t1 #PROT g4237.t1 g4237 MCTYRSHFGASVAVGTGVDQTGFVASAPTCTSGPRSIPVYAPSSPSETAASEIQWGTACSAVTGQVFTKSISTSGGTYFIAATIPRYRKNIQIQLNADSGVDFDLYLDDADCVRSNGANCINAGTTTFTTSSRYRVVGFYQASISSGFYSENGLPYNLDGAGISFSYGAAGGDSYNPLTSPRLCAGCGATPYRDYTNGDPCCGTTGETPSPCDYDTMTYRGISIQYSGRYCPLGAADSQGSCPASLSANCNSLRQMTPTGRSKDIEWIKISGTTDHVLQLYPYAFTKGSIKGAYSFESPCQSSENGRTFAFNTISSRVAVDLQATSSYPAYSFDASGQTVAVDARGTIFIGSSNRPAGIARGYVETFSSTLQYAGTVELDTTGRDGFQLSTASITPNNIRYGEAMTTGKFFTNYDVVIGSPRATRAASYSATATYNKNAFSGLVEIRSTTSTGSLTLAKWKAYGEQSGSSFGAALAVADFDGDGKNDLIVGAPTFIAMNVPDVGRVYVYLAPVNANGATNAVYSLYIKGSARGGRFGFAIANAGKTRGTKSSYEDIVVSAPFAVKPNRAANEADHGAVYLYEGRSSPVSSNYAVPTQTIYGDVSGGLLGFSLGSGATVASASGIMDIMAGQPGFNNGAGRVVTLFGALEADLSIAVAPSSGATKFPIISPFSHDVAILNTGATDVAVVVTVTVDRNWWPIGLSFPTWTGFNACTGSVPTFQCASSTNIVAGVPKVVSLSVPTQSDTTIPPTFASVSISVSIALANPKLNVDRNLANNAASVTTPVVSQATLDVRFSNSNQMNPYLVSDPSATTIPFGQSLLELYPVQITNTNPMGTAFGIRAMIRLPLGMSYAQSSNLTFPALFFNAGTYKRTALDATIAGSSILTISLDALQPNTGFVVSGIRFNVDRVLAKNGDFSNIPFTVDALQSALTTAAPSLTLSSPRVASDNVPASLAATLTNVSATAVAGQVVTFVSSITNSGQGSATAITVSLTYETRLQFISVSGLYLACTAAVVVDATRMKTTCTRSLTLDPLASGSAQFTFKVDEAALAATGATASTAVSLAGTYRDINGDRTFTAATPNQKVQAQVDLRLSSIVLRATGAVVPGATVVARITVANMGPSTLAANGVRVTLVYPKDALTPTNASWSSTVTGASFVIPQQFPARTGLVLDFPFTISAGLDWARTSLAFTASAAPTNGAVVTAAGMLNLMDTTIAVDFRQNIGFAVSSYTLERHVNQIVVSRLRLRNSGPNPTYADATRTCTVKVTLSTTKGSASVDADSFKTCTAVNANSVYNCPVPVIPVGESYVLALGYSFNAPTNGTFVGEVSCTYLPDGGSSDVDPSAEDNSVRYDVSVIEYGTIFVAIAPITPASIIRTTFPVLMRVHNTAAGDGLPAAKGITVTVGYPSDLCDFNEVGTNAVTDNPPSVTIALKSAGTITITVPSLDAAPSEDSSLQVRLLFVIHSDVRPQQDVSISATVDSVTTNTNPTKVFLKTMKTVDGIVSSSISVRLDPPETVRANNVPMRLSDGSFASRTAQLGNITATFTLRNLDYSFPAAVAANMTVLLSFGLKGYMPYLSVDDYMQSLSQRANATLTAEYNSYAADTDKFNTMAAAQFASFFNRSNVKVVAPAGVTCTRVTQLQFRCGIPALGVDSTVVYVVVMDAITYPRVAGVRVTLNATVSVTDGAIYSLSVRPPSRTQITAGIDIRSAILYDARAGQSVSAECMCKLSKCSLSSDPVPGGGGRASSSGGSPMAAIGGAIGGCVVLSALGMVAYYYRARITAALQSRGKWNFKGDRGSYTDNSSHVALAEIASNLDTKDALYSRDGRATKTLSIISNHSVYDEDHVDDNYSHVDESSFIDEIPRDRIKLGKKLGSGNFGDVWQGILYPEGIVTAVKSLKEGATLEQNKLFIEEAQLMAELQHKNIVRTIGIIKRGAPILLVLEFMSNGSLLSYLENKTEDDLSRKTLMGMCRDVAAGMVVLQRRGLVHRDLAARNVLVDGDGTCKIADFGLARHLESDYYFSSSKQQIPLKWTSPEAVHFKKFSSASDVWAFGILCWEVFALGEKPYGRMSNAEAVAMVDRGERLSKPAMANDRIYATMMSCWAAEPRERPAFIKLFSEFQGMFLGQSRTSQLPSESEGYVQLDPTEAYASYVSPTN* # PASA_UPDATE: g4236.t1, single gene model update, valid-1, status:[pasa:asmbl_9945,status:12], valid-1 NODE_908_length_15978_cov_43.0125 . gene 37 3300 . - . ID=g4236;Name=g4236.t1 NODE_908_length_15978_cov_43.0125 . mRNA 37 3300 . - . ID=g4236.t1;Parent=g4236;Name=g4236.t1 NODE_908_length_15978_cov_43.0125 . five_prime_UTR 3235 3300 . - . ID=g4236.t1.utr5p1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 3231 3300 . - . ID=g4236.t1.exon1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 3231 3234 . - 0 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 3055 3132 . - . ID=g4236.t1.exon2;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 3055 3132 . - 2 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 2413 2477 . - . ID=g4236.t1.exon3;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 2413 2477 . - 2 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 2138 2224 . - . ID=g4236.t1.exon4;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 2138 2224 . - 0 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 1936 2022 . - . ID=g4236.t1.exon5;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 1936 2022 . - 0 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 1560 1646 . - . ID=g4236.t1.exon6;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 1560 1646 . - 0 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 1144 1247 . - . ID=g4236.t1.exon7;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 1144 1247 . - 0 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 713 738 . - . ID=g4236.t1.exon8;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 713 738 . - 1 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 286 390 . - . ID=g4236.t1.exon9;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 286 390 . - 2 ID=cds.g4236.t1;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . exon 37 73 . - . ID=g4236.t1.exon10;Parent=g4236.t1 NODE_908_length_15978_cov_43.0125 . CDS 37 73 . - 2 ID=cds.g4236.t1;Parent=g4236.t1;3_prime_partial=true #PROT g4236.t1 g4236 MASALARMIPRAATMAIRANVPAVRPMFALRPSLAATASRMYACHSHSVVQIQKPAPEFQATAVVDGQFKQVSLADFKGKWVVLFFYPLDFTFVCPTEIIAFSDRVKEFKELDTEVIGVSVDSHFSHLAWINTPRKQGGLGSIGFPLVADLKKDISRSYNVLIEEAGIALRGLFIIDPKGTLRQITVNDLPVGRSVDETLRLIKAFQFNEKHGEVCPANWTPGKDT # ORIGINAL: g208.t1 original gene structure, not modified by PASA NODE_3213_length_4003_cov_36.6698 AUGUSTUS gene 161 3797 . - . ID=g208;Name=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS mRNA 161 3797 . - . ID=g208.t1;Parent=g208;Name=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 3776 3797 . - . ID=g208.t1.exon1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 3776 3797 . - 0 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 2839 3615 . - . ID=g208.t1.exon2;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 2839 3615 . - 2 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 2326 2492 . - . ID=g208.t1.exon3;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 2326 2492 . - 2 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 2132 2166 . - . ID=g208.t1.exon4;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 2132 2166 . - 0 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 945 1938 . - . ID=g208.t1.exon5;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 945 1938 . - 1 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 576 806 . - . ID=g208.t1.exon6;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 576 806 . - 0 ID=cds.g208.t1;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS exon 161 293 . - . ID=g208.t1.exon7;Parent=g208.t1 NODE_3213_length_4003_cov_36.6698 AUGUSTUS CDS 161 293 . - 0 ID=cds.g208.t1;Parent=g208.t1 #PROT g208.t1 g208 MSNCSLLGNSAEVFGGAISTSGPVSLALIDSRFAYNRAWDKFGGAVHADLPTDVSITRCVFSGNVALFGGGAVAIFRPLKESVASVVNTTFLRNAAVEGGAIFTKPALSPAELVGATLLNNTATFNGNVVSSPPVGVTFCESVGGASVASGYSINSFCVRQIDGYGNVVSTSDDATLTLRVSITPTTAQVVGTRQKAVFAGYAKFPSFTIAGQEGSYSLTIASSRKLYDSANFTLTVPVQIGGCPKGTTLAAKSGLSFDVCTAVAMTSVPVGIIVGVLAPTFVLGIALFFCYYRRKREAILRRERTWVVDLNDLELSRLIGKGAFGKVYLGTYRNTTVAVKMILFEDKEGGEPGEGRRDSLLTRKINAAALADESRDRRGSSSQSGSGGATNTITNSGINTNVNLSGNTSSTGGISAYNGIGSGFGNNNSGGITPFSGVVSAGTTTSADAEEQVGAAGDPGPAPVSVHGEDAAREDSRHGSGVRNEASNTEAIITHPIQPIGEGVTQMQGEGVGTHAESECVVVVITPQSVERQRSLYATIAENAFAADPNDNVPLAVERPAGATLSASVLGGLHNSNSSNNNNNNSIVGVAIATVINSNRTGTTHPNPISQSPLSSSGRSGTQALTTLRKRLKRLKRDRNAVQDFLKEVQTMCSLRHPNIVLFMGACIKHPDLCIVTEFMSNGSLVDLFDRMDLQFNWRLRKDFAIDAASGMTYLHSATPPILHLDLKSPNLLIDSHMRLKVADFGLATLKNVNSVHQARGTLFWMAPEIIKKCNPTEKSDIYSF # ORIGINAL: g2953.t1 original gene structure, not modified by PASA NODE_18828_length_170_cov_25.5789_potentialcontaminant AUGUSTUS gene 34 170 . - . ID=g2953;Name=g2953.t1 NODE_18828_length_170_cov_25.5789_potentialcontaminant AUGUSTUS mRNA 34 170 . - . ID=g2953.t1;Parent=g2953;Name=g2953.t1 NODE_18828_length_170_cov_25.5789_potentialcontaminant AUGUSTUS exon 34 170 . - . ID=g2953.t1.exon1;Parent=g2953.t1 NODE_18828_length_170_cov_25.5789_potentialcontaminant AUGUSTUS CDS 34 170 . - 2 ID=cds.g2953.t1;Parent=g2953.t1 #PROT g2953.t1 g2953 NREAEKKLDQPKEEKKEPAKDAKDVKDAKDSKDGKDKKKADGKD* # PASA_UPDATE: g8463.t1, single gene model update, valid-1, status:[pasa:asmbl_2841,status:12], valid-1 NODE_1863_length_8851_cov_42.4727 . gene 3388 7781 . - . ID=g8463;Name=g8463.t1 NODE_1863_length_8851_cov_42.4727 . mRNA 3388 7781 . - . ID=g8463.t1;Parent=g8463;Name=g8463.t1 NODE_1863_length_8851_cov_42.4727 . exon 4207 7781 . - . ID=g8463.t1.exon1;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . CDS 4207 7781 . - 0 ID=cds.g8463.t1;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . exon 3867 3947 . - . ID=g8463.t1.exon2;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . CDS 3867 3947 . - 1 ID=cds.g8463.t1;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . exon 3388 3766 . - . ID=g8463.t1.exon3;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . CDS 3622 3766 . - 1 ID=cds.g8463.t1;Parent=g8463.t1 NODE_1863_length_8851_cov_42.4727 . three_prime_UTR 3388 3621 . - . ID=g8463.t1.utr3p1;Parent=g8463.t1 #PROT g8463.t1 g8463 MSSAGSDVDGGHDASAVASEGEGGGAGAYGVYGWDAPETEWAAWDETQRAREVDRGALLEAELRRLHAHVTESASRRNEEAVAAAALAAKLRADLERSELLRRRLENELARAHAAGAEHECAGASAQAAYRDIATRLADAEEVASTWEAAAHAAADALERERTLHAEAQKEGRHSMLAYDAELAAARAELSRQAHSIVALQLALDEARAQIALETKSLRDQRAVSEGKASALTTAEGRIATLEHLLEEAKRSAVTARGEADVVLANHEHLTAKLSAESESLCAKQEECAFLKSRIASLEGDLTHSTALLGDRDVVIAEFAGRLRRHEVAVGELRAELDDARSDQRRIDASYAASAAEIAALCRRHTGDHATTLERMDGGGAITDTPVADGDMMWPPAPERLVAVVRDALALLHGTADRRLAAANAGTAATEQLAAECQAYRDSLRDQGRALHDARTALANAREGLARAEAELNERALAVGRVEALLEATRRDSAHELARAALDVDARQAFVLSLCTRLRALCEGALPDAADGLAPTAAFDRDGSFERDSPRLSWPEVRAAAAEAVRAVALRLQVDISAAAATREALAGAEAVHRAECRKLRESLEAAERTWTRRKSDDEARFVSTIAQLRERCELAEGQAGSLQGKVHEMQAAMARTREESVEGRLSAEAAAKKASALFYGVCALRSALDAALRRVAELSMQKSLCVAQLRGADVVRIQLLELSRILGAESETSPPDARKFAPTSTRKVCMRAAVLTVVAARRFRLLPREAALGFVVVGDRLCSQFVKAAGAHTAEDTASPELMGATSEACLAAVSRADRIRRLMSLPLANLSVGSAGLSPADRHHTGWTPLPGGGAIVNGGLSTGLRGPLAVVRKAIVHFTGRLRDSDSRLAAATAELGEARCAAAEALTGRALAEGRLAECEAVLQEASARVAAAERVAASSVSLAEHQALTRECEALKRRLADACDERNMLSDAVEKSSRDVAGLAAESGAARRFASEREAEIKALSIDLAGVRVQLADRSDECTRLQTLLAHAEEAAASSRRALVAGSDSNAVLRRDLNEAQDRSLSCARELDVVRGRLAAVEKELVEYRAREQQGLEAVRGADAAAAAARHRVAVVEGETQRFKKELEVCRQERAALLARCASLHADLGAQTTHCERLKRELAAACVRAGGPTETDPPRAVSPAHTGSPRKYTGDVQAQATNIHAHAPAVVELGSDRAEAPRLTSAGTPKVRTSTVGGRCAATPGKSLASELSRALAAADD* # ORIGINAL: g8462.t1 original gene structure, not modified by PASA NODE_1863_length_8851_cov_42.4727 AUGUSTUS gene 78 2658 . - . ID=g8462;Name=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS mRNA 78 2658 . - . ID=g8462.t1;Parent=g8462;Name=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS exon 963 2658 . - . ID=g8462.t1.exon1;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS CDS 963 2658 . - 0 ID=cds.g8462.t1;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS exon 709 800 . - . ID=g8462.t1.exon2;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS CDS 709 800 . - 2 ID=cds.g8462.t1;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS exon 521 583 . - . ID=g8462.t1.exon3;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS CDS 521 583 . - 0 ID=cds.g8462.t1;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS exon 335 416 . - . ID=g8462.t1.exon4;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS CDS 335 416 . - 0 ID=cds.g8462.t1;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS exon 78 235 . - . ID=g8462.t1.exon5;Parent=g8462.t1 NODE_1863_length_8851_cov_42.4727 AUGUSTUS CDS 78 235 . - 2 ID=cds.g8462.t1;Parent=g8462.t1 #PROT g8462.t1 g8462 MATAPARPWALQSDKNPFDDDFSVNFVPRNSDASSQQTSAVAVTAPVITSSVTQRAPETPPTRTSAASRFLVTSAPDSPQSEVGTALAPSQPQSQQATSPGEGQRPRRVSFSSASHAGPSVATTISMSSPAALVNTAHTGPATSPLRGVTASRSAIPAPSGASASSAVAVTVAVTVATPSTTAAANSVGEASRARSPRPAVLPVVARVANEGRRDSEEVSPGPGPSPSSGSSVPLQVRPDRRFSVTPVAEGARESSSSSSDSDASEGETEESPKAAAPSKPKDHWNPAKMKEPVKSNLKRPRPPGTPARHVRFTLPDDHVDKDSTTTVAPRVRRNMLQNRNREIGILELHQIYIGACQQLAVAPCRAVLQNLQMAHTANQHLLKLDLKDAGPIEERGWEAIREFLFHCTKLKALSLENTGVTDAALEGMVKTLIFRQTVESLNVAHNKRLRIPGFEAVARLLTTSFQLGHLNASGVPMDKKTATILGQALGGCGGLHTLVIAQGGLKTPAILEPLMEGLARNRSIRNLLLPAGGMTQQGAKLCAHMIQQSTTLRHLDLSGNAIQADAVATHNHIQKLVLARNKIHADGLRTLSVALMKNRSLEVLDISFNEVAQPEALEVLKNALLCNRTLSELYLTATGMTSEGAIVLAESIAESKSLVRVDLCRNSLGTAGLLALRSALRMNTSIQQLAVDATGS # ORIGINAL: g3707.t1 original gene structure, not modified by PASA NODE_570_length_21024_cov_44.1482 AUGUSTUS gene 37 4570 . - . ID=g3707;Name=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS mRNA 37 4570 . - . ID=g3707.t1;Parent=g3707;Name=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 4487 4570 . - . ID=g3707.t1.exon1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 4487 4570 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 4055 4191 . - . ID=g3707.t1.exon2;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 4055 4191 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 3286 3772 . - . ID=g3707.t1.exon3;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 3286 3772 . - 1 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 2887 3041 . - . ID=g3707.t1.exon4;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 2887 3041 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 2304 2505 . - . ID=g3707.t1.exon5;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 2304 2505 . - 1 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 1891 2010 . - . ID=g3707.t1.exon6;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 1891 2010 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 1537 1612 . - . ID=g3707.t1.exon7;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 1537 1612 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 1177 1328 . - . ID=g3707.t1.exon8;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 1177 1328 . - 2 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 847 987 . - . ID=g3707.t1.exon9;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 847 987 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 433 669 . - . ID=g3707.t1.exon10;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 433 669 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 37 238 . - . ID=g3707.t1.exon11;Parent=g3707.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 37 238 . - 0 ID=cds.g3707.t1;Parent=g3707.t1 #PROT g3707.t1 g3707 MADRAVQKTADTRIKKYVRAEWAYAAQKGDELTLAEGDILGVVRIEDGGWWLGFKGDKLGWFPSNLTVEADISEVPNIGEAVVVSVDGSDGVLSGDDVRRYFNRLRGEDSDVSKIEVPSLPQDAAGNDDMRASMASIASSPLDDSSLRNGADVTLHPPGDDKPPGPGEGESREERWFDGAPADICNGLSKAEMNRQEAVFECLTSERAYVLDLKIIIQKFLHPIRAKKAMDGKDMAIVFSNIEQLLPVNEELLRNLEARRKQSMKVDRVGDVYLMMADFFKMYTLYCSNFECALIKLDKELKHNKNLRTMIDKIERTKDCRHLNLQSFLIKPVQRICKYPLLIKAVVKHTSPDHVDFTLLNKALEKIETVVAVVNEAGRLVDGTRRMLEVQGKLKDAPDEELVTPSRRLKREAAMFELVGGKQEERVVFLCTDLCLIVRPGKSKQSYHVIAWIPLDRAMVNDTLDSAAGEQAFELIHLGRSKHILIAESVKKKQQWVDDLVELTTEFLDRTQAEYDAKDIPTEPELLPGTQSVTASPRAPPHGLKRNKSIDDLIGIDKKSSKSPKQTGKKTQSVIADTKTTTMAPDGGRMAMSMSAAMGTSSAAELAAAEALNKSWDENESKKAKEEEVKRQQQQQQQQQQQQQQQQQQQQQQQQQQQHEQSHA # PASA_UPDATE: g3709.t1, single gene model update, valid-1, status:[pasa:asmbl_8246,status:12], valid-1 NODE_570_length_21024_cov_44.1482 . gene 8528 11698 . - . ID=g3709;Name=g3709.t1 NODE_570_length_21024_cov_44.1482 . mRNA 8528 11698 . - . ID=g3709.t1;Parent=g3709;Name=g3709.t1 NODE_570_length_21024_cov_44.1482 . five_prime_UTR 11676 11698 . - . ID=g3709.t1.utr5p1;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . exon 9759 11698 . - . ID=g3709.t1.exon1;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . CDS 9759 11675 . - 0 ID=cds.g3709.t1;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . exon 8908 9572 . - . ID=g3709.t1.exon2;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . CDS 8908 9572 . - 0 ID=cds.g3709.t1;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . exon 8528 8747 . - . ID=g3709.t1.exon3;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . CDS 8639 8747 . - 1 ID=cds.g3709.t1;Parent=g3709.t1 NODE_570_length_21024_cov_44.1482 . three_prime_UTR 8528 8638 . - . ID=g3709.t1.utr3p1;Parent=g3709.t1 #PROT g3709.t1 g3709 MHTRRVTLCADIVHSTPNLKSRSVPSLILTACIVAMMRHQSGQQTVMGRCTGRTVVMQSAAARRATFNCCLVIVQVFSGVFLLVSSLPSGDARTPRYSLTQSASRVSASSSEPLSVNYSCTKDGLLDYWEDTHGVPLRDAFRTVEGRSVPDLLKTTVWLPESADDMSSANMSILLASTEILVDFPLGVIAAMTFNLVSPDTKTLPALDMPPSCRELPREDALGQALRALLQSDARFQDQASGTPISIWIACHKLSGFPNTWGWEWSRNLCAKMANPDSVYLAHMHNSTQYLIGLSFAIGFFALLTFVFLVVSHWHTWMQTGILQHGKRTAAARGVAGGRPSDVTNCKQAAAAGHTEKITNLSIKLFFTKITRVVLIFSAASFAVTTTSATQLFIVAYKTHHIAFLISGFSLLVLAMMAIVHLVVSLRHRLRPAMEIGTTHTSRQPEAADIFIANYALPQRASMVPLLSDTDVSYGTSSVDARTGGGRMAVISSSEPLRDDTFGSNRGESSARIMELNNFDTEMPTSGVSTADVVPYASTQTTDARLNKSSEELFRDLRMIVLPWIWVTAVSGLCFGWTISWVAFSIPANPESAVPILVMVVSGTFQFFHMLRTSYHMNIVHNRFWLHYKQTCKIWTAVEVVREKIETLHRSGDIARINVLMRAFKRLHDYMCLAASFDAWSSPFMDTDRNFRVDATRDFESIAETLAAAGMQMTRCFPDPESGDWIRKPRLISLDADILTHIQRADVDLAYEIACRFSIADKRKSTEKAPAAGFRGFVWPDDKQPRLPDPTAPSDNDVEAWLEDRISKLKWNDGIFVFVLFLWLVTIAFFLYYTTVHVHFNGEAVSVEKSVLAALTAIVAKIVEYHHSKQLKRTLENIEHDCHVTKAMCARVVQLP* # PASA_UPDATE: g3711.t1, single gene model update, valid-1, status:[pasa:asmbl_8245,status:12], valid-1 NODE_570_length_21024_cov_44.1482 . gene 16504 20245 . - . ID=g3711;Name=g3711.t1 NODE_570_length_21024_cov_44.1482 . mRNA 16504 20245 . - . ID=g3711.t1;Parent=g3711;Name=g3711.t1 NODE_570_length_21024_cov_44.1482 . five_prime_UTR 20007 20245 . - . ID=g3711.t1.utr5p1;Parent=g3711.t1 NODE_570_length_21024_cov_44.1482 . exon 19589 20245 . - . ID=g3711.t1.exon1;Parent=g3711.t1 NODE_570_length_21024_cov_44.1482 . CDS 19589 20006 . - 0 ID=cds.g3711.t1;Parent=g3711.t1 NODE_570_length_21024_cov_44.1482 . exon 16504 19358 . - . ID=g3711.t1.exon2;Parent=g3711.t1 NODE_570_length_21024_cov_44.1482 . CDS 16504 19358 . - 2 ID=cds.g3711.t1;Parent=g3711.t1 #PROT g3711.t1 g3711 MPSSLFSSGSVIAVASVTFILCALCPLPAYGVAAPAPAECIQNATLAVVGSGGQGILCYGPRDCLYGSDVSVRTDDPSESAFWSVINPVPSSFSTSPRVTLQVDGEAAGTLYGLTTEGLFISSDNGTTFQPVLVWNCTEAANATSPLCPAPASSSRPSGALPCSTTAPSTLSADDQVSNALFLRWTAPQAANDALYAVECDSISTFDSGQKQLSSVQIVSPSLFHGNYLTLATQGLTPSDREDYFVWFKTSQSDTGPLSGATKLIRADISAATNSTMVCNAAKAAIESAGVGKVVDVNGNAVGSPAVQVTCELFNSQDQLVVEQLVTGFVPVHMRLHRGTVTKSSSSSFVAEGAGDVNGSSPEYVTLTVTSTSMTKGASAGGLIGGTPSNGNFYITNAKRDLLHYFYIYNFGGCVDANALGMANASIHQIDVSNAPSQTLIAYRIAAAASGIDGLVATVQNGTQGLQQFTVVPSALSRIPNGGSFFFVDSLGVQWTYFFDKTGSTTRPNSTLTGTRSDNVIRIDVSNPLAASTAAEVSVVIRDAINNTPNSPFNATIPVPWPPNILVTHVAPAQPGTIGRYLITLPTDGDLSSMWETSIGGIIPLVTINGTLVRLCLESSFGADVGSTYVGSCKKDTTTDGLTIEAVYPTNPSSIAAVTDSVVAALSNPSNYPGGIVPFSVERSLFFDTLNVWQAAPGVVPVRHVVTVSVDIPKSSGNTMFSFPSQNGSFSGTICFESVAGFCPSGANVLKITRNDVYAPIRSVSAGSDPLVTVEPGHPFTNGSMVIFIEVNDGGGGAQSVLSQRGFEIVAKSGNRFKIASFPVVTTASAATSGKAFLATSNFNRFLVSATAGASATITGMIVAVGDLVYFPGDSSGATTFAQGGKMCVVATTNVPTKSFTCSGGFVANNESNQVAYRIGGSSEKNAVFSLSIGSNPTIIALVDHFLLVGDIVSFPNLRQANGNLADPTLWQNKFFRVSEVPDSRTFKVFPTITTTVTGTGEFYAIVVVRSHVSQSLKRIFDAHPRFPLNFHAHVHDVANMASVRFIYKNPGAVVPMYQHKILDSSSDTISSGSKFVLYDASNQRKVSTL* # ORIGINAL: g3708.t1 original gene structure, not modified by PASA NODE_570_length_21024_cov_44.1482 AUGUSTUS gene 5928 8060 . - . ID=g3708;Name=g3708.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS mRNA 5928 8060 . - . ID=g3708.t1;Parent=g3708;Name=g3708.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS exon 5928 8060 . - . ID=g3708.t1.exon1;Parent=g3708.t1 NODE_570_length_21024_cov_44.1482 AUGUSTUS CDS 5928 8060 . - 0 ID=cds.g3708.t1;Parent=g3708.t1 #PROT g3708.t1 g3708 MAHSVESFTETDRRTVTGGDELGDGAAKPLEWSYIFIRGTLTISVDPKAKHNEGILALDSVATDAEGRFRISTDVMIAAPLDPAKSNGTVLFDVVNRGLPLLWYVANNLPISGSDSNLPIGDAFIMRNGYTYVACGWQTDLRPRPSVLRITSLPKPIPYTSVDGVISPRVTRVMTEIEASTQFISLPGMPSIDCRNLSIASPGHIHPPPHGVAQPHARLFESSFYDGRDRIEIPREHWRFGRYTSATECVEDVNYVCTYDSSGSVNVPRTFTKGKIYTLVYDAADVLPTGIGLAVLRDCALWLKRGSAVVPLPIAVPAASRVCAFGASQSGRLLRTMIHIDACVGGDGTDAFDGIGVWVAGASQGQFNLLGGQPSQAFPHLSPVQTPFTPMEATPLPSPLSDANSSEPVSQMDGLHARINARHSNTKVIYVNTSAEYHRGDASLLHVTPDGSRDVPLPPNARAYMLNGVPHTPSSSWPPSYADGLPGFRLQQTLTNAVDSRVLYRAQIHILHKWVSGLVDPPDSAIPSLSSSTLVDAGAVYAWFAAVPNACAPAAASVSRLWRRDFGVRANGTCAYLPPVDGSAYEGSLVPQIDRSTGNDIGGVCNPLISVPVATHTGWAMRHADFGGEVQLTMLTGSLFPLPVTKKAKEMTGDPRKPLEEMYGGDKELYLAKIKASADELVASRFILAEDADGFSNAAGRLWDFVVGHA* # PASA_UPDATE: g3710.t1, single gene model update, valid-1, status:[pasa:asmbl_8244,status:12], valid-1 NODE_570_length_21024_cov_44.1482 . gene 12422 16134 . - . ID=g3710;Name=g3710.t1 NODE_570_length_21024_cov_44.1482 . mRNA 12422 16134 . - . ID=g3710.t1;Parent=g3710;Name=g3710.t1 NODE_570_length_21024_cov_44.1482 . exon 12422 16134 . - . ID=g3710.t1.exon1;Parent=g3710.t1 NODE_570_length_21024_cov_44.1482 . CDS 12562 16134 . - 0 ID=cds.g3710.t1;Parent=g3710.t1 NODE_570_length_21024_cov_44.1482 . three_prime_UTR 12422 12561 . - . ID=g3710.t1.utr3p1;Parent=g3710.t1 #PROT g3710.t1 g3710 MGAGGQCNPSTNPNNAVVEFYQRIHISGITSGSNPTVSLDSVWHGIIVGEVVVFFGVNNGGAVLNGRAFSISTSDGAAFTLKPAPTTSGVAATQGWSFEVNTVYKDAASSTSTGTDDTITGPSDSIGSAVTANDTVVYFLGNQVAGTSFLTPRTCITTSVSLNGANPNTWKCLGGLGATGTNTVMGYAVVSTAARISIVRIQTGTTSPIFNTTAPHALKAGAVVIIDDCNGMTTQEKALFQHKFFRVVTIPTLSSFTLDPPLSASLTSVSATAALWFVSIRDPSVTWMATQLVRRLSTASLYPGSVVPFVPYVLSGSYAAISQKVPGTIVGRPLFTITVDTFANTNNGGILRFPLQDNSTVTVCFDKSNKCAISSNRFVRVNIANLTTATEIATKTIAEIYKAAIPGIGDVTLGSTNIVRIYLLAGTAPLQRPELWGTNSTNALCSAWTVTDFTQSFASLIGSYATADTHGGVGTWAVDAIPFPTYTFSVDGIPSLSSFVGKTTGWGLSITDNGAAATATIRVSGSKSATVPSSGVLNVGRVLTVTDKTNTFVLGSPTVKISNTVSKDVTPNPTKGNQLAGITFTAVNGELRDKRRIQIPAPTLMQTGQALTFWSINGGSPRKYAVWFDKSENSTEPVAFEVPVDVRNAPNVTAVASRIAAAVDPLPGVTASSRPQRLQVTCGQANTTVHGLSFNLFAASDNRMFTVWMDLGGSTPTFPGYTTPVRVSITNPSASANDVAQAVRAATLAHAAFASVFSISPVRLSSNIVFSQRVGGDVVGRPRVKLTVAASDITTNVAVGGNLIRLYSGLTEYTLCIRQITEDCVKPESAFMKIIDCTNAALCDSAAEVLAVIQTAVDAFGPTVFSTVSVTSLSGSVLYILTLTPGLAKPAILELTGSWVNVESMVDAGHMPRSLTTVDKFGGLNGQDGIFVPAGNASSTGWKIVESIRGSFDSASVEQDVTLASLNEALSLGNVVDTTGATLLVKDIDGSAGSRVSGNGDSGRDALRTLYTRDSRFASSMTGVLEGFGAALAGTNVTCRLWGALANTSRTPGYDRTCQIGAPVTFGLRSADTNTATPLKMYTPTAQWASGTANISWVVPETAGNTATSFENAMTEVQYMRCDAGRGSCEGAITCPGAGNTCPTASTIARSLVLSETVADALYVVRVRTKYPLSEYGQLSDALYTASPCP* # ORIGINAL: g11240.t1 original gene structure, not modified by PASA NODE_3343_length_3686_cov_39.8383 AUGUSTUS gene 496 3390 . - . ID=g11240;Name=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS mRNA 496 3390 . - . ID=g11240.t1;Parent=g11240;Name=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 2803 3390 . - . ID=g11240.t1.exon1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 2803 3390 . - 0 ID=cds.g11240.t1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 2264 2357 . - . ID=g11240.t1.exon2;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 2264 2357 . - 0 ID=cds.g11240.t1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 1794 1943 . - . ID=g11240.t1.exon3;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 1794 1943 . - 2 ID=cds.g11240.t1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 1176 1477 . - . ID=g11240.t1.exon4;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 1176 1477 . - 2 ID=cds.g11240.t1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 880 1035 . - . ID=g11240.t1.exon5;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 880 1035 . - 0 ID=cds.g11240.t1;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS exon 496 642 . - . ID=g11240.t1.exon6;Parent=g11240.t1 NODE_3343_length_3686_cov_39.8383 AUGUSTUS CDS 496 642 . - 0 ID=cds.g11240.t1;Parent=g11240.t1 #PROT g11240.t1 g11240 MARPSPEAVDGSPLDSAYAQLNAARTASATASIAHGKRREDPTYEDIFEPSEGSGPPRRASVDALGRPECPICGRSLSGMSEVAMNAHVEDCLTVPPMARGSQTVRRLGGSSNSAGGAGSSAAPARGEGPACPVCNATMSGMSEVAMNMHVDDCLSGQLDGAARLAPGNTATVQRVSGGGRTSATAQHPPVGRATPTYSFFSIFNGCPYKIVCGSSWQTTKGSETGDVSRFIVLGTNVGLYVMDVTSVVPGDLMLVSTRKFHHVIALGELGVAVSISGKSFQVCLHDLNSLSSKARQPPTSSSHLGSGSNSLLASDVFKGFRARESKPRKLPGTKGALCLRVARSPATGFVYLCAVMPRSIVLMQWSPHPFNKFMKIKDFQTTITTAPPCATLVFFDGATLPSLCVGARTDADTRTVRLACIDLNATPAAVCVMLSTPAGWNAVGGGGELPAVVKISQLTAHKFIVSQESTNTAKLFF* # ORIGINAL: g537.t1 original gene structure, not modified by PASA NODE_443_length_23651_cov_37.1837 AUGUSTUS gene 2441 9666 . + . ID=g537;Name=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS mRNA 2441 9666 . + . ID=g537.t1;Parent=g537;Name=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 2441 2655 . + . ID=g537.t1.exon1;Parent=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 2441 2655 . + 0 ID=cds.g537.t1;Parent=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 2814 2924 . + . ID=g537.t1.exon2;Parent=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 2814 2924 . + 1 ID=cds.g537.t1;Parent=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 3399 9666 . + . ID=g537.t1.exon3;Parent=g537.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 3399 9666 . + 1 ID=cds.g537.t1;Parent=g537.t1 #PROT g537.t1 g537 MDTSTVQSDHGSLYDSAAFQNVGKQIADAAKIAKAAADESPSVSSDIVEAIIRGAVNVDAPLPKRTVRLFVSSTFTDTAHVRNVLMEHGYPLISHACNVFNWSFQTVDMRWGVRKSTDDDHSTWAMCMKEIQRCLDVSAGPSFLVILGDKYGYRPFPRRIERGLFEQLRARAQEMGLPCNLLQTSGDETTTTTTGRWWTLDENAVPSEYVLANKSALLPNILSADPELQASANAAWWSAFEEMQSAMFTAAALMHADGQLDRETADQFRISITHAESIVGIVRNRNRNSNALLFRRKFATPVVPSDDGAAAYTDIASDDHVTAAVTTATELLADLKNSTLPASLSAKRVHDVTAPPWTAGGLNPDGNPTHRDHVQHMALEIMRAIGESVVANFKAQPRSPDDVYDEALHHVTLRASKSRMFVGRSALLASIATYISSESANPLVVHGRSGAGKTALVASAAMAAAKSLPGAVHVVRFLGTSAGSTAAVDLLRSLCLQIARAYGGDEGAVPTESKELGPFFRISLEYARMSKPLVIFLDSLDQLLSQVDPDLSWVPTSLPAHVRLVVSVLPDQGSAYAALRSRTDLPNDHYIEVHPLDATEVPELFDALLESSHRRLTSEQRAAVLLSTDNWLPLYVKLAAEHSRQWSSAAPPRMFPSTVREMIRGLFERLEERHGVVLVSHALGYLTASGGGLSISEIDDVLSLDDAVLNDVFEWWDPPMRRLPPSLWLRIARDIDEFLIERGVDGGATVTSWYHNHFAEAARERYLKGSNTSSGGESIAVSCALTLTEAHTALAEYFSGKWVSVPKPYTDRHGREGKADRRVTDHRAWTFQGSVWSSSPALNRRRIERLVFHLLRANQWDSPLLPSILCDLGYVYAKLRSGSLLKLLDEEYNRVAETAPDDWPWRSDVEAFQKFVAKRAHALGETPRVLLQDAYNEHEASPVFFAAARLLASGDIPGDAVAGGAPPYLKCLSKSQEEDRCRMVLEGQLDSMWAAHSAPGRALATSGFLEAGIYVWDLRTGAKMRTFGSGKVHVIAFSFSPDGTLLAFGDVDNVVCVVDVRRGNVLHRLRGLAMTVLKVAFSSNGTELMGIDGPNTLLAERDDIHMTSTVIVWSIVTGAALRTVNTFATTLCGADVSCDFGVIAYAPTDLRRKGLQGYPIQIFDANSGKLIMSLAGSGKRERSKTLAFSPTDACRLVSASRSSIRGWNLLSPDAPLFEVDLAGFGFPEIHSLFWSPIGDAVYMSRTCGTKETGVLQGINGWDATTGIARGIEVGVPCKDRVLLVLFDAAGNPQYALESENQDETKRLWDIRVGNNKAPPLAETGGVEGATPPRPHHKSHVSRLIVAPNSKTVASACHRQESPCYLWDVETGAYLRTILHPKSKTKGGEDGLPKPASLSELAYSPCSMRLVTASDWELNARVWDVATGALSCAPLNHGGQVTSLCVDGAHIVTGCLGSSKSPGRIRVWDAVTGDARNDVTPGISEGAVNVWIVGLTLHADGQRVACATAQGWVQVFDVTTGTATTEVLRMPHDKNLPSAFRLAFSSDNSNGSERLYVTGSSLDWPVRSVDLSTGAWREEERVPRAVAEMFGERCWSAELGVHLTVEYAEQRLHVVMDTDCDARDVSPDGCGSAPVHVASLMNAVDITTAKLCAHANGQVSLIVGERVGRVHIFRLILPNADAARRWVAAGISRQSQEQELWVTCCRAVEGWLADHLTTAGDDVTQSTAWERTRDVWLHASSKEEGSRARLREAWLREAQAATSSPDDTIAVTKATVARLVRQTESKLFRRCAFETQIAIPYENGMAAGAAASEEDSYERGGWVRCEELWQKKVKDLRRSTGDKSFGPLDVEENWGKRKRELALWLQGMDESAGDVLARLNSYCARIVTYHRVVVTGIHAWLASNAARLGVSLAPASPHEEKFGSVFGSRRTGWQGAFNRWTEKTRHSPGKGSRQGRELLWTVSTTHNGDEAAALYELRQTQAELRGAFDLHDAEGVAMEAIYAGNIRPAIREWIAAGIAASTAAAAEGVSDSSWTDAQMKFEGKKGEYTDATDYYTRARWMKLLEIADGVPEGEALAVAVAEAISVAQQHLRSECGLWDDEARHLHTPFLHLVSEHVRKWLDSHKSAAEDRHVALYETALEQWGTCEWSHVTECPQRQRRLWQEWVKTGGHVLPHKLILNARKNLVEAHQLPAKYDVD* # PASA_UPDATE: g538.t1, single gene model update, valid-1, status:[pasa:asmbl_7323,status:3], valid-1 NODE_443_length_23651_cov_37.1837 . gene 9966 15884 . - . ID=g538;Name=g538.t1 NODE_443_length_23651_cov_37.1837 . mRNA 9966 15884 . - . ID=g538.t1;Parent=g538;Name=g538.t1 NODE_443_length_23651_cov_37.1837 . five_prime_UTR 15670 15884 . - . ID=g538.t1.utr5p1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 15617 15884 . - . ID=g538.t1.exon1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 15617 15669 . - 0 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 15077 15448 . - . ID=g538.t1.exon2;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 15077 15448 . - 1 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 14602 14712 . - . ID=g538.t1.exon3;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 14602 14712 . - 1 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 14278 14360 . - . ID=g538.t1.exon4;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 14278 14360 . - 1 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 14074 14157 . - . ID=g538.t1.exon5;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 14074 14157 . - 2 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 13679 13776 . - . ID=g538.t1.exon6;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 13679 13776 . - 2 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 13092 13274 . - . ID=g538.t1.exon7;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 13092 13274 . - 0 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 12580 12639 . - . ID=g538.t1.exon8;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 12580 12639 . - 0 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 12236 12395 . - . ID=g538.t1.exon9;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 12236 12395 . - 0 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 11890 11957 . - . ID=g538.t1.exon10;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 11890 11957 . - 2 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 11394 11527 . - . ID=g538.t1.exon11;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 11394 11527 . - 0 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 10589 10735 . - . ID=g538.t1.exon12;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 10589 10735 . - 1 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . exon 9966 10201 . - . ID=g538.t1.exon13;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . CDS 10111 10201 . - 1 ID=cds.g538.t1;Parent=g538.t1 NODE_443_length_23651_cov_37.1837 . three_prime_UTR 9966 10110 . - . ID=g538.t1.utr3p1;Parent=g538.t1 #PROT g538.t1 g538 MSALHATRLLGRVASVARTAAKRTNGVTPLLRNSAFVSRGLSSIHIARPLLTSVRFPTGLASAGSSPRMYVVGPSDQRGNASGIDPAVDPFSSLGSVAAAAVADETELAQQSFEEAVVAELSGGKSAPIVEDQTQWPIKDQIARKTYVTKSDAEIKDPVIIFSTVWDKLEKEYGAEKMTFPKEIIWLNGAPGSGKGTNTPFILKARGISAAPLVMSDLLKTPEFQTLIDRGEMIGDVHVVGALFRTLLQEQYQLGALVDGFPRTAVQVECIKLLHDKMMDLRKRFFNTDSRRKFRRPIFRIAILYVSEKESLERQLKRGQAVREHNQRVLDSGYGQLLEERATDFDEKLIKKRYQIFKEHYHTLLALREHFPFHLINAQGSIEKVQDSIVGQFEYQSSLELNQRTYDVLQQIPLAAQIGVNARQELVRRLDNYQKEFPGQFERVVSLIDAEFIPVIKRNAFAGSVLVRSENALFLDPYLVDMAMDVLAERGFKCRFDEKIISVPETVDPDTYRIKFSSKRILNFFVEFPAAKLRNVEPSSKKLIGNT* # ORIGINAL: g536.t1 original gene structure, not modified by PASA NODE_443_length_23651_cov_37.1837 AUGUSTUS gene 93 1813 . + . ID=g536;Name=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS mRNA 93 1813 . + . ID=g536.t1;Parent=g536;Name=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 93 493 . + . ID=g536.t1.exon1;Parent=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 93 493 . + 0 ID=cds.g536.t1;Parent=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 657 846 . + . ID=g536.t1.exon2;Parent=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 657 846 . + 1 ID=cds.g536.t1;Parent=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS exon 1334 1813 . + . ID=g536.t1.exon3;Parent=g536.t1 NODE_443_length_23651_cov_37.1837 AUGUSTUS CDS 1334 1813 . + 0 ID=cds.g536.t1;Parent=g536.t1 #PROT g536.t1 g536 AILWGLATIFPAPVDPIAYTPLPYVKLEGAYAPNDLLAGSLARRIGEGKLIAPETVAVDHNHMMYTATEDGKIWRISVREKVFEEFANTGGRSLGLCIDITKNRLIACDVFRGLLAIDFDTKEVTVLTDSFEGNRLGFVDDCDVDDEGKIYFSDASAKFAPRLPMLPTKRAIEMDFIEHRGHGSLYSYDPKTNITEKLVSGLHFANGVTLSHDGFSVLVAETRKFRVMQHHIAGPDKGTTEVFVENLPGSPDGIRRGSDGTYWIAIVVPRMPRTDALAKFPFIRSLVARLPSYILDRVTPTESYGMVVQVSSNGVALRSLHDPSGGVGYISGVTEEGGRLYIGTILKNFITLFSLN* # PASA_UPDATE: g541.t1, single gene model update, valid-1, status:[pasa:asmbl_7320,status:12],[pasa:asmbl_7325,status:12], valid-1 NODE_443_length_23651_cov_37.1837 . gene 21351 23506 . - . ID=g541;Name=g541.t1 NODE_443_length_23651_cov_37.1837 . mRNA 21351 23506 . - . ID=g541.t1;Parent=g541;Name=g541.t1 NODE_443_length_23651_cov_37.1837 . exon 23483 23506 . - . ID=g541.t1.exon1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . CDS 23483 23506 . - 0 ID=cds.g541.t1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . exon 22777 23394 . - . ID=g541.t1.exon2;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . CDS 22777 23394 . - 0 ID=cds.g541.t1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . exon 22341 22502 . - . ID=g541.t1.exon3;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . CDS 22341 22502 . - 0 ID=cds.g541.t1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . exon 21921 21992 . - . ID=g541.t1.exon4;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . CDS 21921 21992 . - 0 ID=cds.g541.t1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . exon 21351 21671 . - . ID=g541.t1.exon5;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . CDS 21495 21671 . - 0 ID=cds.g541.t1;Parent=g541.t1 NODE_443_length_23651_cov_37.1837 . three_prime_UTR 21351 21494 . - . ID=g541.t1.utr3p1;Parent=g541.t1 #PROT g541.t1 g541 MCDLLTVEDVLEQLLKYVPTADEIALLEQHKDEVENFARADRFLFEMGRIPHYGQRLQAMYFKWQFHDKVRELVPAIETLSSACKEVRDSKKVRTILELLLALGNYMNKGARGNAYGFQLSSLGKALDTKASSNKRQTLLHYLVQTIDRKFVDAKDPTVDLPSIAVASKMSIQEIEKDVTNLKKGVKEVHAELEFQQTNKSADKTDNFLHVFEKFYKWSEDQCKSIDDKFQEVKKAFSDAVAFFGEDPKAMGPEEFFGTFSQFVTAFLVAREENEQIAKEMEEEKKKLAALKEKEEKKSGKTKDKEAETKEEKAGEFDDLISALKTGDVFGENMTAARKKGRRGSNTPRP* # PASA_UPDATE: g540.t1, single gene model update, valid-1, status:[pasa:asmbl_7324,status:12], valid-1 NODE_443_length_23651_cov_37.1837 . gene 18518 20844 . - . ID=g540;Name=g540.t1 NODE_443_length_23651_cov_37.1837 . mRNA 18518 20844 . - . ID=g540.t1;Parent=g540;Name=g540.t1 NODE_443_length_23651_cov_37.1837 . five_prime_UTR 20368 20844 . - . ID=g540.t1.utr5p1;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . exon 20264 20844 . - . ID=g540.t1.exon1;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . CDS 20264 20367 . - 0 ID=cds.g540.t1;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . exon 19998 20148 . - . ID=g540.t1.exon2;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . CDS 19998 20148 . - 1 ID=cds.g540.t1;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . exon 19296 19508 . - . ID=g540.t1.exon3;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . CDS 19296 19508 . - 0 ID=cds.g540.t1;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . exon 18518 19159 . - . ID=g540.t1.exon4;Parent=g540.t1 NODE_443_length_23651_cov_37.1837 . CDS 18518 19159 . - 0 ID=cds.g540.t1;Parent=g540.t1 #PROT g540.t1 g540 MTEATLRCAIKDLRVECLSGLWYVVMSNMSKWRNRKSMTMNFSVVERRSPAHPLLIDRIEYIRQRRLWGKRRDLRHVIEVGVSEQHDTISGALLRKKKRFITGIKSRNWCVAALGSNLAGVISTPSGPDECEWAVLYFDRTWTESEGVAILSRTVPLARTSAIHIRNLLGSDPFLRTVAAGVYPNEHNLSIFRGEVESQHTLPKRQNEEPDRPHDQDNAAHASSSNHPPQPSPANTTSKRATTPPHKATTGTASPLLRMLFGAKTPPQRSVYDAGPLPRPPSGPIFTSASSHSRSASDTQTIPTTRIDNEGADADAVLDTLADSETDIPCTPTTPPEARLTDQRQYRGFTELIVPPSNFLSQNTEATMA* # PASA_UPDATE: g539.t1, single gene model update, valid-1, status:[pasa:asmbl_7319,status:12],[pasa:asmbl_7321,status:12],[pasa:asmbl_7322,status:12], valid-1 NODE_443_length_23651_cov_37.1837 . gene 16122 18343 . + . ID=g539;Name=g539.t1 NODE_443_length_23651_cov_37.1837 . mRNA 16122 18343 . + . ID=g539.t1;Parent=g539;Name=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 16122 16263 . + . ID=g539.t1.exon1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 16122 16263 . + 0 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 16402 16449 . + . ID=g539.t1.exon2;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 16402 16449 . + 2 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 16579 16715 . + . ID=g539.t1.exon3;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 16579 16715 . + 2 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 16840 17019 . + . ID=g539.t1.exon4;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 16840 17019 . + 0 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 17306 17788 . + . ID=g539.t1.exon5;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 17306 17788 . + 0 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . exon 17950 18343 . + . ID=g539.t1.exon6;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . CDS 17950 18165 . + 0 ID=cds.g539.t1;Parent=g539.t1 NODE_443_length_23651_cov_37.1837 . three_prime_UTR 18166 18343 . + . ID=g539.t1.utr3p1;Parent=g539.t1 #PROT g539.t1 g539 MALERVGTLTHTSAVSSIYCAEFDEHAGRRLATGGENGSVHIWDLRHDVDPLLTGTFAVPSEGEYPVTSVCFTPLDENTLYIASGSKIHAYDLRTTRNAVWSVVASDDEINQICLSPKGDALACADDDGAVAIVSTALDADGAKVLKHLRGGHDNICSSVRFRNNHPGELISGGLDCRLVRWDVSRNRPTQTLESTDRSIHTPAYANGRILAKAAPANSTPLGKKSNKKGSAASTIVTNTPASSASNDPTWEDILRADEAASLGSVEEAGTMVNPPFVNAVAISSDGRRVFAGVGDGTVGVYESVVGSAKVKPLGRVRTLERGHGSAVSQIVTLDVEGSFAASGGDDGKLCMWKPLAPNPLVASLPHGKKVNWIAPEKNKPVSSRIVVADTSVVCAVYVVR* # ORIGINAL: g13573.t1 original gene structure, not modified by PASA NODE_3371_length_3610_cov_18.7216 AUGUSTUS gene 2241 3118 . + . ID=g13573;Name=g13573.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS mRNA 2241 3118 . + . ID=g13573.t1;Parent=g13573;Name=g13573.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS exon 2241 2703 . + . ID=g13573.t1.exon1;Parent=g13573.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS CDS 2241 2703 . + 0 ID=cds.g13573.t1;Parent=g13573.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS exon 2805 3118 . + . ID=g13573.t1.exon2;Parent=g13573.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS CDS 2805 3118 . + 2 ID=cds.g13573.t1;Parent=g13573.t1 #PROT g13573.t1 g13573 MQIQTRATDAIVLAETGTVPADAIVIQLTSGKLDFRVNAGSGFVSVATATAINDGLWHTVEAFRDKTVVRLKIDGKHVGEKAMGSLTAVDNLQDVFVGGTTNASSVITGGFLSTKWFVGSLRSFMYNTTNMLLTSATLNATNVPWSCGPANRTSELTMQMTTAKARADFKFVRPVVALSSLLFSCKLSGLSTGPIFTLQDDSKANLGFKANSSHVTVALDRQGKVQSLAYPVVIVTNEWHSVRLQMSSLSLLLTFLWT* # ORIGINAL: g13571.t1 original gene structure, not modified by PASA NODE_3371_length_3610_cov_18.7216 AUGUSTUS gene 145 366 . + . ID=g13571;Name=g13571.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS mRNA 145 366 . + . ID=g13571.t1;Parent=g13571;Name=g13571.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS exon 145 366 . + . ID=g13571.t1.exon1;Parent=g13571.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS CDS 145 366 . + 0 ID=cds.g13571.t1;Parent=g13571.t1 #PROT g13571.t1 g13571 MQLLQQQWLSHHIGKHIDWEGAQLINAAQSLVDGTEAFYPQPERAFKSSETVKYSLAGYDLERKQALASRRKA* # ORIGINAL: g13572.t1 original gene structure, not modified by PASA NODE_3371_length_3610_cov_18.7216 AUGUSTUS gene 1103 2146 . - . ID=g13572;Name=g13572.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS mRNA 1103 2146 . - . ID=g13572.t1;Parent=g13572;Name=g13572.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS exon 1766 2146 . - . ID=g13572.t1.exon1;Parent=g13572.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS CDS 1766 2146 . - 0 ID=cds.g13572.t1;Parent=g13572.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS exon 1103 1480 . - . ID=g13572.t1.exon2;Parent=g13572.t1 NODE_3371_length_3610_cov_18.7216 AUGUSTUS CDS 1103 1480 . - 0 ID=cds.g13572.t1;Parent=g13572.t1 #PROT g13572.t1 g13572 MGCHFRVVLVNACPSLVPQLTTRTPILTFVSHTKPERTTSGRRRAWIRHNALSPITRRDSARGIRTDELTPRTVDSQCGRRSNSGHNSSVADDCSKGHGARGNRPRDVTGVADENPDMTPLVGGLVSMPVCDAMAQKLASHGGFRKTITERQGEPVFARLVEIQERRHVIVHWDVAATVDTMLGNAATAIREERWYDAAEGHWRARFSRVAASDAGRCDGLHDDGPDWMRKLVDKAMRAGGSAGAASSLWEN* # ORIGINAL: g9316.t1 original gene structure, not modified by PASA NODE_2702_length_5406_cov_44.0259 AUGUSTUS gene 488 1957 . - . ID=g9316;Name=g9316.t1 NODE_2702_length_5406_cov_44.0259 AUGUSTUS mRNA 488 1957 . - . ID=g9316.t1;Parent=g9316;Name=g9316.t1 NODE_2702_length_5406_cov_44.0259 AUGUSTUS exon 488 1957 . - . ID=g9316.t1.exon1;Parent=g9316.t1 NODE_2702_length_5406_cov_44.0259 AUGUSTUS CDS 488 1957 . - 0 ID=cds.g9316.t1;Parent=g9316.t1 #PROT g9316.t1 g9316 MESNVLASIHAVKDSTCRLGRTAHAGRGLFATRNLKKDEVLLRTEPIAAVSDSPKDATPARTCWNCFAQPSKPLSRCRACARAVYCGRDCQAADWSLHKRECARIRAVAPKHVPDLIRLVARVWDVSTSLQAEISSKALLELEDEPLDLKSADPRVAKRTEGLVALCAVAVEFVGASGDAAPDARVLLRMLRIASRNCFSVCNAELNSVGTGLYVAAALLNHSCGPNCIPTFDGGRLVVRAGRAIETDEELTISYIDCTEPRHSRQNELAERYGFVCMCDVCEDHSPDSLDAYGSAWKCHSRQCTENGGHGGGRFWVGDDGTPTPCAACGIQEATSAVADTLSQFAQLSAVTLSGNVAASTASVLLLAELRLDMQGPENRETLEAANATMDACINKGDCEAATVWGEATLACYSRMEDALRGSVNPAHGLQLLRLAKLHWECGRPRMALPRARDAAARLEVSHGGAHPLTREAFELVTVANMALSSSSG* # PASA_UPDATE: g9317.t1, single gene model update, valid-1, status:[pasa:asmbl_4859,status:3], valid-1 NODE_2702_length_5406_cov_44.0259 . gene 2383 5040 . + . ID=g9317;Name=g9317.t1 NODE_2702_length_5406_cov_44.0259 . mRNA 2383 5040 . + . ID=g9317.t1;Parent=g9317;Name=g9317.t1 NODE_2702_length_5406_cov_44.0259 . five_prime_UTR 2383 2547 . + . ID=g9317.t1.utr5p1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . five_prime_UTR 2663 2763 . + . ID=g9317.t1.utr5p2;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . exon 2383 2547 . + . ID=g9317.t1.exon1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . exon 2663 2921 . + . ID=g9317.t1.exon2;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . CDS 2764 2921 . + 0 ID=cds.g9317.t1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . exon 3223 3309 . + . ID=g9317.t1.exon3;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . CDS 3223 3309 . + 1 ID=cds.g9317.t1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . exon 3717 3867 . + . ID=g9317.t1.exon4;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . CDS 3717 3867 . + 1 ID=cds.g9317.t1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . exon 4233 5040 . + . ID=g9317.t1.exon5;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . CDS 4233 4703 . + 0 ID=cds.g9317.t1;Parent=g9317.t1 NODE_2702_length_5406_cov_44.0259 . three_prime_UTR 4704 5040 . + . ID=g9317.t1.utr3p1;Parent=g9317.t1 #PROT g9317.t1 g9317 MATAVISLAPSNGEPMRMKVEQNREFKHECSLMLLCKFRYHVTVAVSAIGLKSIETVSISGTSFRVSENVQNGDTITVEGSWTLPQHALATMDKKREVMSVEIGVVFHDGRKQTLTSSLQGKYYMGSVGSDKSVTGLNSVTLNFDLGTGHGFGVPHYDAGEGRIRAASTTSNRNSMGVSPLPHRSSLGASSIPTIAGPPKSPGLMPVSPAMTMGSSPRAAPASPMMASLSLSTSPAPMSLSTSPGGFIHSPAASPGALRSQAPASPMVAPAAFGGDLIPGLAPPPTHH* # ORIGINAL: g9421.t1 original gene structure, not modified by PASA NODE_2039_length_7990_cov_45.2176 AUGUSTUS gene 7234 7990 . + . ID=g9421;Name=g9421.t1 NODE_2039_length_7990_cov_45.2176 AUGUSTUS mRNA 7234 7990 . + . ID=g9421.t1;Parent=g9421;Name=g9421.t1 NODE_2039_length_7990_cov_45.2176 AUGUSTUS exon 7234 7387 . + . ID=g9421.t1.exon1;Parent=g9421.t1 NODE_2039_length_7990_cov_45.2176 AUGUSTUS CDS 7234 7387 . + 0 ID=cds.g9421.t1;Parent=g9421.t1 NODE_2039_length_7990_cov_45.2176 AUGUSTUS exon 7554 7990 . + . ID=g9421.t1.exon2;Parent=g9421.t1 NODE_2039_length_7990_cov_45.2176 AUGUSTUS CDS 7554 7990 . + 2 ID=cds.g9421.t1;Parent=g9421.t1 #PROT g9421.t1 g9421 MRTCSSKCATTGSILVASILFALLAPSLAQQRYYSATPVFTLQSDLFGDAYGQAITAGDFDGDGNADVIAGAPYYTPYQDTTTSGMYRDRTQEGAVYFHYAPQQFGGSRDLASMFTGFSQPAGFNVSCAINVGDKYLHILGGSRAILVDLTTNSVTSDDTIANRFGISTTAFQSDLDACSHMRLNTNAAPLVYSTAE # PASA_UPDATE: g9420.t1, single gene model update, valid-1, status:[pasa:asmbl_3335,status:3], valid-1 NODE_2039_length_7990_cov_45.2176 . gene 850 4771 . - . ID=g9420;Name=g9420.t1 NODE_2039_length_7990_cov_45.2176 . mRNA 850 4771 . - . ID=g9420.t1;Parent=g9420;Name=g9420.t1 NODE_2039_length_7990_cov_45.2176 . five_prime_UTR 4407 4771 . - . ID=g9420.t1.utr5p1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . exon 4245 4771 . - . ID=g9420.t1.exon1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . CDS 4245 4406 . - 0 ID=cds.g9420.t1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . exon 3711 3962 . - . ID=g9420.t1.exon2;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . CDS 3711 3962 . - 0 ID=cds.g9420.t1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . exon 2918 3511 . - . ID=g9420.t1.exon3;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . CDS 2918 3511 . - 0 ID=cds.g9420.t1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . exon 2567 2684 . - . ID=g9420.t1.exon4;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . CDS 2567 2684 . - 0 ID=cds.g9420.t1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . exon 850 2272 . - . ID=g9420.t1.exon5;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . CDS 1038 2272 . - 2 ID=cds.g9420.t1;Parent=g9420.t1 NODE_2039_length_7990_cov_45.2176 . three_prime_UTR 850 1037 . - . ID=g9420.t1.utr3p1;Parent=g9420.t1 #PROT g9420.t1 g9420 MARISAIRTAFVAALVAILVVSPAVDALECSQCTTDVIDAIVEMRKVLNPLNASIHVVDAKFKPQLASLAVTYNGVKNATSDLNAHLAEVQAAVSDFSTSFAAKVSAKDTEATNGKNVLSAELSTQNGRLTAISGILPGISTNVDYNQDLFGNVLSPMQGSASQFADAASGMEGALGQISGASGTMDTIADAISASMDEADDAIAATADFNTAAVADIVRLEGLSNAVAIDLDVFRNHVKESKAIVLAAVADDRAQITTVEGKLAEAATAVQNKIISSFVGPAGDVDTVVAGTPTATDAAAALGVSMDALNAALASGAPGQIASTTAELKKAIADKILAVHAALQGISTEGDEHISTVLDSLEFASNALEARMVEQMWPDEVQPKADEVFAANSALKLVGNATLTCGRNGPGTALSLNGTDGSYATMPSSFLTGADIAKGITVTAWVKQARNNNGYIFARTNPVGSTRYFALWSEGSRNMIHLFFLPEAAKTGYRQSSINLGNFALDDDTFHHVALVITSFINPYAFLYIDGKLIGRFPNVEAMAAGPTNIPFLIGARQPGGAFVFRGLIDDFRVFRSDLSGSIIRSIFNTPVAVLSAATPFDLLPNGGKRVSFNQTAQTPLIRIAPGTSGFVANVTSLTIAAWVTQKATDEGYIVSKTDSTGSIRPYGLYVSDKSDTILFYYRSAGVATSKFVSISSSIADGKSHHVAVSVSGVSVSFFLDGRLLGTRTLAGRIVDDPTYSIYVGTRGNGGAQMLDGSLANAQIFFNRAMCLTEIQALYKVKPSA* # ORIGINAL: g3891.t1 original gene structure, not modified by PASA NODE_2084_length_7821_cov_39.1794 AUGUSTUS gene 4970 5840 . + . ID=g3891;Name=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS mRNA 4970 5840 . + . ID=g3891.t1;Parent=g3891;Name=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 4970 4992 . + . ID=g3891.t1.exon1;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 4970 4992 . + 0 ID=cds.g3891.t1;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 5130 5320 . + . ID=g3891.t1.exon2;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 5130 5320 . + 1 ID=cds.g3891.t1;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 5463 5596 . + . ID=g3891.t1.exon3;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 5463 5596 . + 2 ID=cds.g3891.t1;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 5787 5840 . + . ID=g3891.t1.exon4;Parent=g3891.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 5787 5840 . + 0 ID=cds.g3891.t1;Parent=g3891.t1 #PROT g3891.t1 g3891 MNWTGGKRSRIGGGNSDKRKQADFFERMRQQKLQTRGGSVVKPHKMPSQLFNTASLDLRALQLLEAAPRTTGLNEATRHPSMIAPPTAIDLGLKLGRHRGAIDIPMSPCEMESRLEGKKNASAYCGGRPNAGT* # ORIGINAL: g3890.t1 original gene structure, not modified by PASA NODE_2084_length_7821_cov_39.1794 AUGUSTUS gene 800 3863 . - . ID=g3890;Name=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS mRNA 800 3863 . - . ID=g3890.t1;Parent=g3890;Name=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 3664 3863 . - . ID=g3890.t1.exon1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 3664 3863 . - 0 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 3148 3535 . - . ID=g3890.t1.exon2;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 3148 3535 . - 1 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 2869 2942 . - . ID=g3890.t1.exon3;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 2869 2942 . - 0 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 2481 2626 . - . ID=g3890.t1.exon4;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 2481 2626 . - 1 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 2003 2223 . - . ID=g3890.t1.exon5;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 2003 2223 . - 2 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 1651 1742 . - . ID=g3890.t1.exon6;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 1651 1742 . - 0 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 1459 1517 . - . ID=g3890.t1.exon7;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 1459 1517 . - 1 ID=cds.g3890.t1;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 800 939 . - . ID=g3890.t1.exon8;Parent=g3890.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 800 939 . - 2 ID=cds.g3890.t1;Parent=g3890.t1 #PROT g3890.t1 g3890 MSGDGGVSEDIPEFLDDSFGGQAADAMENVNGNNILGISERRGSVSTDSPQQRASVFAQFKRSLNRKSQFRTVDDATIIFKVIHRNPFFRKFSAQKLRTIAWTLGHRIAQTGEEIYSERDTTATADWFVIMDGEVTLTMKGNPIATLVPGNSFGEHDLRPSASERRPVTAVAAKFTFMIKLERSEWTILSAPSSAVNEDAMKRSESVDNIGSFVRDALEKPPTKRSAEEMSIIVEVVRGLPAFKGFSATTIEQLCNALVFEEVEKNKTTVFLKGDEGTSWYVIFKGSVKVVVSSAEEFVLSEGKSFGDWALVNDTPRSATVITNEPNCQFLKLDKYDYNRILKSVEQNTVRLSEYGHVVLILENRVAKGEETPRFVVTAGTIDKLYERLFDQTDPTYAEDFLLVYRTFMSNTELIKRLTNSYPPQWPLCLMLPGTVGGR* # ORIGINAL: g3889.t1 original gene structure, not modified by PASA NODE_2084_length_7821_cov_39.1794 AUGUSTUS gene 202 603 . - . ID=g3889;Name=g3889.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS mRNA 202 603 . - . ID=g3889.t1;Parent=g3889;Name=g3889.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 569 603 . - . ID=g3889.t1.exon1;Parent=g3889.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 569 603 . - 0 ID=cds.g3889.t1;Parent=g3889.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS exon 202 284 . - . ID=g3889.t1.exon2;Parent=g3889.t1 NODE_2084_length_7821_cov_39.1794 AUGUSTUS CDS 202 284 . - 1 ID=cds.g3889.t1;Parent=g3889.t1 #PROT g3889.t1 g3889 MDKAVSHDEVGRIANVMSAWLRGYMDYDFDRSPECLEQL # ORIGINAL: g12292.t1 original gene structure, not modified by PASA NODE_3153_length_4171_cov_41.3157 AUGUSTUS gene 939 4094 . + . ID=g12292;Name=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS mRNA 939 4094 . + . ID=g12292.t1;Parent=g12292;Name=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 939 1089 . + . ID=g12292.t1.exon1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 939 1089 . + 0 ID=cds.g12292.t1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 1445 2319 . + . ID=g12292.t1.exon2;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 1445 2319 . + 2 ID=cds.g12292.t1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 2643 2876 . + . ID=g12292.t1.exon3;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 2643 2876 . + 0 ID=cds.g12292.t1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 3285 3361 . + . ID=g12292.t1.exon4;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 3285 3361 . + 0 ID=cds.g12292.t1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 3601 3720 . + . ID=g12292.t1.exon5;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 3601 3720 . + 1 ID=cds.g12292.t1;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS exon 3965 4094 . + . ID=g12292.t1.exon6;Parent=g12292.t1 NODE_3153_length_4171_cov_41.3157 AUGUSTUS CDS 3965 4094 . + 1 ID=cds.g12292.t1;Parent=g12292.t1 #PROT g12292.t1 g12292 MSGQSLAPPSVTPSAAGEPSVGTDGKESKLLSWMRSPTTKRKGLKLKHNELEAVKQSASMDHLNQATAPEEPECDLNKSLNSAMGNGAKQSSLENVFAARQKEKEKEKEKDKKEGGETFRGLIKSIMGKEKKKRDDANATSQNHAEEVVEKRATLTNAVQQSQSAPVVPALHEMRPSSQAQTVSQQPRQRVASGGEMTMSGGQKEKSHVAALRGSQSPAPIRTRLPSGGETSTPSTTTAALATTPPVEEGEFQQLRRAQVGQRPLQQLEQQKQQQQQQQQQQLAATATLSVPTGKGPISAGEEDLARASSAEEEDEWEKSSTHSHASHTSDAGDMDEDGSKKRMFRRMRELLIKVDLAKKKIETEATLRDREAALLEASTKNASLFDLAMQQKFERKIAKLNSVVREYETKLDKYGKQLSELMGKEIDVRGASSDAIRDMCQDSVQNIPKPTKNLIMRQARYFMDKSREVGERLAQKSGSSSSLLGRLGEVGRSEKAEGSSPRASRLLLFQRTPSQEDLIASANVSLV* # PASA_UPDATE: g4231.t1, single gene model update, valid-1, status:[pasa:asmbl_6934,status:12], valid-1 NODE_4084_length_2208_cov_37.4058 . gene 321 2152 . - . ID=g4231;Name=g4231.t1 NODE_4084_length_2208_cov_37.4058 . mRNA 321 2152 . - . ID=g4231.t1;Parent=g4231;Name=g4231.t1 NODE_4084_length_2208_cov_37.4058 . five_prime_UTR 2151 2152 . - . ID=g4231.t1.utr5p1;Parent=g4231.t1 NODE_4084_length_2208_cov_37.4058 . exon 1968 2152 . - . ID=g4231.t1.exon1;Parent=g4231.t1 NODE_4084_length_2208_cov_37.4058 . CDS 1968 2150 . - 0 ID=cds.g4231.t1;Parent=g4231.t1;5_prime_partial=true NODE_4084_length_2208_cov_37.4058 . exon 1600 1677 . - . ID=g4231.t1.exon2;Parent=g4231.t1 NODE_4084_length_2208_cov_37.4058 . CDS 1600 1677 . - 0 ID=cds.g4231.t1;Parent=g4231.t1 NODE_4084_length_2208_cov_37.4058 . exon 321 1301 . - . ID=g4231.t1.exon3;Parent=g4231.t1 NODE_4084_length_2208_cov_37.4058 . CDS 321 1301 . - 0 ID=cds.g4231.t1;Parent=g4231.t1;3_prime_partial=true #PROT g4231.t1 g4231 PPSCILKSLDEECRFPKGTDKTYVEKQHALLATHKYYIKPEARLVGEQFGVRHYAGDVMYQIVGFLDKNKDVQQDQLFDVMSKSRDAFVLDLSKSRIPVVDDGKATQKGGAAAGGKPTVGSIFKSQLTSLVTTLSATTPWYVRCLKPNTQKVPNVFDREMVMAQLRYSGMLDIVRIRKMGYPVKIPLDDFVVKYTAVAPKGFKRTGNNATDTKAIMAPLKLPESEWQIGSSKVFFRQKAFDQIDELRRKLLKEKAIIVQRTWRRYIEQKRYRRIRKAVIYLQGRFRGYFDRLRYKRKLRAIVTIQAHVRGWHARDLAKFLRKKRKEEELKKKQQSQQQTVADEERKARDKAEKELLVMAKMAEAKAQIAAQTSSASVARRPSTDFDFGGLGDFPKSPLNSAGSMDLDNIFSFLK # PASA_UPDATE: g1255.t1, single gene model update, valid-1, status:[pasa:asmbl_51,status:3], valid-1 NODE_1013_length_14683_cov_46.1541 . gene 9120 14023 . - . ID=g1255;Name=g1255.t1 NODE_1013_length_14683_cov_46.1541 . mRNA 9120 14023 . - . ID=g1255.t1;Parent=g1255;Name=g1255.t1 NODE_1013_length_14683_cov_46.1541 . five_prime_UTR 13712 14023 . - . ID=g1255.t1.utr5p1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 13619 14023 . - . ID=g1255.t1.exon1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 13619 13711 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 13343 13465 . - . ID=g1255.t1.exon2;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 13343 13465 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 12966 13091 . - . ID=g1255.t1.exon3;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 12966 13091 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 10654 12642 . - . ID=g1255.t1.exon4;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 10654 12642 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 10009 10188 . - . ID=g1255.t1.exon5;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 10009 10188 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 9737 9826 . - . ID=g1255.t1.exon6;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 9737 9826 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . exon 9120 9417 . - . ID=g1255.t1.exon7;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . CDS 9322 9417 . - 0 ID=cds.g1255.t1;Parent=g1255.t1 NODE_1013_length_14683_cov_46.1541 . three_prime_UTR 9120 9321 . - . ID=g1255.t1.utr3p1;Parent=g1255.t1 #PROT g1255.t1 g1255 MIFPHLNGGKPLCGDKFVVKDGRLTNAPVVKSKEYAKELFGLSMFKIRPLPAKSRGGHAYSRLATELLPLVEENEVFSVHLAFRIDSTYRHAGIFLLKARTCAIARDLATAFSETHEEPRGSFILPVLPPTVDPLCLPNRLSSAGIVDIKCLPNLVCAPPCTHAHCSAGTPDHDACMRHISDGELSDHHVAEPGFALADLNMQPAHSSGNHDEACAHGLPRQHHQQQQHQHRQNQQQHQLQQLSQQSEHDGRAQPTSQCTDRRSSAAARECSVSFKFQSKYLSVSEIESRPPTPPSRASSVQPRPWCNCDICATSQCGRGRDVTSGDDVSATSSGDRSSSDFDAVELETNERGELEEVRLLCERPRLSVMGMAKYRKSGVALARHKLFVVSGDGKVLVKIAFSVGIVASGICWSEIYARMGVSPELCTLLMRSETAALVAVGQAGDRCGGGNDVGNQHLAWKTSLAQLLRVRDRREVDPFRPLVHAQTRLLQHLAGISSFKSEVRTKASLSRSVGINGSSWRRRSVESAVAGAVRKLLSGASGAESIAAVDDGEYSSEEEVIERPGKFVVGVMRNGLALEDVFYLSAEDNTPIAYRVCYCPGSSGSAHAAKAAVEGRLLGAHAVANVVWVVGPLLNSHKVSLAIAVNLATMGNVNVFVVDQRGHGMSHGVRGGAPHVNTGLRDVRAMVRHVRMNYCRTPIILAGHGMGATQVLNYAVWKKRVPVDGYAFFAPTFYSMLRREVRRDFLQHTDSWYVKRCLLARLSGGYFGNGPAIHTEVLFDNVCIISPEAEASFVREFAEKNDPPRGTAIPKTLSVNQMAGVVQTRRTNDLFTGVDKPFGLWYGSLHELFDPKDIVAAADRSRVSNKYVDVIDGIAYVELLWMAPELLTSWLRSCLSQ* # PASA_UPDATE: g1254.t1, single gene model update, valid-1, status:[pasa:asmbl_52,status:12], valid-1 NODE_1013_length_14683_cov_46.1541 . gene 1066 8697 . + . ID=g1254;Name=g1254.t1 NODE_1013_length_14683_cov_46.1541 . mRNA 1066 8697 . + . ID=g1254.t1;Parent=g1254;Name=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 1066 1136 . + . ID=g1254.t1.exon1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 1066 1136 . + 0 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 1580 1745 . + . ID=g1254.t1.exon2;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 1580 1745 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 2529 2644 . + . ID=g1254.t1.exon3;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 2529 2644 . + 0 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 2795 3067 . + . ID=g1254.t1.exon4;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 2795 3067 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 3291 3455 . + . ID=g1254.t1.exon5;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 3291 3455 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 3650 3742 . + . ID=g1254.t1.exon6;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 3650 3742 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 3864 4661 . + . ID=g1254.t1.exon7;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 3864 4661 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 4759 5419 . + . ID=g1254.t1.exon8;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 4759 5419 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 5637 6526 . + . ID=g1254.t1.exon9;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 5637 6526 . + 0 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . exon 6725 8697 . + . ID=g1254.t1.exon10;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . CDS 6725 8624 . + 1 ID=cds.g1254.t1;Parent=g1254.t1 NODE_1013_length_14683_cov_46.1541 . three_prime_UTR 8625 8697 . + . ID=g1254.t1.utr3p1;Parent=g1254.t1 #PROT g1254.t1 g1254 MSGGLQNKDKEPPELEVSPDGVDRIRDALDVLRLYKTSKCPSAACRQRWDTRECEFYHNENERRRNPFLDNEDFKPGKKVPLRYKRFVCPDADDCPRGDECKFAHSTMEQQFHPRIYRSRECKKGATCGFRFCAFSHRISGSNMPGPNLVHIQAAPPDVLRRMTGSGATGDPSYAILHSSLTGSPASASSGFAPTEGLLPLSLAGGAASRPFNAVVGSKMHSKTVLSGQVRLTIYEGMCRECLNQAGRIVALTKVAPGVTPSCRYCASITPVRIASINGTTFVPIRPMPRAPSRRGAFRECHYLVDTGNCPDGDRCTFAHGTEECMAWNEEARILWDAELSAPSYNRHIPPSAISSGQLDNATAPSAQSSLAGYVPAYGSQSLASSSSCAVGIRRFSDTATLPDEGRIAFETSAITVGPQSTDGVGTAAESTLPPTHAVPQQHAKEECWPSKTRWRLVPIPVQSGHEAEPSSPVSKTMPNSSMASAAAGCAIYSPSADEARERLWTDLPNTMASLFSHLANSKGTPQSRCCPTSVAKDNYAVVMQQLLVLEERAENVALRRISMQDASISCLPTPVGTTSVAWSEYAIVPPSSLYIPAGQLSCGHRVRVILSNWDRNDAQPVNVYEGRVTLVEFDPTVGFATRICVRMSSAAALELDRLGGSVRGCHAKFGADSDLYRLMHTCVERVARRSPGLVFPERPRGALMHARIPRQLLVALHRCEGPSATATAAKSLSEEARDGPGGTMFVPDDEELSVFARMLEMPWLYPGAPVLVTGPSGSGKTTTLRELAVHVAFDDPSSARRVLICAATESDADEHTLAIAQRVGSLTTVSRGAALDHGGILRLYGEHTSCCDVRLSRLSNGACGAGPLSPSPLADVDSVAWTHFPPPTLERLRRARIIITTPKSAATALCCVGGLPDYFFSHVILDNASRLTEPLALVPLSLAGGDTRVMLVGDRCDFGPVVYSRLSAAAGLKTSMLKRLAAHDAYSDAGGLSACRIQLRHCYVGHPDITNMCAKAVVDSPDIVTVIPPKSETACGVSIGQVLDNSLLSRTVAVIVDPNFHAEIGGGSELCSAPEASACALLALWLVQAAGVAPNRIAIVSPFTMQRQIICDMLSEGQCAGVLDSVKVLPPQAVWASHFPLDCVIVSCVVSSVDVALETAHFAEQDVADDVSPTHAFSDHSLSGIGGFNGAFLTDIRAACSVMGRARQLAVIVGSPSLLAPQIESVGGTSSAASSAEDEKRRPNPWKELIVAANARRSCFDGMTFTDGSRSSSISEALRTRIFGPQSAFPLLPCSLSLSDSGHVAKAGGVWGHGGFDSSAPSSTGTSPSVYPFSPAQVKHPVVMPLSPSSHTSPDMHNSHGSPFYDEGMDSVATAIGAGIDALIASRRNTPSPDLTRTRQPIEGPMLMSASRESGSRGDIGRLASGLPGGHGERVSVSTSPHVHGAITSPHQRQQCFQLASLDSGLGAQLLPPPGLTSPPDSSAGTWPSSVGLGGYSSDDVVQEAPRMLSRLRAAVEGYLLWHHRAVSHFSQDRNTTYDDLFKPVNALTLSLETVLRNTDRAIGELALISQSTWSASAPPDLGFVRRVGETRVRCYSDSNQEPKSPLQHWQQEQQGRHQHGQSYYGPASEQALPGQQSHELTLHSDGAHADRKGTEDTFATYEGDQVRALVADHAGIETQYTLHDYLVSAASDGSILSGLRQWPTSPMH* # ORIGINAL: g10365.t1 original gene structure, not modified by PASA NODE_3006_length_4546_cov_33.1411 AUGUSTUS gene 2277 4450 . + . ID=g10365;Name=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS mRNA 2277 4450 . + . ID=g10365.t1;Parent=g10365;Name=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS exon 2277 2774 . + . ID=g10365.t1.exon1;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS CDS 2277 2774 . + 0 ID=cds.g10365.t1;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS exon 3008 3314 . + . ID=g10365.t1.exon2;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS CDS 3008 3314 . + 0 ID=cds.g10365.t1;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS exon 3554 3928 . + . ID=g10365.t1.exon3;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS CDS 3554 3928 . + 2 ID=cds.g10365.t1;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS exon 4269 4450 . + . ID=g10365.t1.exon4;Parent=g10365.t1 NODE_3006_length_4546_cov_33.1411 AUGUSTUS CDS 4269 4450 . + 2 ID=cds.g10365.t1;Parent=g10365.t1 #PROT g10365.t1 g10365 MCYFFGKIIWNKIKEARAAKADGAANPSGNACTTDSAAISAGANAPVRYGSISEVVVDSSKLSNNGQSAAQKGQDAETAIKYTTSLLVVMMAGFALAFDYSVGLISIESYWHIVAPDLPSLYGFAFGCYDLALFLMCPFIGVLSDRIGIKRCLMLAITLNMAGNIMYSLAYISGGSVALSTSVEKVGKWEMLLFGRFIAGTGASAIGLGVVYITKTTTVAQRPVVVGVYSVSQTLARVVGPCVVIPLAQMDMSITTTAEKLFNFYTIPGWIAVGIAAIALAGVVLFFEEPTNGTCSTLETGGADAKTYSDSDASFSLLRAFTESKPVVMMTWDLLVADAFACFCIYSVMANLYTFGLGEYRIIQQSSDLGMLYYGVAAAVLPATVWWRVALKYGVQDYQIMQIGMCTIAAGILLLVDYTGNQSRYKMLYYFGTGITLVGMSAYLSMMQSFYTKK # PASA_UPDATE: g10364.t1, single gene model update, valid-1, status:[pasa:asmbl_5407,status:12], valid-1 NODE_3006_length_4546_cov_33.1411 . gene 126 1390 . + . ID=g10364;Name=g10364.t1 NODE_3006_length_4546_cov_33.1411 . mRNA 126 1390 . + . ID=g10364.t1;Parent=g10364;Name=g10364.t1 NODE_3006_length_4546_cov_33.1411 . exon 126 335 . + . ID=g10364.t1.exon1;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . CDS 126 335 . + 0 ID=cds.g10364.t1;Parent=g10364.t1;5_prime_partial=true NODE_3006_length_4546_cov_33.1411 . exon 585 676 . + . ID=g10364.t1.exon2;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . CDS 585 676 . + 0 ID=cds.g10364.t1;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . exon 883 994 . + . ID=g10364.t1.exon3;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . CDS 883 994 . + 1 ID=cds.g10364.t1;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . exon 1277 1390 . + . ID=g10364.t1.exon4;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . CDS 1277 1372 . + 0 ID=cds.g10364.t1;Parent=g10364.t1 NODE_3006_length_4546_cov_33.1411 . three_prime_UTR 1373 1390 . + . ID=g10364.t1.utr3p1;Parent=g10364.t1 #PROT g10364.t1 g10364 DVPIIDTDSWSSLVAPEAASDDAMQLDATPGNAMSSEAQAKGEITDASVPPEGSELFAQFRARAEQNVERERALREQEERFQRDRERRAREQKDDEERRARAAEEAERQRRDQELQKKESASRDLASTRETERLDRQAMRPCIDLTSQSALMSAFEKLTKVTLFSSTLR* # ORIGINAL: g5884.t1 original gene structure, not modified by PASA NODE_1452_length_11202_cov_41.1507 AUGUSTUS gene 8839 9675 . - . ID=g5884;Name=g5884.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS mRNA 8839 9675 . - . ID=g5884.t1;Parent=g5884;Name=g5884.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 8839 9675 . - . ID=g5884.t1.exon1;Parent=g5884.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 8839 9675 . - 0 ID=cds.g5884.t1;Parent=g5884.t1 #PROT g5884.t1 g5884 MASIAISAGIQIALAGAKSAKSAKANQDKSGQLGVRLETAAELLTVLKNTYGENIPASLQEDILGICACIKEVNEYVQACDDENGFTAFFKANSHERQFYELDKKATLLISNLTVHCLEIAVALPPQKPTYATNALLAPHGIDTFGNKTEPLVSIANYEPAHTAPAPAAYTVNNSATTVAAYPPQQYPPQQQQQYGGQSLQQPGSKSPSARSPATSPQPARTTPGIAAIAGPAVPGKPVTDQQQTKKRLPAKIVGRLAGRAEKIAGRFGYHPDKEEKE* # ORIGINAL: g5883.t1 original gene structure, not modified by PASA NODE_1452_length_11202_cov_41.1507 AUGUSTUS gene 5786 8444 . - . ID=g5883;Name=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS mRNA 5786 8444 . - . ID=g5883.t1;Parent=g5883;Name=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 8223 8444 . - . ID=g5883.t1.exon1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 8223 8444 . - 0 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 7901 8142 . - . ID=g5883.t1.exon2;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 7901 8142 . - 0 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 7229 7705 . - . ID=g5883.t1.exon3;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 7229 7705 . - 1 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 6926 7070 . - . ID=g5883.t1.exon4;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 6926 7070 . - 1 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 6717 6805 . - . ID=g5883.t1.exon5;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 6717 6805 . - 0 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 6527 6595 . - . ID=g5883.t1.exon6;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 6527 6595 . - 1 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 6242 6373 . - . ID=g5883.t1.exon7;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 6242 6373 . - 1 ID=cds.g5883.t1;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 5786 5921 . - . ID=g5883.t1.exon8;Parent=g5883.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 5786 5921 . - 1 ID=cds.g5883.t1;Parent=g5883.t1 #PROT g5883.t1 g5883 MSGLEREKSVVGTATTHVNFMCQRCAQPLQKGTWVSDLVPETFDALTAPLSFSGTAETTGLPAHRHAETLDSGLQGIHHVSETRQDNITAAVAQAMSSSAPVARKTIHGRAQMGPPAYPPPRGSTAQKGLESFVVLSRSQVGRQTSQSGEGESSSPGPQSPIAELINKDSITYRIKVANRLFDLMSGISEADHPLCTECADLLLAELEQQIADVMDDREYYKKYLEKVSLTSGEAALGGASQSLERAEKSALEREEERLRAELLKIEQERESIARETTALSRERERLDELESEYWREANEYQRQLQEYVDERDSVEVRYQHASQQLDKLKRTNVYNDAFHIYHDGHFGTINNFRLGRLTQVPVDWSEVNAAWGQTVLLLHTMTERMGFKFKRYRLVPLGSFSRLERLEDNMQLELYGSGGLKYFLTNRFDTAMVAFLDCLQQFKEYIESRDPHFKLPYQIVKDKIGDLTIKLQFNNDETWTKALKYMLTNLKWCLAWVCKMAR* # PASA_UPDATE: g5885.t1, single gene model update, valid-1, status:[pasa:asmbl_1646,status:12],[pasa:asmbl_1647,status:12], valid-1 NODE_1452_length_11202_cov_41.1507 . gene 10015 11124 . + . ID=g5885;Name=g5885.t1 NODE_1452_length_11202_cov_41.1507 . mRNA 10015 11124 . + . ID=g5885.t1;Parent=g5885;Name=g5885.t1 NODE_1452_length_11202_cov_41.1507 . five_prime_UTR 10015 10221 . + . ID=g5885.t1.utr5p1;Parent=g5885.t1 NODE_1452_length_11202_cov_41.1507 . exon 10015 11124 . + . ID=g5885.t1.exon1;Parent=g5885.t1 NODE_1452_length_11202_cov_41.1507 . CDS 10222 10881 . + 0 ID=cds.g5885.t1;Parent=g5885.t1 NODE_1452_length_11202_cov_41.1507 . three_prime_UTR 10882 11124 . + . ID=g5885.t1.utr3p1;Parent=g5885.t1 #PROT g5885.t1 g5885 MALMGVMVAIKVAKAGVTLKNTSKANEESVVRLSARIQSISALIEGISHKYDNDEALPEVIKQALAELGIVIGDCNAYIEACSNDGSSSAFFKAKSRETMFYELDRRLTDSTAKLVVHCLANNIRPVISEEHLVAPAQAPQRPPSPQRSPNQTRRDPNEQYAAQQAYMQQQYMQQQYAQQQQQQQYMQQQQYMQQQAYGQQQAYGQQQAYGQQPPAYYQ* # ORIGINAL: g5881.t1 original gene structure, not modified by PASA NODE_1452_length_11202_cov_41.1507 AUGUSTUS gene 324 2678 . + . ID=g5881;Name=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS mRNA 324 2678 . + . ID=g5881.t1;Parent=g5881;Name=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 324 1872 . + . ID=g5881.t1.exon1;Parent=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 324 1872 . + 0 ID=cds.g5881.t1;Parent=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 1976 2116 . + . ID=g5881.t1.exon2;Parent=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 1976 2116 . + 2 ID=cds.g5881.t1;Parent=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 2362 2678 . + . ID=g5881.t1.exon3;Parent=g5881.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 2362 2678 . + 2 ID=cds.g5881.t1;Parent=g5881.t1 #PROT g5881.t1 g5881 MLSVTEMAVTPIKAVDGRSPRKLSVASHSQQHDACISPTVTVDATGIRSPLPKVCFVEDALSPSPSAASYNGLVMSPSEQSPTSINDGRDAVSYGSPSPQRQSDRRFTRGNSVDSSVHTSDIDAVVRRLSIEGASVDASEVDAEACDTTFESDCTDGDLDATDMCVADDDVAPLVGAHDFVMLKQISRGAFGHVHLARRKGGDHAGQLYAIKIMRKDDMIRRNMVAHVLAERNALALTTNPFVVRLFYSFQTRSQLYLVMEYVPGGDLAALLSAVGCFEAQMACTYAAEIIEALAYLHSHGIVHRDLKPENVLISRSGHLKLTDFGLSKIGRWFPAGMAGAWTGEGAGLSGCGSGSGGGMLGLPPRTPGWKLMRTPGQMRSLTSEFFTMPGAEDPSVPYTPRTPGCALEPPPSRVRLPPSAPPEVAAVTRASSLLSVPDSSLPSPATSSASSVPVLCASGATPSNSTACLPRTPVQLVAMTPRTPCMASAQPKRRTAHVLGTPDYIAPELLAGKGDVPVNAAPFSGPAADWWALGVCLYEFLTGVPPFNADTAEEVFDNIRHRRLEWPDIPEFMSFEAAALINSLLAMDPADRPTAEDLRRPCASECGESRGTCGSPQPLPDSSRGPFAFFANTKWDALISQTAPFVPQTEDELDTSYFERALRLYSP* # ORIGINAL: g5882.t1 original gene structure, not modified by PASA NODE_1452_length_11202_cov_41.1507 AUGUSTUS gene 2820 4966 . - . ID=g5882;Name=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS mRNA 2820 4966 . - . ID=g5882.t1;Parent=g5882;Name=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 4799 4966 . - . ID=g5882.t1.exon1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 4799 4966 . - 0 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 4107 4291 . - . ID=g5882.t1.exon2;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 4107 4291 . - 0 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 3755 3866 . - . ID=g5882.t1.exon3;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 3755 3866 . - 1 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 3478 3600 . - . ID=g5882.t1.exon4;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 3478 3600 . - 0 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 3262 3326 . - . ID=g5882.t1.exon5;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 3262 3326 . - 0 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 2972 3116 . - . ID=g5882.t1.exon6;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 2972 3116 . - 1 ID=cds.g5882.t1;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS exon 2820 2870 . - . ID=g5882.t1.exon7;Parent=g5882.t1 NODE_1452_length_11202_cov_41.1507 AUGUSTUS CDS 2820 2870 . - 0 ID=cds.g5882.t1;Parent=g5882.t1 #PROT g5882.t1 g5882 MPIQVLTARLDSARKFANILKAIHFKDVALCTISATGIRFTVEDQSKSVQAHALLQAGLFQLYSFQGEGISFNINIGILLECLSIFGTASASSAASAPGNSTALRVCYDGFGSPLVLVLEEHGIVTDCEIRTLEPEETTDFRFIAADTMCKIIIQSEALKEAFSELDMSSDVLQLMVSPDKPHLRLSTYGAGAHVHVDYQRDSDVIELFECTQIQINRYRLTLLQPCVRALAISSKTSLRTNARGFLSMRYMMDMDDGQISFVEYLCAPEVTNDDNEGQVSQ* # ORIGINAL: g335.t1 original gene structure, not modified by PASA NODE_3484_length_3364_cov_40.1274 AUGUSTUS gene 2 3364 . + . ID=g335;Name=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS mRNA 2 3364 . + . ID=g335.t1;Parent=g335;Name=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS exon 2 96 . + . ID=g335.t1.exon1;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS CDS 2 96 . + 0 ID=cds.g335.t1;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS exon 256 564 . + . ID=g335.t1.exon2;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS CDS 256 564 . + 1 ID=cds.g335.t1;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS exon 783 944 . + . ID=g335.t1.exon3;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS CDS 783 944 . + 1 ID=cds.g335.t1;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS exon 1081 1569 . + . ID=g335.t1.exon4;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS CDS 1081 1569 . + 1 ID=cds.g335.t1;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS exon 1742 3364 . + . ID=g335.t1.exon5;Parent=g335.t1 NODE_3484_length_3364_cov_40.1274 AUGUSTUS CDS 1742 3364 . + 1 ID=cds.g335.t1;Parent=g335.t1 #PROT g335.t1 g335 RGATASIYLPNGDAQAAAGVRIVDALGRMDAGLPADAKAGLESWIASYNGPTLGGILEALGVSAGVSITGATGFVGSIGALIPVNMEVALDESSGLSVRRFSAGLLSKTPVSVGSSLSIDKFGVAVDVDRVGTTWTAAGFIRGVVQIASFPVGIYVPFGQAAKSSNAYIRFPKVLIGGVPAQAVYGLDGSYSFSPKPTGVTLGNLASVLPGLSDIYDSTTKKLKISIPGLDAAVAVLANLVVVDFDFVLSEAGTGTLFPAIRSFRATLVSADPLLIYSGLSLDSYVVEFAMDSGLGPRRFSGRFKGTVRVGSKNFQIGVTVPFGLTGERATISFPGTSVQGYPLDAFFGGSWTLPNMQLTSDRVRVADLITVIPGIDTVFARVKSSLPNFGDALDALVVTNISVEFGTAFLGLRALSITVVSPSVWRITSSVSIGPFALDVAYSGAGNSSALSAVVRGTATISGKSVGIVVPFNKPGRSVQLILPRLSVGSMDISDIFPGANAQVDGSGSPVTVDVSATSLATVAGNFKAKTTSTLVELVGRVNAASSSILTLGGVLDSFGFAGISRSSVSSSISGLPNFASIGVTNFSLDARTLATDGLAGIVAARATVVLTTSWVITSDIKIDLLSVAFGMSRVTGTTSWKFTALASGYLVIGQLVCGARIPINIPTERVRFYLPEVRIRGANIISSYGLDIPTSDVSKTIIANVASSAINASYAFARDAGQAIQSGAISARTAIRARLRGLVQSAAYSVSDETRLIQESVQQAKTLGLTLGVLIDALHIPSITSASLDPKLAGLPNLAEFGIAALAADALRSDASTKLMEGTRSFDACVFYASDWVLVGTLKISSLAMQISANIRNGFLSFRASLSGRLTFQGVSFAAYIPINIPGEQM # ORIGINAL: g7225.t1 original gene structure, not modified by PASA NODE_2579_length_5802_cov_35.65 AUGUSTUS gene 197 3633 . + . ID=g7225;Name=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS mRNA 197 3633 . + . ID=g7225.t1;Parent=g7225;Name=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 197 409 . + . ID=g7225.t1.exon1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 197 409 . + 0 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 562 1071 . + . ID=g7225.t1.exon2;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 562 1071 . + 0 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 1376 1560 . + . ID=g7225.t1.exon3;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 1376 1560 . + 0 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 1880 2076 . + . ID=g7225.t1.exon4;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 1880 2076 . + 1 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 2226 2284 . + . ID=g7225.t1.exon5;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 2226 2284 . + 2 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 2442 2820 . + . ID=g7225.t1.exon6;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 2442 2820 . + 0 ID=cds.g7225.t1;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 3077 3633 . + . ID=g7225.t1.exon7;Parent=g7225.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 3077 3633 . + 2 ID=cds.g7225.t1;Parent=g7225.t1 #PROT g7225.t1 g7225 DLQWDVLAGLTVGFMVIPQSLAYARTAHLPPQYGLYSSFIGLFVYFMFGSSKDVSVGPTTITSLLVASMATRLADGSADPAAAVRLAMVTGCIQIVLSLFGAGSYVHLIARPVSLGFTCSAAVSVMAGQAPSLLGVTHSVREEFYYKVYDTLRNLGSASGSDAALGLCSLTFLLGVKWVTGVRPLKGTWQGRLLNAGKSALVLVASLCIVYVSSAKFRLIGPMPSGVPSPRAPQFDGIDWQDLLITGCLSALITFMESYSIATLFARHGGYEVAAGQELLALGLANFFGCFFSSYVVTGSFSRTAVNAQAGVRSQGAGLLTAVMVILSLEYLIRVFEHVPVASLASIIVVAVIPTLELGHAWRLWRICKSDFLAWFVTFWCCLLISVPVGVIGGFACSVLVLLVRMSGGYSATLRPPSALTDLPHTAGDAVAADLLSHSPMDGNVLLDLVPTRGMRHSHGGSANDVDETWTVAVVRVDGPLVFSSAAHVTLSAARRALEGARIIVRVTPTVVEIVDLIEVPAAAEMEIKHPDVIVFDLSRVDLIDSCGVDSIADAAHWFETKSGARCAVACPSPEVRDMLQKGGFGSALRAMRRGATLPLPSDFEEARHVAAARAPVAGTVLGALAGMASVSADEISLEDGEVCVHAGVDGDGANSAGRAHVDASIDEDDASDDGDDKPDGGMRQPLLVGDVRVGRRRL* # ORIGINAL: g7226.t1 original gene structure, not modified by PASA NODE_2579_length_5802_cov_35.65 AUGUSTUS gene 4218 5436 . - . ID=g7226;Name=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS mRNA 4218 5436 . - . ID=g7226.t1;Parent=g7226;Name=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 5416 5436 . - . ID=g7226.t1.exon1;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 5416 5436 . - 0 ID=cds.g7226.t1;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 4991 5092 . - . ID=g7226.t1.exon2;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 4991 5092 . - 0 ID=cds.g7226.t1;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 4557 4750 . - . ID=g7226.t1.exon3;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 4557 4750 . - 0 ID=cds.g7226.t1;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS exon 4218 4290 . - . ID=g7226.t1.exon4;Parent=g7226.t1 NODE_2579_length_5802_cov_35.65 AUGUSTUS CDS 4218 4290 . - 1 ID=cds.g7226.t1;Parent=g7226.t1 #PROT g7226.t1 g7226 MMSRVNKVIIGTHAVMADGGLMSINGTHSLALAAKHHSVPVVVLSAMFKLSPQYLCSYDQDTFNNLVSPCDVLKFREGDVVGSVNIQNPIFDYVPPDLVTLFISNIGSNAPSYVYRLLSEYYHPDDYEI* # PASA_UPDATE: g7478.t1, single gene model update, valid-1, status:[pasa:asmbl_3289,status:12],[pasa:asmbl_3290,status:12], valid-1 NODE_2020_length_8067_cov_52.384 . gene 99 3766 . - . ID=g7478;Name=g7478.t1 NODE_2020_length_8067_cov_52.384 . mRNA 99 3766 . - . ID=g7478.t1;Parent=g7478;Name=g7478.t1 NODE_2020_length_8067_cov_52.384 . five_prime_UTR 3693 3766 . - . ID=g7478.t1.utr5p1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 3506 3766 . - . ID=g7478.t1.exon1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 3506 3692 . - 0 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 3206 3414 . - . ID=g7478.t1.exon2;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 3206 3414 . - 2 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 3015 3088 . - . ID=g7478.t1.exon3;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 3015 3088 . - 0 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 2371 2864 . - . ID=g7478.t1.exon4;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 2371 2864 . - 1 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 1250 2154 . - . ID=g7478.t1.exon5;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 1250 2154 . - 2 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 932 1058 . - . ID=g7478.t1.exon6;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 932 1058 . - 0 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 495 752 . - . ID=g7478.t1.exon7;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 495 752 . - 2 ID=cds.g7478.t1;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . exon 99 382 . - . ID=g7478.t1.exon8;Parent=g7478.t1 NODE_2020_length_8067_cov_52.384 . CDS 99 382 . - 2 ID=cds.g7478.t1;Parent=g7478.t1;3_prime_partial=true #PROT g7478.t1 g7478 MDEEPLLGARTFCAASHPSDKCGSNGLPLTPNGIRICGRFQRLTTLKHSALCEYVAIVRGRHERLFVVTEHHARSLNDALVPEDALISLASAATENSLSRLAANLLGALSYLNDNGVVHRNLSPSNILFDPVGNIKLSDYGLCYMTNGGSEVEFPIGNPRYIAPELLCLPPVLPAREVHPCPRADVWSLGVILLEQLVGLRAWMRFGEDVDAVLQRVRAAWELATPRAPVTRDAGDSLIDFGESRECDTSAYDGVTAATADATNALEFLLAEFRSDAALHTMSPQFVSFLSQCLRVSPSGRPTPCQLLSHPFIVAHRTNADVPSTVSWTPSASNSRPFAVGGGLSASDGRGGGDPLLGRSLAEIYHLWTLAGGDVAAEMTRRGLVQSRPPVLHIPILARVDGSTHGGTRDRTQMYDPAVLTLSLRQVRDRLQSAAAALDLSPSYGDYERALAECGDDRPPAKGEFVAPPTIHSGRSSDVHLPDAEGSLDNHAHFHLREAITSPITSATVAADIDNAANGNFSEISVGSSLGNNTDLAAATRAPLLPLPIRERDIEYQMQRLSLFNRLLECYPHSRRRVCVEAAVDIPPHLRGRLWGAILGVRGDYVAEYIACDKESETPTDRQIDVDIPRCHQYEQLLASPEGHAKFRRILKAWVQSNPELAYWQGLDSLCAPFLALNFNDEARAYACLSVFVRRYLPGFFAHDNSATIQDYLASFRHLLAFGDPELAAHLDEIGFLPELYAIPWFLTMYTHVFPLSKIYHLWDSLLLGPPSFPLCIGASILRQLRESLLSYQFNECILMFSDMPDINIERCTRDAFRLSAETPPSITRRPKHDEGRGADQDGRST # ORIGINAL: g7479.t1 original gene structure, not modified by PASA NODE_2020_length_8067_cov_52.384 AUGUSTUS gene 4007 6157 . - . ID=g7479;Name=g7479.t1 NODE_2020_length_8067_cov_52.384 AUGUSTUS mRNA 4007 6157 . - . ID=g7479.t1;Parent=g7479;Name=g7479.t1 NODE_2020_length_8067_cov_52.384 AUGUSTUS exon 4007 6157 . - . ID=g7479.t1.exon1;Parent=g7479.t1 NODE_2020_length_8067_cov_52.384 AUGUSTUS CDS 4007 6157 . - 0 ID=cds.g7479.t1;Parent=g7479.t1 #PROT g7479.t1 g7479 MPVTAQRRVFGRPVEDFLDECGYLVGDRLADHYSRLACLRRAFAAWKGRLGASSKSRPLRRGVTGYQCGREGPGDSRARDDDSGHDDDDRRGGIRPSDLAERWYVRRLQQRCFSTWSVRVALLRKQADTFICKRNERSCYNVLRVLHLTCLLREHSEKRNKEVLVDALSAWRRAFAFRAVGRARDRCALRHALLTWHAEARKGSEAVVLRAAVSQANARRLMYAWLSVARQRSRLRHLHSVASEHLRLTLICRALSALATNVAQKKRRREMAALARGFRLRNIFCAFVISRASRVLPRLIEAQETSSQISFHRSGQHLPDEDRESPLLLVDEWEEAPAAWEASLKECPSSSCGQREGDPPNASVERTESLPHVSVDVNESTDREENPPEASRGSAPSSDGVGGASLSSVEMATRPLSHERVRNTRQPLPRPVCFWISASDQTSDNPAPVSAMLVSSGGPCAAPISSVAVTRLATLPSQAGGACADVVRAQAWESQLRPCACSNLNCKGCAKNMLTSAPQKLVSGAPRPPDNVRQRTTDRSVAEVAKRPVKTPVRAHVARGDDAATQGSYLARMLALKELAAKATTTSKPFALTTLRRGDIRPPPSAFLPSANNGANFPGPSAWTPKSTPNHITARAWPRRLSLRSAATPSVPSPTPATSAAVVANAKSQTAQTAPVNTQPAAVALVKSALKSSARLDPHVKQRQRKSVSFGVELCV* # PASA_UPDATE: g7480.t1, single gene model update, valid-1, status:[pasa:asmbl_3291,status:12], valid-1 NODE_2020_length_8067_cov_52.384 . gene 6505 8026 . + . ID=g7480;Name=g7480.t1 NODE_2020_length_8067_cov_52.384 . mRNA 6505 8026 . + . ID=g7480.t1;Parent=g7480;Name=g7480.t1 NODE_2020_length_8067_cov_52.384 . five_prime_UTR 6505 6626 . + . ID=g7480.t1.utr5p1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 6505 6716 . + . ID=g7480.t1.exon1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 6627 6716 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 6836 6895 . + . ID=g7480.t1.exon2;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 6836 6895 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 7026 7154 . + . ID=g7480.t1.exon3;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 7026 7154 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 7249 7356 . + . ID=g7480.t1.exon4;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 7249 7356 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 7467 7571 . + . ID=g7480.t1.exon5;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 7467 7571 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . exon 7682 8026 . + . ID=g7480.t1.exon6;Parent=g7480.t1 NODE_2020_length_8067_cov_52.384 . CDS 7682 8026 . + 0 ID=cds.g7480.t1;Parent=g7480.t1 #PROT g7480.t1 g7480 MADEERVMKIEHDYSADVDVKLPEAEGLAKAGRVPEAIEFLLPLEKQARTASDFHSTARILVAILRMCYAAKNYKLLNEQIIFLSKRRGQLKQAVQKMVQEACLYVEEISDLPIKMELIDTLRTVTAGKIHVENERARLTMTLAYIKEGQNKIAEAAEILQELQVETFGSMDRREKVDFILEQMRLCLAKRDLVRTQIISKKISSRFFENSENQDLKLKYLRLMIQLGEEEFSYLPTFKYYKSIFETPSVLESEPQWTEVREFGGDVYWARMHPHMRG* # PASA_UPDATE: g2223.t1, single gene model update, valid-1, status:[pasa:asmbl_6098,status:12], valid-1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . gene 2955 3317 . - . ID=g2223;Name=g2223.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . mRNA 2955 3317 . - . ID=g2223.t1;Parent=g2223;Name=g2223.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 2955 3317 . - . ID=g2223.t1.exon1;Parent=g2223.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 2976 3317 . - 0 ID=cds.g2223.t1;Parent=g2223.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . three_prime_UTR 2955 2975 . - . ID=g2223.t1.utr3p1;Parent=g2223.t1 #PROT g2223.t1 g2223 MLRAGIAMRSICQVLVVDGGGATTHALVGDMLAELAANNGWSGIVVNGCIRDSAAVQLCPIGVKAIGTHPKKTAKRNLGQSNLTVSFGGVEFVPGHYLYADADGIIVSPSPLK* # PASA_UPDATE: g2222.t1, single gene model update, valid-1, status:[pasa:asmbl_6097,status:12], valid-1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . gene 365 2627 . - . ID=g2222;Name=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . mRNA 365 2627 . - . ID=g2222.t1;Parent=g2222;Name=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . five_prime_UTR 2559 2627 . - . ID=g2222.t1.utr5p1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 2357 2627 . - . ID=g2222.t1.exon1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 2357 2558 . - 0 ID=cds.g2222.t1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 2080 2218 . - . ID=g2222.t1.exon2;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 2080 2218 . - 2 ID=cds.g2222.t1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 1459 1551 . - . ID=g2222.t1.exon3;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 1459 1551 . - 1 ID=cds.g2222.t1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 710 1043 . - . ID=g2222.t1.exon4;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 710 1043 . - 1 ID=cds.g2222.t1;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . exon 365 455 . - . ID=g2222.t1.exon5;Parent=g2222.t1 NODE_3469_length_3403_cov_33.5679_potentialcontaminant . CDS 365 455 . - 0 ID=cds.g2222.t1;Parent=g2222.t1;3_prime_partial=true #PROT g2222.t1 g2222 MGKATIFAVLVAVTAAGIFYHHRTYIDDPIDWKAEIAIGGSNVKFSRNTNGVMEMWGHGDLGFARAIGYAHAKDRLVQMVLQRTISEGRLSELLVTNAKAVSVDYYFRNLGIRRAVRNSNIPRSTREYLDAYAEGVNQRMAEVGRPLEFLLVGLEPAPWSYEDSLATMVLMSYAGLGEFHGDVEKIVTMAVQDGTEEQIASIKKLFSPHLDALDDDIIDVLRSVTLEIPVVPDEVRFNPYVSPATASNNWVVSGAKSKTGGALACNDPHLEISRLPAVWYEFIYHD # ORIGINAL: g7817.t1 original gene structure, not modified by PASA NODE_2393_length_6433_cov_35.0637 AUGUSTUS gene 3441 6178 . + . ID=g7817;Name=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS mRNA 3441 6178 . + . ID=g7817.t1;Parent=g7817;Name=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 3441 3452 . + . ID=g7817.t1.exon1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 3441 3452 . + 0 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 3696 3933 . + . ID=g7817.t1.exon2;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 3696 3933 . + 0 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 4065 4162 . + . ID=g7817.t1.exon3;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 4065 4162 . + 2 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 4506 4580 . + . ID=g7817.t1.exon4;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 4506 4580 . + 0 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 5138 5339 . + . ID=g7817.t1.exon5;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 5138 5339 . + 0 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 5602 5717 . + . ID=g7817.t1.exon6;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 5602 5717 . + 2 ID=cds.g7817.t1;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 5960 6178 . + . ID=g7817.t1.exon7;Parent=g7817.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 5960 6178 . + 0 ID=cds.g7817.t1;Parent=g7817.t1 #PROT g7817.t1 g7817 MDAQQLLQVEGLCDQMYQADEGSRAASEKMVVEFVESGDCLSKCRFIMDHSRSPYALLFASTTLYKCLVKAYTTLSTEEKIDIRNYALGYIVESPTLPAFVLTSVIRIVCWITKASASWFETWKGEFAFRKLHEEVASFLQMSVDHCIAGVQILSGLVQNINAFDAVRSLAKHRKTASSFRETALLWIFELSLNLLTQVRSKSLQIPDVVQENRLLEALLNLAYNCLSFDFIGTAPDDSSDDVVTVQVPISWRSVFHNPSTVELFFQIYANTPVPCSAEVGFRRFSFLSLPLFRGIRGKEATALSSIPTSVSFSLCVEF* # ORIGINAL: g7815.t1 original gene structure, not modified by PASA NODE_2393_length_6433_cov_35.0637 AUGUSTUS gene 378 923 . - . ID=g7815;Name=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS mRNA 378 923 . - . ID=g7815.t1;Parent=g7815;Name=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 818 923 . - . ID=g7815.t1.exon1;Parent=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 818 923 . - 0 ID=cds.g7815.t1;Parent=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 564 702 . - . ID=g7815.t1.exon2;Parent=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 564 702 . - 2 ID=cds.g7815.t1;Parent=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS exon 378 453 . - . ID=g7815.t1.exon3;Parent=g7815.t1 NODE_2393_length_6433_cov_35.0637 AUGUSTUS CDS 378 453 . - 1 ID=cds.g7815.t1;Parent=g7815.t1 #PROT g7815.t1 g7815 MSSLGKVAVPDVVINLVDLRPFQKNITCEFIVIERRDEMRTGDGHIISSFWIGDKTASAYMSVWDDIGTFVKPGDILRLKGGYASVFKRNLFLYCNRQAQLTRIGE* # PASA_UPDATE: g7816.t1, single gene model update, valid-1, status:[pasa:asmbl_4210,status:3], valid-1 NODE_2393_length_6433_cov_35.0637 . gene 1156 2577 . + . ID=g7816;Name=g7816.t1 NODE_2393_length_6433_cov_35.0637 . mRNA 1156 2577 . + . ID=g7816.t1;Parent=g7816;Name=g7816.t1 NODE_2393_length_6433_cov_35.0637 . five_prime_UTR 1156 1266 . + . ID=g7816.t1.utr5p1;Parent=g7816.t1 NODE_2393_length_6433_cov_35.0637 . exon 1156 1752 . + . ID=g7816.t1.exon1;Parent=g7816.t1 NODE_2393_length_6433_cov_35.0637 . CDS 1267 1752 . + 0 ID=cds.g7816.t1;Parent=g7816.t1 NODE_2393_length_6433_cov_35.0637 . exon 1925 2577 . + . ID=g7816.t1.exon2;Parent=g7816.t1 NODE_2393_length_6433_cov_35.0637 . CDS 1925 2446 . + 0 ID=cds.g7816.t1;Parent=g7816.t1 NODE_2393_length_6433_cov_35.0637 . three_prime_UTR 2447 2577 . + . ID=g7816.t1.utr3p1;Parent=g7816.t1 #PROT g7816.t1 g7816 MERYKILGRIGEGAHGVVFQAKHTETGEVVALKKVPLRRLEDGIPNTALREIKALQEIDHDNVVRLREVFPQGNGFVLVFDYMLSDLCDAMQNPNKPLTEAQIKSYMLMLLRGVAYCHENNIMHRDLKPANLLISPTGHLKLADFGLARVFSSDGDRLYSHQVATRWYRAPELLYGARRYDAGVDMWAVGTIFGELLNNSPLFPGESDIDQLYCVLRVLGTPSERNWPGLSQLPDYNKITFQHMQPIPLEDIVPDAAPEALDLLKRLLVYSSADRISAREAMLHPYFFTDPLPAHHSELPIPVRHGQKARRAGGLEVDVDGPLDLVPPEFLLDWM* # ORIGINAL: g10487.t1 original gene structure, not modified by PASA NODE_2884_length_4847_cov_52.0107 AUGUSTUS gene 257 1414 . - . ID=g10487;Name=g10487.t1 NODE_2884_length_4847_cov_52.0107 AUGUSTUS mRNA 257 1414 . - . ID=g10487.t1;Parent=g10487;Name=g10487.t1 NODE_2884_length_4847_cov_52.0107 AUGUSTUS exon 257 1414 . - . ID=g10487.t1.exon1;Parent=g10487.t1 NODE_2884_length_4847_cov_52.0107 AUGUSTUS CDS 257 1414 . - 0 ID=cds.g10487.t1;Parent=g10487.t1 #PROT g10487.t1 g10487 MVTHRRWRVFVAVGFGSLAVTMLLAASMAFLSEWRLDPPEPVVYSAPGNETTNATRAIWAAPLKGRNAAVVAELSRANDRRRVLVVVIHFNRIDLISLQLCSLRENLRNPFDYVVINEGKDTAMHASISSECARLGVPCISTPLVRFFPTNPSMEVGRTIDWLLSHVATPSNRLVLAMQPDYVLVKPLDLRALMGNEVIAGCWDAREQGGVRVRYIIDGLFAYDAASLPDPEDLVFSCDPWEGCFHNGVRGDTGVKTAGYFEMHRDVTLRSIPYSRVLTRAHLAKEMAPLSRQLYKIDLDICEAAGLAGGYMEVYGENDEIIHLRSASGWNKDFEDVQDRRFGALVPVLRNAWNCPGEPYYLLLTIGMLLLLSGIWLSEAKLVFV* # ORIGINAL: g14073.t1 original gene structure, not modified by PASA NODE_1588_length_10340_cov_41.3456 AUGUSTUS gene 9601 10242 . - . ID=g14073;Name=g14073.t1 NODE_1588_length_10340_cov_41.3456 AUGUSTUS mRNA 9601 10242 . - . ID=g14073.t1;Parent=g14073;Name=g14073.t1 NODE_1588_length_10340_cov_41.3456 AUGUSTUS exon 9601 10242 . - . ID=g14073.t1.exon1;Parent=g14073.t1 NODE_1588_length_10340_cov_41.3456 AUGUSTUS CDS 9601 10242 . - 0 ID=cds.g14073.t1;Parent=g14073.t1 #PROT g14073.t1 g14073 MQYFEVRDGKRLLCRTENILPFHDGLNRLIRGKLTEACSDLFREEAVIFKEKINFKMPGGGGFAPHQDAPAYVTFNQRMHVTAMIAIDGANPANGCLDFVRGEHNKGHFPHTHPGGVLEESYTKRYEAEGRWEPIVTQPGDIMFFHSCAPHRSGPNTTNGPRRAYYITYNPKSDGTFREAYFADKREAFPPDAERIPGKDYSKGGEIYNLASE* # PASA_UPDATE: g14071.t1, single gene model update, valid-1, status:[pasa:asmbl_2048,status:13],[pasa:asmbl_2049,status:12], valid-1 NODE_1588_length_10340_cov_41.3456 . gene 314 2967 . + . ID=g14071;Name=g14071.t1 NODE_1588_length_10340_cov_41.3456 . mRNA 314 2967 . + . ID=g14071.t1;Parent=g14071;Name=g14071.t1 NODE_1588_length_10340_cov_41.3456 . exon 314 1005 . + . ID=g14071.t1.exon1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . CDS 314 1005 . + 0 ID=cds.g14071.t1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . exon 1276 1441 . + . ID=g14071.t1.exon2;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . CDS 1276 1441 . + 1 ID=cds.g14071.t1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . exon 1738 1839 . + . ID=g14071.t1.exon3;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . CDS 1738 1839 . + 0 ID=cds.g14071.t1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . exon 1978 2093 . + . ID=g14071.t1.exon4;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . CDS 1978 2093 . + 0 ID=cds.g14071.t1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . exon 2312 2967 . + . ID=g14071.t1.exon5;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . CDS 2312 2405 . + 1 ID=cds.g14071.t1;Parent=g14071.t1 NODE_1588_length_10340_cov_41.3456 . three_prime_UTR 2406 2967 . + . ID=g14071.t1.utr3p1;Parent=g14071.t1 #PROT g14071.t1 g14071 MRERLVEQFQSFLEFEAEATDPVPVPPNRLLTLLRQAVAYQIEFSRYHPKMIPEIESLLHDFTSLVVPNAIRSRLVGHTSNVKCVAFAGEEGHAILSGGSDSTVRVWLTESAEPLCVLAGHTSRVWDVSSNALGDRVVSASGDSTVRIWALPEDLGAGSTGRCVGVLEGHASDVYSARFHPRGTHIVTGGYDRFVRLYDARTAAVVKAFAAHELAVSQAIFNPHGNLIISGSKDSTIRFWDIVSGLCIKTVSANFGEITSVDVNSAGNQLLIASKDNSNRLVDMRMMRPIRRFRGHQNTSKNFVRACFGPSTSLITGGSEDGIIYTWDVTTGHVLQRLSGHSGVVYSAVWNNQQSMLASCSDGHDVLTWWYDQSKPLVQDEDERRWVTR* # PASA_UPDATE: g14072.t1, single gene model update, valid-1, status:[pasa:asmbl_2047,status:3], valid-1 NODE_1588_length_10340_cov_41.3456 . gene 3940 9024 . - . ID=g14072;Name=g14072.t1 NODE_1588_length_10340_cov_41.3456 . mRNA 3940 9024 . - . ID=g14072.t1;Parent=g14072;Name=g14072.t1 NODE_1588_length_10340_cov_41.3456 . five_prime_UTR 8887 9024 . - . ID=g14072.t1.utr5p1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 8795 9024 . - . ID=g14072.t1.exon1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 8795 8886 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 8519 8588 . - . ID=g14072.t1.exon2;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 8519 8588 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 8227 8322 . - . ID=g14072.t1.exon3;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 8227 8322 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 7942 7995 . - . ID=g14072.t1.exon4;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 7942 7995 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 7484 7668 . - . ID=g14072.t1.exon5;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 7484 7668 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 7076 7153 . - . ID=g14072.t1.exon6;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 7076 7153 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 5825 6808 . - . ID=g14072.t1.exon7;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 5825 6808 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 5476 5584 . - . ID=g14072.t1.exon8;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 5476 5584 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 5160 5285 . - . ID=g14072.t1.exon9;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 5160 5285 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 4835 4962 . - . ID=g14072.t1.exon10;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 4835 4962 . - 0 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 4578 4673 . - . ID=g14072.t1.exon11;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 4578 4673 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . exon 3940 4333 . - . ID=g14072.t1.exon12;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . CDS 4174 4333 . - 1 ID=cds.g14072.t1;Parent=g14072.t1 NODE_1588_length_10340_cov_41.3456 . three_prime_UTR 3940 4173 . - . ID=g14072.t1.utr3p1;Parent=g14072.t1 #PROT g14072.t1 g14072 MRFGVHMHLGKAAFKFKFFATIHAATIRHDDKDVAFGPPCVTMSRGSRSSRTRNTSKWETTPADGAYRSIASFGDEVLEMVVTLYKDSKTNTFEKKEYKFAIEDARSSSKGASILAHHTTDLAAYASLSMSTRRERLPARPARKTVGSADIEVTIACEFLKQGNATDDDMMSTFSRQSQADNNSDDEEEREKHDVIAEIDEEYGAGAGDTPAALRSRAAFPNSAGSSGHTSPTSRLERATQTGGSVRLSGSVAPPVFGNISLGRAGAMSPPPPTSIQTATIPPMPQAYAQSSRTNVRSPPPPIPDASGTSAPPARVASQTTEAVPVGSVAAIAKRLSIPGQPGQADMQGAGVGASGSAFTAPGASGGSIVRSPPPPVPTSTYVQSHSRRTSDLQGGAGGPSPRSVQFYQAPSSGAADMGPGAIPSGYIPPPPQAPSQPLTMQALASVPGGSGPPSGSSSPKKGSAGGARAHSPAAKEEKKEKGAFFSTLRFFRKNNSSEELAVPQSEPAAAPPQKQAVHETAVATKKHGRSTKEDAHALEIERKDRRIAELEDQVLHLQSTIARLHATVSVVSMELEKTKGGEMQLELERREAVARMDLKGWLYKRGDRGPIKLWKRRWFATDLGGRLYYYGTHRGSEPYGYIDIDKITGINIVPDAEQDKNHATFIVSVPGREYFLQAHDAEAMNKWIESLDFVRKLRMESQKFVDTQRQSFSEDGVTRLSGVA* # PASA_UPDATE: g5493.t1, single gene model update, valid-1, status:[pasa:asmbl_7250,status:12], valid-1 NODE_4352_length_1765_cov_219.321 . gene 205 1595 . - . ID=g5493;Name=g5493.t1 NODE_4352_length_1765_cov_219.321 . mRNA 205 1595 . - . ID=g5493.t1;Parent=g5493;Name=g5493.t1 NODE_4352_length_1765_cov_219.321 . exon 1590 1595 . - . ID=g5493.t1.exon1;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . CDS 1590 1595 . - 0 ID=cds.g5493.t1;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . exon 1242 1412 . - . ID=g5493.t1.exon2;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . CDS 1242 1412 . - 0 ID=cds.g5493.t1;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . exon 724 885 . - . ID=g5493.t1.exon3;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . CDS 724 885 . - 0 ID=cds.g5493.t1;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . exon 205 518 . - . ID=g5493.t1.exon4;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . CDS 411 518 . - 0 ID=cds.g5493.t1;Parent=g5493.t1 NODE_4352_length_1765_cov_219.321 . three_prime_UTR 205 410 . - . ID=g5493.t1.utr3p1;Parent=g5493.t1 #PROT g5493.t1 g5493 MMELKRIQKEENRAQAVFPCRLKILPQFIFNKRDPIVVGVQVVDGVLKNGTPICVPAKEGVHIGIVGGIERDHKAVEEAKKGAEVCVKIMHAGGDAPKMMGRHFDETDELVSKISRDSINVLKEFFRDEMTKEDWVLVLQLKKVLDIM* # PASA_UPDATE: g3931.t1, single gene model update, valid-1, status:[pasa:asmbl_3519,status:12], valid-1 NODE_2101_length_7741_cov_40.5933 . gene 1931 5420 . - . ID=g3931;Name=g3931.t1 NODE_2101_length_7741_cov_40.5933 . mRNA 1931 5420 . - . ID=g3931.t1;Parent=g3931;Name=g3931.t1 NODE_2101_length_7741_cov_40.5933 . five_prime_UTR 5384 5420 . - . ID=g3931.t1.utr5p1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 5315 5420 . - . ID=g3931.t1.exon1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 5315 5383 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 5100 5207 . - . ID=g3931.t1.exon2;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 5100 5207 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 4794 4878 . - . ID=g3931.t1.exon3;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 4794 4878 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 4396 4622 . - . ID=g3931.t1.exon4;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 4396 4622 . - 2 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 4072 4169 . - . ID=g3931.t1.exon5;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 4072 4169 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 3724 3867 . - . ID=g3931.t1.exon6;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 3724 3867 . - 1 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 3362 3521 . - . ID=g3931.t1.exon7;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 3362 3521 . - 1 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 2999 3103 . - . ID=g3931.t1.exon8;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 2999 3103 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 2675 2787 . - . ID=g3931.t1.exon9;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 2675 2787 . - 0 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 2282 2358 . - . ID=g3931.t1.exon10;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 2282 2358 . - 1 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . exon 1931 2115 . - . ID=g3931.t1.exon11;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . CDS 1991 2115 . - 2 ID=cds.g3931.t1;Parent=g3931.t1 NODE_2101_length_7741_cov_40.5933 . three_prime_UTR 1931 1990 . - . ID=g3931.t1.utr3p1;Parent=g3931.t1 #PROT g3931.t1 g3931 MATAVEDYASFVSIHRPQLEHYKVPESLWESLFQKLTEDCFDGGNVFAFEENPDYDTNADAASFNPKYFVHATTEVEANTDIWLIDHAWTFRNVHEGRSQLLQIPPLRERLLGLMDLAVGGEDEQSEDDEVVAERETEAIMAHLYKYAFKYELVTADNKTGEQVTCMSDEYGTSAYCYVNDELGSRFAYSAEPNFKFAPFFWVTRGAAFTIVWPIRDTAFGEKATRQPILGIGRFEAQDYWEYRYRVDNTDFEWFCSFDDVADELREYVPKGKVACPLVVGCGNSALSAQMVQDGYEKVHSLDYSPTVISAMKEKYANNLRLEWSVADATNLAEWETSSQEAIVDKGCLDGMLEGGDEAAARKMLSEMCRILKAPGGIFFLISLGSEDLRRPLLEGDGLDWKLVHVSQRSSVQSKTENGVKVVKDVVSFVYVCVHN* # PASA_UPDATE: g3930.t1, single gene model update, valid-1, status:[pasa:asmbl_3520,status:3], valid-1 NODE_2101_length_7741_cov_40.5933 . gene 390 1714 . + . ID=g3930;Name=g3930.t1 NODE_2101_length_7741_cov_40.5933 . mRNA 390 1714 . + . ID=g3930.t1;Parent=g3930;Name=g3930.t1 NODE_2101_length_7741_cov_40.5933 . five_prime_UTR 390 445 . + . ID=g3930.t1.utr5p1;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . exon 390 523 . + . ID=g3930.t1.exon1;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . CDS 446 523 . + 0 ID=cds.g3930.t1;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . exon 772 1029 . + . ID=g3930.t1.exon2;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . CDS 772 1029 . + 0 ID=cds.g3930.t1;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . exon 1265 1714 . + . ID=g3930.t1.exon3;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . CDS 1265 1321 . + 0 ID=cds.g3930.t1;Parent=g3930.t1 NODE_2101_length_7741_cov_40.5933 . three_prime_UTR 1322 1714 . + . ID=g3930.t1.utr3p1;Parent=g3930.t1 #PROT g3930.t1 g3930 MAWVFFQAMVIRLQDTYGPRFFMPQRFRPHRYNYYRSLPQNGNDAMCTIDASNSVESPDNVPPPVREDRRENECAICMCVMVEADAAAPENNEPLFMVTPCRHAFHRQCLEKWMLIKMECPSCRQPLPPP* # ORIGINAL: g3932.t1 original gene structure, not modified by PASA NODE_2101_length_7741_cov_40.5933 AUGUSTUS gene 5777 7634 . - . ID=g3932;Name=g3932.t1 NODE_2101_length_7741_cov_40.5933 AUGUSTUS mRNA 5777 7634 . - . ID=g3932.t1;Parent=g3932;Name=g3932.t1 NODE_2101_length_7741_cov_40.5933 AUGUSTUS exon 7472 7634 . - . ID=g3932.t1.exon1;Parent=g3932.t1 NODE_2101_length_7741_cov_40.5933 AUGUSTUS CDS 7472 7634 . - 0 ID=cds.g3932.t1;Parent=g3932.t1 NODE_2101_length_7741_cov_40.5933 AUGUSTUS exon 5777 7242 . - . ID=g3932.t1.exon2;Parent=g3932.t1 NODE_2101_length_7741_cov_40.5933 AUGUSTUS CDS 5777 7242 . - 2 ID=cds.g3932.t1;Parent=g3932.t1 #PROT g3932.t1 g3932 MSRPRLCEGDKILRVGGTLVEGMDLDEVTRLLKSVAGGMVLDVTSSFADDEANGVKTATAETARVERHAGQPHPARGDANESHVVTLTLGAGEDSFGISVTMPKPKTNNATHIPMVPRIAKVLPNTPAERAGGGLVRAGDCLLSINGEPVVGKSTSFIVAKLKKSVPSVRLTLARTSSAGLPAEVEKNVTRSTHAEAPPPPPYAWQQPLQQVTGSHINSQSQSELLGNAVAPIRGATHGKRRAVKQSQSKKGNAQATGAARHAHADAETASVRTAQSGDVGDLSGYAHVASDAPQPAFASAAVTAPPKRRHVMKKAATIAPLSLAVATEVGVGVTIPGPPVAAQQDTTKGRKSAKRTAEEAADRQPPRKKPRARKKQAMDDVSQVDEMHWTAESGASNGLGNASGASEESVHGGTEMHASSVPHPQRTASEGVAHFNKGTAVDAGAGGGMADYERQMRRHAELQLHLEMLRRRKEELRLLHESHFGGNAGASGLPVGTSTGYPPERGHGDLGGGQSEPRNDAYAVYNGASHVNGDHDARSQQ* # ORIGINAL: g8902.t1 original gene structure, not modified by PASA NODE_416_length_24216_cov_62.6982 AUGUSTUS gene 1950 4547 . - . ID=g8902;Name=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS mRNA 1950 4547 . - . ID=g8902.t1;Parent=g8902;Name=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 4361 4547 . - . ID=g8902.t1.exon1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 4361 4547 . - 0 ID=cds.g8902.t1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 3906 4112 . - . ID=g8902.t1.exon2;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 3906 4112 . - 2 ID=cds.g8902.t1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 3516 3647 . - . ID=g8902.t1.exon3;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 3516 3647 . - 2 ID=cds.g8902.t1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 3203 3376 . - . ID=g8902.t1.exon4;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 3203 3376 . - 2 ID=cds.g8902.t1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 2904 2975 . - . ID=g8902.t1.exon5;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 2904 2975 . - 2 ID=cds.g8902.t1;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS exon 1950 2737 . - . ID=g8902.t1.exon6;Parent=g8902.t1 NODE_416_length_24216_cov_62.6982 AUGUSTUS CDS 1950 2737 . - 2 ID=cds.g8902.t1;Parent=g8902.t1 #PROT g8902.t1 g8902 MACQPGACAPFVSAKHDGDGKDEPLPSTDSLLTGDAVYDGKKHALLLTSSRLHATPATDRSKELQIDLDDVYGVQPHAKHPRIFVIYSMPLKKRTRFERSKKSHAFQCETIDDASRWTAAIRAVLAGVPIGMDPLPSRRIFVIINPVGGTRAAKSIFEKQVAPIFAVGNVRATVNFTERAAHATEMTRTLNLSEYDAIVTVSGDGLLHEAVNGLFLREDWKEALRTPVGIIPAGSGNGLGRSVETPEPALAAFSVVKGHSRPFDIMSCQQGDSVLYGHLCFYWGIFADVDIESERYRWAGPARFTFSAIGRMSSIRKYRGRLSFLPWTPTPSESAQGSCDGSAPSEASAAGAAQAKPPSPAVLPGQPLPEGWETVETDFVSVVGMNAGWAAKDMFVAPYSHIHDGAIDITWVTAAEASSARLLAMFLDGESGEMSKHELVHYRKARAFVLEPLCDPPGILDVDGEQIRSEAIAIESHQGIARILCPKRLNLPVHPVPATFDKVAARAPPSAPESSSAKR* # PASA_UPDATE: g8907.t1, single gene model update, valid-1, status:[pasa:asmbl_7057,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 17395 21032 . + . ID=g8907;Name=g8907.t1 NODE_416_length_24216_cov_62.6982 . mRNA 17395 21032 . + . ID=g8907.t1;Parent=g8907;Name=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 17395 17898 . + . ID=g8907.t1.exon1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 17395 17898 . + 0 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 18036 18325 . + . ID=g8907.t1.exon2;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 18036 18325 . + 0 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 18575 18630 . + . ID=g8907.t1.exon3;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 18575 18630 . + 1 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 18806 18935 . + . ID=g8907.t1.exon4;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 18806 18935 . + 2 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 19052 19170 . + . ID=g8907.t1.exon5;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 19052 19170 . + 1 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . exon 19282 21032 . + . ID=g8907.t1.exon6;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . CDS 19282 20678 . + 2 ID=cds.g8907.t1;Parent=g8907.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 20679 21032 . + . ID=g8907.t1.utr3p1;Parent=g8907.t1 #PROT g8907.t1 g8907 MVANTSPTIPTGHEEPPFHGSHPQDLSRLSLPKGSLSGLPASPVVAAASRALPAPSQPRQSQMPKSPRSQSPPNASVPASSSPRASMQPSAARTASPMSSPRDNSLGLPAAAGGGPGLSPALSPIPGPAGVRVPPVQQYIGNYLLGKTLGHGSFAKVKAATHLPTNSKVAIKMIFKNKLKDEYARRHLRREAEILRRLDHPHIIKLYEVIETDELFCMVTEEAAGGEVLDYIVTHDRLQEKEARKFMLQVLSAVRYLHANKIVHRDLKAENLLLDGSLNIKLIDFGLSNNYTDSSFLATRCGSLSYSSPEILAGKKYVGPEVDVWSLGVNLYAMLTGKLPFEGTTVTNVHAQILDEKYALPDYLSEHCKDLFRRIFCVSSDKRITIAGLMEHPWLMQSAEPPQAAVSPSPLSPIDDKSSAGGSPAAVEFPSPRGIMHGVAETTECEAWALDQMWTMGFTRDAVVASVRKRECDALCGTFALLVLKRAKELALEKKRAAPVSKRRRGLSVAVRNTSSLRESESDKGSPGKSMLFAARRAVARKTSMERQCAVNQGDLCEQSQSSSQGHDAQSAVAGSGVRTDDALSSPTPSTSQAGGGLQRKGSLNARSRRPSNLTLPAIGPSDAASIESLVATNSSPSSPRTNPVTPREGSAGSGSRPTTPRRSSQALATAARLSSLPTVPNAQQGMSNSKSEPMGSAQGRHIRLGSMGRMVWSQDDERVDAARKRADTEDMGASGAQARFPLNCSMVSAKAPHEIRREVERVLTGSGVDYAAGSGEAEMSFACRKGELRFEIDICKIPRLALNGVRFKRIHGDVFGYKAISTELIARMRL* # PASA_UPDATE: g8908.t1, single gene model update, valid-1, status:[pasa:asmbl_7056,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 21591 22733 . - . ID=g8908;Name=g8908.t1 NODE_416_length_24216_cov_62.6982 . mRNA 21591 22733 . - . ID=g8908.t1;Parent=g8908;Name=g8908.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 22664 22733 . - . ID=g8908.t1.utr5p1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . exon 22573 22733 . - . ID=g8908.t1.exon1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . CDS 22573 22663 . - 0 ID=cds.g8908.t1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . exon 22408 22462 . - . ID=g8908.t1.exon2;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . CDS 22408 22462 . - 2 ID=cds.g8908.t1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . exon 22172 22278 . - . ID=g8908.t1.exon3;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . CDS 22172 22278 . - 1 ID=cds.g8908.t1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . exon 21953 22047 . - . ID=g8908.t1.exon4;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . CDS 21953 22047 . - 2 ID=cds.g8908.t1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . exon 21591 21817 . - . ID=g8908.t1.exon5;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . CDS 21668 21817 . - 0 ID=cds.g8908.t1;Parent=g8908.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 21591 21667 . - . ID=g8908.t1.utr3p1;Parent=g8908.t1 #PROT g8908.t1 g8908 MIPILVRPFRQFMPTLQGAFSWRRRPFHHTSRILSGDYEHQDPKSPDEIVNITYVLRDGKRVPVRGKVGDNAMYLAHRYDIPLEGACEASLACSTCHVYVLDDYLDKLPPPEEKEEDMLDLAIFLKENSRLGCQIKLTKEMEGMVLALPKATRNFYVDGHVPKPH* # PASA_UPDATE: g8904.t1, single gene model update, valid-1, status:[pasa:asmbl_7051,status:3], valid-1 NODE_416_length_24216_cov_62.6982 . gene 8359 10995 . + . ID=g8904;Name=g8904.t1 NODE_416_length_24216_cov_62.6982 . mRNA 8359 10995 . + . ID=g8904.t1;Parent=g8904;Name=g8904.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 8359 8542 . + . ID=g8904.t1.utr5p1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . exon 8359 8554 . + . ID=g8904.t1.exon1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . CDS 8543 8554 . + 0 ID=cds.g8904.t1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . exon 8680 8743 . + . ID=g8904.t1.exon2;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . CDS 8680 8743 . + 0 ID=cds.g8904.t1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . exon 8845 10367 . + . ID=g8904.t1.exon3;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . CDS 8845 10367 . + 2 ID=cds.g8904.t1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . exon 10632 10995 . + . ID=g8904.t1.exon4;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . CDS 10632 10943 . + 0 ID=cds.g8904.t1;Parent=g8904.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 10944 10995 . + . ID=g8904.t1.utr3p1;Parent=g8904.t1 #PROT g8904.t1 g8904 MSSDDEALASDDEADLRRLRAAKGIGASVNKRWMDKVQQERAAADEALALRNERAAAAGDASADDSGPDVGPAPPPHAHARGGEADDSGPDVGPAPPPVGHDRDGDNDDSSEADVGPPLPPGFNASAQAGDGSDDGESDSDDGDDDDASGAARSDALPISHEIKLGHGARTVSALALDPSGTRLLTGGYDYELRMWDFATMDVRMKSFRSIEPYPGQQLVGLHYSPTGDQFVAASGAAQVKTYDRDGHQLLETVRGDMYMTDMANTKGHVSAVLCAAWHPSNRSLFATSSSDGTVRIWDVTTARGNVLPKQRDVIKARGTGMRKSAVTAFAFSPDGASIASACQDGSLQVWKVGGPYSRPVAAANEAHGNGTETSCVRFSSDGRFILSRGGDDTLKLWDVRNMKAPLRSTGGLDNLFPMTDCGFSPDGRHVYTGTSVRKNTGTGHLVFFDMGTFERVKAVPFEGASVVRALWHPRLNQIVVGCSNGTAHVLYSPTDSTKGALLCAGKQKKRVDASDFAVARPIIAPHSLPMYQDKPKSNKRKREKERLDPVKSHRPQLPVTGAGQGGRVGVTTWTHHVMMQHVSKDMSRDVDPREAFLSVAKDAEENPFWSTAYQSTQPTTLFEQSDDEEDGRKKK* # PASA_UPDATE: g8903.t1, single gene model update, valid-1, status:[pasa:asmbl_7054,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 4991 8080 . - . ID=g8903;Name=g8903.t1 NODE_416_length_24216_cov_62.6982 . mRNA 4991 8080 . - . ID=g8903.t1;Parent=g8903;Name=g8903.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 8034 8080 . - . ID=g8903.t1.utr5p1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 7897 8080 . - . ID=g8903.t1.exon1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 7897 8033 . - 0 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 7714 7812 . - . ID=g8903.t1.exon2;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 7714 7812 . - 1 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 6921 7434 . - . ID=g8903.t1.exon3;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 6921 7434 . - 1 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 6036 6568 . - . ID=g8903.t1.exon4;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 6036 6568 . - 0 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 5684 5872 . - . ID=g8903.t1.exon5;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 5684 5872 . - 1 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 5394 5512 . - . ID=g8903.t1.exon6;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 5394 5512 . - 1 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . exon 4991 5170 . - . ID=g8903.t1.exon7;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . CDS 5055 5170 . - 2 ID=cds.g8903.t1;Parent=g8903.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 4991 5054 . - . ID=g8903.t1.utr3p1;Parent=g8903.t1 #PROT g8903.t1 g8903 MFASLRIAGAFSRRNGVTGVRHFGSAGVYRIPDIKNEPNLLFLKGSAERVALTQALADQKGRVVDIPCIVGGKEVWTGNVREQVMPSDHGKVIARFHVADEALLQAAIRAALEAKAEWEAIPFDQRAAVFLKAADLLSTTWRARVLAATMLGQGKNIYQAEIDAAAETIDFWRFNVKYAADIYAEQPTENGARMWNRQEYRALEGFVAAVTPFNFTAIGANLGSSPAIVGNTTVWKPSDTAVLSNYYIMKVLQEAGLPAGVVNFVPCDGPLFGRTVTTSRDLGALAFTGSTATFRTLWRSISANVDSYKTYPRMIGECGGKNFHLVHSSHGDDIAHIVNNTVRSTFEYSGQKCSACSRMYVPDDLWPAIREGLVRETAQVAVGQPEDPSVLVSAVIDGRSFAKIKGFIDRARASKDVKVIAGATYDDSKGYFVQPTIFEVSDIQHELMREEIFGPVLSVHVYPRDKYDDVLRTIAETSQYALTGAFFARDRYTIMKTANALRHACGNLYINDKSTGSVVGQQPFGGARLSGTNDKAGAPQFMQRFMSALAIKENFVPLADWRYPYMKE* # PASA_UPDATE: g8906.t1, single gene model update, valid-1, status:[pasa:asmbl_7052,status:3], valid-1 NODE_416_length_24216_cov_62.6982 . gene 13270 15553 . + . ID=g8906;Name=g8906.t1 NODE_416_length_24216_cov_62.6982 . mRNA 13270 15553 . + . ID=g8906.t1;Parent=g8906;Name=g8906.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 13270 13321 . + . ID=g8906.t1.utr5p1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 13270 13431 . + . ID=g8906.t1.exon1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 13322 13431 . + 0 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 13541 13639 . + . ID=g8906.t1.exon2;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 13541 13639 . + 1 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 13751 13839 . + . ID=g8906.t1.exon3;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 13751 13839 . + 1 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 13949 14073 . + . ID=g8906.t1.exon4;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 13949 14073 . + 2 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 14261 14309 . + . ID=g8906.t1.exon5;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 14261 14309 . + 0 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 14417 14481 . + . ID=g8906.t1.exon6;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 14417 14481 . + 2 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 14571 14641 . + . ID=g8906.t1.exon7;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 14571 14641 . + 0 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 14825 14896 . + . ID=g8906.t1.exon8;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 14825 14896 . + 1 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 15068 15221 . + . ID=g8906.t1.exon9;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 15068 15221 . + 1 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . exon 15404 15553 . + . ID=g8906.t1.exon10;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . CDS 15404 15499 . + 0 ID=cds.g8906.t1;Parent=g8906.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 15500 15553 . + . ID=g8906.t1.utr3p1;Parent=g8906.t1 #PROT g8906.t1 g8906 MASIISASRRLGLVAASAGGRGVHRMSTSAAETPVYQFKTLLVTRPSAHILRVELNRPKKSNAMNRDFWREIRECFAAISDDSDCRAVVLTGAGKNFTAGLDLVDAGQDIFGIETSDAARRAFALRKVIVAYQESFSAIERCPKPVIAAIHGACVGGGIDMVSACCVRLASSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARKFDAAEAKQMGFISRISGDTQESVVQDALAMAGEIAKRSPVAITGTKVNLNYARDHPTANALDYMANWNMAMLQTDDIMQCMQASMSKTEPVFSKL* # PASA_UPDATE: g8905.t1, single gene model update, valid-1, status:[pasa:asmbl_7055,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 11102 12762 . - . ID=g8905;Name=g8905.t1 NODE_416_length_24216_cov_62.6982 . mRNA 11102 12762 . - . ID=g8905.t1;Parent=g8905;Name=g8905.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 12693 12762 . - . ID=g8905.t1.utr5p1;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . exon 12555 12762 . - . ID=g8905.t1.exon1;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . CDS 12555 12692 . - 0 ID=cds.g8905.t1;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . exon 12223 12420 . - . ID=g8905.t1.exon2;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . CDS 12223 12420 . - 0 ID=cds.g8905.t1;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . exon 11102 12082 . - . ID=g8905.t1.exon3;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . CDS 11363 12082 . - 0 ID=cds.g8905.t1;Parent=g8905.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 11102 11362 . - . ID=g8905.t1.utr3p1;Parent=g8905.t1 #PROT g8905.t1 g8905 MGNTQTTEVPAAQQILQTVMDREQVDRAAQEYLDFFQENDRTHDKKVDERKTNYAKMVNYYYDLATDFYEYGWGQSFHFAPRYQGESFEQSIARHEHHLALKMKLEKGQRVLDVGCGVGGPLREIARFSNAHVTGLNNNAYQIQRAQLHTTRLHLESLCSYVKGDFMKMPIEDNTFDAVYQIEATCHAPNKVGVYSEIFRVMKPGAVFGGYEWIMTDKYDATNEIHRRIKLGIEEGDGLPDMTKSDDVLAALKTVGFEILEFYDMAPESPVPWYQPLAGSLSLTGFRHTQMGRWCTHKMCQALEYTRIAPNGTVKISNMLMNAADALVEGGRLDIFTPMFFVMVRKPLDAK* # PASA_UPDATE: g8909.t1, single gene model update, valid-1, status:[pasa:asmbl_7053,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 23176 24167 . + . ID=g8909;Name=g8909.t1 NODE_416_length_24216_cov_62.6982 . mRNA 23176 24167 . + . ID=g8909.t1;Parent=g8909;Name=g8909.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 23176 23239 . + . ID=g8909.t1.utr5p1;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . exon 23176 23252 . + . ID=g8909.t1.exon1;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . CDS 23240 23252 . + 0 ID=cds.g8909.t1;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . exon 23380 23414 . + . ID=g8909.t1.exon2;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . CDS 23380 23414 . + 2 ID=cds.g8909.t1;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . exon 23567 23721 . + . ID=g8909.t1.exon3;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . CDS 23567 23721 . + 0 ID=cds.g8909.t1;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . exon 23875 24167 . + . ID=g8909.t1.exon4;Parent=g8909.t1 NODE_416_length_24216_cov_62.6982 . CDS 23875 24167 . + 1 ID=cds.g8909.t1;Parent=g8909.t1;3_prime_partial=true #PROT g8909.t1 g8909 MAGRGVHGLVTEGNYQYMPGFGNEFASEALPDALPKGQNSPQVCPYNLYAEQINGTAFTVGIDRNQRSWFYRIRPAVCHTPFTHIDNPGNFVADWAGRRPNPNQTRWSPFDIPASTTKVDFVQGIATLAGAGDPTLRHGIAVHIYACNVSMENKAFQNADGDFLI # PASA_UPDATE: g8901.t1, single gene model update, valid-1, status:[pasa:asmbl_7050,status:3], valid-1 # PASA_UPDATE: g8901.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7049,status:12], valid-1 NODE_416_length_24216_cov_62.6982 . gene 28 1754 . + . ID=g8901;Name=g8901.t1 NODE_416_length_24216_cov_62.6982 . mRNA 28 1754 . + . ID=g8901.t1;Parent=g8901;Name=g8901.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 28 222 . + . ID=g8901.t1.utr5p1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . exon 28 476 . + . ID=g8901.t1.exon1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . CDS 223 476 . + 0 ID=cds.g8901.t1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . exon 774 1039 . + . ID=g8901.t1.exon2;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . CDS 774 1039 . + 1 ID=cds.g8901.t1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . exon 1353 1754 . + . ID=g8901.t1.exon3;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . CDS 1353 1552 . + 2 ID=cds.g8901.t1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . three_prime_UTR 1553 1754 . + . ID=g8901.t1.utr3p1;Parent=g8901.t1 NODE_416_length_24216_cov_62.6982 . mRNA 28 1333 . + . ID=g8901.t1.1.5b6be70c;Parent=g8901;Name=g8901.t1 NODE_416_length_24216_cov_62.6982 . five_prime_UTR 28 222 . + . ID=g8901.t1.1.5b6be70c.utr5p1;Parent=g8901.t1.1.5b6be70c NODE_416_length_24216_cov_62.6982 . exon 28 476 . + . ID=g8901.t1.1.5b6be70c.exon1;Parent=g8901.t1.1.5b6be70c NODE_416_length_24216_cov_62.6982 . CDS 223 476 . + 0 ID=cds.g8901.t1.1.5b6be70c;Parent=g8901.t1.1.5b6be70c NODE_416_length_24216_cov_62.6982 . exon 774 1333 . + . ID=g8901.t1.1.5b6be70c.exon2;Parent=g8901.t1.1.5b6be70c NODE_416_length_24216_cov_62.6982 . CDS 774 1152 . + 1 ID=cds.g8901.t1.1.5b6be70c;Parent=g8901.t1.1.5b6be70c NODE_416_length_24216_cov_62.6982 . three_prime_UTR 1153 1333 . + . ID=g8901.t1.1.5b6be70c.utr3p1;Parent=g8901.t1.1.5b6be70c #PROT g8901.t1 g8901 MTVMRDIAVARRGGKGESVITKVQDFQDDPVLFEYCQHPRLLQYVQCFTGPSIRSVHSMLINKPPNTGPTSRHPMHQDLLYFPFRPANRICASWTAMEPITRKNGCLVVVPGTHKGELLEHGYPEWEGGVNKAYHGIKNFDPSQPMLHLEMDPGDTVFFHPILIHGSGENRTQGYRKAISCHFAGTQCHYIDTEGTVQELLAKEIELMASKRMKGIEITFSDLWRFKSRLVQGEDGTLI* #PROT g8901.t1.1.5b6be70c g8901 MTVMRDIAVARRGGKGESVITKVQDFQDDPVLFEYCQHPRLLQYVQCFTGPSIRSVHSMLINKPPNTGPTSRHPMHQDLLYFPFRPANRICASWTAMEPITRKNGCLVVVPGTHKGELLEHGYPEWEGGVNKAYHGIKNFDPSQPMLHLEMDPGDTVFFHPILIHGSGENRTQGACLELECICAYAHACFAFLLLFDFQSSQCAYFIDCV* # ORIGINAL: g3444.t1 original gene structure, not modified by PASA NODE_2186_length_7370_cov_81.4226 AUGUSTUS gene 2593 3021 . + . ID=g3444;Name=g3444.t1 NODE_2186_length_7370_cov_81.4226 AUGUSTUS mRNA 2593 3021 . + . ID=g3444.t1;Parent=g3444;Name=g3444.t1 NODE_2186_length_7370_cov_81.4226 AUGUSTUS exon 2593 3021 . + . ID=g3444.t1.exon1;Parent=g3444.t1 NODE_2186_length_7370_cov_81.4226 AUGUSTUS CDS 2593 3021 . + 0 ID=cds.g3444.t1;Parent=g3444.t1 #PROT g3444.t1 g3444 MIVLGTSICPAKQAHGPAEGLSETSAQQWRRVGESMQKHDRSSLRSFFNFDEEWPGRVVRTDEGGGINSGGGGGDPSQRGGATLTSVDSAIGHLETAYALTVPDDPDTYAETVKPGEERSLYTLENVMFRKDGSSATGHPLA* # PASA_UPDATE: g3445.t1, single gene model update, valid-1, status:[pasa:asmbl_3712,status:12], valid-1 NODE_2186_length_7370_cov_81.4226 . gene 3747 6981 . - . ID=g3445;Name=g3445.t1 NODE_2186_length_7370_cov_81.4226 . mRNA 3747 6981 . - . ID=g3445.t1;Parent=g3445;Name=g3445.t1 NODE_2186_length_7370_cov_81.4226 . five_prime_UTR 6979 6981 . - . ID=g3445.t1.utr5p1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 6958 6981 . - . ID=g3445.t1.exon1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 6958 6978 . - 0 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 6559 6692 . - . ID=g3445.t1.exon2;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 6559 6692 . - 0 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 6153 6228 . - . ID=g3445.t1.exon3;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 6153 6228 . - 1 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 5754 5936 . - . ID=g3445.t1.exon4;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 5754 5936 . - 0 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 4710 4854 . - . ID=g3445.t1.exon5;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 4710 4854 . - 0 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 4255 4603 . - . ID=g3445.t1.exon6;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 4255 4603 . - 2 ID=cds.g3445.t1;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . exon 3747 3807 . - . ID=g3445.t1.exon7;Parent=g3445.t1 NODE_2186_length_7370_cov_81.4226 . CDS 3747 3807 . - 1 ID=cds.g3445.t1;Parent=g3445.t1 #PROT g3445.t1 g3445 METHNVKFLRDYVNYDMPARTIKKVVLNESEIHSGDPLVIIRLDGLDTMLAWGMGAHTGHFTVAQWIDNELYVLESQDGWYWPNHNIQKTPYRQWLQWAEEASFNVVHLPLSPEKRALYNETAAIEAFKFVEGMPYGCDNFPPPLSSELLMVGTTLLDHFLPSIADLMWNQAINLRLGTWGLRTYDAYREADRRNMSFCELITLPEQDAWFYDKDSQRPNKGLMCDALVVYMWKAAGLFPADIADDIQVTEFTNWDAYSLNFFDADYKRPQECIDADPDSQFCQILGNYRMSLPGYNTKTPYRHIAEKCPSLAPSFDRPAQC* # ORIGINAL: g2949.t1 original gene structure, not modified by PASA NODE_8017_length_392_cov_44.8896_potentialcontaminant AUGUSTUS gene 138 392 . + . ID=g2949;Name=g2949.t1 NODE_8017_length_392_cov_44.8896_potentialcontaminant AUGUSTUS mRNA 138 392 . + . ID=g2949.t1;Parent=g2949;Name=g2949.t1 NODE_8017_length_392_cov_44.8896_potentialcontaminant AUGUSTUS exon 138 392 . + . ID=g2949.t1.exon1;Parent=g2949.t1 NODE_8017_length_392_cov_44.8896_potentialcontaminant AUGUSTUS CDS 138 392 . + 0 ID=cds.g2949.t1;Parent=g2949.t1 #PROT g2949.t1 g2949 MSVLDQARQARADLYANNYHATIRSALETYLFSMSAAITKDNATPELTGSTPMLQPPTYALTFGGDGAATINDLMTNLSDNLATL # ORIGINAL: g2742.t1 original gene structure, not modified by PASA NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS gene 34 1049 . - . ID=g2742;Name=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS mRNA 34 1049 . - . ID=g2742.t1;Parent=g2742;Name=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS exon 812 1049 . - . ID=g2742.t1.exon1;Parent=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS CDS 812 1049 . - 0 ID=cds.g2742.t1;Parent=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS exon 402 529 . - . ID=g2742.t1.exon2;Parent=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS CDS 402 529 . - 2 ID=cds.g2742.t1;Parent=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS exon 34 198 . - . ID=g2742.t1.exon3;Parent=g2742.t1 NODE_4672_length_1347_cov_27.3947_potentialcontaminant AUGUSTUS CDS 34 198 . - 0 ID=cds.g2742.t1;Parent=g2742.t1 #PROT g2742.t1 g2742 MPNIVAIPRVPSISVSTEARPLSECTLARVDFTQHIVVCNRSDRMVHFIMPLRLSAMRQHVPIVVVAQDEPSEKEWAMIGIFPHVYFVHGTPMHYANLFRAGVERASKVVVLQCQRDTSDVKDQYLLDSEVIVISRSISSRCPGAHIVTELQHPRNTKYLSQQSIPRLSDRKAISGR # PASA_UPDATE: g14189.t1, single gene model update, valid-1, status:[pasa:asmbl_6540,status:12], valid-1 NODE_3783_length_2766_cov_38.8681 . gene 297 2694 . + . ID=g14189;Name=g14189.t1 NODE_3783_length_2766_cov_38.8681 . mRNA 297 2694 . + . ID=g14189.t1;Parent=g14189;Name=g14189.t1 NODE_3783_length_2766_cov_38.8681 . five_prime_UTR 297 497 . + . ID=g14189.t1.utr5p1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 297 596 . + . ID=g14189.t1.exon1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 498 596 . + 0 ID=cds.g14189.t1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 818 907 . + . ID=g14189.t1.exon2;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 818 907 . + 0 ID=cds.g14189.t1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 1193 1504 . + . ID=g14189.t1.exon3;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 1193 1504 . + 0 ID=cds.g14189.t1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 1794 1904 . + . ID=g14189.t1.exon4;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 1794 1904 . + 0 ID=cds.g14189.t1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 2080 2197 . + . ID=g14189.t1.exon5;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 2080 2197 . + 0 ID=cds.g14189.t1;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . exon 2441 2694 . + . ID=g14189.t1.exon6;Parent=g14189.t1 NODE_3783_length_2766_cov_38.8681 . CDS 2441 2694 . + 2 ID=cds.g14189.t1;Parent=g14189.t1 #PROT g14189.t1 g14189 MASLLEPQIAAELQAVNHSSHPLALGDDEDGDEVLQLPGPSILRCASESRPRTVSSTGRVIQPYETITDAERKAISELRSQLDKMRATSPAKDIPRHDFDDHDHVRFLRGNEMRIRDSATQMIQAEVYIAQCRPSQLTIAHVEEELKKGYAYFQAGVNDALGRSILVFDFQKFNPKTSDRVDVFRLGIYLMERALENAPTHAHQVVMLMNYDNWKLKQSDRIMSKTLTAILTTVYAEHIGAVYLLNTPGYFKILWKMVKPWLPKRTVKKICMTSNAKLREDKSLTLACIPAFLGGSCGFNVEAWIQVGYGKSCDLHCALLSCTYQVL* # ORIGINAL: g12488.t1 original gene structure, not modified by PASA NODE_1880_length_8742_cov_38.2578 AUGUSTUS gene 211 5927 . + . ID=g12488;Name=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS mRNA 211 5927 . + . ID=g12488.t1;Parent=g12488;Name=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 211 368 . + . ID=g12488.t1.exon1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 211 368 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 605 693 . + . ID=g12488.t1.exon2;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 605 693 . + 1 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 1062 1142 . + . ID=g12488.t1.exon3;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 1062 1142 . + 2 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 1352 1420 . + . ID=g12488.t1.exon4;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 1352 1420 . + 2 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 1627 1808 . + . ID=g12488.t1.exon5;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 1627 1808 . + 2 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 1995 2096 . + . ID=g12488.t1.exon6;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 1995 2096 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 2421 2492 . + . ID=g12488.t1.exon7;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 2421 2492 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 2922 3008 . + . ID=g12488.t1.exon8;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 2922 3008 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 3208 3422 . + . ID=g12488.t1.exon9;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 3208 3422 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 3669 3791 . + . ID=g12488.t1.exon10;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 3669 3791 . + 1 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 3949 4052 . + . ID=g12488.t1.exon11;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 3949 4052 . + 1 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 4369 4470 . + . ID=g12488.t1.exon12;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 4369 4470 . + 2 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 4883 4976 . + . ID=g12488.t1.exon13;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 4883 4976 . + 2 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 5244 5427 . + . ID=g12488.t1.exon14;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 5244 5427 . + 1 ID=cds.g12488.t1;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS exon 5718 5927 . + . ID=g12488.t1.exon15;Parent=g12488.t1 NODE_1880_length_8742_cov_38.2578 AUGUSTUS CDS 5718 5927 . + 0 ID=cds.g12488.t1;Parent=g12488.t1 #PROT g12488.t1 g12488 IAARLATGGAPGTDSADASQTAAQPSADASGENQPTSRKRPHEDGEGDEASERDEPDRKRPQYESVRQEGDEDQQAPPPADDQAAAPWDQSQQPPQSQLPHHSQSGAHAGLGYMTTEELSVPNRAVGSVIGKEGETIKRLQAQTGARIQVAQNVGLPDRKVTVSGTEESVRNAVQALQEVISQNNQQPQQGQEWGNSSSGGMPQMGQPMGQPMGQPESVTMMVPATKVGLIIGRGGEKIRELQGRSGARLQLIQDGLPPGATEKPLVISGDGNCVRAAQDLVREILEPLQGGGDYGAPQHMSGSNNAPLGGAPAYGGPTSSFEIRIPREFVGTVIGHGGETIKRLQAETGCRIQFQPDIPGTPERVLSLMGAPDILGRAHQMVEQLMEDSRQRRASGLPVPPPMARSGADTVYFPVPAKRVGLVIGRGGETIKHLQQTTGASIQLDRNHLPDAVEKTFIIMGTHQQIEHAKGMIMERVNSDGPPARGSQGGFGGGYGQPQQQQGQWGGYGQQQQGGQDYYNNAAGGYYQAQTQQPQAAQAYYGQQAQTGGEAQPDYAEQQRQWAQYYAQYGYGDYYGQQAQQGQQQAQAQQPYEYGAYDQSAQQQQQQQPADGAAGDHGQQGQ* # PASA_UPDATE: g7538.t1, single gene model update, valid-1, status:[pasa:asmbl_7137,status:12], valid-1 NODE_4247_length_1938_cov_41.7016 . gene 237 1253 . - . ID=g7538;Name=g7538.t1 NODE_4247_length_1938_cov_41.7016 . mRNA 237 1253 . - . ID=g7538.t1;Parent=g7538;Name=g7538.t1 NODE_4247_length_1938_cov_41.7016 . five_prime_UTR 1153 1253 . - . ID=g7538.t1.utr5p1;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . exon 1050 1253 . - . ID=g7538.t1.exon1;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . CDS 1050 1152 . - 0 ID=cds.g7538.t1;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . exon 750 923 . - . ID=g7538.t1.exon2;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . CDS 750 923 . - 2 ID=cds.g7538.t1;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . exon 237 563 . - . ID=g7538.t1.exon3;Parent=g7538.t1 NODE_4247_length_1938_cov_41.7016 . CDS 237 563 . - 2 ID=cds.g7538.t1;Parent=g7538.t1;3_prime_partial=true #PROT g7538.t1 g7538 MASHRVIGAILLALAFTSVICAEEQKVVDSVRLKEAISSVVSDTLRDRRGITDLPDDIKNWIQGAVEDTIVGILGKINIKDIELAITKMALPPVGLTIDTPAGINATLEITANSTDIDVNLMSEVQYLDVVLHSEKMPMNVNLNGATMPMNVSLYSGQMPMGVVIDSKDTPMDIKINSSSLPLNVNLRANDLPMNIALNTQ # PASA_UPDATE: g3156.t1, single gene model update, valid-1, status:[pasa:asmbl_3438,status:12], valid-1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . gene 262 6382 . - . ID=g3156;Name=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . mRNA 262 6382 . - . ID=g3156.t1;Parent=g3156;Name=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 6098 6382 . - . ID=g3156.t1.exon1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 6098 6382 . - 0 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 5477 5779 . - . ID=g3156.t1.exon2;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 5477 5779 . - 0 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 4363 5155 . - . ID=g3156.t1.exon3;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 4363 5155 . - 0 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 3583 4193 . - . ID=g3156.t1.exon4;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 3583 4193 . - 2 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 2966 3187 . - . ID=g3156.t1.exon5;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 2966 3187 . - 0 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . exon 262 2445 . - . ID=g3156.t1.exon6;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . CDS 721 2445 . - 0 ID=cds.g3156.t1;Parent=g3156.t1 NODE_2077_length_7843_cov_38.0456_potentialcontaminant . three_prime_UTR 262 720 . - . ID=g3156.t1.utr3p1;Parent=g3156.t1 #PROT g3156.t1 g3156 MADYANTSELPVVRGGAAWHLPGTVEQRITAGRFLCLFSVLCTSAVVFPSHFWISFCVGMAVMLPLMATDDPWRAIRLAFVLTAVCIFTALINSDVVVVVSRTGGVIARDSPSVMRMPSSPVARSMGGSANTEVHVNVFPKPKIELFGDADICPGENATLLFAMSDSGAWRFNLTVTKEGKEVTTIPLNVTGPEHRYHTSIPGTYEFEHKRRGSGPMGALGHVVAQRKTCEAAFDGYASVRLHDSPTVTWSAEEVCQDRANGTIAMQLSGTPPFTIRYEFQDSACDRDMSNSGVCAPGRVDAPTITASVHSYEMTAVYGILHRIVSLRDAYCTSVDLPPPVAVRMHPTPAVWASGGSCDGDFIDLRLSGTAPFAVTCMRMRGRSSGGSDGAFNDADDGSDGGVVEELDICKEVNANRIEIPAEKGMTYRIESVSDSLCPGAISGGPYVVTTQARPSVRMSGKRLLPTDSDTVDIIAEFEGSPPFSFEYLTPSGTPVTLTDISEKSRRIPVREAGRYVPVSIRDRHCTGSVEGHADVRRLPSARIDRENAPRHLCRGLETSLPVLLSTPTTECPFSIAYSFEPKEDASDDADGSIDGKSRAELHSLTGGYVRIPVAAAGRYTLLEVSDCDGVAVHLDELWVVDQAESPLLSVEGGGTVFEGESAELMFLFEGSPPFHATLFTPSGEVVFVPAMNDFRKSIRVSEEGTYTVSRVRDRFCEGVVDVRIAVTYRPRSTAHMSAPESMCAGDQVPLTLDVSGNFPVVLWLSVNDNPVALAFSEAGRTHHTLGECGSYSLLRIIDADGVVSALSQSLSVRCMGRPSGTVVARPGAAETEAFLEVALVEGSPPFCVTIEGPEGWNVAPDGSTVQTCDFVSASAVIPVYREGIYTLVGIRDAHCNSRPLNETAPVVFYPRPKAHVTAGPCVGDSVVVEVEGGGGYFVLRHWFDGNKLAHVETNTTERRIVITPPSDARTVSVQFVRDEIYAGGLVVAPDADTPSARNVFVDSVTSTATVRLEERPTARFACESCVPPGTDMPLVLTGRGPWRVEYRENNQTVALSAATTPTFIKAFPRTAYRLESVVDSACGEGSVDNYGAHTEASPSSRGTSRHHSNLMHGTREVFVIPSGGISGGGDVCDGEEAVVEVRLEGIPPYEVTYVVAGQVRTEKNVWTDSLRVPTTVGGVYQLVTIRDKYCSLATTTTSAPASARIGLDGGRQHHANRVDDDGGDHTEDEVTRSNRQRELIQQQVASDMLRGSAAAASADVLSSQSQSNGGPGDAGDDWSFGGVVRGLVVLCVLLGASALMIAHAAMLVQNR* # ORIGINAL: g2947.t1 original gene structure, not modified by PASA NODE_22434_length_103_cov_122.214_potentialcontaminant AUGUSTUS gene 1 103 . - . ID=g2947;Name=g2947.t1 NODE_22434_length_103_cov_122.214_potentialcontaminant AUGUSTUS mRNA 1 103 . - . ID=g2947.t1;Parent=g2947;Name=g2947.t1 NODE_22434_length_103_cov_122.214_potentialcontaminant AUGUSTUS exon 1 103 . - . ID=g2947.t1.exon1;Parent=g2947.t1 NODE_22434_length_103_cov_122.214_potentialcontaminant AUGUSTUS CDS 1 103 . - 1 ID=cds.g2947.t1;Parent=g2947.t1 #PROT g2947.t1 g2947 PIRAEIEDGVELKKKKAKKLATPMRKAIEEGVEL # PASA_UPDATE: g5595.t1, single gene model update, valid-1, status:[pasa:asmbl_4657,status:3], valid-1 NODE_2613_length_5662_cov_43.6016 . gene 666 2589 . + . ID=g5595;Name=g5595.t1 NODE_2613_length_5662_cov_43.6016 . mRNA 666 2589 . + . ID=g5595.t1;Parent=g5595;Name=g5595.t1 NODE_2613_length_5662_cov_43.6016 . five_prime_UTR 666 803 . + . ID=g5595.t1.utr5p1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 666 931 . + . ID=g5595.t1.exon1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 804 931 . + 0 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 1063 1168 . + . ID=g5595.t1.exon2;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 1063 1168 . + 1 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 1377 1559 . + . ID=g5595.t1.exon3;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 1377 1559 . + 0 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 1971 2085 . + . ID=g5595.t1.exon4;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 1971 2085 . + 0 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 2250 2394 . + . ID=g5595.t1.exon5;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 2250 2394 . + 2 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . exon 2509 2589 . + . ID=g5595.t1.exon6;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . CDS 2509 2542 . + 1 ID=cds.g5595.t1;Parent=g5595.t1 NODE_2613_length_5662_cov_43.6016 . three_prime_UTR 2543 2589 . + . ID=g5595.t1.utr3p1;Parent=g5595.t1 #PROT g5595.t1 g5595 MGTFAPVKIAVDEDFDAFKAIASSEDAAWTVRYEKGAIKIWTRSSDDSPINITRVKNHLEGIDASLVYDVLHDSEYRKHFDDVMIEGYEMIQLDECNDIGYYSAKLPPGITNRDFLNQRSWREYDNGEYIIINHSVEHELCPPKKNFVRANSILTGYWILPSDNGCTIIWVTQTDPRGSLPKAIVNHLTLHVAPKAMAQFREVCSKYTAWKLQNNPERKPWRKGWPQVALAPAPDH* # ORIGINAL: g5596.t1 original gene structure, not modified by PASA NODE_2613_length_5662_cov_43.6016 AUGUSTUS gene 4146 5560 . + . ID=g5596;Name=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS mRNA 4146 5560 . + . ID=g5596.t1;Parent=g5596;Name=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS exon 4146 4330 . + . ID=g5596.t1.exon1;Parent=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS CDS 4146 4330 . + 0 ID=cds.g5596.t1;Parent=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS exon 4765 4966 . + . ID=g5596.t1.exon2;Parent=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS CDS 4765 4966 . + 1 ID=cds.g5596.t1;Parent=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS exon 5438 5560 . + . ID=g5596.t1.exon3;Parent=g5596.t1 NODE_2613_length_5662_cov_43.6016 AUGUSTUS CDS 5438 5560 . + 0 ID=cds.g5596.t1;Parent=g5596.t1 #PROT g5596.t1 g5596 MRGSPSISHESSKGGGGFELTEIALDAPVASGAQHASSQPPKLNNASRGSAQNTSFGALMGSGLQRRKRDGEAQRVVEINRPDANLVFKYVGNKIVTSKYTVFTFLPRNLFEQFRRVANAYFLVLLILQLIPQIAALNYVTTAVPLIFVLAVTALKDGYDDYTRHKSDFE # PASA_UPDATE: g13085.t1, single gene model update, valid-1, status:[pasa:asmbl_4147,status:12], valid-1 NODE_2366_length_6557_cov_45.6151 . gene 160 957 . - . ID=g13085;Name=g13085.t1 NODE_2366_length_6557_cov_45.6151 . mRNA 160 957 . - . ID=g13085.t1;Parent=g13085;Name=g13085.t1 NODE_2366_length_6557_cov_45.6151 . five_prime_UTR 822 957 . - . ID=g13085.t1.utr5p1;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . exon 819 957 . - . ID=g13085.t1.exon1;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . CDS 819 821 . - 0 ID=cds.g13085.t1;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . exon 463 591 . - . ID=g13085.t1.exon2;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . CDS 463 591 . - 0 ID=cds.g13085.t1;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . exon 160 249 . - . ID=g13085.t1.exon3;Parent=g13085.t1 NODE_2366_length_6557_cov_45.6151 . CDS 160 249 . - 0 ID=cds.g13085.t1;Parent=g13085.t1;3_prime_partial=true #PROT g13085.t1 g13085 MPQYHWQSKAIKSAGLEDMVLLTKVDEASIVDNLKKRLMEDLIYTYIGSVLIAVNPFKNLPYFTENEIEQYQGA # ORIGINAL: g13086.t1 original gene structure, not modified by PASA NODE_2366_length_6557_cov_45.6151 AUGUSTUS gene 1728 3533 . + . ID=g13086;Name=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS mRNA 1728 3533 . + . ID=g13086.t1;Parent=g13086;Name=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 1728 1815 . + . ID=g13086.t1.exon1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 1728 1815 . + 0 ID=cds.g13086.t1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 1917 2153 . + . ID=g13086.t1.exon2;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 1917 2153 . + 2 ID=cds.g13086.t1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 2371 2445 . + . ID=g13086.t1.exon3;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 2371 2445 . + 2 ID=cds.g13086.t1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 2705 2784 . + . ID=g13086.t1.exon4;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 2705 2784 . + 2 ID=cds.g13086.t1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 3050 3130 . + . ID=g13086.t1.exon5;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 3050 3130 . + 0 ID=cds.g13086.t1;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS exon 3354 3533 . + . ID=g13086.t1.exon6;Parent=g13086.t1 NODE_2366_length_6557_cov_45.6151 AUGUSTUS CDS 3354 3533 . + 0 ID=cds.g13086.t1;Parent=g13086.t1 #PROT g13086.t1 g13086 MKVTRQKHARKILNFYKNKFGMREPYQVIVDGTFCQAALECRIHIKEQLPAYIGSHVKLMTTACVLEELRLLGDEFLGALLISRKYETRRCNHTKAAVAAGECIKSIIGEDNKDRYCVATQDNELKADLRKRPGVPIFYINYNCIVIEHVSDTSQQHSRAADATKLLPSTQDRAAFPVKRKASEMSGAGDAAAASGDTPKPKRKRPSAPNPLSVKRKKTAAAAKPPMKRPKKTDTTTPAPVAVNGN* # PASA_UPDATE: g4253.t1, single gene model update, valid-1, status:[pasa:asmbl_1163,status:12], valid-1 NODE_130_length_36736_cov_42.3983 . gene 17285 17808 . + . ID=g4253;Name=g4253.t1 NODE_130_length_36736_cov_42.3983 . mRNA 17285 17808 . + . ID=g4253.t1;Parent=g4253;Name=g4253.t1 NODE_130_length_36736_cov_42.3983 . five_prime_UTR 17285 17354 . + . ID=g4253.t1.utr5p1;Parent=g4253.t1 NODE_130_length_36736_cov_42.3983 . exon 17285 17503 . + . ID=g4253.t1.exon1;Parent=g4253.t1 NODE_130_length_36736_cov_42.3983 . CDS 17355 17503 . + 0 ID=cds.g4253.t1;Parent=g4253.t1 NODE_130_length_36736_cov_42.3983 . exon 17649 17808 . + . ID=g4253.t1.exon2;Parent=g4253.t1 NODE_130_length_36736_cov_42.3983 . CDS 17649 17733 . + 1 ID=cds.g4253.t1;Parent=g4253.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 17734 17808 . + . ID=g4253.t1.utr3p1;Parent=g4253.t1 #PROT g4253.t1 g4253 MATGSAEAKGECKANIPASTAQILPNGQDISKRPKPCCACGDTKKPRDTCIVEKGEVNCKDLIEAHKACMRGWGYDV* # PASA_UPDATE: g4258.t1, single gene model update, valid-1, status:[pasa:asmbl_1164,status:3], valid-1 NODE_130_length_36736_cov_42.3983 . gene 34205 34984 . + . ID=g4258;Name=g4258.t1 NODE_130_length_36736_cov_42.3983 . mRNA 34205 34984 . + . ID=g4258.t1;Parent=g4258;Name=g4258.t1 NODE_130_length_36736_cov_42.3983 . five_prime_UTR 34205 34247 . + . ID=g4258.t1.utr5p1;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . exon 34205 34403 . + . ID=g4258.t1.exon1;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . CDS 34248 34403 . + 0 ID=cds.g4258.t1;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . exon 34581 34699 . + . ID=g4258.t1.exon2;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . CDS 34581 34699 . + 0 ID=cds.g4258.t1;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . exon 34812 34984 . + . ID=g4258.t1.exon3;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . CDS 34812 34971 . + 1 ID=cds.g4258.t1;Parent=g4258.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 34972 34984 . + . ID=g4258.t1.utr3p1;Parent=g4258.t1 #PROT g4258.t1 g4258 MTHGKHVLQTARTIFTALTEGRGFDRVLRGVNITEAAEGRCVCEFVVGEDHVNRGGTLHGGLTATLVDIVSTIAIATTGSGAPGVSTGMNITYISAANEGDKIEVDAKVLRAGRTLAFATVDLRKVDGKIVAQGTHTKFVGSSK* # PASA_UPDATE: g4249.t1, single gene model update, valid-1, status:[pasa:asmbl_1170,status:3], valid-1 NODE_130_length_36736_cov_42.3983 . gene 4210 6011 . - . ID=g4249;Name=g4249.t1 NODE_130_length_36736_cov_42.3983 . mRNA 4210 6011 . - . ID=g4249.t1;Parent=g4249;Name=g4249.t1 NODE_130_length_36736_cov_42.3983 . five_prime_UTR 5885 6011 . - . ID=g4249.t1.utr5p1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . exon 5643 6011 . - . ID=g4249.t1.exon1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . CDS 5643 5884 . - 0 ID=cds.g4249.t1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . exon 5374 5512 . - . ID=g4249.t1.exon2;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . CDS 5374 5512 . - 1 ID=cds.g4249.t1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . exon 4929 5076 . - . ID=g4249.t1.exon3;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . CDS 4929 5076 . - 0 ID=cds.g4249.t1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . exon 4565 4710 . - . ID=g4249.t1.exon4;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . CDS 4565 4710 . - 2 ID=cds.g4249.t1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . exon 4210 4282 . - . ID=g4249.t1.exon5;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . CDS 4235 4282 . - 0 ID=cds.g4249.t1;Parent=g4249.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 4210 4234 . - . ID=g4249.t1.utr3p1;Parent=g4249.t1 #PROT g4249.t1 g4249 MAKLIPRSWTESLYRDTKFRGNEDEQENKLRESVTMYVGNLSFYTKEEQIYELFSKCGEIKRIIMGLDRFKKTPCGFCFVEYYTRPESEFCMKYVNGTVLDDRVIRTDWDAGFVEGRQFGRGRSGGQVRDEFRSEFDEGRGGFGRSYGAETAADPHLFNPAMYNPTAVRRPRQHDGGRKRYQDDRHEDEGNSAKRRRESMPEDTHEQAIDAADKDKDKEKEKESKNPRFDRQRDSDDEDA* # ORIGINAL: g4248.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 301 3768 . + . ID=g4248;Name=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 301 3768 . + . ID=g4248.t1;Parent=g4248;Name=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 301 562 . + . ID=g4248.t1.exon1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 301 562 . + 2 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 909 1042 . + . ID=g4248.t1.exon2;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 909 1042 . + 1 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 1439 1617 . + . ID=g4248.t1.exon3;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 1439 1617 . + 2 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 1912 2246 . + . ID=g4248.t1.exon4;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 1912 2246 . + 0 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 2893 3035 . + . ID=g4248.t1.exon5;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 2893 3035 . + 1 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 3325 3410 . + . ID=g4248.t1.exon6;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 3325 3410 . + 2 ID=cds.g4248.t1;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 3703 3768 . + . ID=g4248.t1.exon7;Parent=g4248.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 3703 3768 . + 0 ID=cds.g4248.t1;Parent=g4248.t1 #PROT g4248.t1 g4248 ASVYGPVTLLRASEVADVIDGDADQYKEYPQPQLVFRNDATTTSTVAFHRSAMEVYDGAPFPANATHDQKMACIARQIRNPFGPMFSAPGVGQHADGIAQVAQLPEVLVPIRLELDAAGYKLRDVFTWNLNDTVISPDTFAAMLCAELELPRASFAEAISASIKGQLEQYAGAAAVEIPEEFSEDTRMLVKVNVQVGNNLLSDKFEWDVAVSEEITAEDFARKTCSEVGLGGEYVSGMAHAIREQAVWHKRALLNGAPPNDVGDLAFPPVRLGDEAEEWVPVVDQLTEAEIERIQQAREREASRLPGVGPIPGGPVTHYATGAPISIGHFDGGDGYNKKKFRKGDGIKLREVSVDWRCRNCGCTAASTPVLRRGPEGSNTLCNACGLVWRVRGRMRDVDK* # ORIGINAL: g4250.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 9588 11517 . + . ID=g4250;Name=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 9588 11517 . + . ID=g4250.t1;Parent=g4250;Name=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 9588 9605 . + . ID=g4250.t1.exon1;Parent=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 9588 9605 . + 0 ID=cds.g4250.t1;Parent=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 9748 10002 . + . ID=g4250.t1.exon2;Parent=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 9748 10002 . + 0 ID=cds.g4250.t1;Parent=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 10222 11517 . + . ID=g4250.t1.exon3;Parent=g4250.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 10222 11517 . + 0 ID=cds.g4250.t1;Parent=g4250.t1 #PROT g4250.t1 g4250 MYGFTKRPARPNQSHLYLCTFTHPLFIRDRPDMWEHIRRGMARGSPGTSANEAASAHEEEASIIREEYTAAYRETIQPILDRVQALHAMLQRLKADMAEMATRQERHNDWQASIFTDFILPAAANNSAAAALLRDSELDGIATATPLDEQSLQFQQAQAQAQAQAQAQAQAQAQTPRPQPQPVSSPLRESAPNNNNNNSNNNNINNNNNNNGINRRRSTSSPRATNSQSNGTRNGGSAASSPSRSARNSRTMQRQPSSAQGPVSARNLFGTSSTPSSPLMGSASLSHTLAHQANMTMPAAHNGQRLPGVSSVPSSPRLPAVSAGGFAFGSPYTMEGSLNSTPFVSHAHQQQQQQASHVLELQRRNLQFQQQQQLQQQQLQQQRLHLQQLQQQQQQMHSAHVYDYQPPQGPATDHGLYVPATQNELPYFHSQAAVVARGQEIAQMLNEVYRRSLIRDHMSVDIGSINENEFDDKVREVQQHVQEAWSEFTGEMFGRSADVLEIMQGSDRAGGNGPSGPSVRYE* # ORIGINAL: g4255.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 22333 23799 . - . ID=g4255;Name=g4255.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 22333 23799 . - . ID=g4255.t1;Parent=g4255;Name=g4255.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 22333 23799 . - . ID=g4255.t1.exon1;Parent=g4255.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 22333 23799 . - 0 ID=cds.g4255.t1;Parent=g4255.t1 #PROT g4255.t1 g4255 MAAMASLPIEVLVEHVVPFLGPADLLSLSRTSAFLRSQLRGLCRFALTAPNARRFYEDADFRSLVDSVIPKELLVIRFVRPDSVLTNLVWCRNAIVDVSPLGGVHTLYLTGCAKLVNVSALGGVHTLHLVSCDDLVDVSSLSGIHTLNLSYSSRLADVSALRGVHTLDLAGCESLVDVSALGSVHTLILSYCRQVVDVSSLGGVYSLDLAGCDGVTDISGLGGVHTLSFGYCNDVLDVSALGGVHTLNLMYSYGLMDVSAFGGVHTLNLEGCYRVVDVSALGRLHNLNLSKCNGIVDVSALGGVGTLNLRGCNGVVDVSALGGIHTLNLRGCNGIVDVSALGGVHTLNLRGCNGVVDVSALGGVHTLNLRECNGVVDVSALGGVHTLNLRGCNGVVDVSALGGVHTLNLQECSGVVDVAALGGTHTLHLGCCHAVMDVSALSCVHTLNISRCVAGGDVSNLGSVSQLNVDTCRATGFPIMKMLRHPRV* # ORIGINAL: g4259.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 35420 36523 . - . ID=g4259;Name=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 35420 36523 . - . ID=g4259.t1;Parent=g4259;Name=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 36443 36523 . - . ID=g4259.t1.exon1;Parent=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 36443 36523 . - 0 ID=cds.g4259.t1;Parent=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 36019 36185 . - . ID=g4259.t1.exon2;Parent=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 36019 36185 . - 0 ID=cds.g4259.t1;Parent=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 35420 35861 . - . ID=g4259.t1.exon3;Parent=g4259.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 35420 35861 . - 1 ID=cds.g4259.t1;Parent=g4259.t1 #PROT g4259.t1 g4259 MDIICAAQYNLGMAHFTGHGVPPSEAEAEKWWLRAARDGKAEGSADAQGMLGMLYSTDDFRDLTKAFKWHLAAAHNGNVRSMGIVGFMLQMGAGTSPNESSAVAWYKRASAENTSAAVFSRANLAGYYYSRRMRTNAEEWARKALAAVDIEGAVRRASKQEPATDDYERKGLAIACFYLARCLEHGTSVFHRGPVTTQRDEAHRWYTRASTLDADVFAQLSRKLMSGCS* # PASA_UPDATE: g4257.t1, single gene model update, valid-1, status:[pasa:asmbl_1172,status:12], valid-1 NODE_130_length_36736_cov_42.3983 . gene 31630 33656 . - . ID=g4257;Name=g4257.t1 NODE_130_length_36736_cov_42.3983 . mRNA 31630 33656 . - . ID=g4257.t1;Parent=g4257;Name=g4257.t1 NODE_130_length_36736_cov_42.3983 . exon 33451 33656 . - . ID=g4257.t1.exon1;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . CDS 33451 33656 . - 0 ID=cds.g4257.t1;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . exon 32407 33346 . - . ID=g4257.t1.exon2;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . CDS 32407 33346 . - 1 ID=cds.g4257.t1;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . exon 31630 32203 . - . ID=g4257.t1.exon3;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . CDS 32042 32203 . - 0 ID=cds.g4257.t1;Parent=g4257.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 31630 32041 . - . ID=g4257.t1.utr3p1;Parent=g4257.t1 #PROT g4257.t1 g4257 MAPIRNTLKTLMGKKGRGVMLSAADVWLKRELERALGAVVGSREFFSFAPSLTEAIIDRLAAYIAHNRLAEYRQETTPCQCAECGEVRLHRETYAAAAARHGHDKWTPSEPRQCSGKVYQTKLFTSALDVTDPRFVQYLRLIDDLPQRCIGTAATFVCPEYCQEFTCGIKMKGGCVCPVVITALRAAGEDIKHQELQHPDSHGKHFECELCGAAFHHAAKHVTRVGNALRAVASVYAEHRADYRAAVSARMAAFVLEAPGLDKTLFRTAWERVHPLGIAADPLPMPLPLPSYLHGDGCGHVSSDDTNSDSILDSISADEKDMTAHWTNDCSDDDTVFAMSSPSSLSSEFLEGPLSESDDRSDDPFSWVFATNSDEFIKGLLRMGCATEAEDHCNNNDAIPQSIMNTNFMPRKNDLTYNTEYTAGVASIAQQLRCL* # ORIGINAL: g4254.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 17955 21399 . - . ID=g4254;Name=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 17955 21399 . - . ID=g4254.t1;Parent=g4254;Name=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 20207 21399 . - . ID=g4254.t1.exon1;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 20207 21399 . - 0 ID=cds.g4254.t1;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 19550 19906 . - . ID=g4254.t1.exon2;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 19550 19906 . - 1 ID=cds.g4254.t1;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 18503 19434 . - . ID=g4254.t1.exon3;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 18503 19434 . - 1 ID=cds.g4254.t1;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 18242 18320 . - . ID=g4254.t1.exon4;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 18242 18320 . - 2 ID=cds.g4254.t1;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 17955 18009 . - . ID=g4254.t1.exon5;Parent=g4254.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 17955 18009 . - 1 ID=cds.g4254.t1;Parent=g4254.t1 #PROT g4254.t1 g4254 MDDETHATGYTSDCSWEGLDSADGDGSDAYPCTITQRGNSVENGATGHGVGGQSTAASNAHHQRTREAEECSMVARVSLNPDKAGLTGVDVAHVNRVILEASRGSRFFENEKRKDARVTQRIASLQGTLERLHAADAKDPSALQQTMKAIDAQVMQLESSRELTRTIVHIDMDAFYAAIEILEKPELADKPMAVGGLSMLSTSNYAARKFGVRSAMPGYIGLRLCPELIILPPNFDKYRAYSERVRAVLRDYDPRYVPMSLDEAYVDITDYLRRTGLDAGEAVDQMRRRIHNETQLTASAGVGANTMIAKVCSDMNKPNGQFILPSTREDILGFMQTLPIRKICGIGKVTERMLRALGIEVCGELYNRRSDLSRLFSPISFHFFLSVALGIGTTVFARDTPRKSMSVERTFAPIESKVALSEKCRSLCTSLSEELAAESLRCRTVTVKLKTVEFVVKTRAMSLRGAVSSAEGLYAAAWRLIQTEMKACTGPLKLRLMGIRASALEGEGVRGKTDIARFFQHQGKKDKRSSIRQSPEEDGDGSEGVTAGAINNAGAVGSAVGVHAEDEADKDDWFASEWHCENDEDDDVIDRNDDGADEDIDAGAGNDVLDALHGSAAQGYSPGTAVARSDMGHVSECVREMDHDAPDGDRHSIDGDASRGVPKAAIANPYKTPKNPYVNARKAFRKDYDGGDGNVSLDAGRKKARTGFYGAPATNRADAGGVGVCAFDANSVLSSLPSGNEASVRDLDTTGTVATPLKRKGVDAGTHESEDALRDISHVQASASVLFYQCPVCLIARDYDSEAAAARHVDACLGNAGVHELLDKELKERLAERTETPGPAHKRRKAVARAGTTGQEASTHKQRTLQAFFRG* # ORIGINAL: g4251.t1 original gene structure, not modified by PASA NODE_130_length_36736_cov_42.3983 AUGUSTUS gene 13202 14985 . + . ID=g4251;Name=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS mRNA 13202 14985 . + . ID=g4251.t1;Parent=g4251;Name=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 13202 13247 . + . ID=g4251.t1.exon1;Parent=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 13202 13247 . + 0 ID=cds.g4251.t1;Parent=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 13355 14610 . + . ID=g4251.t1.exon2;Parent=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 13355 14610 . + 2 ID=cds.g4251.t1;Parent=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS exon 14815 14985 . + . ID=g4251.t1.exon3;Parent=g4251.t1 NODE_130_length_36736_cov_42.3983 AUGUSTUS CDS 14815 14985 . + 0 ID=cds.g4251.t1;Parent=g4251.t1 #PROT g4251.t1 g4251 MDACLKALSKPHDSRVLAQLGGDAVAALLYDATALALGAICSAGGRLESSLLITSSLERSLALASCVADACHEHLYIGHWKDVPIEWRVCYARAAAVAALASAALDRDADAIKWCDLGLLLGARLENALGGADLLSSFATELQRKLHGITGVKRPRAERGDEPSSVEDQTVPADTDAVMRAEHCLSRNEEAAFDAAILRGMSSGHAMSSVRGTFTVDPTRAIPSERLPSMERFLTCAVLPRRPHVITGCIDHWPALTGGRWADPNYLVAVAGHRTVPVELGSKYTDDEWSQQLMTFREFVDVHVRARVEGGIASTRGPVGYLAQHTLFAQVPELRRDIAIPDYCMLTRAGGGDGFGDGCSGDGEEAEEGNESGDGGGVDVNAWYGPAGTVSPLHTDPKHNLFAQVVGRKYVRLYAEEHSAAMYPAGGLLGNTSQVDLDNPDTARFPLFSKAPYLECILCPGDMLYIPPRCWHYVRSLDVSFSVSFWWSIS* # PASA_UPDATE: g4256.t1, single gene model update, valid-1, status:[pasa:asmbl_1165,status:12],[pasa:asmbl_1166,status:12],[pasa:asmbl_1167,status:12],[pasa:asmbl_1168,status:12],[pasa:asmbl_1169,status:12], valid-1 NODE_130_length_36736_cov_42.3983 . gene 25018 31481 . + . ID=g4256;Name=g4256.t1 NODE_130_length_36736_cov_42.3983 . mRNA 25018 31481 . + . ID=g4256.t1;Parent=g4256;Name=g4256.t1 NODE_130_length_36736_cov_42.3983 . exon 25018 31481 . + . ID=g4256.t1.exon1;Parent=g4256.t1 NODE_130_length_36736_cov_42.3983 . CDS 25018 31203 . + 0 ID=cds.g4256.t1;Parent=g4256.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 31204 31481 . + . ID=g4256.t1.utr3p1;Parent=g4256.t1 #PROT g4256.t1 g4256 MQDPIINQQAMRALVRALGGVDANEAVAALASEDGGKRLDELTSCPFVAQPRTENAYSFVGVIVPLLMIVVDNKFRQTAYATSLQKVWPRLSNAEFITRAVECACTDGLQPTSSWAREDREFWERCGQARGVAGLVAQFIFTLLRYERDVQADIQFEEWVKRIERRAPGSPWVVHLRAIVDEANKKSLEKCAAAAAATALRAKSLRASQASSPPGGRHDNDHRDFRATRIEPTQEEILTHARPYLPRVDEEMPHATSDVGALLERHARLMREDMVVPLRRGVRAFLDVAVAPFKKASGSQRVKVNACKDDELFGGRGGGQHEMGITALRHARFERIVTDKRKGPIVMISFDQMTSLSAKGKRERVDFWREHGLTPDSLVCIAANVRFNSEDGPPGLVFATVCAPIPPHDDSKWEALYGGDRCFIHVTPLDLKRDVSRLIALSEPTARGAENFVLQIQGHFYAGYKYVLSVLQSPLTDTYPILHTLASADTGMHTPQTNPLSNPEFFSRGTCVGISALLKDNAPAGTAQHVTIDSYDGVREQLRAILPVIRIDGTQVDAVAAILTRKIALIQGPPGTGKTHVGAIATKMILDHSIQMRAGLGMHRGAANGAIAIVPTPILCICYTNHALDQYLEALHMKEGVPLENIVRIGGRSRSELLARRNLFTLERESLSNTTHGERARYAKLSREMDSLAKEIEEHEEMATLQLETASWNCVSEVFSVLDPVNHARVSGQDGDFVSVGDVNKRWKKWVQGWVPKTTAAHAERQRKVSRERVNQFSAIGESADNGGDAASSDGDAAVTEDHFGQLWIVPVAERRRTAMACIETIRLGAIKQLTQALSAYQEKSNEIAELKNVSAIRLLSKATVIGMTTSGCAKHASILQALEPPVVLCEEAGEVLESHVIASLSYGTKQLILIGDHKQLRPKVEYELSVESKRGYDLDVSLFERLVRIGEQGTTASKDNDGGCSDGDAEESVVGAETQARGAWHVTLDSQYRMRPEIAHLIRSTIYPTLCNGDNVASYPNARGFGRNLLFFDHDTPESKGGGAGLRSPKSYTNEFEAEMVVQLIRYAVKQGYKPDDIAVLATYTGQLLVLREKLTRERMMVRLSDGDAEELGLALFDGEESTTNTDMDSTRSAGAKGRGSVGKGKQDNANRKAGLNKEDDGGPTAVSLRECVRLSTVDNFQGEEALLVFVSTVRCNDKGQIGFLKTSNRVNVMLSRAKHAMYVLGSSRTVDKRQGESMFKSVLQLLRDGNAVVRSIPLRCDNHQTITEVSTPTQIRSFCKDGGCTLSCNARMKCGHKCALTCHPDNRDHDPAGVCNETCMRLLRPCQHPCPKLCGEKCPTKCNKIEKRTLLCGHTKDAKCHEVVATLKCDVSVDVMFPSCGHAGKVKCCLRSEFEELCKAIADGSKAAVHLDEANKAHIFDCCTPCGQGRDPCAHMCKSMCGACTRATALALAEDSGDVRISRLHARTSHAGLCKEHCTRTMSLCGHPCGGGSCHTASECPPCPKNCRIACAHSRCTEQCSVACAPCAEAECVWACTSDHPGGGRLACLHPCAVPCERLPCDHRCSKTLLCGHTCPCVCGDRCADEKHCPECARNNGGDNGNCVVELIMSTTLADHTVNDPPLVILACNHAFTTEHLDMQLGMDMFYRRDPSDGKWISTKDISAITDNELDDLAKRATCPLCRVPISGVLRYGRPLKAIEMRRAGILFLRKAQVAAAAYEQEAQCVRAQVDDDSTHMTGDSDGIKKALKTALSMHKTLQQCINDAEASIRNSPPKRVYELEVIASQRVGAAPSLRDAPLWQPVCRLYMAALRCATASLAISGVVVRRMSIAARDPVAQSPGRTAGKKQPGATGLTAATNAVKKAYEMLVDVSNNHSRASRESGARVECERGLLVAVEGHLVMAEIASQVAALEDEYMRRALAAAKSALADVGNASLLQAREELNGMLKRIEKAKKSLTIEEKRAVFAAMSGMGGYGVGSFGGHWKSCPNGHVYYVDACGGAMQQSKCPDCDAVIGGHNHTLAEGNGIATQFLADVGGELPPPNWEANANVIAHGIHGFF* # PASA_UPDATE: g4252.t1, single gene model update, valid-1, status:[pasa:asmbl_1171,status:3], valid-1 NODE_130_length_36736_cov_42.3983 . gene 15282 16910 . - . ID=g4252;Name=g4252.t1 NODE_130_length_36736_cov_42.3983 . mRNA 15282 16910 . - . ID=g4252.t1;Parent=g4252;Name=g4252.t1 NODE_130_length_36736_cov_42.3983 . five_prime_UTR 16863 16910 . - . ID=g4252.t1.utr5p1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 16841 16910 . - . ID=g4252.t1.exon1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 16841 16862 . - 0 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 16569 16658 . - . ID=g4252.t1.exon2;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 16569 16658 . - 2 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 16198 16401 . - . ID=g4252.t1.exon3;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 16198 16401 . - 2 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 15972 16059 . - . ID=g4252.t1.exon4;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 15972 16059 . - 2 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 15646 15793 . - . ID=g4252.t1.exon5;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 15646 15793 . - 1 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . exon 15282 15417 . - . ID=g4252.t1.exon6;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . CDS 15298 15417 . - 0 ID=cds.g4252.t1;Parent=g4252.t1 NODE_130_length_36736_cov_42.3983 . three_prime_UTR 15282 15297 . - . ID=g4252.t1.utr3p1;Parent=g4252.t1 #PROT g4252.t1 g4252 MKIIGLTGGIASGKSTVSSLLDKQNVPIVDADRIAREVVEPGRPAWRDIVRNFGEGVLKADREIDRDKLGQIIFADATKRAVLNKCTHPYVLREMFKQIAWHFICGRRFIVLDVPLLFENVKALKMVHATVVVYCTPDVQLQRLMDRNQMSEHDARQRIAAQMPLDDKRKRADYVIDNSGGRDELDAKVLAMLKAVTPRFAVTSIHVAVVLFTAGVVLYQLWK* # ORIGINAL: g12632.t1 original gene structure, not modified by PASA NODE_2976_length_4621_cov_43.7646 AUGUSTUS gene 801 3929 . + . ID=g12632;Name=g12632.t1 NODE_2976_length_4621_cov_43.7646 AUGUSTUS mRNA 801 3929 . + . ID=g12632.t1;Parent=g12632;Name=g12632.t1 NODE_2976_length_4621_cov_43.7646 AUGUSTUS exon 801 3929 . + . ID=g12632.t1.exon1;Parent=g12632.t1 NODE_2976_length_4621_cov_43.7646 AUGUSTUS CDS 801 3929 . + 0 ID=cds.g12632.t1;Parent=g12632.t1 #PROT g12632.t1 g12632 MSISRDLSKFVRSFWRNRIRAATFTTLFCFVLLGLHDGDPYWVRPRGDDLDEDEGLYNDADANNLVLAQLEKEIDLVGPDELQRSNDHVADFFARARRDKQVESVRGAAEGDGEIIRPRFDAADPSSAESKPEAYVTHAFDERDGTYAAIEIVSHRLRVNWRTKRQLVVLVLPTMSAAGRKRIELGGGCVVVVEPVRANATTCGIDGGARSLSALWAFALVDFSRVVFLDPFTAVMKPIDILFSCLATADMPCAPHARIPPDSFETHVLTIVPNSRVAGNILASIDSLADAVDCTFTAVLNVYFGGWFRERTVRLAASSFPANMAERGDAYFARVRNTALIAYTPVDRGDGTFDTSSPAMNAELAVFRVKTKTYIMGWALFKCSLPETLLSAKRAIADVVQHADASVIAGREWRPAESWLASRGTENVVRKDRPNVAYVTYVQNSDARTVLRITALAAALMKESPGIPFIALALHSLGPVTLEALRFAGVTIRKVDPVMRRSSLDTICAEVDATSRQTSVGDWTMLRAWQLTEYERVLYIASDCIVVGKVAAVWDALGDPIAAVNSVHTTGAFDDGVILIKPSDSAFGGLASRVETGHAHCNITDFLNSFFSKWSRYSIANRLPFEYNMPLDALQAASPHVRERWLCARPPRIVRVGTSSSSSRSSDICGVQQGKVLEVITDKLRTTVRGRVREFRRITIASVQETILGTLSAHFSDAAKPFAVVNHPDHDAVGDATLWIGLERVFSKFSVRPAYTCSADGLHAESVGLCDTTTLQVNIGDGVIVSFGFDVEPQQAVVGKAKGGSGRRGLLDLLSSLHKRNELIVFAQLNDFPPIGSPALASLSGALAAQTTGVVVYVPDAIVLALCIAALPSASCKVCPDLTYMVAGELPPADGPSPSGSNLRAAVWIKATGVDRKDVEVARRGSVMSPNVTWSEEDVRVTDWSHMPMQEAHGYTQQARVRLKQLTSMLAEGRMVITDDPHALLYAFVSEVPLVGIRTNEATNGALLSLVGEGKKADYNTGVFSARSAEEAVKMAAKMTWL* # PASA_UPDATE: g5389.t1, single gene model update, valid-1, status:[pasa:asmbl_90,status:12],[pasa:asmbl_91,status:12], valid-1 NODE_1026_length_14563_cov_43.7765 . gene 13278 14308 . - . ID=g5389;Name=g5389.t1 NODE_1026_length_14563_cov_43.7765 . mRNA 13278 14308 . - . ID=g5389.t1;Parent=g5389;Name=g5389.t1 NODE_1026_length_14563_cov_43.7765 . five_prime_UTR 14264 14308 . - . ID=g5389.t1.utr5p1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . exon 14217 14308 . - . ID=g5389.t1.exon1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . CDS 14217 14263 . - 0 ID=cds.g5389.t1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . exon 14070 14128 . - . ID=g5389.t1.exon2;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . CDS 14070 14128 . - 1 ID=cds.g5389.t1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . exon 13763 13944 . - . ID=g5389.t1.exon3;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . CDS 13763 13944 . - 2 ID=cds.g5389.t1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . exon 13278 13589 . - . ID=g5389.t1.exon4;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . CDS 13536 13589 . - 0 ID=cds.g5389.t1;Parent=g5389.t1 NODE_1026_length_14563_cov_43.7765 . three_prime_UTR 13278 13535 . - . ID=g5389.t1.utr3p1;Parent=g5389.t1 #PROT g5389.t1 g5389 MADKGTKRKADQELPKSQEVKKTRPDPEEDPEGSEEEEDEDDEEGSEEGDEEDEEDDDEEDDDEEDDEEGDEDDDDEDEDEDDEEDEEAPKGKRKEGEAEEEDDEEDDDEEDD* # PASA_UPDATE: g5385.t1, single gene model update, valid-1, status:[pasa:asmbl_88,status:3], valid-1 NODE_1026_length_14563_cov_43.7765 . gene 4596 7244 . - . ID=g5385;Name=g5385.t1 NODE_1026_length_14563_cov_43.7765 . mRNA 4596 7244 . - . ID=g5385.t1;Parent=g5385;Name=g5385.t1 NODE_1026_length_14563_cov_43.7765 . five_prime_UTR 7120 7244 . - . ID=g5385.t1.utr5p1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 7071 7244 . - . ID=g5385.t1.exon1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 7071 7119 . - 0 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 6901 6977 . - . ID=g5385.t1.exon2;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 6901 6977 . - 2 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 6602 6796 . - . ID=g5385.t1.exon3;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 6602 6796 . - 0 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 6248 6501 . - . ID=g5385.t1.exon4;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 6248 6501 . - 0 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 5653 5926 . - . ID=g5385.t1.exon5;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 5653 5926 . - 1 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 5395 5549 . - . ID=g5385.t1.exon6;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 5395 5549 . - 0 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . exon 4596 5274 . - . ID=g5385.t1.exon7;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . CDS 4716 5274 . - 1 ID=cds.g5385.t1;Parent=g5385.t1 NODE_1026_length_14563_cov_43.7765 . three_prime_UTR 4596 4715 . - . ID=g5385.t1.utr3p1;Parent=g5385.t1 #PROT g5385.t1 g5385 MGNGASSARVHPDDGQVAADASPLEVIDVRARKLESQIASLQAELLAIKTTVGNVVTGVDDMRTLLKTTSTGGSRPSQLLQKQNSSAVGGGLLSPSSFEFVELGDVPLQEYPEQVLLGPMKLDHFEGIHKLPTAVPIRGKKMDRSHVAEQVIPGVANFRKVSGFPVFGVFQCTVDGIRAVVEHLEGQGFKKIRWANMREEPVVFVNGLPFAPREEGRLNDNVDYLLGVTGPELERMELRLKRDVAERARENGGMFEYYHQKLDMSNELRKVPFDPAQCTTLHEVYGELVSNGHDVNYRRIPIQDECAPERQALDDIVRLSRDCDEETALVFNCQMGRGRTTTAMVCACLLYRIQNPHKFGQGVTYRGDASVQRFKRKMSAFNVQQSAHSIQNLERVGSASLKDDEPEYECVTALGVVLDNGAKIKEEVDDIIDLCSHMQNLRSAIQECKESAENAGKGGEGRGPGFWYHRGNNYLQRYWFLIVFNAYLHYVAPTNYEPSFSRWMRERWGLKRMMKTIELK* # ORIGINAL: g5384.t1 original gene structure, not modified by PASA NODE_1026_length_14563_cov_43.7765 AUGUSTUS gene 3001 3981 . - . ID=g5384;Name=g5384.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS mRNA 3001 3981 . - . ID=g5384.t1;Parent=g5384;Name=g5384.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 3001 3981 . - . ID=g5384.t1.exon1;Parent=g5384.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 3001 3981 . - 0 ID=cds.g5384.t1;Parent=g5384.t1 #PROT g5384.t1 g5384 MVRRALSTVVVAAAVLMNMCGHVGAQRDALAGIAAPPSPSPPAIGDIGRACGGATHVFPNDARHLQIDDRIIRASFGKSTLLAACEGSSSASGVALECGKNSLPVLANVAIVAVFAVVEYMNLLGTSGISVGALVAVLAVLACRVKSSPSSNEESRFVCVEDDEDETASVSDDQEPGGERDEMDAVCVSVVDTSVEHVTKRRRRSSTSSDSGVEMSDDEESLGASVLDDMVSHVHDELDVSSTSTCLSELASLTVAAAADSCAEADALIFGEFEDDVEDDEDFALALRLASAPVPSTGKMACPDDLRAFLVSAARNGFGPSKAIVA* # ORIGINAL: g5388.t1 original gene structure, not modified by PASA NODE_1026_length_14563_cov_43.7765 AUGUSTUS gene 11973 13153 . + . ID=g5388;Name=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS mRNA 11973 13153 . + . ID=g5388.t1;Parent=g5388;Name=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 11973 12043 . + . ID=g5388.t1.exon1;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 11973 12043 . + 0 ID=cds.g5388.t1;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 12329 12452 . + . ID=g5388.t1.exon2;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 12329 12452 . + 1 ID=cds.g5388.t1;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 12658 12822 . + . ID=g5388.t1.exon3;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 12658 12822 . + 0 ID=cds.g5388.t1;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 12947 13153 . + . ID=g5388.t1.exon4;Parent=g5388.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 12947 13153 . + 0 ID=cds.g5388.t1;Parent=g5388.t1 #PROT g5388.t1 g5388 MAAMLAYLSWAATISTLFLFGSSCCVFWIKYGILIMDITVQRVNFVGLLFAIYYILTYYGCSSDKTQVIAPLLAGLALVAAVLILPMKLFLLTHDTATFWMGLVASGASILMFASPLSLAAKVVRTKSTEGMVATLSWMSLLASALWLLYGIATADRFIAVPNGIGCFMAFLQIMLLCKYRRNANSPM* # PASA_UPDATE: g5387.t1, single gene model update, valid-1, status:[pasa:asmbl_92,status:12], valid-1 NODE_1026_length_14563_cov_43.7765 . gene 10154 11736 . + . ID=g5387;Name=g5387.t1 NODE_1026_length_14563_cov_43.7765 . mRNA 10154 11736 . + . ID=g5387.t1;Parent=g5387;Name=g5387.t1 NODE_1026_length_14563_cov_43.7765 . exon 10154 10306 . + . ID=g5387.t1.exon1;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . CDS 10154 10306 . + 0 ID=cds.g5387.t1;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . exon 10425 10618 . + . ID=g5387.t1.exon2;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . CDS 10425 10618 . + 0 ID=cds.g5387.t1;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . exon 10720 11736 . + . ID=g5387.t1.exon3;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . CDS 10720 11671 . + 1 ID=cds.g5387.t1;Parent=g5387.t1 NODE_1026_length_14563_cov_43.7765 . three_prime_UTR 11672 11736 . + . ID=g5387.t1.utr3p1;Parent=g5387.t1 #PROT g5387.t1 g5387 MGWVRSVRAQKAATFVELNDGSSLRGCQVVLEARDTPGMATGSCIKVTGKLVASIGSRQSNEVQGETVHVLGASDGTYPLQKKRHTLEYLRDIGHLRPRTNTQGAVLRARNAIASAVHEFFQQNNFVHVHTPILTGNDCEGAGELFKVAPTGDVRPGDDFFGRPVYLTVSGQLHAEIIAAAVGRAYTFGPTFRAEDSKTSRHLSEFQMVEAEIAFAGSHVAMDVAEGCVRHAGRAFASRCADDLAFFVERINPKLKEVFGTLDRPFARISYKEAMAVLKAHTDAQATKGRQAFDKPVEWGIDLGAEHERFIAETHVGGPTFITDYPASIKPFYMLDNGDGTVASFDLVVPEIGELVGGSAREDRLDVLMERLRELGPQAVADLSWYADLRRYGSFPHAGFGVGFERLVRLLTGMENIRDVAPFPRHPGTCAF* # PASA_UPDATE: g5386.t1, single gene model update, valid-1, status:[pasa:asmbl_89,status:12], valid-1 NODE_1026_length_14563_cov_43.7765 . gene 8508 9648 . - . ID=g5386;Name=g5386.t1 NODE_1026_length_14563_cov_43.7765 . mRNA 8508 9648 . - . ID=g5386.t1;Parent=g5386;Name=g5386.t1 NODE_1026_length_14563_cov_43.7765 . five_prime_UTR 9556 9648 . - . ID=g5386.t1.utr5p1;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . five_prime_UTR 9381 9389 . - . ID=g5386.t1.utr5p2;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . exon 9556 9648 . - . ID=g5386.t1.exon1;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . exon 8866 9389 . - . ID=g5386.t1.exon2;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . CDS 8904 9380 . - 0 ID=cds.g5386.t1;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . exon 8508 8720 . - . ID=g5386.t1.exon3;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . three_prime_UTR 8866 8903 . - . ID=g5386.t1.utr3p1;Parent=g5386.t1 NODE_1026_length_14563_cov_43.7765 . three_prime_UTR 8508 8720 . - . ID=g5386.t1.utr3p2;Parent=g5386.t1 #PROT g5386.t1 g5386 MATILRTVARMGCNVSLRRLHAVSIHRQWNSDRRDDGITEWPRGAVGDNDVVIPPIPPIVRTGESLDKKRARLLYQSRKRGILENDLLLSTFFGTHGDKLTAAQLDEYDRLLDQVDWDIYYWMTKARPVPAEFDTDLMRALQEHAENKGKKIMRQPEI* # ORIGINAL: g5383.t1 original gene structure, not modified by PASA NODE_1026_length_14563_cov_43.7765 AUGUSTUS gene 212 2612 . + . ID=g5383;Name=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS mRNA 212 2612 . + . ID=g5383.t1;Parent=g5383;Name=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 212 958 . + . ID=g5383.t1.exon1;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 212 958 . + 0 ID=cds.g5383.t1;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 1173 1477 . + . ID=g5383.t1.exon2;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 1173 1477 . + 0 ID=cds.g5383.t1;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 1745 2176 . + . ID=g5383.t1.exon3;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 1745 2176 . + 1 ID=cds.g5383.t1;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS exon 2324 2612 . + . ID=g5383.t1.exon4;Parent=g5383.t1 NODE_1026_length_14563_cov_43.7765 AUGUSTUS CDS 2324 2612 . + 1 ID=cds.g5383.t1;Parent=g5383.t1 #PROT g5383.t1 g5383 ATILQRCATYLVQVRKTLLRMQKDNEVLRLENAHLTGENAQLRALLDESTYGMLHPASAVASMHTFAPGRTCFPLVPAVATATPNPLRLRCLAPVSPGAVAGQPQVPMGPLSQSSVHPSCLDDLMLELEYSLGEGGVFTSASASESASAYESASASVGDDASLSAACASPSSAEASLMDSPSLPVRPTAGQGAAAVASRAMGAPPHAPAAAAAGRHKSRAINTQAEAIELGLPAGTRRPSSYADQQVLMLLCAFFLIFPTVGLFNPEEADRPSQHIPGPGRELHSLSALTDVAGGIFRSRVALHMLLCFRSLAVMVIARIFLLGMDPAISAGAEALERASKLRRKGDVAFTLDQYAEAKQYYLRALAELGHSRPDPRGYSVYIYTIVQVGHHKLRWWRLGRWVDSAFHAIARTVSVVDFATTYWELARMYHGLHLVECLHDGLNMSSVYSAFRSINYAESAESTDRPGNPLLSEICCSVAFVLDRLFPQFQYLPRVYTHMAQRRAMLYGTAHVIACRATLARQQREGHRCRIPALPGLLLMLVMLVACTLCQMTTYAFSSHTYRDNTLLHTLMIFPSILFFPLAVLATAP* # ORIGINAL: g3233.t1 original gene structure, not modified by PASA NODE_4358_length_1747_cov_28.9031 AUGUSTUS gene 454 1641 . - . ID=g3233;Name=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS mRNA 454 1641 . - . ID=g3233.t1;Parent=g3233;Name=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS exon 1498 1641 . - . ID=g3233.t1.exon1;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS CDS 1498 1641 . - 0 ID=cds.g3233.t1;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS exon 1223 1336 . - . ID=g3233.t1.exon2;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS CDS 1223 1336 . - 0 ID=cds.g3233.t1;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS exon 965 1040 . - . ID=g3233.t1.exon3;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS CDS 965 1040 . - 0 ID=cds.g3233.t1;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS exon 454 625 . - . ID=g3233.t1.exon4;Parent=g3233.t1 NODE_4358_length_1747_cov_28.9031 AUGUSTUS CDS 454 625 . - 2 ID=cds.g3233.t1;Parent=g3233.t1 #PROT g3233.t1 g3233 MYCDMTESEKVRKEKEMRQGFHELFVETQLLNEFAALNYEGFSRILRKHDKILTGVAPIKEKYAGILAEKEFNDSDSVSRLAKEAENVYADAFEGGNRRKAASILAACIQSDYRLKPKEIPCDLLAKKGWIIDMDGVIYYQNHLLNGVIEFVEWLKRGDRRFLFLTNS # ORIGINAL: g9392.t1 original gene structure, not modified by PASA NODE_2023_length_8061_cov_38.0774 AUGUSTUS gene 2173 2667 . - . ID=g9392;Name=g9392.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS mRNA 2173 2667 . - . ID=g9392.t1;Parent=g9392;Name=g9392.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS exon 2537 2667 . - . ID=g9392.t1.exon1;Parent=g9392.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS CDS 2537 2667 . - 0 ID=cds.g9392.t1;Parent=g9392.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS exon 2173 2293 . - . ID=g9392.t1.exon2;Parent=g9392.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS CDS 2173 2293 . - 1 ID=cds.g9392.t1;Parent=g9392.t1 #PROT g9392.t1 g9392 MASKMSASACDYEPLKACLAANNNDQSKCKIEWEAFQRACAENRKSECTSCKETPAVQQIQTPVERAKTCVVTSTGERVCTYA* # ORIGINAL: g9391.t1 original gene structure, not modified by PASA NODE_2023_length_8061_cov_38.0774 AUGUSTUS gene 71 1422 . + . ID=g9391;Name=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS mRNA 71 1422 . + . ID=g9391.t1;Parent=g9391;Name=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS exon 71 166 . + . ID=g9391.t1.exon1;Parent=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS CDS 71 166 . + 0 ID=cds.g9391.t1;Parent=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS exon 498 626 . + . ID=g9391.t1.exon2;Parent=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS CDS 498 626 . + 0 ID=cds.g9391.t1;Parent=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS exon 892 1422 . + . ID=g9391.t1.exon3;Parent=g9391.t1 NODE_2023_length_8061_cov_38.0774 AUGUSTUS CDS 892 1422 . + 0 ID=cds.g9391.t1;Parent=g9391.t1 #PROT g9391.t1 g9391 TQVNEDDWYGFEHTADPTVIAYLLLQWFKELLHPIIKGGSSVAEAVLAGSFSHARKEMSKNTQHTIGCVAILIKQLMPLSPESSSSLYLNMARALTHDSSPQGAKLCHQTAALISALVDRWDPVVLPPILNPTKTSTSSSPDASGETLDMTLPVTAMMATEVGMWRGCSISTDPSNHKNPRKRSTMNNNGVTLEELAAASSAQQYAEAGDPSAPADIREISKHLAKVHTLPEGDYPGATLDETADEDVVQS* # PASA_UPDATE: g9393.t1, single gene model update, valid-1, status:[pasa:asmbl_3297,status:12],[pasa:asmbl_3298,status:12], valid-1 NODE_2023_length_8061_cov_38.0774 . gene 4138 7929 . + . ID=g9393;Name=g9393.t1 NODE_2023_length_8061_cov_38.0774 . mRNA 4138 7929 . + . ID=g9393.t1;Parent=g9393;Name=g9393.t1 NODE_2023_length_8061_cov_38.0774 . five_prime_UTR 4138 4545 . + . ID=g9393.t1.utr5p1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 4138 4649 . + . ID=g9393.t1.exon1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 4546 4649 . + 0 ID=cds.g9393.t1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 5153 5297 . + . ID=g9393.t1.exon2;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 5153 5297 . + 1 ID=cds.g9393.t1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 5619 5726 . + . ID=g9393.t1.exon3;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 5619 5726 . + 0 ID=cds.g9393.t1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 6057 6183 . + . ID=g9393.t1.exon4;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 6057 6183 . + 0 ID=cds.g9393.t1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 6501 6658 . + . ID=g9393.t1.exon5;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 6501 6658 . + 2 ID=cds.g9393.t1;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . exon 6844 7929 . + . ID=g9393.t1.exon6;Parent=g9393.t1 NODE_2023_length_8061_cov_38.0774 . CDS 6844 7929 . + 0 ID=cds.g9393.t1;Parent=g9393.t1;3_prime_partial=true #PROT g9393.t1 g9393 MAGFRARPSNLFSKLRDRETDWRAVRPNMRLTEARSFYTNVFPNHTLHDVQMPLGIMRKFSPDGHLLLSISRSQHSIKMYRFKGPAPAVDHITQANAFDAFFEPHFELSLTSSPEVIHKDFCLFTEGCKFMILASYAPSVNVPLEQPRNYDSLTCIANLEDVTFHLVDLTAGRVCDRRHFKSDYINLPHNTGVYLYQNTLGILSLQHQTIHIFQIKDSGHFVDLHRIGAFCYDDDELLLAHCREAYEGQQQQQQQQQQQASGMGSSAGGFQPPAGTTNGPAASTPGLIALQQQAAAAAAHQSAVIMQQAVASVHAAPAATGMGATGGAGTGAGAGALPHVTPPRHPHPHHHHHAAHPVSPMLQSGHVLGNPFTHTNHHVTGGAPVSASGGRVSPTMLSPQHSVLPPQTHSHHGVPVHNQHQQQQMQQALPLQMQPGASGSTLGLPRDGVGAGQRVFQGAAHNMPPIMPPVLTQMPPPAMLVHPTALPPALLPPAAPAAPPTLPPYFQSNGAPATAAQFHQQFVPASLALAAAGGMAPGGMGINPPGMGITPGIAPGITPAGMGVMAAALGTMAGTP # ORIGINAL: g956.t1 original gene structure, not modified by PASA NODE_3133_length_4236_cov_41.9988 AUGUSTUS gene 312 4125 . - . ID=g956;Name=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS mRNA 312 4125 . - . ID=g956.t1;Parent=g956;Name=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS exon 3647 4125 . - . ID=g956.t1.exon1;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS CDS 3647 4125 . - 2 ID=cds.g956.t1;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS exon 3035 3511 . - . ID=g956.t1.exon2;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS CDS 3035 3511 . - 0 ID=cds.g956.t1;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS exon 1847 2838 . - . ID=g956.t1.exon3;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS CDS 1847 2838 . - 0 ID=cds.g956.t1;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS exon 1192 1641 . - . ID=g956.t1.exon4;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS CDS 1192 1641 . - 1 ID=cds.g956.t1;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS exon 312 843 . - . ID=g956.t1.exon5;Parent=g956.t1 NODE_3133_length_4236_cov_41.9988 AUGUSTUS CDS 312 843 . - 1 ID=cds.g956.t1;Parent=g956.t1 #PROT g956.t1 g956 LKLTPGILRHILETCLLPAVALNDAYSLLDTTSITWDAASGVQRGTLDRASPLLAAYFAERRKPGFAWDASTHAVRRGIVPSAEHVRHTVAGLCKSGEPLAALVMLEHASKKGVLTVGDSGCYYQLFGACARMHDAATAKAVVAVMERGKLDPGPITFQNAFQAISSANDGDLVMRVYALLRSSSAFKRAMTMAHNRTQETSTKHPSNAANTTNTTNTATALHNNTEQQSIHGGNVRPSVDANDGNGNRSKRQTGAHHADLDLSIAHAFSLVSRLGRVGSALVMHRDARDMGVLPLRFGYAEFMDACLAMGDLESAEEVWPYVLHWMSGNADSRTLSSGGKFGVRDAPSRSRDETDLLTAAAAMVALRGFCETVYEGDGAGSLSPEAWQLTVSPPFDALTMAAQAGGLNPTDIFVHVCASLARLRLRARDAASAATKAATQSESDKNSNKYGGGLLSKMGIWTSSKQSQPSRELGSPAGTDAWGSVAVASDSVTTAATSVPESISAIDEHIAWVIASLVPHMKRRLVAERTADAIGSHFDGVSGGVVDEAAALTALLATPPHTTSPPTPTTQASTQNVGRGTSANAKTSATKGAHETTTATVTVGKGGADSAVAWVLRRVSEINDLEASDCRALATSLDTGGLSPQKNRTASFLISLYARTGDVIGAQSCLESVLLTRGLVPDTMTIAAVANAYAVAGDFGGAMKLFSASTERYNLTPDAHVLSALLKACRKDDTLTPRKRVSAAQHIWAVFTEQYGVAPDRICNLMMLDVLTDLGQPEDAARWMEKMTDSGVTVGITGLESSGAKGHGERMRRDFLYQAAMVASCAQSLRNILYSDPALSTSPWTAPPVEGLQVDDTGTPLTPPAAYDGTGGAWSHTANNVATMEDAPTSDGNTPLPLVSIVESSPDTAVTAPEVNISVNAVHGAAHESVVGNGVTWTEGRMLEAICRASFEAAVALAKTEINAAEKRRWGGVEA # ORIGINAL: g1402.t1 original gene structure, not modified by PASA NODE_5479_length_835_cov_32.0921 AUGUSTUS gene 168 652 . - . ID=g1402;Name=g1402.t1 NODE_5479_length_835_cov_32.0921 AUGUSTUS mRNA 168 652 . - . ID=g1402.t1;Parent=g1402;Name=g1402.t1 NODE_5479_length_835_cov_32.0921 AUGUSTUS exon 388 652 . - . ID=g1402.t1.exon1;Parent=g1402.t1 NODE_5479_length_835_cov_32.0921 AUGUSTUS CDS 388 652 . - 0 ID=cds.g1402.t1;Parent=g1402.t1 NODE_5479_length_835_cov_32.0921 AUGUSTUS exon 168 216 . - . ID=g1402.t1.exon2;Parent=g1402.t1 NODE_5479_length_835_cov_32.0921 AUGUSTUS CDS 168 216 . - 2 ID=cds.g1402.t1;Parent=g1402.t1 #PROT g1402.t1 g1402 MPIALFCFDRSFYASVEAVEVVMPDGTSTLYPELPYRTEKVTIEYVNTRVGIKREAADVADLLSRMCMPSFVEADGRTITVEVPPTRTDIIHICDVMEDVAIAH # ORIGINAL: g3567.t1 original gene structure, not modified by PASA NODE_257_length_29000_cov_42.8805 AUGUSTUS gene 11413 18218 . + . ID=g3567;Name=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS mRNA 11413 18218 . + . ID=g3567.t1;Parent=g3567;Name=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 11413 13959 . + . ID=g3567.t1.exon1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 11413 13959 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 14537 14628 . + . ID=g3567.t1.exon2;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 14537 14628 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 14776 15796 . + . ID=g3567.t1.exon3;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 14776 15796 . + 1 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 16033 16213 . + . ID=g3567.t1.exon4;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 16033 16213 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 16392 16588 . + . ID=g3567.t1.exon5;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 16392 16588 . + 2 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 16840 16941 . + . ID=g3567.t1.exon6;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 16840 16941 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 17055 17345 . + . ID=g3567.t1.exon7;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 17055 17345 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 17586 18218 . + . ID=g3567.t1.exon8;Parent=g3567.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 17586 18218 . + 0 ID=cds.g3567.t1;Parent=g3567.t1 #PROT g3567.t1 g3567 MKQPKLAISGRRKSSVDASSARMGLANNPANNASTSRPDVRFPGIVYDRRTMSASDVSVNKQKPIVAPQDAPIGRSGPVKPMNLFSQIQSIEETTTASPLPARSESIKEQHKRVPSRLDPISVSHALSQSLPAQPHPLNASLPMGKSDEPVRVPGGASPRMGAREMRRQEKAARVQAIALLPGGKSPLEGLTGLLRLKAEVRYMSKRTFRVFISSPGGLEEERKILHEQLFPEIRNACEEAGLFFVPIDVRWNGGDAQDKDHSLALALEEMTDCDIFVGFLAQKYGACAETSPEAEAAISRAITADPDGGTWLEPHKGKSVTEIEFIRGHMLEPGKRHAIFALRSDTYDEALRNATQGSIESTKYSAESEDAAVSVEELKIRIRLSAREGRCALYDDYDDPAQGAKLVADKLMAIAMDLISARQEVGFGLGDAEACAHEAFLLSRAGENQVYVGGEKYFAAIDGHIEHSVTPGTPPVLLITGEAGCGKSSLIANWVYRANLRRAAELGGISTANNNVSGAPNDPLSTSASAAAVTVHDGSDETGHGRTSEVAHAGPGAGAVTQPGSLGASFSHTGGDSASGHSSAPVSAAPRPVYHFVGSSTNSTDPSNTLRRLIIGIEIALGVPPTDPGRLENLIKLTRTPHERRPAHGDAHTTIHEDKVAAATTTEGAGATASSLSTVGSSHATSHDADGKDEAPFEALVERLCDLCRTVDENAPKIVLVIDAADQFENRNHAADLDWLSRAADTAGPNMRFLVSAVSESRAMLAARKRGWKTMLLLHLTVEERSKVIMEVLKQRSRSLTESQIAAIVNSQQTASPLYLKAVLEEVCVYDQEKIDKKIDQVLMSRNTMSRYGLSESEVLDLLGDRQRYWLPLYHSIRRYLVVRAGLVGFFHRQLADAVVEKYLSEPSRVKAHRTRLAQTFAQYEPTSERRIQEYPWQLMHIGDKDALFDYIITPAVFEKMCRGPYKFDLLRYWQYLGKSGREICDAYRRVFADWQRARSRKPSVSNSSATLNGTATLDASNMAAMAAAASGAVDEPHPLGQEEYAAGSTTFLSETAAARVTKAMLDLGSFLYFAGYSSEAVKPFERALKLTEQVHGRDHQRVAVILNNLAIIREMEGNHVEAAKMYERSMSIRIESEGECTIEMAQMYHSLAAVYEAALQYPRAAELYERALVIKQKLLSDSNCEVAITLSALGQTKSFLGMRAEALKMFVRASRIYEAKYGENCVEVADCHSHMAAIYEDLMDLPHALEHYKKCLDIRQAQRDSMQPETAVALNNLAGVYIKVGDKRKALDLLNRALLVKQTVMGKHHPSVASTLENLAVVYESMMEDNDKALELRAVALQIKIIALGEKHIDVGSSRHCLSMLYSKIGELDKAADQARLALVIYTDTYTNSSPMLVPVMENYSTILQSKGDVEGALSLLKGAIAIRETDPATGPVDIVQAGIRLATVLQGNERHKEALPLFMKACRALKAANGPNDFQAAVVMERIAKSQEAMGNPESALDSYWEALEMREASRMAALEAASDNSFNGVKAHQEQLHPSGDSADFVSVETQVASIVNTLGNLVRLLAAKGQFEAALPLLIRRIQAMDKIGQNTSTAYATDLHNAGAMSLKLGHTDARSRQLLEKALDLRVKLLGADHEQTCSTRQWLAGWPPESSQDRAMLRSSSEEEMTLSSTPQMPRTRMR* # PASA_UPDATE: g3570.t1, single gene model update, valid-1, status:[pasa:asmbl_4583,status:3], valid-1 NODE_257_length_29000_cov_42.8805 . gene 25943 28492 . + . ID=g3570;Name=g3570.t1 NODE_257_length_29000_cov_42.8805 . mRNA 25943 28492 . + . ID=g3570.t1;Parent=g3570;Name=g3570.t1 NODE_257_length_29000_cov_42.8805 . five_prime_UTR 25943 26064 . + . ID=g3570.t1.utr5p1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . exon 25943 26380 . + . ID=g3570.t1.exon1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . CDS 26065 26380 . + 0 ID=cds.g3570.t1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . exon 26535 26653 . + . ID=g3570.t1.exon2;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . CDS 26535 26653 . + 2 ID=cds.g3570.t1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . exon 26820 27061 . + . ID=g3570.t1.exon3;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . CDS 26820 27061 . + 0 ID=cds.g3570.t1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . exon 27242 27888 . + . ID=g3570.t1.exon4;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . CDS 27242 27888 . + 1 ID=cds.g3570.t1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . exon 28052 28492 . + . ID=g3570.t1.exon5;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . CDS 28052 28350 . + 2 ID=cds.g3570.t1;Parent=g3570.t1 NODE_257_length_29000_cov_42.8805 . three_prime_UTR 28351 28492 . + . ID=g3570.t1.utr3p1;Parent=g3570.t1 #PROT g3570.t1 g3570 MSVTAAVFDVEGSQTQVQHVSAGNVAGEMATHKVSPAPDTTAANRTAPAPPSAEDLQLGCYLRFRNTVRRGLAHPYLSVPLLGPLGAYVIDINLIELIVVAAYVILIVLLLPYTLGILVTLCIVMLIIPRVNILTYLTGISFERMVKYHRWMAYFLICPMLLHAFDEKVTTEWNKDSTNLIGMIALCVYGGLFLTTLEFIRRKWFEVFYFSHILAFAFIGVATAHEAINIAVCAPGLIQYVVDRIFRRMKSKQVHSASAYAAPGNALVLTVPNKIDGPFPKGFEAGQFAFLRIPSISTVQWHPISIASAPCDTDVRFVIRNHLGHGWAARLCDAAGGATTSSSTGKATDFEMKSAESGAVSGLGRSVAMDVNIDGPYGSLSLWVYDYDAIVVFGGGSGVTPMYSVLRDLHERARRGESIGKITKVIFCWTFREADCAFWFGDELGAMDGTVGKTTFDVRAFTTTKNEAEVASVSSKANLRLQRGRCDHKEIFNALIAEGHSRVAVLACGPLGMVDRVKLGTISATTSKTVFNFHQETFSF* # PASA_UPDATE: g3568.t1, single gene model update, valid-1, status:[pasa:asmbl_4585,status:3], valid-1 NODE_257_length_29000_cov_42.8805 . gene 18653 22469 . - . ID=g3568;Name=g3568.t1 NODE_257_length_29000_cov_42.8805 . mRNA 18653 22469 . - . ID=g3568.t1;Parent=g3568;Name=g3568.t1 NODE_257_length_29000_cov_42.8805 . five_prime_UTR 22346 22469 . - . ID=g3568.t1.utr5p1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 22135 22469 . - . ID=g3568.t1.exon1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 22135 22345 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 21733 21881 . - . ID=g3568.t1.exon2;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 21733 21881 . - 2 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 21032 21286 . - . ID=g3568.t1.exon3;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 21032 21286 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 20672 20803 . - . ID=g3568.t1.exon4;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 20672 20803 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 20238 20382 . - . ID=g3568.t1.exon5;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 20238 20382 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 19973 20058 . - . ID=g3568.t1.exon6;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 19973 20058 . - 2 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 19652 19727 . - . ID=g3568.t1.exon7;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 19652 19727 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 19244 19428 . - . ID=g3568.t1.exon8;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 19244 19428 . - 2 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . exon 18653 19015 . - . ID=g3568.t1.exon9;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . CDS 18677 19015 . - 0 ID=cds.g3568.t1;Parent=g3568.t1 NODE_257_length_29000_cov_42.8805 . three_prime_UTR 18653 18676 . - . ID=g3568.t1.utr3p1;Parent=g3568.t1 #PROT g3568.t1 g3568 MAATLSDVFVENISWAGRWLWSWVRGNDSVVTGGALSEPIGAARSVNPTTPDASWPARRGPATSAAAKKTGGGNTMAQSSSHPVLADLALKRDAVRSLLDEAMTNDEAKDVTKALQLYEKVVVQSESVGASLHHARDSLPGPANEAALSKFKKQLSSYRSIAIERKGALSGRADAAVSMAAAANTASLSRGKSAKTKGAVAVISKGSTGASVKSPQVSRPGSVHSKALQRMDPQIVATIESEIVDSVAKVSFGDITGLEGPKQALNEMVILPARRPELFTGLRTPEKGLLLFGPPGNGKTMLAKAVACEADSVFFNISAASLTSKFVGESEKLVRTLFAIAREKPRAIIFIDEIDSILGARHSNEHEATRRLKTEFLVAFDGVGSSASDNIVVMAATNRPWDLDEAALRRFPKRIYVPLPERASRAEMVKKLLSKQKNAVSASDVDWIAGQTDGYSFSDLTSLAKDAAFGPLRECGSNIVDVAADKIRPLRVDDFKKSLAKIRPSVNPASLREFTTWRDDRGSLD* # PASA_UPDATE: g3566.t1, single gene model update, valid-1, status:[pasa:asmbl_4584,status:12],[pasa:asmbl_4586,status:12], valid-1 NODE_257_length_29000_cov_42.8805 . gene 2281 8525 . - . ID=g3566;Name=g3566.t1 NODE_257_length_29000_cov_42.8805 . mRNA 2281 8525 . - . ID=g3566.t1;Parent=g3566;Name=g3566.t1 NODE_257_length_29000_cov_42.8805 . five_prime_UTR 8389 8525 . - . ID=g3566.t1.utr5p1;Parent=g3566.t1 NODE_257_length_29000_cov_42.8805 . five_prime_UTR 7947 8015 . - . ID=g3566.t1.utr5p2;Parent=g3566.t1 NODE_257_length_29000_cov_42.8805 . exon 8389 8525 . - . ID=g3566.t1.exon1;Parent=g3566.t1 NODE_257_length_29000_cov_42.8805 . exon 2281 8015 . - . ID=g3566.t1.exon2;Parent=g3566.t1 NODE_257_length_29000_cov_42.8805 . CDS 2637 7946 . - 0 ID=cds.g3566.t1;Parent=g3566.t1 NODE_257_length_29000_cov_42.8805 . three_prime_UTR 2281 2636 . - . ID=g3566.t1.utr3p1;Parent=g3566.t1 #PROT g3566.t1 g3566 MASPRGTQAIQFALVWAILCAMTVSALPPTAPRGIPDQDINYGYAFSYAIPGDVFIDPDTDDSDLTYVVTTTTGRPLPSWLAFNDNDRTFVGIPLKADRGTTGVMVTVFDPDGGSARAMFAINVFKDTELDTAPCYRFDVVTGVDLEFNDRTAANRYRVAKNLAQVATVDSQSFYIINVTSTDDSGDIMGWRLRCGAKTSSYSNVRLISRLTKMFEDNTLGGSIGYNVLGLGVSSLYFVSDTQNNQPATQTQTESVGPSTQAASSEAEGTATQTQSPSASFTKTRLPSVVGSDVGTQSVTPTAPITEVSQSVETTISASPSVSKGTVKATGTAAASTSGKGIESTKIVVSTFRPHSSSSSPSFSSSSSVTIVTESASETGTAVPTNTFSAVTGTPTSTFAVPKASSTTKVATKSSSAAASPSQSVASITTSLAASASVSSVFVNPASVTTATVAQPSVTTEASSIPVSTAVVESSSAAAESSPVSVSTAEVEASSAAESSAAESSAAASSEVSTFSQLASSSTIEQATPTPTTTARPSSATKTVTPTARPTTPSGPECRPADNSTDFNLRSQSDVDALGARKCGIIVGNLFIKSSTIRTLQKLTTIEEIRGNLTVTNTPRLTSLVGFENLYQVFGGVSINSNDGLMSLSALNWLAFVHGDFRITSNANLTSVAGLGLLTSVSGDLVLARNPSLRGAFGAPTASFASLLEIFGSLTLDENAMLQTTFDFAALRRIGSSLNIYKMDNLTDVDGFSGVTAIGKNLDVENNAVLANLDGLANVKVIGNDLYLVNNPKLCAILGQSIASFPWEEVVLGTIYISNTCGATISVGPRNSSPSPSPSRSTAVASATVESVSVAASSSVAAIASDTVGASSSAASATVATETVEASATSSVEASETVASETVASATVEASTASETVASATVEASQSQTVESATVASPTVASETVEASTASETAASETLASETVATQSVATETAATSSVEAFSETTATTAPEASSSASESVASESFSSASASPTFVRPPPAVPNATIDDMTFSIGNGYFTLPFPRNLFSYHNVDLLTIRACACGPETEPLDDSIVQPDDIDEARPLPDWMYYALGESRIYGVATNADHERAENYTLRLYSVDEYNRLVWGNWFTITLVRDPEVPYITFEMTLARVFETYAALHKVKFGQVLPAVLTLDPHKFNLRGFSRGSTVVDFAVNAANTLQENLDIFNTISNNLTSVQNGLNDQVLDFNFKITNPDKAVSATPSATPATQSTTVVATVVPTETAASGTVESTASATAALETSATATVAGTESVATASPTVEASQTTLAGVVQSASATAVSATVEASVTTATAEQASVTTATVAASATVESATVAASVTTDTVAAASVTTATVAAASVTTATVAASVTTATVAAASVTTDTVAAASVTTATVAAASVITDTVAAASVTTATVAAASVTTAATVAASVTTATVAAASVTTDTVVAASVTTDTVSAASVTAATVAASVTTDTVAPASVTTDTVAAASVTTDTVAAASVTTDTVAAASVTTDTVAAASVTTDTVAAASVTTPTVASSAAASATVASATAASATVASVTTATRAPTTTAGAAATSAAPPTAANSSSSNKAAIIVPAVVIPIVVLAAIILALIYYQRRKKSGAYILEKAGKSSNRKFYKPKPPNIVPMDLEGVVPQFANDQRLDDDLSGEEDAPAMTMSAGSLAAAGVGAEKKVAPVPDAPAAISREAPPYRPPPPFEQVASRQGAAPAAAPSARLPAPPYRPPPAYRPST* # ORIGINAL: g3569.t1 original gene structure, not modified by PASA NODE_257_length_29000_cov_42.8805 AUGUSTUS gene 23197 24822 . + . ID=g3569;Name=g3569.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS mRNA 23197 24822 . + . ID=g3569.t1;Parent=g3569;Name=g3569.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS exon 23197 24822 . + . ID=g3569.t1.exon1;Parent=g3569.t1 NODE_257_length_29000_cov_42.8805 AUGUSTUS CDS 23197 24822 . + 0 ID=cds.g3569.t1;Parent=g3569.t1 #PROT g3569.t1 g3569 MSTSEYQAYLRENKSNQTAGSFTGLVDYLYLDDRTGEMRIAGTKQCHVAITPEQLPAIIVPTPTNGHPNGVEIRPVELHPNPLRGPGNYIAICVQVDAVDEDVSDEADASCEAGSPLTPLSTAWIDDQFLPSTILPGGIDSIGTFTEICQPFRKSTLHMDPGQSSDNALNQSGAATAHTDFAIERQQSPQLTTTSVNEGPQTPRAPLTPIEEINVATEKAKEKLLLRQEAASPKRKTEALKRKLSCVGTFTSASESGAMAAPTIDDVFSRSMLLAAAREFITFDVTLEEGLVATSVRDEDNGLECRSVGKDEFKDHVKRYCNSSDSRVGSIRRTHKHLEVATTDENGQKSVRHLLSASLGRNPTITHIILTFPEVSPETQLVDRVTVEVRDYGPSKKRGQRCVSESSSKLPITPIRTPTAATPARTPRTSSGAQRNLKRVLSLPADPAVFPPCGLQRRHTFSGPSTYDFTQFPATTPLSLQTTCAHPQGGVRGAANGPVLHPTISQASPVAGSVSVTGSPTGGLSAEDEFFAVYNQGFYPF* # ORIGINAL: g3026.t1 original gene structure, not modified by PASA NODE_6456_length_566_cov_120.289_potentialcontaminant AUGUSTUS gene 1 566 . - . ID=g3026;Name=g3026.t1 NODE_6456_length_566_cov_120.289_potentialcontaminant AUGUSTUS mRNA 1 566 . - . ID=g3026.t1;Parent=g3026;Name=g3026.t1 NODE_6456_length_566_cov_120.289_potentialcontaminant AUGUSTUS exon 1 566 . - . ID=g3026.t1.exon1;Parent=g3026.t1 NODE_6456_length_566_cov_120.289_potentialcontaminant AUGUSTUS CDS 1 566 . - 0 ID=cds.g3026.t1;Parent=g3026.t1 #PROT g3026.t1 g3026 AWATVALVITKITNNPDNNAAPLLFFVGLPLTALAGGLAIAERRRILLNKHVTRIASPYEIELKVRFMLEPLVSKRRLTLLHAEDTDTDAAAEQERLTLVAQADEVYRRAIKIIGTASILLVFQSQFYCSIARNTVLGARALAKASRLPPFSLDEEFFLFRRQQTSQEYFASGASESKDVVAYMTFIQ # PASA_UPDATE: g5430.t1, single gene model update, valid-1, status:[pasa:asmbl_3965,status:16],[pasa:asmbl_3967,status:12], valid-1 NODE_2298_length_6814_cov_36.6919 . gene 3993 6401 . - . ID=g5430;Name=g5430.t1 NODE_2298_length_6814_cov_36.6919 . mRNA 3993 6401 . - . ID=g5430.t1;Parent=g5430;Name=g5430.t1 NODE_2298_length_6814_cov_36.6919 . five_prime_UTR 6401 6401 . - . ID=g5430.t1.utr5p1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . exon 6305 6401 . - . ID=g5430.t1.exon1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . CDS 6305 6400 . - 0 ID=cds.g5430.t1;Parent=g5430.t1;5_prime_partial=true NODE_2298_length_6814_cov_36.6919 . exon 5870 5974 . - . ID=g5430.t1.exon2;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . CDS 5870 5974 . - 0 ID=cds.g5430.t1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . exon 5075 5535 . - . ID=g5430.t1.exon3;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . CDS 5075 5535 . - 0 ID=cds.g5430.t1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . exon 4691 4868 . - . ID=g5430.t1.exon4;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . CDS 4691 4868 . - 1 ID=cds.g5430.t1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . exon 3993 4409 . - . ID=g5430.t1.exon5;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . CDS 4293 4409 . - 0 ID=cds.g5430.t1;Parent=g5430.t1 NODE_2298_length_6814_cov_36.6919 . three_prime_UTR 3993 4292 . - . ID=g5430.t1.utr3p1;Parent=g5430.t1 #PROT g5430.t1 g5430 WFDANIEHSLPHDIEPLIRTLPIVPSVAEPLQLELARVGAKEVGVGAVIALQSGPNRIVPNGTFDANINTIDSLVGTTIFNALIARGFLLNDLSLSPIGAALSKFSPPNAEEGLVALELLRFGHLSGDPFSPVGNQRKPLPAVHATDRLVNLLARVGALLPITHGDNAWAGAVDKDLLVFNSGMRAVHRSLRNLAEALCVSLFVQRRALIAETDYSKVAFRLPLFMEPSTAFGIVFKTFLLGTGLAGVQGDGVVAQLQTLFPAAVAIDKDLARAFGFWGQFKDAVSVLRAANAVSADYAKDVADADALLASRRQATGL* # ORIGINAL: g5429.t1 original gene structure, not modified by PASA NODE_2298_length_6814_cov_36.6919 AUGUSTUS gene 435 2401 . - . ID=g5429;Name=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS mRNA 435 2401 . - . ID=g5429.t1;Parent=g5429;Name=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS exon 2286 2401 . - . ID=g5429.t1.exon1;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS CDS 2286 2401 . - 0 ID=cds.g5429.t1;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS exon 1622 1959 . - . ID=g5429.t1.exon2;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS CDS 1622 1959 . - 1 ID=cds.g5429.t1;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS exon 866 1253 . - . ID=g5429.t1.exon3;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS CDS 866 1253 . - 2 ID=cds.g5429.t1;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS exon 435 570 . - . ID=g5429.t1.exon4;Parent=g5429.t1 NODE_2298_length_6814_cov_36.6919 AUGUSTUS CDS 435 570 . - 1 ID=cds.g5429.t1;Parent=g5429.t1 #PROT g5429.t1 g5429 MGVTYSAANFVSTGGLLLSKLVLTREGVAEQECYAKYIRVDDPSDVSRKYISFIIRPNAVFRCVLEYTCKTDLWGVRVFAVTDLENLSTFPELLAVGSKFEPKATWMVKSDASEYLGDLKRSNDPQVYHSKPITIPDELLQLETPIFRTANYYVDSNNIILLAHYNELVLEGAHSLQVSQKETARRMAELGSTADLAADSEDTDSIDDFVSVDTDAGYLDFRPLLREALASKSGVVRYMEAMDGESIAYRQFVPQGPVKSAVLFLLSFSQDSYSVQCVGESLLAHGVATFIMDYRGHGLSGGPRGDVVSEPILWGDVRSMVRRIR* # PASA_UPDATE: g2749.t1, single gene model update, valid-1, status:[pasa:asmbl_7176,status:12], valid-1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . gene 158 1667 . + . ID=g2749;Name=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . mRNA 158 1667 . + . ID=g2749.t1;Parent=g2749;Name=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . five_prime_UTR 158 159 . + . ID=g2749.t1.utr5p1;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . exon 158 281 . + . ID=g2749.t1.exon1;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . CDS 160 281 . + 0 ID=cds.g2749.t1;Parent=g2749.t1;5_prime_partial=true NODE_4280_length_1887_cov_28.6683_potentialcontaminant . exon 493 741 . + . ID=g2749.t1.exon2;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . CDS 493 741 . + 1 ID=cds.g2749.t1;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . exon 883 931 . + . ID=g2749.t1.exon3;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . CDS 883 931 . + 1 ID=cds.g2749.t1;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . exon 1230 1369 . + . ID=g2749.t1.exon4;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . CDS 1230 1369 . + 0 ID=cds.g2749.t1;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . exon 1640 1667 . + . ID=g2749.t1.exon5;Parent=g2749.t1 NODE_4280_length_1887_cov_28.6683_potentialcontaminant . CDS 1640 1667 . + 1 ID=cds.g2749.t1;Parent=g2749.t1 #PROT g2749.t1 g2749 FGTVFLGAWRGTKVAIKTIRFGGSETPTSNVSTQTNPDKNSRAMAAVSRARTTQRASKSSGTESMKARTGTGASIGSGGTRLNALRSLIGTNGTAIIDKLRANPEKMRRLAAASEFMDEIKIMCDLRHPNVLLFMGASIQYPNIALVTEVCERGDLMTILRSTMEIDYGMKLRFIMDCAAGMMYLHSATPAVLHW* # PASA_UPDATE: g4459.t1, single gene model update, valid-1, status:[pasa:asmbl_5832,status:12], valid-1 NODE_3284_length_3834_cov_40.8244 . gene 271 837 . + . ID=g4459;Name=g4459.t1 NODE_3284_length_3834_cov_40.8244 . mRNA 271 837 . + . ID=g4459.t1;Parent=g4459;Name=g4459.t1 NODE_3284_length_3834_cov_40.8244 . five_prime_UTR 271 316 . + . ID=g4459.t1.utr5p1;Parent=g4459.t1 NODE_3284_length_3834_cov_40.8244 . exon 271 837 . + . ID=g4459.t1.exon1;Parent=g4459.t1 NODE_3284_length_3834_cov_40.8244 . CDS 317 577 . + 0 ID=cds.g4459.t1;Parent=g4459.t1 NODE_3284_length_3834_cov_40.8244 . three_prime_UTR 578 837 . + . ID=g4459.t1.utr3p1;Parent=g4459.t1 #PROT g4459.t1 g4459 MPVVAEDVEAKVDGVAHAVVAVAAPLLVAVPPRRTARRMDADAHPRPCADVGRHPQYADAPARGHALPRVGVAVAAAEALVGVGAA* # PASA_UPDATE: g4460.t1, single gene model update, valid-1, status:[pasa:asmbl_5833,status:12],[pasa:asmbl_5834,status:12], valid-1 NODE_3284_length_3834_cov_40.8244 . gene 1140 2993 . - . ID=g4460;Name=g4460.t1 NODE_3284_length_3834_cov_40.8244 . mRNA 1140 2993 . - . ID=g4460.t1;Parent=g4460;Name=g4460.t1 NODE_3284_length_3834_cov_40.8244 . five_prime_UTR 2923 2993 . - . ID=g4460.t1.utr5p1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . exon 2641 2993 . - . ID=g4460.t1.exon1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . CDS 2641 2922 . - 0 ID=cds.g4460.t1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . exon 2283 2412 . - . ID=g4460.t1.exon2;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . CDS 2283 2412 . - 0 ID=cds.g4460.t1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . exon 1935 2015 . - . ID=g4460.t1.exon3;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . CDS 1935 2015 . - 2 ID=cds.g4460.t1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . exon 1613 1804 . - . ID=g4460.t1.exon4;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . CDS 1613 1804 . - 2 ID=cds.g4460.t1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . exon 1140 1395 . - . ID=g4460.t1.exon5;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . CDS 1280 1395 . - 2 ID=cds.g4460.t1;Parent=g4460.t1 NODE_3284_length_3834_cov_40.8244 . three_prime_UTR 1140 1279 . - . ID=g4460.t1.utr3p1;Parent=g4460.t1 #PROT g4460.t1 g4460 MSDEPTIDVFISYSWANSDLARTVKERLCQCGLRCWLDVEQMQAGSWLYDKIVEGLNSSRVFLPFITAEYLASANCGKEIAVAADWKMNILPVKAGDFKRWPPVHAAAAHLAGRLYIPIPSTNQIDSQMGPLIEALQGLGVRVATQQVVAAPAPVRPKNLVAVVDLPSGMWRGFYASPPNGQRDQMNLQLNFASGKVWGEGSDPVGEFFISGNYDVKTSGVKMVKQYVGKHAVNYNGTFKARTLSGMWTINGCPPDWTGQWQLNAQ* # ORIGINAL: g1634.t1 original gene structure, not modified by PASA NODE_2227_length_7163_cov_37.5483 AUGUSTUS gene 3655 6987 . - . ID=g1634;Name=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS mRNA 3655 6987 . - . ID=g1634.t1;Parent=g1634;Name=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 6894 6987 . - . ID=g1634.t1.exon1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 6894 6987 . - 0 ID=cds.g1634.t1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 5390 6661 . - . ID=g1634.t1.exon2;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 5390 6661 . - 2 ID=cds.g1634.t1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 4719 5090 . - . ID=g1634.t1.exon3;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 4719 5090 . - 2 ID=cds.g1634.t1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 4296 4468 . - . ID=g1634.t1.exon4;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 4296 4468 . - 2 ID=cds.g1634.t1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 4010 4188 . - . ID=g1634.t1.exon5;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 4010 4188 . - 0 ID=cds.g1634.t1;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 3655 3763 . - . ID=g1634.t1.exon6;Parent=g1634.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 3655 3763 . - 1 ID=cds.g1634.t1;Parent=g1634.t1 #PROT g1634.t1 g1634 MQDPSQFDIIAEGERLADELTVAAGLSVPSLSAARVDSGSPTQRAKRRRQDSLGTEASAYQQAFSAHDPSFSAAVNTPVSMDGMTLGSFPKQSDVAGGQRGLAGSTPEMFSIAHAVSSLGYGSMSTGAPLSQSQFQSQVSQPLSSPASSQIGPLRVEIGDLRDPVMEVRHPFGRSLVFLDANNALRVEHRLSLGMTAVNDAGAAGSHLGGTGVGGSQYDGMDFSGIDAATLAAAGLTATTADGSVIRGPNADFAEFVRCAEGHAPRLGAGSVGNFRKGVLSCDGFEEGSEVTARIVSTKPLVLGNVQSDSEAHSVRVAMVGQVPVRMRGCVRQGDYAYAGNEFGVVLAAGETDMTVEKFGRVVGICLEGRPDALADDVNDVHVLVYYPDVGWLTRHMGKATASAAAAASTSASASASTASAEEVKRVREELDNLQREFRKHLDAVGGVAPVGPDGGPYFVPKRGDAVIIMSSADGKPQIVDNGPRSQHIAIIAGAACLIIIAIALGVGLGVGLHSSSGGGGGGGGGGGGVCPNPSGCGTDGCPTFLRGMGEGLAVSPSAYGLSFSSGAMTSWVALPNNTGQIYDMCNTPDIPPTTSRLAFTATGVCASGRTVTNANQIPIEIFFMMTGSSGQMPTVQARLSLDAAGDGNFEEVVLFRYFPLADLTTGQLANYTGTACSQPSSLVQSMTGGTILLEFWISTGTRPVSVAVNAPNNLSPRSFFQTTFSSISTAN* # ORIGINAL: g1633.t1 original gene structure, not modified by PASA NODE_2227_length_7163_cov_37.5483 AUGUSTUS gene 277 3010 . - . ID=g1633;Name=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS mRNA 277 3010 . - . ID=g1633.t1;Parent=g1633;Name=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 2888 3010 . - . ID=g1633.t1.exon1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 2888 3010 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 2545 2706 . - . ID=g1633.t1.exon2;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 2545 2706 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 2361 2433 . - . ID=g1633.t1.exon3;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 2361 2433 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 1885 2070 . - . ID=g1633.t1.exon4;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 1885 2070 . - 2 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 1546 1664 . - . ID=g1633.t1.exon5;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 1546 1664 . - 2 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 1021 1257 . - . ID=g1633.t1.exon6;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 1021 1257 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 662 802 . - . ID=g1633.t1.exon7;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 662 802 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS exon 277 450 . - . ID=g1633.t1.exon8;Parent=g1633.t1 NODE_2227_length_7163_cov_37.5483 AUGUSTUS CDS 277 450 . - 0 ID=cds.g1633.t1;Parent=g1633.t1 #PROT g1633.t1 g1633 MESNKRRASDYSNLPPAKRLMLESASGGAEEEEEDDSPEGQMKSRILLAQRKQLTNRLKEQRTEISALETRIASLEKKEISDASAIATVQRYWDKFNEDVAALLKSNLSPEAVSDVSLNDYAKASVSFAERLVKGSRPEEVEPLLAERCAESMQAVSRLVAAFAGNRARLDTLAAESAQRAESGDVTSALKIQTDELREEVRKLQNGFSELQDQHNAASMQLAEARDTAVISQQRAETLALQAADIRDDLTLATNTVAKLRLRLTEEQRKAAQAIRDAEAASAQAVAAGASKDGAATGVVAQSEDVEDLRAQLSALREISDDRLREIESLRDEKQQNQQEIDRLKSEARAPPSSRIEGSALVKRMKDDIAYMGRELVEVRARFDAARQEVVLLRQSRKQDCELYE # ORIGINAL: g2082.t1 original gene structure, not modified by PASA NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS gene 3099 6708 . - . ID=g2082;Name=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS mRNA 3099 6708 . - . ID=g2082.t1;Parent=g2082;Name=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS exon 6706 6708 . - . ID=g2082.t1.exon1;Parent=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS CDS 6706 6708 . - 0 ID=cds.g2082.t1;Parent=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS exon 4244 6142 . - . ID=g2082.t1.exon2;Parent=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS CDS 4244 6142 . - 0 ID=cds.g2082.t1;Parent=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS exon 3099 4115 . - . ID=g2082.t1.exon3;Parent=g2082.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS CDS 3099 4115 . - 0 ID=cds.g2082.t1;Parent=g2082.t1 #PROT g2082.t1 g2082 MQGRLQNARYEEKRQEEQRREEQRQGKLRQDEQRRDEVRRDELRRQEELQLDAEKAAALYRPPLFDVEQHLFGARTRRVGAFATAESGQDAPGATIFAVGRLVGVLRGLCEANSVTSISQESRNALNLARNAEQAYFASMNAIRAENERADTVRTLVHHRDRTRFAFVRAVDKLAETMDNNAGLVAKIERCVTTAAQLRECTVAIAPNNQPLPANRPPAEVTGAIVHALRHYDVWLQRLNATCQRSQDHTDTVAAALSAHVRWLADVLDGNADSQLLSSVPVGVGRALSDAQDECRELCATLTSAIQNESAERAAVGDPPADALVAAARGMIGHALAAYSEITQAMAECMRLVRVADELRPFADGTVAPPTDAAALRLQEMLEDRRHALELASLELRHLAKKSNADKLAEVNLRKQLAEREYREMAAALDLECLRLLRLAGTHFPELRVLCKAVNVAVGAELGGVFSEAASLSLYDIEGPLSEGGVNSRHTVLLAKRAATSEAAGNESRVVLKQFSFDATNDSTSFLREARRLVRLVYPHVVAITRVFVDVLRTGIDMDDGKQCGFIEMPYYINGDIASWIEKESPSPALKRRALQGVLRGLEHVHHKGTVHGDVKPQNMLIDADGRGVLGDFDSIATMQSDMYSFALSVFDVLFPPVGNSQSARRPTPQAVAFEGKVVHVPEDCDNKDLKAFLEAALATRPEERPTSRNALAHAYFATVSVGNVSAMGIVRHCVICFDSYALDEGIECGNSADGGHFVCASCLDGYVASCSEAAAMSALSRNRGGVTCPERGCNAGTFGIARIAELVSVDVYAKFMDAQWRIKEKQVVSDMEARYAALEQERCRAANAQSVVEGHRRRILEDILTLKCPRCTAAFVDFDGCFALTCGRCGARFCAWCLADCGADAHRHVGKCPKARSARPLYGRFSEFVAAQAERRGRELHAYLDNIGNVGVRNAVADAIRKDAADVGVVV* # ORIGINAL: g2083.t1 original gene structure, not modified by PASA NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS gene 16410 17309 . - . ID=g2083;Name=g2083.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS mRNA 16410 17309 . - . ID=g2083.t1;Parent=g2083;Name=g2083.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS exon 16410 17309 . - . ID=g2083.t1.exon1;Parent=g2083.t1 NODE_805_length_17499_cov_42.3871_potentialcontaminant AUGUSTUS CDS 16410 17309 . - 0 ID=cds.g2083.t1;Parent=g2083.t1 #PROT g2083.t1 g2083 MKRTVTAGAHKWLTIRPFPTTTACIDALRGEGYSIVASDLSNGAVDLASLFPISGSAYQASSTLTRLRQPHISPDIYQTDDSPYTLKERFAQWKLNGSSTPSRSAVGGSRIHSEEHGRVGDIRGEGVAEDAEGSTADNRDDNGSHVAGGAGVVPHMDWAKEVGGASGIEHESIDSPLTPMMPLLDGHSRPVAVVFGNEAIGITEEMRRGSDARFVIPMDGLVQSFNISVSVAVTLSHLRACGHVGRHLMTEKERLEVLYVWLHSNSKLSTAELAAAGMEPPHWMRKVTTRRLRRDETVG* # ORIGINAL: g6970.t1 original gene structure, not modified by PASA NODE_2310_length_6770_cov_40.5955 AUGUSTUS gene 826 5212 . - . ID=g6970;Name=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS mRNA 826 5212 . - . ID=g6970.t1;Parent=g6970;Name=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 4957 5212 . - . ID=g6970.t1.exon1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 4957 5212 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 4529 4608 . - . ID=g6970.t1.exon2;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 4529 4608 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 4125 4335 . - . ID=g6970.t1.exon3;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 4125 4335 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 3603 3757 . - . ID=g6970.t1.exon4;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 3603 3757 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 3225 3306 . - . ID=g6970.t1.exon5;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 3225 3306 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 2730 2887 . - . ID=g6970.t1.exon6;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 2730 2887 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 2436 2547 . - . ID=g6970.t1.exon7;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 2436 2547 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 2224 2328 . - . ID=g6970.t1.exon8;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 2224 2328 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 2045 2086 . - . ID=g6970.t1.exon9;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 2045 2086 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 1774 1850 . - . ID=g6970.t1.exon10;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 1774 1850 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 1391 1591 . - . ID=g6970.t1.exon11;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 1391 1591 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 1176 1278 . - . ID=g6970.t1.exon12;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 1176 1278 . - 0 ID=cds.g6970.t1;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 826 1037 . - . ID=g6970.t1.exon13;Parent=g6970.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 826 1037 . - 2 ID=cds.g6970.t1;Parent=g6970.t1 #PROT g6970.t1 g6970 MGAMGTSSTGTGDAPAVTSVAVDAALVARIASCPPGSTGLVVGTAAGAAVWALAAVRESADHHNRVHNDAGVDAQWDDACAAFPAGFEAVGSFCCVEGGQSREAAAKSFAKKVDKRLRRGSYFVLVCSVGSSDAPYVAAGVAGATPVPVTVTPRLWDGHVGWFVRVTATVATSLCVPVVPACDLASAIASEGRTAAESITANHVMWLDQGRNGLPVNVSAHTGNLGDVLPDGAEASENPKLKAYVKSTTDSVAQARIHVNFGTGDVIRVPLSASVTGWFTGECSSRDAAARLLACAAAQVRAATAVVASAFAASGLAASPNPVVLKFAPPGHSFEVALCRDLAVGDDDPAEAARRRLLHERYMLPVDRPFFRLSNAVSDVRRPPEGVRLADVHVGLSPSGVVGGVQSIVQGSYEYYHYMQDKFDDKGWGCAYRSLQTICSWLVRQGYSSRAVPSHAEIQRALVEMGDKDAKFQGSRQWIGSIEVSMCLDYFYNVSSKIMALNAGAELSERGRELARHFAVHGSPVMIGGGVLAHTIIGVDFNDQTGDLALLILDPHYTGHDDLAVVQDKGWCAWKKVEFFSPTAHYNLCLPQRPNTL* # ORIGINAL: g6969.t1 original gene structure, not modified by PASA NODE_2310_length_6770_cov_40.5955 AUGUSTUS gene 162 555 . + . ID=g6969;Name=g6969.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS mRNA 162 555 . + . ID=g6969.t1;Parent=g6969;Name=g6969.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 162 260 . + . ID=g6969.t1.exon1;Parent=g6969.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 162 260 . + 0 ID=cds.g6969.t1;Parent=g6969.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS exon 487 555 . + . ID=g6969.t1.exon2;Parent=g6969.t1 NODE_2310_length_6770_cov_40.5955 AUGUSTUS CDS 487 555 . + 0 ID=cds.g6969.t1;Parent=g6969.t1 #PROT g6969.t1 g6969 GSKVKVVAPPSASERRFSAWIGGSILASLSTFQQMWISRQEYEESGKSIVEKRCP* # ORIGINAL: g893.t1 original gene structure, not modified by PASA NODE_2994_length_4577_cov_36.719 AUGUSTUS gene 679 4577 . + . ID=g893;Name=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS mRNA 679 4577 . + . ID=g893.t1;Parent=g893;Name=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS exon 679 805 . + . ID=g893.t1.exon1;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS CDS 679 805 . + 0 ID=cds.g893.t1;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS exon 1053 1912 . + . ID=g893.t1.exon2;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS CDS 1053 1912 . + 2 ID=cds.g893.t1;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS exon 2553 2832 . + . ID=g893.t1.exon3;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS CDS 2553 2832 . + 0 ID=cds.g893.t1;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS exon 3281 3706 . + . ID=g893.t1.exon4;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS CDS 3281 3706 . + 2 ID=cds.g893.t1;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS exon 4225 4577 . + . ID=g893.t1.exon5;Parent=g893.t1 NODE_2994_length_4577_cov_36.719 AUGUSTUS CDS 4225 4577 . + 2 ID=cds.g893.t1;Parent=g893.t1 #PROT g893.t1 g893 MVLSEMHSHNHSSMFSPRALGLVAICAILLFARECVGAVLYGDLEFGCDGCKLQYPVVSLHPNGSVVVGADATPVDGQRSFQWTLANVDYTLHELYGGQNAALNDPGGVAVAFDALERVLLVHNTDPLSMTVRRYDPSIVPETSRRRRAQIITETTVSYSVSGQKSQPMVACDANDPASPVVVTFIHGPGPSYVLVISTVNLDAGLPTYTYTQIDGVQNGPYSLHVARNTATVAYGKGENITVSTWNASNVVTEPVSSFTVKMEQKSDSISQPDFVRLNNGDFIGAWTYAPAGAGSANSIVQLARFASDGTQLYSVATPAGNGAGGIKSAHPRIALSPDEATVTLTCYRSPNLASFEVILRRFRTDTGVAIDASPVVISNSPITGTDAVFLASAISPLSIATNSERTIVTYFDGAGVQTFMSDKCPQNILDSKVSSQSGLITCRRIVGDLVVDASSIFLSQTNAVVSISGSLSIIGVSASTLSGSFDNLVSIAGTLEITDNNKLTTLGTFGKLATLGNKGGSVASHIVRNALLCDAQTAANWATALSSSSMLFIYPSANIASTCGFGRGYYDRLVSLDRPTIHFGMHLFPLGSFNPRIASQALSAQFAISPDGDIAVSGVESVIGDPAATGMQISGPLGWVPMPSLCMSLCLCLCLWLWLWLWLWLWLWLWLWLWLWLWLWL # ORIGINAL: g1305.t1 original gene structure, not modified by PASA NODE_3931_length_2497_cov_28.8964 AUGUSTUS gene 1686 2245 . - . ID=g1305;Name=g1305.t1 NODE_3931_length_2497_cov_28.8964 AUGUSTUS mRNA 1686 2245 . - . ID=g1305.t1;Parent=g1305;Name=g1305.t1 NODE_3931_length_2497_cov_28.8964 AUGUSTUS exon 2190 2245 . - . ID=g1305.t1.exon1;Parent=g1305.t1 NODE_3931_length_2497_cov_28.8964 AUGUSTUS CDS 2190 2245 . - 0 ID=cds.g1305.t1;Parent=g1305.t1 NODE_3931_length_2497_cov_28.8964 AUGUSTUS exon 1686 1875 . - . ID=g1305.t1.exon2;Parent=g1305.t1 NODE_3931_length_2497_cov_28.8964 AUGUSTUS CDS 1686 1875 . - 1 ID=cds.g1305.t1;Parent=g1305.t1 #PROT g1305.t1 g1305 MAGKAIYTTVKGYDPNSKSFPHVTVEGVGELCEALAQTPGQTDTAGTQLKRILGGQRAGEIAVTVVGAVVVGAIAIARAVA* # PASA_UPDATE: g2945.t1, single gene model update, valid-1, status:[pasa:asmbl_8138,status:12], valid-1 NODE_5521_length_821_cov_108.529_potentialcontaminant . gene 1 821 . - . ID=g2945;Name=g2945.t1 NODE_5521_length_821_cov_108.529_potentialcontaminant . mRNA 1 821 . - . ID=g2945.t1;Parent=g2945;Name=g2945.t1 NODE_5521_length_821_cov_108.529_potentialcontaminant . five_prime_UTR 821 821 . - . ID=g2945.t1.utr5p1;Parent=g2945.t1 NODE_5521_length_821_cov_108.529_potentialcontaminant . exon 1 821 . - . ID=g2945.t1.exon1;Parent=g2945.t1 NODE_5521_length_821_cov_108.529_potentialcontaminant . CDS 1 820 . - 0 ID=cds.g2945.t1;Parent=g2945.t1;3_prime_partial=true #PROT g2945.t1 g2945 MTYDLAVEGLRRIYRPLNRLEDLKDKFAYSTQGSQESLRDFASRKRSEALCITEADARQIITDDDLCMTFLRGMKNQKVASICRNHRNLTEQTRRQHIDRGQPPPVLAVDFDMLSVYATNVEYDFPDLHVVSPSPDTTNATGHTSQKPSRFHAGAQVNSVAPALLAALQTPSHSSAGPSTSGSAVAHMSNKPKDTRRPFGSKSTRNTPSGQEKRGPKNMSATTYNDEARRARYLEFEGCVTCANLDHRADECPHSALGRYVRGNDKGKGPDNS # PASA_UPDATE: g828.t1, single gene model update, valid-1, status:[pasa:asmbl_8863,status:12], valid-1 NODE_683_length_19133_cov_40.1434 . gene 81 3960 . + . ID=g828;Name=g828.t1 NODE_683_length_19133_cov_40.1434 . mRNA 81 3960 . + . ID=g828.t1;Parent=g828;Name=g828.t1 NODE_683_length_19133_cov_40.1434 . five_prime_UTR 81 82 . + . ID=g828.t1.utr5p1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 81 238 . + . ID=g828.t1.exon1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 83 238 . + 0 ID=cds.g828.t1;Parent=g828.t1;5_prime_partial=true NODE_683_length_19133_cov_40.1434 . exon 607 720 . + . ID=g828.t1.exon2;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 607 720 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 963 1037 . + . ID=g828.t1.exon3;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 963 1037 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 1163 1369 . + . ID=g828.t1.exon4;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 1163 1369 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 1826 1996 . + . ID=g828.t1.exon5;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 1826 1996 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 2322 2462 . + . ID=g828.t1.exon6;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 2322 2462 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 2858 3027 . + . ID=g828.t1.exon7;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 2858 3027 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 3436 3508 . + . ID=g828.t1.exon8;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 3436 3508 . + 1 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . exon 3773 3960 . + . ID=g828.t1.exon9;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . CDS 3773 3943 . + 0 ID=cds.g828.t1;Parent=g828.t1 NODE_683_length_19133_cov_40.1434 . three_prime_UTR 3944 3960 . + . ID=g828.t1.utr3p1;Parent=g828.t1 #PROT g828.t1 g828 VDDVNYTEEDFAPYVGGALGSLFRLLAEVDDFDIKLTIANATSVIVDRLRQGIRPFAGDIFAVLPGLWKSSSEHNMFQSAVVSLIKAIAKGLGSMSVDMYGLVLPVIAYSCDLNQPASLYLVEEGLELWLVLLRYAPSSGGECTRLFGLFAALPGLFERGSETLETVLRIAESYALLDAPAIMKVHGHVIGAAFEALLNSLQEEGLRPALKVVAAYMAAAPEHADCFLPVLRWAAQSLAGKERIGLESMLYAVLSRAALSRMDVFFAAIDDTPDQPRLIPVIDDWLDNVSSIGEANRQRVCCFALASLLPVQHAVISERYGLVIAAIASLLDALANKDITAQAPDYLVMAVDFWDEESEVYPESERRKALSTRDVTMTTPLGAFVMSQLDAARVSLGQAEFDGRLARANPSAVATIQARLSMGQI* # PASA_UPDATE: g830.t1, single gene model update, valid-1, status:[pasa:asmbl_8862,status:12], valid-1 NODE_683_length_19133_cov_40.1434 . gene 14727 16463 . - . ID=g830;Name=g830.t1 NODE_683_length_19133_cov_40.1434 . mRNA 14727 16463 . - . ID=g830.t1;Parent=g830;Name=g830.t1 NODE_683_length_19133_cov_40.1434 . five_prime_UTR 16373 16463 . - . ID=g830.t1.utr5p1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . exon 16340 16463 . - . ID=g830.t1.exon1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . CDS 16340 16372 . - 0 ID=cds.g830.t1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . exon 15827 15895 . - . ID=g830.t1.exon2;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . CDS 15827 15895 . - 0 ID=cds.g830.t1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . exon 15499 15636 . - . ID=g830.t1.exon3;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . CDS 15499 15636 . - 0 ID=cds.g830.t1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . exon 14727 14928 . - . ID=g830.t1.exon4;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . CDS 14869 14928 . - 0 ID=cds.g830.t1;Parent=g830.t1 NODE_683_length_19133_cov_40.1434 . three_prime_UTR 14727 14868 . - . ID=g830.t1.utr3p1;Parent=g830.t1 #PROT g830.t1 g830 MEGDRKPDVNQDVKSGGASEEPINLKVVGADGAEIHFKIKRSTAMRKVMEAYCQRQGQRLDGVRFLFDGERIQPDQTAADIDLADGDSIDVMIEQTGGF* # ORIGINAL: g831.t1 original gene structure, not modified by PASA NODE_683_length_19133_cov_40.1434 AUGUSTUS gene 18148 18918 . + . ID=g831;Name=g831.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS mRNA 18148 18918 . + . ID=g831.t1;Parent=g831;Name=g831.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS exon 18148 18918 . + . ID=g831.t1.exon1;Parent=g831.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS CDS 18148 18918 . + 0 ID=cds.g831.t1;Parent=g831.t1 #PROT g831.t1 g831 MATRNAVSSSYAQPQLPVPTLGLGAKQIKEQSTGDAFELFYLLIANGDYSKAGKDALPCLANPHNDATALDQHLSQQGFTNVLVRDEDVDGQAELQGDNRTRDRILFDADREMIENAVEEFATRLSAFKEKQTEKRVVALFFYAGHGVQIDNCNYLVPTSFVPGKIPRHDISLYSLNNVLNSLNDASVFLSLVFLDACRDNPFAHKYPSSDRSAQKGASSATKVAEVRLKPMHSSATCVIYSNAENKVAKDGPRGG* # ORIGINAL: g829.t1 original gene structure, not modified by PASA NODE_683_length_19133_cov_40.1434 AUGUSTUS gene 5670 9727 . - . ID=g829;Name=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS mRNA 5670 9727 . - . ID=g829.t1;Parent=g829;Name=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS exon 9452 9727 . - . ID=g829.t1.exon1;Parent=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS CDS 9452 9727 . - 0 ID=cds.g829.t1;Parent=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS exon 9012 9229 . - . ID=g829.t1.exon2;Parent=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS CDS 9012 9229 . - 0 ID=cds.g829.t1;Parent=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS exon 5670 8781 . - . ID=g829.t1.exon3;Parent=g829.t1 NODE_683_length_19133_cov_40.1434 AUGUSTUS CDS 5670 8781 . - 1 ID=cds.g829.t1;Parent=g829.t1 #PROT g829.t1 g829 MLTMRCSSFRGPCVVACTTSILVLIFAGDIVGGLEEHGSTTSAQHQAAVDAHAGHGLNGDIASRSLVQLTPLTVYATADVYGNFVPAKDSSQIVNEFIFGAQGQEFGGLARIATYLREGIANATAENPVLVLDTGFFLGLSTFNQFASQRKILEMAKSFGYAVFGVATSEFHAGVSDFLNNYDGLGLTVVSSNFVFNSDPNNPTVETPLQRNIRPYAIVTKGNISIGVIGFTPSTFCLTAIGVCGEGPNKIGAVNDILDANTIPNAMARLLAASTKPPDVIIAMMGMTFSESFPASFNALARAGVDIVLCTDGIYPNVANTSYIPTAAIEHVDAVSQRKTVVASPLANGKSVARFEVAVSTDGTNFGSRVSLTSGRQQILGDCRSLSIPRTDCVVPAADINATISAMDAEVSRLVNTAIIGSLVTPLSGGLYYCRFRECGVGDLVTDAMRAILPGCKIAFTNAGGVRSAMPSVNVTTRAVLDVVPFRNPFSVFSVRGSVVIDAIRHGLTLVGNLTEQPSTVQTGTGRFLQMSGMRIRYNPFNQQETRLLSVEYEASPGIFEPLNSFNVYRCCTPTVVLDGADGFTMLKPNAVQRLDLSITQDAVVIQYLGIHSPANITDSKRLTIDNTTQSPICIPACVTGRCTKDFVCECDSEWVGTDCSIPAPVDLCKVHARKGSILLRATSRVRSYAKGGIALISIFAIIFAIEVIAVPFITRRFARMVQRTTTAPASYLKTGRLTLQNIVKLATTFLQIVQIHDIALNVRVSHSFVDTAGTAFSSAGVSSFSASFAWYFWVVMSATLLWILYAVIFVADGGTALRRTELGRVFLFPAHQILQIWTTAGFIPTLLNGMRAFHCWYFDDVAYMATEGVCNVRCWTSAVHWAYVSVGACVILVYYPLAATSAILWQDLEPQLDVRYRPSYFIVDPLFKVALVFLRVFAIESPYVFLPLVIIVDILSAAYAVQQRPCYLSWVNTIIAVAYVSGALTASVLLVGSASSAVNVFYALPAVWALCIAGLFIFFKLRYPHPLLVRVGQSPESGEKQARQLLMALKDVFQRRVSAAHHLSISQVSFGTSRVLPLPASQNATTVPAQSLHSLANGVGCTSMRETIKEATTTGEISQPVYEWLQARSSFQRSQNRWLLLLRAGASSDAEFISALSELYEDCKEDEAHTVQDLDVTSTEVVHDDAVGHSRTSVAHEPAL* # ORIGINAL: g3151.t1 original gene structure, not modified by PASA NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS gene 1989 2366 . + . ID=g3151;Name=g3151.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS mRNA 1989 2366 . + . ID=g3151.t1;Parent=g3151;Name=g3151.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS exon 1989 2366 . + . ID=g3151.t1.exon1;Parent=g3151.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS CDS 1989 2366 . + 0 ID=cds.g3151.t1;Parent=g3151.t1 #PROT g3151.t1 g3151 MTHPTAGKVRDPSPIIAQVRAGDLFGVEVSKPIKADGDPMTVVAHRMKYDEAHSYALSQSQTDADREHFLGCVLENVHAYIETCTAREPTTQEVGEFGEDVLLLLSLNVAGVRRLSVEETVAVIQ* # ORIGINAL: g3152.t1 original gene structure, not modified by PASA NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS gene 2963 5472 . + . ID=g3152;Name=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS mRNA 2963 5472 . + . ID=g3152.t1;Parent=g3152;Name=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS exon 2963 3193 . + . ID=g3152.t1.exon1;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS CDS 2963 3193 . + 0 ID=cds.g3152.t1;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS exon 3501 3613 . + . ID=g3152.t1.exon2;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS CDS 3501 3613 . + 0 ID=cds.g3152.t1;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS exon 4047 4619 . + . ID=g3152.t1.exon3;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS CDS 4047 4619 . + 1 ID=cds.g3152.t1;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS exon 5163 5472 . + . ID=g3152.t1.exon4;Parent=g3152.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant AUGUSTUS CDS 5163 5472 . + 1 ID=cds.g3152.t1;Parent=g3152.t1 #PROT g3152.t1 g3152 MDSAVVGNSELDALLGRSGGPEAVATTQASTCNLTVTNESVLFTTADGEIHLGVGAPDRSLLKISANVLAKAASDALGAEDAWCLLQYGPTKGLGRFRRSLAQFLSVEYGRNVESERLMLTSGATAGLSLVLQMYARTGATVFVENATYFLAINVFRDVGLNIVPVESDAEGMRIDCLASAVQDARAQGDAFTHANFGISALVYLVPTFGNPTGRTLSIERRQQLVSLAREHSLLIVCDDVYECLGFDSSETDETHRKSVPPTLVSYDTAGRHVVSNCSFSKLFGPGLRLGWIEAGRAILDVLSDRCETLCSVLEQNLPPLASFLRPRGGFFVWIRLPSGCDASSLLTIAREQFGVAFQPGNRFSVARTHSDYIRLSFAYYDDESLTIGATKLCDAIRYMLGQKNSIQ* # PASA_UPDATE: g3150.t1, single gene model update, valid-1, status:[pasa:asmbl_4434,status:12], valid-1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant . gene 80 977 . + . ID=g3150;Name=g3150.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant . mRNA 80 977 . + . ID=g3150.t1;Parent=g3150;Name=g3150.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant . five_prime_UTR 80 80 . + . ID=g3150.t1.utr5p1;Parent=g3150.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant . exon 80 977 . + . ID=g3150.t1.exon1;Parent=g3150.t1 NODE_2496_length_6064_cov_43.6089_potentialcontaminant . CDS 81 677 . + 0 ID=cds.g3150.t1;Parent=g3150.t1;5_prime_partial=true NODE_2496_length_6064_cov_43.6089_potentialcontaminant . three_prime_UTR 678 977 . + . ID=g3150.t1.utr3p1;Parent=g3150.t1 #PROT g3150.t1 g3150 HPHAWAIDEYITRYIVKDFRFVKDKRSQARFIYETIPEAARTLLKVSQGGQSLTEQNANFPSSPNAEEVVVIGVEMLGRRKSSTAYVRMVPGDGVARVNNRALSDYFVKPLDRKTVIEPLIATGLLGKYDIDLDARGGGPTGQAGAARLAVAKAIAELHPDVSPFLKSSGFLYRDPRNVESKKPGQKKARKKFQWVKR* # ORIGINAL: g7381.t1 original gene structure, not modified by PASA NODE_7007_length_481_cov_40.5517 AUGUSTUS gene 2 481 . + . ID=g7381;Name=g7381.t1 NODE_7007_length_481_cov_40.5517 AUGUSTUS mRNA 2 481 . + . ID=g7381.t1;Parent=g7381;Name=g7381.t1 NODE_7007_length_481_cov_40.5517 AUGUSTUS exon 2 481 . + . ID=g7381.t1.exon1;Parent=g7381.t1 NODE_7007_length_481_cov_40.5517 AUGUSTUS CDS 2 481 . + 0 ID=cds.g7381.t1;Parent=g7381.t1 #PROT g7381.t1 g7381 TAGILNTTVSQTFVTTSINQLQDIGRVEFDLYANNKAGNSTKIGKVTVDDFQIVQGFNQLQNVKVDLIQGTNNTDAVEAIRILLGNYNSGKPTNLIIQGPTACASPFFLNTATLPAVLNGAEMHTLAVAANINLQSVLGGGVYLTAYNPYNLPVTQTKMD # PASA_UPDATE: g12974.t1, single gene model update, valid-1, status:[pasa:asmbl_6396,status:3], valid-1 NODE_3673_length_2983_cov_42.9439 . gene 454 2471 . + . ID=g12974;Name=g12974.t1 NODE_3673_length_2983_cov_42.9439 . mRNA 454 2471 . + . ID=g12974.t1;Parent=g12974;Name=g12974.t1 NODE_3673_length_2983_cov_42.9439 . five_prime_UTR 454 506 . + . ID=g12974.t1.utr5p1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . exon 454 584 . + . ID=g12974.t1.exon1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . CDS 507 584 . + 0 ID=cds.g12974.t1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . exon 768 889 . + . ID=g12974.t1.exon2;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . CDS 768 889 . + 0 ID=cds.g12974.t1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . exon 1160 1262 . + . ID=g12974.t1.exon3;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . CDS 1160 1262 . + 1 ID=cds.g12974.t1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . exon 1573 1738 . + . ID=g12974.t1.exon4;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . CDS 1573 1738 . + 0 ID=cds.g12974.t1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . exon 2034 2471 . + . ID=g12974.t1.exon5;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . CDS 2034 2185 . + 2 ID=cds.g12974.t1;Parent=g12974.t1 NODE_3673_length_2983_cov_42.9439 . three_prime_UTR 2186 2471 . + . ID=g12974.t1.utr3p1;Parent=g12974.t1 #PROT g12974.t1 g12974 MAAVKSALDVSASSVMEFIFLVGKLKATKRTGWVNNKIEKPESIADHMYRMGVMAMLFDDPSIDRNRCIKMAIVHDMAESIVGDITPHDPVTSEEKHRMEEAAMATIRDEMLASSPVGVEMYSLWQEYEACTTNEALIVKDLDKFDMIVQAFEYERDQHRTGSLEEFFKSTRGKFKHPAVQRWVAQLEAVRDAHALAAPAEKKDAV* # PASA_UPDATE: g6209.t1, single gene model update, valid-1, status:[pasa:asmbl_6628,status:12], valid-1 NODE_3835_length_2656_cov_31.3111 . gene 285 2491 . - . ID=g6209;Name=g6209.t1 NODE_3835_length_2656_cov_31.3111 . mRNA 285 2491 . - . ID=g6209.t1;Parent=g6209;Name=g6209.t1 NODE_3835_length_2656_cov_31.3111 . five_prime_UTR 2491 2491 . - . ID=g6209.t1.utr5p1;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . exon 2361 2491 . - . ID=g6209.t1.exon1;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . CDS 2361 2490 . - 0 ID=cds.g6209.t1;Parent=g6209.t1;5_prime_partial=true NODE_3835_length_2656_cov_31.3111 . exon 2009 2186 . - . ID=g6209.t1.exon2;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . CDS 2009 2186 . - 2 ID=cds.g6209.t1;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . exon 1563 1635 . - . ID=g6209.t1.exon3;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . CDS 1563 1635 . - 1 ID=cds.g6209.t1;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . exon 634 1294 . - . ID=g6209.t1.exon4;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . CDS 634 1294 . - 0 ID=cds.g6209.t1;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . exon 285 451 . - . ID=g6209.t1.exon5;Parent=g6209.t1 NODE_3835_length_2656_cov_31.3111 . CDS 285 451 . - 2 ID=cds.g6209.t1;Parent=g6209.t1;3_prime_partial=true #PROT g6209.t1 g6209 FAEKDGPTTIVFENADTGSTQPPDIKGGTLLKLVERLTYPQYADPNYTLEFLTTYRSFCTPETLLTLLIQRYNIPVPPAVDGNKNREGLEKFNKGYKGPVRLRVFNVCRNWVDKHFYDFQNNGDLLKSFIQFLGKFLSEDSKKFGKSVEALTKSIKAKRSGDAKEKKETHFSDKPPEILHEKNISPENYDILTLNPTEIARQLTLIESQLYRNIMPSELVGQAWNKDGKEDRAPNVLAMSARFNTVSRWVATSIIDTPNLEERREVVHRFLDVLVALLEINNFNGVMELISGLEATSVYRLKATWAEINPKKKAMLDQAKTMMAREGNFKNFRAKLHSINPPCIPFFGMYLSDLTFIEDGNPDKIKDTDLINFSKRRRVAAVIGEIQQYQNQPYNLQEQEAIR # ORIGINAL: g4517.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 8647 9483 . - . ID=g4517;Name=g4517.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 8647 9483 . - . ID=g4517.t1;Parent=g4517;Name=g4517.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 8647 9483 . - . ID=g4517.t1.exon1;Parent=g4517.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 8647 9483 . - 0 ID=cds.g4517.t1;Parent=g4517.t1 #PROT g4517.t1 g4517 MATAEVPTAIATALEMPKSYANGFLTPTLNSYGFMIGTEDDDTSARFVQHALSCTGKILDVGCAYGNTLLDIVRQRRQSSFGVHQSQIVANDLDGRHLEIMRSRADAEFGADIASQFLELLPGPFPDVCMDPSFLKHSAGSFDCVRVANVFHFFNGEQIERSAHALFALLRPGGKVYITALSPYTTSYLKFVPQYEQGKKEGHPFPGYISDRRGIYDGYPTLLPNEFHGLDPDVLSRVYRAAGFEIEKAEFYSREKFGKDITFDGREAVGLIAVRVAV* # PASA_UPDATE: g4516.t1, single gene model update, valid-1, status:[pasa:asmbl_2952,status:3], valid-1 NODE_18_length_65365_cov_40.3356 . gene 6131 8351 . - . ID=g4516;Name=g4516.t1 NODE_18_length_65365_cov_40.3356 . mRNA 6131 8351 . - . ID=g4516.t1;Parent=g4516;Name=g4516.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 8265 8351 . - . ID=g4516.t1.utr5p1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 8182 8351 . - . ID=g4516.t1.exon1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 8182 8264 . - 0 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 7645 7847 . - . ID=g4516.t1.exon2;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 7645 7847 . - 1 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 7282 7466 . - . ID=g4516.t1.exon3;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 7282 7466 . - 2 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 7003 7073 . - . ID=g4516.t1.exon4;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 7003 7073 . - 0 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 6676 6820 . - . ID=g4516.t1.exon5;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 6676 6820 . - 1 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . exon 6131 6322 . - . ID=g4516.t1.exon6;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . CDS 6203 6322 . - 0 ID=cds.g4516.t1;Parent=g4516.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 6131 6202 . - . ID=g4516.t1.utr3p1;Parent=g4516.t1 #PROT g4516.t1 g4516 MDVAELPQKRFYRQRAHVNPHNDHSFEYPIMPSEMDWSTLFPAHFTPRKADGGEGEEPSAKKQRVDAADVSSGAVVPSQKEVEIADIGCGFGGFLVELGSLFPDTLCLGMEIRMKVSDYVRDRIIALRERHPGDYQNIAVMRTNAMKYMPNLFRKAQLKKIFFLFPDPHFKKTKHKWRIVSSELLCEYAYCLTVGGLLYTITDVRDLHEWMVSHIQSHPLFERVSDADLEGDIAVPKMFGSSEEAQKVTRNNGEKLLAVFRRVADNTD* # ORIGINAL: g4525.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 37663 38706 . - . ID=g4525;Name=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 37663 38706 . - . ID=g4525.t1;Parent=g4525;Name=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 38561 38706 . - . ID=g4525.t1.exon1;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 38561 38706 . - 0 ID=cds.g4525.t1;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 38304 38439 . - . ID=g4525.t1.exon2;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 38304 38439 . - 1 ID=cds.g4525.t1;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 38006 38138 . - . ID=g4525.t1.exon3;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 38006 38138 . - 0 ID=cds.g4525.t1;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 37663 37850 . - . ID=g4525.t1.exon4;Parent=g4525.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 37663 37850 . - 2 ID=cds.g4525.t1;Parent=g4525.t1 #PROT g4525.t1 g4525 MSASKAAAFRLRARQICTDTILLCDKWEEASGRSLHILNKIVNTHLQKGYIDCEHWGALTPLGRCTSIPSLMAASNYAESASLLQSLDTHMEKLTRLSKKMDACASQLRSLCDTAQAELGRSFVSDDPIAPALSTCRAVEMVSEIATAHAHDLRLRTAVAGDVAMTLERATLSAYIAAWHYQPSVTAAADAIQMLRMTVL* # PASA_UPDATE: g4514.t1, single gene model update, valid-1, status:[pasa:asmbl_2951,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 188 1352 . - . ID=g4514;Name=g4514.t1 NODE_18_length_65365_cov_40.3356 . mRNA 188 1352 . - . ID=g4514.t1;Parent=g4514;Name=g4514.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 1191 1352 . - . ID=g4514.t1.utr5p1;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . exon 579 1352 . - . ID=g4514.t1.exon1;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . CDS 579 1190 . - 0 ID=cds.g4514.t1;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . exon 347 442 . - . ID=g4514.t1.exon2;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . CDS 347 442 . - 0 ID=cds.g4514.t1;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . exon 188 235 . - . ID=g4514.t1.exon3;Parent=g4514.t1 NODE_18_length_65365_cov_40.3356 . CDS 188 235 . - 0 ID=cds.g4514.t1;Parent=g4514.t1;3_prime_partial=true #PROT g4514.t1 g4514 MRLRLSTRAITQRPLQSLLRRIVATLFEICDLTRLISSDVGTRPSCVSLDTSSSALLGWPRRRATEMSVAATVGNRRGYMLAAVVLLLAILYLAFHPVLVREIRSRGSFVLWMAGTDSDRLREDELVSVDAQWRLHELQEKYNEASCATVSPHTTKNGRRGWLTAMINDNFVIPSVALSYVLKKFSCIHDMIALVTDGVSEDGRDALRAVGYDVRVVEPLDCNWMDVQLGREKSNRGIVGTHMRFHAWNFTE # ORIGINAL: g4518.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 10052 11493 . + . ID=g4518;Name=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 10052 11493 . + . ID=g4518.t1;Parent=g4518;Name=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 10052 10143 . + . ID=g4518.t1.exon1;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 10052 10143 . + 0 ID=cds.g4518.t1;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 10486 10592 . + . ID=g4518.t1.exon2;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 10486 10592 . + 1 ID=cds.g4518.t1;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 10706 10774 . + . ID=g4518.t1.exon3;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 10706 10774 . + 2 ID=cds.g4518.t1;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 11056 11099 . + . ID=g4518.t1.exon4;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 11056 11099 . + 2 ID=cds.g4518.t1;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 11380 11493 . + . ID=g4518.t1.exon5;Parent=g4518.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 11380 11493 . + 0 ID=cds.g4518.t1;Parent=g4518.t1 #PROT g4518.t1 g4518 MPNVSADTAGAIVSLATSQDDRFPADNIIDGNEATFWPTTGMFPQEFIITFPSSTRIKSIKTWTCDIKDVRIEYSASEKPQQFEMLMELELDHVSDRLQVKENRFQSVVARHVKFVIMAAYEDFCSVHRLNIDGEPSGDRD* # ORIGINAL: g4529.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 45498 49488 . - . ID=g4529;Name=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 45498 49488 . - . ID=g4529.t1;Parent=g4529;Name=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 47056 49488 . - . ID=g4529.t1.exon1;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 47056 49488 . - 0 ID=cds.g4529.t1;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 46321 46879 . - . ID=g4529.t1.exon2;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 46321 46879 . - 0 ID=cds.g4529.t1;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 45994 46107 . - . ID=g4529.t1.exon3;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 45994 46107 . - 2 ID=cds.g4529.t1;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 45725 45878 . - . ID=g4529.t1.exon4;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 45725 45878 . - 2 ID=cds.g4529.t1;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 45498 45591 . - . ID=g4529.t1.exon5;Parent=g4529.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 45498 45591 . - 1 ID=cds.g4529.t1;Parent=g4529.t1 #PROT g4529.t1 g4529 MDNPYKRKRDAAAAPATAAGSQPSQPSQPSQTSQAVGVGAAKRGRWDEPEDAGMSFEEELALLEEQMPTDMELMDLPEYADGSVEDAARRVRWRRPPIPELDVARDAVAFQQLETDFYMGDPLAGMPGARAGVVPIVRMYGVTMAGNSVVCHVHGFLPYFYIKAPEGFRETDCGYLKDQLGRALIAAERGKAPPSEPVLAVEIVQRENLLGFGGNKKAPFLLITLSLPKFVSSARRILEGKSSVTVSLQPWGNLAVMTYESNLEFPVRFMVDRKVVGCNWIELPAGKYAVREREKHMTLAQMEFDVAYDAFVSHAPEGEWSHIAPIRVLSFDIECAGRKGIFPEPEHDPIIQIANMVIRQGEARPFVRNVFTLDTCANIAGSDVISFQTEKDLLARWADFVRECDPDIITGYNIVNFDLPYLLRRAEHLRVPHFNLLGRIRGQPTKMRDTKFSSKAYGTRESKIINTEGRCQFDVLQILQRDYKLRSYTLNAVSAHFLGEQKEDVQHSIITDLQHGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVPFSYLLTRGQQIKVVSQLFRKSREQGLVIPALSAQGSEEQYEGATVIEPRRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLPNKEHERLASDEYIRTPSGDYFVKASVRKGILPEILEDLLNARSRAKNDLKKETDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLEISSSVTAFGRQMIQRTKELVEERYALSNGHQYDAQVIYGDTDSVMVRFGCQDLAEAMKLGKDAADFVSGHFVKPIKLEFEKVYFPYLLINKKRYAGLYWSKPDAFDKMDCKGIETVRRDNCPLAKNLIDACLRNILIERNVPLAVQHVKDSISDLLCNRIDISQLVITKALSKTGDDYAGKQAHVELAERMRKRDAGSAPTLGDRVPYVIIKAAKGAAAYQKSEDPIYVLENNIPIDTRYYLENQLSKPLMRIFEPILGEAKAQNLLNGDHTRTIAVATPTVGGLMKFTKKVEKCIGCKVPLQNNELAVCKHCRERESELYQKEVVALNILEDRFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDVADQHQLIKRFDGEW* # PASA_UPDATE: g4520.t1, single gene model update, valid-1, status:[pasa:asmbl_2953,status:3], valid-1 # PASA_UPDATE: g4520.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2954,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 14863 17711 . - . ID=g4520;Name=g4520.t1 NODE_18_length_65365_cov_40.3356 . mRNA 14863 17711 . - . ID=g4520.t1;Parent=g4520;Name=g4520.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 17624 17711 . - . ID=g4520.t1.utr5p1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 17455 17517 . - . ID=g4520.t1.utr5p2;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 17131 17262 . - . ID=g4520.t1.utr5p3;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 17624 17711 . - . ID=g4520.t1.exon1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 17455 17517 . - . ID=g4520.t1.exon2;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 16967 17262 . - . ID=g4520.t1.exon3;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 16967 17130 . - 0 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 16540 16773 . - . ID=g4520.t1.exon4;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 16540 16773 . - 1 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 16234 16290 . - . ID=g4520.t1.exon5;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 16234 16290 . - 1 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 15769 15935 . - . ID=g4520.t1.exon6;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 15769 15935 . - 1 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 15290 15408 . - . ID=g4520.t1.exon7;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 15290 15408 . - 2 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . exon 14863 15137 . - . ID=g4520.t1.exon8;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . CDS 15069 15137 . - 0 ID=cds.g4520.t1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 14863 15068 . - . ID=g4520.t1.utr3p1;Parent=g4520.t1 NODE_18_length_65365_cov_40.3356 . mRNA 14886 17569 . - . ID=g4520.t1.1.5b6be70a;Parent=g4520;Name=g4520.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 17455 17569 . - . ID=g4520.t1.1.5b6be70a.utr5p1;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . five_prime_UTR 17131 17258 . - . ID=g4520.t1.1.5b6be70a.utr5p2;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 17455 17569 . - . ID=g4520.t1.1.5b6be70a.exon1;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 16967 17258 . - . ID=g4520.t1.1.5b6be70a.exon2;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 16967 17130 . - 0 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 16540 16773 . - . ID=g4520.t1.1.5b6be70a.exon3;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 16540 16773 . - 1 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 16234 16290 . - . ID=g4520.t1.1.5b6be70a.exon4;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 16234 16290 . - 1 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 15769 15935 . - . ID=g4520.t1.1.5b6be70a.exon5;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 15769 15935 . - 1 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 15290 15408 . - . ID=g4520.t1.1.5b6be70a.exon6;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 15290 15408 . - 2 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . exon 14886 15137 . - . ID=g4520.t1.1.5b6be70a.exon7;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . CDS 15069 15137 . - 0 ID=cds.g4520.t1.1.5b6be70a;Parent=g4520.t1.1.5b6be70a NODE_18_length_65365_cov_40.3356 . three_prime_UTR 14886 15068 . - . ID=g4520.t1.1.5b6be70a.utr3p1;Parent=g4520.t1.1.5b6be70a #PROT g4520.t1 g4520 MADEAGVRYFCHACNDTVEVRRGDTGSLACAQCGGEFVEEVEDGSEELENLREPQRGQVNIDDGSQGIALNQFMQNLITMMLRPAGHDGPGAGAAFVGHAHPTEGDAEDGAYNEDGMDAGDDAVPGMPAHVLALLQQIVQPGINAGLSGFGIPPFLNSDPGNYVWGQRSFDEIISRLMEQTAGQGVPPASDDIIASLPTISISKDDTEQGLECAVCKEAFALASTATQLPNCMHKFHADCVIPWLKMHGNCPVCRKDVREGSSAGGASS* #PROT g4520.t1.1.5b6be70a g4520 MADEAGVRYFCHACNDTVEVRRGDTGSLACAQCGGEFVEEVEDGSEELENLREPQRGQVNIDDGSQGIALNQFMQNLITMMLRPAGHDGPGAGAAFVGHAHPTEGDAEDGAYNEDGMDAGDDAVPGMPAHVLALLQQIVQPGINAGLSGFGIPPFLNSDPGNYVWGQRSFDEIISRLMEQTAGQGVPPASDDIIASLPTISISKDDTEQGLECAVCKEAFALASTATQLPNCMHKFHADCVIPWLKMHGNCPVCRKDVREGSSAGGASS* # ORIGINAL: g4521.t2 original gene structure, not modified by PASA # ORIGINAL: g4521.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 18052 21300 . + . ID=g4521;Name=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 18052 20133 . + . ID=g4521.t2;Parent=g4521;Name=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18052 18153 . + . ID=g4521.t2.exon1;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18052 18153 . + 0 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18293 18417 . + . ID=g4521.t2.exon2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18293 18417 . + 0 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18576 18951 . + . ID=g4521.t2.exon3;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18576 18951 . + 1 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19176 19315 . + . ID=g4521.t2.exon4;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19176 19315 . + 0 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19528 19726 . + . ID=g4521.t2.exon5;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19528 19726 . + 1 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19936 20133 . + . ID=g4521.t2.exon6;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19936 20133 . + 0 ID=cds.g4521.t2;Parent=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 18052 21300 . + . ID=g4521.t1;Parent=g4521;Name=g4521.t2 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18052 18153 . + . ID=g4521.t1.exon1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18052 18153 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18293 18417 . + . ID=g4521.t1.exon2;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18293 18417 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 18576 18951 . + . ID=g4521.t1.exon3;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 18576 18951 . + 1 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19176 19315 . + . ID=g4521.t1.exon4;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19176 19315 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19528 19726 . + . ID=g4521.t1.exon5;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19528 19726 . + 1 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 19936 20093 . + . ID=g4521.t1.exon6;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 19936 20093 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 20347 20515 . + . ID=g4521.t1.exon7;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 20347 20515 . + 1 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 20637 20807 . + . ID=g4521.t1.exon8;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 20637 20807 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 20987 21058 . + . ID=g4521.t1.exon9;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 20987 21058 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 21190 21300 . + . ID=g4521.t1.exon10;Parent=g4521.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 21190 21300 . + 0 ID=cds.g4521.t1;Parent=g4521.t1 #PROT g4521.t2 g4521 MASPAKVSLVEEKDQLQGLNVRLEVLIQRQREQQERINFLENENAKQRESHRIELETVRRMFEGELSDARQVVVELRLIDETAKAKAQEQLNSERNAGRSEELAKKVAELTTIRADHEERLERFSRERAVRDAELRRVKEECETQLKAIYTLRLEKDALSKTLEAVRGELEAEALIRVDVQNVNQSLREELAFKTQLAQEELRKAKEELETSFVERDNLIRRLKREFNEKLSDALAECREQAEIESARYREEIETKYKERIDILRAQAERDAAILGSVKQENIGLVSELEGTRSELSTARSRLQVHEERIHTLQVEVSRIRETSESAIRHKESLVQAAQKQLLEKEGDYDDLLGIKMQLDSEIAQYRYLALLHCTYCTV* #PROT g4521.t1 g4521 MASPAKVSLVEEKDQLQGLNVRLEVLIQRQREQQERINFLENENAKQRESHRIELETVRRMFEGELSDARQVVVELRLIDETAKAKAQEQLNSERNAGRSEELAKKVAELTTIRADHEERLERFSRERAVRDAELRRVKEECETQLKAIYTLRLEKDALSKTLEAVRGELEAEALIRVDVQNVNQSLREELAFKTQLAQEELRKAKEELETSFVERDNLIRRLKREFNEKLSDALAECREQAEIESARYREEIETKYKERIDILRAQAERDAAILGSVKQENIGLVSELEGTRSELSTARSRLQVHEERIHTLQVEVSRIRETSESAIRHKESLVQAAQKQLLEKEGDYDDLLGIKMQLDSEIAQYRSLLEGEEARLGLSPASERRRRPAASPGSPFSSRKRQRVAETVLRAVTVKTGDVVIQDVDRNGEFVRLSNPTDKDINLGGWTIKNVADGKAVAHKFSSKQTLTAGQSLTVWTPKGKGKAKTGEPVWRSQPIFEKSGAQLVLQNEENEVVTQAEVREFEEEVAAASGDGNNCVIS* # PASA_UPDATE: g4527.t1, single gene model update, valid-1, status:[pasa:asmbl_2956,status:3], valid-1 NODE_18_length_65365_cov_40.3356 . gene 41643 43358 . - . ID=g4527;Name=g4527.t1 NODE_18_length_65365_cov_40.3356 . mRNA 41643 43358 . - . ID=g4527.t1;Parent=g4527;Name=g4527.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 43152 43358 . - . ID=g4527.t1.utr5p1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . exon 43136 43358 . - . ID=g4527.t1.exon1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . CDS 43136 43151 . - 0 ID=cds.g4527.t1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . exon 42969 43048 . - . ID=g4527.t1.exon2;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . CDS 42969 43048 . - 2 ID=cds.g4527.t1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . exon 42581 42790 . - . ID=g4527.t1.exon3;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . CDS 42581 42790 . - 0 ID=cds.g4527.t1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . exon 42331 42411 . - . ID=g4527.t1.exon4;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . CDS 42331 42411 . - 0 ID=cds.g4527.t1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . exon 41643 42195 . - . ID=g4527.t1.exon5;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . CDS 42076 42195 . - 0 ID=cds.g4527.t1;Parent=g4527.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 41643 42075 . - . ID=g4527.t1.utr3p1;Parent=g4527.t1 #PROT g4527.t1 g4527 MEGMQVCIPSPVRPLKRKQYDGFDDLYAIPQMKRHEVDPRVCDDSAMRETYLPYEQPLVWQGQLQQNYPVHVPEHAEMPKKITESDFPDVSMMSMRQRSVYQNMQDEGACANNENILSMDHTLMKHVQRTSKPPPGTFSLGYRANCPRCLRREPGHLAHILDERGNAV* # PASA_UPDATE: g4530.t1, single gene model update, valid-1, status:[pasa:asmbl_2967,status:12],[pasa:asmbl_2968,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 50196 53021 . + . ID=g4530;Name=g4530.t1 NODE_18_length_65365_cov_40.3356 . mRNA 50196 53021 . + . ID=g4530.t1;Parent=g4530;Name=g4530.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 50196 50422 . + . ID=g4530.t1.utr5p1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 50196 50426 . + . ID=g4530.t1.exon1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 50423 50426 . + 0 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 50588 50803 . + . ID=g4530.t1.exon2;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 50588 50803 . + 2 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 51325 51388 . + . ID=g4530.t1.exon3;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 51325 51388 . + 2 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 51918 52029 . + . ID=g4530.t1.exon4;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 51918 52029 . + 1 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 52147 52194 . + . ID=g4530.t1.exon5;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 52147 52194 . + 0 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 52409 52539 . + . ID=g4530.t1.exon6;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 52409 52539 . + 0 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . exon 52679 53021 . + . ID=g4530.t1.exon7;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . CDS 52679 52715 . + 1 ID=cds.g4530.t1;Parent=g4530.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 52716 53021 . + . ID=g4530.t1.utr3p1;Parent=g4530.t1 #PROT g4530.t1 g4530 MGGWFSTLFSRLWGEKELRILILGLDGAGKTTILYRCGAEKRYPMPSVDYSPKFPSDSGSHKPHYFPLLLQVAVWDLGGEASRPSHRVLALGVEWPYWRCYYANTDAVIYVVDSADRDRIGISKQELVSMLEEEELKDAVLMVFANKQDVEGAMKPTEVSESLGLSLLKNRTWSIFKTSAVKGEGLEDAMEWLVNTIKGSTNQ* # PASA_UPDATE: g4524.t1, single gene model update, valid-1, status:[pasa:asmbl_2965,status:3], valid-1 NODE_18_length_65365_cov_40.3356 . gene 32196 37202 . + . ID=g4524;Name=g4524.t1 NODE_18_length_65365_cov_40.3356 . mRNA 32196 37202 . + . ID=g4524.t1;Parent=g4524;Name=g4524.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 32196 32349 . + . ID=g4524.t1.utr5p1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 32607 32629 . + . ID=g4524.t1.utr5p2;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 32196 32349 . + . ID=g4524.t1.exon1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 32607 32723 . + . ID=g4524.t1.exon2;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 32630 32723 . + 0 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 32904 33277 . + . ID=g4524.t1.exon3;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 32904 33277 . + 2 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 33586 33913 . + . ID=g4524.t1.exon4;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 33586 33913 . + 0 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 34098 34137 . + . ID=g4524.t1.exon5;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 34098 34137 . + 2 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 34385 34462 . + . ID=g4524.t1.exon6;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 34385 34462 . + 1 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 34701 34928 . + . ID=g4524.t1.exon7;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 34701 34928 . + 1 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 35136 35195 . + . ID=g4524.t1.exon8;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 35136 35195 . + 1 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 35521 35706 . + . ID=g4524.t1.exon9;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 35521 35706 . + 1 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 35989 36122 . + . ID=g4524.t1.exon10;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 35989 36122 . + 1 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . exon 36470 37202 . + . ID=g4524.t1.exon11;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . CDS 36470 36921 . + 2 ID=cds.g4524.t1;Parent=g4524.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 36922 37202 . + . ID=g4524.t1.utr3p1;Parent=g4524.t1 #PROT g4524.t1 g4524 MASLSSPGVSDTEDALPLPFVFEIAWEVANKVGGIYTVIRSKAPVTAKALGDRYCLIGPYNAHHARTEVEVMEPSSQTMADCLNAMRANGVNVVFGRWLIDGHPKVILFDVKSCGDRLNRWKKDLYDQAFIATPEHDDETNNSVLFGFLVCWFLGEFYHRSSGVYMVAHFHEWLAAVGLILVRTRRLSIATVFTTHATLLGRYLCAGNVDFYNNLANFNCDKEAGDRGIYHRYTLERAAAHSAHVFTTVSQITADEAQYLLGRRPDLILPNGLNVVQFSAIHEFQNLHAMHKDKIHNFVRGHFYGHYDFDLDKTLYFFIAGRYEYSNKGADLYIEALARLNERLKAIGSDVTVVAFIIMPAPTNNFNVDALKGQAVTKQLKDTVNDIQQHIATRMFEAAARGNLPDTRAILNDDEIVRLKRCILAMQRQSLPPIVTHNMVDDASDPVLNHLRRVRLYNNVHDRVKVIFHPEFLSSTNPLFPIDYDDFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSVTSNLAGFGGFIHEHIVDPASYGLFVVDRRFKSVEESIQQLAQYMYDFALLSRRNRINLRNRTERCSELLDWKHLVLYYTRARELALARTYPHMYSVDADDHSSRPLFTMPRAGSAPSSPKPASAPVDDDVEDSIEAINL* # PASA_UPDATE: g4522.t1, single gene model update, valid-1, status:[pasa:asmbl_2963,status:12],[pasa:asmbl_2964,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 21844 28224 . + . ID=g4522;Name=g4522.t1 NODE_18_length_65365_cov_40.3356 . mRNA 21844 28224 . + . ID=g4522.t1;Parent=g4522;Name=g4522.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 21844 21922 . + . ID=g4522.t1.utr5p1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 22045 22085 . + . ID=g4522.t1.utr5p2;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 21844 21922 . + . ID=g4522.t1.exon1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 22045 22162 . + . ID=g4522.t1.exon2;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 22086 22162 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 22451 22601 . + . ID=g4522.t1.exon3;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 22451 22601 . + 1 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 22832 23041 . + . ID=g4522.t1.exon4;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 22832 23041 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 23248 23325 . + . ID=g4522.t1.exon5;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 23248 23325 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 23566 23692 . + . ID=g4522.t1.exon6;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 23566 23692 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 24000 24080 . + . ID=g4522.t1.exon7;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 24000 24080 . + 2 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 24283 24389 . + . ID=g4522.t1.exon8;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 24283 24389 . + 2 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 24586 24708 . + . ID=g4522.t1.exon9;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 24586 24708 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 24861 24971 . + . ID=g4522.t1.exon10;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 24861 24971 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 25397 25566 . + . ID=g4522.t1.exon11;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 25397 25566 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 25692 25812 . + . ID=g4522.t1.exon12;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 25692 25812 . + 1 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 26103 26208 . + . ID=g4522.t1.exon13;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 26103 26208 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 26558 26698 . + . ID=g4522.t1.exon14;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 26558 26698 . + 2 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 26989 27026 . + . ID=g4522.t1.exon15;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 26989 27026 . + 2 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 27192 27257 . + . ID=g4522.t1.exon16;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 27192 27257 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 27422 27527 . + . ID=g4522.t1.exon17;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 27422 27527 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 27706 27788 . + . ID=g4522.t1.exon18;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 27706 27788 . + 2 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . exon 28027 28224 . + . ID=g4522.t1.exon19;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . CDS 28027 28134 . + 0 ID=cds.g4522.t1;Parent=g4522.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 28135 28224 . + . ID=g4522.t1.utr3p1;Parent=g4522.t1 #PROT g4522.t1 g4522 MTSVWTADADGEVKLRTAETGPLAETPVTIHDVFQRSLERAPEREAMKVKRNGVWQSWTYQQYYDDCRTAGKAMIKLGLQPYHGVGILGFNSPEWFIADIGSIFALGFAAGIYTTNNPEACAFVAADCQANIIVVEDDKQLQKILQVRSELPHLRAIVQYNGTPAKADDVYSWDQFMEIGRQQSDDEINKRIAQLKPNKCCTLIYTSGTTGNPKGVMISHDNVTWTAHRVASMAKLQDDEHVVSYLPLSHIAAQMLDIHTPLTYAATVWFAQPDALKGTLVETLKEARPTVFLGVPRVWEKIAEKMQSVGRSVTGVKKSIATWAKGVGLRGNYALQQGGSVPWGWTAANWIVFFNIRKALGLDRCRMQLTGAAPIAKETHEYFLSINIPLYELYGMSESCGPQTVSLPDAYRTGSVGKTFIGAETKIDNPAADGTGEILFRGRHIFMGYLRQAVKTEEALDKDGWLHSGDVGRLDSDGFLFITGRIKGMMKDTLTLRAVGVNAGAKIMLVGSTVNDIISVTVPQAGAGPASSAAAAAPTEVPLCEQTEHKKVLDKGKPDDVMPGRRGTKESLPQTALVGIHNKAGQKVRLTFKLEMDQLWLSTKERTEKLPLTSIGKVVSEPIKGEEDYHIVALQLGPTEKSRYWLYWVPAQYVDAIKLAVLGNWQI* # PASA_UPDATE: g4526.t1, single gene model update, valid-1, status:[pasa:asmbl_2959,status:12],[pasa:asmbl_2966,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 39967 41506 . + . ID=g4526;Name=g4526.t1 NODE_18_length_65365_cov_40.3356 . mRNA 39967 41506 . + . ID=g4526.t1;Parent=g4526;Name=g4526.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 39967 40018 . + . ID=g4526.t1.utr5p1;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . exon 39967 40023 . + . ID=g4526.t1.exon1;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . CDS 40019 40023 . + 0 ID=cds.g4526.t1;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . exon 40431 40506 . + . ID=g4526.t1.exon2;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . CDS 40431 40506 . + 1 ID=cds.g4526.t1;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . exon 40815 41506 . + . ID=g4526.t1.exon3;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . CDS 40815 41210 . + 0 ID=cds.g4526.t1;Parent=g4526.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 41211 41506 . + . ID=g4526.t1.utr3p1;Parent=g4526.t1 #PROT g4526.t1 g4526 MKLELCNFSGYKIYPGHGRRYIRVDGRTFNFLNGKAEASFLMKRNPRKICWTVLYRRKHKKGAAEEVTKKRTRRTAKFQRAIQGTTMEDILAKRNQKPEVRKAQREQAERAAKEKAKAKQAAKKTTADKKPVAAQKTAAKAPKVQNKTTAAPRVGGKR* # PASA_UPDATE: g4534.t1, single gene model update, valid-1, status:[pasa:asmbl_2962,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 60947 64671 . - . ID=g4534;Name=g4534.t1 NODE_18_length_65365_cov_40.3356 . mRNA 60947 64671 . - . ID=g4534.t1;Parent=g4534;Name=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 64362 64671 . - . ID=g4534.t1.exon1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 64362 64671 . - 0 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 63867 64141 . - . ID=g4534.t1.exon2;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 63867 64141 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 63572 63746 . - . ID=g4534.t1.exon3;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 63572 63746 . - 0 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 63171 63257 . - . ID=g4534.t1.exon4;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 63171 63257 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 62883 62969 . - . ID=g4534.t1.exon5;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 62883 62969 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 62642 62791 . - . ID=g4534.t1.exon6;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 62642 62791 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 62352 62449 . - . ID=g4534.t1.exon7;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 62352 62449 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 62143 62191 . - . ID=g4534.t1.exon8;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 62143 62191 . - 0 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 61903 62016 . - . ID=g4534.t1.exon9;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 61903 62016 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . exon 60947 61427 . - . ID=g4534.t1.exon10;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . CDS 61129 61427 . - 2 ID=cds.g4534.t1;Parent=g4534.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 60947 61128 . - . ID=g4534.t1.utr3p1;Parent=g4534.t1 #PROT g4534.t1 g4534 MSSALTVDVVSGVAEEVTVGPTAHVTLALAPTDPGAEWVLLACHAQAVLLGANASYPGGGGDSVTARSSGFLAFALTGQALTASIDAPATTTAFAFGTSGTALDPIPGACCTTCARDFDPTVTVIYKNAIATVSFGSANVGYASGASPPTCKLDRRLVYELYEYILPDNSLSQSALFGALAKMSTAAGMRSHGKKVHSFVGTDIKRADVPSMVGRGIVYNILVKDTERGTQSAYAGGFTYSCDLDNGNSCDHLGNATTLALAIVAGGVGLLLVFFGHCLFRFQMYVSGVAVFSIAMYLVAGNTALSSDSFAVRVAVSGIVGLVGGIVPFLLWHFVVLAVGLLFEGFCMGFLFMCFLFSSPMGELRLWENPVNFGMTFSAGLALPAFFMVAYPRLTSIAFGAMCGSYAFIGALDYSVHSAFTNVVSAVIDRATIREYGVIYSGIQYQKNEYLMLAGWLVLLVGGALVQHYVTARHTRIPVRPTAPLRIRDTLREGVGRMRGRHEGAYYMSDEDENRPLLAPTDTIDRHNEHDDFSQSINYYYGAHDEF* # ORIGINAL: g4515.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 2013 5848 . + . ID=g4515;Name=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 2013 5848 . + . ID=g4515.t1;Parent=g4515;Name=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 2013 2096 . + . ID=g4515.t1.exon1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 2013 2096 . + 0 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 2265 2347 . + . ID=g4515.t1.exon2;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 2265 2347 . + 0 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 2571 2783 . + . ID=g4515.t1.exon3;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 2571 2783 . + 1 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 2993 3134 . + . ID=g4515.t1.exon4;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 2993 3134 . + 1 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 3306 3530 . + . ID=g4515.t1.exon5;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 3306 3530 . + 0 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 3705 4606 . + . ID=g4515.t1.exon6;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 3705 4606 . + 0 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 4906 5105 . + . ID=g4515.t1.exon7;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 4906 5105 . + 1 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 5327 5454 . + . ID=g4515.t1.exon8;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 5327 5454 . + 2 ID=cds.g4515.t1;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 5783 5848 . + . ID=g4515.t1.exon9;Parent=g4515.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 5783 5848 . + 0 ID=cds.g4515.t1;Parent=g4515.t1 #PROT g4515.t1 g4515 MAGQMDFDAESLQKAYGALETIAAVHEKNGDIASAVQCLHAILQSNPPARLEARIRCDIGMLLARYTTDLSEARRHFERLAVLSKSTSGIEEHRFRAAMALCDIYMLQSNTDFAKAVLRGALSECASNPAWTSALHFKLAEVWAACGDHFQALDSLRLAAAAGKLLPNGAPQFSAVVLLSQAQLLLTHPSDGAAAGIVSDGSMLSFEGCLAEVERLFTAHESGDATWVGLRAFGFVLSATRLLEEGNNKEAANAIRSLQQSIKQLGSGKLKETPSIQQTDVLTKWTHPQILLTLTYFLSIIVAEANGDRQRAETYTERALITVSSQIDGILSGVSGNASDLWDVERNADKTAMCAEMLSQLSLHDLRHVRVMCAVRAGVLERQCLRMVQQSRLVEALSACRSARASVSLFPAVVMRQAPMIHLLVGIVLLASGAYTQAIESFRVAIELHNAIRKGVASSSSEGSSSNGDFVFLARLCLATSLNEIVSRALSASGIAGLPKEADAELRSTLSWMSEERSSGRWHSRVIRIAYDLMMADKLLDDRGALPEAKEALTRTLMDTVESHKILSTAALSCLARFFIESDQIANAEEMVGSISSVAAQIAAAGFQLAAATLQGDCNKRTGRTEGESNLIVQWSELSNTIAASAADAMGSAHLAAIKNGASDAIVDADTFSNALCLAP* # PASA_UPDATE: g4531.t1, single gene model update, valid-1, status:[pasa:asmbl_2957,status:3], valid-1 NODE_18_length_65365_cov_40.3356 . gene 53022 54888 . - . ID=g4531;Name=g4531.t1 NODE_18_length_65365_cov_40.3356 . mRNA 53022 54888 . - . ID=g4531.t1;Parent=g4531;Name=g4531.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 54818 54888 . - . ID=g4531.t1.utr5p1;Parent=g4531.t1 NODE_18_length_65365_cov_40.3356 . exon 54045 54888 . - . ID=g4531.t1.exon1;Parent=g4531.t1 NODE_18_length_65365_cov_40.3356 . CDS 54045 54817 . - 0 ID=cds.g4531.t1;Parent=g4531.t1 NODE_18_length_65365_cov_40.3356 . exon 53022 53904 . - . ID=g4531.t1.exon2;Parent=g4531.t1 NODE_18_length_65365_cov_40.3356 . CDS 53394 53904 . - 1 ID=cds.g4531.t1;Parent=g4531.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 53022 53393 . - . ID=g4531.t1.utr3p1;Parent=g4531.t1 #PROT g4531.t1 g4531 MASPDVTVSTPSDCFWELGSYKRVVKRVEDGATLCDDIAAIIRERAAIEKEYSKALQAWAKKNDKYLEKSPEFGTLKDAWRAMLTEAESIAEIHFAVSQRVVSEVEANINNWKSEKFHKSILHFKEVRKAEEGFEKAQKAWAKLKGKMDKARKSYHAAARAVEQQAKKVSEAEKNPEIGHDEVKKISDKLNKMKNEMADERSKYEDSLQKLEEERPKYIHEMTQEFEKWQDFEKQRIEYFKDQFHDYHKIVNLHANPGFQAAFARLLGSFDNVDSNSDLANFSKLYGADMDMQWPAFEEYSGMGGDDVSLGRSASNVRRRDSIISSSSAASAPQTFSAPPSHVSRSSAAAPALAATRVDSFDEWDESASGGQQVRALYDYDATDPDELSFREGEIIMQTQSVDENGWCRGTINGRSGLFPANYVEEC* # PASA_UPDATE: g4532.t1, single gene model update, valid-1, status:[pasa:asmbl_2961,status:12], valid-1 NODE_18_length_65365_cov_40.3356 . gene 55464 56393 . + . ID=g4532;Name=g4532.t1 NODE_18_length_65365_cov_40.3356 . mRNA 55464 56393 . + . ID=g4532.t1;Parent=g4532;Name=g4532.t1 NODE_18_length_65365_cov_40.3356 . exon 55464 55643 . + . ID=g4532.t1.exon1;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . CDS 55464 55643 . + 0 ID=cds.g4532.t1;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . exon 55849 55894 . + . ID=g4532.t1.exon2;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . CDS 55849 55894 . + 0 ID=cds.g4532.t1;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . exon 56044 56393 . + . ID=g4532.t1.exon3;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . CDS 56044 56150 . + 2 ID=cds.g4532.t1;Parent=g4532.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 56151 56393 . + . ID=g4532.t1.utr3p1;Parent=g4532.t1 #PROT g4532.t1 g4532 MGDGDGLQQQSVETWLTSKVGTVPRNSLGWFRAGVGFYNKKEYVRSIECFEKAIQLDPMNYNAYQIMARACIAVNRREDAIEALKHSVKLDNPSDWQLLVELTSQIKAKE* # PASA_UPDATE: g4523.t1, single gene model update, valid-1, status:[pasa:asmbl_2955,status:3], valid-1 NODE_18_length_65365_cov_40.3356 . gene 28400 30847 . - . ID=g4523;Name=g4523.t1 NODE_18_length_65365_cov_40.3356 . mRNA 28400 30847 . - . ID=g4523.t1;Parent=g4523;Name=g4523.t1 NODE_18_length_65365_cov_40.3356 . five_prime_UTR 30792 30847 . - . ID=g4523.t1.utr5p1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . exon 30666 30847 . - . ID=g4523.t1.exon1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . CDS 30666 30791 . - 0 ID=cds.g4523.t1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . exon 30133 30285 . - . ID=g4523.t1.exon2;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . CDS 30133 30285 . - 0 ID=cds.g4523.t1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . exon 29150 29900 . - . ID=g4523.t1.exon3;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . CDS 29150 29900 . - 0 ID=cds.g4523.t1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . exon 28916 28960 . - . ID=g4523.t1.exon4;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . CDS 28916 28960 . - 2 ID=cds.g4523.t1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . exon 28400 28751 . - . ID=g4523.t1.exon5;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . CDS 28675 28751 . - 2 ID=cds.g4523.t1;Parent=g4523.t1 NODE_18_length_65365_cov_40.3356 . three_prime_UTR 28400 28674 . - . ID=g4523.t1.utr3p1;Parent=g4523.t1 #PROT g4523.t1 g4523 MPVTAVSQPQTEGPASGAEGASAGNPYIEVVQKRLRALNKRMARIHNYEDILRKGEQKLQKDQEEAVAKKEVVEELVKELNAILKLLTAHESEENKSNKKQQRRKHIEERQAAASRAVAVSSLHAVLDHVTEHRDALLAGDSPVLSAADAAAIDAFRPLVSTRPAAGSHRATAVAAAAVHIQKYTEGSSDDAAPGVQYSRVAEIVAAVAASPTFAGQPKADSAAPTEAPAAAAVAETKVDAVAAPAPAPAPQQSAAAHAQPSVDESTQPGAQEVAPASEEAGEWHSSEKDKSRGGRGGRGGRGGRGGPRSGRGGPRGPGGAPREDGEGAPHNTSEGGDDRRRGGSRGGRGGRGRGGREGGNGQPRPPRDGARSAPHQTEQASA* # ORIGINAL: g4533.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 56494 60458 . - . ID=g4533;Name=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 56494 60458 . - . ID=g4533.t1;Parent=g4533;Name=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 60288 60458 . - . ID=g4533.t1.exon1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 60288 60458 . - 0 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 59890 60144 . - . ID=g4533.t1.exon2;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 59890 60144 . - 0 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 59682 59776 . - . ID=g4533.t1.exon3;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 59682 59776 . - 0 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 59412 59564 . - . ID=g4533.t1.exon4;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 59412 59564 . - 1 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 59080 59251 . - . ID=g4533.t1.exon5;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 59080 59251 . - 1 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 58782 58979 . - . ID=g4533.t1.exon6;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 58782 58979 . - 0 ID=cds.g4533.t1;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 56494 58593 . - . ID=g4533.t1.exon7;Parent=g4533.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 56494 58593 . - 0 ID=cds.g4533.t1;Parent=g4533.t1 #PROT g4533.t1 g4533 MNNHANDAGASVCDAPTAASLVRSGLSGVTLRPYQLAGVAWLASIGASGHGGILADEMGLGKTVQTIGLLAHIVHAARNASAGPARPSLVVVPLSLLANWDAEMARYAPALRRRSYVGDPDRRAQLQEARSAVLRTLPSRCFEIRSLVAASDLDVLITTYEMCTKDAEFMGDFRWACLVVDEGHRLKNAEALLYGVLSSLRVTCRFLLTGTPVQNNLGELYALLSFVAPSFFPAADARAFLAKHADIEHNRSGADTLHSLLEPFLLRRVKSDVAADLPPKEELVLYTSLTAVQRRVYRAVLTKDVEALAAGSKARLANMLVQLRKCVNHPYLFEGVEPEPFVEGEHLVEASGKLRLLDRLLSRLRAQGHKVLVFSQMARVLDILQDYATFRRIPYERLDGSVRGDERDAAVRSFQTSPPPGSAPAADAPWLFLLSTRAGGLGLNLTSADTVIFYDSDFNPQSDLQAAARAHRIGQDRPVKIIRLVARDSVDEVVLARAEKKLRLTRAVIARGRFAGADADDSGGGADMDTDELRVILRHGIERILSDTEGEKEGEDAHRDDAIDRLIGRSEDGRWVVDPARGGASGNNAIIDNAHDDADARAAEERERADAAAADALLAQERVRRGIDPNQANQPARGRRELSADELELRRQGARKRALEREEAEVRREEAKLRKRQKLWADSGYVSASVEDDDSSSGVDDDADGDAALLAAADAEDRAPLAHCVGDVTRACGTPDRPAIIGIPVDDTGSWGRGGLFRALSAVSQRPREHYELAGRMGDLALGDAHIADMDISGARVTLACLLVVQTRDARGRIQPIDAAAIDSAMHRLGSVARRLGATVHVPRIGHGDPAFSYYRCERLMRKHLSARGIPASVYFYRAGAAAGGARQSVDASALRPECISPAAATHVEPPSDCNDQRMGSSDDDDGDTGDDDSGGASGASGASGAIASSAQTTPHAPLAPISVCFYRVAAAEAQALARYVVAYGGKASGRIAQHTTHVVCGGDVASWDGAVHKFRADHAGILLVGVAWLRKCVARAELVDSSPYTL* # ORIGINAL: g4519.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 12246 14704 . + . ID=g4519;Name=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 12246 14704 . + . ID=g4519.t1;Parent=g4519;Name=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 12246 13036 . + . ID=g4519.t1.exon1;Parent=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 12246 13036 . + 0 ID=cds.g4519.t1;Parent=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 13512 13686 . + . ID=g4519.t1.exon2;Parent=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 13512 13686 . + 1 ID=cds.g4519.t1;Parent=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 14462 14704 . + . ID=g4519.t1.exon3;Parent=g4519.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 14462 14704 . + 0 ID=cds.g4519.t1;Parent=g4519.t1 #PROT g4519.t1 g4519 MFRWGHRLVAVGTAEAPIIRSILRPPHGHRHLRPVFVDASLRLQSQVGMCRPRCHSLRHLHVSAATLHGHGHGHGHDDYEDDAAGTAHSRQSHERGPASPHEHRHPREKEHTENAQNITIAGIVVNIGLTGAKGVLGVLSNSSALVADAAHSFSDLLSDFVTLWGVRLSRRPATKRFPFGYGRSESVAACVVSLMLMGTGVGMIDHCVRLLLSGELMGPTGMTNYAIATAVASIVLKEALYQRTAWLAKGMDSSALHANAWHHRTDALSSVVSLGALVGQKYGFAFIDPVGGVIVAWIILKAGYSIGKSSLRELLDMSTGTRVGPHHFVSVRMCVDGTTTASEFEGLCDRVRRDICAQLPSAREVVIELSTHARPGHHDHVRAGDVQSHVRRDRDDEGHNAA* # ORIGINAL: g4528.t1 original gene structure, not modified by PASA NODE_18_length_65365_cov_40.3356 AUGUSTUS gene 43815 45362 . + . ID=g4528;Name=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS mRNA 43815 45362 . + . ID=g4528.t1;Parent=g4528;Name=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 43815 43952 . + . ID=g4528.t1.exon1;Parent=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 43815 43952 . + 0 ID=cds.g4528.t1;Parent=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 44067 44848 . + . ID=g4528.t1.exon2;Parent=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 44067 44848 . + 0 ID=cds.g4528.t1;Parent=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS exon 45077 45362 . + . ID=g4528.t1.exon3;Parent=g4528.t1 NODE_18_length_65365_cov_40.3356 AUGUSTUS CDS 45077 45362 . + 1 ID=cds.g4528.t1;Parent=g4528.t1 #PROT g4528.t1 g4528 MSTTSTADDGLECINARLSTFGVAVAEGAPGMGRGLFALRSFAEGEVMLRTVPLVIVAMDEWQRNVCMMCMHFSWRKHLTTPCEGRCGDHYCSLSCRDAAKALHAPRCAALRAVTDEICRRKKFDEIAATSAYYRVLARVLTLFLCERLAARTNGATASHGNAVCTAGTPSHVLPHVPTYADCLALEANRASVGEDRIGLMKRVYRTVANVLSPSPSLPVIPVSDSSDPRAACSSLCPPSDTQRSAHAMGEGDKHGAVGKRKHARLAKTHTQPQSAVEKMALFPAGDFPEEDECVDLLCRESCNSFGYRDSDRELYAFALHPLGAFFNHSCEPNAVRKYEGTKIDFVASQRVDAGAEITIAYGDVTACLELRQSFLSDTFHFKCACARCVREATAAVAAPN* # PASA_UPDATE: g5251.t1, single gene model update, valid-1, status:[pasa:asmbl_238,status:12], valid-1 NODE_1064_length_14302_cov_59.2291 . gene 2550 6422 . - . ID=g5251;Name=g5251.t1 NODE_1064_length_14302_cov_59.2291 . mRNA 2550 6422 . - . ID=g5251.t1;Parent=g5251;Name=g5251.t1 NODE_1064_length_14302_cov_59.2291 . exon 2550 6422 . - . ID=g5251.t1.exon1;Parent=g5251.t1 NODE_1064_length_14302_cov_59.2291 . CDS 2550 6422 . - 0 ID=cds.g5251.t1;Parent=g5251.t1 #PROT g5251.t1 g5251 MTGNNHFDGEDTFVRLFLFINDLLEKERPSTFALTLHGGIGRDGERRHSQSRYLARNTETSEYRERRNEGQTRWVYQYLLALIRLVLAENYNIPTSDLDLRQLHVELTTTTDENGGAFVYNNKDKQADIKLPTYFTTGKYKNSIYWIMNDDDRCGQRSAVILLAKTPSERQNLNKFARIDYQNRKVDEFCTKTGLYGRMKLADWDIVSKVYNVNVSIFFFVDASGAKLFREAYRVDNGCPSSIHLLYDAQMQHYHAVTDPDAVFALDNHGNSLFCQHCRKAFGRKVFDTHNCSAGTKCFSCSHSFATKFELHDQHLKGTPTYCPDCNRTFPSAECFEFHKCVKTKCDICNKMIELSHIEEHICGEEFCTNCKSYHMDKDNHSCPMRKKVHKEKAERRLIAWDTETFLGENGDHVVELVVAYEQSEEFTIRSTYELVKNEYKALNKETRPSLAKYVTNRFIERASGKALHIFEAKTGTESMEKFCEWAFQQHGASFVAHNAKGYDSVFLLHYIKYHTNYRPFTIRNGAKINYIKLQGEKSNKSIMFIDTLGHMGGSLASQVKQWGLDQEVIDTGLKMSDICHKGEWPYGFPALTNYDYEGVLPNEHFYTSKALDDDEFNKWYEAERKQVGETWNRRNELRAYCVADCVLLMEATLRYKNLYMDLENGLDPMLKPTICSFLFDAYNKNHMAEGSIYVLPKEIHKIAQQSYLGGRTEPFAMTAEVDLQTSMETGVCLFYLDVTSEYPAAYFYSPLPVGRPHRETFTDPSAPSSIARAHELITEHAKQSEAKTFAHICVDITPPTDLHIPVLACREIGTDGNQKLLCSLETKTKTWINTPELFLALEKGYVITAVHDLVWYNAAVDTLFSSWIAKYLKLKMIGDGFKGTRDELIAHVASLKSLYKFDLYTETEIDAFEVAQGIINIPKNSGMRTIGKLSLNSIYGRFALKTSGFEKDDYIPPSEPAKWFNLLRQHFNNEITLSSDKVLPNGNLLASYKTTEDNAEVKTNLRSVNVSVAAAITSYARCILYKGLDRVKERAIYADTDSIIFIADPTKDNLEDMISDKLGNWKPQTLGNGAVALAPKSYSFKPFTYEQALEIITKHYPTISTSLLDPAEFKKVLLKAKGLCLKKDKENDNNVSYETMKQYAQNTVADIQMKQLVNNCDLLKTMTEQNHQIRDQVKSEIITHVFGSAPTAISQVELLDKISHIPRVQKAIDKFSTTESRAINQPYTVSLNKFVRKNGSIYTTSELKIFNAKFSKRVLAPLDHPFFKTLPAGVNNFVGSFPVGSEYVA* # PASA_UPDATE: g5255.t1, single gene model update, valid-1, status:[pasa:asmbl_4172,status:3], valid-1 NODE_2376_length_6506_cov_37.4777 . gene 3503 5383 . + . ID=g5255;Name=g5255.t1 NODE_2376_length_6506_cov_37.4777 . mRNA 3503 5383 . + . ID=g5255.t1;Parent=g5255;Name=g5255.t1 NODE_2376_length_6506_cov_37.4777 . five_prime_UTR 3503 3559 . + . ID=g5255.t1.utr5p1;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . exon 3503 3559 . + . ID=g5255.t1.exon1;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . exon 4047 4277 . + . ID=g5255.t1.exon2;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . CDS 4047 4277 . + 0 ID=cds.g5255.t1;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . exon 4575 4813 . + . ID=g5255.t1.exon3;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . CDS 4575 4813 . + 0 ID=cds.g5255.t1;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . exon 5150 5383 . + . ID=g5255.t1.exon4;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . CDS 5150 5267 . + 1 ID=cds.g5255.t1;Parent=g5255.t1 NODE_2376_length_6506_cov_37.4777 . three_prime_UTR 5268 5383 . + . ID=g5255.t1.utr3p1;Parent=g5255.t1 #PROT g5255.t1 g5255 MLTARKKIVKPAGVEPTELEDSVAQALFDLEVNSADLKAELRDLHITGAREVDVGANKKAVILFVPVPLLKSFHKVQTRLVRELEKKFSGKHVIVLAQRRILPKATRKDGGRQKQPRPRSRTLTTVHEAILEDMVFPTEIVGKRLRVKLDGSKLIKVHLDKKDQSNVEYKTETFAAVYKKLTGKDVVFEFPANSE* # PASA_UPDATE: g5256.t1, single gene model update, valid-1, status:[pasa:asmbl_4171,status:12], valid-1 NODE_2376_length_6506_cov_37.4777 . gene 5488 6419 . - . ID=g5256;Name=g5256.t1 NODE_2376_length_6506_cov_37.4777 . mRNA 5488 6419 . - . ID=g5256.t1;Parent=g5256;Name=g5256.t1 NODE_2376_length_6506_cov_37.4777 . five_prime_UTR 6298 6419 . - . ID=g5256.t1.utr5p1;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . five_prime_UTR 6020 6092 . - . ID=g5256.t1.utr5p2;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . exon 6298 6419 . - . ID=g5256.t1.exon1;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . exon 5935 6092 . - . ID=g5256.t1.exon2;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . CDS 5935 6019 . - 0 ID=cds.g5256.t1;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . exon 5488 5743 . - . ID=g5256.t1.exon3;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . CDS 5583 5743 . - 2 ID=cds.g5256.t1;Parent=g5256.t1 NODE_2376_length_6506_cov_37.4777 . three_prime_UTR 5488 5582 . - . ID=g5256.t1.utr3p1;Parent=g5256.t1 #PROT g5256.t1 g5256 MVQKRHDRMTERFTGYRRDRNDSYEAFSVGEASVTAAVFAPYSTLAIKGLDDDAEGEVVVIADFHGAVKVFVNKSKDPQIA* # ORIGINAL: g5254.t1 original gene structure, not modified by PASA NODE_2376_length_6506_cov_37.4777 AUGUSTUS gene 189 2953 . - . ID=g5254;Name=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS mRNA 189 2953 . - . ID=g5254.t1;Parent=g5254;Name=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS exon 2903 2953 . - . ID=g5254.t1.exon1;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS CDS 2903 2953 . - 0 ID=cds.g5254.t1;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS exon 2306 2671 . - . ID=g5254.t1.exon2;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS CDS 2306 2671 . - 0 ID=cds.g5254.t1;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS exon 1877 2068 . - . ID=g5254.t1.exon3;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS CDS 1877 2068 . - 0 ID=cds.g5254.t1;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS exon 884 1550 . - . ID=g5254.t1.exon4;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS CDS 884 1550 . - 0 ID=cds.g5254.t1;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS exon 189 580 . - . ID=g5254.t1.exon5;Parent=g5254.t1 NODE_2376_length_6506_cov_37.4777 AUGUSTUS CDS 189 580 . - 2 ID=cds.g5254.t1;Parent=g5254.t1 #PROT g5254.t1 g5254 MADEPVYESVDDLGIERPSDASASQRNSSADTIPALPYDFNRRNKDVAQATNMFNCGDRTYVPFRAEPPLYVRTQKTLLAAPSVPIRYDDVTGDYEVWQDMKAFVSLKGGRHKKWTKRQVVLTPKALEMAKEKAKDTYEYEGEIALSLVQTVTDWEKAAKQPKKKDFTFSCSLGTGEKVHIRVDTPEAKRKWMKQIRTACVLHAVMETQGPERLERFLEEGGNVNVAFGASARKAMPLIAMAIEKGMSREAAAILQRTTHTRSVVNAAFVETVGLGRIISHVLRSTETDPNVRGEDEEGRTLLHFACAQGDVGAAKTLIMNNRPTVLLNRLDSHGCTPLHLALLAGSMPVVVALVVGGADVGIRDGSYRCPMHIAAEKGMFDAVRLLESRGADISAPDGSGATPLHIALAKGFTDIAKFLVLQGSDVNALNGDNEQPLHLALRARPVMRDIAEWLLAAGAETSSIDRDGYTPFHLASEADLEELQYYMAGIDRSAGLNVVDRKSGCSPLFLAAEVMQIRLVFQFLDNGADPNIATSLGLTPLHAYLLNCADDGGV* # ORIGINAL: g5103.t1 original gene structure, not modified by PASA NODE_278_length_28403_cov_42.1374 AUGUSTUS gene 11506 15251 . - . ID=g5103;Name=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS mRNA 11506 15251 . - . ID=g5103.t1;Parent=g5103;Name=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 15235 15251 . - . ID=g5103.t1.exon1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 15235 15251 . - 0 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 14986 15081 . - . ID=g5103.t1.exon2;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 14986 15081 . - 1 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 14739 14814 . - . ID=g5103.t1.exon3;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 14739 14814 . - 1 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 14473 14514 . - . ID=g5103.t1.exon4;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 14473 14514 . - 0 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 14141 14243 . - . ID=g5103.t1.exon5;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 14141 14243 . - 0 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 13720 13800 . - . ID=g5103.t1.exon6;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 13720 13800 . - 2 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 12868 13447 . - . ID=g5103.t1.exon7;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 12868 13447 . - 2 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 12480 12603 . - . ID=g5103.t1.exon8;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 12480 12603 . - 1 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 12323 12360 . - . ID=g5103.t1.exon9;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 12323 12360 . - 0 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 11882 12035 . - . ID=g5103.t1.exon10;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 11882 12035 . - 1 ID=cds.g5103.t1;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 11506 11610 . - . ID=g5103.t1.exon11;Parent=g5103.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 11506 11610 . - 0 ID=cds.g5103.t1;Parent=g5103.t1 #PROT g5103.t1 g5103 MAGSALFADPRARKIVAFGSLVIVFCITELIIGAAANSLALMTDAIHTFGDVASLVIGLAAVTYGKRGSDDGYTYGWARAELVGGLMNGCFLFAICLFILLESIHRFIEEEEIRQPMWVIVVGSVGFLMNAIGLCFFHGYGYGHGHSHGGSSEGHGHGGGVSRAKKDRHHTKVFESEDEALLSLTDADADAEEEEATVGGLPIALGAPLGHASLHAHAHSHSHAHAQAHAHSHGAEAGHSDGHGNHGIHHGHHGRPSLPLPAQDIGHAHAHASSAHGHSHGGSKKGKADANMHAIFLHILGDFAGNLGVIASGVIQLVLKSHFKYYADPAVSVLIALFVLSTCLPLIRRCASVLLQKVPDVVSLTETKAAISRVPGVLDAHELHVWELVDGRNVCTVHVTHPASFEAAEVLQGVESALHTLGIHSVTVQTEATPVEERTACTGLVCDNAECAESRCCPITCHTEHNTDENM* # ORIGINAL: g5101.t1 original gene structure, not modified by PASA NODE_278_length_28403_cov_42.1374 AUGUSTUS gene 5393 8449 . - . ID=g5101;Name=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS mRNA 5393 8449 . - . ID=g5101.t1;Parent=g5101;Name=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 7099 8449 . - . ID=g5101.t1.exon1;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 7099 8449 . - 0 ID=cds.g5101.t1;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 6170 6822 . - . ID=g5101.t1.exon2;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 6170 6822 . - 2 ID=cds.g5101.t1;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 5828 5920 . - . ID=g5101.t1.exon3;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 5828 5920 . - 0 ID=cds.g5101.t1;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 5393 5536 . - . ID=g5101.t1.exon4;Parent=g5101.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 5393 5536 . - 0 ID=cds.g5101.t1;Parent=g5101.t1 #PROT g5101.t1 g5101 MAGDASTPSTAVGTPARPSPNADTDSAAAGRRASGRAIKRRRFDDELVESSITPVRPRSQSMHAAASLAGTPSNAGAPGTPGSAALAASIPANARPADLQQQSRPSVVVVSSGVGKRKTSIVIRTGIMSTLGTPQPIRAPPPSATSTPTRHAPREGQPGRKSHASNLLNQQLQQQQQQQQQQQQQQQQQQQQQQQLSIQQSGNSRMPSKASNPPPKAALVVSAATAADAQNGKTAASGVSAHVGGGDAALRRWLPADDLLLINSVRHVNDIQTVFRIARFSRRFSYQEVAERWYSLLYDPVIARHASASLRESNCGSLAGLSLLTVPFSEDEEKILKGLKTPDDASLSRALEEHRLAFHPSRTLPSLRRHWTRMAAVGGSAGSYSHSDSALTHLRGMDGSKMTSTESDGGVGLRGTSSSSLPTDVSLDEVEWQLEVDPHLMPRPDAELLKEIDRVERAERRRIRQLEAALIASSSALSSLCPHVTLESPNVATSAGRDGHVIDNAATTKTDGDGNAGELCAENKESPKKEVDVTETPKAAGGGTENPKMEEGECRAEAPVTAEGNGAECDRAHDQAEAAATRDGGASGAVGDESAFGADGAVALLKRRRDDDDVSGDGHVGDGGRPAKVSRATPSDAHARFGTFVGADAHALGVLRSATALYFMRAQKVTIGRSTSVGTSAVDVDLASEQFSFMVSRVQGEVKLRMDGRFRVRNLGRRAMEVNGRRLETNAKAWLPDNSLIEVTAP* # ORIGINAL: g5102.t1 original gene structure, not modified by PASA NODE_278_length_28403_cov_42.1374 AUGUSTUS gene 8952 11336 . + . ID=g5102;Name=g5102.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS mRNA 8952 11336 . + . ID=g5102.t1;Parent=g5102;Name=g5102.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 8952 11336 . + . ID=g5102.t1.exon1;Parent=g5102.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 8952 11336 . + 0 ID=cds.g5102.t1;Parent=g5102.t1 #PROT g5102.t1 g5102 MFGVCLFASVSIIFVYLATETWVWHKNLRIEQLFWTAVATFLSGSLFWTHDGPAASLGQQRPFISSIICLAFVLFVRRVYRRISSTIYLTRFESLAVAADVDDGVQILSSVDNPHLAELETILKTLDYSSHAVRFIQRGNVVTSQRALQKLLASVPADALNSLVVHTNMPRLLESAQEISVDILRLLVGKRLGDLGVSAKATILDALQKIGIPREQRERFVRDIILSVRGPQLLRLKSILDGRGSWHNLFKLVYIDVQNKSVRGEILTHMSAESLRETAASKVEEGGGAQDEDEGASRSAPDLKVLSDIDDTLYCSGGPPAGLDKRFPKKTVYPGVLALYRELDTAAAHASPQKCMGCNLVFLSARPHSYKGFSESASYRRFRRMVAENTLHAMPTLLSGDAGSAAALMKNFAPIGKKKHSNFVRYARLYPEKSFVFFGDSGQGDVLAGELMLGTHPRSVLAVMIHDLGNVPDNAKQPPTKPPRVHYFKTYVAAATILFGLDILPASSLRTVVMAAIAEFHRIHFKSPALRDKCLGDLARDCEGFNALVAAGSIDGPPADATAAPPIVEEILSRTMNAARFLRRKSYSVLESTAHLFPDPVLATRIARASALDGMIPGADGGDVTGESDTDWEQPSTSATNPKSPRRRLQRESSVGSTTGDSACDDSDGALDSMDDADDAGGYTLDTIQELPDNSTATTTLSVPASPSARAEKTASKESIAHGDTETKVQSRPLGRKKHTRTVSDGSALLKRAVIGRVLSMDGDVESDGHGAGDGSLSAHRHAKGAHTSYALSN* # PASA_UPDATE: g5104.t1, single gene model update, valid-1, status:[pasa:asmbl_5011,status:12], valid-1 NODE_278_length_28403_cov_42.1374 . gene 15717 19074 . + . ID=g5104;Name=g5104.t1 NODE_278_length_28403_cov_42.1374 . mRNA 15717 19074 . + . ID=g5104.t1;Parent=g5104;Name=g5104.t1 NODE_278_length_28403_cov_42.1374 . five_prime_UTR 15717 15804 . + . ID=g5104.t1.utr5p1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 15717 15850 . + . ID=g5104.t1.exon1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 15805 15850 . + 0 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 15969 15998 . + . ID=g5104.t1.exon2;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 15969 15998 . + 2 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 16205 16268 . + . ID=g5104.t1.exon3;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 16205 16268 . + 2 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 16493 16595 . + . ID=g5104.t1.exon4;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 16493 16595 . + 1 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 16851 16970 . + . ID=g5104.t1.exon5;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 16851 16970 . + 0 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 17476 17537 . + . ID=g5104.t1.exon6;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 17476 17537 . + 0 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 17693 17826 . + . ID=g5104.t1.exon7;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 17693 17826 . + 1 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 18126 18189 . + . ID=g5104.t1.exon8;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 18126 18189 . + 2 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 18348 18462 . + . ID=g5104.t1.exon9;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 18348 18462 . + 1 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 18607 18717 . + . ID=g5104.t1.exon10;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 18607 18717 . + 0 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . exon 18852 19074 . + . ID=g5104.t1.exon11;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . CDS 18852 18986 . + 0 ID=cds.g5104.t1;Parent=g5104.t1 NODE_278_length_28403_cov_42.1374 . three_prime_UTR 18987 19074 . + . ID=g5104.t1.utr3p1;Parent=g5104.t1 #PROT g5104.t1 g5104 MAGAAGSWCLIESDPGVFTELIRGIGVKDVQVEEIYSLDEATFKELDPIYGLIFLFKWRSKEKDERPVLDDYSDRVFFASQVINNACATQAILSILMNCPQIDIGEELRNFLSFTSDFPAELKGLAISNSDKIREVHNSFARTEAFISEEKYSSGDDDDLYHFIAYVHRGGHLYELDGLKKGPIDLGECNESTWLNAATPVIQERINRYSGKEIRFNLMAVIKDRSSIYNERLADIELQINNAKAAISGGDDVMNGAIADLQHQAHELRERLAGEKDKMERYRVENIRRRHNYIPFFMEMLKLLAKKGELLPLVEKAKAKAAAGTSE* # PASA_UPDATE: g5107.t1, single gene model update, valid-1, status:[pasa:asmbl_5014,status:3], valid-1 NODE_278_length_28403_cov_42.1374 . gene 26406 28018 . - . ID=g5107;Name=g5107.t1 NODE_278_length_28403_cov_42.1374 . mRNA 26406 28018 . - . ID=g5107.t1;Parent=g5107;Name=g5107.t1 NODE_278_length_28403_cov_42.1374 . five_prime_UTR 27574 28018 . - . ID=g5107.t1.utr5p1;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . exon 27496 28018 . - . ID=g5107.t1.exon1;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . CDS 27496 27573 . - 0 ID=cds.g5107.t1;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . exon 27138 27400 . - . ID=g5107.t1.exon2;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . CDS 27138 27400 . - 0 ID=cds.g5107.t1;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . exon 26406 26977 . - . ID=g5107.t1.exon3;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . CDS 26665 26977 . - 1 ID=cds.g5107.t1;Parent=g5107.t1 NODE_278_length_28403_cov_42.1374 . three_prime_UTR 26406 26664 . - . ID=g5107.t1.utr3p1;Parent=g5107.t1 #PROT g5107.t1 g5107 MGNCHPFGRKTRRDSEHSLEDEIVDVPPEREQERERERARERERERERERREPPSRSSLDSALGPPLFINPRDYVPDYMSEEDMILKAKRITMIQLLPTVKYTNKLGVPKRHRECIICCDDYMEGDLLLGLPCNHFAHHECLSDWLNRSFMCPMCMYELDLESIEKTHWPALNEHAWSGASSSSSLAMAKGKGAVSAEVLPVAVSRSHSQGIPLDSL* # ORIGINAL: g5106.t1 original gene structure, not modified by PASA NODE_278_length_28403_cov_42.1374 AUGUSTUS gene 21680 26280 . + . ID=g5106;Name=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS mRNA 21680 26280 . + . ID=g5106.t1;Parent=g5106;Name=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 21680 21898 . + . ID=g5106.t1.exon1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 21680 21898 . + 0 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 22097 22216 . + . ID=g5106.t1.exon2;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 22097 22216 . + 0 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 22443 23289 . + . ID=g5106.t1.exon3;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 22443 23289 . + 0 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 23531 23871 . + . ID=g5106.t1.exon4;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 23531 23871 . + 2 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 24026 24138 . + . ID=g5106.t1.exon5;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 24026 24138 . + 0 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 24354 24463 . + . ID=g5106.t1.exon6;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 24354 24463 . + 1 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 24732 24926 . + . ID=g5106.t1.exon7;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 24732 24926 . + 2 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 25201 25359 . + . ID=g5106.t1.exon8;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 25201 25359 . + 2 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 25503 25757 . + . ID=g5106.t1.exon9;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 25503 25757 . + 2 ID=cds.g5106.t1;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS exon 26018 26280 . + . ID=g5106.t1.exon10;Parent=g5106.t1 NODE_278_length_28403_cov_42.1374 AUGUSTUS CDS 26018 26280 . + 2 ID=cds.g5106.t1;Parent=g5106.t1 #PROT g5106.t1 g5106 MSEGLDAVIDEQVGGRNPELVLALRLRDAAVVRHIPTNSRLHTLQFTSLLRLSLSGLGLESLEGFPNFPQLGKLDLDRNAIAGDLTHLCHLKALRILTLNHNPIEQIESFTTLHELSHLEILEALNTPASHLPAFRTTVLTAIPSILLLNGVEGEADEDEEDGVDFARRGGRALMVAQSDEEEEDDDDIDDDEEDDDDSDSEWFGQLAARTLLERSGGDRDAAIAVAVNLINGGREPAIDPNRHVYLADGERPSQPAPAAPPSPPPLSPSSFGLGSNPLLVQADLLRPSNALTDPYHPDFNVQRAISHMFSQWSMGGAPNAALLAGSRANGPNGPNGASDARRVADADADADADADEAMWDDVDSDDSDDSNDSDGDSSGRHSVALAPYVARLIARAGPDGIGSDVASDDDSSMYDEDLGDEDDEEDEEDFDVANRTVFGEVDPTETMLRRLSELSEMRTYFKGTARRFVLNTSANHYQCCRALAVPTPLDLYTMSKNHISRIDLVRKTCKTVVVSDFNPLCVTCKYGYIAMGGDNRELALYKVSGEFVMSVFAGGSMNNSVDIYRHNDGLRLIVANNDRHVRVFSLPSLSVVSCTAIYPCALNDAVISPDGLHFVTVGDVLAGFLGKINSDGTFAQGFEVLPFRGRRDALRTGRAFPSGSCQYVAWNCDSTLIAASTDSDNFVVVWDVGTRTVRACVDACGGTYAIAFSPMRPSLLAFTERRGVAHLCDIPASASSHNDIAGGASSQGDAAPSKPTAHRRQIIRVGGQQMVNGLAFSPDGSELHIATSRAISTYTMNEVPTLYMLTVRVVREQVLDGKINWNDCAFPQSVAEDIFPPGREPRKKKAASGASTGGVSASASASVVDASAAAHE* # PASA_UPDATE: g5105.t1, single gene model update, valid-1, status:[pasa:asmbl_5013,status:3], valid-1 NODE_278_length_28403_cov_42.1374 . gene 19296 20752 . - . ID=g5105;Name=g5105.t1 NODE_278_length_28403_cov_42.1374 . mRNA 19296 20752 . - . ID=g5105.t1;Parent=g5105;Name=g5105.t1 NODE_278_length_28403_cov_42.1374 . five_prime_UTR 20701 20752 . - . ID=g5105.t1.utr5p1;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . exon 20698 20752 . - . ID=g5105.t1.exon1;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . CDS 20698 20700 . - 0 ID=cds.g5105.t1;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . exon 19927 20247 . - . ID=g5105.t1.exon2;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . CDS 19927 20247 . - 0 ID=cds.g5105.t1;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . exon 19296 19660 . - . ID=g5105.t1.exon3;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . CDS 19547 19660 . - 0 ID=cds.g5105.t1;Parent=g5105.t1 NODE_278_length_28403_cov_42.1374 . three_prime_UTR 19296 19546 . - . ID=g5105.t1.utr3p1;Parent=g5105.t1 #PROT g5105.t1 g5105 MADADKKKSRTFRKFSYRGVDLDQLLDLGSEQLIDLVHSRARRRFSRGLKRKPMALIKRLRKSRKECGPQEKPAVVKTHLRDMIIVPEMIGSVVGVYNGKVFNQVEVKPEMVGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK* # PASA_UPDATE: g5100.t1, single gene model update, valid-1, status:[pasa:asmbl_5008,status:12],[pasa:asmbl_5010,status:12], valid-1 NODE_278_length_28403_cov_42.1374 . gene 682 4619 . + . ID=g5100;Name=g5100.t1 NODE_278_length_28403_cov_42.1374 . mRNA 682 4619 . + . ID=g5100.t1;Parent=g5100;Name=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 682 870 . + . ID=g5100.t1.exon1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 682 870 . + 0 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 1057 1168 . + . ID=g5100.t1.exon2;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 1057 1168 . + 0 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 1468 1710 . + . ID=g5100.t1.exon3;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 1468 1710 . + 2 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 2174 2285 . + . ID=g5100.t1.exon4;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 2174 2285 . + 2 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 2483 2815 . + . ID=g5100.t1.exon5;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 2483 2815 . + 1 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 3038 3488 . + . ID=g5100.t1.exon6;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 3038 3488 . + 1 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . exon 3689 4619 . + . ID=g5100.t1.exon7;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . CDS 3689 4495 . + 0 ID=cds.g5100.t1;Parent=g5100.t1 NODE_278_length_28403_cov_42.1374 . three_prime_UTR 4496 4619 . + . ID=g5100.t1.utr3p1;Parent=g5100.t1 #PROT g5100.t1 g5100 MGVLQGAQLFVLIVVPSLLVSWIAAVVLEESRGINRLHPNNVDAHADTVIIDGKDEKLFWFVQVSDIHLSKFREPERGTDLRRFIERTLPVVDPAFVIVTGDLTDAKDEALVDSIQFEDEWRSYEIILRETGIIGRTPSMRHGEMRVGGIASDDSAMGGARVEGMGSAAASTYWMDIRGNHDAFDVPAHHGDHDFFARLSASRQHGYHFTFDTSYGSYRFVAMDATPAPGPRRPFNFFGVATASEVDRLDAAVGPFGAHNHTIVFGHYPLSTVVSARGSSGLTAAQVVSRTTAYVCGHLHTLLGIAPTLYVTHLAGFMELELGDWKENRRYRVIAVDHDLVSFVDAAHGDWPVILLTNPKDSRFAIPRREPTNRIARSTHVRALVFSPHPIVSVTATVDGKLLDGPFERSCGAASGGECALFVHTWDPSSLAAGKHVMRVEAVDAAGNRKVLKQPFSVDGSRPWRFGMGEIILLPDYGLLLKCGFCLVYAAVVGGLLVVPWVARRRLVARQALARWSESQMALIVDLPQSPPSVRGGESASIAGTVLPVDTDVGLVAWAVRSCKTLAAATAFRFVELAGVPSVHRPLLAYSLYLLVGPWFIGELVRGDPFGCFFATGVWVQGTFIPVAETFNFAAQHIVFALAPVALHLSSRVGTATIVSTHGASAAGEFRHRGSWSRRAYGISVILFVLFHINACLDVWRWYGFLAFAVSPGKTWFLPLVYYLTAQAEAHYEAKRRGTAPHARPPRG* # ORIGINAL: g3848.t1 original gene structure, not modified by PASA NODE_10702_length_301_cov_38.7788 AUGUSTUS gene 114 282 . - . ID=g3848;Name=g3848.t1 NODE_10702_length_301_cov_38.7788 AUGUSTUS mRNA 114 282 . - . ID=g3848.t1;Parent=g3848;Name=g3848.t1 NODE_10702_length_301_cov_38.7788 AUGUSTUS exon 114 282 . - . ID=g3848.t1.exon1;Parent=g3848.t1 NODE_10702_length_301_cov_38.7788 AUGUSTUS CDS 114 282 . - 0 ID=cds.g3848.t1;Parent=g3848.t1 #PROT g3848.t1 g3848 MVAQDSFGEHVVKVADFGLSKDLGEKNYFRKNRREKLPVKWMAPETMIYGTFTSAA # PASA_UPDATE: g1002.t1, single gene model update, valid-1, status:[pasa:asmbl_563,status:12],[pasa:asmbl_566,status:12], valid-1 NODE_114_length_38656_cov_42.1694 . gene 1854 17111 . + . ID=g1002;Name=g1002.t1 NODE_114_length_38656_cov_42.1694 . mRNA 1854 17111 . + . ID=g1002.t1;Parent=g1002;Name=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 1854 1865 . + . ID=g1002.t1.exon1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 1854 1865 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 2033 2219 . + . ID=g1002.t1.exon2;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 2033 2219 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 2339 2524 . + . ID=g1002.t1.exon3;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 2339 2524 . + 2 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 2717 2887 . + . ID=g1002.t1.exon4;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 2717 2887 . + 2 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 3115 3215 . + . ID=g1002.t1.exon5;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 3115 3215 . + 2 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 3324 3566 . + . ID=g1002.t1.exon6;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 3324 3566 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 3747 4169 . + . ID=g1002.t1.exon7;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 3747 4169 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 4447 5492 . + . ID=g1002.t1.exon8;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 4447 5492 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 5696 6122 . + . ID=g1002.t1.exon9;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 5696 6122 . + 1 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 6303 7178 . + . ID=g1002.t1.exon10;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 6303 7178 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 7409 11624 . + . ID=g1002.t1.exon11;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 7409 11624 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 11863 13351 . + . ID=g1002.t1.exon12;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 11863 13351 . + 2 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 13504 14296 . + . ID=g1002.t1.exon13;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 13504 14296 . + 1 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 14426 16237 . + . ID=g1002.t1.exon14;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 14426 16237 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 16369 16495 . + . ID=g1002.t1.exon15;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 16369 16495 . + 0 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . exon 16618 17111 . + . ID=g1002.t1.exon16;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . CDS 16618 16931 . + 2 ID=cds.g1002.t1;Parent=g1002.t1 NODE_114_length_38656_cov_42.1694 . three_prime_UTR 16932 17111 . + . ID=g1002.t1.utr3p1;Parent=g1002.t1 #PROT g1002.t1 g1002 MATQETLPAIPQRKSPDDFTRHHRINSSKPLKSGGPSVDAKKLLSRLYSSNTHITPTITNDSVKSKGIPMASNKRKVTFPQQLPPLQRGEGEPIPRSSFRSPPPLPPSLSSTPRTLSASQQRELFRLIENFEKHSEIYEFSYLAPIRGVRFNPYRMRIVSHAEVDPENYFTISNNGVTHYYYGEIDITPLNVWVKEYEAFHKLLKIPIFSQYRLWKPFSVWRKNVLQKKMAACREVLAKNVFLLNPVLQVTLMRVHDACRAFAGKRLYRVDKEATYTLKDFVRVQEDHMRQLRTEFAAFEAEVQLNVLDACKADVVAAGFELDADISELSYIQQAELRAKYARIANFIRLCDYLVFSAFRSLVLCSVADLSELVACEVPKVVVVEDVRHESPRAPLFHVQIELHTRQLRFNPGVGQFQWIMEKTFQSFLDFVGGIRNLVSLPMYDQFTRPRFVSSAGDDLSVDNGPQLGSSAFDDDYKYQGAVAKTRDSVATAFERSAHYAASFSESLSVYLENLSLDLDKLMHAQTNPGFFGELLARFKGQCGMMQAMSETQQVLFLRVDTKGLKELFVPSPQSCFAHVKNSMPDLIAVRTRNLLQDINANLRQVSSIPSTVEEFLEHIRFLDTLKGDMDSLANQCTELEGMFSLTLEYEITLNVEDYALFQTLQPTFVALKDAIAAADTIREERTGVFSEEVMRQVERLRLEALQTQQNLQNPTLSNRDSSVDSVLHFLGKVEKALVKFGERAGVLSGQQKELGLVASRHEELESLRRDFELKRTLWTSLSEWDATLSSWLETPFLKIDIESVSSELQRYRRVIHQSRAGLPGNNVVPLLESKVARFDDVFPIISDLRNPSLRSRHWDEMCAIIGQDFWREAEVKLSEVLSLSIARFRDPVARISSKASSEGALEAMLNRVDAMWKETEFAVKPYRPDLKDMFILTNVDEIYEKLDDSLVTIGTIRGSKHIGPIRGQVEEWNRLLRVFSGTLDLLLTCQQLWMRLESLFGIADLQRQMPQEYRQFASADKSFKEIMWRTNNKPNAIRAGTAFGLQDTLQHSITALESAEKCVDEYLEARQSTFPRLFFLSRRQVVEAVGQSKNPASVQSIVGSVFAGIESLDITVQNKAYEFKGAVSAEGEILPFVKTVKPRSTADVWLNAVEDAMVSSLKRTLKQSLLEFDGKTQPEMIGSLPGQVIALHSQIAWTRHVGYAVESGAAPEKFVAMLDECEDRIDSLCDMVRDDPDHLRRKTAASLLTLAVYQRDVLGVLGHLPAPADAASFEWHATMRYYWESDENTAVVRVGDGSFKYGFEYLGACPRAAVTPLTQRCYLALSTAMQNNVGVASAGATGVGKTEMMRDMARSLGRFCAIFNCSAGMDAGTAFRLFAGAGQAGAFCILDDADRARSEVLSVIGQHIRSMKLAKDAGQTTFSLSGKDIRLEPASAVHLTMRSGAERRSKIPPNLRALMRPFEAVAPPQSLIGDVLLLCEGFDEPRRLARQLETLHTMLSERLSVNVAQYDWGLRAVKAIVTLAGQRRRAWMETTEDEIVASAANDVHAPRMSPEDAPALRAALGDAFPEARSLGSTSGSNALSSSLSATASSGARETFQMQQNYLHSEGDAKALRTAITAAITAGGLQPVTRMVDAAVRLRAALDSAQPVAIVGLPGCGKTATWQTLARAMNAMRERGDREQDRNLVSRKLHSPLDVTAPAPGSTGLGDKAGDEVPAESQTDAVWYVAVRPGVMTPSELFGERNASGNWVDGVFPAIFRQDAPEGTLERWIVVDGPVGAEWSEQLNTLLDDTRTLCLPSGERLRMPANMQVVLETVDLLSASPSTVTRCRVVCMERPADYWMPQAQSWIQRTAARLSDGEELVHDLQRLFATMIPSGLKYARENAEEPVPSQDLGIVESVCALVDALAVPQKDATLQGDDLRRLVHGAFAFAFVWGVGGGFSDGARVSFDRFARVTLDGLDCNFPPSGSVFDYHFNTRDSNFTKWADMLPSASNEPVPRSCDMLFTTPQTLCYETLINLYVEQGRPVYITGPPGTGKNQIAARYMQRRREKESFVTASIACHGRTTADQLRHYLESALVRRADGGLAPPPGRRMIMMLMDLNADACEEVDGNVRWGTQIEFLAQIASQGGFHAKWQPTFRKLSGVSFIATCGSTDSGRRPIPERLGRHVAMLCVPSPTQETFLWIANTALHGFLVPFADEVRAIRNQFASAIVALTQRISGDFPPTPTRSHYVFSLREAARVLIGLMQMRPLDVSTKMEAVRIFAHECARVFYDRLVDPIERRRFNAAFAEIQESFFGASADKITAAGDMLYGAVAGFNGSTVKSPVYAELDTKKLSEFLQEKLEEYNVKCQQPVRVTFFPEVTHAFVRIQRAIRQKRGSALLIGQRGSSRSSLVRFAAYLSNMAMVVVDASKWYGTEQLRDDIRKATRAAGSIGVDIVLLCAESVMHEPAFLDDINCLLGTGTIPGLFKASEREEIVTEVRQFAIESGCPDTPDCVTAHFYERAKDRIHVVMCCTPGPLLARRTREYPAIQSRCSPCWFDAWAEESLSAIASVALDGPTVKVDLGGPDVLKKVVSVCTRAYKCVGRLATRYKDETGRQYSITAAAYDDMLQLVVQLMEKRRATISTGLVRFGAAVERVSTLHQQLAKLHRDFGNVELQISQQKTDIDYYVTRLVDERKLHDDALTQISLDEAAVSDLDAEIESLARMADEEITAALPLLDAGIAGVLGLDDSALSDLRTMRRAPVNVQRVVEAVCVAFGTPADWQSGVRLLEDPEIVSKIAKFDREAVPDVVFRKLMTYTDSADYDPELVGKKSPAAQALCVWTRGLVAFLKVLKAVEPQRQKVAKMRVDLKERQTRTSDRREKLQQSTDDHAQLQRDYNDKVKASDTLKVKFDELSARRQQGGAVIAGFAGEYSRWMETVHLLKKEESTLIGDTVVAAAWIAYAGALTQEYRRILVAEVRSLCDQEGLACSMDVTVPTLVADPNDVASWRMSGLGSTETAAENATLVTRSLRWPLLIDPQSEGSKWLSKIESANGLRTLKCSDAGFLRALETAVRLGQPVLIMDIPESGVDPTIMPLLKRQVYKQQGRLLVRWGETSVDYDPNFRLYACVRGGNPTLTPEYWQAFSVVSFRESPEWLEDSMLSTVFSHFANEEEETLSDLEIETARLHTELDKVVSLVLEKLCSGAGSAIEDEALMTALSDAQRDADAVRTQMQAAKEQKETMAAHREKYRPLAACGAQMYLAADDFLRLNPLLQYSVPDFLGLFALALRKTAPHMHDDAFVDVDALLKVVPAQLFQHVSRALPEDEARVFAILYCGRTLRARGVVSDTDWRVLLSTHRPAGVCPARPDVDWLTPEAWESAIGLGQAVPGYERLCADLSARVRVWQAFGESKIPHKDGLPDPWANELSDIQKLIVIKTLRPDMAVPAILDWIERSIGDGFAPRTFDRFRSIFQETSASTPLLLVLVEGADPAEELIAFAAEQGKASRMHVLALGEGMYETAETLIDKAAKTGDWVFLQNCHLAGDWLGRLEEIVAGLSAADINPTHHEFRLILSSEPTQVNVGLLQQCVKITSQPATGVRARLSRALVNFEKPPAAIAGNNESVTAWRRLTFSIAMMHVVLTERVRFGVGSSISRGLAFSDKDLLMLGIVVNAAASRPMPLASQLRFIRHAFSEVIYGGRLADQRDRMLLAQFAESFLCEGALSAGHSFTQSGAYCVPEGSTYADYTKYADSLGATTDIEIFRVDKAEAIASNARAGRKLLKMALALQPWHVIGTRGSNTEKIVLERAHAVLAALPSHVETENVAEMALQKDTKGKPTIVSQFVIREAVRYNALVARIKAGCDAVVRAATGGSILTSQLERLFDALARDAAPSDWQFGFVPTHTSLPMYLEDLTKRASFVRDWLAKGPPATVWLPAFCSPRAFLATILQAHAARAGAAVETLSFTHKVEKNPLKALTDGSVAIGGLYIEGADFDEGSQRLVDTHIAHGSQAQLLPAIRFTPTADPGARGSSYSCPLYAMSASCVDKDRSSSDERLSSTICDVWLPSEQGPTYWIPRGVALVCRPADHVQPRSQSNLSALPSRAASRTESRRGSFSDRDAPPGTSTPGGNINAISETLSAEPEAPSMSQRRASLRPS* # ORIGINAL: g1003.t1 original gene structure, not modified by PASA NODE_114_length_38656_cov_42.1694 AUGUSTUS gene 17618 23263 . + . ID=g1003;Name=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS mRNA 17618 23263 . + . ID=g1003.t1;Parent=g1003;Name=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 17618 17971 . + . ID=g1003.t1.exon1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 17618 17971 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 18084 18171 . + . ID=g1003.t1.exon2;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 18084 18171 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 18409 18671 . + . ID=g1003.t1.exon3;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 18409 18671 . + 2 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 18941 19056 . + . ID=g1003.t1.exon4;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 18941 19056 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 19341 19620 . + . ID=g1003.t1.exon5;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 19341 19620 . + 1 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 19881 20380 . + . ID=g1003.t1.exon6;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 19881 20380 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 20621 20944 . + . ID=g1003.t1.exon7;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 20621 20944 . + 1 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 21134 21689 . + . ID=g1003.t1.exon8;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 21134 21689 . + 1 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 21885 21962 . + . ID=g1003.t1.exon9;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 21885 21962 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 22180 22216 . + . ID=g1003.t1.exon10;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 22180 22216 . + 0 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 22557 22676 . + . ID=g1003.t1.exon11;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 22557 22676 . + 2 ID=cds.g1003.t1;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 22830 23263 . + . ID=g1003.t1.exon12;Parent=g1003.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 22830 23263 . + 2 ID=cds.g1003.t1;Parent=g1003.t1 #PROT g1003.t1 g1003 MAGADGLSCDYVDIMDSLPSIIPESFAEGVNVSSVPAMDFSHHVDTLDHTMGSSSGEHLSPTPADASGWSDVAYEPPSKRRRLSVDAMDTGAVDEPTGGVGIGGGGDDVTDDKPVSFKITKPPNAAAKWMCLGPGQPRLFIQRRAGAEASVSSGKSKPMRLPSDAQEILSTRKGVARPCADFLSRFVGLSEATHVIRLKRKRNEQDSMPNSRKHFFQHIRDTFVANYHANVRKDSRFRFGSLLLDRLTDAKVSLIINLYRDGFSLGLDDAIVHKYDGAARDFFNAIDAQVIPVELSDIIDALPSRHFCNGCLVVEIRDSRFTVSPSSLAAGRSSLQPAGAAGDTVRPAVRRVMLRSTQSSMLGDLMQLAGDAEANNMMLTDDDWVRLERKLLLQTRAPICLDPSTLVACVANVQMYGARKIAAALRGHYRRSWLPASLSSQLGRRSRFALVNYLARSKKSVVALGDPSVSASASASASGEVKRDAPTAPSAGSPAVPAADPAAQTPVAVDAKTQEGGATKERPGFRNSFDPLERVRAIAAEARMDLPKSLPKFPARRAQPAPSPQQPIAVRVVRFESRPQSGQSVSSGQSGTPPVTGAAAQSPSATTTSCLLEVRQHQNGMYECLVRTWQGPDTGQNGELFLFYLGLREAATSYVAQFKRLYVAEGNVCVGDKDMTPGDSVRQQDEKQKQPTTTQAGAQQAGQAASQGHPPSAQSASVGAGGGKALGGGGAHVTSAQSPPAPHGSVQQRTIAAISAAQQQHLILQQQQQQQQQQQQQQQQASQGISSLGLGLSAPVQAAIQAGNANMAAAAAAAAAGGAGGLPDGVLGGRGQPASRGAMSAGQLRGPRPQGRGTAPLGRGQMRPPGPQGHSAQGMAAQMNAANQQQLAKNMQAQQQQQQQQSKMQGGGAGIVRPGSQALLGSQSQQIQQQLQLQMQQLQQQQQQQQQQLSSLVSTNSGGGAAPTPTASPGTLQQIQQLQSLMRSGQYTPQQQAALTARYNQLRLQLQQQQQRQAQAQGNSQGQTQQQQQQQQQQQQNHLAGMGRGSAPK* # ORIGINAL: g1004.t1 original gene structure, not modified by PASA NODE_114_length_38656_cov_42.1694 AUGUSTUS gene 24719 26947 . + . ID=g1004;Name=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS mRNA 24719 26947 . + . ID=g1004.t1;Parent=g1004;Name=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 24719 24851 . + . ID=g1004.t1.exon1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 24719 24851 . + 0 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 24957 25387 . + . ID=g1004.t1.exon2;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 24957 25387 . + 2 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 25584 25787 . + . ID=g1004.t1.exon3;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 25584 25787 . + 0 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 25991 26138 . + . ID=g1004.t1.exon4;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 25991 26138 . + 0 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 26255 26407 . + . ID=g1004.t1.exon5;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 26255 26407 . + 2 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 26538 26686 . + . ID=g1004.t1.exon6;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 26538 26686 . + 2 ID=cds.g1004.t1;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS exon 26831 26947 . + . ID=g1004.t1.exon7;Parent=g1004.t1 NODE_114_length_38656_cov_42.1694 AUGUSTUS CDS 26831 26947 . + 0 ID=cds.g1004.t1;Parent=g1004.t1 #PROT g1004.t1 g1004 MADNGTIPIDPVNPADNFIPGDIAWVLVSTAFVMMMTFGLAFFYGSLVREHQIADTLFKTIISMGVVTVQWVLFGYSFAFGTNNEFWGDFRWGGFIDLGDESVNDDGAREQYAPSVTGLTFAVFQMSFAVITPSLITGAVVGRMKFTSFIVFLFLWATLVYDPIAHWVWSIDGWLHKLGALDFAGGSVVHISSGFSALVAAFIVGKRPKMEREDPEPHLPFNLLGASMLWLGWLFFNGGSALSAGHVAALALTNTQICAGTSMVTWAIIDYAVTKKNNLEGALYGAVVGLVIITPGCGYVYPGMSCYTIIMGAFGAAISYLVLWSWKKCAHLRVCDDSLYVFCSHGIGGVIGAFMTGLFATTSVNSAGANGAFYGRPILIVYQLADIGATAAWSVGITALILYFLKFTLGLRSDSPTTTPETSATEMAPSKAVSRDFNTEVVPV* # PASA_UPDATE: g1001.t1, single gene model update, valid-1, status:[pasa:asmbl_562,status:12], valid-1 NODE_114_length_38656_cov_42.1694 . gene 232 1089 . + . ID=g1001;Name=g1001.t1 NODE_114_length_38656_cov_42.1694 . mRNA 232 1089 . + . ID=g1001.t1;Parent=g1001;Name=g1001.t1 NODE_114_length_38656_cov_42.1694 . exon 232 1089 . + . ID=g1001.t1.exon1;Parent=g1001.t1 NODE_114_length_38656_cov_42.1694 . CDS 232 969 . + 0 ID=cds.g1001.t1;Parent=g1001.t1;5_prime_partial=true NODE_114_length_38656_cov_42.1694 . three_prime_UTR 970 1089 . + . ID=g1001.t1.utr3p1;Parent=g1001.t1 #PROT g1001.t1 g1001 PSFAFLLEHFSGESVIVNGDDFEIVSVVSNEGLANSSEAQDIVVGKSAQAPPLERRTSRQWIFGSLAQTVRNAFGGASSPSISSSFDSSSIAANVQQFNYRTRPSLQYQLSDSNLLEYSMSSARLGQSAPSSDVAAPKGSVTHNYDNVHSSPRDELVGGDGDGDTDTIDEGGYGASFASALSTSDPVRMPPPRLRESLITSTVPLADGDSLDPSVNSADGWNRGKRRSAAWVNPLEAHRLLDSDA* # PASA_UPDATE: g1005.t1, single gene model update, valid-1, status:[pasa:asmbl_567,status:3], valid-1 NODE_114_length_38656_cov_42.1694 . gene 27422 31093 . + . ID=g1005;Name=g1005.t1 NODE_114_length_38656_cov_42.1694 . mRNA 27422 31093 . + . ID=g1005.t1;Parent=g1005;Name=g1005.t1 NODE_114_length_38656_cov_42.1694 . five_prime_UTR 27422 27732 . + . ID=g1005.t1.utr5p1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . exon 27422 27843 . + . ID=g1005.t1.exon1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . CDS 27733 27843 . + 0 ID=cds.g1005.t1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . exon 28021 29064 . + . ID=g1005.t1.exon2;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . CDS 28021 29064 . + 0 ID=cds.g1005.t1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . exon 29342 29523 . + . ID=g1005.t1.exon3;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . CDS 29342 29523 . + 0 ID=cds.g1005.t1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . exon 29679 29985 . + . ID=g1005.t1.exon4;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . CDS 29679 29985 . + 1 ID=cds.g1005.t1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . exon 30228 31093 . + . ID=g1005.t1.exon5;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . CDS 30228 30749 . + 0 ID=cds.g1005.t1;Parent=g1005.t1 NODE_114_length_38656_cov_42.1694 . three_prime_UTR 30750 31093 . + . ID=g1005.t1.utr3p1;Parent=g1005.t1 #PROT g1005.t1 g1005 MSGVAGERDFRIRVPLDPSFDDDASGKYRRQKFSVTRLWNKMTRLQRFIVTVFAGAILVIALIPETRSSALGVFSPLGLNRADDYLDGVGVANSSALLAEALATKERTIIALRKRVDALQKENEELEGIADVAADLAGKDASEEDDDAGLKERLDNLERENERLRARFGELGAAGAARDANGEDGDNVDVIIVNDSDRERAREADVAAAPAGDDEERPVDRVEHHGGSPDGDGDGSIADPPNGTDGEAGANGLALDDVGAGAEGGSGSKGSGDGGMPERREAVRNAMRWAWKGYKSFAWGHDELLPLSRTHSEWFHLGLTLIDSLDTLHIMKLDAEFEEAREWVRTSFTADRNVDVNLFETTIRVLGGLLSAYHLSKDKMFLDKAVDLGERLLPAFNTPSGVPFSDVNLHTHNAHGPQWSSDSSTAEVSTVQLEFRELSRLTGNQKFREVADKVIRVIGDQASGLVPIYINPSSGNLRSGTITLGARGDSYYEYLLKQWLQGGKSEDYLKQHYMDAMADVKSQLWRYSHPNKLAYVGELEGGQFKPKMDHLVCFLPGVLALGAWNGLDAAHLDMAKEMAETCYQMYKRMRTGLSPEIVYFNMGHGSFDDLEVHPADTHNLLRPETVESLFMLYRITGDNRYREYGWEIFQAFERYCRVPTGGYTTLQDVTRDPPPQRDKMESFFLGETLKYLYLLFEDESVIPLDEWVFNTEAHPLPLWKQ* # PASA_UPDATE: g1006.t1, single gene model update, valid-1, status:[pasa:asmbl_568,status:12],[pasa:asmbl_569,status:12], valid-1 NODE_114_length_38656_cov_42.1694 . gene 31407 38319 . - . ID=g1006;Name=g1006.t1 NODE_114_length_38656_cov_42.1694 . mRNA 31407 38319 . - . ID=g1006.t1;Parent=g1006;Name=g1006.t1 NODE_114_length_38656_cov_42.1694 . five_prime_UTR 38137 38319 . - . ID=g1006.t1.utr5p1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 38108 38319 . - . ID=g1006.t1.exon1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 38108 38136 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 37806 37937 . - . ID=g1006.t1.exon2;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 37806 37937 . - 1 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 37402 37550 . - . ID=g1006.t1.exon3;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 37402 37550 . - 1 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 36948 37003 . - . ID=g1006.t1.exon4;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 36948 37003 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 36571 36712 . - . ID=g1006.t1.exon5;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 36571 36712 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 35959 36183 . - . ID=g1006.t1.exon6;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 35959 36183 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 35616 35714 . - . ID=g1006.t1.exon7;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 35616 35714 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 35232 35410 . - . ID=g1006.t1.exon8;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 35232 35410 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 34725 34778 . - . ID=g1006.t1.exon9;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 34725 34778 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 34294 34503 . - . ID=g1006.t1.exon10;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 34294 34503 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 33686 33907 . - . ID=g1006.t1.exon11;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 33686 33907 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 33166 33360 . - . ID=g1006.t1.exon12;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 33166 33360 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 32838 32934 . - . ID=g1006.t1.exon13;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 32838 32934 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 32349 32447 . - . ID=g1006.t1.exon14;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 32349 32447 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 31960 32045 . - . ID=g1006.t1.exon15;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 31960 32045 . - 2 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . exon 31407 31750 . - . ID=g1006.t1.exon16;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . CDS 31508 31750 . - 0 ID=cds.g1006.t1;Parent=g1006.t1 NODE_114_length_38656_cov_42.1694 . three_prime_UTR 31407 31507 . - . ID=g1006.t1.utr3p1;Parent=g1006.t1 #PROT g1006.t1 g1006 MQEEARYLKRKVKGGHIDVHPVKQAIVVHYEVEATILADSGEAILGDKKQCQKLIRVKALSPQTNIPQLAEEIIGKCELIHPSKAPEVEQLLHYLLQRQSSMPAEKEEATMNLQPNYPGEEKPSEKANINDLDVYIEYLYEDMPEKIRGTSLVLQLTRLPDNLEEVVANETLIGALARVLKEDGKKNIELVTNIIYIFFCVSTFSVFHPIIAQHQIGSMTMRIIDNEVIRHTTWLTALEKLKAGVKETPTDKSLAKDFESESKRFRSMCRKQEQLLFVAFHLLLNLAEDVTVEVKMCNKGIIQLLVAVLDRGNLELRMLSVTFLKKLSIFSENNRQMALCGATEKLSRLVPHENDALLSVTLRLLHNLSFDAEVRSQMAKCGLVPKLVTLIANEVHRVTVLSILYHISMDDRFKSMFTYTDAIPMVMKMVLESAEERVAPELMALCINLAANARNSQLICDGSGLKLLIRRAIKTKDTLLMKMIRNISQHPGPTKMRFLDHIHDLVTLMKKTREDELLVEVLGILGNMNIAQFDFRKLLTDYDLVPFINERLLPGAADDDVVLEIVILVGTLASDDSCGETLAQSGVINNLIDLLNAKQEDDEMVLQIVYVFYQMIFNASTREVMLNQTQAVAYLIDLMHDKNSEIRKMCDATLDIIMERDNEWARKIRYEKFRWHNAQWLEIVEAQQAAQARAGSVASSSQSPPVGYRASGAGVGGYGNHRGSSDVDTDDAYDDHYN* # PASA_UPDATE: g14170.t1, single gene model update, valid-1, status:[pasa:asmbl_7311,status:3], valid-1 # PASA_UPDATE: g14170.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7312,status:3], valid-1 NODE_442_length_23699_cov_43.8154 . gene 18352 20671 . + . ID=g14170;Name=g14170.t1 NODE_442_length_23699_cov_43.8154 . mRNA 18352 20671 . + . ID=g14170.t1;Parent=g14170;Name=g14170.t1 NODE_442_length_23699_cov_43.8154 . five_prime_UTR 18352 18506 . + . ID=g14170.t1.utr5p1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 18352 18612 . + . ID=g14170.t1.exon1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 18507 18612 . + 0 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 18766 18861 . + . ID=g14170.t1.exon2;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 18766 18861 . + 2 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 19012 19173 . + . ID=g14170.t1.exon3;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 19012 19173 . + 2 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 19371 19564 . + . ID=g14170.t1.exon4;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 19371 19564 . + 2 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 19709 19873 . + . ID=g14170.t1.exon5;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 19709 19873 . + 0 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 19972 20173 . + . ID=g14170.t1.exon6;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 19972 20173 . + 0 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . exon 20335 20671 . + . ID=g14170.t1.exon7;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . CDS 20335 20486 . + 2 ID=cds.g14170.t1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . three_prime_UTR 20487 20671 . + . ID=g14170.t1.utr3p1;Parent=g14170.t1 NODE_442_length_23699_cov_43.8154 . mRNA 18352 20671 . + . ID=g14170.t1.1.5b6be70c;Parent=g14170;Name=g14170.t1 NODE_442_length_23699_cov_43.8154 . five_prime_UTR 18352 18861 . + . ID=g14170.t1.1.5b6be70c.utr5p1;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . five_prime_UTR 19012 19115 . + . ID=g14170.t1.1.5b6be70c.utr5p2;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 18352 18861 . + . ID=g14170.t1.1.5b6be70c.exon1;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 19012 19173 . + . ID=g14170.t1.1.5b6be70c.exon2;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . CDS 19116 19173 . + 0 ID=cds.g14170.t1.1.5b6be70c;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 19371 19564 . + . ID=g14170.t1.1.5b6be70c.exon3;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . CDS 19371 19564 . + 2 ID=cds.g14170.t1.1.5b6be70c;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 19709 19873 . + . ID=g14170.t1.1.5b6be70c.exon4;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . CDS 19709 19873 . + 0 ID=cds.g14170.t1.1.5b6be70c;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 19972 20173 . + . ID=g14170.t1.1.5b6be70c.exon5;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . CDS 19972 20173 . + 0 ID=cds.g14170.t1.1.5b6be70c;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . exon 20335 20671 . + . ID=g14170.t1.1.5b6be70c.exon6;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . CDS 20335 20486 . + 2 ID=cds.g14170.t1.1.5b6be70c;Parent=g14170.t1.1.5b6be70c NODE_442_length_23699_cov_43.8154 . three_prime_UTR 20487 20671 . + . ID=g14170.t1.1.5b6be70c.utr3p1;Parent=g14170.t1.1.5b6be70c #PROT g14170.t1 g14170 MQPAVFHWGRDPLFAVHAQLFIRDVLGLEEATDVKDAFFYGTHPITRVEICGIVVRVDEYNERISFVVDDGTGTLPCIVWASAAATGAAQQPSRCALGDCVTMRGRLGTFREHRQLTVHAIRIERDPNAEALHWLSVLSLKRSTYDVPCVLLTGTAGGMAPAHVHDREGGGGTKRLTDDDAAPAAKRRAMGRGHPSVTDDPVCATIMSWLSERTAADRISFAYEELKCDEGVVDAVRQGSEQADAHVAGMASSFVLARALRRLVEHGIVFVADAQSDRYEAVSHQHNLGPSLLRAIRERSADGDDGASGVSLDDLVADLGRTPLGNVSREQLAQSLELLVRSSRIYEMGPSLYRSVVL* #PROT g14170.t1.1.5b6be70c g14170 MRGRLGTFREHRQLTVHAIRIERDPNAEALHWLSVLSLKRSTYDVPCVLLTGTAGGMAPAHVHDREGGGGTKRLTDDDAAPAAKRRAMGRGHPSVTDDPVCATIMSWLSERTAADRISFAYEELKCDEGVVDAVRQGSEQADAHVAGMASSFVLARALRRLVEHGIVFVADAQSDRYEAVSHQHNLGPSLLRAIRERSADGDDGASGVSLDDLVADLGRTPLGNVSREQLAQSLELLVRSSRIYEMGPSLYRSVVL* # PASA_UPDATE: g14169.t1, single gene model update, valid-1, status:[pasa:asmbl_7307,status:12],[pasa:asmbl_7308,status:12], valid-1 NODE_442_length_23699_cov_43.8154 . gene 3940 18202 . + . ID=g14169;Name=g14169.t1 NODE_442_length_23699_cov_43.8154 . mRNA 3940 18202 . + . ID=g14169.t1;Parent=g14169;Name=g14169.t1 NODE_442_length_23699_cov_43.8154 . exon 3940 4015 . + . ID=g14169.t1.exon1;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . CDS 3940 4015 . + 0 ID=cds.g14169.t1;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . exon 4123 4749 . + . ID=g14169.t1.exon2;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . CDS 4123 4749 . + 2 ID=cds.g14169.t1;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . exon 4836 5045 . + . ID=g14169.t1.exon3;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . CDS 4836 5045 . + 2 ID=cds.g14169.t1;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . exon 5166 18202 . + . ID=g14169.t1.exon4;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . CDS 5166 18172 . + 2 ID=cds.g14169.t1;Parent=g14169.t1 NODE_442_length_23699_cov_43.8154 . three_prime_UTR 18173 18202 . + . ID=g14169.t1.utr3p1;Parent=g14169.t1 #PROT g14169.t1 g14169 MTPRKQLGVAWVIAALVLSSSVSAVEISWVSPDRGSIAGGTKVTIFGSGFSRDIYAGGNVIMFGDVPCTNIWFYSTTTSIVCVTEPMNPPHVSTGPVPVTVLVDSTEESVCRGNCWFSFIESESPSVSRIDAAGATAGSLISVEGRIFSEDLSLVERIYVGDNFCDMRDPITGDYYPYSWLNWPYMSLQCRPAETNVGLYGVKTSIPSRGDSVTEPSALKVSSTLELYTFQIVPEITSFAPSHGSVEGGSVISVEGAGFGSDPAGVDVSVGGVPCTVDPDSMSDTALTCTIADRFSASAVKAFPGNRGAKMDLYFNIDGNDIASLRRAPSFPNSPDVSKILTGEVSGPFNEYDRYGTRIVGAFIPPVSDNYTFFVASDDNSELRIGSKLDGSDAKTVVVFNVWVNRFQWHNYAQQRSAVPIWLDAGVPYYLDVLCKEGYGLDTCAVAALAERSPYSAKETGNALQEVQVVSTVTTVSAEVHTISVVGAGNSNNTFVIEWDGVQTRPLQASSTAAEVTDALNDILATGCDITDGDDVYDLDDFEGGAGSSDDWTSRDGWDPAIVTTTAFCGRSSLYFPTGLGRNFEGGNGLEGAQKSSGYSTRWYPNLCMAYRVPPTTRANMLIFDVVNGWLSLPLTDIFSSTSFAYPRIGSWDTIDSPLETDGEWHYKCIDVNEMLDEAYPDDPDHVIAGIIMYPPGNDFGAIGGEFWIDEFSVSALPREVGQTTRPARPNGIDIERLSVARRTKPGVVSFDVTITPVGCPVGFPLMSALSAALNASVVRSVPASAPLGGNFTLSFRNRTTVPIPFDASADRVASAIFPLIGRATVTPSWRGCAGYDWTITFDSINGRQPLLAANASNLSGTEARVPVTEKQLGGLFFAPIQAEMMRTIHSTPQVTVARRLANNGSLTAVCNAANGCEFAFLEADVALVTAVSPAAGAVGTTITLTGSGFVSGMTVAVGGTACTNVIVASEASATCVLGHSTAGTNSIDIIVPVKGRGRSIATLIYNLTATSTSHSVSSIAGGLELDIVGDGFSPIASDNSVTVEGVGACIVTASTHTKLTCLTPVSSAGEVLNRDVVVAVRTLRAVASQLSFLASATREVSRVVPAVGSVGGGTMLTVFGTFHVGDVVRVTIGDVPCEVKHFGVVYVACVTGAGTRIGNQTVRAHIEGLGRSTTLANYEYALAVTNVSAISGSSLGGQRVVVSGSGFWGAFAEHQAKVFLAGAPCDVESATYSEIVCVSTRASHSYLVTNTGLNPEYGRGYAWEPDYLEVEEGDVVEWSWTSSAFTGTEHSVEQVADAFAFEYDGHGFRSERSGDGFYGVRFTRAGAYHYVSATYGDIGMRGLVVVRPAVPVDGRVTVSLGGVSASFNKTGYRRAMDTTPVVRSVEPSSGLPGTVVKIYGDRFGATATAVVAIGGVPCVSLAAISGGFACTVGEVGPGVHRVSAAFPDRGDAIVQIPGGEFSVRPLVTSISPMSGSRMGGHTITLAGHGFGASRAFVGRAECDIQSASATAIVCTTSAAGKDGYNATLDIDGAVVSVSFEDTGDEGTRAEGIVGQAAAFQDRVESAPIAAEDSEVLFGNLSSGYTFELWVRPSQNSSADVFTLVASVLGHDGGQGFAVFLAPGGRLEFWAGIGGDSRPRRDDEYASVRRMADGLDWNNADDLAALFGDDVQMFEDASGVDENQLVRRDGVDDMAFSSFATATPTGTATATATATAMLTSLLVSPTPTLLPFVLPGQWSVVEGPALPLDEWTHVVCKVTAGKQSLYVNGALVASTNVNPVHFGANSIDFGGSILDEVANFTGFIDEAAIYRGSLRDSVIRTHVRYALSEAQPAYLVGIVSAPGINDVGYVAPSYEVLSARVGNDVHTVAGSVVEVHLPSECSSDRCYYEPKEDLTPVVTSINPAHGNGPLDIVISGSGFSSVAHNNVVEFGGAVCSVSKATHTSITCSLPPTKTSARVPKVHVTERGFADASGAQPFHFELVVRFMSPEEGSIAGGTVLTLVGVGFSTVASENTVSVGSIPCVVVGSPTETFLQCETRAVPTSAALSNLVVVVAVGDAAVTVPTRFSYTLNSTPKINFVDPTSGRSGSLLSVFGTKFSATASENTVTIGGVLCTVQSATTDSIQCILGPNVAGPRSVVARVGNLGYSLGSASFTHGLFVDTVAPVESGFGGGRLLSIGGDGFDGRPGNASANVINVCNAVCTVVSADFASITCLLSQYPGASPPTTDAQCAVVARVNGRDASWSQKYLFKTAWTSLITQFYPRRGGTAGGTLLTIVGYNFNAGSSVSIAGTPCEIASINSTVITCVTGAHTTSRTAPIRVNVEPWGDAFAVNANFDYIDVWSSCATWGRQCNKPVDGDIVYVKKGQTLLLDIATPVLEALVVEGALLFDRADGVALDAKYVLINNGRLEIGTEAEPFLQRATITMHGNIQDTELPVYGNKVLACRNCTIDIHGRPISVTWTVLAQTAFAGDSSITVRDPVNDWKPGDRIVIASTSSNPAEAEVVTIKSIGNGNKTIAIEETLSNVHVGDSVEIGGRTVNVRAEVGLLTRNIVFQGDIDPATPLGDTFGAQLFVHFHAAARLENFEVRHAGQAFRLGRYPLHFHLPGTAANSYIRGCSIHHTFNRAVTMHGVHQLRVENNVAYNIKGHTYFLEDGIESENIIRNNLGVYTQGSASLLNTDQMPATFWITNPRNHYTGNAAAGSTHAGYWFNLQDNPTGPSLTYSVCPNKSPLGTFMGNTAHSNVEFGLRVWESWVPRVNECGGGSHANADLRFFTAFSNGKGLEFSRVGHVRLLDSIITDNVNVGVEVTNAEGNWGGPMVANTLILGRSGILPGFPGTETGMRTPMSSKLTVENVTFANFDRATQVMLRGCSFCVPFKLFDGGMETRFRGIVKINVVRVASFQWEHEVLYRDLDGSLTGAKGWALPLNGLLDPAVCTSNIEFSAGFPGATCSGSVEFRRLAWNNVQPSSLDGRNAIIGNQFGNTSVPWRQKRITHPNGYMVTVPTLGTISISYDVAIKDRVDVTSYSMAAYLFGNNDYVFVGSSYFQKFDHYVISDVSDDLGRPVFANDTLGAYNFDNTTMMHKYIVSGRGKNSETIAFNFMADPCPKSGCPQPHGNDTNTPAGTRSWCDPSGWEAGVVPGDGDDAFIGSNQIVLLDCDTAHVNLLTIAGQLVFVDGADRELTATYIHVRGGRLTIGNATKPFKSHATISLTGNRKTPEMSINSRINLASKVLGVFGNVDMYGTVPNVTWTRLAATASVGATSITLDAAVTWKVGDQIVIGPTSYDGTDGETRIIASVTGGGRVVGLTVPLGRRHSGVTATYGGQSIVIAAEVGLLTRNIVIRGVDEPTGSLDTEEFGGRVLVGAYQFTAEMGAAVPTVLSGRARLSGVEFRNCGQRGWPSSTDPRHALAFKDISSLGGSFVRRCSFNYNYNSAIGVHTTEGLEISGNVAYRTVGSSYYTTSKSTILLNNLAVQTEIALVDAKDPGFDDESASFDVRVTLCTVRGNAASGSDRHGFRIKGETCGAVTADGLPSYYNNTAHSALFGFKLEGVSTCTQLAGFRAFRCWDFGVYASIESSISIMDFAIADSSVGIFLNVFGPSSVRHFALDKYVNATNGLMVGMSAESLCTDTAPVRKSMLSAAQDGVRTGIKMTSFTLDKIPGPPHGWDDIMSYPALYGSFYGDRITFARFQLDTCGRRNLAMATNPMSADATHPHYLKGVQWFDVEDESKLMYYEPDLKWINPTDCIDMDCDGLKHVVLTDVDGSFFGSVGGTIIPIAELRFDESRIPPAALKTAAGKAITPAEVAPNHGIYRDGLSCTLVDSWKAYKCAGGSHKLLIIESLDSDSETRRLSPLSLTTEGTMDLLNGPMDHGWCEHYTCLKRLSTFFAVVASQKSYTLFMTSTNPGRTRFHMPSASSSDGIVIATWYSNPQRLDVYRDGNYIEPENNVLVPGKNGEAGSVESRQGSQYIPPVTRSGGANYFERRSKLIYVVVRGRVVLDIVISPVVQVSMTLAVSVDNFYGPDLIKNLAFLLKTDPSRIKLVDVVAENAAAFRERTRRGDDAATISLQIGNPPSNTISMPTAPPPAGDDDTGAGSSNNSTDDPQAASDYQNQQNAVSDLNKIGETFVNLVQSNQLAAGLGVEVLGADISLAVAANPPPGGASGNSSDPSSGSSGGSIQVPAKMLLSSSATSVVANATFTGMLQVEVRDGSNALVNQLGILTPWNASVTIDTQANETASGATLSLSGSTVVFFANGRANFTNVVLVVAGSTQQQSIRLRITTGNGQFSVVTAEIPVSYVAQSNGGAAATSVTTVAAATTAQRTSTPAAGTQIAASATATATGGAIVPTAPASSGASASSASASSIGADAVVTPSPVAASDSSSSVSKAPIIGGVVGGTVLLLAACVGGYVWYNRSHQTWSPKRVDLRPEGFESSSVPGAVLPPTPPAPMASLAVNSVMSSSGGGVSFVPPTPLPPVGLGGAEAPISLPLPSNDPMNIKQPFDENAQRYARFVAKRNYVPKFPDEVALAVGDIVQVTDSTNASWYMGLNMTTHKWGRLPKHCVEPLASPAASPLPRPHNTPPSNSEDPFVVPELEAAPPSLLGDVVPHSVDEPRPRTPTRSPMITRAPEPEDRFSPSVCFRDC* # ORIGINAL: g14171.t1 original gene structure, not modified by PASA NODE_442_length_23699_cov_43.8154 AUGUSTUS gene 21436 23358 . + . ID=g14171;Name=g14171.t1 NODE_442_length_23699_cov_43.8154 AUGUSTUS mRNA 21436 23358 . + . ID=g14171.t1;Parent=g14171;Name=g14171.t1 NODE_442_length_23699_cov_43.8154 AUGUSTUS exon 21436 23358 . + . ID=g14171.t1.exon1;Parent=g14171.t1 NODE_442_length_23699_cov_43.8154 AUGUSTUS CDS 21436 23358 . + 0 ID=cds.g14171.t1;Parent=g14171.t1 #PROT g14171.t1 g14171 MASSLGLHGTGGTTGSDGNAGDRKATRVARDLSLEVSISLDNFEDPKVQNSKYVLTSPRSLEACARNGIKPVDLLSKPFAYFRDKYSHLGYSDDAIRKLCHDAEHRRLRRLLTAKRDRARMILDETGDGAKLERCEDALTDFEGSRSGYAFKPLESGSKTQRSASQSPPRSRSRSPLGAESGGRTSPQQSPALLSRPQSAGRVQRQRTASRDSLPSRPQSRTSDDGGERKHIPRRPASAEPTARPQSARRTHMRFGSGDYRIHETLSQLDIRDRMTGKPVVVPAVLSTEEVERLARLQEHWETELRKQHEESERARELQKELLRQQVLREHREQIETERRREEMQREWERKILLVDSLRDAERQKIALNSEFETLKRRAAAERIQRLEEEAEALRTRIAQEIEADSQRWRLRDERIRNEQSRVAEFNRTERAMYEERRRRLEVEEREARNVLDAAIRERDATISERAELQRAERLQSIRLSREREEEKVQRQKEAVSRMDAAMDEWTEAVQRRRAEAERWAEAVQKGLLSQRQTEVREALLEEERRHRERYQRVQEMEAQQLADQKNSIAFKDAFAAINASYRDKFNRQRKMYALEGQRIRESFREQKPRIVAEISGSGEAAVEAALSGGRTVQLPFVMN* # PASA_UPDATE: g14168.t1, single gene model update, valid-1, status:[pasa:asmbl_7310,status:12], valid-1 NODE_442_length_23699_cov_43.8154 . gene 2509 3383 . + . ID=g14168;Name=g14168.t1 NODE_442_length_23699_cov_43.8154 . mRNA 2509 3383 . + . ID=g14168.t1;Parent=g14168;Name=g14168.t1 NODE_442_length_23699_cov_43.8154 . five_prime_UTR 2509 2593 . + . ID=g14168.t1.utr5p1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . exon 2509 2715 . + . ID=g14168.t1.exon1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . CDS 2594 2715 . + 0 ID=cds.g14168.t1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . exon 2802 2954 . + . ID=g14168.t1.exon2;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . CDS 2802 2954 . + 1 ID=cds.g14168.t1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . exon 3042 3121 . + . ID=g14168.t1.exon3;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . CDS 3042 3121 . + 1 ID=cds.g14168.t1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . exon 3343 3383 . + . ID=g14168.t1.exon4;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . CDS 3343 3353 . + 2 ID=cds.g14168.t1;Parent=g14168.t1 NODE_442_length_23699_cov_43.8154 . three_prime_UTR 3354 3383 . + . ID=g14168.t1.utr3p1;Parent=g14168.t1 #PROT g14168.t1 g14168 MAAVDSGALDAIPPAVTFGKRMNATLNDDDVQKILYTQGHILRGFERANIKLDALNDMSAVHFQELAPKFRNYTTLLVNTKKDLDIVFRRIRVLKGKLAKQYPEIFAQFPDEYDEDDDGHN* # PASA_UPDATE: g14167.t1, single gene model update, valid-1, status:[pasa:asmbl_7309,status:12], valid-1 NODE_442_length_23699_cov_43.8154 . gene 526 2243 . - . ID=g14167;Name=g14167.t1 NODE_442_length_23699_cov_43.8154 . mRNA 526 2243 . - . ID=g14167.t1;Parent=g14167;Name=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 2237 2243 . - . ID=g14167.t1.exon1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 2237 2243 . - 0 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 2003 2161 . - . ID=g14167.t1.exon2;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 2003 2161 . - 2 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 1779 1928 . - . ID=g14167.t1.exon3;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 1779 1928 . - 2 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 1322 1639 . - . ID=g14167.t1.exon4;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 1322 1639 . - 2 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 872 1030 . - . ID=g14167.t1.exon5;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 872 1030 . - 2 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . exon 526 757 . - . ID=g14167.t1.exon6;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . CDS 558 757 . - 2 ID=cds.g14167.t1;Parent=g14167.t1 NODE_442_length_23699_cov_43.8154 . three_prime_UTR 526 557 . - . ID=g14167.t1.utr3p1;Parent=g14167.t1 #PROT g14167.t1 g14167 MADDEITWCRVATAEEGRPMARRYHSGVVHDGFLFVFGGAVANKTVSADLFSLQLATGHWQRIMPAGVSPPPRYGHSCVLVENVMYVFGGSNGETTLEDFWKFDFGTTTWNEIPKASSLVWPGPREHHTMVLGDGAFYLFGGARDRKTYYADLYRFSLASRQWERVVADSDGPCPRAGHLSFISEGKLYVYGGYCGDGGFDAIYDTFWLPIYERGSAWTSVETSGVLPRTSRQIASVSHWSGTYAFGGYDGKAPQGHLCRLKMPEMAWETVPVWLVLDNVGAAAVGSVGTFPTPRYGHCMYLNGDELIVFGGSGSMYLNDVIRFNLPERS* # PASA_UPDATE: g2892.t1, single gene model update, valid-1, status:[pasa:asmbl_7330,status:12], valid-1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . gene 79 1532 . + . ID=g2892;Name=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . mRNA 79 1532 . + . ID=g2892.t1;Parent=g2892;Name=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . five_prime_UTR 79 80 . + . ID=g2892.t1.utr5p1;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . exon 79 397 . + . ID=g2892.t1.exon1;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . CDS 81 397 . + 0 ID=cds.g2892.t1;Parent=g2892.t1;5_prime_partial=true NODE_4446_length_1607_cov_32.0953_potentialcontaminant . exon 797 848 . + . ID=g2892.t1.exon2;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . CDS 797 848 . + 1 ID=cds.g2892.t1;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . exon 1200 1268 . + . ID=g2892.t1.exon3;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . CDS 1200 1268 . + 0 ID=cds.g2892.t1;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . exon 1473 1532 . + . ID=g2892.t1.exon4;Parent=g2892.t1 NODE_4446_length_1607_cov_32.0953_potentialcontaminant . CDS 1473 1532 . + 0 ID=cds.g2892.t1;Parent=g2892.t1 #PROT g2892.t1 g2892 WRGAIVAVKTISSQELSLAEGSISSRLSSGKISEAKSKDTMPRESIGKAAAFRGNNKNVYRTICTKSIGGSNASTVGQTKGSKSSKSKATKTERRRVMEDIVEFKKEIKTMVQLRHPNIVIFMGACLHPNNLCIVTEFMARGSLLDLFDQPDVVFDWPLRLSFGE* # PASA_UPDATE: g2922.t1, single gene model update, valid-1, status:[pasa:asmbl_7878,status:12], valid-1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . gene 84 941 . - . ID=g2922;Name=g2922.t1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . mRNA 84 941 . - . ID=g2922.t1;Parent=g2922;Name=g2922.t1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . exon 843 941 . - . ID=g2922.t1.exon1;Parent=g2922.t1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . CDS 843 941 . - 0 ID=cds.g2922.t1;Parent=g2922.t1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . exon 84 762 . - . ID=g2922.t1.exon2;Parent=g2922.t1 NODE_5125_length_1009_cov_169.751_potentialcontaminant . CDS 84 762 . - 0 ID=cds.g2922.t1;Parent=g2922.t1;3_prime_partial=true #PROT g2922.t1 g2922 MISLLVPQLEGAIDGHAMLGTRNCTPNVMLNKTLLERSSLEIPLEDRDAAITEIKSWANELIPALLKAPSGERNNYPFALCGGMPGTGKTRLLDEVRNVVENFAVFREAFGESFEVAITFNSYSPFDLEERSRPAEHAICLRILNLFYAPTSPFPDFCKSYTSDMPNLKLPQVFESIFEAQCRAGVINQATKSMYVVLVDEFQCVFNDGDKEYFKNLFQALGALVANSGNRRYAVIVMFAGTRSLKFDVAARESTFPYR # PASA_UPDATE: g9084.t1, single gene model update, valid-1, status:[pasa:asmbl_1418,status:12], valid-1 NODE_1384_length_11654_cov_47.5114 . gene 8567 11554 . - . ID=g9084;Name=g9084.t1 NODE_1384_length_11654_cov_47.5114 . mRNA 8567 11554 . - . ID=g9084.t1;Parent=g9084;Name=g9084.t1 NODE_1384_length_11654_cov_47.5114 . five_prime_UTR 11491 11554 . - . ID=g9084.t1.utr5p1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 11403 11554 . - . ID=g9084.t1.exon1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 11403 11490 . - 0 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 11048 11221 . - . ID=g9084.t1.exon2;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 11048 11221 . - 2 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 10747 10857 . - . ID=g9084.t1.exon3;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 10747 10857 . - 2 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 10262 10443 . - . ID=g9084.t1.exon4;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 10262 10443 . - 2 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 9681 9818 . - . ID=g9084.t1.exon5;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 9681 9818 . - 0 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 9310 9507 . - . ID=g9084.t1.exon6;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 9310 9507 . - 0 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 8957 9052 . - . ID=g9084.t1.exon7;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 8957 9052 . - 0 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . exon 8567 8807 . - . ID=g9084.t1.exon8;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . CDS 8682 8807 . - 0 ID=cds.g9084.t1;Parent=g9084.t1 NODE_1384_length_11654_cov_47.5114 . three_prime_UTR 8567 8681 . - . ID=g9084.t1.utr3p1;Parent=g9084.t1 #PROT g9084.t1 g9084 MVQKFTAEFAHILTRPIGFEAVIRVRCTKGMNIHTYHGNFFVRSSDLLAVPNVSPDNAYAMQISVEEPLSASNTATFQAALLYTTSFGERRIRVHTLCAPITAQLADLYSSADQDVIANLASKMAVDRSLSTKLSDAREAMLNMVTDILSVYKSTFATSNQAASGLFVADSLRFLPLIINALLKHAAFRLGTTTGLDERAYAIHQFKVLPIPAAMTFVYPRMWAVHDLPPGYGVVDAEGKTVFPPALQLSSERLERHGVYLLDAHDVMYLWVGKVVQPHTCTALFDRPAFAAIQAGQVNIPPLESELSVRVRALITAACVDRPVKPLVMVVKEDDARLRSVFLAHLVEDRTEHVMSYIEFLTNLQRQISK* # ORIGINAL: g9083.t1 original gene structure, not modified by PASA NODE_1384_length_11654_cov_47.5114 AUGUSTUS gene 2884 7432 . - . ID=g9083;Name=g9083.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS mRNA 2884 7432 . - . ID=g9083.t1;Parent=g9083;Name=g9083.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS exon 3894 7432 . - . ID=g9083.t1.exon1;Parent=g9083.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS CDS 3894 7432 . - 0 ID=cds.g9083.t1;Parent=g9083.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS exon 2884 3670 . - . ID=g9083.t1.exon2;Parent=g9083.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS CDS 2884 3670 . - 1 ID=cds.g9083.t1;Parent=g9083.t1 #PROT g9083.t1 g9083 MLILSVTDGGSGFVAGSSVDAEFVYLPIVTGSQLGSVVDAVRFGVAKTAEIQRSAPPGSRVTVTVRLGGNGTAPASTPELVWSDGAFDVTETSVDLGVSSSVLIVDGTGLAVDCGTVTAGGAGVLRVRMGTLAITNLTVRACRGSAQAGTATAVQPCILSVDAPAAATWSLFHLESFVGVRFACVAGIFNASDGYLTHFTGMGGPSLVELTGAAVTAVARLSIAHVTAGTDRIYLGIIASLTDDSTLHMSDCDIEGISAGVAGAGGVMSVSGRSVVVLYNVAARSVAVRSGGLASIFDNAHFACNGCDLVNMSAVYSGGTFDIRGTAVVNLSNSAVTASMCGGTGGFAVMSDGPTLSMSNVTVTDAVAAGAGGVVSATSVFGSGGLFVSNCTFRRCVSGVIGGVVTIYGDSAFVAVLTHVTVVMVTAPYAPVIHIDGLTVLNLTSSTIVDVHAYIFGGVSIVFGAATLNMVDVSVTDTDAISGGGFIYATGNAMVTLDGCRVMRSSTDNNGGALYLTSSSHVYIHNSSFVSVVAAYDGGFAALDTFASLWLDNCDISNASAVLGGGFIAKGQGSIVASHISMRRIRSSGDGAVVYASESSTVRISGANIVDSAAGEEDVLGAASQSLTRGGSGHLGSLNVANGGAFSANVAAFVVLEDVSAVRTTASGAGGFIAALGKVTVSVSNSSTAGSLAFVGGGILAAFGATISISQMHISNTSAATDGGCMYFGRGSLVKINTTSVENCHAGLVRASFGAGGGAYIDDAVQLTITSPLRAHGVSAVLGSGVYSVASLGASTASRILVESGIAINASEIPADWSVGGLLSGSIERLVPSLSSISSRSGAALPPFTVGIRDIFGGSPSLPSSLSLAIRLYVQFDDTQTQSKFLGDTERNFATASSVLFSGLRLFAQPGNYILRAESANPFLYGSLDPSPLRRSIVSNFSFPIAVTDCDPLTEELIVFAVDGNANETAWQCRSLPVGAPAVTSNDYASLVKVVVPSVVLGISALACFATVVRWRLVVRRRENSRLAQAEFVQKQADMLVGLSALEIPRAQVEVLERIGEGEFGVVMKARVIMADGRPRLCAAKTLKEGASYEERVAFVGEAQILAGISHPNVISLCGCLTTEEPLFLLFEYAPHGDLRSFVMQVPVSRRSAPSTQAMLVNFAAQIARGMAFVSAIGIVHRDLAARNCLVSQDVFGEYVIKVADFGLSKEILQTSDYYRSKRSRKERLPYRWMSIDALETRRFSTKCDVWSFGIVVWEMFSFGAVPYGATVSAVNILSHLRAGNRLDCPAPCPADLFQALVDCWNGDSDQRPLFAELAERVAMIRVSASHTGSSQPLSNGRRHSLAAAAPSATVIGPSLPVHFGDRYSPSVTRAAVAQPTDSDVQRQGVAASISEPSKLAVNHVTETNYLEVVGGEREAEDLERMESIELHLYEAAVGEC* # ORIGINAL: g9082.t1 original gene structure, not modified by PASA NODE_1384_length_11654_cov_47.5114 AUGUSTUS gene 957 1594 . - . ID=g9082;Name=g9082.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS mRNA 957 1594 . - . ID=g9082.t1;Parent=g9082;Name=g9082.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS exon 1367 1594 . - . ID=g9082.t1.exon1;Parent=g9082.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS CDS 1367 1594 . - 0 ID=cds.g9082.t1;Parent=g9082.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS exon 957 1244 . - . ID=g9082.t1.exon2;Parent=g9082.t1 NODE_1384_length_11654_cov_47.5114 AUGUSTUS CDS 957 1244 . - 0 ID=cds.g9082.t1;Parent=g9082.t1 #PROT g9082.t1 g9082 MFATYKTRVLILPASGPRRMFSSPTFLTLAVGATVPQSLVCLGNIFTSAKDVSAAAICFESVPLANFLKIALSDFEDYRAWTNLRTYYARFDWTGMYASYFDLVGALPKPSLESLASWLSEQCGINNEFVGDLNKYLDIEANKWMRWYDPMASGSFGEIAKKWRLTSGLTT* # PASA_UPDATE: g6389.t1, single gene model update, valid-1, status:[pasa:asmbl_4981,status:12], valid-1 NODE_2775_length_5160_cov_69.5896 . gene 1399 4982 . - . ID=g6389;Name=g6389.t1 NODE_2775_length_5160_cov_69.5896 . mRNA 1399 4982 . - . ID=g6389.t1;Parent=g6389;Name=g6389.t1 NODE_2775_length_5160_cov_69.5896 . five_prime_UTR 4981 4982 . - . ID=g6389.t1.utr5p1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 4870 4982 . - . ID=g6389.t1.exon1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 4870 4980 . - 0 ID=cds.g6389.t1;Parent=g6389.t1;5_prime_partial=true NODE_2775_length_5160_cov_69.5896 . exon 4494 4579 . - . ID=g6389.t1.exon2;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 4494 4579 . - 0 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 3872 3944 . - . ID=g6389.t1.exon3;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 3872 3944 . - 1 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 3479 3570 . - . ID=g6389.t1.exon4;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 3479 3570 . - 0 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 2982 3120 . - . ID=g6389.t1.exon5;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 2982 3120 . - 1 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 2324 2486 . - . ID=g6389.t1.exon6;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 2324 2486 . - 0 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 2142 2213 . - . ID=g6389.t1.exon7;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 2142 2213 . - 2 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 1844 1947 . - . ID=g6389.t1.exon8;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 1844 1947 . - 2 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . exon 1399 1609 . - . ID=g6389.t1.exon9;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . CDS 1433 1609 . - 0 ID=cds.g6389.t1;Parent=g6389.t1 NODE_2775_length_5160_cov_69.5896 . three_prime_UTR 1399 1432 . - . ID=g6389.t1.utr3p1;Parent=g6389.t1 #PROT g6389.t1 g6389 ELGGDYQDKPVSTLADQQIVRILQLFKELKFDTPDGSCLSPAGEYNLRLGVMKELKPDMVATFQEPTRVFEGHPFIVEAAVSLGGKTVKPGLNVYRYANRIPLLFEAGGDVVTRTVLKKINWTVYKIKPNVDKLGVFVSLVSTKIPFKGTGKEYIGDDVEEIGAAVKHAIQQCCLQLKVKLMRQAALRDRQERKQNLTKYIPNVSKAVFEVLAKIAAAKDDDDRPQERMRYDQGLLRVSLFATDNPTVDIIPERELLRKVTIGEVTQNVLHKKLVEHVDQTDIEQAFEYVASNNAHQQQKLDDAHLLPLDEARHMREITHPTCVLSLFIGAELEYMED* # ORIGINAL: g12192.t1 original gene structure, not modified by PASA NODE_2075_length_7847_cov_62.0184 AUGUSTUS gene 5284 5936 . - . ID=g12192;Name=g12192.t1 NODE_2075_length_7847_cov_62.0184 AUGUSTUS mRNA 5284 5936 . - . ID=g12192.t1;Parent=g12192;Name=g12192.t1 NODE_2075_length_7847_cov_62.0184 AUGUSTUS exon 5546 5936 . - . ID=g12192.t1.exon1;Parent=g12192.t1 NODE_2075_length_7847_cov_62.0184 AUGUSTUS CDS 5546 5936 . - 0 ID=cds.g12192.t1;Parent=g12192.t1 NODE_2075_length_7847_cov_62.0184 AUGUSTUS exon 5284 5315 . - . ID=g12192.t1.exon2;Parent=g12192.t1 NODE_2075_length_7847_cov_62.0184 AUGUSTUS CDS 5284 5315 . - 2 ID=cds.g12192.t1;Parent=g12192.t1 #PROT g12192.t1 g12192 MALPVCPIQPPPPLCGQVDDIASSTNSYIRMCVKEEYDLTVDIKRGRELGFREILIAPGQSMLGTVRFLEQFMINAGTDVDRQNIVQFAKDVRYSFGGGPTDKDQLEWILRRSDTPNEIKHICIGIYKEQVDWRKTATCA* # PASA_UPDATE: g12191.t1, single gene model update, valid-1, status:[pasa:asmbl_3429,status:12], valid-1 NODE_2075_length_7847_cov_62.0184 . gene 2 5137 . + . ID=g12191;Name=g12191.t1 NODE_2075_length_7847_cov_62.0184 . mRNA 2 5137 . + . ID=g12191.t1;Parent=g12191;Name=g12191.t1 NODE_2075_length_7847_cov_62.0184 . five_prime_UTR 2 3 . + . ID=g12191.t1.utr5p1;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . exon 2 1932 . + . ID=g12191.t1.exon1;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . CDS 4 1932 . + 0 ID=cds.g12191.t1;Parent=g12191.t1;5_prime_partial=true NODE_2075_length_7847_cov_62.0184 . exon 2039 3417 . + . ID=g12191.t1.exon2;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . CDS 2039 3417 . + 0 ID=cds.g12191.t1;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . exon 3500 5137 . + . ID=g12191.t1.exon3;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . CDS 3500 5009 . + 1 ID=cds.g12191.t1;Parent=g12191.t1 NODE_2075_length_7847_cov_62.0184 . three_prime_UTR 5010 5137 . + . ID=g12191.t1.utr3p1;Parent=g12191.t1 #PROT g12191.t1 g12191 EQNSLFVIIEIIIDFLQVLSFTLADKFSWNESWIGWLSTATRISRFHWYLEIGPSVTQALFFIALATVMLVLLNAAYVGITFSRGKRLNLLLVKTLRSTAGIIATVLFLPLIDIFASRFTVCGVSHLKVDSGACGWQGAEVIIKIIAVIAIILLTTLSLAIESTFFDESPESKGILSRPHARIDVVFLLYKALISILDSVLNLDQAKPQWAFVAILTTGSFLFAYLYTWYPAYYRFGFAKLRATLMWCLAWASVALVCVQIANNESSNSGPILFYVGLPLAALAGALAISERRRHILGKDVFLISSPYEIELKVRFMLEPLVNKRRRATAGLDQNDKDAKTEEDIADSKLVAQAGDVYRKALMTIGNSSILLVFQSQYFYATAHNGVLGARALAKASRAAPFHLDEQFFVYRRQQMCQEYFSSNASESRDVIMYMTLMQSIQTVRQVEVKCMRAQAGFWNELLSSRPDSTRLRAISSIINENIALGQKSFRTLLRMSPDSPQVCRMYANWLGTVMYDQEKKVKYLNRAAVLESGVEDAEGQDGGAGALSMFRGAGRLDIDGMRDGSSAVLRLLCDEERLGTVETVNAAALRLFGCARHDLIGRDFTVVLPEPFARAYQSAAQAYVVQGSLDIRGSKSVFFKNKNGYLFPGRLTVKDIPGQGVLPSFVAIAEPVTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRVVRILTNEESGSQPPSHPTYDQVYPTFPKKGNNDSLCDSFEGARVRGVSPALPGNEPFGTYPRPGGGIASFVPMAPKMERASFVRFPGRSSMRGSVSLTLPEGTALESHEMKPLSKPSNSPEAIAIVLDEIEIPHVLPSADSTSDSDDGNGGSYMQPMPPLERIATCKVNAAYEDTTAGDNVNGYSSQTRQHEQPEDRGNDLHRKKRDDLEDGRSSASGRSNSSVKRVNTLRRLLVETNNKGLSPVLRTFRMVVLFSLATLIAMAIAQYVVEKKQVTSFKDSFDILKTVGDIRFNGISAGLNARFLSLANSGLKPASQIPLYSDNLFVASDGLDSGYKRMMDRVPKMSAHHRKLYQSLSVNFTIGFDLAALKSTVRESTLAEALKMSIAQIREILNTNITGLSVGSNLFLLPLLNGLDVSSLSKTMNASAEYTRTEVDDSIDEMGHESLAMSVAGLVVVVILSVFVVLPTIVYVERTSENTLRVFENVPRDTIRKMRSRCEKKVKELQEEDNSASDSEEDGGSDGERNGRRRAPKVDVAQRTMVFTRSWKYIATIALKISAVFVIGVVFFSLTYNFGFVSIEKNLREGAIRVEYATYIRTSVRSLLWSTYDTSSGLSQGSVLANIVKTARYEISEMNRGLEIGSSVFGIPPQTSMSNIHNNLLYDDACAVLDVVAADPSLLNECESVGTGIFRNGLSQAIVWYITRITELYVVAGPNFTVGPDSFKFFNRKDVVEMEKLERQFLQPALEQSVNEYISQIDDTIGKRNAAVLALLIAFIILSVVVYVAIFHRLIRSLDVEMKRTRSMMLMLPDDILGRMTWLDAYVTKLAGRRHL* # PASA_UPDATE: g12193.t1, single gene model update, valid-1, status:[pasa:asmbl_3431,status:12],[pasa:asmbl_3432,status:12], valid-1 NODE_2075_length_7847_cov_62.0184 . gene 7083 7757 . + . ID=g12193;Name=g12193.t1 NODE_2075_length_7847_cov_62.0184 . mRNA 7083 7757 . + . ID=g12193.t1;Parent=g12193;Name=g12193.t1 NODE_2075_length_7847_cov_62.0184 . five_prime_UTR 7083 7276 . + . ID=g12193.t1.utr5p1;Parent=g12193.t1 NODE_2075_length_7847_cov_62.0184 . exon 7083 7757 . + . ID=g12193.t1.exon1;Parent=g12193.t1 NODE_2075_length_7847_cov_62.0184 . CDS 7277 7723 . + 0 ID=cds.g12193.t1;Parent=g12193.t1 NODE_2075_length_7847_cov_62.0184 . three_prime_UTR 7724 7757 . + . ID=g12193.t1.utr3p1;Parent=g12193.t1 #PROT g12193.t1 g12193 MNLVSLVVLLRHTAHDLTVGTKAAFERVHSSQLVHIRTTLIFPSTMLEADSSLAMHEPWYGSRHLAQSRRWDVAKRLAVTFPNASLHDVHRSRRSLRATLVYFLNDRYNVFFDTLLEGDLTMGTNGSAVRKGDASCKGRDCDWLYDAG* # PASA_UPDATE: g12624.t1, single gene model update, valid-1, status:[pasa:asmbl_4258,status:12], valid-1 NODE_2413_length_6375_cov_40.9617 . gene 2339 3481 . - . ID=g12624;Name=g12624.t1 NODE_2413_length_6375_cov_40.9617 . mRNA 2339 3481 . - . ID=g12624.t1;Parent=g12624;Name=g12624.t1 NODE_2413_length_6375_cov_40.9617 . five_prime_UTR 3320 3481 . - . ID=g12624.t1.utr5p1;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . exon 3225 3481 . - . ID=g12624.t1.exon1;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . CDS 3225 3319 . - 0 ID=cds.g12624.t1;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . exon 2898 2992 . - . ID=g12624.t1.exon2;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . CDS 2898 2992 . - 1 ID=cds.g12624.t1;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . exon 2339 2657 . - . ID=g12624.t1.exon3;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . CDS 2611 2657 . - 2 ID=cds.g12624.t1;Parent=g12624.t1 NODE_2413_length_6375_cov_40.9617 . three_prime_UTR 2339 2610 . - . ID=g12624.t1.utr3p1;Parent=g12624.t1 #PROT g12624.t1 g12624 MIIPVRCFTCGKVIGDKWDKYLTLLSQEYEEAEALDTLGLRRYCCRRMVLTHVDLIEKLLRYNPIQRDPQFVPQNRDQ* # PASA_UPDATE: g12626.t1, single gene model update, valid-1, status:[pasa:asmbl_4259,status:12], valid-1 NODE_2413_length_6375_cov_40.9617 . gene 5646 6252 . - . ID=g12626;Name=g12626.t1 NODE_2413_length_6375_cov_40.9617 . mRNA 5646 6252 . - . ID=g12626.t1;Parent=g12626;Name=g12626.t1 NODE_2413_length_6375_cov_40.9617 . five_prime_UTR 6234 6252 . - . ID=g12626.t1.utr5p1;Parent=g12626.t1 NODE_2413_length_6375_cov_40.9617 . exon 6048 6252 . - . ID=g12626.t1.exon1;Parent=g12626.t1 NODE_2413_length_6375_cov_40.9617 . CDS 6048 6233 . - 0 ID=cds.g12626.t1;Parent=g12626.t1 NODE_2413_length_6375_cov_40.9617 . exon 5646 5850 . - . ID=g12626.t1.exon2;Parent=g12626.t1 NODE_2413_length_6375_cov_40.9617 . CDS 5737 5850 . - 0 ID=cds.g12626.t1;Parent=g12626.t1 NODE_2413_length_6375_cov_40.9617 . three_prime_UTR 5646 5736 . - . ID=g12626.t1.utr3p1;Parent=g12626.t1 #PROT g12626.t1 g12626 MADEEDFRRRLDAISQELAKPTQFRGRINEIASLLAVAVGSSQSSGAKYDVADPAALAQIQKYLSDQQRGIQQLIAVIKEDSDDASIIERGLEDAGYRA* # PASA_UPDATE: g12622.t1, single gene model update, valid-1, status:[pasa:asmbl_4257,status:12], valid-1 NODE_2413_length_6375_cov_40.9617 . gene 144 964 . - . ID=g12622;Name=g12622.t1 NODE_2413_length_6375_cov_40.9617 . mRNA 144 964 . - . ID=g12622.t1;Parent=g12622;Name=g12622.t1 NODE_2413_length_6375_cov_40.9617 . five_prime_UTR 823 964 . - . ID=g12622.t1.utr5p1;Parent=g12622.t1 NODE_2413_length_6375_cov_40.9617 . exon 575 964 . - . ID=g12622.t1.exon1;Parent=g12622.t1 NODE_2413_length_6375_cov_40.9617 . CDS 575 822 . - 0 ID=cds.g12622.t1;Parent=g12622.t1 NODE_2413_length_6375_cov_40.9617 . exon 144 402 . - . ID=g12622.t1.exon2;Parent=g12622.t1 NODE_2413_length_6375_cov_40.9617 . CDS 144 402 . - 1 ID=cds.g12622.t1;Parent=g12622.t1;3_prime_partial=true #PROT g12622.t1 g12622 MLVAVGRAVNGAAKNAAVARALLPRRFPVGSTACVLDARRHFTPLNQKPFDNLVRMQQSSCGKWPAKDLFGVKTATGDFKWTSYGEFAQQVDHFRGALSGLGVKPGDKVAVISNNRLEWAIGAYATYSLGAHYVPMYEAQLPKDWSFILADSGAVVALVANEKILEITT # ORIGINAL: g12623.t1 original gene structure, not modified by PASA NODE_2413_length_6375_cov_40.9617 AUGUSTUS gene 1400 1995 . + . ID=g12623;Name=g12623.t1 NODE_2413_length_6375_cov_40.9617 AUGUSTUS mRNA 1400 1995 . + . ID=g12623.t1;Parent=g12623;Name=g12623.t1 NODE_2413_length_6375_cov_40.9617 AUGUSTUS exon 1400 1467 . + . ID=g12623.t1.exon1;Parent=g12623.t1 NODE_2413_length_6375_cov_40.9617 AUGUSTUS CDS 1400 1467 . + 0 ID=cds.g12623.t1;Parent=g12623.t1 NODE_2413_length_6375_cov_40.9617 AUGUSTUS exon 1734 1995 . + . ID=g12623.t1.exon2;Parent=g12623.t1 NODE_2413_length_6375_cov_40.9617 AUGUSTUS CDS 1734 1995 . + 1 ID=cds.g12623.t1;Parent=g12623.t1 #PROT g12623.t1 g12623 MKRLRERFAREEQPEWAEICVYRDALGVDPRTNLEKLSMDPVLVLEPLPVKNKTIMERLRERNPKMDPAVDGAISAVLGDVAEDVTNAYKGVKREEARTPAQRASRVVF* # PASA_UPDATE: g12625.t1, single gene model update, valid-1, status:[pasa:asmbl_4260,status:3], valid-1 NODE_2413_length_6375_cov_40.9617 . gene 3924 5461 . + . ID=g12625;Name=g12625.t1 NODE_2413_length_6375_cov_40.9617 . mRNA 3924 5461 . + . ID=g12625.t1;Parent=g12625;Name=g12625.t1 NODE_2413_length_6375_cov_40.9617 . five_prime_UTR 3924 4010 . + . ID=g12625.t1.utr5p1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . exon 3924 4025 . + . ID=g12625.t1.exon1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . CDS 4011 4025 . + 0 ID=cds.g12625.t1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . exon 4247 4418 . + . ID=g12625.t1.exon2;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . CDS 4247 4418 . + 0 ID=cds.g12625.t1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . exon 4597 4698 . + . ID=g12625.t1.exon3;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . CDS 4597 4698 . + 2 ID=cds.g12625.t1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . exon 4848 4975 . + . ID=g12625.t1.exon4;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . CDS 4848 4975 . + 2 ID=cds.g12625.t1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . exon 5105 5461 . + . ID=g12625.t1.exon5;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . CDS 5105 5206 . + 0 ID=cds.g12625.t1;Parent=g12625.t1 NODE_2413_length_6375_cov_40.9617 . three_prime_UTR 5207 5461 . + . ID=g12625.t1.utr3p1;Parent=g12625.t1 #PROT g12625.t1 g12625 MAAAMAQRTKTKKKRAQRATSNVFAMFDQNQISEFKEAFNMIDQDHDGFISKEDLSDMLASFGRQPTEKEIDEMMNEAPGTINFTMFLTLFGEKLNGTDPEDVIRNAFGCFDQGGTGLVNVEQLRELLTTMGDRLTEDEFDDMLRGAPVDSKDNFNYVEFTRVLKHGTKDDE* # ORIGINAL: g2727.t1 original gene structure, not modified by PASA NODE_24053_length_78_cov_58.3333_potentialcontaminant AUGUSTUS gene 2 78 . + . ID=g2727;Name=g2727.t1 NODE_24053_length_78_cov_58.3333_potentialcontaminant AUGUSTUS mRNA 2 78 . + . ID=g2727.t1;Parent=g2727;Name=g2727.t1 NODE_24053_length_78_cov_58.3333_potentialcontaminant AUGUSTUS exon 2 78 . + . ID=g2727.t1.exon1;Parent=g2727.t1 NODE_24053_length_78_cov_58.3333_potentialcontaminant AUGUSTUS CDS 2 78 . + 0 ID=cds.g2727.t1;Parent=g2727.t1 #PROT g2727.t1 g2727 QQQQQQQQQQQQQQQQQQQQQQQQQ # ORIGINAL: g4854.t1 original gene structure, not modified by PASA NODE_4378_length_1706_cov_48.2045 AUGUSTUS gene 295 1342 . + . ID=g4854;Name=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS mRNA 295 1342 . + . ID=g4854.t1;Parent=g4854;Name=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS exon 295 365 . + . ID=g4854.t1.exon1;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS CDS 295 365 . + 1 ID=cds.g4854.t1;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS exon 637 785 . + . ID=g4854.t1.exon2;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS CDS 637 785 . + 2 ID=cds.g4854.t1;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS exon 976 1105 . + . ID=g4854.t1.exon3;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS CDS 976 1105 . + 0 ID=cds.g4854.t1;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS exon 1308 1342 . + . ID=g4854.t1.exon4;Parent=g4854.t1 NODE_4378_length_1706_cov_48.2045 AUGUSTUS CDS 1308 1342 . + 2 ID=cds.g4854.t1;Parent=g4854.t1 #PROT g4854.t1 g4854 NYRFSRALPHGTVFVANRQVKGRGRGGNKWISPEGCLMFSLLVRMPRHDDIVFIQYLVGLAVVDALTTESNCEDIGLCLKWPNDIYLRSSTDGSLCKVGGILVNSSFCDGDFQIVIESMGTAPKTLT* # PASA_UPDATE: g7039.t1, single gene model update, valid-1, status:[pasa:asmbl_5574,status:12], valid-1 NODE_3109_length_4280_cov_79.0723 . gene 46 1387 . - . ID=g7039;Name=g7039.t1 NODE_3109_length_4280_cov_79.0723 . mRNA 46 1387 . - . ID=g7039.t1;Parent=g7039;Name=g7039.t1 NODE_3109_length_4280_cov_79.0723 . five_prime_UTR 1361 1387 . - . ID=g7039.t1.utr5p1;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . exon 1127 1387 . - . ID=g7039.t1.exon1;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . CDS 1127 1360 . - 0 ID=cds.g7039.t1;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . exon 685 698 . - . ID=g7039.t1.exon2;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . CDS 685 698 . - 0 ID=cds.g7039.t1;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . exon 473 563 . - . ID=g7039.t1.exon3;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . CDS 473 563 . - 1 ID=cds.g7039.t1;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . exon 46 142 . - . ID=g7039.t1.exon4;Parent=g7039.t1 NODE_3109_length_4280_cov_79.0723 . CDS 46 142 . - 0 ID=cds.g7039.t1;Parent=g7039.t1;3_prime_partial=true #PROT g7039.t1 g7039 MFSSNCSRLLFSLAVVGHSIARTQATTQWSRRSFASLSKCNMADEVNKAQAAAPEGDTIFGKIVRKEIPSNVVYEDDRAFAFRDISPQAPVHILVLPKKPITQLSKSEDEDESLLGHLLLVAKKVAQQEKLDKGFRIVINDGPEG # ORIGINAL: g7040.t1 original gene structure, not modified by PASA NODE_3109_length_4280_cov_79.0723 AUGUSTUS gene 2426 4074 . + . ID=g7040;Name=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS mRNA 2426 4074 . + . ID=g7040.t1;Parent=g7040;Name=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS exon 2426 2498 . + . ID=g7040.t1.exon1;Parent=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS CDS 2426 2498 . + 0 ID=cds.g7040.t1;Parent=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS exon 2649 2948 . + . ID=g7040.t1.exon2;Parent=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS CDS 2649 2948 . + 2 ID=cds.g7040.t1;Parent=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS exon 3215 4074 . + . ID=g7040.t1.exon3;Parent=g7040.t1 NODE_3109_length_4280_cov_79.0723 AUGUSTUS CDS 3215 4074 . + 2 ID=cds.g7040.t1;Parent=g7040.t1 #PROT g7040.t1 g7040 MGPRRMAWSALHLLLAVVVAIGCLGRCDAGMSLSVADEVFLVVNGTLSFTVGFSSVFASASLAITASNGGVTVSPATTDVSGLLVSATITVTAKSPGVTTVEFSVTPFSMEPAFDPIYLQVNVYAPKCTGRTLTSKNDVMLMSDCVIVYGDITIGTQLSDISGLFTSMSPWIYGSLYIRDNPSIARVNTTVARVTHIFIESNGALTSIDLSSLVRVDGNLTISHNNQLSDIAGLASLSSVGGMLTISRCSQLTQITGLGMIYSVKGLSIGSNPQLGELQLSSLTSVGTWGIAFEDNSGMTDIDLSYVSGPVGGDVVSGVYIKDMNSLERVFFTSITTINGNFKIGNAPALEDLAIYLTAVNGDIDFHGLSSFCRWSFNWPYFTDLTTGSAHFDLPGMDNTCMNRGACVFV* # ORIGINAL: g5136.t1 original gene structure, not modified by PASA NODE_5340_length_900_cov_34.6109 AUGUSTUS gene 251 788 . - . ID=g5136;Name=g5136.t1 NODE_5340_length_900_cov_34.6109 AUGUSTUS mRNA 251 788 . - . ID=g5136.t1;Parent=g5136;Name=g5136.t1 NODE_5340_length_900_cov_34.6109 AUGUSTUS exon 645 788 . - . ID=g5136.t1.exon1;Parent=g5136.t1 NODE_5340_length_900_cov_34.6109 AUGUSTUS CDS 645 788 . - 0 ID=cds.g5136.t1;Parent=g5136.t1 NODE_5340_length_900_cov_34.6109 AUGUSTUS exon 251 421 . - . ID=g5136.t1.exon2;Parent=g5136.t1 NODE_5340_length_900_cov_34.6109 AUGUSTUS CDS 251 421 . - 0 ID=cds.g5136.t1;Parent=g5136.t1 #PROT g5136.t1 g5136 MRPEDAKQAWQLLVKYLEKFTVAPVYTEDEFVHWFMPREGVINSFVVEDPQTHKLTDLISFYALPSSVMSHPLHKTLRAAYSYYNVAAKTPLLQLMQDALTLAKG # ORIGINAL: g8556.t1 original gene structure, not modified by PASA NODE_3046_length_4458_cov_82.9003 AUGUSTUS gene 1930 2684 . - . ID=g8556;Name=g8556.t1 NODE_3046_length_4458_cov_82.9003 AUGUSTUS mRNA 1930 2684 . - . ID=g8556.t1;Parent=g8556;Name=g8556.t1 NODE_3046_length_4458_cov_82.9003 AUGUSTUS exon 2628 2684 . - . ID=g8556.t1.exon1;Parent=g8556.t1 NODE_3046_length_4458_cov_82.9003 AUGUSTUS CDS 2628 2684 . - 0 ID=cds.g8556.t1;Parent=g8556.t1 NODE_3046_length_4458_cov_82.9003 AUGUSTUS exon 1930 2265 . - . ID=g8556.t1.exon2;Parent=g8556.t1 NODE_3046_length_4458_cov_82.9003 AUGUSTUS CDS 1930 2265 . - 0 ID=cds.g8556.t1;Parent=g8556.t1 #PROT g8556.t1 g8556 MMSDQDGISSSDDEGRPAMSLIKEEKPRRKSSTLVIERPKQLVSPVALDATVSSALEGLPSGLLVGNNGSASSNNGSLKVIQGDRLTKSLNESLFAAPAGVYDPVVFNILEVPADQLAVGRRGERSYGHV* # PASA_UPDATE: g4107.t1, single gene model update, valid-1, status:[pasa:asmbl_4498,status:3], valid-1 NODE_2524_length_6010_cov_36.2603 . gene 251 5690 . + . ID=g4107;Name=g4107.t1 NODE_2524_length_6010_cov_36.2603 . mRNA 251 5690 . + . ID=g4107.t1;Parent=g4107;Name=g4107.t1 NODE_2524_length_6010_cov_36.2603 . five_prime_UTR 251 444 . + . ID=g4107.t1.utr5p1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 251 466 . + . ID=g4107.t1.exon1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 445 466 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 632 685 . + . ID=g4107.t1.exon2;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 632 685 . + 2 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 797 832 . + . ID=g4107.t1.exon3;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 797 832 . + 2 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 954 976 . + . ID=g4107.t1.exon4;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 954 976 . + 2 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 1261 1454 . + . ID=g4107.t1.exon5;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 1261 1454 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 1744 1858 . + . ID=g4107.t1.exon6;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 1744 1858 . + 1 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 2084 2179 . + . ID=g4107.t1.exon7;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 2084 2179 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 2415 2480 . + . ID=g4107.t1.exon8;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 2415 2480 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 2728 2811 . + . ID=g4107.t1.exon9;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 2728 2811 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 3199 3440 . + . ID=g4107.t1.exon10;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 3199 3440 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 3734 3857 . + . ID=g4107.t1.exon11;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 3734 3857 . + 1 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 4109 4312 . + . ID=g4107.t1.exon12;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 4109 4312 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 4525 4665 . + . ID=g4107.t1.exon13;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 4525 4665 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . exon 4939 5690 . + . ID=g4107.t1.exon14;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . CDS 4939 5091 . + 0 ID=cds.g4107.t1;Parent=g4107.t1 NODE_2524_length_6010_cov_36.2603 . three_prime_UTR 5092 5690 . + . ID=g4107.t1.utr3p1;Parent=g4107.t1 #PROT g4107.t1 g4107 MFLKKSKDKEKEKEKEKSSSKSSSGSVEGKMSKMKISVSKEDDRYVLGDGSAQLENGGKLFVRILDGKEIYSKKNGDSVKPFCMVEFEHNQILTPSSEGPKPKWNHEFHFDVTEPEGELQIIVYDRAALKGGNDCLGTLAILPSYEDGRLYDEWFDLRLREGAEKAEAKLHIQISFKKQDSRGLTINDFELLKVIGKGSFGKVMQVRKKDTKRIYAMKILTKSHLVERDEVAHTRSERKILAKNTNPFLVGLKFSFQTKEKIYLVLDYINGGELFFHLQNEGKFPEPRAKFYAAQLVLAIEDLHKMNIIYRDLKPENILVDYNGYIALTDFGLCKEDVQYNETTNTFCGTPEYMAPEVLQQKGYGPPVDWWTLGILLYEMLTGLPPFYDENTNQMYHKILFGDLAFTDDVSSKARSLINGLLQRDPKKRLGSGRTDAEDVRKHPFFADVEWKELLAKKVKPPWKPQLDSKLDTSNFDPEFTEMTPKDSMVQSSHLSSTVQEQFKGFTYVDDSELSRD* # PASA_UPDATE: g5331.t1, single gene model update, valid-1, status:[pasa:asmbl_6656,status:12], valid-1 NODE_3866_length_2596_cov_39.0381 . gene 142 802 . - . ID=g5331;Name=g5331.t1 NODE_3866_length_2596_cov_39.0381 . mRNA 142 802 . - . ID=g5331.t1;Parent=g5331;Name=g5331.t1 NODE_3866_length_2596_cov_39.0381 . five_prime_UTR 777 802 . - . ID=g5331.t1.utr5p1;Parent=g5331.t1 NODE_3866_length_2596_cov_39.0381 . exon 342 802 . - . ID=g5331.t1.exon1;Parent=g5331.t1 NODE_3866_length_2596_cov_39.0381 . CDS 342 776 . - 0 ID=cds.g5331.t1;Parent=g5331.t1 NODE_3866_length_2596_cov_39.0381 . exon 142 219 . - . ID=g5331.t1.exon2;Parent=g5331.t1 NODE_3866_length_2596_cov_39.0381 . CDS 142 219 . - 0 ID=cds.g5331.t1;Parent=g5331.t1;3_prime_partial=true #PROT g5331.t1 g5331 MGGAIGLKSVGEDSASIASYDREDGVRIDLISILPREVSTKIFSHLSDYKDVHSCASVSRCWRSVAHDEFIWKGFCRRRWAGKHHTPPKDVPIHCETLAERGVPQAILSTLPQWKIAYYFLERDSTRTSITMAEMCAFDWLFEFRNISSVLGIEEFPSCGARYYSDFTCSN # ORIGINAL: g2955.t1 original gene structure, not modified by PASA NODE_5000_length_1090_cov_26.4719_potentialcontaminant AUGUSTUS gene 2 1090 . + . ID=g2955;Name=g2955.t1 NODE_5000_length_1090_cov_26.4719_potentialcontaminant AUGUSTUS mRNA 2 1090 . + . ID=g2955.t1;Parent=g2955;Name=g2955.t1 NODE_5000_length_1090_cov_26.4719_potentialcontaminant AUGUSTUS exon 2 1090 . + . ID=g2955.t1.exon1;Parent=g2955.t1 NODE_5000_length_1090_cov_26.4719_potentialcontaminant AUGUSTUS CDS 2 1090 . + 2 ID=cds.g2955.t1;Parent=g2955.t1 #PROT g2955.t1 g2955 IIMVPPLLVLGAIYFGVEFQWKTMLMCAAFYLINGLGITAGYHRLFSHRSYNATRPLQTLMAFCGAGAFQGSVKWWARNHRIHHNYIDTDKDPYNAKRGFMYSHLGWMLMKQDYEILGRVDISDLNANKMLRFQHVHYFPLAMMSGIILPTLICGLGWGDWAGGYFYAALLKMVLIHHGTFCINSLAHTDVFGAMQQYSEEHSAYDSVACALISFGEGYHNFHHEFSQDFRNGLKWFDYDPTKWTILLFNYLGMAKNLVRTPDHIIAHNFYGVRKDQSKRVYDDAVSRLQVIETKTAVPADAQWAWDEIARRCEAGAKLMVIGKYVIDIERKLPLGSVSGTHSSKLTAAPWCDAHPGGRKVL # PASA_UPDATE: g11477.t1, single gene model update, valid-1, status:[pasa:asmbl_8256,status:12], valid-1 NODE_5738_length_733_cov_34.1398 . gene 35 671 . - . ID=g11477;Name=g11477.t1 NODE_5738_length_733_cov_34.1398 . mRNA 35 671 . - . ID=g11477.t1;Parent=g11477;Name=g11477.t1 NODE_5738_length_733_cov_34.1398 . exon 526 671 . - . ID=g11477.t1.exon1;Parent=g11477.t1 NODE_5738_length_733_cov_34.1398 . CDS 526 671 . - 0 ID=cds.g11477.t1;Parent=g11477.t1 NODE_5738_length_733_cov_34.1398 . exon 35 137 . - . ID=g11477.t1.exon2;Parent=g11477.t1 NODE_5738_length_733_cov_34.1398 . CDS 35 137 . - 1 ID=cds.g11477.t1;Parent=g11477.t1;3_prime_partial=true #PROT g11477.t1 g11477 MDVQSVSGVVESLKVVTRENSIRIAKYAFDYATRNNRKKVTAIHKANIMKLGDGLFLNSCKEVSALYPMIKFESMIVDNCCMQ # ORIGINAL: g1142.t1 original gene structure, not modified by PASA NODE_2895_length_4816_cov_40.2739 AUGUSTUS gene 1632 2645 . + . ID=g1142;Name=g1142.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS mRNA 1632 2645 . + . ID=g1142.t1;Parent=g1142;Name=g1142.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS exon 1632 2645 . + . ID=g1142.t1.exon1;Parent=g1142.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS CDS 1632 2645 . + 0 ID=cds.g1142.t1;Parent=g1142.t1 #PROT g1142.t1 g1142 MASQPDVSFSSLPIEVIVYHLLPFLSNKDLASLAGVNVLLRCALKHMRVYRLRHAFSKQYWESAAFRNAVWADIPRERLELRLDGAQDVRGDLFVLDGIHALHLSSCYYVTDVSALGSVHSLDLSCTDVTDVSLLGGVHALDLSDCYEVEDVSALGGVHSLNLSYCEKVTDVSALAGVHSLNLSHCKGVMDVSCLGGVHSLNLSDCLNVTDLSALGDVHSLDLSRCKGVMDVSELDNVHSLNLSHCKGVMDVSALGGVHSLNLSYCDGVTEVSALCGVHSLNLSGCQRVTDISALGGVHSLNFSHCYVVTDVSAFINSILLGFVCVKFDQSLPLQKK* # PASA_UPDATE: g1143.t1, single gene model update, valid-1, status:[pasa:asmbl_5197,status:12], valid-1 NODE_2895_length_4816_cov_40.2739 . gene 3437 4664 . + . ID=g1143;Name=g1143.t1 NODE_2895_length_4816_cov_40.2739 . mRNA 3437 4664 . + . ID=g1143.t1;Parent=g1143;Name=g1143.t1 NODE_2895_length_4816_cov_40.2739 . five_prime_UTR 3437 3481 . + . ID=g1143.t1.utr5p1;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . exon 3437 3574 . + . ID=g1143.t1.exon1;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . CDS 3482 3574 . + 0 ID=cds.g1143.t1;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . exon 3927 4001 . + . ID=g1143.t1.exon2;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . CDS 3927 4001 . + 0 ID=cds.g1143.t1;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . exon 4299 4389 . + . ID=g1143.t1.exon3;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . CDS 4299 4389 . + 0 ID=cds.g1143.t1;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . exon 4510 4664 . + . ID=g1143.t1.exon4;Parent=g1143.t1 NODE_2895_length_4816_cov_40.2739 . CDS 4510 4664 . + 2 ID=cds.g1143.t1;Parent=g1143.t1 #PROT g1143.t1 g1143 MSSIGRYFRVTTFGESHCRGVGCIVDGVPPQMALTEADIQPQLSRRRPGQSALATKRDEKDLVSILSGTENGLTLGTPIGLFVPNEDQRPGDYSSMSDIPRPSHADYTYQEKYGVKASSGGGRSSARETIGACLFHG* # ORIGINAL: g1141.t1 original gene structure, not modified by PASA NODE_2895_length_4816_cov_40.2739 AUGUSTUS gene 301 1205 . - . ID=g1141;Name=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS mRNA 301 1205 . - . ID=g1141.t1;Parent=g1141;Name=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS exon 1082 1205 . - . ID=g1141.t1.exon1;Parent=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS CDS 1082 1205 . - 0 ID=cds.g1141.t1;Parent=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS exon 752 864 . - . ID=g1141.t1.exon2;Parent=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS CDS 752 864 . - 2 ID=cds.g1141.t1;Parent=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS exon 301 455 . - . ID=g1141.t1.exon3;Parent=g1141.t1 NODE_2895_length_4816_cov_40.2739 AUGUSTUS CDS 301 455 . - 0 ID=cds.g1141.t1;Parent=g1141.t1 #PROT g1141.t1 g1141 MMRVLAAAVGTGRSVRVAANTRLWAAVPHRDYATAQKGSGAGPVLNKYSRILTQEKAHGAAQAMLYATGLSEADMAKPQVGICSMWYEGNPCNMHLDKFAVTIKESVQKADLVGYRFNTIGVSDGMSMGT # PASA_UPDATE: g4026.t1, single gene model update, valid-1, status:[pasa:asmbl_6836,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 72770 76563 . + . ID=g4026;Name=g4026.t1 NODE_3_length_87188_cov_41.3298 . mRNA 72770 76563 . + . ID=g4026.t1;Parent=g4026;Name=g4026.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 72770 72799 . + . ID=g4026.t1.utr5p1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 72770 72848 . + . ID=g4026.t1.exon1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 72800 72848 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 73082 73338 . + . ID=g4026.t1.exon2;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 73082 73338 . + 2 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 73528 73617 . + . ID=g4026.t1.exon3;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 73528 73617 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 73756 73905 . + . ID=g4026.t1.exon4;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 73756 73905 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 74101 74187 . + . ID=g4026.t1.exon5;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 74101 74187 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 74336 74422 . + . ID=g4026.t1.exon6;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 74336 74422 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 74639 74851 . + . ID=g4026.t1.exon7;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 74639 74851 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 75050 75171 . + . ID=g4026.t1.exon8;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 75050 75171 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 75386 75455 . + . ID=g4026.t1.exon9;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 75386 75455 . + 1 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 75594 75773 . + . ID=g4026.t1.exon10;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 75594 75773 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 75932 76126 . + . ID=g4026.t1.exon11;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 75932 76126 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . exon 76237 76563 . + . ID=g4026.t1.exon12;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . CDS 76237 76437 . + 0 ID=cds.g4026.t1;Parent=g4026.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 76438 76563 . + . ID=g4026.t1.utr3p1;Parent=g4026.t1 #PROT g4026.t1 g4026 MAEVEEKLAKMHVEERVFYTSESTGNDETGDGTLAKPFKSIARVFRGVSDTSTPVVFVDAKPSADGQAPAEPFEKLPAAQVKKAKKTAAQDEKKSQAKEKKEAEDSRHREKNFEEARKVVIKENTDLPAARQIKIRDAKESRGHRVKVFGWVHHLRRQGKNLMFIELRDGTGFLQCVLNDDLCKTYEAITLSTEASVALFGVIQPVPEGKTAPGGHEMAVDFWTLVSNAPSGGLDNFFNEESEIDVKLDNRHMLLRTDTLSKILRLRSVVTHCFREHYFARGYVEVTPPTLVQTMCEGGSTLFKLDYFGEEAYLTQSSQLYLETAIPALGDVFCIAQSYRAEPSRTRRHLSEYTHVEAECSFITFEQLLDRLEDLVCDVVDRVLKSPFADLLREVNPDFVAPSRPFLRMSYAEAIEYLQRENIRKDDGSEYQFGEDIPEAPERRMTDKINRPILLTRFPAEIKAFYMQRTGDDRRVTESVDLLMPNVGEIIGGSMRLWNEEELLAAYKREGLDPATYYWYVDQRRYGSCPHGGYGLGLDRFLTWMLGRDHIRDVCFYPRFIGRCKP* # ORIGINAL: g4018.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 44044 46362 . - . ID=g4018;Name=g4018.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 44044 46362 . - . ID=g4018.t1;Parent=g4018;Name=g4018.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 44591 46362 . - . ID=g4018.t1.exon1;Parent=g4018.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 44591 46362 . - 0 ID=cds.g4018.t1;Parent=g4018.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 44044 44209 . - . ID=g4018.t1.exon2;Parent=g4018.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 44044 44209 . - 1 ID=cds.g4018.t1;Parent=g4018.t1 #PROT g4018.t1 g4018 MSHKRLNRPQSAPRTGRRLSATDAADGVSPWLASSTQGAVHTASHATVKIEEVIPLNLSRGNGSGGGSGSGGGGVAGGDAAGAAPSAGSVGGAPLGSTGNLSTASAPAGTPSAVLGAYHRSSRGDRLVAAALVESASQIKTHPLAQSVASPSAGASGVASKGGAPGSGTSSRRSSIGGSSSLAHQKSPGVGKAEAAARRPSSARADAHSRLASARPSPYASHSQVQPEAQDSAHAQQYHRPFTAAAVQSLADTNQPAHDEDGQYHDLENAMGNMSVASWNASGPGDRMSRGDVSQGGMDGGSGGLCDWEADDLREAALAMGANASHADGGAVYDDLAAYQSPRPSQSFQNANASRGHSRMSVRSQSRTTTQRDALASAMETFHLDGVDVESFQEFLAYLRAYQDDCEQRGLYDEALMAQQRIAQTRDEFARHTSSIVSQRHDSERAAVEDAHREALDAFHTEWAGKRALFEDRAADMVAAMRQRHDDDLARFDSFHAEYRPKASKQTQELLKAEYTAARLGQYATAADVQRERLRLESEELQTRWRDRQRAVDKKREMVVAKQEAEICALFDRIDRLRVLGLKNMEAELQRLESRARALRRQLEVSQLHENTELTKTIRTAAVVPLNTARELTLGVASQVGMPIQ* # PASA_UPDATE: g4024.t1, single gene model update, valid-1, status:[pasa:asmbl_6842,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 63960 64935 . + . ID=g4024;Name=g4024.t1 NODE_3_length_87188_cov_41.3298 . mRNA 63960 64935 . + . ID=g4024.t1;Parent=g4024;Name=g4024.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 63960 63994 . + . ID=g4024.t1.utr5p1;Parent=g4024.t1 NODE_3_length_87188_cov_41.3298 . exon 63960 64935 . + . ID=g4024.t1.exon1;Parent=g4024.t1 NODE_3_length_87188_cov_41.3298 . CDS 63995 64363 . + 0 ID=cds.g4024.t1;Parent=g4024.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 64364 64935 . + . ID=g4024.t1.utr3p1;Parent=g4024.t1 #PROT g4024.t1 g4024 MACIKASVAVRGGMAPIRTGILRCLHKYTTLGSAADEPTRGSTQTGAVSATAPPTPQHSQHPVDSTQASSTPGERAPLTAGQAAAAVWEDDVNPITKERGGPKGPEPTRFGDWERKGRVSDF* # ORIGINAL: g4003.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 319 978 . - . ID=g4003;Name=g4003.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 319 978 . - . ID=g4003.t1;Parent=g4003;Name=g4003.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 319 978 . - . ID=g4003.t1.exon1;Parent=g4003.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 319 978 . - 0 ID=cds.g4003.t1;Parent=g4003.t1 #PROT g4003.t1 g4003 MPTVEVGGMRRGEAGSRNGRASITHRHTTDGVSLGALRTRTLALESTGIQRQVQAHPTLQTLAPHPHHKLAVPGNERSGDDKESRRRTKSLDPSISPGRALLNSLATSRPSTSGRDAPISPTLERALTRMKIVRNADNPLEERRLVHIEDLAPLAEQGDVEAINALAHIYLNQRLYTKAFQLFEQGMLEGDERAVYEVAVMHYDGLGIQIDSVSGTVRI* # PASA_UPDATE: g4014.t1, single gene model update, valid-1, status:[pasa:asmbl_6831,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 26058 34246 . + . ID=g4014;Name=g4014.t1 NODE_3_length_87188_cov_41.3298 . mRNA 26058 34246 . + . ID=g4014.t1;Parent=g4014;Name=g4014.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 26058 26191 . + . ID=g4014.t1.utr5p1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 26628 26658 . + . ID=g4014.t1.utr5p2;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 26058 26191 . + . ID=g4014.t1.exon1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 26628 26719 . + . ID=g4014.t1.exon2;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 26659 26719 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 26826 26955 . + . ID=g4014.t1.exon3;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 26826 26955 . + 2 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 27083 27239 . + . ID=g4014.t1.exon4;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 27083 27239 . + 1 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 27377 27454 . + . ID=g4014.t1.exon5;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 27377 27454 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 27658 27734 . + . ID=g4014.t1.exon6;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 27658 27734 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 27874 28033 . + . ID=g4014.t1.exon7;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 27874 28033 . + 1 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 28165 28186 . + . ID=g4014.t1.exon8;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 28165 28186 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 28445 28720 . + . ID=g4014.t1.exon9;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 28445 28720 . + 2 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 28965 29692 . + . ID=g4014.t1.exon10;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 28965 29692 . + 2 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 29865 30006 . + . ID=g4014.t1.exon11;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 29865 30006 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 30233 30319 . + . ID=g4014.t1.exon12;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 30233 30319 . + 2 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 30548 30669 . + . ID=g4014.t1.exon13;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 30548 30669 . + 2 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 30785 30880 . + . ID=g4014.t1.exon14;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 30785 30880 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 31143 32605 . + . ID=g4014.t1.exon15;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 31143 32605 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 32730 32844 . + . ID=g4014.t1.exon16;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 32730 32844 . + 1 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 32950 33122 . + . ID=g4014.t1.exon17;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 32950 33122 . + 0 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 33345 33488 . + . ID=g4014.t1.exon18;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 33345 33488 . + 1 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . exon 33865 34246 . + . ID=g4014.t1.exon19;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . CDS 33865 34087 . + 1 ID=cds.g4014.t1;Parent=g4014.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 34088 34246 . + . ID=g4014.t1.utr3p1;Parent=g4014.t1 #PROT g4014.t1 g4014 MDESVTTTSGVKVQDGFGRSETRALLKRHSVSDMSKGTHGKWMDDERKKLIAYEYLCHLEEAKQWIEACIQEQLPTTTEMEEALTNGVYLCKLAMFFCPTAVTKKKIYDFDLTVFKEHGLKFRHTDNINHWVTAMEKAGLPTIFYPTTTDLYDRKNLPKVIYCIHALSHFLFKKGIAPKIKDLVGKAQFTDDEINAMNKQLKESGIEMPSFGKISGILSSELPDGDAELHAAIAKINEAIDKGVASDTLDALNNDAAELNGVAGDRRDSYQQALAAAKSTKGARSDAKAAAKGPDAPPSTDMYDKYLTRDEIQEQVDDVNFRAAIAEINAAVAAADESRTLRALQNPIAKIHFVKLQHAAHYLDFLARGMALKARIIANADAAAAAGSSVSVAAPDAASAVVVTAAASDAVHANGETPAPTAEVASKTLNVSSSTKSMRRMSVNERAPIISAFGESGKEAAAVDAAEFGVDLTQTEIQVAVNKANKAVEREELLLRSEPAIIKLQARIRGNLVRREFAARQKHFEDNVDKIVKIQRWWRAQKERRLREAREKHFRDNEEKIIKMQAFIRGLLERRRYKEHLKRFNDNVDKIKKLQGAIKGFQARKNYLALTSGNDVSPSTLSRFLHLLDQSDVDFEEELELSRLKQRVVIGIRDNGKLEQELNALDLKIGLLVRNRITLEDVVKHTKKISKRKTNGDDNLKSLSKEKRVQLEHYQHMFYLLQTQPKYFAKLIFVMPQSRTTKFMENVILTVFNFAQNAREECLLLKLFREAILEEMERVTEMRDFITGNPTVIKMVLQYNRGAREMTFLRELLQPLVSSVMDNRDINLNTSPIDIYKGWINKMEAETGKASELAYDVTNEQALEHANVREEFEKHVADLKVATRRFQDAIIAALERMPFGIRYIAMHLRKVVATKFPQASEDEVLKVVGNLVYYRYMNPAIVAPDAFDVVGGGGSVGGSLGGDLLSPLQRRNLGEVAKLLQRIAANNSFGANESYLEPLNSFITESWVSFRDYLVRTSTVAEAEEHFLVDEYSDATLRSHPVIFISPREIYSTHRLLSENIDEVTAGPEDPMRLILSDLGTPPPAPNDNEEGGEAEAAAAAADSGEISLALTNRFTMVSDENADARTTFVRTKRLVVSILRFQRGGTLGEILATPCTPQQEEQHAVYNSESAKQKLRHAENETAEERARRSSAPDDADQLLSLSDMKKKIAINLQVLETAGLVSKEDDYQAIVNAIAKDIRNQRAYRLQRRAEIEKLRKTVGNLEEKAKYFHQQEESYTAYTKGIMDNMAKGVKPKKRNGFIELFRSSNKLKIGEHKFGSISYSAKKLKEKKILLELEGVPDSSLGSVKITMSSNEIGVFTVTTSFLGVQQGDPAELLLEDLLQYQYDGVSVMRMFGTAKINVNLLLFLLNRKFYGK* # PASA_UPDATE: g4025.t1, single gene model update, valid-1, status:[pasa:asmbl_6835,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 68217 72484 . + . ID=g4025;Name=g4025.t1 NODE_3_length_87188_cov_41.3298 . mRNA 68217 72484 . + . ID=g4025.t1;Parent=g4025;Name=g4025.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 68217 68345 . + . ID=g4025.t1.utr5p1;Parent=g4025.t1 NODE_3_length_87188_cov_41.3298 . exon 68217 68535 . + . ID=g4025.t1.exon1;Parent=g4025.t1 NODE_3_length_87188_cov_41.3298 . CDS 68346 68535 . + 0 ID=cds.g4025.t1;Parent=g4025.t1 NODE_3_length_87188_cov_41.3298 . exon 68739 72484 . + . ID=g4025.t1.exon2;Parent=g4025.t1 NODE_3_length_87188_cov_41.3298 . CDS 68739 72253 . + 2 ID=cds.g4025.t1;Parent=g4025.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 72254 72484 . + . ID=g4025.t1.utr3p1;Parent=g4025.t1 #PROT g4025.t1 g4025 MVRCAFVFAALVAILFASIIPFTAALDCGSIGALPTAINKIKRTTVELVSDVLTKPTGPGSELVTGTFRNATVEYGMVNLTMASSVGYVVEATSGNRIQLERTVNMNEFRFLLSETYIAVNDDCNPMPCNSGTCTDGVNAFTCTCPAGIVGAVCEISLASNEQRCPRSPALSWSVPQVEQVVGFSIDVQIIPPEGPDAEVNITISSSNRTVAAVPPSLVFQVGRTTPLSFPITGLAEGFVDVTITVSSDSPRWNAVVLPVISVSFVVNATNSTGPNQRGGTAPTTPVCCNPKLNACQQGSCRVATPDTFRCDCIPSHTGLYCETPRLVQTNRLVWDGRTGQNATARACVSFEGLVGQRPYMTAVGTVAGDGSFMRLEADLSFLRRPGNASDVRGLTFTSMSIVFFFDRPIVSSARYEALSTGNSGYFFGSAPQLREGAFIRPFISVTKDFINYQPEEIPPFATEITFSDQLSVTYAPNVTTVTVGPMRGMFMLPRWAALLNGYGLDDAASKCAAEGARLCTSDDLEYASLQGYTSCVPGWTATTRTAGGQQQYLVSFPVAASGMAQCGTHAGAVSDAAGAGYRADKRAQFPAYCCMDDPAPGVDRAESVRYRLVPPAGHVYGVAAFPNYPKVVVRIKRTLAASRAALAAGLGSIVSRVPAHICVTLKDYSRAQPPLYLSAVAQFSADSNVLDIDASLLVDAGSTFSAIFVDVSPKSILNVTRLVLPFAVGTLTSTLVAPNNDTIAVEQSSSVGASSSVTPILSSANSSPGALNATASIGNATASTAAVSALVSSSGANGGTASLTSASSLIAGSPAPSPSPLATSSGSAVASPLSTTGPLPPRTFFAAPGGPLSIVASKFVCQPSCQGTVPLNAWTATLDDGSGDVDYSSSLNCTWDIKPVGAERMSATFSSFWTEDGKDALAIYELPKDGEGAPAQLLYATGVKDKGLKVVSRGPGMRVRFVSSPSVGYPGWTLQYSGCSRARSCSGHGACNDDGGCTCDFVYDGPNCERCFSGYEPTEPSRCTDGSLANDCTCRLPPKDGSSRVAIRVSVDGERLYSIGETIRAALSQALGIVLSRISRMTVASADLTGATVLFDILPGRGPRPTERAQEAVRQLRDRRSVLRTLLTMDQTGGVFTVDDATSSAALYSALETVPFVLCDDGVYREACPTSEEPVPSADDKYWEYAVVGSCVGAGITIIALGFMTHRESSKRKSREARARPARSNSMELQPVK* # ORIGINAL: g4009.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 14548 15289 . + . ID=g4009;Name=g4009.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 14548 15289 . + . ID=g4009.t1;Parent=g4009;Name=g4009.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 14548 14737 . + . ID=g4009.t1.exon1;Parent=g4009.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 14548 14737 . + 0 ID=cds.g4009.t1;Parent=g4009.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 14997 15289 . + . ID=g4009.t1.exon2;Parent=g4009.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 14997 15289 . + 2 ID=cds.g4009.t1;Parent=g4009.t1 #PROT g4009.t1 g4009 MLQAKQKAQKMEIWRLEKIIYDMKREHTEALEKMKAQYLEEKVRSQKVADSRVSSMEQKARKATLCIPIGKLQEALDCLASETKRISEENKALRAELVALIQKTRQQQQYKESLESQHKELLRDRELTHDIGKIRIRRAKVETKKKRPDTSTSSIADSIT* # PASA_UPDATE: g4021.t1, single gene model update, valid-1, status:[pasa:asmbl_6834,status:12],[pasa:asmbl_6839,status:12],[pasa:asmbl_6840,status:12],[pasa:asmbl_6841,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 52641 56924 . + . ID=g4021;Name=g4021.t1 NODE_3_length_87188_cov_41.3298 . mRNA 52641 56924 . + . ID=g4021.t1;Parent=g4021;Name=g4021.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 52641 52967 . + . ID=g4021.t1.utr5p1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 52641 54171 . + . ID=g4021.t1.exon1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 52968 54171 . + 0 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 54359 54470 . + . ID=g4021.t1.exon2;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 54359 54470 . + 2 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 54791 54926 . + . ID=g4021.t1.exon3;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 54791 54926 . + 1 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 55176 55209 . + . ID=g4021.t1.exon4;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 55176 55209 . + 0 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 55380 55498 . + . ID=g4021.t1.exon5;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 55380 55498 . + 2 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 55654 55817 . + . ID=g4021.t1.exon6;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 55654 55817 . + 0 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 56046 56115 . + . ID=g4021.t1.exon7;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 56046 56115 . + 1 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . exon 56404 56924 . + . ID=g4021.t1.exon8;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . CDS 56404 56499 . + 0 ID=cds.g4021.t1;Parent=g4021.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 56500 56924 . + . ID=g4021.t1.utr3p1;Parent=g4021.t1 #PROT g4021.t1 g4021 MSDDAVDPSVLKRTQKALGNIIKKPALTDKLLSKPPFRYLHDVISEYMRVTGYFKGMYGDDELVSDKVTSKEAKVAFLQKAIDAVSFMLDEPCSARPAKIVAGQEADRTNEFLQMLAKAYNNKCDDTEGVKRVVAGEHYGEKSSKSSSSKNGTTKEPSRGKDSKDSKEKEDRKSDRKDDRKDDRKDDRGKDKETEKEKDRKSSRKDDKKDDKKDDKGDRDRENKENERGSRRDKDRDSDRKEKSSSKDSKERDRDADKEKEKKREEEKEREKKREEEKEREREKEKEREREKEKEREREEREREEKKSRDEKPSKKDRRSARDDDGHHDSNAEEDEGRKAKDRRRRSHAETNGDADEDDAQLATPARPHSARAGRRREHHDDEDADAPDREQSAGTRDNSASGRRDSATGSARNRERPSSARLPPPKPKSKDGSEDQPGSRAASGNRPTVIVDGRKKDEDANDDDDDDDFIVVKSATGADDGGDVVISGDEDEEHGALVRKILETKKDLEGEGGERKSVAVDPSRQKERELFRKEIDKLRGSVQTLCRSANPLGKTMDYVQEDIDAMQKELETWREENQRHDRLLKEEMSTTQKSLEPLVAKLKDLDAQIEEQMEKINAVKSTIAKNDSNIEKMLSSIAFASKA* # ORIGINAL: g4020.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 49562 52117 . - . ID=g4020;Name=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 49562 52117 . - . ID=g4020.t1;Parent=g4020;Name=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 50992 52117 . - . ID=g4020.t1.exon1;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 50992 52117 . - 0 ID=cds.g4020.t1;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 50591 50851 . - . ID=g4020.t1.exon2;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 50591 50851 . - 2 ID=cds.g4020.t1;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 50254 50420 . - . ID=g4020.t1.exon3;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 50254 50420 . - 2 ID=cds.g4020.t1;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 49801 50043 . - . ID=g4020.t1.exon4;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 49801 50043 . - 0 ID=cds.g4020.t1;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 49562 49603 . - . ID=g4020.t1.exon5;Parent=g4020.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 49562 49603 . - 0 ID=cds.g4020.t1;Parent=g4020.t1 #PROT g4020.t1 g4020 MSSSSGSAHSDGEDASDRAAIDGGADDLEEDAALEDDDAVAVSATAEASVTFEGFGLDQRILRAIAKLGWRTPTPIQARAIPLALEGKDLLSRARTGSGKTAAYAIPVVQRILHGKSASGVGGDAGAGVRALVLVPSKELCRQVKQNFREIAAYCARDINVVDLAVDDNINSQRPALLELPDVLVSTPSRIVAHLDAGNVTLKDTLEMLVIDEADLLFSYGYEEDIRRLLDHLPRICQSFLMSATLSDDVDSLRKLVLHNPAVLRLEESQLPEAARLRQYLVRCEDDDKFLIAYTLIKLRIVKGKTIIFVNDTDRCYRLRLFLEQFAVRSCVLNPELPQNSRQHIVQEFNRGVYDIVIASDHADHDDAGDEAGVEDEPPAKRQKISAKKAAGKRKEDGEYGVARGVDFREVENVMNFDFPHTARAYVHRVGRTARGDKSGQALSFVSVEDEVILAKVEEALGATAAEHVIQPYTLNMAEIEPFRYRVADALRAVTKSTIKEARLKEIKAEILNSEKLKAHFEDNPRDLEALRHDKALHPARVQPHLRHVPAYLMPTSTRRPGQSASGASRGRGRGSARGAHRGRGARGGRGGRGQQDAKKRKEDPLKSFKFD* # ORIGINAL: g4004.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 1455 2780 . + . ID=g4004;Name=g4004.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 1455 2780 . + . ID=g4004.t1;Parent=g4004;Name=g4004.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 1455 2780 . + . ID=g4004.t1.exon1;Parent=g4004.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 1455 2780 . + 0 ID=cds.g4004.t1;Parent=g4004.t1 #PROT g4004.t1 g4004 MDVSLGNPAVRAHYDAATAGLPVAVAYIGDNKGKGVVTRRTLAAGETLWLEAPLVSMQHLENTASANVCNHCHRFLGSLADQIQFMCAYPQAPVDVVRALTTTCPAAVHIAAEMPGMVVPCAGGCGTLYCSVVCRDEAASAYHALLCVGPITDENHPLVLFKHHAVDTNEIFLLAARVIANIVSRWASNGGDLVAAALPYAVFANAPWWEIPHPEDMTTDHELVEFRQHLHRMISQSFELLRAALYREELAPVFTLDFFARIVGAFELNNVDMSFPSPLARLHDEIERMDEPLKTRASGIVAPIAARIAEVQAAREAAVVHGDDADCDDDGDGDEEGGEDDGGDWEDEDAGLGAVPGFDGTALCVLAGSMNHSCNPNVRVKAVVDGASGRMGVGAFALRDLAAGEELCFSYIDENKPVNERQLSLREYGFVCACDRCCAGL* # PASA_UPDATE: g4006.t1, single gene model update, valid-1, status:[pasa:asmbl_6828,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 8682 10135 . + . ID=g4006;Name=g4006.t1 NODE_3_length_87188_cov_41.3298 . mRNA 8682 10135 . + . ID=g4006.t1;Parent=g4006;Name=g4006.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 8682 8752 . + . ID=g4006.t1.utr5p1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . exon 8682 8768 . + . ID=g4006.t1.exon1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . CDS 8753 8768 . + 0 ID=cds.g4006.t1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . exon 8988 9243 . + . ID=g4006.t1.exon2;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . CDS 8988 9243 . + 2 ID=cds.g4006.t1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . exon 9850 9898 . + . ID=g4006.t1.exon3;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . CDS 9850 9898 . + 1 ID=cds.g4006.t1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . exon 10015 10135 . + . ID=g4006.t1.exon4;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . CDS 10015 10044 . + 0 ID=cds.g4006.t1;Parent=g4006.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 10045 10135 . + . ID=g4006.t1.utr3p1;Parent=g4006.t1 #PROT g4006.t1 g4006 MADVEESVVPMDAEGVSDGAGGEGASGEGLDTVPLEAVIGLDNTLTQLGSETPIDKPKSRANLQALPTRSYLDQTVVPVLMEALSHLARERPPNPLEYLAAFILKSKDKYDKAAQE* # ORIGINAL: g4015.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 35158 35376 . + . ID=g4015;Name=g4015.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 35158 35376 . + . ID=g4015.t1;Parent=g4015;Name=g4015.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 35158 35376 . + . ID=g4015.t1.exon1;Parent=g4015.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 35158 35376 . + 0 ID=cds.g4015.t1;Parent=g4015.t1 #PROT g4015.t1 g4015 MSTPASNMFLRTFATVVRAAKPKPSRLKDARTFDMDAQKRMQQYWVDFARNQTIEANTKVSVKTAKPERRVL* # ORIGINAL: g4019.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 47611 49340 . + . ID=g4019;Name=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 47611 49340 . + . ID=g4019.t1;Parent=g4019;Name=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 47611 47950 . + . ID=g4019.t1.exon1;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 47611 47950 . + 0 ID=cds.g4019.t1;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 48143 48316 . + . ID=g4019.t1.exon2;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 48143 48316 . + 2 ID=cds.g4019.t1;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 48517 48678 . + . ID=g4019.t1.exon3;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 48517 48678 . + 2 ID=cds.g4019.t1;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 48868 49340 . + . ID=g4019.t1.exon4;Parent=g4019.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 48868 49340 . + 2 ID=cds.g4019.t1;Parent=g4019.t1 #PROT g4019.t1 g4019 MRASAAYTALFIVALAGTCLALGEHCYHATPQDDKKEASPSTYCGAQSASSKMHGIIVHTDGSMAVKEMPAPEIKADEILVRVKCAGVNRLDLLQRAGKYPPPPGDIDILGIEVSGIVEAIGSRASGHGLSVGDRVCGLVPGGGYAEQAAMPVENAMRMPSDMTFAEGASIPEAWLTAYAALHYSARMRMGDTILLHAAASGVGTAAIQVIRAHCGPSCTIIAIAGSEDKLALCKRLGATHAINRHTTNFADFALSVTNNRGVDVVLDFVGGSHFADNVRALGLDGRMVMLGLLGGPIANTVDVSAILRKRLTVVGSTLRNRPRDYKARLASDFSRDIMHMFEQGTVTSVIDGQYPLERVAEAHERMQHNHNGGKIILNVSH* # ORIGINAL: g4027.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 76718 78455 . - . ID=g4027;Name=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 76718 78455 . - . ID=g4027.t1;Parent=g4027;Name=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 78167 78455 . - . ID=g4027.t1.exon1;Parent=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 78167 78455 . - 0 ID=cds.g4027.t1;Parent=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 77812 77897 . - . ID=g4027.t1.exon2;Parent=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 77812 77897 . - 2 ID=cds.g4027.t1;Parent=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 76718 77620 . - . ID=g4027.t1.exon3;Parent=g4027.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 76718 77620 . - 0 ID=cds.g4027.t1;Parent=g4027.t1 #PROT g4027.t1 g4027 MNPIEREVVGELLARLTVLDLKDMHRTVCPDAGIPQRKSDLVASILANERSFESFLRRRKISFDVLEAFLMTKRLPTDVPTKRELAHILMHYVASLSSLVLLLQEGHMSQYGDRLLAAGYANLSDLSSLTEDALTGLDIPDYHARVILRCVPGVHQNVRPPPPPKVLRAVSLQRDSKRQSTRRLDTAGRADIDGRHAGGGAAEHAAERVDTAEELPLDASMSLSLSLAQSHQSQLSRGDALSLPPVQTNGRVSLVAGAADPILMSARTNQQFLREYYLGPGDGDGRGFVYVFMSPDMLRMRKAVYKLGSATTGDPVARTCPRVDAQRKHYGNVRILDVYPAAFHAFATRLSRALLDRGEYCRPIDAVQCVNPACQTLHREWYGPAVRGGTADRAPHDPYPIIRKVIAFCIASASEWSPSGASPFA* # PASA_UPDATE: g4007.t1, single gene model update, valid-1, status:[pasa:asmbl_6829,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 10880 11820 . + . ID=g4007;Name=g4007.t1 NODE_3_length_87188_cov_41.3298 . mRNA 10880 11820 . + . ID=g4007.t1;Parent=g4007;Name=g4007.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 10880 10944 . + . ID=g4007.t1.utr5p1;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . exon 10880 11151 . + . ID=g4007.t1.exon1;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . CDS 10945 11151 . + 0 ID=cds.g4007.t1;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . exon 11298 11432 . + . ID=g4007.t1.exon2;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . CDS 11298 11432 . + 0 ID=cds.g4007.t1;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . exon 11569 11820 . + . ID=g4007.t1.exon3;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . CDS 11569 11742 . + 0 ID=cds.g4007.t1;Parent=g4007.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 11743 11820 . + . ID=g4007.t1.utr3p1;Parent=g4007.t1 #PROT g4007.t1 g4007 MSLARHNYSAPSEAAINSQIALEYSASYTYTALAAYFARDDVSLPGLRKFFAESSDEEREHAQKFIDYQTKRGGRVQFENLPAPDTEWKSALNALEAALALEKKVNEALLRITKVADENNDPHLGDFIESEFLDEQVESLNKLANMLTQLKRAGTDGLGLYLFDQDLLKKQ* # PASA_UPDATE: g4013.t1, single gene model update, valid-1, status:[pasa:asmbl_6824,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 24006 25457 . - . ID=g4013;Name=g4013.t1 NODE_3_length_87188_cov_41.3298 . mRNA 24006 25457 . - . ID=g4013.t1;Parent=g4013;Name=g4013.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 25342 25457 . - . ID=g4013.t1.utr5p1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . exon 25228 25457 . - . ID=g4013.t1.exon1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . CDS 25228 25341 . - 0 ID=cds.g4013.t1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . exon 24981 25076 . - . ID=g4013.t1.exon2;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . CDS 24981 25076 . - 0 ID=cds.g4013.t1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . exon 24685 24870 . - . ID=g4013.t1.exon3;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . CDS 24685 24870 . - 0 ID=cds.g4013.t1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . exon 24491 24566 . - . ID=g4013.t1.exon4;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . CDS 24491 24566 . - 0 ID=cds.g4013.t1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . exon 24006 24235 . - . ID=g4013.t1.exon5;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . CDS 24099 24235 . - 2 ID=cds.g4013.t1;Parent=g4013.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 24006 24098 . - . ID=g4013.t1.utr3p1;Parent=g4013.t1 #PROT g4013.t1 g4013 MGRGRWWPVALAATAVACAAAYVLLRSTNRRDGGANGQAPTQRTRTVQTPQRPASEANRRRKIATVGANNVILNATATGAFAVIKDAIDRLLVLATMYDIYIIAQCDSDEAEANITDALEREGVFKADIDKRKLLFCSTSVGKAHMARQLEPHLHIDGDTQSVTMLQPHVPMIIHVAESVASRAPANTQVAQSLASADLSRL* # ORIGINAL: g4012.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 21703 23805 . + . ID=g4012;Name=g4012.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 21703 23805 . + . ID=g4012.t1;Parent=g4012;Name=g4012.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 21703 23805 . + . ID=g4012.t1.exon1;Parent=g4012.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 21703 23805 . + 0 ID=cds.g4012.t1;Parent=g4012.t1 #PROT g4012.t1 g4012 MFVPRVVRVAPGTKPPNAAVIRQKAALQRSGCADAVKSASGDGESAHAIVRDSEEHMHALQQPQHEKNRISVDVDGVEESASNVAADRDDDGCNTLTATVQGHASSTHAVEDEYVKSYAREQRWPLEGEPVCVVCGRYGEYICDVTDCDVCSKECKAMHLLRDKDVRIAAPAGAGLGGDGCSNGSRPGEYTESDSVARLTALQVANIRARLSITVSGAPEVKPILGFSDCSLDATLAANLSNAGFESPTPIQMQVVPVALMGRDLLYMSATGSGKTLAFLLPLIARLAPHAAAQQAHERRTLAVVLAPTRELCLHIEAEAKVLAKGLRNMRTAAVVGGLPIAPQLHRLGQGAQIVVATPGRFIDVLKRCAGTEDDEDGLEDADGAGVVDSRLRKAAACIDLGGVRTVVVDEVDMMLNMGFVNQVRDVIGRLETAAASASYPRKIDAVGRFQRVLFSATVSSAVHDVAAAFLSRDHAFVAAGETRAPPSNIKQVLIWVEEASKKKRLFQLFADSKHYRPPIVVFVSSKAGADFLAAAIAEKCDVATTTLHGGLAQTERSRRLALFLSGDCPVLVATGIAGRGLDLGELQTVVNFDMPTNIDEYVHRIGRAGRMGEKGWAVSFVNAGDKYLFGHLIGVVGTSSQIPTQVTNLARTLPAASTAVTPARTSGSAPGGVEATKKRPRDESVFDMVKRLSKKSATE* # PASA_UPDATE: g4010.t1, single gene model update, valid-1, status:[pasa:asmbl_6830,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 15618 16645 . + . ID=g4010;Name=g4010.t1 NODE_3_length_87188_cov_41.3298 . mRNA 15618 16645 . + . ID=g4010.t1;Parent=g4010;Name=g4010.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 15618 15649 . + . ID=g4010.t1.utr5p1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . exon 15618 15731 . + . ID=g4010.t1.exon1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . CDS 15650 15731 . + 0 ID=cds.g4010.t1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . exon 15850 15961 . + . ID=g4010.t1.exon2;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . CDS 15850 15961 . + 2 ID=cds.g4010.t1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . exon 16098 16160 . + . ID=g4010.t1.exon3;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . CDS 16098 16160 . + 1 ID=cds.g4010.t1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . exon 16284 16645 . + . ID=g4010.t1.exon4;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . CDS 16284 16407 . + 1 ID=cds.g4010.t1;Parent=g4010.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 16408 16645 . + . ID=g4010.t1.utr3p1;Parent=g4010.t1 #PROT g4010.t1 g4010 MGRLRRSRTTKVDKELRKKFRTRRRTKDLDQIHEDLKPENSEKLAAQAVDPELPGLGQHYCIHCNRYFVDDKPLQEHLVSKIHKRRVKDLKGEPFTQEEAERAAGLGTDRGKRTPAPVAMDADENN* # PASA_UPDATE: g4008.t1, single gene model update, valid-1, status:[pasa:asmbl_6823,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 11860 13007 . - . ID=g4008;Name=g4008.t1 NODE_3_length_87188_cov_41.3298 . mRNA 11860 13007 . - . ID=g4008.t1;Parent=g4008;Name=g4008.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 12907 13007 . - . ID=g4008.t1.utr5p1;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . exon 12765 13007 . - . ID=g4008.t1.exon1;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . CDS 12765 12906 . - 0 ID=cds.g4008.t1;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . exon 12194 12649 . - . ID=g4008.t1.exon2;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . CDS 12194 12649 . - 2 ID=cds.g4008.t1;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . exon 11860 12065 . - . ID=g4008.t1.exon3;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . CDS 11953 12065 . - 2 ID=cds.g4008.t1;Parent=g4008.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 11860 11952 . - . ID=g4008.t1.utr3p1;Parent=g4008.t1 #PROT g4008.t1 g4008 MPPTAPGKAPMRAQEETTPQNGGKNVNFNNKIAWFAANVPEGPRQLWARHGGKLGSVDGSSVLFSDDNTDAETTALFAREDFAKGDLSIFRSALISDSLTSSRIHVPLYLLFPPDTVNNAQRQMRPSAPASGINAAGGSHAQATLANARAIQATSNGRLKENGAGSASRSTGPTITSATNNRTLTDADSQVLAKGLDLKSIPHISELTQPKVAFEDAAFFVGDELVTDTGYAIELR* # ORIGINAL: g4016.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 36273 41109 . + . ID=g4016;Name=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 36273 41109 . + . ID=g4016.t1;Parent=g4016;Name=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 36273 37042 . + . ID=g4016.t1.exon1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 36273 37042 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 37208 37502 . + . ID=g4016.t1.exon2;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 37208 37502 . + 1 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 37697 37858 . + . ID=g4016.t1.exon3;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 37697 37858 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 38197 38542 . + . ID=g4016.t1.exon4;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 38197 38542 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 38774 39117 . + . ID=g4016.t1.exon5;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 38774 39117 . + 2 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 39262 39474 . + . ID=g4016.t1.exon6;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 39262 39474 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 39668 39980 . + . ID=g4016.t1.exon7;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 39668 39980 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 40201 40523 . + . ID=g4016.t1.exon8;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 40201 40523 . + 2 ID=cds.g4016.t1;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 40825 41109 . + . ID=g4016.t1.exon9;Parent=g4016.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 40825 41109 . + 0 ID=cds.g4016.t1;Parent=g4016.t1 #PROT g4016.t1 g4016 MATAARTLAALWRLSPRFTLGTSSIRHATYFSGTATRCVSKRQFHALSSLSRTVSVQTAPTSGCHPSTALAMIHTSAPSNARKGGSKDGKDAPSSESSGSTPSDEGAANENGSSSSSSSSSSSSESENEESPPNRVVRAIARALHEANGPGRSGLVPLTVPQVYPEVLVVPIPRRPLFPDFSRLFEISDPALVREIEKRIKMGQPYVGAFLSRNTSDQEVRNVSDYGKIYQVGVFASIARTSRNGESLHLLLQGHRRIKIRHVVETSPVLKVNVDNLRDLPFNASDDILKATQSSVVQTIRDIVAINPMFKEQYEFYTVQRHGIDDMATLGDFGATTTSAEPHEMQAVLEELDVQERLNKALVLLKKEYVSTRLQSEIGRQVEDKIQKSQRQYYLMEQLKRIKKELGLEKDEKETLMEKFRDRIASLKMTDNVRDTINEEMNKLSLLESHSSEFSITRNYLDWLTSLPWGVHSEENLDLVRARCILDEDHYGLKEVKERILEFIAVAHLRGNVQGKIICFVGPPGVGKTSIAHSIARTLNRQFFRFSVGGMSDVAEIKGHRRTYVGAMPGKVVQALKKAKTSNPLILIDEIDKLGKGYQARDMMVLSSMILSSAQLCDLAIAFGYCFCLLTLVFMVQCLGDPASALLELLDPEQNSGFLDHYLDVPYDMSKVLFICTANVTDTIPGPLLDRMEVVRISGYVMDEKVAIAKQYLIPAATKAAGIENAWANIDDSAVAALVRWYCRESGVRNLQKHIEKIFRKIAFRIVSQSDAQTPITVRPENLHDFVGNPVFTTDRLYTHTPAGVVMGLAWTSMGGSTLFVEATSVMEQEGKMRTTGQMGDVMKESSQIAYTYSRAFMAQHIDPLSTFFAKASIHMHVPEGATPKDGPSAGCTMTTALLSLALGIPVRQNIAMTGEISLTGKVLPVGGIKEKLIAARRADVNCVVLPAPNKRDFNDLPDNIREGLEVHFADEYLDVFKVAFPGVHTVDVKPKDLPPVPPVPAPSVNNTAGAGAGAA* # PASA_UPDATE: g4017.t1, single gene model update, valid-1, status:[pasa:asmbl_6832,status:3], valid-1 # PASA_UPDATE: g4017.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6833,status:12],[pasa:asmbl_6838,status:13], valid-1 NODE_3_length_87188_cov_41.3298 . gene 41743 43848 . + . ID=g4017;Name=g4017.t1 NODE_3_length_87188_cov_41.3298 . mRNA 41743 43848 . + . ID=g4017.t1;Parent=g4017;Name=g4017.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 41743 42148 . + . ID=g4017.t1.utr5p1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . exon 41743 42445 . + . ID=g4017.t1.exon1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . CDS 42149 42445 . + 0 ID=cds.g4017.t1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . exon 42707 42821 . + . ID=g4017.t1.exon2;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . CDS 42707 42821 . + 0 ID=cds.g4017.t1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . exon 43052 43540 . + . ID=g4017.t1.exon3;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . CDS 43052 43540 . + 2 ID=cds.g4017.t1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . exon 43668 43848 . + . ID=g4017.t1.exon4;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . CDS 43668 43831 . + 2 ID=cds.g4017.t1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 43832 43848 . + . ID=g4017.t1.utr3p1;Parent=g4017.t1 NODE_3_length_87188_cov_41.3298 . mRNA 41750 43677 . + . ID=g4017.t1.1.5b6be70b;Parent=g4017;Name=g4017.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 41750 42148 . + . ID=g4017.t1.1.5b6be70b.utr5p1;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 41750 42445 . + . ID=g4017.t1.1.5b6be70b.exon1;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 42149 42445 . + 0 ID=cds.g4017.t1.1.5b6be70b;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 42707 42821 . + . ID=g4017.t1.1.5b6be70b.exon2;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 42707 42821 . + 0 ID=cds.g4017.t1.1.5b6be70b;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 43052 43677 . + . ID=g4017.t1.1.5b6be70b.exon3;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 43052 43584 . + 2 ID=cds.g4017.t1.1.5b6be70b;Parent=g4017.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . three_prime_UTR 43585 43677 . + . ID=g4017.t1.1.5b6be70b.utr3p1;Parent=g4017.t1.1.5b6be70b #PROT g4017.t1 g4017 MAAAPGAAVSMGLDASLAALQKSGDDLANLALYCARTYNSASTPAARDSALNATKKYACDALASVAYQLHSAATATNKGVERAGRALHTAGEEIYVTGQIIDLVIETGGLITPATVPSSTPVYLFEQRPPKVARLGRDPPQNNPLRTPMQFDLLNRVGTGADALDGVARSRIVARVVGGAASTTPKMPSMSLDVFGGGSTPTSPSLSRHANNAPLHSPLGLSLPRPAGTDPLAQSLAPRGVGRSHVATTFMAAPPPSIAPIAPVAPPKAPEVSKAAASAEPVILLEDAAVASTASESYSIVHAMYDYADDAPDSLALTTGMHVTLLSVAGDWMYGESPDGLRRGWFPASYVSTE* #PROT g4017.t1.1.5b6be70b g4017 MAAAPGAAVSMGLDASLAALQKSGDDLANLALYCARTYNSASTPAARDSALNATKKYACDALASVAYQLHSAATATNKGVERAGRALHTAGEEIYVTGQIIDLVIETGGLITPATVPSSTPVYLFEQRPPKVARLGRDPPQNNPLRTPMQFDLLNRVGTGADALDGVARSRIVARVVGGAASTTPKMPSMSLDVFGGGSTPTSPSLSRHANNAPLHSPLGLSLPRPAGTDPLAQSLAPRGVGRSHVATTFMAAPPPSIAPIAPVAPPKAPEVSKAAASAEPVILLEDAAVASTASESYSIGAMGVCAWMGVRVC* # ORIGINAL: g4011.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 16452 21046 . - . ID=g4011;Name=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 16452 21046 . - . ID=g4011.t1;Parent=g4011;Name=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 20858 21046 . - . ID=g4011.t1.exon1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 20858 21046 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 20188 20558 . - . ID=g4011.t1.exon2;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 20188 20558 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 19890 19921 . - . ID=g4011.t1.exon3;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 19890 19921 . - 1 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 19303 19406 . - . ID=g4011.t1.exon4;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 19303 19406 . - 2 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 18852 19055 . - . ID=g4011.t1.exon5;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 18852 19055 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 18339 18602 . - . ID=g4011.t1.exon6;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 18339 18602 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 17997 18059 . - . ID=g4011.t1.exon7;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 17997 18059 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 17680 17777 . - . ID=g4011.t1.exon8;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 17680 17777 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 17332 17458 . - . ID=g4011.t1.exon9;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 17332 17458 . - 1 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 17034 17183 . - . ID=g4011.t1.exon10;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 17034 17183 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 16739 16840 . - . ID=g4011.t1.exon11;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 16739 16840 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 16452 16514 . - . ID=g4011.t1.exon12;Parent=g4011.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 16452 16514 . - 0 ID=cds.g4011.t1;Parent=g4011.t1 #PROT g4011.t1 g4011 MSHTPRPPGAPGMHGTPHGVVMPGSLAAMGVSQSPAPSAGVRGIAPSRVAPAGTFSTFKGFAGTPTHPQAAGVYSQNTPGMTHGALTPQQKQLQQQAYIAQQRALAGMGMHGQAPTMQQMRPPGTPGTPATPMGQQQAKGKGPQVPQQAPATPATPAPGALGKAPSSGSMSQADRKRKSEAESLRRNRIMSVLTRVF*SRLYSDLQSFEQRLDAILMRKRMDMQESLRGPAKGDEAAGVTVDAAGEATGEAEPPAWSLRIEGRLLEDAAKAKSRRKFLSFVQRIIVEFDSAVMPTNNIVETIAGTTLAFRRRLLCTLCAMQWHRPPGFSDSDGFEIKRLGDRPVRCKVLLFLDYPTPVFKLSSALMRLLGIHTDTRAGVIAAIWGYVKKNKLQDTEDRKTIVCDKQLQKIFGMDRIAFTTLPALINAHLSPPDPVEIQYTIRINEEVKKDVCYDVDVEVEDTPRSSLFGLSGAMAKEIVALDESIQDLLGKINEHKIRREFMLEFAENPRLFIDKWIESQTRDLKASRQPCMLQVMSNAVGDPETERRSDFYAKPWAQEGVCRYISARIQQRRLQLEQELYGAMKTTQ* # PASA_UPDATE: g4005.t1, single gene model update, valid-1, status:[pasa:asmbl_6821,status:3], valid-1 # PASA_UPDATE: g4005.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6822,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 3445 8312 . - . ID=g4005;Name=g4005.t1 NODE_3_length_87188_cov_41.3298 . mRNA 3445 8312 . - . ID=g4005.t1;Parent=g4005;Name=g4005.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 8023 8312 . - . ID=g4005.t1.utr5p1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 7392 8312 . - . ID=g4005.t1.exon1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 7392 8022 . - 0 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 6970 7173 . - . ID=g4005.t1.exon2;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 6970 7173 . - 2 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 6336 6724 . - . ID=g4005.t1.exon3;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 6336 6724 . - 2 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 6007 6107 . - . ID=g4005.t1.exon4;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 6007 6107 . - 0 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 5248 5834 . - . ID=g4005.t1.exon5;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 5248 5834 . - 1 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . exon 3445 3924 . - . ID=g4005.t1.exon6;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . CDS 3536 3924 . - 2 ID=cds.g4005.t1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 3445 3535 . - . ID=g4005.t1.utr3p1;Parent=g4005.t1 NODE_3_length_87188_cov_41.3298 . mRNA 4885 8312 . - . ID=g4005.t1.1.5b6be70b;Parent=g4005;Name=g4005.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 8023 8312 . - . ID=g4005.t1.1.5b6be70b.utr5p1;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 7392 8312 . - . ID=g4005.t1.1.5b6be70b.exon1;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 7392 8022 . - 0 ID=cds.g4005.t1.1.5b6be70b;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 6970 7173 . - . ID=g4005.t1.1.5b6be70b.exon2;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 6970 7173 . - 2 ID=cds.g4005.t1.1.5b6be70b;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 6336 6724 . - . ID=g4005.t1.1.5b6be70b.exon3;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 6336 6724 . - 2 ID=cds.g4005.t1.1.5b6be70b;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 6007 6107 . - . ID=g4005.t1.1.5b6be70b.exon4;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 6007 6107 . - 0 ID=cds.g4005.t1.1.5b6be70b;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . exon 4885 5834 . - . ID=g4005.t1.1.5b6be70b.exon5;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . CDS 5228 5834 . - 1 ID=cds.g4005.t1.1.5b6be70b;Parent=g4005.t1.1.5b6be70b NODE_3_length_87188_cov_41.3298 . three_prime_UTR 4885 5227 . - . ID=g4005.t1.1.5b6be70b.utr3p1;Parent=g4005.t1.1.5b6be70b #PROT g4005.t1 g4005 MARPCARLILGVLALSIASVCLVSADVESTEASAGAASNSERSTAGPIYLDTWAIQLKNIAGKELHELDAIAENIAARKNFVNLGRIGSLPGAYHFAPSHLQSATSGVHRRHTREDGHTEALHADDEVEWAEQQHVLSRRKRSVVGISLERDADGINRRQVSFNDPAFGKQWHLYNVGQASGPKGADLNVYPAWNQGFTGKGVVVSVLDDGLEHTNEELKGNYDPHASWDFNDNDNDPLPRYEYSNLNKHGTRCAGEIGAAAKNGNCGVGIAYECKIGGVRMLDGDVSDSVEASSLGFRQDYVDIYSSSWGPDDDGRTVDGPRGLARASFAHGVTNGRGGKGSIFVFASGNGGSYKDNCNCDGYTNSMYTISIGSVTDTNKAPWYTEQCAATMAVTYSSGSNGINHSITTCDFRFGCTDAHSGTSAAAPLAAGVIALGLQANPSLSWRDVQHIVVLTSRVIDESDPKWSKNGAGLSINHKYGFGVMDAAMFVHVAQSWVNVGTQFVYTSPKMQPNMVIPYGGVGAVATVTVPASSGIVKTEHVQVTATIRHRRRGDLAILLTSPSGTISELLTERPYDYSSEGFESWTFMTVRNWNENPQGTWVFAVRDVANEAETGSLVQWQLIVYGTGEGGVVAKATENNNAGVTDDSDSSGDGDSSSGTGFSAKFNFIPLVAVVLVIAGVLLVAGAVVAYRRRTRAGFVPLSTKDADGEHLMPHTLDDDNEDDGERGESRGGLGFANPLIRAANGDEIDYEEEDLLFDASQVR* #PROT g4005.t1.1.5b6be70b g4005 MARPCARLILGVLALSIASVCLVSADVESTEASAGAASNSERSTAGPIYLDTWAIQLKNIAGKELHELDAIAENIAARKNFVNLGRIGSLPGAYHFAPSHLQSATSGVHRRHTREDGHTEALHADDEVEWAEQQHVLSRRKRSVVGISLERDADGINRRQVSFNDPAFGKQWHLYNVGQASGPKGADLNVYPAWNQGFTGKGVVVSVLDDGLEHTNEELKGNYDPHASWDFNDNDNDPLPRYEYSNLNKHGTRCAGEIGAAAKNGNCGVGIAYECKIGGVRMLDGDVSDSVEASSLGFRQDYVDIYSSSWGPDDDGRTVDGPRGLARASFAHGVTNGRGGKGSIFVFASGNGGSYKDNCNCDGYTNSMYTISIGSVTDTNKAPWYTEQCAATMAVTYSSGSNGINHSITTCDFRFGCTDAHSGTSAAAPLAAGVIALGLQANPSLSWRDVQHIVVLTSRVIDESDPKWSKNGAGLSINHKYGFGVMDAAMFVHVAQSWVNVGTQFVYTSPKMQPNMVIPYGGVGAVATVTVPASSGIVKTEHVQVTATIRHRRRGDLAILLTSPSGTISELLTERPYDYSSEGFESWTFMTVRNWNENPQGTWVFAVRDVANEAETGSLVQWQLIVYGTGEGGVVAKGGLSPR* # PASA_UPDATE: g4029.t1, single gene model update, valid-1, status:[pasa:asmbl_6826,status:12], valid-1 NODE_3_length_87188_cov_41.3298 . gene 82793 86627 . - . ID=g4029;Name=g4029.t1 NODE_3_length_87188_cov_41.3298 . mRNA 82793 86627 . - . ID=g4029.t1;Parent=g4029;Name=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 86532 86627 . - . ID=g4029.t1.exon1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 86532 86627 . - 0 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 86245 86376 . - . ID=g4029.t1.exon2;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 86245 86376 . - 0 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 85528 86054 . - . ID=g4029.t1.exon3;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 85528 86054 . - 0 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 85361 85422 . - . ID=g4029.t1.exon4;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 85361 85422 . - 1 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 85022 85181 . - . ID=g4029.t1.exon5;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 85022 85181 . - 2 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 84698 84886 . - . ID=g4029.t1.exon6;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 84698 84886 . - 1 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 84430 84601 . - . ID=g4029.t1.exon7;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 84430 84601 . - 1 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 84133 84313 . - . ID=g4029.t1.exon8;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 84133 84313 . - 0 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 83796 83966 . - . ID=g4029.t1.exon9;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 83796 83966 . - 2 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . exon 82793 83651 . - . ID=g4029.t1.exon10;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . CDS 83506 83651 . - 2 ID=cds.g4029.t1;Parent=g4029.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 82793 83505 . - . ID=g4029.t1.utr3p1;Parent=g4029.t1 #PROT g4029.t1 g4029 MQALPRLQVVYRLPDDRAANPERLNLDRRHLTVCPLLQGESQLRLLNLQHNLIARIENIGSLRNLIFLDLYDNQIERIAGLELLHSLRVLMLGRNRIRRIEGLDVHTKLDVLDLHGNSIKKIGVRRAPCCLVACSQVHVVACCLNAAAAFPLLASSCSAENLGHLSRLRVLNLAGNDLVDVCGIASLFSLAELNLRRNKASVCRHRMIIFQVEFDYFRREYYFMSRDCTGSHWAFCHRTTWMWELEWEWEWGQNRIVDFQSLACLAGSQSLVELSLEGNPVVLDPTCASYLVQTIPTLQLIDSKKVTQLKGVAVAIPLPVPVAQPGPYDAAAYSDPTTDGHGQADAPESQFGGVQQAHQTPAPSGDAGAARRLVRPPPAPFVDAEVLHIHSDAAEAVDRQWSVPISSIVLHVAFAEAMQVLAKVRQRFPSLSSLTLAGSGLDSLVQLHSLAILRRLDELVIGDASSLVHSRLLRPFVVHRLGHLGLARINGRDIGEEDRRAAERLFGGTVQVLLKMSPSRLAAVGVANLPPAALPKSTLDERRPLTDAARVQREAEAENAAREFVHSLCKRSCDVDVRHRKLDALWESIVASRVRLALQDLVSDDAYKLPS* # ORIGINAL: g4022.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 57077 59059 . - . ID=g4022;Name=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 57077 59059 . - . ID=g4022.t1;Parent=g4022;Name=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 58909 59059 . - . ID=g4022.t1.exon1;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 58909 59059 . - 0 ID=cds.g4022.t1;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 58720 58762 . - . ID=g4022.t1.exon2;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 58720 58762 . - 2 ID=cds.g4022.t1;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 58510 58567 . - . ID=g4022.t1.exon3;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 58510 58567 . - 1 ID=cds.g4022.t1;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 58005 58252 . - . ID=g4022.t1.exon4;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 58005 58252 . - 0 ID=cds.g4022.t1;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 57077 57758 . - . ID=g4022.t1.exon5;Parent=g4022.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 57077 57758 . - 1 ID=cds.g4022.t1;Parent=g4022.t1 #PROT g4022.t1 g4022 MVHVASWNVLSGHGTEVDRAPSHSGDSAVELAENDVLTTVTQRTPKEHRRERMNRLAGFGIGLGSLFTHQVACHPFVVLRHQCQAHRYPSGLSPVPCVHVMARIAGAQGTWALWRGFGSDMVCDAAYLAFHGALATQKDAVLRRIAPRGETKMAAAADFAFELLSRGAAFMVALPFYSYSILSMVTSRLSVDSSRLSPAAASVFARPLIYRNGTRLSYAELFFPTATLFIARTSIYGIVERSVRRYFGGFGTADATAASGSGEGDTEKNKQPQCPRPTASRAFFAEVLACFLATLAAQSLLHPLETCVVRLHVQGTRALIDDPLQGRGLVSVSTDYDGLFDCWQEASWGGWGSLYAGAGAVLLQTAVHAAVVKVSHVLFLRLQARLMAKAPAS* # ORIGINAL: g4028.t1 original gene structure, not modified by PASA NODE_3_length_87188_cov_41.3298 AUGUSTUS gene 80149 83363 . + . ID=g4028;Name=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS mRNA 80149 83363 . + . ID=g4028.t1;Parent=g4028;Name=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 80149 80243 . + . ID=g4028.t1.exon1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 80149 80243 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 80430 80490 . + . ID=g4028.t1.exon2;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 80430 80490 . + 1 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 80597 80707 . + . ID=g4028.t1.exon3;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 80597 80707 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 80797 80888 . + . ID=g4028.t1.exon4;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 80797 80888 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 81114 81207 . + . ID=g4028.t1.exon5;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 81114 81207 . + 1 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 81347 81419 . + . ID=g4028.t1.exon6;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 81347 81419 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 81617 81749 . + . ID=g4028.t1.exon7;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 81617 81749 . + 2 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 82020 82149 . + . ID=g4028.t1.exon8;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 82020 82149 . + 1 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 82374 82568 . + . ID=g4028.t1.exon9;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 82374 82568 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 82717 82812 . + . ID=g4028.t1.exon10;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 82717 82812 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS exon 82929 83363 . + . ID=g4028.t1.exon11;Parent=g4028.t1 NODE_3_length_87188_cov_41.3298 AUGUSTUS CDS 82929 83363 . + 0 ID=cds.g4028.t1;Parent=g4028.t1 #PROT g4028.t1 g4028 MGDGSDQPHAHIGAQDLEGLSVAELTGLLAEKILSLLPDHGPLYALLRSFYEVPFYHLVLEGILVILILRLMCARSYSISERRDKLSQKEIDELVADWEPEPLVPPVTNRRDLELPIIDGKVGTHVSINGGDKINLGTFNFLGLIGDADIENSAIKTLRKYGVGSCGPRGFYGTIDVHLDLEQKLAEFMKTEEAIIYSYGFSTIASAIPAYSKRGDVLFCDDGVSFPVQKGIDASRSDVRWFPHNDMQALEKLLIAYEDELKKSKKGRVARTFIIIEGLYANYGDIAPLAKIVELKYKYKVRIFMDESMSFGVLGKTGRGITEHLGVKVTDIDMICASMEASLGSIGGFCCGKTFVIDHQRLSGQGYCFSASLPPILATAAIEGLGRITPQALTTLSARATKLRQRLSTLSQVTLGGAKESPIIHMRLAKSKGSRDADEDALQAVVDAAMAAGVALTRAKYIVGEEQSPPAPSIRITVSAKHTDAELDKAADATIAAVVKVLGN* # PASA_UPDATE: g4023.t1, single gene model update, valid-1, status:[pasa:asmbl_6825,status:3], valid-1 NODE_3_length_87188_cov_41.3298 . gene 59385 63521 . - . ID=g4023;Name=g4023.t1 NODE_3_length_87188_cov_41.3298 . mRNA 59385 63521 . - . ID=g4023.t1;Parent=g4023;Name=g4023.t1 NODE_3_length_87188_cov_41.3298 . five_prime_UTR 63334 63521 . - . ID=g4023.t1.utr5p1;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . exon 62986 63521 . - . ID=g4023.t1.exon1;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . CDS 62986 63333 . - 0 ID=cds.g4023.t1;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . exon 61624 61672 . - . ID=g4023.t1.exon2;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . CDS 61624 61672 . - 0 ID=cds.g4023.t1;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . exon 59385 61390 . - . ID=g4023.t1.exon3;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . CDS 59469 61390 . - 2 ID=cds.g4023.t1;Parent=g4023.t1 NODE_3_length_87188_cov_41.3298 . three_prime_UTR 59385 59468 . - . ID=g4023.t1.utr3p1;Parent=g4023.t1 #PROT g4023.t1 g4023 MFSRLRGWLSRAAAAGSNTLNEDTDADGFVHVQLEDAHHVEVVSCHVMPLCGKLHILEPSLSGAYPLPAVLAEYGRNPISEHVLADGVHCLNPDEVAEDDHTDHAAPSWRRTLIQQLSSRDKLQCLAFAILPDYQPPRRMSEHSEDADTGTLSQRLLDLETRLHKRTKMSRRSIRVMAAVIVFVISIAISLGFALNSVLQSVDSTADTTCAQSSFKISSAQALAAFSALGCVQIDSLSINGSALEATPCPNLAFPTLAAMTGTLTISLWAGNWSTLAFPALAHVGGNLVMQDVTLRSADFSSLSTVNDLVVNGVSVLDGLLFPRLTYASSVRFEDVYTSAIDLSAVAVVSGNLTMRSARSLGDVVFPHLRSAGLVDIQGVLRMDVSDNNPPNMLISFPLLERARGVIIWSVEATAGIHFPRLTEVQFCTFSGVILNQLFAKGESASAILDLSALQRASFMLIRSMTGLTSVSFEKLQSVNSVIMDSNAGLGTVSFPALERAVDLLFMSNAALVNLSIPLLRTATDGLRVVGHPLIASLSAPSLTSGVLLLSLNSGLVNLSFPVMEMGSVVVTGSNRLVSVAFPALVEIGIASFFKNAALTTISMPRARAFGSAGWIQPNGPSALFWVIAQDDVIDAFRLPSEDTVWSVGYCLAGGSLSVYDNRNLTHLDVGALETAGGLLIMRNPLLCPTHVRIPATANITCACAYNGNGNGSPADTMCVVPAPAVPAWCQQAAFATLTSEADSPPVTPALRRRGGLALANSDAMPWLPLAA* # ORIGINAL: g8026.t1 original gene structure, not modified by PASA NODE_1742_length_9449_cov_34.8547 AUGUSTUS gene 92 2866 . + . ID=g8026;Name=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS mRNA 92 2866 . + . ID=g8026.t1;Parent=g8026;Name=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 92 191 . + . ID=g8026.t1.exon1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 92 191 . + 2 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 439 485 . + . ID=g8026.t1.exon2;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 439 485 . + 1 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 673 761 . + . ID=g8026.t1.exon3;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 673 761 . + 2 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 1078 1156 . + . ID=g8026.t1.exon4;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 1078 1156 . + 0 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 1468 1673 . + . ID=g8026.t1.exon5;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 1468 1673 . + 2 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 1865 2271 . + . ID=g8026.t1.exon6;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 1865 2271 . + 0 ID=cds.g8026.t1;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 2461 2866 . + . ID=g8026.t1.exon7;Parent=g8026.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 2461 2866 . + 1 ID=cds.g8026.t1;Parent=g8026.t1 #PROT g8026.t1 g8026 VFYIDWETLCHFFDVIYVSWNPELFKHSFSLHACWSASTGPKKDLYNLGHNPQYTLDLPPMDKPEMIWVLLTKHITDKDDFADNKDFITVHVYKSNQGGRVYYPDDPLIEGVKINSPHYLVKVSAAASKERQRFTLVISQYEKNNTINYTLRAYANAPFTLHPVKEPYTHEHKLTGQWTADSAGGCANWPTFPFNPQFRLCIRGNADEKEDKRAHVMIVLQAPKQYAAGITVARGRDRIEWGSDPNVVECTKKLRHGFVCTTLRMLPGEYAILPSTFNIGDCGAFFLTVKCSHSFELLPMKPEGAGMHRTVVAGSWVSGSSAAGCPNFGAYAKNPTFALTVSKPTRMFLRLTAAATSLPAAATKFPANPPSLNVAVFPGTSVPRNITGEVAESGVYKNPARTPIFDVAPRADGYVVVPSTFDPFEGQFTLIVYSEEPVTLRPL* # ORIGINAL: g8027.t1 original gene structure, not modified by PASA NODE_1742_length_9449_cov_34.8547 AUGUSTUS gene 3333 5998 . - . ID=g8027;Name=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS mRNA 3333 5998 . - . ID=g8027.t1;Parent=g8027;Name=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 5738 5998 . - . ID=g8027.t1.exon1;Parent=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 5738 5998 . - 0 ID=cds.g8027.t1;Parent=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 5280 5420 . - . ID=g8027.t1.exon2;Parent=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 5280 5420 . - 0 ID=cds.g8027.t1;Parent=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS exon 3333 5015 . - . ID=g8027.t1.exon3;Parent=g8027.t1 NODE_1742_length_9449_cov_34.8547 AUGUSTUS CDS 3333 5015 . - 0 ID=cds.g8027.t1;Parent=g8027.t1 #PROT g8027.t1 g8027 MELTRLRNSDGETLENAPRFPTLTDLAVQSILSRANAYEPNSLPELPAALLERLIVGAIERSPIHVRAIVRAWSCALLRVDKAVTVPDAAARMLAISIARNERITHVELWQTTFASEDGSKAFLQLSLGNPITQNVTSAPPAGVRPSSAHFAATHESVRRAVPLQRLVVSGHVSPDAVSTWRAFCADEAALSVLHLWKLDASYGIGVGVLGPLVAQIVPSALRVLTLGRNLLGNEATLLLVRTAHRFPLLEELDLSYNRLGGSGGAEGDRHATELFEQLCVAFSSIPHLKKLRLAGNALSSPRVRSLCNALASHSPNLAFLDLSGSLARDGCLGALAKLFEPSSVCAATLYTLKLKGHSISAGGRTAEAALLLREAGRAGRLRFLAMGYDAVDAAAGHHQRTSDSGEAAADATQRVDNVFAGGVRAAAAQSSYGGVLSCAFGMLRSLVYLDIGGVDDFVGCYRGVGRLVESFAGMPRLLEVRLAPTVGIVLLTGCFKHFVRLHGLPSTCKHAYVDGRKVWLLPHQRSGASSLQLHLDTDATGQHNPHTLSGELDALWRAVQQLEESAAGTLKATAAEYDHAMKAGSSLDWAGHVLALSHPAALKAGMGASRVVEIAVNAVAWPALADLFGSLFAHLRVVSHSSVEFDAHAEDVNGADDDSEGERVRHWRFGGGGATTAVGASGGEYLQLSDMDD* # PASA_UPDATE: g8028.t1, single gene model update, valid-1, status:[pasa:asmbl_2497,status:3], valid-1 NODE_1742_length_9449_cov_34.8547 . gene 6479 9127 . - . ID=g8028;Name=g8028.t1 NODE_1742_length_9449_cov_34.8547 . mRNA 6479 9127 . - . ID=g8028.t1;Parent=g8028;Name=g8028.t1 NODE_1742_length_9449_cov_34.8547 . five_prime_UTR 9068 9127 . - . ID=g8028.t1.utr5p1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 8870 9127 . - . ID=g8028.t1.exon1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 8870 9067 . - 0 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 8390 8674 . - . ID=g8028.t1.exon2;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 8390 8674 . - 0 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 7971 8126 . - . ID=g8028.t1.exon3;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 7971 8126 . - 0 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 7616 7696 . - . ID=g8028.t1.exon4;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 7616 7696 . - 0 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 6878 7367 . - . ID=g8028.t1.exon5;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 6878 7367 . - 0 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . exon 6479 6724 . - . ID=g8028.t1.exon6;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . CDS 6699 6724 . - 2 ID=cds.g8028.t1;Parent=g8028.t1 NODE_1742_length_9449_cov_34.8547 . three_prime_UTR 6479 6698 . - . ID=g8028.t1.utr3p1;Parent=g8028.t1 #PROT g8028.t1 g8028 MRMFMEFNLVEKFRIPYDSLCRFLLTVRKNYRNVTYHNWHHAFNVAHIVFCMIKHANLTRYLSDMEVFALLVAGLCHDLDHRGTNNAFQSVIEHPLARLYSTSTMEHHHFDHSLMILNSEGHNIFSNMGTSDYNAMIRLLEDGILATDLALYFKKRGTFQELIDKATFDGTNVEHRALLKGMVMTASDVSAITKPWRLQRVTAEIVYAEFFEQGDLERKMGRDPPAMMCRDKVHEMPKMQLGFIDFICLPAYKMLSSFDAGLKPLYDGVVDNRRHWEELGKRGEYRMLLPDAEMQHKFLEDNVDFGFDELDFDEPDPYAAKRAKEGGGVQSVAQASTSRPQTPSKLPPLEKKDSVVAAAPAVVEARKASNGTAPSAHQLPPIARTDSQKLSGSKTNIHSASKTGSTASLHK* # ORIGINAL: g2752.t1 original gene structure, not modified by PASA NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS gene 31 470 . - . ID=g2752;Name=g2752.t1 NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS mRNA 31 470 . - . ID=g2752.t1;Parent=g2752;Name=g2752.t1 NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS exon 440 470 . - . ID=g2752.t1.exon1;Parent=g2752.t1 NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS CDS 440 470 . - 0 ID=cds.g2752.t1;Parent=g2752.t1 NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS exon 31 248 . - . ID=g2752.t1.exon2;Parent=g2752.t1 NODE_5919_length_682_cov_42.5535_potentialcontaminant AUGUSTUS CDS 31 248 . - 2 ID=cds.g2752.t1;Parent=g2752.t1 #PROT g2752.t1 g2752 MVYQNPVASSAVGGISGSRYRQTRPTENALLASGGIADTRATARNHRISEYDEPVYSAPVRKGDDAEMYASLVHADAAPKKGE # ORIGINAL: g13912.t1 original gene structure, not modified by PASA NODE_3235_length_3943_cov_48.2236 AUGUSTUS gene 244 2903 . + . ID=g13912;Name=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS mRNA 244 2903 . + . ID=g13912.t1;Parent=g13912;Name=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS exon 244 366 . + . ID=g13912.t1.exon1;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS CDS 244 366 . + 0 ID=cds.g13912.t1;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS exon 525 2345 . + . ID=g13912.t1.exon2;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS CDS 525 2345 . + 0 ID=cds.g13912.t1;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS exon 2624 2806 . + . ID=g13912.t1.exon3;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS CDS 2624 2806 . + 0 ID=cds.g13912.t1;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS exon 2895 2903 . + . ID=g13912.t1.exon4;Parent=g13912.t1 NODE_3235_length_3943_cov_48.2236 AUGUSTUS CDS 2895 2903 . + 0 ID=cds.g13912.t1;Parent=g13912.t1 #PROT g13912.t1 g13912 EGEVFSVIIGYRASTRMKNEVCLVKSRSSSIARELAISYAGDRVAKASAFVLPVPVEWTTEAGEMPSKSLWNGACHNDNIGRSGHMQGKDTTATTPNPVHQYVVPSAAKADNAISDTDTAEASHAMAMACGQCDLAIGQKIKSNANRQALGAPVMDDDGVRLSRTLKFQTKYLPVLPFETGRPTSGVGGKSPLWCSCDVCAAHAKASLRFSSANSSHVLDAVELETNEEGELEEVREFCARPRLSSANMAKFRKSGVLLARHKLFIVAIDGKLLAKIKFGIGIVAEGQSYAAIYARMNLSKNILTLIQKSHDMNVKLVKDRSAADMLSANASRMSAAPEWKRSFSLLLRARDRRQSDPFRALMSAQMRLLRQLEGSTNAAGTSTRKRAGENGSSLAGALTKLLHGKADGNESGDVAASVSGGEEHEAQEVIERTGLFLDPITNRAFNPHDTAIDVHYFTAKDGATVAYRALFAADTAPVAHAGNVRLASRLGSTASANIVIVIGPLLNSYMRPRSAIGLASKMHVNIFMHDQRGHGMSDGPRGDAPKIDTPLKDLRAMIRHVRLNYPTIPLLLVGHGLGASLMLTYAGWEHRDQVDGYAFVAPLLFNAMSEGMRARFCKHSTLWITWRRWASRLTGGHLGHTVVFDTQTVWRSAISLGTATSAEGLFPKHAKRNDPPSPTEVPESLTLNQLAYVMGTTSLAKMFVAVDKPL* # ORIGINAL: g5437.t1 original gene structure, not modified by PASA NODE_3100_length_4322_cov_38.4182 AUGUSTUS gene 739 2696 . + . ID=g5437;Name=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS mRNA 739 2696 . + . ID=g5437.t1;Parent=g5437;Name=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 739 954 . + . ID=g5437.t1.exon1;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 739 954 . + 0 ID=cds.g5437.t1;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 1341 1479 . + . ID=g5437.t1.exon2;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 1341 1479 . + 0 ID=cds.g5437.t1;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 1634 2293 . + . ID=g5437.t1.exon3;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 1634 2293 . + 2 ID=cds.g5437.t1;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 2623 2696 . + . ID=g5437.t1.exon4;Parent=g5437.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 2623 2696 . + 2 ID=cds.g5437.t1;Parent=g5437.t1 #PROT g5437.t1 g5437 MAHNADVNTVIAPVRPSATAVDMPPVAARADIAAPPSISAMDLAAQLNEVRASLHSFENWMKDANHVFQRQQEDMHALRDLVKRQEAVVFAMKSMSNARVAAEKDGDSVSSRDGRRLEGDYVVDAGMRGANSYGSSTRADDAMLGGYGHRHYTVNGGETMPLDPRGASAPHMVLPQIEWYPQGHAHGQAPKLPFFPVAHTPPPPHLFSVPGQGVPVQSQPYTGPQLPYSYPSHPAGYVSSGPQSSQSDMGRGIGVPQGDGVYPYGHGHHLMHAGHGVYGSASFGVHVPATADRDVRAGHPGEQAAPTQTHTQGNLKRSSSDTLGGDHGADAKRRKQSGAGESPDRSAASALTVLAGRQAGQS* # ORIGINAL: g5438.t1 original gene structure, not modified by PASA NODE_3100_length_4322_cov_38.4182 AUGUSTUS gene 3271 4200 . - . ID=g5438;Name=g5438.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS mRNA 3271 4200 . - . ID=g5438.t1;Parent=g5438;Name=g5438.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 4060 4200 . - . ID=g5438.t1.exon1;Parent=g5438.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 4060 4200 . - 0 ID=cds.g5438.t1;Parent=g5438.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS exon 3271 3903 . - . ID=g5438.t1.exon2;Parent=g5438.t1 NODE_3100_length_4322_cov_38.4182 AUGUSTUS CDS 3271 3903 . - 0 ID=cds.g5438.t1;Parent=g5438.t1 #PROT g5438.t1 g5438 MQTASAVWQTVRKKVNEAKGKIDVANTISGPETFGYAYPTIAKLIERLPNAEKCGKYTFKYSRVHSSNAGSTPQPVDSPVGSPSAPPHKAARKKSATPKPPRERKEFPDHLVRQMCEEVDIAPSDSDMGLRSHVPPADMDDDLPDELEEAPGSDVDVEPSPIKSHPRMPHTSFGGDHASSALGAVVVPTPVRASSATVHVEAADATHVTPRDPADIDMMANEELELPDELEEGPGSDVELDEAARVSGHTNEQAMAE* # PASA_UPDATE: g13359.t1, single gene model update, valid-1, status:[pasa:asmbl_2793,status:3], valid-1 NODE_1848_length_8937_cov_41.3311 . gene 2478 4956 . - . ID=g13359;Name=g13359.t1 NODE_1848_length_8937_cov_41.3311 . mRNA 2478 4956 . - . ID=g13359.t1;Parent=g13359;Name=g13359.t1 NODE_1848_length_8937_cov_41.3311 . five_prime_UTR 4807 4956 . - . ID=g13359.t1.utr5p1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . exon 4660 4956 . - . ID=g13359.t1.exon1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . CDS 4660 4806 . - 0 ID=cds.g13359.t1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . exon 3942 4105 . - . ID=g13359.t1.exon2;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . CDS 3942 4105 . - 0 ID=cds.g13359.t1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . exon 3341 3560 . - . ID=g13359.t1.exon3;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . CDS 3341 3560 . - 1 ID=cds.g13359.t1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . exon 2849 3098 . - . ID=g13359.t1.exon4;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . CDS 2901 3098 . - 0 ID=cds.g13359.t1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . exon 2478 2758 . - . ID=g13359.t1.exon5;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . three_prime_UTR 2849 2900 . - . ID=g13359.t1.utr3p1;Parent=g13359.t1 NODE_1848_length_8937_cov_41.3311 . three_prime_UTR 2478 2758 . - . ID=g13359.t1.utr3p2;Parent=g13359.t1 #PROT g13359.t1 g13359 MGDESSARRIKGKGKQEATVFFDMDGTMVPTDMHHAGIYFLLGLPNPIQRIVKLVVFVVGLLVVAVVDAVMGESYSVPLIAWLALKGVSERDAQVAARNVLTPKFRAIIRPAILAEIRRHQREGRRVAVLSGNLRPLISAYCEEIGCDCICTTAELDTVTLTYTGRIVGDPCVREAKVDIVRKITNTTSGIVPGTYGYGNSKNDLFFLKLMEHPFAVTPDSKLRAHSASNGWAPTFLSTAEA* # PASA_UPDATE: g13360.t1, single gene model update, valid-1, status:[pasa:asmbl_2794,status:3], valid-1 NODE_1848_length_8937_cov_41.3311 . gene 5715 8412 . - . ID=g13360;Name=g13360.t1 NODE_1848_length_8937_cov_41.3311 . mRNA 5715 8412 . - . ID=g13360.t1;Parent=g13360;Name=g13360.t1 NODE_1848_length_8937_cov_41.3311 . five_prime_UTR 8293 8412 . - . ID=g13360.t1.utr5p1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . exon 8094 8412 . - . ID=g13360.t1.exon1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . CDS 8094 8292 . - 0 ID=cds.g13360.t1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . exon 7871 7933 . - . ID=g13360.t1.exon2;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . CDS 7871 7933 . - 2 ID=cds.g13360.t1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . exon 7237 7407 . - . ID=g13360.t1.exon3;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . CDS 7237 7407 . - 2 ID=cds.g13360.t1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . exon 6539 6668 . - . ID=g13360.t1.exon4;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . CDS 6539 6668 . - 2 ID=cds.g13360.t1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . exon 5715 6101 . - . ID=g13360.t1.exon5;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . CDS 5921 6101 . - 1 ID=cds.g13360.t1;Parent=g13360.t1 NODE_1848_length_8937_cov_41.3311 . three_prime_UTR 5715 5920 . - . ID=g13360.t1.utr3p1;Parent=g13360.t1 #PROT g13360.t1 g13360 MGTEGFKWKPLSVHLKLAIVFIVTCVALYSAAMGMHSMFVFYTVPGYITPNPNGLTVNLTYFDGEYGLWETCWRNITQEEAYCRGSTTWPITSTMKGKWNAARSMSVLALVSVILAGVLPFLGPNMNIGFKTSYRTVMVLATLGGIFGIISMGIQIQLSDDAWDDYVKSEAAPLTEAQAWYAFALATRGMGTSFNLTVSALSISFFTAILIALAPELRRNAQPSAAVANKNSGGSGGAAELVAVRTN* # ORIGINAL: g2866.t1 original gene structure, not modified by PASA NODE_5152_length_994_cov_49.9891_potentialcontaminant AUGUSTUS gene 1 948 . - . ID=g2866;Name=g2866.t1 NODE_5152_length_994_cov_49.9891_potentialcontaminant AUGUSTUS mRNA 1 948 . - . ID=g2866.t1;Parent=g2866;Name=g2866.t1 NODE_5152_length_994_cov_49.9891_potentialcontaminant AUGUSTUS exon 1 948 . - . ID=g2866.t1.exon1;Parent=g2866.t1 NODE_5152_length_994_cov_49.9891_potentialcontaminant AUGUSTUS CDS 1 948 . - 0 ID=cds.g2866.t1;Parent=g2866.t1 #PROT g2866.t1 g2866 MSGATLLATLSVQDMHDPSAWRVIQRRRMDVRAELAYVPRSDSGIILVTTNALERSVFRAWDDLLANRLGVSYDVFSLTRYGHMDPALPVLADGKLLLDHFRNKIVIVPNVAFNSGTPTQVDMRVPTEFMPGMFVRSALEAEQRPRYVIVGDALGQPEPFACPSLRHLVDPVTPQNGRMKRIGGGDFHRQRDFWAEMARKGSTLPLPDFPNSAREAALQSYLHTAGAVRGLFDAQVTAGVATAAAFNATEASVPTMLSGSAPVDLRNAAEDVHAADPASFYHVISVHTWTLSECCCTGSIYNGKALARVAENFTCR # ORIGINAL: g28.t1 original gene structure, not modified by PASA NODE_286_length_27998_cov_40.4724 AUGUSTUS gene 14667 16137 . + . ID=g28;Name=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS mRNA 14667 16137 . + . ID=g28.t1;Parent=g28;Name=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 14667 14863 . + . ID=g28.t1.exon1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 14667 14863 . + 0 ID=cds.g28.t1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 14975 15011 . + . ID=g28.t1.exon2;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 14975 15011 . + 1 ID=cds.g28.t1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 15177 15302 . + . ID=g28.t1.exon3;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 15177 15302 . + 0 ID=cds.g28.t1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 15449 15608 . + . ID=g28.t1.exon4;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 15449 15608 . + 0 ID=cds.g28.t1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 15778 15853 . + . ID=g28.t1.exon5;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 15778 15853 . + 2 ID=cds.g28.t1;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 15969 16137 . + . ID=g28.t1.exon6;Parent=g28.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 15969 16137 . + 1 ID=cds.g28.t1;Parent=g28.t1 #PROT g28.t1 g28 MRPWSQRRAAARICSASGMIAIVCCGIIISLSMAVTATTGRIEEGPPKLLSKYSIVGSKMFSGDNSVVGGRAFKIVQPCPAVSSCALLGGACLSCTFPNDCTYGLESTANCTVLADIACVGERNFSRQFVCMYCYQLPADSTRCIPRFDCDVRRANGQYYETNCTADPTPICMGRRTFRKNVRCNWTSGKKWSTALALSITLGGFGVDRMYLGYYGWGVFKLLSFGGLGVWTLVDAILIGTGYLTPADGSVYIF* # PASA_UPDATE: g32.t1, single gene model update, valid-1, status:[pasa:asmbl_5149,status:12], valid-1 NODE_286_length_27998_cov_40.4724 . gene 24302 27867 . + . ID=g32;Name=g32.t1 NODE_286_length_27998_cov_40.4724 . mRNA 24302 27867 . + . ID=g32.t1;Parent=g32;Name=g32.t1 NODE_286_length_27998_cov_40.4724 . five_prime_UTR 24302 24399 . + . ID=g32.t1.utr5p1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . five_prime_UTR 24596 24614 . + . ID=g32.t1.utr5p2;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 24302 24399 . + . ID=g32.t1.exon1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 24596 24642 . + . ID=g32.t1.exon2;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 24615 24642 . + 0 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 24830 24961 . + . ID=g32.t1.exon3;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 24830 24961 . + 2 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 25173 25328 . + . ID=g32.t1.exon4;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 25173 25328 . + 2 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 25523 25612 . + . ID=g32.t1.exon5;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 25523 25612 . + 2 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 25802 25908 . + . ID=g32.t1.exon6;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 25802 25908 . + 2 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 26274 26344 . + . ID=g32.t1.exon7;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 26274 26344 . + 0 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 26563 26626 . + . ID=g32.t1.exon8;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 26563 26626 . + 1 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 26905 27035 . + . ID=g32.t1.exon9;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 26905 27035 . + 0 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 27255 27429 . + . ID=g32.t1.exon10;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 27255 27429 . + 1 ID=cds.g32.t1;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . exon 27703 27867 . + . ID=g32.t1.exon11;Parent=g32.t1 NODE_286_length_27998_cov_40.4724 . CDS 27703 27867 . + 0 ID=cds.g32.t1;Parent=g32.t1 #PROT g32.t1 g32 MTIKETARERFINEVVRAVQPASGFKVLVVDRHAMRILSASCRMFDIVDEGVTLVESLELKRKPLVKFDAIYFITPTEKSINHLIEDFDNASRPQYGAVHLFLTSACPDSLFSKISGSNVARFLKTFQEVNIDFLAVESQVYSLDCPQVFHHVYSPVSRAFPDAQRRIAEQIATLCATLQEYPLIRFSDNNDRNRSLAILVQDRIDEYRKNLAYPVGTGKQRATLLIIDRSVDPLSPLLHELTYQAMAYDLLPIENDVYKYVVEINGRLANKEVILSEKDTLWPTIRHLHIADTIREVTTGFKQFTAKSKALKMKGEKITAAELSEALKEMPQHQEEMQKVGESVVDLQTKWLLGFSYVMRSCVAHPAQRGE* # ORIGINAL: g25.t1 original gene structure, not modified by PASA NODE_286_length_27998_cov_40.4724 AUGUSTUS gene 306 974 . - . ID=g25;Name=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS mRNA 306 974 . - . ID=g25.t1;Parent=g25;Name=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 788 974 . - . ID=g25.t1.exon1;Parent=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 788 974 . - 0 ID=cds.g25.t1;Parent=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 584 612 . - . ID=g25.t1.exon2;Parent=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 584 612 . - 2 ID=cds.g25.t1;Parent=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 306 400 . - . ID=g25.t1.exon3;Parent=g25.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 306 400 . - 0 ID=cds.g25.t1;Parent=g25.t1 #PROT g25.t1 g25 MATTRSTRSGRNAPAEEADAGGASSSAVRATEFFAAKQGKVESALLNRGASAGPQSDETKWKELVERSEELKTILRMHWEAKLEANANKLKEGSAEYESLFKE # PASA_UPDATE: g27.t1, single gene model update, valid-1, status:[pasa:asmbl_5145,status:3], valid-1 NODE_286_length_27998_cov_40.4724 . gene 9799 14385 . - . ID=g27;Name=g27.t1 NODE_286_length_27998_cov_40.4724 . mRNA 9799 14385 . - . ID=g27.t1;Parent=g27;Name=g27.t1 NODE_286_length_27998_cov_40.4724 . five_prime_UTR 14000 14385 . - . ID=g27.t1.utr5p1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 13972 14385 . - . ID=g27.t1.exon1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 13972 13999 . - 0 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 13676 13741 . - . ID=g27.t1.exon2;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 13676 13741 . - 2 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 11693 13304 . - . ID=g27.t1.exon3;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 11693 13304 . - 2 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 11232 11484 . - . ID=g27.t1.exon4;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 11232 11484 . - 1 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 10839 11016 . - . ID=g27.t1.exon5;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 10839 11016 . - 0 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . exon 9799 10690 . - . ID=g27.t1.exon6;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . CDS 9939 10690 . - 2 ID=cds.g27.t1;Parent=g27.t1 NODE_286_length_27998_cov_40.4724 . three_prime_UTR 9799 9938 . - . ID=g27.t1.utr3p1;Parent=g27.t1 #PROT g27.t1 g27 MADDSKRLIDGPPRVTKRLSAGLLRLTAFNTAGNSDSGDELPPSSSPKAVKPARRTSANDANPPMRRQSADCPQVPIMKAPLEEYADIVYHVILQRVQHFTPSASESVGHLAYSTQRRKRVKGATIDRLVQNLLPSTTTPDSHYVNVFLVTYRTFTDPDTLLSLVRARFSNPAVAVEALDPACHLADGDVAIEGEGSTAIDTVHLSILTVLTIWVTQYAYDFAGPSGLARLHQVCEFIEGPMRNALPPTQSTGQIEKAVRGLIADKERVLKSVPPPIAPKPGAGAGEAGRPLSMHRQTQSLSSIALFANAAAAGGGGGTGHKRTPSKGDRFAIRSPWDGPLTAADIAAQLTLVEAACFRGIVPFECLGCGWSKKDKLERAPGICASIQQFNRISMLVMTDIIDGTEPILRARSITRFIEIANETRILRNYATLKAVLSGLQSTPVHRLKRSWALVPKEARIIFDELSEIMSEDSNMKRSREVLAASSPPCLPYLGTFLTDLTMIDTANGDFLGDGKTLINFDKRRKEFEIIEAIVWYQKAASFFRMEPNAEFQKFLAFAAARTEDECYRLSLEREPKDVPGMSVPEDSPESIIANMGLIRDRLRKFIASRPNSKRAFIAKHQFLGTVDAPEAEPAVEKPMPTQQRLQLLSEEKDPHGIVLRVSLFNKDSGDYKTLVVPQDATGLDVILLTLEKYNMDVATDGLKLLLMHPNGETTRIHGDVRVGSAIPQGSDSRFVIKEKTWSKGLAGVITGRRKSRHNLVTMRKYPDRDAESSPSPSPAPSGASTPTPPPHVTASYASAGWPVRDAADGSSPSPSPVVGRMLAVDQSTPLKKAQTRMSRSSSLGARSVPPPVPPKPLKVGTVAESHSAPGLGGPQDATRTHTVGDTSAAAVALHPPPAHAGHSAVHTVHQNASGGHITATRAASANASIHANETAASLGTATPTVPAKRPMLPPKPHTTAV* # PASA_UPDATE: g31.t1, single gene model update, valid-1, status:[pasa:asmbl_5148,status:12],[pasa:asmbl_5151,status:12], valid-1 NODE_286_length_27998_cov_40.4724 . gene 22032 23473 . - . ID=g31;Name=g31.t1 NODE_286_length_27998_cov_40.4724 . mRNA 22032 23473 . - . ID=g31.t1;Parent=g31;Name=g31.t1 NODE_286_length_27998_cov_40.4724 . five_prime_UTR 23429 23473 . - . ID=g31.t1.utr5p1;Parent=g31.t1 NODE_286_length_27998_cov_40.4724 . exon 22472 23473 . - . ID=g31.t1.exon1;Parent=g31.t1 NODE_286_length_27998_cov_40.4724 . CDS 22472 23428 . - 0 ID=cds.g31.t1;Parent=g31.t1 NODE_286_length_27998_cov_40.4724 . exon 22032 22356 . - . ID=g31.t1.exon2;Parent=g31.t1 NODE_286_length_27998_cov_40.4724 . CDS 22267 22356 . - 0 ID=cds.g31.t1;Parent=g31.t1 NODE_286_length_27998_cov_40.4724 . three_prime_UTR 22032 22266 . - . ID=g31.t1.utr3p1;Parent=g31.t1 #PROT g31.t1 g31 MVFRGITNMYIRGIPLYKQVYYYFLYTLHLFGLHYYLPFLSTLLKKAVDWMVPDLEKLYGPRTKGPEFKPLEEITAAEYTRLGVEGFKREFLNNNRPVVIRGMNKLPGWRAPTKWSVDFFGKNYPNVECLVYKDAAKRELTKVSASELCNRVKANDAVYGRGINEFFMADKSLLDDLNLEQVIEMRGGWRRNIGNLGGETGFEALLFISGKDTFTQVHADVGTNFNMQIEGKKDWIIFPPEMMPFLYTQPYGTNLFYRSLTNPAKPELETYPAYKYCRGFSITMEAGDLLFLPPMWWHGIINNGVAVGCAMDSFINAGLCLNTHLYLVLGTLLNPFNTRKLVKEDILL* # PASA_UPDATE: g29.t1, single gene model update, valid-1, status:[pasa:asmbl_5146,status:12],[pasa:asmbl_5147,status:12],[pasa:asmbl_5150,status:12], valid-1 NODE_286_length_27998_cov_40.4724 . gene 16270 19404 . - . ID=g29;Name=g29.t1 NODE_286_length_27998_cov_40.4724 . mRNA 16270 19404 . - . ID=g29.t1;Parent=g29;Name=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 19402 19404 . - . ID=g29.t1.exon1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 19402 19404 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 19227 19310 . - . ID=g29.t1.exon2;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 19227 19310 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 18982 19097 . - . ID=g29.t1.exon3;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 18982 19097 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 18695 18850 . - . ID=g29.t1.exon4;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 18695 18850 . - 1 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 18381 18429 . - . ID=g29.t1.exon5;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 18381 18429 . - 1 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 18054 18266 . - . ID=g29.t1.exon6;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 18054 18266 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 17661 17930 . - . ID=g29.t1.exon7;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 17661 17930 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 17088 17522 . - . ID=g29.t1.exon8;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 17088 17522 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 16754 16963 . - . ID=g29.t1.exon9;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 16754 16963 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . exon 16270 16615 . - . ID=g29.t1.exon10;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . CDS 16349 16615 . - 0 ID=cds.g29.t1;Parent=g29.t1 NODE_286_length_27998_cov_40.4724 . three_prime_UTR 16270 16348 . - . ID=g29.t1.utr3p1;Parent=g29.t1 #PROT g29.t1 g29 MTLLRIRSREKTERVEVPNDANVGALLAKVATSFGIPEDQWRLSVKPNGEDVVNACPRAEKLVALNIKHGDMLFLETAARANGSASAASLGEEKTVVEDDVDKQLQKLDGTIRRGKDAHFCKHGANGMCDYCAPLEPYDGKYLESQGIKHMSFHSYLRKLFGGVDKGKFALLEDLDYGVKQGCKGHAPWPEGICSKCQPGAVTLNRQVYRHVDFIEFESPRIVDRFIQYWRQSGGHQRLGYLYGKYAPHADVPLGIKAMVMAIYEPPQDTRADSLELLADPNEEAVDQMAAALGLRRVGWIITDLEDDGTGQGKVRYKRHGESYFLTSAECIMAGDLQTKYPNACALSRTGKFGSKFVSVIVSGHADGGVGIEAYQVSNQCMALTRAGYLLPSRKDLSLGRIKASTPTLYVPDVMYSYKNEYGSDVTVAAKPTFPLDYLIVSVASGAPHEPSPMFDLAPSPFTIENRLAIRENQDMARLRDHLRQNTMFLALVSDFHLLVHFVSNPQFAHVMADLPRLYDAILRRDGSAANAFRLLPSWKAVEGLANSTRSTDPPTTGGRSFAPAPSVAAPVASGPWACQHCTYINITSRDACEMCGLPS* # ORIGINAL: g26.t1 original gene structure, not modified by PASA NODE_286_length_27998_cov_40.4724 AUGUSTUS gene 1648 9071 . + . ID=g26;Name=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS mRNA 1648 9071 . + . ID=g26.t1;Parent=g26;Name=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 1648 1735 . + . ID=g26.t1.exon1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 1648 1735 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 1897 2000 . + . ID=g26.t1.exon2;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 1897 2000 . + 2 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 2295 2366 . + . ID=g26.t1.exon3;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 2295 2366 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 2581 2720 . + . ID=g26.t1.exon4;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 2581 2720 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 2853 2999 . + . ID=g26.t1.exon5;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 2853 2999 . + 1 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 3161 3206 . + . ID=g26.t1.exon6;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 3161 3206 . + 1 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 3418 3630 . + . ID=g26.t1.exon7;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 3418 3630 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 3935 4127 . + . ID=g26.t1.exon8;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 3935 4127 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 4313 4376 . + . ID=g26.t1.exon9;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 4313 4376 . + 2 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 4667 5054 . + . ID=g26.t1.exon10;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 4667 5054 . + 1 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 5324 6421 . + . ID=g26.t1.exon11;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 5324 6421 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 6731 6900 . + . ID=g26.t1.exon12;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 6731 6900 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 7028 7286 . + . ID=g26.t1.exon13;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 7028 7286 . + 1 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 7456 7623 . + . ID=g26.t1.exon14;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 7456 7623 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 8007 8156 . + . ID=g26.t1.exon15;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 8007 8156 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 8428 8568 . + . ID=g26.t1.exon16;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 8428 8568 . + 0 ID=cds.g26.t1;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 8865 9071 . + . ID=g26.t1.exon17;Parent=g26.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 8865 9071 . + 0 ID=cds.g26.t1;Parent=g26.t1 #PROT g26.t1 g26 MGVKGLWQLLDPVGRPINLENLSNKRLAVDVSIWLNQQVKAMRDQHGNMIRNAHLLGLFKRICKLLYWKIKPIFVYDGGAPALKRGTLERRRRQRARAEMDLKKTAERLLSNAVKRHAVAAAAGTRDKGKTPFSGPRRVRDDGDEQFELPPSPTRDLDAASDAESMDWDDDGYDAVAAVLRQVARPPDDSNDSESGDDTGGGSGTKQARGRGVRGRGRAGRTINLLDVDIDSTEFKQLPPEIQHEILAEVRTLKKSTAWQRFDQLRKVAKTADDFSSYQLQGLLQKNQLSRRMDTLKAEMHLTQALAYEGFEARRIACEDGTEYVLCYTGNKKDDDGEEAPLPNIQDALAREGVRSFPSAALPQSARDFGGTEDPHGFNRPLSRHNDAQNDASQMHIASQNDALDDAVPNAHTNPQNRKHVIAFDSDSDDGYNRFNVNMREETGGRTADSDSFDEEDHIVAAIAAAVARENSENERERKEEMHGKDRGVTVAHTATDLDEDEQLALAISLSMQPAGYHVPPQADATAPIAARNTPDGRNAMDASSDSELEISFDKRRNTLAQSVGGASGLGEKTGMTAPPHALLVAADAPKAIDLTSERHNVVRDYDARHKPITKSNSAIITATPPVVAPARDANMSTDMRRDGSDGPDGPDEEAAPPSPPRATGKAALAVISAATAARRLEESGRHVTGNMTAELRNAPASDGAADEQAHGGDIVDVDEGIASVGGAIPTPAPRVASVVDQLAGVGGALGMGGIAALGGVRPYEGAVRLAPPTIPSRTAEAERETTTSPLHAETESAPDVQRAPPPPLAPIDLDAMAGILDREDAELRAERNKGQRDAAIVSNDMYADTQELLRLFGIPYITAPMEAEAQCAAMDAATHCDGVITDDSDAFLFGARRVYRNIFSSTRDPELFFNDEVQSQLGLDRTRLISLAHLLGSDYTDGLKGIGIVTASEIVAEFCADDTQSFGDFVSFCKQAAMDPHSRAGESATRKKLRAWRTPLSLLVPDDFPDLRVNEAYLHPTVELGDNDYEWGMPDLEGIREYPHERTLCSAQRSMHDFFRPVGALTANNAPSLTSPMTTVGTLGTNKKIASKRLASAIQGFKRAGMTACEALDQSRKKRQRTADADEGGAAKQSKRGRGRGTIAAARGRGSTAEPTVAVSETGATPAADVQATGRGRGRGRGRVQGNRGKSNSNARNQGLSSSGTSSDDGSMSD* # ORIGINAL: g30.t1 original gene structure, not modified by PASA NODE_286_length_27998_cov_40.4724 AUGUSTUS gene 20421 22012 . + . ID=g30;Name=g30.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS mRNA 20421 22012 . + . ID=g30.t1;Parent=g30;Name=g30.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 20421 21227 . + . ID=g30.t1.exon1;Parent=g30.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 20421 21227 . + 0 ID=cds.g30.t1;Parent=g30.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS exon 21371 22012 . + . ID=g30.t1.exon2;Parent=g30.t1 NODE_286_length_27998_cov_40.4724 AUGUSTUS CDS 21371 22012 . + 0 ID=cds.g30.t1;Parent=g30.t1 #PROT g30.t1 g30 MLWNEASRIVRFGGNTILRFKTPLLALLLGCALIYINLLTVRIEELEQLVRKCGQGALVSGLQSASTAGQPATMDRRVRGLNSSLVFRPPTGDSVPLWESFDDSFVFDPTIPHYRWKGDMKREKQQIVSVASDAIQRQIEMASPLDAIISRYVKYKIVHGIRRVDRFAGAEYVIDLAADIKTGTRERTRELDPTSTYRVHMVRPFSEVVSVGVSTWQNFPNKTVNIILPVSGRIEQLKRFLSMLNNATRNDHNVRLGVVLFQDSATHEEAVDILNKFHTSNNRNFKLIRVVVVHSKFSRSMGLTLGSGLVEDNDIMFFSDVDMHITPDFFQRCRSYPQKGKSVYFPVVFSLYEGEAPEIKTNSGFWRTPGYGMSCMYRSDFNKIGKFGSKRYEGWGGEDVDLYDRFAQHRYSIVRTLEPGVFHLWHEVPGCERIKNAKNRQDCLSAKYTTLGNNYRLGAAMVDYKTKYETLLRQKAEEGAAP* # PASA_UPDATE: g9483.t1, single gene model update, valid-1, status:[pasa:asmbl_4659,status:12], valid-1 NODE_2615_length_5651_cov_36.8578 . gene 4235 5651 . + . ID=g9483;Name=g9483.t1 NODE_2615_length_5651_cov_36.8578 . mRNA 4235 5651 . + . ID=g9483.t1;Parent=g9483;Name=g9483.t1 NODE_2615_length_5651_cov_36.8578 . five_prime_UTR 4235 4530 . + . ID=g9483.t1.utr5p1;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . five_prime_UTR 4681 4736 . + . ID=g9483.t1.utr5p2;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . exon 4235 4530 . + . ID=g9483.t1.exon1;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . exon 4681 4759 . + . ID=g9483.t1.exon2;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . CDS 4737 4759 . + 0 ID=cds.g9483.t1;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . exon 4948 5651 . + . ID=g9483.t1.exon3;Parent=g9483.t1 NODE_2615_length_5651_cov_36.8578 . CDS 4948 5651 . + 1 ID=cds.g9483.t1;Parent=g9483.t1;3_prime_partial=true #PROT g9483.t1 g9483 MGLSDDSAFKRRTQYLAECNIVRAAAFVGTKDNNPTKETRTLLLTEEPRTAISQRPNKLSARIKRMLRITDENADLSIDLTVNRFDHLKLTMAPGADEDAVFCAWERALEIMVQYPPDVETVCAPEFPIHSLKAMPLTDAFLASAGLIHAVMPFTRSGNSGISPRASRNSSSISLGSFAIRMRPAISHFYWRKWRPSPVQRIAITRTRRKWGACWGCAWRLLYGTSQLSSQRSSCARCVCLD # PASA_UPDATE: g9482.t1, single gene model update, valid-1, status:[pasa:asmbl_4660,status:3], valid-1 NODE_2615_length_5651_cov_36.8578 . gene 395 3988 . - . ID=g9482;Name=g9482.t1 NODE_2615_length_5651_cov_36.8578 . mRNA 395 3988 . - . ID=g9482.t1;Parent=g9482;Name=g9482.t1 NODE_2615_length_5651_cov_36.8578 . five_prime_UTR 3815 3988 . - . ID=g9482.t1.utr5p1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 3658 3988 . - . ID=g9482.t1.exon1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 3658 3814 . - 0 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 3317 3449 . - . ID=g9482.t1.exon2;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 3317 3449 . - 2 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 3075 3166 . - . ID=g9482.t1.exon3;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 3075 3166 . - 1 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 2645 2748 . - . ID=g9482.t1.exon4;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 2645 2748 . - 2 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 1936 2058 . - . ID=g9482.t1.exon5;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 1936 2058 . - 0 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 1267 1496 . - . ID=g9482.t1.exon6;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 1267 1496 . - 0 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 860 997 . - . ID=g9482.t1.exon7;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 860 997 . - 1 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . exon 395 592 . - . ID=g9482.t1.exon8;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . CDS 454 592 . - 1 ID=cds.g9482.t1;Parent=g9482.t1 NODE_2615_length_5651_cov_36.8578 . three_prime_UTR 395 453 . - . ID=g9482.t1.utr3p1;Parent=g9482.t1 #PROT g9482.t1 g9482 MADSEAKAGAAVEAGNTDTPSPPRKPKVEKGVADVNEKDPIHPAIKPKRNAFGNVLPPGSVKSFSLPPRKVAVKRLFVTVNPFGGSNRGLHILKKIRPIFEEAGVAVDVTETQYAGHNFDLAKTCDIDKYDAFCVLGGDGSIHEVINGMMNREDGRRIPIGLVPAGTGNSFAEDFGQPKPIDAARRIVAGMAQKVDVARVIFKEKTLYAFNILNWPADYMKRAESMRWAGAARYKIATGLDVLGGKFGRHVRLEIDGETIEDYIMMLHVQNNQHTGKALRAAPMARIDDGLFDLVLIRGMGRTEMAGMLGGIEDGTWIFHERAEYRRFQSLTLRVTDQPSVVNVDGEICCTEPVTIEVVAGALEIFGPNDC* # PASA_UPDATE: g3642.t1, single gene model update, valid-1, status:[pasa:asmbl_8600,status:12], valid-1 NODE_6365_length_583_cov_45.815 . gene 109 577 . + . ID=g3642;Name=g3642.t1 NODE_6365_length_583_cov_45.815 . mRNA 109 577 . + . ID=g3642.t1;Parent=g3642;Name=g3642.t1 NODE_6365_length_583_cov_45.815 . five_prime_UTR 109 111 . + . ID=g3642.t1.utr5p1;Parent=g3642.t1 NODE_6365_length_583_cov_45.815 . exon 109 167 . + . ID=g3642.t1.exon1;Parent=g3642.t1 NODE_6365_length_583_cov_45.815 . CDS 112 167 . + 0 ID=cds.g3642.t1;Parent=g3642.t1 NODE_6365_length_583_cov_45.815 . exon 273 577 . + . ID=g3642.t1.exon2;Parent=g3642.t1 NODE_6365_length_583_cov_45.815 . CDS 273 480 . + 1 ID=cds.g3642.t1;Parent=g3642.t1 NODE_6365_length_583_cov_45.815 . three_prime_UTR 481 577 . + . ID=g3642.t1.utr3p1;Parent=g3642.t1 #PROT g3642.t1 g3642 MAFATYVLVVGLSLGTSSTFSPEALGITASSALMWLCVEVLAMYLGFYLLNISADIHMFDLFAFCGYKFVGWVSSFSAQSNLASHRL* # ORIGINAL: g6415.t1 original gene structure, not modified by PASA NODE_2738_length_5277_cov_32.9004 AUGUSTUS gene 77 367 . + . ID=g6415;Name=g6415.t1 NODE_2738_length_5277_cov_32.9004 AUGUSTUS mRNA 77 367 . + . ID=g6415.t1;Parent=g6415;Name=g6415.t1 NODE_2738_length_5277_cov_32.9004 AUGUSTUS exon 77 367 . + . ID=g6415.t1.exon1;Parent=g6415.t1 NODE_2738_length_5277_cov_32.9004 AUGUSTUS CDS 77 367 . + 0 ID=cds.g6415.t1;Parent=g6415.t1 #PROT g6415.t1 g6415 MCRSCKNSAGQSCAHGSCRKCCKSHCIALSVDCEGHNFRRSGLKREPHKQVEGTGSTLHPAQLSADPCAHPPAADHVTAPQADSSAPAGMEPAASV* # PASA_UPDATE: g6416.t1, single gene model update, valid-1, status:[pasa:asmbl_4914,status:12], valid-1 NODE_2738_length_5277_cov_32.9004 . gene 1265 5021 . + . ID=g6416;Name=g6416.t1 NODE_2738_length_5277_cov_32.9004 . mRNA 1265 5021 . + . ID=g6416.t1;Parent=g6416;Name=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 1265 1620 . + . ID=g6416.t1.exon1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 1265 1620 . + 0 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 2036 2161 . + . ID=g6416.t1.exon2;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 2036 2161 . + 1 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 2538 2765 . + . ID=g6416.t1.exon3;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 2538 2765 . + 1 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 2910 3181 . + . ID=g6416.t1.exon4;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 2910 3181 . + 1 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 3606 3947 . + . ID=g6416.t1.exon5;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 3606 3947 . + 2 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 4253 4474 . + . ID=g6416.t1.exon6;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 4253 4474 . + 2 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 4669 4749 . + . ID=g6416.t1.exon7;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 4669 4749 . + 2 ID=cds.g6416.t1;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . exon 4918 5021 . + . ID=g6416.t1.exon8;Parent=g6416.t1 NODE_2738_length_5277_cov_32.9004 . CDS 4918 5021 . + 2 ID=cds.g6416.t1;Parent=g6416.t1;3_prime_partial=true #PROT g6416.t1 g6416 MSSTRGGGGGGHEGREGWIPSRDFVALEDYQATAAGVLSFREGERLTAVRDHDEHWYEGVNASGAVGYFPKNFVRAVPPGQRRPSVDASAGDVSQSQGVDNRQYERRVSINPDEITKFKWYFGVMDRPEADALLKTNACVDGTFLVRESAAKPGLFSLSLRCGGGSVKHFKVIEHAKGFSLGTGDGLSFSTIADLVAHYAREAIDAKMGRLRYVCPRPVTSPAEAAIVEAVEPTADVASAPAVSTTTNAPAPAQQEAHVPSNTAQPRGTAAQPVASSPGASRDDVRSRDAVDADANIVRAVASQVQKLSVSIDPDNYVPAEPCPTLDVGHFDPCDELLQVLRRKTGLSHDKCVAAVQVVAAHIARRDPQLLMPVRLVVSQAVGTSLAGQSAAGSTLDRDRLRVIFAEIKHCKDDFNQRDWSVYDDSDIISEYLDELLAILENANPEISRACIREHAFDAVESIVAYYQMETRGPLRVLLLQVLGTIGTLDRRGLSLLLSSVMPIEIARDISNDAKDVRKMLFSFALASMIFSTGEPVPISVYDFWNAEFINLLFDYVDESPDGDQDSPIPDSAMSAL # PASA_UPDATE: g11933.t1, single gene model update, valid-1, status:[pasa:asmbl_3508,status:12], valid-1 NODE_20_length_64004_cov_41.6849 . gene 12061 15463 . + . ID=g11933;Name=g11933.t1 NODE_20_length_64004_cov_41.6849 . mRNA 12061 15463 . + . ID=g11933.t1;Parent=g11933;Name=g11933.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 12061 12110 . + . ID=g11933.t1.utr5p1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 12061 12467 . + . ID=g11933.t1.exon1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 12111 12467 . + 0 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 12672 13127 . + . ID=g11933.t1.exon2;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 12672 13127 . + 0 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 13230 13582 . + . ID=g11933.t1.exon3;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 13230 13582 . + 0 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 13749 14124 . + . ID=g11933.t1.exon4;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 13749 14124 . + 1 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 14286 14325 . + . ID=g11933.t1.exon5;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 14286 14325 . + 0 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 14454 14806 . + . ID=g11933.t1.exon6;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 14454 14806 . + 2 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . exon 14952 15463 . + . ID=g11933.t1.exon7;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . CDS 14952 15404 . + 0 ID=cds.g11933.t1;Parent=g11933.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 15405 15463 . + . ID=g11933.t1.utr3p1;Parent=g11933.t1 #PROT g11933.t1 g11933 MEMTAGLGTRGASTPTTGIRADGASPSPDPKRFAALLRPSPGRPRPVPIICHDETHEAPRATTGNASSRPNAWSPTHAKVTGTSATAADSIFLSPTVSRYTRSPVPSRSNRSPSPVERQAKLDYVRSVLQTVGHENEHLVAKVRQLESETAERVRTLEERLADAERASTTAREEAAQLKKQLKLAANDRGRGDAPSATAASGVGVSAGKEYGDASNGMAIHASSGSQFVDAKGSQNVRAQNGQFDAEGMRREADMHRRQYSPAREKTHNVQVQVPDRERHRTRTKYNDAEEDVEDDMSTEETMDPFPAYASGTSRGLAHGPRARGSAGAGIDYVLEGGSKARLRDVLVYYKLQIQRREEEMRELNAEAEEIRHRLGVYYHSPRSDSHWRSFGVDVDPTRALAAEDDDAFFDRLGHFANSVGGGRRVGGTPMHHQQQQQHQVRQKGDAVKPAMSAGVGGRAGRGATDAADNVSHAQRQRRDAVRAAVEGSIDKPSLSTAASVRTSERRKGAPRLQGEEGISEDFFDDYENVDESVGAVRFDGPRERAVHGGGRAPLEPAGATPHGSGHTPGVGGHHVRNSARAVHVPISVLKAQGKGSISKASYHSRQACGHGDLEHGMCFLDTSAPFIPRGKGHVQHPQWRIIDKIKRSDEVDRLVAQMQYDFEIQGLEMPMQKISDCCYVMHSNRRVYLTSVAGRLAVRSAGGGGCEDFVRFLKRNWSKYVIKLTRKPTSRSAGADDGANSPNVRSRLEAGPKLALSPGEMGAASFSRVTESGAGVPIGGYGLSGGDWYYNESA* # PASA_UPDATE: g11931.t1, single gene model update, valid-1, status:[pasa:asmbl_3507,status:3], valid-1 NODE_20_length_64004_cov_41.6849 . gene 7551 10727 . + . ID=g11931;Name=g11931.t1 NODE_20_length_64004_cov_41.6849 . mRNA 7551 10727 . + . ID=g11931.t1;Parent=g11931;Name=g11931.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 7551 7606 . + . ID=g11931.t1.utr5p1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 7551 7640 . + . ID=g11931.t1.exon1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 7607 7640 . + 0 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 7760 7790 . + . ID=g11931.t1.exon2;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 7760 7790 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 7892 7941 . + . ID=g11931.t1.exon3;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 7892 7941 . + 1 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 8087 8157 . + . ID=g11931.t1.exon4;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 8087 8157 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 8405 8467 . + . ID=g11931.t1.exon5;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 8405 8467 . + 0 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 8610 8664 . + . ID=g11931.t1.exon6;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 8610 8664 . + 0 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 8836 8968 . + . ID=g11931.t1.exon7;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 8836 8968 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 9189 9288 . + . ID=g11931.t1.exon8;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 9189 9288 . + 1 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 9424 9454 . + . ID=g11931.t1.exon9;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 9424 9454 . + 0 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 9662 9834 . + . ID=g11931.t1.exon10;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 9662 9834 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 9986 10046 . + . ID=g11931.t1.exon11;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 9986 10046 . + 0 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 10248 10346 . + . ID=g11931.t1.exon12;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 10248 10346 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . exon 10568 10727 . + . ID=g11931.t1.exon13;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . CDS 10568 10623 . + 2 ID=cds.g11931.t1;Parent=g11931.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 10624 10727 . + . ID=g11931.t1.utr3p1;Parent=g11931.t1 #PROT g11931.t1 g11931 MMCLRKLPLRLGAQRVRLMGTSGPTTDRTERLRRTLLNVPGSDLKKIVKATSLPADSIVLDLEDGVSINLKEVARKTVVEALQNQDFGKAERCVRINGIRSGMAFEDLLVVLRSPRLQGIVIPKVESASDIHTVCELINSVAPEESRQEIRLLAAIETAVGLVNLKEIASAHGRLDALIFASEDLCADMGMVRTPEATELLYARSAICTHAKAFGLQAIDLTCIDYKDDALLRKESKEGFNLGYTGKQAIHPNQLAIINTCFSPSAADVTRARRIIDGFSEAQSKGHGVFSLDGKSIDLPVVKWAEKIVARAKAAGQI* # PASA_UPDATE: g11941.t1, single gene model update, valid-1, status:[pasa:asmbl_3517,status:12], valid-1 NODE_20_length_64004_cov_41.6849 . gene 48503 49579 . - . ID=g11941;Name=g11941.t1 NODE_20_length_64004_cov_41.6849 . mRNA 48503 49579 . - . ID=g11941.t1;Parent=g11941;Name=g11941.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 49433 49579 . - . ID=g11941.t1.utr5p1;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 49201 49226 . - . ID=g11941.t1.utr5p2;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . exon 49433 49579 . - . ID=g11941.t1.exon1;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . exon 49129 49226 . - . ID=g11941.t1.exon2;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . CDS 49129 49200 . - 0 ID=cds.g11941.t1;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . exon 48918 49003 . - . ID=g11941.t1.exon3;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . CDS 48918 49003 . - 0 ID=cds.g11941.t1;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . exon 48503 48779 . - . ID=g11941.t1.exon4;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . CDS 48635 48779 . - 1 ID=cds.g11941.t1;Parent=g11941.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 48503 48634 . - . ID=g11941.t1.utr3p1;Parent=g11941.t1 #PROT g11941.t1 g11941 MQSAGKLLGSELKLLIRNAGQEIETIPLGACVFGALALGGFMIGHSLRKNDVVLQHHKDPFPWQHQIAHHGLPPHTVVIKDPDVSLKTSQPDKVHHADSS* # PASA_UPDATE: g11935.t1, single gene model update, valid-1, status:[pasa:asmbl_3510,status:12],[pasa:asmbl_3515,status:12], valid-1 NODE_20_length_64004_cov_41.6849 . gene 26263 30465 . - . ID=g11935;Name=g11935.t1 NODE_20_length_64004_cov_41.6849 . mRNA 26263 30465 . - . ID=g11935.t1;Parent=g11935;Name=g11935.t1 NODE_20_length_64004_cov_41.6849 . exon 28964 30465 . - . ID=g11935.t1.exon1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . CDS 28964 30465 . - 0 ID=cds.g11935.t1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . exon 28755 28830 . - . ID=g11935.t1.exon2;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . CDS 28755 28830 . - 1 ID=cds.g11935.t1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . exon 28468 28600 . - . ID=g11935.t1.exon3;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . CDS 28468 28600 . - 0 ID=cds.g11935.t1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . exon 28141 28238 . - . ID=g11935.t1.exon4;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . CDS 28141 28238 . - 2 ID=cds.g11935.t1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . exon 26263 27995 . - . ID=g11935.t1.exon5;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . CDS 26340 27995 . - 0 ID=cds.g11935.t1;Parent=g11935.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 26263 26339 . - . ID=g11935.t1.utr3p1;Parent=g11935.t1 #PROT g11935.t1 g11935 MADDEDSGDVPADSLLRPKTQTGSAASSQHSSFETLASDPFGSARNRSGSLFVGSPNYPDSFAPSPSKRLSYGFAAPGSQNTHALLTLAAAAASAVASRDEDVSAELQAHTNDRHEGDGNADASDTDHAIRENAPLLKVDSEIITAFGPTSSLLNTSLTAGFHASPGKRTGANVLAAAAVAAMAAEDVVTASAVGATSAPKSREDDAERESTGREEQQAALPLSIPPKSHRVAALIDDDEESAGPVSPLMKRKSLYKTLVASLQERRDSMKPLDFPKANSPLSALGDMLSVDMGPPVMDTPLGGSLADLSLAGVEQPPSAMSELAEKKSNAMDKLRKMVLISKAAESVQKQAQAKRDNETVVKIEKSSLASEFNVSTFKARGTFAISSQCKKALVTHPRQRSEAELECLHAVVSRLPICQKYTKNVRDELCKIIQYQDVGPRRTVSRQGDPATSFFFILSGACDVNSESITLHGTKLSQHLSEMEPGDFFGENALLTDERREVTILTKEHTEFIRIDKDDFRYVLQITNEKAAAEKHAFLSQIPLFASLHKTDIRRMSTSLMMNEYKPNKLIIKEGAHPEYFYIIKSGKCEVIKEMTFEAVAENGQQSTVTHLVSLRCLNPGDFFGEIAMMNQCPHTASVISVANVECLLMNKLDFLTTIRNKALDILRQHAVGYPSDDAIRECIYRRQGWSIFKKRVVNNVLEQKTVRRQTSESAFREKGSALNTPSTPGDTMRLVRTGTSADNDGPGGADKDTPGKHTHTSRPPPRPSSTSMLINGFPSRAESEMLVRMRAESSMATALEKAEHEEQMRLERRANRQRQLLAQQSVSESLMAPSFRARSQMSMQHSSSAKLTTHHSRQGKRPKTAAPRMEHDEVEGESGKDDEDARDETESPPSSAGGPPPPSSSSTRKGLGLRERRAVSANYATLSAANLAKSGKFGAAPPTSSAHVPSAAALAKHNGIHEMRSKSKDGPLAGAAMLHASMSGQPPSALRVGGAHLPPKPVMRRRVSVTSQAADYEATESGSDVQVPLYATGRSSRGPNSKALEIHMIVEQLRQPPMFTEKKKPPMLTSSQTDFSRLSMPSGGANGAPVLSGTTTANIAGMTVAQRRISVFPMTRPKGFDADEGRLALVKELAQIVSDFQTKKRRLRVSYM* # ORIGINAL: g11942.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 50230 54026 . - . ID=g11942;Name=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 50230 54026 . - . ID=g11942.t1;Parent=g11942;Name=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 53967 54026 . - . ID=g11942.t1.exon1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 53967 54026 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 53628 53711 . - . ID=g11942.t1.exon2;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 53628 53711 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 53377 53538 . - . ID=g11942.t1.exon3;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 53377 53538 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 53042 53215 . - . ID=g11942.t1.exon4;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 53042 53215 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 52653 52747 . - . ID=g11942.t1.exon5;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 52653 52747 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 52369 52534 . - . ID=g11942.t1.exon6;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 52369 52534 . - 1 ID=cds.g11942.t1;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 50230 52230 . - . ID=g11942.t1.exon7;Parent=g11942.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 50230 52230 . - 0 ID=cds.g11942.t1;Parent=g11942.t1 #PROT g11942.t1 g11942 MASTNAGGLSARAEPFMKLQMLLKKEKLFVNAEKTAIRELYLDINSLTERLMQQSWAAQQLSRTLDLVLNNKMTIEDWEKERENYTEPHFVSSHARLGSHAMYYEEFVRCLKDNPKSLARCLISSARESDIDIIVHAVLFKIYGNFFVPDEEKAVLSLLQVILERTLAGVDNMKIVLRTTSLLTRMFAVYSRSYCAGKMYLLAALHGPIMEILSDCDMSLEIDPRRVLAELPAVQRSALLGGIPLDQVDSQSQGEAWLLERPGVRELLSEAYEHLSSNCKAIVDGLISHSSSIPYGVRYLAKLLLKAAEERGLSEDDANGLLFDFFLLRFVNPAIVNPEPFGVVTDVPILAPARRNLTLVAKVLHALGRSGSREPQLAPVVERLRELGQSLSKLFRSLCDVRSPEEALGYLPGILQHKGRKRTILLSPRELHVLQFTITTAMTHGVAPQGRTGDSDPIFAICRRLPPLPSGNSATTGTLHGHPTPRGDVLGVGAAGTDDCHAIVFCVEHVTEAALMSESEVLAKTRASAGGSHVTKGASTGSTVAKASSATPVSELVGDNSLDDAKRKLRLALCGMDFSHQFHSRTLGEILALELAEALALGNRGLASHIQECVRSLSRLPIESVADDCARLRLCMENEYKERSSYVTYLVKCKQNLLVTQSILRRQVDRVTRERRVCGEYMGSLRARRLLERHEAEFDDFCRQFGDPSAMPDEKEMIVRVFLQDMADAARVDPLFASASDSELADCGRRVEQQVMAAVYESAFFPNGEIDAQRDELFSQHIRDTAVYVAVAHESLQIRRELQAEAPWPAAQRHLARLGAYKSPADKVECVMSCCHTIVDLVQLSGSTAGADELFPILVFTILQSNPPHLLSTVQYVKYFHEQRLEGEASYWWSQFAIAVEFIKTIHKSGGDV* # PASA_UPDATE: g11937.t1, single gene model update, valid-1, status:[pasa:asmbl_3516,status:3], valid-1 NODE_20_length_64004_cov_41.6849 . gene 33179 38687 . - . ID=g11937;Name=g11937.t1 NODE_20_length_64004_cov_41.6849 . mRNA 33179 38687 . - . ID=g11937.t1;Parent=g11937;Name=g11937.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 38267 38687 . - . ID=g11937.t1.utr5p1;Parent=g11937.t1 NODE_20_length_64004_cov_41.6849 . exon 36143 38687 . - . ID=g11937.t1.exon1;Parent=g11937.t1 NODE_20_length_64004_cov_41.6849 . CDS 36143 38266 . - 0 ID=cds.g11937.t1;Parent=g11937.t1 NODE_20_length_64004_cov_41.6849 . exon 33179 35939 . - . ID=g11937.t1.exon2;Parent=g11937.t1 NODE_20_length_64004_cov_41.6849 . CDS 33600 35939 . - 0 ID=cds.g11937.t1;Parent=g11937.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 33179 33599 . - . ID=g11937.t1.utr3p1;Parent=g11937.t1 #PROT g11937.t1 g11937 MSRSVPKMPAATFAIVCVFLAGFAAGDINANSYVNWWDVSLANGTLVVDTQNVHNGTLVGAVIAPGSTFTDEIPAIKSNSDAQYARFTLTPEPQYPTPQFSVSFWFRADTLEWMQTPNARRTLLAHGIWPNTIDVHLIADPNNTAILRLRTVYRVDALSFPVEIIPGEWYMYVLAVDTALGTASAYLNGTAMFEKRPLSFFGRSFTGMAGNLAWGGRETTTQYTSSTGQAIPTGTVYLRDLKIRRIALCNEQVSALFPLDTKDIALQDVNCTAPAAPAPPAFNVHFVRIQQPTLQVAMVLAGIAPTQPYDGRLFFASISAATAFSGNDMIMVGPGTYVDAVGSAHVGTKTSFSIISEQGQGSTFWECPAGTTILLSLTVNSVNALVRGITIRKCNNRVDQPVIQVVSATLTMESCTLANISNPVGVSAMLVRLSTLTMRDCTAVNVLGPVPGFIFRFSAVTIENSRFLDSGNNAVVAVYFGLFDIRQQNSIVFSNTSITNCATSGQPVILMALRDVTDVAGPSMITFTNGCAIRQNKAISAAAFIHSEKGNATFVNSFLEDNSAGDHVILYFAKDTVLSFYNSTIRRNSAGRSGPIQVREQSTLIVRSSSFTNNTARANGGAIYAQEGAVISMQDSVCANNMAGNLGGCFHADTSVSLAILRSTFTNNKATSGGAISLMDGASATLTSCTIDKNNVLDVGGAVVLQGRAIFNATSTVIVNNVARHDAGAILANIVTGVPSIANVALTDSVLSNNTCSDSSGALFAKGQAVVLFRRTRVEFNVAKVNGGAARISDQCIALFDRTVFAHNTASVSGGALYLDTASLTTTTNSSFESNKAAFGGAVAITMLQEITAGAFIASSTAFKNNEAKTSGGAISQDNGYLTLTNATFTENIANRPDIETAVLAVQTVAEQDGGGAVYSTLSSVFSFFTASNSSFIDNTANRGVGGAVLLYHSPGAVRAVFTHCVLTGNLAAMGASLHIENPRTPAISLVGSVVEGNVAQLAGVNGDRPTTGIHSVSFSLASAPVVYSGQTLSGFSAATFDAYGPSFSDGDLFQVALIRAGGDFALFKLHGDTLKASTRGNVQFSDLNVHGIPGDYILSVNLLADPSVSSQVGVTVLPCPDDKNHAVENDSDGVPVCHAFRTNYERNQGLLIAVAVLCGLGICMALSFYGALLYFHDDRIVKASQPRFLYVLVLGALVAYVGLILDMPSPTDSYCIAQNWLWHISFALIYTPLFTKTWRVKKIFTNKDLTLKLNLSDRHLMLFVGASLAAVCIVLAVWTGLRPQFVQVVDDATNPLLQYSECSVNIGWTAITWAVEGIFVLWGCILAYETRSIPDNFNESRFLAFAVWNYFVINMVVLPISLVITHNPNAQFVLRSLSLFLTPTMVLCVYFIPRFSSILGERLVKQDIDVSEVRYMGTSKQGRNTSVSSMGRTYSTSSDKQATSESRDSGIGNGSANGHAKKADDIEIHQVTSIAVDIIPEVDDES* # ORIGINAL: g11938.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 40219 41064 . + . ID=g11938;Name=g11938.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 40219 41064 . + . ID=g11938.t1;Parent=g11938;Name=g11938.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 40219 41064 . + . ID=g11938.t1.exon1;Parent=g11938.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 40219 41064 . + 0 ID=cds.g11938.t1;Parent=g11938.t1 #PROT g11938.t1 g11938 MGRFLFIAFTSILGATLAMSSTPAPVTSNLLTWLDPTAPNAYILSQNGTRISQWSDQSPFGRHFVQNNPAKQPAIVSLGARTRRDGDPCDYCGPDFGNGTSMIGSGGTIGSSPYRRRRASSMFTIPTAHLFVVSAGASMTDILFSESLFRVASPNGRNFVDVGHVEFAGGLGSAFAVSLNSVANAATAAASSSTRKDGALDVWAISVQPQMGWATRVSIYKNNAFLSSSVLSGTPPYGLTNAILGSNYSGVVAELMIYADMSNDGRAATSLFLCNKHHITC* # ORIGINAL: g11930.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 5014 7215 . - . ID=g11930;Name=g11930.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 5014 7215 . - . ID=g11930.t1;Parent=g11930;Name=g11930.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 5014 7215 . - . ID=g11930.t1.exon1;Parent=g11930.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 5014 7215 . - 0 ID=cds.g11930.t1;Parent=g11930.t1 #PROT g11930.t1 g11930 MAHVGVAVRALRLAVLLATLAAIAQTREFGSTKLRTSKIRAPVAKPDAFHKAGKDFCVAALALADTGDATAQYYAATCSEAGLFTKQDDAAAIAWYVKAADQGHVQAMLALGFRFATGNGVDQDDEAAVSYFQEAGDSGNEVADIVLRAYDFADEDDLSKDAAAEIEEESAAAGEVDELEKLEADVAGEDVDAAIQAAITLAERYDTGDGVAADKGKAFAFIEIAASKGSANAMYRLSSRYFAGEGVTVDQTKATEWIKKSADLKFVEAMASMGLRYLQGVGVEKNLTAAYEQFTEAAQAGHVNAQANLGICFVNGLGVDKNYTAAKEWLEKAAASDSEIAERFLGAIHADGLGVQQNFKEAVKWYTRAAERGDAESQMVLGVMYMNANGVDKDAKTAHKWFVEAVSQGQPQAMYNLGLQYASGDGVERDDAKAFEYFTKAAERGIDGGQFNLAVCYASGLGVEKDSAMAYKWFLKGAEKNHSGCEFNVGVYLERGIGVQKDAKEAVKWYLRAAEHNSPDAHLNLGVCYTNGVGVELNGTAAASHIRKAAEMGHALAQANLAVLYLNGVGVRKDTRQALRWLRKSAEAENAVAHFHLGTLHVRGDGVKADLAKAFDHFKKAAELGHAESMLYLGLMHENGEGVEKDETEGAVWIARAEERGVKRPAPKIESSEVPAASESALEPEKESQSVPSAAKLKGVASGGDDKKDDAGALPKKGSKAARRRTTRSQSEL* # ORIGINAL: g11932.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 10870 11713 . - . ID=g11932;Name=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 10870 11713 . - . ID=g11932.t1;Parent=g11932;Name=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 11583 11713 . - . ID=g11932.t1.exon1;Parent=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 11583 11713 . - 0 ID=cds.g11932.t1;Parent=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 11295 11420 . - . ID=g11932.t1.exon2;Parent=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 11295 11420 . - 1 ID=cds.g11932.t1;Parent=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 10870 11146 . - . ID=g11932.t1.exon3;Parent=g11932.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 10870 11146 . - 1 ID=cds.g11932.t1;Parent=g11932.t1 #PROT g11932.t1 g11932 MATVQAAIRAVLGDVDAFASRLIGHLSAAGVDVSRYEMDHVCYRVESNDEYLEKKKELNTIGQQLYGDAIIGGRPIATFKLNEPIRTNGKEVTCVELPSPKRGSPYKTGLEHAEFVIDESFEAFMARHPSLVFDLDAINKEINADVRLSFEDGAISAKFHHMPLEKVMDLENASPAS* # PASA_UPDATE: g11929.t1, single gene model update, valid-1, status:[pasa:asmbl_3506,status:3], valid-1 NODE_20_length_64004_cov_41.6849 . gene 1464 4840 . + . ID=g11929;Name=g11929.t1 NODE_20_length_64004_cov_41.6849 . mRNA 1464 4840 . + . ID=g11929.t1;Parent=g11929;Name=g11929.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 1464 1504 . + . ID=g11929.t1.utr5p1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 1464 1552 . + . ID=g11929.t1.exon1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 1505 1552 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 1677 1746 . + . ID=g11929.t1.exon2;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 1677 1746 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 1867 1911 . + . ID=g11929.t1.exon3;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 1867 1911 . + 2 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 2128 2247 . + . ID=g11929.t1.exon4;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 2128 2247 . + 2 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 2448 2782 . + . ID=g11929.t1.exon5;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 2448 2782 . + 2 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 3212 3380 . + . ID=g11929.t1.exon6;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 3212 3380 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 3625 3812 . + . ID=g11929.t1.exon7;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 3625 3812 . + 2 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 3905 3994 . + . ID=g11929.t1.exon8;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 3905 3994 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 4192 4320 . + . ID=g11929.t1.exon9;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 4192 4320 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . exon 4459 4840 . + . ID=g11929.t1.exon10;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . CDS 4459 4680 . + 0 ID=cds.g11929.t1;Parent=g11929.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 4681 4840 . + . ID=g11929.t1.utr3p1;Parent=g11929.t1 #PROT g11929.t1 g11929 MQRTVLWCARAVRGPQSTATIRAASWASSHNLSQWRPSLGCVRSFTDVTSTDRSGSETTSHDENMRNMRHVLRHRSFIVNQLWDERKAHMMKSRMASATKEQGVVPPKRMSDSFLEMELPFATDPHLRDDYTNVFGGLRFGKLLEDLDAFAGSIAYKHCDDGCSSTRPLFIVTASVDRIDLLRPLMSDRNLKVSGSVTWVGKSSMEVTMRMSAVDPTTNSAEPLMVARFTMVARNSSNKASAVVPQLILETDTEKEVFSMGAEDKQKRKAAADLDLTKEAPTVDERHVIHALYLEQLKRTEMGTADNTKFMRETVMKSTRLCQPQDRNIHGKIFGGMLMREAYELAWSTAAVFCKAYPKALAMDDVSFRLPVEIGSILEYSSEVVFSEGPPHKSFQVSVAANFINPMTGVRQTSNVFNFAFLCHDVDVPRVIPESYGEAMRYLAGRRRYVRGKEFAESIHKLLLAAPVIPQ* # PASA_UPDATE: g11944.t1, single gene model update, valid-1, status:[pasa:asmbl_3518,status:3], valid-1 NODE_20_length_64004_cov_41.6849 . gene 55387 60626 . - . ID=g11944;Name=g11944.t1 NODE_20_length_64004_cov_41.6849 . mRNA 55387 60626 . - . ID=g11944.t1;Parent=g11944;Name=g11944.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 60419 60626 . - . ID=g11944.t1.utr5p1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 60419 60626 . - . ID=g11944.t1.exon1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 59968 60092 . - . ID=g11944.t1.exon2;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 59968 60092 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 59672 59778 . - . ID=g11944.t1.exon3;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 59672 59778 . - 1 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 59471 59547 . - . ID=g11944.t1.exon4;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 59471 59547 . - 2 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 59106 59273 . - . ID=g11944.t1.exon5;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 59106 59273 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 58675 58911 . - . ID=g11944.t1.exon6;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 58675 58911 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 58367 58440 . - . ID=g11944.t1.exon7;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 58367 58440 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 57129 58121 . - . ID=g11944.t1.exon8;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 57129 58121 . - 1 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 56663 56905 . - . ID=g11944.t1.exon9;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 56663 56905 . - 1 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 56322 56427 . - . ID=g11944.t1.exon10;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 56322 56427 . - 1 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 55990 56052 . - . ID=g11944.t1.exon11;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 55990 56052 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 55723 55800 . - . ID=g11944.t1.exon12;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 55723 55800 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . exon 55387 55554 . - . ID=g11944.t1.exon13;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . CDS 55501 55554 . - 0 ID=cds.g11944.t1;Parent=g11944.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 55387 55500 . - . ID=g11944.t1.utr3p1;Parent=g11944.t1 #PROT g11944.t1 g11944 MAAHLGIRSPSLDEVWQLLQNGMNRVLEFQTMAHQEHILLYTHVYNYCTSVTCGNGTMGPPPRSVAQSRRKEEPATSGAHFVGHDLYNKLGDFFRAHLGRIGETGKDLLGENLLVFYRDQWNNFVFGAKVVNHIFQYLNRYWVKREKEEGNNAIHDIYTLCLVVWRDELFNSMKSKLTNALLDQIDRERNGEAVNISLLREVINSYVNLGLQDVDPATGHQQSPLVVYKSSFEVPFIQMTKQFYARESASFLQNHSITEFMTKVEIRLGEEADRIEKYIHRESRAILIATCEHELITNHMEMYQTEFATLLSNDRAADLKRGYNLLNRITNGLEPLRAKFEEHVSERGLAAVAAVAEAAAQDPKQYADTMLAVHRKYSAMLKDAFTSDTTFVAALDKAFRKFVNTNAVTVATKSGSKSPELLARYCDSLLKKSAKNPEENELEELLNDIMVLFRYVEDKDVFQKFYSKMLAKRLVNQASASDDAEESMISKLKQACGYEYTTKLQRMFNDVGLSKDLNDRFQQHVAKSNPLNVDFNIMVLGTGSWPLNPPTTPFTIPEELERSVNRFTGFYQNQHSGRKLNWLHHHSKGEIQVSFAPNQKYTLQSSTFQMALLLQFNRNDSLTLEELKAATGINDETIKGVLGTLTKAKLLDAEDAEETDFESATKFTVNTDFKSKRIKININIPIKAEQRIEQEETDKTIEEDRKMLIQAAIVRIMKMRKVLKHNLLMNEVITQLTNRFKPKVPVIKKCIDVLIEKEYLERVEGQKDTYSYVA* # PASA_UPDATE: g11934.t1, single gene model update, valid-1, status:[pasa:asmbl_3513,status:12], valid-1 NODE_20_length_64004_cov_41.6849 . gene 16145 25864 . - . ID=g11934;Name=g11934.t1 NODE_20_length_64004_cov_41.6849 . mRNA 16145 25864 . - . ID=g11934.t1;Parent=g11934;Name=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 25784 25864 . - . ID=g11934.t1.exon1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 25784 25864 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 25014 25060 . - . ID=g11934.t1.exon2;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 25014 25060 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 24779 24855 . - . ID=g11934.t1.exon3;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 24779 24855 . - 1 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 24310 24515 . - . ID=g11934.t1.exon4;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 24310 24515 . - 2 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 23915 24055 . - . ID=g11934.t1.exon5;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 23915 24055 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 23591 23695 . - . ID=g11934.t1.exon6;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 23591 23695 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 22909 23420 . - . ID=g11934.t1.exon7;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 22909 23420 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 22622 22713 . - . ID=g11934.t1.exon8;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 22622 22713 . - 1 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 22284 22465 . - . ID=g11934.t1.exon9;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 22284 22465 . - 2 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 21928 22053 . - . ID=g11934.t1.exon10;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 21928 22053 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 21657 21770 . - . ID=g11934.t1.exon11;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 21657 21770 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 20913 21326 . - . ID=g11934.t1.exon12;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 20913 21326 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 20532 20645 . - . ID=g11934.t1.exon13;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 20532 20645 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 20151 20321 . - . ID=g11934.t1.exon14;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 20151 20321 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 19704 19829 . - . ID=g11934.t1.exon15;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 19704 19829 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 19374 19465 . - . ID=g11934.t1.exon16;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 19374 19465 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 18977 19064 . - . ID=g11934.t1.exon17;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 18977 19064 . - 1 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 18739 18840 . - . ID=g11934.t1.exon18;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 18739 18840 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 18316 18507 . - . ID=g11934.t1.exon19;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 18316 18507 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 18049 18156 . - . ID=g11934.t1.exon20;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 18049 18156 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 17781 17858 . - . ID=g11934.t1.exon21;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 17781 17858 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 17428 17586 . - . ID=g11934.t1.exon22;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 17428 17586 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 17113 17304 . - . ID=g11934.t1.exon23;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 17113 17304 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 16766 16972 . - . ID=g11934.t1.exon24;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 16766 16972 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . exon 16145 16591 . - . ID=g11934.t1.exon25;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . CDS 16475 16591 . - 0 ID=cds.g11934.t1;Parent=g11934.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 16145 16474 . - . ID=g11934.t1.utr3p1;Parent=g11934.t1 #PROT g11934.t1 g11934 MPPKSGPGDEQALINYYAREGYYRHIQEAVHELEARLTKEEDSAGEVAIEQAALYLWHAGRFDEARKKGDKFLQMCRDGADRSAERSVMYVRALTLRGWIDLTCGRESTAKKVDKAFLNEALKSMGDNKNYEALLAMARHLSVNRRRSSDALECINMIIASNQTFLPALVEKMRVLLSMDDWDQALEVTQRIMEINPQDVEAARMVLLHRLARIGGYPQAAKRLGELIQTLDRFEPKNHRVYFECARSLCRLAGRNPLVLQQTLELVERARTLMPLSAEYTTEAGYQQLLRGDVPAALASYKAAMKLDESSVSALNGIIRCQLIDGQIEDAEQQLEFLREIQTSIGKSAELCQLSSYLAWKKNRDSQTALANLGEAIDVQVVSVKDTPISHEYFVRLNPTFLLQIVDEYLQFVPAEPKNEAEPASPVLAKCTEVLEMLAKICPGMLSVMYQLARVRYLNGDIDGAQAALQRVLKQDSTYSEGHLLMAQIYLTQSNYKMAGQSLEVGLSYNFEVREFPLYHLIKARIQKRTGLLAESMQTLNAAMALPGVRRATEEEGTSGKRSKKQSKAPVRDIPNSDRVSVFLELADSLRRLDQQHEATKVMQDAINEFSRTAEEARVQIANAELSLARGDVDVALATLGGIGPDQPYFANAKAKMADIFLHQRRDLKMYAACYKELVDRNPSTHSCMMLGDAYMSITEIDRAIHVYEEALKKNPHDSILATKIGKALVRTHNYSKAINYYVAAVKNGGQAFLQYDLAELYLKLGHADKAERVLLEALNPDSQPPSEPAAMIQDAKMWVLLARVYKEGGAPQRIADTLVRARELQTRVLVRIAREQPDQLRTQKLQTSTICFQLADHFMSQREYEKASGFYKEALTYDETSEKAMLALAKLYLSQGELDLCQQQCVSLLRMNHSNDAATIMMADLMFRKGEYESATFHFQQLLERKPNHYEGLSRVIDLLYRAGKLPDCQKFIGQATKASPRAASEPGLNYCQGLYNRYSNNPNEALKHFNRARKDQEWGELAIYNMIEVCLNPDNETIGGETFESVTDNSQSGSSEKPEAELFAVKTAEKLLKEVKNRPKSFRHQILECNALMATKLKTNIEKALTQYMELLNTERDSVAALLGMATAYMLLKQTPRARNQLKRIAKMNWNASEADDFERAWLLLSDIYVQGGKYDMAQELLKRCLQHNKSCTKAWEYMGYIMEKEQSYRDASDHYENAWKFSSESNPAVGFKLAFNYLKAKRYLEAIDVSRKVLTLYPNYPKIRKEILEKASGSIRP* # ORIGINAL: g11945.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 61092 63206 . - . ID=g11945;Name=g11945.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 61092 63206 . - . ID=g11945.t1;Parent=g11945;Name=g11945.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 61092 63206 . - . ID=g11945.t1.exon1;Parent=g11945.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 61092 63206 . - 0 ID=cds.g11945.t1;Parent=g11945.t1 #PROT g11945.t1 g11945 MYTNESCDEGEDPTPTHELGETQREEAHKGSRSHFAAGGLPANHPLHAQLPLRPRFHTESPLLRNAHRSAHTDNDRHDETSASGGQFWAQDNSSRDRWNVTRTEPWLPMSGRDHFYAPQPRPHDVHRVDEQRHITLGGVRNGGEQNAVGYRQGGGGGSGGYLADVQFGFEMPRGARQSNNAPTLFGQRLGGGGVGGGDPSNGATAVHLRGQNAHLFDDSQGQELWAAQQGHVLAGGTLRRSVDHQYPLGMTSPWTHDMSQAVYVGGAEQAGMASEVDVRVGGVAAVAPLAYAPTTRPGARPAPKRLSNGSITFFPSSGVSIQTADHSAHDTHNNNNAAPPLFISKSEPGADTATNASHTFGTPPPIAHMLGGGGRGGTHLVGALDSTNGVSYDQPAFYSDRQPMTSWYPFSGSLAIPRGPPYAAHALTGGGVEHLDFAHGDHHRSEPARPAVPFGTSLLIDHGETSDETHAPGQPMYTHHQEANRGRLNPRGRPPSVGQFGPISRPSHAAPPAETGTRPLLRHTSHGTTGPASANSEPSTAHVEPSHTATRLGSGLVPVVQSQRKVVRRKRCRKSEQVQCTFLGCGAVLQKSSLRYHFESEHSFGPGGTSVRFSCRAKCCSCAKTPIYKTDPARSMHELRMVRKAAKQGLIPQSLEDLQQMKAQFPREFHQHIVDIEFIGATPPSPGSHTEDDGGSPANDDEEL* # ORIGINAL: g11939.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 42500 43357 . + . ID=g11939;Name=g11939.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 42500 43357 . + . ID=g11939.t1;Parent=g11939;Name=g11939.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 42500 43357 . + . ID=g11939.t1.exon1;Parent=g11939.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 42500 43357 . + 0 ID=cds.g11939.t1;Parent=g11939.t1 #PROT g11939.t1 g11939 MSRMLIIVAGLLALATVAVSTRPPVVVPSSSAPVTDNMLTWLDPSAPDAFVMANDGIRIRQWTDQSPRKKHFVQPNPQKQPMLVTLDGRARRDDEPCVENCGPSFGNGTGMVGSGGTIGSSPYRRRSTGSVSTAHIFIVSRGSSDADAFILESLLKVSAPNGRTFLDIGHMEFAGGLGNAFAVSINAVANAATAVSSGNAANPLDVWTITITPQMGWATRITIYKNNAFLSTSMLLGTPPYGVSKAVLANTFNGVVGELMVYSDMTNDERSATTLFLCDKHSIAC* # ORIGINAL: g11936.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 31473 33003 . + . ID=g11936;Name=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 31473 33003 . + . ID=g11936.t1;Parent=g11936;Name=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 31473 31851 . + . ID=g11936.t1.exon1;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 31473 31851 . + 0 ID=cds.g11936.t1;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 32021 32269 . + . ID=g11936.t1.exon2;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 32021 32269 . + 2 ID=cds.g11936.t1;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 32461 32578 . + . ID=g11936.t1.exon3;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 32461 32578 . + 2 ID=cds.g11936.t1;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 32754 33003 . + . ID=g11936.t1.exon4;Parent=g11936.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 32754 33003 . + 1 ID=cds.g11936.t1;Parent=g11936.t1 #PROT g11936.t1 g11936 MGFSEADEVLDTSRESPVYQVIVTVVEEDAKEHDDEHDMCDERSHVDCHAPPPPYKAKDDGRMHDGGAEYHPLGDLPGSVTKLPSYDEVQRGDAGTCASVPATVSPQTIVEVSPVLYGLSERSIRLGFIRKVYGILTAQILLMCAMIIIFMTVDAIKGYVQSSNKLFFAMVGSALGLALILLMLRKVHPLNLIIYFLFTVCMSFAVATAATLYNAWTVLQAAILTLTVLVALTIFTFQSRRDFMVVQSLCFLAMWIVLSAGLIEVFVYSSMSNFGYSVLGSICFSGYIVCDTHFILTSFEPEEYIMASMQLYLDVVNLFLYALSLLSKFNG* # PASA_UPDATE: g11943.t1, single gene model update, valid-1, status:[pasa:asmbl_3509,status:12], valid-1 NODE_20_length_64004_cov_41.6849 . gene 54324 55127 . + . ID=g11943;Name=g11943.t1 NODE_20_length_64004_cov_41.6849 . mRNA 54324 55127 . + . ID=g11943.t1;Parent=g11943;Name=g11943.t1 NODE_20_length_64004_cov_41.6849 . five_prime_UTR 54324 54437 . + . ID=g11943.t1.utr5p1;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . exon 54324 54524 . + . ID=g11943.t1.exon1;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . CDS 54438 54524 . + 0 ID=cds.g11943.t1;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . exon 54744 54794 . + . ID=g11943.t1.exon2;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . CDS 54744 54794 . + 0 ID=cds.g11943.t1;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . exon 54957 55127 . + . ID=g11943.t1.exon3;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . CDS 54957 55070 . + 0 ID=cds.g11943.t1;Parent=g11943.t1 NODE_20_length_64004_cov_41.6849 . three_prime_UTR 55071 55127 . + . ID=g11943.t1.utr3p1;Parent=g11943.t1 #PROT g11943.t1 g11943 MGLNVEEEVKHLAKEIKRLGKPGPDGKYRVAYGVLFRDDDVANTFEALMGTLKAAKRKKVIDFEGELLLQNVHDKVEIVLLQE* # ORIGINAL: g11940.t1 original gene structure, not modified by PASA NODE_20_length_64004_cov_41.6849 AUGUSTUS gene 43985 47424 . - . ID=g11940;Name=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS mRNA 43985 47424 . - . ID=g11940.t1;Parent=g11940;Name=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 47251 47424 . - . ID=g11940.t1.exon1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 47251 47424 . - 0 ID=cds.g11940.t1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 45858 47073 . - . ID=g11940.t1.exon2;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 45858 47073 . - 0 ID=cds.g11940.t1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 45571 45707 . - . ID=g11940.t1.exon3;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 45571 45707 . - 2 ID=cds.g11940.t1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 44825 45366 . - . ID=g11940.t1.exon4;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 44825 45366 . - 0 ID=cds.g11940.t1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 44582 44675 . - . ID=g11940.t1.exon5;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 44582 44675 . - 1 ID=cds.g11940.t1;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS exon 43985 44470 . - . ID=g11940.t1.exon6;Parent=g11940.t1 NODE_20_length_64004_cov_41.6849 AUGUSTUS CDS 43985 44470 . - 0 ID=cds.g11940.t1;Parent=g11940.t1 #PROT g11940.t1 g11940 MWRVNIKRTLWILLVSLQVVLDDDNHNAQTRSEIVKYVKENQKSCRIECRQVVPIGGKRQCMWMYEWAVAELLSNNGSQPVDVYMRDRKWSVMQRAFEVWFNHNGDEIAREIPSTAEGFDAVTSVNSHPSYALPPHNLFAAKEPFSVPALFLELDAAFTIAAVMPGETPEPTIRPGIDAVIADWIKGVGRRRADDGFQISECDCAVIFVGDLKAQMLDGIYDSERGKRIVDIAVKNLADIMGRGVVLRYLFCADADQVGSRFASPQDAGTFALLQRLYGLSLWHQQTLLIHYRQQRYFVGAEAAGIRTAKVDQLLANPLSVHAARVPVKSAPQFMLGKYVGVSCDFKPEFRNVLNTDTGIGITRASVGYSLHVTVGPDVPVQRGPAADAEADLQSSAFVEGVSLSLSTVEAHAPNRTTLARAEEYSRLLNDMVLRDWGGGVLKLKCTCRGEGVYKVTARLLADGSVAQSTCSCPMGRRCVCKHQIALLKAFSQRKEDFAVQPRKNKGGALTQRNLPDERASSPIALDRRDNYYRTNNATADNELLPLASEPPKPVMVASTVPGGRALPSYMLGVNGGSAAAAPAGRGARNVAAVTAPAARVQPQGRGRGRGRARNAAAAEEQQRAQEAERQLILRVQQQRQLQQQQQLQQQQQLQQQPQQHQQQQPPPSTALHEGARRLRPESDAAEARRVRARGLPEPPQSVPEMTESEFLETALQIIREHKAKGPEVAPSTVATTAPGAMSGASADLQATSNIASSTSSDAPSANRTADFLFAMGICAPPSVDAAATPPAAVSVLSSAVNCSPQSIGHGSALSAPPPTVAATVAPSRDFFGLFAPPAVPSSTSASAVASSVSASAPVAPATVAHANPANAALSLLFGWPM* # ORIGINAL: g12509.t1 original gene structure, not modified by PASA NODE_2740_length_5267_cov_74.3912 AUGUSTUS gene 536 1438 . - . ID=g12509;Name=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS mRNA 536 1438 . - . ID=g12509.t1;Parent=g12509;Name=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS exon 1012 1438 . - . ID=g12509.t1.exon1;Parent=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS CDS 1012 1438 . - 0 ID=cds.g12509.t1;Parent=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS exon 787 890 . - . ID=g12509.t1.exon2;Parent=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS CDS 787 890 . - 2 ID=cds.g12509.t1;Parent=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS exon 536 637 . - . ID=g12509.t1.exon3;Parent=g12509.t1 NODE_2740_length_5267_cov_74.3912 AUGUSTUS CDS 536 637 . - 0 ID=cds.g12509.t1;Parent=g12509.t1 #PROT g12509.t1 g12509 MARNKTVQSAPRNICVGVVGSRAADFIARANHQSTPPDASCLHGRFVFPHGRPHTIEFTHMIGLNAYPLLLGTLVCNASALILACEEHECIDQVMNIHPTVLTSREMRPFFSVVVVFGKTRNTKEINRVAAEHGWDVCYISNESEQLQYEKVDDELTELAEKCTTANSATKIKRESKEALSQSANGQESRAPSLASRLATSLSTAFRRRV* # PASA_UPDATE: g12510.t1, single gene model update, valid-1, status:[pasa:asmbl_4915,status:12], valid-1 NODE_2740_length_5267_cov_74.3912 . gene 3120 5194 . - . ID=g12510;Name=g12510.t1 NODE_2740_length_5267_cov_74.3912 . mRNA 3120 5194 . - . ID=g12510.t1;Parent=g12510;Name=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 4953 5194 . - . ID=g12510.t1.exon1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 4953 5194 . - 0 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 4652 4724 . - . ID=g12510.t1.exon2;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 4652 4724 . - 1 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 4285 4408 . - . ID=g12510.t1.exon3;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 4285 4408 . - 0 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 3880 3943 . - . ID=g12510.t1.exon4;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 3880 3943 . - 2 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 3476 3650 . - . ID=g12510.t1.exon5;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 3476 3650 . - 1 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . exon 3120 3323 . - . ID=g12510.t1.exon6;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . CDS 3255 3323 . - 0 ID=cds.g12510.t1;Parent=g12510.t1 NODE_2740_length_5267_cov_74.3912 . three_prime_UTR 3120 3254 . - . ID=g12510.t1.utr3p1;Parent=g12510.t1 #PROT g12510.t1 g12510 MQINSHRHSAAIACSYKTSDGHLFPLERGIVFVKPPIYVAYEDVSEASFSRLGSSAAASRSFDLSLDCRDGSSFTFNGIQKEEFSALHSFLADKKLSIQKYSDEKGSIQQEDDVVDGRSGRREDDKGDHDAYLHRVQAEADDEDSEDDEDFNAGDGDDGSSSSDDSEGSDDSDASDASDASDASGDGKGKKRKAPSKKKESPKKKSKTDKDDAKGKGKSAKGKGKESPKKSISAKFKSDEFVASDDDE* # ORIGINAL: g6307.t1 original gene structure, not modified by PASA NODE_1377_length_11689_cov_50.1648 AUGUSTUS gene 2850 9464 . - . ID=g6307;Name=g6307.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS mRNA 2850 9464 . - . ID=g6307.t1;Parent=g6307;Name=g6307.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS exon 2850 9464 . - . ID=g6307.t1.exon1;Parent=g6307.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS CDS 2850 9464 . - 0 ID=cds.g6307.t1;Parent=g6307.t1 #PROT g6307.t1 g6307 MYASSTAAAAADTSGCSKEEPSESETQAIIDLIDGTVEVDSDDDNVPTDGTDELSAAAVGIRMHDPTSAVGAAAEHTNTADEMVIETPHSMFAKMVAHPTIFPRHASMTAQTGRDMVVVDGDSIVASAFRVRTFPEYGDIASPAETPSTRWTPLEEFQSLAAIHDIERLFLGFIENGHQFRVCFVESARDHWSADRVVARDLVQHHIKTRLGESVALDVICVSDMDRSAGDRDVSLPIFRSYQEYLLLQRASFMMVDFLWDEDDYTGAPFTQGLRTHVAAVAASCLDANIPVVDMVGDDGGILLLSQGEWKSYFVRVPYLPGIRKACTYIMRLACRWLHRSSTALKSENKASRTLDDGDVCDAAMLIAGRQATLASTSSAACAMQATSGRTTNPAEFGVVASAVAASSLLVASEYASGGIAWTALAHMAAMTIAGVTPCQIRAQTLISDISNRDGQAPPTTMGELPRLCEFATALGHSAGHVMRLNLDNGSICWDVTDAIDIRMMRAVTVAVEPDGMAIEASNNDNNVEAIFRDGSYELLVSRLSIALFGTTADGMRTDEQETAVSTLSLAIKWVFGKVCGSEDGRRSWIAAVGRLLASNNNRGTSVGGGAVRVTAADARGGGSGDAQWGVLLDGSECALTRRAFGIEEKQQSVNVNAGPSATALPTFNVDYHYHTGQTLLNLGDALRKEERATLFGDSRGPIAKKWEFKSVQKIATYARNRAETLQMEAGGKAKTIVSMGVGSGASFASTAIGSAPKLLQIAGRLRQAKEELDKFEENPEQTLRHLGRSGTVRIPRALPAYPQDWEDDQMRGLRGAKEKDRVRRAAEIAEIKSEWRGLCMRGILAVARVHAMRMGLYVDDGNAGGSRLQSHSVGGDANGSGSDTDGSGGDIARLADTLDCGWRLLAQLRKLTHMEPTKEEMSPSTRLGRRVVKCLLRPLYVATGILSVFRRFVSLVEREVTRFCKLVSMDLEKSARKGIRGGSNELEEGERAADEAEFQLKHMPERLLRTPGVRDARTSFRPDEWQVRLLNAVDEGRSCLAVAPTSSGKTFICYYAMERVLRESDTGIVVYVAPTKQLVSQVYDEVLARFSKTYRGKSEGTAVVGTFTRDYRHHERTCQILVTVPSCAEIMFLSSDTKVLGSGWAERVRYIIMDEVHNIGEDDGAVWERLILLANCPIIALSATIGNASAFLSWLEYAQETKGRVQMDDGVRVVKGPRGKRDATPTTDAADSRPGWNDSDDEGDAEWMLSRLGGPEKTELGQSPLDDDTDKGPRKSAAASNKGKKLPEKHGKGHNSASIPPPTDALRMTATEGRQGGSAVASSLVEMIEHSERFNDLSFSVWDSTADATVRFNPLCAVSVRALRNTGKVPRALPLLTPEATLELHAIVEMAITNALSASVAEHAHVGTPGHLRCQRLSAAQKLLEDLRPANHFPDAANPISMQDAHVYSKAVVEVVVNLSQTDFDVAEAVMSALSAPSERALNEARAMWGLTDIAVGLRNAIPGAIAALQREQLLPGIVFHLSQNGCTKMALACSAALREKQESINLARKESDRAEALALVEKKNTAMGIRDRAAEQGDARASGEYTNKVEECIRALNAIASRKYLRQEATLFAGESRFDAPTVDELREALRDDSLTEESVFADDLLDALRRGIACHHATLGTRYRMAVESLFRAKKLRIVFATGTLAQGVHMPCRTVVIAGDSNFLHSLSFAQMTGRAGRRGLDTRGNVVLFNLSKEKIAQVIGGDFPSIAGNRVLTVATVLRLLVRAFQGGDERIDGVAAELRRLVDGSIVAHARPSFKPIARRFVLYALDHLRREGIVNADSISPYNIAGLVTHLHYLEPGCILVGVLMQDSAFLQSLDAVSERISALATAAYKENRRLETVPREATELVLGALSTVIGVVPIRKSQVESLAKRKPGTFLSRVALVATRDLPPAFVETAAQYNRGALGLLVAHLKAHVGERADSATGDLETDSTDSADWRRLPLSEGSRVPREDEHQGKRAQSNSFPTGTVSPHAGIVGRLATNANKVILRNPYWAMRGLGDDFSSADELRTTARSDLHTVLLDAPAFAVGAVNSYALDFLRHGQKGRIQTENMLQDALAYKLLDEFLLGLTAAAVALFKNTDAVVANHFMVTKGMRASVDPLSLCVLVDDGAAFLKKMWPDDRLEPGMLMQLNVVRVLVADSRKFKERMEMFNVRGRSK* # ORIGINAL: g6306.t1 original gene structure, not modified by PASA NODE_1377_length_11689_cov_50.1648 AUGUSTUS gene 132 1678 . - . ID=g6306;Name=g6306.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS mRNA 132 1678 . - . ID=g6306.t1;Parent=g6306;Name=g6306.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS exon 1637 1678 . - . ID=g6306.t1.exon1;Parent=g6306.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS CDS 1637 1678 . - 0 ID=cds.g6306.t1;Parent=g6306.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS exon 132 1398 . - . ID=g6306.t1.exon2;Parent=g6306.t1 NODE_1377_length_11689_cov_50.1648 AUGUSTUS CDS 132 1398 . - 0 ID=cds.g6306.t1;Parent=g6306.t1 #PROT g6306.t1 g6306 MPWDDPNSNPHVAQVHMNPGADYECRTDIPFCRVLGAEYPRLGYRRRKGEVKTVIHWGQRKLLLSEIEFLTLYGRRGHPVVYAGAAPGTHIKYLAELFPELDFVLVDPSPFTVKETRQITLRQELFTDDLAREFVGREPLFVSDIRAADWQELEEDETERQVQEDMDAQMRWHEIMKPLKSMLKFRLPWKPGRTRYLAGEIYLPVWGPITTTEARLIVSEGYVDYDNTMYEEQMFYFNTSARVGLYKHCVEGVGIDHCYDCRAEVDILCAYLRSRSQMPEDERELWRRISAMSADMSRTCAPNRTLASPNSDPETRKKGIRQRQWIEGMPAYVHAKRKREDEREPVDLQARYGLGHRLLARMGYETGSGLGAAGQGIVSPVEAQQRDFRRGIGFDVRSVLTRGERERAAGVQLTGGDALEHRNGDGMGVEANVPGQ # PASA_UPDATE: g12335.t1, single gene model update, valid-1, status:[pasa:asmbl_8489,status:12], valid-1 NODE_6147_length_630_cov_31.5117 . gene 100 630 . + . ID=g12335;Name=g12335.t1 NODE_6147_length_630_cov_31.5117 . mRNA 100 630 . + . ID=g12335.t1;Parent=g12335;Name=g12335.t1 NODE_6147_length_630_cov_31.5117 . five_prime_UTR 100 262 . + . ID=g12335.t1.utr5p1;Parent=g12335.t1 NODE_6147_length_630_cov_31.5117 . exon 100 319 . + . ID=g12335.t1.exon1;Parent=g12335.t1 NODE_6147_length_630_cov_31.5117 . CDS 263 319 . + 0 ID=cds.g12335.t1;Parent=g12335.t1 NODE_6147_length_630_cov_31.5117 . exon 466 630 . + . ID=g12335.t1.exon2;Parent=g12335.t1 NODE_6147_length_630_cov_31.5117 . CDS 466 630 . + 0 ID=cds.g12335.t1;Parent=g12335.t1;3_prime_partial=true #PROT g12335.t1 g12335 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMD # ORIGINAL: g2034.t1 original gene structure, not modified by PASA NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS gene 2725 2970 . + . ID=g2034;Name=g2034.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS mRNA 2725 2970 . + . ID=g2034.t1;Parent=g2034;Name=g2034.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS exon 2725 2970 . + . ID=g2034.t1.exon1;Parent=g2034.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS CDS 2725 2970 . + 0 ID=cds.g2034.t1;Parent=g2034.t1 #PROT g2034.t1 g2034 MSSVGGGGSLLTADNIVDGHDEDNNIDDPDEELSAFERALVHAKTGLFGVLFIIAKQVEQNSLFVIIEIIIDFLQVLSFTLA # ORIGINAL: g2033.t1 original gene structure, not modified by PASA NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS gene 179 359 . - . ID=g2033;Name=g2033.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS mRNA 179 359 . - . ID=g2033.t1;Parent=g2033;Name=g2033.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS exon 179 359 . - . ID=g2033.t1.exon1;Parent=g2033.t1 NODE_3678_length_2970_cov_51.963_potentialcontaminant AUGUSTUS CDS 179 359 . - 0 ID=cds.g2033.t1;Parent=g2033.t1 #PROT g2033.t1 g2033 MALPVCPYQPPPPLCSQVDDIASSTNSYIRMCVKEEYDLTVDFKRERELGFREILIAPGQ # ORIGINAL: g53.t1 original gene structure, not modified by PASA NODE_1260_length_12616_cov_50.9664 AUGUSTUS gene 8233 10388 . + . ID=g53;Name=g53.t1 NODE_1260_length_12616_cov_50.9664 AUGUSTUS mRNA 8233 10388 . + . ID=g53.t1;Parent=g53;Name=g53.t1 NODE_1260_length_12616_cov_50.9664 AUGUSTUS exon 8233 8252 . + . ID=g53.t1.exon1;Parent=g53.t1 NODE_1260_length_12616_cov_50.9664 AUGUSTUS CDS 8233 8252 . + 0 ID=cds.g53.t1;Parent=g53.t1 NODE_1260_length_12616_cov_50.9664 AUGUSTUS exon 8618 10388 . + . ID=g53.t1.exon2;Parent=g53.t1 NODE_1260_length_12616_cov_50.9664 AUGUSTUS CDS 8618 10388 . + 1 ID=cds.g53.t1;Parent=g53.t1 #PROT g53.t1 g53 MAAYIARHAASIELISFAVVGAAPWILVNAVWVELPSYVDRLPEGYEIATRLALAVQCANVIPFAYGFIPMRLRPRLETTILSLMLVLVVLCACASSWWDATAQIASGEASVALIVITFLAGACGTLSNVTLWPYVSRFRPSVMLATSVGVGLSSLVPSIMGIGQHPGPHARFATASFFGAISGVAGVSFVTFCWVVYWKRNLPSQGDSEHPSITAPSDGDCMKKEGDNADICTRRTIDDPAADHVDGVSDGHHHTDAGETHPLLSDACNQRRSRGQHGADTDAHKCDPGDNIDHANGCGAVFVAARREAFPLCIMAYASVLNFFVPSVISYLPSRMDNASDVLLALTVSGMIAGTLGRIACLFAFASTPNAHDEIAPEAHRVGASGNQVCPNLTCTGGDQRSAAHDANAHCGYSPHSSVADISSRDALIATSDYARHCSTSVAPARESNCGSLDSIASATVGHCNEAAYRLRALPKKLVDAPTSSHASQSAPHIRRLIMALPPICVCVQTASFALLFVGGYPLGFSAILLVGAYAVASATFGCTSTLLYRRAVLFSGGSSASAEASCSRLAFAEQAGATLGTLVAFFLVQYGVIH* # PASA_UPDATE: g265.t1, single gene model update, valid-1, status:[pasa:asmbl_3734,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 27491 28928 . + . ID=g265;Name=g265.t1 NODE_219_length_30922_cov_47.3252 . mRNA 27491 28928 . + . ID=g265.t1;Parent=g265;Name=g265.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 27491 27681 . + . ID=g265.t1.utr5p1;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . exon 27491 27810 . + . ID=g265.t1.exon1;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . CDS 27682 27810 . + 0 ID=cds.g265.t1;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . exon 28134 28258 . + . ID=g265.t1.exon2;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . CDS 28134 28258 . + 0 ID=cds.g265.t1;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . exon 28408 28928 . + . ID=g265.t1.exon3;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . CDS 28408 28714 . + 1 ID=cds.g265.t1;Parent=g265.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 28715 28928 . + . ID=g265.t1.utr3p1;Parent=g265.t1 #PROT g265.t1 g265 MSAPLDRLGKGIRLNYPKEDHVSYLFRSTTPVIPPRAHGEQMKSGEIGWGINNEDMRDPTSRSVEHHRTRGECVESVEKSCQYGKIIKEYNTPPVVVRGAQAPSPCNRCDTFTPRAASTTKLNRTSLRGSPSPNSADRGHPSMVATIHRASSHTSSNQASVHSHTRGNMKSPSYVSTTSERSTLSR* # PASA_UPDATE: g262.t1, single gene model update, valid-1, status:[pasa:asmbl_3738,status:3], valid-1 NODE_219_length_30922_cov_47.3252 . gene 15065 18786 . - . ID=g262;Name=g262.t1 NODE_219_length_30922_cov_47.3252 . mRNA 15065 18786 . - . ID=g262.t1;Parent=g262;Name=g262.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 18620 18786 . - . ID=g262.t1.utr5p1;Parent=g262.t1 NODE_219_length_30922_cov_47.3252 . exon 18598 18786 . - . ID=g262.t1.exon1;Parent=g262.t1 NODE_219_length_30922_cov_47.3252 . CDS 18598 18619 . - 0 ID=cds.g262.t1;Parent=g262.t1 NODE_219_length_30922_cov_47.3252 . exon 15065 18467 . - . ID=g262.t1.exon2;Parent=g262.t1 NODE_219_length_30922_cov_47.3252 . CDS 15361 18467 . - 2 ID=cds.g262.t1;Parent=g262.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 15065 15360 . - . ID=g262.t1.utr3p1;Parent=g262.t1 #PROT g262.t1 g262 MAVSRRSAHMRTPQFAVSALLAVVFVCAAFTPSASAIVNHAPLRRIRLSALPKDDQPCNLQCWLNKLTIHIPDQTFSLGLGATGSIKNGLCTSILIGNLDSQLVPPAGARIDATGLSIQCDLGWALNAGLIHPSGSAAATVTKSELDVTLQLQKDADGLASGASLSACTATINVETIKFSGDLSTFLDLFRSTITSILKSQLNDIICTELKKVMATDLTGLLQKVDTSIRPYLTPQVPAVPPPLPPNMYDLQHNPLVGLADYVLDDVVGLDGILGINKIMNGLTKNTGALAFRNIGLSASFPLSTLGTIGFTLLSVNVTGLNTWGKFDLLNAKGPQNLTSDTQLGNLTIAVGFGINVTASTELGNAFLHEDATIYVRLENNRLKSAMQVGVSEPIIHGLTDGEMVVPACLKSAVADLNLTQLDFSFVLAELEVLAANGGTEAQLDAAINTIFQLLTSSFQVAIPAFFNGVVGGPVRQLANTQFAKLTTGQDTCTEPSAAETFNKESTAGSFAGATGVFIVILAAGLIVAASARRRSGSRGEELREPLITEDVVVYGSNDNIAKASGAAAVHSGNQWLTALLFCDKYNLFFRFGVVFYLLLNIAMFISSNTSVGASVYVYVSANGSLTKLPSLFDFSLGNSVRDMWVAEVYALSLLIAVFSGAWPYLKLMMLLLTWTLPVNILSRRRREQMLMALDVLGKWSLIDAFVLTLMMVAFHFNIVPPVSEYTPAGSFAVNAYVEPHWGFYSFLISTMMSLTITHVVLACHRKELVEPLPDRIADMAEESHYKEALHSHAFKSNRFLAKCPRLVTYSVTGLLVLAIGLVIAGSVMQSFQFEFKGAFKLLLNFLEEDPTQSFSLVSLGVQLPDSAFDSNSFGVRFIQATWFLFAIVLPLCYLVFLLVLWLVPMTPRVQHKMFHVTEVFNAWSALEVVVVSVIAALLELQQFAQFIIGDMCTQINPLLEEYLGAYLDGDAKCFDVVTKLDSGCWLLFAACLIYIVVGLLVQLTCHKALAERESKLMLVAEEDDSPQVSERQPHYVGGGGQ* # PASA_UPDATE: g261.t1, single gene model update, valid-1, status:[pasa:asmbl_3733,status:3], valid-1 NODE_219_length_30922_cov_47.3252 . gene 13204 14893 . + . ID=g261;Name=g261.t1 NODE_219_length_30922_cov_47.3252 . mRNA 13204 14893 . + . ID=g261.t1;Parent=g261;Name=g261.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 13204 13269 . + . ID=g261.t1.utr5p1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . exon 13204 13378 . + . ID=g261.t1.exon1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . CDS 13270 13378 . + 0 ID=cds.g261.t1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . exon 13655 13719 . + . ID=g261.t1.exon2;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . CDS 13655 13719 . + 2 ID=cds.g261.t1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . exon 13843 13948 . + . ID=g261.t1.exon3;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . CDS 13843 13948 . + 0 ID=cds.g261.t1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . exon 14234 14581 . + . ID=g261.t1.exon4;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . CDS 14234 14376 . + 2 ID=cds.g261.t1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . exon 14721 14893 . + . ID=g261.t1.exon5;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 14377 14581 . + . ID=g261.t1.utr3p1;Parent=g261.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 14721 14893 . + . ID=g261.t1.utr3p2;Parent=g261.t1 #PROT g261.t1 g261 MASSRAVVFVTGNKKKLEEVVAILGNAFNITSHPIDLPELQGEPDDIAGEKSRIAARKINGPVITEDTCLCFNALKGLPGPYIKWFLDKLGHQGLNNMLAAYDDKSAYALCTFAYCAGPDAEPVIFRGVTPVSASQCYAV* # PASA_UPDATE: g263.t1, single gene model update, valid-1, status:[pasa:asmbl_3739,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 19128 19768 . - . ID=g263;Name=g263.t1 NODE_219_length_30922_cov_47.3252 . mRNA 19128 19768 . - . ID=g263.t1;Parent=g263;Name=g263.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 19732 19768 . - . ID=g263.t1.utr5p1;Parent=g263.t1 NODE_219_length_30922_cov_47.3252 . exon 19593 19768 . - . ID=g263.t1.exon1;Parent=g263.t1 NODE_219_length_30922_cov_47.3252 . CDS 19593 19731 . - 0 ID=cds.g263.t1;Parent=g263.t1 NODE_219_length_30922_cov_47.3252 . exon 19128 19252 . - . ID=g263.t1.exon2;Parent=g263.t1 NODE_219_length_30922_cov_47.3252 . CDS 19128 19252 . - 2 ID=cds.g263.t1;Parent=g263.t1 #PROT g263.t1 g263 MAAIIPFLRTPASRFVGIKGYPFAPQFVSVGDGLTMHYVDEGPRGAAPVLLLHGEPSWSYLYRKMIPIIVAAGHRCIAPDLIGESSY* # PASA_UPDATE: g264.t1, single gene model update, valid-1, status:[pasa:asmbl_3740,status:12],[pasa:asmbl_3741,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 20564 25397 . - . ID=g264;Name=g264.t1 NODE_219_length_30922_cov_47.3252 . mRNA 20564 25397 . - . ID=g264.t1;Parent=g264;Name=g264.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 25362 25397 . - . ID=g264.t1.utr5p1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 25284 25397 . - . ID=g264.t1.exon1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 25284 25361 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 25080 25136 . - . ID=g264.t1.exon2;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 25080 25136 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 24757 24955 . - . ID=g264.t1.exon3;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 24757 24955 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 24508 24623 . - . ID=g264.t1.exon4;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 24508 24623 . - 2 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 24169 24235 . - . ID=g264.t1.exon5;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 24169 24235 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 23740 23832 . - . ID=g264.t1.exon6;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 23740 23832 . - 2 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 23476 23615 . - . ID=g264.t1.exon7;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 23476 23615 . - 2 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 22917 23115 . - . ID=g264.t1.exon8;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 22917 23115 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 22501 22626 . - . ID=g264.t1.exon9;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 22501 22626 . - 2 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 22143 22255 . - . ID=g264.t1.exon10;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 22143 22255 . - 2 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 21692 21822 . - . ID=g264.t1.exon11;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 21692 21822 . - 0 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 21382 21450 . - . ID=g264.t1.exon12;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 21382 21450 . - 1 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 20983 21054 . - . ID=g264.t1.exon13;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 20983 21054 . - 1 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . exon 20564 20807 . - . ID=g264.t1.exon14;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . CDS 20741 20807 . - 1 ID=cds.g264.t1;Parent=g264.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 20564 20740 . - . ID=g264.t1.utr3p1;Parent=g264.t1 #PROT g264.t1 g264 MAARVVCAIVAAFMLAAPALAFPSSLDTKFTIKNYNDFKSLIHHAAERLGIDAVETIPNINCTYIDMCDEAKICRKVCQHGSVVLDAWAVNAIRTQYLVNMDTPLQNVQLPGTHNSAISYAEGHGLEDEIVAKILQTVDKATNMVTANQQVSIVDQMRMGVHQVEVDVHFWDGDLRVCHAGGVHVPALDKLVTDLSKALGIAIDWDSETLGCFGPQDRLFDDVLAEMRTYINTVPDEVFVLFFDNEGDLTTWNKTAEFVSIVTKNFADIAFIPSDKDKYPGDWPTPREMLAAGKRLLLLSGTNYGDILLPNIFYKYGPQMSGWSEFGPGSFTAGYPACTLKDNNNTIVTDQGVILRILADSTIYGPFYYGPSGGLLTATNTPNMVECNVQYPCLDQMVPEDSEWFVWSWAQSEPAQSHPAACATLNGAAHRWSTTACDKSMYAACQSTTDKADWKLSASPVTWAAAATACPSGYKFSTPTDGLMNRRLADTVVASKTGDAVWISLTQF* # PASA_UPDATE: g260.t1, single gene model update, valid-1, status:[pasa:asmbl_3737,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 10725 12872 . - . ID=g260;Name=g260.t1 NODE_219_length_30922_cov_47.3252 . mRNA 10725 12872 . - . ID=g260.t1;Parent=g260;Name=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 12858 12872 . - . ID=g260.t1.exon1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 12858 12872 . - 0 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 12673 12758 . - . ID=g260.t1.exon2;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 12673 12758 . - 0 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 12122 12215 . - . ID=g260.t1.exon3;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 12122 12215 . - 1 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 11597 11741 . - . ID=g260.t1.exon4;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 11597 11741 . - 0 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 11212 11322 . - . ID=g260.t1.exon5;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 11212 11322 . - 2 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . exon 10725 10919 . - . ID=g260.t1.exon6;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . CDS 10738 10919 . - 2 ID=cds.g260.t1;Parent=g260.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 10725 10737 . - . ID=g260.t1.utr3p1;Parent=g260.t1 #PROT g260.t1 g260 MAQAPKASDVDFRRTWDKDKYEKLAKDRLKDDLSDNDSDRSDGGKRKERRGPPVKRELLKGRDYKVDLNSMLGKTVVVTKESGMSATGGYYCKVCDCTLKDSINYLDHINGKKHQRNLGMSMKVERSSLDQVKARLDAHKRKREEEKEEFDFDARLEARRADEERRKVQRKDHRDTKKREAAAAAAEDDGVVDPDMAAIMGFGGFGSSKK* # PASA_UPDATE: g266.t1, single gene model update, valid-1, status:[pasa:asmbl_3735,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 29593 30845 . + . ID=g266;Name=g266.t1 NODE_219_length_30922_cov_47.3252 . mRNA 29593 30845 . + . ID=g266.t1;Parent=g266;Name=g266.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 29593 30037 . + . ID=g266.t1.utr5p1;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . exon 29593 30079 . + . ID=g266.t1.exon1;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . CDS 30038 30079 . + 0 ID=cds.g266.t1;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . exon 30228 30299 . + . ID=g266.t1.exon2;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . CDS 30228 30299 . + 0 ID=cds.g266.t1;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . exon 30462 30685 . + . ID=g266.t1.exon3;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . CDS 30462 30685 . + 0 ID=cds.g266.t1;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . exon 30812 30845 . + . ID=g266.t1.exon4;Parent=g266.t1 NODE_219_length_30922_cov_47.3252 . CDS 30812 30845 . + 1 ID=cds.g266.t1;Parent=g266.t1 #PROT g266.t1 g266 MLATVQDFFELLQQDAHIDMEKLRDLAQHGVPSAVRGEVWKLLLGVAQPDQGEEVSNSKAQTVEYERFRREHSDVVSPETLKRMEGEIKRYHPEIDALQGDGKKNALQTVVSVIESENVFVDA* # PASA_UPDATE: g258.t1, single gene model update, valid-1, status:[pasa:asmbl_3732,status:12], valid-1 NODE_219_length_30922_cov_47.3252 . gene 325 5262 . + . ID=g258;Name=g258.t1 NODE_219_length_30922_cov_47.3252 . mRNA 325 5262 . + . ID=g258.t1;Parent=g258;Name=g258.t1 NODE_219_length_30922_cov_47.3252 . five_prime_UTR 325 325 . + . ID=g258.t1.utr5p1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 325 481 . + . ID=g258.t1.exon1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 326 481 . + 0 ID=cds.g258.t1;Parent=g258.t1;5_prime_partial=true NODE_219_length_30922_cov_47.3252 . exon 702 820 . + . ID=g258.t1.exon2;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 702 820 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 1100 1157 . + . ID=g258.t1.exon3;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 1100 1157 . + 1 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 1463 1624 . + . ID=g258.t1.exon4;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 1463 1624 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 1909 2079 . + . ID=g258.t1.exon5;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 1909 2079 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 2320 2448 . + . ID=g258.t1.exon6;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 2320 2448 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 2705 2779 . + . ID=g258.t1.exon7;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 2705 2779 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 3132 3208 . + . ID=g258.t1.exon8;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 3132 3208 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 3374 3527 . + . ID=g258.t1.exon9;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 3374 3527 . + 1 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 3775 3975 . + . ID=g258.t1.exon10;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 3775 3975 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 4246 4359 . + . ID=g258.t1.exon11;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 4246 4359 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 4512 4597 . + . ID=g258.t1.exon12;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 4512 4597 . + 0 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . exon 4851 5262 . + . ID=g258.t1.exon13;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . CDS 4851 5004 . + 1 ID=cds.g258.t1;Parent=g258.t1 NODE_219_length_30922_cov_47.3252 . three_prime_UTR 5005 5262 . + . ID=g258.t1.utr3p1;Parent=g258.t1 #PROT g258.t1 g258 YSERISHETQSAQQQFQVQLESVRRETEVSLLQKTNDANLLTQKLAAEEKRSAEGLEREASLKAVVADLKTQHAEAIRDATTRHTRERDELKASLEGLERRSQEDKSARIEAEKKVAQLQSDLDSAREIAKQKLEFSQKELKDCAEREKTLQGQLVAEQQRHQEQTAKLQQRLEQERAQLQAETSDLRVKVTELESKLSSARADAERERQLLDARVGFLNAQVTDLKAAEQSAQQELSSRDRQNDERMNVAKEKHRRKEKDLTDKISELETKLTATQQKHAADALALEREVARLTESVRLAEKERTDAVAKETEASRQLKELRKSQKQQIDAAMADSDRKVRELSEDFNGRIRQLQAEVEAKNAELEATRKQLQNADDKRRDLQAKAAAETSDLRARVIQLEKEVTDAERIRELESENHQKRFEELSSVAQDLAEEISKARLGKESLLVQRAKGLQQQSAAAAEKTGNARAGMFAFLRGGNNKDRERLVAAEQEVVNLGKQLQETIAERQSYAAKLADEMKKKERKIEDLGEAVLRLERRLIKEGIEFDRN* # ORIGINAL: g259.t1 original gene structure, not modified by PASA NODE_219_length_30922_cov_47.3252 AUGUSTUS gene 6333 9303 . - . ID=g259;Name=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS mRNA 6333 9303 . - . ID=g259.t1;Parent=g259;Name=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 8823 9303 . - . ID=g259.t1.exon1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 8823 9303 . - 0 ID=cds.g259.t1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 8417 8473 . - . ID=g259.t1.exon2;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 8417 8473 . - 2 ID=cds.g259.t1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 8149 8263 . - . ID=g259.t1.exon3;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 8149 8263 . - 2 ID=cds.g259.t1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 7514 7732 . - . ID=g259.t1.exon4;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 7514 7732 . - 1 ID=cds.g259.t1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 7091 7196 . - . ID=g259.t1.exon5;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 7091 7196 . - 1 ID=cds.g259.t1;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS exon 6333 6818 . - . ID=g259.t1.exon6;Parent=g259.t1 NODE_219_length_30922_cov_47.3252 AUGUSTUS CDS 6333 6818 . - 0 ID=cds.g259.t1;Parent=g259.t1 #PROT g259.t1 g259 MEVDMEIAAPFSDDDSRLPSYEELFGPGTAGLHPDVNGHASAMSSSPTSARAAAELPPAWSDAFEEVVLAESRAAAAAESTIASATAVTHSALRRKASAMSADTINPSMDAFTNVFPVLPSEDWVRSTYTTECRRHNATANATAIQYGLSINIKRQLFLRVENASILSGKKRRLPNELQVASAPGVSPFCIVMMGEASVRTKIVMDSHKPVWNMVTRTDISHAQQSCARDVSFVVKSHRKLIRHSTLGIASIRGELLEGCEGLTMRAHIPLHPKPTHSQEERAETSSATHRGHLSVSWHYSRPIADCFVLVIEALPCGGYKLSDSSSGVTVFQAEFDAETGAFLIRDAQERYCLHMRRKGPKRAWSSYELRYPGASTSGDSGLVAIVRRPAGSLVVGIEMETHEGRVGVDHIMPGAYQFARQAACHSVGAGLSASKFCLAKAVRSRRVGKITGLPRWRLSIFPTEDILSVVGLALILDASTRLSVTH* # ORIGINAL: g3014.t1 original gene structure, not modified by PASA NODE_4589_length_1425_cov_88.163_potentialcontaminant AUGUSTUS gene 1 1066 . - . ID=g3014;Name=g3014.t1 NODE_4589_length_1425_cov_88.163_potentialcontaminant AUGUSTUS mRNA 1 1066 . - . ID=g3014.t1;Parent=g3014;Name=g3014.t1 NODE_4589_length_1425_cov_88.163_potentialcontaminant AUGUSTUS exon 1 1066 . - . ID=g3014.t1.exon1;Parent=g3014.t1 NODE_4589_length_1425_cov_88.163_potentialcontaminant AUGUSTUS CDS 1 1066 . - 0 ID=cds.g3014.t1;Parent=g3014.t1 #PROT g3014.t1 g3014 MAGVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSSLHTHLRHVRLFHLWPMYNRMYIEDAQFRDEVKTTIPVGRLVLVSFDQNLQDLSAFEGVHAALLNIPKQGTGRYTTCSAADLTPLNNVHTVDIRLDWDLSDDPLAPLANARIVRLQESRVPTSFAKAESVDLISASVDINRLAGIPRVRLVCCETEQGAPITDLSALRHSRFVEITQRAGYRKTGELEDLSCLESARVVVIKNCEITILPPTTHLRAFTWHGSTLKSIPPELGGMRFLDLSRSSHLEDVSAARMVSELVLLQCFRVRDVSALGSVHTLRISDCGSSLDVSALGGVHTLDFDNVYLKGVSRLGNVHRLTL # ORIGINAL: g14197.t1 original gene structure, not modified by PASA NODE_1373_length_11716_cov_39.2347 AUGUSTUS gene 2525 7358 . - . ID=g14197;Name=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS mRNA 2525 7358 . - . ID=g14197.t1;Parent=g14197;Name=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 7282 7358 . - . ID=g14197.t1.exon1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 7282 7358 . - 0 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 6733 6852 . - . ID=g14197.t1.exon2;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 6733 6852 . - 1 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 5628 6342 . - . ID=g14197.t1.exon3;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 5628 6342 . - 1 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 5259 5326 . - . ID=g14197.t1.exon4;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 5259 5326 . - 0 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 4831 4928 . - . ID=g14197.t1.exon5;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 4831 4928 . - 1 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 4397 4535 . - . ID=g14197.t1.exon6;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 4397 4535 . - 2 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 3902 4058 . - . ID=g14197.t1.exon7;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 3902 4058 . - 1 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 3466 3585 . - . ID=g14197.t1.exon8;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 3466 3585 . - 0 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 3143 3246 . - . ID=g14197.t1.exon9;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 3143 3246 . - 0 ID=cds.g14197.t1;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS exon 2525 2846 . - . ID=g14197.t1.exon10;Parent=g14197.t1 NODE_1373_length_11716_cov_39.2347 AUGUSTUS CDS 2525 2846 . - 1 ID=cds.g14197.t1;Parent=g14197.t1 #PROT g14197.t1 g14197 MKRSVSTPHSHSTGLMAAEMPEEGEGRYGLVPHGPSSESSMTTSSANSSVALEAPKQAMRRSVSTPGSLELPPGSAGPMRGRANSYGELMSPAGPASVGMAKSHPYKRGDANTHGNTLQMRRATLSMSSSLGDGPLGASVGTLPSLVVGVQPGTPHAQHMSHVSHSLQRLHAQQQQQMQLQAAQEGYLQHGHRVGSGSGVNGSGDFNALFGFEAMSAAIPEHPLRMAGHVGSAEGVGLHMYEQAASDFGGFGRDMSVEGYAHANVDGYGHGHLHQSAPLSLQQQQQQQQQQTQQPQQTLRRYQTGSYSQLLPPAEETSLNEDQYVDEGSALPVEGCTFASRHSLDGKFVSATPALVEYLGIRPEDLIAKTMYDFVHPDDLRILGEAHHKFVESRRICEAEYRMSQGRDGYMWVRSEISSSINPFARDDQLMRLVTYPVTVKLEDTSQFGEIDAMLEKGMMPDVSQIHTLLVTARKFQTESIEMRMANATLRLKVSELQKKIHFKKTATAHLSCTECGTTMSPEWRRGPHGPKTLCNACGLRYAKKVKLPGDPPAVSTPTAQSNNMQSPLTRVPSHPGAQLQQQQQPQQPQQQQQQQQQQQQQQQMHTPAPGNPFPIPTGQPRERHVILPLDEAMDGADY* # PASA_UPDATE: g14196.t1, single gene model update, valid-1, status:[pasa:asmbl_1385,status:12], valid-1 NODE_1373_length_11716_cov_39.2347 . gene 55 1885 . + . ID=g14196;Name=g14196.t1 NODE_1373_length_11716_cov_39.2347 . mRNA 55 1885 . + . ID=g14196.t1;Parent=g14196;Name=g14196.t1 NODE_1373_length_11716_cov_39.2347 . exon 55 285 . + . ID=g14196.t1.exon1;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . CDS 55 285 . + 0 ID=cds.g14196.t1;Parent=g14196.t1;5_prime_partial=true NODE_1373_length_11716_cov_39.2347 . exon 513 794 . + . ID=g14196.t1.exon2;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . CDS 513 794 . + 0 ID=cds.g14196.t1;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . exon 1114 1257 . + . ID=g14196.t1.exon3;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . CDS 1114 1257 . + 0 ID=cds.g14196.t1;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . exon 1401 1483 . + . ID=g14196.t1.exon4;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . CDS 1401 1483 . + 0 ID=cds.g14196.t1;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . exon 1701 1885 . + . ID=g14196.t1.exon5;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . CDS 1701 1830 . + 1 ID=cds.g14196.t1;Parent=g14196.t1 NODE_1373_length_11716_cov_39.2347 . three_prime_UTR 1831 1885 . + . ID=g14196.t1.utr3p1;Parent=g14196.t1 #PROT g14196.t1 g14196 DPNTTVEFLRKGAEKVRSTVPAHVLCLCEIADIELRAGKTAEAKALLDDVEKLLGELDSVEPQIHAPFYRVSADYFKTKGDFSDYYRNALKYLGCIDVQTLPSSDAIVRAYDLGLAALLADDIYNFGELLAHPILAALANTDKEWLVRLLYAFNSGDIDKYGGLQPHWKAQADLANNVMRLQQKITLLSLMELVFKRPAENRTIPFRIIAKETKLALEDVELIVMKALSLGLIRGTIDQVDEVVHVTWVQPRVLDLKQIALLQSRVKEWSLNVNKAVLFVEENGRGVVA* # PASA_UPDATE: g14198.t1, single gene model update, valid-1, status:[pasa:asmbl_1387,status:3], valid-1 NODE_1373_length_11716_cov_39.2347 . gene 9063 10803 . + . ID=g14198;Name=g14198.t1 NODE_1373_length_11716_cov_39.2347 . mRNA 9063 10803 . + . ID=g14198.t1;Parent=g14198;Name=g14198.t1 NODE_1373_length_11716_cov_39.2347 . five_prime_UTR 9063 9103 . + . ID=g14198.t1.utr5p1;Parent=g14198.t1 NODE_1373_length_11716_cov_39.2347 . exon 9063 10803 . + . ID=g14198.t1.exon1;Parent=g14198.t1 NODE_1373_length_11716_cov_39.2347 . CDS 9104 10231 . + 0 ID=cds.g14198.t1;Parent=g14198.t1 NODE_1373_length_11716_cov_39.2347 . three_prime_UTR 10232 10803 . + . ID=g14198.t1.utr3p1;Parent=g14198.t1 #PROT g14198.t1 g14198 MADGMPVHYELWRFVRATGDVDIEKDGTLAHRVHHKSGSGQHEPSNGKDLAALYSEFDATGVERNENVAVARNKSKSKKTSQLPAATDAGPIVDLSQLGDRERRRLENSLFGGCQEGDVRKVADACRLGARLEWRDAYGWTPLMCAAAAGSKDVVHHLLELGADVRATDEKGALDAVAVAYKCNHAHIANMILAERVRLELQEQGVAPVATSVPEDTNVGIPADGDPLVVCERCGIELPSSRARDHRYGTAHLLACGPADGAGAPSYAIAPTNIGYRLLVQSGWERERGLGPTGDGRKEPVRTVLKVDRGGVGVRGAPKARVTHFDAGDVGAVRTRRRVTARASLNTLPLTKKQIAARALKDKQWEADMRRHLAS* # ORIGINAL: g11329.t1 original gene structure, not modified by PASA NODE_4572_length_1449_cov_27.4374 AUGUSTUS gene 327 1344 . + . ID=g11329;Name=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS mRNA 327 1344 . + . ID=g11329.t1;Parent=g11329;Name=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS exon 327 447 . + . ID=g11329.t1.exon1;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS CDS 327 447 . + 2 ID=cds.g11329.t1;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS exon 642 798 . + . ID=g11329.t1.exon2;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS CDS 642 798 . + 1 ID=cds.g11329.t1;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS exon 945 1121 . + . ID=g11329.t1.exon3;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS CDS 945 1121 . + 0 ID=cds.g11329.t1;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS exon 1282 1344 . + . ID=g11329.t1.exon4;Parent=g11329.t1 NODE_4572_length_1449_cov_27.4374 AUGUSTUS CDS 1282 1344 . + 0 ID=cds.g11329.t1;Parent=g11329.t1 #PROT g11329.t1 g11329 LYELWKTGRYKSYPPNVLVDLVAKILALVPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALSRMKDLGVECRDVRTREVGIQEIHNKIRPYEIELIRRDYTANGGWETFLSYEDPKQDILVGLVRLRKCSETTFRPELKGRCSIVRELHVWIWQCRSNAQQGPDEVPTPGE* # PASA_UPDATE: g10928.t1, single gene model update, valid-1, status:[pasa:asmbl_996,status:12], valid-1 NODE_1261_length_12596_cov_72.2001 . gene 10770 12496 . + . ID=g10928;Name=g10928.t1 NODE_1261_length_12596_cov_72.2001 . mRNA 10770 12496 . + . ID=g10928.t1;Parent=g10928;Name=g10928.t1 NODE_1261_length_12596_cov_72.2001 . exon 10770 11046 . + . ID=g10928.t1.exon1;Parent=g10928.t1 NODE_1261_length_12596_cov_72.2001 . CDS 10770 11046 . + 0 ID=cds.g10928.t1;Parent=g10928.t1 NODE_1261_length_12596_cov_72.2001 . exon 11550 12496 . + . ID=g10928.t1.exon2;Parent=g10928.t1 NODE_1261_length_12596_cov_72.2001 . CDS 11550 12496 . + 2 ID=cds.g10928.t1;Parent=g10928.t1 #PROT g10928.t1 g10928 MAEEIGAVNEQIAAVEGLIVNVEKEISEVEGHLRNIGDALRDPSRAGEYAELKDNQAYYRDKESKLRDKESKLRDEKNRLRDEKNILLQRASAARLSQIDSVLEQNLVQATALRRGFRELRLSANDVARRRFSKIPAAYVWDERTESAQSDCYIAFIRSQISNAVPDHTFRVNKCQQNTHDISAEWLPADLKGCADAIVIDVGAEDSSLDVIRLCTRVAFELKKEGVKEAAHVRQGVGELVAAAAHSIYPVLHVLTDLATWFHFMWYELNAESERVFVVSETADRGVAWLFINSFLEASTGSTGVNWGEIFVNSASFVPVVMNTPVTSLNVATATGLPPVGSSIARLPLPPSSGDVGNVDDLLDCMSAEDARDTFMLNLYTEIRRSHFFADLFAPSHVRDTPEQMYS* # ORIGINAL: g10924.t1 original gene structure, not modified by PASA NODE_1261_length_12596_cov_72.2001 AUGUSTUS gene 325 1574 . + . ID=g10924;Name=g10924.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS mRNA 325 1574 . + . ID=g10924.t1;Parent=g10924;Name=g10924.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 325 575 . + . ID=g10924.t1.exon1;Parent=g10924.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 325 575 . + 2 ID=cds.g10924.t1;Parent=g10924.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 813 1574 . + . ID=g10924.t1.exon2;Parent=g10924.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 813 1574 . + 0 ID=cds.g10924.t1;Parent=g10924.t1 #PROT g10924.t1 g10924 FADRCMPRDVCRCVEDAITAIQHHFASNSASGCVLEGVQLATVALRCMSARALAPFDALASLSQYIAAAHVYVGAASWASIAEPTGVANSGDGIWGFLGQPESALPCVRFGFDELLFETVACAACSQPTAAAMIASVMLAWSTLRRCNSPVSCSPPIASTVPYVPPPHENTGYPGRSSVDSNLHKNVTSAVDALILCARLYDRASAGWSACDLYLRASELLAGIEPITCARHGRGLCLSSAACAALLSGDVVRCIRVSGCIKQALAEKDKEGGDATCDYCGDGDADDACCAVTLCGDMCDAYAAANWRWFDSWQPHMRHVTVGGIRDVYQVIRRLG* # ORIGINAL: g10927.t1 original gene structure, not modified by PASA NODE_1261_length_12596_cov_72.2001 AUGUSTUS gene 7004 9864 . - . ID=g10927;Name=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS mRNA 7004 9864 . - . ID=g10927.t1;Parent=g10927;Name=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 9821 9864 . - . ID=g10927.t1.exon1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 9821 9864 . - 0 ID=cds.g10927.t1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 9542 9725 . - . ID=g10927.t1.exon2;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 9542 9725 . - 1 ID=cds.g10927.t1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 8251 9205 . - . ID=g10927.t1.exon3;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 8251 9205 . - 0 ID=cds.g10927.t1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 7886 7917 . - . ID=g10927.t1.exon4;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 7886 7917 . - 2 ID=cds.g10927.t1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 7580 7768 . - . ID=g10927.t1.exon5;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 7580 7768 . - 0 ID=cds.g10927.t1;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 7004 7348 . - . ID=g10927.t1.exon6;Parent=g10927.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 7004 7348 . - 0 ID=cds.g10927.t1;Parent=g10927.t1 #PROT g10927.t1 g10927 MAKRTTGLDTAANDVLLRRSTYMAEHYVVRLKFLKSTHNLTDEVARNLTILIEKIGKLKTMAIPTLDESPPDIDLKNVDIVGRLAFKNAAPFWAAEVASEARDRGCDHKDTKKLACTLRLILECHVRQLAGALTSEELGTIRVFGLLISAYHAELVVAVPLIQSHDRGSRTSEASVTMATAFIEDCESLTICTTSTFVSASTVYGLRKLSQWCGHVANAGKHLRDLYVNAGDRLLPPPEKYAQGVVPEGLPTHVSLTPQKSKTQSSDDKGPSSGRQGGSTPRPPNDASERGTGEGRRTRSTPESSQARGTAPSGGKRACDSGIQGSLTGSSDAVDCAESLFCVTLSICDEARSSADTTCAVAAPLRGGWRERLFEAAVDAAGVSEQARRKVFQVEPPTLKSTPVMALCFLRDAILALSVLHAGGFVHRDLKLGCMMFDWELVRWRLVDFDLAVRVDERGAAGGSVGTKEYMAPETQRKNGHTTAASDLYCLGLTAGMMYAHASAVPDEEHDAWRVFIDTVVCMQACDPVKRGTTAEHLAKVKAELRRQTGNEDAPSLPLSMQWCAGERREERLQEQERALCV* # ORIGINAL: g10925.t1 original gene structure, not modified by PASA NODE_1261_length_12596_cov_72.2001 AUGUSTUS gene 2988 3374 . - . ID=g10925;Name=g10925.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS mRNA 2988 3374 . - . ID=g10925.t1;Parent=g10925;Name=g10925.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 2988 3374 . - . ID=g10925.t1.exon1;Parent=g10925.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 2988 3374 . - 0 ID=cds.g10925.t1;Parent=g10925.t1 #PROT g10925.t1 g10925 MAATSAALAHTDASADAGVCKGVPSASAASSPRPSVAETIVGSVAGEGSAGAATQSPDPSVRESTGSQRSAASGRRSSSGVPRVLGIFDRGSGRLFTRAEVREHATKESCWLIVGSNVYDVTDFLTVC* # ORIGINAL: g10926.t1 original gene structure, not modified by PASA NODE_1261_length_12596_cov_72.2001 AUGUSTUS gene 4135 5106 . + . ID=g10926;Name=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS mRNA 4135 5106 . + . ID=g10926.t1;Parent=g10926;Name=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 4135 4361 . + . ID=g10926.t1.exon1;Parent=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 4135 4361 . + 0 ID=cds.g10926.t1;Parent=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 4577 4836 . + . ID=g10926.t1.exon2;Parent=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 4577 4836 . + 1 ID=cds.g10926.t1;Parent=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS exon 4952 5106 . + . ID=g10926.t1.exon3;Parent=g10926.t1 NODE_1261_length_12596_cov_72.2001 AUGUSTUS CDS 4952 5106 . + 2 ID=cds.g10926.t1;Parent=g10926.t1 #PROT g10926.t1 g10926 MASQSPVSFSSRPIEVVVTHVVPFLCNKDLASLAGVNSVLRNGLRLKRTNNLSPAFSKQYWESAAFRNAVWADIPSGCYRVRDVSALGGVHSLNLSGCYRVRDVSALGGVHLLDLSSCKGLMDVSALGGVHTLDLTGCEGVTDVSALGIGQCLFAESLLLHWEVRVVSALGGVHSLDLSRWERVRDMSALGGVHTLDLTGCKGVTDVCFRRRP* # ORIGINAL: g2720.t1 original gene structure, not modified by PASA NODE_5534_length_812_cov_295.417_potentialcontaminant AUGUSTUS gene 267 812 . - . ID=g2720;Name=g2720.t1 NODE_5534_length_812_cov_295.417_potentialcontaminant AUGUSTUS mRNA 267 812 . - . ID=g2720.t1;Parent=g2720;Name=g2720.t1 NODE_5534_length_812_cov_295.417_potentialcontaminant AUGUSTUS exon 267 812 . - . ID=g2720.t1.exon1;Parent=g2720.t1 NODE_5534_length_812_cov_295.417_potentialcontaminant AUGUSTUS CDS 267 812 . - 0 ID=cds.g2720.t1;Parent=g2720.t1 #PROT g2720.t1 g2720 VHDIKPLSPAALQDAQHEHATQLKSTLADANTSAHASRSTQQAKTKERRDKTLRDVQYKRADLVWLYIPVHAKRGQTTKFQLCWRGPFSVLRRHKNNVSYDLANSIDPKHFIPIPGMKAAEYTTRRVHRAHVSRMRPFRARDPIPTDAPTLSQDILDALETEAPWNLRDVDSPIANAPDPT* # ORIGINAL: g8679.t1 original gene structure, not modified by PASA NODE_2062_length_7873_cov_37.6979 AUGUSTUS gene 3758 7781 . - . ID=g8679;Name=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS mRNA 3758 7781 . - . ID=g8679.t1;Parent=g8679;Name=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 7691 7781 . - . ID=g8679.t1.exon1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 7691 7781 . - 0 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 7399 7575 . - . ID=g8679.t1.exon2;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 7399 7575 . - 2 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 7060 7152 . - . ID=g8679.t1.exon3;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 7060 7152 . - 2 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 6682 6830 . - . ID=g8679.t1.exon4;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 6682 6830 . - 2 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 6000 6067 . - . ID=g8679.t1.exon5;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 6000 6067 . - 0 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 5418 5562 . - . ID=g8679.t1.exon6;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 5418 5562 . - 1 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 5093 5164 . - . ID=g8679.t1.exon7;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 5093 5164 . - 0 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 4697 4829 . - . ID=g8679.t1.exon8;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 4697 4829 . - 0 ID=cds.g8679.t1;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 3758 4452 . - . ID=g8679.t1.exon9;Parent=g8679.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 3758 4452 . - 2 ID=cds.g8679.t1;Parent=g8679.t1 #PROT g8679.t1 g8679 MVAAILLESGADPLLKTVDGAPPIKWAYDKGFDDIVEVLQRHVMRSGASGSFGVAPSPSSNGMTSPPAQVDSESYVTPSPLGKIRSVTKEKAEILQLRSSLTRNLQIDVNDIEFQEIVGTGSFGKVYRGLLREHVVAVKRLRTGSIRARSDIELFCREVSILSQLDNPNVRFCIVTEFVSGGSLHKILHVEKRALDPQAKLGITLGIARGMLYLHTLANPIIHRDLNSHNVLIDSATLLPKVADFGESRILRASASEEDMTKQPGNLRWMAPEVFAQGSKYTTRADVFSYALCVWELYSGCLPFEHLKPALAAAEMAYHNRRPPITPTLPRAIALLIRLAWQQEPTRRPDFGEVVQWLESNASNSHNNYASAVNSSPAVGALAGPSASASSQGVAMSPAQQAIPNGVHFGPSPYSSSNTFAAFETRLNGTEIVSMSADDSSLIGGYPDGNGKMIDALGRLRCNSNGYVRAGAVQYIPGSLSMPGGGVFASSPAGASHAYGSSPLLHKTYIPPSDQNKAYVPPPDQSGGSALHRGPNSGWL* # ORIGINAL: g8678.t1 original gene structure, not modified by PASA NODE_2062_length_7873_cov_37.6979 AUGUSTUS gene 260 3049 . + . ID=g8678;Name=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS mRNA 260 3049 . + . ID=g8678.t1;Parent=g8678;Name=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 260 1642 . + . ID=g8678.t1.exon1;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 260 1642 . + 0 ID=cds.g8678.t1;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 1955 2271 . + . ID=g8678.t1.exon2;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 1955 2271 . + 0 ID=cds.g8678.t1;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 2495 2635 . + . ID=g8678.t1.exon3;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 2495 2635 . + 1 ID=cds.g8678.t1;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS exon 2914 3049 . + . ID=g8678.t1.exon4;Parent=g8678.t1 NODE_2062_length_7873_cov_37.6979 AUGUSTUS CDS 2914 3049 . + 1 ID=cds.g8678.t1;Parent=g8678.t1 #PROT g8678.t1 g8678 MKSDKNRSSASQPVLMSKGASDNTHVGYDALPKETARVVLFQDSTDCLDGTDDGVVRGDADGSSDENSSDSTSHAETGRKNAKAARSMPELRTAKDCGDIPSDANAVRIAIDCFDALEVRGSQGEHTRAWPRDGDQAPDGDAVQKDTDGASAVEAAAAPSGEQSPLAPKARRTSLVASLLSSAKGLVGHIVPRKGPPTSAPTEDSARIERRTAKVARRIAVVNIMVVYMNAAFASVAAIIYAKLFSLPDWLMVCPKDLPYTQVYVAQGLAIPEALYKCTHWFPSILFERALACLSVQLISLMIGVVLCPGVPIVRRHLPVFFAFGSLNVIANIVPHLTGHADTIAPVFLVNVALSAAQLGIVVKWGRGRGAIIDSPARIVGLVVLIALSVVFVAIGYSWLVIDRVLSLQSFASLLAFRVVGHSVFEVLGTGALRTYTEVFLPHIPAHRAFVTWYWITLIMAVVGRLLMFQSTSLGQAVAMNILTAAVEVFFRRTYFYQRTLRLKLLRAAKRAHSRIGGHVTPFGSNGLLDMESEAALKRDLEIHAASVNTTAMVQIVASITSRVLARLFYESRAPCFARFEALHGSEAVDIANIIFMFLAQFVSDYYCTTWEQRNGIDLVSDNRRRPKWSTMVYCTFCSFALVNLMNYSFTRCSAGNM* # PASA_UPDATE: g8969.t1, single gene model update, valid-1, status:[pasa:asmbl_7260,status:12], valid-1 NODE_4374_length_1718_cov_35.3901 . gene 159 1718 . + . ID=g8969;Name=g8969.t1 NODE_4374_length_1718_cov_35.3901 . mRNA 159 1718 . + . ID=g8969.t1;Parent=g8969;Name=g8969.t1 NODE_4374_length_1718_cov_35.3901 . five_prime_UTR 159 159 . + . ID=g8969.t1.utr5p1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . exon 159 287 . + . ID=g8969.t1.exon1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 160 287 . + 0 ID=cds.g8969.t1;Parent=g8969.t1;5_prime_partial=true NODE_4374_length_1718_cov_35.3901 . exon 380 583 . + . ID=g8969.t1.exon2;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 380 583 . + 1 ID=cds.g8969.t1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . exon 820 887 . + . ID=g8969.t1.exon3;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 820 887 . + 1 ID=cds.g8969.t1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . exon 1010 1086 . + . ID=g8969.t1.exon4;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 1010 1086 . + 2 ID=cds.g8969.t1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . exon 1407 1510 . + . ID=g8969.t1.exon5;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 1407 1510 . + 0 ID=cds.g8969.t1;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . exon 1641 1718 . + . ID=g8969.t1.exon6;Parent=g8969.t1 NODE_4374_length_1718_cov_35.3901 . CDS 1641 1718 . + 1 ID=cds.g8969.t1;Parent=g8969.t1;3_prime_partial=true #PROT g8969.t1 g8969 RFSHFLKPTETCASSARSAINMALATKLSIADLDLKGKRVLIRVDYNVPFQDGKITNNQRIAASIPTLKYALDNDARSLVLMSHLGRPDGRPQPKSSLKPVAAELEKLLGRPVKFLTECVGPEVEAACEDPEPGTVIVLENLRFHAEEEGEGKDENGKKFVAKPEDVAAFRSSLSKLGDVYVNDAFGAAHRAHSSLVGIALPQRAAGFLMKKELDYFAK # ORIGINAL: g12443.t1 original gene structure, not modified by PASA NODE_529_length_21751_cov_43.3024 AUGUSTUS gene 2388 11991 . + . ID=g12443;Name=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS mRNA 2388 11991 . + . ID=g12443.t1;Parent=g12443;Name=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 2388 2435 . + . ID=g12443.t1.exon1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 2388 2435 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 2633 2749 . + . ID=g12443.t1.exon2;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 2633 2749 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 3044 3121 . + . ID=g12443.t1.exon3;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 3044 3121 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 3261 3396 . + . ID=g12443.t1.exon4;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 3261 3396 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 3577 3761 . + . ID=g12443.t1.exon5;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 3577 3761 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 4050 4176 . + . ID=g12443.t1.exon6;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 4050 4176 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 4451 4587 . + . ID=g12443.t1.exon7;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 4451 4587 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 4952 5084 . + . ID=g12443.t1.exon8;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 4952 5084 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 5317 5407 . + . ID=g12443.t1.exon9;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 5317 5407 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 5627 5676 . + . ID=g12443.t1.exon10;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 5627 5676 . + 1 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 5872 6681 . + . ID=g12443.t1.exon11;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 5872 6681 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 6867 7299 . + . ID=g12443.t1.exon12;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 6867 7299 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 7645 7747 . + . ID=g12443.t1.exon13;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 7645 7747 . + 1 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 7962 8049 . + . ID=g12443.t1.exon14;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 7962 8049 . + 0 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 8189 8288 . + . ID=g12443.t1.exon15;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 8189 8288 . + 2 ID=cds.g12443.t1;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 8451 11991 . + . ID=g12443.t1.exon16;Parent=g12443.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 8451 11991 . + 1 ID=cds.g12443.t1;Parent=g12443.t1 #PROT g12443.t1 g12443 MASGRGRGPRRLDVDMALANAVQLCDVGEIKALLATGADVNWQNPSEGYLSSLHKAVRHDRSDVLVHLIRAGGDIYQRDAMGRNLLHYASTCGAEACVKTLLDAGLPIDDLVDDAFETALMLAMKYGNIACARHLLSRGADTNIQTPSRKGVGGMSALHWAAHRNLPSELRFLVECGANHDLINEALQTPLLIAVDGGYAEAVEELAELGASTEGIDCAGNSAIHLALQKGRADILEIILRNSSVDLLDHVNNDGDCALVYAAKNGMVDCAHALITRGAAVNVGDTDGWTPLHWAALTDSHELATILLDAGASLSLQTANEHTTPIEVAEKNNSRRCVDLFVSRGKPSRAKPRSVRRSSTGSNGSEIVPTPPPRHSRRPNEPQSIDEVLGFAQQQPSYPFYQQPHPPYQPHPPHFQSPHTQSHSQSILQPPDVSMRQSSRKKRARGGPRSSSLVASMAASLLTPTPTTPGPVFPYPPSSSASMSRNPKAIRLSDHTERSVASMLAEQQYAGDDTAAQTYYNDQRRILAEFAKRQTVRATVPPPLAAAGGRSRPTTPRLEPIARRPSQEAQLQGSQSQHQLQHQQRSQRPWSASSSASREMPQAAQPGYQSMTDGAFADMFSGTSGGSWRESIDGPYGAAAADLSFSAPQSILKKSGVNASRVRPSSARRYSDASATASSTTPGTSSKKRTRPQSASGVGTLTLDDDALLSAMWAPHGVQSNIALATAASGAVFDPLASLSPPASRPTSPRGRSHNMSGQCSPTPRNDMHRAVCKGHTHEPLKHFPEKIFPKVRFADETMTDALRRKFDADVRTYMKSHGGHTREQLATQVTLLRGMGSPEPGYVDDAAIPDDEYSQWGMDDLSQLMGVNEHSKRVSFQGDGPTRPEDTDPIDPVLGYPIRSIHRIAARVIQRSYKLYLFRRRRDDAAHVIQSAWHGYSARKEFELSALQFDSATLIQRTFRGYLCRREYRRLRSCTITIQRHYRGYACRTKYRCLKESVVLIQSHARGALVRRVTANLRVQWRAAVAIQSAFRGYVAREGYREILTSVRKLQRWYRHQLARAAGRRERARIVLERRERAATLIQATYKGFLCRMGYQEARNAAVCIQTWFRMERQRTRFLRMKWAAIVIQSAVRGWSARKKVEQMWGEQRLEETRNELNTQLAELRRRSAARAIARWYLGHVNRNGGKKDTSADVNEAAIVLQKYARGMLARIHVRRLRAEWEKAAAVVRRGIIRRRLSKKQLVDAQSPNVTQTGTATAVGNASAASPHAVNGAVVAAAVDEQAAEMVHGAPGVRSGTHTAVSAAVDEQAAEMIHGALGVSRGTHTAVAAAVEAPGVSSGTHTAVAAATVDAAQSINTNSGVSTGVHATGDKHSIDIKINLTDDVNNTVDIDIGANTVNNANAAEVAGTGQTSAVGANIVKNANVAEVAAGNVHAAEVAATGQTSAVGANIVKNANVADVAAGNVNADEVAATGQSSVVGANTVNGPDGDDQTGDSGSYTGTDSSENDDDDDGGSGESESGSSDGEESGVATSDTSEDGDAHEERTAAGAAGADSGAAVEGSIEAVEKPRSQTADAQESLRNDGVDVQQETNANGLVATVSADAQIGGSVEGPMASPATETKPTNEGQAAGSDGDDGTSESGSDEDGSSSEEGESLPGENDEGSEVTDSDGDDDGDDADGTSDSGSSESDEEGSSPSGHGSAAQESKSASPDEKHTLPTEKNIAAVIDIAAATSAPRIPSVQLEAHDEQVRAAVVIQRHSRGFLARKKVAHIKLARSKSFGDDQVAGAEPPAADDAVQGAVQKPAIAAIVAVKNMADARDSALPRDSRNASPTGSRASIRSGADRAPREPKSERRHSAEADAGKRRHRNDDKDDASSQRSVTIRDRPNVPDGRDLQREDRAHANDARREEEREDRERRHAEKDARRQRRHEDRLQRAAEEEERRRREEKLARREEEVRREKRALEAQRLADLEQKDKWELEAKLGFVPEYATGFPMPPEKEATEIRALLGQVQAHTEMREKRQREVEDEMTKAHRRKESAKNALPKALKNLKSILLKA* # PASA_UPDATE: g12442.t1, single gene model update, valid-1, status:[pasa:asmbl_7980,status:3], valid-1 NODE_529_length_21751_cov_43.3024 . gene 629 1799 . - . ID=g12442;Name=g12442.t1 NODE_529_length_21751_cov_43.3024 . mRNA 629 1799 . - . ID=g12442.t1;Parent=g12442;Name=g12442.t1 NODE_529_length_21751_cov_43.3024 . five_prime_UTR 1736 1799 . - . ID=g12442.t1.utr5p1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . exon 1624 1799 . - . ID=g12442.t1.exon1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . CDS 1624 1735 . - 0 ID=cds.g12442.t1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . exon 1319 1386 . - . ID=g12442.t1.exon2;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . CDS 1319 1386 . - 2 ID=cds.g12442.t1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . exon 1121 1223 . - . ID=g12442.t1.exon3;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . CDS 1121 1223 . - 0 ID=cds.g12442.t1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . exon 905 995 . - . ID=g12442.t1.exon4;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . CDS 905 995 . - 2 ID=cds.g12442.t1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . exon 629 800 . - . ID=g12442.t1.exon5;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . CDS 761 800 . - 1 ID=cds.g12442.t1;Parent=g12442.t1 NODE_529_length_21751_cov_43.3024 . three_prime_UTR 629 760 . - . ID=g12442.t1.utr3p1;Parent=g12442.t1 #PROT g12442.t1 g12442 MSETGRKPLAAARVYLDQNKIMPLLENMTAALVYKRPENPMEFLAKYLESLKEHREDPEVVDPPCLFEEENLISTFGIFDVTKRGMLTHTQYKEAMASLGISAYNQMPEGSGADKINQNTFVKEASVGLRKAVATFK* # ORIGINAL: g12444.t1 original gene structure, not modified by PASA NODE_529_length_21751_cov_43.3024 AUGUSTUS gene 12666 20971 . - . ID=g12444;Name=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS mRNA 12666 20971 . - . ID=g12444.t1;Parent=g12444;Name=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 18876 20971 . - . ID=g12444.t1.exon1;Parent=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 18876 20971 . - 0 ID=cds.g12444.t1;Parent=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 18112 18542 . - . ID=g12444.t1.exon2;Parent=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 18112 18542 . - 1 ID=cds.g12444.t1;Parent=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS exon 12666 17767 . - . ID=g12444.t1.exon3;Parent=g12444.t1 NODE_529_length_21751_cov_43.3024 AUGUSTUS CDS 12666 17767 . - 2 ID=cds.g12444.t1;Parent=g12444.t1 #PROT g12444.t1 g12444 MGVVAELLECTNEPCPHKPVSLSASDLATVALSEDGAVRAWGIRSDALHEFPRTARPTVRVGNHVRVPVSSGEQAGCDNHVAFGFASGTPHLHATTNKSNNDRSSINNNDDSNNTNTNTNTNNSDNTKTNNTNNSSSISLPPAITLLGDTIRFSEFGRVLVESSTHTPAARPGGYPTAFGPGWQSRIHESLCVGGTFSTKTTETLPHVIPLVQSGCKTGVVIALVGLPPNESAVVLLDRHPTDTASTDTTDSESYTLHAHSLKSDVVSFLTQDVSVIADDLQRRLLRGGLMHVEDLASSAGFSNAIVVAATPAWDGVHVTFARKGHEEKDSKLYHCVVSFESFVATPSPPQSNQRASGLVLSVVTALSMRDSTKTAPGDVLMSVCGSTATVLHKVSRALITLTLTGRDDEPIAAMRHHAPVVHVSVWPGYSKSSRSDPNHNNSKVTACGICIGDTSLAHVVGSGSIDKVRNALASLDPSSPDSVAAFLHCSPSGNLLHSLVDASCAREVLRHPIASARGHLSFLTAFRNDAGLLPIDTALRRGGDLAQILTVEFGLDSASVGASFGALVCDAATSFMHMRVPESDDTGTEVQRKLRITDVSELTPTGPSHSLAYTRSGCVSLKCRPVEASRGASAQSKAQGMGAVSATNASGASVSSCQRRISGGFRADFMFTVGGPSQTRANSVMAFAIFGGNTGGVSLAACKYDTLKRQEFYRNALGTSVVVEMDWGSQSSNNSSFVRVFVCDSSGSCSILASSSARKPGASFADGSPHDITVTVDKDQTLAVFVDGDGVISAPLADTHSSSAHTQSAFVRWQTAGALSVGFVSPPDCGGHVDVQRFELIGFHGNLKFRDSGVQVFSKRVVGAKSHGAFICAACQRTCNCGVEYCKCNCCHIRTFSPPPLERASSHLWITESTDIGRMSLFELMPRKIRHIPATSLTQPDTKAVGATGASPTAPLTSAVTSAPPEIAVASIPATSTTLPLFASLTAGAPPPQQQQPPPPQGPLFASNYIQGTTPSQAFPAMQFQFSTPSGSTTVVNSSLGIASVTMNNASAPVPSPFAAAFSSQPVVHTAAPTVHDPHPFSFGIGTTANAADSAFWRTNRGHRSIAAKKTAHKSGRAAGIVPSSFTGTASSSSDTVTWDPATVIGTAGLAEKSDESIGTAAAHVRPKTEHPLPIAAPKTLAGLLKSEWDASVPLSTGDTRLTILTQVPAAVIHKIFKTNDESAPPPWSESSPLATAVLSACGSEVPLGPDTPIPLAALFGVDCLRAALDKIELRRRVHDHVTWMGSLPSVVIQCVVAIVDASANKSTETVERMVGTVDALWRAAGTQMNSMAGMRACGVTESDFDRLFLELHGVTKRSAVFARAVTKVLESDSDWLRRSVVHMYAPLLSDTTQWRGIVNTPPPISDGAMSLWDVHVEQMRINPGRQGNLLHDMCLPPHSDTAASSLAAMRTLLGECSVGCTKRREGNEGSMTRSPLCLPVYQCSTCDITICNSCTLQCHEGHLTFPLPATECLGVAKTACACPAPEGQYHRTLPVSPLNSLDMGLLRARVLSWGVALRGKDDQIALSAHPSMRLLTMTDDRGQTPVIAALSRGQTDYACMLVNIFVSLCQGVAAEDRAKLSDSAFLSADERGNNALHTLMTCAGWVVSSGDGRRWCETLRGIRASLDDWQWACALSAANIVGLRPMEVLVHAVLVGSDSAGDHISAELLSDPSLLTAGLDCFVADGIDNTRGTMPIDFLLRSLLVGKQPNLALTGIVVASVRHSLDADIREYFVRSTARILVAFVLAVEQLAPSDFVLEPFKLLFSASPVHACKTLCELARAVLAPIISGTIALCPILPSNNNNNNNNNNNNNNSASGALSSTGDRTLPANQPLFSFGGATTANVNTAHVFLPQLSNVNVLARTYGRIMRIAVDLHAEMMRNVQVNVPVEKGELAGGARDAALHMLAGALGDGWSFVSRHLDCLEPNLCARSRSHAPLAPVSSMADLVYFLATNGNEVPLPLPNGASLDKLGNHPHLAYILDACLYALTVSPSAMALVNPAEDIRAHSGGSESENGEAVDDFFRSDAFYDGNGPLLSVDAIRTRWPESTAALATSCVRTVMLESRGALISLATRSVLSAASETAKRELSVRQSGDVALKVDRARVLETSLPLLQSIRTPVRVVATFDGERGHGTGPTREWFTAFGAALMESFSGGVAATNIPRASAPIGLPLFVRAENLSTIVPSAVPLDLWKPLARAVYRSAGKFLAIALVNNTVISVVPATHVLKYALGHRLGMADLAAYSPTRHDSLVRLLTMSDDELKETGITFVAPLSEFEGGGSINLLASSGMDGSSVHVHRGNVHEYVRMHAQALLVGRIRKELDEIRRGFCEIISPASVAPIPLPAIIAMMCGSVSMSAQLLKSACTLSIDSNVTDAELVRVRGWLWAAFDKMTGTERNAFAQFCTGSPIIAPGTMIHVTVCKCSVSHESWCESAVREEASASRRRNTQPHRGGGRAHNNSCAHFPVAGVCGTSLRVPVYASENVMMDKLRMAITCVTFEMA* # PASA_UPDATE: g7066.t1, single gene model update, valid-1, status:[pasa:asmbl_1582,status:12], valid-1 NODE_1437_length_11287_cov_88.252 . gene 1353 3305 . - . ID=g7066;Name=g7066.t1 NODE_1437_length_11287_cov_88.252 . mRNA 1353 3305 . - . ID=g7066.t1;Parent=g7066;Name=g7066.t1 NODE_1437_length_11287_cov_88.252 . exon 1353 3305 . - . ID=g7066.t1.exon1;Parent=g7066.t1 NODE_1437_length_11287_cov_88.252 . CDS 1758 3305 . - 0 ID=cds.g7066.t1;Parent=g7066.t1 NODE_1437_length_11287_cov_88.252 . three_prime_UTR 1353 1757 . - . ID=g7066.t1.utr3p1;Parent=g7066.t1 #PROT g7066.t1 g7066 MGLTHNPALPVFSGIVIAYFGGLSWTLTLALLAVAAACAGGIVYRNRILAKAEENAGIRKLRARRQRNMSFISELCARGAYPSAYHIPQPIINGVLYFDNLPSVDKIKLALKDGLLPYLRFRASAVIDTEMGKATFEETEVDLDKHIFEISVENDIELMEHIDRQTVSDLRVETGRPLWEVHVVRNKSGGSVLVGRVHHAIGDGLSLVSVFMSLFTDANGEPISLPAFTRPHRSRASLLSKVRGAITMAWRFLRALAKVLHIPVSAADSPHSFRDNTTPWRWTGRRRTVLFPRVELATIKAIKNASHGSTVNDVMTSLLAGTIRRYLELQDDSLLSVRNGADIHVRALLPYAFPRKSGPVDKEEALRNLWCFISLRMPVEVPSSDPVGRLRTSKARLDYIKRSPEAHVQLSVQELASSVLPFEVQAQTGLDLISKHSVTFTNVPGPSTRIYFAGEPMRDFQCVIGHITNMASAFSYNGHVSFNIVVDDSIVKDHAKLPELFLAELSALKAALNVQ* # PASA_UPDATE: g7067.t1, single gene model update, valid-1, status:[pasa:asmbl_1580,status:12],[pasa:asmbl_1581,status:12], valid-1 NODE_1437_length_11287_cov_88.252 . gene 3983 11213 . + . ID=g7067;Name=g7067.t1 NODE_1437_length_11287_cov_88.252 . mRNA 3983 11213 . + . ID=g7067.t1;Parent=g7067;Name=g7067.t1 NODE_1437_length_11287_cov_88.252 . five_prime_UTR 3983 4078 . + . ID=g7067.t1.utr5p1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 3983 4372 . + . ID=g7067.t1.exon1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 4079 4372 . + 0 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 4587 5484 . + . ID=g7067.t1.exon2;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 4587 5484 . + 0 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 5873 6053 . + . ID=g7067.t1.exon3;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 5873 6053 . + 2 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 6249 6357 . + . ID=g7067.t1.exon4;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 6249 6357 . + 1 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 6631 6745 . + . ID=g7067.t1.exon5;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 6631 6745 . + 0 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 6996 9312 . + . ID=g7067.t1.exon6;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 6996 9312 . + 2 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 9576 10307 . + . ID=g7067.t1.exon7;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 9576 10307 . + 1 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . exon 10810 11213 . + . ID=g7067.t1.exon8;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . CDS 10810 11125 . + 1 ID=cds.g7067.t1;Parent=g7067.t1 NODE_1437_length_11287_cov_88.252 . three_prime_UTR 11126 11213 . + . ID=g7067.t1.utr3p1;Parent=g7067.t1 #PROT g7067.t1 g7067 MATALAIGVASHAVNAAIHGNVDELRVLFRRFGQASSSDDAGASQPSASSTASRLPNNGAIFNVRDARGRTPLHMAASYGQLDALDWLLNHGAACDIQDTESGWTALHRSLYFGQLSTALRLIAGGAGLYVRDKDDMTPLDIVTHNRILFESGAYVDADARAPWLETDSGDTPDLRVLGRNRTVSASSEADDGPTTRSRDRPSHRPYVPERPPGGATDSSLYLVTDVYSWGPNNANYTLGHPDADGRTHPQRIEYFFRVCGRTPVVYIVTAKLHSVFLLADGTVHTCGFGRGGRLGHGSEDTRVTPAAVLGVRGRVGSVAAARDHTACVTLHGDIYVWGRNDAGQLGVPGTGDMSLVPLQVKVLKGKGIEGVACGRAHTAVFGRRALYTWGQNKGQLGHPKGEEFQFAPRLVASIDSDRCGPIAFVAANELVTCVLSSSGDAFVLSNFNVVRIPNVGSRFPQNMPVHRTERQLISRVIAGPDKLIALITAPAGEVFVWEPDMPAPTPLLWLLHRQLCVVDLSLGISKIAIVTDTGSVYTGVYRNADTKAIRKGGCVQLERVRNQHGIARISCDMRTEHFVSIRREPQAPVAVRYPRPSPPTLSTDLANLLTTAYEGDGISDVVLTTSDGMTLPAHSVVIASRSARLADEIRRASRDSGAGMGGGVASIVLDASVDFDVASLLVQVMYTGTCSLFAEEDTGRNATHNGNNNNNKKFYGSCGEDGDSDVNVNAEEVEDGYGIGGPRSEHAMRLLREREDNRKRNAIAARKKNAKGKKKKSSSTATDGRLGSKKEDVDVDTELHALPLEERLTNAAKAYGITLPPAFDRSALTNPSYLRIDRTGHVGREFADAVLVVDLKDPSATEQPDTSGLLDGAATTHNDLENAGVCDYVDGDGIAYFRCHSALLGCRSDYFNASLSLKWREDPRPPIDSESLSQMCARDADAARLTRLTLPAHFGSRAVRCVLDFIYGDDGSTLDVVTTHDVPFLFEVMAAASSLLLTRLVELCEAAIACRMDLRSIVSIAGAAEAYGVVDLCSASVGFILRNAEPLLESRVLDALPPGVMDDLVAAFAGAVPSVPAEAISRQPDAQQCWEEREDAENGGSNIGQTSRRVRRKSGRRTSSECVADGDSAAMSISLSVSVSEEVGPFIQLDEGVDRVRSNSAPVSHSTVMDDCDGGLPSMIPDHALCGDEGPAHVVSTSAVSVSVDVGVSPVDTRTRAMDALFSGSAGGMGSAKGKKRGKGVKESAEVPVDKHVTGGASAVTGVERETEVSLKRDLVAGNVTSVSDSGAVAMPPVAVAWAAKTAVPAVQAVSLRSIMATEPSPAHSHVIKQSVARSSAPITPAVETPPLHSLRPSVVSAAPVTVATPLTSTSAVNPLEDALSALLIHGTPARHLSQRERKQLAAAALAAAKLDAEKRVEDTTPAPVTSRPAAWGRAAGAAVDGTVPKPGQPPQTTINSGAGSAVAADPPSLRSILAEEERRAKSAPVVGQSVAVSRGGGTALSSHVPSGQRGPVGGNERKTAKGEHPSAGSAGNASLGLADDTDGPSTPVLDLGAVLSRFHSTSTTAQLLTKSSSPVTPSVAPPVRPASVSLHTIQQQQSRETVLLHRNARKPLHIIQTEELAVAQLRALYRGDDVAASEEDFLSVEVERLQL* # ORIGINAL: g7065.t1 original gene structure, not modified by PASA NODE_1437_length_11287_cov_88.252 AUGUSTUS gene 695 1067 . + . ID=g7065;Name=g7065.t1 NODE_1437_length_11287_cov_88.252 AUGUSTUS mRNA 695 1067 . + . ID=g7065.t1;Parent=g7065;Name=g7065.t1 NODE_1437_length_11287_cov_88.252 AUGUSTUS exon 695 810 . + . ID=g7065.t1.exon1;Parent=g7065.t1 NODE_1437_length_11287_cov_88.252 AUGUSTUS CDS 695 810 . + 0 ID=cds.g7065.t1;Parent=g7065.t1 NODE_1437_length_11287_cov_88.252 AUGUSTUS exon 971 1067 . + . ID=g7065.t1.exon2;Parent=g7065.t1 NODE_1437_length_11287_cov_88.252 AUGUSTUS CDS 971 1067 . + 1 ID=cds.g7065.t1;Parent=g7065.t1 #PROT g7065.t1 g7065 MMRLTRLIDKAGGYLYGDIDSFGSIMKTVLTPDATSYYDNLTVQERYMRDDNNSDTTNGASQGDANPATV* # ORIGINAL: g7317.t1 original gene structure, not modified by PASA NODE_1955_length_8362_cov_40.7186 AUGUSTUS gene 1856 7109 . - . ID=g7317;Name=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS mRNA 1856 7109 . - . ID=g7317.t1;Parent=g7317;Name=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 6836 7109 . - . ID=g7317.t1.exon1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 6836 7109 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 6586 6731 . - . ID=g7317.t1.exon2;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 6586 6731 . - 2 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 6243 6379 . - . ID=g7317.t1.exon3;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 6243 6379 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 5871 6006 . - . ID=g7317.t1.exon4;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 5871 6006 . - 1 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 5592 5632 . - . ID=g7317.t1.exon5;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 5592 5632 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 5182 5360 . - . ID=g7317.t1.exon6;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 5182 5360 . - 1 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 4746 4921 . - . ID=g7317.t1.exon7;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 4746 4921 . - 2 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 4445 4550 . - . ID=g7317.t1.exon8;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 4445 4550 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 4150 4284 . - . ID=g7317.t1.exon9;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 4150 4284 . - 2 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 3798 3852 . - . ID=g7317.t1.exon10;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 3798 3852 . - 2 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 3189 3408 . - . ID=g7317.t1.exon11;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 3189 3408 . - 1 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 2844 2928 . - . ID=g7317.t1.exon12;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 2844 2928 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 2311 2615 . - . ID=g7317.t1.exon13;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 2311 2615 . - 2 ID=cds.g7317.t1;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 1856 2161 . - . ID=g7317.t1.exon14;Parent=g7317.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 1856 2161 . - 0 ID=cds.g7317.t1;Parent=g7317.t1 #PROT g7317.t1 g7317 MYHELLLAMSGYPGDVFIEVDGVDGVDGGGIFVSEDLPFLTESERAILNELCSLGHMVRSLEAFSTRCESVSRPRVTALVHGQYAKAAAMKDDSGLYLRAFANGLERVLTPYHALIVDTEQDVIADPALPVTHLLHKFREFKLLLPALMALVATIDAKKIRGCALLELIHQRSMCGIPNVQSAMSELLRTCHGVLYRQLSAWVVYGVLLDANDEFFIRRQSPLSNASDQTKLQESHGEDASSTSWLGAFSLRLDMLPSYIPLRVAGKILFVGKAIQLVSPSSPSRDKEGAALNSKGKWTKISPGPSVSADEEKMFLSLIADLNNRADFDATAFETAVDQIRDAVARHLWQLMMTEADLMGHIRAVKDYFLLGKGEAYMAFFDLGRKLLAMPPTNTFESDLNSLFQSAIASVSTGHADEDNARAFRLVLEKDEDFPSDKDARAKQGRTQADLWPRIGMEYNVRYNGLFRFLLVAKRTQIRLQSLWMHQMRLEGRGGRSNDGEPTPDELGLASTLTAAWRLRNSMSFLVDNIQYYLQVDVLEVQHAQLEQSIEKTRDFESMLKSHESYVNALMSQCFLLSKPVSRLLHEVFDLCHSLCDAYLSASTHLDDLHRYREQREARERQRSKARTSHQQQQQAQPPAALEPPTPSPALPTPLDRASLASLQKTFDRQVGFLLRMLSGVRGAQYSPHLAQLLLRLDFNGYYAGLLSSVGGQAQPSHSHAVDVGARAAMAVASVGASVSDASAYGGMSAMQQQMLAALEPSRIDK* # ORIGINAL: g7316.t1 original gene structure, not modified by PASA NODE_1955_length_8362_cov_40.7186 AUGUSTUS gene 439 1679 . + . ID=g7316;Name=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS mRNA 439 1679 . + . ID=g7316.t1;Parent=g7316;Name=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 439 885 . + . ID=g7316.t1.exon1;Parent=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 439 885 . + 0 ID=cds.g7316.t1;Parent=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 1043 1193 . + . ID=g7316.t1.exon2;Parent=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 1043 1193 . + 0 ID=cds.g7316.t1;Parent=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS exon 1510 1679 . + . ID=g7316.t1.exon3;Parent=g7316.t1 NODE_1955_length_8362_cov_40.7186 AUGUSTUS CDS 1510 1679 . + 2 ID=cds.g7316.t1;Parent=g7316.t1 #PROT g7316.t1 g7316 EPAPWTAAGEKRTAELGLQMVFPEGYVEKTAEKSPKTPKTPKRKSANGEGEEGAGDHDPEQEEGESSVKKRRRSAKGQTSTDADTAAHTGKDAREAEAVAGEKKAKCGRGQKRKAANGSTAAGEDETGGVKGSPAHKRAKVDMPADQRTLCLSDSANIKTWKELIRLYTDEGELRFLEKVSDTFTCGVCQELLREPVTTACGHNGCRQCFRKSVKEYGPKCPYCRTDFDSKDLALNSGLDAILRALLPSYAARSK* # ORIGINAL: g9362.t1 original gene structure, not modified by PASA NODE_1000_length_14904_cov_63.4346 AUGUSTUS gene 4973 5848 . - . ID=g9362;Name=g9362.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS mRNA 4973 5848 . - . ID=g9362.t1;Parent=g9362;Name=g9362.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 4973 5848 . - . ID=g9362.t1.exon1;Parent=g9362.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 4973 5848 . - 0 ID=cds.g9362.t1;Parent=g9362.t1 #PROT g9362.t1 g9362 MEKVDHERLRIFVRREYSAILRANPVYQTSPPKPSSAWIADHVLPAITTVLSKIPSNEVAEHVRTVVYNKYVYSKGREQKKSKATLRYHKIKAAMAHTHDSSAIESSKPTEQNVQTITSTSTSMDKGDDSISPAVSFSASLDVGTHSQATHCGDKENPTFLDKGNDSILSAVSFSASLDVGTHSQATHLCGDKEISTFLDKGNDSILPAVSFSASLDVERTHSQATHLCGNTEISTFLDKGNDSILPAVSFSASLDVGLTHSQATHLCGDKEFSTFLYNGTHSQLSLNTLL* # ORIGINAL: g9361.t1 original gene structure, not modified by PASA NODE_1000_length_14904_cov_63.4346 AUGUSTUS gene 1959 3800 . + . ID=g9361;Name=g9361.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS mRNA 1959 3800 . + . ID=g9361.t1;Parent=g9361;Name=g9361.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 1959 3800 . + . ID=g9361.t1.exon1;Parent=g9361.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 1959 3800 . + 0 ID=cds.g9361.t1;Parent=g9361.t1 #PROT g9361.t1 g9361 MANSEQWSTCDLLAFRAAVQGDECARPVWKSAVIVCREARQAYAALATPKRYEAVLNIFATVWKEMSRIPECDPLHLPPIYYAEAAVLKELLIALVGSFVERDQRNEKFDCDHAIIGGVEGTGKTTIVKALSIGALACSPTYFFVYIDYTDIPDHLFCSNSLNLLLWEVVERVTTKNFAGEFGSLNVSSTDGVMDALRHNGLDIGVIADEMQLLFRADEPDGSPRVAMVRALHKFARTINKSLVVLTGSSADLRTRLLKYGPENEVQRFRAYHNFNNSLCTFYHVGALRTVESLKSYLGSRYPTRQFDDADVRKLLHETGGICRLVHAIVGCSQADGKKRPSLRRLTPELVKSPANGFVVAAHIIRISQGKALSVALSGPAPVYLVPNQVGVPLYDLVSQLCCALSITREESTRRICEWIDGGLLYATSACDLVTDMAQDIQLARPIDALTYYKTSMSSEDVVAFRQSLEMVYANGVNAGTVFEDFLRPRLANCDDFAAVLGRFSAHVISVFDGELLVDDCEATADVLGELDGCYCRWTNEIGLDSVAFRFVDGGRTLRLSGWQNKGGHKAKPKDKAGIGGGVISKCRTQTSDVINHYSMAGIIMLAERGFEN* # PASA_UPDATE: g9365.t1, single gene model update, valid-1, status:[pasa:asmbl_1,status:12], valid-1 NODE_1000_length_14904_cov_63.4346 . gene 12316 14771 . - . ID=g9365;Name=g9365.t1 NODE_1000_length_14904_cov_63.4346 . mRNA 12316 14771 . - . ID=g9365.t1;Parent=g9365;Name=g9365.t1 NODE_1000_length_14904_cov_63.4346 . five_prime_UTR 14735 14771 . - . ID=g9365.t1.utr5p1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 14710 14771 . - . ID=g9365.t1.exon1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 14710 14734 . - 0 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 14528 14600 . - . ID=g9365.t1.exon2;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 14528 14600 . - 2 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 14364 14438 . - . ID=g9365.t1.exon3;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 14364 14438 . - 1 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 13998 14188 . - . ID=g9365.t1.exon4;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 13998 14188 . - 1 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 13395 13648 . - . ID=g9365.t1.exon5;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 13395 13648 . - 2 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 12772 13143 . - . ID=g9365.t1.exon6;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 12772 13143 . - 0 ID=cds.g9365.t1;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . exon 12316 12513 . - . ID=g9365.t1.exon7;Parent=g9365.t1 NODE_1000_length_14904_cov_63.4346 . CDS 12316 12513 . - 0 ID=cds.g9365.t1;Parent=g9365.t1 #PROT g9365.t1 g9365 MFQLLRTPGPARQGLSSLNVGAWRSYVAPASCRPKTAIVMMNLGGPEKQDDVHGFLLRLFSDRDLIPLPAQKYLAPWIARRRTPKIKEQYAHIGGGSPIRSWTDLQGREMVKLLDQLSPSTAPHKHYIAFRYAEPLTADAMAEMSRDGIERAVAFTQYPQYSCSTTGSSLNEIYRQTAAQSGSAAAAKPLQWSTIDRWPTHNGLVKAFAENVRAALDKLPASKRSSAAILFSAHSLPMGVVNRGDTYPGEVAATAHAVMRELGNSNPFRLVWQSKVGPQEWLGPRTDEAIEGYARLGVKNLVLVPIAFTSDHIETLFELDHEYIDLLSKKVGMETVVRAESLNASKTFIKALADIAAAHLASGERSTNQLALRCPKCVNDTCGKMRDMFVHGSVA* # ORIGINAL: g9364.t1 original gene structure, not modified by PASA NODE_1000_length_14904_cov_63.4346 AUGUSTUS gene 9190 10193 . - . ID=g9364;Name=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS mRNA 9190 10193 . - . ID=g9364.t1;Parent=g9364;Name=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 10065 10193 . - . ID=g9364.t1.exon1;Parent=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 10065 10193 . - 0 ID=cds.g9364.t1;Parent=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 9565 9766 . - . ID=g9364.t1.exon2;Parent=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 9565 9766 . - 0 ID=cds.g9364.t1;Parent=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 9190 9371 . - . ID=g9364.t1.exon3;Parent=g9364.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 9190 9371 . - 2 ID=cds.g9364.t1;Parent=g9364.t1 #PROT g9364.t1 g9364 MHDMLSANIIGKALSCAISSGVLVSTALRHLACSYVDGHDTEWGTTPWAVPSGAGNGTCDATLTEWPHISEDTHAVYCGECHWISGLEHAVKRSVLEIICGCGWLRVDASSVHALRLPSRRGVKMCGADMRVTVRASVSGRRGRCTSRSQCRKNGGDPTKELDDNWPGST* # PASA_UPDATE: g9363.t1, single gene model update, valid-1, status:[pasa:asmbl_2,status:12], valid-1 NODE_1000_length_14904_cov_63.4346 . gene 6988 8585 . - . ID=g9363;Name=g9363.t1 NODE_1000_length_14904_cov_63.4346 . mRNA 6988 8585 . - . ID=g9363.t1;Parent=g9363;Name=g9363.t1 NODE_1000_length_14904_cov_63.4346 . five_prime_UTR 8492 8585 . - . ID=g9363.t1.utr5p1;Parent=g9363.t1 NODE_1000_length_14904_cov_63.4346 . exon 6988 8585 . - . ID=g9363.t1.exon1;Parent=g9363.t1 NODE_1000_length_14904_cov_63.4346 . CDS 7412 8491 . - 0 ID=cds.g9363.t1;Parent=g9363.t1 NODE_1000_length_14904_cov_63.4346 . three_prime_UTR 6988 7411 . - . ID=g9363.t1.utr3p1;Parent=g9363.t1 #PROT g9363.t1 g9363 MDARAAMLMFPDVRAALADGGGPAADALRAQQQHHDRALKSDIAALNAERRSSESTNSIQQAMLTRRLKALEEGKRRSSLSCEGQFASAPNINQSSTNLERTPSSDLLVRRSSSVRSMHIIMPSQAGQQKGIVSAPVQQSDADPMGSLSLPTMKPPPLSAPAQPSERRSMLASASGGVLLSASESKHRSKSPGGDAHASAVPSHCGIMRSMSATFVTKKASDPTQSASGDPQTSGDSSAASSIPVSRPWYLEKLALRSGISLKVYEELCKESTERSSNRPSSAGPSPQKKQTRKGVPAAPTVGSGGDGDDIDSAPLSTDSPVKRSGLLRSQTFTIAANRPSLKVGDAEGARRCSEGDIL* # ORIGINAL: g9360.t1 original gene structure, not modified by PASA NODE_1000_length_14904_cov_63.4346 AUGUSTUS gene 713 1093 . + . ID=g9360;Name=g9360.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS mRNA 713 1093 . + . ID=g9360.t1;Parent=g9360;Name=g9360.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS exon 713 1093 . + . ID=g9360.t1.exon1;Parent=g9360.t1 NODE_1000_length_14904_cov_63.4346 AUGUSTUS CDS 713 1093 . + 0 ID=cds.g9360.t1;Parent=g9360.t1 #PROT g9360.t1 g9360 MDRLPIMRTRADATACPFNEENLAMRIRDIAREKMESEWAGIHALWLCSKYSERKTVQPGDRLLVACACLAIASTFAVCELGPYEIGDLYGYSDRRLEEAMKDVAEVLEYDVLSVPPFSTVGQASI* # PASA_UPDATE: g13243.t1, single gene model update, valid-1, status:[pasa:asmbl_1688,status:3], valid-1 NODE_1469_length_11097_cov_40.5236 . gene 5157 6716 . + . ID=g13243;Name=g13243.t1 NODE_1469_length_11097_cov_40.5236 . mRNA 5157 6716 . + . ID=g13243.t1;Parent=g13243;Name=g13243.t1 NODE_1469_length_11097_cov_40.5236 . five_prime_UTR 5157 5217 . + . ID=g13243.t1.utr5p1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . exon 5157 5220 . + . ID=g13243.t1.exon1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . CDS 5218 5220 . + 0 ID=cds.g13243.t1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . exon 5376 5463 . + . ID=g13243.t1.exon2;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . CDS 5376 5463 . + 0 ID=cds.g13243.t1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . exon 5794 5921 . + . ID=g13243.t1.exon3;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . CDS 5794 5921 . + 2 ID=cds.g13243.t1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . exon 6258 6716 . + . ID=g13243.t1.exon4;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . CDS 6258 6479 . + 0 ID=cds.g13243.t1;Parent=g13243.t1 NODE_1469_length_11097_cov_40.5236 . three_prime_UTR 6480 6716 . + . ID=g13243.t1.utr3p1;Parent=g13243.t1 #PROT g13243.t1 g13243 MAHKLIAQLIVMGTQVVARAFVDAYKEAATNAAKHAAQSGRTTAAVRSSTMTVQEARQILNISETTPPAEIKQKFDHLYNVNDKAKGGSFYLQSKVVRAKEAIEEEIGPLDKPQEAVTSGTQPEQADQSQAEAGASSHSGRGRSKK* # PASA_UPDATE: g13244.t1, single gene model update, valid-1, status:[pasa:asmbl_1689,status:3], valid-1 NODE_1469_length_11097_cov_40.5236 . gene 7278 8521 . + . ID=g13244;Name=g13244.t1 NODE_1469_length_11097_cov_40.5236 . mRNA 7278 8521 . + . ID=g13244.t1;Parent=g13244;Name=g13244.t1 NODE_1469_length_11097_cov_40.5236 . five_prime_UTR 7278 7471 . + . ID=g13244.t1.utr5p1;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . exon 7278 7774 . + . ID=g13244.t1.exon1;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . CDS 7472 7774 . + 0 ID=cds.g13244.t1;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . exon 7929 8145 . + . ID=g13244.t1.exon2;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . CDS 7929 8145 . + 0 ID=cds.g13244.t1;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . exon 8308 8521 . + . ID=g13244.t1.exon3;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . CDS 8308 8402 . + 2 ID=cds.g13244.t1;Parent=g13244.t1 NODE_1469_length_11097_cov_40.5236 . three_prime_UTR 8403 8521 . + . ID=g13244.t1.utr3p1;Parent=g13244.t1 #PROT g13244.t1 g13244 MASLHSHIHDALNEAASLVSGISGIPAWQLRTKQLGLPVIAWILLATLFLAVAVPMAVKFKRDRRLRGVFIRMEDLRPVGAAAPSTRPIPASAPVDGPKITLRVRFSRNEDQSVDVDVDVPDKATLGDLKKILVRQFLPEDPEDTCVWVGMRTRHTPAFRDKVMLKLLKGSLGGFDFGPEPYNDAPLSELEIKDKVELIMLAQG* # PASA_UPDATE: g13241.t1, single gene model update, valid-1, status:[pasa:asmbl_1687,status:3], valid-1 NODE_1469_length_11097_cov_40.5236 . gene 570 3106 . + . ID=g13241;Name=g13241.t1 NODE_1469_length_11097_cov_40.5236 . mRNA 570 3106 . + . ID=g13241.t1;Parent=g13241;Name=g13241.t1 NODE_1469_length_11097_cov_40.5236 . five_prime_UTR 570 793 . + . ID=g13241.t1.utr5p1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . exon 570 1790 . + . ID=g13241.t1.exon1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . CDS 794 1790 . + 0 ID=cds.g13241.t1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . exon 2017 2146 . + . ID=g13241.t1.exon2;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . CDS 2017 2146 . + 2 ID=cds.g13241.t1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . exon 2334 2452 . + . ID=g13241.t1.exon3;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . CDS 2334 2452 . + 1 ID=cds.g13241.t1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . exon 2754 3106 . + . ID=g13241.t1.exon4;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . CDS 2754 3079 . + 2 ID=cds.g13241.t1;Parent=g13241.t1 NODE_1469_length_11097_cov_40.5236 . three_prime_UTR 3080 3106 . + . ID=g13241.t1.utr3p1;Parent=g13241.t1 #PROT g13241.t1 g13241 MAGDGNGLPDTQTPPASRYSPDARVAGHGNSGADTLSGENYDASTRISVPGVIAITEDAVREKDVHFNGFGDINGNTITFVADLEGAVVKDASDGKKDGARNGSTTEGGADEADFKAPHLSLWALFVVFLGFGFRAWGGPTAQIALLKEKLVIQEKWVSIRRFNRVFALYQALPGPEAAELCCFFGYCSRGRIGSLVAGLGFVLPGFGLMLLLTYLYDEFGLENQYVRASFRAVQAGTTALVFRAVHRIGEHSFADHETKGFSWPLFLIAMVSALQQVMRINFFITLTWCGLVVLGWRLMATRRLPRWLRFLVLGLWLSVSLAGYLVFAVLDGVPDKGTSITAGSGSNSLGNIFLNGLLAGLLTFGGAYTAIPFVRNLAVIRGHWMTTNVFLDGLAIANVIPSPLVIFVTFVGYYGGSWGGAVLMTVGMFLPAFSFTLIGHSVMERALSYKYCGDFLDGITASVVGLIAITAWELLRATVTDPHLVCIFFFILAAMYKFQHPFLSSLLIIGAAIVGQVLFTTD* # PASA_UPDATE: g13242.t1, single gene model update, valid-1, status:[pasa:asmbl_1690,status:3], valid-1 NODE_1469_length_11097_cov_40.5236 . gene 3448 4720 . - . ID=g13242;Name=g13242.t1 NODE_1469_length_11097_cov_40.5236 . mRNA 3448 4720 . - . ID=g13242.t1;Parent=g13242;Name=g13242.t1 NODE_1469_length_11097_cov_40.5236 . five_prime_UTR 4647 4720 . - . ID=g13242.t1.utr5p1;Parent=g13242.t1 NODE_1469_length_11097_cov_40.5236 . exon 4426 4720 . - . ID=g13242.t1.exon1;Parent=g13242.t1 NODE_1469_length_11097_cov_40.5236 . CDS 4426 4646 . - 0 ID=cds.g13242.t1;Parent=g13242.t1 NODE_1469_length_11097_cov_40.5236 . exon 3448 4070 . - . ID=g13242.t1.exon2;Parent=g13242.t1 NODE_1469_length_11097_cov_40.5236 . CDS 3632 4070 . - 1 ID=cds.g13242.t1;Parent=g13242.t1 NODE_1469_length_11097_cov_40.5236 . three_prime_UTR 3448 3631 . - . ID=g13242.t1.utr3p1;Parent=g13242.t1 #PROT g13242.t1 g13242 MAAEFAEATLKAFQTAADVEYLAKVDRAVLVPIVLTLGTLAISLPAKARLGFGGKLVAFWFLFNGAIIHIFLDGLVGLVHRMPVLSELYNVLDKRYHGHDPSVVLISALELFFMGPACLLLFYAILQNKSYRHPLQIIVCAVQVMGTYIFTGDEILVGFKDIPTDFEYTFTTDKVIFFWIFFVFANTLWVVLPTGLMLKSYYEISKAMKVSSSGKNKKD* # PASA_UPDATE: g13245.t1, single gene model update, valid-1, status:[pasa:asmbl_1691,status:12], valid-1 NODE_1469_length_11097_cov_40.5236 . gene 8775 11021 . - . ID=g13245;Name=g13245.t1 NODE_1469_length_11097_cov_40.5236 . mRNA 8775 11021 . - . ID=g13245.t1;Parent=g13245;Name=g13245.t1 NODE_1469_length_11097_cov_40.5236 . five_prime_UTR 10963 11021 . - . ID=g13245.t1.utr5p1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 10906 11021 . - . ID=g13245.t1.exon1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 10906 10962 . - 0 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 10559 10693 . - . ID=g13245.t1.exon2;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 10559 10693 . - 0 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 10202 10246 . - . ID=g13245.t1.exon3;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 10202 10246 . - 0 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 9854 9930 . - . ID=g13245.t1.exon4;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 9854 9930 . - 0 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 9562 9662 . - . ID=g13245.t1.exon5;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 9562 9662 . - 1 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 9182 9280 . - . ID=g13245.t1.exon6;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 9182 9280 . - 2 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . exon 8775 8966 . - . ID=g13245.t1.exon7;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . CDS 8923 8966 . - 2 ID=cds.g13245.t1;Parent=g13245.t1 NODE_1469_length_11097_cov_40.5236 . three_prime_UTR 8775 8922 . - . ID=g13245.t1.utr3p1;Parent=g13245.t1 #PROT g13245.t1 g13245 MIIGGGMAYTFKKVVYNVEVGASIFDNDGAKIVQGIVDKAAKKGVKLHFPVDYITANKFSADAEVGYATDAQGIPAGLLGLDCGEKSNAIFKEAVDRAKLIVWNGPAGVFEFEKFETGTKALMNAVVAATARGCTTIIGGGDTATCAAKYNTEDKVSHVSTGGGASLELLEGRELPGVTALSNKA* # ORIGINAL: g10647.t1 original gene structure, not modified by PASA NODE_2948_length_4662_cov_45.8468 AUGUSTUS gene 412 756 . + . ID=g10647;Name=g10647.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS mRNA 412 756 . + . ID=g10647.t1;Parent=g10647;Name=g10647.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 412 572 . + . ID=g10647.t1.exon1;Parent=g10647.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 412 572 . + 0 ID=cds.g10647.t1;Parent=g10647.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 687 756 . + . ID=g10647.t1.exon2;Parent=g10647.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 687 756 . + 1 ID=cds.g10647.t1;Parent=g10647.t1 #PROT g10647.t1 g10647 MYALNLSAGPWPMNSEAEVDGLEWDAIPLRDVWALARVHTLNLSANRRLKGRQSAGLGRVHTLWLEVVLRAWTCLI* # ORIGINAL: g10648.t1 original gene structure, not modified by PASA NODE_2948_length_4662_cov_45.8468 AUGUSTUS gene 1811 4555 . - . ID=g10648;Name=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS mRNA 1811 4555 . - . ID=g10648.t1;Parent=g10648;Name=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 4547 4555 . - . ID=g10648.t1.exon1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 4547 4555 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 4118 4258 . - . ID=g10648.t1.exon2;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 4118 4258 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 3823 3897 . - . ID=g10648.t1.exon3;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 3823 3897 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 3584 3640 . - . ID=g10648.t1.exon4;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 3584 3640 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 3208 3285 . - . ID=g10648.t1.exon5;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 3208 3285 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 2879 2936 . - . ID=g10648.t1.exon6;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 2879 2936 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 2401 2486 . - . ID=g10648.t1.exon7;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 2401 2486 . - 2 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 2131 2244 . - . ID=g10648.t1.exon8;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 2131 2244 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS exon 1811 1876 . - . ID=g10648.t1.exon9;Parent=g10648.t1 NODE_2948_length_4662_cov_45.8468 AUGUSTUS CDS 1811 1876 . - 0 ID=cds.g10648.t1;Parent=g10648.t1 #PROT g10648.t1 g10648 MCVGACVRPPGPIFLVTEYLERGTLVDLFDDTSVQFTWKLRRELALSAARLTAFICYLFFLGQGMAYLHSASPPILHLDLKSANVLVSDTLVCKISDFGLSMLKGQRSWEGERVGTALWMAPEIIGAALYTEKSDVYSFGIILWEIAFRSLPYMELDGIATVQQLLIEVSSHGCRPTPAVKGFPSYRTIVEACWDQEPERRPSFAEVCDSLEGMGAEAEELDLHAKR* # ORIGINAL: g8710.t1 original gene structure, not modified by PASA NODE_2540_length_5976_cov_45.1601 AUGUSTUS gene 4165 5516 . - . ID=g8710;Name=g8710.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS mRNA 4165 5516 . - . ID=g8710.t1;Parent=g8710;Name=g8710.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS exon 4567 5516 . - . ID=g8710.t1.exon1;Parent=g8710.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS CDS 4567 5516 . - 0 ID=cds.g8710.t1;Parent=g8710.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS exon 4165 4366 . - . ID=g8710.t1.exon2;Parent=g8710.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS CDS 4165 4366 . - 1 ID=cds.g8710.t1;Parent=g8710.t1 #PROT g8710.t1 g8710 MRMLLLPLPSHFVLPGRIMDGASEVLNEVAVVADEGTVCLAMYPDGVWYPATIRRVLPDAAGFVVTYDDFPKDLPAVVEFAHVRPRPLHESSDGSESGSSDSDETPSDCDGDIHGDALRILGTHSAHVADVGHFASWERHTTGIGSRLLARMGYQPGQGLGRHGAGIVSPVDATILPPGKSLDYCMELRERGRLGRLPGQRRSRKRGRADGHVKGVGGSHSLSADSSRTKPDVFEFLNSRIRGDGHGDALILAADADTTAHVLKELDRSISGPIPKRAKGCATHSRHHVGSAATLDAASGADARRAANIELSKIHTKIRHAEEKVAHHMAAVARNEGRDSAVHTLALHKVAQARSHLALLRATEAKLQHRVRQSVQTSKLGVF* # ORIGINAL: g8708.t1 original gene structure, not modified by PASA NODE_2540_length_5976_cov_45.1601 AUGUSTUS gene 159 799 . - . ID=g8708;Name=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS mRNA 159 799 . - . ID=g8708.t1;Parent=g8708;Name=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS exon 656 799 . - . ID=g8708.t1.exon1;Parent=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS CDS 656 799 . - 0 ID=cds.g8708.t1;Parent=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS exon 359 480 . - . ID=g8708.t1.exon2;Parent=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS CDS 359 480 . - 0 ID=cds.g8708.t1;Parent=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS exon 159 264 . - . ID=g8708.t1.exon3;Parent=g8708.t1 NODE_2540_length_5976_cov_45.1601 AUGUSTUS CDS 159 264 . - 1 ID=cds.g8708.t1;Parent=g8708.t1 #PROT g8708.t1 g8708 MRALPQERRTTPLIRWPVVVAVLGVVAAELAFYLVLRWILWVAEKIFVTPGKRKRLASLREANSYEEWRSLAMDIDRIDKKQEWKEIERSDFYDCEMLRRNLQQLRSLRESNDWKALTAALLRM # PASA_UPDATE: g8709.t1, single gene model update, valid-1, status:[pasa:asmbl_4520,status:3], valid-1 NODE_2540_length_5976_cov_45.1601 . gene 2523 4075 . + . ID=g8709;Name=g8709.t1 NODE_2540_length_5976_cov_45.1601 . mRNA 2523 4075 . + . ID=g8709.t1;Parent=g8709;Name=g8709.t1 NODE_2540_length_5976_cov_45.1601 . five_prime_UTR 2523 2843 . + . ID=g8709.t1.utr5p1;Parent=g8709.t1 NODE_2540_length_5976_cov_45.1601 . exon 2523 4075 . + . ID=g8709.t1.exon1;Parent=g8709.t1 NODE_2540_length_5976_cov_45.1601 . CDS 2844 3965 . + 0 ID=cds.g8709.t1;Parent=g8709.t1 NODE_2540_length_5976_cov_45.1601 . three_prime_UTR 3966 4075 . + . ID=g8709.t1.utr3p1;Parent=g8709.t1 #PROT g8709.t1 g8709 MVSVAGSHALNQESSSLLTTAEVTALIAEDVVPMDTQDAGRRDASDDGSLSSASSIDSDPSDSQGAACPIVAPNSGAVQKAKSRRRAPPKNASTAATQATRARPARGSQRSSVVDKGVQTLEPGDLPGEGRVVAVSAKRDASTAPPASSATTASASGAVPSTATVGSRRASAQAQPAPPAPAAPPRLAPRASAGDDGDQEDRKRSGEANRAPPFHSTFTQCTVCGAHLTPRSLRYHMARHDTSTNYPCRARTCNCTQTFRTDASRLMHERRRFMKAVEKGLTNLTVQQVRDMQEKYGRAFHRQIIAIPKISSSTDPAVPKAATAGGAAQGAHMGLTDVILEAANMIEKASWLQSMQSQANSTEGAEPSEVMEQ* # ORIGINAL: g4373.t1 original gene structure, not modified by PASA NODE_4083_length_2211_cov_43.5157 AUGUSTUS gene 1468 2058 . + . ID=g4373;Name=g4373.t1 NODE_4083_length_2211_cov_43.5157 AUGUSTUS mRNA 1468 2058 . + . ID=g4373.t1;Parent=g4373;Name=g4373.t1 NODE_4083_length_2211_cov_43.5157 AUGUSTUS exon 1468 1684 . + . ID=g4373.t1.exon1;Parent=g4373.t1 NODE_4083_length_2211_cov_43.5157 AUGUSTUS CDS 1468 1684 . + 0 ID=cds.g4373.t1;Parent=g4373.t1 NODE_4083_length_2211_cov_43.5157 AUGUSTUS exon 1928 2058 . + . ID=g4373.t1.exon2;Parent=g4373.t1 NODE_4083_length_2211_cov_43.5157 AUGUSTUS CDS 1928 2058 . + 2 ID=cds.g4373.t1;Parent=g4373.t1 #PROT g4373.t1 g4373 MRASVALLVVVVAAASLACIAQPASAQFQFNFDGFDFGGGGESFFGGAQEGGQKEAPKAASAADGEKDFGFASCYVCKDGQNCVSTPYECPCPGHRAVKCKIGDWYVCKPADTVC* # PASA_UPDATE: g4372.t1, single gene model update, valid-1, status:[pasa:asmbl_6933,status:12], valid-1 NODE_4083_length_2211_cov_43.5157 . gene 2 1051 . + . ID=g4372;Name=g4372.t1 NODE_4083_length_2211_cov_43.5157 . mRNA 2 1051 . + . ID=g4372.t1;Parent=g4372;Name=g4372.t1 NODE_4083_length_2211_cov_43.5157 . five_prime_UTR 2 2 . + . ID=g4372.t1.utr5p1;Parent=g4372.t1 NODE_4083_length_2211_cov_43.5157 . exon 2 1051 . + . ID=g4372.t1.exon1;Parent=g4372.t1 NODE_4083_length_2211_cov_43.5157 . CDS 3 623 . + 0 ID=cds.g4372.t1;Parent=g4372.t1;5_prime_partial=true NODE_4083_length_2211_cov_43.5157 . three_prime_UTR 624 1051 . + . ID=g4372.t1.utr3p1;Parent=g4372.t1 #PROT g4372.t1 g4372 TKGCPVAFHLFRVWNATDSCGNKGTYRQTVTVMYTDYGYDDSNNQNGNNGGSSSSTGNGAIIGGAIGGVLGVVLIVVALGYLYRTGRIGRAAGGEKESSSLTPAPESLSTPQQSRTASASAGETGRRPSILQSLMAPRSASFLNRQAEAERLARQQNEVELKRTFTNLFNKDQMDELAEFRGEGGVPMDDLGTSAAMVDVNLTTDA* # ORIGINAL: g825.t1 original gene structure, not modified by PASA NODE_901_length_16038_cov_43.3769 AUGUSTUS gene 11831 14910 . - . ID=g825;Name=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS mRNA 11831 14910 . - . ID=g825.t1;Parent=g825;Name=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 14870 14910 . - . ID=g825.t1.exon1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 14870 14910 . - 0 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 14599 14699 . - . ID=g825.t1.exon2;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 14599 14699 . - 1 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 14380 14449 . - . ID=g825.t1.exon3;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 14380 14449 . - 2 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 14079 14226 . - . ID=g825.t1.exon4;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 14079 14226 . - 1 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 13675 13796 . - . ID=g825.t1.exon5;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 13675 13796 . - 0 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 13138 13284 . - . ID=g825.t1.exon6;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 13138 13284 . - 1 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 12664 12840 . - . ID=g825.t1.exon7;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 12664 12840 . - 1 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 12251 12329 . - . ID=g825.t1.exon8;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 12251 12329 . - 1 ID=cds.g825.t1;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 11831 12049 . - . ID=g825.t1.exon9;Parent=g825.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 11831 12049 . - 0 ID=cds.g825.t1;Parent=g825.t1 #PROT g825.t1 g825 MGCLKCFSCRPKQRYKRLVDGLYPVDPEDGLNVANMQKLTYYACTNPGQLNKIGKYLSRKQKRHLDRQRFAHVTITMKAVDQLLQACHTNLGLFVESFLQMVERLLESHRGDLQVLGTTTFLKFACIKEENPSYNRRYDFFVSKFSSMCLAADAERDKRDQTRLAGLRGLRAIILKTVEDLHADIWRDLDKIIPSLLFSMRDEDGSTPAESSAEELGLNGSRLNLPTYGDVDVILDETNLKRLACSCIRDLIARANYGNMRQLVKPILDHLDDTNSWPSKNFALDVFRIIMSSVQSQFYSIATGELLHHLDKSISAAPDVRAGIVFVLKRAMEWAHGSCGPAILECFNILLRQLQLSALAETSAGAS* # PASA_UPDATE: g824.t1, single gene model update, valid-1, status:[pasa:asmbl_9920,status:3], valid-1 NODE_901_length_16038_cov_43.3769 . gene 10054 11338 . - . ID=g824;Name=g824.t1 NODE_901_length_16038_cov_43.3769 . mRNA 10054 11338 . - . ID=g824.t1;Parent=g824;Name=g824.t1 NODE_901_length_16038_cov_43.3769 . five_prime_UTR 11245 11338 . - . ID=g824.t1.utr5p1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . exon 11188 11338 . - . ID=g824.t1.exon1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . CDS 11188 11244 . - 0 ID=cds.g824.t1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . exon 10936 11033 . - . ID=g824.t1.exon2;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . CDS 10936 11033 . - 0 ID=cds.g824.t1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . exon 10694 10802 . - . ID=g824.t1.exon3;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . CDS 10694 10802 . - 1 ID=cds.g824.t1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . exon 10468 10587 . - . ID=g824.t1.exon4;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . CDS 10468 10587 . - 0 ID=cds.g824.t1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . exon 10054 10249 . - . ID=g824.t1.exon5;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . CDS 10130 10249 . - 0 ID=cds.g824.t1;Parent=g824.t1 NODE_901_length_16038_cov_43.3769 . three_prime_UTR 10054 10129 . - . ID=g824.t1.utr3p1;Parent=g824.t1 #PROT g824.t1 g824 MVNAQILATPRGIVKIVEVLFTIITFGTVADSSCLSYDFPFSSAFASSFIDRSNFIVAAGVIGFIFALITLVIYVFALDRMPAIFNKIEMVFSILWAFILLLAAALWAAKLSDVSSSICEVSKMRAGAAFGFLSMFTFIASAALIYKSDREGGDGSGFANQGAPVTV* # ORIGINAL: g822.t1 original gene structure, not modified by PASA NODE_901_length_16038_cov_43.3769 AUGUSTUS gene 2986 6000 . - . ID=g822;Name=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS mRNA 2986 6000 . - . ID=g822.t1;Parent=g822;Name=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 4112 6000 . - . ID=g822.t1.exon1;Parent=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 4112 6000 . - 0 ID=cds.g822.t1;Parent=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 3801 3980 . - . ID=g822.t1.exon2;Parent=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 3801 3980 . - 1 ID=cds.g822.t1;Parent=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 2986 3631 . - . ID=g822.t1.exon3;Parent=g822.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 2986 3631 . - 1 ID=cds.g822.t1;Parent=g822.t1 #PROT g822.t1 g822 MDPSPIITAAPSISPTPDERSPSHIEQTCFNIVFSHTNAFRVPVFNVVLAIFPIFFLMLLMWKMDAIMRMARPHIMKRKFNYQAAAMVRDGPERIAQEDGYGGYSLQHTQFSSWYSRVFGRLVNYWRRRVLGLMLPQYFTLIRAVIGLDFFFVVLILIASQPNETWFKVLSLLTRIGYRFLELSVAVVLLSPLVRSKQNPRYIGFEWRVPLFIAGPVSILPIIGQLGVLIFCGDFIPEVSLILSVPEAQMTVYESTSQCHSKHLWLAFDAFDLLLFCVLTAIPLVYSTTEDGTPQRVELIERETEDNIYVLYPRRALVQYGIFLVITWLFRVGACLAVIFDTNNWGGPYLCLFAISYFMEHAMLPFAMHYVLVADSEFLHGNSWASNAGEFIRWINYARGGKKKGSLGGIEYTEAAGHTFAPNNSFGDALANTGMPFHASSDFDALQINPADIVVFPQPLSPPHCQYKVYRGAWLGAPVAVKIIPLDEGSVGEETRMAILSEVRILRRLSHPNVVHFLGWCEETRRTIGMGGRGRSGTNTSNVSRNRAGTEDGVAGAGIADPFASTGDYEVIEGESHRELWIVMELLPLTSVEKLNKDAQTVFTYRQLVRMFTHVCRGMAFLENKQVIHRDLKSPNVFVGRGFVLKIGDFGESTIMGTQSEADTGKLLGSYEWAAPEVIARREYSHKSDMYAFGMVMWELVSRRMPFDHIDATDMFDYQDAVMRDIGVGYRHTIPDDCPFELNQLISQCWAENPADRPTFDMARKRLEDLKRKLKLDLSMWSWNEREFSERQHPKERRVSVGSITVTVTANDTDESPHAPLLVPSASSSGMGGSSSSLHRGPRRVKSEHRSNPSASAAAAAHVPVDASKRAGYGTWSGPAPASLARELRSVVATGDVTPVSSPQ* # ORIGINAL: g821.t1 original gene structure, not modified by PASA NODE_901_length_16038_cov_43.3769 AUGUSTUS gene 2135 2621 . + . ID=g821;Name=g821.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS mRNA 2135 2621 . + . ID=g821.t1;Parent=g821;Name=g821.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 2135 2251 . + . ID=g821.t1.exon1;Parent=g821.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 2135 2251 . + 0 ID=cds.g821.t1;Parent=g821.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 2484 2621 . + . ID=g821.t1.exon2;Parent=g821.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 2484 2621 . + 0 ID=cds.g821.t1;Parent=g821.t1 #PROT g821.t1 g821 MHSSIAYGTSKVGVTQLSRILARDYGKNGILINACCPGWCRTDMAGARAPKSAEDGADTPVYLATVGADGPQGKFVRDRTVLDF* # ORIGINAL: g820.t1 original gene structure, not modified by PASA NODE_901_length_16038_cov_43.3769 AUGUSTUS gene 298 1744 . + . ID=g820;Name=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS mRNA 298 1744 . + . ID=g820.t1;Parent=g820;Name=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 298 317 . + . ID=g820.t1.exon1;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 298 317 . + 0 ID=cds.g820.t1;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 433 518 . + . ID=g820.t1.exon2;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 433 518 . + 1 ID=cds.g820.t1;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 802 980 . + . ID=g820.t1.exon3;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 802 980 . + 2 ID=cds.g820.t1;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 1252 1364 . + . ID=g820.t1.exon4;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 1252 1364 . + 0 ID=cds.g820.t1;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 1627 1744 . + . ID=g820.t1.exon5;Parent=g820.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 1627 1744 . + 1 ID=cds.g820.t1;Parent=g820.t1 #PROT g820.t1 g820 MSKLAIVTGANKGIGFFITKRLCRELGKEWVVMLTARNVALGEAAVASLKAEGLSPVFHQLDIDNTDSINAFKEHISATYGGIDILVNNAGFAFKVAATEPFAEQAEVTVRINFFGTLNVCKALVPIVRPGGRVVNVSSTAGLLKILSPALQAKFVDPSLTLEGKCTTHSI* # ORIGINAL: g823.t1 original gene structure, not modified by PASA NODE_901_length_16038_cov_43.3769 AUGUSTUS gene 6920 9663 . - . ID=g823;Name=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS mRNA 6920 9663 . - . ID=g823.t1;Parent=g823;Name=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 9406 9663 . - . ID=g823.t1.exon1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 9406 9663 . - 0 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 9155 9309 . - . ID=g823.t1.exon2;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 9155 9309 . - 0 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 8399 8507 . - . ID=g823.t1.exon3;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 8399 8507 . - 1 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 8191 8277 . - . ID=g823.t1.exon4;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 8191 8277 . - 0 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 7938 8084 . - . ID=g823.t1.exon5;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 7938 8084 . - 0 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 7391 7467 . - . ID=g823.t1.exon6;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 7391 7467 . - 0 ID=cds.g823.t1;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS exon 6920 7154 . - . ID=g823.t1.exon7;Parent=g823.t1 NODE_901_length_16038_cov_43.3769 AUGUSTUS CDS 6920 7154 . - 1 ID=cds.g823.t1;Parent=g823.t1 #PROT g823.t1 g823 MDPYDVLIDSHGAHEDAYYDLAAHPHDPVGFEVDHSMFGMTTAELRVSVHATIDAFRNQLHRDIIRDRIIAVLEERATTFFANAIHELDYVTVSAANFLGNLDYDGLVRAHTGGLLLGSAQDHRRLQGVETGRPPVPRDIFYADVNFFGTQSIVNDCVETVAILLDVPRSSLNVDASGRGLVYGSLIYELNGARVNCLECGTHGHIVPQSIGDALNVVTDAKFVLVIEKDATFQRLIDDGFVSAFGPCLLLTALSHEVYELATPTLRWIGIHNGDLARFGIPGTSMIPMTAKDRRKALTILERPYMEHTPGIAAEIRALLDRDAKAEIQAIAALNPRMLADAYLPHKLARKMWIQ* # ORIGINAL: g11125.t1 original gene structure, not modified by PASA NODE_418_length_24185_cov_41.1573 AUGUSTUS gene 17873 23924 . - . ID=g11125;Name=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS mRNA 17873 23924 . - . ID=g11125.t1;Parent=g11125;Name=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 23750 23924 . - . ID=g11125.t1.exon1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 23750 23924 . - 0 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 23100 23559 . - . ID=g11125.t1.exon2;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 23100 23559 . - 2 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 22522 22875 . - . ID=g11125.t1.exon3;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 22522 22875 . - 1 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 22256 22317 . - . ID=g11125.t1.exon4;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 22256 22317 . - 1 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 21389 21996 . - . ID=g11125.t1.exon5;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 21389 21996 . - 2 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 20812 21108 . - . ID=g11125.t1.exon6;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 20812 21108 . - 0 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 19498 20435 . - . ID=g11125.t1.exon7;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 19498 20435 . - 0 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 19170 19302 . - . ID=g11125.t1.exon8;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 19170 19302 . - 1 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 18657 18868 . - . ID=g11125.t1.exon9;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 18657 18868 . - 0 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 18339 18428 . - . ID=g11125.t1.exon10;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 18339 18428 . - 1 ID=cds.g11125.t1;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 17873 17981 . - . ID=g11125.t1.exon11;Parent=g11125.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 17873 17981 . - 1 ID=cds.g11125.t1;Parent=g11125.t1 #PROT g11125.t1 g11125 MEPADALPSGGDAAEVDVDDSLHINSLDHFAEAAEVREILGRVENEKDCSEATATKIKVILEKYQEQPHLMDAHIEFMVNSLLRTARFVSTVPSQVDVMHRLFRLIYILTKVRGHKNIVRTFPHEVIDLKPVLDLLLAQNIADQETWETRYVLLLWLSMACLIPFDMAVVDYSAAAQQSGTASIVDFIMTTARRYLAVTDKARDAAGLVVARFITRPDMKGVHLGRFFHWAHAAVTGKNLDLLEDGIRAVVQDPLRRVFVQTGALSAMVSVFALGRREDLLGHVDLAMDAVTSLWDSKEAATSTSLRKLATKLVQRAGMTYMRPRLANWRYQRGSRSLTDNLKGGAGSQSGAPLQSGNANSAGDDDEDVPEQIEEVLGRLLTSIADRDTVVRWSAAKGVGRITGRLPKDLADDVVGSVLEQFRGYESDGAWHGACLALAELARRGLLLPARLPEAVSVVLKALKYDVRRGSYSVGSHVRDAACYVCWAFARAYAPDVMRPHVTELAPALVSLACFDREVNCRRAASAAFQESVGRQGNFPHGIDIVTTADYFAIGTRSHAYLDVAPKIAVYTEYAAAMVETLLSSKVNHWDRHVRELAARGLGRLASVAPMEVVGVIDHLVAQTMSIDVNARHGSILALGEVVLAVSEKAALSECPPLSQVRIDSIAAIFPSISRANLYRGVGGELMRAAVCGAIRLLSLAKFPVHASPAVLDCWQFALDEALTHTEAELVELAAAALGPFMSEYYATMDDSSLERIRAAVLDRYLTSLAADAIAVHMRRGLLLGIGAFPAALIKGKFDAIVRSLAKNVELETDVTKRDAESRKNAVRSLCQVCVTAGASYGGSENVLLCGTNTAVVIGALLLALSDYASDNRGDVGSWVREASMTSLGRILDLCKGADARDGLPSGSGLVRAETVSAVCQALVQQSLEKIDRTRACAGGVLERLVVEDYPFVPRRAYLLERIRSVSPVNWSAPSVTFPLLVPLLDFDEYRQACVEGIVVAVGGLTESLVRHASASLLQYLRESINTAETTGAGSLLNFGRELLAAFARHEKDDRVALPLLKTVDALLSSGVLSPLGDGGSSWPIDLLNAVKKEIANSGDAHKLIASINVRFVLKEGKKLLDTPEGVSAFEAIIAQVRAGQLAKQ* # PASA_UPDATE: g11122.t1, single gene model update, valid-1, status:[pasa:asmbl_7076,status:12], valid-1 NODE_418_length_24185_cov_41.1573 . gene 876 3173 . - . ID=g11122;Name=g11122.t1 NODE_418_length_24185_cov_41.1573 . mRNA 876 3173 . - . ID=g11122.t1;Parent=g11122;Name=g11122.t1 NODE_418_length_24185_cov_41.1573 . five_prime_UTR 3105 3173 . - . ID=g11122.t1.utr5p1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 2970 3173 . - . ID=g11122.t1.exon1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 2970 3104 . - 0 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 2629 2810 . - . ID=g11122.t1.exon2;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 2629 2810 . - 0 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 2218 2359 . - . ID=g11122.t1.exon3;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 2218 2359 . - 1 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 1713 1785 . - . ID=g11122.t1.exon4;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 1713 1785 . - 0 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 1326 1499 . - . ID=g11122.t1.exon5;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 1326 1499 . - 2 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . exon 876 1112 . - . ID=g11122.t1.exon6;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . CDS 961 1112 . - 2 ID=cds.g11122.t1;Parent=g11122.t1 NODE_418_length_24185_cov_41.1573 . three_prime_UTR 876 960 . - . ID=g11122.t1.utr3p1;Parent=g11122.t1 #PROT g11122.t1 g11122 MSSDEDNNTSKKKQQFTVTSLASRVEDGALDLSVSAIVKVPARELAAVKKLTKLDLSSNKIVVLPDAFCNLVNLVSLELGQNQLESLPSDFGNLRNLRRLDLFKNKLKALPLSFGDLSELRWLDLKSNPLERVPDTVTGPMSTDKDCKNGALQVVAFMKALSEAMEEEVRLRQEAKNAEREMKLRMEKEAADMVRRDYAERKKQARAAATGSRDGRTTKGAAVSKTAEAPQEVHSVPLVFKATLIVAVVAVALGVIVLRLGLESEIAEKLDFLSNAISGQRRFAQ* # ORIGINAL: g11124.t1 original gene structure, not modified by PASA NODE_418_length_24185_cov_41.1573 AUGUSTUS gene 10514 17239 . + . ID=g11124;Name=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS mRNA 10514 17239 . + . ID=g11124.t1;Parent=g11124;Name=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 10514 10707 . + . ID=g11124.t1.exon1;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 10514 10707 . + 0 ID=cds.g11124.t1;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 10917 11043 . + . ID=g11124.t1.exon2;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 10917 11043 . + 1 ID=cds.g11124.t1;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 11324 15161 . + . ID=g11124.t1.exon3;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 11324 15161 . + 0 ID=cds.g11124.t1;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 15443 15768 . + . ID=g11124.t1.exon4;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 15443 15768 . + 2 ID=cds.g11124.t1;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 16046 17239 . + . ID=g11124.t1.exon5;Parent=g11124.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 16046 17239 . + 0 ID=cds.g11124.t1;Parent=g11124.t1 #PROT g11124.t1 g11124 MDPLNNGAIFNVLDAAYLRSPLPRHGMTAGRGSTAGAVGASAVAGRASATPAQPNAVRPPMQSTGLIRPQATRAPFGAAGGGIGALSQRSKTVAEFDSLVRSSPLPKVVASKLASPAPQFASSTHSPFGGMPGVDAGVIARQQQQQQQQQQQQQQQQQQQQQQQQLALQSAHQTSGNAHDVSGIDVFKRPLPASNATRIGGSAAVAAALSGLGVASAIVGNDNNNNTHTGTHTLHSHKDSANGNVNVGSAKSDGPLQSLAVVDSATNASNKSAATTHASSAITASAAGGIGSNLSSLTAQPFALPFSPPTAAAPSGDISLMFMPGVGGDVNDDLSHSLGFVDLGAYYGSRSSRGVAVDDDYDSMDIGAGMMAADVAAEAVERHFPSNRMGRGLDAPPSAGAALCVASSLTHVASPAATVAPSAPVASVQSSLASLTPATPAPVPASTDGQQSALAAASESLHSEAKSRDACSDVVNSGAPNAESGNVGQSSPDVDPRAAAEMAGEVTLASNTETPLAQHAPKQTPVIAPPESDESALLCGDVEEHATRTVETAPEQPTPTSAAVPTPAKKAPVRKTPARKGKATPSDSKETASPASEPAKLSGNDAAATSVLNMPPNIAPYEALSRDDTNRTKAAHSAVNTPATPVNEKQGTPVNASAATATPARRSARKRGADHGDGADHGESRNSNNNDDGQNANANNANASVRLSDAANEAVPSPARQEEKSPAADGNAEAGKAASARRHKALSEATDKDSTGGAEARTPVKSASKSASKSASKSASKGTAEKGRGIPDDYAAVVCKWHVETDDSGTCVVVGQIYDEEEEENPESTPNKFRSQPVVDRPSPLVLTCEGGSAIRLRGRPDTAKMSAAGVSQPDAFSRGFPSKWRTFLPSSSSSDGVTPSKEAGHVDIAHIETNHITSSSETSVPPKASEEKTSPAAADNTTPSAGSKSTGRGRGKGIGKQLENNAAASTPTPAKVDMAPAQAVTPSTPAQSRSVNTRSEQGKEKEDANAAIGDDQSPYMEAAARRGRSTRRGHQSPAFTATVTATAPSAPSSATVGSAASAHARATAVNANEKVTPSPLSRGAAKRTHDAAVPDESKKDAGATDGTPAVPASGVVTGGQDASNADSSGTVTRKDGATPLKKVPVAPLTEIASSVATELASLSPAKRPATPGKEADTPPSKRRKTVNDVGGTGVAPVTADVHPGTVDPNAASDVTPVKESGKSPAKSGSPKAAESKRGNATTGDAKKGVANGEDDKAGKKAQPSPRKPTATGKASAGEAVPPRTQTPDAPPPPPKDMSANGRKRGRDGNESDAGGKEGSGAAGVDTRRGKSPQTSDAPSPKKMKTATYAQVAVTTVKPASPAVEPPGTAGAAGGRGRGRGRPQKSVAVGLPEHQPSTPAPNSMRSSAAHQSLGSAGSAGSSGSASRPTRSGRLAKPPLAFWAGERIIVSGKGEVIVVGASPLANTMYGPSGRGKGAAVRKQPRDDDRKPVVMAKPSAPKHNADASASSASSSTTSDSDSDSDSDEDAFQERPWTEAERSALAAAVAKVHPGESNYWDAVARRVATRTARECRTKFHDRHPTPIQGKRKPPAKKSAADSGADATGNANAGKAGAKRSREGADDDDAIVLEGGAKTLKRRRQLRGLMDKLAQAKGEDDVFDSTPLKESSVARDAGKGGKPDAIAATSPVLSSSDTSATTSSDDDDEDGDASRAGGGAGRGRGRGGRGGTRGRGARGGGGRGARGVPSKGNSGRTRPARASSGSSEDEESASDGGGPSIERELMRPIDRDAADAYVSRMRTGRRTVGGGKASSGAVGTALGSGIGSGSGRGSLGVARPKADGGVGARVGGGRIALTNAKRAGGGGFAVAADAFNVTVGESGGDSEEEEDYYWSD* # ORIGINAL: g11123.t1 original gene structure, not modified by PASA NODE_418_length_24185_cov_41.1573 AUGUSTUS gene 3577 9555 . + . ID=g11123;Name=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS mRNA 3577 9555 . + . ID=g11123.t1;Parent=g11123;Name=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 3577 3725 . + . ID=g11123.t1.exon1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 3577 3725 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 3911 4225 . + . ID=g11123.t1.exon2;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 3911 4225 . + 1 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 4447 4603 . + . ID=g11123.t1.exon3;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 4447 4603 . + 1 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 4843 4952 . + . ID=g11123.t1.exon4;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 4843 4952 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 5281 5448 . + . ID=g11123.t1.exon5;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 5281 5448 . + 1 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 5886 5988 . + . ID=g11123.t1.exon6;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 5886 5988 . + 1 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 6282 6359 . + . ID=g11123.t1.exon7;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 6282 6359 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 6555 6683 . + . ID=g11123.t1.exon8;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 6555 6683 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 6955 7009 . + . ID=g11123.t1.exon9;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 6955 7009 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 7293 7414 . + . ID=g11123.t1.exon10;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 7293 7414 . + 2 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 7710 7850 . + . ID=g11123.t1.exon11;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 7710 7850 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 8106 8599 . + . ID=g11123.t1.exon12;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 8106 8599 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 8810 9176 . + . ID=g11123.t1.exon13;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 8810 9176 . + 1 ID=cds.g11123.t1;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 9313 9555 . + . ID=g11123.t1.exon14;Parent=g11123.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 9313 9555 . + 0 ID=cds.g11123.t1;Parent=g11123.t1 #PROT g11123.t1 g11123 MHPLPLDDCLIDSPSFRAVVGEADKQTIALSRQLKALGAIASDYGASGAKHSNTATSLADAISAFGSTSTSSTSSADGGTANPNDTEGGYFSSAMRKFGETLSEIERYREMLFLQTDALLTTPLHTYATADLGAVEERRAMVAQQRHLFETQSERYGSLPPSTAPNAHRDAFASVQQARADYAAILLSHVAQLNDIGATHEHQVIEKVLNFVAAQRAFFAQGHALMVSLEPFAEECFNRLRVEKQNALAVKKDHDIRRNALRVEWESALRIRSPPIIAEERPVGYGEKFALAGHGYLYRRDPQKASVWTRGFFFIEDSILMTTVGKAKAKLGRFEGSIRRPKANSQDAVVSPVLTRRNTDTNICFDEDEEWSRDIESIAVANLLLSTTKVMADTDADRKFCFQVVSPDKVTVLQAESEVERKDWMSVIQNATANALAAMSISKARHSIAFPADAVITGATESYETLVKRLRKLPSNSKCVDCHAPNPDWVSINLGVLFCIDCSGAHRNMGVHFSKVRSLALDRLDSVTVRMLLLLGNDVANATFDPRHTAFDGNEWRTSQAERERRIRDKYMSGTHSVFGGDSPLPKDKVHEDAVASLQDERGEMNASLSPLLNWIACGGAADEDGMRRLLHVAASSGNEEAVEFLLQNGADAETAGDDGRAAADVARDAGFDRISHSIERFIKAPKPPAAIAPAAVPDEGRIHVTDWTPSAQAAVQPSADSEDDSAVLTDDDAVGGGVGGMPSVPSGYSHHPSHAGSDAKVFEGFLKKKGDTWKNWKRRYMVLRDCVLHYYKSKEDAAILPGERDSSVRALGKIVLPSYTIEEAPSETSSPLGFKASHAGMRTYYFVADSPADLRAWIDAMNDACGAGGLAHKGK* # ORIGINAL: g11121.t1 original gene structure, not modified by PASA NODE_418_length_24185_cov_41.1573 AUGUSTUS gene 283 425 . + . ID=g11121;Name=g11121.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS mRNA 283 425 . + . ID=g11121.t1;Parent=g11121;Name=g11121.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS exon 283 425 . + . ID=g11121.t1.exon1;Parent=g11121.t1 NODE_418_length_24185_cov_41.1573 AUGUSTUS CDS 283 425 . + 2 ID=cds.g11121.t1;Parent=g11121.t1 #PROT g11121.t1 g11121 VNADGDDGGGDADMETDEPAPLNEQQNQNKPSRGPSSDAQDFFSDL* # ORIGINAL: g2746.t1 original gene structure, not modified by PASA NODE_5235_length_958_cov_32.4439_potentialcontaminant AUGUSTUS gene 2 625 . + . ID=g2746;Name=g2746.t1 NODE_5235_length_958_cov_32.4439_potentialcontaminant AUGUSTUS mRNA 2 625 . + . ID=g2746.t1;Parent=g2746;Name=g2746.t1 NODE_5235_length_958_cov_32.4439_potentialcontaminant AUGUSTUS exon 2 625 . + . ID=g2746.t1.exon1;Parent=g2746.t1 NODE_5235_length_958_cov_32.4439_potentialcontaminant AUGUSTUS CDS 2 625 . + 0 ID=cds.g2746.t1;Parent=g2746.t1 #PROT g2746.t1 g2746 DGDLLLTKTQNAIKAQIKKRNKQDAVQLVLGCADGNANTVRLMWGQLATALLLLRPGGHFVLRTAVTSLPVLTLIEFASQFFEETVMVRPVMSHNLNDGYHVVFKSNTATADLALISQITVHICRQTRASGKHVIALFPTTHPTPSPLESTVRQMNTQIAAARLAYILRVRNWEQNKQEDIKALLEDQKARLAAWTTGTDRRATTVL* # PASA_UPDATE: g8741.t1, single gene model update, valid-1, status:[pasa:asmbl_9823,status:3], valid-1 NODE_885_length_16261_cov_41.6229 . gene 14717 15704 . + . ID=g8741;Name=g8741.t1 NODE_885_length_16261_cov_41.6229 . mRNA 14717 15704 . + . ID=g8741.t1;Parent=g8741;Name=g8741.t1 NODE_885_length_16261_cov_41.6229 . five_prime_UTR 14717 14853 . + . ID=g8741.t1.utr5p1;Parent=g8741.t1 NODE_885_length_16261_cov_41.6229 . exon 14717 15190 . + . ID=g8741.t1.exon1;Parent=g8741.t1 NODE_885_length_16261_cov_41.6229 . CDS 14854 15190 . + 0 ID=cds.g8741.t1;Parent=g8741.t1 NODE_885_length_16261_cov_41.6229 . exon 15349 15704 . + . ID=g8741.t1.exon2;Parent=g8741.t1 NODE_885_length_16261_cov_41.6229 . CDS 15349 15683 . + 2 ID=cds.g8741.t1;Parent=g8741.t1 NODE_885_length_16261_cov_41.6229 . three_prime_UTR 15684 15704 . + . ID=g8741.t1.utr3p1;Parent=g8741.t1 #PROT g8741.t1 g8741 MRSFVVLAVLLALAAVCAADSKPAEDDAKPLKPSCEDEWNDRIKAAGGDDQELKAFKYPSENKELDNVYCIPTKFITFTQSTVSNTTSSGKYLNDVIEKFVEAGYYKKGNMPDVIRWSEEVFQSIDNRRIYCAKKAELTFVPSRVHAFDEPLPSEQLKRFAITLTSRYYNGTRFARTWGEGAAFRSVLQAEPFSMFGSFDLPRVTPGRPPAPHPSVGDYEDEF* # ORIGINAL: g8736.t1 original gene structure, not modified by PASA NODE_885_length_16261_cov_41.6229 AUGUSTUS gene 119 1929 . + . ID=g8736;Name=g8736.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS mRNA 119 1929 . + . ID=g8736.t1;Parent=g8736;Name=g8736.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 119 814 . + . ID=g8736.t1.exon1;Parent=g8736.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 119 814 . + 0 ID=cds.g8736.t1;Parent=g8736.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 934 1929 . + . ID=g8736.t1.exon2;Parent=g8736.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 934 1929 . + 0 ID=cds.g8736.t1;Parent=g8736.t1 #PROT g8736.t1 g8736 DYSHFVASAHITYAADRKSATVQLIAIQKDNTTKLNYLFDDVAQSTDTKSFAAATTTGPVRVAVTGGDGTRIDFDPIDLLWNVTPLKQRDGDYREGQKGAIVEMFGWPHADVEKECAHIASMGYLGVKVYPAQEQVMSDQPFNNILNPWYFMYQPVSYRLEGRMGTRDQLRSMISTCRSLGVRVYADAVINHMTGGGNDANPAHRNAQGSSCTTWGAKNTSMTGGGSPFYTQDFAYTYGDESSLPPSNEFPAAAYGPLDFHCERALNSWTDPLDLNAGWLTGLVDLNTERDNVRQRIADYLTDLLSIGFSGFRVDAAKHIKPEDLAAIFGKVAVNMGGSLPDDFIAWLEVLLGGEGDLLMCNADSGYNYGASLASLLAKAGLSSADVDKVKIWNSGYPKETDKGWCTITKWRSAIQNDDSDQQNPGSTSRDMGSDGCVLIENCQSTDQHRQFETKLFTSPNGASDNDNDFPIRLVLSSFWWASQSALGIPDGKSDCALCRVGCDTCQSVPYAPAYNESSCGYDAKPGYTRVHRDVAIVKAMRSWMHLPTAVSPADIGLPSNCE* # ORIGINAL: g8739.t1 original gene structure, not modified by PASA NODE_885_length_16261_cov_41.6229 AUGUSTUS gene 6126 10066 . - . ID=g8739;Name=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS mRNA 6126 10066 . - . ID=g8739.t1;Parent=g8739;Name=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 9878 10066 . - . ID=g8739.t1.exon1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 9878 10066 . - 0 ID=cds.g8739.t1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 8308 9642 . - . ID=g8739.t1.exon2;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 8308 9642 . - 0 ID=cds.g8739.t1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 7614 8096 . - . ID=g8739.t1.exon3;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 7614 8096 . - 0 ID=cds.g8739.t1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 6843 6865 . - . ID=g8739.t1.exon4;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 6843 6865 . - 0 ID=cds.g8739.t1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 6443 6602 . - . ID=g8739.t1.exon5;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 6443 6602 . - 1 ID=cds.g8739.t1;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 6126 6305 . - . ID=g8739.t1.exon6;Parent=g8739.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 6126 6305 . - 0 ID=cds.g8739.t1;Parent=g8739.t1 #PROT g8739.t1 g8739 MADDDVAVGELDGEQVCNGHPLGFFSQLPVELFAEILSYLTPFECGLLATTCSILRSIYRSLKQELEVAQPYRIEQYIPYCLWTVQEACSRGPFDLVHRIVHAEKAGHPDAEIVAGIAGDASDVVYKIRAAGLLEFLAEYEETRHVFLAPGDDGQLRPGDLDLFAWRVRLVCDWSLSAASTLAMTAVDWLRGPSHKGVLASEFTAAVVEAACGAGLADEVRAGISALGCPGDPCTCRSIEWLATARTYEAVQAVMDCACRPSSRTEHVVQDEDEGAADDSIDIIIPARNFTVEQVALTFDWLGRHPALRFVNAALECGRVDLAHWWMGHMTATGGDGFSAAELDAPSRVSLIASAMSSENIDALAWAHDTFCPHCAVHSTPDPVVDVDADLPIIVGIADACLSSLDWLSAHCVPLNRTHTASILRRAAKRNRSDIVQWVGGHIWDVEPMSLVMAFARAVAAGALAIVRLLRPRVVQILPVDEVHKRCMIDCMAAEDERCFAMVRYLHEELHVPILEEAIERAVSCNRVAVVRYALRSGAMDLFGVDSARRLLDMALEDKRFALIKMLAAHVPHLLIDEDHPPIPYERINNAMWELGDEWSDFAVPLVPEPFHTFMWIFKHRPQLVAAPITGVIPPAERRLKGEPAPVGTLRSIFAQMFLYDGCIEARRVVEVLNCSRMRYIAAYLLAALAGKKAVSEADVKKILASVGIEADDAKVAQVVSELKGKDLEQVIAEGNSKLASVPAAGAAAPAAAAAAPAAGGAKKEEKKEEKKVEKAESEEGDMGFGLFD* # ORIGINAL: g8740.t1 original gene structure, not modified by PASA NODE_885_length_16261_cov_41.6229 AUGUSTUS gene 10721 12227 . - . ID=g8740;Name=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS mRNA 10721 12227 . - . ID=g8740.t1;Parent=g8740;Name=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 11999 12227 . - . ID=g8740.t1.exon1;Parent=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 11999 12227 . - 0 ID=cds.g8740.t1;Parent=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 11281 11851 . - . ID=g8740.t1.exon2;Parent=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 11281 11851 . - 2 ID=cds.g8740.t1;Parent=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 10721 11180 . - . ID=g8740.t1.exon3;Parent=g8740.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 10721 11180 . - 1 ID=cds.g8740.t1;Parent=g8740.t1 #PROT g8740.t1 g8740 MVNTFIPSSLGKEARKCANIIREFTMPNEKQGPERVIPYNIILHAKGLAILTVIKAGFLVTARGGSGLVFSRLPNNDWSAPSAIGIVGLGGGFELGAEITDFVMVLNNQSAVDAFSKGTNVTLGGNITVAIGPYGRNMEGDIAVRSPAAIYTYSRSRGLFGGLSLEGACIIERKDANRKFYGDETIRSRDILNGSVGAPTEAQPLYQALEEHERIANATHLERMQKKSGGSKSSESDFSGPSPTSSSSYSGHQRGGGALSPRAESYRQRTLSNSSSHSSASLGSNSIQRTPSVGNSNNLSTSWAASSLPASASSQAHVQSQAKDRYVSSPNTLRTHTATAASFSNMNSGSRAAPSYAAVAPVVRVKAMYGFEGVQAGDLSFAVGESFIVTRQTESANDWWEGELNGRRGIFPANYVKVL* # ORIGINAL: g8737.t1 original gene structure, not modified by PASA NODE_885_length_16261_cov_41.6229 AUGUSTUS gene 2259 3576 . - . ID=g8737;Name=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS mRNA 2259 3576 . - . ID=g8737.t1;Parent=g8737;Name=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 3417 3576 . - . ID=g8737.t1.exon1;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 3417 3576 . - 0 ID=cds.g8737.t1;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 3028 3116 . - . ID=g8737.t1.exon2;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 3028 3116 . - 2 ID=cds.g8737.t1;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 2789 2890 . - . ID=g8737.t1.exon3;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 2789 2890 . - 0 ID=cds.g8737.t1;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS exon 2259 2657 . - . ID=g8737.t1.exon4;Parent=g8737.t1 NODE_885_length_16261_cov_41.6229 AUGUSTUS CDS 2259 2657 . - 0 ID=cds.g8737.t1;Parent=g8737.t1 #PROT g8737.t1 g8737 MELQIRLNTARGKANHGWLKTSHTFSFADYFDRKFNGFGPLYVINEDHVQPGKGFGTHGHSNFEIYSYVVSGELEHKDSLNNVETIHRGEVQFTTTGKGISHSEYNRNQKEWVHFIQIWVHPNEMNLTPSYTTRKFDDKDKDGRLCHIIAPVAKKTKEGNPIGINQDFNMYASILKHGVETSLRVAKGRQVYVHVIEGSGVSLEVATNEDKTVTLGAGDGLFVTNGGGELFFKGVGATAAEFLVFEMEQ* # PASA_UPDATE: g8738.t1, single gene model update, valid-1, status:[pasa:asmbl_9822,status:12], valid-1 NODE_885_length_16261_cov_41.6229 . gene 4065 5592 . + . ID=g8738;Name=g8738.t1 NODE_885_length_16261_cov_41.6229 . mRNA 4065 5592 . + . ID=g8738.t1;Parent=g8738;Name=g8738.t1 NODE_885_length_16261_cov_41.6229 . five_prime_UTR 4065 4115 . + . ID=g8738.t1.utr5p1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . exon 4065 4169 . + . ID=g8738.t1.exon1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . CDS 4116 4169 . + 0 ID=cds.g8738.t1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . exon 4305 4386 . + . ID=g8738.t1.exon2;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . CDS 4305 4386 . + 0 ID=cds.g8738.t1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . exon 4545 4627 . + . ID=g8738.t1.exon3;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . CDS 4545 4627 . + 2 ID=cds.g8738.t1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . exon 5057 5179 . + . ID=g8738.t1.exon4;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . CDS 5057 5179 . + 0 ID=cds.g8738.t1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . exon 5473 5592 . + . ID=g8738.t1.exon5;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . CDS 5473 5493 . + 0 ID=cds.g8738.t1;Parent=g8738.t1 NODE_885_length_16261_cov_41.6229 . three_prime_UTR 5494 5592 . + . ID=g8738.t1.utr3p1;Parent=g8738.t1 #PROT g8738.t1 g8738 MTTFKHKENGLIAVIGDEDTVTGFLLAGVGEIDARRQSNFLVVTKNTPVPTIEEAFRKFTGREDVAIVLINQHVANEIRYLLDGYHRPIPSVLEIPSKEHPYDPAKDSILRRAKTLFQND* # PASA_UPDATE: g8801.t1, single gene model update, valid-1, status:[pasa:asmbl_8478,status:12], valid-1 NODE_610_length_20251_cov_36.6879 . gene 93 3484 . + . ID=g8801;Name=g8801.t1 NODE_610_length_20251_cov_36.6879 . mRNA 93 3484 . + . ID=g8801.t1;Parent=g8801;Name=g8801.t1 NODE_610_length_20251_cov_36.6879 . five_prime_UTR 93 94 . + . ID=g8801.t1.utr5p1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 93 184 . + . ID=g8801.t1.exon1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 95 184 . + 0 ID=cds.g8801.t1;Parent=g8801.t1;5_prime_partial=true NODE_610_length_20251_cov_36.6879 . exon 380 424 . + . ID=g8801.t1.exon2;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 380 424 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 710 784 . + . ID=g8801.t1.exon3;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 710 784 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 1043 1093 . + . ID=g8801.t1.exon4;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 1043 1093 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 1509 1610 . + . ID=g8801.t1.exon5;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 1509 1610 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 1809 1949 . + . ID=g8801.t1.exon6;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 1809 1949 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 2309 2421 . + . ID=g8801.t1.exon7;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 2309 2421 . + 0 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 2782 2885 . + . ID=g8801.t1.exon8;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 2782 2885 . + 1 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . exon 3181 3484 . + . ID=g8801.t1.exon9;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . CDS 3181 3248 . + 2 ID=cds.g8801.t1;Parent=g8801.t1 NODE_610_length_20251_cov_36.6879 . three_prime_UTR 3249 3484 . + . ID=g8801.t1.utr3p1;Parent=g8801.t1 #PROT g8801.t1 g8801 VIVGVNKYRLKEQDAVDVLSIDNTKVREGQIEKINKLKAQRDGAKACAALESLTECAKTGDGNLLDLAIKAARARCTLGEISSSLERVWGRHKPVDRMVSGAYKSEYGIPEDIKKTVDRVEAFTKKEGRRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPEEVARQAIDADVHCVGVSSQAAGHKSLVPSLIKALKDNGRPDILVVCGGVIPPQDYHFLKDAGVTSIFGPGTKVPVAALEVVDAIEAVSKTI* # ORIGINAL: g8805.t1 original gene structure, not modified by PASA NODE_610_length_20251_cov_36.6879 AUGUSTUS gene 17604 19890 . + . ID=g8805;Name=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS mRNA 17604 19890 . + . ID=g8805.t1;Parent=g8805;Name=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 17604 17731 . + . ID=g8805.t1.exon1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 17604 17731 . + 0 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 17970 18060 . + . ID=g8805.t1.exon2;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 17970 18060 . + 1 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 18467 18577 . + . ID=g8805.t1.exon3;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 18467 18577 . + 0 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 18936 19076 . + . ID=g8805.t1.exon4;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 18936 19076 . + 0 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 19350 19410 . + . ID=g8805.t1.exon5;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 19350 19410 . + 0 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 19601 19732 . + . ID=g8805.t1.exon6;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 19601 19732 . + 2 ID=cds.g8805.t1;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 19850 19890 . + . ID=g8805.t1.exon7;Parent=g8805.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 19850 19890 . + 2 ID=cds.g8805.t1;Parent=g8805.t1 #PROT g8805.t1 g8805 MVDRAFKDQRANKRDTIDNKFNYADKKIGEGTYGVVYKATKQNDPDPREYALKKFKSISNTEGLSSSACREIALLRELKHENVIGALEVHLNPFTRDVWIVFEYAEHDLLQILQWHRELPQQSHMRRMHEQMMKSILWQILNGLHYLHSNWVLHRDLKPANILVMSKDSSERGRVKIADLGMARLFNNPLKPLSDLDPVVVTIWYRAPELLLGAKHYTKAIGDSCTWNLLSRLC* # ORIGINAL: g8802.t1 original gene structure, not modified by PASA NODE_610_length_20251_cov_36.6879 AUGUSTUS gene 4205 5212 . - . ID=g8802;Name=g8802.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS mRNA 4205 5212 . - . ID=g8802.t1;Parent=g8802;Name=g8802.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 4205 5212 . - . ID=g8802.t1.exon1;Parent=g8802.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 4205 5212 . - 0 ID=cds.g8802.t1;Parent=g8802.t1 #PROT g8802.t1 g8802 MSKQADLSMFDPLQGATTQPLQTATTQRSSGSFGSGIQPGGVNPSSAALYQQQIAFFQQQQQMLVQQFCMQAGVASYAQLPPAYSFQLQQQLQMLQMQQSQQLQAFQQQQATIQQLPQPQQQFHTQQQPLQQQQQQQQQQQQQQQKPLPAVIAPPAQSAQPVQRRLSGDNHSQHSTFGAPASAVPPSVRSAQQPRSASIADPYMSRSDSSSNATVTRGMFDDDHRGKRAYSVDDANRRDAFHDDGFGGSVGDGAPRGDRHAPQTQPTSLLNRLQSAGEAFVNSAQSASERFGALAQDAIDKGDKLWKFKDAQVYAMIDGGQLGASNSLLDDDEDD* # ORIGINAL: g8804.t1 original gene structure, not modified by PASA NODE_610_length_20251_cov_36.6879 AUGUSTUS gene 10606 16747 . + . ID=g8804;Name=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS mRNA 10606 16747 . + . ID=g8804.t1;Parent=g8804;Name=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 10606 10748 . + . ID=g8804.t1.exon1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 10606 10748 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 11020 11443 . + . ID=g8804.t1.exon2;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 11020 11443 . + 1 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 11618 11752 . + . ID=g8804.t1.exon3;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 11618 11752 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 12033 12155 . + . ID=g8804.t1.exon4;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 12033 12155 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 12516 12813 . + . ID=g8804.t1.exon5;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 12516 12813 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 13171 13353 . + . ID=g8804.t1.exon6;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 13171 13353 . + 2 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 13621 13725 . + . ID=g8804.t1.exon7;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 13621 13725 . + 2 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 14015 14793 . + . ID=g8804.t1.exon8;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 14015 14793 . + 2 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 15057 15917 . + . ID=g8804.t1.exon9;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 15057 15917 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 16165 16328 . + . ID=g8804.t1.exon10;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 16165 16328 . + 0 ID=cds.g8804.t1;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 16606 16747 . + . ID=g8804.t1.exon11;Parent=g8804.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 16606 16747 . + 1 ID=cds.g8804.t1;Parent=g8804.t1 #PROT g8804.t1 g8804 MMAGCVSELADSETLSLLASIVGDGVDRKVLGLLLADCEGKVEVAAHRYFESDGEVLRRFDRKRPLASDVNVASESTRPHKRANVERSPDVTRTISANAAGKQAGIDLTASHAHDGSSNGDQGMFVGEFVTVGYSTTVHPTRLNAGDDISVERASVVPQQTTASAGRPHGRQKTQPESFVIRFVSKGSEIGRLPADISRWMAVLMDAGIVFLEGVCVDAPPRLSLMCDVILQLKAYLRRGAFAEAPRMPNGAQAPAAEPTKEAEEKAQKLSQAVQKLLDLVGLVPTKSLLRSRRGGEVDVADGAGNNNGGNVGTIASSDVDLSALYLRAQKYDASLPEVTPSALLTTQLRPYQKQGLGWILHREGVDIGAGRGNGSFSLEGESKDNAIHPLWEEFVCGGRDDGAQTHFYFSPYNGALRLSFPSAAEASKGGILADDMGLGKTVQILSLVVTNPSPVTLISWRTGSQPVAKGTRQPRLSFSRATLIVCPLSLLAQWRDEIELHTGLKSNAVLVYYGADGNKGTLNFATAAEIVLTTYGTVSSEYSRCGTAFEPGSSQAPTGLFSVHFHRVVLDEAQSIKARDSAVSRACRQLSADSRWAVTGTPVQNSLDDLHTLVSFLRAEPWSSTAFWNASIARPLERRDPAALDALQAVMQSLLLRRTKDQKAADGRPLVELPPRDIRIVRIPFGKGEADFYDAIYSRSRTRFSEYCAAGTILSNYANILELLLRLRQACDHPFLLNPRIMAEREGGSAGGKAPGQRSASRAVFSDIDELVSMFVSGSSQLQMAPAFVDAARRTIASLKEDALSDARGDRSVLADGGGDGAEGGAVECVMCLDPPECPVVLPCLHVGCRECMHAIVERLGVCPICRTAVTVDELADLDSIRSKSEKASAAAGGSPPPQTTPTLTVGSGAGDVAWRKSRLLSSGWGASVWKSSAKIDALISDLRECGVGKNAKTSPDALRDDGQPHKCVVFSQWTSMLDLVEHALAMEEVVFLRLDGSLSQAERERVIEKFTCGTEAHVFLVSLRSGGVGLNLTAATRIFVLDPWFNSAVENQAINRVHRIGQSRPVVVHRYVVAGTVEERMLLLQDKKDGVADDAFGTSEQRQRDRIEDLRSLFEL* # ORIGINAL: g8803.t1 original gene structure, not modified by PASA NODE_610_length_20251_cov_36.6879 AUGUSTUS gene 6893 9509 . + . ID=g8803;Name=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS mRNA 6893 9509 . + . ID=g8803.t1;Parent=g8803;Name=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 6893 7589 . + . ID=g8803.t1.exon1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 6893 7589 . + 0 ID=cds.g8803.t1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 7748 7783 . + . ID=g8803.t1.exon2;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 7748 7783 . + 2 ID=cds.g8803.t1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 7908 8010 . + . ID=g8803.t1.exon3;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 7908 8010 . + 2 ID=cds.g8803.t1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 8378 8581 . + . ID=g8803.t1.exon4;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 8378 8581 . + 1 ID=cds.g8803.t1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 8740 8848 . + . ID=g8803.t1.exon5;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 8740 8848 . + 1 ID=cds.g8803.t1;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS exon 9081 9509 . + . ID=g8803.t1.exon6;Parent=g8803.t1 NODE_610_length_20251_cov_36.6879 AUGUSTUS CDS 9081 9509 . + 0 ID=cds.g8803.t1;Parent=g8803.t1 #PROT g8803.t1 g8803 MPAATVSRAAQPNMMHTALFYENIVTERIPSVTRISSSSCSDSTASSPDISQPSRRKPRRVTLVALSASKVTSVDESTGRNNSTSLICRAPAYDMVSTSIFRRPGTASRPSAAAISDPHGRSCSVGSDNEEHLPSYDELFGYSNTASTAAASLDFGDRRPSSARTSVGGLVLPAVSSAAPQRIYNVAHPVEPESDWISPSYFVECARRDTAAHFSADAHGLRIRSKRQLFVRIESGHNLMPKRHGTTNPFCEVSYGQVSTETAILKKTLEPKWNVITRIDIPDRSIGVSDVVLTLKGKNSLFPDSFLGTATITRAAILNSEGITMRSELKLLDKRERRGTTQEKADRGSLVVSWYLSQRMCDNFVFKIAQRAFASGEFSITDEHNRALFEVASDLARGRMFVYDTAGNEVLVVRRKGSVDCSFEVRRPPSAGGEILAVVAPAVSSCFEVQTPIGPLAVACEGLSVFRFKRRLPTQSGGTSSTLAKLSRTYDAPCGEGWKMEVSPAEDVLGYLGIALVMDGCIRTF* # PASA_UPDATE: g4669.t1, single gene model update, valid-1, status:[pasa:asmbl_5749,status:12], valid-1 NODE_322_length_26976_cov_42.9138 . gene 11562 20836 . + . ID=g4669;Name=g4669.t1 NODE_322_length_26976_cov_42.9138 . mRNA 11562 20836 . + . ID=g4669.t1;Parent=g4669;Name=g4669.t1 NODE_322_length_26976_cov_42.9138 . exon 11562 11662 . + . ID=g4669.t1.exon1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . CDS 11562 11662 . + 0 ID=cds.g4669.t1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . exon 11752 11817 . + . ID=g4669.t1.exon2;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . CDS 11752 11817 . + 1 ID=cds.g4669.t1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . exon 11964 16443 . + . ID=g4669.t1.exon3;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . CDS 11964 16443 . + 1 ID=cds.g4669.t1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . exon 16588 20012 . + . ID=g4669.t1.exon4;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . CDS 16588 20012 . + 0 ID=cds.g4669.t1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . exon 20180 20836 . + . ID=g4669.t1.exon5;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . CDS 20180 20669 . + 1 ID=cds.g4669.t1;Parent=g4669.t1 NODE_322_length_26976_cov_42.9138 . three_prime_UTR 20670 20836 . + . ID=g4669.t1.utr3p1;Parent=g4669.t1 #PROT g4669.t1 g4669 MASAQRQSIELRVNPAHSITTNVDGQTNSYHVVIAVGQNARPSIMKVTIPSTTLPKAKAASKAKITRTQLVGIVVTVAVVVILAVSLAIALTERADSKPTLREDVSAVIVNGTLSSSSLASLIGASAVLQMEQLLECSPFSLSNATVSLRAATTNGAVVVDGIIVAWGVNASMALVFTQAKNGSIEAGFSGSTQSPVRFGGKNDDDVLCVHSMSFTAATPGTLVFAAQMIRGNCDSSAKKSLFAATAVNLTDAIISISGSMAVAAAPTVLKSTLHNGTSTTWTMETSVPAEDVATHQPKLQSPVLHSACMRCTLNVTVTSLIRLRLDGNASQEIEFSAVGTLRSDDGVRMTGQTSSEFAGRVSIGAASYTVQSATVSTAWNQDVFDGSVWANLTALSSRRSAIVHPTIRLQTQLPRMGLKCPVAAMEVSAVPLLSHALSAIGSGDIDRSGFDGAQSSFARAVAATPLGGSINGTLSLFCGGFVHLFSEQASIQHGPFVSMRSILPFLRAIPGRSLRIGDTRLSQATVLSTLEFLRGDNSLLLDASIPASFCRMDDRTCLADAAIELRNQILKMDVSATLRQLIFTPAIAGFTDSTTLSPVALLSAVASARDMFVEAPFEAITSVGTVVTTHSDTVTTMTEALIDSRSPQANVSITNCSVAISTVPFVQINFGARATKTHSILDALQLMTFGHGDIETQVAATIATDTVFIDAINLCSFQEGNDASDAEILINGFLSVERLLTRMAISMSHTPNTQQRVLVAYNTTCGSLVHNLLEFSYSSRALSGSTSLGTLGSITVGVNATIVATAISTVAQSLNGNAFSVFLDLNTAVPLQDCLEGITRSLNTVSSQPIDITIPIGQPLSVVILVAAASAAIKNANASVVVNDVSVDATTLYNAIACTVNSGAESRSEYDVHPVPLPQLSMKLADVLGAIATTLIPNDNTALRWPQIPVAFVVGGEYAATSVGAISLLSSVVDAVQQLPILARTQIPIDSDCASSIALVAKESASYVTALPVVAITDINGRVYFLQTVDALVALAAVSIDLSEHCSIGATFGSAGLALPINVSSTCITADSTVATMEISNSTSLKMTSIIPPVQAASIGAFNPAWVSFVARTTTITAKDVSTVDVASLSIPFAMQENGQPITVLVDAAVSRARDSNGMLSVESVPQSQLIFQMNYSDGRGLLATPISLSGRVDTLGAFNATVGLRFMFSSGAIADAFVAIPTAVDGNGCFYVHAASEQVVLRDIIDFALTDGSLSQIPSILRPSVYTRKASFRDIRMILACESSSIFARGDVSSEAFGLNAPIALSAETMCDWASLAQALRSVGETYPVMQSSLLTIIASAIDTNISTLAALPAPCAYGSVHAPVGTIIEKVHQVLQSSPNVSSTITVCSDLLEGCLPIASAISAALVQMDAIPLLTSIRVQVARPTVIATIAPTDGWSPAVIPGASAGSSTLQGGFLLYSSRPADVSVQRYLPIGHNNGTGRVRTLHAGVMFLAPVGAPGTETIVTINNMFAGENKQQRRRRDAESGQLINWLDSFFDAAEELYTEINTWTGNETIPVIDIGSNARMLNVQIQVKGGQDSVSVAGQLALYAHGFPNCTGATATASKSKSAAKCSETTNATVVSVSGTASPSSVSLSGRLQEKLTLFTFGSTAATLEDGNFKFGYQGGNVFVDASGSMVIGALNVSISVAFAESGCSKYSGSFSAPSGSATLGGLFQDMGLGHVVDGASSTLKEYLFGWALNSLTVDGALWDASCEQFNLVAVLDNAALGTGASIAFRWSPASILLVVVPATDINIGALLADTGLTNDVAAISLTDVAFVYSSIPSSVNPSTVIQGAPDVALTLVDGFNLYAVADFGSAGSAAASAAAEMTSTTLVTLQGYIGVGNSSGFAFSGVLGAQPIAIASGVSVSSLAVTIQDIEPYFSLNGDLTITPTQANGGQDIDTWQIAVSMQYGQGGFQFAGFTEANGTAPIAMIPVASGSGVAIESVSIDGAYVSSQPGTPAYFAFNGNISAVYADVSFALSLTIDNENGSQVVLNAEATPMSSTGWSLASLLADLVGSSPIASDFGPIGSIVGDIEVMNVGFGVSWQSSAGLSFFVSGAIEVDGAVMTFGLQVGESTGGAQSTSSSKWYYAVSFNPGDALVTISSAIIGALENDIENARRSTNDAASSSLGPVQSLLTSGASPAVIITSLLAPAVMAHSPFLGKAIGAVAEALVSGFNVAGTLSLTGDGVLADIGSATGFTTVVAALSISAGFSLPVTMSATFEAGPNGITVVPGFMALEDASLSITLAKTMATSTFDISAKVLITTDSQQFDMVGSLGFNAVGITVGAELLAPGIYSPFGINNVQLYSADASVTLAYEGLEPTAFGLAGTVDIGPPADTDISAAIRYNVAAGQAAFAFSLTNFDLDTMVKTFYPSASVPSWLDVSIGSASFSVNAGPTFEWDGTTFPAGFNAAIANASFFFIDDFSATFSLTPQMVSASASIDPFTIGDGLFSVRGFPNPDAQPSFALSLPLAGGSIDDASFAVDGSVTLLGLTEYANISVSATGMSVDAGLSFFVFSANVEFTAVFGESNGDGFGPIEDFSFLGTFQDDLMTYISQKLPAMIESARQSAESSFQGAIDTVQSWQSAIAGIDNLITLRTQQIDAVQNDIEATLQGYILAVQSAENTVSNLNSDINSIENTISNLHWWQWVDGQGEFYSAEVATLWCSEKAAEGALELAQLVLEGAEDIVSDLPLAALDPVILALQLSRDAVEAFLNLATGVLEVAEGAVSGLLLLAEKILEAIGNAINIQSVTIQGSLSQLKAGQLPSITIDLILFGKQYTPTLSVDLSDIESFLQSLVKWIVNEFTP* # PASA_UPDATE: g4667.t1, single gene model update, valid-1, status:[pasa:asmbl_5747,status:3], valid-1 NODE_322_length_26976_cov_42.9138 . gene 1 2082 . + . ID=g4667;Name=g4667.t1 NODE_322_length_26976_cov_42.9138 . mRNA 1 2082 . + . ID=g4667.t1;Parent=g4667;Name=g4667.t1 NODE_322_length_26976_cov_42.9138 . five_prime_UTR 1 57 . + . ID=g4667.t1.utr5p1;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . exon 1 224 . + . ID=g4667.t1.exon1;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . CDS 58 224 . + 0 ID=cds.g4667.t1;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . exon 574 760 . + . ID=g4667.t1.exon2;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . CDS 574 760 . + 1 ID=cds.g4667.t1;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . exon 894 2082 . + . ID=g4667.t1.exon3;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . CDS 894 1937 . + 0 ID=cds.g4667.t1;Parent=g4667.t1 NODE_322_length_26976_cov_42.9138 . three_prime_UTR 1938 2082 . + . ID=g4667.t1.utr3p1;Parent=g4667.t1 #PROT g4667.t1 g4667 MPTYFEIPHIDEALFAGNAILWPGEVIEEELKVPGAYTQSNDLTLEKLLAGPHASKCVIATAETPYTFLSHRHSSDPNVSRAHHVDEYIAAYKPGLVWLDIACIPQGGPKYSKYDYFSHTRPTVMNLHLILRGAKDVLVCLKPEHELESRLTRHIRHELLAGVLYNLRQHCYGIGAPFYALDARAVALSQEMTNNEYYDRLFCYVERIACPKEGPTNLRDQFGQWLKKLRALGNDVIAMEKQFKDKVRGGLTREKNTEERIDSVIAIAEGLFGGGRGAKDPLSFVEQLSCACDADRIAVRRIEKELLGFRFVPEDVVAIQVALNTPRRTHVTDLASIGKFRSVTVWSEFPDLNEYELCRNGKNLALVLGGALREGRPVWVSSKDTGIVQVVVMGMDLGMTEHTIIHLWDDGTKASIERYQGVFYTSSCCVSMNGGITIQPLRMLENVNDSNKLMAVADQFTCPVR* # PASA_UPDATE: g4670.t1, single gene model update, valid-1, status:[pasa:asmbl_5746,status:12], valid-1 NODE_322_length_26976_cov_42.9138 . gene 21439 25557 . - . ID=g4670;Name=g4670.t1 NODE_322_length_26976_cov_42.9138 . mRNA 21439 25557 . - . ID=g4670.t1;Parent=g4670;Name=g4670.t1 NODE_322_length_26976_cov_42.9138 . exon 25399 25557 . - . ID=g4670.t1.exon1;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . CDS 25399 25557 . - 0 ID=cds.g4670.t1;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . exon 24949 25148 . - . ID=g4670.t1.exon2;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . CDS 24949 25148 . - 0 ID=cds.g4670.t1;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . exon 21439 24752 . - . ID=g4670.t1.exon3;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . CDS 21482 24752 . - 1 ID=cds.g4670.t1;Parent=g4670.t1 NODE_322_length_26976_cov_42.9138 . three_prime_UTR 21439 21481 . - . ID=g4670.t1.utr3p1;Parent=g4670.t1 #PROT g4670.t1 g4670 MKGHRLHGILAFIYAVAIAVHCIAAVDGTLLNVTVYVSGSLDDFLPVQTDRAWGEYGGLARVAALMRSRFALAAKDTGTNSTAIIGIFTGGFFDMYTRNQNLSRGVLLGIAESIGFRAFSLTSSDGWGGSAAFLEDYESLANASVICSNAILDSTASDRMRRLLKPYSIQTVNNVTFGILSFVDIDFCTRAFAFCGPGKDILGIDDPDSELTVTTAVNRMLSSVAVRPDVIIAVPPVSLLTSLTISNSFGDHAARSGVDIVLFSEGNYMSLAEAGSSFIPPPIVDIAVGGSGRRLLVASSLPNGKTVAKIDLTLDTAATDHRLSVRPTTTHVFLRPCAPGSTALVNPQTLCVEPAADVVNAIRPPGQAFDSVVGVLTTASLTVEGSTDCQYAECSGGNILTDAMRFYVPQCDIAFVDGASIRAGFPNGDITDRTILNAFPFENRISSFGLRGAFLADAIRHGLELATDLPTRLVAATQTCSAIPGFLQFSGLRIRYNPFDRNVLRLLSVEREVTPGAYDLLDNFAVYRCCAPSFLVDGGKGYSVITDNALHRVDYDVTVVNVVQQYLAANPDGLNLTLGQRIIVDARPVCVPACVHGSCTISLTCVCDVGWTGADCNTTASIDTGLYTCDLHRTNGKILLRTRGAIDNFPVGVGVITLFLVLFVAEVLCVPYFTHRFARVLQTSRSRSNDIVRTARLNRANVIRLVLLALQGVQIHAIVLNVELSDIFVESNGKVFSSISITSFASSFFWYFWVVMAVTLLWLVYAWAYVLDGGMFLRKTAAGRVFLIPADQFLQLWVSAGFIPTLLNSMRAFHCWYLDDATAFMATDGVCSVRCWAGEHWAYVTVALITLLVYYPLATISALLWQDLDAHQEVRNAPHAFIVEPLIKVALVVMRVYFTSFPVAYLSIVAVICAATAVYHWRWAPCYVAWVNTPIALAYISAFGTALVLLIGVVADRSDAFFAVPAIWVAAAVAVLVYLRWMYPDDLVKRKPHEADLNAREMLMAIKKVFVRRGSAAVSTPSFPQTSGAQLRARLSVAWNNPVTSVDSEVTSVCNDLPIVGNMRSNASSQRKWSGHALWTPSAVSFADAAAQSRKTVDEAVTAGTLDRAVGRWFASLDPHLHWPASIFIASISDDDFLGMVTEIYSRITTVSQCPKCAEPMPSLHCVGLSSCTSTDDGAKTHEDRSNCGGGDCADDIISVQSIRCQIVL* # PASA_UPDATE: g4668.t1, single gene model update, valid-1, status:[pasa:asmbl_5744,status:12], valid-1 NODE_322_length_26976_cov_42.9138 . gene 2123 10726 . - . ID=g4668;Name=g4668.t1 NODE_322_length_26976_cov_42.9138 . mRNA 2123 10726 . - . ID=g4668.t1;Parent=g4668;Name=g4668.t1 NODE_322_length_26976_cov_42.9138 . five_prime_UTR 10376 10726 . - . ID=g4668.t1.utr5p1;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . exon 9254 10726 . - . ID=g4668.t1.exon1;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . CDS 9254 10375 . - 0 ID=cds.g4668.t1;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . exon 8485 9108 . - . ID=g4668.t1.exon2;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . CDS 8485 9108 . - 0 ID=cds.g4668.t1;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . exon 2123 8326 . - . ID=g4668.t1.exon3;Parent=g4668.t1 NODE_322_length_26976_cov_42.9138 . CDS 2123 8326 . - 0 ID=cds.g4668.t1;Parent=g4668.t1 #PROT g4668.t1 g4668 MHSYLGAVCLVTAMAISIFSVPTTAASHGSNYSNDSITVEMRIQRLVAICAGSDSQRKALTISDLIDAFFDGSNTTGDILSANGAVLDGELSYITWAANATSLPITLTGVLTKHGSTSAVAVEIFEGIFVNAALETYISTATHTTTVTLPIGVNGAPASVNASSLAQGVLAAVSTAFSQPIVAAVGKGASRHLALLAALEDIASFSRLGDATVDVSGHVTGSSTMRVPLASAANALSQLVAAPDEFLIPATAPHFRVIVAPMQPHWNTTSVDTIAPAFEGLSLVKPLYIVSSAASVANCPPFIGRRAPLPMSAGLTVVAKLPLDSIDVTRNIAFSIEQATSPLYADVVIPALPGDRAVVMFTPEQQHLSVGTGSIMLNPTAVFIDATGNGSLSFSLRADLSFSAYNMPTAKFQIEGRPELSSSNESLLSITGNLAFDSWIIAIGPSGLSLCADSVRPTFSGLLSGGSITGTIDGGVQLGDTSAPFSIEVTSTVDGAACVAANIASANNVTSMDVLAASFDSTSSAFGTDIPAQFAPAITERRVIIAQGTAYVNCGRLSLVASMAGLPPAYGGSANVTVNVYEFTTAIDWLNAVGQSSFFQGTLKSRQALRVFGRAAMKLSAGLSAVMLTPALIPFGFAVDLHATLTALAASISSMQHFELHSKAVALAASVVSLSASDSSAVQSYAGTIAMSSRKISLVAAFDPASTWTVTLADGLTLSPSVSSRPQYIASTLPQIQCSNWLCARGLNFVVSLNMSTFPSRSSMYVLSQFASQTSASVHAALSTPSPMFEIRFPSSSFPVPSIRASNIVAKVASNGSTTMGCILEVSIRGYGSVMRFAVDGLVGTAAVALGGALAEPYVLQVGNVGLTLIPGASSINITWNSFGGQIDAAAITARPTAAGRSIGVTLSMPFINEIYGGSAIVPFSVEATPNARVSVLDVLNALGGDNFGGLGTAVAPVFRALSARIDTIAGQIRPSAISTPLNGSATHPLSFVLSGYASGAGNASVAIDTRAVVPVVGVLSKLNEYCASVSSAVATVTLSNNGITSTVSVCVVLDALAVTFEGLPSPSTIFADAGTPVTYASPLCSYADAFVSIVPAIGSALPSSAAVRIDGLGWIPVWTVLRALSPVLESSRMFAARPHQDAPWSQWQVTAIAKHPAWTLADIFPLMTRVSSLNVSAASSPVVLVTNIAGRPPGADASLPVPSARGAWVVSASVSADDVVRSVFTNATRSYVGSAKNIAFIAPASAWATQFSLSSAPTQSSTTFLAEGIRVGNWVLDVPLSLTTGQMSLTGEIELLVGSAGAALSLPIASVPITAGGMQQTFITVGARDSVGVARTLPIGDDGIPLAEVHVALSWSLGEASSSVALSGSLTLSLQGQPLSVQLALASDGTITATGNGFPSMHSPCGTCSSNTICVSTSVQTGTYDCVPLDPCAIDNGGCGSPYASQCNVTNGTVTCTPLSVCSTIPDYCGELPALKSTCSATPGSVPNCYEGLLEITFTLAVAQTVTGCDGWNGMNGTSLAAWLETYVTSFLVAEGFQPGTIPADSNWTPVTSYFGACDATLIFDSSLLALLPLGELIFGDEVQQNQWAGFVAPAAEIAAISQITVVSVGGANPCESLSPSQCPGGTYCRPTPKYGNGVTIECAPVPRSCAFNNGGCGDPREYACVDGVLAPLQCVPQVPHVTLGSIAAVVFTKGVAAFGAAPEGLLDDIVGLPVDHRTATTTIDFVNATLSIDGTLRSSSANAHTVRVLIAPMMRCGGRGNVTCGPTGQQWTAVYQVAANPDPQSPFARAIAVLNISGAKVVLASGPAKLSSDFPGFSVPRGLSVVGNMSLTGTSVEIEAVSQLTGLLSLPAVAHMRSLSNYSVTAYLLGPAGVSIATNATFAVRTLTFKVEHDTMSGFSIDGSISARLGHSRNDVLQALPASIRIHNDGSVRLLSDDFEWHSPFGTPSVRLMAAQFSAAASSVGSGWIVAINATATMSRDISAPAFVSCAAVASASPLACTIAFALHSATLEELASLLCPSIIGQESNGNSFGRIARHTFFYDVDFTIVDGAESQGLVSGIVGNATFFGQSTLLAQFSAVPPHRFEVALLYSSMSFMSGYFTVTGPNQSALNITIILSNSTAVAMAPVKIANMTLGSEFVNESPVGTLSFSDAGVQIDLDAAPNGLWMPVTLQSLSSKTSPFVITDFSLNGIVLPDVFNATFYGNGIAASALESLIGGLVNQCASASAQVGSNNATYMQLYSSLAGQMATDINNLQQYASQVPNVTSIYSAGINAVTTSQRLATVSVYGAYPSYSAQTIGTPSLQDIATGSSTVPFATSQLAIVSVAQQLSNSSIQALTSLAGQISTLNGIVGGQTAQMGGQQIASGIFSSAALAWASQMGTALAMMDYYGGIAQGAGNMLPSLVALYQLTTGSLSVQRVATGNVTKTVDVNRKRYYGGEAASTFDCSVVPTGPAANLTDPTHAFFDATAHAECVATTWGKISKGSKAVTPDQRPDIASRVNASCAKTTTAARIKNMCAGGVMKVPVNETVAQGSWNVQWNAAQLPQSWTSQTQLQLQSSAQYAIGPNSNEFVSFRPVRAHVLGTVSALSAMTLPRMFLTATVAGSSAAIPFFVDVTSADASQYAFVASLATALQAQNTANIAASS* # PASA_UPDATE: g4611.t1, single gene model update, valid-1, status:[pasa:asmbl_254,status:12], valid-1 NODE_106_length_39485_cov_50.1466 . gene 1228 5989 . - . ID=g4611;Name=g4611.t1 NODE_106_length_39485_cov_50.1466 . mRNA 1228 5989 . - . ID=g4611.t1;Parent=g4611;Name=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 5922 5989 . - . ID=g4611.t1.exon1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 5922 5989 . - 0 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 5670 5771 . - . ID=g4611.t1.exon2;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 5670 5771 . - 1 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 5466 5562 . - . ID=g4611.t1.exon3;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 5466 5562 . - 1 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 5048 5341 . - . ID=g4611.t1.exon4;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 5048 5341 . - 0 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 4448 4934 . - . ID=g4611.t1.exon5;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 4448 4934 . - 0 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 2698 4310 . - . ID=g4611.t1.exon6;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 2698 4310 . - 2 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . exon 1228 2522 . - . ID=g4611.t1.exon7;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . CDS 1407 2522 . - 0 ID=cds.g4611.t1;Parent=g4611.t1 NODE_106_length_39485_cov_50.1466 . three_prime_UTR 1228 1406 . - . ID=g4611.t1.utr3p1;Parent=g4611.t1 #PROT g4611.t1 g4611 MDPLGFRSETSPPKIVPVKVRRKHLTETERLEIENRKMEERLQALKEALSREKEAREKMGGGIWRSGKQGALTNHAAQVLEKNKEKREKRRETQYKTLSDSGMHLEPLPDAPVPRPPPSLPREPAVPLVPIDPLGGSQSSRSRTCGQCEVGSASVSCIECKEFYCDECFVDIHKKGALRSHTVKRMQEDNLPRFDRSRRFKTTSRPQSAGGRSDTSAHNTDAMCDASPASNSLLEGTFDERESHHSFLEALNEWRGVTKKPAEKTSSAASTSAAVGESPSPPRVSAERAPATNVQPRMWNAEDSHATAADTVSSRGTLLEGDFNEDESHKYVLDALEAWRNKHGHGASEVPHQKPPAKPSVGIASSGIQTETGDADTRPKRKPTDVPIPESQQSLSYMERLLVKQYRKDPHVIERVFRSIIGDGESGSVEDGNATTESVVVGGSEGESSPKKTASSLEERLPPDSNPPPAAYANKIEATDVTEAPLDGTVEASANEPIVSEPPSPRAAAVNKANTFEFDASIEELNKAASAIQRQFRRRRSEVGSTTQGAPASPTPQNTQSHSAQQETFEFNGSVEDQNRAAALIQAQFRRRKSVQNVTSPVKSAAAAAARPSTAGALDSDRKASSDCNIAFNAPVAVQHKAASVIQAQFRKRQASLRDLNTASSRDNVSPKVDLPTDAVVPDVTSEASPSTSDAPVAPLAEPVQPAQETFDFGTPIEDQEKAAALMQSRFRMRKAKEKAAADKPPTEVHAVESPVVSAAPAIEDAVTTTEAPSAPLTEPAQETFDFGTPIEDQEKAAALMQSRFRMRKAKEKAAADKPPTEVHAVESPVVSAAPAIEDAVTTTEAPSAPVTEPAQETFDFGTPIEDQEKAAALMQSRFRMRKAKEKAAADKPPVETAETADAPVVPAVEPASNESATPFEFDAPLDVQNKAASIIQSQFRRRLSMQAMSASSDDVAKTSSAVSVSAQMTADVAEEPTPAVSAPSNPATESIEFDAPIEVQHRAASVIQAQFRQRILSKHNLRPSTSDSQSSDAATPDASDRPVDAPPSSSQPPQESFDFDAPLEDQHKAAAAIQKRFRMRKASATASTADLTEASVSQSVSNANLVPDASYGETTAADMSEDSMMRGNPDSPEDDEDRGGPLADDFGADDAEVGGVDAGHAHNTEVPHDATQEAIESQIELDPDMMDPTDGKDSRKSVHGLDENDLMQDFEEMERRVESEAAVRDDDDVEGDEPPADDDSDDANYDAGVEETSEMAE* # PASA_UPDATE: g4616.t1, single gene model update, valid-1, status:[pasa:asmbl_259,status:3], valid-1 NODE_106_length_39485_cov_50.1466 . gene 21532 28278 . - . ID=g4616;Name=g4616.t1 NODE_106_length_39485_cov_50.1466 . mRNA 21532 28278 . - . ID=g4616.t1;Parent=g4616;Name=g4616.t1 NODE_106_length_39485_cov_50.1466 . five_prime_UTR 28189 28278 . - . ID=g4616.t1.utr5p1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 28147 28278 . - . ID=g4616.t1.exon1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 28147 28188 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 27743 27950 . - . ID=g4616.t1.exon2;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 27743 27950 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 27488 27637 . - . ID=g4616.t1.exon3;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 27488 27637 . - 2 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 27250 27368 . - . ID=g4616.t1.exon4;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 27250 27368 . - 2 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 26825 26986 . - . ID=g4616.t1.exon5;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 26825 26986 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 25998 26684 . - . ID=g4616.t1.exon6;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 25998 26684 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 22679 25903 . - . ID=g4616.t1.exon7;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 22679 25903 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 22253 22571 . - . ID=g4616.t1.exon8;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 22253 22571 . - 0 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . exon 21532 22130 . - . ID=g4616.t1.exon9;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . CDS 21979 22130 . - 2 ID=cds.g4616.t1;Parent=g4616.t1 NODE_106_length_39485_cov_50.1466 . three_prime_UTR 21532 21978 . - . ID=g4616.t1.utr3p1;Parent=g4616.t1 #PROT g4616.t1 g4616 MAQILPIRFQEHLQLQNVGINAANIGFSTLTMESDKFICVREKVGEQNHVVIIDMADANNPTRRPITADSAIMNPTSKVIALKAGKQLQIFNLEMKSKMKAHVMVDEVVFWKWISVNTVALVTDTAVFHWSMEGTAEPRKVFDRHPSLTGCQIINYRVDAAEQWLLLIGIQAQEGRVVGAMQLYSVERKVSQPIEGHAASFAQFKLEGNSTPSTLFCFAVRNAAGGKLHIIEVGTPAAGNQPFQKRAVDVFFPAEAANDFPVAMQISEKFDIIYLITKYGYIHLYDLETGACIYMNRISSDTIFVTANYDATSGIIGVNRKGQVLSVSVDENTIIPYITNTLQNLDLAMRLATRNNLPGAEDIFVRKFNDLFGRQAFAEAAKVAAIAPRGILRTPQTIQRFQQVPVPPGGSPPLLQYFGILLEQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKQQDSTLALSVYLRANVPHKVIQCFAETGQYQKIILYSKKVGYTPDYIFLLRTIMRINPDQGVAFATMLIQDEQPLADINQIVDVFLEASLIQQCTSFLLDALKNNRPEEGALQTRLLEINLMTAPQVADAILGNQMFTHYDRPHVAQMCEQAGLYQRALEHYTDIFDIKRAIIHTHLLNPEWLVNFFGTLSVEDSLECLKAMLTANIRQNLQVVVQVATKYHEQLTTAALMELFESFKSYEGLFYFLGSIVNFSQEGEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCGEDVIKGLILSTRGVFSTDDLVEQVEKRNRLKLLQQWLENRVNVENNQEPATHNALAKIYIDSNNNAERFLRQNPFYDSRVVGKYCEKRDPHLAFIAYERGQCDDELINVCNNNSLFKSEAKYLVKRRDGELWAKVLVETNTFRRQLIDQVVQTALPSTNDPEDVSVTVKAFMAADLPTELIELLEKIVLEPNSMFNDNRNLQNLLILTAIKADRSKVMDYINRLDNYDAPDIANIAIGSELYEEAFAIFKKFGVNTSAVQVLINNIGSLDRAYEFAERCNEAEVWSLLARAQLDASLIKEAIDSYIKADDPSTYIAVIEAANREGKFEDLVRYLQMARKKSREPLIETELIFAFAKTNRLADLEEFISGPNIAQIQIVGDRCFDDGMYEAAKLLYNNVSNFARLAQTLVRLGEYQAAVDGARKANSTKTWKEVCYACVEASEFRLAQICGLHIVVHADELEELNNFYQSRGHFDELISLLESGLGLERAHMGMFTELAILYSKYRPSKMMEHLKLFYSRVNIPKVLRAAEDAHLWQELVFLYIHYDEFDNAVLTMIKHPSEAWNHAQFKDIIVKVANNELYYKALTFYLDSQPLQLNDLLTTLTPKLDHARTVSLFAKVKQLPLVKPYLLAVQHANVKAVNESVNKLLIDEEDYNALRDSIDRHDNFDSIALAQQLEKHELVEFRRLSGYLYKKNNRWQQAVELCKADRLYKDAIDYASESKDQSIAEALLSFFLEQHNNECFAASLFTCYDLVRPDVVLELAWRNNIIDFAMPYLIQVTKEYLSKVDKLHAHHEEHKDKHADAPAGGLHHFEPQPQLLLTGPGMIVPPIVPPMGLGGMPPMGMPGMPGLYQDPNLAFQPRF* # ORIGINAL: g4610.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 219 872 . + . ID=g4610;Name=g4610.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 219 872 . + . ID=g4610.t1;Parent=g4610;Name=g4610.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 219 446 . + . ID=g4610.t1.exon1;Parent=g4610.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 219 446 . + 1 ID=cds.g4610.t1;Parent=g4610.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 533 872 . + . ID=g4610.t1.exon2;Parent=g4610.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 533 872 . + 1 ID=cds.g4610.t1;Parent=g4610.t1 #PROT g4610.t1 g4610 NNTAKEGTDSEAAGARQHHPASNSRGISSILGDKAKESSAGQGSGPTAAKSAKDIVASQLPKLDYVTVDEFESVPKYMRGRMKREAVNQAIDAIHAAIASKYKIIATPRRQLGEAVLKKLKEYRAAENEETAREFFFVEEDLRGEGSAGAAGAKAGDVVNKTHLTVLRHLGRLRENRGGGYLRHVLSK* # ORIGINAL: g4619.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 33630 39373 . - . ID=g4619;Name=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 33630 39373 . - . ID=g4619.t1;Parent=g4619;Name=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 39358 39373 . - . ID=g4619.t1.exon1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 39358 39373 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 38667 39289 . - . ID=g4619.t1.exon2;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 38667 39289 . - 2 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 37862 37960 . - . ID=g4619.t1.exon3;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 37862 37960 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 37549 37626 . - . ID=g4619.t1.exon4;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 37549 37626 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 37287 37365 . - . ID=g4619.t1.exon5;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 37287 37365 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 37011 37051 . - . ID=g4619.t1.exon6;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 37011 37051 . - 2 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 36567 36716 . - . ID=g4619.t1.exon7;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 36567 36716 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 36167 36349 . - . ID=g4619.t1.exon8;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 36167 36349 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 35711 35852 . - . ID=g4619.t1.exon9;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 35711 35852 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 35290 35386 . - . ID=g4619.t1.exon10;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 35290 35386 . - 2 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 34927 35024 . - . ID=g4619.t1.exon11;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 34927 35024 . - 1 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 34439 34617 . - . ID=g4619.t1.exon12;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 34439 34617 . - 2 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 34083 34216 . - . ID=g4619.t1.exon13;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 34083 34216 . - 0 ID=cds.g4619.t1;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 33630 33741 . - . ID=g4619.t1.exon14;Parent=g4619.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 33630 33741 . - 1 ID=cds.g4619.t1;Parent=g4619.t1 #PROT g4619.t1 g4619 MASMLQRLAECRSKYPLLSRQVELLDHDDGDTPHNNPSHGTAHVPSGNEEAEGSPASQHTPDGVHPTMHKGHNRSTSAPLGFSANASTFNLGMNAGVRGSTASLDIDHHDGDHGNDRHPSLAAGEGAGASNSSTVDLTAANENGAGRKPQRQLSSILSTVAGGTNVFRRLKDFNYLRVPSSLSRKERLARKRTALKKAFEEFYRYLQLLREFQNSTTGLRRLVMAICGSETFETSEELAHMISQMEKMYTSSFFDHDRHKAMNHLRIPEDDKTYNWPVFRLGLFAGVSFPILLIGIVAAATIASKRDDWTSQIIMFRAMGIPIYAFWCFGLDALVWNRYHINYVFIFEINPRKHLSYHEIFEAAAVLTMLWSLAFLCFAYGWSLGSIDAQWYAPALAVLLLLLLFDPFRFFYRSSRAWLLRRLGRVVRAPFLAVEFADFWMGDQLCSLVICLQDIEYMACYFVYDIFMAPEDRMCRSNRTGIRIIIAILPSLWRLLQCLRRYRDSKNRVPHLPNAGKYLTAILVTLCASLDALFRESNPSANWDDFRTAWIVMATISTIYNTYWDVFMDWSVTARPITPKDPNPGFRGNLMFRKSVYVCAAIIDFGMRFLWTLTIAPAAIGILIQSDLFVTALAIAEVSRRCVWNIFRLENEHLNNVGAYRAIRDVPLPFPEKNMS* # ORIGINAL: g4617.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 29035 31714 . + . ID=g4617;Name=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 29035 31714 . + . ID=g4617.t1;Parent=g4617;Name=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 29035 29614 . + . ID=g4617.t1.exon1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 29035 29614 . + 0 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 29723 30001 . + . ID=g4617.t1.exon2;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 29723 30001 . + 2 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 30098 30373 . + . ID=g4617.t1.exon3;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 30098 30373 . + 2 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 30640 30805 . + . ID=g4617.t1.exon4;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 30640 30805 . + 2 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 30943 31015 . + . ID=g4617.t1.exon5;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 30943 31015 . + 1 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 31151 31326 . + . ID=g4617.t1.exon6;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 31151 31326 . + 0 ID=cds.g4617.t1;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 31477 31714 . + . ID=g4617.t1.exon7;Parent=g4617.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 31477 31714 . + 1 ID=cds.g4617.t1;Parent=g4617.t1 #PROT g4617.t1 g4617 MTSNIVVQSPSVAEGAADAEAAPPVKRQNSVVFVVPPHVEQQYTSPDHRRSVASASKALTLSPPTPTSPWKKSPIDWAAARQSSQKAPERPLTSSLKGTKHTAPPPPIVTMTSQTSFDMHAMIGAFAAAHGLKGGDSHSDVIRDGRTVTVSLATDADKAPVLQSPPSPRKARSARKVAERPYYEGDAIERLRNGKGKYYYRNAFYTYEGEWVNGVKHGNGKLSMIDGSSYEGSFENGEISGFGFKRFANGNTYSGQFLNGELNGHGTMIYRDGNKYEGEWKRNSRDGEGVITDRRGNVFDGTFRRNRMNGRGTFLGRNGEFYEGEWRDGVRCGYGRVTLASKAEYEGEWSNGQENGHGTLLHPSGVSYDGYWEAGRPVALATQCVPYVARFEIKHDDMFTLSIECQDDTEETIKQESGRLIRITVVKTEHRPARVDSAHQQRPNTANKGPNAKDKRPQNHLASIPKRTSVAGGPQAAGGDRRTSVFPGSQLPPPPPQQQVPVESPTVTTPETETPAKVSDGVHLDYVPGGFVDHTENDKTLDYFEARTKNGVVIFANVQLSKHTHGETEISIVEVTEPMYLGKRLRPSAVQVLLS* # PASA_UPDATE: g4612.t1, single gene model update, valid-1, status:[pasa:asmbl_255,status:3], valid-1 NODE_106_length_39485_cov_50.1466 . gene 6542 9097 . - . ID=g4612;Name=g4612.t1 NODE_106_length_39485_cov_50.1466 . mRNA 6542 9097 . - . ID=g4612.t1;Parent=g4612;Name=g4612.t1 NODE_106_length_39485_cov_50.1466 . five_prime_UTR 8962 9097 . - . ID=g4612.t1.utr5p1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 8791 9097 . - . ID=g4612.t1.exon1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 8791 8961 . - 0 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 8540 8664 . - . ID=g4612.t1.exon2;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 8540 8664 . - 0 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 8365 8383 . - . ID=g4612.t1.exon3;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 8365 8383 . - 1 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 8099 8231 . - . ID=g4612.t1.exon4;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 8099 8231 . - 0 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 7716 7864 . - . ID=g4612.t1.exon5;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 7716 7864 . - 2 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 7398 7532 . - . ID=g4612.t1.exon6;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 7398 7532 . - 0 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 7067 7235 . - . ID=g4612.t1.exon7;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 7067 7235 . - 0 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . exon 6542 6902 . - . ID=g4612.t1.exon8;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . CDS 6679 6902 . - 2 ID=cds.g4612.t1;Parent=g4612.t1 NODE_106_length_39485_cov_50.1466 . three_prime_UTR 6542 6678 . - . ID=g4612.t1.utr3p1;Parent=g4612.t1 #PROT g4612.t1 g4612 MVSWSDITPAEVEVGPTDDMASLEKILNGGILVGLYALLFCYCGFQLGLILYHRHKKASYHTYFLLLCLSWITLRIIFFGIWSHDLGLPDSWAIRLIYWLPLHIQFATFSLLVLFYAQVIHRENWVQKFRVIFVASWVAVNVTLLALFIAWLAVVGNRDEPTASEVNLRQGASGVLFFILITVLGVYGWKLQRIMRDTKSTPIQVKGTTRLSIVLLTSLILVIFVTRCIYNFVTAFGTHHHVFGGNTGATIFAFCAFVLWEITPLFAVTFFFRHIPKSRPTQKGVRRPLLSPDPSVPGGEERGFFQNPNRYDELDEDAPSGTGTVEVVPFGAGSGALSGSYVGSYGQHAYDHVSRSFHSTPSYTNPYRQSYDSS* # ORIGINAL: g4618.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 32146 32991 . - . ID=g4618;Name=g4618.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 32146 32991 . - . ID=g4618.t1;Parent=g4618;Name=g4618.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 32146 32991 . - . ID=g4618.t1.exon1;Parent=g4618.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 32146 32991 . - 0 ID=cds.g4618.t1;Parent=g4618.t1 #PROT g4618.t1 g4618 MADNAKTRSGRARKRRASEVATADDGKHNDALVDLTATKRPKTHDGDSALDIMAAVAAQADFVETRAVHTKSGDASIKDETLDAVTTPVEKASSAPDAPVTTNLPAESPIVAATVTSTASSSSIGGTTGSIVPVNGLPVPPPTTDRVFISLPPLEQYDGDQLMTVASATVSPHPIIAGGNSEWTLHVRISGVIAKESYAEMRLWRPIRFPLPTIKLKDVTTWDFQPTDGFVVIKATIKPPLPAAFTPAGRYIVSVDIVDPMRERSKRRVGSTLISFRVEKA* # ORIGINAL: g4614.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 17560 19643 . + . ID=g4614;Name=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 17560 19643 . + . ID=g4614.t1;Parent=g4614;Name=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 17560 17697 . + . ID=g4614.t1.exon1;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 17560 17697 . + 0 ID=cds.g4614.t1;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 18407 18618 . + . ID=g4614.t1.exon2;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 18407 18618 . + 0 ID=cds.g4614.t1;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 18738 19335 . + . ID=g4614.t1.exon3;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 18738 19335 . + 1 ID=cds.g4614.t1;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 19518 19643 . + . ID=g4614.t1.exon4;Parent=g4614.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 19518 19643 . + 0 ID=cds.g4614.t1;Parent=g4614.t1 #PROT g4614.t1 g4614 MRHCPRGVVEALAGFQSASAPNHRRILQHWMQRRMEERLLAHTETKPVRPGVMHQLPLSARLLHSVSFPNAPVWSISFVEDAHSAGSALYICAPNAGMFRWSYETDNQLVCFLNSIRGAIPFGDGEILAVCLFVQRERTAGTALRMFCTVCAESGMHQSAGASLPHQKTLLEIPVINVHSDNSLAVSPCRRALAVCVCDGPTGLTTSILLTIIDDDALRAVSSGAFCHMPHPKVGGDMHTLQCLSGTARLPVDDGRPLQQLATRVELKLPQHCSGLVTCMRFSPSGRHLLVGLGADREGALVYKIKDTLDRFVNDENPTHISVDAKCINACNFLADSMSGFVVGTDTGRVIHFFMGA* # PASA_UPDATE: g4613.t1, single gene model update, valid-1, status:[pasa:asmbl_257,status:12],[pasa:asmbl_258,status:12],[pasa:asmbl_261,status:12],[pasa:asmbl_262,status:12],[pasa:asmbl_263,status:12], valid-1 NODE_106_length_39485_cov_50.1466 . gene 9365 16908 . - . ID=g4613;Name=g4613.t1 NODE_106_length_39485_cov_50.1466 . mRNA 9365 16908 . - . ID=g4613.t1;Parent=g4613;Name=g4613.t1 NODE_106_length_39485_cov_50.1466 . five_prime_UTR 16861 16908 . - . ID=g4613.t1.utr5p1;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . five_prime_UTR 16386 16436 . - . ID=g4613.t1.utr5p2;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . exon 16861 16908 . - . ID=g4613.t1.exon1;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . exon 12329 16436 . - . ID=g4613.t1.exon2;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . CDS 12329 16385 . - 0 ID=cds.g4613.t1;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . exon 11847 12128 . - . ID=g4613.t1.exon3;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . CDS 11847 12128 . - 2 ID=cds.g4613.t1;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . exon 11281 11675 . - . ID=g4613.t1.exon4;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . CDS 11281 11675 . - 2 ID=cds.g4613.t1;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . exon 9365 11038 . - . ID=g4613.t1.exon5;Parent=g4613.t1 NODE_106_length_39485_cov_50.1466 . CDS 9365 11038 . - 0 ID=cds.g4613.t1;Parent=g4613.t1 #PROT g4613.t1 g4613 MAACTTHARSLGASARVMCPRARNPKPCTAIILLIGLMVSSVASASQCFDYDRLRNGLAVHIPFDGDFRDASGNGVHGSQGNPPSFVAGKVGSAAASFDQLQRQFVSLGRPASLNFDTDVDFTVTFWVRAAKVPLNIDRNSYDDPAIIGNQNWDSSRNRGFIVAGSAPSSFIFAVGDGVRRTKLTQAVYFAQNEWSHFLISCNRSSNAVVYANGKLLAVVDIYNMAGVFVHNFTSGYDTVIGSDGPAGVIYPTWWDGEIDDVAIWRRALSSSDAAAVYARALKGLDIHSGLPMDCADTIAACDDDNGVSPLSFRVSCPGGCVPYSNANESVSSIFPRSASVCGAAVASGLASVSAQGPRATVTVRVDSNGVGYMLESVCGDGIQMGAEECDDGNADDHDGCSRCTVDSGYVCGNAADSSDRSCSTVCGDGAVTGMEICDDGGESDTCTSDCTVKPGHFCTSQLTARSAPTMLCRALACGDGVRSIGEECDDGNVLDGDGCSSSCQVEENWACKSLHGSAGERCNPPLWVASGGDDSGNCSARTPCATIHRASTVAAAMPGIAYIMVGEGVYNCTNPIAPVLQPEGSLMLRAVSGNVVLTCNGFGMAVKVTGGNLVMEGITVQNCAPTGTQQAAVVVLNGNATLTRCTFVHNSISQTSKTPRARAAGVFVQNDRAVMYSAAVFESCVFVNNSVSFRNTAWAIFQVTEAVQDSSVAGAAVAVNGTQSVSFTRCTFSGNGAYSSLAAGAVYISYYRNAFVRAAHCIFEDNAADGERESSGALFVSSAHPIQYIDRPEVSLENCTFRSNRAIIRSHQNARFPRAVVAGGVGISYMAPVCTRAKHVVSNCTFDDNSVSMASYTYSLASGAIGIHSSCAGKTSDFEIDVRASVFTRNQASAESVDMSAVSGSIGLFSYRGLFSHNTVSVSGNSFSDDFASIKDGLNCGAGGSAVIATVMTPNQFGLDQLRVIDNSYIFANNSHLSPAVDAAGKLGMAVAGAVCMFHYTTNGGPVYVNNSLSVTGASVLFAMTGLSASLQSVAASGIAAFYFGATVSNSHTISGSIFAHLNGSLATTGTNCLGAGAVALYFSSLDAWSSLNIERTVVTDSRFSIQAGSAAGAVGVMCDAAARGLRLSVVGCTADSNECPSGSGVIAIVAPTGSDISSNLVGSTFTKNKGGKGAGVIRMNVLQGSSTIANCSFDRNVGSDAGAVSLQVVENGHFSAMQSAFHRNVGSVAGGAISMEGVSGNVTDVKFIENEASIGGAMFVGRASGLWANRCLFQRNDASSGSDLYSGGSMSLVLIGCVVEAVRAVTTVAVLGSPDMLLRQNSSVTCPRGHRFQKVQTRNGLQLLCSKCQQGSYLIANGTDAMDVECAECPTGAVCAGGDDIRPIAGHWGTPGVTKKSYMTCPLGLCCATVGECMAGPCMGGHVGIMCSECPSGMSTTLMKRECVDNARCEDGKWFLPLIALVMVALFALFLMLPVGRSGMLRIVMGLVYPAYIAIRLQGNDSAESVAVLNGLVTLQFAVAPDLLTDVCLFPGFTPLSGIFIQLYAPLVLVGVAAVYVLYWHFGRALVDALRGRARETATPFPYDALYAVGWVAFPPIWATVLRLVTCTSIDGEERLYEMASVVCYNHGWQIFAFISFPLFVLVAPGALYVAIRLRPRIATIDANPAKGGNGDSAVVNGKAVVYKTGEGEKQIVTGRGPIALGLVGVVASSPYRAEYVFWDLVALSFQIVFSLCGVLIVDAGIKAFVLCFLVWFAFMFTWHMCPYRFNGDACFEVAAQFALLVIVTLQIRGATVLSLGLSDTFLSKGVLRDLGTFFVALQCICLVTSVLAISFAILRFVMSGAKLSPLMEKLMSWSQRPAEGWAHTPVPRPKKSLYELEKLRRPKRLKSVKSKERVEQANEKSKAFFGDVVLSTADSGSLQESQTTGIDSEIEVGFAPDEANSHGDVGAVSSAASDDSPTEGSADWAVHRPAQRRVSFCPDGGGGLASEDNQNGSYLSMTRTEDMPNGRAKLPLTRNFSAPGGSRPVRSSLRTGGRQRLAGTMSDTAALMAMRARAASRRSAGGDNVDPAAGNFVRSPSYSSALSLADAASQRDITAVTGSKPGSVDLFAVRSQVSLADIHFVRGVDGPLESTI* # ORIGINAL: g4615.t1 original gene structure, not modified by PASA NODE_106_length_39485_cov_50.1466 AUGUSTUS gene 20224 20856 . - . ID=g4615;Name=g4615.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS mRNA 20224 20856 . - . ID=g4615.t1;Parent=g4615;Name=g4615.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS exon 20224 20856 . - . ID=g4615.t1.exon1;Parent=g4615.t1 NODE_106_length_39485_cov_50.1466 AUGUSTUS CDS 20224 20856 . - 0 ID=cds.g4615.t1;Parent=g4615.t1 #PROT g4615.t1 g4615 MKFEKERPMKMPLPYSTAPTFYVRRLATPDGSASDSDTEKRTAQLEKNRLAARVSRQRRKEYVTTLEERARELELNNETLFRELHELKKWICFRFPQVAAAADPDGQARAHLESQGIHLNGSIQHAPMPFLHKDESMEADDEECDDGDASSDSSAVNDQDIVLAQFVNQPQMRLSLHQQIMSANAASCGQFASRLGPFGAMAGVSQSVGM* # ORIGINAL: g7035.t1 original gene structure, not modified by PASA NODE_2058_length_7890_cov_43.5976 AUGUSTUS gene 116 287 . + . ID=g7035;Name=g7035.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS mRNA 116 287 . + . ID=g7035.t1;Parent=g7035;Name=g7035.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 116 287 . + . ID=g7035.t1.exon1;Parent=g7035.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 116 287 . + 1 ID=cds.g7035.t1;Parent=g7035.t1 #PROT g7035.t1 g7035 IAENGAVNKMLPTNLAIVFGPTLMKAENETHEMIINMTYQNQFIEYLIVNKDIIFD* # ORIGINAL: g7036.t1 original gene structure, not modified by PASA NODE_2058_length_7890_cov_43.5976 AUGUSTUS gene 2366 6773 . + . ID=g7036;Name=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS mRNA 2366 6773 . + . ID=g7036.t1;Parent=g7036;Name=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 2366 3623 . + . ID=g7036.t1.exon1;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 2366 3623 . + 0 ID=cds.g7036.t1;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 3941 4636 . + . ID=g7036.t1.exon2;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 3941 4636 . + 2 ID=cds.g7036.t1;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 5155 5681 . + . ID=g7036.t1.exon3;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 5155 5681 . + 2 ID=cds.g7036.t1;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 5899 6268 . + . ID=g7036.t1.exon4;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 5899 6268 . + 0 ID=cds.g7036.t1;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS exon 6583 6773 . + . ID=g7036.t1.exon5;Parent=g7036.t1 NODE_2058_length_7890_cov_43.5976 AUGUSTUS CDS 6583 6773 . + 2 ID=cds.g7036.t1;Parent=g7036.t1 #PROT g7036.t1 g7036 MTGVKTSLKQRPPAGASVSSQLVADAVLPFVRWWSCLVVAAIVATGIVLPIIVHKGLSRAEARNLQDQLEMTARGEAQNVQDTFKHILHSTENIRIALNLAPEGGLSYQQFNESLMLLKRPSDSSMTFIWVPLMTSEKRSAFESHVRAINANSGQYSNFSILDVVMSPPPPSSTPPRFDPMTQLNTTPAASGRSLYLPLLYAWSADGRLLVDDSFIGTDMLLSPAVDNLPHSIESGEPNLVTNLIFAGDRLTRGTLLLVPVYRGVATPTTAEGRRAAAIGFLGVAAGASRTIDCGRDRMYNGSLRISIFDEHGLVYCGTDDCVAAGRLPANPAGVASVHGARFETTITIWGKGFPFVAVPTNALVESVTSSSPVVFAVLTGLGCAVLLAGAIVAIRAIVLTQQRMDTSERQRRRVTDMIGFVNHELRNPLNAIMGLIDHATCATEDIVAASALGKGNSTSAPVAVGTATSGAVQENSSSKSAARRAPARPRSNSAGPLTRTKSSTGAVTVTSAAEKMSSILQDLRDTGQMCSLMKHIIDDVLDIRRLEERGLKIVSGPVSLSRLLEDVMAIVQPKLSEKPTLSLEMRSFDSDAVFRTDSVRVKQLLLNLVVNAIKYSDKGVIRVSVELVDGAGIDTAAGQRIRFTVQDNGKAIEDSKKKYLFQPFMQLNGSARHQGVGLGLYLCSMLVDIMGGDIGFESTVGVGSIFWFELPYEATTMGDVDLCTCDDGASESSECDHEERRRTAATANNNNDYQDGHHVHCEPESVTVTVAVDVEGLQHESVALNMAGDYMDVARDAAKGLAIDMPLCGCAEYISEIRMEALPSTKPPASAQPVQTTPVPRAHSDSNNARLRSAPSTPDNQSTVNGSLRQTTTRVTAGPTVPATVTPRRHLVCDDLAVNRVILKRYIQSSFPGDLVDEAENGLVAVALAEVTVYDLVWMDVQMPVMDGIEATKRILGTSRCSPHPAIIGITGDITAEEVAHYHSVGMHDVYGKPVTRGNIVEIVRKWCQRRT* # ORIGINAL: g3134.t1 original gene structure, not modified by PASA NODE_4709_length_1305_cov_33.6252_potentialcontaminant AUGUSTUS gene 59 742 . + . ID=g3134;Name=g3134.t1 NODE_4709_length_1305_cov_33.6252_potentialcontaminant AUGUSTUS mRNA 59 742 . + . ID=g3134.t1;Parent=g3134;Name=g3134.t1 NODE_4709_length_1305_cov_33.6252_potentialcontaminant AUGUSTUS exon 59 742 . + . ID=g3134.t1.exon1;Parent=g3134.t1 NODE_4709_length_1305_cov_33.6252_potentialcontaminant AUGUSTUS CDS 59 742 . + 0 ID=cds.g3134.t1;Parent=g3134.t1 #PROT g3134.t1 g3134 MTCDVDQLSQSMTSGDTLEQWQTVVYLLACAAKDDKVLAKLLAAGNKGNGYCVGPITKAELGEVKMPGKRSTTSVFRELPESHDDFLQNVAEGLEGLRNTRSSEVPEKAKRHTSRKPKTDFELATKLLTRRVAPELDRCYIACFRSPDELPFADVFLFIGNTLLLIHVKGDDGESYDTSAYHYKRGSTLNHRLESIARTRTFSSQLLVFASLSSSLDEDRKNYFTLG* # ORIGINAL: g598.t1 original gene structure, not modified by PASA NODE_354_length_26229_cov_42.5361 AUGUSTUS gene 20954 21714 . + . ID=g598;Name=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS mRNA 20954 21714 . + . ID=g598.t1;Parent=g598;Name=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS exon 20954 21292 . + . ID=g598.t1.exon1;Parent=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS CDS 20954 21292 . + 0 ID=cds.g598.t1;Parent=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS exon 21436 21498 . + . ID=g598.t1.exon2;Parent=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS CDS 21436 21498 . + 0 ID=cds.g598.t1;Parent=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS exon 21634 21714 . + . ID=g598.t1.exon3;Parent=g598.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS CDS 21634 21714 . + 0 ID=cds.g598.t1;Parent=g598.t1 #PROT g598.t1 g598 MSALVRSALWRRPISYAMPLSMSLALKFGGRVDAALLPVAATCALSQVRHARTLPPALLLDAVHTLPLELNAKAPGAKTPTPQSVRTGVLARKVGMTFEWDLWGKRLPLTVLQLEDVQVVSQKTVEKHGYNALQIGAFNVHSGRSVSRTVKVGYVAVIAL* # PASA_UPDATE: g599.t1, single gene model update, valid-1, status:[pasa:asmbl_6203,status:12], valid-1 NODE_354_length_26229_cov_42.5361 . gene 23052 23629 . + . ID=g599;Name=g599.t1 NODE_354_length_26229_cov_42.5361 . mRNA 23052 23629 . + . ID=g599.t1;Parent=g599;Name=g599.t1 NODE_354_length_26229_cov_42.5361 . exon 23052 23099 . + . ID=g599.t1.exon1;Parent=g599.t1 NODE_354_length_26229_cov_42.5361 . CDS 23052 23099 . + 0 ID=cds.g599.t1;Parent=g599.t1 NODE_354_length_26229_cov_42.5361 . exon 23284 23629 . + . ID=g599.t1.exon2;Parent=g599.t1 NODE_354_length_26229_cov_42.5361 . CDS 23284 23487 . + 0 ID=cds.g599.t1;Parent=g599.t1 NODE_354_length_26229_cov_42.5361 . three_prime_UTR 23488 23629 . + . ID=g599.t1.utr3p1;Parent=g599.t1 #PROT g599.t1 g599 MAGRMGGKHSTQLSLEVFKVNNKFNLVFVKGSVAGPKKSVVRITDAHRKKPFAAPPFPTFLGDVSLLPEEIVAPVTDRDPGSQ* # ORIGINAL: g596.t1 original gene structure, not modified by PASA NODE_354_length_26229_cov_42.5361 AUGUSTUS gene 652 15606 . - . ID=g596;Name=g596.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS mRNA 652 15606 . - . ID=g596.t1;Parent=g596;Name=g596.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS exon 652 15606 . - . ID=g596.t1.exon1;Parent=g596.t1 NODE_354_length_26229_cov_42.5361 AUGUSTUS CDS 652 15606 . - 0 ID=cds.g596.t1;Parent=g596.t1 #PROT g596.t1 g596 MADMSLGTVERLQRIREVRPPKIIEFIDSGDNSRHKDSAMDINEPLFQPFPSEAVFHLYEPFETHEVPLSLRNVDRVARRIKVVSPESPYFSVVPPKNAGAKIAPGMDVTYTIRFKPEMKSDYSCEIVCITEREKFVVPVRAIGARAMLDFPDEISFGSCPVKHSSTKTLLVRNIGDRHARFMIKAEDPFGVSVADGQLDVQGSMQIDITFRPDAVSGYSAELSIQYDTGECIYVRLVGSGDDANVRLEKTTLRLDNTYVSLSSQRTVRIFNRSDIMVHYCWKAAATEAEEVRLRERFAIDLDQTEKEEMELFREIVSADPTQQGHVSLLSRKFKNKRKAIANDKMQYSDDIYSIEPVEGDIWPNSQVEVTVVFRPQEAVNYTRTVYCDITGRETRLPLTLKGQGIGPKARFSFDALDIGSVFVNSAHRYEAVLENKGDIEVPFKLVPPKTLFGPKFTFTPSHGRLLVGSSQAVQIMFKSDQLGDFSEDFVWALEGSPENLTLNFSGKVVGPTFHFDAREIDFGTVSYGFINTASVSLVNTSRIEMSYRLHVPADGEGGASKEFEITNQKGVIPPQGCDLIQIDLTSVTLRNYEVALAVDVAGVGEEVLSIPLRAHCVVPEITMATPLLELGKCYLGYQYEKMVEMVNDTDLPARYELCNWEGSRPATPGNPVVAPATEGGSVSYECDNPRGIIAPHSTQRVMLRVTVHEMGSIEAVARFRIAGSEGAPLQVLLSAVGVGPAVTVDSESLDWGRVPVLKSSTRTLQLTNASLIPAEFQCSLAGRKSVFVADVLSGVIAPKETATIVITALLDDSVRFTDKLTVAIANGATYSVALAATGFGSTITCDQALESIDFGHHFSNRPCSREFVLENKGRRSQVLSWMVDKGAGRRIRTATIDASNNNNTNNNTNSSGTVTKGKGEGGHGSRSVFTVIPDRVTLEPGARQTVVLRGFSAHSQEVKEKLVCLTQIGKGTNKESIIELLAAAEFIDPLLKFSDPALTFFYEYQPDAPMQPQVKSMTIRNVSSLPLTATLRTSFPFQLLSQADVRLESNDEIPVEVRFDPAYKSDYHSKQEHGRLTVSYGEHPQKDGIDLNASVSFPNLSFETTSVDFRCVLNDTEATRTMEISNPGPLDVTYSWSFLDDERLQMGAPGLQLSIDDISQVFDIMPLRSTLKAGQTESVRFTFYGHCDGMFNAVAVCDVVGGPQYEISLSGQASTIRYEIDKRHVDFGMQAYREKVEAEVFILNSGRVAFDFSVLSVAASDSQGQPTRWKALSASPMSGHISPMTKQRIVVTFSPAVPEKFSGFIELQVAHFEPERITISGEGVFPRISLELPREDDGHIVPVSEDRTSDAERERLAVKRHAMEIVEKGLDRRPRGMSTNAPHSDSIGASLAAQSMINTAAIPSDTTHVRVGPKNGPTKPVLATYVLDFGNVVRGGSSKRAVRVHNPGHGAVTFTFDKRALNGTGFTVEPERIKFLPSGSEHIEVNVLLQTNVKTTNPGLLEVLVPVDILNGPAVLLRLRATVIVPDLIMSCDTLDFGTLVCGTAKVMTVQLHNTKPVPCEWRYVKDEQKAPPGTRAAQDKTTKPAHSFFTVQPNRGTLEPDQRVNVRVQFIPEGEQPYSAKLPIRIAMNQRPQVLSVVGAAVLAKAEISASVVELGPILPYSSGAETSITISNPHDFSIEVFSVDFDKQHLEEEELLRKVEGYDKGQLLLPPRAPGEGLPQEIVEAYTTKPPSADDAIGAAAAAAAATATATTTTAPGAAAGTGVPGTAVPNASTAANTSPSAAVAGAQPSTVPSAPSPTPGQRDTTSAAALAATTSSGGSTTPGLLANAAAIAGGSVLAQSMNLGSSSLAGISQAVPTTSGAPVPPTTSTDSDAAGKEHNHTVEGEGVGELVSPVQAAVNRYLASMSPNKPTHKLDLGVNVVVYGPPLSGKTTQSRSIAGYYGGSVISIDETVVAAMCEEGEVAGASSLREFLSSTPEGMSLLQGVHQAASTANAASVANGGDAATAHAAGLAAAMAMVASLTVPVVKERVEKEKGDKEKEKGEKEKEKEKGEKEKEKGEKEKEKGEKEKTEKEKGDKEDCGKKEAQQPPEPEPAHFVLPENVLVEVLLARFARADCQKAAIVDGLDTRFAMGPEAALTAVLRAFKGRRRVFFMSINVDQRVVHEREVLSNRQRSEEYAMRKSVLDWPEISEDEYDHLNDTEKEAYDERRKARKRILQEEMRRRMEEEKKEMEAAMLKEQKHEEERSKKSKANNNNNNNNSSSAAPGTTGGNAAGAAGGNPGAVGGNSGLNVLGVNGGPGGKDEKRRISINPNKNQMKRKDSMLQSAMDKMRDSAKSPSGGASPTRRSDSKFSLDAVLDKLTLSGEHKRTRSRMFDVDMKGCDEDAAHVTAMSARLVARLAAFELTREAVAALVSSWDRTRNGIPCPVPAPGAPVPPVPGTAGAGDVPATPALFGAKPPVFDRSHGKNPPQMPGAAAIGLGIPQPVPSRSRLGMVPVVEMLSPKPEVSEDEPCEDEGLDAEVPILDVDGAHDSEDVRTSIMEHLPQVRELEEEAAIMAMRIPPPALFSALRYPSVRKPRGAVEHFILAARDMSADDDAAHDQEVAQAAASSRGGDASATREGAGTSSRMSDRGIGSISAGDGTVGKKSFKMLSKAAAAAASSTATKPENWSKITKDLQTVTATATDAHDEDAKAAVYRWVIPPKGSVDVTVRFVSEEVGRFEERLVFETVGSGMQFRLTAKGTCQVPELETDLKCLFPVSRKTRTEEDIVHKEFIEATDTFEFGPLLCGKSRDKYKEGRFPGNMERFSLTNSGGLECNLSVCFQHDTTLNCFLLDPPNLTLRPGETKEVTIWAYPKVAGFFEDVVICCVKDNPDPLTFSISCHGVRPELELDKKMLSFDRLLLKRRETRALHLKNNTLLPVSWRLQGTDSLGEEFSVTPTQGTIEPKTECIVTAAFHATKPIVVKKAVRLEVSDVEKIYGVVQTETITVAAEAYDVAIDVHFPKNCDGGLDFGVIKVYEEAKHTCTLKNKGKYEIGFKFVFDKTETDIADISDMFMLSCETGQVLANDKPFPITVAFRAQREVAMRECPALKCLVMEPQTGELIATIPVKITLRTVFSRYAIQPIRDINFGAMVFNTKKSRSFTIENQGEFEFKYALFNMTDGGDFNRPRLGQLSQLQRNNLRTGSRTSLSKPPQPVKPPRRIDTKQESGRLTLGIFNVSPASGVVNPGSSQVVTVECHAETAGRFEELLGIDVSDRQPEDNPNGIEYKLVAESCVPGINTTEMAAVFEEHSVVRRLDLFNMQRNVYSEEDRVFLFGAFIAGQQAQVRFKISNPHKVPCDVVIACRPRSKTTTADFAFDVEPKRLSIPSHEHRYVTVVFAPSAMQAYTGIFEATVENGSNTKTKTLSFELRGEGTLPRVSIVKPLPRSGRVATPLLQFRRLLLGREQTLPLVLRNDGIIPATVHLDLNAADPASLRSFSCPRAGMPVLIHNGQSQTFNVNFHPNDAGRFGGELRMRVQDNQFEDTVIELGGEGYMDDVAFDNLPEEEESDLLPFGDCAVGESRSLSFTLSNHSSEAARFEFSCPQGEFTFHPMVGHVKARSSRQITVTFLAHQTQEYRNVPITCRVVKIAYADPASAGEWDDSARTVRWAMVRDERGKSQPKKVVEPEPEPAYEVIDELPTTELSLRACAIADNARFKCETTTVQFRNTLMYQTRAFSFPINNTGIVSLKYQWNITDDLVDDESPADIPFSVHPSSGVIEAGETAVFSVRFSPADVRDYECSMQCNVTNLDPSISPPRISLRGRSLRPFCHFEVEESDYITGGRRNPELGAAGGPGTLLDPTTRVIEFGSCGVRVRNTKKFYIVNPTNMTYEFSWECEDVPVPGQGPVFRCVTPKGTVLTGKKTEVVFEYTPETLDLVESFWRFRIGEHNIQIPFLLVGHADEPKVYLDRSNVNFRAQLLNHESKEIVYLINNESVPFSFAFSEASIRGDTSSALLSVSPLTGTVPPDGRIPVEVRFAPRQEKELNYNIVCSIKKKPTPVTLNVKGEGYAIHEAVLSELSDGRLAELVASTQNSLDFGEVQINERSVRQLTIGNAGKYNFDFSWKLDAHGHGRPGPVPISISPDSGTVLKGDRVVCEVTFHPHGRASTAHVEAVLKIANGPSYPIVIKGNGCVPNLGFSFTSHDFGPCFVHKPGMPTLQKSLQIINRDSREMSIDCLFASKPHLEVQAPPIILSAGESCEIPIVFIPRDAVHYHETINFEVNGLSRFAVEIKGSGTEFKLEPVNASNKVVAFGALRVGHTATRSIKLVNKSVVPMTFTIGPQQALFALRRNCVTVSLPLEYTLKPKATCNVELAFNPDTRLAPFTEEIHAESMGLSFPLFAVTGACQGIDIKLDNDNVPFGAVVQKSRSTRRVVIQNIGDVGARFKWDPKRFAPDFTISPLEGYISPGMELAFEVVFHPDELNNDVRYEDIPCEIEGSVPLTLTLTGMCVAQPPQSEVIRFNAAVRQRETKSITLTNKTPQRWYLQPIIDSEFWTGPESISIEPGQAKPYEIAYTPLTMTNDARHSGTVFFPLPDGSGLLYNLSGTADAPKPSGTINREVPCKTQYTELLPVTNWLKRPQRFKVSIEVSKPDSSTSLKGVDYIDVPGQMRRDYKLNFYAYKEGVTNARVVFRNEQTQEYLYYVVTFKATPPGVISMVDMTTPVRQSITRTLTLENPLSTPVQLTCSCSSTDVIIPHNVVLPATSEGQIPIEYLPLRVGDQTGKLLLTSAELGVYQYDLHLVATPAGPERSMQFKVGLGASQVQTFRFLSFAKAKTEYTCRIDSLDFTVDKTVAAPANTGSAGIEVCVDVTYEPSKLGDARTTLYLSSPTGGEYTCPLFGHCVPSKPQGPFTIKAGTTASIPFKNVFAASHSFTFTVDNPAFSVKPTETIGAKKTFNVQITYKTNTPKVPRMGKLVVTSAVGGSEMAGVSWTYYLRGVGTLN* # PASA_UPDATE: g600.t1, single gene model update, valid-1, status:[pasa:asmbl_6201,status:3], valid-1 NODE_354_length_26229_cov_42.5361 . gene 24046 25560 . - . ID=g600;Name=g600.t1 NODE_354_length_26229_cov_42.5361 . mRNA 24046 25560 . - . ID=g600.t1;Parent=g600;Name=g600.t1 NODE_354_length_26229_cov_42.5361 . five_prime_UTR 25462 25560 . - . ID=g600.t1.utr5p1;Parent=g600.t1 NODE_354_length_26229_cov_42.5361 . exon 24658 25560 . - . ID=g600.t1.exon1;Parent=g600.t1 NODE_354_length_26229_cov_42.5361 . CDS 24658 25461 . - 0 ID=cds.g600.t1;Parent=g600.t1 NODE_354_length_26229_cov_42.5361 . exon 24046 24454 . - . ID=g600.t1.exon2;Parent=g600.t1 NODE_354_length_26229_cov_42.5361 . CDS 24146 24454 . - 0 ID=cds.g600.t1;Parent=g600.t1 NODE_354_length_26229_cov_42.5361 . three_prime_UTR 24046 24145 . - . ID=g600.t1.utr3p1;Parent=g600.t1 #PROT g600.t1 g600 MARIMSGAAIALLVVLLATTAKASSESTMLAAVDVTFTDPSFTSSNLTFVIEFEGIFGTFCPIVAFSGLLVPTDPPAACMPINNAPANNATKWIAVVMRSDRNCTFYTKAMNAYNAGATAVLIVNDDPTRVVIMSAQENVPIPVISVSLNSGVKIISLVSQSGNTATAAVSVGAELSLFHLVYSRLFFDVAVFFIIFCVVTVLVLGVYYIRRRRQIQAYAQRTRRLQDAAKEAVKSLPMRRYVSTQQHVEGSEGETCAICLDEFIVGVDVKVLPCGHEFHAECICPWLLNHWTCPLCKHNILGEQHELIANGVLDPEVALPAYPVSAVRVQVEPDQRSSINATDGSTGVVLVPLPLSATGSIGIPSALDV* # PASA_UPDATE: g597.t1, single gene model update, valid-1, status:[pasa:asmbl_6202,status:3], valid-1 NODE_354_length_26229_cov_42.5361 . gene 17414 19866 . + . ID=g597;Name=g597.t1 NODE_354_length_26229_cov_42.5361 . mRNA 17414 19866 . + . ID=g597.t1;Parent=g597;Name=g597.t1 NODE_354_length_26229_cov_42.5361 . five_prime_UTR 17414 17602 . + . ID=g597.t1.utr5p1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 17414 17673 . + . ID=g597.t1.exon1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 17603 17673 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 17807 17915 . + . ID=g597.t1.exon2;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 17807 17915 . + 1 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 18020 18143 . + . ID=g597.t1.exon3;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 18020 18143 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 18231 18388 . + . ID=g597.t1.exon4;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 18231 18388 . + 2 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 18556 18684 . + . ID=g597.t1.exon5;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 18556 18684 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 18800 18988 . + . ID=g597.t1.exon6;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 18800 18988 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 19148 19345 . + . ID=g597.t1.exon7;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 19148 19345 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . exon 19494 19866 . + . ID=g597.t1.exon8;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . CDS 19494 19664 . + 0 ID=cds.g597.t1;Parent=g597.t1 NODE_354_length_26229_cov_42.5361 . three_prime_UTR 19665 19866 . + . ID=g597.t1.utr3p1;Parent=g597.t1 #PROT g597.t1 g597 MTTSRVVFVVALVAALSTACLAESIALKKVPKLPLHQHRLNLASLAAPSSTSEALQNVQDAFYIGDVSLGTPAQRQATIFDTGSSNFWVTGKDCKSSACKDSSKSIYDHTKSSTYKKDGKAFSIQYGQGSVSGVLAQDSVTIGSLTVSNVTFGEATIESDDSVGFDALLGLGFRSIAVDNVQPVWSVAFDSGLVPEKVFSFYLSHTGDGSSSELLIGGTNSKHYTGDIKWVPLSSESYWQIALDSFTFGSGYKGCSGGCQAIADSGTTLIVGNPSDVDAINKVLGAKQLPDGTFQVDCNKISTFPSLTFNINGNEFPITPQQYTMKGQDESGNTICQSPFEGLDLSGAGINWILGDVFLRAYYSVHDPVNGRIGFAPSATGV* # PASA_UPDATE: g14240.t1, single gene model update, valid-1, status:[pasa:asmbl_6998,status:12], valid-1 NODE_4120_length_2161_cov_42.5412 . gene 125 1844 . - . ID=g14240;Name=g14240.t1 NODE_4120_length_2161_cov_42.5412 . mRNA 125 1844 . - . ID=g14240.t1;Parent=g14240;Name=g14240.t1 NODE_4120_length_2161_cov_42.5412 . exon 1697 1844 . - . ID=g14240.t1.exon1;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . CDS 1697 1844 . - 0 ID=cds.g14240.t1;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . exon 1471 1576 . - . ID=g14240.t1.exon2;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . CDS 1471 1576 . - 2 ID=cds.g14240.t1;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . exon 125 1272 . - . ID=g14240.t1.exon3;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . CDS 378 1272 . - 1 ID=cds.g14240.t1;Parent=g14240.t1 NODE_4120_length_2161_cov_42.5412 . three_prime_UTR 125 377 . - . ID=g14240.t1.utr3p1;Parent=g14240.t1 #PROT g14240.t1 g14240 MLQSKQAVDFFNIMAYYDTYTPFASAITANLASSTIPVNVGIETIDPNSAPDAQSFYQEGWVAMELQLRKAYDAFGTKPYFAGFSIHHYGSYHTLQSGAAASTLPVRILPDSVRPGAAGSAVVRPVPTTSTVPKPVVKSSTVVAAKTTSAPKATSTPVKATSTPAAPKQSSSAVVAKTTSTPVKATSTPTSPKQSSSAVAVPMATSSAAAILSPAASSAAPGACSCRSITVDPFSSVSSTNSFGLPTGDDNTMKSMTMSSGIMQLTAQSANDYWYSTISKGCYSLAPYEWMTFTFAGPAAGAASIALQTAAAGCADAVGTDYTASLAKYSTFDGVQHSVMIPLSDFAAQGASISQIRAIVIKGLGLSGTYSFGLIRFVGCDA* # ORIGINAL: g433.t1 original gene structure, not modified by PASA NODE_2409_length_6390_cov_40.5335 AUGUSTUS gene 240 4396 . - . ID=g433;Name=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS mRNA 240 4396 . - . ID=g433.t1;Parent=g433;Name=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 3947 4396 . - . ID=g433.t1.exon1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 3947 4396 . - 0 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 3648 3811 . - . ID=g433.t1.exon2;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 3648 3811 . - 0 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 2657 3420 . - . ID=g433.t1.exon3;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 2657 3420 . - 1 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 1905 2271 . - . ID=g433.t1.exon4;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 1905 2271 . - 2 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 1622 1748 . - . ID=g433.t1.exon5;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 1622 1748 . - 1 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 1224 1394 . - . ID=g433.t1.exon6;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 1224 1394 . - 0 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 961 1049 . - . ID=g433.t1.exon7;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 961 1049 . - 0 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 689 781 . - . ID=g433.t1.exon8;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 689 781 . - 1 ID=cds.g433.t1;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS exon 240 356 . - . ID=g433.t1.exon9;Parent=g433.t1 NODE_2409_length_6390_cov_40.5335 AUGUSTUS CDS 240 356 . - 1 ID=cds.g433.t1;Parent=g433.t1 #PROT g433.t1 g433 MSAQGPDDDHEEVVAADSVGDYIDDASDVAQVRKVIESEGRGARNLVTWSVPLVDDGGLSAHAPWRKKKRGTTTADASATKQSGPRDTKQQRGSAGGDRKGSESPASSRTGATDSPGGSRGDSVRAWNSREGAEDATLSDGSRLRLTTRKVDVTARYWKYLFDGLHRAVDEIYLACEFEQSEAEAVGVISALDSCRRDFVQLIERFRLHDAFENAEGHARPAALSWETRKMSSIPLGARSPPRRPGRHSVSPSTTNPHSREGSISLDANGMPDGDKTEVLGLGESSSASAIAAAQRQPTSPPKVSASWADRVRHGGNVPAAFLSRATVVSGNRHQQQSSSNARSRDNNSNNDGVDDVDDQQQRTVRPGTGARRPLFGRMKVVGGDGAVAEGSSPVHLPLVLAPDANGSAHNAPDDADLEGLRFALDSDNEDTPLEGSEASFNMALHSDLDSSFLDSSFGDDSSWGDASFNTVIRSPSSASYYSAHSLGSSTGAFHPGGRDHSDRALDGSAPGRLLGDEAWADGSAGPYHPQVDLRAKLTSPLGKKSPSESRMIQEDRMRRAEALKKEILADKARKLGRFADKVRKAHDLHVRRLAERGERLKERCELAVLRRETHLMEKINKAKDEDAKREEIAFITSLEAMNRRKEVEVKHQLEEERLGSLHEQRRARSETKIRREREAMQRRQQLEDERLEKLRAKEERRKEREAEVERTRNVERSQRESMSKQKSRRLAELTMTRLSSSEALVRRLQETGEGAEKRREEALDRKRERAAAVAQGMSS # PASA_UPDATE: g434.t1, single gene model update, valid-1, status:[pasa:asmbl_4240,status:12], valid-1 NODE_2409_length_6390_cov_40.5335 . gene 5475 6319 . + . ID=g434;Name=g434.t1 NODE_2409_length_6390_cov_40.5335 . mRNA 5475 6319 . + . ID=g434.t1;Parent=g434;Name=g434.t1 NODE_2409_length_6390_cov_40.5335 . exon 5475 5546 . + . ID=g434.t1.exon1;Parent=g434.t1 NODE_2409_length_6390_cov_40.5335 . CDS 5475 5546 . + 0 ID=cds.g434.t1;Parent=g434.t1 NODE_2409_length_6390_cov_40.5335 . exon 5713 6319 . + . ID=g434.t1.exon2;Parent=g434.t1 NODE_2409_length_6390_cov_40.5335 . CDS 5713 5931 . + 0 ID=cds.g434.t1;Parent=g434.t1 NODE_2409_length_6390_cov_40.5335 . three_prime_UTR 5932 6319 . + . ID=g434.t1.utr3p1;Parent=g434.t1 #PROT g434.t1 g434 MKPLKVGRRFGRKIMAGMRDIFLQGNLNAVYPIRTVERTEPDAAIISEPVARPREMVKFYYVADEDEDGFDAMDDVVVAGPEVVRNSLTFVSGVNG* # PASA_UPDATE: g4890.t1, single gene model update, valid-1, status:[pasa:asmbl_3891,status:12], valid-1 NODE_2260_length_7018_cov_41.5515 . gene 205 4598 . + . ID=g4890;Name=g4890.t1 NODE_2260_length_7018_cov_41.5515 . mRNA 205 4598 . + . ID=g4890.t1;Parent=g4890;Name=g4890.t1 NODE_2260_length_7018_cov_41.5515 . exon 205 356 . + . ID=g4890.t1.exon1;Parent=g4890.t1 NODE_2260_length_7018_cov_41.5515 . CDS 205 356 . + 0 ID=cds.g4890.t1;Parent=g4890.t1;5_prime_partial=true NODE_2260_length_7018_cov_41.5515 . exon 679 3781 . + . ID=g4890.t1.exon2;Parent=g4890.t1 NODE_2260_length_7018_cov_41.5515 . CDS 679 3781 . + 1 ID=cds.g4890.t1;Parent=g4890.t1 NODE_2260_length_7018_cov_41.5515 . exon 4149 4598 . + . ID=g4890.t1.exon3;Parent=g4890.t1 NODE_2260_length_7018_cov_41.5515 . CDS 4149 4490 . + 0 ID=cds.g4890.t1;Parent=g4890.t1 NODE_2260_length_7018_cov_41.5515 . three_prime_UTR 4491 4598 . + . ID=g4890.t1.utr3p1;Parent=g4890.t1 #PROT g4890.t1 g4890 AQSEERVGIVERQRAELERQVATLRADCERLMQSKTQFHGSTPTPSVPHESSNDGERRSKKAEDDFRRRIYELETAARKTAAEMKELESKIEVLERAALSTRAQSDEITRLKQFELRLQAAEVDRDAARDQILALQRQLLDADSRLADAVRQAAERAAAVETQMAAMREEGSRRLETAHREAEQLRNDAATAHAALQQQIDELETLLSTAKAEAADAARVAAREKAELQSSTRHTDEQLSRALDDARASKAAAQATERELKGRIDAMESSLGDLEEAKSQVEGRLGETERALGDARERIADLQRTLEKERDASIERMRAAEAETARAKSDGDVQRSSVARLQSEVAAVGERFVDAERALAAEKEAREGEARKAAAREGELLSRLQAAEELLHSKDSDATATLHRMSREMDEVRRQAEEAESGLRERISAAEEALRVSRASCDAAGARLLEAQADIARLEAESVRATAEHKKELAAAVEERDALQQQISELHKTIADMKDRAGEQQRAALQERDAGQAKLRRAELELAKARADAEASSVESQQLLDGVRRQLVDAERARREVEANIADITSVAAKTKAELEAKVRSLAALGEQQAADAAAALRRASDETAEVRRTASQREKDLNARVVDLSEQLKSANADIASHNVARLELVAALEKADASAKKKQTELGDALRKASAECDGLRRTVDELQGTLAQQKAVGDEAARVAAAEKADLLASIDRASADAAALREEQRVAVAAYDQRIAAMAAELSSVESALSQERARAKADRAQQEAETDSLRRQVETAAAQLERSVALARDEKDAIVSRASERETSLKTAHSALEASLSVLRGDFEELQRQATEWETSASRTGSELADVRRRAAEESASLREQVTSLETALRDAKAEHARAVTSSSAEIDGLQRRVQRLTDDLARQQTHADAAADDAARDVAALKERLGVVEAQLSAATEDGVRQQRAFAREQETLVGRCAELEQALRAREAASAEAAERAGEELAEERERSAVAVATLESRVAAMAADVESARVDAREAGARLKEKEREFVDRLGMFERDMSDALREQERLKGIIVGLEGALKQSKRDNADLQHKMEDEIKRVKAEADRQLDATIQHLYVAQEQLLAEQSMMSEHKTAQAVAAAAQKPGRSSPVSIMKVIKKMKAEMGAPTTAAGAQALQPSATTSGAAGATLSASHVDLPSVVTQTPKK* # PASA_UPDATE: g4891.t1, single gene model update, valid-1, status:[pasa:asmbl_3892,status:12], valid-1 NODE_2260_length_7018_cov_41.5515 . gene 4905 5714 . - . ID=g4891;Name=g4891.t1 NODE_2260_length_7018_cov_41.5515 . mRNA 4905 5714 . - . ID=g4891.t1;Parent=g4891;Name=g4891.t1 NODE_2260_length_7018_cov_41.5515 . five_prime_UTR 5654 5714 . - . ID=g4891.t1.utr5p1;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . exon 5603 5714 . - . ID=g4891.t1.exon1;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . CDS 5603 5653 . - 0 ID=cds.g4891.t1;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . exon 5176 5365 . - . ID=g4891.t1.exon2;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . CDS 5176 5365 . - 0 ID=cds.g4891.t1;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . exon 4905 4994 . - . ID=g4891.t1.exon3;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . CDS 4924 4994 . - 2 ID=cds.g4891.t1;Parent=g4891.t1 NODE_2260_length_7018_cov_41.5515 . three_prime_UTR 4905 4923 . - . ID=g4891.t1.utr3p1;Parent=g4891.t1 #PROT g4891.t1 g4891 MSEAPKRQITQTDHLNKKLLMSFMNRLPDAPAAVDSTSAEFDDDSSASALPTHIASDQPVEGDAFADDAAMEKLLADAAAADAAEEAQAKLTAALGEARVDEH* # PASA_UPDATE: g12491.t1, single gene model update, valid-1, status:[pasa:asmbl_4467,status:12], valid-1 NODE_250_length_29198_cov_42.0344 . gene 9391 11825 . + . ID=g12491;Name=g12491.t1 NODE_250_length_29198_cov_42.0344 . mRNA 9391 11825 . + . ID=g12491.t1;Parent=g12491;Name=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 9391 9483 . + . ID=g12491.t1.exon1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 9391 9483 . + 0 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 9665 9796 . + . ID=g12491.t1.exon2;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 9665 9796 . + 0 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 10027 10377 . + . ID=g12491.t1.exon3;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 10027 10377 . + 0 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 10573 10703 . + . ID=g12491.t1.exon4;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 10573 10703 . + 0 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 10854 11021 . + . ID=g12491.t1.exon5;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 10854 11021 . + 1 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 11209 11331 . + . ID=g12491.t1.exon6;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 11209 11331 . + 1 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 11501 11596 . + . ID=g12491.t1.exon7;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 11501 11596 . + 1 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . exon 11711 11825 . + . ID=g12491.t1.exon8;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . CDS 11711 11717 . + 1 ID=cds.g12491.t1;Parent=g12491.t1 NODE_250_length_29198_cov_42.0344 . three_prime_UTR 11718 11825 . + . ID=g12491.t1.utr3p1;Parent=g12491.t1 #PROT g12491.t1 g12491 MGILERISEIENEMARTQRNKATSYHLGLLKARLAQLRRELITPKSSGGGKGEGFDVAKTGDARIGFIGFPSVGKSTLLTTLAGVHSEIADYEFTTLTTVPGVIFYKGAKIQTLDLPGIIEGAKDGKGRGRQVIAVARTCSLIYIVLDVLKPLGHKQIIEREVEGFGIRLNKRPPNIVFKKKEKGGINFNSTVSLTHMDQEMAKSILSEYKIHNADVTLRCDATVDEFIDVIEGNRVYIPVVYVLNKIDQISIEELDIIYKIPHCVPISAHHKWNFDDLLEKSWAYLALVRVYTKPKGQLPDYEAPVVLRTGVSTVEEFCNRLHKSLIKEFKYAIVWGTSVKYNPQKVGKDHVLEDEDVVQIVKRI* # PASA_UPDATE: g12495.t1, single gene model update, valid-1, status:[pasa:asmbl_4465,status:12], valid-1 NODE_250_length_29198_cov_42.0344 . gene 25501 28903 . - . ID=g12495;Name=g12495.t1 NODE_250_length_29198_cov_42.0344 . mRNA 25501 28903 . - . ID=g12495.t1;Parent=g12495;Name=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 28760 28903 . - . ID=g12495.t1.exon1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 28760 28903 . - 0 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 28461 28620 . - . ID=g12495.t1.exon2;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 28461 28620 . - 0 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 27666 27754 . - . ID=g12495.t1.exon3;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 27666 27754 . - 2 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 27291 27558 . - . ID=g12495.t1.exon4;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 27291 27558 . - 0 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 26925 27156 . - . ID=g12495.t1.exon5;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 26925 27156 . - 2 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 26516 26739 . - . ID=g12495.t1.exon6;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 26516 26739 . - 1 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . exon 25501 26337 . - . ID=g12495.t1.exon7;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . CDS 25577 26337 . - 2 ID=cds.g12495.t1;Parent=g12495.t1 NODE_250_length_29198_cov_42.0344 . three_prime_UTR 25501 25576 . - . ID=g12495.t1.utr3p1;Parent=g12495.t1 #PROT g12495.t1 g12495 MDARDLNEAIRTPRVGKAVWVRGNRKTQGALQLTLHHIIFTGSGEDLRVLYTNVDIVEKKVLYDIPTLVIRCKDYRVVIFQIPNETECANVNSSLHRLAFPVVDDSVLADAALAREGRYAPSLCYLNARKQGSIVLCGQHVFQQYPKRRPADEAVFHGLLVSTPNNKGYILDARSQSTIASMKKKAMDLESEENYPGFKKYALGLECRTVVRDSLVKLVDVAHNDHKLTTSTWLSKLDSSGWLNHVHGVLASACLAAGLVEREGACVVLHSHEPTDTLLPVATVAQILLDPHYRTVRGFETLIEKDWLRFGHRFSDRHSHFGASGTKFRNSGAMFTLFLDCVWQVLRQYPCSFEFNELFLMAVFDNSYAGSFGTFLLNTERERKAAALETKTESLWSHLNSPNVLNPFLNPLYAYNSRMLQPSCVRQAIFFWSALYDRFEFDWESHHRARNSLRAYKSRSDDLRRKVEGARRTLKTRSGPMALAAWESHMSDGEPATPPTEDAEERVSVDALAAELDGNGDDVEGKPDAAVGDEREAARTAGGRPSSATSGGTWTEASEPLPLDDDGSCDELDESRVAGTTSGGLSRSESGASLGSLGRSSSADQLAELVASVAGTGLSPATPRS* # ORIGINAL: g12490.t1 original gene structure, not modified by PASA NODE_250_length_29198_cov_42.0344 AUGUSTUS gene 2555 7660 . - . ID=g12490;Name=g12490.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS mRNA 2555 7660 . - . ID=g12490.t1;Parent=g12490;Name=g12490.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 2555 7660 . - . ID=g12490.t1.exon1;Parent=g12490.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 2555 7660 . - 0 ID=cds.g12490.t1;Parent=g12490.t1 #PROT g12490.t1 g12490 MAAMRAASHVVFAGAASGWRARGCASAPPHTLLQLSLCPPVMHCWRRGVASPRRFSTKSVSESVVEKDAAPLQPCDGNGPRNIAGSVPLLPASVDSSTVVRWLLFEAPLPISDGVLSAIHERHGIGTVISHCTDALSVGSSPRHVFAGEGRPLSEGRSVGMHPPSDSPPGSAHRDRAVEALQCVLGWVARIFPAPSSARRVEWRKWSGIVRRCDALGLAVPTELRSGTLTALIIDSAYNCDEDESMAAVSNLCTTPADVLALDVSATSPLAYARLSVTLARLGRGDAALVAVRKSFSSVADGHFVKDEAALRAARRAYALLSSLYRERGAARAALSVLEEAHHHGLGLPASAFLSVMLACTQSVRDAEVVRQTTFAVVGAMGRLSVAMDQATFLACMRLFRRTRDADAAMRVYDVAVKDGLRLSPSAYDALLGVLVRTPPPSAVSSAPVARPADTVLRLMIDQGIEPTRSVRVRAVDEALHSGGVRAAALCIGRVSSRTLDVHLVLRVLRALARQQSRGLPDETTHRLLADVVLRALPGPRMFRALIAAHPTAQSILGLCARVDELASLQVRSLRPGRADRLARVAGRALAASDGGSDAVARAIDDALGASRAGDRPSLSMSAAIRATAVLTVNAPDNAASACLLRAVDRGRFAGTRALSPLDYAALGCVMGIAGNATLSSQRIIGPLVALSESKGVPDVRRATSAACARQFVSLFVGYCRDWRLASSVLLSHTVASVLPLVAHPYERLLAVIAAASSADAGASLTGGSLESKHRELAVAASSVLGKMLSAGVLPTTPACAGVVGVLAEGGAPAQDIVDIVSAVSAHSTTETLSHVRLSLAAAFASFGRVDGIDVLLRVSDESQRWQLAASALSVCKAGAECTLLDWFAERRAGWALGSPFVSEAHAQALRLAARVCSLVPSPGSDAAEPPGRMAHRIDGVSFVEWYLAVANLRTLHDDLELLSAGRHLASIVTTVGGVSLLESAVRAIAEAYGDAGAPVPEGLRRAATSAVAARVVCGDISSGTFGWAASLLRATDDDLSVTIAAVGVRHPNVACELVMHCPPGRAISAYALQDIVHHGISMGAPRLDAAVLALAESGREIKSFVWNAALNAAVERLDGAAVERVREAMGGRGMDGDDVTHNILVKHYARSGQTAALEAMLDGKEVSPIAYTEAIAVHASEGEWDQAKRRLDDARRRLGQQLTFEPYAVLASALLDSAGRALNAVSPTAHVAPRVADDRETLRHLRLAAHVLEAGRADGIAVNERYWSLVARCHALLGAPGAAIDGLCGMRAALGHVGWADPAADRQLGSVLSAFAVKRDAAGLMAIVAALRDGRLAESGADDATALSSHLDPADSVQGRPARRRIMRVVGPMAASAIVQCLARADRTRDASVAFEALIEAGHTPDVRAVTALAAGMTVGSEEALRGVLAAAEGAGCVLDGRAYAPLVSLHAKRGAVSAALRVLEEMGRSKISPTPISYSLIVNACGLSGDSMMALRLARVLCELPPDARDGLPTAEFDSHVEHAWASVVRAHCECGDIDGARRAMAEARGRNVRISNAARTFVITCLAHKGDVAGALAELDSVEHPDLPAFNAALRAAGKVGDGHSADALLVRMRMAGVRGDAATYSMVARARSIGGSPEGALGALREAIADGVQPDSRLVAQVERALVLGNRQDLLSEARRLGGSRASVIVKTPTPKS* # PASA_UPDATE: g12489.t1, single gene model update, valid-1, status:[pasa:asmbl_4466,status:12], valid-1 NODE_250_length_29198_cov_42.0344 . gene 548 2440 . - . ID=g12489;Name=g12489.t1 NODE_250_length_29198_cov_42.0344 . mRNA 548 2440 . - . ID=g12489.t1;Parent=g12489;Name=g12489.t1 NODE_250_length_29198_cov_42.0344 . five_prime_UTR 2337 2440 . - . ID=g12489.t1.utr5p1;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . exon 2154 2440 . - . ID=g12489.t1.exon1;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . CDS 2154 2336 . - 0 ID=cds.g12489.t1;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . exon 1829 1999 . - . ID=g12489.t1.exon2;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . CDS 1829 1999 . - 0 ID=cds.g12489.t1;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . exon 548 1692 . - . ID=g12489.t1.exon3;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . CDS 625 1692 . - 0 ID=cds.g12489.t1;Parent=g12489.t1 NODE_250_length_29198_cov_42.0344 . three_prime_UTR 548 624 . - . ID=g12489.t1.utr3p1;Parent=g12489.t1 #PROT g12489.t1 g12489 MATGAMAQRVVLSLENVPVDEDVLYNTPSMADGLDAACETDLRILGCEMIQLAGVLLKVPQVAMATAQVLYQRLFYRRSFVKWDFSDIAMGALFLAAKIEESPRRVRDIVNAFHHVKQRMLGLRPEPIDLVSGLYADSRNNTIKGERNILKELGFCVHVQHPHKLIVNYIRALDLDEHDDLAQMAWNYMNDSLRTNVFMRYSPTTIAAACILLSTRRLKIPLPTSPPWWALVDADLRDMETVARVIQSLYAIPRPCIPDIVRSVNEARAKLGLATQIMMSWVAEPAPTEAPGTPVLAGTAAAATPTRSPLVGSGAPGLGPDGTPLPDAAFSLGTGAGTTPVVAEQQGAVPQGAVPAERCGPLSGSASTAAAGAPEKEKRERDASDRSRDTSGRKDKSDSRDREREKEREKEREREREKERERERERERGRHHRDDRRDDRRDERHRDDRRDRDRDRDRDRERDRGRDRGRSGR* # ORIGINAL: g12494.t1 original gene structure, not modified by PASA NODE_250_length_29198_cov_42.0344 AUGUSTUS gene 21650 24899 . + . ID=g12494;Name=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS mRNA 21650 24899 . + . ID=g12494.t1;Parent=g12494;Name=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 21650 21824 . + . ID=g12494.t1.exon1;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 21650 21824 . + 0 ID=cds.g12494.t1;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 21923 22131 . + . ID=g12494.t1.exon2;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 21923 22131 . + 2 ID=cds.g12494.t1;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 22228 23883 . + . ID=g12494.t1.exon3;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 22228 23883 . + 0 ID=cds.g12494.t1;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 24030 24899 . + . ID=g12494.t1.exon4;Parent=g12494.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 24030 24899 . + 0 ID=cds.g12494.t1;Parent=g12494.t1 #PROT g12494.t1 g12494 MDEDNAVYCVCRGPDDGSFMISCDECEEWFHAKCVGMTKARAKQMEKEGRSYACPMCTVTMDTEGDAQAAASSRPSIAEHTGPAPAAADGTGEGPLVGETARVRKPSAKRMPQSAVIKMEKRSKKNAAKSEGNANSDSAGTAVEPVAGGVCVATGCGKVTQPGREYCSEECVMRAASEALFGSMGGLFDTGDIAEPDATTVASDGKNGSAGTVDVDASASNESVAQPDGAKKEQLQRQMSTDADIAGNPVRSTVFRSLFDAFAARIQHASHEAQKMAPTDGADKPADQEDVSVAGVVVGVGADGETDRTHLQALVEDIEHQLFEAAGRASNERYKSKFRSILFNVKDHRNPLYQEILAGRLPAARLAQMTSEEMAPMELAIWREREKQRSSEVVEDAPARLILKTHKGDVVLEAGDSTMYDAINDSHDIDPVVPPLDEPMQFSSLSVPASDVGASTAHTDLHGMQHERQSLSRRDSAESNSLSLSHSDGSTMHGHTSALVTPERSAQAAKSLSSVTSRRASVTKRQLRASVDSVASESAVGDDALPDILTRVWRGVVVMTNLAEFTVSAHPVVGSGDGLGDQLPSKLTINGRITHDVIDDYLGRLAYSQSKELFVGRLDPESEADATHCAAMHSFFETRVRCAVIGAILPTVIDCYLVPVPAQGPVPRYIRNAANPDSCLGKLLLVVVRVRKNRKASIVAAHPPPDEAEDRPAKRPAHALADSPTGTPQITGASPLGMSPAQPPPPAIGASPAQAHAVQGASGAALAGMSPAPAQDAAALFATAQQQAAQSADNAAAYSAVLAYQRILHSQAQGQAQAQGMSPAQSQPPQPPSQQSGPAYAPAVPSAGPAASAQFQQPHVHPAAHGHTASPMHSYPPAPMGYGPPPVQHHVPQHHMPQPPPFQQAPQHQYAQPPSHQYYGYPPQHHQPQWGPPPPPHAGHMGPPQGHVGPPQGPHGAYHPPANSDYNRR* # ORIGINAL: g12493.t1 original gene structure, not modified by PASA NODE_250_length_29198_cov_42.0344 AUGUSTUS gene 15392 20986 . - . ID=g12493;Name=g12493.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS mRNA 15392 20986 . - . ID=g12493.t1;Parent=g12493;Name=g12493.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 15392 20986 . - . ID=g12493.t1.exon1;Parent=g12493.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 15392 20986 . - 0 ID=cds.g12493.t1;Parent=g12493.t1 #PROT g12493.t1 g12493 MPYGSKYCFACRTWEEWDRIRSERRDAEHAHLASSPPPNTKRTQQCIFPENANADAAVQREDQLEAQRARDARPPSHGSARDYIELRQQVEALQQSHDTVSSTLRAIQTRQHAEDVNGADVERLAGILLEQANALDSVRIQLTGLEELRREISRAGKAMANGGSGCFGGLSASGTVETRRNERPDGDTMARDGGAARCTNGTAPASAADARRLTHQLERCREELKQARMMSKGLQLETERLSGDLSKSNRARVHLEGLLTEARAATDAHRDRKIKAEKRLEAARAEVVGERAAAEESVRCVDALEQRMRSLEADLVVARAAQARAEGERDTAKEERVRAVAECQRAVDERDRLKSERIRVEGDRSAAEAERARMETSSSQASAQVERAKSDAERALAQQRESIARADRASAELKDARLEITALKERLSEAQADADRALSDRAAAMQGKASLLDEMDAAMNEMTGMREAVEQQNAQLRVDLDAARVRLLSLERELGDERDKTARAEIECDTMKERLASIERASSVSEGSAHSRLHDLRTENSLLRRRVDALEKRTVDLEACEVRASELREECVSLKRKAEAGLRFEEELRQRRAEIAQLQSQCVAAEHSQRIAEESVARLTAEVDSLKTARADLTRERNGLRTKVKSLQGTADGLAGLRSDLEAAAEAMRREITERDVRLGDCERARARLEDQRGLLQREAADLERRVESLQMSLEAAGKQRAALEETIATMREALAKLKESHNAAARYDALHEELGASRQRMEEEIARLRRKSDEGAHAVREAEKTRDKLDAVKGKKRALKRALVESKEEASIARATVARLEGAHRQADAELADARSRLARLGHAADEALRFEGQAKRAEEMRHAAEEGRRAAEDAVGRAERATAALRDELELSKTARDSAVNAARRAESELNQLRLELSSTLGELRRCQLALGDAEGKLKNADAERAALRGQLQDAAFSGAALRSQLNEAQTQHVTASAASVASVAERATAAIARAAEESARTQARAAAATVSELRRQQERDALRRERESVQEELRGASPMSPLGVSPDESDIGSPPENVDAQSRRLLRKLKRRLTESQEAIRILSAENERLRVLASDMRSAVSEADREREDRTVLQTLRERISDLDRELAVASEERAHLAGQLRGEKERRRELQRDAAAAIDAAERERAACMQLDAQCAAFAAERADAQHVLSANQAEIGRLHDECARERARGADVERQLLECRQALDTAQAVRGAIEADAQSGASKAARKLERMRDALALKEREVAAAHNEIAAARAREAQLVEDVSAERRAGAARTLESEDSERQLRATADEVVRAAERVRSDVEAELRRAQAEWERERGVLQAAIAEAERQRSRTKDELDAAEGKYALALQRVSEVEREIASARSAVLEKEAQRGEYEARLRRADQLYADLASRVGDADIQRFQAEARAAEAKVRIAENDTVVSALQRTESALRGEVADLRSKLRSAEDACAQLETRLRDSEAHDAAQSTALHAEIVTLRAAVEHSAESVRRTQASFQEARERAEAEWLAEKTRWSGMLDEARRRGAEAVDAARADSEAARASLQITVGRLERALQVERTVAQQHVEKAKLLEATYAEKFALLSRDVAIVKAERAEAVRRLRVEVGGSPSVDVRLDGSNYQSRESALDGLVWAQQHQQYPERRPQDADVLGRRIAAALGEDHSLRNKENAPPPHDAEEGSAGDSVAGERERGSGSASNAEGDVMQRIKATLAGAVGGSRESLLRVGGDESVPHPHPRPQPSRPSQPSHGQAGGVLRGAHPATAVPPSSLDQHVSECVRALSAPGNQLEVRRVGDGLYTVQTGAGVRRFRAVASGGRVLAKVGAGYEPLRDHLAKLAAAR* # ORIGINAL: g12492.t1 original gene structure, not modified by PASA NODE_250_length_29198_cov_42.0344 AUGUSTUS gene 11926 14521 . - . ID=g12492;Name=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS mRNA 11926 14521 . - . ID=g12492.t1;Parent=g12492;Name=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 14468 14521 . - . ID=g12492.t1.exon1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 14468 14521 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 14286 14364 . - . ID=g12492.t1.exon2;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 14286 14364 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 14057 14157 . - . ID=g12492.t1.exon3;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 14057 14157 . - 2 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 13865 13945 . - . ID=g12492.t1.exon4;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 13865 13945 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 13645 13756 . - . ID=g12492.t1.exon5;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 13645 13756 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 13333 13450 . - . ID=g12492.t1.exon6;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 13333 13450 . - 2 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 13069 13249 . - . ID=g12492.t1.exon7;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 13069 13249 . - 1 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 12848 12913 . - . ID=g12492.t1.exon8;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 12848 12913 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 12593 12713 . - . ID=g12492.t1.exon9;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 12593 12713 . - 0 ID=cds.g12492.t1;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS exon 11926 12458 . - . ID=g12492.t1.exon10;Parent=g12492.t1 NODE_250_length_29198_cov_42.0344 AUGUSTUS CDS 11926 12458 . - 2 ID=cds.g12492.t1;Parent=g12492.t1 #PROT g12492.t1 g12492 MLHQKMNDDSLRTRIREQVEFYFGNANLLKDRFMRQRLEADGDHYIDVTVIMKFNRLAALCEDEAVVVAAMRSSAKLEVSADGKRVRRKDALPEHVNVDDRTIYVESLPHGADHDTLRLHFSQFGTVEYVSIPRFKHNRQPKGFAFVEFATADEARAALDSLATLDATPADSSAPTMRAMSKLDWLRLKDTYKRLQRETAQQDKRAQHPQRPQQQPLHSGRIDDVIAEFRHVNGDLSKPDLKSQAIFETYAPVAFVDHRPGQTMGFVRFESAAGAQAACATFDPLSVVEPRSDPDVPIQLRQLHGDEASAYWERVVEYMAARRDKTVRQKAKHATGAVRIATDPQPKTTTTSPPRAPACSGKQKRKKERAAAQSVAHTHPATTPVSAAGEGRTTEGAEGAQGADVAAPPPARIGSGGMSAKSRKTERAKSGAPRVHVRFDNNSDEETSAISHKRPRQDEGDGDDVGESKRLRVEAIAPPLS* # PASA_UPDATE: g833.t1, single gene model update, valid-1, status:[pasa:asmbl_4679,status:3], valid-1 NODE_2626_length_5619_cov_44.1438 . gene 1822 3442 . + . ID=g833;Name=g833.t1 NODE_2626_length_5619_cov_44.1438 . mRNA 1822 3442 . + . ID=g833.t1;Parent=g833;Name=g833.t1 NODE_2626_length_5619_cov_44.1438 . five_prime_UTR 1822 1916 . + . ID=g833.t1.utr5p1;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . exon 1822 2051 . + . ID=g833.t1.exon1;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . CDS 1917 2051 . + 0 ID=cds.g833.t1;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . exon 2492 2579 . + . ID=g833.t1.exon2;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . CDS 2492 2579 . + 0 ID=cds.g833.t1;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . exon 2979 3442 . + . ID=g833.t1.exon3;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . CDS 2979 3121 . + 2 ID=cds.g833.t1;Parent=g833.t1 NODE_2626_length_5619_cov_44.1438 . three_prime_UTR 3122 3442 . + . ID=g833.t1.utr3p1;Parent=g833.t1 #PROT g833.t1 g833 MWTGHQVRVMRLYRNSLKCIRDWAMVRPVYRQEALKLRVAFEENRGVTDFGKTDRIVARGEDMLKYFEHPDPYRYPTAVGGSKYERNIPPPAQVCAMSPQETAWYYGLPEPAPSADAHGHH* # PASA_UPDATE: g832.t1, single gene model update, valid-1, status:[pasa:asmbl_4677,status:12], valid-1 NODE_2626_length_5619_cov_44.1438 . gene 79 1429 . - . ID=g832;Name=g832.t1 NODE_2626_length_5619_cov_44.1438 . mRNA 79 1429 . - . ID=g832.t1;Parent=g832;Name=g832.t1 NODE_2626_length_5619_cov_44.1438 . five_prime_UTR 1376 1429 . - . ID=g832.t1.utr5p1;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . exon 1248 1429 . - . ID=g832.t1.exon1;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . CDS 1248 1375 . - 0 ID=cds.g832.t1;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . exon 971 1040 . - . ID=g832.t1.exon2;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . CDS 971 1040 . - 1 ID=cds.g832.t1;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . exon 538 676 . - . ID=g832.t1.exon3;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . CDS 538 676 . - 0 ID=cds.g832.t1;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . exon 79 170 . - . ID=g832.t1.exon4;Parent=g832.t1 NODE_2626_length_5619_cov_44.1438 . CDS 79 170 . - 2 ID=cds.g832.t1;Parent=g832.t1;3_prime_partial=true #PROT g832.t1 g832 MSAVVSKSVSALSSWADYALDKYVTPLLMPVVERNIVPDFIIRRGIRMSLAGRLNQLKEGGVEKQQARTQQLVEDLRRMPIAIHTADANDQHYEVPAEFFRLVLGQNLKYSSGYWPDGVESIEESEVAALELVCDRATIQDGM # PASA_UPDATE: g834.t1, single gene model update, valid-1, status:[pasa:asmbl_4678,status:3], valid-1 NODE_2626_length_5619_cov_44.1438 . gene 3667 5035 . - . ID=g834;Name=g834.t1 NODE_2626_length_5619_cov_44.1438 . mRNA 3667 5035 . - . ID=g834.t1;Parent=g834;Name=g834.t1 NODE_2626_length_5619_cov_44.1438 . five_prime_UTR 4956 5035 . - . ID=g834.t1.utr5p1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . exon 4826 5035 . - . ID=g834.t1.exon1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . CDS 4826 4955 . - 0 ID=cds.g834.t1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . exon 4606 4707 . - . ID=g834.t1.exon2;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . CDS 4606 4707 . - 2 ID=cds.g834.t1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . exon 4320 4444 . - . ID=g834.t1.exon3;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . CDS 4320 4444 . - 2 ID=cds.g834.t1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . exon 3667 4103 . - . ID=g834.t1.exon4;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . CDS 3675 4103 . - 0 ID=cds.g834.t1;Parent=g834.t1 NODE_2626_length_5619_cov_44.1438 . three_prime_UTR 3667 3674 . - . ID=g834.t1.utr3p1;Parent=g834.t1 #PROT g834.t1 g834 MNFTKGGVEQEYFLGQEDLQRLKETKHDEFEKIQASKDVKVEETVFAREKIDTRPLFEQLQEQKDKKQSEFEEKLMFKNQIYNGLDEDEYSFINSVQQKREIAENERWEEAINEVRAFREQVAKVAEIEPAITPMTTVTSHIILPSKPPSIIAIPGKKSQSELLAGVVRPKRKSTDPTPAHAKGAAVEEANSATSKRQKTEETAASSVGTVGTTQAHVTGADASTTHGAAGSTTVGAAAAGTSGLGLLSALCAYGSDDEDD* # ORIGINAL: g240.t1 original gene structure, not modified by PASA NODE_4300_length_1854_cov_32.5306 AUGUSTUS gene 83 630 . - . ID=g240;Name=g240.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS mRNA 83 630 . - . ID=g240.t1;Parent=g240;Name=g240.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS exon 507 630 . - . ID=g240.t1.exon1;Parent=g240.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS CDS 507 630 . - 0 ID=cds.g240.t1;Parent=g240.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS exon 83 189 . - . ID=g240.t1.exon2;Parent=g240.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS CDS 83 189 . - 2 ID=cds.g240.t1;Parent=g240.t1 #PROT g240.t1 g240 MRVSLFAVFTFAPNEDPNMHIVHYTRTEEQDNSLGMYKQEEGEGAEEVAPNEVGRDEVMMIPTNCSRCHGPAPMLMK # ORIGINAL: g241.t1 original gene structure, not modified by PASA NODE_4300_length_1854_cov_32.5306 AUGUSTUS gene 817 1568 . - . ID=g241;Name=g241.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS mRNA 817 1568 . - . ID=g241.t1;Parent=g241;Name=g241.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS exon 1248 1568 . - . ID=g241.t1.exon1;Parent=g241.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS CDS 1248 1568 . - 0 ID=cds.g241.t1;Parent=g241.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS exon 817 963 . - . ID=g241.t1.exon2;Parent=g241.t1 NODE_4300_length_1854_cov_32.5306 AUGUSTUS CDS 817 963 . - 0 ID=cds.g241.t1;Parent=g241.t1 #PROT g241.t1 g241 MTRLLLTKIPFFKEVILMAFECPHCGFKNNEVQSGGMIQEKGIRVTLKVNGAEDLNRNVVKSDSAAIIIPDLEFEIPSNTQKGKLTTIEGLIERAIAGLDQEQDVRRSLYPESAVQIDGIIARLRSCMVGETPFTFIVDDPAGNSHIMNPYPRCS* # ORIGINAL: g12486.t1 original gene structure, not modified by PASA NODE_1947_length_8397_cov_42.533 AUGUSTUS gene 3840 4628 . - . ID=g12486;Name=g12486.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS mRNA 3840 4628 . - . ID=g12486.t1;Parent=g12486;Name=g12486.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS exon 3840 4628 . - . ID=g12486.t1.exon1;Parent=g12486.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS CDS 3840 4628 . - 0 ID=cds.g12486.t1;Parent=g12486.t1 #PROT g12486.t1 g12486 MSNTSSTGEDDRDRDRDRCFRRRRSEGDRDEPRRLSDPDRRVLSRERDRECDRECDRERDRRSLRLRALVSGDRERDRDLDLSFRERPLFGDTDREGDRRRTFCDARTETLARTLSFTPDALILFVLARTGEAEPRRLDSDFFGDLDLDLDRRGDGDLSFRFLSRDGDGDRDLDLDLDRTRFEPMSDARFSTVAGFFRSREDGVREIGMCGEGGVGGVAIESRPRRLLLGLLLRLRLRLRFRRLPRSETCESTDAASSKSSS* # ORIGINAL: g12487.t1 original gene structure, not modified by PASA NODE_1947_length_8397_cov_42.533 AUGUSTUS gene 4669 7413 . + . ID=g12487;Name=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS mRNA 4669 7413 . + . ID=g12487.t1;Parent=g12487;Name=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS exon 4669 4747 . + . ID=g12487.t1.exon1;Parent=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS CDS 4669 4747 . + 0 ID=cds.g12487.t1;Parent=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS exon 4906 5459 . + . ID=g12487.t1.exon2;Parent=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS CDS 4906 5459 . + 2 ID=cds.g12487.t1;Parent=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS exon 5749 7413 . + . ID=g12487.t1.exon3;Parent=g12487.t1 NODE_1947_length_8397_cov_42.533 AUGUSTUS CDS 5749 7413 . + 0 ID=cds.g12487.t1;Parent=g12487.t1 #PROT g12487.t1 g12487 MRTTDVRRRAPEVVKRLGPKRRESPYDDPRRIAVANAHQSRRIVAASGAHYHQPTEATAGRAKPVLVRKSSATLRKVADQERTTQLENEIAEKEKEIDKLKKEVKALEQVTHRQEKSLNKFVGEDADMPRLLHQHSEELRAAKEAAKKYRERANHFEAKLAKQSKAFQVAKDRLEVLEALANDKRLAEREELAKQLETMKEEAAERDKRVIECERMVSLANKTKEQETKELGSKLRDAQRELEAARGERDSLSNVLKEKDKELDVYNIYSGRKQGKGTKKGPVVDDRSTMTSPEPPTRLPTPPPKPVTVDRANSPKPMPSMVDRSVSPPPRPVTPKPLPRDPTPPPPPRVPTPPPPREPTPPPPPAPEPEPVVAQPPKPKYKFASSIENLHQGKPAYPVPDVEPRKASGAGVSPPIGSVAGAPTSAVDEEARKKRDLLARLNAIDKGVSLEGVKEDAAPKTDLPTTAKGNSDDFPFGQPVLAGKGAANSKPIFLMGEKKPPSVDKLKEEISLEPKLVPALGAPNKESPARGRRGTTEVGGGNDFFSKLKQQKESDTPEKKADADADESYMPTSFGGGRRRTSTKVAGDDGVADSSSPTEAAAPVATGFGARLAAAKGTAKPGDDFMSQLRASKAQGSITGSSSGGGVFGGGPTATAVKKDDDLFGGMKNSPNNGRRRGPGDAVSSGTFVIESNNGRSRASLGAAAGDGIVDDDDDLDGGKGSALRPNIELKKKSFPWEQKAPAAATKGFGRSDFEAAEDVEELAL* # PASA_UPDATE: g12485.t1, single gene model update, valid-1, status:[pasa:asmbl_3080,status:12], valid-1 NODE_1947_length_8397_cov_42.533 . gene 47 1725 . + . ID=g12485;Name=g12485.t1 NODE_1947_length_8397_cov_42.533 . mRNA 47 1725 . + . ID=g12485.t1;Parent=g12485;Name=g12485.t1 NODE_1947_length_8397_cov_42.533 . five_prime_UTR 47 48 . + . ID=g12485.t1.utr5p1;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . exon 47 477 . + . ID=g12485.t1.exon1;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . CDS 49 477 . + 0 ID=cds.g12485.t1;Parent=g12485.t1;5_prime_partial=true NODE_1947_length_8397_cov_42.533 . exon 770 878 . + . ID=g12485.t1.exon2;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . CDS 770 878 . + 0 ID=cds.g12485.t1;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . exon 1389 1725 . + . ID=g12485.t1.exon3;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . CDS 1389 1687 . + 2 ID=cds.g12485.t1;Parent=g12485.t1 NODE_1947_length_8397_cov_42.533 . three_prime_UTR 1688 1725 . + . ID=g12485.t1.utr3p1;Parent=g12485.t1 #PROT g12485.t1 g12485 ERAVHFRHAEKVYYEKALMDATDAAGTFVQNHLSPSSNPSPHPTDLSPDAIAGAKPSVDDGGSLLSLDETHVIRATPRPSTQPSERGPADAADSGVLATDDLDKYMDDEALGPFARRARDLDRLARLCLGEGKPELALEYATQSVTIRQRYLKDETANIQTHVGLLGVAYAESGRKQYTDVLRNYVASRQHEATLGGPATNAIPNASYNADNNQDNHLRINELTEDDVRARFFVLFLAFTVVFAVFLSVFLFSPGVILWLKYQFYYWAQIFRRLFAGR* # ORIGINAL: g5607.t1 original gene structure, not modified by PASA NODE_2770_length_5169_cov_34.1054 AUGUSTUS gene 2234 4876 . + . ID=g5607;Name=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS mRNA 2234 4876 . + . ID=g5607.t1;Parent=g5607;Name=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS exon 2234 2635 . + . ID=g5607.t1.exon1;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS CDS 2234 2635 . + 0 ID=cds.g5607.t1;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS exon 3195 3383 . + . ID=g5607.t1.exon2;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS CDS 3195 3383 . + 0 ID=cds.g5607.t1;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS exon 3674 4120 . + . ID=g5607.t1.exon3;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS CDS 3674 4120 . + 0 ID=cds.g5607.t1;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS exon 4290 4421 . + . ID=g5607.t1.exon4;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS CDS 4290 4421 . + 0 ID=cds.g5607.t1;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS exon 4772 4876 . + . ID=g5607.t1.exon5;Parent=g5607.t1 NODE_2770_length_5169_cov_34.1054 AUGUSTUS CDS 4772 4876 . + 0 ID=cds.g5607.t1;Parent=g5607.t1 #PROT g5607.t1 g5607 MPRRQVDGDTRSSNDKPSIGKDANVGRSAGVEVDAVGEGDGDGGRGGGHSHTHGGARCSGDHGHSSSHAHAHGAVGSGRAFVIAVVLVAAVVGGLYNLPSTGLAGPTSYDVAFTFRKYVVSRVLYDFMNFMIIHEEGWRDSEIAKVIYFPTRSILTTYTELNAPTASSPLTSLSPEEILAEASSVFAQRKASDCYDKGHHTPFVRLDNLQTAFDRAGPITIIIFAGIFGEFIHNYPFEETFVKGLNSSYARLWQERLDAHADEEAKRDRVFSLDAMGYVLRPLSELMRVASVDDTRGRPQIQLIFLKPPMNSLETLGTLDKNAAVCMRRLAKFFAVMPLPANIYIMGYSRGAAVVLHVLARHWQRADEHPWIARVKGAISLGGVLYGAPLADASLDQEHVLNQTIEIIRDLSERISYSKENDVG* # PASA_UPDATE: g5606.t1, single gene model update, valid-1, status:[pasa:asmbl_4974,status:12], valid-1 NODE_2770_length_5169_cov_34.1054 . gene 636 1754 . + . ID=g5606;Name=g5606.t1 NODE_2770_length_5169_cov_34.1054 . mRNA 636 1754 . + . ID=g5606.t1;Parent=g5606;Name=g5606.t1 NODE_2770_length_5169_cov_34.1054 . five_prime_UTR 636 636 . + . ID=g5606.t1.utr5p1;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . exon 636 719 . + . ID=g5606.t1.exon1;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . CDS 637 719 . + 0 ID=cds.g5606.t1;Parent=g5606.t1;5_prime_partial=true NODE_2770_length_5169_cov_34.1054 . exon 942 979 . + . ID=g5606.t1.exon2;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . CDS 942 979 . + 1 ID=cds.g5606.t1;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . exon 1552 1754 . + . ID=g5606.t1.exon3;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . CDS 1552 1595 . + 2 ID=cds.g5606.t1;Parent=g5606.t1 NODE_2770_length_5169_cov_34.1054 . three_prime_UTR 1596 1754 . + . ID=g5606.t1.utr3p1;Parent=g5606.t1 #PROT g5606.t1 g5606 PDDTIGDLKKLVAAQTGTKWEKIVLKKWYTIFKDHITLGDYEIHDGMNLELYYQ* # PASA_UPDATE: g10271.t1, single gene model update, valid-1, status:[pasa:asmbl_2481,status:3], valid-1 NODE_1736_length_9469_cov_46.7387 . gene 7183 8976 . - . ID=g10271;Name=g10271.t1 NODE_1736_length_9469_cov_46.7387 . mRNA 7183 8976 . - . ID=g10271.t1;Parent=g10271;Name=g10271.t1 NODE_1736_length_9469_cov_46.7387 . five_prime_UTR 8897 8976 . - . ID=g10271.t1.utr5p1;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . five_prime_UTR 8508 8768 . - . ID=g10271.t1.utr5p2;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . exon 8897 8976 . - . ID=g10271.t1.exon1;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . exon 7772 8768 . - . ID=g10271.t1.exon2;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . CDS 7772 8507 . - 0 ID=cds.g10271.t1;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . exon 7183 7510 . - . ID=g10271.t1.exon3;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . CDS 7458 7510 . - 2 ID=cds.g10271.t1;Parent=g10271.t1 NODE_1736_length_9469_cov_46.7387 . three_prime_UTR 7183 7457 . - . ID=g10271.t1.utr3p1;Parent=g10271.t1 #PROT g10271.t1 g10271 MGRPRVVSEFPPSYTPASSVIQPPRSGFDYRLEARYKASGSASKSKNAKVILIGNSDVGKTSVLNRFSKNKFDINYKATIGVDFVVEDYQILNTPFSLHVWDTAGQERFKSIARSYFRGAHAIMVVFDLSDPQTLTSTQRWLDDAIRENPRRSLLVFLVGNKRDKVKGASSLPPGQPALPDGLRVAGEMGAEYWEVSASTGENIERLFSRVSALLFEAQVLQEFEHRGSGTMDSAPQIGQRLSAPKASEGGGPPLKETSCCE* # PASA_UPDATE: g10270.t1, single gene model update, valid-1, status:[pasa:asmbl_2479,status:12],[pasa:asmbl_2480,status:12], valid-1 NODE_1736_length_9469_cov_46.7387 . gene 991 6442 . + . ID=g10270;Name=g10270.t1 NODE_1736_length_9469_cov_46.7387 . mRNA 991 6442 . + . ID=g10270.t1;Parent=g10270;Name=g10270.t1 NODE_1736_length_9469_cov_46.7387 . five_prime_UTR 991 1002 . + . ID=g10270.t1.utr5p1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 991 1438 . + . ID=g10270.t1.exon1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 1003 1438 . + 0 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 1731 1800 . + . ID=g10270.t1.exon2;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 1731 1800 . + 2 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 2087 2249 . + . ID=g10270.t1.exon3;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 2087 2249 . + 1 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 2655 2734 . + . ID=g10270.t1.exon4;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 2655 2734 . + 0 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 3110 3503 . + . ID=g10270.t1.exon5;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 3110 3503 . + 1 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 3882 4042 . + . ID=g10270.t1.exon6;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 3882 4042 . + 0 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 4372 4477 . + . ID=g10270.t1.exon7;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 4372 4477 . + 1 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 4728 5502 . + . ID=g10270.t1.exon8;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 4728 5502 . + 0 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 5727 5851 . + . ID=g10270.t1.exon9;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 5727 5851 . + 2 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . exon 6019 6442 . + . ID=g10270.t1.exon10;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . CDS 6019 6273 . + 0 ID=cds.g10270.t1;Parent=g10270.t1 NODE_1736_length_9469_cov_46.7387 . three_prime_UTR 6274 6442 . + . ID=g10270.t1.utr3p1;Parent=g10270.t1 #PROT g10270.t1 g10270 MSQPTADLLSLPTSVGDHALLQAMSNAPPASPNLRFRSPSFPAEVPDLSINSQPTEAASQNKNVAQTATRTSPSTTRAASPASAPVGTNGDGAESTNAVVRGNVPSDTEVRMYRLLTRGHAVSTVGSAVLMGELLKWMDTCACLSAERHSKYPSVTASVDDLQFQEGLLEGHLVQLIGRVNRSFRTSMEVGVTVHVESTTAKAAHVVCEAYFTFVSIDKDGNKVILPELTPQSEEEKNQHMLANERRQIRMGRKNAIERLAKAIKARGQSRALMQAAAHAEAMLVQPAPQISPTSSTVSFASTISAASAPLSASASASGATAAGSSASSGGVSHSAQHRDSGEGGNKTIGPGVISSKTKVISWELVLPPHCNHHGTTFGGQIMEWMCNVATLAASRLSGMFPIVASIDDIHFLESSKVGDRIIITSQVNNSFTTSMEVGVRVEAMTVSGALRHINSAFFTFVAYDAIGKKVHLPELLPQLEEDFRRRDEALARRQVRLDRRKIRSASADLAVPLTRENAMEACYANISNLTILKSTTDWTPVTDTDGIRFMSKETGSSTTCVRVEGNVTAPAQSIFHLLSDLAKRDRWDSLFECGKTLLLLDPANEVLQLSFKPVGPDDKPIDFLLLTSRRAPTEANRPHVIAYRSVVVDGVLTPPGEPPHIGRRSTKGELSCSGFVITPINSHTSHVAYLNQFGPSALSYFAGDIVGSTQLLHNMFARMKSYLEMSISIDAPHVHEAVLNRMLESEEAKLQDLLEKFDSMYQPPPSMEKDILTLRKRVEALREKKVSLGDAGTTAPRVASALPPSMAPTVVPSIVQTLSSGRDSRPQSPATQRKSTLGGLIGRSKSPGPLGRG* # ORIGINAL: g10269.t1 original gene structure, not modified by PASA NODE_1736_length_9469_cov_46.7387 AUGUSTUS gene 122 280 . - . ID=g10269;Name=g10269.t1 NODE_1736_length_9469_cov_46.7387 AUGUSTUS mRNA 122 280 . - . ID=g10269.t1;Parent=g10269;Name=g10269.t1 NODE_1736_length_9469_cov_46.7387 AUGUSTUS exon 122 280 . - . ID=g10269.t1.exon1;Parent=g10269.t1 NODE_1736_length_9469_cov_46.7387 AUGUSTUS CDS 122 280 . - 0 ID=cds.g10269.t1;Parent=g10269.t1 #PROT g10269.t1 g10269 MSSAPAVKEFLKQGFLAATTGGLLYDNHAGTVTNIVHLYTFLLLMFIPYTLYL # ORIGINAL: g5424.t1 original gene structure, not modified by PASA NODE_1303_length_12280_cov_53.2274 AUGUSTUS gene 147 2699 . - . ID=g5424;Name=g5424.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS mRNA 147 2699 . - . ID=g5424.t1;Parent=g5424;Name=g5424.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 147 2699 . - . ID=g5424.t1.exon1;Parent=g5424.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 147 2699 . - 0 ID=cds.g5424.t1;Parent=g5424.t1 #PROT g5424.t1 g5424 MLGLNLCNGAARGISLRKVALPLLAVIVVALIVTCRWAPCFDADSKEGPGPSKDNREVASGSEGKCPPSGTGVGVESFGQIRLTMGVRSMRKSANTEPADDSNQRRSWYNLEESRLKLAIGSNGNAKLPSGLDRDLPLQGQRICFVTARIAGPAAPSDSVAQAVFSHAALYARRGAIVDIAYTGGFGADPSSEWIASLSAANLNLFEVPMGKASDAYGTSHMRRAYDVWQWFQERASSATYHLIVLHDLHGHGLYLLHGKASGLGLMETSIMVVAHSPSKMNDFFHARPPPEGDSGLVHYAMERASIELADCVVSSSEFQFSWMQLSGYRLSDRGAQLYTLSPLLPPAERKTEGREGVVVRSSKFAFVGKLDRASGFLLLLDALDVLVATGDVQAMPTEVLFVGTSTHMRIGGTIVDTKGHVLARRKTGEWPFTVTFNPMDTYESLSAVADMLVRDEYVYINPAIGETSSSITAEMLVGGVAMITADVSGISELFNDRDAHEKWRFERGDVLALSELMRKARVVGVTVNRPKTDQSTTEGLYVAAATAAIYGGAIRESETVASEEAVTVSIGIATRDRATLLAELMKSLSSQTQYGQDTEIVLLDVGSTVAAEVSDIVARYRPVFEKLGVALVFRRLERSVHVSIARNMILKIASGTHLILIDDDDIAAPTMIKDFAKAAQRTHADVVTGFASNFEEAPNGEKVVKRVSLSAGQVEEAMTLVHHAGKSNMMVRRSLAIAVGGCTVDMNAPPTPFVDWDLYVKLFAAGARVAVVPEASFQYRMASVRSIYYNAVGRDDVMFYAHAKRAAGMCAVYGIPPTSCTSFTVLLQLLSRPGSPGIGRLLPRGEEIS* # ORIGINAL: g5425.t1 original gene structure, not modified by PASA NODE_1303_length_12280_cov_53.2274 AUGUSTUS gene 4260 6893 . + . ID=g5425;Name=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS mRNA 4260 6893 . + . ID=g5425.t1;Parent=g5425;Name=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 4260 4326 . + . ID=g5425.t1.exon1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 4260 4326 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 4490 4593 . + . ID=g5425.t1.exon2;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 4490 4593 . + 2 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 4750 4866 . + . ID=g5425.t1.exon3;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 4750 4866 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 5044 5086 . + . ID=g5425.t1.exon4;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 5044 5086 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 5511 5659 . + . ID=g5425.t1.exon5;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 5511 5659 . + 2 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 5871 6037 . + . ID=g5425.t1.exon6;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 5871 6037 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 6149 6204 . + . ID=g5425.t1.exon7;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 6149 6204 . + 1 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 6409 6461 . + . ID=g5425.t1.exon8;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 6409 6461 . + 2 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 6581 6667 . + . ID=g5425.t1.exon9;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 6581 6667 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS exon 6813 6893 . + . ID=g5425.t1.exon10;Parent=g5425.t1 NODE_1303_length_12280_cov_53.2274 AUGUSTUS CDS 6813 6893 . + 0 ID=cds.g5425.t1;Parent=g5425.t1 #PROT g5425.t1 g5425 MGLEKLHPFDSCKWRHVVHHLKDLKVIESIDQLITPLVATRDDLLVCHTQEYLESLEHTGVVAHIAEVPPVAMLPKSVVEKHILEPFRLHAGGTVLGGKLATERGWAVNIGGGFHHCSGRHSNGGGFCVYADITMCIDFLFHRLPDRVSKVLIVDLDAHQGNGHERDFMGDGRVAILDMYNASIYPQDNHAKRAITYKVELRSGTEDDEYMALLRSNLSTALSQSKPSFVVYNAGTDVLKGDPLGQLQITAKGIIERDETVARMCVDASVPFLMVTSGGYQKSTAEIIADSIANMKAKGLLKDGAWD* # PASA_UPDATE: g5427.t1, single gene model update, valid-1, status:[pasa:asmbl_1152,status:12], valid-1 NODE_1303_length_12280_cov_53.2274 . gene 8753 11449 . + . ID=g5427;Name=g5427.t1 NODE_1303_length_12280_cov_53.2274 . mRNA 8753 11449 . + . ID=g5427.t1;Parent=g5427;Name=g5427.t1 NODE_1303_length_12280_cov_53.2274 . five_prime_UTR 8753 8949 . + . ID=g5427.t1.utr5p1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 8753 9052 . + . ID=g5427.t1.exon1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 8950 9052 . + 0 ID=cds.g5427.t1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 9356 9508 . + . ID=g5427.t1.exon2;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 9356 9508 . + 2 ID=cds.g5427.t1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 9712 9884 . + . ID=g5427.t1.exon3;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 9712 9884 . + 2 ID=cds.g5427.t1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 10072 10282 . + . ID=g5427.t1.exon4;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 10072 10282 . + 0 ID=cds.g5427.t1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 10502 10734 . + . ID=g5427.t1.exon5;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 10502 10734 . + 2 ID=cds.g5427.t1;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . exon 11153 11449 . + . ID=g5427.t1.exon6;Parent=g5427.t1 NODE_1303_length_12280_cov_53.2274 . CDS 11153 11449 . + 0 ID=cds.g5427.t1;Parent=g5427.t1 #PROT g5427.t1 g5427 MGHGRLRGALVLLFSVGLLALGGAHGGKVALVIPDGTAQFNLLTVAGCKLAMLDLYGPGFDDNCVVYVVDVLPSVDMSVLRSIAQNATFDHVVLQSFWYESAAHTLALDYTNRTFSIIDVGISSSDPDYRRLRLNLQGVTFAEDQGGYMAGVVAGLVSASKRIAVVGGLPIGPILKFVHGFFGGVNRVCPECLVFRSFSPSFSDDDFGRNATDAFFRSGCDVVFGAAGLTGTAAIRRANDLGMWVIGVDDDNALTVFGENSTQARVLTSAEKRIDAAVRIIVRERLTNTFQGGTKTIDARLGGIVMSPCHGAITCAALRVPMNVFAGADGEDPASNPYSPAASGSCLTVSVTEKSSRQAQLFGRLKNGLETTGVNEDGYISVLSETSGA* # PASA_UPDATE: g5426.t1, single gene model update, valid-1, status:[pasa:asmbl_1151,status:3], valid-1 # PASA_UPDATE: g5426.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1150,status:12], valid-1 NODE_1303_length_12280_cov_53.2274 . gene 7312 8375 . + . ID=g5426;Name=g5426.t1 NODE_1303_length_12280_cov_53.2274 . mRNA 7312 8375 . + . ID=g5426.t1;Parent=g5426;Name=g5426.t1 NODE_1303_length_12280_cov_53.2274 . five_prime_UTR 7312 7352 . + . ID=g5426.t1.utr5p1;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . five_prime_UTR 7493 7525 . + . ID=g5426.t1.utr5p2;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . exon 7312 7352 . + . ID=g5426.t1.exon1;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . exon 7493 7577 . + . ID=g5426.t1.exon2;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . CDS 7526 7577 . + 0 ID=cds.g5426.t1;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . exon 7716 8375 . + . ID=g5426.t1.exon3;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . CDS 7716 8170 . + 2 ID=cds.g5426.t1;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . three_prime_UTR 8171 8375 . + . ID=g5426.t1.utr3p1;Parent=g5426.t1 NODE_1303_length_12280_cov_53.2274 . mRNA 7386 8375 . + . ID=g5426.t1.1.5b6be70a;Parent=g5426;Name=g5426.t1 NODE_1303_length_12280_cov_53.2274 . five_prime_UTR 7386 7525 . + . ID=g5426.t1.1.5b6be70a.utr5p1;Parent=g5426.t1.1.5b6be70a NODE_1303_length_12280_cov_53.2274 . exon 7386 7577 . + . ID=g5426.t1.1.5b6be70a.exon1;Parent=g5426.t1.1.5b6be70a NODE_1303_length_12280_cov_53.2274 . CDS 7526 7577 . + 0 ID=cds.g5426.t1.1.5b6be70a;Parent=g5426.t1.1.5b6be70a NODE_1303_length_12280_cov_53.2274 . exon 7716 8375 . + . ID=g5426.t1.1.5b6be70a.exon2;Parent=g5426.t1.1.5b6be70a NODE_1303_length_12280_cov_53.2274 . CDS 7716 8170 . + 2 ID=cds.g5426.t1.1.5b6be70a;Parent=g5426.t1.1.5b6be70a NODE_1303_length_12280_cov_53.2274 . three_prime_UTR 8171 8375 . + . ID=g5426.t1.1.5b6be70a.utr3p1;Parent=g5426.t1.1.5b6be70a #PROT g5426.t1 g5426 MSAHGDRVRKISHERPEHVHFPDEVSKSIDDDATHDVHGAHHDEPNTVNFGLVSIHHIYSTTYLHPKAGVLVSASTHPELKVANDHSGERHAHATAINIEITTHREGRFAASFQVARLNDITTIHVVATVMGKNKGTPALRPGIHCVGRDPTADSEYESDFKGFHEKP* #PROT g5426.t1.1.5b6be70a g5426 MSAHGDRVRKISHERPEHVHFPDEVSKSIDDDATHDVHGAHHDEPNTVNFGLVSIHHIYSTTYLHPKAGVLVSASTHPELKVANDHSGERHAHATAINIEITTHREGRFAASFQVARLNDITTIHVVATVMGKNKGTPALRPGIHCVGRDPTADSEYESDFKGFHEKP* # ORIGINAL: g398.t1 original gene structure, not modified by PASA NODE_680_length_19144_cov_48.9575 AUGUSTUS gene 3512 8397 . - . ID=g398;Name=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS mRNA 3512 8397 . - . ID=g398.t1;Parent=g398;Name=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 8197 8397 . - . ID=g398.t1.exon1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 8197 8397 . - 0 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 7697 7814 . - . ID=g398.t1.exon2;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 7697 7814 . - 0 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 7305 7602 . - . ID=g398.t1.exon3;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 7305 7602 . - 2 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 5821 7080 . - . ID=g398.t1.exon4;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 5821 7080 . - 1 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 5405 5521 . - . ID=g398.t1.exon5;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 5405 5521 . - 1 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 4989 5100 . - . ID=g398.t1.exon6;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 4989 5100 . - 1 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 4641 4737 . - . ID=g398.t1.exon7;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 4641 4737 . - 0 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 4457 4527 . - . ID=g398.t1.exon8;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 4457 4527 . - 2 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 4113 4236 . - . ID=g398.t1.exon9;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 4113 4236 . - 0 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 3820 3890 . - . ID=g398.t1.exon10;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 3820 3890 . - 2 ID=cds.g398.t1;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 3512 3634 . - . ID=g398.t1.exon11;Parent=g398.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 3512 3634 . - 0 ID=cds.g398.t1;Parent=g398.t1 #PROT g398.t1 g398 MDADQDDAGGPLHQSAVFTTPTPQYLTYDTRSVEVPFAMTELSNLADIFSLGVWKNALDDTDRASLMALLPDVESGAVADKLVAGLFSGENFFFGNPRMDFEKRFKDGHFRSGGNRKRRKARENLIAQNNKEVCIYYKRVCERVSMQRERLIAKMLEPVGEDKGRQLRKTLFDEPSLAPLGARILPSGRLALPKAAPEPLVVEPVRFPPPPSSAKTDEKRCAARVHAILREINRSVEVEMRGGESSAAVAIDGTEEAEASSRVSTLAWAEHFASVDDNNAHIDIEGMLNERRMARFAATTQQKPNVGRHPSAQNDIDVRAHSQMAHNSTGAYPPVLARNGGVQVQVQVPVARRASGSGSTAAAVAPVAPVAPDGDNDEEVPLGVLRTKRNRNAAQSSGEESDGGGVPRKRLAANTDAAEGVHGNAGNTGDDVDVTSPGPDQPGGAPKRRPSKGRGSRPSSKGLAKVNFDDNGYVCFFSVLRDIFRQLPDARALSPKIEGQVQRWQASQSFRQSGRWGAQFEDWSTLTMSALRYLAGDSVFAVQQDGFTPRIEFKERSQHWRWLFAERGEVSGGSAITGISADPDGGDDSDGGGGHVAQRAARRGVTERTATDAELPALCANWLKTRHDEDHGVAPGILPTPRMTTEFVLRCSTNDERREIQLQERERYANPHVPFTFRLHGYESIVGPIKGVYSKDAPPPGKARDHPSLVKDRPVYVTILTLVRDTVARLPNGEGTRADICMLLRDSQYVSGDITDEQISSVVSGALDRLHYEKDPCVRYDSDRKLWVYMHRNRSPDDFVRIHNATAIAAMARKTIQQNKDKQNNGRRQSLLRSQLPVPPRFPVSVADEDASVSDGSASSASE* # ORIGINAL: g400.t1 original gene structure, not modified by PASA NODE_680_length_19144_cov_48.9575 AUGUSTUS gene 14752 17386 . - . ID=g400;Name=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS mRNA 14752 17386 . - . ID=g400.t1;Parent=g400;Name=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 17317 17386 . - . ID=g400.t1.exon1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 17317 17386 . - 0 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 17060 17196 . - . ID=g400.t1.exon2;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 17060 17196 . - 2 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 16450 16520 . - . ID=g400.t1.exon3;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 16450 16520 . - 0 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 16151 16265 . - . ID=g400.t1.exon4;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 16151 16265 . - 1 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 15614 15781 . - . ID=g400.t1.exon5;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 15614 15781 . - 0 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 15215 15317 . - . ID=g400.t1.exon6;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 15215 15317 . - 0 ID=cds.g400.t1;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 14752 14858 . - . ID=g400.t1.exon7;Parent=g400.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 14752 14858 . - 2 ID=cds.g400.t1;Parent=g400.t1 #PROT g400.t1 g400 MVLDGRVLLEDHVLVRDLQLADTDEIVLVRSRPPVPIRDRKVDDVTKEQIMERTKHFPKATEPPPPPTEEHVKDLTDMGFSEASARRALRLLNNNFQRAVEWLLEHNSEEDGDSAAVASAPPPPPTQSTETALASLMEMGFAESDSIDALRLTRNNRELACAYLLGEIEIAEQPPQRSPGHGAPQGQGTAPSHGVSASTVLTALQHSPVLQAALTNPRVIQAIKAMTENPDLAPSMLQDPEIGPVLIEFLRCMYSQ* # ORIGINAL: g397.t1 original gene structure, not modified by PASA NODE_680_length_19144_cov_48.9575 AUGUSTUS gene 189 2945 . + . ID=g397;Name=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS mRNA 189 2945 . + . ID=g397.t1;Parent=g397;Name=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 189 318 . + . ID=g397.t1.exon1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 189 318 . + 2 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 535 628 . + . ID=g397.t1.exon2;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 535 628 . + 1 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 890 1088 . + . ID=g397.t1.exon3;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 890 1088 . + 0 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 1451 1583 . + . ID=g397.t1.exon4;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 1451 1583 . + 2 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 1719 1801 . + . ID=g397.t1.exon5;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 1719 1801 . + 1 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 2036 2185 . + . ID=g397.t1.exon6;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 2036 2185 . + 2 ID=cds.g397.t1;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 2539 2945 . + . ID=g397.t1.exon7;Parent=g397.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 2539 2945 . + 2 ID=cds.g397.t1;Parent=g397.t1 #PROT g397.t1 g397 TFSMVYLAELKDHPGQNVALKRVYPSSNPDRILNEVVCLNKLRGQEGIVELLALVVEGDEVVLVLPYFKHDHFKDYFLDLGLCELRAYLRGLFGALYAVHEAGIIHRDVKPSNFLFSRSLRKHMLVDFGLAQNMEKSTDTAALLAAERLQRTNSSHSASSEPPSSKRKSHSNLLGIAGYDSRESRRRAPACRAGTRGFRAPEVLLQCTEQTSAIDVWAAGVIMLSIFSGRYPFFDSPDDGTALGELISIFGSDALKTASSKLGKELLCQPEQPANSLREICRRFRSAPPPLKAKERSKKFRKTTADKNEANEANETNEKSEKSEKKRRKDRKERGASSVKSPPVLPDEAYDLMEQCLRLDPSQRISARDALQHPFLITSDSDDSADEGDQTERGVQA* # PASA_UPDATE: g401.t1, single gene model update, valid-1, status:[pasa:asmbl_8850,status:12], valid-1 NODE_680_length_19144_cov_48.9575 . gene 18172 19144 . + . ID=g401;Name=g401.t1 NODE_680_length_19144_cov_48.9575 . mRNA 18172 19144 . + . ID=g401.t1;Parent=g401;Name=g401.t1 NODE_680_length_19144_cov_48.9575 . five_prime_UTR 18172 18296 . + . ID=g401.t1.utr5p1;Parent=g401.t1 NODE_680_length_19144_cov_48.9575 . exon 18172 18743 . + . ID=g401.t1.exon1;Parent=g401.t1 NODE_680_length_19144_cov_48.9575 . CDS 18297 18743 . + 0 ID=cds.g401.t1;Parent=g401.t1 NODE_680_length_19144_cov_48.9575 . exon 18966 19144 . + . ID=g401.t1.exon2;Parent=g401.t1 NODE_680_length_19144_cov_48.9575 . CDS 18966 19144 . + 0 ID=cds.g401.t1;Parent=g401.t1;3_prime_partial=true #PROT g401.t1 g401 MEFGFNVNKILPRAITRVDGPGMSSAVKALANLPSTRLSEAWQPHEQLRTVIDGMGMASARAQGLKGAVTTAGKLECSKHALYLLKDADANNGNGAVLGLLKIGKKSLFVIDPNNNHKEIAPTCVLDFYVHESRQRTGCGHSLFEAMLEEEHVRASEIAYDRPSRKFLAFLRKHYGLFEFRPQANNFVVFDQFFLESAGEHLPPPPSH # ORIGINAL: g399.t1 original gene structure, not modified by PASA NODE_680_length_19144_cov_48.9575 AUGUSTUS gene 10117 14503 . + . ID=g399;Name=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS mRNA 10117 14503 . + . ID=g399.t1;Parent=g399;Name=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 10117 10213 . + . ID=g399.t1.exon1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 10117 10213 . + 0 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 10764 10861 . + . ID=g399.t1.exon2;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 10764 10861 . + 2 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 11218 11335 . + . ID=g399.t1.exon3;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 11218 11335 . + 0 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 11542 11770 . + . ID=g399.t1.exon4;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 11542 11770 . + 2 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 11885 12036 . + . ID=g399.t1.exon5;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 11885 12036 . + 1 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 12204 12495 . + . ID=g399.t1.exon6;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 12204 12495 . + 2 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 12592 12768 . + . ID=g399.t1.exon7;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 12592 12768 . + 1 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 12909 12967 . + . ID=g399.t1.exon8;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 12909 12967 . + 1 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 13103 13368 . + . ID=g399.t1.exon9;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 13103 13368 . + 2 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 13541 13948 . + . ID=g399.t1.exon10;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 13541 13948 . + 0 ID=cds.g399.t1;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS exon 14177 14503 . + . ID=g399.t1.exon11;Parent=g399.t1 NODE_680_length_19144_cov_48.9575 AUGUSTUS CDS 14177 14503 . + 0 ID=cds.g399.t1;Parent=g399.t1 #PROT g399.t1 g399 MNRHPRRNHRDADNGGGDESEFYGWHLYFPNELVEWFRDTLPSFEEDLRDRPAETLALMGVAAYNVKRHYLEDGIVADDLPKLTVRIVNYEPHTLMRRIKSSYIGRFVSIRGTVVRVSNVKPLVTHMEFSCARCDGKQVVEFVDGKYALPTKCDTPQCKGRTFSACRGSPNTKTIDWQTVRVQEIMADDSRESGRIPRTIDCELVSDLVDACVPGDVIVLCGEVKVAAADEGAGGRNKPGQAMFVLYISGNSVQNPKKATAAQQATGEHSSTEVMMTDDLSMGDLYLIQKIQNEKDLFRLLVNSICPTIYGHELVKAGLALSLFGGVQRYADTRNKVPIRGDPHVLIVGDPGLGKSQMLQALTSLAPRGVYVCGNTATTAGLTVALAREAGSGDYALEAGALVLGDQGICCIDEFDKMTADHQALLEAMEQQSISIAKAGIVCSLPARTSVIAAANPVGGHYNKAKTVAENLKLSSALLSRFDLVFILLDRPDEDMDRLLSEHVMAMHAGNAAGMRAARAQAAKTSSQADLNARREWMADQSLAERLKVTFTPTGEADIDHLPPHAMRKYVGYARSYVHPRLDEDAAEELRSFYLTLRRDHQSQDATPITTRQLESLVRLAEARARLELREKVTVQDARDVIEIFRFSLFDTFSDDMGNLDFQRSQNGSGLSRKAIVKRFVSSLTEHSRRSNTTLFSRSDLKEIGSRLGVLVDDDMLETLSQGGYLLSKGGRMYQLQTAG* # ORIGINAL: g8.t1 original gene structure, not modified by PASA NODE_3124_length_4249_cov_40.1294 AUGUSTUS gene 1927 3844 . - . ID=g8;Name=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS mRNA 1927 3844 . - . ID=g8.t1;Parent=g8;Name=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS exon 3566 3844 . - . ID=g8.t1.exon1;Parent=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS CDS 3566 3844 . - 0 ID=cds.g8.t1;Parent=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS exon 3010 3157 . - . ID=g8.t1.exon2;Parent=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS CDS 3010 3157 . - 0 ID=cds.g8.t1;Parent=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS exon 1927 2693 . - . ID=g8.t1.exon3;Parent=g8.t1 NODE_3124_length_4249_cov_40.1294 AUGUSTUS CDS 1927 2693 . - 2 ID=cds.g8.t1;Parent=g8.t1 #PROT g8.t1 g8 MPGASSAASDVELRGKNGGPGDKRKKSVYEDANRTAASSIPSRDRAGVRVKGEDASGDMGASGDDDDNPVDGSVACITKGCSANALEESKFCSIHAPLEPNSNYNACAYTNPEGGARCEHAVRKSARTKFCEAHRAHARRVRAAARRRELRNERARQTEPRLDDRDDRDDDIDGRDAGDDGKGDGKDGGEDKGENEDGDDIGASDSNTQGITPPKPRHANRSRQRQSSQVDASDGSDDDDISDTPGSKRRKRRSASSHRGSHPQREYADGGGGGWAHPYDIHSHHYAHVMPPGAAMGYMGTPPGAHMHAVYPPYDHPMAMHPSARYEYEQHRGHGHYERYDQYPPPEHAYAHAPPGQAPPPPSSHVRPPYHRPPFVDPSSVPLPHNATAPQWPPQYP* # PASA_UPDATE: g7.t1, single gene model update, valid-1, status:[pasa:asmbl_5598,status:12], valid-1 NODE_3124_length_4249_cov_40.1294 . gene 309 1096 . - . ID=g7;Name=g7.t1 NODE_3124_length_4249_cov_40.1294 . mRNA 309 1096 . - . ID=g7.t1;Parent=g7;Name=g7.t1 NODE_3124_length_4249_cov_40.1294 . five_prime_UTR 958 1096 . - . ID=g7.t1.utr5p1;Parent=g7.t1 NODE_3124_length_4249_cov_40.1294 . exon 698 1096 . - . ID=g7.t1.exon1;Parent=g7.t1 NODE_3124_length_4249_cov_40.1294 . CDS 698 957 . - 0 ID=cds.g7.t1;Parent=g7.t1 NODE_3124_length_4249_cov_40.1294 . exon 309 544 . - . ID=g7.t1.exon2;Parent=g7.t1 NODE_3124_length_4249_cov_40.1294 . CDS 309 544 . - 1 ID=cds.g7.t1;Parent=g7.t1;3_prime_partial=true #PROT g7.t1 g7 MRQCIGHSRSPSWSSAAQLVQLASVALLVHVVAVAGSPVVGGPGGCLFFSDPSQFAVMYDSTSSPEGGVQTITGFPARAVTIEYWIRYVKDVKNPDQIYLVFGYASSNVVSSTGETFSDDNVFQCCSIIDGRQSVMVLPSLSGGKPIVTPRGDEYTIKFDRWYHF # ORIGINAL: g2785.t1 original gene structure, not modified by PASA NODE_7833_length_404_cov_27.2614_potentialcontaminant AUGUSTUS gene 212 291 . + . ID=g2785;Name=g2785.t1 NODE_7833_length_404_cov_27.2614_potentialcontaminant AUGUSTUS mRNA 212 291 . + . ID=g2785.t1;Parent=g2785;Name=g2785.t1 NODE_7833_length_404_cov_27.2614_potentialcontaminant AUGUSTUS exon 212 291 . + . ID=g2785.t1.exon1;Parent=g2785.t1 NODE_7833_length_404_cov_27.2614_potentialcontaminant AUGUSTUS CDS 212 291 . + 2 ID=cds.g2785.t1;Parent=g2785.t1 #PROT g2785.t1 g2785 VARRKLAAVGRLAATRGSSTCDERPG # ORIGINAL: g7670.t1 original gene structure, not modified by PASA NODE_4354_length_1763_cov_37.5083 AUGUSTUS gene 531 1531 . - . ID=g7670;Name=g7670.t1 NODE_4354_length_1763_cov_37.5083 AUGUSTUS mRNA 531 1531 . - . ID=g7670.t1;Parent=g7670;Name=g7670.t1 NODE_4354_length_1763_cov_37.5083 AUGUSTUS exon 1222 1531 . - . ID=g7670.t1.exon1;Parent=g7670.t1 NODE_4354_length_1763_cov_37.5083 AUGUSTUS CDS 1222 1531 . - 0 ID=cds.g7670.t1;Parent=g7670.t1 NODE_4354_length_1763_cov_37.5083 AUGUSTUS exon 531 835 . - . ID=g7670.t1.exon2;Parent=g7670.t1 NODE_4354_length_1763_cov_37.5083 AUGUSTUS CDS 531 835 . - 2 ID=cds.g7670.t1;Parent=g7670.t1 #PROT g7670.t1 g7670 MGLTLHQPHGHGGHGHSHGDAEAPATNGDSHGHGKGENINVRAAFVHVIGDLVQSIGVLIAAIIIWVHPEWKIADPICTFVFSILVLFTTIGILRDSIHVLMEGVPKGIEFPRVKLALETIPGVRRVHDMHIWSLTMGKPAIAVHIETLPSVDGHAILVAAQDLLCDEYGIHHTTIQIETEGEGDFAHCIGGANCNNICSDVTD* # PASA_UPDATE: g13000.t1, single gene model update, valid-1, status:[pasa:asmbl_1674,status:3], valid-1 NODE_1463_length_11137_cov_35.8867 . gene 7988 10895 . - . ID=g13000;Name=g13000.t1 NODE_1463_length_11137_cov_35.8867 . mRNA 7988 10895 . - . ID=g13000.t1;Parent=g13000;Name=g13000.t1 NODE_1463_length_11137_cov_35.8867 . five_prime_UTR 10672 10895 . - . ID=g13000.t1.utr5p1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 10609 10895 . - . ID=g13000.t1.exon1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 10609 10671 . - 0 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 10390 10489 . - . ID=g13000.t1.exon2;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 10390 10489 . - 0 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 10162 10289 . - . ID=g13000.t1.exon3;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 10162 10289 . - 2 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 9842 9952 . - . ID=g13000.t1.exon4;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 9842 9952 . - 0 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 9365 9471 . - . ID=g13000.t1.exon5;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 9365 9471 . - 0 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 8973 9051 . - . ID=g13000.t1.exon6;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 8973 9051 . - 1 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 8661 8749 . - . ID=g13000.t1.exon7;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 8661 8749 . - 0 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . exon 7988 8385 . - . ID=g13000.t1.exon8;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . CDS 8268 8385 . - 1 ID=cds.g13000.t1;Parent=g13000.t1 NODE_1463_length_11137_cov_35.8867 . three_prime_UTR 7988 8267 . - . ID=g13000.t1.utr3p1;Parent=g13000.t1 #PROT g13000.t1 g13000 MVLARLSRPGLFRSQQFQAAIKTSACAYSASSASSPSLERPPALRIMIMGPPGGGKGTISSRIVRDFGVTHLSSGDALRNQILSKTSLGLEADKHMKAGNLVPDDLMINLMLNELARNEGKSWLLDGFPRTVKQAERLNETFPLDIAINLDVPFDEIVERIKHRKVHLPSGRVYHDLFNPPKVTGIDDVTGEALVVRDDDKPESVMRRLQRYADSTQPLVDYYKSKRILYSFAGRESDVIYPQVQRFFTTYLEMHTKGKRDTSI* # PASA_UPDATE: g12999.t1, single gene model update, valid-1, status:[pasa:asmbl_1675,status:12], valid-1 NODE_1463_length_11137_cov_35.8867 . gene 4646 7765 . + . ID=g12999;Name=g12999.t1 NODE_1463_length_11137_cov_35.8867 . mRNA 4646 7765 . + . ID=g12999.t1;Parent=g12999;Name=g12999.t1 NODE_1463_length_11137_cov_35.8867 . five_prime_UTR 4646 4680 . + . ID=g12999.t1.utr5p1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 4646 4853 . + . ID=g12999.t1.exon1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 4681 4853 . + 0 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 5028 5172 . + . ID=g12999.t1.exon2;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 5028 5172 . + 1 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 5327 5410 . + . ID=g12999.t1.exon3;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 5327 5410 . + 0 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 5657 5749 . + . ID=g12999.t1.exon4;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 5657 5749 . + 0 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 6079 6182 . + . ID=g12999.t1.exon5;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 6079 6182 . + 0 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 6509 6767 . + . ID=g12999.t1.exon6;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 6509 6767 . + 1 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . exon 6964 7765 . + . ID=g12999.t1.exon7;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . CDS 6964 7398 . + 0 ID=cds.g12999.t1;Parent=g12999.t1 NODE_1463_length_11137_cov_35.8867 . three_prime_UTR 7399 7765 . + . ID=g12999.t1.utr3p1;Parent=g12999.t1 #PROT g12999.t1 g12999 MAPRVFALVALLAALVCSASAATLYNSNPEVVELTAANFDSLVLRSNDLWLVEFYAPWCGHCQSLAPEWSKAASALKGIIKVGAVNMDEHQSVGSPYNVRGFPTIKFFGANKNSPVDYNQARTADAITSFALQQAQSVVTNRLKGRGGSSSGSGSGSGNQQRQQESKGSTEDVVTLTSRNFEELVVKSNDIWMVEFYAPWCGHCKNLAPQWASAASQLKGKVRLGAVDCTVETDLAQKFSIRGYPTIMSFLPGQKESPEDYSGGRTSSDIVAYALSKTEQFTAPPEIVELTNKDAFDACTKNQICVVAVFPDILDSGAVGRNRYIATLKDIAAKYRNRPFSYVWTAAGVQSDVESKLNIGGSGYPALVAYNNKKGRYASLIGAFSTSSIGSFLDRLMTGKEHTAQIAGAPTVSSVAAWDGKDGVPPSDEL* # ORIGINAL: g12997.t1 original gene structure, not modified by PASA NODE_1463_length_11137_cov_35.8867 AUGUSTUS gene 176 1030 . + . ID=g12997;Name=g12997.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS mRNA 176 1030 . + . ID=g12997.t1;Parent=g12997;Name=g12997.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 176 353 . + . ID=g12997.t1.exon1;Parent=g12997.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 176 353 . + 1 ID=cds.g12997.t1;Parent=g12997.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 638 1030 . + . ID=g12997.t1.exon2;Parent=g12997.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 638 1030 . + 0 ID=cds.g12997.t1;Parent=g12997.t1 #PROT g12997.t1 g12997 WFVFRVWIKSFLRNGLACRGFRRSTGDVPIEDDLESNDRGHSNQHPGYRRRQFIFYVFKIVSLASGLLFYIVIVTVLRYGINSDDYPFTSDSDAPVIGGFERNKPMSFEAYRNSLIYASSYFFFVIANLFLGVWIIRRYYAPLFEDMKLFFSGILTNERYYSFVAAIMTGNSLMVVCIFQQQMRIWFYK* # ORIGINAL: g12998.t1 original gene structure, not modified by PASA NODE_1463_length_11137_cov_35.8867 AUGUSTUS gene 1858 3669 . + . ID=g12998;Name=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS mRNA 1858 3669 . + . ID=g12998.t1;Parent=g12998;Name=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 1858 2234 . + . ID=g12998.t1.exon1;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 1858 2234 . + 0 ID=cds.g12998.t1;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 2466 2598 . + . ID=g12998.t1.exon2;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 2466 2598 . + 1 ID=cds.g12998.t1;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 2827 3274 . + . ID=g12998.t1.exon3;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 2827 3274 . + 0 ID=cds.g12998.t1;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS exon 3494 3669 . + . ID=g12998.t1.exon4;Parent=g12998.t1 NODE_1463_length_11137_cov_35.8867 AUGUSTUS CDS 3494 3669 . + 2 ID=cds.g12998.t1;Parent=g12998.t1 #PROT g12998.t1 g12998 MDAPPQRAGSIFAQTEILDAIEQTEETKCAVDSDGTLFKWDGSMHVLIPVAIALAPREMPHPARNRPTANILSIALFSYIGVLLRVGLTEIAKYGVAGSFPALFPEVVGTATMGFVVASRGVIDGRHHPLYVGLTTGLCGSITTFSAWNQEASELLVGAGPTSPRGAAYRVIGYISILVLGLGMPAVSLTFGSHVAYLWPLSDVRRAEAQLRADLAAKTAEQSGRSAEGEPVPVEPTNATRSETTTNIDAIADATANATAENTAADDEAAVSNSDKYSISGTEDVAIAVAFVAATGAVIGSTCATHRYDLMFDCAFAPSGALLRYWLSRFNAHSMTFPIGTFVANIVGSVLLAVFVVVPMATNCFSGSSTWAWTAVH* # ORIGINAL: g12119.t1 original gene structure, not modified by PASA NODE_2271_length_6960_cov_38.5253 AUGUSTUS gene 1400 3244 . + . ID=g12119;Name=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS mRNA 1400 3244 . + . ID=g12119.t1;Parent=g12119;Name=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 1400 1488 . + . ID=g12119.t1.exon1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 1400 1488 . + 0 ID=cds.g12119.t1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 1628 1729 . + . ID=g12119.t1.exon2;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 1628 1729 . + 1 ID=cds.g12119.t1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 1949 2018 . + . ID=g12119.t1.exon3;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 1949 2018 . + 1 ID=cds.g12119.t1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 2549 2620 . + . ID=g12119.t1.exon4;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 2549 2620 . + 0 ID=cds.g12119.t1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 2817 3039 . + . ID=g12119.t1.exon5;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 2817 3039 . + 0 ID=cds.g12119.t1;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS exon 3177 3244 . + . ID=g12119.t1.exon6;Parent=g12119.t1 NODE_2271_length_6960_cov_38.5253 AUGUSTUS CDS 3177 3244 . + 2 ID=cds.g12119.t1;Parent=g12119.t1 #PROT g12119.t1 g12119 MLDSDLGANKLASFDSSVIFARARVKLEYLVLSNNPIGGHFNQSDIFAEDLPAAAFSNMVISQLVMVATGIQRIRKAFWGANIQHLWRAAKENVKMREQKEKEAQRARERQLKEEQQRQRSQKRKPIADMNADGDQKGVMDDLIASLRSGQAFTRERPNRERRARKGAVVVAVVVVVVIVCGHSIGTDSVHEGTSGAADMLNKIAAI* # PASA_UPDATE: g12120.t1, single gene model update, valid-1, status:[pasa:asmbl_3909,status:3], valid-1 NODE_2271_length_6960_cov_38.5253 . gene 4156 6845 . - . ID=g12120;Name=g12120.t1 NODE_2271_length_6960_cov_38.5253 . mRNA 4156 6845 . - . ID=g12120.t1;Parent=g12120;Name=g12120.t1 NODE_2271_length_6960_cov_38.5253 . five_prime_UTR 6696 6845 . - . ID=g12120.t1.utr5p1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . exon 6287 6845 . - . ID=g12120.t1.exon1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . CDS 6287 6695 . - 0 ID=cds.g12120.t1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . exon 5476 5921 . - . ID=g12120.t1.exon2;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . CDS 5476 5921 . - 2 ID=cds.g12120.t1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . exon 4749 5154 . - . ID=g12120.t1.exon3;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . CDS 4749 5154 . - 0 ID=cds.g12120.t1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . exon 4156 4533 . - . ID=g12120.t1.exon4;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . CDS 4310 4533 . - 2 ID=cds.g12120.t1;Parent=g12120.t1 NODE_2271_length_6960_cov_38.5253 . three_prime_UTR 4156 4309 . - . ID=g12120.t1.utr3p1;Parent=g12120.t1 #PROT g12120.t1 g12120 MGSISAFVSNADNRKRILLVTWSMVMMAACGTIYAYNAFADELKKRMDYSQSQAELIVSIGNIGICIGAPAGMFMDRYGPRRTAAVGAVLSFLGYFLMYAAVRHMIHVPFGVVCLFYFIVGQGSIFTYMPALMSVVASFDTENRGKVVGLVDAMFGASAAIFSSIYTTTFEKSDDNQDLPGFLLLLALLSFGVDVVAALTMQVIPFDRKRIASAVNNNSGTDSSADGLVSARESDPLLGSGKGRDDVRFVDPDHVTIAEVEAALHPMALPVDITGFQILANIDFQLMFWMFTLAGGAGLMFMDNITFMLTAFDLSSHKTLFVTIIPVASSVARFSSGVLSDHILARVPRSRVLLSMLVLLSVTQVLLVFWMDRLAVLLIGAIAVGASYGTLWCITPTMVAESFGLKHFGQNWGWLMLSSAVGALGYQYMLAAVYDEHKDSGEKDCYGFNCYFVTMIVSAATCALATAMNCLLDYREVRRRRLAVDSKPHVYGEL* # ORIGINAL: g11482.t1 original gene structure, not modified by PASA NODE_1113_length_13847_cov_39.8951 AUGUSTUS gene 3055 8971 . - . ID=g11482;Name=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS mRNA 3055 8971 . - . ID=g11482.t1;Parent=g11482;Name=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 6548 8971 . - . ID=g11482.t1.exon1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 6548 8971 . - 0 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 6000 6341 . - . ID=g11482.t1.exon2;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 6000 6341 . - 0 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 5337 5686 . - . ID=g11482.t1.exon3;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 5337 5686 . - 0 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 4511 5093 . - . ID=g11482.t1.exon4;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 4511 5093 . - 1 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 4096 4237 . - . ID=g11482.t1.exon5;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 4096 4237 . - 0 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 3642 3856 . - . ID=g11482.t1.exon6;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 3642 3856 . - 2 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 3414 3535 . - . ID=g11482.t1.exon7;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 3414 3535 . - 0 ID=cds.g11482.t1;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 3055 3127 . - . ID=g11482.t1.exon8;Parent=g11482.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 3055 3127 . - 1 ID=cds.g11482.t1;Parent=g11482.t1 #PROT g11482.t1 g11482 MGDAGAAPSLVQEIAVLVSRALNLPSNNQMLAKIVIESAGRSSDIAAFETTCKRYAKFPAVALKEIFDRIKNGSASSQKEAEPEAGFGGAQRLEMPTVEKGGLVIMKSDDKHVFKAPAPRSGSILGLDVLARAKRERDAAEKAAGDTDKKAKRQRIAAMHDDDVDADAEGEQQDANDGGKDSTKSETDDPVKTRKDKEERHYRGQRIETPSHPGGVSSDALERIRQMQREKERARGVYISSKDKDDRRGDDRRDDRRDDRRGDRRHNRWDDRGDERRDDARRSDRDRRGDYDRDGRQDAPGDRSERGDRSQRGDRSQRGRQDGDTGRRDAYATPVRTPSAPTPSRSGWADDEFGGAGKKSVGKSSWDSTPARTPSSDTHDVAYASSRRGGPGGARFSAGADAGNGDKSVARGGGDKGGDKAGVGGRRENEDVAREMTEEEQAEWDVEQRRLDRAWYDNDGEGGMATMDEESNPFAGSEEYTQRKEAELRARAVKKGLGPGGAISSRRTLIQKQINRENERWETNRLLTSGVVVQTEADDDVEDDEAERRVHILVQNFTPPFLDGRYVHTKQLDPIVPVRDPTSDLAQNSRKGSQLVRERRELKERIKATRKELRLAGTTLGNIMGVKRTDDDEGDSGAVSGALVGAPLTAAGPAGTMGGKETKDTKASDGNSAQHAKGKGTGAGGDDNTNFKEDSQFAKHMQAKSEAVSDFARSRTITQQRQYLPIFAVRQDLLQVIRDNQVVVIVGETGSGKTTQLTQYLYEEGYCNFGFIGCTQPRRVAAMSVANRVSEEMGVPLGAEVGYSIRFEDCTSEKTVIKYMTDGILLRESLHESDLDKYSVVVMDEAHERSLNTDVLFGILRGVVARRRDLKLIVTSATMDSDKFSAFFGNVPVFTIPGRTFPVDLLFSKLMIEDFVDAAVKQALTIHLQYPPGDILIFMTGQEDIETTCEVLAERLESLGEETPPLSILPIYSQLPADLQAKIFQRTEGDARKCIVATNIAETSLTVDGIIYVIDTGYCKLKVYNPRIGMDALQVFPISRANANQRSGRAGRTGAGSAFRLYTESAYKNEMLINTVPEIQRTNLSNVVLLLKSLGVKNLLEFHFMDAPPEDNILSSLYQLWMLGALDNTGDLTPLGRKMIEFPLDPALSKLVIVGEELGCAEEILTIVSMLSVPTVFYRPKGKEEESDSRREKFQVPESDHLTLLHVYNLWKHSGYSNAWCTDNYVHAKAMKKVREIRQQLHEIMQSNRMRMRSCGSGWDVVRKTICSAFFHQAGRLKGIGEYINMRTGMACHLHPTSALYGMGFTPDYIVYHELVMTTKEYMQCVTAVDPYWLAEMGPMFYSVKESAKTRIERRQQQRIEITKMEEELKQAEEQRRRDKEEEEKRIAAEKKSSRIVTPGRIEPGTPRRTPARFGL* # ORIGINAL: g11481.t1 original gene structure, not modified by PASA NODE_1113_length_13847_cov_39.8951 AUGUSTUS gene 1626 2225 . + . ID=g11481;Name=g11481.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS mRNA 1626 2225 . + . ID=g11481.t1;Parent=g11481;Name=g11481.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 1626 1736 . + . ID=g11481.t1.exon1;Parent=g11481.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 1626 1736 . + 0 ID=cds.g11481.t1;Parent=g11481.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS exon 1944 2225 . + . ID=g11481.t1.exon2;Parent=g11481.t1 NODE_1113_length_13847_cov_39.8951 AUGUSTUS CDS 1944 2225 . + 0 ID=cds.g11481.t1;Parent=g11481.t1 #PROT g11481.t1 g11481 MSWQAYVDTNMVGTGLVSKAAIHGHDGTKWASSPGFNVAPAEVQFIIQNLKASQPDGFFANGIKIQGQKFNFLRHEPNKTAYGRKGADSGVCIVKTNQAVLIGVYEGNIQAGQCNTVVEKLAEYLIENNY* # PASA_UPDATE: g11483.t1, single gene model update, valid-1, status:[pasa:asmbl_433,status:12],[pasa:asmbl_434,status:12], valid-1 NODE_1113_length_13847_cov_39.8951 . gene 10888 13782 . - . ID=g11483;Name=g11483.t1 NODE_1113_length_13847_cov_39.8951 . mRNA 10888 13782 . - . ID=g11483.t1;Parent=g11483;Name=g11483.t1 NODE_1113_length_13847_cov_39.8951 . exon 13745 13782 . - . ID=g11483.t1.exon1;Parent=g11483.t1 NODE_1113_length_13847_cov_39.8951 . CDS 13745 13782 . - 0 ID=cds.g11483.t1;Parent=g11483.t1 NODE_1113_length_13847_cov_39.8951 . exon 10888 13640 . - . ID=g11483.t1.exon2;Parent=g11483.t1 NODE_1113_length_13847_cov_39.8951 . CDS 11117 13640 . - 1 ID=cds.g11483.t1;Parent=g11483.t1 NODE_1113_length_13847_cov_39.8951 . three_prime_UTR 10888 11116 . - . ID=g11483.t1.utr3p1;Parent=g11483.t1 #PROT g11483.t1 g11483 MCVSGSGSGSGSGCQEVIDYTWSLGEDTPLESIHDVGAGGLSNALPEIVHESDRGANFELRRVPCDDPSMSPMEIWCNESQERFVLAVKKDQLGVFEAACARERCPYAVLGDATSEPKLVLSDALLGGNPIDLPMPVLFGKPPKMHRDVVHRASAASGRAWSIGSSSLEECARRVLQLPSVAAKTFLITIGDRTVTGLVARDQMVGRWQVPVADVAVTASTHDSYAGEAMAMGERTPLAVLSHAASARMAVGEAVTNLAAALVASDGSDAHNTLTQVRLSANWMAAAGHPGEDAGLYDAVKAVGMELCPALGIAIPVGKDSMSMRTVWKGDDGASRTVAAPLSLVITAFAPVADVRKTLTPALSDAPEHGGLEGTRLIFVDISGGRARLGGSALLQTHRQTGGDAPDVDEALKLRGFFEAVQHLNKAGLLLAYHDRSDGGLFATVAEMAFASHCGVTVTLDGSFTEHSDAEVLFSEELGAVLQVKAGDVHAVVAQFAASGLSGAQYVSEIGTPFVGDAIRFVRGGRDVLEGSRVAWHRLWAETSYRMQAIRDNPECAQQEYDSLLDAEDPGLHCSLPFDPQSDITSSLVASALRPRVAVLREQGVNGHIEMAAAFERAGFASFDVHMSDILSGRVALSEFSGLVACGGFSYGDVLGAGEGWAKSIRFNPRASSEFGGFFARKDTFTLGICNGCQMLSSLSDLIPGAQSWPRFVRNKSEQFEARFVMAEVPASASIFTRGMAGARIPIAVAHGEGRAEFRGDVSAESFVSGGLVAMRYVNNRGAATERYPFNPNGSPLGIAGATSEDGRVTVLMPHPERSFRAASNSWKPSTWGEDGPWLRLFRNARVWVSEQH* # ORIGINAL: g471.t1 original gene structure, not modified by PASA NODE_1831_length_9005_cov_39.3329 AUGUSTUS gene 134 2729 . + . ID=g471;Name=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS mRNA 134 2729 . + . ID=g471.t1;Parent=g471;Name=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 134 168 . + . ID=g471.t1.exon1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 134 168 . + 0 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 433 515 . + . ID=g471.t1.exon2;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 433 515 . + 1 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 730 821 . + . ID=g471.t1.exon3;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 730 821 . + 2 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 1101 1206 . + . ID=g471.t1.exon4;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 1101 1206 . + 0 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 1462 1572 . + . ID=g471.t1.exon5;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 1462 1572 . + 2 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 1903 2105 . + . ID=g471.t1.exon6;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 1903 2105 . + 2 ID=cds.g471.t1;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 2241 2729 . + . ID=g471.t1.exon7;Parent=g471.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 2241 2729 . + 0 ID=cds.g471.t1;Parent=g471.t1 #PROT g471.t1 g471 MDSEIFASRPDRYNGVIVDISKELVVADADEAKFESVLAASIAHWRHEGRRGIWLRIPPTKSQFIPIALRHGFSFHHAQKTHLMLSAWLPENEPNHLPNYASHYVGVGGFVLNDKNEVLVVCERYSVSNRPHWKLPGGMADPGEELADAAMREVFEETGVRTRFEDIVCFRHMHNYSHGMSDLYFIALLRPTSEEIRMDEREIAKCMWMPNRSISPKLECLLLQLDEYMSSDIVNDLNRSIARCVKEGLASHEGIHACKIPSYDGKTMNLFYTPIRSVADSIAYQHMSTLSVSGNAGGGASEDENKSGDENLNRSGGGGFDRGSRRRSHRLSMQMQAEKIAHIVRAADSVAENGGSAVAPAPMQPASEQSAE* # ORIGINAL: g472.t1 original gene structure, not modified by PASA NODE_1831_length_9005_cov_39.3329 AUGUSTUS gene 3258 4559 . + . ID=g472;Name=g472.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS mRNA 3258 4559 . + . ID=g472.t1;Parent=g472;Name=g472.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 3258 4559 . + . ID=g472.t1.exon1;Parent=g472.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 3258 4559 . + 0 ID=cds.g472.t1;Parent=g472.t1 #PROT g472.t1 g472 MGQLARIFGDSLLKSAKGDIVSIVDALDGRYVGIFFGAAWAGECRQYTSLLAIAYEKAKTDGKPFEIVFVSSDHTSDEFVEYYGHMPWLAVPFGDDKLRSKLSKRYRIDGLPSLIILDSSGNTVSKNAREALAADPNCEKFPWKDPSLSECLGTEFVRGGTLDAVFSAPLSALTTARWIGLYYSAHWCPPCRQFTPFLSNFYKHHAMDLGLEVIFVSADRNERDYQTYVGEMPWLAIPYGDKARSEGLFTRFEVEGIPSLVIVDARTGKTVSTTGVESLADDTAGELFPWRPPTITALGEGVQMSAINTTPFLVAYFPNATKEEIESIHSDVHPIIERARADAEESGDEALLFFTATAADDTLTQRILTVAGVTNTSVPAVFVVDPIQGASYHHSLESGSGGEARVRVHAYDIEAAHKAYRAGGLVERPFALQ* # PASA_UPDATE: g473.t1, single gene model update, valid-1, status:[pasa:asmbl_2753,status:3], valid-1 NODE_1831_length_9005_cov_39.3329 . gene 5191 7487 . - . ID=g473;Name=g473.t1 NODE_1831_length_9005_cov_39.3329 . mRNA 5191 7487 . - . ID=g473.t1;Parent=g473;Name=g473.t1 NODE_1831_length_9005_cov_39.3329 . five_prime_UTR 7417 7487 . - . ID=g473.t1.utr5p1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 7273 7487 . - . ID=g473.t1.exon1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 7273 7416 . - 0 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 6877 7047 . - . ID=g473.t1.exon2;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 6877 7047 . - 0 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 6619 6766 . - . ID=g473.t1.exon3;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 6619 6766 . - 0 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 6355 6412 . - . ID=g473.t1.exon4;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 6355 6412 . - 2 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 6032 6094 . - . ID=g473.t1.exon5;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 6032 6094 . - 1 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 5667 5781 . - . ID=g473.t1.exon6;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 5667 5781 . - 1 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . exon 5191 5310 . - . ID=g473.t1.exon7;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . CDS 5281 5310 . - 0 ID=cds.g473.t1;Parent=g473.t1 NODE_1831_length_9005_cov_39.3329 . three_prime_UTR 5191 5280 . - . ID=g473.t1.utr3p1;Parent=g473.t1 #PROT g473.t1 g473 MSDKLDKPLEDLIAASRKDRSSSGGRRGRGRGALSGRQNNTRSAPYEKPRRDSGNAEGDWHHDRFQGEGNGNGGNRRVADARSSIGSAKILISNLDAGVTDQDIQDIFSSVGTVRKAFVHYDRSGRSVGTAEVTFGNAAGARDAIAKYNNVPLDGKPMQIAVVGGAPAVDARPPRANRPERGTERGTERAERGARPAGGRGGRGGRGERVKRERATPKTAEELDAELDSYRTQASAETEATA* # ORIGINAL: g474.t1 original gene structure, not modified by PASA NODE_1831_length_9005_cov_39.3329 AUGUSTUS gene 7991 8638 . + . ID=g474;Name=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS mRNA 7991 8638 . + . ID=g474.t1;Parent=g474;Name=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 7991 8126 . + . ID=g474.t1.exon1;Parent=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 7991 8126 . + 0 ID=cds.g474.t1;Parent=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 8239 8304 . + . ID=g474.t1.exon2;Parent=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 8239 8304 . + 2 ID=cds.g474.t1;Parent=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS exon 8484 8638 . + . ID=g474.t1.exon3;Parent=g474.t1 NODE_1831_length_9005_cov_39.3329 AUGUSTUS CDS 8484 8638 . + 2 ID=cds.g474.t1;Parent=g474.t1 #PROT g474.t1 g474 MEARFEQLREEVATTGRIIDEFVDSQRKFLEDGQRQHVRVLQEDKENVKRLQNNMNELMTEKAIRAKQSQRQQAEMNALEDEVRGLGRQLTEASERRDAIKSVFDSLAADIEKEKEGG* # ORIGINAL: g4206.t1 original gene structure, not modified by PASA NODE_659_length_19399_cov_41.6931 AUGUSTUS gene 16744 17181 . - . ID=g4206;Name=g4206.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS mRNA 16744 17181 . - . ID=g4206.t1;Parent=g4206;Name=g4206.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 16744 17181 . - . ID=g4206.t1.exon1;Parent=g4206.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 16744 17181 . - 0 ID=cds.g4206.t1;Parent=g4206.t1 #PROT g4206.t1 g4206 MSHGLHGLSQAGTGLSVIQKLPGNNYYGLVWPQHSTENLPPTSLSVDGSTSGSLHPLTPQGTTVGAIDGYLSDPNFPFGDTYTYEIVSTSVEGAFVINTGNPVLLEVGKSLTAYAGQTITLRMRLTDVGCNSIEQDFSYSIRQLT* # ORIGINAL: g4204.t1 original gene structure, not modified by PASA NODE_659_length_19399_cov_41.6931 AUGUSTUS gene 9802 12650 . - . ID=g4204;Name=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS mRNA 9802 12650 . - . ID=g4204.t1;Parent=g4204;Name=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 12564 12650 . - . ID=g4204.t1.exon1;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 12564 12650 . - 0 ID=cds.g4204.t1;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 12260 12434 . - . ID=g4204.t1.exon2;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 12260 12434 . - 0 ID=cds.g4204.t1;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 11932 12066 . - . ID=g4204.t1.exon3;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 11932 12066 . - 2 ID=cds.g4204.t1;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 9802 11678 . - . ID=g4204.t1.exon4;Parent=g4204.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 9802 11678 . - 2 ID=cds.g4204.t1;Parent=g4204.t1 #PROT g4204.t1 g4204 MYVLYGLINPITCARPSRTCIGPWLPSEEAVDLHVFLSHSERLSASVANSNDTAKWSKQSVKLKDFELETPLVVAAPTLRRPKLYAHVAVTKAGSPLFRGANVDPRASVRSVAISKSVPLSSAYMRKNLLSADDKDHRPGNAVHFRPHVDVNIVDDATIYSTENFHAEVAHYYTLYENAYLPVVFMPDASVATDDMVPILPPRARNAGNKSTTDSTANAQTTSTPRINNTAHRTHNNKTASSPGTLLVDGIPLSSDPLQLPTAGVSRETPTAALTPAPPPPGTVRIWLRIRSIGRTRFRIAALYEAVIDVAVAAGLGDEELDAVRGIFDMSNFHYLALTATATVFHIIFEALALRNDVNFWNTRVSMAGLSTGALINSFVCQLIIFLYLMDSPTTSIIIVGSVGAGLLVDGWKVYRALKMRSRARAAREAEARSADAQSAAVAAALTTDPSENPDPSENPSEGPLEKPSENTHAGASSLQNDRTSRSQEGDSRTVHSVPATAAVVSTPAPTASSGPPQQITPARQRVEDLALLTDQIDGEGRQYMSYIVYPLVAAYAVYSLAYHRHAGWYSWLIGSLATGVYFFGFAAMLPQLYVNYRLKSVDHLPWRALFYRAFTTFIDDVFSFAFSMPLAHRIACLRDDVVFIAYLVQRWKYPTDPNRSAWGPPPALVAEANSVRTGTEAAAALATDAQIQSGDVSESPPFSTVAPLQRDMHSSSDGDASEQIDAANDSAAISEHSPGAADSQAGLRRRLVGSDW* # PASA_UPDATE: g4203.t1, single gene model update, valid-1, status:[pasa:asmbl_8729,status:3], valid-1 NODE_659_length_19399_cov_41.6931 . gene 6119 9404 . + . ID=g4203;Name=g4203.t1 NODE_659_length_19399_cov_41.6931 . mRNA 6119 9404 . + . ID=g4203.t1;Parent=g4203;Name=g4203.t1 NODE_659_length_19399_cov_41.6931 . five_prime_UTR 6119 6317 . + . ID=g4203.t1.utr5p1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 6119 6402 . + . ID=g4203.t1.exon1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 6318 6402 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 6610 6686 . + . ID=g4203.t1.exon2;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 6610 6686 . + 2 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 6801 6904 . + . ID=g4203.t1.exon3;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 6801 6904 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 7060 7147 . + . ID=g4203.t1.exon4;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 7060 7147 . + 1 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 7274 7357 . + . ID=g4203.t1.exon5;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 7274 7357 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 7624 7734 . + . ID=g4203.t1.exon6;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 7624 7734 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 7910 8059 . + . ID=g4203.t1.exon7;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 7910 8059 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 8257 8445 . + . ID=g4203.t1.exon8;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 8257 8445 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 8623 8716 . + . ID=g4203.t1.exon9;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 8623 8716 . + 0 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . exon 9062 9404 . + . ID=g4203.t1.exon10;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . CDS 9062 9222 . + 2 ID=cds.g4203.t1;Parent=g4203.t1 NODE_659_length_19399_cov_41.6931 . three_prime_UTR 9223 9404 . + . ID=g4203.t1.utr3p1;Parent=g4203.t1 #PROT g4203.t1 g4203 MFGGFNANRLKVQLKLAINRLKMLQSKKSNQNAGARKQIAQLLEKGKDESARIKVEHIIREDYMIEAMELLELYCDLLLARFGLIEGMKYPDEGIKEALYTVIWVAPRLAADIAEFSSIRDLIISKYGKEFGMDAMENKSNQVSPRITAKFNMHQPDPYLVTQYLIEIAKSHNVDWTPPIEEPTMDAPPPAVDMSAFHPGNFGPGGPGGPGNGGGSNGGGGGGMAVSGKHIEAGFAPMQMPVSHVPPSAAFGRPPPPQQSQQPPQGYAMPPQSNPYLPPQYGQPQEATYESPQVFKQSMPPGGPGVGAPPPLPPRNESTYSDAGAPPGIGGYAAPPVSYTGDVLNLPSVPAGPPTSAGGDDDDDPDFDDLTRRFEALKKR* # ORIGINAL: g4201.t1 original gene structure, not modified by PASA NODE_659_length_19399_cov_41.6931 AUGUSTUS gene 225 913 . - . ID=g4201;Name=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS mRNA 225 913 . - . ID=g4201.t1;Parent=g4201;Name=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 834 913 . - . ID=g4201.t1.exon1;Parent=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 834 913 . - 0 ID=cds.g4201.t1;Parent=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 422 631 . - . ID=g4201.t1.exon2;Parent=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 422 631 . - 1 ID=cds.g4201.t1;Parent=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS exon 225 276 . - . ID=g4201.t1.exon3;Parent=g4201.t1 NODE_659_length_19399_cov_41.6931 AUGUSTUS CDS 225 276 . - 1 ID=cds.g4201.t1;Parent=g4201.t1 #PROT g4201.t1 g4201 MSPLARFVQLFVLGIFALSCGAALTENALPDSNGPIRELFDTDGDVTEIWDDEQSIRDLLDYSSQFGGGLFVMHYAPWCGQSQRIATHFKAAAKVLRAEAVFVGLNCWKVPGCK # PASA_UPDATE: g4202.t1, single gene model update, valid-1, status:[pasa:asmbl_8727,status:12],[pasa:asmbl_8728,status:12], valid-1 NODE_659_length_19399_cov_41.6931 . gene 1297 3793 . + . ID=g4202;Name=g4202.t1 NODE_659_length_19399_cov_41.6931 . mRNA 1297 3793 . + . ID=g4202.t1;Parent=g4202;Name=g4202.t1 NODE_659_length_19399_cov_41.6931 . five_prime_UTR 1297 1442 . + . ID=g4202.t1.utr5p1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 1297 1520 . + . ID=g4202.t1.exon1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 1443 1520 . + 0 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 1739 1845 . + . ID=g4202.t1.exon2;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 1739 1845 . + 0 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 1953 2034 . + . ID=g4202.t1.exon3;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 1953 2034 . + 1 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 2270 2422 . + . ID=g4202.t1.exon4;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 2270 2422 . + 0 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 2528 2828 . + . ID=g4202.t1.exon5;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 2528 2828 . + 0 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 2996 3123 . + . ID=g4202.t1.exon6;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 2996 3123 . + 2 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . exon 3255 3793 . + . ID=g4202.t1.exon7;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . CDS 3255 3497 . + 0 ID=cds.g4202.t1;Parent=g4202.t1 NODE_659_length_19399_cov_41.6931 . three_prime_UTR 3498 3793 . + . ID=g4202.t1.utr3p1;Parent=g4202.t1 #PROT g4202.t1 g4202 MWGRPQPQPVQRQDWSTEAATLRQKQVASLFQFVPNTRELQRDALYEIVNTRADNSVLAVRVTLPQRFPEQAPTLQILPPSRHPWLNELGYVTSHPKIAAWASHNSLGRIVSEVIAEFLSTPAQYQQQQQQQQQQQQQQQGVPGPARQVPPRPPPPGGLAPGSSSPGSTPRQSSGSGASRGIQLPPIPDNFPELESKSRAELERLRDGNSEFETLVAGQPSLQAIKTLEDDMTTENERLALANLSREQALNEARARLSELHARLAEKKAEYERNLARHEEIMQRYSADNLLMKLRGAAAESDRVTDEMAQNVVDGSMSMSHECLLRCAALSVMGCAAVVTGPNAEYPRDFMSTPKQSLYSGRE* # PASA_UPDATE: g4205.t1, single gene model update, valid-1, status:[pasa:asmbl_8730,status:12], valid-1 NODE_659_length_19399_cov_41.6931 . gene 13155 16647 . + . ID=g4205;Name=g4205.t1 NODE_659_length_19399_cov_41.6931 . mRNA 13155 16647 . + . ID=g4205.t1;Parent=g4205;Name=g4205.t1 NODE_659_length_19399_cov_41.6931 . five_prime_UTR 13155 13214 . + . ID=g4205.t1.utr5p1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 13155 13259 . + . ID=g4205.t1.exon1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 13215 13259 . + 0 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 13402 13521 . + . ID=g4205.t1.exon2;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 13402 13521 . + 0 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 13701 13922 . + . ID=g4205.t1.exon3;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 13701 13922 . + 0 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 14133 14166 . + . ID=g4205.t1.exon4;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 14133 14166 . + 0 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 14348 14597 . + . ID=g4205.t1.exon5;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 14348 14597 . + 2 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 14760 15002 . + . ID=g4205.t1.exon6;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 14760 15002 . + 1 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 15251 15374 . + . ID=g4205.t1.exon7;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 15251 15374 . + 1 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 15494 15564 . + . ID=g4205.t1.exon8;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 15494 15564 . + 0 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 15739 15854 . + . ID=g4205.t1.exon9;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 15739 15854 . + 1 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . exon 16048 16647 . + . ID=g4205.t1.exon10;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . CDS 16048 16355 . + 2 ID=cds.g4205.t1;Parent=g4205.t1 NODE_659_length_19399_cov_41.6931 . three_prime_UTR 16356 16647 . + . ID=g4205.t1.utr3p1;Parent=g4205.t1 #PROT g4205.t1 g4205 MTVTLKFTPSANIAKIVDTARQAYNTGRTRSEEYRRTQLLALLRLVDENVEALEKAIWTDLRKSKTEASLYENAIVKNEIYVALENLSAWMKPIKPAVDLLNKLDVNLIQYEPLGVVLIIGAWNYPVQLTLGPLVGAIASGNCVILKPSEVSTASAQLLADLIPKYLDKECFQVINGAVEETTALLRERFDHILYTGGGSVAKVIMRAAAEHLTPVTLELGGKSPTFVDKNADIRCAARRIAWGRFVNAGQTCIAPDYVLCHEAVQDRFVSEIKKAVEEYYGADPQKSPDYGRIVNVNHFHRILRMLTNSKTAKVEIGGTSDEKDRYIAPTVLTNVTMATPVMESEIFGPILPIVTVKSMDEAVKLVNARDKPLALYIFTEDKKVADKILSSTSAGGTCINDTLMHAVVDGLPFGGVGASGQGGYHGRFGFDTFSHKRAVVYKATGVAEALNTLRYPPYSAKKISWLGWLLFKTPTASTGRGGFRWSLLFALAVGVLAVAVASGRIVLPH* # PASA_UPDATE: g9262.t1, single gene model update, valid-1, status:[pasa:asmbl_1987,status:12], valid-1 NODE_1562_length_10470_cov_37.742 . gene 182 625 . - . ID=g9262;Name=g9262.t1 NODE_1562_length_10470_cov_37.742 . mRNA 182 625 . - . ID=g9262.t1;Parent=g9262;Name=g9262.t1 NODE_1562_length_10470_cov_37.742 . five_prime_UTR 496 625 . - . ID=g9262.t1.utr5p1;Parent=g9262.t1 NODE_1562_length_10470_cov_37.742 . exon 389 625 . - . ID=g9262.t1.exon1;Parent=g9262.t1 NODE_1562_length_10470_cov_37.742 . CDS 389 495 . - 0 ID=cds.g9262.t1;Parent=g9262.t1 NODE_1562_length_10470_cov_37.742 . exon 182 244 . - . ID=g9262.t1.exon2;Parent=g9262.t1 NODE_1562_length_10470_cov_37.742 . CDS 182 244 . - 1 ID=cds.g9262.t1;Parent=g9262.t1;3_prime_partial=true #PROT g9262.t1 g9262 MENGTSTTMSESSSPLDELDDDFNTDECGLYLDTLKSRSGSFRHNNSAITDRANRI # PASA_UPDATE: g9263.t1, single gene model update, valid-1, status:[pasa:asmbl_1986,status:12], valid-1 NODE_1562_length_10470_cov_37.742 . gene 1127 9718 . + . ID=g9263;Name=g9263.t1 NODE_1562_length_10470_cov_37.742 . mRNA 1127 9718 . + . ID=g9263.t1;Parent=g9263;Name=g9263.t1 NODE_1562_length_10470_cov_37.742 . five_prime_UTR 1127 1193 . + . ID=g9263.t1.utr5p1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 1127 1490 . + . ID=g9263.t1.exon1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 1194 1490 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 1662 1930 . + . ID=g9263.t1.exon2;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 1662 1930 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 2149 2242 . + . ID=g9263.t1.exon3;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 2149 2242 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 2527 2724 . + . ID=g9263.t1.exon4;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 2527 2724 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 2860 2975 . + . ID=g9263.t1.exon5;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 2860 2975 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 3323 3415 . + . ID=g9263.t1.exon6;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 3323 3415 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 3643 3758 . + . ID=g9263.t1.exon7;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 3643 3758 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 4033 4150 . + . ID=g9263.t1.exon8;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 4033 4150 . + 2 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 4408 4614 . + . ID=g9263.t1.exon9;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 4408 4614 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 4804 4906 . + . ID=g9263.t1.exon10;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 4804 4906 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 5141 5236 . + . ID=g9263.t1.exon11;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 5141 5236 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 5487 5596 . + . ID=g9263.t1.exon12;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 5487 5596 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 5832 5976 . + . ID=g9263.t1.exon13;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 5832 5976 . + 1 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 6281 6391 . + . ID=g9263.t1.exon14;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 6281 6391 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 6706 6826 . + . ID=g9263.t1.exon15;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 6706 6826 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 7049 7140 . + . ID=g9263.t1.exon16;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 7049 7140 . + 2 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 7334 7445 . + . ID=g9263.t1.exon17;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 7334 7445 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 7746 7813 . + . ID=g9263.t1.exon18;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 7746 7813 . + 2 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 8018 8117 . + . ID=g9263.t1.exon19;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 8018 8117 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 8367 8491 . + . ID=g9263.t1.exon20;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 8367 8491 . + 2 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 8669 8779 . + . ID=g9263.t1.exon21;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 8669 8779 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 8998 9034 . + . ID=g9263.t1.exon22;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 8998 9034 . + 0 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . exon 9293 9718 . + . ID=g9263.t1.exon23;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . CDS 9293 9615 . + 2 ID=cds.g9263.t1;Parent=g9263.t1 NODE_1562_length_10470_cov_37.742 . three_prime_UTR 9616 9718 . + . ID=g9263.t1.utr3p1;Parent=g9263.t1 #PROT g9263.t1 g9263 MRIWSSASALFALIFVVLCVCAATSPAPTQVVCPGASKSTLEERILDLGASVTVNHHKAKDPAGSCVRTKMPVETVVDIRKSPNDKRLYRYLKLENELKVILVSDAEADKSAASMDVFVGSGSDPGDFPGLAHFCEHLLFMGTEKYPEENSYSAFLSEHGGNSNAFTSMGHTNYFFDIPCAHLDDVLDRFAQFFIAPLFDENTKDREIKAVDSENEKNIKNDNRRIHQLDRSTSSPDHPYSKFGTGNFETLGSIPSSRGQNVREELLKFYDANYSANRMALAVIGKESLDDLQRMVESRFAAVTNKNLSPVVFPENPYGAQIGTRTEVVPVKDLRFVALRFGFPDTVGNYKSKASRYLSHLFGHEGPGSILSVLKSNGWATSLVAGEEEGVSLRGFTVFGVSVDLTEEGLERVDDVVGVIFGYAALLRSQPPHLWIQEECRLLAEMMFLFKDKEDPYGLSLRLSEALHLYEPAHVLYGPFMFEEFMPELIVDLLARFTPYNARVTVVSKKFEGKTDKKERWYGTDYTMAPLSRELIEAWSTSLPHPDLKLPDVNQFIPTDFSLRHKEGPGHAVPTVIYDSQMVRIFHKQDDTFKLPKALLYISLASPLAYVDPSHNLMATLFVDLLIDSLNEFTYDAELAGLHYSLENAIYGLQLSVMGYNHKLPVLLQKIGERMTSFVIDDKKFAIYKEKMARRFRDFPVEQPYVRGGYYVTETLEECLWTHADKLACINDIIVSSVDEFIPLFLRNVHLDVLAHGNIKPEEAIAAVTLLSGSLVEVMRSKPLLPLQRLRHRAVQLQEGKSYIYNHKDTVHDMSATVNYYQVGVEEIRPNLLLDLVVHMAKEPCFNQLRTKEQLGYIVFTSVYSLNNVQGLRFIVQSDRDAKYLDERIEAFLESFEATLLNMTDVEFANHVTAMIAKLQEKPKTMFEEGARFWTEIRHQRYLFDRRETEIECLRTITKDETILFFKAHVSASSSSRRKLSIHMQSKKNPANDDATPSITPAAAAAADAADGVIRSSHEASKVEVEEITDMAEFKRSVALYRHPTPGPIIRTL* # ORIGINAL: g4058.t1 original gene structure, not modified by PASA NODE_2526_length_6006_cov_38.8521 AUGUSTUS gene 2734 5836 . - . ID=g4058;Name=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS mRNA 2734 5836 . - . ID=g4058.t1;Parent=g4058;Name=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 5711 5836 . - . ID=g4058.t1.exon1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 5711 5836 . - 1 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 5297 5549 . - . ID=g4058.t1.exon2;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 5297 5549 . - 1 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 4809 4871 . - . ID=g4058.t1.exon3;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 4809 4871 . - 0 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 4459 4634 . - . ID=g4058.t1.exon4;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 4459 4634 . - 0 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 4004 4184 . - . ID=g4058.t1.exon5;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 4004 4184 . - 1 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 3713 3863 . - . ID=g4058.t1.exon6;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 3713 3863 . - 0 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 3334 3365 . - . ID=g4058.t1.exon7;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 3334 3365 . - 2 ID=cds.g4058.t1;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 2734 3024 . - . ID=g4058.t1.exon8;Parent=g4058.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 2734 3024 . - 0 ID=cds.g4058.t1;Parent=g4058.t1 #PROT g4058.t1 g4058 WRGTTVAIKTIFTESYDLDQRLEKAGVETAVSSISRMNAGNGYQNATRSMYQSIYVVRDPSCVNTKATDADASSSAPATPTKAKGGGSPTRSKHSGMFAAISDALSALRGGRHVPQPTAKHTAVVKDFLSEIDTMTNLRHPNIVLFMGACVKDPDLCLVQEYCNFGSLMDLYDNDAVNFNWKLRVDFANDCASGMTFLHMNNPPILHLDLKSANLLINDNLTLKASNTSINPLMRVHRLISGSINVYITNHAIAAHLFSLSLFIATVCDFGLSTLKRATQDKGEKEEVRGTLLWVAPEIARQEPGSYTEAADVYSFGIILWELLARQLPYAKDGLINNRDLGRFIVAGLRPSPIPADTPEAWRQLMCACWSDTKDDRPTFPNILARITSMACAGWPEPKIHRFDWDLFGTVPVAAPDSIASRE* # ORIGINAL: g4057.t1 original gene structure, not modified by PASA NODE_2526_length_6006_cov_38.8521 AUGUSTUS gene 62 1957 . + . ID=g4057;Name=g4057.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS mRNA 62 1957 . + . ID=g4057.t1;Parent=g4057;Name=g4057.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 62 142 . + . ID=g4057.t1.exon1;Parent=g4057.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 62 142 . + 0 ID=cds.g4057.t1;Parent=g4057.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS exon 479 1957 . + . ID=g4057.t1.exon2;Parent=g4057.t1 NODE_2526_length_6006_cov_38.8521 AUGUSTUS CDS 479 1957 . + 0 ID=cds.g4057.t1;Parent=g4057.t1 #PROT g4057.t1 g4057 VDSGSPPIMPAPPTTEGWLTDSFPPQLTDPTKGFSFEEESFRMRTWMTTIDPYVVVPYSSPWLQGTTAAMWQQVSSLVEAYLRKKGSGMDDLTITQLGAVVAHEFPKIARRIQSALQACDPLKKPRDQNELELRLAQMRRSSAYACVSTALTRRDLGLDVHVMTPTVDEVNSYKMQTIVLVNLTIALAGTKAAESALGNKLALAGIMELMGACALVRFYSLVPSILRNIQDVFNEYAEWAQTREPTSDRPSCYRVGSRWKGHVPLVLMDLESMAAGHSGCGPVTWEDSHEMFFMGTLRLRLESDFLMQNKTKPYARVVARDPWSGGQSFVEALKAAHGAVFVASSQAASGKHVLPDALCELAAHMMEGVPGVVERNRAAAAKHLIEGWKRGSGVCANVVASGALVSLVSKAETDEARVVAAVMGLQYATSRLALEYMKWRPLMSALFRGHIATNVMTTPPSMRMNHVLRIILQSGGESPTFPRESLSKDNEMRREILQIGVGAPPTRLRIGDDKFGMDT* # PASA_UPDATE: g9805.t1, single gene model update, valid-1, status:[pasa:asmbl_1402,status:12], valid-1 NODE_137_length_35875_cov_40.5099 . gene 1849 8646 . - . ID=g9805;Name=g9805.t1 NODE_137_length_35875_cov_40.5099 . mRNA 1849 8646 . - . ID=g9805.t1;Parent=g9805;Name=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 8563 8646 . - . ID=g9805.t1.exon1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 8563 8646 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 8332 8439 . - . ID=g9805.t1.exon2;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 8332 8439 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 7193 8066 . - . ID=g9805.t1.exon3;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 7193 8066 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 6899 6953 . - . ID=g9805.t1.exon4;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 6899 6953 . - 2 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 6441 6571 . - . ID=g9805.t1.exon5;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 6441 6571 . - 1 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 6040 6164 . - . ID=g9805.t1.exon6;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 6040 6164 . - 2 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 5119 5712 . - . ID=g9805.t1.exon7;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 5119 5712 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 4803 4874 . - . ID=g9805.t1.exon8;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 4803 4874 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 4525 4651 . - . ID=g9805.t1.exon9;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 4525 4651 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 4296 4408 . - . ID=g9805.t1.exon10;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 4296 4408 . - 2 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 3918 4088 . - . ID=g9805.t1.exon11;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 3918 4088 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 3747 3819 . - . ID=g9805.t1.exon12;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 3747 3819 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 3457 3539 . - . ID=g9805.t1.exon13;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 3457 3539 . - 2 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 3114 3281 . - . ID=g9805.t1.exon14;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 3114 3281 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 2188 2348 . - . ID=g9805.t1.exon15;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 2188 2348 . - 0 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . exon 1849 1948 . - . ID=g9805.t1.exon16;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . CDS 1915 1948 . - 1 ID=cds.g9805.t1;Parent=g9805.t1 NODE_137_length_35875_cov_40.5099 . three_prime_UTR 1849 1914 . - . ID=g9805.t1.utr3p1;Parent=g9805.t1 #PROT g9805.t1 g9805 MASEGSLDAAVRAFIDSANAPAQPVSALLESGSANLTALVVALGPCLTHADARQRARGVDLLAEVVRSLSPGRLDPRERSLLSVFLSERLLDSPCIESVVPAIVALTTRHGVAPDDAATLARAIFSEVPVQTFPQGTRNGVFVTLDALVRAHGPHLARSVGADFVFGFVQALDGEKDPRNLMVAFGVARAVASGGFPLDLFAEELFEVTACYFPITFRPPPNDPHGITREGLADALRGALAATDLLAAHVMPLVVEKMAASGAEPKIESLALLAECARSYSPEVLATHHEAVWTALRVEALHGGSVEKEALSTLADIARACDSRLSSGALDALSLFVVPIVEECARHLREPGMKLAQSSANVLGSLASSSLAACTLVYATAIPVVVSVISSAPSSGGAQSAAVDLLVTMLIAGKDAKATAAETHPAALHAASIMPLLLSLLHSDAPAVRRASVAGIIAVEISDSNAVNADAALAELTLLCLDDGDASVRKESLSALCFLATRRPRHVMQAAVPIMLARVRASGADEASQRPMHAVASIARGADMCAAVVPALLEALSDAHTPYALARTSIECLAAIARANAAAPDAVEYLADHVVCPLAMRACALVAAGGETPIMETARLCAEITCAASRESQMRLVSHALDIFVDGKTVPHFAPLSPNANKTHARAIPVFSAIVGVVRTDTPIANVAVIILRACDLATALEGPPAVAAAKCAAALVNKLGVADGDAEAWTSASASLDSIVRILHQGTADEARRAIIPLVWLTKALEMRSHALASSATDALFSALLHPAAGAVAADGFGVVMGDAEDLLNKQTHANIRMLYRQRFFLQHLKRLVSGYTSAADGVKGNFLTALSHLLQNVPKQVLLGELPPLVPLLVRSMSHESAQLRLATVKTFYALVFDAPDVVAAHAATIIPLLLARARDADSMHVRVAALECLGAATSLPSHVILPLKHAVTRGLAAAVDDTKRIVRAEAAKCRSQWFMFDAPVAKR* # ORIGINAL: g9814.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 34750 35342 . + . ID=g9814;Name=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 34750 35342 . + . ID=g9814.t1;Parent=g9814;Name=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 34750 34898 . + . ID=g9814.t1.exon1;Parent=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 34750 34898 . + 0 ID=cds.g9814.t1;Parent=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 35042 35187 . + . ID=g9814.t1.exon2;Parent=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 35042 35187 . + 1 ID=cds.g9814.t1;Parent=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 35326 35342 . + . ID=g9814.t1.exon3;Parent=g9814.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 35326 35342 . + 2 ID=cds.g9814.t1;Parent=g9814.t1 #PROT g9814.t1 g9814 MASITRAVPAIALAGRALSTSASVAAAPAHASQDVSSATAKDTSFYELRWYDVKPAHFRDFLELTKEKIHLRTAVSPLVGYWTCELGGLNQTVHIWKYGTSPT* # ORIGINAL: g9807.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 11282 14772 . - . ID=g9807;Name=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 11282 14772 . - . ID=g9807.t1;Parent=g9807;Name=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 14571 14772 . - . ID=g9807.t1.exon1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 14571 14772 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 14419 14447 . - . ID=g9807.t1.exon2;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 14419 14447 . - 2 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 14161 14307 . - . ID=g9807.t1.exon3;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 14161 14307 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 13913 14027 . - . ID=g9807.t1.exon4;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 13913 14027 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 13709 13812 . - . ID=g9807.t1.exon5;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 13709 13812 . - 2 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 13280 13473 . - . ID=g9807.t1.exon6;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 13280 13473 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 12913 13051 . - . ID=g9807.t1.exon7;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 12913 13051 . - 1 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 12438 12556 . - . ID=g9807.t1.exon8;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 12438 12556 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 12246 12320 . - . ID=g9807.t1.exon9;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 12246 12320 . - 1 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 11879 11987 . - . ID=g9807.t1.exon10;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 11879 11987 . - 1 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 11635 11724 . - . ID=g9807.t1.exon11;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 11635 11724 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 11282 11386 . - . ID=g9807.t1.exon12;Parent=g9807.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 11282 11386 . - 0 ID=cds.g9807.t1;Parent=g9807.t1 #PROT g9807.t1 g9807 MSGKRRSAGEPDHPRAEHVRAELAADDDGMGEFEDPWEDEIEEESDGEEDAEAEEKGEDSAEPMETDDAGAGEAQPEVYLPGQELQPGEVLEHDSSAYHMLHAVNVEWPCLSFDIIRDQLGSGRTKYPHTAYIAAGTQADVAQNNKLMVLKLSQLCKTRQSDDSDEEDDNNEESDDEAEDDPILEYRHVKHPGGVNRLRVCPQQPHIMATWSDSGRVHVWDMAQHIAALDVPPEGKLPSEPIFTFQGHPEEGFAMDWSETVPGRLLTGDCRKHIYLWNRHEGGSWVVDKVPFNGHTQSVEDLQWSPTEQNVFASCSVDKTVRIWDARKKDRSQLSVTAHSSDVNVISWNNIVNYLLVSGGDDGIFKIWDLRMINNENTPAAQFKWHAGPITSVEWNPLEDSVLAVSGADDQVSLWDLSLERDADEQPDDLDVPQQLLFVHQGQHDIKEVHWHPQIPGALFSTAETGFNIFKTISV* # ORIGINAL: g9806.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 9276 11011 . + . ID=g9806;Name=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 9276 11011 . + . ID=g9806.t1;Parent=g9806;Name=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 9276 9716 . + . ID=g9806.t1.exon1;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 9276 9716 . + 0 ID=cds.g9806.t1;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 9888 9992 . + . ID=g9806.t1.exon2;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 9888 9992 . + 0 ID=cds.g9806.t1;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 10354 10488 . + . ID=g9806.t1.exon3;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 10354 10488 . + 0 ID=cds.g9806.t1;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 10796 11011 . + . ID=g9806.t1.exon4;Parent=g9806.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 10796 11011 . + 0 ID=cds.g9806.t1;Parent=g9806.t1 #PROT g9806.t1 g9806 MSSSDGDDAGIGPQLPPSLSGPQRPSPAQPVGPQLPHSASVGPQRPPTASVVPQMPSKGNIGPQMPAELVARLRASAESQHDDADSSEDDCVGPRLPSSGDAGEMSVAEKMAAIERRAEKMRRRLNGEDMDTAPVRETWMLELPPEKNISGLVARTFSTRDNSRGDASAWTDTPADKEKKRKEREERAITGAPPPKVNDAKKRKIELEDAVAASRDQQLRQQLDEYNKDRRGVSLMDMHRKDKAAGAPRTDPGVTPYRPFNRDTEMEGRGVDAKKRRDMIERAKDFGTKFAPGRSSFL* # PASA_UPDATE: g9809.t1, single gene model update, valid-1, status:[pasa:asmbl_1399,status:3], valid-1 NODE_137_length_35875_cov_40.5099 . gene 19607 21358 . + . ID=g9809;Name=g9809.t1 NODE_137_length_35875_cov_40.5099 . mRNA 19607 21358 . + . ID=g9809.t1;Parent=g9809;Name=g9809.t1 NODE_137_length_35875_cov_40.5099 . five_prime_UTR 19607 19623 . + . ID=g9809.t1.utr5p1;Parent=g9809.t1 NODE_137_length_35875_cov_40.5099 . exon 19607 19753 . + . ID=g9809.t1.exon1;Parent=g9809.t1 NODE_137_length_35875_cov_40.5099 . CDS 19624 19753 . + 0 ID=cds.g9809.t1;Parent=g9809.t1 NODE_137_length_35875_cov_40.5099 . exon 19840 21358 . + . ID=g9809.t1.exon2;Parent=g9809.t1 NODE_137_length_35875_cov_40.5099 . CDS 19840 20861 . + 2 ID=cds.g9809.t1;Parent=g9809.t1 NODE_137_length_35875_cov_40.5099 . three_prime_UTR 20862 21358 . + . ID=g9809.t1.utr3p1;Parent=g9809.t1 #PROT g9809.t1 g9809 MSHWRGALVFALTVAVALGVYERWRGQSSQRKRRADKGAPCDAAGNGHSAVVAVASATQSPCGVPLPLVQFDIGQVLAAIPQLTTESASALIRAIDTENGDAAERARALVTIANSAAFGVGNQGALRENGGLEAVMRLLASRSESDLLAALRAFANLAVNEVNQDTLFAALPAVDRLLSAPNTDIVVAACRCLLNMSVRDDFHHVVRRTNAGKTLARLVMRAVDLRKNSPDASALLLVGKDYYVRRPEDAVMYEAMRVVVNLTCNKSSAAWLSRAGVLEACADVAMEWPIRGPGIDAELLQKAAAALSHILAAVAAAACDGGLESGEGEAWDTRAVPGTPLFSRIELAVARLCDCDDADARAFAVRARTSVHALAVTEAQGHK* # PASA_UPDATE: g9804.t1, single gene model update, valid-1, status:[pasa:asmbl_1398,status:3], valid-1 NODE_137_length_35875_cov_40.5099 . gene 186 1816 . + . ID=g9804;Name=g9804.t1 NODE_137_length_35875_cov_40.5099 . mRNA 186 1816 . + . ID=g9804.t1;Parent=g9804;Name=g9804.t1 NODE_137_length_35875_cov_40.5099 . five_prime_UTR 186 260 . + . ID=g9804.t1.utr5p1;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . exon 186 568 . + . ID=g9804.t1.exon1;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . CDS 261 568 . + 0 ID=cds.g9804.t1;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . exon 844 1039 . + . ID=g9804.t1.exon2;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . CDS 844 1039 . + 1 ID=cds.g9804.t1;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . exon 1415 1816 . + . ID=g9804.t1.exon3;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . CDS 1415 1615 . + 0 ID=cds.g9804.t1;Parent=g9804.t1 NODE_137_length_35875_cov_40.5099 . three_prime_UTR 1616 1816 . + . ID=g9804.t1.utr3p1;Parent=g9804.t1 #PROT g9804.t1 g9804 MVPPAGMPGAAGETLAVAVAAAGGVIAVGGGAGDAPVPATARAELPPSLSVTAASASIGRNSIPAIFVPPLNFAMVAPGVYRSGYPNKKNFPFLKRLGLKSLLYLCPEPYAENNVGFLTENGIGLFHFGIFGNKEPFVEIPDRVIRQALAVLLDRRNHPILIHCNKGKHRTGCLVGCLRKVQRWSMTSVFDEYHRFAGTKGRILDQQFIELFDVAAAAVTCSTMHDARQRPSWL* # PASA_UPDATE: g9812.t1, single gene model update, valid-1, status:[pasa:asmbl_1403,status:12],[pasa:asmbl_1405,status:12], valid-1 NODE_137_length_35875_cov_40.5099 . gene 27233 30206 . - . ID=g9812;Name=g9812.t1 NODE_137_length_35875_cov_40.5099 . mRNA 27233 30206 . - . ID=g9812.t1;Parent=g9812;Name=g9812.t1 NODE_137_length_35875_cov_40.5099 . exon 27901 30206 . - . ID=g9812.t1.exon1;Parent=g9812.t1 NODE_137_length_35875_cov_40.5099 . CDS 27901 30206 . - 0 ID=cds.g9812.t1;Parent=g9812.t1 NODE_137_length_35875_cov_40.5099 . exon 27233 27715 . - . ID=g9812.t1.exon2;Parent=g9812.t1 NODE_137_length_35875_cov_40.5099 . CDS 27250 27715 . - 1 ID=cds.g9812.t1;Parent=g9812.t1 NODE_137_length_35875_cov_40.5099 . three_prime_UTR 27233 27249 . - . ID=g9812.t1.utr3p1;Parent=g9812.t1 #PROT g9812.t1 g9812 MALPVRFVVISPTGHADSAARARFAPKVLAALGARAGDGALIPIDSPGDHRDSGSDGVVIAGVRSGVYALCTLWPLRQASGPHALDYCEVDATVVLTNDSGQRNRMQSVGASPGAESVRAVAPRAIERSAITLLPNTPRARSVTVVVSSRRSKAGGVGAPSSDLLSRQLSALLSGKLLCAGAVVAFADGAQDAAWIESIEVVSVCPVRKAREATARQLSTPAHPQCVLATAATCVYVVTRPAKVHPDMSSPPAAQDASSGAPGSSGRGAASRRVAGTGDALDRLLEIVRLPFLHRDAFARMGVECPKGILLSGPPGVGKTLLARAVADECGAELIVVNGPELYGAYIGDSEANLRRVFADASARAAAGSHPVMLFFDEIDALCPKRDAGDRHSARVVAQLLTLMDGIGSKVVAAAGQDSPHPSGSGSRSGGMFGVGGSAAAARDRDVGAGGVWSSADRGGHVAPRGGLIVVGATNRPNAIDAALRRPGRFDREVCMRPPDARDRRDIFAIYTRQMPLAADVDLAELATLSNGCVGADIAEVCRAAAMEALHRAVARGADTAAREKYGDGDGDGEGRGGGERVCAPDTASVGTRESSRAESSRAGAVSGPAGPSSSSSSNNSNKRRSIASVCAADFRVALSHHVPSVLRGSEVRVDPVTWDAIGGCDEAKAALRRAVEWPLLHPGAFSRLGIAPTRGILLYGPPGCSKTTLVRALAGTAGCALLYLSGAQLYSPYVGDSEKEVRDVFVRARASAPCIVFLDEIDAIVGDRNASDGGGSDGVSARVLSALLNEMDGVEAATGVLVVAATNRPRALDAALMRPGRFDAAVLVPAPDAHSRAEIFRIKMQSMPVAEDVDVGEIVRRTEGYTGADIEAVCREAAMAALRRTLDCTRVVWMDFDAALSAVPRSLTPTQLQQYCLNPFGR* # ORIGINAL: g9808.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 15071 17557 . - . ID=g9808;Name=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 15071 17557 . - . ID=g9808.t1;Parent=g9808;Name=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 16826 17557 . - . ID=g9808.t1.exon1;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 16826 17557 . - 0 ID=cds.g9808.t1;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 16316 16630 . - . ID=g9808.t1.exon2;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 16316 16630 . - 0 ID=cds.g9808.t1;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 16105 16196 . - . ID=g9808.t1.exon3;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 16105 16196 . - 0 ID=cds.g9808.t1;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 15071 15944 . - . ID=g9808.t1.exon4;Parent=g9808.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 15071 15944 . - 1 ID=cds.g9808.t1;Parent=g9808.t1 #PROT g9808.t1 g9808 MSTPSSRTGDEVEAVRVAVQDSKGRPLRGAKRRRNNADAESGEDDVYADTKRARVDVEEPVIDGAAVNGARDAAGKPPSKEGSAARKRDATPSQDDSSPKQRNIIRIRRPARTASGTETPDVAEDPSRPSSVLKDAQRDADGLSGNPSAEDVRVETPLGTLSAGDKEREKSKENGEKETGKGEGGVDGHVTASVETPVDEPDPEETFFGIRRDPNMRIRVGDEFQCAVPQWRGSQSMLGQGRGKEGVQVWTPPEYEDEELSATLEDYLRLANSPIVYGGAVHPDHALDVLVRNKYCFRQAVTELVTCEPDSPCTQCGTPRPDVLLPEERRSYDAAFATFGKNFRRIANTVGKPVGSIVGHYYKWKKANSAKYHEYISRFRRRHVVRDAVQGASVEAMRKPPQSSAGNASPPAGGSKAPLAHDTKKCGNCNTRTTTQWRHGRYNEDLCNACGIYYTKNGVYRPVDLDGDGRLSRGRKQRAEEPAPPRKEKEKEKEKEKEKEKEKDGKGERERERDRERERDRDKKDKERERDRERERDRGEKEKERERERDRERERDRERDKKDKERDRDYKVARMPDRPRHDVKSAARPSQKDGGPFVCVTCGRSFHSVYSLNGHKATHIGGASHRNAVAAKCCSACKSVESRLWRKGPNNDILCADCGVYFLIYGTLRV* # ORIGINAL: g9813.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 30958 34222 . + . ID=g9813;Name=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 30958 34222 . + . ID=g9813.t1;Parent=g9813;Name=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 30958 31236 . + . ID=g9813.t1.exon1;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 30958 31236 . + 0 ID=cds.g9813.t1;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 31529 33084 . + . ID=g9813.t1.exon2;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 31529 33084 . + 0 ID=cds.g9813.t1;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 33383 33538 . + . ID=g9813.t1.exon3;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 33383 33538 . + 1 ID=cds.g9813.t1;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 33869 34001 . + . ID=g9813.t1.exon4;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 33869 34001 . + 1 ID=cds.g9813.t1;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 34145 34222 . + . ID=g9813.t1.exon5;Parent=g9813.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 34145 34222 . + 0 ID=cds.g9813.t1;Parent=g9813.t1 #PROT g9813.t1 g9813 MSPPGGKHFDAASLSIAAWRTVAGAVDKAHVYLDFESGELMRMCGADTLLWKGGALSVRQLPPAAAETRDGHASDGAATATDIASQSNADIKKVCVVVSTPLDDAKAPLKRLVSSCSSCTACTVFCAVSEATHVLLGLVSIGASDGTYKFHEHLIANWMPALRGREDQGHVYVVHAPLLVAQVTSSLFTLPHWSRMYPPPPNAHAIAHTTHSAHAAALADGGLPRHTARDARTLAGGLASLFDAMETREECFCVGHVALFVGSELARLRTASPPPQHSRRASIVIVDRTLDLASAASHADNLADRIYGTLPRRQSHSIDVAVDYTPLYCDPPDVLASAAAVAGVAHGALLHGHDARACGILTQIAESPKSRDAAAAARHAAVDLASKEGVDLGADLQRLLMGKATAEHIASVVRALALADDGRILVSHVAAVDVLLAAAIALAATTKDKRIERLLAAEKVIQLSCAEAKASASGATHPYRQLADLVRSTPDMLPFDTLVLLVHVLSLVGPHGHDDAQAGYLRMHLAESIVAWTAAASGRGVPVDARNISWFGERALSIAGVGSIDSGVSCVLGALAGADEGRLRDAVEDRLQALIGALVDIGGDRARLQRFGELVATTASVSGSPFQPLLAQLADAILDERRPELPDLENKSVGLKGLLKSGFGRFLSSVKPRPDNHPLLVIVVIGGVTFDEVRQVVEAAQVHRRDMQVVVGSTTLSTPETMLTALCAQLAPS* # ORIGINAL: g9810.t1 original gene structure, not modified by PASA NODE_137_length_35875_cov_40.5099 AUGUSTUS gene 20967 22766 . - . ID=g9810;Name=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS mRNA 20967 22766 . - . ID=g9810.t1;Parent=g9810;Name=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 22680 22766 . - . ID=g9810.t1.exon1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 22680 22766 . - 0 ID=cds.g9810.t1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 22171 22350 . - . ID=g9810.t1.exon2;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 22171 22350 . - 0 ID=cds.g9810.t1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 21946 22004 . - . ID=g9810.t1.exon3;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 21946 22004 . - 0 ID=cds.g9810.t1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 21460 21799 . - . ID=g9810.t1.exon4;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 21460 21799 . - 1 ID=cds.g9810.t1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 21233 21299 . - . ID=g9810.t1.exon5;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 21233 21299 . - 0 ID=cds.g9810.t1;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS exon 20967 21040 . - . ID=g9810.t1.exon6;Parent=g9810.t1 NODE_137_length_35875_cov_40.5099 AUGUSTUS CDS 20967 21040 . - 2 ID=cds.g9810.t1;Parent=g9810.t1 #PROT g9810.t1 g9810 MEPKIGDIRIYGPALSAILSTVGDSHGDGRRDFTETKIVVSGHLPLPGGFRLQRGSGTLDTQYLLYLLGPEGLRGVIGWYKFRRSATLQMSLRDHAVQSGLERLLLAECKCPLTTCFVFSAWRNVSGSTHTFQYAAFYGVNGRTDSGNAPPSTSHVRAVPVRVFNMGQTPRSAYRTPTGDDVRPADSHVVSQRASLQPSPDVRTADACRAELQCASVIEEIKVLARKVVISDSGVAALRSAREPEIAFEEERSMNLRKSVEAIDLIEL* # PASA_UPDATE: g9811.t1, single gene model update, valid-1, status:[pasa:asmbl_1400,status:3], valid-1 NODE_137_length_35875_cov_40.5099 . gene 23122 27241 . + . ID=g9811;Name=g9811.t1 NODE_137_length_35875_cov_40.5099 . mRNA 23122 27241 . + . ID=g9811.t1;Parent=g9811;Name=g9811.t1 NODE_137_length_35875_cov_40.5099 . five_prime_UTR 23122 23303 . + . ID=g9811.t1.utr5p1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 23122 23311 . + . ID=g9811.t1.exon1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 23304 23311 . + 0 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 23482 24361 . + . ID=g9811.t1.exon2;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 23482 24361 . + 1 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 24720 24979 . + . ID=g9811.t1.exon3;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 24720 24979 . + 0 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 25176 25355 . + . ID=g9811.t1.exon4;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 25176 25355 . + 1 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 25490 25868 . + . ID=g9811.t1.exon5;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 25490 25868 . + 1 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 26294 26569 . + . ID=g9811.t1.exon6;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 26294 26569 . + 0 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . exon 26850 27241 . + . ID=g9811.t1.exon7;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . CDS 26850 26927 . + 0 ID=cds.g9811.t1;Parent=g9811.t1 NODE_137_length_35875_cov_40.5099 . three_prime_UTR 26928 27241 . + . ID=g9811.t1.utr3p1;Parent=g9811.t1 #PROT g9811.t1 g9811 MASLESHVAGIAQQASLRLTKVWDEMGLDDSERRARGSEVFRAVEEAFAQLIASETSRRDTMQSAVQEAVAAIAQIASELGEPMVVVVLSPSSGYQLMAGLARQSLQRQHEALMRRLDDLERMRFERIEQMTRLLSRIEALEEIISLPETDTGAHSHTAPQLSTQQMGRLHARLDALEGEQSRRMRVASESIVAVVALWRELGEGAVTPFERTVLRAGESVSDASGAPSIAVSDANIDALGQLRASLEGERRSRHAQMSQMAARIHVLWERLDVTVTERDAFGRRNAGLSRAALDAHRNELGRLEGLKAANVARFVLIAKEDLRRAWDQCHVSADQRAMFPAFDDDCPMDDDERLRALEEETERLTAHRRDNEELYAAIERRIYLWSELERMEIEGNDPGRLSNRGGMLLKEEKLRNAIVRELPRLRDKIVVMATQCEARTGRYFLVNGERYLHVMDAEEETHRQFKEDQRRLRMRPKDDAHTSDASGAHGAHSTPGKKVGATGGPSKFKTMPTTPGSTRKTPAATPSSTRKPATLPPSTAIRAAAAVNGATPTKALAQPAYDPKLTATTPRRVLGEMGAPPQQQAPLASYPKTPTSQHPSHTQAVKAVVQSHVMHPQPHLTPRAAGHPPDNGGVASFNFAAFAENIHAVDDDICSYDDFEFDLNQTNMKHYRSSEMPQHEDCDAY* # ORIGINAL: g2954.t1 original gene structure, not modified by PASA NODE_12049_length_276_cov_38.9154_potentialcontaminant AUGUSTUS gene 2 276 . + . ID=g2954;Name=g2954.t1 NODE_12049_length_276_cov_38.9154_potentialcontaminant AUGUSTUS mRNA 2 276 . + . ID=g2954.t1;Parent=g2954;Name=g2954.t1 NODE_12049_length_276_cov_38.9154_potentialcontaminant AUGUSTUS exon 2 276 . + . ID=g2954.t1.exon1;Parent=g2954.t1 NODE_12049_length_276_cov_38.9154_potentialcontaminant AUGUSTUS CDS 2 276 . + 2 ID=cds.g2954.t1;Parent=g2954.t1 #PROT g2954.t1 g2954 RSSSLATPSTPAATAVSWTTPSPGCSRTAAARSSPRPPSPTTPAPALPPAAPPTSTLSPSAPPSPATTTCRRPRTPWPPTASPTALSRSPS # ORIGINAL: g4723.t1 original gene structure, not modified by PASA NODE_3504_length_3308_cov_39.389 AUGUSTUS gene 1 361 . - . ID=g4723;Name=g4723.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS mRNA 1 361 . - . ID=g4723.t1;Parent=g4723;Name=g4723.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 1 361 . - . ID=g4723.t1.exon1;Parent=g4723.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 1 361 . - 0 ID=cds.g4723.t1;Parent=g4723.t1 #PROT g4723.t1 g4723 MAKAGREADRAADRHGGGGGFATRSRRLSAGTSGLRPLFTPALLVTCFASCLVAAALSLTDAATDAPAVTCPGNVFNFTWLPAANHSVAQDNSMVGVHLLAPMCGGLVAFLGTQGRMRCS # ORIGINAL: g4724.t1 original gene structure, not modified by PASA NODE_3504_length_3308_cov_39.389 AUGUSTUS gene 1018 3217 . + . ID=g4724;Name=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS mRNA 1018 3217 . + . ID=g4724.t1;Parent=g4724;Name=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 1018 1222 . + . ID=g4724.t1.exon1;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 1018 1222 . + 0 ID=cds.g4724.t1;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 1345 1430 . + . ID=g4724.t1.exon2;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 1345 1430 . + 2 ID=cds.g4724.t1;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 2205 2346 . + . ID=g4724.t1.exon3;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 2205 2346 . + 0 ID=cds.g4724.t1;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 2547 2620 . + . ID=g4724.t1.exon4;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 2547 2620 . + 2 ID=cds.g4724.t1;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS exon 3008 3217 . + . ID=g4724.t1.exon5;Parent=g4724.t1 NODE_3504_length_3308_cov_39.389 AUGUSTUS CDS 3008 3217 . + 0 ID=cds.g4724.t1;Parent=g4724.t1 #PROT g4724.t1 g4724 MLFVHVRRLAASLARHGRQLQNVPSVPAGPVVFCVRSQCVVRALSSSTATTLLHRGPPSRRVVPFVSKGYYCPRRSMFIQTQETPNQNSLKFVPGVDVLDAGTVDFPDARAAQRSPLARALFRINGVSRVFFAPKFITVSKNDDAVWSLMKPDVYAAIMDFFASNLPILSDEERPSDTTITADDNETVAMIKELMDTRIRPFVQEDGGDIVYMGFDDGIVKVFVYPRVLCDSFNCYSL* # ORIGINAL: g11760.t1 original gene structure, not modified by PASA NODE_2158_length_7477_cov_38.0072 AUGUSTUS gene 6175 7419 . + . ID=g11760;Name=g11760.t1 NODE_2158_length_7477_cov_38.0072 AUGUSTUS mRNA 6175 7419 . + . ID=g11760.t1;Parent=g11760;Name=g11760.t1 NODE_2158_length_7477_cov_38.0072 AUGUSTUS exon 6175 6837 . + . ID=g11760.t1.exon1;Parent=g11760.t1 NODE_2158_length_7477_cov_38.0072 AUGUSTUS CDS 6175 6837 . + 0 ID=cds.g11760.t1;Parent=g11760.t1 NODE_2158_length_7477_cov_38.0072 AUGUSTUS exon 7237 7419 . + . ID=g11760.t1.exon2;Parent=g11760.t1 NODE_2158_length_7477_cov_38.0072 AUGUSTUS CDS 7237 7419 . + 0 ID=cds.g11760.t1;Parent=g11760.t1 #PROT g11760.t1 g11760 MSGHNWDAETRRVDDGIDTTSAFFMRLRLASEDERKPVIDQISNVVRSWAVRSTQQQQQSVNVDVQGILELATKSGQSSPRRLSVGNIVDDDADVSLRNQPAELLRAHLPTVLRLSVECPFRDIRKAFKALLVEIRDLGVRVPRRRFGGPSRFIPKGDLVVRSDDNQHFVDTFLHDCRVSHMIRVIAYHPSFLADFLDTHHFLMRGDGPLPLDWRNYIAIMGSSRHKCKYLMSVQEDGYRANGGDVSWLASVANAPAKLQSLIELNALLAHRPWLVNRDQMQ # PASA_UPDATE: g11759.t1, single gene model update, valid-1, status:[pasa:asmbl_3643,status:12], valid-1 NODE_2158_length_7477_cov_38.0072 . gene 1302 4204 . + . ID=g11759;Name=g11759.t1 NODE_2158_length_7477_cov_38.0072 . mRNA 1302 4204 . + . ID=g11759.t1;Parent=g11759;Name=g11759.t1 NODE_2158_length_7477_cov_38.0072 . five_prime_UTR 1302 1419 . + . ID=g11759.t1.utr5p1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 1302 1824 . + . ID=g11759.t1.exon1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 1420 1824 . + 0 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 2092 2210 . + . ID=g11759.t1.exon2;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 2092 2210 . + 0 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 2673 2775 . + . ID=g11759.t1.exon3;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 2673 2775 . + 1 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 3158 3283 . + . ID=g11759.t1.exon4;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 3158 3283 . + 0 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 3742 3804 . + . ID=g11759.t1.exon5;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 3742 3804 . + 0 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . exon 4026 4204 . + . ID=g11759.t1.exon6;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . CDS 4026 4133 . + 0 ID=cds.g11759.t1;Parent=g11759.t1 NODE_2158_length_7477_cov_38.0072 . three_prime_UTR 4134 4204 . + . ID=g11759.t1.utr3p1;Parent=g11759.t1 #PROT g11759.t1 g11759 MATLRCYNKACAKDYNEAENNDEACRFHPGVPIFHEGLKGWSCCKKRTSDFSEFLEMPGCTRGPHNNVKPPEPEKAPKPEPMKEGEVITVEAPRKPIQQKPLEISTTEKVKLPVSIAASAQPPVAPTAAQGNAAAEVVVAGTSCKNNACGKTYVDASSDDEICRYHPGSPVFHEGSKYWSCCTKRTHDFDEFLNQKGCTDGKHLWIKPVDAAAKKVSCRYDWFQTGTHVSLSVYAKKVDPTQSSFEANSSSLNVSILFDGSNLFSLDIHLGGTIDVSASKVEIMGTKVEIKLKKGDAASWSNLTAPA* # PASA_UPDATE: g6195.t1, single gene model update, valid-1, status:[pasa:asmbl_6240,status:12], valid-1 NODE_357_length_26087_cov_44.9647 . gene 135 3051 . - . ID=g6195;Name=g6195.t1 NODE_357_length_26087_cov_44.9647 . mRNA 135 3051 . - . ID=g6195.t1;Parent=g6195;Name=g6195.t1 NODE_357_length_26087_cov_44.9647 . five_prime_UTR 2758 3051 . - . ID=g6195.t1.utr5p1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . exon 2614 3051 . - . ID=g6195.t1.exon1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . CDS 2614 2757 . - 0 ID=cds.g6195.t1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . exon 2360 2510 . - . ID=g6195.t1.exon2;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . CDS 2360 2510 . - 0 ID=cds.g6195.t1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . exon 1417 1628 . - . ID=g6195.t1.exon3;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . CDS 1417 1628 . - 2 ID=cds.g6195.t1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . exon 818 1045 . - . ID=g6195.t1.exon4;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . CDS 818 1045 . - 0 ID=cds.g6195.t1;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . exon 135 299 . - . ID=g6195.t1.exon5;Parent=g6195.t1 NODE_357_length_26087_cov_44.9647 . CDS 135 299 . - 0 ID=cds.g6195.t1;Parent=g6195.t1;3_prime_partial=true #PROT g6195.t1 g6195 MDGLAAYGSGSEDEGHVETAAAAGVSAPSVTSLKAKLGLNLAPEVATATDLLAGMRHIDPHAKIVSYNPKFDEMFAPAAGPAHPFRTQQQTAVKNTLTGYVEPAEMHDFHFERQRRTFTSYGYAMDPSLDASGVRDTFVGDVTRAQQFGGVTVDETSSSHKKEKRKREADGAVDDLEGFKGPWRPFEDEKKVARPSDEQMEVLATQVKEGAKAKEREKKEDAETSVLHIKDDIDYLGRSFLAVPQDLDVRLDADATPEKCFLPKKCIHTWTGHTKGVSTVKLFPGSGHLLLSAGMDGKIK # ORIGINAL: g6197.t1 original gene structure, not modified by PASA NODE_357_length_26087_cov_44.9647 AUGUSTUS gene 9951 11098 . + . ID=g6197;Name=g6197.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS mRNA 9951 11098 . + . ID=g6197.t1;Parent=g6197;Name=g6197.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 9951 10152 . + . ID=g6197.t1.exon1;Parent=g6197.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 9951 10152 . + 0 ID=cds.g6197.t1;Parent=g6197.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 10359 11098 . + . ID=g6197.t1.exon2;Parent=g6197.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 10359 11098 . + 2 ID=cds.g6197.t1;Parent=g6197.t1 #PROT g6197.t1 g6197 MGQFATWTSSAAWPPAGYRTASKRTIRSDLIVVSIVLALVIPSLAQQRYYSATPIFTLQSGQSGDGYGHAIAAGDFDGDGSPDVVAGAPYYTPYQDIATSGMYRDRTQEGAVYFHYAPQQFGGSRDLASMFTGLSRPAGFNVSCAINVGDKYLHILGGSVAIRVDLTTNTSTTDTIANRFGISTIAFQSDLDACSHMRLNTNAAPLVYSTAEIYFFKGTDFLIVSTTTMREVTGSRALISTRFTQMPFTSNLQSVLYIPPSQVVFFKDGNYSVWDIENRKLANFPNTNTKPVNTSLYNGPYGTAFKGTVTILD* # ORIGINAL: g6196.t1 original gene structure, not modified by PASA NODE_357_length_26087_cov_44.9647 AUGUSTUS gene 4120 8685 . - . ID=g6196;Name=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS mRNA 4120 8685 . - . ID=g6196.t1;Parent=g6196;Name=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 8560 8685 . - . ID=g6196.t1.exon1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 8560 8685 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 8158 8323 . - . ID=g6196.t1.exon2;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 8158 8323 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 7751 7908 . - . ID=g6196.t1.exon3;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 7751 7908 . - 2 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 7414 7506 . - . ID=g6196.t1.exon4;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 7414 7506 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 7034 7213 . - . ID=g6196.t1.exon5;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 7034 7213 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 6806 6933 . - . ID=g6196.t1.exon6;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 6806 6933 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 6305 6623 . - . ID=g6196.t1.exon7;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 6305 6623 . - 1 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 5487 6136 . - . ID=g6196.t1.exon8;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 5487 6136 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 4373 4760 . - . ID=g6196.t1.exon9;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 4373 4760 . - 1 ID=cds.g6196.t1;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 4120 4257 . - . ID=g6196.t1.exon10;Parent=g6196.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 4120 4257 . - 0 ID=cds.g6196.t1;Parent=g6196.t1 #PROT g6196.t1 g6196 MRCKYLNAIHFIAPGFTGEELQVQVSVMPETCKFVDLYILMDFSGSMDDDLDNIRKLAKNLTAVTQSLCNSPCANVTGGAQCARIGFGSFIEKPRHPAGIWSSSSYWEKNSPVNSVFRPRFNLSSNMADFEQYLSTLSANEIKSNYDWAEDQFEAMLQVLRCRRLINWTPRDDSKKQPRRIILVLTDADFHLRGEGGVLGLNEPNPDKCYVDESGDLSNTNNVYAQIDKASLLYDYPTLWQIRNALISTNTVPIFAASIVSTSSAGGSKNEKIYPDLLKTLGFGFSTTLNSTSENVMEVLRDSYNSISSTLSMAVAQNGNEVLVRSISPSAYSGITAGSTYPFTVTLYDDGSLGKAPNATVNLSIMGFGNIQIVVIRGVDCSASCTKFCSVNGTALCKNGAACECGRCDCAARFKGTNCECDANTQCPTVNGAECNGQGACECGRCKCRDPFNDPGYPTCTCFVGPCPTKTAGLVCSGHGACTCSSCNCQSGWTLADCSCKSGDNKTCGVGEAIVCNNHGKCNTCGQCDCDPGFRGPTCDTVVPSCPTNCSGHGTCVGAGQCACVDNYTGSDCACPPCKDPTCNERGTCECGVCKCIQGYDSSTDCNGRGTCDCGICKCDLAEYDTASPKGACEYCNIDYVNPDTVTSNQCPNDTCTAYAGSCDGCMSIPGCFKCADFSGCYNAVNRDIKCNGKYFTSSSSCPLLGRLTTTEVAGVFGGVFGGLIAAGAAGIIAYKVINVMRDKKEWEKFESEKAKSAWKADQNPLYVASTIEHVNPIYND* # ORIGINAL: g6198.t1 original gene structure, not modified by PASA NODE_357_length_26087_cov_44.9647 AUGUSTUS gene 11165 18625 . + . ID=g6198;Name=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS mRNA 11165 18625 . + . ID=g6198.t1;Parent=g6198;Name=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 11165 11184 . + . ID=g6198.t1.exon1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 11165 11184 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 11498 11665 . + . ID=g6198.t1.exon2;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 11498 11665 . + 1 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 11933 12241 . + . ID=g6198.t1.exon3;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 11933 12241 . + 1 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 12508 12560 . + . ID=g6198.t1.exon4;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 12508 12560 . + 1 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 12879 13071 . + . ID=g6198.t1.exon5;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 12879 13071 . + 2 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 13224 13405 . + . ID=g6198.t1.exon6;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 13224 13405 . + 1 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 13604 13789 . + . ID=g6198.t1.exon7;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 13604 13789 . + 2 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 14017 14237 . + . ID=g6198.t1.exon8;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 14017 14237 . + 2 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 14353 14867 . + . ID=g6198.t1.exon9;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 14353 14867 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 15075 15159 . + . ID=g6198.t1.exon10;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 15075 15159 . + 1 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 15420 15542 . + . ID=g6198.t1.exon11;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 15420 15542 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 15751 16783 . + . ID=g6198.t1.exon12;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 15751 16783 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 16972 17222 . + . ID=g6198.t1.exon13;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 16972 17222 . + 2 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 17387 17530 . + . ID=g6198.t1.exon14;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 17387 17530 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 17810 18380 . + . ID=g6198.t1.exon15;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 17810 18380 . + 0 ID=cds.g6198.t1;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS exon 18504 18625 . + . ID=g6198.t1.exon16;Parent=g6198.t1 NODE_357_length_26087_cov_44.9647 AUGUSTUS CDS 18504 18625 . + 2 ID=cds.g6198.t1;Parent=g6198.t1 #PROT g6198.t1 g6198 MVLSNGTYPAASGVTQFKTATRWRSWFGSAISSGKTAPNTIDSVVIGAFGTDLNNANSPLSTGASNYDNGRVYLYAGRTGGVAPPQSAAVSQFGYLYTPCQFGYSVGIGLANGEGYTRVVAGAISANILTGTVFSYPLNGVLNDSPNIARGSTPPTLDFPIRYASKFGSAIEVTGDFDNDGVNDLVVGSIKGDYDQDVLYGGDVSIFSGAYDELGYDVILSRFWQRSGTVIGGRFGHSLLSVDINDDGFDDLFVGAPSASPGGRVYLFLGSQRGLSTVESWTFDGPATDEEFGYSMAAIGDVNKDRYLDIAIGAPFYDGRNGRVFVFLGGRNGPQATPDEILLGSRLSPSKGQLFGYSLASADFDKDTYPDILVGVPRTSDNGGGAVVCVRSQTQADISLRIVLNSATILTNRSFSYELIVENAGPSTVDNLTITANVPVLNPQVPTPVVTRNGKPQNYTILASLLWSFVVSLSKNAKETFLVNYSGFNTSNEYPSTVTLSAASTIPDGIVDPFPESNVAEATVSIFSVADLFITGTVTIKGPSDTVKIRQGDPLTMNNITVGNRGPSAAFGLTVTLTFPAGMYLDTISPSGSCNGRGPVVCAVGRLQAGSNFTISNLKFATPGLTTSVAITVRAVSSSVGEATATSNLIDVAATGTRLQVNSLKVESSNGDSLYIGASVRVIAQVTNLGPRDGVNTQVFLEVPSTFEKIQADLQPSTIPSTYNETSRFAGSVYNVTYTATTLPFQAQIVATTVFRVLSNAPAGNFTVRCVADALSRNGTTDDYIKTASITLQSKSDLTFTLSDLPRVKPVVGDIFNATAIAVNIGPSDMLAAANNTVTLVIGDVGSLLRVGAFFNLSSGCNASSINDNGTVHITCTAQGLVVGDSATFYAPFKVPRNDSVTVKSLDSSGTVRKNYTIAVERRVNLQLFIQAQSNEVRTQQPTQYSFIVRNGGRNSPTGIVVTHTLSQSMRVQSATFNNGATDVPCNITNPLRLVCNIPSSLLSNSSSRVRGRVRLTGISAGLATIAVAVESNEVDMDTSDNTGNINLFVKETSDLVLDSKFDPLFPYQGGKLLLTHRIFTLGPSNASNVVLTITVPNYAVALDPADVKNNCSSTVSDESSTLVCAFASIRVDESIAPRFSFTINANFTGSFPYISRITQSPLDEGSTELSVSNNIRSLDIEVFEPYADLAVQAGQAPTITNVAGSLVYINLTITNKGPLAVPSVLLSPSYPLSFTPQSVIISVSDDNTFVPIANCSGRTTACPLPGMNLTTVITFIVSGIYTPPAQTITKLEFVFVVGSPVRDIALSNSRINVVAPVVAPLASVAVESSSGGVAGWIIAVAVVGAVASIGAVVFALHHFKFFSRKLPPLMEYDGANPVGSTSVEPPPLED* # PASA_UPDATE: g6199.t1, single gene model update, valid-1, status:[pasa:asmbl_6241,status:12], valid-1 NODE_357_length_26087_cov_44.9647 . gene 19294 25315 . - . ID=g6199;Name=g6199.t1 NODE_357_length_26087_cov_44.9647 . mRNA 19294 25315 . - . ID=g6199.t1;Parent=g6199;Name=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 25107 25315 . - . ID=g6199.t1.exon1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 25107 25315 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 24742 24923 . - . ID=g6199.t1.exon2;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 24742 24923 . - 1 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 24368 24553 . - . ID=g6199.t1.exon3;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 24368 24553 . - 2 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 23938 24158 . - . ID=g6199.t1.exon4;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 23938 24158 . - 2 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 23292 23809 . - . ID=g6199.t1.exon5;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 23292 23809 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 23020 23104 . - . ID=g6199.t1.exon6;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 23020 23104 . - 1 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 22696 22821 . - . ID=g6199.t1.exon7;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 22696 22821 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 21366 22419 . - . ID=g6199.t1.exon8;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 21366 22419 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 20924 21177 . - . ID=g6199.t1.exon9;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 20924 21177 . - 2 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 20440 20592 . - . ID=g6199.t1.exon10;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 20440 20592 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 19707 20280 . - . ID=g6199.t1.exon11;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 19707 20280 . - 0 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . exon 19294 19586 . - . ID=g6199.t1.exon12;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . CDS 19465 19586 . - 2 ID=cds.g6199.t1;Parent=g6199.t1 NODE_357_length_26087_cov_44.9647 . three_prime_UTR 19294 19464 . - . ID=g6199.t1.utr3p1;Parent=g6199.t1 #PROT g6199.t1 g6199 MLETDLVVGSIKGDQTQDIIFGGDVSIFSGVYNEVPSTYQSLTIIWKRSGTIVGGRFGHSLLSLDINADGFDDLFVGAPSGSPGGRVYLFLGSRSGLSTVESWTFDGPATDEEFGYSMAAIGDVNKDGYPDVAIGAPFYDGRNGRVFVFLGGRNGPQATPDEILLGSRLSPSKGQLFGYSLASADFDKDTYPDILVGVPRTSGTGGGAVVCVRSQPQANINLRIVPKNTTIFTTDTFSYQLIIGNAGPSTVNNLRITANVPVLNTQVTAPVVTLNGLAVGYTTPTPLLWSFVIPTLANNTNAILLVNYGSFNTSVQYPSTVTFSATSTMPDGIVDPFPESDVTETAVSIVSVADLFIAGNVTINGTTNTVKIRQGDPLTMNNITVGNRGPSAAFGLTVTLTFPAGMYLDTIAPSDLCSGRGPVVCAVGRLPAGSNFTLSNLKFATPGLTTSDAVTVRAVSSSVGEATAKSNLIDVAAVGTKLQVNSVKIESSNGDATLFVGASVRVIAQVTNLGPRDGVNTIVSLEVPSTFEKIQADLQPSTLPSTYSEGSRFVGSAYNVSYTATTLPFQTQIVATTVFRVLSNATAGAFTVRCVADARDRTGTTDDYVKSAPATLQRKSDLTFTLSDLPRVKPVVGDIFNATATAVNVGPSDMLAAATNTVTLVIGDVGSPLIANAFVSRSPDCAAPSITNGVATITCTARGLVVRGSVTYYVAFKLPATDSVTVKSLDSSGAERKNYTIAVERRVNLQLFIQAQSEEVRTQQPTLYSFIVRNGGRNNATGIVITHTLSQNTRVPPANHFSVQSATFNNGTADVPCNITNPLRLVCNIPSSLMSAGSPQLRGRVRLTGINAGVATIAVAVESNEVDMDTSDNTGNINLFVKETSDLVLDSKFDPLFPYQGGKLLLTHRIFTLGPSNASNVVLTLTVPNYAVALDPADVTKNNCSSTVAVDGSRTFVCGMASIIHVDESITAQFSFNVNASFSGASFPYYSRVSQSPLEEGNTESSVSNNIRSLDIAVYEPYADLAVQAGQAPTITNVAGSLVYINLTITNKGPLAVPSVLLSHLPYPLSFTPQSVIISVSDNNTFVPIANCSGRATACPLPGMNLTTVITFIVSGIYTPPAQTITKLEFVFEVTSPVRDLTDSNSRISVVAPVVAPLASVAVESSSSGVAGWIIAVAVVGAVASIGAVVFALHHFKFFSRKLPPLMEYDGANPVGSTSVEPPPLED* # ORIGINAL: g104.t1 original gene structure, not modified by PASA NODE_3433_length_3473_cov_39.2054 AUGUSTUS gene 817 3347 . - . ID=g104;Name=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS mRNA 817 3347 . - . ID=g104.t1;Parent=g104;Name=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 3237 3347 . - . ID=g104.t1.exon1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 3237 3347 . - 0 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 2878 2965 . - . ID=g104.t1.exon2;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 2878 2965 . - 0 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 2466 2675 . - . ID=g104.t1.exon3;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 2466 2675 . - 2 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 2115 2257 . - . ID=g104.t1.exon4;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 2115 2257 . - 2 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 1819 1983 . - . ID=g104.t1.exon5;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 1819 1983 . - 0 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 1247 1355 . - . ID=g104.t1.exon6;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 1247 1355 . - 0 ID=cds.g104.t1;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS exon 817 917 . - . ID=g104.t1.exon7;Parent=g104.t1 NODE_3433_length_3473_cov_39.2054 AUGUSTUS CDS 817 917 . - 2 ID=cds.g104.t1;Parent=g104.t1 #PROT g104.t1 g104 MVDGDLDALQSNDNGNSGDPKLYRMRSDLSDSTGDTDEAIEVTAMELSSLCIYCRPARFHSFSHAAYNFTPTEMSSFGEIKAKKLCSSSGDQFVGFSRAHLSRVYPGGKRVGSSNPNPQLFWNCGVQMVALNYQTSDGPMQMNDARFMVNGRCGYVLKPQFMRDPASSFDPNKPSGTPKKYSLKVLLGRCLADISAHATVSPYVEVRVDGIPADAAKWVTSTVKSNAFNPTWSETFEFSVHVPELVLLSFTVYDSRPRTHTVLGHYSLPLTSARQGLRSVPLKREHGETMHSAALLVLLGASSKTAKA* # PASA_UPDATE: g565.t1, single gene model update, valid-1, status:[pasa:asmbl_3813,status:12], valid-1 NODE_2224_length_7174_cov_37.2074 . gene 5408 6115 . + . ID=g565;Name=g565.t1 NODE_2224_length_7174_cov_37.2074 . mRNA 5408 6115 . + . ID=g565.t1;Parent=g565;Name=g565.t1 NODE_2224_length_7174_cov_37.2074 . five_prime_UTR 5408 5463 . + . ID=g565.t1.utr5p1;Parent=g565.t1 NODE_2224_length_7174_cov_37.2074 . exon 5408 5572 . + . ID=g565.t1.exon1;Parent=g565.t1 NODE_2224_length_7174_cov_37.2074 . CDS 5464 5572 . + 0 ID=cds.g565.t1;Parent=g565.t1 NODE_2224_length_7174_cov_37.2074 . exon 5940 6115 . + . ID=g565.t1.exon2;Parent=g565.t1 NODE_2224_length_7174_cov_37.2074 . CDS 5940 6115 . + 2 ID=cds.g565.t1;Parent=g565.t1 #PROT g565.t1 g565 MAEQLTLKGTLKGHNGWVTQIATTPENPDIILSSSRDKSIIVWQLTRDENNYGIPKKSLHGHGHFVSDVVLSSDGQFALSGSWDHTLRLWDLNT* # PASA_UPDATE: g564.t1, single gene model update, valid-1, status:[pasa:asmbl_3811,status:12], valid-1 NODE_2224_length_7174_cov_37.2074 . gene 238 4444 . - . ID=g564;Name=g564.t1 NODE_2224_length_7174_cov_37.2074 . mRNA 238 4444 . - . ID=g564.t1;Parent=g564;Name=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 4127 4444 . - . ID=g564.t1.exon1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 4127 4444 . - 0 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 3878 3921 . - . ID=g564.t1.exon2;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 3878 3921 . - 0 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 3531 3621 . - . ID=g564.t1.exon3;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 3531 3621 . - 1 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 2411 3320 . - . ID=g564.t1.exon4;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 2411 3320 . - 0 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 1942 2081 . - . ID=g564.t1.exon5;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 1942 2081 . - 2 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 837 1611 . - . ID=g564.t1.exon6;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 837 1611 . - 0 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 593 673 . - . ID=g564.t1.exon7;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 593 673 . - 2 ID=cds.g564.t1;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . exon 238 364 . - . ID=g564.t1.exon8;Parent=g564.t1 NODE_2224_length_7174_cov_37.2074 . CDS 238 364 . - 2 ID=cds.g564.t1;Parent=g564.t1;3_prime_partial=true #PROT g564.t1 g564 MKGDLSAPSAAPAADAPCFPAMLSIPSPPSPQASQQSQPSQPSQPPLPTVASHPSLTSLPSSESLLKSSWLLRLFRSDFFDASIAIAYLHKYTDEGVQDYLSNELFRLPADDLEFYLPQLINMFVQRPLGTDAIERFLLHRCSTSCHFALLAVWWLDSTMQDGVDPHRHARCLRLRSNILSQHVTKESANNRIPQSPRKASPMGSTGDVSTASFSAAPSASVSLNASMSSSMSASGAMAGGSLGLSTAGRLFGGGNFMMGAPSSRNSVEEDIGGSMESVSEGLAEESCAASDDGSPGASTGAATLVDNGDGAASSSGAGAAGPGGAGTLRRVRSMCHRRSISALPQGAYTFYSSNSNIMRTFSQHRMPVDLSSGRAFEPGWIKSSVSSPTLYSMGLMGPRGDMMSADTSGPGCGAAAVLEGDLRVHHVIAGQMSFVRALMDIGSRLTCLGAAERKTQLYAEIALLNLNLPARVYFPLARHTRHHLVRIPPEEAVTLNSKEKVPYMILFETVTCDDVLASPLPTKVPEKPRYHQHARQPSISRESASASPSPAARPERLDALSPGAATGVANAMAVSESGANSLAVPPPKQAEVGSHITVSREQGPPAEGDATATTSAHAHAHSPQRATFSVGADHAGSDSSDTESASHNDAQKEDKGTRCRSNSSLANDEEASTACDNGSVVTTNSLECVIPVNAINAQDVSAASPAQAAEVHESLVCLDLEDGKDAVEIAAIDIRNRLCEAVTRVAGGRFRRMRDDPSAATLKEPWEQKVERIRNDSPYGRLPGWSLHSAIVKCGDDLRQELLASQLISQFKAIFDKERIALWLRPY # PASA_UPDATE: g566.t1, single gene model update, valid-1, status:[pasa:asmbl_3812,status:12], valid-1 NODE_2224_length_7174_cov_37.2074 . gene 6247 7139 . - . ID=g566;Name=g566.t1 NODE_2224_length_7174_cov_37.2074 . mRNA 6247 7139 . - . ID=g566.t1;Parent=g566;Name=g566.t1 NODE_2224_length_7174_cov_37.2074 . five_prime_UTR 7075 7139 . - . ID=g566.t1.utr5p1;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . exon 6995 7139 . - . ID=g566.t1.exon1;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . CDS 6995 7074 . - 0 ID=cds.g566.t1;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . exon 6425 6659 . - . ID=g566.t1.exon2;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . CDS 6425 6659 . - 1 ID=cds.g566.t1;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . exon 6247 6279 . - . ID=g566.t1.exon3;Parent=g566.t1 NODE_2224_length_7174_cov_37.2074 . CDS 6247 6279 . - 0 ID=cds.g566.t1;Parent=g566.t1 #PROT g566.t1 g566 MSIAVAGRAVYEPDGIFIWCDRDSRAKFGDVSLWSVSPTDIRGVSVHTWVASSTYLKPGEPIYALKRVDLSADDVDATADVAGITSLENEGYECVSAPAPPFDGVMICGCLHDFH* # ORIGINAL: g3181.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 12369 13938 . + . ID=g3181;Name=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 12369 13938 . + . ID=g3181.t1;Parent=g3181;Name=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 12369 12470 . + . ID=g3181.t1.exon1;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 12369 12470 . + 0 ID=cds.g3181.t1;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 12642 12895 . + . ID=g3181.t1.exon2;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 12642 12895 . + 0 ID=cds.g3181.t1;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 13059 13119 . + . ID=g3181.t1.exon3;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 13059 13119 . + 1 ID=cds.g3181.t1;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 13337 13502 . + . ID=g3181.t1.exon4;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 13337 13502 . + 0 ID=cds.g3181.t1;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 13751 13938 . + . ID=g3181.t1.exon5;Parent=g3181.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 13751 13938 . + 2 ID=cds.g3181.t1;Parent=g3181.t1 #PROT g3181.t1 g3181 MADRKSELERKRKKVEELRKAREERRTVFAAEKESLIPANIPTKSSDISDLVSSLLGESSVGSSAVSASSQASLTADDNNGSRDHPGADVQKSGASPSPAAAADGAKFDASSDHHDNTKRQQHRALVQTEVFSVNIVPKELVTYSKEIQTETQAQEQGIESVRPESVDVKKEESPKADNGVQADATSILIEALSAVHPFSQSAAIQKSDTFASFLERTSLVVERALNETYDVTVDYARGDKEDADGYDHHCCTGHC* # ORIGINAL: g3176.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 4896 5342 . - . ID=g3176;Name=g3176.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 4896 5342 . - . ID=g3176.t1;Parent=g3176;Name=g3176.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 4896 5342 . - . ID=g3176.t1.exon1;Parent=g3176.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 4896 5342 . - 0 ID=cds.g3176.t1;Parent=g3176.t1 #PROT g3176.t1 g3176 MNIVRTGSSALWRSVVLASPWISRAHLASAAPLSVTRRLLATDAAASVADGTDAPKELQRQREVIFLKPLGWTKPLQSSEALRAIRAYACVYDSPEKQNVELWVRLDMVDYENTKKKEKKRDPFNILSTLPFQSRKLATICVFAEASL* # PASA_UPDATE: g3183.t1, single gene model update, valid-1, status:[pasa:asmbl_5845,status:12],[pasa:asmbl_5846,status:12],[pasa:asmbl_5848,status:12],[pasa:asmbl_5849,status:12], valid-1 NODE_328_length_26865_cov_40.7619 . gene 18518 22446 . + . ID=g3183;Name=g3183.t1 NODE_328_length_26865_cov_40.7619 . mRNA 18518 22446 . + . ID=g3183.t1;Parent=g3183;Name=g3183.t1 NODE_328_length_26865_cov_40.7619 . five_prime_UTR 18518 18952 . + . ID=g3183.t1.utr5p1;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . exon 18518 20181 . + . ID=g3183.t1.exon1;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . CDS 18953 20181 . + 0 ID=cds.g3183.t1;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . exon 20437 21975 . + . ID=g3183.t1.exon2;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . CDS 20437 21975 . + 1 ID=cds.g3183.t1;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . exon 22228 22446 . + . ID=g3183.t1.exon3;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . CDS 22228 22339 . + 1 ID=cds.g3183.t1;Parent=g3183.t1 NODE_328_length_26865_cov_40.7619 . three_prime_UTR 22340 22446 . + . ID=g3183.t1.utr3p1;Parent=g3183.t1 #PROT g3183.t1 g3183 MGLDDKGKTPEKDKDEDFLRTPIVIKERWRVVSRLGGGAFGQVYIGCDLAKKVDVAVKVEPSINNDKQVLRMEVAVLKKLQGMSQSVCRYYGSGSVDGCNFIVMELLGENLADIRRNQPSQCFSIHTAVLVGMQMLDAIECIHEAGYLHRDIKPSNFAVGRDGPKRSRVYLLDFGLARRHLCDNGKVRSCRVTAGFRGTARYASISAHKSHDLGRKDDLWSLFYVMVELATGKLPWRRIKEKEKIGEMKERTELGTLTSNLPLQFLAFGDYLSQLSYSDKPNYEIVRSLFKRMLTAAGLTTLSPMDWVLPAVAAIPTTAPSADDVNNNNNNNNNNAAPGATAVHAPAAGRAGSNAAASGVSKAVAPPAASTTVAAHGNSNDAQAKTGGHQPLQRQESGKAAHAPASRKRDVRSPTVSPHGAPEASKTANNSGAHSHAHATAHAQVHPHAQATASSIHKRAGRTVSYDTGDMYNREQRSLFLDRQRSLQLKVDTALQAQEAQQLLADEAQARLQGIARVQMQAPPISPREYVASTQHQQQQQQQQQLQQQQPLSPRGAVPPHASAYDDDAQRPDSPLNSKQSDRKDSNGGTPAKKKRERSGSIFSDAAAMIRNFVGGSKGKKDDGEGGEKKKGSESNPTSRRPSATDVTKVMNPTNAADDVGQDALKADEAMVAPLSKTAPLPAADKQATAGASGAANVGAGERAGERVGEDASTYAVREVTMKHQASLGESGTAASFQLGSSLNNSDIRGQSLHYSHGNSGSARTSLHRMSSGSGANNNGGGPAGSSLANSFNGSNAAAGKLSGSPLTPPPVADDVVGPLAAVTGSGGMEGVALLSQVENGAVDVHAASSSSATPPQHSSPEQNGSDKRQAPSGLQSDSAGVIGDRGSSPDVGGNVLRRAASLSAVNPRPPPVPPPNRRAKGRYRLYHKNSTWFDGQSTEVASEGAPIHSLRRDTIAEV* # PASA_UPDATE: g3180.t1, single gene model update, valid-1, status:[pasa:asmbl_5844,status:12], valid-1 NODE_328_length_26865_cov_40.7619 . gene 11080 11778 . - . ID=g3180;Name=g3180.t1 NODE_328_length_26865_cov_40.7619 . mRNA 11080 11778 . - . ID=g3180.t1;Parent=g3180;Name=g3180.t1 NODE_328_length_26865_cov_40.7619 . exon 11080 11778 . - . ID=g3180.t1.exon1;Parent=g3180.t1 NODE_328_length_26865_cov_40.7619 . CDS 11173 11778 . - 0 ID=cds.g3180.t1;Parent=g3180.t1 NODE_328_length_26865_cov_40.7619 . three_prime_UTR 11080 11172 . - . ID=g3180.t1.utr3p1;Parent=g3180.t1 #PROT g3180.t1 g3180 MAAASHRASAWTAGCALAVVLMCMSMLTASACPDSFASLRSPFVRDHLDHAKLNGLWYEQAYHDVAQIGNSCQRFNKTFVANENGVHEDFKVLYGKLPFTVKVFYNITADAGVFIRNAFGAPLYFHSVILDIVTNADGDYVAISEFTCQKIAGIDYVELRFATRGDAADSSVVAPLEERATSLGLKYALKNVDHTFCPSSL* # ORIGINAL: g3179.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 9963 10649 . + . ID=g3179;Name=g3179.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 9963 10649 . + . ID=g3179.t1;Parent=g3179;Name=g3179.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 9963 10649 . + . ID=g3179.t1.exon1;Parent=g3179.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 9963 10649 . + 0 ID=cds.g3179.t1;Parent=g3179.t1 #PROT g3179.t1 g3179 MAQPAARYLLVLDYEATCERDDRSFPHEIIEWPTVLIDIHAANAWIQNAQRDGRSLRASDVDDLYDACVKSSFRTFVKPTKNPTLTSFCNELTGITQEQVDSGIPLPEAIAAYQSWLVSNNLADATTGTDAVRVHADAVFVTCGDWDFGTCLSCECRKKGIPLPPWATSWLNIKKAFQAVTGTRAYGLGHMVGAFGLQFSGRQHSGIDDCRNIARVALCMLMLKGHRF* # ORIGINAL: g3175.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 3351 4873 . - . ID=g3175;Name=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 3351 4873 . - . ID=g3175.t1;Parent=g3175;Name=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 4820 4873 . - . ID=g3175.t1.exon1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 4820 4873 . - 0 ID=cds.g3175.t1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 4609 4677 . - . ID=g3175.t1.exon2;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 4609 4677 . - 0 ID=cds.g3175.t1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 4358 4472 . - . ID=g3175.t1.exon3;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 4358 4472 . - 0 ID=cds.g3175.t1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 4101 4201 . - . ID=g3175.t1.exon4;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 4101 4201 . - 2 ID=cds.g3175.t1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 3862 3940 . - . ID=g3175.t1.exon5;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 3862 3940 . - 0 ID=cds.g3175.t1;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 3351 3493 . - . ID=g3175.t1.exon6;Parent=g3175.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 3351 3493 . - 2 ID=cds.g3175.t1;Parent=g3175.t1 #PROT g3175.t1 g3175 MLLCIYECGVCFADLMLVGPAALEAREAGADFVGGQDLITQIAEDKKPEYDKFLTVPDMLPQLKQIASILREDMPTQKKGTVSHEIGALVKKFKNGIQFKTDKSGMAKLSIGKLSMTNDELIANINQVLADIDSFRKSFKRFILSISIKAAQGPMFPVQHDIMKTTAQKKKKAAAIAAAAELEAQA* # ORIGINAL: g3178.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 6883 9623 . - . ID=g3178;Name=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 6883 9623 . - . ID=g3178.t1;Parent=g3178;Name=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 9503 9623 . - . ID=g3178.t1.exon1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 9503 9623 . - 0 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 9084 9190 . - . ID=g3178.t1.exon2;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 9084 9190 . - 2 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 8763 8883 . - . ID=g3178.t1.exon3;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 8763 8883 . - 0 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 8315 8380 . - . ID=g3178.t1.exon4;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 8315 8380 . - 2 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 8110 8166 . - . ID=g3178.t1.exon5;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 8110 8166 . - 2 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 7797 7927 . - . ID=g3178.t1.exon6;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 7797 7927 . - 2 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 7478 7635 . - . ID=g3178.t1.exon7;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 7478 7635 . - 0 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 7170 7216 . - . ID=g3178.t1.exon8;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 7170 7216 . - 1 ID=cds.g3178.t1;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 6883 6980 . - . ID=g3178.t1.exon9;Parent=g3178.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 6883 6980 . - 2 ID=cds.g3178.t1;Parent=g3178.t1 #PROT g3178.t1 g3178 MAEAPPMDASGAQGDADRRHYEAEKAAAAEEWAAVEQRQNEREIAPGASVDKGESALVSFADAVEHFRTQDMSEYSKNVPPPAKPGLLARLLPFLGPPKLSPSLASDRDLIFAIAKCPFDNNSEMHNRMLQTIYKRLTGSAFDCPRYGNHWEIIGFQGQDPSTDLRAMGMLGLLTLLFFVDEVASRKVALKIYQLSRDERQNFPFCTLSVNVTRMAVTQLKAGKLNKELNAAKSVATPFGEAYAGIYYSIYIVWKNQQKTIKDSGFVLKDAEANAGKSMPALMRQLRTAVARERLPDDVTA* # PASA_UPDATE: g3184.t1, single gene model update, valid-1, status:[pasa:asmbl_5847,status:12], valid-1 NODE_328_length_26865_cov_40.7619 . gene 22509 26779 . - . ID=g3184;Name=g3184.t1 NODE_328_length_26865_cov_40.7619 . mRNA 22509 26779 . - . ID=g3184.t1;Parent=g3184;Name=g3184.t1 NODE_328_length_26865_cov_40.7619 . five_prime_UTR 26654 26779 . - . ID=g3184.t1.utr5p1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . five_prime_UTR 26245 26263 . - . ID=g3184.t1.utr5p2;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 26654 26779 . - . ID=g3184.t1.exon1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 26223 26263 . - . ID=g3184.t1.exon2;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 26223 26244 . - 0 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 25823 25937 . - . ID=g3184.t1.exon3;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 25823 25937 . - 2 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 25441 25540 . - . ID=g3184.t1.exon4;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 25441 25540 . - 1 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 25067 25171 . - . ID=g3184.t1.exon5;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 25067 25171 . - 0 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 24583 24763 . - . ID=g3184.t1.exon6;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 24583 24763 . - 0 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 23983 24333 . - . ID=g3184.t1.exon7;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 23983 24333 . - 2 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 23622 23720 . - . ID=g3184.t1.exon8;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 23622 23720 . - 2 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 23314 23485 . - . ID=g3184.t1.exon9;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 23314 23485 . - 2 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . exon 22509 22949 . - . ID=g3184.t1.exon10;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . CDS 22574 22949 . - 1 ID=cds.g3184.t1;Parent=g3184.t1 NODE_328_length_26865_cov_40.7619 . three_prime_UTR 22509 22573 . - . ID=g3184.t1.utr3p1;Parent=g3184.t1 #PROT g3184.t1 g3184 MDRNELLGMLPGVPTHLEAADVSDFCDLAKYISQTTPYSVRMIYFRSIFADVLSPPPPPSLCLLVSTNELMHQCTVTPKQKRPGTIKYTVIDCRPAEQLQGGKFPVSISLDARMMMNDPEEFVRTVASFDRFAGDHLCFFGSGREDDDAIMGMVVSHFLQRRTKCVSIAAGGYEGYHSAMKGNLGDILDHDASMCTVCTPPIPIEDSPFGTTAQQRSTQQSSQQLQQPQQQQQQQQQGVSAPPAQPTANGERNERLSSFGSKLGMFSSLLKEKSATMAEELGAKLRKLSTDESTTQYRARDVQASANKSSQPVFSIGGDDDDDEEGRHGQSARRGPSELPNEDVEDVQSMPLVGLEDYAFDNGGIAIYACNEITRSGYMLASHLLVTGSKLVRFRGHAEDSTKGYVKDATDILAITRITAKKKHPNLITFAYKTDAAGNADADGQQLGAMRFLIPDARACTKTVTEQILKRRQVQSSSHGTNSPSVSSQQGEVSASDGTATPPPTE* # ORIGINAL: g3174.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 1564 2698 . + . ID=g3174;Name=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 1564 2698 . + . ID=g3174.t1;Parent=g3174;Name=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 1564 1717 . + . ID=g3174.t1.exon1;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 1564 1717 . + 0 ID=cds.g3174.t1;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 1993 2080 . + . ID=g3174.t1.exon2;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 1993 2080 . + 2 ID=cds.g3174.t1;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 2368 2477 . + . ID=g3174.t1.exon3;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 2368 2477 . + 1 ID=cds.g3174.t1;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 2634 2698 . + . ID=g3174.t1.exon4;Parent=g3174.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 2634 2698 . + 2 ID=cds.g3174.t1;Parent=g3174.t1 #PROT g3174.t1 g3174 MRHAEFEAIDEVLALCAARPTEFDRSSIFPSLDLFVTVEPCIMCAAALRYIGIQRVYFGCGNERFGGCGSVLSVATDAWQDDPRGRSVPPSLSCLSGIQKERAIDLLRDFYRHENPNAPIGKRKEKPLTRGCAGNAPS* # ORIGINAL: g3182.t1 original gene structure, not modified by PASA NODE_328_length_26865_cov_40.7619 AUGUSTUS gene 14398 17575 . + . ID=g3182;Name=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS mRNA 14398 17575 . + . ID=g3182.t1;Parent=g3182;Name=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 14398 14526 . + . ID=g3182.t1.exon1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 14398 14526 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 14721 14978 . + . ID=g3182.t1.exon2;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 14721 14978 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 15281 15414 . + . ID=g3182.t1.exon3;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 15281 15414 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 15862 16009 . + . ID=g3182.t1.exon4;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 15862 16009 . + 1 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 16367 16507 . + . ID=g3182.t1.exon5;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 16367 16507 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 17116 17244 . + . ID=g3182.t1.exon6;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 17116 17244 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS exon 17480 17575 . + . ID=g3182.t1.exon7;Parent=g3182.t1 NODE_328_length_26865_cov_40.7619 AUGUSTUS CDS 17480 17575 . + 0 ID=cds.g3182.t1;Parent=g3182.t1 #PROT g3182.t1 g3182 MQHPELLLATYNANPDTPHEPDGVALMWNMHLKERPEFYFTSQSSVLSACMAEFHPSIVVGGTYCGQVVLWDMRAKHTPVQRTPLTAEAHTHPVYCVEIVGTQNAHNLVSVSNDGRLCSWSLDMLGQPQESIHLQLSDTKPVSVTSISFPDGEISNFVAGAEDGNLYHACRHGKKSGILSTLSGHSGHVTAVDFHPANASGAEFSDVFLSSSVDWSVKLWGMKGTEAIHTFDAYGDYVFDVQWSPVHPLLFATADGLGKIDVWNIGASVELPIISVQVENGSSPLNKLRWSRDGMRISVGDADGRVHVFALGEHVAIPRSDDMNKLRDTIQEMRASQKPAEVTR* # PASA_UPDATE: g3177.t1, single gene model update, valid-1, status:[pasa:asmbl_5843,status:12], valid-1 NODE_328_length_26865_cov_40.7619 . gene 5956 6707 . + . ID=g3177;Name=g3177.t1 NODE_328_length_26865_cov_40.7619 . mRNA 5956 6707 . + . ID=g3177.t1;Parent=g3177;Name=g3177.t1 NODE_328_length_26865_cov_40.7619 . five_prime_UTR 5956 6000 . + . ID=g3177.t1.utr5p1;Parent=g3177.t1 NODE_328_length_26865_cov_40.7619 . exon 5956 6707 . + . ID=g3177.t1.exon1;Parent=g3177.t1 NODE_328_length_26865_cov_40.7619 . CDS 6001 6435 . + 0 ID=cds.g3177.t1;Parent=g3177.t1 NODE_328_length_26865_cov_40.7619 . three_prime_UTR 6436 6707 . + . ID=g3177.t1.utr3p1;Parent=g3177.t1 #PROT g3177.t1 g3177 MIGIAFCNSDSARQKHAARGSDTLRHTHSPIAERSTQMLRTPMMDAANAHNFGGQTDAAIDSLHLQLWPSTRQPSRWAPVDAAWGARPHGRHVTQGGSQHPTHLPLQHGHVNRFRDVIGAAEASEDESAGADKENCPEDAYYQR* # ORIGINAL: g13135.t1 original gene structure, not modified by PASA NODE_1018_length_14642_cov_50.1642 AUGUSTUS gene 434 1588 . + . ID=g13135;Name=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS mRNA 434 1588 . + . ID=g13135.t1;Parent=g13135;Name=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 434 496 . + . ID=g13135.t1.exon1;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 434 496 . + 0 ID=cds.g13135.t1;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 734 841 . + . ID=g13135.t1.exon2;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 734 841 . + 0 ID=cds.g13135.t1;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 1022 1088 . + . ID=g13135.t1.exon3;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 1022 1088 . + 0 ID=cds.g13135.t1;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 1488 1588 . + . ID=g13135.t1.exon4;Parent=g13135.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 1488 1588 . + 2 ID=cds.g13135.t1;Parent=g13135.t1 #PROT g13135.t1 g13135 IVDEVIRTEAVLIGNQHSKCKDLIEILRKRIAGSITADKFVMIEYNIPRAKLQDAIRVTPGKVSPTLSPLEDPEWIAVKCMLLKAEANAKMDQLEAIGASDILIFNIHNCRV* # ORIGINAL: g13140.t1 original gene structure, not modified by PASA NODE_1018_length_14642_cov_50.1642 AUGUSTUS gene 13324 13962 . + . ID=g13140;Name=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS mRNA 13324 13962 . + . ID=g13140.t1;Parent=g13140;Name=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 13324 13449 . + . ID=g13140.t1.exon1;Parent=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 13324 13449 . + 0 ID=cds.g13140.t1;Parent=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 13546 13642 . + . ID=g13140.t1.exon2;Parent=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 13546 13642 . + 0 ID=cds.g13140.t1;Parent=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 13826 13962 . + . ID=g13140.t1.exon3;Parent=g13140.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 13826 13962 . + 2 ID=cds.g13140.t1;Parent=g13140.t1 #PROT g13140.t1 g13140 MGPTLADAQSVPASGADGPLIPPFRFAIVEDGLYRGAYPTPKNFRYLKRLRLRTMLSLVPKLPTREVLDFCEAEGIRNMHIFVERFKENVTVSPGKARDSPINVAHLLPVSLFPQSSCA* # PASA_UPDATE: g13137.t1, single gene model update, valid-1, status:[pasa:asmbl_59,status:3], valid-1 NODE_1018_length_14642_cov_50.1642 . gene 3781 5892 . + . ID=g13137;Name=g13137.t1 NODE_1018_length_14642_cov_50.1642 . mRNA 3781 5892 . + . ID=g13137.t1;Parent=g13137;Name=g13137.t1 NODE_1018_length_14642_cov_50.1642 . five_prime_UTR 3781 4036 . + . ID=g13137.t1.utr5p1;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . exon 3781 4177 . + . ID=g13137.t1.exon1;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . CDS 4037 4177 . + 0 ID=cds.g13137.t1;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . exon 4312 4463 . + . ID=g13137.t1.exon2;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . CDS 4312 4463 . + 0 ID=cds.g13137.t1;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . exon 4686 5892 . + . ID=g13137.t1.exon3;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . CDS 4686 5685 . + 1 ID=cds.g13137.t1;Parent=g13137.t1 NODE_1018_length_14642_cov_50.1642 . three_prime_UTR 5686 5892 . + . ID=g13137.t1.utr3p1;Parent=g13137.t1 #PROT g13137.t1 g13137 MEQRKLGADAVAPGVHAHADPSYDVRLLREAELEAWYDHLEDAFAEKGTPRVYFKRHWDNDPHRTAKGICVAVDCSSGAIVSTVRVFVRYMMCAAVDGSLVAVPVGGIGEVSTRRAHRGRGLAARLMERAGACMRAMGLPLALLHTGNPATAAYYRALGWTPLPVPMATAVVDVASLKTHEVIVRRVSFGDGGVHAATDGADAADAIELHTSLLRGRVGGPLGFIRRSEDYWRRWVAADIEAKASWAGVAYVECATHSPDACASRIRPVAYGIFWPRLGGDSAVAVRCHEFVCAEGTCGSVRTAAFASLVRSCIEDSVGWSCAGGATDGEHPPGADPGVCSVTLSGCAAFVADVFASLGCQVRTEDDDGWLCKVVDPPALLRVLGCTHEPDKDAATAAFAALARAVGMHGEGKGEGSSPPRRCFFGLDSF* # ORIGINAL: g13139.t1 original gene structure, not modified by PASA NODE_1018_length_14642_cov_50.1642 AUGUSTUS gene 8974 12722 . - . ID=g13139;Name=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS mRNA 8974 12722 . - . ID=g13139.t1;Parent=g13139;Name=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 12645 12722 . - . ID=g13139.t1.exon1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 12645 12722 . - 0 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 12337 12418 . - . ID=g13139.t1.exon2;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 12337 12418 . - 0 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 11996 12043 . - . ID=g13139.t1.exon3;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 11996 12043 . - 2 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 11716 11846 . - . ID=g13139.t1.exon4;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 11716 11846 . - 2 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 11350 11474 . - . ID=g13139.t1.exon5;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 11350 11474 . - 0 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 10862 11111 . - . ID=g13139.t1.exon6;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 10862 11111 . - 1 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 10376 10519 . - . ID=g13139.t1.exon7;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 10376 10519 . - 0 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 9946 10141 . - . ID=g13139.t1.exon8;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 9946 10141 . - 0 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 9606 9786 . - . ID=g13139.t1.exon9;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 9606 9786 . - 2 ID=cds.g13139.t1;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS exon 8974 9262 . - . ID=g13139.t1.exon10;Parent=g13139.t1 NODE_1018_length_14642_cov_50.1642 AUGUSTUS CDS 8974 9262 . - 1 ID=cds.g13139.t1;Parent=g13139.t1 #PROT g13139.t1 g13139 MEWMRLQPRRYTQNGLETYGQKGMDLVSALADLARGLGPYIGTVYVAALVHAHGFAVDEIIGRIGGLLSASSTPLLLAALVFCIAASARAAGRAKSADYRAFYSLYSKGSPAMTHTFDLQKSILSSQYDYDFGAMPITFESKTLHNPVTPRPSMSIGPLATPAWLVRRWIAHVIARRVMYPGSTSMIRRMLWAPLLEGRMQLVALEGARRGRLRTALGCDIDCVFMDRRGAGQRGRKLVIACEGNCSFYEMTVGSVAHKVGYSVVGWNRPGFGWSTGAPMQPEEEAAVDVVVQYALSLGFAPADIMLYGWSIGGYSAALAAKRYPQIGALVLDASFDDVVHLALARMPPPLEGLVRQVIGEHLALSPALLVESYAGPVLVFRRTQDEMIATAYGVLASNRGNFLLRHLLTHRYPNMVHQPTLDAMLDDPDCRLAPETTDDAAFCRRHIAAAVAMDTSPPHSYGSALSTDDRKRLTAFLVRRHLVDVHSSHCVELPVALWREPWRITD* # PASA_UPDATE: g13136.t1, single gene model update, valid-1, status:[pasa:asmbl_62,status:12], valid-1 NODE_1018_length_14642_cov_50.1642 . gene 1774 3545 . - . ID=g13136;Name=g13136.t1 NODE_1018_length_14642_cov_50.1642 . mRNA 1774 3545 . - . ID=g13136.t1;Parent=g13136;Name=g13136.t1 NODE_1018_length_14642_cov_50.1642 . five_prime_UTR 3527 3545 . - . ID=g13136.t1.utr5p1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . exon 3393 3545 . - . ID=g13136.t1.exon1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . CDS 3393 3526 . - 0 ID=cds.g13136.t1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . exon 3031 3211 . - . ID=g13136.t1.exon2;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . CDS 3031 3211 . - 1 ID=cds.g13136.t1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . exon 2653 2775 . - . ID=g13136.t1.exon3;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . CDS 2653 2775 . - 0 ID=cds.g13136.t1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . exon 1774 2378 . - . ID=g13136.t1.exon4;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . CDS 1959 2378 . - 0 ID=cds.g13136.t1;Parent=g13136.t1 NODE_1018_length_14642_cov_50.1642 . three_prime_UTR 1774 1958 . - . ID=g13136.t1.utr3p1;Parent=g13136.t1 #PROT g13136.t1 g13136 MAAFDQAALASVVDWTEGPVDATRTVRFGLGDDAVSAFYLPDATREPFRGGGFVGSVHHGGSCNCDIVTLCPHGNGTHTEGVGHIDALRQSVLSLLNLGEVSLMPCTVVTVALVRLVDCGEAEGPREQPDDLVISAAGVRAAVDAVLAAGTVPPTATSLNWTHSLFVRTRYPSTPDGQQGPPTLKLSGTNPPYPTRACARLMASLASHVILDTPSFDREDDGGSLSNHRAFWHSPARVTCSVTELADSYAPGLHDGRHALSLHLAPLELDAVPSRVVLWRTRAAA* # PASA_UPDATE: g13138.t1, single gene model update, valid-1, status:[pasa:asmbl_60,status:3], valid-1 NODE_1018_length_14642_cov_50.1642 . gene 6943 8898 . + . ID=g13138;Name=g13138.t1 NODE_1018_length_14642_cov_50.1642 . mRNA 6943 8898 . + . ID=g13138.t1;Parent=g13138;Name=g13138.t1 NODE_1018_length_14642_cov_50.1642 . five_prime_UTR 6943 7067 . + . ID=g13138.t1.utr5p1;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . exon 6943 7176 . + . ID=g13138.t1.exon1;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . CDS 7068 7176 . + 0 ID=cds.g13138.t1;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . exon 7391 7614 . + . ID=g13138.t1.exon2;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . CDS 7391 7614 . + 2 ID=cds.g13138.t1;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . exon 7886 8898 . + . ID=g13138.t1.exon3;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . CDS 7886 8659 . + 0 ID=cds.g13138.t1;Parent=g13138.t1 NODE_1018_length_14642_cov_50.1642 . three_prime_UTR 8660 8898 . + . ID=g13138.t1.utr3p1;Parent=g13138.t1 #PROT g13138.t1 g13138 MSASSVSRLFTPVTIRGVTLRNRIGVSPMCQYSAAEDGKANDWHYAHLVARSIGAGIVIVEATGVEPRGRISPGDTGLWEDAQIAPWKRIVDACKANGAKMGIQLAHAGRKASARKPWDGDDHIMTEAEGGWQTVAPSPLPFGDNLGKVPHELTIPEIKQIIAKFVDATVRADKAGFDLVELHAAHGYLLHEFYSPLTNKRTDDYGGSFENRTRLVVETARAMRDVWGSDRPLAVRLSCSDWVDGGWTADDTVRLSARLRAEADVDIVDCSSGFNTPDYRAIPFGPCFQVPFAERVRKEAGVLTAAVGVITTAQEAEDIVASGKADIVLLARAYLRDPHWAYTAAVELNYAGARELLPVQYQRAHVRK* # PASA_UPDATE: g1583.t1, single gene model update, valid-1, status:[pasa:asmbl_4671,status:12], valid-1 NODE_2620_length_5644_cov_38.0415 . gene 4071 5487 . + . ID=g1583;Name=g1583.t1 NODE_2620_length_5644_cov_38.0415 . mRNA 4071 5487 . + . ID=g1583.t1;Parent=g1583;Name=g1583.t1 NODE_2620_length_5644_cov_38.0415 . five_prime_UTR 4071 4127 . + . ID=g1583.t1.utr5p1;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . five_prime_UTR 4216 4333 . + . ID=g1583.t1.utr5p2;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . exon 4071 4127 . + . ID=g1583.t1.exon1;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . exon 4216 4426 . + . ID=g1583.t1.exon2;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . CDS 4334 4426 . + 0 ID=cds.g1583.t1;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . exon 4640 4800 . + . ID=g1583.t1.exon3;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . CDS 4640 4800 . + 0 ID=cds.g1583.t1;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . exon 4967 5126 . + . ID=g1583.t1.exon4;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . CDS 4967 5126 . + 1 ID=cds.g1583.t1;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . exon 5350 5487 . + . ID=g1583.t1.exon5;Parent=g1583.t1 NODE_2620_length_5644_cov_38.0415 . CDS 5350 5487 . + 0 ID=cds.g1583.t1;Parent=g1583.t1 #PROT g1583.t1 g1583 MFRNQYDNDITTWSPQGRIHQIEYAMEAVKQGSCSVGLKSKEYAVIVAVKRTSSELSAHQKKLFRIDDHIGIGIAGLTSDARVLSKFMRTECLNSKYVFNELLPVARLVASIGDKSQVTTQRWGRRPFGVGLLIAGYDDQGPHIYQTCPSSNYFDCKAMAIGARSQSAKTYLERNLAKFADGM* # PASA_UPDATE: g1582.t1, single gene model update, valid-1, status:[pasa:asmbl_4670,status:12], valid-1 NODE_2620_length_5644_cov_38.0415 . gene 57 3649 . - . ID=g1582;Name=g1582.t1 NODE_2620_length_5644_cov_38.0415 . mRNA 57 3649 . - . ID=g1582.t1;Parent=g1582;Name=g1582.t1 NODE_2620_length_5644_cov_38.0415 . five_prime_UTR 3526 3649 . - . ID=g1582.t1.utr5p1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 3432 3649 . - . ID=g1582.t1.exon1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 3432 3525 . - 0 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 2907 3214 . - . ID=g1582.t1.exon2;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 2907 3214 . - 2 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 2540 2620 . - . ID=g1582.t1.exon3;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 2540 2620 . - 0 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 2261 2345 . - . ID=g1582.t1.exon4;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 2261 2345 . - 0 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 1085 1969 . - . ID=g1582.t1.exon5;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 1085 1969 . - 2 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 771 874 . - . ID=g1582.t1.exon6;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 771 874 . - 2 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 415 498 . - . ID=g1582.t1.exon7;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 415 498 . - 0 ID=cds.g1582.t1;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . exon 57 217 . - . ID=g1582.t1.exon8;Parent=g1582.t1 NODE_2620_length_5644_cov_38.0415 . CDS 57 217 . - 0 ID=cds.g1582.t1;Parent=g1582.t1;3_prime_partial=true #PROT g1582.t1 g1582 MLRAATVVARASIVRHGVQHGARHETLIVMGAVSSFATEAATASPLPTESAGQDDAFLVATRLTKKLLNKEALSAAPSTAKSAAAGTTEEGEEYSLRDSETLMESKAFDENIEGKEDTVDMILALGTARRRIDMLEIVKLAKRASKRRYTSGKADFLEENKLGMDGQTLVSIMQMARPAKRIHDRIRRFEYNFPEDAEDRIGTLGRKSADIARRYEQIGPEVLLHGQPVDDNIEKFDFLSVPLGFQPEVLKPFEATHHAIASLINKLRPDAMSSDFIFQEIRRSAGDIGAVMHKFNGWVASKTPLTAAHGEALLKALATKNPDPERSRGEFGSEASAIVSHFVAVEKARRAPTDAPTAAPGVSAGVESTAAVTPDAQTTTAAAATATPAASVAEGNASVPTSGAPLVTVQMVDTALHAMRTSRRLAPNAVSTLFEDARSLGIVPGHVDSYIAVVRAIQRGDAKGTEKVLGYLKMASEAGIAPTIELFGAAVTQIMMDDSENSLRVALQVLGEMKVAGIEPDLRVHGEILHYLMRNRMHEECVSLFQEVLQSNPTLDVATGTNFFTAMIKVASRISDFEVADRAIGEAVRLAGTTPLPASV # PASA_UPDATE: g10267.t1, single gene model update, valid-1, status:[pasa:asmbl_4207,status:12],[pasa:asmbl_4208,status:12],[pasa:asmbl_4209,status:12], valid-1 NODE_2392_length_6440_cov_35.8542 . gene 526 6282 . + . ID=g10267;Name=g10267.t1 NODE_2392_length_6440_cov_35.8542 . mRNA 526 6282 . + . ID=g10267.t1;Parent=g10267;Name=g10267.t1 NODE_2392_length_6440_cov_35.8542 . five_prime_UTR 526 535 . + . ID=g10267.t1.utr5p1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 526 672 . + . ID=g10267.t1.exon1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 536 672 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 904 1047 . + . ID=g10267.t1.exon2;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 904 1047 . + 1 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 1237 1351 . + . ID=g10267.t1.exon3;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 1237 1351 . + 1 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 1538 1607 . + . ID=g10267.t1.exon4;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 1538 1607 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 1818 2413 . + . ID=g10267.t1.exon5;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 1818 2413 . + 2 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 2713 2847 . + . ID=g10267.t1.exon6;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 2713 2847 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 3172 3267 . + . ID=g10267.t1.exon7;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 3172 3267 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 3450 3604 . + . ID=g10267.t1.exon8;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 3450 3604 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 3751 3910 . + . ID=g10267.t1.exon9;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 3751 3910 . + 1 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 4131 4306 . + . ID=g10267.t1.exon10;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 4131 4306 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 4472 4592 . + . ID=g10267.t1.exon11;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 4472 4592 . + 1 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 4913 5030 . + . ID=g10267.t1.exon12;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 4913 5030 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 5318 5376 . + . ID=g10267.t1.exon13;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 5318 5376 . + 2 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 5643 5780 . + . ID=g10267.t1.exon14;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 5643 5780 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . exon 6091 6282 . + . ID=g10267.t1.exon15;Parent=g10267.t1 NODE_2392_length_6440_cov_35.8542 . CDS 6091 6282 . + 0 ID=cds.g10267.t1;Parent=g10267.t1 #PROT g10267.t1 g10267 MKWNRRFSVPIILASFGGAGGMLVKYSKWADREDPDGYFFYAASFGYHANVWLPGARENIVKQFGIKVNRKAYFLGMVFGDRHFGNETILKVTNPGTVAGEDEATGAGAPTTEFSVNFMKQCHPKKPKKAFKDLKVPFAVIYAIDDEICDSEKLLAIVGENHPPNRVVKGLPTTHFELSRLSMPELVAFVEAAYPDAHTLPVNVNEVHQVCFFLIFSPWQPSSPLSVWLSLALCSSRSSGVRGQCDGDRPSVAVLQTLGLPNPMWLWANPTWALKRNAMLNTRLNPMLDPNPNPFCRVSVIVCLLYVFAFLDIWWHISICCPYKAVDEHGRVSRELSAEDLRHASGESLANIANSKSNTLDVPRHSSTATEDDFIVDPTPLLEAMSSIGELETRFVEGRDGEKLAFYTFATPENRPRKANAILIMGRAWMQVLADRLRTEFDIGAYILDPRGVGLSGGKRGDAKSPEHLWSDVRTMVRFVRTRYPGIPLVLVAWGRHGGLLLNYVSWKESTHVDGLAFLATGFSASIDTLKMETLSRMGAKLNTFDMAMSKLSGGLFRSHGATYRLSKAYTEQIKATLDPLFVSHGSAMYILAHQVDHAVDVIRGLDIPFCYVVGENDEFVIGSKVREILESNEQVHATRRKIRILPRVRHLELLVKAHVEVGQFIESIANTYAVSENLPKLTNPKLNDFEKIKLIGRGAFAEVSLVRHKETGTYLALKAMSKRRVVELENVGHVMEEKEVLKTLSYPFVVKMAGAFQDERSLYFVLEFVIGGELFTLLKMSHKFPEAMVGSASNRALASFCP* # PASA_UPDATE: g3187.t1, single gene model update, valid-1, status:[pasa:asmbl_4828,status:12], valid-1 NODE_2698_length_5415_cov_37.4199 . gene 599 5135 . - . ID=g3187;Name=g3187.t1 NODE_2698_length_5415_cov_37.4199 . mRNA 599 5135 . - . ID=g3187.t1;Parent=g3187;Name=g3187.t1 NODE_2698_length_5415_cov_37.4199 . five_prime_UTR 5002 5135 . - . ID=g3187.t1.utr5p1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . five_prime_UTR 4622 4719 . - . ID=g3187.t1.utr5p2;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 5002 5135 . - . ID=g3187.t1.exon1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 4544 4719 . - . ID=g3187.t1.exon2;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 4544 4621 . - 0 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 3986 4116 . - . ID=g3187.t1.exon3;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 3986 4116 . - 0 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 3364 3772 . - . ID=g3187.t1.exon4;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 3364 3772 . - 1 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 2873 3054 . - . ID=g3187.t1.exon5;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 2873 3054 . - 0 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 2618 2653 . - . ID=g3187.t1.exon6;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 2618 2653 . - 1 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 2058 2206 . - . ID=g3187.t1.exon7;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 2058 2206 . - 1 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 1522 1604 . - . ID=g3187.t1.exon8;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 1522 1604 . - 2 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . exon 599 1206 . - . ID=g3187.t1.exon9;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . CDS 880 1206 . - 0 ID=cds.g3187.t1;Parent=g3187.t1 NODE_2698_length_5415_cov_37.4199 . three_prime_UTR 599 879 . - . ID=g3187.t1.utr3p1;Parent=g3187.t1 #PROT g3187.t1 g3187 MYDMRKRALNWVIDYTEITLIEKIGEGSFGEVYRGMFRGTEVAIKRVKWTGFIQANLASNSSAKIMKLVRGQDARRGSQGSLGMIHDMVMDVSKSGKQVKASADDLGSVNRSSSSHSVLTTGGVGTATNFVSVGGAAPTTDVADRIVSAYASSIQAERMSSISHATHVTRGRQVKEKSVARTMIQDFEHEIATMTALRHPNIVMFMGACLDVANMCIVTELCLHGSLAEYLAGKNRAIPWHQRMSFALDSARGMTYLHSHRPPILHRDLKSPNLLLDNAFRIKITDFGLAQVKDVRSVTEKLTGSILWIAPEVFQLQIYNESADAYSFGIILCEIVSRMLPYADSTQTSMGALVAQIAIQGLRPTLPPSLPTQLRDLINRSVSAEPRDRPLFPELMDILGNMDTSSWADPVDPSGYTTYDSFTNTVNRSLDGEEQRMFVTKPPPSLPMAEAGTTVQDDMADFDL* # ORIGINAL: g8009.t1 original gene structure, not modified by PASA NODE_1841_length_8968_cov_40.8804 AUGUSTUS gene 74 7388 . - . ID=g8009;Name=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS mRNA 74 7388 . - . ID=g8009.t1;Parent=g8009;Name=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 7297 7388 . - . ID=g8009.t1.exon1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 7297 7388 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 6985 7183 . - . ID=g8009.t1.exon2;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 6985 7183 . - 1 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 6750 6870 . - . ID=g8009.t1.exon3;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 6750 6870 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 6489 6625 . - . ID=g8009.t1.exon4;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 6489 6625 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 6253 6327 . - . ID=g8009.t1.exon5;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 6253 6327 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 6006 6158 . - . ID=g8009.t1.exon6;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 6006 6158 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 5646 5832 . - . ID=g8009.t1.exon7;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 5646 5832 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 5356 5472 . - . ID=g8009.t1.exon8;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 5356 5472 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 5064 5240 . - . ID=g8009.t1.exon9;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 5064 5240 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 4764 4900 . - . ID=g8009.t1.exon10;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 4764 4900 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 4419 4499 . - . ID=g8009.t1.exon11;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 4419 4499 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 4188 4283 . - . ID=g8009.t1.exon12;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 4188 4283 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 3941 4057 . - . ID=g8009.t1.exon13;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 3941 4057 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 3623 3708 . - . ID=g8009.t1.exon14;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 3623 3708 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 3177 3261 . - . ID=g8009.t1.exon15;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 3177 3261 . - 1 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 2917 3034 . - . ID=g8009.t1.exon16;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 2917 3034 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 2748 2833 . - . ID=g8009.t1.exon17;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 2748 2833 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 2382 2543 . - . ID=g8009.t1.exon18;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 2382 2543 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 1983 2178 . - . ID=g8009.t1.exon19;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 1983 2178 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 1355 1797 . - . ID=g8009.t1.exon20;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 1355 1797 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 1023 1227 . - . ID=g8009.t1.exon21;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 1023 1227 . - 0 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 497 719 . - . ID=g8009.t1.exon22;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 497 719 . - 2 ID=cds.g8009.t1;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS exon 74 305 . - . ID=g8009.t1.exon23;Parent=g8009.t1 NODE_1841_length_8968_cov_40.8804 AUGUSTUS CDS 74 305 . - 1 ID=cds.g8009.t1;Parent=g8009.t1 #PROT g8009.t1 g8009 MQRLESLAKLLRLTPLVAFTGALHEANNYKIVDGRNKAPAPVPPPTVRSMLPTIDGPAGFNDDDWSPVVTEEDYQALLAERRRAKKQARDCANESRKLHKYRTYSARLIDPHYVHDDLRLRSKKSRRGADLSVEAGSAPAKRARLSAADTAAEDGQSAALEEQAAWTRELPFSQAHLVSAGRAEATRKKAGDQHRKLWATIAKRDMPKAVKYVTANRAYLQALAKRTAQIVQKEVRRDYQATAKAIREAPARGKRMMREMLVFWKRYEKEERELQKRAEKEALERRRQEEERREARRQQRKLNFLITQTELYAHFMGKKLKGASGNLQDAETDQILGRIADSGATNGLTTKSSDAHDDDEDDETLRRRALENAETALSAMAERTREFDANAMRLRAEAEGGAAAAHAKKDGHMPITQEKFDETLSLANPSTMQGIADLPQPSMFRGNLKSYQLKGMSWLVSLYEQGINGILADEMGLGKTVQSISFLSHLAESMDIWGPFLIVSPASTLHNWQQEFEKFTTEFKVLPYWGNLNDRKILRKYWNQKKLYSRDAPFHVLITSYQLVVSDEKYFQRIRWQYMILDEAQALKSSASVRWKTLLNFNCRNRLLLTGTPIQNSMAELWALLHFIMPSLFDSHEEFNEWFSKDIENHAEKKSGLDQNQLTRLHMILKPFMLRRIKKDVENELAEKIELEVMCELTPRQRHLYQGVRDKISIDDLFETTLGSANDKEVVHLMNLVMQFRKVCNHPDLFERWDILSPVMLASPLKRWGEHRHHHGRDAARGAFSYDVSSERRAMFSYAVPKAIYRELMADLLSPPKRLLATCFSVTHPSTVASESLPGAWSCARLCGLSPAEVHAAATGGIGVQWHVITCTANALRRKVVRGILQTAIGADGDDTRNPPDARDAPMPLGIIATRQLVLAHAAVHLALPAASELVLGLRSFAGRTAQVFSCATPKAIAWPIEAVCHDRSCEYEQSALRSAVGDAWGGVRNVLWGTPTVDAARDTGGLFGALDPPGGWSYIRLPDKEKLVTDSGKLRVLDALLRRLKAEGHRVLIYSQMTKMIDILEEYMMLRKHKYMRLDGSSKISDRRDMVTRFQTKTDIFAFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDEQAMDRAHRLGQTKQVTVYRLITRGTVEERILQRAKEKSE # ORIGINAL: g7578.t1 original gene structure, not modified by PASA NODE_2166_length_7439_cov_36.1359 AUGUSTUS gene 112 5346 . + . ID=g7578;Name=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS mRNA 112 5346 . + . ID=g7578.t1;Parent=g7578;Name=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 112 292 . + . ID=g7578.t1.exon1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 112 292 . + 0 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 452 558 . + . ID=g7578.t1.exon2;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 452 558 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 746 870 . + . ID=g7578.t1.exon3;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 746 870 . + 0 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 1173 1345 . + . ID=g7578.t1.exon4;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 1173 1345 . + 1 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 1735 1941 . + . ID=g7578.t1.exon5;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 1735 1941 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 2246 2353 . + . ID=g7578.t1.exon6;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 2246 2353 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 2553 2655 . + . ID=g7578.t1.exon7;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 2553 2655 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 3139 3272 . + . ID=g7578.t1.exon8;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 3139 3272 . + 1 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 3513 3587 . + . ID=g7578.t1.exon9;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 3513 3587 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 3793 3932 . + . ID=g7578.t1.exon10;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 3793 3932 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 4638 4779 . + . ID=g7578.t1.exon11;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 4638 4779 . + 0 ID=cds.g7578.t1;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 4982 5346 . + . ID=g7578.t1.exon12;Parent=g7578.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 4982 5346 . + 2 ID=cds.g7578.t1;Parent=g7578.t1 #PROT g7578.t1 g7578 MRLAARLIAVVPHVFGDESTDRSRAMLCGDHDDNALPPLAIPLFVANSSGGDADLIVASSERGVSVIGRWRLDTSAPIIHSAFADLPPHDETVTVKHRWVKGAHVTLSGSSRVASISQDGNGYVVVARGDGGIELRSAADLELVCRCDNDEPSEARDIVGDVYFPVDADALMGDGSVAQHQVAVPVDGDGDGDRPAKRIKLDPSAEDGRSFVKREAVSSMPLFCPPLSVVFSPSGYCVCTVDARGCLVASAPMRWPLKADWKDEADAYARDITWAAVRRVDPWDVVVAARVRASAVADSTAFFERISDGVLERVVGSKRGDLLDNSLAALGLLWRGVDGEEWRADDCWAWLFANAVLEIFRSSINPTEMADKSPVDVISAAVSSLKEYDAAIVDLTEKTYYVSYDGSRALSNYGEWVYSLVVMLSRSIGDQTNTETTAALHTSLRQSRRFGAVSLLRELALYQIIQSPFKSSDSPGYESVLVAKAMFGGLGAIQSALNGGSVPDGGLRAPFVAILSRPQFMIPDMQVDALRCRLNLLPRFPEGVLAHPFTADARSFRFRAQTCCSAAASKGKDSALTSVVESSGRMPTDADGGHSGSFVFDCVTQARLLSKTSTRQCTR* # ORIGINAL: g7579.t1 original gene structure, not modified by PASA NODE_2166_length_7439_cov_36.1359 AUGUSTUS gene 6664 7074 . + . ID=g7579;Name=g7579.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS mRNA 6664 7074 . + . ID=g7579.t1;Parent=g7579;Name=g7579.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS exon 6664 7074 . + . ID=g7579.t1.exon1;Parent=g7579.t1 NODE_2166_length_7439_cov_36.1359 AUGUSTUS CDS 6664 7074 . + 0 ID=cds.g7579.t1;Parent=g7579.t1 #PROT g7579.t1 g7579 MAYHSRSLTRAAAIQTGGSPRCQCAARSHFVSIAFSAVVATYLALSAFESAPLACDAAAASMSIVSQENMTSLYLSGTGKKLVLDPGLNGSVLISGTDFADLLRRVSALESKVASIQGKRLQLSTSVLSANVSRRP* # ORIGINAL: g1713.t1 original gene structure, not modified by PASA NODE_4696_length_1319_cov_35.758 AUGUSTUS gene 2 1319 . + . ID=g1713;Name=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS mRNA 2 1319 . + . ID=g1713.t1;Parent=g1713;Name=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS exon 2 253 . + . ID=g1713.t1.exon1;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS CDS 2 253 . + 2 ID=cds.g1713.t1;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS exon 361 447 . + . ID=g1713.t1.exon2;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS CDS 361 447 . + 2 ID=cds.g1713.t1;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS exon 878 1005 . + . ID=g1713.t1.exon3;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS CDS 878 1005 . + 2 ID=cds.g1713.t1;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS exon 1222 1319 . + . ID=g1713.t1.exon4;Parent=g1713.t1 NODE_4696_length_1319_cov_35.758 AUGUSTUS CDS 1222 1319 . + 0 ID=cds.g1713.t1;Parent=g1713.t1 #PROT g1713.t1 g1713 PPPGMGGPPPPPGMMGPRSNIIPLPQKATYNPSVQMKRINWTKLAPNKLEKTFWAKADERKWENLMELTALEEHFCAKKRRNEGEEDEEKPIGQANKPKEESVLDPKKAYNISIMLGRMKLDLEQLKADVLAMDETKFTEGVLLQFLKYIPTTEEKIALEKYVKNASVLSKADQFILEVRGVRARVC # PASA_UPDATE: g6968.t1, single gene model update, valid-1, status:[pasa:asmbl_4821,status:3], valid-1 NODE_2691_length_5439_cov_39.4416 . gene 783 5157 . - . ID=g6968;Name=g6968.t1 NODE_2691_length_5439_cov_39.4416 . mRNA 783 5157 . - . ID=g6968.t1;Parent=g6968;Name=g6968.t1 NODE_2691_length_5439_cov_39.4416 . five_prime_UTR 4965 5157 . - . ID=g6968.t1.utr5p1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 4875 5157 . - . ID=g6968.t1.exon1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 4875 4964 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 4077 4664 . - . ID=g6968.t1.exon2;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 4077 4664 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 3012 3704 . - . ID=g6968.t1.exon3;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 3012 3704 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 1646 2839 . - . ID=g6968.t1.exon4;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 1646 2839 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 1336 1431 . - . ID=g6968.t1.exon5;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 1336 1431 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . exon 783 1098 . - . ID=g6968.t1.exon6;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . CDS 988 1098 . - 0 ID=cds.g6968.t1;Parent=g6968.t1 NODE_2691_length_5439_cov_39.4416 . three_prime_UTR 783 987 . - . ID=g6968.t1.utr3p1;Parent=g6968.t1 #PROT g6968.t1 g6968 MTQLLKRWPWPSMPADDCVSIKAVKWKPLTVQTYKKGCEFLDLSIFDDAGLKHFVSITEKHQPIVITPQSQPFRVKMHVRINKPIPGPVYAVKAPSVRLARELVLTVAATGDLTDGILQFTPTGESFVHGDYYTECAKSGPSVLEDASLEHTHSEYVVELDRNELGDLAPTFVHQYFHLPSRMFAEYKKTGVLVARAFFYLMDGQGTAYQRVTHSFAVITHLSPMPTIYKYECIFKAARLLSQGKTMEEILGNCPLKRLLMARCMPNDPRNTRMCKMNTGDADVGFDRLKFLEMVERERKVSYCTASRPMWKSHFMAALAYRDANTAPHASNIVDLRRAAGESPDDEVTLCEEEPAPDMAAAAAVRMSGRSKASVVRSVLLDVASTKMLENELLENALGGGSGDVPLPACELRYVEAFDGVRLAFRVYEPQRSESSDARFVNAVLLGGLGTTTRRRELLGDSLRRYGVRSFVLDYRGHGGSGGVPGTAPTPDAFLRDVRSVVRHVSWNYPTESTVLVGHGLGANIAINYAQWGDRVPVNGYVFLSPLLPFAIRRDNRECRCVLLCRCARNMQLTADADSSASEMNSSSSLSSSSPKCSTERHSSHKIHFSYTLGARSSTSLASGSTPSHGAEATSPQSFGGPAPVRFGESMALGLLLRLNRISGGKIAGDAVALDVSKGLKKVEERVREVKETLRRHSVSVSATTSSPKLTPKLLQSAFHREPAGALERETDGSVRSKTSITDSTCGGSTCDAQSDATSLGGGSLSSANGGVGIGIGKGKAPADAVGTDGARTSKFAREGSDASDEGTDAAVHTPATVPAEVSTDGVLPPSVPKRLSINVVQSAIVRKSVTVFERIDRPFGLWVGEKDEFIATKMLFPAAERSVKSRCVETIPHADHLSILADADWYVGPFLKANFAMPTVAC* # ORIGINAL: g6967.t1 original gene structure, not modified by PASA NODE_2691_length_5439_cov_39.4416 AUGUSTUS gene 294 632 . + . ID=g6967;Name=g6967.t1 NODE_2691_length_5439_cov_39.4416 AUGUSTUS mRNA 294 632 . + . ID=g6967.t1;Parent=g6967;Name=g6967.t1 NODE_2691_length_5439_cov_39.4416 AUGUSTUS exon 294 316 . + . ID=g6967.t1.exon1;Parent=g6967.t1 NODE_2691_length_5439_cov_39.4416 AUGUSTUS CDS 294 316 . + 2 ID=cds.g6967.t1;Parent=g6967.t1 NODE_2691_length_5439_cov_39.4416 AUGUSTUS exon 549 632 . + . ID=g6967.t1.exon2;Parent=g6967.t1 NODE_2691_length_5439_cov_39.4416 AUGUSTUS CDS 549 632 . + 0 ID=cds.g6967.t1;Parent=g6967.t1 #PROT g6967.t1 g6967 ASSRLSLRTLLPRSNRSLYLSFATNWPKRSRLRQT # PASA_UPDATE: g14308.t1, single gene model update, valid-1, status:[pasa:asmbl_10117,status:12], valid-1 NODE_956_length_15483_cov_37.2578 . gene 11472 13198 . - . ID=g14308;Name=g14308.t1 NODE_956_length_15483_cov_37.2578 . mRNA 11472 13198 . - . ID=g14308.t1;Parent=g14308;Name=g14308.t1 NODE_956_length_15483_cov_37.2578 . five_prime_UTR 13133 13198 . - . ID=g14308.t1.utr5p1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . exon 13061 13198 . - . ID=g14308.t1.exon1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . CDS 13061 13132 . - 0 ID=cds.g14308.t1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . exon 12824 12894 . - . ID=g14308.t1.exon2;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . CDS 12824 12894 . - 0 ID=cds.g14308.t1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . exon 12549 12723 . - . ID=g14308.t1.exon3;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . CDS 12549 12723 . - 1 ID=cds.g14308.t1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . exon 12173 12409 . - . ID=g14308.t1.exon4;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . CDS 12173 12409 . - 0 ID=cds.g14308.t1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . exon 11472 11982 . - . ID=g14308.t1.exon5;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . CDS 11785 11982 . - 0 ID=cds.g14308.t1;Parent=g14308.t1 NODE_956_length_15483_cov_37.2578 . three_prime_UTR 11472 11784 . - . ID=g14308.t1.utr3p1;Parent=g14308.t1 #PROT g14308.t1 g14308 MAPDTVRLSRKCAALRLKCDDIARINSSLSEKMHRSRRLTSRLRAERDFLVKKLRSFDNSVPAEGDDAECRLFVAQLVRHDSIAAAGLNVETGDESSAEEETPTDMASVTRTHDSGRPSARPSSSARESDVSLPKRPRNAFILFCNDARVVAHGELETATASGEQTDLRRIYSNRWKNLAPEDKQRYFDQYELEKQRYVNERRGIAIMAAGGGSAITADPVAVAGGASGAGGVISDDSLGPARDEISVVR* # PASA_UPDATE: g14305.t1, single gene model update, valid-1, status:[pasa:asmbl_10116,status:12], valid-1 NODE_956_length_15483_cov_37.2578 . gene 369 3577 . - . ID=g14305;Name=g14305.t1 NODE_956_length_15483_cov_37.2578 . mRNA 369 3577 . - . ID=g14305.t1;Parent=g14305;Name=g14305.t1 NODE_956_length_15483_cov_37.2578 . five_prime_UTR 3519 3577 . - . ID=g14305.t1.utr5p1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 3298 3577 . - . ID=g14305.t1.exon1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 3298 3518 . - 0 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 3032 3086 . - . ID=g14305.t1.exon2;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 3032 3086 . - 1 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 2604 2747 . - . ID=g14305.t1.exon3;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 2604 2747 . - 0 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 2230 2364 . - . ID=g14305.t1.exon4;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 2230 2364 . - 0 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 1931 2028 . - . ID=g14305.t1.exon5;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 1931 2028 . - 0 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 1536 1746 . - . ID=g14305.t1.exon6;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 1536 1746 . - 1 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . exon 369 1391 . - . ID=g14305.t1.exon7;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . CDS 1077 1391 . - 0 ID=cds.g14305.t1;Parent=g14305.t1 NODE_956_length_15483_cov_37.2578 . three_prime_UTR 369 1076 . - . ID=g14305.t1.utr3p1;Parent=g14305.t1 #PROT g14305.t1 g14305 MGLSGSLAHLGAAVLRVTGVESLLLSLGRTVGKSILVSIVAVILLGTASFAYSAFYLVYIPTVSHVKPVHFQLGPLPESLPSWEMELTPYDSLLRGGQAYDVSVSLEIPESSVNQNAGMFMVTVTLESKDGASSFTSRRPTILRHKSFLLQTMSTMFYLPLLVLGMSEEKQHLRVFPFERFVDDAVHPIVRARISLSRPDLQVYSSEFRIDAHFTGLRYVMYWWPISSAAAAITSGFLCQAFMVFLVYLRFAPAGDDEPLALRRPNVRPLPAAPRTPAVIQTHGPVTSAVETTSEAAHTSELSQGAPIADWKGALDSIAAAASVSVERAVDSLADELVAHHEQQQQQQEPRVTSTSTTGAADAGVESIGAAESTDLQNEAFVEGLRRRIAHQ* # PASA_UPDATE: g14306.t1, single gene model update, valid-1, status:[pasa:asmbl_10113,status:3], valid-1 NODE_956_length_15483_cov_37.2578 . gene 3800 5233 . + . ID=g14306;Name=g14306.t1 NODE_956_length_15483_cov_37.2578 . mRNA 3800 5233 . + . ID=g14306.t1;Parent=g14306;Name=g14306.t1 NODE_956_length_15483_cov_37.2578 . five_prime_UTR 3800 3858 . + . ID=g14306.t1.utr5p1;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . exon 3800 3998 . + . ID=g14306.t1.exon1;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . CDS 3859 3998 . + 0 ID=cds.g14306.t1;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . exon 4364 4407 . + . ID=g14306.t1.exon2;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . CDS 4364 4407 . + 1 ID=cds.g14306.t1;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . exon 4558 5233 . + . ID=g14306.t1.exon3;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . CDS 4558 4853 . + 2 ID=cds.g14306.t1;Parent=g14306.t1 NODE_956_length_15483_cov_37.2578 . three_prime_UTR 4854 5233 . + . ID=g14306.t1.utr3p1;Parent=g14306.t1 #PROT g14306.t1 g14306 MSTPVARAPSVAVQGGEADAVIVRAAESLSAQLDTLQSLIDGIHEKTLMSLKAPYSIEHANADYTQLAAAVRSIAELTSSSGLAAFPLLPPPDNNNSSSNNNNNNNDNNDNTNNSGDGGTATAFDAAALLMRDCARTDDEERARAFRNAASAKSAAQRV* # ORIGINAL: g14309.t1 original gene structure, not modified by PASA NODE_956_length_15483_cov_37.2578 AUGUSTUS gene 13934 15315 . + . ID=g14309;Name=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS mRNA 13934 15315 . + . ID=g14309.t1;Parent=g14309;Name=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 13934 14458 . + . ID=g14309.t1.exon1;Parent=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 13934 14458 . + 0 ID=cds.g14309.t1;Parent=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 14691 14911 . + . ID=g14309.t1.exon2;Parent=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 14691 14911 . + 0 ID=cds.g14309.t1;Parent=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 15132 15315 . + . ID=g14309.t1.exon3;Parent=g14309.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 15132 15315 . + 1 ID=cds.g14309.t1;Parent=g14309.t1 #PROT g14309.t1 g14309 MAARDAGGGASHGPVAAAGVSPDTASTAAAKGVTTSGGIASWGASLFGVRKMAGAAADEEAGLVQSRAQLTNITVRPEDNRQPTMGLDEESADALADALAEQGHGYGAVTLEDAAQPDTVLSVVVPSERGGNVDWRPVSLGSGCGAFRKWTASTPSGVEPGCATTARMAVNSKMPAPHSRNSVLCRATLSLVDLCRACNALFNYDPSLNPRRILTAPPDAAPDNPYDNTEGDYILRVNDVICGDTEDQRYIVLDLLGKGTFGQVVRCECTATRDHVAIKVVKNRPAYFNQSMIEVRILGLVGHVPHTPL* # ORIGINAL: g14304.t1 original gene structure, not modified by PASA NODE_956_length_15483_cov_37.2578 AUGUSTUS gene 2 762 . + . ID=g14304;Name=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS mRNA 2 762 . + . ID=g14304.t1;Parent=g14304;Name=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 2 131 . + . ID=g14304.t1.exon1;Parent=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 2 131 . + 2 ID=cds.g14304.t1;Parent=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 322 430 . + . ID=g14304.t1.exon2;Parent=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 322 430 . + 1 ID=cds.g14304.t1;Parent=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 649 762 . + . ID=g14304.t1.exon3;Parent=g14304.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 649 762 . + 0 ID=cds.g14304.t1;Parent=g14304.t1 #PROT g14304.t1 g14304 RSLPSDFAATFALSCEFAAVGVLVPSLLVHDWDVAARTFAAGRPETPLEYLSFGIFAGAVGGTWLGSFPIPLDWDRPWQTWPITCAVGCLLGSQVGGVIGLIGATRAARARKPKLG* # ORIGINAL: g14307.t1 original gene structure, not modified by PASA NODE_956_length_15483_cov_37.2578 AUGUSTUS gene 4949 11307 . - . ID=g14307;Name=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS mRNA 4949 11307 . - . ID=g14307.t1;Parent=g14307;Name=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 10090 11307 . - . ID=g14307.t1.exon1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 10090 11307 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 9796 9902 . - . ID=g14307.t1.exon2;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 9796 9902 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 9490 9626 . - . ID=g14307.t1.exon3;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 9490 9626 . - 1 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 9036 9195 . - . ID=g14307.t1.exon4;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 9036 9195 . - 2 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 8696 8831 . - . ID=g14307.t1.exon5;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 8696 8831 . - 1 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 8439 8517 . - . ID=g14307.t1.exon6;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 8439 8517 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 7950 8092 . - . ID=g14307.t1.exon7;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 7950 8092 . - 2 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 7499 7627 . - . ID=g14307.t1.exon8;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 7499 7627 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 7008 7286 . - . ID=g14307.t1.exon9;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 7008 7286 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 6465 6601 . - . ID=g14307.t1.exon10;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 6465 6601 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 6279 6367 . - . ID=g14307.t1.exon11;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 6279 6367 . - 1 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 5763 5929 . - . ID=g14307.t1.exon12;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 5763 5929 . - 2 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 5424 5514 . - . ID=g14307.t1.exon13;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 5424 5514 . - 0 ID=cds.g14307.t1;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS exon 4949 5175 . - . ID=g14307.t1.exon14;Parent=g14307.t1 NODE_956_length_15483_cov_37.2578 AUGUSTUS CDS 4949 5175 . - 2 ID=cds.g14307.t1;Parent=g14307.t1 #PROT g14307.t1 g14307 MSSADPLASLTSLLVAAQSPVESSRRAAEATLNSLAQSDGAFGVTLVRLVVAHAGTRDPAAVAARLLASILLRHYVEHHWSATDDKFSQPEVSPEAKVAIKTLLPPLLADGSPRIRAAIAAVVAAIASHDWPEEWGELFSLLHSLLRGDDPAGVHGAMRALYEFANDLTGDQAPAAVTALAPELFRIFVEGRHSERTRGRAVAILTILIKMIGVVSSMDRGVVDSVLAPMLPSWVDAFAAALAAPLAPDGAGAAGTVGLGIRTDVLRCVGELASDFPALMAPYFRDRLLAPVWSSISACYPEYISSVVRGDGDADVEVDSDGEALGTEGLIVASFQLLHQLCEGAADVRVLVLPALVPLVRMTVHFMQITDEQSDLWSADVDAYVMDEAEESLSFNVRVIAQELIEALSDAHERATVDAVLQVATSAIDEGFAARDAGDEHWWRLHEASLLSIGILADAIKSLSRKGKITFDSGAFIERVLSAYGMNVSPFLIGRVLWFAGCFADAMAGPLVAKFIDFTVGALDPSQPAPVRIAALRAVHRFVAGIEPAALAPFCPRLMLNAIELGPQSTSDVVQLVLDTLARLVKVNPEATLALLDKIMTLVMGFWVAGSEDVFLTSAVAEVIGELASCPGCNSALRERLLPAIINILGTSDKASPAVATALGLLAVLLRHETCPAPADVVAAIFPALFSTVSTTDATEILQNGMECFRSLVRVAAAQLSSTRLPDGTTAVDAVAQVALQHLAPGHSESLAMFACPLVLRIVRSAAPDVASRLLPTLLAAMVQRLALAQMPTFVQDTIDFLASVPLPFPDNSGSASGLEALVRKWIANHKTFAGHSAIRTSSIGLARLLLSGDARIHAISVTEHVISQTKAPPPQVVSISAIQKICLLLAQELTDVVEGAERAKDGSDDEYEDDDGDDDCGDEDGEDEGWEDADASRGRSRQSPYAPAEDYAHMLSDMPSVGFFDDDDDSVDPTDIENAADDPNGAVVLRGFLEDFFRSFAAHDRQAFEAFVRVLGSDKRHVLAAVEGTGR* # ORIGINAL: g8711.t1 original gene structure, not modified by PASA NODE_4153_length_2105_cov_21.1089 AUGUSTUS gene 901 2105 . + . ID=g8711;Name=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS mRNA 901 2105 . + . ID=g8711.t1;Parent=g8711;Name=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS exon 901 981 . + . ID=g8711.t1.exon1;Parent=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS CDS 901 981 . + 0 ID=cds.g8711.t1;Parent=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS exon 1249 1494 . + . ID=g8711.t1.exon2;Parent=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS CDS 1249 1494 . + 0 ID=cds.g8711.t1;Parent=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS exon 1752 2105 . + . ID=g8711.t1.exon3;Parent=g8711.t1 NODE_4153_length_2105_cov_21.1089 AUGUSTUS CDS 1752 2105 . + 0 ID=cds.g8711.t1;Parent=g8711.t1 #PROT g8711.t1 g8711 MARVNGFLRCPYGALLLAVVLATLSCTDAQQRGTLTVTLGQASISENDCNDALISGYTACDPYFSITIENVASAAVFCPASPSAYIKKPGNPFSASKFLCAASITSKLANSMKLSVSVKDYDTIGGDDDIGSGSLDVDLSKPTNGRISFGSSWVDFGTTFSCIGNYAGSNCNECKTNYYGASCTQCPTTCGTAVPSCVDKIGGSGNCLSCPGDTYGPTCTGQCKCAS # ORIGINAL: g7429.t1 original gene structure, not modified by PASA NODE_1396_length_11609_cov_42.4138 AUGUSTUS gene 1077 2309 . - . ID=g7429;Name=g7429.t1 NODE_1396_length_11609_cov_42.4138 AUGUSTUS mRNA 1077 2309 . - . ID=g7429.t1;Parent=g7429;Name=g7429.t1 NODE_1396_length_11609_cov_42.4138 AUGUSTUS exon 1077 2309 . - . ID=g7429.t1.exon1;Parent=g7429.t1 NODE_1396_length_11609_cov_42.4138 AUGUSTUS CDS 1077 2309 . - 0 ID=cds.g7429.t1;Parent=g7429.t1 #PROT g7429.t1 g7429 MVQPTAAIREPIADLLEESHLVVSCSHVLADIQASRASHRRLPFASELDDDNAPSQMSFSRHKLRLRGMSALHAAKYMFGAAREPVPSYPLTAGGECVCCIAWSCNETADTNYVEGLLQRAFVDVAQYSAAGYVRLLATRGQHSVSFILTDVAQFLGCAAFHGYERRFGTMCLLGLSHLPYALLVRTLIPAMYGACVAGRADFARRVWAYANARRGPEEPQPIKLLHMRYIKALKMHVTSHALASFVFLWPDEFHDAVFIECIRGGQIAHATALAAGSAHLREKIGSMIPAQADKATLTATRIGTDECLLWSQMTSEETIALDIVRSRLRWAAATIWRAWWLYAYAPTTEANMTRVHRMFNRIHYNRVMQELSDRGRVSSAGMFPFDRDAALAIPNGANSMGREMNWREI* # PASA_UPDATE: g7431.t1, single gene model update, valid-1, status:[pasa:asmbl_1453,status:12], valid-1 NODE_1396_length_11609_cov_42.4138 . gene 6276 7628 . - . ID=g7431;Name=g7431.t1 NODE_1396_length_11609_cov_42.4138 . mRNA 6276 7628 . - . ID=g7431.t1;Parent=g7431;Name=g7431.t1 NODE_1396_length_11609_cov_42.4138 . five_prime_UTR 7559 7628 . - . ID=g7431.t1.utr5p1;Parent=g7431.t1 NODE_1396_length_11609_cov_42.4138 . exon 6276 7628 . - . ID=g7431.t1.exon1;Parent=g7431.t1 NODE_1396_length_11609_cov_42.4138 . CDS 6539 7558 . - 0 ID=cds.g7431.t1;Parent=g7431.t1 NODE_1396_length_11609_cov_42.4138 . three_prime_UTR 6276 6538 . - . ID=g7431.t1.utr3p1;Parent=g7431.t1 #PROT g7431.t1 g7431 MSVLRGISGLRASILNCAPSSVVRSDTARRCIVANGATSAIRALCTTRSTAFAVSPLNKNNNKNNNNNNTKTTSEYVLQTGNAGADRLRILNSILGPRTTLLFETIGVKRGWKVADIGCGIGSVSLILARMVGPEGHVYAVDASESQLEIARASAEKEGLSNISFHLASATGTGLAAGTLDMAYCRALLVHLSDALGAVKEFTRIVKPNGGIVAAEEPDLACRWCEPPHVSFSRYAEVFVALGETRNQNFRLGRQLHTLFLDAGFPEPEVTYNAAALLRGENKRIMDLTLGESADVVVSNGIETRENVNRILSDLRALAADTTTLFVMTYGQAWARRQG* # PASA_UPDATE: g7432.t1, single gene model update, valid-1, status:[pasa:asmbl_1455,status:12], valid-1 NODE_1396_length_11609_cov_42.4138 . gene 8047 11331 . - . ID=g7432;Name=g7432.t1 NODE_1396_length_11609_cov_42.4138 . mRNA 8047 11331 . - . ID=g7432.t1;Parent=g7432;Name=g7432.t1 NODE_1396_length_11609_cov_42.4138 . five_prime_UTR 11298 11331 . - . ID=g7432.t1.utr5p1;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . exon 9837 11331 . - . ID=g7432.t1.exon1;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . CDS 9837 11297 . - 0 ID=cds.g7432.t1;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . exon 9282 9564 . - . ID=g7432.t1.exon2;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . CDS 9282 9564 . - 0 ID=cds.g7432.t1;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . exon 8047 8961 . - . ID=g7432.t1.exon3;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . CDS 8219 8961 . - 2 ID=cds.g7432.t1;Parent=g7432.t1 NODE_1396_length_11609_cov_42.4138 . three_prime_UTR 8047 8218 . - . ID=g7432.t1.utr3p1;Parent=g7432.t1 #PROT g7432.t1 g7432 MDPEMDLLKHVWTGICEPADGHRLLGALLTSMSKAVNATGFTLYCADIASKELRLVVSRRGNDPLKTPLTGTTGFGTSPPSSCAAPTTGNGNGSIGGNAVASKLDGADSVSFGHGVCGKVAEGGQTLRLGRGEMVGMGSSRRCVLCVPVWTSSRLRLKESASLNGLNGSASQSRLNFDAVGKDERGDGHDGQQRAEEDKVELLGVCEVYDKKNAECFSVEDESMLRNALEHCSILMRNLRALAEMRIHARNTALLLTTIRSMFEGGGVFDLNRLLRKIMNHARKLVHADRCSIFLVDEATSELYSRVFDVNSHMVDGVEQGEEEPDEAVDVMADELASAALGRGRHDSALTVTNASGPKSSTVSAPPLRPSLFSAPAEDCVRFPLSKGIAGHVATTGEVLNIVNAYADSRFNKQVDQQTGYKTNTILCMPIRNGSDIIGVAQMVNKVGGCFTATDERLFAAFAAFCGLAIHHAQLYEKLNKSEQMHKVALEVLSYHAVCHEHEWKGLCAQRIPKVDEVPLFLSFDLSPFDLMEDQKPLLVLRMFEELGAYDGKFRVDKETLCRFVLTVRKNYRRVPYHNWTHAFNVAHTMYLIIQHGRMRQVFTEIEIMGLFVACLCHDLDHRGTNNQFQINESTALACLYSTAVLEHHHFAHTVTILRQDGHDIFARLSKEQYSAMLGVLRHAILATDLASYPGNRKKLETAVEEDGFNKHSSEQVSLLRSLLMTACDISAVAKPWVQQESTARTIFEEFYAQGDAERASGRTPIAMMDRSKSCELPQMQIGFIDFICAPAFSLLARVIPATKPLCDNCLDNRGRWKERVDANCMAK* # PASA_UPDATE: g7430.t1, single gene model update, valid-1, status:[pasa:asmbl_1454,status:12], valid-1 NODE_1396_length_11609_cov_42.4138 . gene 3105 5298 . - . ID=g7430;Name=g7430.t1 NODE_1396_length_11609_cov_42.4138 . mRNA 3105 5298 . - . ID=g7430.t1;Parent=g7430;Name=g7430.t1 NODE_1396_length_11609_cov_42.4138 . exon 5037 5298 . - . ID=g7430.t1.exon1;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . CDS 5037 5298 . - 0 ID=cds.g7430.t1;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . exon 4287 4837 . - . ID=g7430.t1.exon2;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . CDS 4287 4837 . - 2 ID=cds.g7430.t1;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . exon 3372 4035 . - . ID=g7430.t1.exon3;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . CDS 3790 4035 . - 0 ID=cds.g7430.t1;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . exon 3105 3146 . - . ID=g7430.t1.exon4;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . three_prime_UTR 3372 3789 . - . ID=g7430.t1.utr3p1;Parent=g7430.t1 NODE_1396_length_11609_cov_42.4138 . three_prime_UTR 3105 3146 . - . ID=g7430.t1.utr3p2;Parent=g7430.t1 #PROT g7430.t1 g7430 MKRCVLGACIAVALCGVALITVGSVLHWAVTQDSHPVTTFEYGIVLDGGSSKTSLFVYTWSKRVMPGQSRVSAAPTLSQYKWTCRSKASGISSFENPEDAAASLQPLLDCAMGLIPREAHASTPIYFAATAGMRLVALANTTLADSLMSAVCGKLAASAFDAAHGRCRIIKGTEEALYGWITTNYLMGNFMQSPDMRRSTITPDEERTLGSMDLGGASTQITFVPANRTGVEPANNVDANLFGVEYRTFAVSYLRYGNDQARMRLEGNLTTNSTTATASNPCLPAGYSRVALDGSTTLVGSGDADQCAALVDALINKTECGCASGCGIEGTCSPPFAENSLRFLRFTTEPPI* # ORIGINAL: g3874.t1 original gene structure, not modified by PASA NODE_1189_length_13275_cov_37.9538 AUGUSTUS gene 8900 10756 . - . ID=g3874;Name=g3874.t1 NODE_1189_length_13275_cov_37.9538 AUGUSTUS mRNA 8900 10756 . - . ID=g3874.t1;Parent=g3874;Name=g3874.t1 NODE_1189_length_13275_cov_37.9538 AUGUSTUS exon 8900 10756 . - . ID=g3874.t1.exon1;Parent=g3874.t1 NODE_1189_length_13275_cov_37.9538 AUGUSTUS CDS 8900 10756 . - 0 ID=cds.g3874.t1;Parent=g3874.t1 #PROT g3874.t1 g3874 MDPSVPFLFTVHIPRAYFDGQNLHAHAAETDDDSQTKHSSKSRDGDSQSPTSSLLRGEVDSHANLTRRVVRIHDTKTDGTADNAPHVNAIEERVTEQQFERKDVFTDVHRILGGFGIRPAWSKSTISQDQRDGTPMSVVVERQSASFIVLCNADLVYESLVRYGVGVRFGSVCAVPATNACVARLGVEASQPTGEDATADPGLIGVTDLPSRVRMYKQSRAREFVHRIVLETEAAAAISFDYVSLVVIASVIAAMGLAQNSPVAVVAAMLVSPLMGPVMACTFGTVIRDFRMVRRAIVSEALGLSIALVLGFVAGLCMSYFGPDLGWPNAEMESRGSVSGLYFGIVVASASGVGVALSILKQNTSSLVGVAISASLLPPAVNAGMNWAYAAIGPAIHGSATVNAHQHARIGGISLALTALNIALIYISAMIVFKMKEVAPVKVSETSNLFRDDVKEAREYVLTHRTVRGDSADSHMGLAQRFGLLLGRHGHDRTHKKTDTRRATVATSTLANLSVHPDAPSASSLNGEKGVARDTSLRDSHTAPPVSSYRRGSLPVTMELRLQGLSGQQPLSSECTALGINPVFNVRETESKGSASQSTSIDMSPTATDVSGTRMRHD* # PASA_UPDATE: g3873.t1, single gene model update, valid-1, status:[pasa:asmbl_695,status:12], valid-1 NODE_1189_length_13275_cov_37.9538 . gene 96 7321 . + . ID=g3873;Name=g3873.t1 NODE_1189_length_13275_cov_37.9538 . mRNA 96 7321 . + . ID=g3873.t1;Parent=g3873;Name=g3873.t1 NODE_1189_length_13275_cov_37.9538 . five_prime_UTR 96 97 . + . ID=g3873.t1.utr5p1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 96 1150 . + . ID=g3873.t1.exon1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 98 1150 . + 0 ID=cds.g3873.t1;Parent=g3873.t1;5_prime_partial=true NODE_1189_length_13275_cov_37.9538 . exon 1532 2207 . + . ID=g3873.t1.exon2;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 1532 2207 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 2596 2756 . + . ID=g3873.t1.exon3;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 2596 2756 . + 2 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 3046 3111 . + . ID=g3873.t1.exon4;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 3046 3111 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 3509 3556 . + . ID=g3873.t1.exon5;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 3509 3556 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 3990 4064 . + . ID=g3873.t1.exon6;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 3990 4064 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 4311 4502 . + . ID=g3873.t1.exon7;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 4311 4502 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 4767 4885 . + . ID=g3873.t1.exon8;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 4767 4885 . + 0 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 5065 5118 . + . ID=g3873.t1.exon9;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 5065 5118 . + 1 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 5506 5535 . + . ID=g3873.t1.exon10;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 5506 5535 . + 1 ID=cds.g3873.t1;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . exon 5830 7321 . + . ID=g3873.t1.exon11;Parent=g3873.t1 NODE_1189_length_13275_cov_37.9538 . CDS 5830 7321 . + 1 ID=cds.g3873.t1;Parent=g3873.t1 #PROT g3873.t1 g3873 SSFVQVSFCNFSMNIAVGGGAIFLRATAGANFTDTIFSRNGAITLGGAIVMQASTLLYCERVQFIDNGVVDGDAGAIAIRGQGIMFLSSVVFSLNDADGSGGAISAKGQDRDSDSLTCTGEGVHTLPGFFLMLTDFESLDNKAKNGEGGFIAASGGHVILTGGLIHRNAASSHGGALAYYEPIAQSNVTSSIAEDVVGSAADVFKTLLSIGVLSKNKYETLKTQNPHLFTEEGDDKEQSERHGLYVANTTFKHNAAGRYKGDGGAVYLLQQDASSCQLHNVSFLSNVAEVGSGGAVFLANPAQRPTFSLITVRGNVARASSDDFATSGSRLYVELAGDSRYPLPLSLTSTPSVTAFVDTYGANGTITLSGMVFPTVVVTLVDAFDHPLLVSGGDYEVHVSLIPVANISRITAKLYEADARNLINGRATFSRMVIAGDTGTYTLRFYLNERLAETSAAAVSRRSVRGENNNNNNNNNGMNVGGNRASRELRRRYIDDTFLADEYPVLGLIPDSQLSTGTSPMGETATMVLPCSDGFVFDNGTATGGSPLCTMADGDSASSVSVGAIVGLAVAGGFGCGVIAFIVLFRHLRRQESKRAHSTFVKKNVIGRADLAAIEISRDSIEVQNKLGEGEFGVVHKGRIFNGRQWRVCAIKTLKEGCTYAQRKEFLQEAEIMLNVSHTNVVGLIGIATTDEPMHIFLELMPHGSLKTYVQAIPQRRQNSPSVCVEFLQFAADIASGMDYLTGKKIVHMDLSARNCMVGQDLMGNYQIKVADFGLSRNMGESSYYRKSKTAKLPIKWTAPESITHKVFNAATDVWAFGILLWEMWSFGANPYPGISNSDVVRFVAFGGRNTPPVTCPDHVAVVMERCWSATPAFRPSFERLSVFFSADIVVERARVHALSLEADPSQARASLHSTASIPWPWRAGAHPGKAGYVGSHTSSLAAPGTGRAARDMGSVTSTAYVADGDVGIVENVGAHTESGLTTLSSPATRRALALKTRVDNDRKIASHTPSTASNEKTAFDPLTGNRAVFGGRPSNADVPRDCSFSLSQSPTPSDYDELEWFDLGSATCGTYTDIDGNGMSLSASRDGGSLQTADPRKSAASHGAAFGDGTPRGTTFGDARRVSILRRPNESTSPSLRKRSVLQTVLGRGMEFARGRGSNPDAGGGVGGMELGPMRHSVGGGGGHDIKAGTNHTSSSVHSGSNKHDDALARALLPQFDSSSPSLCATADGNIYDDGFAQQHGALDSNPHGTSSLSSSEKASEKASERASKGTSERTSRTAPSRDTVAIDVSVGVDGRIAFVEARAAAAAVASLEDPYVTLV* # PASA_UPDATE: g3875.t1, single gene model update, valid-1, status:[pasa:asmbl_696,status:12], valid-1 NODE_1189_length_13275_cov_37.9538 . gene 11427 13054 . - . ID=g3875;Name=g3875.t1 NODE_1189_length_13275_cov_37.9538 . mRNA 11427 13054 . - . ID=g3875.t1;Parent=g3875;Name=g3875.t1 NODE_1189_length_13275_cov_37.9538 . exon 12917 13054 . - . ID=g3875.t1.exon1;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . CDS 12917 13054 . - 0 ID=cds.g3875.t1;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . exon 12536 12678 . - . ID=g3875.t1.exon2;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . CDS 12536 12678 . - 0 ID=cds.g3875.t1;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . exon 12232 12343 . - . ID=g3875.t1.exon3;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . CDS 12232 12343 . - 1 ID=cds.g3875.t1;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . exon 11427 11971 . - . ID=g3875.t1.exon4;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . CDS 11801 11971 . - 0 ID=cds.g3875.t1;Parent=g3875.t1 NODE_1189_length_13275_cov_37.9538 . three_prime_UTR 11427 11800 . - . ID=g3875.t1.utr3p1;Parent=g3875.t1 #PROT g3875.t1 g3875 MITSHHQRSIPPEQQGVYHKELDSLVEQRKSRRQQDRKDTYAQELEHVTTVDEGRNWGRPGAGAPIRDDEGHVKAHIQGAARDLHEVAGIAPRKIDPKEAAKYHHELDTMRGARDTQRIRARELERNLSQQHVANYGRAFGRPGHGAPLIHHGHIETVPMKVAPDIIELRKNAIIVGGAASVRAIDK* # ORIGINAL: g2807.t1 original gene structure, not modified by PASA NODE_5341_length_899_cov_44.8944_potentialcontaminant AUGUSTUS gene 2 625 . + . ID=g2807;Name=g2807.t1 NODE_5341_length_899_cov_44.8944_potentialcontaminant AUGUSTUS mRNA 2 625 . + . ID=g2807.t1;Parent=g2807;Name=g2807.t1 NODE_5341_length_899_cov_44.8944_potentialcontaminant AUGUSTUS exon 2 625 . + . ID=g2807.t1.exon1;Parent=g2807.t1 NODE_5341_length_899_cov_44.8944_potentialcontaminant AUGUSTUS CDS 2 625 . + 0 ID=cds.g2807.t1;Parent=g2807.t1 #PROT g2807.t1 g2807 HCLQRLSEISIILGYFDQAARYEEELGGHFQDTFCFEQARTHYRLAVSYGDNPTRMLKFKLAAIEAKLGDYQEAIKLLQAIEKSDINRLGAHIAHATRFKLCVLSGVSSPHDDAVSCQHNVDGCGTNRSIGVNVEGMKHLLDEYGDEFTRSLEGKTIQLLVDAIEKQDVEEFTTVLVDYDARCRLDSWITELLVKMKRAICAEPSVL* # PASA_UPDATE: g4038.t1, single gene model update, valid-1, status:[pasa:asmbl_5018,status:12], valid-1 NODE_2792_length_5113_cov_37.2469 . gene 3237 5054 . + . ID=g4038;Name=g4038.t1 NODE_2792_length_5113_cov_37.2469 . mRNA 3237 5054 . + . ID=g4038.t1;Parent=g4038;Name=g4038.t1 NODE_2792_length_5113_cov_37.2469 . five_prime_UTR 3237 3495 . + . ID=g4038.t1.utr5p1;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . exon 3237 3759 . + . ID=g4038.t1.exon1;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . CDS 3496 3759 . + 0 ID=cds.g4038.t1;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . exon 4009 4329 . + . ID=g4038.t1.exon2;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . CDS 4009 4329 . + 0 ID=cds.g4038.t1;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . exon 4509 4734 . + . ID=g4038.t1.exon3;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . CDS 4509 4734 . + 0 ID=cds.g4038.t1;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . exon 4915 5054 . + . ID=g4038.t1.exon4;Parent=g4038.t1 NODE_2792_length_5113_cov_37.2469 . CDS 4915 5054 . + 2 ID=cds.g4038.t1;Parent=g4038.t1 #PROT g4038.t1 g4038 MEDGRTAVFLQFEFAQKKTSTVSFADGILAKVIKDDAVRAVLKQVAAARLACVAAIASKERGDNTAAKQAVAEYTALARGLVAKSNAELDLASPLRHAASFEWTQTFGADAKPITAVDAQFDVANILVAYAFYLLRGVSEGSNSGLDELGCKGIYDVLRTAGGVVDALTKTPMQSGDVSAPILDLLKDLILADAQNVSIAVAQLKGHKGGLLSSICSDTADAYVAVGTRAAALTEASKNKNVAKVAAYAAFKAKAYQALAYSWSAQASFEGDKCGDAIASSRRADKLWEEALELAKAYDKIEPRGKTATADHAFVQ* # PASA_UPDATE: g4037.t1, single gene model update, valid-1, status:[pasa:asmbl_5017,status:12], valid-1 NODE_2792_length_5113_cov_37.2469 . gene 43 2494 . + . ID=g4037;Name=g4037.t1 NODE_2792_length_5113_cov_37.2469 . mRNA 43 2494 . + . ID=g4037.t1;Parent=g4037;Name=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 43 288 . + . ID=g4037.t1.exon1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 43 288 . + 0 ID=cds.g4037.t1;Parent=g4037.t1;5_prime_partial=true NODE_2792_length_5113_cov_37.2469 . exon 471 620 . + . ID=g4037.t1.exon2;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 471 620 . + 0 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 725 833 . + . ID=g4037.t1.exon3;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 725 833 . + 0 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 1041 1126 . + . ID=g4037.t1.exon4;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 1041 1126 . + 2 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 1208 1381 . + . ID=g4037.t1.exon5;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 1208 1381 . + 0 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 1501 1655 . + . ID=g4037.t1.exon6;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 1501 1655 . + 0 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 1761 1899 . + . ID=g4037.t1.exon7;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 1761 1899 . + 1 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 2017 2042 . + . ID=g4037.t1.exon8;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 2017 2042 . + 0 ID=cds.g4037.t1;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . exon 2302 2494 . + . ID=g4037.t1.exon9;Parent=g4037.t1 NODE_2792_length_5113_cov_37.2469 . CDS 2302 2494 . + 1 ID=cds.g4037.t1;Parent=g4037.t1 #PROT g4037.t1 g4037 SAAVVVGTCELITVAFVAYEQGGDPMGTLDMRGARLSPGATESDMSIVTRDGARYSFQAASPSDREEWMRVLRAAAERVVKDSDTMLGIAPKKDKPLDLAVITRMIDMEEERLKDLTAKYESYYDPPATLENLLMVQQMRVKELRIKRQRLEETAKAEDAISRKESTMEATRQGQLSKMTPEDFTFWKVLGKGTFGKVMLASKKDTKTIYAVKIIKKSVVQINEQSVTHANTENRVLKLLHHPFLVRLECAFQTDDRLYFVMEYINGGEVYTHLQRTGRFTEEKTRFYIAEITSALTYLHDKGIVYRDLKLENLLLDKTGHVKITDFGLSKDNLQMEDRTTTFCGTPEYIAPEVLEDDDYGKYKADISVEQKEALLELIKIHAHPQITPEVRREIVHSRSRDVELPMEGVDTDAQMGVEDDAMES* # ORIGINAL: g1602.t1 original gene structure, not modified by PASA NODE_507_length_22178_cov_39.4286 AUGUSTUS gene 5536 6621 . + . ID=g1602;Name=g1602.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS mRNA 5536 6621 . + . ID=g1602.t1;Parent=g1602;Name=g1602.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 5536 6621 . + . ID=g1602.t1.exon1;Parent=g1602.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 5536 6621 . + 0 ID=cds.g1602.t1;Parent=g1602.t1 #PROT g1602.t1 g1602 MANNRDPMPTSLSALLAAPKGRTEYVPGDAFLLHVFWEAPSASAAHTLLSGLQKCATATLRDAPCAPTYVFRVSNNDASLCPPPPRTVGDHPHVSGALKKLDVGIPVAAVRAELTKRGIDPSLAHLDASSPLPNELQTQPVAVEFTEVYLDERAFMDHAGSREYLDGYAVVMHPALHYRIPRTVRLGTPPEGMVERILEPVLHEIVMPLHAGCAVWRQPQSPPLNPVLLSLDVPWMEAFVEGSDGVKAGAAVTDALSIEFREQCTTCVAFTHPLRSKTTRLLCVIPSLPQPPILACLASLCAARGEAHITASSGDPSEAEAVVRDALAAAGLGFVTVNASECVGHVLHPRAADLHPLHCDQ* # ORIGINAL: g1601.t1 original gene structure, not modified by PASA NODE_507_length_22178_cov_39.4286 AUGUSTUS gene 1602 4793 . + . ID=g1601;Name=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS mRNA 1602 4793 . + . ID=g1601.t1;Parent=g1601;Name=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 1602 1769 . + . ID=g1601.t1.exon1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 1602 1769 . + 0 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 2042 2152 . + . ID=g1601.t1.exon2;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 2042 2152 . + 0 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 2583 2740 . + . ID=g1601.t1.exon3;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 2583 2740 . + 0 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 3167 3258 . + . ID=g1601.t1.exon4;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 3167 3258 . + 1 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 3777 3913 . + . ID=g1601.t1.exon5;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 3777 3913 . + 2 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 4297 4410 . + . ID=g1601.t1.exon6;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 4297 4410 . + 0 ID=cds.g1601.t1;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 4713 4793 . + . ID=g1601.t1.exon7;Parent=g1601.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 4713 4793 . + 0 ID=cds.g1601.t1;Parent=g1601.t1 #PROT g1601.t1 g1601 MAEHPLFLSDEGLSSSVHVHPVVYFSILDHFTRRNDNQKRVIGTLLGSVGEHGVIEVRNSFPVPHNETANEVAIDMEFHNNMFELYQKVNPKEVIVGWYATGTEITEYSVLIHDFYASETRTFDPVHLLVDTNLTNDQMSIRAFSSSPLGIPEKTAGTIFVPVKCEVKYHEAERIGVNLLQKARDVPNGTSNLLSDLDHLELAVNKTLDLLAIVEHYVERVLDGKIAGDSDVGRFILDTVAAVPKMETAQFERLFNSNLQDLLMVTYLANLTRTQLALAERLNNVL* # PASA_UPDATE: g1604.t1, single gene model update, valid-1, status:[pasa:asmbl_7843,status:12], valid-1 NODE_507_length_22178_cov_39.4286 . gene 16324 21744 . - . ID=g1604;Name=g1604.t1 NODE_507_length_22178_cov_39.4286 . mRNA 16324 21744 . - . ID=g1604.t1;Parent=g1604;Name=g1604.t1 NODE_507_length_22178_cov_39.4286 . five_prime_UTR 21744 21744 . - . ID=g1604.t1.utr5p1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 20873 21744 . - . ID=g1604.t1.exon1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 20873 21743 . - 0 ID=cds.g1604.t1;Parent=g1604.t1;5_prime_partial=true NODE_507_length_22178_cov_39.4286 . exon 20494 20576 . - . ID=g1604.t1.exon2;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 20494 20576 . - 2 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 20284 20345 . - . ID=g1604.t1.exon3;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 20284 20345 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 19765 19813 . - . ID=g1604.t1.exon4;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 19765 19813 . - 1 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 19240 19359 . - . ID=g1604.t1.exon5;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 19240 19359 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 18852 18898 . - . ID=g1604.t1.exon6;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 18852 18898 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 18499 18640 . - . ID=g1604.t1.exon7;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 18499 18640 . - 1 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 18201 18251 . - . ID=g1604.t1.exon8;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 18201 18251 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 17963 17992 . - . ID=g1604.t1.exon9;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 17963 17992 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 16934 17540 . - . ID=g1604.t1.exon10;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 16934 17540 . - 0 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . exon 16324 16769 . - . ID=g1604.t1.exon11;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . CDS 16429 16769 . - 2 ID=cds.g1604.t1;Parent=g1604.t1 NODE_507_length_22178_cov_39.4286 . three_prime_UTR 16324 16428 . - . ID=g1604.t1.utr3p1;Parent=g1604.t1 #PROT g1604.t1 g1604 YRLQRTAVEFVPLCKGAFLADDDACKEQWETRETFIRPFFQHTSTLVDTDLYPDTEYRYRLQVRPVNGTVTSSTSYVVVKSAAPSEPPSVRIIGVYEVTPGTLRLSWETVKDIHGFITQYEIYRGVGSNYRQNVTQVAALNRDKRYYDDAAVVVGNPYHYAVLAVVDDGVENGGIRRALPSPPPDRDTPRLTPSDGVLEGVMATDARSSGVTAPGSRGSGQAVVVAVAVIVSIGVIALVLAAMRWSYLRSRDGQRLMAHKEFVDKVVASADFAQFEIEKHAVNLLDEIGSGEFGIVYRARVATAEGRIRICAVKTLKEGSSVEDRQAFIDEAKIMRGLSNPYVMCLVGISIREEPMYILLEYVANGNLRRFTQLIPESQRRSHVTVKLLMLLCHQIAKGMEYLHSVGIVHRDLAARNIMVSNYAFGEYRAMVSDFGLSRSMHNSYYKKTKDGGKIAYKWMAPECLKRCVYDERSDVWSYGVTVWETFSFGEVPYASISNADTLAHVESGNRLPMPASIPPSMYTLIRQCWHAHPTQRPLFSNIVQETARMSEYSEAGEDRACGATSSSTGSASSADSATPSVVLVHPSDKKSFLSSVLSKFQGSATAQTRLRSNNNKGATEGTTSVTNLLHCAISPSQSPTDGGDDGDAVHTNPYANAPHAHWSVFNSGGGAYGVGKHKVLDVSSGEDAQSVPSPYEHDSVVGHGGISAMRMAASGSEVSPYDNSLGSDHSSCDHAAPVSSPYDNAPVHSPYDNAPVDSLCNIAPDTGHSPYDNELPPVCPDKSTADVCVALADEKPYDN* # ORIGINAL: g1603.t1 original gene structure, not modified by PASA NODE_507_length_22178_cov_39.4286 AUGUSTUS gene 8281 14565 . + . ID=g1603;Name=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS mRNA 8281 14565 . + . ID=g1603.t1;Parent=g1603;Name=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 8281 9972 . + . ID=g1603.t1.exon1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 8281 9972 . + 0 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 10283 10993 . + . ID=g1603.t1.exon2;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 10283 10993 . + 0 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 11218 11300 . + . ID=g1603.t1.exon3;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 11218 11300 . + 0 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 11665 11766 . + . ID=g1603.t1.exon4;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 11665 11766 . + 1 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 12248 12434 . + . ID=g1603.t1.exon5;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 12248 12434 . + 1 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 12897 12972 . + . ID=g1603.t1.exon6;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 12897 12972 . + 0 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 13393 13644 . + . ID=g1603.t1.exon7;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 13393 13644 . + 2 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 14058 14159 . + . ID=g1603.t1.exon8;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 14058 14159 . + 2 ID=cds.g1603.t1;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS exon 14507 14565 . + . ID=g1603.t1.exon9;Parent=g1603.t1 NODE_507_length_22178_cov_39.4286 AUGUSTUS CDS 14507 14565 . + 2 ID=cds.g1603.t1;Parent=g1603.t1 #PROT g1603.t1 g1603 MPRPTWRANPALSLMRTNNLVVLMVVLALFGTSSRCRGETDIYVDPSNSADVSQDGTLSHPFATIPQGIATAQTAAATDNATIHLAAATYKPATTAGYVFTTPTSFFITIASLSGTRDNTLVACNNSLGSVAGFVIGGAVQQLWIRNLSIMNCTNNAVRVSATASARLSGCRLTLQSVEAAVLVQNNAQILIEDSEITYSTRASAKFGGALNIINSAIADVRNTSFRFNVAPLGVSSGGAVAITDTTKLTMRDSEFVSNYAVDTGGAMVLLLSATATIYNTVFKLNACNQGGAASVANTVSLTCDGCTFIRNAAVDKGGSFHSRDNARLQLYNCWATGENARSGGSLYIKDSSVTKLDNVTFTNCSAGAGAAVHIKYLVNVSLNRVRFFNNTSTNGGGLYTLGAVDGKSYGITLNVTNTVFDTNYAVSGGGFYIVTPYVSTIFMENVTFVRNVASEYGAGMYSGQVFMNRTVIRGIQFLRNYAGIGGAGMYAQLADNAPGCAGCSFVNNTAELYGNDHGGPIARLSWYPDDSAAVVSTVTTGDELGSPMVRIADMYGQEVNYGDKYYLNLVVVRAFVLPPAGSSVTTAIIYGETLRAFVVGHLAFKEIRIAGTPGVHTVRFAASVAADTTVSLTLDSNVTVLDCTDGYVRTPIPSSPSYWSCEKALCVTYGCTNGFCNSTDVCTCREGWTGLGCTVAICPHGCHNGACISPGVCKCHALYYQSDCSQNYGLNIVAPIVCIFAFVLLVGAGFVVRRWILRAKNEHLSQQRHVIKYEELEFDPEPIAKGSFGEVFCANYRGAKVAVKRLKNASGNASVVGSSSLPSEVGMWANSVSKSIASRKEQSDRQRRISTSFGSDISKKIIHAAASALRKHSSSANSAAMLRTQKQAMDDLMREIDLMCKLRSPYLVLFMGCCEPPNLCIVQEFMDCGNVLNFLQSHQSISFDERVKIGKQIALGMLYLHENNPPIIHCDLKSLNCLIDSKMNVKVADFGLCQFKLEHTKRSKEASSSIVGSYLWLAPECAGGAEYTFKADVYSYGILMSELINGRRPYTEDKRHVLVIVSDVQTMDYRPALFGECTVAYRRLMW* # ORIGINAL: g2571.t1 original gene structure, not modified by PASA NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS gene 932 4617 . + . ID=g2571;Name=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS mRNA 932 4617 . + . ID=g2571.t1;Parent=g2571;Name=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 932 1276 . + . ID=g2571.t1.exon1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 932 1276 . + 0 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 1410 1523 . + . ID=g2571.t1.exon2;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 1410 1523 . + 0 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 1688 2021 . + . ID=g2571.t1.exon3;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 1688 2021 . + 0 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 2212 2406 . + . ID=g2571.t1.exon4;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 2212 2406 . + 2 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 2533 3759 . + . ID=g2571.t1.exon5;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 2533 3759 . + 2 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 4121 4242 . + . ID=g2571.t1.exon6;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 4121 4242 . + 2 ID=cds.g2571.t1;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 4405 4617 . + . ID=g2571.t1.exon7;Parent=g2571.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 4405 4617 . + 0 ID=cds.g2571.t1;Parent=g2571.t1 #PROT g2571.t1 g2571 MVVSVNREDFNVALHSYIVKQKKQHVFSDAKYDICVRILKRNKVQQMLKIATDAQPVNTARIAQLRRRLDEDVEIELPNFVKPHEITHITTTCYLQAAGTHGQVEDTIFKRPGAKETKRLGPIAVANAAVHNGVGAYDRRIPRANSIYDILSEIMQMKIDLPRQVVELFTNRCRTCPEKGRPVAARGKLRPIRTENYLDRIQIDLINMAATPDGAFKHILTVRDHFTRFTWLYALVSKEAQGVADNLEKQFDMFGAPSILQSDNGKEFVARVIQALAETVNATLINGRPYHPQSQGSVERANAVVTDLLYKWTRDKDRSDWHKGLSSVARAMNTTANAATGRTPFELIFGLPFFRGATVHLPKGQIDEEDLSDYNEGNNDEGRNANGSGHVGVQGNDIGVQGNNGSAKGNDDDDDNEEEEVEEEEVEDVEEEEEDVVEEEEEDVEEEEVEDVEEEEDVEEEKDEEEEEEEENNHDDDDDDDDDDDEDDANGSGGVQGNNGGVQGNNGGVQGNNSGAQGDNGGAQGNNGGAQGNNGGAQGNNGGAQGNNGGAQGDNGGAQGNNGGAQGDNGGAQGGNGKEPGTDEIDGPPRKRRRQAYHIEQAVFSSSTTDEYRAHANKHARSSVEASITRMECFFNSKRKPIPTYKLGDIVGVAIPADLRGHLRARILPCRVINIPQTNLYTLLSEFGTLNSNYTPEGLVELHKGNYMELSPANDAITTARISLAAACNAFAEKIIPGATNISGLSRTSGTSGGSAGHPGDLRVGPHLQVTTPTRISLELAETLFGSLFAKLAFADENVLALRKQRLRVHAEDGNPTKRLRSEDALYNAAILGRMASAVCRTQSRWLCP* # ORIGINAL: g2572.t1 original gene structure, not modified by PASA NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS gene 5156 5491 . - . ID=g2572;Name=g2572.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS mRNA 5156 5491 . - . ID=g2572.t1;Parent=g2572;Name=g2572.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 5156 5491 . - . ID=g2572.t1.exon1;Parent=g2572.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 5156 5491 . - 0 ID=cds.g2572.t1;Parent=g2572.t1 #PROT g2572.t1 g2572 MLSHYARVFELLVDDVEEPLHDVRPNPSAAPNDDLEHVFYCPHWRRFREEFVRRHTFPVGKLRNKRTSASDPAWVLHRPVRTTDFDGGVFRRSPPVVIEQLEAKRERRWGP* # ORIGINAL: g2570.t1 original gene structure, not modified by PASA NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS gene 50 285 . + . ID=g2570;Name=g2570.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS mRNA 50 285 . + . ID=g2570.t1;Parent=g2570;Name=g2570.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 50 285 . + . ID=g2570.t1.exon1;Parent=g2570.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 50 285 . + 2 ID=cds.g2570.t1;Parent=g2570.t1 #PROT g2570.t1 g2570 RALAMLVCSLVASLVAVVASLPFATSVTFEASVTFEASSSFAVSSFEASSSFAVSLPFEAPLPFAASSFATLCRLPL* # ORIGINAL: g2573.t1 original gene structure, not modified by PASA NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS gene 8600 10255 . - . ID=g2573;Name=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS mRNA 8600 10255 . - . ID=g2573.t1;Parent=g2573;Name=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 9981 10255 . - . ID=g2573.t1.exon1;Parent=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 9981 10255 . - 0 ID=cds.g2573.t1;Parent=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 9387 9778 . - . ID=g2573.t1.exon2;Parent=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 9387 9778 . - 1 ID=cds.g2573.t1;Parent=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS exon 8600 9207 . - . ID=g2573.t1.exon3;Parent=g2573.t1 NODE_1116_length_13818_cov_21.6127_potentialcontaminant AUGUSTUS CDS 8600 9207 . - 2 ID=cds.g2573.t1;Parent=g2573.t1 #PROT g2573.t1 g2573 MGSRKDIKRFIEATFTDYDMERMLMLHGNMIEYLGYKNERDLYEANDKHIDNCSEATLKHLQALKHLIEKEKMSIMDKESMVPFPASGIVQSNVGPVAVYHWALLFYAFVVAVLVLPSGASADVLHPLVFSNNDTSATVRVDGGANKTLVLDAGASGRIVLVANGTQSDFDRDVVRRIGSVESGLVQRLSVLENGTAQRLTDLEASLLKRLSALEEIVERQADACNVVVDPGMGRVVYNSVKNPNASAVGLDNPVEFWKIPYADRWTSRGMSMTPSLSSNCYCPKNYLRTSSFIVTDVFEDLNGTQFILFTASAKGINSTTMRFIQPTLLLGSQLLYDRQFAAGWSSFDYHGDNADSFNCADRYLATQHYGSCGAYNLSADMDVSPFTDSNWGPHVGSTLVTAGKTDGTDYTRVNRITRFIKQG* # ORIGINAL: g7348.t1 original gene structure, not modified by PASA NODE_4413_length_1655_cov_29.5494 AUGUSTUS gene 190 1573 . - . ID=g7348;Name=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS mRNA 190 1573 . - . ID=g7348.t1;Parent=g7348;Name=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS exon 1433 1573 . - . ID=g7348.t1.exon1;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS CDS 1433 1573 . - 0 ID=cds.g7348.t1;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS exon 1006 1103 . - . ID=g7348.t1.exon2;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS CDS 1006 1103 . - 0 ID=cds.g7348.t1;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS exon 641 714 . - . ID=g7348.t1.exon3;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS CDS 641 714 . - 1 ID=cds.g7348.t1;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS exon 379 454 . - . ID=g7348.t1.exon4;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS CDS 379 454 . - 2 ID=cds.g7348.t1;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS exon 190 244 . - . ID=g7348.t1.exon5;Parent=g7348.t1 NODE_4413_length_1655_cov_29.5494 AUGUSTUS CDS 190 244 . - 1 ID=cds.g7348.t1;Parent=g7348.t1 #PROT g7348.t1 g7348 GGKILVGGKTIDGPGNFVQPTIALVKHDMPIVQHETFVPVLHVMKFKTLDEAISWNNEVAQGLSSSLFTKNPQNMNKWLGPSGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGREAGSDSWKQYMRRATCTINYSDKLPLAQGIKFE* # PASA_UPDATE: g7739.t1, single gene model update, valid-1, status:[pasa:asmbl_8774,status:3], valid-1 NODE_669_length_19285_cov_43.5188 . gene 8156 10254 . + . ID=g7739;Name=g7739.t1 NODE_669_length_19285_cov_43.5188 . mRNA 8156 10254 . + . ID=g7739.t1;Parent=g7739;Name=g7739.t1 NODE_669_length_19285_cov_43.5188 . five_prime_UTR 8156 8310 . + . ID=g7739.t1.utr5p1;Parent=g7739.t1 NODE_669_length_19285_cov_43.5188 . exon 8156 8894 . + . ID=g7739.t1.exon1;Parent=g7739.t1 NODE_669_length_19285_cov_43.5188 . CDS 8311 8894 . + 0 ID=cds.g7739.t1;Parent=g7739.t1 NODE_669_length_19285_cov_43.5188 . exon 9014 10254 . + . ID=g7739.t1.exon2;Parent=g7739.t1 NODE_669_length_19285_cov_43.5188 . CDS 9014 9881 . + 1 ID=cds.g7739.t1;Parent=g7739.t1 NODE_669_length_19285_cov_43.5188 . three_prime_UTR 9882 10254 . + . ID=g7739.t1.utr3p1;Parent=g7739.t1 #PROT g7739.t1 g7739 MAHHLFCPPLKATTDIDFSSKLAVTATDAAGKDLLRSLNEARRELIKALSNWDLKADAFAAVSSKYISLLRGFTDPTDAPTGAQADEEKTAAPIADASAEEKSAAPADKEGKDAKESKDGKGKGDKAKDGKGKGEKAKDGKPEAPKAVPAAPFADNAMRHLVQFTWTNTLGTIPQTTQCDAQFELVSMLEDMAIWHAKRAIKILADTEADEDVTKEAFSLLKVGAGILFHIEQSELARLREPGKSTDTSPIVVRAYAHQQIAEAQEIVLFRAVAKKNAPKLIAQLALDTGAKYTRALTDVRGIEAKGKTDKWRGYLEYKQLAMEAFGRAHAAAELLVEDKCGAAIAVARTADATWKKALAACDVHFAAEPKTQGSAQAAPPIARTERIIREISAKATRENDFVYFQKVPEDVPALPEAKGLTDPTPYELPARSELWARGPYGGLHPGKAIPPKEIRGESAEAIVPMGDAKSTSDGTFDLCTLL* # ORIGINAL: g7741.t1 original gene structure, not modified by PASA NODE_669_length_19285_cov_43.5188 AUGUSTUS gene 14052 17384 . - . ID=g7741;Name=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS mRNA 14052 17384 . - . ID=g7741.t1;Parent=g7741;Name=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 17322 17384 . - . ID=g7741.t1.exon1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 17322 17384 . - 0 ID=cds.g7741.t1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 16426 17115 . - . ID=g7741.t1.exon2;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 16426 17115 . - 0 ID=cds.g7741.t1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 15952 16074 . - . ID=g7741.t1.exon3;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 15952 16074 . - 0 ID=cds.g7741.t1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 14896 15557 . - . ID=g7741.t1.exon4;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 14896 15557 . - 0 ID=cds.g7741.t1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 14452 14671 . - . ID=g7741.t1.exon5;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 14452 14671 . - 1 ID=cds.g7741.t1;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 14052 14156 . - . ID=g7741.t1.exon6;Parent=g7741.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 14052 14156 . - 0 ID=cds.g7741.t1;Parent=g7741.t1 #PROT g7741.t1 g7741 MAPSDDDDCVIVGVFVPEADKARTNARPPPAAATRVSPSRRFKSLSPTPPPLAPALPLAPTFAPASNATGFGRTDSTGIGAHTRQPIESDEDEEFVDLTQFLRSAPDTRSTGNSTTAGHVPPRTVSDTTHLRAHRNDAAGASALSSFSISANVSGLTDSDGSDGDLLDPLEEWRSQKAKRSLSGLAVGGVAAKRRRSSEGTALAGGDYHGDGGAYGHGGAADGGAPKRRPRNETTTPEERELAKLAAAREKERLKAVRQLEKEEAAEAKRRERELARIEKHRELERQKIVKAAQKEASRAHKPEEAVKDMTVLIDTALLRDTNFASAVSTALNAVGAQWRGEQAQHPGCLCFQRTKKFFFDDAAPARAPGVARGDVIALEPDVMHRVVAADFAKIANDHVVLGELARNLKAAFPGFAVTVVVEGLDRHYRTLKNASTGEFRQAVLRTMGVGGGRDDEQPSRVKNARREIEDALVWLETDGGLFVRKTESVGDTGLLLAMHTKALGMKPFTDLKMLADVFSFEAAAHRRTSNIPIEAWRRQLEQFSGMSEHTAAELSRHFPSPRSLYDAYLARRSQAERIALIAEISVNRAQSGTSRRIGPAMAERLLTLFMSIDGTQMVK* # PASA_UPDATE: g7737.t1, single gene model update, valid-1, status:[pasa:asmbl_8775,status:12], valid-1 NODE_669_length_19285_cov_43.5188 . gene 327 3099 . - . ID=g7737;Name=g7737.t1 NODE_669_length_19285_cov_43.5188 . mRNA 327 3099 . - . ID=g7737.t1;Parent=g7737;Name=g7737.t1 NODE_669_length_19285_cov_43.5188 . five_prime_UTR 2915 3099 . - . ID=g7737.t1.utr5p1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 2708 3099 . - . ID=g7737.t1.exon1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 2708 2914 . - 0 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 2332 2415 . - . ID=g7737.t1.exon2;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 2332 2415 . - 0 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 2065 2149 . - . ID=g7737.t1.exon3;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 2065 2149 . - 0 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 1582 1672 . - . ID=g7737.t1.exon4;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 1582 1672 . - 2 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 1129 1324 . - . ID=g7737.t1.exon5;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 1129 1324 . - 1 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 636 765 . - . ID=g7737.t1.exon6;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 636 765 . - 0 ID=cds.g7737.t1;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . exon 327 431 . - . ID=g7737.t1.exon7;Parent=g7737.t1 NODE_669_length_19285_cov_43.5188 . CDS 327 431 . - 2 ID=cds.g7737.t1;Parent=g7737.t1;3_prime_partial=true #PROT g7737.t1 g7737 MDDRADEPLLEAEERTPRKQGVLEKLKISPSSFRLGLLLVAVVLIGTTNRVTFKIMQYASINYSYFDSQFTTFMYIPISFIVIWIKIRFTNDITPEQRSFPQYKFAIMGFLDSMAGLLSVVGGRQVPGMMQNLLTQGVVPVTMLMSILCLRPRGCSTCRSARAFLQKHKVKFNEESLLPQECTDTECKSWVLINGTSVKGSDTRNLETLIAKELPSTLTYQATLYTSAKAWNKHFREFYTVPQYLGALIILCGLLVSVWPAVTGGNGAGPALWDMIFFTNTIPTALSSVYKEIAFRSVE # ORIGINAL: g7740.t1 original gene structure, not modified by PASA NODE_669_length_19285_cov_43.5188 AUGUSTUS gene 10275 13014 . - . ID=g7740;Name=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS mRNA 10275 13014 . - . ID=g7740.t1;Parent=g7740;Name=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 12579 13014 . - . ID=g7740.t1.exon1;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 12579 13014 . - 0 ID=cds.g7740.t1;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 11656 12335 . - . ID=g7740.t1.exon2;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 11656 12335 . - 2 ID=cds.g7740.t1;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 11237 11396 . - . ID=g7740.t1.exon3;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 11237 11396 . - 0 ID=cds.g7740.t1;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 10796 11054 . - . ID=g7740.t1.exon4;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 10796 11054 . - 2 ID=cds.g7740.t1;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 10275 10524 . - . ID=g7740.t1.exon5;Parent=g7740.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 10275 10524 . - 1 ID=cds.g7740.t1;Parent=g7740.t1 #PROT g7740.t1 g7740 MGHMEETSARIRSFLSRLKPESFWRSIEGRAEGSPAFASLALHLRTLDARRSPKADALVHIASEIETLLRQGESAGVHATHTASHEGADSCDGALAVAAEVVAAKAAVRLVEVVFDEIVAETMRLGEKMSYWEDQAVLPELFVVQDAPVRLASLLFSGSRDWRRVRYLARDSRGHLAHKVDGIRRLRDRHALWLGKLAELSELTSSHAPARRIIAECVRLLIPIVTNSAVTPGGGVPTDAPVVAMKPASAAAPEESESDTRALTEQLVLLARASTELRGRLQALSDEFSRPPALERYWLPVTTVAVVGYLSVSSAVVRRRDIAQYAVALRDSAQNILREWVVRPAMHIYSIVRYDRSDIQLLGARSLQSDVESLERMVTDYARDVLSMTPAELAAVGIAAREGDLSPVMYGYEKDIKAPVKALVLGTMLRTLLIQVQKTKVDIEKAMASLDKLMRANELNFELLATIPALWAMRFLYTKGSDMLRRRSGLRSKSYHDRIRLLLRHVESSAVHRDAERMINNASTLDPPKSPMEVEGHVLIMCHELRVLARNLPRGETRRTFLEDVRDVELLRGDGTRRLRVLERMARTHAFLRP* # ORIGINAL: g7738.t1 original gene structure, not modified by PASA NODE_669_length_19285_cov_43.5188 AUGUSTUS gene 3698 7707 . - . ID=g7738;Name=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS mRNA 3698 7707 . - . ID=g7738.t1;Parent=g7738;Name=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 7687 7707 . - . ID=g7738.t1.exon1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 7687 7707 . - 0 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 7532 7578 . - . ID=g7738.t1.exon2;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 7532 7578 . - 0 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 6657 7426 . - . ID=g7738.t1.exon3;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 6657 7426 . - 1 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 6306 6396 . - . ID=g7738.t1.exon4;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 6306 6396 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 5967 6157 . - . ID=g7738.t1.exon5;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 5967 6157 . - 1 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 5675 5830 . - . ID=g7738.t1.exon6;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 5675 5830 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 5303 5431 . - . ID=g7738.t1.exon7;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 5303 5431 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 5059 5150 . - . ID=g7738.t1.exon8;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 5059 5150 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 4903 4957 . - . ID=g7738.t1.exon9;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 4903 4957 . - 0 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 4578 4790 . - . ID=g7738.t1.exon10;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 4578 4790 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 4151 4235 . - . ID=g7738.t1.exon11;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 4151 4235 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 3894 4045 . - . ID=g7738.t1.exon12;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 3894 4045 . - 1 ID=cds.g7738.t1;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 3698 3786 . - . ID=g7738.t1.exon13;Parent=g7738.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 3698 3786 . - 2 ID=cds.g7738.t1;Parent=g7738.t1 #PROT g7738.t1 g7738 MPLPPLQGMARSVALPPLNPINAPLAQPGGSLAPLRRPETLGAREPDGGSSSPMDVHNAASPPPPLNSTHTRDQSEDGSGDEGFQDLNEDAHSEHSGGDSHPQADENAEREYLAQYTDEDEEVARVQAKAESAAPHAQASRIHDVPNVATVPLAAAVAQPATSAPRSNSRQRRRQEKATSRVPSQDSVAMSEAGRTASVSTTIGAEGVPSAFRRTRNGTAEQFHDDVSSRGGGADDESDGRSIASGVKGNGMGAAADERAARLKARRAARGNRLRSTSPSHQSVTSDTPVAQSTPAYAPRARAAADRRRSSIDEEAGEEDAQEEGEDERDDERDDRQYEQNEEPQEARGAVAYSARASGTRRLLDSFQASQGEVEYPGAISDGAESGYTASFGGQELQKMSRREREAKRRSQRPVEARESGGDGAAIGNVFIPEEDVIEVAKMTDFALATGATQMAPTSRPQDVLYMEEMNGFKKVKRGDEHLYDDTEVEPVSATSFVRGVVSAHLRLGMFAEGLLGGAALFQGYVSYSQDDSNIKLIAFYYPLARAVQTFYFVLLVCALVAACDRYERMHVARSRWGRRAASVFAIIAYALALLFSLGASAIDSHIYEYGDIPTYWASGGQYANEVRPWRALNILRMALSLFGWALVAYSSVDETSIPAQPKQQQQGVPRKGWSTPDPPPLASAASGSRRRPIVV* # ORIGINAL: g7742.t1 original gene structure, not modified by PASA NODE_669_length_19285_cov_43.5188 AUGUSTUS gene 17893 18793 . + . ID=g7742;Name=g7742.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS mRNA 17893 18793 . + . ID=g7742.t1;Parent=g7742;Name=g7742.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 17893 18007 . + . ID=g7742.t1.exon1;Parent=g7742.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 17893 18007 . + 0 ID=cds.g7742.t1;Parent=g7742.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS exon 18159 18793 . + . ID=g7742.t1.exon2;Parent=g7742.t1 NODE_669_length_19285_cov_43.5188 AUGUSTUS CDS 18159 18793 . + 2 ID=cds.g7742.t1;Parent=g7742.t1 #PROT g7742.t1 g7742 MLFSASAFAGEVVAVTGASRGIGLATATLLARAGASVAVLSRQGDAVRAVAKALSASTATAHVGVQCDVSSADSVNRAFAEVTEAIGVPTMVVHAAGINHDSLLVRVGDADALNVVQTNLLGGVYVSRAAVKGMLRARRGSIVLVGSAVAGAGNAGQSVYAATKAGLVGLTRSLAREVGPRGVRVNLVAPGFVTTDMTHSMTEAARLSAVSRIPMGRFGETAEIAETIAFLLRASYVTGHVLVADGGLS* # PASA_UPDATE: g3160.t1, single gene model update, valid-1, status:[pasa:asmbl_4709,status:12], valid-1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . gene 4392 5427 . + . ID=g3160;Name=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . mRNA 4392 5427 . + . ID=g3160.t1;Parent=g3160;Name=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . five_prime_UTR 4392 4505 . + . ID=g3160.t1.utr5p1;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 4392 4518 . + . ID=g3160.t1.exon1;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 4506 4518 . + 0 ID=cds.g3160.t1;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 4659 4766 . + . ID=g3160.t1.exon2;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 4659 4766 . + 2 ID=cds.g3160.t1;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 5048 5427 . + . ID=g3160.t1.exon3;Parent=g3160.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 5048 5427 . + 2 ID=cds.g3160.t1;Parent=g3160.t1 #PROT g3160.t1 g3160 MATPMSPRMRNRASSDATALYRGGSRLQRLRGKGDKIAEAEDGDSPLSNPPPPASAPSWLSSLNQHLSKKMQHQQHMAKLHQVHDQVQRELGDSENNALSNGDGVTAGSPDPTAPEAENYMAVIGGRRVSVVPVSQSLNDMRNLASSAIGEVRKTIAHTRAQAVDV* # PASA_UPDATE: g3158.t1, single gene model update, valid-1, status:[pasa:asmbl_4711,status:12], valid-1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . gene 233 1688 . - . ID=g3158;Name=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . mRNA 233 1688 . - . ID=g3158.t1;Parent=g3158;Name=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . five_prime_UTR 1633 1688 . - . ID=g3158.t1.utr5p1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 1585 1688 . - . ID=g3158.t1.exon1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 1585 1632 . - 0 ID=cds.g3158.t1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 1331 1396 . - . ID=g3158.t1.exon2;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 1331 1396 . - 0 ID=cds.g3158.t1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 1034 1159 . - . ID=g3158.t1.exon3;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 1034 1159 . - 0 ID=cds.g3158.t1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 452 544 . - . ID=g3158.t1.exon4;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 452 544 . - 0 ID=cds.g3158.t1;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 233 247 . - . ID=g3158.t1.exon5;Parent=g3158.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 233 247 . - 0 ID=cds.g3158.t1;Parent=g3158.t1 #PROT g3158.t1 g3158 MFRLPSLARNVAAKAGRVHQQVRAGHFGRPLDAAKIAELTKAYPVVDHTYDAVVVGAGGAGLRAAFGLVQNGFKTACITKLFPTRSHTVAAQGGINAALGNMHKDDWQWHMASFS* # PASA_UPDATE: g3159.t1, single gene model update, valid-1, status:[pasa:asmbl_4708,status:12], valid-1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . gene 2676 3288 . + . ID=g3159;Name=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . mRNA 2676 3288 . + . ID=g3159.t1;Parent=g3159;Name=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . five_prime_UTR 2676 2770 . + . ID=g3159.t1.utr5p1;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 2676 2793 . + . ID=g3159.t1.exon1;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 2771 2793 . + 0 ID=cds.g3159.t1;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 2966 3011 . + . ID=g3159.t1.exon2;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 2966 3011 . + 1 ID=cds.g3159.t1;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . exon 3113 3288 . + . ID=g3159.t1.exon3;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . CDS 3113 3277 . + 0 ID=cds.g3159.t1;Parent=g3159.t1 NODE_2643_length_5560_cov_39.8445_potentialcontaminant . three_prime_UTR 3278 3288 . + . ID=g3159.t1.utr3p1;Parent=g3159.t1 #PROT g3159.t1 g3159 MGSPITSIYRWQGKLEEGSEIMIMIKTTKACMPGITDYVKANHPYEVPEIIQVPIQGGLHAYLGWIDENTQTPVAPS* # ORIGINAL: g2836.t1 original gene structure, not modified by PASA NODE_6589_length_539_cov_67.9397_potentialcontaminant AUGUSTUS gene 1 152 . - . ID=g2836;Name=g2836.t1 NODE_6589_length_539_cov_67.9397_potentialcontaminant AUGUSTUS mRNA 1 152 . - . ID=g2836.t1;Parent=g2836;Name=g2836.t1 NODE_6589_length_539_cov_67.9397_potentialcontaminant AUGUSTUS exon 1 152 . - . ID=g2836.t1.exon1;Parent=g2836.t1 NODE_6589_length_539_cov_67.9397_potentialcontaminant AUGUSTUS CDS 1 152 . - 0 ID=cds.g2836.t1;Parent=g2836.t1 #PROT g2836.t1 g2836 MSAFLKMGGKEYLGGQFRWKRDSRLNFRVELWNGSMVITTFEIKANELIV # ORIGINAL: g3028.t1 original gene structure, not modified by PASA NODE_5063_length_1045_cov_67.1546_potentialcontaminant AUGUSTUS gene 53 994 . - . ID=g3028;Name=g3028.t1 NODE_5063_length_1045_cov_67.1546_potentialcontaminant AUGUSTUS mRNA 53 994 . - . ID=g3028.t1;Parent=g3028;Name=g3028.t1 NODE_5063_length_1045_cov_67.1546_potentialcontaminant AUGUSTUS exon 53 994 . - . ID=g3028.t1.exon1;Parent=g3028.t1 NODE_5063_length_1045_cov_67.1546_potentialcontaminant AUGUSTUS CDS 53 994 . - 0 ID=cds.g3028.t1;Parent=g3028.t1 #PROT g3028.t1 g3028 MLVNPSDGLEAAGEMYPERVEVVSLSSTSEYEADFMKDCKASDRRFEILLKWLAKNHGRFRYVMSIDSRDYLFLSDPLAQLVKILDQGGYKEADFVSSVGEAYPAGASHHPHYLVTHCLKMWTRSCGGDKCYEKIARSYFTNGEPLAVLNSGHIIGTAVGLLHYYRFHVDMMKESGHKCDLTDQGLFTYYMYGMLQEAGYPHKILVLSTSRSGFTNMPLPHRLARMEVGNGTGYRKAEYTVFDCDGNIVAGLHQYDRYTDYNIFEGNTALSAPWQRSIDDGSFHSHFQTREPRPIVPTEATQPPKKRRRRRRD* # PASA_UPDATE: g5169.t1, single gene model update, valid-1, status:[pasa:asmbl_2689,status:12],[pasa:asmbl_2690,status:12], valid-1 NODE_1811_length_9123_cov_69.9929 . gene 2034 4785 . - . ID=g5169;Name=g5169.t1 NODE_1811_length_9123_cov_69.9929 . mRNA 2034 4785 . - . ID=g5169.t1;Parent=g5169;Name=g5169.t1 NODE_1811_length_9123_cov_69.9929 . exon 4171 4785 . - . ID=g5169.t1.exon1;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . CDS 4171 4785 . - 0 ID=cds.g5169.t1;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . exon 2853 3962 . - . ID=g5169.t1.exon2;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . CDS 2853 3962 . - 0 ID=cds.g5169.t1;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . exon 2646 2748 . - . ID=g5169.t1.exon3;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . CDS 2646 2748 . - 0 ID=cds.g5169.t1;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . exon 2034 2512 . - . ID=g5169.t1.exon4;Parent=g5169.t1 NODE_1811_length_9123_cov_69.9929 . CDS 2034 2512 . - 2 ID=cds.g5169.t1;Parent=g5169.t1 #PROT g5169.t1 g5169 MVCINPLEGSWVRRWASRWAASCSAATRGTASQYANLSNVSSADPAFGFHAYDTDSEEGKSARASAFHKPKGPMDIGIWPEIRSRVPKYVDPESIPVDKLPKPSIWELLKLCGFVSKPLIVMFTLCFVEDLLSLATPYINGRIMQSMVDIAAPYVSPPVNGTVVPNAEAYDKFVQYLIVNINISIINASLAFVNGYLAYWIGMVNMTYASISLPSGLSLRTSGLHGPNGERALGLGAHGWYERRLIASPVDVADRCTPLQQTLLIAGASGSGKTLLINCMANILARVDVEDSTPGTREFCSWTTESRAVAMDAERLAELIAACKGARASSTSGAPALPVSPNWASPVGGLSPLATSAAPLLQVFGSPQDALVVCFTSRAAARAALCAHFVGAGRGDAVNDMAPLGDALCCIAELCGGRRPTSVIEALRDLPMLDNAFAYVPNTGSRARDRSLVYEMQADLATGDSGIGAAIVETHMALATPRNSPYPKLAFLEIPGLYADGSYRDGVVARYPFSMHSTVVLTLKPGKIINEFAQDLIKTRLFERLESQQPFLRIVVALNLVVANAAAVNVQLCAKESNVALVKRAARVPGSSLAAADSNVLVQRWLDDGRQRAGAGDDRLALAGVLQRLLESPEYQELPEKLASAAYADLAAHTVTAAEHEASVEASGLRGANGKALWATAWAVRRLGVLEDGSVPAGVRDERLFLALFDPVRCTDAMVSCSSRLHGAAREAVALLNARLNACLQDAPEVVAAAGSSSASGPSSRIWA* # PASA_UPDATE: g5170.t1, single gene model update, valid-1, status:[pasa:asmbl_2685,status:3], valid-1 NODE_1811_length_9123_cov_69.9929 . gene 6091 7926 . + . ID=g5170;Name=g5170.t1 NODE_1811_length_9123_cov_69.9929 . mRNA 6091 7926 . + . ID=g5170.t1;Parent=g5170;Name=g5170.t1 NODE_1811_length_9123_cov_69.9929 . five_prime_UTR 6091 6158 . + . ID=g5170.t1.utr5p1;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . exon 6091 6571 . + . ID=g5170.t1.exon1;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . CDS 6159 6571 . + 0 ID=cds.g5170.t1;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . exon 6704 7653 . + . ID=g5170.t1.exon2;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . CDS 6704 7653 . + 1 ID=cds.g5170.t1;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . exon 7746 7926 . + . ID=g5170.t1.exon3;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . CDS 7746 7900 . + 2 ID=cds.g5170.t1;Parent=g5170.t1 NODE_1811_length_9123_cov_69.9929 . three_prime_UTR 7901 7926 . + . ID=g5170.t1.utr3p1;Parent=g5170.t1 #PROT g5170.t1 g5170 MACCNTVQLAAERGHIECMKALRDGGVDVATFSYNFRWDKSAESAIPEERCVFGAQEGGWISRTALHSACAFGHLHLVKWLVENGASVDCEIYEGYGLTPLFCAVYYRRYDIARWLLEAGANPDVCVISPVYKDGEEWSDNKISGTCCGVHGMTPIYVASVKLDLASVRLLLEFGANASLGEDHFCEYNFQSAIPKKNGPLNAAVYETLHLPVDAPQRAVAVDIAKALAAGGADLHAECVLESIATFGLDVLKYFLAAGLSIELSASGCNASLGMLRYFLSHVTNFATSYAGVDTMGFSCAQLSLSDLSEVVGMFLSLGGDINRHSIRYVGQLDRPETLLSSAVESGCLDRVLFLLRCGASPNVCVEGVNLCVNVLLATAWSAHRRNPVARKLEGVHRTICVALVRYGLRWPVQLSLQVWHRRDTIVFSQECSPKLTRVFAFFGAPVESARQYSADGNSYVPTLQHLCRRVIIAHDLKFADPDVGLPQHLVDYLSDIVVNEMLMQ* # PASA_UPDATE: g5168.t1, single gene model update, valid-1, status:[pasa:asmbl_2688,status:12], valid-1 NODE_1811_length_9123_cov_69.9929 . gene 1174 2004 . - . ID=g5168;Name=g5168.t1 NODE_1811_length_9123_cov_69.9929 . mRNA 1174 2004 . - . ID=g5168.t1;Parent=g5168;Name=g5168.t1 NODE_1811_length_9123_cov_69.9929 . exon 1814 2004 . - . ID=g5168.t1.exon1;Parent=g5168.t1 NODE_1811_length_9123_cov_69.9929 . CDS 1814 2004 . - 0 ID=cds.g5168.t1;Parent=g5168.t1 NODE_1811_length_9123_cov_69.9929 . exon 1174 1625 . - . ID=g5168.t1.exon2;Parent=g5168.t1 NODE_1811_length_9123_cov_69.9929 . CDS 1370 1625 . - 1 ID=cds.g5168.t1;Parent=g5168.t1 NODE_1811_length_9123_cov_69.9929 . three_prime_UTR 1174 1369 . - . ID=g5168.t1.utr3p1;Parent=g5168.t1 #PROT g5168.t1 g5168 MAGTLQPMRALARAMLDTAPSRGRTEKRLRLFRSSAPRVRRAAVENAKSQLGNYLTAIRDACFLASRAPPASASTRSTSARRLRGNKGPLMTAEHVHALTRQTPPKAVRSAAVSRAALQRVAQDRLPLPGQGRSLTMAELAAAIRETP* # ORIGINAL: g4104.t1 original gene structure, not modified by PASA NODE_1401_length_11575_cov_24.1859 AUGUSTUS gene 5372 7585 . - . ID=g4104;Name=g4104.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS mRNA 5372 7585 . - . ID=g4104.t1;Parent=g4104;Name=g4104.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 5372 7585 . - . ID=g4104.t1.exon1;Parent=g4104.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 5372 7585 . - 0 ID=cds.g4104.t1;Parent=g4104.t1 #PROT g4104.t1 g4104 MRSTQFVIVVTACLVGIVSAADYTWQGGNLLHDWNNTALWLQGTAPSTTYFPCTGQSVEMPSNSSITVRGRGRAGYLTLSKGIRIQFPTRTTLQVKNSRPNEQWCSVSSIGPTSPPALGSARLPTLVDVFVNRPWSMTLDASTLFIDAGDGESLAFDVTFTPALYTGSATTVSFDPNTRVVSALFPSMRAARLEGVMNGITVTVNARNSNSQPAVQSMVIRPKPDLDVEGIDNAVLQYQSRTLFKSFGSIRVNSPAGRQITVVFVFDRIGDGQFVGGIGSKFKNEADSPITWTCSGSVAAVNDLLNTLIFMPNHFQQNVEIHVTVNDDKGNDPVTGRVYLSNPSPFNTPPRLRYAGSSIKTDNVKFVTGTKFFIDLSESFTDDDVELQGDRLSYRLVYLSPSGRVLSLNDSEVANWGATLDPSTGIFTGTPVLAGGYQFRATATDLQRTSTDAYVNMNVENPPPPVSDKSAANDKQSTTDVIIGFVTAFGSFALAAAAWGFIQLSKQMRTRGNRHLNPLAYYVQRELGMESVGKFTSGHEYGSEAGVHFHENIREIAKEFSGRVEAAAAESTSCGNLAVSKDLLDEWKSLGIEAERTVYKEDAPMLFEMMRAYGELLARSALAIPAIKRSGPIINMRRIKIQLFSGIEPSHFKIFRSDIVDEMLRLVFLAEEQRNLDMARKERLANEDARISGKSNGSGSLRQPRRAIGKATESQEVLELSTSHYERRPSSVLFAAL* # ORIGINAL: g4103.t1 original gene structure, not modified by PASA NODE_1401_length_11575_cov_24.1859 AUGUSTUS gene 2436 3836 . - . ID=g4103;Name=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS mRNA 2436 3836 . - . ID=g4103.t1;Parent=g4103;Name=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 3387 3836 . - . ID=g4103.t1.exon1;Parent=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 3387 3836 . - 0 ID=cds.g4103.t1;Parent=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 3181 3237 . - . ID=g4103.t1.exon2;Parent=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 3181 3237 . - 0 ID=cds.g4103.t1;Parent=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 2436 2837 . - . ID=g4103.t1.exon3;Parent=g4103.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 2436 2837 . - 0 ID=cds.g4103.t1;Parent=g4103.t1 #PROT g4103.t1 g4103 MYRPLVLLALGVLGGALLPLFVTADGVCEIRTTDNDDLVLSTPVGKNIARENAAAIDLDAPVVKYRDANGLKSLLHATFKGLQDSDTAQQATTRSLQTTVGGIQTAVTEMQSDLQVMQNGILKQLQSTIEQLQGNLTMQLQQKVVELSTQNTALQSQITALQAETASLKVAMLCPPNITVSLGSFCAYKSIESAVPWGTAMEVCANRSAHICSAHQMTNLCAHSRDNALPTQPVLDMPFPDEWMFTVERWLSTDRSSSYFNSVGSFKRGTGSCVGDYTLSAVSPMGWTNPNNPLRFICCRGF* # ORIGINAL: g4106.t1 original gene structure, not modified by PASA NODE_1401_length_11575_cov_24.1859 AUGUSTUS gene 10939 11575 . + . ID=g4106;Name=g4106.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS mRNA 10939 11575 . + . ID=g4106.t1;Parent=g4106;Name=g4106.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 10939 11575 . + . ID=g4106.t1.exon1;Parent=g4106.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 10939 11575 . + 0 ID=cds.g4106.t1;Parent=g4106.t1 #PROT g4106.t1 g4106 MCTTSRPWRHAGWRTYFAAVESVVVVSLLIVVLFAVEVSHSAAVTTDIHVGSGVFEWTPLSYTNGSYRIIGDFGASNSTVKCRACLQRSLPLFSLSGSASLAISDISFVGENGNADGVQVLISAIDSTSISIVTSSVSGFTRALNASGDVNVTISSSKFQDNGISKLGNARISTAIMGGVIWASGRASITIDASNFTGNNAGQKAGSYGGVI # ORIGINAL: g4105.t1 original gene structure, not modified by PASA NODE_1401_length_11575_cov_24.1859 AUGUSTUS gene 8531 9938 . + . ID=g4105;Name=g4105.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS mRNA 8531 9938 . + . ID=g4105.t1;Parent=g4105;Name=g4105.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 8531 9133 . + . ID=g4105.t1.exon1;Parent=g4105.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 8531 9133 . + 0 ID=cds.g4105.t1;Parent=g4105.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS exon 9486 9938 . + . ID=g4105.t1.exon2;Parent=g4105.t1 NODE_1401_length_11575_cov_24.1859 AUGUSTUS CDS 9486 9938 . + 0 ID=cds.g4105.t1;Parent=g4105.t1 #PROT g4105.t1 g4105 MRRLTCFAGSLQPSEPVGERIFNVKRGGRSLARFSAMYVLTFALFIAKLTCVTSADNVCEVRTTDNDDLVFSTPPGKSVAFKNAATIDLDAPSVKIIDSTGLKVPLHSLLKSIQDTQQATTASVSTLQSSVADVQALLNLQGVAIKQLLATVSELQANLTALLQARVDDVTRKVATLETTLVGLQVSVAATTSLAQNTSMKLNRTKPFVLAVVDPIVGGTFTGVGTPEYVTGVNVFPQVMGQSPPNFYNPTLGVATIPETGIYSVSVSGRSTSAAYYPCLSVKRVGGGKVYVYTGTMTQTAIFSIAAIPLEVGDKVWISSGSSASAAMSTFGPDADLVLFYAYMSITKVSP* # PASA_UPDATE: g4102.t1, single gene model update, valid-1, status:[pasa:asmbl_1480,status:12], valid-1 NODE_1401_length_11575_cov_24.1859 . gene 128 1374 . - . ID=g4102;Name=g4102.t1 NODE_1401_length_11575_cov_24.1859 . mRNA 128 1374 . - . ID=g4102.t1;Parent=g4102;Name=g4102.t1 NODE_1401_length_11575_cov_24.1859 . five_prime_UTR 1331 1374 . - . ID=g4102.t1.utr5p1;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . exon 1210 1374 . - . ID=g4102.t1.exon1;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . CDS 1210 1330 . - 0 ID=cds.g4102.t1;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . exon 569 907 . - . ID=g4102.t1.exon2;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . CDS 569 907 . - 2 ID=cds.g4102.t1;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . exon 128 264 . - . ID=g4102.t1.exon3;Parent=g4102.t1 NODE_1401_length_11575_cov_24.1859 . CDS 128 264 . - 2 ID=cds.g4102.t1;Parent=g4102.t1;3_prime_partial=true #PROT g4102.t1 g4102 MSDRQHPPPHGGGGAYPPPQSQGAPAAYDQTAYAGYAGYGGAYDGYAGYGQAPAAAGYGQSAGYAQSAPAYGGGASAYGDAKSQGSYSSSAGGYNDRAQGGSYGNAPPSGGYGDRGYGGSRGGEDRSGADRSGADRSGADRSGERDERGGRGADSGREPPPGTKKSEDTVFITGLPTTMSTEELKTKLKEHFGSLGILK # PASA_UPDATE: g5229.t1, single gene model update, valid-1, status:[pasa:asmbl_5324,status:12], valid-1 NODE_2970_length_4626_cov_36.4531 . gene 220 4545 . - . ID=g5229;Name=g5229.t1 NODE_2970_length_4626_cov_36.4531 . mRNA 220 4545 . - . ID=g5229.t1;Parent=g5229;Name=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 4271 4545 . - . ID=g5229.t1.exon1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 4271 4545 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 3512 3788 . - . ID=g5229.t1.exon2;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 3512 3788 . - 1 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 3292 3381 . - . ID=g5229.t1.exon3;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 3292 3381 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 3012 3076 . - . ID=g5229.t1.exon4;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 3012 3076 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 2693 2787 . - . ID=g5229.t1.exon5;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 2693 2787 . - 1 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 2347 2450 . - . ID=g5229.t1.exon6;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 2347 2450 . - 2 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 2036 2103 . - . ID=g5229.t1.exon7;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 2036 2103 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 1683 1797 . - . ID=g5229.t1.exon8;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 1683 1797 . - 1 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 1324 1470 . - . ID=g5229.t1.exon9;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 1324 1470 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 995 1111 . - . ID=g5229.t1.exon10;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 995 1111 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 617 688 . - . ID=g5229.t1.exon11;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 617 688 . - 0 ID=cds.g5229.t1;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . exon 220 391 . - . ID=g5229.t1.exon12;Parent=g5229.t1 NODE_2970_length_4626_cov_36.4531 . CDS 220 391 . - 0 ID=cds.g5229.t1;Parent=g5229.t1;3_prime_partial=true #PROT g5229.t1 g5229 MPVLRDRLNNEMTRTAAVRAVGLIAESPLDLAAVSPALAEAVPIIASFLKRNSRGLRLSCMLALDAIVRRLGSVLPPAVIGGVFAELPSLLADADLQLAHSGLNLISNAIRCQPQLVGDAAVITPNVQALVTLVRSPLLHGPPLDALLNTLRAFIGAGFDKGVLLEQLMQPVRTATAITQLPKQAFHSTAKCIAAVVANTDAQLIVTNFVADVEKPPSDAARLLGLLALGEIGRSTNLSQFTSLKGAILDAFSAQSEEIKSAASLALGALSVGSLPTYLPFIIEEIRTQPKRQYLLLHSIKEIISHQSLTPEGISVLAQFVEQIWRLLFDHCESNEEGTRNVVGECLGKLTLIDPSVLLVELQKQLVSPSQHARATVVTAVKFTIVEQPQPIDALLRPLMGDFLRLIADDDLNVRRLSLILLNSAAHNKPSLVRDILPGLLPAVYAETRVRKELIRVVEMGPFKHTVDDGLDLRKAAYECMYTLLDTCLDRLGIFDFVSYTAEGLKDQYDIRMLAHLMVAKLVSMVPAAVVE # ORIGINAL: g7700.t1 original gene structure, not modified by PASA NODE_2814_length_5073_cov_42.0088 AUGUSTUS gene 4349 5044 . + . ID=g7700;Name=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS mRNA 4349 5044 . + . ID=g7700.t1;Parent=g7700;Name=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS exon 4349 4490 . + . ID=g7700.t1.exon1;Parent=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS CDS 4349 4490 . + 0 ID=cds.g7700.t1;Parent=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS exon 4617 4735 . + . ID=g7700.t1.exon2;Parent=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS CDS 4617 4735 . + 2 ID=cds.g7700.t1;Parent=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS exon 4886 5044 . + . ID=g7700.t1.exon3;Parent=g7700.t1 NODE_2814_length_5073_cov_42.0088 AUGUSTUS CDS 4886 5044 . + 0 ID=cds.g7700.t1;Parent=g7700.t1 #PROT g7700.t1 g7700 MAVTFVSCEGFVKDENDAELLFSAAKEGRVPLVPRRLLAEEKDAIGAGQIYVYDEVAADIQRWTDGKLWCDSSNAGEYLVYKEADPEVREEGNKRVKVPKEGGLRKKTIGDRTPGSHLRLVCYYSADQAWVSSPRSQPF* # PASA_UPDATE: g7699.t1, single gene model update, valid-1, status:[pasa:asmbl_5068,status:12], valid-1 NODE_2814_length_5073_cov_42.0088 . gene 370 3476 . + . ID=g7699;Name=g7699.t1 NODE_2814_length_5073_cov_42.0088 . mRNA 370 3476 . + . ID=g7699.t1;Parent=g7699;Name=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 370 932 . + . ID=g7699.t1.exon1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 370 932 . + 0 ID=cds.g7699.t1;Parent=g7699.t1;5_prime_partial=true NODE_2814_length_5073_cov_42.0088 . exon 1045 1110 . + . ID=g7699.t1.exon2;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 1045 1110 . + 1 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 1337 1460 . + . ID=g7699.t1.exon3;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 1337 1460 . + 1 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 1676 1775 . + . ID=g7699.t1.exon4;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 1676 1775 . + 0 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 2006 2129 . + . ID=g7699.t1.exon5;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 2006 2129 . + 2 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 2310 2390 . + . ID=g7699.t1.exon6;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 2310 2390 . + 1 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 2602 2759 . + . ID=g7699.t1.exon7;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 2602 2759 . + 1 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 2947 3113 . + . ID=g7699.t1.exon8;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 2947 3113 . + 2 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . exon 3232 3476 . + . ID=g7699.t1.exon9;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . CDS 3232 3468 . + 0 ID=cds.g7699.t1;Parent=g7699.t1 NODE_2814_length_5073_cov_42.0088 . three_prime_UTR 3469 3476 . + . ID=g7699.t1.utr3p1;Parent=g7699.t1 #PROT g7699.t1 g7699 TGDGFEQVPMELIDSSLVATVVDANGGSHSAPRDKGKKWWPAGRNGGRGAGVAHSSTHNIDGESDDEEVELFSHEKDTATSPPRFHSHQLQSLHGSGHGSGGRHSNHDDAESALSADGEEGAAASAGAREGDDDDTDDVIDDVHVRGLPVGMDPATVAVEGPNLHSMGELFLGKYLRVIFHFVVILQFLSLLVSYGLAGSEAYGQVLRVTYSYVIPFFIIGCTLAIIFGASVLQIVVSLLTFFKGSLLVLTVGVTAYVGLRVHNTVSDHYAAIGDPILLGSVALGGTPNVMPLMFARIRRTTAELRRFRRFVIAGTFTCLLLNIVWCHSVLAVVPQCNGGYDGVNNCNVSLYKSHKEGEIATVPLIEIIRRDHASVTWIGQLVAIFMMLSITVSFLTMGAALRHTLDGWVAYLLMPSRTSGGPGFCARVLPSWCFAPLSLKSLLYFGSFGIVLLIAQLNPKGFVEVLEKGTSTALNIETGLLLVYMLIMTRRGSFHAIQVPLPLNRVLAAAIYPVFTYSAFIVGFGVYKAIADAVHRGE* # ORIGINAL: g7899.t1 original gene structure, not modified by PASA NODE_2068_length_7859_cov_39.3891 AUGUSTUS gene 1608 7859 . + . ID=g7899;Name=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS mRNA 1608 7859 . + . ID=g7899.t1;Parent=g7899;Name=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 1608 1766 . + . ID=g7899.t1.exon1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 1608 1766 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 1910 1981 . + . ID=g7899.t1.exon2;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 1910 1981 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 2177 2291 . + . ID=g7899.t1.exon3;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 2177 2291 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 2549 2654 . + . ID=g7899.t1.exon4;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 2549 2654 . + 2 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 2900 3374 . + . ID=g7899.t1.exon5;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 2900 3374 . + 1 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 3587 3996 . + . ID=g7899.t1.exon6;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 3587 3996 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 4190 4506 . + . ID=g7899.t1.exon7;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 4190 4506 . + 1 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 4654 5252 . + . ID=g7899.t1.exon8;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 4654 5252 . + 2 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 5588 5733 . + . ID=g7899.t1.exon9;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 5588 5733 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 5856 5988 . + . ID=g7899.t1.exon10;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 5856 5988 . + 1 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 6442 6579 . + . ID=g7899.t1.exon11;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 6442 6579 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 6883 7001 . + . ID=g7899.t1.exon12;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 6883 7001 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 7139 7238 . + . ID=g7899.t1.exon13;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 7139 7238 . + 1 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 7351 7509 . + . ID=g7899.t1.exon14;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 7351 7509 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS exon 7676 7859 . + . ID=g7899.t1.exon15;Parent=g7899.t1 NODE_2068_length_7859_cov_39.3891 AUGUSTUS CDS 7676 7859 . + 0 ID=cds.g7899.t1;Parent=g7899.t1 #PROT g7899.t1 g7899 MVEGKRKRAHPAADEEEDADLGDSSDATVENDGSRRSQARKVRIVAEENPAEEESDGEDAAAESAMTQQVEQEMRQEQQPANGVITYVTLKNFLCHQYLEVPLSNNVNFITGRNGSGKSAIMTAIIVCLGGKASATGRGESLKDLVKTGTTQAVVTLCLRNEGREAYCPDVYGKAIIVERTIRKEGAADYKICSGKLDKGSNRMIASVVISRKKDELTNILDYFGIQIDNPVSVLNQDTSREFLNNAGPKQKYQFYMKATELDKMCGDYKYIAEQAEVIRATTTEKEASLAVMKKEVNDLRQKYKDAEKVRDLAGQRDRLKEQYAWVLITDMEAIVEKEKRDRAKMEGRREKHVGELAAFDEKMTDADGKAKAIEDVIAAKTTSLEQHTSQQERVRAESKAARTHVTELQSALADAKRKVQAEKRQHDATEKRIAEIQSKSNRNIEAERAARIRKIDEREEKIARFTAELEELYRRKEELEGLLSAKQTEIDNARRVVDDCNDDVRKMGSRIDSLRKQKQDALAKFGPFVSDIVKRINAERGFKRPPLGPIGRHIKLKDAKWARAVEAHLRDLPAGFLVSCDQDGKLLRRIFEQAIPRNQKYPQVIVDSHGDYMRARFDIGNERAPRGFTSILDVIETDDIAAYNLVVDRNGAKAVLFEQRDKASAAMDHAPPHVEVALTIEGDRITNQGGGKMHLSNKYDGPTKLGGDVDNVLQQTEISLAAAKKELSVAKARLDVLEADLIELNNKSTEIDRQIKSSETMQLRLRRELKDLKDFQEEPLPDTAGLQEELDQYRASMERAQEEVDAIDAQVDGAKQKMKPFEHRMVEIKANIDTIMADIQEQRAALEAQVMDEKKTKLERNKIEDKIRACDKELAAKNARVEELAASLANNLAATTALYPDRKASERSANDLSKEIDFLERRIQLEEKSRGKHEDISREYRTKKEVYKKAKEQLNRTQDFVQKLEDELDYRGRTFKKFQKLTTAKAKVYFINLISKRNYSGKLEFKHKKGELEVKVNPTQGTDENREDTRGLSGGERSYSTICFVLSLWDALESPFRILDEFDVFMVRDCVCGGEI # ORIGINAL: g13726.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 21936 22307 . + . ID=g13726;Name=g13726.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 21936 22307 . + . ID=g13726.t1;Parent=g13726;Name=g13726.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 21936 22307 . + . ID=g13726.t1.exon1;Parent=g13726.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 21936 22307 . + 0 ID=cds.g13726.t1;Parent=g13726.t1 #PROT g13726.t1 g13726 MGVVGITVIMLANLMITSTEGGYLAVFSLSQLSPLAREHPLKGGRTIEVVEVGDIAAKDVDHNAAENVVDSHLTDSAENAQAVVSTSTHHVGIDMNTSGSPQRPLQSPPATLEAQNDAGKYSM* # PASA_UPDATE: g13723.t1, single gene model update, valid-1, status:[pasa:asmbl_5591,status:12], valid-1 NODE_311_length_27272_cov_41.7608 . gene 3400 9988 . + . ID=g13723;Name=g13723.t1 NODE_311_length_27272_cov_41.7608 . mRNA 3400 9988 . + . ID=g13723.t1;Parent=g13723;Name=g13723.t1 NODE_311_length_27272_cov_41.7608 . five_prime_UTR 3400 3546 . + . ID=g13723.t1.utr5p1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 3400 3690 . + . ID=g13723.t1.exon1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 3547 3690 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 3890 4027 . + . ID=g13723.t1.exon2;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 3890 4027 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 4204 5395 . + . ID=g13723.t1.exon3;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 4204 5395 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 5582 5734 . + . ID=g13723.t1.exon4;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 5582 5734 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 6170 6299 . + . ID=g13723.t1.exon5;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 6170 6299 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 6498 6673 . + . ID=g13723.t1.exon6;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 6498 6673 . + 1 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 7043 7087 . + . ID=g13723.t1.exon7;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 7043 7087 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 7493 7603 . + . ID=g13723.t1.exon8;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 7493 7603 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 8061 8212 . + . ID=g13723.t1.exon9;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 8061 8212 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 8408 8534 . + . ID=g13723.t1.exon10;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 8408 8534 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 8838 8911 . + . ID=g13723.t1.exon11;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 8838 8911 . + 2 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 9236 9328 . + . ID=g13723.t1.exon12;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 9236 9328 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . exon 9758 9988 . + . ID=g13723.t1.exon13;Parent=g13723.t1 NODE_311_length_27272_cov_41.7608 . CDS 9758 9988 . + 0 ID=cds.g13723.t1;Parent=g13723.t1 #PROT g13723.t1 g13723 MYMTWAQSLSFPASHFGKRITPLRLVSIVVRHFASFANMLASTSASQPLQALIGDAVSLLQSAKATVSVRVSSLSLPGRVSHASDAPHHSRGHESVHAHSETSPLPNAHIPAHSHVTVASTPVERAHASPLLGHARGRSSDLLAGITGASCPSPSLSAPPTAASLFGSVPAHFLRPPQRLLFDAPSVQNNPFLASSGGAPLLSCASSALPFASFSRRGFATSSAAFAYSNRRAHTASSRGIQQARSVLASLEGISGVSRPTWGVHGGVQGMLSSLVPHRSISFLGGPLDRLEEAAEAEPRNARKQAEYYQELVREDPHAVIRRFESGLYTSNEGCVREYLRALAMTDRLEKANLSSLLTQAASASGAAGAAQTGTASGAGSGGAWTGGAGNEDRPIHVVMTEPGFKAQLWRTARTLFVAFIVISAINAAIDDRGLTKGMAVHNEIVPEIQAQKYRFTDVQGVDEAKDELEEIVEFLRNPQRFTRLGGKLPKGVLLMGPPGTGKTLLARAIAGEAGVPFFYCSGSEFDEMFVGVGARRVRELFAAAKRRAPCIIFIDEIDAMGGTRNPKDQQYVKMTLNQLLVELDGFQQNEGVIVIGATNFPEMLDKALIRPGRFDRHVTVPMPDVKGRRDILGVHSKSVPLSKDVDVNVIARGTPGFSGAELANLINQAALKASIEGAESVNMRHLEYAKDKILMGAERKSAVIDPEQRKLVAYHEGGHAIVAVFSKGAHPLHKATIMPRGRALGMVSQLPEKDDLNYSRQQLLSRLDVCMGGRVAEELIFGHDHITTGASSDFQQASDLAREMVTKFGMSTKVGPILMRDEDIAAASPETKQLIDGEVQLLVRTAYDNALKILKAHERELHRLATALLDYETLTAEEVHLVLKGMPIDKLKATVPTADTGRPKHPSGTADPVHVPAALA* # ORIGINAL: g13722.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 102 2233 . + . ID=g13722;Name=g13722.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 102 2233 . + . ID=g13722.t1;Parent=g13722;Name=g13722.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 102 383 . + . ID=g13722.t1.exon1;Parent=g13722.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 102 383 . + 0 ID=cds.g13722.t1;Parent=g13722.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 668 2233 . + . ID=g13722.t1.exon2;Parent=g13722.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 668 2233 . + 0 ID=cds.g13722.t1;Parent=g13722.t1 #PROT g13722.t1 g13722 IDGFVLYKNIVRTILRAAQNGFEVSEEEANRMEIDYRMYLNIRTDSPYAVARSTLESLRDCGITHIDVGRKPNAVDTKIKSHMTDLYLLGARHPELAKETIVAVISSDRDFASEVRVLRLASFRHVVLVHNASNVRPGLGGHFHSVINNWNAMVDESISPGSAPSTNSYYADDSRPSHQSAAPVAALAPRDPGGHSTPWIYDGGIQPLQQATHPSSSGGMRDVFAASSPQSRDMREASEFARAHVLQLSDAPRATHAATATAPDDGRHWSRGGDGESEHLSPTLHAQMMDWPSMDLRDASRDAARDAFLGGRDDDSAGFEFASGMRRVNTATNASPLGYDTSSGPLSGHDGPFGNQLSGASVPVSIAGKKVVHTFPGMSDAQLAYVRQFFMTELNTDLGRDGFVVRVEYATREVVLWGPSERRHNDSELQQRAKHRVFLALGHVQEEREIKLAMVTRMDVMGDPKIQEIQETYRVFAYASDPDEGGDGHGRVFMRQCPLSWQEQDVRLYLREKHNVYATAVNLRIPPVAKPTFKTAIVTLDKGSHPDLNDVLQRLIGSPIDRQRSTDIRFYPYRPPTQVAKGTTVVICYDMRFQHEIGRSELKRRMMAIEMQAMK* # ORIGINAL: g13725.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 16523 19938 . + . ID=g13725;Name=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 16523 19938 . + . ID=g13725.t1;Parent=g13725;Name=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 16523 16632 . + . ID=g13725.t1.exon1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 16523 16632 . + 0 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 16807 17198 . + . ID=g13725.t1.exon2;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 16807 17198 . + 1 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 17507 17712 . + . ID=g13725.t1.exon3;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 17507 17712 . + 2 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 17887 17974 . + . ID=g13725.t1.exon4;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 17887 17974 . + 0 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 18222 18325 . + . ID=g13725.t1.exon5;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 18222 18325 . + 2 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 18519 18668 . + . ID=g13725.t1.exon6;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 18519 18668 . + 0 ID=cds.g13725.t1;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 18937 19938 . + . ID=g13725.t1.exon7;Parent=g13725.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 18937 19938 . + 0 ID=cds.g13725.t1;Parent=g13725.t1 #PROT g13725.t1 g13725 MYRRMQFAGNPKDVRRFQVAVLISEPAISPRSLLAFSSTMFVHNNSKHGRRVLLASSAAASPTVTSNPRRIAAQLTLPAVSSPSVTSNANHSPTAVTTVAASQSSPSQTHTPASGGPGGAPVHVSSTAPSAGRHMPETEIRPEIARESTGDVAQKRRVGRPSKSDYTEVRIHPSAFEPEILEICPPQGPLGGSQIVTIIGEHFKHGTKVSFGSSPPLPARYISPSAMTILTPRRDEPGEVYVTLWVNGERYGRRPGRYIYAPESLSSPADGMLSESLMAVVDRLSERLPPRQADPPFLRPEDVLTRAVEYIDELRAVVDSFYGQHRAPDASHPQGQQQSQMFRLKGTPLPSATGMRYKSPFPNQHQSQPLPPPSAMSAPPYGGRSYYPGTASAFAHAMLYGGSNGPPKHAYGGYPHPLPPPDFALGQNPRSSPYQSQQLSLEGDEYAYVTRSNAGSRHSGYADAFSERGRGAKRPREADERDYGGRSANAGGMSDSDGDADTDGPKLVSRRGVRTARVTYPGQEMIVNDALYFHEYRPTSSPPLPRGLGAPGSGRSPAAAMPPPPTRDHRASESSAGSDDERGRVDSEYESDEGNEGLGEAQDELTDSDSSDRVHDYQRRVRTRQSSIGKDTRKKSGVEEKIKAVVRRWVAEPQSPLNTTTGPATGDTPAQDLRHAAKKQRKR* # ORIGINAL: g13724.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 12292 15467 . + . ID=g13724;Name=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 12292 15467 . + . ID=g13724.t1;Parent=g13724;Name=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 12292 12294 . + . ID=g13724.t1.exon1;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 12292 12294 . + 0 ID=cds.g13724.t1;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 12509 13589 . + . ID=g13724.t1.exon2;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 12509 13589 . + 0 ID=cds.g13724.t1;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 14359 14486 . + . ID=g13724.t1.exon3;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 14359 14486 . + 2 ID=cds.g13724.t1;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 15327 15467 . + . ID=g13724.t1.exon4;Parent=g13724.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 15327 15467 . + 0 ID=cds.g13724.t1;Parent=g13724.t1 #PROT g13724.t1 g13724 MSQEGVDELTTVAAAGSLLVTPAAVDGRTLAVATEDRHRPTGSDHRALVRDSETRHDVHMTTNEVGADSHSAPPADHREATTTVSTTAAITLDNVGSTKSCESTLDQGEPPADSKPAPNTATLQTRSDLVHPPSTTTILAHGEHVTDARDSDANNSCCVDRTVTESSAADASTLALKAARALGHSTDARDGDGDASDVDVVMSDAAVGDKAEPREGDAHVHDGASASSELDATANETGAPTTNSAAAVHLQLGGIDTNSDNVSSAVPQPVRQIVFSNETNAVVAAHAAGSATRGRGRPPTDPCLGSRPSEVFRIITETGKSPIVSAVFVENPPDSLRKSNFFYFTITFKDKSNQTIRVDYAKFEEFVETTETTMPDRRRTLARNGLRYTLRGVSNDPTPTIWEESLFIRLVDATPEHNIIVYEGQDRVPELHKVLLTHESICTRCVEKRQ* # ORIGINAL: g13727.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 23220 24713 . + . ID=g13727;Name=g13727.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 23220 24713 . + . ID=g13727.t1;Parent=g13727;Name=g13727.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 23220 24713 . + . ID=g13727.t1.exon1;Parent=g13727.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 23220 24713 . + 0 ID=cds.g13727.t1;Parent=g13727.t1 #PROT g13727.t1 g13727 MANATVFAGMRHYLSAFVLPGERLRFGIIARDGKGNARRCGGDSFQVRLEGPSLYAGQAEDNLDGTYSFSAVLFDEGDYEVRARLDFTACEGSFRCVADENVNKTMVAQYIRGLDDGGGPVIIRVRRVLPAEDKRRLLIASTAAHRTAGDDGIVRVEEGSGSCGARFAPNTPIHDPSMRVGRWYNRTMLCGTPGQIPGMKSVSDSPQMSMPPVAHARDDRRCDSPFFSGPYIWVPMDSARPVLPVQSCRDVWLHFVGDSMTRNNFMRLNDIFDATLGAPVERMAFLRIGANGITRRQVRHFSELWAEERVIHMWTRYSSHNVTLTNSFITPYVEFSREMIRLNALPANANSTDPLTPDDSRVPTHLFMNTGLHNVCGPPEWHAQYPDFVGDFLSRFQRDYPRSRTAHFWITTTLTQFTAQQMPRLHRCATSDRINAVGDYAADVALRANVTRVWDYYQFSAGRHDATRDNRHYNNDVMSFMVDELLNMVCVCNKKVT* # ORIGINAL: g13728.t1 original gene structure, not modified by PASA NODE_311_length_27272_cov_41.7608 AUGUSTUS gene 25135 27235 . + . ID=g13728;Name=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS mRNA 25135 27235 . + . ID=g13728.t1;Parent=g13728;Name=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 25135 25224 . + . ID=g13728.t1.exon1;Parent=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 25135 25224 . + 0 ID=cds.g13728.t1;Parent=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 25456 25595 . + . ID=g13728.t1.exon2;Parent=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 25456 25595 . + 0 ID=cds.g13728.t1;Parent=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS exon 25924 27235 . + . ID=g13728.t1.exon3;Parent=g13728.t1 NODE_311_length_27272_cov_41.7608 AUGUSTUS CDS 25924 27235 . + 1 ID=cds.g13728.t1;Parent=g13728.t1 #PROT g13728.t1 g13728 MAGMEPSGQTVPGANGADEKKTTKACRQSHLTITVHKATNLRGSRGDTLNTYARIEFPQKGVADSPVVQETRNPDFKFVHTLDLTLDETTMSDLASHALVVTIVEQLPKERTSVLGTARIDLLPLILQGKTSILETVAIQTSTDTDAPAEVTIEASVPAPLLTEQERKHGGVLTLKCDGLFSVPETWGGKDAANYTYNLSLALPGERIVQLVSGLHAATGDSKQQVSAADVSAEIGERFGDMRPDDSLFRHECESAKPRIHWPCVRRCYLPPDGWVRLRHAVIAGNALPIEISRSTTMKTGDPSPQRGMMFIHTTAFLTPGTMSVRGGFFVKPHDEGDEKRPHSRSRDLLGEIERAPSRLTLPTFPLSTTPLANMASTASVAAAAPAPAPAPPAGKKAPAGKGKGEHAEPVNDIRAYLDCKTYAVVEVSLSIPLVPKRPPVAIKNVADYIPQRSAFPRLGEGSQKAIDDYREQVMSIADSLAEEFRGLFSGDGSREDDMTTDERRRKLLFELNT # PASA_UPDATE: g4123.t1, single gene model update, valid-1, status:[pasa:asmbl_181,status:3], valid-1 NODE_1048_length_14427_cov_43.3404 . gene 582 2867 . - . ID=g4123;Name=g4123.t1 NODE_1048_length_14427_cov_43.3404 . mRNA 582 2867 . - . ID=g4123.t1;Parent=g4123;Name=g4123.t1 NODE_1048_length_14427_cov_43.3404 . five_prime_UTR 2720 2867 . - . ID=g4123.t1.utr5p1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 2600 2867 . - . ID=g4123.t1.exon1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 2600 2719 . - 0 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 2222 2352 . - . ID=g4123.t1.exon2;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 2222 2352 . - 0 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 1935 2112 . - . ID=g4123.t1.exon3;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 1935 2112 . - 1 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 1562 1721 . - . ID=g4123.t1.exon4;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 1562 1721 . - 0 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 1251 1410 . - . ID=g4123.t1.exon5;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 1251 1410 . - 2 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 914 1093 . - . ID=g4123.t1.exon6;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 914 1093 . - 1 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . exon 582 822 . - . ID=g4123.t1.exon7;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . CDS 750 822 . - 1 ID=cds.g4123.t1;Parent=g4123.t1 NODE_1048_length_14427_cov_43.3404 . three_prime_UTR 582 749 . - . ID=g4123.t1.utr3p1;Parent=g4123.t1 #PROT g4123.t1 g4123 MTEVDFPNEFELSNPPSDGISSVRFGPTHANFLLASSWDTSVRLYDVPNKILRATFHHSSAALDICFTDNTHGASAGLDKAVKYYDFNAHSERVLGYHGEGIRCIDYFGAGQLIVTGSWDQTVKLWDVRSPQPCVATSQQPGKVFSISAADEKLIVGTAGRHVYVWDMRNMDRELQQRESSLKFQTRCIRSSPDAQGYVLSSIEGRVAVEFLDPSPEIQKRKYAFKCHRKADANGVQTIYPVNSIAFHPIHGTFATGGSDGIVNVWDAVNKKRLCQFHQYPASIASLSFSADGSMLAIASSYTFEEGEKDHAPDSIIIRMVTPAETKSTARAV* # PASA_UPDATE: g4125.t1, single gene model update, valid-1, status:[pasa:asmbl_182,status:12], valid-1 NODE_1048_length_14427_cov_43.3404 . gene 9329 14158 . - . ID=g4125;Name=g4125.t1 NODE_1048_length_14427_cov_43.3404 . mRNA 9329 14158 . - . ID=g4125.t1;Parent=g4125;Name=g4125.t1 NODE_1048_length_14427_cov_43.3404 . exon 14003 14158 . - . ID=g4125.t1.exon1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . CDS 14003 14158 . - 0 ID=cds.g4125.t1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . exon 12043 13802 . - . ID=g4125.t1.exon2;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . CDS 12043 13802 . - 0 ID=cds.g4125.t1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . exon 11739 11894 . - . ID=g4125.t1.exon3;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . CDS 11739 11894 . - 1 ID=cds.g4125.t1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . exon 11345 11482 . - . ID=g4125.t1.exon4;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . CDS 11345 11482 . - 1 ID=cds.g4125.t1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . exon 9329 11085 . - . ID=g4125.t1.exon5;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . CDS 9855 11085 . - 1 ID=cds.g4125.t1;Parent=g4125.t1 NODE_1048_length_14427_cov_43.3404 . three_prime_UTR 9329 9854 . - . ID=g4125.t1.utr3p1;Parent=g4125.t1 #PROT g4125.t1 g4125 MYELEDIDWERMDFTDGQACLDLIGSKSMALLALVDEECMVPKGSDSGFVEKANKLHAQNPLYRVKPGSKETFGLHHFAGTVYYNTSGFLEKNRDAVDPSAIALLGESASEMVRRIATAAAAADEAQKDFSASMGRSKKPRSVGGQFRESLRVLMENLSTCNPFFVRCIKPNRQLKGGWFDGEFVRKQLNYLGLLETVRVRKAGYPVRYTFGEFRRKFSALMPRAKRRVSLTVSGVLAASKDLCQTLLDNLSPYLASVKGASGANSPRVPSSPRTPTTPSTPTGGLHIALPTGPPVPAAGYRVGRTRVFMGMEQEAALDRLLCVVYTRAAQKIQRAFRVFWAQRRDRSARIVTGAIRAFSYRRRFVLTRAAAVCFQAHIRGWKARKVCVQLRKDAAERAAQAQAQAARIASAAAASAAATPSPKPADTTEAASPAVNEDSTPDVAHAAVATSRRISRAYEVRRSIDHARIASITPTPVTDERVDATATACTSSSSPTTQRAMEHTPTAIKRSSIISRKQSQRSGNRSSMISISSVASDGAEGGDSVGPLEDPREAGLLWVLRRPSVRQKIPQRPLLAETDGYVAEKVSVMGGRRGAKLIGTTRDNRWWRHFFAGHSHASLSTIHPTLGTIIVSIVKREDEESDVARPDEPTHRTIVWTKFGFGLAAFTPPVLAGHDKSRIIKKWGKKAAAGGPEWALECASREFSDTLGRDFVFDVEASTFVDYPGSEARLLQLEDDNHIFYYPRQYKFGVLYAKDGQTNEVDMFSNKDGSAGFYEFLDTIGDKITLKGWEKYRGGLDTRNDLTGPHAYYSEHNSNEIIFHVSTLLPYANEQPQQPERKRHLGNDVCLIVFVDETANGGESVQAPISPNLVRSHFIHVVIIVSLCARVGGKTLYRVAVAKKESVPEFTPFLPGEIFERGPAMRDFILNKLINGQRAALKSESFQEPFRRYRASVIENICKAAADSRRQAAEQKRTIASRLFNKMTVRKTSSSSALLDGPKAHTMSKANTGLTSAGDTLGAGRDDDLGTLKVPASLREKSHSVEPRMRTATVAVSVPSSPSASHRDAGSPSSKRRPFLFRSSNAGIVGEADVGGTVKDDKRKKEKEQKERDKEKKAEDAKGTQKTKGTLSRLLSSDGGGIGPRTSTM* # ORIGINAL: g4124.t1 original gene structure, not modified by PASA NODE_1048_length_14427_cov_43.3404 AUGUSTUS gene 3448 8402 . + . ID=g4124;Name=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS mRNA 3448 8402 . + . ID=g4124.t1;Parent=g4124;Name=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 3448 3456 . + . ID=g4124.t1.exon1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 3448 3456 . + 0 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 3590 3729 . + . ID=g4124.t1.exon2;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 3590 3729 . + 0 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 3902 4061 . + . ID=g4124.t1.exon3;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 3902 4061 . + 1 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 4205 5779 . + . ID=g4124.t1.exon4;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 4205 5779 . + 0 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 6014 6140 . + . ID=g4124.t1.exon5;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 6014 6140 . + 0 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 6289 6495 . + . ID=g4124.t1.exon6;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 6289 6495 . + 2 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 6692 7233 . + . ID=g4124.t1.exon7;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 6692 7233 . + 2 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 7403 7572 . + . ID=g4124.t1.exon8;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 7403 7572 . + 0 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 7796 7977 . + . ID=g4124.t1.exon9;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 7796 7977 . + 1 ID=cds.g4124.t1;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS exon 8203 8402 . + . ID=g4124.t1.exon10;Parent=g4124.t1 NODE_1048_length_14427_cov_43.3404 AUGUSTUS CDS 8203 8402 . + 2 ID=cds.g4124.t1;Parent=g4124.t1 #PROT g4124.t1 g4124 MAQFPAWAWAVVAASCAFVTIDPWLILYGTLYTLFGTIGFLCAIFVIGSSKRSLKYFGVTGNARLGRTAKGMPQVMCALSSVTNSKGDKRLTGASIIDTLLQQVIDYSFRDFIEFWYYDFSKDPHFIFHTRQTVSTAIIRFAGRAKEMDVVTLFSVNYVDEFINHLRCFRKAQERVAATELKRSTDDLTAKGGEDPYEREIAERFFEMEKQHAAVCMSEEAEKAYLEDLSEVLLFLLLPADDFRNKPLRYMVRELLVSKVFMPVVEMLADPDYINQTIDMWIPQSVLTHETLMKTIKMCVTPDDLIVIYEKINRELAELDVHFQAAYGARRGSEASASGVGVADEVAADAEHLMPTSALGGDDALTPGGAKVGGATGAGAGAGGTMTDQGRKQHRLRCLSARRLCERRLAEFNRTDVICPLPGQSRDPQSLPQRTSSLTLDFVLTNSIAITYFMEYLESTKELLDLHFWLTVEMFRTTSYLRGKRPIDTTASGPGPGAPGQNLPASPSVGGSSITSASFHSVTSMRSSRDSSLMTALGEGDTSAEAVAAAAVSGNVQLSADVPSGNTGLNIEADPEYDDSLRTEALRIYDLYMGESASPRINLGDKVCAHVYQRIMKSPSPNAFDSAVSKVYDRLMKHFRKFRRSQNCTRLINDLDLIDRAIESDEEASDDHLEDGASGDDIVGPLLRGENAETASLLPSKRISLDERASQAPLGRPSIVAAHGEDAESVAWGASMRSMEIRGDVAVYIMEVRREDGTGVLQWTIARRYSDFHDLHMQLQKKFPNIGDFAELPPKRAFKNLSKTFLENRRQALALYLSQLLSPAVISRSRKIEDLIGSFLSYGAYEKEYGGIARKMDSIVNPIVSGVKSVGHKIRDIGEDIESVFKADGVQGGSREHSAGAGGTGRTRSGRTGSVLEDWKTTANFDMEEDENIPFRVLLALLDEILELKSRNKWLRRRVMALIRQVITQTFGDTINRKIVESVDYYTSYEQIAYYITQYRDSMWPGGVLGPPYVPRTPEAKLHTKLDAKAKILGSMPDDLKRVVGGENCRRSGLRIFDMLQQRRLNKRLVYCMLESTLQRLFPAVNFGDIIKRLHAGRKKKAY* # ORIGINAL: g4384.t1 original gene structure, not modified by PASA NODE_3101_length_4316_cov_39.4824 AUGUSTUS gene 678 3827 . + . ID=g4384;Name=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS mRNA 678 3827 . + . ID=g4384.t1;Parent=g4384;Name=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 678 1724 . + . ID=g4384.t1.exon1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 678 1724 . + 0 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 1995 2072 . + . ID=g4384.t1.exon2;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 1995 2072 . + 0 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 2262 2623 . + . ID=g4384.t1.exon3;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 2262 2623 . + 0 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 2724 2784 . + . ID=g4384.t1.exon4;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 2724 2784 . + 1 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 2976 3060 . + . ID=g4384.t1.exon5;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 2976 3060 . + 0 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 3372 3464 . + . ID=g4384.t1.exon6;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 3372 3464 . + 2 ID=cds.g4384.t1;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 3637 3827 . + . ID=g4384.t1.exon7;Parent=g4384.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 3637 3827 . + 2 ID=cds.g4384.t1;Parent=g4384.t1 #PROT g4384.t1 g4384 MDSLHHPAAIRRAKRPRDGDDAHDSSGSVECTGASDDRCAAPCISPDANNENNCNTANASRMRRRKTEHPTPAVSPKRRRLAAAAVESVAVEGLEAGDSSSSDESFECADGDIGDMDVDEDAEGDGSDSSDRGSSQVSSEGETSGSEEDGESVSDGSIMDDDGDGGAGEVSDAKMIRAGDEKRSSWVGRTASERAMSCVASPGNFSTHEMQNNLRWTAHSNMAVAAGDAEEWTDVTGDDDDDDLCDADSDVDGIASRSGDVRASAREGERERGGNRVGSARRATAGGGGVGKPQKERGDGEEDEESGEDAVRDTSVDPATVAGCLNSDALEKSARKFNLSTQNVKSILHHVLTSDAFGKLLKETIAGHSNEPDWQSTIKMTRSRMAAHMQVHRERQASAQGGVASSPAGDVARFADSGAGLQSTPVRSQQPQQQQPHTWGSVLDTMSMQSESDDEDYVPEECTAEGQQGLTAGGRIGVAGDWDNEDADDDDEGIPSEDEEIIALKKLLDFIPDAVPSEPQSGNTIALRTRSKLPADNAPMVDIAQLLQLSPGSSVDHSDSDKDEYKLFLRSLAMGETVHGVAGSANQGGDADEDEDEDDPEYNFLADDLASYVEPEEYRTDRSVRVSREYLDVAATAT* # ORIGINAL: g4383.t1 original gene structure, not modified by PASA NODE_3101_length_4316_cov_39.4824 AUGUSTUS gene 46 142 . - . ID=g4383;Name=g4383.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS mRNA 46 142 . - . ID=g4383.t1;Parent=g4383;Name=g4383.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS exon 46 142 . - . ID=g4383.t1.exon1;Parent=g4383.t1 NODE_3101_length_4316_cov_39.4824 AUGUSTUS CDS 46 142 . - 0 ID=cds.g4383.t1;Parent=g4383.t1 #PROT g4383.t1 g4383 MSLVYDFCRKVALVTGASQGLGRDLAIAFAKA # PASA_UPDATE: g708.t1, single gene model update, valid-1, status:[pasa:asmbl_6503,status:3], valid-1 NODE_375_length_25515_cov_38.3222 . gene 9700 11414 . - . ID=g708;Name=g708.t1 NODE_375_length_25515_cov_38.3222 . mRNA 9700 11414 . - . ID=g708.t1;Parent=g708;Name=g708.t1 NODE_375_length_25515_cov_38.3222 . five_prime_UTR 11378 11414 . - . ID=g708.t1.utr5p1;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . five_prime_UTR 11266 11273 . - . ID=g708.t1.utr5p2;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . exon 11378 11414 . - . ID=g708.t1.exon1;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . exon 11134 11273 . - . ID=g708.t1.exon2;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . CDS 11134 11265 . - 0 ID=cds.g708.t1;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . exon 10521 11006 . - . ID=g708.t1.exon3;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . CDS 10521 11006 . - 0 ID=cds.g708.t1;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . exon 9700 10367 . - . ID=g708.t1.exon4;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . CDS 10041 10367 . - 0 ID=cds.g708.t1;Parent=g708.t1 NODE_375_length_25515_cov_38.3222 . three_prime_UTR 9700 10040 . - . ID=g708.t1.utr3p1;Parent=g708.t1 #PROT g708.t1 g708 MAKLEKKHDFTSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLAEPYKGIGDCFGRVIKEEGFASLWRGNVANVIRYFPTQALNFAFKDQFKRMFGYTKEKDGYWTWFAGNLASGGAAGASSLAFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYRKTLKTDGIAGLYRGFTISCVGIIVYRGLYFGMFDSLKPVLLTGNMKDSFLGAFALGWGITIGAGLASYPIDTIRRRMMMTSGEAVKYKSSLHAFNEIVKKEGTKSLFKGAGANILRAIAGAGVLAGYDQLQLIVFGKTYGSGGGG* # ORIGINAL: g707.t1 original gene structure, not modified by PASA NODE_375_length_25515_cov_38.3222 AUGUSTUS gene 7616 9238 . - . ID=g707;Name=g707.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS mRNA 7616 9238 . - . ID=g707.t1;Parent=g707;Name=g707.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 8326 9238 . - . ID=g707.t1.exon1;Parent=g707.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 8326 9238 . - 0 ID=cds.g707.t1;Parent=g707.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 7616 8205 . - . ID=g707.t1.exon2;Parent=g707.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 7616 8205 . - 2 ID=cds.g707.t1;Parent=g707.t1 #PROT g707.t1 g707 MAPAPTHTSAAHAAAVQGPLPTENRFLSARAAFVACLGVGFFFFQTWVFTLERTQRSLVLRGQTILIIAVVVASLIRYVWVRLIVHTRLPRPLSFLAGAILASFSGLALLSFPLGKIYVGAQSPFPFVIASFVCLGTLFFLVTCLAVLDLLFFVARQVSDASLRSASVDNAAAHRTVKSNPASQRASASFARWKALIACGTALILSAIAISTAAAPPEVVPIRVEMPNLPQRFDGMTIVQISDVHLGPTVGRAMLREIVAMANNLSPDAVVITGDLVDTSFDNAQPMLAEIAQLRAPKGVFYVTGNHEYLHSEVDRVLEALVSHGIRILRNDAVQITPHGSPGDRLYIAGVDDFSSERLYGGDHTHDPARALRFVEAGAATVLLAHQPMGIPEALTLGRLKPVDAGSAQKESQVSGKDADDSKGGGADTIGLVLCGHTHGGQLLPFHFAVYAWNPFFSGLYRASTGASVFVSEGANYWGPPMRLLSRRQLTHVTLRVPRT* # PASA_UPDATE: g706.t1, single gene model update, valid-1, status:[pasa:asmbl_6502,status:12], valid-1 NODE_375_length_25515_cov_38.3222 . gene 5662 7421 . + . ID=g706;Name=g706.t1 NODE_375_length_25515_cov_38.3222 . mRNA 5662 7421 . + . ID=g706.t1;Parent=g706;Name=g706.t1 NODE_375_length_25515_cov_38.3222 . exon 5662 5740 . + . ID=g706.t1.exon1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . CDS 5662 5740 . + 0 ID=cds.g706.t1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . exon 5895 5956 . + . ID=g706.t1.exon2;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . CDS 5895 5956 . + 2 ID=cds.g706.t1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . exon 6128 6257 . + . ID=g706.t1.exon3;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . CDS 6128 6257 . + 0 ID=cds.g706.t1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . exon 6637 6763 . + . ID=g706.t1.exon4;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . CDS 6637 6763 . + 2 ID=cds.g706.t1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . exon 6971 7421 . + . ID=g706.t1.exon5;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . CDS 6971 7202 . + 1 ID=cds.g706.t1;Parent=g706.t1 NODE_375_length_25515_cov_38.3222 . three_prime_UTR 7203 7421 . + . ID=g706.t1.utr3p1;Parent=g706.t1 #PROT g706.t1 g706 MESLRSRPATGVESGPVEPLEYLDETEQEQVISEFEAENERVNKLMRYGVGVLGALGAVAFAYCLYAEMSDHSLASFNDDLRKHFTSLTLGLIAPRPLLAVIVFSIASFGNALAAIFLMGDASRHPITFLPFSRETAIRLSLAMALAPFGTIMYGAFTTGASVHTPILLVLGSANMFVSIVWWNAETTISTTEEGLNDLRGSIYKYKKP* # ORIGINAL: g709.t1 original gene structure, not modified by PASA NODE_375_length_25515_cov_38.3222 AUGUSTUS gene 12205 15705 . + . ID=g709;Name=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS mRNA 12205 15705 . + . ID=g709.t1;Parent=g709;Name=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 12205 12623 . + . ID=g709.t1.exon1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 12205 12623 . + 0 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 12794 12834 . + . ID=g709.t1.exon2;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 12794 12834 . + 1 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 13027 13107 . + . ID=g709.t1.exon3;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 13027 13107 . + 2 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 13389 13488 . + . ID=g709.t1.exon4;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 13389 13488 . + 2 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 13695 13788 . + . ID=g709.t1.exon5;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 13695 13788 . + 1 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 13983 14040 . + . ID=g709.t1.exon6;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 13983 14040 . + 0 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 14261 14443 . + . ID=g709.t1.exon7;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 14261 14443 . + 2 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 14563 14696 . + . ID=g709.t1.exon8;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 14563 14696 . + 2 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 14848 14925 . + . ID=g709.t1.exon9;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 14848 14925 . + 0 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 15137 15314 . + . ID=g709.t1.exon10;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 15137 15314 . + 0 ID=cds.g709.t1;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 15452 15705 . + . ID=g709.t1.exon11;Parent=g709.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 15452 15705 . + 2 ID=cds.g709.t1;Parent=g709.t1 #PROT g709.t1 g709 MKRMSILGLLRPVRRHGATTASFRRIASPVAALQPSTANTMLTRLGGARSLATASDDKQIPLTSERYSHVKRGDYATVGDADIAAFRSVLAPERVLTDKDDLAALNKDWQNKYRGNSQVALRPVSTEEVSKILAYCNKRRLAVVPQGGNTGLVGGSVPVFDEIVLSLSLMNKIIEFDDISGIIKCQAGCVLETLDQYLRERDFIMPLDLGAKGSCQIGGNVSTNAGGIRLIRYGSLHGSVLGIEAVLADGTVVNTLHSPRKDNTGYDIKQLFIGSEGTLGVVTAVSVLAPPRPKAVSVALLGCAKFEDVQQTFVTAKQNLGEILSACEFFDGLSMELVQTHLGLTSPLSTQHKFYVLIETSGSNGTHDQEKLEAVLENLMGSSTVETGVVAQGEAQAKSIWALRERIAEATKKEGVVYKYDLSIPVPRLYSLIEDLREHLGARVRSVVGYGHLGDGNLHVNAMSDEYDPEVTALLEPYVYKWTAGEKGSISAEHGLGFMKPQHMHFSQGPGAIALMQGIKRQMDPNGILNPYKTLPKQE* # ORIGINAL: g705.t1 original gene structure, not modified by PASA NODE_375_length_25515_cov_38.3222 AUGUSTUS gene 144 4997 . - . ID=g705;Name=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS mRNA 144 4997 . - . ID=g705.t1;Parent=g705;Name=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 4866 4997 . - . ID=g705.t1.exon1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 4866 4997 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 4632 4721 . - . ID=g705.t1.exon2;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 4632 4721 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 4177 4338 . - . ID=g705.t1.exon3;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 4177 4338 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 3977 4045 . - . ID=g705.t1.exon4;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 3977 4045 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 3572 3679 . - . ID=g705.t1.exon5;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 3572 3679 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 3122 3264 . - . ID=g705.t1.exon6;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 3122 3264 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 2763 2895 . - . ID=g705.t1.exon7;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 2763 2895 . - 1 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 2335 2501 . - . ID=g705.t1.exon8;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 2335 2501 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 1899 2053 . - . ID=g705.t1.exon9;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 1899 2053 . - 1 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 1528 1675 . - . ID=g705.t1.exon10;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 1528 1675 . - 2 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 1249 1318 . - . ID=g705.t1.exon11;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 1249 1318 . - 1 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 900 1043 . - . ID=g705.t1.exon12;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 900 1043 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 505 626 . - . ID=g705.t1.exon13;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 505 626 . - 0 ID=cds.g705.t1;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 144 297 . - . ID=g705.t1.exon14;Parent=g705.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 144 297 . - 1 ID=cds.g705.t1;Parent=g705.t1 #PROT g705.t1 g705 MLIQKESFRQAYEQMRQNAMGSSCSILILVAPDADALCACKILTTQLKMDMVTYQLMPVTGYGHIRDVLTGEDKFKSVVLLNCGANVDLTAYLSDVPEDTTFYVSDSHRPYDLGNVYGTVVDDELVDKVILFDDGTTEDVPDVEAYRTALEDSEDEFDNYDEEEEEASEGSDDDHGGRPPKRRRLEDRMERRKARKDARKRLRLYKEGSSYGASCACLMYTLVRELSKETNDLLWHAVVGLTDQYIHERIDRQRYGVDVNDMKDEVLRKNVADDEGIESTSDALRIKFDQEFRFMLFRHWSLFDGMMHSSYVANTLGIWNEKGRKKLHSLFAMIGAPLAECHQNYRSMDIRLRRELPEKIATFGPDYGLKDLTFGSFFAQKGLKHKISASDVAYALTALLESSGDLTEEDSGDSDIAVDRRRSRNNFYKAMDALSSLGSPELHEGLQWAMEQHRAIVRQVSSMMAKKNIVMPGPFRYAYITEATDLHHFKHPLTLAKLAYFLNDAIMEASKNKQRPKPLVVAALNEAANCYLVVGIMGNGRHGETRKNKFGEFFRHSADLTNARIKHDGFDSSVLMIRREDVGTFMESLHASLGLDEL* # ORIGINAL: g710.t1 original gene structure, not modified by PASA NODE_375_length_25515_cov_38.3222 AUGUSTUS gene 16248 25224 . - . ID=g710;Name=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS mRNA 16248 25224 . - . ID=g710.t1;Parent=g710;Name=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 25166 25224 . - . ID=g710.t1.exon1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 25166 25224 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 24846 24917 . - . ID=g710.t1.exon2;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 24846 24917 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 24402 24476 . - . ID=g710.t1.exon3;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 24402 24476 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 24085 24186 . - . ID=g710.t1.exon4;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 24085 24186 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 23809 23874 . - . ID=g710.t1.exon5;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 23809 23874 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 23319 23393 . - . ID=g710.t1.exon6;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 23319 23393 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 22861 22932 . - . ID=g710.t1.exon7;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 22861 22932 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 22564 22635 . - . ID=g710.t1.exon8;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 22564 22635 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 21928 22324 . - . ID=g710.t1.exon9;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 21928 22324 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 21501 21537 . - . ID=g710.t1.exon10;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 21501 21537 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 21256 21310 . - . ID=g710.t1.exon11;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 21256 21310 . - 2 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 20170 21035 . - . ID=g710.t1.exon12;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 20170 21035 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 19713 19795 . - . ID=g710.t1.exon13;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 19713 19795 . - 2 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 19488 19549 . - . ID=g710.t1.exon14;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 19488 19549 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 19234 19282 . - . ID=g710.t1.exon15;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 19234 19282 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 18833 18952 . - . ID=g710.t1.exon16;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 18833 18952 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 18576 18622 . - . ID=g710.t1.exon17;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 18576 18622 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 18347 18402 . - . ID=g710.t1.exon18;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 18347 18402 . - 1 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 17730 17815 . - . ID=g710.t1.exon19;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 17730 17815 . - 2 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 17204 17233 . - . ID=g710.t1.exon20;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 17204 17233 . - 0 ID=cds.g710.t1;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS exon 16248 17030 . - . ID=g710.t1.exon21;Parent=g710.t1 NODE_375_length_25515_cov_38.3222 AUGUSTUS CDS 16248 17030 . - 0 ID=cds.g710.t1;Parent=g710.t1 #PROT g710.t1 g710 MRGFLTDINFVKVIPTLTTLDVTGNLLASLPADVFSNSPNLVKLRVDSNQLTAFDRATFGSRVVSIRVLDMAFNRLGGRLNASDPFWEDLAPYTFSAMSIDTLYLHNNGIARIRKAFWGARIGRLGLALNKISYIHERAFKDVKTSLKFLILESNQLRTLPRNVFKGLDVLETLNINNNKITTLPLGLFDGLIRLTNMQCRNNFIESIDDDLFRSATLAGLRGEAIFIDFSGNPGGNFSLCPVDKVVDTPLCVFPTCYSCMCRAGLTGPRCSVSCGTNGTSPVDARSITALDTYGAHCVGNCTNCLNIAACSPRTGCICLPGWEGEFCDKKIRAEIAPVIKEVTTTTVTLEWDNSNCNDCGYRLQRTRVEIVQLCVDTLLPDDDACYEAIETGEVFIRPFFQKTTRLVDSDLYPDTEYRYRLQVRTPDSVVSSSDRFVVIRSAVPGQPPAVKISGVYEVTPGVLRLSWGTVADSNGYILRYDVYRGEGTRYESDHVMFVASLNREDRFYDDRNVSMGITYHYAVVAALDDGTTHGRAGTLPASYRSALADGLYENATLSIPLNTTRDSIGQALTSGRTVQTATISAAVVVSVTVLVIFAALMRWSYVRARANKHKEMHEGFLKNLLESKDFDALEIEREAVNMLEEVGSGEFGVVYRARVATKDGRIRICAVKTLKEGSRVEDRQEFVDEAKIMRGLSNPYLMSLVGICIRDEPMLIVLEYVPHGSLKRFTQLIPESQQQSTVTISLLVLLSHQIARGMEYLHSVGVVHRDLAARNVMIGQNAFGEYQAKVADFGLSRNTENSYYRKAKKGGKIAVKVWSYGVTVWEAFSFGEIPYAGISNADIVDHIDRGNRLPAPAACPLEMYTLMRRCWQQAPASRPTFEEIVQRTMMKEDQASGASPAVMTMAIGALGPAPPDEENGAFPRMRSLSGSALLNNLRNTLTSSLWSAWRKESAIPVAVEEEEDSAHANVLHGSRWGASARGGTTDHSNDADADEYDCVELAENPYANGPTLMSPTLKSKSTRKGKPYGFASNGVVGKRSASTDSLSMNAPPSPMIASVGDGLYDRLVERRDGRGAGDADAYDNFT* # ORIGINAL: g4975.t1 original gene structure, not modified by PASA NODE_3745_length_2847_cov_31.2738 AUGUSTUS gene 133 2738 . + . ID=g4975;Name=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS mRNA 133 2738 . + . ID=g4975.t1;Parent=g4975;Name=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 133 237 . + . ID=g4975.t1.exon1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 133 237 . + 2 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 382 449 . + . ID=g4975.t1.exon2;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 382 449 . + 2 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 646 804 . + . ID=g4975.t1.exon3;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 646 804 . + 0 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 1073 1211 . + . ID=g4975.t1.exon4;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 1073 1211 . + 0 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 1543 1640 . + . ID=g4975.t1.exon5;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 1543 1640 . + 2 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 1791 1898 . + . ID=g4975.t1.exon6;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 1791 1898 . + 0 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 2193 2321 . + . ID=g4975.t1.exon7;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 2193 2321 . + 0 ID=cds.g4975.t1;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS exon 2655 2738 . + . ID=g4975.t1.exon8;Parent=g4975.t1 NODE_3745_length_2847_cov_31.2738 AUGUSTUS CDS 2655 2738 . + 0 ID=cds.g4975.t1;Parent=g4975.t1 #PROT g4975.t1 g4975 DPTIFGNLNTHSEVVDAVVSAVQSHKANGYPASTGYEASRKAIADLYTYENGVLRPEDVIIASGCSGAIELAINVLANPGQNILVPRPGFPLYEVLATSLGINVKFYDLLPDRNWETDLASLESLIDENTATIVVNNPSNPCGSVLSKEHLLAILDVAERHFIPIISDEIYADMVFAGEHYHPLAPLSKNVPILTCGGIAKRWLVPGWRVGWILIYDRNNVFESEIRSGLVSLSQRILGANTLVQTALPAIFERTPKEFYSSVLAQIKENADVCFTALSASTVLKPVMPQGAMYMM # PASA_UPDATE: g4342.t1, single gene model update, valid-1, status:[pasa:asmbl_5062,status:12], valid-1 NODE_280_length_28338_cov_40.5508 . gene 26971 28257 . + . ID=g4342;Name=g4342.t1 NODE_280_length_28338_cov_40.5508 . mRNA 26971 28257 . + . ID=g4342.t1;Parent=g4342;Name=g4342.t1 NODE_280_length_28338_cov_40.5508 . five_prime_UTR 26971 27068 . + . ID=g4342.t1.utr5p1;Parent=g4342.t1 NODE_280_length_28338_cov_40.5508 . exon 26971 27929 . + . ID=g4342.t1.exon1;Parent=g4342.t1 NODE_280_length_28338_cov_40.5508 . CDS 27069 27929 . + 0 ID=cds.g4342.t1;Parent=g4342.t1 NODE_280_length_28338_cov_40.5508 . exon 28105 28257 . + . ID=g4342.t1.exon2;Parent=g4342.t1 NODE_280_length_28338_cov_40.5508 . CDS 28105 28257 . + 0 ID=cds.g4342.t1;Parent=g4342.t1 #PROT g4342.t1 g4342 MASPVATYTTTAASSDYDALVVVTDSIDRIRANATSNPSLGIDAVAPALTAARALDAAVGSLVCLIPVNGVCGNRVILSPTGPLSRDYDDVRRFADASAAGVRRAIKAGSRQPLVAVFPFSTHATDPQHQMRLQTLYSRAVEVALLAAQAALHTPLEVVEFDRESIKVRSVGILVGSQSVGERICRCVNAIESGRVVARDIAGSDPERMAPPRVAEYVQKTFEGSCISVGVTTDPEVLRREFPLLAAVARATRGIPRHAACVVDLEYNPPASVASAQPMTTLLLVGKGITYDTGGADVKTGGAMSGMHRDKSGAGAVAGLFKVCDYVCVCVCPIWTC* # PASA_UPDATE: g4334.t1, single gene model update, valid-1, status:[pasa:asmbl_5063,status:12], valid-1 NODE_280_length_28338_cov_40.5508 . gene 138 1283 . - . ID=g4334;Name=g4334.t1 NODE_280_length_28338_cov_40.5508 . mRNA 138 1283 . - . ID=g4334.t1;Parent=g4334;Name=g4334.t1 NODE_280_length_28338_cov_40.5508 . five_prime_UTR 1220 1283 . - . ID=g4334.t1.utr5p1;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . exon 1110 1283 . - . ID=g4334.t1.exon1;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . CDS 1110 1219 . - 0 ID=cds.g4334.t1;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . exon 711 907 . - . ID=g4334.t1.exon2;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . CDS 711 907 . - 1 ID=cds.g4334.t1;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . exon 468 552 . - . ID=g4334.t1.exon3;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . CDS 468 552 . - 2 ID=cds.g4334.t1;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . exon 138 291 . - . ID=g4334.t1.exon4;Parent=g4334.t1 NODE_280_length_28338_cov_40.5508 . CDS 138 291 . - 1 ID=cds.g4334.t1;Parent=g4334.t1;3_prime_partial=true #PROT g4334.t1 g4334 MGDLDDLPPTLQNILDQQSLHWIFVGGKGGVGKTTCSCSLAVQLSKVRRNVLIISTDPAHNLSDAFGQKFTKEPSLVNGFPNLFAMEIDPTLDMGDTAFVGEGSETQSMMQELMSAIPGIDEAMSFSEVMNLVDRMDYSVVVFDTAPTGHTLRLLSFPTLLEKGLSKLSELKSRFGPLLSQV # PASA_UPDATE: g4341.t1, single gene model update, valid-1, status:[pasa:asmbl_5064,status:12], valid-1 NODE_280_length_28338_cov_40.5508 . gene 22698 26578 . - . ID=g4341;Name=g4341.t1 NODE_280_length_28338_cov_40.5508 . mRNA 22698 26578 . - . ID=g4341.t1;Parent=g4341;Name=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 26453 26578 . - . ID=g4341.t1.exon1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 26453 26578 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 26029 26115 . - . ID=g4341.t1.exon2;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 26029 26115 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 25428 25587 . - . ID=g4341.t1.exon3;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 25428 25587 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 25215 25268 . - . ID=g4341.t1.exon4;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 25215 25268 . - 2 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 24680 24978 . - . ID=g4341.t1.exon5;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 24680 24978 . - 2 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 24282 24377 . - . ID=g4341.t1.exon6;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 24282 24377 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 23900 24049 . - . ID=g4341.t1.exon7;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 23900 24049 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 23464 23658 . - . ID=g4341.t1.exon8;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 23464 23658 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . exon 22698 23121 . - . ID=g4341.t1.exon9;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . CDS 22960 23121 . - 0 ID=cds.g4341.t1;Parent=g4341.t1 NODE_280_length_28338_cov_40.5508 . three_prime_UTR 22698 22959 . - . ID=g4341.t1.utr3p1;Parent=g4341.t1 #PROT g4341.t1 g4341 MSVIPKEAIRLAAESVGISQLDDKVMTVLIPDVEYRLREIVQDALKFMKHSKRTRLSTEDINSALRVKNIDPVYGNVAPEPVVFKGVTGPSGRAETYFAEDEEIDLASIINAPLPKVPVDVSFTAHWLAIEGVQPAIAENPPVCMEPKPAAVGGRPQPADKAVAAALAVATGLAEAGKTADVRPLVRHVLSRELQVYYERITQALLDTAGPDEPRQAALECLKTDPGLHQLLPYFCQFVLEKVTERLRDLPVLILLMRAVQALFANQSLFLEPYLHQIMPAILTCLVGKLGLRQMEDHWSLRDLAANTVETICRKYGDKYDTLQRRIAKTLSGAMKDDKPLGVRYGAIVGLSALGPEAVRELVLPHVQSIAESLDDRNPDAYHVRKALLDAVAKMIRHDERNGSTNTRPDYRAMYGVFGEWLQSHLAPVGGNTIVLHVPPSL* # ORIGINAL: g4336.t1 original gene structure, not modified by PASA NODE_280_length_28338_cov_40.5508 AUGUSTUS gene 4080 4370 . - . ID=g4336;Name=g4336.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS mRNA 4080 4370 . - . ID=g4336.t1;Parent=g4336;Name=g4336.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 4080 4370 . - . ID=g4336.t1.exon1;Parent=g4336.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 4080 4370 . - 0 ID=cds.g4336.t1;Parent=g4336.t1 #PROT g4336.t1 g4336 MASQHDPKGHNIPPEATQGHRPELKETFYEDLEGRQQKSATTQGRSKQTKHTEPSSDWSDDQRGEPPGVPPTPQSMNHGAGLDLLEKKTDEAPLAL* # PASA_UPDATE: g4340.t1, single gene model update, valid-1, status:[pasa:asmbl_5061,status:3], valid-1 NODE_280_length_28338_cov_40.5508 . gene 17928 22158 . + . ID=g4340;Name=g4340.t1 NODE_280_length_28338_cov_40.5508 . mRNA 17928 22158 . + . ID=g4340.t1;Parent=g4340;Name=g4340.t1 NODE_280_length_28338_cov_40.5508 . five_prime_UTR 17928 18069 . + . ID=g4340.t1.utr5p1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 17928 18223 . + . ID=g4340.t1.exon1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 18070 18223 . + 0 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 18440 18552 . + . ID=g4340.t1.exon2;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 18440 18552 . + 2 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 18863 19096 . + . ID=g4340.t1.exon3;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 18863 19096 . + 0 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 19288 19357 . + . ID=g4340.t1.exon4;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 19288 19357 . + 0 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 19535 19691 . + . ID=g4340.t1.exon5;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 19535 19691 . + 2 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 19927 20054 . + . ID=g4340.t1.exon6;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 19927 20054 . + 1 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 20226 20601 . + . ID=g4340.t1.exon7;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 20226 20601 . + 2 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 20719 20874 . + . ID=g4340.t1.exon8;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 20719 20874 . + 1 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . exon 21260 22158 . + . ID=g4340.t1.exon9;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . CDS 21260 21347 . + 1 ID=cds.g4340.t1;Parent=g4340.t1 NODE_280_length_28338_cov_40.5508 . three_prime_UTR 21348 22158 . + . ID=g4340.t1.utr3p1;Parent=g4340.t1 #PROT g4340.t1 g4340 MPVAPGVQQPLPPGHRHYSTPREIEEFVVSFATIKAKLPWHKVMVNGILAGAFVGLSGMLSATAAGGFTAEFRALYPAVPKLLGGAVFPLGLVLILLYGGELFTGNTMYFLVGLMHRKVSFRDIARNWFIVYFANLAGCLTVAYFFSYLTGYFEAEPYLSYVVKLSESKCSHDFGNTLLRAIPANWLVCLAITTSLAAQDVGGKAVAMWYPIFGFATIGFEHCVASMFVIPNGMLYGANVTAGEFIVKNLIPATIGNLIGGGFLCGVTLVYLYHWFLSAPAPTADGKKEPPLKPSTPANAPNGGLHRNSSSTKIEMTDLHMTPSSPRTLMAAQKGTPAANYVKRYRTKEGASLPVSISVYLTSSDAAKGGASVGRQVVAYVERLMSQQEASVSSGDANHFGFLIVDHDGSRPLEEGRIVFADDAVCAMLGYSRDELCHMTIDSITHPGDSDVSGKYLREMFQANQSDGKTPAAWEIRGRRESTMPILHAEV* # PASA_UPDATE: g4337.t1, single gene model update, valid-1, status:[pasa:asmbl_5059,status:3], valid-1 NODE_280_length_28338_cov_40.5508 . gene 4869 6473 . + . ID=g4337;Name=g4337.t1 NODE_280_length_28338_cov_40.5508 . mRNA 4869 6473 . + . ID=g4337.t1;Parent=g4337;Name=g4337.t1 NODE_280_length_28338_cov_40.5508 . five_prime_UTR 4869 4928 . + . ID=g4337.t1.utr5p1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . exon 4869 4988 . + . ID=g4337.t1.exon1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . CDS 4929 4988 . + 0 ID=cds.g4337.t1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . exon 5096 5230 . + . ID=g4337.t1.exon2;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . CDS 5096 5230 . + 0 ID=cds.g4337.t1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . exon 5381 5521 . + . ID=g4337.t1.exon3;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . CDS 5381 5521 . + 0 ID=cds.g4337.t1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . exon 5648 5809 . + . ID=g4337.t1.exon4;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . CDS 5648 5809 . + 0 ID=cds.g4337.t1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . exon 6103 6473 . + . ID=g4337.t1.exon5;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . CDS 6103 6294 . + 0 ID=cds.g4337.t1;Parent=g4337.t1 NODE_280_length_28338_cov_40.5508 . three_prime_UTR 6295 6473 . + . ID=g4337.t1.utr3p1;Parent=g4337.t1 #PROT g4337.t1 g4337 MSSLTFVTNPICPFAHRVWLTLEEIGLKYETKETPLTDKPAWFTEIYGKALGSDPTSDGKVPVLQDDDFILTESAVVAEYLAEKYGHSTGLLGKSAEDRARIRIFTEQFTGKFIPLWYGVIRAQDDESKAKATKDFLALTARISKEYERTTGPFFLGSEASLADVLLFPWIFRLPVLTHYRGYEVPNTPEYAAFHKFVAAFTERKSAKAAAPPQQLFIDGYYKYANPSK* # ORIGINAL: g4338.t1 original gene structure, not modified by PASA NODE_280_length_28338_cov_40.5508 AUGUSTUS gene 6984 12298 . - . ID=g4338;Name=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS mRNA 6984 12298 . - . ID=g4338.t1;Parent=g4338;Name=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 12207 12298 . - . ID=g4338.t1.exon1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 12207 12298 . - 0 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 11447 12047 . - . ID=g4338.t1.exon2;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 11447 12047 . - 1 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 10888 11030 . - . ID=g4338.t1.exon3;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 10888 11030 . - 0 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 10511 10613 . - . ID=g4338.t1.exon4;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 10511 10613 . - 1 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 9570 10254 . - . ID=g4338.t1.exon5;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 9570 10254 . - 0 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 7494 9252 . - . ID=g4338.t1.exon6;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 7494 9252 . - 2 ID=cds.g4338.t1;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 6984 7254 . - . ID=g4338.t1.exon7;Parent=g4338.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 6984 7254 . - 1 ID=cds.g4338.t1;Parent=g4338.t1 #PROT g4338.t1 g4338 MVGTGGVGGCVDQVDGRSRLLVPETDKRDYRIIRLDNGLVAMLISDPNASDGDSDEDEDDNETSLNAGDSTRLSSDAAGTSGSASARKRKRLDEANDECAVEAAEKASEEESEEDDSDQYEDVNEEDDVDATLTDSSCSEMEESGPLSESEGDGIVTADTEMADVSDSARRKSRVPRRAHVGGDSGEEDDESGDDDDGDVDGDGNGGGDGEEEADGTPGRKGEPAAKGTKKAAAGLSVGVGSFADPPDVPGLAHFLEHMLFMGSAKYPEENGFDAFIRRHAGSNNASTDGENTVFQFDIRRRRFKEGLDRFAQFFVAPLMDPSSTEREMKAVDSEFRMCLQRDDCRKQQLLCSMANPNHPMSKFTWGNLQTLGTQPAAAGIDVRAQLVAFYQQHYHAANMRLVVECNEPLDVIESWVRECFGPVRGPPTPSPLPLARDRIAPCCIPGDCLHNASANSVPSDAAAVCGSVYLPLHPLCAKVAPNFGHYGHPFAHENSTFNSTLLVQSVKDTHELEMVFVLPCMTSRYRGKPSQYVAELLGHEGPGSVFSLLKSRGWATSLCAGNFGSGHERNASSTLFQVSVTLSDAGLDNVAEVSSLIFQYLSLLRSVGPQRRLFDEFAAIARTSFAFRERDDPIDYVDEVATAMLYYPEEHILAGDYLYLDYDPDAITFVLDILRPQNASLMVVSSKFEPNKSPAPGVPPLTLTEPYFGTAYVRVQTQPSFLSECGSDGQINAALSLPAPNEFVATDFSIRELDLASANDFPSLVLSTPLGNVWYKKDSKFLMPRASIFVHLVTPLVYASATGAALADAYALALDHSMRDFSYAAELADVSYSLNAGSTGLILKVGGFSHKLSVLFERIVQRMASFHCDAGAFEMVRAQLVRRYRNADLRPGKLASSGRLGVLVDVRWSNADKLKAMGDVTAGDLGSFAVGLGSRLFVDALFHGNLTSAESVAMFNVLHAHLKYGVLPIDAQPFERCISLPQGELVLALPNANAEDENNVVEDYFQADASSIEACALAELTEYLMEEPCFDHLRTRLQLGYDVGCGYRNTCGRLGFVVRVSSQSNKFTTADVDARIEEFVEMMVGKLETMTDADYKQGVDALVSNKLRPDHSQTEEADRFWAEIADRYYLFDRNRAEAAVIADMPRSKVIGFVRSHLFERSSRRKLSVRVLGRGETSPVGDADRHLLSDDAAVVALKASCEFYPNLSNAQMYVVSG* # ORIGINAL: g4335.t1 original gene structure, not modified by PASA NODE_280_length_28338_cov_40.5508 AUGUSTUS gene 1859 3373 . + . ID=g4335;Name=g4335.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS mRNA 1859 3373 . + . ID=g4335.t1;Parent=g4335;Name=g4335.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS exon 1859 3373 . + . ID=g4335.t1.exon1;Parent=g4335.t1 NODE_280_length_28338_cov_40.5508 AUGUSTUS CDS 1859 3373 . + 0 ID=cds.g4335.t1;Parent=g4335.t1 #PROT g4335.t1 g4335 MDARFSAHRPALSSGWLTARESSAPASPVANNNCRPDGHLRQAVLRRSPLARINPNIVPDAVLHKDTYSKSSTRQATLLNYFACDSPVSSRDAYGGEGTEMLCNDSPSSPRNAGGATFGSKPKRKRADDSGTPVRQHRRPHVEREEDTNDDVVVSGLDTRHNLLANGLGFGLAISHNASDGHPPHSTTATAVNENATPTRRSWHHNGHYETPTHNFASMPHSHGLDSAGIHQHGTAHATYSPAKRIIDSISAPTPSPMKPHDCPDSHSQRSCPLARPYRHSMCSAIDSDSEYVTVDSDGRARAFSAGADLTELATRIERLHRQVGSEDVRVASSLRAHADVHAIDGMDPDHNNALDTALDMDSMSPLPSPPDVSNLSSSQLYALCSLGSFSEASQEYHASSLGHQQSAYIADVHAEEHYPSSQSQDHYQQTTHYNLQHQHMQQQQQQHQQHPHQQHQQLHMQAGWTSFGGESIASPPDCGAETGRLFAEQFGSSWDEDASQMEY* # PASA_UPDATE: g4339.t1, single gene model update, valid-1, status:[pasa:asmbl_5060,status:12], valid-1 NODE_280_length_28338_cov_40.5508 . gene 12796 16985 . + . ID=g4339;Name=g4339.t1 NODE_280_length_28338_cov_40.5508 . mRNA 12796 16985 . + . ID=g4339.t1;Parent=g4339;Name=g4339.t1 NODE_280_length_28338_cov_40.5508 . five_prime_UTR 12796 13000 . + . ID=g4339.t1.utr5p1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 12796 13073 . + . ID=g4339.t1.exon1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 13001 13073 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 13246 13314 . + . ID=g4339.t1.exon2;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 13246 13314 . + 2 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 13480 13579 . + . ID=g4339.t1.exon3;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 13480 13579 . + 2 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 13834 13918 . + . ID=g4339.t1.exon4;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 13834 13918 . + 1 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 14133 14263 . + . ID=g4339.t1.exon5;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 14133 14263 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 14483 14600 . + . ID=g4339.t1.exon6;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 14483 14600 . + 1 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 14738 14916 . + . ID=g4339.t1.exon7;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 14738 14916 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 15130 15250 . + . ID=g4339.t1.exon8;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 15130 15250 . + 1 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 15573 15662 . + . ID=g4339.t1.exon9;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 15573 15662 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 15953 16053 . + . ID=g4339.t1.exon10;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 15953 16053 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 16368 16446 . + . ID=g4339.t1.exon11;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 16368 16446 . + 1 ID=cds.g4339.t1;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . exon 16809 16985 . + . ID=g4339.t1.exon12;Parent=g4339.t1 NODE_280_length_28338_cov_40.5508 . CDS 16809 16985 . + 0 ID=cds.g4339.t1;Parent=g4339.t1 #PROT g4339.t1 g4339 MATAAKPGGDAATPQKENHLLVLKVMRLSRPNLVSNQPVTCETIDFPGTTLHEYTAGDPKTPKDLEAFGLGEFLALPQNFGNIYLGETFSSYISVHNDSTQNARDVSIKAELQTSSQRINLSDTSSKPASTLSPNGSIDMVVHHEVKELNIHILVCSVNYTTVDGERMFFRKFFKFQVMHPLAVKTKIYNLEDDVFLEAQVQNITATPMFIDVVKFEPGAPFTHVDLNVIADASVAEAVGYAGLGPDSSALPIGAADTPKLTFGLMSQLNPQDIRQYLYRLSPKVKGDKGARTSATIGKMDIVWKTNLGETGRLQTSQLPRKPPVLPEIHVSVVEVPSRIVLEKPFTVKCKIMNQSDRKLSLRLYAVKSRMTGVLVNGVSGEYIGEFAADSNKTIPLTLFPVAPGLQPIHGLRVIDLISGKGYDLDNIAEVFVYTSEQDQ* # ORIGINAL: g4448.t1 original gene structure, not modified by PASA NODE_2217_length_7205_cov_40.2146 AUGUSTUS gene 2 2313 . + . ID=g4448;Name=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS mRNA 2 2313 . + . ID=g4448.t1;Parent=g4448;Name=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 2 117 . + . ID=g4448.t1.exon1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 2 117 . + 0 ID=cds.g4448.t1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 429 485 . + . ID=g4448.t1.exon2;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 429 485 . + 1 ID=cds.g4448.t1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 801 914 . + . ID=g4448.t1.exon3;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 801 914 . + 1 ID=cds.g4448.t1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 1232 1294 . + . ID=g4448.t1.exon4;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 1232 1294 . + 1 ID=cds.g4448.t1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 1599 1714 . + . ID=g4448.t1.exon5;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 1599 1714 . + 1 ID=cds.g4448.t1;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS exon 1958 2313 . + . ID=g4448.t1.exon6;Parent=g4448.t1 NODE_2217_length_7205_cov_40.2146 AUGUSTUS CDS 1958 2313 . + 2 ID=cds.g4448.t1;Parent=g4448.t1 #PROT g4448.t1 g4448 PSPSLSPRQYMDLGSLFDLLGKRDRPVDLSMERKMLLARDAINGIRYLHLNTPQILHRDLKSANLLINSNLTLKVADFGLATFRAHMNEKIGTLLWAAPEVLDGSQSYTAACDIYSFGIIMWELLTERVPYVTDLSATESENHFDLGMLLVGIVEHDLRPEIPLTCPRQLARLIRSCWSFDPNHRPTVGMVANSLSDLDSLLRSGSIDSGDIMGAKSPMPARASVSDIVRKMSIARQQQQSHAGTHQQHAPTAPPIAPIESDTSDLSQALRNV* # PASA_UPDATE: g4449.t1, single gene model update, valid-1, status:[pasa:asmbl_3793,status:12], valid-1 NODE_2217_length_7205_cov_40.2146 . gene 3215 7204 . - . ID=g4449;Name=g4449.t1 NODE_2217_length_7205_cov_40.2146 . mRNA 3215 7204 . - . ID=g4449.t1;Parent=g4449;Name=g4449.t1 NODE_2217_length_7205_cov_40.2146 . five_prime_UTR 7203 7204 . - . ID=g4449.t1.utr5p1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 7129 7204 . - . ID=g4449.t1.exon1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 7129 7202 . - 0 ID=cds.g4449.t1;Parent=g4449.t1;5_prime_partial=true NODE_2217_length_7205_cov_40.2146 . exon 6639 6733 . - . ID=g4449.t1.exon2;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 6639 6733 . - 1 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 6264 6377 . - . ID=g4449.t1.exon3;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 6264 6377 . - 2 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 5844 6010 . - . ID=g4449.t1.exon4;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 5844 6010 . - 2 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 5584 5660 . - . ID=g4449.t1.exon5;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 5584 5660 . - 0 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 5161 5312 . - . ID=g4449.t1.exon6;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 5161 5312 . - 1 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 4768 5015 . - . ID=g4449.t1.exon7;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 4768 5015 . - 2 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 4344 4502 . - . ID=g4449.t1.exon8;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 4344 4502 . - 0 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 4083 4146 . - . ID=g4449.t1.exon9;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 4083 4146 . - 0 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 3661 3797 . - . ID=g4449.t1.exon10;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 3661 3797 . - 2 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . exon 3215 3488 . - . ID=g4449.t1.exon11;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . CDS 3387 3488 . - 0 ID=cds.g4449.t1;Parent=g4449.t1 NODE_2217_length_7205_cov_40.2146 . three_prime_UTR 3215 3386 . - . ID=g4449.t1.utr3p1;Parent=g4449.t1 #PROT g4449.t1 g4449 SAIGTYTLTYSVVDRAGNRASVNRTVTVVDIDECATTLGGSGRAKCPPNARCINRQGTFDCLCDDGFVKVGSLCSDVTPPIITASTADDTVAQYTPYRARVATAIDNEDGDVSARILTTSTVDSSVPGAYGVTYTVKDAAGNAAMPVFYKVVVADIDECSSSAPLGRRNDCSVNARCENTIGSFVCICIQGFSGNGRTCVDIVPPSIELAGGNEVTLTQGQRYVEPGFTATDNADGIITSRVTIGGTVNGNVPGSYRVTYSVKDAAGNAASVARTVTVDDVNECLVDSKSPDGSLTPGGCDRRTSCINTVGSFYCTACPMGFTGSGTAGCKATVCDYEEYWSDSCGLLGSTSARTCSRGGELVNPSACLISTTGSRICPGTWIQCQPLCRRVTNAPCNCGMEEYWSESCGLILSTTSQTCSAGGELISKYSCYTHLNAWSHGCGFLNLGCSSKCRKLQCKWQ* # PASA_UPDATE: g3812.t1, single gene model update, valid-1, status:[pasa:asmbl_1856,status:12],[pasa:asmbl_1857,status:12], valid-1 NODE_1521_length_10760_cov_40.529 . gene 173 4134 . - . ID=g3812;Name=g3812.t1 NODE_1521_length_10760_cov_40.529 . mRNA 173 4134 . - . ID=g3812.t1;Parent=g3812;Name=g3812.t1 NODE_1521_length_10760_cov_40.529 . five_prime_UTR 3921 4134 . - . ID=g3812.t1.utr5p1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 3894 4134 . - . ID=g3812.t1.exon1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 3894 3920 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 3601 3741 . - . ID=g3812.t1.exon2;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 3601 3741 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 3146 3228 . - . ID=g3812.t1.exon3;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 3146 3228 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 2708 2840 . - . ID=g3812.t1.exon4;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 2708 2840 . - 1 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 2286 2359 . - . ID=g3812.t1.exon5;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 2286 2359 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 1547 1955 . - . ID=g3812.t1.exon6;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 1547 1955 . - 1 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 1275 1343 . - . ID=g3812.t1.exon7;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 1275 1343 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 435 1099 . - . ID=g3812.t1.exon8;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 435 1099 . - 0 ID=cds.g3812.t1;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . exon 173 260 . - . ID=g3812.t1.exon9;Parent=g3812.t1 NODE_1521_length_10760_cov_40.529 . CDS 173 260 . - 1 ID=cds.g3812.t1;Parent=g3812.t1;3_prime_partial=true #PROT g3812.t1 g3812 MAEKWSSDKGPAADSFTNPQKTGWLTKLGGKGMTSNWRRRWFVLEDNYLFYYKTKADKEPMGIVCLDNYDTCERASPNECKKSRSTLVISNSLVPESERNRKYVAFADNEEEFEEWVAALSTSFQNAQNGQFHGSGSHDSLDKLDSPEVERKKDAKDSKEHKDDSRHAAAAAGIAASLGGGKPPLTKRASADALKDKEDATSAAKEGQSHKDKEVPSKESKPLPATPATAPVQLPALTPKPAPASSAESAEKLEKAPLKGDRDSSSSALGMAKSGSTDSLGHVTLTRPTVKGRRLPSRKAFRTFDEDDDDDEKPDTHSIAKEHATPAKAPDAVKEKLVKESKESTEAKEGKETPPKPARSSTPPTPQRGDSLDKSKPPTPRPYSVSKPKAKDPEPPKEVKDTSVEPEKETPKLKEPEKEKEKEKEKEKEKEKEKEKEKEKEGTTASRPTSTSVEAPTKSVSDIPASSSRPASAASSASVAPPSSGAPAASGAGEDLEKIKAETIEAREKAKAILKQAQESKKEVEASRAKVEEGLAALEKGRKELSERQKDMEKREAELEKEK # PASA_UPDATE: g3813.t1, single gene model update, valid-1, status:[pasa:asmbl_1855,status:3], valid-1 NODE_1521_length_10760_cov_40.529 . gene 4550 10152 . + . ID=g3813;Name=g3813.t1 NODE_1521_length_10760_cov_40.529 . mRNA 4550 10152 . + . ID=g3813.t1;Parent=g3813;Name=g3813.t1 NODE_1521_length_10760_cov_40.529 . five_prime_UTR 4550 4608 . + . ID=g3813.t1.utr5p1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . five_prime_UTR 4717 4747 . + . ID=g3813.t1.utr5p2;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . five_prime_UTR 4874 4957 . + . ID=g3813.t1.utr5p3;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 4550 4608 . + . ID=g3813.t1.exon1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 4717 4747 . + . ID=g3813.t1.exon2;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 4874 5048 . + . ID=g3813.t1.exon3;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 4958 5048 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 5191 5270 . + . ID=g3813.t1.exon4;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 5191 5270 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 5462 5602 . + . ID=g3813.t1.exon5;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 5462 5602 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 5856 5933 . + . ID=g3813.t1.exon6;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 5856 5933 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 6080 6248 . + . ID=g3813.t1.exon7;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 6080 6248 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 6591 6808 . + . ID=g3813.t1.exon8;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 6591 6808 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 7092 7268 . + . ID=g3813.t1.exon9;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 7092 7268 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 7501 7585 . + . ID=g3813.t1.exon10;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 7501 7585 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 7772 7950 . + . ID=g3813.t1.exon11;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 7772 7950 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 8193 8268 . + . ID=g3813.t1.exon12;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 8193 8268 . + 0 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 8553 8810 . + . ID=g3813.t1.exon13;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 8553 8810 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 9108 9197 . + . ID=g3813.t1.exon14;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 9108 9197 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . exon 9644 10152 . + . ID=g3813.t1.exon15;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . CDS 9644 9768 . + 2 ID=cds.g3813.t1;Parent=g3813.t1 NODE_1521_length_10760_cov_40.529 . three_prime_UTR 9769 10152 . + . ID=g3813.t1.utr3p1;Parent=g3813.t1 #PROT g3813.t1 g3813 MGFLRWLFGITLNMFFRDIEIVGADNIPASGPVIFVGNHNNQFVDALLLDQCVGSRKVRFLIAEKSFKRKLVGRFARWMESIPVSRAIDNASKGIGCISSQGGKIVGTGTSFVKQAALGDQIQIENINYKIKEIVSDTELHIDGEINPAFTDFSEWKVMKKIDQSAVYKNVHDTLAAGECIGIFPEGGSHDRTSLLPLKAGVALMALGAMEKHTGLPVQIVACGLNYFRGHRFRSRVLVEFTPAITIEDALVQQYKTDKRKATGELLARVEESLKSAVFNAPDYETMVMLHAARRMYTPADAQLSVDQYLKLTRRFAAAHSQLMENPEYQKLFEDLRVYYKDVRKQGLRDRDVAKMQKISRCNAFVGLCWRSVKIFFLTLLALPGFLLVLPIGLMANSVAAKKAVEAKAASDVKLKGLDVIATWKLMTALILCPLAYLFYVGTFAGVFGALSPLVDWLTAVIVIAVSLILPFWAYYSAVAMGEVSRVVIASKPLAFYAFHGDAGKSLQDRRKELAGRVRELVEVLGPQVVPNFDMDRIIKPGELMPMVHGRRSFLGDPSRKNGTEGGESSRDAHIDVELADAKRPILQ* # PASA_UPDATE: g3004.t1, single gene model update, valid-1, status:[pasa:asmbl_9300,status:12], valid-1 NODE_7712_length_414_cov_45.2212_potentialcontaminant . gene 1 386 . - . ID=g3004;Name=g3004.t1 NODE_7712_length_414_cov_45.2212_potentialcontaminant . mRNA 1 386 . - . ID=g3004.t1;Parent=g3004;Name=g3004.t1 NODE_7712_length_414_cov_45.2212_potentialcontaminant . five_prime_UTR 338 386 . - . ID=g3004.t1.utr5p1;Parent=g3004.t1 NODE_7712_length_414_cov_45.2212_potentialcontaminant . exon 1 386 . - . ID=g3004.t1.exon1;Parent=g3004.t1 NODE_7712_length_414_cov_45.2212_potentialcontaminant . CDS 1 337 . - 0 ID=cds.g3004.t1;Parent=g3004.t1;3_prime_partial=true #PROT g3004.t1 g3004 MQEALIYYVSKNALSTSECMEIRIWGCLVHESKFNLICLRPEIVVRKDDIVITGLLYENIDEIADIATVKGIATLAKWLAVVRETGTLLKRLSGSGKVVPPPEGFVLPDSKM # ORIGINAL: g13479.t1 original gene structure, not modified by PASA NODE_4055_length_2267_cov_38.5812 AUGUSTUS gene 193 1093 . + . ID=g13479;Name=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS mRNA 193 1093 . + . ID=g13479.t1;Parent=g13479;Name=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 193 460 . + . ID=g13479.t1.exon1;Parent=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 193 460 . + 0 ID=cds.g13479.t1;Parent=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 761 872 . + . ID=g13479.t1.exon2;Parent=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 761 872 . + 2 ID=cds.g13479.t1;Parent=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 997 1093 . + . ID=g13479.t1.exon3;Parent=g13479.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 997 1093 . + 1 ID=cds.g13479.t1;Parent=g13479.t1 #PROT g13479.t1 g13479 MNTSPTVAGAYVVLLSSPYCPCCNITQTQHNLTLSSPIADLHSSREQLCEASSTVSRAYLEFGLPYELACKTSIASLAATYKQPVFYDIYFHDGTTLKPVPIQVSNYRDTTGNLINTNSHKPQLTRRMFMVDAASGIPPGDAANQQRTLRFASSVVIS* # ORIGINAL: g13480.t1 original gene structure, not modified by PASA NODE_4055_length_2267_cov_38.5812 AUGUSTUS gene 1404 2114 . + . ID=g13480;Name=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS mRNA 1404 2114 . + . ID=g13480.t1;Parent=g13480;Name=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 1404 1499 . + . ID=g13480.t1.exon1;Parent=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 1404 1499 . + 0 ID=cds.g13480.t1;Parent=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 1799 1954 . + . ID=g13480.t1.exon2;Parent=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 1799 1954 . + 0 ID=cds.g13480.t1;Parent=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS exon 2064 2114 . + . ID=g13480.t1.exon3;Parent=g13480.t1 NODE_4055_length_2267_cov_38.5812 AUGUSTUS CDS 2064 2114 . + 0 ID=cds.g13480.t1;Parent=g13480.t1 #PROT g13480.t1 g13480 MELQDNGDGQIYIPLVYVSYADAVVGAGGSVAVGFTVQYSMSMSSTWRGLAIALAIFSAFAFVTSCFKLSAWRRRMRSNKMDFARTCAIVRFEINTIMRF* # PASA_UPDATE: g403.t1, single gene model update, valid-1, status:[pasa:asmbl_2345,status:13],[pasa:asmbl_2348,status:12], valid-1 # ORIGINAL: g403.t1.1.5b6be70a original gene structure, not modified by PASA NODE_1694_length_9672_cov_45.5691 . gene 173 5694 . - . ID=g403;Name=g403.t1 NODE_1694_length_9672_cov_45.5691 . mRNA 173 5694 . - . ID=g403.t1;Parent=g403;Name=g403.t1 NODE_1694_length_9672_cov_45.5691 . five_prime_UTR 5575 5694 . - . ID=g403.t1.utr5p1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 5250 5694 . - . ID=g403.t1.exon1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 5250 5574 . - 0 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 4755 5004 . - . ID=g403.t1.exon2;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 4755 5004 . - 2 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 4346 4510 . - . ID=g403.t1.exon3;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 4346 4510 . - 1 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 3851 4152 . - . ID=g403.t1.exon4;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 3851 4152 . - 1 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 3485 3687 . - . ID=g403.t1.exon5;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 3485 3687 . - 2 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 2917 3001 . - . ID=g403.t1.exon6;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 2917 3001 . - 0 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 2528 2618 . - . ID=g403.t1.exon7;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 2528 2618 . - 2 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 1228 2201 . - . ID=g403.t1.exon8;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . CDS 1703 2201 . - 1 ID=cds.g403.t1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 522 904 . - . ID=g403.t1.exon9;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . exon 173 305 . - . ID=g403.t1.exon10;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 1228 1702 . - . ID=g403.t1.utr3p1;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 522 904 . - . ID=g403.t1.utr3p2;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 173 305 . - . ID=g403.t1.utr3p3;Parent=g403.t1 NODE_1694_length_9672_cov_45.5691 . mRNA 173 5694 . - . ID=g403.t1.1.5b6be70a;Parent=g403;Name=g403.t1 NODE_1694_length_9672_cov_45.5691 . five_prime_UTR 5575 5694 . - . ID=g403.t1.1.5b6be70a.utr5p1;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 5250 5694 . - . ID=g403.t1.1.5b6be70a.exon1;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 5250 5574 . - 0 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 4755 5004 . - . ID=g403.t1.1.5b6be70a.exon2;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 4755 5004 . - 1 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 4346 4510 . - . ID=g403.t1.1.5b6be70a.exon3;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 4346 4510 . - 2 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 3851 4152 . - . ID=g403.t1.1.5b6be70a.exon4;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 3851 4152 . - 2 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 3485 3687 . - . ID=g403.t1.1.5b6be70a.exon5;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 3485 3687 . - 1 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 2917 3001 . - . ID=g403.t1.1.5b6be70a.exon6;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 2917 3001 . - 0 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 2528 2618 . - . ID=g403.t1.1.5b6be70a.exon7;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 2528 2618 . - 1 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 1228 2201 . - . ID=g403.t1.1.5b6be70a.exon8;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . CDS 1703 2201 . - 2 ID=cds.g403.t1.1.5b6be70a;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 522 904 . - . ID=g403.t1.1.5b6be70a.exon9;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . exon 173 305 . - . ID=g403.t1.1.5b6be70a.exon10;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 1228 1702 . - . ID=g403.t1.1.5b6be70a.utr3p1;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 522 904 . - . ID=g403.t1.1.5b6be70a.utr3p2;Parent=g403.t1.1.5b6be70a NODE_1694_length_9672_cov_45.5691 . three_prime_UTR 173 305 . - . ID=g403.t1.1.5b6be70a.utr3p3;Parent=g403.t1.1.5b6be70a #PROT g403.t1 g403 MMAARIATLAVFVFLVVSSAGVAAHKCIHDSLELEHPMVYSEQPEASRAKRADTYDRIRIGFDISNLSLNDRYTCTYAGQTFTVGTGARGTCADGNDKDCKVVCTAQDVLTSGGISYIINKLLKPAITLLEDRLSIVRPVGGVTLTTTSTCGSFGGVTVLTNYKTPGSSMMIGNWDAYDLVIFVTARPVFGSTIAWALSCQSDATTKRPIAGHINIGMLNIKLDNPLLDNYNIRVVVHELTHVLGFSAGISAYTAIQSTLADPAKSGASQTFITSARVLAQVRAQYNCPTMQGAPIEDYGGSGTAGSHWEKRIFRNEYMTGSAEQNSVISAVSLALFEDLGFYKADYSKAEYLAFGNAAGCTLATQSCGTWTGDFAICRDDPSAARPPRCTADGLAQAYCNTASYTSALLPYYQYFTTATTGGSDQLADFCPAYVGYSNGDCRDTTQNPNIQRTNVMDATGSYFSDSSRCFITDLTKTGYVKSGNSANCYPMACDPVNKRIVVTFAQGTSAVFTANCTAAAGGPLTVNKNGYTGTVTCPSYVSYCGNAPATGTPPGTSGTSTGTTGSGTSTTNTTVVSNTTTTTCPKNATIVCRTAGRQCGSVYDTCKLLTVQCGNNGLCALSTQVCQSGVCVTRKYDW* #PROT g403.t1.1.5b6be70a g403 MMAARIATLAVFVFLVVSSAGVAAHKCIHDSLELEHPMVYSEQPEASRAKRADTYDRIRIGFDISNLSLNDRYTCTYAGQTFTVGTGARGTCADGNDKDCKVVCTAQDVLTSGGISYIINKLLKPAITLLEDRLSIVRPVGGVTLTTTSTCGSFGGVTVLTNYKTPGSSMMIGNWDAYDLVIFVTARPVFGSTIAWALSCQSDATTKRPIAGHINIGMLNIKLDNPLLDNYNIRVVVHELTHVLGFSAGISAYTAIQSTLADPAKSGASQTFITSARVLAQVRAQYNCPTMQGAPIEDYGGSGTAGSHWEKRIFRNEYMTGSAEQNSVISAVSLALFEDLGFYKADYSKAEYLAFGNAAGCTLATQSCGTWTGDFAICRDDPSAARPPRCTADGLAQAYCNTASYTSALLPYYQYFTTATTGGSDQLADFCPAYVGYSNGDCRDTTQNPNIQRTNVMDATGSYFSDSSRCFITDLTKTGYVKSGNSANCYPMACDPVNKRIVVTFAQGTSAVFTANCTAAAGGPLTVNKNGYTGTVTCPSYVSYCGNAPATGTPPGTSGTSTGTTGSGTSTTNTTVVSNTTTTTCPKNATIVCRTAGRQCGSVYDTCKLLTVQCGNNGLCALSTQVCQSGVCVTRKYDW* # ORIGINAL: g404.t1 original gene structure, not modified by PASA NODE_1694_length_9672_cov_45.5691 AUGUSTUS gene 6405 8623 . + . ID=g404;Name=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS mRNA 6405 8623 . + . ID=g404.t1;Parent=g404;Name=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS exon 6405 7713 . + . ID=g404.t1.exon1;Parent=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS CDS 6405 7713 . + 0 ID=cds.g404.t1;Parent=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS exon 8127 8256 . + . ID=g404.t1.exon2;Parent=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS CDS 8127 8256 . + 2 ID=cds.g404.t1;Parent=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS exon 8512 8623 . + . ID=g404.t1.exon3;Parent=g404.t1 NODE_1694_length_9672_cov_45.5691 AUGUSTUS CDS 8512 8623 . + 1 ID=cds.g404.t1;Parent=g404.t1 #PROT g404.t1 g404 MLLSTARVALFASLLCSVVSTVSTHPEAVHSALRNPESDSDAGMVRDAGRAGRAVPAPGKYQLPLSSFPGGAGVPLLAYPIDNEFESYYERMSRVWYNYVRIDPIHFRESFMKPFMNGKDVSLPQVFNTDVYLKAALLPVPYELNLNRLARAHSADRLTCGTNVGLSPHNDCNSTAPGVRMANYVGGISPGGTNEIFFQFYPNAALRPLFTARVFPLYSIASFVCDGYGTGGFTMGACCTDRGNTTNSEFGCGSGSDGHRANIMNTNGAAACGWAWNAGHDITIITCNQIAPSSWTNAIKNGYEAAYPSVIYSGGHYFDSKNATKYGFIANIYTNGSTVVTAVVNIDGAEEALTLLSGDAGRGNYVTRTLVDTAPNALPTSFSACKPYYFSVVVEMSGKRTTHRYPTSGFYFTYYVAGCNANWAASVSGPVAVGNTGSSSSSGGLSAGGAAGIAIGVISIVLGAIGGVYYLRRRNSSASGSHTNRSSFVQRASVSNKFNSSVSDGIMLNSENPLHV* # ORIGINAL: g11361.t1 original gene structure, not modified by PASA NODE_4110_length_2176_cov_31.8363 AUGUSTUS gene 388 2056 . + . ID=g11361;Name=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS mRNA 388 2056 . + . ID=g11361.t1;Parent=g11361;Name=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS exon 388 498 . + . ID=g11361.t1.exon1;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS CDS 388 498 . + 0 ID=cds.g11361.t1;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS exon 775 901 . + . ID=g11361.t1.exon2;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS CDS 775 901 . + 0 ID=cds.g11361.t1;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS exon 1176 1277 . + . ID=g11361.t1.exon3;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS CDS 1176 1277 . + 2 ID=cds.g11361.t1;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS exon 1460 1582 . + . ID=g11361.t1.exon4;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS CDS 1460 1582 . + 2 ID=cds.g11361.t1;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS exon 1968 2056 . + . ID=g11361.t1.exon5;Parent=g11361.t1 NODE_4110_length_2176_cov_31.8363 AUGUSTUS CDS 1968 2056 . + 2 ID=cds.g11361.t1;Parent=g11361.t1 #PROT g11361.t1 g11361 KLATSQNDLEEEDLATKIRMWRKLSNELVKSKPQLKRVEDSTRPPMTRAKSLCQFEQLLESIRSSPVLRKVHLTTHRLPGADGPYYDSSIDRITVLLDSLAANDNIEPRNFEEEVRNLEAMDKEEFGSLARFPSMASLDLKLKDVVIEGTSSISDELKGMREQLQELKAVHMRVRKKLKQACR* # ORIGINAL: g2152.t1 original gene structure, not modified by PASA NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS gene 103 4157 . + . ID=g2152;Name=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS mRNA 103 4157 . + . ID=g2152.t1;Parent=g2152;Name=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 103 240 . + . ID=g2152.t1.exon1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 103 240 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 417 543 . + . ID=g2152.t1.exon2;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 417 543 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 657 760 . + . ID=g2152.t1.exon3;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 657 760 . + 2 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 970 1265 . + . ID=g2152.t1.exon4;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 970 1265 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 1415 1487 . + . ID=g2152.t1.exon5;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 1415 1487 . + 1 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 1703 1816 . + . ID=g2152.t1.exon6;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 1703 1816 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 1972 2139 . + . ID=g2152.t1.exon7;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 1972 2139 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 2315 2422 . + . ID=g2152.t1.exon8;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 2315 2422 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 2936 3019 . + . ID=g2152.t1.exon9;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 2936 3019 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS exon 3579 4157 . + . ID=g2152.t1.exon10;Parent=g2152.t1 NODE_3131_length_4239_cov_47.0848_potentialcontaminant AUGUSTUS CDS 3579 4157 . + 0 ID=cds.g2152.t1;Parent=g2152.t1 #PROT g2152.t1 g2152 MQAAAWQRLIPTFFLSDPALVISLWQGYTFLRSDPKLFLIANGNGTTVYDSSMGTASPSHYQFWDGFLRSEENDMSGILFSDSDGKSTEYKGFYFVFARRVVYVDPATNKTHAAAFSIAHDMEISAKRHSAALGICVSLSILDGVNTNSADAKIYQLGEQSLLASPELVLAGSLLTIFDSTSAPKPFFWRKSSSAAKYGDDPLCPGVAIAASDAGYAIVALRDVFGRPRVALGAAFANGITSVSSSSARFIEITSIVGGAVFALVVAAILELTVLRRVARITSEVSRIALDGCLASRIRLSGRRDELYKLGVHINSMIDTIEKHVSVEASANAKSHFLSKMSHELRNPLNAVMGIFHLLKETPLDADQRDMLRSAEKLDVSSELNPITLLENVVEAHAYQAQEKLSNAVKFTSSGTIVASVSIISRESADGLLHFSSRSSRTTPSPRTVPASSACPDVRGDPRVDEAELCTGLGRDTIGSVSVEIEGEGERDTTASWESEKKCATGQGVASARDVRVGAGADAEDIIWLKFAVQDTGIGIRPDDIGKLFKLFSQVRDRILALCLVCECVENRLDMRVSLSLYTVRLVYVIIRIRSQ* # ORIGINAL: g3776.t1 original gene structure, not modified by PASA NODE_1272_length_12514_cov_42.662 AUGUSTUS gene 10773 12374 . + . ID=g3776;Name=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS mRNA 10773 12374 . + . ID=g3776.t1;Parent=g3776;Name=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 10773 10861 . + . ID=g3776.t1.exon1;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 10773 10861 . + 0 ID=cds.g3776.t1;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 11057 11123 . + . ID=g3776.t1.exon2;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 11057 11123 . + 1 ID=cds.g3776.t1;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 11306 11410 . + . ID=g3776.t1.exon3;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 11306 11410 . + 0 ID=cds.g3776.t1;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 11577 11840 . + . ID=g3776.t1.exon4;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 11577 11840 . + 0 ID=cds.g3776.t1;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 12127 12374 . + . ID=g3776.t1.exon5;Parent=g3776.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 12127 12374 . + 0 ID=cds.g3776.t1;Parent=g3776.t1 #PROT g3776.t1 g3776 MADAKAHLYRLVDRVMNMSSPFTGSSAGAGSTTPARGKEKEKDESVPRESIKVCLRVRPLGVKEIARGERTCLFVRNDTTVHVVPPKATRTRTEAVYSFSRVFGETSTQKEVFETVALPLFRDAIDGRNALLFTYGSTNSGKTHTMQGSENDPGVLVRGLDVVFNTIGDNLAEPCIFVADGKDTIAVQSRESARADHRRRQKRTRVRFGAEDEAEGGRRRRSTSVALEADCDSAYAVFVSYVEIYNEQIFDLLDENR # ORIGINAL: g3775.t1 original gene structure, not modified by PASA NODE_1272_length_12514_cov_42.662 AUGUSTUS gene 8148 10026 . - . ID=g3775;Name=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS mRNA 8148 10026 . - . ID=g3775.t1;Parent=g3775;Name=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 9931 10026 . - . ID=g3775.t1.exon1;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 9931 10026 . - 0 ID=cds.g3775.t1;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 9687 9784 . - . ID=g3775.t1.exon2;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 9687 9784 . - 0 ID=cds.g3775.t1;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 9359 9548 . - . ID=g3775.t1.exon3;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 9359 9548 . - 1 ID=cds.g3775.t1;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 9048 9176 . - . ID=g3775.t1.exon4;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 9048 9176 . - 0 ID=cds.g3775.t1;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS exon 8148 8870 . - . ID=g3775.t1.exon5;Parent=g3775.t1 NODE_1272_length_12514_cov_42.662 AUGUSTUS CDS 8148 8870 . - 0 ID=cds.g3775.t1;Parent=g3775.t1 #PROT g3775.t1 g3775 MQFVRSLSHPDEIFALARYGLGLASVMPTKGGEKMTPTMVKCYELLDMTSRSFSAVIRALDGELRPAICLFYLVLRGLDTIEDDMTIPIEKKVPLLRNFYKRIYERGWTFTESGENEKDRHLLVQFDQVICEFLSLAPFYQEVISDITRRMGDGMAEYLTKTVTTMEEWDQYCHYVAGLVGIGLSRLFSASGLEDPIVGKDERLANSMGLFLQKTNIIRDYLEDIIDGRIFWPKQTWSKYRPALADFRAKEHRREALGCLNDLITNALAHVPDVFEYMSRIRNQSVFNFCAIPQVMAIATLSLCYDNGGVFEGVVKIRKGLAVKLMLDATNMDALHRTFADFASDIERCVRNDDPNAATTRLLASKVVRLAQSAAPVPRSKGALDVGTYPHGLIVIVLLMASYYFTVHRNH* # PASA_UPDATE: g3774.t1, single gene model update, valid-1, status:[pasa:asmbl_1039,status:12], valid-1 NODE_1272_length_12514_cov_42.662 . gene 115 5890 . - . ID=g3774;Name=g3774.t1 NODE_1272_length_12514_cov_42.662 . mRNA 115 5890 . - . ID=g3774.t1;Parent=g3774;Name=g3774.t1 NODE_1272_length_12514_cov_42.662 . five_prime_UTR 5414 5890 . - . ID=g3774.t1.utr5p1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 5282 5890 . - . ID=g3774.t1.exon1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 5282 5413 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 4460 4796 . - . ID=g3774.t1.exon2;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 4460 4796 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 4083 4276 . - . ID=g3774.t1.exon3;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 4083 4276 . - 2 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 3753 3836 . - . ID=g3774.t1.exon4;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 3753 3836 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 3443 3557 . - . ID=g3774.t1.exon5;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 3443 3557 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 2932 2999 . - . ID=g3774.t1.exon6;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 2932 2999 . - 2 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 2391 2648 . - . ID=g3774.t1.exon7;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 2391 2648 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 2073 2141 . - . ID=g3774.t1.exon8;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 2073 2141 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 1587 1751 . - . ID=g3774.t1.exon9;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 1587 1751 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 1228 1302 . - . ID=g3774.t1.exon10;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 1228 1302 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 861 1002 . - . ID=g3774.t1.exon11;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 861 1002 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 369 595 . - . ID=g3774.t1.exon12;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 369 595 . - 2 ID=cds.g3774.t1;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . exon 115 246 . - . ID=g3774.t1.exon13;Parent=g3774.t1 NODE_1272_length_12514_cov_42.662 . CDS 115 246 . - 0 ID=cds.g3774.t1;Parent=g3774.t1 #PROT g3774.t1 g3774 MFGGGDEIVALEAEFSDLEALREKPAQMAVFMNYLLSSSMPETLFFHLEIVAYRALFDEHGKKHCDKDPLEMATQLFGAYFAPNALLKIEVDEPELLSDATRRLTEAATDGDAAGLANLFDDLDDYSRSSLEELLDQFKKSLALGLGDLYGVGELQGIIQGDPTAPPPASVALELLQPHLSAACDESQAQDKKRSRLILASLLGFLTKVGVDPKALQEYSGHLDKGPQQKNSGGGFKLLRAASQKKKVKVHVHSNHQFVATHYNYPTFCDHCGDLLWGIGNQGYQCTACGFNCHKRKCNDELKDPCGGPKSRKPSTTASPNSPRKLFSMDSLRISSRRQPGDQPSERRSLMDSSMTSSTSSVDLVVPGQSARRKSVSDASVSRDISIRPSIVIDEGFVDRLQVPQQVRRFSQGDDAPDVVDISPLPPTPQSPTAPLTSGVRYARGSVTAPPLEMPLGMMPLDRSHSTNDLDVRKASAEFVDITRSPSLRKSASGSNTDVSHPPLRKQNSFILPSVEKMASNWVELATPELLEELSKKEKKRQEVIFELVKTEVNYISDMMAMQTVFYQPLRKFRILAGDQIAGIFVNVDEIVDLNLDLCKALVERQQESTFVEVIGDIFAEKFEGFTIYGAFCGNQTRALEDLQLYRRKNAQFASFLKVDAPQST* # ORIGINAL: g2985.t1 original gene structure, not modified by PASA NODE_5816_length_708_cov_95.0142_potentialcontaminant AUGUSTUS gene 312 708 . + . ID=g2985;Name=g2985.t1 NODE_5816_length_708_cov_95.0142_potentialcontaminant AUGUSTUS mRNA 312 708 . + . ID=g2985.t1;Parent=g2985;Name=g2985.t1 NODE_5816_length_708_cov_95.0142_potentialcontaminant AUGUSTUS exon 312 708 . + . ID=g2985.t1.exon1;Parent=g2985.t1 NODE_5816_length_708_cov_95.0142_potentialcontaminant AUGUSTUS CDS 312 708 . + 0 ID=cds.g2985.t1;Parent=g2985.t1 #PROT g2985.t1 g2985 MAGVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSSLHTHLRHVRLFHLWPMYNRMYIEDAQFRDEVRTTIPVDRLVLVSFDQNSQDLSAFEGVHAALVNVPKHGSRRYTTCSAADLTPLNNVHTVEIRLD # PASA_UPDATE: g10787.t1, single gene model update, valid-1, status:[pasa:asmbl_4200,status:12], valid-1 NODE_238_length_29902_cov_44.7081 . gene 23181 25111 . + . ID=g10787;Name=g10787.t1 NODE_238_length_29902_cov_44.7081 . mRNA 23181 25111 . + . ID=g10787.t1;Parent=g10787;Name=g10787.t1 NODE_238_length_29902_cov_44.7081 . five_prime_UTR 23181 23320 . + . ID=g10787.t1.utr5p1;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . exon 23181 23335 . + . ID=g10787.t1.exon1;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . CDS 23321 23335 . + 0 ID=cds.g10787.t1;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . exon 23991 24086 . + . ID=g10787.t1.exon2;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . CDS 23991 24086 . + 0 ID=cds.g10787.t1;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . exon 24787 25111 . + . ID=g10787.t1.exon3;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . CDS 24787 24954 . + 0 ID=cds.g10787.t1;Parent=g10787.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 24955 25111 . + . ID=g10787.t1.utr3p1;Parent=g10787.t1 #PROT g10787.t1 g10787 METGGANVAGEEAKIKDKYGGLPKKNELVMKRMNKAGDRKYFDSGDYALCQAGKQTSKPLGQEIPNPESIPHKDGSAKPKHSKLAEAPPAAN* # PASA_UPDATE: g10783.t1, single gene model update, valid-1, status:[pasa:asmbl_4199,status:3], valid-1 NODE_238_length_29902_cov_44.7081 . gene 8529 11520 . + . ID=g10783;Name=g10783.t1 NODE_238_length_29902_cov_44.7081 . mRNA 8529 11520 . + . ID=g10783.t1;Parent=g10783;Name=g10783.t1 NODE_238_length_29902_cov_44.7081 . five_prime_UTR 8529 8743 . + . ID=g10783.t1.utr5p1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 8529 8857 . + . ID=g10783.t1.exon1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 8744 8857 . + 0 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 9187 9259 . + . ID=g10783.t1.exon2;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 9187 9259 . + 0 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 9622 9869 . + . ID=g10783.t1.exon3;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 9622 9869 . + 2 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 10244 10365 . + . ID=g10783.t1.exon4;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 10244 10365 . + 0 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 10729 10840 . + . ID=g10783.t1.exon5;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 10729 10840 . + 1 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . exon 11295 11520 . + . ID=g10783.t1.exon6;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . CDS 11295 11423 . + 0 ID=cds.g10783.t1;Parent=g10783.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 11424 11520 . + . ID=g10783.t1.utr3p1;Parent=g10783.t1 #PROT g10783.t1 g10783 MAQGGLQAAVKLYEGLKQEWGKKPADLDKCGQILAQLKIALLGLSFLPSDASKPSKQELLLAREVLEVGAQWSIRRKDIPSFERYMAQLKPYYLDYGRELPQSAYAYQMLGLNLLRLLAQNRIAEFHSEIELVDPKELLSNIYLKHPIALEQYLMEGSYNKVFLARGNVPADSYAFFMDILMGTIRSEIADCSEKAYARIPVDEAKTILYFDKAEELSAFASERGWRLVDRAYVFESPEKPAPALHSGELLRRCLNYARELEQIV* # PASA_UPDATE: g10785.t1, single gene model update, valid-1, status:[pasa:asmbl_4194,status:12],[pasa:asmbl_4203,status:12], valid-1 NODE_238_length_29902_cov_44.7081 . gene 14348 16663 . - . ID=g10785;Name=g10785.t1 NODE_238_length_29902_cov_44.7081 . mRNA 14348 16663 . - . ID=g10785.t1;Parent=g10785;Name=g10785.t1 NODE_238_length_29902_cov_44.7081 . exon 16211 16663 . - . ID=g10785.t1.exon1;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . CDS 16211 16663 . - 0 ID=cds.g10785.t1;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . exon 15217 16014 . - . ID=g10785.t1.exon2;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . CDS 15217 16014 . - 0 ID=cds.g10785.t1;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . exon 14794 14882 . - . ID=g10785.t1.exon3;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . CDS 14794 14882 . - 0 ID=cds.g10785.t1;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . exon 14348 14654 . - . ID=g10785.t1.exon4;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . CDS 14567 14654 . - 1 ID=cds.g10785.t1;Parent=g10785.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 14348 14566 . - . ID=g10785.t1.utr3p1;Parent=g10785.t1 #PROT g10785.t1 g10785 MAVTSRLIFEALDLVSLAFSLFLELFFGRLPTKASHRQQYATIVSAAARLLFSRVRVDNVCATVKLWDGSSHTFGKQSTRDGVDGALHPSRAFVMHMRHPGTLRLWLLREDALMGFAEAFINSYLDVDGDFEACFMYLDSLRRVRLSLMQKVSLVALLSVLPTLSIPSEGIAFGGAVDKSRSTKHSIQRDKDAVAYHYDVGNDFYAMFLDRSLGYTTAHFRHDAENFDDAWANKYESACRKLQIRENDKVADIGCGWGGFVRYAAQTRRASVHGVTISQKQVDLANERIAADRLESLARVEYRHYKEVPRVRTFDKIAAFQCTEHMDEWRLHEFFSHMWDLLPPGGLILVEFMTARVRLGCHPFFDRYVFPDGQQFPLHVALAQAEAVGFELRDVEGMREDYLRTIRQWNRGLASSKDAAEASVGSIRYRIWRLYLQYAAYAYSINRFNCYQCVWMKTVRDTTPIYRRPNGVLTE* # PASA_UPDATE: g10784.t1, single gene model update, valid-1, status:[pasa:asmbl_4202,status:12], valid-1 NODE_238_length_29902_cov_44.7081 . gene 11695 14197 . - . ID=g10784;Name=g10784.t1 NODE_238_length_29902_cov_44.7081 . mRNA 11695 14197 . - . ID=g10784.t1;Parent=g10784;Name=g10784.t1 NODE_238_length_29902_cov_44.7081 . five_prime_UTR 14113 14197 . - . ID=g10784.t1.utr5p1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . exon 13498 14197 . - . ID=g10784.t1.exon1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . CDS 13498 14112 . - 0 ID=cds.g10784.t1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . exon 13238 13344 . - . ID=g10784.t1.exon2;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . CDS 13238 13344 . - 0 ID=cds.g10784.t1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . exon 12801 12939 . - . ID=g10784.t1.exon3;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . CDS 12801 12939 . - 1 ID=cds.g10784.t1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . exon 12492 12657 . - . ID=g10784.t1.exon4;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . CDS 12492 12657 . - 0 ID=cds.g10784.t1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . exon 11695 12321 . - . ID=g10784.t1.exon5;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . CDS 11786 12321 . - 2 ID=cds.g10784.t1;Parent=g10784.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 11695 11785 . - . ID=g10784.t1.utr3p1;Parent=g10784.t1 #PROT g10784.t1 g10784 MAGAHHLAALVIALLACAAAADATFIWPMPAGVSSGNETLSLIPSTFVFNHKSKSAILAKAIERYAGLIFPHGSHVAASQAAPVLPHMDVQISSDDETLTLGTDESYTLLVLTDGSGALLRAPTVYGALRGLETFSQLVTFDFDAKAYLLHSAPWGVEDVPRFAHRGLLMDTSRHFQPVPELKILLDAMSYTKLNVLHWHIVDSQSFPMEVASYPKLWAGAYSADERYTQDDLADVVQYAKERGIRVVPEFDGPGHAASWCVGYPEACPSSTCLEPLNPATNFTFDLIESLLGEVTGRKAGGGLFPDALIHLGGDEVNTDCWTNTPAIASWMASNNLTADGAYMYFVKRVHEIALAQGRQPIAWEEVFNHFSTNLDKRSIIHIWLDQRNMAKVVANGYRSILSDTYWYLDHLDVTWSTLYTNDPHLGIDDPAEQALVLGAEVCMWGETVDASDLQATVWPRAAAGAERLWSPRTVSDASAAAERIAYFRCLLTRRGVGAAPLDNNAARAPPSGPGGCRSQ* # PASA_UPDATE: g10782.t1, single gene model update, valid-1, status:[pasa:asmbl_4201,status:3], valid-1 NODE_238_length_29902_cov_44.7081 . gene 5952 8051 . - . ID=g10782;Name=g10782.t1 NODE_238_length_29902_cov_44.7081 . mRNA 5952 8051 . - . ID=g10782.t1;Parent=g10782;Name=g10782.t1 NODE_238_length_29902_cov_44.7081 . five_prime_UTR 7921 8051 . - . ID=g10782.t1.utr5p1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 7782 8051 . - . ID=g10782.t1.exon1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 7782 7920 . - 0 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 7590 7650 . - . ID=g10782.t1.exon2;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 7590 7650 . - 2 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 7357 7453 . - . ID=g10782.t1.exon3;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 7357 7453 . - 1 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 6899 6961 . - . ID=g10782.t1.exon4;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 6899 6961 . - 0 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 6764 6796 . - . ID=g10782.t1.exon5;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 6764 6796 . - 0 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 6541 6570 . - . ID=g10782.t1.exon6;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 6541 6570 . - 0 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . exon 5952 6205 . - . ID=g10782.t1.exon7;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . CDS 6074 6205 . - 0 ID=cds.g10782.t1;Parent=g10782.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 5952 6073 . - . ID=g10782.t1.utr3p1;Parent=g10782.t1 #PROT g10782.t1 g10782 MALRRSIIPAASWLSRPLCAAAATAKPTRGINEFFEIIPPEESTEYGRSWKASELRGKSNAELHQLWYILLKERNLVMTMQHEARARKAKVPYKPRMVKVKKAMAAIHTVIGERENALRQAKDAVVNEAVEKAMVIYKEQLSTTGSKASIDMNAVYEAAYAAARPITADSETGAEEKKASEASS* # ORIGINAL: g10781.t1 original gene structure, not modified by PASA NODE_238_length_29902_cov_44.7081 AUGUSTUS gene 261 5277 . - . ID=g10781;Name=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS mRNA 261 5277 . - . ID=g10781.t1;Parent=g10781;Name=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 5133 5277 . - . ID=g10781.t1.exon1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 5133 5277 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 4664 4902 . - . ID=g10781.t1.exon2;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 4664 4902 . - 2 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 4223 4364 . - . ID=g10781.t1.exon3;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 4223 4364 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 3781 3838 . - . ID=g10781.t1.exon4;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 3781 3838 . - 2 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 3123 3390 . - . ID=g10781.t1.exon5;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 3123 3390 . - 1 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 2225 2357 . - . ID=g10781.t1.exon6;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 2225 2357 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 1839 1939 . - . ID=g10781.t1.exon7;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 1839 1939 . - 2 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 1517 1618 . - . ID=g10781.t1.exon8;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 1517 1618 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 992 1159 . - . ID=g10781.t1.exon9;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 992 1159 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 487 558 . - . ID=g10781.t1.exon10;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 487 558 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 261 332 . - . ID=g10781.t1.exon11;Parent=g10781.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 261 332 . - 0 ID=cds.g10781.t1;Parent=g10781.t1 #PROT g10781.t1 g10781 MVFACQRDAYLREYEATVVSCVAAATATASAKAGDADAAEYDVILDDTESNGKEAKEGKKGACDGGIKCMSTVCGMYLLGWSACGVGCPESQLFTGGCCGDVWSVTLCICLHAVLFPEGGGQPCDYGMIGDVPVVRVIRSGDKAVHRTRKPLSIGEKVRVSVDWERRWQHMQQHSAQHLISAIAEHKYGIKTTCWHLGPVICDVEFEGKDLPPSLVSEIESVCNGHIRSHVPVRTVEVAREDLGEVRSRGIPADVTGPIRVVIIEGIDDNNCCGTHVTNLSELQAVKFLKSEPTRGCTRVHFVAGERVFTCFASMLSQELELTKIFSCGPEEHATRANAIIKSNRAFQKDAKGFLKELAELQGKALVPENGFGHVHRCEGDLDYASTIASAAPQCKLTQFHPLLSAVVICGVVIVPIMLLLMQVLFVTVGGKDGVAQGEGQFLLCGPDDFVKVNGAKAAALMGGKGGGRAGRFQGKVTDLSGRDNAINLLREAVATLGC* # ORIGINAL: g10786.t1 original gene structure, not modified by PASA NODE_238_length_29902_cov_44.7081 AUGUSTUS gene 18675 22494 . - . ID=g10786;Name=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS mRNA 18675 22494 . - . ID=g10786.t1;Parent=g10786;Name=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 22345 22494 . - . ID=g10786.t1.exon1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 22345 22494 . - 0 ID=cds.g10786.t1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 20233 22183 . - . ID=g10786.t1.exon2;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 20233 22183 . - 0 ID=cds.g10786.t1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 19907 19985 . - . ID=g10786.t1.exon3;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 19907 19985 . - 2 ID=cds.g10786.t1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 19706 19784 . - . ID=g10786.t1.exon4;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 19706 19784 . - 1 ID=cds.g10786.t1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 19384 19485 . - . ID=g10786.t1.exon5;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 19384 19485 . - 0 ID=cds.g10786.t1;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 18675 18923 . - . ID=g10786.t1.exon6;Parent=g10786.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 18675 18923 . - 0 ID=cds.g10786.t1;Parent=g10786.t1 #PROT g10786.t1 g10786 MAAVSAIMSAASSAVTFGEPYVLARGGGAVGRVVGAAPHSDKDNVVVTLQGVGVHVYRVSDQKNVAGWSTRGDLNLTHHAVQSAGGRTFYAARDGNVLLSWASDVSDIEKAAAKAQMRDTIVAIVPHSGDDGACVFLANGESLVFEKGAAAAPGARARQAPSVGGRVRAVHVTGDAVAAAWIGGGDHPGVTVELYVVGESASLARLVRLAPPAHVTPLAPDVLSWAFDAVSQRACVWYAGGLLGVYDVPPQTHAAAPLSPRLTVVLGAIAPPVGTHGHVGNGVAPKGKTPKKGERAADASSAPLLDTLFAFDGTYVAVGGILRADIALFEAKAGPVVAVVDTTYGTLQGLARVAPSEAAESQVPRMLLRSPRDPGLFIAAVGGAALVCPLHCERMTLSHAMGRMRLTQHLAGSAPASGGQKTHDGRGASAQPWPTHAPAPQIATGAAVLAPPSADPADWSARVAAEAAEEEEVLRRLSHPGETPDLASFSALFASFMSSRKASARSELPVTPPLQSQAHVTVSAVDAESASKPLKRKARKQQQAAAGAGAGGDADAVPREAADKGDKGDKDKRTGGRVGPNQQRPAGAAAVPGTPTVRSAPLPNEGARLSHRFVVCVCERILGEKRFFAASELRQLLGSGCVSARDLPTLIPRLLELGELGLFGTALSRVHDVPDQTLVECIRHFVHADPDVLSAKIAEIEADRQRRKKNLTRMTVKETDPPMDPFLCAIVSAPRNDVFLQDALRELTMDETLALLQFLFRWAERYATKRTHKLKRRVFIRIPTFAEILDWCSVVLDARFVDFVLVGGAHPAMSSLAELVSGQRALCEGMQGLKGQLSQLLARAGDTHGAKAQDEARDIGIYGVELLVI* # ORIGINAL: g10789.t1 original gene structure, not modified by PASA NODE_238_length_29902_cov_44.7081 AUGUSTUS gene 27782 29877 . - . ID=g10789;Name=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS mRNA 27782 29877 . - . ID=g10789.t1;Parent=g10789;Name=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 29869 29877 . - . ID=g10789.t1.exon1;Parent=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 29869 29877 . - 0 ID=cds.g10789.t1;Parent=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 29465 29674 . - . ID=g10789.t1.exon2;Parent=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 29465 29674 . - 0 ID=cds.g10789.t1;Parent=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS exon 27782 29188 . - . ID=g10789.t1.exon3;Parent=g10789.t1 NODE_238_length_29902_cov_44.7081 AUGUSTUS CDS 27782 29188 . - 0 ID=cds.g10789.t1;Parent=g10789.t1 #PROT g10789.t1 g10789 MAGINLDGDVEYDLRCNVAVPGAGDFEAYVGPSGSGTSREKHTAPSVTDAVGSASFVISRKTVHGQSLEIAVKAFGVPLCAYTVSLTPRLDAMTTGKASTTTLPALVSPSSPSSPSPSPASDGGRVCPNCRESVPTERYALHSAYCERNNTYCGVCQRAVRRNDSGHVHCADCGMLTPTPAVAAKHAALRHVPVPCECGAILRDASHVPHHVTSECPRRMTTCRFCGNQVRAGPPASDAGDRVRGFTEHESRCGGRREDCRDCGRPVRLRDLEKHAQVHAFDRRSQSQPQQQHGPGHASPQRPAHRQPLVDDAARNAAWERAFPAAGSVGLGESARDWAGAPMDVDGPTARATPSPAPAMIASPPPETPPTARPALLCANESCGYAREAKAATEPSGAALGALCGRCASVVTGGGVGGGGSASDLLGRLIRLYYAQLTAGCGVSGCANPRCVAGGSTPLLPADAALRAVEMAREATLSPPVMYACPPPSPEGRMRAEAVRSLGEMGFPRAWCVRALDVTGNDTAAAAVWLLNNAQSIVASV* # PASA_UPDATE: g10788.t1, single gene model update, valid-1, status:[pasa:asmbl_4204,status:12], valid-1 NODE_238_length_29902_cov_44.7081 . gene 25771 27064 . - . ID=g10788;Name=g10788.t1 NODE_238_length_29902_cov_44.7081 . mRNA 25771 27064 . - . ID=g10788.t1;Parent=g10788;Name=g10788.t1 NODE_238_length_29902_cov_44.7081 . five_prime_UTR 27035 27064 . - . ID=g10788.t1.utr5p1;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . exon 26787 27064 . - . ID=g10788.t1.exon1;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . CDS 26787 27034 . - 0 ID=cds.g10788.t1;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . exon 26056 26573 . - . ID=g10788.t1.exon2;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . CDS 26171 26573 . - 1 ID=cds.g10788.t1;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . exon 25771 25887 . - . ID=g10788.t1.exon3;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 26056 26170 . - . ID=g10788.t1.utr3p1;Parent=g10788.t1 NODE_238_length_29902_cov_44.7081 . three_prime_UTR 25771 25887 . - . ID=g10788.t1.utr3p2;Parent=g10788.t1 #PROT g10788.t1 g10788 MASICTQRRYTNIVFDLGGVLIDWDPHAIASRMFAADPSTEVDASDVSAVARATRHPAWKAYNAGALDVDGVVHLLAADGVNPVLMRRFATDYSAYTPTLEGGLRALARVHSAGHYRTFILSNYPRGPYEALLSTHGDAWMGAFDGATVSYAVGETKPSAAIYERFLRDHSLSASDCLFIDDKHENIAAAKGAGIDGIVCSNPDALVGVLEAMRVL* # ORIGINAL: g2706.t1 original gene structure, not modified by PASA NODE_19590_length_158_cov_29.5422_potentialcontaminant AUGUSTUS gene 1 111 . - . ID=g2706;Name=g2706.t1 NODE_19590_length_158_cov_29.5422_potentialcontaminant AUGUSTUS mRNA 1 111 . - . ID=g2706.t1;Parent=g2706;Name=g2706.t1 NODE_19590_length_158_cov_29.5422_potentialcontaminant AUGUSTUS exon 1 111 . - . ID=g2706.t1.exon1;Parent=g2706.t1 NODE_19590_length_158_cov_29.5422_potentialcontaminant AUGUSTUS CDS 1 111 . - 0 ID=cds.g2706.t1;Parent=g2706.t1 #PROT g2706.t1 g2706 MVVAGPRPPNVAEKGWKLSPNAQVIVKIADMGLSKDT # PASA_UPDATE: g1302.t1, single gene model update, valid-1, status:[pasa:asmbl_3440,status:3], valid-1 NODE_2079_length_7837_cov_40.1656 . gene 5380 7746 . - . ID=g1302;Name=g1302.t1 NODE_2079_length_7837_cov_40.1656 . mRNA 5380 7746 . - . ID=g1302.t1;Parent=g1302;Name=g1302.t1 NODE_2079_length_7837_cov_40.1656 . five_prime_UTR 7737 7746 . - . ID=g1302.t1.utr5p1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . exon 7582 7746 . - . ID=g1302.t1.exon1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . CDS 7582 7736 . - 0 ID=cds.g1302.t1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . exon 7267 7381 . - . ID=g1302.t1.exon2;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . CDS 7267 7381 . - 1 ID=cds.g1302.t1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . exon 6943 7005 . - . ID=g1302.t1.exon3;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . CDS 6943 7005 . - 0 ID=cds.g1302.t1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . exon 6584 6661 . - . ID=g1302.t1.exon4;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . CDS 6584 6661 . - 0 ID=cds.g1302.t1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . exon 5380 6277 . - . ID=g1302.t1.exon5;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . CDS 5999 6277 . - 0 ID=cds.g1302.t1;Parent=g1302.t1 NODE_2079_length_7837_cov_40.1656 . three_prime_UTR 5380 5998 . - . ID=g1302.t1.utr3p1;Parent=g1302.t1 #PROT g1302.t1 g1302 MYAQDSIDLLTRSGINFKRFEQDGVDVQHFAELLIPSGVVLNESVRWISFHSGYDFAYLLKVLTCQPLPSEENEFFDLLRLYFPCLYDIKYLMKSCKTLKGGLQEVADDLEVERVGPQHQAGSDSMLTCFAFFKMRQVFFEERIDDSKYLGHLYGLGAGAFTGGYQNQPYIVGTNGEAHDATPSDRLDGSVASRVTGNIIGQNVVNGSPGLVRITAGGHQRGGWNDGRD* # PASA_UPDATE: g1300.t1, single gene model update, valid-1, status:[pasa:asmbl_3439,status:3], valid-1 NODE_2079_length_7837_cov_40.1656 . gene 1058 3397 . - . ID=g1300;Name=g1300.t1 NODE_2079_length_7837_cov_40.1656 . mRNA 1058 3397 . - . ID=g1300.t1;Parent=g1300;Name=g1300.t1 NODE_2079_length_7837_cov_40.1656 . five_prime_UTR 3318 3397 . - . ID=g1300.t1.utr5p1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 3183 3397 . - . ID=g1300.t1.exon1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 3183 3317 . - 0 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 2830 2980 . - . ID=g1300.t1.exon2;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 2830 2980 . - 0 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 2436 2647 . - . ID=g1300.t1.exon3;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 2436 2647 . - 2 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 2171 2200 . - . ID=g1300.t1.exon4;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 2171 2200 . - 0 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 1784 1988 . - . ID=g1300.t1.exon5;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 1784 1988 . - 0 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . exon 1058 1529 . - . ID=g1300.t1.exon6;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . CDS 1432 1529 . - 2 ID=cds.g1300.t1;Parent=g1300.t1 NODE_2079_length_7837_cov_40.1656 . three_prime_UTR 1058 1431 . - . ID=g1300.t1.utr3p1;Parent=g1300.t1 #PROT g1300.t1 g1300 MMLSSSKSLFKGIDAPSHTPKDAAASFMPNIDMPMDSFAVAPTADPVGFLQSHTEGHSADNIHIKIEHGTTTLAFKFRHGIIVAVDSRATGGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRLYELRNKERISVAAASKMLANMVYAYKGMGLSMGTMITGWDKRGPELFYVDSDGTRLHGNLFSVGSGSTYAYGVLDSGYNYEMTAEQAIDLARRSIYHATHRDAYSGGVVNIYHVQEAGWVKISQDDVTELHYKYRAEIDGTA* # PASA_UPDATE: g1301.t1, single gene model update, valid-1, status:[pasa:asmbl_3442,status:12], valid-1 NODE_2079_length_7837_cov_40.1656 . gene 3891 5068 . + . ID=g1301;Name=g1301.t1 NODE_2079_length_7837_cov_40.1656 . mRNA 3891 5068 . + . ID=g1301.t1;Parent=g1301;Name=g1301.t1 NODE_2079_length_7837_cov_40.1656 . exon 3891 3895 . + . ID=g1301.t1.exon1;Parent=g1301.t1 NODE_2079_length_7837_cov_40.1656 . CDS 3891 3895 . + 0 ID=cds.g1301.t1;Parent=g1301.t1 NODE_2079_length_7837_cov_40.1656 . exon 4251 5068 . + . ID=g1301.t1.exon2;Parent=g1301.t1 NODE_2079_length_7837_cov_40.1656 . CDS 4251 4611 . + 1 ID=cds.g1301.t1;Parent=g1301.t1 NODE_2079_length_7837_cov_40.1656 . three_prime_UTR 4612 5068 . + . ID=g1301.t1.utr3p1;Parent=g1301.t1 #PROT g1301.t1 g1301 MATKAKSEMTAEELAQKEEEEFNKGPLSVLTQSVRNSTQVLINCRNNRKLLARVKAFDRHCNMVLENVQEMWTEVPKTGKGKKKAKPINKDRFISKMFLRGDSVILVLRNPSGNPTTVVQA* # PASA_UPDATE: g1299.t1, single gene model update, valid-1, status:[pasa:asmbl_3441,status:12], valid-1 NODE_2079_length_7837_cov_40.1656 . gene 123 649 . - . ID=g1299;Name=g1299.t1 NODE_2079_length_7837_cov_40.1656 . mRNA 123 649 . - . ID=g1299.t1;Parent=g1299;Name=g1299.t1 NODE_2079_length_7837_cov_40.1656 . five_prime_UTR 263 649 . - . ID=g1299.t1.utr5p1;Parent=g1299.t1 NODE_2079_length_7837_cov_40.1656 . exon 123 649 . - . ID=g1299.t1.exon1;Parent=g1299.t1 NODE_2079_length_7837_cov_40.1656 . CDS 123 262 . - 0 ID=cds.g1299.t1;Parent=g1299.t1;3_prime_partial=true #PROT g1299.t1 g1299 MLRTSSDMARGRGAHRFTLLMLEHGETYVEDFSAYQVPIGKEDARK # ORIGINAL: g1768.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 8573 10608 . + . ID=g1768;Name=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 8573 10608 . + . ID=g1768.t1;Parent=g1768;Name=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 8573 8704 . + . ID=g1768.t1.exon1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 8573 8704 . + 0 ID=cds.g1768.t1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 8870 8999 . + . ID=g1768.t1.exon2;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 8870 8999 . + 0 ID=cds.g1768.t1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 9123 9413 . + . ID=g1768.t1.exon3;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 9123 9413 . + 2 ID=cds.g1768.t1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 9705 9976 . + . ID=g1768.t1.exon4;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 9705 9976 . + 2 ID=cds.g1768.t1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 10217 10364 . + . ID=g1768.t1.exon5;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 10217 10364 . + 0 ID=cds.g1768.t1;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 10580 10608 . + . ID=g1768.t1.exon6;Parent=g1768.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 10580 10608 . + 2 ID=cds.g1768.t1;Parent=g1768.t1 #PROT g1768.t1 g1768 MMLHLSHDDSHVGCAHLVSYRQENADSFRQLVAYVVAIAAKTARGVVPSCNHCGDPSSRLHVCLECVTFSCFGAHLKHHFADKKHSLAMDVRRFAIFCNSCGDYVYDAECEKIACTAFRDARFTSVALANSNSSKSSGSNGSGANGLPVQRRRAQFVPWMPTAEDSEQIQTNGKRRRLNDSTGVGLRGLNNLGNTCFMNCILQSFVHNPPMRNFFLSDGHIRTTCTYVADGAAARNGGSDASTGTNGANGGHAANGHSDDKRFCMACEMDALFRKFYSGETTPHTPHEFLHTVWRNAHHLAGYEQQDAHEFLIATLNGMHTNCGDATYLRPMV* # ORIGINAL: g1772.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 17865 20610 . - . ID=g1772;Name=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 17865 20610 . - . ID=g1772.t1;Parent=g1772;Name=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 20005 20610 . - . ID=g1772.t1.exon1;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 20005 20610 . - 0 ID=cds.g1772.t1;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 18437 19899 . - . ID=g1772.t1.exon2;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 18437 19899 . - 0 ID=cds.g1772.t1;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 18192 18231 . - . ID=g1772.t1.exon3;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 18192 18231 . - 1 ID=cds.g1772.t1;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 17865 17993 . - . ID=g1772.t1.exon4;Parent=g1772.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 17865 17993 . - 0 ID=cds.g1772.t1;Parent=g1772.t1 #PROT g1772.t1 g1772 MDEPPAQDGGKPVAGVGSKDGDAGSMLPAIPACTSVFTHAIFDIGFRYVLEKEVGFGTYGMVSSGHDTVTKRKIAVKKISHIFDREVLTRRTLREIRLLRHFGGHANIIELRDVLMPHCALERGARIGPRGIPRFEDVYVVQDLMETDLQRLINSDQPLSNEHIRYFVYQILRGLKYIHSASVLHRDIKPGNLLLDANCNLKICDFGMARGAASTPEQQSGFMTAYVATRWYRAPEIMLSSGEYTYAVDVWSVGCIFAELLARRPLFAGRDYVHQLNLIVAVLGTPTEAFLDNILNERVRRYVRSLPKRTPVPLATLFPGADPLAVDLVSKMISFDPSQRINAETALAHPYLEKYHDVDDEPTCAPPKFNIDEPEGGDLRLAVALELGKQQRMELGLLKNATPLAVVQADDAKGTDAVLAGSDVKSTENVLGGDIGAVEGLDAHSNDVANEDAALGEKEAAAIAAFLDSGLLETHEEDDGANADEGNASGKRKREEGTLDESVEPPASASQSQVKSTGNAPEAPVKTDAANPAELPATKRAKTFTWATDEALLQRFREQYQRGSTDALNPVQKYAEHIARIYAERREAAKRLEQRRRPMMVGGVPFAPPPTKTGIGAIAARAAAVAARRRMESEAKEAGSGAGAGAGAGGGARAVFAGSLPPAFNPVLDIALVGELKRPSTQSAEIIDTIARDLRQTIDGGAAGGSLTANMSPLIPGIEMDELFAATDIDMKELQQDLEMGGVRL* # ORIGINAL: g1773.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 20913 21677 . - . ID=g1773;Name=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 20913 21677 . - . ID=g1773.t1;Parent=g1773;Name=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 21629 21677 . - . ID=g1773.t1.exon1;Parent=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 21629 21677 . - 0 ID=cds.g1773.t1;Parent=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 21407 21521 . - . ID=g1773.t1.exon2;Parent=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 21407 21521 . - 2 ID=cds.g1773.t1;Parent=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 20913 21300 . - . ID=g1773.t1.exon3;Parent=g1773.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 20913 21300 . - 1 ID=cds.g1773.t1;Parent=g1773.t1 #PROT g1773.t1 g1773 MASLRRRKAQAYSETEKLKVQLAAVEDGIATLDGQIHALTQHALEERTATKAPAKRKVRFDDDNPPSRKPGSRPAATNPYAVSTHTFAEDVPARDASKGSQQHRAHPSPHAHHTRPPSQPPTPNATQQRQVPQSKPAPIAAGISSTSNNFLQKTSCGAAVNGGGVRKDATVMDMFFNGGHRSH* # PASA_UPDATE: g1778.t1, single gene model update, valid-1, status:[pasa:asmbl_9387,status:3], valid-1 NODE_78_length_43841_cov_40.219 . gene 32320 35446 . - . ID=g1778;Name=g1778.t1 NODE_78_length_43841_cov_40.219 . mRNA 32320 35446 . - . ID=g1778.t1;Parent=g1778;Name=g1778.t1 NODE_78_length_43841_cov_40.219 . five_prime_UTR 35259 35446 . - . ID=g1778.t1.utr5p1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 35004 35446 . - . ID=g1778.t1.exon1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 35004 35258 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 34723 34855 . - . ID=g1778.t1.exon2;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 34723 34855 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 34411 34487 . - . ID=g1778.t1.exon3;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 34411 34487 . - 2 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 34171 34286 . - . ID=g1778.t1.exon4;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 34171 34286 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 33843 33948 . - . ID=g1778.t1.exon5;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 33843 33948 . - 1 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 33447 33572 . - . ID=g1778.t1.exon6;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 33447 33572 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 33035 33208 . - . ID=g1778.t1.exon7;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 33035 33208 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . exon 32320 32766 . - . ID=g1778.t1.exon8;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . CDS 32629 32766 . - 0 ID=cds.g1778.t1;Parent=g1778.t1 NODE_78_length_43841_cov_40.219 . three_prime_UTR 32320 32628 . - . ID=g1778.t1.utr3p1;Parent=g1778.t1 #PROT g1778.t1 g1778 MNILQQLKSSEAGTLQPGSRAQSASNLGPARTQSARTTTGQSGLFATGRIQHKYAFGENGSELFSVRFSPDSLFVAIGCGNGSVKVFNTQTGKLTFILDDKDEQMRLPATCLRWRPVMDGETKNHLLVSYATGKYRQWHATSNKCVSTITEDMNQGLSIDYRLDGRMFATGGIDLKVRVYNEQTKQVITEMYGGTGEISAGHSNRIFSLKFHPEEPETIVTSGWDGSVQIWDMRMGRSVRKVFGVNLCGDAMDINGTTILTGSWRKENALQMWDFRSGNHLVDIPWNKEPSEEPCLIYCAQFSKRDNGALIAAAGCKNNTLRLLDRKGQTYGSVRGFEKGLYSLDFSPDGTMLAVVGGDQILYVGDISPKVSAP* # ORIGINAL: g1769.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 10803 13389 . + . ID=g1769;Name=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 10803 13389 . + . ID=g1769.t1;Parent=g1769;Name=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 10803 11112 . + . ID=g1769.t1.exon1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 10803 11112 . + 0 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 11284 11374 . + . ID=g1769.t1.exon2;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 11284 11374 . + 2 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 11590 11656 . + . ID=g1769.t1.exon3;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 11590 11656 . + 1 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 12366 12475 . + . ID=g1769.t1.exon4;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 12366 12475 . + 0 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 12795 12912 . + . ID=g1769.t1.exon5;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 12795 12912 . + 1 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 13087 13151 . + . ID=g1769.t1.exon6;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 13087 13151 . + 0 ID=cds.g1769.t1;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 13338 13389 . + . ID=g1769.t1.exon7;Parent=g1769.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 13338 13389 . + 1 ID=cds.g1769.t1;Parent=g1769.t1 #PROT g1769.t1 g1769 MWVGVSGMRIVDVDVNVDVNVNVDVNVDVNVDVDVDVDVDVDVDVDVDVDVDVNVDVDVDVDVDVDVMRIVDVDVDVWAPPPPLAAQRLRMCMPTCQDALFPSASQRSADAGLGDSHSGGDDCPPNSLVNCLRRFTRPEKLGAREKINCGQCNSYQRFEHSKRSVKIQTLIEFPSRLDLTPYTTDYIVANRLGRAETAPPLGSNMYSLFAVVNHQGNMDTGHYTCYVRSLEQWYQCDDAWVTMASPRDVLSSEGYLLFYIRESLEYDASS* # PASA_UPDATE: g1776.t1, single gene model update, valid-1, status:[pasa:asmbl_9385,status:12], valid-1 NODE_78_length_43841_cov_40.219 . gene 24616 28274 . - . ID=g1776;Name=g1776.t1 NODE_78_length_43841_cov_40.219 . mRNA 24616 28274 . - . ID=g1776.t1;Parent=g1776;Name=g1776.t1 NODE_78_length_43841_cov_40.219 . exon 27493 28274 . - . ID=g1776.t1.exon1;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . CDS 27493 28274 . - 0 ID=cds.g1776.t1;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . exon 25535 27046 . - . ID=g1776.t1.exon2;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . CDS 25535 27046 . - 1 ID=cds.g1776.t1;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . exon 24616 25310 . - . ID=g1776.t1.exon3;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . CDS 24644 25310 . - 1 ID=cds.g1776.t1;Parent=g1776.t1 NODE_78_length_43841_cov_40.219 . three_prime_UTR 24616 24643 . - . ID=g1776.t1.utr3p1;Parent=g1776.t1 #PROT g1776.t1 g1776 MMRMPRPHTYDAHGFPVDVDGSQTHLVYSERAIHDSNGNFVTIVPYFKPRLFDPNRQFAISHAAFDKMMARIKSKQEQSSDGDSIPKSTWRQLRTIFVFILTVLVMIYGLFKAALFVWAVLAWICGGLFGTVDPTIAESGAVSSSASILLSISTLPSTPVPSIAGKARAAKSPSTTSSTSAAAKARSSQPPSRASTLSAKSTVAKATATPTPTTTVVSPSKVNAKKNVIELPAITKTPPRFEEEEELDDGYYDEDYYDDDDVCAEECYADDDDEYDPLDEELSYLDYLAERYGWNIDDADSDGYVADGARRATSDDAKHARGKAAGASQSKRSTVPTTPKAKAASNAPPVFEWKESKERPIIKNVEENKPQSMGFFEGVYWLVSSAVSAVVWVVALPLQFIWWGGSGLFLIVWSIASYLFAPFAWLLRTAFSVALSVFYLLAYDYPWAGLFVCFILFRRHRRRSASRLKNSFGTNSPLKDKGPKGTTPVATATEQEAPKESTATPNATRPSSSVPPEKQNVTAQPKKPQNRKQRQQHQQQQQQQQQQQQQQQQQTAKPTATSVAEPSSAPHTPATTSSKEKKEVKNDESVSNQPLSSRPPAQNAGSSKPSNSNTTATPSATASRAAGVEAPSPVIPASPTPAANSSGLQFNPSQLGDIAGIMKLFGGADRCDVYDEARGDTPIIAAAMAKNKLAVEGLLLVGASFDKTVKPAPLNALPVGSNALHAACLSGSNEVVEILLRYAVAHFPARSQALVFVTAKDADGRMPVDVAQKYGNTEMVSMINETKSNLEVLLSQDKSKKHGTPQPAFASKVPPASATAAGSSVQSSPSDSHATSPSMAPAASSGSIPASRIKVPNIKGKSGSRPVAAAEKPSDAAEEEELLAKIKESADALTRGNTTVRQPVDMRKLNQALALSREDFPPSKQFAVFLRIALMFVEAGDYMSAAETVINVARDKYGPPAFAIAATLFKLAGMDSKANVASLLSR* # ORIGINAL: g1770.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 13907 14821 . - . ID=g1770;Name=g1770.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 13907 14821 . - . ID=g1770.t1;Parent=g1770;Name=g1770.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 13907 14821 . - . ID=g1770.t1.exon1;Parent=g1770.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 13907 14821 . - 0 ID=cds.g1770.t1;Parent=g1770.t1 #PROT g1770.t1 g1770 MSSSTSLSDDPGHVPINCSIAPTIPRRRMAMPAHRSAFMSDDDSGDDESDGDPDLDDISDGTRAHRGIYRPSQVARLGSRRRTRSLEAPLKLCVPDDAMDATGDDALAPVIACATVSGNRSLPHSPISRKRKATSQSVELDELETLSLGGDGESDVASVWVNHSISGTNERIRDVLLVIFSVFGPIADFYNPIGLPYAYISFQNARDASTAVLVFAERTASDMQHLLMSVTPECVPVVMTEIANIASVVKTSERALLRAKRQRLGSDTDGPRSGAPTGFVTVKELSHMENMGRDISAFAIVSPS* # ORIGINAL: g1774.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 21779 22569 . - . ID=g1774;Name=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 21779 22569 . - . ID=g1774.t1;Parent=g1774;Name=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 22497 22569 . - . ID=g1774.t1.exon1;Parent=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 22497 22569 . - 0 ID=cds.g1774.t1;Parent=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 22197 22399 . - . ID=g1774.t1.exon2;Parent=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 22197 22399 . - 2 ID=cds.g1774.t1;Parent=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 21779 22030 . - . ID=g1774.t1.exon3;Parent=g1774.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 21779 22030 . - 0 ID=cds.g1774.t1;Parent=g1774.t1 #PROT g1774.t1 g1774 MEELLLRIQRSEEEFATLRAKVRQVDAEATEARDANEKIRQGIAEATENLNDQRDAHARMVETVDYYNGMGQIMSSQHAILIAEAQKMFAEMWLKFEAGCRSDMEACAHRLCELESSDAASARRVKAEKRMSKYEHLRTVEETLRAGELYDMHRLPVRSHSGNGFDGILNSHRPD* # ORIGINAL: g1781.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 42228 43821 . + . ID=g1781;Name=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 42228 43821 . + . ID=g1781.t1;Parent=g1781;Name=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 42228 42493 . + . ID=g1781.t1.exon1;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 42228 42493 . + 0 ID=cds.g1781.t1;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 42751 42964 . + . ID=g1781.t1.exon2;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 42751 42964 . + 1 ID=cds.g1781.t1;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 43182 43376 . + . ID=g1781.t1.exon3;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 43182 43376 . + 0 ID=cds.g1781.t1;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 43660 43821 . + . ID=g1781.t1.exon4;Parent=g1781.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 43660 43821 . + 0 ID=cds.g1781.t1;Parent=g1781.t1 #PROT g1781.t1 g1781 MASCPVVRFDAVVVGAGVMGSSTALHLARGGTKTALIEQYALGHGSGSSHGPSRITRHLYKQPHYTEMMFEAFRLWEELERESGERVYTKTGCLVVGPSRDSGVHDVADAARRYNVEHQRLTRDDLARRFPQFSFPDDYIGVYENDAGILNADKAVGVMQALFRKHGGEIRSEERVLAIVPGRLLSDPITVRTSKATYVCDKLVLTPGAWINPMLALVGISLNVQVLQIAVCYWKAQNAAEYAAERFPCVIDYSDDHTYALPALEYPGLVKVASSAFP* # ORIGINAL: g1771.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 15641 17584 . + . ID=g1771;Name=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 15641 17584 . + . ID=g1771.t1;Parent=g1771;Name=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 15641 16005 . + . ID=g1771.t1.exon1;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 15641 16005 . + 0 ID=cds.g1771.t1;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 16115 16178 . + . ID=g1771.t1.exon2;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 16115 16178 . + 1 ID=cds.g1771.t1;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 16365 17127 . + . ID=g1771.t1.exon3;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 16365 17127 . + 0 ID=cds.g1771.t1;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 17259 17584 . + . ID=g1771.t1.exon4;Parent=g1771.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 17259 17584 . + 2 ID=cds.g1771.t1;Parent=g1771.t1 #PROT g1771.t1 g1771 MSTSTLHTQSVAVAIAACVLVIGCASAAATQNRTDTAAPEAAASMYYVSASDFHLNPFYDPSIGKECACWNSLPHNACLPKNATRGPKPIAQYGCDGSTALVQETVRSMKRAMHRPDFVVLSGDYVFHDTQKWQNLKNATTFQVHEMMTKIIALVINEFRAGYPSAPILASLGNDDFFPDYAQPIDGQQRWLEAISEAFMPVLTQKGAAPDAIDTFRRGGYYRVDYAFKHPRSERDTDNVHTNADAAVVATNAITFLVINTVSYAVKNPFVNCSVRDPNAQFEWLLGELVNAKIEGRTVWIVGHIAPGMDHYSLTLDWADCYNTRYNDLLVNGNFLAPRGPVAAQLFGHEHADLVRMVGREKQPSIPLLLQASVSPIYNNNPAFRVYEYGRPDTNVQGGPVYPLDFSEHNMPLSQNANHYALMFPSAAREYNLTSIMPSQMWNFVNRLERGPNSSAEFSKYWANTVSLAPNPPACDPTCVKNEICSMRYIIKSEYDACTLLTASP* # ORIGINAL: g1766.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 558 4605 . + . ID=g1766;Name=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 558 4605 . + . ID=g1766.t1;Parent=g1766;Name=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 558 787 . + . ID=g1766.t1.exon1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 558 787 . + 0 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 1629 1671 . + . ID=g1766.t1.exon2;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 1629 1671 . + 1 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 1890 1979 . + . ID=g1766.t1.exon3;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 1890 1979 . + 0 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 2363 2497 . + . ID=g1766.t1.exon4;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 2363 2497 . + 0 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 2717 2874 . + . ID=g1766.t1.exon5;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 2717 2874 . + 0 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 3318 3630 . + . ID=g1766.t1.exon6;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 3318 3630 . + 1 ID=cds.g1766.t1;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 4078 4605 . + . ID=g1766.t1.exon7;Parent=g1766.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 4078 4605 . + 0 ID=cds.g1766.t1;Parent=g1766.t1 #PROT g1766.t1 g1766 MRLSTTAVTNLLPWLLPSAQFWIEILLVIPHPVPYLGATVDRFGSLFMLVRLYVLLRVVRDRSLIYRKRASIKRIPGEEQPELFGYPQSLYLSISCMLTGYPTDAFEKYQPLTVIGKGVCIAALIWGLFLFALLIDYVHRQMRPDSFEEKAVQWVQRTAVLEDERNECARLIQLVWRHHKWEQDFGSAYDPEDTKYRRISKIFESRFMHQSSRVREIRRRKADLGIRSDVPPHPPGHSNSNNGNNAGPSGAQTALGTLSALGSTAHLPDLAHARTSSLTASEAGPGPATLAAAIALHSGAAMDYAAVRDSAVGGSVATADLKGHVDAMLRQANEDILRHVSRLLDRQREAILGQITALHLAAVSATNERSSSHGKAADRGPSASTNPFAPLPSDSGVSLQRSASYGAGLSGGVSASASASASASANTGGKGSRSGRNGAGNGGAAASGVAKGSSAGVGVGVGAGDPMRSIVQQLQLRNMSRQPSQSDEDGENDTTQLL* # ORIGINAL: g1775.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 23023 24322 . - . ID=g1775;Name=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 23023 24322 . - . ID=g1775.t1;Parent=g1775;Name=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 24320 24322 . - . ID=g1775.t1.exon1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 24320 24322 . - 0 ID=cds.g1775.t1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 24154 24228 . - . ID=g1775.t1.exon2;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 24154 24228 . - 0 ID=cds.g1775.t1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 23895 23988 . - . ID=g1775.t1.exon3;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 23895 23988 . - 0 ID=cds.g1775.t1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 23659 23726 . - . ID=g1775.t1.exon4;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 23659 23726 . - 2 ID=cds.g1775.t1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 23402 23520 . - . ID=g1775.t1.exon5;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 23402 23520 . - 0 ID=cds.g1775.t1;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 23023 23146 . - . ID=g1775.t1.exon6;Parent=g1775.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 23023 23146 . - 1 ID=cds.g1775.t1;Parent=g1775.t1 #PROT g1775.t1 g1775 MSVTLHTDLGDLKIELFCDEAPRTCENFLALCASGYYDGCKFHRNIKNFIVQTGDPAGTGKGGNSIWGGKFEDEISDSLRHNARGIVSMANSGPNTNGSQFFITYAKQPHLDKHNTIFGKVIFGNDTLDFMEKVPVDEKNRPVNPIKIRNVTIHANPIAG* # PASA_UPDATE: g1767.t1, single gene model update, valid-1, status:[pasa:asmbl_9386,status:3], valid-1 NODE_78_length_43841_cov_40.219 . gene 5518 7594 . - . ID=g1767;Name=g1767.t1 NODE_78_length_43841_cov_40.219 . mRNA 5518 7594 . - . ID=g1767.t1;Parent=g1767;Name=g1767.t1 NODE_78_length_43841_cov_40.219 . five_prime_UTR 7319 7594 . - . ID=g1767.t1.utr5p1;Parent=g1767.t1 NODE_78_length_43841_cov_40.219 . exon 6870 7594 . - . ID=g1767.t1.exon1;Parent=g1767.t1 NODE_78_length_43841_cov_40.219 . CDS 6870 7318 . - 0 ID=cds.g1767.t1;Parent=g1767.t1 NODE_78_length_43841_cov_40.219 . exon 5518 6722 . - . ID=g1767.t1.exon2;Parent=g1767.t1 NODE_78_length_43841_cov_40.219 . CDS 6146 6722 . - 1 ID=cds.g1767.t1;Parent=g1767.t1 NODE_78_length_43841_cov_40.219 . three_prime_UTR 5518 6145 . - . ID=g1767.t1.utr3p1;Parent=g1767.t1 #PROT g1767.t1 g1767 MPPKQNVPDQPASRGSRASGKARGDYVPPRPADVIFVTSHLLDPTQAWIVLTEDICGIRAKEFLDAINFVPNLSEYAHRVPIGDLRLSDGVSPLTKDMLTTQKHKEKSHLSHVWVGNAVILVMGSLYRRKFNENLLHTPFFQSCVLEMNKVSFTDVWTGQASLDMDGVDAGGSGSMLGGGLHGIGSRGGDISMGSFSHDLALAHSAGLSGIPVGVSAAGSAQHGGQLDGSSMDGGSAGIHLGHAHAPSQSQGQGLGLGLSLGDSRATVQHQTAMVGLRQQQQQQQQHQQHQQHLLLMQQQQRAHANRPLDGGREASGALDASEHLSSAAAASQILQLTRSG* # ORIGINAL: g1777.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 29043 32139 . + . ID=g1777;Name=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 29043 32139 . + . ID=g1777.t1;Parent=g1777;Name=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 29043 29138 . + . ID=g1777.t1.exon1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 29043 29138 . + 0 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 29249 29512 . + . ID=g1777.t1.exon2;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 29249 29512 . + 0 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 29669 29714 . + . ID=g1777.t1.exon3;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 29669 29714 . + 0 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 29878 30027 . + . ID=g1777.t1.exon4;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 29878 30027 . + 2 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 30234 31030 . + . ID=g1777.t1.exon5;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 30234 31030 . + 2 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 31260 31338 . + . ID=g1777.t1.exon6;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 31260 31338 . + 0 ID=cds.g1777.t1;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 31616 32139 . + . ID=g1777.t1.exon7;Parent=g1777.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 31616 32139 . + 2 ID=cds.g1777.t1;Parent=g1777.t1 #PROT g1777.t1 g1777 MALQGPVWFESEYPIHCAVWDDDLEKLNDSLSLASIEAKDPRGRTPLHLAVTLGRSKCVHALLEAGADATARNAGHWTILKEAIATCDRGIVTDVLTYRNGRLEADLRERIPRLLNLLEESDDFYIEMNWEFTSWVPLVSRFCPSDTYRIWKKGACVRLDTTLIGFENMKWKRGNISFMFTRSEDGNDGIIFHIDHDDKTIVASKIAPSGEYAAPDEALLDKLMLHGGTSTDLDSTNVSFARAKSGIWGFQSDRTEKVEGWDSRVFSVDGLEFMKRVRLEHLPPTHPERTKPRGFVSNLLHHGGKGSPLCDDDEAKAAFEEDFASMDADANADTERKGEDGDSTDDDNDVFFDAEDGTSESDAVGSKSGRHAKGQQRVQHRKWKAPPIPAPRVSRSEYFSPRPSHDEAADPVVGRIPEVRRQAQKIKANMWMCDDFPLSLQRQITPIIDLMAPTNAHFAKLKNFIDLQLPSGFPVKIEIPLFRVLNARVTFSGFDPALIDASHFELPPNYRNIDATYNPTGDNEYDAMLRLAIERSLQHSNPGHVDRFGFGSVASSSEAAEEEMLQRAIEESLRTARGEPPSSVVQGHSLPPVTAVTPIAPDFLTANDMVAEEVAAALRASRLDESEREARARRQEEEELERVLQLSMEYK* # ORIGINAL: g1780.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 40149 41747 . - . ID=g1780;Name=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 40149 41747 . - . ID=g1780.t1;Parent=g1780;Name=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 41047 41747 . - . ID=g1780.t1.exon1;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 41047 41747 . - 0 ID=cds.g1780.t1;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 40734 40911 . - . ID=g1780.t1.exon2;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 40734 40911 . - 1 ID=cds.g1780.t1;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 40445 40481 . - . ID=g1780.t1.exon3;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 40445 40481 . - 0 ID=cds.g1780.t1;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 40149 40246 . - . ID=g1780.t1.exon4;Parent=g1780.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 40149 40246 . - 2 ID=cds.g1780.t1;Parent=g1780.t1 #PROT g1780.t1 g1780 MCDDGAVTGETVSKDAQSILRFRHNAQRDPTADELPAISSTPAECEHTHRDTSPTLQPSLQPSLQSSTGFDDGTAAISSADTLSCKGKAPESHCANSAPSAAEDDGGTPLSDEPAVVDHSAAAPSETTAATGEHASSGSGSSGSGAPLPSASAGEPSSGAAKDTGSGFECNICLETAEDAVVSYCGHLYCWPCLHNWLEYQGQRATCPVCKSAIGRDKVVPLYGRGKTNQRDPREKPLPQRPAGQRSENEYASRGPQFQMPFMGAQFAPNVAGAQAQFSFGFGMFPSLFGLQFTTFPMTGVFPNQARNLTPVEAQQAMLSRLLLMLGSFIIMLLLLY* # ORIGINAL: g1779.t1 original gene structure, not modified by PASA NODE_78_length_43841_cov_40.219 AUGUSTUS gene 35945 39427 . + . ID=g1779;Name=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS mRNA 35945 39427 . + . ID=g1779.t1;Parent=g1779;Name=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 35945 36068 . + . ID=g1779.t1.exon1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 35945 36068 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 36196 36401 . + . ID=g1779.t1.exon2;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 36196 36401 . + 2 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 36515 36680 . + . ID=g1779.t1.exon3;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 36515 36680 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 36768 36896 . + . ID=g1779.t1.exon4;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 36768 36896 . + 2 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 37022 37213 . + . ID=g1779.t1.exon5;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 37022 37213 . + 2 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 37369 37471 . + . ID=g1779.t1.exon6;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 37369 37471 . + 2 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 37598 37708 . + . ID=g1779.t1.exon7;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 37598 37708 . + 1 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 37857 37995 . + . ID=g1779.t1.exon8;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 37857 37995 . + 1 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 38106 38246 . + . ID=g1779.t1.exon9;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 38106 38246 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 38484 38564 . + . ID=g1779.t1.exon10;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 38484 38564 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 38769 38825 . + . ID=g1779.t1.exon11;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 38769 38825 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS exon 38969 39427 . + . ID=g1779.t1.exon12;Parent=g1779.t1 NODE_78_length_43841_cov_40.219 AUGUSTUS CDS 38969 39427 . + 0 ID=cds.g1779.t1;Parent=g1779.t1 #PROT g1779.t1 g1779 MPGETIASHADAHNQRWTVVGGPAKKGKALDTKLPQKIAPMNPIEQTETMFMAFRDSEDDAPKKPKKDVQSATNAAQKAKDAKQPTKTAKKVAPTPQAPPRIPLKNAVAAISGQDIARVFKDSQLHYENADPSLWLHAVAEHLEKLLAHTIPEAAVDSAFDEKTFGFPASALKRDAVDALNNVLKSVDAPRRIAVFGDIIKTVVSRRKAKTTSPGLELVAQALVRQDGSVVRSSLVLLQSQIAGCYSQPHVTSFIGWISAQISDSDHALAFKSWLQLFTPLLADSNAATVTREYAVSLLEYIIDLNRATKGRATASPSNPSPSELLAFIELASSSTSALATNPKLRPLQERIRKHVPYARTTAILPSTATAHFEELTKAATSSDKPFANEVLHAAVHCLTVDANASLKRLESAYPKNAAEVFALVSFLAANPPQAAKVAKGALSSFVGACTKINADLLDPARKHSKKDILPKSEISRLNEALKSLVSKSTSHRAQRTRRRGVFLPLLSLALLVLGAAIALTLFCPTSDCADKPCEAGTLCGELRRRGVVQLIDTKLTQAINAVDPHYRRAHAIVEEQSRPLRAWIETNAPEYVDSASHHGNVAWAFLSEKAILARDAAIDLAEKAKVALHSAKSA* # ORIGINAL: g2772.t1 original gene structure, not modified by PASA NODE_4732_length_1290_cov_105.923_potentialcontaminant AUGUSTUS gene 333 1217 . + . ID=g2772;Name=g2772.t1 NODE_4732_length_1290_cov_105.923_potentialcontaminant AUGUSTUS mRNA 333 1217 . + . ID=g2772.t1;Parent=g2772;Name=g2772.t1 NODE_4732_length_1290_cov_105.923_potentialcontaminant AUGUSTUS exon 333 1217 . + . ID=g2772.t1.exon1;Parent=g2772.t1 NODE_4732_length_1290_cov_105.923_potentialcontaminant AUGUSTUS CDS 333 1217 . + 0 ID=cds.g2772.t1;Parent=g2772.t1 #PROT g2772.t1 g2772 ADPKVANKKGMSETRAERPKFGGQVHERLTVFERRWALYEEGLRSPLNNRQRALGLTTVCDASIMARIQAVVSNLLAVSKGLTGGEVDNPVLVRVALWAEYGVVAHALEVRDAAERPSFAAQFDRVGAKTTELCLEWLEEMTATLAPTVAARLFVKNGFPHTVQGGEVIVDIKVDDDGSALRYRAWLAAIHDDRAAEYTRAMVHALGNPLVHMAYAAYHREYVRALADAYGALRHFVVTKFGRSPFGLYLLNKSWSSAAWKRQQFCSARREREACWTSFLVAGARRVLLRILPV* # PASA_UPDATE: g14160.t1, single gene model update, valid-1, status:[pasa:asmbl_6524,status:12], valid-1 NODE_3777_length_2779_cov_33.9589 . gene 371 2747 . - . ID=g14160;Name=g14160.t1 NODE_3777_length_2779_cov_33.9589 . mRNA 371 2747 . - . ID=g14160.t1;Parent=g14160;Name=g14160.t1 NODE_3777_length_2779_cov_33.9589 . five_prime_UTR 2684 2747 . - . ID=g14160.t1.utr5p1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 2671 2747 . - . ID=g14160.t1.exon1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 2671 2683 . - 0 ID=cds.g14160.t1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 2277 2492 . - . ID=g14160.t1.exon2;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 2277 2492 . - 2 ID=cds.g14160.t1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 1975 2144 . - . ID=g14160.t1.exon3;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 1975 2144 . - 2 ID=cds.g14160.t1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 1266 1772 . - . ID=g14160.t1.exon4;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 1266 1772 . - 0 ID=cds.g14160.t1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 822 1028 . - . ID=g14160.t1.exon5;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 822 1028 . - 0 ID=cds.g14160.t1;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . exon 371 532 . - . ID=g14160.t1.exon6;Parent=g14160.t1 NODE_3777_length_2779_cov_33.9589 . CDS 371 532 . - 0 ID=cds.g14160.t1;Parent=g14160.t1 #PROT g14160.t1 g14160 MKGPEYGEFLHCKGKKFTDFDEIRREIEAETDRVTGSNKNISPIPISLRVFSPNVLNLTLIDLPGLTKIAVGDQPKDIEFQIKEMLMQFITKPNCLILAVSPANSDLANSDALKLAKEVDPQGLRTIGVITKLDLMDAGTDAREILENKLLPLRRGYVGVVNRSQRDIEGKKDIRAALAAERQFFMNHPSYAHMADKMGTLYLQKVLNQQLTNHIRDTLPELKGKLQHQMNTLEKEVSEMKNMDADDPSLKTKVMLQLCQQFADDFFKRIDGSGDDISLSELSGGARISRIFHERFPFELVKMEYDERTLRKEISFAIRNIHGIRTGLFTPDMAFEAICKRLITQMKEPSLKCVELCTTELGSVIAQCSERLSLYPNLREEVESLSRNCLKDCHMLTNKQVEMLISLELAYMNTNHPEFIGFAK* # PASA_UPDATE: g1692.t1, single gene model update, valid-1, status:[pasa:asmbl_10172,status:12], valid-1 NODE_96_length_40774_cov_45.1356 . gene 103 5078 . - . ID=g1692;Name=g1692.t1 NODE_96_length_40774_cov_45.1356 . mRNA 103 5078 . - . ID=g1692.t1;Parent=g1692;Name=g1692.t1 NODE_96_length_40774_cov_45.1356 . exon 4141 5078 . - . ID=g1692.t1.exon1;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . CDS 4141 5078 . - 0 ID=cds.g1692.t1;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . exon 3729 3897 . - . ID=g1692.t1.exon2;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . CDS 3729 3897 . - 1 ID=cds.g1692.t1;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . exon 2932 3435 . - . ID=g1692.t1.exon3;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . CDS 2932 3435 . - 0 ID=cds.g1692.t1;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . exon 483 2651 . - . ID=g1692.t1.exon4;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . CDS 483 2651 . - 0 ID=cds.g1692.t1;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . exon 103 276 . - . ID=g1692.t1.exon5;Parent=g1692.t1 NODE_96_length_40774_cov_45.1356 . CDS 103 276 . - 0 ID=cds.g1692.t1;Parent=g1692.t1;3_prime_partial=true #PROT g1692.t1 g1692 MSSNCEEAPPRLMRRNSTTSGLALDEDDSDRCIPRPRLDPASTTVKRWDLVLAVSVFVTCIIVPYQAAFDAVSPGLWVVAYACDALYIAHMYLQCYRGYFKVGVLVMNPKKTRKRYLRGAFALDLASALPLDLLALAFGGVRWRALSLWRLNRLIRAVRIPPIFSRREKDLKSNVLLWRFSKLLLVVLVMLNWGACGWYALACPGGAGTECGTTHAHSWTVATTIANASSLPFPKWPMMHQYEAALYWSAATFTNAGYGDIVATNDDERWYSIAAMLVGCTAFGYLSGIIASTIANAQAHKMAFVLQLEAVRRYLDTHVEPKVAALVVSYYKYLWRRNRGEETNKLFGALPTSFRTEISLGMYTKFIDAIPLLRVTPMPFKRMLSLECRHMLYTAGVYVLRAGESKTDLYYIQRGELEALNANGTSIFRTLTAGNYFGADTFFSGGEGPPSTYSVRTRTNCEIFMLSKESLNKVAEHYPETKCEIAEGYASSDPSRPINERFGRQGRISANYTEAMAAVEKLRQMHEGGRIRSMSVTSSAPVEVETAAAVNVGVSMQVALIWENAIVVASLVAAFLFPYQAAFAHTSTVLYVLTYALDVMFIVDVIAQMTRADVALAGIQSAEMQRARQVKAVLSSGTVAVDLVASFPTDVFCLIASRGYSRLWLLSYLRLNRVLRFHDVTGFFTRMGRHLSLKWVWIRLLRFCIYIVLMAHVCACVFYIAACGGESGCKMPSWIDEEEGPIGRATIVQYVASLYWSVSTLTLTGLGDLHCVTAGEMAVGILTFLAATLIIGVSTGSITAHLANESLQSVKLRQKLRAIRRFMKEHDIDPELQAKTVQYYETQWQDAHVTDPRRLFDHLPQKIQGKVSKSLSRSASNASRRGSLTQSLRSPTSVDTQSNPLSSNPCSQVTSTERLPSEGQGPYGRSRLPSIQLHKFDIQEVAEEGDMSKMEGAAPKQRKPSVAVRTKQALAALLSRVPVSSPVGLRGWQLVVVAAAVVCSITIAFQAAFAPADMYGLLALNYALDALFVANLVIVARTSSLSRVKEDAHLDSDAYRESADSTGNRDSLSGIRPTKAFQQAVDIASCLPIEIFCLAAPASIRPVVLRYMQLNRLLRFGIVQRYFNRAAAQINSTTERMEIVHFAVSVAVFLNWAACLLLVIACDTRLDGECDSLSWVAAQNMEDASVGRKYVAALYYATSAVTCVGYGDFFAVTVGERIYLMLLMLGGVLMFGYIIGSIAAALATSGLQRSQYQAKISAVANYMKHAKVDAGIQYRVVRYYEYLWERTRGVDANSLFSELPTELQADLCYSVHADIVNK # ORIGINAL: g1693.t1 original gene structure, not modified by PASA NODE_96_length_40774_cov_45.1356 AUGUSTUS gene 7599 12510 . + . ID=g1693;Name=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS mRNA 7599 12510 . + . ID=g1693.t1;Parent=g1693;Name=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 7599 7607 . + . ID=g1693.t1.exon1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 7599 7607 . + 0 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 7781 7850 . + . ID=g1693.t1.exon2;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 7781 7850 . + 0 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 7995 8140 . + . ID=g1693.t1.exon3;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 7995 8140 . + 2 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 8258 8455 . + . ID=g1693.t1.exon4;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 8258 8455 . + 0 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 8645 9535 . + . ID=g1693.t1.exon5;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 8645 9535 . + 0 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 9789 10080 . + . ID=g1693.t1.exon6;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 9789 10080 . + 0 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 10261 10302 . + . ID=g1693.t1.exon7;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 10261 10302 . + 2 ID=cds.g1693.t1;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 10517 12510 . + . ID=g1693.t1.exon8;Parent=g1693.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 10517 12510 . + 2 ID=cds.g1693.t1;Parent=g1693.t1 #PROT g1693.t1 g1693 MAGIVLTPFSTITEGPNGIAPLRIHRGQQHILGNEPGSDILVPSACRVAIEVSEGFVFVEDLESPSGTWIQTAPNATGDGFRLKTRAKYQLLPGNVLRLGDVRYVVREGGAGDAGDADDASALHNGGGHSETHPADPASPSLLGDSEADADEFDAMDAIPEEAVEVANNLPGDLLRDEIAPAASQQAPRAPAPALANDADDATDLSDATDITEVGDSAPDVASVNAPRQDEHAIADATQVFQSPPASPILATHARPGAHVPPTAAAFESTQLYQSPPHHTDTVADDARMDATQGVDHLASRTPRGRVNFEATQIYHSPSPNNNEREGVVSRSASPAMFEATQVYSPPADAAAADAHGNAEATQVYRSPPNNDGRPRSTAPGRLSVGDSTLAYGFDTPLHVGQSAADATLEVDSRRVSMANDEATQVFEDALNSPTFPPMGRTARDHNGGIDREESIATDRRQISATDISAHPRVTSASGGSSEGSVAPPVVPSRPPAALDPLAMLFGGVTRSAPAAPLAAPLAPVVNPLAETAQPETAHGIASQRSVEEELNTQASIVPDSQSQHDPLPSANTAYVDEHSERAASQSQHVPTQHLSQHASDLALSAHAAEPLTGEQVASAHVTNAEGSDGDDSSDATDDGRGDSARDAAAAPLSPPAALTTEAVVPAVHDVPSTVQEVSATPVTTVEAVAADTARAADGAAALTEATESESAVDGTQSQHAKSGPSKRAVASRDGTPTAASAAESDSKRPSRKGRSVSETRDADAPQSQGGRSTRSASASAKSSSGRALSEDTVAMPTTEEVAVHAPQPGAVSDVAAASVDASDGPAVVAASQKSSSMAVRPSRKRGRRESGDGDGPANDISPEKREEEDGAVAQSQASVAVSEAAGGRPAKAARTQTARGRRAPPVEVSESAVEATTIAATPAAPAKSGRGARPSGVHVTSGTPAETAHDAAKTPARNSKRKAVADDDEGASSAATTTTNTATPKPKRAAVAKPLVAFTGFLDDKRTKIVERLGGTFTTALGEHDGERDRMHLVTEKVRRTVKFLSALCTCSNIVTLEWLDACAEAQHFVDAAPYALVDKESEAKFGFKLADSLRRAATKKLLDGVLVHVTKSVKPDPKEMAEIVRCAGGILLDVMPTVVRVKSGDVIVVSCEDDKKDCKKLIDAGAPVYSAELLLSGVLRQTLDLAAHRLHGDAPADVDEEKEGKGKGRRR* # PASA_UPDATE: g1697.t1, single gene model update, valid-1, status:[pasa:asmbl_10175,status:3], valid-1 NODE_96_length_40774_cov_45.1356 . gene 36763 38236 . - . ID=g1697;Name=g1697.t1 NODE_96_length_40774_cov_45.1356 . mRNA 36763 38236 . - . ID=g1697.t1;Parent=g1697;Name=g1697.t1 NODE_96_length_40774_cov_45.1356 . five_prime_UTR 38087 38236 . - . ID=g1697.t1.utr5p1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . exon 38042 38236 . - . ID=g1697.t1.exon1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . CDS 38042 38086 . - 0 ID=cds.g1697.t1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . exon 37751 37870 . - . ID=g1697.t1.exon2;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . CDS 37751 37870 . - 0 ID=cds.g1697.t1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . exon 37435 37624 . - . ID=g1697.t1.exon3;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . CDS 37435 37624 . - 0 ID=cds.g1697.t1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . exon 36763 37104 . - . ID=g1697.t1.exon4;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . CDS 36809 37104 . - 2 ID=cds.g1697.t1;Parent=g1697.t1 NODE_96_length_40774_cov_45.1356 . three_prime_UTR 36763 36808 . - . ID=g1697.t1.utr3p1;Parent=g1697.t1 #PROT g1697.t1 g1697 MASSQAGEVAFSLERVAGLFAASRLVNEDGSVEIDTHKFLEAYGELNRVFDLLGKGFSFVTSDVTDKISILRTHLEHDSASYVTIHRMIAHELQREDIRQKTKPASGSRTLLRLHRALEFIALFFQRIAESDPAYSIGNILSESYSETLAKHHPWMVRQAVNLATYAAPARKDLLTKLGLDESTAKVQLLLVVQHVTPLHLEVESLYTRHALHDLP* # PASA_UPDATE: g1694.t1, single gene model update, valid-1, status:[pasa:asmbl_10169,status:3], valid-1 NODE_96_length_40774_cov_45.1356 . gene 12945 15250 . + . ID=g1694;Name=g1694.t1 NODE_96_length_40774_cov_45.1356 . mRNA 12945 15250 . + . ID=g1694.t1;Parent=g1694;Name=g1694.t1 NODE_96_length_40774_cov_45.1356 . five_prime_UTR 12945 13299 . + . ID=g1694.t1.utr5p1;Parent=g1694.t1 NODE_96_length_40774_cov_45.1356 . exon 12945 15250 . + . ID=g1694.t1.exon1;Parent=g1694.t1 NODE_96_length_40774_cov_45.1356 . CDS 13300 15159 . + 0 ID=cds.g1694.t1;Parent=g1694.t1 NODE_96_length_40774_cov_45.1356 . three_prime_UTR 15160 15250 . + . ID=g1694.t1.utr3p1;Parent=g1694.t1 #PROT g1694.t1 g1694 MSDCQVSHGFVIVPMDVLGADITDALHQLDAETSVLEDGAIAGQRISRTAATHSRKASRSGIVGMVIDLCTGGNRGAIAEKSDGNCERDAHTPVSPLPALHRTDSAELHSCKSTELTESYRTANNSTGLSTDDSSTDDGGSGDVPDAWANNTSSAATSNASANTGTSSAVDVSVVKGGLAEWVRRQLTYEALDRNLAQLMRERFSTSAAMDSIDGIPPAPPLSGTWWSRRRLPPTPALSANGCPLCQCDFACAEELALHDETATHNSKLREMHAADDWTPAFSAYWQSRSYKFVCIICYDPKGDNDRANCSALCGCGVCKGCAKELFTHKIMEGVVRINCPGCNAAAEEWNVWAAVEDEAIKARYTSLKTDLEKNPHVKTCPRCHAVNRLPGKRADAQSGDGYSNGDADVPAQEAILVPSPQKRRAQSLVPPQENGAPHVEAGPRARSTSLFSLSRLKSEKGPDCRVLCHACDFEFCFTCQAPVHEGVSCRQYQKGEKAFHQWRRGHAQKCPSCKVVIERTTGCAHMICSVCKTDFCYDCGCRMMHLKFFGGHHDALSVFGCKRLLFPNMPAARMMTRGALLTLGSPVAVAGAAVAAGVAVAASPFVGAAFIAKKISRR* # ORIGINAL: g1695.t1 original gene structure, not modified by PASA NODE_96_length_40774_cov_45.1356 AUGUSTUS gene 15383 17650 . - . ID=g1695;Name=g1695.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS mRNA 15383 17650 . - . ID=g1695.t1;Parent=g1695;Name=g1695.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS exon 15383 17650 . - . ID=g1695.t1.exon1;Parent=g1695.t1 NODE_96_length_40774_cov_45.1356 AUGUSTUS CDS 15383 17650 . - 0 ID=cds.g1695.t1;Parent=g1695.t1 #PROT g1695.t1 g1695 MNVRALRLRLSGRTLKRLVLGIVAVGLTAAALAHIAVSPAFLPSNAQTSAPGLDFKKVDIDTPSPSTVDPPRQLSRVGMQGDEWDVEVSLKTDQAALEQESANARGVGRPLSTDGDEGHHQEELRPRAQREASQLAGIAEALAIASAGPPPHTEDTLRLLKALIIPNPTMRVAKVGTPFRDGRVESEKSRQVTDEMIVNDITIVVTYKEAVYAFRYALPALVAVVPRGTRIIAVCGGPCDSCREWVDAFASAAKESGIAPGIRVVHVDDFTSGGGARRIVAALVTTKYALFMNNDLFFAHPSTLRELYACAEWEDTSAAIYLPFIVEVRDGVMNGMHGGLTDLHFIQGSNGVTSLYVSVDDARRENLNSTLSKSVFEQVTAIEDHVFLVRDPQRTASVLFDSSASLAREQIDLMLNARYAGLRVVEVLGSWWALGLTGIASSGDMPFVAWRRSDYIASATIRYVRQKWNSYLEYSGFHVRFRANSMNELAWSVSAGDVPTAPCDALLLATSMISLIGFNTLDVAPEGGNITACRVLKPVYSPPGTPPRPSRYDPLAVSVAGAMWQEAYPLLSCTCKVTPYDGSHVTLRFAASLAVSDSLVFPNTFSDNDKRAAAVRKGLFGPVIVKNYAIPLHAANEENTFFPNITVVHVRGLPYEPKSKIVRASSVCWSRDDRATMDCIAWFRLDDRGAAEALSAVYLVQQTVGAQRIGVIMRTTAGRPLVVIDGRVDAFSVVKVVYRSAAAAKIAEAVVASFH* # PASA_UPDATE: g1696.t1, single gene model update, valid-1, status:[pasa:asmbl_10173,status:12], valid-1 NODE_96_length_40774_cov_45.1356 . gene 23767 35782 . - . ID=g1696;Name=g1696.t1 NODE_96_length_40774_cov_45.1356 . mRNA 23767 35782 . - . ID=g1696.t1;Parent=g1696;Name=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 35743 35782 . - . ID=g1696.t1.exon1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 35743 35782 . - 0 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 35205 35516 . - . ID=g1696.t1.exon2;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 35205 35516 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 34823 34974 . - . ID=g1696.t1.exon3;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 34823 34974 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 34280 34463 . - . ID=g1696.t1.exon4;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 34280 34463 . - 0 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 33384 33992 . - . ID=g1696.t1.exon5;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 33384 33992 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 32776 33108 . - . ID=g1696.t1.exon6;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 32776 33108 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 32289 32660 . - . ID=g1696.t1.exon7;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 32289 32660 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 31789 32061 . - . ID=g1696.t1.exon8;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 31789 32061 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 31243 31638 . - . ID=g1696.t1.exon9;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 31243 31638 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 30971 31109 . - . ID=g1696.t1.exon10;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 30971 31109 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 30530 30741 . - . ID=g1696.t1.exon11;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 30530 30741 . - 1 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 29814 30161 . - . ID=g1696.t1.exon12;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 29814 30161 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 29386 29599 . - . ID=g1696.t1.exon13;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 29386 29599 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 28996 29162 . - . ID=g1696.t1.exon14;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 28996 29162 . - 1 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 28489 28788 . - . ID=g1696.t1.exon15;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 28489 28788 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 27906 28325 . - . ID=g1696.t1.exon16;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 27906 28325 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 27388 27648 . - . ID=g1696.t1.exon17;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 27388 27648 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 26830 27174 . - . ID=g1696.t1.exon18;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 26830 27174 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 26284 26577 . - . ID=g1696.t1.exon19;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 26284 26577 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 25688 25984 . - . ID=g1696.t1.exon20;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 25688 25984 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 25275 25604 . - . ID=g1696.t1.exon21;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 25275 25604 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 24676 25017 . - . ID=g1696.t1.exon22;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 24676 25017 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . exon 23767 24291 . - . ID=g1696.t1.exon23;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . CDS 23942 24291 . - 2 ID=cds.g1696.t1;Parent=g1696.t1 NODE_96_length_40774_cov_45.1356 . three_prime_UTR 23767 23941 . - . ID=g1696.t1.utr3p1;Parent=g1696.t1 #PROT g1696.t1 g1696 MLLFDLPCYAEGVTCDSVRSGGADSPVTESGGRLISFTVGFTSPLASCAVEYSAPAIAASFATSTLSTTFNASNCTVVFPKTGMPPVIVTPEAWPFKLTAVFSGGTTCKYTVTVRRPRTALRASGWNFVSPGAAGAPVMFYNIPYNASMATSYDCLFFDDATHIVTGAVLPQYDDNTTSVVTCSLTNEIIAELPSPTDGTIAVRLRMRTSIPGDSTSVFDWFTASYQYTAIGSELILPRSVVQSADASTVFGLFYVPSGTFVRCNGLWDGRRRRASTSTTNTDQSYTEPTPILLPGTTSGNIATALQCSFSASSQTRLMAVGSGPTSIALNTGVLTNVPVCTAVGTVATATLDYSNGLSLSSPSFPTGKIRWCAVRFAGSYLHYLPGYTLANTVRCPVPFAEWYSGPRSPMSAAVVEFQGYARCLGSFVDVTVNAACASDSTVNFVLMRSVATKLAFLSNTSAVVVSPVAVVSARSLAMSAGSLGCTATDSAGGQYVFAGATYNGSLVYCGSATVSSKALASLAVGVYVGQSTGCRAAEIASTLSAVSCASAGNVALSIADPGNGSVPRPTGSAAATSVALSTLNTDSELAKADIRCLFRASPYGVVLNITADSITRTTNTSVRVTCVLPAAVLGSVSSDTFTITLYVAPHGDMACASEAISLNFYQAVKFISRSLVTGSDVVSLFAPLPLTSNYLCEVREEKRQAGGRTYLSSTATGSPAGPRACTMPSLRSMFPISVSIADPSSSSIDSFRTSIPSLCPALYTGGVMPTLTLFTPEGLLTDPIVIRGDILPSVAYTGKHFSIECVYGSPTAAVVTASLSSEVYTASVSSGSSTFASFTCTLGAAEAADVLAQSASLMFAVDVRIRVVYDATADPCYSRALSYRILDGTVAPPFAAIASVFSTLVLGIVSVTGAFVTRGDTNADLISCAFPCASGVCFYTPFSISQPFSVPVTTTVACLNSSPYKYTCANQKDIAAGFPSSGSYVAVVVMKNNVSRLCSAAYALMPAPTAPMPSDPFQGALSSSIPKAVAPGLPFTVTFAPFLASYSLVDYTATCVVGADKSTFYVPAFRTPGAPKTELSCVMPRIPSAATSVTIGVALLRRTSYASGPFPLVSSAQVAYVGGLCNSFDQIAAQAQLALPMADSVLITAEGMGLSHLRQRALLSAVWLAIGTDAGPRMRTATPCTTTDAQPQYGAIFRCQSRDLWRALTPSSKFFLVAGSTRGPSGYTYGVDTLAAASMCASSPIATAAGVGCAVNSASPLVPGSNFTIATFGLNDISAVSVGGISSSFAPVIDQFGPSGSAVALYKVTVPSAQGGGTWTTPQVIIGIAASMYTCATTPAPSDDFKIFLSASSCLVTPPTRSLSITPPRVSGVASAGQVISLGQLIIKAIAGAETIIPNRVSLLDTTTGRVAAEVSLTGTQRALTFPPVISFTDVEYGRRYTYAVDIPAAAGTVGATVLSRTAPPVDLKGGLINRDCYVTADGSWTIAAECPVTLSPSVTWVGNSAALSFNTGQPATVMGVTCLFDGLAVAGSMAGPTVTCAAPATTYPLALSLAFDYGLAAPYFACRSYSTIPDATTGALCTVLNYGVSLDVPVVLLEWSSAADASTLDGVYCRFIRFGIASVSMASVATYVTSRGASSAGAVIACPLPPDVLEIARREIASSQPPVSTSFGLDIARAGCPRDKLIGLAIVESATKAYFLRSLKATTDSVRGVFFVPLGYSVALNEGVVLTTADALDIPGVGSLYTTLRVPSGAGVTVSSSFQLSIGKDSRRGFKYLVSAAESASVEFVNSAADGCETASLAPLLEQSTTLSVVFKGSVSSAPKTAYKCVFGTGVTTTAALSGGSLRCRFPDRLAYRDINDDASVSVRLYATNLRMCLLGSGTVSLSKSSASVAGYLCDSHRVTSGPQYLFAGGTATLYGSWCRLGMATRLSLALTCVWRLPATASTVPTSASFDGVRVTCAVPASLGGSGTGSVDVAVVVNEADVPCVPVYTRLALASCGGVYPRGADVSLGLISPGSTVVLGRTADLLRYSGLAELAHDCVWTLSTSVTRFAAFSVDGYLTCPTPDGDSNGNTLHVLPAGQDVAVFNSQCGNTSAAYNWKPVFGDRLFMPTCPRFTVSAPAVTSDAGEFRVRFALPSAAAITAPGNRVLCAFTRSTTGTVLVVGTPGSAYVYCSLPRKFYPSSDVAVPWVVLTANLVLGPMAGLAAPCQPTNDAFTIGELYAGSC* # PASA_UPDATE: g1698.t1, single gene model update, valid-1, status:[pasa:asmbl_10170,status:12], valid-1 NODE_96_length_40774_cov_45.1356 . gene 38547 39601 . + . ID=g1698;Name=g1698.t1 NODE_96_length_40774_cov_45.1356 . mRNA 38547 39601 . + . ID=g1698.t1;Parent=g1698;Name=g1698.t1 NODE_96_length_40774_cov_45.1356 . five_prime_UTR 38547 38642 . + . ID=g1698.t1.utr5p1;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . exon 38547 38949 . + . ID=g1698.t1.exon1;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . CDS 38643 38949 . + 0 ID=cds.g1698.t1;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . exon 39434 39502 . + . ID=g1698.t1.exon2;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . CDS 39434 39502 . + 2 ID=cds.g1698.t1;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . exon 39588 39601 . + . ID=g1698.t1.exon3;Parent=g1698.t1 NODE_96_length_40774_cov_45.1356 . CDS 39588 39601 . + 2 ID=cds.g1698.t1;Parent=g1698.t1 #PROT g1698.t1 g1698 MEDERAAINQQIADVAESILKVEGKLEALEVELQKIEEALAQADHPETQPADKEKKHRRKKLRKKEKRLHNEKEHLLKEKEQLRTEKEQLRTEKIILRQLAGGLDKGKKRGASQSDNDAADSTTRVYAL* # ORIGINAL: g14107.t1 original gene structure, not modified by PASA NODE_1037_length_14502_cov_49.3006 AUGUSTUS gene 4489 8647 . + . ID=g14107;Name=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS mRNA 4489 8647 . + . ID=g14107.t1;Parent=g14107;Name=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 4489 4621 . + . ID=g14107.t1.exon1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 4489 4621 . + 0 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 4759 5112 . + . ID=g14107.t1.exon2;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 4759 5112 . + 2 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 5368 6017 . + . ID=g14107.t1.exon3;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 5368 6017 . + 2 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 6369 6616 . + . ID=g14107.t1.exon4;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 6369 6616 . + 0 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 6981 7297 . + . ID=g14107.t1.exon5;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 6981 7297 . + 1 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 7486 7580 . + . ID=g14107.t1.exon6;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 7486 7580 . + 2 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 7799 7887 . + . ID=g14107.t1.exon7;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 7799 7887 . + 0 ID=cds.g14107.t1;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 8056 8647 . + . ID=g14107.t1.exon8;Parent=g14107.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 8056 8647 . + 1 ID=cds.g14107.t1;Parent=g14107.t1 #PROT g14107.t1 g14107 MGSLLTKSDSVGGDDDDLLRPAKLKMAADRHMRVRPEMSPVRAREGNSMKMKLRRPTPGSAMCTPVAVKLRHGGGTLRQQQQELRKIQLLNDMQVDLSSPIVRERRRDQVANSHIRTPLAGESVEVFDTAPITRMNVPNDVVLENVIGISDKWRGEWNKAVQVPTDLPRPSAYVRKLPDGKTTKSVFKRPSAFIRSQEIEVCVVDSGTVEYDFEDEDADWLDHLKSIHSKDVATLTVETLEEMIDALEKESFGAMQRKVAHSLGVAVPALSAAKRVRSSSAAAAADASVSLTCALRRPSGEDELREFVRRGTLRDSFGVSMAVEEAVISHWVDKRRRNKWGALVRRFYQPSLSEKFLSMLPDREERMDTAMQLRRDLEKVRLILDLCIKRERLKRERTSALGDAISVALRACESQGADVSAAAAALGVMCGHVDKKSLAKALGSATTLKEKERVTATNKRKRLAESDEEENDSNRHNVVDGRSSRRAPGSAGTPLAKVRKTDAAHAEDKKKAPKTAVSATVETAQAHAREGGALVRRGVLSVSAVGVGGRLNQGGQVVAGTGQLGAQDLMSFFDACQWADIPVLAGYLAAGANPNALGMAKGMSEKFKWRPLNCAAFYGRMEVVQVLLSYGADPALADDKHGASSLAWACTGGYASIADLLADRYTTILIARDAKGNLPIDLVGKEERRLSQWKHLLRLTTEGLKHATVAKQHARDCYVGADGVSATMSDIPEVASTVKQKGKQSVGHGKKESNAGLTSSSTRTTLSVSASASSQSTGQKDLARAAMCGGRLRVSLSKGESEEREGEGESVRMLRTRHGAGKPGR* # ORIGINAL: g14105.t1 original gene structure, not modified by PASA NODE_1037_length_14502_cov_49.3006 AUGUSTUS gene 223 1081 . + . ID=g14105;Name=g14105.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS mRNA 223 1081 . + . ID=g14105.t1;Parent=g14105;Name=g14105.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 223 319 . + . ID=g14105.t1.exon1;Parent=g14105.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 223 319 . + 1 ID=cds.g14105.t1;Parent=g14105.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 494 1081 . + . ID=g14105.t1.exon2;Parent=g14105.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 494 1081 . + 0 ID=cds.g14105.t1;Parent=g14105.t1 #PROT g14105.t1 g14105 EITTELRQTRLESTEQIEKLKGEIHSLVQTCQLSAAQSKRAVDDAFAENARLKKEHREVVQMSIRRGMALQDKRQETDSMQAHLDNALRMLRDCRTLIAGGCHSESPEISMHVAATLAAIDDALATPLERSRQMALSGTLSAASSVGRVNVAASAQNLTVAGSPLSGGSPNHSRSSLLKIRSAEALSRGGDVGRSMGSLAPVPDGSPRGQRSPTSPRGSPRSPRMFD* # PASA_UPDATE: g14106.t1, single gene model update, valid-1, status:[pasa:asmbl_139,status:12], valid-1 NODE_1037_length_14502_cov_49.3006 . gene 1601 3417 . - . ID=g14106;Name=g14106.t1 NODE_1037_length_14502_cov_49.3006 . mRNA 1601 3417 . - . ID=g14106.t1;Parent=g14106;Name=g14106.t1 NODE_1037_length_14502_cov_49.3006 . exon 3326 3417 . - . ID=g14106.t1.exon1;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . CDS 3326 3417 . - 0 ID=cds.g14106.t1;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . exon 2684 2993 . - . ID=g14106.t1.exon2;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . CDS 2684 2993 . - 1 ID=cds.g14106.t1;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . exon 1601 2268 . - . ID=g14106.t1.exon3;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . CDS 1834 2268 . - 0 ID=cds.g14106.t1;Parent=g14106.t1 NODE_1037_length_14502_cov_49.3006 . three_prime_UTR 1601 1833 . - . ID=g14106.t1.utr3p1;Parent=g14106.t1 #PROT g14106.t1 g14106 MPHPDDDGPKVEITKLDGESVSLVISNTDLSMVNSIRRVCMAEVPTMAIDLVEIIENSSVLHDEFLSHRLGLVPLISDSIEDYNYTRDCECTEYCPRCAVVFTIEKRNDTNETMHVTSRDLRLHEDYKHSRVRALTVTENDANNTKADILLVKLARHQAVSLIAIAKKGIGKEHAKWNPTCSIAFEYDPDNALRHTTFPTPQEWPKSKFTAHKDANPLVVEEDEFEMNKDPERFYMTVETTGALPPATVVLAALGNLNRKLNDLMNQMTEETRPTAWM* # PASA_UPDATE: g14108.t1, single gene model update, valid-1, status:[pasa:asmbl_137,status:12],[pasa:asmbl_140,status:12], valid-1 NODE_1037_length_14502_cov_49.3006 . gene 10117 11990 . - . ID=g14108;Name=g14108.t1 NODE_1037_length_14502_cov_49.3006 . mRNA 10117 11990 . - . ID=g14108.t1;Parent=g14108;Name=g14108.t1 NODE_1037_length_14502_cov_49.3006 . five_prime_UTR 11942 11990 . - . ID=g14108.t1.utr5p1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . exon 11858 11990 . - . ID=g14108.t1.exon1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . CDS 11858 11941 . - 0 ID=cds.g14108.t1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . exon 11253 11532 . - . ID=g14108.t1.exon2;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . CDS 11253 11532 . - 0 ID=cds.g14108.t1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . exon 10991 11064 . - . ID=g14108.t1.exon3;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . CDS 10991 11064 . - 2 ID=cds.g14108.t1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . exon 10117 10730 . - . ID=g14108.t1.exon4;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . CDS 10635 10730 . - 0 ID=cds.g14108.t1;Parent=g14108.t1 NODE_1037_length_14502_cov_49.3006 . three_prime_UTR 10117 10634 . - . ID=g14108.t1.utr3p1;Parent=g14108.t1 #PROT g14108.t1 g14108 MKIPSLSSLPLAQLPSLSWLRGLCILQLITCVALVIASGATQLDLSGADSPWYYSLQIPVSIAVFIIIIKVENEQRRARWVLAYASVTMILGLISSFWFMVFSNDLEIAKQKCSDITFNLTSVECSDNKKKQVTHIARTAVYLFVQIMCIHPAVSYVIELWSNVVTAVGSTSPSRQQ* # ORIGINAL: g14109.t1 original gene structure, not modified by PASA NODE_1037_length_14502_cov_49.3006 AUGUSTUS gene 12660 13604 . + . ID=g14109;Name=g14109.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS mRNA 12660 13604 . + . ID=g14109.t1;Parent=g14109;Name=g14109.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 12660 12869 . + . ID=g14109.t1.exon1;Parent=g14109.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 12660 12869 . + 0 ID=cds.g14109.t1;Parent=g14109.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS exon 13356 13604 . + . ID=g14109.t1.exon2;Parent=g14109.t1 NODE_1037_length_14502_cov_49.3006 AUGUSTUS CDS 13356 13604 . + 0 ID=cds.g14109.t1;Parent=g14109.t1 #PROT g14109.t1 g14109 MTITLVDAERLIDNVISSWERKEEWKYSIKACESEEKKHHFEVMWSIPTRRKPIPRATATVYFTVDFEQSARHPTITFRLESQSLIHDAKTSVFREKWLHDVADNKALMLTRTSIGSTVPQQAILHEIPPTPAITDDSRFKQLRVHSLSRLH* # ORIGINAL: g5651.t1 original gene structure, not modified by PASA NODE_1428_length_11403_cov_47.1753 AUGUSTUS gene 7892 8362 . + . ID=g5651;Name=g5651.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS mRNA 7892 8362 . + . ID=g5651.t1;Parent=g5651;Name=g5651.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 7892 8362 . + . ID=g5651.t1.exon1;Parent=g5651.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 7892 8362 . + 0 ID=cds.g5651.t1;Parent=g5651.t1 #PROT g5651.t1 g5651 MDPNIFHADASAIESAHGDAAAGGVQYTGVDQQLHELSRFDGDGARGTAEVWDGRLQADADHPTHNQVQPDHLVQVDGTSAAHADGDHRRAIGDSFERLWRRLTPEQREQFGQTRWRNGPAFPTSQVPSGGSAAGSLVTGVSLQHAAPGLWGGADS* # ORIGINAL: g5649.t1 original gene structure, not modified by PASA NODE_1428_length_11403_cov_47.1753 AUGUSTUS gene 257 5599 . + . ID=g5649;Name=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS mRNA 257 5599 . + . ID=g5649.t1;Parent=g5649;Name=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 257 412 . + . ID=g5649.t1.exon1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 257 412 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 576 720 . + . ID=g5649.t1.exon2;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 576 720 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 835 918 . + . ID=g5649.t1.exon3;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 835 918 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 1090 1208 . + . ID=g5649.t1.exon4;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 1090 1208 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 1355 1544 . + . ID=g5649.t1.exon5;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 1355 1544 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 1865 1991 . + . ID=g5649.t1.exon6;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 1865 1991 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 2533 2633 . + . ID=g5649.t1.exon7;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 2533 2633 . + 0 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 2854 2912 . + . ID=g5649.t1.exon8;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 2854 2912 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 3117 3324 . + . ID=g5649.t1.exon9;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 3117 3324 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 3462 3518 . + . ID=g5649.t1.exon10;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 3462 3518 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 3706 3832 . + . ID=g5649.t1.exon11;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 3706 3832 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 4085 4143 . + . ID=g5649.t1.exon12;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 4085 4143 . + 0 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 4317 4435 . + . ID=g5649.t1.exon13;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 4317 4435 . + 1 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 4756 4989 . + . ID=g5649.t1.exon14;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 4756 4989 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 5133 5599 . + . ID=g5649.t1.exon15;Parent=g5649.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 5133 5599 . + 2 ID=cds.g5649.t1;Parent=g5649.t1 #PROT g5649.t1 g5649 PFEGGGDVVIEDCSSEFGFHLESPTILAALISDGYLCQVHGGGIVVVSVAHGHRVACRWLPPEGCAISVAAASEGGLVVLTLSPTNDVVVLTFAGGDIDRPSTLVVQSNFRMTSAVSTMEVIPVNPQRCDHDCTFVVIGTYSSTLETVRLQCVDGCMRATASFKLNLLSASTEGIGVPESTCYVHQLHDAPALYVGLRDGALVRFEWLWDAACSDVLSPVGEATLSRRLGLAPVRLSRVFRRDGVAVIALSDAPWTTVRLRNRPEVVPVTAGHYNRLAWHSSARMVIAAREDEDMPSANVDVIDCENGRVVTTIALNPGEQVTCISSWKLLGDELVCIGMRLGDRGRLRVYTLRRQSREGQTNDLFVDCSHSWALEEQSVTELSCPVSVIAACDGRGCLVASGLSLYTVHPSEKRGKLRGVRKMLARGTITAVTLAPECVAVADEVDGISTYRIVQLDAVHDGIHGQEWPLLQHLNTDKCRRNVVAMAWDASGRTVRAVDADGCFFTVTDTGRCTGGNLTAGCNHYIGSHATQLRSAVVSFQSPEPMCALMTEESAVLSTSLGELISVRHLDAASYAPLRLLEESLLRESEHDSAPGECGAVRRPLLFETPPSWLPGFDTAYYFNVVNGDIVSVFPELHPSMQLRILQSAETVRKEQASIAADRAEERRRQRRESARLQTAELQRAQGRLGVHVRVGGSDDGAHVEECPSLWAVLEGGGLLATPRTVGAMIEALNTATVLSTETPSAVK* # ORIGINAL: g5652.t1 original gene structure, not modified by PASA NODE_1428_length_11403_cov_47.1753 AUGUSTUS gene 8722 10652 . + . ID=g5652;Name=g5652.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS mRNA 8722 10652 . + . ID=g5652.t1;Parent=g5652;Name=g5652.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 8722 10146 . + . ID=g5652.t1.exon1;Parent=g5652.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 8722 10146 . + 0 ID=cds.g5652.t1;Parent=g5652.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 10425 10652 . + . ID=g5652.t1.exon2;Parent=g5652.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 10425 10652 . + 0 ID=cds.g5652.t1;Parent=g5652.t1 #PROT g5652.t1 g5652 MELPLHPTEYTNSSLAASVGEIANVLPLNADQCAIPPVGVNPEASASQRELAAAVRAAAARQAKQQQRLHALAQQNENGKNIRQLQLLHAMQLRGEPLPTNTDPRMVAALWQHQAALSRMAQKRAEEEARMELGMRPPLRPGEKEVLVLDDDDEDVGGAVDSGPNENDIECLEYTTRIVGVQYFMGTVTPGEGVILRREPRNMHDRNAIRVINTRGEQVGHIPTSNSVVLAPLCDSDTVRLEGFVSGVYRHNRDVYPVTVQVFCIPEHSAAVAHALRALPEEFSATFTTSQERRRREAYYQQQQQQAAAAAEWERLVGDGTSVEHAQAAFDSILMRPACERDFASMRQASAPDALVTQLLPYQRQGLAWMIDREHPLPAAAGRRVLFWEFDSVRRLYVNSVTKMASANPPEPVRGGLLSDDMGLGKTLQAISLMLVPPSGEGFADRPVTHDPSYGKATLIVCPVSVVGNWLTQIKAHVREGALSVYVYHGNDRMEDGDALRQHDIVLTTYATLGLEFKRHAGRASPLFSGKWLRCDLQPLIMWSVFVGMC* # ORIGINAL: g5650.t1 original gene structure, not modified by PASA NODE_1428_length_11403_cov_47.1753 AUGUSTUS gene 5826 6687 . - . ID=g5650;Name=g5650.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS mRNA 5826 6687 . - . ID=g5650.t1;Parent=g5650;Name=g5650.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 6451 6687 . - . ID=g5650.t1.exon1;Parent=g5650.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 6451 6687 . - 0 ID=cds.g5650.t1;Parent=g5650.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS exon 5826 6329 . - . ID=g5650.t1.exon2;Parent=g5650.t1 NODE_1428_length_11403_cov_47.1753 AUGUSTUS CDS 5826 6329 . - 0 ID=cds.g5650.t1;Parent=g5650.t1 #PROT g5650.t1 g5650 MRGLYRTEGVRSLWRGNSATIIRIMPYAAIQFMSHEQYKLLFRRMNKAHATETTVEKFTAGALAGFTATTTTYPLDLMRARLAVQVYSGKYRGSLFASFKDVIATEGVRSLFRGLHPTLAGIVPYAGTSFFTYETLKKEFLGATGGTTIERWLCGAVAGLVGQSATYPLDVIRRRMQTNGLLPTGPNPAYGGMWTTFMYIVRTEGVRRGLYKGLTMNWIKGPIAAGISFSVFDLLKDMSRSWKLSD* # PASA_UPDATE: g13776.t1, single gene model update, valid-1, status:[pasa:asmbl_2902,status:12], valid-1 NODE_1883_length_8738_cov_43.8765 . gene 1651 2593 . - . ID=g13776;Name=g13776.t1 NODE_1883_length_8738_cov_43.8765 . mRNA 1651 2593 . - . ID=g13776.t1;Parent=g13776;Name=g13776.t1 NODE_1883_length_8738_cov_43.8765 . five_prime_UTR 2534 2593 . - . ID=g13776.t1.utr5p1;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . exon 2444 2593 . - . ID=g13776.t1.exon1;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . CDS 2444 2533 . - 0 ID=cds.g13776.t1;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . exon 2207 2320 . - . ID=g13776.t1.exon2;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . CDS 2207 2320 . - 0 ID=cds.g13776.t1;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . exon 1651 2026 . - . ID=g13776.t1.exon3;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . CDS 2000 2026 . - 0 ID=cds.g13776.t1;Parent=g13776.t1 NODE_1883_length_8738_cov_43.8765 . three_prime_UTR 1651 1999 . - . ID=g13776.t1.utr3p1;Parent=g13776.t1 #PROT g13776.t1 g13776 MKRNLQRSLIRRKLKPHLDGMRLNHSVDLLIYLDYIMFMKRLAQEAQAEAVRWDDKALRGEHVDAVMEAVLRRMKG* # PASA_UPDATE: g13775.t1, single gene model update, valid-1, status:[pasa:asmbl_2904,status:12], valid-1 NODE_1883_length_8738_cov_43.8765 . gene 238 1202 . + . ID=g13775;Name=g13775.t1 NODE_1883_length_8738_cov_43.8765 . mRNA 238 1202 . + . ID=g13775.t1;Parent=g13775;Name=g13775.t1 NODE_1883_length_8738_cov_43.8765 . exon 238 385 . + . ID=g13775.t1.exon1;Parent=g13775.t1 NODE_1883_length_8738_cov_43.8765 . CDS 238 385 . + 0 ID=cds.g13775.t1;Parent=g13775.t1 NODE_1883_length_8738_cov_43.8765 . exon 716 1202 . + . ID=g13775.t1.exon2;Parent=g13775.t1 NODE_1883_length_8738_cov_43.8765 . CDS 716 774 . + 2 ID=cds.g13775.t1;Parent=g13775.t1 NODE_1883_length_8738_cov_43.8765 . three_prime_UTR 775 1202 . + . ID=g13775.t1.utr3p1;Parent=g13775.t1 #PROT g13775.t1 g13775 MKSVVHFYDQSVSFQSTYMVTQVDSNAFLVAIFGQKKSETDPTVVDFMNGFANTLRNVGVLSMLKIQQ* # PASA_UPDATE: g13777.t1, single gene model update, valid-1, status:[pasa:asmbl_2903,status:12], valid-1 NODE_1883_length_8738_cov_43.8765 . gene 2840 8570 . - . ID=g13777;Name=g13777.t1 NODE_1883_length_8738_cov_43.8765 . mRNA 2840 8570 . - . ID=g13777.t1;Parent=g13777;Name=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 6124 8570 . - . ID=g13777.t1.exon1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 6124 8570 . - 0 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 5746 5935 . - . ID=g13777.t1.exon2;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 5746 5935 . - 1 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 5220 5401 . - . ID=g13777.t1.exon3;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 5220 5401 . - 0 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 4612 5026 . - . ID=g13777.t1.exon4;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 4612 5026 . - 1 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 4097 4504 . - . ID=g13777.t1.exon5;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 4097 4504 . - 0 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 3720 3871 . - . ID=g13777.t1.exon6;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 3720 3871 . - 0 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 3334 3552 . - . ID=g13777.t1.exon7;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 3334 3552 . - 1 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . exon 2840 3079 . - . ID=g13777.t1.exon8;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . CDS 2929 3079 . - 1 ID=cds.g13777.t1;Parent=g13777.t1 NODE_1883_length_8738_cov_43.8765 . three_prime_UTR 2840 2928 . - . ID=g13777.t1.utr3p1;Parent=g13777.t1 #PROT g13777.t1 g13777 MLLAHFVFSASFAPHSVLVCAQEKDKSGKHIALFDDPEGLIELPRSVKGGVATWRRPSEYITDQTPIVVDPQRYDPSAWTSAAPLATLLGTSLAGTAAPFVVVQQPSVVLLHQFLTGEKAMEAAAAAAAAAPEGDAQGKSEGLDDIARIATGQNSSANSSELMRTIASQLSIILDGRLGVGTERFRPWELIYPRGKDGVPTYNAGGKYSVRLYWLGAWRRITIDDRMPFDSEGSILLPTSTATNELWVPILSKALLRLAALSYQDGPSEPEHGDFCVMHALTGSLPESIPMHATTAQKGDLWTVLCDAWRPIDSREDGGVGDDDDRSNSESRPDTPPNEEGIVTRQPSQSQAGAHRTSQGSAGQAHSARVQSGQTQPGRMSNANNVPSTTLRKQTSVSSVTAGPHSAGASKVVPGVSSATSGYQPIDVVDPDAIAYDRLVLATFAPFRPSFPTIGSPSISAIAALASGGAVQGGSGLASMSNQSGMIGPHGNVVTQSSLNLPQAPVTSLPHPAEVMWSRADHSHTALVYEMRTVSVSQAAATTLRTSADSDTDAPEPHTIKVDKVDLHLVWIVSPFTHWKGRLSYTDTVGWSPELETAVGLSREARLNRQKSLSALRDAGKSHAPFEFWMLFEDFLEHMRCLSFIHHPSSFDQSESVVYVHESIVTGADSSPNAASLAFRIPLLLHVESETPIEVLIGFTAFSGPKANAPAFGLGPPSGMLVVDKYNWQNSRSDAAVFKIKTNATRAAVLSVPAGTHVYRLSVMAPFGYWVNLCSRHAFTFGEEGYVLRERLGAFVSDYEGTHDEQAANGWFLLFQQAFNFSQPTFVRATLYSPLQFSGPRLDDAITSHSQLRIIDNDTLKEVPKVFLQPTPKLLEPNSRGYTFMGDGRCPQAIMPGRWRLRIISSPAPPIPLLPEIATKFSSLDFDGAYVHNKHSTLFRFTVRIDADHPVTIQLGTSQPSVYIKLQILDNNEEVASATGRSHALIPAFLFQSDPRADSRADADVAPPAKESSAKESSAKESSAKERETKESKEREREREREREKQASATTSMSALNLDTTNDGDSDSIISENIREYKPHKYIIQATIERKSWPIPGLVRSLSIWDNGQGGMGAVPMTPSKEGKEGLGASGGVGPDKKLSVSGAPSSERATGRARAKSAARAGSPFKVPDIPAYSENDLVWRLRIMSVVDTSKLDVKKDTEREDQIKAIKSAWETSQPGRAVKARTSREQYLAQLCEKDPAKLAEMSDEVSSADRGHGKHDTLDKYLRKSAQGHVPRVLCPAEERTRDEARALAVAQYKQERDAVKAQRDADRKFRNKFKESLIDVAELYVTDLADNRGQLNAARATCRQRLIEERDLKCPQPPPAPEVVEDDAATAKAKRKRFVSP* # ORIGINAL: g9496.t1 original gene structure, not modified by PASA NODE_3538_length_3243_cov_38.7652 AUGUSTUS gene 237 3147 . + . ID=g9496;Name=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS mRNA 237 3147 . + . ID=g9496.t1;Parent=g9496;Name=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS exon 237 303 . + . ID=g9496.t1.exon1;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS CDS 237 303 . + 0 ID=cds.g9496.t1;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS exon 534 637 . + . ID=g9496.t1.exon2;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS CDS 534 637 . + 2 ID=cds.g9496.t1;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS exon 828 917 . + . ID=g9496.t1.exon3;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS CDS 828 917 . + 0 ID=cds.g9496.t1;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS exon 1210 3147 . + . ID=g9496.t1.exon4;Parent=g9496.t1 NODE_3538_length_3243_cov_38.7652 AUGUSTUS CDS 1210 3147 . + 0 ID=cds.g9496.t1;Parent=g9496.t1 #PROT g9496.t1 g9496 MEYPDQDMSSHLVMRVHTFNKNDKYLDSNEKPLQTKIDLLVANGFVDGNAVRFEILESEVDARNRRASTTLPGATTEATPQKVASPEDRAMFALAIRAVICTPASTIRSSQSTSVTAAGSAASKKAKSRAGKKISIDKLRALSLRCAGKVNDLQDRLSKAGQDDCEAERERVYVAALSHYHTHFLCQKARQLILISDTTTDDFVAIFGTTLRNEIRRFDADLVDRRAAEGRTAQQKRAGTATSAPHPLPNMLGPDKDKYEGWLGDFSSMVVDVVGAGASAEETAATRGARRGTNNVSAGDSVLTPSGTLRLTALTRTQAEAVNLLRDAFGIADAEAAEVVTRERIAFESNATGLVVGVAQRRNRIDAHPFYNKHSLESAGYAAWKEAEAAQSRDLMRALWSAPRMPGRECQFKCTLKVTLLEVVGIRGGGVDCTRPMALALHGKKQHMTLPVDYADAEGAAPIVWPDATFDFEVKNPAGIIVIEVWDESKSAKLACLEAPAASFMEGIMNTVNGPSTEPIRRMRPLMSTLAADLAPQALFQVSCVVDSSVRAMGHVHLRGGEHTSWTDTFVAVHHLDGDPAGIVFKMFSLPRFFEDEEEDGNIVVGSSGSLSIKRTSSTGSHKRTASSTSSNKSGDRSRAASEVDQQRIRTISSTSTGSTADLASSLSSASLGASMSGSGGVLQKEGLLLSKKKQDSKRSSLNLSRSKWRQSYFLLRNTQVFLYKEKPVGVS* # ORIGINAL: g1166.t1 original gene structure, not modified by PASA NODE_3564_length_3194_cov_78.6601 AUGUSTUS gene 379 2108 . - . ID=g1166;Name=g1166.t1 NODE_3564_length_3194_cov_78.6601 AUGUSTUS mRNA 379 2108 . - . ID=g1166.t1;Parent=g1166;Name=g1166.t1 NODE_3564_length_3194_cov_78.6601 AUGUSTUS exon 1097 2108 . - . ID=g1166.t1.exon1;Parent=g1166.t1 NODE_3564_length_3194_cov_78.6601 AUGUSTUS CDS 1097 2108 . - 0 ID=cds.g1166.t1;Parent=g1166.t1 NODE_3564_length_3194_cov_78.6601 AUGUSTUS exon 379 760 . - . ID=g1166.t1.exon2;Parent=g1166.t1 NODE_3564_length_3194_cov_78.6601 AUGUSTUS CDS 379 760 . - 2 ID=cds.g1166.t1;Parent=g1166.t1 #PROT g1166.t1 g1166 MSLSDAVRVNTALSVSVGSSAKLSGASASPDQVSLSLRDTDMHMRRRDGADGMEMAATAAETSPSSSRFSDTTSQLSPATTAASSAVGAQQQQMHPSTAQTLPASSLSLTSASASVSAIGMRPVRRLSSQEAPAATGFSGEKTMAIPASHTLGSGAHHVSDAGPSSSASVSAVRVAKAGMSAGGSGGGLVTASKSEEETDFFPSENVSVGRHAMTVTGAEIAGAAGGKKIVSFRARRVSGSSTHDDSESVSRTQIDPPSKTTTSTSSRSTVTTKRSEYWTKLNNLKELFDQGFITVTEYKERKDQLIDELTGTTCSESMVSMGREERSSIKANKKKQPTTVIHRPPPDFRAIAEENAVKHIFDIAKARWTETPVRVKIEPEHFARGGLRRAYHMKDLAEGDDKVTYVVKISIDPLEDKDQYFQDVEMQMYCKLWADQFNECNPPKQVDFVKAWLLTLTDRPGRP # ORIGINAL: g826.t1 original gene structure, not modified by PASA NODE_3993_length_2386_cov_45.4111 AUGUSTUS gene 1 948 . - . ID=g826;Name=g826.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS mRNA 1 948 . - . ID=g826.t1;Parent=g826;Name=g826.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS exon 1 948 . - . ID=g826.t1.exon1;Parent=g826.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS CDS 1 948 . - 0 ID=cds.g826.t1;Parent=g826.t1 #PROT g826.t1 g826 MTRWLRGTNARAYVDDIATGSRNIVQHINDIMEVMTALRERNVFLCISKCQFFKSEVIVLGRQVSGRGVSIPTKAMQGVHDLAVPKSRDDVRSAYQALTWWARFVPNFAIIGAPISDLLKSERRFKWGPNQQASYDALKNAICMAMPVLPPDFKEPMVLTTDASRVGVGAVLYRTDGDERRVVACASAKWSETEANYRHTGELEALGIVWGVLKFETYLGGVCHPFIVETDHQPLVSLFGGVGKISSSVTKRRILRWAEILSQFRFTIRHVPGTSMGMTDTMSRLPSTYDHELLGRRPVIMATVVEAPLKGAHDSN # ORIGINAL: g827.t1 original gene structure, not modified by PASA NODE_3993_length_2386_cov_45.4111 AUGUSTUS gene 1034 2262 . - . ID=g827;Name=g827.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS mRNA 1034 2262 . - . ID=g827.t1;Parent=g827;Name=g827.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS exon 1464 2262 . - . ID=g827.t1.exon1;Parent=g827.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS CDS 1464 2262 . - 0 ID=cds.g827.t1;Parent=g827.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS exon 1034 1356 . - . ID=g827.t1.exon2;Parent=g827.t1 NODE_3993_length_2386_cov_45.4111 AUGUSTUS CDS 1034 1356 . - 2 ID=cds.g827.t1;Parent=g827.t1 #PROT g827.t1 g827 MATGAPSAEKGIANIVRRCFKCESPDHLLRDCPVAARGRSGAPFAMVMAAKHRKQTNKKTKGVRQDSDEDGTLGVWKNEGTVSVHGCERKGHVSVLFDSGAVTCAVSRAACRRFRLPIDDPTADDTAFQGIGKGLIRAVGRIAEGVSLRIGVHGVTQLEGVRVFEELPGDTDVLLGFNRLVQMGVLRVDMVASLEKVARRDVKFADIAGQALANAQDDPIGVDKAVLSVWLPEGECTTVSREDFKHLKAAGISDERIDEIISAINEQKRAALKAEIERAQRGGVIRRLSKEQVRRALYLTVPSLAPKPDKTFRMVVDYRNINPFIEIKMRTEIPHEEEFLSRLAENDVFSIMDAVKGYWQLRLRGVAAPHGVC* # ORIGINAL: g1240.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 13644 14829 . - . ID=g1240;Name=g1240.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 13644 14829 . - . ID=g1240.t1;Parent=g1240;Name=g1240.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 14026 14829 . - . ID=g1240.t1.exon1;Parent=g1240.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 14026 14829 . - 0 ID=cds.g1240.t1;Parent=g1240.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 13644 13841 . - . ID=g1240.t1.exon2;Parent=g1240.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 13644 13841 . - 0 ID=cds.g1240.t1;Parent=g1240.t1 #PROT g1240.t1 g1240 MEGIIKQNELIAVSIDTTVVSDEIQQPAESQAVESDEVQVVSDEIQQSAEPHVASDEVQQSAEPLVVSDEIQQPAESQVVGDEIKQSAEPLVVSDEVQQSAEPLVVSDEIQQPAESQVVSEEIQQSAGPHVASDEVQQLAEPLVVSDEVQQSVEPLVVSDEPQQSADDVTQEPVGPQAVSSEGITDQTATSETSNGDGASGGDKGKSKENDLSDEEETVDELELDTKAHEEFMRGKELFESDGDQNITLAVQHFLNAAEAGHTLAQLEAAYLGHPYAQYRAGYCYMSGCGTENNEPNFEAATVWFQKAADQGNAEAAGCLEFLKSESAAHHGV* # ORIGINAL: g1237.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 9990 10697 . + . ID=g1237;Name=g1237.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 9990 10697 . + . ID=g1237.t1;Parent=g1237;Name=g1237.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 9990 10697 . + . ID=g1237.t1.exon1;Parent=g1237.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 9990 10697 . + 0 ID=cds.g1237.t1;Parent=g1237.t1 #PROT g1237.t1 g1237 MGRKKDESEPDVDDFAEDYDLEAEGDLDDAEFLEDEEVVEDDGADDDAEDEESPVDGDDAVVVQAQEDEVGEGDIDADDAVDNDDSYEVSEYTDEESSEEEDENATEEEEDEQTAISKSINVGLQASITKACKETADVDWKIVTGRERFTNNILTKYEAVALISQRVEMEQFLNTKQSEAVAQLPVGNDKLTECIKEEIREKRFPLMLYRHDPMRNVTEQWDPNEMDWTVYFHWF* # ORIGINAL: g1241.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 15646 19218 . + . ID=g1241;Name=g1241.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 15646 19218 . + . ID=g1241.t1;Parent=g1241;Name=g1241.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 15646 19218 . + . ID=g1241.t1.exon1;Parent=g1241.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 15646 19218 . + 0 ID=cds.g1241.t1;Parent=g1241.t1 #PROT g1241.t1 g1241 MAATASLSDIVNAKYDLPTLHEQVLRRPTMYIGNTNIEPFDTFILNASGTALVHVSLGISKALINIVNEIIINAYDAAQLYPVTEIRVTVDKETGQISCFNNGKGLEIAIHNVAKCYVPEMLFGRLLSTSNGDDSIEKTVAGQNGLGSKVCNVMSTQFIVETCGIMDDKGNKATYVQAFANNMFTRNDPVITKMRKTTKEFTKITFIPDYSRFNLPNGKIDNDHYEIIRRRVYDIAACTNSKLKVYFNDQLVPVNTFKKFTELVARVNAPDGTVPTADDWAYEAFIHKGAAGDEIRWEVGVIYRPDQDEFRCISFVNGLCTGDGGTHVDYIKTQVVDHLLKLIKEKNKEADTIKTLRSMVQRKMLLVIQSVIVNPRFSTQTKEKLITKKDLFGSTCVIAEDSPLVKKLLRSGITKVMNEEIKQKSLLSLNTMNGAKKGRVYIDKLDDANEAGGRNSQMCSLILTEGDSAKALVVSGLSAVGRDYFGVFPLRGKPLNVRGATTTQIKNNKEIQNLLTILGLRFDMPDISLKQLRYGKILIMTDRDVDGSHIKGLLINLIHAFWPNLLKEKFIGEIRSPLIKAKHGQTTTLDFYTMSEYTEWAKTVPNLNLWKIKYYKGLGTSSAKEGKEIFANLQKNEGIYAHGVLEDGSQNVKATNDVIDLVFKKENAHLRKEWLKTYDPAANLDMLQMSTITFTDFINREMIQFSVEDNVRSIPNAIDGLKPSQRKVTFVMQGMKSGQEEKVAVVSGKVTTDAAYHHGEASANGTIVNLAQNYIGCGNNINILNPEGQFGTRHDGGAAAAARYIFVQRCSYLAGNDDRADFFSKIFHPEDNAVLEYVVDDGKKVEPQFFVPVVPLALINSQDGIGTGYSTSIPPHDPREVVANIRRKLDGQPMVPMTPWYRGFMGKIEKSGEKTFSVKGTYVWDAVTRTITVTELPVGLATEKYKSDLEEKVKAADTWIEDVLNKTVDDSIRIVIFVKPECVALIGEKIVAGTLDKELKLVSSISLNNMHAFDAEGRLRKFETALDILDYYFDQRILYYGKRWENIKKELECQLLKLKWRMLFIEKVLSDEIVLKNTPKKALVERLEQLGFPLVDGSYGYLMNQNLWTFTNEMVDELREKFGAKTEELAQHMNKTAVTMWKTDLDEFSKHYEAWFKYNPNEYSSDAVCNDKKKQPAKRKPAKRTPAAKK* # ORIGINAL: g1234.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 4731 5386 . - . ID=g1234;Name=g1234.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 4731 5386 . - . ID=g1234.t1;Parent=g1234;Name=g1234.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 5059 5386 . - . ID=g1234.t1.exon1;Parent=g1234.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 5059 5386 . - 0 ID=cds.g1234.t1;Parent=g1234.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 4731 4798 . - . ID=g1234.t1.exon2;Parent=g1234.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 4731 4798 . - 2 ID=cds.g1234.t1;Parent=g1234.t1 #PROT g1234.t1 g1234 MALIFSDTHLGCDGSLKSLSYILDDVCDDYPVEWVLIAGDLFDESVPPEQVYEEAANLFREFSRKHVNVKVIAIRGNHDGSGQTTGIDRLEAAGLLQIVNTVDGNPQMLSGFHCNNVLAKERGKAEICPFL* # ORIGINAL: g1232.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 1407 1853 . + . ID=g1232;Name=g1232.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 1407 1853 . + . ID=g1232.t1;Parent=g1232;Name=g1232.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 1407 1853 . + . ID=g1232.t1.exon1;Parent=g1232.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 1407 1853 . + 0 ID=cds.g1232.t1;Parent=g1232.t1 #PROT g1232.t1 g1232 MLVHNQMFESRSELLKLGYHKQLMRGVHVNKATGTVESAILCGKYVDSIDYQTITYSTGGGWDLRTNRPTKNQRMDHPYSKAFLKNMDTGATVRMFRGVHSTVCANFIGGSVPTKPGYQFMGEYLVESCNVSIVKKKRQIRFTLRRLV* # ORIGINAL: g1236.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 7526 8023 . + . ID=g1236;Name=g1236.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 7526 8023 . + . ID=g1236.t1;Parent=g1236;Name=g1236.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 7526 8023 . + . ID=g1236.t1.exon1;Parent=g1236.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 7526 8023 . + 0 ID=cds.g1236.t1;Parent=g1236.t1 #PROT g1236.t1 g1236 MFDFPPLKIQAALIAAGMTLTSADCAYAAKHDQVSKRDEASILKASMQFEETCAKWLGDLNIRFSTQEDILAKDPNAKATPDFVFDRGDHVFLNNQQVFWIDAKNFFGCGQVSFLVKHMRKQAAKYNATFGNGGFLFSLGFDQSLQTTLSDVTRLFSGVLHTPAP* # ORIGINAL: g1238.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 11024 11482 . - . ID=g1238;Name=g1238.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 11024 11482 . - . ID=g1238.t1;Parent=g1238;Name=g1238.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 11024 11482 . - . ID=g1238.t1.exon1;Parent=g1238.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 11024 11482 . - 0 ID=cds.g1238.t1;Parent=g1238.t1 #PROT g1238.t1 g1238 MQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG* # ORIGINAL: g1235.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 5460 6083 . - . ID=g1235;Name=g1235.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 5460 6083 . - . ID=g1235.t1;Parent=g1235;Name=g1235.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 5460 6083 . - . ID=g1235.t1.exon1;Parent=g1235.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 5460 6083 . - 0 ID=cds.g1235.t1;Parent=g1235.t1 #PROT g1235.t1 g1235 MSPTTPTPTTPTTPTSAVASLFEVIRLGHSSPYIGEKVTQMEHMLQSAHLALTDERPDDSLGCTRAELVVAALAHDIGHILPAADFMGMYGHARHEFIGQKYLEQLGFSSAVSELVGSHVDAKRYLSAFGNYADGLSNASRKTLQYQGGPMNPVECNAFESSKYFTAKVRLREYDDGAKRVDVQSIPNLEYYTLLCLTARTAAPPPC* # ORIGINAL: g1233.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 3519 4331 . + . ID=g1233;Name=g1233.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 3519 4331 . + . ID=g1233.t1;Parent=g1233;Name=g1233.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 3519 4331 . + . ID=g1233.t1.exon1;Parent=g1233.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 3519 4331 . + 0 ID=cds.g1233.t1;Parent=g1233.t1 #PROT g1233.t1 g1233 MDQIAQNAQLAHSMRQSSGLESKNEVNFEPAFKSSMFKLPMVYDEGANKLIKLKEEAVDNDGLTWTQVYDLKPGGSFERKAGFRPRTTVDRSTTVENGTTVESGTTVENGTTVESGTTVESGTTVENGTTVENGTIVENGTIVESGTIVESGTTVENGITVETGTTVETGITVESGTTVESGTTVERGTTVESGTTVEGGMAVEGTTVESGTTVEGGTAVESGTAVEIGGDPRNARMSLTITNPPSPGAIAKNSKQRIKKTKSCPPISFC* # ORIGINAL: g1231.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 508 1023 . - . ID=g1231;Name=g1231.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 508 1023 . - . ID=g1231.t1;Parent=g1231;Name=g1231.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 508 1023 . - . ID=g1231.t1.exon1;Parent=g1231.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 508 1023 . - 0 ID=cds.g1231.t1;Parent=g1231.t1 #PROT g1231.t1 g1231 MDSIVPIAIAGIFGYVLYTNFQSGIEQEDKKCLTDHARKMLKQFEEHYAHKVFADNRLFARRMNKMFRYVGKLACAIRDKNDKINLYASKSLKYVSTLQGMAHALNDVKLRSYYEKELSELQKYLLATPVQTRPVEETEVVNVTTPTAIYSATSAGYVSLHLQDSIAKDMS* # ORIGINAL: g1239.t1 original gene structure, not modified by PASA NODE_410_length_24377_cov_42.5948 AUGUSTUS gene 11785 12462 . + . ID=g1239;Name=g1239.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS mRNA 11785 12462 . + . ID=g1239.t1;Parent=g1239;Name=g1239.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS exon 11785 12462 . + . ID=g1239.t1.exon1;Parent=g1239.t1 NODE_410_length_24377_cov_42.5948 AUGUSTUS CDS 11785 12462 . + 0 ID=cds.g1239.t1;Parent=g1239.t1 #PROT g1239.t1 g1239 MTDGEGNRCIVCNCVTDLEKKKIVVVTRELFVHVCGAHVGTDEYYLTVTQQYDLWKVEWPKQKYAMISAAGEHHENAKPLLLTRLDRVTCLVQANEHRFRTVSFDKFMEDNKLLRRVHHRTICVIPRPPRLDDNLSVLEELKPGEKLNVDEGMLSIDAGGWFQALYRRAYGQSRDVTYEALSPFQTVAHYLDGERRQKFVSGVKALLETYASDVGYCEKLRALLA* # ORIGINAL: g3240.t1 original gene structure, not modified by PASA NODE_3654_length_3016_cov_37.814 AUGUSTUS gene 145 1099 . + . ID=g3240;Name=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS mRNA 145 1099 . + . ID=g3240.t1;Parent=g3240;Name=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS exon 145 282 . + . ID=g3240.t1.exon1;Parent=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS CDS 145 282 . + 0 ID=cds.g3240.t1;Parent=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS exon 558 617 . + . ID=g3240.t1.exon2;Parent=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS CDS 558 617 . + 0 ID=cds.g3240.t1;Parent=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS exon 929 1099 . + . ID=g3240.t1.exon3;Parent=g3240.t1 NODE_3654_length_3016_cov_37.814 AUGUSTUS CDS 929 1099 . + 0 ID=cds.g3240.t1;Parent=g3240.t1 #PROT g3240.t1 g3240 DYAAFLEFVVAYENLHHPHGVAYFMRILDIRGVGYLSAFDFHCFYRSLKKKLTILGLEQPPFDDVKNEIFDMVCPDDPLKITLADLMRSNRAQTVVTMLVDAEGFWSYENREALVQQQQQSS* # ORIGINAL: g11084.t1 original gene structure, not modified by PASA NODE_613_length_20207_cov_41.642 AUGUSTUS gene 9509 12761 . - . ID=g11084;Name=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS mRNA 9509 12761 . - . ID=g11084.t1;Parent=g11084;Name=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 12486 12761 . - . ID=g11084.t1.exon1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 12486 12761 . - 0 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 11646 12336 . - . ID=g11084.t1.exon2;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 11646 12336 . - 0 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 11335 11549 . - . ID=g11084.t1.exon3;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 11335 11549 . - 2 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 10997 11111 . - . ID=g11084.t1.exon4;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 10997 11111 . - 0 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 10709 10757 . - . ID=g11084.t1.exon5;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 10709 10757 . - 2 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 10303 10491 . - . ID=g11084.t1.exon6;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 10303 10491 . - 1 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 10008 10141 . - . ID=g11084.t1.exon7;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 10008 10141 . - 1 ID=cds.g11084.t1;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 9509 9879 . - . ID=g11084.t1.exon8;Parent=g11084.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 9509 9879 . - 2 ID=cds.g11084.t1;Parent=g11084.t1 #PROT g11084.t1 g11084 MYGYGCNTPCNCENGAACDASTGKCTCTFGWTGVICNVVVAPSVPKVNATTEWTQDGIGIRLRWSHDDVGPRAWNAWHYEIRRAGCIPKVYQVGDVLTFIDTNVVIGQGYAYFVQPFNSMNVSSPTAGQFLIERLEKAELPSPPYTVSSTPTLDPDNNQHPMIKFTWKEDTSSGPIIETLIFRDGRLIVKGRMATEYKDRDVVFGRTYKYEIVSVNQYGNSNATRFSETASIGPADSGTPTAGGASSSSNVAGPVAGGVVGAIVGAAGIVFAILFVRKRASRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSFVATKAAVKTFKVTALSSADEIRSARSAFMAEIDLMRTIPKHTNIIELVGVCTQSEPNCMVLEFAAHGDLRHFLSNGKASDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRPPNSIENGWKLSPKAQVIVKVADMGLSRDTGGSGDYYMAKTRRKLPVKWMSPESLQHRIFTHASDVWSFGVVMWEVFARGAKPYPGVENHDVLTYLSQNKRMDPPMDCPKQVNAAMESCWRKHAETRPQFSQIVVQLRRGMAVLCGAEGGGGRPSGRGSDGDIERDSTVFGQSGTYAVTVPEDTYAETPGEGGTLYTLDNAMFQQDSNSKPGHFST* # PASA_UPDATE: g11082.t1, single gene model update, valid-1, status:[pasa:asmbl_8487,status:12], valid-1 NODE_613_length_20207_cov_41.642 . gene 208 3468 . + . ID=g11082;Name=g11082.t1 NODE_613_length_20207_cov_41.642 . mRNA 208 3468 . + . ID=g11082.t1;Parent=g11082;Name=g11082.t1 NODE_613_length_20207_cov_41.642 . five_prime_UTR 208 209 . + . ID=g11082.t1.utr5p1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . exon 208 338 . + . ID=g11082.t1.exon1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 210 338 . + 0 ID=cds.g11082.t1;Parent=g11082.t1;5_prime_partial=true NODE_613_length_20207_cov_41.642 . exon 685 762 . + . ID=g11082.t1.exon2;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 685 762 . + 0 ID=cds.g11082.t1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . exon 1107 1226 . + . ID=g11082.t1.exon3;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 1107 1226 . + 0 ID=cds.g11082.t1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . exon 1505 1584 . + . ID=g11082.t1.exon4;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 1505 1584 . + 0 ID=cds.g11082.t1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . exon 2060 2186 . + . ID=g11082.t1.exon5;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 2060 2186 . + 1 ID=cds.g11082.t1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . exon 2576 3468 . + . ID=g11082.t1.exon6;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . CDS 2576 2713 . + 0 ID=cds.g11082.t1;Parent=g11082.t1 NODE_613_length_20207_cov_41.642 . three_prime_UTR 2714 3468 . + . ID=g11082.t1.utr3p1;Parent=g11082.t1 #PROT g11082.t1 g11082 TALPKLLTALCQGDPFKNLEQKQALAKQFADILHFVLTFDDLKMTNPAIQNDFSYYRRTLNRMKMNPNSIAMNNLAVKDELANKMSLFYAYPTPMLKCLSDATAKFVTDNKSIPIDNITNCLSSMSIVCQTMVENPEYSSRFQSQDTALFCLRVMVGVIILYDHVHPVGAFAKKSTIDMKGAINVLKDYRNPNNVENLLNALRYTTKHLNDEDTPKAIKQMLA* # PASA_UPDATE: g11083.t1, single gene model update, valid-1, status:[pasa:asmbl_8488,status:3], valid-1 NODE_613_length_20207_cov_41.642 . gene 3689 8748 . - . ID=g11083;Name=g11083.t1 NODE_613_length_20207_cov_41.642 . mRNA 3689 8748 . - . ID=g11083.t1;Parent=g11083;Name=g11083.t1 NODE_613_length_20207_cov_41.642 . five_prime_UTR 8530 8748 . - . ID=g11083.t1.utr5p1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 8437 8748 . - . ID=g11083.t1.exon1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 8437 8529 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 7958 8041 . - . ID=g11083.t1.exon2;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 7958 8041 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 7526 7598 . - . ID=g11083.t1.exon3;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 7526 7598 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 7143 7218 . - . ID=g11083.t1.exon4;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 7143 7218 . - 2 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 6663 6906 . - . ID=g11083.t1.exon5;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 6663 6906 . - 1 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 6250 6424 . - . ID=g11083.t1.exon6;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 6250 6424 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 5937 6057 . - . ID=g11083.t1.exon7;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 5937 6057 . - 2 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 5541 5625 . - . ID=g11083.t1.exon8;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 5541 5625 . - 1 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 5204 5257 . - . ID=g11083.t1.exon9;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 5204 5257 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 4941 5021 . - . ID=g11083.t1.exon10;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 4941 5021 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 4611 4718 . - . ID=g11083.t1.exon11;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 4611 4718 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 4257 4397 . - . ID=g11083.t1.exon12;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 4257 4397 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . exon 3689 4057 . - . ID=g11083.t1.exon13;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . CDS 3893 4057 . - 0 ID=cds.g11083.t1;Parent=g11083.t1 NODE_613_length_20207_cov_41.642 . three_prime_UTR 3689 3892 . - . ID=g11083.t1.utr3p1;Parent=g11083.t1 #PROT g11083.t1 g11083 MAGVGADAVTSALRDAAIVDHETRNENKRYTVYKLVLKTGSRSWCVSRRYNEFYTLNEKLKKQFPNEHLKLPGKRLIGDNFDPNFIQNRRNALQEYIKMILSNENISKSDILRDFLSENGSFDRVVDGDDSIAKEKDSKKTLEDASDGDHIDLGASEDKKSGVNDFALIKVIGKGSFGKVLVAKHKESGTVYAIKVLSKKAIKQRNEVRHIMAERNVLKQNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQREKRFAEPRARFYAAEITSAIEYLHRVDIVYRDLKPENILLDSDGHVVLTDFGLCKEGIQPGGTTSTFCGTPEYLAPEVLRKQQYGRPVDWWCLGAVLYEMLVGLPPFYSRDCHEMYNRILHDKLRFPPQVSENARSLLTGLLDRDPTKRIGSGPTDAEEIKSHLFFKDVDWAKLLRKEYTPPFNPGVSGQMDLKNFDPEFTNETVPGSILATNDLHVEVDMVDDSTFAGFTYTSADPYLTQ* # ORIGINAL: g11085.t1 original gene structure, not modified by PASA NODE_613_length_20207_cov_41.642 AUGUSTUS gene 14149 17690 . - . ID=g11085;Name=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS mRNA 14149 17690 . - . ID=g11085.t1;Parent=g11085;Name=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 17593 17690 . - . ID=g11085.t1.exon1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 17593 17690 . - 0 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 17196 17267 . - . ID=g11085.t1.exon2;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 17196 17267 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 16999 17070 . - . ID=g11085.t1.exon3;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 16999 17070 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 16815 16886 . - . ID=g11085.t1.exon4;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 16815 16886 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 16477 16548 . - . ID=g11085.t1.exon5;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 16477 16548 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 16088 16159 . - . ID=g11085.t1.exon6;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 16088 16159 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 15909 15980 . - . ID=g11085.t1.exon7;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 15909 15980 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 15726 15797 . - . ID=g11085.t1.exon8;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 15726 15797 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 15544 15615 . - . ID=g11085.t1.exon9;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 15544 15615 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 15162 15233 . - . ID=g11085.t1.exon10;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 15162 15233 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 14917 14988 . - . ID=g11085.t1.exon11;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 14917 14988 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 14554 14625 . - . ID=g11085.t1.exon12;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 14554 14625 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 14378 14449 . - . ID=g11085.t1.exon13;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 14378 14449 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS exon 14149 14224 . - . ID=g11085.t1.exon14;Parent=g11085.t1 NODE_613_length_20207_cov_41.642 AUGUSTUS CDS 14149 14224 . - 1 ID=cds.g11085.t1;Parent=g11085.t1 #PROT g11085.t1 g11085 MRGLLFTCRSWANKGITSIASGLFDGLTGLKKIYLYSNQIATFPTGIFDKLTALTTLYLQSNQIATLPSGIFDKLTALTGLDLSANQITTLPYAIFDKLTLLSTLYLYSNQIATLPVGIFDKLTALYSLQLNSNPIASLPIGIFDKLNALTNLNLMATQIATLPSGIFDKLTALTTLSLSTNQIVTLPSGIFDKLTALTYLSLSTNQIVTLPGGIFNNLTALSYLYLQSNQIAALPSEIFDKLSGLRTLQLNFNRIATLPSGIFDKFITLTTLYLHGNGIATLPSGIFSNLAALRVLQLNSNLIATLPSGIFDKLTALTALYLYSNQLATLPIGIFDKLTTLNTL* # ORIGINAL: g7960.t1 original gene structure, not modified by PASA NODE_1089_length_14045_cov_44.4465 AUGUSTUS gene 5875 6384 . - . ID=g7960;Name=g7960.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS mRNA 5875 6384 . - . ID=g7960.t1;Parent=g7960;Name=g7960.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 5875 6384 . - . ID=g7960.t1.exon1;Parent=g7960.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 5875 6384 . - 0 ID=cds.g7960.t1;Parent=g7960.t1 #PROT g7960.t1 g7960 MRALYEGEVVKLEADIRRLRAEVQDALALARTSQYDADVALTERDYWRQRALAAERGSLTPDTLDKTAQNDTHAAKDTLRSREFTRMRPVLSGGGGRMGSWAGLRGPQQSDFVLSALSNVGQSDGKPSPSLFEGKGDIVQRAMDVRRRLLDGAYDVGGHSVDVSNWRDR* # ORIGINAL: g7958.t1 original gene structure, not modified by PASA NODE_1089_length_14045_cov_44.4465 AUGUSTUS gene 691 3286 . - . ID=g7958;Name=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS mRNA 691 3286 . - . ID=g7958.t1;Parent=g7958;Name=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 3239 3286 . - . ID=g7958.t1.exon1;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 3239 3286 . - 0 ID=cds.g7958.t1;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 2480 3028 . - . ID=g7958.t1.exon2;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 2480 3028 . - 0 ID=cds.g7958.t1;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 2050 2244 . - . ID=g7958.t1.exon3;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 2050 2244 . - 0 ID=cds.g7958.t1;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 691 1503 . - . ID=g7958.t1.exon4;Parent=g7958.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 691 1503 . - 0 ID=cds.g7958.t1;Parent=g7958.t1 #PROT g7958.t1 g7958 MSVKTEIKDEPLDYYDYTAQDVKPFHQDQLPPRVHNHVSELNGTPSHNELPFDDIRRRREWARDRSEEKYDDNGIRRRDECDRDGYRDYSGRDGGRPRGHREGEEYRRRESRNSYSLQRRARSPSPRERRGKRDARDNYGNYGDSYGRDGRGNSPLSGSGVPASTEPVGVLQGLRLGCLGMESDGSDEDPLPVQTTGEKIVERAPTQPTMGLPQLLHVAATPTVVRMPSETSIPRDDPWNRRVTVTVPVVEQGRRAFTKADILKTLETQLAITEPVQLKRDFRTVGHFFGEFTSDDAAARALKERQFRVDGGWIHIEKADRRFHSYGFATPQEWKERQRNREYQQARNNLAHSQVVDLINAVEHRTSVIKNQNAIISSQSAAISDLQGKVAEARRAEERVAELKRDVVRLKESLDKKRNEVDTMSAHLLETKRLLREAERDINNRGLESEQLAMDAARAKASVAVSELLERHRIGILTALNADKLANKFGDADGLRGQFPLSDGVSGMLGARSLPVLVVVVAFLVAVAVAAVVG* # ORIGINAL: g7961.t1 original gene structure, not modified by PASA NODE_1089_length_14045_cov_44.4465 AUGUSTUS gene 12537 14045 . + . ID=g7961;Name=g7961.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS mRNA 12537 14045 . + . ID=g7961.t1;Parent=g7961;Name=g7961.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 12537 12806 . + . ID=g7961.t1.exon1;Parent=g7961.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 12537 12806 . + 0 ID=cds.g7961.t1;Parent=g7961.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS exon 12987 14045 . + . ID=g7961.t1.exon2;Parent=g7961.t1 NODE_1089_length_14045_cov_44.4465 AUGUSTUS CDS 12987 14045 . + 0 ID=cds.g7961.t1;Parent=g7961.t1 #PROT g7961.t1 g7961 MASSVAPMPEEGGSKFTVVQRESAGWKVLAVLAFCVAVPALIIAVYTYENPPKLSDAVAGSFEVSTVNGSKVVSLALGDADAPFALKGQKDQPLKLDKANVSLVTFDSSGTQFNTPTSFAGDLSVNTPASRRRAASEVFSVDVKTGNTAVGGNLTLGENLRMVGDFNVNSGKFAVTASTGKTEIAGDVAVATDKFTIASASGNTVIAGTAAIAGNVAVNMDKFKVTASNGKTEIAGDVVVAADKFTVASASGNTAIKGDVAVNTDKFTVASVSGNTAIKGDVAVNTDKFKVTASNGKTEIAGDVVVAADKFTVASASGNTAIKGDVAVNTDKFTVASASGNTAIKGDVAINTDKFKVTASNGKTEIAGDVLVASDKFTIASASGNTAIKGDVAVNTDKFKITAADGKTEIAGDVLVAADKFTIASASGNTAIKGDVAVNTDKF # PASA_UPDATE: g7959.t1, single gene model update, valid-1, status:[pasa:asmbl_331,status:12], valid-1 NODE_1089_length_14045_cov_44.4465 . gene 3731 5201 . + . ID=g7959;Name=g7959.t1 NODE_1089_length_14045_cov_44.4465 . mRNA 3731 5201 . + . ID=g7959.t1;Parent=g7959;Name=g7959.t1 NODE_1089_length_14045_cov_44.4465 . five_prime_UTR 3731 3772 . + . ID=g7959.t1.utr5p1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . exon 3731 3811 . + . ID=g7959.t1.exon1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . CDS 3773 3811 . + 0 ID=cds.g7959.t1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . exon 4053 4191 . + . ID=g7959.t1.exon2;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . CDS 4053 4191 . + 0 ID=cds.g7959.t1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . exon 4460 4530 . + . ID=g7959.t1.exon3;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . CDS 4460 4530 . + 2 ID=cds.g7959.t1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . exon 5072 5201 . + . ID=g7959.t1.exon4;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . CDS 5072 5158 . + 0 ID=cds.g7959.t1;Parent=g7959.t1 NODE_1089_length_14045_cov_44.4465 . three_prime_UTR 5159 5201 . + . ID=g7959.t1.utr3p1;Parent=g7959.t1 #PROT g7959.t1 g7959 MCKECVKQPFPERGSTCLEAGAYLVNFVGCKSCGGYDFPSVINKEAEEDEDGEETVTFDHSCKDCGHFVAKHVYTFRVEGKYQEYAMECMLCGNGEQSVSILPIDPAKRAG* # PASA_UPDATE: g6579.t1, single gene model update, valid-1, status:[pasa:asmbl_343,status:12], valid-1 NODE_1092_length_14037_cov_42.8692 . gene 12174 13178 . + . ID=g6579;Name=g6579.t1 NODE_1092_length_14037_cov_42.8692 . mRNA 12174 13178 . + . ID=g6579.t1;Parent=g6579;Name=g6579.t1 NODE_1092_length_14037_cov_42.8692 . five_prime_UTR 12174 12330 . + . ID=g6579.t1.utr5p1;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . exon 12174 12498 . + . ID=g6579.t1.exon1;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . CDS 12331 12498 . + 0 ID=cds.g6579.t1;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . exon 12627 12764 . + . ID=g6579.t1.exon2;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . CDS 12627 12764 . + 0 ID=cds.g6579.t1;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . exon 12859 13019 . + . ID=g6579.t1.exon3;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . CDS 12859 13019 . + 0 ID=cds.g6579.t1;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . exon 13130 13178 . + . ID=g6579.t1.exon4;Parent=g6579.t1 NODE_1092_length_14037_cov_42.8692 . CDS 13130 13178 . + 1 ID=cds.g6579.t1;Parent=g6579.t1 #PROT g6579.t1 g6579 MDSTDGAGPSSHSFNEENVWLREESAHESAFAANSGKSDNIGSDHVGQGTEPSVATVDEPLAPLPILLPLEPQLLAQLEEDAKKVSANIDYMLESLKINLHAVTGLSLGCENAYGLSVEGASSVVDDANKSLASLIVHARELDSLMGPIEKMAHQVQSLKKTLDVFEQIVK* # PASA_UPDATE: g6577.t1, single gene model update, valid-1, status:[pasa:asmbl_342,status:12], valid-1 NODE_1092_length_14037_cov_42.8692 . gene 314 5049 . - . ID=g6577;Name=g6577.t1 NODE_1092_length_14037_cov_42.8692 . mRNA 314 5049 . - . ID=g6577.t1;Parent=g6577;Name=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 4833 5049 . - . ID=g6577.t1.exon1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 4833 5049 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 4163 4660 . - . ID=g6577.t1.exon2;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 4163 4660 . - 2 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 3884 4068 . - . ID=g6577.t1.exon3;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 3884 4068 . - 2 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 3624 3692 . - . ID=g6577.t1.exon4;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 3624 3692 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 3334 3450 . - . ID=g6577.t1.exon5;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 3334 3450 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 2936 3058 . - . ID=g6577.t1.exon6;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 2936 3058 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 2729 2796 . - . ID=g6577.t1.exon7;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 2729 2796 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 2419 2554 . - . ID=g6577.t1.exon8;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 2419 2554 . - 1 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 1717 1851 . - . ID=g6577.t1.exon9;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 1717 1851 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 1389 1533 . - . ID=g6577.t1.exon10;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 1389 1533 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 1025 1098 . - . ID=g6577.t1.exon11;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 1025 1098 . - 2 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 718 884 . - . ID=g6577.t1.exon12;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 718 884 . - 0 ID=cds.g6577.t1;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . exon 314 526 . - . ID=g6577.t1.exon13;Parent=g6577.t1 NODE_1092_length_14037_cov_42.8692 . CDS 314 526 . - 1 ID=cds.g6577.t1;Parent=g6577.t1;3_prime_partial=true #PROT g6577.t1 g6577 MSATTHAASGDGGGAFVPCAGPADRHQLAALLVRAWRQRWTPAEWCVAARELVGHARPHPHDVEQAGGDLVCDVLLGQLLVGAHPCELLLAYLRHAVLTCTVSPAQFVAALEGNVTVDRPAHFVRVLAILSELFPALWASATAAALDAESEAVAGSGDHFFAEGTKRSHSGPSAHPLACALLALRACAWLIDRLAECVQMHFADGGEYLASETVRLLIEALRSQRVAALCGVAAEESHALRMRFANAVSCLRAAAAVNPVASEIIAPLWPVVSAVMRSGRGVPPSEAAVHPSLGELVHKEVMRSTAESLDAIGLEWLQFLRGMGMLPRKFFRDVTRDALAGMAQAAGRAPLQARWKRFFLVKLPALFSLLRPLLAVSGKNECASGADGTETEAVWTSPVHSSDLELAIEDVRRYSVPAKSLDVAYGCAVLDVFREALGSLHLLPSQPPAPPESVRDVTGWAVVGDIPRNREECNALRAVLSTADTALLEAWVTRFVELAADWNPLCHRQLAALAIEGLVTLSAREQVSRILPALLSSSFMDAVHAAGETSGLYACITAVNDASAGAVASGAFDGSFLVLLALATRHNPQAAPNSASVFGGWLRAVHRGDVGHVGNDNDDTVDDGALLRAAFVGDCDPDAVGRVLSNLPGHRLLAVASRCVLSALSACDATRISFERLCVGLSAIAAASPASGACMAAVLCKDAARGAGEWSQAAL # PASA_UPDATE: g6578.t1, single gene model update, valid-1, status:[pasa:asmbl_341,status:12], valid-1 NODE_1092_length_14037_cov_42.8692 . gene 5988 12064 . + . ID=g6578;Name=g6578.t1 NODE_1092_length_14037_cov_42.8692 . mRNA 5988 12064 . + . ID=g6578.t1;Parent=g6578;Name=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 5988 6036 . + . ID=g6578.t1.exon1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 5988 6036 . + 0 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 6303 6405 . + . ID=g6578.t1.exon2;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 6303 6405 . + 2 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 6599 6718 . + . ID=g6578.t1.exon3;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 6599 6718 . + 1 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 6905 7401 . + . ID=g6578.t1.exon4;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 6905 7401 . + 1 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 7689 7793 . + . ID=g6578.t1.exon5;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 7689 7793 . + 2 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 8134 8561 . + . ID=g6578.t1.exon6;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 8134 8561 . + 2 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 8748 10404 . + . ID=g6578.t1.exon7;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 8748 10404 . + 0 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . exon 10559 12064 . + . ID=g6578.t1.exon8;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . CDS 10559 11967 . + 2 ID=cds.g6578.t1;Parent=g6578.t1 NODE_1092_length_14037_cov_42.8692 . three_prime_UTR 11968 12064 . + . ID=g6578.t1.utr3p1;Parent=g6578.t1 #PROT g6578.t1 g6578 MFLDWVVQLGLLKHDPDLNVLAAFPLSVRRGVVSLVVEYLCGTKDLSFLTSAVHLQWVMEVIGQGLALPIEDADLTSKCIELYNNWLQGIWFPNSSVPPAIYDNPQLYFRRIMGHYSLLFAARRGDVARHAELCQRTLDIAQLVYRAWAPYMTAESWAALLRLLLGITDSVIVTVPAQRGDLADSLCGSLVAVLFDAWLHACVAHFPSQALWASLRTLCAKWRHRMPLVTTWNATLLGLTERMMNILHGPKFGPPLVTVSGVSGTKGLYSSGIAMPDDCVLQCWQRMLHIIVNPNLIMDAEIYLTAMQGVSRLVDTLLYVEKRSPPDIQDEAAAAPVMPALSAAHSRDQLVSLPSAGAVPSSVPAGNHPGHSQKYDAQQQQDHALPSSQRAPSGNSVLHVFGAWLFEAVSRPSGYEEGKAEAYYALCRIFSSQQAYSMPSQVADPFIRAYLARFYATIARGLQQQQDSLGMTAILLHVGRAFALELEGSRVLVPRLIAAAAHVLGRPTFGSSIFHGTPITDLRRASIHLLGMVLPLANHFGTVDIHQADAQEIAAAAAAAAAAATSGNGSLPGSVSIPGAATGVGGVSAAGAATQAQGSNSVASLGSLGPTSSFAALRSRINDLLIAAFETTPANDNGNWICALCALHVQAHEEIHTTPLLAPRIVRSVLRQLERIRWNAEVTRVALDVLSGVAPLQRLIAQTDGQLAREVVLSLCGYIDSQAMQPKQKHTADLHSMIVGAYQCMLHWVVGSGGSRQNQWILRDKPCLDAVIEVVELGLTGAKSRRPGSASATSGSGVSGGAQGGQSAQGAGGASGAAGLSGYGGYGGAGATGASGAAGQAGGGGGSGGASGGGGGGDGGGLSSVGSGIGAEGAATGPLVKETKSAHPASKRVQEMAELVLVNLLNHLGNFPPPSGPSGMSTLLDEGELLAGLVRASASSVAKERPFSAESHIRYFVVDNGTILGLLERPSEADGPGVTMIVRDQTGKYSWNAHMMYMSRRDYLRVRPDASSASLRPRPSEFNPRQSILVSSSTDLMLFASATASATASLGSSFESEVLSSSLGATPQPTPPPSSQAAPPHHAHPQSQPPVQTPGGLAVLVYTADRIPPIHAILEGNLAGLQRTVDPLVQAQAEKEAARLARVTATVPPFPDPGTTIDVPPTADRYRGECKFQTARLLMSHLGLLSSANVAPQGASRVRARVLELEPDSRLAESLRALDATPARDCERVSVVYVYAGQRDSLAIAANGIGSADYAAFLHSLGWPVLLRDHPGFSGGLDAVPSMVTAPYHSDPLTEIVFRCPALATELGAEERRALVREDAFVVAWVEDMDDAAFFPYAASGVRTVLCVNPMRCGLFRVRVVGRASAGPLLDGMVVSRRSLGTLVRQTALNTSKKARLADKDAGRPLATRKRLIEEAVSRARREVAPADFYTSIFTDLPAVGYVAGAVPALLSSEV* # PASA_UPDATE: g10054.t1, single gene model update, valid-1, status:[pasa:asmbl_4447,status:3], valid-1 NODE_24_length_61280_cov_41.7273 . gene 31916 34812 . + . ID=g10054;Name=g10054.t1 NODE_24_length_61280_cov_41.7273 . mRNA 31916 34812 . + . ID=g10054.t1;Parent=g10054;Name=g10054.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 31916 32180 . + . ID=g10054.t1.utr5p1;Parent=g10054.t1 NODE_24_length_61280_cov_41.7273 . exon 31916 34812 . + . ID=g10054.t1.exon1;Parent=g10054.t1 NODE_24_length_61280_cov_41.7273 . CDS 32181 34391 . + 0 ID=cds.g10054.t1;Parent=g10054.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 34392 34812 . + . ID=g10054.t1.utr3p1;Parent=g10054.t1 #PROT g10054.t1 g10054 MMAVEVQLPPVLQTAPQSTLDAINAGESIASVNSIPVISSPDERTGDGVPSSASSLLIRPLEGLVRSVVGVSTTAQQANTMASPLSPTAAASAAHAGASLEDDACFTMCHAPSLSSVLSRLSDPLSLGAPHAQTVSTTASASSTLHAPPAANSALPSIAIQALHVQLGGDVTQKSHAADRVNADSISMLMSSSLVMCSEMTLADARNSDVFSLASAHFRVDDSGSDMDGISHGAMSRYNAGRADVWSLARFNESTSILDGDVNNHDTYSIATMQSHRSVGGVLANASLDGNGGDASSISASERMQGHYHGRRSSAPSLGSAGGAGHVYGGGAVSGHGGQGQSLAAVGGGAARSPANRNASGVALGDASAGGDDGDGEDDGTCPICLEEVPTGIGSYVMPSCGCAFCEPCIAQFYIVRIEEGDVIFMPCAKCGAPASDEAVQQLVGEYGPDALVRYKELKRRSAIDRDPNLAWCPEPNCNTAVHRSAAVSAEEIRRRAAAALVAGGTIVGVDSSAERKLAQRRHSWPRFGSSRKGKEKRDMDKYGVGIEGAAVDGSGTSSDSTVTHCFVDCTTCHRPFCFDCHGEWHVGVTCEAYVALRAKEKRDKDGERKFRKWAHKKTRKCPECDVKIEKTGDGSCNHMICSVCRTEFCWLCGQKIPPEGHFDRDNIRGCPGLQYGVESLSQLGIAKARARVAGRYAGKAALIALAVPWVIIAAVPVAAYVGVRVAHRKWSMRRR* # PASA_UPDATE: g10059.t1, single gene model update, valid-1, status:[pasa:asmbl_4444,status:12], valid-1 NODE_24_length_61280_cov_41.7273 . gene 46943 49892 . - . ID=g10059;Name=g10059.t1 NODE_24_length_61280_cov_41.7273 . mRNA 46943 49892 . - . ID=g10059.t1;Parent=g10059;Name=g10059.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 49831 49892 . - . ID=g10059.t1.utr5p1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 49785 49892 . - . ID=g10059.t1.exon1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 49785 49830 . - 0 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 49462 49576 . - . ID=g10059.t1.exon2;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 49462 49576 . - 2 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 49227 49276 . - . ID=g10059.t1.exon3;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 49227 49276 . - 1 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 48819 48962 . - . ID=g10059.t1.exon4;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 48819 48962 . - 2 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 48554 48654 . - . ID=g10059.t1.exon5;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 48554 48654 . - 2 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 48022 48225 . - . ID=g10059.t1.exon6;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 48022 48225 . - 0 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 47744 47859 . - . ID=g10059.t1.exon7;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 47744 47859 . - 0 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 47451 47567 . - . ID=g10059.t1.exon8;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 47451 47567 . - 1 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . exon 46943 47244 . - . ID=g10059.t1.exon9;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . CDS 47103 47244 . - 1 ID=cds.g10059.t1;Parent=g10059.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 46943 47102 . - . ID=g10059.t1.utr3p1;Parent=g10059.t1 #PROT g10059.t1 g10059 MLRAACTSARAVSRGGTAIRGYATALSMETPVTDKDLHAYIDSLPEFDRNAFKRWKGSRLSHINLPTNSLEWRVVKNSADKLGESPNLPVLAQKGAGEIPPAGFLHVTPWACTVFSHFSPNGSLGTPKFKSTELITNPVEADQDICIGVSELAPETGPNVALFHYFQWLEQINGLLVAHVAANIAAYPLVMKKISKLWERERRGKATVARDVTVDDVRFQVIDSVKYAKENDVRRPERPYTVFKSRLFFKAREGVNPQGYFYPEDAQVYQEYKAVRNVVPLFDANGSLVGGSDRVVRRNDIVLLKSRLSCNLFDTPVGAVATKHQLRAVSKLRVGTFLDEASPM* # ORIGINAL: g10052.t1 original gene structure, not modified by PASA NODE_24_length_61280_cov_41.7273 AUGUSTUS gene 24988 28992 . + . ID=g10052;Name=g10052.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS mRNA 24988 28992 . + . ID=g10052.t1;Parent=g10052;Name=g10052.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 24988 28992 . + . ID=g10052.t1.exon1;Parent=g10052.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 24988 28992 . + 0 ID=cds.g10052.t1;Parent=g10052.t1 #PROT g10052.t1 g10052 MLSDEERFGRTLLMQCVSFLVWRALLGTTVFVSWTLLRVALFGIHDGYTFARVIYALYATFYVLELPWIPVYISLTLLGTWYGMLYGRCDIEKAIVLAALSLHLIQEYVISLFDKTVLRGHKGAVSSIALSPDGALVATGSADATARLWDVRSGECRAILGRPLHSQGAVNIVAFSPDGSTLATSLNESRDRQVQLWDTTTGARLATLASHEQPVCALAFSPDGTVLATAADSPVFLWDAASGTRRASLTTNSNAGHAPGRLLILSLAFSPDGSRIATACDDKTACLWEVSTGICMKTLKGHTDSVVAVAFSPNGGRVATGSKDFTARLWNAVTGECVGALSGHTDVITAVAYSADGATLGTASADKSVRLWDAAAMTLRLVIGEPRPRAVPVQVDGGQSLPKAGDPADVPKGKHKRKKLDLVMRLRRDIHGALTEFIPYLQEMVFAVIFTVRPFTSAVSSLFHFFRDLDSLSARTKQQSKRITIGVHGTVPVTVYFDKERASMGSADELEPGRLLDDTHLGPVSSLAIWPDGTTLATTSLGTLRFWDVVTGEYRANASGRSGLVNSFAWSRDGRIMATANSDRTARVWEMDVLLKDHRITASSRSHADIPSSPPSINTPSGTNAIASTTTHGGIDSKAGPSVTVGSRIGASSLVAAVLAGHENDIVCISVSGDGLVVATGSRDKTARLWDAATGVCCATLRGHPDTVSSVAISPDGETVATVGTGRVRLWHTPTGVCRATLNTSSLLFSVVFSPDGATLAASVNTLLAAAVSDVQLWDVATGACCRLLSGHSKRVERVAFSPNGTRIVTGSMDHTARLWDVATGEQRQIFSGHTDVVVAVAIARSHKWAVSGGLDNTARLWSPVTGTALCVFGHSYPIVSVAVSPDGRTVLTSGLSKETRLWDAETGVSKDVLNVNSDVAPSHSDFLLNGDSSVFITAGCEGFVTWNPSRGDTGTQADADVKAVVLSFDNGEVTNASGPDSRAHKNTHTMLCLAFSADGQMFATGSDDGNARIWDLATRKLRATLKGHSEPVLSIAFSGDGKAVVTGSADTTARLWNASTGSCSKTFSVHSQPVHCVAFSRDGKMIASAGARDSIVHIWGTAFTLFNSNSKYQLCCPGPVSSLGFSPDGSTLVVASQEILTLWDVAKETRRVTLLGHAQPVLAVAFAHNGQGAVATGSADNTARVWDATGSCCATLDRGGHTDNVVSVAFSPDGKTIATASVDHTARLWDAATGTCHLVMRGHSKAVICIAFSADGRSVTTGSVDKTVRVWSPACLDKVHGARAPPTGRASQGMQLPESATSSANCTDDENTGDNEPAQAAPSKSKQPWWRRR* # PASA_UPDATE: g10053.t1, single gene model update, valid-1, status:[pasa:asmbl_4441,status:3], valid-1 NODE_24_length_61280_cov_41.7273 . gene 29277 31277 . - . ID=g10053;Name=g10053.t1 NODE_24_length_61280_cov_41.7273 . mRNA 29277 31277 . - . ID=g10053.t1;Parent=g10053;Name=g10053.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 31222 31277 . - . ID=g10053.t1.utr5p1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 31164 31277 . - . ID=g10053.t1.exon1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 31164 31221 . - 0 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 30916 31074 . - . ID=g10053.t1.exon2;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 30916 31074 . - 2 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 30612 30727 . - . ID=g10053.t1.exon3;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 30612 30727 . - 2 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 30437 30497 . - . ID=g10053.t1.exon4;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 30437 30497 . - 0 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 30077 30255 . - . ID=g10053.t1.exon5;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 30077 30255 . - 2 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . exon 29277 29779 . - . ID=g10053.t1.exon6;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . CDS 29477 29779 . - 0 ID=cds.g10053.t1;Parent=g10053.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 29277 29476 . - . ID=g10053.t1.utr3p1;Parent=g10053.t1 #PROT g10053.t1 g10053 MDDEKRKIRVPGPIVDAHNHFWDLDRWEYSFPSPDMEVLFRNYLPEHFVEHAGRAGVDKGIYVQVDHNEEEIPWVLELSERHASIAGVVGWVDLTHPDVGSRLDLHRAHSKFVGVRHLTHNESDNKWLMREDVHRGLAELASRGLAFDLLLRPQHLECVPPLAEKFPQLRLVIDHVAKPLIKDGVLDGWKEDIEAAAKHPNVYIKLSGMVTEADHERWTKDHLKPYVEHAVRCFGARRCMFGSDWPVCLLAAEYDEWAHTLHDILRDVGCSDDDVSEVFSGTATRFYRLDL* # ORIGINAL: g10060.t1 original gene structure, not modified by PASA NODE_24_length_61280_cov_41.7273 AUGUSTUS gene 51085 53373 . + . ID=g10060;Name=g10060.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS mRNA 51085 53373 . + . ID=g10060.t1;Parent=g10060;Name=g10060.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 51085 52279 . + . ID=g10060.t1.exon1;Parent=g10060.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 51085 52279 . + 0 ID=cds.g10060.t1;Parent=g10060.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 52577 53373 . + . ID=g10060.t1.exon2;Parent=g10060.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 52577 53373 . + 2 ID=cds.g10060.t1;Parent=g10060.t1 #PROT g10060.t1 g10060 MVSFEGFVVERILSEDPWAKVTTVLGKFDACAHAHAGATAIVIVGRRHLTRNQVASILSVGTRIASTSFQNSIYSKLTATPLDVSLSEVDVTLICPATEDAVRKYASQPCYLVDETALEYQSVVVPYAIKHAARANKWVTNILDGTSEQESMIYSDPDPQHGFVILPDMKWDGRTLSSLYCLAVVRDESLRTVRDLRAHHARLCNQIAEEGRRAISRRFGIRTDCIRAYFHHQPSFYHLHVHMCALGHSPPGMSPERAISLDTVVQLLSGGSTHLSDATFRFAARVEDPLVAQLFAFRFFNRTTPTSDGHGGNILSSGDFVLRRTDPHGRHPTVQSLVDAARASKLKCISVCERDSIAASFAAVSLCREQTTGMVAVPSVEITCSIDLSVCLPCAGLAAGTCLSAGLLVYFPPTLSPAAFEDAPFDCIRRILSHNSREHAAQLCRIVAETRESGLPIPPVVEEMLLMSGGGVGVAGDGVGAGVPMDCSIVWTGAHLQSVFQREQIQATTPGCAYRCGFVSILDALDALSSVSVCCLARPTELLEAFDIALSKSSCSTLTPTENASSALSSVGTAFGELVSALSHRGLKGIEGGSGHAWSRDSHSVVLADCTTLLPLCVGGSGDRLDGLSGHVGSAPGYIPWNDDDVARFVGAVGCTTHMTGLA* # ORIGINAL: g10056.t1 original gene structure, not modified by PASA NODE_24_length_61280_cov_41.7273 AUGUSTUS gene 38649 40854 . + . ID=g10056;Name=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS mRNA 38649 40854 . + . ID=g10056.t1;Parent=g10056;Name=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 38649 38977 . + . ID=g10056.t1.exon1;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 38649 38977 . + 0 ID=cds.g10056.t1;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 39145 39372 . + . ID=g10056.t1.exon2;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 39145 39372 . + 1 ID=cds.g10056.t1;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 39590 39719 . + . ID=g10056.t1.exon3;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 39590 39719 . + 1 ID=cds.g10056.t1;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 39981 40172 . + . ID=g10056.t1.exon4;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 39981 40172 . + 0 ID=cds.g10056.t1;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 40447 40854 . + . ID=g10056.t1.exon5;Parent=g10056.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 40447 40854 . + 0 ID=cds.g10056.t1;Parent=g10056.t1 #PROT g10056.t1 g10056 MAHSISLARYGSLLGGSLRVISVSRAASVHFRSSNLKTVALKAVSPGMRHPFGVQCAPAIYINTRGYATQPAVASTPVKQEESVYVKARAIVGNVKTFFIKMRDGWRLFRSNRKQAKEFRRIAAAESRELNFSEFVVCRQSDRDLRKLIPFILFTLEFPEFLPLVLYYFPNFLPSTFETAAEKSKRLGSAALERISAVVNIYSEAAGAGLISGGARSFGGLLSTADLEQLVTLTPARALALAREKLGAPDVASLPKPLLDIVSRHFAVPGFLPQSYRRGRVSRVLQELATDDGMMRLYGVDRLTWAELRDACHLRALPVPPPPATSASPTLASAVDPSLDAPRRHLTAWLEATTGNQGSTLPMLLLTIARTAVASEEMDAFSRLSSSLSAAQTAAAPQSTARPNTLAPRTPPKAARVEGARVAAAGGR* # ORIGINAL: g10058.t1 original gene structure, not modified by PASA NODE_24_length_61280_cov_41.7273 AUGUSTUS gene 43891 44974 . - . ID=g10058;Name=g10058.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS mRNA 43891 44974 . - . ID=g10058.t1;Parent=g10058;Name=g10058.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 44277 44974 . - . ID=g10058.t1.exon1;Parent=g10058.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 44277 44974 . - 0 ID=cds.g10058.t1;Parent=g10058.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 43891 44116 . - . ID=g10058.t1.exon2;Parent=g10058.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 43891 44116 . - 1 ID=cds.g10058.t1;Parent=g10058.t1 #PROT g10058.t1 g10058 MRRVSFIAGQALNEEEAWAGPLAGSHMYTLRDDGRGHEVIDDGALNRSFGTGGGNCNTHVALATDGRPQSRGALLERRRSLTGTSSETDVLRLRANRPSSSSIVLSKLSNSAPAGSMTIMQRRRRSFSLGTSSLTASLPTATAVSASALKDSPTDTAADSHQVLHRWIDTERGSLRSHEERRLDAIMTAARGSESALVKNAMMRRDFQKRMCNIERSSAVAFARREGEFNVVKESLAKLESSRRPSILPLLDSQHALINASSAVPPVASAPDAVDARVLRRTARSKSALILRVAAEPEPESPANAGE* # PASA_UPDATE: g10057.t1, single gene model update, valid-1, status:[pasa:asmbl_4443,status:3], valid-1 NODE_24_length_61280_cov_41.7273 . gene 41233 43119 . - . ID=g10057;Name=g10057.t1 NODE_24_length_61280_cov_41.7273 . mRNA 41233 43119 . - . ID=g10057.t1;Parent=g10057;Name=g10057.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 43068 43119 . - . ID=g10057.t1.utr5p1;Parent=g10057.t1 NODE_24_length_61280_cov_41.7273 . exon 42466 43119 . - . ID=g10057.t1.exon1;Parent=g10057.t1 NODE_24_length_61280_cov_41.7273 . CDS 42466 43067 . - 0 ID=cds.g10057.t1;Parent=g10057.t1 NODE_24_length_61280_cov_41.7273 . exon 41233 42274 . - . ID=g10057.t1.exon2;Parent=g10057.t1 NODE_24_length_61280_cov_41.7273 . CDS 41263 42274 . - 1 ID=cds.g10057.t1;Parent=g10057.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 41233 41262 . - . ID=g10057.t1.utr3p1;Parent=g10057.t1 #PROT g10057.t1 g10057 MGPHCIYRTVTTDVLKMQSSQESQQQMQAGRSANTHSSFSTQLLRKRSDAATSSVAAAESAALRQLPLEIARDHVAARRRLSVNATASAALGNSNKTTPATPAVEQSPAPRRRRDSTAVPVPLSRYCVDGQDASLFTPEVEQNLEERRAEVMSTLKGGDASLSTVAKNSATRRMLIDQVSKLDKASATTSALMSEKIEEIRARLAHLKNMQRHAGDETEAQCEHAESAADDDSEAHTQTRTMRSVSLGSTRGPSFAGSPMAQRRQRAFSDAGRQADDSRRSPEGYCHDPLTVSNSSEYASGGVPLGGHGHVRFRDDMSPSPSTDSERGYLPAVGSPLPPQRGILRTEHSSFPLSPMTIRKSTSEGGRRKSPTTSPTMSANSAVVSTHTSVYSEAQSPLFIRKPCHGLEMQWAAPWMAAGTPCPEQGATCTTTPQLTDRGCTTTPSNSSCDQPFDWPSQYQPAHSSSGVPNVSPSLPIAADKSLSPEGDCDGDAHRKPLLALRARMFRRASTDEAPRNTAAFTLEGRCGEIRESTETI* # PASA_UPDATE: g10055.t1, single gene model update, valid-1, status:[pasa:asmbl_4442,status:3], valid-1 NODE_24_length_61280_cov_41.7273 . gene 34813 38218 . - . ID=g10055;Name=g10055.t1 NODE_24_length_61280_cov_41.7273 . mRNA 34813 38218 . - . ID=g10055.t1;Parent=g10055;Name=g10055.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 38143 38218 . - . ID=g10055.t1.utr5p1;Parent=g10055.t1 NODE_24_length_61280_cov_41.7273 . exon 37974 38218 . - . ID=g10055.t1.exon1;Parent=g10055.t1 NODE_24_length_61280_cov_41.7273 . CDS 37974 38142 . - 0 ID=cds.g10055.t1;Parent=g10055.t1 NODE_24_length_61280_cov_41.7273 . exon 34813 37835 . - . ID=g10055.t1.exon2;Parent=g10055.t1 NODE_24_length_61280_cov_41.7273 . CDS 34855 37835 . - 2 ID=cds.g10055.t1;Parent=g10055.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 34813 34854 . - . ID=g10055.t1.utr3p1;Parent=g10055.t1 #PROT g10055.t1 g10055 MDSHDVDCSKANRMHNSAALCTSTATADRNAVEAVLCKGHRRPCLIKTGVRDGPSKGKSYYVCSIRDGSCSHVSTATLAGTSHVTVCAVHGQPISLRSQSTTESPAVQYRCASNERTQWCESYSVMTFTDKENAPASNNPPACAPRAGYVSETKGSENARAETGAFFANASNGREGLGSHITTSSYVGSESVHVAGRAEPHTHTTLSISGGINDGCARPVSAAPSQSRTHDDTNSKTDIIVGLEDRLRMCLQRKKDAKTALEAKSIAVEIDKVHRSLSAARALCTTREDRPVQTHTHTHTHAHVGRNPGSVGVRASATPSMTGTTTASGPAADGQSAVKKEKKRENKCASGRRNAREDAVDSDGQLVDRDDLADKARVVLLRLGRARDIARGESASSLASTDKRRKDGGVVALPEISASLACVKTRLLPHQVEAVRWMMWREGSGGGNPRGGILGDDMGLGKSLDVIAVVMCSKAMHPATTKPTLVVCPASLLCQWASEVKAHTDGIAECVVYHGSNRTKKAKGASDSPFSGVDFVVTTYATLEREHRLHFKALEDAGEASLSDDSNGSADDDASAATNPNSPLFASQWARAVFDEGHVIRNKRTSSFAAAAAVADRSDARWIVTGTPVQNSLADVAAALQFLRVPVYGTAHGFKAVVSAARDAPAAARAVLASVMLRRTKDEMKDDGTPLVALPRKERVEHAVDMLPDEKRVYDAVVTWCRKFVAGEINGTSTATVRNKMLTPDAHSHSRYLVALTRLRQAACHVSLLKASVDSSLSEHLDGVFPLKGRKEKRQDDDLSAMFASLEVTKEAGVKREIAQVADGVDICVREARGVSVLDAVDAPSGKMNAMARIATEAAADGHMCVIVSQWTSMLDVAARRLSTEGFSLSRVDGGMTPARREAEITAFFHASSSLGTSSSKGRKVRHAMLLSLCAGGVGLNLTCASHVIMLDAHWNPAAADQAADRVHRLGQTADAVHIHTLLYRGTVDERCAKVQARKRSLARRVYRDTNAVSSSGAKRVTGKKEDSSAEATDNSSTNVAELIEMCGL* # PASA_UPDATE: g10051.t1, single gene model update, valid-1, status:[pasa:asmbl_4453,status:12], valid-1 NODE_24_length_61280_cov_41.7273 . gene 10348 23452 . + . ID=g10051;Name=g10051.t1 NODE_24_length_61280_cov_41.7273 . mRNA 10348 23452 . + . ID=g10051.t1;Parent=g10051;Name=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 10348 10469 . + . ID=g10051.t1.exon1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 10348 10469 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 10647 10713 . + . ID=g10051.t1.exon2;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 10647 10713 . + 1 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 10852 11116 . + . ID=g10051.t1.exon3;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 10852 11116 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 11286 11379 . + . ID=g10051.t1.exon4;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 11286 11379 . + 2 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 11558 12231 . + . ID=g10051.t1.exon5;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 11558 12231 . + 1 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 12388 15919 . + . ID=g10051.t1.exon6;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 12388 15919 . + 2 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 16234 16417 . + . ID=g10051.t1.exon7;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 16234 16417 . + 1 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 16632 16799 . + . ID=g10051.t1.exon8;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 16632 16799 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 17039 21279 . + . ID=g10051.t1.exon9;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 17039 21279 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 21474 21640 . + . ID=g10051.t1.exon10;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 21474 21640 . + 1 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 21960 22114 . + . ID=g10051.t1.exon11;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 21960 22114 . + 2 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 22287 22340 . + . ID=g10051.t1.exon12;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 22287 22340 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 22547 22714 . + . ID=g10051.t1.exon13;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 22547 22714 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 22894 23048 . + . ID=g10051.t1.exon14;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 22894 23048 . + 0 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . exon 23287 23452 . + . ID=g10051.t1.exon15;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . CDS 23287 23410 . + 1 ID=cds.g10051.t1;Parent=g10051.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 23411 23452 . + . ID=g10051.t1.utr3p1;Parent=g10051.t1 #PROT g10051.t1 g10051 MEWFRRLSVSTRGREKGVLSESLTGNIRCAVCVKQGLGHAGRKDDAEGDAILRGLWGKHLLDPTTSATLEAFLCAFISRHSHVDPLHDIALFDSHSVGSPHVTNGHRQSIAVVVAFMAKAVPAACDVEGHNFEMVIDLARLIGNASKTVVEDVDYGNTDRAPMRLLSLLIRACAVLAAYSHNRSVLVHHDATSSISRIVGTVIERLTFYTCGDAHVPRTDTWCAEAIGVAAVGAITLERLVDPGCSWRRHLTTWEAADYGVTLPLALAASAVATSAAAQANPLSPRELGTPPSTPTSFGSPPTPSAMSTFFVSLPSQSPAHAHVVEGLVDGVRSLDVIGSRGDGLLSVWEYALRELLLHATGALCWQCVPAQNKLRECGGLEVIVGVVGWRKALETALGAADVGHMLALAPLEFRTQVVAWRVLRAVTAANAVNNRRLSAMEGFQRTIDFFLWTATVGPLCAPDGTYAGLDQSPVCLPLGASRMLASRGSSDSLASLADESGSIRGRPLRQNSSDATQPQGNSSPTQPIPASEAQPSSRAVAKRKLRLSCADCPLPLPEFDVADDEWARAARNVRPQTPDFSLPASATATPELLILYRMLLSACIAPASAQVYPAGPLDDALPQQGSAGGVSALQSASTTPHVGLPLSGVILDMYLPTSRDSDVNRRARAVLRDERPELQLLAVEFFVRLLGSLPTVISVSNDVADAASRQQALVAVLPVLSQRGVGVLFGDVFCGGSQAPALVLSGTASCETESLRSKLCRCILDLLPLAACIRGGTPAVQCDTLLTLMRAHIDQPRVVRGLSVLLIRAVCGGGRAVREALASLDFITSTLLPVLKLYAPSGSETSLEADARMAVLSLVRVFAFGLPLTSDDATPKWPAFVFSCRRFGLQLIAYLSNLNTSEALCDWILARMAEVVRAVADSSSSNFAETTSGFLTSFLDVFTSLPHGGKGPIRVRVGMMACMRSMTSGDTQQQMQGALIEAGCFVRIVSLLTTESGSSDPIGLCGAVIATLTSLMESSDAHKERFKRDVGYEHLRSSIFLCTEGHITREIVVRLFDMLVDGSFSLSKRYTVTNPDVVFLLLEISGSMDADTRTWLLEMLFDVVAKSFGNRTQFCDSGVISYLVGRAPVHAADADTLERIARLIELLGGHSMTASELKTFVGMLRLEGGYRPTYALRMLEALQRTIRKDGPLRFFDFPVGDATGIDVPRIEKWSSGAGGFTFSAWVRLEPFDAHALRRRETAPSRALPYEPRLYAFCTSKGEGFEAYISPPGHLSVAVISKGERKSVKFDFQFDPCKWYCVAIVHAGSRKPWVQSEVRLYVNGVHVAKSVLRVFSSSDPLVECRFACGSDRLSPATRTSLCGQMGAIYMFSDALTPTHILGVHGLGPNYSSVFQPMDAPNHPGFEPLFDGSLSSRLLLSYNAKACMGQVCVDLTPRASGSSGRVKMDALLRGCKCVTRHVKDAINSLGGMQMLLILLAHLDRPTQRAVCGVDGGPASLAADYSVDARLTTQFFRVIAEVIRGDATTEDLMAQCRGFATINVLLLQMHPGHVSADTFQPLWRLAETVSNAELRMDILRYIVFDFRLWIYGDISVHSACVQAAFAAVSLNHDACRHLYGVRFVLDTLSQFYWYSPEHTFSYATEPAKHSVTGEVVGRRLSNEDVRTVRMMLLSMMGTLLNESTSRDDAVAITSFLCACGDAEQVAEVLDFILQIITSSRRPHVADVMAQHGGPELYYGLLCSPSDRVRTLALRTATVLVSADRSTESKHRKRLRLEETGFHGVRLVLSRHPLSTEVLEELLDLACEGTPLCRNPGPLCASLSLLSVADLSVRFSVLTCAYRSIRGNGEACVAMLKQAHWPAVMLEPLANVEPAASMERGGASVLELTLDVAAAVLWGVMETERKGWKALEDFLLLLERSKAVGDTVQARRDLLERVLCGVAEELKRSEAARKNPVYVNNVVHCLLLVEEFVFMRYAFDSSLRQHGTPHPKYLHHTHPHLSHPVRRESAGAIETGHSGALALPPTRVHANSLSTVSDKQRDRQQQHEQQQQQSTPPRHNAHAKSTNGSDDVDSEEDAPSERWDDVHLALRILGIADLLNLTYTVSYGGADIVGGGKSHLRVGGVLRLSTKVALRSLFHHDVSVCDDAVRRLQLMIEGPLADAPAPRAMHVLSTVNKALLASRRRGLGNHCRLASLMRVAMRKYRGVITPSTTSGQSSPTRALSPEMGAPLSPGLTVLPPGDFSDEPSDTDMEWHRQFARVVDRHSREYESADLAVLMPYLSRRRARREKALSERLDRSRQIVTQSERRFEEAVSTYWNTRKQAEDERRQHVTAERENDRRVALRQWRASVQFLTGERGAFAPRVPVMARWKLDRTENFSRMRRKLTRNYEFNDHSEASRGRDEGLHARERRLTQAQKDKDKDKEKDKEHADDKDNARLSGDVSAAGVSLLTAEVDALLNLSLSVRATGDTDEDNVAEDDWSLVSQSTTSMGAESPNGGPLAASASASASVNPALLSLAQQLQMQQSEERLVYATQCELVSLMTVTPGRIELTTHNLCFYASRPSPDDKAAVSAAASKELSDPADTMSRDFKWPLDQIREIHLRRYMLRRSALEIFLVEQTNYFINFERRERNRVYTKLLSLRPPNLIYSESRSPAELLRKSGLTHKWQRGLISNFDYLMQLNTIAGRTYNDLNQYPVFPWVIADYESPTLDLSNPKTFRDLAKPVGALNEKRLEFFDERYNSFVDPSGVVDKFHYGTHYSTSATVMYYLIRVEPFTTLHIQLQGGKFDHANRQFFSVPSTWHSVMTSTSDVKELIPEFFYFPEFLENQNNFDLGVLQAGPRIGDVVLPPWASSPEEFIRLNRLALESEYVSERLHEWIDLIFGHKQRGPAAVEAKNVFYYVTYEGAIDLDAIQDPTERAAIEAQINNFGQTPCQLLRRPHPKRLTAAERAGNNGGFGGPMPLIPASRRANTFLGGTQSTASMSDRAMERTRSLSGSDNSNKGGDGGSGAGGGSGGGVGSSSSLHVPGSATLGPSTQQQRGLRAYEVSVSRDGEGVAYVGIPETQLHAFMYNGMPDRVVTIGSQGTLASHGWLPATSNSLAPAPFTFDADPLLATSNPRRIGGGPFAQDVEMSSKLFCLSHDGKFVISGGHWDNSFRVTVVDSGKTIQSIAKHNDVVTCLATDESGKVLVTGSADTTLMMWETVYAGGTLVIDARPFQTLYGHDAEVLCVAINTELDVIVSGSKDGTCIVHTVRQGRYVRTLLPPRPEYLGSYVPQVTLAGIAEHGAIVVHTQYRSYTQKSHFGLHVFSINGKLLASATLEDGLAGVVIGRAGDHLVSAGEHGTVAIHDLHSLQTLYSTGVNHEVQTLSLSPSEAFVMLGLKTGNLVILTAG* # PASA_UPDATE: g10050.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4452,status:12], valid-1 # PASA_UPDATE: g10050.t1, single gene model update, valid-1, status:[pasa:asmbl_4451,status:12], valid-1 NODE_24_length_61280_cov_41.7273 . gene 836 9943 . + . ID=g10050;Name=g10050.t1 NODE_24_length_61280_cov_41.7273 . mRNA 836 9943 . + . ID=g10050.t1.1.5b6be70b;Parent=g10050;Name=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 836 908 . + . ID=g10050.t1.1.5b6be70b.exon1;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 836 908 . + 0 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 1420 1740 . + . ID=g10050.t1.1.5b6be70b.exon2;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 1420 1740 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 2203 2366 . + . ID=g10050.t1.1.5b6be70b.exon3;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 2203 2366 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 2694 2921 . + . ID=g10050.t1.1.5b6be70b.exon4;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 2694 2921 . + 0 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 3195 3444 . + . ID=g10050.t1.1.5b6be70b.exon5;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 3195 3444 . + 0 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 3630 3746 . + . ID=g10050.t1.1.5b6be70b.exon6;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 3630 3746 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 4034 4198 . + . ID=g10050.t1.1.5b6be70b.exon7;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 4034 4198 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 4501 4677 . + . ID=g10050.t1.1.5b6be70b.exon8;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 4501 4677 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 5136 5300 . + . ID=g10050.t1.1.5b6be70b.exon9;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 5136 5300 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 5518 5611 . + . ID=g10050.t1.1.5b6be70b.exon10;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 5518 5611 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 5782 5870 . + . ID=g10050.t1.1.5b6be70b.exon11;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 5782 5870 . + 1 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 6053 6220 . + . ID=g10050.t1.1.5b6be70b.exon12;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 6053 6220 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 6382 6567 . + . ID=g10050.t1.1.5b6be70b.exon13;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 6382 6567 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 6756 6923 . + . ID=g10050.t1.1.5b6be70b.exon14;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 6756 6923 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 7110 7298 . + . ID=g10050.t1.1.5b6be70b.exon15;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 7110 7298 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 7528 7728 . + . ID=g10050.t1.1.5b6be70b.exon16;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 7528 7728 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 7926 8328 . + . ID=g10050.t1.1.5b6be70b.exon17;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 7926 8328 . + 2 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 8524 9031 . + . ID=g10050.t1.1.5b6be70b.exon18;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 8524 9031 . + 1 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 9271 9428 . + . ID=g10050.t1.1.5b6be70b.exon19;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 9271 9428 . + 0 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . exon 9704 9943 . + . ID=g10050.t1.1.5b6be70b.exon20;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . CDS 9704 9845 . + 1 ID=cds.g10050.t1.1.5b6be70b;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . three_prime_UTR 9846 9943 . + . ID=g10050.t1.1.5b6be70b.utr3p1;Parent=g10050.t1.1.5b6be70b NODE_24_length_61280_cov_41.7273 . mRNA 836 9943 . + . ID=g10050.t1;Parent=g10050;Name=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 836 908 . + . ID=g10050.t1.exon1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 836 908 . + 0 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 1420 1740 . + . ID=g10050.t1.exon2;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 1420 1740 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 2203 2366 . + . ID=g10050.t1.exon3;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 2203 2366 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 2694 2921 . + . ID=g10050.t1.exon4;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 2694 2921 . + 0 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 3195 3444 . + . ID=g10050.t1.exon5;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 3195 3444 . + 0 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 3630 3746 . + . ID=g10050.t1.exon6;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 3630 3746 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 4034 4198 . + . ID=g10050.t1.exon7;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 4034 4198 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 4501 4677 . + . ID=g10050.t1.exon8;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 4501 4677 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 5136 5300 . + . ID=g10050.t1.exon9;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 5136 5300 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 5518 5611 . + . ID=g10050.t1.exon10;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 5518 5611 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 5782 5870 . + . ID=g10050.t1.exon11;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 5782 5870 . + 1 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 6053 6220 . + . ID=g10050.t1.exon12;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 6053 6220 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 6382 6567 . + . ID=g10050.t1.exon13;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 6382 6567 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 6756 6923 . + . ID=g10050.t1.exon14;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 6756 6923 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 7110 7298 . + . ID=g10050.t1.exon15;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 7110 7298 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 7528 7728 . + . ID=g10050.t1.exon16;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 7528 7728 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 7926 9031 . + . ID=g10050.t1.exon17;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 7926 9031 . + 2 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 9271 9428 . + . ID=g10050.t1.exon18;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 9271 9428 . + 0 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . exon 9704 9943 . + . ID=g10050.t1.exon19;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . CDS 9704 9845 . + 1 ID=cds.g10050.t1;Parent=g10050.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 9846 9943 . + . ID=g10050.t1.utr3p1;Parent=g10050.t1 #PROT g10050.t1.1.5b6be70b g10050 MISSQLRVCCAIAAAVLVLSVCVGVTRAADPPCNPAWVSTELSVARAGLTGVAFDDVAVFVGGGSGPGRQAFDVIDMYNATSRRWTAANLGIARDQVATALVRSAGVVIFAGGRLADGRISKTIEAYNPLTGAWASANLTVARYGASAEVVLTTPPRIVIVGGWDGTGPTNATDVFTFSGGKFTTVTQSYVLKARHAFAASTTWTSGSVSRAFFAGGIASGATTNTDQIDVFNGTVFINNTLSIMRLAVARHALTGVTVGNAVIFAGGKIGLFEYSADIDILLVTAALDKTTVVRTLKLSVPRARPAAAVFQNVAYFAGGLSNSHSDMSSVIDIVDPVSLSVTSATLSVARAMFVGVTVRNQAIFAGGWTGSGVSSRVDIRICAEVDCVVSAWSSPSLCTATCGGGNQTRTRTVTTTPTAGGAQCPSLIEVTPCNSQACVAADCLVSEWSAWSACNIAAPCGGNSTIVRTRSVTRAPSNGGSACPTLNETQLCYGKPCAVNCVVSAFGEWSNCSAQCDGGSSSRVRSILTAPSNNGTACPTLVETVECNKKPCPPVNCVTSDWSTWSECYDLDAPLCNGTGRRTRTRTVLVAPIRGGAECGGLQEDEVCYSPPCPVDCVVGEFSAWGACSVSCGGGWHESKRVVLTQPAFGGRECPSLSRGEPCNMAPCNNATVDCVVTNWGDSVCRPLAQGPTCGGLGVTTRTRTVVSNATGDGLACPALTSDVDCALPSCPIDCVYGNWTEWTPCSSECGGGSTSRRRLIDVEANFGGKPCDQTTFEEKTCNENACRPVNCTVSDWGVWSTCEIITAAKCGVASNGTQSRSRSIVTQNKYGGAPCPPLVDYKSCSGPACDDTGTKSEDCVVGNWTAWTPCPACQLGATLPLTTRTRPIITARQGNGIDCPELQQSRECTEIRPCSAAPSATPKPTNGAESGKPEPRPSESSKPEPRPSESPKPESGKPEPRPSESPKPESGKPEPRPSESSKPESSKPEPRPSESSKPESSKPEPRPSESSKPESSKPEPRPSESSKPESGKPEPRPSESLKPESGRPEPRPSESPKPESGKPEPRPSESGMPDQPKPSPTKGPKAPPADLPKNKAEAAVELEIKVAATVDEFKAKYLPNLVSAIVKALNEMFTEKKPIMRDVNRVARAAAFTSDNVVVTDVYAENGSIKVIFYANTPSGASAAPVSRDSLKQAVAQNQAAIATSVDVSATDMAVTNGYETATQTGPGATESSKSSGGSGAGVAAGAAIGGIAAVALVAGGGYYYHKRRQSGGSSGGNGFVKRSESKEILELDKDMSMAFNPLHKPDTDLYYEERDIHC* #PROT g10050.t1 g10050 MISSQLRVCCAIAAAVLVLSVCVGVTRAADPPCNPAWVSTELSVARAGLTGVAFDDVAVFVGGGSGPGRQAFDVIDMYNATSRRWTAANLGIARDQVATALVRSAGVVIFAGGRLADGRISKTIEAYNPLTGAWASANLTVARYGASAEVVLTTPPRIVIVGGWDGTGPTNATDVFTFSGGKFTTVTQSYVLKARHAFAASTTWTSGSVSRAFFAGGIASGATTNTDQIDVFNGTVFINNTLSIMRLAVARHALTGVTVGNAVIFAGGKIGLFEYSADIDILLVTAALDKTTVVRTLKLSVPRARPAAAVFQNVAYFAGGLSNSHSDMSSVIDIVDPVSLSVTSATLSVARAMFVGVTVRNQAIFAGGWTGSGVSSRVDIRICAEVDCVVSAWSSPSLCTATCGGGNQTRTRTVTTTPTAGGAQCPSLIEVTPCNSQACVAADCLVSEWSAWSACNIAAPCGGNSTIVRTRSVTRAPSNGGSACPTLNETQLCYGKPCAVNCVVSAFGEWSNCSAQCDGGSSSRVRSILTAPSNNGTACPTLVETVECNKKPCPPVNCVTSDWSTWSECYDLDAPLCNGTGRRTRTRTVLVAPIRGGAECGGLQEDEVCYSPPCPVDCVVGEFSAWGACSVSCGGGWHESKRVVLTQPAFGGRECPSLSRGEPCNMAPCNNATVDCVVTNWGDSVCRPLAQGPTCGGLGVTTRTRTVVSNATGDGLACPALTSDVDCALPSCPIDCVYGNWTEWTPCSSECGGGSTSRRRLIDVEANFGGKPCDQTTFEEKTCNENACRPVNCTVSDWGVWSTCEIITAAKCGVASNGTQSRSRSIVTQNKYGGAPCPPLVDYKSCSGPACDDTGTKSEDCVVGNWTAWTPCPACQLGATLPLTTRTRPIITARQGNGIDCPELQQSRECTEIRPCSAAPSATPKPTNGAESGKPEPRPSESSKPEPRPSESPKPESGKPEPRPSESPKPESGKPEPRPSESSKPESSKPEPRPSESSKPESSKPEPRPSESSKPESSKPEPRPSESSKPESGKPEPRPSESLKPESGRPEPRPSESGKPEPRPSESGKPEPRPSESLKPESGRPEPRPSESGKPEPRPSESGKPEPRPSESGKPEPRPSESPKPESGKPEPRPSESGMPDQPKPSPTKGPKAPPADLPKNKAEAAVELEIKVAATVDEFKAKYLPNLVSAIVKALNEMFTEKKPIMRDVNRVARAAAFTSDNVVVTDVYAENGSIKVIFYANTPSGASAAPVSRDSLKQAVAQNQAAIATSVDVSATDMAVTNGYETATQTGPGATESSKSSGGSGAGVAAGAAIGGIAAVALVAGGGYYYHKRRQSGGSSGGNGFVKRSESKEILELDKDMSMAFNPLHKPDTDLYYEERDIHC* # PASA_UPDATE: g10061.t1, single gene model update, valid-1, status:[pasa:asmbl_4445,status:12], valid-1 NODE_24_length_61280_cov_41.7273 . gene 54380 57476 . - . ID=g10061;Name=g10061.t1 NODE_24_length_61280_cov_41.7273 . mRNA 54380 57476 . - . ID=g10061.t1;Parent=g10061;Name=g10061.t1 NODE_24_length_61280_cov_41.7273 . five_prime_UTR 57450 57476 . - . ID=g10061.t1.utr5p1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 57205 57476 . - . ID=g10061.t1.exon1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 57205 57449 . - 0 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 56626 56991 . - . ID=g10061.t1.exon2;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 56626 56991 . - 1 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 56266 56457 . - . ID=g10061.t1.exon3;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 56266 56457 . - 1 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 55908 56021 . - . ID=g10061.t1.exon4;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 55908 56021 . - 1 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 55536 55692 . - . ID=g10061.t1.exon5;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 55536 55692 . - 1 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 55203 55304 . - . ID=g10061.t1.exon6;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 55203 55304 . - 0 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . exon 54380 54977 . - . ID=g10061.t1.exon7;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . CDS 54618 54977 . - 0 ID=cds.g10061.t1;Parent=g10061.t1 NODE_24_length_61280_cov_41.7273 . three_prime_UTR 54380 54617 . - . ID=g10061.t1.utr3p1;Parent=g10061.t1 #PROT g10061.t1 g10061 MGLLSRDLRVHVAIASLLRLCLIAYGEWHDAHSPVKYTDADYGVFMDAAGHVARGGSPYERLTYRYTPLVAFMMLPSVLLHSCLGKLLFSALDILCALVMHRILRMRMLDRRTAVTCAWWWLYNPIVVGISTRGNAEALVSVPVLLSLYYIMRKKVVAAAVAHGIAVHLKLYPIIFTLPFLLALDSNFDGTRVTLPNVDSPYGRNDTYKRTSMSLRMTAGLNLHQRNTLRDGRAAQQEGGSLANTSRITFLVVSGLTFTVLFGAMYLLYGREFLNEGYVYHLMRRDNRHNFSAYFYPIYLSMGGTSLSVYERMFAIASFAPQAIAVVLVSIGKRRDLPLTMFASGFVFVAFNKVVTSQYFVWYIALLPLILPSLRMSFSRATVLIGVWLGCQALWLASAYGFEFEGRASFSAMWLYALLFFASNILVLQQVLSHAVRMPTFRRGKLVPFSDPHSSSQKLLEKHAFGSPFVAGYSYGVGSGSSGADGGRKVGEGVSPAMSASRSDPSARLFT* # ORIGINAL: g10062.t1 original gene structure, not modified by PASA NODE_24_length_61280_cov_41.7273 AUGUSTUS gene 58042 61280 . + . ID=g10062;Name=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS mRNA 58042 61280 . + . ID=g10062.t1;Parent=g10062;Name=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 58042 58324 . + . ID=g10062.t1.exon1;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 58042 58324 . + 0 ID=cds.g10062.t1;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 58457 58685 . + . ID=g10062.t1.exon2;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 58457 58685 . + 2 ID=cds.g10062.t1;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 58824 59030 . + . ID=g10062.t1.exon3;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 58824 59030 . + 1 ID=cds.g10062.t1;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 59568 60857 . + . ID=g10062.t1.exon4;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 59568 60857 . + 1 ID=cds.g10062.t1;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS exon 61050 61280 . + . ID=g10062.t1.exon5;Parent=g10062.t1 NODE_24_length_61280_cov_41.7273 AUGUSTUS CDS 61050 61280 . + 1 ID=cds.g10062.t1;Parent=g10062.t1 #PROT g10062.t1 g10062 MIPKHVRQRVHHAYFRVPSAFSLIVICLSVAVLRVGVANGADDADGTTGDMGTCGSTAPAMVMNEHPSFRLELKPLGGRGVRAGKVSLLRIAIMDGDSPVRLHQLGVFRDQQFMHVRVLSTDLLVIGHATPRAKKSTRLHDNAPANGTMVWSYPTTLAQDEIIFTFPSVGWYLVSAVIPVLSPTAGIPAVRLLLGKRLFVRPDTLDMHAQGPATPHWVPAMGAGIVPEKSLDDRPLHVMPSFEYASSGFVSLASFLGVHVPATAGTTAAATTPILTPYTVRGRIDMPPSKLPTGDPVRIEICLMPPPELRRQPSLLDDAVRRDDEEIEEVVVPHDLNAVHAVNLATELANKTAATVHTPHDAVVSAVHGAHPPAHSGSREAHLHNATTQRTRDLRHVTARDINVDGVDATTARDSEAPVAVDDNPAEAEALVKLAGTWLAIRERFVASAKLVVAAEHCDSLAIASQSRGAKGKGGMADFTSAAALALGAMSNPFAGAASQPDGSDAVVLGPRGVVVPRASQSHGAVPPTLNGVHAPPQAHARDPADVIVAEFADDDDSGSNPFLADDGSPNPPDGGTKLGGGGGGGGGLSLDVNEMPLNILPAALQSPSEESQGAECVGFVVCFGAPGAYRLIVEARDPESNVIVAAFDVRTEEAKPMVSEGSLVDVHARLILSPGTLIVSCVSLGALMSAMSLTIRRHRRRGGVTAVAEKETWFVRMLRNAMYILLWYIFSTVLTFYNKVCFTGS # ORIGINAL: g2781.t1 original gene structure, not modified by PASA NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS gene 133 726 . + . ID=g2781;Name=g2781.t1 NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS mRNA 133 726 . + . ID=g2781.t1;Parent=g2781;Name=g2781.t1 NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS exon 133 347 . + . ID=g2781.t1.exon1;Parent=g2781.t1 NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS CDS 133 347 . + 0 ID=cds.g2781.t1;Parent=g2781.t1 NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS exon 589 726 . + . ID=g2781.t1.exon2;Parent=g2781.t1 NODE_4941_length_1126_cov_37.5918_potentialcontaminant AUGUSTUS CDS 589 726 . + 1 ID=cds.g2781.t1;Parent=g2781.t1 #PROT g2781.t1 g2781 HLRSLQNFNALMAILSGLNSSAVHRLRATWDEVPQKYRDLLAEMSEQLSSDMSFKSYRHIIAKAQRPYIPYLGVYLTDLTFVEQGNPDVLPGTDGFVNFTKRMHEWQIIRQIMDSKG # PASA_UPDATE: g1115.t1, single gene model update, valid-1, status:[pasa:asmbl_4827,status:12], valid-1 NODE_2696_length_5427_cov_42.8933 . gene 3577 5099 . - . ID=g1115;Name=g1115.t1 NODE_2696_length_5427_cov_42.8933 . mRNA 3577 5099 . - . ID=g1115.t1;Parent=g1115;Name=g1115.t1 NODE_2696_length_5427_cov_42.8933 . five_prime_UTR 5033 5099 . - . ID=g1115.t1.utr5p1;Parent=g1115.t1 NODE_2696_length_5427_cov_42.8933 . exon 3577 5099 . - . ID=g1115.t1.exon1;Parent=g1115.t1 NODE_2696_length_5427_cov_42.8933 . CDS 3587 5032 . - 0 ID=cds.g1115.t1;Parent=g1115.t1 NODE_2696_length_5427_cov_42.8933 . three_prime_UTR 3577 3586 . - . ID=g1115.t1.utr3p1;Parent=g1115.t1 #PROT g1115.t1 g1115 MGERKGGHLERKSSTASRASDPEGSKNMSRNISEGGSGPKIRLDCLAALATQFGDLATMHEVGLLTIEEAREVADSILHDYGHWVDEDLVSMLIAKTDGCVPLYLTLACESIMMTTVGSTKQMSQLTAIERLEPTVSGIMQQIFGDLESAFSMDIVRESLCMIACSRGGLTRDELRQLVCGVADLPVPEGSDGSSQLHSASAALLNSKTSGVDWYRFYVAISPFLRTTPVHEDGDEVLNFIHPLFSFAVRSRYLSSCPRSCESFAAGDLCVHLALHADVVNHEAYDAHTHAKLAAYFAYVIARSVAKKKVAAAARAESFEDDDEDEQPANRKESVAARKESSSQREATSRKDSQSQSNGHGPPPPPEAQLSYANASPRVLSALAFHKIHSRDWSGIHQVLTNIEYLETRCESGDVVAISEDLQHALRVWPADVDEPKRSRLSEYVRFFRYYLGAYKKGKKGHFSKSAFRKSAKGFFPPGFD* # ORIGINAL: g1114.t1 original gene structure, not modified by PASA NODE_2696_length_5427_cov_42.8933 AUGUSTUS gene 2648 3156 . + . ID=g1114;Name=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS mRNA 2648 3156 . + . ID=g1114.t1;Parent=g1114;Name=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS exon 2648 2670 . + . ID=g1114.t1.exon1;Parent=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS CDS 2648 2670 . + 0 ID=cds.g1114.t1;Parent=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS exon 2777 2963 . + . ID=g1114.t1.exon2;Parent=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS CDS 2777 2963 . + 1 ID=cds.g1114.t1;Parent=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS exon 3031 3156 . + . ID=g1114.t1.exon3;Parent=g1114.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS CDS 3031 3156 . + 0 ID=cds.g1114.t1;Parent=g1114.t1 #PROT g1114.t1 g1114 MYESVKTSLQDESRAWDGVLAKRRLCQQKQPALLGSRHPTTPDSGADFGTMRPRYHGVLFQVLLKCVVLNAGHSLTHSTLQAEQLNNGVEYLRTRFEAAKLALCALEKRDG* # ORIGINAL: g1113.t1 original gene structure, not modified by PASA NODE_2696_length_5427_cov_42.8933 AUGUSTUS gene 1 785 . - . ID=g1113;Name=g1113.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS mRNA 1 785 . - . ID=g1113.t1;Parent=g1113;Name=g1113.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS exon 1 785 . - . ID=g1113.t1.exon1;Parent=g1113.t1 NODE_2696_length_5427_cov_42.8933 AUGUSTUS CDS 1 785 . - 0 ID=cds.g1113.t1;Parent=g1113.t1 #PROT g1113.t1 g1113 MSPNATDPMAAMMPIVVETMMPKNGEPALPEGWEMGVTDDGDVFFIDHVNQKTTWEDPREGNKTNLVAKFCDAWKQATPEERDAVIICLGGDEGESRNVRQRLSMLCSGPLPSGWEESTTADGEPFFIDHVNQKTSWVDPRLRFIYEMDEDLPAGWEEAIDANGFVYYIDHISKKTQREHPNESSYGSLARLLRYAAGNSSPRKAKLSFAESSSLSPSSSESSGFRHSARSTSVSGNGSMPVRASGLLRMFSAPAALLYGA # PASA_UPDATE: g12391.t1, single gene model update, valid-1, status:[pasa:asmbl_2014,status:12], valid-1 NODE_1573_length_10403_cov_42.9673 . gene 3068 6768 . + . ID=g12391;Name=g12391.t1 NODE_1573_length_10403_cov_42.9673 . mRNA 3068 6768 . + . ID=g12391.t1;Parent=g12391;Name=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 3068 3152 . + . ID=g12391.t1.exon1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 3068 3152 . + 0 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 3454 3556 . + . ID=g12391.t1.exon2;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 3454 3556 . + 2 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 3779 3981 . + . ID=g12391.t1.exon3;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 3779 3981 . + 1 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 4260 4423 . + . ID=g12391.t1.exon4;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 4260 4423 . + 2 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 4672 4777 . + . ID=g12391.t1.exon5;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 4672 4777 . + 0 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 5021 5704 . + . ID=g12391.t1.exon6;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 5021 5704 . + 2 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 6035 6139 . + . ID=g12391.t1.exon7;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 6035 6139 . + 2 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . exon 6466 6768 . + . ID=g12391.t1.exon8;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . CDS 6466 6560 . + 2 ID=cds.g12391.t1;Parent=g12391.t1 NODE_1573_length_10403_cov_42.9673 . three_prime_UTR 6561 6768 . + . ID=g12391.t1.utr3p1;Parent=g12391.t1 #PROT g12391.t1 g12391 MSSLNVLGKGSITGEGALIKMPSEVTVREKGPFVKIQIGKVKFKTGTAPTGKTLSEWNEECKLAVKEKDTELELTVRVGKDDDLGFVVFPLAELATYSRGKRWFPLLRKKGVPQGELCLDCWASKVQEVKATPDKKGKPKSLHSLSISRDAPMSQSSASINSVSGATTAVAPPAEKVTPSKPKEKVEVVVKAPEVTSIHPKKGPEEGGTLITIKGNNLGNDAADIVGLSVCGADAMGSLEYVSPSKITCVSPPGKVIGKGTVIITTASGGVGSCSATFKYKAKEKEKEEKKEDKVEVASVNGESERDGDTDSIASSKKYRSMSKNSEGAREVAALHAQSASASDVRVKTPEISGVSPNNGPAAGSTAVSIRGDHLGDSADDVVSLTICGVDVLSTMQYVSSNLLRCTTKPGSGTGPVVIITRSGGRGVSSLNFTYNAPLKMRDAAAAEAEAQKERHQDNSDNPDQWSRTKLAAEVKRLHKHISELENENKSLLNYVDRLVVRIMEIDPEALMRD* # ORIGINAL: g12393.t1 original gene structure, not modified by PASA NODE_1573_length_10403_cov_42.9673 AUGUSTUS gene 9145 10001 . - . ID=g12393;Name=g12393.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS mRNA 9145 10001 . - . ID=g12393.t1;Parent=g12393;Name=g12393.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 9494 10001 . - . ID=g12393.t1.exon1;Parent=g12393.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 9494 10001 . - 0 ID=cds.g12393.t1;Parent=g12393.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 9145 9305 . - . ID=g12393.t1.exon2;Parent=g12393.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 9145 9305 . - 2 ID=cds.g12393.t1;Parent=g12393.t1 #PROT g12393.t1 g12393 MEVHLASATDLSFLRDSAVTKVLSLDSAYHYRTRADFFREAFRVLSPGGTLATVDIVLGPALDGSACDRRNSAPQSNSHKRGDVDEKEAVDGVRRMSAQTGAVNSCVSLCDPTCLSHLPLCTRAIVSAVATAASVPVRNLYGATAYVERLERSGFTNIVVEDITGDTFEGFERFVHRQRESIADLIDSRRYLKFRAAAWMMATCARRDYIRCIVVTADKPTQ* # ORIGINAL: g12390.t1 original gene structure, not modified by PASA NODE_1573_length_10403_cov_42.9673 AUGUSTUS gene 398 2351 . - . ID=g12390;Name=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS mRNA 398 2351 . - . ID=g12390.t1;Parent=g12390;Name=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 1964 2351 . - . ID=g12390.t1.exon1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 1964 2351 . - 0 ID=cds.g12390.t1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 1681 1744 . - . ID=g12390.t1.exon2;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 1681 1744 . - 2 ID=cds.g12390.t1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 1498 1552 . - . ID=g12390.t1.exon3;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 1498 1552 . - 1 ID=cds.g12390.t1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 1084 1207 . - . ID=g12390.t1.exon4;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 1084 1207 . - 0 ID=cds.g12390.t1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 809 861 . - . ID=g12390.t1.exon5;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 809 861 . - 2 ID=cds.g12390.t1;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 398 516 . - . ID=g12390.t1.exon6;Parent=g12390.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 398 516 . - 0 ID=cds.g12390.t1;Parent=g12390.t1 #PROT g12390.t1 g12390 MATTPGKDPISINPNMYDPHIVGVDKDKNGSATYGDETTRLLGHGAVRSASVNSRDSHRVKQASGCAAVIDMTIDGFDALMAKQPLVLTPIVHTDGHQAVLIPRLGLALFAEFLGTMILVGVGSGAHQPMLNRDAAMVDSASYALIIMALIYTLNHISSHFNPVVTIAMVISKRLPLRSGLLFIPVQCLGAAAGAGLVKAFIPNSEAYHYGATSLAPGISVQTGILMEAFMTFNLIMTIFFSSVRADAKTAFAPLPIAAVVFTQCII # ORIGINAL: g12392.t1 original gene structure, not modified by PASA NODE_1573_length_10403_cov_42.9673 AUGUSTUS gene 7112 8952 . + . ID=g12392;Name=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS mRNA 7112 8952 . + . ID=g12392.t1;Parent=g12392;Name=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 7112 7234 . + . ID=g12392.t1.exon1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 7112 7234 . + 0 ID=cds.g12392.t1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 7364 7379 . + . ID=g12392.t1.exon2;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 7364 7379 . + 0 ID=cds.g12392.t1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 7823 7904 . + . ID=g12392.t1.exon3;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 7823 7904 . + 2 ID=cds.g12392.t1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 8080 8210 . + . ID=g12392.t1.exon4;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 8080 8210 . + 1 ID=cds.g12392.t1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 8381 8490 . + . ID=g12392.t1.exon5;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 8381 8490 . + 2 ID=cds.g12392.t1;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS exon 8761 8952 . + . ID=g12392.t1.exon6;Parent=g12392.t1 NODE_1573_length_10403_cov_42.9673 AUGUSTUS CDS 8761 8952 . + 0 ID=cds.g12392.t1;Parent=g12392.t1 #PROT g12392.t1 g12392 MSAFTSIGLLQIEAAAEQLRHAHSIEVDALAEKEAILAALRSEQDEVITRLRDKAAEYKLEALKETEAIKQHETRIKRCQEKARDYESARSAFVSGGAIAKSELAAIRGNIVALEKEVASLKSEHTKKINSEELELLAVDCAEAEACRDDVRAKLTRAIAQRDDLKIRYGLLGGGRASEGQPQPAVTSRAPPPHKHVTAVAHGRTNDPFAVVNNRRQ* # ORIGINAL: g6656.t1 original gene structure, not modified by PASA NODE_2556_length_5908_cov_28.5745 AUGUSTUS gene 109 1332 . + . ID=g6656;Name=g6656.t1 NODE_2556_length_5908_cov_28.5745 AUGUSTUS mRNA 109 1332 . + . ID=g6656.t1;Parent=g6656;Name=g6656.t1 NODE_2556_length_5908_cov_28.5745 AUGUSTUS exon 109 610 . + . ID=g6656.t1.exon1;Parent=g6656.t1 NODE_2556_length_5908_cov_28.5745 AUGUSTUS CDS 109 610 . + 0 ID=cds.g6656.t1;Parent=g6656.t1 NODE_2556_length_5908_cov_28.5745 AUGUSTUS exon 992 1332 . + . ID=g6656.t1.exon2;Parent=g6656.t1 NODE_2556_length_5908_cov_28.5745 AUGUSTUS CDS 992 1332 . + 2 ID=cds.g6656.t1;Parent=g6656.t1 #PROT g6656.t1 g6656 MQALITKWGAPPSEDRRNPLLDAREEVCEILRGFSFRDGTRQEIFAGETFHAGSTGRHTQANVGLDWLDADIYIRLQVRLVSQPHMWTTFVVPTPANDIVSGGCRLQAHIRLPSRDFSFAYAHYDVSSITCLNELQAFITRVFGNSYVSIGAYYVEKLSDRYLAIVCSAIPSYAIECVATGTDMEWRLTNWARLHGRVQGHVVLYYLCELLHLAITNREVLHAQYGTNVLPDQQHTLSHFASCLRQLCELLARFDGAPPSEASDVVDSVQRLLTRCSCSA* # PASA_UPDATE: g14481.t1, single gene model update, valid-1, status:[pasa:asmbl_9869,status:12], valid-1 NODE_894_length_16124_cov_40.0881 . gene 8346 13173 . - . ID=g14481;Name=g14481.t1 NODE_894_length_16124_cov_40.0881 . mRNA 8346 13173 . - . ID=g14481.t1;Parent=g14481;Name=g14481.t1 NODE_894_length_16124_cov_40.0881 . five_prime_UTR 13107 13173 . - . ID=g14481.t1.utr5p1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 12957 13173 . - . ID=g14481.t1.exon1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 12957 13106 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 12696 12799 . - . ID=g14481.t1.exon2;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 12696 12799 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 12403 12531 . - . ID=g14481.t1.exon3;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 12403 12531 . - 1 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 11987 12179 . - . ID=g14481.t1.exon4;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 11987 12179 . - 1 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 11690 11795 . - . ID=g14481.t1.exon5;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 11690 11795 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 11255 11373 . - . ID=g14481.t1.exon6;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 11255 11373 . - 2 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 10989 11112 . - . ID=g14481.t1.exon7;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 10989 11112 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 10465 10510 . - . ID=g14481.t1.exon8;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 10465 10510 . - 2 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 10119 10188 . - . ID=g14481.t1.exon9;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 10119 10188 . - 1 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 9677 9982 . - . ID=g14481.t1.exon10;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 9677 9982 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 9155 9514 . - . ID=g14481.t1.exon11;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 9155 9514 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 8844 9068 . - . ID=g14481.t1.exon12;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 8844 9068 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . exon 8346 8701 . - . ID=g14481.t1.exon13;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . CDS 8495 8701 . - 0 ID=cds.g14481.t1;Parent=g14481.t1 NODE_894_length_16124_cov_40.0881 . three_prime_UTR 8346 8494 . - . ID=g14481.t1.utr3p1;Parent=g14481.t1 #PROT g14481.t1 g14481 MMSAAGGVPFFTTPYINPAILPPFDNDDDEFVDRKPLKRPLSDNALWTQQDDVLLSAIVQQLGTRNWSDIAKRLNGRTAKQCRERWQGYLDPGLDRRPFTVHEQHILASSRHTLGNKWSEIAKLLPGRSETMIKLHCATLPPQAQPARRKDKSAPAAPVGGMSLPVFAAEAQGGRTKAAPKRAYAQGKENVPPKPGHMNHVNAADVNAYGKRVADAELDATVKRPKRQYTRRKKADANDSSQAVPGTAKGRPVVSNRAAYAQSSQAKGQLHTLPVAGFATDDDFRGVFVHDGPLVVDPHTMEPCFGSRDPFAFLLDPFDEHDISPAMQAPYCHSRQFTPPSILRKTKRMDFGFSPFGNFATPFSPSMFFNSSAPTPFAARNAPPHGQQPQQHLNAQQQQAMMRLRGLHKGAGHVMSTPLAVSGLVGTHSMAETPTPLRLAMNQFATHDDYPFMSSPMLLVPEMQDASMGLATPSPLLGTGGVSSSGKYVLNGGRLSVNVRTPPTGRTPKAPFQFKCKGRSPPLPKGQTLQLTSSLFGTSSLLGSTTASGGRAEGTKHAVFDFLGTPVAQVAPYIPTLSQQCASINARTARIRRGISLGDAGDDARRLSFASSVPDIGKSPAFESRNATPDCKTSMDIKSPSVEELESNSMWQTVLGQTADQKYLTTQARHLLAISGRTPLGLCDRLTGMAVDNSIHPLTTLSATPAVADVSA* # ORIGINAL: g14480.t1 original gene structure, not modified by PASA NODE_894_length_16124_cov_40.0881 AUGUSTUS gene 2015 8062 . + . ID=g14480;Name=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS mRNA 2015 8062 . + . ID=g14480.t1;Parent=g14480;Name=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 2015 2170 . + . ID=g14480.t1.exon1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 2015 2170 . + 0 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 2524 2636 . + . ID=g14480.t1.exon2;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 2524 2636 . + 0 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 2777 2927 . + . ID=g14480.t1.exon3;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 2777 2927 . + 1 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 3211 3527 . + . ID=g14480.t1.exon4;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 3211 3527 . + 0 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 3851 4099 . + . ID=g14480.t1.exon5;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 3851 4099 . + 1 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 4322 4597 . + . ID=g14480.t1.exon6;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 4322 4597 . + 1 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 4779 6469 . + . ID=g14480.t1.exon7;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 4779 6469 . + 1 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 6649 6813 . + . ID=g14480.t1.exon8;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 6649 6813 . + 2 ID=cds.g14480.t1;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS exon 6963 8062 . + . ID=g14480.t1.exon9;Parent=g14480.t1 NODE_894_length_16124_cov_40.0881 AUGUSTUS CDS 6963 8062 . + 2 ID=cds.g14480.t1;Parent=g14480.t1 #PROT g14480.t1 g14480 MSRGPAHGGHYRRAADPAAPSSDEDEDVDCPLCMEQMDLSDQSFYPCPCGYQICRFCWHHIRNEMNGLCPACRRPYTDNPVEFTPLTPEEIVRLKSEKKQKAAEKRNKEMQSRRSLAGIRVVQKNLVYVIGISPRIAEEEILRRNDYFGQFGRVHKIVVNKSMYPGPTGPSVSAYVTYLRKEDAAAAIHAMDGVVIDNRSLRCSLGTTKYCSYFLRGVSCPNSDCMYLHEVGDEASSYTKEDIQQGLANEEIRRFRPRKEGVAAATVSLPPGHVRSHSDGLDFSDDDTGDDAMPFVEEKEVRPPPEVQVVTHVIPGGNGTAALPAKASWASSMKPAPQPQPPQPAQSQQHVLTKGGKAGQRPLAVSVTIAGSASATAAAPVAQRVVPPKQQLPPTADAFPALPTAVKKKDAAKAPQTNAQRQETSAAALQAAAAAGGGTVTAPAPQRTKVPQVVPTKKSDAKSDGAAALVHTQAGVEAASAKTAPTAQSSALPPRKAVDLQRTPPDMPSASSGSAVSDTQRGDADASSGNAPGAYGVQQQGQHVPQPQQQQHVRQPQQQQQQQQSQQHHPQQPSVLGQFPFHFRSEDFGYGNAYGTPDALLFASVLQQGLASQQQQQQQQQHGGTDNDAPMGFSSLRQLMDDDQVYLGHTAAIGGPGSMGQGMAMGMGHVGMGMGMGHVGMPVAPPPGLRIGDYDGSNPSDLPDDLGFDPWNESAKGLADMMHGGAIPSEHATPQKGAGHAAAHLAHMPWHIGYQLPFQQQAQGGAHGQQHALGMPFLPHAHMPGLAVLGGMGLGGLSQNADGTGAVDGSANGSARSAGGVESILSQQQRSDSGANQFAIPEGRTWQDNLRALFPNVNISFGPIDGVGAIESGDRQAQAQPQAQSQPQSQLPSQFQSQAGNGDRRGDDTHASSQTHNERDGPENAHLLASLPGIEPWQFQQAMLSGAAPDQWGSADAQAQQAHAMGFGGWGYPPLPPGFGESFFALQQATSDAGLPFQDPAIMAAHMSGFAGFGYGDGQLGGAQHTMGMDSIMASFFNSGALQPDTEASPLPPLEGEVYRPPSNRSVRRALVMGDSEPTASGNDSRGFMYDKVQQSRGFDSGGDDDMIDGALSALRRDMDDDSVPVHWEDSPHGTSTVSVPQQPKTSGAAAFAAPVHKPVIDPKARKREKKQRKEAAAAAAAAAAAAASAQKAQALADKKKGGKSASAATVTHAQPSQPAQPSQPQAKSTGKAPSNSAGGSGVVHATQPGMRPVDPRAPEGHPVVKLATGSKHSSAASSPKRPTPASLAGDHSAPATTTHVQQQQQQQQQQQQQNNTHSHGDAHQQGKGLPPRGKATSGKAPEHGVSGIQQAGQSGQSGQGGDDPSGRVETLEREVENARREVEALESKLIAVMRKNQGARSMVF* # PASA_UPDATE: g14479.t1, single gene model update, valid-1, status:[pasa:asmbl_9870,status:12], valid-1 NODE_894_length_16124_cov_40.0881 . gene 174 1186 . + . ID=g14479;Name=g14479.t1 NODE_894_length_16124_cov_40.0881 . mRNA 174 1186 . + . ID=g14479.t1;Parent=g14479;Name=g14479.t1 NODE_894_length_16124_cov_40.0881 . five_prime_UTR 174 175 . + . ID=g14479.t1.utr5p1;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . exon 174 268 . + . ID=g14479.t1.exon1;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . CDS 176 268 . + 0 ID=cds.g14479.t1;Parent=g14479.t1;5_prime_partial=true NODE_894_length_16124_cov_40.0881 . exon 414 705 . + . ID=g14479.t1.exon2;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . CDS 414 705 . + 0 ID=cds.g14479.t1;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . exon 852 1186 . + . ID=g14479.t1.exon3;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . CDS 852 970 . + 2 ID=cds.g14479.t1;Parent=g14479.t1 NODE_894_length_16124_cov_40.0881 . three_prime_UTR 971 1186 . + . ID=g14479.t1.utr3p1;Parent=g14479.t1 #PROT g14479.t1 g14479 EGDFKKFLQQRYTLEDWTLWLKGIVSKCLDSARDPKTHEEAARQFLLRWSFFSSLVIRDLTLRSATSFGSFHLIRLLYDEYIFHLIERRRQRLLRLSNKYCILKDDCSLDGSAGAAGLSMKRSRDDEEGGGSRLDLSDGSLGIDSANVTVGTMGGDEAPPKKARVDE* # PASA_UPDATE: g14482.t1, single gene model update, valid-1, status:[pasa:asmbl_9871,status:12], valid-1 NODE_894_length_16124_cov_40.0881 . gene 15025 15929 . + . ID=g14482;Name=g14482.t1 NODE_894_length_16124_cov_40.0881 . mRNA 15025 15929 . + . ID=g14482.t1;Parent=g14482;Name=g14482.t1 NODE_894_length_16124_cov_40.0881 . five_prime_UTR 15025 15089 . + . ID=g14482.t1.utr5p1;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . exon 15025 15344 . + . ID=g14482.t1.exon1;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . CDS 15090 15344 . + 0 ID=cds.g14482.t1;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . exon 15581 15644 . + . ID=g14482.t1.exon2;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . CDS 15581 15644 . + 0 ID=cds.g14482.t1;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . exon 15829 15929 . + . ID=g14482.t1.exon3;Parent=g14482.t1 NODE_894_length_16124_cov_40.0881 . CDS 15829 15929 . + 2 ID=cds.g14482.t1;Parent=g14482.t1 #PROT g14482.t1 g14482 MRSFQAAIVVVAALLVAAAAAAPAQKDAPTTCHALALAGGGDRGAFEAGAMLGLIENLPADQVAWNVITGISAGAINTGALCQYKVGDEIAGVNWLVDQWLSIRKSDIYKDWPLGLVQGFFAESGLFDTSPLIDFLKVH* # PASA_UPDATE: g9401.t1, single gene model update, valid-1, status:[pasa:asmbl_7997,status:12], valid-1 NODE_5310_length_914_cov_44.8021 . gene 1 718 . - . ID=g9401;Name=g9401.t1 NODE_5310_length_914_cov_44.8021 . mRNA 1 718 . - . ID=g9401.t1;Parent=g9401;Name=g9401.t1 NODE_5310_length_914_cov_44.8021 . exon 1 718 . - . ID=g9401.t1.exon1;Parent=g9401.t1 NODE_5310_length_914_cov_44.8021 . CDS 1 718 . - 0 ID=cds.g9401.t1;Parent=g9401.t1;3_prime_partial=true #PROT g9401.t1 g9401 MANSEPTTGPGPAAPDIPDTTKVDALAVESNEEYEPTSLKSVMNMYRDLWRFCPNERSLFATGVACALINGGALPVFSILFSNVTSIFYDSATVIDERLWKYALYCLALGGGVFIASFVWSYLLMTVGERCVVELRVRYFRAVVCQPCGVTDRSRMGEFADRITADMTTIQGAISERVGNFCAGMARLIIGLVIGFYYGWKMTLVVIAVSPVLALVGYLKSKARATGTAASKALVTDGF # PASA_UPDATE: g12891.t1, single gene model update, valid-1, status:[pasa:asmbl_7580,status:12], valid-1 NODE_4750_length_1274_cov_33.3411 . gene 40 1259 . + . ID=g12891;Name=g12891.t1 NODE_4750_length_1274_cov_33.3411 . mRNA 40 1259 . + . ID=g12891.t1;Parent=g12891;Name=g12891.t1 NODE_4750_length_1274_cov_33.3411 . five_prime_UTR 40 41 . + . ID=g12891.t1.utr5p1;Parent=g12891.t1 NODE_4750_length_1274_cov_33.3411 . exon 40 275 . + . ID=g12891.t1.exon1;Parent=g12891.t1 NODE_4750_length_1274_cov_33.3411 . CDS 42 275 . + 0 ID=cds.g12891.t1;Parent=g12891.t1;5_prime_partial=true NODE_4750_length_1274_cov_33.3411 . exon 679 1259 . + . ID=g12891.t1.exon2;Parent=g12891.t1 NODE_4750_length_1274_cov_33.3411 . CDS 679 990 . + 0 ID=cds.g12891.t1;Parent=g12891.t1 NODE_4750_length_1274_cov_33.3411 . three_prime_UTR 991 1259 . + . ID=g12891.t1.utr3p1;Parent=g12891.t1 #PROT g12891.t1 g12891 YSTLIYVDADWMPVSNVDELFDTAIEHEFSAGYCSRPGIVEPCFNAGMLVFRPNEKTKNEIMDMWFDMSRRGLCPNDQVLLWHYFAGSNRWNPISYAFNVRRMIYHPMRAYHFACCKYPKPWEMASPPTEQDARGFTGPLASVDDILVLWWRHFYNAIDLWQLRGWWARAQMLLRNGQKHG* # PASA_UPDATE: g11844.t1, single gene model update, valid-1, status:[pasa:asmbl_2700,status:12], valid-1 NODE_1817_length_9087_cov_78.0259 . gene 96 8702 . + . ID=g11844;Name=g11844.t1 NODE_1817_length_9087_cov_78.0259 . mRNA 96 8702 . + . ID=g11844.t1;Parent=g11844;Name=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 96 233 . + . ID=g11844.t1.exon1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 96 233 . + 0 ID=cds.g11844.t1;Parent=g11844.t1;5_prime_partial=true NODE_1817_length_9087_cov_78.0259 . exon 566 822 . + . ID=g11844.t1.exon2;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 566 822 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 1116 1236 . + . ID=g11844.t1.exon3;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 1116 1236 . + 1 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 1442 2352 . + . ID=g11844.t1.exon4;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 1442 2352 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 2613 3525 . + . ID=g11844.t1.exon5;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 2613 3525 . + 1 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 3827 4243 . + . ID=g11844.t1.exon6;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 3827 4243 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 4401 5297 . + . ID=g11844.t1.exon7;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 4401 5297 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 5699 6421 . + . ID=g11844.t1.exon8;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 5699 6421 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . exon 6705 8702 . + . ID=g11844.t1.exon9;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . CDS 6705 8456 . + 0 ID=cds.g11844.t1;Parent=g11844.t1 NODE_1817_length_9087_cov_78.0259 . three_prime_UTR 8457 8702 . + . ID=g11844.t1.utr3p1;Parent=g11844.t1 #PROT g11844.t1 g11844 VNSLTSRLDDVVEENEELRRRLGLEPRAVIDLADLRQKKAVELEQLRAVNRELSREIDRLEEERLQMKARLRHQALGRGERAAELGLNADDLLAVEQYADALKEGRDERPTQSRSERARDTALQQTMTMQLERASMGQRGTSQAQGIFSTAEEGTRLQLAKFADEVKDLTRQVSKLGEDRGALSRDVNSLRVENELLRATAAELAEAAKNTAKTSGAQEIRVRTDALDRVIDLLQAKQAYAPMQTGGFGAGGTKDASAANSAEVERLKGANEELRSNLLVAKKDLLKAVGEAERRAAEADTLRKQVEMLKAMDAPGGKAPLSAAIHDGTPRNHLDVIATLNEQLTDVLAELSAKDAKCRDLEEGLEGAKRSLSVALHQQGLLYQEHMAAKQQWEESKTAVDNKVLELKVMREQDAVKIEELERMRAALANGPDAATARLAELVRTATVLRVNEKSLVRRHLVMQELESALRRENTRLKSTLTQMDAAMRERVAHLQRQRDAASYRAQSLQAALDESVPLRDLEALNRKFDSLAAKYRDLLEKDQSRIEYETAAAASAVETRLLRDRCELLERELDLTKEARRIAEASIASLHDAAQQQQQQQTSAQTPDGKGAPMRGHNEIFVLRQRIATLEMTGASENERAELCARRLEQAERLGKDFEKRNADLEARFAELTRMCSASQESERQLRAEMDRAVPREEADRYISRIAELEKKANEALIEMGRLKEVSEAAVAQTMAVQSMQRMEDAEVQSLRNQVMELQTQGDDAATIGRLHHQLMAFQVSEGVAIRKLERAESEAIALRQAVIRLEKRVYEREEQLYHFRLTARQKTRHVQRQVEHMRQQYSGAVTLDRQERSTQAMRALDDKRCAMQSEIGTLRAEKASLEDKIAEASLVREQMEELRRTVAENRQNERILEWHQKVSDTRLECLRATRRAVQLAERERQLEAELAGSEIAVSNLESDLIARERTSEERQIAWEHREYELEGKIDALEREREELRRAAARVEEETGAVPDPSLPVSHQLEHALRKLKDAAQAIAAERQQSVDMRQRLDALEELLGKEKQTGITRDKEITRLRMTAVGTESDARIRMAGTLGGTGDDFDDTIAQYAESNAAALRMAQETVASLRILLAQKEETLSKYQDMLRAAREDAEGERERHLGEVKQLTERLQRQADDSLARLREKAATAMGRSAVGQMGRPSADKIAELEEVISEQEHELHSLGTRMKRAESAVLSAQTEARTARDNAERDRVRARDDREALTKEHAEETQRMHNEIGQLRHELQEMTVELDIVRRDLDEARDLATRGPSGSMKALVQRLRTELSAKEKQQEALGRILGQLKGEFATSARENAEGMLREGGKNAGADGLDDGAQAVAVRITDLQRRMEKMRDEMKRQSETEAALRLELQRRDSGDNQMEAELRRAKRVAKEALAREQKAAVEAEQLRMKIDTNEHVQELLKKIKVLQARVGDGDEDGVAKWETDKKWQRRVEILKARLSEKSRELEESERKVAIQRDTIARMEKEKLRLQSKGGRTGSNASLNAGGGGGGDAYVLDWAGAAELMDAKARIHALEDENASLRRDVSVEKEGELKRLAEANDFLRSTVASQEAEIEALSLGRSGGVEEFVADELRVAKETALSMQARVLDLEKENLALRFDNEQANIDLPRLQNRIKDLERYVADVCRPVMDESEKWRKDAIAKDPKRAELESVVDALKRLAERLQRENDALKKQTAGTATPDARRLQKKVEELEARLKAGASAGGGEGDVGKQLEKTRAENERMMRRLKHEEADKTRLQRDIALARAEREEIDRKIADLARTVGVKPQPLPALGRNGDTRGADGRDAGPDEADAEGLDTYRTIRSISERHEELRSAFETAGSALADCRRQLDAANTSLAAEQERADALGRQLQQSGAGRQSREGQMPRRVDAERMAAMEQENAALKRELAAFDPAFFEELEDLKYSHKEAMRKIALYEKRLGVVNANAPVAERSRGAAAEPQVRGSRPISARVQASTVPLLETRGLGERPVASTSTARPARESGRR* # ORIGINAL: g1731.t1 original gene structure, not modified by PASA NODE_3776_length_2779_cov_53.6672 AUGUSTUS gene 364 1314 . + . ID=g1731;Name=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS mRNA 364 1314 . + . ID=g1731.t1;Parent=g1731;Name=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS exon 364 483 . + . ID=g1731.t1.exon1;Parent=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS CDS 364 483 . + 0 ID=cds.g1731.t1;Parent=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS exon 638 789 . + . ID=g1731.t1.exon2;Parent=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS CDS 638 789 . + 0 ID=cds.g1731.t1;Parent=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS exon 1059 1314 . + . ID=g1731.t1.exon3;Parent=g1731.t1 NODE_3776_length_2779_cov_53.6672 AUGUSTUS CDS 1059 1314 . + 1 ID=cds.g1731.t1;Parent=g1731.t1 #PROT g1731.t1 g1731 PFDRKQFLECIKELVRLEKSWIPNQMGFSLYIRPTLIGTQESLGVGPSARALLYVGCSPVGPYNKSGFAPVKLLADAKFVRAWPTAPVRTRNYAPTIKPQQAAAAKGYQQILWLFGPDHELTEVGTMNVCVHWKNEAGELELATPPLDGTILTGVTRDSVRASGASARSLSAASL* # PASA_UPDATE: g13355.t1, single gene model update, valid-1, status:[pasa:asmbl_9696,status:12],[pasa:asmbl_9700,status:12], valid-1 NODE_858_length_16640_cov_39.1145 . gene 7119 8402 . - . ID=g13355;Name=g13355.t1 NODE_858_length_16640_cov_39.1145 . mRNA 7119 8402 . - . ID=g13355.t1;Parent=g13355;Name=g13355.t1 NODE_858_length_16640_cov_39.1145 . five_prime_UTR 8363 8402 . - . ID=g13355.t1.utr5p1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . exon 8088 8402 . - . ID=g13355.t1.exon1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . CDS 8088 8362 . - 0 ID=cds.g13355.t1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . exon 7843 7909 . - . ID=g13355.t1.exon2;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . CDS 7843 7909 . - 1 ID=cds.g13355.t1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . exon 7504 7626 . - . ID=g13355.t1.exon3;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . CDS 7504 7626 . - 0 ID=cds.g13355.t1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . exon 7119 7361 . - . ID=g13355.t1.exon4;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . CDS 7242 7361 . - 0 ID=cds.g13355.t1;Parent=g13355.t1 NODE_858_length_16640_cov_39.1145 . three_prime_UTR 7119 7241 . - . ID=g13355.t1.utr3p1;Parent=g13355.t1 #PROT g13355.t1 g13355 MKATSIVLAAVFVAVLVTVASANHAHSHSHSHSHSHSHSHGSHSHGSHSHSHGDHEDHDHDHDHDHDHDHDHDHDHEGDGADDGMIDEFMKHHMDEGHGMGEEDFDPNAFFIMHDFNHDDALDASEIESMYRVELSQDDKSDEEYNAEVSGMVQQVFDIVDKNGDQLVSREEFMQSLEESGRPGDHADPVDDEF* # PASA_UPDATE: g13356.t1, single gene model update, valid-1, status:[pasa:asmbl_9694,status:3], valid-1 NODE_858_length_16640_cov_39.1145 . gene 8766 10221 . + . ID=g13356;Name=g13356.t1 NODE_858_length_16640_cov_39.1145 . mRNA 8766 10221 . + . ID=g13356.t1;Parent=g13356;Name=g13356.t1 NODE_858_length_16640_cov_39.1145 . five_prime_UTR 8766 8804 . + . ID=g13356.t1.utr5p1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . exon 8766 8817 . + . ID=g13356.t1.exon1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . CDS 8805 8817 . + 0 ID=cds.g13356.t1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . exon 8976 9085 . + . ID=g13356.t1.exon2;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . CDS 8976 9085 . + 2 ID=cds.g13356.t1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . exon 9234 9723 . + . ID=g13356.t1.exon3;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . CDS 9234 9723 . + 0 ID=cds.g13356.t1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . exon 9977 10221 . + . ID=g13356.t1.exon4;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . CDS 9977 10041 . + 2 ID=cds.g13356.t1;Parent=g13356.t1 NODE_858_length_16640_cov_39.1145 . three_prime_UTR 10042 10221 . + . ID=g13356.t1.utr3p1;Parent=g13356.t1 #PROT g13356.t1 g13356 MADVARATELLAQLGPKSSRRDPFDAAINLLKSPFFASIVEALREASGDNASPPAPSTAATVAAAAQSDTPRTSTTSASAVAVAPAHVAVASPPAAAVAVAAVTAPAAVPVAAPAAEPTRTIEIPKGPSGLGFNVMGGAEQQSPIYVSRIIEGGVAAKIGLLRRGDALLAVNGESTDGASHERAVQLLKAAVGSVTLTVQFRLPDLEKLEQMYVARSGASTPVRK* # PASA_UPDATE: g13357.t1, single gene model update, valid-1, status:[pasa:asmbl_9697,status:3], valid-1 NODE_858_length_16640_cov_39.1145 . gene 10295 12799 . - . ID=g13357;Name=g13357.t1 NODE_858_length_16640_cov_39.1145 . mRNA 10295 12799 . - . ID=g13357.t1;Parent=g13357;Name=g13357.t1 NODE_858_length_16640_cov_39.1145 . five_prime_UTR 12698 12799 . - . ID=g13357.t1.utr5p1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . exon 12563 12799 . - . ID=g13357.t1.exon1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . CDS 12563 12697 . - 0 ID=cds.g13357.t1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . exon 12255 12336 . - . ID=g13357.t1.exon2;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . CDS 12255 12336 . - 0 ID=cds.g13357.t1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . exon 11748 12003 . - . ID=g13357.t1.exon3;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . CDS 11748 12003 . - 2 ID=cds.g13357.t1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . exon 10295 11491 . - . ID=g13357.t1.exon4;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . CDS 10315 11491 . - 1 ID=cds.g13357.t1;Parent=g13357.t1 NODE_858_length_16640_cov_39.1145 . three_prime_UTR 10295 10314 . - . ID=g13357.t1.utr3p1;Parent=g13357.t1 #PROT g13357.t1 g13357 MAKGKKKKSKEKLTDEERQLLSEQLVLRREEDRKRKEELTRQYLKEKLAAEEKNSKINNLKIQNHWRDIMRLAKAQDLKRDIEILIQTFEREVDRKDAIIKSLARDLEEAEEQYQMALHSHMQNVDQVVGLQETRLGDLETEFIDELETIKAEFNREREMIISQHREERQNLADIMYAMEYEFNEAEAEARHEFQSVRDEVKNKNLEEKHALRIQLEGTVEDLWRQFQNALNNYNANTEERKHAFETLKEKDMRSAKTIEQQMKRLQRIQESVAYIKQRMAGNATECEERNRGLKDEKDAIATHFQELKSRMNSYRDSERGRLTRLTLASNKAMKALKQRLNDAERMLKLAEMNRKLETEQEKVLPFYAATVTDNEADAAAAASARPEGAAPPSSPPGTAAPAKGKEAARGNDDAPASLPSLEPIEAPAEPATSLVYGDDGKPITEHRAMDQFWKRYNKVLLDRLALERDRDELGAENARLRGLLKQYLDGISVSEEVISHENPLFVVNGRTNVRLAQGYGAGTLGNRPTAVDAVHVYNTQYAPTRTRL* # PASA_UPDATE: g13354.t1, single gene model update, valid-1, status:[pasa:asmbl_9695,status:12],[pasa:asmbl_9699,status:12], valid-1 NODE_858_length_16640_cov_39.1145 . gene 3013 6647 . - . ID=g13354;Name=g13354.t1 NODE_858_length_16640_cov_39.1145 . mRNA 3013 6647 . - . ID=g13354.t1;Parent=g13354;Name=g13354.t1 NODE_858_length_16640_cov_39.1145 . five_prime_UTR 6611 6647 . - . ID=g13354.t1.utr5p1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 6499 6647 . - . ID=g13354.t1.exon1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 6499 6610 . - 0 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 6049 6132 . - . ID=g13354.t1.exon2;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 6049 6132 . - 2 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 5775 5928 . - . ID=g13354.t1.exon3;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 5775 5928 . - 2 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 5226 5366 . - . ID=g13354.t1.exon4;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 5226 5366 . - 1 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 5054 5079 . - . ID=g13354.t1.exon5;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 5054 5079 . - 1 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 4599 4750 . - . ID=g13354.t1.exon6;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 4599 4750 . - 2 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 4378 4435 . - . ID=g13354.t1.exon7;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 4378 4435 . - 0 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 4147 4235 . - . ID=g13354.t1.exon8;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 4147 4235 . - 2 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 3728 3879 . - . ID=g13354.t1.exon9;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 3728 3879 . - 0 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . exon 3013 3489 . - . ID=g13354.t1.exon10;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . CDS 3282 3489 . - 1 ID=cds.g13354.t1;Parent=g13354.t1 NODE_858_length_16640_cov_39.1145 . three_prime_UTR 3013 3281 . - . ID=g13354.t1.utr3p1;Parent=g13354.t1 #PROT g13354.t1 g13354 MKVAVVVCVCVALAALVAAETVDPDAKRDVQDIVTSKGYSCVLHEVVTDDGYILGTYRINAAGSTGDGKPAILLWHGLLDSCFTWVINEPNESLAYILADLGYDVWLGNNRGTMYSRAHVKLDPKKAEFWKFSYDEFASLDLPNTVDYIRLMTNQSAVSYIGHSEGTIQMFAALSATPEFAEKIKVFVGLGPVATVGHMTNEFMLWLAKLRVDDFVSIFDDKQFFSTPPKLILPVEEQFCTVDPSICDDIIELICGKHKGAFNDSRMSVMAGHEPGGTSVRNMDHWAQGVRSKTFQMYDYGLVENLVRYKQASPPKYDLGKISPSIPIALFSGGQDVLADPTDVALLIAALPTPPVLAMELPDYAHLDFVWDIQARVEMYPQLLEVLNRYK* # ORIGINAL: g13358.t1 original gene structure, not modified by PASA NODE_858_length_16640_cov_39.1145 AUGUSTUS gene 13374 16160 . + . ID=g13358;Name=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS mRNA 13374 16160 . + . ID=g13358.t1;Parent=g13358;Name=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 13374 13449 . + . ID=g13358.t1.exon1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 13374 13449 . + 0 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 13602 13767 . + . ID=g13358.t1.exon2;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 13602 13767 . + 2 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 13957 14395 . + . ID=g13358.t1.exon3;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 13957 14395 . + 1 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 14530 14656 . + . ID=g13358.t1.exon4;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 14530 14656 . + 0 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 14786 15040 . + . ID=g13358.t1.exon5;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 14786 15040 . + 2 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 15291 15539 . + . ID=g13358.t1.exon6;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 15291 15539 . + 2 ID=cds.g13358.t1;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS exon 15979 16160 . + . ID=g13358.t1.exon7;Parent=g13358.t1 NODE_858_length_16640_cov_39.1145 AUGUSTUS CDS 15979 16160 . + 2 ID=cds.g13358.t1;Parent=g13358.t1 #PROT g13358.t1 g13358 MAWSPLPLGTLLAVVVVLAGVVGCRGGEVYQSASLVAYDNYYVNGNAMPFEVPELTASLQLVFTMYRGSSIPAPCSLPPVLLFRRNGIPIPSFVLANYTDLTVQMPAVSTYAITLPSPQAGSWVVYAYVLATSSPVCSLAMSATPLSGPVPTDISTQAVFGHVNGTKPKALPTQYAVAPLSASTSFLQVQVDKTACVAPVGCDLTIAVRASGYATPTASDVSVGCPAANTTCVLLLANPIVNQPYFAAVFQSAAANMTAAAFNISTSSLACTNGGYGVQCIRARGVERADSQVALLSSTFRTQAITTSAPTLLELHIPETLRGATLVASLSSAGTLAAPVTITFRVDAVPLPGDVTVDQVGATLSKSSKIEVSFPRAGLMYVLISSAATSSVSFSMSSVACPSGCGGNGDCRAMTIQSLTYGYCSCNRPHVGWACNLRDPSWGNFIRALLLTVLSNIFFIPVIVVSFYYGIVVEALIYTYVLFASSVSPDASTAVLP* # PASA_UPDATE: g13353.t1, single gene model update, valid-1, status:[pasa:asmbl_9698,status:12], valid-1 NODE_858_length_16640_cov_39.1145 . gene 362 2878 . + . ID=g13353;Name=g13353.t1 NODE_858_length_16640_cov_39.1145 . mRNA 362 2878 . + . ID=g13353.t1;Parent=g13353;Name=g13353.t1 NODE_858_length_16640_cov_39.1145 . five_prime_UTR 362 363 . + . ID=g13353.t1.utr5p1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . exon 362 454 . + . ID=g13353.t1.exon1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 364 454 . + 0 ID=cds.g13353.t1;Parent=g13353.t1;5_prime_partial=true NODE_858_length_16640_cov_39.1145 . exon 650 886 . + . ID=g13353.t1.exon2;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 650 886 . + 2 ID=cds.g13353.t1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . exon 1268 1704 . + . ID=g13353.t1.exon3;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 1268 1704 . + 2 ID=cds.g13353.t1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . exon 2052 2099 . + . ID=g13353.t1.exon4;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 2052 2099 . + 0 ID=cds.g13353.t1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . exon 2279 2440 . + . ID=g13353.t1.exon5;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 2279 2440 . + 0 ID=cds.g13353.t1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . exon 2617 2878 . + . ID=g13353.t1.exon6;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . CDS 2617 2688 . + 0 ID=cds.g13353.t1;Parent=g13353.t1 NODE_858_length_16640_cov_39.1145 . three_prime_UTR 2689 2878 . + . ID=g13353.t1.utr3p1;Parent=g13353.t1 #PROT g13353.t1 g13353 KGKLFGQQLELVAPDGLPTNLVNLMSYITARADAEGLFRVAGAASRVEALRTLIDTCDDVSLEDDAKLRESISSGITVHDAATVLKRFFRDLPEPLLMGRLHEYFYATACSARDDQSKLTALSILVCKFLPESRVAALRQLLAFLHNCASHGGKSLMDADNLAKVWAPNLLHTDAGIGPLPGVPSCPSTPVRASSAPMPMGYGNPSTPAGNGYAHVPLTPGGSNGASDGVDYAEKDKKVAQLVQLMIERHEEVFKIPSALEQEAESIRKGQVRTITTGLRARQVDADTFEREAEETTRRELIKLVAGIRGNAKLSEKQKKDMMHALVSVHPFLKGCIDGDNKENALAN* # ORIGINAL: g40.t1 original gene structure, not modified by PASA NODE_834_length_17176_cov_39.0601 AUGUSTUS gene 1624 7815 . + . ID=g40;Name=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS mRNA 1624 7815 . + . ID=g40.t1;Parent=g40;Name=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 1624 2666 . + . ID=g40.t1.exon1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 1624 2666 . + 0 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 2928 3050 . + . ID=g40.t1.exon2;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 2928 3050 . + 1 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 3245 4501 . + . ID=g40.t1.exon3;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 3245 4501 . + 1 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 4755 4858 . + . ID=g40.t1.exon4;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 4755 4858 . + 1 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 5169 5798 . + . ID=g40.t1.exon5;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 5169 5798 . + 2 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 5931 6166 . + . ID=g40.t1.exon6;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 5931 6166 . + 2 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 6375 6736 . + . ID=g40.t1.exon7;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 6375 6736 . + 0 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 6914 7503 . + . ID=g40.t1.exon8;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 6914 7503 . + 1 ID=cds.g40.t1;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 7673 7815 . + . ID=g40.t1.exon9;Parent=g40.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 7673 7815 . + 2 ID=cds.g40.t1;Parent=g40.t1 #PROT g40.t1 g40 MAGKPTDSVLLSFAVQCMLLCVAVTPHGAVGDIVFGQSCALTGAIADLGTEMRDGIRAAFKEINSFGGIRGQNLSLITYDDVYDPTRAYNNTKRLLEVDNVFALIGPVGTATATTVLPLVNQHSVPFIGAYTGTVDLRTPHNSLLLNIRASYVDEATAMVDYLVNKKLLTRISVFFQDDGFGLSGYNGAKAALAKMGLPIESEGRYTRSTVNVQQGLDDIVTNGRPQAILLMSVYAPAAEFIRRAKQDSRLQNADSVIFMTVSAVGSNSLRTALNGITENILIMEVVPHPFLDRDGHASYSGGAFKLVENFNAAMAAHNASLVPSHVSLEGYLAGRFVAAAIERIPTRTQLTRQSFLDAVYLSSMFIIDGQLLGPFRELSAFCPFRVCKCNQGMKELWAVKMNATTKEFILVDDAKFNFYDTCFSDPTALKSPIVFGASLPMSLPDTLATDSSTRRMWTTTMSPLNASAADDVGTQIARSAVLGIADAFASINAQGGVHGHLLHFKAIDDKGSLPSLDANIRALLIDERVFGFALPVGTTASTHTQGVITQVTSEPASVASMSRGRTMPSIFPIVAPMTAELSQRETFTKSKIFLQASHADEARAIIDYAVNTLGAQSISVLYQTSMGWQSGVADATGYIREAAVDGSSIYGAVTSALGHYGIKAERTGAFTTVNDLDDALGRILFRSSHPDAVYVIAEEDELARAISQLRAHDQTARSPILLGSYAKHTVLNNPDSIPNIDGLYVADGEFVLANYSAPASSPRSARVEAAQAYTAGFAAGKFIAATLGNIFVSEPTSDAFVESVFAGLAVSIPDVATFGRLNANPCDSSSSAASCKCNQAAGVVDIFEVVASGSRRTLASATSNFHFTTCGVRNNPFVSPYSNKCDVLDATSFTFGDDYSSAETINRAGVAYTVVIIVLVLVLAVISAVYTMTRSALKSLAKRSTIILIRRSLSNYVHLGTIVVEAFQLTSIVLAADLGWTSMKGFIHAMEYIGLEFAFSWYWYVIMVLSGLWILYAILIWTGVTEKIREWEHGHVLLLPMTHFLPLMGTLGYIPTLITLMRSFSCAYTDNGESYLEAECSISCWTSEAWSLSVLGAIFLLMFVPIAIITAFFWAEMQDKLDVKYRGGFEVMDYVAKLVMCVLRIFFVRFTTTYLSLLLAINTAMSLFVLIRRPSLVVWVDYVKAASYAVSMWAAIVGLASSLTDSDHATWPEASVFAGWAFIILFTIIFIRIKYPQIRVRPTQVVHGRDRIRKIARLFQSLKKAGSRMLSQGKSKNGLGSQVSCNSSSTAGAHSLLSEEEWTTLESGIGLWKANGQLRPSDCDMLVKFVWARDEMICVLFERSQKNLTQLLTLLQKPVLQMMADEYAASWGIRKTSSFKGPGVAGETLRLPSSSGAEKRRSLSIGSSSARVLAMVPHSPQAGADTQPVFLNGQALPMSVESDPPQTIVVEVPVLFGEFPEKAAPSEPYVQQVDVPPATDQGADNRMRTENAPK* # PASA_UPDATE: g41.t1, single gene model update, valid-1, status:[pasa:asmbl_9604,status:12],[pasa:asmbl_9605,status:12], valid-1 NODE_834_length_17176_cov_39.0601 . gene 8306 13471 . + . ID=g41;Name=g41.t1 NODE_834_length_17176_cov_39.0601 . mRNA 8306 13471 . + . ID=g41.t1;Parent=g41;Name=g41.t1 NODE_834_length_17176_cov_39.0601 . five_prime_UTR 8306 8342 . + . ID=g41.t1.utr5p1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 8306 8615 . + . ID=g41.t1.exon1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 8343 8615 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 8773 8832 . + . ID=g41.t1.exon2;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 8773 8832 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 9037 9174 . + . ID=g41.t1.exon3;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 9037 9174 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 9577 9712 . + . ID=g41.t1.exon4;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 9577 9712 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 10072 10182 . + . ID=g41.t1.exon5;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 10072 10182 . + 2 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 10405 10601 . + . ID=g41.t1.exon6;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 10405 10601 . + 2 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 10767 10882 . + . ID=g41.t1.exon7;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 10767 10882 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 11104 11242 . + . ID=g41.t1.exon8;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 11104 11242 . + 1 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 11575 11718 . + . ID=g41.t1.exon9;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 11575 11718 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 11938 11983 . + . ID=g41.t1.exon10;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 11938 11983 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 12320 12474 . + . ID=g41.t1.exon11;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 12320 12474 . + 2 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 12692 12853 . + . ID=g41.t1.exon12;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 12692 12853 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 13015 13112 . + . ID=g41.t1.exon13;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 13015 13112 . + 0 ID=cds.g41.t1;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . exon 13342 13471 . + . ID=g41.t1.exon14;Parent=g41.t1 NODE_834_length_17176_cov_39.0601 . CDS 13342 13471 . + 1 ID=cds.g41.t1;Parent=g41.t1 #PROT g41.t1 g41 MDRSATHKPVKRRADTESVDASDVSDATAQLKRRRKDADDKGSAVDEKQKESSDDETAGDASQDGSSGKVLDKTERRRQKKERKKLAKMAQASDTSLTTDGGALHNVYGANGRADVELKTKEYFSKAGCSHIKLKDVQDLVLWVAADGVNPRWVFVKNKPLIPCTVVVGLPGLDTTAYTSFAHLMPTMMRLFSEAVPTRCPGGDYRVDSHVHALLHSPLSKQAAKDVRKSRDAGKSGAPVEGMAVTALLVSAAEMHAQGYPSDVDVDKGYVRFGDLHLRAANGGGKDGKAVTRRPGTLFAIDCEMCRTSVGLELARISVVDEDLQTVYDTFVLPPNPILDYNTRFSGITASQMANVKTTLADVQTALAQLLPPDAIIIGHSLENDLRVLQLVHNRVIDTALSFSHVRGHPYKPALRWLSEKFLERAIQGGDEGHCSIEDALACMELVKLKMKNGPSFGVIVQETEPIYERISRLGKTSGLVDGAQVVRQYLSGCADGRIVSSDDEALKHAVEMLKAGGEKQKPRAEFIFTQFYEIDSLPHLSVVGVDEPGRESWAQAIKSTDARIAQLYAHMPTNGLLIVVTGRGNVSEVKRIQADKTVRARAGTWSTNDDETLERAVGLARNGLSFFRVKKEG* # ORIGINAL: g42.t1 original gene structure, not modified by PASA NODE_834_length_17176_cov_39.0601 AUGUSTUS gene 14345 15072 . + . ID=g42;Name=g42.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS mRNA 14345 15072 . + . ID=g42.t1;Parent=g42;Name=g42.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 14345 14406 . + . ID=g42.t1.exon1;Parent=g42.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 14345 14406 . + 0 ID=cds.g42.t1;Parent=g42.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS exon 14883 15072 . + . ID=g42.t1.exon2;Parent=g42.t1 NODE_834_length_17176_cov_39.0601 AUGUSTUS CDS 14883 15072 . + 1 ID=cds.g42.t1;Parent=g42.t1 #PROT g42.t1 g42 MPNPNQIYYSDRYSDDKYTYRHVILPANVAKLIPRDRLLSESEWRDFGINQSPGWVHYMVHKPEPHILLFRRDLSPERPGIKQ* # ORIGINAL: g14070.t1 original gene structure, not modified by PASA NODE_6231_length_611_cov_37.416 AUGUSTUS gene 103 479 . - . ID=g14070;Name=g14070.t1 NODE_6231_length_611_cov_37.416 AUGUSTUS mRNA 103 479 . - . ID=g14070.t1;Parent=g14070;Name=g14070.t1 NODE_6231_length_611_cov_37.416 AUGUSTUS exon 469 479 . - . ID=g14070.t1.exon1;Parent=g14070.t1 NODE_6231_length_611_cov_37.416 AUGUSTUS CDS 469 479 . - 0 ID=cds.g14070.t1;Parent=g14070.t1 NODE_6231_length_611_cov_37.416 AUGUSTUS exon 103 293 . - . ID=g14070.t1.exon2;Parent=g14070.t1 NODE_6231_length_611_cov_37.416 AUGUSTUS CDS 103 293 . - 1 ID=cds.g14070.t1;Parent=g14070.t1 #PROT g14070.t1 g14070 MAQCLPTNTELTSKNCSLGIVGPGHPFTIYDDDKLAPFLEGLEGGTRGTAAPEAAAEPAQPQSMETD # PASA_UPDATE: g6409.t1, single gene model update, valid-1, status:[pasa:asmbl_3632,status:12], valid-1 NODE_2152_length_7493_cov_40.6256 . gene 144 3588 . - . ID=g6409;Name=g6409.t1 NODE_2152_length_7493_cov_40.6256 . mRNA 144 3588 . - . ID=g6409.t1;Parent=g6409;Name=g6409.t1 NODE_2152_length_7493_cov_40.6256 . exon 719 3588 . - . ID=g6409.t1.exon1;Parent=g6409.t1 NODE_2152_length_7493_cov_40.6256 . CDS 719 3588 . - 0 ID=cds.g6409.t1;Parent=g6409.t1 NODE_2152_length_7493_cov_40.6256 . exon 144 305 . - . ID=g6409.t1.exon2;Parent=g6409.t1 NODE_2152_length_7493_cov_40.6256 . CDS 144 305 . - 1 ID=cds.g6409.t1;Parent=g6409.t1;3_prime_partial=true #PROT g6409.t1 g6409 MWELSILRVATTLLLVGCVLYVLSWLVGPIISFVARKKGLSLSIERIGFLELQGVAFHLPASGLTVRLRRLGVDWRMPSTAHGGTDAIATVRLTGLHIGVDTRESQLRVDKVRPTASTVANGKKAGSTSLVKKALFRIARRYLHTVALNVDDVAVSATTSLAKAAEREESACVRFELTRPFRIDSSWIGGRDAHSLCVITLDGAMISVERHDGDSVALFNGGCKGSFTLAKHRVGCSLEIGPVTSHIKLAPLIRIGALLAARASSAKKSTAASPKQPLPAHPMTLTSGRPGESASRSIASTLGTLFRVLPSRASVSVREVTATIEGADDIPTASQRVLDARVASATLEVTCGGTVAAGDGATADLEALDVIELMGEAANLSLTLTSPPSPLSNPVPSLPSVSNALASLGRSRITVSLIGGAPRGRDGDDVALAADVSGGTERRGDRAPRQLSAAALVANGAIALDAHCEAWLRSAIRCGMRDLPPRVDTVVSTETHTFVESATPHAAVVEEASLADVGVVYATSTSGSLVRWPDLLDFPVSVSADLSMGSVVLSPGFMGLSGCYVAAEQLSLGAQSHDGDTHQLSPCATVRGRNAGVCLGSGDGPVEPFANPPSSGRHVWGRTLSIALVTLRCGLPVNLSTYELQSPNIDVSIECIAADYSSRCASFVKEAIHLAASLGNRKHQLQTASAASTRTIRPPAKSTPSRAASALMRPNVKVSLDGLSAYITQGAGRDYAMVRLDGLTFDGKSTGAADVTVSGFAVAVPEKMPADTSTLHARFNAVESLLLGVESLAVTVAADALAVSAGVETVVIPGQVTVSGGVVSIDWDMGMHVALVELGKGIASTLPPRRTSTPEVETRPSSPPHAEPTPTDVRKRPVSLALKSLSATLRQLDEIELTVQLDGVSGRLNETPTAVPTLHVDAGSLVVNSHVILDAQHLRVRVDSKEALAEDVKPFSDEDESYAPLVGGSPIVLDVHAQSIRFVLPDKFDFGYYIDDVITITKALKLMHSK # ORIGINAL: g6410.t1 original gene structure, not modified by PASA NODE_2152_length_7493_cov_40.6256 AUGUSTUS gene 4165 6587 . - . ID=g6410;Name=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS mRNA 4165 6587 . - . ID=g6410.t1;Parent=g6410;Name=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 6567 6587 . - . ID=g6410.t1.exon1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 6567 6587 . - 0 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 6290 6369 . - . ID=g6410.t1.exon2;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 6290 6369 . - 0 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 6016 6120 . - . ID=g6410.t1.exon3;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 6016 6120 . - 1 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 5566 5674 . - . ID=g6410.t1.exon4;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 5566 5674 . - 1 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 5252 5327 . - . ID=g6410.t1.exon5;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 5252 5327 . - 0 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 4804 4998 . - . ID=g6410.t1.exon6;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 4804 4998 . - 2 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 4459 4613 . - . ID=g6410.t1.exon7;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 4459 4613 . - 2 ID=cds.g6410.t1;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS exon 4165 4335 . - . ID=g6410.t1.exon8;Parent=g6410.t1 NODE_2152_length_7493_cov_40.6256 AUGUSTUS CDS 4165 4335 . - 0 ID=cds.g6410.t1;Parent=g6410.t1 #PROT g6410.t1 g6410 MGIEWSQVRLACAALPSLEDLHVVKNGIVSLWATGAATDVFPSLKLLNLEDNEIASWDEIAAAGTQMPKLERVLLNGNRIPSIRATPGQLTSLVTLSINRNKLENWTSINELALLPKLSELRFKENPVTEASDAYVVRTEMIARMKGLSHLNGSAVSANERMVAEREYVKRHSQQRTKLGAAFATQHPRYDELAEVHGMVGLAQDGPDSAESIGATALKDRLVAVRILLPNGQDQMKKLPPTMTVQKVKALLQRPSGVDASRQRLSLLTRSEDGSEVSVAMDDDMRTLSFYSVLPNDTIVVGE* # ORIGINAL: g2820.t1 original gene structure, not modified by PASA NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS gene 4 408 . - . ID=g2820;Name=g2820.t1 NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS mRNA 4 408 . - . ID=g2820.t1;Parent=g2820;Name=g2820.t1 NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS exon 255 408 . - . ID=g2820.t1.exon1;Parent=g2820.t1 NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS CDS 255 408 . - 1 ID=cds.g2820.t1;Parent=g2820.t1 NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS exon 4 105 . - . ID=g2820.t1.exon2;Parent=g2820.t1 NODE_7779_length_408_cov_14.4204_potentialcontaminant AUGUSTUS CDS 4 105 . - 0 ID=cds.g2820.t1;Parent=g2820.t1 #PROT g2820.t1 g2820 DGVHYVLVRSIGYKQLPETDKYIRGKIAASGFMVLPDKNSPNKCFVTFLSQIDMRLPNFETKMHRREVAKTSVLNALQKHILSH* # PASA_UPDATE: g1132.t1, single gene model update, valid-1, status:[pasa:asmbl_4150,status:12], valid-1 NODE_2368_length_6530_cov_45.3637 . gene 340 2315 . + . ID=g1132;Name=g1132.t1 NODE_2368_length_6530_cov_45.3637 . mRNA 340 2315 . + . ID=g1132.t1;Parent=g1132;Name=g1132.t1 NODE_2368_length_6530_cov_45.3637 . five_prime_UTR 340 418 . + . ID=g1132.t1.utr5p1;Parent=g1132.t1 NODE_2368_length_6530_cov_45.3637 . exon 340 2315 . + . ID=g1132.t1.exon1;Parent=g1132.t1 NODE_2368_length_6530_cov_45.3637 . CDS 419 2164 . + 0 ID=cds.g1132.t1;Parent=g1132.t1 NODE_2368_length_6530_cov_45.3637 . three_prime_UTR 2165 2315 . + . ID=g1132.t1.utr3p1;Parent=g1132.t1 #PROT g1132.t1 g1132 MYQLTGAQKAAVVAGAVVAAAGIAYYVSRSGARGSGSAGGSAAGSGKKGAKGQSAKKKGDGAAPPAPSTAAAVAVPAVTARRVAPEERSLEAANNVKNEGNKLFGKGKHDEAAALYTEAILLCPEGEAECAKFYANRAACYARVSRHEDVIADCTAAVNIDAKYAKAWQRRAQAYEDVGRLDEALDDLGVYSSLVGPEDPAAQAAITRVLERIGANKAKVAVTTKRGRFPPVSVVKAYLTSLRCFPHEGETAAASEGDAAAHYQAGLDHLTAGKYVEALAAFESCCRAEASHPDALLHLGTLLHLVGDHDRALEVLGRAASVPSARTGALVRTANLLFLQGKIPEAIAMFEEVLKEDPRSVVARFHAAQAYQHQAQMDVAVSHYDSILGDVPGDYEALSQKGLACFQVGLVFAQQPMGMEAAAALFHQAVESLKEATKTQPGRPEAHVHYASVLQTIGQMDEALAEYDAAIAADPTSAAAYTAKGQLVFQVTGNAAAALELHAKALEVDPDSIETRCNLAMQNLQTGNFEGAIEEYDKAIELGFVEQDLATIFAFREAAVSRLKSAQRAAAAAAAVADSEQ* # ORIGINAL: g1135.t1 original gene structure, not modified by PASA NODE_2368_length_6530_cov_45.3637 AUGUSTUS gene 5988 6221 . + . ID=g1135;Name=g1135.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS mRNA 5988 6221 . + . ID=g1135.t1;Parent=g1135;Name=g1135.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS exon 5988 6221 . + . ID=g1135.t1.exon1;Parent=g1135.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS CDS 5988 6221 . + 0 ID=cds.g1135.t1;Parent=g1135.t1 #PROT g1135.t1 g1135 MAEAVGGAAAGGDDGSNRFMGQKERRRSSAVKMFLGDHLGLASNVNVVKLLAKNGVFIGLLHWVVGWWKGSSAPSRT* # PASA_UPDATE: g1133.t1, single gene model update, valid-1, status:[pasa:asmbl_4149,status:3], valid-1 NODE_2368_length_6530_cov_45.3637 . gene 2327 3678 . + . ID=g1133;Name=g1133.t1 NODE_2368_length_6530_cov_45.3637 . mRNA 2327 3678 . + . ID=g1133.t1;Parent=g1133;Name=g1133.t1 NODE_2368_length_6530_cov_45.3637 . five_prime_UTR 2327 2426 . + . ID=g1133.t1.utr5p1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 2327 2454 . + . ID=g1133.t1.exon1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 2427 2454 . + 0 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 2667 2782 . + . ID=g1133.t1.exon2;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 2667 2782 . + 2 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 2922 2960 . + . ID=g1133.t1.exon3;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 2922 2960 . + 0 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 3045 3271 . + . ID=g1133.t1.exon4;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 3045 3271 . + 0 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 3361 3515 . + . ID=g1133.t1.exon5;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 3361 3515 . + 1 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . exon 3607 3678 . + . ID=g1133.t1.exon6;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . CDS 3607 3629 . + 2 ID=cds.g1133.t1;Parent=g1133.t1 NODE_2368_length_6530_cov_45.3637 . three_prime_UTR 3630 3678 . + . ID=g1133.t1.utr3p1;Parent=g1133.t1 #PROT g1133.t1 g1133 MPPKGKVKEPYGRKPQHKGRQRHFTSGLGDEGLSLEEQERQQKQQEWRRKKGEDSEDEDEEEGSDEDDSDEDDSDEKEETEKGEGAEADGEEKQIKPKGVQSLIETENPNRLNKAGIVKKADAVNVDVKPELSRREREEIEKEQARRRYEELHRQGKTEQAQADLARLALIRKQREDAAKKRADVASKGAVPKGK* # ORIGINAL: g1134.t1 original gene structure, not modified by PASA NODE_2368_length_6530_cov_45.3637 AUGUSTUS gene 4593 5408 . - . ID=g1134;Name=g1134.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS mRNA 4593 5408 . - . ID=g1134.t1;Parent=g1134;Name=g1134.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS exon 5281 5408 . - . ID=g1134.t1.exon1;Parent=g1134.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS CDS 5281 5408 . - 0 ID=cds.g1134.t1;Parent=g1134.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS exon 4593 4854 . - . ID=g1134.t1.exon2;Parent=g1134.t1 NODE_2368_length_6530_cov_45.3637 AUGUSTUS CDS 4593 4854 . - 1 ID=cds.g1134.t1;Parent=g1134.t1 #PROT g1134.t1 g1134 MADNEGQFKAQISSPLREDAAAEPSMDATRDTQQVKEEARCSRTVGYWSAYEAAHHGAHTRTPTAWNHLLEHNKCRSVYHRFKSSGGDVSPKALKVSFSLSVKISLALPFSLSLSVAWTWGQFAPAEES* # ORIGINAL: g3049.t1 original gene structure, not modified by PASA NODE_6277_length_601_cov_157.359_potentialcontaminant AUGUSTUS gene 1 503 . - . ID=g3049;Name=g3049.t1 NODE_6277_length_601_cov_157.359_potentialcontaminant AUGUSTUS mRNA 1 503 . - . ID=g3049.t1;Parent=g3049;Name=g3049.t1 NODE_6277_length_601_cov_157.359_potentialcontaminant AUGUSTUS exon 1 503 . - . ID=g3049.t1.exon1;Parent=g3049.t1 NODE_6277_length_601_cov_157.359_potentialcontaminant AUGUSTUS CDS 1 503 . - 0 ID=cds.g3049.t1;Parent=g3049.t1 #PROT g3049.t1 g3049 MVLGLFGICRMPEKLDFQVKTSKLSQVSNGIDALLQQDCIFNKETLDELGKVEFPESITPSGYVHVLSAVAGMRQFYFKKPEEGGRKEANYHGRLVSVVIGALLRALGTADSDTSNLLYEIEYDVSRIRGRKSQNRYSEVVIGDVPWFFCEIAKGVEADGGHKDRWR # PASA_UPDATE: g4332.t1, single gene model update, valid-1, status:[pasa:asmbl_5578,status:12], valid-1 NODE_3110_length_4280_cov_38.9527 . gene 585 4265 . + . ID=g4332;Name=g4332.t1 NODE_3110_length_4280_cov_38.9527 . mRNA 585 4265 . + . ID=g4332.t1;Parent=g4332;Name=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 585 1073 . + . ID=g4332.t1.exon1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 585 1073 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 1321 1659 . + . ID=g4332.t1.exon2;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 1321 1659 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 1895 2146 . + . ID=g4332.t1.exon3;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 1895 2146 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 2444 2689 . + . ID=g4332.t1.exon4;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 2444 2689 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 2850 3006 . + . ID=g4332.t1.exon5;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 2850 3006 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 3327 3538 . + . ID=g4332.t1.exon6;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 3327 3538 . + 2 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 3676 3810 . + . ID=g4332.t1.exon7;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 3676 3810 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . exon 4090 4265 . + . ID=g4332.t1.exon8;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . CDS 4090 4197 . + 0 ID=cds.g4332.t1;Parent=g4332.t1 NODE_3110_length_4280_cov_38.9527 . three_prime_UTR 4198 4265 . + . ID=g4332.t1.utr3p1;Parent=g4332.t1 #PROT g4332.t1 g4332 MSTGHSRIHLVGSPDPDVPSCGSDAGDAPSRSHPISPHRDSVTVEYDDSSLGSASQHRSLAIETDALEEESRGIELLSLYSPREQPYVARESGDDSGSVPLLDVFHDAGAVLPDPPVTPVTMRLSAREGIEVQSSSHPTPERVGKDYAHVVPLAKECADDSKKTSTLHKATSCTDTASGAISHTQPHINDVGRMAGSVASAFLQSPLAKQAHTHVHAHAHHLPGRNRSVLSFRAIGDDTDSSVPDVTAQDVLDYINKFKTGERKHVHDPVLDSEVEAQQGMRTGAESARLHRSSSIVSASTSTLCQKKCTILTDSQTFHEFNDLSELMGERGAEVLGKTRGTFWLDMYEPNAADMEFMEQVFGMHPLTIEDILTETTREKMEIYEQYIFFNLRSFSLSESSYDTEDVVESVYIAIYVNFVLSFHVRPSQQLPRIVRRVRAAKTLRPDWVLYTLLDEIVDSCVPIVEVAEAEVESINDLVLLLSGSEQSDMLRRIGNARKRLSDLHRRLHPKREMLAAMTTRAHKCLNPNTQLYLRDVLDHVLGMLLQIETSRETLNTSQSNYLAKVSIELADHSNNMSRVMKTLTIAATILMPLTLISGVFGMNVIVPGQVGDHGDSLGPFFGITGSMLCIALFLLFLFKRSGYI* # PASA_UPDATE: g7546.t1, single gene model update, valid-1, status:[pasa:asmbl_9674,status:3], valid-1 NODE_850_length_16823_cov_46.6096 . gene 1541 5183 . - . ID=g7546;Name=g7546.t1 NODE_850_length_16823_cov_46.6096 . mRNA 1541 5183 . - . ID=g7546.t1;Parent=g7546;Name=g7546.t1 NODE_850_length_16823_cov_46.6096 . five_prime_UTR 5116 5183 . - . ID=g7546.t1.utr5p1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 4946 5183 . - . ID=g7546.t1.exon1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 4946 5115 . - 0 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 4379 4515 . - . ID=g7546.t1.exon2;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 4379 4515 . - 1 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 4095 4168 . - . ID=g7546.t1.exon3;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 4095 4168 . - 2 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 3815 3940 . - . ID=g7546.t1.exon4;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 3815 3940 . - 0 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 3472 3519 . - . ID=g7546.t1.exon5;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 3472 3519 . - 0 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 3260 3332 . - . ID=g7546.t1.exon6;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 3260 3332 . - 0 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 2658 2821 . - . ID=g7546.t1.exon7;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 2658 2821 . - 2 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 2134 2311 . - . ID=g7546.t1.exon8;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 2134 2311 . - 0 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 1785 1886 . - . ID=g7546.t1.exon9;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 1785 1886 . - 2 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . exon 1541 1690 . - . ID=g7546.t1.exon10;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . CDS 1653 1690 . - 2 ID=cds.g7546.t1;Parent=g7546.t1 NODE_850_length_16823_cov_46.6096 . three_prime_UTR 1541 1652 . - . ID=g7546.t1.utr3p1;Parent=g7546.t1 #PROT g7546.t1 g7546 MLRASLSVLAQTCIVTTERLLPAVQCQTLTQTRLLSQRRLPIVSRAMATMKAVSFSRTGPPSVLEYKDLPVPELADSNVLIKNAVVGVNYIDCYHRTGLYSVPLPYIPGREGAGTVVAVGKDVTQVKAGDRVTYFGPGAYAEMTSVPIARVAALPDAVSFEQACTSMVQGLTAQYLVNDSYAIKKGDTVLVHACAGGVGLILTQYAKLKGARVIGTCSTPEKATLAYAAGADNVILYTQQDFVAEVLRLTEEKGVQAVYDSVGLTTFEGSFKCLAVRGTIAIFGQSSGKVPPLELLTLAKGSYFLTRPVLDHFIPSRDEFVKRASEFFSLVESGQMKITVGKAFALADAAEAHTALEGRATVGKVLLKP* # PASA_UPDATE: g7549.t1, single gene model update, valid-1, status:[pasa:asmbl_9676,status:3], valid-1 NODE_850_length_16823_cov_46.6096 . gene 12337 15165 . - . ID=g7549;Name=g7549.t1 NODE_850_length_16823_cov_46.6096 . mRNA 12337 15165 . - . ID=g7549.t1;Parent=g7549;Name=g7549.t1 NODE_850_length_16823_cov_46.6096 . five_prime_UTR 15111 15165 . - . ID=g7549.t1.utr5p1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 15016 15165 . - . ID=g7549.t1.exon1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 15016 15110 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 14707 14839 . - . ID=g7549.t1.exon2;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 14707 14839 . - 1 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 14331 14540 . - . ID=g7549.t1.exon3;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 14331 14540 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 13980 14114 . - . ID=g7549.t1.exon4;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 13980 14114 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 13663 13800 . - . ID=g7549.t1.exon5;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 13663 13800 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 13252 13374 . - . ID=g7549.t1.exon6;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 13252 13374 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 12954 13014 . - . ID=g7549.t1.exon7;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 12954 13014 . - 0 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . exon 12337 12716 . - . ID=g7549.t1.exon8;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . CDS 12568 12716 . - 2 ID=cds.g7549.t1;Parent=g7549.t1 NODE_850_length_16823_cov_46.6096 . three_prime_UTR 12337 12567 . - . ID=g7549.t1.utr3p1;Parent=g7549.t1 #PROT g7549.t1 g7549 MAQSTVSEGILYGMGNPLLDISAHVDTEFLKNYDLVANNAILAEEKHRPLYEHLRNGYKVEYIAGGATQNSIRVAQWMLQVPNATTYIGCIGNDEYGKIIRECAESDGVVTSYYVQDAIPTGTCACLITGKDRSLVAYLGAANAYKIEHLSHPDNWALVEKAQYYYIAGFFLTVSPDSIIKVAEHAAERNKMFCMNLSAPFICQFFQEPQLLALPYIDILFGNETEAREFAKKNNIDSEDVATIALAVAALPKVNKNRDRMVVFTQGAEPTIVAHKGEVQTFAVIPVAAEEIVDTNGAGDAFVGGFLSQLALNKSVAQCVSAGNYAASTIIKRSGCTYPAIPEFKSE* # ORIGINAL: g7547.t1 original gene structure, not modified by PASA NODE_850_length_16823_cov_46.6096 AUGUSTUS gene 5689 6963 . - . ID=g7547;Name=g7547.t1 NODE_850_length_16823_cov_46.6096 AUGUSTUS mRNA 5689 6963 . - . ID=g7547.t1;Parent=g7547;Name=g7547.t1 NODE_850_length_16823_cov_46.6096 AUGUSTUS exon 5689 6963 . - . ID=g7547.t1.exon1;Parent=g7547.t1 NODE_850_length_16823_cov_46.6096 AUGUSTUS CDS 5689 6963 . - 0 ID=cds.g7547.t1;Parent=g7547.t1 #PROT g7547.t1 g7547 MIPEIAESVPEKRSPLSVTMQPKKMPHAFDSAMPGDLIPSGKLTHSSCSLARIRSQENVASPMMPLRSGEVARPRFIEPLAHDHSIIAATCEDMSSATTTPSPSLSTCIGDAPIRRSSLSPVTAEECMSRVSRQQRHSQLRPTRSLSGDESQRYEIGRMDGIITLPAMSRGSLSTIDLSTSSPACHCDPRAISCTCGVQRRRTHSDSSAPSHRVGSFNEIDRMPTDLLPGALSLPVKQFVSSSRSLIGITESESLGSLCEDSPAEVTTTNNKAHYNGDDADATHSVEVYQLEEGTGRRMSPSLSSSNVGDCGRAFPRRRKISVDETLHYGSSSPFIAVTSTRDSPVHQAGACGGARQGVPVSLPSLSSLHPLCMEPSSISQSRDAIKEVEQRIRRLSLGALTREMSGIGMGLSPHLPYATKKDH* # PASA_UPDATE: g7548.t1, single gene model update, valid-1, status:[pasa:asmbl_9679,status:12],[pasa:asmbl_9682,status:12], valid-1 NODE_850_length_16823_cov_46.6096 . gene 9194 11867 . + . ID=g7548;Name=g7548.t1 NODE_850_length_16823_cov_46.6096 . mRNA 9194 11867 . + . ID=g7548.t1;Parent=g7548;Name=g7548.t1 NODE_850_length_16823_cov_46.6096 . exon 9194 9521 . + . ID=g7548.t1.exon1;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . CDS 9194 9521 . + 0 ID=cds.g7548.t1;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . exon 9760 9843 . + . ID=g7548.t1.exon2;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . CDS 9760 9843 . + 2 ID=cds.g7548.t1;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . exon 10333 10459 . + . ID=g7548.t1.exon3;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . CDS 10333 10459 . + 2 ID=cds.g7548.t1;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . exon 10776 11867 . + . ID=g7548.t1.exon4;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . CDS 10776 10890 . + 1 ID=cds.g7548.t1;Parent=g7548.t1 NODE_850_length_16823_cov_46.6096 . three_prime_UTR 10891 11867 . + . ID=g7548.t1.utr3p1;Parent=g7548.t1 #PROT g7548.t1 g7548 MVRMQDVLKSGDAGCHSPHQFCHRQQLPMSMAASAHRLGGRVHQPATADNWEGLPVHVHSATHTNHTPLTFCEKFGLQAPTIGFIFAFASLFFFALHYSNSVAAHTNNREPLHAGTDKMSIPSRFLTVDFEVFGKVQGVFFRKYTKQAAESNGVVGWCRNTEAGTVQGTIQGPVDKIAAMKLWLAKKGSPKSRIDRCEFKNEKPLDRLGFSLFAVRE* # ORIGINAL: g12245.t1 original gene structure, not modified by PASA NODE_367_length_25778_cov_38.9036 AUGUSTUS gene 2624 8472 . + . ID=g12245;Name=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS mRNA 2624 8472 . + . ID=g12245.t1;Parent=g12245;Name=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 2624 2629 . + . ID=g12245.t1.exon1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 2624 2629 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 3028 3167 . + . ID=g12245.t1.exon2;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 3028 3167 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 3361 3440 . + . ID=g12245.t1.exon3;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 3361 3440 . + 1 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 3742 3899 . + . ID=g12245.t1.exon4;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 3742 3899 . + 2 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 4073 4249 . + . ID=g12245.t1.exon5;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 4073 4249 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 4641 4728 . + . ID=g12245.t1.exon6;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 4641 4728 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 4926 5662 . + . ID=g12245.t1.exon7;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 4926 5662 . + 2 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 5846 6007 . + . ID=g12245.t1.exon8;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 5846 6007 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 6180 6266 . + . ID=g12245.t1.exon9;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 6180 6266 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 6575 6741 . + . ID=g12245.t1.exon10;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 6575 6741 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 6929 7007 . + . ID=g12245.t1.exon11;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 6929 7007 . + 1 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 7676 7774 . + . ID=g12245.t1.exon12;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 7676 7774 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 8127 8199 . + . ID=g12245.t1.exon13;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 8127 8199 . + 0 ID=cds.g12245.t1;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 8339 8472 . + . ID=g12245.t1.exon14;Parent=g12245.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 8339 8472 . + 2 ID=cds.g12245.t1;Parent=g12245.t1 #PROT g12245.t1 g12245 MPVRAEQFIQGLLSDDADIRLRSVRALKNAVIGNTTKKTNFMLLGAIPRLVQLLRLEHDAEMLIQVAAALGSFAHGTDDSIRAIIDNDGIAGLVGTLTHENVRVVEAGLRSLKILLESPLPARDSIFAGEDTIMRLVEFLSSTNDAISVSAGYVIGRCCVHAEHQNVIAFFGGIEGLVGLLTSHNPKAHEASLDALSALTRNNRSTSQRVAVAAIGGTTVVVYLTRLLRDRRPLIRLLAATCLTNIHRSGAEIDAASPLLASPNNAGRWAMSRQSVAPMHPEDTVDPMHALLPALVKLCGDADDSMRARAPHVLAHLIDDNEDLQKAACDADAISVIGAYFSKLPPFVPSCDTSGAPSGASALLQSSAGASSAMDTATAQADRHVTPQELRRVHRRTLLHPPVGLGVSQSASPQSASQSASMLWLSHEEVPKVDPRIADRIREAALAALAALCAKREDSRRQVIEAKTLPYIVACMEHPSVDVRAAACRCARSLSRSVKNLRTSLVDAGASRPLFKLLSDPSLAVQSAASATLCNIVLDFSPVKKVILEQGGLPKLVALTHSTDSTLRLNGVWAVKNLLYQADGATKDATMLELGWDVLLTLMNDPEEDVQEQAITLLRNLVYGGSKALYVVCNIATGREEHKAAIMNSMPILMAIQVAMAHADPAFRVAATWCIINLTWTEDAGAEERVHRLRDLGFVERLVAMTEDTNLEVVERVRTALEQFTRVT* # PASA_UPDATE: g12247.t1, single gene model update, valid-1, status:[pasa:asmbl_6399,status:3], valid-1 NODE_367_length_25778_cov_38.9036 . gene 12859 18793 . + . ID=g12247;Name=g12247.t1 NODE_367_length_25778_cov_38.9036 . mRNA 12859 18793 . + . ID=g12247.t1;Parent=g12247;Name=g12247.t1 NODE_367_length_25778_cov_38.9036 . five_prime_UTR 12859 13320 . + . ID=g12247.t1.utr5p1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 12859 13409 . + . ID=g12247.t1.exon1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 13321 13409 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 13671 13762 . + . ID=g12247.t1.exon2;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 13671 13762 . + 1 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 14079 14314 . + . ID=g12247.t1.exon3;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 14079 14314 . + 2 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 14711 14943 . + . ID=g12247.t1.exon4;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 14711 14943 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 15301 15419 . + . ID=g12247.t1.exon5;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 15301 15419 . + 1 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 15592 15697 . + . ID=g12247.t1.exon6;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 15592 15697 . + 2 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 15964 16069 . + . ID=g12247.t1.exon7;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 15964 16069 . + 1 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 16630 16744 . + . ID=g12247.t1.exon8;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 16630 16744 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 17073 17140 . + . ID=g12247.t1.exon9;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 17073 17140 . + 2 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 17392 17449 . + . ID=g12247.t1.exon10;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 17392 17449 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 17753 17997 . + . ID=g12247.t1.exon11;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 17753 17997 . + 2 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 18299 18355 . + . ID=g12247.t1.exon12;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 18299 18355 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . exon 18578 18793 . + . ID=g12247.t1.exon13;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . CDS 18578 18778 . + 0 ID=cds.g12247.t1;Parent=g12247.t1 NODE_367_length_25778_cov_38.9036 . three_prime_UTR 18779 18793 . + . ID=g12247.t1.utr3p1;Parent=g12247.t1 #PROT g12247.t1 g12247 MTSPQPMPPSRTPHGSHVGPQSPISKFIERRGSEGAGGGLRIGHYMLGETLGVGSFGKVKLAVHQLTKHKVAVKILNRQKIKSLDMVGKIRREIQNLKLFRHPHIIKLYEVINTPTDIFMVMEYVSGGELFDYIVKNGKLSEFEARKFFQQIISGVDYCHRHMVVHRDLKPENLLLDSNLNVKIADFGLSNMMTDGDFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGKLPFDDEYIPNLFRKIKGGIFALPPHLSEDAKDLLLSMLQVDPLKRITIKQIREHAWFDVDVPSYLFPKPEDECVDVNDDNAIAEVCGKLGVEREEVVRALDSDDPYDQLKVAYHLVQDNRRILEQADEVDNQSLSEFIMATSPPAWNEQMHMEGVMSPPRPTVKTKDVFSIARPSPRSIRANVSGLSMGHTHANANANANANGSVASGGAQATPVNRKKRSRWHLGIRSRNSPHDVMAEVYRALVSLDYEWKAINPYHIRCRAKADSRMKMSLQLFKVDENHYLVDFKDLVDTLVDQDLFGDDHGHHVTSHTKTMEFLDTCALLIKQLAVSSSS* # ORIGINAL: g12244.t1 original gene structure, not modified by PASA NODE_367_length_25778_cov_38.9036 AUGUSTUS gene 121 507 . + . ID=g12244;Name=g12244.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS mRNA 121 507 . + . ID=g12244.t1;Parent=g12244;Name=g12244.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 121 507 . + . ID=g12244.t1.exon1;Parent=g12244.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 121 507 . + 0 ID=cds.g12244.t1;Parent=g12244.t1 #PROT g12244.t1 g12244 PALLYLVPACIIFSMLAALVSGDFKQLWAYDENGIQPSALPASSPTAPSPNSNIVGHVSEKESSASDSAASSESADTVAKGKGKRAKSGSNATASESTTAASTASPGADSGANGSKAKSRTAKSKKAT* # ORIGINAL: g12246.t1 original gene structure, not modified by PASA NODE_367_length_25778_cov_38.9036 AUGUSTUS gene 9229 12410 . - . ID=g12246;Name=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS mRNA 9229 12410 . - . ID=g12246.t1;Parent=g12246;Name=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 12207 12410 . - . ID=g12246.t1.exon1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 12207 12410 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 11851 12044 . - . ID=g12246.t1.exon2;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 11851 12044 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 11420 11652 . - . ID=g12246.t1.exon3;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 11420 11652 . - 1 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 10927 11213 . - . ID=g12246.t1.exon4;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 10927 11213 . - 2 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 10689 10772 . - . ID=g12246.t1.exon5;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 10689 10772 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 10116 10343 . - . ID=g12246.t1.exon6;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 10116 10343 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 9597 9833 . - . ID=g12246.t1.exon7;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 9597 9833 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 9229 9306 . - . ID=g12246.t1.exon8;Parent=g12246.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 9229 9306 . - 0 ID=cds.g12246.t1;Parent=g12246.t1 #PROT g12246.t1 g12246 MLKIVQILVVLFAFMYVSTCSATNATPLLRPRVAIIGGGISGASAAHYLAQFLGKQNVDIVLYERADKLGGRVQAVDLGSGVVELGASAFLDGSRLAMNLTEEFDIPKCASSRRSDFGVWDGRNFVFKSSNSDLVTLFLLMQRYGLDVWRMSGVTPAVAERLSLLYERPSFSSVEDMLGEIGLLNLTQSSMESYLEGRGVGKPFSSEIVQPISDHIYYQRLSDMHALGGFASIVSGQSERLFRVCAGNSVLIDSLARSSGASVRLGRTVTKLELESPSEEGGRILVFTLEDEVPDSFDAVLIASPLESNDVDIRGVKPVDTAFIRRTYLPIHVTVVRGHLNASVFVRDAPPDSAIPSHILTSEAQGPYEALPFISLQHVRDGADGMGTYKLLSREHLSDEWLKRLFTDRKAVHRHSWKHAYPMLSPVSMTMDAFPPIIPACNVVYLNAAESALSMMETQLVVARNGARLLSEAFAFKSALCPPRAQRPTLVSEGTDHLDKGTAKEEEAPEHMEL* # ORIGINAL: g12248.t1 original gene structure, not modified by PASA NODE_367_length_25778_cov_38.9036 AUGUSTUS gene 19561 25642 . + . ID=g12248;Name=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS mRNA 19561 25642 . + . ID=g12248.t1;Parent=g12248;Name=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 19561 19645 . + . ID=g12248.t1.exon1;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 19561 19645 . + 0 ID=cds.g12248.t1;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 20084 21288 . + . ID=g12248.t1.exon2;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 20084 21288 . + 2 ID=cds.g12248.t1;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 21638 21762 . + . ID=g12248.t1.exon3;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 21638 21762 . + 0 ID=cds.g12248.t1;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 21995 22127 . + . ID=g12248.t1.exon4;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 21995 22127 . + 1 ID=cds.g12248.t1;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS exon 22493 25642 . + . ID=g12248.t1.exon5;Parent=g12248.t1 NODE_367_length_25778_cov_38.9036 AUGUSTUS CDS 22493 25642 . + 0 ID=cds.g12248.t1;Parent=g12248.t1 #PROT g12248.t1 g12248 MQGRSSRLCSVSYGRIRLAIFSFVAVVSVGTLLLSVSHRDDLWDRSLIRNVSGRRPQAPISDDDSLLDKKGGNQNSIDEAGKNEQDLHAIGARDSVRSRGGVLKDGHVGKADGDVGTNRGQKEFVRMQGDAPVKDAAEKLDPRRADAAAALERNPDVPRELNIQKQPFGSDGRDNGNADFARERAAAEGSKKGDIANDNVPVAPLDGAWRVDGVPGGVPGGKRAEEGDGGKRAAVGRDESATQRVLSKDDDLLSKRTNVDKETHVLTMGDNVAALSVAEMSLESARSFYAGKPSDAFVASVLAIHAARQRKSSAENSDGRGSPSSRETGRSVRSRGSHVAQQSQPRRNLMDFMWSAIIDGDLPSRHVTGGALVFDGNRDYGKMSNAAPAISPSVREGTVLEVGSGGFALAAVRGKRARAALVLCPNGDEEANELVSARNAEGLLEVKAASTPPDALERAIDTLYDHPTVLFRTVFVGNITAVVGTLLPHELERVLAKIFLLGRETIIRETKMSGRTASYFSYWPTFKLFLERAVAIAGIDATVKEVADYSLWSSSGIRLYHVGPKNATREISSELCSFLAPSSLDSNNNNNNNNNNNNNNNAEDRNACALVTSTMHVVNSTTAFTEIVHLHHGAQRHPLANVTDVIPMDALFALPLVASDRESLFGVILDRMASALQRGSSDRHPDVFAALLETANTALLAGKSVGRISSNLAFHNRDAVDVPLRWRMRASTMDRDLGARLMAEDVFGGEWALPVGGAATDARSPPGVPGSVLGSTGSSSVSSSSASGGMTAVSPEAQMQAFVLQMLASGAASGKPLTSDEIAKAMVEKQKKEGDGSSPGVSAGGSLNGKDGAVVSTNGKDGEVGSGDATVKGRKLLSIATLSRPLRMYKSLWDVVSPHLPAIASLGEPWTVFATGGRSTLVATKIAKRFPSSRVLALIDDADEDAAREARRLRQSLALDNLVVLRGKMDAPTALRLVKSPDMFSVQIVGVDAFLPLLSRPHSASPSSSPDANPASLSLESLAAHLGGVISLARVTFLELPLPEVLYAAWEDAIHAPEEISDISEDRNDHVDVGSTRDTRELRRNAFLVSFKGLLDAAAVSVGADCDIRILGDSSAAASGCLVARIALNTVARRVDSGCDGNDVATLSIRRTVEGMGRSRHEASLLLPDGSAAPLRRAFSWVSLSFVLRAGIDSTETKLLFREYLSLPPSRNMCPVHVGVGLRVGKGASLTHDPIGEAQTEEATYHDDTDRIEAARKDTLVAFYEGENASNEGNDAADADSAIRIHARAVRFVDDAAVFALVSPLLDREGGAFSFMEHGSGDGLFSLMVARRYPNATVVSLESDEVLADAHTRAASSLGLHNNAVCRPAATSIPAKDIVTKLFESPEFLRYQYVRLDALLGTIAALSRTDVDTLLGQLMSTGLTSFFQVPSAATLSLAFTTFFPEFGHGGALDGRAEEEQDDESMRTPRVSRFGRHMTGHPTRYMWDTHPLPAFVDAEKRLIGESSRADTLNTSVSAIMLSPVAPTRANVAQHVGDPGWRIVEVTVRNMTASVNHHFDYKVCVCV* # ORIGINAL: g12675.t1 original gene structure, not modified by PASA NODE_3247_length_3920_cov_35.3446 AUGUSTUS gene 138 600 . + . ID=g12675;Name=g12675.t1 NODE_3247_length_3920_cov_35.3446 AUGUSTUS mRNA 138 600 . + . ID=g12675.t1;Parent=g12675;Name=g12675.t1 NODE_3247_length_3920_cov_35.3446 AUGUSTUS exon 138 262 . + . ID=g12675.t1.exon1;Parent=g12675.t1 NODE_3247_length_3920_cov_35.3446 AUGUSTUS CDS 138 262 . + 0 ID=cds.g12675.t1;Parent=g12675.t1 NODE_3247_length_3920_cov_35.3446 AUGUSTUS exon 465 600 . + . ID=g12675.t1.exon2;Parent=g12675.t1 NODE_3247_length_3920_cov_35.3446 AUGUSTUS CDS 465 600 . + 1 ID=cds.g12675.t1;Parent=g12675.t1 #PROT g12675.t1 g12675 DDNVLSSHFNVKQAVEVATQLRPTRTYLIGMNHLLEHEETNRRLEQLATKEGAPWMRCAFDGEKVLFSHVLAESRAPIDAEATRYY* # PASA_UPDATE: g12676.t1, single gene model update, valid-1, status:[pasa:asmbl_5771,status:12], valid-1 NODE_3247_length_3920_cov_35.3446 . gene 967 3823 . - . ID=g12676;Name=g12676.t1 NODE_3247_length_3920_cov_35.3446 . mRNA 967 3823 . - . ID=g12676.t1;Parent=g12676;Name=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 3682 3823 . - . ID=g12676.t1.exon1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 3682 3823 . - 0 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 3193 3356 . - . ID=g12676.t1.exon2;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 3193 3356 . - 2 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 2535 2832 . - . ID=g12676.t1.exon3;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 2535 2832 . - 0 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 2198 2367 . - . ID=g12676.t1.exon4;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 2198 2367 . - 2 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 1859 1967 . - . ID=g12676.t1.exon5;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 1859 1967 . - 0 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . exon 967 1538 . - . ID=g12676.t1.exon6;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . CDS 1327 1538 . - 2 ID=cds.g12676.t1;Parent=g12676.t1 NODE_3247_length_3920_cov_35.3446 . three_prime_UTR 967 1326 . - . ID=g12676.t1.utr3p1;Parent=g12676.t1 #PROT g12676.t1 g12676 MLACLQGLGENDRVLMKYRYFNKLNLTRNDSVRLNLLYHQAKTEYLNGELNAKETELCKLAAMQCQILFGDFNEGKHTLNFLDASRKSILPRVYKLKPLVKKINSEHQSLGGASEIDAKYCFVKLWSTLPSFGVEWFTCMEKNTKRKALLGVSHDKVFFAADGNKEVENWALAMIQKWTEDTVASMVSLVLAKGRIQLIFPGKGARTLCQCLQGNIEVIVIQRNQTDWSDDRGAAPAPAPTGGKDRKSKDLTINSMKDDMYWSEKFSNPLDDHGLSASELAFDAQKAGVQVTTAGDDWEIDVSAASVVKKAIALYDYNAVADHLLSIHKGEKLDIISESADGWWEARNEAGNTGAVPKNYVKMI* # ORIGINAL: g7408.t1 original gene structure, not modified by PASA NODE_2445_length_6237_cov_21.7971 AUGUSTUS gene 1647 2601 . + . ID=g7408;Name=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS mRNA 1647 2601 . + . ID=g7408.t1;Parent=g7408;Name=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS exon 1647 1731 . + . ID=g7408.t1.exon1;Parent=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS CDS 1647 1731 . + 0 ID=cds.g7408.t1;Parent=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS exon 1933 2349 . + . ID=g7408.t1.exon2;Parent=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS CDS 1933 2349 . + 2 ID=cds.g7408.t1;Parent=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS exon 2504 2601 . + . ID=g7408.t1.exon3;Parent=g7408.t1 NODE_2445_length_6237_cov_21.7971 AUGUSTUS CDS 2504 2601 . + 2 ID=cds.g7408.t1;Parent=g7408.t1 #PROT g7408.t1 g7408 MGDVATFFSRGGFFLLLLQALLRDVCFEGANAATLSASTITLPFVLASAESGDTIQLAAGTYSSIINSGPIVVSNKALAFVRNPSALTAPIFSCRTVLSSSQAGFSSAFNVQLGANVSFVGITFRSCGRGGIVTPIRFGIEVGFNETNIGTVNATTSEVSFTDCIFTTSGQVLAARNQARVTMTRTSIAGEHLIARVRP* # ORIGINAL: g9223.t1 original gene structure, not modified by PASA NODE_1149_length_13535_cov_42.793 AUGUSTUS gene 10948 13443 . - . ID=g9223;Name=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS mRNA 10948 13443 . - . ID=g9223.t1;Parent=g9223;Name=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 13336 13443 . - . ID=g9223.t1.exon1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 13336 13443 . - 0 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 12965 13144 . - . ID=g9223.t1.exon2;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 12965 13144 . - 0 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 12490 12687 . - . ID=g9223.t1.exon3;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 12490 12687 . - 0 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 12099 12264 . - . ID=g9223.t1.exon4;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 12099 12264 . - 0 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 11733 11830 . - . ID=g9223.t1.exon5;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 11733 11830 . - 2 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 11442 11541 . - . ID=g9223.t1.exon6;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 11442 11541 . - 0 ID=cds.g9223.t1;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 10948 11171 . - . ID=g9223.t1.exon7;Parent=g9223.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 10948 11171 . - 2 ID=cds.g9223.t1;Parent=g9223.t1 #PROT g9223.t1 g9223 MVVSAASALQNDATARPAPVSIWRTYFVANEWNEIQTVRKTSMNFQLFALAFILVALDVQYLATDVPSSNLDKAPINAVLRFAVATSIWLGLALVQLLYNYFIYERFVEDKIGQFSDLCSVSNVSVFVMEEPYFGHYLHGRSVHGYADTDMWEMNEQLRKEEEDLCGHRGLLPNSENQSFEMHLPTALREHYDRVFLSLVAEQKGARVKAAASNTGGGRVQSQRSSRGISDKTIQAYLAVNRFLAAFIDHALKEVDYVVKDKLFLEQLVGLAPRAGDKGVFYNEGGHAYSKSLFYGNEWTLLLLDIMFYSIVDLIFENTMVSIVVTFVFDRLLCAYRNSAAESNLAKKTLVDKRFLI* # PASA_UPDATE: g9220.t1, single gene model update, valid-1, status:[pasa:asmbl_558,status:3], valid-1 NODE_1149_length_13535_cov_42.793 . gene 1468 6065 . + . ID=g9220;Name=g9220.t1 NODE_1149_length_13535_cov_42.793 . mRNA 1468 6065 . + . ID=g9220.t1;Parent=g9220;Name=g9220.t1 NODE_1149_length_13535_cov_42.793 . five_prime_UTR 1468 2177 . + . ID=g9220.t1.utr5p1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 1468 2864 . + . ID=g9220.t1.exon1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 2178 2864 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 3098 3256 . + . ID=g9220.t1.exon2;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 3098 3256 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 3509 3702 . + . ID=g9220.t1.exon3;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 3509 3702 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 3858 4098 . + . ID=g9220.t1.exon4;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 3858 4098 . + 1 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 4249 4489 . + . ID=g9220.t1.exon5;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 4249 4489 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 4640 4740 . + . ID=g9220.t1.exon6;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 4640 4740 . + 2 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 4901 4996 . + . ID=g9220.t1.exon7;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 4901 4996 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . exon 5300 6065 . + . ID=g9220.t1.exon8;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . CDS 5300 5359 . + 0 ID=cds.g9220.t1;Parent=g9220.t1 NODE_1149_length_13535_cov_42.793 . three_prime_UTR 5360 6065 . + . ID=g9220.t1.utr3p1;Parent=g9220.t1 #PROT g9220.t1 g9220 MSDDASHSNGKVGLENGSHDALSEIPANLAPASEAPTGEVALVFTDIQGSTQLWDTVPETMKQAIIMHNNMMRRLLKKYNGYEVKTEGDAFMVAFQDVIGALKWCLEAQLELMRTKWPRELLEVEAGKEEKSEDDIVLFRGLRVRMGIHKGSPHCEPDPTHGRMDYFGPVVNRAARVAGIAEGGQIIVSRSVIEDVVNRWDELQEFDPVQAELGSFKLKGLGDAEFLTQIYPRELPRQFGTHDTTDPWFSFTSGRDINKSSKAETTQRRTSQQAPRALPLPKPEENNISWLVPSAEIRLGVKLGSGASGEMYKADWKGMKVAVKKLFRQKMDDTALEDWKTELSILSQIRHPNCILFMGAILEPGKMWIISEYMPKGSLHDVLHDTSQSLSWPQRINMSKDVARAMLYLHTYKPPIIHRDLKSHNMLVDNNFVVKVGDFGFARILASSSVMTQCGTMCWTAPEILRGKKYDEKVDLYSYGIVLWEIGTRQDPHEGVNALKLAMKVLQGERPPVPKYFPDFYTELMTACWADDPTQRPDFGEVLDKLDSISVQQLNSISRASISIKSITSKKKTPDTAASDKGNQQSSACAIL* # ORIGINAL: g9222.t1 original gene structure, not modified by PASA NODE_1149_length_13535_cov_42.793 AUGUSTUS gene 8973 10401 . + . ID=g9222;Name=g9222.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS mRNA 8973 10401 . + . ID=g9222.t1;Parent=g9222;Name=g9222.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 8973 9740 . + . ID=g9222.t1.exon1;Parent=g9222.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 8973 9740 . + 0 ID=cds.g9222.t1;Parent=g9222.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 10111 10401 . + . ID=g9222.t1.exon2;Parent=g9222.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 10111 10401 . + 0 ID=cds.g9222.t1;Parent=g9222.t1 #PROT g9222.t1 g9222 MPPKTGCNCGPTAKCVTARCACNGGNCANVRCECNPDVCENRRNHAAATAAAPRPKQSSGCECGPTSMCKTQLCACVKAGGLCSASRCGCNSAACTNNAAASSSLSSSTATRKTVDVTPTVLPAKQQQQASGAQLYARAGPIVTTYDHPTINNLASDVTSDLHVSVYDRRDAVIAFRGGIDMYTREKGAKLESPEVDHIVEVQVMGHATARALREERRARAQGILTPLKGALNMDMLHNYNVTSKSINSSKGQIHKNFLLDGIRNGQTIRSQAITMEAKAENYLGEISRAICNSFPHVYTAVADARRADGHVTGGNDFGAIVNELEVIFKAMDVEDDDSGRRKTRTAAAKKK* # PASA_UPDATE: g9219.t1, single gene model update, valid-1, status:[pasa:asmbl_559,status:12], valid-1 NODE_1149_length_13535_cov_42.793 . gene 147 789 . - . ID=g9219;Name=g9219.t1 NODE_1149_length_13535_cov_42.793 . mRNA 147 789 . - . ID=g9219.t1;Parent=g9219;Name=g9219.t1 NODE_1149_length_13535_cov_42.793 . five_prime_UTR 746 789 . - . ID=g9219.t1.utr5p1;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . exon 719 789 . - . ID=g9219.t1.exon1;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . CDS 719 745 . - 0 ID=cds.g9219.t1;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . exon 335 501 . - . ID=g9219.t1.exon2;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . CDS 335 501 . - 0 ID=cds.g9219.t1;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . exon 147 231 . - . ID=g9219.t1.exon3;Parent=g9219.t1 NODE_1149_length_13535_cov_42.793 . CDS 147 231 . - 1 ID=cds.g9219.t1;Parent=g9219.t1;3_prime_partial=true #PROT g9219.t1 g9219 MSRETEEEKAFMETQMRMIEAQRRVNIIGAQIEAKQREIKRCEITTQELAHLSDSTKTYKGVGKMFLLLPIEDLKIEMRNKAKHGENDISELK # ORIGINAL: g9221.t1 original gene structure, not modified by PASA NODE_1149_length_13535_cov_42.793 AUGUSTUS gene 6829 8298 . - . ID=g9221;Name=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS mRNA 6829 8298 . - . ID=g9221.t1;Parent=g9221;Name=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 7986 8298 . - . ID=g9221.t1.exon1;Parent=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 7986 8298 . - 0 ID=cds.g9221.t1;Parent=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 7694 7794 . - . ID=g9221.t1.exon2;Parent=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 7694 7794 . - 2 ID=cds.g9221.t1;Parent=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS exon 6829 7362 . - . ID=g9221.t1.exon3;Parent=g9221.t1 NODE_1149_length_13535_cov_42.793 AUGUSTUS CDS 6829 7362 . - 0 ID=cds.g9221.t1;Parent=g9221.t1 #PROT g9221.t1 g9221 MDADVCITKKRVAAFVGLGTMGYPIAGRLASSGVFSAVRVYTRTSEKAHQHAHTHNSVACESICELLSTSETSGRPSFVFTCLPTTTQVGEVVDAARPHLARGTVWIDITTGDPTRTRAISLSLIDVGVHFVDAPVSGGSRGAAAGTLTTMVGADASVLDMCRFALSTYCACIVHAGCPGNGHTLKAVNNAMAVSHFVIACEGLVALSRAGVPPAAALKAINASSGRSLMTEARFPSEVLTRQFSYGGKGSLSLWAKDAALGAGVVSGSIGDVATLIPAAADVIMRAADAMGGDADETELVRLFETACGVELTNA* # ORIGINAL: g3389.t1 original gene structure, not modified by PASA NODE_1358_length_11788_cov_35.4323 AUGUSTUS gene 104 415 . - . ID=g3389;Name=g3389.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS mRNA 104 415 . - . ID=g3389.t1;Parent=g3389;Name=g3389.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 315 415 . - . ID=g3389.t1.exon1;Parent=g3389.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 315 415 . - 0 ID=cds.g3389.t1;Parent=g3389.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 104 216 . - . ID=g3389.t1.exon2;Parent=g3389.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 104 216 . - 1 ID=cds.g3389.t1;Parent=g3389.t1 #PROT g3389.t1 g3389 MLEENGDAILSAGEAEVYIQSLEVIPLREIGGHRWLRQHEYIEKLNMQALLNARAQTDEFIMELFISHDKA # ORIGINAL: g3390.t1 original gene structure, not modified by PASA NODE_1358_length_11788_cov_35.4323 AUGUSTUS gene 1321 11320 . + . ID=g3390;Name=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS mRNA 1321 11320 . + . ID=g3390.t1;Parent=g3390;Name=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 1321 1509 . + . ID=g3390.t1.exon1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 1321 1509 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 1767 1851 . + . ID=g3390.t1.exon2;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 1767 1851 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 2022 2169 . + . ID=g3390.t1.exon3;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 2022 2169 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 2426 2513 . + . ID=g3390.t1.exon4;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 2426 2513 . + 1 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 2765 2837 . + . ID=g3390.t1.exon5;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 2765 2837 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 3171 3648 . + . ID=g3390.t1.exon6;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 3171 3648 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 4053 4206 . + . ID=g3390.t1.exon7;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 4053 4206 . + 1 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 4510 4675 . + . ID=g3390.t1.exon8;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 4510 4675 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 4956 5082 . + . ID=g3390.t1.exon9;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 4956 5082 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 5284 5353 . + . ID=g3390.t1.exon10;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 5284 5353 . + 1 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 5738 5873 . + . ID=g3390.t1.exon11;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 5738 5873 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 6283 6432 . + . ID=g3390.t1.exon12;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 6283 6432 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 6903 7328 . + . ID=g3390.t1.exon13;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 6903 7328 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 7861 7961 . + . ID=g3390.t1.exon14;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 7861 7961 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 8467 8638 . + . ID=g3390.t1.exon15;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 8467 8638 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 8898 8976 . + . ID=g3390.t1.exon16;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 8898 8976 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 9292 9386 . + . ID=g3390.t1.exon17;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 9292 9386 . + 1 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 9782 10023 . + . ID=g3390.t1.exon18;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 9782 10023 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 10279 10413 . + . ID=g3390.t1.exon19;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 10279 10413 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 10656 10704 . + . ID=g3390.t1.exon20;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 10656 10704 . + 0 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 10923 11153 . + . ID=g3390.t1.exon21;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 10923 11153 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS exon 11301 11320 . + . ID=g3390.t1.exon22;Parent=g3390.t1 NODE_1358_length_11788_cov_35.4323 AUGUSTUS CDS 11301 11320 . + 2 ID=cds.g3390.t1;Parent=g3390.t1 #PROT g3390.t1 g3390 MCTSGPYCSPGLLRLLLATAFVVCLVVDSSHGVRYMLNSSSTFSFRLPYPKNANELFVYKAAASSNARYVSFTPTLLDIECGWDYVYLEASGVIIGGLSGTLANPRRVIVNATTAAATFATDSDCCDVMGGVSITSTLSLCPLNCSLNGVCVGGSCKCNSGFIGLACEQQACPSNCSGHGTCLSVGCDCHEGFTGEACDAPLDLGVWSTVAISPYLAGCGDSKRRDVRSRPSVAFFGKETLEVDRFSAASVAHSTVLSAPNLAAECAAAGHVYGLPLPNATSSGWALSTNVPTADAIGLLSRFAHSAVLLQSAGVLPAGGIEGSASGGAFPSGPSLWLFGGMSLDYELLASLVRVNVTSGGYDAIPMQSNPATLWPAARHSHAAAAWRNSLIVVGGVTYAGVTSETWLYNATVGTWVSLPPCPIAMAGHTATFGSGNILYVIGGYSVAQGYGKTVYTFSTVSRTWSSFKPSGVPMRGTFGHTATYHRQTNSIFVHGGGRPSPRGASKPSSDLYALSITNGTYRKLKPSPSLRYLHGSFIVGDFLVSLGGSGFSVPSAIDACMSPDAFVYDMLADSWSPYAAASIPGRRFGYATAADPSSDSVFLSGGFDGVAMDGVIRFTLSNCTALPATFSACDTATGGLCRVCASSDGTNVTCSPAWSRAFPSSACAARSSSLPISMSRAPTSTSVPQIAARTYDLCLVRTTCQDCLNATLFYANVANAPTGPYESCAWCAATQSCRMESLARAQDALGCGVFSVDRCRADGAIDTSCASAKTYDDCIAREGCASPIDICVADPRRISCSSQQSCEACLSQPSQICMWCASTGTCIDPEAYPTTMPFGQCTRWYGYSPAQCKDVCADIIDCATCNTHPECGWCENSNGRGTGTCSRGSVFGPSPTSQSCHSNRWFYGSCPRCQCNGHSDCGASGSTCLACDGNTQGPQCERCNTDFFGLPRNGGTCRPCAILSTGICTACNSTTGGCTHCTNGGSGPSCETCPVGSYRSGTDCVPCHCNGGSSDCNVVTGVCSLCLPGYTGSHCMECTDQFMSDPLYNGTCYMSLEMNTRYIMNETRGAFAFRNIRSDIALTISMSVLDKPGGVAVRRDDSRDHSHDDSRDDRRTIEDFISIKILGVANDVVFYC* # PASA_UPDATE: g13159.t1, single gene model update, valid-1, status:[pasa:asmbl_6476,status:12], valid-1 NODE_3742_length_2858_cov_34.5358 . gene 464 2617 . - . ID=g13159;Name=g13159.t1 NODE_3742_length_2858_cov_34.5358 . mRNA 464 2617 . - . ID=g13159.t1;Parent=g13159;Name=g13159.t1 NODE_3742_length_2858_cov_34.5358 . five_prime_UTR 2519 2617 . - . ID=g13159.t1.utr5p1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . five_prime_UTR 2316 2321 . - . ID=g13159.t1.utr5p2;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 2519 2617 . - . ID=g13159.t1.exon1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 2277 2321 . - . ID=g13159.t1.exon2;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 2277 2315 . - 0 ID=cds.g13159.t1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 1848 1971 . - . ID=g13159.t1.exon3;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 1848 1971 . - 0 ID=cds.g13159.t1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 1430 1590 . - . ID=g13159.t1.exon4;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 1430 1590 . - 2 ID=cds.g13159.t1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 1087 1147 . - . ID=g13159.t1.exon5;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 1087 1147 . - 0 ID=cds.g13159.t1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 699 828 . - . ID=g13159.t1.exon6;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 699 828 . - 2 ID=cds.g13159.t1;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . exon 464 494 . - . ID=g13159.t1.exon7;Parent=g13159.t1 NODE_3742_length_2858_cov_34.5358 . CDS 464 494 . - 1 ID=cds.g13159.t1;Parent=g13159.t1;3_prime_partial=true #PROT g13159.t1 g13159 MNARWKSCAVKMLKEGSTEAERVAFLAEADVMKNIRHPHVIRLLGMCSAAEPMLVLVEYAHHGNLRTFVQQIPARMQGTRSVEAELRQFSRDIAAGMAHLASINIVHRDLAARNCLVADHEGDYVIKIADFGLSRNMGESEYVVKTKNQKLPVRWLAPEANTKKIFNERSDGWSYGVTLWEV # ORIGINAL: g2246.t1 original gene structure, not modified by PASA NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS gene 107 229 . - . ID=g2246;Name=g2246.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS mRNA 107 229 . - . ID=g2246.t1;Parent=g2246;Name=g2246.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 107 229 . - . ID=g2246.t1.exon1;Parent=g2246.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 107 229 . - 0 ID=cds.g2246.t1;Parent=g2246.t1 #PROT g2246.t1 g2246 MSKKEKGGKEGKVPQKASAVALPSRDSELFDLPSNANALAN # ORIGINAL: g2247.t1 original gene structure, not modified by PASA NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS gene 826 2999 . - . ID=g2247;Name=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS mRNA 826 2999 . - . ID=g2247.t1;Parent=g2247;Name=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 2984 2999 . - . ID=g2247.t1.exon1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 2984 2999 . - 0 ID=cds.g2247.t1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 2543 2652 . - . ID=g2247.t1.exon2;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 2543 2652 . - 2 ID=cds.g2247.t1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 2224 2352 . - . ID=g2247.t1.exon3;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 2224 2352 . - 0 ID=cds.g2247.t1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 1695 1759 . - . ID=g2247.t1.exon4;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 1695 1759 . - 0 ID=cds.g2247.t1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 1392 1559 . - . ID=g2247.t1.exon5;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 1392 1559 . - 1 ID=cds.g2247.t1;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS exon 826 1093 . - . ID=g2247.t1.exon6;Parent=g2247.t1 NODE_3565_length_3193_cov_43.5869_potentialcontaminant AUGUSTUS CDS 826 1093 . - 1 ID=cds.g2247.t1;Parent=g2247.t1 #PROT g2247.t1 g2247 MGVRVNAKFDFRCVFLAPKSRQSLILSIERRCEIFVEAGLVEEVVELMSRGFGVKDTASKAVGYSQALQYIRGYWLKSEGSSGTAIRPDVTRAEFIKFMMAFMAGTRQLAAQQFAWSRMEKNFYAAGIDQYVSRGVATAPGRLPRQAKLRVAREITGLLAKDRAYFESRLEKNQPEKEILCARLSSKLAHMKDVEHYESLHTTIPSLMKRRIEKIGQAVITHLPKSASQEALNARPYQIRTGEIPMWDDAL* # PASA_UPDATE: g6235.t1, single gene model update, valid-1, status:[pasa:asmbl_2401,status:3], valid-1 NODE_1706_length_9586_cov_35.7688 . gene 1841 5600 . - . ID=g6235;Name=g6235.t1 NODE_1706_length_9586_cov_35.7688 . mRNA 1841 5600 . - . ID=g6235.t1;Parent=g6235;Name=g6235.t1 NODE_1706_length_9586_cov_35.7688 . five_prime_UTR 5543 5600 . - . ID=g6235.t1.utr5p1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 5474 5600 . - . ID=g6235.t1.exon1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 5474 5542 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 5242 5316 . - . ID=g6235.t1.exon2;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 5242 5316 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 4970 5093 . - . ID=g6235.t1.exon3;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 4970 5093 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 4751 4818 . - . ID=g6235.t1.exon4;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 4751 4818 . - 2 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 4285 4462 . - . ID=g6235.t1.exon5;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 4285 4462 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 3858 4015 . - . ID=g6235.t1.exon6;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 3858 4015 . - 2 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 3500 3592 . - . ID=g6235.t1.exon7;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 3500 3592 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 3082 3222 . - . ID=g6235.t1.exon8;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 3082 3222 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 2712 2837 . - . ID=g6235.t1.exon9;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 2712 2837 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . exon 1841 2406 . - . ID=g6235.t1.exon10;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . CDS 2122 2406 . - 0 ID=cds.g6235.t1;Parent=g6235.t1 NODE_1706_length_9586_cov_35.7688 . three_prime_UTR 1841 2121 . - . ID=g6235.t1.utr3p1;Parent=g6235.t1 #PROT g6235.t1 g6235 MESLKGISIPDFKTVSEGSQTYTVYNVCAEGRLLCSRRYNEFVELNNSLKGEYPTATSQLPKMPAKWPFSLSLAQLDQRRKELEAYLRGVAGNSQLAASDAMTHFIRGNRKATAAGDIVEIIVGMPDDTHLGVSVECNATANDVYGAFARRAGMEGADHFFFLFEISPGGFARKLLNSEIVYDIYQRREQGARTNLCVRKWIFTKRQEIFASGNATAIGILAYQARKELESGHLAATTDERSKLDELWNGEGKIAFLASARKLARYSTIQFPPCDCDGYSGKVILSVSLSGIQMAKALPTGQAGKSREFRWQVIKRWACDTDSGEFKLEHGEGEGGWVALASEYAVFMAECVGRVVTELTWAREANKRAAAAAAKSETSPSPASRAVALSSASDADSAKDAPASPVVRSSAYGAFNFFKRQESVDVNMDERGIGDDDL* # ORIGINAL: g6236.t1 original gene structure, not modified by PASA NODE_1706_length_9586_cov_35.7688 AUGUSTUS gene 6064 6381 . - . ID=g6236;Name=g6236.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS mRNA 6064 6381 . - . ID=g6236.t1;Parent=g6236;Name=g6236.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 6064 6381 . - . ID=g6236.t1.exon1;Parent=g6236.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 6064 6381 . - 0 ID=cds.g6236.t1;Parent=g6236.t1 #PROT g6236.t1 g6236 MNSDGSEVVWTCNALNSVTDNSAIHDPIDLGKLTVTKGGVAASCVANAQYRISFGFGLDVGAHLNCHCVDGEPLVAVDSQSNSELYLCPDVQAAPSVFSAQLARP* # PASA_UPDATE: g6234.t1, single gene model update, valid-1, status:[pasa:asmbl_2402,status:12], valid-1 NODE_1706_length_9586_cov_35.7688 . gene 31 1853 . + . ID=g6234;Name=g6234.t1 NODE_1706_length_9586_cov_35.7688 . mRNA 31 1853 . + . ID=g6234.t1;Parent=g6234;Name=g6234.t1 NODE_1706_length_9586_cov_35.7688 . five_prime_UTR 31 99 . + . ID=g6234.t1.utr5p1;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . exon 31 116 . + . ID=g6234.t1.exon1;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . CDS 100 116 . + 0 ID=cds.g6234.t1;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . exon 458 588 . + . ID=g6234.t1.exon2;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . CDS 458 588 . + 1 ID=cds.g6234.t1;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . exon 1312 1853 . + . ID=g6234.t1.exon3;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . CDS 1312 1547 . + 2 ID=cds.g6234.t1;Parent=g6234.t1 NODE_1706_length_9586_cov_35.7688 . three_prime_UTR 1548 1853 . + . ID=g6234.t1.utr3p1;Parent=g6234.t1 #PROT g6234.t1 g6234 MTLDGKKDISWHDEKGKKVKGLSAAQYIDFVTTYVQKQIADESVFPTKFGSTFSKEFLPVVRRIFTLLFHALGHIYTSHFHHVVGLGEEAHLNTLFTHFIYFAREFQLIDEKDLAPLAELIKALATE* # ORIGINAL: g6238.t1 original gene structure, not modified by PASA NODE_1706_length_9586_cov_35.7688 AUGUSTUS gene 8490 9398 . + . ID=g6238;Name=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS mRNA 8490 9398 . + . ID=g6238.t1;Parent=g6238;Name=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 8490 8549 . + . ID=g6238.t1.exon1;Parent=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 8490 8549 . + 0 ID=cds.g6238.t1;Parent=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 8769 8910 . + . ID=g6238.t1.exon2;Parent=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 8769 8910 . + 0 ID=cds.g6238.t1;Parent=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 9145 9398 . + . ID=g6238.t1.exon3;Parent=g6238.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 9145 9398 . + 2 ID=cds.g6238.t1;Parent=g6238.t1 #PROT g6238.t1 g6238 MCPPIPRTCVAHTQTPCLSKRRFVINGAAASELSNPGVCTGEWEQGFAEWVQAFGSWKNEVCAVCAGVDLIGSECTTRNALQTPDPHRPQSIFDHLSPQELLSVRAFLLDNTRNDLNLVDEVTVLKSNRINLIQVELPTKVSPQAWLRRPS* # ORIGINAL: g6237.t1 original gene structure, not modified by PASA NODE_1706_length_9586_cov_35.7688 AUGUSTUS gene 6535 7816 . - . ID=g6237;Name=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS mRNA 6535 7816 . - . ID=g6237.t1;Parent=g6237;Name=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 7735 7816 . - . ID=g6237.t1.exon1;Parent=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 7735 7816 . - 0 ID=cds.g6237.t1;Parent=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 7000 7292 . - . ID=g6237.t1.exon2;Parent=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 7000 7292 . - 2 ID=cds.g6237.t1;Parent=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS exon 6535 6714 . - . ID=g6237.t1.exon3;Parent=g6237.t1 NODE_1706_length_9586_cov_35.7688 AUGUSTUS CDS 6535 6714 . - 0 ID=cds.g6237.t1;Parent=g6237.t1 #PROT g6237.t1 g6237 MLLRARVPGIAVGVSLVLTLMLSTRLTDAVSTHAAYGGRFALLCLSTEDLSGGGMQNIPGNGEVFGECTVLHLGEGSTGSFLSCEGRYAIPPGAVLPTTVTYAYGATIDNANYVGLHVTAHGAVKIGFHADNNGDTMEKEIISKVAPNIDGNDDSGNDYIVATASSGAVVFKARVEPHFMKAGK* # ORIGINAL: g8583.t1 original gene structure, not modified by PASA NODE_1610_length_10201_cov_42.6246 AUGUSTUS gene 6318 9940 . + . ID=g8583;Name=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS mRNA 6318 9940 . + . ID=g8583.t1;Parent=g8583;Name=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 6318 6400 . + . ID=g8583.t1.exon1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 6318 6400 . + 0 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 6684 6772 . + . ID=g8583.t1.exon2;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 6684 6772 . + 1 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 7026 7132 . + . ID=g8583.t1.exon3;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 7026 7132 . + 2 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 7571 7724 . + . ID=g8583.t1.exon4;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 7571 7724 . + 0 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 8017 8213 . + . ID=g8583.t1.exon5;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 8017 8213 . + 2 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 8478 8562 . + . ID=g8583.t1.exon6;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 8478 8562 . + 0 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 8895 9088 . + . ID=g8583.t1.exon7;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 8895 9088 . + 2 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 9448 9611 . + . ID=g8583.t1.exon8;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 9448 9611 . + 0 ID=cds.g8583.t1;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 9835 9940 . + . ID=g8583.t1.exon9;Parent=g8583.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 9835 9940 . + 1 ID=cds.g8583.t1;Parent=g8583.t1 #PROT g8583.t1 g8583 MDTEIEARAQELFSLVAQDLTSLTALDGLFDCIVALTTECQATKPTKDKPAAIFLEQVRDDIEKLKSARMQRSDFETVKVIGKGAFGEVSLVKSKLDGAVYALKRLNKLEMLRQRDTAFFREERDVLVTSRSRWIAELYCSFQDESNLYLILEYLPGGDLFGLISRYERFTEDMARFYMAEIVLAVDAVHELGFIHRDIKPDNMLITGLGHIKLVDFGSCVKMDKNGKVRSATAVGTPDYLSPEVLTSTDGEKSYGREVDWWSVGACLYEMLCGDPPFNSDTRVGTYGKIMNFKTSLVIPTDEMSADAASLIRGLICAAEVRLGREGAANIKTQPFLKGVDFANIHTQTAPHLPQLKGLTDTSNFDDIEDDDEPTPAVRARKVGHNRLCLFV* # ORIGINAL: g8582.t1 original gene structure, not modified by PASA NODE_1610_length_10201_cov_42.6246 AUGUSTUS gene 1734 4812 . - . ID=g8582;Name=g8582.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS mRNA 1734 4812 . - . ID=g8582.t1;Parent=g8582;Name=g8582.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 3569 4812 . - . ID=g8582.t1.exon1;Parent=g8582.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 3569 4812 . - 0 ID=cds.g8582.t1;Parent=g8582.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 1734 3234 . - . ID=g8582.t1.exon2;Parent=g8582.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 1734 3234 . - 1 ID=cds.g8582.t1;Parent=g8582.t1 #PROT g8582.t1 g8582 MNTSIVPEGTVRPAMTASAVHSPLRDDDDAPYSRPVSNIGSRERTATHSGSDMAAELLPHSMGHEEDGARSPREEAVLGSKKATPTETSAMAPTPPVRHHSLSLVSSRTASDTRNDSDILVPYSETGGAPLLKTTSLPASKRQNRTAAPAPAPAPTRGSSTMSALSAAYNRILERFVDNDVEEAPSTAVAEQIVQTTATAPISPTPDAVHQEDAAGAGAVSPPAALRNKRGSIRKTSDKSLFGVSAVAPADPASSSVKKTSNVVSPFAIARGMEDGLDEEAYGTVNLPTIPSSSTIPQWEVVVQGEDGQDINGEENALDLDLFDRPPGNEDGEGERSDPDEDSEPPINTTMNYDTIGTDTMGNEDEDSRLRARVLAVMRLSFMCLYIGVFVSTLSVVYMAACMFWMESFHPTAFGDISTAKQWIYMITQYFVACFWVPMPYVIIRFVFSADLVPKTAMYASIAASCAVLVYLIAMQATRVYDPDHWYFNIPPYVASLVTLVWVTRVVSSDQVIAVIQMIRRNFHRSVGANASKKPSTGDPSSSAGARVSRLFASNSHMRASLGSTPAWAHQLSAALGGANLLASVSGQVPLQATRGRSASTVSTMANPGSNNERHPALKQSMTTAKKKRKSCLSALREWWKSPKRVLAVALVTPIAIGIIYALSFQVAVAEWYSQTDTSDTQRRLYIILVIPAASYVVQQLSMNACKSLPKILLPNAWALATLCLLVVALSKRLLLAALDDVSSIALFTSIVELGQLISNLTVDLRAALIYRLRHGRAIPLSHLKSSTRFVFLVQFFTQRLIVDYASTLVAGFSLIMVHFAYFENQLHSKAFVWRIISSMVVQLALQVAFSLPYLWLLCRRDSRKFRVMYDQRRQLTYVCAFLMFTAVVAASTQMIQAMQKNVIRVYGYNATGG* # ORIGINAL: g8581.t1 original gene structure, not modified by PASA NODE_1610_length_10201_cov_42.6246 AUGUSTUS gene 734 1293 . + . ID=g8581;Name=g8581.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS mRNA 734 1293 . + . ID=g8581.t1;Parent=g8581;Name=g8581.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 734 862 . + . ID=g8581.t1.exon1;Parent=g8581.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 734 862 . + 0 ID=cds.g8581.t1;Parent=g8581.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS exon 955 1293 . + . ID=g8581.t1.exon2;Parent=g8581.t1 NODE_1610_length_10201_cov_42.6246 AUGUSTUS CDS 955 1293 . + 0 ID=cds.g8581.t1;Parent=g8581.t1 #PROT g8581.t1 g8581 MLITGTFRGKSDIASRTIWGVKGCGKTVALKKNFAEKWRLSRMLAFDFLCSVFRAFIKANEALVDGAINPDTKRFALKRIGELKWESFKPLSFQKVVQIHSALPNRRPGAKAMSDGRYLVDRGWFGERSERLYASRFMELVAFAAREEADPVEPE* # ORIGINAL: g3434.t1 original gene structure, not modified by PASA NODE_2547_length_5926_cov_38.6826 AUGUSTUS gene 305 5389 . - . ID=g3434;Name=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS mRNA 305 5389 . - . ID=g3434.t1;Parent=g3434;Name=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 5305 5389 . - . ID=g3434.t1.exon1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 5305 5389 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 4702 5009 . - . ID=g3434.t1.exon2;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 4702 5009 . - 2 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 4116 4286 . - . ID=g3434.t1.exon3;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 4116 4286 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 3533 3745 . - . ID=g3434.t1.exon4;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 3533 3745 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 3035 3126 . - . ID=g3434.t1.exon5;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 3035 3126 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 2721 2796 . - . ID=g3434.t1.exon6;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 2721 2796 . - 1 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 2254 2383 . - . ID=g3434.t1.exon7;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 2254 2383 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 1939 2004 . - . ID=g3434.t1.exon8;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 1939 2004 . - 2 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 1708 1817 . - . ID=g3434.t1.exon9;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 1708 1817 . - 2 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 1356 1448 . - . ID=g3434.t1.exon10;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 1356 1448 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 917 1066 . - . ID=g3434.t1.exon11;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 917 1066 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS exon 305 548 . - . ID=g3434.t1.exon12;Parent=g3434.t1 NODE_2547_length_5926_cov_38.6826 AUGUSTUS CDS 305 548 . - 0 ID=cds.g3434.t1;Parent=g3434.t1 #PROT g3434.t1 g3434 MELNAQNVQGVSHYLEQSLSHERDVRKAAEDSLRSVEAMPGYSQLLVHVMQSDAIPGHIRQAASVTFKNYIKANWHAVDAEHNRICDADRIAVRASIIDIMLAVPEQVQKQIGEALSIMGKSDFPDRWPTLVTDLVSRLGAGNFKAINGVLTVAHSIFKRYRHETGTERMFTEVQYVVDAFAEPLTKLFLGTVHALESGAAGTSKADARLACASLVLISKIFYSLNCQDNPQFFVDNLESWMSAFHKLIVLNSPLLASKDDDEPGPLEELKSQICENVALYAQKYDEDFNAYLPRFVDAIWHLLTTASAEPKYDLLVSTGIHFLTSVSESGLYKGLFADENTLKSICEKIIIPNISLRESDEEVFEDNPEEWMRRDLEGSDIDTRRRSACDLVRGLSKFHQERVTAIFTAYVSAMFQQYSANPSQNWRSMDAAYYLITSLAARSRTTDRGTRETNALVDIPSLYEMHAAKDMQNQITGIPGAIIAADAIKFALTFRNQVTKNVLAASIPLFIAKLADPNIVVHSYAAHAIERALVIRQPGASELLFSTDEVRVYLEPLLGNLFKALGYQGSAENEYLMR # PASA_UPDATE: g4620.t1, single gene model update, valid-1, status:[pasa:asmbl_3883,status:12], valid-1 NODE_2251_length_7079_cov_39.6838 . gene 210 2945 . - . ID=g4620;Name=g4620.t1 NODE_2251_length_7079_cov_39.6838 . mRNA 210 2945 . - . ID=g4620.t1;Parent=g4620;Name=g4620.t1 NODE_2251_length_7079_cov_39.6838 . five_prime_UTR 2777 2945 . - . ID=g4620.t1.utr5p1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 2683 2945 . - . ID=g4620.t1.exon1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 2683 2776 . - 0 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 2397 2549 . - . ID=g4620.t1.exon2;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 2397 2549 . - 2 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 1884 2062 . - . ID=g4620.t1.exon3;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 1884 2062 . - 2 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 1384 1520 . - . ID=g4620.t1.exon4;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 1384 1520 . - 0 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 818 1046 . - . ID=g4620.t1.exon5;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 818 1046 . - 1 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 489 576 . - . ID=g4620.t1.exon6;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 489 576 . - 0 ID=cds.g4620.t1;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . exon 210 308 . - . ID=g4620.t1.exon7;Parent=g4620.t1 NODE_2251_length_7079_cov_39.6838 . CDS 210 308 . - 2 ID=cds.g4620.t1;Parent=g4620.t1;3_prime_partial=true #PROT g4620.t1 g4620 MSSDIKTIYVSINGKPETVEFCVKDGGEAISDAFRSAAEAAPDAILKLRNVTGAIVGFSPNITENTPDSRYTLEVVADSSISDAGAPKKVGQLLRSYNFTTSDVEDKLERIEKKLRKTGHTGATAEVASLKNELDRIRDKLEGLEHLSWLGLFKKYPSTPVRPKTGTRKSRKDCEAIYEKFRNFDGIRISAEAREYLRNPTFNNWQWDDSEMLFLLQLMFEELGLIEKFKIEVETLKNFLVRVHQNYNNNPFHNFKHCFCVSQMMYGLISLTHLYEHMPDYEILVLLFSAVCHDLDHPGLNNAYQINARTELAIRYNDASPLENHH # PASA_UPDATE: g4621.t1, single gene model update, valid-1, status:[pasa:asmbl_3884,status:3], valid-1 NODE_2251_length_7079_cov_39.6838 . gene 3598 6129 . + . ID=g4621;Name=g4621.t1 NODE_2251_length_7079_cov_39.6838 . mRNA 3598 6129 . + . ID=g4621.t1;Parent=g4621;Name=g4621.t1 NODE_2251_length_7079_cov_39.6838 . five_prime_UTR 3598 3716 . + . ID=g4621.t1.utr5p1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . exon 3598 4205 . + . ID=g4621.t1.exon1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . CDS 3717 4205 . + 0 ID=cds.g4621.t1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . exon 4307 4535 . + . ID=g4621.t1.exon2;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . CDS 4307 4535 . + 0 ID=cds.g4621.t1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . exon 4857 5029 . + . ID=g4621.t1.exon3;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . CDS 4857 5029 . + 2 ID=cds.g4621.t1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . exon 5241 5387 . + . ID=g4621.t1.exon4;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . CDS 5241 5387 . + 0 ID=cds.g4621.t1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . exon 5670 6129 . + . ID=g4621.t1.exon5;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . CDS 5670 6017 . + 0 ID=cds.g4621.t1;Parent=g4621.t1 NODE_2251_length_7079_cov_39.6838 . three_prime_UTR 6018 6129 . + . ID=g4621.t1.utr3p1;Parent=g4621.t1 #PROT g4621.t1 g4621 MILIGALSASVARRMSPPAVRSLALRSLATQSRPTVTVNGRTYALPKAGTPLVGICIDGCSRDYIDAALAAGAMPNLLASLCRPVVDRAAIGTVDTVMPTFTNPNNVAIVTGTTPDVNGICGNYFIDDAGKEVMMNDPAFLQVPTILSKMSESGVRVVVLTAKDKLLRLLSKGMDKATGIAVSVEKCREKESLDTLSATLGVTGGLEAIVGSAAPTIYQPNISVYLIEAGARILQRLKQDGQPTIMYLSTTDYVQHKYPPGSEGANAFYTGLDNAIASLENEGAVVAFTADHGMNSKTDAKGRPNAIYLETLLGDHGIANKTILPITDPYVVHHGALGSYATVYLEDASEEKVATALSLIRKQRGVHVAHPKAEAARLYSLPQQRIGDIVVVGDRNTVLGRTLAYHDLTGVENLRSHGGLEESRVPLYVSRPLQEGHASRLYSSEAHNWDLFDFLCNGPRE* # ORIGINAL: g757.t1 original gene structure, not modified by PASA NODE_2851_length_4968_cov_66.3264 AUGUSTUS gene 3297 4055 . + . ID=g757;Name=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS mRNA 3297 4055 . + . ID=g757.t1;Parent=g757;Name=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS exon 3297 3370 . + . ID=g757.t1.exon1;Parent=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS CDS 3297 3370 . + 0 ID=cds.g757.t1;Parent=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS exon 3467 3600 . + . ID=g757.t1.exon2;Parent=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS CDS 3467 3600 . + 1 ID=cds.g757.t1;Parent=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS exon 3700 4055 . + . ID=g757.t1.exon3;Parent=g757.t1 NODE_2851_length_4968_cov_66.3264 AUGUSTUS CDS 3700 4055 . + 2 ID=cds.g757.t1;Parent=g757.t1 #PROT g757.t1 g757 MGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMGPPKDCPKLAYATMEACWRKHAETRPQFSQLILQLQRGMATLCGIEGGGGVSGSNVELDANGTDGLSGAVEHSETYALTVPEDAYAEVKPEVGSVHPLQNLMFQTDSTA* # PASA_UPDATE: g6082.t1, single gene model update, valid-1, status:[pasa:asmbl_5218,status:12], valid-1 NODE_2905_length_4784_cov_42.5672 . gene 1 739 . - . ID=g6082;Name=g6082.t1 NODE_2905_length_4784_cov_42.5672 . mRNA 1 739 . - . ID=g6082.t1;Parent=g6082;Name=g6082.t1 NODE_2905_length_4784_cov_42.5672 . five_prime_UTR 382 739 . - . ID=g6082.t1.utr5p1;Parent=g6082.t1 NODE_2905_length_4784_cov_42.5672 . exon 1 739 . - . ID=g6082.t1.exon1;Parent=g6082.t1 NODE_2905_length_4784_cov_42.5672 . CDS 1 381 . - 0 ID=cds.g6082.t1;Parent=g6082.t1;3_prime_partial=true #PROT g6082.t1 g6082 MQSNETDAPHSALPATPRTSRRLRGDPAKFQPLDRIPRHPILNNPPNMDPPAVANAQAPPLPANPDGLAVEGNAANAPAPLAPVVPPQPAPQAAAPIQMPLPADFAAAVLQVVGAPLQAVNATLAAI # PASA_UPDATE: g1536.t1, single gene model update, valid-1, status:[pasa:asmbl_6536,status:12], valid-1 NODE_3780_length_2770_cov_37.2508 . gene 257 2458 . - . ID=g1536;Name=g1536.t1 NODE_3780_length_2770_cov_37.2508 . mRNA 257 2458 . - . ID=g1536.t1;Parent=g1536;Name=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 2101 2458 . - . ID=g1536.t1.exon1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 2101 2458 . - 0 ID=cds.g1536.t1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 1854 1991 . - . ID=g1536.t1.exon2;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 1854 1991 . - 2 ID=cds.g1536.t1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 1431 1510 . - . ID=g1536.t1.exon3;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 1431 1510 . - 2 ID=cds.g1536.t1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 1033 1146 . - . ID=g1536.t1.exon4;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 1033 1146 . - 0 ID=cds.g1536.t1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 752 889 . - . ID=g1536.t1.exon5;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 752 889 . - 0 ID=cds.g1536.t1;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . exon 257 420 . - . ID=g1536.t1.exon6;Parent=g1536.t1 NODE_3780_length_2770_cov_37.2508 . CDS 257 420 . - 0 ID=cds.g1536.t1;Parent=g1536.t1;3_prime_partial=true #PROT g1536.t1 g1536 MAASREIEVISLDDVDNGTPSRSAAQRPPPVATFRHHNANKQQITSTLTLENVAQYASFDDLLASVSVVTGIPVGGMTLLSPAGRQFTSATDTVASFAELIRNTRSLVINIFRSDWKDGADGLLVAVHPFAAETFFVRMDVTPKVHVFEHQTRDLTYYTALTELIENAIEGTLGIPANIKRRITIKIDKSSKTIEIEDNGAGMSDDVMSTLGQLGATSHMVDLTNDDTLEEKHVTSEFGKYGIGRCAVVKFGPDICATWESRVIGSSCVTRVKFDYKQMNKDGMLSLSDRAQMRAHEIGCVKEHYTKLVIEHVEDRFFADWESSVDGYIP # PASA_UPDATE: g13783.t1, single gene model update, valid-1, status:[pasa:asmbl_2457,status:3], valid-1 NODE_172_length_33484_cov_41.9543 . gene 18042 20028 . + . ID=g13783;Name=g13783.t1 NODE_172_length_33484_cov_41.9543 . mRNA 18042 20028 . + . ID=g13783.t1;Parent=g13783;Name=g13783.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 18042 18117 . + . ID=g13783.t1.utr5p1;Parent=g13783.t1 NODE_172_length_33484_cov_41.9543 . exon 18042 18234 . + . ID=g13783.t1.exon1;Parent=g13783.t1 NODE_172_length_33484_cov_41.9543 . CDS 18118 18234 . + 0 ID=cds.g13783.t1;Parent=g13783.t1 NODE_172_length_33484_cov_41.9543 . exon 18531 20028 . + . ID=g13783.t1.exon2;Parent=g13783.t1 NODE_172_length_33484_cov_41.9543 . CDS 18531 19226 . + 0 ID=cds.g13783.t1;Parent=g13783.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 19227 20028 . + . ID=g13783.t1.utr3p1;Parent=g13783.t1 #PROT g13783.t1 g13783 MADICRDFLVGRCFRTKCKFAHTLPEGHAMMHTMQPPQQICRDYELGRCFRTRCRYYHPPPSEMASTASPLPYDPLQLNPHATQQQICYDFLSTSTCRRMQEGSICRFRHLHPTHPEAIAERQRRLQQANAAAAAAAHGHGQGVNVGVGPFGGIYQSPFGGYGLGPGSAQAFVPAMYGATGLGGFLPQSLYAADAFGTAGLGSLTGATNGAGSNFGGSAATGAASPTPAAAVVGMGLAPGSGVPNGIGGGSPPQSGDFSAGSQQALFQSS* # PASA_UPDATE: g13785.t1, single gene model update, valid-1, status:[pasa:asmbl_2458,status:12], valid-1 NODE_172_length_33484_cov_41.9543 . gene 22611 25179 . + . ID=g13785;Name=g13785.t1 NODE_172_length_33484_cov_41.9543 . mRNA 22611 25179 . + . ID=g13785.t1;Parent=g13785;Name=g13785.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 22611 22744 . + . ID=g13785.t1.utr5p1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 22611 22809 . + . ID=g13785.t1.exon1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 22745 22809 . + 0 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 23195 23530 . + . ID=g13785.t1.exon2;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 23195 23530 . + 1 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 23922 24029 . + . ID=g13785.t1.exon3;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 23922 24029 . + 1 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 24157 24162 . + . ID=g13785.t1.exon4;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 24157 24162 . + 1 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 24469 24476 . + . ID=g13785.t1.exon5;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 24469 24476 . + 1 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 24691 24722 . + . ID=g13785.t1.exon6;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 24691 24722 . + 2 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . exon 25003 25179 . + . ID=g13785.t1.exon7;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . CDS 25003 25044 . + 0 ID=cds.g13785.t1;Parent=g13785.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 25045 25179 . + . ID=g13785.t1.utr3p1;Parent=g13785.t1 #PROT g13785.t1 g13785 MAGKAGEIPPAYSQGNMAPGQGYPPEQGYPPQPQQGYAAPPSPQPPHAQPQGYPPQQGYPPQQGYPPQQQQGYPPQQGYPPQQQQGYPPPGYQPQQGYPPKGAYPPQQGYPPQQQQGYPPQQQGYPPMGYPPQGYPQTQVTVVQTGYSAPAPNQVVVVRRNEVNHVLHAIITLFFWPWAIVWLILCLTEDTTTTVVQR* # PASA_UPDATE: g13787.t1, single gene model update, valid-1, status:[pasa:asmbl_2459,status:12], valid-1 NODE_172_length_33484_cov_41.9543 . gene 31731 33284 . + . ID=g13787;Name=g13787.t1 NODE_172_length_33484_cov_41.9543 . mRNA 31731 33284 . + . ID=g13787.t1;Parent=g13787;Name=g13787.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 31731 31768 . + . ID=g13787.t1.utr5p1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 31893 31936 . + . ID=g13787.t1.utr5p2;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 31731 31768 . + . ID=g13787.t1.exon1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 31893 31978 . + . ID=g13787.t1.exon2;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . CDS 31937 31978 . + 0 ID=cds.g13787.t1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 32217 32261 . + . ID=g13787.t1.exon3;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . CDS 32217 32261 . + 0 ID=cds.g13787.t1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 32386 32520 . + . ID=g13787.t1.exon4;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . CDS 32386 32520 . + 0 ID=cds.g13787.t1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 32683 32847 . + . ID=g13787.t1.exon5;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . CDS 32683 32847 . + 0 ID=cds.g13787.t1;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . exon 33078 33284 . + . ID=g13787.t1.exon6;Parent=g13787.t1 NODE_172_length_33484_cov_41.9543 . CDS 33078 33284 . + 0 ID=cds.g13787.t1;Parent=g13787.t1 #PROT g13787.t1 g13787 MDQYNGSTMELMPNGGRQSTASHNDVNLSIAQVRMSSVSMSGEDRERFSDPSAYVDYVLVVERKHRGNRTFRAKFIEALKAEPNHFEVEISDSSDSTGSENGDVFIKLHAPFETLCREAEIIRMNMLLKKELSLEERRQPSILSRGMNALFGTENAPLTSFAAPFKSDKLHLYKGSDNKDTFFAPAKRSLLVSGRDD* # PASA_UPDATE: g13782.t1, single gene model update, valid-1, status:[pasa:asmbl_2464,status:3], valid-1 NODE_172_length_33484_cov_41.9543 . gene 16046 17097 . - . ID=g13782;Name=g13782.t1 NODE_172_length_33484_cov_41.9543 . mRNA 16046 17097 . - . ID=g13782.t1;Parent=g13782;Name=g13782.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 16963 17097 . - . ID=g13782.t1.utr5p1;Parent=g13782.t1 NODE_172_length_33484_cov_41.9543 . exon 16725 17097 . - . ID=g13782.t1.exon1;Parent=g13782.t1 NODE_172_length_33484_cov_41.9543 . CDS 16725 16962 . - 0 ID=cds.g13782.t1;Parent=g13782.t1 NODE_172_length_33484_cov_41.9543 . exon 16046 16589 . - . ID=g13782.t1.exon2;Parent=g13782.t1 NODE_172_length_33484_cov_41.9543 . CDS 16297 16589 . - 2 ID=cds.g13782.t1;Parent=g13782.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 16046 16296 . - . ID=g13782.t1.utr3p1;Parent=g13782.t1 #PROT g13782.t1 g13782 MAAIVRASSLLAGRMSTTAAIVCIQQARVQALPCSVRAAAAYTTQAQASSRKAALLDAHAEAKEAINEAVNARFSVYFDDTYKDAVEAVQSATRMLEAARQTLKVTPDADFVALMDSRLNELQAALRGLTSLTEVSHGGCENGCCCHRAGKAASSASSASDHSHNHKHDTHHAVSA* # PASA_UPDATE: g13779.t1, single gene model update, valid-1, status:[pasa:asmbl_2461,status:3], valid-1 NODE_172_length_33484_cov_41.9543 . gene 2482 5179 . - . ID=g13779;Name=g13779.t1 NODE_172_length_33484_cov_41.9543 . mRNA 2482 5179 . - . ID=g13779.t1;Parent=g13779;Name=g13779.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 5010 5179 . - . ID=g13779.t1.utr5p1;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . exon 4912 5179 . - . ID=g13779.t1.exon1;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . CDS 4912 5009 . - 0 ID=cds.g13779.t1;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . exon 3696 4643 . - . ID=g13779.t1.exon2;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . CDS 3696 4643 . - 1 ID=cds.g13779.t1;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . exon 2482 3577 . - . ID=g13779.t1.exon3;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . CDS 2680 3577 . - 1 ID=cds.g13779.t1;Parent=g13779.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 2482 2679 . - . ID=g13779.t1.utr3p1;Parent=g13779.t1 #PROT g13779.t1 g13779 MCWSRDDQAGPRVAGPAAHALLGEFGAVDYLSQFDGQGMDMPMMASDRGIIAEMPSSKQPAAGLASLFGESENFDLLLDYCGGDEISCDQVPGGRPNNLHAMVQQQQQQQIRPAVQLQPQWSATDLLLSCEPFLAEAGSPATDGAKFDVALEQQDLWTEFHKHTTEMILTRNGRCLFPTPKLRMNALPAYGIFSIMLEFVPVSDIRWKYNGKEWVEAGKISKPLLTTVYTHPDSPNTGSHWMSQEVNFSKVKITNSLNNEGXXXXXXXXXXXXXXXXXXXXXXXXXXXSVETRVFPDTEFIAVTVYQSDMIRHLKKRSNPHASLHGEDDVDSERSEMVAVPCGKRPLDDDAYTTVAKRARMEASPVQAVPVTMPFNFNGDNSDSAQLTSWLLSASDNVLGSCDNLFADGFDRLAVAGAEVSASMENVNAPLHHALRNQLPQMFFPSEDDVKPVVNCKPQVPAGMSVSLCEPELWTEFHKSTTEMILTRNGRCLFPTPKLRMNALPAYGLFSVMLEFVPIGDTRWKYNGKEWVEAGKISKPLLTTVYTHPDSPNTGSHWMSQEVNFSKVKITNSLNNEGHIMLNSFQKYEPRFHIVSLDPVTHQPLSVETRVFPDTEFIAVTVYQNDSIRHLKKTSNPRAYKAEHCEV* # PASA_UPDATE: g13781.t1, single gene model update, valid-1, status:[pasa:asmbl_2469,status:12], valid-1 NODE_172_length_33484_cov_41.9543 . gene 10374 16046 . + . ID=g13781;Name=g13781.t1 NODE_172_length_33484_cov_41.9543 . mRNA 10374 16046 . + . ID=g13781.t1;Parent=g13781;Name=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 10374 10460 . + . ID=g13781.t1.exon1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 10374 10460 . + 0 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 10563 10723 . + . ID=g13781.t1.exon2;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 10563 10723 . + 0 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 10907 10973 . + . ID=g13781.t1.exon3;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 10907 10973 . + 1 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 11262 11611 . + . ID=g13781.t1.exon4;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 11262 11611 . + 0 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 11868 13506 . + . ID=g13781.t1.exon5;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 11868 13506 . + 1 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . exon 13717 16046 . + . ID=g13781.t1.exon6;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . CDS 13717 16041 . + 0 ID=cds.g13781.t1;Parent=g13781.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 16042 16046 . + . ID=g13781.t1.utr3p1;Parent=g13781.t1 #PROT g13781.t1 g13781 MAHRDPSSSVTPPNNRQTTHVIVDVAGHVFIISSLSSRSDVLVCAIDAVSGSLTHDGHDGIDVFKSEAEALSRVDPRSTGTRKRVPALLGYTVHGAQGHLLVATKLRRLQAHGSHVVSCVDASAWIRCPLLCRDSGGRREGLLIASLRSYPMDGCHYFSETIDLTRPHIPCGESFPSHGRESAPEFVWNAHLASPFVAIGLADCCRPLLHGVVHAGSVKGEGDVFVRYLFLTRRSSRSPYPSAVARGMSKDGGVANESECELCFWTSEEYASETKVGDVPQGRPSTWVDFRSVVFRKGTAPVVYADPSSQQYTTSAPGDSPANAPLNGGEADGGSGLGDHVRGVLRRFAMQRMAFVSLLRGGGVTSVTLERAVAKLRRELRAELALVRYDWELTCSLLGGMAGAMEGLWEIARGVCRDMGMFGARMEMGPVDERQDASPACVSARTEQQWTVSILCENGINATSLAGLALACNSAASAVASLGFVPARETPSASPSTRRSNAQHAPVPIAVRAPEGIPIVLANTLGHGFLYAIAQFLAADADQSSRAYELHGNPALADSLKRMAAGVPQDQQSIPHALSVSSPQRDSVHHGQQHSSGDTHSHTHSHAGANTHDHDASANRIEAISRCEQIDVILGRRLVELLPSYAHPQAQPPHLISMLPGAFCIDLEPIPLTTSEGATIPADAMLLPPGWGSTTVGTSGSQSSLSPWTFYMAPPGCDRVAVTVSLSTAAHVTALALWIRHGECDVTSPQTMDFYVGTHADTLEPVLQDIQLPYCRDGTRICYSIPSPASVRVVDPPVLFRFGADHTRRPPSRFARVILRGGPVQAQLTLGAVEVYGVRAPSPLDPMDASSSGHLVATPRTVDVSTSLDVLLARSDATNIGIPPAIRSKSFDYRTIGQGPPSVGGTAAGRASAHDAAPRSVTFGDLSPMVMRRVPLLDLEGPSGVTDRRLFARLPSLEGHLDEDAAAHIDQYARHVSNRVSEVSTLTFYDTLILEKERLRLGVTPAQRASVLSQLGIRESLLDPNRFVYRKDDGGKAISAGAQQHGTAATGSSVLSGPFSSFLSPSSTPSSPSGGPSAFQVASALSPSSLLARGRVPTCHGCKSALPNGTPMTCRYCSRNFCDRCMHPDACTIIEHCADRQTVCVSCRALVDKQQECLDEIARLIVTAEARERRSVIACALPYATADDADDADDALALGSAYTDSCGKAGRPRRMDAADEWSLAEHPRASLVYAVPSDMRSPPPECVLLPPDGPSPSGLSWIGPVGSHRAEFVVALSAKSLVRRVDIIAGAHGFRSGAVPAINVRTGSLAADIASSSVCRKVPSPSEQLAGVGPYGLVSIIFPSPVICRVVSICIEVPTVQDGGATLASGTAVSTAAASSGGGTFASRLSVGRIRVIGEPTAHSHRTTSLSVVDSAREDAKAVTRNHVKPLQTAYRQGGRLCDLTIDPMFLVGFSVIARHSQGSPLSQVRLVRVTVVGRVGPKAELSERTVGVFVVPLTSQGTHLFFDVEDMGTGSLVTFEALASHGASTMCVPLKVAVYTG* # PASA_UPDATE: g13784.t1, single gene model update, valid-1, status:[pasa:asmbl_2465,status:12],[pasa:asmbl_2471,status:12], valid-1 NODE_172_length_33484_cov_41.9543 . gene 20306 21492 . - . ID=g13784;Name=g13784.t1 NODE_172_length_33484_cov_41.9543 . mRNA 20306 21492 . - . ID=g13784.t1;Parent=g13784;Name=g13784.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 21441 21492 . - . ID=g13784.t1.utr5p1;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . exon 21376 21492 . - . ID=g13784.t1.exon1;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . CDS 21376 21440 . - 0 ID=cds.g13784.t1;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . exon 21175 21242 . - . ID=g13784.t1.exon2;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . CDS 21175 21242 . - 1 ID=cds.g13784.t1;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . exon 20306 20970 . - . ID=g13784.t1.exon3;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . CDS 20657 20970 . - 2 ID=cds.g13784.t1;Parent=g13784.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 20306 20656 . - . ID=g13784.t1.utr3p1;Parent=g13784.t1 #PROT g13784.t1 g13784 MAQSAADIAHLVAEAHKAKITAYCPYSNFRVGAALLTEDGKIYLGCNVENSSYGLAICAERTAYVKAVSEGHRKFRAIAVATDVQNKYCSPCGACRQFMAEFGLETALYLSKPDLTFQMYTVGDLIPLAFTPEHLKELRIDPAVAPPS* # PASA_UPDATE: g13778.t1, single gene model update, valid-1, status:[pasa:asmbl_2456,status:3], valid-1 NODE_172_length_33484_cov_41.9543 . gene 474 2412 . + . ID=g13778;Name=g13778.t1 NODE_172_length_33484_cov_41.9543 . mRNA 474 2412 . + . ID=g13778.t1;Parent=g13778;Name=g13778.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 474 549 . + . ID=g13778.t1.utr5p1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 474 582 . + . ID=g13778.t1.exon1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 550 582 . + 0 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 696 836 . + . ID=g13778.t1.exon2;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 696 836 . + 0 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 993 1116 . + . ID=g13778.t1.exon3;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 993 1116 . + 0 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 1254 1408 . + . ID=g13778.t1.exon4;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 1254 1408 . + 2 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 1603 1825 . + . ID=g13778.t1.exon5;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 1603 1825 . + 0 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 2005 2131 . + . ID=g13778.t1.exon6;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 2005 2131 . + 2 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . exon 2283 2412 . + . ID=g13778.t1.exon7;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . CDS 2283 2361 . + 1 ID=cds.g13778.t1;Parent=g13778.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 2362 2412 . + . ID=g13778.t1.utr3p1;Parent=g13778.t1 #PROT g13778.t1 g13778 MPINLEEVAAQFKKNGLTFIPDFFCDEDCDNMRAQIEKILDEFDMKDHPRTVFSTVNQKTDDYFLNSGDKIRFFFEEAAFNEKNELTVAKDCAINKIGHALHVLDPVFHEMTTRQSIQDVARAIGFRKPLVAQSMYIFKQPNIGGEVVPHQDSTFLHTDPPSILGFWIALEDCTKHNGCLWYIPESQKIGLTRRMIRTPDNLGTTFTAPAPTFEEDSFVAAEVKKGTLVLIHGEVIHRSGPNFSDKSRHIYTFHALESDGPKYSPDNWLLPSKEIPFMPLFTEDKSSDAPTKA* # PASA_UPDATE: g13786.t1, single gene model update, valid-1, status:[pasa:asmbl_2472,status:12], valid-1 NODE_172_length_33484_cov_41.9543 . gene 25348 31169 . - . ID=g13786;Name=g13786.t1 NODE_172_length_33484_cov_41.9543 . mRNA 25348 31169 . - . ID=g13786.t1;Parent=g13786;Name=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 31050 31169 . - . ID=g13786.t1.exon1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 31050 31169 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 30747 30829 . - . ID=g13786.t1.exon2;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 30747 30829 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 30180 30504 . - . ID=g13786.t1.exon3;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 30180 30504 . - 1 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 29458 29640 . - . ID=g13786.t1.exon4;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 29458 29640 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 28974 29170 . - . ID=g13786.t1.exon5;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 28974 29170 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 28520 28734 . - . ID=g13786.t1.exon6;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 28520 28734 . - 1 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 27979 28187 . - . ID=g13786.t1.exon7;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 27979 28187 . - 2 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 27266 27760 . - . ID=g13786.t1.exon8;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 27266 27760 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 26335 27042 . - . ID=g13786.t1.exon9;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 26335 27042 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . exon 25348 26117 . - . ID=g13786.t1.exon10;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . CDS 25518 26117 . - 0 ID=cds.g13786.t1;Parent=g13786.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 25348 25517 . - . ID=g13786.t1.utr3p1;Parent=g13786.t1 #PROT g13786.t1 g13786 MADDDSMPSMQTLELLGDVKGHETLDTFIPFSNLCLLLERINAQNRKKHALEKKRALIESYFKMYRERARGGKEDSLYPIVRLLLPHLDRERSAYGIKEQTLAKYYIEQLAIPKGSVDAQKLLYWKKPDVVKADLAGDFASVVSLVLKNRCPSKGTLSVKGVNAALDALAEANALQNREKTRTALVGMLRETTAEEQKWLVRIIMKDLKISLGDKTVLANLHPDAFHLYSITSSLKEVCDELWDVNVRIAEREVSLFRPFKPQLSERAKISEVTQKMGRQPFVMEIKYDGDRMQMHKDGDVYRWYSRNSNDFTNIYGDGPHVGTLTQFIHGAFKPSVRRAILDGEMVGYNPSEETIVSKSLIDVKTVGRDGDDGENIRPCFVVFDVLMINDESLGKLPLSERFDRLKDVFDHVPGRMMVSERRVGESVQDVIEAINAAIDAQEEGIVIKDPRAAYQCDAREGSGWLKIKPEYVDVLTDSMDLLIVGGYLGTGIRRGGMISHFLLGLAVPPEAMDDEPDTRLAPEMLIGGDAGTCPAIVSGGSAAGGAGPIADATSGNGGQSNGRAMDIPEERFDKDVAVSDDDDFMMDGDGVVKLTPAKLPVEFFSFTKVGSGYTMHELEQLLQHLKPHWKRYDTNNPPACIKLADGFKERPDFWIHPSQSRVVQIKAAEIIPSDRFAVGYTLRFPRLERIRYDKEWWESMDVTEFDALRRTANGRLASSRFAEGDDDGDFKRKGRRKGGRGAAHVAEQFRIADVSKVEIQSTMFDGMEFSVVSDGASLKKGAMELLIASHGGRCVANPSDTTDIVVVGKMTMPARLAIERACHDVVAEHWLLDSVEQGARFPMSPKYLFSAKPETRQGMLLASDRFGDSFTEDATVASLAESFEMVDKLQRTSGAAFWIQSRDCLDDALTAVPALRLSTAEMADIEQEHFGASFDGIGLFRGWRLYVDDCVALDDASTRDPLSPLAILVRRRAVLYGAALVDSIAEATHIVVDAGNVARVPAIRDRLRTAVHRRPRLVLGEWVQQSIHEATLLPEERFSVPAH* # PASA_UPDATE: g13780.t1, single gene model update, valid-1, status:[pasa:asmbl_2468,status:3], valid-1 NODE_172_length_33484_cov_41.9543 . gene 7175 8007 . + . ID=g13780;Name=g13780.t1 NODE_172_length_33484_cov_41.9543 . mRNA 7175 8007 . + . ID=g13780.t1;Parent=g13780;Name=g13780.t1 NODE_172_length_33484_cov_41.9543 . five_prime_UTR 7175 7236 . + . ID=g13780.t1.utr5p1;Parent=g13780.t1 NODE_172_length_33484_cov_41.9543 . exon 7175 8007 . + . ID=g13780.t1.exon1;Parent=g13780.t1 NODE_172_length_33484_cov_41.9543 . CDS 7237 7908 . + 0 ID=cds.g13780.t1;Parent=g13780.t1 NODE_172_length_33484_cov_41.9543 . three_prime_UTR 7909 8007 . + . ID=g13780.t1.utr3p1;Parent=g13780.t1 #PROT g13780.t1 g13780 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKSQCTMEGCADRPVMLVGDCKYCQGKFCGKHRLPETHACAQMDACRKQAFDKNASKLQNERTGASKVIRV* # ORIGINAL: g2910.t1 original gene structure, not modified by PASA NODE_5445_length_847_cov_42.5492_potentialcontaminant AUGUSTUS gene 2 847 . + . ID=g2910;Name=g2910.t1 NODE_5445_length_847_cov_42.5492_potentialcontaminant AUGUSTUS mRNA 2 847 . + . ID=g2910.t1;Parent=g2910;Name=g2910.t1 NODE_5445_length_847_cov_42.5492_potentialcontaminant AUGUSTUS exon 2 847 . + . ID=g2910.t1.exon1;Parent=g2910.t1 NODE_5445_length_847_cov_42.5492_potentialcontaminant AUGUSTUS CDS 2 847 . + 0 ID=cds.g2910.t1;Parent=g2910.t1 #PROT g2910.t1 g2910 ERRAHTGEALTVKRVDTVDMASGDTFKYILGDETPLTVLPYPATAHPHHNNATNDYLKRHLAEGGSSHWIQTIELFKRAFIFVYTDVSYLAMMIISHLFFAVIVGIIFNNLTDNFTGMQDRIGLLFMCSTNICFSHSNFALNRFRSGKLLYIREQQVGAYSPFLYFIANFIADIPIIAFSILLQCIIVYFATGLYNSAGAFFYFFAVLNCCSLASFGLGAMVGAAFDNEFVATAAIPMLQIPMLMCGGLLADNDQVRPYFIWMEKISMHRYGALLLFHNEFR # ORIGINAL: g9251.t1 original gene structure, not modified by PASA NODE_4061_length_2256_cov_34.7675 AUGUSTUS gene 183 2121 . - . ID=g9251;Name=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS mRNA 183 2121 . - . ID=g9251.t1;Parent=g9251;Name=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS exon 1921 2121 . - . ID=g9251.t1.exon1;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS CDS 1921 2121 . - 0 ID=cds.g9251.t1;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS exon 1212 1420 . - . ID=g9251.t1.exon2;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS CDS 1212 1420 . - 0 ID=cds.g9251.t1;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS exon 804 918 . - . ID=g9251.t1.exon3;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS CDS 804 918 . - 1 ID=cds.g9251.t1;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS exon 183 362 . - . ID=g9251.t1.exon4;Parent=g9251.t1 NODE_4061_length_2256_cov_34.7675 AUGUSTUS CDS 183 362 . - 0 ID=cds.g9251.t1;Parent=g9251.t1 #PROT g9251.t1 g9251 MGEFDEAAKHCRRILGTDADLWDKWIFHFAKCNQLKTISYYIPIENPRLGSTVYEMVLNSFINSDIEVLKKTVLAWPATLYNIETVIIAVEARLKVRPTDNTLLETLAELYTKAGKFGQALEMHLRRRSGDVFTLIKTQNLFSAVQNRIVLLMDFNLTEAVAMLVNNIESVPMKLVVDQLQGHRKLLHAYLDGLFAKDNEIGRDYQETQVELYAEFEPAKLLNFLRESNYYSPEK # ORIGINAL: g6449.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 4981 6164 . + . ID=g6449;Name=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 4981 6164 . + . ID=g6449.t1;Parent=g6449;Name=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 4981 5256 . + . ID=g6449.t1.exon1;Parent=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 4981 5256 . + 0 ID=cds.g6449.t1;Parent=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 5368 5817 . + . ID=g6449.t1.exon2;Parent=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 5368 5817 . + 0 ID=cds.g6449.t1;Parent=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 5973 6164 . + . ID=g6449.t1.exon3;Parent=g6449.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 5973 6164 . + 0 ID=cds.g6449.t1;Parent=g6449.t1 #PROT g6449.t1 g6449 MAPLCVRPVQSTEGKAALLAVLDAHVPRSHALRAILRHDASAPWGFFELQLYAACEAATECVPSTSSHAQVGVDSASARAMVAIIHYPHSGMHGVYTFAIDAASLEPLLEEGACFSWRCRTVFAAMQGAYTHVVESASLINRRPLEITPCVMYLLRSIDTLPRLDAASIHPARIGPLTEAHAEIVNKHWPYGSASTEINVRRSITCFGGAGVFVGDEPVAWAVFQPYGAIGMVHTMDDHRRKGYGSAAVRALIDNIRDGATPIDAAFCYIVRGNDASVSMMTSLGFEEVANDSHDWWVPVNSPSD* # ORIGINAL: g6448.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 304 4151 . - . ID=g6448;Name=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 304 4151 . - . ID=g6448.t1;Parent=g6448;Name=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 4094 4151 . - . ID=g6448.t1.exon1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 4094 4151 . - 0 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 3749 3787 . - . ID=g6448.t1.exon2;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 3749 3787 . - 2 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 3453 3561 . - . ID=g6448.t1.exon3;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 3453 3561 . - 2 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 2993 3126 . - . ID=g6448.t1.exon4;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 2993 3126 . - 1 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 2345 2793 . - . ID=g6448.t1.exon5;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 2345 2793 . - 2 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 2054 2145 . - . ID=g6448.t1.exon6;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 2054 2145 . - 0 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 1770 1941 . - . ID=g6448.t1.exon7;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 1770 1941 . - 1 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 1342 1599 . - . ID=g6448.t1.exon8;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 1342 1599 . - 0 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 712 1102 . - . ID=g6448.t1.exon9;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 712 1102 . - 0 ID=cds.g6448.t1;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 304 413 . - . ID=g6448.t1.exon10;Parent=g6448.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 304 413 . - 2 ID=cds.g6448.t1;Parent=g6448.t1 #PROT g6448.t1 g6448 MAQRALVSTAPAVWRIKLTVISAYGLKNGGLLQTPNPFARISVDLDNQLYSTSICKRTTLPKWQQAFEVAVAPSSVVEVTLFNNRKFKKRVGAGFLGYATISMAQFTPFANMMETLTLPLRRRSEDDDPVTGYIVVGLSSGTMIASESSGSSSRRRNTASAIPSGPSAYASSTMPRGVLVGGTIPAIRSASLGAAGLPAPATVGHVRQGRASIAGVMMNAPSPPPSTPSQMTTLNAQLPSGWEARVAPSGRVYYCNHATRTTQWERPRVSTVEEGRTLEAQASGQGSRAYYNNRSTLVPQQGALPPGWEQRTTPEGQVYFVDYNTRTSTWNDPRIPESTVAAAPAQQNLGPIPQGWEQRATPDGRVYFVDHNTRTTQFADPRLQLLMASLAADGGSSAPGPQFVTRDVKQKLADVRSQLRMQPGQCTIPVRRTSIFEDSYAGVMKLTGEGLKRRLTIKFADEEGLDYGGVSREWFYLLSREMLNPYYGLFQYSRTDLYTLQINPDSGINPDHLSYFHFVGRVLGMALFHGFYIDGGFTMPLYKLMVGRKPALADMALIDPEFHRSLTWMLENDIAGVLDDFTFSVDHEAFGERMTIDLKPMGR* # ORIGINAL: g6451.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 11441 14112 . - . ID=g6451;Name=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 11441 14112 . - . ID=g6451.t1;Parent=g6451;Name=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 13760 14112 . - . ID=g6451.t1.exon1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 13760 14112 . - 0 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 13352 13536 . - . ID=g6451.t1.exon2;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 13352 13536 . - 1 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 12957 13034 . - . ID=g6451.t1.exon3;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 12957 13034 . - 2 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 12638 12734 . - . ID=g6451.t1.exon4;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 12638 12734 . - 2 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 12335 12452 . - . ID=g6451.t1.exon5;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 12335 12452 . - 1 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 11931 12041 . - . ID=g6451.t1.exon6;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 11931 12041 . - 0 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 11637 11714 . - . ID=g6451.t1.exon7;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 11637 11714 . - 0 ID=cds.g6451.t1;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 11441 11515 . - . ID=g6451.t1.exon8;Parent=g6451.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 11441 11515 . - 0 ID=cds.g6451.t1;Parent=g6451.t1 #PROT g6451.t1 g6451 MFTMRAHVAVSLLSALVLLTSGLCSGNESQSNAYQAFEKAALEGNHTNNWALLVGVGARSVCTCMSHVSVIKSIVLQLGVIVVCTFLQHRNFLSGIQVGSSRFWFNYRHIANVVGLYRNIKRLGIPDSNIILMLAEGMACNPRNVHAGSVIDDIGQVDAVEIDYRNYDVTVENFVRVLTGRNSVGTPPSKRLLSDDRSNVFVYLSGHGGDGFFKFQDAEEISGRELADVFEQMHQKGRYGRLFFMMDTCQAATMTENFYSPNIVAVGSSRRGENSWGYLPDTRLGVALLDRFTYSTIRFAEKIHPGHGPSLAALMKSYDPGLLRSNIDIKTTEGFGPLSKVRVTDFLGSSRDVHLTPAAYVPDD* # PASA_UPDATE: g6456.t1, single gene model update, valid-1, status:[pasa:asmbl_4034,status:3], valid-1 NODE_231_length_30319_cov_40.0998 . gene 26047 27736 . + . ID=g6456;Name=g6456.t1 NODE_231_length_30319_cov_40.0998 . mRNA 26047 27736 . + . ID=g6456.t1;Parent=g6456;Name=g6456.t1 NODE_231_length_30319_cov_40.0998 . five_prime_UTR 26047 26222 . + . ID=g6456.t1.utr5p1;Parent=g6456.t1 NODE_231_length_30319_cov_40.0998 . exon 26047 26602 . + . ID=g6456.t1.exon1;Parent=g6456.t1 NODE_231_length_30319_cov_40.0998 . CDS 26223 26602 . + 0 ID=cds.g6456.t1;Parent=g6456.t1 NODE_231_length_30319_cov_40.0998 . exon 26709 27736 . + . ID=g6456.t1.exon2;Parent=g6456.t1 NODE_231_length_30319_cov_40.0998 . CDS 26709 27585 . + 1 ID=cds.g6456.t1;Parent=g6456.t1 NODE_231_length_30319_cov_40.0998 . three_prime_UTR 27586 27736 . + . ID=g6456.t1.utr3p1;Parent=g6456.t1 #PROT g6456.t1 g6456 MFSLMRNAVAWMRERANRGRSITIVLLGIDNAGKSTVLAALKDEDTDFITPTFGFNSEELRHGRFKLTVYDLGGGKNLRGLWTRYLSEVHGAIYVVDASDPTRLEESREALNAFIDDERFKGKPLLVLANKQDKEGAVSNSSVSKKLKLRGRESEGEPIFVQVCAAKRASAPPGEDAPPGPLDERITSGLEWLISTIRTRHDELTSRISKDVAVQQEKEKIERDQREAIANLRRKERLAEEAKAAEEAQAKENGGASSEESDRENHPNALNTIATPDKPAAKKHTRRSTKNDDIIEPPAAPTRAYSAKDMDEEPVNRKATSRRGKRSTLDGEDGVGDADAVGSRGESIELAERPPKQKRRPKSTVEADSTHDDPPNGDEQVDDHSQQQQNQQVSGDARSRTKGNRKRLSGAESNPQGP* # ORIGINAL: g6450.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 6325 9699 . - . ID=g6450;Name=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 6325 9699 . - . ID=g6450.t1;Parent=g6450;Name=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 9498 9699 . - . ID=g6450.t1.exon1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 9498 9699 . - 0 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 9258 9324 . - . ID=g6450.t1.exon2;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 9258 9324 . - 2 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 8694 8971 . - . ID=g6450.t1.exon3;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 8694 8971 . - 1 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 8291 8447 . - . ID=g6450.t1.exon4;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 8291 8447 . - 2 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 7616 7929 . - . ID=g6450.t1.exon5;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 7616 7929 . - 1 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 7383 7474 . - . ID=g6450.t1.exon6;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 7383 7474 . - 2 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 7027 7120 . - . ID=g6450.t1.exon7;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 7027 7120 . - 0 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 6786 6864 . - . ID=g6450.t1.exon8;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 6786 6864 . - 2 ID=cds.g6450.t1;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 6325 6556 . - . ID=g6450.t1.exon9;Parent=g6450.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 6325 6556 . - 1 ID=cds.g6450.t1;Parent=g6450.t1 #PROT g6450.t1 g6450 MNEANLRLAEGLVSANYIKQAGESLRSRENLVKVLLSQRRCPEDGWDDASIEHFIHEIAIMDSNNFVGNVGVGEREARIASSIVARRHFGMGHGIGRSGNISEVQPKAAGSSLVVRLTEYMVMDMLRLTGVRSAEACVLLPVATGMSIVLTLLALRKTRPDAKYVVWSRIDQKSCFKAILAAGLVPLSVSCVLEGDELRTDIRGIEAAIEAAGGPSLVACVITTTSCFAPRAPDKVVEVGEICGARDIPHIVNNAYGVQSSKCMHLIETALRSMRDHHRGGPSGALNSNPHSPHETSPAKWSRVDAFVQSTDKNFLVPVGGAIVAGMKQLVDAVAKTYPGRASGSPIMDVFITLLHLGSNGYKSLLADRKRLHTYFVEKMDAVAKKHGERMLSTPHNPISFAMTLSSIGEDATMFGSMLFSRCVSGTRVVDPRKSEITIEGHTFRGFGAHYDAYPTPYLTAAAALGITQTDIDTFIDRLDRTLAKTKDAHRPPQNISSDMPPAQ* # PASA_UPDATE: g6453.t1, single gene model update, valid-1, status:[pasa:asmbl_4033,status:12], valid-1 NODE_231_length_30319_cov_40.0998 . gene 16409 18513 . + . ID=g6453;Name=g6453.t1 NODE_231_length_30319_cov_40.0998 . mRNA 16409 18513 . + . ID=g6453.t1;Parent=g6453;Name=g6453.t1 NODE_231_length_30319_cov_40.0998 . five_prime_UTR 16409 16589 . + . ID=g6453.t1.utr5p1;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . exon 16409 16664 . + . ID=g6453.t1.exon1;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . CDS 16590 16664 . + 0 ID=cds.g6453.t1;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . exon 16781 17455 . + . ID=g6453.t1.exon2;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . CDS 16781 17455 . + 0 ID=cds.g6453.t1;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . exon 17607 18513 . + . ID=g6453.t1.exon3;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . CDS 17607 18215 . + 0 ID=cds.g6453.t1;Parent=g6453.t1 NODE_231_length_30319_cov_40.0998 . three_prime_UTR 18216 18513 . + . ID=g6453.t1.utr3p1;Parent=g6453.t1 #PROT g6453.t1 g6453 MASLALRTISARLASSRIAVRGFATDKRPNIGDPEGKLPDQADIVVVGGGCVGLGVAYSLAKAGKKNIVLLEKEPSLATVTSAQAAGLVGQVRTSVDRVKLAMWSVKTFAELEQLGNYTPGWRQVGSLRVAQTKERADEFRIMLDSCKQAGLEVHVVSAAEAGRRWPHMKFDGATMILWCPTDGYLMPYDLSMSYFYHGSKMGVKYATRAPVTSIQLDNGRVAGVTTPKGSIKCQTVINAAGAHAYHIAKMVGLELPIFPVRHEYFITEPVGRDANGEHLVNPSLPVLRIPDATLYGRPDINSILLGGWEPAGMSVDPASYGVTGAPPPIEPDWPILHDFAQKFDPLYPKINSTGIRTVFAGWPTFTPDGKFIIGPTKKVPGFVMAGGCNAHGVSGSAGIGKHVVESMDNADPEPYVKGLSPERFLSKSWDKATARRQAQHVYETYYCIQPQ* # ORIGINAL: g6454.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 18834 23508 . - . ID=g6454;Name=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 18834 23508 . - . ID=g6454.t1;Parent=g6454;Name=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 23366 23508 . - . ID=g6454.t1.exon1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 23366 23508 . - 0 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 23165 23243 . - . ID=g6454.t1.exon2;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 23165 23243 . - 1 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 22931 23029 . - . ID=g6454.t1.exon3;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 22931 23029 . - 0 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 22669 22816 . - . ID=g6454.t1.exon4;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 22669 22816 . - 0 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 21720 22060 . - . ID=g6454.t1.exon5;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 21720 22060 . - 2 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 21411 21466 . - . ID=g6454.t1.exon6;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 21411 21466 . - 0 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 20241 21228 . - . ID=g6454.t1.exon7;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 20241 21228 . - 1 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 19844 20021 . - . ID=g6454.t1.exon8;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 19844 20021 . - 0 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 19570 19728 . - . ID=g6454.t1.exon9;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 19570 19728 . - 2 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 19227 19323 . - . ID=g6454.t1.exon10;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 19227 19323 . - 2 ID=cds.g6454.t1;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 18834 19032 . - . ID=g6454.t1.exon11;Parent=g6454.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 18834 19032 . - 1 ID=cds.g6454.t1;Parent=g6454.t1 #PROT g6454.t1 g6454 MEEYAGDATTVRTLLIDNYDSYTFNLFQQYAVVNGTPPIVIRNNQLSWDEVRDILPFFDNVVISPGPGRPDVHKDFGVCGNVISHASIPVLGVCLGHQGLSTAFGGKVVVAPEPMHGRVCNVTHGSHAGASSRDGGLFDGIPSTFQVVRYHSLMVAARNLREISLRFRANRPMNPPASLPSHIERLSVIPFAHTGTPRGWPNVPAECSRKTSSNPRAVVDGLCSGSVDAGECGLSVLVRRLSLPVMVDAEDTFVALFSKEHASFWLDSSKVEKGLSRFSFMGACNGPRSTLYEYSMRARAVTCGRLSNDGTWKETVISLDDASQPSSFFDFISREQLQWTGVQTLDERAFPKCDSCSASMASSSSFAVKLPFDFACGFVGYFGYELGAECSPDVTCRSRHLAKEPSDMPDAAFVMCDRAIAFDHEDRTVHLLAACRTSSAAEVREARAWMDATEGTMLRLLDDGRADLKEVAMDALGAPPTQWSRTSAGEVPGRFKLERSRETYIDDVTRCLDQIGRGESYELCLTTHLRAHCRPDPLSLYRRLRRTNPAPHAAFMCLPGERALCGSSPELFLRMDTEGVIESKPIKGTLPRGSTPTEDERRRTELATSSKDFSENLMIVDLIRNDLGRVCEMGSVHTPLLMSVESYATVHQLVSTVRGKLRPGLGAVDAIMSCFPPGSMTGAPKQRSIEILDGLERVSRGVYSGCLGFLSLNGAMDFNVIIRTVVVSPSGVSLGAGGAVVAMSDPVGEFGEMLLKARAPVSSVLASMGIPLSSLEVEGLSQTDMAILRPPSAATPSTVSAAALTANVDAPPSKATSVGCRPTVALIV* # ORIGINAL: g6452.t1 original gene structure, not modified by PASA NODE_231_length_30319_cov_40.0998 AUGUSTUS gene 14618 16076 . - . ID=g6452;Name=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS mRNA 14618 16076 . - . ID=g6452.t1;Parent=g6452;Name=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 15890 16076 . - . ID=g6452.t1.exon1;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 15890 16076 . - 0 ID=cds.g6452.t1;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 15731 15775 . - . ID=g6452.t1.exon2;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 15731 15775 . - 2 ID=cds.g6452.t1;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 15506 15630 . - . ID=g6452.t1.exon3;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 15506 15630 . - 2 ID=cds.g6452.t1;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 15220 15366 . - . ID=g6452.t1.exon4;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 15220 15366 . - 0 ID=cds.g6452.t1;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS exon 14618 14944 . - . ID=g6452.t1.exon5;Parent=g6452.t1 NODE_231_length_30319_cov_40.0998 AUGUSTUS CDS 14618 14944 . - 0 ID=cds.g6452.t1;Parent=g6452.t1 #PROT g6452.t1 g6452 MFKRYNSWGQTATAHSDEDESSSSDEDADLDASMEADDVPEEKMDDAEAAEESGSEGISGEEDDENDDEDESDSMSEGGEDIVKEGGDVSVIDGKLFCKLCPGKVIITMQQMEVHLASKLHKRRAERQTKEEKKKALTPDQIAKRVARNKKKKEKRMLAKKTLKKEKKAAIVASAKAIAEKKESASPITAVIDEAVAVAKPVTPKGPKAKAPKGDKVGKSGASDVPKTVKPTVSDAAAAKDSAKVQPSKEAKVAKNAVPAKIPNAAAAPKAAPKKK* # PASA_UPDATE: g6455.t1, single gene model update, valid-1, status:[pasa:asmbl_4035,status:12], valid-1 NODE_231_length_30319_cov_40.0998 . gene 23800 25914 . + . ID=g6455;Name=g6455.t1 NODE_231_length_30319_cov_40.0998 . mRNA 23800 25914 . + . ID=g6455.t1;Parent=g6455;Name=g6455.t1 NODE_231_length_30319_cov_40.0998 . five_prime_UTR 23800 24327 . + . ID=g6455.t1.utr5p1;Parent=g6455.t1 NODE_231_length_30319_cov_40.0998 . exon 23800 25914 . + . ID=g6455.t1.exon1;Parent=g6455.t1 NODE_231_length_30319_cov_40.0998 . CDS 24328 25914 . + 0 ID=cds.g6455.t1;Parent=g6455.t1 #PROT g6455.t1 g6455 MKELLGEENGLAFDTVTESPCDHHAYSFGMETERHAASSTTRCTKLVVGVIFIVAITAIAAAFSSPLYVEIHGIRKVKLYGEKNGAPVETMTCESNSPQREFILNLHRGRPSGLIIPPHHSFAKISVELSVNKSEGFQRDEAAQAAFYVSANNFNEHGSAWTHMRVKVHESHILAIARRSLDSAGRGPRLQSSAKSTAPTHTKGIVIDIGANSGIYGLLGASHGFESHMFEPHPACASDILYAVSRNRFCGRAFLHPVAVSTHKTTFHMRTDMLCRRSGPLLSPNATRNHILFGGMFLKSVQSVRLDDAIAGIARERGQYAFAAEILRLSHRGASRRGGIVHSGLPRAASPTAAKPFHVAFAKIDVDGHEPAVLLGALGTLRADVVANMVLKATPLRWAQFGFTMGQAAAIISLMCAEGNYYASVVSPFKRFGTREVLEVADDGDFAGGPPTNAAVQMRHALEHGFHDMPPQFNMWFSKQPTDVTVLGGAAGTDEDVAYFANAQSPCGCEGGMCVELRAFLRSEGFLI* # PASA_UPDATE: g9382.t1, single gene model update, valid-1, status:[pasa:asmbl_452,status:3], valid-1 NODE_1119_length_13814_cov_39.5632 . gene 10285 12512 . + . ID=g9382;Name=g9382.t1 NODE_1119_length_13814_cov_39.5632 . mRNA 10285 12512 . + . ID=g9382.t1;Parent=g9382;Name=g9382.t1 NODE_1119_length_13814_cov_39.5632 . five_prime_UTR 10285 10436 . + . ID=g9382.t1.utr5p1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . exon 10285 10465 . + . ID=g9382.t1.exon1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . CDS 10437 10465 . + 0 ID=cds.g9382.t1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . exon 10676 10803 . + . ID=g9382.t1.exon2;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . CDS 10676 10803 . + 1 ID=cds.g9382.t1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . exon 11256 11331 . + . ID=g9382.t1.exon3;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . CDS 11256 11331 . + 2 ID=cds.g9382.t1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . exon 11557 11653 . + . ID=g9382.t1.exon4;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . CDS 11557 11653 . + 1 ID=cds.g9382.t1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . exon 11929 12512 . + . ID=g9382.t1.exon5;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . CDS 11929 12483 . + 0 ID=cds.g9382.t1;Parent=g9382.t1 NODE_1119_length_13814_cov_39.5632 . three_prime_UTR 12484 12512 . + . ID=g9382.t1.utr3p1;Parent=g9382.t1 #PROT g9382.t1 g9382 MDATELLNNGIAEFNADRFKEARELFAAGAALSPDDKALSMWIRKCDAELEQQQTASKPAPSPAPAPVTASVPAPRVKHDWYQTDSAVVITVLAKNVKKEDVDVEYKEQAVSISVKLPAGTEYNMELDLAFPIDTSRCSFNVMSTKVEISLRKKDAVRWPTLERSDACMLNPPVPMASVTADPPKAASVASGGAADVAAPAPKYPTSSKKGVTNWDKIEKDVVKEEKDEKLEGDAALNKLFQQIYADADEETRRAMNKSFQESGGTVLSTNWKEVKKGVEVTPPEGMVPKKWEH* # ORIGINAL: g9380.t1 original gene structure, not modified by PASA NODE_1119_length_13814_cov_39.5632 AUGUSTUS gene 142 933 . + . ID=g9380;Name=g9380.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS mRNA 142 933 . + . ID=g9380.t1;Parent=g9380;Name=g9380.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS exon 142 933 . + . ID=g9380.t1.exon1;Parent=g9380.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS CDS 142 933 . + 0 ID=cds.g9380.t1;Parent=g9380.t1 #PROT g9380.t1 g9380 CLCYIAGASIVAAETLLSGEASIAINWGGGWHHAARDTAAGFCYINDASLAILRLLRGGKRVLYIDIDLHHGDGVEDSFDGCESVACLSLHRASPGFFPGTGTKCKPNAINVPLPRGVEDAMFVAAFSRVFQGVVDAFAPTAIVMQCGADGLASDPHRELNLSNRGLGSCLSMVLRAQVPTLLLGGGGYCHVSAARLWTYMTAIALRRNLDDRVPHHRKISHYGPDFLLHSKAALIARTEGDASLVAKAVSAALQCAGRLRRG* # ORIGINAL: g9383.t1 original gene structure, not modified by PASA NODE_1119_length_13814_cov_39.5632 AUGUSTUS gene 12985 13728 . - . ID=g9383;Name=g9383.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS mRNA 12985 13728 . - . ID=g9383.t1;Parent=g9383;Name=g9383.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS exon 12985 13728 . - . ID=g9383.t1.exon1;Parent=g9383.t1 NODE_1119_length_13814_cov_39.5632 AUGUSTUS CDS 12985 13728 . - 0 ID=cds.g9383.t1;Parent=g9383.t1 #PROT g9383.t1 g9383 VLDVLYYDSVIIVEDDLDISPDFFSYFASTRPLLDSDPSLFCVSAWNDNGKPEFIADKTRLFRSDFFPGLGWMLTRDTWRDWAAKWPPAFWDDWVREPDQRKGRACIRPEVSRVQNFGRVGVSGGQFFDSHIAKIRKNEDAVDFGALDLSYLTKAAYDPELEKEVFQRATEVSVDDVMAGRITCTSCRVTYTDNNDFERIANQLGLMSDRKAGVPRMAYNGVVSIAFRGTRLHIAPRPNWQGYVKDP* # PASA_UPDATE: g9381.t1, single gene model update, valid-1, status:[pasa:asmbl_455,status:12], valid-1 NODE_1119_length_13814_cov_39.5632 . gene 1214 2635 . - . ID=g9381;Name=g9381.t1 NODE_1119_length_13814_cov_39.5632 . mRNA 1214 2635 . - . ID=g9381.t1;Parent=g9381;Name=g9381.t1 NODE_1119_length_13814_cov_39.5632 . exon 1214 2635 . - . ID=g9381.t1.exon1;Parent=g9381.t1 NODE_1119_length_13814_cov_39.5632 . CDS 1214 2635 . - 0 ID=cds.g9381.t1;Parent=g9381.t1 #PROT g9381.t1 g9381 MTPNGVLMEAHLASRRHKAKRSSFEVHAKVADAHHVGMPGPTIATVSGSLGATSAVPASRKRKRAPAKTFKAETTELPPYNVPQELQEDELMRPSDEVSEARRRKCRALLDTLKLEIEQQGTDMSSNIYGKKWKKGNRWTMNAFMLFSIRFRRVMRPHVDPKFRTIGALSSILSELWGVVSEEEKEEYRATATQMREIHFAATRSREELRAVRASEEVDELLEGVGNEDADDSRSGNSDGALQNYAWTEMDTMSGKEESIMDLLDALTPMQFTQPTHSSPAYEDLLLGDTVTPITGQPHDRWASDTRTAFGADATRVFSSSTHQDMRTFESNVCMTSDQVYDQRTIDSGVRRVSAERFRMHSAPTHPADMRVVRVFTDNSSFVSDTTHEQWPQETAGRLLGTTPTHPHMSLGTTPTHPHMSLGTTPTHPHLYLESNHLRVVTPRGNGGGSEYSGAPADESIMNNYWNMAVKLL* # PASA_UPDATE: novel_model_2_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_457,status:3], valid-1 NODE_1119_length_13814_cov_39.5632 . gene 4494 4827 . + . ID=novel_gene_2_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1119_length_13814_cov_39.5632 . mRNA 4494 4827 . + . ID=novel_model_2_5b6be656;Parent=novel_gene_2_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1119_length_13814_cov_39.5632 . five_prime_UTR 4494 4527 . + . ID=novel_model_2_5b6be656.utr5p1;Parent=novel_model_2_5b6be656 NODE_1119_length_13814_cov_39.5632 . exon 4494 4827 . + . ID=novel_model_2_5b6be656.exon1;Parent=novel_model_2_5b6be656 NODE_1119_length_13814_cov_39.5632 . CDS 4528 4809 . + 0 ID=cds.novel_model_2_5b6be656;Parent=novel_model_2_5b6be656 NODE_1119_length_13814_cov_39.5632 . three_prime_UTR 4810 4827 . + . ID=novel_model_2_5b6be656.utr3p1;Parent=novel_model_2_5b6be656 #PROT novel_model_2_5b6be656 novel_gene_2_5b6be656 MCMYMCMCMCMCIGVYMYEYVCVCLSVYVYVMYVRMCQMCMSVSVYMSVCIGMCMCMCMCTCMWMCMCMYVCVCVCVCQCVYVYVSRMCIAVY* # PASA_UPDATE: g9603.t1, single gene model update, valid-1, status:[pasa:asmbl_984,status:12], valid-1 NODE_1259_length_12624_cov_50.9336 . gene 1817 2990 . - . ID=g9603;Name=g9603.t1 NODE_1259_length_12624_cov_50.9336 . mRNA 1817 2990 . - . ID=g9603.t1;Parent=g9603;Name=g9603.t1 NODE_1259_length_12624_cov_50.9336 . five_prime_UTR 2968 2990 . - . ID=g9603.t1.utr5p1;Parent=g9603.t1 NODE_1259_length_12624_cov_50.9336 . exon 1817 2990 . - . ID=g9603.t1.exon1;Parent=g9603.t1 NODE_1259_length_12624_cov_50.9336 . CDS 2095 2967 . - 0 ID=cds.g9603.t1;Parent=g9603.t1 NODE_1259_length_12624_cov_50.9336 . three_prime_UTR 1817 2094 . - . ID=g9603.t1.utr3p1;Parent=g9603.t1 #PROT g9603.t1 g9603 MVTLHNTEANQKAKMLPPLQKTGSGSPLSKNAELEVTTVHVATNGTASPPRPTSKSPVGDAATLMPKLVGPQSTSAAIRQTKSWTNLPPADAQTQPPSASSGIRLAVSRSFTGSADVQVKASEQAKGCADGRASLQPSASFTAVKPVPPTTPSGTNAAKARRWTLGADSMCPPILSLPSDSLAPATPTALLSSTPSTGSLSPASTSPRNSLLSSESVKSLTKSPSTRRKSCTGELLYKCDKIRDSEKGMFGLMGEIETIVEKMGSKLEQAGEMAEFEAKLAKMSGVRREG* # PASA_UPDATE: g9605.t1, single gene model update, valid-1, status:[pasa:asmbl_985,status:13],[pasa:asmbl_986,status:12], valid-1 NODE_1259_length_12624_cov_50.9336 . gene 6521 12276 . - . ID=g9605;Name=g9605.t1 NODE_1259_length_12624_cov_50.9336 . mRNA 6521 12276 . - . ID=g9605.t1;Parent=g9605;Name=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 11995 12276 . - . ID=g9605.t1.exon1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 11995 12276 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 11652 11828 . - . ID=g9605.t1.exon2;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 11652 11828 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 10585 11478 . - . ID=g9605.t1.exon3;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 10585 11478 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 10192 10277 . - . ID=g9605.t1.exon4;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 10192 10277 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 9410 10073 . - . ID=g9605.t1.exon5;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 9410 10073 . - 1 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 8237 9256 . - . ID=g9605.t1.exon6;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 8237 9256 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . exon 6521 7859 . - . ID=g9605.t1.exon7;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . CDS 6966 7859 . - 0 ID=cds.g9605.t1;Parent=g9605.t1 NODE_1259_length_12624_cov_50.9336 . three_prime_UTR 6521 6965 . - . ID=g9605.t1.utr3p1;Parent=g9605.t1 #PROT g9605.t1 g9605 MRYLATVGGVEAHDGSREGSAVEKQIMASNPIMEALGNAKTTRNDNSSRFGKYIQIHFNAQNKIRGASIRTYLLEKSRVVHHAEQERNYHIFYQLLAGASDTLRAELELLPVKQFVYTSHGASTVPNVDDRVDFEEMRRALGIVGVDEAGQHEVFRIIASILHLGNIKISASKGDSSSIDGTADAHIAAASRFLGIDEALVRKWMTHKQITVGKETVVSPVNAQIACDNRDALAKAIYARLFDWVVARVNDSLSGGGQSGAFIGILDIYGFESFQRNSFEQFCINYANENLQQQFTRHVFKLEQEEYVREQIVWSFIGFEDNQPCLDLIESKMGILALLDDECRMPKASDTSFAEKLIQNHGKHEFFSKPKLGTNLFVVRHYASSVTYNTEGFLDKNRDRVAEELLSLVRASKSDVVRVLFPPEEDATASSSGAAAGKKSTKATTVGSLFKLRACGVLETIKISSAGYPSKLLYPEFYERYRILARNIKGPPKSVDHRSVTSTILKATLPEDRFQLGKTKAFLRAGQLAILEKRREDRLTECVMRIQTAYRGHYYRKMFLAKRRAAIKIQAGIRGFIARRRYQRMRRTRAATRIQARFRGHLARETFLLQKWAVVVLQSAYRGLVARRQYLAARREKAASVLQRNVRMWICRRKYRRSICRIVLVQGLVRRRAARKLLRQLREEARSMNKLKEVQYALENKVIELQQRLDERTATAKSLTEKCGHLQSEVTKTTEANAALKKQLEEEASARVATERALNDTLGQVSAMEAALERARGSHAHAHSTNPVIVESGVATPTESVAAVPMPDRKLSVYERRMSVSRRLPPSAAELGLSVLSEEALHHVPSRRSSLVPTGVAGRKVSIALAPSAALLAVAALGGGGGGVSADLDRERATLAKENKLLKEELADAAWENKTLQDEIERLKAAIAQGATTATAGVTTGVTAGGAATGSASDAAVSASNSPADAPAEPSKIIMLKYSPKDGIRLVDVAIHLMRPSLVDGRPIPAQILLHAIRYDFYLNRHEQLDYLLGNADQALHQAYEDSVGNVDGLSFWLSNLLILMWALARDSAPVKSATLEFQRRLDLLVIDVYRALIETMRESLLPIIMGLLEDEQAPGVPASKSVASFFGLFRRDGLKTLPVLDFLGEQLRIMRHNYLEPSIITQIFAQIFTFIDGQLLNRLLLRRDLCTWNRGVHINFNLNQVKAFAAAHGLSGDATWESMSHIVQASELLQMKKSTAADVDAIIGKCNKLNSLQFHKILTNYHHDDFEERVPPDVINSVAQRVAEVEASKRRLRRRTSLVVENSSVVVPPSVNPPNFFMQSLALPRNLPLEFVEEIEL* # ORIGINAL: g9604.t1 original gene structure, not modified by PASA NODE_1259_length_12624_cov_50.9336 AUGUSTUS gene 4222 6024 . + . ID=g9604;Name=g9604.t1 NODE_1259_length_12624_cov_50.9336 AUGUSTUS mRNA 4222 6024 . + . ID=g9604.t1;Parent=g9604;Name=g9604.t1 NODE_1259_length_12624_cov_50.9336 AUGUSTUS exon 4222 6024 . + . ID=g9604.t1.exon1;Parent=g9604.t1 NODE_1259_length_12624_cov_50.9336 AUGUSTUS CDS 4222 6024 . + 0 ID=cds.g9604.t1;Parent=g9604.t1 #PROT g9604.t1 g9604 MHRTYEPITKCSNKLLGYKWEQENFEQHRKKVSAARPVIDTNSPSTYMHLQLKMKKLQMEEERLSIIERDNRILLEKMADIMRQKGEINRLNKYTHKSLNKTKRQRELMRITQENQAILHRLQSIEPLYNHNQWQEEWGVNVGYLRNIAKFPPPHDEGASSPPQSPPREAKSHKGNDSDDELASPPPKKQGTDRKTEQATKPKAPAPSTTAASKKTGEPPKRPAEQSSSATSATREATKKAPAAPAVKKETPAAAKKETAAAPAKTAPPAKKETAPPAKKEAAPPAKKEAAPPAKKEEAKKETPAASSKESLKKEKSSASIKSNASSSSVKKGAATETKEAVQKEEPPVHHEPAEEAKVEPAEAAHAEEHKDEAPAEAAQETAHEEPEPVHEAPAQEEQAPVEEQAPAQEEEQAPAAEEQAPAQEEQTPVAEEQAPAQEEEQAPAEEQAPAAEEQAAAEEQAPAQEEQQAPAVEEQAPAAEEQAPAAEEQAPAAEEQAPAQEEEQAPAEEQAPAVEEQAPAAEEQAEEQAPAAEEQAEEQAPAAEEQAPAEEQAPAAEAPAQDEEQTPAAEEEQQAAVDDAQEAQQEAQAPADDEQQASE* # ORIGINAL: g554.t1 original gene structure, not modified by PASA NODE_3122_length_4252_cov_38.289 AUGUSTUS gene 63 841 . - . ID=g554;Name=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS mRNA 63 841 . - . ID=g554.t1;Parent=g554;Name=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS exon 806 841 . - . ID=g554.t1.exon1;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS CDS 806 841 . - 0 ID=cds.g554.t1;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS exon 536 596 . - . ID=g554.t1.exon2;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS CDS 536 596 . - 0 ID=cds.g554.t1;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS exon 349 419 . - . ID=g554.t1.exon3;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS CDS 349 419 . - 2 ID=cds.g554.t1;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS exon 63 189 . - . ID=g554.t1.exon4;Parent=g554.t1 NODE_3122_length_4252_cov_38.289 AUGUSTUS CDS 63 189 . - 0 ID=cds.g554.t1;Parent=g554.t1 #PROT g554.t1 g554 MRELVPLDVAEMESVTITSLRAEVERLSQLYQDLQFQLFMHTGKSQCDIPSDKQRNNVDVACSPMDVSGGSQRGEGVDHSSVALDASAGIAVCTQHSN # ORIGINAL: g2794.t1 original gene structure, not modified by PASA NODE_4912_length_1145_cov_42.3178_potentialcontaminant AUGUSTUS gene 1 1145 . - . ID=g2794;Name=g2794.t1 NODE_4912_length_1145_cov_42.3178_potentialcontaminant AUGUSTUS mRNA 1 1145 . - . ID=g2794.t1;Parent=g2794;Name=g2794.t1 NODE_4912_length_1145_cov_42.3178_potentialcontaminant AUGUSTUS exon 1 1145 . - . ID=g2794.t1.exon1;Parent=g2794.t1 NODE_4912_length_1145_cov_42.3178_potentialcontaminant AUGUSTUS CDS 1 1145 . - 2 ID=cds.g2794.t1;Parent=g2794.t1 #PROT g2794.t1 g2794 GGVGAGSTCETNVGARRVEVRSLDAALGSPPSSASEHVGLLTFSSGAIDYRALPVATSDSINVVVAVVASIASVLGVMIVVMLLVFCFCLGRSHAHAPKDSTVKFSLVFTDIQSSTRLWVEDPEEMGGALDIHHRLIRELIRKHKGYEVKTIGDSFMVAFKNADDAVRMSYELQHVFHRCEKFSPSIDRAYLSFDKQMLLLSNESERLTCNLPPDVYPLMWSGVRVRIGIHTAFGEIKRDEVTQAYDYYGLVTNTAARVEAVSHGGQVCLTEGTLQELREVHLDTFEGALPTKVLNAQSSGPSTALWLGSVELRGLADQVTIYQLECVTGRQFPPLRLDREVSEDFGVDDIEDLSRSAEEDSSRNSMGEAPKNNNGMPPKA # ORIGINAL: g12976.t1 original gene structure, not modified by PASA NODE_1788_length_9250_cov_40.8585 AUGUSTUS gene 2546 5874 . + . ID=g12976;Name=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS mRNA 2546 5874 . + . ID=g12976.t1;Parent=g12976;Name=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 2546 3250 . + . ID=g12976.t1.exon1;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 2546 3250 . + 0 ID=cds.g12976.t1;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 3420 4045 . + . ID=g12976.t1.exon2;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 3420 4045 . + 0 ID=cds.g12976.t1;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 4242 4568 . + . ID=g12976.t1.exon3;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 4242 4568 . + 1 ID=cds.g12976.t1;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 4825 4965 . + . ID=g12976.t1.exon4;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 4825 4965 . + 1 ID=cds.g12976.t1;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 5217 5874 . + . ID=g12976.t1.exon5;Parent=g12976.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 5217 5874 . + 1 ID=cds.g12976.t1;Parent=g12976.t1 #PROT g12976.t1 g12976 METARTASNFTTPEGIEKALKIRSAFAALSSADNLPEIIARFSDLKLACGVSGKELLTPTDLYSCIKEATACVAVADDNLPSAPDQCGMDGGSMRDQCNRPVTANDAPTVTTVPSEGHVSVCAQGLFPGRRLSGVSAGAMHARCTELWGLLEQRRMGDAYWQQTAEHPVESLPAAVGVRVGIVGAGITGLRFAIEACLMGAECVDVYESRSEFSRRNELHLWPFAVRDLASVGVKVFYRSLCAGNIEHAPIHRLQSALAKIALLLGANIRHGKFVSLGQCFQESVDDDGGPMCQLCVHLKDSGGTDEASVGAYEAAEKYHVVLGADGERSGFAESTGFERRTFRAGAAIGITANFVNGGSPADNVPQEFAKISYADRAFFNRVEEVSGLKLENLVYYRGEAHYLVMTPTADSLVVTGVLRRAELEGGTDALVAPDNVDEYELEKVVRAVADVVGIPRDAPLIRDSRHIKTADRSGQSPASEEKDVADVKVFDFSRRRVATRAIRVTATPLSGPVTCVRSEGRMCGLPPCSSVVMLAGDALEAPFWPQGTGANRRKGVTKRTPTPAIAYLVIFRGILSALDSAWTLRCLRWRKVDDVVQEREAAFRAMESCSPSTLLDHVAGYTADPRSRYRPTDLAAGMSQSSHLSPPADVCGVGAAQERNADTAITTTRAPSQSYGLYRNANLQTLSPDSDRTGITTTTQPEALSDSNAIAHESTESVGNVVAPYSGVRFMDVLNAGYPSTDVAMDALRPTDGTATVGTVQRLAYKFERMADNPHGDPNAPNALPLPLPGQEDVVMGDGEGIAKRDAWLYSLRAMEE* # PASA_UPDATE: g12977.t1, single gene model update, valid-1, status:[pasa:asmbl_2618,status:12], valid-1 NODE_1788_length_9250_cov_40.8585 . gene 6354 9179 . - . ID=g12977;Name=g12977.t1 NODE_1788_length_9250_cov_40.8585 . mRNA 6354 9179 . - . ID=g12977.t1;Parent=g12977;Name=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 9060 9179 . - . ID=g12977.t1.exon1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 9060 9179 . - 0 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 8651 8767 . - . ID=g12977.t1.exon2;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 8651 8767 . - 0 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 8070 8179 . - . ID=g12977.t1.exon3;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 8070 8179 . - 0 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 7688 7773 . - . ID=g12977.t1.exon4;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 7688 7773 . - 1 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 7092 7265 . - . ID=g12977.t1.exon5;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 7092 7265 . - 2 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 6817 6869 . - . ID=g12977.t1.exon6;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 6817 6869 . - 2 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . exon 6354 6611 . - . ID=g12977.t1.exon7;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . CDS 6480 6611 . - 0 ID=cds.g12977.t1;Parent=g12977.t1 NODE_1788_length_9250_cov_40.8585 . three_prime_UTR 6354 6479 . - . ID=g12977.t1.utr3p1;Parent=g12977.t1 #PROT g12977.t1 g12977 MFSYAAREHTRLYGTTPTHYAKIAQKNRRHGVNNPNACFQSEVPLDVIMDKRRLLSDPITFFQSAPTADGGAAAVLCSESYVRKHKLESKAVEIVAQEMVTDLPSSFEGDFRAVGGYQMAKTAAEKVYRASGLTSKDVDVLEVHDCFSCNELFMYEALQLCPEGNGGRLVDSMEWIGNPSGGSVCRVGGRWVVNPSGGLESKGHPIGATGLGQCAELVWQLRGSAGKRQVPGAKVALQHNFGIGGAAVVTMYKRPQFAPSAKL* # ORIGINAL: g12975.t1 original gene structure, not modified by PASA NODE_1788_length_9250_cov_40.8585 AUGUSTUS gene 134 1402 . - . ID=g12975;Name=g12975.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS mRNA 134 1402 . - . ID=g12975.t1;Parent=g12975;Name=g12975.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 1089 1402 . - . ID=g12975.t1.exon1;Parent=g12975.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 1089 1402 . - 0 ID=cds.g12975.t1;Parent=g12975.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS exon 134 855 . - . ID=g12975.t1.exon2;Parent=g12975.t1 NODE_1788_length_9250_cov_40.8585 AUGUSTUS CDS 134 855 . - 1 ID=cds.g12975.t1;Parent=g12975.t1 #PROT g12975.t1 g12975 MSVVLQIVREHPGLLLSALREVASKKSKEVRVNAGPPIIIAVLDALSLFTDDWEKHLQAFQCKLRPGDLSRIYLLDSRGIKTHALLDCLSEPTMFVLLNWLDTGETGSVTSVVTERSEKSHHSERDAWTGRSDAGYDKSSSSRADTRYRRESPDTRESRAIDRRSVGDNRDKYERDYGSSDVRKSEGRRYSDQLESEHRGGRDYYDRQSRDGERVGKRARDVDDECERSTMPQKERHVKALPVPVTLAFSYLARAKATLAAKAEYGSVTKTDAELDHRSVTIPVNYVTDIGVTPVDMGEETQLHPALKRMKVDECAVGVDGGGGTAARDSADTLTALLASAKSVA # ORIGINAL: g10860.t1 original gene structure, not modified by PASA NODE_730_length_18421_cov_42.8051 AUGUSTUS gene 2720 4207 . - . ID=g10860;Name=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS mRNA 2720 4207 . - . ID=g10860.t1;Parent=g10860;Name=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 4036 4207 . - . ID=g10860.t1.exon1;Parent=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 4036 4207 . - 0 ID=cds.g10860.t1;Parent=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 3825 3885 . - . ID=g10860.t1.exon2;Parent=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 3825 3885 . - 2 ID=cds.g10860.t1;Parent=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 2720 3542 . - . ID=g10860.t1.exon3;Parent=g10860.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 2720 3542 . - 1 ID=cds.g10860.t1;Parent=g10860.t1 #PROT g10860.t1 g10860 MADDASARIGTAPNPFAGMRITPPTALMAMDATKERPVCARCKGTRKYYCYDCYDVMCDRGDIPTVKLPIPVDIIKHRGEKASKSTAVHARILAPDAVRLSVYPDMWDYEDKSRVVLLFPSPDAAELRHLDPPEVTCPSFDRLLVIDSTWNQTGRILADRRLKGIRHVKLSSVQGHFWRVQNGKPDTHLATIEAIHAFFVEYERRYSSPPVPAASPSIPAANADALRADLSVASPAPAHGESVGDGYDGRYDNLLYYFAHQYNRVQTAYVTDERRRTDKNLKLNRINYIDYERPAKRARTDDAPAQGDARGACAGSRDAPGRGDAVNVRRDVCVGQEEGGVVSGARDADSK* # PASA_UPDATE: g10859.t1, single gene model update, valid-1, status:[pasa:asmbl_9094,status:3], valid-1 NODE_730_length_18421_cov_42.8051 . gene 1112 2676 . + . ID=g10859;Name=g10859.t1 NODE_730_length_18421_cov_42.8051 . mRNA 1112 2676 . + . ID=g10859.t1;Parent=g10859;Name=g10859.t1 NODE_730_length_18421_cov_42.8051 . five_prime_UTR 1112 1226 . + . ID=g10859.t1.utr5p1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . exon 1112 1283 . + . ID=g10859.t1.exon1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . CDS 1227 1283 . + 0 ID=cds.g10859.t1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . exon 1453 1693 . + . ID=g10859.t1.exon2;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . CDS 1453 1693 . + 0 ID=cds.g10859.t1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . exon 1892 1971 . + . ID=g10859.t1.exon3;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . CDS 1892 1971 . + 2 ID=cds.g10859.t1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . exon 2198 2249 . + . ID=g10859.t1.exon4;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . CDS 2198 2249 . + 0 ID=cds.g10859.t1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . exon 2508 2676 . + . ID=g10859.t1.exon5;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . CDS 2508 2536 . + 2 ID=cds.g10859.t1;Parent=g10859.t1 NODE_730_length_18421_cov_42.8051 . three_prime_UTR 2537 2676 . + . ID=g10859.t1.utr3p1;Parent=g10859.t1 #PROT g10859.t1 g10859 MPPKFTRGPPRSDVQLAERANLLGNDYDSDEDEDEDVIYGESRGASRGGPSRPPVRAPVHDPKVARVKAEVTEVVGIMKQNIGKVLDRGEKLENLEEKSENLQEGAAKFRRGANTLKKRMWWANMKLRLIVFAIIAAVITIVALIIYFKTKK* # ORIGINAL: g10858.t1 original gene structure, not modified by PASA NODE_730_length_18421_cov_42.8051 AUGUSTUS gene 136 669 . - . ID=g10858;Name=g10858.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS mRNA 136 669 . - . ID=g10858.t1;Parent=g10858;Name=g10858.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 136 669 . - . ID=g10858.t1.exon1;Parent=g10858.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 136 669 . - 0 ID=cds.g10858.t1;Parent=g10858.t1 #PROT g10858.t1 g10858 MSLPNGNGALSLSAEGDVAVPAGLGSPIGTIAAASIVSAAIQLDKELMCPVCHDVIKEAFMARCGHSFCYMCITRYLESVRQECPLCRKALDREGIYPNFTLNTLLERHAVMQRQIQSPPIRQLQGAIQTESTWNVTDINTLLGALLDKKRRLVADERDGELDVLIDFFQRARGLKEE # ORIGINAL: g10861.t1 original gene structure, not modified by PASA NODE_730_length_18421_cov_42.8051 AUGUSTUS gene 5333 13823 . - . ID=g10861;Name=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS mRNA 5333 13823 . - . ID=g10861.t1;Parent=g10861;Name=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 13339 13823 . - . ID=g10861.t1.exon1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 13339 13823 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 12400 12940 . - . ID=g10861.t1.exon2;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 12400 12940 . - 1 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 11819 12103 . - . ID=g10861.t1.exon3;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 11819 12103 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 11008 11545 . - . ID=g10861.t1.exon4;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 11008 11545 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 10662 10768 . - . ID=g10861.t1.exon5;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 10662 10768 . - 2 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 10300 10434 . - . ID=g10861.t1.exon6;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 10300 10434 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 9428 10105 . - . ID=g10861.t1.exon7;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 9428 10105 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 9142 9286 . - . ID=g10861.t1.exon8;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 9142 9286 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 7857 8929 . - . ID=g10861.t1.exon9;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 7857 8929 . - 2 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 7422 7733 . - . ID=g10861.t1.exon10;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 7422 7733 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 6721 7328 . - . ID=g10861.t1.exon11;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 6721 7328 . - 0 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 6367 6491 . - . ID=g10861.t1.exon12;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 6367 6491 . - 1 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 6048 6149 . - . ID=g10861.t1.exon13;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 6048 6149 . - 2 ID=cds.g10861.t1;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS exon 5333 5673 . - . ID=g10861.t1.exon14;Parent=g10861.t1 NODE_730_length_18421_cov_42.8051 AUGUSTUS CDS 5333 5673 . - 2 ID=cds.g10861.t1;Parent=g10861.t1 #PROT g10861.t1 g10861 MLIAAADGMMPRAPMAAHHRSLLGISTSSQRVLHRKWDSTSRPQSACNSSSLFIVAEVALFVCAIILAPAHSMASHTKSQPPTFVIVSIETSSDDVIALTLEGASGNMAAPNQSASQWLVNGVCPTAVGRFSRPWHQDAVDSSLLTMRHSFYFVLENKLMEGRVYEIIGPDNITATLAFSEATTHCESIHASQVGYFQSLKAKFANFGVFLGDLGAQQLLRPPSYSVIDAKSITVLGPLNASYLGYDAAHVPSGEHVYRMDLSDIPSGGPYRLVVHGHGCSHPFGVGTNYTDALWYTITRGLYHKRCGIAVEARHSHWSRCACHTSVLVTDAQPGQFVTEDSCLGGCSTYPSRPIKGGYHDAGDFDRGPGHTLFGVSLLETFEFFKDDISDFVLDIPESDNEIPDYLDEAMWAILLWEQLQESDGGVRAGTEAESHPVGGDNAGSDRLVYRTFRRHWHSTASAVGMFAHASRLVREYNETRADELMVRALKAWTWLSTHTAERTAATHMYAALQMYLSTGEDAYHVVFEACVTEFYNLIPQWPQTYWASEMNAFDGAIFSPYFFPYLTTNLSTKPWIREYLVTWIDREAAKVMDSLNSAYVTGPIVNVGWGSATNPGVFANSLLLKYFLTGDETYVEAIHSMAHYAIGVNPLGRSYVTGLGAAPPNDVLDLDSFSQIIAGKGGVPGIVIFGPVATPEDYDYEKMVWSAVYPKWHSLPDQRRFADAHTLVTANEFNTVATMHSSVFYVTLAALDRRRTRTALNASETKMQTYSWQDHVPTLTHPLVPVLGIDVCLPPVRQSTSGSVLFSGLPGEMWDPQCSEYLTVVEAVDAHALGEPVAQLLRLEPDRYHAPYLKVYCGQRDREDMSAFATLNIRIRLVDPVGAPIMKYAISFSGGFEGDSNRVNIAEFLHDDAGNLLPPDQQGITGNWTWARIPLSRARTEANDICTVDAIIFDILESAQMMYVSDVDFSGDGTPPATFVEMVTASDASLVLIYDGHGQGVISQDASDYLINGQPPDAVGRYTIARGQSFEHCDRVTVRHHIYLTLPGGAHFEEGKQYIVNSFTRHGPAVAPLTFNAATTRCECIKANQVGYSSVTNQRRFAVLGIWNGQLGTRAFDRIPSFVVMRIADGTVVYEGIAEDPVDDTKAVLGSGEIAYRLNLNRVPDGGPYKIVVPGVGSSHAFGVGVDYSRHIAYTELRGLYHQRCGVPLLQQNTEYHRGTCHNVVNITDAETGGFITDTSPVTRHVMGSWHDAGDFDRSHVHQFVIESLLVLYEAYAHLHLDAVNDIPESGNGIPDMLDEALFGVLFWEYMQDSDGGVRAGTETSHHPGGVTADTDELAYRTFKKTWLASIVSCGLFAHTSRLVAAYDPSRAGKLLARAHAAWQWAEAVNPGDKRAGPRMYACLQLWISTGDDGFHECFKLEARRVQFDGVGGYLPEYWTSATMGDGQVFSEYFFDYILLNTTGVTKYNTSAAPGARDRRDFPVDAEVAGWLRGWLSKHSGYFGDTARARFYPIGAMDGVAYGSATGQGVTAEVLLLEHRLSGDASILALVESLADYTLGLNPLGKSYVTGLGMDRPVSPLHLDSFPFMALGKGPIPGLTLYGPFGSPPTVDYQARVWRKAYPNWFTLPEQRRFAEGWAFVNANEFTITVPMCQNIAMYATLYALNREKAKSPIKPQRTFVYNPKNGAAYACTEFECSVTRAGWSPRKWQVLPGISSIAGVRVRDGTLFGRDNTSVPHMSDDGGAMWHAITEDEELIAFEDGFKSSRGVDISPSAALTPGLNGLPEGSIDGPFHVTSEGIFVFDLNKPKLVVKWSCAEYTCRK* # ORIGINAL: g14158.t1 original gene structure, not modified by PASA NODE_1980_length_8211_cov_39.7075 AUGUSTUS gene 2010 3149 . - . ID=g14158;Name=g14158.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS mRNA 2010 3149 . - . ID=g14158.t1;Parent=g14158;Name=g14158.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 2010 3149 . - . ID=g14158.t1.exon1;Parent=g14158.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 2010 3149 . - 0 ID=cds.g14158.t1;Parent=g14158.t1 #PROT g14158.t1 g14158 MSAHGEGVAAAANKSSIKSNNSLTHVCVVCGTVAGQRCGNCQIARYCSRTCQKTHWSAGHRDACVPATPQTPSASKSSDGGRGVHAGAPALHPHIIQGLPAPVNPPSTKAGGTHVAKTALPPLSANGRNAIALCIDGEDMDSMFLNIIQNLLRADGINAQPVEVAPKRSLVAKIASLVVNPNLRMIIFIGDSRDDFSNFGCAEVKALIVPWVGAGGALLMQGERPVTGLLREWFRKPWTMEGDYYRRTDFRINRACDVIASDAEGIFRELAANAPASLNQKTCMLSHVAPGECLYTPAPGATTQSSVFAPVDIDSNMCPFAVAAYGNGHIAFVGDVNYEPTTVHVVRLLVRAWASRTGVASIAVPVAGAGAESRGRTGR* # ORIGINAL: g14159.t1 original gene structure, not modified by PASA NODE_1980_length_8211_cov_39.7075 AUGUSTUS gene 5249 7159 . + . ID=g14159;Name=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS mRNA 5249 7159 . + . ID=g14159.t1;Parent=g14159;Name=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 5249 5778 . + . ID=g14159.t1.exon1;Parent=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 5249 5778 . + 0 ID=cds.g14159.t1;Parent=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 5949 6158 . + . ID=g14159.t1.exon2;Parent=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 5949 6158 . + 1 ID=cds.g14159.t1;Parent=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 7003 7159 . + . ID=g14159.t1.exon3;Parent=g14159.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 7003 7159 . + 1 ID=cds.g14159.t1;Parent=g14159.t1 #PROT g14159.t1 g14159 MPGERRFVYEVVSGQQDPATMLRSVNLSEMTPPAREASSFLNAYGAFGMTSVAPRGFPRRRYNWRNRMASFAASTQQQCVAGTEDALCFEAGNWSRPLFEVAHLILATPDNVKAGLLLPEDDRYGPFPANTASPSINAQRAREHPLVMPGVMSIASADIGIVWPREAFWGLVLTHRYTDATGSGAEAIADILLQWKGDPHAAFRERLQALWRHLKADLERLRRPEFSLQASDEAVYNAWFADLDSARDYPRNWGSGRNSVAVVMRSIESGFDSVHPVKYSQPSMREAMLSYYLRSHIL* # ORIGINAL: g14157.t1 original gene structure, not modified by PASA NODE_1980_length_8211_cov_39.7075 AUGUSTUS gene 2 1014 . + . ID=g14157;Name=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS mRNA 2 1014 . + . ID=g14157.t1;Parent=g14157;Name=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 2 77 . + . ID=g14157.t1.exon1;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 2 77 . + 1 ID=cds.g14157.t1;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 201 366 . + . ID=g14157.t1.exon2;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 201 366 . + 0 ID=cds.g14157.t1;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 645 777 . + . ID=g14157.t1.exon3;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 645 777 . + 2 ID=cds.g14157.t1;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS exon 924 1014 . + . ID=g14157.t1.exon4;Parent=g14157.t1 NODE_1980_length_8211_cov_39.7075 AUGUSTUS CDS 924 1014 . + 1 ID=cds.g14157.t1;Parent=g14157.t1 #PROT g14157.t1 g14157 ITEDGRTALMKLARGDMRRVLNILQSTVMAFGAVTEANVYACTGQPLPSDIAWMVELMLNSVQKHEDGRETKLTTRDVFGKLMEVKTLKGLALFDILTEVHAYIHRVNFPPSVRIFLLKEIADIEYRLASGTSEKLQLGSLVGVFQIARSMVVA* # PASA_UPDATE: g4856.t1, single gene model update, valid-1, status:[pasa:asmbl_6051,status:12], valid-1 NODE_3426_length_3497_cov_90.8545 . gene 2088 3140 . + . ID=g4856;Name=g4856.t1 NODE_3426_length_3497_cov_90.8545 . mRNA 2088 3140 . + . ID=g4856.t1;Parent=g4856;Name=g4856.t1 NODE_3426_length_3497_cov_90.8545 . five_prime_UTR 2088 2176 . + . ID=g4856.t1.utr5p1;Parent=g4856.t1 NODE_3426_length_3497_cov_90.8545 . exon 2088 2854 . + . ID=g4856.t1.exon1;Parent=g4856.t1 NODE_3426_length_3497_cov_90.8545 . CDS 2177 2854 . + 0 ID=cds.g4856.t1;Parent=g4856.t1 NODE_3426_length_3497_cov_90.8545 . exon 3135 3140 . + . ID=g4856.t1.exon2;Parent=g4856.t1 NODE_3426_length_3497_cov_90.8545 . CDS 3135 3140 . + 0 ID=cds.g4856.t1;Parent=g4856.t1 #PROT g4856.t1 g4856 MLPLHYRPGQGPDVQGLPSSSAGASFGGPVTSPAAAPSGGAGTFGYNPNFLHTVADSRYKRSRFEGFGKSARLIFRQLLRKLEGDTFGMSNADITRRKYRARFVIGLATVLLVGGFFFMRSTPFTAAINADGNVVYREAPTGADDGPGVGRLDNTDPPGAPPGDKAENAQGRGDVPPVEKELVRLRSPGRYQFKPIRPSQDRRRAVRDAFLHAWRGYRQYAWGHDES* # PASA_UPDATE: g4855.t1, single gene model update, valid-1, status:[pasa:asmbl_6050,status:12], valid-1 NODE_3426_length_3497_cov_90.8545 . gene 151 1640 . - . ID=g4855;Name=g4855.t1 NODE_3426_length_3497_cov_90.8545 . mRNA 151 1640 . - . ID=g4855.t1;Parent=g4855;Name=g4855.t1 NODE_3426_length_3497_cov_90.8545 . five_prime_UTR 1579 1640 . - . ID=g4855.t1.utr5p1;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . exon 1484 1640 . - . ID=g4855.t1.exon1;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . CDS 1484 1578 . - 0 ID=cds.g4855.t1;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . exon 986 1118 . - . ID=g4855.t1.exon2;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . CDS 986 1118 . - 1 ID=cds.g4855.t1;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . exon 638 681 . - . ID=g4855.t1.exon3;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . CDS 638 681 . - 0 ID=cds.g4855.t1;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . exon 151 274 . - . ID=g4855.t1.exon4;Parent=g4855.t1 NODE_3426_length_3497_cov_90.8545 . CDS 151 274 . - 1 ID=cds.g4855.t1;Parent=g4855.t1;3_prime_partial=true #PROT g4855.t1 g4855 MARRTLFVAGISSRSRPRDVAYEFERYGRLVRCDMPAGVNGNRGYAFVEFEDERDAADAYDAMQGRSIDGTRVQVQWQKHPPSRTWRGDDGPAPPRPRSPPRRRSRSPPRRRSPSPVRRPRSPPRRRSPSPR # PASA_UPDATE: g14286.t1, single gene model update, valid-1, status:[pasa:asmbl_6943,status:12], valid-1 NODE_4096_length_2190_cov_29.4005 . gene 48 2165 . + . ID=g14286;Name=g14286.t1 NODE_4096_length_2190_cov_29.4005 . mRNA 48 2165 . + . ID=g14286.t1;Parent=g14286;Name=g14286.t1 NODE_4096_length_2190_cov_29.4005 . five_prime_UTR 48 49 . + . ID=g14286.t1.utr5p1;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . exon 48 283 . + . ID=g14286.t1.exon1;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . CDS 50 283 . + 0 ID=cds.g14286.t1;Parent=g14286.t1;5_prime_partial=true NODE_4096_length_2190_cov_29.4005 . exon 657 677 . + . ID=g14286.t1.exon2;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . CDS 657 677 . + 0 ID=cds.g14286.t1;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . exon 863 975 . + . ID=g14286.t1.exon3;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . CDS 863 975 . + 0 ID=cds.g14286.t1;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . exon 1172 1243 . + . ID=g14286.t1.exon4;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . CDS 1172 1243 . + 1 ID=cds.g14286.t1;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . exon 1580 2165 . + . ID=g14286.t1.exon5;Parent=g14286.t1 NODE_4096_length_2190_cov_29.4005 . CDS 1580 2165 . + 1 ID=cds.g14286.t1;Parent=g14286.t1 #PROT g14286.t1 g14286 PSSGHQSPPRLLKTMTRPIAAVYRALQSLAGAESSGRIQRATVAVELTVWHPSPFFRSLFCLFSPAHVAFVVCTCMLTGNHAQDKLFYTVAIHALLSLMLFRIVQMFEDLIRDKQLIAGEAYKELNRFTDAMSPAHGHFVAGYAKRRVGSPYAQHHPHSDIHVPANELPRSPLGRRSVTPSGTASPRMGSVAMHPTAHTLALSSAPAQRHHPSSSPIGAFNAQNSPSSARMASTANGSVFGHGYASAHVTGVDHDVTEQSRNGSHTTTPNLNSNGLNLNSRAESQSQSQHLHAGSQLGHLSTTGHESDGSTGGGCARSMLVCAAVVLLDLVWYIYVWCVSE* # PASA_UPDATE: g7604.t1, single gene model update, valid-1, status:[pasa:asmbl_9331,status:12], valid-1 NODE_779_length_17789_cov_38.7706 . gene 141 4064 . + . ID=g7604;Name=g7604.t1 NODE_779_length_17789_cov_38.7706 . mRNA 141 4064 . + . ID=g7604.t1;Parent=g7604;Name=g7604.t1 NODE_779_length_17789_cov_38.7706 . five_prime_UTR 141 142 . + . ID=g7604.t1.utr5p1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 141 176 . + . ID=g7604.t1.exon1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 143 176 . + 0 ID=cds.g7604.t1;Parent=g7604.t1;5_prime_partial=true NODE_779_length_17789_cov_38.7706 . exon 346 480 . + . ID=g7604.t1.exon2;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 346 480 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 694 795 . + . ID=g7604.t1.exon3;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 694 795 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 1020 1113 . + . ID=g7604.t1.exon4;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 1020 1113 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 1361 1506 . + . ID=g7604.t1.exon5;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 1361 1506 . + 1 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 1610 1908 . + . ID=g7604.t1.exon6;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 1610 1908 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 2209 2325 . + . ID=g7604.t1.exon7;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 2209 2325 . + 0 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 2538 2601 . + . ID=g7604.t1.exon8;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 2538 2601 . + 0 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 2783 2906 . + . ID=g7604.t1.exon9;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 2783 2906 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 3099 3256 . + . ID=g7604.t1.exon10;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 3099 3256 . + 1 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . exon 3479 4064 . + . ID=g7604.t1.exon11;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . CDS 3479 3591 . + 2 ID=cds.g7604.t1;Parent=g7604.t1 NODE_779_length_17789_cov_38.7706 . three_prime_UTR 3592 4064 . + . ID=g7604.t1.utr3p1;Parent=g7604.t1 #PROT g7604.t1 g7604 CSTGRFGENCTVCPTCLNGAKCDAGVTGTGVCICALGFTGSRCELCLPGFYGPNCLPCPLCDAIGGTCSDSITGTGKCICKKGFKASLCDECGAGRFGSQCIQCPICGNGDCDTGRDGTGTCECRDGFTATYCNQCDVGRFGYQCDSCPACVNGGKCDEGIRGTGTCKCPVNYAGDLCEKCAKGYFGPDCRQCVQCDMDGGVCEDGLTGNGTCACNAGFQHTNGTSLKICDDCDGNSTRYGKLCTPCQSCGLHGTCRAGRAANGTCACDEGWMGPLCDQCALGFYGSSCMSCPRCQNGTCVGGVQGDGRCKCFTGYTGDLCERVCDQQCLNAQSSSPAKSSGGVSVGLIVGCVVGAIGIACVIAGAVIYRKRNAHYSWLGGKGASMGIRDFKKSFIVQKDGAGFGNVRSAVGETKVVGDKVFINESDLDKMPRALQELIYGNAEAGGIFENPLFEPDSSES* # ORIGINAL: g7605.t1 original gene structure, not modified by PASA NODE_779_length_17789_cov_38.7706 AUGUSTUS gene 4931 7018 . - . ID=g7605;Name=g7605.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS mRNA 4931 7018 . - . ID=g7605.t1;Parent=g7605;Name=g7605.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 6095 7018 . - . ID=g7605.t1.exon1;Parent=g7605.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 6095 7018 . - 0 ID=cds.g7605.t1;Parent=g7605.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 4931 5785 . - . ID=g7605.t1.exon2;Parent=g7605.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 4931 5785 . - 0 ID=cds.g7605.t1;Parent=g7605.t1 #PROT g7605.t1 g7605 MAHLVPARVVLRGALSAHGAFARLRCVRLLSRRQFGSTRAFADEFVIRHNGTVQRAADNSARTASPAATPTLTTADTQDTEASQDQFRKHPQRERNDRIKKEKAERFDRISKQGRLLRTIDNPEATFISVPHTLWRPAKADFCVLGIETSCDDTGAAVVDSRGNVLGEGHRSSVAEQALHGGIVPAVAAVRHAEFIDSVIETALKRSGKKITEIDAIAVTTGPGLAGSLAVGLGAARAIVRAHGIPLIPIHHIEAHMLMPLADNAVTFPFVALLATGGHCMLLIVKGYDSYEVLGNTVDDAPGEAFDKVARMLELDASSGGGRALEACAANGGDMCRYIFQPPMFDRRDCEFSFSGLKTAVRTVLEKGIHSAAAAAGDQGGLWQHVKKEHVAASFQRTVAVHLATRTGRALLYAAYAGGTARLPDKATKPIQFVDPARGRVPPLVFSGGVAANKTVRAALETVCRQLRTKMVCPPPELCTDNGVMIAHAAVKKLIHGNGGRGARVVVNRPLTPEEAATAPEDGFPEADSAGDLLSRLRYRTRWPLGKDIGSLVAAMGLSFHVPWGSCGNVSAGRTDMRAGGGGGAGGLRLRK* # ORIGINAL: g7607.t1 original gene structure, not modified by PASA NODE_779_length_17789_cov_38.7706 AUGUSTUS gene 9845 16063 . + . ID=g7607;Name=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS mRNA 9845 16063 . + . ID=g7607.t1;Parent=g7607;Name=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 9845 9902 . + . ID=g7607.t1.exon1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 9845 9902 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 10104 12478 . + . ID=g7607.t1.exon2;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 10104 12478 . + 2 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 12714 12848 . + . ID=g7607.t1.exon3;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 12714 12848 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 13219 13676 . + . ID=g7607.t1.exon4;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 13219 13676 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 13919 14492 . + . ID=g7607.t1.exon5;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 13919 14492 . + 1 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 14653 14886 . + . ID=g7607.t1.exon6;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 14653 14886 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 15374 15475 . + . ID=g7607.t1.exon7;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 15374 15475 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 15680 16063 . + . ID=g7607.t1.exon8;Parent=g7607.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 15680 16063 . + 0 ID=cds.g7607.t1;Parent=g7607.t1 #PROT g7607.t1 g7607 MDRGGGIGIPDSDAHAQSEKSGRRQWGAPADARPVIAPQRDAVPPRDAHVGARDPRGGDYDAYLAMLAERNRVAGKAGRSNSGGGSNSADGGSDGGMRKREQAFSAYVNGANTRAGHVGGHVGRRAPPAVVARPRPSSPAGVSAGVSAGVSVGVSAGVNGGTAISPTRGSGEYGVGAAVSRGQQQEGVAPSMAAGAAGRRRGWVKASVEIRTKSGESLRIHAPGRSRDTNDEKTTESADEAGSRAGSSQALSRARMRGGGDGGDADVARDVARGRIGLMGERSVSMPSLLSSRNPLPLNVTLGEADNNNAHCAPVCDAERRPVDGAGACVGVGAPAATIDDELLPWERPSTVLRTFLDGDARDLTGVGSGVAAELGGQSDPPTPVSRRQSRHASSGVAGVDTPPPSSRRASAFSRALGDGMSRDGLSSDALSHRSTSMPALNTVGKDAHGTGGGHVGEAVSASPSVEALRIHTHTQPHGSLDDVLRASLREGRRSPPVSVPVPASGGSGHVLGVRSSSLVSVLASASDPARDRGNASSRDVGLGLGLAEDDALTPLRSRVRSSSLRNVSGHQASAGGVSGGERGGGLMVGAVGGAAGNGIPVHSSVVVDHNDIEDSWDSLSHFLRTQVGRISVDKSMPARGNLQPNPNIIPNPRGANAAVARVAMPSEGEPSVSRAAESAPSVVSAGGASKMAVRASVTMTTTPVLPRGRVLQLNILSTHGDESYVGLNGIEVFCADGSLARTRRISANPADINVLPDYGRDPRVVTNLIDGVNRTCDDLHMWLAPFTPGGDHTVCIEFEEAVVVAMIRIWNYNKSRIHSFRGARDVELTLDGALVFAGEVSRAPGNIDDSEGLCDVILFTTDPDVLNGIAKNDGELRRQIQQEREASRAQVAHDRPSTAVRRSSADVTPLDAHAARPFTSAGPFPFKAVAHKHSRRDGGVQGNRQQPVNEGDGQAVVAGSGGIVPDIGTEGRAGLRGRVISLSLLSTWGGDLVSSVGLSGLAVLDEKRRVVRPAGMRMYIENADDVDLMNKHGDSLRRLLEAPNDTTDPECMWRAPITRRDGRLIPYRVALDLGSARAIGGIRVWNYNASVETSYAGVMLAAVHVDGRPLFGGAPVVLRKAPGSDACDYSQDVMLCEIASLVDRSVHLEPTEMVSVAAMAVQRGPSVSTSSQSVLASYPECASSRDYEAPATPSGMLVQVRINSTWGDADYVGLNGIALFDPAGRLLSPHRVMCCPDSVNAVAGVRGDPRTPEKLMDGVNDTWDDHHMWLAPFVPGEANVIYMLFESPVCIGLATLWNYSKTPSRGAKDVELFVDDAVVFQGCLQPAPRPPVEGEGPRNRLFGQTVSFLRRHRGSIPQAANERPSSQATSFPVTSTASASAGVGVGHNGQDVQLIDNGRVIMPWAEPHLQMPRTNNAHRPSTTATQAFPAHRRASAHV* # ORIGINAL: g7606.t1 original gene structure, not modified by PASA NODE_779_length_17789_cov_38.7706 AUGUSTUS gene 7378 9220 . + . ID=g7606;Name=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS mRNA 7378 9220 . + . ID=g7606.t1;Parent=g7606;Name=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 7378 7447 . + . ID=g7606.t1.exon1;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 7378 7447 . + 0 ID=cds.g7606.t1;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 7656 7827 . + . ID=g7606.t1.exon2;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 7656 7827 . + 2 ID=cds.g7606.t1;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 8207 8350 . + . ID=g7606.t1.exon3;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 8207 8350 . + 1 ID=cds.g7606.t1;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 8779 8932 . + . ID=g7606.t1.exon4;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 8779 8932 . + 1 ID=cds.g7606.t1;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 9059 9220 . + . ID=g7606.t1.exon5;Parent=g7606.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 9059 9220 . + 0 ID=cds.g7606.t1;Parent=g7606.t1 #PROT g7606.t1 g7606 MSSFNNSGVIIDALPYADDDYTPDVANAVQAMIQSEMKTFRPRDYLAHLPPVPKLTFENDPVLAAEFERHVEWRVEFTPLLLKSKTAMEKLDMGRYELPAPPPASKNDLASWQAAVSNSRAQLEHQTLRIVNLEIFSEYGTNAWKAHVEGLKQTSESLNRSLNAMQQEVDEINRQRKNEQLGVRGKLIDLEERWWTHISKNYELELACLHLEREVEHIKRQYGLHEPDGQQQH* # ORIGINAL: g7608.t1 original gene structure, not modified by PASA NODE_779_length_17789_cov_38.7706 AUGUSTUS gene 16566 17300 . - . ID=g7608;Name=g7608.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS mRNA 16566 17300 . - . ID=g7608.t1;Parent=g7608;Name=g7608.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS exon 16566 17300 . - . ID=g7608.t1.exon1;Parent=g7608.t1 NODE_779_length_17789_cov_38.7706 AUGUSTUS CDS 16566 17300 . - 0 ID=cds.g7608.t1;Parent=g7608.t1 #PROT g7608.t1 g7608 MGAEKRSLEDAALDCDAVIDTKRARICESDSVTELKDFVTTALASRDAWKTRAEKVAADAAALRMKLAAASAIDLTAASEPAKEPNPSVVPPQPARAPTEPQRPPAVPKAAQPMTDKQAAAAMKRTVSTTLHTIGKAIRKQLRYTNGGSIVQGKITAEQANISIEMLRLMFPDNAAELSGQPTKVVDFCIRGEYEDIFMTPLSGRADGFGSIIVGQEAGLRAKYNPKTQTLKLSGFSEYDCGSY* # ORIGINAL: g6715.t1 original gene structure, not modified by PASA NODE_3062_length_4425_cov_33.4393 AUGUSTUS gene 1 4270 . - . ID=g6715;Name=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS mRNA 1 4270 . - . ID=g6715.t1;Parent=g6715;Name=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS exon 2839 4270 . - . ID=g6715.t1.exon1;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS CDS 2839 4270 . - 0 ID=cds.g6715.t1;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS exon 1966 2529 . - . ID=g6715.t1.exon2;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS CDS 1966 2529 . - 2 ID=cds.g6715.t1;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS exon 1547 1632 . - . ID=g6715.t1.exon3;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS CDS 1547 1632 . - 2 ID=cds.g6715.t1;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS exon 921 1248 . - . ID=g6715.t1.exon4;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS CDS 921 1248 . - 0 ID=cds.g6715.t1;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS exon 1 819 . - . ID=g6715.t1.exon5;Parent=g6715.t1 NODE_3062_length_4425_cov_33.4393 AUGUSTUS CDS 1 819 . - 2 ID=cds.g6715.t1;Parent=g6715.t1 #PROT g6715.t1 g6715 MELEIGSRLANVESFELEFDEKTAKAKLEMGLAEARVRTEVIELRAAELSALERINTPDDVSSAVSNVDYVGRGYHLVQGDPNAPGGNIDPGFRKPVVKLGFKQRKRSGDGTALIPDNVDFRRITSTSVSSSEHFLSQASEYQKMCDIDVEVSGKTNAGVVTMRFSASSSYKTMSQSIMESESLNVMQISRSTNYLVSMTNMDPELSDEFVSALYALPDAECCIPGGRSILMPCAELCARYDEVVEDYGMFYVTETSLGTKTIRQYSVTRTFLEKMNSLSVGVKSSFEASGAGNSGGVSMSVNIQETAKTMNEERSVSQTGFVYGGNPSKAKFNTEDYSDIQGLLDHAASGKENALPINYKIKSIADILTADKLPKLSLSQFTAMKRLLIKTMEDTCVQGGASCSSERDNSALAVRLNDISFLILGSFSDGLMRLSVATTDDGTSSLGIKYDMVDKSSNSSSNGTNIPTSSSGGFTAKAKMEPILGTICAPYAEKVGSASADPKWLWLPWPRWLLSDQIGIEWSPGLFGSYLMFLTFKQRQPGKAGTMDTTTEAECRKECEDNELCLALTYLSSNSYWDITTRCILFGQNFYEYEVKSNSIFGPTRPNKDIMFPEGQTRPIIDEFRRPVDNLNDFNYGWSCSTNPNKYESWVSLKMISFKKTVTSGGTNDLFKLVSPYTSLIKLATRRGDPMRAIHFGEAFYLVSATSGFLSVKTHAATGSTHTLGSVKASPMIPFNPAKPEGYAPPTKFVFRHDTKVTGDIVNFGDVVFLDVAPGSGVNFDNNIWFDGEAAFRFGQYPSNCRNTTTNSVDKFILIQDDQCTGIFLNDNLGVTAAKFITKLTLLRPTMGNYAEKFVDRVAQITVSLATTLSSESPMQVTVTVQFNADVIRARAGNNLNAADSTKLDAKSAAALLLNNDFVFSLSSGGVLATAIDQEIVPNGRAKSFYKLQLTFTRAIRAGDVLHLGFATPDLLATEYGAKLEAQPESGPKTWPISLYPDINFICTLGACSQIPNAPSNISCLLDIRFSDPVLNAEAQLLGRSDFIMTVGGNVTDITLERIGYVKEWKNATARSMYS # ORIGINAL: g2981.t1 original gene structure, not modified by PASA NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS gene 1 1002 . - . ID=g2981;Name=g2981.t1 NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS mRNA 1 1002 . - . ID=g2981.t1;Parent=g2981;Name=g2981.t1 NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS exon 812 1002 . - . ID=g2981.t1.exon1;Parent=g2981.t1 NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS CDS 812 1002 . - 0 ID=cds.g2981.t1;Parent=g2981.t1 NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS exon 1 292 . - . ID=g2981.t1.exon2;Parent=g2981.t1 NODE_4815_length_1231_cov_25.981_potentialcontaminant AUGUSTUS CDS 1 292 . - 1 ID=cds.g2981.t1;Parent=g2981.t1 #PROT g2981.t1 g2981 MSGHLFLRVLVCAALLCTALGQDKFNGCPSPLGGGWVASTPSAVEFTALCASASSLKAAGTNYTMTSITCTPGSDAKTFNLIIVFSTVDGGAASGAGVVVMPDDAIEGTLILSVSRGGSDIVNTAVLTRRPEDKAATTPRALLAVDLCRLNSTGGVVPVYP # ORIGINAL: g12774.t1 original gene structure, not modified by PASA NODE_3709_length_2911_cov_40.324 AUGUSTUS gene 129 2590 . + . ID=g12774;Name=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS mRNA 129 2590 . + . ID=g12774.t1;Parent=g12774;Name=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 129 315 . + . ID=g12774.t1.exon1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 129 315 . + 0 ID=cds.g12774.t1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 611 814 . + . ID=g12774.t1.exon2;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 611 814 . + 2 ID=cds.g12774.t1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 1016 1200 . + . ID=g12774.t1.exon3;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 1016 1200 . + 2 ID=cds.g12774.t1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 1433 1530 . + . ID=g12774.t1.exon4;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 1433 1530 . + 0 ID=cds.g12774.t1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 1827 1977 . + . ID=g12774.t1.exon5;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 1827 1977 . + 1 ID=cds.g12774.t1;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS exon 2192 2590 . + . ID=g12774.t1.exon6;Parent=g12774.t1 NODE_3709_length_2911_cov_40.324 AUGUSTUS CDS 2192 2590 . + 0 ID=cds.g12774.t1;Parent=g12774.t1 #PROT g12774.t1 g12774 TAGLEKGAIRIFPGNGVPKTGDEFRSVFVSTMTKVPNVIKMALDQFAMSQDAGKFSLVEFFNGKERVMADHESPLTVANAKDNVKIYLTRDDNQARAKISGRGQTMLSKAVWSMLGETPENSFCADCNASDPQFVCVNRGMLLCHQCAIVHHRISSVFFEAAQRASTAASAPKFFSKIRSINHCPWTEELIMFINHAGNALLNDVYEHTIVYSIEHTKPLPDATSAERERFIMAKYIDRLFVEPYHQASHSVAGPDGWVEFKDSDLDDIVRAMGQGLYDAAAANDLRSIIRLLALGVEINFSLQDEDAAGKTPLFAAASAGNLPALLILLENGADPCAVDGDGHTPLYYCALNAHASAQKVMTLWQLAHRVGAYPPPGDPAKLKLGKLSFGDFDNLVMDVLSEVQDR* # ORIGINAL: g657.t1 original gene structure, not modified by PASA NODE_537_length_21608_cov_43.4587 AUGUSTUS gene 4569 6080 . + . ID=g657;Name=g657.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS mRNA 4569 6080 . + . ID=g657.t1;Parent=g657;Name=g657.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 4569 6080 . + . ID=g657.t1.exon1;Parent=g657.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 4569 6080 . + 0 ID=cds.g657.t1;Parent=g657.t1 #PROT g657.t1 g657 MAFFFRVLLLAACIACVFGMAIRAEEDPSNSTLPDSSDGEADQLSAHDKRVLRNGKIGLIVALGISTFLASLLPWAIHRLKNSIQIMRISCCVAAGVILGAAFTHMLPDAAESWQTYFELAGTSGLRNPDDAGYPFAQMIAMFILILLIAVDKIVIAKGFESTGHGHGHGHDQGSHGGHGHSHVIPTLPADYLAATKKDKKAAEVMPRRFTNTSNNTDDLPVEEGQVEVRLHASYVAGSPSLSVRTFDAASPVQPRHPPTTYGTLDGCNDKENSQQLSTIAAASSCAAAVNACMGVEPCRPIACVSDVPSKTDYDGDVDSSASATATAIAAAIASANSGNQVPSEDDTARGSRTQIAQAWVFCAALSLHSIFDGLGLGAETDTKGFYALIVAVCAHKLLDGFALGVPVYFAKLSWKQTLSALVFCASMTPLGIGIGWAATSVYNGPKAHLAKAIIVSMSAGSFFFISLIELLPGGLADGKHIAIKVGVTALGAGVMALLALWV* # ORIGINAL: g661.t1 original gene structure, not modified by PASA NODE_537_length_21608_cov_43.4587 AUGUSTUS gene 15695 17776 . + . ID=g661;Name=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS mRNA 15695 17776 . + . ID=g661.t1;Parent=g661;Name=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 15695 16864 . + . ID=g661.t1.exon1;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 15695 16864 . + 0 ID=cds.g661.t1;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 16975 17079 . + . ID=g661.t1.exon2;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 16975 17079 . + 0 ID=cds.g661.t1;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 17180 17283 . + . ID=g661.t1.exon3;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 17180 17283 . + 0 ID=cds.g661.t1;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 17377 17776 . + . ID=g661.t1.exon4;Parent=g661.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 17377 17776 . + 1 ID=cds.g661.t1;Parent=g661.t1 #PROT g661.t1 g661 MWAPTHILIELPPTMPATDQKRAVDKVEWGVGYARRFIQYVAETHGLDFVFVLDDNIPHMVELELPLNPFVRDDGTTSRVFATKPCSLWTVLERLQSQVEGTLVNGDEEAIFQAGKAPHPDTDHPLWSYTGPPSNYALIGTARFKHRAITRKPFKMTHIHSFSLLNVRAIHDSPAAPLYEPWPYREDIDFNYQCANAGFSLCKYNRFVQLKEPTRIARRDGGGGGGDRERAGALDDIEVVPWLPDMGLIDTDGEDGLTFSDQFQALAREARASSWSFNETCPVDQADRNALSSIVKGAPSMTSAGQIFAARDMGLYLIPLAVLQSKGRPFYALIVLNKSNPADRQLEINGILTSWTKDRSLWCARRKGNSGRTGTVLILLAKNEDAVALTASGQSGTTSIVRPARPVPPARKSGSLREPRAEARKLELLDPAVLPYMKGSTVQVTAWGDPSKCYTAENRRGEQEIIFGGYRATIETSTGLLDSKGDKFRNGEKLRFTVEFAIGVDGKPEFSCVPETPLQDARSKGFDVVKGLAKWGKGTESTCGGAFGSCLKQNFQKYSKEFSSVKSFFCLEDSEAQEYLKKLAAGKLPDAS* # PASA_UPDATE: g658.t1, single gene model update, valid-1, status:[pasa:asmbl_8028,status:3], valid-1 NODE_537_length_21608_cov_43.4587 . gene 6360 6957 . - . ID=g658;Name=g658.t1 NODE_537_length_21608_cov_43.4587 . mRNA 6360 6957 . - . ID=g658.t1;Parent=g658;Name=g658.t1 NODE_537_length_21608_cov_43.4587 . five_prime_UTR 6955 6957 . - . ID=g658.t1.utr5p1;Parent=g658.t1 NODE_537_length_21608_cov_43.4587 . exon 6839 6957 . - . ID=g658.t1.exon1;Parent=g658.t1 NODE_537_length_21608_cov_43.4587 . CDS 6839 6954 . - 0 ID=cds.g658.t1;Parent=g658.t1 NODE_537_length_21608_cov_43.4587 . exon 6360 6642 . - . ID=g658.t1.exon2;Parent=g658.t1 NODE_537_length_21608_cov_43.4587 . CDS 6453 6642 . - 1 ID=cds.g658.t1;Parent=g658.t1 NODE_537_length_21608_cov_43.4587 . three_prime_UTR 6360 6452 . - . ID=g658.t1.utr3p1;Parent=g658.t1 #PROT g658.t1 g658 MTHSVSRVRESALAMAELTDDQVALLCELRATVHVARQVNDQLRVLVSTTGKEGVFGAAQGQSLDSMESWTRLFNAAKDASSANQEAADAVTEKDPSSAKR* # PASA_UPDATE: g659.t1, single gene model update, valid-1, status:[pasa:asmbl_8030,status:12], valid-1 NODE_537_length_21608_cov_43.4587 . gene 7140 8332 . + . ID=g659;Name=g659.t1 NODE_537_length_21608_cov_43.4587 . mRNA 7140 8332 . + . ID=g659.t1;Parent=g659;Name=g659.t1 NODE_537_length_21608_cov_43.4587 . five_prime_UTR 7140 7174 . + . ID=g659.t1.utr5p1;Parent=g659.t1 NODE_537_length_21608_cov_43.4587 . exon 7140 8332 . + . ID=g659.t1.exon1;Parent=g659.t1 NODE_537_length_21608_cov_43.4587 . CDS 7175 8332 . + 0 ID=cds.g659.t1;Parent=g659.t1 #PROT g659.t1 g659 MNVVKEIERINAAEARRGVDGTSGSWHSQYKDSAYVFVGGLPFELSEGDIIAVFSQYGEIVDVNLVRDKTSGKSKGFAFVAYEDQRSTILAVDNFNGSKVLGRTLRVDHVANYKPPKEEEEKDGVPVEPSGRMKIGELYPGEVPESLRPKVDVDADGEAARKREKKEKKEKKKERKEKKREKMEKNLADAGGVSSGDDAEPATVEGPPSAHEARDTRPAVASAGHVVRSASADMDAPVSPMRRSGTDKDPHGARDSASRDRERSPVRRVVDEEENAVRRDRSDRSDKFRDERGRDRSRERSNALRAPAERSRGMDGRYESRRRSRSRSRSRSRSRDRRDDRRDDRRDDRRGDRRGDRQSEDRRTSDRRSRSRSPRRDRSRERSRR* # PASA_UPDATE: g656.t1, single gene model update, valid-1, status:[pasa:asmbl_8029,status:12], valid-1 NODE_537_length_21608_cov_43.4587 . gene 38 3426 . + . ID=g656;Name=g656.t1 NODE_537_length_21608_cov_43.4587 . mRNA 38 3426 . + . ID=g656.t1;Parent=g656;Name=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 38 305 . + . ID=g656.t1.exon1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 38 305 . + 0 ID=cds.g656.t1;Parent=g656.t1;5_prime_partial=true NODE_537_length_21608_cov_43.4587 . exon 446 473 . + . ID=g656.t1.exon2;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 446 473 . + 2 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 642 690 . + . ID=g656.t1.exon3;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 642 690 . + 1 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 872 895 . + . ID=g656.t1.exon4;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 872 895 . + 0 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 1050 1129 . + . ID=g656.t1.exon5;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 1050 1129 . + 0 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 1285 1333 . + . ID=g656.t1.exon6;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 1285 1333 . + 1 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 1661 1774 . + . ID=g656.t1.exon7;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 1661 1774 . + 0 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 2024 2093 . + . ID=g656.t1.exon8;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 2024 2093 . + 0 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 2405 2527 . + . ID=g656.t1.exon9;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 2405 2527 . + 2 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . exon 2755 3426 . + . ID=g656.t1.exon10;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . CDS 2755 3089 . + 2 ID=cds.g656.t1;Parent=g656.t1 NODE_537_length_21608_cov_43.4587 . three_prime_UTR 3090 3426 . + . ID=g656.t1.utr3p1;Parent=g656.t1 #PROT g656.t1 g656 FRGTEVAIKMLKAQAGISNSETLKEAPVEDRAVAEQMAAGRIGQAITATVANKKRDETIGSKFSEIFSSFMKTHTLKTQREDHGRAELAEFLAEIDIMCNLRHPNVVLFMGCCDKPCYVIIQEFMGGGSVLDAFAAKPNWNLVMRIQMAIDAARGLAYLHSNTPPILHCDLKTPNLLLDRNLVVKVSDFGLARMKYANTMITGQVGSLLWMAPEIMQGEAPTYTWHADVYSYGIMLSEFVTMERPYEVYRENGEIASNEELFMKICMQDFRPSMPASCPLKLSRLTRECWDFRPTNRPPFEVILQRLLEIKEAVSSGAAITGTQVDLVKVSRSAAASVANLGQNVSQSMPKLNRRGSRLSTKRDSNPAIYGDDLNMEEL* # ORIGINAL: g662.t1 original gene structure, not modified by PASA NODE_537_length_21608_cov_43.4587 AUGUSTUS gene 18709 21432 . + . ID=g662;Name=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS mRNA 18709 21432 . + . ID=g662.t1;Parent=g662;Name=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 18709 18798 . + . ID=g662.t1.exon1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 18709 18798 . + 0 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 19142 19273 . + . ID=g662.t1.exon2;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 19142 19273 . + 0 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 19460 19897 . + . ID=g662.t1.exon3;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 19460 19897 . + 0 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 20225 20325 . + . ID=g662.t1.exon4;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 20225 20325 . + 0 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 20517 20569 . + . ID=g662.t1.exon5;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 20517 20569 . + 1 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 20835 21314 . + . ID=g662.t1.exon6;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 20835 21314 . + 2 ID=cds.g662.t1;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 21401 21432 . + . ID=g662.t1.exon7;Parent=g662.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 21401 21432 . + 2 ID=cds.g662.t1;Parent=g662.t1 #PROT g662.t1 g662 MGNENGRLQQPMSRQSSTGGKAPVADVSKKFTKALSYNMKLVIRGDRAVGKSALFHRLQGGPFVEKHEPTPEIQVSHIYWSYKVTDDVVKIEVWDVVDQARPKQTGLKLADDAGELRLDASFVDVYRGAHGAILVLDLTKRWTFDYVQREAEKIHKNIPILVLGNMCDKQGDRKVTADEVTAWAESLDRGFIRYAEASMLNMYGLRYVHRFLNVPFLNLQREALMRQVETNGREMKATLEELVLVAGVEQNYALFLENLEKATAPAQKPEGAATPEGALSPTGSFVGRGSGQETPRQPASPQSAVKGMTTSAKTAASAAQQQQQQQQQQQQQQQQQQQQQQQQPSQTQPAQQPPKQAQQSTSQAQAHPTKGLRAPSAAAEPSVTSSNPTQPQTVTSPSPAPAPEAKSGGFFKRFSFRSKPAEPKKADAPAAGPILQQFCVV* # ORIGINAL: g660.t1 original gene structure, not modified by PASA NODE_537_length_21608_cov_43.4587 AUGUSTUS gene 11194 15661 . + . ID=g660;Name=g660.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS mRNA 11194 15661 . + . ID=g660.t1;Parent=g660;Name=g660.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 11194 11425 . + . ID=g660.t1.exon1;Parent=g660.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 11194 11425 . + 0 ID=cds.g660.t1;Parent=g660.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS exon 11523 15661 . + . ID=g660.t1.exon2;Parent=g660.t1 NODE_537_length_21608_cov_43.4587 AUGUSTUS CDS 11523 15661 . + 2 ID=cds.g660.t1;Parent=g660.t1 #PROT g660.t1 g660 MALFASSPNGRTMATGLSNDNTARLYDVDVVTGEFRRVENGAGPRGQKRPRSEADPSGVEDQRLLRPRLDSPESAPQVPSVSDEGSQLASLEDAVDELGKTQHQAVKFAQPAAGERIIIVFAQNSESFEPGELAGVEDQLGAPLPRDTVVVLTACPSSTSEDTTSRAARIGGFRNRVYNFMDILCDSEEKSTMCARYNVPDVPKSHKELLLYKNEVNDCVSKLDCQTLKAFVNPGVELRWVAISGNGDAIRDVFHKFQALQIPFVSEVLSTIDKRIATARQQAEPDEVLDIPDEEEAKDLLTSVEKGLGSLPEQLPVPSSLQPRAESAAPARTDDRPFPSQQRLGNILFDRIRAALSAKDPDSGGMNKYDRVVFRILTANFKMLEEQTAIRLKKLGLFDESQHVIPVESFPAKPGSGVDRNGFSDDINKRIANFYAQLISDPHALGVLIVDECHWGATAQQAYDMFVNLTLQNAESDCKLKGAQDWKTRRQDLSTLWRQKYGSDLVSSHQIGNLVILLVSATPYNQLSLKSRVPIRHLSEGGMLVGEEDASTEVRDAFVVDWSEGQDCNDEVLMSEPFRLMVALQTSMDQNAVNAGNAGFKADVKAASDFFVVAVSDVFPPKLTCAKVEGVGQPVDIAARLPSKYHDFAVERMSDDGRKMSVISVRTDADDNSLRLFLAVDIGQLYLTSDVNRAAEFTVYRRIAYDVVRIEYRDTNGNVMGVLAVKQDEFGPVLTLAPPLSTITTEFILVPSLPAGDENRKDVPFYRSVNYFVNSMRNADAELQLIRRDRFVAMMMTTEFSRKAAGSAKWMKMDTFLACDYVYSIVRFATFNRMTPEGQTRQANQVTFRPTDVRVHDLLNAKANWWNDRATEAWRVLQEVEREMDLPLSPYLHRYAEIVSDEGAWANLLNAHVLAKCCNRPVSELWQRARDMLCADLNLAAESYNKSRTETDIIVESLIMDNADRFGRMRGSMKIVRMEDNSTARKFYGSVLRATMKVGLGKTYHVFCDTSENTLDSAFCPDSKVDPAVEEVKKFWLTMLQPDGCRIDNCRCKNFELASVVNGEWVCNDCSHLHHAVAQYEDLLGLPCILVLVDKGRMGDTFPASLDCMDIRSSHSNEDAKSPHVLSTVVQELGRMCRYAPAGAKVPYALVGGALHRRLLNGLANGHFAIREILKKHDAKLATVNTKMQDEFPWRYAVNPASDHFDFATRDGPREHFGRLVLQAEPQVGKTGTYMWLLRRLVDEIQGERIAIPPGPKIDDDDADEKKWAYPYWQDILGQHLPEALGRSKYDVIIGKKYRSLNADELEGLAARLEIMRQEANTTAAAAAAAAEATGSCLKLVPFVAEEFPFEIQRFRGTSAEAASRPSHAIEGQLRVQMRDRGELFARVSVPRGQVNRLVRQVTSTETAGGGAVFELNGNLTEYDVHYWIFQPSHRSDGAVRARLDLTRAVPDRKYA* # ORIGINAL: g13395.t1 original gene structure, not modified by PASA NODE_1015_length_14675_cov_37.1804 AUGUSTUS gene 174 14473 . + . ID=g13395;Name=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS mRNA 174 14473 . + . ID=g13395.t1;Parent=g13395;Name=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 174 239 . + . ID=g13395.t1.exon1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 174 239 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 527 658 . + . ID=g13395.t1.exon2;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 527 658 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 892 1102 . + . ID=g13395.t1.exon3;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 892 1102 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 1456 1693 . + . ID=g13395.t1.exon4;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 1456 1693 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 1999 2847 . + . ID=g13395.t1.exon5;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 1999 2847 . + 1 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 3044 3119 . + . ID=g13395.t1.exon6;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 3044 3119 . + 1 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 3611 3642 . + . ID=g13395.t1.exon7;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 3611 3642 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 3891 3955 . + . ID=g13395.t1.exon8;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 3891 3955 . + 1 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 4247 4309 . + . ID=g13395.t1.exon9;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 4247 4309 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 4594 4731 . + . ID=g13395.t1.exon10;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 4594 4731 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 5328 5526 . + . ID=g13395.t1.exon11;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 5328 5526 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 5888 6263 . + . ID=g13395.t1.exon12;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 5888 6263 . + 1 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 6608 7811 . + . ID=g13395.t1.exon13;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 6608 7811 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 8196 8968 . + . ID=g13395.t1.exon14;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 8196 8968 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 9274 11290 . + . ID=g13395.t1.exon15;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 9274 11290 . + 0 ID=cds.g13395.t1;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS exon 11550 14473 . + . ID=g13395.t1.exon16;Parent=g13395.t1 NODE_1015_length_14675_cov_37.1804 AUGUSTUS CDS 11550 14473 . + 2 ID=cds.g13395.t1;Parent=g13395.t1 #PROT g13395.t1 g13395 MTTAMDAANEELNRNVPDEGSQTTRRRDIIVGSAVDITPKPGLPTKLLGAWRHASQLINIGMGIIRKVMQIVKAVKTAFTTFKNGIGYISKAFEVITKCPLTAIIVVVETIIAMIASVIDVVHGLLSLLDTLGLTGGRTSIFVQIKMLYKRMLFSWKVTDDNPPEVATQSSDITAIIMPIYKSIKCPNGNTIYSEMTKMTAIKSEITGVMASFRRMKDTLAAGFQKLFGSKFHGDFPKKLRSCQPSTVCVKERTCDTKTCGTCGCSGVWGVARLDPDRLCRGESFAEIIKPVTRAGWELDGQKDAYSYPDGIDILVSPNQQIAAPFKAAVSAYHLTDKGGKGWVEIRGTDGYFKNKYMRVDHVQLMQGKARVDSELTEGKPFAIASSSMSELCGKDVSPFIHISFYTYDGSTRVVEDPTPFLPKKLLDDLIPKVSANQIYLNFLGMPIVKPRPLTEAMSSAGAALRDKFSKKKDAKRSVDDVSISRMRRDGSSDEDVCSAQLVNLPDACVDTGSLQPIFTKTFVFLEVQFTYLVGPVALTVRVSVAGRMGVYYKLKGTLSIAPKFAVDVTISLEVNIGFARAGFMIQGTVIDTTITGQAIVIFSKMPPGLCIAGDLDIIPLQIVWGWSSGKFSIPDFMRACLDDTDNTPPKFYVKGDDGVPTPCQGVQECFTALMEPNTPANEAKLRIEWDIRDDETDVDEIRYAVGSKPDDITFTGGWERIQSGSGVSVAIQAPSGAELTVTVKAKNKAGKESTHSVTPQRRVMRRVAGAVGGSGETVSRPLAWDLTPPEITVTLSPFQSHPSTVSASYVVYDETPLVNVTWSVGTGISQDDLSAWALADGISGTFRTDALGGRLVHATSYYVNVRAYNELGYVGNGFAVVTIDYTPPVADLSTVLHGVIPGADFPFSVRQRYLSVNFRNFWDDESPMLTYAWAASTKECVLDIMEFRAPKIPPMPASRMDFVTGDYGFLEDLPAGEYFLTVRGTNVVGLTTNVCTRMRIIDDTAPKVSPPGISYDFELHAIPVDVDIWDYESGIAGMFFGLGKSPNDATVIPFTDLSDPSTGKLVYFDIPSGVRLYGKVLVNNGAAMQSYVAAKQVLVIDSSPPTQGTVADGAFPFADVAFQSLDTQLTCAWQGFIDQESGIDRFEVFFGTALGSCNTATLVNIPGANVTIDGGADDRFASVQTPIVHGSTYYCMVVAYNAAPNHLRVTGCSDGVTVDTTPPVAPTAYVDGLDVASAVDTDFQSSASQAAASWAPFTEDVSGIASQFVRLWDVTTGVGVAAHGVDADFFFPILPTDTSVIMYGLSLVQGHAYRTTIRAFNGAGTFKDVTTSGFMVDSTPPAFDYFKVDGQAVTSVVLYRKLDAPVTLTWNFIDNESAVDTNEWSFLDAATGEVSFSSNGPQKAREGEGTAATIDASKCAVDSCINAGRNYYLTATAVNKAKLSSARKSATIVFDDSPPTITSVVVGTNDEDQETEVVTASALRVQWTAHDMETPILRSIVSLHLCTGADSLTCSKVLSATVEMDGLNEGAYAFAASALPAKLEENQVYRFHVTAVNAAEMTSTQEKVSSPLKIMRLPVAGVVYDGAADEETSFTTDPTQVVASFSGWDSEADPIGHFEWAIGTDAEPESLQLFTPFGIDRTSEGAGNCVLPETLADMHAYRVTVRGVCNTGRVLDSRSPGFVVDREAPQFVWANVGRDSAAVWGLVHPGVFAATSDFQFSWNFTDGGAGTTSYDISLGKFPGDTSLTSTVVVQPIYSGTLTPAHVRDLKGSQVLLSIVAHGRNGIASGLFESPGITVDTTSPLRGEVTCPTAQTATDSLACSWIGFSDPESPIASYSVSVGSTLGGRDALVPVSLPGTARSYRATKLTLADSRVYFVDVTAYNSVRLSVTGSSAGTLIDATRPGDGVVHLRALGGTPDSPASCQLDRMRFTVDWSGFVDSNGLDRFELSIVRGELPGGDGSSDIIYGPVSLAPDAASAVASFESALATDIDYYASVKAINHAGGWMQARSASVRMLRDEGSSLLSHEVRDGLAENDLQVLATSTAFSANWDVEDACGVVEYKWRVVCADGSAVTDFASTGLVPYGSVFGLSLANGVTYMAEVALHNGAGTVHYLRSDGALISSDRPTPGLVNDGPTSGTDIDFQGSVYIVSATWSGFRSTAGQTLTYEAAIGTLSSGAVDDMASFRPVALDGVMVVTFNLASPLTPLTRYYVTIRCSTGTGASTSGTSNGVIVGFGAAPVAGYVYDGDGSRVEDVNFQRSADALSARWTGFSDIVLGIVRYEIAFGTDQSMLNRTVFDISNYTSVGMKTSATQTGLSLDTSGRTTYYAFVRCINTGGQGTVVSSNGVRVDITPPSVDPSALAWAFAPASRRGLPTAAQYQSASNGLAISWSAGNVSAVADVESGMESYTVRFERVFSDGRTSLVSTVSVDGSQTGASALGFSLADGEKYTAEIVAVTGAGVVVTLLSNPVTIDTSPATAGSVRDGAALTVDGVTLIDVDAQYQSTLLSISAAWVEYDGSAEGLCPMEADAFAAPTFKAARAGWKPVAAGIALSTIFTMSLQPARVVRSEFSGIEILVESDAETIFSGAYQTSVPRRQGEYWVRVRPASISGLVTSFSVWDTGALPVGLSEPLPDFLAEFPQQTLWREADGIGGIGIQIHPHAQLVLGWVMSARTRVASFVVLVNGTEPWTRTSTFDFMVGGDGSVYWTVDGRSVGASNGAPRLVSNLIRAAVWPFGNAMPASTIIIPPGTRDKATFEAVGMPAAADADQCDGAPVFSDRSSPILAYEMGVGTTKAAPNTLDFRPAVDAGACVPCLPQWVGACDANCSTDARVLTGTLSKGILLAEYACPGGYEEMYAIVSVNATIITTTGILRDSNDVLDAIVLLNGPGELNTTSLADSGKSIESVCVDVDECLLVQSPCHPVAACKNLFGSFTCTCGDGLEGDGVGPFGCHSPHAICSALGCACMRGYTSVEGDFLTCDDVDECLANTFTCDPNADCVNTPGSYSCVCRSGFMGDGSTCAPIGAACVLGSELHFTRSTDGVPTALAVAPNAFDQTDVGCRVWSDGAVVSKGMWSRLFAISPTITVHSCITVTPSTVPMDNLRAVIFAFAGECAKWGL* # ORIGINAL: g8194.t1 original gene structure, not modified by PASA NODE_4579_length_1434_cov_37.3436 AUGUSTUS gene 148 1094 . - . ID=g8194;Name=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS mRNA 148 1094 . - . ID=g8194.t1;Parent=g8194;Name=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS exon 851 1094 . - . ID=g8194.t1.exon1;Parent=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS CDS 851 1094 . - 0 ID=cds.g8194.t1;Parent=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS exon 471 579 . - . ID=g8194.t1.exon2;Parent=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS CDS 471 579 . - 2 ID=cds.g8194.t1;Parent=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS exon 148 189 . - . ID=g8194.t1.exon3;Parent=g8194.t1 NODE_4579_length_1434_cov_37.3436 AUGUSTUS CDS 148 189 . - 1 ID=cds.g8194.t1;Parent=g8194.t1 #PROT g8194.t1 g8194 MSTYLLAFAVGDFDHVEGFTKEGVCVRVYTPVGQKEEGLFGLDVAVRTLSFFTSYFGIAYPIKKLDLITVPDFAAGAMENWGLVTFRTALLLYNDKSTPIEIKQRIAYVIGHELAHQWFGNLVTMEWWTHL # ORIGINAL: g2322.t1 original gene structure, not modified by PASA NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS gene 1546 2393 . - . ID=g2322;Name=g2322.t1 NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS mRNA 1546 2393 . - . ID=g2322.t1;Parent=g2322;Name=g2322.t1 NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS exon 2324 2393 . - . ID=g2322.t1.exon1;Parent=g2322.t1 NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS CDS 2324 2393 . - 0 ID=cds.g2322.t1;Parent=g2322.t1 NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS exon 1546 1994 . - . ID=g2322.t1.exon2;Parent=g2322.t1 NODE_3747_length_2841_cov_42.1229_potentialcontaminant AUGUSTUS CDS 1546 1994 . - 2 ID=cds.g2322.t1;Parent=g2322.t1 #PROT g2322.t1 g2322 MKNATSMSHGVLLFAALLQFTWIGANAATLSASTITLPFVLASVESGDTIQLAAGTYSSIINRGPIVIRNKTLSFVRNPSALTAPIFSCRTVLSASQAAFSSAFNVQLGANVSFVGITFKSCGRGGIVTPTRFGIEVGHNETNAETPGASQSTVSFTDCIFTSGYGSVTFLT* # PASA_UPDATE: g10637.t1, single gene model update, valid-1, status:[pasa:asmbl_5087,status:12], valid-1 NODE_2829_length_5040_cov_36.5343 . gene 628 4864 . - . ID=g10637;Name=g10637.t1 NODE_2829_length_5040_cov_36.5343 . mRNA 628 4864 . - . ID=g10637.t1;Parent=g10637;Name=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 4673 4864 . - . ID=g10637.t1.exon1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 4673 4864 . - 0 ID=cds.g10637.t1;Parent=g10637.t1;5_prime_partial=true NODE_2829_length_5040_cov_36.5343 . exon 4260 4469 . - . ID=g10637.t1.exon2;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 4260 4469 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 4003 4080 . - . ID=g10637.t1.exon3;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 4003 4080 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 2737 3627 . - . ID=g10637.t1.exon4;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 2737 3627 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 2243 2428 . - . ID=g10637.t1.exon5;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 2243 2428 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 1845 2057 . - . ID=g10637.t1.exon6;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 1845 2057 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 1531 1638 . - . ID=g10637.t1.exon7;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 1531 1638 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 1078 1210 . - . ID=g10637.t1.exon8;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 1078 1210 . - 0 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . exon 628 832 . - . ID=g10637.t1.exon9;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . CDS 765 832 . - 2 ID=cds.g10637.t1;Parent=g10637.t1 NODE_2829_length_5040_cov_36.5343 . three_prime_UTR 628 764 . - . ID=g10637.t1.utr3p1;Parent=g10637.t1 #PROT g10637.t1 g10637 DTNWKWVLKNFPNKYSLTFPLNRWEENPTPELECNVTLKGPKQKDWKKKTLTLKTGGLFNTGKKEKERTSVALFNEFDPYFYASDAKNTLKAPTKFSACLRPKARGTTLEDAFYLCFESERDRIQWFTVSRAVKCGRQIKTNMDKARSMLYDAYRPVAEKPVEAPAEPAKPLPLSKTIPKAPPIRAAAAPSEAADHAHTDPPTPTPTPPAVAAPSIPAPTPPSIKVPPTIKPPQLPPTVKPPQVPSVPVPTPAHVAHTASPPVVSAPPVVGAPPKIPPTVAPAAPPAVAAPVAPSVPKPAPPPNLPPRSTPGISAAIPPTIPAALPPKPVAAHTPPHTEPAHAHAHAPTPHAALPPVPMHKPVAPAPAAPVVASDAGDVQHQKPPPIRGLPPTAEAAVPPVVQRAHSQPLLDGSAPPPKPAMAAPTPPKPAMAAPPVPGQSAPRPPGVEKPARPGSVAGPPKPALPQSAPTPTPVGVPPSGQPPKPAKPPIPTAAAPPVPAQQDALAAAAAAAAPPAKKPLPPGASPMMPMFPGGAPPRLKPRAPEASAGGDDAPPPSSADEGQGGFSLMGVQAPVLQQRRQSGSANEEQNYITWLNGKLTGAGFPAVSDLSQSIQSGVVLIETLQVLSSQTPPKYHKKPSFKMHHIDNWNTILKFAESVGIATRELDAEELCNLNKREILKLFTALSQKFP* # PASA_UPDATE: g4343.t1, single gene model update, valid-1, status:[pasa:asmbl_2194,status:12], valid-1 NODE_1628_length_10134_cov_41.9999 . gene 87 3574 . - . ID=g4343;Name=g4343.t1 NODE_1628_length_10134_cov_41.9999 . mRNA 87 3574 . - . ID=g4343.t1;Parent=g4343;Name=g4343.t1 NODE_1628_length_10134_cov_41.9999 . five_prime_UTR 3468 3574 . - . ID=g4343.t1.utr5p1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 3233 3574 . - . ID=g4343.t1.exon1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 3233 3467 . - 0 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 2836 2861 . - . ID=g4343.t1.exon2;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 2836 2861 . - 2 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 2214 2386 . - . ID=g4343.t1.exon3;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 2214 2386 . - 0 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 1592 1663 . - . ID=g4343.t1.exon4;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 1592 1663 . - 1 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 1104 1285 . - . ID=g4343.t1.exon5;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 1104 1285 . - 1 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 511 629 . - . ID=g4343.t1.exon6;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 511 629 . - 2 ID=cds.g4343.t1;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . exon 87 195 . - . ID=g4343.t1.exon7;Parent=g4343.t1 NODE_1628_length_10134_cov_41.9999 . CDS 87 195 . - 0 ID=cds.g4343.t1;Parent=g4343.t1;3_prime_partial=true #PROT g4343.t1 g4343 MTSHKAVQRLVLCCIFAFSIAAVAEDAPAPSRSFVINGPQFVKDGSPFRIIGGSIHYFRSMPQRWPTLLAKLKACGMNTVQFVIPWNVHEIQRGVFDFKGRADVVHFIKLAQHMDLNVVIRPGPYICAEHDFGGFPWWLLSDPSIKSIRDSDPNFLAAVGAWWDVLLPMLKPLLYSNGGPILMAQVENEYGSYGSDKTYLTYLRDSLRKHFGDDVILHSTDGPSDSMLSGSEIDGVYQTVDFGPGSDPPSMFAEQRKYTAGPLMNSEYYPGWLTHWTEKAFPNIDGTYDATWLDKILAYNASVNL # ORIGINAL: g4344.t1 original gene structure, not modified by PASA NODE_1628_length_10134_cov_41.9999 AUGUSTUS gene 4119 4854 . - . ID=g4344;Name=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS mRNA 4119 4854 . - . ID=g4344.t1;Parent=g4344;Name=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS exon 4695 4854 . - . ID=g4344.t1.exon1;Parent=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS CDS 4695 4854 . - 0 ID=cds.g4344.t1;Parent=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS exon 4414 4474 . - . ID=g4344.t1.exon2;Parent=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS CDS 4414 4474 . - 2 ID=cds.g4344.t1;Parent=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS exon 4119 4317 . - . ID=g4344.t1.exon3;Parent=g4344.t1 NODE_1628_length_10134_cov_41.9999 AUGUSTUS CDS 4119 4317 . - 1 ID=cds.g4344.t1;Parent=g4344.t1 #PROT g4344.t1 g4344 MWCVYLSNFQEAWTPSCDVSEAENEIKIVASLPGVKKEDISVDLDEEGRFLTIAGKTEATTEKKGAHYHFVERSYGDFHRSFQLPMNVDTSKVQAKYENGVLDIAIPKVEVKSNLKKIPVIGESHQSANSEKIEPKTAK* # PASA_UPDATE: g4345.t1, single gene model update, valid-1, status:[pasa:asmbl_2192,status:12],[pasa:asmbl_2193,status:12], valid-1 NODE_1628_length_10134_cov_41.9999 . gene 6063 9955 . + . ID=g4345;Name=g4345.t1 NODE_1628_length_10134_cov_41.9999 . mRNA 6063 9955 . + . ID=g4345.t1;Parent=g4345;Name=g4345.t1 NODE_1628_length_10134_cov_41.9999 . five_prime_UTR 6063 6199 . + . ID=g4345.t1.utr5p1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 6063 6451 . + . ID=g4345.t1.exon1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 6200 6451 . + 0 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 6693 7130 . + . ID=g4345.t1.exon2;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 6693 7130 . + 0 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 7350 7963 . + . ID=g4345.t1.exon3;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 7350 7963 . + 0 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 8257 8633 . + . ID=g4345.t1.exon4;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 8257 8633 . + 1 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 8943 9229 . + . ID=g4345.t1.exon5;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 8943 9229 . + 2 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 9526 9659 . + . ID=g4345.t1.exon6;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 9526 9659 . + 0 ID=cds.g4345.t1;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . exon 9835 9955 . + . ID=g4345.t1.exon7;Parent=g4345.t1 NODE_1628_length_10134_cov_41.9999 . CDS 9835 9955 . + 1 ID=cds.g4345.t1;Parent=g4345.t1 #PROT g4345.t1 g4345 MSRVATVAVAFVALCALALATPAASSAADSANVNSVVKLGVEDPPAHYQRYRRELYPSNRAFFQWWYFWIRDEQTDTHWAFDYQAAVCGTGDTKDGPCAGDTADSAVIMFSSVDASKGNLVKYERYPMDRFASAAPSSASNSVDASNPFFVRIATDDDANTNETTFSIEAISDSEYRVRGHMRPSAVANVWHCDGCGGDSALEISWDLVIRRVRGWYGQDNIEIPDRIVGIIQWNTYAHLSVVDGTITVAGRDPIVLSSQGKRFRAYADMNWGVEFPHPPASAPASKAIGYAWGWYYAGKASENPSDDISVIAGTGLTYEGITFGSMEGCFADIRLGDTIGVNVHATRVTVWEGSVLEKSVGFASDGSSVVGVLPAKLLRFEVDRSNWTDVTDAHGSASIPLRQIVTIESEAHLITMDFTSELRSYNRLLFPRQGYVFSDFEALGATAAVRIVDKTSGNTLAEFTTNAGGLEYGYNIPTAIAHADDTSDGAITVDADANTVIGSSAKATKPTAIVLGGGIGGLTAAHELIERGFDVTVYERLDQFGGKARSFGAVGTGKDGRKDLPAEHGFRIFAGEYGATRNTMSRIPLDDTSSREGGRTVWDSVKAAPKTVVDHMTEGTEAFFASANNGTTFSIPSGFPKSIKDAEKTIKYIKEMSTYLTEDEIAEFGSRLWVILTSSMERRFHEFENVSWWDFMRTENYSAHYGDIVKMISGNILAADPRRGSAHVVGHLVSVRHVT* # PASA_UPDATE: g13179.t1, single gene model update, valid-1, status:[pasa:asmbl_929,status:12], valid-1 NODE_1242_length_12783_cov_39.6634 . gene 6276 9246 . - . ID=g13179;Name=g13179.t1 NODE_1242_length_12783_cov_39.6634 . mRNA 6276 9246 . - . ID=g13179.t1;Parent=g13179;Name=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 9135 9246 . - . ID=g13179.t1.exon1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 9135 9246 . - 0 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 8929 8991 . - . ID=g13179.t1.exon2;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 8929 8991 . - 2 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 8611 8783 . - . ID=g13179.t1.exon3;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 8611 8783 . - 2 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 8236 8305 . - . ID=g13179.t1.exon4;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 8236 8305 . - 0 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 7632 7741 . - . ID=g13179.t1.exon5;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 7632 7741 . - 2 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 7414 7481 . - . ID=g13179.t1.exon6;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 7414 7481 . - 0 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 7086 7163 . - . ID=g13179.t1.exon7;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 7086 7163 . - 1 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 6752 6825 . - . ID=g13179.t1.exon8;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 6752 6825 . - 1 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . exon 6276 6595 . - . ID=g13179.t1.exon9;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . CDS 6495 6595 . - 2 ID=cds.g13179.t1;Parent=g13179.t1 NODE_1242_length_12783_cov_39.6634 . three_prime_UTR 6276 6494 . - . ID=g13179.t1.utr3p1;Parent=g13179.t1 #PROT g13179.t1 g13179 MRREYLYRKALEDREKQIHERKRRIKNAMDSGKPIPSDLKHEEASLRAEMEFEDDQTAQVKSHIDDEYSKAGIRDPKVMITTSRDPSSRLRQFAKELRLLFPNSQRMNRGAHIVKELVEACKANDVTDLIIVHEHRGEPDGLIISHMPYGPTAFFALSNVVMRHDVRELAAKTVSEVYPHLIFNNFSTKLGERVRSILKYLFPVPKDESQRLLTFSNESDYISFRHHNFKKKTPSDIEIEEMGPRFEMKVYQIRLGTVDQDEADTEWVLKPYMNTAKKREQL* # ORIGINAL: g13178.t1 original gene structure, not modified by PASA NODE_1242_length_12783_cov_39.6634 AUGUSTUS gene 2485 4774 . + . ID=g13178;Name=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS mRNA 2485 4774 . + . ID=g13178.t1;Parent=g13178;Name=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 2485 2535 . + . ID=g13178.t1.exon1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 2485 2535 . + 0 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 2679 2754 . + . ID=g13178.t1.exon2;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 2679 2754 . + 0 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 3145 3228 . + . ID=g13178.t1.exon3;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 3145 3228 . + 2 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 3401 3521 . + . ID=g13178.t1.exon4;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 3401 3521 . + 2 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 3794 3948 . + . ID=g13178.t1.exon5;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 3794 3948 . + 1 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 4081 4241 . + . ID=g13178.t1.exon6;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 4081 4241 . + 2 ID=cds.g13178.t1;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 4619 4774 . + . ID=g13178.t1.exon7;Parent=g13178.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 4619 4774 . + 0 ID=cds.g13178.t1;Parent=g13178.t1 #PROT g13178.t1 g13178 MATGRVLSIQSHVVSGYAAVFPLQLLGYDVDAINSVQFSNHTGYIGSPSFLEVVLRVVKLLREANPNLLFVCDPVLGDQGKLYVPPELVPIYRDQVVPLANVLTPNQFEAELLTGITIKTEDDAFAAIDALHARGVRTVVITSSDIGGDTSHSITVLGSQMSESTSKPQRLRVHVPRLPMNFTGSGDLFSALLLAWTNKYPTDLKTALGKVVATMRGVLHRTHDHFTQVSPSMESDKTTARLRELRLVDSKRDIEDPPTSDIVVDSF* # ORIGINAL: g13180.t1 original gene structure, not modified by PASA NODE_1242_length_12783_cov_39.6634 AUGUSTUS gene 10245 12650 . + . ID=g13180;Name=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS mRNA 10245 12650 . + . ID=g13180.t1;Parent=g13180;Name=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 10245 10282 . + . ID=g13180.t1.exon1;Parent=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 10245 10282 . + 0 ID=cds.g13180.t1;Parent=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 10387 12532 . + . ID=g13180.t1.exon2;Parent=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 10387 12532 . + 1 ID=cds.g13180.t1;Parent=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS exon 12639 12650 . + . ID=g13180.t1.exon3;Parent=g13180.t1 NODE_1242_length_12783_cov_39.6634 AUGUSTUS CDS 12639 12650 . + 0 ID=cds.g13180.t1;Parent=g13180.t1 #PROT g13180.t1 g13180 MSHGVRRTSPTRRFPDRPQPYPTPDKFGPRAYGGGHPYEGNGHPPASTAWGASSSPGGGGPSDSNGPGGFRGPPSEGWGRDRRPPPVFGGPPGPHHDAWQVDRRHYQRDAFEHDRYGRLPPRSPGGSRGAPLPPLNRRPWGPAPNGTHADHDRPPPSPMAAQQGHHRQLQLQQQQQQQQQQPSSHEIPATQKGTGDESGRRSPQPPSGELGQQPMDWSPLQEGNGPTPVSGHAGAVAVAPTGDARDSRGVAQSGLPPSGETADADRRPPHERRRHTVEGSSLPHNPYHPPPPPAAHAHAHTAYHADGTAGAVAAGTVGTPGGRGGDDMRGLAPLSSQFRGDAMDRRPPMPPHGTPHPRDRWGADWDRRDDRHGRDGRDYGPPPPFMGRDYRDDPDRRRPWDRNGPPGGPPFMMPPREYAPDYERSRGPYSREGRASPPPPLQLNPPPGGLQQQHPYGHSAPASAPLSTGSGPPTPLPRDDRQPPMQAGPRPLDSASGPPLSASSTASSAPSPAFALKPPPHALHPSETGVSIGLSVPATPLLEVPPDAPPHSASRGGVAAFGGGGRDGGSGSGGPSPSPLGGRGVFFGERERERERDRDRERERLGDFPVAPRDRLDPRDMRDMRDPRDRDGRPLYMGPPPPLAWRGGPPPPGLIPPGIMHHGGVPPPDFRDMEMRGRDRGGVLDRPGGVFVGPTGMERRMSDIMLFSEDHLKKHAGLLSLFPDGEERRLL* # ORIGINAL: g612.t1 original gene structure, not modified by PASA NODE_450_length_23499_cov_47.7581 AUGUSTUS gene 18362 21022 . + . ID=g612;Name=g612.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS mRNA 18362 21022 . + . ID=g612.t1;Parent=g612;Name=g612.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS exon 18362 18370 . + . ID=g612.t1.exon1;Parent=g612.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS CDS 18362 18370 . + 0 ID=cds.g612.t1;Parent=g612.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS exon 18557 21022 . + . ID=g612.t1.exon2;Parent=g612.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS CDS 18557 21022 . + 0 ID=cds.g612.t1;Parent=g612.t1 #PROT g612.t1 g612 MVAADFQEVVRVNGRKASVAFEDHRKEFVFDDCFGPDVTQGSVYERVGRPIVDNVMRGINGTIFVYGQTGTGKTHTMGLLRRLPTDPALFDGGASTPSVDREQGSTGIVARALWDIFERIGNASEDEHPGVEWEVTLTFVQLYCESLQNLLDPSVSNLAIREDPRTGFYVEGLTERLVSSYKEAAEFVNAGLENRMIGGTMLNTTSSRSHVILTATVSQFVPIYSASTGETFTRTFRGKLALVDLAGCERVSHSRSEGMRLDEAKAINKSLTLLGNVIASLADRRSPHVSYRSSKLTTLLQDSLGGNAMTSLVATVSTGLQSRRETVSAFLFAQRCMAVRTRAIINDETDREGDVRAAELEQRLAMLERDYQQRESQLVAQHEATVRQLTESLHMLEATPRGVKPEPIPQTTPAPAPVSSLPVMTYCYRLLMDIYARTRVPIQDSKVRATERANEATQRASSRIVVGADGEPLSAVDVDLMAGAVAMVEENYPSMLGPNNKGGLDGGGGPVAIDFPKIDEIDGEEQLLSWLRKVHASVAGNLVFCSRMLEHTDEMTARMREDLVRHEVAAARREVELENWGTTLKDLLNTNAALLARITRLQHEQSGKGGADTVSIGGGSVELPSSASGMLRVMSRQRSTSASSSSLGLLVAGSGNGASSNGGSGVHTQSSPVMAPSPVPLHEGEGAVSGGLAMPLPIMATADGSGVSANGVHPKDNLSATYAIADFAPPSARNGDPAGPTAGIVHEEAPESSAERSSGRRVKAKAESAEVKSKVLLPEAISIGESIAEGDEVGTDHVTPVPPSGRPPNARFKRGDRLARGVSQ* # PASA_UPDATE: g610.t1, single gene model update, valid-1, status:[pasa:asmbl_7398,status:3], valid-1 NODE_450_length_23499_cov_47.7581 . gene 6922 15479 . - . ID=g610;Name=g610.t1 NODE_450_length_23499_cov_47.7581 . mRNA 6922 15479 . - . ID=g610.t1;Parent=g610;Name=g610.t1 NODE_450_length_23499_cov_47.7581 . five_prime_UTR 15388 15479 . - . ID=g610.t1.utr5p1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 15115 15479 . - . ID=g610.t1.exon1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 15115 15387 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 14831 14995 . - . ID=g610.t1.exon2;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 14831 14995 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 14547 14631 . - . ID=g610.t1.exon3;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 14547 14631 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 14181 14248 . - . ID=g610.t1.exon4;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 14181 14248 . - 2 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 13787 13933 . - . ID=g610.t1.exon5;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 13787 13933 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 13492 13570 . - . ID=g610.t1.exon6;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 13492 13570 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 13190 13320 . - . ID=g610.t1.exon7;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 13190 13320 . - 2 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 12787 12933 . - . ID=g610.t1.exon8;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 12787 12933 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 12436 12521 . - . ID=g610.t1.exon9;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 12436 12521 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 12113 12224 . - . ID=g610.t1.exon10;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 12113 12224 . - 1 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 11733 11866 . - . ID=g610.t1.exon11;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 11733 11866 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 11169 11266 . - . ID=g610.t1.exon12;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 11169 11266 . - 1 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 10756 10882 . - . ID=g610.t1.exon13;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 10756 10882 . - 2 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 10324 10434 . - . ID=g610.t1.exon14;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 10324 10434 . - 1 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 9998 10106 . - . ID=g610.t1.exon15;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 9998 10106 . - 1 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 9344 9484 . - . ID=g610.t1.exon16;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 9344 9484 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 8853 9017 . - . ID=g610.t1.exon17;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 8853 9017 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 8437 8532 . - . ID=g610.t1.exon18;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 8437 8532 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 8001 8122 . - . ID=g610.t1.exon19;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 8001 8122 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 7704 7863 . - . ID=g610.t1.exon20;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 7704 7863 . - 1 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 7405 7513 . - . ID=g610.t1.exon21;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 7405 7513 . - 0 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . exon 6922 7125 . - . ID=g610.t1.exon22;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . CDS 7010 7125 . - 2 ID=cds.g610.t1;Parent=g610.t1 NODE_450_length_23499_cov_47.7581 . three_prime_UTR 6922 7009 . - . ID=g610.t1.utr3p1;Parent=g610.t1 #PROT g610.t1 g610 MLGARALRGALAATRPWTPVPSVARRTASTSSLPNLVKGNGIVGVRSEDKNRWERRAPISPTDVASLVASGLKVIVQPSNLRIFPDVEYERAGAQISKDLTSASLILGVKEVPVKELLPNRSYMFFSHTHKAQPYNMHMLDAIVEKNIRLVDYELMVDAKGERVVKFGTFAGLAGMIDFLHGMGDRMLWMGYNTPFVNVSFAHMYPSLAVAKESIRAAGKKIKDVGLPKDLSPLVFAFTGNGAVSKGAQEIFRELPHEFVKASDLPDVAVNGSRNTIYGCVVEAQDYVVPIDSKTAFSRADFFGHPEKYRSEFHTKIAPHVSGIVNGIYWESKYPRLLTCDQMAELAAHGRPKLLGVADISADPNGSIQFMSKCTTIDHPFFVYNPKTGRTHSGTHGEGVVVLAVDNLPAELPREASEFFGNLLAPHVKPLALSDGSKPFGQQTDLGPILQGAVIASNGALTPKYAYIAALRTARRKEEKHVLVLGSGLVAGPLVDRLLKTERNRVTIASISAEEARGLARGRDRVSVAPLDVHDEKSLGALVGKHDLVVSFVPASFHMVALRACVAHKKHMVTASYISPEMRAADQSALDAGITVLNEIGLDPGIDHLSAMKIIDEVHAHGGKITSFVSWCGGLPAPEVSDNPLGYKFSWSPRGVLNAGLNGAVYRHDGEMKSVAPGSLFTAAQTVDIYPGFNLEGLPNRDSLSYAAPYKIPDVPTMFRGTLRYKGFSRIMQGFAELGLFDTKESAFLAQSGGNLTWRQVLLSLLPPGTTDVETAALAKMKASKSSDDGQKLLHAIRWFGLASEAKAPKASTYIDTLCGTLQSKLAYGTGERDLVLLHHSIGVEWPKTGKKELLTSTLVSYGDPEGYSAMSRTVGIPAAIAADLILAGTITRRGVLAPITKDIYEPILSELEKENIVCVERTVQA* # PASA_UPDATE: g608.t1_g609.t1, single gene model update, valid-1, status:[pasa:asmbl_7397,status:3], valid-1 NODE_450_length_23499_cov_47.7581 . gene 169 6236 . + . ID=g608_g609;Name=MERGED%3A%20g608.t1 NODE_450_length_23499_cov_47.7581 . mRNA 169 6236 . + . ID=g608.t1_g609.t1;Parent=g608_g609;Name=MERGED%3A%20g608.t1 NODE_450_length_23499_cov_47.7581 . five_prime_UTR 169 236 . + . ID=g608.t1_g609.t1.utr5p1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 169 377 . + . ID=g608.t1_g609.t1.exon1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 237 377 . + 0 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 576 723 . + . ID=g608.t1_g609.t1.exon2;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 576 723 . + 0 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 973 1085 . + . ID=g608.t1_g609.t1.exon3;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 973 1085 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 1234 1384 . + . ID=g608.t1_g609.t1.exon4;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 1234 1384 . + 0 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 1754 1946 . + . ID=g608.t1_g609.t1.exon5;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 1754 1946 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 2197 2334 . + . ID=g608.t1_g609.t1.exon6;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 2197 2334 . + 1 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 2562 2653 . + . ID=g608.t1_g609.t1.exon7;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 2562 2653 . + 1 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 2820 2892 . + . ID=g608.t1_g609.t1.exon8;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 2820 2892 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 3128 3294 . + . ID=g608.t1_g609.t1.exon9;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 3128 3294 . + 1 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 3616 3654 . + . ID=g608.t1_g609.t1.exon10;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 3616 3654 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 3934 4036 . + . ID=g608.t1_g609.t1.exon11;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 3934 4036 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 4322 4522 . + . ID=g608.t1_g609.t1.exon12;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 4322 4522 . + 1 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 4789 4925 . + . ID=g608.t1_g609.t1.exon13;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 4789 4925 . + 1 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 5308 5454 . + . ID=g608.t1_g609.t1.exon14;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 5308 5454 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . exon 5850 6236 . + . ID=g608.t1_g609.t1.exon15;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . CDS 5850 5950 . + 2 ID=cds.g608.t1_g609.t1;Parent=g608.t1_g609.t1 NODE_450_length_23499_cov_47.7581 . three_prime_UTR 5951 6236 . + . ID=g608.t1_g609.t1.utr3p1;Parent=g608.t1_g609.t1 #PROT g608.t1_g609.t1 g608_g609 MDGKGKHWETDLTKALEPKIAKSGNAARAPVTVIDAFNATCAKYGDQPALHVERSGKWINWTWKGYQQDALKCAKSFLKLGLEPRRAVGLLGFNSPEWLIANMGAIYADGVPFGIYTTNAADACHFVLHHARAQICVVENVAQLTKIMEIKDQLPELKAVIQYTEKVPENAPSYVHSWENFLKLGDATTDADVQARWKQILPGHCATIIYTSGTTGNPKAVMLSHDAMTWTASIVAGKFGVCNEDHIISFLPLSHIAAQMVDIHAPMNYGTRVYFAKPDALKGSLSQTLRDVRPTLFLGVPRVWEKIAEKMQMVASNNSGFKKTIASWAKKKGLKGNMAVQEGKSKPHGWWLANKLVFSKVKDALGLDRCRMAFSGAAPIQMATLMYFLSLNIPIYELYGMSESTALCTISNMGEYRTGTCGKHMEGTDLKIDNPDNDGNGEIMIRGRNLMMGYMEDAESTAKEFDPEGFLRSGDIGKIDSEGYLSITGRIKELIITAGGENVPPLVIEATIKEELALVSNVMVIGDKRRYLICLMTLRSEVDEEGYPTSKLSEPVLRELDAIGSNAKTVEEAKADPKVIAHIKQGMDRANDRAISNAQKVQKWLILPLDFSVAGNELGPTMKLKRRVVNKKYQTEIENLYAENATD* # PASA_UPDATE: g613.t1, single gene model update, valid-1, status:[pasa:asmbl_7399,status:3], valid-1 NODE_450_length_23499_cov_47.7581 . gene 21170 23297 . - . ID=g613;Name=g613.t1 NODE_450_length_23499_cov_47.7581 . mRNA 21170 23297 . - . ID=g613.t1;Parent=g613;Name=g613.t1 NODE_450_length_23499_cov_47.7581 . five_prime_UTR 23092 23297 . - . ID=g613.t1.utr5p1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . exon 22817 23297 . - . ID=g613.t1.exon1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . CDS 22817 23091 . - 0 ID=cds.g613.t1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . exon 22509 22663 . - . ID=g613.t1.exon2;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . CDS 22509 22663 . - 1 ID=cds.g613.t1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . exon 22105 22200 . - . ID=g613.t1.exon3;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . CDS 22105 22200 . - 2 ID=cds.g613.t1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . exon 21170 21885 . - . ID=g613.t1.exon4;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . CDS 21755 21885 . - 2 ID=cds.g613.t1;Parent=g613.t1 NODE_450_length_23499_cov_47.7581 . three_prime_UTR 21170 21754 . - . ID=g613.t1.utr3p1;Parent=g613.t1 #PROT g613.t1 g613 MSESYDYLFKFLVIGNAGTGKSCLLHQFIENKFKQESSHTIGVEFGSKIVNIGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDVTNRESYNALTNWLTDARTLASPDIVIILVGNKKDLEDEREVTFLEASRFAQENDIMFLETSAYTGENVEETFLKCGRTILAKIEAGVLDPDKMGSGIQYGDSSLKRLVTKKGGDGDKRGGGGGGGGCC* # ORIGINAL: g611.t1 original gene structure, not modified by PASA NODE_450_length_23499_cov_47.7581 AUGUSTUS gene 17441 18128 . - . ID=g611;Name=g611.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS mRNA 17441 18128 . - . ID=g611.t1;Parent=g611;Name=g611.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS exon 17741 18128 . - . ID=g611.t1.exon1;Parent=g611.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS CDS 17741 18128 . - 0 ID=cds.g611.t1;Parent=g611.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS exon 17441 17481 . - . ID=g611.t1.exon2;Parent=g611.t1 NODE_450_length_23499_cov_47.7581 AUGUSTUS CDS 17441 17481 . - 2 ID=cds.g611.t1;Parent=g611.t1 #PROT g611.t1 g611 MHVELAPVCVLAGVANMKWMKMKTISWIPRTGLCAKPGHVVVAAHGFRDNHVKMCGVANGASGPSDWKCVAQCLHSTDRAFVIVNAIGCDVAVVVVVAMPEMVLSVQATNAPAEREIGTAIPVCAASRDPADVSSAARFGGN* # ORIGINAL: g2115.t1 original gene structure, not modified by PASA NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS gene 471 1466 . - . ID=g2115;Name=g2115.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS mRNA 471 1466 . - . ID=g2115.t1;Parent=g2115;Name=g2115.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS exon 471 1466 . - . ID=g2115.t1.exon1;Parent=g2115.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS CDS 471 1466 . - 0 ID=cds.g2115.t1;Parent=g2115.t1 #PROT g2115.t1 g2115 MDLLIEMMLGPDFAQTVPEVDTDSLATLIADLYQQDTNETVLPESAAAECAPYPPNLPPGVTQINGESQFDNGMEEEMTAMRTPEVDDGLQFDNGMEEEMTALRTPEVDDEPQIDNGMEEDMPRSPTGRAKAIVTVGSFSFGPGDAVMIKVDDPDVSEQPAIVSNVKIDRKTGDKLVAVEWLYGPNDAVVERQPLLKINEAFSNRELFRSNHVQTVHVNTVNGPCRVQSIQGFLRSDPFSRQFFTRTSIRTRPNNPAVVCRLGKISCIGCRRIINPDKASNENALLICTKCNRVSHMKCVKRRQILRPVPRYRSKYGSTICCDSEKYYLGI* # ORIGINAL: g2116.t1 original gene structure, not modified by PASA NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS gene 6929 8121 . - . ID=g2116;Name=g2116.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS mRNA 6929 8121 . - . ID=g2116.t1;Parent=g2116;Name=g2116.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS exon 7772 8121 . - . ID=g2116.t1.exon1;Parent=g2116.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS CDS 7772 8121 . - 0 ID=cds.g2116.t1;Parent=g2116.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS exon 6929 7328 . - . ID=g2116.t1.exon2;Parent=g2116.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS CDS 6929 7328 . - 1 ID=cds.g2116.t1;Parent=g2116.t1 #PROT g2116.t1 g2116 MASSPNWLVFLGFCGEQRDIAIRQIIEGLVQRGIPRHLIFFDENSIPLGADIWEAVRYGLQNSFLFVPFISYYLMNKRFGKVDPRDEIVYARDTAGISNGRTIPVFYEIRNRQSVSTFYAAPGANIGQALNALASNLPALVTYTHAYVGLIFTPESLSATNQNQTEQFIVSSMSTDNSVTVFPIFLGYDSNAVRRISAVSPNFQRLSSRRGIVMDVNANQEAITTLRELGHGLYFPRAYQYVDFVSAIQ* # ORIGINAL: g2117.t1 original gene structure, not modified by PASA NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS gene 9037 9987 . + . ID=g2117;Name=g2117.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS mRNA 9037 9987 . + . ID=g2117.t1;Parent=g2117;Name=g2117.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS exon 9037 9987 . + . ID=g2117.t1.exon1;Parent=g2117.t1 NODE_802_length_17554_cov_22.1717_potentialcontaminant AUGUSTUS CDS 9037 9987 . + 0 ID=cds.g2117.t1;Parent=g2117.t1 #PROT g2117.t1 g2117 MWSAIRANNKKVVAAVTIIGGIAKCISSYNDVLHSGEKRLESLSKQYKDFSSAFTEVRRDAVHAGIMRSDGSRTANALLLAKWFDKNCSCRSSPPARPLATNDNIESVGGWLSSLVLPSFRSVSKPTEAEIERRCQQIRIARSLGRTYLTAAQTFTRPMLIGNAEHTFEFVNLHRRIRSIRAELDERVWSEICNVAIICAPLEAVNYKWESRVFSEIPFVSYGHSALINVAAADTPITFVLREFKKEVVSRGSKWNDRDSAFPVRDVREVLHEISTFLDDNSSSSSSPITVVIPQHIGRLRDFYEDVKPEFPTVTS* # PASA_UPDATE: g1800.t1, single gene model update, valid-1, status:[pasa:asmbl_4536,status:3], valid-1 NODE_2549_length_5921_cov_40.6687 . gene 1048 4893 . - . ID=g1800;Name=g1800.t1 NODE_2549_length_5921_cov_40.6687 . mRNA 1048 4893 . - . ID=g1800.t1;Parent=g1800;Name=g1800.t1 NODE_2549_length_5921_cov_40.6687 . five_prime_UTR 4816 4893 . - . ID=g1800.t1.utr5p1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 4540 4893 . - . ID=g1800.t1.exon1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 4540 4815 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 4121 4249 . - . ID=g1800.t1.exon2;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 4121 4249 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 3825 3926 . - . ID=g1800.t1.exon3;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 3825 3926 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 3502 3619 . - . ID=g1800.t1.exon4;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 3502 3619 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 3001 3184 . - . ID=g1800.t1.exon5;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 3001 3184 . - 2 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 2622 2704 . - . ID=g1800.t1.exon6;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 2622 2704 . - 1 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 2277 2386 . - . ID=g1800.t1.exon7;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 2277 2386 . - 2 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 1851 1952 . - . ID=g1800.t1.exon8;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 1851 1952 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 1450 1573 . - . ID=g1800.t1.exon9;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 1450 1573 . - 0 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . exon 1048 1261 . - . ID=g1800.t1.exon10;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . CDS 1155 1261 . - 2 ID=cds.g1800.t1;Parent=g1800.t1 NODE_2549_length_5921_cov_40.6687 . three_prime_UTR 1048 1154 . - . ID=g1800.t1.utr3p1;Parent=g1800.t1 #PROT g1800.t1 g1800 MASQLGLMHHGCTIAKPCVAHISCAVGSFAAGAGRRVINGGFRYKSTVASDKFRQIVAKQLEEIRSAGTYKKERYITTPQNTSIGVQGTQGKVLNFCANNYLGLAGDGEVVNAAKRALDTHGNGLSSVRFICGTQNIHKELEGKIAKFHGREQAILFPSCFDANAGIFEALLTPEDAVISDELNHASIIDGIRLCKARKFKYAHRDLKELEARLVEAKDARVRLIATDGVFSMDGNVAPIKEICDLAEKHEALVFMDECHATGFFGKTGRGTEEHCDAVGRVDMINSTLGKALGGASGGYTTGPAEIVELLRQRARPYLFSNSVPPPVVGSAIKVFDMISASSDLCEKVAQNTRLFRGKMKAAGFRILGDDHPIAPVLIGDAKLATLFADEMLKHGVYVIAFSYPVVARGKDRIRVQLSAAHTTDQVLAAVDAFTSVGRQLGVI* # ORIGINAL: g1799.t1 original gene structure, not modified by PASA NODE_2549_length_5921_cov_40.6687 AUGUSTUS gene 336 698 . + . ID=g1799;Name=g1799.t1 NODE_2549_length_5921_cov_40.6687 AUGUSTUS mRNA 336 698 . + . ID=g1799.t1;Parent=g1799;Name=g1799.t1 NODE_2549_length_5921_cov_40.6687 AUGUSTUS exon 336 514 . + . ID=g1799.t1.exon1;Parent=g1799.t1 NODE_2549_length_5921_cov_40.6687 AUGUSTUS CDS 336 514 . + 0 ID=cds.g1799.t1;Parent=g1799.t1 NODE_2549_length_5921_cov_40.6687 AUGUSTUS exon 671 698 . + . ID=g1799.t1.exon2;Parent=g1799.t1 NODE_2549_length_5921_cov_40.6687 AUGUSTUS CDS 671 698 . + 1 ID=cds.g1799.t1;Parent=g1799.t1 #PROT g1799.t1 g1799 MFRNVITRSVTAARPAIRAQQRRNIHLEDHNERPVFNASNMALLGGFTLLGALGLWEYTREKTFLKSA* # ORIGINAL: g7525.t1 original gene structure, not modified by PASA NODE_3055_length_4434_cov_40.4635 AUGUSTUS gene 98 837 . - . ID=g7525;Name=g7525.t1 NODE_3055_length_4434_cov_40.4635 AUGUSTUS mRNA 98 837 . - . ID=g7525.t1;Parent=g7525;Name=g7525.t1 NODE_3055_length_4434_cov_40.4635 AUGUSTUS exon 734 837 . - . ID=g7525.t1.exon1;Parent=g7525.t1 NODE_3055_length_4434_cov_40.4635 AUGUSTUS CDS 734 837 . - 0 ID=cds.g7525.t1;Parent=g7525.t1 NODE_3055_length_4434_cov_40.4635 AUGUSTUS exon 98 539 . - . ID=g7525.t1.exon2;Parent=g7525.t1 NODE_3055_length_4434_cov_40.4635 AUGUSTUS CDS 98 539 . - 1 ID=cds.g7525.t1;Parent=g7525.t1 #PROT g7525.t1 g7525 MTRDLLPTHIKPRHYALTVTPDLDAFTFSGLVEIRIDVLQATKTIHLHAKEVEVLSASVRLPTGVLERALSISADASKDLVTIALATELEPSHQITLTMDFTGILNDKMAGFYRSGYMLNGVKRHMAVTQFEATDARRAFPCFDEPLLKATFDVTLVVPRDRSALSNMPVIAEREVEGGKKE # PASA_UPDATE: g7526.t1, single gene model update, valid-1, status:[pasa:asmbl_5491,status:12], valid-1 NODE_3055_length_4434_cov_40.4635 . gene 1228 3516 . + . ID=g7526;Name=g7526.t1 NODE_3055_length_4434_cov_40.4635 . mRNA 1228 3516 . + . ID=g7526.t1;Parent=g7526;Name=g7526.t1 NODE_3055_length_4434_cov_40.4635 . five_prime_UTR 1228 1258 . + . ID=g7526.t1.utr5p1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . exon 1228 1374 . + . ID=g7526.t1.exon1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . CDS 1259 1374 . + 0 ID=cds.g7526.t1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . exon 1757 1831 . + . ID=g7526.t1.exon2;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . CDS 1757 1831 . + 1 ID=cds.g7526.t1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . exon 1962 2249 . + . ID=g7526.t1.exon3;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . CDS 1962 2249 . + 1 ID=cds.g7526.t1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . exon 2657 2727 . + . ID=g7526.t1.exon4;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . CDS 2657 2727 . + 1 ID=cds.g7526.t1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . exon 3101 3516 . + . ID=g7526.t1.exon5;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . CDS 3101 3498 . + 2 ID=cds.g7526.t1;Parent=g7526.t1 NODE_3055_length_4434_cov_40.4635 . three_prime_UTR 3499 3516 . + . ID=g7526.t1.utr3p1;Parent=g7526.t1 #PROT g7526.t1 g7526 MGCGHGFRLPKDFSVVVWKGAQLRDETLRAVEGATASSDLKASDTCRLVAFNRSVPSKLQDGPTCGLVALSMAADALTCANGVPTAPQQTQPRPQSHPDVDLLLSLARDKGYSRHGEMFSADRLCSLASAHYGIGGRVLRDVTENVLCDELAAGRLVLMAYDADKNHSPCLMNGHKAHWAIITGMVVLLPNAPQGTCENESRTPAISFVELCQDNKSSMNIHDTDDINTNSSNMSVSTSFSESLCKSGGTPLFVLARQPKSRRVAAWPIDVFLASSRNLVDSGPERPSSGDDAYVVDGSLRDTLAGAAVALDPLL* # PASA_UPDATE: g4875.t1, single gene model update, valid-1, status:[pasa:asmbl_5047,status:12], valid-1 NODE_2800_length_5094_cov_43.8703 . gene 377 4880 . + . ID=g4875;Name=g4875.t1 NODE_2800_length_5094_cov_43.8703 . mRNA 377 4880 . + . ID=g4875.t1;Parent=g4875;Name=g4875.t1 NODE_2800_length_5094_cov_43.8703 . five_prime_UTR 377 587 . + . ID=g4875.t1.utr5p1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . five_prime_UTR 1020 1200 . + . ID=g4875.t1.utr5p2;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 377 587 . + . ID=g4875.t1.exon1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 1020 1303 . + . ID=g4875.t1.exon2;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 1201 1303 . + 0 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 1594 1735 . + . ID=g4875.t1.exon3;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 1594 1735 . + 2 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 1945 2105 . + . ID=g4875.t1.exon4;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 1945 2105 . + 1 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 2611 2991 . + . ID=g4875.t1.exon5;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 2611 2991 . + 2 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 3533 3663 . + . ID=g4875.t1.exon6;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 3533 3663 . + 2 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 4057 4204 . + . ID=g4875.t1.exon7;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 4057 4204 . + 0 ID=cds.g4875.t1;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . exon 4522 4880 . + . ID=g4875.t1.exon8;Parent=g4875.t1 NODE_2800_length_5094_cov_43.8703 . CDS 4522 4880 . + 2 ID=cds.g4875.t1;Parent=g4875.t1 #PROT g4875.t1 g4875 MALSIAMVWSVMLLTAYASVFAETANWDSIPQWQVCNSYDKARIEVRYRDLKGGFPSALGGTTKRHPDVEMPFDPPGGMGGWVNSGPYGENCWGDKPRGCVTCASTETACSYASNDGVIQGMVEKTLSADLKPVYRNNVAAGDLPGKKSIKSNESFWVWYHETAGSNNLQTLTTDPFGTFFIQSSLTLERVKFTSTFRFSSSSFFPVNGLGFQEKGTSNNNNNNFGFTTEIHVSFIYNPENSVFQFSGDDDFWLFLGDRLVIDLGGLHWPTCRRIDLRNSVVIPTGGLTFANGSCPNTPIPREIFTHSLQYGDEQVMHIFHAERHQDNSNFMIETTIQRFGKSKSSSAASSNIMSDMQFVNSSDTIYPGLPFTASVALNFPPSQAGNITCYLSDDFNANITVIKKAANFPDCPSASDLVKTLSLDIASAVKEGRKYTIGGYSFSNGTLTCAIDTVWYSNFFGVSATLDVNIGET* # PASA_UPDATE: g12386.t1, single gene model update, valid-1, status:[pasa:asmbl_3994,status:12],[pasa:asmbl_3995,status:12], valid-1 NODE_2302_length_6802_cov_47.1696 . gene 711 6802 . - . ID=g12386;Name=g12386.t1 NODE_2302_length_6802_cov_47.1696 . mRNA 711 6802 . - . ID=g12386.t1;Parent=g12386;Name=g12386.t1 NODE_2302_length_6802_cov_47.1696 . exon 6759 6802 . - . ID=g12386.t1.exon1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 6759 6802 . - 0 ID=cds.g12386.t1;Parent=g12386.t1;5_prime_partial=true NODE_2302_length_6802_cov_47.1696 . exon 5939 6509 . - . ID=g12386.t1.exon2;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 5939 6509 . - 1 ID=cds.g12386.t1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . exon 5422 5628 . - . ID=g12386.t1.exon3;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 5422 5628 . - 0 ID=cds.g12386.t1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . exon 4828 5150 . - . ID=g12386.t1.exon4;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 4828 5150 . - 0 ID=cds.g12386.t1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . exon 2568 4665 . - . ID=g12386.t1.exon5;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 2568 4665 . - 1 ID=cds.g12386.t1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . exon 711 2276 . - . ID=g12386.t1.exon6;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . CDS 1077 2276 . - 0 ID=cds.g12386.t1;Parent=g12386.t1 NODE_2302_length_6802_cov_47.1696 . three_prime_UTR 711 1076 . - . ID=g12386.t1.utr3p1;Parent=g12386.t1 #PROT g12386.t1 g12386 ITVSIAYTWFQPWYRYTFLAARTSMLWVFAWASICLLVAKLSPSSSDNQASLFFYMTSPMVVVVNLAAMRMRRQKIESTPVDSITNAIDLELRIRYHLDNKNLLFKDPLAPVDKADKAEMARQKQVLLEVNEWYRVAAKRMPRSSLLHLFWSNHHLYVAHSKQLALAELSLAEELGPKFDEAFIIYRRRKMVEDEQSGGKGDVIQFITYQKYFEEAQRNDLRCTVYQLRFWTEVIKTQPDIIRLHKIGDVITESLSIAQTSYVHLVKMNPNSPQTLRMYAGFLMDVAYDARTADALLARATDLEDSGQAQTETRGDSILNADGSTFAQLIADHRSASVTISGDHGMEGIVQDTNASACKLLGYRPRELNGRNISTIIPKPFSVTHDLYIRNYLETGETKYLDRIRLACAVHRTGFIVPIHLGILQSCSPSGGMVFVGYMRPIVTTDHFLCVDLNEGTITGCTVSASTLLGIPAEAFAEQQHGAPSAETLQTLQITRYLPEFQTIVLGGEAAATAHIARVITAGEGVRKYEVIPAFVESFDASIVLLRIKAADMTPSSSYKDVQVIHEDDIVVVTDNSRPQSVSGRRDRPTLTVDTRRRDASGSRTPSPLSSPRSPIPVRASTVRLNDVPFCMPRSASNLVRGAQTIPGSASNLSRGMHRSSSEDLLAAGTRKPKNTKNILPPVMSSASNRSLLGGEGFGASRESSVHISEDIPMHLTPSRVRSGRRASVSFVGDPNVAEVVGAEMCTPAIAAAPPGYMGEDVVYTSIPAKSASEGVRFTDTPQEMAEDGPLESFGEVHNAEKNDDNGMHSGSDAEYAGDVTSPHELCRVRVQAFDNVEPGSNVHPCFNAGMRDRSSDDDRGSVASSSATAATFVHRARSSIMANGGVGLGRLGLVLRATFIVLVVGLIAISVVGTIVYKTDANNLVSEIDDVMLASQRRVESHDIIDSVRLLDLYRRNLSNTFSESELRQRLLSAAVTMDQIHAALYNRFAKMTNGQKSLYTVPSILTTISDNRVKSTRLFNLWDLVNLLNSRAKLLAIAPLSDFRAGKPEFDFIFDNTLIVVSSAFEESMTFYEDEAKNTRDVLESAIHSVFLTGIVYSIVMVALVIFPALAIAERSHTHVIELFFNIPKHLARGLQDSCIQRLQSRSDLEEGVEALEEMAGSKAEKGKEKKKAGKKPARTNRRSGKVVVTARQRVRLLFMNQRMTIVLCLTVLTAAIVYTAITYENQYSFSEKHGHNAAEINWSNRRNYRTRLVLFAARELAICNTTTVCDYFRDVGESALVTAEQINHWLTYSNATIEINDMAAIIPALAKLMFDDACVSPDQPADCASFNGGVMASGLNSALYDFWRRGGAALSDGINATIPKPFAYSQDYLSSLDWQTVERFLRYYLVPAMKEATVTYDTTLADDVDTSTKSQLAGCIVYCVIIGVIYVFVLSRIPGKLDDRTRRAHMILLTVPPDVLNSIDGFEELLRAHSRRS* # ORIGINAL: g5598.t1 original gene structure, not modified by PASA NODE_3132_length_4239_cov_36.9479 AUGUSTUS gene 220 885 . + . ID=g5598;Name=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS mRNA 220 885 . + . ID=g5598.t1;Parent=g5598;Name=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS exon 220 287 . + . ID=g5598.t1.exon1;Parent=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS CDS 220 287 . + 0 ID=cds.g5598.t1;Parent=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS exon 480 536 . + . ID=g5598.t1.exon2;Parent=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS CDS 480 536 . + 1 ID=cds.g5598.t1;Parent=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS exon 750 885 . + . ID=g5598.t1.exon3;Parent=g5598.t1 NODE_3132_length_4239_cov_36.9479 AUGUSTUS CDS 750 885 . + 1 ID=cds.g5598.t1;Parent=g5598.t1 #PROT g5598.t1 g5598 MPETFDEDLVRPILVSKFNMARLYSKIITPDAKAAKDNIAKSLREYEYIVAYVKKHPSVRSEIEEEERICQEMVALLPLKMQHMSI* # PASA_UPDATE: g5599.t1, single gene model update, valid-1, status:[pasa:asmbl_5609,status:12], valid-1 NODE_3132_length_4239_cov_36.9479 . gene 1232 4058 . - . ID=g5599;Name=g5599.t1 NODE_3132_length_4239_cov_36.9479 . mRNA 1232 4058 . - . ID=g5599.t1;Parent=g5599;Name=g5599.t1 NODE_3132_length_4239_cov_36.9479 . five_prime_UTR 4049 4058 . - . ID=g5599.t1.utr5p1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 3929 4058 . - . ID=g5599.t1.exon1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 3929 4048 . - 0 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 3584 3738 . - . ID=g5599.t1.exon2;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 3584 3738 . - 0 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 3263 3365 . - . ID=g5599.t1.exon3;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 3263 3365 . - 1 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 2875 3003 . - . ID=g5599.t1.exon4;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 2875 3003 . - 0 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 2626 2720 . - . ID=g5599.t1.exon5;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 2626 2720 . - 0 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 2263 2435 . - . ID=g5599.t1.exon6;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 2263 2435 . - 1 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 1954 2075 . - . ID=g5599.t1.exon7;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 1954 2075 . - 2 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . exon 1232 1633 . - . ID=g5599.t1.exon8;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . CDS 1472 1633 . - 0 ID=cds.g5599.t1;Parent=g5599.t1 NODE_3132_length_4239_cov_36.9479 . three_prime_UTR 1232 1471 . - . ID=g5599.t1.utr3p1;Parent=g5599.t1 #PROT g5599.t1 g5599 MNMRYAMAAFCALGELFALGLGVLVCTKRQHKVFLAASPQFCLAVILGSMMMYSVVFSLVPVATSQLCTLHIWLGHIAFALAFGALFTKTHRIMAIFNNKKLKHHLRGGTQKFLYTMLSCIVGVFVVYLVVWTAVDRPERIYRITDNNEVAYACKSKSEVWLVVVYGVEAIMLGWGVFLAYKTRLAPSKFRESKCIAFAIWNICLLVAIILPLNYAVDIRNPDTQFMFTSVGIFVTTTGTLLLVFGPKIYAFRLEALNGSQTSDGQQSSSKSTRFSGNVSAEHVDNIEAYSRDNSLDPNASRFNLLQRDHLDLRRETDAADARQAALVARIHALELLLEDNGIDVPAAKAPV* # PASA_UPDATE: g1500.t1, single gene model update, valid-1, status:[pasa:asmbl_8924,status:3], valid-1 NODE_699_length_18882_cov_41.598 . gene 978 4667 . + . ID=g1500;Name=g1500.t1 NODE_699_length_18882_cov_41.598 . mRNA 978 4667 . + . ID=g1500.t1;Parent=g1500;Name=g1500.t1 NODE_699_length_18882_cov_41.598 . five_prime_UTR 978 1072 . + . ID=g1500.t1.utr5p1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 978 1159 . + . ID=g1500.t1.exon1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 1073 1159 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 1323 1442 . + . ID=g1500.t1.exon2;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 1323 1442 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 1734 1817 . + . ID=g1500.t1.exon3;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 1734 1817 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 2041 2112 . + . ID=g1500.t1.exon4;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 2041 2112 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 2508 2606 . + . ID=g1500.t1.exon5;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 2508 2606 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 2869 2950 . + . ID=g1500.t1.exon6;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 2869 2950 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 3249 3355 . + . ID=g1500.t1.exon7;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 3249 3355 . + 2 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . exon 3725 4667 . + . ID=g1500.t1.exon8;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . CDS 3725 4108 . + 0 ID=cds.g1500.t1;Parent=g1500.t1 NODE_699_length_18882_cov_41.598 . three_prime_UTR 4109 4667 . + . ID=g1500.t1.utr3p1;Parent=g1500.t1 #PROT g1500.t1 g1500 MPRIETEIKLDYKDVLIRPKRSTLRSRAEVDLNRKFVFKNSGNTFEGVPIIAANMDTVGTFEMAKSLSKHRVMTAMHKYYSVPEWVAFCTENPDILPYVAVSSGTGADMERLTEILTACSGITSICLDVANGYSEHFVQFVRDVRKAFPKHNIIAGNVVTGEMVEELLLSGADIVKVGIGPGSVCTTRSQSGVGYPQLSAVLECADAAHGLNGHIVADGGCTNPGDVAKAFGAGADFVMLGGMLAGHDETAGDVVERDGRKYKQFYGMSSQVAMEKYAGGVAEYRSSEGKNVEIPYRGAVEATIKSILGGIRSTCTYVGAQQLRELSKRTTFIRVTQQLNNVFS* # PASA_UPDATE: g1505.t1, single gene model update, valid-1, status:[pasa:asmbl_8927,status:12],[pasa:asmbl_8929,status:12], valid-1 NODE_699_length_18882_cov_41.598 . gene 16716 18687 . - . ID=g1505;Name=g1505.t1 NODE_699_length_18882_cov_41.598 . mRNA 16716 18687 . - . ID=g1505.t1;Parent=g1505;Name=g1505.t1 NODE_699_length_18882_cov_41.598 . exon 18601 18687 . - . ID=g1505.t1.exon1;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . CDS 18601 18687 . - 0 ID=cds.g1505.t1;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . exon 17693 18427 . - . ID=g1505.t1.exon2;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . CDS 17693 18427 . - 0 ID=cds.g1505.t1;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . exon 16716 17541 . - . ID=g1505.t1.exon3;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . CDS 16918 17541 . - 0 ID=cds.g1505.t1;Parent=g1505.t1 NODE_699_length_18882_cov_41.598 . three_prime_UTR 16716 16917 . - . ID=g1505.t1.utr3p1;Parent=g1505.t1 #PROT g1505.t1 g1505 MLKGARNSVPPHDPQPDDIATLIYTSGTTGKPKGVMLSHRNLTSNAAGLIQMYNKYYKHDDVSLAFLPWAHAYGQTCELHAGIQIGISIGISGGAEHLLHELKEVHPSILFAVPQLWNRVFTGINNSIANGPALTRTLFKAAMGVAARKNAQLSEGRSVDPLTSLTFSLADKVVLSRVRERFGGELRLSISGGAALSVPVHDFFNDLGITMVEGYGLTETSPILAAQKYGLTRQLQGGLWPLPGVELVVADLDGNLLPVGEEGELCAIGPNIMLGYHNLPDATAEAFRKIGDKSYFRTGDLARIQPDGTVKLTGRVKEQYKLTNGKYVVPVPIEDAITVSRFVHQAFVHGDNQPHNVALIVPDFGALVLWAKENGIAPADASTVEKRRALLADERVSKFLLDECLFHISGVKHYEQPRGFKFLAEEFTVMSGLLTPKLSMKRKVIAEKFKEEIKELYSKPITTKHQQRVDHEHSSSHEHHP* # PASA_UPDATE: g1503.t1, single gene model update, valid-1, status:[pasa:asmbl_8925,status:3], valid-1 NODE_699_length_18882_cov_41.598 . gene 11667 13498 . + . ID=g1503;Name=g1503.t1 NODE_699_length_18882_cov_41.598 . mRNA 11667 13498 . + . ID=g1503.t1;Parent=g1503;Name=g1503.t1 NODE_699_length_18882_cov_41.598 . five_prime_UTR 11667 11733 . + . ID=g1503.t1.utr5p1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . exon 11667 11878 . + . ID=g1503.t1.exon1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . CDS 11734 11878 . + 0 ID=cds.g1503.t1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . exon 12011 12120 . + . ID=g1503.t1.exon2;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . CDS 12011 12120 . + 2 ID=cds.g1503.t1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . exon 12250 12407 . + . ID=g1503.t1.exon3;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . CDS 12250 12407 . + 0 ID=cds.g1503.t1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . exon 12521 12836 . + . ID=g1503.t1.exon4;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . CDS 12521 12836 . + 1 ID=cds.g1503.t1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . exon 13002 13498 . + . ID=g1503.t1.exon5;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . CDS 13002 13331 . + 0 ID=cds.g1503.t1;Parent=g1503.t1 NODE_699_length_18882_cov_41.598 . three_prime_UTR 13332 13498 . + . ID=g1503.t1.utr3p1;Parent=g1503.t1 #PROT g1503.t1 g1503 MPVDESTTFHGYAALTPKATLEPFSYHPRQLGDNDVEVHITHCGICGSDVHGIDSGWGPSIYPFIPGHEIVGHVTKAGKDVKHVQVGDRVGVGAQCGACLKSSCPDCPRGLDNCCPQVLYTYNSSYPDGEPTRGGYQDNVRLQSDYAFKLPENIPSEVVAPLMCAGVTVFAPLKRHGAGPGKRVGVIGIGGLGHLAVQFAHQLGAEVTAISSTKSKVEDAKKLGAERYLVSKDKDDIEKHRRYFDMIICTAFYDGIEWAQFMGLIRPGGTFIVVGIPEENITFNPFDLVANNVNFAGSCIGSRGEITEMLDIAAKSNVRPWTEVIPLDQCNAAIERMRKGDVRFRFVLENKK* # ORIGINAL: g1502.t1 original gene structure, not modified by PASA NODE_699_length_18882_cov_41.598 AUGUSTUS gene 9111 11016 . + . ID=g1502;Name=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS mRNA 9111 11016 . + . ID=g1502.t1;Parent=g1502;Name=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 9111 9274 . + . ID=g1502.t1.exon1;Parent=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 9111 9274 . + 0 ID=cds.g1502.t1;Parent=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 9372 9476 . + . ID=g1502.t1.exon2;Parent=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 9372 9476 . + 1 ID=cds.g1502.t1;Parent=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 9759 11016 . + . ID=g1502.t1.exon3;Parent=g1502.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 9759 11016 . + 1 ID=cds.g1502.t1;Parent=g1502.t1 #PROT g1502.t1 g1502 MAAGVETPYKDIFFAYVPLGWITFGGPQAHLSLLYHYFVIKKKWISEQMYAELLGLGQGLPGPTSTQIAFAVAMCRGGLGGGLFGFLWWSFPGLVIMTLAGLGVNRWLSDESVPAWLVALQDGAASAAVGLVATAAVKLCEGQIKDKLTTVIAFVAMAITVVLHSHNLPWLFPTVMAVSGAITVGRFYYRRRKHPESRAPLEGDSLPSTPDEDEVAMGGEADVRVSMHSLRGHGGASATGNGTHQAVGADSVANNDDEDDEDGDDIIFEDDQAALMLKQNGSRNALSTKKHNHHHTEDGETHRIRINYSIGVGVLFLVSFVVLLVLCIGLRRVVDSKALNVFEAFFRVGSIIFGGGQVVLPMLLDEVVKTGWVTERQFLFGFSFVSALPGPMFNFSAYLGAIAMGVGGALLAWIGLFLPGLILIAGVMPLWHRFRTLDSVQAVFVGVNACACGLIVAAVYLLWNKAVKDDAFNAVLAMAAYLAVGKFDAPAAAAVLGGGLVSVVRHYV* # ORIGINAL: g1501.t1 original gene structure, not modified by PASA NODE_699_length_18882_cov_41.598 AUGUSTUS gene 5198 8533 . - . ID=g1501;Name=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS mRNA 5198 8533 . - . ID=g1501.t1;Parent=g1501;Name=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 7722 8533 . - . ID=g1501.t1.exon1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 7722 8533 . - 0 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 7394 7589 . - . ID=g1501.t1.exon2;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 7394 7589 . - 1 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 6958 7115 . - . ID=g1501.t1.exon3;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 6958 7115 . - 0 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 6560 6788 . - . ID=g1501.t1.exon4;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 6560 6788 . - 1 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 6136 6273 . - . ID=g1501.t1.exon5;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 6136 6273 . - 0 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 5812 5975 . - . ID=g1501.t1.exon6;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 5812 5975 . - 0 ID=cds.g1501.t1;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS exon 5198 5246 . - . ID=g1501.t1.exon7;Parent=g1501.t1 NODE_699_length_18882_cov_41.598 AUGUSTUS CDS 5198 5246 . - 1 ID=cds.g1501.t1;Parent=g1501.t1 #PROT g1501.t1 g1501 MPPPPSNSHAPMTMRQVMVILVMLSVAALAGSQIYMSDAFGMIMAGAQTVGDVDRHSMDHAHMHEHEGTHDHAGHDHSHGAVGTAVGEINEFIAAHSDGHGVGGDHDDPSEAGDHERHGDSIPPNAEGGNVGRYEDGNVEQKSDDGSHVSSIRLPASSTPAAVSSAPLSSASSAAKPSFASTAKASVIGTANPVAIAAILGVALDLAGSRVAGKGGYLHYTPDGGFCAGLGHQYTSLVCALTEAEYLGRTLVVPGKLCMDGRGKRPNKFVSWDTFFDMNVLRAIAPIADVGGIESIYGETSGDGGLALGGSRRTHIDINDPHATRLSLVNSKDYVEGLDPRVASTAFNATSSLVAHPADLIVRNFSRVYDRNGRLHPRTVVYWFEICTSPGSVLRKAFDEHAVLSFKFSSRVLNTADLIVSQMTTDLLLHNASLAIRMMDSGLKHSTHVPFWGLHVRRGDKAADTVRWPHLDEDTQGRQILETITPWISAGSVIYIASDETSPGFFNALKQRYFVYTLFDFPDAIQQTEGLDYLLYAVDMAVLDRAAHKIKTFGKTDGSSRMFLARDPRFGYAPRTVHGKL* # PASA_UPDATE: g1504.t1, single gene model update, valid-1, status:[pasa:asmbl_8926,status:3], valid-1 NODE_699_length_18882_cov_41.598 . gene 13662 16046 . - . ID=g1504;Name=g1504.t1 NODE_699_length_18882_cov_41.598 . mRNA 13662 16046 . - . ID=g1504.t1;Parent=g1504;Name=g1504.t1 NODE_699_length_18882_cov_41.598 . five_prime_UTR 15990 16046 . - . ID=g1504.t1.utr5p1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 15942 16046 . - . ID=g1504.t1.exon1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 15942 15989 . - 0 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 15685 15829 . - . ID=g1504.t1.exon2;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 15685 15829 . - 0 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 15413 15540 . - . ID=g1504.t1.exon3;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 15413 15540 . - 2 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 15127 15236 . - . ID=g1504.t1.exon4;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 15127 15236 . - 0 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 14768 14969 . - . ID=g1504.t1.exon5;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 14768 14969 . - 1 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 14416 14577 . - . ID=g1504.t1.exon6;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 14416 14577 . - 0 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 14134 14272 . - . ID=g1504.t1.exon7;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 14134 14272 . - 0 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . exon 13662 13910 . - . ID=g1504.t1.exon8;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . CDS 13771 13910 . - 2 ID=cds.g1504.t1;Parent=g1504.t1 NODE_699_length_18882_cov_41.598 . three_prime_UTR 13662 13770 . - . ID=g1504.t1.utr3p1;Parent=g1504.t1 #PROT g1504.t1 g1504 MAHLSPEQKAELARIANFISAPGKGILAADESTGTIGKRFQSIALENTEANRRAYRQLLFTAPQGLEDSISGVIMYEETLYQKTDSGKNFVALLKERGILTGIKVDKGVVNLPGCDNETTTQGLDGLSEACAKYKKDGADFAKWRSVLRIGAKQPSELAVQENAHVLARYAAICQMNGLVPIVEPEILMDGDHDLLVAVQATERVLAATYKALNDHHVYLEGTLLKPNMVCPGQDCKIKYTPADIAKATVTVLQRTVPPAVPGVCFLSGGQSEEEATVHLNAINQVKGRKPWSLTFSYGRALQASCIKTWKGQADNIAAAQAVLMHRASSNGLAAKGEYKGGEATPSESLFEANYSY* # PASA_UPDATE: g1499.t1, single gene model update, valid-1, status:[pasa:asmbl_8923,status:12], valid-1 NODE_699_length_18882_cov_41.598 . gene 85 701 . + . ID=g1499;Name=g1499.t1 NODE_699_length_18882_cov_41.598 . mRNA 85 701 . + . ID=g1499.t1;Parent=g1499;Name=g1499.t1 NODE_699_length_18882_cov_41.598 . five_prime_UTR 85 86 . + . ID=g1499.t1.utr5p1;Parent=g1499.t1 NODE_699_length_18882_cov_41.598 . exon 85 205 . + . ID=g1499.t1.exon1;Parent=g1499.t1 NODE_699_length_18882_cov_41.598 . CDS 87 205 . + 0 ID=cds.g1499.t1;Parent=g1499.t1;5_prime_partial=true NODE_699_length_18882_cov_41.598 . exon 442 701 . + . ID=g1499.t1.exon2;Parent=g1499.t1 NODE_699_length_18882_cov_41.598 . CDS 442 541 . + 1 ID=cds.g1499.t1;Parent=g1499.t1 NODE_699_length_18882_cov_41.598 . three_prime_UTR 542 701 . + . ID=g1499.t1.utr3p1;Parent=g1499.t1 #PROT g1499.t1 g1499 SEVASIELAGFQRKGDGSRRGFPFEIKAGDRRIVTFRGSWCLEVLSGEPDLIKLAGWGPSCSEDYHSFNMYG* # ORIGINAL: g4843.t1 original gene structure, not modified by PASA NODE_2412_length_6377_cov_36.5684 AUGUSTUS gene 2915 6245 . - . ID=g4843;Name=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS mRNA 2915 6245 . - . ID=g4843.t1;Parent=g4843;Name=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 6100 6245 . - . ID=g4843.t1.exon1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 6100 6245 . - 0 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 5475 5661 . - . ID=g4843.t1.exon2;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 5475 5661 . - 1 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 4993 5184 . - . ID=g4843.t1.exon3;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 4993 5184 . - 0 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 4358 4683 . - . ID=g4843.t1.exon4;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 4358 4683 . - 0 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 3869 3988 . - . ID=g4843.t1.exon5;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 3869 3988 . - 1 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 3521 3656 . - . ID=g4843.t1.exon6;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 3521 3656 . - 1 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 3220 3281 . - . ID=g4843.t1.exon7;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 3220 3281 . - 0 ID=cds.g4843.t1;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS exon 2915 3062 . - . ID=g4843.t1.exon8;Parent=g4843.t1 NODE_2412_length_6377_cov_36.5684 AUGUSTUS CDS 2915 3062 . - 1 ID=cds.g4843.t1;Parent=g4843.t1 #PROT g4843.t1 g4843 SLEVEGLDLEEIEGELAAVKIQQAVVAQLEGEARAEDVLEAYNAALRGRPDAALAAVAANNIIVLNGERDVFDSKKKIKIATADGLDRKLTGPQRKHITFNKCMLFVHMNQLEQSRQAITEAQAAYPHSDVPALVLASLHLKRKDTTKAIEVLQAHATQRGDAAEGVSLALAQHQLASGNVRGAMSTLAGISKLRNRLGVIAALVQLAERVGDADEAARAFQQGIDHWTKTASDGASLRVMTLLQESGSFHLRHSAHVKAAAAFERILKANPKDSRAVAGIIRAALSKEETDTLENLSAAGRVQRKGKAAEEAKGAEGDKKAQTVGGGEGFKARLKRKKRQGKLPKNYDPNTKPDPERWLPRRERSTFKKTKKQKKDNMKGTQGAAEPVVASKGKGPAAPSSSGSQPAPAPTASTTASAPKPQTQTQQQKKKKKGSKW* # PASA_UPDATE: g4842.t1, single gene model update, valid-1, status:[pasa:asmbl_4255,status:3], valid-1 NODE_2412_length_6377_cov_36.5684 . gene 1024 2583 . + . ID=g4842;Name=g4842.t1 NODE_2412_length_6377_cov_36.5684 . mRNA 1024 2583 . + . ID=g4842.t1;Parent=g4842;Name=g4842.t1 NODE_2412_length_6377_cov_36.5684 . five_prime_UTR 1024 1196 . + . ID=g4842.t1.utr5p1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . exon 1024 1247 . + . ID=g4842.t1.exon1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . CDS 1197 1247 . + 0 ID=cds.g4842.t1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . exon 1442 1508 . + . ID=g4842.t1.exon2;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . CDS 1442 1508 . + 0 ID=cds.g4842.t1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . exon 1779 1932 . + . ID=g4842.t1.exon3;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . CDS 1779 1932 . + 2 ID=cds.g4842.t1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . exon 2247 2583 . + . ID=g4842.t1.exon4;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . CDS 2247 2433 . + 1 ID=cds.g4842.t1;Parent=g4842.t1 NODE_2412_length_6377_cov_36.5684 . three_prime_UTR 2434 2583 . + . ID=g4842.t1.utr3p1;Parent=g4842.t1 #PROT g4842.t1 g4842 MDMNNGTMDMNMGGGMVMTFWWGTDVSILFDGWHPRNTGAYVGSVFGVFFIAVLYEFFLAALERVDKATRGDGSKAEMSPLLKDSEGRPSSLKIRLVRSLLHMVQVFWAYFLMLVFMTYNGGLCISVILGTGFGYLVSGRGQLVSADASYCH* # PASA_UPDATE: g4841.t1, single gene model update, valid-1, status:[pasa:asmbl_4253,status:12], valid-1 NODE_2412_length_6377_cov_36.5684 . gene 75 883 . + . ID=g4841;Name=g4841.t1 NODE_2412_length_6377_cov_36.5684 . mRNA 75 883 . + . ID=g4841.t1;Parent=g4841;Name=g4841.t1 NODE_2412_length_6377_cov_36.5684 . exon 75 219 . + . ID=g4841.t1.exon1;Parent=g4841.t1 NODE_2412_length_6377_cov_36.5684 . CDS 75 219 . + 0 ID=cds.g4841.t1;Parent=g4841.t1;5_prime_partial=true NODE_2412_length_6377_cov_36.5684 . exon 427 548 . + . ID=g4841.t1.exon2;Parent=g4841.t1 NODE_2412_length_6377_cov_36.5684 . CDS 427 548 . + 2 ID=cds.g4841.t1;Parent=g4841.t1 NODE_2412_length_6377_cov_36.5684 . exon 683 883 . + . ID=g4841.t1.exon3;Parent=g4841.t1 NODE_2412_length_6377_cov_36.5684 . CDS 683 709 . + 0 ID=cds.g4841.t1;Parent=g4841.t1 NODE_2412_length_6377_cov_36.5684 . three_prime_UTR 710 883 . + . ID=g4841.t1.utr3p1;Parent=g4841.t1 #PROT g4841.t1 g4841 GIILIGEIGGSAEEDAAAFLEQYNLTRKSPKPVVSFIAGRTAPPGRRMGHAGAIIAGGKGGADAKIAALQAAGVAICDSPAKMGVTMLEVMKKAGLA* # ORIGINAL: g8875.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 2200 4484 . - . ID=g8875;Name=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 2200 4484 . - . ID=g8875.t1;Parent=g8875;Name=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 3796 4484 . - . ID=g8875.t1.exon1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 3796 4484 . - 0 ID=cds.g8875.t1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 3291 3376 . - . ID=g8875.t1.exon2;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 3291 3376 . - 1 ID=cds.g8875.t1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 2880 3148 . - . ID=g8875.t1.exon3;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 2880 3148 . - 2 ID=cds.g8875.t1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 2625 2714 . - . ID=g8875.t1.exon4;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 2625 2714 . - 0 ID=cds.g8875.t1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 2403 2513 . - . ID=g8875.t1.exon5;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 2403 2513 . - 0 ID=cds.g8875.t1;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 2200 2319 . - . ID=g8875.t1.exon6;Parent=g8875.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 2200 2319 . - 0 ID=cds.g8875.t1;Parent=g8875.t1 #PROT g8875.t1 g8875 MLSFVARAASQSAPRLSARVIVAYPNAVTAATRHFASLSGAHTKRRNALPSASASAAVPARHMSDMFTHFVDNLKRGFRKNKEIQENLKKLAEEKRKLEETEAVKTAMKTVGAVAETTQEGAKAGAGKLADMFKTVSDSVSSAVGGTIGEAKVVKDAADTAKAAADKVAESSKIVVENPLVQKVSEGVKAITDELVDEGSARFAPYSKPKTRRRRTIKKAEESYADIPESGETRVVLHKDSMWQSQWKDFKENNPLLQSLFSFKQKVDESDNVLVRATKAFTSRLADTMGTMFAENETAQCLAEIAKVDPKFNKERFVQECELEIIPTVLEAYLNGDVEILNEWLHEPAFNVLASHIKMRNEAGLFVDAKILDIRGVDLALARVMEQGPVLVLMFTAQQTMVVRDKGGRIVEGNPDKIEDVYYTWALCRDQSIYDPANAWRVMEMAVQMTRETI* # PASA_UPDATE: g8899.t1, single gene model update, valid-1, status:[pasa:asmbl_7790,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 75745 79184 . - . ID=g8899;Name=g8899.t1 NODE_4_length_82152_cov_44.3151 . mRNA 75745 79184 . - . ID=g8899.t1;Parent=g8899;Name=g8899.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 79079 79184 . - . ID=g8899.t1.utr5p1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 78844 79184 . - . ID=g8899.t1.exon1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 78844 79078 . - 0 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 78602 78678 . - . ID=g8899.t1.exon2;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 78602 78678 . - 2 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 78320 78466 . - . ID=g8899.t1.exon3;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 78320 78466 . - 0 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 77850 78004 . - . ID=g8899.t1.exon4;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 77850 78004 . - 0 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 77368 77500 . - . ID=g8899.t1.exon5;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 77368 77500 . - 1 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 76832 76969 . - . ID=g8899.t1.exon6;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 76832 76969 . - 0 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 76547 76628 . - . ID=g8899.t1.exon7;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 76547 76628 . - 0 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 76129 76251 . - . ID=g8899.t1.exon8;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 76129 76251 . - 2 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . exon 75745 75905 . - . ID=g8899.t1.exon9;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . CDS 75871 75905 . - 2 ID=cds.g8899.t1;Parent=g8899.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 75745 75870 . - . ID=g8899.t1.utr3p1;Parent=g8899.t1 #PROT g8899.t1 g8899 MHIFGRAVSARVLLMVGIALAGIALALAGKDYYAVLGVPRDASDRQIRKNYRDLAKKYHPDKNPGDKTADAMFKEIAEAYEVLTDEEKRRIYDQYGEDGLKQQQNGGGGMNPFGSMFGDFFGGGQQQQKRKGPDVHLEIEVTLEDLYLGKSLPVETNRQVLCTKCRGTGARSPDDIVTCNECSGRGVKITTHQVAPGFVQQMQSQCTKCGGKGKIVRGQCPLCKGKKVQKGSDIVTLSIERGMADGEKITFQRQSDQSPDVTPGDLIFSLKTIPHDRFTRKGNNLYVKETITLLEALVGFEHELKHLDGHTVPLKRTRVTQPGFVMAVDDEGMPVHNYASDRGTLFVEFVVVLPGYLTPEQADAARQLFGSPAA* # PASA_UPDATE: g8885.t1, single gene model update, valid-1, status:[pasa:asmbl_7794,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 33376 35393 . + . ID=g8885;Name=g8885.t1 NODE_4_length_82152_cov_44.3151 . mRNA 33376 35393 . + . ID=g8885.t1;Parent=g8885;Name=g8885.t1 NODE_4_length_82152_cov_44.3151 . exon 33376 33425 . + . ID=g8885.t1.exon1;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . CDS 33376 33425 . + 0 ID=cds.g8885.t1;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . exon 33736 33919 . + . ID=g8885.t1.exon2;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . CDS 33736 33919 . + 1 ID=cds.g8885.t1;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . exon 34535 35393 . + . ID=g8885.t1.exon3;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . CDS 34535 35149 . + 0 ID=cds.g8885.t1;Parent=g8885.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 35150 35393 . + . ID=g8885.t1.utr3p1;Parent=g8885.t1 #PROT g8885.t1 g8885 MEDEGSFSDDRSCGRNGDDTKRANHNALERKRRVFQKERLQELRVCVPTIRTDKPSTVEILQKSTEYIEYMKKRHSQQLTKSIEEHAAYLASISGRASSSSSAAEIRPRRPNSESHVTIAHGGMNGVPIFPRPGSAQQRSVSVSGTGPGMVIGNGSQSMSDSRSMSLSMDIAEEVTLFTDFCDTVRRNSMSVDGAHSFLAQPMSGVRHEDGGSDVDIDDDIDVDGASEDAKPTALCRCGKPWGGRYMVMCEKCKTWYHGDCVGVKPRRGASSFRCDGCCKAV* # PASA_UPDATE: g8886.t1, single gene model update, valid-1, status:[pasa:asmbl_7795,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 35660 36852 . + . ID=g8886;Name=g8886.t1 NODE_4_length_82152_cov_44.3151 . mRNA 35660 36852 . + . ID=g8886.t1;Parent=g8886;Name=g8886.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 35660 35688 . + . ID=g8886.t1.utr5p1;Parent=g8886.t1 NODE_4_length_82152_cov_44.3151 . exon 35660 36852 . + . ID=g8886.t1.exon1;Parent=g8886.t1 NODE_4_length_82152_cov_44.3151 . CDS 35689 36624 . + 0 ID=cds.g8886.t1;Parent=g8886.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 36625 36852 . + . ID=g8886.t1.utr3p1;Parent=g8886.t1 #PROT g8886.t1 g8886 MAFRFRRMTVFVRITAFVRRNAYILLAAIAAGFVVALIALPRYQEPCNRPIVENDRIIEWIEKLRKSEPDLASRFCGEVIRYPLSGPVWPHAHTDQILASISDTLEFVRKNKLSMWPSGGVYIGAVRHGGYWDDDDIDLDIYVDTASADEVVKQGQALIDFLGTRATACHFHQCDHCAVHWSIIKCEKKFVSAEGKDSEILMDINLYMRGDDADTIWGPYAGTYKRSVIFPLRPCRMHHLTMECPHDVKGYMGVFNEAEYEDGGLLRTDYMYSWKYPRIDEQIAHNVRLLHACGYSSLMQYLDPAKAEREL* # PASA_UPDATE: g8887.t1, single gene model update, valid-1, status:[pasa:asmbl_7784,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 36892 37667 . - . ID=g8887;Name=g8887.t1 NODE_4_length_82152_cov_44.3151 . mRNA 36892 37667 . - . ID=g8887.t1;Parent=g8887;Name=g8887.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 37630 37667 . - . ID=g8887.t1.utr5p1;Parent=g8887.t1 NODE_4_length_82152_cov_44.3151 . exon 37538 37667 . - . ID=g8887.t1.exon1;Parent=g8887.t1 NODE_4_length_82152_cov_44.3151 . CDS 37538 37629 . - 0 ID=cds.g8887.t1;Parent=g8887.t1 NODE_4_length_82152_cov_44.3151 . exon 36892 37437 . - . ID=g8887.t1.exon2;Parent=g8887.t1 NODE_4_length_82152_cov_44.3151 . CDS 37062 37437 . - 1 ID=cds.g8887.t1;Parent=g8887.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 36892 37061 . - . ID=g8887.t1.utr3p1;Parent=g8887.t1 #PROT g8887.t1 g8887 MVEVDERCSSVDPSEITLHNLNPSTQPQKKIHYVHEESDSGSSIDDDEDDEEERQRTCCAPEQPPPPPEGFWGYLQFGAVKVLAGLDFAGEKLADFFGITSPKYAYILREVEREREEQERALRKKQAKEDAKYAAAEGAGPHYTSSTAESSDLHA* # ORIGINAL: g8895.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 63304 65531 . + . ID=g8895;Name=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 63304 65531 . + . ID=g8895.t1;Parent=g8895;Name=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 63304 63322 . + . ID=g8895.t1.exon1;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 63304 63322 . + 0 ID=cds.g8895.t1;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 63450 63594 . + . ID=g8895.t1.exon2;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 63450 63594 . + 2 ID=cds.g8895.t1;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 63724 64061 . + . ID=g8895.t1.exon3;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 63724 64061 . + 1 ID=cds.g8895.t1;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 64276 64559 . + . ID=g8895.t1.exon4;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 64276 64559 . + 2 ID=cds.g8895.t1;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 64830 65531 . + . ID=g8895.t1.exon5;Parent=g8895.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 64830 65531 . + 0 ID=cds.g8895.t1;Parent=g8895.t1 #PROT g8895.t1 g8895 MAHTTSETNRQAYVTLVTNDNYGYGALVLGHSIRESGTVRKLAVLVTEQVTLLMRRRLSDVWDHVVVVSELNSNDSERLSMLRRPELGVTLTKIYAWRLTDYDKCVFLDADTLVVRNSDALFDLPELSAAPDLGWPDCFNSGVFVFVPSEATFERLLHMAATEGSFDGGDQGLLNQAWSDWATADIRRHMSFLYNMNPNAYYSYLPAFARFGHEAKILHFIGPQKPWNMHRNANGRVIRVPNVSIDHAQMWWEVYDRYFERWSENIAALSDIAGSASQMDPVRLSAQLRALTTGDIPQAEAPSREVKHSPAQSHSIPWGSPFDIANLPPRPPALQRSDDRSIPPPRSHAHAHHHGTRSHEPEPEPEHRKLESIFSPSPSEVVPSEIPLNASGQPISGFALVEHRLNQMMQKGDEEAAATEVARRAKDRVRKIESSISGLLKKVGDLKRNVAIAPNPDVVEDVIGDMENHVRALNEKLVSLTAGVQGSSASSGSRA* # ORIGINAL: g8896.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 66137 67613 . - . ID=g8896;Name=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 66137 67613 . - . ID=g8896.t1;Parent=g8896;Name=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 67453 67613 . - . ID=g8896.t1.exon1;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 67453 67613 . - 0 ID=cds.g8896.t1;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 67271 67329 . - . ID=g8896.t1.exon2;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 67271 67329 . - 1 ID=cds.g8896.t1;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 66724 67055 . - . ID=g8896.t1.exon3;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 66724 67055 . - 2 ID=cds.g8896.t1;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 66419 66634 . - . ID=g8896.t1.exon4;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 66419 66634 . - 0 ID=cds.g8896.t1;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 66137 66241 . - . ID=g8896.t1.exon5;Parent=g8896.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 66137 66241 . - 0 ID=cds.g8896.t1;Parent=g8896.t1 #PROT g8896.t1 g8896 MAPSVHLQERRGDGDAQLSYVVLSLDDNNSVDVNLFGATITSWKAGGIERIFVSKKAVLDNKKAIRGGVPFVFPNFGPWDLGPQHGFARITQWEFSGQSVTDESASASFTLKDSDTTRKQWNRSFLITYELTLRTGTLLSRVTVENTGVEPFDFTTLLHTYFKTPSQVAKARIGGLTGSDYLDKIEGGEKSETNEWVCISGPVDRVYQATASQHLLAYAADSTAGVAIVKDGFEDTVVWNPWVEGAKKLADMDDDEFHDFVCVEVGTVVRRILLAPGGKWTGSQSLRSQL* # PASA_UPDATE: g8884.t1, single gene model update, valid-1, status:[pasa:asmbl_7793,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 29315 32455 . + . ID=g8884;Name=g8884.t1 NODE_4_length_82152_cov_44.3151 . mRNA 29315 32455 . + . ID=g8884.t1;Parent=g8884;Name=g8884.t1 NODE_4_length_82152_cov_44.3151 . exon 29315 32455 . + . ID=g8884.t1.exon1;Parent=g8884.t1 NODE_4_length_82152_cov_44.3151 . CDS 29315 32455 . + 0 ID=cds.g8884.t1;Parent=g8884.t1 #PROT g8884.t1 g8884 MARKGRPPPVPHPPPTEEHIDMQNLGGHAQNTDEAPVVMPTAEHGQDESRTAAPLVAVGHTEASQEEAFARKYAGHVTSITIHGTDALRPDSFATHPVVLTHVMDLVSGEYVKKSAANRPVTCFSERGNAAVDFVLPVMTKPYEMGRGVVPAAKWEEPLIFNEDYLHMLSPNTMLFFEILDFMPMGRPGTGKPIAVGGVVRGAGWKRIAWGFLKPRGVNGSPNTEKRLRLQLYRYPRKSTARPFAAACESRTPEVFSLYRSRQGSSKKLKPYDGTLYVTVRGVPPIPDQEVVGRPLHPNQIEVGRATFEELVAETKLRLAGREAGDNKLTMKLPVSWRRLPGQICRAPNRGLARLETARKGCFAIRYSNDGRLIAAACADDHDFPIRVFDAATGRPIIALNGHRDLVYDLCWSPNDSHLLSASSDGTARVWDVASLAPAAKATLPHPCYVYSAQFVPAGEGSAAVVAIATGGYDGAVRVWRYGGSGGASALMREMHGHASHVNSLVLDPAGIKMFTGDGAGVIRMWVRGAPSSTGEYGQWDMLKVIEDSEIKGDPISSIRLHPNGRKLLVHARDNAVRIMDLRTFSFTQRFSGAVNAMTCIRSVFSACGNFVLAGSEDGNAYMWDCDTGKTVCVYGASDLHFESPVCDVAFHPHDHMAAFCSFSPNAPVVTMTYDSSLPPRDHVPVSVALESFMPNNNNKNTINASSSLRQSAVNALTSTTSRTGRASQPGPSSASTSGKLPPLPRPSSTSARPGHATAETLSLSESSRDIAMAAEGARARARLMRAERLMAAVAAIGARGDASAFGTDSLNITRNSFSGSELNVTGAVQASAMNRTSTGEKERVRALYDFEPRRTDELAFQQGDVIEVVAKESDNWWLGLVSDRRGYFPVNYVELLPLAEDLDRTLSNLIETGTAPGLEATQPLHPVQPAPAPTPKPAPITPTNWDSLLQSMAPRSLITSVRTKEGDLRIIDQSEAAGSVNSFGCLATADTGIGTPDSKDARQERRRRLVMAARQRRQRHSVDVTEGANAISSGSTSRAESVVSA* # PASA_UPDATE: g8891.t1, single gene model update, valid-1, status:[pasa:asmbl_7787,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 45992 49559 . - . ID=g8891;Name=g8891.t1 NODE_4_length_82152_cov_44.3151 . mRNA 45992 49559 . - . ID=g8891.t1;Parent=g8891;Name=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 49541 49559 . - . ID=g8891.t1.exon1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 49541 49559 . - 0 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 49122 49307 . - . ID=g8891.t1.exon2;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 49122 49307 . - 2 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 48852 48956 . - . ID=g8891.t1.exon3;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 48852 48956 . - 2 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 48102 48682 . - . ID=g8891.t1.exon4;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 48102 48682 . - 2 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 47739 47909 . - . ID=g8891.t1.exon5;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 47739 47909 . - 0 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 47035 47611 . - . ID=g8891.t1.exon6;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 47035 47611 . - 0 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 46830 46903 . - . ID=g8891.t1.exon7;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 46830 46903 . - 2 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . exon 45992 46664 . - . ID=g8891.t1.exon8;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . CDS 46269 46664 . - 0 ID=cds.g8891.t1;Parent=g8891.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 45992 46268 . - . ID=g8891.t1.utr3p1;Parent=g8891.t1 #PROT g8891.t1 g8891 MPAPRDDTATALQTLLQLQTTLSANAATEAQRNALARVVSALKHPAFAVILARSAQSTANAQTDEEKNDNVAPLSAAKKSSTAGKRPVSMIQEGDEEPLPAVAVAVATPVAVAPKESPRSAAIRNGTTPADDRSPIVASAAAIASMTQAFTHMSQKIAADSPAPVRAGKEPAHSADAVSKVEATASSASSATAAATVALAAASGDAAQPTQHSQGVELRVIELQKGDGGLGFNIVGGKDHGHRIFVSRIVDGGVASRDGRLKLGDQLIEVNGHALAGLAHEAAAEVLKTSKGLVVVKVVHDAAAWEDFQRQVQEAKKRASASTSSVSSVAQAASNPVAPPVVAAAVPAQSRTVKTFHVKALFSLDKVKDRDCPGHLLPFRAGDVLHVTNAMDDEWWHAKNLDGDKGFIPSRKRVERKDKSKRRSVTFDEKNLGPTEELVNAMASSSSSAPGKKTHFKNSIRMARKSFFFGKKRAGLHLGVSDAVGGSAGDLSGGDKDGVVPTYEIVALREPDGKTARPVIALGHNKDAFYEKLLSDFPESYATYIPHTTRAPRDDEQDGRDYHFVSKDKMEADIKDGKFIEAGLYKDNIYGTSLEAVKVVATTHKHCLLDVSGYAIDALRAGGLPPIVIFLRPPQNIDENDEQAEYKKRAIEGAKKVEIAFAHRVDVRVDTEPFDSAFDAVVEGIKAVAADKVWAPTSEQVP* # PASA_UPDATE: g8890.t1, single gene model update, valid-1, status:[pasa:asmbl_7785,status:12],[pasa:asmbl_7786,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 43901 45811 . - . ID=g8890;Name=g8890.t1 NODE_4_length_82152_cov_44.3151 . mRNA 43901 45811 . - . ID=g8890.t1;Parent=g8890;Name=g8890.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 45605 45811 . - . ID=g8890.t1.utr5p1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 45452 45811 . - . ID=g8890.t1.exon1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 45452 45604 . - 0 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 45200 45262 . - . ID=g8890.t1.exon2;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 45200 45262 . - 0 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 44895 45081 . - . ID=g8890.t1.exon3;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 44895 45081 . - 0 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 44467 44529 . - . ID=g8890.t1.exon4;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 44467 44529 . - 2 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 44182 44302 . - . ID=g8890.t1.exon5;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 44182 44302 . - 2 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . exon 43901 44058 . - . ID=g8890.t1.exon6;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . CDS 43971 44058 . - 1 ID=cds.g8890.t1;Parent=g8890.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 43901 43970 . - . ID=g8890.t1.utr3p1;Parent=g8890.t1 #PROT g8890.t1 g8890 MDSSGQPLVGPMVDYNRIDALPHKKTLAYVNNYVGQTVRFLNRFAEVCEEKLSDCSFRLQRLEIVVNLLDAKLTSIPGLETVTANDYVPEEDGTDAPPPSSAPPPPSDTGASAPAPASSAPPPPPPPGGPSAPPAPSAAAPPPTPAEAAPPPAASGVTVSNDPRYSKFFKLLKVGVPESQIKMKMAAEGLDPSFLDTPDAPAPAGAPAPQESEDEESDGDSEDF* # PASA_UPDATE: g8893.t1, single gene model update, valid-1, status:[pasa:asmbl_7789,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 52947 57267 . - . ID=g8893;Name=g8893.t1 NODE_4_length_82152_cov_44.3151 . mRNA 52947 57267 . - . ID=g8893.t1;Parent=g8893;Name=g8893.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 56737 57267 . - . ID=g8893.t1.utr5p1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 56689 57267 . - . ID=g8893.t1.exon1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 56689 56736 . - 0 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 56049 56468 . - . ID=g8893.t1.exon2;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 56049 56468 . - 0 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 55075 55785 . - . ID=g8893.t1.exon3;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 55075 55785 . - 0 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 54642 54830 . - . ID=g8893.t1.exon4;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 54642 54830 . - 0 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 54331 54502 . - . ID=g8893.t1.exon5;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 54331 54502 . - 0 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . exon 52947 54149 . - . ID=g8893.t1.exon6;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . CDS 53464 54149 . - 2 ID=cds.g8893.t1;Parent=g8893.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 52947 53463 . - . ID=g8893.t1.utr3p1;Parent=g8893.t1 #PROT g8893.t1 g8893 MDWRKASVAIQERPSMQELLTAKKVRNEDDQLAIQGPVIFQMFLHYCVFMLIIFMAERLGLAPEIRFPALVPYFFLSLIATQVSRLIYTRSPLSLLPVYISFVPFLVLVVLSREVHMNVAVLWFCSLMTIKMQCGVQVAQHVMGVTILFVAVYAATVGAMTWFYTDTTGYASFRGIVLEPRIEWDQEFLIMFCLMFLGLCFWSLLRYIKSYALTVASRERRVEQLWNANNDLKKELKKIKEEKEFEEDQQIDLSSPFIKVIELLREIQSKPDTPEDVREKLEFAMKAIASSKSVNEFILSNENSALVDDQTSVWLREMLQAKKDTPEAPAPGGRPGGRMSIYDRRSASMSMQHGFPMVMAGSGSMGSGLSTGARHEPMLLINEDDIESYEIDRWDDFCLRVEPKILQSLESADTWDFDVFTLYERTNARPLFYLGYALFAKYELFREYSIDPQKFQAWLRAIESGYRSTIPYHNSTHAADVLQSMNYMLNRDALQHMLSPMDLFAALVACIIHDFDHPGKNNSYLINTDDSLAICYNDKSILENHHAAAAFQLTKNDETNIFSGVSKQVYREVREKVLALVLATDPAQHFDYLSKFKTKLSADSFDYNSESDRLTFMQIAIKCADISNPAKVRALSVEWTNRIMEEFFQQGEAERARNLPVSAFMDREQTSIPKCQVGFIDFIVKPLYEAVDSFVGFEVAMTNIGSNRDYWSQRLKQEEAETAANGGKRPPNKPLLASSSS* # PASA_UPDATE: g8879.t1, single gene model update, valid-1, status:[pasa:asmbl_7792,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 14488 15586 . + . ID=g8879;Name=g8879.t1 NODE_4_length_82152_cov_44.3151 . mRNA 14488 15586 . + . ID=g8879.t1;Parent=g8879;Name=g8879.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 14488 14549 . + . ID=g8879.t1.utr5p1;Parent=g8879.t1 NODE_4_length_82152_cov_44.3151 . exon 14488 15586 . + . ID=g8879.t1.exon1;Parent=g8879.t1 NODE_4_length_82152_cov_44.3151 . CDS 14550 15488 . + 0 ID=cds.g8879.t1;Parent=g8879.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 15489 15586 . + . ID=g8879.t1.utr3p1;Parent=g8879.t1 #PROT g8879.t1 g8879 MRFAGFFFAAVAVALAIGSSDALLRPANPTTHRSNRGIVGGQVEIPVDSDDVKPLLEAVFVQLNRESNSMMKIVPVTVAKVTRQVVAGLLYRISFSAGLSRACIKDEVLSTTEQCPVLSSSVHDYSAEILVQVWMKENPVKIISITPLDSTVDDDGAPGVPGGKIPVDVQTDASAKRALEFALSTASSNVQATAPGLQLVAKEVRASKQLVNGLVYEFDILAVVRAENSKASGAQERVSAKIHEALGEVRPLNVLAMEHHAVCDSGLEVSDFEGADIVLGHGYRRCVSGKYTGCVSPFEYASVDSCKVSARV* # ORIGINAL: g8882.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 24533 26542 . + . ID=g8882;Name=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 24533 26542 . + . ID=g8882.t1;Parent=g8882;Name=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 24533 24595 . + . ID=g8882.t1.exon1;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 24533 24595 . + 0 ID=cds.g8882.t1;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 24747 25724 . + . ID=g8882.t1.exon2;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 24747 25724 . + 0 ID=cds.g8882.t1;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 25900 26019 . + . ID=g8882.t1.exon3;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 25900 26019 . + 0 ID=cds.g8882.t1;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 26134 26325 . + . ID=g8882.t1.exon4;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 26134 26325 . + 0 ID=cds.g8882.t1;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 26450 26542 . + . ID=g8882.t1.exon5;Parent=g8882.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 26450 26542 . + 0 ID=cds.g8882.t1;Parent=g8882.t1 #PROT g8882.t1 g8882 MKHGGKVNTMLKELESKWGRVMMALTLRIAETSTEAADKASGNVAKLAIAAGHPDWEVLNEEEAVAICTQGDKYLFGFGVPQSYDTAFKRYMAAARYGLAEACNMVACMHERGLGREVDLPAAVHWYTTAAEKHSADALNNLGRLHETGKGVKTDLDLAAEFYMRAGHAGHSDALTNLGYLYEMGLVDGRPDFKMASHWYKNAAMQGYARAENCMGSLYYAGRGVELNYTSAVEWFRRGAAQGHAPSQNNLGICYEEGKGVPRDLSMAKQMYQLAAQQEHGSAMNNLGYMYMLEGNYDDADRWFRLAAAKGSLDALFNIATMYEDGMQPDGPSPRTAHRFFLKAAQEGYTKAQNKVGLLHFHGNGAMQSYGEAAYWFAKSATSGDAEGQYHLGSLYEAGLGVEQSDDEAVHWYSQSHEGGNVSATVRLAEMHAGGIGVARDTDAASRLLAWASRQGNIQARNRLAELQDNREDVAHLKRFV* # ORIGINAL: g8880.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 15814 21640 . - . ID=g8880;Name=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 15814 21640 . - . ID=g8880.t1;Parent=g8880;Name=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 21551 21640 . - . ID=g8880.t1.exon1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 21551 21640 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 21381 21412 . - . ID=g8880.t1.exon2;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 21381 21412 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 21166 21247 . - . ID=g8880.t1.exon3;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 21166 21247 . - 1 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 19623 20972 . - . ID=g8880.t1.exon4;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 19623 20972 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 18363 19343 . - . ID=g8880.t1.exon5;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 18363 19343 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 16300 18177 . - . ID=g8880.t1.exon6;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 16300 18177 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 15814 16101 . - . ID=g8880.t1.exon7;Parent=g8880.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 15814 16101 . - 0 ID=cds.g8880.t1;Parent=g8880.t1 #PROT g8880.t1 g8880 MSSDVPSRDGVDGLSVQQKKAVESAVKTVWGRHGGVADGFRPVQCTNGAKTLSDCLGTIVSEHEGVDKVCSLLANNPNTPGNVVARVSVLLDTLGRAIGLLTAPVVGACLVECSNAIARESTARPSPFSRPVCRGLASVIVNNSKSANASDLRLVLRVLLKALAGAPVSLESVIDSAIEVLCSDDPGSRILHNVAVAAEVVQAWAGAKEAGCGGSVSEYLDSRFARLVSALSASFRCALGCSHVCRALTIVNEGEGSDMWAQLLFPSSAAMELQSPVLDCEWRGNVLRDALSQCQLSQFDWICGIIDRAADPQFDPLRETPTTATLRPALRGIVLSTLVERASDVAARVGDLTANEVPGGPGDSSWAHRFREWNAFSDLAHVLVGKRSVDFEPFFLELVAKISKQCGGQSLALWSLLRCIDHPHVVDALIAAVRSPTTKNGSAGWAPPSALHAALVKTLVGGLVTPLPPATSPGWFFSMSIFCDLLRPGKDVLELVSQWHPPLVRIFTEYQEQYRSCKSVVDLLEKSDSASTPLGLREWHMVGAISRISSTNINAIIIMRLAAGIHSLSNPTSAENGRVVAYLPSPSASGALAVGVDPQWIDQMSGRCRARLAVQYYQEFVKLCKGEGGISAVAAPFVETFARLCRMVPSPFLDFLPSLWAHGAHRLVPALQEALSPVALERSPIPAHILVELLAHRLVLQVRTSPGLPQIVALLADGARRATNKTLSQELLACAMKLSASSFSGVLAAYKGPAAEALIGTLSNEMLVRAVLRSLAVSLRTTGHHGTPLFGLRDIEALLLRIDAAWGWRMRWSDAAIARFPEPLKSFYTSRAARYKAEFETGKIALSDIQQVKNITALFLVGEGPALDIFASQFTVPERQRLLLPSLYVAGRQIVGDRSTQLNIGGVRKALQAIGPGALLALIPSFVDFVVDMVQRDEFDTFPPKRDLLPHAHVLDDLCFRYSIIPLELVMNALLRGVYDGQSLTIASNLIRVLLNPDKPHDAEPSVRTSRRCAEFMNLGLPSELHSTTVKDPPASSHPSVPGSLFKLQAQRAQLASGGVDQRGGDHIRHQPLPVYFGDYALRLLSVLDTFIVQCFEHPVENKNVVAMADLYGTLYRYHDFPVHFVHETLAYYSTRESPPSMGASAARAGLVGLLVHDAVPQTSTMKERNAGAVGLSRTGAHSLFSPEFLAFVISMKSPPSNGANSSPLFEFASQPVYLAAFVLRLVLRLGDPFAGESEECVDGDTRPRVNVDWRFSEFSCPRSRLLIIAATEILALPVNICSTCEALVSIALDGIPSDAIGAALALVQEQRDRKAPGLFATLRLPLHRLRHIRHSDVVHAVGALLSRLPADVVGPIISAKLCEAVVIAGSDGSTDWLHSMCGCGLESSANSETSSLALHPSVTESTTSRFIALAHIYGVYGGFGAIGVLSSALADAVQFVMSYKQASYACHTLVPFISSIRRRQPFIWEESVHSLANALAKVGRNASCHVAETKSGKRSWETAFAPVCDSSEHTALESVLCFAFELLDGATLSPAIHSKMSDALGALEPSTREKFGLIAFDTKVV* # PASA_UPDATE: g8888.t1, single gene model update, valid-1, status:[pasa:asmbl_7777,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 38058 40398 . + . ID=g8888;Name=g8888.t1 NODE_4_length_82152_cov_44.3151 . mRNA 38058 40398 . + . ID=g8888.t1;Parent=g8888;Name=g8888.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 38058 38090 . + . ID=g8888.t1.utr5p1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 38058 38225 . + . ID=g8888.t1.exon1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 38091 38225 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 38308 38370 . + . ID=g8888.t1.exon2;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 38308 38370 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 38507 38651 . + . ID=g8888.t1.exon3;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 38507 38651 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 38771 38881 . + . ID=g8888.t1.exon4;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 38771 38881 . + 2 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 38989 39105 . + . ID=g8888.t1.exon5;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 38989 39105 . + 2 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 39228 39364 . + . ID=g8888.t1.exon6;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 39228 39364 . + 2 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 39541 39603 . + . ID=g8888.t1.exon7;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 39541 39603 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 39689 39727 . + . ID=g8888.t1.exon8;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 39689 39727 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 39842 39947 . + . ID=g8888.t1.exon9;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 39842 39947 . + 0 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 40029 40142 . + . ID=g8888.t1.exon10;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 40029 40142 . + 2 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . exon 40257 40398 . + . ID=g8888.t1.exon11;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . CDS 40257 40351 . + 2 ID=cds.g8888.t1;Parent=g8888.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 40352 40398 . + . ID=g8888.t1.utr3p1;Parent=g8888.t1 #PROT g8888.t1 g8888 MAHEQKENARRSHPDPLHLWKWIESVKADLKPPVGNKMLYGKDCEFKIMIVGGPNTRTDYHVQNGEEFFWQLQGNMVLRINDGGMFKDIAINEGECFMLPPNIPHSPQRTADSIGLVIERERLPHEIDHLRWYCPNCRRILYQESFHCIDLGSELVPVINRYYDNEPLRMCKNCGHVDERNSHIQNGAKQDADPTVPRVNWETHPLPFSLNEWIDKNKGDLKPPVGNKMVFGKHCEFKVMIVGGPNTRTDYHEEVGEEWFYMIKGDMTLKIKEGGKSKDVHIREGESYLLPGNVPHSPQRFPDTIGLVVERERRPHEVDFLRWYCRSCGEATVFEDSFHCTDLGAQLKPVIEKYYGDESLRRCPKCGITDQPPH* # ORIGINAL: g8876.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 5204 8943 . + . ID=g8876;Name=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 5204 8943 . + . ID=g8876.t1;Parent=g8876;Name=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 5204 5590 . + . ID=g8876.t1.exon1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 5204 5590 . + 0 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 5855 6245 . + . ID=g8876.t1.exon2;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 5855 6245 . + 0 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 6337 6434 . + . ID=g8876.t1.exon3;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 6337 6434 . + 2 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 6637 6792 . + . ID=g8876.t1.exon4;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 6637 6792 . + 0 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 7000 7259 . + . ID=g8876.t1.exon5;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 7000 7259 . + 0 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 7593 7734 . + . ID=g8876.t1.exon6;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 7593 7734 . + 1 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 8069 8369 . + . ID=g8876.t1.exon7;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 8069 8369 . + 0 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 8517 8570 . + . ID=g8876.t1.exon8;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 8517 8570 . + 2 ID=cds.g8876.t1;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 8813 8943 . + . ID=g8876.t1.exon9;Parent=g8876.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 8813 8943 . + 2 ID=cds.g8876.t1;Parent=g8876.t1 #PROT g8876.t1 g8876 MLSPSSVRLPFRSWTQRRHFNLYHLLIFLVIALLVINYVAVIYLRTAQCAQINDGGGRGDRKVVSASAPLRDSFAHKVTVVIRDFMFFSHDIVGDVEAITSLFPSIAVVVVSKSVPYPPIKLNEKPNVKFVSLAIYPGSNATHHRAEPLITTPYVLLLPDNVWPAPGVNVASMLDLLRNIERYREREAKMVGQPVENSDIAIHKHVRIVASQVAVRTTAGQSDDETGNPLCHCDELDFDVKRWTLHYSKPLKHSAVSEADCSVIDARVDCSVLECMCRLLYMMHVSTAQMRCMAATCGAVRCSTCLRQAPLLMATGDLFSLEWDAYDKVTSIALFAQAAARGWKVALMHDALFSPGIATLFAHDYHLQWKANRDFGAATKALYARLGIKRIVDVAQTQTGGKDEFFGCTRKTPRCFGTVVNDAPEFIHAGRWTPPCCLRAIRETGRHVMRRLEAAGVRYWLEGGTLLGAVRHGDIIPWDYDMDIGIFEEDVELLHELLAVKKLEKGGTKVFADGFVWENAREGDFYRVQYSAANHLHVDLWPFRERQSDGMMTKDTWMATHRQDMEFPSHFLKPLGKMVCDECGSGIGRGIGAKGREFVGMQVSVPNNVRAFLELKFGPGVIENPRFPGSAEDLQTDWK* # ORIGINAL: g8900.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 79743 82039 . + . ID=g8900;Name=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 79743 82039 . + . ID=g8900.t1;Parent=g8900;Name=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 79743 79850 . + . ID=g8900.t1.exon1;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 79743 79850 . + 0 ID=cds.g8900.t1;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 80033 80608 . + . ID=g8900.t1.exon2;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 80033 80608 . + 0 ID=cds.g8900.t1;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 80868 81110 . + . ID=g8900.t1.exon3;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 80868 81110 . + 0 ID=cds.g8900.t1;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 81461 81577 . + . ID=g8900.t1.exon4;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 81461 81577 . + 0 ID=cds.g8900.t1;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 81830 82039 . + . ID=g8900.t1.exon5;Parent=g8900.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 81830 82039 . + 0 ID=cds.g8900.t1;Parent=g8900.t1 #PROT g8900.t1 g8900 MLVAFLVDTSASMNQTAANGLSYLDIAKATVEHFIKVRAKDPQSRSDRYMLITTESDSPTAVRIGFKEPFNVFMEELKSLRAHDNGSLLVATRLAFDLLNCYRIPSGIDTVGQGRYPYVMEPGVIFAVTDGVDPLGPDSPIPPGTRPTPMHTSAMLKAALPASRPYPGAELCDDPFRWDQRLFVAVLQMSGCGIPPAVLRPPDASIVALCDGTGGRALLASSQRAAMQAAEAVVGRLQQGVLVSFECFDPREKGVAIPGLLPHAYDNVPSPAPLASARKMMQLHSQSGAQKGAFWPIPEAAWTDAKSQSLPSRTAHPLISVAMADADPKYLKAFPFDKYEIEPCPLTQAILSRRKPDACWVAFVHGSARKGLAGHDYGFPFGYVRPRTTAQSALLYVLPYNYAVLLPLIEEIIGPLR* # ORIGINAL: g8894.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 58080 62351 . - . ID=g8894;Name=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 58080 62351 . - . ID=g8894.t1;Parent=g8894;Name=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 62304 62351 . - . ID=g8894.t1.exon1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 62304 62351 . - 0 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 62079 62190 . - . ID=g8894.t1.exon2;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 62079 62190 . - 0 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 61872 61966 . - . ID=g8894.t1.exon3;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 61872 61966 . - 2 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 59602 61724 . - . ID=g8894.t1.exon4;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 59602 61724 . - 0 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 58970 59479 . - . ID=g8894.t1.exon5;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 58970 59479 . - 1 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 58525 58768 . - . ID=g8894.t1.exon6;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 58525 58768 . - 1 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 58302 58418 . - . ID=g8894.t1.exon7;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 58302 58418 . - 0 ID=cds.g8894.t1;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 58080 58175 . - . ID=g8894.t1.exon8;Parent=g8894.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 58080 58175 . - 0 ID=cds.g8894.t1;Parent=g8894.t1 #PROT g8894.t1 g8894 MASETATRRLVDYWFQIGCTVSDGDVDPLTEALQRLCDITNGDIESEDGGRQEANSIQEKVKVGPVSRFPSEDHFDYAFPEALETFCLPCGPFLSEEPPSATCYDLVLTGPSGDRAYVSVMALHEPISSHKKLRGVYGPLCIGFISHWPIFSLMRDVLMIIRGLGLGATNLLPQSTDAVEAAIASFVSRIPVPPPGRTEISFTIAGVRLHHGRPHPPDLPAADFGFAPLFRRLSVENIISLLTAILLERRVVIYSSELSMLTLCTEAVLSLIHPFAWHYVYIPVLPSAYLEDFLDVPSSSIIGAHSSARFLGKLAGDIVVVDLNEGSVTTREPLPAPPSQRLKSLKRNLEGNLVALGRNPEVAVDTDGFDHLPTGDESFPPQNLRHGDGWCRAASNLRGDDRDAHEHLMGFSGLGASQQNDAGFGSQRCLTDTERLRCAFMHYISQFLDVGDYRKFFTGLSDTAAGAKLTPTEKGTFIDENGFEISAGEAASMQEGWSDGAVQIDTKALLNRAPSWARDFLSKFVKTKIFSRFAFERLSESQTERPTMLFDEMSAGRLGKDVLAWDRVTAYLRHVCNDVTACVTIKKQGTSSDPTLASIQLNRQQSAPVLSHDALLKLNGATGARFPKLSFARVTPTQTLPLDLPDQSSCALHVLHSRPRPHKTAGGLLGSVFRKIVPGADRSPRLNRKGTSASAAVTNLPPPASQDGPTTLGKSPSNGSSEGFFGLLSWKTDAPPSASGSPSIVVTNAGGSGRGVAPIPGLPGLRDYRRIDKDLLGEFAADDGHILDMAGLRRAIFYGGVGQDARRDIWMLLLGLIPSDASSETADALIMQRRLAYEKIKGEMEDKAADPEFARVMRRIEKDVRRTDRNHPLFAGDDNASRASMCGVLAAYAVHDTPLGYVQGMSDLLSPLLVVLGDESEAFWGLDCVLRRMRGNFAETEKTMRDFFGRLDCLLEEVDPEFRAYLASVSRMEDAQSGRSSSDARSSDMNSLQFSFRWFLLNFKREFEFDEVLSIWEASLIGPLESLARLFVSCLSTFPSSHFLCIWAREGSNDFQYYVALAIIETYKDVIMIQKMSWNDILQFVNQLALKMDVTRVLERARCIEEYVAFMMSD* # PASA_UPDATE: g8889.t1, single gene model update, valid-1, status:[pasa:asmbl_7778,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 40521 43791 . + . ID=g8889;Name=g8889.t1 NODE_4_length_82152_cov_44.3151 . mRNA 40521 43791 . + . ID=g8889.t1;Parent=g8889;Name=g8889.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 40521 40959 . + . ID=g8889.t1.utr5p1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 40521 40994 . + . ID=g8889.t1.exon1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 40960 40994 . + 0 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 41107 41411 . + . ID=g8889.t1.exon2;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 41107 41411 . + 1 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 41521 41664 . + . ID=g8889.t1.exon3;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 41521 41664 . + 2 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 41775 41869 . + . ID=g8889.t1.exon4;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 41775 41869 . + 2 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 42014 42265 . + . ID=g8889.t1.exon5;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 42014 42265 . + 0 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 42350 42530 . + . ID=g8889.t1.exon6;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 42350 42530 . + 0 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . exon 42656 43791 . + . ID=g8889.t1.exon7;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . CDS 42656 42909 . + 2 ID=cds.g8889.t1;Parent=g8889.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 42910 43791 . + . ID=g8889.t1.utr3p1;Parent=g8889.t1 #PROT g8889.t1 g8889 MAAPAPAGEQQGFTNEEGWKDKLRLPAKDSRPKTEDVTNTKGNEFEDYFLKRELLMGIFEKGYEKPSPIQEESIPISLAGRDILARAKNGTGKTAAYLIPVLEKTDTTRNVIQALILVPTRELALQTSQLCKELGKHMNVRVMVTTGGTSLKDDIMRLQETVHIVVATPGRVVDLAGKGVANLKHCNVIVMDEADKLLSPEFKPIAEQLLSYLPPTRQLLLYSATFPLSVKDFKDRHLNKPYEINLMEELTLKGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVQRVELLAKKITELGYSCFYIHAKMQQADRNRVFHDFRRGACRNLVCSDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITYDDRFNLFKIEQELGTEIKAIPPVIDKSLYVAPDSQ* # PASA_UPDATE: g8877.t1_g8878.t1, single gene model update, valid-1, status:[pasa:asmbl_7782,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 9441 13796 . - . ID=g8877_g8878;Name=MERGED%3A%20g8877.t1 NODE_4_length_82152_cov_44.3151 . mRNA 9441 13796 . - . ID=g8877.t1_g8878.t1;Parent=g8877_g8878;Name=MERGED%3A%20g8877.t1 NODE_4_length_82152_cov_44.3151 . exon 13667 13796 . - . ID=g8877.t1_g8878.t1.exon1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 13667 13796 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 12746 13440 . - . ID=g8877.t1_g8878.t1.exon2;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 12746 13440 . - 2 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 12399 12491 . - . ID=g8877.t1_g8878.t1.exon3;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 12399 12491 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 12008 12163 . - . ID=g8877.t1_g8878.t1.exon4;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 12008 12163 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 11743 11827 . - . ID=g8877.t1_g8878.t1.exon5;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 11743 11827 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 11335 11459 . - . ID=g8877.t1_g8878.t1.exon6;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 11335 11459 . - 2 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 10875 10990 . - . ID=g8877.t1_g8878.t1.exon7;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 10875 10990 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 10568 10713 . - . ID=g8877.t1_g8878.t1.exon8;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 10568 10713 . - 1 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 10215 10344 . - . ID=g8877.t1_g8878.t1.exon9;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 10215 10344 . - 2 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 9922 10087 . - . ID=g8877.t1_g8878.t1.exon10;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 9922 10087 . - 1 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . exon 9441 9537 . - . ID=g8877.t1_g8878.t1.exon11;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . CDS 9481 9537 . - 0 ID=cds.g8877.t1_g8878.t1;Parent=g8877.t1_g8878.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 9441 9480 . - . ID=g8877.t1_g8878.t1.utr3p1;Parent=g8877.t1_g8878.t1 #PROT g8877.t1_g8878.t1 g8877_g8878 MRSSAPMASWMRFSATARRLVPAAAIVVLIVYLVQQSRTPGLEGYKSSRSLVAVLKSVLFYRQHPLHLHLIVDDASERILRVLFATWQVPHMTTSYYKTDDYRSRVATIPTSHYSGVFGLLKLTLEMALADVDRLITLDTDVVFGADIAKLWEHFSRFEPDQILGLVENQSEWYLGKLKSSNPWPAIGVGFNTGVMLMDLSRMRKMKWDRLWLETARAELDSREPGRKTTHLADQDVINAVLKENPRFVYRLPCEWNIQLSDNSLSDVCYRERGSIGVVHWNSPKKTAVANKNIEYFRLFVATFSQYDGGLLRRELLACPRYSTANENTVHDECAEFRKAADIKYRTHLFYADFEEPPLSDNDVTLVAQFSLDRLVMLEPLAELWEGPISLSIYLTDADAGYVSTFIESSSVLSARKNIGYHFVYVEGLFFPVNYLRNVALDEAKTPFVLLVDIDFLPSRNLYQLLRSTITSVGMADGKKAIVVPAFETFKYKFNFPASKADLFKLVDAKEVVTFRANEWPQGHSPTDFERFRTASEPYKIEWAPDFEPYIVVRRDVPRYDTRFVGFGWNKVSHIYGLTKLKYEFVVIPDGFIVHMPHSPSLDIRKFRKNQLYRTCLGKLKREFMEEMSHPK* # PASA_UPDATE: g8892.t1, single gene model update, valid-1, status:[pasa:asmbl_7788,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 49996 52369 . - . ID=g8892;Name=g8892.t1 NODE_4_length_82152_cov_44.3151 . mRNA 49996 52369 . - . ID=g8892.t1;Parent=g8892;Name=g8892.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 52294 52369 . - . ID=g8892.t1.utr5p1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 52093 52369 . - . ID=g8892.t1.exon1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 52093 52293 . - 0 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 51718 51971 . - . ID=g8892.t1.exon2;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 51718 51971 . - 0 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 51253 51419 . - . ID=g8892.t1.exon3;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 51253 51419 . - 1 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 50810 51043 . - . ID=g8892.t1.exon4;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 50810 51043 . - 2 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 50538 50640 . - . ID=g8892.t1.exon5;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 50538 50640 . - 2 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . exon 49996 50396 . - . ID=g8892.t1.exon6;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . CDS 50060 50396 . - 1 ID=cds.g8892.t1;Parent=g8892.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 49996 50059 . - . ID=g8892.t1.utr3p1;Parent=g8892.t1 #PROT g8892.t1 g8892 MAGHSAPVMLLVVALFATYLTSQSAMALPTKEVEGVARALELARVEKLWERVRQEGAKSTPADWADQFRNVTTLVRSRGYECEDHSVVTSDGYILSVQRLTLPKGVVRKGVVFLQHGILDSSMTWVIGSLDPKLRLPFLLVDTGFEVWMGNSRGNTYSRAHTTLDPADDAFWRYTFDDYASKDLPAAFDHVLRVSGETQLHYVGHSEGTLIGFVAFSTFPEVIKSVKTFVALAPVAYVSQAAFTPLLEILPKRLVFDIFGNKSVLSYPMGPLGLVVPTACNLAPWLCETILCMLAGCESKTSTDMSRMGAILSHYPAGTSAMDLDHFYQLSRSSALGGYDFGSSEENFAHYGQPTPPLYDVTGLKVPSALFSGTHDSLADPKDVAQLLTMLPTENVLHYESIEGYGHGDFLWAEDAAAKLYLTVIGILNGR* # PASA_UPDATE: g8898.t1, single gene model update, valid-1, status:[pasa:asmbl_7780,status:12],[pasa:asmbl_7797,status:12],[pasa:asmbl_7798,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 69500 75414 . + . ID=g8898;Name=g8898.t1 NODE_4_length_82152_cov_44.3151 . mRNA 69500 75414 . + . ID=g8898.t1;Parent=g8898;Name=g8898.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 69500 69832 . + . ID=g8898.t1.utr5p1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 69500 71821 . + . ID=g8898.t1.exon1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 69833 71821 . + 0 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 71987 72070 . + . ID=g8898.t1.exon2;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 71987 72070 . + 0 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 72343 72439 . + . ID=g8898.t1.exon3;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 72343 72439 . + 0 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 72711 72851 . + . ID=g8898.t1.exon4;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 72711 72851 . + 2 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 72984 73053 . + . ID=g8898.t1.exon5;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 72984 73053 . + 2 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 73231 73398 . + . ID=g8898.t1.exon6;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 73231 73398 . + 1 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 73679 74003 . + . ID=g8898.t1.exon7;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 73679 74003 . + 1 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 74171 74259 . + . ID=g8898.t1.exon8;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 74171 74259 . + 0 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . exon 74505 75414 . + . ID=g8898.t1.exon9;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . CDS 74505 74607 . + 1 ID=cds.g8898.t1;Parent=g8898.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 74608 75414 . + . ID=g8898.t1.utr3p1;Parent=g8898.t1 #PROT g8898.t1 g8898 MAAMHPAHYGWQGQPFGAPVVDPALRSGRMPAQPPMGPPHPSQMPWNQQQQQLQQQHQQQHQQQQQNRPPLHSHAMFAQPTPPHVLNMGVRRAAAPVKEPLTGHSVYDGYAKHPITGDESTSSQALLQQQQQQPNAGNIEHPYAHMFGPPPMGDPGTDGSVGGLPWSGGLMFAPSSRDIEQMMYAGYGMMPRGGPGHVDYSAGEAVDGRLLPHHVSGTGKEGMDGGAPVPPHVTQGSQQSSALASSSATAPVSAGIVQPLPSRFGGSAWTNEGVQNVFYTGSPHLPTDDRLNESLDLRQVEDHIGRLLGFRDKGTPTPPPGQLGDSLPRGAPGFSPLLRSPAHRTKELSEGGVQQQQLQQQQQQQQQQQQQQQQQQPTQQVQQQLYQLQQLQQLHLQQQQQPGPHGVSFYGNADGTMWGDAEARRFVGMGGHGVVPKTQQQQQQQQHLMMLMHAGHVVHSHPQGARVGPMPTGISNGIGIGLQSHSPDVTSSAGGPPRQQQQQQQQQQQQQQRSLPGSFPVVVGPPRADPMWGGQASQAQSPYSIDIRGSGQGPQGVNGVMQQRDGNSNPMYGQRGGGPFAIPGQSSSVASSSSVTWDTPASIIDRNERGNVGGGGGLGRGGYGMGDAPPQPHANGRDGPAMLHQRDNVASLLEGMSLSDRFERFDDFSSRPVTKRTPTGSHIELVTRQMESLLTEISPSTGDRSRREALFARLQTLVSRHWPNASLHVYGSSANNFGLKACDMDVCLMNDADEKAQATMVKKLARMLRKDRMSDVLPLPKARVPIVKFRDPSSGICCDICINNRLALHNTRLLQTYSTIDARVVSLARVVKYWAKRRQINEPYMGTLSSYAFVLLVIYYLQTRPVPVLPCLQSLTPPGQSSIPEVDVDGHDCYFFDSIPALRQYGFGDAVNGNTETLGDLLAGFFKYFAHDFDYHDSVVCVKTGRLASKADKEWSLKNNSRTDRYWICIEDPFELTHNLGRVVDKNTLFEIRGEFMRGYRLLCDGGDLHAVCEPYKHSRT* # PASA_UPDATE: g8881.t1, single gene model update, valid-1, status:[pasa:asmbl_7783,status:3], valid-1 NODE_4_length_82152_cov_44.3151 . gene 22161 23543 . - . ID=g8881;Name=g8881.t1 NODE_4_length_82152_cov_44.3151 . mRNA 22161 23543 . - . ID=g8881.t1;Parent=g8881;Name=g8881.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 23421 23543 . - . ID=g8881.t1.utr5p1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . exon 23242 23543 . - . ID=g8881.t1.exon1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . CDS 23242 23420 . - 0 ID=cds.g8881.t1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . exon 23097 23147 . - . ID=g8881.t1.exon2;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . CDS 23097 23147 . - 1 ID=cds.g8881.t1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . exon 22832 22964 . - . ID=g8881.t1.exon3;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . CDS 22832 22964 . - 1 ID=cds.g8881.t1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . exon 22540 22687 . - . ID=g8881.t1.exon4;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . CDS 22540 22687 . - 0 ID=cds.g8881.t1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . exon 22161 22412 . - . ID=g8881.t1.exon5;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . CDS 22315 22412 . - 2 ID=cds.g8881.t1;Parent=g8881.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 22161 22314 . - . ID=g8881.t1.utr3p1;Parent=g8881.t1 #PROT g8881.t1 g8881 MSSSDSAAPVATDAKSDQNNSGSRNISPSATPAAAPPKADTSAMLAKFKSTPSLSQSARRLQKELAEVTLDPPCNCSAGPKGDNIYEWVSTIMGPQGSVYQGGVFFLDIHFTQDYPFKPPKVTFRTRIYHCNINSQGAICLDILKDNWSPALTMSKVLLSICSMLTDPNPYDPLVGSIATQYLNDRATHDKIAREWTKRYAT* # PASA_UPDATE: g8897.t1, single gene model update, valid-1, status:[pasa:asmbl_7779,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 68000 69273 . + . ID=g8897;Name=g8897.t1 NODE_4_length_82152_cov_44.3151 . mRNA 68000 69273 . + . ID=g8897.t1;Parent=g8897;Name=g8897.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 68000 68032 . + . ID=g8897.t1.utr5p1;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . exon 68000 68092 . + . ID=g8897.t1.exon1;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . CDS 68033 68092 . + 0 ID=cds.g8897.t1;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . exon 68281 68401 . + . ID=g8897.t1.exon2;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . CDS 68281 68401 . + 0 ID=cds.g8897.t1;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . exon 68618 69273 . + . ID=g8897.t1.exon3;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . CDS 68618 68907 . + 2 ID=cds.g8897.t1;Parent=g8897.t1 NODE_4_length_82152_cov_44.3151 . three_prime_UTR 68908 69273 . + . ID=g8897.t1.utr3p1;Parent=g8897.t1 #PROT g8897.t1 g8897 MAVLSTWGMVISHTGGSHDQGVDFFGTWDIPNVAAKAVPVVGQCKDYSGSVPVASLREFESVLLRQQQHSLGVFMSTRKLSTPSLVFLHSSTASIISLVFDVNAQLVTSLCMNPRARLTIPGVSFGFQIRAIGVGPPRRHPVVLVRNTLAHVHTPP* # ORIGINAL: g8883.t1 original gene structure, not modified by PASA NODE_4_length_82152_cov_44.3151 AUGUSTUS gene 26627 28780 . - . ID=g8883;Name=g8883.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS mRNA 26627 28780 . - . ID=g8883.t1;Parent=g8883;Name=g8883.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS exon 26627 28780 . - . ID=g8883.t1.exon1;Parent=g8883.t1 NODE_4_length_82152_cov_44.3151 AUGUSTUS CDS 26627 28780 . - 0 ID=cds.g8883.t1;Parent=g8883.t1 #PROT g8883.t1 g8883 MGRPTQVAAKRSVAPPNAKGNGAVVAVGAEATTAALLSRVSIQAGIVFAVAVACFANAIVGDYTFDDNTAVIDNADVSGNGTLVKLLYHDFWGTPMDEVFSHKSWRPLTVLSFRVVYRIFGSNATWQRLVNVLIHGIVSAMCIPTLRALGFADGDVSDAAHSAPGARGFSVFAAALIFAAHPVHTDCIPSVVGRAELLCLLGCLCAVLCHCRAVADGCVKTVAPRAAWTLGCVTAVALSLMTKEIAFMLPPMLVAHDLIRVLPFGSSLPNLGVAIRRTLSQPERRRLGTCILQWFSLAVVSAIYLSFRASISGSRFFFSWHDVHNPLPSLATVPKVMTICYLHTIYAKLLVAPISLSCDYSLNAIPPVTSIADPRNMLTLTVYAGLLWVLYFTLVRLPPGANRKRASLALAWLVAFFVPSSQVFFPIGTYVAERLLYTPSLGYCALVAVLADIFAGPAVSTEATRYDTPRRGHQRSSVRRLSTMFLVALVVLYAGRTFVRNADWRNNGTLFKSAIEQYPANAKMQMSYGVWQALQGDTASAKRQFENAVAILPTYASPYTQLGTLYTKENRIADAEPYFRRAVELDGEDFTAITGLGQTLTQLGQYEEGKRLLEHGLSLRALIQSSELASPLNNLGNAKALLGDVAGSIDAFRRSLEINPAQLAPRKNIYVVAKSAQLQHVFVSDDYLRMCDAKNVDEVREWALGVPEAAALLERCH* # PASA_UPDATE: g8874.t1, single gene model update, valid-1, status:[pasa:asmbl_7781,status:12], valid-1 NODE_4_length_82152_cov_44.3151 . gene 136 1095 . - . ID=g8874;Name=g8874.t1 NODE_4_length_82152_cov_44.3151 . mRNA 136 1095 . - . ID=g8874.t1;Parent=g8874;Name=g8874.t1 NODE_4_length_82152_cov_44.3151 . five_prime_UTR 1035 1095 . - . ID=g8874.t1.utr5p1;Parent=g8874.t1 NODE_4_length_82152_cov_44.3151 . exon 668 1095 . - . ID=g8874.t1.exon1;Parent=g8874.t1 NODE_4_length_82152_cov_44.3151 . CDS 668 1034 . - 0 ID=cds.g8874.t1;Parent=g8874.t1 NODE_4_length_82152_cov_44.3151 . exon 136 316 . - . ID=g8874.t1.exon2;Parent=g8874.t1 NODE_4_length_82152_cov_44.3151 . CDS 136 316 . - 2 ID=cds.g8874.t1;Parent=g8874.t1;3_prime_partial=true #PROT g8874.t1 g8874 MASNFFQNDGSFMEKFKAMQQQQQQQSAGSAPGTVAKASSAPQSAPAAAQPVPLAANSRSGAPLQQEARSAEKRARSNEEEDGKGKRGGREKRPRMGYDSDEETDGGTWEHRKRMEEMKKTEEEARLATERNKGKHHIAEFLPEAEKAKFMAKLAAAVKGESIHEAGNVQKEDDTKIKGDNI # ORIGINAL: g12866.t1 original gene structure, not modified by PASA NODE_617_length_20109_cov_39.323 AUGUSTUS gene 12322 14649 . + . ID=g12866;Name=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS mRNA 12322 14649 . + . ID=g12866.t1;Parent=g12866;Name=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 12322 12471 . + . ID=g12866.t1.exon1;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 12322 12471 . + 0 ID=cds.g12866.t1;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 12751 13424 . + . ID=g12866.t1.exon2;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 12751 13424 . + 0 ID=cds.g12866.t1;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 13682 13825 . + . ID=g12866.t1.exon3;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 13682 13825 . + 1 ID=cds.g12866.t1;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 14060 14184 . + . ID=g12866.t1.exon4;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 14060 14184 . + 1 ID=cds.g12866.t1;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 14402 14649 . + . ID=g12866.t1.exon5;Parent=g12866.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 14402 14649 . + 2 ID=cds.g12866.t1;Parent=g12866.t1 #PROT g12866.t1 g12866 MASSFVRGMAWPCVWAFILRVLLFMIGMHDYLGDRIEFSTPATSAKRVREGVFLRQQGISPYSGGTVHATPLVLGAFSVADCVGGTWAIYTLYAFCDVLVGVCLYRIAKQFRLSAKRAESDDRASYHTDVSDDILMPREDDDGYARRVACMYLYNPIVVAGCISLSTALFTNTALAVALAAACTGHAFVVGVACAMMASESLHLVVLWPAIALVAAVGPVTRLSAPHRHAWTRMACTRMFTCVAGLAAASCALVWWSWVAAGGTWDGVHATHGFALRVDDLTPNIGLYWYFFVEIFDHFRSFFLGVFHLHAFIYAAMLTPRLQQHPLFLSVVLLGLVTTFKPYTSVVDIAFYASFLPVFSHVFRYMRTLFVSVNLFLFAGMLGPSFLYLWMSTSAGNANFFFAATILIAAANFLLLSDITYAVIRRDWDLLNGPLTPVTWRVLLSS* # ORIGINAL: g12863.t1 original gene structure, not modified by PASA NODE_617_length_20109_cov_39.323 AUGUSTUS gene 21 2710 . - . ID=g12863;Name=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS mRNA 21 2710 . - . ID=g12863.t1;Parent=g12863;Name=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 2477 2710 . - . ID=g12863.t1.exon1;Parent=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 2477 2710 . - 0 ID=cds.g12863.t1;Parent=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 542 2287 . - . ID=g12863.t1.exon2;Parent=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 542 2287 . - 0 ID=cds.g12863.t1;Parent=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 21 113 . - . ID=g12863.t1.exon3;Parent=g12863.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 21 113 . - 0 ID=cds.g12863.t1;Parent=g12863.t1 #PROT g12863.t1 g12863 MASLGAPPSLDRRASTMQRKSPLLEAALYGDVEKCKDLLDVKGSSPSDANSKPVNEVGPQGVTALHLAAAMGHVKCVQFLLDRGADVSAVDDDGRLALTRACAGGKIDVAQLLYVNGPPAHINRQARNNGWTPLHYAASAGHADMCAWLITQPSVAYFKDKEGRTPDELAAIAGLDSLARLLASHGSKVRVEHGIDQPDLKFQHPQTGPFPVVTAGTVARLTEQLAERADLDYMKTFLLTYRSFTSPQDLFSAVRTMFDAASVEDAASPSLDGVGMGSGSGSGSGIETRIDGKGEAKPKGQSLQLNLLALLQMWTSRSKNLDPDIFHDVSVLAQMDALAASTQGTANNSIAASADILRRQIYPTKSDDPQSPQLSDFRSRSPSSSSTTSNVSLSLQFAPPPQSQGEHKGRPSTGSISIVPELRGRTSSLDLPSRPNLDRSVSPPPSPTRQVLCVRLFESKEVANIGVRPDMTYSEVLTTVCGKRLLDPAKHSLRLADVGAEMSLADQLGAPPPTVLNLCPLLPPVPRVSVPSSSNSPMTARAASLSLESIDSVGWEDGPRSEPTSPRAGKLVVEFDPADFVDASLSAAQITAMDQASFAAIAPKECLGQAWSRQPGYAPNIVALTKRFNQVSAWVVELILGAQTPRRRAKSIEKMIDLAQKFMDLNNFHGVTQVLAALKNASINRMKRSWA # ORIGINAL: g12865.t1 original gene structure, not modified by PASA NODE_617_length_20109_cov_39.323 AUGUSTUS gene 10659 11441 . + . ID=g12865;Name=g12865.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS mRNA 10659 11441 . + . ID=g12865.t1;Parent=g12865;Name=g12865.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS exon 10659 11441 . + . ID=g12865.t1.exon1;Parent=g12865.t1 NODE_617_length_20109_cov_39.323 AUGUSTUS CDS 10659 11441 . + 0 ID=cds.g12865.t1;Parent=g12865.t1 #PROT g12865.t1 g12865 MYPQDNRQPASSCAWELATHAGCDRNSRKVEKDRAHEGAEAVPWPNGTETHIFGLGAVSNQAITSHQIAYDAIININNGNINSNTARTTAHTHAMGQYDLEIRVFPLLGFNGQPYLPGTAQTARRTSHTRQPMPPAQPPHEMHGVQYEGADVDALPLQQQAGLAPHVELPVREVRRMKRRATKDAEKARRRSRRADLLSVADCYVPNVFDGIGGLLRRNDTAHAEAGNVNIDDLSILMHLETFSTLEDGGMSSILNGLAS* # PASA_UPDATE: g12864.t1, single gene model update, valid-1, status:[pasa:asmbl_8506,status:12], valid-1 NODE_617_length_20109_cov_39.323 . gene 5094 9134 . + . ID=g12864;Name=g12864.t1 NODE_617_length_20109_cov_39.323 . mRNA 5094 9134 . + . ID=g12864.t1;Parent=g12864;Name=g12864.t1 NODE_617_length_20109_cov_39.323 . exon 5094 6369 . + . ID=g12864.t1.exon1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . CDS 5094 6369 . + 0 ID=cds.g12864.t1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . exon 6796 7575 . + . ID=g12864.t1.exon2;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . CDS 6796 7575 . + 2 ID=cds.g12864.t1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . exon 7848 8230 . + . ID=g12864.t1.exon3;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . CDS 7848 8230 . + 2 ID=cds.g12864.t1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . exon 8492 8768 . + . ID=g12864.t1.exon4;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . CDS 8492 8768 . + 0 ID=cds.g12864.t1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . exon 8928 9134 . + . ID=g12864.t1.exon5;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . CDS 8928 9112 . + 2 ID=cds.g12864.t1;Parent=g12864.t1 NODE_617_length_20109_cov_39.323 . three_prime_UTR 9113 9134 . + . ID=g12864.t1.utr3p1;Parent=g12864.t1 #PROT g12864.t1 g12864 MSSATGGAKKNAGAVSVVTARPPAAKQPHCVPQAVQRICMDLRPFVRWWSCLVLAAILAAGILLPLIVYHGVTRTELKNLQDQLADAAGEEVVNVQDVFKRTLHAVENLRMALNLAPDGGLSYSQFAESVSLLHRPVHAAASFMWMPLVRTENRSAFESHTRSINRNVGEFANFTILDREAMQPPIALSQRFDLAAPIVTTVAGNRSMYLPMLYVLAADDIAADRSLVGVDMLLTLNIVNFTRSLVSGVPDLAMNIVATGDRLSRGLLISVPVYKGLAPTTVEERLAKATGFLCVAAGVSRLADRGRLHNTSLEIHIFDEEGLLYAAPKDAARVPSSPSDVPSVHGTRVETTITFVNKKYVFVAVPTRKLVEGATSPGPLVFALLTGAGFSILLAGAIVAIRTIVLTQQRMAASERQRRCVTEMIGFVNHELRNPLNAIMGLLDHATRVTEGIVATSSASKVTSSLTSTTVASSTATSTTVASTGAPIVAGGLSHALESGKPHSALSSTSAQRLSSRDEGDVTDTAAFVERPTALLRTSSRRSNAGSGAVATDFAEKMVTVLRDLRDTGQMCSLMKHIIDDALDIRRLEERGLKIVCAPVSLARVLEDVTAIVQPKLSEKPTLSLTVSSFDDDVVFLSDAVRVKQLLLNLVVNAIKYSENGVIKVHVEAVKSGESLRFAVQDNGKGIEDAKKQYLFHPFMQLNGSARHQGVGLGLYLCSMLVESMGGEIGFESTAGVGSTFWFELPYEAAVIVDCDGDDSWGESMSTEEGHGMGGPNQGHVAVAVPSVGETARGCAGGGLELRMISACGAAESAAAETPTDKRIHAPSAGGPSPNSKPRKSVPPRHLVCDDMGVNRVVLKRYIQSAFPDIVVDEAENGLVGVRLAQEREYDIVWMDVQMPVMDGIEATKRIRASPQCQQTTVIGITGDITPEEVARYRSAGMHDVCGKPVSRVTIVETIRKWRRRS* # PASA_UPDATE: g12867.t1, single gene model update, valid-1, status:[pasa:asmbl_8507,status:12], valid-1 NODE_617_length_20109_cov_39.323 . gene 14730 19905 . - . ID=g12867;Name=g12867.t1 NODE_617_length_20109_cov_39.323 . mRNA 14730 19905 . - . ID=g12867.t1;Parent=g12867;Name=g12867.t1 NODE_617_length_20109_cov_39.323 . five_prime_UTR 19905 19905 . - . ID=g12867.t1.utr5p1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 19770 19905 . - . ID=g12867.t1.exon1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 19770 19904 . - 0 ID=cds.g12867.t1;Parent=g12867.t1;5_prime_partial=true NODE_617_length_20109_cov_39.323 . exon 19389 19571 . - . ID=g12867.t1.exon2;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 19389 19571 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 18963 19110 . - . ID=g12867.t1.exon3;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 18963 19110 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 17982 18562 . - . ID=g12867.t1.exon4;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 17982 18562 . - 2 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 16611 17792 . - . ID=g12867.t1.exon5;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 16611 17792 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 16263 16349 . - . ID=g12867.t1.exon6;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 16263 16349 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 16050 16133 . - . ID=g12867.t1.exon7;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 16050 16133 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 15732 15824 . - . ID=g12867.t1.exon8;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 15732 15824 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 15113 15370 . - . ID=g12867.t1.exon9;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 15113 15370 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . exon 14730 14965 . - . ID=g12867.t1.exon10;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . CDS 14840 14965 . - 0 ID=cds.g12867.t1;Parent=g12867.t1 NODE_617_length_20109_cov_39.323 . three_prime_UTR 14730 14839 . - . ID=g12867.t1.utr3p1;Parent=g12867.t1 #PROT g12867.t1 g12867 IRIRSVAIGGRHCLAATVDGQVFSWGDGSSGQLGHGNTESYSMPLLIEALVGKSIASVSCGDDFSAFNSENGLLMTCGSGARGALGHGDYNDHLKPRLVESLLVKEIASVSCGAAHMCALTGDAVMYGWGLGQHGRLGLGSEESYPSPQQIPMPMGYTPKTVICGVDGTMVITDMGRLLACGNNEDNKLALNSRFGFLMQRKHVLNRAVIAAKSLAPVKILNKHRVTAVALGQSHSAVLCDSGCCYMFGCNREGQLGDGTTKARDVPIVVKALYEKKLKAVACGSMFTIGVTYTNEVYSWGRGDDGRLCTGKVTDHYLPVQITLPTESALGVNALACANAGGIMVLEIEAPEVTPRNPRKERSGSAPASGRRASRARSAGNRSGDEDGAVSAHSSGYVRRGSSGSSASIGDIGPDDANVPDWLKSEMENAEDAPPLDPLLAQSVSHVALSASAPGAQMRSSSQGLVASRSASQSSVARSRSQSHVHDYDSRDARDQHDARVEYRGSGAPGDYGASGDSDGSNMDSGAESDQIAAEMAAMMENDLDFEIAKELANLGGSAGRESMGDGSGSSGTSSSSVLSSSARARQQMMQIQAQMAPKVPSSSELLPEADGEAHLTAAEERLGSLNASTSTRSSNPSSGGMAGSTPGPADAQFAALYASATASSNAMNKSATSAGIAAAKAGGGSFANLANSGNTGKHSSSMTDTHNGDGATSGAENVDGRVRSGKGQRKDKERDKRKSDGQTPKKQRKNAKEKEEAREMRRSARRDERNKIVEAQQKQEEAQTKMKVEIDEFRRRYEQQEQELREYKLRSMELQQRLESEMREAERGAKPPPILPPVVTADQRTRLIHNAIGSGGALAPTPAPPTHLAPVPIQSPSVAAASRGLPGSPSMHDEVARVTEARLKNEISDLKLALARQTEAFTENNDMVRALQEQLRALRDKQEQQETKMRSSVCTLM* # PASA_UPDATE: g6503.t1, single gene model update, valid-1, status:[pasa:asmbl_8494,status:12], valid-1 NODE_615_length_20117_cov_60.1949 . gene 3195 5594 . + . ID=g6503;Name=g6503.t1 NODE_615_length_20117_cov_60.1949 . mRNA 3195 5594 . + . ID=g6503.t1;Parent=g6503;Name=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 3195 3297 . + . ID=g6503.t1.exon1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 3195 3297 . + 0 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 3487 3568 . + . ID=g6503.t1.exon2;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 3487 3568 . + 2 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 3757 3836 . + . ID=g6503.t1.exon3;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 3757 3836 . + 1 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 4083 4267 . + . ID=g6503.t1.exon4;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 4083 4267 . + 2 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 4432 4527 . + . ID=g6503.t1.exon5;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 4432 4527 . + 0 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 4726 4863 . + . ID=g6503.t1.exon6;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 4726 4863 . + 0 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 5007 5155 . + . ID=g6503.t1.exon7;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 5007 5155 . + 0 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . exon 5407 5594 . + . ID=g6503.t1.exon8;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . CDS 5407 5440 . + 1 ID=cds.g6503.t1;Parent=g6503.t1 NODE_615_length_20117_cov_60.1949 . three_prime_UTR 5441 5594 . + . ID=g6503.t1.utr3p1;Parent=g6503.t1 #PROT g6503.t1 g6503 MNRIPAAPKGLATGLKVLFGLGAVAYGVEQSMYTVDAGHRAVLFSRLNGVQPTVYDEGLHFRLPWFQWPIVYDVRSKPRRITSLTGSKDLQMVNISLRVLARPQVAHLPLIYQTLGTDYDERVLPSICNEVLKSVVAQFNASQLITMREKVSLLIRQQLVQRANDFHLSLDDVSITDLSFGKEYTAAVEAKQVAQQEAQRAQFIVEKAKQDRQEKIVKAEGEAAAARMIGDAIKENPGFLELRRIDAAREIANTVSQSSNKIYLNSNSLLLNVDEQHIDLAVIAPKKK* # PASA_UPDATE: g6505.t1, single gene model update, valid-1, status:[pasa:asmbl_8496,status:3], valid-1 NODE_615_length_20117_cov_60.1949 . gene 13561 18297 . - . ID=g6505;Name=g6505.t1 NODE_615_length_20117_cov_60.1949 . mRNA 13561 18297 . - . ID=g6505.t1;Parent=g6505;Name=g6505.t1 NODE_615_length_20117_cov_60.1949 . five_prime_UTR 18131 18297 . - . ID=g6505.t1.utr5p1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 17647 18297 . - . ID=g6505.t1.exon1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 17647 18130 . - 0 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 17117 17199 . - . ID=g6505.t1.exon2;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 17117 17199 . - 2 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 16545 16685 . - . ID=g6505.t1.exon3;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 16545 16685 . - 0 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 16084 16230 . - . ID=g6505.t1.exon4;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 16084 16230 . - 0 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 15439 15614 . - . ID=g6505.t1.exon5;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 15439 15614 . - 0 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 15071 15223 . - . ID=g6505.t1.exon6;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 15071 15223 . - 1 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 14611 14790 . - . ID=g6505.t1.exon7;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 14611 14790 . - 1 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 14291 14404 . - . ID=g6505.t1.exon8;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 14291 14404 . - 1 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 13988 14086 . - . ID=g6505.t1.exon9;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . CDS 14059 14086 . - 1 ID=cds.g6505.t1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . exon 13561 13867 . - . ID=g6505.t1.exon10;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . three_prime_UTR 13988 14058 . - . ID=g6505.t1.utr3p1;Parent=g6505.t1 NODE_615_length_20117_cov_60.1949 . three_prime_UTR 13561 13867 . - . ID=g6505.t1.utr3p2;Parent=g6505.t1 #PROT g6505.t1 g6505 MRLSRRPLRSLALLAASILALFAILRQCNDLAGFRKLSWIVGRPQEEVVKGRFYERRDVTAAGQSVLESTFNEDILDASSLADNTSGHHTANRTAWESHCGNCSGHGVCHAPAVHAHVQSGPFCLCHVDNARGWWRGINCDVCTGNRDVASGCTRCSPGFEGELCERSVFLHLLTPQGRWGDDCPIALKNATKGVLIRAGRAMRSRTSLTQFGLSSAAASLLPSPLPTDNELPSLIAARGCGAFRIVRRPRDRPESGQMQGPSIAYLIVAHHSIAHLSRLLSSIEDPNAIVMVHIDAKVPAHVFESAKALVACRAPRVRLCTHRSLITYSGFSRLEADIICIRELHEWSEDWTHVVNLSGLEYPAMAASARRAYIRGLGNHSAIASFASPQLDWRFQREFAEGNGEVTWTGRTRQLPVGIETMRHGSAYNVLSRTLAAYAVGNAPEIVTLTNFCRGVYSPDELYWATLASQGEWKSNNLPRRWRAKFIKWQKRPWTQRLRH* # ORIGINAL: g6504.t1 original gene structure, not modified by PASA NODE_615_length_20117_cov_60.1949 AUGUSTUS gene 5991 12840 . - . ID=g6504;Name=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS mRNA 5991 12840 . - . ID=g6504.t1;Parent=g6504;Name=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 8500 12840 . - . ID=g6504.t1.exon1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 8500 12840 . - 0 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 8055 8179 . - . ID=g6504.t1.exon2;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 8055 8179 . - 0 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 7640 7704 . - . ID=g6504.t1.exon3;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 7640 7704 . - 1 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 7406 7460 . - . ID=g6504.t1.exon4;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 7406 7460 . - 2 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 7080 7134 . - . ID=g6504.t1.exon5;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 7080 7134 . - 1 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 6560 6698 . - . ID=g6504.t1.exon6;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 6560 6698 . - 0 ID=cds.g6504.t1;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 5991 6325 . - . ID=g6504.t1.exon7;Parent=g6504.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 5991 6325 . - 2 ID=cds.g6504.t1;Parent=g6504.t1 #PROT g6504.t1 g6504 MRRLSQLTKLVLVFGVLGSIILCNSGVDAGNWITEITAPQNSVADVDPVSLFAIIADAANVIATERSANNTQNIIVRVLLRPSLKNVTWGAVANRSMLGLDVGVDARIAIVGSGVKVTCVPKAQLIVPTINVYSGALDLSNLTISGCESTSAAVSLFNVTGGAALSLSGVSVTGTKRARVLNVAGTATAALVNATIATVDMGRADAGVGVVSGGGTCTVDRSSFVGISSGATSSDRGASGGGAFLVRDNGTLTISNSKFRDITVSRLSGGVVFVSGRGNVTLADSTFQSVFAGTSGAVAAMGDTNSAGFLFMHGCVVLGASSVASGAVISLRFNYAAIVSECTFSDLYTEDSGGAINVVENAVLSLSHSTISGSTAMLYGGVFNVVGSAVVTVVNSTMEDGTAEGIAFDVDFFFGGVGGLAVVADSATLTLDGCTVRRMTAFDSGGVISAQLDATVRATNTTFAVARAQINGGFASCQGSSLLVLDRCTLSECSAGATSGFVHGVGTSRTVLTSSNVTTTSSDSGGGGFAFMEEQGSLVVASSTLATSTAQLSGGLLLLVDQSSANISFSRIVGVRAKDGGGGLASIAGSASLVLVSSLVENATSTTSGGFVRATDTSRVVLSRVNVTGSTSLTGAGGFYFVDRSASVNASSSWFTRGVAYKEGGGFAIDGSATAYFVATTFSDMRSLQSTGGLGRISFSAVVSMIDCAVLVSRALGNGGALHASEDAKCVLRQSSFSSSRSEGNGGWLCLAGRASASISACNITGSSARGSGGSIALFGNTNARISASVFTGSQSLGGDGGFALVTDSAILRMDGSRGQQLTAQLSGGAIALKSLASIVVLSSNFSDCNALRNNGGFAYAQDNSRLELSRVFLERMSTGTASALAGSGGVGVGCVGSEGGAFAADGHASLVMNDTEATSLSTTGPGGFLAATGVDVTVVLRDCSIRNAQAGTGGAMSVFGARVDMTRVRIQNATAEGNGGCIYADAEAKVTLDAVNMSDCSAGSVIGTFGAGGCMYVGSGVAITVKTNSTAQSLRALRGPGVFSVLPLDSAAVALLSFFNATTMYSDRLSEDWRAGGTISGRASFMHITPSTTLAAAYPGTELPRIRVVVADFYNNSISLPGDNPLVFEVVPIWPTLRCADTPGSQQADSLNQCVGAANGATATCDDSKCALVGSVGGEFGSRSFAEMGSFSIFAPPGTYSLRLVSKNPFLYGSLDANAERRALLGGVAMTVTVGDCPPGTTLAASPRLYSCVANDQGSPGPSVGLIAGIVVPCFCALLVGAVLYGVWKRRQLERKFMTWRIDADELIWKEEIGRGAFGVVHLGSFRGAAVAIKMLTIDALGIHPLTASAAATAEASSAEEEAACEPVGVASGNTDDRLDTIATRHLSTTPASHSVGLLSRTSVWSFLFSSHYRSTRKEANAALADFKREIEVMVSLRHPNVLIFMTEYRVNYPSGADTMFLNGRCYTQGAVLKRPHVSLVTEFMANGTLYDALASEAYAFDWKLRLSIALGVSHAMEYLHSGRPPILHLDLKSLNVLLSASMEPKVSDFGLSCLQTNKKLLRGGQMGTLLWMSPEILCEKPFSLPADVFSFGIILWELLARKRPYFEATVPVGALSIEIAYQGRRPLRPLNCPAPYLRLMNECQDDFALARPRFSDITPRLKAYLVQCTKAMESPDEGGHLPEWLMQPELEVPKIGSLESLQ* # ORIGINAL: g6502.t1 original gene structure, not modified by PASA NODE_615_length_20117_cov_60.1949 AUGUSTUS gene 287 2378 . - . ID=g6502;Name=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS mRNA 287 2378 . - . ID=g6502.t1;Parent=g6502;Name=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 1404 2378 . - . ID=g6502.t1.exon1;Parent=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 1404 2378 . - 0 ID=cds.g6502.t1;Parent=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 780 1098 . - . ID=g6502.t1.exon2;Parent=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 780 1098 . - 0 ID=cds.g6502.t1;Parent=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS exon 287 555 . - . ID=g6502.t1.exon3;Parent=g6502.t1 NODE_615_length_20117_cov_60.1949 AUGUSTUS CDS 287 555 . - 2 ID=cds.g6502.t1;Parent=g6502.t1 #PROT g6502.t1 g6502 MPSFTRKAAPVNWDALAAIDVDEIQRKGRPGEGEEDDEYVIQLEEAYDWAVTASFTEEDAKKDPSRAVRLVRLMQLIAETKNHQLFSADTALDKCESDLKLAHRQMEDLRRMQYADPKSQQLVQEKQNLYMEISSLEDKLAQKQAVIDRMRVAGPSGDPSVLREENDSLQQRVRSLEEQMHTLDETLLKERQQMQKQLNELSDTRDRLRDTEKERDRLTVDVGEYRQQIEGARMAGTRRGEDEDMRIQIRQKNTEIGKYLKEIQALSTENADLGKRFRSMREDLESAVKEMDAVASKNVELQKALDDADLRLDDAAREREMLTAQVDDLTEQLHERGSADEGIMRSLEQRVAEWTELLQAKESELVELRRLVVQQKTTIAAQTRDLEGTPVFALQKANAEKDEVVRMLRDQLESATKALEEYADRPPTARKREATSTSIAEVENLKTRLADATADVADADRRQKQAEENARAKDSELVAALARMQEYERGTYGLYEAVQEIKERKAQIAVRDNDVAALTKE # ORIGINAL: g13922.t1 original gene structure, not modified by PASA NODE_1132_length_13702_cov_39.0436 AUGUSTUS gene 103 5313 . - . ID=g13922;Name=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS mRNA 103 5313 . - . ID=g13922.t1;Parent=g13922;Name=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 5032 5313 . - . ID=g13922.t1.exon1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 5032 5313 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 4882 4936 . - . ID=g13922.t1.exon2;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 4882 4936 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 4654 4787 . - . ID=g13922.t1.exon3;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 4654 4787 . - 2 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 4105 4191 . - . ID=g13922.t1.exon4;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 4105 4191 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 3665 3784 . - . ID=g13922.t1.exon5;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 3665 3784 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 3302 3480 . - . ID=g13922.t1.exon6;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 3302 3480 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 2678 2780 . - . ID=g13922.t1.exon7;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 2678 2780 . - 1 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 2404 2508 . - . ID=g13922.t1.exon8;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 2404 2508 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 2133 2252 . - . ID=g13922.t1.exon9;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 2133 2252 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 1757 1906 . - . ID=g13922.t1.exon10;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 1757 1906 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 1475 1535 . - . ID=g13922.t1.exon11;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 1475 1535 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 1184 1296 . - . ID=g13922.t1.exon12;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 1184 1296 . - 2 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 819 964 . - . ID=g13922.t1.exon13;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 819 964 . - 0 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 484 639 . - . ID=g13922.t1.exon14;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 484 639 . - 1 ID=cds.g13922.t1;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 103 200 . - . ID=g13922.t1.exon15;Parent=g13922.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 103 200 . - 1 ID=cds.g13922.t1;Parent=g13922.t1 #PROT g13922.t1 g13922 MSAAGGDIDSPPATAPTCRRIARDPSERRSHARTLRGISSPGMFFALAIAVAAVVLSRAQSPPQPSDGLPAVDSSSTEFTSTLESQVELVCGEQGCDPTNEEQMREYIAIQQNLGTFFVNTNKYDSAIEAFTSILKHRSHYDAFIGRGTAYAKRGQSGDFHRSLYDFSQAIKMDPSGTDGWHRRAEALSGAGNFEAAVRDITRAIELRPNSATLYRSRGAINFFLKDLVAGQADFERCVAIDPKDMGVRYYLGLSLYRQGFLGAAAAVFDSAMKVEAPSPSVELLSLALALEPQHYQTGLQHALIMECSGHLLDAVESFQTLVRKHPASITARYLLGASYLEVGRFYDASRELTAAFAEPHAYDDEEARLDERKARYLRDMARYFHTKLDQPFKNVNFDADLEPLFRERWARSMPFLRDTHREWPGIRPETPDVARRSWKDLTPEAQKLVCNAIALGGVMDYRVEGIMINERVSRAMGLAALEIVQRTAAFVAAGVGRKRANAGVTLAWREIVDVAVRWHRVAQLSEPITWLDSLPKESFAASFNNHLLLSKRQEYAPHLIPYYDRALFVVKRLLLESYAPSWSNDPSLRQLIETAESPRDLLANMRKGFFVTNYIPSGIRQQQLEGVMLTVSGDV # ORIGINAL: g13923.t1 original gene structure, not modified by PASA NODE_1132_length_13702_cov_39.0436 AUGUSTUS gene 5686 7466 . + . ID=g13923;Name=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS mRNA 5686 7466 . + . ID=g13923.t1;Parent=g13923;Name=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 5686 6096 . + . ID=g13923.t1.exon1;Parent=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 5686 6096 . + 0 ID=cds.g13923.t1;Parent=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 6290 7192 . + . ID=g13923.t1.exon2;Parent=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 6290 7192 . + 0 ID=cds.g13923.t1;Parent=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS exon 7347 7466 . + . ID=g13923.t1.exon3;Parent=g13923.t1 NODE_1132_length_13702_cov_39.0436 AUGUSTUS CDS 7347 7466 . + 0 ID=cds.g13923.t1;Parent=g13923.t1 #PROT g13923.t1 g13923 MRLLLFAVLAACVAMPTTAAFISCADELPGAIVVLRNNSLFSNLSRVANPLYNEHPPAFVVLPRDAGDVQRALACAGRNGVPVALKAGGHSFAGYSSVPSPGFTIDFANMTAVAWVGNSTVRVQAGARWRDVYAAFKEHGGLWVVTGGLCPSVGVAGFTMGGGVGPCAREYGLAIDNVVRFTMVTADGSRVVTADADHNTDLFWALRGGGGSNFGAVVEIDFRVHEGPEEYTWGTVCYPPGADNTRAALAQLDGVAAALPGVTNVDAVLEPGGGLCLWIVHLGPKAETEAVLVPLTTDGAIAAATVSLSAHTCYWEMIQAFAEAHGYAEFDDDPFYSRTALVESVALVADVMASADAPPTCDQHLIHFGGAVSAVAPHETAFFWRSTEYMVYASCGFSNDDERATAVAFLDAWWAKMLPFVRGSYVNFIDRSLPNWKEMYYGGNLPRILDIKRRWNPAGKGPLHFAQEIDAPHAPPQ* # PASA_UPDATE: g13924.t1, single gene model update, valid-1, status:[pasa:asmbl_504,status:12], valid-1 NODE_1132_length_13702_cov_39.0436 . gene 8160 13486 . - . ID=g13924;Name=g13924.t1 NODE_1132_length_13702_cov_39.0436 . mRNA 8160 13486 . - . ID=g13924.t1;Parent=g13924;Name=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 13126 13486 . - . ID=g13924.t1.exon1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 13126 13486 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 12095 12907 . - . ID=g13924.t1.exon2;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 12095 12907 . - 2 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 11075 11895 . - . ID=g13924.t1.exon3;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 11075 11895 . - 2 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 10797 10892 . - . ID=g13924.t1.exon4;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 10797 10892 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 9964 10593 . - . ID=g13924.t1.exon5;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 9964 10593 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 9597 9719 . - . ID=g13924.t1.exon6;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 9597 9719 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 8821 9376 . - . ID=g13924.t1.exon7;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 8821 9376 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 8496 8662 . - . ID=g13924.t1.exon8;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 8496 8662 . - 2 ID=cds.g13924.t1;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . exon 8160 8315 . - . ID=g13924.t1.exon9;Parent=g13924.t1 NODE_1132_length_13702_cov_39.0436 . CDS 8160 8315 . - 0 ID=cds.g13924.t1;Parent=g13924.t1 #PROT g13924.t1 g13924 MNVADHSVPVRKSTVSGKHPVLLSGIDSASRSTVTRAPSETEWARRAVLGQAQSGAFVAAGGLATSGTPIASGGVAGSASGSGASAADTALVGRSEELLTIERSLEYFLNEKMAPVVVIEGGPGLGKTAMSDHLREYVRRLPAILRINIMMGHASGMNRRSSYYFVRSVFKNHFRAMGKKSLHEQQSYLRELLYQSPHLIDVLSLINDVISLQVPPTEVSLCLTGAARAEKTLGLLLAILGAISERSPTVLFVEDAHWLDPTSWQLLSKAVAELKSIMIVITTRPGPWTKVADAYDIASPVHRSSLAPGAGVGTSASNSALVAANRTPLGAISDDDPATRTCARQILESDRLIRISLGPLQPADTVQLIARKLGVDAGSVPQSVADFICQRGEGHPLFSEELLQALRNANVLSVADGTCIVTGDISSNSVLLSQLPTTIEGLMTSRIDQLEAGAALALKCAAVIGREFHLSMLQAMIPNYTGMDELRGYMAAFETLDLVYPSTEASMLTATALPNTNSTGPAFAPRGQVSTSSGGTSAVGSQKSTVTNSFKSLIDSKKGAGILLEEGAADGASGMPPIGVLRAAGGDAAESADPAPSIDDRKRKSTGAGPDVYMFKHEMLRETAYNLLLQAQRKLLHRSAAVFLETHSTQNSQALHAIAAFHWIQADMKRNALPHLVEACELATRKHACVEAITFIKDAEGIISEDVQLREKRPLKANLRHKLAVLTLNMGRIKESLDYHVEAAGLLDHFPKSRFSRRASFVFELSRLLLRWRPWRDPVLFAKTRDGLPMKVERMGSASTQETSGSLIPFERHGTHARTTRRELRLRLDVYTTFTMAAYYASKSDTFALSVLRSVNIIRKLKVTDPHSIVVYSMASLMFQLIGWNSLSERYLSVAQRACLSMGNGSQIALVHFICAVVVFNMTRHKDCNEICQKGLDVAFAIDDRFRQVELLFINTAAMLHSGDYVSAKERYGRLKGIAEKTMDGLFVYYCHCLEVDLRYQLPGGRDYAITLFEHLLTDSLFHSEDWDRFGKKVIYAQLARAYAITGKHARAREMLVRADSLVPNMKARHFLAMYAMRSLAEAWLILSLANPQDDAVAKSLKTSLEKLSKAGKRFKAAVPRVLHYQGLRQWGKGNKSAALSYLRKAASCAREILMPFEEAWALMHAEHIRTGGSAGKEAPIASTGRTNKVHPEELRDSVWNSLFGSRDQRVQTVAPKHLRIAASTGCDLHNLLEGALQRR* # ORIGINAL: g10660.t1 original gene structure, not modified by PASA NODE_3295_length_3806_cov_37.1643 AUGUSTUS gene 2340 3723 . + . ID=g10660;Name=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS mRNA 2340 3723 . + . ID=g10660.t1;Parent=g10660;Name=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS exon 2340 2350 . + . ID=g10660.t1.exon1;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS CDS 2340 2350 . + 0 ID=cds.g10660.t1;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS exon 2455 2501 . + . ID=g10660.t1.exon2;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS CDS 2455 2501 . + 1 ID=cds.g10660.t1;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS exon 2687 2793 . + . ID=g10660.t1.exon3;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS CDS 2687 2793 . + 2 ID=cds.g10660.t1;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS exon 3109 3266 . + . ID=g10660.t1.exon4;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS CDS 3109 3266 . + 0 ID=cds.g10660.t1;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS exon 3576 3723 . + . ID=g10660.t1.exon5;Parent=g10660.t1 NODE_3295_length_3806_cov_37.1643 AUGUSTUS CDS 3576 3723 . + 1 ID=cds.g10660.t1;Parent=g10660.t1 #PROT g10660.t1 g10660 MAEEEGPVADPDNTLRILVATDIHVGYMEKDPIRGEDSINTFEEILRIAQDEKARVDFVLLGGDLFHENKPSRRMLQRTMELLRRYCMGSQPNFVEFLSDPKMNFPNGFNTVNYQDPNYNVSIPVYSIHGNHDDPAGVGSPSRMPHTRAADSRNET* # ORIGINAL: g6354.t1 original gene structure, not modified by PASA NODE_2745_length_5256_cov_43.084 AUGUSTUS gene 678 4124 . + . ID=g6354;Name=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS mRNA 678 4124 . + . ID=g6354.t1;Parent=g6354;Name=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 678 927 . + . ID=g6354.t1.exon1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 678 927 . + 0 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 1070 1389 . + . ID=g6354.t1.exon2;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 1070 1389 . + 2 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 1510 1804 . + . ID=g6354.t1.exon3;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 1510 1804 . + 0 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 2086 2248 . + . ID=g6354.t1.exon4;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 2086 2248 . + 2 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 2579 2849 . + . ID=g6354.t1.exon5;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 2579 2849 . + 1 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 3001 3009 . + . ID=g6354.t1.exon6;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 3001 3009 . + 0 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 3144 3246 . + . ID=g6354.t1.exon7;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 3144 3246 . + 0 ID=cds.g6354.t1;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS exon 3601 4124 . + . ID=g6354.t1.exon8;Parent=g6354.t1 NODE_2745_length_5256_cov_43.084 AUGUSTUS CDS 3601 4124 . + 2 ID=cds.g6354.t1;Parent=g6354.t1 #PROT g6354.t1 g6354 MHQTVHGVPLRQSALAPTTALVTGARDSAVEHIHDECDVEDKHTHDGQLFGLRKRPRMPRPTPFALTRMLSTILLVWAICSVEGVSAAVDDDSLTTWKGKFFEWRDAYVNWAHDNGCPTGFFNTTQWLDMANSIDPEAITWEGAFTAFGKAQESWKALHPGCTVICKSPDDPATTAEECLWDGELPYGARDERVTCEWAYGAIPNGNAFPSGRRDSCITGLAAPDRFAPLASALYCSCASVDDPGYPSSVCHWPTGYVPPNLRVPDHGYCFYSTTTSPNAQTGLVKCAPTGSTPPSDFYNQIITRIKSSWSAGYWAFPEGTGEYDAYQVISSYITKSVTTDIRSLYSTTGMSVSVATSWTAIIASAESQAVMYTYLPPDACDRVTCFDTVIEILTEEFGDVAIVSNWLFSIEATLDELQATAGADVSTQDSNAICEVTPPSPIKSYVMDLVGIVINAVADVAAPPVAVALSIITSVASDVKSDSSDPYWNDNTQLYQTVATLKSNLNTAILDLKASLIRRFSACTTDPMQLRMLAATLPQNDIAAPSQSDIDSFIANQATPILTQRLVRLLFASKWNVCQISAVYNSKHGGSTYLNCQNEFSNTYNLPYDRWYPVHGAKPDIKSTTMLGGSAPTESTTAVHLWI* # PASA_UPDATE: g6052.t1, single gene model update, valid-1, status:[pasa:asmbl_9122,status:3], valid-1 NODE_737_length_18297_cov_39.538 . gene 3610 8658 . + . ID=g6052;Name=g6052.t1 NODE_737_length_18297_cov_39.538 . mRNA 3610 8658 . + . ID=g6052.t1;Parent=g6052;Name=g6052.t1 NODE_737_length_18297_cov_39.538 . five_prime_UTR 3610 3825 . + . ID=g6052.t1.utr5p1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 3610 3864 . + . ID=g6052.t1.exon1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 3826 3864 . + 0 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 3995 4280 . + . ID=g6052.t1.exon2;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 3995 4280 . + 0 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 4467 4992 . + . ID=g6052.t1.exon3;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 4467 4992 . + 2 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 5241 5605 . + . ID=g6052.t1.exon4;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 5241 5605 . + 1 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 5766 5850 . + . ID=g6052.t1.exon5;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 5766 5850 . + 2 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 5986 6317 . + . ID=g6052.t1.exon6;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 5986 6317 . + 1 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 6554 7056 . + . ID=g6052.t1.exon7;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 6554 7056 . + 2 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 7250 7394 . + . ID=g6052.t1.exon8;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 7250 7394 . + 0 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 7540 7707 . + . ID=g6052.t1.exon9;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 7540 7707 . + 2 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 8006 8099 . + . ID=g6052.t1.exon10;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 8006 8099 . + 2 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . exon 8473 8658 . + . ID=g6052.t1.exon11;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . CDS 8473 8554 . + 1 ID=cds.g6052.t1;Parent=g6052.t1 NODE_737_length_18297_cov_39.538 . three_prime_UTR 8555 8658 . + . ID=g6052.t1.utr3p1;Parent=g6052.t1 #PROT g6052.t1 g6052 MPLGFDSKKKKQAQDAPQQPRQSPKPQKKKGSVKDKSTEDHEREKRKASLAQSRSVSSSLEDIIEAQLSLQNPHPSTSKRSSATSSPTSHHSREKSQTDSPVPVRPSEGIDVLEVRVFGARGLNATADTSVFAEVRLQQDVFYTSTKEDGRNPRWDERFNFVVHDSDGWLSITLKDASKGGSAIGRTVVSVAATLQQLQQQPSGQQGEGTWFVIEGTPGAELKLAFRATTEQAMTQQSAGMASSANGTPSNGATSGGAEALHDSTADSQDGQGSPVPTRLFNRSVRGSIHKRSITPDSATLRRWNSIGGKHSEQLESVLSQLNGQNAQNGQNAAGSTPTPTIAPVEGDGDTVSPMPYRETVERGPPSPALSSSTPLVFANPTPPADPSPHGEHGSLRNRRRPSISARIPKLFLQVDDEVRKTSTMGPLTRQGIRYAFLGAFPEVEFPEPFPKVYARDPQAGVFYELEDFSEIGENAVLRVRTGRLTLPSSMAHRTTVDLGASGTLIGSVSTASDSGRLDAIERRLGELFQLLTGNAAGTQQDLGAPGKIRTRAPSSLGIPLVSPVLLHVSGPLSPVISDSAADVEQSMRRANEQTRKLRRDLARMRDEFIEQRAEFIKAIDACQLQIKERMESIVSGTPSGVVMPRVRLTATRERLSKSFGSVEARVGLMEQRVNTLTRDVVSRHCKLRQSELEIMSSEIDGLRGELSACKEMYASLKGGMKGVWEKELKNVVAEETFIKETGEDIEDIEDAFEQLTGTAATLQKLVAVQETLPPLNVDFGVEDLSARDDTVQDMLDDIRGTFVDNAARLRQIENAERYRRATLQMERENGPLAQFEKSLRTFSKKLRPTGGIDSVEARRREKDSEVLKAVLLS* # PASA_UPDATE: g6054.t1, single gene model update, valid-1, status:[pasa:asmbl_9123,status:3], valid-1 NODE_737_length_18297_cov_39.538 . gene 11391 13172 . + . ID=g6054;Name=g6054.t1 NODE_737_length_18297_cov_39.538 . mRNA 11391 13172 . + . ID=g6054.t1;Parent=g6054;Name=g6054.t1 NODE_737_length_18297_cov_39.538 . five_prime_UTR 11391 11568 . + . ID=g6054.t1.utr5p1;Parent=g6054.t1 NODE_737_length_18297_cov_39.538 . exon 11391 12172 . + . ID=g6054.t1.exon1;Parent=g6054.t1 NODE_737_length_18297_cov_39.538 . CDS 11569 12172 . + 0 ID=cds.g6054.t1;Parent=g6054.t1 NODE_737_length_18297_cov_39.538 . exon 12301 13172 . + . ID=g6054.t1.exon2;Parent=g6054.t1 NODE_737_length_18297_cov_39.538 . CDS 12301 12779 . + 2 ID=cds.g6054.t1;Parent=g6054.t1 NODE_737_length_18297_cov_39.538 . three_prime_UTR 12780 13172 . + . ID=g6054.t1.utr3p1;Parent=g6054.t1 #PROT g6054.t1 g6054 MLHQLGVPSKMSTSLSISLEAPEVRYPIELALRPGDEAGTPSARLLTGASKALLTFVESQPASLTASYRLELNPVAHAPGRWCMRIKLEAVAWYDHVVDTVGRNGAVHAARNYLTTIRRHKRQAMRESVPQAPAGEAAIARDPVQLLPYCTSPHCKVIRDAICRNGKHPAIPRCKYVTTRADGLQRECGYFCMDELRLDLQVGSEFKTMGLTCRREPTRDILLVPVNHRINKYLLQDPKTWEAIAAFQTKYGHGCFEGIAANFGKWESRNATDSSEHAVDCHGHIHLLVSPSCMDAIANETGGSAARGRTQHPPSHAELDARDLEICRLISHEHEMLREENKMLRERNDQLQAEVCGVKA* # PASA_UPDATE: g6053.t1, single gene model update, valid-1, status:[pasa:asmbl_9124,status:12], valid-1 NODE_737_length_18297_cov_39.538 . gene 9665 10702 . + . ID=g6053;Name=g6053.t1 NODE_737_length_18297_cov_39.538 . mRNA 9665 10702 . + . ID=g6053.t1;Parent=g6053;Name=g6053.t1 NODE_737_length_18297_cov_39.538 . exon 9665 10134 . + . ID=g6053.t1.exon1;Parent=g6053.t1 NODE_737_length_18297_cov_39.538 . CDS 9665 10134 . + 0 ID=cds.g6053.t1;Parent=g6053.t1 NODE_737_length_18297_cov_39.538 . exon 10272 10702 . + . ID=g6053.t1.exon2;Parent=g6053.t1 NODE_737_length_18297_cov_39.538 . CDS 10272 10695 . + 1 ID=cds.g6053.t1;Parent=g6053.t1 NODE_737_length_18297_cov_39.538 . three_prime_UTR 10696 10702 . + . ID=g6053.t1.utr3p1;Parent=g6053.t1 #PROT g6053.t1 g6053 MASTQAAPKAMQPALYISHGGGPCFFFDAKEYPFFAGMDKHSATADFLRKLPSILPEKPRAILIVSAHWEEQAFTIGESNGGKTELLYDYYGFPEGSYNLKWAPPSSPAVAQRVRTLLEQAGLPVASQKRGLDHGVFVPLLVAFPNGDVPVVQLSLRNGLSTDEHIRLGIALAPLREEGVVIIGSGAITHNLNEIRAGSSGNSWASDFQKWVATTLGTPKGNAVYGEDVQKAMRDIMVAPGARKSHPREEHLIPLHVAYGAGVGGHVRREGESAAGCTRIHQGIVKGSFVLDAYRFD* # ORIGINAL: g6055.t1 original gene structure, not modified by PASA NODE_737_length_18297_cov_39.538 AUGUSTUS gene 14847 17868 . + . ID=g6055;Name=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS mRNA 14847 17868 . + . ID=g6055.t1;Parent=g6055;Name=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 14847 15089 . + . ID=g6055.t1.exon1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 14847 15089 . + 0 ID=cds.g6055.t1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 15558 15695 . + . ID=g6055.t1.exon2;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 15558 15695 . + 0 ID=cds.g6055.t1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 16075 16174 . + . ID=g6055.t1.exon3;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 16075 16174 . + 0 ID=cds.g6055.t1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 16499 16616 . + . ID=g6055.t1.exon4;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 16499 16616 . + 2 ID=cds.g6055.t1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 17127 17241 . + . ID=g6055.t1.exon5;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 17127 17241 . + 1 ID=cds.g6055.t1;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 17686 17868 . + . ID=g6055.t1.exon6;Parent=g6055.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 17686 17868 . + 0 ID=cds.g6055.t1;Parent=g6055.t1 #PROT g6055.t1 g6055 MAPLVVARGARVSAGATMTMCVFAAVSCALIASALGGTIDDHVTPAWYNNAKFGILVTWGTFSVPAYAPLTGTSADILKEHGWSYFFNHNPYAAWYANSIKISGTDAQKYHDATYGAGYPYENFRAEFNVQNTDANPQDWADLIVAAGAKYGIMVAKHHEGYCLWPSTVQHPHCSDCFSPRDFVGEFATAVKNRNLELGIYYSGGYDWSVNNYTFTNFLDLDLGIPQASTYVEYLDAQWRELVSVYKPSILWNDMSSPLYWNKNGFVLNYYDAFPEGCINDRFSDFLQDTQITFFHHG* # ORIGINAL: g6051.t1 original gene structure, not modified by PASA NODE_737_length_18297_cov_39.538 AUGUSTUS gene 118 3029 . - . ID=g6051;Name=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS mRNA 118 3029 . - . ID=g6051.t1;Parent=g6051;Name=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 2913 3029 . - . ID=g6051.t1.exon1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 2913 3029 . - 0 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 2642 2785 . - . ID=g6051.t1.exon2;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 2642 2785 . - 0 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 2234 2360 . - . ID=g6051.t1.exon3;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 2234 2360 . - 0 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 1460 1884 . - . ID=g6051.t1.exon4;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 1460 1884 . - 2 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 1232 1331 . - . ID=g6051.t1.exon5;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 1232 1331 . - 0 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 857 999 . - . ID=g6051.t1.exon6;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 857 999 . - 2 ID=cds.g6051.t1;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS exon 118 439 . - . ID=g6051.t1.exon7;Parent=g6051.t1 NODE_737_length_18297_cov_39.538 AUGUSTUS CDS 118 439 . - 0 ID=cds.g6051.t1;Parent=g6051.t1 #PROT g6051.t1 g6051 MDSALSSKSSSTLAASMEGSLLQMLATIQKGIQDLENDRLEFERRTAEQRESIEREREEFSRQMDEERRRFAEEMEAERLRSQMESQTIEAAVVPLDDRIKLNVGGLIYHTSRRTLTRHPDTMLAAMFSGRFNLEVDSDGCYFIDRNGEPFKYILAYLRTDSADFSVPSDMVADVISEAEYYLLFDLCRALGRNDRWFEHVDDPSKMTPTDYERLNSIRLRDESLSARQSQIAASLSDVDGTLRVRIELQRRSENLTRRGWQLAQAERVLECKRAFVSLVPGSLVILLQRRTGERSLVLVDADKAEPVYLPDVYGGFLAGFKTMAMHGGKIVAVSASGRLSQFDILTHAVVEVAQADRSASPPISHPHHHQHHHHLHSATHPIRSVLRSSSMPSDARMGLSPSNSGIISPLRQTFDAPTGGGGASAVLDMMEGSSEFVPCHLVTCGGCLVILANSSSGS # ORIGINAL: g2252.t1 original gene structure, not modified by PASA NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS gene 249 2037 . + . ID=g2252;Name=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS mRNA 249 2037 . + . ID=g2252.t1;Parent=g2252;Name=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS exon 249 413 . + . ID=g2252.t1.exon1;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS CDS 249 413 . + 0 ID=cds.g2252.t1;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS exon 525 696 . + . ID=g2252.t1.exon2;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS CDS 525 696 . + 0 ID=cds.g2252.t1;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS exon 896 1390 . + . ID=g2252.t1.exon3;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS CDS 896 1390 . + 2 ID=cds.g2252.t1;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS exon 1535 1744 . + . ID=g2252.t1.exon4;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS CDS 1535 1744 . + 2 ID=cds.g2252.t1;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS exon 1880 2037 . + . ID=g2252.t1.exon5;Parent=g2252.t1 NODE_4198_length_2037_cov_23.3507_potentialcontaminant AUGUSTUS CDS 1880 2037 . + 2 ID=cds.g2252.t1;Parent=g2252.t1 #PROT g2252.t1 g2252 MLVGEDTGRTDDNGDPIYEDVDHCVQRDVGTWVDNALSPLDIDFDSTYVFDDTYKAKSFPIRVRLLDHEPGDSSSYSEMISFTIFANTLTMPMSTVQKTYTFTDVPSSSLTYSYSVGCNTNYYGSDCKKFCSSSTNCSSNGVCTADGNACSCYSSYYGANCKTFCSSYSTCSSRGSCTANGTACTCNTNYYDYDCSKYCIASTTCSSHGSCAANGTCICNADYYGPSCSKFCSANQTCGGHGTCKSAGDCVCSGNFSLTATPACSNCKSLFYGSTCQSCLCPSSRGACKDTILGDGLCRTCKNDTLATPLCTPCECSVGGKCSSGPTGTGKCLYCNAANLYGEKCDKVRTCGVKGQWVGGINQTVGTCSSCSTGYWGPNCDKNCTCVKGKCDANTGLCID # PASA_UPDATE: g3401.t1, single gene model update, valid-1, status:[pasa:asmbl_4459,status:12], valid-1 NODE_2504_length_6051_cov_41.4938 . gene 4694 6028 . + . ID=g3401;Name=g3401.t1 NODE_2504_length_6051_cov_41.4938 . mRNA 4694 6028 . + . ID=g3401.t1;Parent=g3401;Name=g3401.t1 NODE_2504_length_6051_cov_41.4938 . exon 4694 4894 . + . ID=g3401.t1.exon1;Parent=g3401.t1 NODE_2504_length_6051_cov_41.4938 . CDS 4694 4894 . + 0 ID=cds.g3401.t1;Parent=g3401.t1 NODE_2504_length_6051_cov_41.4938 . exon 5489 6028 . + . ID=g3401.t1.exon2;Parent=g3401.t1 NODE_2504_length_6051_cov_41.4938 . CDS 5489 6028 . + 0 ID=cds.g3401.t1;Parent=g3401.t1;3_prime_partial=true #PROT g3401.t1 g3401 MCRSGWKGTLCDFIVAPSAPILTSINGSGHEVVLAWTHVEDQTGATKEWLPWKYAIERLGCPGLIFPLLWTEDTTSSSIVWTRIYRNASMLFEGHITNSFIDTDVTRGFTYYYEVDSRNSFGTSSRSASVSATAIDFTGPVTTATVPNPDPPIVQSGSSSGLAVGAAVGAVVGTLSLVVVVGYFVWRHKKQKKQRDAIRETDLIDMVVRRPEIIELQVSESCVRMGRRVGEGVCVCVCVCVCVCVCV # ORIGINAL: g3400.t1 original gene structure, not modified by PASA NODE_2504_length_6051_cov_41.4938 AUGUSTUS gene 1214 1738 . + . ID=g3400;Name=g3400.t1 NODE_2504_length_6051_cov_41.4938 AUGUSTUS mRNA 1214 1738 . + . ID=g3400.t1;Parent=g3400;Name=g3400.t1 NODE_2504_length_6051_cov_41.4938 AUGUSTUS exon 1214 1738 . + . ID=g3400.t1.exon1;Parent=g3400.t1 NODE_2504_length_6051_cov_41.4938 AUGUSTUS CDS 1214 1738 . + 0 ID=cds.g3400.t1;Parent=g3400.t1 #PROT g3400.t1 g3400 MGHSPIQSDVKFNFQKTGYVVELWVAIPQYFAIETSVNVFQLSGAPSAGGKITVTGNATAARLVVTCSIKATVADQLFTDTSVEVPVLKGAGYHIVVTFSNVTLSYITMSMSTVSSGAHFKVGKRLQQRPILISWLGACQRHQSSLSMSLPFILTNLARPPFCLTIVAGRRDCA* # ORIGINAL: g5835.t1 original gene structure, not modified by PASA NODE_3638_length_3068_cov_66.8386 AUGUSTUS gene 2081 2712 . + . ID=g5835;Name=g5835.t1 NODE_3638_length_3068_cov_66.8386 AUGUSTUS mRNA 2081 2712 . + . ID=g5835.t1;Parent=g5835;Name=g5835.t1 NODE_3638_length_3068_cov_66.8386 AUGUSTUS exon 2081 2220 . + . ID=g5835.t1.exon1;Parent=g5835.t1 NODE_3638_length_3068_cov_66.8386 AUGUSTUS CDS 2081 2220 . + 0 ID=cds.g5835.t1;Parent=g5835.t1 NODE_3638_length_3068_cov_66.8386 AUGUSTUS exon 2406 2712 . + . ID=g5835.t1.exon2;Parent=g5835.t1 NODE_3638_length_3068_cov_66.8386 AUGUSTUS CDS 2406 2712 . + 1 ID=cds.g5835.t1;Parent=g5835.t1 #PROT g5835.t1 g5835 MVSSVLVTANGHGIIVSVSAKCAELFGYSPKEIIGQNLTILMPRPYSDLHDKFVERFRKTGETRIIGSSRILDGLHKDGTILSIRLAVSHVPLDDDHLFVGLIEKVEDSFAKLSVDTNGIILSVNNKCVEMFGWVLNVLYHFSYSVAH* # ORIGINAL: g2093.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 16736 17905 . + . ID=g2093;Name=g2093.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 16736 17905 . + . ID=g2093.t1;Parent=g2093;Name=g2093.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 16736 17905 . + . ID=g2093.t1.exon1;Parent=g2093.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 16736 17905 . + 0 ID=cds.g2093.t1;Parent=g2093.t1 #PROT g2093.t1 g2093 MSLPPSENRRVCGFVWNEKYMWHDTGTAMGLVPAGLCEDRGLYCQPYRHFENAETKRRFYSLIDVCGLLDKTVPIKARAAEISEVGRYHTQKYIDRVKELSNGNGGDAGECAPVGRGSYEIALLAVGGAIEATDAVLRGNVTNAYVLCRPPGHHAESDIGRGFSLFNNVALAAMHAIESRGIKRVAIIDWDVHHGNGTERAFYARDDVLFVSLHQDNLFPANSGRLEHVGEGMGVNFNINVPLPPGSGIAVYEAAFKRIVLRAFRAYRPELIFVSCGFDAAALDPLSHQMLPSETYGWMTESILSLAESLPECGGRVIMVHEGGYSAEYSPFCGLKVIESLTQTKANVVDVFGDEIKSYAYQYDVLPHQELAICNAEAIVEKMEHVIAV* # ORIGINAL: g2092.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 16124 16603 . - . ID=g2092;Name=g2092.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 16124 16603 . - . ID=g2092.t1;Parent=g2092;Name=g2092.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 16124 16603 . - . ID=g2092.t1.exon1;Parent=g2092.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 16124 16603 . - 0 ID=cds.g2092.t1;Parent=g2092.t1 #PROT g2092.t1 g2092 MNYNVEKTMLTRYTLKMLCARAEKIALQFGRNLLDETAECDDDAQVKWILDQISATPFPIGASFVAMAAVALHAHCERIAATKPDSHLSAIKDIGYGGKYDSNSRAIYVIVASEEEIEHVRKELRELLGELSIDGYDVQVEKEAEMKLQRACPPLTTVQ* # ORIGINAL: g2097.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 27994 30036 . + . ID=g2097;Name=g2097.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 27994 30036 . + . ID=g2097.t1;Parent=g2097;Name=g2097.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 27994 30036 . + . ID=g2097.t1.exon1;Parent=g2097.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 27994 30036 . + 0 ID=cds.g2097.t1;Parent=g2097.t1 #PROT g2097.t1 g2097 MQCQVTNSRDSPSAHTNCAYVNSAIEPTQTVVVTTPSGAKFFINAKWRQESGCQIELNGIARTWMRVSLTDTVLVENCNPQPLLSQVHVNVQFLAKRNNSNVTITDQTVHDVFADRVVTIGQTFITQLNDKTVTFTICKIADGIQTGCIGPCTIVVIATDCPNIDIAVSGQRVRTEMVAPALSFEPSWDLTKMGIGGLDREMESLFRRAFVSRLAPPQAVQKLNLRHVMGVLLHGPPGTGKTTIARAISKMLKTTEPKIVNGPEILSKWVGEAEQRIRDLFADATKDQAAHGPKSPLHVIIFDELDAVCKRRDGASGKNTDSVVNQLLANMDGVNRLSNLLIFGLTNRLDMIDDALLRPGRFEVHLEIGLPDEAGRSQILNIHASALMTNGKIAPNVDFAEIAREAKNFSGAEIEGLVRCATSHAMNRTVNYGDGNGDSQISLDPTAFADMVVKREDFVLALAELKPTPPDFELILSRQFVPWHPYLEASIGDAREWGQRFLTSRLDKFCRILHGPAFSGKTTLACHIAKQVDFTTVRMVRPDDYVGSEGDRCAALARILAEIKRCEASVLILDNVEELIGLAPGPRFLPNVLQAIITLLRTTVRHHTFVIVTSCMSRQWLEEFGIAACAHQIDQMPLINSKEQADRVLSELGQPSSDSDELYPVAIGRVLTQGFAPARQ* # ORIGINAL: g2095.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 22051 23302 . - . ID=g2095;Name=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 22051 23302 . - . ID=g2095.t1;Parent=g2095;Name=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 22932 23302 . - . ID=g2095.t1.exon1;Parent=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 22932 23302 . - 0 ID=cds.g2095.t1;Parent=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 22624 22793 . - . ID=g2095.t1.exon2;Parent=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 22624 22793 . - 1 ID=cds.g2095.t1;Parent=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 22051 22505 . - . ID=g2095.t1.exon3;Parent=g2095.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 22051 22505 . - 2 ID=cds.g2095.t1;Parent=g2095.t1 #PROT g2095.t1 g2095 MASQAPLCRPERVEDDSLENCVARLREHANKIRPEFLTLFQGAGFVVGANMTGTVKTLQEVAMGVLSAARVAESVTPFVSPVFGVVALFADIAKSMAETDGDVKQLLEYFIAIWGTTPQEGLAGDAPNVPDIDFMRAVRALESAARAIATRSSRSLGGKIWHAITKMDEIAINDCVSGNAEGGFAFCVPRPYVDSPAGDLNQQNAALAQYQHDRAREQEIMAENHRQNIAPPNPLEDLKLALFVDDPVIFINSTLLEVVAAGIWTQATLTTATTAASVTRSNARSYASIVPPGLQGLRCIAGSELVDASTVEEFLELVADKMVYPYTKYST* # ORIGINAL: g2098.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 31525 32393 . - . ID=g2098;Name=g2098.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 31525 32393 . - . ID=g2098.t1;Parent=g2098;Name=g2098.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 31821 32393 . - . ID=g2098.t1.exon1;Parent=g2098.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 31821 32393 . - 0 ID=cds.g2098.t1;Parent=g2098.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 31525 31734 . - . ID=g2098.t1.exon2;Parent=g2098.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 31525 31734 . - 0 ID=cds.g2098.t1;Parent=g2098.t1 #PROT g2098.t1 g2098 MEPQSPPHEDFPETPSSSRDAPAAISTPVTQNASSFVSASSSPATGSREPQSESALIASQRQQRLREPKFETSRTRDSSIDLSRDPDLNGPFENFELNKKHVQLLLDKTWKAVRKGALGRPKNGSPAELVTRTRFLLLSATWETFVEDMFIEAVLYLIASACTNTTTDSTVCEALHKAMKNKRIPNALYNSVNGRVRNGTLCNSEDPQEFIESAVLEYCKSHVKGMNIPNERAVRDLFRKLEIEVSFDLSVCGFINELHT* # ORIGINAL: g2099.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 35524 35880 . + . ID=g2099;Name=g2099.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 35524 35880 . + . ID=g2099.t1;Parent=g2099;Name=g2099.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 35524 35880 . + . ID=g2099.t1.exon1;Parent=g2099.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 35524 35880 . + 0 ID=cds.g2099.t1;Parent=g2099.t1 #PROT g2099.t1 g2099 MQEPRGHDSQGVPVALINDHFRLSNQCTHGHSNLGTLELVFNQIKQRNRADARTVLCEMRCVTGLAGEPLPLFDDDQSAIQHSSKLLTSISSEQAEITRILHGAEPMSRTGDVFLVAS* # ORIGINAL: g2086.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 752 2419 . - . ID=g2086;Name=g2086.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 752 2419 . - . ID=g2086.t1;Parent=g2086;Name=g2086.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 752 2419 . - . ID=g2086.t1.exon1;Parent=g2086.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 752 2419 . - 0 ID=cds.g2086.t1;Parent=g2086.t1 #PROT g2086.t1 g2086 MKSASATSFNSPPYQRMDIHELQRKIKELTIEAERARAGEAEKDRSIQEERAARAFEAERARAGEAEKDREIQAAKDEADKARAYALVPAGVRIDDAKSVARNGLPPLAGPPTTASTSARDNHATANFVNRDFGVFHDLPLRHVVSRIWTTSNNSVLHWASEATLQSHVEEVLKDVLKAVGLNDVRCEREMGFFRLRSDMWVVAVDFVPIGVVEVKRPARESESCLANSTVLGQVFNYMYSMRSLYNVNHIFGIVTTYNEWRFCWLDDDADEFAASTTPLPLTPEAPRVAVSPYSAAAVWNEIDAALPAASPAQPADQLDPPNAEPIVVAVNRELHVSRIFTREDPLLVRAIASVLWKMNTSPRTEMRPLVFEDKTYIHLGDEAISFVRAKRLVSVGSLKCRIPRKDCSRYLLLRDLRGGAHGRVWLACSLFGALCVLKFPVDDATLYRELDVWTKVFPNAGARVQKVCGRSALLMPFLRPCARDAQTIKAVKRAVRRCANAGFEHDDLDWRHVGFYQPSASSGQVMLFDFGAVSAAKSPKTAFEAMCRKLGLAF* # ORIGINAL: g2094.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 20184 21341 . + . ID=g2094;Name=g2094.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 20184 21341 . + . ID=g2094.t1;Parent=g2094;Name=g2094.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 20184 21341 . + . ID=g2094.t1.exon1;Parent=g2094.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 20184 21341 . + 0 ID=cds.g2094.t1;Parent=g2094.t1 #PROT g2094.t1 g2094 MPPSSPAPPLSDCILVDSSITTRRRNVVHPVCYALECNRAQSGQDAVTSPVRTQLAKYLPVDNAAYANSVDLVYCVDIRSDCEELWDMRKTFPLENVDVLHDLTLLVEAHTDSVDLGYTLIRRFELLSGDTVLFSITGAQLLQHRKLFGECGDADYDSREIVPLTRVFDLENSPLPGHGYNLAARITFCKKSDCGTLARIALHARASFLSKEERRKQLTVETTSVIGRLFGRTVGRTHVLQHRHFCSKTVNADGLTDVQIMLGNDFEGLMFSELAVVSEACDILGVMLVNDGAILFRDEQDYSRVETGRRYLGRKSALPKNVLVHPFGFEQMSAGPLMGSMQVIVHLDGAPAVNRVHVMARQWKKLQMSVPPLATGSAVPHIVFI* # ORIGINAL: g2091.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 12301 13593 . - . ID=g2091;Name=g2091.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 12301 13593 . - . ID=g2091.t1;Parent=g2091;Name=g2091.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 12301 13593 . - . ID=g2091.t1.exon1;Parent=g2091.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 12301 13593 . - 0 ID=cds.g2091.t1;Parent=g2091.t1 #PROT g2091.t1 g2091 MKCDVQIIQKNGLHVMFVPAKTPTVHIRFDMLNGWGIETADTLEYTHFLEHLQSCFTSKKYKTAGKVLDILKTRGVEFNAFTSAYTSGYYLTCMPEDAMVCLDILLNMVFHFRVDEAVFDNEKHAVIREITHNMTRLGYEAIHQIHKTFSSLPAEHAHIKEHITSIKRATPAALMKFRKRTTNLDHALLTICGLDRSLERSAINLMKEFERNAALFGKIEFPQSVPIEPGETLIEIPSESSEVSLIYFMVPVANLITPAQNDALQVGIQAFGGRGLYSRLMTKLRRAHGSVYNVEAGFDYNPMDDAKQYVLIHTQTYPNKTKAVIRVIKKEWETLCRDGLTVEEFEAAKQKMSVDQLNRSDAVASVQDKLTNIVQGYLFEKKLSKRLPSAKTIIRQIESIRLEDVNETLAALAPAACIVYRHGPPRHHGA* # ORIGINAL: g2103.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 50444 51310 . + . ID=g2103;Name=g2103.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 50444 51310 . + . ID=g2103.t1;Parent=g2103;Name=g2103.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 50444 51310 . + . ID=g2103.t1.exon1;Parent=g2103.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 50444 51310 . + 0 ID=cds.g2103.t1;Parent=g2103.t1 #PROT g2103.t1 g2103 MSDLAEKKKRGRKPKSVTLSETTAKPSIVLDAVSILQPASHAEAENATVILFLPIKTVPAPVSDLNGPAVTQLNRTLTFEPKREQTDAELMFRLKEGKIVKTINPLFSTDGSPVEWPAKCSLCCWWDCHPFDTIPFCLPDKVVNGIYHVFGCFCSPQCALAYQIDKSTGYKMWEACSLITNLYEDLTDTVCGGISPALPRECLKSFSGNGQGTLTIEEYRAACTTTLRCRVSMPPICPLNVTLEYFDSKKFKGITQTDPKGKANENKLLSMVKILGGDKLSPLPPSRV* # ORIGINAL: g2100.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 36998 41848 . - . ID=g2100;Name=g2100.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 36998 41848 . - . ID=g2100.t1;Parent=g2100;Name=g2100.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 36998 41848 . - . ID=g2100.t1.exon1;Parent=g2100.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 36998 41848 . - 0 ID=cds.g2100.t1;Parent=g2100.t1 #PROT g2100.t1 g2100 MSEARVERPKFGGQASEKLSVFQRRWALYEEGLRRPLTDRQRAMGLMEACDANITARVSTIVAQLFAVSKDLDVGPMDSPALVRIAMWSEYGIVARALEVRDAAERPSFATQFDRVGAKATEASLEWLEEVMATLAPTVAARLLVDKGLKTANSLKIEADDDESVGRYRQWLADAHGNRAAEFVRALIHTMSNPIVHMAHAAYPKTFLKELSEVYNALRHFIVTRFGKTTFGLNLLTKYLELGGVEEAIVLLRQARDGGQLDAIFGRGGGKTKTGSEESAVTITTTEKPRSGGGSRSTGGQGNGGNTRSQMAAKGNEYTGGGGSKKETSASTDKSAGGVRRCFKCESPDHMLRDCPLVKGRGNATVAAMAATEREGVGSPPIGGTPALISDSDAGDDGNYPRGWMQRGTFLVGGVARRGHVQTLFDSGAATCAVSHTACRRFKIPYGMVSKESVDDTTFQGIGGSFVQAIGRIAEDVELSIASFGKISMRGVRVFEDLPGSTDVLLGYGRLIKMGVLKGPEVAAAMERTRGATFADIAGEALAKGRDDPIGVDDAVLSVWLPEGERTTVTREDFSHLMAAGIPIAKVDEVVTAINERGWRDGARLGMAFPPAELKLKEGAPPARISYPLRSPEKRTALRADIEKALQGGLIRRLTKEEARRVRYVTVPSLAPKPDGTYRTAIDYRNINKFIVVGERTEIPREEEFLSRLAESSVFSVMDAVKGYWQLRLSVEAQLLTAFLDTSTDDGAVYVWLVLPFGITNAGDLFQDAMTRCLRETRATAYIDDIGVGSKSYAQHVEDILEVMAALRKRNVFLRIAKCQFFKNEVIALGRQVSAAGVTVPAKAMQGIRDLAVPKSRDDVRSVYQALTWWARFVPNFAIMGAPISDLLKGGRRFKWGPEQQAAYDAIKEAICASRPALPPDYTHPMVLVTDASRVGVGAVLYRTDDGERRMVACASSKWSAAEANYRHVGELEALGIVWGALKFEPYLMGVAHPFIIETDHQPLVSLFGGIGRISSSVTRRRILRWAEILAQFNFRIRHVPGSAMGVTDTLSRLPSTHDVLLERRSAAVVAAILDTDGEVMTAGNVTASEKANAGTAAQPLMGERDKRQRAIEGLVRIIHEQLSHAGTARVEAHVRARYSDWDDVRNIVRMVVRTCHACQIAGDAREREAIMPLRPLPIVTRPMARIAIDLLSLVRSTGGARYVFGAQDAATKFVWLVPMTSKASEDIVLVFMASVIPWGIPVHVHHDAGSEFDNDVFASFCKDYAIERHVTSVDRPQANGQAERVFSTVTDWMRKDMAHHQTERWEFSVARVAKAYNNSVNSTTGKTPFELMRGELPQLPVDRQIGWKPPIRFVDEIGLRTRLTVAQETQRIAADSRVTVTEAPTYAKGDLVMVRVRSGERKNKMAARWSGPFPVDKYVDPDKYEVRTGRRCTTVHVTDLKHYKVPPAATSDKVESKEMAATTAPGDVLTIPASADAPDRTIRMAGTAAFTTWVWAHPWVARADPGDVTRTRAALSTKAGRDFTYALGSPLRGWFAYCGSIGRDTTTSPSSGEMDTWIVCEGGLDSTKSQMRYAVRRAYRFVHEPEFRHVQVSRLLGRAAGQDSATRDEQSRDRR* # ORIGINAL: g2096.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 23809 27090 . + . ID=g2096;Name=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 23809 27090 . + . ID=g2096.t1;Parent=g2096;Name=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 23809 24585 . + . ID=g2096.t1.exon1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 23809 24585 . + 0 ID=cds.g2096.t1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 24715 25082 . + . ID=g2096.t1.exon2;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 24715 25082 . + 0 ID=cds.g2096.t1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 25328 25880 . + . ID=g2096.t1.exon3;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 25328 25880 . + 1 ID=cds.g2096.t1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 26074 26205 . + . ID=g2096.t1.exon4;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 26074 26205 . + 0 ID=cds.g2096.t1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 26422 26666 . + . ID=g2096.t1.exon5;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 26422 26666 . + 0 ID=cds.g2096.t1;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 26949 27090 . + . ID=g2096.t1.exon6;Parent=g2096.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 26949 27090 . + 1 ID=cds.g2096.t1;Parent=g2096.t1 #PROT g2096.t1 g2096 MATEKADAESAGVHGAFGKSEFARPFLDFIDNVRANVGAELAKEIKLPSICVVGAQSSGKSALLQSLSGIKLPSGIGMVTKMALMLQIRELDTANCNEEYAEISVPKHDTHGKTLRISTNEVADKVASITKDVVKDKHIEKELIITVTVYRRGQVCELTLIDLPGLTHAEEYYKDVKEMVENYTRQTECVMLVVVNASTDVDASEAPQLARTHDPDGSRTVTVLTQCDLLGNDETRMAGIGRTLGAANATGGSKGEMFAIVNTTKAAGTQTSDIQQADSFFEKEVFQPSAVREKCGLINLVQHLERIQSEQIRRVLPETFRRLIEAKEIAEEELLALPAVFTNDTERVAFVQAKFRDLADLLKSLTTGFAIDSTYSSANKISALKINKHINKTNEWFEMVVRKQYSGRHFFSNGMFTKMKQCSAEMRSTELPNVISNAAFVSVFQEEFSWLAATAVNRPRQTTSALATEADGPCYRLLKKRVVFLREFLPAVVDMCAMDDFPALRNRTCKLLTDLLQLRIKDVKRQLAEYLSQEQQMPFTLNHYFMNTVDKIRKTWQDLKATHDRELQQQHDVTMRPRKLFKVNDEVYEEPESSLYGAKTNEEQAAIDMLINMQAYCKVMMKRVVDIVPMMLRDHLVVRLEKEVKAALDMMVTNERDDIITFLTKETSDVASRRTRATARIERIDFVLGLASGHQYLKDMLAAAASNTDATGAYGIDDCDESDESKDELDGSKGFGLF* # PASA_UPDATE: g2101.t1, single gene model update, valid-1, status:[pasa:asmbl_7090,status:12],[pasa:asmbl_7092,status:12], valid-1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . gene 43042 44318 . + . ID=g2101;Name=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . mRNA 43042 44318 . + . ID=g2101.t1;Parent=g2101;Name=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . five_prime_UTR 43042 43183 . + . ID=g2101.t1.utr5p1;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . five_prime_UTR 43597 43680 . + . ID=g2101.t1.utr5p2;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . exon 43042 43183 . + . ID=g2101.t1.exon1;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . exon 43597 43758 . + . ID=g2101.t1.exon2;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . CDS 43681 43758 . + 0 ID=cds.g2101.t1;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . exon 43858 44318 . + . ID=g2101.t1.exon3;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . CDS 43858 44271 . + 0 ID=cds.g2101.t1;Parent=g2101.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant . three_prime_UTR 44272 44318 . + . ID=g2101.t1.utr3p1;Parent=g2101.t1 #PROT g2101.t1 g2101 MMEDSDGGVPRKKPNNDESRNNDFQECVKSVTPDALAERLQLCWASVNAELKAARSAKKRKDEWFKEMKAEKDARFAEMKAEKDARFAEMKAEKDAQIMENDARLAEKDKLIAALEEARMLSIAEKDRIISNLTRTVLGVSDYYQREGLWPPREPNVVKALRK* # ORIGINAL: g2087.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 3553 4020 . - . ID=g2087;Name=g2087.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 3553 4020 . - . ID=g2087.t1;Parent=g2087;Name=g2087.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 3553 4020 . - . ID=g2087.t1.exon1;Parent=g2087.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 3553 4020 . - 0 ID=cds.g2087.t1;Parent=g2087.t1 #PROT g2087.t1 g2087 MAISTDSRLHNRKLNKDVANLAIQTAELVKQNAELRKRTVAIQLRTLVEKMRFELVKKIGPLRIEGWSSWDDVSNKKVAYRYLGAPRADEEMKLHIETELRQAFADLYGSLISNCDEHSTAQWAAIHESQCSDAEHSTAQWADAIHESQCSXXXS* # ORIGINAL: g2088.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 5702 6277 . + . ID=g2088;Name=g2088.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 5702 6277 . + . ID=g2088.t1;Parent=g2088;Name=g2088.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 5702 6277 . + . ID=g2088.t1.exon1;Parent=g2088.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 5702 6277 . + 0 ID=cds.g2088.t1;Parent=g2088.t1 #PROT g2088.t1 g2088 MTQAVRNAYKAVLWNHSRHEMPPPVSDPWVVTVALKDVIDLMTANGSPVENVTVSTFKKIAKAQYDYRPSNRGKHLAAAKHRYHERRLSHPGRRAKYATDDEIDENNATTDSDSSARDGLSDDCLSDFTDEDVRADLFAIAHPNSPDIWDMDVVEDLPALSQQTAMEECVPLTYSQCEDLMTDCDPTAFDF* # ORIGINAL: g2089.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 7400 8563 . + . ID=g2089;Name=g2089.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 7400 8563 . + . ID=g2089.t1;Parent=g2089;Name=g2089.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 7400 8563 . + . ID=g2089.t1.exon1;Parent=g2089.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 7400 8563 . + 0 ID=cds.g2089.t1;Parent=g2089.t1 #PROT g2089.t1 g2089 MATMESKYYNAEVYEYGNTWKIFAYRIGQVHSASGLLCTIHADPTQALTWKSVKAWALNETKGDFFDKSPHTDAFDLYHEMTRLADDDEVPVGLAKTSFVVVLIPRCSTLFSWYAQREETLQAAIVEAKRSGPEHQDEDVFREYLQDHLPKMLDVGKWTISPKILIFSQLKNTEFACIVLPDWSAGVLPETGGDVKFFEKDFVVVHSRAFRYRSLGRQPSVSLASPNAPATPSLSSGWSSADLVVPGAIVAHIEMKVIKSKRQKSPLNEAIGQLKTGIEEKQEMMGQPGTWRFVGPVSGRLRVVLLVLDPLPSVSEVDKLVRGTRGGRIDFTGVDIIMVLGVACFARVGCAREGMIVIPHCGASLAMLDAGISERIEANPAHLTRFL* # ORIGINAL: g2102.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 45557 46522 . - . ID=g2102;Name=g2102.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 45557 46522 . - . ID=g2102.t1;Parent=g2102;Name=g2102.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 45557 46522 . - . ID=g2102.t1.exon1;Parent=g2102.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 45557 46522 . - 0 ID=cds.g2102.t1;Parent=g2102.t1 #PROT g2102.t1 g2102 MPTESAFKVKVQKSKKTFTETVTRTNPNTQDGRDQPASQGARGYTSNALVSRGETRDYPGNHALVARGETRDNTALVSRGETRDYTRNPALVARGETRLAKLLPAGILEVVNRWEPEQTSDKKQLKRLAENANDFESLTDLAKGLMVAIINEESEQGKAGRSDSGRMTMRIPRQSQFEQVTSSLRQLFDEIKTVSEALNRRDYETDRRLRTKTYNRIRASLAEAIFRETDTRITKKALLKAVQKISTFDDVQPVEQLEDLAKQATSLRELMLTYRVSSKFPTDPHAPNAKHFDVIAGEHGLVVKPAFFSMDGRLLQMGSIL* # ORIGINAL: g2090.t1 original gene structure, not modified by PASA NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS gene 9594 11051 . + . ID=g2090;Name=g2090.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS mRNA 9594 11051 . + . ID=g2090.t1;Parent=g2090;Name=g2090.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS exon 9594 11051 . + . ID=g2090.t1.exon1;Parent=g2090.t1 NODE_41_length_53837_cov_24.4832_potentialcontaminant AUGUSTUS CDS 9594 11051 . + 0 ID=cds.g2090.t1;Parent=g2090.t1 #PROT g2090.t1 g2090 MLSNDLLIELFAELRAADAVAFAVSARWLFKQYIGDVNYIEFRRWKNQLKKNEIQPDVNKEARDGNLQRVKYLLNNVKAQCTTGAMDKAAEYGHIAVVEWLSANRKEGCTTAAMDFAAINGHLDVVEWLSANREEGCTTKAMDWAASNGHLGVVEWLSKHRNEGCTTDAMNWAARNGHLPIVEWLSANRKEGCTTYAMDMAACNGHLAVVEWLSAYRIALNRPEDGAIHELQCSEPGCTTYAMDLAARNGHLAIVKWLNANRKEGCTTNAMDWAASKGHLAVVEWLNANRKEGCTTHAMDRAAKNGHLAVVEWLSANRVGRALNRPEDNAIHKLQCSESHCTTNAMDWAASNGHLGVVEWLSKHRNEGCTTNAMDLAARNGHFAVVVWLNANRKEGCTTNALDWAAGNGHLAIVKWLNANRKEGCTANAMNEAARNGHLAVVEWLSTNCKEGSPTNAMYWAAGNGHLAVVEWLRTNRKLRVGLWR* # ORIGINAL: g12261.t1 original gene structure, not modified by PASA NODE_881_length_16310_cov_43.3063 AUGUSTUS gene 2786 5232 . - . ID=g12261;Name=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS mRNA 2786 5232 . - . ID=g12261.t1;Parent=g12261;Name=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 5059 5232 . - . ID=g12261.t1.exon1;Parent=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 5059 5232 . - 0 ID=cds.g12261.t1;Parent=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 3467 4930 . - . ID=g12261.t1.exon2;Parent=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 3467 4930 . - 0 ID=cds.g12261.t1;Parent=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 2786 3358 . - . ID=g12261.t1.exon3;Parent=g12261.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 2786 3358 . - 0 ID=cds.g12261.t1;Parent=g12261.t1 #PROT g12261.t1 g12261 MFMTFLQTNGDSEAISFLDLTKASSIHSVIPGSVPKKHHVNTAFDVEIELRTYHFLSETPEEAQKWVQGLDLVRQYYMSAPLRLNSVVSYSSYDTRSIADDASEDYVLESEVFIHGPEPLPTIRESLSYDDGPLADLVKALPRAVHRRSKSVDASVKAGVAAEELSGQLSASLQVLQGVDGAPRPRSSAIRPRSEVCRPPVSYADAIPSPSPDGHSRIQWSLSCSPGSESNKSGAEREVDDVTVSQLADTLRRPSTIPDMTDSLAQAAATHDGDSRAALHGSEDEDNVWWGGCARRDTSDRDVRLDPFQLQLNGVPTMSRPSAMADDALLGHSGPDRLLLAQRSDSRPGSGPGSRPGSRPGSRSQSPRRTLAHSRSIEFGSTEVLNQSGDGTGWFQSTASSLEEDRLLTAASPPKHTLTEEHVRWQGLRDKAHVDGAKRALRPPASPPTVTEREARKFIEDEVLRERRRVMESLSNPRIDMTRGPLAVSSPAALKVLLQVRPGDVSGAKAGVMLPAVSLSGTVLMYDGRQWRVAEGSKHELPPDHVVASAADAYEIPGGIVAIFDKEGKRWYTCPIEQLRSPFRPPLPVVPQGSPRMRVDLSSFDNGHTGSNYAKCRHPSLAEEDDDILNSPLLPAMSVSGMPVPRPLESFWDIAKLAEPAKETFAAHEPRKSTVASPTHTSREENAIWHSHTKLDTLPPPTLPRKPSVDDAGTNPLTDINSAHAGKVLIEVWAAN* # ORIGINAL: g12263.t1 original gene structure, not modified by PASA NODE_881_length_16310_cov_43.3063 AUGUSTUS gene 10763 13951 . - . ID=g12263;Name=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS mRNA 10763 13951 . - . ID=g12263.t1;Parent=g12263;Name=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 13661 13951 . - . ID=g12263.t1.exon1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 13661 13951 . - 0 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 13121 13154 . - . ID=g12263.t1.exon2;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 13121 13154 . - 0 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 12815 12945 . - . ID=g12263.t1.exon3;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 12815 12945 . - 2 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 12526 12627 . - . ID=g12263.t1.exon4;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 12526 12627 . - 0 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 12225 12357 . - . ID=g12263.t1.exon5;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 12225 12357 . - 0 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 11880 12030 . - . ID=g12263.t1.exon6;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 11880 12030 . - 2 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 11595 11740 . - . ID=g12263.t1.exon7;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 11595 11740 . - 1 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 11131 11480 . - . ID=g12263.t1.exon8;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 11131 11480 . - 2 ID=cds.g12263.t1;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 10763 10807 . - . ID=g12263.t1.exon9;Parent=g12263.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 10763 10807 . - 0 ID=cds.g12263.t1;Parent=g12263.t1 #PROT g12263.t1 g12263 MEGAGPPDGDANHVAVEMVAVPPLVRNNDTAAPPTPQTHSPQSQAGLLNASLNENATEDGRRDNGPSDALPLGAQTNFKGPITVEFENVSYAVKDTVPRELTALIGPSGAGKTILLDVLSGRRHGGHIEGSIHFNGQPFVKALRTEIGFVEQRDVLLAWLTVRETFMYTARLKYPAAVPKAELKRKVEDVIDKLALNICADNIIRTPPALGISGGQAKRTNIGIELITSPKILFLDEPTTGLDSATSVEVVKVLRHLAEGNMTIVATIRQPSKNAFAMFDRPIDSTYVHRLMMLVDGRIAYYGNIGDVLGYFAALGYTCPPKENPAEFLVNLTDPRAPPVEGQVRAPPGFFAERYETSVMRGDRLESIADTDRGRQAVLEGLHGGKFEPRAEAAEKQTFANTAWRNAIILTQRLALQKRRNNLYIVARITRVVFLGFVLATLFHSQFKGASTARAVDSSF* # PASA_UPDATE: g12262.t1, single gene model update, valid-1, status:[pasa:asmbl_9815,status:3], valid-1 NODE_881_length_16310_cov_43.3063 . gene 6417 8687 . + . ID=g12262;Name=g12262.t1 NODE_881_length_16310_cov_43.3063 . mRNA 6417 8687 . + . ID=g12262.t1;Parent=g12262;Name=g12262.t1 NODE_881_length_16310_cov_43.3063 . five_prime_UTR 6417 6478 . + . ID=g12262.t1.utr5p1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 6417 6554 . + . ID=g12262.t1.exon1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 6479 6554 . + 0 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 6648 6733 . + . ID=g12262.t1.exon2;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 6648 6733 . + 2 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 6824 6941 . + . ID=g12262.t1.exon3;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 6824 6941 . + 0 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 7181 7308 . + . ID=g12262.t1.exon4;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 7181 7308 . + 2 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 7489 7588 . + . ID=g12262.t1.exon5;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 7489 7588 . + 0 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 7807 7911 . + . ID=g12262.t1.exon6;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 7807 7911 . + 2 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 7991 8110 . + . ID=g12262.t1.exon7;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 7991 8110 . + 2 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 8214 8281 . + . ID=g12262.t1.exon8;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 8214 8281 . + 2 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . exon 8411 8687 . + . ID=g12262.t1.exon9;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . CDS 8411 8476 . + 0 ID=cds.g12262.t1;Parent=g12262.t1 NODE_881_length_16310_cov_43.3063 . three_prime_UTR 8477 8687 . + . ID=g12262.t1.utr3p1;Parent=g12262.t1 #PROT g12262.t1 g12262 MFAASLIRALRPQAYSVSRTFATTSEGAATFQHLLVSKKGQNGSVGFIQLNRPKALNALCNDLMRELNIALHAFEADATVGAIVLTGSEKAFAAGADIKEMQAMSFSDCIRTNFLAHWTNVADSRKPILAAVNGYALGGGCELAMMCDIIYAGEHAKFGQPEINLGTIPGAGGTQRLVRAIGKSRAMELVLTGEQLDAQEAERKGLVARVYPADKLVDEVVKKAEKIASLSKPVVAVAKECVNAAYEMTLREANHFERRMFHATFALDDRKEGMTAFVEKRKPNFKDC* # ORIGINAL: g12264.t1 original gene structure, not modified by PASA NODE_881_length_16310_cov_43.3063 AUGUSTUS gene 15239 16120 . + . ID=g12264;Name=g12264.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS mRNA 15239 16120 . + . ID=g12264.t1;Parent=g12264;Name=g12264.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 15239 15325 . + . ID=g12264.t1.exon1;Parent=g12264.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 15239 15325 . + 0 ID=cds.g12264.t1;Parent=g12264.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 15812 16120 . + . ID=g12264.t1.exon2;Parent=g12264.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 15812 16120 . + 0 ID=cds.g12264.t1;Parent=g12264.t1 #PROT g12264.t1 g12264 MDNAPGRVATADPDANELSLGHGSEGASTASSPVVAALDALSESGHDNLHAEVGEPVEADSNVSRPDGSAKPTADAIINRLDDNGRITITFENLSYCVPVRRSLKDRLCCRGRGKGDKQILRNLTGAIKVS* # ORIGINAL: g12260.t1 original gene structure, not modified by PASA NODE_881_length_16310_cov_43.3063 AUGUSTUS gene 472 944 . - . ID=g12260;Name=g12260.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS mRNA 472 944 . - . ID=g12260.t1;Parent=g12260;Name=g12260.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 905 944 . - . ID=g12260.t1.exon1;Parent=g12260.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 905 944 . - 0 ID=cds.g12260.t1;Parent=g12260.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS exon 472 755 . - . ID=g12260.t1.exon2;Parent=g12260.t1 NODE_881_length_16310_cov_43.3063 AUGUSTUS CDS 472 755 . - 2 ID=cds.g12260.t1;Parent=g12260.t1 #PROT g12260.t1 g12260 MDGLRWMKEKQLLALPGADAAVAAGYTDMVVYMMDVNARAVPVRNGALHPKVLHPVKHPFNLSNALVCAGRYALARMIDSRLPGLRASLSDLLCRALPTVAAVPLGD* # PASA_UPDATE: g1645.t1, single gene model update, valid-1, status:[pasa:asmbl_6157,status:12], valid-1 NODE_3505_length_3319_cov_40.709 . gene 257 1403 . - . ID=g1645;Name=g1645.t1 NODE_3505_length_3319_cov_40.709 . mRNA 257 1403 . - . ID=g1645.t1;Parent=g1645;Name=g1645.t1 NODE_3505_length_3319_cov_40.709 . five_prime_UTR 1240 1403 . - . ID=g1645.t1.utr5p1;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . exon 1094 1403 . - . ID=g1645.t1.exon1;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . CDS 1094 1239 . - 0 ID=cds.g1645.t1;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . exon 822 887 . - . ID=g1645.t1.exon2;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . CDS 822 887 . - 1 ID=cds.g1645.t1;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . exon 257 665 . - . ID=g1645.t1.exon3;Parent=g1645.t1 NODE_3505_length_3319_cov_40.709 . CDS 257 665 . - 1 ID=cds.g1645.t1;Parent=g1645.t1;3_prime_partial=true #PROT g1645.t1 g1645 MGKPTKPASNKEESVKVVVRCRPLSANEVKQGCEQVVFMDTRKGLVEVRGASTRVDDPPKTFTFDAVYDLNTKQQDIYNDSVRPIVDSVLSGYNGTVFAYGQTGTGKTHTMEGPSRTDPDTRGVIPNSFHHIFTDISRTHDIQFLVRASYLEIYKEDIRDLLGKDQAKKLQLKEKPDTGVYVKDLTSIVVKSAKEIDRVMSEGNKNR # PASA_UPDATE: g1646.t1, single gene model update, valid-1, status:[pasa:asmbl_6158,status:12], valid-1 NODE_3505_length_3319_cov_40.709 . gene 1759 3155 . - . ID=g1646;Name=g1646.t1 NODE_3505_length_3319_cov_40.709 . mRNA 1759 3155 . - . ID=g1646.t1;Parent=g1646;Name=g1646.t1 NODE_3505_length_3319_cov_40.709 . five_prime_UTR 3155 3155 . - . ID=g1646.t1.utr5p1;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . exon 3014 3155 . - . ID=g1646.t1.exon1;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . CDS 3014 3154 . - 0 ID=cds.g1646.t1;Parent=g1646.t1;5_prime_partial=true NODE_3505_length_3319_cov_40.709 . exon 2749 2897 . - . ID=g1646.t1.exon2;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . CDS 2749 2897 . - 0 ID=cds.g1646.t1;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . exon 2390 2621 . - . ID=g1646.t1.exon3;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . CDS 2390 2621 . - 1 ID=cds.g1646.t1;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . exon 1759 2215 . - . ID=g1646.t1.exon4;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . CDS 2117 2215 . - 0 ID=cds.g1646.t1;Parent=g1646.t1 NODE_3505_length_3319_cov_40.709 . three_prime_UTR 1759 2116 . - . ID=g1646.t1.utr3p1;Parent=g1646.t1 #PROT g1646.t1 g1646 RHPHILRLYGYFYDQKRVYLILEYAPKGELYKELKRCTYFPEQRSASYVAQLARALKYCHAKHVIHRDIKPENLLLGLKGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRAYDEKVDLWSLGVLCYEFLVGYPPFEAKQYRDTYRRISNVDLIFPTYLSAGAKDLVSKLLRHNPSDRLPLDEVLAHPWIVQHTKNEAPFK* # PASA_UPDATE: g6962.t1, single gene model update, valid-1, status:[pasa:asmbl_5938,status:12], valid-1 NODE_3363_length_3623_cov_34.0812 . gene 297 2995 . - . ID=g6962;Name=g6962.t1 NODE_3363_length_3623_cov_34.0812 . mRNA 297 2995 . - . ID=g6962.t1;Parent=g6962;Name=g6962.t1 NODE_3363_length_3623_cov_34.0812 . five_prime_UTR 2885 2995 . - . ID=g6962.t1.utr5p1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 2793 2995 . - . ID=g6962.t1.exon1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 2793 2884 . - 0 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 2528 2602 . - . ID=g6962.t1.exon2;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 2528 2602 . - 1 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 2127 2250 . - . ID=g6962.t1.exon3;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 2127 2250 . - 1 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 1709 1814 . - . ID=g6962.t1.exon4;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 1709 1814 . - 0 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 1467 1575 . - . ID=g6962.t1.exon5;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 1467 1575 . - 2 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 1095 1273 . - . ID=g6962.t1.exon6;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 1095 1273 . - 1 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 710 863 . - . ID=g6962.t1.exon7;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 710 863 . - 2 ID=cds.g6962.t1;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . exon 297 482 . - . ID=g6962.t1.exon8;Parent=g6962.t1 NODE_3363_length_3623_cov_34.0812 . CDS 297 482 . - 1 ID=cds.g6962.t1;Parent=g6962.t1;3_prime_partial=true #PROT g6962.t1 g6962 MGTKGRPAPAVDDDDEMRGGYTWEKQYERTWDTIKEDATGSLAASVEDAERARRRRKRVQVGTVRRGMMRHLYVVVDMSKAMADPDLKPSRLECTLKLLEAFVVEYFEQNPISQIGFIVTRNGTATKLTELGGNPARHIDKLRKEAKSANIGGEPSLQNALELARQSLRHMPAHTSREVLAVSASLTSCDPGDIFSTIELLVADTVQCSVVGLAAEVKVCRTVCEKTGGTYGVVLDEHHFRELLMAHVPPPPISSKVDATLIHMGFPLYRSEDYPTLCACHQLFKRGGFVCPRCTAKHCEIPSDCRVCGLTLISSPHLARSYHHLFPLPAFHELPPERTAS # ORIGINAL: g3550.t1 original gene structure, not modified by PASA NODE_3524_length_3275_cov_37.8897 AUGUSTUS gene 115 2969 . + . ID=g3550;Name=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS mRNA 115 2969 . + . ID=g3550.t1;Parent=g3550;Name=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 115 678 . + . ID=g3550.t1.exon1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 115 678 . + 0 ID=cds.g3550.t1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 838 1173 . + . ID=g3550.t1.exon2;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 838 1173 . + 0 ID=cds.g3550.t1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 1636 1779 . + . ID=g3550.t1.exon3;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 1636 1779 . + 0 ID=cds.g3550.t1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 2060 2139 . + . ID=g3550.t1.exon4;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 2060 2139 . + 0 ID=cds.g3550.t1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 2380 2457 . + . ID=g3550.t1.exon5;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 2380 2457 . + 1 ID=cds.g3550.t1;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS exon 2666 2969 . + . ID=g3550.t1.exon6;Parent=g3550.t1 NODE_3524_length_3275_cov_37.8897 AUGUSTUS CDS 2666 2969 . + 1 ID=cds.g3550.t1;Parent=g3550.t1 #PROT g3550.t1 g3550 AQPFFADWVRWNAPAVGYSHISAASITDDNAEYWRAVSQLIVQGRTEESRALLSHRGLRVASQFNRDAATRAAAIDEILRKFPRASSTSVPSEFLSAWTRWHEECVARRELFADDARLYGVWQILTGDLQAIEREGTGWTERLCAVLLYAEPSVKLVDSPSLARRLAGRQGGLVDATLLAVLEYDVHQVLRNLSHFADRSFIAHLIDLLVKSGGLPPQQLDYGSDLREFFLLEYGASLAALPGLWGISADYLSSCPVYGKHFIERTLERVSPTDSEMKAKKIMRIASNSGANDVARSVARVFGALRLSQGRHGSALGWYLKINDVAMVTALADRMMDKYYETGSFDSLDMLDGLGEQMALSERLVFLAKYRELHRHYEEGDFRRAGDLLVRLFTSNLAPKRFWLTLLVDAVPLLESPDVVFDSLQTYELQRCLTELELSHMRDVYLSTDAVSAPAAPAKFKGNGVAVSSSAPENASLQDERVSVIRLALVRNLSRAIVMGK* # ORIGINAL: g1253.t1 original gene structure, not modified by PASA NODE_2934_length_4707_cov_30.5706 AUGUSTUS gene 2716 3783 . - . ID=g1253;Name=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS mRNA 2716 3783 . - . ID=g1253.t1;Parent=g1253;Name=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS exon 3657 3783 . - . ID=g1253.t1.exon1;Parent=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS CDS 3657 3783 . - 0 ID=cds.g1253.t1;Parent=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS exon 3179 3280 . - . ID=g1253.t1.exon2;Parent=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS CDS 3179 3280 . - 2 ID=cds.g1253.t1;Parent=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS exon 2716 2984 . - . ID=g1253.t1.exon3;Parent=g1253.t1 NODE_2934_length_4707_cov_30.5706 AUGUSTUS CDS 2716 2984 . - 2 ID=cds.g1253.t1;Parent=g1253.t1 #PROT g1253.t1 g1253 MAGLHTILYNLRGYKIATGELPAEEIANDTVRQGPRRRPGQKAERFTPYHLTHPQRPGGKDAPQPAAAKKPIPGPFFGDDPIAPSDRLPKSTADELGDDDNSTDFFGLKGTSSAGHAPGRVGVGVMTPGMHTGVSSAHAHTPLDTRRTHAPVLEHHNATLSSYAW* # ORIGINAL: g5399.t1 original gene structure, not modified by PASA NODE_2739_length_5270_cov_40.7063 AUGUSTUS gene 113 4850 . - . ID=g5399;Name=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS mRNA 113 4850 . - . ID=g5399.t1;Parent=g5399;Name=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 4692 4850 . - . ID=g5399.t1.exon1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 4692 4850 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 4363 4452 . - . ID=g5399.t1.exon2;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 4363 4452 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 3991 4125 . - . ID=g5399.t1.exon3;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 3991 4125 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 3466 3836 . - . ID=g5399.t1.exon4;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 3466 3836 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 1527 3204 . - . ID=g5399.t1.exon5;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 1527 3204 . - 1 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 464 1234 . - . ID=g5399.t1.exon6;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 464 1234 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS exon 113 239 . - . ID=g5399.t1.exon7;Parent=g5399.t1 NODE_2739_length_5270_cov_40.7063 AUGUSTUS CDS 113 239 . - 0 ID=cds.g5399.t1;Parent=g5399.t1 #PROT g5399.t1 g5399 MIGDRVVLAAVNGSLHASNCKLPGHEDCMEVNVGSQRTSWKVMLFLEFHKNAENLLTGGDVVRLFHAEQEKFLTCDSHDRSYKVFLRTTGRTSKTAATTSQAMWEVEVVDNDPCRGGIGLWSRLYRFKHLATGDYLAAEEDLDPTPDPTRQKLKGTTPNGQRVLHLVTTTHRGDPAAVFELDPTTIRRSDEEVEKNSYVRLKHVKTSTWVHSTSIPIDKEQEKPIMLKLGCAFTRDDREAFAIVPVSATEVRDLDFCNDADKLLKGLKSKIKDNEANQRDIKLVIKILSDLIFFVLKDENAGSDPLTVTGTPDRDRQKLLREQNILKEVFAILQAPFNDNGYGGKMLSLSQLSEKQHASVRLMCRMCYRLLRHSQQAYRKNQEYIAKWFGFMQAQIGYDLLAEDTMTALLHNNRKLLEANIKEKEIGTFINLLRRNKECRYVQYLTDLCSSNGSAIPSTQELICAAVLEDSNKDILIETLKNEKGGIVLKWLSGGIPEKASGRTTPEPASASSSRRSSVACMSRELGELACSAAKDEDDAEILRYYRCQLDLFSAMCLDRQYVAIQYLTARLPVGLLLSCIADEDLPCDLRASFCQLMLRVHVDCDPQETVTPVKYARLWSGIPNSITPDTYTMPKSSPSTETFVSTKIYVDQYLSNLESGVNSFSDVERNKLTLAVVTLARYLVYFGFYNFRELIDLTKVLLSILDSGRSLSRNNPMPTMREAVASRNGISGALSGIGAAMAGSILNSVPLGTRRGTNQDGPPEDLTVMATKLKIIEILEFICDVRLDFRISNLLVIYKGQNALRMSQVKEAAALEREEKEEVERLNPAVRAFMRRQPSDSQLIVASTTRDPEEAAQAPPPPISDDAPPMLLQVPGILSPHFDASLQAPKRSQSSAVLAHVPPAISVVDTHDSKGFLPVVKSGDAKHAVVRPKGLGKRLARRGANGFRTALNLVRNFYGDRILPHLRDIYEAYKDEQLDNETGESLPSPETEEGAVSASPVTPAESMFDPTSPMGQILDFDDANGTTLVRVLLDLGMHEYPPLVSGSLRLVFRHFGQREEVVNAFKQVQLLVSRQDVENFTQIKTDLDKLRVMVEKSELWVGKGRGSNE # PASA_UPDATE: g12653.t1, single gene model update, valid-1, status:[pasa:asmbl_9178,status:3], valid-1 NODE_749_length_18176_cov_40.1555 . gene 4564 10052 . + . ID=g12653;Name=g12653.t1 NODE_749_length_18176_cov_40.1555 . mRNA 4564 10052 . + . ID=g12653.t1;Parent=g12653;Name=g12653.t1 NODE_749_length_18176_cov_40.1555 . five_prime_UTR 4564 4818 . + . ID=g12653.t1.utr5p1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 4564 4866 . + . ID=g12653.t1.exon1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 4819 4866 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 5191 5265 . + . ID=g12653.t1.exon2;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 5191 5265 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 5587 6502 . + . ID=g12653.t1.exon3;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 5587 6502 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 6789 6891 . + . ID=g12653.t1.exon4;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 6789 6891 . + 2 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 7050 7236 . + . ID=g12653.t1.exon5;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 7050 7236 . + 1 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 7443 7649 . + . ID=g12653.t1.exon6;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 7443 7649 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 7857 8183 . + . ID=g12653.t1.exon7;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 7857 8183 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 8359 8439 . + . ID=g12653.t1.exon8;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 8359 8439 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 8691 8844 . + . ID=g12653.t1.exon9;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 8691 8844 . + 0 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 9031 9333 . + . ID=g12653.t1.exon10;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 9031 9333 . + 2 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . exon 9584 10052 . + . ID=g12653.t1.exon11;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . CDS 9584 9705 . + 2 ID=cds.g12653.t1;Parent=g12653.t1 NODE_749_length_18176_cov_40.1555 . three_prime_UTR 9706 10052 . + . ID=g12653.t1.utr3p1;Parent=g12653.t1 #PROT g12653.t1 g12653 MSKGRSKEPPAAAGPQVFGSDDEEEDDMYSGYNDTTGYEYNDFTFDEGFQQALKTSYGQRGVVPATAAPQTAMRRQNVPGTASMGGRLQTGVAPQSESQRPMTSVRAAGYTSHGGRSAGGSFDPMNQGGRGPAPPLEVKSEDSPEEVIKQLEKKVNLLLEESAIAHAGGDFKTALERAKEAGRSERFLSKQREQNGLGDQNNLDLTYSVLFNLANQYHASEMHQEALNTYSVIVKNKMFTNAGRLRVNMGNIYFEQKNYPSSIKMYRMALDQMSSAHKEMRFKIMQNIGHAFVQMGQYHEAITSYEGIMDGSPDLNTGLNLILCYYALGDRDRMRKGFAKLLTVRQGVEDEDRYYASEDSAIAVVNETLRDDTLAKMEREKRKTAEKCIMIAAKLIAASIDVSFAAGYDWCVEQVKSSAYSELASELEITKAITFLKMKDFKQAIDSLKKFEKKDTKMMSTAATNLSFLYFLENDLKHAEKYADQAIHADRYNASALVNKGNCFFATGDFERARSTYQDALNADSSCTEALYNLGLTQKRLNALDDALDCFLKLHAILRNSPEVIFQVALLYDAKDDVQQATEWFNILISVVPTDPGVLAKLGEIYDRDNDESQAFQYHFESYRYFPSNIDVISWLGAYYVDCEVYEQAINYFERASVIQPNEVKWQLMVASCHRRSGNYQMAFDTYKKIHQRFPDNIECLRFLVRICTDRGMKEVHEYVAKLRKAEKAKEVKESQQRQQGSAGESRKPQSSAGPNRGGSANRPSSMGSRGSGSASRPYSGVSNGDDDVVSDQREYSRPVDASYSDPLGDMPSRPKTATAKRRSEDDFDNEEIGDDLLPD* # PASA_UPDATE: g12654.t1, single gene model update, valid-1, status:[pasa:asmbl_9173,status:12],[pasa:asmbl_9176,status:12],[pasa:asmbl_9177,status:14],[pasa:asmbl_9179,status:12],[pasa:asmbl_9180,status:12], valid-1 NODE_749_length_18176_cov_40.1555 . gene 10473 17984 . - . ID=g12654;Name=g12654.t1 NODE_749_length_18176_cov_40.1555 . mRNA 10473 17984 . - . ID=g12654.t1;Parent=g12654;Name=g12654.t1 NODE_749_length_18176_cov_40.1555 . five_prime_UTR 17955 17984 . - . ID=g12654.t1.utr5p1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . five_prime_UTR 17650 17668 . - . ID=g12654.t1.utr5p2;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 17955 17984 . - . ID=g12654.t1.exon1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 16785 17668 . - . ID=g12654.t1.exon2;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 16785 17649 . - 0 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 16064 16506 . - . ID=g12654.t1.exon3;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 16064 16506 . - 2 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 15164 15854 . - . ID=g12654.t1.exon4;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 15164 15854 . - 0 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 14688 14820 . - . ID=g12654.t1.exon5;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 14688 14820 . - 2 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 13863 13944 . - . ID=g12654.t1.exon6;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 13863 13944 . - 1 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 13590 13637 . - . ID=g12654.t1.exon7;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 13590 13637 . - 0 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 13240 13306 . - . ID=g12654.t1.exon8;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 13240 13306 . - 0 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 12705 12753 . - . ID=g12654.t1.exon9;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 12705 12753 . - 2 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 12269 12457 . - . ID=g12654.t1.exon10;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 12269 12457 . - 1 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 12019 12069 . - . ID=g12654.t1.exon11;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 12019 12069 . - 1 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 11378 11460 . - . ID=g12654.t1.exon12;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 11378 11460 . - 1 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 11076 11176 . - . ID=g12654.t1.exon13;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 11076 11176 . - 2 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . exon 10473 10960 . - . ID=g12654.t1.exon14;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . CDS 10610 10960 . - 0 ID=cds.g12654.t1;Parent=g12654.t1 NODE_749_length_18176_cov_40.1555 . three_prime_UTR 10473 10609 . - . ID=g12654.t1.utr3p1;Parent=g12654.t1 #PROT g12654.t1 g12654 MGNLCGSAVSHCIGKTCAHCFCDAGWTGPLCSTPCAADTYGPACLSNCTCLNGATCDRFTGACTCSPGWTGLTCDTPCPARRYGNNCTGVCTCDSTCDRFTGACACSEGWTGLRCDVPCGSDRYGANCTSVCQCAHGASCNRFTGACTCTAGWMGLTCEQECSTDRYGANCSKSCACANGASCDRFSGACTCTEGWTGTLCDAPCPLNRFGANCSMSCACVNGDCNRFTGACACNAGWTGPTCGDACAKGRFGANCTSVCACGDGNCNPFTGECLCLKASTFYGPACTKCACANGGVCDDGLNGTGACNCSQVLGFAGPQCNISCNSPILSSSNHTYGLGCSQLCPCVHITSCDPSSGECVCASGWTGTVCSKALPPSMPDVEASVITTTDATTMKEIVAIRLNWTQVEDALGERPLWAPSRFEIQRLGCPPAVFSVGNVREYVDTGVTLHQGYSYFVTAVNALNSTSTAAIAGIKEVLKSEVPKPPTIVSVTPTLTEDKLRSMIKITWSEDTSSGPVIESRIVRNGGSPIVVKGAAFYDDTDVVFGQHYEYELRSLNENGLSLPSNKTVVVASIGPSDGTSGGGSAAAASGGSSAGAVAGGVIGSIVGVGCVVAALLLFRKRVEQKQSEALARAELSLIDTVVRRPEIAEMELHGSCIVLRNRIGEGEFGEVYLADVTLERDGVVTSVKAAAKTFKVNAMSAEEIRSARSAFMQEIQLMSSIPKHGHIIELLGVCTQTEPNCCVLEFAQHGDLRHYLADSKSSQLTSADFLCFCIDIARGMEHLAKCQIVHRDLAARNCMVCAGPRPVNANERGWKLSPKGHVIVKVADMGLSRDTGASGDYYLAKTRRKLPVKWMAPESLEKRVYTTSSDSWAFGVVMWEIFSRGSRPYPGVDNHAITRFLAENKRMDQPKGCPPDAFAAMSSCWRKLPETRPTFSQLILQLRRAAAVASGITTEQQRNTSLWTLSDGKDAHMASTTDTAATDTVPIADGYRNSTSSVSCGLGVDAAQNQPSSISLAIYVETEAPAYSYDNEHLLPHGMGNDNGDSFA* # PASA_UPDATE: g12652.t1, single gene model update, valid-1, status:[pasa:asmbl_9172,status:12], valid-1 NODE_749_length_18176_cov_40.1555 . gene 299 4138 . - . ID=g12652;Name=g12652.t1 NODE_749_length_18176_cov_40.1555 . mRNA 299 4138 . - . ID=g12652.t1;Parent=g12652;Name=g12652.t1 NODE_749_length_18176_cov_40.1555 . five_prime_UTR 4095 4138 . - . ID=g12652.t1.utr5p1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 4032 4138 . - . ID=g12652.t1.exon1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 4032 4094 . - 0 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 3831 3885 . - . ID=g12652.t1.exon2;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 3831 3885 . - 0 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 3523 3650 . - . ID=g12652.t1.exon3;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 3523 3650 . - 2 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 2993 3083 . - . ID=g12652.t1.exon4;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 2993 3083 . - 0 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 2597 2696 . - . ID=g12652.t1.exon5;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 2597 2696 . - 2 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 2163 2267 . - . ID=g12652.t1.exon6;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 2163 2267 . - 1 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 1699 1840 . - . ID=g12652.t1.exon7;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 1699 1840 . - 1 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 1208 1359 . - . ID=g12652.t1.exon8;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 1208 1359 . - 0 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 881 955 . - . ID=g12652.t1.exon9;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 881 955 . - 1 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 598 668 . - . ID=g12652.t1.exon10;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 598 668 . - 1 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . exon 299 427 . - . ID=g12652.t1.exon11;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . CDS 417 427 . - 2 ID=cds.g12652.t1;Parent=g12652.t1 NODE_749_length_18176_cov_40.1555 . three_prime_UTR 299 416 . - . ID=g12652.t1.utr3p1;Parent=g12652.t1 #PROT g12652.t1 g12652 MSFKMANRESRQLAFAFLEHLADEISTGRLPADAAEGVEVAVQCLSEAYGIDVHNVDQQRDLSIRPARLLDVFKLAVNTIKKTAAPAAAAPGAAPAPSAAEVSKKAEEYKTIGNDKMKERDYRGAIDAYTQAIQISGGSAIYYGNRAAAYASIDEHDKAIDDCQLALEFDPSYVKAFSRMGSAYLSLKRYNDAKEAYEKGLLVDPANVNCKEGLAMVNQKIAAEVAPQAPRGMPNSGNMGGLGGLASLLSNPALMGLAENLMSSGMMEQLMQNPAMQNMAENMARGGGMPNISDLLSDPNIRNIGEQVAASMGHARPEDSTPRDPAADPE* # PASA_UPDATE: g583.t1, single gene model update, valid-1, status:[pasa:asmbl_10150,status:12], valid-1 NODE_965_length_15351_cov_42.545 . gene 10631 11728 . + . ID=g583;Name=g583.t1 NODE_965_length_15351_cov_42.545 . mRNA 10631 11728 . + . ID=g583.t1;Parent=g583;Name=g583.t1 NODE_965_length_15351_cov_42.545 . exon 10631 10709 . + . ID=g583.t1.exon1;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . CDS 10631 10709 . + 0 ID=cds.g583.t1;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . exon 10945 11075 . + . ID=g583.t1.exon2;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . CDS 10945 11075 . + 2 ID=cds.g583.t1;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . exon 11225 11274 . + . ID=g583.t1.exon3;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . CDS 11225 11274 . + 0 ID=cds.g583.t1;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . exon 11446 11728 . + . ID=g583.t1.exon4;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . CDS 11446 11701 . + 1 ID=cds.g583.t1;Parent=g583.t1 NODE_965_length_15351_cov_42.545 . three_prime_UTR 11702 11728 . + . ID=g583.t1.utr3p1;Parent=g583.t1 #PROT g583.t1 g583 MERRLPNILQRRAATNERIDWVVILGGTNDIGSGSTSDEVFGALRNLHASSHNYGARTIALTIPETEYEQFSKPHMQTRLETNNKLREYALSSENKVLLLDLAALIPYHSLDDGERAALWDDGLHFTEAGYDRIGEAVYKVLMEGLQIPSSSSIPACTNADPNHFDCFDSV* # ORIGINAL: g581.t1 original gene structure, not modified by PASA NODE_965_length_15351_cov_42.545 AUGUSTUS gene 226 4318 . + . ID=g581;Name=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS mRNA 226 4318 . + . ID=g581.t1;Parent=g581;Name=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 226 344 . + . ID=g581.t1.exon1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 226 344 . + 0 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 494 624 . + . ID=g581.t1.exon2;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 494 624 . + 1 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 871 1025 . + . ID=g581.t1.exon3;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 871 1025 . + 2 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 1364 1448 . + . ID=g581.t1.exon4;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 1364 1448 . + 0 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 1666 1775 . + . ID=g581.t1.exon5;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 1666 1775 . + 2 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 2180 2250 . + . ID=g581.t1.exon6;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 2180 2250 . + 0 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 2565 2725 . + . ID=g581.t1.exon7;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 2565 2725 . + 1 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 3019 3446 . + . ID=g581.t1.exon8;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 3019 3446 . + 2 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 3636 4160 . + . ID=g581.t1.exon9;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 3636 4160 . + 0 ID=cds.g581.t1;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 4316 4318 . + . ID=g581.t1.exon10;Parent=g581.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 4316 4318 . + 0 ID=cds.g581.t1;Parent=g581.t1 #PROT g581.t1 g581 IVWNILEADSVCNSIAQFNERSTLMSLCDSLDRLMVNAHSTSERQLRNEVLIIVSLLSQQSITHPLFVSTGFLSHILAFATHPEISPHGMALAASATTLATAMVDNTPLRETSESSAGAAAAALSSLISRVPMTQEPEDFELKRLLFSLVLSISKEAQSWLVIGESGFVSVLFMYICEDGNTQSAAPHWNGAQFEELQLRVLSLMVALLPSCLGEFMSVRGPHRLLEFLRWCLDPSRATAKQKQVTGVLRVLLSVCDEDESTIHRELGELGAIDTLLDFLRRPRAIPTSSTDLANRTDALLIISAMCKSEPINREMVGAEGVDAVMGYLQHDPKEASSGLGHAELLIAAVDCAWSVVVGCPLNESAFLEREGAFILLDLLEACPDRMRNLLLGAVLDLCENSQAIDHVLEWRSEANETRALLIQLWRMEEQRLGIPLSTTGRLVDVTNPLGAAPAPSLSPRPVSARKSPAVMATSSSVPNGVVLPSPQGLFPGFTGTHVPGAATSPQLAPASLATLGATGGSVPGQSAFTSVNATLGGNSLGLEAFALHSTAARGSQTVMEVSQNMRAKIYAFFCRLGFDARNQSLSTEDAIKLE* # ORIGINAL: g582.t1 original gene structure, not modified by PASA NODE_965_length_15351_cov_42.545 AUGUSTUS gene 4403 9780 . - . ID=g582;Name=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS mRNA 4403 9780 . - . ID=g582.t1;Parent=g582;Name=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 9743 9780 . - . ID=g582.t1.exon1;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 9743 9780 . - 0 ID=cds.g582.t1;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 9227 9332 . - . ID=g582.t1.exon2;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 9227 9332 . - 1 ID=cds.g582.t1;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 7922 9102 . - . ID=g582.t1.exon3;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 7922 9102 . - 0 ID=cds.g582.t1;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 4873 7735 . - . ID=g582.t1.exon4;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 4873 7735 . - 1 ID=cds.g582.t1;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 4403 4477 . - . ID=g582.t1.exon5;Parent=g582.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 4403 4477 . - 0 ID=cds.g582.t1;Parent=g582.t1 #PROT g582.t1 g582 MSSSEGDGDDSMRPARSVLYTGKLSKQFNSIIAEVQRNLPTIDDFGSDDEDDDGTEPVEVFVRHGWTNKFVTANDNIDDDVFDFSLHVIEKPSPSQSQPSHSGGSPSFARSLSNAQTQSPHAPSPQSNNRPSLHSDDSFVLEPIEFEEVDFAELGLAPRSGMRTGEEAFHPSEASQPFHAYIPSSTPSIAVPIGDSELDALLQSLDGPPHGAKKSARSADESSAIDSKVEAVKAIFAQQLQQQQPQPQRASVIDDEGDAEASDTAANDGDAASATLDHFDDDDDNNDDDSRDAFEMGDHYDSDYSGGDEGASAWPHADPGDVDEAVAMWDEGELLSHSQPQMSIQELIARSKADPTFEKKKGEKSHHKSVEGKAVPLVTKQGAGTTALAGKFGRLHAGVGAPPSSSPEKKKEKTIFLDLRPTSGDRPPSAQEVDSDEQSEKSDEKKSSSSSSDEDDWREARNKAKVAATTTKKSSVPTTTQNGNDNPATQPHSGVSKSSGSRAEREALKKRREDLCAAVTAASALAGIVCTCEADVSFGPVPARFAAEQISGDAATVTFSPPRQMDCAVVISVDFFALEVRDACRIAGWLFGGSVQAGAGATSHGVVASDADVDPFVVVSAALVGQWSPEGNALADDTPRLYAVVEPPFSGKGKRKVTDVTQFRQSIRQFLEQNTLRGVMLWDPPSTGSGSTATSTTTDLPTTLSKTVRVHESDAAAASFLSSEISLAWVSTTPAVIGGDASQASAASVTNGTPIMCNPSDVAVSVIHASRGDVIAASLFRVFSEGLSVCGMRSVARPNAPGHARDTFDSRIRGGDGPDIPTGTASWDASRACVALCVHGKNALSRWQAAVGPADPAIARQTDPCSLRAVLGSTRSRNALTCTRGSDTQRAAEDVAYWFGGRLACDAASVDASAQKAAALAAVEETRARMAMLVHPRTELGVVSFAVGQNAPISLPLSMALVWCQSLGFEVTHLSRVIGLAKAAKSLPSVSLLSRVGTALSVSLPAAAPAAAEAVVFVLAFRGPNAGGVAMACARMLLEKNVAQSAYGLRALADELSSLISLSPALPGRYDVELTLRGLEVPIVRSSSELRQTILIAFVGSDAIAGSWRAIETLLSASPLSCGAVDGSDGVDHHLSASGASVSIRQQAPARQTSTTDCVDDGEAFDLVGAKVIMSLEEYQAKELTPIEIGEGGWRASVRSLVGKPSLLVVVQRRAAFAAIASAETHIRTLIGCTVSVAGSVGGEGRLGLIVSPSPDVAFRQVALLFGDAELSHAPQTPREVRFLPPPVPSVGVLASIVAGPSPIHSVACVWGTTHASMEQRVARLLRRLARDGFAVVGVRIVGEKPSLLGSLRESSAVAGRDKSVSSGGMLYGLVCVRRENAVERLVAVVQDESATLLGHLRPPKATSPVRFLPASARPL* # ORIGINAL: g585.t1 original gene structure, not modified by PASA NODE_965_length_15351_cov_42.545 AUGUSTUS gene 13638 15207 . - . ID=g585;Name=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS mRNA 13638 15207 . - . ID=g585.t1;Parent=g585;Name=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 14857 15207 . - . ID=g585.t1.exon1;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 14857 15207 . - 0 ID=cds.g585.t1;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 14377 14526 . - . ID=g585.t1.exon2;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 14377 14526 . - 0 ID=cds.g585.t1;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 14021 14152 . - . ID=g585.t1.exon3;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 14021 14152 . - 0 ID=cds.g585.t1;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 13638 13769 . - . ID=g585.t1.exon4;Parent=g585.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 13638 13769 . - 0 ID=cds.g585.t1;Parent=g585.t1 #PROT g585.t1 g585 MDVDASAAQPEHVTDNNPCNNPFSWLADGAPVAVAHVQDEEAMRNVRVQKATVEGEVGAKEGRLAELYRLAINAMALVASENAAECDTPDGKVQCVLCLDAMPMSKYARHVEKCVFRGEPPVSFSVRRCFPRFSRVRELMCDARSPNGDMCMRPRAACEAHNGPMHSRGLKNTPCGHHDADGSICMRIKCVRHYEWERTSQICAEYDLFHKYLDLEILLREEEALMLRGERRLHPTLANAINCTTTHNPLNTLV* # ORIGINAL: g584.t1 original gene structure, not modified by PASA NODE_965_length_15351_cov_42.545 AUGUSTUS gene 12238 13191 . + . ID=g584;Name=g584.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS mRNA 12238 13191 . + . ID=g584.t1;Parent=g584;Name=g584.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS exon 12238 13191 . + . ID=g584.t1.exon1;Parent=g584.t1 NODE_965_length_15351_cov_42.545 AUGUSTUS CDS 12238 13191 . + 0 ID=cds.g584.t1;Parent=g584.t1 #PROT g584.t1 g584 MDVIVHLADEHVFTPYVYPADWTEDYWGRQLLTLFVVTNVGGYLLYLIFATLSYIFIYDKSLLRHKKFLKNQIWLEIIYTCKSIPMMSIPTIFLFLAELRGHSRLYDDVNTYGKPYLIFSFFFFLFFTDMCIYWIHRWLHHPLVYSRVHKPHHKWLVPSPFASHAFHWLDGFLQSSPYHMFVFLFPLHKMLYLGLFVFVNFWTISIHDGDYRVPKFLEDKLNGAAHHTDHHLFFNYNYGQFFTLWDRLCGSYRHPSAFEGHGPIDDVREADARTSKTAKVAASTPSKKTSPAAVDVDSDADSTPKRVLRPRKMASAS* # ORIGINAL: g6770.t1 original gene structure, not modified by PASA NODE_318_length_27094_cov_42.5376 AUGUSTUS gene 7261 15228 . + . ID=g6770;Name=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS mRNA 7261 15228 . + . ID=g6770.t1;Parent=g6770;Name=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 7261 7364 . + . ID=g6770.t1.exon1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 7261 7364 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 7628 7792 . + . ID=g6770.t1.exon2;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 7628 7792 . + 1 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 8818 8944 . + . ID=g6770.t1.exon3;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 8818 8944 . + 1 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 9357 9428 . + . ID=g6770.t1.exon4;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 9357 9428 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 9702 9912 . + . ID=g6770.t1.exon5;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 9702 9912 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 10237 11280 . + . ID=g6770.t1.exon6;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 10237 11280 . + 2 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 11772 11901 . + . ID=g6770.t1.exon7;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 11772 11901 . + 2 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 12305 12398 . + . ID=g6770.t1.exon8;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 12305 12398 . + 1 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 12574 12779 . + . ID=g6770.t1.exon9;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 12574 12779 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 13094 13686 . + . ID=g6770.t1.exon10;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 13094 13686 . + 1 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 14005 14153 . + . ID=g6770.t1.exon11;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 14005 14153 . + 2 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 14490 14539 . + . ID=g6770.t1.exon12;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 14490 14539 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 14785 14827 . + . ID=g6770.t1.exon13;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 14785 14827 . + 1 ID=cds.g6770.t1;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS exon 15055 15228 . + . ID=g6770.t1.exon14;Parent=g6770.t1 NODE_318_length_27094_cov_42.5376 AUGUSTUS CDS 15055 15228 . + 0 ID=cds.g6770.t1;Parent=g6770.t1 #PROT g6770.t1 g6770 MCIITVRHHAVPVVPKLKIAFLVPEEIASGRDFGWTFAAQEGRLFLQYTLRDEIFTEHRTVSPADSAAQLAVINDFVARGYGLIFGHHFGYMNVMNQTAAMYPNVKFVHISGFLRRPNLATAFARMEQARYVAGLIAGKMTRTNAICFVAAVRIPEVYRIFNAFAIGVAKANPAAKVHITWINTWLDTELEKYAVRKLFNTTCCDIVAGHTGTLEIEKEAKDAGKYAIGYYRDTSQFVSEAVLTSSVFKWGPLFLKYTLRAMNNSFVGDDYYSGFEDSLVDLSPYSFKVPLAVAKLADDEIKRLRAATAPNDGIFCGPIVNRNVGECLTDDQLTAFESTVDGAFTGVGTMNYISNVVFMGDTALPPVPCPSNCNSRGTCSIKGVCTCYPGYGDVDCGIDTKSRTNIGSIVGPAVGVAAVLLLAAAAVFYLRVVARRKLESEWIIDQDALVVIQSGGFMQSSRASLCSEKGGKSGAHRRSSRVSIGTEKSAFSSEASAGGANMHGPTYALSATFKDRRVALEAVATRMPSRNDRAFVAFTRDMIEIKQLRHPGVLEVFGATIVEPFYIVSEYMGSGSLDDVLRNEHLPLDMAFKCSMARDVASGLKFLHKAGIVHGRLKPSKVLVSDRFQCKIGGFGLAAFRGKKVLDHQVHADCRNLVYLAPETWPYFTSDSEMANNRASSNPRKSSVSALLTSSSKSTVDVLGAPTEQSDIFSFGILLYEIFTRQYAYSKFQKDLPVVVEDILKNGIRPADAEDFASGGSVGAKAFSLMENCWMPDATSRISIDECIRRMRSLAPQTTDLVARMLVVMQEYANNLQGLVAERTHELELEKEKTDKLLYSLLPISVANSLRDGRAVEYERLDSVTIMFTDIVGFTTISSKSTPMQIVALLNRLYTSFDGIIDRYNAYKVETIGDAYMVCSGLNVTGVRCVEHAVEISELALELIAAVPTIDMSDQADDLLQIRAGLHSGPIATGVVGIKMPRFCLFGDTVNTASRMESNSVAMRIHISETTNAFVEPTNRYVIESRGEIEIKGKGMMRTAWLNARRPGVDSLK* # PASA_UPDATE: g6771.t1, single gene model update, valid-1, status:[pasa:asmbl_5689,status:12], valid-1 NODE_318_length_27094_cov_42.5376 . gene 15592 19453 . - . ID=g6771;Name=g6771.t1 NODE_318_length_27094_cov_42.5376 . mRNA 15592 19453 . - . ID=g6771.t1;Parent=g6771;Name=g6771.t1 NODE_318_length_27094_cov_42.5376 . exon 15592 19453 . - . ID=g6771.t1.exon1;Parent=g6771.t1 NODE_318_length_27094_cov_42.5376 . CDS 15848 19453 . - 0 ID=cds.g6771.t1;Parent=g6771.t1 NODE_318_length_27094_cov_42.5376 . three_prime_UTR 15592 15847 . - . ID=g6771.t1.utr3p1;Parent=g6771.t1 #PROT g6771.t1 g6771 MLVVGEREERARKLKEERARDYREFLSSREGHRRRTTSDGAVEMAALPLGEREEFAKRLKEERSREYNEYLRNGGGNRRRRRTNDPDDAPVPAAPLRQTDLRMLQPYLQGPAAPQQQQQQQQQQQQQQQQQQQQQQYQQQPTTRRGDVYDRAPIDDFRPLVTGAEDLLDELRRGRSRVRFREPDSFGGGLALSPPSYATMNKDDYLSLLEDMPRRHQSYDNPSSSLGLSGNGGGAQGLQQYVQQPQQQQQQQQQQQQQQQQQRYQAPQQGGQGMSFINQPGSNAQPTHGRRGQTLDKEDAKAAYRRDLEEQLRIKNDMKMREKAENARFDQTKTIEAQSYNPFGRGGAGAPHRDATGQIVSNLKTVIATGQTLNSAYQQQPALGGMQSMQQMQDMGGYQPSFYASSGGQYQPQPFGGAPQSQFGYQPQQQQIQQMQMQQQQQQQQQMMGMGMGGRPPVDEDPKMAYRRELEEQMRQKNAKKVQEKAELERFNKMKDQEIATYNPFGRAGAGAPHRDASGQIVSNLKAIHIANVAGASLGGAQQQQQPGFVVSGNVPQQQHMQMQANNGGFGNGTFSPQSTLFGQQGGYDQGAQGGYQPYQPMFSPPQQGFQAPLGGSGSFGAPASFDQSGGQQQQGAARVSQPPGGASNFSLGRGLANLDPYAKQEANARAVVQTSYQDDLKRQVEEREAAKRLAQEKEKAEEVKEMQRLQKEREDLQRQYEREQEERKQKEENQRRQQEELAKQRAEAEQRALDDKKKKQELRRGPAADTQPAAPQQQHGNGRAQSPPIPTMRQQTRSPPIPTMRSQQQAPASPPLPAMRQQQQQQQPEEQRRVASSRGRPSDQGDRSRPSSGAAHQSRRDASHADVAGDPEESTRKVMDQLSAMRKQLQSEQKKLESQMVKNQETYSQLQSRAPPAGRPPRHDAGGYDTGADAFGLAMQRKGASHADSHKDLDIMDILLPQRRGASPSTHEIAREFDHLKYRDTDAGTRRRVMERYPEPPRSGDALDTQQRAVLRDQAREISHMRTSYGVRQGAAASTTSMEDSRRRTGTADSMRGSLNAESRFVAAGDAASSIGFDGDNSAAAHGRRARKQWGGSGPQPSGSSGPRGPSPGAQSTSSFNIESVSRKNEERLRRLEQLGASSAIAVAPSSINASEPLDVLEQFMRKGRPASRPMSGRSQRSLDAETMYQMTAASKRSIV* # PASA_UPDATE: g6772.t1, single gene model update, valid-1, status:[pasa:asmbl_5688,status:3], valid-1 NODE_318_length_27094_cov_42.5376 . gene 21881 26115 . + . ID=g6772;Name=g6772.t1 NODE_318_length_27094_cov_42.5376 . mRNA 21881 26115 . + . ID=g6772.t1;Parent=g6772;Name=g6772.t1 NODE_318_length_27094_cov_42.5376 . five_prime_UTR 21881 22204 . + . ID=g6772.t1.utr5p1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 21881 22272 . + . ID=g6772.t1.exon1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 22205 22272 . + 0 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 22447 24159 . + . ID=g6772.t1.exon2;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 22447 24159 . + 1 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 24322 24515 . + . ID=g6772.t1.exon3;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 24322 24515 . + 1 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 24642 25111 . + . ID=g6772.t1.exon4;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 24642 25111 . + 2 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 25245 25374 . + . ID=g6772.t1.exon5;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 25245 25374 . + 0 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . exon 25556 26115 . + . ID=g6772.t1.exon6;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . CDS 25556 25638 . + 2 ID=cds.g6772.t1;Parent=g6772.t1 NODE_318_length_27094_cov_42.5376 . three_prime_UTR 25639 26115 . + . ID=g6772.t1.utr3p1;Parent=g6772.t1 #PROT g6772.t1 g6772 MSEATAADHDPAAPAERPLDVAGDNAPMDDDEDEIPMVPVEAVAVTEEEPSKMELDAPELPSESGPSGNVAENSAPVEEDSKKAPESVAATESAPAALPDTQPPAARARSQSPPPKRHDDERAAVRRESRYDDRSDRRDSKGEYRKDSRVYDDRDRRRTRDDSREREREREKERERERERERERDRPRERERDRPRDHRDSRDGKERERSDRDRSRDKDRDRSDRRKYDDRDRSRDRARDRSGRDRERDRDRDRRSRRTSRSGSRSRSRSRSHSRSRSRSASRSPSRSPPRSKAASRRSRSRSAAREGSRRSGRSRSRSRSRSASRSRSPPRRQASPPRDRERNGGPSTAPSKPVDGRKHTTNQLAYVAKIVDDLLSTPDIEENFGTPVVEKWVLLRDSYPLVISKPMDLGTIRTKLASKSYRTASEAMADIELVFANCLKFNQDVFRETPKNPIKQVMDKARKRYITLLAELPKPERDLQPGEEVTLPGGDKKPGSRKSIKGGLTAASLAGAMGSPGLDAKDRRHSIRERKPPALEMPDVSAKQQKQMAACADLIDKLKHKKHFDIAQWFYEPVNIPGYTDTIDRPMDLRTIREKLQVKKYASPDEFAADVRLMFTNCYTYNNPPDPVYVAGKKLQTIFENNFSVIKAMHVDDGAAREQVELEIADCEAAVRGLKEDLANAEARLEQAKQRRNALTDNAKPRKSIKSSAGLPGLKKKPGRKPADGGNTPSGARGPKGKKRARESDEDTRPAKKQAGKPGRKSTGGDAGSSERRADKPMTHAEKSALSHDIGLLPEDEIPEVVKIIDRRMPNLKNENGTIEVDIDVLDASTLRELQRYVGKALDKVKKKTSGKKGNSHDVDVMDNNLSSEGSSSDSNDSDDSGGF* # PASA_UPDATE: g6769.t1, single gene model update, valid-1, status:[pasa:asmbl_5691,status:12], valid-1 NODE_318_length_27094_cov_42.5376 . gene 70 4637 . - . ID=g6769;Name=g6769.t1 NODE_318_length_27094_cov_42.5376 . mRNA 70 4637 . - . ID=g6769.t1;Parent=g6769;Name=g6769.t1 NODE_318_length_27094_cov_42.5376 . five_prime_UTR 4499 4637 . - . ID=g6769.t1.utr5p1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 4426 4637 . - . ID=g6769.t1.exon1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 4426 4498 . - 0 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 3966 4134 . - . ID=g6769.t1.exon2;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 3966 4134 . - 2 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 3473 3692 . - . ID=g6769.t1.exon3;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 3473 3692 . - 1 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 3116 3300 . - . ID=g6769.t1.exon4;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 3116 3300 . - 0 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 2551 2833 . - . ID=g6769.t1.exon5;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 2551 2833 . - 1 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 2014 2097 . - . ID=g6769.t1.exon6;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 2014 2097 . - 0 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 1678 1812 . - . ID=g6769.t1.exon7;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 1678 1812 . - 0 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 1177 1322 . - . ID=g6769.t1.exon8;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 1177 1322 . - 0 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 662 869 . - . ID=g6769.t1.exon9;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 662 869 . - 1 ID=cds.g6769.t1;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . exon 70 218 . - . ID=g6769.t1.exon10;Parent=g6769.t1 NODE_318_length_27094_cov_42.5376 . CDS 70 218 . - 0 ID=cds.g6769.t1;Parent=g6769.t1;3_prime_partial=true #PROT g6769.t1 g6769 MAADATAVVAQVEQIEATEQPVSFARCPGTVCGIDIDIINSGIDGAADLALVSPALMRDARPLTTLPYGLPPVAWASQDVRTEVEVRFIFSEPSVGSHALGKCQEVIGAVSHPSQWLYDAAAGRLGDALAPLPTTTTIGIGRDATTGVETGWFETPLAGSGAASNNSTSLLRAPGPMAEFHRGSTAAYPFRPGGLDEDVIRRVEADVDGTADRSGRGALSYVDADSSSLLDTPPGFGGPVRLRRRVNEARDMPLKSGEGVSRKNILRLGDILADVGTCLGQAEGIVITEDEVEAASREREDRTQMEQRARITTHATHSQTSTDALSARGDTLDTVLDVTKSAPLLPSESKPSTAAPDGSWAVLVDLNADVSDFHEQIPEMAYKWPFELDPFQKQAVLLLERHECVFVAAHTSAGKTVVAEYAIALSAKHMTRTIYTSPIKALSNQKFRDFKRTFGDVGLITGDVQIQTDASCLIVTTEVLRSMLYRGADVIRDVEWVIFDEVHYVNDSERGVVWEEVIIMLPDHVGLILLSATVPNTVEFADWVGRTKKR # ORIGINAL: g12150.t1 original gene structure, not modified by PASA NODE_2190_length_7343_cov_38.3137 AUGUSTUS gene 876 6313 . - . ID=g12150;Name=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS mRNA 876 6313 . - . ID=g12150.t1;Parent=g12150;Name=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 4570 6313 . - . ID=g12150.t1.exon1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 4570 6313 . - 0 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 4252 4331 . - . ID=g12150.t1.exon2;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 4252 4331 . - 2 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 3979 4076 . - . ID=g12150.t1.exon3;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 3979 4076 . - 0 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 3433 3524 . - . ID=g12150.t1.exon4;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 3433 3524 . - 1 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 2803 2935 . - . ID=g12150.t1.exon5;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 2803 2935 . - 2 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 2154 2382 . - . ID=g12150.t1.exon6;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 2154 2382 . - 1 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 1750 1890 . - . ID=g12150.t1.exon7;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 1750 1890 . - 0 ID=cds.g12150.t1;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS exon 876 1397 . - . ID=g12150.t1.exon8;Parent=g12150.t1 NODE_2190_length_7343_cov_38.3137 AUGUSTUS CDS 876 1397 . - 0 ID=cds.g12150.t1;Parent=g12150.t1 #PROT g12150.t1 g12150 MRIWVVDLRETSTQRRFPIEHVTRQTTVIELRAIIEKKTGIPAESQRLCHLDKELANYIVDESTGAKALLHARLIQFRVENEGTLVLKVRTPTDASHPHATKGKSAVEVKKRAAAIAAAEADLVQAGAPAGVAARIANTTASPGLAIPKAVVRTTSVAQTMRPLRAGAGGDAATPSPVTGSADSPSNVGLRKALSPQHGRTSSGVSASVGGLKSVSGRASTAIVSLGVSSPVSSPLYAKGEEVEAVDTNNDAWFEARVVAVKKSISAPSGYLYTVRFDGYEENADLPASGLRPRSERAVDLDTLRPGKRVLANYNFDEPSECGFWYIGDVVRVDYKGAREKPIVRVRLVGGCVKDTVVAAWNSEVFELEHRDTPVQQQQQHQQQQYQQPRLHAQLQTQLQPRARTPIGMGSPVSTNTSGTPPLAATRSPAPRTPNTLKSLSTHGNASATPTPRAVATPREDSSRTATPVPASLHSPALFSDERLGRRRSASYEPSNDDDGEEGEQERFTNKNRRMHQVSPSEEDESEQSEAPMDGLDSDDEAAMDRRGGSRRKAPKRKDKSNRQRSLPRKEHGGHAPAATHNWTCDLCLADPTIKNCRVCGCMECTAKDREEEMLICDECKMFFHLDCLVPPLAAIPDEDWFCPSCVRLLDVMQESNPAIAEEVERMIARNEGIQMDDNMLFGKRPGITAGMTWTSRKQLTSCGVHMARTSGVHGGRLGAASVVVSVSNMPQMDCGEEILLPGFGGRNGAEIIRHQDIATLENRAMATSCAAPLSDSGAEAKNWRAGKPVRLIRSSQMGGSYAPASGFRYDGIYKVVKYYHSLLEGYKVWLFLLRRDDEEPAPWADDQPGNAATPEKNHTHSEKLDADRSEIDARVVPVVVDNGVLGAVASCDEIAASDGVKEGMDGANAVNPDSRDAEGDRSVIGQVGADVDFADENMPDIAQYGDDRVVAAEADAPETATDKHAANGATDDANEGDAVAARKKRTALEMEGQDAVDSPSKRARTGFFDLF* # ORIGINAL: g13026.t1 original gene structure, not modified by PASA NODE_1063_length_14316_cov_42.7536 AUGUSTUS gene 5200 10240 . + . ID=g13026;Name=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS mRNA 5200 10240 . + . ID=g13026.t1;Parent=g13026;Name=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 5200 5391 . + . ID=g13026.t1.exon1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 5200 5391 . + 0 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 5478 6071 . + . ID=g13026.t1.exon2;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 5478 6071 . + 0 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 6188 6256 . + . ID=g13026.t1.exon3;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 6188 6256 . + 0 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 6405 7247 . + . ID=g13026.t1.exon4;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 6405 7247 . + 0 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 7390 7471 . + . ID=g13026.t1.exon5;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 7390 7471 . + 0 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 7686 7952 . + . ID=g13026.t1.exon6;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 7686 7952 . + 2 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 8382 8483 . + . ID=g13026.t1.exon7;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 8382 8483 . + 2 ID=cds.g13026.t1;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 8715 10240 . + . ID=g13026.t1.exon8;Parent=g13026.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 8715 10240 . + 2 ID=cds.g13026.t1;Parent=g13026.t1 #PROT g13026.t1 g13026 MQGGLTPELAAGLAGNPGLAFAVLSNARHMGAQSQQTPIPGDAKGGSPMGFGTIGQQLTPQHLQQQQQQQQQQQQQKKQQQQQQQQQQVIQQQQQQQQQQQQQQVLQQQQALQQQQQHAQLRSLLGNADPDQARVIMQYILQQQQQQKAGQIPTQQQQQQQLQQQQLQQQQQKGVPVDPKAVRPGMPKPQQAQQAALQQRTHSALLQQQKDARKPPAQTQKQQLQPHQASKMAQQHKGAPGILSDGDRIMEMLCESCGTQRATANGVCVSCQRLIEGNPNFPRTQGVSFQKQQQQGGASGSPVMTQWNPAGMIAQTRTRPPAPNASAAVQNFGFHMPVAPAGNSAQQQAQVSGQLRQQHLQQQQQQQQLQQQQQQQQQQQQQLQQQKMRLQQLALVNVKAGNPAMAAAAAYQAKMVSGAVDAMGMTGGRAVLPDAQQLLYMQQRQKQQQQQQQQQQFTQQRQPAPKQAPSLAHQTSAQQAKKAGAKASSQAAVQRGIDLDVLARTMVLETTGSPLVPSHNAPKPRQQEPAKPPKATKAAKAGDANAASLAQRARGLSQTDIFSQEQIARQYAMSDEPERKVFLDGYFEHLRSMGGPITRIPVMGSNDVDLYKLYKVIEMFGGLQGVITNKRWKEVIREMNIPDSITSASFNLKQHYVKYIDPYLKKASVACPRLCLCCYRKEAERKKESEPVDPLVGIERAEEFVPLEPSVTRNSIGPWDADRVLLALRSGLTAETTWALNVLTVIMHDNGMPVFLVQQPELLSTIVEHQQHYLAVLELAQGAGATSDGGDGDADGSPNVHWRKPLSAFEGHSSLVFSHIPVGRYRLSPMIRIDLGMHDDAIALVDPTAASRKKRRTPEGESAVYPKSKRRRFAVLPRDENDSLSVSSSTAMGAVVASNNETGITQSTEAEVGVDVLGGGSDDLLFAGHRHGSGYRGIEWIAVERIRCISNILRALSFVWQNEAFLGSHEGAVALAIDGLHCDDWDHVDDSLVFLANVAAHIDLSAMSTNRTSTQRLVAGIVRVIDHYGGFVLEFGYDANANRTGDDTDPMGLEVTTVDALLVNSFDRETQELGVLLETLAKLSLSETNVKMIGLAVPADLDRMLQWLAQRLVAPDAVVRETAVFVLHNLVSSASMLRSKIGAQAGCIPLLLATVTDTLPNGIASPPDVRARAASALLSLAGSTANRTLISRGEKELLALVVHSSTRKELGDAVSAILYELAFA* # ORIGINAL: g13025.t1 original gene structure, not modified by PASA NODE_1063_length_14316_cov_42.7536 AUGUSTUS gene 150 3474 . - . ID=g13025;Name=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS mRNA 150 3474 . - . ID=g13025.t1;Parent=g13025;Name=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 3200 3474 . - . ID=g13025.t1.exon1;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 3200 3474 . - 0 ID=cds.g13025.t1;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 2898 3010 . - . ID=g13025.t1.exon2;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 2898 3010 . - 1 ID=cds.g13025.t1;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 2369 2752 . - . ID=g13025.t1.exon3;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 2369 2752 . - 2 ID=cds.g13025.t1;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 150 1960 . - . ID=g13025.t1.exon4;Parent=g13025.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 150 1960 . - 2 ID=cds.g13025.t1;Parent=g13025.t1 #PROT g13025.t1 g13025 MDAAATSRPLDGRDLQKLSAQEWVDALQAAGNRPEDWLLFLEHSRKKYAPHPYATSFLIRAYDTATKKMAVDACRKNPTFARIWLDFVKLQCNVAQEDAKQTFKFMNNENLAKDSAEFYILWSQLEFDAGNKDKAKQVLNKGKEKRAMPESMLNRAFASLVNGERPSLDMASPPASAPADLQEVPQQQQQQQQQQQQQQQQQQQQQMHKRDSAVTSAIAAAPAPANPGASAQVQEKASSEEPALRRTSSDHGPPRPELSAPTAAPALQRSNSDALSKLSVAANENTGNHTANLTQNGIVGSQNGYPTPGPATNGKPPVKSILVSARRPSKPMRLLSTVASLSPPQRGIPSLALDGGEEGLELLSAETATGRNGDSRNGDTATVVHQVLPLQHAQDGGDGRYDMTHTPHYSQQQSQPQQQQQQQQLQPALQRRTSPETQGNFPLQTPMRVLSTLSHPTPTVGSTTSTSSSSGSGTTTNTTNTATSGHATGTYNGATLNSNALGFPSNSTVMAPPPAAATRQLPSFSNGPAQPIGHYQQQQPQQPRDQPSHATSTTEQRHHQGISAVPPPTSHSQPSASANAGLHQQQGTAAMPSSAHSVALSNGGVPPLEASVARKPRVNFAPAAAPPNSASSHTPGHPQQQQQHAQYSQSSHASSAGEIIVNGRSYARLEVLGKGGSSKVYKVIGPDRRVYAIKHVRLDNTDEATIESYINEIVLLNRLQGKEGIIRLFDSEVNRGDGYIYLVMECGDVDLARLLKKHEGGRAPLSGNHVRLYWQQMLEAVGTIHGERIVHSDLKPANFLVVEGALKLIDFGIAKAIQQDKTSVERESQIGTINYMSPEAILDTSQVPRRDASARHVQCMK # ORIGINAL: g13028.t1 original gene structure, not modified by PASA NODE_1063_length_14316_cov_42.7536 AUGUSTUS gene 12836 14079 . + . ID=g13028;Name=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS mRNA 12836 14079 . + . ID=g13028.t1;Parent=g13028;Name=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 12836 12923 . + . ID=g13028.t1.exon1;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 12836 12923 . + 0 ID=cds.g13028.t1;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 13103 13186 . + . ID=g13028.t1.exon2;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 13103 13186 . + 2 ID=cds.g13028.t1;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 13300 13391 . + . ID=g13028.t1.exon3;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 13300 13391 . + 2 ID=cds.g13028.t1;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 13624 14079 . + . ID=g13028.t1.exon4;Parent=g13028.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 13624 14079 . + 0 ID=cds.g13028.t1;Parent=g13028.t1 #PROT g13028.t1 g13028 MTLTRAHVTPMPVTIGVLALQGAFIEHVHVLATLPNVATREVRIAAQLDEIDGLIIPGGESTTMALVAERSGMMEPLRRYVAGNRPVWGTCAGMILLSNSALHTKRGGQSLIGGLDATVDRNHFGTQLQSFEADLRVPDIGDAPFHAMFIRAPVLVAVGDGVRVLCELSSGLDKGPGKENTREIVAATQNNILATAFHPELTHDHRWHELFVGIARKAKVAALSHATYATTPHATADVV* # ORIGINAL: g13027.t1 original gene structure, not modified by PASA NODE_1063_length_14316_cov_42.7536 AUGUSTUS gene 10771 12359 . - . ID=g13027;Name=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS mRNA 10771 12359 . - . ID=g13027.t1;Parent=g13027;Name=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 11942 12359 . - . ID=g13027.t1.exon1;Parent=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 11942 12359 . - 0 ID=cds.g13027.t1;Parent=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 11619 11809 . - . ID=g13027.t1.exon2;Parent=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 11619 11809 . - 2 ID=cds.g13027.t1;Parent=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS exon 10771 11286 . - . ID=g13027.t1.exon3;Parent=g13027.t1 NODE_1063_length_14316_cov_42.7536 AUGUSTUS CDS 10771 11286 . - 0 ID=cds.g13027.t1;Parent=g13027.t1 #PROT g13027.t1 g13027 MSNKGSAAFAAAIAEGRRRSPRIARAVPVLSEIKQEDFKGDAHTNDATATVHDPPTRVTPKDEPISTFKVEHTEPPSPHRTPVRRKRIDVEYEDASINARQTPDDKGSASVEPSPAKTEASDGVRSSGPSPAKKMRKMKEIPIISPPAVWQQQLANIVEMRKGRTAPVDVVGCEVLPEKGCDPKTYRYQVLLSLMLSSQTKDEVTGAAMGRLKAHGCTVAHILSTSEEALGKLIYPVGFWRTKAKHILLSSRVISTDYGGDIPDSIEGLMSLPGVGPKMAHIAMNVAWNRAVGIGVDTHVHRISNRLGWVKTEEAEQTRVALEHWMPREHWPHINLLLVGFGQELCQPLRPKCDRCLNAELCPTGRKECKSQKK* # ORIGINAL: g1809.t1 original gene structure, not modified by PASA NODE_1778_length_9301_cov_40.228 AUGUSTUS gene 6178 6940 . + . ID=g1809;Name=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS mRNA 6178 6940 . + . ID=g1809.t1;Parent=g1809;Name=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 6178 6266 . + . ID=g1809.t1.exon1;Parent=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 6178 6266 . + 0 ID=cds.g1809.t1;Parent=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 6386 6510 . + . ID=g1809.t1.exon2;Parent=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 6386 6510 . + 1 ID=cds.g1809.t1;Parent=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 6654 6940 . + . ID=g1809.t1.exon3;Parent=g1809.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 6654 6940 . + 2 ID=cds.g1809.t1;Parent=g1809.t1 #PROT g1809.t1 g1809 MEADIAGLKAIVADGEEQLKALLNKKIAMETDFAVNMRNIAKSIRESVPFVSMIAPRDHAQVVPHSQPATTGNPDDSDGLHDRRTRKRTHDDMMGGDTATSQGSMADALEPTTGECIGYITALENTAPIHDNCEAGVIAMDVDPMASECANDDGAGVSTDAAVPVV* # PASA_UPDATE: g1808.t1, single gene model update, valid-1, status:[pasa:asmbl_2598,status:12], valid-1 NODE_1778_length_9301_cov_40.228 . gene 880 4530 . - . ID=g1808;Name=g1808.t1 NODE_1778_length_9301_cov_40.228 . mRNA 880 4530 . - . ID=g1808.t1;Parent=g1808;Name=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 4505 4530 . - . ID=g1808.t1.exon1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 4505 4530 . - 0 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 4075 4265 . - . ID=g1808.t1.exon2;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 4075 4265 . - 1 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 3755 3870 . - . ID=g1808.t1.exon3;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 3755 3870 . - 2 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 3616 3644 . - . ID=g1808.t1.exon4;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 3616 3644 . - 0 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 3225 3446 . - . ID=g1808.t1.exon5;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 3225 3446 . - 1 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 2868 3017 . - . ID=g1808.t1.exon6;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 2868 3017 . - 1 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 2441 2668 . - . ID=g1808.t1.exon7;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 2441 2668 . - 1 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 2187 2295 . - . ID=g1808.t1.exon8;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 2187 2295 . - 1 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 1939 2037 . - . ID=g1808.t1.exon9;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 1939 2037 . - 0 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 1703 1790 . - . ID=g1808.t1.exon10;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 1703 1790 . - 0 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 1296 1379 . - . ID=g1808.t1.exon11;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 1296 1379 . - 2 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . exon 880 1167 . - . ID=g1808.t1.exon12;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . CDS 1034 1167 . - 2 ID=cds.g1808.t1;Parent=g1808.t1 NODE_1778_length_9301_cov_40.228 . three_prime_UTR 880 1033 . - . ID=g1808.t1.utr3p1;Parent=g1808.t1 #PROT g1808.t1 g1808 MMIDSDEDRPAPTTRRSSRGTGSQPRHPFTVDDNHDVDMDERSNSPNALRQQKLDRQRQLEDQRRKQRQSAAGMVFNTEGDGRRPSSAARRQPSAKSRRDDRDRDRDEAPQPRFSSGGSSRDYERDRERDRDRESRVDREERESRARDSRDSRDRESRDSRPSRTRGAPETTVVRSYDSDDEQPARDIQRELQSRGISTTYDPRDEADADEAPIQPQPSEGNARQRATSMSIDINDENLLDFVTQPGPQGHKILCRITRDKKGLEKGMYPTYYLHMEREGGKKVFLLAARKRKKSTSSNYLLSIDPTNMARDGETFVGKLRSNFLGTNFIVYSNGCNPRSKKAMNGNIREELAAITYGTNVMGLKGPRKMTVIIPGMKSDGRRVSIRPTSESEGMLEKAKRHQLKDILILHNKSPVWNDETQSYVLNFHGRVTVASVKNFQVVHDDDPDYIIMQFGRISDEVFTCDFQYPMSAIQAFSIALSSFDGKLACE* # ORIGINAL: g1810.t1 original gene structure, not modified by PASA NODE_1778_length_9301_cov_40.228 AUGUSTUS gene 7489 9216 . - . ID=g1810;Name=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS mRNA 7489 9216 . - . ID=g1810.t1;Parent=g1810;Name=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 8613 9216 . - . ID=g1810.t1.exon1;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 8613 9216 . - 0 ID=cds.g1810.t1;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 8154 8292 . - . ID=g1810.t1.exon2;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 8154 8292 . - 2 ID=cds.g1810.t1;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 7800 7943 . - . ID=g1810.t1.exon3;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 7800 7943 . - 1 ID=cds.g1810.t1;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS exon 7489 7612 . - . ID=g1810.t1.exon4;Parent=g1810.t1 NODE_1778_length_9301_cov_40.228 AUGUSTUS CDS 7489 7612 . - 1 ID=cds.g1810.t1;Parent=g1810.t1 #PROT g1810.t1 g1810 MDVMFSDSATQFDRKLRPLLNTIVTSSRAVREAREKKRDALRAIEEEREKDRLKRMESQQGRQKDPRKQQPQLRDGEQEQPQQPQQQEQQQQLHAVPHRPLSLKVSKAFSIISQDGSPPQLEADDAWMQSGSAEDDEEKAVRVMVMGLPNVGKSSFINAVRRLYTGGANAAITGGVPGVTRSVNTAIKISTNPRVYVIDTPGIMMPRVGDYEQGMKLALVGTMLDDVVGITNIADYLLYTLNRKGVFTYVDIFSLRGPSDDISEVLPQVAARMGKIKKGGLYDLPAAAVQFVLAFRGHVPKSGRRWREKGDGDGDEEEEGYEGEGRRGCGGQLWSP* # ORIGINAL: g381.t1 original gene structure, not modified by PASA NODE_1030_length_14551_cov_51.657 AUGUSTUS gene 4246 5325 . - . ID=g381;Name=g381.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS mRNA 4246 5325 . - . ID=g381.t1;Parent=g381;Name=g381.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 4246 5325 . - . ID=g381.t1.exon1;Parent=g381.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 4246 5325 . - 0 ID=cds.g381.t1;Parent=g381.t1 #PROT g381.t1 g381 MASGISSLPFEVFAAHVAPFLSHGDIASLSRTCASLRSLLHGLCTFNLRRRFAVEMYSDHAFRSLVLAAFPKDRLGVNLSFLKNVNDVSAFGGVLALDLSFCVGVVDVSALSRVHTLTLRGCTSVADVSALSGVHTLDLSQCRAISDVASLGDVHTLNLSGCIGVVDVSALTNVYALNLSGCIRVADVSALGGAHTLNLTGCGIADVSALGGVHTLDLSRCNEVVDVSALGGVHSLNLSDCRRVVYASALGGVHTLNVSGCHELSVNLSVFGGVHTLDLSNCSTVSDVSALGGVHTLNLTGCGGVMDVSALGRVHTLNLSRCISVVDVSALGGVHTLDLRFCSGVADVSALGGVHKLYK* # ORIGINAL: g382.t1 original gene structure, not modified by PASA NODE_1030_length_14551_cov_51.657 AUGUSTUS gene 6617 9557 . - . ID=g382;Name=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS mRNA 6617 9557 . - . ID=g382.t1;Parent=g382;Name=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 9191 9557 . - . ID=g382.t1.exon1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 9191 9557 . - 0 ID=cds.g382.t1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 8558 8739 . - . ID=g382.t1.exon2;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 8558 8739 . - 2 ID=cds.g382.t1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 8041 8277 . - . ID=g382.t1.exon3;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 8041 8277 . - 0 ID=cds.g382.t1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 7615 7926 . - . ID=g382.t1.exon4;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 7615 7926 . - 0 ID=cds.g382.t1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 7071 7229 . - . ID=g382.t1.exon5;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 7071 7229 . - 0 ID=cds.g382.t1;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 6617 6772 . - . ID=g382.t1.exon6;Parent=g382.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 6617 6772 . - 0 ID=cds.g382.t1;Parent=g382.t1 #PROT g382.t1 g382 MPMLRQAAKDLSFHNLIRQWQDEYGPAFTFSSPFATVVCFSNPDITRRVLEAPHDEFQANANFATAFKTVTNGLLIMYGDEWKRHRRLVQPAFYPNHLKSVCTISDRRVGRMLGEWDVAARKGEAVELTVDFSNLTADVIGMAAFGTEFSEKAGDATTLKHAVRALTIGVERRVSLPPFMWKMILTDHKEFAASTKIVHDYLHAVLEERIALRERESEGNSEPTKDKDLMDLLIAGRDGTEDELSLNEILEELIMFFISAHSSAFPLTPVHLAGHETTSNTLCWALYCMALYPHLADRLAAEAVEVLGADYPLPPSESGFDYGRLSDLRYTEAFIKETLRLYPVAAFTARQAVKDTVIDGVPIANGTVVFVHLSHTHRDPKLWSDAETFDPERWDESQPLPRPGSYLPFGHGPKSCIGQKFAMVEMKVIMSQIARRFSVRIAPDQKVESAMSITINPKHGLRVILTPRNN* # PASA_UPDATE: g380.t1, single gene model update, valid-1, status:[pasa:asmbl_114,status:12], valid-1 NODE_1030_length_14551_cov_51.657 . gene 324 2552 . + . ID=g380;Name=g380.t1 NODE_1030_length_14551_cov_51.657 . mRNA 324 2552 . + . ID=g380.t1;Parent=g380;Name=g380.t1 NODE_1030_length_14551_cov_51.657 . exon 324 392 . + . ID=g380.t1.exon1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 324 392 . + 0 ID=cds.g380.t1;Parent=g380.t1;5_prime_partial=true NODE_1030_length_14551_cov_51.657 . exon 531 611 . + . ID=g380.t1.exon2;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 531 611 . + 0 ID=cds.g380.t1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . exon 779 895 . + . ID=g380.t1.exon3;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 779 895 . + 0 ID=cds.g380.t1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . exon 1102 1242 . + . ID=g380.t1.exon4;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 1102 1242 . + 0 ID=cds.g380.t1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . exon 1434 1634 . + . ID=g380.t1.exon5;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 1434 1634 . + 0 ID=cds.g380.t1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . exon 1980 2552 . + . ID=g380.t1.exon6;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . CDS 1980 2300 . + 0 ID=cds.g380.t1;Parent=g380.t1 NODE_1030_length_14551_cov_51.657 . three_prime_UTR 2301 2552 . + . ID=g380.t1.utr3p1;Parent=g380.t1 #PROT g380.t1 g380 QLEAVTLASNSLRLSRKLQKVLEVILAFGNYMNSAKRGGVYAFKLNVLDRLADTRSIDRNYTLLHFLEDTVAVQFPDCATWAGELVQLGGAAAVSMPTSAADVSALRKGVALAQKELELTPDSQILAEFVASVAAQVDAVERDHVTMVAAFKETVGLFGEAPDTTEPGEFFGIFSRFATAYHKAKEENAAARAKRLAEQQKKEALALAQAAPAAAAPPSKAPNKKGTVGRDNFEMYDGAIDDLIKEIKSSTFRNSVHQRRKKTPTAGEMSPSAAQESAGGTVVRAVTRPQRPARPSPAALIAASLTTEH* # ORIGINAL: g383.t1 original gene structure, not modified by PASA NODE_1030_length_14551_cov_51.657 AUGUSTUS gene 11039 11964 . - . ID=g383;Name=g383.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS mRNA 11039 11964 . - . ID=g383.t1;Parent=g383;Name=g383.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 11369 11964 . - . ID=g383.t1.exon1;Parent=g383.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 11369 11964 . - 0 ID=cds.g383.t1;Parent=g383.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS exon 11039 11144 . - . ID=g383.t1.exon2;Parent=g383.t1 NODE_1030_length_14551_cov_51.657 AUGUSTUS CDS 11039 11144 . - 1 ID=cds.g383.t1;Parent=g383.t1 #PROT g383.t1 g383 MTAVFSSLGLIAVVLFCLHQSCAQQASPHDKSHSGVHSQRETFSTPTYRAHTSTLFADIIGNTCTLHPAHLTETKKPLWDDMSYVTTSPRDFPGDGFVPFPSDMATVEERFHHSVCDPDSGLTASFYDHSFAASQRADEADMNTLDADERFNTGSPQKKPTHVHLAPLPDHVTRDELDANRAEELMDEAPGALYEALERAEKAGNDLSFSADATSRSGTASYAETHSGVYEDD* # PASA_UPDATE: g9736.t1, single gene model update, valid-1, status:[pasa:asmbl_2381,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 52771 54949 . - . ID=g9736;Name=g9736.t1 NODE_16_length_66263_cov_43.7954 . mRNA 52771 54949 . - . ID=g9736.t1;Parent=g9736;Name=g9736.t1 NODE_16_length_66263_cov_43.7954 . exon 54868 54949 . - . ID=g9736.t1.exon1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . CDS 54868 54949 . - 0 ID=cds.g9736.t1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . exon 54525 54679 . - . ID=g9736.t1.exon2;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . CDS 54525 54679 . - 2 ID=cds.g9736.t1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . exon 53936 54043 . - . ID=g9736.t1.exon3;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . CDS 53936 54043 . - 0 ID=cds.g9736.t1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . exon 53607 53746 . - . ID=g9736.t1.exon4;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . CDS 53607 53746 . - 0 ID=cds.g9736.t1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . exon 52771 53372 . - . ID=g9736.t1.exon5;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . CDS 52805 53372 . - 1 ID=cds.g9736.t1;Parent=g9736.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 52771 52804 . - . ID=g9736.t1.utr3p1;Parent=g9736.t1 #PROT g9736.t1 g9736 MANSDWHTTALLSKYTKNEIELAMRNHGFFESMKYDLTPAGLHYLLIHFDIPRISEDGYRLNIGGLVSNPLSLSLDDIKAIGTSMWTGTPLGPLLKEAGLDSSAVEILFTGKDKGGGEIQYFQRCLNIAEATLDGVILAYEMNGQPLLPQHGFPLRLIVPGWYGMTSVKWLDRIEAIAAPFNGYQMRAYTYRTCEADPGVRVTLQRVRSLMVPPGIPDFFSRQRLVEAGPVELEGRAWAGRRSISHVVVSTDGCRTWSEAKLGASIGSHAWVRWTFMWKATPGRHVLSVRATDDHGDEQPLEQFWNLYNMANNVVQRLEVKVCDKLEEGARAPIDPPRFDPEGHDARARL* # PASA_UPDATE: g9735.t1, single gene model update, valid-1, status:[pasa:asmbl_2370,status:12],[pasa:asmbl_2371,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 50429 52668 . + . ID=g9735;Name=g9735.t1 NODE_16_length_66263_cov_43.7954 . mRNA 50429 52668 . + . ID=g9735.t1;Parent=g9735;Name=g9735.t1 NODE_16_length_66263_cov_43.7954 . exon 50429 50554 . + . ID=g9735.t1.exon1;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . CDS 50429 50554 . + 0 ID=cds.g9735.t1;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . exon 50643 51096 . + . ID=g9735.t1.exon2;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . CDS 50643 51096 . + 0 ID=cds.g9735.t1;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . exon 51270 52668 . + . ID=g9735.t1.exon3;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . CDS 51270 52552 . + 2 ID=cds.g9735.t1;Parent=g9735.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 52553 52668 . + . ID=g9735.t1.utr3p1;Parent=g9735.t1 #PROT g9735.t1 g9735 MDVISKNALTDPALSLSGLQRFNRENASSTSFAHAGTPDDKKNFIHMGLRILSLGLSEGAFSNDDEKHPLPELWRSPVARREWLESLRILSRERISLEALHSVAGFTVLMRCAGLVPSSPVQVDESAPGRPTPNQPTGSSAATSEEAAVELESLRCIYNGVFQNTPNLGLFHSLGGVQQLVWRMGSLPRAMERATCAFLIRLLFVITAVHEPSRDAFLSVGGVAAVVGRVSVSLLSRRTSTNHPTTHLANEDIAIASDGLRTLFNVSVPPSDDIDADGGNARGHSVFSSVLALLRAIILGDHAPIQQADAALEIRRGVVHLLTNLPSDLAKQLVFGDAGPSPPAADLRAQKKADELRAAPIARGLLDLYTALLDDQRNAGSSLSESISPIVVVLRNLSRNCSAFRRLLERELVPHRTGEQLAVRPELGDTLAARTVALMTGSSHDVQRLSAELLYVLCRENLARVVKATGYGNAAGLLASRGLFGGSLIDHSGGGYSSTDSEDESDSEDESDSEEEGSGSSDAARVRGGATARDMDAHVNPITGALDGGFNGDMPGVMNMRDVFAGMTEEEKEAEAERLGELFDRLNRNGLIRAVPVGPNGKPVEDHPGFGGPTEPPARR* # PASA_UPDATE: g9728.t1, single gene model update, valid-1, status:[pasa:asmbl_2377,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 7169 8187 . - . ID=g9728;Name=g9728.t1 NODE_16_length_66263_cov_43.7954 . mRNA 7169 8187 . - . ID=g9728.t1;Parent=g9728;Name=g9728.t1 NODE_16_length_66263_cov_43.7954 . five_prime_UTR 8116 8187 . - . ID=g9728.t1.utr5p1;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . five_prime_UTR 7811 7876 . - . ID=g9728.t1.utr5p2;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . exon 8116 8187 . - . ID=g9728.t1.exon1;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . exon 7792 7876 . - . ID=g9728.t1.exon2;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . CDS 7792 7810 . - 0 ID=cds.g9728.t1;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . exon 7169 7709 . - . ID=g9728.t1.exon3;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . CDS 7501 7709 . - 2 ID=cds.g9728.t1;Parent=g9728.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 7169 7500 . - . ID=g9728.t1.utr3p1;Parent=g9728.t1 #PROT g9728.t1 g9728 MEPCSKRLSGNTPCAQLIRDAQIGRVVVGVREPDHFVRHCSGIDDLCRGGTRVDLLEGFEEACLAPNNHLLAPRR* # PASA_UPDATE: g9731.t1, single gene model update, valid-1, status:[pasa:asmbl_2366,status:12],[pasa:asmbl_2367,status:12],[pasa:asmbl_2368,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 27007 38245 . + . ID=g9731;Name=g9731.t1 NODE_16_length_66263_cov_43.7954 . mRNA 27007 38245 . + . ID=g9731.t1;Parent=g9731;Name=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 27007 27233 . + . ID=g9731.t1.exon1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 27007 27233 . + 0 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 27335 27422 . + . ID=g9731.t1.exon2;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 27335 27422 . + 1 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 27530 27746 . + . ID=g9731.t1.exon3;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 27530 27746 . + 0 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 27879 27942 . + . ID=g9731.t1.exon4;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 27879 27942 . + 2 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 28050 28292 . + . ID=g9731.t1.exon5;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 28050 28292 . + 1 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 28408 28775 . + . ID=g9731.t1.exon6;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 28408 28775 . + 1 ID=cds.g9731.t1;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . exon 28899 38245 . + . ID=g9731.t1.exon7;Parent=g9731.t1 NODE_16_length_66263_cov_43.7954 . CDS 28899 38245 . + 2 ID=cds.g9731.t1;Parent=g9731.t1 #PROT g9731.t1 g9731 MSVTPKLKSPMEGSTSLPPLNPAGQRSVVVGGGASSSGARGTLGGSLFTKVVDGRETLTNTFSLRDEFDKTLMTIIQEKAVASIKTTERHTKRSPHVTPPELPDELKPSERQQRKTYYEFMKQRVMVETVSPLDDDTYSRITALVPAVLRTKKTVDVQKTLGFEIRAEYEESIKRSMVQFKLKSLEEEYSHSLLYKTLSPFYEHPERSRQGFRDACAVIRRELFVTHPYMRQLLFMWHKYDALRLVDVQRIRSPAAVDTQAFNTKMAIGRDKIEQRLLDGWHSEVLNLFCNIEGISIEESRLGQFYDTATVLMSNQLRGMLMNSMADYEQLFVRGERNTMPVFSLRLVIDNNHVRFEPSLLDLETVVLDVFDLISGSLQRIGEVKAELNVLDAVENDGPSWIDAAIAPSVVTAFKDSVRRAFHEQLQETKDHLQVYDKYSFLFSDEASQGVRTFITSEHTFEEYVEEIERFRNISREIKSNPNNLFFDVTHVNCDEAKSALSEKALEHANKLIERCLQDHRDKSIAICDRYDRISERALTVPVDTKDMIDLMSYIEGVREREQQDLFLAVTEARRRLQYLIEVRSLAKGDFELNTRTLTWPHRLEPIFEQNARIIMEARTKGERSLLERRDMVQNSLDACAARLEKFNSCGDINEMVEYAKEIQALQKRITDLSEDITRINFEERLFEWQQTSYPSLQTITTTLQPFQKLYSCAIKWRKSQRGWMDGSLLTMNPETVESDVEEFWREIYKVSKAFPENSAPFQLAETIKAQITEFKSFIPIIQVLCNRGIRKRHWEKMSEIVGVDITPDSTTSLTKMLKLDLQPHMEQFQAISDAATKEYSLEKAMEKMKSDWDPIEFVLHEYRDTGIHILSGVDDIQSVLDDQIVKTQTMSGSPFIKPFEKEVKEWEMILLNVQEIIDEWLKVQSQWLYLEPIFSSEDIMRQMPEEGRMFRQVDSTWRAVMINCAKDTHVLVATTMPYLLKRLRESNAMLDQINKGLNEYLEIKRLYFPRFFFLSNDEMLEILSETKDPMRVQPHLKKCFEGIASLGFTKDLEINAMYSSEQERVDLSGVVSTAAAKGNVERWLLQVLDLMKVSLRDVIGQSVKAYAADTRKDWVLNWPGQVVLCGSQIFWTLEVHEAIRAGNKGLRKYHAKLTHQLEDIVDLVRGRLPMLNRITLGALVVIDVHARDVVKDLVDKNVETEDDFQWLSQLRYYYEGGDIKSRMINATVQYGYEYLGNTPRLVITPLTDRCYRTLIGAYHLNLGGAPEGPAGTGKTETVKDLAKALAKQCVVFNCSDGLDYIAMGKFFKGLASTGAWSCFDEFNRIDLEVLSVIAQQILTIQRAIQMKLAMFNFEGTDLKLDPTCSVFITMNPGYAGRSELPDNLKVLFRTVAMMVPDYAMIGEISLYSVGFVQARSLSVKIVTTYRLCSEQLSSQYHYDYGMRAVKAVLAAAGNLKLKYPQEDENILLLRSIMDVNLPKFLAHDVPLFRGIISDLFPGVVLPALDYNIFRDAIADVCKRDNLQLVPVFLEKIIQTYEMMLVRHGFMLVGGPFAGKTEVIKVLSGALTDLATRNLIGERKVQYKVINPKAITMGQLFGQFDPVTHEWTDGIVANAFREFSSSTAPDRKWVVFDGPVDTLWIESMNTVLDDNKKLCLMSGEIIQMSDSMSLIFEVNDLSQASPATVSRCGMIYMEPSILGWQPLVTSWFARLPEFVTERQRTAIRLMIDAYVPLGLAVVRRDCKEVSPTSDSNLVRSMMNIFDALLAQIGEKEVEENVALTWITCSLAFAIIWSVGGSVDYEGRKKFDKLFRTMSTSTEADYLRLRESFDIDTTNARPCRIEVPIPDKGMVYDYTFLRDGRGRWAMWTDSIEQDLHYPANTKVSEIIVQTMDTARYTYLMDLLIGLGKPLLFVGPTGTGKSVYVKNKLMNGLTQDKYIPVFVNFSAQTSANQTQDIIMSKLDKRRKGVFGPPLGKKCVIFVDDLNMPAREVYGAQPPIELLRQYLDHGNWYDRKDTSRISLIDIQFVAAMGPPGGGRNPVTQRFLRHFNMVSITPFEDDTLQRIFASVIRWYFTVNEFSGTLQIPGAQIVTATMEVYKAAMQNLLPTPAKSHYLFNLRDFARVVRGVLLVKPATVDNKQKLIRLWVHEVYRVFYDRLTEDMDRVWLHHTLKEITQRQFGEKFDGLFRHFANSSGEVTNEDMRSLLFGDLMATGQEDAPYDEVTDLKALNAVVVKSLDDYNQTHKATMNLVIFRYVLEHLSRIGRVLKQAGGNALLVGVGGSGRQSLTRLAAHMADLEVFQPEITKSYSKVEWRDDLRRVLRNAGLKEKKTVFLFNDTQVKDESFLEDINNLLNTGEVPNLFPPEERQEIIDALRARQYQINAAADFSPLSLFNFFVDCVKDNLHIVLCMSPIGDAFRNRLRQFPSLINCCTIDWFEAWPEDGLEIVASQFLTDVEMTDSVREAVIRVCREFHQSNRHLSQRFLDTLGRHNYVTPTSYLELISSFKTLVGRKRDEILRQKRRYEVGLERLQFAATQVAEMQRELEKLKPKLETSQEENARMIKVIEKDSAAVETKSEMVRREEAIANSQADAARELKDECERDLSEALPALEAALAALNTLKPADITIVKSMKNPPAGVKLVLEAVCVMKDIKPAKIPDPAGTGEKILDYWGPSVKMLGDLKFLDSLKAFDKDNITVAIMKKIRTDYIPNPEFVPDKVKNASSAAEGLCKWIRAMEVYDRVQKVVAPKKERLNEAEQTLAETMKKLNAKRAELQEVEGKLTALKNNFAEMVATKEQLEFQVDLCERKLDRARKLIGGLGGEQDRWGVAAKALDGVYSKLVGDVLISAGVIAYLGAFTAEFRRDCTTEWTALCKSMGIPCSSEYSLGRTLADAVTQRAWVIAGLPNDSFSIDNAIVVANARRWPLMIDPQGQANKWIKNLERENKLHVIKLTDNDYMRTLENCVQFGNPVLLENVGEELDPSLEPLLLKQTFKQGGVTCIRLGDSTLEYSKDFRFYITTKLRNPHYMPELATKVTLLNFMITPGGLEDQLLGIVVAKERPELEEEKNALIMQSAANKKQLKEIEDKILETMSSVEGNILEDESAIQILSSSKVLSDEISLKQAVAEETEKKIDQSRAGYRPIANHSSTLFFSIADLANIDPMYQYSLNWFINLFLLSIEQSNKSKVLDRRLRYLSDHFTYSLYCNVCRSLFEKDKLLFSFLLCYNIYRAKGEISVDDFQFFITGGVDLENPHPNPDKTWISDKMWDRLCRMSELTSFRGFRESFVKSMGAWRQYSQHKEPHKETLPEPWNARLSDFDRMILLRCLRPEKVPHVISDFVEARLGKRFIEPPNFDLEKSYFDSNNSSPIIFVLSPGADPMAALLKFAELKGMSSSKFQSISLGQGQGPVANRMIKNGTKDGNWVVLQNCHLAVSWMPTLEKICEELRPDLVHPDFRLWLTSYPSDKFPVSVLQNGVKMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVADELSV* # PASA_UPDATE: g9729.t1, single gene model update, valid-1, status:[pasa:asmbl_2365,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 8984 22106 . + . ID=g9729;Name=g9729.t1 NODE_16_length_66263_cov_43.7954 . mRNA 8984 22106 . + . ID=g9729.t1;Parent=g9729;Name=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 8984 9010 . + . ID=g9729.t1.exon1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 8984 9010 . + 0 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 9174 9293 . + . ID=g9729.t1.exon2;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 9174 9293 . + 0 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 9410 9621 . + . ID=g9729.t1.exon3;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 9410 9621 . + 0 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 9717 9915 . + . ID=g9729.t1.exon4;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 9717 9915 . + 1 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 10024 10286 . + . ID=g9729.t1.exon5;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 10024 10286 . + 0 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 10415 10654 . + . ID=g9729.t1.exon6;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 10415 10654 . + 1 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 10766 11372 . + . ID=g9729.t1.exon7;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 10766 11372 . + 1 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . exon 11485 22106 . + . ID=g9729.t1.exon8;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . CDS 11485 21945 . + 0 ID=cds.g9729.t1;Parent=g9729.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 21946 22106 . + . ID=g9729.t1.utr3p1;Parent=g9729.t1 #PROT g9729.t1 g9729 MADMDTRMLDRVRTNESVVTFKDRSGSPDNGPTSEAQKFVLPPIGAVDMFGKSRTASKTYPPVLKHKSWTKASPWKEERHFHRISDSIGNNYSPAAQELNMKAVASMQKLGASASLSPMPGHARPKSPGNRTLDPVGHAHTLDLVVSTRSAADPYTAAEQLSIGHQDKMSTYGLSRPVTPAERDQDRYWYYVENGIDDDAVSPLDEQWIENTIARVSRVARDGTDQSLLVEQLVAEMTADYTVSLKKSILDYVLRDAEEQARLRIAVPPRATERLRESHYPWHTSVEDSRKYLTDNLHANHEIMLDVLRTWCDISHVRLIGLPDLRRNMPCKISAFETFMREARNSARAQLMEGWVKRLVAIFQEKKSLWQGLATPGPEQETGFLRLDAFFASVATLMSNLLRAIVRMSVSDFGSFFEEEAQRAALDKDIYPPILHVALEIDGTGIKVEPSFAKIESTVLRVYDEMVKAVADFSRVECHLFASLANERLFLSGDCSEEDGSRIVRKTTKQILVAAAEPCARHIERYAVYRHLLNGQAEKRLKDFFRGDHTLEEYGAEIQRFKALSEEILALSHHVPLGIVLLDCEALNTELSSRALTLADRVLDNVIGTNKTANASICKQYEQISVRASLVPNSTEEVVGLMEYIEAVRNHEMASLQDELNHAQERLTFLLDHAQLSEEDIELNAKTFTWPLRVEPVLAAALNRMASQKEKAGKDLSKRVDVFKASLSGLADEVRRFREYEVMAEMDTYIAELADLQRRLDEADRAVLAINREEELLATERTSYPMLAQISTEIEPYQKLWTTMAEWQSKYERWMKGPFLELVPESIEADTSNMWRLMYKLTKTFVDVPGPLRVAESMKKQLDKFKSYTPIITTLRNQGLRPRHWEKMEDIAGVSLKPDPSTSLSHLLDKNVAKIMDKLDEIGEIASKEFSLEKALEKMKEEWAPIEFGVLAYRDSGTHILSAVDDIQTLLDDHIVKSQTMMGSAYCKPFEGQIRAWETTLRRIQDSIDAWLKVQATWLYLEPIFGSEDIMRQMPAEGKRFKSVDKTWRDTMAHTVKNTKVLVVMSMSGLLERLVECNEQLDRIQKGLNDYLEKKRLYFPRFFFLSNDEMLEILSETKDPLRVQPHLKKCFEGIGTLDFTDTLKIVAMLSSEGERVAFTDIIEPAKAGGQVEKWLLEVEHAMHGSMVRSVSESIKDYAKKPRERWVLDWPGQVVLCCSQVYWTLEVHEAIKTRGGLSTYRAKCSKQIDNIVALVRGNLQPLERITLGALVVIDVHARDVVAKLADEGVSDENDFEWISQLRYYMQDDVAIVRMINAGLKYGYEYLGNTPRLVITPLTDRCYRTLIGALHLNLGGAPEGPAGTGKTETVKDLSKAVANKCVVFNCSDGLDYIAMGKFFKGLASTGAWSCFDEFNRIDLEVLSVVAQQILTIQRAVMANMATVLFEGTEIALKPTCSVFITMNPGYAGRSELPDNLKVLFRTVAMMVPDYALIAEISLYSVGFVTARGLAAKIVATYRLCSEQLSSQDHYDYGMRAVKAVLTAAGNLKLKYPDQVEDLLVLRSIMDVNLPKFLSHDIPLFRGIISDLFPGVVLPQPEYSRLTEAINDNIKKLQLQAVPYFIEKIIQLYEMILVRHGLMLVGMPFGGKSAAYKVLSGALSDLADKGVPGERRVKFRVINPKSITLGQLYGQFDPVSHEWTDGVLATKFREFSSQPNNERKWLIFDGPVDAIWIESMNTVLDDNKKLCLMSGEIIQMSDSMNLIFEPMDLAVASPATVSRCGMVYMEPHQLGWRPLVDSWLEHALPPLIGEAERKIIDALIEWLVGPCLAFVRKDCREYAVSTDANLVQSLLNVYHSSMDEFYAEDTSEMRPQQIHAWLEGLFIFSIVWSIGGTVDEDGRAKFDTFLRRLISGTHADHPKPKVVGLAKAQQPPEKGLVYDYLFVKQGFGSWTPWTDNAEAVSIPKEAEFGQILVPTMDTARYSFLMNLAINHNKPLLFVGPTGTGKSVLSNKNLAELNADRYKVVFVNFSAQTSANQTQDIIMSKLDKRRKGVFGPPLGKKCVIFVDDLNMPAKEFYGAQPPIELLRQWLDQGHWYDRKDTSKQELIDMQLVAAMGPPGGGRNEISARIMRHMHVVAMTTFDDDTMTRIFESILDWHFTTRGFDASYALLKRPIVAATMATYKAARLNLLPTPSKTHYTFNLRDFSRVVQGITLTPSSVMSSPAKLQRLWVHEVYRVFYDRLVEPGDRSWFFNFVRDATESHFKVKFDALMDRIATGAGGTTATEDDIRSLFFGDYIKPSAEPRIYDEIEDMDELTRVMEGYLEDYNALSKAPMNLVMFRFAIEHVSRISRVLKQPGGNALLVGVGGSGRQSLTRLAAHMSGYRLVSIEVTKSYSRNEWREDLKRIMQVAGVEGKVTVFMFSDTQIKDESFVEDINNILNTGEVPNMFANDERQQIIETMRPIIQAKNRGTEASPNAMYTFFVDRCRQNLHIVLCMSPIGDAFRSRLRQFPSLINCCTIDWFQPWPQDALQCVAAKFLDDVEMPPEVRTQVVTMCQLFHVSTRDLSARFLREQRRHNYVTPTSYLELIKTFKDVLRRKRTEVAQLKERYETGLEKLQFAASQVATMQKELEELKPQLILASAETKKMMETVQVESVQVEEKRNLVAKDEEIASVKAASAKAIRDECDKDLSEALPALEAALSALNTLKPSDISVVKTMKNPPSGVKLVLEAVCVMKNVKPDRKPDPSGSGRMVEDFMGPALKMLGDMKFLDSLKLYDRDNIPAPVMKRIREKYIPNAEFQPSLVKNASTAAEGLCKWICAMEVYDRVAKVVAPKKEALKKAEDELAVEMEMLNRKREELQQVEAKLAALQRDLDGLVAKKEDLEHRVDQCSQKLVRAEKLIGGLGGEKDRWSSTARSLQVIYNNLTGDILISSGMIAYLGTFTSIYRQACIDGWIKEFKDRGIPCSPSASLTTTLGEPVKIREWHIAGLPKDRFSCDNAIIVFNSQRWPLMIDPQGQANKWIKNLERENNLKVIKLTDSDYVRTLENAIQFGAPVLLENVGEELDPSLEPLLLKQTFKQGGVTCIRLGDSTLEYSPAFRFYITTKLRNPHYMPELSTKVTLLNFMITPDGLEDQLLGIVVAKERPDLEEQKNKLILESAANKKQLQEIEDKILEVLSASQGNILEDETAIQVLSSSKVLANEINDKQAIAEDTEKKIDATREGYRPIAKHSSTLFFSIADLTNVEPMYQYSLNWFINLFVASIRDSEKSDDVPTRLKHLRNHLTYSLYCNVCRSLLEKDKLLFSFMMCVDILRDAGEIDGAEWFFLLTGGIALETKMANPLSAWLSDKSWGEITRLSDFESFKGLAQHLAPNELKWKRLFDSPEPHKEPLPGDWDTKLSSFQKLLLLRCLRPDKIVPAVSEFVSEKLGRKYIEPPPFDLARTYLDSTACTPLIFILSPGADPMAALLKFAETKGMGGARIKSISLGQGQGPIAADMIKQATKEGTWVVLQNCHLAVSWMPTLEKICEEMTPENVHHDFRLWLTSYPSDKFPVSVLQNGVKMTNEPPKGLRANLLRSYLNDPISDQAFFDGCERASEWHRLLFGLCFFHAVVQERRKFGPLGWNIPYEFNESDLRISVRQLQMFINEYEEIPFKAILYMTGQCNYGGRVTDDWDRRTLVNILAIFLSSDLIDDDAFKFSPSGTYFAPADNGHMSYIEYIRSLPSVPLPEVFGLHSNADIAKDMQETQQLFQDILSTEAQTSSGSGGHSTDDIVNGVASDILARMPASFDMDAIGQKFPVTYHESMNTVLLQEVVRFNRLSSVVRSSLQNVQKAMKGLVVLSSELEDVVNSIMVGKIPRMWASKSYPSLKPLGSYVNDLFERLKFFRDWIDKGVPDVFWISGFYFTQSFLTGALQNYARKYKIPIDGLIFEFEVLPEDPVHAPDDGVYVRGLFLEGARWDRNTMQLTESTPKILYDALPIMWLVPKEKSKVEAKPCYVCPVYKTSARRGTLSTTGHSTNYVLSITLPTDLNESHWVRRGVAALCQLDD* # PASA_UPDATE: g9737.t1, single gene model update, valid-1, status:[pasa:asmbl_2372,status:12],[pasa:asmbl_2373,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 57700 66263 . + . ID=g9737;Name=g9737.t1 NODE_16_length_66263_cov_43.7954 . mRNA 57700 66263 . + . ID=g9737.t1;Parent=g9737;Name=g9737.t1 NODE_16_length_66263_cov_43.7954 . exon 57700 57754 . + . ID=g9737.t1.exon1;Parent=g9737.t1 NODE_16_length_66263_cov_43.7954 . CDS 57700 57754 . + 0 ID=cds.g9737.t1;Parent=g9737.t1 NODE_16_length_66263_cov_43.7954 . exon 58036 66263 . + . ID=g9737.t1.exon2;Parent=g9737.t1 NODE_16_length_66263_cov_43.7954 . CDS 58036 66263 . + 2 ID=cds.g9737.t1;Parent=g9737.t1;3_prime_partial=true #PROT g9737.t1 g9737 MARGSRTTLALCLVLLVSAAAADQVRREFVFDPSETPDVSDLFSTATPTATSSPTFSPGVNHAPVADPKTIELDSIDEDIEDDVNVGTTVFSIFSQLIEDEDVETYTGFPASIVYAMCAQFFEFYSFDFSSDWVSEIDEFEVFPQLVSAAFDDDLYSEVLGYSEDDFVIFDAVRYGFHFLPNLRVVTTPSTAHGVWQVKDGDKSFVPVQIKVDYPGWIYLRFKPNANYNGVQTISFAARDIVAYAKSKDAQSATITASLTINPVNDPPVRVSGKENVDMPANPFNITLDPLASAKIKDLIGASYTDIDSTTFGAVVTRVTVSGSNGYWQYLFNSTWVTISTSVTSRAALALGPDTKIRFVPLVTFYETSSITVRAWDLASGIEREFLNSDASVNNAFSVLRVTITSARYGCDSVLDSRKIKDACGTCGGNGSTCAGCDSVAGSNKKNDACGVCGGSNACFGCDNVPNSGKKNDDCGECDGKNSAKDCNGDCRGTAVLNACNICVGGRTGKAATAGMDCHGDCGGSAKLDVCQKCTGGNTGLVAGYSLDCNKKCGGSAAKDECGVCTDIKDKSKKWWIDCDSKCFGNATLDQCNVCSGGSTGVVANKDVDACGKCFSNNGTCLGCDNVPNSGKVRDNCDECDGDNSKCSKVISVTPSYVGDAFTGTMEVIGGGFNSVGAPLCRFTAKIGGGVTTSTGSYVSGGKVLCTLPASTAIGVYELSIYSLTNAYSVGSVDVTVYPSGLAKVSAVQPERVYIGTTSTIVVLGSDFFQASSLVCVFAYNVEEAPATIGAADQVVPATFINSTAVSCKVPTVSKSLKAFVTVSPNGVALFNVETGKKPQVIIARRQPFVETARFSSTGVDITVTFDKSVTEVTSCAAAFTTETVAKFGKNPKCSSPRLTQILINLGIGATVDIGTLLTFKTDALFVRDEDYSDAASGSTPVLIAINPTAPTVSLASVELLGSCDDLTVRYAVQGSVGSLPVTWEWTVSADNAEDTSTIKTLLGTGSNGIVVVGNGNFSFNVQYRISARAINFMGAKSDSVSISVGKVDAPLPQLSILGGDTRKIAVSDFLTINARTRLPSCVDVAKANITYLWTVDLNDVILYNDDTETVSVERFGLVGGNKYVFTVRAEVKGLGSGLVFSTASQTIVVLESTLSLVTSGGSIQTTGTGSAFAIAATCTDDDTADKSCADPIFQWTCLLSTGGPCLNAKGEQILEVTGVDATASSLSIPAGNLQAGSVYVLTASVVSGTRRQTASATVTAVSGTPPIVKVVREPVRPNVGSKIRFRVSVTSSKTVTSAKWEAVTNTDGSGIVDLSNKDNICTNGKVLDKTTLCISENVLTEQVAYKFRYTATSEDGTGSATVSFVTNSGPRNGDIVAVTTTGPIDSSFELRATDWSDPEGDLPLLYKFAYNDANGVSVALTDMLPEAYATVRLPAGVHSVSVVVFDSRGSSIASDTVDITVTTENTAGMTESDFATYIASLLASGDSLLQISAQSEFLTAMMSTLEVLNARSIGCSADILATLVTIVGRLEDIIKNVQLSDPNVDRVVVILQRIMAVYGGCLEAAVLDRLKTALNSAMSASISGLQGSSGSIDKSTASNAVDAAFKLNSANGTTSGTFMLESVQQIGTAFSPKQGSDETSTIISSMDGDVNIAVDVQDVDDNASGGNVPFEGPSGCEKLAVPVDLLKQKLKPTCDSVTGNCKTSVAGITVSFKANPTKVNTGLSDKDSFLGFTDATLVDQSKKIVAINGTDVLEVTVCLPKKPTGTRVHCQYFDTSAKKWTTADLATSITESSATCGTKHLSLFTITDGNDTVLDPPVGSYLTFSPGLNNVVEGGAFAATVKGSLGASNQSQSCCTYLWQVALTGTEDWVNVSSSPMSSRFSQTPSYSTKSATSKMTLSEVFSTFLDYSFRVIVIDGLGLNTTLNMFALNINVGSLSILQGREADAGLTKRWTEYWSTPDVNYPAFQRHILRVASNTTALRKYFGLERLDATSYQFKLYSTTGADTYIVMNNAYVTATFAILPTPDLEEQFKTAFTSAIQTVLTAAIPSGVFHVTYHITWPDSGSSLPLMFAVRDLTTGLPVPSATVKTAIFSGFGGACGVFATDNFLATYCGATVTAHTHVTLLTAEDQYIMAAGISAPYTVGFDSGEALDDPAFQFDIESAASVSFSYTEALPFKNADRIYLKNSLGGYLQVGEILGSTVPTFVASASDATIFARTDDGLYYISAGQSGASWDSPRCPNDLNVADCKAAVNNPTYRRLETDLGGEFGVLNVQVQMLNYPLPDIVTISESSVEDRPFGASTSMKSRFELWAQRNGSDTWYDLTDSVDDSATRCASSSAVASQSCLVVFNVLRYSRVNLKMPGNAGWRKLRIVLAEMQPFTTQLHSDDRYYSIERINVRSNCICNGHSRSCNLVNGACFDIDAGTGLPSAVLNCQHSTIGVSCDTCRLNYYVNPANDIPTDKYNCADPYGFRTCDGPTLPDITVSEIEARAFSFGKSGIIAADATGMFRTFFSGGPCLKCTCYRHTAFDQGDLNSRACDKESGICNCLSEERHVGGNNCESCEAGYCRACNATTGAGNTTTVAACRELTCHQCECNKHSLTKTAGGLDLCNPDLCGCTCDPSHNVTGTSCESCKKGYHSSTGDAKNGTSCYGCECNGHKSTHDNECSKLGGDCEKAYDGTTQLCGDNTMGDHCQYCVPGYYRPFQDDGTTILLTDGCIACECNGHGDAKQWTGSGTSTAAICDPNGGVCNCKAADNVEGD # ORIGINAL: g9725.t1 original gene structure, not modified by PASA NODE_16_length_66263_cov_43.7954 AUGUSTUS gene 1416 2958 . - . ID=g9725;Name=g9725.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS mRNA 1416 2958 . - . ID=g9725.t1;Parent=g9725;Name=g9725.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 2415 2958 . - . ID=g9725.t1.exon1;Parent=g9725.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 2415 2958 . - 0 ID=cds.g9725.t1;Parent=g9725.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 1416 2317 . - . ID=g9725.t1.exon2;Parent=g9725.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 1416 2317 . - 2 ID=cds.g9725.t1;Parent=g9725.t1 #PROT g9725.t1 g9725 MKQDAAVPFPLLSACAVDDADLQLSSIVPPLGEWVAAMEDMRSFSPRDYGMMESVLGEFASFRASRLGRAAWVHGQHSPLNLSAFFSATDGPDSLRFVPFVERWQLPCGSRVAIWGDIHGSARSLARTLVHMRDVLGALRDDWTLAPGWHAAFLGDMVDRGRRSLEVIYTALRLHNANPGRVAIIRGNHEDPSLNAVYGLHEELDAKMPQIESRAARLYAVYRYMPAAYYLGPSCDEGTQCDHDYVQLSHGSWEMGYSPRDLLAGLHGDAEHVTEIRRLSALYKLQFDTGAGQHIHSAIREDVAADKRLTAELSNARSRDAARPMSFGLMWHDLIAHEGAWPALRLLPGRGLAYGRALFEWLVDAAASPERDVRLRGVVRGHQHNNAAGPMLDLLRAGRGIVDLYASGAWPSRQNLSVRLPRARWATTVLSAPESNFIFEHDSFAVITVGAMWDDWRLVHFSKRNADRDAAFVERTVHAGR* # PASA_UPDATE: g9730.t1, single gene model update, valid-1, status:[pasa:asmbl_2378,status:3], valid-1 # PASA_UPDATE: g9730.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2379,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 22304 26263 . - . ID=g9730;Name=g9730.t1 NODE_16_length_66263_cov_43.7954 . mRNA 22304 26263 . - . ID=g9730.t1;Parent=g9730;Name=g9730.t1 NODE_16_length_66263_cov_43.7954 . five_prime_UTR 25615 26263 . - . ID=g9730.t1.utr5p1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 25527 26263 . - . ID=g9730.t1.exon1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 25527 25614 . - 0 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 25275 25409 . - . ID=g9730.t1.exon2;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 25275 25409 . - 2 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 24365 25161 . - . ID=g9730.t1.exon3;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 24365 25161 . - 2 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 24097 24208 . - . ID=g9730.t1.exon4;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 24097 24208 . - 0 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 23809 23987 . - . ID=g9730.t1.exon5;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 23809 23987 . - 2 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 23480 23650 . - . ID=g9730.t1.exon6;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 23480 23650 . - 0 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 23236 23329 . - . ID=g9730.t1.exon7;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 23236 23329 . - 0 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 23039 23115 . - . ID=g9730.t1.exon8;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 23039 23115 . - 2 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . exon 22304 22920 . - . ID=g9730.t1.exon9;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . CDS 22336 22920 . - 0 ID=cds.g9730.t1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 22304 22335 . - . ID=g9730.t1.utr3p1;Parent=g9730.t1 NODE_16_length_66263_cov_43.7954 . mRNA 22304 26263 . - . ID=g9730.t1.1.5b6be70a;Parent=g9730;Name=g9730.t1 NODE_16_length_66263_cov_43.7954 . five_prime_UTR 26167 26263 . - . ID=g9730.t1.1.5b6be70a.utr5p1;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 25794 26263 . - . ID=g9730.t1.1.5b6be70a.exon1;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 25794 26166 . - 0 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 25527 25676 . - . ID=g9730.t1.1.5b6be70a.exon2;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 25527 25676 . - 2 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 25275 25409 . - . ID=g9730.t1.1.5b6be70a.exon3;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 25275 25409 . - 2 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 24365 25161 . - . ID=g9730.t1.1.5b6be70a.exon4;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 24365 25161 . - 2 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 24097 24208 . - . ID=g9730.t1.1.5b6be70a.exon5;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 24097 24208 . - 0 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 23809 23987 . - . ID=g9730.t1.1.5b6be70a.exon6;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 23809 23987 . - 2 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 23480 23650 . - . ID=g9730.t1.1.5b6be70a.exon7;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 23480 23650 . - 0 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 23236 23329 . - . ID=g9730.t1.1.5b6be70a.exon8;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 23236 23329 . - 0 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 23039 23115 . - . ID=g9730.t1.1.5b6be70a.exon9;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 23039 23115 . - 2 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . exon 22304 22920 . - . ID=g9730.t1.1.5b6be70a.exon10;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . CDS 22336 22920 . - 0 ID=cds.g9730.t1.1.5b6be70a;Parent=g9730.t1.1.5b6be70a NODE_16_length_66263_cov_43.7954 . three_prime_UTR 22304 22335 . - . ID=g9730.t1.1.5b6be70a.utr3p1;Parent=g9730.t1.1.5b6be70a #PROT g9730.t1 g9730 MAGNTQDAEVLRGQLQQLDNEDDDDEKLHVTFFVASTGDTIVDAFGERDSIFEVKGVLGRKLRYSSSMLELKLGDKAVHDEVRLGDLPILNGGIRLTVSYAGETPLAADDSSHPLAMAHAHAQHAAAERSPKQAAHGHGAAEGNAHAHEQADSSKPRAPYRAATPLSLEFVMEVTIKEDEKGGQRSSGAQTGESAPEASEPRIVHVHVKREGLRKAFIGGFLNRKSGKEYHHATTQTDKRKGNARVVEKFHRDTQTVDTRNRTQQAKRDHSTQMDKTGCFVHDINDKIIHPGKYMTADEWHALVLKATVTIQSFARGMFGRRRAKTVREMRQGQQMWQHEEEERKLREKEIAHQKAIARATHPRTRDDFDFLYHGLETWRERMVGAIKAEKLTDDERKARMEELLQQECTLIASIDRLKCEAIQETKDLRIKKFLDAIAAPKQWLNTDGKITEVDTPSTIRARALRDIFESVTQQSLTLDERLDVLLQVKYTVKEHDCKLTRELLSLIDREADLVIRGCRDASLVGLRKRITHLFLQFIETPEFNPEAGKKQVETLVHKSRRIHYCRNCNSYYSPDDFDINSTMRTMGKCLSCIMHENDAVQRTDLAFFRTLLSTVRQEEEEKGGNPRIVHLLQPTDIRYIVETVWNGQSSLSGVKQLDELTLCRWDTSRELSPWNCVLLTKDEAAVHALLPGGLYESYADEFRAYVAKRHLLAKNHFLRIEGLAKKMAPIPPSSTRSSRLSLVT* #PROT g9730.t1.1.5b6be70a g9730 MVDGEENEGVSYDDNAVDAAEHDENAENEETHAEDADLNGDEGVVQESEDVEISGAVAVETREETPEDTVGMDEGDAGAAGDGDAAAEEKEAEPALGELEDGPEGDGAARDQQSSAMAGRDEDEDAASRGESPDVVQPGSSVRIPMAGNTQDAEVLRGQLQQLDNEDDDDEKLHVTFFVASTGDTIVDAFGERDSIFEVKGVLGRKLRYSSSMLELKLGDKAVHDEVRLGDLPILNGGIRLTVSYAGETPLAADDSSHPLAMAHAHAQHAAAERSPKQAAHGHGAAEGNAHAHEQADSSKPRAPYRAATPLSLEFVMEVTIKEDEKGGQRSSGAQTGESAPEASEPRIVHVHVKREGLRKAFIGGFLNRKSGKEYHHATTQTDKRKGNARVVEKFHRDTQTVDTRNRTQQAKRDHSTQMDKTGCFVHDINDKIIHPGKYMTADEWHALVLKATVTIQSFARGMFGRRRAKTVREMRQGQQMWQHEEEERKLREKEIAHQKAIARATHPRTRDDFDFLYHGLETWRERMVGAIKAEKLTDDERKARMEELLQQECTLIASIDRLKCEAIQETKDLRIKKFLDAIAAPKQWLNTDGKITEVDTPSTIRARALRDIFESVTQQSLTLDERLDVLLQVKYTVKEHDCKLTRELLSLIDREADLVIRGCRDASLVGLRKRITHLFLQFIETPEFNPEAGKKQVETLVHKSRRIHYCRNCNSYYSPDDFDINSTMRTMGKCLSCIMHENDAVQRTDLAFFRTLLSTVRQEEEEKGGNPRIVHLLQPTDIRYIVETVWNGQSSLSGVKQLDELTLCRWDTSRELSPWNCVLLTKDEAAVHALLPGGLYESYADEFRAYVAKRHLLAKNHFLRIEGLAKKMAPIPPSSTRSSRLSLVT* # PASA_UPDATE: g9732.t1, single gene model update, valid-1, status:[pasa:asmbl_2369,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 38283 39820 . + . ID=g9732;Name=g9732.t1 NODE_16_length_66263_cov_43.7954 . mRNA 38283 39820 . + . ID=g9732.t1;Parent=g9732;Name=g9732.t1 NODE_16_length_66263_cov_43.7954 . exon 38283 39820 . + . ID=g9732.t1.exon1;Parent=g9732.t1 NODE_16_length_66263_cov_43.7954 . CDS 38283 39746 . + 0 ID=cds.g9732.t1;Parent=g9732.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 39747 39820 . + . ID=g9732.t1.utr3p1;Parent=g9732.t1 #PROT g9732.t1 g9732 MTNEPPKGLRANLLRSYLNDPISDQAFFGGCPGKEAAWEKMLFGLCFFHAIVQERRQFGPLGWNIPYEFNESDLRISVRQLQMFINEYDVVPFPALVYMTGQCNYGGRVTDDWDRRCLSDILSIYYCPELIDDAKYKFSPSGTYFAPPKGTHATYVEYIQNLPTTQHPEAFGMNENVDISRELQEARMLLNSILQTQARAAGAAGKTTDETLLEILNDILARLPPDFDIEVASRQFPQAYNESMNTVLVQEMVRFNNLLRTVRDSLQELKKALKGLVVMSSDLENVAKSLLVGALPALWAKRSYPSLKPLGSYISDFLARLRFLQDWNDSGVPKVFWISGFFFTQSFLTGALQNYARKYTIAIDTLGFEFEVLNADDCDEPPLDGVYVRGLFIEGARWNRDAGVIGESLPKVLFDAMPVIWLRPGITAEFKQKPVYDCPVYKTSARRGTLSTTGHSTNYVLTIKLPSDRPTRHWTCRGVALLCQLDE* # PASA_UPDATE: g9734.t1, single gene model update, valid-1, status:[pasa:asmbl_2380,status:12], valid-1 NODE_16_length_66263_cov_43.7954 . gene 45016 50040 . - . ID=g9734;Name=g9734.t1 NODE_16_length_66263_cov_43.7954 . mRNA 45016 50040 . - . ID=g9734.t1;Parent=g9734;Name=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 49746 50040 . - . ID=g9734.t1.exon1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 49746 50040 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 49381 49485 . - . ID=g9734.t1.exon2;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 49381 49485 . - 2 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 48876 49148 . - . ID=g9734.t1.exon3;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 48876 49148 . - 2 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 48156 48715 . - . ID=g9734.t1.exon4;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 48156 48715 . - 2 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 47825 47954 . - . ID=g9734.t1.exon5;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 47825 47954 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 47244 47711 . - . ID=g9734.t1.exon6;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 47244 47711 . - 2 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 47058 47088 . - . ID=g9734.t1.exon7;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 47058 47088 . - 2 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 46855 46936 . - . ID=g9734.t1.exon8;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 46855 46936 . - 1 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 46628 46711 . - . ID=g9734.t1.exon9;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 46628 46711 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 46240 46461 . - . ID=g9734.t1.exon10;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 46240 46461 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 46004 46084 . - . ID=g9734.t1.exon11;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 46004 46084 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 45627 45796 . - . ID=g9734.t1.exon12;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 45627 45796 . - 0 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . exon 45016 45344 . - . ID=g9734.t1.exon13;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . CDS 45149 45344 . - 1 ID=cds.g9734.t1;Parent=g9734.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 45016 45148 . - . ID=g9734.t1.utr3p1;Parent=g9734.t1 #PROT g9734.t1 g9734 MSDKMQVDRVESAYDEQAVEDDGDNGSDSSDASESDASDGADGVDAEARIGELRTHLAHNATAYDLHIEYISLLRKAGRLDVLRHAREKMSAVFPLTEELWLQWIKDEILNARGAEGYAAIVNLAERAIKDYLSISTWLLYAEFLCTAMEDRMSDAATAAGVRAVFERAIAAGGLHVTEGVRLWSAYRAFDEAELHRAADESDKAKLVSSLDALYRRQLSVPLINMEETMASYETWRRAMGLPDVTPEFTKRVTATVAKVDERLPFEEAVSVASPPPLEAFLAYIAFEKEKGDPSRVQIVFERAVKDHPLDLSLWLAYVTYMESTVKSAPAVTGLCERAVRNCPWASIFWIALLRCKEKMGSPREEVDDAFERALGTPFAAGQEYLDLWLAVLDFHRRQIDWALPAEQRAERGTTLRRMFSRAVGHLEQHFGTAVDPFARVQRYWARTEARLFKDASAARKVWDALLKDPLRVHTSWLWAEYAQLEMECMGSVDGARKVFKQALTHLLTDAGIVYEAFLDLERLHGNLDTFDDARRRIEGNAARDTQHREAEERHQQQTEAEKPKRDQRAAKPTQRGSKPDDGRSGAQDGRPDRKRGADDAEDKPAKRRKGEEEEPEAKERRDAHTIFVSNLDKQVDEVALQSHFTEKVGVVVEVRLVKNLAGFSKCFAYVEFAIEGSVDKAISMDRQPLLGRPMLISRAMDKDKRAQKGAAAGAPKGLKFSEGADPRTLFVANLPFAATSEDLKRLFEKFGAIKEVRVVEKAGKPKGYAYVEFVDAEAAASAVAMDKQVFMERPLSVAISNPGARPPNPNPHLAPNQPIITRDGERPKARIGGVDLARLVPRAVRTGPALAARPKVAAPKSEEAREVATGDLVASDTPAEAAPAPLSNSDFRKFLRK* # ORIGINAL: g9726.t1 original gene structure, not modified by PASA NODE_16_length_66263_cov_43.7954 AUGUSTUS gene 3504 4607 . - . ID=g9726;Name=g9726.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS mRNA 3504 4607 . - . ID=g9726.t1;Parent=g9726;Name=g9726.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 3757 4607 . - . ID=g9726.t1.exon1;Parent=g9726.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 3757 4607 . - 0 ID=cds.g9726.t1;Parent=g9726.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 3504 3630 . - . ID=g9726.t1.exon2;Parent=g9726.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 3504 3630 . - 1 ID=cds.g9726.t1;Parent=g9726.t1 #PROT g9726.t1 g9726 MAEASSIARTAHVVAAALVSRRAAELPAPVEGANNDGSRNLKTLVDNAVENVETAGEVHNEGDAAKLGEAVASVQTLARSVSARRKKRRAQSWPERRKRRVERASAARSRQLAESIACDAAADAWRARRLAAEAALIREETLQNDAGETLAEIHAKIEDLAVWSDILDTLERLRALRQERARKQADFVDECAEDFGSALRHMRAVLRTQADVYAGECRVVEAMLASTADDPPFVSTVPASAPSVTPAARSLYRDTLCLSPNLSEGMAAYYAQAYDSVLGLIAVRRAWDAQLTAPGRGSNVPARLVPPPAPSSAEWAVYAVAEPIT* # ORIGINAL: g9724.t1 original gene structure, not modified by PASA NODE_16_length_66263_cov_43.7954 AUGUSTUS gene 236 1318 . + . ID=g9724;Name=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS mRNA 236 1318 . + . ID=g9724.t1;Parent=g9724;Name=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 236 345 . + . ID=g9724.t1.exon1;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 236 345 . + 1 ID=cds.g9724.t1;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 435 503 . + . ID=g9724.t1.exon2;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 435 503 . + 2 ID=cds.g9724.t1;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 583 802 . + . ID=g9724.t1.exon3;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 583 802 . + 2 ID=cds.g9724.t1;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 892 1081 . + . ID=g9724.t1.exon4;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 892 1081 . + 1 ID=cds.g9724.t1;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 1208 1318 . + . ID=g9724.t1.exon5;Parent=g9724.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 1208 1318 . + 0 ID=cds.g9724.t1;Parent=g9724.t1 #PROT g9724.t1 g9724 YRRQALRWHPDKNPGNRDEAEVKFKLISEAYEALSDPAKRRIFDLYGETGLKEGAPAGQGAAFDDRFDGFHGFHAHDPSELFRQFFSGADPFASFFGGREAFGGNEFFSPGIDDPFFSSTPGRISRFFDPIGSSIGDRRGTWPYHRPSRTRSPGGQFGTAGGEARISGTGGINMTRTSTSSYTVNGKRTVKRTVVKNGVTTVEVEEDGVLVSRTVDGVPDGIQQQQTSRIKA* # ORIGINAL: g9733.t1 original gene structure, not modified by PASA NODE_16_length_66263_cov_43.7954 AUGUSTUS gene 40284 44851 . + . ID=g9733;Name=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS mRNA 40284 44851 . + . ID=g9733.t1;Parent=g9733;Name=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 40284 41677 . + . ID=g9733.t1.exon1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 40284 41677 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 41838 41949 . + . ID=g9733.t1.exon2;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 41838 41949 . + 1 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 42186 42290 . + . ID=g9733.t1.exon3;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 42186 42290 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 42560 42652 . + . ID=g9733.t1.exon4;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 42560 42652 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 42834 43094 . + . ID=g9733.t1.exon5;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 42834 43094 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 43228 43362 . + . ID=g9733.t1.exon6;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 43228 43362 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 43482 43614 . + . ID=g9733.t1.exon7;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 43482 43614 . + 0 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 43839 43995 . + . ID=g9733.t1.exon8;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 43839 43995 . + 2 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 44226 44303 . + . ID=g9733.t1.exon9;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 44226 44303 . + 1 ID=cds.g9733.t1;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS exon 44428 44851 . + . ID=g9733.t1.exon10;Parent=g9733.t1 NODE_16_length_66263_cov_43.7954 AUGUSTUS CDS 44428 44851 . + 1 ID=cds.g9733.t1;Parent=g9733.t1 #PROT g9733.t1 g9733 MATAARVCAGICVCLSALAVVGCLPLASAASAAAFRPLFPESLTWFVEVVDSVSITTLSPLFPHTQHTLHVRVANDGVPDVARTRELALSGGSPSVDVDELESVVDGSFVLVTETDEANAVTGWFFHFKTAKNGELYFTVSGSRIASWYPVADTWVILFVNPFVRRTGPGAYVNLIGSAAASSEIYGATEANVWENAGLSTAIFVVLNSSSNVVYYTDSEFARPPTAIKLANSVLSSPAACAAPYTAFNNGIRAVLATNDRVVVLGPSGIVEGRGTDVAGQDLVWSNSLRACVSSVAVSRQVVVSDRYMVVFAFDAVSPYVVYRAEVRSDNAQPAPFTPLVDRLGRGMGAALSLSALSNSSIVSASESIAGAGVVTFLVDTGAPTGSRYSIVQYAQSTWTLATRLPRTACLRSARFGEDIVRMFEGVEGSPRGSCTTFELVLNNIEFSRTISTDVFLFGNALLYSPDAGLSFYIIREFKDSPIISFASAFDSSYACVTASGEVWFGQADFSELALLQPAQQSGRLFSIFFSYDDSLRFLSISKTNASDLIAQTLDIQSAVDQSALADNAMCPYKELVFDAEKNATFTRRQDSEWQDLPDHIFVDKAWDYGIVLSLTPRDGVSLDDLTATIVAEQTYISVSYERSVSVSSNSVNYTFHITDKAIAREQSFPGENVIPTGVRIFVNGATFACQDSSKKSDIKTAVSSNLVVYSGCPKQQSISFVKGGTVNDHCTPIDGIPCVYFDNEFQPSFVLTDDLTENTSPFTGRYRLRLIGGGETLSSVAEFSEADFYKYNPITERGVGSQPIWSPNANEAAVNDTVTSLTFVCPLGSVCSRVYPRNGNVPEFFFLWEVDTSPTNGDASYCRFKYRFIVRVFGLPMDIITTAYITIGTFGLGIVLVLLGFFFVPLEGADGGFSSESLVGSKGSLLSRLRRRGKVDPAAVTATSSSPIGNMEFMAAWESGGR* # PASA_UPDATE: g9727.t1, single gene model update, valid-1, status:[pasa:asmbl_2374,status:3], valid-1 NODE_16_length_66263_cov_43.7954 . gene 4999 7841 . + . ID=g9727;Name=g9727.t1 NODE_16_length_66263_cov_43.7954 . mRNA 4999 7841 . + . ID=g9727.t1;Parent=g9727;Name=g9727.t1 NODE_16_length_66263_cov_43.7954 . five_prime_UTR 4999 5052 . + . ID=g9727.t1.utr5p1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 4999 5111 . + . ID=g9727.t1.exon1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 5053 5111 . + 0 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 5268 5352 . + . ID=g9727.t1.exon2;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 5268 5352 . + 1 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 5465 5603 . + . ID=g9727.t1.exon3;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 5465 5603 . + 0 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 5701 6477 . + . ID=g9727.t1.exon4;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 5701 6477 . + 2 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 6616 6764 . + . ID=g9727.t1.exon5;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 6616 6764 . + 2 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 6988 7113 . + . ID=g9727.t1.exon6;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 6988 7113 . + 0 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . exon 7261 7841 . + . ID=g9727.t1.exon7;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . CDS 7261 7476 . + 0 ID=cds.g9727.t1;Parent=g9727.t1 NODE_16_length_66263_cov_43.7954 . three_prime_UTR 7477 7841 . + . ID=g9727.t1.utr3p1;Parent=g9727.t1 #PROT g9727.t1 g9727 MFADSDAETVGFPSSWERVRRTETVAAQTKESSQKERATQTHSVTTSESQTEPERKTGLSLADADTAVLGAFLRRVEGVVCEQLKLNVQSHAFDGYDVQWEEAATSVSCTHVLRNGALDESATMPITGVAWNCAGSVVAAASGRVDHQDWCTHRSHVCTWSIDRRGIDRNRPDMSLDVPGCAMALAFHPEFPSWLACGTFNGDVIVWDLSRDDDPVLCSSARDDDRSHREAVTGLAWLEDGTGSAVGGGGVGAFTSVVSWKLLTTGADGRAVLWHVPSRAGSRLEPLRQFALRAEGVARDGTYGGRRARENAELGATCVGIASREDKSNFIVGTENGGVFKCSLNPRGRVAIQGLDSDAVSPIVFAFAPHAGPAYGADCSPFHRNLFITCSTDGSVHLYSQLQSKPILTMDVGLGAVFAVGWSPARPLVFAGVTSEGRLFVYDLKANRNTPTAVFDAAPPKHAAQALAFNARRPQLLATGDSAGNLRVWRLSDEFVLIQGGETARFRELARTGIDA* # PASA_UPDATE: g4394.t1, single gene model update, valid-1, status:[pasa:asmbl_7502,status:12], valid-1 NODE_4652_length_1369_cov_25.8818 . gene 262 1142 . + . ID=g4394;Name=g4394.t1 NODE_4652_length_1369_cov_25.8818 . mRNA 262 1142 . + . ID=g4394.t1;Parent=g4394;Name=g4394.t1 NODE_4652_length_1369_cov_25.8818 . five_prime_UTR 262 263 . + . ID=g4394.t1.utr5p1;Parent=g4394.t1 NODE_4652_length_1369_cov_25.8818 . exon 262 677 . + . ID=g4394.t1.exon1;Parent=g4394.t1 NODE_4652_length_1369_cov_25.8818 . CDS 264 677 . + 0 ID=cds.g4394.t1;Parent=g4394.t1;5_prime_partial=true NODE_4652_length_1369_cov_25.8818 . exon 924 1142 . + . ID=g4394.t1.exon2;Parent=g4394.t1 NODE_4652_length_1369_cov_25.8818 . CDS 924 1142 . + 0 ID=cds.g4394.t1;Parent=g4394.t1 #PROT g4394.t1 g4394 EITLEFRSDANGKLPRDSLAEIRFLVRPSDAGNDDSEDKEDDSAARAKELYQQILPSAGPQQATGTSIVTFENILCEVPRGRFEIEFFPEFFLLRGKQSQFRVKYDHVERLFALPRPDQTHVYFIVTVTPPLKQGNTSYPHVVLKFDKADEEKMELNIPDDFHGELSLDDKLEGPSFEVFGRVIKAMVDVARAAKKRKSIKVVVPSGFKR* # PASA_UPDATE: g6689.t1, single gene model update, valid-1, status:[pasa:asmbl_3523,status:12], valid-1 NODE_2102_length_7739_cov_40.5645 . gene 931 2833 . - . ID=g6689;Name=g6689.t1 NODE_2102_length_7739_cov_40.5645 . mRNA 931 2833 . - . ID=g6689.t1;Parent=g6689;Name=g6689.t1 NODE_2102_length_7739_cov_40.5645 . exon 931 2833 . - . ID=g6689.t1.exon1;Parent=g6689.t1 NODE_2102_length_7739_cov_40.5645 . CDS 1010 2833 . - 0 ID=cds.g6689.t1;Parent=g6689.t1 NODE_2102_length_7739_cov_40.5645 . three_prime_UTR 931 1009 . - . ID=g6689.t1.utr3p1;Parent=g6689.t1 #PROT g6689.t1 g6689 MGTRPSPTLEVLCRVCGVAVSPSETAIAIHKAGKRHLARLAEAIARVDKARRSVFVRKFGDDLARDELSALFAGYGELRCVAVTADAASPDNRFAIVEFDSAEAVTKCLTAAQSANGVRINGTKLCVKARNIEEIVEPSAPLLHSPDHAPQSAANRNAGESSEDAKCDLPHKHRRKRRKRVTITEEQIDADIANVRNCIALMGENNLEDGRLKTAVEACTLARSMSDASRADREKAAVDTQSCLRAAGGALASATVSLFGSSVTGFGSDSSDVDLTVLTDCASHSADTKNPESDHGSIASLPPSQVIQLVATALRAHGSPLLEGVSCISTARTPIVKYVHAFTRLRVDLSANNRLAIANSALLREYRALDPRVHAVVSVLRAWADDANIAAKTRVSHYALTLLAIHRMQSTHPPTLPHLQNIGHAVPMTTNKELSASRGSSENGYCGDGPCCGDQGGNCQCMHARNNSSVDGWDCSFLRPSHCSALAHQLCARVDRSKETSSILLDFFRHFGCDMDWRRVGIRLSVPGYCAMDLQGGEAPTSTGVGDPPCILIEDPFEKSHNLGANTSLHAAQLFASECRRAAVSLVEAHTKQHILPQWIAQHPPKR* # PASA_UPDATE: g6690.t1, single gene model update, valid-1, status:[pasa:asmbl_3521,status:12],[pasa:asmbl_3524,status:12], valid-1 NODE_2102_length_7739_cov_40.5645 . gene 3544 7692 . - . ID=g6690;Name=g6690.t1 NODE_2102_length_7739_cov_40.5645 . mRNA 3544 7692 . - . ID=g6690.t1;Parent=g6690;Name=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 7666 7692 . - . ID=g6690.t1.exon1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 7666 7692 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 7461 7535 . - . ID=g6690.t1.exon2;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 7461 7535 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 6924 7043 . - . ID=g6690.t1.exon3;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 6924 7043 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 6350 6504 . - . ID=g6690.t1.exon4;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 6350 6504 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 6050 6114 . - . ID=g6690.t1.exon5;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 6050 6114 . - 1 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 5766 5847 . - . ID=g6690.t1.exon6;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 5766 5847 . - 2 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 5566 5659 . - . ID=g6690.t1.exon7;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 5566 5659 . - 1 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 5179 5259 . - . ID=g6690.t1.exon8;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 5179 5259 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 4852 4953 . - . ID=g6690.t1.exon9;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 4852 4953 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 4408 4569 . - . ID=g6690.t1.exon10;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 4408 4569 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 4116 4284 . - . ID=g6690.t1.exon11;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 4116 4284 . - 0 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . exon 3544 3904 . - . ID=g6690.t1.exon12;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . CDS 3837 3904 . - 2 ID=cds.g6690.t1;Parent=g6690.t1 NODE_2102_length_7739_cov_40.5645 . three_prime_UTR 3544 3836 . - . ID=g6690.t1.utr3p1;Parent=g6690.t1 #PROT g6690.t1 g6690 MSALFGNGPGMGSWYLSWALDTNIEEREKGKTVEVGRAHFETPSKRFTILDAPGHKGFVPNMIGGAAQADVGVLVISARKGEFETGFERGGQTREHAMLAKTAGVKHLVVVINKMDDPTVNWDKERYDECVSKLKPYLQSCGYNVKSEVFFMPVSGLTGANLREPLAAGIFPHYNGPSLLAFLEQMKPIERMNLAPLRMPIVDKFKDMGTIVFGKIESGRVVRGQQLVLMPNGANVEVMNIYVDEREISVANSGDNVKLKLKGVEEEDVSPGFVVCEPLNRVHSVRTFDAQIAILDYKSIICAGFGAILHIHTCVEEVKLLDLIALVDKKTGKRSKTPPRFVKQGQVVIARLQTAGFVCLETFKDFPQLGRFTLRDEGKSIAIGKVLRLVHDDAPAAEN* # PASA_UPDATE: g6688.t1, single gene model update, valid-1, status:[pasa:asmbl_3522,status:12], valid-1 NODE_2102_length_7739_cov_40.5645 . gene 340 678 . + . ID=g6688;Name=g6688.t1 NODE_2102_length_7739_cov_40.5645 . mRNA 340 678 . + . ID=g6688.t1;Parent=g6688;Name=g6688.t1 NODE_2102_length_7739_cov_40.5645 . five_prime_UTR 340 340 . + . ID=g6688.t1.utr5p1;Parent=g6688.t1 NODE_2102_length_7739_cov_40.5645 . exon 340 678 . + . ID=g6688.t1.exon1;Parent=g6688.t1 NODE_2102_length_7739_cov_40.5645 . CDS 341 553 . + 0 ID=cds.g6688.t1;Parent=g6688.t1;5_prime_partial=true NODE_2102_length_7739_cov_40.5645 . three_prime_UTR 554 678 . + . ID=g6688.t1.utr3p1;Parent=g6688.t1 #PROT g6688.t1 g6688 LSIVCFLKSTIVILAGVVLILTGLAYLLKTFAPTKDDEDPRKSVIGSQYGTNESAPGTPGPDPEAVRRAV* # ORIGINAL: g12768.t1 original gene structure, not modified by PASA NODE_2778_length_5148_cov_42.4203 AUGUSTUS gene 1566 4685 . + . ID=g12768;Name=g12768.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS mRNA 1566 4685 . + . ID=g12768.t1;Parent=g12768;Name=g12768.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS exon 1566 3285 . + . ID=g12768.t1.exon1;Parent=g12768.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS CDS 1566 3285 . + 0 ID=cds.g12768.t1;Parent=g12768.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS exon 3955 4685 . + . ID=g12768.t1.exon2;Parent=g12768.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS CDS 3955 4685 . + 2 ID=cds.g12768.t1;Parent=g12768.t1 #PROT g12768.t1 g12768 MAESVVMWLDAVGLSSHASTLCDNGYDDLAVCEELTDGDLTDIGIDDGVVRGRIIAAAAQLKSEGLDALLAKASAASAASAAVKAPPPVAPKTVVAPAPAVPAIPAEATTTSAAAPDAAFGDVGRWLHSEGLGMHAAVLCENGYDDLSVCAEVSEGDLEDIGIDEGAVKSAILDAITKLKARGVDETVASLAAESKKAASIVAHAAPATAPPTVTKPTVGSKPPVVAKPPVATKTAASGTPSTEKPVTATDRPVTATVTAIDKPVTATVTATDKPVPATNKPPTDKPVPAVATKPAVAPKAVTTAPVTQSSAAAPPQSTSPDAASAVSALPHSTSAPHAPSIAAKPAELTGGSTPIASKPPPAVASKPSVAPKSATASSSPATDTPPKPAPGLAPKPAVAAKAPSTPATSAAPPTSAPVVSTTGTPGPTEGGEVPKKPPVFGKQGPGLPSDVVSQMKASLTAPRTPGQSTLTASNAGDDDNVPRRRSSASDAMSARETALKSVAASRQAAAAAVALGAVLGGPPPIGAKRRQSDGSGAADVKALQMGIAAGLPFGKPKEKEEDGDAVAQQPAE*SASNDAASTPTLSDDAPAAPAAQVTEVAADVTKAVTASEAPVTPSASEPTPQPEKAAEATAPVKSTPTPTPTAALSPATTTPTPTPGTSAETRRVSAAPSVSGTFQRKPSEGKLATPGPAAAVAREPLRVDTRASVIYEGPPSPHTASAAPLRLQRNNSDNDMNSGGEEEQRKFSITSKFASVMRLGRSDSVDDDDKKSRRTSILGSIKSGMDKVVSKAQAMASPESKRMSIRRAESEAAVR* # ORIGINAL: g12767.t1 original gene structure, not modified by PASA NODE_2778_length_5148_cov_42.4203 AUGUSTUS gene 690 1000 . - . ID=g12767;Name=g12767.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS mRNA 690 1000 . - . ID=g12767.t1;Parent=g12767;Name=g12767.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS exon 690 1000 . - . ID=g12767.t1.exon1;Parent=g12767.t1 NODE_2778_length_5148_cov_42.4203 AUGUSTUS CDS 690 1000 . - 0 ID=cds.g12767.t1;Parent=g12767.t1 #PROT g12767.t1 g12767 MDAVSDVSTGDPITSTDTAAAADADKHNNDAEVHQLGEWDASHDDPLTERSNETQDVDSKATSRDQDAEEADVSCVESAGGELGFDNRSFTPQQRNRLVRMAA # PASA_UPDATE: g182.t1, single gene model update, valid-1, status:[pasa:asmbl_4188,status:12], valid-1 NODE_2384_length_6473_cov_80.4273 . gene 3483 6281 . + . ID=g182;Name=g182.t1 NODE_2384_length_6473_cov_80.4273 . mRNA 3483 6281 . + . ID=g182.t1;Parent=g182;Name=g182.t1 NODE_2384_length_6473_cov_80.4273 . exon 3483 6281 . + . ID=g182.t1.exon1;Parent=g182.t1 NODE_2384_length_6473_cov_80.4273 . CDS 3483 6242 . + 0 ID=cds.g182.t1;Parent=g182.t1 NODE_2384_length_6473_cov_80.4273 . three_prime_UTR 6243 6281 . + . ID=g182.t1.utr3p1;Parent=g182.t1 #PROT g182.t1 g182 MCARAKTVLHATRTCTAGWTGTNCDQPCAADKWGLNCINTCTCKNGAACNAQTGACTCTAGWTGTQCDQVCAATLYGPNCAYGCNCQNGAACNRFTGACSCSVGFNGTTCGQPCPATAWGVNCINTCTCKNGAACNAQTGACSCTVGWTGANCDQPCATDKWGVDCTNTCTCKNGASCNVFTGTCTCAAGWTGANCDKPCSSTTYGLNCAGVCACLNNAACDRFTGTCGCTAGWTNTYCDQPCPNGKFGANCAMPCDCANGAACDRFTGGCTCTKGWTGVKCNDTCPLNRFGANCTGTCDCHNGATCDRFIGCACAAGWMGTFCDQPCSTATYGPSCTSSCDCRNDAVCDRFTGACNCSAGWTGAHCERTCPSRTYGPDCISDCACRNGASCDRYTGLCECTSGWMNVTCETPCPDGSYGSGCTLSCACKNGAACDRSSGTCTCSKGWKGLECATACTNGTYGAYCVSTCDCQNSGACDRFTGNCNCTAGWQGLTCELSTASQGTSAVSSSGSMSGAIAGAVASVAVIAVLVLIALWYRRRRDRQKQAAMARTEMEFIDTVVRRPEIVALELLAAHIKFRERLGEGEFGEVFCADVTLDSVAVVAAVKTFKVPPTASAEDVRSARSAFMAEIDLMRSVPAHDNVIRLLGVCTTSDPNCVVLEFAEHGDLRHYVMVAKQSFSVADFGCFCVDVARGMAHLAEVGIVHRDLAARNCMVVAGRPPCVEEAAWNLSARGSVTVKIADFGLSRDASTSNDYYKSRSKGKVPIKWMAPESLNHRVYTHASDVWSYGITMWEVYSRSCKPYPGLENYAVADYLRADKRMSIPDGCPPKVYAIMESCWRKLPETRPTFGQLVVRIRRVLGGSKEGDLRLGARVDDDDDDSDFTDGKMPNTYVEMVPERDTRQYMHMISNPVYHVVES* # PASA_UPDATE: g181.t1, single gene model update, valid-1, status:[pasa:asmbl_4187,status:12], valid-1 NODE_2384_length_6473_cov_80.4273 . gene 67 706 . + . ID=g181;Name=g181.t1 NODE_2384_length_6473_cov_80.4273 . mRNA 67 706 . + . ID=g181.t1;Parent=g181;Name=g181.t1 NODE_2384_length_6473_cov_80.4273 . exon 67 706 . + . ID=g181.t1.exon1;Parent=g181.t1 NODE_2384_length_6473_cov_80.4273 . CDS 67 690 . + 0 ID=cds.g181.t1;Parent=g181.t1;5_prime_partial=true NODE_2384_length_6473_cov_80.4273 . three_prime_UTR 691 706 . + . ID=g181.t1.utr3p1;Parent=g181.t1 #PROT g181.t1 g181 AIVDAEYVSPLSRGMKPTQKRKLDALRQLRMDLVRTQTASANTAAAALPCSAVAPNPFPCAAVAPNALPCAAVAPNALPCAAVAPNPLPCAAVAPNPLPCTAVAPNTNPHPVTAKRKGMDDGDESVTLSATAVGNVTGHVTREVAVECAAGKGAKKENAPKTSTTHAHWQQSALASWIQVPKASVTKTQQSSSASSWVQPAKLLRRE* # ORIGINAL: g14420.t1 original gene structure, not modified by PASA NODE_3814_length_2695_cov_32.4256 AUGUSTUS gene 89 2628 . + . ID=g14420;Name=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS mRNA 89 2628 . + . ID=g14420.t1;Parent=g14420;Name=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 89 237 . + . ID=g14420.t1.exon1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 89 237 . + 0 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 556 668 . + . ID=g14420.t1.exon2;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 556 668 . + 1 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 832 910 . + . ID=g14420.t1.exon3;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 832 910 . + 2 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 1300 1347 . + . ID=g14420.t1.exon4;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 1300 1347 . + 1 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 1458 1578 . + . ID=g14420.t1.exon5;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 1458 1578 . + 1 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 1780 1967 . + . ID=g14420.t1.exon6;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 1780 1967 . + 0 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 2282 2428 . + . ID=g14420.t1.exon7;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 2282 2428 . + 1 ID=cds.g14420.t1;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS exon 2607 2628 . + . ID=g14420.t1.exon8;Parent=g14420.t1 NODE_3814_length_2695_cov_32.4256 AUGUSTUS CDS 2607 2628 . + 1 ID=cds.g14420.t1;Parent=g14420.t1 #PROT g14420.t1 g14420 MIPQEDVLFGSLTPRETLMYTAELRLPSTMPLWEKKARIDGLIADLYITRCADTIIGDENQRGISGGQRKRVSIAMELITNPSVLFVDEPTSGLDSTTALEVVQILRKLGDGGRNVICTIHQPSYDCFKSFHDLLLLARGEVVYFGEVPGMVTYFERYGIKCPEFGNPIEYVMDQTEKPLEDGRTLARAWFDAKAEDGGSRLMRRGSSIANVGIGEYDYPNSLAHQTWTLTKRSSWMTIKDAGQFNVRLGSSIIIGILIGLTYLKQDNDQGSYQDRISVMFIVSAFVL* # PASA_UPDATE: g679.t1, single gene model update, valid-1, status:[pasa:asmbl_9127,status:12], valid-1 NODE_738_length_18266_cov_53.1168 . gene 80 4020 . - . ID=g679;Name=g679.t1 NODE_738_length_18266_cov_53.1168 . mRNA 80 4020 . - . ID=g679.t1;Parent=g679;Name=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 3949 4020 . - . ID=g679.t1.exon1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 3949 4020 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 3734 3813 . - . ID=g679.t1.exon2;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 3734 3813 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 3517 3607 . - . ID=g679.t1.exon3;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 3517 3607 . - 1 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 3298 3372 . - . ID=g679.t1.exon4;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 3298 3372 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 3012 3119 . - . ID=g679.t1.exon5;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 3012 3119 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 2673 2783 . - . ID=g679.t1.exon6;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 2673 2783 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 2206 2313 . - . ID=g679.t1.exon7;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 2206 2313 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 2034 2075 . - . ID=g679.t1.exon8;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 2034 2075 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 1737 1825 . - . ID=g679.t1.exon9;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 1737 1825 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 1507 1573 . - . ID=g679.t1.exon10;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 1507 1573 . - 1 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 1015 1166 . - . ID=g679.t1.exon11;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 1015 1166 . - 0 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 508 682 . - . ID=g679.t1.exon12;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 508 682 . - 1 ID=cds.g679.t1;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . exon 80 263 . - . ID=g679.t1.exon13;Parent=g679.t1 NODE_738_length_18266_cov_53.1168 . CDS 80 263 . - 0 ID=cds.g679.t1;Parent=g679.t1;3_prime_partial=true #PROT g679.t1 g679 MFLNTPFADDSRKIVVGVCAMDKKAQSKPMRMILDGLRKSGDFEIVQFGDNVILNEPIQNWPLCDCLISFFSTGFPLSKAEGYVALRKPYVLNDLAMQRTLWNRHTVYEVLKAHGIPVPRHAVVDRDSGMDQYLEEHEDYIEPHFRPHTSQVNGIRFTKPFVEKPISGEDHNIVIYYPKSAGGGSQRLFRKVGDRSSEFRSNVSNVRQEGSYMYEDFLTTEGTDLKVYTCGPNYAHAEARKSPTVDGKVQRDKDGKEVRYPVMLSPEEKDISRKLCIAFKQTVCGFDLLRTNGNSYVCDVNGWSFVKNSTKYIEDCVAVLRDTFILHCAPHRLQRRSRQFVSNPAEVTALDEIELLDGGTLAAADADELRCVIAVVRHGDRTPKQKMKMKVTNAQFLELFGRFGSSRKELKLKTAPQLQELLDITRGLLVDHSDAEDSDTEESRGRLLQMR # ORIGINAL: g681.t1 original gene structure, not modified by PASA NODE_738_length_18266_cov_53.1168 AUGUSTUS gene 6025 13651 . + . ID=g681;Name=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS mRNA 6025 13651 . + . ID=g681.t1;Parent=g681;Name=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 6025 6071 . + . ID=g681.t1.exon1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 6025 6071 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 6202 6305 . + . ID=g681.t1.exon2;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 6202 6305 . + 1 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 6428 6517 . + . ID=g681.t1.exon3;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 6428 6517 . + 2 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 6625 6743 . + . ID=g681.t1.exon4;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 6625 6743 . + 2 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 6859 6972 . + . ID=g681.t1.exon5;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 6859 6972 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 7072 7153 . + . ID=g681.t1.exon6;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 7072 7153 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 7252 7319 . + . ID=g681.t1.exon7;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 7252 7319 . + 2 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 7451 7540 . + . ID=g681.t1.exon8;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 7451 7540 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 7650 7792 . + . ID=g681.t1.exon9;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 7650 7792 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 7970 8153 . + . ID=g681.t1.exon10;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 7970 8153 . + 1 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 8270 8754 . + . ID=g681.t1.exon11;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 8270 8754 . + 0 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 8862 8946 . + . ID=g681.t1.exon12;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 8862 8946 . + 1 ID=cds.g681.t1;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS exon 9044 13651 . + . ID=g681.t1.exon13;Parent=g681.t1 NODE_738_length_18266_cov_53.1168 AUGUSTUS CDS 9044 13651 . + 0 ID=cds.g681.t1;Parent=g681.t1 #PROT g681.t1 g681 MDSINVSIRVRPLNQREINNAQGQTWQLDGNTITQCTDRGRPIPSASYTFDRIFAMNSRTIDVFDSIAKSIIVSAMEGVNGTIFAYGQTSSGKTHTMKGLQTEPGIIPLAVQQVFSYIEQSPDREFLLRVSYLEIYNEVISDLLNPTSTNLKIRENPSGDIFVGDLSEEVVVSPNQILALMEAGEAHRHTGETNMNERSSRSHTIFRMVIESRERSSESESVKDGRRSIDGAILVSSLNLVDLAGSERISQTGAEGIRLKEGGFINKSLLTLGTVIAKLSEGVKESGHIPYRDSKLTRILQPSLGGNARTAIICTVTAATVHAEETLSTLKFANRAKTIKNKPVINEVTTNEALLKRYRREINELKRQLSESACGIDANVLQQLQTEKQRVEADKEAMAQLLREKETRSAIQEQKIERLTRLIITSSNQGSNVEAAVPAQPAAAKARSVRRETWWAGARRSQIVPGILAPAAQVAAVVEEKEPAVKTAELDSADAVPNVESAGRQSMMRLSIMRQSVSGGKDLFAAPKKQVKFPKTKAEDKEAPVTSSTRIRELEEDVRGYQEQVKTLEELLEQSNEHLQKLIEGEATAADELARELEVVKEERDDARASLLHASARTDTVVSELEEARQREADHLAQISALRETLDEERARGGATEESLDFARAELEAVSSAVGDVHAAQSLEVELLRAEYVNTKEMSDAEIAALRTAIEELEGRLRVMAIEQQEWQSKAKELTGDKEYLEDQVAQLSLAIAEANGRADSVASIAGSGEMDALRVELEAAREQCAATSQQLEESEAEWHELREMLVHEAGQMETELRETTLLNENLRGELDVALGELEEMRNQLSDAQVALDVSQEKQNREEQARRANEAVALARATAEAETLRVEVAAANEKIKTLEADLLASEEIREAEALKLQWDVEMRTPATPDTTELPCKQCVLLGEEVSVKLATAGEELANARRELSDSIAQTNVLQEQLYSANNAAEEHSKALEMIRASLDIALADNLALSESIQDLASAQHSDRDVQDAISRDEIASLERDVAEMSAECSRLREMVTAAAVREKELESKYESLATESHDARSQVGAALQAAAASAEEVVAVRSTIARLEGELAQMATCAESLEASLARESHRSAQLEEKAAGLAAEMASQHVNMDACARNIEQLELAVSLSREQLERAETARNELVQENDALKHRLAELVAIADDRDRLAHEHDEQAQQVHRAESRAEAVEADLQRMSSQVQEFESQLQAATEELVNARAELKVERENRTATEKELAAVRTEREKEKEKQSHAPTEVARLREELAQLRRESKQSAQQVAAAQKDRDAAGKEQEKWASKLEKLESRVKDAMQAKSALAAEKAALESELRDVRHHSTAMEKESDRIRKGAAAQEERVKEATLAAETAEKRRENDVAAAEAQLQQARVALKLATEEVGSLSERCDALQQAVFEANGIRQELEAALGALQTTGETLAEEVERLSTERAELELAVAAANNKAAAFEASAAHSIEANDRRDSELQAVYEQLTEMSLRAEESESALQSMRDDAREAHEQLANAIRALEGDNGRLRHQLAAAEHSMRSLEDKARESAEMKQSLEAQLSSVREEHAAAVEYSQRLERQLADASDRLESISSSESEFSALRAAHDALVRDSKRMSVELTTAEQRASALQKDLDIVNGGMYSEIEDLRRHIDELEAHGKGSSAESDAAFAEVGRLKAKIDVGMKELVRLTAELAASRAAQTEACSEVEGLRRVVSAFEEQVAEAASHINTLSERLEEESAHSEAAKQRISEVEASCRTVEQRARNAEKEAAEYRAVVDEMESHLDDAVAAVQSERARADAACVTAAQLRRDLETIVATFGKQEQDSGASAHSSSADRLRESMAQMQGECERLAERVRELERQLAAAESELVLRGVAESSAGDRSEILDSSFGDGRALMMQALKSEVDEKGRQIAALHDEIRTLRLVKNNETAKYIALQDENRRLQDELVSSSRAHDDGPIKARQTGALARIDSNNKENAGHTHSANQPLTLSAKATSGAAGVNRLATGGARAAAYAARPQPVDQEESAGECKQQ* # PASA_UPDATE: g680.t1, single gene model update, valid-1, status:[pasa:asmbl_9125,status:12], valid-1 NODE_738_length_18266_cov_53.1168 . gene 4970 5911 . + . ID=g680;Name=g680.t1 NODE_738_length_18266_cov_53.1168 . mRNA 4970 5911 . + . ID=g680.t1;Parent=g680;Name=g680.t1 NODE_738_length_18266_cov_53.1168 . five_prime_UTR 4970 4980 . + . ID=g680.t1.utr5p1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . exon 4970 5121 . + . ID=g680.t1.exon1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . CDS 4981 5121 . + 0 ID=cds.g680.t1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . exon 5208 5263 . + . ID=g680.t1.exon2;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . CDS 5208 5263 . + 0 ID=cds.g680.t1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . exon 5381 5499 . + . ID=g680.t1.exon3;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . CDS 5381 5499 . + 1 ID=cds.g680.t1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . exon 5617 5911 . + . ID=g680.t1.exon4;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . CDS 5617 5822 . + 2 ID=cds.g680.t1;Parent=g680.t1 NODE_738_length_18266_cov_53.1168 . three_prime_UTR 5823 5911 . + . ID=g680.t1.utr3p1;Parent=g680.t1 #PROT g680.t1 g680 MASNSADVSAVNPQSASTPANGKARVAVTDLGFFLGIARRIRRKEYEPTAEEKPILDSLELKLLFGIAPGGAFTAAATHWLFIRAVQRESMPKSQLVRILPKVHIASFVFGGALGTFWLATVLGHQIRRLGPSSPVSVEYCGGRYAQTTLVQPDAAVAVPGTTEHSRAAGNCD* # PASA_UPDATE: g682.t1, single gene model update, valid-1, status:[pasa:asmbl_9126,status:12], valid-1 NODE_738_length_18266_cov_53.1168 . gene 14171 18168 . + . ID=g682;Name=g682.t1 NODE_738_length_18266_cov_53.1168 . mRNA 14171 18168 . + . ID=g682.t1;Parent=g682;Name=g682.t1 NODE_738_length_18266_cov_53.1168 . five_prime_UTR 14171 14331 . + . ID=g682.t1.utr5p1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 14171 14434 . + . ID=g682.t1.exon1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 14332 14434 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 14592 14791 . + . ID=g682.t1.exon2;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 14592 14791 . + 2 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 15053 15196 . + . ID=g682.t1.exon3;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 15053 15196 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 15423 15803 . + . ID=g682.t1.exon4;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 15423 15803 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 16039 16293 . + . ID=g682.t1.exon5;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 16039 16293 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 16486 16737 . + . ID=g682.t1.exon6;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 16486 16737 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 16894 17061 . + . ID=g682.t1.exon7;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 16894 17061 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 17204 17323 . + . ID=g682.t1.exon8;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 17204 17323 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 17539 17698 . + . ID=g682.t1.exon9;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 17539 17698 . + 0 ID=cds.g682.t1;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . exon 17993 18168 . + . ID=g682.t1.exon10;Parent=g682.t1 NODE_738_length_18266_cov_53.1168 . CDS 17993 18168 . + 2 ID=cds.g682.t1;Parent=g682.t1 #PROT g682.t1 g682 MDSRGDDGDNRPGSGHRASSVPELPDIGTNGSNNSRRPSSGTSRGDGEDRVEPLPPPRGKTAGADYAQMIINNARLPVKQLRKGSVAMDDTSLLTPSIWKSFGSSSGVARLMYRTSYGLETEFPLVEEHVTIGRKSCNTIRLNDIQISKEHCVIERRQDGYAIRDLGSSNGVIVNRRKVKEKVLADRDEIELGRVRLVFTVASPAGAGPFDGHPLGFAARYRAGSMSTTGTLPSGADGAAAAADGGDAGGGASSEKDRQLRNYVTIVPDKHDFDQKVVVHEAIEDAALRKEFLPSSEVTDIEILRQDYEKLRVCHEISRIGPQDLNAMLEKMIDLLFSILPADHGVVMLKDEETGTFDIMKVKVRNGTKHVGEIKLSATILNHVTHYRTSLIASDAFYDPRFSGSNSIVRESIRAVLVVPLITHDDVIGVLQLDSRERVGAFSEKDLHLVKAVANQAAVAIQNSMLLRRVEAEAKTREQLDRFLPPQVVERVLRGKGEIKRGGRELVGTVVFADIRGFTRMSEKASGPQEIVDILNDYFERLVSIVFRRQGILDKYIGDALMAVFGTLDSEIDPVYNSVAAAIEFRDAIRVMNAERAQLNLDPIGIGVGVNTGSLVAGFVGCHQRLEYTCIGDTVNTSSRICDMAAADQVCT* # PASA_UPDATE: g13826.t1, single gene model update, valid-1, status:[pasa:asmbl_1355,status:3], valid-1 NODE_1367_length_11740_cov_40.5082 . gene 7210 11092 . + . ID=g13826;Name=g13826.t1 NODE_1367_length_11740_cov_40.5082 . mRNA 7210 11092 . + . ID=g13826.t1;Parent=g13826;Name=g13826.t1 NODE_1367_length_11740_cov_40.5082 . five_prime_UTR 7210 7448 . + . ID=g13826.t1.utr5p1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 7210 7597 . + . ID=g13826.t1.exon1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 7449 7597 . + 0 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 7805 7835 . + . ID=g13826.t1.exon2;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 7805 7835 . + 1 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 8015 8145 . + . ID=g13826.t1.exon3;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 8015 8145 . + 0 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 8398 10267 . + . ID=g13826.t1.exon4;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 8398 10267 . + 1 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 10410 10538 . + . ID=g13826.t1.exon5;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 10410 10538 . + 0 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . exon 10711 11092 . + . ID=g13826.t1.exon6;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . CDS 10711 10854 . + 0 ID=cds.g13826.t1;Parent=g13826.t1 NODE_1367_length_11740_cov_40.5082 . three_prime_UTR 10855 11092 . + . ID=g13826.t1.utr3p1;Parent=g13826.t1 #PROT g13826.t1 g13826 MVRIMIKGGVWKNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWMEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYERLLDQAQQKEEGGPSEDPRRLRPGEIDPQPETKPARPDPVDMDEDEKEMLSEAKARLANTQGKKAKRKAREKQLDEARRLAMLQKRRELRAAGIEMTEKRRKRGLIDYNAEIPFEQKAPKGFYDVSEEISREKQADFKPLSLRQLDGKSATDVEMEERKKDKLRKKRKLESGDAAITQANRMNTGEPSAKRSKLVLPAPQVSETELEEIVKMGYASEEARQAVEGARAGTNAATRGLLSEYPMTPAMAGMTPSNALRTPRTPAHHDVILHEAQALIAMTNQESVLKGGSSVAVESALGYDGITPRKQVIQTPNVTLGTPFRTPAGGAPVAASARGKAGAFPSAAMSTPGSVVGGVSGRTPMRDSLNINAGADPSEVGAGVGSLRAALASLPKPKNDFEITVPEDEREGVDEDDADSDDDMEEDAADRDARRERVRAQKERILMKRRSQAVQMNLPRPMDVPASLTKASDAAQTGNALALADDLIKAEMALMLQHDLSRYPVPGAPPQPKVASIEDDFADEELEAARAMIAEEAAAMRGRAREEGHPIDDKGEIDSGLFWQTWRECLEEITYIPSQQRYGRTPLVDKKDRLDALEAELNSNRGHMRREEKRAKNMETKMDVLTKGYQNVAVSTIKQINELAERIAEMARTRKGFELLHTNEKGAILRRVETLSEDVAQQQRRETHLQLAYKNLITERENVIERARKTVEVANGAAQS* # ORIGINAL: g13822.t1 original gene structure, not modified by PASA NODE_1367_length_11740_cov_40.5082 AUGUSTUS gene 314 865 . + . ID=g13822;Name=g13822.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS mRNA 314 865 . + . ID=g13822.t1;Parent=g13822;Name=g13822.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS exon 314 865 . + . ID=g13822.t1.exon1;Parent=g13822.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS CDS 314 865 . + 0 ID=cds.g13822.t1;Parent=g13822.t1 #PROT g13822.t1 g13822 MNALAVTTIRPNIGVIEYPDDKYQVKVADIPGLIEGAHNNAGMGHKFLRHIERTKVILYVVDVNGFQLNDKSPFRTAEQTLELLMDELAFYQEGLSQRPSLIAINKMDTVDADEKFDAFVGAMSDKLRRLCPSVEEILGISTMAGSGIETLKRTLRDMVERATPEVTSNPMDDWLHPNSARDR* # PASA_UPDATE: g13823.t1, single gene model update, valid-1, status:[pasa:asmbl_1356,status:12], valid-1 NODE_1367_length_11740_cov_40.5082 . gene 1386 3425 . - . ID=g13823;Name=g13823.t1 NODE_1367_length_11740_cov_40.5082 . mRNA 1386 3425 . - . ID=g13823.t1;Parent=g13823;Name=g13823.t1 NODE_1367_length_11740_cov_40.5082 . five_prime_UTR 3365 3425 . - . ID=g13823.t1.utr5p1;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . exon 2844 3425 . - . ID=g13823.t1.exon1;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . CDS 2844 3364 . - 0 ID=cds.g13823.t1;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . exon 2449 2551 . - . ID=g13823.t1.exon2;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . CDS 2449 2551 . - 1 ID=cds.g13823.t1;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . exon 1386 1969 . - . ID=g13823.t1.exon3;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . CDS 1757 1969 . - 0 ID=cds.g13823.t1;Parent=g13823.t1 NODE_1367_length_11740_cov_40.5082 . three_prime_UTR 1386 1756 . - . ID=g13823.t1.utr3p1;Parent=g13823.t1 #PROT g13823.t1 g13823 MQCRAAITRGILAAAVRQPVCAPAALSRCMGTVARSRSPLQLRVGRPGDYVKSEKEQGFMRRTLDFFKRKKEKPLSEKQTLETNAAEIPRTTTAFPGSVGSGLLDNSDFMPPKPTKTEPSTSTKADSTKAAPKVKRNRAQPRAAVWTRKSKRSKGARILELQRRESLPQKYVIPRDVKKDLHDIASLYWGAAGFSDTEKFPSLEAKFQILNRACAQFKRDIPNPVLPKLRTIDDTVAFFSTAPKPRHVPTLFKINKSNRPANLIFKNAAPYQVGGRRS* # ORIGINAL: g13824.t1 original gene structure, not modified by PASA NODE_1367_length_11740_cov_40.5082 AUGUSTUS gene 3777 4205 . + . ID=g13824;Name=g13824.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS mRNA 3777 4205 . + . ID=g13824.t1;Parent=g13824;Name=g13824.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS exon 3777 4205 . + . ID=g13824.t1.exon1;Parent=g13824.t1 NODE_1367_length_11740_cov_40.5082 AUGUSTUS CDS 3777 4205 . + 0 ID=cds.g13824.t1;Parent=g13824.t1 #PROT g13824.t1 g13824 MSYMLAHLTNGWQVDQAIMSEEDRVVVIRFGHDWDPTCMKMDETLYAIAEKVKAFAVVYLVDITEVSDFNKMYELYDPCTVMFFFRNKHMMIDLGTGNNNKITWAMEEKQELIDIIETVYRGARKGRGLVIAPKDYSTKYRY* # PASA_UPDATE: g13825.t1, single gene model update, valid-1, status:[pasa:asmbl_1357,status:12], valid-1 NODE_1367_length_11740_cov_40.5082 . gene 4926 6807 . - . ID=g13825;Name=g13825.t1 NODE_1367_length_11740_cov_40.5082 . mRNA 4926 6807 . - . ID=g13825.t1;Parent=g13825;Name=g13825.t1 NODE_1367_length_11740_cov_40.5082 . exon 6658 6807 . - . ID=g13825.t1.exon1;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . CDS 6658 6807 . - 0 ID=cds.g13825.t1;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . exon 5921 6554 . - . ID=g13825.t1.exon2;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . CDS 5921 6554 . - 0 ID=cds.g13825.t1;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . exon 5478 5628 . - . ID=g13825.t1.exon3;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . CDS 5478 5628 . - 2 ID=cds.g13825.t1;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . exon 4926 5246 . - . ID=g13825.t1.exon4;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . CDS 5003 5246 . - 1 ID=cds.g13825.t1;Parent=g13825.t1 NODE_1367_length_11740_cov_40.5082 . three_prime_UTR 4926 5002 . - . ID=g13825.t1.utr3p1;Parent=g13825.t1 #PROT g13825.t1 g13825 MANSNAVAREAVALFKSRFGRDPDICTCAPGRVNLIGEHTDYNEGFVFPMALEYVTVIAGSKSSNAECNIVTAADSLQTHNAARFSPDKATFAKGEPFWANYVKGVAAQFDSIPAFDAAVASSVPLGGGLSSSAAIEVASHLFFEQLTGVHVDDRRRALNCQEAEHSYADMPCGIMDQFISVMGKSNHALLIDCRSLEGRLVPMSDPGVVVLVTNSNVKHQLTGSEYPTRRRQCEEAVAVLRAKYGDSIHSLRNVTLEQLEDTKDKLDPIVYRRARHVIGENDRTERGAKALEAGDYVLFGKLMRESHNSLRDDYEVSCPELDVLVDAAMSHPDVFGSRMTGGGFGGCTVTLAKADKAKEIAQHILSLYPRGTCFTTRPGDGARVLDAKQFL* # PASA_UPDATE: g9437.t1, single gene model update, valid-1, status:[pasa:asmbl_6625,status:12], valid-1 NODE_3834_length_2656_cov_62.8532 . gene 490 2632 . - . ID=g9437;Name=g9437.t1 NODE_3834_length_2656_cov_62.8532 . mRNA 490 2632 . - . ID=g9437.t1;Parent=g9437;Name=g9437.t1 NODE_3834_length_2656_cov_62.8532 . five_prime_UTR 1773 2632 . - . ID=g9437.t1.utr5p1;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . exon 1627 2632 . - . ID=g9437.t1.exon1;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . CDS 1627 1772 . - 0 ID=cds.g9437.t1;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . exon 820 849 . - . ID=g9437.t1.exon2;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . CDS 820 849 . - 1 ID=cds.g9437.t1;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . exon 490 682 . - . ID=g9437.t1.exon3;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . CDS 622 682 . - 1 ID=cds.g9437.t1;Parent=g9437.t1 NODE_3834_length_2656_cov_62.8532 . three_prime_UTR 490 621 . - . ID=g9437.t1.utr3p1;Parent=g9437.t1 #PROT g9437.t1 g9437 MRLGRLMAVGLMFITLSLMLYALLEQQESTFGGNELLRGSSKLGDVEDRKGLWGDPGRRRAMHLRRVLFRPTWSPKNA* # ORIGINAL: g8491.t1 original gene structure, not modified by PASA NODE_3493_length_3343_cov_35.8081 AUGUSTUS gene 435 3109 . + . ID=g8491;Name=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS mRNA 435 3109 . + . ID=g8491.t1;Parent=g8491;Name=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 435 620 . + . ID=g8491.t1.exon1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 435 620 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 860 965 . + . ID=g8491.t1.exon2;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 860 965 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 1263 1672 . + . ID=g8491.t1.exon3;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 1263 1672 . + 2 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 1838 2002 . + . ID=g8491.t1.exon4;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 1838 2002 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 2251 2400 . + . ID=g8491.t1.exon5;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 2251 2400 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 2702 2794 . + . ID=g8491.t1.exon6;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 2702 2794 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS exon 2993 3109 . + . ID=g8491.t1.exon7;Parent=g8491.t1 NODE_3493_length_3343_cov_35.8081 AUGUSTUS CDS 2993 3109 . + 0 ID=cds.g8491.t1;Parent=g8491.t1 #PROT g8491.t1 g8491 MISMDLSFCICPEQDMVTRYSGKRIGILAPHIFSTAEAAYDNIKVTPMNQSVIISGESGAGKTETTKLILQYLTAVTQNPQWIEQQIMEANTIMEAFGNAKTVRNNNSSRFGKFMQVCFNPQLQIKGCIIEDYLLEQSRVVFQAEEERNYHVFYQLCAGCAANGEDRDKFMLEAAEKYGYMNQSGCIKIGDVDDKKDFEQLRLAMTVLNITPEMQDSIFCVLSSILHLSNLKFKDVDGESVKFLPEDEDIVRKVCKLMQVDEAGIKKTLTLRQLNVRGSVTEIPLKHKEAIENRDAASKALYSRIFSWLVRHINTCINPGTDTKRFVGVLDIFGFENFKVNSFEQLCINFTNEKLHKFFNHYVFSLEQAEYQKEGVNVENIKWVDNQECLDLIEKVRCFGLAYLVYYV* # PASA_UPDATE: g7617.t1, single gene model update, valid-1, status:[pasa:asmbl_4909,status:12], valid-1 NODE_2731_length_5300_cov_42.5405 . gene 4664 5151 . - . ID=g7617;Name=g7617.t1 NODE_2731_length_5300_cov_42.5405 . mRNA 4664 5151 . - . ID=g7617.t1;Parent=g7617;Name=g7617.t1 NODE_2731_length_5300_cov_42.5405 . exon 4664 5151 . - . ID=g7617.t1.exon1;Parent=g7617.t1 NODE_2731_length_5300_cov_42.5405 . CDS 4831 5151 . - 0 ID=cds.g7617.t1;Parent=g7617.t1 NODE_2731_length_5300_cov_42.5405 . three_prime_UTR 4664 4830 . - . ID=g7617.t1.utr3p1;Parent=g7617.t1 #PROT g7617.t1 g7617 MFGVWCIALTVPAHDLAYYVQSHFCGKQLEPKDLEIRNALAEISALRSKDRKSEKEFATRVMSHSSASIDGDAPVDDDTADADNISLNSINLGERPAHWQSEDVDD* # ORIGINAL: g7616.t1 original gene structure, not modified by PASA NODE_2731_length_5300_cov_42.5405 AUGUSTUS gene 114 3121 . + . ID=g7616;Name=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS mRNA 114 3121 . + . ID=g7616.t1;Parent=g7616;Name=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS exon 114 193 . + . ID=g7616.t1.exon1;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS CDS 114 193 . + 0 ID=cds.g7616.t1;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS exon 632 740 . + . ID=g7616.t1.exon2;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS CDS 632 740 . + 1 ID=cds.g7616.t1;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS exon 1007 1734 . + . ID=g7616.t1.exon3;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS CDS 1007 1734 . + 0 ID=cds.g7616.t1;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS exon 2176 3121 . + . ID=g7616.t1.exon4;Parent=g7616.t1 NODE_2731_length_5300_cov_42.5405 AUGUSTUS CDS 2176 3121 . + 1 ID=cds.g7616.t1;Parent=g7616.t1 #PROT g7616.t1 g7616 MLLSPDDDMRIAQLLQQILQACGHRSNTEWQTSLRKELARFGFAGLVDGVDGGGFFALSIVDKIRVMMLLCHRLLDYPDAGESLPERLEPIHTDTRGRLYWLPVPDRLYREEVTELPKKKPPPPLPKKRPPPKSRSRSRGIPVECDDDGGVGVAVATESAGADAAAVAAPGLSELLAKTVGSQTEEGYTRTWAMIAQTNSEFVAVAQELKKLRNVADVKFSKHIVDVLIPAADEERACREKAIRKRLAVEMPRRSSGRIAERQRMEELERQLAEEAAEAERRQRLAERRGRAVEEEQRLQNARDERIRLRDQARDDARLQRQLRAEGRTLEPLSRDPSEGNGVHHVHGAEVCDAQSNDASQGDTHNAHDDASSVSARGSKKRKLDADEASDGTVRSPLKIRFQLSSATAEKPGSYSVVLVGNHTSTGTDAAVSVNGTSKAVVTSGVEGPVSGDHVASNNATSPMDTSRSGPTPATEKDILVTEDSDAMDVDAAVHNVLPATAANVSAAATPTDVCANAAAKFDTRPPSRHVHTALSAVSGVPSVLSVADRKDTLFPALSAATDTSFPAESDVTAEHSSEKQSTVEQSASDGTAKLSVPAADHMRDFDVAATLAALTHSTH* # ORIGINAL: g8942.t1 original gene structure, not modified by PASA NODE_4870_length_1181_cov_30.5741 AUGUSTUS gene 77 879 . + . ID=g8942;Name=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS mRNA 77 879 . + . ID=g8942.t1;Parent=g8942;Name=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS exon 77 228 . + . ID=g8942.t1.exon1;Parent=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS CDS 77 228 . + 0 ID=cds.g8942.t1;Parent=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS exon 393 534 . + . ID=g8942.t1.exon2;Parent=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS CDS 393 534 . + 1 ID=cds.g8942.t1;Parent=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS exon 739 879 . + . ID=g8942.t1.exon3;Parent=g8942.t1 NODE_4870_length_1181_cov_30.5741 AUGUSTUS CDS 739 879 . + 0 ID=cds.g8942.t1;Parent=g8942.t1 #PROT g8942.t1 g8942 VAVPVHIAKILSFPEVVNDHNIDRLRQLVINGPDMHPGANFIEAPATKMKRFLKYGNRKQMARELKIGDVVERHLCDGDVVLFNRQPSLHKLSIMCHFARVMPHRTFRFNECVCTPYNADFDGDEMNMHVPQTEEARAEALVLMG # ORIGINAL: g8199.t1 original gene structure, not modified by PASA NODE_4075_length_2229_cov_65.39 AUGUSTUS gene 168 1821 . + . ID=g8199;Name=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS mRNA 168 1821 . + . ID=g8199.t1;Parent=g8199;Name=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS exon 168 242 . + . ID=g8199.t1.exon1;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS CDS 168 242 . + 0 ID=cds.g8199.t1;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS exon 504 590 . + . ID=g8199.t1.exon2;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS CDS 504 590 . + 0 ID=cds.g8199.t1;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS exon 806 856 . + . ID=g8199.t1.exon3;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS CDS 806 856 . + 0 ID=cds.g8199.t1;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS exon 1095 1210 . + . ID=g8199.t1.exon4;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS CDS 1095 1210 . + 0 ID=cds.g8199.t1;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS exon 1629 1821 . + . ID=g8199.t1.exon5;Parent=g8199.t1 NODE_4075_length_2229_cov_65.39 AUGUSTUS CDS 1629 1821 . + 1 ID=cds.g8199.t1;Parent=g8199.t1 #PROT g8199.t1 g8199 MDEFYTKIREPGHAGAVFFAVCRGKVSEGLDFADTHGRAVVITGIPFPALQDRRVKLKKAFLDESMGKDAKTLSGQDWYKQQATRAVNQAVGRVIRHRRDYGAIILADERFANAAAIAQLPVWVRPYVKTYQTFGDAIGSMTRFFRAAEADPTLEVSHEVTWGSCGLCLLCLL* # ORIGINAL: g9993.t1 original gene structure, not modified by PASA NODE_3958_length_2458_cov_38.3628 AUGUSTUS gene 297 1052 . - . ID=g9993;Name=g9993.t1 NODE_3958_length_2458_cov_38.3628 AUGUSTUS mRNA 297 1052 . - . ID=g9993.t1;Parent=g9993;Name=g9993.t1 NODE_3958_length_2458_cov_38.3628 AUGUSTUS exon 882 1052 . - . ID=g9993.t1.exon1;Parent=g9993.t1 NODE_3958_length_2458_cov_38.3628 AUGUSTUS CDS 882 1052 . - 0 ID=cds.g9993.t1;Parent=g9993.t1 NODE_3958_length_2458_cov_38.3628 AUGUSTUS exon 297 485 . - . ID=g9993.t1.exon2;Parent=g9993.t1 NODE_3958_length_2458_cov_38.3628 AUGUSTUS CDS 297 485 . - 0 ID=cds.g9993.t1;Parent=g9993.t1 #PROT g9993.t1 g9993 MATYECHTKGIGKEGKKRDSSVSHTTRAATDTPIADIQLNSAGAIEVKEMFSDGRKREANMVTRAMRWLWADLGEYRAKLAQLHSGESMDTEVLDSVAVREKLSLQSKKVGWMRIAIGI* # ORIGINAL: g9535.t1 original gene structure, not modified by PASA NODE_3714_length_2907_cov_38.5205 AUGUSTUS gene 230 2474 . - . ID=g9535;Name=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS mRNA 230 2474 . - . ID=g9535.t1;Parent=g9535;Name=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS exon 2326 2474 . - . ID=g9535.t1.exon1;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS CDS 2326 2474 . - 1 ID=cds.g9535.t1;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS exon 1830 1916 . - . ID=g9535.t1.exon2;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS CDS 1830 1916 . - 2 ID=cds.g9535.t1;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS exon 1406 1512 . - . ID=g9535.t1.exon3;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS CDS 1406 1512 . - 2 ID=cds.g9535.t1;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS exon 847 1010 . - . ID=g9535.t1.exon4;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS CDS 847 1010 . - 0 ID=cds.g9535.t1;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS exon 230 579 . - . ID=g9535.t1.exon5;Parent=g9535.t1 NODE_3714_length_2907_cov_38.5205 AUGUSTUS CDS 230 579 . - 1 ID=cds.g9535.t1;Parent=g9535.t1 #PROT g9535.t1 g9535 GGGVPYGTVSAVKRRNLLIGGVVFVVVAIALAIGLGVGLSHNGSHDDNGGGQPVWGGVRLPSSVQPVHYTLAIMPELSANPPVFTGSLRINITVSEPTWDIALHTVNHKFSSILICARKCRGLSNGLPIEIRQVPEWEYIVLRSNQQFLPGVYEIYVAYTGTMSNDLLGFYRSSYADANGTTHYLATTKFEPTYARRAFPCFDEPAMKATYSFIALVLDQSTTPVVLSNTPEITDRRIDGVPVTTVGGKSAVAQARYFMETPKMSTYLVAFVFSDFEAITSTFNQ # PASA_UPDATE: g7498.t1, single gene model update, valid-1, status:[pasa:asmbl_5717,status:12], valid-1 NODE_3206_length_4016_cov_43.6273 . gene 3556 4009 . + . ID=g7498;Name=g7498.t1 NODE_3206_length_4016_cov_43.6273 . mRNA 3556 4009 . + . ID=g7498.t1;Parent=g7498;Name=g7498.t1 NODE_3206_length_4016_cov_43.6273 . five_prime_UTR 3556 3661 . + . ID=g7498.t1.utr5p1;Parent=g7498.t1 NODE_3206_length_4016_cov_43.6273 . exon 3556 4009 . + . ID=g7498.t1.exon1;Parent=g7498.t1 NODE_3206_length_4016_cov_43.6273 . CDS 3662 4009 . + 0 ID=cds.g7498.t1;Parent=g7498.t1 #PROT g7498.t1 g7498 MASAPMSQDGSSPHSHTPSLAAHASLLDAQLPQPSPMVGVHVDGGDATAVYGREDPIQKHRSLHYRLLRPITAHVRAVLSTKKGRRLVFLAGVSGACFFLLFMAGHVTGSMGMWW* # ORIGINAL: g7497.t1 original gene structure, not modified by PASA NODE_3206_length_4016_cov_43.6273 AUGUSTUS gene 2560 3186 . - . ID=g7497;Name=g7497.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS mRNA 2560 3186 . - . ID=g7497.t1;Parent=g7497;Name=g7497.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS exon 2986 3186 . - . ID=g7497.t1.exon1;Parent=g7497.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS CDS 2986 3186 . - 0 ID=cds.g7497.t1;Parent=g7497.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS exon 2560 2892 . - . ID=g7497.t1.exon2;Parent=g7497.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS CDS 2560 2892 . - 0 ID=cds.g7497.t1;Parent=g7497.t1 #PROT g7497.t1 g7497 MAPNLSKLDPIVEKYAKHYVHVRPFFNNVEEQRKRFGIEHLQKPLPLGISEAGRPGCNPAFFPALETTKTFYSLADASVVEAPCSVLTIYNSFADRRHPALVSRGTCGIEERALDLVRLYVTSFVVWTLAVQRQVNSSDANERRKLWLLCLENGWGQKGVTAAFECSWTGGKIPTES* # ORIGINAL: g7496.t1 original gene structure, not modified by PASA NODE_3206_length_4016_cov_43.6273 AUGUSTUS gene 1132 2542 . - . ID=g7496;Name=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS mRNA 1132 2542 . - . ID=g7496.t1;Parent=g7496;Name=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS exon 2147 2542 . - . ID=g7496.t1.exon1;Parent=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS CDS 2147 2542 . - 0 ID=cds.g7496.t1;Parent=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS exon 1734 2055 . - . ID=g7496.t1.exon2;Parent=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS CDS 1734 2055 . - 0 ID=cds.g7496.t1;Parent=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS exon 1132 1520 . - . ID=g7496.t1.exon3;Parent=g7496.t1 NODE_3206_length_4016_cov_43.6273 AUGUSTUS CDS 1132 1520 . - 2 ID=cds.g7496.t1;Parent=g7496.t1 #PROT g7496.t1 g7496 MLHELQAFADENTLIIAFDEIGATAGIAPGVWIHLEDYSANRQTSDDVAARRLEEASGMFAECGGGDAQPADILYALRLLMLGLSDRGIVVAFADTDYSLAVLRDIDHRSPINGRLKLVKTFAAATDKEMRAALFSGQRSSDRAEWFQRARAEALATTKEDLRRLVTRISRRSHAIYTNFVGELQRAAVFTPPDGRSEKSCIGLSSTEADYYRSTNLVFATGDALTYDVTTEPVVVDILLLFNATVAINTVVNLVGDDPFATAARDPHIVWCRVSNAAHADLVFGVEVGGKKGIVAVQCKARAASVPRSNCLSWTVDEVNAIVAPAAERAKRPHPRKCGSSYRLTINELTPIPLFCCCIRADAMDCTL* # PASA_UPDATE: g5601.t1, single gene model update, valid-1, status:[pasa:asmbl_4232,status:12], valid-1 NODE_2403_length_6411_cov_41.4615 . gene 216 4299 . - . ID=g5601;Name=g5601.t1 NODE_2403_length_6411_cov_41.4615 . mRNA 216 4299 . - . ID=g5601.t1;Parent=g5601;Name=g5601.t1 NODE_2403_length_6411_cov_41.4615 . five_prime_UTR 3952 4299 . - . ID=g5601.t1.utr5p1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 3016 4299 . - . ID=g5601.t1.exon1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 3016 3951 . - 0 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 2553 2647 . - . ID=g5601.t1.exon2;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 2553 2647 . - 0 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 2111 2183 . - . ID=g5601.t1.exon3;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 2111 2183 . - 1 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 1813 1873 . - . ID=g5601.t1.exon4;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 1813 1873 . - 0 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 1330 1386 . - . ID=g5601.t1.exon5;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 1330 1386 . - 2 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 940 1014 . - . ID=g5601.t1.exon6;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 940 1014 . - 2 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 655 786 . - . ID=g5601.t1.exon7;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 655 786 . - 2 ID=cds.g5601.t1;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . exon 216 321 . - . ID=g5601.t1.exon8;Parent=g5601.t1 NODE_2403_length_6411_cov_41.4615 . CDS 216 321 . - 2 ID=cds.g5601.t1;Parent=g5601.t1;3_prime_partial=true #PROT g5601.t1 g5601 MVLQPLELADCQKDSPQFRSYLKTHEEAADEINDLIKNLLKQAKQSSDTCRSYSKAHRNFAQVLQEFNFERVGDVGTEDEVEIEGALSRFGTKLMELEDHREFMLEQANLVLTEPLETFRQVELGGMKEQKKAWDKESERFYGLLDKTLSLGAKKKDSVFMDADAQLEQERQALHGTSLAYVQKLTELQEKKKFEFVEKILAYMLGQMSFFHMAYESLKEMEPYITQLSLKLQNTRETFNTERELVGELMQKMINKGRVAENVNPQAASVEGYLMIQEKRKGGLGHTWGRHYCKYVRDDKRLTVLNASQGKLLPPEFYDVYTCTVCVPEVIDRRFCFEITSGDKLIVLQAMGQRDMDHWVACMTEGAMIPSRDGMGTPTIDRKKDVDVGGLIGIPFVDKCIQIIESRGLHHEGLYRLPGVQSKVNKLVTLGLENKPIIDDDDLDIKTLCSALKQYFRQLKKPLMTFEFHDELMFAIRIEDRTQRLMTLHSLLHRLPKDNFDVLKKVMAHLK # ORIGINAL: g5602.t1 original gene structure, not modified by PASA NODE_2403_length_6411_cov_41.4615 AUGUSTUS gene 4789 6336 . + . ID=g5602;Name=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS mRNA 4789 6336 . + . ID=g5602.t1;Parent=g5602;Name=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS exon 4789 4926 . + . ID=g5602.t1.exon1;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS CDS 4789 4926 . + 0 ID=cds.g5602.t1;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS exon 5082 5275 . + . ID=g5602.t1.exon2;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS CDS 5082 5275 . + 0 ID=cds.g5602.t1;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS exon 5360 5447 . + . ID=g5602.t1.exon3;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS CDS 5360 5447 . + 1 ID=cds.g5602.t1;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS exon 5878 5999 . + . ID=g5602.t1.exon4;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS CDS 5878 5999 . + 0 ID=cds.g5602.t1;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS exon 6227 6336 . + . ID=g5602.t1.exon5;Parent=g5602.t1 NODE_2403_length_6411_cov_41.4615 AUGUSTUS CDS 6227 6336 . + 1 ID=cds.g5602.t1;Parent=g5602.t1 #PROT g5602.t1 g5602 MGKMRNSRKLRENRHNATGMPTDADVEAAEAHGDLPALDGVPLIDKLKSLDPHERECACNSLANIVFDPNALGALLQGDTIATLSDRILDPVFDVRAEAAGALRHVYVLCWNLTIAGGDAVCERVSTQQLILSLLFNVEQCLTEAFAVVANPEPLTADAKSKHETVCRTLEQSFHCLWNLCECSDAALLKLTTSGHLPNIALAIQPAVLPPSMCIAA # PASA_UPDATE: g6708.t1, single gene model update, valid-1, status:[pasa:asmbl_8714,status:12], valid-1 NODE_655_length_19503_cov_43.3723 . gene 33 3095 . - . ID=g6708;Name=g6708.t1 NODE_655_length_19503_cov_43.3723 . mRNA 33 3095 . - . ID=g6708.t1;Parent=g6708;Name=g6708.t1 NODE_655_length_19503_cov_43.3723 . five_prime_UTR 3057 3095 . - . ID=g6708.t1.utr5p1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . five_prime_UTR 2895 2938 . - . ID=g6708.t1.utr5p2;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 3057 3095 . - . ID=g6708.t1.exon1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 2612 2938 . - . ID=g6708.t1.exon2;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . CDS 2612 2894 . - 0 ID=cds.g6708.t1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 2229 2346 . - . ID=g6708.t1.exon3;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . CDS 2229 2346 . - 2 ID=cds.g6708.t1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 1945 2085 . - . ID=g6708.t1.exon4;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . CDS 1945 2085 . - 1 ID=cds.g6708.t1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 772 1713 . - . ID=g6708.t1.exon5;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . CDS 772 1713 . - 1 ID=cds.g6708.t1;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . exon 33 260 . - . ID=g6708.t1.exon6;Parent=g6708.t1 NODE_655_length_19503_cov_43.3723 . CDS 33 260 . - 1 ID=cds.g6708.t1;Parent=g6708.t1;3_prime_partial=true #PROT g6708.t1 g6708 MDGSIPCNPVNVTALMEGARPQTPNIMRRTSGSAASGASSASTSVGGAIASVRAALKFEKGAQIPIVGPCKSLRILHLTDDGNHFKTQHVRVEQGDVLRFVLSPLLQSKNVRVFTNYPHDGKEFVRAKFHEIKWRTAHTPCAPFMFGERAADVGTTLAGAFDYYFTWCDDPDLAPSAEHPGAHPKHGAYGHFLVDPVLSINGTYLPMDSICLQTVITKCLGIHTTWEARLRVAAECGYNMIHFTPVQKLGESNSAYSLADQLVPNPNLFPNASTASADLAALVHMLETKYGILSMSDLVWNHTAHNSAWLDDHPEAGYNLVNSPHLTPAFVFDEALQHLSWQIGEKVFPALAGDFSTEEEVTLLMDHVRATLIPQMRLWEFYAVDVAAAVAQFKSLILSARHPTAIEGSQQAHAPIAHVVIGDIGSRRQWRVIDMERALLDFNFRSASPDESDAARVTRCSRAFEHAVNEANVPLYAAYDSDIATALNSIHNTVRGGYSGAVKEYDPDGYDPNRVLANNGWIWNGDPMVDFASDSSHAYVRREVIAWGDCVKLRYGRGRSDNPWLWEHMT # PASA_UPDATE: g6709.t1, single gene model update, valid-1, status:[pasa:asmbl_8715,status:12], valid-1 NODE_655_length_19503_cov_43.3723 . gene 3373 4005 . + . ID=g6709;Name=g6709.t1 NODE_655_length_19503_cov_43.3723 . mRNA 3373 4005 . + . ID=g6709.t1;Parent=g6709;Name=g6709.t1 NODE_655_length_19503_cov_43.3723 . five_prime_UTR 3373 3404 . + . ID=g6709.t1.utr5p1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . exon 3373 3443 . + . ID=g6709.t1.exon1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . CDS 3405 3443 . + 0 ID=cds.g6709.t1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . exon 3556 3634 . + . ID=g6709.t1.exon2;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . CDS 3556 3634 . + 0 ID=cds.g6709.t1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . exon 3712 3789 . + . ID=g6709.t1.exon3;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . CDS 3712 3789 . + 2 ID=cds.g6709.t1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . exon 3940 4005 . + . ID=g6709.t1.exon4;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . CDS 3940 3977 . + 2 ID=cds.g6709.t1;Parent=g6709.t1 NODE_655_length_19503_cov_43.3723 . three_prime_UTR 3978 4005 . + . ID=g6709.t1.utr3p1;Parent=g6709.t1 #PROT g6709.t1 g6709 MSERDLSQKPSGVEDRSTTSAKANCLQCRVIGSISFTGAGLYCMYQGRGLAPNNPAKKWLNIVGTGCLALAAWRLMP* # PASA_UPDATE: g6714.t1, single gene model update, valid-1, status:[pasa:asmbl_8717,status:12], valid-1 NODE_655_length_19503_cov_43.3723 . gene 15037 19363 . + . ID=g6714;Name=g6714.t1 NODE_655_length_19503_cov_43.3723 . mRNA 15037 19363 . + . ID=g6714.t1;Parent=g6714;Name=g6714.t1 NODE_655_length_19503_cov_43.3723 . five_prime_UTR 15037 15258 . + . ID=g6714.t1.utr5p1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 15037 15390 . + . ID=g6714.t1.exon1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 15259 15390 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 15540 15647 . + . ID=g6714.t1.exon2;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 15540 15647 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 15800 15904 . + . ID=g6714.t1.exon3;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 15800 15904 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 16063 16188 . + . ID=g6714.t1.exon4;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 16063 16188 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 16528 16589 . + . ID=g6714.t1.exon5;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 16528 16589 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 16771 16867 . + . ID=g6714.t1.exon6;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 16771 16867 . + 1 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 17120 17194 . + . ID=g6714.t1.exon7;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 17120 17194 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 17329 17411 . + . ID=g6714.t1.exon8;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 17329 17411 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 17675 17786 . + . ID=g6714.t1.exon9;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 17675 17786 . + 1 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 17897 17975 . + . ID=g6714.t1.exon10;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 17897 17975 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 18221 18345 . + . ID=g6714.t1.exon11;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 18221 18345 . + 2 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 18658 18747 . + . ID=g6714.t1.exon12;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 18658 18747 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 18889 18998 . + . ID=g6714.t1.exon13;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 18889 18998 . + 0 ID=cds.g6714.t1;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . exon 19285 19363 . + . ID=g6714.t1.exon14;Parent=g6714.t1 NODE_655_length_19503_cov_43.3723 . CDS 19285 19363 . + 1 ID=cds.g6714.t1;Parent=g6714.t1;3_prime_partial=true #PROT g6714.t1 g6714 MSENGSNHASQPQLTNEKEIPDGVMPLFFTSQSCELFNCKPGVQVTAEHPYVLIKKDAVIDDFKNRAAISDFHPAKEQLLKYPGDEILMVYDEDFKYGENFYICLTEEAKALLLKVPEEAPAVVETVDAPKQRPPEWISLGSDKEIDAESCQNTRELVITTVLRKRKEFGRPFLFRDRGPRDSKDGYVEYKSYSDKNFDIRILELDKGIQAVPIVVESMCQTNWLQPVDAAIEYEPREYDEEKQKEILESAELGQFVENVRLRFERALQQNEIMDVFNDDLVDIGDEEGLFGAKSDSILKEHQSFTDLKFSKDKSISCIDWHPTIRGVVAVSCTERLTFDERVTDAARVLMTPSLILVWSFQDPIHPQLILEAPDDVTVFRFNPLEPHLLAGGCMNGQLVLWDLTEYTEQLVSQLPTKELFGDDDKKELHTAIVKHTVVSSIESSHKAAITDLHWLPADAE # ORIGINAL: g6713.t1 original gene structure, not modified by PASA NODE_655_length_19503_cov_43.3723 AUGUSTUS gene 13579 14659 . + . ID=g6713;Name=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS mRNA 13579 14659 . + . ID=g6713.t1;Parent=g6713;Name=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 13579 13779 . + . ID=g6713.t1.exon1;Parent=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 13579 13779 . + 0 ID=cds.g6713.t1;Parent=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 14031 14201 . + . ID=g6713.t1.exon2;Parent=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 14031 14201 . + 0 ID=cds.g6713.t1;Parent=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 14504 14659 . + . ID=g6713.t1.exon3;Parent=g6713.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 14504 14659 . + 0 ID=cds.g6713.t1;Parent=g6713.t1 #PROT g6713.t1 g6713 MATPMEHIDRNRLNEDILYRFQYLQKFMEFGANEIRALKAASPFIIAVAPAIVELVYRKLFAFDITKEVFLRRNEGYSGDLANDLASLDMNNGQIQYRKEALTKYLAKLVTSDYDENFVKYVDWDLPLDPPTKKAVTRAFNKLFWIQADLFSRHYIPIGVDLSLAAKEAMANLRV* # ORIGINAL: g6710.t1 original gene structure, not modified by PASA NODE_655_length_19503_cov_43.3723 AUGUSTUS gene 4356 7012 . - . ID=g6710;Name=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS mRNA 4356 7012 . - . ID=g6710.t1;Parent=g6710;Name=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 6840 7012 . - . ID=g6710.t1.exon1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 6840 7012 . - 0 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 6646 6716 . - . ID=g6710.t1.exon2;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 6646 6716 . - 1 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 6242 6377 . - . ID=g6710.t1.exon3;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 6242 6377 . - 2 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 5933 5992 . - . ID=g6710.t1.exon4;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 5933 5992 . - 1 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 5445 5595 . - . ID=g6710.t1.exon5;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 5445 5595 . - 1 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 4698 4789 . - . ID=g6710.t1.exon6;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 4698 4789 . - 0 ID=cds.g6710.t1;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 4356 4503 . - . ID=g6710.t1.exon7;Parent=g6710.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 4356 4503 . - 1 ID=cds.g6710.t1;Parent=g6710.t1 #PROT g6710.t1 g6710 MSAGVALAVVDDDLPLSNRSSTILPSGDSTDTEWLTVMIILAVAYLLPASISVIALCRLWKRPVETTWQKIFHSFVIVGCIVRIIYWIFSITHETNGDDFDHRAMFFISMLPTFIFFSTYLILLFFWVEIYHAGFHQHTSKSAGINRFKPVFVFVNCFMYSFVIVLTSLDFALTESTSDQPTTENLSRYELILMYFSVSSITAIVLFFFFVRATFLILGAHGAIPHSWWLLFAYYMLTEVFALCLMLSLLQSEEKRRDSIPSETSGLLASSQVNPI* # ORIGINAL: g6712.t1 original gene structure, not modified by PASA NODE_655_length_19503_cov_43.3723 AUGUSTUS gene 10613 12504 . + . ID=g6712;Name=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS mRNA 10613 12504 . + . ID=g6712.t1;Parent=g6712;Name=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 10613 10732 . + . ID=g6712.t1.exon1;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 10613 10732 . + 0 ID=cds.g6712.t1;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 10896 10979 . + . ID=g6712.t1.exon2;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 10896 10979 . + 0 ID=cds.g6712.t1;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 11292 11462 . + . ID=g6712.t1.exon3;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 11292 11462 . + 0 ID=cds.g6712.t1;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 11974 12084 . + . ID=g6712.t1.exon4;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 11974 12084 . + 0 ID=cds.g6712.t1;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS exon 12349 12504 . + . ID=g6712.t1.exon5;Parent=g6712.t1 NODE_655_length_19503_cov_43.3723 AUGUSTUS CDS 12349 12504 . + 0 ID=cds.g6712.t1;Parent=g6712.t1 #PROT g6712.t1 g6712 MASSSIEHIDRDRLNDDVVYRFQYLQKFAEFGADEIKAIKAAGPYVVALAPTIVDLVYKKLFSFDITKEVFLRRNEGYTGDLAADLQSLDLNNGQIKFRKDMLTKYLAKLVTAEYDVNFIKYLDWVGKVHTPKSGSKNINVEMVHCNALFTYVSDIVLSAVLELPVDMQTKKNAARAFNKLFWIQADLFSRHYIPIGVDMSLAGKEKVAALNH* # PASA_UPDATE: g6711.t1, single gene model update, valid-1, status:[pasa:asmbl_8716,status:12], valid-1 NODE_655_length_19503_cov_43.3723 . gene 7737 9482 . + . ID=g6711;Name=g6711.t1 NODE_655_length_19503_cov_43.3723 . mRNA 7737 9482 . + . ID=g6711.t1;Parent=g6711;Name=g6711.t1 NODE_655_length_19503_cov_43.3723 . five_prime_UTR 7737 7743 . + . ID=g6711.t1.utr5p1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 7737 7789 . + . ID=g6711.t1.exon1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 7744 7789 . + 0 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 8003 8084 . + . ID=g6711.t1.exon2;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 8003 8084 . + 2 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 8217 8266 . + . ID=g6711.t1.exon3;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 8217 8266 . + 1 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 8567 8702 . + . ID=g6711.t1.exon4;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 8567 8702 . + 2 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 8864 8996 . + . ID=g6711.t1.exon5;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 8864 8996 . + 1 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . exon 9213 9482 . + . ID=g6711.t1.exon6;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . CDS 9213 9368 . + 0 ID=cds.g6711.t1;Parent=g6711.t1 NODE_655_length_19503_cov_43.3723 . three_prime_UTR 9369 9482 . + . ID=g6711.t1.utr3p1;Parent=g6711.t1 #PROT g6711.t1 g6711 MASTIVSRIRNFWFNGLHDGAGPTPVLMKLWFGKDAAVDAEMKIDYEVDIKEAAAGNYSELESTPEGLLTLIVLLDQFPRNIYRGTPQSFAFDPIARNYAVAAIEKGFDLQIPHQKRIFFYLPLEHSENVEDQRLCRTKTQELASTAPASLAGLLGSFVKYSQMHLDIIEKFGRFPHRNDILGRQSTPEEIAHVKEHGGF* # ORIGINAL: g3458.t1 original gene structure, not modified by PASA NODE_3155_length_4158_cov_42.2241 AUGUSTUS gene 2953 4070 . - . ID=g3458;Name=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS mRNA 2953 4070 . - . ID=g3458.t1;Parent=g3458;Name=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS exon 3961 4070 . - . ID=g3458.t1.exon1;Parent=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS CDS 3961 4070 . - 0 ID=cds.g3458.t1;Parent=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS exon 3480 3800 . - . ID=g3458.t1.exon2;Parent=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS CDS 3480 3800 . - 1 ID=cds.g3458.t1;Parent=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS exon 2953 3328 . - . ID=g3458.t1.exon3;Parent=g3458.t1 NODE_3155_length_4158_cov_42.2241 AUGUSTUS CDS 2953 3328 . - 1 ID=cds.g3458.t1;Parent=g3458.t1 #PROT g3458.t1 g3458 MGRTIEGGDGSGLWLVIVLPCGWAALVFGTVLHISTRYKVLIRDDEDMHAQRTSRLRDLLQTINDYSGVKVTPNKRNLKGSNRVESIDPSDGVVGAHGLTNDAHAMVDLVAATGEHTSSPVKPMTLLSIPKAHVEATPASLISKFAQQGILIASDEAFLLGLVAAENAAVMSLFTISRGDESLFLELIASMLIAMFAYKDYGAAALTSGSMRSALDCYRLSIARASISTLEAHNNSSSDGAVNENAWTVGGDGMPLGTMSLPCTVEEQ* # PASA_UPDATE: g3457.t1, single gene model update, valid-1, status:[pasa:asmbl_5641,status:12], valid-1 NODE_3155_length_4158_cov_42.2241 . gene 130 2108 . - . ID=g3457;Name=g3457.t1 NODE_3155_length_4158_cov_42.2241 . mRNA 130 2108 . - . ID=g3457.t1;Parent=g3457;Name=g3457.t1 NODE_3155_length_4158_cov_42.2241 . five_prime_UTR 1687 2108 . - . ID=g3457.t1.utr5p1;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . exon 1224 2108 . - . ID=g3457.t1.exon1;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . CDS 1224 1686 . - 0 ID=cds.g3457.t1;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . exon 643 822 . - . ID=g3457.t1.exon2;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . CDS 643 822 . - 2 ID=cds.g3457.t1;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . exon 130 450 . - . ID=g3457.t1.exon3;Parent=g3457.t1 NODE_3155_length_4158_cov_42.2241 . CDS 130 450 . - 2 ID=cds.g3457.t1;Parent=g3457.t1;3_prime_partial=true #PROT g3457.t1 g3457 MTTRGRVLARMTSPFSPTSPGDLDSFDFNQMDGGEYNRARTHTMQRRPSTLMSYHEIAQKLFSGPATGFEDFMTASENGDVVKIMSMLADSTVQIDVDAKDKTTGNTALITAAKSGKGQAVATLLRHNADVTLRNHALETAVNVAPDDIKSQLLETVERDQITAEDFMKAAWVGDFRAVNKYLSRQQFTDVNCKNKEGYSPLLLVTRDLQMFEDSMNLGKKYKPAEVVALLLRSKAEVNVHDLDGYTPLHYASAAKGKVARKIVTMLCKDHAQIDARNSFQNTPLHGASITGYASIVITLLENGADANSRGFNGTTPMHIV # PASA_UPDATE: g14252.t1, single gene model update, valid-1, status:[pasa:asmbl_9578,status:12], valid-1 NODE_829_length_17238_cov_37.7711 . gene 159 2792 . - . ID=g14252;Name=g14252.t1 NODE_829_length_17238_cov_37.7711 . mRNA 159 2792 . - . ID=g14252.t1;Parent=g14252;Name=g14252.t1 NODE_829_length_17238_cov_37.7711 . five_prime_UTR 2760 2792 . - . ID=g14252.t1.utr5p1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 2725 2792 . - . ID=g14252.t1.exon1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 2725 2759 . - 0 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 1920 2536 . - . ID=g14252.t1.exon2;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 1920 2536 . - 1 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 1470 1680 . - . ID=g14252.t1.exon3;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 1470 1680 . - 2 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 970 1106 . - . ID=g14252.t1.exon4;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 970 1106 . - 1 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 743 819 . - . ID=g14252.t1.exon5;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 743 819 . - 2 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 498 595 . - . ID=g14252.t1.exon6;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 498 595 . - 0 ID=cds.g14252.t1;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . exon 159 383 . - . ID=g14252.t1.exon7;Parent=g14252.t1 NODE_829_length_17238_cov_37.7711 . CDS 159 383 . - 1 ID=cds.g14252.t1;Parent=g14252.t1;3_prime_partial=true #PROT g14252.t1 g14252 MEDDDTRGLLASTGDGEDGGIKGAGGASSTGSQGCLCDPHRRHYRYLVLLLICFLSFGSYFCYDIPSSLEDEIKLDMGVSTAQYALLYSLYSWPNVILCFFGGYLIDRVFGLRWGAFIFGSFVLVGQIIVTIGAQTNQYWLMEVGRFVFGIGGESLAVAQNAYSVAWFKGKELNMVFGIQLSFSRVGSTVNMNVMKPLYDSIGVQPGYKSLGITLWMGTLMCVISQVCTGLAGWMDKRAVVAGVRKESSTDEKVNFRDVKNFSLSLWLLFLICVAYYAAVFPFIGLALTFFEEKYRMKASDAHAVNSIVYIVSAAASPVFGFCVDYFGRNVFWVTGATLVTLLCHMLMAFTFVNPWVPMIIFGFAYSVLACALWPMVSLIVPEHQLATAYGMMQSIQNLGMALISMAAGSIVDGSGYLFLEMFFCACVSIALMACAALYIVDKNSGGTLNLSQAQRAKAQAAAETP # PASA_UPDATE: g14255.t1, single gene model update, valid-1, status:[pasa:asmbl_9579,status:3], valid-1 NODE_829_length_17238_cov_37.7711 . gene 9417 11737 . - . ID=g14255;Name=g14255.t1 NODE_829_length_17238_cov_37.7711 . mRNA 9417 11737 . - . ID=g14255.t1;Parent=g14255;Name=g14255.t1 NODE_829_length_17238_cov_37.7711 . five_prime_UTR 11633 11737 . - . ID=g14255.t1.utr5p1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 11511 11737 . - . ID=g14255.t1.exon1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 11511 11632 . - 0 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 11239 11355 . - . ID=g14255.t1.exon2;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 11239 11355 . - 1 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 10998 11150 . - . ID=g14255.t1.exon3;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 10998 11150 . - 1 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 10804 10894 . - . ID=g14255.t1.exon4;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 10804 10894 . - 1 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 10525 10677 . - . ID=g14255.t1.exon5;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 10525 10677 . - 0 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 10149 10297 . - . ID=g14255.t1.exon6;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 10149 10297 . - 0 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . exon 9417 9947 . - . ID=g14255.t1.exon7;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . CDS 9665 9947 . - 1 ID=cds.g14255.t1;Parent=g14255.t1 NODE_829_length_17238_cov_37.7711 . three_prime_UTR 9417 9664 . - . ID=g14255.t1.utr3p1;Parent=g14255.t1 #PROT g14255.t1 g14255 MAMGQVAEPGVHGGATGLVLPVAMVFVGCCLNSMTLEMIVREDPGSGTLITVTQFAFVAFEGILLKSIRGVGVARTVPLKHYFGMVAIFFAVSVANNVALGFKISMPLHMIFRSGSLITNLILGVVVMGKRHSTIKFLSVALVTAGIILCTWISGKRDDVKPAEVVDADALAYVVGLSILSFSLVASSFLGLYQEYVYKKYGRNWREGMFYSHALALPCFVVFWSDIAQHAAIFSQSEPSTAAFSFGLPRLWIILVANVVTQYLCIRGVFTLTSLSSSLTVTLLITLRKFVSLVISIFYFRNPFTAQHWLGAILVFGGTLLFFDQIPSAIARTLRHLSSFQRKGAVSSPTKAKSQ* # ORIGINAL: g14253.t1 original gene structure, not modified by PASA NODE_829_length_17238_cov_37.7711 AUGUSTUS gene 3288 7280 . + . ID=g14253;Name=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS mRNA 3288 7280 . + . ID=g14253.t1;Parent=g14253;Name=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 3288 3407 . + . ID=g14253.t1.exon1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 3288 3407 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 3579 3712 . + . ID=g14253.t1.exon2;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 3579 3712 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 3866 3926 . + . ID=g14253.t1.exon3;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 3866 3926 . + 1 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 4123 4422 . + . ID=g14253.t1.exon4;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 4123 4422 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 4569 5201 . + . ID=g14253.t1.exon5;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 4569 5201 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 5387 6106 . + . ID=g14253.t1.exon6;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 5387 6106 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 6236 6463 . + . ID=g14253.t1.exon7;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 6236 6463 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 6848 7038 . + . ID=g14253.t1.exon8;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 6848 7038 . + 0 ID=cds.g14253.t1;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 7178 7280 . + . ID=g14253.t1.exon9;Parent=g14253.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 7178 7280 . + 1 ID=cds.g14253.t1;Parent=g14253.t1 #PROT g14253.t1 g14253 MQSLRRLSENAASFLSSLTSRGIGAGIGAMPPVSPGEEIEPIELCCQAIMTNNKRALQDLLAAHRIGVSESFGRANRTLLHMAAGFGSFDCIQVLIKNGADPNVQDGGGNTALHLAARNGNGRMLRALVECGSDVHIRSNDGLTPLHWLASNGHAPALLAVLGMGVPIDVRDVHGQTPLHLACQNGHRTAAISLLDHGADIDARQGRSSVFFACRYGQSNCVQLLVERRWSLLREVVASLVDGGVEERMATSVAVALAGDAAVGNELLAALSSDLVDASMQLLCSHTNADTLSQRMFREANVLASLLRRGGVRQRDGCSSGGVGDGGGRSIEQLPMMEPLWTTLDEWLRFMSAEGASAGLVLSVGQRVCMALNALDTVCRAASDDSNAPDTAAGRFATFVIEHEAPLRVIMKSDPKSIYRHFNFLLEHGSALVRFADIVQTIPFAERRAWFFEGLGRARESDLPFIDGSEATVVVGRDRPFEDSCAVVLGGDAIDRLKGVLSVQFRGEEGVGAGVRREWFDRLSREMLNADYGLFVPSADGAAFQPNPNSHVNPDHLSYFRFAGRIVGMALYHGQLLDVYFTRSFYKHMLGIPVSYADVAGIDTEYHKNLQWILDNCIDGMGLELTFSVEFDHFGRTEVVELKPGGSKITVTDANKHEYVQLAAEQKMTRAIGAQISCFVEGFRDFIPRTTVAIFNEYELELLISGMPSIDVDDWEANTQYSGFDAASPAVQWFWRTVRGFTNEDRVLLLQFVTGSSRVPIGGFASLVGAAGPTPFTVSRLEGQPGSTRLPSASTCFNLLKLPDYESEEQLRDRLAVALRFGCQGYAFA* # PASA_UPDATE: g14257.t1, single gene model update, valid-1, status:[pasa:asmbl_9580,status:3], valid-1 NODE_829_length_17238_cov_37.7711 . gene 14519 16855 . - . ID=g14257;Name=g14257.t1 NODE_829_length_17238_cov_37.7711 . mRNA 14519 16855 . - . ID=g14257.t1;Parent=g14257;Name=g14257.t1 NODE_829_length_17238_cov_37.7711 . five_prime_UTR 16797 16855 . - . ID=g14257.t1.utr5p1;Parent=g14257.t1 NODE_829_length_17238_cov_37.7711 . exon 16739 16855 . - . ID=g14257.t1.exon1;Parent=g14257.t1 NODE_829_length_17238_cov_37.7711 . CDS 16739 16796 . - 0 ID=cds.g14257.t1;Parent=g14257.t1 NODE_829_length_17238_cov_37.7711 . exon 14519 16575 . - . ID=g14257.t1.exon2;Parent=g14257.t1 NODE_829_length_17238_cov_37.7711 . CDS 15521 16575 . - 2 ID=cds.g14257.t1;Parent=g14257.t1 NODE_829_length_17238_cov_37.7711 . three_prime_UTR 14519 15520 . - . ID=g14257.t1.utr3p1;Parent=g14257.t1 #PROT g14257.t1 g14257 MSSRASTELQTTARALIVAVASSCNPKETTLGIVHALYTTIRTLISLDEGDDDPHTAEATDAHTGEGGPTSDSGFCSDYARAAFRDALPPLCESLGRIPDSARAKLTPDALDAIRGYLATLRPDEHDDGAMEQTPIREAEQQDQGRGRDTGHISEGFMGDVAADLTAVAAFLSPFVEDGGSGDANLRSLVLSVWSWPLGEVPLSLARRGGSAVAAVLRTWLSVTDAALCDVASSLEEASHRLPEGDHVTDDAVGMSHYALFCIRAGVRMPPLSAPPGDIVTCVALYAPFALCLLASPRVLTAAKGVELVAVLSRRLPLETVAGEGPCARAVFDGLMRFAVRCPSQSMRKACTQAAREFARLFVAASRLLS* # ORIGINAL: g14256.t1 original gene structure, not modified by PASA NODE_829_length_17238_cov_37.7711 AUGUSTUS gene 12182 14653 . + . ID=g14256;Name=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS mRNA 12182 14653 . + . ID=g14256.t1;Parent=g14256;Name=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 12182 12232 . + . ID=g14256.t1.exon1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 12182 12232 . + 0 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 12351 12472 . + . ID=g14256.t1.exon2;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 12351 12472 . + 0 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 12601 12691 . + . ID=g14256.t1.exon3;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 12601 12691 . + 1 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 12790 12923 . + . ID=g14256.t1.exon4;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 12790 12923 . + 0 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 13112 13288 . + . ID=g14256.t1.exon5;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 13112 13288 . + 1 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 13440 13932 . + . ID=g14256.t1.exon6;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 13440 13932 . + 1 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 14137 14232 . + . ID=g14256.t1.exon7;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 14137 14232 . + 0 ID=cds.g14256.t1;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 14438 14653 . + . ID=g14256.t1.exon8;Parent=g14256.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 14438 14653 . + 0 ID=cds.g14256.t1;Parent=g14256.t1 #PROT g14256.t1 g14256 MGRGDKVSFSEMGRGDKDSEPLLASDAEDNVTVARVHSVSDDDSDEEHVNIGRTRTTSTSATFINLLKSYIGSGLLGLPYAFRQSGIMAGVIIMVCVMIMSTHTMLILVKVKQLLAHKGIVSFSDIAHHVSGKWMSRSVDILLCFTQFGFATVYMVYISENLAHYFNDTMRVKGFILLGAFPVFLALAYIRTLKYVGPASLLANICIGFGAVVLITVSCYQLDHHVLPELAGNVEWYVNPSSLPIFFGMAVYTAEGIGLVLPSETAMRTPSKFPRVLVGVAVVSTIMYLLFGTVPYLAFGPDTKDSLIDNFATFAKSAPNSVSWQRLQTVTRFSLMVAILFTYPVQLFVVTDIVEEEMFKSGRLSTKNKNLKIYGFRTFLVVLGSIVALTVPKFGLLISLIGSAGGSALQFVFPCLFYLNLEPAMSIRMRLLMYFYIFVGVAGGGLGTAYTLKKLIEGE* # ORIGINAL: g14254.t1 original gene structure, not modified by PASA NODE_829_length_17238_cov_37.7711 AUGUSTUS gene 7986 8633 . - . ID=g14254;Name=g14254.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS mRNA 7986 8633 . - . ID=g14254.t1;Parent=g14254;Name=g14254.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS exon 7986 8633 . - . ID=g14254.t1.exon1;Parent=g14254.t1 NODE_829_length_17238_cov_37.7711 AUGUSTUS CDS 7986 8633 . - 0 ID=cds.g14254.t1;Parent=g14254.t1 #PROT g14254.t1 g14254 MASEEDWYGLLGLSPDCADKEIAKAYRTKARESHPDKVADKDASAKETAARKFHLIGRAYEVLSDPAKKEAYDKTLRSRAAVKKRDNALDDGRRKMKADLEEAEQRAAKRPKTYGHAHGHGHGAHNSADAERRLREENLRRLEQLREAESQQQQLRKATSASSTASVRTDAGGQVAGSASSLDDYERQVLENLRRAQERKKAAEEAKKEAVAESG* # PASA_UPDATE: g5423.t1, single gene model update, valid-1, status:[pasa:asmbl_4966,status:12],[pasa:asmbl_4967,status:12], valid-1 NODE_2769_length_5170_cov_83.5629 . gene 170 4686 . - . ID=g5423;Name=g5423.t1 NODE_2769_length_5170_cov_83.5629 . mRNA 170 4686 . - . ID=g5423.t1;Parent=g5423;Name=g5423.t1 NODE_2769_length_5170_cov_83.5629 . five_prime_UTR 4653 4686 . - . ID=g5423.t1.utr5p1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 4503 4686 . - . ID=g5423.t1.exon1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 4503 4652 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 4228 4311 . - . ID=g5423.t1.exon2;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 4228 4311 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 3924 4113 . - . ID=g5423.t1.exon3;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 3924 4113 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 3563 3675 . - . ID=g5423.t1.exon4;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 3563 3675 . - 2 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 3102 3254 . - . ID=g5423.t1.exon5;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 3102 3254 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 2633 2845 . - . ID=g5423.t1.exon6;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 2633 2845 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 2164 2380 . - . ID=g5423.t1.exon7;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 2164 2380 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 1849 1995 . - . ID=g5423.t1.exon8;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 1849 1995 . - 2 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 1500 1602 . - . ID=g5423.t1.exon9;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 1500 1602 . - 2 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 1199 1262 . - . ID=g5423.t1.exon10;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 1199 1262 . - 1 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 615 713 . - . ID=g5423.t1.exon11;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 615 713 . - 0 ID=cds.g5423.t1;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . exon 170 304 . - . ID=g5423.t1.exon12;Parent=g5423.t1 NODE_2769_length_5170_cov_83.5629 . CDS 170 304 . - 0 ID=cds.g5423.t1;Parent=g5423.t1;3_prime_partial=true #PROT g5423.t1 g5423 MAVPSQPLKKPPRDGESPAKDEDEASHSGNVYIASQSHVWKLSLVPLPAQIEQLLKDKRFEEALILVKLLKNVDPTEKENNIKHIRTLLGYHYFAQHRFEHAMDIFADLDVDPAVVIGLFPGMFSRELQMKLQYPIDVPKLEDADRDKAMVALTTFLTNKRRVESAKAKNLGKDAVTGDDEFQRKELMQLIDTTLLKCYLQTNETLVGSLLRVENYCHVAEAEKRLREKDKMPELVLLYQGKGLHRKALELLFKSGQKATGPLGGTAPTIRYLQKLGVDNWKLITEYAEWVLLASPTDGLRIFTEDCAEVDTLNHRDVVNLLKEKCPQTVLPYLEHVIDQKGDKDGDLHNMRVDLLLTDVLRLLPGAPDVAKQGNSTPTTARRVRPGEEGGAFGAARKRLITFLEGSKFYDAERLLHRFPNEALFEERAILHERRRAHDKALALYVHRLGDYEAAERYCVRQYKESPTNTDVFFVLLQVYLKPAAGVSPVPLVKPAIEILRRHSSKVDPIQALDLLPIDTQISELYEFLESVLCSRSERRRKDQIVKNLHKAENLR # ORIGINAL: g7966.t1 original gene structure, not modified by PASA NODE_1767_length_9320_cov_72.4018 AUGUSTUS gene 3248 6603 . + . ID=g7966;Name=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS mRNA 3248 6603 . + . ID=g7966.t1;Parent=g7966;Name=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 3248 3389 . + . ID=g7966.t1.exon1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 3248 3389 . + 0 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 3607 3643 . + . ID=g7966.t1.exon2;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 3607 3643 . + 2 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 3955 4072 . + . ID=g7966.t1.exon3;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 3955 4072 . + 1 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 4332 4471 . + . ID=g7966.t1.exon4;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 4332 4471 . + 0 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 4612 4792 . + . ID=g7966.t1.exon5;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 4612 4792 . + 1 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 4972 5091 . + . ID=g7966.t1.exon6;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 4972 5091 . + 0 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 5250 5364 . + . ID=g7966.t1.exon7;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 5250 5364 . + 0 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 5576 5783 . + . ID=g7966.t1.exon8;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 5576 5783 . + 2 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 5939 6006 . + . ID=g7966.t1.exon9;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 5939 6006 . + 1 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 6162 6273 . + . ID=g7966.t1.exon10;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 6162 6273 . + 2 ID=cds.g7966.t1;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 6528 6603 . + . ID=g7966.t1.exon11;Parent=g7966.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 6528 6603 . + 1 ID=cds.g7966.t1;Parent=g7966.t1 #PROT g7966.t1 g7966 MSMVCTEVVMTLLSQLFDDLSVEQRHRMAAAVEARLSRLADFADGKGASEFVCVTEGYLSCGVKVSSAKGRAQHCERVFLGGLHPLLPDFAAACEPSEMLRLIPILSRYACRSTDAAASRSATDALQRVLSVLGEAFEDLSPDATAMLWPYSQFIAATVSPPPQHALTKRIELTLFIRSAGGISKRDLEAACDVCLGAVLQALGSKDTEHVTVRRLVDVIGTVFSVLGDSRRLPDVFSSIAGRMMEENISAWRTKTDNTAQQFRILSNEIPAEEIQDEASESDSDSEHETGESLALNLSNGHRSTGSVDSDSSDWDSWDDEGQQTAELLLPAFAQLLHELRAMFPSGEGRLSRRSSMHAGVPSRAEFAMRKISNGEDPFLGVSPGSLRRANLTTCSYDQRLNDVPPSDKKIVMWITERCPPGSSDAGAALRNLRTLLE* # ORIGINAL: g7965.t1 original gene structure, not modified by PASA NODE_1767_length_9320_cov_72.4018 AUGUSTUS gene 37 2863 . + . ID=g7965;Name=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS mRNA 37 2863 . + . ID=g7965.t1;Parent=g7965;Name=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 37 340 . + . ID=g7965.t1.exon1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 37 340 . + 0 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 463 708 . + . ID=g7965.t1.exon2;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 463 708 . + 2 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 824 954 . + . ID=g7965.t1.exon3;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 824 954 . + 2 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 1251 2057 . + . ID=g7965.t1.exon4;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 1251 2057 . + 0 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 2251 2361 . + . ID=g7965.t1.exon5;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 2251 2361 . + 0 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 2489 2584 . + . ID=g7965.t1.exon6;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 2489 2584 . + 0 ID=cds.g7965.t1;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 2777 2863 . + . ID=g7965.t1.exon7;Parent=g7965.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 2777 2863 . + 0 ID=cds.g7965.t1;Parent=g7965.t1 #PROT g7965.t1 g7965 EALTSLKEVVGRLAPHGLSFSPSGVTGDGTDNIHPALAAPFQFMDAYEAEGLLSVCVYLIKHIPPRFLLPNWPHYFRTFDVYLMHPASTVRQVTSTLFKHLVAKDCHNPALLKLIVQSLAADWETNTRLLSLNTDDDMCEASECAKSDPAMVVESTPAAPGSKASTVHHRIGVVDLLARATGSEPLHPSFSWEWREGRLFAYELLLKLIVANHIQYVFPSLDAVRRPQSAVPSSPSTATQLPLDVLEYIRESDEATDMQTPIRNNATVPGRGRLNTHSMGNAPFNVDAMSLSHSSSLMVDVTAPSPGGSMFNSPMLSRRTSALPHDSPVPHADTRLKQELLLTGGSPDYESVPVPGAGLLRIAHLSKSETNVAAVGIGIGIGSAPLRSVSPSKVPSASPSLISQLHNLDGGALWGAASQSVPSVADLVESGRVSLSLIGDRDAAANHPPPAQQGLLFSWLSDVHLEHFGLTVRALVLHVAECVGDARWELRRMADQVLPVLAEAVCWYDVAILGELWRTLIPLRCSVLSYVAVIMLRHAAVQRAKLVHLASHSRPAWLDAVQCRRAATKLSNVLVDGLSVWLEDISTHTNFTA* # ORIGINAL: g7967.t1 original gene structure, not modified by PASA NODE_1767_length_9320_cov_72.4018 AUGUSTUS gene 6946 9255 . + . ID=g7967;Name=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS mRNA 6946 9255 . + . ID=g7967.t1;Parent=g7967;Name=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 6946 6987 . + . ID=g7967.t1.exon1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 6946 6987 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 7124 7216 . + . ID=g7967.t1.exon2;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 7124 7216 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 7372 7470 . + . ID=g7967.t1.exon3;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 7372 7470 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 7666 7719 . + . ID=g7967.t1.exon4;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 7666 7719 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 8112 8150 . + . ID=g7967.t1.exon5;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 8112 8150 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 8641 8766 . + . ID=g7967.t1.exon6;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 8641 8766 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS exon 9082 9255 . + . ID=g7967.t1.exon7;Parent=g7967.t1 NODE_1767_length_9320_cov_72.4018 AUGUSTUS CDS 9082 9255 . + 0 ID=cds.g7967.t1;Parent=g7967.t1 #PROT g7967.t1 g7967 MGKRERGGGSGSDEDGEVRRSTANAKRRRLIDDDGDDAPKRPVVESVSETRDEPQLKRRRGGLEQYDEDLYGRAEDVTDTKADKHTDSAAIKSDGQRGVDAPRNKDDFGQHKKKEGKRNRKEAEDSEEDDDEHDDKEEEFYDEGEEDDYAKPKKRSKSKAAAAKKPAGTCVDVDLDDDEEGGLQRAIDSAVAADVHKGGPEPYVPECV* # ORIGINAL: g6773.t1 original gene structure, not modified by PASA NODE_3597_length_3134_cov_43.6558 AUGUSTUS gene 43 2550 . + . ID=g6773;Name=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS mRNA 43 2550 . + . ID=g6773.t1;Parent=g6773;Name=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 43 432 . + . ID=g6773.t1.exon1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 43 432 . + 1 ID=cds.g6773.t1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 755 910 . + . ID=g6773.t1.exon2;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 755 910 . + 1 ID=cds.g6773.t1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 1127 1254 . + . ID=g6773.t1.exon3;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 1127 1254 . + 1 ID=cds.g6773.t1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 1808 1959 . + . ID=g6773.t1.exon4;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 1808 1959 . + 2 ID=cds.g6773.t1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 2234 2363 . + . ID=g6773.t1.exon5;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 2234 2363 . + 0 ID=cds.g6773.t1;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS exon 2531 2550 . + . ID=g6773.t1.exon6;Parent=g6773.t1 NODE_3597_length_3134_cov_43.6558 AUGUSTUS CDS 2531 2550 . + 2 ID=cds.g6773.t1;Parent=g6773.t1 #PROT g6773.t1 g6773 FGTLAGTIHDTPRGMGLGLTTVLAHDLGAGTMGYLTWKFGMDSSMNTTIIRNTDTYNVSGVIQVGMPRSFLGATYIRRLADSKSRVRVAGRLGTTGLSLEYGGDRNVGDQTKLGVNVVVGYPAGVSVKFRITRAGQNYIFPVLLSQVPSIKAAFYGTIVPGVVAWAAYKFIVVPYRRSQNQEKVDKLRKESADSIQARKAEAEAAVRLMREAVQRKVVGEQERNGLIIVQAWYGKLASSEGESGVEGVADAVIDVAIPLQCLVKDSQLHLPAQSKASIVGFYDPCVGEDKNLRIKYQFKGKMHLVTVSDTDAVALPKRSHMVAS* # ORIGINAL: g1194.t1 original gene structure, not modified by PASA NODE_1765_length_9325_cov_43.0693 AUGUSTUS gene 85 4401 . - . ID=g1194;Name=g1194.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS mRNA 85 4401 . - . ID=g1194.t1;Parent=g1194;Name=g1194.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS exon 1149 4401 . - . ID=g1194.t1.exon1;Parent=g1194.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS CDS 1149 4401 . - 0 ID=cds.g1194.t1;Parent=g1194.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS exon 85 909 . - . ID=g1194.t1.exon2;Parent=g1194.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS CDS 85 909 . - 2 ID=cds.g1194.t1;Parent=g1194.t1 #PROT g1194.t1 g1194 MDVGFYAFRKGPRIQNDAFHGEHAGYSADLAGDLVTCMSERIMRHLQGAAAAEGAQLAGDSAGSKWLFEVARDMRGLILHTTMERAAVHAVSVAVTRPLLALVVALERNRSLDSYISGAMPHVARESWRAAFVAGHVLPIPKVDEIERGIAEQRLPFYPRAVPQVLPYSVAVDNVAETSLELATSLDDDDSALSALRSCVDEACITFHLAGFSEGFPGVVGDGVMALRDAYLTDFALSHAPDGASAPVYRQVVRTWSTSDMAPPHPAALHFALHRHGDKMAAQTRLIDAVIKAKVRNAEWAVGSESRSRLVEGLLDASNPEDGEETPLWIVFNARLLKWACTSILGILAFMRPGDGRTERDLVDWERHAGHVLSLVRGDLARITRLPAAVYGLRACLEICALANKVPALEAVEAPLLANAMVGENDDGEGDVLCSTSAFKRALNAVYALLTDGGNAVGMDEEELHEDQDQDVSEDEEDAMEVDGGASQDGSDMSRNTDNGNDNDNNNNNNNNNNNNAGRLSASAVRSAAASCLVAMLWNWLEASEGDSSVVSSVLTYAFADAFLLERPPLVKPLVMLVAIKAREILALDGGLILGRDARLRDLARTHAGGRVEYDSPGEMMACALEAALRRASTAADSKIDTAAFCLVVDVLPDCVWPHDHFESAFAANTDEGAGAEGDTPGQQYEALLSEACAIVRRAHTAVADGTLSYLRAACAVAYIKTLWRAVAWHVFSNLANRQEQNARQGRLVSVLSACFRRTSQEEAREKTPPPKRRRIEDNSEGTPNVPDALEPARVYMLKELRAADVSLRRLSEEVNGDGVLAKALPWTEKMLATCRRNSPFAPCPFSDRTDGTGFFAVDKLVRGDKSAITRLMKNAAAPGPDSEVSRADLMRALCARFLFVRAGRTLTDAEERSWRWLRSQADTLLKGVASGYCELFKAIVANEWFSGNASLFFVSCEVETSRLYACAAALDIAITVASLDEETGTPLRAYFSKPSTSVEDFILGAEGSDIAALAANPIMTRWQCECGYMFVLEGREEGGAARFTGVCPGVGTTQCGLPIGKNGNPNQQRLDVQQNRRVVEDSRGFLLPLAEDVLRSPSCNARGLSRALFRAVTHAVLSCLAVGVECKASAKPHAVELSGLTGVDGQPLTISMVCDALEFNADAIASSHACSRDDVAMALHRMCELFRSALYANNNPTVAILRSERLYSSASMDAWERTFGDAVACPVFHNVHGAIRAFRLSPARAATVDEFGALEKEVEEAFPMGEYPPYPALHAAFRFVGQCSADSIGVRTNAVVRPFLALVFDTIELQSPAIMRYLPPLLAWAGDVRREKGVVSTRKELRDMTIARSSRRCVAQSQ # ORIGINAL: g1195.t1 original gene structure, not modified by PASA NODE_1765_length_9325_cov_43.0693 AUGUSTUS gene 4855 5244 . - . ID=g1195;Name=g1195.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS mRNA 4855 5244 . - . ID=g1195.t1;Parent=g1195;Name=g1195.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS exon 4855 5244 . - . ID=g1195.t1.exon1;Parent=g1195.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS CDS 4855 5244 . - 0 ID=cds.g1195.t1;Parent=g1195.t1 #PROT g1195.t1 g1195 MPDSVAVASAASANLPREQNAASAPALPAGGPSNEIDLTIDLNWDALGGIEDDVLQVRGIPQTHAAETHAPVNSYQWPHSAYGGETGTGGGPAYPPRYGSTSYYGTSQAASTITNSPFVPPRYTMEFYL* # ORIGINAL: g1196.t1 original gene structure, not modified by PASA NODE_1765_length_9325_cov_43.0693 AUGUSTUS gene 7302 8707 . - . ID=g1196;Name=g1196.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS mRNA 7302 8707 . - . ID=g1196.t1;Parent=g1196;Name=g1196.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS exon 8079 8707 . - . ID=g1196.t1.exon1;Parent=g1196.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS CDS 8079 8707 . - 0 ID=cds.g1196.t1;Parent=g1196.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS exon 7302 7584 . - . ID=g1196.t1.exon2;Parent=g1196.t1 NODE_1765_length_9325_cov_43.0693 AUGUSTUS CDS 7302 7584 . - 1 ID=cds.g1196.t1;Parent=g1196.t1 #PROT g1196.t1 g1196 MSVLDPLYGGPRARRFNRYQADVLASHYAGDPNPTADKVSDIAHKTGLSAKQIRKYYRNRRARGASCPSPGAAVTPIPTTAAGVTAEATAHHANATHTVQPGDSGIPAESVVAIPASTLHSGSISIAHAQERPASVTRTKQASRRAKEACRTIHESISEMGTAHERRSLLGKLVRGLTSADRQLLKESLRQKPKMGSADPTIKASTVKESAATATAMHSEARGYEHTAASEVDMVAGITAMLARHPAVAVQTMRRLGMEDMGSESVRCGAETGRRAVTRKRRRGESASRDEPISRVGDGPEEQ* # ORIGINAL: g11588.t1 original gene structure, not modified by PASA NODE_3264_length_3884_cov_41.9942 AUGUSTUS gene 108 3872 . + . ID=g11588;Name=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS mRNA 108 3872 . + . ID=g11588.t1;Parent=g11588;Name=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS exon 108 2858 . + . ID=g11588.t1.exon1;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS CDS 108 2858 . + 0 ID=cds.g11588.t1;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS exon 3085 3213 . + . ID=g11588.t1.exon2;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS CDS 3085 3213 . + 0 ID=cds.g11588.t1;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS exon 3414 3525 . + . ID=g11588.t1.exon3;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS CDS 3414 3525 . + 0 ID=cds.g11588.t1;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS exon 3616 3722 . + . ID=g11588.t1.exon4;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS CDS 3616 3722 . + 2 ID=cds.g11588.t1;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS exon 3852 3872 . + . ID=g11588.t1.exon5;Parent=g11588.t1 NODE_3264_length_3884_cov_41.9942 AUGUSTUS CDS 3852 3872 . + 0 ID=cds.g11588.t1;Parent=g11588.t1 #PROT g11588.t1 g11588 MLLLNRQPTLHKPSMMAHKARVLPGEKTIRLHYANCDTYNADFDGDEMNVHFPQNEIARAEANMIANTDNQYLVPTDGEPLRGLIQDHVVAGARMSKRDTFIDRQRYHQLVYAALPETGRRVILLTPCIIRPRPLWTGKQVISTVLLNLTRGFKPLNLVGKSKIPAKMWGPNSEEGTVIFQSGEMLCGILDKAQFGASAFGLVHSCQELYGGETAGRLLTALGRLFTAYLQFDAFTLGMEDIMLLPSADARRRGLMNSAIAIGAQEVARYVGQKDEKDAETLAANLERVYRSDAETAGLDAVMKTRLNKLTSEVIATCLPDGQLRPFPRNNLALMITSGAKGSMVNFSQISCLLGQQELEGRRVPVMVSGKTLPSFTAFDPSARAGGYVMGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGLRVHYDLSVRDDDGSVIQFNYGEDSLEPMRIKFLDRFSFVAQNYDGYIQKLDPASALRVLDSEKAIKRNARAVRNPAKHDPVISNLPPDRYLGSVSETFTQQLEEYVAKDPEGLLARLSKSRNLPLDNTADKFRALMWLKYRSTLAQPGEAVGVVAGQSIGEPSTQMTLNTFHFAGFGAMNVTLGIPRLREVLMTASTKIKTPVMRLPMLPGYEDKAEKLRRTLTRLSIADILQSVEVNETLTPKDADTRERTRLYTIRLETIARTTYEAEHGVSSGELYGTLETTFIRKLVSALLRALHAKGAKAMTENIGKGTREKQSKDGGAGEDDEDGADGERAPTKAKKDEDGDDDDDEDNEGADGDDAGAARSKANRKELATYDADDDGKDSDSDSDKSDDRVSVAASGDGADSDDEEAGAPGKAGAAAHKKAPTPKKSAKGKKGNAGAAEEARRERIRGVLSVSTHVHAYDYDENGEWCTLTLKFPAASRKLLLVAIIEQVSRIVLLRSTRGIQRCIIADDVEKSGKVTLQTEGVNLTEMWKYFDIIDVNKIATNDIYAILVTYGVEAARQAITGEVASVFQAYGISVDRRHLMLIADYMLIAAIN* # ORIGINAL: g13283.t1 original gene structure, not modified by PASA NODE_3596_length_3138_cov_32.0206 AUGUSTUS gene 44 2106 . + . ID=g13283;Name=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS mRNA 44 2106 . + . ID=g13283.t1;Parent=g13283;Name=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS exon 44 181 . + . ID=g13283.t1.exon1;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS CDS 44 181 . + 0 ID=cds.g13283.t1;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS exon 605 749 . + . ID=g13283.t1.exon2;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS CDS 605 749 . + 0 ID=cds.g13283.t1;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS exon 1020 1535 . + . ID=g13283.t1.exon3;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS CDS 1020 1535 . + 2 ID=cds.g13283.t1;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS exon 1898 2106 . + . ID=g13283.t1.exon4;Parent=g13283.t1 NODE_3596_length_3138_cov_32.0206 AUGUSTUS CDS 1898 2106 . + 2 ID=cds.g13283.t1;Parent=g13283.t1 #PROT g13283.t1 g13283 GSVFHPYINIQHVDMLRSPETSACFVGCSNPMFGHLARQFCDVFIDADRGSIDVRDPRLKEALILTLPDLRFIDRIVKATQTRPVENFGNDIAHVESEGDRWEGSELWVRRQFEQYTFSLLSTALAQQVSPPAVTSETVRTSSDGDEALTRADDAPARSLPDPARLSSAPFDDDFDEEHDFSKKSLEFLPDAAAVVTESIIGGAGTAIVVNPSPSSNPSLSQPIDVQPTGGRQSVDESANVSGASRALSPGTFSPFALLSNWGRGRAESARSPTASPRTSLDGRDPPAPSATTTNEAITDFNRAFIDMWTATPAYFEWRKSVRIDADLIALLDTV* # PASA_UPDATE: g13284.t1, single gene model update, valid-1, status:[pasa:asmbl_6263,status:12], valid-1 NODE_3596_length_3138_cov_32.0206 . gene 2389 3036 . + . ID=g13284;Name=g13284.t1 NODE_3596_length_3138_cov_32.0206 . mRNA 2389 3036 . + . ID=g13284.t1;Parent=g13284;Name=g13284.t1 NODE_3596_length_3138_cov_32.0206 . five_prime_UTR 2389 2440 . + . ID=g13284.t1.utr5p1;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . exon 2389 2448 . + . ID=g13284.t1.exon1;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . CDS 2441 2448 . + 0 ID=cds.g13284.t1;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . exon 2612 2700 . + . ID=g13284.t1.exon2;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . CDS 2612 2700 . + 1 ID=cds.g13284.t1;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . exon 2888 3036 . + . ID=g13284.t1.exon3;Parent=g13284.t1 NODE_3596_length_3138_cov_32.0206 . CDS 2888 3036 . + 2 ID=cds.g13284.t1;Parent=g13284.t1 #PROT g13284.t1 g13284 MVSQILEWSDDGTFDTFADDVRGGGEKMVQSVSGAFGNVRTKFDTVLAPKAEIAGRAIQEKGRAIGQSVSGAVGGAVAGFK* # PASA_UPDATE: g8342.t1, single gene model update, valid-1, status:[pasa:asmbl_2751,status:12], valid-1 NODE_1830_length_9010_cov_39.7492 . gene 77 1827 . + . ID=g8342;Name=g8342.t1 NODE_1830_length_9010_cov_39.7492 . mRNA 77 1827 . + . ID=g8342.t1;Parent=g8342;Name=g8342.t1 NODE_1830_length_9010_cov_39.7492 . five_prime_UTR 77 77 . + . ID=g8342.t1.utr5p1;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . exon 77 698 . + . ID=g8342.t1.exon1;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . CDS 78 698 . + 0 ID=cds.g8342.t1;Parent=g8342.t1;5_prime_partial=true NODE_1830_length_9010_cov_39.7492 . exon 1067 1267 . + . ID=g8342.t1.exon2;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . CDS 1067 1267 . + 0 ID=cds.g8342.t1;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . exon 1552 1827 . + . ID=g8342.t1.exon3;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . CDS 1552 1719 . + 0 ID=cds.g8342.t1;Parent=g8342.t1 NODE_1830_length_9010_cov_39.7492 . three_prime_UTR 1720 1827 . + . ID=g8342.t1.utr3p1;Parent=g8342.t1 #PROT g8342.t1 g8342 IAPSLVDPISHIRARDLLNRLPASGVSRDPMAPVLNIRGKLFRKGCRTLVMGILNATPDSFSESSANTLPGVHAEERQDVLQSAEALADRAIAMSGQGADIIDIGGQSTRPNAPEVGAQVEMDRVLPVIRLLRQRNSHIPISVDTFHASVASAAVEAGADMVNDVSAGLRDPAMFDTVARLNVPIVLMHSRGDSRTMMKMKDYPEGVVTAVSSFMRERVAMAISSGVRRWNIVLDPGVGFAKTAPQSVCLLRELRTCFCDDLAGHFVLVGPSRKGFVGDITGEKNPQRRDWGTAGACAGAIANGADIVRVHAVAEMTDAVKMCDAIVRK* # ORIGINAL: g8343.t1 original gene structure, not modified by PASA NODE_1830_length_9010_cov_39.7492 AUGUSTUS gene 2315 7368 . - . ID=g8343;Name=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS mRNA 2315 7368 . - . ID=g8343.t1;Parent=g8343;Name=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS exon 7002 7368 . - . ID=g8343.t1.exon1;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS CDS 7002 7368 . - 0 ID=cds.g8343.t1;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS exon 6259 6426 . - . ID=g8343.t1.exon2;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS CDS 6259 6426 . - 2 ID=cds.g8343.t1;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS exon 5350 5890 . - . ID=g8343.t1.exon3;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS CDS 5350 5890 . - 2 ID=cds.g8343.t1;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS exon 5061 5192 . - . ID=g8343.t1.exon4;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS CDS 5061 5192 . - 1 ID=cds.g8343.t1;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS exon 2315 4940 . - . ID=g8343.t1.exon5;Parent=g8343.t1 NODE_1830_length_9010_cov_39.7492 AUGUSTUS CDS 2315 4940 . - 1 ID=cds.g8343.t1;Parent=g8343.t1 #PROT g8343.t1 g8343 MIPLGTPAAGLALPSAGQTAHAKAVQHAARVLLFGHIGSALQPASDLPLHKQLRLQLAGDPSLPASCDSRAVTCGINNGTSPTRRALPTSVVVESGDCSFKDTLTLDELSVSPAILHMIKSMVNNDNDSEDRRNAEVDALCALNPHSESVLELMCAAVYLELPTLVERCAEFVGANFAGLSSFGDLPPDLITLILEHASPFDVLRAETSLSSELRCVDTRSVWKAIHCGKKGRYISLPDRVAAEAAAKARARSARSRSGSSRERRSRGPSARERSAMVGSTPGAISGASAVTVMAARAGKHAHGTIVKAAESRCGASGGGHVGVGSGASSAGVRRASARLAERKAREDASRVRMECLKRHLEDSLSRFVPLTEDPADLCALASTIGPLVEGHFRLRNSRLDARVLGHVVGCLLRATTIDISDNSIGVEKGVAVAKSLRRTNANITDVDLSHCGLGADGMGAIYTAIVHATLKEKEREKERDKGPTVSSSGERVADVRGSRQRALARVSDDLSGDVSSDRNSFDSDDGVKNAEVRGLQAPTRGHEDAPVSGAEPSLSNRCLELRIANLADNLTLRSRKGNSASASLGLRINNRPLDPSLLTRRQGNPGTFSWDALRMRPNGLASLEDSASGSNNNNSNKINSNNHDDAAPSATHGLRLPRLLSKRARMTVERTNNAIIGGDLAQASSQVADTHAHVRTYSDPTDAEESVERSASPIVSRSESYRRASDPPSLTVDAVVGSLRVGKASASASAVELNRDLRVSSSSRGSQGSANGIAHASGGSVSPPPPSQRNPKVVRQSQQGDGARDVKLVLSHNTLGGSLNALAECVAYGGRLRRLSVAHNSLGEQGASVVAELIRHPDCSLEWLDVSSTALGGSGVCVVAQAMTVNCSIERVDISGNIPHGQGKEAGKAVGRMLALNEHAEHIAVGKNSFDAAGLAAIADALQQNATLESIDLSATDMLPGDALNLAVRLRRNNTLAHLSVSRNRLPPKAVVDIVAVLSYCPSIRSLDISHNAAGMEVAQAIAAVLAHPRCKLESLLFNNSARSDPDLPTLGNDGTAVIAKGLSSNSSLRKLHLSGQAVRNNGCVALAKAWASSGLTELVLRDNRIGERGCVALAEAMAEVLDGRRGGRDERATSASMASRDIRGVIVLALEGNKTLTTRGRHALVEMASEGGDDVAVALPADGDQHVTTLSSSSFGLTLSLSAGVQQQQQQQQQQQQQQQQQQHQQLALSGNPSLAVPSRAPQRSVDSSFRLPGGQHYSAGGLADVLTAVCVRRN* # PASA_UPDATE: g8344.t1, single gene model update, valid-1, status:[pasa:asmbl_2752,status:12], valid-1 NODE_1830_length_9010_cov_39.7492 . gene 7996 8935 . + . ID=g8344;Name=g8344.t1 NODE_1830_length_9010_cov_39.7492 . mRNA 7996 8935 . + . ID=g8344.t1;Parent=g8344;Name=g8344.t1 NODE_1830_length_9010_cov_39.7492 . five_prime_UTR 7996 8017 . + . ID=g8344.t1.utr5p1;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . exon 7996 8044 . + . ID=g8344.t1.exon1;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . CDS 8018 8044 . + 0 ID=cds.g8344.t1;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . exon 8165 8219 . + . ID=g8344.t1.exon2;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . CDS 8165 8219 . + 0 ID=cds.g8344.t1;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . exon 8394 8576 . + . ID=g8344.t1.exon3;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . CDS 8394 8576 . + 2 ID=cds.g8344.t1;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . exon 8798 8935 . + . ID=g8344.t1.exon4;Parent=g8344.t1 NODE_1830_length_9010_cov_39.7492 . CDS 8798 8935 . + 2 ID=cds.g8344.t1;Parent=g8344.t1;3_prime_partial=true #PROT g8344.t1 g8344 MCEIVRMRLVIVFAACLFTAASVCAEETYYGHALRAGYSFSSAKAAQFVTAITLADGTVSPIVAGYTEDAFSFSTGSRSANASTHVGNGWVPQAFVARGNLTVDEMSSWTWAASPIVGNATAIGLAASRKPGGG # ORIGINAL: g4293.t1 original gene structure, not modified by PASA NODE_3978_length_2413_cov_39.4555 AUGUSTUS gene 214 1592 . - . ID=g4293;Name=g4293.t1 NODE_3978_length_2413_cov_39.4555 AUGUSTUS mRNA 214 1592 . - . ID=g4293.t1;Parent=g4293;Name=g4293.t1 NODE_3978_length_2413_cov_39.4555 AUGUSTUS exon 1035 1592 . - . ID=g4293.t1.exon1;Parent=g4293.t1 NODE_3978_length_2413_cov_39.4555 AUGUSTUS CDS 1035 1592 . - 0 ID=cds.g4293.t1;Parent=g4293.t1 NODE_3978_length_2413_cov_39.4555 AUGUSTUS exon 214 633 . - . ID=g4293.t1.exon2;Parent=g4293.t1 NODE_3978_length_2413_cov_39.4555 AUGUSTUS CDS 214 633 . - 0 ID=cds.g4293.t1;Parent=g4293.t1 #PROT g4293.t1 g4293 MMEAMREFQAAAAWHKQAKTVQQRAEATAVKQIIDEDLGRRESRVDAQVKHDAMASMLSTAELLSKKGVGVTKEREATPDVLDVVARSSTETLEAIGSILENKEREVKTKARVAHAKEVARIRRDLEGAASGSESAKSLGSKGLLLAIGGMATMILVAEYFGRNGEIEKNVSKVEARLLALRREVLVYRSLFGVDPRDRGTVLADTAHDTFAANLLGMTASELDHLSRNNAAPTEATRAARNKKNIPPHADKIIEKAKLRVGPKGLPAKIECDLAELIAETTVDARNAFRRQSDILKSEGLGVLDPSDIALLVEKDKLQSPAAAQ* # ORIGINAL: g2395.t1 original gene structure, not modified by PASA NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS gene 80 3744 . - . ID=g2395;Name=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS mRNA 80 3744 . - . ID=g2395.t1;Parent=g2395;Name=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS exon 2432 3744 . - . ID=g2395.t1.exon1;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS CDS 2432 3744 . - 2 ID=cds.g2395.t1;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS exon 1884 1972 . - . ID=g2395.t1.exon2;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS CDS 1884 1972 . - 0 ID=cds.g2395.t1;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS exon 1372 1525 . - . ID=g2395.t1.exon3;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS CDS 1372 1525 . - 1 ID=cds.g2395.t1;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS exon 972 1040 . - . ID=g2395.t1.exon4;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS CDS 972 1040 . - 0 ID=cds.g2395.t1;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS exon 80 430 . - . ID=g2395.t1.exon5;Parent=g2395.t1 NODE_3242_length_3928_cov_36.9105_potentialcontaminant AUGUSTUS CDS 80 430 . - 0 ID=cds.g2395.t1;Parent=g2395.t1 #PROT g2395.t1 g2395 AKPATNSNSASRSGAVAGSPAVAPGAASGTTPSPSSVSPRGASDVQTAAKQSAQKPPAKAQARKGSATPGVVGTVKPASGAAGAGASTVPAATPPVIPSPSTAEDDENATLLQNVLAETQFPIKDVVRQPTKKETLAKKKAAQAAAAALAASNSTMAAGASPIGAGLSPLPAAGHVPSPLGTVPVQAGNRSVLAQQQQQQQQQQQQQQQQQLQQQQFIQQQAAALAGMVGKARPPAPKSAIGQIPQLQAQQQLHQLQQLQQLQQQQQQQAAALQQGPSMQQPITLMQRDGETKALANKPVAQPTTTLKGKRPSQTLQIPQTQQQQLQLQQQQQQLRQQQQQAQQAQLQQQQQQQQQQQQQQQQQQPKVAAAQQGLASLSPAGVQLWRQFQQGLISQADLIARLGPANLAILQQSRAARTPFWEGTFNCSFKQAEGAPLQMQLPNIVIHKIESAGQVALTGEEQALLKDSTMWPKMFSIGFSPHARELSEQIQTARKKALFNVGPDAAIAMLKERMGTQYIGFSKFDKTDQFYLVVAVIQTSVAAVVVPVTALRNIGRSVQAQAQAQAQAQAQAQAQAQAQAKGQVTAAASSAPLRHQLQLQQLQQQQQQQLQQQQQQLQQQQQQQITPQQQQAILPSILAMQQRAGTATTPLAAQQDQ # ORIGINAL: g7172.t1 original gene structure, not modified by PASA NODE_572_length_20994_cov_39.744 AUGUSTUS gene 7793 16057 . - . ID=g7172;Name=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS mRNA 7793 16057 . - . ID=g7172.t1;Parent=g7172;Name=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 15128 16057 . - . ID=g7172.t1.exon1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 15128 16057 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 14700 14868 . - . ID=g7172.t1.exon2;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 14700 14868 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 14369 14553 . - . ID=g7172.t1.exon3;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 14369 14553 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 13879 14068 . - . ID=g7172.t1.exon4;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 13879 14068 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 13178 13719 . - . ID=g7172.t1.exon5;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 13178 13719 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 12816 12972 . - . ID=g7172.t1.exon6;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 12816 12972 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 12327 12580 . - . ID=g7172.t1.exon7;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 12327 12580 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 11420 12040 . - . ID=g7172.t1.exon8;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 11420 12040 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 11149 11289 . - . ID=g7172.t1.exon9;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 11149 11289 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 10296 11001 . - . ID=g7172.t1.exon10;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 10296 11001 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 9366 10078 . - . ID=g7172.t1.exon11;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 9366 10078 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 9010 9178 . - . ID=g7172.t1.exon12;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 9010 9178 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 8466 8783 . - . ID=g7172.t1.exon13;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 8466 8783 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 8216 8301 . - . ID=g7172.t1.exon14;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 8216 8301 . - 2 ID=cds.g7172.t1;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 7793 7957 . - . ID=g7172.t1.exon15;Parent=g7172.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 7793 7957 . - 0 ID=cds.g7172.t1;Parent=g7172.t1 #PROT g7172.t1 g7172 MASTPRSPRVPRYLLDHARKKQEQVEWKASRDAAAVPPRRRAPSPDAKGASGRTSSGSKHRDAGMDALFGGLFDDDIFSVGNGKGTKEKNDGKKDVKTAKGGKRGDLDHSGDDDDLRAKKGGNGQRPQSASPTRAHGSSPQSLNKKESSPHGVVHVDSRPASQTPHRGRTRAHGARGSESNSANDSYSSDTSDSGDDRASSRKAARAVARASPTIRKTHQKPRFQESADEEEDRKWTARKLSDVMRAVRDATGHLSDSETVSGALRASLQARRSPSPTHRRSVRAVRLNVYRNGAADHGGVAVTARTHEEFLQEARRRLELNADIRRVFVLDGREVGNVCKLKTHTDVVVSLGEDYNGPSSLVVDSVSGLDTNDGPRPHTRRHRKPLAKSLTSSVRRLSSKKRARLLILRNGKYDESHLTVARFGVEQFLTECTEKLGLSKPAQWFFAFDGIEVEDPSDTCPAEEDVWASVVGGRPLWVSCGEPFDPAGPRAFVRYVVGGLRERESALKVGAAAAANEEEAAAIALSLAEIAATVKALNKLGRRIPKEKALEAAEMIPAIARSSRVLSEKRAFRVFVRKDGDAPPAAMSELRPKSAAAARTADSKGVKQDTKGATKQTRPQTAGAARGRGGDDAGVVDGSKLTATRQPKPKPRGTPVMIELMPGAIKDLVAKVVDVCDGALRLGGRAKRVFDASSNTEIKDPWIELRNDMEIIVSCGEALKAVQVHVVGISSYTTIEVPFPSKPPPPPRKGQTARPSTESGGPPSVCPITAAQKKIGERGAESQRWLFRQDGAIASIPDPNVFMCGFRKAPKTYVPVAIHRNELLRLSNPDMAWQWEFTGDGTIRLVRQDDTVVLTIAEPPPGDFGAQFSGDMALSIEAPRPNDPRQRWGIRPDDADIAPNLLQASKRARERAKHSTFDSDEYITSVRPTLQWEKQGLVWPRHSSGEPLCNSGFDIVGTLIARAPPMLTKGGDAATETRDRASALSGSAGIPLLVTRPGESVDRAVVVIAKINTSTVKQESEDESDSDDSSDYGFNYRTEKADRTTNPETPKDLKKSVAAMNAFLDSCTRALALPSAARRIYLPSGEEVTSLSGIERNTHVVVSVATDPALVRSLRPQTPARSSAFARRKTDCDIIKRYFAALDDLSTSVYLEGSSGGSVGVVSEEGAAAAAYEYGRDSRRVSHRPDGQRWTMENDRLFCREQESLALCARDARPRSGCLVVLSKPHNAADGCWSWDNGRLVSKANPLLALSIMQAKGGAGVIVGLELLAEPATPSQLWSLDPSSGALVGFAGTLWQKEFAAALKAGMCTAAVDREGNGHRQSAFMCDTCSEDRRRRRERRRKVRTLHKLETTRGAGKGTKAAKVKKARKDDDDSSNSDDSEQEESAAVPGDSGSSYGSGDEGFMEPTLCESCARTCHNGHRLRRLPKARRFSCDCVRSRGSRRRCLCLGEEEFKVLVENKDSLLEMMERKADRLRSSPDKSLVAATLNPPESVELATARLYRGYAAGSVRVRVFKNDGRADKRESQVISAKTLEELLDEATRKLGMPSAVRRLFGEDGAEITDLRGLTGDGDNRDPVSAYASCGEKFLDPRDIEEVRRLRVSIDREQARLKDEEAKLDSSVTRDDDDDNAGSPGKEKSAEETRRRSAVEQGWDRVEDLKSRLKGLTLKLAPKKKSKTAVHPQSGRFISVDAAKDIEEGPQPVVRLSVRDVDRPDVSALVTARDYERFLDDVTSRLQMHTAVRSVYTPEGYRLRTFADLQQLSKDSTVWVSGKKTLANAEF* # ORIGINAL: g7174.t1 original gene structure, not modified by PASA NODE_572_length_20994_cov_39.744 AUGUSTUS gene 19722 20856 . + . ID=g7174;Name=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS mRNA 19722 20856 . + . ID=g7174.t1;Parent=g7174;Name=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 19722 19799 . + . ID=g7174.t1.exon1;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 19722 19799 . + 0 ID=cds.g7174.t1;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 19900 20166 . + . ID=g7174.t1.exon2;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 19900 20166 . + 0 ID=cds.g7174.t1;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 20457 20543 . + . ID=g7174.t1.exon3;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 20457 20543 . + 0 ID=cds.g7174.t1;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 20740 20856 . + . ID=g7174.t1.exon4;Parent=g7174.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 20740 20856 . + 0 ID=cds.g7174.t1;Parent=g7174.t1 #PROT g7174.t1 g7174 MAQSAARHTRHILTLALVVTWALVAVADFEFRTELRSVVHNGNGRCDRSSGCDFCEEFCVTAPGNAKFPSFLSIFPRLCSWIGEIGVSDRNYFSWESLGGERRFKSFTLTNTVGVTSVDHSIRLIDSDGDDINDNFNGNGDYEQGATGTETAGQTHMDIMQPKCAVATVMDGMSIGAVSSAT* # ORIGINAL: g7171.t1 original gene structure, not modified by PASA NODE_572_length_20994_cov_39.744 AUGUSTUS gene 1856 6996 . + . ID=g7171;Name=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS mRNA 1856 6996 . + . ID=g7171.t1;Parent=g7171;Name=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 1856 1924 . + . ID=g7171.t1.exon1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 1856 1924 . + 0 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 2172 2377 . + . ID=g7171.t1.exon2;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 2172 2377 . + 0 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 2510 2681 . + . ID=g7171.t1.exon3;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 2510 2681 . + 1 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 3164 3273 . + . ID=g7171.t1.exon4;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 3164 3273 . + 0 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 3541 4890 . + . ID=g7171.t1.exon5;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 3541 4890 . + 1 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 5115 5901 . + . ID=g7171.t1.exon6;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 5115 5901 . + 1 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 6121 6240 . + . ID=g7171.t1.exon7;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 6121 6240 . + 0 ID=cds.g7171.t1;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 6559 6996 . + . ID=g7171.t1.exon8;Parent=g7171.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 6559 6996 . + 0 ID=cds.g7171.t1;Parent=g7171.t1 #PROT g7171.t1 g7171 MVFGLKHGWLETTLGKSLASYLRRVRGAGEHIRLGELTPSLRLRPPSLLHRKKLAAFRTGTTRANMRCFVQVLSPSTGDTTASLQIFFDNKRYLFNCGEGTQRLCTEHKIRLVRLGHMFMTRLTWDVVGGLPGLLLTAADAGVTTMNIMGPPGTSKFIQATRYFVYRRNLSLDIIEANHSGLDSFSDEFLTVWPVTIFPVGTEDQGHNASAKRKRTAEEASSLDITGPRTGRVRTLPMDDRLGHPLPPIPGMQQADLCADDNSIRDESMCVDDLERQHSAQHERESGQAGTNPRPSVASAAVCYVCQTVPVPGKFDMQKAKALGVPSGPMCGRLVRGESVVLPDGRVVNPDDCVGVRTPGPVIIVLDCPSETYLDGLVADTFLASFMPGRPGFRTAPQFIAHMAPADIVLSEKYRSWALSFGPLPQHIFLNAGAVAATSVFRDAAIIQARLHTADPVVYPLPFSETAADAESRGGGAAWLAACGYPPAKAAAGELLLRYNLLPQRTEGFDRSAVPPPLNLQDVQTETLAKPGYAELIARLREGRPIVSPTTVGAGVEVVILGTGSAMPSKYRNVSATLLRLADGQSILLDAGEGTYGQLFRRYGRSQIDSIVGSIRCIYISHMHADHHLGAVNILRIRQELVASGKLNLPDSYNEAPIVIGPGALYGWLREYASVCEPLQFTFVLASLLSASDRRRMLNRDRAGLKLDVNAATAAQRAAESAQSATEGGAVGVEQPAVAPLTPPSPLEVYAALLRDQLSLSAASFELERTNRPDANAEHADAAGDNVATVVVEANRDVHMADGEGATAVSERVPSSHGDSNACTHDSTKGHVCESDLPQKLAMASRSVLIPNDVMVRDAQRAYAVLRDEMGFVSVDNVPVIHCRRAYGLVLTHSSGWKMVYSGDTRPCPALIRSGMGATLLLHEATFDDELQSEAVEKAHSTISEALSVGREMRASTTVLTHFSQRYPKVPIIAESNGRATADSEAGKAASEADATRTDNATNPSPVANPGSESSSVPGAPGAAAAQGHTMHVALAFDLMTIELGNPGRAAQTVPAVLMLLEEAVVSADQADASGEAAVPADG* # PASA_UPDATE: g7173.t1, single gene model update, valid-1, status:[pasa:asmbl_8254,status:3], valid-1 NODE_572_length_20994_cov_39.744 . gene 16695 19311 . + . ID=g7173;Name=g7173.t1 NODE_572_length_20994_cov_39.744 . mRNA 16695 19311 . + . ID=g7173.t1;Parent=g7173;Name=g7173.t1 NODE_572_length_20994_cov_39.744 . five_prime_UTR 16695 16752 . + . ID=g7173.t1.utr5p1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 16695 17025 . + . ID=g7173.t1.exon1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 16753 17025 . + 0 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 17118 17208 . + . ID=g7173.t1.exon2;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 17118 17208 . + 0 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 17399 17468 . + . ID=g7173.t1.exon3;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 17399 17468 . + 2 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 17554 17604 . + . ID=g7173.t1.exon4;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 17554 17604 . + 1 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 17700 18000 . + . ID=g7173.t1.exon5;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 17700 18000 . + 1 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 18238 18350 . + . ID=g7173.t1.exon6;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 18238 18350 . + 0 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 18572 18676 . + . ID=g7173.t1.exon7;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 18572 18676 . + 1 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . exon 18764 19311 . + . ID=g7173.t1.exon8;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . CDS 18764 18887 . + 1 ID=cds.g7173.t1;Parent=g7173.t1 NODE_572_length_20994_cov_39.744 . three_prime_UTR 18888 19311 . + . ID=g7173.t1.utr3p1;Parent=g7173.t1 #PROT g7173.t1 g7173 MEKDTPRTLVRRVLREPPSAVRRSPRRQSENAAADPLKASGAGSALVAKTPSATSRPAATQPSTRVRAGRTAKSVDSPASDRVAKETPRTLIRGVLSEANAASVNSRRTRAAALERSLDEPPATDSPLSKRRRISIEKSTGFESGDQDSLAREDQRDEDEESVVSLLSLHEEPMPPASDDELSEDEEEAPLARRAQDSAHTDTASESTDSDDEGDDGETSSGPNTDTDQRMTNTVDGAGVARPDAPAGGEYDGGGGAAAPAKASRGKAAGGLSEAIVRRVFGKLPKGEAGRSILRAVARGTDKFIESVAVDLIAYANHAHRHTIEFGDVECLMRRQGLVDSRAALDTLIRTNLPLEYVEELIPVARARNAVQPKR* # ORIGINAL: g7170.t1 original gene structure, not modified by PASA NODE_572_length_20994_cov_39.744 AUGUSTUS gene 112 1078 . + . ID=g7170;Name=g7170.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS mRNA 112 1078 . + . ID=g7170.t1;Parent=g7170;Name=g7170.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 112 589 . + . ID=g7170.t1.exon1;Parent=g7170.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 112 589 . + 0 ID=cds.g7170.t1;Parent=g7170.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS exon 675 1078 . + . ID=g7170.t1.exon2;Parent=g7170.t1 NODE_572_length_20994_cov_39.744 AUGUSTUS CDS 675 1078 . + 2 ID=cds.g7170.t1;Parent=g7170.t1 #PROT g7170.t1 g7170 SFIPIPASAFSGCTIGVEGCSVSKLQSAAPTAAPDAYRGAAAPDVGDGGSDRVSPLQGADQPAAAGSAPTHSFRACPGSADGPAFERTQLSVIGRVPKQLAKGGGSAASSNSEDGGTTRFPSIANIEKGGKIKVKMQGVGGANSGSGSGSGPGGAGGAAGVQRRANPRSAGNEQSARPDGAPVVCDDANESQGSRVLQPPVSVTATAMEGKRARSTVTQAMSARSPTVSPIESPLPPVYCADPVPAPRAHSPHSPPLAQVRRLIVPVVDEVFEEECIVGGVVVSSATKRNRML* # ORIGINAL: g13347.t1 original gene structure, not modified by PASA NODE_910_length_15971_cov_41.3181 AUGUSTUS gene 7107 12046 . + . ID=g13347;Name=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS mRNA 7107 12046 . + . ID=g13347.t1;Parent=g13347;Name=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 7107 8012 . + . ID=g13347.t1.exon1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 7107 8012 . + 0 ID=cds.g13347.t1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 8427 8831 . + . ID=g13347.t1.exon2;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 8427 8831 . + 0 ID=cds.g13347.t1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 9066 9667 . + . ID=g13347.t1.exon3;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 9066 9667 . + 0 ID=cds.g13347.t1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 9915 11154 . + . ID=g13347.t1.exon4;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 9915 11154 . + 1 ID=cds.g13347.t1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 11666 11774 . + . ID=g13347.t1.exon5;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 11666 11774 . + 0 ID=cds.g13347.t1;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS exon 11925 12046 . + . ID=g13347.t1.exon6;Parent=g13347.t1 NODE_910_length_15971_cov_41.3181 AUGUSTUS CDS 11925 12046 . + 2 ID=cds.g13347.t1;Parent=g13347.t1 #PROT g13347.t1 g13347 MSHNPAAPPPWAQPPGVVGSYPQPFMQPRYPSYHAGTGQYPSAYPPYVQDRDGVIHHPAYGGPHAASAAASRYSAPYGQSAGYMASSPSVGPQYWQVEGSGQLQPRSYNTGGNPRDYPAPLPDVRMGGRSYADQPYHDAASAHGNKTRPDALAVGDRDREYRGPTSGPKADNDSGLARDRPSSRGSVESSPGVKNEHDMHNSASKKRSFAESMGMDGAGSGSDSEDGGEQRSSDHENDSDNDGNGRSSPRGPGFAPRSGIPRRNTMPENARQKLEVVYGTNRHPNGVMRQTLADELGIAFHKVTNWFRNRRQKESLLRRRVEESDRLRGIAPHNPNKRIRPVDSSADGAVDGRHPAQSTAEDSRSHALYQAPHGGYSAPLRQPAEYGGSYGAGRAAAPHGSLVPHPYGAHHHHRSHTNHGQADSASEMHGSHQNALLNPAPGPKHEAQMSDGLFPGNHGPYNPVHGSPAHGHINQSAKARAAQPSHVGRFATGAESAAGRNGAPSAVREIHGVTNPPVNSVAGYEGHHTGRLLLRERVRIAVESGDVAVLKDIIARGARDGSQLTSDSKDLTPPDVVGGDPILSESVAYSVDMPLDADGNTALHVAAASGMPEVLRILVDYGAYADAKNLSGGTPLHSAINGERCYVKMNMMEVARILLSNLPLRNSAGLTPLLEAAHNLASPWLFFKSAAAYYVAALAVVAREAALEMRSSPALTKASIVEDSAVYIPHVKVEEALSASEISRGVATAKPTAVPLVSDHSVKVASPAEAERASVVMNGLFSNAVTANSRTSAPARDNGANTARDLPATISDAKRESKSTEPVLSIAERRCRSPIRVSSGISKGDEVSEKTAGVVSDAKGASMEVSISVECPLGPASGRITPGSQAAAAAKLSDTMRAAAAQSPRERRSGKAESARLGEHVTQSTPAAAVRAVAAGLEPETVAVKEPLITAFDHRHADAIVADVDIDKHCRSVANNDETSAARLKMLEGVMDMLDGDGNSTLQLVLRHDFACDVVRVLLALTEDRSSVIERCKGSVPSGYIRDMLEACEVGMFTLGTAVQELLSLSVSLKPSIQWTQREAPFWNVSKEMVGLHRQLSVLNAELSLERKARVSLEQRLCALEALQSAR* # PASA_UPDATE: g13346.t1, single gene model update, valid-1, status:[pasa:asmbl_9966,status:12], valid-1 NODE_910_length_15971_cov_41.3181 . gene 206 4553 . - . ID=g13346;Name=g13346.t1 NODE_910_length_15971_cov_41.3181 . mRNA 206 4553 . - . ID=g13346.t1;Parent=g13346;Name=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 4260 4553 . - . ID=g13346.t1.exon1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 4260 4553 . - 0 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 3548 4087 . - . ID=g13346.t1.exon2;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 3548 4087 . - 0 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 3040 3141 . - . ID=g13346.t1.exon3;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 3040 3141 . - 0 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 2579 2719 . - . ID=g13346.t1.exon4;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 2579 2719 . - 0 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 1788 2271 . - . ID=g13346.t1.exon5;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 1788 2271 . - 0 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 600 1549 . - . ID=g13346.t1.exon6;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 600 1549 . - 2 ID=cds.g13346.t1;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . exon 206 398 . - . ID=g13346.t1.exon7;Parent=g13346.t1 NODE_910_length_15971_cov_41.3181 . CDS 206 398 . - 0 ID=cds.g13346.t1;Parent=g13346.t1;3_prime_partial=true #PROT g13346.t1 g13346 MSDPAGGTPGDRALREYDESAEEANVYAEEGEVGDNGGSASPPGEGEGEHQVLTALAPMRTELVTGGLADITNSPAYLFLDEMLNTRKLTAERVGKLKDHYGRLHEVLLKTYESEKALLRKAKQLNQDLQVQRVQLDKTGSLVYEDNSEMGELRRDMLRSSNEVALCAERERQLDEEVSELQQQKKELERDLEGTKRHQAEMMEPQIVAIRKSIDELKLDIAQRKQLITKLSEDKGEKDDQVADMRLARDLVLSEQEAEKDRLARATNEPALIAKQTEVLLTASRSIESEMKRLSALFIKLDMELDQQGKKRVEIAEKKLELVGKLDKQRAAIEVKGRQSDAAAKENELAKEKLAALNQERAHLDIALRKITSDVKSEHEGLIRCLRDKDDYLKQLRQATIQLKHVQKSIPSLALILDDRRREVEERKIENAKLKERLKIVHRDLDNYTRLVLEQEKMEKEDRWALESVMAQKTDLEETLYKLQDEERRTNHVITQLSNERDQRARDLMWARHRLLAVIEDCKIKEVAELEDQKLTRELNARLKEFAFMYEVIKNERNKYVNLLQATAQRGAEMREKIKILGNEIEILRADALGRDRVLQKKRLEYSNSYGVRDQLKNEVMKLQGEYNTKRDTIDQQLGEIEKLNAIINRCEERMVLLKTQYEGSVTRRNYTGVQLIDRNDELCILYEKLNIQESVLKTGEMELMGAEEKIRLLRLKAAELKRERELVKRQQPLKKELEDQIVTLQLELLDCQDKTGDCERQLETPENTKRWRKLEGEDPTREDLDKKIESLEMRLAEKEETLLEKDLVHEEVAKLTSRLQRQADAGRKDTLELAKKVNEFQARIRDTTRAMMALVSELAMQQAEAMRLQQEKNDSEDRLDRARARLERGEPPTEDAEQDW # PASA_UPDATE: g13348.t1, single gene model update, valid-1, status:[pasa:asmbl_9967,status:12], valid-1 NODE_910_length_15971_cov_41.3181 . gene 13930 15813 . - . ID=g13348;Name=g13348.t1 NODE_910_length_15971_cov_41.3181 . mRNA 13930 15813 . - . ID=g13348.t1;Parent=g13348;Name=g13348.t1 NODE_910_length_15971_cov_41.3181 . five_prime_UTR 15812 15813 . - . ID=g13348.t1.utr5p1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . exon 15682 15813 . - . ID=g13348.t1.exon1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . CDS 15682 15811 . - 0 ID=cds.g13348.t1;Parent=g13348.t1;5_prime_partial=true NODE_910_length_15971_cov_41.3181 . exon 15028 15216 . - . ID=g13348.t1.exon2;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . CDS 15028 15216 . - 2 ID=cds.g13348.t1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . exon 14699 14775 . - . ID=g13348.t1.exon3;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . CDS 14699 14775 . - 2 ID=cds.g13348.t1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . exon 14408 14497 . - . ID=g13348.t1.exon4;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . CDS 14408 14497 . - 0 ID=cds.g13348.t1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . exon 13930 14174 . - . ID=g13348.t1.exon5;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . CDS 14109 14174 . - 0 ID=cds.g13348.t1;Parent=g13348.t1 NODE_910_length_15971_cov_41.3181 . three_prime_UTR 13930 14108 . - . ID=g13348.t1.utr3p1;Parent=g13348.t1 #PROT g13348.t1 g13348 VGVKLDNKGRVEVNDRFQSSVPSIYAIGDVIHGPMLAHKAEDEGIICVEGLCGGHPHIDYNCVPSVIYTHPEVAWVGKTEEQLKEEKVEYAVGKFPFAANSRAKTNDDTDGFVKVLSHKKTDRILGAHIIGANAGELIAEAVLALEYGASAEDVARVCHAHPTLSEAFREAALAAYCGKAINF* # PASA_UPDATE: g12189.t1, single gene model update, valid-1, status:[pasa:asmbl_7007,status:12],[pasa:asmbl_7008,status:12], valid-1 NODE_4134_length_2139_cov_36.4075 . gene 190 1702 . - . ID=g12189;Name=g12189.t1 NODE_4134_length_2139_cov_36.4075 . mRNA 190 1702 . - . ID=g12189.t1;Parent=g12189;Name=g12189.t1 NODE_4134_length_2139_cov_36.4075 . five_prime_UTR 1614 1702 . - . ID=g12189.t1.utr5p1;Parent=g12189.t1 NODE_4134_length_2139_cov_36.4075 . exon 949 1702 . - . ID=g12189.t1.exon1;Parent=g12189.t1 NODE_4134_length_2139_cov_36.4075 . CDS 949 1613 . - 0 ID=cds.g12189.t1;Parent=g12189.t1 NODE_4134_length_2139_cov_36.4075 . exon 190 598 . - . ID=g12189.t1.exon2;Parent=g12189.t1 NODE_4134_length_2139_cov_36.4075 . CDS 190 598 . - 1 ID=cds.g12189.t1;Parent=g12189.t1;3_prime_partial=true #PROT g12189.t1 g12189 MAHAVSVLLAFVAAVAAVTSMASADTTFSTYDALSAQLNSSPFNETLKKYTLQSIRRALPLYVFLDISRESPEPAFPLRVNIEEALDAVEASNDFKTDAEFQQSLANVFQPLFDAHTRYNKPPPFRYSFFSLPFRLDCIGGRDLLVSARQDILDKYASLYPEETADVATWRNVSGWHLEQIDGEDAFSAVYDFALNKIGYTKEVNSRFNLAVNGYGDSLGYMFYRPQSMFGVPSSASLSLKLTSPSGESAVISPRWLGLYTPPAILPTLADSPAPIRTQTHELEMVRQITRTHGLTSVSAPEPDASFRTLKDGTGVLRVANFVPANYTSFTEIIEDSIAAHRAAGGKRLLIDLRANGG # PASA_UPDATE: g5841.t1, single gene model update, valid-1, status:[pasa:asmbl_6550,status:12], valid-1 NODE_3794_length_2745_cov_39.3086 . gene 775 2745 . + . ID=g5841;Name=g5841.t1 NODE_3794_length_2745_cov_39.3086 . mRNA 775 2745 . + . ID=g5841.t1;Parent=g5841;Name=g5841.t1 NODE_3794_length_2745_cov_39.3086 . five_prime_UTR 775 847 . + . ID=g5841.t1.utr5p1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 775 1163 . + . ID=g5841.t1.exon1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 848 1163 . + 0 ID=cds.g5841.t1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 1293 1355 . + . ID=g5841.t1.exon2;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 1293 1355 . + 2 ID=cds.g5841.t1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 1500 1719 . + . ID=g5841.t1.exon3;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 1500 1719 . + 2 ID=cds.g5841.t1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 1869 2179 . + . ID=g5841.t1.exon4;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 1869 2179 . + 1 ID=cds.g5841.t1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 2308 2590 . + . ID=g5841.t1.exon5;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 2308 2590 . + 2 ID=cds.g5841.t1;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . exon 2689 2745 . + . ID=g5841.t1.exon6;Parent=g5841.t1 NODE_3794_length_2745_cov_39.3086 . CDS 2689 2745 . + 1 ID=cds.g5841.t1;Parent=g5841.t1;3_prime_partial=true #PROT g5841.t1 g5841 MRTMQSSRVRFVAAVAAAACLIAFALEVDAGHRSLADRLSLSRRTSPSSRAALISNATYSYDVKWFEQTLDHFNFANGATFPQRYLINDKYWTLGHKQGPMFFYTGNEGDIEWFCENTGFVWEIAQEFNALVVFAEHRYYGKTMPFGNSSFDLDKVGYLTTPQALADFAVLIRQLKTDLTAHDMPVIAFGGSYGGMLASWFRMHYPNVADGAIAASAPIVQFTGITPAEVFNAIATNDFTAADKRCSEAIRTAFDKLETMLASPEGRAEASSALGLCAPIKTDEDVTTFMAWIEGGLTYLAMTDYPYPTSFLEPMPGWPVKASCDRVVAAIPLAATNFLAPLAASVSVYYNYTGTTTCYDVMSQATQDLGTLGWDYQSCTEMVMPMATDGVRDMFPKSLSREAQHSKGVGVDVDRF # ORIGINAL: g3228.t1 original gene structure, not modified by PASA NODE_575_length_20938_cov_48.5121 AUGUSTUS gene 19358 20147 . - . ID=g3228;Name=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS mRNA 19358 20147 . - . ID=g3228.t1;Parent=g3228;Name=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 20059 20147 . - . ID=g3228.t1.exon1;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 20059 20147 . - 0 ID=cds.g3228.t1;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 19781 19842 . - . ID=g3228.t1.exon2;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 19781 19842 . - 1 ID=cds.g3228.t1;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 19507 19666 . - . ID=g3228.t1.exon3;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 19507 19666 . - 2 ID=cds.g3228.t1;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 19358 19394 . - . ID=g3228.t1.exon4;Parent=g3228.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 19358 19394 . - 1 ID=cds.g3228.t1;Parent=g3228.t1 #PROT g3228.t1 g3228 MVSKSANYCFTSSSDPYGYLLLADVALGSMYELKHSEFVTKLPRNKHSTKGLGTTHPDPSDTQTLPGDDDVTVPYGQGQPSNVSGTSLLYNEFIVYDVSQINIRYLVKLKFNYKR* # ORIGINAL: g3226.t1 original gene structure, not modified by PASA NODE_575_length_20938_cov_48.5121 AUGUSTUS gene 9832 11020 . - . ID=g3226;Name=g3226.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS mRNA 9832 11020 . - . ID=g3226.t1;Parent=g3226;Name=g3226.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 10499 11020 . - . ID=g3226.t1.exon1;Parent=g3226.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 10499 11020 . - 0 ID=cds.g3226.t1;Parent=g3226.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 9832 10317 . - . ID=g3226.t1.exon2;Parent=g3226.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 9832 10317 . - 0 ID=cds.g3226.t1;Parent=g3226.t1 #PROT g3226.t1 g3226 MAAAALQSIRTRLCIIGSGPAAHTAAIYAARAELKPVLFEGFMANGIAAGGQLTTTTDVENFPGFPEGVNGFELVNKMREQSSKFGTEIFSETVTKLDLSTRPFHIFSSEREVVADAVIIATGAVAKRLEFKGSDEANGFWNKGISACAVCDGALPLFRRKPVAVIGGGDSAMEEASFLTKYASKVYIIHRRDELRASKIMQRRALANPKIEFLYSTETVEAYGKNLLEGLKIRNTKTGEISDLPVNGLFFAIGHEPATAFLRGQLKLDEDGYLLTRPGFTSTSVPGVFAAGDVQDKKWRQAITAAGTGCMAALEAEHYLSEIEDGSAHASQSKI* # PASA_UPDATE: g3225.t1, single gene model update, valid-1, status:[pasa:asmbl_8269,status:3], valid-1 NODE_575_length_20938_cov_48.5121 . gene 5638 8805 . - . ID=g3225;Name=g3225.t1 NODE_575_length_20938_cov_48.5121 . mRNA 5638 8805 . - . ID=g3225.t1;Parent=g3225;Name=g3225.t1 NODE_575_length_20938_cov_48.5121 . five_prime_UTR 8730 8805 . - . ID=g3225.t1.utr5p1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . five_prime_UTR 8471 8587 . - . ID=g3225.t1.utr5p2;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 8730 8805 . - . ID=g3225.t1.exon1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 8288 8587 . - . ID=g3225.t1.exon2;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 8288 8470 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 8116 8170 . - . ID=g3225.t1.exon3;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 8116 8170 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 7669 7829 . - . ID=g3225.t1.exon4;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 7669 7829 . - 2 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 7196 7425 . - . ID=g3225.t1.exon5;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 7196 7425 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 6891 6966 . - . ID=g3225.t1.exon6;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 6891 6966 . - 1 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 6531 6662 . - . ID=g3225.t1.exon7;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 6531 6662 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 6138 6248 . - . ID=g3225.t1.exon8;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 6138 6248 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . exon 5638 5983 . - . ID=g3225.t1.exon9;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . CDS 5798 5983 . - 0 ID=cds.g3225.t1;Parent=g3225.t1 NODE_575_length_20938_cov_48.5121 . three_prime_UTR 5638 5797 . - . ID=g3225.t1.utr3p1;Parent=g3225.t1 #PROT g3225.t1 g3225 MSSTFGFPVYQDENAAIVEARKHKRDYDGSAVASAAQGRRPVLGDVSNAMDCNATGQSHKKQRMNNGEGIAVGWPSESPVPMSVERPITTRRQSLSTSTEPARLNDFHSDVRLDPVWCCEYIDDILDYLSTREADARIMPQNGYMRRQRDINPEMRSILIDWLVDVGEEFKLQPETLFLTANFLDRFLSEMSVPRAKLQLVGVTCMLVAAKFEEIYVPEIDQFVGISDNTYKRDEIVRMERVVLRTLRFEMSAVTPRVFARLFFKAAGISDDDTQWLAYFLAELSLLDDGFLAFRPSKIMGAAIAIALSTVGRPHWPASIERYTSMSVGDLRACAHRLHGHFVACPTATHVAVREKYSQPKFGRVAARYRASRVLPF* # PASA_UPDATE: g3227.t1, single gene model update, valid-1, status:[pasa:asmbl_8270,status:3], valid-1 NODE_575_length_20938_cov_48.5121 . gene 11519 18507 . - . ID=g3227;Name=g3227.t1 NODE_575_length_20938_cov_48.5121 . mRNA 11519 18507 . - . ID=g3227.t1;Parent=g3227;Name=g3227.t1 NODE_575_length_20938_cov_48.5121 . five_prime_UTR 18246 18507 . - . ID=g3227.t1.utr5p1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 17938 18507 . - . ID=g3227.t1.exon1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 17938 18245 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 17265 17745 . - . ID=g3227.t1.exon2;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 17265 17745 . - 1 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 16635 17063 . - . ID=g3227.t1.exon3;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 16635 17063 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 16145 16324 . - . ID=g3227.t1.exon4;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 16145 16324 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 15937 16043 . - . ID=g3227.t1.exon5;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 15937 16043 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 15558 15766 . - . ID=g3227.t1.exon6;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 15558 15766 . - 1 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 15305 15408 . - . ID=g3227.t1.exon7;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 15305 15408 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 14775 15031 . - . ID=g3227.t1.exon8;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 14775 15031 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 14579 14616 . - . ID=g3227.t1.exon9;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 14579 14616 . - 1 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 14317 14406 . - . ID=g3227.t1.exon10;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 14317 14406 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 13997 14109 . - . ID=g3227.t1.exon11;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 13997 14109 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 13613 13767 . - . ID=g3227.t1.exon12;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 13613 13767 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 13426 13495 . - . ID=g3227.t1.exon13;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 13426 13495 . - 1 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 13088 13235 . - . ID=g3227.t1.exon14;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 13088 13235 . - 0 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 12704 12880 . - . ID=g3227.t1.exon15;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 12704 12880 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 12513 12560 . - . ID=g3227.t1.exon16;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 12513 12560 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . exon 11519 12350 . - . ID=g3227.t1.exon17;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . CDS 11986 12350 . - 2 ID=cds.g3227.t1;Parent=g3227.t1 NODE_575_length_20938_cov_48.5121 . three_prime_UTR 11519 11985 . - . ID=g3227.t1.utr3p1;Parent=g3227.t1 #PROT g3227.t1 g3227 MSQVAVNVDSTPNMQRRASRSVTGLRRISSLILGQPLEDETFGITSEDLGKIVSFDNRDKPEQLAVLREAGDVEGIARSLKCNLETGIPPPAAENNYAKRQEWYGRNVVPPPPSVSLFSLIVDAFQDRILQILLVGAAVTLTFGLIDDPKSGWTEGIAIFMAIIIVVGVTSGNDYHKDRKFKKILLLQSDKKVKVIRAGAQDQISSWDVQCGDLVELAMGDEVPADGIFVHGLNLTIDESPLTGETVPVKKRREAPFLFSGCQVSDGNGTYIATGVGPLSSGGQIQKMLNEQQSQTTPLQEKLEVFAVQIGYVGLAAGVITFLGLTVRWIISISDETWKWKKLEDLIEFFVIGVTIVVVAVPEGLPLAVTISLAFSMYKMIRDQNFVRHLIASETMGEATCICSDKTGTLTENRMTVTECVVGGQVYQDTFTADTFPTRKLLDLVAECAAINSTCFVKYKEKDPLPVFVGSSTEGALLVWAHKMGKPYEDIRKHVRKIDEATLAFSSDRKRMSSTCVPADSLAPYRMYTKGASEIVLALCKHAITKDGHTEVLGDKTRKWILDHVQRMASDGLRTLVLAYRNFDDIPAIEQDPEEDLTFIGLVGIKDPVRKEVPDAVRQCQAAGLKVRMVTGDNILTAKKISQECGILTPGGVAIEGPVFRALSDKEKTELIPHIQVLARSSPADKFELVRRLKELGEVVAVTGDGTNDAPALKEADVGFAMGQSGTNIAMNASDIVLLDDNFSSIVKAIRWGRNVFDCIRKFLQFQLSVNMVAILITFIGSVSTGSSPLSAVQLLWVNLIMDTLGALALATDDPADDILLRKPHQRTERLITRNMRHYIIVQVFVQTTVLLLVLFVAYPILDIPGSDTKKRDTLVFTTFVFMQIWNEIMARQLTYAIWVFEGLFRNRLFVCILVAISVIQALVVQFGGGFTQTSVLNGYEWLFCQIAAFITLPPVVLSRYVLRWYYKNQVGPSTEEDANKIAFVSVNTEIDSSAVLSHTAPIESGHEPVLAYQNGSSSTKAPVVQQVAHKSSHERSPHGSASGMSQGLHHESSPSIDLAGGPPSYSEAQGNDDDIHTVEVKEADQDDDIDA* # ORIGINAL: g3223.t1 original gene structure, not modified by PASA NODE_575_length_20938_cov_48.5121 AUGUSTUS gene 3035 3744 . + . ID=g3223;Name=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS mRNA 3035 3744 . + . ID=g3223.t1;Parent=g3223;Name=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 3035 3368 . + . ID=g3223.t1.exon1;Parent=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 3035 3368 . + 0 ID=cds.g3223.t1;Parent=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 3484 3519 . + . ID=g3223.t1.exon2;Parent=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 3484 3519 . + 2 ID=cds.g3223.t1;Parent=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 3650 3744 . + . ID=g3223.t1.exon3;Parent=g3223.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 3650 3744 . + 2 ID=cds.g3223.t1;Parent=g3223.t1 #PROT g3223.t1 g3223 MAALAQPPSSVILSGASPSGQQSTAGKQFIPLSLVGGGNGDRGKSSQSYQSSSNDGASASQHTRASSGKGSAESRRRIVTLEKNIEYLQGQHGEMIKGLHEEVDKVQAENQELKFKLLMLGGFDEKDVPVQEQLRPAQNRNAKPVTPKSDGQGQ* # ORIGINAL: g3224.t1 original gene structure, not modified by PASA NODE_575_length_20938_cov_48.5121 AUGUSTUS gene 4136 5176 . + . ID=g3224;Name=g3224.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS mRNA 4136 5176 . + . ID=g3224.t1;Parent=g3224;Name=g3224.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS exon 4136 5176 . + . ID=g3224.t1.exon1;Parent=g3224.t1 NODE_575_length_20938_cov_48.5121 AUGUSTUS CDS 4136 5176 . + 0 ID=cds.g3224.t1;Parent=g3224.t1 #PROT g3224.t1 g3224 MLMSQLEHVRTENARLQALVSQQQGALQRYEAQIAELERREVAMLQRQQSHTQQLPIQQQHAALQTSARDVSADIPDPYQVGGLHAPAAAAGEEDAESVASFNLNVDGERLRTPEGVGALISRIKRLQRDSDAKAAECEAIRTHIRAFVRQMQAVHPEHAHVARAHFASMLGDDARVSTYVHPAPDASLGPVVGVRGGKTRGRATNPTKKTAPFPPNQLPSPHVTSAQPLQLDYEAESHGFLPNIAAAMHPDARRKARAAASGGALQDGAARLLSRDQPRMAAAGDLVGDVDAADAATVVSDDGVVRGYGAILPSIVKPAHGLTNVVRQKRMKEIQKQKAREMLPF* # PASA_UPDATE: g3222.t1, single gene model update, valid-1, status:[pasa:asmbl_8268,status:12], valid-1 NODE_575_length_20938_cov_48.5121 . gene 188 2258 . - . ID=g3222;Name=g3222.t1 NODE_575_length_20938_cov_48.5121 . mRNA 188 2258 . - . ID=g3222.t1;Parent=g3222;Name=g3222.t1 NODE_575_length_20938_cov_48.5121 . five_prime_UTR 2134 2258 . - . ID=g3222.t1.utr5p1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 2124 2258 . - . ID=g3222.t1.exon1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 2124 2133 . - 0 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 1693 1776 . - . ID=g3222.t1.exon2;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 1693 1776 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 1484 1582 . - . ID=g3222.t1.exon3;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 1484 1582 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 1241 1339 . - . ID=g3222.t1.exon4;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 1241 1339 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 1026 1118 . - . ID=g3222.t1.exon5;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 1026 1118 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 696 794 . - . ID=g3222.t1.exon6;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 696 794 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 461 559 . - . ID=g3222.t1.exon7;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 461 559 . - 2 ID=cds.g3222.t1;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . exon 188 283 . - . ID=g3222.t1.exon8;Parent=g3222.t1 NODE_575_length_20938_cov_48.5121 . CDS 188 283 . - 2 ID=cds.g3222.t1;Parent=g3222.t1;3_prime_partial=true #PROT g3222.t1 g3222 MADGFRAEYQPASPRRTYVSRGSSARPMSAPAYALGGPGPANYSVPSQFGRAPAASIKGRHESPDSRGVNPGPAAYTPRGRPSTAVTIKGRLHQHTSDSSMPGPGAYLPNDQHRAPSYSISGRLRHRDVDGSVPGPGEYAPERYRPASPTATIAGRTYAHKIDTSVPGPGQYHISRENTAKSFSIRGRTRLPSDSDNTPGPAAYVPERYRPASPSASIRSRIPQKS # ORIGINAL: g7346.t1 original gene structure, not modified by PASA NODE_3778_length_2775_cov_27.3928 AUGUSTUS gene 66 1345 . - . ID=g7346;Name=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS mRNA 66 1345 . - . ID=g7346.t1;Parent=g7346;Name=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS exon 1274 1345 . - . ID=g7346.t1.exon1;Parent=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS CDS 1274 1345 . - 0 ID=cds.g7346.t1;Parent=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS exon 997 1122 . - . ID=g7346.t1.exon2;Parent=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS CDS 997 1122 . - 0 ID=cds.g7346.t1;Parent=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS exon 66 446 . - . ID=g7346.t1.exon3;Parent=g7346.t1 NODE_3778_length_2775_cov_27.3928 AUGUSTUS CDS 66 446 . - 0 ID=cds.g7346.t1;Parent=g7346.t1 #PROT g7346.t1 g7346 MAARDPVALAVAGITDQSAKMLSVVETAFAQCGDIAIDLHENGGDNDQIRELQTAVLTLAALDSRQELHRRINPEEDPDDDVVVDQASTLPKVCPITQRPFERPVRSRRCGHVYSEAAIRELVKKGRNGEVRCPVPACPERLTAADIARDQALDREIKRRERTDALTQASQHAADAAAVHNVDDSDDNDVVL* # ORIGINAL: g1579.t1 original gene structure, not modified by PASA NODE_3397_length_3562_cov_44.0617 AUGUSTUS gene 2744 3376 . + . ID=g1579;Name=g1579.t1 NODE_3397_length_3562_cov_44.0617 AUGUSTUS mRNA 2744 3376 . + . ID=g1579.t1;Parent=g1579;Name=g1579.t1 NODE_3397_length_3562_cov_44.0617 AUGUSTUS exon 2744 2854 . + . ID=g1579.t1.exon1;Parent=g1579.t1 NODE_3397_length_3562_cov_44.0617 AUGUSTUS CDS 2744 2854 . + 0 ID=cds.g1579.t1;Parent=g1579.t1 NODE_3397_length_3562_cov_44.0617 AUGUSTUS exon 3116 3376 . + . ID=g1579.t1.exon2;Parent=g1579.t1 NODE_3397_length_3562_cov_44.0617 AUGUSTUS CDS 3116 3376 . + 0 ID=cds.g1579.t1;Parent=g1579.t1 #PROT g1579.t1 g1579 MFRILSYATSALRTRGLAAAVLPMRAAPAKKKAVVQKKGGKTGQTKKPTKKTKASKGMNAEERAHLELMQRRLRPPLLRPRPQLSDKEIDYRAFMAKEYARRSLTLHNKTIAALEALRVAGVR* # PASA_UPDATE: g1578.t1, single gene model update, valid-1, status:[pasa:asmbl_5990,status:12], valid-1 NODE_3397_length_3562_cov_44.0617 . gene 23 1306 . - . ID=g1578;Name=g1578.t1 NODE_3397_length_3562_cov_44.0617 . mRNA 23 1306 . - . ID=g1578.t1;Parent=g1578;Name=g1578.t1 NODE_3397_length_3562_cov_44.0617 . five_prime_UTR 1099 1306 . - . ID=g1578.t1.utr5p1;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . exon 904 1306 . - . ID=g1578.t1.exon1;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . CDS 904 1098 . - 0 ID=cds.g1578.t1;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . exon 442 729 . - . ID=g1578.t1.exon2;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . CDS 442 729 . - 0 ID=cds.g1578.t1;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . exon 23 157 . - . ID=g1578.t1.exon3;Parent=g1578.t1 NODE_3397_length_3562_cov_44.0617 . CDS 23 157 . - 0 ID=cds.g1578.t1;Parent=g1578.t1;3_prime_partial=true #PROT g1578.t1 g1578 MSTGEEFELQPTGTGSGSVRRPSYMVALDQPLALVSRIDNLTLGAGVRDSSHSIHSTHSAYAPLPTILETMSSDPTDVDKQIRLLVDALTGHRRTSNGANEGGQSNGDAGKSASNAVPLIESISSWSCRTDDVFSKCVRSINGNEALIAAVMENLNNPVGELNGAIYRWFFEWYKLRSKDGSRFVLQFLPLILWNYLSGVAHNDSK # ORIGINAL: g12429.t1 original gene structure, not modified by PASA NODE_7698_length_415_cov_430.903 AUGUSTUS gene 1 415 . - . ID=g12429;Name=g12429.t1 NODE_7698_length_415_cov_430.903 AUGUSTUS mRNA 1 415 . - . ID=g12429.t1;Parent=g12429;Name=g12429.t1 NODE_7698_length_415_cov_430.903 AUGUSTUS exon 1 415 . - . ID=g12429.t1.exon1;Parent=g12429.t1 NODE_7698_length_415_cov_430.903 AUGUSTUS CDS 1 415 . - 1 ID=cds.g12429.t1;Parent=g12429.t1 #PROT g12429.t1 g12429 VTITESDDAHGVFGFAAGSLSVSTAEEDKAGAGSVVKLTVTRERGLFGAVFVSWSSTTGDAVEQYGPTSGVVSFGEGESSAELVLSVKADGVPELSQTIAVELTTISSGRIDDAKKQSTVVIEESDDPHGVFAFDAES # ORIGINAL: g8658.t1 original gene structure, not modified by PASA NODE_1127_length_13761_cov_43.4866 AUGUSTUS gene 3274 7385 . - . ID=g8658;Name=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS mRNA 3274 7385 . - . ID=g8658.t1;Parent=g8658;Name=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 6789 7385 . - . ID=g8658.t1.exon1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 6789 7385 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 6401 6616 . - . ID=g8658.t1.exon2;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 6401 6616 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 5905 6080 . - . ID=g8658.t1.exon3;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 5905 6080 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 5413 5533 . - . ID=g8658.t1.exon4;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 5413 5533 . - 1 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 5093 5186 . - . ID=g8658.t1.exon5;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 5093 5186 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 4675 4790 . - . ID=g8658.t1.exon6;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 4675 4790 . - 2 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 4374 4478 . - . ID=g8658.t1.exon7;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 4374 4478 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 4074 4185 . - . ID=g8658.t1.exon8;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 4074 4185 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 3741 3907 . - . ID=g8658.t1.exon9;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 3741 3907 . - 2 ID=cds.g8658.t1;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 3274 3537 . - . ID=g8658.t1.exon10;Parent=g8658.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 3274 3537 . - 0 ID=cds.g8658.t1;Parent=g8658.t1 #PROT g8658.t1 g8658 MQGHTVVNIATPTPGKSAARTAPQRRVFGEKHLLLIVFLAFCVICFGAFLFVPELREKYGDVGVARFMRQERNSVSDDSSAGDLGLSSGGDANSPRDGEGEGGLNELVEPAGGDNAAGGADGPADGAGREGEGEGEGENREENGAATGEEERGAAEDEEVERQGEGEGRQGEGAAAGDSEHGKSRLDPQTKERQVFVKKMMKHAWDGYVKHAWGHNELRPASLSFHDTDIFGRAPMGATIVDSLDTLLIMGLFDEYEVAKKWCLEELNFDKHIQVSLFEYNIRFLGGLLTAYALTGEMGFVKKAKELGDRLMPAFNTPTGLPQGLINLASGHSSNYGWAGGSSILAEVGTLDLEFRYLSDASGDPKFAEKVQKVRDHLDRIDKPSGMYPNFMNPFHGSWSSSHASLGALGDSFYEYLIKAWLVSGKTDEQARRMYDAAIEAIRRNMVRRPPAGQGGLTYVAEWQGGGVEHKMDHLACFAGGMFAIGARDQSEEIFQIGAEVTSTCHESYKRSASGIGPEAMRFNPNTYTFTDGNNQYIMRPETAESYFVLYRLTRDQKYRDWGWEMVQAIEKHCRAAAGYAGLSNVQSAHPSQDDVQQSFFMAETLKYLYLLFSDERLMSIDEWVFNTEAHPIPVKPLRGQIPKIREMLMMVGDL* # ORIGINAL: g8660.t1 original gene structure, not modified by PASA NODE_1127_length_13761_cov_43.4866 AUGUSTUS gene 9608 9871 . - . ID=g8660;Name=g8660.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS mRNA 9608 9871 . - . ID=g8660.t1;Parent=g8660;Name=g8660.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 9608 9871 . - . ID=g8660.t1.exon1;Parent=g8660.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 9608 9871 . - 0 ID=cds.g8660.t1;Parent=g8660.t1 #PROT g8660.t1 g8660 MNAILNAGQSSVKGCTLFTTLFPCCECAKTIIQAGIAEIVYISDKSHGKPSAVASRRMLELACIRLRQFVRQDHSSCIEISFSGEAL* # ORIGINAL: g8661.t1 original gene structure, not modified by PASA NODE_1127_length_13761_cov_43.4866 AUGUSTUS gene 12115 13706 . + . ID=g8661;Name=g8661.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS mRNA 12115 13706 . + . ID=g8661.t1;Parent=g8661;Name=g8661.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 12115 12340 . + . ID=g8661.t1.exon1;Parent=g8661.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 12115 12340 . + 0 ID=cds.g8661.t1;Parent=g8661.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS exon 12475 13706 . + . ID=g8661.t1.exon2;Parent=g8661.t1 NODE_1127_length_13761_cov_43.4866 AUGUSTUS CDS 12475 13706 . + 2 ID=cds.g8661.t1;Parent=g8661.t1 #PROT g8661.t1 g8661 MIPRRGASAPSVAASVNPFHNSPTRQARARPSFVPTLADADFECDGGDSDKENIPPGEFQCVESEKKKSDLHKAPASTRTANNAGILVPRKRSFSEALSGFEPVTPKSTRLRLDAPRRAAAVAPARRPSDVMQDDDGLSSFLRAASTAGAAVDGHADADTDSTTLEARMKALAGLRLPTPARARKPSVATAALAPVAHQDEWDLPVDLTMHTTARFLSKSTFAWCASASPADESMALRQSVGGDCGNAPLSNNAALRKALHYYAHPAAPWPACLVKLAGKLSSIPDRDRTPEERADAEYLQTRKDEWVQALRSAYFSVRNGDCPYFHLRSSSFSAVFVSAGVAGSADITARVSRSTRGLRMRLAKEDIAFTMPHGTDSAHTHGGAASLDDSGFGEDDSEGDEEAAIANDMDSLERMNISTRVVSGVETDGGPESMLLFGGSVAVHGLFEFVLNMRHVSGKSLGPQLVPPTIYAPVAFANSSVKMAQ # PASA_UPDATE: g8657.t1, single gene model update, valid-1, status:[pasa:asmbl_486,status:12], valid-1 NODE_1127_length_13761_cov_43.4866 . gene 773 2310 . + . ID=g8657;Name=g8657.t1 NODE_1127_length_13761_cov_43.4866 . mRNA 773 2310 . + . ID=g8657.t1;Parent=g8657;Name=g8657.t1 NODE_1127_length_13761_cov_43.4866 . five_prime_UTR 773 788 . + . ID=g8657.t1.utr5p1;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . exon 773 958 . + . ID=g8657.t1.exon1;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . CDS 789 958 . + 0 ID=cds.g8657.t1;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . exon 1234 1741 . + . ID=g8657.t1.exon2;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . CDS 1234 1741 . + 1 ID=cds.g8657.t1;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . exon 1960 2310 . + . ID=g8657.t1.exon3;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . CDS 1960 2163 . + 0 ID=cds.g8657.t1;Parent=g8657.t1 NODE_1127_length_13761_cov_43.4866 . three_prime_UTR 2164 2310 . + . ID=g8657.t1.utr3p1;Parent=g8657.t1 #PROT g8657.t1 g8657 MQGLRPGSSGGRPHSSGSSSGGRPKSTFEEYTDAHLKENNDHWKRQAAPKTPNFKLCYICGRQFGTSSLAIHQPVCMRKWELEQSKLPPDQRRPMPKPEEFQAIVTKSGKTELEAFNDAAETTFNQGLSPCPNCGRTFLPDRLQVHLRSCKEPKEPREPRPVSRARLPVKTPSADSASDGSSVKAPQKPVVAAASSQKSPVRPAVLAPIKVASDSPGNLGSASRSKTPEGRNGSVAGALRKAQDHESQGQDVPRPRSAQAGGNGFCVECDVPYPTSSAKFCMDCGSKRPGLQP* # PASA_UPDATE: g8659.t1, single gene model update, valid-1, status:[pasa:asmbl_487,status:12], valid-1 NODE_1127_length_13761_cov_43.4866 . gene 7861 9540 . + . ID=g8659;Name=g8659.t1 NODE_1127_length_13761_cov_43.4866 . mRNA 7861 9540 . + . ID=g8659.t1;Parent=g8659;Name=g8659.t1 NODE_1127_length_13761_cov_43.4866 . five_prime_UTR 7861 7900 . + . ID=g8659.t1.utr5p1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . exon 7861 8256 . + . ID=g8659.t1.exon1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . CDS 7901 8256 . + 0 ID=cds.g8659.t1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . exon 8361 8401 . + . ID=g8659.t1.exon2;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . CDS 8361 8401 . + 1 ID=cds.g8659.t1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . exon 8517 8638 . + . ID=g8659.t1.exon3;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . CDS 8517 8638 . + 2 ID=cds.g8659.t1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . exon 9223 9540 . + . ID=g8659.t1.exon4;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . CDS 9223 9348 . + 0 ID=cds.g8659.t1;Parent=g8659.t1 NODE_1127_length_13761_cov_43.4866 . three_prime_UTR 9349 9540 . + . ID=g8659.t1.utr3p1;Parent=g8659.t1 #PROT g8659.t1 g8659 MGGKRKKRVVMGEEDEEEAAEEVQAAQPHALPSMPTYTTQTDSAASFESPLAHRKSRIVTGEGEEEEGENEGRDEFVDAVPYYPPAPVSEKEPSEAVVADAAVAETAADAVVALIETSSISEDSRTGAHKRLYDRNVGVRSALVACTTQHYQGALRQLTACSALLARSQGIVQDSDYHLRLLGDDLAALTSRLDIITSYELIPEIVMPNRSPSN* # ORIGINAL: g1.t1 original gene structure, not modified by PASA NODE_2954_length_4651_cov_35.9541 AUGUSTUS gene 167 1718 . + . ID=g1;Name=g1.t1 NODE_2954_length_4651_cov_35.9541 AUGUSTUS mRNA 167 1718 . + . ID=g1.t1;Parent=g1;Name=g1.t1 NODE_2954_length_4651_cov_35.9541 AUGUSTUS exon 167 367 . + . ID=g1.t1.exon1;Parent=g1.t1 NODE_2954_length_4651_cov_35.9541 AUGUSTUS CDS 167 367 . + 1 ID=cds.g1.t1;Parent=g1.t1 NODE_2954_length_4651_cov_35.9541 AUGUSTUS exon 815 1718 . + . ID=g1.t1.exon2;Parent=g1.t1 NODE_2954_length_4651_cov_35.9541 AUGUSTUS CDS 815 1718 . + 1 ID=cds.g1.t1;Parent=g1.t1 #PROT g1.t1 g1 DLAARNVLVGDDSGELCLKLCDFGLSRYLDDGEYVRRSKRAKLPLKWIPPDVVRTRRFSEFSDVWSFAVTAWEIYSFGQQPYESIRAPQLLAHIEAGGRLLRPALCSERLWAVLVRCWALNPSSRPRFEELAQVLSADNFIVQIVGSAAVTATRASSSVSASRGDGNRRSIDVEMGSISEKTAGISGVDSVEGARRRVKGNMSSENLLSSIDSDDGYAMYGSDATVHLKASGLQSGVGAALSRDAHDAASGASTPCPSRVLSGDPVGDDGYFACIDSAPAVRRQTAAAEYSETPLSATSTGTAAASGARMVRVSRVSRAPGLVDGAWSLSHSQDHATLHADSLPSVLMHNAHYDNTEFDDTNASTSC* # PASA_UPDATE: g2.t1, single gene model update, valid-1, status:[pasa:asmbl_5298,status:12], valid-1 NODE_2954_length_4651_cov_35.9541 . gene 1998 4262 . - . ID=g2;Name=g2.t1 NODE_2954_length_4651_cov_35.9541 . mRNA 1998 4262 . - . ID=g2.t1;Parent=g2;Name=g2.t1 NODE_2954_length_4651_cov_35.9541 . exon 3632 4262 . - . ID=g2.t1.exon1;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . CDS 3632 4262 . - 0 ID=cds.g2.t1;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . exon 3212 3342 . - . ID=g2.t1.exon2;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . CDS 3212 3342 . - 2 ID=cds.g2.t1;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . exon 1998 2903 . - . ID=g2.t1.exon3;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . CDS 2064 2903 . - 0 ID=cds.g2.t1;Parent=g2.t1 NODE_2954_length_4651_cov_35.9541 . three_prime_UTR 1998 2063 . - . ID=g2.t1.utr3p1;Parent=g2.t1 #PROT g2.t1 g2 MSLALIDAKHARTDTCTDYPPAFVFARSAFSDNTLRHNVVDQYDLYGTGSNVAPVIPGQSVYAADNVTPIDATTILLDVDGTLTGAVTSNYSRTSSVSKNYFFDAPSVEPECNSFGVQTSPYDLVSTVIANVAPATGADATYLSFTVNNGPWAARPVIPIYRQLTLPGDSCASPYNVCGAGGTYGSNCTRASLMMGTDTYQAPYLTMNRGVYYIDTNTQPIQSCCPSCGLTETSTFSPNQWYMIWNIYGSPNTKIKYQVYVGSGFNPATDGMFVRTIPHRTIPGFGALNMPVTPDTSGADFSNDAVVIDGVLFITLDHTKIASNYNFTARNPDELCLPRDVCQLSSDGQTCVVADAFAKREPQLISEMSRVCGYWAVRTSGMYPGEQTTFADCPASGCLGYAFKMPTAFVPQPYASVGAKLTSCFPRTRSWSLSLESAPNDTSCPAPSTPSGFCPPPDANGLPPSSNTADYPGAIVPGVRGAASLLRFLDFGEGGEGFGGVRDDSDLAKWNAAMREWETAFQEYQKSTQGQCA* # ORIGINAL: g2721.t1 original gene structure, not modified by PASA NODE_4722_length_1296_cov_37.9427_potentialcontaminant AUGUSTUS gene 721 1200 . - . ID=g2721;Name=g2721.t1 NODE_4722_length_1296_cov_37.9427_potentialcontaminant AUGUSTUS mRNA 721 1200 . - . ID=g2721.t1;Parent=g2721;Name=g2721.t1 NODE_4722_length_1296_cov_37.9427_potentialcontaminant AUGUSTUS exon 721 1200 . - . ID=g2721.t1.exon1;Parent=g2721.t1 NODE_4722_length_1296_cov_37.9427_potentialcontaminant AUGUSTUS CDS 721 1200 . - 0 ID=cds.g2721.t1;Parent=g2721.t1 #PROT g2721.t1 g2721 MNGDYADEAFFYAVRRRSNAGEDDEMMESFGPCGTRMLRLLPWDYDSILRFACHNKGVDEVKDPLLFCAEAAFDRLIAHDAVLRGRLREALWGLVAGVFSVPNVRAALAETHAELAVLAREGVPLINTTANAYKAVELIRRYEKRYDVIALALDKKTQG* # PASA_UPDATE: g6418.t1, single gene model update, valid-1, status:[pasa:asmbl_2875,status:3], valid-1 NODE_1875_length_8770_cov_40.7799 . gene 3319 7571 . - . ID=g6418;Name=g6418.t1 NODE_1875_length_8770_cov_40.7799 . mRNA 3319 7571 . - . ID=g6418.t1;Parent=g6418;Name=g6418.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 7421 7571 . - . ID=g6418.t1.utr5p1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 7311 7312 . - . ID=g6418.t1.utr5p2;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 7421 7571 . - . ID=g6418.t1.exon1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 7230 7312 . - . ID=g6418.t1.exon2;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 7230 7310 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 7006 7082 . - . ID=g6418.t1.exon3;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 7006 7082 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 6649 6733 . - . ID=g6418.t1.exon4;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 6649 6733 . - 1 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 6286 6383 . - . ID=g6418.t1.exon5;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 6286 6383 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 5843 5982 . - . ID=g6418.t1.exon6;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 5843 5982 . - 1 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 5567 5708 . - . ID=g6418.t1.exon7;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 5567 5708 . - 2 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 5154 5310 . - . ID=g6418.t1.exon8;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 5154 5310 . - 1 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 4969 5016 . - . ID=g6418.t1.exon9;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 4969 5016 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 4731 4832 . - . ID=g6418.t1.exon10;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 4731 4832 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 4111 4245 . - . ID=g6418.t1.exon11;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 4111 4245 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . exon 3319 3863 . - . ID=g6418.t1.exon12;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . CDS 3639 3863 . - 0 ID=cds.g6418.t1;Parent=g6418.t1 NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 3319 3638 . - . ID=g6418.t1.utr3p1;Parent=g6418.t1 #PROT g6418.t1 g6418 MSTPPTAASPPGGLRRRRGSSESHDSLMKADKDKDKEKPANPDEVRSSKWKNWWVRFTFTFLMIGGFAFIIYLGPFYLTLLVIGIQMMCFKEIIAIGHVLSKEKKLPWFRVLNWFFLLAANYYFYGESLIYYFQGLVNKEEILIKLAAHHRFISFCLYMSGFVLFVLSLKRGHYKFQFGQFAWTHITLLLIVTQSQFVITNIFEGIIWFLLPAAAVICNDIMAYVFGFFFGRTPLIKLSPKKTWEGFVGGLFSTVVFCFYFSRFLSQYEYFVCPTKYAYGRSHSPHCDIAYHFIPRDFNLPAAVQEILSVIGIHWSTINIAPIQMHSLAVAIFASLIAPFGGFFASGFKRAFQIKDFGDIIPGHGGITDRFDCQYLMATFAFVYHSTFIKTISIAPAALISAFTLLDVDRQIEVFETLKDLLQRKGVAV* # PASA_UPDATE: g6417.t1.3.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2868,status:12],[pasa:asmbl_2873,status:12], valid-1 # PASA_UPDATE: g6417.t1, single gene model update, valid-1, status:[pasa:asmbl_2872,status:12], valid-1 # PASA_UPDATE: g6417.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2871,status:12], valid-1 # PASA_UPDATE: g6417.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2874,status:12], valid-1 # PASA_UPDATE: g6417.t1.4.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2870,status:12], valid-1 NODE_1875_length_8770_cov_40.7799 . gene 214 3112 . + . ID=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . mRNA 214 3112 . + . ID=g6417.t1.3.5b6be70a;Parent=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 214 259 . + . ID=g6417.t1.3.5b6be70a.utr5p1;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 214 382 . + . ID=g6417.t1.3.5b6be70a.exon1;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 260 382 . + 0 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 476 555 . + . ID=g6417.t1.3.5b6be70a.exon2;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 476 555 . + 0 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 671 812 . + . ID=g6417.t1.3.5b6be70a.exon3;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 671 812 . + 1 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 970 1701 . + . ID=g6417.t1.3.5b6be70a.exon4;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 970 1701 . + 0 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 1786 1788 . + . ID=g6417.t1.3.5b6be70a.exon5;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 1786 1788 . + 0 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 2159 3112 . + . ID=g6417.t1.3.5b6be70a.exon6;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 2159 2344 . + 0 ID=cds.g6417.t1.3.5b6be70a;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 2345 3112 . + . ID=g6417.t1.3.5b6be70a.utr3p1;Parent=g6417.t1.3.5b6be70a NODE_1875_length_8770_cov_40.7799 . mRNA 214 3112 . + . ID=g6417.t1;Parent=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 214 259 . + . ID=g6417.t1.utr5p1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 214 382 . + . ID=g6417.t1.exon1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 260 382 . + 0 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 476 555 . + . ID=g6417.t1.exon2;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 476 555 . + 0 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 671 812 . + . ID=g6417.t1.exon3;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 671 812 . + 1 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 970 1701 . + . ID=g6417.t1.exon4;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 970 1701 . + 0 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 1963 1965 . + . ID=g6417.t1.exon5;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 1963 1965 . + 0 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 2159 2340 . + . ID=g6417.t1.exon6;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 2159 2340 . + 0 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . exon 2577 3112 . + . ID=g6417.t1.exon7;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . CDS 2577 2778 . + 1 ID=cds.g6417.t1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 2779 3112 . + . ID=g6417.t1.utr3p1;Parent=g6417.t1 NODE_1875_length_8770_cov_40.7799 . mRNA 214 3112 . + . ID=g6417.t1.1.5b6be70a;Parent=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 214 259 . + . ID=g6417.t1.1.5b6be70a.utr5p1;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 214 382 . + . ID=g6417.t1.1.5b6be70a.exon1;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 260 382 . + 0 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 476 555 . + . ID=g6417.t1.1.5b6be70a.exon2;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 476 555 . + 0 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 671 812 . + . ID=g6417.t1.1.5b6be70a.exon3;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 671 812 . + 1 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 970 1701 . + . ID=g6417.t1.1.5b6be70a.exon4;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 970 1701 . + 0 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 1786 1788 . + . ID=g6417.t1.1.5b6be70a.exon5;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 1786 1788 . + 0 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 2159 2340 . + . ID=g6417.t1.1.5b6be70a.exon6;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 2159 2340 . + 0 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 2577 3112 . + . ID=g6417.t1.1.5b6be70a.exon7;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 2577 2778 . + 1 ID=cds.g6417.t1.1.5b6be70a;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 2779 3112 . + . ID=g6417.t1.1.5b6be70a.utr3p1;Parent=g6417.t1.1.5b6be70a NODE_1875_length_8770_cov_40.7799 . mRNA 214 3112 . + . ID=g6417.t1.2.5b6be70a;Parent=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 214 259 . + . ID=g6417.t1.2.5b6be70a.utr5p1;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 214 382 . + . ID=g6417.t1.2.5b6be70a.exon1;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 260 382 . + 0 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 476 555 . + . ID=g6417.t1.2.5b6be70a.exon2;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 476 555 . + 0 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 671 812 . + . ID=g6417.t1.2.5b6be70a.exon3;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 671 812 . + 1 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 970 1701 . + . ID=g6417.t1.2.5b6be70a.exon4;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 970 1701 . + 0 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 1963 1965 . + . ID=g6417.t1.2.5b6be70a.exon5;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 1963 1965 . + 0 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 2159 3112 . + . ID=g6417.t1.2.5b6be70a.exon6;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 2159 2344 . + 0 ID=cds.g6417.t1.2.5b6be70a;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 2345 3112 . + . ID=g6417.t1.2.5b6be70a.utr3p1;Parent=g6417.t1.2.5b6be70a NODE_1875_length_8770_cov_40.7799 . mRNA 214 3112 . + . ID=g6417.t1.4.5b6be70a;Parent=g6417;Name=g6417.t1 NODE_1875_length_8770_cov_40.7799 . five_prime_UTR 214 259 . + . ID=g6417.t1.4.5b6be70a.utr5p1;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 214 382 . + . ID=g6417.t1.4.5b6be70a.exon1;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 260 382 . + 0 ID=cds.g6417.t1.4.5b6be70a;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 476 555 . + . ID=g6417.t1.4.5b6be70a.exon2;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 476 555 . + 0 ID=cds.g6417.t1.4.5b6be70a;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 671 812 . + . ID=g6417.t1.4.5b6be70a.exon3;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 671 812 . + 1 ID=cds.g6417.t1.4.5b6be70a;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 970 1701 . + . ID=g6417.t1.4.5b6be70a.exon4;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 970 1701 . + 0 ID=cds.g6417.t1.4.5b6be70a;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 1963 2340 . + . ID=g6417.t1.4.5b6be70a.exon5;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . CDS 1963 1980 . + 0 ID=cds.g6417.t1.4.5b6be70a;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . exon 2577 3112 . + . ID=g6417.t1.4.5b6be70a.exon6;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 1981 2340 . + . ID=g6417.t1.4.5b6be70a.utr3p1;Parent=g6417.t1.4.5b6be70a NODE_1875_length_8770_cov_40.7799 . three_prime_UTR 2577 3112 . + . ID=g6417.t1.4.5b6be70a.utr3p2;Parent=g6417.t1.4.5b6be70a #PROT g6417.t1.3.5b6be70a g6417 MSLSSIRGVMANMAGPSVRMALRQTAASAAKRTYVDCTNPKCGEAVVAACNKASRGSPESLRQREEDNKFAMRLVNERRPMHSLEQDFYTTDSVYRVDMRTVWRNSWLFAGYTFQASKPGDYFSYEVDGDNIIIIRGDDNKLRAFYNTCRHRGSRITKKESGHVGKLVCTYHQWTYDRDGKLLRTTWMPSDFNPADNGLIPCHMETVDGLVFINLAEKPIAFDNARSKITRQLKPQGIENAKVAATMTYDVKANWKLVYENNRECYHCDGGHPEYIRANYDTAFTFTTTPDGKPARVTDPGIPRREEIDEHIETLTRRWEKLGFECSSDSSFEGDGWYRASRMPLKKGWQSESMDGKPLCNKLMGDYKEQDMGSMRIHTLPNFWIHCSSDHAVSARITPIDKYNSRVLAHWIVHKDAVEGK* #PROT g6417.t1 g6417 MSLSSIRGVMANMAGPSVRMALRQTAASAAKRTYVDCTNPKCGEAVVAACNKASRGSPESLRQREEDNKFAMRLVNERRPMHSLEQDFYTTDSVYRVDMRTVWRNSWLFAGYTFQASKPGDYFSYEVDGDNIIIIRGDDNKLRAFYNTCRHRGSRITKKESGHVGKLVCTYHQWTYDRDGKLLRTTWMPSDFNPADNGLIPCHMETVDGLVFINLAEKPIAFDNARSKITRQLKPQGIENAKVAATMTYDVKANWKLVYENNRECYHCDGGHPEYIRANYDTAFTFTTTPDGKPARVTDPGIPRREEIDEHIETLTRRWEKLGFECSSDSSFEGDGWYRASRMPLKKGWQSESMDGKPLCNKLMGDYKEQDMGSMRIHTLPNFWIHCSSDHAVSARITPIDKYNSRVLAHWIVHKDAVEGKDYDVEKMLPFWNLTSQQDWELCEVNQRGVNSSRYSPGRLSEKKETGLETFLKWYLRRVSTGIQADH* #PROT g6417.t1.1.5b6be70a g6417 MSLSSIRGVMANMAGPSVRMALRQTAASAAKRTYVDCTNPKCGEAVVAACNKASRGSPESLRQREEDNKFAMRLVNERRPMHSLEQDFYTTDSVYRVDMRTVWRNSWLFAGYTFQASKPGDYFSYEVDGDNIIIIRGDDNKLRAFYNTCRHRGSRITKKESGHVGKLVCTYHQWTYDRDGKLLRTTWMPSDFNPADNGLIPCHMETVDGLVFINLAEKPIAFDNARSKITRQLKPQGIENAKVAATMTYDVKANWKLVYENNRECYHCDGGHPEYIRANYDTAFTFTTTPDGKPARVTDPGIPRREEIDEHIETLTRRWEKLGFECSSDSSFEGDGWYRASRMPLKKGWQSESMDGKPLCNKLMGDYKEQDMGSMRIHTLPNFWIHCSSDHAVSARITPIDKYNSRVLAHWIVHKDAVEGKDYDVEKMLPFWNLTSQQDWELCEVNQRGVNSSRYSPGRLSEKKETGLETFLKWYLRRVSTGIQADH* #PROT g6417.t1.2.5b6be70a g6417 MSLSSIRGVMANMAGPSVRMALRQTAASAAKRTYVDCTNPKCGEAVVAACNKASRGSPESLRQREEDNKFAMRLVNERRPMHSLEQDFYTTDSVYRVDMRTVWRNSWLFAGYTFQASKPGDYFSYEVDGDNIIIIRGDDNKLRAFYNTCRHRGSRITKKESGHVGKLVCTYHQWTYDRDGKLLRTTWMPSDFNPADNGLIPCHMETVDGLVFINLAEKPIAFDNARSKITRQLKPQGIENAKVAATMTYDVKANWKLVYENNRECYHCDGGHPEYIRANYDTAFTFTTTPDGKPARVTDPGIPRREEIDEHIETLTRRWEKLGFECSSDSSFEGDGWYRASRMPLKKGWQSESMDGKPLCNKLMGDYKEQDMGSMRIHTLPNFWIHCSSDHAVSARITPIDKYNSRVLAHWIVHKDAVEGK* #PROT g6417.t1.4.5b6be70a g6417 MSLSSIRGVMANMAGPSVRMALRQTAASAAKRTYVDCTNPKCGEAVVAACNKASRGSPESLRQREEDNKFAMRLVNERRPMHSLEQDFYTTDSVYRVDMRTVWRNSWLFAGYTFQASKPGDYFSYEVDGDNIIIIRGDDNKLRAFYNTCRHRGSRITKKESGHVGKLVCTYHQWTYDRDGKLLRTTWMPSDFNPADNGLIPCHMETVDGLVFINLAEKPIAFDNARSKITRQLKPQGIENAKVAATMTYDVKANWKLVYENNRECYHCDGGHPEYIRANYDTAFTFTTTPDGKPARVTDPGIPRREEIDEHIETLTRRWEKLGFECSSDSSFEGDGWYRASRMPLKKGWQSESMDGKPLCVSID* # ORIGINAL: g6419.t1 original gene structure, not modified by PASA NODE_1875_length_8770_cov_40.7799 AUGUSTUS gene 7991 8712 . + . ID=g6419;Name=g6419.t1 NODE_1875_length_8770_cov_40.7799 AUGUSTUS mRNA 7991 8712 . + . ID=g6419.t1;Parent=g6419;Name=g6419.t1 NODE_1875_length_8770_cov_40.7799 AUGUSTUS exon 7991 8712 . + . ID=g6419.t1.exon1;Parent=g6419.t1 NODE_1875_length_8770_cov_40.7799 AUGUSTUS CDS 7991 8712 . + 0 ID=cds.g6419.t1;Parent=g6419.t1 #PROT g6419.t1 g6419 MSPLFVAIGLLALYFAALRFFNGKPRANEPPLLTGWIPFLGCALSFGKDAEGFMRECKKKYGDIFTLFMAGKRMHFVLDPHTYKTVFRRIDDMQFHPIESKITNEVFGPTMDLVERLNGPVHRQYIQLLQGQSLDTMTMRFQKELERVLLAPKIASREWSSGKLYKFVMRTIFETAGIAVFGDSFYSDEMLQAFIRFDDYFPLLLAGVPIKYLKDANAARTTLQKLFPSNMASACPLMQA # PASA_UPDATE: g7968.t1, single gene model update, valid-1, status:[pasa:asmbl_3048,status:12], valid-1 NODE_1933_length_8471_cov_37.1944 . gene 581 1412 . - . ID=g7968;Name=g7968.t1 NODE_1933_length_8471_cov_37.1944 . mRNA 581 1412 . - . ID=g7968.t1;Parent=g7968;Name=g7968.t1 NODE_1933_length_8471_cov_37.1944 . five_prime_UTR 1381 1412 . - . ID=g7968.t1.utr5p1;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . exon 1337 1412 . - . ID=g7968.t1.exon1;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . CDS 1337 1380 . - 0 ID=cds.g7968.t1;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . exon 1034 1145 . - . ID=g7968.t1.exon2;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . CDS 1034 1145 . - 1 ID=cds.g7968.t1;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . exon 581 859 . - . ID=g7968.t1.exon3;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . CDS 758 859 . - 0 ID=cds.g7968.t1;Parent=g7968.t1 NODE_1933_length_8471_cov_37.1944 . three_prime_UTR 581 757 . - . ID=g7968.t1.utr3p1;Parent=g7968.t1 #PROT g7968.t1 g7968 MRITQALMGGLNWIGKNAKVRRVTMMMRDNTKDRKAAQRQTMIAASFPYINTATEHGHAKKLWAQAKGLDLRSFARELSLNHRSQ* # ORIGINAL: g7969.t1 original gene structure, not modified by PASA NODE_1933_length_8471_cov_37.1944 AUGUSTUS gene 2120 5368 . + . ID=g7969;Name=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS mRNA 2120 5368 . + . ID=g7969.t1;Parent=g7969;Name=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 2120 2208 . + . ID=g7969.t1.exon1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 2120 2208 . + 0 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 2401 2521 . + . ID=g7969.t1.exon2;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 2401 2521 . + 1 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 2784 2996 . + . ID=g7969.t1.exon3;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 2784 2996 . + 0 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 3362 3455 . + . ID=g7969.t1.exon4;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 3362 3455 . + 0 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 3799 3864 . + . ID=g7969.t1.exon5;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 3799 3864 . + 2 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 4147 5211 . + . ID=g7969.t1.exon6;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 4147 5211 . + 2 ID=cds.g7969.t1;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 5358 5368 . + . ID=g7969.t1.exon7;Parent=g7969.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 5358 5368 . + 2 ID=cds.g7969.t1;Parent=g7969.t1 #PROT g7969.t1 g7969 MDGTESSHRTPSVSSHEDACEDAESAYATVLDRKGVISGVLQKKNGPNDAWTTRWLVLRAGELVCYKFEADGPVGNPVERISLENAGFGLVDPTSLSAGFTIATANNSAVHTFRADVADRGPQTVRAETDVVSPWVRQIMTMINQSHKQSARKKSCPEVAVPASLVVPDSSRARRNSDIMLSTSPTEASSSLDNEMARQRARATTAAVGGGTRAPLPNSKSPSYPANSTSVHMRAASQRVRLRKTDTENTDGEEASASPSGHAPLVQSNSLPAHVHLRGSEKKSKRNVRNELLLCVRGAHRAISTLVEGVRDGACDAFDECATDLLESVSQIVSTSVLANSDADDPASRIYADSLKSPHRRLHVGIAALLRAADVSVESPPPSATTLEQISAACHLLLVAAKEIISLALARVKAVEEQQQATGDALNAPETGSGKPSPLLSKKPSSTGVDTAIVGEARPLPALPVAPPRAKTLKKKKPARPSQEAIDGAIESEQRMIASTAALEDEDLGLVTTQEEVDGVLVERIKGGRLDGLIAYLTRGENASGNQSTESN* # ORIGINAL: g7970.t1 original gene structure, not modified by PASA NODE_1933_length_8471_cov_37.1944 AUGUSTUS gene 5830 8342 . + . ID=g7970;Name=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS mRNA 5830 8342 . + . ID=g7970.t1;Parent=g7970;Name=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 5830 6036 . + . ID=g7970.t1.exon1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 5830 6036 . + 0 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 6270 6434 . + . ID=g7970.t1.exon2;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 6270 6434 . + 0 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 6606 6700 . + . ID=g7970.t1.exon3;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 6606 6700 . + 0 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 6879 6957 . + . ID=g7970.t1.exon4;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 6879 6957 . + 1 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 7253 7467 . + . ID=g7970.t1.exon5;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 7253 7467 . + 0 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 7761 7892 . + . ID=g7970.t1.exon6;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 7761 7892 . + 1 ID=cds.g7970.t1;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS exon 8201 8342 . + . ID=g7970.t1.exon7;Parent=g7970.t1 NODE_1933_length_8471_cov_37.1944 AUGUSTUS CDS 8201 8342 . + 1 ID=cds.g7970.t1;Parent=g7970.t1 #PROT g7970.t1 g7970 MPEGDPQNAANRKVIQLRVCNLLRKFVEGHWEDFDAEMVAALNEFVYKIIADGQLNIAKQLRTALLKKKRNASQSALKTTKRMPEPHRPSAPGLGRQLSILDLASEEVARQLTITDSDLYRKIKTPELLIWNKSQTKTNSPNVFSLIQRFNKVSLWVSTLILSQPHIKDRVKIMSKIIDIARYLKTLNNFNSLMALLSGLNNAAVSRLKFTKEDLSRKDREFYDHINALMDFSSSYKNYRNFLHMINPPCVPYIGVYLTDLTFIHDGNQDFLSPGIINFTKRHYVYKVVLEIHQYQQDEYYFAPVKEVTDVFKEFEHKTEEVGFNTCAFLCVFVLLSTLAPSTC* # PASA_UPDATE: g9398.t1, single gene model update, valid-1, status:[pasa:asmbl_1005,status:12],[pasa:asmbl_1006,status:12], valid-1 NODE_1264_length_12570_cov_53.0005 . gene 7490 10143 . + . ID=g9398;Name=g9398.t1 NODE_1264_length_12570_cov_53.0005 . mRNA 7490 10143 . + . ID=g9398.t1;Parent=g9398;Name=g9398.t1 NODE_1264_length_12570_cov_53.0005 . exon 7490 8092 . + . ID=g9398.t1.exon1;Parent=g9398.t1 NODE_1264_length_12570_cov_53.0005 . CDS 7490 8092 . + 0 ID=cds.g9398.t1;Parent=g9398.t1 NODE_1264_length_12570_cov_53.0005 . exon 8275 10143 . + . ID=g9398.t1.exon2;Parent=g9398.t1 NODE_1264_length_12570_cov_53.0005 . CDS 8275 9915 . + 0 ID=cds.g9398.t1;Parent=g9398.t1 NODE_1264_length_12570_cov_53.0005 . three_prime_UTR 9916 10143 . + . ID=g9398.t1.utr3p1;Parent=g9398.t1 #PROT g9398.t1 g9398 MAAAHVGEFPHVVSTGGLVSTLPPMMQTNSANGEATVGLRHASFVSPPVAGKAKRTKISALSAFLTQLRATTGIVPRTASHGDRTNTIASTLPPIGRNASILSQSRPAASVPKGRADRGLPGHGLATMSTGKSVSKELLPDSRPQTRLDDDAEAVLELIDEDLTWSEETIKFRDIAIKTPEILDFHFVTRFFRTLRIVDKDVTHIGHGLLNFEKLEELSLSGNRLTGIDAQNFPQSLRVLHLCANQISDLSPLTTLPQLVHLGVGYNRLASIPPEVSASTWPNILSLDLSFNDLADLVGLVATVRELPKLRSLVVCGNPFTLLPNYRAYMIDALPRILALDDLPAKESEREHFAGASSQKENRMDGVVLHVTIGRMEGHARITDEQTAGELADTLHPVVAPLPSVEFRYVVEYESLEMDDQGKANEQPPHGDRHAQAPALQHGTSESLGLSRLNLRAAPSTVTHVTSVAAAGGQEEHGTAKTSRRNTLLKMWPAADGGIEFDHVDGMPELDLVRLRDFAKRGMVVSLFAEKIVWIMKEKEREKEAVEEGAELEHDPSASSIANRPESRESNKGTDGRRQSAASGKQGGKDRRTSSAQSEKGDKAAAKGKDAKSTTPTQSKKPSPASASTAKGQAGNAKGGKKKGKDDADKDREDAFDRIALPPERIFVGTACVSLADLLVPGSALTTEKKLSITVFPELLQSAAADAEASIPVLCNGCTRVDLAVGVSILPYKARTSNLSVTMAPGH* # PASA_UPDATE: g9395.t1, single gene model update, valid-1, status:[pasa:asmbl_1004,status:12], valid-1 NODE_1264_length_12570_cov_53.0005 . gene 370 1915 . + . ID=g9395;Name=g9395.t1 NODE_1264_length_12570_cov_53.0005 . mRNA 370 1915 . + . ID=g9395.t1;Parent=g9395;Name=g9395.t1 NODE_1264_length_12570_cov_53.0005 . exon 370 505 . + . ID=g9395.t1.exon1;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . CDS 370 505 . + 0 ID=cds.g9395.t1;Parent=g9395.t1;5_prime_partial=true NODE_1264_length_12570_cov_53.0005 . exon 662 843 . + . ID=g9395.t1.exon2;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . CDS 662 843 . + 2 ID=cds.g9395.t1;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . exon 1027 1156 . + . ID=g9395.t1.exon3;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . CDS 1027 1156 . + 0 ID=cds.g9395.t1;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . exon 1550 1915 . + . ID=g9395.t1.exon4;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . CDS 1550 1686 . + 2 ID=cds.g9395.t1;Parent=g9395.t1 NODE_1264_length_12570_cov_53.0005 . three_prime_UTR 1687 1915 . + . ID=g9395.t1.utr3p1;Parent=g9395.t1 #PROT g9395.t1 g9395 VYRREIQLGDGQLTDLQKAYHVVKGATAFELCYHFWEKDVRIECETVLDTWFCLEVLDDRTTILHYLYKKVWPSAQRDGVFICHMRQVDKNRWITNMFPVTHDKAPADKCVRAQSYVTMVAETFINPGVPEGKELTRDDIYAKLTYTASVNPGGWAPASVVRQVSKREYPKFLKVFEKFVTAKVQGKPIMWSWS* # ORIGINAL: g9399.t1 original gene structure, not modified by PASA NODE_1264_length_12570_cov_53.0005 AUGUSTUS gene 11063 12001 . + . ID=g9399;Name=g9399.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS mRNA 11063 12001 . + . ID=g9399.t1;Parent=g9399;Name=g9399.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 11063 11563 . + . ID=g9399.t1.exon1;Parent=g9399.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 11063 11563 . + 0 ID=cds.g9399.t1;Parent=g9399.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 11834 12001 . + . ID=g9399.t1.exon2;Parent=g9399.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 11834 12001 . + 0 ID=cds.g9399.t1;Parent=g9399.t1 #PROT g9399.t1 g9399 MTTPSQLGVVPLASASAATTPTASPRFNNAHRTILPPIRNGPSPLPSQSAHELSSSEDESDAFRLRTRKAMLSRASSAAQLSLKGPLMKRSASAASVLRAAESNWSLGSGVERANSIRNLRARAAELRMSMPLLPQGPIEELPTKPAAPSGLDERLLPPNWRNYIDGAFVVVAPRLGQAEGVFIVPTAKSLFFFTPTHPLRKAALLITTNRNPPLSRIQKGT* # ORIGINAL: g9396.t1 original gene structure, not modified by PASA NODE_1264_length_12570_cov_53.0005 AUGUSTUS gene 2485 4504 . - . ID=g9396;Name=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS mRNA 2485 4504 . - . ID=g9396.t1;Parent=g9396;Name=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 4157 4504 . - . ID=g9396.t1.exon1;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 4157 4504 . - 0 ID=cds.g9396.t1;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 3254 3814 . - . ID=g9396.t1.exon2;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 3254 3814 . - 0 ID=cds.g9396.t1;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 2842 2979 . - . ID=g9396.t1.exon3;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 2842 2979 . - 0 ID=cds.g9396.t1;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS exon 2485 2643 . - . ID=g9396.t1.exon4;Parent=g9396.t1 NODE_1264_length_12570_cov_53.0005 AUGUSTUS CDS 2485 2643 . - 0 ID=cds.g9396.t1;Parent=g9396.t1 #PROT g9396.t1 g9396 MDALAGYGSDSDGSDDGVTRAEPPTQPPKSSLFAKLPPPVGAATVTAAVDAGVPRRTSLFSSLPPPKDARAGAAPAHSDAEAGGATAAPKISAHAAKKLATEEKRKQLFSIPALSKREADDGDDVPNAKRPRTSDATSAPDAPAVTAAPRGMGGLFAALPAPKHSKAASVPSSFLKKSSADSHTASTPSSASQSTPAVQAARVSTTVAPPPHARILRPQQQQQQQQTHAPAPLEVDDMAGPHYPDSYPSYPSAEHPGSDGGAYAYGYADADAYAASYGEASAVAYEDHTQQQAELDRLQNDEKFMRLQGKRARNQPIEIVDMNAKPAHDTQDWQAMYGSMQPQGAKATVKQPKHLMPTQQQRKKHQITYLAYQAKEREFELQNQWASGKQNKVASQKKYGF* # PASA_UPDATE: g9397.t1, single gene model update, valid-1, status:[pasa:asmbl_1003,status:3], valid-1 NODE_1264_length_12570_cov_53.0005 . gene 5085 7014 . - . ID=g9397;Name=g9397.t1 NODE_1264_length_12570_cov_53.0005 . mRNA 5085 7014 . - . ID=g9397.t1;Parent=g9397;Name=g9397.t1 NODE_1264_length_12570_cov_53.0005 . five_prime_UTR 6930 7014 . - . ID=g9397.t1.utr5p1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 6849 7014 . - . ID=g9397.t1.exon1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 6849 6929 . - 0 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 6448 6550 . - . ID=g9397.t1.exon2;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 6448 6550 . - 0 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 6234 6265 . - . ID=g9397.t1.exon3;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 6234 6265 . - 2 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 5927 6001 . - . ID=g9397.t1.exon4;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 5927 6001 . - 0 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 5562 5667 . - . ID=g9397.t1.exon5;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 5562 5667 . - 0 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . exon 5085 5333 . - . ID=g9397.t1.exon6;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . CDS 5245 5333 . - 2 ID=cds.g9397.t1;Parent=g9397.t1 NODE_1264_length_12570_cov_53.0005 . three_prime_UTR 5085 5244 . - . ID=g9397.t1.utr3p1;Parent=g9397.t1 #PROT g9397.t1 g9397 MAAPQQGMDVSQLPIPQLQQFKQSMDEEVQYLQTSFSQLKIMTTRFTDAAEALRAMVPANKGKTALVPLSGSMYVQAVLENTDKVLVDIGTGYFVRKTIKEAQEFYKRKIAFLEENCEKIQAVLTQKRMQRDVVIDVLQMRLQAQAAAQSAAGGSAVQASA* # PASA_UPDATE: g2154.t1, single gene model update, valid-1, status:[pasa:asmbl_5989,status:12], valid-1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . gene 191 1596 . + . ID=g2154;Name=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . mRNA 191 1596 . + . ID=g2154.t1;Parent=g2154;Name=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . five_prime_UTR 191 191 . + . ID=g2154.t1.utr5p1;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . exon 191 275 . + . ID=g2154.t1.exon1;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . CDS 192 275 . + 0 ID=cds.g2154.t1;Parent=g2154.t1;5_prime_partial=true NODE_3396_length_3566_cov_36.2761_potentialcontaminant . exon 467 823 . + . ID=g2154.t1.exon2;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . CDS 467 823 . + 0 ID=cds.g2154.t1;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . exon 1173 1596 . + . ID=g2154.t1.exon3;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . CDS 1173 1388 . + 0 ID=cds.g2154.t1;Parent=g2154.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant . three_prime_UTR 1389 1596 . + . ID=g2154.t1.utr3p1;Parent=g2154.t1 #PROT g2154.t1 g2154 VLSITISNWTTPGLYVCKTPALQCSRDQVISETWAQIKAWLPDLFTDDDLVASYMDPGVTFNADGTVDNYSPLLINTPNSWWNRPTPSPALGEIPNLFIAADYAQAPQNVACMETASEAARLSVNGILDYMGLPATNYPRCTLWPAEADHLGEGFTATLLAPFRAEDELLFKLNKPHAGCKCAACMCPGDGDGLPDAAKAIFKKIMDEINKIIHGGVF* # ORIGINAL: g2155.t1 original gene structure, not modified by PASA NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS gene 2388 3416 . - . ID=g2155;Name=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS mRNA 2388 3416 . - . ID=g2155.t1;Parent=g2155;Name=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS exon 3293 3416 . - . ID=g2155.t1.exon1;Parent=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS CDS 3293 3416 . - 1 ID=cds.g2155.t1;Parent=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS exon 2851 3027 . - . ID=g2155.t1.exon2;Parent=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS CDS 2851 3027 . - 0 ID=cds.g2155.t1;Parent=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS exon 2388 2453 . - . ID=g2155.t1.exon3;Parent=g2155.t1 NODE_3396_length_3566_cov_36.2761_potentialcontaminant AUGUSTUS CDS 2388 2453 . - 0 ID=cds.g2155.t1;Parent=g2155.t1 #PROT g2155.t1 g2155 DVPADQITLAGLRSAPSGQNGPDAAILNQGQAPNVTIPSDQAFFLFPDEVAALLRGDMYAFIATSQADNGIIRGQLQQVPPTSGAAANTQQNLTTQKNMLDQFLGYARVLIVSAFEYFPVC* # PASA_UPDATE: g12780.t1, single gene model update, valid-1, status:[pasa:asmbl_2738,status:12], valid-1 NODE_1828_length_9029_cov_38.4373 . gene 2513 8982 . - . ID=g12780;Name=g12780.t1 NODE_1828_length_9029_cov_38.4373 . mRNA 2513 8982 . - . ID=g12780.t1;Parent=g12780;Name=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 8808 8982 . - . ID=g12780.t1.exon1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 8808 8982 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 8474 8517 . - . ID=g12780.t1.exon2;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 8474 8517 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 8077 8194 . - . ID=g12780.t1.exon3;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 8077 8194 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 7714 7875 . - . ID=g12780.t1.exon4;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 7714 7875 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 7463 7509 . - . ID=g12780.t1.exon5;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 7463 7509 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 7126 7237 . - . ID=g12780.t1.exon6;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 7126 7237 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 6962 6989 . - . ID=g12780.t1.exon7;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 6962 6989 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 6361 6544 . - . ID=g12780.t1.exon8;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 6361 6544 . - 1 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 5597 6170 . - . ID=g12780.t1.exon9;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 5597 6170 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 4560 5362 . - . ID=g12780.t1.exon10;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 4560 5362 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 3958 4228 . - . ID=g12780.t1.exon11;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 3958 4228 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 3434 3576 . - . ID=g12780.t1.exon12;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 3434 3576 . - 2 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . exon 2513 3177 . - . ID=g12780.t1.exon13;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . CDS 2680 3177 . - 0 ID=cds.g12780.t1;Parent=g12780.t1 NODE_1828_length_9029_cov_38.4373 . three_prime_UTR 2513 2679 . - . ID=g12780.t1.utr3p1;Parent=g12780.t1 #PROT g12780.t1 g12780 MPARHVTVPSYLYYFGRNLPYGGYNVEATLATLVPHPYGDLQPMRSFSFSKLHSLIVTEDGAVGAWGFNGKGQLGNGNTIPQEKLSFIQTGHDAFGKIVKVATGQTHSLTLNDRGRVFCFGSNAYGQCAQNISVSQLTAPTLVLAGVDGIEFVDITAGSYFSAACTADGQCWAWGINDNGQLGRGTFTPYEVVPAKVTGIDRVRIVSVSGGDAHAVACSADGLVYAWGSNDRGQLGTTTTGLLGFASTPVRLSFPDNVVIKSVSAGYFHTLALDGRGQVYFWGTDLVRNENFPALATDLVGTIVAKVYAASYTSTVVTVDGRAFVCGFTFGFLWKRWVPFTGLGSARIKAFGAGESVGTALVDHVPIPARFLSNVTVVSESAGVIHIALERLVSTKVPVDGYANVTVSILQHTGDATFGIDFEFATQNVSWGPNDTSIRTVSLRIIDDSVYEEPETLVLMISSTAETSRLGHIIIVDDGDAGVIGFASTTMTVQETEPVAFAVIRRRGNSSGIATAIIDVVPGLSTARQGTANPNFVFSRTVLTWGDGDSDIRSIALFIINDNVPSIPDKYLLLNITSTTAARPDAWQQSLTLKIADSGCPSGFRVSQGSSTDHQPRCVSAAGSASSNSNDLAVALSAGLVGGVVGLLSVAFAVWWRLSGQMRLKLSRATHAEFLEKHVAKQTGLVAAEVPRESVQILDRIGAGEFGIVSRARVIGLDGRPRLCAAKIMKQGATYEDRCNFLEEAAIMQGLHHHHIVALCGIVAADEPMLILLEYVPHGNCLQFVQAIPPSHRLPGGSTIRMLEVFCSHIALGMAYLEQMRVVHRDLAARNVMVGQDAFGEYICKVADFGMSGEMRGDKSYYKKGGREKLPYRWLSIECIRHQKFTHASDCWALGVTMWELFSFGETPYAGIAPSMLLSHLREGNRLAMPFACSHDFFSNIMAPCWSENPDERPAFDSIAAEIAQRLTRAPCVASPAVNRIRRRSNATAIPSNNAIQRGEYAMDVVNMSVTVADESQAHTQPYAEPDPESRGYIVCLGSPSVGRADDKSTVC* # ORIGINAL: g12779.t1 original gene structure, not modified by PASA NODE_1828_length_9029_cov_38.4373 AUGUSTUS gene 1571 2161 . + . ID=g12779;Name=g12779.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS mRNA 1571 2161 . + . ID=g12779.t1;Parent=g12779;Name=g12779.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS exon 1571 1768 . + . ID=g12779.t1.exon1;Parent=g12779.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS CDS 1571 1768 . + 0 ID=cds.g12779.t1;Parent=g12779.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS exon 1925 2161 . + . ID=g12779.t1.exon2;Parent=g12779.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS CDS 1925 2161 . + 0 ID=cds.g12779.t1;Parent=g12779.t1 #PROT g12779.t1 g12779 MPVDAGATRGEHVQDRDIDHVTGSAVAVEVLKFVVPQPEHLKLFLEVDKSVWTSFLDQQPAFLGKQVWVDSTNASLIIHTILWRSYDEWKEIPDGTLYATQERFDSALGRGVRYQLVEEKAYIGLTGFSLWEGWPALPSGGSAT* # ORIGINAL: g12778.t1 original gene structure, not modified by PASA NODE_1828_length_9029_cov_38.4373 AUGUSTUS gene 22 468 . - . ID=g12778;Name=g12778.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS mRNA 22 468 . - . ID=g12778.t1;Parent=g12778;Name=g12778.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS exon 22 468 . - . ID=g12778.t1.exon1;Parent=g12778.t1 NODE_1828_length_9029_cov_38.4373 AUGUSTUS CDS 22 468 . - 0 ID=cds.g12778.t1;Parent=g12778.t1 #PROT g12778.t1 g12778 MSGPRPSPADASGGRPSLAPTLNAPLGMPLGVGFSPLMQPGILAMPLGALSPASIGMDLFLAQQQLMQQQQTLAQQAMLLQQMQASQQSVQPVGLQDHLRRVEMQQLQLLQMQQQQQQQQQQQQQQQQQQQQQQRTASSRQQQQTPATT # ORIGINAL: g3752.t1 original gene structure, not modified by PASA NODE_646_length_19654_cov_41.7099 AUGUSTUS gene 4605 6076 . - . ID=g3752;Name=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS mRNA 4605 6076 . - . ID=g3752.t1;Parent=g3752;Name=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 5959 6076 . - . ID=g3752.t1.exon1;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 5959 6076 . - 0 ID=cds.g3752.t1;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 5664 5788 . - . ID=g3752.t1.exon2;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 5664 5788 . - 2 ID=cds.g3752.t1;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 5445 5582 . - . ID=g3752.t1.exon3;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 5445 5582 . - 0 ID=cds.g3752.t1;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 4605 5354 . - . ID=g3752.t1.exon4;Parent=g3752.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 4605 5354 . - 0 ID=cds.g3752.t1;Parent=g3752.t1 #PROT g3752.t1 g3752 MKAIMSAIVELKHEMWHNKPFAEISDDAEDALTWNAHIRGALLEESTSNPPAWFTSPWLFAECYMYRRIYNIIKKTSTLQTYDVFSDQKQAAFFGARDSISRLCDIIGSFRGRVGEDYNDQLKAVAQFSLWSNKADLSMHAAATPDALAKLQTALEDFGKLAGHIIANCLPSICIAAQNMRTNAGIVDIVLDNAGYELVADLCLGDWLIFSGTALTVRFHLKERPWFVSDACRSDFAWTLEQVASIGGAADACASRWKQYLIEKSWILDDNIFWTSFHDFSAMPRHAPSLYAELAASTLVVLKGDLNYRKLVGDRTFPVTTPVRIAAGQFQPRQVWILRTLKADVVVGLEHGKADELNAMDVNWMVSGEFGVIQQY* # ORIGINAL: g3757.t1 original gene structure, not modified by PASA NODE_646_length_19654_cov_41.7099 AUGUSTUS gene 16301 19611 . + . ID=g3757;Name=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS mRNA 16301 19611 . + . ID=g3757.t1;Parent=g3757;Name=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 16301 16333 . + . ID=g3757.t1.exon1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 16301 16333 . + 0 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 16689 16921 . + . ID=g3757.t1.exon2;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 16689 16921 . + 0 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 17032 17106 . + . ID=g3757.t1.exon3;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 17032 17106 . + 1 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 17402 17948 . + . ID=g3757.t1.exon4;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 17402 17948 . + 1 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 18083 18379 . + . ID=g3757.t1.exon5;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 18083 18379 . + 0 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 18549 19508 . + . ID=g3757.t1.exon6;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 18549 19508 . + 0 ID=cds.g3757.t1;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 19609 19611 . + . ID=g3757.t1.exon7;Parent=g3757.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 19609 19611 . + 0 ID=cds.g3757.t1;Parent=g3757.t1 #PROT g3757.t1 g3757 MDVQRAVTPEVAFVVSLSQDDLDDALTPPLTPGGSSAKCEAAVGGLAGWLSKQGAVGLIRSWKTRWFVFDAGTCRLYYYRSPKDDRPLGSIDIAGALFSLDASAGEEQGHFIISTPDRDYRLSARDNDAMLSWLNGLQEERRTYNARKLALGQSIVVQNLASVRSPATAKRQPKEGLAQVDVRVTARAVQIHVKRSPSPFFICLLRFDSFVLTLAWPLQDTDDEPEPADAIAAANHATRLNSIRQRLTVSLRDIGQTIMQPAQQLKGIVTRRKSHDLDGAETLAEGAVSSSSAAAAALAADTGDSSLPPVTLKDQQQQGVGNTLLRALTFGAMGSPGSTSAPSSPRSRARKSSWYRTPGINQPRCLYCDQAQEAIGTQADEIENMRTELEGKETLIVMLSEKVAQLENESHQRDLFLRASGDEKESLLLRGERRIAELQTALLQSQQNVAAATEVAVILKQQVEEASCQVRTYEEIIAAKDSDLTALADRIADASAVTRLAAEKDRAEETVVQLQRQLAFATAEVKEQHDLRVHSEMMMRRHAVRAQLMEQEGVRWRQKYFKVLETGNADAGDIDANAVSPHPSSSSAHIGSTLPFGGDAAGAIVDMDIAPHDAYGFRARDGSTLEEAPVLTESVADTTRTKWNAYFATRGHRELVKGSELKNLIRLGVPNEFRGEIWQGCIRLWVGDERRMSKGGYYFTLLEDNARKPSKALNQ* # PASA_UPDATE: g3755.t1, single gene model update, valid-1, status:[pasa:asmbl_8664,status:12],[pasa:asmbl_8666,status:12], valid-1 NODE_646_length_19654_cov_41.7099 . gene 9981 12457 . + . ID=g3755;Name=g3755.t1 NODE_646_length_19654_cov_41.7099 . mRNA 9981 12457 . + . ID=g3755.t1;Parent=g3755;Name=g3755.t1 NODE_646_length_19654_cov_41.7099 . five_prime_UTR 9981 10020 . + . ID=g3755.t1.utr5p1;Parent=g3755.t1 NODE_646_length_19654_cov_41.7099 . exon 9981 10163 . + . ID=g3755.t1.exon1;Parent=g3755.t1 NODE_646_length_19654_cov_41.7099 . CDS 10021 10163 . + 0 ID=cds.g3755.t1;Parent=g3755.t1 NODE_646_length_19654_cov_41.7099 . exon 10273 12457 . + . ID=g3755.t1.exon2;Parent=g3755.t1 NODE_646_length_19654_cov_41.7099 . CDS 10273 12457 . + 1 ID=cds.g3755.t1;Parent=g3755.t1 #PROT g3755.t1 g3755 MASFAEDGSAQPPARVQWAADCRSQLRGHGIVELLLEGAGFAGKLKERFEDFQVTELDAEGTLVKVVPSDPSSWTALSTAKRRCRDRALADFDGQARMEAMESVANAASTSTPAAQPVDPAVRFMEGNSVELLVSVIGSPLYEGLCAYALAALESRPEGETGRTGGFDLGAVADKGARHIVHLALRDLFPHLTSRTSGAGSSVVAVLDPCHARLRAQVGRLWADRALRFCGGADRNAMREPSLPLLLPCPFDRDARGQVHSAIKSAFGSFETKSVPTGAPPTVDEHMHHGSYAPELAIAVRRRPRAGGRKRLREDDGDVHAENREVSHIRFVLEKTGLEWMDAVQRLSVALPSRPSADQFAIAGVKDRRGVTVQRVSLRGVDPGDLFMLERRPLPGISIGNIRCPAQILSLGDLGGNRFVVVVRRIPADCVNAVPCRASALAAHGFVNYFGSQRFGSAMDSLDDAGGIMGDSDGNDSDGDRGAHHVGLCILRRDFRSAVAHILLPSPADSPASAVGVAKGMFAGGNVRGALGAMPQSQVREKTLLRALVRHGIDDEGCRLAFMALPHHTRVLYAHAYCSRVWNELATLRVRSHGRAAVAGDFVYHSHTAVAASPLAVAESMPVDTAAEGSGSAVASAVDWEAALPGVALHDAVTVVTDEDVASNRFSLSDILLPLPGHAVRFPGHTMGVALRSILVRDGLKDRSSMRLRSLGINVPGAYRHLVACPKDMSWEWLDCSAGSADDGSERAARFAFTLGPSCYATVCLREMSVGGVAQ* # ORIGINAL: g3756.t1 original gene structure, not modified by PASA NODE_646_length_19654_cov_41.7099 AUGUSTUS gene 12510 15890 . - . ID=g3756;Name=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS mRNA 12510 15890 . - . ID=g3756.t1;Parent=g3756;Name=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 15662 15890 . - . ID=g3756.t1.exon1;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 15662 15890 . - 0 ID=cds.g3756.t1;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 15248 15326 . - . ID=g3756.t1.exon2;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 15248 15326 . - 2 ID=cds.g3756.t1;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 15047 15167 . - . ID=g3756.t1.exon3;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 15047 15167 . - 1 ID=cds.g3756.t1;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 13227 14768 . - . ID=g3756.t1.exon4;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 13227 14768 . - 0 ID=cds.g3756.t1;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 12510 13115 . - . ID=g3756.t1.exon5;Parent=g3756.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 12510 13115 . - 0 ID=cds.g3756.t1;Parent=g3756.t1 #PROT g3756.t1 g3756 MAQTQAGSLALQTHPAALASSQLAGSAAALIEDEGPRLRRVFVGGLPPNVIADELHARFAPFGKVESVEFISDSGSAASTYGKAKWRGCLLRVQEAKELYTKRLEREWADAEASAALAREEAEAEAPEAIGASFEDSNKKGQPVMDFDPTKHAMRIKRIRLDNCPLLPISALPWSLQPTEVLRDDDISDSEPINAILSWKADADSSTVLSAASSDPKRPKEAGRSAKSTQPRQACVGSPAAPAPAAAASQLPARDRRALPSGAGDTSAGDAERDGKCAPAVPVDAHSPPGKSAQTRTSVRELVTQRDSAFAGQAVAAAPLTAASLAGAVAAPVQSHSAPTDQSREHRAKLDAQLAEKRAEANRKRLERMEEKKLEARRVRAVVGSGVAQSLAMTRKRTFSEAEEREGSGRDDVATPALDKSAAPASESDADDHVAVDAGAGAGHFEVDGPASAATAGRNDLLGSDDDDDESEGDDARFAIREVFEGKSGAALLKLQRRMGSDPRFRMDDRFADSSDEEPQDDTARNSEGAGEESHAGASEPTDEELRRERMRALEILGEVVPGARTRPRPAVPHAEGMLPRDDSARRRPGDAHGLVLHYDPTRADAAKFEIAAEAEVEVATKPGRKPPRIDRKRPLEGDGGTDAGDGGRKQPKPLPEVSADRFVDLKSSLSGLFGRSASAAAPVALPSFSLLGGEVLTQTVVDSESSVRPKAVVQAAPGIALSFRRPVAEEDEEWRFERQGEVVDGDRKESRSSAGALAPSRAPIASAPSAQPGAFAGAGGQPRGRFLFGGGKKEKAGGAMANDERDDRPFMRTESLGEIAQYWQSQRKDLTRDFKEKRRTTVRRQQKMSKNRAPQPK* # PASA_UPDATE: g3751.t1, single gene model update, valid-1, status:[pasa:asmbl_8667,status:12], valid-1 NODE_646_length_19654_cov_41.7099 . gene 646 3799 . - . ID=g3751;Name=g3751.t1 NODE_646_length_19654_cov_41.7099 . mRNA 646 3799 . - . ID=g3751.t1;Parent=g3751;Name=g3751.t1 NODE_646_length_19654_cov_41.7099 . five_prime_UTR 3758 3799 . - . ID=g3751.t1.utr5p1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 3685 3799 . - . ID=g3751.t1.exon1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 3685 3757 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 3429 3595 . - . ID=g3751.t1.exon2;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 3429 3595 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 3217 3333 . - . ID=g3751.t1.exon3;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 3217 3333 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 2997 3129 . - . ID=g3751.t1.exon4;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 2997 3129 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 2725 2897 . - . ID=g3751.t1.exon5;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 2725 2897 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 2250 2331 . - . ID=g3751.t1.exon6;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 2250 2331 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 2025 2131 . - . ID=g3751.t1.exon7;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 2025 2131 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 1675 1801 . - . ID=g3751.t1.exon8;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 1675 1801 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 1453 1601 . - . ID=g3751.t1.exon9;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 1453 1601 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 1193 1310 . - . ID=g3751.t1.exon10;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 1193 1310 . - 0 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 947 1081 . - . ID=g3751.t1.exon11;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 947 1081 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . exon 646 811 . - . ID=g3751.t1.exon12;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . CDS 669 811 . - 2 ID=cds.g3751.t1;Parent=g3751.t1 NODE_646_length_19654_cov_41.7099 . three_prime_UTR 646 668 . - . ID=g3751.t1.utr3p1;Parent=g3751.t1 #PROT g3751.t1 g3751 MAAVVKQNACLIVIDGWGIAPNSPGNAITNAHAKWMSGFEHDHQVVPLQASGLYVGLPEGLMGNSEVGHMNIGAGRVVYQDIVRIDLGVKNRTFHKNKALLDAFGAAKAGNGRVHFLGLVSDGGVHSHINHLYALLEAAKEEGVPNAFVHFFGDGRDTSPSSAAGYMRALQQRMNELNYGSVATVTGRYYAMDRDKRWDRVKIAWEALISGTGVSAKDAVTAIEARYAAGETDEFLMPIILDRDGCIRDGDSVVLFDFRSDRMRELAETFIHPPFETTSAVKNLHIVTMTSYKKEFPFAVMFPPQSLDNVLAEWLGHLGVPQYHVAETEKYAHVTFFFNGGRESAFNLEDRKMVPSPKVATYDLKPEMSAADVAAEVVQALNARHYPFVMCNFAPPDMVGHTGKYAEAVRGVEATDAAIGAIYEACEKNGYVLFVTADHGNAEKMLDDVGGPHTAHTTNPVPFVMTSRNHKFAASSESALCDVAPTVLDVMGLEQPADMSGHSLIAK* # ORIGINAL: g3753.t1 original gene structure, not modified by PASA NODE_646_length_19654_cov_41.7099 AUGUSTUS gene 6930 7895 . + . ID=g3753;Name=g3753.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS mRNA 6930 7895 . + . ID=g3753.t1;Parent=g3753;Name=g3753.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 6930 7895 . + . ID=g3753.t1.exon1;Parent=g3753.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 6930 7895 . + 0 ID=cds.g3753.t1;Parent=g3753.t1 #PROT g3753.t1 g3753 MMRTVKPKTQRVKRALDARAPKVVENTKSALIVRGGNTSQAVTDVLRDLANFKKPDAVVLKRKNPFRPFEDSTPLEAFSKKYDASLFLYGSHSKKRPNTLIVGRMFDHLLMDMAELHLESEAIKVLRDFPGEKSSLGSKPLVVFAGDEWERSADLARLRSLLLDFFRGPTVDNVNLAGLDHVMQFSVLEGKVHVRIYRVILKKSGTRLPRVELEEMGPSLDMRLGRTKFASDDVTREALKQPKELRAKREKNVEYDGLKTKSGRIHMQAQDIGKLQTRKVKGLKRAAAEVSADADAAAGETTVPAHRSKRQRRTATQDMDL* # PASA_UPDATE: g3754.t1, single gene model update, valid-1, status:[pasa:asmbl_8669,status:12], valid-1 NODE_646_length_19654_cov_41.7099 . gene 8047 9657 . - . ID=g3754;Name=g3754.t1 NODE_646_length_19654_cov_41.7099 . mRNA 8047 9657 . - . ID=g3754.t1;Parent=g3754;Name=g3754.t1 NODE_646_length_19654_cov_41.7099 . five_prime_UTR 9543 9657 . - . ID=g3754.t1.utr5p1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . exon 9392 9657 . - . ID=g3754.t1.exon1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . CDS 9392 9542 . - 0 ID=cds.g3754.t1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . exon 9169 9254 . - . ID=g3754.t1.exon2;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . CDS 9169 9254 . - 2 ID=cds.g3754.t1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . exon 8886 9020 . - . ID=g3754.t1.exon3;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . CDS 8886 9020 . - 0 ID=cds.g3754.t1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . exon 8516 8662 . - . ID=g3754.t1.exon4;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . CDS 8516 8662 . - 0 ID=cds.g3754.t1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . exon 8047 8289 . - . ID=g3754.t1.exon5;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . CDS 8140 8289 . - 0 ID=cds.g3754.t1;Parent=g3754.t1 NODE_646_length_19654_cov_41.7099 . three_prime_UTR 8047 8139 . - . ID=g3754.t1.utr3p1;Parent=g3754.t1 #PROT g3754.t1 g3754 MASRARVLAAALACLVCAACAPTANSLYMHLGEGEQKCFIEEVPDDTVVMVKYKVQGFNPETKVYQPPAAGVGMHVIVKDPSKDILMQKDFQAEGQIVFTSHEAGEHVICLSTNTTRWFGNNQLRVHINIAVGEGANDYEEIAKEEKLSELQLRIRQLIDQSKMIQKEQAYQRAREARFRETSESTNARVLWWSIVQTAILVVTGYWQIRHLRGFFEAKKLV* # ORIGINAL: g3750.t1 original gene structure, not modified by PASA NODE_646_length_19654_cov_41.7099 AUGUSTUS gene 106 544 . + . ID=g3750;Name=g3750.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS mRNA 106 544 . + . ID=g3750.t1;Parent=g3750;Name=g3750.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 106 366 . + . ID=g3750.t1.exon1;Parent=g3750.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 106 366 . + 1 ID=cds.g3750.t1;Parent=g3750.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS exon 481 544 . + . ID=g3750.t1.exon2;Parent=g3750.t1 NODE_646_length_19654_cov_41.7099 AUGUSTUS CDS 481 544 . + 1 ID=cds.g3750.t1;Parent=g3750.t1 #PROT g3750.t1 g3750 VTAGCIAVPTLLKMAAVLQAKGSSATLWSSKDELPAEIDLGRDYQFHSVFACPVSREQSSDDNPPVLLPCGHCICRVSLQKLSKGSRFKCPYCPCEQTPSQSRPIFF* # ORIGINAL: g10540.t1 original gene structure, not modified by PASA NODE_4114_length_2174_cov_33.3487 AUGUSTUS gene 263 1978 . + . ID=g10540;Name=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS mRNA 263 1978 . + . ID=g10540.t1;Parent=g10540;Name=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS exon 263 375 . + . ID=g10540.t1.exon1;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS CDS 263 375 . + 0 ID=cds.g10540.t1;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS exon 729 838 . + . ID=g10540.t1.exon2;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS CDS 729 838 . + 1 ID=cds.g10540.t1;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS exon 1045 1247 . + . ID=g10540.t1.exon3;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS CDS 1045 1247 . + 2 ID=cds.g10540.t1;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS exon 1459 1687 . + . ID=g10540.t1.exon4;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS CDS 1459 1687 . + 0 ID=cds.g10540.t1;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS exon 1959 1978 . + . ID=g10540.t1.exon5;Parent=g10540.t1 NODE_4114_length_2174_cov_33.3487 AUGUSTUS CDS 1959 1978 . + 2 ID=cds.g10540.t1;Parent=g10540.t1 #PROT g10540.t1 g10540 MYALAETVDCSPQAEVRVPEAGYDGVLFEVEASTGKFRFSFEKTKQGRESRDTAVDIISKQKPQKKGGANTAPKATAASAAATPPAHRGSVKHTEALSSTRISDINRRRLKILESQAELASLHADLVLTGAITEDEFWRGREDLLEAEHESQRASDAALADTGASALSGARAGAGTNSAGLPSQFLAEVRPISDAECGTVKLNIDQPTMQAIFRQYPKALHEFF* # ORIGINAL: g3426.t1 original gene structure, not modified by PASA NODE_2746_length_5255_cov_39.6299 AUGUSTUS gene 1497 4688 . + . ID=g3426;Name=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS mRNA 1497 4688 . + . ID=g3426.t1;Parent=g3426;Name=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 1497 1589 . + . ID=g3426.t1.exon1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 1497 1589 . + 0 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 1861 1932 . + . ID=g3426.t1.exon2;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 1861 1932 . + 0 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 2227 2363 . + . ID=g3426.t1.exon3;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 2227 2363 . + 0 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 2627 2951 . + . ID=g3426.t1.exon4;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 2627 2951 . + 1 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 3176 3615 . + . ID=g3426.t1.exon5;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 3176 3615 . + 0 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 4056 4227 . + . ID=g3426.t1.exon6;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 4056 4227 . + 1 ID=cds.g3426.t1;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS exon 4494 4688 . + . ID=g3426.t1.exon7;Parent=g3426.t1 NODE_2746_length_5255_cov_39.6299 AUGUSTUS CDS 4494 4688 . + 0 ID=cds.g3426.t1;Parent=g3426.t1 #PROT g3426.t1 g3426 MASAASIVRELSEDLPGRQDQIEFLVRAFGRRTDRTVPALFIYGHTATGKTLVVQSLLRRLGLPHVYANCLEHYTPRLFYEGVLSDVRKVAGVTDDDHAGKPCAHPADFVRELARTLLTEPAESGSAREKGASVTSNRTKKGKETASDVRADALIEAVAGERRMHGETVYIVVDNAERLRGDKGSATMLPMLLRLPELLVTCAGSIVHKASDKAPQAGNNNNNNNSSSNNNNNSNSADGGGGNAVARRGTKRGRTGDDDDSPDVTVTATDVTATPRRRVTRSAPGANDTEMTDSATVTAVAMAKTANTHEKTPSKAKGTSAAALAADVPGTVVSASASAPSPSALLGFNSGAFNNIREDPDNGAHGDLFDRFARLVWDVFHGPCRDLNELRHMVGLLYPKYKEPVEDGSAKESDVVRLWRHIDPYFRRVLSRLYLREISSSEWDKIKETKGVIAEDKLREGWHVIVCAMLFFIDCCY* # ORIGINAL: g7582.t1 original gene structure, not modified by PASA NODE_203_length_31761_cov_40.3818 AUGUSTUS gene 2042 23869 . - . ID=g7582;Name=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS mRNA 2042 23869 . - . ID=g7582.t1;Parent=g7582;Name=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 23814 23869 . - . ID=g7582.t1.exon1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 23814 23869 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 23572 23672 . - . ID=g7582.t1.exon2;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 23572 23672 . - 1 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 23309 23394 . - . ID=g7582.t1.exon3;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 23309 23394 . - 2 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 22530 23078 . - . ID=g7582.t1.exon4;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 22530 23078 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 22009 22163 . - . ID=g7582.t1.exon5;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 22009 22163 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 21685 21784 . - . ID=g7582.t1.exon6;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 21685 21784 . - 1 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 21418 21513 . - . ID=g7582.t1.exon7;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 21418 21513 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 21061 21169 . - . ID=g7582.t1.exon8;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 21061 21169 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 20728 20816 . - . ID=g7582.t1.exon9;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 20728 20816 . - 2 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 20268 20350 . - . ID=g7582.t1.exon10;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 20268 20350 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 19982 20055 . - . ID=g7582.t1.exon11;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 19982 20055 . - 1 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 19688 19788 . - . ID=g7582.t1.exon12;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 19688 19788 . - 2 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 18418 19571 . - . ID=g7582.t1.exon13;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 18418 19571 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 6675 18234 . - . ID=g7582.t1.exon14;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 6675 18234 . - 1 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 5916 6449 . - . ID=g7582.t1.exon15;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 5916 6449 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 4206 5766 . - . ID=g7582.t1.exon16;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 4206 5766 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 2596 4007 . - . ID=g7582.t1.exon17;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 2596 4007 . - 2 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 2281 2347 . - . ID=g7582.t1.exon18;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 2281 2347 . - 0 ID=cds.g7582.t1;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS exon 2042 2121 . - . ID=g7582.t1.exon19;Parent=g7582.t1 NODE_203_length_31761_cov_40.3818 AUGUSTUS CDS 2042 2121 . - 2 ID=cds.g7582.t1;Parent=g7582.t1 #PROT g7582.t1 g7582 METTAKPRAHLDEAIALLMDDGSTVTQADMQPLIDAVTSFAGGAMRRRAARDVDPDEVQTAFRAVCALLSRQEALATQSARDAITAAITCIPIQPRLLGAVDSQPLPAISLDRVAVSFHSQQASGAHTPQSAHTKQSGRRMKWMDETHADTARATDAASTPLSRTDATPALSTSFDAFFLRRNGGALLLEATLAVLDENKRTPDTSCVMFAVKVVKLLLMCYMSGHALVAAEKNTRERLVCLVRLLATVGVTRLRTAQDKSVGEALRGALLLMSHSHCGEREMAEAKQSVLSCAFESLSDVCDFAESIVSHGVLPAHEAWFSPKLDVFRSVTLEVAVEVLAELSRADPSTAYRESLMNAMSHSAKNPARLHLVTCAITVGKYAAAEMKRIMAKSTAMTAVLPARTRVHERTRTESGDDSMFGGLFLEESAESASNRSVGLSDIADQSDLNFVTSALDAFTSVIKALGDCDADLTRYTLGDLERSAISSTLTLLGALSVQGLSAIARPVDGLRASIVRFVDGASVEGIADAPFRTALLKDLGYDLLQPGCWSLKYDANLPLVGRLLLSSFVADAPESIVPGSDGQHASLLVWERTVDAVAAASATDGAFESESVDVRVFQLACLAHLYCGSDGRRIALDRAAAALATSMSRHHSAPYACAYLALLFERALAHYSLSGMEGASCDPQALDSKLWALCRHNLFSEASSSLSPSNFRMTAPLGPTEGLPSAINVLSEGVHFALASVAVADVTPPALDAALASGGRFDSLYEDLEQASACSVEYSPDNAHHRNGLMFMSETAFRLLTLLPVPKTIRDAVDGVTWSLGWALLNRIRLVVIRGVTDARESVHAASALVGLLGDATVTTLCGTTQAGLVDCAVSISIAGLRLIAAKMDEEGKRMILGDGLANVLPAIVSALSECGRHRFASTLRDAILTADSQGARPDSQGERVAHLTSQSDAIIDFFSACAMAGSSVGALVESLRKLGYAGAAHTLQAASKTTPLEHSVSNTRAISEVAETTLSTANATLVQEVYAFSNSRTSLPPPGLSMSRLSAFLAWLLPTWSCSADVTALGISASAASACVASPAIAGGSAGRSLLASTLEIERIAQAGRKGKGRADDDTADTEGGSSADVLVCRARLDAILLAVASARGAFLLVKDGVETRVGSCQSARIPAVLATEWFEVMEQCMNDSQASQPNRRELLRVLSKSGQQWADMWLECAMLCDDSASLFLRAFRVLRWLADNSAAVAEGVCAAFALLDKSARTAWVQARIMWTDVDPCGGDQSARVQACEAACDAVRGVCAAATKGGDAFASALLETLLTSLPVGLTKAPATYPAVSRLCVWIALRTDAIGDVASALTPVAVEAHALLEKQKDATRARDAGDAADLLSLALVHIFALVKALYKAAFGQDIIATPDMGLGDEARRRPESSASVGTLTRPGSAVAGSHVHQSHNQHPDADGSDSIAAIDVDVVPEGDLTLALREEAEMRALAERVCTYNSTGKNFQDQHWYFCYTCGLTNSEGCCSVCARVCHKGHDLSYARFSRFFCDCGGGPRSSSCISLRPRPYDKSRSSGDHGRPPKAPSSRHPSRPSSSLASRGEPRPSSRTQVLAGSARAKDDSGVTAASSSAAGASNAKERGAEAAESLIEAATDMPSLEAIGDLGRGMLMSVLGSSSLPALLLALLRSMAESGHIPSFAAADDPSTGDFYPSVTDTPAVCDDLLAPRASSKAVTIENARLKPDGDAIRAFKATSATAGTVPARNSLALWASPGMDRTGAGRTRAIVGSDSDALAIVDASGSGLVRSASLSGVDRKRLLVLSRCNVDCEVVSVASNVAHPRYLAVCGARECNVLTIDDNGAVADQLAVGSPSDDGGASGVILKALWLPGSHIALAVVTPARVFIYDLSSDNLCPARVACPSGNDTIVDATFAGRLSPGGSDGQAVLFVMTLSGVVLAMRLEDIVAGAGPVEMTVRVAFPKEYDQSGTLGASLHYSPALTTLFWSRDDGKLFCGRVRGDFSDVGVLVTDVIFLGRENGASDAPSTATGLGVPPTTPSRGSARSPQADATLHQGTRIEWLEIDGLPGVVASLSRKSNSLGVFSLRRSGVRSQFTRIPARIEGYAAFGSRSAASKRVANACSVLLLTDDGSFHRCSIAEAVASEHAGASGALESTPASQSSALDANRAKAGGRPTATSTPTPASAPTHGQTQAQRSERRAADMLSRILSIASTLSGGSSAATPVGDEASAAPAYRLSEEIERLFPVQVPTITASSASASTAAHATASPAVAQATPKKAPVDFFEHMQHVTKDIAFGGDDLLQAYSATTARQRIMGPNEFVASPRREGFNITVRCTDPSIALVGVRVMVGGASSAHVPTEVRLLGRTVDFKEGARRWYDIPFTRKEALGLVDEVALAFGPCFVRENPPMIDFIEVYGLPVDRLCPIDATAEAELLTGVPGADDKRIVDARVREALHSSLVSALGVASSDVASGDASLRTRVVEFVARLVCDYRLTGALRAEAKVLLVRCLGSSEEYHRTKDTARLMSAYTTLVTNLSAAAYARVVAATRKIGRRRSVNFVAFLDAHSDFIQRLTGTFWHLFGQHRDVFELASHAARPPVEAVVRALVDVLLMELRAKVKNAQGKEDANVASVGARVGKTLREMLFCSDADIRHACSRSCGRLAGVKALSARTKENVDAHSKDRARDGHGEASVGGAHGDAALTPRLAGSRGNSRPQSSTGRRSRTGVDAAIENTLLASSPFGMEMYAPLLGLRPPSAGRGGGGSGRGRGRGGAGGSFGGRSGHSEQSATHGFGFDPFAGHLSAEEAAALAAVMAGGGNNNGDIVRDGYDDSAMDVYEDDAEYGMIEVDELVYECDGCHSIPIVGRRWRCALCANFDLCDTCRNGGFENDEHNPMHPMTAHAVPRDGVARQRAARRSESDSQGMSAPYAYGFAGLASALGYTPSDLARRGRGDAGSSGSNGIAAGLANEGTSTAGASRYGRSIYEVMDSLSAAEHAAADRLRGANARRDDDDNHDVGEGDDDDDDDDDDDDDDDDDDDSGEEGQAGEFFAADGGDGHSGRGSAVVRRRRLVNRLFGDGFEDELDDDADGDGEERAAGGSGVTRARGSMGPAAALTAREGSATESRSDGGRDSASSNDINGRGDASANRNDDNDDNDDDDDDDEGDDDDDEGEYGNDANHGHDNNDGNDDDDGDGGDDDDEEEDAEDAAMLEMALAMSLAEERARQARLRHERDGTAPPTEAVGAHGDDDIAEGAHTPTQLEPGEHFGSRALVRGSSSRNAAGAHGNAVGLEATGFALRNALFNVGGGHAGQSRRNDDDVATEQAARDFERLVGASPQLGQGGVGAGGRLSDGDSTARTSASFAEDAHAELHDNIEVEEVEEIEEDIAEADAEVAAAASRAERTAKVVSVEGVGSGTDVDSKSDTSRRVFALVFELLSGVDSIANARLVGGLSTVAHAQALLLLSSQMMGEIEVERRAISKFLDVVANSLGFSDGSVGDACSDARTVGSRSAFSVRTHASEADVVMIMLVNIMARLKTKTPKTSSETKETSHPRKEVKDAIKPDVAGSAPGASDLEKSERGRSFVGVTVTEGLIARGAMPYLLSVTKALADYLGSARGSSGDDVTAEVTAGAACGALLAASDTASSMDLSPFFASSCSGSSGSSSSSDRNAAGAAVAGATSGPAPKDPFGAVAELALDTVLALARHLARTSCGDDAAALGRLEKEWAPTLCELMWVSKASGASAHRGARKFLSLLCIDRARYSAVRDAFSYTKLVGELTSMLGEHPSRRPLSHEDNVTVVGHLKRALDTAQSRPLGWQQFCADHPSVVPFSFRIASRLAEDAVPHALRLLFCALVPIDVVADAKEASGYVDTDGADPFGALRSKIESLRAKLSSMRPSGGGGGSGRGDSLSASVNISAIETLGGGSAVLGKCKFYGDCARAIDAERKLTEPSVLASFFDAVAGSASSVDALVTDFLLGSRSQGVRADACNLLYFMWRRCGNVTRSCVERALWTEWSHIPSRGRNAAEYFALVAHVATRAESTLGSSSDHVRNIVSLLRRENRAIETHPNTYIYSRLASLIDMDGYYLESDPCLVCSAPDAPFASVKLETLRAETKYTDKTMCARLNHAHTISSLTVSITDARPSRMVKTLNVYFCSRTVGDLGELRNKWGLWTKAKTCLLAPGVSEYRADFALPITATNIMVEYADFYENLLASALEKLTCPRCSRTVTDRHGICRNCGENAHQCRQCRNINYENPRAFMCNECGYSKHGRFDYSVVARQTYAAEPVDSEEDMKKALAAVDRELDAAHQKHQQIAAYRSPIVSLLSAIGEKDDTARDRDGAHSTVAGGGASAMDPSASGTSAELRALIAAMSEVSASLSGSAAAVLQQQQQQLQQQQQQLQQQQQQQQLLQSTSVGGRVSRRIGMLGMLYGKECRAASEAMGRSVQLATAIRREIVAYGVRTASRADESDASADSPEFLFDFGDHVPASPGVGVVLDGPFTHQKGKAHTKHPLSGADADDGGSRDVVAEALTSSSECRCYGCASAFLEQALHLVEQMLHNAGARAAMVSCGLVKDIYEHSLRRGSKAVRVAARRILCLLSTNDAAVTSEIASLVRAHLLAPMAGAAYLDVVPSCRVDVALLTDLCAIEDTCWEDRLRLCVSVLLGAVDAWSDSPVVAEDVILPCLQVVARMCRASSTGGGQRGHGAQGMQPKTQGGQGPAGASAGMGAGAGDGPLRRVSFAGWSAGRPGDSYAAWAARISAAGGEATKESVLQRKYATRWLSRTRSKRSSSTHATAISAKAPIASLLNGTWMQRLLFCRSARTVRVEACSLIESLCSSQPRTLRVLDILTGLLDRLGESGESASEMVTLYRRLTESPSHRLYLVVRGILPRLCLLIEREIERSQALEVRAVASVGLGRGYALKMLVSLLVTFLEDPRAAQKFKSLNLSSAVLGGYLALRRLVVQRSKLLDDAEKDLLSLLQRLTTGSEEETKGFIRACIRMLVPSGSNNYNGDGRAVQIDKKTPRFLFEQLCSVVCPLPAPPQFQLVLTKTPTQEEFIRGAMTNNPYASKEFGPLMRDVKNKICTDLELFGLVEDDFGMELLVANKIIKLDLPISGVYDHVWKRHIAHRDASAGGGASGGSFIASASASGAIPPMVVVYRLQGLDGEATEDIIESVGDDAESEVDPEIEYGITRAIGECGGLKVLLYHLWSIGDLGKERDLALLVLRLLACSMIRTNRIAMLQPGLNALGILLAKLKQAFVQDERGDVAQSLLLVIERIVEEANAGSGARDAVGGTTEEASALHPGEQGNNGASGGSGAGVFTLGNADGGETMTAFLDKIASPFVTKNRKILAAMARILPFLTYGDPKLAEKLVRYFAPHLNFSKLDELHAQGGGADAGGGDVSGVNRTHAECFCRMAESIRPGDRSGRLLKDATLALGIPEAAAAYVRGKNGVPETPAPTGTEASPEWTDFLARPMLPIAIRLLGGLASHHRPTQAALQGAGLIPTAHALEHVSSASTQIGSLAENLLGSLSADNAEVEAEVEAVRATTTARKRALAQAKRAKMLRDLGFKSDSDRIVASEGVQSQLAGLGELTQETGHVCMICREGYAFKGGEVLGLYTFSRRVELDPPGALAPRREKGYSTVTHFHVVHVTCHREAARADRTGRHAKSEWDGASLRNESKCNNLMPMCGPSIPIAAYAACVDKYFGTLGNLGRVESPRVRILLHDIRILLLRYSNQQSFSAESQGGGPESNIKMLPYAAQMALLLLDHKHAVPVTSSPSAAQSSTSRRAYEGALSQFISEPAEQWAASVLNTDGPLYYALLAAFLLPADEYRRRRVLLLRRILLLGHVMASGAGASGVAGPRTRQREPLAYSAYRPFVVYFGLVDAFAALLHDSADKRRKALGTAAAVAWQELAFDAIAAGEAEILAKCDKMLAAYNDEWLPSDSFLEILDVLGILPDILGQYPSCDDFVAASVAPGPS* # PASA_UPDATE: g7583.t1, single gene model update, valid-1, status:[pasa:asmbl_3338,status:3], valid-1 NODE_203_length_31761_cov_40.3818 . gene 24422 29429 . + . ID=g7583;Name=g7583.t1 NODE_203_length_31761_cov_40.3818 . mRNA 24422 29429 . + . ID=g7583.t1;Parent=g7583;Name=g7583.t1 NODE_203_length_31761_cov_40.3818 . five_prime_UTR 24422 24545 . + . ID=g7583.t1.utr5p1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 24422 24649 . + . ID=g7583.t1.exon1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 24546 24649 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 24883 24979 . + . ID=g7583.t1.exon2;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 24883 24979 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 25241 25332 . + . ID=g7583.t1.exon3;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 25241 25332 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 25528 25608 . + . ID=g7583.t1.exon4;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 25528 25608 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 25999 26182 . + . ID=g7583.t1.exon5;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 25999 26182 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 26457 26602 . + . ID=g7583.t1.exon6;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 26457 26602 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 26876 26951 . + . ID=g7583.t1.exon7;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 26876 26951 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 27140 27213 . + . ID=g7583.t1.exon8;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 27140 27213 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 27452 27569 . + . ID=g7583.t1.exon9;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 27452 27569 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 27915 27983 . + . ID=g7583.t1.exon10;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 27915 27983 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 28404 28509 . + . ID=g7583.t1.exon11;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 28404 28509 . + 0 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 28769 28946 . + . ID=g7583.t1.exon12;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 28769 28946 . + 2 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . exon 29139 29429 . + . ID=g7583.t1.exon13;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . CDS 29139 29226 . + 1 ID=cds.g7583.t1;Parent=g7583.t1 NODE_203_length_31761_cov_40.3818 . three_prime_UTR 29227 29429 . + . ID=g7583.t1.utr3p1;Parent=g7583.t1 #PROT g7583.t1 g7583 MARPKSAAGATVLVVCCTLALAALLAVPVDAAKHTLNLSGDQRAVIPVGQFGLQQGGSIELSVENFKATGHKAGLMGFLFRAWGTRSQSMEAQMTVCRLDNSTWGQNAQDSTKPTLVALFEKDLSSLSQFRVTDETFVDLIAISGPTNNTIKMTLTSDKGEGEYNIYFVNCDSLGTGKTASSVSVTIHLTEVNMDGKQITYLAAWERPLPVIYFVFAGIFLVMNIVWIDNLRRNREKTNKLHILMALLVFLKVVSDFADGMKYHTIAHSGNIHEAWGIVYYIFRFLNILFLFTIVALISAGWAFIKPFLGTKEKRILMAVIPLQILVNIAHIVTSEEERGQAGFSMWQTSFYAIDLICCFCVIYPIAGSIKHLRDAAQNGGKAAISMQKLKVFRQFYLFLMLYVYFTRIIVVILVNFFPFKQAWLADVFDESVNLAFFVFVGYKFRPNADNPYFMIPQDDEEIPMMDVQD* # PASA_UPDATE: g7581.t1, single gene model update, valid-1, status:[pasa:asmbl_3337,status:12], valid-1 NODE_203_length_31761_cov_40.3818 . gene 244 1253 . + . ID=g7581;Name=g7581.t1 NODE_203_length_31761_cov_40.3818 . mRNA 244 1253 . + . ID=g7581.t1;Parent=g7581;Name=g7581.t1 NODE_203_length_31761_cov_40.3818 . five_prime_UTR 244 336 . + . ID=g7581.t1.utr5p1;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . exon 244 363 . + . ID=g7581.t1.exon1;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . CDS 337 363 . + 0 ID=cds.g7581.t1;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . exon 656 783 . + . ID=g7581.t1.exon2;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . CDS 656 783 . + 0 ID=cds.g7581.t1;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . exon 971 1253 . + . ID=g7581.t1.exon3;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . CDS 971 1085 . + 1 ID=cds.g7581.t1;Parent=g7581.t1 NODE_203_length_31761_cov_40.3818 . three_prime_UTR 1086 1253 . + . ID=g7581.t1.utr3p1;Parent=g7581.t1 #PROT g7581.t1 g7581 MAHQLALLYQSLGSAGAPLDQYKRHIEGQFDAIKQSTTNGNPPHLTREQIDWMDAIVANILATINSLPEPLINPFQPLIGAIQPDLLQQ* # PASA_UPDATE: g12946.t1, single gene model update, valid-1, status:[pasa:asmbl_7531,status:12], valid-1 NODE_468_length_23176_cov_47.2777 . gene 13742 14627 . - . ID=g12946;Name=g12946.t1 NODE_468_length_23176_cov_47.2777 . mRNA 13742 14627 . - . ID=g12946.t1;Parent=g12946;Name=g12946.t1 NODE_468_length_23176_cov_47.2777 . five_prime_UTR 14428 14627 . - . ID=g12946.t1.utr5p1;Parent=g12946.t1 NODE_468_length_23176_cov_47.2777 . exon 14398 14627 . - . ID=g12946.t1.exon1;Parent=g12946.t1 NODE_468_length_23176_cov_47.2777 . CDS 14398 14427 . - 0 ID=cds.g12946.t1;Parent=g12946.t1 NODE_468_length_23176_cov_47.2777 . exon 13742 14160 . - . ID=g12946.t1.exon2;Parent=g12946.t1 NODE_468_length_23176_cov_47.2777 . CDS 13921 14160 . - 0 ID=cds.g12946.t1;Parent=g12946.t1 NODE_468_length_23176_cov_47.2777 . three_prime_UTR 13742 13920 . - . ID=g12946.t1.utr3p1;Parent=g12946.t1 #PROT g12946.t1 g12946 MSDEALLNIKDVEATSVTLMAAAHYIKDHCAAQNKAFIICHDKFGHPEKCLNEGKAVTDCVRDLWVHPVVLIACALFYFFNSATFLCSV* # ORIGINAL: g12944.t1 original gene structure, not modified by PASA NODE_468_length_23176_cov_47.2777 AUGUSTUS gene 6114 8778 . - . ID=g12944;Name=g12944.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS mRNA 6114 8778 . - . ID=g12944.t1;Parent=g12944;Name=g12944.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 7863 8778 . - . ID=g12944.t1.exon1;Parent=g12944.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 7863 8778 . - 0 ID=cds.g12944.t1;Parent=g12944.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 6114 7636 . - . ID=g12944.t1.exon2;Parent=g12944.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 6114 7636 . - 2 ID=cds.g12944.t1;Parent=g12944.t1 #PROT g12944.t1 g12944 MQPRLAVLRQLRAISPRASPPSKTLPSPSNSSATNTRTSIASRHIPVRRTSHRIHAKASPTPSAFANSTGPMSAYAHRNNIRVSSANQGAMEAYYVDPPSRPVRDARGHLWTTHPVTPAPQPQSRSLATQATHASAQGSHGSVYGSPFAGRTTTTTATTNARFYGADSPHRGSQPNASSHSDAQHAHSGHSGHGGGNIGAVPQGGYRSAPPRAWMKPDGVTVVSARPFVDASYRRNGFSVMSYNVLADSLLYENFALYSQCPPSAKKWKYRRDNLVVEIGDARPDVVCMQEVEHFEFFRYMLKAQGLKGHFVKRTGDKPDGCALFYRDSLFTLVDHSEIEYLRADCPPLDRDNVGMVALLLHKPTGRHVCVLQTHLLYNPRRGDIKLLQAAMLLAEARSVINRNALRIGAAGHNSSNNSAAAALGASESLRVAYGQVTCPVVLCGDLNSTPDSDILSYLINGGIAYAGLDRAHMSGQEEVKRGDSPYTPVSERKKRAALAAASPSPSPTVVTETTATVTTVTVTTQSESADHVESVSGGAGTSSEGHVVSFSHAALCASDVPVASHATPPVNTAKRRKFDPNSILSHDFIPVGLGLTQTSAWEAVPRGEHDGMSGGDGVGARAGVAEAVATAASIAKKPNIDAEVWAELLKLPKSERKGASARIRGEVVRRHVALRSASEGAPTLTHAFSFASAYSAIDPITDVPIVTSAHSEAVGAVDYILYGAYNGDRTDNAFPRVASCNARGDVCAASVRMGVDDAAAGPGEGKGVGLRLAAVLRLRSYDELADLHMLPNWHLSSDHQSLVARFEFEGV* # PASA_UPDATE: g12945.t1, single gene model update, valid-1, status:[pasa:asmbl_7527,status:3], valid-1 # PASA_UPDATE: g12945.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7529,status:3], valid-1 NODE_468_length_23176_cov_47.2777 . gene 9427 12493 . - . ID=g12945;Name=g12945.t1 NODE_468_length_23176_cov_47.2777 . mRNA 9427 12493 . - . ID=g12945.t1;Parent=g12945;Name=g12945.t1 NODE_468_length_23176_cov_47.2777 . five_prime_UTR 12310 12493 . - . ID=g12945.t1.utr5p1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . five_prime_UTR 11924 11987 . - . ID=g12945.t1.utr5p2;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 12310 12493 . - . ID=g12945.t1.exon1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 11876 11987 . - . ID=g12945.t1.exon2;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . CDS 11876 11923 . - 0 ID=cds.g12945.t1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 11272 11407 . - . ID=g12945.t1.exon3;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . CDS 11272 11407 . - 0 ID=cds.g12945.t1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 10805 10893 . - . ID=g12945.t1.exon4;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . CDS 10805 10893 . - 2 ID=cds.g12945.t1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 10101 10268 . - . ID=g12945.t1.exon5;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . CDS 10101 10268 . - 0 ID=cds.g12945.t1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . exon 9427 9748 . - . ID=g12945.t1.exon6;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . CDS 9620 9748 . - 0 ID=cds.g12945.t1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . three_prime_UTR 9427 9619 . - . ID=g12945.t1.utr3p1;Parent=g12945.t1 NODE_468_length_23176_cov_47.2777 . mRNA 9427 12493 . - . ID=g12945.t1.1.5b6be70c;Parent=g12945;Name=g12945.t1 NODE_468_length_23176_cov_47.2777 . five_prime_UTR 11924 12493 . - . ID=g12945.t1.1.5b6be70c.utr5p1;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . exon 11876 12493 . - . ID=g12945.t1.1.5b6be70c.exon1;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . CDS 11876 11923 . - 0 ID=cds.g12945.t1.1.5b6be70c;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . exon 11272 11407 . - . ID=g12945.t1.1.5b6be70c.exon2;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . CDS 11272 11407 . - 0 ID=cds.g12945.t1.1.5b6be70c;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . exon 10805 10893 . - . ID=g12945.t1.1.5b6be70c.exon3;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . CDS 10805 10893 . - 2 ID=cds.g12945.t1.1.5b6be70c;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . exon 10101 10268 . - . ID=g12945.t1.1.5b6be70c.exon4;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . CDS 10101 10268 . - 0 ID=cds.g12945.t1.1.5b6be70c;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . exon 9427 9748 . - . ID=g12945.t1.1.5b6be70c.exon5;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . CDS 9620 9748 . - 0 ID=cds.g12945.t1.1.5b6be70c;Parent=g12945.t1.1.5b6be70c NODE_468_length_23176_cov_47.2777 . three_prime_UTR 9427 9619 . - . ID=g12945.t1.1.5b6be70c.utr3p1;Parent=g12945.t1.1.5b6be70c #PROT g12945.t1 g12945 MNLIFGLRGLFTFVLFIVSVVYFSAIAYSTNNNDLQGSNCFLFYRSASSKCEGCCGYVIAEGVIVMLSCLGWVVVGYAKRTTSTGQMFPTVDLIMAFLLAILTLVAGIIVSAGFAKTCDGVPKCNKLKGYSAVNTAQGAVWVAFVLQVVLTVIMFISRRNARSADKEAAIRTSVPGLAPTDAAGPKAAI* #PROT g12945.t1.1.5b6be70c g12945 MNLIFGLRGLFTFVLFIVSVVYFSAIAYSTNNNDLQGSNCFLFYRSASSKCEGCCGYVIAEGVIVMLSCLGWVVVGYAKRTTSTGQMFPTVDLIMAFLLAILTLVAGIIVSAGFAKTCDGVPKCNKLKGYSAVNTAQGAVWVAFVLQVVLTVIMFISRRNARSADKEAAIRTSVPGLAPTDAAGPKAAI* # PASA_UPDATE: g12948.t1, single gene model update, valid-1, status:[pasa:asmbl_7532,status:3], valid-1 NODE_468_length_23176_cov_47.2777 . gene 19370 21217 . - . ID=g12948;Name=g12948.t1 NODE_468_length_23176_cov_47.2777 . mRNA 19370 21217 . - . ID=g12948.t1;Parent=g12948;Name=g12948.t1 NODE_468_length_23176_cov_47.2777 . five_prime_UTR 21174 21217 . - . ID=g12948.t1.utr5p1;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . exon 20456 21217 . - . ID=g12948.t1.exon1;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . CDS 20456 21173 . - 0 ID=cds.g12948.t1;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . exon 20063 20125 . - . ID=g12948.t1.exon2;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . CDS 20063 20125 . - 2 ID=cds.g12948.t1;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . exon 19370 19664 . - . ID=g12948.t1.exon3;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . CDS 19492 19664 . - 2 ID=cds.g12948.t1;Parent=g12948.t1 NODE_468_length_23176_cov_47.2777 . three_prime_UTR 19370 19491 . - . ID=g12948.t1.utr3p1;Parent=g12948.t1 #PROT g12948.t1 g12948 MASSLGPAAYPTTTDYLADFWQQSHDTWATLWARIAGDRTEWELFVWGTFLVHMTLFWGVNALLAVVDIFQVPKFLIRYKIQPGQNQPLNPWRFAKSCLVVLLNQLFWLPALTAAAFPIAQWRGISALLPLPRFERVIFDIAVFGLLEEVGFYYSHRALHHPIVYKNIHKMHHEWTAPIGISALYCHPLEFFLSNLFPIILGPLIMGSHLLTMWLWFSMAIIVTVNVHSGYHFPLMPSPEFHDFHHLKFNNNFGVIGILDYLHGTDQKFRSSKQFQNHKTLLSLEPLVAASSYIHSDDAVKTPSKRESLPRKAKKAM* # ORIGINAL: g12943.t1 original gene structure, not modified by PASA NODE_468_length_23176_cov_47.2777 AUGUSTUS gene 362 5114 . + . ID=g12943;Name=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS mRNA 362 5114 . + . ID=g12943.t1;Parent=g12943;Name=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 362 901 . + . ID=g12943.t1.exon1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 362 901 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 1242 1365 . + . ID=g12943.t1.exon2;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 1242 1365 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 1563 1836 . + . ID=g12943.t1.exon3;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 1563 1836 . + 2 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 2047 2288 . + . ID=g12943.t1.exon4;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 2047 2288 . + 1 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 2630 2739 . + . ID=g12943.t1.exon5;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 2630 2739 . + 2 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 3155 3439 . + . ID=g12943.t1.exon6;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 3155 3439 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 3623 3736 . + . ID=g12943.t1.exon7;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 3623 3736 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 4000 4173 . + . ID=g12943.t1.exon8;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 4000 4173 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 4449 5114 . + . ID=g12943.t1.exon9;Parent=g12943.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 4449 5114 . + 0 ID=cds.g12943.t1;Parent=g12943.t1 #PROT g12943.t1 g12943 IDGILNSRENADALDYAKLLFETGNRNPSNGFNGAIGDFCSGKSGMLVLWMGFANTFRSLSSCNATGKLGDIAFYTLPSHGVTKKHIMQLGGMGMHISKYTKQEALAKEFIRYVTTRDFQLKWGTNGGYTVRKSVVADPLFLSTSEPGQCASYNYIYLQSFPLVKDFWNLPIYNDLLQIQNYHLTQALVGNMSSANALNLAAKEQQQKMDKYYPCGPKCPTVADPLAYSEPIAVVAWILIALGVGCALIFCALVYRWRENRAMKAANPSFLFAILAGLLVYYCSIIPFMGTVTDASCVLRIWMLCVGIALILGNLIAKNILVWKIFNNPKLARLAVSSRDLWMISLGILLGEIIPLMIYTIHDRPRPSYGTRLDADNQWRCRSNDGDFGSIMIGILLAYNGLLLVAGCGLGYLTRKLPHRFNESKFIAFSMYNFLMCAAVATAIGLIPNTNVELSFAFTLFPIWVSATFTMMCIYLPKFRGVLRPHTISEENTSDHKPDIQPQYQRKLNVNNMRRRKSVIELAKRVEGTVTMRLGFGVLDRWNLRYLIIDCQAEYIAHFTSVEDTTGTVVTFDRIATIEFDDKLNELIFSLVDGRQVCVMPSREVKDIYPWFKMICERMGQVDEDNRPRASSSGGRELVKLGESLSASAGGRSPRMSPRGSISRGANPSPAQSAAAATLSGVQFALSSPAARHSLAALSSAASMPMEMDVVVDASPRPSSEAHAHAHMPTPTLLVVDVCDDDADGRLVPSPNGRVRGSYVVAMAGAAHRNTNGGGLSAAHATQASDQGYFTANSTGIEDDPNVDMDSLGNEHALKALSSGNTLRSRDVEAVQLSEQPQSTDV* # ORIGINAL: g12947.t1 original gene structure, not modified by PASA NODE_468_length_23176_cov_47.2777 AUGUSTUS gene 15118 18866 . + . ID=g12947;Name=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS mRNA 15118 18866 . + . ID=g12947.t1;Parent=g12947;Name=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 15118 15213 . + . ID=g12947.t1.exon1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 15118 15213 . + 0 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 15457 15674 . + . ID=g12947.t1.exon2;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 15457 15674 . + 0 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 15954 16052 . + . ID=g12947.t1.exon3;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 15954 16052 . + 1 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 16329 16464 . + . ID=g12947.t1.exon4;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 16329 16464 . + 1 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 16696 16778 . + . ID=g12947.t1.exon5;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 16696 16778 . + 0 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 17011 17137 . + . ID=g12947.t1.exon6;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 17011 17137 . + 1 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 17317 17396 . + . ID=g12947.t1.exon7;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 17317 17396 . + 0 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 17698 17780 . + . ID=g12947.t1.exon8;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 17698 17780 . + 1 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 17962 18016 . + . ID=g12947.t1.exon9;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 17962 18016 . + 2 ID=cds.g12947.t1;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS exon 18308 18866 . + . ID=g12947.t1.exon10;Parent=g12947.t1 NODE_468_length_23176_cov_47.2777 AUGUSTUS CDS 18308 18866 . + 1 ID=cds.g12947.t1;Parent=g12947.t1 #PROT g12947.t1 g12947 MPSQLEDYEQLDVIGTGSFGKVHKIRRKSDGRTLVWKEIDYGRMSEREKQMLVSEVNILREFRSPHIVRYYDRIIDRERTRVYIVMEFCEGGDLASMIRRHRRDRQFVDESFVWRVCAQVVLALQECHQRKDGAVLHRDLKPANVFLDAAGNVKLGDFGLARVLSERAHFAHTFVGTPFYMSPEQINEAAYNDKSDIWSLGCLLYELCALTPPFDANTQKALAVKISDGRIKRLPSQYSEAMNKVIRQMLQVDHLRRPSIEQMLTVPQLASFFEEQAMQGRSSSLRRKEETLRVREHALEEKERQLLARERSIAKRERQYDERVVRTEELVRDMIRYSVLPSSSPGEMQQHLGRILSVLTGTLLAQPSSASSSQEVHSTGENRNGGVREGSTDGGLSSGERDRDPSDYGRHSNGSYGNDNAAPMHAQAHGGLHMFVRGPVVAAAVPTEKRPPLANANNVNNMANNGAPRLTRVPSGKAINVPSDAVFVRARSNSPTESEKENMRVGRAFRS* # ORIGINAL: g9061.t1 original gene structure, not modified by PASA NODE_2845_length_4991_cov_30.8843 AUGUSTUS gene 2712 4679 . - . ID=g9061;Name=g9061.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS mRNA 2712 4679 . - . ID=g9061.t1;Parent=g9061;Name=g9061.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS exon 3381 4679 . - . ID=g9061.t1.exon1;Parent=g9061.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS CDS 3381 4679 . - 0 ID=cds.g9061.t1;Parent=g9061.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS exon 2712 2999 . - . ID=g9061.t1.exon2;Parent=g9061.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS CDS 2712 2999 . - 0 ID=cds.g9061.t1;Parent=g9061.t1 #PROT g9061.t1 g9061 MPTAPTHAFVGRVDARGAMHADVNRERDPADGDEAPLAIDVRVPTQQCDNDTGCATGAGCTTVAMPTLPGSIGHDDNPAVTIVDHSTLGKGVGGSRAAIALHKGRSAATIDETDSDVAFPLAVLPSPRVPRNAGGPVTHLEPPVGSTKRKNTTTARPSVIAFVRAMRDDAEESQTEEGLLWGRRGWLVATPKSTKDLFKGQYKPPSLRETFIEIASTYSRAIQAGAVMVAYVQIFSAFPTKTCHDGPNDTGSLCRAAWTAYLWRLLFIAVVHSAVYAMGLVCFPLLRQSIAKRAVVPVLVNTVYVTVLYATGQWNDFLFAPTFFPPIVQLYDMLITAARNPMLTQFEESSLSARAFAIRLVLVTIGLAVYARICVRTIVSDSSFGVILTFRIVAHTAVVNVLTLALRRGVATMESLPANRGLTLWYWISISLSMIGRLIMFKSQSIGQAFLMNFLTGLLEIAIRRSYFIRSRWTGALSGKIADILVGLGFKRPSATTKARNLDIYAAHVAAETIVEVQAAVAALVIVR* # ORIGINAL: g9060.t1 original gene structure, not modified by PASA NODE_2845_length_4991_cov_30.8843 AUGUSTUS gene 1 390 . - . ID=g9060;Name=g9060.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS mRNA 1 390 . - . ID=g9060.t1;Parent=g9060;Name=g9060.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS exon 1 390 . - . ID=g9060.t1.exon1;Parent=g9060.t1 NODE_2845_length_4991_cov_30.8843 AUGUSTUS CDS 1 390 . - 0 ID=cds.g9060.t1;Parent=g9060.t1 #PROT g9060.t1 g9060 MPGNSDGRLRNKDVDVVLHTDEQWYLDEAEFFDIMSDADCEDPDIADNVGDLDRRHAQHAEPTLPYTNCITRLTSDDIEHQVDGLEDAAAMSIDIALVDCELRQSGTAVDDANGHLSAAVTAGSCGRTHS # ORIGINAL: g7374.t1 original gene structure, not modified by PASA NODE_588_length_20538_cov_62.0628 AUGUSTUS gene 7403 8897 . + . ID=g7374;Name=g7374.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS mRNA 7403 8897 . + . ID=g7374.t1;Parent=g7374;Name=g7374.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 7403 8545 . + . ID=g7374.t1.exon1;Parent=g7374.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 7403 8545 . + 0 ID=cds.g7374.t1;Parent=g7374.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 8817 8897 . + . ID=g7374.t1.exon2;Parent=g7374.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 8817 8897 . + 0 ID=cds.g7374.t1;Parent=g7374.t1 #PROT g7374.t1 g7374 MAGHDLMADGYFNYGDFPGSNHTTLVLQNDGIHAHLQRTNGGLSSIDAFNGFGSCAGDGMRSIGPISVRTINNGDTRQGLGLSSLSAAHVQPGGVGISGAAMFVTPSSAKGGQQQQQLQQQKQQQQPLLQQQHMARQEQAGQHAQSLAPAKEKARRGPRPGSKRKLSAMTAPEGDMPDEFDHGQLPSIDLGVLDAPAPEEPPARKKRAVIPKRERDMRARLSALEKDQLVNIICTLASKHGIHPADICGELPAVDLEAILERLRRSCEAIYKALPHTRFGSARDDFCYRRCATHVQAFKRAVSDEGKPLVEAGMTDEVIDYCVGAHDVVLMTPVWDSNAKNSSREVAFKALDRFLVNAIKAKGKKVPPEELTAILGKIRAKLANEEESETRFELAIAELNRRLSAST* # PASA_UPDATE: g7372.t1, single gene model update, valid-1, status:[pasa:asmbl_8331,status:12], valid-1 NODE_588_length_20538_cov_62.0628 . gene 187 3624 . + . ID=g7372;Name=g7372.t1 NODE_588_length_20538_cov_62.0628 . mRNA 187 3624 . + . ID=g7372.t1;Parent=g7372;Name=g7372.t1 NODE_588_length_20538_cov_62.0628 . five_prime_UTR 187 187 . + . ID=g7372.t1.utr5p1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 187 292 . + . ID=g7372.t1.exon1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 188 292 . + 0 ID=cds.g7372.t1;Parent=g7372.t1;5_prime_partial=true NODE_588_length_20538_cov_62.0628 . exon 553 666 . + . ID=g7372.t1.exon2;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 553 666 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 913 1035 . + . ID=g7372.t1.exon3;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 913 1035 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 1182 1265 . + . ID=g7372.t1.exon4;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 1182 1265 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 1671 1780 . + . ID=g7372.t1.exon5;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 1671 1780 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 1957 2085 . + . ID=g7372.t1.exon6;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 1957 2085 . + 1 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 2478 2580 . + . ID=g7372.t1.exon7;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 2478 2580 . + 1 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 2858 2944 . + . ID=g7372.t1.exon8;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 2858 2944 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 3123 3203 . + . ID=g7372.t1.exon9;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 3123 3203 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . exon 3393 3624 . + . ID=g7372.t1.exon10;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . CDS 3393 3494 . + 0 ID=cds.g7372.t1;Parent=g7372.t1 NODE_588_length_20538_cov_62.0628 . three_prime_UTR 3495 3624 . + . ID=g7372.t1.utr3p1;Parent=g7372.t1 #PROT g7372.t1 g7372 ILKFVEKVAPIGVYTSGKGSSAAGLTASVVRDAGSRDFYLEGGAMVLADGGVVCVDEFDKMRESDRVAIHEAMEQQTISIAKAGITTILNSRTSVLAAANSIFGRWDDTKDAGENMEFQSTILSRFDMIFIVKDEHDEARDTRVARHVMQVHMNAGQAESAEGDLNIQFLKKFISYCRSRCGPRLSEEAAEKLRNHFVTIRSNTKQLEKDGDRRSTIPITIRQLEAIIRISESLAKMSMTPFATERHVDEAIRLFKVSTLDAAMTGAIEGAEGLVRPETQEEIHKIERQLRHRFPIGATVSERRIIDDFVAKGFKEASVKKVITIMLRRDEIQHRAQKKVLIRLK* # PASA_UPDATE: g7376.t1, single gene model update, valid-1, status:[pasa:asmbl_8330,status:12],[pasa:asmbl_8332,status:12], valid-1 NODE_588_length_20538_cov_62.0628 . gene 14397 17151 . + . ID=g7376;Name=g7376.t1 NODE_588_length_20538_cov_62.0628 . mRNA 14397 17151 . + . ID=g7376.t1;Parent=g7376;Name=g7376.t1 NODE_588_length_20538_cov_62.0628 . exon 14397 14479 . + . ID=g7376.t1.exon1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . CDS 14397 14479 . + 0 ID=cds.g7376.t1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . exon 14819 14915 . + . ID=g7376.t1.exon2;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . CDS 14819 14915 . + 1 ID=cds.g7376.t1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . exon 15401 15526 . + . ID=g7376.t1.exon3;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . CDS 15401 15526 . + 0 ID=cds.g7376.t1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . exon 15784 15835 . + . ID=g7376.t1.exon4;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . CDS 15784 15835 . + 0 ID=cds.g7376.t1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . exon 16223 17151 . + . ID=g7376.t1.exon5;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . CDS 16223 16248 . + 2 ID=cds.g7376.t1;Parent=g7376.t1 NODE_588_length_20538_cov_62.0628 . three_prime_UTR 16249 17151 . + . ID=g7376.t1.utr3p1;Parent=g7376.t1 #PROT g7376.t1 g7376 MLKVAFLRNSTTFPSYDCREANKNTLKMSKAGGQPSNDKLQKTKAEVDEVVGIMKNNVDKVLERDAKLTDLQEKSENLRDGAERFKTTSRKLKRKMWYKNLKFMAILVVAILVLILAIVLWTKPWSK* # PASA_UPDATE: g7373.t1, single gene model update, valid-1, status:[pasa:asmbl_8333,status:3], valid-1 NODE_588_length_20538_cov_62.0628 . gene 3738 6342 . - . ID=g7373;Name=g7373.t1 NODE_588_length_20538_cov_62.0628 . mRNA 3738 6342 . - . ID=g7373.t1;Parent=g7373;Name=g7373.t1 NODE_588_length_20538_cov_62.0628 . five_prime_UTR 6259 6342 . - . ID=g7373.t1.utr5p1;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . five_prime_UTR 5981 6138 . - . ID=g7373.t1.utr5p2;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . five_prime_UTR 5804 5847 . - . ID=g7373.t1.utr5p3;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . exon 6259 6342 . - . ID=g7373.t1.exon1;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . exon 5981 6138 . - . ID=g7373.t1.exon2;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . exon 3738 5847 . - . ID=g7373.t1.exon3;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . CDS 4463 5803 . - 0 ID=cds.g7373.t1;Parent=g7373.t1 NODE_588_length_20538_cov_62.0628 . three_prime_UTR 3738 4462 . - . ID=g7373.t1.utr3p1;Parent=g7373.t1 #PROT g7373.t1 g7373 MACLTDMSYDVFNVDVSYLDYLVDGLSTDMSAPGSPSPLSDTASWESKMSKFDVLTPPLSSCPSPAHAHAASVSFDSLFADVEVDVDVDMTNEDGTPVLSARKAVKSEARDAMWNGMQLASEDDIDSLLTPLATPDGIGAFDFNDEDMAAACDFVEPSKFFPTYFVGDESKISADAPAVVAPSAISMSSTTIKKSAVPPTPAQSPIKSTFSFDAEADEDEDEDEEIDVVTVTESGKRKASPLSTPLRQPPAKRQKTAPTAHIPVVPAKSPNAVISNGVRVPVSAATSAAAMAASARPRSSSGAGAAAKTSSSTASPTGTPMSAAASIAAAAAAAAAATAAASAAATAAMLADMSCSSRNMDTEAKRNTHNVLERKRRNDLKSSFHQLRESIPELEDNERAPKVLILKKAGDYIAVLRQKDAEMEALKERLRAEGRVLQERMRNARA* # PASA_UPDATE: g7375.t1, single gene model update, valid-1, status:[pasa:asmbl_8334,status:3], valid-1 NODE_588_length_20538_cov_62.0628 . gene 9229 13485 . - . ID=g7375;Name=g7375.t1 NODE_588_length_20538_cov_62.0628 . mRNA 9229 13485 . - . ID=g7375.t1;Parent=g7375;Name=g7375.t1 NODE_588_length_20538_cov_62.0628 . five_prime_UTR 13396 13485 . - . ID=g7375.t1.utr5p1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 13354 13485 . - . ID=g7375.t1.exon1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 13354 13395 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 12792 13134 . - . ID=g7375.t1.exon2;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 12792 13134 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 12608 12688 . - . ID=g7375.t1.exon3;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 12608 12688 . - 2 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 11733 12421 . - . ID=g7375.t1.exon4;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 11733 12421 . - 2 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 11421 11555 . - . ID=g7375.t1.exon5;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 11421 11555 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 11024 11219 . - . ID=g7375.t1.exon6;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 11024 11219 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 10821 10912 . - . ID=g7375.t1.exon7;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 10821 10912 . - 2 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 10500 10592 . - . ID=g7375.t1.exon8;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 10500 10592 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 10052 10162 . - . ID=g7375.t1.exon9;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 10052 10162 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 9820 9865 . - . ID=g7375.t1.exon10;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 9820 9865 . - 0 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 9591 9684 . - . ID=g7375.t1.exon11;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 9591 9684 . - 2 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . exon 9229 9349 . - . ID=g7375.t1.exon12;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . CDS 9244 9349 . - 1 ID=cds.g7375.t1;Parent=g7375.t1 NODE_588_length_20538_cov_62.0628 . three_prime_UTR 9229 9243 . - . ID=g7375.t1.utr3p1;Parent=g7375.t1 #PROT g7375.t1 g7375 MSAAAKASEGAQARGHDSDDEFHDASDAPMPGDEVLENVDQSAVDEEEEPTAEDAEAGASSAAPVESVPGASTRAVDAPTTPGSAGGPGARKFGGASTTPFRSPRDGPFYTSFRLERKTRYLVVADVDGRWSLLNSAIRRFGADFVISCGNFGFYDERSADKLSDREVRSRVTQSHLPPTEKNRLLSLSAADLRAAVVQRAMLSDLPSFVVKRDGKQPGESRDGESKDTPQQSQGTPKGKAGARPDAGQLRTFHAPVYTVWGDREDLRVVECFRDGSYSCGNLFLLDHARSHRPAPGIRLFGIGGDFAYTKLFDNGDGEGSVAGAGGRLWVTMLQLGELMDTVTKETAAQRGDGAQDAPEDTKILVTHASPSREPLISLLAALLKADFSLSASTSAGHVLSYSDIAVGDPAEADRRQSHARSEVLALWNQVKDTIAGFCSEEQMRLFKLALRLTEPCPKDALKRLWNVCTSRIDSGHAVLCVDKRGAVGIETCSEGRDLHRRHSEVRDFNKDRLPARQNVRSEDSRDSTPRYDTALLRNLPFTSNEAEIRAFLKGCQVKNVSIGGRRPSEPRGTAIVDFDNHESLTKALKLSNSPLGGRLITVEPHRHEGRLWKPSDGTDSRGSRKQPEGDCRGPASNAQRTGAPAQVRKSGEVCRFFKQGGCRLGDNCPNAHPR* # ORIGINAL: g7377.t1 original gene structure, not modified by PASA NODE_588_length_20538_cov_62.0628 AUGUSTUS gene 17432 19834 . + . ID=g7377;Name=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS mRNA 17432 19834 . + . ID=g7377.t1;Parent=g7377;Name=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 17432 17515 . + . ID=g7377.t1.exon1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 17432 17515 . + 0 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 17644 17760 . + . ID=g7377.t1.exon2;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 17644 17760 . + 0 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 17916 17990 . + . ID=g7377.t1.exon3;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 17916 17990 . + 0 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 18650 18751 . + . ID=g7377.t1.exon4;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 18650 18751 . + 0 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 18947 19095 . + . ID=g7377.t1.exon5;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 18947 19095 . + 0 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 19422 19534 . + . ID=g7377.t1.exon6;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 19422 19534 . + 1 ID=cds.g7377.t1;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS exon 19761 19834 . + . ID=g7377.t1.exon7;Parent=g7377.t1 NODE_588_length_20538_cov_62.0628 AUGUSTUS CDS 19761 19834 . + 2 ID=cds.g7377.t1;Parent=g7377.t1 #PROT g7377.t1 g7377 MMSAETYSSLTPAERHLAVKYEVLRQQKLAAQKKERGGAGENARVSAPDATSNDERRRLAEEALARARFQRQQQQESIDAAPAVNRKRRTNAGSAMVIMPDQTADNPPKRPREDESDDVEIAWWAEARGRGLPNDAATSDACIFVGGVGALSEEEIRTAFSAHGTVTGIRQIAAKDIAFVTFSEVSAADAAVAAMNSKTIEGFVVRVSKARPQDLFNDAEEALRVASTRAKPDSISW* # ORIGINAL: g2245.t1 original gene structure, not modified by PASA NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS gene 310 4016 . + . ID=g2245;Name=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS mRNA 310 4016 . + . ID=g2245.t1;Parent=g2245;Name=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 310 1439 . + . ID=g2245.t1.exon1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 310 1439 . + 0 ID=cds.g2245.t1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 1804 1863 . + . ID=g2245.t1.exon2;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 1804 1863 . + 1 ID=cds.g2245.t1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 2080 2143 . + . ID=g2245.t1.exon3;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 2080 2143 . + 1 ID=cds.g2245.t1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 2380 2672 . + . ID=g2245.t1.exon4;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 2380 2672 . + 0 ID=cds.g2245.t1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 3050 3476 . + . ID=g2245.t1.exon5;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 3050 3476 . + 1 ID=cds.g2245.t1;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS exon 3825 4016 . + . ID=g2245.t1.exon6;Parent=g2245.t1 NODE_3042_length_4467_cov_42.0833_potentialcontaminant AUGUSTUS CDS 3825 4016 . + 0 ID=cds.g2245.t1;Parent=g2245.t1 #PROT g2245.t1 g2245 MISPRRKLRTHANVALALSLFLSLSHLSSALPTPSTTDARRLNPWPDALEVIRAWDEIIHSDTASNAAASSTVIRSPVVLFAFSAASGGASAVLAPTKASFGDKRRSNLPTMEEAVALFLDSEYAASFGISPATRSQLRQINTTVDSLGFAHVAFAQEVSGVLVYGASLYVHFDSSLSFVSAFGIFLADIHVATLTPRLLPRTSASIAIAHAQAEGHVAHPVAMETSLTIFRRMLLSDAFGGGDVLCHRVEIGAPDSPTSLRVVFVDAMSGQIVADYSRVHTLISRRVINMPSGKQSLWTQLYNEGGATPSDARARIAVDTSRDVYNYYGSLSNGTFLSFDGRNRLMLSRLIDTPKIACTYNSDCRQPGSSSSDQTSFDGVQSTYCPSILAEDVAAHEWSHGYTQYASRAGNLVYYAESGAINEALSDIHGETVQLLKSVSSAGNVSAIRGSACVSYLNGSSSARWYIGEELDATVVYKNMFDLSRSYLRDMLHPDCAGDAESTQSPRYYCGTSDSAGVHTNSGVLNRAYALMVDGYNGSRGIGIPMAASIMWRVQKTYTLEFTTFAQMGVAIVAACGDFVKSGAPLNVVTLAGSGAWGSSGGAVVTADDCGIVQAAVNAVRMSVRPCYPLTAVKRLRTTSVGTTTVALAWDSPAGFQVNSASWFKLVVAWGSNTRTFTVSANTKTFSGLTRHTQYRVTVYPVVYKGYQQGPPASIVFTSK* # ORIGINAL: g8810.t1 original gene structure, not modified by PASA NODE_3517_length_3285_cov_36.9555 AUGUSTUS gene 81 1830 . + . ID=g8810;Name=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS mRNA 81 1830 . + . ID=g8810.t1;Parent=g8810;Name=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS exon 81 141 . + . ID=g8810.t1.exon1;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS CDS 81 141 . + 0 ID=cds.g8810.t1;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS exon 460 602 . + . ID=g8810.t1.exon2;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS CDS 460 602 . + 2 ID=cds.g8810.t1;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS exon 731 867 . + . ID=g8810.t1.exon3;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS CDS 731 867 . + 0 ID=cds.g8810.t1;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS exon 1169 1352 . + . ID=g8810.t1.exon4;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS CDS 1169 1352 . + 1 ID=cds.g8810.t1;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS exon 1732 1830 . + . ID=g8810.t1.exon5;Parent=g8810.t1 NODE_3517_length_3285_cov_36.9555 AUGUSTUS CDS 1732 1830 . + 0 ID=cds.g8810.t1;Parent=g8810.t1 #PROT g8810.t1 g8810 LPSLFDTRIVSHLPVAEPCKVAFGEARDLLESLLPRMLEKAVVAVTEQCATHLVAVRGIKAIFRMNKQMPSKPSQYVSALAKPIVSFAQGHGASLPPSLRALWVADISFTIATKFRDVAAEELATVRKTEDSLLKLKRARKGGVTGGDDATGGLAGETERMQRQLALDVDEFVAALEQVGVSREGAAIEALVASVAPPAVTAPAAVL* # ORIGINAL: g6339.t1 original gene structure, not modified by PASA NODE_2705_length_5380_cov_40.6467 AUGUSTUS gene 776 2798 . + . ID=g6339;Name=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS mRNA 776 2798 . + . ID=g6339.t1;Parent=g6339;Name=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 776 784 . + . ID=g6339.t1.exon1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 776 784 . + 0 ID=cds.g6339.t1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 1035 1157 . + . ID=g6339.t1.exon2;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 1035 1157 . + 0 ID=cds.g6339.t1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 1301 1405 . + . ID=g6339.t1.exon3;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 1301 1405 . + 0 ID=cds.g6339.t1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 1707 1805 . + . ID=g6339.t1.exon4;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 1707 1805 . + 0 ID=cds.g6339.t1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 2001 2052 . + . ID=g6339.t1.exon5;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 2001 2052 . + 0 ID=cds.g6339.t1;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS exon 2485 2798 . + . ID=g6339.t1.exon6;Parent=g6339.t1 NODE_2705_length_5380_cov_40.6467 AUGUSTUS CDS 2485 2798 . + 2 ID=cds.g6339.t1;Parent=g6339.t1 #PROT g6339.t1 g6339 MFMGACLDKSLPCIVLELMKRNLSDVFVDESDPFTWDFRLKVARDTALGMAYLHSANPPIFHRDLKPHNILISDIGQVKVSDFGLAQLKVKPKRKASEGSHELSGSLPWMAPENLRGEIFTEACDTYSYGVLLCELTTRCIAYSDHGNLIAAVLIVQVGTGDLRPTVNTENLPNGLHQLITDCIAQEPFVRPLFSEIVTRLVDISPPTTNTGVQMRGDRPTRPPSTVNIAAWS* # PASA_UPDATE: g8777.t1, single gene model update, valid-1, status:[pasa:asmbl_2673,status:12], valid-1 NODE_1801_length_9164_cov_38.3813 . gene 464 5256 . + . ID=g8777;Name=g8777.t1 NODE_1801_length_9164_cov_38.3813 . mRNA 464 5256 . + . ID=g8777.t1;Parent=g8777;Name=g8777.t1 NODE_1801_length_9164_cov_38.3813 . five_prime_UTR 464 511 . + . ID=g8777.t1.utr5p1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 464 736 . + . ID=g8777.t1.exon1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 512 736 . + 0 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 870 965 . + . ID=g8777.t1.exon2;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 870 965 . + 0 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 1180 1324 . + . ID=g8777.t1.exon3;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 1180 1324 . + 0 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 1624 1726 . + . ID=g8777.t1.exon4;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 1624 1726 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 1927 1940 . + . ID=g8777.t1.exon5;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 1927 1940 . + 1 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 2133 2288 . + . ID=g8777.t1.exon6;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 2133 2288 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 2538 2612 . + . ID=g8777.t1.exon7;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 2538 2612 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 2784 2972 . + . ID=g8777.t1.exon8;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 2784 2972 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 3240 3293 . + . ID=g8777.t1.exon9;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 3240 3293 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 3682 3784 . + . ID=g8777.t1.exon10;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 3682 3784 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 4022 4083 . + . ID=g8777.t1.exon11;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 4022 4083 . + 1 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 4399 4506 . + . ID=g8777.t1.exon12;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 4399 4506 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . exon 4986 5256 . + . ID=g8777.t1.exon13;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . CDS 4986 5089 . + 2 ID=cds.g8777.t1;Parent=g8777.t1 NODE_1801_length_9164_cov_38.3813 . three_prime_UTR 5090 5256 . + . ID=g8777.t1.utr3p1;Parent=g8777.t1 #PROT g8777.t1 g8777 MEVDQEELFQPYTGSPALEEADANESTLQTGNYGDDTGDVAPGDAMATGDSGAADDGSAMEVTASTDSADSSQAEILKRLNRIKEYSKQRYSNKMGAFATGFDVTSQEEVGKRQNRAARFGIDVQSVDGDAFTAEVDMQKSRRAQKFGSLSSDVSEVALQNPQDVKKVARAERFGIIPQAAEPAVAEVFKTKVLDVREPPRQPKPDSVIRREALHIYGTDSMSTKDILAFFREYGPSYVEWINDSSCNVVWEDIFSSARVLLRFNDKTVIPRHDPIIEPRLAEASQSGVAGTEDIASAPTDAVVSNAPLPDELQWRKAINPKNGLELLVRLATIEDIKVKNAAERSIYYALHGRNGPGGNRKRRSEEMSHENGDGSEEAEGNRSSKRRRRDFDKSRLGARDQESSDGDRPKALQSRGRLTRLEGRLGARVEPTPVAADAMSAGADVVDWGVDRSQGDGQEIREASDSNSAGMVLGEL* # ORIGINAL: g8778.t1 original gene structure, not modified by PASA NODE_1801_length_9164_cov_38.3813 AUGUSTUS gene 6841 8911 . + . ID=g8778;Name=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS mRNA 6841 8911 . + . ID=g8778.t1;Parent=g8778;Name=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS exon 6841 6985 . + . ID=g8778.t1.exon1;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS CDS 6841 6985 . + 0 ID=cds.g8778.t1;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS exon 7319 7372 . + . ID=g8778.t1.exon2;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS CDS 7319 7372 . + 2 ID=cds.g8778.t1;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS exon 7554 7660 . + . ID=g8778.t1.exon3;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS CDS 7554 7660 . + 2 ID=cds.g8778.t1;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS exon 8048 8245 . + . ID=g8778.t1.exon4;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS CDS 8048 8245 . + 0 ID=cds.g8778.t1;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS exon 8873 8911 . + . ID=g8778.t1.exon5;Parent=g8778.t1 NODE_1801_length_9164_cov_38.3813 AUGUSTUS CDS 8873 8911 . + 0 ID=cds.g8778.t1;Parent=g8778.t1 #PROT g8778.t1 g8778 MRLSWWGQLAKSASHDGEGITTDNVVIPIMDAAGRAGVRVNFHLEPYEGRNLRAVRSDIDYIVSNYGGHVAFYRTSDGLPMYYVYDSYHIATADWGRMLCKESDGGVRGSKLDGVFIGLALNAQSDLRGIERGCFDGVYTYFASAGFTEASDPANWDAIVHWANERGKGMTILAYGHGIA* # ORIGINAL: g1441.t1 original gene structure, not modified by PASA NODE_1825_length_9054_cov_41.0957 AUGUSTUS gene 5032 6787 . - . ID=g1441;Name=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS mRNA 5032 6787 . - . ID=g1441.t1;Parent=g1441;Name=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 6659 6787 . - . ID=g1441.t1.exon1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 6659 6787 . - 0 ID=cds.g1441.t1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 6445 6504 . - . ID=g1441.t1.exon2;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 6445 6504 . - 0 ID=cds.g1441.t1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 6196 6303 . - . ID=g1441.t1.exon3;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 6196 6303 . - 0 ID=cds.g1441.t1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 5734 5852 . - . ID=g1441.t1.exon4;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 5734 5852 . - 0 ID=cds.g1441.t1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 5355 5443 . - . ID=g1441.t1.exon5;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 5355 5443 . - 1 ID=cds.g1441.t1;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS exon 5032 5141 . - . ID=g1441.t1.exon6;Parent=g1441.t1 NODE_1825_length_9054_cov_41.0957 AUGUSTUS CDS 5032 5141 . - 2 ID=cds.g1441.t1;Parent=g1441.t1 #PROT g1441.t1 g1441 MADDDNKHQFKVVLLGEGCVGKTSLVLRYCQNTFNDKHLSTLQASFLTKRLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAVLVYDITDEDSFAKVQNWVKELRKMLGNEIALAIAGNKIDLEKNRTVKREIAEEYAASVGAKHYDTSAKQNKGIEEMFLDLSKRMIAEGDKKKPSERGNNRKSAIIVDDEAPKASGGCC* # PASA_UPDATE: g1440.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2727,status:12], valid-1 # PASA_UPDATE: g1440.t1, single gene model update, valid-1, status:[pasa:asmbl_2726,status:12], valid-1 NODE_1825_length_9054_cov_41.0957 . gene 77 3788 . + . ID=g1440;Name=g1440.t1 NODE_1825_length_9054_cov_41.0957 . mRNA 77 3788 . + . ID=g1440.t1.1.5b6be70a;Parent=g1440;Name=g1440.t1 NODE_1825_length_9054_cov_41.0957 . five_prime_UTR 77 91 . + . ID=g1440.t1.1.5b6be70a.utr5p1;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 77 130 . + . ID=g1440.t1.1.5b6be70a.exon1;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 92 130 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 505 641 . + . ID=g1440.t1.1.5b6be70a.exon2;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 505 641 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 794 1025 . + . ID=g1440.t1.1.5b6be70a.exon3;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 794 1025 . + 1 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 1493 1597 . + . ID=g1440.t1.1.5b6be70a.exon4;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 1493 1597 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 1868 1995 . + . ID=g1440.t1.1.5b6be70a.exon5;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 1868 1995 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 2379 2514 . + . ID=g1440.t1.1.5b6be70a.exon6;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 2379 2514 . + 1 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 2717 2801 . + . ID=g1440.t1.1.5b6be70a.exon7;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 2717 2801 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 3027 3148 . + . ID=g1440.t1.1.5b6be70a.exon8;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 3027 3148 . + 2 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . exon 3500 3788 . + . ID=g1440.t1.1.5b6be70a.exon9;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . CDS 3500 3574 . + 0 ID=cds.g1440.t1.1.5b6be70a;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . three_prime_UTR 3575 3788 . + . ID=g1440.t1.1.5b6be70a.utr3p1;Parent=g1440.t1.1.5b6be70a NODE_1825_length_9054_cov_41.0957 . mRNA 159 3788 . + . ID=g1440.t1;Parent=g1440;Name=g1440.t1 NODE_1825_length_9054_cov_41.0957 . five_prime_UTR 159 567 . + . ID=g1440.t1.utr5p1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 159 641 . + . ID=g1440.t1.exon1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 568 641 . + 0 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 794 1025 . + . ID=g1440.t1.exon2;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 794 1025 . + 1 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 1493 1597 . + . ID=g1440.t1.exon3;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 1493 1597 . + 0 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 1868 1995 . + . ID=g1440.t1.exon4;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 1868 1995 . + 0 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 2379 2514 . + . ID=g1440.t1.exon5;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 2379 2514 . + 1 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 2717 2801 . + . ID=g1440.t1.exon6;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 2717 2801 . + 0 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 3027 3148 . + . ID=g1440.t1.exon7;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 3027 3148 . + 2 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . exon 3500 3788 . + . ID=g1440.t1.exon8;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . CDS 3500 3574 . + 0 ID=cds.g1440.t1;Parent=g1440.t1 NODE_1825_length_9054_cov_41.0957 . three_prime_UTR 3575 3788 . + . ID=g1440.t1.utr3p1;Parent=g1440.t1 #PROT g1440.t1.1.5b6be70a g1440 MALKRMGIVDNYERIRGFTVAVVGVGGVGSVAAEMLTRCGIGKLLLFDYDKVELANMNRLFFKPDQAGLSKVAAAKETLQDINPDVAIDAYNYNITTVENFDHFMNLIKTGSLSGGSVDLVLSCVDNFEARMAINQACNELGQTWFESGVAENAVSGHIQMIIPGETACFACAPPLVVASGIDERTLKKEGVCAASLPTTMGIVAGFLVQNALKYLLNFGQVSRYLGYIALRDFFPNMGMLANPDCDNSQCRIRQREYQERIAAHPKPDVAEVSLEEEAIVHEDEGWGIELVDESVSNPADDVAAASKRANLAEGVQFAFTRPAAQPSATTEGTADAGGASLEELMSKLSGL* #PROT g1440.t1 g1440 MLTRCGIGKLLLFDYDKVELANMNRLFFKPDQAGLSKVAAAKETLQDINPDVAIDAYNYNITTVENFDHFMNLIKTGSLSGGSVDLVLSCVDNFEARMAINQACNELGQTWFESGVAENAVSGHIQMIIPGETACFACAPPLVVASGIDERTLKKEGVCAASLPTTMGIVAGFLVQNALKYLLNFGQVSRYLGYIALRDFFPNMGMLANPDCDNSQCRIRQREYQERIAAHPKPDVAEVSLEEEAIVHEDEGWGIELVDESVSNPADDVAAASKRANLAEGVQFAFTRPAAQPSATTEGTADAGGASLEELMSKLSGL* # ORIGINAL: g10636.t1 original gene structure, not modified by PASA NODE_4178_length_2068_cov_31.8801 AUGUSTUS gene 1519 2023 . + . ID=g10636;Name=g10636.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS mRNA 1519 2023 . + . ID=g10636.t1;Parent=g10636;Name=g10636.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS exon 1519 1578 . + . ID=g10636.t1.exon1;Parent=g10636.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS CDS 1519 1578 . + 0 ID=cds.g10636.t1;Parent=g10636.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS exon 1856 2023 . + . ID=g10636.t1.exon2;Parent=g10636.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS CDS 1856 2023 . + 0 ID=cds.g10636.t1;Parent=g10636.t1 #PROT g10636.t1 g10636 MPSLALVPVSDLFNRARGEEHATGAIGSLADGSHVYVVRLNSNYTINAQVNVAAGGAALLAAPDGRGALSRNLHK* # ORIGINAL: g10635.t1 original gene structure, not modified by PASA NODE_4178_length_2068_cov_31.8801 AUGUSTUS gene 114 875 . + . ID=g10635;Name=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS mRNA 114 875 . + . ID=g10635.t1;Parent=g10635;Name=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS exon 114 207 . + . ID=g10635.t1.exon1;Parent=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS CDS 114 207 . + 0 ID=cds.g10635.t1;Parent=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS exon 429 554 . + . ID=g10635.t1.exon2;Parent=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS CDS 429 554 . + 2 ID=cds.g10635.t1;Parent=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS exon 778 875 . + . ID=g10635.t1.exon3;Parent=g10635.t1 NODE_4178_length_2068_cov_31.8801 AUGUSTUS CDS 778 875 . + 2 ID=cds.g10635.t1;Parent=g10635.t1 #PROT g10635.t1 g10635 AYGVFTSRYILTRSIVLKIPSSAFFTRDNLKGSRLSHLIDKFQVEHNLDAVTQLSLHLAYERANLSSLWAPWIDLLPDRVESTLLWPAGEVDYFQTLPIAGTLRH* # ORIGINAL: g5809.t1 original gene structure, not modified by PASA NODE_440_length_23743_cov_180.18 AUGUSTUS gene 21093 23018 . + . ID=g5809;Name=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS mRNA 21093 23018 . + . ID=g5809.t1;Parent=g5809;Name=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 21093 21753 . + . ID=g5809.t1.exon1;Parent=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 21093 21753 . + 0 ID=cds.g5809.t1;Parent=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 21869 22566 . + . ID=g5809.t1.exon2;Parent=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 21869 22566 . + 2 ID=cds.g5809.t1;Parent=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 22677 23018 . + . ID=g5809.t1.exon3;Parent=g5809.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 22677 23018 . + 0 ID=cds.g5809.t1;Parent=g5809.t1 #PROT g5809.t1 g5809 MGGCASKSDRREDIKVDKVALLQKTPFLICMDEDAMAQFADAFRVTRVPTGVSIYKKNDETEEFYILVDGEVKVSAPDSDNNERQLCVRKGGEFFGEGPLFAGPPEDPPVRRTSSVTTSMQCTFMLLDRDHLERFFKKQSTEARVELRKQMAAVMGQRVDNLLKKTPFLSQENISENKLEVLSSLLKYVTIDANRIVFSEGDIGSELYFVLTGRLRATAKGQDGQPVVLAEFTAGQYFGEISMVVNTPRTATITAAERCLLLSLHRKDLQHFLRLFPEMKHTFDRVAKQRTAEHFKRFKVPFFAAIPEDRYVDLADLSTLEQYLPNTVIFAEGDSGDAFYIVIYGELQVTVTKPDRGAVVLGTMGPGRYFGEIALVKECKRTATVTTLTRCAILTITKENFDKFFVSAPEALADFHIKVAPYNIELKKFIHHPLGLEYFTRHMKKEFSEESISFWKAVNDFKEIAEDNHDALLTKAKEIVQQFVVADAPQTVNLSAAVREKTLTEVASGHVNHNSFHTAHEAILKLMGMDSFQRFKQSQLFQEFVERAQTYGDTIDTSDVKIEMKK* # PASA_UPDATE: g5808.t1, single gene model update, valid-1, status:[pasa:asmbl_7296,status:12], valid-1 NODE_440_length_23743_cov_180.18 . gene 8081 20355 . - . ID=g5808;Name=g5808.t1 NODE_440_length_23743_cov_180.18 . mRNA 8081 20355 . - . ID=g5808.t1;Parent=g5808;Name=g5808.t1 NODE_440_length_23743_cov_180.18 . exon 9069 20355 . - . ID=g5808.t1.exon1;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . CDS 9069 20355 . - 0 ID=cds.g5808.t1;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . exon 8908 8983 . - . ID=g5808.t1.exon2;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . CDS 8908 8983 . - 2 ID=cds.g5808.t1;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . exon 8081 8775 . - . ID=g5808.t1.exon3;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . CDS 8199 8775 . - 1 ID=cds.g5808.t1;Parent=g5808.t1 NODE_440_length_23743_cov_180.18 . three_prime_UTR 8081 8198 . - . ID=g5808.t1.utr3p1;Parent=g5808.t1 #PROT g5808.t1 g5808 MEHTSALPPREPDPLPAPAPASDDSGLEALPLPVPSETVTVTPAASAGWAPLTVRQDELWALDGRRDEISLGVSFVAEITSECDRATVREAFAAIAQRHPCLRTEFRSLAAPEGSPVDAPRVCEQHVREIALLDYSEADVSHLSHSAFVRALEEESRRAVSLPGAHLRVRLFVRAGSAPTLYVWASALVADEWSLAVILEDFCVAYKSGGSIRHLPELSLSYLEHAERLSNATRTEVTRTIEFWENHLSGFGDALDIPVKKPPSALAVETDADSRYSAGRVPFELPRALRRKLESSAKAVGTSVHTILLAAWEVLLFRYTSRDRFICGMSVTGRALAAADIAVGPFSSMLLVPCEMGGNPLFSQLASLMSDQLGEIMAHQGIPLTRLVRMVPALAAERGLEAQFVHRSGDAFRQDGGMLFLLPNTAPGTEVEAGGLTFRSIDACIRRSALAEIKLELFEFKDQLLGCFAFRSTHYEEEAVARMARHYLELLASIGDDVNRNISAFRLMDDAELSLIQSWCTLPFTFPEDKCVHDLFAQVVAEHPAQVAVEEGAETLSFAALDVASNRVANLLVGAGIVPGELVAILLPRCLQIPVAALGVVKAGAAYMPIDPGYPASRVQFMLEDSKSRVLLTSTRVDASLVQAAPASTRVVYLDTDPDGAVASCAATNPNVTVPSESLLCVIYTSGSTGKPKGVELHHKGFVNYVLWHLKTYGMGARDRCAMLASPAFDAGASELWSSLCGGLTLVAVDDNSRVLPEALVKWLCDAHICICFMPTPLAERVLKLPWPASAALRVLYTGGDRLHKGASGPVPFRLVNIYGPTETTVNVTYCDVPPGQDNPPIGGAWANALLLVLSADKSLVPVGVPGELYIGGVGVARGYFGRADLTQQRFLNAYAHFEYTTGRVTLGGRTYRTGDLVRWRPDGTLEFIARMDGQVKIRGYRVELGEIEVALAEHPTVSEACCVVESDPRNNEKRIVAYVVPLQGGDISVRQLRDHAKVRLPEYMVPYVIMKIRAMPLTGTGKINRMGLPKVNWQDSRVLDRTLIAPRDKTEQALADIFADVLGLDAMSITDNFFELGGHSLSAAQVVTRVKDRFGFDMSYDALFREPTVARLAAYVARRQAAGTVAEDALPAARSAGSVAQGLQGGWGASTESPTGSLSVACSYLNLPVERRPGTVHAMSMNQQSLWYLSNIDGDSQSSVAYNILFAVRLSTRSGDKVDVVALRKSFEMLLRRHPVLRTVYRADHDGQPVQRVDEKARLDMELLNGRTWSDEELEAYLHRETHKPFDLANGPIMRLRLVDTAGGIVLIWTAHHIAVDLWSYSILFDELSVMYDHFRLGGPGDIAELQELATTYADFSNWQRTLMTGNHGAKLLHYWTRRLADCPRFLNLPTDHTRPSVQGYTGKTMFFRVPPEVWATVSSIGKSEGMTSFVVLIGCYFVLMHRYSGQDDIVIGTPMACRRKREFEDVVGYFVNSVPIRASLAGNPSFSNFLKRLQRVVLSALAHQDCPFPEVVRAVEQGRDASHHPIFQSMFVLETSQKVSERQLAPILLGEGGQRMELGSLVLESMKIEKTTAQMDVTMLMAENDEGGLLGCFQYNSELFEPSTIDGMAEHFVALLSNVASQCDAKISDLTLISPRELGMITGEWTATTAPYDETQPIHSVVENVCTMHPRLIAVAAEDVDEGRRITMTYADLSLNSNRIANLLMRNGVGSGEVVAVLLPRCAYIPMATLGVIKTGAAYMPIDPSYPAARVQFMLEDSKSRVVLTISRVDRALLATVPPSVKVVFLDTDPGRAVEMAPGNLPTVPVSIDALLCVIYTSGSTGKPKGVQLTHRNFANYVAWHVKTYGMRLGDRCSMLASPAFDGAASELWSSLCTGMMLIAVDENSRVVPEALVKWLIAQRVNICFMPTPLAERVLKIPWPKTAPLRVLYTGGDRLHKGASEPVPFRLVNIYGPTEATVNVTYCEVPPGQDNPPVGGPVANVRLYVLDRSRRPVPVGITGELYVAGVCLSRGYYGRDDLTQAAFMTIDIPVDPSGRVVTERVYKTGDFVRWRADGKLDFVSRIDNQIKLRGFRVELGEIESVMEECPLVAECVVVPVDDPKGEKRLVGYFVPRFARPPASPAAATSNSAGVASPPDAASGMPSVLPAAEEAQEQLRVYLQEKMPEYMVPSFLVAMSALPLSGNGKVDKRALPAVDWNKIGASVYEEPKTPVQKSLAAIFAEVLAVDRVGLSDDFFELGGHSLLIAQVISRVRSIFGVELGYKAVFQSRTVALLAEKIEHFLRSLGPEATVVSLHATPGSSVKTSAVSSTPRAQQGQPAQQAQASQPAATPTRGRNGSFAGDMFDRVPVAEQLQPPQSSKLSRMLAGDKAPSSASPSSAVPVQLQRRMSAQGSALTAHQMYQQSIAPPQLAPTSTIPEGVAASLSRDASQSHVVRLFGGSVSSSGQEGAASGGISYSVAGLGERMSVDSRTLAQAVPAGGSYPLSYNQRSLWFVYKLQSPEEQASYHVISGRIFLEELDETRALEAVRAIVRRNQQLRAYFGEDDGVPYQRVSTSLSVDFAVSDAMDVPDAALKTIVHADVHKPFFVSSPERPLLRVRMYRRPAKRTLVVFVGPHICLDGWSLDILWDEFNVAYIDGGAALGPKPMQYADFVHWQTKLMDGEDGKRLQRFWKRSLANVTVLNMPSDKPRPPVQTYNGAAIAVEIPAALADRLRAVAAAEQVTMFPLLLSAFFAMMYRYTAQEDIAIGFPVAGRSMLEFERIIGHFANVLVLRTRVSAAVAFSSLLADVQEALIDALSNQDMPFASLVEAMQTHRDPSRSPLAQALFALQRRHRYVAKSRPERELLCESYEVEQEGSPLDLSLIVEDDATNTVRCISLRYNTDLFTVQFAQSMCAHYLRVLESVCADPLRTVGALQILAPAEHRRIVVEWNDTALPGVPTETVAAIVERHARERPAALALASRTGRLTYAEMDRRSSCIARYVLASMSDQWRVGPQCVVAVFLKRSLDLLVSALAAHKAGAAYLFIDPKLPAKRVEFQLTNAAVPVVVTHSELLPLLPPGNFVTVLVDKPIPPVHDGPGGPVAGAPVRGLTDLAYVVYTSGSTGTPKGVCIEHRNLLNMVTWAIREYNFGTGDVGAQMIGQSFDPINMEVWPLLVAGGGLYIIDDDERLSSSSTVRAFAAGNVTFAIAPTAMAEYILEELPSETSMRTLVAGGEKMQRGLNAPRPSLRYDNLYGPAECTVLSTYYRVGVESEPPPIGKPIGNARVYVLDPQRSPVPVSIPGELYIAGAGVGRGYLGRNDLTARAFVDVEIVVDAASKRIVKERLYKTGDLVRWRRDGNLEFLGRADNQIKLRGFRIELDEIETVVCKHPAVAECVVLVREEPATKDKRLVGYYVCKGGASLTTEALRSFILESLPEYMLPSALIALDEFPLTPNGKVDRQALPEPDWAAVAGSRGAGRELLAPRTELEQRVADLFGEILGSKQFGILDSFFALGGHSLAASRLVARLKKMLGVEIPVSVLYEQATVAGLAESLATRAPALKKLHEVPGGVRTGESLAQQMLARMLKEDSTLDAALVVAHGAAARPLDSNQCRLLLTGASGFVGAFLLKELLLRTEAQVYCIVRCKDEADGMAKLRANMSGYGLLTPEVDAMVEQRVFSLPGDLAKPQLGVLSATYKSLCETIDAVVHNGSLVNFLLPYEGPMRDSNALGTAAVVRLCMTTRAKPLHYVSTMSVFPASTRNKVESFAEERLHDAVERLGSGYAKSKWVAEKLVAQASERGLPVAVYRLGRVMGSVETGACSTLDFLYAFLKGCLQIRAFPDLNWLVDPVPVDFVASAIATVMALGSARMRREDGQPLTLHLRAPSHLALSQFVAMVKATEPSYQTNIAQLPYGEWRARLLAAIEAPLTEGSAGAAEDNALRLFSPLFTAELEELVDSDIACERTVRLLTTLGARFPAVDQQLVNTYVQWLWKVGFFPRTIA* # PASA_UPDATE: g5806.t1, single gene model update, valid-1, status:[pasa:asmbl_7295,status:12], valid-1 # ORIGINAL: g5806.t2 original gene structure, not modified by PASA NODE_440_length_23743_cov_180.18 . gene 40 2765 . - . ID=g5806;Name=g5806.t1 NODE_440_length_23743_cov_180.18 . mRNA 40 2765 . - . ID=g5806.t1;Parent=g5806;Name=g5806.t1 NODE_440_length_23743_cov_180.18 . five_prime_UTR 2759 2765 . - . ID=g5806.t1.utr5p1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 2398 2765 . - . ID=g5806.t1.exon1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . CDS 2398 2758 . - 0 ID=cds.g5806.t1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 2086 2241 . - . ID=g5806.t1.exon2;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . CDS 2086 2241 . - 2 ID=cds.g5806.t1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 1412 1883 . - . ID=g5806.t1.exon3;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . CDS 1412 1883 . - 2 ID=cds.g5806.t1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 1041 1128 . - . ID=g5806.t1.exon4;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . CDS 1041 1128 . - 1 ID=cds.g5806.t1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 40 877 . - . ID=g5806.t1.exon5;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . CDS 659 877 . - 0 ID=cds.g5806.t1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . three_prime_UTR 40 658 . - . ID=g5806.t1.utr3p1;Parent=g5806.t1 NODE_440_length_23743_cov_180.18 . mRNA 659 2554 . - . ID=g5806.t2;Parent=g5806;Name=g5806.t1 NODE_440_length_23743_cov_180.18 . exon 2398 2554 . - . ID=g5806.t2.exon1;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . CDS 2398 2554 . - 0 ID=cds.g5806.t2;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . exon 2086 2241 . - . ID=g5806.t2.exon2;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . CDS 2086 2241 . - 2 ID=cds.g5806.t2;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . exon 1412 1883 . - . ID=g5806.t2.exon3;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . CDS 1412 1883 . - 2 ID=cds.g5806.t2;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . exon 1041 1134 . - . ID=g5806.t2.exon4;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . CDS 1041 1134 . - 1 ID=cds.g5806.t2;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . exon 659 877 . - . ID=g5806.t2.exon5;Parent=g5806.t2 NODE_440_length_23743_cov_180.18 . CDS 659 877 . - 0 ID=cds.g5806.t2;Parent=g5806.t2 #PROT g5806.t1 g5806 MERQTRSSSARGTLVRAHVPAVPAGASVDVLSGTAELRTQQSSDPAAAFRAISASSENVVTHPQPAVVMHPTPIAATTPINLHTTSPPPLNSNSAANVNRPMSEPSPNAGQVHSSQAEVRGHSESTASAENVQSGRGRRGRGGASRPGSDSSHVHRRGRAPGAVGYSIDEVRYILQTMERLLPAGPIEWDRVQDALRTEADKRGWKERDVDSIKHKFYKLRDEYETGNPMMTAENTLARRIQHLIDNKCDTRHLDDSWWGEGGAERRHSNGSDSDDAWDRQEQQQGDDAGDTMEESRADVPDDSGRGVSAMSVAEEVNMRAGKRKATDDGGAATPAKDNPTSQSAKKRNVIQTLEGFSTVLSQSIEARAKRWEAKDAAANPGPNPLVTIGAMFSDAVKELGASNERLINNFTAAQERQFEMMMQFLAEKRK* #PROT g5806.t2 g5806 MHPTPIAATTPINLHTTSPPPLNSNSAANVNRPMSEPSPNAGQVHSSQAEVRGHSESTASAENVQSGRGRRGRGGASRPGSDSSHVHRRGRAPGAVGYSIDEVRYILQTMERLLPAGPIEWDRVQDALRTEADKRGWKERDVDSIKHKFYKLRDEYETGNPMMTAENTLARRIQHLIDNKCDTRHLDDSWWGEGGAERRHSNGSDSDDAWDRQEQQQGDDAGDTMEESRADVPDDSGRGVSAMSVAEEVNMRAGKRKATDDGNSGAATPAKDNPTSQSAKKRNVIQTLEGFSTVLSQSIEARAKRWEAKDAAANPGPNPLVTIGAMFSDAVKELGASNERLINNFTAAQERQFEMMMQFLAEKRK* # ORIGINAL: g5805.t1 original gene structure, not modified by PASA NODE_440_length_23743_cov_180.18 . gene 169 588 . + . ID=g5805;Name=g5805.t1 NODE_440_length_23743_cov_180.18 . mRNA 169 588 . + . ID=g5805.t1;Parent=g5805;Name=g5805.t1 NODE_440_length_23743_cov_180.18 . five_prime_UTR 169 170 . + . ID=g5805.t1.utr5p1;Parent=g5805.t1 NODE_440_length_23743_cov_180.18 . exon 169 588 . + . ID=g5805.t1.exon1;Parent=g5805.t1 NODE_440_length_23743_cov_180.18 . CDS 171 521 . + 0 ID=cds.g5805.t1;Parent=g5805.t1 NODE_440_length_23743_cov_180.18 . three_prime_UTR 522 588 . + . ID=g5805.t1.utr3p1;Parent=g5805.t1 #PROT g5805.t1 g5805 ELEAFLPPPSEVDPDLVRKAILSVRQSAEWGMRSVQGPFQRLVVPLPREADRRALIIETVVRLTNFRARHMAPRVGGNQLQTVYSPGYEECVTSGGLKYTELFSRKFLATAETRKR* # ORIGINAL: g5807.t2 original gene structure, not modified by PASA # ORIGINAL: g5807.t1 original gene structure, not modified by PASA NODE_440_length_23743_cov_180.18 AUGUSTUS gene 3334 7904 . + . ID=g5807;Name=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS mRNA 3334 7904 . + . ID=g5807.t2;Parent=g5807;Name=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3334 3499 . + . ID=g5807.t2.exon1;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3334 3499 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3673 3712 . + . ID=g5807.t2.exon2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3673 3712 . + 2 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3856 4419 . + . ID=g5807.t2.exon3;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3856 4419 . + 1 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 4548 4992 . + . ID=g5807.t2.exon4;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 4548 4992 . + 1 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 5209 5742 . + . ID=g5807.t2.exon5;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 5209 5742 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 5897 6040 . + . ID=g5807.t2.exon6;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 5897 6040 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 6160 6429 . + . ID=g5807.t2.exon7;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 6160 6429 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 6599 7187 . + . ID=g5807.t2.exon8;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 6599 7187 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 7602 7639 . + . ID=g5807.t2.exon9;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 7602 7639 . + 2 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 7764 7904 . + . ID=g5807.t2.exon10;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 7764 7904 . + 0 ID=cds.g5807.t2;Parent=g5807.t2 NODE_440_length_23743_cov_180.18 AUGUSTUS mRNA 3334 6821 . + . ID=g5807.t1;Parent=g5807;Name=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3334 3499 . + . ID=g5807.t1.exon1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3334 3499 . + 0 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3673 3712 . + . ID=g5807.t1.exon2;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3673 3712 . + 2 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 3856 4419 . + . ID=g5807.t1.exon3;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 3856 4419 . + 1 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 4548 4992 . + . ID=g5807.t1.exon4;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 4548 4992 . + 1 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 5209 5742 . + . ID=g5807.t1.exon5;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 5209 5742 . + 0 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 5897 6040 . + . ID=g5807.t1.exon6;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 5897 6040 . + 0 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 6160 6429 . + . ID=g5807.t1.exon7;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 6160 6429 . + 0 ID=cds.g5807.t1;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS exon 6599 6821 . + . ID=g5807.t1.exon8;Parent=g5807.t1 NODE_440_length_23743_cov_180.18 AUGUSTUS CDS 6599 6821 . + 0 ID=cds.g5807.t1;Parent=g5807.t1 #PROT g5807.t2 g5807 MAPPRRNRAEGIDAGEKSAATLFVRNLSFDTSNEQLESFFSDVAPVKKAFVVTEPGERAKCRGFGFVHFALKEDAGRAVHVLAGRKLNGRILKIEIANKRASHDERQRGRDAKGPHGYGKDGASGDVGEGGGFGGDGEDDDAFVPTATVGGGARPAHDAVGGSAADAVRLAKRKAAPARAVDRDDGEGERTGPAAEEGKVGVDADDAAVVDGGADEKTTDVDMDANAAGKDASDATGDESEARMRKPKSQRAKPVSAEGRTVVISGLPAGIAVKAVYKRCRKIGAVEKTDVHASPDGPESCAAHVVFASHKDARKALAALDGHVLKGKKVSASLLTRLGKAPNSKSLKRSRVIVRNLPFKADKDGVTTAFGSFGKVLDVTLPCNDAGKPKGFAFVQYGNVFEAAKAIESMNGKALLGRPVAVDWAVAKSQYEKAALVAPAEAEKETRGDVDGDEVEGESEEHDDGDDDGDDDGNDDGDDDGDDDGNDDDDDTMDDDAKEDAAAKTKKTYDDVGTGCTVFVRNVSYDSAEEDLQEAFEHFGRVSLCLLVVDRDTGLPRGTAFIKFARREDADSCIEAARVLEEKSADPLFDPIVSADSPLVVDGRKLSVTRAVDRNEASKLTETKKKEREDKKDNRNMYLAREGHIAPGSDAAAGVSESDMAKRERAQKEKNEKLRNPNFIVSTTRLSVRNLPTFVDDAGLRKLFFDAARKSGVRGHVRVKSAKIMRDRERAAVDTNGRSLGFGFVEFEEHEHALAALRGVNNNPELYGSDKRPIVEFSVENRAALQRKAERLEHSRANLHRGNAAKDGELKAKDSKKPEQGKDSKKPEKGKDSKKPEKGKDVQKGPPHSDDGNVTAENASAADEGASAGEKHTKTKKAKKGDKKAKAAAADAQLPADGVVKPSEESTEQRHKHAPINAEGTGKRKRDFDADDAPAKKGRRIDSEARDEAKFANLVDKYRKRLVQGGDREATQRWFE* #PROT g5807.t1 g5807 MAPPRRNRAEGIDAGEKSAATLFVRNLSFDTSNEQLESFFSDVAPVKKAFVVTEPGERAKCRGFGFVHFALKEDAGRAVHVLAGRKLNGRILKIEIANKRASHDERQRGRDAKGPHGYGKDGASGDVGEGGGFGGDGEDDDAFVPTATVGGGARPAHDAVGGSAADAVRLAKRKAAPARAVDRDDGEGERTGPAAEEGKVGVDADDAAVVDGGADEKTTDVDMDANAAGKDASDATGDESEARMRKPKSQRAKPVSAEGRTVVISGLPAGIAVKAVYKRCRKIGAVEKTDVHASPDGPESCAAHVVFASHKDARKALAALDGHVLKGKKVSASLLTRLGKAPNSKSLKRSRVIVRNLPFKADKDGVTTAFGSFGKVLDVTLPCNDAGKPKGFAFVQYGNVFEAAKAIESMNGKALLGRPVAVDWAVAKSQYEKAALVAPAEAEKETRGDVDGDEVEGESEEHDDGDDDGDDDGNDDGDDDGDDDGNDDDDDTMDDDAKEDAAAKTKKTYDDVGTGCTVFVRNVSYDSAEEDLQEAFEHFGRVSLCLLVVDRDTGLPRGTAFIKFARREDADSCIEAARVLEEKSADPLFDPIVSADSPLVVDGRKLSVTRAVDRNEASKLTETKKKEREDKKDNRNMYLAREGHIAPGSDAAAGVSESDMAKRERAQKEKNEKLRNPNFIVSTTRLSVRNLPTFVDDAGLRKLFFDAARKSGVRGHVRVKSAKIMRDRERAAVDTNGRSLGFGFVEFEEHEHALAALRGVNNNPELYGSDKRPIVEFSVENRAALQRKAERLEHS # ORIGINAL: g3443.t1 original gene structure, not modified by PASA NODE_3005_length_4548_cov_41.9059 AUGUSTUS gene 325 3915 . + . ID=g3443;Name=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS mRNA 325 3915 . + . ID=g3443.t1;Parent=g3443;Name=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 325 488 . + . ID=g3443.t1.exon1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 325 488 . + 2 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 636 931 . + . ID=g3443.t1.exon2;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 636 931 . + 0 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 1292 1414 . + . ID=g3443.t1.exon3;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 1292 1414 . + 1 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 1607 1691 . + . ID=g3443.t1.exon4;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 1607 1691 . + 1 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 1856 1946 . + . ID=g3443.t1.exon5;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 1856 1946 . + 0 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 2342 2530 . + . ID=g3443.t1.exon6;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 2342 2530 . + 2 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 3054 3179 . + . ID=g3443.t1.exon7;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 3054 3179 . + 2 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 3472 3584 . + . ID=g3443.t1.exon8;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 3472 3584 . + 2 ID=cds.g3443.t1;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS exon 3763 3915 . + . ID=g3443.t1.exon9;Parent=g3443.t1 NODE_3005_length_4548_cov_41.9059 AUGUSTUS CDS 3763 3915 . + 0 ID=cds.g3443.t1;Parent=g3443.t1 #PROT g3443.t1 g3443 LELTADLPSDETLDRWLGEPIKVVVLPTSIFITNGKGFPVLSKRHQAFVRKLMKLEVQFVLSGTAGHPSGDSAFKGYLDHMHKTRPAPDTVQEFARGYEDYLQAPLQPLMDNLESQTYEVFERDPIKYSQYEKAVYKALLDRVPPEMKALKTTVVMVVGAGRGPLVAAALSAAQKAGRRIRVYAVEKNPNAVTTLRTRRNEEWGDQVTIVACDMREWNAPEKAEILISELLGSFGDNELSPECLDGAQKFLAADGISIPLNYTSFVAPVTSAKLHNEVRAFNDLAHSETPYVVMLRNVHLIAQPLPCFVFSHPNPDVERGTVDNTRYAVLEFVADESATMHGFAGYFESVLYDDVIISINPATYSEGMFSWFPIFFPFKASADILCIIFLWCALFAPMYVPKGSRIAIHVWRCQSRTKVWYEWAVASPSLSAIHNPHGRSYNIGL* # ORIGINAL: g11094.t1 original gene structure, not modified by PASA NODE_3967_length_2430_cov_36.7248 AUGUSTUS gene 187 2275 . - . ID=g11094;Name=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS mRNA 187 2275 . - . ID=g11094.t1;Parent=g11094;Name=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS exon 2255 2275 . - . ID=g11094.t1.exon1;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS CDS 2255 2275 . - 0 ID=cds.g11094.t1;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS exon 1800 1933 . - . ID=g11094.t1.exon2;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS CDS 1800 1933 . - 0 ID=cds.g11094.t1;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS exon 1141 1357 . - . ID=g11094.t1.exon3;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS CDS 1141 1357 . - 1 ID=cds.g11094.t1;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS exon 187 809 . - . ID=g11094.t1.exon4;Parent=g11094.t1 NODE_3967_length_2430_cov_36.7248 AUGUSTUS CDS 187 809 . - 0 ID=cds.g11094.t1;Parent=g11094.t1 #PROT g11094.t1 g11094 MSLNKKKVTPANVPRYIVHVSFDSVDVCLDEDQYADVRGLLLTLKRYQRREKYQRFRPSVPVTGNARLWFRFAAECVVNDILTKGSHWSPKRLTARRADRMAYVDAYIKRLLEKSDGQTKAQLEALEDRLAFEDIRYYRSLAIAKVKSEKALAAIVKKARSEAKKKAAPAAAPDAGPRDSQASSGSWSGWVRNLVGSGGTKPKLEKSASRDSLGTSLSTDDLPSAGDLSAVMQASDAAIAADLDLDQPPPSPTKSPFLLNIVVENGSCALLGSRRENGESGKSEGPALLPFVELQFSTVLVQMSRTGGVVGMSFLASLGNLCLVDRTMDDD # ORIGINAL: g5630.t1 original gene structure, not modified by PASA NODE_1495_length_10949_cov_39.1377 AUGUSTUS gene 7201 10507 . - . ID=g5630;Name=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS mRNA 7201 10507 . - . ID=g5630.t1;Parent=g5630;Name=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 10100 10507 . - . ID=g5630.t1.exon1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 10100 10507 . - 0 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 9485 9572 . - . ID=g5630.t1.exon2;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 9485 9572 . - 0 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 8904 9058 . - . ID=g5630.t1.exon3;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 8904 9058 . - 2 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 8388 8673 . - . ID=g5630.t1.exon4;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 8388 8673 . - 0 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 7944 8021 . - . ID=g5630.t1.exon5;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 7944 8021 . - 2 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 7638 7742 . - . ID=g5630.t1.exon6;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 7638 7742 . - 2 ID=cds.g5630.t1;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 7201 7292 . - . ID=g5630.t1.exon7;Parent=g5630.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 7201 7292 . - 2 ID=cds.g5630.t1;Parent=g5630.t1 #PROT g5630.t1 g5630 LGRKKAALVQRLDSLNARTIGSIFRETDGQGWTTLAANLSHNTHDNASSAVGKGAFGGITEPAAPGDGRVSRATPVAVGGPTGVALLRPTAQLTSQSQSTAHTHAAADGVGSFSVSVRDRLAKDVCGSARQRKVHEVNIAYRLAGKTAFTVDERRVGIRFDTSYNGEYYERYYIILEFSESSVETDGATRLSVFKHTLPHFIPLEELKKTHLNTDVKVFLEHIEDYLGAFVARRQQALSLSLNFAGTAGDPFGSSGTQAVACVRKSTVQCTPGVDLVEFSVDIPPSHRHAVNAVDAPDVGDGQNAASNTDSDDEIVSSKRVFQSRRPGRPAKRQRTDAGNARDRPRIAKVRLLFEDLLQSLPTQASVSLHSAAGQNDRGKRLSSVEALFLSKKIPDAFAEGFR* # PASA_UPDATE: g5629.t1, single gene model update, valid-1, status:[pasa:asmbl_1768,status:3], valid-1 NODE_1495_length_10949_cov_39.1377 . gene 5014 7096 . + . ID=g5629;Name=g5629.t1 NODE_1495_length_10949_cov_39.1377 . mRNA 5014 7096 . + . ID=g5629.t1;Parent=g5629;Name=g5629.t1 NODE_1495_length_10949_cov_39.1377 . five_prime_UTR 5014 5153 . + . ID=g5629.t1.utr5p1;Parent=g5629.t1 NODE_1495_length_10949_cov_39.1377 . exon 5014 5855 . + . ID=g5629.t1.exon1;Parent=g5629.t1 NODE_1495_length_10949_cov_39.1377 . CDS 5154 5855 . + 0 ID=cds.g5629.t1;Parent=g5629.t1 NODE_1495_length_10949_cov_39.1377 . exon 6223 7096 . + . ID=g5629.t1.exon2;Parent=g5629.t1 NODE_1495_length_10949_cov_39.1377 . CDS 6223 6777 . + 0 ID=cds.g5629.t1;Parent=g5629.t1 NODE_1495_length_10949_cov_39.1377 . three_prime_UTR 6778 7096 . + . ID=g5629.t1.utr3p1;Parent=g5629.t1 #PROT g5629.t1 g5629 MGSSSSDDPTSFIKPYSRERTHSQGLRVEAEDAITSSSDRRQSQGRPSFSRDAPVRVRHKDEASILKDAVLWDADVVIGCILFDAVSNPSSMVPSNADLAEEEVDADVLHYAWNDPLVPAAAGRFMSGVRTALTATKIAINNSDARKMFARVIEFIIAIAIFTIASLWGARLGLRVLVWLLSLVGIGPAIVDDGESDILGFGVSVLPFLSVLFLRYIFYSPLDLMFLAVLRDPKLGPGGSRLASSLQKRDFRGMTSYAMDALLRYARYFALASTVFIVGRIPFVGGLALGLIELMMFKRTFGWRIALLIAGVTAIPFTRPLVMGLLETWFAARALGRELIEPYGGRAFRGVFGSGRTAFMKTHGAAIVGFALPFALLLRVPVAGPLFFVVAQAAAPTLVLSLLIAEEQSVAPGAAKAK* # ORIGINAL: g5628.t1 original gene structure, not modified by PASA NODE_1495_length_10949_cov_39.1377 AUGUSTUS gene 135 1986 . - . ID=g5628;Name=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS mRNA 135 1986 . - . ID=g5628.t1;Parent=g5628;Name=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 1872 1986 . - . ID=g5628.t1.exon1;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 1872 1986 . - 0 ID=cds.g5628.t1;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 1125 1448 . - . ID=g5628.t1.exon2;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 1125 1448 . - 2 ID=cds.g5628.t1;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 487 810 . - . ID=g5628.t1.exon3;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 487 810 . - 2 ID=cds.g5628.t1;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS exon 135 239 . - . ID=g5628.t1.exon4;Parent=g5628.t1 NODE_1495_length_10949_cov_39.1377 AUGUSTUS CDS 135 239 . - 2 ID=cds.g5628.t1;Parent=g5628.t1 #PROT g5628.t1 g5628 MASHRARIVQPSSRPFVARDSSVVVVAFVLLAMTTCVQAQRNISVITTTASQLVVGWLVDGVVDPAVTAVVLSAHVEDDPSPSAGTIFGSIPTGAGIVQSAVSFFSSVLSGLEPGTPYLVSVALCAAANTSSCQTPTVAQSPFVTNGIRRLSNVTSVVSSNTTVSVSWTVLSTGVTPMLVLIAVAEVTSPGTYNATLASTLDYTVAHPSSVATNVSSVAIDGLGPGTAYVVRVTACTTLTICSLHSYSSMTTTTGTKFTVLRLGGLFQTNVGAIPAGNGYQAGTRAMYF # ORIGINAL: g2605.t1 original gene structure, not modified by PASA NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS gene 350 2189 . + . ID=g2605;Name=g2605.t1 NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS mRNA 350 2189 . + . ID=g2605.t1;Parent=g2605;Name=g2605.t1 NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS exon 350 1867 . + . ID=g2605.t1.exon1;Parent=g2605.t1 NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS CDS 350 1867 . + 0 ID=cds.g2605.t1;Parent=g2605.t1 NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS exon 2151 2189 . + . ID=g2605.t1.exon2;Parent=g2605.t1 NODE_3162_length_4144_cov_18.8105_potentialcontaminant AUGUSTUS CDS 2151 2189 . + 0 ID=cds.g2605.t1;Parent=g2605.t1 #PROT g2605.t1 g2605 MGLLRACLLIALCLHFAGSASAQLYYFSIWTSTANSDSYTSGKVGFTLYGSDTTSSTYSLPSISTRSVNTTVSASNVGTLLALGITPNSDNWRPERIVVTYKTDTYLFKFAATDSLSSTATTPTQVNVCAVPQSPPNGAFDCASTYSKGAANTCVLACNSGYVPSSSATGACPATNAWTITYSNADAQCVSCAPAVSCASLNRQTCRGVLPNVCGPCKSSYGVTGDTVASTSDLNVMCTTFITYTIMLLMSVASGAATDLPCTLSMFGTNGYQLDDPVSLNDPSTGGLSLGKTYTYTVQSVFFGYEAVRGLKITCDYKTKFTLNPWLPSYIEVSSDDARLGGATLRYNFLNTDRLDYGTWLLFAPPPSGTPANGKITCTSSFPGSTCAIKCDTNYAAAGGNGTSGVMLPSGSAFPFSTASVDSATCVIDCSTRNNTYCASLNRQPCGAVSSTCGPCMDGFNTSSRTGSIPGDTTCVQFATYDVEISTGKTTFSGPFYMTIFGDLGSEHFTENISERIS* # ORIGINAL: g3068.t1 original gene structure, not modified by PASA NODE_5363_length_888_cov_29.5683_potentialcontaminant AUGUSTUS gene 1 247 . - . ID=g3068;Name=g3068.t1 NODE_5363_length_888_cov_29.5683_potentialcontaminant AUGUSTUS mRNA 1 247 . - . ID=g3068.t1;Parent=g3068;Name=g3068.t1 NODE_5363_length_888_cov_29.5683_potentialcontaminant AUGUSTUS exon 1 247 . - . ID=g3068.t1.exon1;Parent=g3068.t1 NODE_5363_length_888_cov_29.5683_potentialcontaminant AUGUSTUS CDS 1 247 . - 0 ID=cds.g3068.t1;Parent=g3068.t1 #PROT g3068.t1 g3068 MKELIVVGLLAATAVATSDYESMFKAFKATHLKAYANEAEEAKRFKLFVENMKMAEVLQAANPHASFGANAFADISAAEFKS # ORIGINAL: g13708.t1 original gene structure, not modified by PASA NODE_5721_length_740_cov_33.2391 AUGUSTUS gene 483 659 . + . ID=g13708;Name=g13708.t1 NODE_5721_length_740_cov_33.2391 AUGUSTUS mRNA 483 659 . + . ID=g13708.t1;Parent=g13708;Name=g13708.t1 NODE_5721_length_740_cov_33.2391 AUGUSTUS exon 483 659 . + . ID=g13708.t1.exon1;Parent=g13708.t1 NODE_5721_length_740_cov_33.2391 AUGUSTUS CDS 483 659 . + 0 ID=cds.g13708.t1;Parent=g13708.t1 #PROT g13708.t1 g13708 LVSNPYQFDVMVMPNLYGNIVGNVGAGLVGGAGVVPGINIGHEFAIFEPVGCWCAYLW* # PASA_UPDATE: g3281.t1, single gene model update, valid-1, status:[pasa:asmbl_1391,status:12], valid-1 NODE_1375_length_11712_cov_40.3245 . gene 1672 3373 . + . ID=g3281;Name=g3281.t1 NODE_1375_length_11712_cov_40.3245 . mRNA 1672 3373 . + . ID=g3281.t1;Parent=g3281;Name=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 1672 1689 . + . ID=g3281.t1.exon1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 1672 1689 . + 0 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 1893 1975 . + . ID=g3281.t1.exon2;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 1893 1975 . + 0 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 2122 2236 . + . ID=g3281.t1.exon3;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 2122 2236 . + 1 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 2412 2492 . + . ID=g3281.t1.exon4;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 2412 2492 . + 0 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 2682 2752 . + . ID=g3281.t1.exon5;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 2682 2752 . + 0 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . exon 3155 3373 . + . ID=g3281.t1.exon6;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . CDS 3155 3371 . + 1 ID=cds.g3281.t1;Parent=g3281.t1 NODE_1375_length_11712_cov_40.3245 . three_prime_UTR 3372 3373 . + . ID=g3281.t1.utr3p1;Parent=g3281.t1 #PROT g3281.t1 g3281 MSYGKKYPQPGDKDFKEILAHKIYVGNINPTATDLDVLQLLKQYGAVRKLDFLYDALRKPRGYCFCEYVTRQDAERAQSNLDGLLFMERNLAAKFAKNKITGQAEMPNRRAHSTLAAPIGTLSGSDKIKAIEAKLKAMEHEAANPAPSSSARAMPAHTPLPHGHNNNGSYGNNSRGGFRHQGQHRRKDDRFRPY* # ORIGINAL: g3283.t1 original gene structure, not modified by PASA NODE_1375_length_11712_cov_40.3245 AUGUSTUS gene 6726 7814 . + . ID=g3283;Name=g3283.t1 NODE_1375_length_11712_cov_40.3245 AUGUSTUS mRNA 6726 7814 . + . ID=g3283.t1;Parent=g3283;Name=g3283.t1 NODE_1375_length_11712_cov_40.3245 AUGUSTUS exon 6726 7341 . + . ID=g3283.t1.exon1;Parent=g3283.t1 NODE_1375_length_11712_cov_40.3245 AUGUSTUS CDS 6726 7341 . + 0 ID=cds.g3283.t1;Parent=g3283.t1 NODE_1375_length_11712_cov_40.3245 AUGUSTUS exon 7612 7814 . + . ID=g3283.t1.exon2;Parent=g3283.t1 NODE_1375_length_11712_cov_40.3245 AUGUSTUS CDS 7612 7814 . + 2 ID=cds.g3283.t1;Parent=g3283.t1 #PROT g3283.t1 g3283 MSSSVRVTVCELSNDNQVRASQWTALVEHTRRSAPDIVLLPELPFSSWCMLEKPTGDAHRDSEWRRIQAEHSEFISHHISELSPATVLATLPVFDKSNGQRWNVGFAHVPSETNSIVHIHKKCYLPEEEGTYEQSYYCAADPNGGFEVARVAIPGGRHVTVGFLICSEVWAMQHAQRYSTQGCQLVLSPRATEAASVETWIAGGKSNAFIAGAYSLSSNRSGTVHFGGGGWIIDPRGQLLATTTNDTPFATVDIDLAAADRCKSQYPGYMWH* # PASA_UPDATE: g3284.t1, single gene model update, valid-1, status:[pasa:asmbl_1394,status:12], valid-1 NODE_1375_length_11712_cov_40.3245 . gene 8479 10771 . + . ID=g3284;Name=g3284.t1 NODE_1375_length_11712_cov_40.3245 . mRNA 8479 10771 . + . ID=g3284.t1;Parent=g3284;Name=g3284.t1 NODE_1375_length_11712_cov_40.3245 . exon 8479 8769 . + . ID=g3284.t1.exon1;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . CDS 8479 8769 . + 0 ID=cds.g3284.t1;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . exon 9069 10242 . + . ID=g3284.t1.exon2;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . CDS 9069 10242 . + 0 ID=cds.g3284.t1;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . exon 10594 10771 . + . ID=g3284.t1.exon3;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . CDS 10594 10763 . + 2 ID=cds.g3284.t1;Parent=g3284.t1 NODE_1375_length_11712_cov_40.3245 . three_prime_UTR 10764 10771 . + . ID=g3284.t1.utr3p1;Parent=g3284.t1 #PROT g3284.t1 g3284 MASLVYTLLFIVWTAVIGRAVAYVVVRVVRSKRYFASVDLLPGPPALPIIGNAHQLKRDGHEFVKQIYGWMLEYGDVFRIWLGTMPFVAINSPEYTEIILKGSKHIDKSFEYDFLHPWLGTGLLTSTGTKWKARRRLLTPTFHFEILNDFNEIFREQALILADKLSEGAKDAHAHGRGAAGIDVFPFVTKCTLDIICETAMGFCLRAQNQGNAEYVAAVNKVSELVHERQKNPLLWPESLYALTPQGIAQRRALSVLHGFSEGVIAARREMHERAHTASATDKHSDGNDGAGADDEDAPGKRKVRKAFLDLLLDASMAADSAPETDGEVNYARLSNEDIREEVDTFMFEGHDTTAAAVTWALYLLAAHPDVQDKARREVQAVLGDRTSPTAEDLHALKYVSMVAKEALRLYPSVPAFARSTTEDCPLPNGVVIPKGTEVGIVAYSLHRNPKVWDRPTEFIPERFSPDAEKGRHAYAYVPFSAGPRNCIGQKFAQMEEKVLLATILRRFDMTTTMRPEELQEMGEVILRPRNGVTVTFVERTDAL* # PASA_UPDATE: g3280.t1, single gene model update, valid-1, status:[pasa:asmbl_1390,status:3], valid-1 NODE_1375_length_11712_cov_40.3245 . gene 21 1295 . + . ID=g3280;Name=g3280.t1 NODE_1375_length_11712_cov_40.3245 . mRNA 21 1295 . + . ID=g3280.t1;Parent=g3280;Name=g3280.t1 NODE_1375_length_11712_cov_40.3245 . five_prime_UTR 21 180 . + . ID=g3280.t1.utr5p1;Parent=g3280.t1 NODE_1375_length_11712_cov_40.3245 . exon 21 449 . + . ID=g3280.t1.exon1;Parent=g3280.t1 NODE_1375_length_11712_cov_40.3245 . CDS 181 449 . + 0 ID=cds.g3280.t1;Parent=g3280.t1 NODE_1375_length_11712_cov_40.3245 . exon 724 1295 . + . ID=g3280.t1.exon2;Parent=g3280.t1 NODE_1375_length_11712_cov_40.3245 . CDS 724 1273 . + 1 ID=cds.g3280.t1;Parent=g3280.t1 NODE_1375_length_11712_cov_40.3245 . three_prime_UTR 1274 1295 . + . ID=g3280.t1.utr3p1;Parent=g3280.t1 #PROT g3280.t1 g3280 MGSHISTRTVIDAPAERVWDVLLAFGDYSAWNPFLTDVRLERSYPPLPGDTVRFDMRLPGSDSVIEIDPEILRVHEHSELQWRGRFLSSCCFGGDHYFVLERLGPDRCALHHGENFTGCAWHCCPCLVGPLLATRLRGGFVAMNGALKRRAERGKGTEWVVSSQPCASAASASASHMAAMSDGGGARGELEGVASSVASTFGQQAHPGPAITVGSVSDVASHDAFDGDRSTMFGGSSIGVYPDSDDDRLAIVHDGERAPLVYGTFGRFSKSV* # PASA_UPDATE: g3282.t1, single gene model update, valid-1, status:[pasa:asmbl_1393,status:3], valid-1 # PASA_UPDATE: g3282.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1392,status:12], valid-1 NODE_1375_length_11712_cov_40.3245 . gene 4032 6456 . + . ID=g3282;Name=g3282.t1 NODE_1375_length_11712_cov_40.3245 . mRNA 4032 6456 . + . ID=g3282.t1;Parent=g3282;Name=g3282.t1 NODE_1375_length_11712_cov_40.3245 . five_prime_UTR 4032 4133 . + . ID=g3282.t1.utr5p1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . exon 4032 5018 . + . ID=g3282.t1.exon1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . CDS 4134 5018 . + 0 ID=cds.g3282.t1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . exon 5217 5354 . + . ID=g3282.t1.exon2;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . CDS 5217 5354 . + 0 ID=cds.g3282.t1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . exon 5608 6456 . + . ID=g3282.t1.exon3;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . CDS 5608 5733 . + 0 ID=cds.g3282.t1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . three_prime_UTR 5734 6456 . + . ID=g3282.t1.utr3p1;Parent=g3282.t1 NODE_1375_length_11712_cov_40.3245 . mRNA 4032 6456 . + . ID=g3282.t1.1.5b6be70a;Parent=g3282;Name=g3282.t1 NODE_1375_length_11712_cov_40.3245 . five_prime_UTR 4032 4133 . + . ID=g3282.t1.1.5b6be70a.utr5p1;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . exon 4032 5018 . + . ID=g3282.t1.1.5b6be70a.exon1;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . CDS 4134 5018 . + 0 ID=cds.g3282.t1.1.5b6be70a;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . exon 5217 5354 . + . ID=g3282.t1.1.5b6be70a.exon2;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . CDS 5217 5354 . + 0 ID=cds.g3282.t1.1.5b6be70a;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . exon 5608 5685 . + . ID=g3282.t1.1.5b6be70a.exon3;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . CDS 5608 5685 . + 0 ID=cds.g3282.t1.1.5b6be70a;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . exon 5964 6456 . + . ID=g3282.t1.1.5b6be70a.exon4;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . CDS 5964 6284 . + 0 ID=cds.g3282.t1.1.5b6be70a;Parent=g3282.t1.1.5b6be70a NODE_1375_length_11712_cov_40.3245 . three_prime_UTR 6285 6456 . + . ID=g3282.t1.1.5b6be70a.utr3p1;Parent=g3282.t1.1.5b6be70a #PROT g3282.t1 g3282 MALNLTALTVDGAGVCHDMSLCVPSDGNNVGLAFGLTAAAGLSTTLGSLFPFFVRLDNVRVLAGCLGLSAGVMLYVSFAEILDESKGYFCCVQEKHDVLAATGCFFAGIICMVLLHSLVHSLQHCAARNLSAKFKGITKKITLSVRRQRDAGDHTTGSVSCVVRAASEAPPHLLESATLAAVPSLRKDGSLSANASATDIIEVELEISRRADQINEEMENREDLRGAETACNNCADRSDSHMTTAGESCLGNGRGDACPECAAAAQRVDTRLAIGVDGVTTDAATAFCEDEAASQRIALDANGRALMSALAESGDQACYETDRLKTMGLLTCIAMGIHNFPEGIATFVATLANPSLGYAMCVAIALHVSNLSSDCSLLATVY* #PROT g3282.t1.1.5b6be70a g3282 MALNLTALTVDGAGVCHDMSLCVPSDGNNVGLAFGLTAAAGLSTTLGSLFPFFVRLDNVRVLAGCLGLSAGVMLYVSFAEILDESKGYFCCVQEKHDVLAATGCFFAGIICMVLLHSLVHSLQHCAARNLSAKFKGITKKITLSVRRQRDAGDHTTGSVSCVVRAASEAPPHLLESATLAAVPSLRKDGSLSANASATDIIEVELEISRRADQINEEMENREDLRGAETACNNCADRSDSHMTTAGESCLGNGRGDACPECAAAAQRVDTRLAIGVDGVTTDAATAFCEDEAASQRIALDANGRALMSALAESGDQACYETDRLKTMGLLTCIAMGIHNFPEGIATFVATLANPSLGYAMCVAIALHNIPEGVCVAMPIYFATGSRRKAFMWAFLSGISEPIGAFLGWIVLKDVFGPAVYGTLFGLIGGMMVFIALRELIPMAHKFDPTDKIVSPCVVIGMFVMAVSLLLFEY* # PASA_UPDATE: g3407.t1, single gene model update, valid-1, status:[pasa:asmbl_7678,status:12], valid-1 NODE_4867_length_1184_cov_30.725 . gene 191 1041 . + . ID=g3407;Name=g3407.t1 NODE_4867_length_1184_cov_30.725 . mRNA 191 1041 . + . ID=g3407.t1;Parent=g3407;Name=g3407.t1 NODE_4867_length_1184_cov_30.725 . five_prime_UTR 191 191 . + . ID=g3407.t1.utr5p1;Parent=g3407.t1 NODE_4867_length_1184_cov_30.725 . exon 191 446 . + . ID=g3407.t1.exon1;Parent=g3407.t1 NODE_4867_length_1184_cov_30.725 . CDS 192 446 . + 0 ID=cds.g3407.t1;Parent=g3407.t1;5_prime_partial=true NODE_4867_length_1184_cov_30.725 . exon 642 773 . + . ID=g3407.t1.exon2;Parent=g3407.t1 NODE_4867_length_1184_cov_30.725 . CDS 642 773 . + 0 ID=cds.g3407.t1;Parent=g3407.t1 NODE_4867_length_1184_cov_30.725 . exon 957 1041 . + . ID=g3407.t1.exon3;Parent=g3407.t1 NODE_4867_length_1184_cov_30.725 . CDS 957 1041 . + 0 ID=cds.g3407.t1;Parent=g3407.t1;3_prime_partial=true #PROT g3407.t1 g3407 CEHLAPKNCRGDHLKRYKKAGGEIGTSKLSKCQLYILDTQGELLARLALDPQGPQKGGRPHNFEVKHFKTGSNCAQCFGSVWMVEGAHCRNCGLNVHEECKKKMPQLCGLVGQLRIKYKYTEEPILPLQVYEPFMSLIFGEELYLINLLQDSTAQKE # ORIGINAL: g2243.t1 original gene structure, not modified by PASA NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS gene 309 2350 . - . ID=g2243;Name=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS mRNA 309 2350 . - . ID=g2243.t1;Parent=g2243;Name=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 2241 2350 . - . ID=g2243.t1.exon1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 2241 2350 . - 0 ID=cds.g2243.t1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 1884 2118 . - . ID=g2243.t1.exon2;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 1884 2118 . - 1 ID=cds.g2243.t1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 1144 1701 . - . ID=g2243.t1.exon3;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 1144 1701 . - 0 ID=cds.g2243.t1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 942 1016 . - . ID=g2243.t1.exon4;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 942 1016 . - 0 ID=cds.g2243.t1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 586 691 . - . ID=g2243.t1.exon5;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 586 691 . - 0 ID=cds.g2243.t1;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS exon 309 400 . - . ID=g2243.t1.exon6;Parent=g2243.t1 NODE_3926_length_2505_cov_38.4922_potentialcontaminant AUGUSTUS CDS 309 400 . - 2 ID=cds.g2243.t1;Parent=g2243.t1 #PROT g2243.t1 g2243 MRLGIRRFEYCGSLVVPMAITSEGIDLNSTSRALLWLYLGGGSFLEPLRAGYDKLPFSIDFGAPQWDDERRRARSRSLVEDGPDGSLAADRSPFADASQLILMNSFADPTRLRVPVATELFRRMGVPVPRVGLARLTINGVYYGLYHAIEHIADTLPRIQQAHDDGNMCGSVVGALYEPNADLDKFHPQYFVPRNIRALASARGGHTQAVVVQASPSVEGAAVAWEACVSDAWMLWRATHEQLMAPRRRSDREWFGGPDFSAVAFESTFEAGEFAEALAVNMAVANLDTYGFANHNYFIYKDSCTGKLRFIPWDFDLAFDGRFMSPVSLANIERNWVLVRGIVDDPALFARYQASLIRFVEEHMTDSVVQHIIDEWYTAMRPHVVTEDEGT* # ORIGINAL: g13045.t1 original gene structure, not modified by PASA NODE_2192_length_7340_cov_41.6235 AUGUSTUS gene 1404 6502 . - . ID=g13045;Name=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS mRNA 1404 6502 . - . ID=g13045.t1;Parent=g13045;Name=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 6378 6502 . - . ID=g13045.t1.exon1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 6378 6502 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 6001 6140 . - . ID=g13045.t1.exon2;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 6001 6140 . - 1 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 5514 5755 . - . ID=g13045.t1.exon3;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 5514 5755 . - 2 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 5009 5265 . - . ID=g13045.t1.exon4;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 5009 5265 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 4761 4888 . - . ID=g13045.t1.exon5;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 4761 4888 . - 1 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 4464 4540 . - . ID=g13045.t1.exon6;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 4464 4540 . - 2 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 4073 4201 . - . ID=g13045.t1.exon7;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 4073 4201 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 3441 3866 . - . ID=g13045.t1.exon8;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 3441 3866 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 1992 3278 . - . ID=g13045.t1.exon9;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 1992 3278 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS exon 1404 1586 . - . ID=g13045.t1.exon10;Parent=g13045.t1 NODE_2192_length_7340_cov_41.6235 AUGUSTUS CDS 1404 1586 . - 0 ID=cds.g13045.t1;Parent=g13045.t1 #PROT g13045.t1 g13045 MATADAPGVHDRRNAGLGSLAALPDEMLASIFASLDKKDLLSLCAVSPILYVLASDESLWMAICVEQNHADIQFRRSWKISTFAKQGKPHDTAPPPVYFWGISSMHVYAKWLRSHMDVSAFVPENALLALQRVKGISPAEFSRQFDESRMPVLLEGLTDGWPAFRNWTKDSLVARYGQMRFKVAHDASSKLRVELPIRDYLEYAEVQSDENPMYVFESGFGEKSPSMLEDYTVPPHFALDYFELLPKEFRPTYRWFVMGPARSGASWHVDPTGTSAWNALICGRKRWALYPPHVTPPGVTSQCDKMGRPCSFDSPSSLVWYLEIYRALDPKDRPLEIVQHPGDVVFVPAGWWHMVLNLDFAIAVTQNFVSDANLSASIYNLRASPPYLGYMRALARSRRCEGCAVPVIASNYVPMEDNHVTPVAKAHRVCDGACLSIPAATTGPYVRSSSCSALEEELFPLREGFSGTSKMEASFKDVARWRPRIDAVATAAGIGADHVDPAMHGENAVFMVTSSASSCTGEFVIKFYKRNAQRLRPTWLQEIAGYSAVAVDASIARLFPRMVYHGEFSRADIPPLLPASSDESATAANGRADGRTAPKCALGTDGAPNMATRGKYDPEKDIERCRSIDSDRRWAWPHAVFARVCGESMSQATDEFSSADWDAFVPFVARVLTSLHALAHTHTSSVVAVATSHRGSAGVAERSVDPRDGGCKLTTDSAQLDFLTTHTDADTLWASYAVILQRRLDECVGRHVTWGTLPMRLLVTLADYLPPSAASIILERTPPDAPRGFAVEPAYCHGDLTDDNILGVWEQHCLPPCTAASCSVGGNVHPPQETVVSGTPPMKRQKVADTRERDAGMDCDVHVEDDVAGNVHATSCVCVRACDGEVVGALQTSAERRWMPTAIVDLGDSCVGDWMMDLVPLHLAIFRCDKSRLRAFLAHYKPEVLQHPEWFRRRAMLFTLLHPFDAIRTVFYRHPELPETVATWDELATTLWGLTDV* # PASA_UPDATE: g6412.t1, single gene model update, valid-1, status:[pasa:asmbl_1085,status:3], valid-1 NODE_1286_length_12394_cov_50.9441 . gene 4093 6547 . + . ID=g6412;Name=g6412.t1 NODE_1286_length_12394_cov_50.9441 . mRNA 4093 6547 . + . ID=g6412.t1;Parent=g6412;Name=g6412.t1 NODE_1286_length_12394_cov_50.9441 . five_prime_UTR 4093 4271 . + . ID=g6412.t1.utr5p1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . exon 4093 4862 . + . ID=g6412.t1.exon1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . CDS 4272 4862 . + 0 ID=cds.g6412.t1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . exon 5107 5480 . + . ID=g6412.t1.exon2;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . CDS 5107 5480 . + 0 ID=cds.g6412.t1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . exon 5813 5892 . + . ID=g6412.t1.exon3;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . CDS 5813 5892 . + 1 ID=cds.g6412.t1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . exon 6210 6547 . + . ID=g6412.t1.exon4;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . CDS 6210 6322 . + 2 ID=cds.g6412.t1;Parent=g6412.t1 NODE_1286_length_12394_cov_50.9441 . three_prime_UTR 6323 6547 . + . ID=g6412.t1.utr3p1;Parent=g6412.t1 #PROT g6412.t1 g6412 MDRTNALSELALMFPQMERDILDAVLRANNNVLEASIDNLLAMTDPSATQSQPQQPQQQQQQQPSAQRSQQPPSAHQEAPREVHWADPSVQVDFRREFESLRVGGTEGAVPPYSLHAPPSQSSGAGYWRDGLVDQGPPPLEPIAQVTSSASSAVDTPSRNRPAASPIIGRLPDDFLILLTKETRGGSKARTGSQVEQDELFARMLQNEEFMQQLDSNPEFRQALDADRRRQRTAARTNSQPTVQPATATATATTTHAQNTVATTAATTTSDGKRPSASEEDVPFMMRLQSMGDATKKKFQELAQKFTAKSAGGPTGSPLRYSSLPGGDEADANLLGESDDELLDEPALEDGRLGNRGGDARSDSSASMNRGSTKSPRRPSQLALQ* # ORIGINAL: g6411.t1 original gene structure, not modified by PASA NODE_1286_length_12394_cov_50.9441 AUGUSTUS gene 251 1819 . - . ID=g6411;Name=g6411.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS mRNA 251 1819 . - . ID=g6411.t1;Parent=g6411;Name=g6411.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 251 1819 . - . ID=g6411.t1.exon1;Parent=g6411.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 251 1819 . - 0 ID=cds.g6411.t1;Parent=g6411.t1 #PROT g6411.t1 g6411 MAPTSANVGSNGGHAVARVRSCPNGTPDAHDGSAHIVVFPPSRRISEAPPPPLPPRPDSLENLWHGSSSPVSSRSASPTLSDSSWASIDKTDISISEKSEVLSPTVCDEVAAITANGTGLGRTSSAYGYIDLSVATAEEPRDPDGEMPSSSSCSSDLSGHGSDAVDVTANMRLDARHMGVSSADMSVAATAALNDFLWSGKMLCDPHLKPLLRPRDSKFLSGVSTGSLAPAQERVAQIQTRVNAMLVQQLRFQRIVTRMIRGHMEFLHDVDEYLVAHPSEQQNQLAQVKHHIGEHRRSSTHSAGGKDSKHGIHTRSFFSIYSSSSKSADKGDKKHLKRHLTAPARTFSEGAATGRHRSPSVTSDGSDNSLPPMLLANAFDTPVPRDSHVSDGVASFYDEWKATIMPYIRRYESSETTDSIGSHIAERIYGTDDPVIIESVNAAFLADASHHSHHNHAQQADPHHPHHHHHARAPIFLPAIGKIVERFREEMNIFERLHDDCETWFLHTLDVLSRMYVVAHVQ* # PASA_UPDATE: g6413.t1, single gene model update, valid-1, status:[pasa:asmbl_1086,status:3], valid-1 NODE_1286_length_12394_cov_50.9441 . gene 6961 9515 . + . ID=g6413;Name=g6413.t1 NODE_1286_length_12394_cov_50.9441 . mRNA 6961 9515 . + . ID=g6413.t1;Parent=g6413;Name=g6413.t1 NODE_1286_length_12394_cov_50.9441 . five_prime_UTR 6961 7188 . + . ID=g6413.t1.utr5p1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . five_prime_UTR 7308 7496 . + . ID=g6413.t1.utr5p2;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . exon 6961 7188 . + . ID=g6413.t1.exon1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . exon 7308 7648 . + . ID=g6413.t1.exon2;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . CDS 7497 7648 . + 0 ID=cds.g6413.t1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . exon 7882 7930 . + . ID=g6413.t1.exon3;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . CDS 7882 7930 . + 1 ID=cds.g6413.t1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . exon 8227 8751 . + . ID=g6413.t1.exon4;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . CDS 8227 8751 . + 0 ID=cds.g6413.t1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . exon 9067 9515 . + . ID=g6413.t1.exon5;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . CDS 9067 9312 . + 0 ID=cds.g6413.t1;Parent=g6413.t1 NODE_1286_length_12394_cov_50.9441 . three_prime_UTR 9313 9515 . + . ID=g6413.t1.utr3p1;Parent=g6413.t1 #PROT g6413.t1 g6413 MRACINWYAVAIDMSPSQNALIDLKIAAINHVEHAEFVELIGLRDASPESRLATYDRIREHVPSYARDYWDSQRALIGSGIAYSGKLERFFRGFAVGPLLEHVTREQIEHIWSQPDVATQAAAVDASPLVSDAFRAAFVKYFGREAIQSEGRDPAQFKYVNKGDVGGYFYDRFLYTMRNVQLRGNPYMEIFLTTTQRDLSLSVPYLKPENYSRLRSLLPRITVVTDTIEGYLAKFPAGKFNKANLSDIFEYMSEDAGDALSTALAKHFRIGGRLAFWNLLAPREPSVGLRGILKPHRELATKLWNGDRAFFYSAFHVEEIISH* # ORIGINAL: g6414.t1 original gene structure, not modified by PASA NODE_1286_length_12394_cov_50.9441 AUGUSTUS gene 9867 12023 . - . ID=g6414;Name=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS mRNA 9867 12023 . - . ID=g6414.t1;Parent=g6414;Name=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 11832 12023 . - . ID=g6414.t1.exon1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 11832 12023 . - 0 ID=cds.g6414.t1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 11622 11640 . - . ID=g6414.t1.exon2;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 11622 11640 . - 0 ID=cds.g6414.t1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 11175 11263 . - . ID=g6414.t1.exon3;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 11175 11263 . - 2 ID=cds.g6414.t1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 10796 10917 . - . ID=g6414.t1.exon4;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 10796 10917 . - 0 ID=cds.g6414.t1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 10338 10516 . - . ID=g6414.t1.exon5;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 10338 10516 . - 1 ID=cds.g6414.t1;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS exon 9867 9946 . - . ID=g6414.t1.exon6;Parent=g6414.t1 NODE_1286_length_12394_cov_50.9441 AUGUSTUS CDS 9867 9946 . - 2 ID=cds.g6414.t1;Parent=g6414.t1 #PROT g6414.t1 g6414 MLHPTVSHLFNPFAIDLIGHCIPRWSYILYLVGKHLSENNFDHVGLYAKVEWPLKVFQSAAALEVLHCIIGIVKSPVNVTFTQVLSRVALVWLIAHSVPETQDNIAFLLMTLAWTITEIIRYMYYALNIVDAVPYVLVWLRYTLFYILYPLGVTGEMLMIYSAIPHAAASKIYSPQMPNTWNISWNFHQLLYVMLLIYLPGFPPMYMHMIRQRKKIIGGGDKAKTH* # ORIGINAL: g10192.t1 original gene structure, not modified by PASA NODE_3388_length_3574_cov_38.3255 AUGUSTUS gene 445 3341 . - . ID=g10192;Name=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS mRNA 445 3341 . - . ID=g10192.t1;Parent=g10192;Name=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 3265 3341 . - . ID=g10192.t1.exon1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 3265 3341 . - 0 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 2680 2900 . - . ID=g10192.t1.exon2;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 2680 2900 . - 1 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 2291 2433 . - . ID=g10192.t1.exon3;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 2291 2433 . - 2 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 1839 1919 . - . ID=g10192.t1.exon4;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 1839 1919 . - 0 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 1419 1508 . - . ID=g10192.t1.exon5;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 1419 1508 . - 0 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 826 911 . - . ID=g10192.t1.exon6;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 826 911 . - 0 ID=cds.g10192.t1;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS exon 445 562 . - . ID=g10192.t1.exon7;Parent=g10192.t1 NODE_3388_length_3574_cov_38.3255 AUGUSTUS CDS 445 562 . - 1 ID=cds.g10192.t1;Parent=g10192.t1 #PROT g10192.t1 g10192 MKEDMRLLWTEFMRTKAVLDNSGDRRDYILSWVATDGLRIVEALGIPEGHIKINQLLPESLVEDLSVSELKTKVDYDAHAQYVRVHPYVKDTISTILDRGTESSQIKVVMSQFVDAYITKHFHTGYQPSPEAKDPRDLPLTAKQLAQIKTLFRELTAEVLFERHGSRILVETCEVFLKDFLEFRATKLTTANRCTFNDLRMIFESLIRKSIYLHGERVDIDDLDREKASEYMRFFDQTLRVVSRLTDIPDEAAGQLSRHLDEENLKSFTKFE # PASA_UPDATE: g1507.t1, single gene model update, valid-1, status:[pasa:asmbl_4783,status:12], valid-1 NODE_2678_length_5475_cov_37.5815 . gene 2862 5370 . - . ID=g1507;Name=g1507.t1 NODE_2678_length_5475_cov_37.5815 . mRNA 2862 5370 . - . ID=g1507.t1;Parent=g1507;Name=g1507.t1 NODE_2678_length_5475_cov_37.5815 . five_prime_UTR 5369 5370 . - . ID=g1507.t1.utr5p1;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . exon 4778 5370 . - . ID=g1507.t1.exon1;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . CDS 4778 5368 . - 0 ID=cds.g1507.t1;Parent=g1507.t1;5_prime_partial=true NODE_2678_length_5475_cov_37.5815 . exon 4192 4515 . - . ID=g1507.t1.exon2;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . CDS 4192 4515 . - 0 ID=cds.g1507.t1;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . exon 2862 3869 . - . ID=g1507.t1.exon3;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . CDS 3342 3869 . - 0 ID=cds.g1507.t1;Parent=g1507.t1 NODE_2678_length_5475_cov_37.5815 . three_prime_UTR 2862 3341 . - . ID=g1507.t1.utr3p1;Parent=g1507.t1 #PROT g1507.t1 g1507 SLAFLAAATHGLHDDALRIASAANKDPSTLPGPLRNAQLLIPPQPLLPSHESNWPLLTVSRGYFEGAVKSKENTGAASLAAAETIEHVGAAGGDDDGWGDDINVNLDGEEGDARGGARRGGGGGGGDEDAGEDGEGGWEVDEELELPAESLDAGAATTGDGYYAPPTPGVPTQQLWCNNSQLAGDHAAAGSFATAMQLLNTQIGAVNFEPLKPMFLSAYASSRAAVGGLTSGPPMLVGIHRNWAEATRQSCVPAASLKLGELVSRLQAAYTATTGGKFAEAVTRFSNILSSIPLLVVDTKQDLTEALQLMSICREYILGLTLETVRKDLKKESLEDNKRGCELAAYFTHCNLQPVHLILTLRTAVNVFFKLENFKTAASFARRLLELGPRPEVAQQIRKILQACDKTPKDTHKLNYDELNPFVVCGISMVPIYKGKPTVKCAYCSQAYLPEHKGKLCRVCNIAEIGRDGLGLHISQLQFR* # PASA_UPDATE: g1506.t1, single gene model update, valid-1, status:[pasa:asmbl_4781,status:12], valid-1 NODE_2678_length_5475_cov_37.5815 . gene 158 2724 . + . ID=g1506;Name=g1506.t1 NODE_2678_length_5475_cov_37.5815 . mRNA 158 2724 . + . ID=g1506.t1;Parent=g1506;Name=g1506.t1 NODE_2678_length_5475_cov_37.5815 . five_prime_UTR 158 158 . + . ID=g1506.t1.utr5p1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 158 263 . + . ID=g1506.t1.exon1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 159 263 . + 0 ID=cds.g1506.t1;Parent=g1506.t1;5_prime_partial=true NODE_2678_length_5475_cov_37.5815 . exon 527 575 . + . ID=g1506.t1.exon2;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 527 575 . + 0 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 949 985 . + . ID=g1506.t1.exon3;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 949 985 . + 2 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 1217 1306 . + . ID=g1506.t1.exon4;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 1217 1306 . + 1 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 1485 1552 . + . ID=g1506.t1.exon5;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 1485 1552 . + 1 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 1792 1900 . + . ID=g1506.t1.exon6;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 1792 1900 . + 2 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 2181 2295 . + . ID=g1506.t1.exon7;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 2181 2295 . + 1 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . exon 2490 2724 . + . ID=g1506.t1.exon8;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . CDS 2490 2645 . + 0 ID=cds.g1506.t1;Parent=g1506.t1 NODE_2678_length_5475_cov_37.5815 . three_prime_UTR 2646 2724 . + . ID=g1506.t1.utr3p1;Parent=g1506.t1 #PROT g1506.t1 g1506 SPDNARFGSGGGDKVVMLWDVATGNPIRKFRGHVARINCVKFNAEASILISGSYDASVRIWDCRAQNFKPIQTLSEAKDSVTSLAVSANEILTASVDGSLRCYDVRVGALVVSSVGHPVTSARFTNDNNCMLASSLDSHIRLIDKDTGDVLGTYSGHKNTDYKVDNCLSFDDAFVVSGSETGRVYFWDLVEGRVAHTIQANNGGPVYSVSYHPSEHLLMSAGSDGTAVLWGRDDAVDDASGL* # ORIGINAL: g9446.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 27426 29763 . - . ID=g9446;Name=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 27426 29763 . - . ID=g9446.t1;Parent=g9446;Name=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 29745 29763 . - . ID=g9446.t1.exon1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 29745 29763 . - 0 ID=cds.g9446.t1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 29313 29646 . - . ID=g9446.t1.exon2;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 29313 29646 . - 2 ID=cds.g9446.t1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 28875 28982 . - . ID=g9446.t1.exon3;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 28875 28982 . - 1 ID=cds.g9446.t1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 28111 28712 . - . ID=g9446.t1.exon4;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 28111 28712 . - 1 ID=cds.g9446.t1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 27771 27931 . - . ID=g9446.t1.exon5;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 27771 27931 . - 2 ID=cds.g9446.t1;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 27426 27554 . - . ID=g9446.t1.exon6;Parent=g9446.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 27426 27554 . - 0 ID=cds.g9446.t1;Parent=g9446.t1 #PROT g9446.t1 g9446 MASNLAGPAPKGFGSFHSVSVEYLISQKDGEYNPPPLPFAIPTFVWHEDAPSPKSLEGNGDIVVGPFGQRARKDLFSLEEDCCFVNHGAFGAVLNASMAWANQWRSHCEKQPLRFFDRNVTTAVNAIVRSLDLRPSECIYHLNLMYGSFKKLARDECERASVRTPWTANDRSTATDDDDHRPAHVVVADVTFPLASASDLVDLVARTLPEQGCRLAIFDHISSVTALVHPVEDLVRLCRSRGIPVLIDGAHALGSLPISMRNIDADYYVANAHKWMCNPKGCGFLYVNSRMRRERSVRALAVSHGWGEGFLSEFAWTGLDDYSPWLSLHATLAFWRCAGPQRIREYNAAVLKDAVNLLEATWNTEPLCSPALFGPMALVGLPLGSGASWTGNDAESFQNALYTDHNVEVPVKCVQGRLYVRISAHIYNVRADYERLAVAVLEVISKSHVA* # ORIGINAL: g9443.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 17975 19301 . - . ID=g9443;Name=g9443.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 17975 19301 . - . ID=g9443.t1;Parent=g9443;Name=g9443.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 18491 19301 . - . ID=g9443.t1.exon1;Parent=g9443.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 18491 19301 . - 0 ID=cds.g9443.t1;Parent=g9443.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 17975 18213 . - . ID=g9443.t1.exon2;Parent=g9443.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 17975 18213 . - 2 ID=cds.g9443.t1;Parent=g9443.t1 #PROT g9443.t1 g9443 MAKTSSFYVELLQSIAADLDEILEDVLLCEDVLDVPNPAAGPQTHNVRESVAPRGVSGGAFGELADFFQFCEGDDDDSFPSFTLSVNDVNVGGNQPSARVDSSSDDEDEDALRPSLGPNSGAALAVEEVMLRSKNSNRSTGIDFVGFTSSLPVSTLRPPSNVRVSTVVPQSAEPATTARAYDVNRNSAVDIIDAYIGSSGEGGNDAACSMPASTGAVATDADIDEAIAFAVASLENAGVTMDPDESTAEATAHVQQKDSNTAIQRAQTFAGTDVRRSLLASDAPAPHSGASKPIGGLSLSFAALPPPPPKPKEKKGDKDNKDNKDSKDNKEKKDKKDKSSECGGSVGVV* # ORIGINAL: g9438.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 298 2628 . + . ID=g9438;Name=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 298 2628 . + . ID=g9438.t1;Parent=g9438;Name=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 298 403 . + . ID=g9438.t1.exon1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 298 403 . + 1 ID=cds.g9438.t1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 1133 1230 . + . ID=g9438.t1.exon2;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 1133 1230 . + 0 ID=cds.g9438.t1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 1578 1624 . + . ID=g9438.t1.exon3;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 1578 1624 . + 1 ID=cds.g9438.t1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 1797 1895 . + . ID=g9438.t1.exon4;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 1797 1895 . + 2 ID=cds.g9438.t1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 2168 2313 . + . ID=g9438.t1.exon5;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 2168 2313 . + 2 ID=cds.g9438.t1;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 2575 2628 . + . ID=g9438.t1.exon6;Parent=g9438.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 2575 2628 . + 0 ID=cds.g9438.t1;Parent=g9438.t1 #PROT g9438.t1 g9438 DIVGFTDIASHSTPLQVVDLLNDLYTSFDSVIDQHVSGLPQRNANRHAGEIATMALDLLSATTEFRIRHMPDKTLQLRVGMHSGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFALRIHMSESTVTILEELGGYEIEKRGTLAVKGKGEMTTYWLNGKRGYTKKLPDLALAASMSQHHFK* # ORIGINAL: g9440.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 6512 9744 . - . ID=g9440;Name=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 6512 9744 . - . ID=g9440.t1;Parent=g9440;Name=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 9670 9744 . - . ID=g9440.t1.exon1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 9670 9744 . - 0 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 9339 9424 . - . ID=g9440.t1.exon2;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 9339 9424 . - 0 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 9118 9218 . - . ID=g9440.t1.exon3;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 9118 9218 . - 1 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 8686 8792 . - . ID=g9440.t1.exon4;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 8686 8792 . - 2 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 8401 8540 . - . ID=g9440.t1.exon5;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 8401 8540 . - 0 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 7822 7973 . - . ID=g9440.t1.exon6;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 7822 7973 . - 1 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 7490 7613 . - . ID=g9440.t1.exon7;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 7490 7613 . - 2 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 7271 7358 . - . ID=g9440.t1.exon8;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 7271 7358 . - 1 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 6951 7007 . - . ID=g9440.t1.exon9;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 6951 7007 . - 0 ID=cds.g9440.t1;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 6512 6631 . - . ID=g9440.t1.exon10;Parent=g9440.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 6512 6631 . - 0 ID=cds.g9440.t1;Parent=g9440.t1 #PROT g9440.t1 g9440 MESVTDVVIAVGGVRGETLPGGYVLIEKTAEGHSANVNKKQGLFPHQMFLAVRRSAVDGDVVTGLSFIVKDREPVTYGHYAVEHTLKGHSALLSKSCGSMQLCVRKESRQTATVAVTDIILLQPPRGTGAPVGYTVVERDLNDRQADPMFLCYKTMPLRNQPPLAQQMNRGPGSVRYGQAPPAQQQQQLQPMQVEQPPPYIMYSAPQVGQLQGNASGYGPGSLTSIAPPGPSWTGQPTQPTQPTNQPQFSQNATDNECHPDRSDALHLRLIYVNLEGVPIKVLGEKTSQNNVSVDLSKVVAMTTAEIERQFAYSFETERRIAPVTCAISANDARENDEQMDAAVDALRI* # ORIGINAL: g9441.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 10408 14213 . + . ID=g9441;Name=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 10408 14213 . + . ID=g9441.t1;Parent=g9441;Name=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 10408 11594 . + . ID=g9441.t1.exon1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 10408 11594 . + 0 ID=cds.g9441.t1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 11861 12197 . + . ID=g9441.t1.exon2;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 11861 12197 . + 1 ID=cds.g9441.t1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 12334 12420 . + . ID=g9441.t1.exon3;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 12334 12420 . + 0 ID=cds.g9441.t1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 12646 12768 . + . ID=g9441.t1.exon4;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 12646 12768 . + 0 ID=cds.g9441.t1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 13039 13218 . + . ID=g9441.t1.exon5;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 13039 13218 . + 0 ID=cds.g9441.t1;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 13527 14213 . + . ID=g9441.t1.exon6;Parent=g9441.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 13527 14213 . + 0 ID=cds.g9441.t1;Parent=g9441.t1 #PROT g9441.t1 g9441 MSKMGHNAEFFSVGMDLTTSCLSHLRRKHNRVGKLKVMDALRTGFYHDPINGRTDLPLADICRALIAEVKEFGRVNNNNYDQFESEMMPGQVTVNLDGSPNRTANAGYEQLTPKEKHMEDMRAWLLSALAVVRYEVPTADTVLLEQLGNEPSLWCRYYVLEALAQSLDSRPPDGPVQRVTTEDFARAALRIPKNDGTVEDLSVTCGLMPAQALADEFELRRRILEVKTGALSGGRQRTSVFSGIEGMDASGTIVATDTSLHSLESQLNVLMSRQVLYRMSCALQAKTLGPSPERRLAAKKCTEGLSQECDDTILQKATLRALRACCVEDTHKPLCALVDRQSEQRNWDYDAIMAIGEFGALRGDKVRGTHDFVSDMKVAAAFRLENVVLESGPYPRYDELRSTAIWCLGRLECDVVQATLLQSLTDPSPMIVKQAARSLEKILGAARACARIIEEMASTNGQEESYSNALRWMSDQSNVLKCMNEAVGSTKNEVQSAAYRLLIAHGGKDALTRLTALKDNMAAFRALAEHEEGRMRTIFDRGLKDARRGFNVALTMDITVFILGIALIVIAAILALKKDGSLADFVGASASGSFGVLGILYSTLVAKPRKKVEESMNHLYTLQTVFMGFLNIIHKLDQAFSRRLLDDEPIDGSELLVFHDSLERAVNSTVVQFDNMATLRMRLDSHEESRTDANGEPQRPSGWRGVVVSLLGDTKVHPVETVVDAIATNLAAYVESKQEGAKYRALMAAVKEMRKIAESSVAALARQRVTKNGQPQRQQQQQRSSSKDGTAALGGNVDPGITAEELAPIVQKVVREVAKAVHVLHGAGLLVVERQFDGRLYPEVRAAIDAPRSGALNAWNDNAEEV* # PASA_UPDATE: g9439.t1, single gene model update, valid-1, status:[pasa:asmbl_3186,status:12], valid-1 NODE_199_length_32030_cov_41.2404 . gene 3461 5916 . - . ID=g9439;Name=g9439.t1 NODE_199_length_32030_cov_41.2404 . mRNA 3461 5916 . - . ID=g9439.t1;Parent=g9439;Name=g9439.t1 NODE_199_length_32030_cov_41.2404 . five_prime_UTR 5822 5916 . - . ID=g9439.t1.utr5p1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . exon 5806 5916 . - . ID=g9439.t1.exon1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . CDS 5806 5821 . - 0 ID=cds.g9439.t1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . exon 5351 5472 . - . ID=g9439.t1.exon2;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . CDS 5351 5472 . - 2 ID=cds.g9439.t1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . exon 4412 5123 . - . ID=g9439.t1.exon3;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . CDS 4412 5123 . - 0 ID=cds.g9439.t1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . exon 3461 4222 . - . ID=g9439.t1.exon4;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . CDS 3774 4222 . - 2 ID=cds.g9439.t1;Parent=g9439.t1 NODE_199_length_32030_cov_41.2404 . three_prime_UTR 3461 3773 . - . ID=g9439.t1.utr3p1;Parent=g9439.t1 #PROT g9439.t1 g9439 MAHPKAFELAPTVQSYAWGKKGRSSLVAQVIAHHGTEIDETMPYAELWMGTHPNGPNKVKHTDGQYLSERIKADVSLIGDAVSSQFSGELPFLFKILSVGQSLSIQAHPDARLAKQLHSAQPKNYPDANHKPELAIALTEFSGMCGFRSLSELSHFVQSVPELAAVLGDAASVVVSASKTHADDDTTPTAIAARVSAIRCAFRALMTADQSLVCANVSLLQSRLSAASEAPSRGSADAWFLRLCVDYPGDVGCLAVYVLNVVTLAAGQGMFMAANEPHAYLDGDCIECMACSDNVVRAGLTPKFKDVNTLIDMLTYRHGPESRSLVEGAPSRSDPAHVFEYEPPVAEFAVHSARVPRGERATLSAVDGPSIVLVVSGSGTLSVEEAKSEIDFAIEKGSVLFIGANRSACIRASEASAETVVAFRAHCRPSVS* # PASA_UPDATE: g9442.t1, single gene model update, valid-1, status:[pasa:asmbl_3187,status:12], valid-1 NODE_199_length_32030_cov_41.2404 . gene 14565 17115 . - . ID=g9442;Name=g9442.t1 NODE_199_length_32030_cov_41.2404 . mRNA 14565 17115 . - . ID=g9442.t1;Parent=g9442;Name=g9442.t1 NODE_199_length_32030_cov_41.2404 . five_prime_UTR 17107 17115 . - . ID=g9442.t1.utr5p1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . five_prime_UTR 16883 16903 . - . ID=g9442.t1.utr5p2;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 17107 17115 . - . ID=g9442.t1.exon1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 16817 16903 . - . ID=g9442.t1.exon2;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 16817 16882 . - 0 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 16402 16596 . - . ID=g9442.t1.exon3;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 16402 16596 . - 0 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 16110 16235 . - . ID=g9442.t1.exon4;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 16110 16235 . - 0 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 15937 15994 . - . ID=g9442.t1.exon5;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 15937 15994 . - 0 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 15280 15744 . - . ID=g9442.t1.exon6;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 15280 15744 . - 2 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . exon 14565 14967 . - . ID=g9442.t1.exon7;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . CDS 14864 14967 . - 2 ID=cds.g9442.t1;Parent=g9442.t1 NODE_199_length_32030_cov_41.2404 . three_prime_UTR 14565 14863 . - . ID=g9442.t1.utr3p1;Parent=g9442.t1 #PROT g9442.t1 g9442 MADYIHTQRKIGLNNVLSKYIREYTNLADININAIIEGALQKAVIGPLRNTIVRLILEDLRQKGAVEGIAANMRALARKSQEDAGIAPKFVSSLGWTHPTAFLHKMQRTALPLKKLENLLRTVSAIHATVERSFAAADDGKQVVLGADDFLPIFIYVLALSGIDTPEVETEYMWGLLDPNILTGEGGYYLTVLSSAVHVLKTYSDDAQTHAHAHAHGTSVAASASASVATGSSKGSTRRVSRWPRVDDMQGFLRVYFPDDGLRVFKTFPVRPTTTAAETARAIEKKMRLPAGVYCLVEVRGGVEIPLDESHLPQMRKGDWPDERPPGHYQFNFVRRP* # ORIGINAL: g9447.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 30118 31772 . + . ID=g9447;Name=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 30118 31772 . + . ID=g9447.t1;Parent=g9447;Name=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 30118 30254 . + . ID=g9447.t1.exon1;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 30118 30254 . + 0 ID=cds.g9447.t1;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 30430 30673 . + . ID=g9447.t1.exon2;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 30430 30673 . + 1 ID=cds.g9447.t1;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 31139 31225 . + . ID=g9447.t1.exon3;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 31139 31225 . + 0 ID=cds.g9447.t1;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 31608 31772 . + . ID=g9447.t1.exon4;Parent=g9447.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 31608 31772 . + 0 ID=cds.g9447.t1;Parent=g9447.t1 #PROT g9447.t1 g9447 MPNSQSVGQLYADLSHKLALDDPDHEGAVALLDRRVFEPAKRSIYAILALSPADDTALRCKAVALIHSGRFDEAIALINGHPAVASTLQFELAYAHYRLYQPQQALDIIRRHPNRTDVRFRELEAQADDTRERATNLLAAATNALLADSSWAVAHQDPAERDDESTYELCFNAGCLAIARGDLRRASRKLTKAEGVHARNYTLFVIWLFD* # PASA_UPDATE: g9445.t1, single gene model update, valid-1, status:[pasa:asmbl_3188,status:12], valid-1 NODE_199_length_32030_cov_41.2404 . gene 24978 27050 . + . ID=g9445;Name=g9445.t1 NODE_199_length_32030_cov_41.2404 . mRNA 24978 27050 . + . ID=g9445.t1;Parent=g9445;Name=g9445.t1 NODE_199_length_32030_cov_41.2404 . five_prime_UTR 24978 25008 . + . ID=g9445.t1.utr5p1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . five_prime_UTR 25235 25271 . + . ID=g9445.t1.utr5p2;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . exon 24978 25008 . + . ID=g9445.t1.exon1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . exon 25235 25426 . + . ID=g9445.t1.exon2;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . CDS 25272 25426 . + 0 ID=cds.g9445.t1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . exon 25796 25868 . + . ID=g9445.t1.exon3;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . CDS 25796 25868 . + 1 ID=cds.g9445.t1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . exon 26388 26564 . + . ID=g9445.t1.exon4;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . CDS 26388 26564 . + 0 ID=cds.g9445.t1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . exon 26930 27050 . + . ID=g9445.t1.exon5;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . CDS 26930 26992 . + 0 ID=cds.g9445.t1;Parent=g9445.t1 NODE_199_length_32030_cov_41.2404 . three_prime_UTR 26993 27050 . + . ID=g9445.t1.utr3p1;Parent=g9445.t1 #PROT g9445.t1 g9445 MSKNTSSNAYRKVDVDIYDENRFTEDEVAAGDADQMGAVTAKEGQVRSLLNGGKNEEALKVAIKDPPVHSNDQAVKDKAFNAVFSVLTAVKTNDIPTLVKNLSDAEIDILVKYVYKGMEKATDGTSGVLLAWHEKLTDAGGLGSIIRAMSDRNHV* # ORIGINAL: g9444.t1 original gene structure, not modified by PASA NODE_199_length_32030_cov_41.2404 AUGUSTUS gene 20063 24577 . + . ID=g9444;Name=g9444.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS mRNA 20063 24577 . + . ID=g9444.t1;Parent=g9444;Name=g9444.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS exon 20063 24577 . + . ID=g9444.t1.exon1;Parent=g9444.t1 NODE_199_length_32030_cov_41.2404 AUGUSTUS CDS 20063 24577 . + 0 ID=cds.g9444.t1;Parent=g9444.t1 #PROT g9444.t1 g9444 MKNNKVHPLAGGLHAEQHHAASSQQVKAHPTGWISPSDKLGNVSLASDGEDWPELVLPASACSLAGGIHRDAVRKQNAAQWLEVPIFISSTFLDMSEERDVISTRVFRRLEGQLQDEGYRIKLREIDLRWGITHEETEKGLGVEICLELVGMCRPFFVGLLGQRYGWRPRCESYGITQLDSPLFAPWLPSFPTDRSVTELEMFLATCPYTNADGTKSIPHANIYERDPSFIDSDAFRRDADANPSLRTMYQQEPEMVTILKNRLERQRNIHVKRYGCTWKDGRPQLETDEGGASSLASSLSRARSDSVGPLDKMLFDDVGGAIRAYFGPPNGVALTDPVERARLDHLAFAEEHSAMFQGRDDDMRALVAFATRGEGVRGVAVDDDSGAGASSRIVALQGRPGMGKSAVVARLVTILREKEMSTNELRTVFHFVGPVTGSSSIRAMLPRLCWEVKMAARLEDVVIDATFVQIANKRTFHHIVEEAGRKMTELKQTLVVVIDALNQLDVSDDAHDLWWMPRTIPPGVLFVISSLEGDCMDELRRRPDVTLQMLDALSDAHRRGLVKSLLGSYGKRLTDGDLDLVVGKKSAGIPLYLFLACEEIRLFGAYGDKGAAVTARIEELSDELPGLLSQVLGRLERQHGVDVVTDVLCLLCCSRHGLSVDELRSLAASRGGETSIPSHVWYGLEVSLRPFLKRSSLDGGVQLLGFFHRQLVLAVRERYLRPCRERCAVYRLGDTCAHLAVVAADDAVTLALHSRMAIEFLSKKTEGWRGTSLRAMTESLHHLIVCADAPTVAALLTDIEYIDARAMLGNARGLTDDFVRARAICDRALYPDLPLFDQFFLARAHVFSKQCHPGGVINVALNMPDGTVLSACAERAVSRKISAPAELFRQLHKPKRQTDTCIAVLEGHTNPLEACTFVPGGTQLVTAAADRTARVWDISTGKCTMTLEGHSHWLEGCSLAPDAVTLATGSDDATIRIWNIATGQTIKVIEEHSQPVTCCSFSPDGTLLAATSEDGTVRLWETSTWASVAKMEGHDGEVWSCAFSPDGKVLASASSDSTVRLWSVSAHEYIATLSAHSDTVRSCVFSNDGRILATASEDESIRIWDAETREVLAVVNGHTGAVQSCTFSHDDALLATGSDDQTARVWKVGSWEPLAVLEGHSDMVKACRFSHDNRTLATAAHDKTARLWDVSSIRDGGYATVPDGHTGSAWSCAYSPDGGMLASVSVDRTLRLWDVTKGQMRSVLTGHTATIWACDYSPDGSAIVTSSGDRTARVWDANSGNVLLVLDKHGASVQSCAFSPLGDVIATGSDDKLVHLWNSKTGEIVQTLEGHTEPIRWCAFSPNGGIIATSARDMTVRLWSVASGDALAVLEGHSQSVRWCDFSPDGKLLASASFDKTVRVWDVGSKSLLATFDGSVACFLDATRLLVLKGDHLQKDCATVYAFSGGDGATMFSVAGGYNFPYNVNHVAVHRRKNNSSQSVQEGRVPLAACCGRFVLFYDVESF* # PASA_UPDATE: g13070.t1, single gene model update, valid-1, status:[pasa:asmbl_620,status:12], valid-1 NODE_1167_length_13405_cov_40.1512 . gene 2288 8730 . + . ID=g13070;Name=g13070.t1 NODE_1167_length_13405_cov_40.1512 . mRNA 2288 8730 . + . ID=g13070.t1;Parent=g13070;Name=g13070.t1 NODE_1167_length_13405_cov_40.1512 . five_prime_UTR 2288 2357 . + . ID=g13070.t1.utr5p1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 2288 2481 . + . ID=g13070.t1.exon1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 2358 2481 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 2704 2781 . + . ID=g13070.t1.exon2;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 2704 2781 . + 2 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 2935 3017 . + . ID=g13070.t1.exon3;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 2935 3017 . + 2 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 3310 3459 . + . ID=g13070.t1.exon4;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 3310 3459 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 3715 3959 . + . ID=g13070.t1.exon5;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 3715 3959 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 4259 4368 . + . ID=g13070.t1.exon6;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 4259 4368 . + 1 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 4612 4736 . + . ID=g13070.t1.exon7;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 4612 4736 . + 2 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 5016 5090 . + . ID=g13070.t1.exon8;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 5016 5090 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 5344 5491 . + . ID=g13070.t1.exon9;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 5344 5491 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 5992 6065 . + . ID=g13070.t1.exon10;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 5992 6065 . + 2 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 6463 6600 . + . ID=g13070.t1.exon11;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 6463 6600 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 6802 6987 . + . ID=g13070.t1.exon12;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 6802 6987 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 7217 7331 . + . ID=g13070.t1.exon13;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 7217 7331 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 7698 7822 . + . ID=g13070.t1.exon14;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 7698 7822 . + 2 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 8073 8186 . + . ID=g13070.t1.exon15;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 8073 8186 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 8354 8446 . + . ID=g13070.t1.exon16;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 8354 8446 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . exon 8620 8730 . + . ID=g13070.t1.exon17;Parent=g13070.t1 NODE_1167_length_13405_cov_40.1512 . CDS 8620 8730 . + 0 ID=cds.g13070.t1;Parent=g13070.t1 #PROT g13070.t1 g13070 MASLVRSAFARLGATTGRSTVVATSAALGVHPVRRAVVGTLAGPSVRILHSAQFSSTSVVRDEEKARGPVVKREFQAETSKLLDIVAKSLYSEQEVFVRELVSNASDALEKLRHLQLTGVSIADPDVPLEIRVATDTDAKTIMVQDTGIGMTEEELVSHLGTIARSGSKAFIERLSESGGPASSAKENIIGQFGVGFYSAFMVASKVTVYSRSALDGSKGYMWTSDGTGSYEIAEADNVARGTKIVMHLKAESDRFADKKEIDAVLKRYSNFVGYPIVLNGERVNTLDPLWMVDPKTITDQQHSDFYRFISNAFDEPQFRLHYSADAPLQIRSLFYIPTTHMEKFGLGRTDPGVSLYSRKVLIQPKMKGLLPEWMRFVKGVVDSPDVPLNLSRELLQDSRLIRKLGDVIAGRVIRFLSDQAKVEPEKYDTFAREFSNFLKEGVCTDDSNKAGIAKLLRFESSATESGKITSFADYVTRMHAEQKDIYYLCVPNRTLAENSPYFETLKRKGVEVLFLYEPVDDIAMNNLREFDGKPLVSIESSKIDVAAIKDKDGASSDDQAAAAGALSDDEAKDLGDWLKQALGEERVAEVKVSTRLVNFPIIVTDHESASYRRILKMVDTTRAGFLPPQVLEINKAHPVMTGLHKAKEVNADFAKIIAEQLYDNALVTAGLLDDPRSMLGRLNEIMRRALDGTKAN* # ORIGINAL: g13071.t1 original gene structure, not modified by PASA NODE_1167_length_13405_cov_40.1512 AUGUSTUS gene 9224 10953 . + . ID=g13071;Name=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS mRNA 9224 10953 . + . ID=g13071.t1;Parent=g13071;Name=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 9224 9620 . + . ID=g13071.t1.exon1;Parent=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 9224 9620 . + 0 ID=cds.g13071.t1;Parent=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 9790 10290 . + . ID=g13071.t1.exon2;Parent=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 9790 10290 . + 2 ID=cds.g13071.t1;Parent=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 10457 10953 . + . ID=g13071.t1.exon3;Parent=g13071.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 10457 10953 . + 2 ID=cds.g13071.t1;Parent=g13071.t1 #PROT g13071.t1 g13071 MGSNRRRISEGRTSLPHCKASQSSTDDDVLVDSTMMKGSFSSHYYYSVVCDFLRRILLGGNENDLDAPSQGCADQEAQESVAPWDPTSNTLGDSSSQDEVDRRYAGLIACLKEKGMADAVDNDDDTVTENLVGLVAASFGNAARKLGLRDRRCARAFLRRLTRRLNLSSVVLVLGMLYVERVVARSKSASSAGVGHSSDRSQLFRRKIAFRSTNEIVLGAMLTASKFYLDDGDELLWDNEAWADAAGLSLSVVNDIERVFCGAIDYSFHVDSRLYLDYIEELESRMVKREVVRRAAIGRASIAAFHSFGYHDVCVLVFAGGLASSRSRGLAAALPPAYSQSPGLAVHLFVRFVVRWAIVYLVVVALSYALMVSCRSAFKDGGYVRAVVAASAYSVMAPPAVCDKASANECVMKCGRECAPVHVTPPWSCTGERTPPLGHHGLRSHPHVTPRSRDHVTVMAPAKI* # ORIGINAL: g13069.t1 original gene structure, not modified by PASA NODE_1167_length_13405_cov_40.1512 AUGUSTUS gene 663 1710 . - . ID=g13069;Name=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS mRNA 663 1710 . - . ID=g13069.t1;Parent=g13069;Name=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 1687 1710 . - . ID=g13069.t1.exon1;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 1687 1710 . - 0 ID=cds.g13069.t1;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 1167 1448 . - . ID=g13069.t1.exon2;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 1167 1448 . - 0 ID=cds.g13069.t1;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 847 992 . - . ID=g13069.t1.exon3;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 847 992 . - 0 ID=cds.g13069.t1;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS exon 663 702 . - . ID=g13069.t1.exon4;Parent=g13069.t1 NODE_1167_length_13405_cov_40.1512 AUGUSTUS CDS 663 702 . - 1 ID=cds.g13069.t1;Parent=g13069.t1 #PROT g13069.t1 g13069 MDEDARDDRHASTSRHAAGSFIARKLSTGSMAEHRVNQDGASHSTAKIAADGALEGVLHRKIVMETGRTSQMRAWKTYWCVQRENSLQHFRDDGGKMDAKIKSPLQSIDLKHSSAEIAYGYRKRPYVFTLTTADGSQSLYQASSQEDMLLWIEKLQGASVQKDE # PASA_UPDATE: g13072.t1, single gene model update, valid-1, status:[pasa:asmbl_621,status:12],[pasa:asmbl_622,status:12], valid-1 NODE_1167_length_13405_cov_40.1512 . gene 11069 13281 . - . ID=g13072;Name=g13072.t1 NODE_1167_length_13405_cov_40.1512 . mRNA 11069 13281 . - . ID=g13072.t1;Parent=g13072;Name=g13072.t1 NODE_1167_length_13405_cov_40.1512 . five_prime_UTR 13278 13281 . - . ID=g13072.t1.utr5p1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 13227 13281 . - . ID=g13072.t1.exon1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 13227 13277 . - 0 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 13021 13059 . - . ID=g13072.t1.exon2;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 13021 13059 . - 0 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 12664 12731 . - . ID=g13072.t1.exon3;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 12664 12731 . - 0 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 12374 12482 . - . ID=g13072.t1.exon4;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 12374 12482 . - 1 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 11900 12027 . - . ID=g13072.t1.exon5;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 11900 12027 . - 0 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . exon 11069 11674 . - . ID=g13072.t1.exon6;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . CDS 11461 11674 . - 1 ID=cds.g13072.t1;Parent=g13072.t1 NODE_1167_length_13405_cov_40.1512 . three_prime_UTR 11069 11460 . - . ID=g13072.t1.utr3p1;Parent=g13072.t1 #PROT g13072.t1 g13072 MEYLHSARPPILHLDLKSPNLLIDDKMRLKVADFGLSTLKTGAAGTGHGTLLWMSPEIMRGKGEITEKTDVYSKGIILWELMARSLPYTYYDIVGDFEIRNFIEKITVHMERPSPIPTTLPPAYADLMRQCWSDNPVHRPMFSEISVRLAAMTPDAHWEEPELVIARPSCGKGSGQEKSTYSNRLMPADENADRLSEDALSC* # PASA_UPDATE: g388.t1, single gene model update, valid-1, status:[pasa:asmbl_4744,status:12], valid-1 NODE_2660_length_5532_cov_39.1072 . gene 4333 5434 . + . ID=g388;Name=g388.t1 NODE_2660_length_5532_cov_39.1072 . mRNA 4333 5434 . + . ID=g388.t1;Parent=g388;Name=g388.t1 NODE_2660_length_5532_cov_39.1072 . five_prime_UTR 4333 4459 . + . ID=g388.t1.utr5p1;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . exon 4333 4532 . + . ID=g388.t1.exon1;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . CDS 4460 4532 . + 0 ID=cds.g388.t1;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . exon 4735 5012 . + . ID=g388.t1.exon2;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . CDS 4735 5012 . + 2 ID=cds.g388.t1;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . exon 5174 5434 . + . ID=g388.t1.exon3;Parent=g388.t1 NODE_2660_length_5532_cov_39.1072 . CDS 5174 5434 . + 0 ID=cds.g388.t1;Parent=g388.t1 #PROT g388.t1 g388 MNAPEWRVLAVLVLFAAAHHGLARECSPPNGDYILRIKTQAELNTMSDCTIFVGDLVLGNDSLSDGKYNYDIVSLEPLANLTRIIGDGAIELRYLRGITNVDGLRNLEYVADNVEIMDTGLTNVDGLSGKLSYIGQELRVYFNEYLTNLDGFVYTTMVGDEISIQGNSKLVNVDGVWFNTVSFVLLRTNRILTHTPRITHTLS* # PASA_UPDATE: g386.t1, single gene model update, valid-1, status:[pasa:asmbl_4740,status:12], valid-1 NODE_2660_length_5532_cov_39.1072 . gene 96 2113 . - . ID=g386;Name=g386.t1 NODE_2660_length_5532_cov_39.1072 . mRNA 96 2113 . - . ID=g386.t1;Parent=g386;Name=g386.t1 NODE_2660_length_5532_cov_39.1072 . five_prime_UTR 2027 2113 . - . ID=g386.t1.utr5p1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 1981 2113 . - . ID=g386.t1.exon1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 1981 2026 . - 0 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 1708 1777 . - . ID=g386.t1.exon2;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 1708 1777 . - 2 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 1462 1552 . - . ID=g386.t1.exon3;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 1462 1552 . - 1 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 1090 1206 . - . ID=g386.t1.exon4;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 1090 1206 . - 0 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 714 812 . - . ID=g386.t1.exon5;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 714 812 . - 0 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 535 576 . - . ID=g386.t1.exon6;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 535 576 . - 0 ID=cds.g386.t1;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . exon 96 245 . - . ID=g386.t1.exon7;Parent=g386.t1 NODE_2660_length_5532_cov_39.1072 . CDS 96 245 . - 0 ID=cds.g386.t1;Parent=g386.t1;3_prime_partial=true #PROT g386.t1 g386 MADEVARRPRTIFTRGRPPWYSLDGQLKEAFVIGVAGGSASGKTTVAERIIEELQVPWVVLLSMDSFYKELSGEEIERAHRNEYNFDHPDAFDIDLVVATLQKLKEGKNAEIPVYDFATHSRLPIKRTVYGANVVIFEGILAFARPDLRDQMDMLLFVDTDSDIRLSRRLRRDICERARDLRGVLKQYNKFVKPAFDEFIAPTMR # PASA_UPDATE: g387.t1, single gene model update, valid-1, status:[pasa:asmbl_4741,status:3], valid-1 NODE_2660_length_5532_cov_39.1072 . gene 2475 4125 . - . ID=g387;Name=g387.t1 NODE_2660_length_5532_cov_39.1072 . mRNA 2475 4125 . - . ID=g387.t1;Parent=g387;Name=g387.t1 NODE_2660_length_5532_cov_39.1072 . five_prime_UTR 4046 4125 . - . ID=g387.t1.utr5p1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . exon 3953 4125 . - . ID=g387.t1.exon1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . CDS 3953 4045 . - 0 ID=cds.g387.t1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . exon 3656 3754 . - . ID=g387.t1.exon2;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . CDS 3656 3754 . - 0 ID=cds.g387.t1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . exon 3349 3517 . - . ID=g387.t1.exon3;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . CDS 3349 3517 . - 0 ID=cds.g387.t1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . exon 3171 3226 . - . ID=g387.t1.exon4;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . CDS 3171 3226 . - 2 ID=cds.g387.t1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . exon 2475 3009 . - . ID=g387.t1.exon5;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . CDS 2869 3009 . - 0 ID=cds.g387.t1;Parent=g387.t1 NODE_2660_length_5532_cov_39.1072 . three_prime_UTR 2475 2868 . - . ID=g387.t1.utr3p1;Parent=g387.t1 #PROT g387.t1 g387 MAGNLGARVYFVAVGALRHTTQPSLLVARRQFATATATGPRWEKIEITGNATGMKTTTKAKNHEIVTDEPSKLGGTDSAATPLQTLLASLIGCEHATAMFLAKKRRVEIKSIEFSAEAEYDLRSFMGVEGVPARFQRLKLRGTVDSPMSQHEIDAFMTDVGVRCPVASLMHDAGVEMDVKFLKKE* # PASA_UPDATE: g5081.t1, single gene model update, valid-1, status:[pasa:asmbl_6804,status:12],[pasa:asmbl_6808,status:12], valid-1 NODE_399_length_24708_cov_43.4214 . gene 8609 10402 . + . ID=g5081;Name=g5081.t1 NODE_399_length_24708_cov_43.4214 . mRNA 8609 10402 . + . ID=g5081.t1;Parent=g5081;Name=g5081.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 8609 8830 . + . ID=g5081.t1.utr5p1;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 9222 9235 . + . ID=g5081.t1.utr5p2;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . exon 8609 8830 . + . ID=g5081.t1.exon1;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . exon 9222 9319 . + . ID=g5081.t1.exon2;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . CDS 9236 9319 . + 0 ID=cds.g5081.t1;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . exon 9674 10402 . + . ID=g5081.t1.exon3;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . CDS 9674 9868 . + 0 ID=cds.g5081.t1;Parent=g5081.t1 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 9869 10402 . + . ID=g5081.t1.utr3p1;Parent=g5081.t1 #PROT g5081.t1 g5081 MVKLSLRICGPKCSACCAVLSVWGIIMLFILGILFNKDAYGLREDSGDMSATAKNCYIAGGLYIVCLALSLCQRWLNNRQQGAAPYIPQEDV* # PASA_UPDATE: g5083.t1, single gene model update, valid-1, status:[pasa:asmbl_6810,status:3], valid-1 NODE_399_length_24708_cov_43.4214 . gene 17475 22199 . + . ID=g5083;Name=g5083.t1 NODE_399_length_24708_cov_43.4214 . mRNA 17475 22199 . + . ID=g5083.t1;Parent=g5083;Name=g5083.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 17475 17517 . + . ID=g5083.t1.utr5p1;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 17673 17728 . + . ID=g5083.t1.utr5p2;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 18388 18913 . + . ID=g5083.t1.utr5p3;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . exon 17475 17517 . + . ID=g5083.t1.exon1;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . exon 17673 17728 . + . ID=g5083.t1.exon2;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . exon 18388 19229 . + . ID=g5083.t1.exon3;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . CDS 18914 19229 . + 0 ID=cds.g5083.t1;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . exon 19417 20365 . + . ID=g5083.t1.exon4;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . CDS 19417 20365 . + 2 ID=cds.g5083.t1;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . exon 20732 22199 . + . ID=g5083.t1.exon5;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . CDS 20732 21692 . + 1 ID=cds.g5083.t1;Parent=g5083.t1 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 21693 22199 . + . ID=g5083.t1.utr3p1;Parent=g5083.t1 #PROT g5083.t1 g5083 MRGSAGISRHDASCGSTISPGKADNNHHTLLSLSSSDVVLGEEVATVEVDGARAAIENCTACIDTEALFGAKKAAREALNQMGVTAADAPISGAPVSQDTDSAAPAICTTADSVQEGAVTIPQLLSPGSATERGHQYLESDTKCAAVKSVDLESERPADSESDGRREQAASMLRRLSESPGATINSSAAIDDHAAAIALVEHADNSTPSVVTPAVYVTHGADGVDGVDEPSSLHPNAGIAVTTGAMGAGNASTIRPIRTLKLASGRYSPMAVGPATTTATAATTTIAVAESPSSAPAEDTIDEGERPFNCDRCRRSFKLKHHLARHVKSPYACTFSLAMATGTSLEEAKRMRDAAIGMAASGKRAGDARAAAAAALLGAQIAPGRQGPDGHVVGVGRAGQYDAQSREAGPFKGMQQWDPSGRSMMDPYGRMAAEQQAMWHYHGGGYGYNPSVHIGQMHPGSMHPPHMSGAIPSTYAQQHSMHQLHHGYASGGMQRPAQGGLSASASAVAFQSHGAYAGYSPYGRPYPMTSDGYPMMQQQYQQQHPGSMRASDGLSETDLARSTNSHASAGSAVGDAVGVSEGGDQGLDGSDSDRQQQQQQQQQQQQQRQQQQQQQQQQHQQMQMQPRMDGMGMGVSRFAHSQNGVSDSQRSMGSYVPPSQYYWPYANAQQQQQQQQQGQQGQTAAVNRENTTPVADVSMVRAAPEGVNGYAGAYAHHYGPYPPAMGVSGNPANINVNAQYQ* # PASA_UPDATE: g5080.t1, single gene model update, valid-1, status:[pasa:asmbl_6807,status:3], valid-1 NODE_399_length_24708_cov_43.4214 . gene 5337 8084 . + . ID=g5080;Name=g5080.t1 NODE_399_length_24708_cov_43.4214 . mRNA 5337 8084 . + . ID=g5080.t1;Parent=g5080;Name=g5080.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 5337 5491 . + . ID=g5080.t1.utr5p1;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . exon 5337 6993 . + . ID=g5080.t1.exon1;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . CDS 5492 6993 . + 0 ID=cds.g5080.t1;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . exon 7222 7543 . + . ID=g5080.t1.exon2;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . CDS 7222 7513 . + 1 ID=cds.g5080.t1;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . exon 7663 8084 . + . ID=g5080.t1.exon3;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 7514 7543 . + . ID=g5080.t1.utr3p1;Parent=g5080.t1 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 7663 8084 . + . ID=g5080.t1.utr3p2;Parent=g5080.t1 #PROT g5080.t1 g5080 MSTTTASLGNNINLPQAPIASSYLGSGYVSATPTTSFIPFASSAMNLPGQLQDSSLAQYPGVPGMSYGQMGGGGSFPMGGSMYQVQYPGSDKPAIGMMQMPPSAGQGVPFGLGGISGGASAAPGGPAADKSGKANRPFRCEVCFATFKQRYHLIRHRRGPRACQMRAIQQEKSREEQAVVNGVDSARGGRVAPGKARPQPAIAVAPDEGDGKRYQCLTCDRRFKHRHHLLRHIRSPYGCTFYSTSKAASGDVDGSSGSASDLRLTGVSANGGNAPLVGGNGGDRGQPDLFRVPQSQGGNIHPQSMPPQPRSFPQPPPGMPYVSMHDLEHQSLMGGRGNFLGQQQDFGYMGDSIMPGQIGGMGYMQQRQLNDTMHQIPSLQMDGRQMYGPVVVPPFPGTNGNDYGAMRHQQSIQQQLAALQQQQQQQQQHQQQQKMMDDRQYQQQAYARQGGARHGSFGVVPREGDSTSSLHSMGTDSDGLSHFSSQRSMQGQQQPQGSFGRHASGMEGGFEKPAAAASAPFGNGRMISNPVYRMLADSNLKTAGSGNGRGPFDGNAQMGGDRVDPNAVNGVYDARRFEENPAFHSPEMRVPSVQEKV* # PASA_UPDATE: novel_model_18_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_6805,status:3], valid-1 NODE_399_length_24708_cov_43.4214 . gene 15853 16365 . + . ID=novel_gene_18_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_399_length_24708_cov_43.4214 . mRNA 15853 16365 . + . ID=novel_model_18_5b6be656;Parent=novel_gene_18_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_399_length_24708_cov_43.4214 . five_prime_UTR 15853 15991 . + . ID=novel_model_18_5b6be656.utr5p1;Parent=novel_model_18_5b6be656 NODE_399_length_24708_cov_43.4214 . exon 15853 16365 . + . ID=novel_model_18_5b6be656.exon1;Parent=novel_model_18_5b6be656 NODE_399_length_24708_cov_43.4214 . CDS 15992 16315 . + 0 ID=cds.novel_model_18_5b6be656;Parent=novel_model_18_5b6be656 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 16316 16365 . + . ID=novel_model_18_5b6be656.utr3p1;Parent=novel_model_18_5b6be656 #PROT novel_model_18_5b6be656 novel_gene_18_5b6be656 MTPDNTAAGGTTASIDGASSVLPPRSMALSRSIQCGEVTLRHDHRRAADPVRSVSGMTRPPRRRQFGRQCGEYKIKTWSLGYLGQLSGQITAAESAGTFRQLTAAIE* # ORIGINAL: g5079.t1 original gene structure, not modified by PASA NODE_399_length_24708_cov_43.4214 AUGUSTUS gene 229 1847 . - . ID=g5079;Name=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS mRNA 229 1847 . - . ID=g5079.t1;Parent=g5079;Name=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 1814 1847 . - . ID=g5079.t1.exon1;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 1814 1847 . - 0 ID=cds.g5079.t1;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 1467 1597 . - . ID=g5079.t1.exon2;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 1467 1597 . - 2 ID=cds.g5079.t1;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 1090 1207 . - . ID=g5079.t1.exon3;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 1090 1207 . - 0 ID=cds.g5079.t1;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 557 728 . - . ID=g5079.t1.exon4;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 557 728 . - 2 ID=cds.g5079.t1;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 229 283 . - . ID=g5079.t1.exon5;Parent=g5079.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 229 283 . - 1 ID=cds.g5079.t1;Parent=g5079.t1 #PROT g5079.t1 g5079 MERATKRNFKTQEFAAHGGAVTCLQFGRKSGRVFVTGGDDRMVNLWLVGQQACRLHLSGHASAIESVCFDSEETSVVAGSATGAIKMWDIEQAKAVRTYAAHKSHCKCVDFHPYGAFFASGCVDSTLKLWDVRRASPVHTYYNHGHSLNVIRFSPDGRWIALGAEDGVVR # ORIGINAL: g5084.t1 original gene structure, not modified by PASA NODE_399_length_24708_cov_43.4214 AUGUSTUS gene 22905 24644 . - . ID=g5084;Name=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS mRNA 22905 24644 . - . ID=g5084.t1;Parent=g5084;Name=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 24522 24644 . - . ID=g5084.t1.exon1;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 24522 24644 . - 0 ID=cds.g5084.t1;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 23511 23576 . - . ID=g5084.t1.exon2;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 23511 23576 . - 0 ID=cds.g5084.t1;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 23195 23281 . - . ID=g5084.t1.exon3;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 23195 23281 . - 0 ID=cds.g5084.t1;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS exon 22905 23024 . - . ID=g5084.t1.exon4;Parent=g5084.t1 NODE_399_length_24708_cov_43.4214 AUGUSTUS CDS 22905 23024 . - 0 ID=cds.g5084.t1;Parent=g5084.t1 #PROT g5084.t1 g5084 MRMQMLAYQGATAAQVFILLMIARWLGRRAWSLDLDPDSHVESVVRHAEFKFKEYEYKRTMKNIHAEDYLTTRCVRKCASPSCHAEIYAFDEIEEDEVDIRLISFKGCIVAENAASKATPERDVQTERDDL* # PASA_UPDATE: g5082.t1, single gene model update, valid-1, status:[pasa:asmbl_6809,status:12], valid-1 NODE_399_length_24708_cov_43.4214 . gene 11108 13927 . + . ID=g5082;Name=g5082.t1 NODE_399_length_24708_cov_43.4214 . mRNA 11108 13927 . + . ID=g5082.t1;Parent=g5082;Name=g5082.t1 NODE_399_length_24708_cov_43.4214 . five_prime_UTR 11108 11115 . + . ID=g5082.t1.utr5p1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . exon 11108 11120 . + . ID=g5082.t1.exon1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . CDS 11116 11120 . + 0 ID=cds.g5082.t1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . exon 11217 11291 . + . ID=g5082.t1.exon2;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . CDS 11217 11291 . + 1 ID=cds.g5082.t1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . exon 11457 12101 . + . ID=g5082.t1.exon3;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . CDS 11457 12101 . + 1 ID=cds.g5082.t1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . exon 12247 13054 . + . ID=g5082.t1.exon4;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . CDS 12247 13054 . + 1 ID=cds.g5082.t1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . exon 13499 13927 . + . ID=g5082.t1.exon5;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . CDS 13499 13852 . + 0 ID=cds.g5082.t1;Parent=g5082.t1 NODE_399_length_24708_cov_43.4214 . three_prime_UTR 13853 13927 . + . ID=g5082.t1.utr3p1;Parent=g5082.t1 #PROT g5082.t1 g5082 MASNTLYSAHEVPPNDNGILTGLPVHSSDDALPDQDVLNQFMGQLALLARDKKQAKGFVDSQWLEDWMTNNGTMPAVAEHLYHTYICDALATRDDPTQMLRKKRGAKQERGRGESLTPQQMPLSSLIDNGLSLKEKADILLLFCRRVAACNRVAGNGECNDGNVDDGDTDGDSAANEKVNGYGLSTRTNSNSDNDDTSVDECEKDEHEGVRPAAGDALVDAIFLPEWTKAFAAVKAHIIAYLTLGGDAEMQHLVDDFKAALSHAQPRAAVHSCANRNHKYGFVFQNIKFESRLFGAAGAVFSIALLQLSAVVGATTKCVTSVIKMVEQARNTKKDLGSAMEEVLLNAFTNARNAADSETAKRKRCSSDGDCQDGGSMDRKRPKASSKGRKDPARTAGTCVGSLNDAEYWKTRGGALSQAGFKRTPEAKASVCPLCCSCLCDPRHARHSVKGLQIALLFLMETNPTFCKLASRVLAAYVLVFPARASRFVLATFRNYVSGVRRREDLQFIVQLGTCAMDETSPTAMDGPVPAAVATPAPIRIPATPATTWTTPATPDDAGHVLQYLTADDVDHYLGCAAPQQSPLDVPNGMDFTQCEETGLVDYGNGDDTNVDATGRQCNGTLMRLIPQ* # PASA_UPDATE: g4626.t1, single gene model update, valid-1, status:[pasa:asmbl_3680,status:3], valid-1 NODE_2174_length_7424_cov_40.4828 . gene 291 2758 . - . ID=g4626;Name=g4626.t1 NODE_2174_length_7424_cov_40.4828 . mRNA 291 2758 . - . ID=g4626.t1;Parent=g4626;Name=g4626.t1 NODE_2174_length_7424_cov_40.4828 . five_prime_UTR 2680 2758 . - . ID=g4626.t1.utr5p1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 2610 2758 . - . ID=g4626.t1.exon1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 2610 2679 . - 0 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 2408 2512 . - . ID=g4626.t1.exon2;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 2408 2512 . - 2 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 1574 2257 . - . ID=g4626.t1.exon3;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 1574 2257 . - 2 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 1200 1326 . - . ID=g4626.t1.exon4;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 1200 1326 . - 2 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 800 917 . - . ID=g4626.t1.exon5;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 800 917 . - 1 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . exon 291 617 . - . ID=g4626.t1.exon6;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . CDS 381 617 . - 0 ID=cds.g4626.t1;Parent=g4626.t1 NODE_2174_length_7424_cov_40.4828 . three_prime_UTR 291 380 . - . ID=g4626.t1.utr3p1;Parent=g4626.t1 #PROT g4626.t1 g4626 MVFGRFSFFKKSEKRSHVLLDFPDEVLLHILLYVDAESLGVLARVNFRFNSLCEDSSIWRRIFKTITLEAPVSPSRLGTNWKERCRRAKQLAKCWDALEVKSREVLIGHSDFVSTIAVHNDRVVSGSFDGSISLWSLAPDCQAQSKPNSLAKPATPVDVTVRPRIARGASTSQPQLCIDEAHDDILSRVRFDGNRIISCSRDATIKTWDAETGALLDTLRLHGTSSVRCLQVYGRKMVSGGEDNRVVLFDLDTRQSCELYKHESVVTCVQIDADANVLMSGSRDNTVILYDLVARKEIKVLRGHKDSITCFSFNDEWIVTGSRDKCVRIWSRKHLDLRHVIMHTNWIGSLCLGKTRVFANCIDDGTVCVYSLKTGQRLGSLEPHQKLIRGMHLDAHRLITGSNDGTIAVSVIAGPDVVAPWHDETECQGSASGSKSRTSSMTVNMW* # PASA_UPDATE: g4628.t1, single gene model update, valid-1, status:[pasa:asmbl_3681,status:12], valid-1 NODE_2174_length_7424_cov_40.4828 . gene 6217 7213 . - . ID=g4628;Name=g4628.t1 NODE_2174_length_7424_cov_40.4828 . mRNA 6217 7213 . - . ID=g4628.t1;Parent=g4628;Name=g4628.t1 NODE_2174_length_7424_cov_40.4828 . five_prime_UTR 7189 7213 . - . ID=g4628.t1.utr5p1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . exon 7023 7213 . - . ID=g4628.t1.exon1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . CDS 7023 7188 . - 0 ID=cds.g4628.t1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . exon 6650 6787 . - . ID=g4628.t1.exon2;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . CDS 6650 6787 . - 2 ID=cds.g4628.t1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . exon 6435 6518 . - . ID=g4628.t1.exon3;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . CDS 6435 6518 . - 2 ID=cds.g4628.t1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . exon 6217 6315 . - . ID=g4628.t1.exon4;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . CDS 6248 6315 . - 2 ID=cds.g4628.t1;Parent=g4628.t1 NODE_2174_length_7424_cov_40.4828 . three_prime_UTR 6217 6247 . - . ID=g4628.t1.utr3p1;Parent=g4628.t1 #PROT g4628.t1 g4628 MVRFKNRYVLAEIRLEDGGRLDDSFNSSAFAGLLRDAIQALHGDYGLGCVLHSLSVKYINTTTGLVIVRCARDYYDIVWSAMTFVTLIRKRKCAVTGVHLGGTIRSCQKAAINFNTGELRNLYASAKTPAERERIGALIANVDKDFDGMEV* # ORIGINAL: g4627.t1 original gene structure, not modified by PASA NODE_2174_length_7424_cov_40.4828 AUGUSTUS gene 4953 6116 . + . ID=g4627;Name=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS mRNA 4953 6116 . + . ID=g4627.t1;Parent=g4627;Name=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS exon 4953 5213 . + . ID=g4627.t1.exon1;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS CDS 4953 5213 . + 0 ID=cds.g4627.t1;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS exon 5422 5499 . + . ID=g4627.t1.exon2;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS CDS 5422 5499 . + 0 ID=cds.g4627.t1;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS exon 5706 5838 . + . ID=g4627.t1.exon3;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS CDS 5706 5838 . + 0 ID=cds.g4627.t1;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS exon 6040 6116 . + . ID=g4627.t1.exon4;Parent=g4627.t1 NODE_2174_length_7424_cov_40.4828 AUGUSTUS CDS 6040 6116 . + 2 ID=cds.g4627.t1;Parent=g4627.t1 #PROT g4627.t1 g4627 MSVTPRLFLLLMCGLCXXXXXXXXXVVVVVVVVVAVVVGDTVSTEANFSCAWKSTSDVFAIASQDGTTSVWDVRNLSGPIKRLHAVQPVEIRGACRTVKFSQRGTADLMIYTEHTSVVHIVDARTFDNEHIVRVCADTCDEAISGASISPDGTRIYVATESAILEYNVDVVTRRQFAEGSLI* # ORIGINAL: g13397.t1 original gene structure, not modified by PASA NODE_1986_length_8197_cov_47.7775 AUGUSTUS gene 2830 6577 . + . ID=g13397;Name=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS mRNA 2830 6577 . + . ID=g13397.t1;Parent=g13397;Name=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 2830 2950 . + . ID=g13397.t1.exon1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 2830 2950 . + 0 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 3306 4025 . + . ID=g13397.t1.exon2;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 3306 4025 . + 2 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 4412 4574 . + . ID=g13397.t1.exon3;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 4412 4574 . + 2 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 4867 5161 . + . ID=g13397.t1.exon4;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 4867 5161 . + 1 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 5309 5411 . + . ID=g13397.t1.exon5;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 5309 5411 . + 0 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 5576 5723 . + . ID=g13397.t1.exon6;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 5576 5723 . + 2 ID=cds.g13397.t1;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 6049 6577 . + . ID=g13397.t1.exon7;Parent=g13397.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 6049 6577 . + 1 ID=cds.g13397.t1;Parent=g13397.t1 #PROT g13397.t1 g13397 MPALKGGIQRRRPTVASSAIAIAFAIAIALDCGPISASAGALEDAPTSEKSEWKAKFKSWHTDFVQWATENGCTLGVLPSIPEEWLANSSAVTYDDVIDYFQEARASWAELNPGCTVVCASPDDPGSTTGHCLWNGNRKIPYGARVPAALGDDACATKYMSPPVHGEFGTCACASTADPLGNAVSNPNVTCSWLNGQIPNGYFFPAGSPSSCATGIGAPLNSMDSTMVCSCATLQDLGNSNTDCEWAPGTVPPNAFVADPNYCFFPTSGPVPASGLIRCSPSTNEALPANFFGIISRVPGNWSDGYWAFATGSPEEQAYHYISLAITDNSVNDVRTLYGTTGMSVSVATGWLAAIDSVNMQRRIFKSIPRVLGCDFDICFSKVVEVLSDEFEKVEVLANWQSAINTYLTKLGQTFIDNTGLAADQASAETEGTVTSPSKIANYVMSLLGLLLGVATNFVGTAINCIISVAQSVYSDINDNPSDPYYNDNEAITAAATEVISKINSYVLAFQASVDSRWAACAMNPVQLRYLPATLSTMNSQFQDVDAGIDQLIISQTPVILQRLVRLLFASKWQGCVGNAVTKSNGDVFNTCADTTNDMEKNSIHDIPLGRSYQVYVTNAHSIWHGSRFIWACPNGMYSRGTVPDQSVYGNAGQPGHEESLLTEAIQGTGKDEEEGWSPLTLVLCPSDIHDE* # ORIGINAL: g13396.t1 original gene structure, not modified by PASA NODE_1986_length_8197_cov_47.7775 AUGUSTUS gene 347 1175 . - . ID=g13396;Name=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS mRNA 347 1175 . - . ID=g13396.t1;Parent=g13396;Name=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 1110 1175 . - . ID=g13396.t1.exon1;Parent=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 1110 1175 . - 0 ID=cds.g13396.t1;Parent=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 813 858 . - . ID=g13396.t1.exon2;Parent=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 813 858 . - 0 ID=cds.g13396.t1;Parent=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 347 564 . - . ID=g13396.t1.exon3;Parent=g13396.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 347 564 . - 2 ID=cds.g13396.t1;Parent=g13396.t1 #PROT g13396.t1 g13396 MADDLCECVCNHLGATRRLLQMLTRIQEYCTDTTCLDPLTQARENGVPTDAATTTVMLFFLALIAAVILYMTRPASLRQRPQPTRDANASEKPGPSTGGNRDPPGPSVG* # ORIGINAL: g13398.t1 original gene structure, not modified by PASA NODE_1986_length_8197_cov_47.7775 AUGUSTUS gene 7477 8116 . + . ID=g13398;Name=g13398.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS mRNA 7477 8116 . + . ID=g13398.t1;Parent=g13398;Name=g13398.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 7477 7800 . + . ID=g13398.t1.exon1;Parent=g13398.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 7477 7800 . + 0 ID=cds.g13398.t1;Parent=g13398.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS exon 8006 8116 . + . ID=g13398.t1.exon2;Parent=g13398.t1 NODE_1986_length_8197_cov_47.7775 AUGUSTUS CDS 8006 8116 . + 0 ID=cds.g13398.t1;Parent=g13398.t1 #PROT g13398.t1 g13398 MFAQPPERLLRPLVRAVAARGNISLAAATDALLGGRLSQMGASMNTVAGAPVTPSRGLAVKAAVCLDTSKPLQIVTDHRLDPAGLKAGHVLIDVHTCGVNFADYLMSLGRYQVKPPLPFIPGMEVAGVVRECHPSVKNLAVGDR* # ORIGINAL: g6243.t1 original gene structure, not modified by PASA NODE_189_length_32755_cov_42.31 AUGUSTUS gene 5821 7221 . - . ID=g6243;Name=g6243.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS mRNA 5821 7221 . - . ID=g6243.t1;Parent=g6243;Name=g6243.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 7051 7221 . - . ID=g6243.t1.exon1;Parent=g6243.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 7051 7221 . - 0 ID=cds.g6243.t1;Parent=g6243.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 5821 6609 . - . ID=g6243.t1.exon2;Parent=g6243.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 5821 6609 . - 0 ID=cds.g6243.t1;Parent=g6243.t1 #PROT g6243.t1 g6243 MSIAIFCNIGGATAAIAGQLDTPLSRHGHAQAACVGARLAREKIDAVYSSDLQRAYDSCGIYEGMPWGTEGNAAKALDIRMRDFRPEGGESWIDVRDRLRIALHSIVKREMERVAVGDEHVTVEATAAVADDEENVHTTPSADDCRVLHIVVVTHGGAIKELVSHVVEDLGCAFDLKANTVPHNTSVARMHLRVRRPHHMTCRARGGHSQHTAPSHAHAAQDSRIAHTPALTPAQSEIHVHGDKWYARDGLLVGVVPDSTSPIESVRLLSHNDVGHLAGLTREDDSDDERGHVASGVAALSSADGHAAGESTTGTAQCL* # PASA_UPDATE: g6249.t1, single gene model update, valid-1, status:[pasa:asmbl_2948,status:12], valid-1 NODE_189_length_32755_cov_42.31 . gene 30613 32547 . - . ID=g6249;Name=g6249.t1 NODE_189_length_32755_cov_42.31 . mRNA 30613 32547 . - . ID=g6249.t1;Parent=g6249;Name=g6249.t1 NODE_189_length_32755_cov_42.31 . five_prime_UTR 32465 32547 . - . ID=g6249.t1.utr5p1;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . five_prime_UTR 31846 31884 . - . ID=g6249.t1.utr5p2;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . five_prime_UTR 31399 31413 . - . ID=g6249.t1.utr5p3;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . exon 32465 32547 . - . ID=g6249.t1.exon1;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . exon 31846 31884 . - . ID=g6249.t1.exon2;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . exon 31381 31413 . - . ID=g6249.t1.exon3;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . CDS 31381 31398 . - 0 ID=cds.g6249.t1;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . exon 31133 31181 . - . ID=g6249.t1.exon4;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . CDS 31133 31181 . - 0 ID=cds.g6249.t1;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . exon 30613 30780 . - . ID=g6249.t1.exon5;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . CDS 30704 30780 . - 2 ID=cds.g6249.t1;Parent=g6249.t1 NODE_189_length_32755_cov_42.31 . three_prime_UTR 30613 30703 . - . ID=g6249.t1.utr3p1;Parent=g6249.t1 #PROT g6249.t1 g6249 MTRGSMVGPFQDAAFKLNNSTVGSPVYTDPPIKTQFGYHVIMVEDKK* # PASA_UPDATE: g6244.t1, single gene model update, valid-1, status:[pasa:asmbl_2949,status:3], valid-1 NODE_189_length_32755_cov_42.31 . gene 8188 10719 . + . ID=g6244;Name=g6244.t1 NODE_189_length_32755_cov_42.31 . mRNA 8188 10719 . + . ID=g6244.t1;Parent=g6244;Name=g6244.t1 NODE_189_length_32755_cov_42.31 . five_prime_UTR 8188 8372 . + . ID=g6244.t1.utr5p1;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . exon 8188 9323 . + . ID=g6244.t1.exon1;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . CDS 8373 9323 . + 0 ID=cds.g6244.t1;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . exon 9643 9705 . + . ID=g6244.t1.exon2;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . CDS 9643 9705 . + 0 ID=cds.g6244.t1;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . exon 10111 10719 . + . ID=g6244.t1.exon3;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . CDS 10111 10680 . + 0 ID=cds.g6244.t1;Parent=g6244.t1 NODE_189_length_32755_cov_42.31 . three_prime_UTR 10681 10719 . + . ID=g6244.t1.utr3p1;Parent=g6244.t1 #PROT g6244.t1 g6244 MSAIASLLRRAFSGWGAGKEARVLFLGLDASGRTTALYLMKLGELVQTIPTIGFNVETIECAGMQITAWDVGGCDKIRPLWRHYFQNTTALVFFVDSNDRERLDSLRDEVLSFLNEPELRGLPALFFANKQDLPNALTPAEITVRLNLETLLAGRAWRMFGSTCKDVGTFGDGFQWLVHVLKQPKADGPAPLATAGTGGDGSAGASNVPVAQETAKPSGTQPNSNGNPTQSVDAILERWLSVEDESDDEFLAKFAAYTLDSWDHRTHLRIAWLFLQRHGRREGMRRTFDGIKAFIENSDRARKTTFHESLTYFWVHMVHYALVATPNPLGDFKGFLLMNPRLCNGGLFLENYTKDRLMKDPEARKKVILPDIKPLPSMVGGTAAPRGVSHVPAHMQPRASDSDDAFLRSFEANTLPSWGHVPMLRVCYVYLRGNPRRVALELIFSQMERRMRDAHHVTMTYFWLQMVAFAIASHPACDSFASLLEAVPSLTNAQSYREYYSDDIIFAGTAATQMVLPDKKQLPNVVG* # ORIGINAL: g6247.t1 original gene structure, not modified by PASA NODE_189_length_32755_cov_42.31 AUGUSTUS gene 19289 22898 . - . ID=g6247;Name=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS mRNA 19289 22898 . - . ID=g6247.t1;Parent=g6247;Name=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 21513 22898 . - . ID=g6247.t1.exon1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 21513 22898 . - 0 ID=cds.g6247.t1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 20968 21132 . - . ID=g6247.t1.exon2;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 20968 21132 . - 0 ID=cds.g6247.t1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 20624 20730 . - . ID=g6247.t1.exon3;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 20624 20730 . - 0 ID=cds.g6247.t1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 19964 20216 . - . ID=g6247.t1.exon4;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 19964 20216 . - 1 ID=cds.g6247.t1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 19643 19723 . - . ID=g6247.t1.exon5;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 19643 19723 . - 0 ID=cds.g6247.t1;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 19289 19405 . - . ID=g6247.t1.exon6;Parent=g6247.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 19289 19405 . - 0 ID=cds.g6247.t1;Parent=g6247.t1 #PROT g6247.t1 g6247 METEALTAQRREYLARVGLPSHLHTLALEKLATCDRILTEGQDISFEGWQRFDSDAKNAFSTVECESNGCEHMHHVHRKTTAARDVKALSTVFVLPSVAAYERRDVRRVFGSESAKDPSSADALFGSKAKNAVLAALFSPGVAADHIADSSAIDDFWCLADVLPLEDDGQNNAKQGNPHTDGALKDSSLWCLPPPPFRFARHSDVASIAVALIPSTVASTSHPRLRNASLGIPMYVAWPIADIAAGDDIFRNWMPSPVQSSQRITRLCVRLERCPALWPSLEHAHAYNAVAQSAAGSPLPGSQVDACTLSFAWNQNPSFVAPVDPRIEKGIVAGDIRTLDMSLAARVKGGEQLRVWTDYDRVADSLTDSRFAIVTDPALRDSCDVVVTPAHVKSFVSLGAGQLIFQFPYEASLVRKDILPQTLRAFCRVRSEGSVDTADAVQWQMPPYFLPSYDIATEASGLVQFFVREHDRRCSLGGSSRWIVKPGDQARCIGHFLTSCKAEAARAVERGGEWVAQEYVERPMLLKGRKFDIRFYAIVRSFHTPFEAYLYRGFYTRVADKAYNLSDDTLSDAGMHFTVFNYAAGAAQLFMSAEQTASGVAESTPDADIDWMSQAPSSVFEKVRKLASLLFRGAGHKIGQWPLSRGYYGFDVILSHDGTPHVLEVNYYGDLTRMLNYYPSFVNEMVAALVLNECTADAMAPL* # PASA_UPDATE: g6242.t1, single gene model update, valid-1, status:[pasa:asmbl_2947,status:12], valid-1 NODE_189_length_32755_cov_42.31 . gene 57 4967 . - . ID=g6242;Name=g6242.t1 NODE_189_length_32755_cov_42.31 . mRNA 57 4967 . - . ID=g6242.t1;Parent=g6242;Name=g6242.t1 NODE_189_length_32755_cov_42.31 . five_prime_UTR 4914 4967 . - . ID=g6242.t1.utr5p1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 4852 4967 . - . ID=g6242.t1.exon1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 4852 4913 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 4233 4331 . - . ID=g6242.t1.exon2;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 4233 4331 . - 1 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 4053 4122 . - . ID=g6242.t1.exon3;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 4053 4122 . - 1 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 3424 3609 . - . ID=g6242.t1.exon4;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 3424 3609 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 3194 3271 . - . ID=g6242.t1.exon5;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 3194 3271 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 2968 3003 . - . ID=g6242.t1.exon6;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 2968 3003 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 2632 2833 . - . ID=g6242.t1.exon7;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 2632 2833 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 2418 2510 . - . ID=g6242.t1.exon8;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 2418 2510 . - 2 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 2034 2161 . - . ID=g6242.t1.exon9;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 2034 2161 . - 2 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 1618 1811 . - . ID=g6242.t1.exon10;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 1618 1811 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 1254 1488 . - . ID=g6242.t1.exon11;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 1254 1488 . - 1 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 811 1062 . - . ID=g6242.t1.exon12;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 811 1062 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . exon 57 677 . - . ID=g6242.t1.exon13;Parent=g6242.t1 NODE_189_length_32755_cov_42.31 . CDS 57 677 . - 0 ID=cds.g6242.t1;Parent=g6242.t1 #PROT g6242.t1 g6242 MTPAVGGDAATPEVPRAVLNRLYDEVCAVILSRQHPVTGLLPASTAVTEHGDYRDAWVRDNVYSILAVWGLALAYRKGDDTDGRAYELEQSTVKLMRGLLASMMRQASKVEEFKHTQDRLCCLHAKYDTATGNTVVADNEWGHLQLDATGLFLLYLAQMTLSGLQIIFTRDEVDFVQNLVYYMERAYRTPDFGIWERGNKMNNGMPELNSSSTGIVSAALEAIDGIDLFGSRGNGRTGRIHVLPDEVARNYTTLMSALPRESSSKEIDAALLPVIGFPAFAAGSTVVADKTRGEIVAKLQGRFGCKRFLLDGHQCAVEDPHRLHYEESELKVFESIECEWPLFFCYLALDAQFRGDKKSASEYRTKLLSLGVVRAGPDGQPMRLIPELYFVPAESIDAERSAPSTQERVSNANVPLVWAQSLHVLSELLWADILTPGDLDPVNRRFRLLKPHSVTSAPPIQVVLLCEDARLQSAMLGYGLKTQTLDEVEPVDVHPSSLLRELYAELGRNSKLGLTGRPTRPVGVLGTCRLYRVGGRLCAFTPNFMDREEFYLTSDNDLLVSLFRHEISFVAHNWRGAGRPTVTILLTHAMLGNRKSGQESAGVMALMGDLKSGTLRDGVRVRLCAMQEAVPTSHVVSLDFVSHSVLESMLLKHSPPQMPASSSEPSADTLDAAALSSVDREAYVRSRESSVRRRSVGGPAAVALAYDLENPQELELYFEFLRDTGSIEAQAGSLAKLLVGKVGMFSSKSKS* # ORIGINAL: g6245.t1 original gene structure, not modified by PASA NODE_189_length_32755_cov_42.31 AUGUSTUS gene 11666 13346 . - . ID=g6245;Name=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS mRNA 11666 13346 . - . ID=g6245.t1;Parent=g6245;Name=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 12912 13346 . - . ID=g6245.t1.exon1;Parent=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 12912 13346 . - 0 ID=cds.g6245.t1;Parent=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 12259 12564 . - . ID=g6245.t1.exon2;Parent=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 12259 12564 . - 0 ID=cds.g6245.t1;Parent=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 11666 12001 . - . ID=g6245.t1.exon3;Parent=g6245.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 11666 12001 . - 0 ID=cds.g6245.t1;Parent=g6245.t1 #PROT g6245.t1 g6245 MVEVQADLERQRDQFAQRMRVCAEKQLELRNKQKQIKDRVRKFEKFLKDNDAKRQRANQKYLAEMKLREQKERDYDELVDQQTAMRVNSANVKKTLDVYRKYETYLQRVVESLPEDYLEVPEPQIKDIMMRHKTLSETNDDLVKQVQRYYDEIEHKQGLLGQLIQENSKILMLTNSKLATTQKRLESAKQRTAHLEQMIFEREKAGRKQVREFREIRMAIHNIAERCMRNIGVHQGDTLNEKLATIQERLLDLEAISSIASRDGPIGSADPSHRTPSKAGAKPSKVSSASGQKDKGAAGTAIAANVSVAKDAVADKGVDKGADKGDAGTKDAKAGTDGSAAIKTDDGSPRTKETKPRD* # PASA_UPDATE: g6248.t1, single gene model update, valid-1, status:[pasa:asmbl_2950,status:12], valid-1 NODE_189_length_32755_cov_42.31 . gene 23523 30100 . + . ID=g6248;Name=g6248.t1 NODE_189_length_32755_cov_42.31 . mRNA 23523 30100 . + . ID=g6248.t1;Parent=g6248;Name=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 23523 23648 . + . ID=g6248.t1.exon1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 23523 23648 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 23778 23894 . + . ID=g6248.t1.exon2;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 23778 23894 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 24337 24376 . + . ID=g6248.t1.exon3;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 24337 24376 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 24630 24859 . + . ID=g6248.t1.exon4;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 24630 24859 . + 2 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 25261 25754 . + . ID=g6248.t1.exon5;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 25261 25754 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 26068 26194 . + . ID=g6248.t1.exon6;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 26068 26194 . + 1 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 26543 26635 . + . ID=g6248.t1.exon7;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 26543 26635 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 26904 27069 . + . ID=g6248.t1.exon8;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 26904 27069 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 27194 27261 . + . ID=g6248.t1.exon9;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 27194 27261 . + 2 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 27399 27544 . + . ID=g6248.t1.exon10;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 27399 27544 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 27745 27813 . + . ID=g6248.t1.exon11;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 27745 27813 . + 1 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 28119 28308 . + . ID=g6248.t1.exon12;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 28119 28308 . + 1 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 28423 28519 . + . ID=g6248.t1.exon13;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 28423 28519 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 28626 28758 . + . ID=g6248.t1.exon14;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 28626 28758 . + 2 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 28985 29159 . + . ID=g6248.t1.exon15;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 28985 29159 . + 1 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . exon 29435 30100 . + . ID=g6248.t1.exon16;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . CDS 29435 29782 . + 0 ID=cds.g6248.t1;Parent=g6248.t1 NODE_189_length_32755_cov_42.31 . three_prime_UTR 29783 30100 . + . ID=g6248.t1.utr3p1;Parent=g6248.t1 #PROT g6248.t1 g6248 MNLAPREIDKLLVHHVCALAQKRLARGLKLNLPEATGLIAGQLCEFARDGQSVAVIMDLGKRILGRRHVMAGVPELLEDVQVEATFPDGTKLVTEEGDLHMALYGSFINMDAAATHFTSALETTSGDGVGGLGSQLAPTDAFVGAGEYPGMVVTCRARGPIVINEGSGRTAVGSHYHFIETNRHLVFDRELAYGRRLHIPAGTAVRFEPGETQTVTLVDIGGRRVISGGNSVATGVVNATPQNISAILSRLQADGFGHRKEASAVPRPLQPAVGDSDADGDSGEQASKRRRIDSDAPDATLCRVVVARDRYAAMYGPTTGDRVRLADTCLYVEVERDYTTYGDECKFGGGKVLREGMGQATGVGDDDALDVVMTNALIIDHTGVYKADIGIKKGFIVGIGKAGNPDVMEGVTPGMVVGVTTEAVACEGFIVTAGGVDTHIHFICPQQSSEAIASGVTTMIGGGTGPATGTKATTCTPGAYAIASMLEATDAIPLNFGFTGKGNTSDPRGLEEQVLAGAVGLKLHEDWGTTPAAIDCCLSVAEKYDVQVTIHTDTLNESSNVESTFAAFKGRTIHTYHSEGAGGGHAPDIIRCVGEMSVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDHTIPADVSFAESRIRGETIAAEDILQDMGAISIVSSDSQAMGRVGEVITRTWQTADKMKRQRGPLREDAGSDADNFRVRRYIAKYTINPAVAHGVGHVIGSVEVGKFADLVLWRPAFFGAKPELIIKGGIIAWSQMGDANASIPTPEPVIMRPMFAAHGRATGMSSLAFVSKASVEMNRLPAHLTKRIVPIANCRNLTKKDMRLNDVTPVMTVDPETYEVTADGVLLRCDPAARVPLGQRYFLM* # ORIGINAL: g6246.t1 original gene structure, not modified by PASA NODE_189_length_32755_cov_42.31 AUGUSTUS gene 14821 18739 . - . ID=g6246;Name=g6246.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS mRNA 14821 18739 . - . ID=g6246.t1;Parent=g6246;Name=g6246.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 17521 18739 . - . ID=g6246.t1.exon1;Parent=g6246.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 17521 18739 . - 0 ID=cds.g6246.t1;Parent=g6246.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS exon 14821 17171 . - . ID=g6246.t1.exon2;Parent=g6246.t1 NODE_189_length_32755_cov_42.31 AUGUSTUS CDS 14821 17171 . - 2 ID=cds.g6246.t1;Parent=g6246.t1 #PROT g6246.t1 g6246 MKVLDTLIAIFVLSFALSVLLPSTVCAHPAAPAVMDESDDRADRGPAPGNAVPGHQSSKVLSRPRAPLVDSRSVMGSKGPATGVIRAQTITLPVAPAVPVRKTSGASLRRRSLETASAALTEDMSLGSVMNSAQRRMRVQSLTTATCMSRIAALAGKPTDVVTFLAANTDCCDEFLASFVSTPASFYSSFWAVVSDNRVTSCLFASVSTALETSNSLGLNATYVTRLLADYPGVLSAASRSGVDTSDWQSFFDDNTFWDLFGCPAAPSALSNAQLLESLLYSGESCTDTLASALGDRPAASRDVDVLIANGKNVALEGWSRRNAVRAIGILCVNTSRSSQLVVKTRRTDVISLLDNRVRNEDDEDTLDEAIAVLTRFFLPYLPLLPRLQQLVFSDAFTELLHARAAGSAAVLLKSKPYLEAADITYLLKGINWDEDSVRPLVASGCVDLVLSRKLNGTSYTRVRSAIEAQFASDECFPCSVWMARTLDGFDGRTTKFDSVLSTFLATFLSTTFRQSEITIRTGINDTARLSCLATTMYRQRMAFVDVLGPAFAEPVGNDTNANITLVVFADPDAYSNYMSAFVGYGDTADGVYVESQGLLYTYDRRSTDSELNLNEVVLREYGRYLHGRYVWPGILGAPGYYKEPLGWADLGYGEYWASLNFDNAGRYRSTLRKAFFADNCPVTASAMSLTTLLALRTGYDSGDGFDIFGACTFATYMATYRADATRRIFSSFRRGNYSLSTIANITGVSVAVMQSEWRAAVTSWCGNSSVFDNAPFKAPASGVDAFATCSLIEHGFPTDDTVYDSGATLFGVAFSPSDPDNCRAQTVCALCKVAGGGGKCTWDAGHCIPLLNEACPAPPPNSALNTPSRANVPGAPNANDGNPSTFLYSTSPLWWEGDLLGVFFIETIVVSWRFPPTKFSISITDIATGAPIIVRFQVQPNAPFMSNATCKLDVPLASRFVRVDLLEGFYELAEVSVFVRIPTGDASTVSPGTVTRPTSTPISVALNSVASADVTLPTAQSQPASAPPPPSTVTLTTGAPFVSSGASQPSTPGIPLSSSFSGAASRPASQSVSVSSLTSGSASARPQTSSPSTFVVAPQPTSSPLAVRTSTLETSRGAAPTTAPSASQQRASSPAGASGSTLQPTASSAIPASTSRSTSTSTQPKSSSLGKVNSSSSSGPKASSSRAV* # ORIGINAL: g2231.t1 original gene structure, not modified by PASA NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS gene 1446 2225 . - . ID=g2231;Name=g2231.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS mRNA 1446 2225 . - . ID=g2231.t1;Parent=g2231;Name=g2231.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS exon 2034 2225 . - . ID=g2231.t1.exon1;Parent=g2231.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS CDS 2034 2225 . - 0 ID=cds.g2231.t1;Parent=g2231.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS exon 1446 1724 . - . ID=g2231.t1.exon2;Parent=g2231.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS CDS 1446 1724 . - 0 ID=cds.g2231.t1;Parent=g2231.t1 #PROT g2231.t1 g2231 MKVHDTHSASVFSKSGRRPDLADCPANLPVSAATARFVGELSQSDTSPSKIGELLSAVHSILFTDTPYRTRMFSFLATKDRIAFFLAKKAQTRPDESTVVSTHGFFDLTDKDQHESASRIFASLVIMKEEDSGLYLPEAMLDGVKYSAAEFLGMGA* # ORIGINAL: g2230.t1 original gene structure, not modified by PASA NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS gene 473 1413 . - . ID=g2230;Name=g2230.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS mRNA 473 1413 . - . ID=g2230.t1;Parent=g2230;Name=g2230.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS exon 1119 1413 . - . ID=g2230.t1.exon1;Parent=g2230.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS CDS 1119 1413 . - 0 ID=cds.g2230.t1;Parent=g2230.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS exon 473 798 . - . ID=g2230.t1.exon2;Parent=g2230.t1 NODE_3973_length_2424_cov_50.556_potentialcontaminant AUGUSTUS CDS 473 798 . - 2 ID=cds.g2230.t1;Parent=g2230.t1 #PROT g2230.t1 g2230 MKVTNKADAEVEHELLRSLARANLGCVPVSVGCAHVTGNTYALILTERFVAFVDRASHMVEPFTQEHFVQLLRTLADAHLIGIVHRDLRPANIMRDKNDWNAAAKANVAAPFRGSTRTASSRVLEELERDPEHVIFTASDDMVSAVKTAYLLSHPHINVRLCVISSDDFGGLNTFWTTCLAGVWQSAVALASEGRFAELSVHFLCL* # PASA_UPDATE: g14348.t1, single gene model update, valid-1, status:[pasa:asmbl_3255,status:3], valid-1 NODE_2004_length_8134_cov_43.0109 . gene 416 1613 . - . ID=g14348;Name=g14348.t1 NODE_2004_length_8134_cov_43.0109 . mRNA 416 1613 . - . ID=g14348.t1;Parent=g14348;Name=g14348.t1 NODE_2004_length_8134_cov_43.0109 . five_prime_UTR 1587 1613 . - . ID=g14348.t1.utr5p1;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . exon 1376 1613 . - . ID=g14348.t1.exon1;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . CDS 1376 1586 . - 0 ID=cds.g14348.t1;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . exon 1153 1268 . - . ID=g14348.t1.exon2;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . CDS 1153 1268 . - 2 ID=cds.g14348.t1;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . exon 416 825 . - . ID=g14348.t1.exon3;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . CDS 730 825 . - 0 ID=cds.g14348.t1;Parent=g14348.t1 NODE_2004_length_8134_cov_43.0109 . three_prime_UTR 416 729 . - . ID=g14348.t1.utr3p1;Parent=g14348.t1 #PROT g14348.t1 g14348 MSTIFRRPSFGKSPLKRDSSRASMRGSHDSLNLGINMGPAVLEDNTLPPGAIRVKLGDADLLYEDGIWRTDTVEGGASARELVGLRKQNRQLQEENQLLKYKIELLLDMLAVSNLDNLALEADLESGRQNRPASPRKSIR* # PASA_UPDATE: g14349.t1, single gene model update, valid-1, status:[pasa:asmbl_3257,status:3], valid-1 NODE_2004_length_8134_cov_43.0109 . gene 3473 8032 . + . ID=g14349;Name=g14349.t1 NODE_2004_length_8134_cov_43.0109 . mRNA 3473 8032 . + . ID=g14349.t1;Parent=g14349;Name=g14349.t1 NODE_2004_length_8134_cov_43.0109 . five_prime_UTR 3473 3553 . + . ID=g14349.t1.utr5p1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 3473 3662 . + . ID=g14349.t1.exon1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 3554 3662 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 3801 3847 . + . ID=g14349.t1.exon2;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 3801 3847 . + 2 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 3976 4112 . + . ID=g14349.t1.exon3;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 3976 4112 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 4275 4328 . + . ID=g14349.t1.exon4;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 4275 4328 . + 1 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 4466 4524 . + . ID=g14349.t1.exon5;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 4466 4524 . + 1 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 4768 4868 . + . ID=g14349.t1.exon6;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 4768 4868 . + 2 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 5109 5606 . + . ID=g14349.t1.exon7;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 5109 5606 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 5914 6273 . + . ID=g14349.t1.exon8;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 5914 6273 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 6492 6865 . + . ID=g14349.t1.exon9;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 6492 6865 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 7076 7181 . + . ID=g14349.t1.exon10;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 7076 7181 . + 1 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 7387 7466 . + . ID=g14349.t1.exon11;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 7387 7466 . + 0 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . exon 7693 8032 . + . ID=g14349.t1.exon12;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . CDS 7693 7900 . + 1 ID=cds.g14349.t1;Parent=g14349.t1 NODE_2004_length_8134_cov_43.0109 . three_prime_UTR 7901 8032 . + . ID=g14349.t1.utr3p1;Parent=g14349.t1 #PROT g14349.t1 g14349 MGVAKLATGGRAHSTMSAVDIQRRKHEREIFRQTYAGPTSLYKVLAMRHFLRPSFLARNLTFIPRRVAKSAGDHLRGSQSGKLSSLADGSAASKQAGRTSDLKSCALADKLLDTTRDSLLSSAVRLSVSEISRSWEEKNPFRKNRPADPIRNFCVLSVVLKREGVNPEKDGHLLVGCRLPLATLPLESELVHVIPAGVLSTVASASYALYVTASFPANIVQEEADPDADFLGDDLDLGSCDASTPRDVADWTCDGWLLRRSTRGKGVDSSKRDGASATARRVAKRQADLAEECRRHVDGKGEHVYRCRIALADVDADGDVAFRLSGLVECDVVPLNPDKLPGGLPGAVSLQMHVDWLWGGKRRRLDALSPQSVDDPRFPHLVCDDGRTMPPARQLSGATDSRVFFNFMYSANSLKRTEAQRDKRCPWCAMNCRDVYGLLRHLTLSHSRFIFDYTGADEKGCYIAVSVRGIGNLNDSERRWLATAASGAVQTQHQPIAAHSRGGVLGIIEMDDDAFEFLREDAMAGPDAALLNVSARDPEEFSSSNGTLPNKRRERRRVKGQQLQADVVVSVSTEELLRGRTFYSSRTFLPKRLGDLENDSDDEYDNAWLTVQSNKMMDEFTDVNEGEKEVMKMWNKHILDYGVIGDCQMPAVCDSFIERHGNELIARRLRNNFMLHIVNLAQYGLLKDDAVARIVLAFSKLASKCVASAD* # ORIGINAL: g7504.t1 original gene structure, not modified by PASA NODE_3781_length_2768_cov_37.0691 AUGUSTUS gene 241 2649 . + . ID=g7504;Name=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS mRNA 241 2649 . + . ID=g7504.t1;Parent=g7504;Name=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS exon 241 366 . + . ID=g7504.t1.exon1;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS CDS 241 366 . + 2 ID=cds.g7504.t1;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS exon 822 1027 . + . ID=g7504.t1.exon2;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS CDS 822 1027 . + 2 ID=cds.g7504.t1;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS exon 1564 1740 . + . ID=g7504.t1.exon3;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS CDS 1564 1740 . + 0 ID=cds.g7504.t1;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS exon 1962 2041 . + . ID=g7504.t1.exon4;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS CDS 1962 2041 . + 0 ID=cds.g7504.t1;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS exon 2367 2649 . + . ID=g7504.t1.exon5;Parent=g7504.t1 NODE_3781_length_2768_cov_37.0691 AUGUSTUS CDS 2367 2649 . + 1 ID=cds.g7504.t1;Parent=g7504.t1 #PROT g7504.t1 g7504 VQIASWSFGKLTVDRYRAFIKNDLHGTIAGILSIFDIIALQEVYIEPGDLARLTGDVLQVQQLPADPLYNSAGMVVLFNPNTVRGVGCTKPKWAVPGIVGVVCEWTLSNELLPASIQKGNTVLDPLKTVFVDFNSAMAQKGVDALLKVPTDTEIKSASNIDVLIMGNMMIDTVAASKFPTNKAYVADYVNSLNLNGLGFTSAKIPFPTYINRESTMGWAHGHGSTSLAASLGTAKVLELNYATVNGNYLVDRVKVLIESPKFNVCQWLASSLPIVVKTTAGRLGGLSTV* # PASA_UPDATE: g5342.t1, single gene model update, valid-1, status:[pasa:asmbl_5610,status:12], valid-1 NODE_3135_length_4231_cov_32.7936 . gene 53 4032 . + . ID=g5342;Name=g5342.t1 NODE_3135_length_4231_cov_32.7936 . mRNA 53 4032 . + . ID=g5342.t1;Parent=g5342;Name=g5342.t1 NODE_3135_length_4231_cov_32.7936 . five_prime_UTR 53 54 . + . ID=g5342.t1.utr5p1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 53 396 . + . ID=g5342.t1.exon1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 55 396 . + 0 ID=cds.g5342.t1;Parent=g5342.t1;5_prime_partial=true NODE_3135_length_4231_cov_32.7936 . exon 659 880 . + . ID=g5342.t1.exon2;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 659 880 . + 0 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 1236 1402 . + . ID=g5342.t1.exon3;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 1236 1402 . + 0 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 1521 1609 . + . ID=g5342.t1.exon4;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 1521 1609 . + 1 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 1924 2045 . + . ID=g5342.t1.exon5;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 1924 2045 . + 2 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 2422 2563 . + . ID=g5342.t1.exon6;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 2422 2563 . + 0 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 2893 3107 . + . ID=g5342.t1.exon7;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 2893 3107 . + 2 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 3389 3541 . + . ID=g5342.t1.exon8;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 3389 3541 . + 0 ID=cds.g5342.t1;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . exon 3835 4032 . + . ID=g5342.t1.exon9;Parent=g5342.t1 NODE_3135_length_4231_cov_32.7936 . CDS 3835 4032 . + 0 ID=cds.g5342.t1;Parent=g5342.t1;3_prime_partial=true #PROT g5342.t1 g5342 FCRDELIHHAGSLKEERQALEWYFADVDDLSNLLAKKLWATLGQAMHIIEQQPALLVSVLRIVEREEKLDAIALDPNGERKVDTSKRPKKYRQKCFDTLIHAIDLRFEAFQVDETIESFLAKAGAFIYEDFAKVKLSFAPCFPPHYRIVEYYVGEYHKRLWDIIDGMAARDLEPAEIVALLSWVQNYGVATQRLSIPPAVIDPPLLDGRHDALMDRYISLIRGKMRLWTANILSEEFLEWFENKDRDSAPELNEDGHYGTPAPVILFQMVDQQVAVAFRTKYGPVMFAVAQECTAMLLQYQGAFEEKLTASMREYWRTPEDERPSFIVEYLMAAVNNSAKCKQYAAQLVERVNGEMPAEFRGTCSNQLGEVVDNFVTVATTSQLHLLEMVFHDLDPVFAQLFTKKWHESSHSLSTIIATLEDYFRDFTEHLHQEFLPILLEQCLDEAILRYVTGMCARRGSLQSNVFGDRMKQDADRFAVFFLQSADKFGLAPETVLNRLEILKDLRDLLTDSEDMLPSTFFKLRTEHPDMTFDHVEAMLSQRDDIGKLQ # PASA_UPDATE: g2704.t1, single gene model update, valid-1, status:[pasa:asmbl_9078,status:12], valid-1 NODE_7273_length_453_cov_141.481_potentialcontaminant . gene 2 382 . + . ID=g2704;Name=g2704.t1 NODE_7273_length_453_cov_141.481_potentialcontaminant . mRNA 2 382 . + . ID=g2704.t1;Parent=g2704;Name=g2704.t1 NODE_7273_length_453_cov_141.481_potentialcontaminant . five_prime_UTR 2 3 . + . ID=g2704.t1.utr5p1;Parent=g2704.t1 NODE_7273_length_453_cov_141.481_potentialcontaminant . exon 2 382 . + . ID=g2704.t1.exon1;Parent=g2704.t1 NODE_7273_length_453_cov_141.481_potentialcontaminant . CDS 4 294 . + 0 ID=cds.g2704.t1;Parent=g2704.t1;5_prime_partial=true NODE_7273_length_453_cov_141.481_potentialcontaminant . three_prime_UTR 295 382 . + . ID=g2704.t1.utr3p1;Parent=g2704.t1 #PROT g2704.t1 g2704 NPAWTDWLSTATRITRFHWYLEISTGLTNAIFFIALAAVLLVLMNAGYVGVAFSRRKPMNMILVRTLLRDVTLRHCALPASDRYLQCALFVQLGPS* # ORIGINAL: g2760.t1 original gene structure, not modified by PASA NODE_7825_length_405_cov_1.23939_potentialcontaminant AUGUSTUS gene 2 405 . + . ID=g2760;Name=g2760.t1 NODE_7825_length_405_cov_1.23939_potentialcontaminant AUGUSTUS mRNA 2 405 . + . ID=g2760.t1;Parent=g2760;Name=g2760.t1 NODE_7825_length_405_cov_1.23939_potentialcontaminant AUGUSTUS exon 2 405 . + . ID=g2760.t1.exon1;Parent=g2760.t1 NODE_7825_length_405_cov_1.23939_potentialcontaminant AUGUSTUS CDS 2 405 . + 0 ID=cds.g2760.t1;Parent=g2760.t1 #PROT g2760.t1 g2760 DNVGVVLFGNDRGIKEGDVAKRTGAIVDTPVGKELLGRVVDALGNPIDGKGPLKAKERRRVDVKAPGILPRKSVHEPMSTGLKAIDALIPIGRGQRELIIGDRQTGKTAVILDTFLNQKPAHASGASETDKLYC # PASA_UPDATE: g3099.t1, single gene model update, valid-1, status:[pasa:asmbl_7171,status:12], valid-1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . gene 952 1874 . + . ID=g3099;Name=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . mRNA 952 1874 . + . ID=g3099.t1;Parent=g3099;Name=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . five_prime_UTR 952 1056 . + . ID=g3099.t1.utr5p1;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . exon 952 1285 . + . ID=g3099.t1.exon1;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . CDS 1057 1285 . + 0 ID=cds.g3099.t1;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . exon 1368 1397 . + . ID=g3099.t1.exon2;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . CDS 1368 1397 . + 2 ID=cds.g3099.t1;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . exon 1720 1874 . + . ID=g3099.t1.exon3;Parent=g3099.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . CDS 1720 1874 . + 2 ID=cds.g3099.t1;Parent=g3099.t1;3_prime_partial=true #PROT g3099.t1 g3099 MASSEPSRPELWTVDNVQAWVRSVLNEPPAMPINSIQDTADHVASSLIDGPMLCVLGENEWVQLSPIPGIYFRLRAAFKARQSALPGADKGKKRAASQGDDDAVDSTAQGESEQHADLLHTYIHTYIHTYIHTYIHTY # PASA_UPDATE: g3098.t1, single gene model update, valid-1, status:[pasa:asmbl_7172,status:12], valid-1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . gene 233 651 . - . ID=g3098;Name=g3098.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . mRNA 233 651 . - . ID=g3098.t1;Parent=g3098;Name=g3098.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . five_prime_UTR 606 651 . - . ID=g3098.t1.utr5p1;Parent=g3098.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . exon 233 651 . - . ID=g3098.t1.exon1;Parent=g3098.t1 NODE_4278_length_1890_cov_43.0738_potentialcontaminant . CDS 233 605 . - 0 ID=cds.g3098.t1;Parent=g3098.t1;3_prime_partial=true #PROT g3098.t1 g3098 MADVLDSVNQRIVDIESLIGKLEEKIDKLEDKVVPLDERIDALDQRIRDAELHILEAQNDPKRANDLAKLENSLANDVERRKQVEHKVSQLRDRQNKLSDQQSQLRDRQNKLRDQFLLLLQHAS # ORIGINAL: g4193.t1 original gene structure, not modified by PASA NODE_247_length_29354_cov_42.0464 AUGUSTUS gene 3430 4647 . - . ID=g4193;Name=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS mRNA 3430 4647 . - . ID=g4193.t1;Parent=g4193;Name=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 4274 4647 . - . ID=g4193.t1.exon1;Parent=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 4274 4647 . - 0 ID=cds.g4193.t1;Parent=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 3992 4170 . - . ID=g4193.t1.exon2;Parent=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 3992 4170 . - 1 ID=cds.g4193.t1;Parent=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 3430 3818 . - . ID=g4193.t1.exon3;Parent=g4193.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 3430 3818 . - 2 ID=cds.g4193.t1;Parent=g4193.t1 #PROT g4193.t1 g4193 MAMVGMMEETHAAHSNEAPRECGKLHEERQYLDLIRHILDNGETRGDRTGTGTRSVFGAQMRFNLRDGRFPLLTTKRVFWKGVAEELLWFVSGSTSGKALADRGVKIWDANGSRAYLDSIGLTNREEGDLGPVYGFQWRHFGAKYTDMHADYSGQGVDQLANVINTIKAKPTDRRMIISAWNPTDLSQMALPPCHMMCQFHVSSAGELSCQLYQRSGDMGLGVPFNIASYALLTCMIAHVTGLRPGDFVHTLGDAHVYLNHIDPLRVQLERDPRPFPTMRIARDVPDIDSFRFEDFVVEGYNPHPKIDMAMSV* # PASA_UPDATE: g4196.t1_g4197.t1, single gene model update, valid-1, status:[pasa:asmbl_4410,status:3], valid-1 NODE_247_length_29354_cov_42.0464 . gene 14219 16130 . - . ID=g4196_g4197;Name=MERGED%3A%20g4196.t1 NODE_247_length_29354_cov_42.0464 . mRNA 14219 16130 . - . ID=g4196.t1_g4197.t1;Parent=g4196_g4197;Name=MERGED%3A%20g4196.t1 NODE_247_length_29354_cov_42.0464 . five_prime_UTR 15944 16130 . - . ID=g4196.t1_g4197.t1.utr5p1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 15865 16130 . - . ID=g4196.t1_g4197.t1.exon1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 15865 15943 . - 0 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 15605 15688 . - . ID=g4196.t1_g4197.t1.exon2;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 15605 15688 . - 2 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 15363 15440 . - . ID=g4196.t1_g4197.t1.exon3;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 15363 15440 . - 2 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 14998 15194 . - . ID=g4196.t1_g4197.t1.exon4;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 14998 15194 . - 2 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 14740 14833 . - . ID=g4196.t1_g4197.t1.exon5;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 14740 14833 . - 0 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . exon 14219 14572 . - . ID=g4196.t1_g4197.t1.exon6;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . CDS 14460 14572 . - 2 ID=cds.g4196.t1_g4197.t1;Parent=g4196.t1_g4197.t1 NODE_247_length_29354_cov_42.0464 . three_prime_UTR 14219 14459 . - . ID=g4196.t1_g4197.t1.utr3p1;Parent=g4196.t1_g4197.t1 #PROT g4196.t1_g4197.t1 g4196_g4197 MANRAPAQRPAGATTGKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNPDTFGRAKTWVKELQRQASPNIVIALAGNKADLGAKRGVEYDEANAYAEDNGLLFMETSAKTAMNVNEIFLAIAKKLPKNEPRGAGANAGAKVDLVRADDDAARRKGGCC* # PASA_UPDATE: g4192.t1, single gene model update, valid-1, status:[pasa:asmbl_4405,status:12], valid-1 NODE_247_length_29354_cov_42.0464 . gene 2150 3862 . + . ID=g4192;Name=g4192.t1 NODE_247_length_29354_cov_42.0464 . mRNA 2150 3862 . + . ID=g4192.t1;Parent=g4192;Name=g4192.t1 NODE_247_length_29354_cov_42.0464 . five_prime_UTR 2150 2223 . + . ID=g4192.t1.utr5p1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . exon 2150 2419 . + . ID=g4192.t1.exon1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . CDS 2224 2419 . + 0 ID=cds.g4192.t1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . exon 2520 2650 . + . ID=g4192.t1.exon2;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . CDS 2520 2650 . + 2 ID=cds.g4192.t1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . exon 2749 2871 . + . ID=g4192.t1.exon3;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . CDS 2749 2871 . + 0 ID=cds.g4192.t1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . exon 2983 3069 . + . ID=g4192.t1.exon4;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . CDS 2983 3069 . + 0 ID=cds.g4192.t1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . exon 3238 3862 . + . ID=g4192.t1.exon5;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . CDS 3238 3327 . + 0 ID=cds.g4192.t1;Parent=g4192.t1 NODE_247_length_29354_cov_42.0464 . three_prime_UTR 3328 3862 . + . ID=g4192.t1.utr3p1;Parent=g4192.t1 #PROT g4192.t1 g4192 MERRTIFGSALALFKTGGSAHNVNSHGAVAEEVPKEPEIRDAFQMEIEEHHYKFTMNANPTAKMKASTEMAMIAWNGGEHAQNFIDKIHALDDFIDILKSASEPESLRMHMLKVISVVERNNRRIQDSLREYNFHKVLYDLLEPSESDNMRKWAAHTLFYFLVGNPANQALALKMTNIESRILMASALDWSRFDDNDAQELLLMLYPQ* # PASA_UPDATE: g4191.t1, single gene model update, valid-1, status:[pasa:asmbl_4408,status:12], valid-1 NODE_247_length_29354_cov_42.0464 . gene 83 1503 . - . ID=g4191;Name=g4191.t1 NODE_247_length_29354_cov_42.0464 . mRNA 83 1503 . - . ID=g4191.t1;Parent=g4191;Name=g4191.t1 NODE_247_length_29354_cov_42.0464 . exon 1405 1503 . - . ID=g4191.t1.exon1;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . CDS 1405 1503 . - 0 ID=cds.g4191.t1;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . exon 1154 1231 . - . ID=g4191.t1.exon2;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . CDS 1154 1231 . - 0 ID=cds.g4191.t1;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . exon 779 1002 . - . ID=g4191.t1.exon3;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . CDS 779 1002 . - 0 ID=cds.g4191.t1;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . exon 83 619 . - . ID=g4191.t1.exon4;Parent=g4191.t1 NODE_247_length_29354_cov_42.0464 . CDS 83 619 . - 1 ID=cds.g4191.t1;Parent=g4191.t1;3_prime_partial=true #PROT g4191.t1 g4191 MDQIKTLVNKIQKKPIEAREISSPSRFEHGLHVEHNQSTGVYKGLPDVWHEAVPSGASTDVTSTRYLHPSLVPPSLPRERDVKKGEIGQIGLPYNVAHNVHASVDLVRNGEIKGLPPEWETMLRSSGISNEEMKAHPDVVVEVLQFQTERLLSVERPPHDSPAALRARLGAAPASPLATSPSSRAKTTRDDAASGDAAGGAGVQAGAVTAGRDNVAPSKAAVEPADPWEAIVTPGDPTDVFSNMHKVGEGASGSVFTATEVRTGHTVAIKVISLLGNADAVGLRNEISMMASSKHSSIVEYIRSYLLRDSVW # ORIGINAL: g4198.t1 original gene structure, not modified by PASA NODE_247_length_29354_cov_42.0464 AUGUSTUS gene 17808 28075 . + . ID=g4198;Name=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS mRNA 17808 28075 . + . ID=g4198.t1;Parent=g4198;Name=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 17808 17865 . + . ID=g4198.t1.exon1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 17808 17865 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 18114 18257 . + . ID=g4198.t1.exon2;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 18114 18257 . + 2 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 18376 19018 . + . ID=g4198.t1.exon3;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 18376 19018 . + 2 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 19422 19516 . + . ID=g4198.t1.exon4;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 19422 19516 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 19657 20129 . + . ID=g4198.t1.exon5;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 19657 20129 . + 2 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 20283 20494 . + . ID=g4198.t1.exon6;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 20283 20494 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 20709 20780 . + . ID=g4198.t1.exon7;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 20709 20780 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 20979 21050 . + . ID=g4198.t1.exon8;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 20979 21050 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 21293 21358 . + . ID=g4198.t1.exon9;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 21293 21358 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 21539 21610 . + . ID=g4198.t1.exon10;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 21539 21610 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 21884 22024 . + . ID=g4198.t1.exon11;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 21884 22024 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 22254 22322 . + . ID=g4198.t1.exon12;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 22254 22322 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 22537 22608 . + . ID=g4198.t1.exon13;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 22537 22608 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 23120 23191 . + . ID=g4198.t1.exon14;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 23120 23191 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 23393 23464 . + . ID=g4198.t1.exon15;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 23393 23464 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 23709 23780 . + . ID=g4198.t1.exon16;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 23709 23780 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 23988 25153 . + . ID=g4198.t1.exon17;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 23988 25153 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 25240 25271 . + . ID=g4198.t1.exon18;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 25240 25271 . + 2 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 25443 25604 . + . ID=g4198.t1.exon19;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 25443 25604 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 25788 25907 . + . ID=g4198.t1.exon20;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 25788 25907 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 26103 26183 . + . ID=g4198.t1.exon21;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 26103 26183 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 26331 26434 . + . ID=g4198.t1.exon22;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 26331 26434 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 26612 26642 . + . ID=g4198.t1.exon23;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 26612 26642 . + 1 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 26909 26942 . + . ID=g4198.t1.exon24;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 26909 26942 . + 0 ID=cds.g4198.t1;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 27234 28075 . + . ID=g4198.t1.exon25;Parent=g4198.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 27234 28075 . + 2 ID=cds.g4198.t1;Parent=g4198.t1 #PROT g4198.t1 g4198 MAKVLVALIMVSLILPTTDAATASVISATTFMDNTLYSISQESFSSYRTVGSLAVKYGDTWMPADFTVPSFTNIPASGGVCARGLPSMNLFAYNVSSDYIETPPGQAFRVRVSTTTSANATTGFTLMTTATVVGGSTKSFRYYAFGCQGLSVNGAPVCIPTIMDLSAAILNETDRFVVSGSPIALLPSTRYDIAARIHSGRVAVMVSYSNRTISAFIECAPALEAALPWAKLRDQTGLPIAEDTNLNATTLFDFFGFFGGALNFTLCVSDFTIDKLDKDYVSYPLTGVYTLNIDTFETPPVLPPWSWSRWPASFGYSIPMPNATEGSSACASVPSGAMYMLDRRGKMYINGIFGFTADASADFGYVLRGFNSTSLEAGNQTLLFAGCRRGSARYMCVPTVYSLDGKYAWTSKERPLMPRTWYRLQMNFLPSQAIQWTLESMDGFGIKKGSSLLYSLTTSTGTGRATFTAAGVGFVMNDPFGLKPAETTGEVCIDSFQVTADLSNLDPGPNEDSIILCPSTCTCVGRTITACTGSGVGNVASLGWAGKGIKKILPGVFSNMSNVQTVDLSNNLLSDLPMDLFPTLPNLRYLNLDQNFISDISFLQNLTSIIRLDLDGNQITDLPKCIFGKMKSMSQLYLTNNRIARLDGACLESATRLSSLDLRYNLITTLPPDFLNKISADTVSIGYNRIGPQARPILRSRFMNYLDLSYNLLNENDISGLFDNAALNILILSGNYISKLTRTTFSGLAFLQRLDLMDNFITYVPAEAFRDVSSLISLALTRNQITAVEDYAFAVHYALNYLSFEKNRLTTLSPSVLPPDVFQSERSSVIMIDNPGSGNNMCDKANNCVPGTCFACFCMPGFRGASCDIPCAPGTYGLGCEKVCDCDGECNTVSGCVCADPRRYGPRCSLTYPPESIVPTVTLARATMANITWDPSQCIGCAFRLELAFRSERTTLVPFGTPVLLRPDTSFYVEESLFPNSYFYAILTAVLADGTNSLGLPVMFITKSESKPDPPSSLSATTTDNSITVSWNTDYADANGRLSGYRIELLDARGPTIVASGTVSRGIALYTFERLSAGSRFVCRVYAENIAGKSGAAALDVQTAASPVAVAAASTGGLSGASLAAAIAVPTVLISTLVFAAAVYWMYQRARLAKSRETHAAFLREHVSRRQELLAHEINRENLELHGQLGEGEFGLVYQGQVFVNGAFRICAVKSLKLTATLETRTEFISEAGLMLGLSNPNVVSLVGVVTETEPMLIVIEYAPYGNLKRFVDAIPQHKRRVTTSVRLLINFAFQIACGMEYLTTCKIVHRDLAARNVMVGQDAFGEYVLKIADFGMSRRVQSDYYRKRAGGKLPAKWCAPECLSRRVFNEKTDVWAFGVTVWEMFSFGETPYPGVSNSDIYKHILAGHRLTRPSACPRDVYDILRECWEREPTERPAFNQLADALDELADSALADPNDIEGGGDVPLAPISAGATDETRTPGDAHSSHADNASSTGANDYVMSPPLDGPGAGRGSGLAHQHQHQPPHTQPQPKRLGIPTISVNMAETNVSSDCLVVDDQSDAGSCEAEAPGVATAQSRTHRRRPSNISEPGAPRAGHRRMSSASGASFASGALGAISGGVGGGEGVADGRRTAKRRLISQGTQTAAEESPYDNVDRI* # ORIGINAL: g4199.t1 original gene structure, not modified by PASA NODE_247_length_29354_cov_42.0464 AUGUSTUS gene 28342 29095 . - . ID=g4199;Name=g4199.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS mRNA 28342 29095 . - . ID=g4199.t1;Parent=g4199;Name=g4199.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 28884 29095 . - . ID=g4199.t1.exon1;Parent=g4199.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 28884 29095 . - 0 ID=cds.g4199.t1;Parent=g4199.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS exon 28342 28441 . - . ID=g4199.t1.exon2;Parent=g4199.t1 NODE_247_length_29354_cov_42.0464 AUGUSTUS CDS 28342 28441 . - 1 ID=cds.g4199.t1;Parent=g4199.t1 #PROT g4199.t1 g4199 MVVGGLGEIDVDDWKRNTVYKNCGEGDAVVRWFWTAVAEYDTEKRARLLQFVTGTSRVPISGFKDLQGGCGFNRIDLPPYRSLLQLKEKLGIAICETMGFGID* # PASA_UPDATE: g4195.t1, single gene model update, valid-1, status:[pasa:asmbl_4409,status:3], valid-1 NODE_247_length_29354_cov_42.0464 . gene 8188 12422 . - . ID=g4195;Name=g4195.t1 NODE_247_length_29354_cov_42.0464 . mRNA 8188 12422 . - . ID=g4195.t1;Parent=g4195;Name=g4195.t1 NODE_247_length_29354_cov_42.0464 . five_prime_UTR 12245 12422 . - . ID=g4195.t1.utr5p1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . exon 11788 12422 . - . ID=g4195.t1.exon1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . CDS 11788 12244 . - 0 ID=cds.g4195.t1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . exon 11452 11656 . - . ID=g4195.t1.exon2;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . CDS 11452 11656 . - 2 ID=cds.g4195.t1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . exon 11241 11347 . - . ID=g4195.t1.exon3;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . CDS 11241 11347 . - 1 ID=cds.g4195.t1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . exon 8762 11124 . - . ID=g4195.t1.exon4;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . CDS 8762 11124 . - 2 ID=cds.g4195.t1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . exon 8188 8579 . - . ID=g4195.t1.exon5;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . CDS 8379 8579 . - 0 ID=cds.g4195.t1;Parent=g4195.t1 NODE_247_length_29354_cov_42.0464 . three_prime_UTR 8188 8378 . - . ID=g4195.t1.utr3p1;Parent=g4195.t1 #PROT g4195.t1 g4195 MGLSISRRVQWTARYGGPPTDSTGGRSGDKVDMTTRNETFLYELLKAVEVLVQNNPREAAVEFARPLQWQTVLRAGDFAQSRHASEYDIHDNDSDKSGVSSKEKRIDGKPLLHLEQMGDNLYVVKVSSFEFLSRVLTYAGTRRIKELQACIEANNDPLGSVSGVTADSTASALIASYERVQKLQAGETAEAEGVSAMFRLLLQLNLLDQRLLAAATQELSKEVHLGMDSVQAELELLQSFCGNDATNCLRNIDWESDYIFANGCRAPPWRQIYGELCYLDARPMEGDRVIITASAGGFFVNGGYTVDADGQEHMSYDRVGDLYPSLVALFRARSKHFAKTIDRQEMSYQPSRKQREVAEALTLPRSPLHQGENILDEDAEDADAAGERAGSRARADRAQKQALARAAKKKGAAAVSNSTHAPQRTVDPSPKWRNLGLGKPIDGTVGPADASSVPARTAPGSPPTRGGKKSPHGRHEGKSPNATRTPGVYGDGKDAYYSESDSDESEEEDTQDKKRQEANAELPPEYWQIQKLVKYLKGGNQTATIIALCSLRDFDLGNETNQLAIRDVGGLDVLINLLDTEDVKCKVGALQILKEISKNYQIKKAIAELDGIQPLVELLKDPNEELKCLAAETIAHCAKYARNRCAIRHYGGIRKLVRMLKGDKSGAPRNDSVARSGALALWSCSKSRKNKEAIRNAGAVPLLAKLLESQNEALLIPVVGIMQECSSDGQYRIMIRTSGMIRHLVANLNSTNAELQTHCASAIFKCAEDPETRDLVRKFGGLDPLVRLLHVTDNKELLAAATGAVWKCAANAENVGRFQELRAIDRLVSLLRGQPEDVLINVVGALGECAQTSENRKAIRSAGGIQHLVNLLTGTNRALLVNVTKAVGACALESENMVIIDKLDGVRLLWSLLKSPNPDVQASAAWAICPCIENAKDAGEMVRSFVGGLELIVSLLKSEDSEVLASVCAAIANIAKDEENLAVITDHGVVPMLAKLAQTLDDRLRRHLAEAIARCCHWGNNRVTFGSAGAVAPLVKYLRSPDEQVHRATARALYQLSLDPDNCITMHESGVVPLLLGMVGSSDEGLQEAAAGCIANIRRLALASEKAAQA* # PASA_UPDATE: g4194.t1, single gene model update, valid-1, status:[pasa:asmbl_4406,status:3], valid-1 NODE_247_length_29354_cov_42.0464 . gene 5150 8070 . + . ID=g4194;Name=g4194.t1 NODE_247_length_29354_cov_42.0464 . mRNA 5150 8070 . + . ID=g4194.t1;Parent=g4194;Name=g4194.t1 NODE_247_length_29354_cov_42.0464 . five_prime_UTR 5150 5337 . + . ID=g4194.t1.utr5p1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 5150 5385 . + . ID=g4194.t1.exon1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 5338 5385 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 5478 5552 . + . ID=g4194.t1.exon2;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 5478 5552 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 5723 5830 . + . ID=g4194.t1.exon3;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 5723 5830 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 5951 6044 . + . ID=g4194.t1.exon4;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 5951 6044 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 6188 6271 . + . ID=g4194.t1.exon5;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 6188 6271 . + 2 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 6406 6631 . + . ID=g4194.t1.exon6;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 6406 6631 . + 2 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 6855 6908 . + . ID=g4194.t1.exon7;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 6855 6908 . + 1 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 7005 7272 . + . ID=g4194.t1.exon8;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 7005 7272 . + 1 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 7394 7498 . + . ID=g4194.t1.exon9;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 7394 7498 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 7612 7707 . + . ID=g4194.t1.exon10;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 7612 7707 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . exon 7875 8070 . + . ID=g4194.t1.exon11;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . CDS 7875 7928 . + 0 ID=cds.g4194.t1;Parent=g4194.t1 NODE_247_length_29354_cov_42.0464 . three_prime_UTR 7929 8070 . + . ID=g4194.t1.utr3p1;Parent=g4194.t1 #PROT g4194.t1 g4194 MSNAGKFRDMRPDLRTAGKLSGMGQLSARDCIEPNWGFVDESSLSPSSRLRAPGQRRTVDPYAESMTHGVRSNVVSEAGDLLNPRPASEFFRQLEEHKEQKYKRAIPLGRSVCAVKAPLPPIVGQADFAFGIVNQKGEGAFEVIFPQKNAADPEAEETARRLYRRSHGDFDPGEQRDRNYSAFPREGRFGVPTPHSNAGLMTRESLRWSFDESALRRSRRYRELGKVHDPMADMRRVGPEHAFGVPNPTEPFHAGDLLHGRFPEAQAAQQQEPEGETPEERRRRTRSLSPRIVDGRIFGVPSRRTDISAPAHRSLADPQNYGDDLPAYDLMNPSLLTSRGLDLGELHELRSKEQMLDIMSSIGIGLSPDEFARAWQVASAGHSSGMASIRSFQEALETAPRSS* # ORIGINAL: g8155.t1 original gene structure, not modified by PASA NODE_2986_length_4590_cov_35.738 AUGUSTUS gene 199 2476 . + . ID=g8155;Name=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS mRNA 199 2476 . + . ID=g8155.t1;Parent=g8155;Name=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS exon 199 468 . + . ID=g8155.t1.exon1;Parent=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS CDS 199 468 . + 2 ID=cds.g8155.t1;Parent=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS exon 736 1923 . + . ID=g8155.t1.exon2;Parent=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS CDS 736 1923 . + 2 ID=cds.g8155.t1;Parent=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS exon 2181 2476 . + . ID=g8155.t1.exon3;Parent=g8155.t1 NODE_2986_length_4590_cov_35.738 AUGUSTUS CDS 2181 2476 . + 2 ID=cds.g8155.t1;Parent=g8155.t1 #PROT g8155.t1 g8155 GYGGIDISDCVAIDGFDAVLAMDWLGDNSGPHTPEEAAATYASLRSSFPNAEIVASSFEHYVDELESFLKESTHALPVFEGEVGDTWIYGIASDPRRNAEFRTISGIRAECLDGHLPCDASTPAFANFSRLLLKNAEHTWGGDTKKFLRAYDEPEAYMSWSNADFDAVRKTDEKFADFEASWVEQRLWGIEYAMEALDADGDSHANRALAKAMRLMVSWVVGGGEDRSSADGREWDADGEVTCGGHVIQFDASTGAIISLSSKGHVPVYAPALDGSGAGPNLLRLDYRTYSDDEFESYLSRYSYCGPDYPETCSWFAYDFAKLNSSHAVNGSASSLFHPRIVRIRTSLGCEKAGQDPPLVTVDLEFPKEATVRFGSPLTAVLQLYLGDPDGACIGAHISLYGKRPTRLPESLSVAFDAPVSSSAGMTATTVTPTRVWIDKLGVGRVPAFASAVNGSQHLHNTWGGVIVVADDADGAADYSTPASEAAAPRPLLEVYSPTASLVTVARRSLFPVPMDPAPHVTNAPPSDTTGFFYNLLNNLWGTNYVQWYPFLPEDADFHFDFSIGFPHLASTGTPAVCGRPRR* # ORIGINAL: g9309.t1 original gene structure, not modified by PASA NODE_2825_length_5051_cov_39.1047 AUGUSTUS gene 396 2513 . - . ID=g9309;Name=g9309.t1 NODE_2825_length_5051_cov_39.1047 AUGUSTUS mRNA 396 2513 . - . ID=g9309.t1;Parent=g9309;Name=g9309.t1 NODE_2825_length_5051_cov_39.1047 AUGUSTUS exon 1223 2513 . - . ID=g9309.t1.exon1;Parent=g9309.t1 NODE_2825_length_5051_cov_39.1047 AUGUSTUS CDS 1223 2513 . - 0 ID=cds.g9309.t1;Parent=g9309.t1 NODE_2825_length_5051_cov_39.1047 AUGUSTUS exon 396 1054 . - . ID=g9309.t1.exon2;Parent=g9309.t1 NODE_2825_length_5051_cov_39.1047 AUGUSTUS CDS 396 1054 . - 2 ID=cds.g9309.t1;Parent=g9309.t1 #PROT g9309.t1 g9309 MNIVRSISRAVVSVGQDVVHRLNHPLVAVGRLRQHAAASPTSPAIVFSASSSGGGTVITRANLLALVENVAKLDFPTLPPNAPIVLSARNDLWSIVAFLALGDLRGHPITLVNDSAPLREIAECIRAADPSLILLPRGSPHELELPMYLPNPLHSAPVRVLASGAELLAIRTDGANPLRTVQHFSEKDLPGSLPSSTSPPAAALRVRPMFEGALLCQLTSGSTSAAKLVARARSSVIAEVAAVTERIRLTSSDRVLVASPVAHSYALVGGLLSTVACGGTLYVASTPGEAPAIVCSQAQPTVLFGVPSTYASLSGPDYEGKVGSLASHVRLAMSAGSAVPRAVHEAFLRKTGLRIRQNYGCTELGTIAIDDTKVSAAVLTNAVPVTVSSTQPTVDAGPPSPDVVAAKPTASCVAVCAGPECYGQPLPHHEVRLVYESDSARLCPGEGEICVSGPHATSAHYISPCGTTMTTIATGTYGYHTRDGARLLPAPSEVPTSGGGVSTAVVGEDNDADDDASADEPDNDWVKLGPDHTLYCVRRLREYVHIRSSEDRNEFVMVDPEKLEIALKRIEGVSEAVVFALPPSAAGRKSVSAGGVAHERAVAVAGGGSSASVTTVQSLMDATSGANFTARAVIVPKRVGGMVDMEAVTR # PASA_UPDATE: g9310.t1, single gene model update, valid-1, status:[pasa:asmbl_5083,status:12], valid-1 NODE_2825_length_5051_cov_39.1047 . gene 3317 4683 . + . ID=g9310;Name=g9310.t1 NODE_2825_length_5051_cov_39.1047 . mRNA 3317 4683 . + . ID=g9310.t1;Parent=g9310;Name=g9310.t1 NODE_2825_length_5051_cov_39.1047 . five_prime_UTR 3317 3351 . + . ID=g9310.t1.utr5p1;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . exon 3317 3561 . + . ID=g9310.t1.exon1;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . CDS 3352 3561 . + 0 ID=cds.g9310.t1;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . exon 3865 3939 . + . ID=g9310.t1.exon2;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . CDS 3865 3939 . + 0 ID=cds.g9310.t1;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . exon 4109 4248 . + . ID=g9310.t1.exon3;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . CDS 4109 4248 . + 0 ID=cds.g9310.t1;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . exon 4572 4683 . + . ID=g9310.t1.exon4;Parent=g9310.t1 NODE_2825_length_5051_cov_39.1047 . CDS 4572 4683 . + 1 ID=cds.g9310.t1;Parent=g9310.t1 #PROT g9310.t1 g9310 MMLARAASRAASAVGAASIRAHTSAVGVRAMSAAAAKPKKEYKDPFAARPIFTEEHALFRETARKFFETEVVPYHAQWEKDGQVSRECWKKAGELGLLGTIFPEEYGGAGVDFLYSTIVMEEQGRLQVTGPGFALHTNIVMPYILHYGTEAQKKAWLPSMCDGTKIGAIAMTEPGAGR* # ORIGINAL: g13794.t1 original gene structure, not modified by PASA NODE_184_length_32978_cov_42.1783 AUGUSTUS gene 20916 24555 . - . ID=g13794;Name=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS mRNA 20916 24555 . - . ID=g13794.t1;Parent=g13794;Name=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 24423 24555 . - . ID=g13794.t1.exon1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 24423 24555 . - 0 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 24139 24210 . - . ID=g13794.t1.exon2;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 24139 24210 . - 2 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 23630 23822 . - . ID=g13794.t1.exon3;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 23630 23822 . - 2 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 23320 23390 . - . ID=g13794.t1.exon4;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 23320 23390 . - 1 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 23043 23120 . - . ID=g13794.t1.exon5;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 23043 23120 . - 2 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 22721 22839 . - . ID=g13794.t1.exon6;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 22721 22839 . - 2 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 22442 22573 . - . ID=g13794.t1.exon7;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 22442 22573 . - 0 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 21883 21952 . - . ID=g13794.t1.exon8;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 21883 21952 . - 0 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 21596 21656 . - . ID=g13794.t1.exon9;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 21596 21656 . - 2 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 21227 21287 . - . ID=g13794.t1.exon10;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 21227 21287 . - 1 ID=cds.g13794.t1;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 20916 21005 . - . ID=g13794.t1.exon11;Parent=g13794.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 20916 21005 . - 0 ID=cds.g13794.t1;Parent=g13794.t1 #PROT g13794.t1 g13794 MHKTTVTRELVTLPIAALHLARLSKAGFVTAQDVLEVQPLQLSKETGLSQEDALGIIQAVREHVEGRKAVARVKTAAELLQNDAGRQAPQSNPAAQFVSTFCGQMDSMLRGGIPLGVLTEFCGAPGIGKTQLGIQLALNVQLPVEFGGADGDALYIDTEGSFIIERVLEIADGTVAKLATAGGASVTRESLLSRIHYVRVHDHVQLIALAHTLDDFVKLHPKLRIVIVDSIAFHFRHDFSDMALRTRLLNAMAQSFGRVARETPLSVVLMNQMTTKVSGKDSGMLVPALGESWGHASTHRIILFWQVGIRHAKLYKSNSMKETTIKYDITADGVRDHVPSTRKRAREEGDSDDRDETNM* # ORIGINAL: g13791.t1 original gene structure, not modified by PASA NODE_184_length_32978_cov_42.1783 AUGUSTUS gene 11084 11758 . - . ID=g13791;Name=g13791.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS mRNA 11084 11758 . - . ID=g13791.t1;Parent=g13791;Name=g13791.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 11084 11758 . - . ID=g13791.t1.exon1;Parent=g13791.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 11084 11758 . - 0 ID=cds.g13791.t1;Parent=g13791.t1 #PROT g13791.t1 g13791 MSSFAPPSGSGDMTYAYAYNVFPKQTTRYWLEKGDPQAWIFKAKPYERELRNFKVEEITAYTAIGLRSKYHWYMEVITMDGSTFWYEMHDNGTALRGPIGPHHSRYQGSKVLRLDQSQLRPRLGLYELVHFTVPKYSTKTFNCHDFVYSVLYHAVRPEYLVSPSRSRYFGLSYWYFEGLTVTKLPGNQVHVDSPEPEKWGSWTKDIAWPIWLLEERRRRSIKEQ* # ORIGINAL: g13792.t1 original gene structure, not modified by PASA NODE_184_length_32978_cov_42.1783 AUGUSTUS gene 12874 17310 . - . ID=g13792;Name=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS mRNA 12874 17310 . - . ID=g13792.t1;Parent=g13792;Name=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 17094 17310 . - . ID=g13792.t1.exon1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 17094 17310 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 16844 16950 . - . ID=g13792.t1.exon2;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 16844 16950 . - 2 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 16525 16572 . - . ID=g13792.t1.exon3;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 16525 16572 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 16111 16185 . - . ID=g13792.t1.exon4;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 16111 16185 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 15612 15861 . - . ID=g13792.t1.exon5;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 15612 15861 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 15292 15374 . - . ID=g13792.t1.exon6;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 15292 15374 . - 2 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 14809 15000 . - . ID=g13792.t1.exon7;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 14809 15000 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 14523 14561 . - . ID=g13792.t1.exon8;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 14523 14561 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 14139 14339 . - . ID=g13792.t1.exon9;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 14139 14339 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 13753 13833 . - . ID=g13792.t1.exon10;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 13753 13833 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 13428 13546 . - . ID=g13792.t1.exon11;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 13428 13546 . - 0 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 13028 13212 . - . ID=g13792.t1.exon12;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 13028 13212 . - 1 ID=cds.g13792.t1;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 12874 12908 . - . ID=g13792.t1.exon13;Parent=g13792.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 12874 12908 . - 2 ID=cds.g13792.t1;Parent=g13792.t1 #PROT g13792.t1 g13792 MASNDSVDALSIRRREIYHDGRLEGRQMAQEAKAQDRIREVLSENQTAPEWMSQTKETYVRHALAGRNGRAGELRTDLQSTHFQFGHRDEDKHATIFRDSYKGEKIAHRAQPVVKKGSTESHVYDLTARVDDESDLRHSMYEKSYAEYHGNAEISSSRIRDRNSKYFRASHFDLGSGDRDIQSVTRSAYVATGCDSDSARVGEEIAKRLAQSHVLQPTEKELGPMGISLSKEDYQPVSAEVLADRKDHGYGAYVRATHFTLGTSTEAAVTDYSTQFTAHSARREKAFKPEHVPVAKSNAIVSDQLAFGNSTQRADYIRQNAEKEEYHQRMESMATSTRLGRESFPMGNPEQRADEHLRSLTKTNYTRPAVVSRPTEAIRHKAVPKLLAEEDGVEPGNYSSTVAQASYRPWEKGALGTKPEIRSLRTTTFSLGYDAPTLESEAHSKFKEYKDPEMTEPAPLSVYRSAGISDRASDNGQFYVSSQRTDYKPMELGPAPHRHAKPAQVKAHYFHEAAGDYLSVTKGDFILPESMEDRTKRTATLPA* # ORIGINAL: g13797.t1 original gene structure, not modified by PASA NODE_184_length_32978_cov_42.1783 AUGUSTUS gene 30170 31702 . - . ID=g13797;Name=g13797.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS mRNA 30170 31702 . - . ID=g13797.t1;Parent=g13797;Name=g13797.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 30170 31702 . - . ID=g13797.t1.exon1;Parent=g13797.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 30170 31702 . - 0 ID=cds.g13797.t1;Parent=g13797.t1 #PROT g13797.t1 g13797 MVSSLGFTSLPCEVVTDHIARHLSQSRDLTALAHVNATLLRLFRNVRTYTLRESYSIQYCQDDAFRRLVQSTLPSQRLVLICTATGCVDNAGVTCLADVHTVDLSSNDDIVDASPLKNVHALDLSYCAKVRDVASLGAGIIRILALSGTDVSDVSSLGRIHTLNLSNCNRVNDVSALGHVHSLNLSNCIGVVDVSALGKIHTLNLSYCSITDVSMLGNVHALNLSYCGNVRDVSALGTVHSLSLSDCAGVVDVSALGTVHSLDLTYLPLISDVSRLGGVHNLNISYCSGISDVSSLGRVHTLNISHCPNIKNIMALGGLHTLSFRSSTIADFSVLRRLYSIDLMGCDQLEDVSVLCDAHHLDVAFCPLVRDCSALGRVHSLNLSHTAVEDVSVLGSVHTLDISNTAVVDVSPLSNVHTLNISGTHVVDVSALVGVYSVNMVNCVRVTNVSALAKAHFLCLLNTGIADASALGNAHHLDLSGTNVTDLSSLDGVCVLTCPDGTRLSRRCHH* # PASA_UPDATE: g13790.t1, single gene model update, valid-1, status:[pasa:asmbl_2799,status:3], valid-1 NODE_184_length_32978_cov_42.1783 . gene 6998 10553 . + . ID=g13790;Name=g13790.t1 NODE_184_length_32978_cov_42.1783 . mRNA 6998 10553 . + . ID=g13790.t1;Parent=g13790;Name=g13790.t1 NODE_184_length_32978_cov_42.1783 . five_prime_UTR 6998 7084 . + . ID=g13790.t1.utr5p1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 6998 7084 . + . ID=g13790.t1.exon1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 7318 7424 . + . ID=g13790.t1.exon2;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 7318 7424 . + 0 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 7703 7763 . + . ID=g13790.t1.exon3;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 7703 7763 . + 1 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 8199 8304 . + . ID=g13790.t1.exon4;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 8199 8304 . + 0 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 8498 8582 . + . ID=g13790.t1.exon5;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 8498 8582 . + 2 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 8892 8935 . + . ID=g13790.t1.exon6;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 8892 8935 . + 1 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 9217 9348 . + . ID=g13790.t1.exon7;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 9217 9348 . + 2 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 9597 9719 . + . ID=g13790.t1.exon8;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 9597 9719 . + 2 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 9877 9994 . + . ID=g13790.t1.exon9;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 9877 9994 . + 2 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . exon 10266 10553 . + . ID=g13790.t1.exon10;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . CDS 10266 10362 . + 1 ID=cds.g13790.t1;Parent=g13790.t1 NODE_184_length_32978_cov_42.1783 . three_prime_UTR 10363 10553 . + . ID=g13790.t1.utr3p1;Parent=g13790.t1 #PROT g13790.t1 g13790 MATKEKVNMQFYEQLERSVDCDSWGQVVEAVDSYAKLSKKLKQEAKDSKVYSDDEKRVLAKIATCLDMRVDGLENAHADGIPIEEVKKLLSTLKQLMSEGTQFPVNVAEHKRKHNRMSSSDNVPVDEDDNIAGKAKGTLLPRATCYQSDGTLLTVRIHKIGLKDAGSLIEPFLVISLKDKKGEDLATEQTTPVSNRKESLYIHFDVDYELQKPIEKLPKDCAIFFQLKYYKAASRKISTKCYTFMEPDEIKQGPACLELYQKPLDYRRKNVKLFTVKSLYMHVDLIFHTD* # PASA_UPDATE: g13795.t1, single gene model update, valid-1, status:[pasa:asmbl_2802,status:3], valid-1 NODE_184_length_32978_cov_42.1783 . gene 25010 27263 . + . ID=g13795;Name=g13795.t1 NODE_184_length_32978_cov_42.1783 . mRNA 25010 27263 . + . ID=g13795.t1;Parent=g13795;Name=g13795.t1 NODE_184_length_32978_cov_42.1783 . five_prime_UTR 25010 25120 . + . ID=g13795.t1.utr5p1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 25010 25129 . + . ID=g13795.t1.exon1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 25121 25129 . + 0 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 25498 25532 . + . ID=g13795.t1.exon2;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 25498 25532 . + 0 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 25867 25925 . + . ID=g13795.t1.exon3;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 25867 25925 . + 1 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 26028 26101 . + . ID=g13795.t1.exon4;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 26028 26101 . + 2 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 26613 26736 . + . ID=g13795.t1.exon5;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 26613 26736 . + 0 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . exon 27071 27263 . + . ID=g13795.t1.exon6;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . CDS 27071 27165 . + 2 ID=cds.g13795.t1;Parent=g13795.t1 NODE_184_length_32978_cov_42.1783 . three_prime_UTR 27166 27263 . + . ID=g13795.t1.utr3p1;Parent=g13795.t1 #PROT g13795.t1 g13795 MAEELQSFFSRLLTRIPGLEAALVTDRDGVIVIKAVTDAVSEQALQSSFLATFALATEQAGKLGLGKNRSVTCMYENHQVIHFGHLPLIISLIASADANTGILLNLEKELKAAVDPVVAAFKSRAPELDIN* # PASA_UPDATE: g13788.t1, single gene model update, valid-1, status:[pasa:asmbl_2796,status:12],[pasa:asmbl_2797,status:12], valid-1 NODE_184_length_32978_cov_42.1783 . gene 80 3285 . - . ID=g13788;Name=g13788.t1 NODE_184_length_32978_cov_42.1783 . mRNA 80 3285 . - . ID=g13788.t1;Parent=g13788;Name=g13788.t1 NODE_184_length_32978_cov_42.1783 . five_prime_UTR 3269 3285 . - . ID=g13788.t1.utr5p1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 3139 3285 . - . ID=g13788.t1.exon1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 3139 3268 . - 0 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 2611 2751 . - . ID=g13788.t1.exon2;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 2611 2751 . - 2 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 2289 2419 . - . ID=g13788.t1.exon3;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 2289 2419 . - 2 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 1816 2044 . - . ID=g13788.t1.exon4;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 1816 2044 . - 0 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 877 1362 . - . ID=g13788.t1.exon5;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 877 1362 . - 2 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 491 643 . - . ID=g13788.t1.exon6;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 491 643 . - 2 ID=cds.g13788.t1;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . exon 80 238 . - . ID=g13788.t1.exon7;Parent=g13788.t1 NODE_184_length_32978_cov_42.1783 . CDS 80 238 . - 2 ID=cds.g13788.t1;Parent=g13788.t1;3_prime_partial=true #PROT g13788.t1 g13788 MRAPSTPASVAIIALFMCVLLVCGANATPKKIAVLIQTPLYNSDNDPNMFYLLAKQGCDKAVIEFGLNSTHQCEILYEPDAEIGATKVGNDSTYVHAFGVGFQWADPLSRVADQYPNKTYSIVDTSAPSKINLQGLIFAEDQAGFIAGVVAGLFTRSLTVGVLAGTPFGPLLKFRNGFLQGVLYVCPFCNVLGAYVNTFSDVDLAVNATKIQMDQGADVFYGVGGAMGPAADKYAAGRGSFVIGIDSDLRLTDFKNASDPRTQMLITSTEKRTDVAAYLSLKDKFEGKFAGGTKLIDMTAGGLLLSPCSSDKTCALYNEQTVFQETPDGGGCAYTRVLTRDARIKLVTSRIKGGLLPTGVNSGGYINALAYSKGNEAWALYSPYGLRPPALEGHTAVMTKKNFLVVFGGQNDKVSNETYELDYDNFEWRRVLVSGSAPAARADHSAVLVNSTGKMIVYGGVGEDGTSLGDTWSYDT # ORIGINAL: g13796.t1 original gene structure, not modified by PASA NODE_184_length_32978_cov_42.1783 AUGUSTUS gene 27975 29847 . + . ID=g13796;Name=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS mRNA 27975 29847 . + . ID=g13796.t1;Parent=g13796;Name=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 27975 28050 . + . ID=g13796.t1.exon1;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 27975 28050 . + 0 ID=cds.g13796.t1;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 28214 28524 . + . ID=g13796.t1.exon2;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 28214 28524 . + 2 ID=cds.g13796.t1;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 28970 29213 . + . ID=g13796.t1.exon3;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 28970 29213 . + 0 ID=cds.g13796.t1;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS exon 29510 29847 . + . ID=g13796.t1.exon4;Parent=g13796.t1 NODE_184_length_32978_cov_42.1783 AUGUSTUS CDS 29510 29847 . + 2 ID=cds.g13796.t1;Parent=g13796.t1 #PROT g13796.t1 g13796 MASSQRVAFALCAVTFIAVLVSNHADAALPKLYSNNAGRFSFMCTIGNSDIQDGGTSIVLGDDDGSVAVEGLCRFLTLESEHGSLLTCEGHYSSSAGTQNTAALSYNLGKTVAGVDYVGIRVEPHGAVTFFFASDAVGDAQVGTPFTRKAAPTGDKGNAFNHAIEDYGTISDDSGSITCRARLEYFYTKGGKCSAVGSLSSSYHVQQLKPSGTCLDKVVKNVANGSETTFVCFDDGLKLIDSNAGNQILLNGFVKADSSALQCVTGQSYRVALGVSVGQARLECFCRTSLLHATKVLHDAELYLCVDDPNIPQIFSHEPVSE* # PASA_UPDATE: g13789.t1, single gene model update, valid-1, status:[pasa:asmbl_2798,status:3], valid-1 NODE_184_length_32978_cov_42.1783 . gene 3757 6722 . - . ID=g13789;Name=g13789.t1 NODE_184_length_32978_cov_42.1783 . mRNA 3757 6722 . - . ID=g13789.t1;Parent=g13789;Name=g13789.t1 NODE_184_length_32978_cov_42.1783 . five_prime_UTR 6537 6722 . - . ID=g13789.t1.utr5p1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 6530 6722 . - . ID=g13789.t1.exon1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 6530 6536 . - 0 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 6159 6260 . - . ID=g13789.t1.exon2;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 6159 6260 . - 2 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 5833 5969 . - . ID=g13789.t1.exon3;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 5833 5969 . - 2 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 5195 5311 . - . ID=g13789.t1.exon4;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 5195 5311 . - 0 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 4874 4986 . - . ID=g13789.t1.exon5;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 4874 4986 . - 0 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 4485 4629 . - . ID=g13789.t1.exon6;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 4485 4629 . - 1 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 4047 4226 . - . ID=g13789.t1.exon7;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 4047 4226 . - 0 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . exon 3757 3904 . - . ID=g13789.t1.exon8;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . CDS 3788 3904 . - 0 ID=cds.g13789.t1;Parent=g13789.t1 NODE_184_length_32978_cov_42.1783 . three_prime_UTR 3757 3787 . - . ID=g13789.t1.utr3p1;Parent=g13789.t1 #PROT g13789.t1 g13789 MADMGAHFKELLAAEPDLPTAVAAVRTLIHSIKESKSTTMMELREELKGVIQLLTSSVGFSISLSSGCDLFMRFVTRTALDSDFEQCKRLLIERGNVFVEKAASSRVKIATIGTPFIRDGATILTHARSRVINRLLVEAVKANKRINVIVTESRPDNSGYACAKFLEEAGIPVTVILDAAVGYVMEKADLVLVGAEGVVESGGIINKIGTYQLAVVAKAANKPVYAVAESFKFVRLFPLNQYDLPTPSKTDDSFVMEQYAPLSDGIKFMNPTVDYTPPAYISLLFTDLGVLTPSAVSDELIKLYY* # PASA_UPDATE: g13793.t1, single gene model update, valid-1, status:[pasa:asmbl_2800,status:12],[pasa:asmbl_2801,status:12], valid-1 NODE_184_length_32978_cov_42.1783 . gene 18007 20750 . + . ID=g13793;Name=g13793.t1 NODE_184_length_32978_cov_42.1783 . mRNA 18007 20750 . + . ID=g13793.t1;Parent=g13793;Name=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 18007 18376 . + . ID=g13793.t1.exon1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 18007 18376 . + 0 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 18639 18772 . + . ID=g13793.t1.exon2;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 18639 18772 . + 2 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 18959 19112 . + . ID=g13793.t1.exon3;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 18959 19112 . + 0 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 19194 19597 . + . ID=g13793.t1.exon4;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 19194 19597 . + 2 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 19836 19933 . + . ID=g13793.t1.exon5;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 19836 19933 . + 0 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 20149 20290 . + . ID=g13793.t1.exon6;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 20149 20290 . + 1 ID=cds.g13793.t1;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . exon 20496 20750 . + . ID=g13793.t1.exon7;Parent=g13793.t1 NODE_184_length_32978_cov_42.1783 . CDS 20496 20750 . + 0 ID=cds.g13793.t1;Parent=g13793.t1 #PROT g13793.t1 g13793 MSDHPVLAPAPAAVDASSESTTPITAAAQGAWGKAAPAIASTPAASPAAATAAPPSNNSGPNVTLVIDSGAFIKGARLERMGCEFYTLPDVLGEIKDVRTRQAIEALPYQLKFREPTPESIQQVIKFAKLTGDFASLSVVDLRVLALTYTLEKEFNGSDHIRTQPVPQVTLKTGTGAVKGSTAGFFFPRSTSTTVPFAEATTVNPFSVTAFLHSPSREEYNRRMNIATTSSVASVEDAAAHPDATEGAVGHAAQTESQAHASGSEELTDGGDDNSDEGSGADGEGVDEGAEGATDDASAANVVDEDDNEGWITPDNIASANHHLNDDQVAADSWSAAVDSRRKVACVSTDFSLQNVLIQMGMHVLSVDGMLVKRARTFVFKCHACNKITKDMTRLFCGTCGNNTLRRIAISVDENGVTHYHQNRNKPINIRGTKYSIPAPKGGRNNNDLILREDQLKHANRTRGKKKGALDVFDPDYVASSSPFASAVDPRKARGSEVQVGFGKRNPNEAKRKSGRRK* # PASA_UPDATE: g13534.t1, single gene model update, valid-1, status:[pasa:asmbl_1808,status:3], valid-1 NODE_1505_length_10856_cov_38.6722 . gene 718 2325 . + . ID=g13534;Name=g13534.t1 NODE_1505_length_10856_cov_38.6722 . mRNA 718 2325 . + . ID=g13534.t1;Parent=g13534;Name=g13534.t1 NODE_1505_length_10856_cov_38.6722 . five_prime_UTR 718 959 . + . ID=g13534.t1.utr5p1;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . exon 718 1186 . + . ID=g13534.t1.exon1;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . CDS 960 1186 . + 0 ID=cds.g13534.t1;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . exon 1592 1652 . + . ID=g13534.t1.exon2;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . CDS 1592 1652 . + 1 ID=cds.g13534.t1;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . exon 1943 2325 . + . ID=g13534.t1.exon3;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . CDS 1943 2029 . + 0 ID=cds.g13534.t1;Parent=g13534.t1 NODE_1505_length_10856_cov_38.6722 . three_prime_UTR 2030 2325 . + . ID=g13534.t1.utr3p1;Parent=g13534.t1 #PROT g13534.t1 g13534 MSHVWAKYADMLLAASKPSFVNGAWRKPRLGAMALAALRKDALVHGETFPIPDKVRKELRVQPPKGHKFLAAKEEREARIQEGLAKMPKLIADYRKEKAIERAESKKNKGVYRVKDAVFSIKNN* # ORIGINAL: g13533.t1 original gene structure, not modified by PASA NODE_1505_length_10856_cov_38.6722 AUGUSTUS gene 125 321 . - . ID=g13533;Name=g13533.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS mRNA 125 321 . - . ID=g13533.t1;Parent=g13533;Name=g13533.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 125 321 . - . ID=g13533.t1.exon1;Parent=g13533.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 125 321 . - 0 ID=cds.g13533.t1;Parent=g13533.t1 #PROT g13533.t1 g13533 MAHALPSLAAGESVLVQCASEWKKQKGVLFVTERRILWKNTATGVETVLQLSDVGGKCAYSFSYV # ORIGINAL: g13535.t1 original gene structure, not modified by PASA NODE_1505_length_10856_cov_38.6722 AUGUSTUS gene 2794 6652 . - . ID=g13535;Name=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS mRNA 2794 6652 . - . ID=g13535.t1;Parent=g13535;Name=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 6537 6652 . - . ID=g13535.t1.exon1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 6537 6652 . - 0 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 6190 6268 . - . ID=g13535.t1.exon2;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 6190 6268 . - 1 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 5732 5819 . - . ID=g13535.t1.exon3;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 5732 5819 . - 0 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 5428 5501 . - . ID=g13535.t1.exon4;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 5428 5501 . - 2 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 4865 4973 . - . ID=g13535.t1.exon5;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 4865 4973 . - 0 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 4518 4625 . - . ID=g13535.t1.exon6;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 4518 4625 . - 2 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 4002 4107 . - . ID=g13535.t1.exon7;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 4002 4107 . - 2 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 3612 3732 . - . ID=g13535.t1.exon8;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 3612 3732 . - 1 ID=cds.g13535.t1;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 2794 3324 . - . ID=g13535.t1.exon9;Parent=g13535.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 2794 3324 . - 0 ID=cds.g13535.t1;Parent=g13535.t1 #PROT g13535.t1 g13535 MASLLSHDASGHEHNNHSTPAKPTMSKMATLLAHLPEESPRRNSASATKSRVASDDFVSRIQSLQTEQTTTAFSGLSDDVERASNASSVKGSQKSVQNNLYEEHAELKWHMRKEAAEKEALSAQIEHSNRTINELRSDIASLRQQLGDLQIEARKASTRGDGQKRAFDVEHAARIKAELDCQKMERDITRLKSELHDMARDTAPLEGVVNDLRGRAAAFADREKGMRLHYEQALEGERVERTRIEEALKAAESAAKMHMADALASQKVVAELTARLGAAESARHRRSVGFHDAEGSQAKMSTELHHVIDGLNMEVQSLRADVREKEVALIRKNERCVYLERELQSAIDAAVRADISAREADASLPEMRRQIDRERAQKEVLMMEVAAEKKRAERAESTLLIEHRLRMHQQQQMESAGLRLHAGHVGSSVYGGAVSDADERDEY* # ORIGINAL: g13537.t1 original gene structure, not modified by PASA NODE_1505_length_10856_cov_38.6722 AUGUSTUS gene 10190 10636 . - . ID=g13537;Name=g13537.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS mRNA 10190 10636 . - . ID=g13537.t1;Parent=g13537;Name=g13537.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 10190 10636 . - . ID=g13537.t1.exon1;Parent=g13537.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 10190 10636 . - 0 ID=cds.g13537.t1;Parent=g13537.t1 #PROT g13537.t1 g13537 MQDRPTFTELAESFSSFFGDGKLSAKLSYRNSHPANNADADTDAPRRRRSSVPLEGVAETTEDASGSSEYLETVAAMTLSGMSDGDKGNGDDNVGEYLDLERMDQHVRTQTVSQHVYVRLEADNSDVATCNEGAVPVEINGRVRHVDV* # ORIGINAL: g13536.t1 original gene structure, not modified by PASA NODE_1505_length_10856_cov_38.6722 AUGUSTUS gene 7816 9254 . + . ID=g13536;Name=g13536.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS mRNA 7816 9254 . + . ID=g13536.t1;Parent=g13536;Name=g13536.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 7816 8119 . + . ID=g13536.t1.exon1;Parent=g13536.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 7816 8119 . + 0 ID=cds.g13536.t1;Parent=g13536.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS exon 8488 9254 . + . ID=g13536.t1.exon2;Parent=g13536.t1 NODE_1505_length_10856_cov_38.6722 AUGUSTUS CDS 8488 9254 . + 2 ID=cds.g13536.t1;Parent=g13536.t1 #PROT g13536.t1 g13536 MEGDGHQAERPRLNLKPRSGDAAGSPQRAAEGKNNPFGGARPREENVSLDQQERLAKKFEEIDLERQNAIESRVQHPDGQKPRSSGDSPNAPQQRQGGFRTGPPPQQPGFGGYGARGQQGGYQSSPNNGGYNNRPQYGDRGSQGGYGQGGYQSNQGGYQSNQGGYDQQQRPRSSRPGDGYTCKICNVPGHWIQDCPQYVATRGAPGVQGSGAPRQQMGGQFGGNGGYDGGFDRGQQGPRPVPQGYVCKICSVPGHWIQDCPQKQQGAPPQHGGYGQQRGGFDSPSGHGGQSQHVQASSGYSPVSASYSATLPPDGYICKICKIPGHFIHQCPDYRKGHEAHDRKRGLDGDGFGGDF* # PASA_UPDATE: g6040.t1, single gene model update, valid-1, status:[pasa:asmbl_2029,status:12], valid-1 NODE_1580_length_10370_cov_40.6212 . gene 208 2628 . + . ID=g6040;Name=g6040.t1 NODE_1580_length_10370_cov_40.6212 . mRNA 208 2628 . + . ID=g6040.t1;Parent=g6040;Name=g6040.t1 NODE_1580_length_10370_cov_40.6212 . five_prime_UTR 208 208 . + . ID=g6040.t1.utr5p1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . exon 208 297 . + . ID=g6040.t1.exon1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 209 297 . + 0 ID=cds.g6040.t1;Parent=g6040.t1;5_prime_partial=true NODE_1580_length_10370_cov_40.6212 . exon 492 614 . + . ID=g6040.t1.exon2;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 492 614 . + 1 ID=cds.g6040.t1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . exon 830 1004 . + . ID=g6040.t1.exon3;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 830 1004 . + 1 ID=cds.g6040.t1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . exon 1368 1504 . + . ID=g6040.t1.exon4;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 1368 1504 . + 0 ID=cds.g6040.t1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . exon 1658 1727 . + . ID=g6040.t1.exon5;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 1658 1727 . + 1 ID=cds.g6040.t1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . exon 2180 2628 . + . ID=g6040.t1.exon6;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . CDS 2180 2584 . + 0 ID=cds.g6040.t1;Parent=g6040.t1 NODE_1580_length_10370_cov_40.6212 . three_prime_UTR 2585 2628 . + . ID=g6040.t1.utr3p1;Parent=g6040.t1 #PROT g6040.t1 g6040 YMFHGGTNFGYYNGANTGSSAYEFQPTVTSYDYDAPLTESGNYAPKYNPICTVVAKYADGPVPPRPTEAQTAAYGSVALSDHVSLFDALGSALHYDDAPVTMEMAGIGQGFALYSTTVKAGTVGTLAIKDVRDRAIVFLDGVVIGTVYRNDGQIASLNVTIKDGASLDVLVENMGHVNYGSYIYDPKGLIGGVTLNNEPLNGWSVRPIRDNDVTHLPFVNGPPPSYPAFTRGHVVLPGGKPAADTYLAFDGFTKGVAFVNGVNIGRYWNVGPQFTLFVPADLLVPGVANEIVILELHGYVGDGPAVITLQDSPRLNRESSVKPLLISPQRRI* # PASA_UPDATE: g6041.t1, single gene model update, valid-1, status:[pasa:asmbl_2030,status:12], valid-1 NODE_1580_length_10370_cov_40.6212 . gene 3614 8200 . + . ID=g6041;Name=g6041.t1 NODE_1580_length_10370_cov_40.6212 . mRNA 3614 8200 . + . ID=g6041.t1;Parent=g6041;Name=g6041.t1 NODE_1580_length_10370_cov_40.6212 . five_prime_UTR 3614 3850 . + . ID=g6041.t1.utr5p1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . five_prime_UTR 4081 4190 . + . ID=g6041.t1.utr5p2;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 3614 3850 . + . ID=g6041.t1.exon1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 4081 4946 . + . ID=g6041.t1.exon2;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 4191 4946 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 5347 5730 . + . ID=g6041.t1.exon3;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 5347 5730 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 6290 6481 . + . ID=g6041.t1.exon4;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 6290 6481 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 6678 6776 . + . ID=g6041.t1.exon5;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 6678 6776 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 7165 7233 . + . ID=g6041.t1.exon6;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 7165 7233 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 7437 7493 . + . ID=g6041.t1.exon7;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 7437 7493 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 7826 7918 . + . ID=g6041.t1.exon8;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 7826 7918 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . exon 8147 8200 . + . ID=g6041.t1.exon9;Parent=g6041.t1 NODE_1580_length_10370_cov_40.6212 . CDS 8147 8200 . + 0 ID=cds.g6041.t1;Parent=g6041.t1 #PROT g6041.t1 g6041 MSCPFFSASSGARPSGAPPPNHPAFPPGHPEQSGGSGDNSPYTNPHHLGDALITFDEFGHVVALNNTAERLLGVASSLAIGAPIGNFIPFFDYRGAFAPNRKRAADDGEENSEIAARLSYQHISGGLLAPGTAVEMDAKTADGRIFPAEVCLLRRSGTSRSPSSGSTLTASANAMQVDDMHGIGGDSYAHPLGERHVRTASVIVRDARSRVRSETLVESQVLQSVLDLAADAIITITSEGIVQSFNNAAEKMFGYSASEVINNNVKMLMPSPYAENHDMYLRNYVETGVRRVIGIGREVEGRRKDGSVFPMELSLSEVKYGECHLFTGIIRDITERKTMQRTLIYKRQKLQAVLDLAIDAILTIGIDGIVLSLNSAAEKMVEANKEIASRAEDSERLRRVSEFEKSAAQEELQRTQNQRLADKLMDEEKDRRITEETMSQMREEALRKVNQSVADRAQDEEQQARVNQEHIAEVQQEFVRRRSITDAVKAEDDEQRRRIAEANKLTVVEEIVRVKNAKLADNEEDVEQERRVKEGDETPDKRERRKSISEALDAHKRRCQAEGKPLA* # ORIGINAL: g6042.t1 original gene structure, not modified by PASA NODE_1580_length_10370_cov_40.6212 AUGUSTUS gene 8829 10315 . + . ID=g6042;Name=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS mRNA 8829 10315 . + . ID=g6042.t1;Parent=g6042;Name=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS exon 8829 9402 . + . ID=g6042.t1.exon1;Parent=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS CDS 8829 9402 . + 0 ID=cds.g6042.t1;Parent=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS exon 9587 9727 . + . ID=g6042.t1.exon2;Parent=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS CDS 9587 9727 . + 2 ID=cds.g6042.t1;Parent=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS exon 9978 10315 . + . ID=g6042.t1.exon3;Parent=g6042.t1 NODE_1580_length_10370_cov_40.6212 AUGUSTUS CDS 9978 10315 . + 2 ID=cds.g6042.t1;Parent=g6042.t1 #PROT g6042.t1 g6042 MTRVAPLKGADLPPIRRVPELNPEHDGRDGAKKTLPPLSADVAAKLGSPSSQLASPRGAAVKSDGDNDAMSPARRLHSTEDVAKTYTKTNVGADAESDRVRGSKSCSSAEGVASAEGGDAVAGDAGDAGDALRDNAPSRMSMANGGGSGPLKGSTPSIASQQELQKSKSVDYKHNMDVGKGQALITDGAPKDLFLSYCRVDQEIVRQVYDKLRDHFRNPWVDWQDIPLVSDWLDTIHKGIEGSDVFIFMLSPDSVKSEVCRKEIDHAVSLHKKLVPVVIRDVDPKAVHEALAVINWVFMRPEKETIAGAFPRLLHAIDIDLEHVRVGALAGGGVWVGCEHGVASLFRCLG* # PASA_UPDATE: g6388.t1, single gene model update, valid-1, status:[pasa:asmbl_6064,status:12], valid-1 NODE_3434_length_3471_cov_40.9935 . gene 217 3290 . + . ID=g6388;Name=g6388.t1 NODE_3434_length_3471_cov_40.9935 . mRNA 217 3290 . + . ID=g6388.t1;Parent=g6388;Name=g6388.t1 NODE_3434_length_3471_cov_40.9935 . five_prime_UTR 217 285 . + . ID=g6388.t1.utr5p1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 217 396 . + . ID=g6388.t1.exon1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 286 396 . + 0 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 744 887 . + . ID=g6388.t1.exon2;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 744 887 . + 0 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 1127 1253 . + . ID=g6388.t1.exon3;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 1127 1253 . + 0 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 1560 1619 . + . ID=g6388.t1.exon4;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 1560 1619 . + 2 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 1772 1873 . + . ID=g6388.t1.exon5;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 1772 1873 . + 2 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 2071 2333 . + . ID=g6388.t1.exon6;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 2071 2333 . + 2 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 2754 2940 . + . ID=g6388.t1.exon7;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 2754 2940 . + 0 ID=cds.g6388.t1;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . exon 3146 3290 . + . ID=g6388.t1.exon8;Parent=g6388.t1 NODE_3434_length_3471_cov_40.9935 . CDS 3146 3290 . + 2 ID=cds.g6388.t1;Parent=g6388.t1;3_prime_partial=true #PROT g6388.t1 g6388 MAGFGKKVWAPHPTDGYQIGEIADVGADSLSVQAGGQTLTVPYNRVFPADDASNAGVNDNCQLMFLNEASLLHNLRKRYEKDEIYTYTANILIALNPYRELKVYDAATIEKYRGKSLGVLPPHVFAIADAAYRDMKVTKQSQSIIISGESGAGKTESTKYVIRYLTVTGKAGGSIEKRIVQANPLLEAFGNAKTSRNNNSSRFGKFVEIHFDGTSTVAGAFISHYLLEKSRIIKQSPEERNYHVFYRLCNGATEDVKKGLGLGPATSFRYLKGGITDAVKGLDDTAEYKQMMQSMSDLGLSQEEQMNILRVAAAVLHLGNIDFQENSKDQKGGSEVASASEKTAVGAANMIGLAPNDLKERLCSRIMSTARGGNLGTIY # PASA_UPDATE: g13112.t1, single gene model update, valid-1, status:[pasa:asmbl_5573,status:3], valid-1 NODE_3108_length_4281_cov_41.8997 . gene 2748 4058 . - . ID=g13112;Name=g13112.t1 NODE_3108_length_4281_cov_41.8997 . mRNA 2748 4058 . - . ID=g13112.t1;Parent=g13112;Name=g13112.t1 NODE_3108_length_4281_cov_41.8997 . five_prime_UTR 3811 4058 . - . ID=g13112.t1.utr5p1;Parent=g13112.t1 NODE_3108_length_4281_cov_41.8997 . exon 3375 4058 . - . ID=g13112.t1.exon1;Parent=g13112.t1 NODE_3108_length_4281_cov_41.8997 . CDS 3375 3810 . - 0 ID=cds.g13112.t1;Parent=g13112.t1 NODE_3108_length_4281_cov_41.8997 . exon 2748 3233 . - . ID=g13112.t1.exon2;Parent=g13112.t1 NODE_3108_length_4281_cov_41.8997 . CDS 3154 3233 . - 2 ID=cds.g13112.t1;Parent=g13112.t1 NODE_3108_length_4281_cov_41.8997 . three_prime_UTR 2748 3153 . - . ID=g13112.t1.utr3p1;Parent=g13112.t1 #PROT g13112.t1 g13112 MRDEASEDGDSTPHTSPAVASLELIPPQRMASSIPDNILPKDIRSVVRSASPAVLRSVSIQRVRRNLFGCVNENEMLSDLMRDSDREVMEKSDAYNFDFVAGRPRAVQGTRYDWSVCAGTTDARRISVGITPCFSESTTTSSEQQDVVIMGFATPRPRTLKRLQRSPRHIQ* # ORIGINAL: g13110.t1 original gene structure, not modified by PASA NODE_3108_length_4281_cov_41.8997 AUGUSTUS gene 174 539 . + . ID=g13110;Name=g13110.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS mRNA 174 539 . + . ID=g13110.t1;Parent=g13110;Name=g13110.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS exon 174 539 . + . ID=g13110.t1.exon1;Parent=g13110.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS CDS 174 539 . + 0 ID=cds.g13110.t1;Parent=g13110.t1 #PROT g13110.t1 g13110 MVEVVIVADTVFDVSVADVFDAALADVVFATGISAGAQGGGHTDPTNSGERKSEQKSNTTGKGASGRARMKIPPLQQDEVGGNKECLAIGLASTSSDSRITACSPLRAAGVAGHPSRECTR* # ORIGINAL: g13111.t1 original gene structure, not modified by PASA NODE_3108_length_4281_cov_41.8997 AUGUSTUS gene 2290 2523 . + . ID=g13111;Name=g13111.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS mRNA 2290 2523 . + . ID=g13111.t1;Parent=g13111;Name=g13111.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS exon 2290 2523 . + . ID=g13111.t1.exon1;Parent=g13111.t1 NODE_3108_length_4281_cov_41.8997 AUGUSTUS CDS 2290 2523 . + 0 ID=cds.g13111.t1;Parent=g13111.t1 #PROT g13111.t1 g13111 MDEQKVTQTKSELDELREASARRRAGNLTDTSGQTFSYNKGGMDNATSKVAVDKAGKASTGATDLVKDSEVEKSYVI* # ORIGINAL: g3778.t1 original gene structure, not modified by PASA NODE_3383_length_3582_cov_34.7656 AUGUSTUS gene 2960 3514 . - . ID=g3778;Name=g3778.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS mRNA 2960 3514 . - . ID=g3778.t1;Parent=g3778;Name=g3778.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS exon 2960 3514 . - . ID=g3778.t1.exon1;Parent=g3778.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS CDS 2960 3514 . - 0 ID=cds.g3778.t1;Parent=g3778.t1 #PROT g3778.t1 g3778 MAIATHLQKDIYYVHLNTVKTNDELQMIFDHVNKNCPNGGVIVCEDIDAMTNVVHQRTNEQATDAAQFTLEYFLNLLQGSLTQDGSIFVATTNHLEHLDSAFYRDGRFDIRIELKKCDHYQIQTIYQQMFERSIPENLLKRIPEDTFTPATFIYEIRSYMFRQHTDEEILSKFIGTDRRATTVL* # ORIGINAL: g3777.t1 original gene structure, not modified by PASA NODE_3383_length_3582_cov_34.7656 AUGUSTUS gene 2 2729 . + . ID=g3777;Name=g3777.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS mRNA 2 2729 . + . ID=g3777.t1;Parent=g3777;Name=g3777.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS exon 2 1769 . + . ID=g3777.t1.exon1;Parent=g3777.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS CDS 2 1769 . + 1 ID=cds.g3777.t1;Parent=g3777.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS exon 2613 2729 . + . ID=g3777.t1.exon2;Parent=g3777.t1 NODE_3383_length_3582_cov_34.7656 AUGUSTUS CDS 2613 2729 . + 0 ID=cds.g3777.t1;Parent=g3777.t1 #PROT g3777.t1 g3777 SILTSSTTQGLAAATANKIIVHLLVNQVITDPLTIEDAAKSWLARYFLAAKRAFLTDITPIQRIDLAAFPIPSPPCSPVIENRLAYATNQFFRDLLSCGVGAPSLADCIPRTSNIVSLLAFALNSAAFTQAANQATTVMPTGIQAFSSQNAPMRIDLAAVALRLLTTVESREPSAQIDAAVASLSNVPTTESLQQFLTATVTATGFTSAEQIAMTKAFATHLHPIFQTSVTTAASEYKAALFAKNLAAMDFSLWNMAEAAIGTMVCRVLTAADGAVNAATTYTEAVAEWSSLLAATQTNATSVRSSFWEFVPAEHAYWTTRDGLITLLNRWNLPYGFSSSRESQLLALLNSEPYGESVANATARLLHLLSRSFAPAGTPELYSTANAWEFVFAMYWSACVCQPLSISTDRCLSAGERSAASNLLAIKRLDFTERPDIRNAVLEQLETVLDVMKQDYAAGTATGLEQYVQSLQSTQSTASIIEVDVEIHSLVEKTILYWLLIKKMSAAGIELSRLANALSSVAGVIVALGSTDENVEIADAPTSLLEFRADAVKLTINYFESVSPLLLSQIETSLGELAEYIGQNAARLVVKTVRILGCITEDFSAESSPIVLFNKTFNSPPSGWTGL* # ORIGINAL: g10218.t1 original gene structure, not modified by PASA NODE_1660_length_9928_cov_40.2003 AUGUSTUS gene 116 1290 . + . ID=g10218;Name=g10218.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS mRNA 116 1290 . + . ID=g10218.t1;Parent=g10218;Name=g10218.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS exon 116 1290 . + . ID=g10218.t1.exon1;Parent=g10218.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS CDS 116 1290 . + 2 ID=cds.g10218.t1;Parent=g10218.t1 #PROT g10218.t1 g10218 AALLAVPMYLSEIAPAKFRGALGTFTQMGVNIGILAADVAGMKSTLGNEDGWRIMFGLTVIPCVFQVLTLPFAPESPWHLFATHREIEAETVIRRLRGASCAQEIEREIAEMKLEAANAQAKHHVSLETTARKAYHVLLLPEMRIPMLVAITLQLAQQLTGINACYYYGNSIFSDAGVSNGDLATTLVAVVNIFATLVSVHLVERMGRRSIMIGGLIGMAVSYGILTISLSLRDVTGMGDLSVAAIMLCVISFSAGPGPVPLLMVPEIVPMESRAQAMTVASIFNWLANLSVGLVFPTMNDALGHRTFLPFLGMAVICVVVLYFTMPETKGMTYPEVESTFRRMSFARNHPETHAAFVAVGSPLAADARAAKMSAASEATPLLGSDTVEV* # ORIGINAL: g10220.t1 original gene structure, not modified by PASA NODE_1660_length_9928_cov_40.2003 AUGUSTUS gene 7954 9859 . - . ID=g10220;Name=g10220.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS mRNA 7954 9859 . - . ID=g10220.t1;Parent=g10220;Name=g10220.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS exon 9635 9859 . - . ID=g10220.t1.exon1;Parent=g10220.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS CDS 9635 9859 . - 0 ID=cds.g10220.t1;Parent=g10220.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS exon 7954 9387 . - . ID=g10220.t1.exon2;Parent=g10220.t1 NODE_1660_length_9928_cov_40.2003 AUGUSTUS CDS 7954 9387 . - 0 ID=cds.g10220.t1;Parent=g10220.t1 #PROT g10220.t1 g10220 MSIALNVDQQRDDLRHSAEDLRMQQSRLYTGGLCLTPALEKLYLVKNIPMRMSSGSTQLMNLWEAVQLYTSKASQLAERNYTTLHEGDPDVDFVLYNGMSGLIDGLEASADVYEAQVSSFADDLNQLTVALTISPLCFFVAAVVIVIIPTLMRIEARKDDLMEIFLDLPRRVVRGLILKDHSRLATLTSQEGDTITALSDMDDVLAMAAQAEADGQDTAVSNSEDGGSGRFSFGDTATVREDSAVRRARNRRSSKKSSRFHIFASFANAIKAQRKIVFKGLVLFAVALAYYIALLVLGANLVDDAASNGAQVNWADRRAYISREIFFYVRESAISNSSVAVAEYAATVGNLSERISMINDGLLYGSPLLRVRQSARRSEISSIMFDNACQSEYETRLPDTWPPCDKLGNGVLTHGLQSTMAQYLELARVTMERYVSVPRPFPREEAADTIKHDPVLLTIRQLDWAYMTEPLNRLTQRYADYARNQVETFQKLILILSIIEIFLVALIWMVMFRPMVHVIDDEIRNARSMLLMLPTDNAVELADSIRAFLRKW* # PASA_UPDATE: g10219.t1, single gene model update, valid-1, status:[pasa:asmbl_2265,status:12], valid-1 NODE_1660_length_9928_cov_40.2003 . gene 2387 7721 . + . ID=g10219;Name=g10219.t1 NODE_1660_length_9928_cov_40.2003 . mRNA 2387 7721 . + . ID=g10219.t1;Parent=g10219;Name=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 2387 2462 . + . ID=g10219.t1.exon1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 2387 2462 . + 0 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 2986 3522 . + . ID=g10219.t1.exon2;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 2986 3522 . + 2 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 4305 4778 . + . ID=g10219.t1.exon3;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 4305 4778 . + 2 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 5166 5383 . + . ID=g10219.t1.exon4;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 5166 5383 . + 2 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 5589 5706 . + . ID=g10219.t1.exon5;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 5589 5706 . + 0 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 5921 6114 . + . ID=g10219.t1.exon6;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 5921 6114 . + 2 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 6534 6826 . + . ID=g10219.t1.exon7;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 6534 6826 . + 0 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . exon 7008 7721 . + . ID=g10219.t1.exon8;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . CDS 7008 7455 . + 1 ID=cds.g10219.t1;Parent=g10219.t1 NODE_1660_length_9928_cov_40.2003 . three_prime_UTR 7456 7721 . + . ID=g10219.t1.utr3p1;Parent=g10219.t1 #PROT g10219.t1 g10219 MLRFSPLAVLFACVFAFSLQGHCTEAYKLRIDSVLAPPDYNATVAAIAALSGSVADADIKTSAQLKDTLDSYNVPQDAFMQRSIAVTVLHDNDTVALVNPSTGLPFTVSATSVLASGATDTYTGALCQTINVNANATSRFPSPNVWCNPDGIVRAAATRGVAVFEYLSHNKHTGDLYSGFRAIRFSLNGYPATTNVTTKAFHVTRSLLKVRLINTNAFDDVSANTVFPTLNIELLTSDDNGGVMRLTDGLDATAFVDLTTPRAINGTAMKSLDSTGKKFNGTSISIAGDGFFVSSRFDEVIRVRAVNGVAAFANVRVLTAISGLQLNFTASRAYRPFNRLPVEYNTTINPDAVYLTSFFTVKNQVASSLVVDPMTDTPNSRALRANFQFDVLPVIYIVDAAGNRVTSGPDSSLAAMATVIGGGCVTDGAMTASNGIITFAGSVCTIANNVGLRISATSTAGSALFVDLTAFNVIPDIDLGFIGPSSGTWFWIGGTMETAVAIALEDVAAGLFPSILPGRRSAIKMVFKDDASDVVVGMQFRQDLEGHHSLLHNQQLVVDRLLNRRLQTDLAVDAAICTTSLVAVNTTLVTLPLDLLCALIPREHWRKWSHQMARLLLAVAMATYMRRLAKQIGLHASSGTVWGYLRALFGIVSRRASRVIPSTGSLTKPPTAQPPVAQHTRTATLPSPAGQRGHAVLGVAVGTIDRMRITAADEESADAEGSPLWIPSPAGADATLRTKSVAAGVRDMWGAFEPETPTAPKQVASRAARGGVTVAAQGTRRSLFG* # PASA_UPDATE: g6025.t1, single gene model update, valid-1, status:[pasa:asmbl_3050,status:12], valid-1 NODE_1934_length_8470_cov_41.1532 . gene 220 1065 . + . ID=g6025;Name=g6025.t1 NODE_1934_length_8470_cov_41.1532 . mRNA 220 1065 . + . ID=g6025.t1;Parent=g6025;Name=g6025.t1 NODE_1934_length_8470_cov_41.1532 . five_prime_UTR 220 221 . + . ID=g6025.t1.utr5p1;Parent=g6025.t1 NODE_1934_length_8470_cov_41.1532 . exon 220 374 . + . ID=g6025.t1.exon1;Parent=g6025.t1 NODE_1934_length_8470_cov_41.1532 . CDS 222 374 . + 0 ID=cds.g6025.t1;Parent=g6025.t1;5_prime_partial=true NODE_1934_length_8470_cov_41.1532 . exon 598 738 . + . ID=g6025.t1.exon2;Parent=g6025.t1 NODE_1934_length_8470_cov_41.1532 . CDS 598 738 . + 0 ID=cds.g6025.t1;Parent=g6025.t1 NODE_1934_length_8470_cov_41.1532 . exon 931 1065 . + . ID=g6025.t1.exon3;Parent=g6025.t1 NODE_1934_length_8470_cov_41.1532 . CDS 931 1065 . + 0 ID=cds.g6025.t1;Parent=g6025.t1 #PROT g6025.t1 g6025 WWALGIVCYEMLNGQPPFQADDVEALFEMILTQNVQYPSHFSELTISFVSGLLERDPASRLGYGMKDGEAVMRHKFLTSIDFAKLNSMEVAPPFIPTVSNDLDVSNFDAMFTKEPAVLTPNQQAFHDAAFNGFSYQATGEHL* # PASA_UPDATE: g6028.t1, single gene model update, valid-1, status:[pasa:asmbl_3051,status:3], valid-1 NODE_1934_length_8470_cov_41.1532 . gene 4423 7674 . - . ID=g6028;Name=g6028.t1 NODE_1934_length_8470_cov_41.1532 . mRNA 4423 7674 . - . ID=g6028.t1;Parent=g6028;Name=g6028.t1 NODE_1934_length_8470_cov_41.1532 . five_prime_UTR 7531 7674 . - . ID=g6028.t1.utr5p1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 7451 7674 . - . ID=g6028.t1.exon1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 7451 7530 . - 0 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 7180 7241 . - . ID=g6028.t1.exon2;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 7180 7241 . - 1 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 6859 6998 . - . ID=g6028.t1.exon3;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 6859 6998 . - 2 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 6537 6734 . - . ID=g6028.t1.exon4;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 6537 6734 . - 0 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 6281 6401 . - . ID=g6028.t1.exon5;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 6281 6401 . - 0 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 5965 6078 . - . ID=g6028.t1.exon6;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 5965 6078 . - 2 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 5575 5814 . - . ID=g6028.t1.exon7;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 5575 5814 . - 2 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 5164 5415 . - . ID=g6028.t1.exon8;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 5164 5415 . - 2 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . exon 4423 5013 . - . ID=g6028.t1.exon9;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . CDS 4658 5013 . - 2 ID=cds.g6028.t1;Parent=g6028.t1 NODE_1934_length_8470_cov_41.1532 . three_prime_UTR 4423 4657 . - . ID=g6028.t1.utr3p1;Parent=g6028.t1 #PROT g6028.t1 g6028 MAAIDDLQLQNAKAYLLQTSTESNLNLYDHLSEVLMKLLEERPDNVVDIFENISKEVKRSKFHQKPDAGSGPILPAPEENTHVTLARTQVKLFATTQETEDGDVEPEPLQEGQLPDVAESMYFFEQTGVGLGREEGFRIMLALKRLAETEPVSTVRFWGKLFGISSNYYIAETEYKGGEGEEESADAAAEETTHDEDEDVEAKTAEQSNLPQYKAPPAIPKETIGSGVNKYTYYVCRAPGEAWVKLPHVTPAQIVAARHIRKFLTGKLDAKIVSYPPFPGNEANYLRSQISRISAATHVSPLGFYTFEEEEEEAEEPDSRDAFVVNPDFEGLSAPEMADQSLANWTHHAQYILPQGRCSWFNPTQNSGEQLSDNEDEEENEEPDDAEPESGPGLLTPLSEDADINGIPAWSVKIASGILPQYSCVGLRSNRWPGAFAYATGKKFGNVYIGYGQKYSVEPHTPLAPPVPQVEYAEGKEIHEATDPTVEEEEAAKAEGDEDGPGNESDGGSDDHESDEEDDD* # PASA_UPDATE: g6029.t1, single gene model update, valid-1, status:[pasa:asmbl_3049,status:12], valid-1 NODE_1934_length_8470_cov_41.1532 . gene 7979 8362 . - . ID=g6029;Name=g6029.t1 NODE_1934_length_8470_cov_41.1532 . mRNA 7979 8362 . - . ID=g6029.t1;Parent=g6029;Name=g6029.t1 NODE_1934_length_8470_cov_41.1532 . five_prime_UTR 8341 8362 . - . ID=g6029.t1.utr5p1;Parent=g6029.t1 NODE_1934_length_8470_cov_41.1532 . exon 7979 8362 . - . ID=g6029.t1.exon1;Parent=g6029.t1 NODE_1934_length_8470_cov_41.1532 . CDS 7996 8340 . - 0 ID=cds.g6029.t1;Parent=g6029.t1 NODE_1934_length_8470_cov_41.1532 . three_prime_UTR 7979 7995 . - . ID=g6029.t1.utr3p1;Parent=g6029.t1 #PROT g6029.t1 g6029 MGIQEYDEDLRQAIAGAELLPHDGIKSPCRGAYVPKTVGKTYVLYYQQDSSKDYNHVIGVCTCFRMWDLGVRGLHKGVLRFYYEKNHIIAVGSRSPFAKGVMPAGIKPLQLKKP* # ORIGINAL: g6026.t1 original gene structure, not modified by PASA NODE_1934_length_8470_cov_41.1532 AUGUSTUS gene 1383 2485 . - . ID=g6026;Name=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS mRNA 1383 2485 . - . ID=g6026.t1;Parent=g6026;Name=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 2395 2485 . - . ID=g6026.t1.exon1;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 2395 2485 . - 0 ID=cds.g6026.t1;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 1999 2258 . - . ID=g6026.t1.exon2;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 1999 2258 . - 2 ID=cds.g6026.t1;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 1586 1838 . - . ID=g6026.t1.exon3;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 1586 1838 . - 0 ID=cds.g6026.t1;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 1383 1417 . - . ID=g6026.t1.exon4;Parent=g6026.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 1383 1417 . - 2 ID=cds.g6026.t1;Parent=g6026.t1 #PROT g6026.t1 g6026 MNAFRLLGDISHIVAIFLLLWKMYKTRSCAGISLKSQILFAIVYITRYLDLFTNFISLYNSAMKVLFISASVATVYLMVYNYRITYDKTHDIVRLEFLLIPCLLLSLVANYEFTIMEVLWTFSIYLEAVAILPQLFMVQRSGEAESITSHYLFALGSYRALYLLNWVYRFYTDGHFDWIAVVAGIIQTVLYCDFFYLYITKVLQGKKLKLPA* # ORIGINAL: g6027.t1 original gene structure, not modified by PASA NODE_1934_length_8470_cov_41.1532 AUGUSTUS gene 2939 4328 . + . ID=g6027;Name=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS mRNA 2939 4328 . + . ID=g6027.t1;Parent=g6027;Name=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 2939 3076 . + . ID=g6027.t1.exon1;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 2939 3076 . + 0 ID=cds.g6027.t1;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 3168 3240 . + . ID=g6027.t1.exon2;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 3168 3240 . + 0 ID=cds.g6027.t1;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 3329 3417 . + . ID=g6027.t1.exon3;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 3329 3417 . + 2 ID=cds.g6027.t1;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS exon 4206 4328 . + . ID=g6027.t1.exon4;Parent=g6027.t1 NODE_1934_length_8470_cov_41.1532 AUGUSTUS CDS 4206 4328 . + 0 ID=cds.g6027.t1;Parent=g6027.t1 #PROT g6027.t1 g6027 MELVSSFPHPPPYYRRYGSDAVSSGTAPPPPPVIDGLYSMFGTSRRTDEKIILSLEDQNLRRLYPAGDDFDRIKELKKLNMSIVFNFMELLDVLVKNPEAQRDSRSLADAPIDDLLKQYAQMSSDEWDALLYANCRPSLS* # ORIGINAL: g12810.t1 original gene structure, not modified by PASA NODE_3331_length_3716_cov_41.6668 AUGUSTUS gene 255 766 . + . ID=g12810;Name=g12810.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS mRNA 255 766 . + . ID=g12810.t1;Parent=g12810;Name=g12810.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 255 377 . + . ID=g12810.t1.exon1;Parent=g12810.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 255 377 . + 1 ID=cds.g12810.t1;Parent=g12810.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 607 766 . + . ID=g12810.t1.exon2;Parent=g12810.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 607 766 . + 1 ID=cds.g12810.t1;Parent=g12810.t1 #PROT g12810.t1 g12810 YILGAKKTGFIVEHDFIMATYLADRVIVFDGQPSVDARANTPQSLVNGMNQFLKQLDITFRRDPTNYRPRINKLESVKDKEQKYAGNFFFLED* # ORIGINAL: g12811.t1 original gene structure, not modified by PASA NODE_3331_length_3716_cov_41.6668 AUGUSTUS gene 1572 3511 . - . ID=g12811;Name=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS mRNA 1572 3511 . - . ID=g12811.t1;Parent=g12811;Name=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 3455 3511 . - . ID=g12811.t1.exon1;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 3455 3511 . - 0 ID=cds.g12811.t1;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 3083 3274 . - . ID=g12811.t1.exon2;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 3083 3274 . - 0 ID=cds.g12811.t1;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 2154 2881 . - . ID=g12811.t1.exon3;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 2154 2881 . - 0 ID=cds.g12811.t1;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 1837 1927 . - . ID=g12811.t1.exon4;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 1837 1927 . - 1 ID=cds.g12811.t1;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS exon 1572 1709 . - . ID=g12811.t1.exon5;Parent=g12811.t1 NODE_3331_length_3716_cov_41.6668 AUGUSTUS CDS 1572 1709 . - 0 ID=cds.g12811.t1;Parent=g12811.t1 #PROT g12811.t1 g12811 MFIDRPAKNGNAQAIANVQELLRELCLRRMKATLINGKPLLVLPPRHVFVNKLEFAAEELEVYNAMEEQGRLIFNSYLKNHSALTNYAHVLELLMRLRQLCDHPSLCASRPLSEAEIELGKKHGIDYTDPIVVRLVELLRNNNEDSCPICLDPYEDTVITPCGHCFDKKCITEVLQRGGTCPFCRQSVNTTQLIAAPPEIEAADAPASQDAKGKGRVSAEEEALKPSTKVTALLEFLAATRTKDPTIKNVVFSQWTSMLKLLERPLREAGFGFVKLDGAMRREKREASIAAFNEDPTVTVFLVSLKCGGVGLNLVAASQVFMLDPWWNPSIEDQAIDRVYRLGQFRPVHVFRFVIKDSVEERILELQARKREIVAATLGADKASKELQEVKLDDLRRLFNA* # ORIGINAL: g11353.t1 original gene structure, not modified by PASA NODE_2938_length_4687_cov_43.4343 AUGUSTUS gene 2720 4523 . + . ID=g11353;Name=g11353.t1 NODE_2938_length_4687_cov_43.4343 AUGUSTUS mRNA 2720 4523 . + . ID=g11353.t1;Parent=g11353;Name=g11353.t1 NODE_2938_length_4687_cov_43.4343 AUGUSTUS exon 2720 4387 . + . ID=g11353.t1.exon1;Parent=g11353.t1 NODE_2938_length_4687_cov_43.4343 AUGUSTUS CDS 2720 4387 . + 0 ID=cds.g11353.t1;Parent=g11353.t1 NODE_2938_length_4687_cov_43.4343 AUGUSTUS exon 4521 4523 . + . ID=g11353.t1.exon2;Parent=g11353.t1 NODE_2938_length_4687_cov_43.4343 AUGUSTUS CDS 4521 4523 . + 0 ID=cds.g11353.t1;Parent=g11353.t1 #PROT g11353.t1 g11353 MAEPYGPIETVDVTDADVEDALPNAATVHIGEGPVCDLGRDGNGDGPRAPHGAHDAGDGASEGVDGHVPRTPAAAHALYHGKPRTPAQLVDRSHSASIDSLFRQAILPHHVSASDPHSPLKRSTSTSLSRSSSGVELHRIRSDARISSPQPLQQHPQQQQQGDQRQSKTATGQGSIAGLNLSTTRLSQLEDTVGSIAGSHDGEPSRRRTALLARLFNPRRESTMNSSLSATTSTTGSQGFPSDGSTPGGPSVARKRRERGNASWNIFRNSYAPRLSLAKRPDVKKNTLDEAELWRALRGPTLGERIDKIVQAPPVVALMLVCTLWVLFIDDVQILALPKSSDKAVGGVSFAVFLLFILEFVLLCVGQKFNFIGKLFFFLDLLAILSLLPSVLEYFGLANISAAIRNLALARAGRAARAGARAGRIMRISRISRLFRKREAEVKRGSTSRVQEAQTATRVGARLQTSTSNKYTVALLLLLLIFNLTSDSTDNSSKAILSGLQELCHNSNLTTVANYELNMYIDMFPDIMCVVLPYTTRVIWGTPEAITHDLRDIDYV* # PASA_UPDATE: g11352.t1, single gene model update, valid-1, status:[pasa:asmbl_5266,status:12], valid-1 NODE_2938_length_4687_cov_43.4343 . gene 95 1961 . - . ID=g11352;Name=g11352.t1 NODE_2938_length_4687_cov_43.4343 . mRNA 95 1961 . - . ID=g11352.t1;Parent=g11352;Name=g11352.t1 NODE_2938_length_4687_cov_43.4343 . five_prime_UTR 1889 1961 . - . ID=g11352.t1.utr5p1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 1745 1961 . - . ID=g11352.t1.exon1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 1745 1888 . - 0 ID=cds.g11352.t1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 1518 1607 . - . ID=g11352.t1.exon2;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 1518 1607 . - 0 ID=cds.g11352.t1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 1288 1386 . - . ID=g11352.t1.exon3;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 1288 1386 . - 0 ID=cds.g11352.t1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 957 1062 . - . ID=g11352.t1.exon4;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 957 1062 . - 0 ID=cds.g11352.t1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 534 626 . - . ID=g11352.t1.exon5;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 534 626 . - 2 ID=cds.g11352.t1;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . exon 95 225 . - . ID=g11352.t1.exon6;Parent=g11352.t1 NODE_2938_length_4687_cov_43.4343 . CDS 95 225 . - 2 ID=cds.g11352.t1;Parent=g11352.t1;3_prime_partial=true #PROT g11352.t1 g11352 MLQACVRVGGHLRRHVRTAAARTVRLCVAVAPESRGHVALYATLVRRTDAAAGNALLQSLGGGNTSVAASVLLTEQDPTKLGLSHAGKYYAVSDADYKKLFAAGPRCMKDMQTVFRQVALQVREPALTINEALRSLPKGRMPRFFIDGPRHSGKSMTLAHVTHFCHRMGWLVMYLPYGSDITYRTLDRQRSLTHPGLIDLGENAQVIMQAFHTANAEILKS # PASA_UPDATE: g6640.t1, single gene model update, valid-1, status:[pasa:asmbl_6960,status:12],[pasa:asmbl_6967,status:12],[pasa:asmbl_6968,status:12],[pasa:asmbl_6969,status:12],[pasa:asmbl_6970,status:12], valid-1 NODE_40_length_53883_cov_42.5593 . gene 18242 33693 . - . ID=g6640;Name=g6640.t1 NODE_40_length_53883_cov_42.5593 . mRNA 18242 33693 . - . ID=g6640.t1;Parent=g6640;Name=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 33447 33693 . - . ID=g6640.t1.exon1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 33447 33693 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 33104 33364 . - . ID=g6640.t1.exon2;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 33104 33364 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 32835 32959 . - . ID=g6640.t1.exon3;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 32835 32959 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 32608 32724 . - . ID=g6640.t1.exon4;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 32608 32724 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 31404 32402 . - . ID=g6640.t1.exon5;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 31404 32402 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 29262 31252 . - . ID=g6640.t1.exon6;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 29262 31252 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 28794 29127 . - . ID=g6640.t1.exon7;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 28794 29127 . - 1 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 20900 28691 . - . ID=g6640.t1.exon8;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 20900 28691 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 19736 20800 . - . ID=g6640.t1.exon9;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 19736 20800 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 19465 19625 . - . ID=g6640.t1.exon10;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 19465 19625 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 19114 19306 . - . ID=g6640.t1.exon11;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 19114 19306 . - 0 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 18744 19022 . - . ID=g6640.t1.exon12;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 18744 19022 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . exon 18242 18604 . - . ID=g6640.t1.exon13;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . CDS 18321 18604 . - 2 ID=cds.g6640.t1;Parent=g6640.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 18242 18320 . - . ID=g6640.t1.utr3p1;Parent=g6640.t1 #PROT g6640.t1 g6640 MDGSALVPAADGDAPLAPLVRHIRAFAALTLVGFAHPADVDGAALESALRDADNAAKIARFASDAKTPALVVRREDAHRDGDDDTAVHTAFSVSTEVKYEAGKGACVAFIKRGAVIETDKPIAPQVRYIDLGEGSPYETLHAYLHNAVAPFFTSFLGVHGKDGDSDASGGASGVKKKIAELEVSLLHLQQNTDIPEVILAIHPRLASEIDRAHHDGRRVKTEDFADVANEASFLNALQTYVGRWIKEIQKVTKLERDPSTGTAMQEMSFWLNLERALLRVSDELKSDGIQTTLALLKNAKRFHATTGFDSDTGLAKALHVVNNYNQLMRDFPLSSLLSATETERIAAAVGDMFMHLRKLRSTTSYPLERATAFVEAISRDVALQVARVLRTRRLFHMPYEEFERTMSGVAEVFTAWEGQLVAFKDMCRDIFQKRIDQKKVQIRIDQPEHEALVERLRDLRAFRKQYEQLRAVVARVLRPGDSRREAGAAEFGSDAAASAVDDISRAYDDVASVDPLDVSRDGSEAWEAALARFDERVGRVETHITSHLRDQLGTAKNANEMFRIFSRYNALFVRPRIRGAIQEYQAKLIGRVKEDIQGLQEKFKAQYAQSPGCRMATARDLPPVTGAIIWARQLDRQLATLMRRVEDVLGKGWEAHVEGQRLKEDGDNFRRKLDVQGLFKEWVEDTESRRLQPGGVLFSILAVRFRGAAAVSGAPQTALRLAVNFDQQLVTLFKEVRNLQYLGFRPPNSVVTAATAARDIYPHAVSLIETVRGYGLVCDTLTDNEWLSPLVAAYVKDAHLLISEGVGQHWESMRLESFVRRLSESVSVLRDRTEEMVAIAGRITSATDGLSSCALIAEAIGRHLAAIQDAVDELNLKMYSNLGAWVARLDKRIEELLGARILEALSQWTASFLGLASDDDGRPDGDAESGVPSPAVGLAQVAFPSLVHEIRVRNQVMFLDPPLEQSRASLHAHLHSVLARICGHMRLRAARFSVAGGAGGSGGSGLTPSSSSALSSGHDHTDDYRALLASLPDDGALLSRAYEAIEDRLRRATAYVSVWLRYQSLWDMEPGAVYGRLGDDLATWQRLLNEIRTARATFDNSETKRSFGPIVVDYGQVQAKVNLKYDAWHKDVLGKFGAKLGAAIQELFAEVAQSRTTLESHSIEGDSTSDAVTFVTFVQDLKRKTRAWEGRVRTYRDGQRLLERQRFQFPADWTHIDQLDSEFGAFSDILGRKDTSIQERIASLQARVVAEDRAIDAKSLEMCEEWDVSKPVRGDLRPDMALSTLSSLESKFVRVRDDWAKMARAKEALGLETPSANRVEGCLAELQDLRGVWAEMAKVSGALDELRERPWTSVVPRKVRQALDDLSAQLKALPSRMRQYAAYDNARQKLKDLLKANSLVADLKSEAIKDRHWKALTKRLGVRWGVSELSLGMLYDVDLVRNEKVVREFVTIAQGEMALEEYLRSVRETWNAYELELVNYQNKCRLVRGWDDLFGKIKEHLGGVTQMKLSPYYKVFEEDASGWEERLNRVNALFDVWIDVQRRWVYLEGIFAGSADIKHLLPAETARFASVGAEFTALLRKVAKSPLVLEVLAIPNVQRSLERLADLLSKIQKALGEYLEKEREQFPRFYFVGDEDLLEIIGNSRDLGKIQKHLRKMFAGINTVVLDDASETILGMCSREGEVVTFVTPVSVKNNPRINEWLSLLEREMRHTLASLLVDAVGTLPAQFGTVVPARADAGALVEWIDRYPAQLVVLALQVAWSQAVEAVLAKGGSTAGVSAVVASLERTLGGLADTVLVEQPQVRRRKLEHLITELVHERDITRGLASAAEATGPQSFTWLQHMRFYFDASRPDVLERLSIRMADASFHYGFEYLGIADRLVQTPLTDQCYLTLTQALHERLGGSPFGPAGTGKTETVKALGCQLGRFVLVFNCDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERMLSAVSQQIQTIQTALRDNAGKPDAAISIELIGKPVRVNAAMGIFITMNPGYAGRSNLPDNLKRLFRNIAMTSPDRQMIAQVMLYSQGFRSAETLAGKIVPLFKLCDEQLSSQPHYDFGLRALKSVLVSAGHIKRVGLVSKVSGVAGGEQQPESVASETRVEQEVLMRSVCETMVPKLVAEDIPLLHSLLADVFPGVHHAPVDMQKLREVAQSVCAESFLVFSEEWAEKVLQLHQIQLLHHGVMMVGPSGTGKTSAWRVLLKALERVEGIDGIAHLMDPKAISKDELYGTLDPTTREWTDGIFTHTLRKIIDNVRGEAGQRHWIIFDGDVDPEWVENLNSVLDDNRLLTLPNGERLGIPPNVRIMFEVQDLRYATLATVSRCGMVWFSAQTVTDDMVFAQYLARLRAVPLDGSPAGAESTALTVQRDCADILAPLFAADALIPKAIEYAERLERIMPSTRLRMAGSLFSMLNADVRFVLEYNALHPDFPMEAERVERVIQKRAVLSVLWCLAGDASLKGREQLGDFLRSLTSIPMPPTNAPVIDYDVSVAGEWVAWKVPQTEVDTHRIAAADVVVPTVDTVRHEHLLKAWLAEHRPLVLCGPPGSGKTMTLFSALRAMPELDVVGVNFSSATTPELILRTFEHHCEYRRTPSGTVLAPTQPSKWLVLFCDEINLPDQDKYGTQRVISFIRQLVEHGGFWRAKPDHSWVSLERIQFVGACNPPTDPGRKPLSARFLRHVPVLLVDYPGQVSLGQIYGTFNRALLRLVPSLRPLTTPLTDAMVELYLASQQRFTADVQPHYVYSPRELTRWVRGLHEAIKPLESLTADGLVRLWAHEALRLFQDRLVAEDERRWTDEKIDEVAAKHFVGVDLRSALARPILFSNWLSKEYISVDRERLREYVRARLKVFHEEELDVQLVLFNEVLDHVLRIDRVFRQTQGHLLLIGASGAGKTTLSRFVAWINGLSVFQIRAHAKYTSADFEDDLRAVLLRAGCGGERICFVMDESNILDSGFLERMNTLLANGEVPGLFEGDEFAALMTQCREGAQRQSLMLDSQDELYAWFTQQVMRNLHVVFTMNPTTDGLKDRAATSPALFNRCVLDWFGDWSEHALYQVGKEFTGRLDLDAGSYVPPQPFPASLAEVPAHPSQREALASAFVFVHKSVHEAAKRLSRRDGRTTHVTPRHYLDFIDHYVSLFGEKTRDLEEQQLHLNVGLRKITDTVGQVEEMQSSLAAKSAELERKNTQANSKLQQMVHDQQEAERRRQASLEIQSALAVQTRAVSEKRAVVLEDLSKVEPAVEEAQRSVKSIKKQHLVEVRAMANPPKMVKMALEAICVLLGEDSIDWKAIRSVIVRDDFISNIVSFKTDDVKDSQRERLIREYLSNPEFTVENVNKASKACGPLCQWAVAQVQFADMLKKVAPLREELASLERSAEETRLRDVELNRMVAELEASIGRYKEEYAVLISEVQAIKSEMTSVRAKVDRSIALLGSLGDERSRWLSESESFRAQMSTIVGDVLLSAAFMAYGGYFDQQYRFGLVGRWSTHLHRCSLSYRGDLSLSEYLSTPDDRLSWQSHSLPADDLCTENAIMLRRHKRYPLVIDPSGQALKFILSVYGDRRIARTSFLDDSFRKNLESALRFGTPLIVQDVEAYDPILNPVLNRELRRAGGRVLIRIGDQDIDFSPSFSLFLFTRDQTAEFPPDLCSRVTFVNFTVTPASLQTQCLNQVLRTERPEIDAKRSDLLKLQGEFRLRLRHLEQELLRALNEARGKILDDDAVIATLETLKKEASEVSRKVADTDLIMIEIEQASAEYRPLATACSALYFMMESLGQAHFLYQYALQSFLDMYSSVLSAPRTAAHGSTPQSRLATIAEDVFRVVYTRLSRGMLQADHPLLAFLIAGIRIRGSADDPSEDELTHLMRGREANGAQAAGGAVPSPLTVDCAGQLRALQGLASFGSGLSQHVTAHNAEWAEFLKSPQAEMCVPQCWNGAKIGVSDSRSIFRELLVVQAFRPDRLVAAVWKYATSVFGSNFFRDAGSVLDLGRVAATEVHAHTPILMCSVAGYDAGNRVIELAASASARLSSVAIGSAEGFVQADRAVAAAVKSGEWVLLRNVHLAPQWLVSLEKRLHALGAPNPQFRLFMTAEIIPALPPSMLRMSRVLVVEPPPGVRANLLRSYAQAPSAIVSRGPAERARVHFMLAWLHAVLQERLRYVPLGFTKRYEFGESDLRSAMAMVDAWVEAAARGRANLPPDQIPWDAIATLIQQSIYGGRIDNPFDARVLRSFLNRFFTAKVFEADFELVRGRESICAPDGVRSEDFVRWADGLSESQTPEWLGLPANAETVMLETAGNALVAKILKMQTMADEDELAPVADAVQVDLDGKPSWMRQLHATAVAWLGAIPESVPLLQRSPTNIKDPLFRFFEREGVVGATLLARVRGDLSHILNVSNGRLKQTNDIRRLMSDLVKGNIPPEWRRYPIPNGLTVGAWMVDFAARLGQLQAVAAAPSPSVVPVWVGGLFFPEAFVTATRQAVAQSTGHSLEELALELHIGDGGDGAFSVTGLDLEGAAWNEGRLDTSATGAMRLAGAAIAWRKCGDSSNGRDNEAGRVTVPIYLNSTRANLLFTVDLPMKPALDADAFYQCGVAITCSSLRGGV* # ORIGINAL: g6639.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 17052 18218 . + . ID=g6639;Name=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 17052 18218 . + . ID=g6639.t1;Parent=g6639;Name=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 17052 17238 . + . ID=g6639.t1.exon1;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 17052 17238 . + 0 ID=cds.g6639.t1;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 17332 17382 . + . ID=g6639.t1.exon2;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 17332 17382 . + 2 ID=cds.g6639.t1;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 17479 17580 . + . ID=g6639.t1.exon3;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 17479 17580 . + 2 ID=cds.g6639.t1;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 17739 17798 . + . ID=g6639.t1.exon4;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 17739 17798 . + 2 ID=cds.g6639.t1;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 17992 18218 . + . ID=g6639.t1.exon5;Parent=g6639.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 17992 18218 . + 2 ID=cds.g6639.t1;Parent=g6639.t1 #PROT g6639.t1 g6639 MKENTSVALWGSRIVLVPYKKHHVEKYHNWMQSAELQQLTASEPLTLAEEYEMQERWEQDEDKCTFILLRRDFLGATKNESKAAEIEAMIGDVNLFFNDADDRRSAEIEVMIAEPTARGRGLGHDACVAMMNYGVTSLNVGRFTAKIGFDNERSLRMFQRMEFTQISASEVFRETTLERVVSPASQDELTQKATELGFCPQQYACDHQ* # PASA_UPDATE: g6635.t1, single gene model update, valid-1, status:[pasa:asmbl_6955,status:3], valid-1 NODE_40_length_53883_cov_42.5593 . gene 7443 8401 . + . ID=g6635;Name=g6635.t1 NODE_40_length_53883_cov_42.5593 . mRNA 7443 8401 . + . ID=g6635.t1;Parent=g6635;Name=g6635.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 7443 7548 . + . ID=g6635.t1.utr5p1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . exon 7443 7584 . + . ID=g6635.t1.exon1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . CDS 7549 7584 . + 0 ID=cds.g6635.t1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . exon 7678 7718 . + . ID=g6635.t1.exon2;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . CDS 7678 7718 . + 0 ID=cds.g6635.t1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . exon 7802 7879 . + . ID=g6635.t1.exon3;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . CDS 7802 7879 . + 1 ID=cds.g6635.t1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . exon 8045 8401 . + . ID=g6635.t1.exon4;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . CDS 8045 8267 . + 1 ID=cds.g6635.t1;Parent=g6635.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 8268 8401 . + . ID=g6635.t1.utr3p1;Parent=g6635.t1 #PROT g6635.t1 g6635 MSAVNAAKRSTTVRLPPEVNRVLYVRNLPYKISAEEMYDIFGKYGPIRQIRIGTAADTKGTAFVVYDDIFDAKNACEHLSGFNVLGRYLVVLYYQTTKAFSKVDRSKEKEQLERVKEKYGISTEQ* # PASA_UPDATE: g6644.t1, single gene model update, valid-1, status:[pasa:asmbl_6963,status:12],[pasa:asmbl_6964,status:12], valid-1 NODE_40_length_53883_cov_42.5593 . gene 46887 49717 . - . ID=g6644;Name=g6644.t1 NODE_40_length_53883_cov_42.5593 . mRNA 46887 49717 . - . ID=g6644.t1;Parent=g6644;Name=g6644.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 49638 49717 . - . ID=g6644.t1.utr5p1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 49558 49717 . - . ID=g6644.t1.exon1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 49558 49637 . - 0 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 49286 49341 . - . ID=g6644.t1.exon2;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 49286 49341 . - 1 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 48959 49146 . - . ID=g6644.t1.exon3;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 48959 49146 . - 2 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 48733 48876 . - . ID=g6644.t1.exon4;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 48733 48876 . - 0 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 48438 48607 . - . ID=g6644.t1.exon5;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 48438 48607 . - 0 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 48122 48266 . - . ID=g6644.t1.exon6;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 48122 48266 . - 1 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 47729 48026 . - . ID=g6644.t1.exon7;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 47729 48026 . - 0 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 47567 47607 . - . ID=g6644.t1.exon8;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 47567 47607 . - 2 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . exon 46887 47262 . - . ID=g6644.t1.exon9;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . CDS 47164 47262 . - 0 ID=cds.g6644.t1;Parent=g6644.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 46887 47163 . - . ID=g6644.t1.utr3p1;Parent=g6644.t1 #PROT g6644.t1 g6644 MSSQVGLTPELLAAYNDVRSDASDTNWVLFDYVPKANDLKVASTGEGGLEELVEEFNAGRVQYGFAKVIDDKSNLPKTVFIAWTGDGVQSSRKGITAQHIPEVAKFFAGFHVQINARSEADLDAKDILRKVRESSGAFYSAHKEQPKKDVPAVTPVGSVYEKASIVGGNASGIKNRFENAHAAQEEEERKAEEERRLRAEKEKAAREQGERERAEQERADRERAEKARADKERQEKEKAERQREEAAKKQRLEDEAAAKKKADEDRKRAAAADDERRRAEAEAHAQAEEEAEAERQRIAEEEAAAAQAEAEAAAQAEAEAAAQAEAEAAAQAEYAEQNGEEAAPAQESGYSARALYDYQAADETEISFDPGEILTGIEFVDDGWWRGYDKNGAYGLFPSNYVELIQ* # ORIGINAL: g6634.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 1584 7104 . - . ID=g6634;Name=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 1584 7104 . - . ID=g6634.t1;Parent=g6634;Name=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 6403 7104 . - . ID=g6634.t1.exon1;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 6403 7104 . - 0 ID=cds.g6634.t1;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 4348 6207 . - . ID=g6634.t1.exon2;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 4348 6207 . - 0 ID=cds.g6634.t1;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 3791 4216 . - . ID=g6634.t1.exon3;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 3791 4216 . - 0 ID=cds.g6634.t1;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 3059 3640 . - . ID=g6634.t1.exon4;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 3059 3640 . - 0 ID=cds.g6634.t1;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 1584 2912 . - . ID=g6634.t1.exon5;Parent=g6634.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 1584 2912 . - 0 ID=cds.g6634.t1;Parent=g6634.t1 #PROT g6634.t1 g6634 MTGGSRRGVPGRGVHGRGGASRGGYDGHPQRGFQGQRGLHSARGNGVLAGRPSGIPTVQEVEADTITRLAAAHWAPAAMAAGVATPFDAGVVTSIYEKELKGSGFASKRIMLLEISQYMERFLWPNFDTATASVPHVMSIVLMVNEKFRESLHPWAAFAAAPDRFGDFFRRVLGLMLGEGNGGVPLSLQEESFCVVFLVRAINSLEVDLVRDQAQRLVSLGSWHCLLPGRRENEFKTFPKLRKLWNSMAKKDAQADEATRQQRDFERRFLSRLIARFFRVLDGVAPKIAGLTTPAAAASAVSVHELSYCERFLELVTDLEAQLPTRRYFSTLLDDHHFIVRCQLSPLVARAADIGGLFVRLLEMAKFYAGFEINDHTGIALDDADMTDRHYSRIVALQRTAFANIPSLREFALSNVAAVDTRAGLLGHLERLEDGELVQLARLLHLAPLEGDVVAVEDGGVHTRTDRTFLLEMLVAKHERRLSQLEAINAMPLYPTDSILWDESVVPSEYFDGENCLALPKLNVQFLTVHDYLLRNFNLFRLESTYEIREDVVDAVRRLSPRTTETNETVFSGWSRMAMPIDNFSVVEVAKPNLGETVPSAVRADVTINLAQCRQQFRQEWQGQRKHDVLFVVTVRATKAVTDAARDAAEVRRNRLGGALGDALSLGIVRVRGCEVEGLLDDRGKVIEEGFGEKPELRGDRRTFRLWLDPNQYQDDLAADADTYDTFNVLVRRKPKENNFKAILDTIRSMMNTRCVVPDWLHDVFLGYGDPAAASYSQLPGRLTSLNFNDTFLNLDHLRECFPSAVVSCEAQESECVPPFHLKFDRTDSGPLRIVVRPFVEPNRGPYPYNKPKRNTIHFTPVQVEAIHSGMQPGLTMVVGPPGTGKTDVAVQVVSNWYHNFPDQRILIVTHSNQALNQLFEKIMALDIDERHLLRMGHGEEELETDKDFSRGGRVNFILQRRLHLLREVERLAGSLGVATDVAYTCETAGHFFLYQIVARWEAYTQKVRESQRDLRVMADAFPFASYFGDAPQPLFRGSSAAEDWDIAEGCYRHISKVFTELDEFRAFELLRTSSDRTNFLLVKEARIIAMTCTHAALKRGDLVRLGFKYDNVLMEEAAQILEIETFIPLLLQNPEDGRSRLKRVVMIGDHHQLPPVIRNMAFQRFSNMEQSQFARFVRLGVPAIELDKQGRARASIATLYNWRYKALGDLPHVQQRPEFVTANGGFAHDFQFVDVGDFNGQGEITPNPHFYQNLGEAEYVVAVFMYMRLRGYPAESIAILTTYNGQKHLIRDVINARCSWNPLFGRPSVVTTVDRYQGSQSDYVLLSLVRTRAVGHLRDVRRLIVAMSRARLGLYAFGRKALFESCLELAPAMKVLLSRPTVLQLVPSESHPTARVNGSAPTASMVSIADVSAMANLVHSMGSEEAAAIDAAYAARAQDDVPLGGEQEPRADAAADAGGDADAMEGVTAENGNGQHVAAATADAVAVESTAMQVDAPASPAAAADAPPPPAAVDAPTAVEGVVEIPSEPAAGPTEDAAPVEAVSVAPVDVEVAPPAETATANTPKGRKRVREDDGDSGAPASKQSATVALPSPDMKVADLKQALKKRGLSTAGLKADLLQRLTEAMRDSDA* # PASA_UPDATE: g6643.t1, single gene model update, valid-1, status:[pasa:asmbl_6958,status:3], valid-1 NODE_40_length_53883_cov_42.5593 . gene 45576 46833 . + . ID=g6643;Name=g6643.t1 NODE_40_length_53883_cov_42.5593 . mRNA 45576 46833 . + . ID=g6643.t1;Parent=g6643;Name=g6643.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 45576 45799 . + . ID=g6643.t1.utr5p1;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . exon 45576 45896 . + . ID=g6643.t1.exon1;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . CDS 45800 45896 . + 0 ID=cds.g6643.t1;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . exon 46003 46470 . + . ID=g6643.t1.exon2;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . CDS 46003 46470 . + 2 ID=cds.g6643.t1;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . exon 46650 46833 . + . ID=g6643.t1.exon3;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . CDS 46650 46729 . + 2 ID=cds.g6643.t1;Parent=g6643.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 46730 46833 . + . ID=g6643.t1.utr3p1;Parent=g6643.t1 #PROT g6643.t1 g6643 MSIAAVLLEAAELLEKGADAAPSPSEIKSESPDAIVPENSVKNREVHNLLEKNRRAHLKQCFSDLKIAVPTITSNKISTVSILQHASEYIVALRTKHDDYAREMERLKKAKQDALARLAALRTKRRDSVSSVGGDSTGAAPLSPQPSLSLNPDGDAPSPSSHVDIEGLSDADEMSEGLVPSSPRDDADGGLSPPTGAATGKNRLKRLQKKTLPI* # PASA_UPDATE: g6642.t1, single gene model update, valid-1, status:[pasa:asmbl_6961,status:12],[pasa:asmbl_6962,status:12], valid-1 NODE_40_length_53883_cov_42.5593 . gene 35507 44560 . - . ID=g6642;Name=g6642.t1 NODE_40_length_53883_cov_42.5593 . mRNA 35507 44560 . - . ID=g6642.t1;Parent=g6642;Name=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 44485 44560 . - . ID=g6642.t1.exon1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 44485 44560 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 44304 44372 . - . ID=g6642.t1.exon2;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 44304 44372 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 43907 44088 . - . ID=g6642.t1.exon3;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 43907 44088 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 43613 43781 . - . ID=g6642.t1.exon4;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 43613 43781 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 43268 43363 . - . ID=g6642.t1.exon5;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 43268 43363 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 43079 43150 . - . ID=g6642.t1.exon6;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 43079 43150 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 42476 42616 . - . ID=g6642.t1.exon7;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 42476 42616 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 41868 42272 . - . ID=g6642.t1.exon8;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 41868 42272 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 41625 41721 . - . ID=g6642.t1.exon9;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 41625 41721 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 41347 41428 . - . ID=g6642.t1.exon10;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 41347 41428 . - 1 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 40855 40937 . - . ID=g6642.t1.exon11;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 40855 40937 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 40652 40743 . - . ID=g6642.t1.exon12;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 40652 40743 . - 1 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 40380 40544 . - . ID=g6642.t1.exon13;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 40380 40544 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 39926 40140 . - . ID=g6642.t1.exon14;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 39926 40140 . - 2 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 39678 39749 . - . ID=g6642.t1.exon15;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 39678 39749 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 39416 39466 . - . ID=g6642.t1.exon16;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 39416 39466 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 39127 39192 . - . ID=g6642.t1.exon17;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 39127 39192 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 38916 39029 . - . ID=g6642.t1.exon18;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 38916 39029 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 37852 38814 . - . ID=g6642.t1.exon19;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 37852 38814 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 37541 37759 . - . ID=g6642.t1.exon20;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 37541 37759 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 35983 37370 . - . ID=g6642.t1.exon21;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 35983 37370 . - 0 ID=cds.g6642.t1;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . exon 35507 35783 . - . ID=g6642.t1.exon22;Parent=g6642.t1 NODE_40_length_53883_cov_42.5593 . CDS 35507 35783 . - 1 ID=cds.g6642.t1;Parent=g6642.t1 #PROT g6642.t1 g6642 MGDGFYVRAIWAYEAPSPEELSFFDDEFIYVTSWDDEAWYYGQVDERAGWFPSSYVEVVDENGAVTGDSVVLDPTAPQAAVAAAAPPVAPKPTPPAAPVLPTDAEKRLEIERRERAALSTLLDTYTRQPKFGNDKALKKLKANIEDADRKIAQLSTEIDRERALKGSSGDASAPKVSYARVLWEYKAAKSDELSMKEDDVVTITSSDADGQWYFGSIGPASGWFPSSWVAAVDAADVTCVSDSQVDADSDAQWDNEWDDEGDGMELVGADTEGDDIYEALKTEWTAKRGSLGSDHYAEAALAVAAVAGRASAKLQAQEAQEAHAPVTQQTAPQGEEKHASGAMVVQMMPSAQAPSRKWRDLVDADVREAIGKEEVHRQESIYETLKTEEDYVRDLKTIISVFIEPMRKQKIVSQKHLAVLFSNLEQLVPVNEELCGRLQLKTAENVIVEAVGDVFLTLAEFFKFIDAATLREECRGLNLLSYLIKPVQRICKYPLLIREILRHTTPDKPDHQALTKALTKIETVVAIVNEAGRAAEGTKKMLDIQARLKTYDGEPVRLMTPSRRLLRDDLFVEQMQSKRDDRRLLLFNDLLLITRPGKNKLHLISAIEMHACMVFDLDDERDSLDAFEIVHVGRAKYTFMAANPTAKKIWLDDLVELTKEFLERQQEEWQSMDVPEGDVAPLEGHLLQRVGSFRPAGDDEQVSPGEVRRSKVDDGEDTSPPRRRHSFGDASVRSRKTIFAMSVRKPARKDNSAPELAEIEEPIDDASVRKKQKDKDEKEKREREERERKDKEKEERRERERKEKEEKEKEREEREERERKEREIARRGKEESRREREEREKREKEDKEREKELRRLEKKERDERDRKEREEREARDREERREREEREREERKEKEEREREERKERYGREAEERREKYEREREERERLYRERRAGGGPSSTTGSIYYAPSPSQGSQPRTVGGDMPGEPANEAGDVERRRTSSEPTSTFSRPPVAPRHVPSEYAARPQPPVPRASAPASLSPAVVPAPSAALTVPSSPGRHRRRSLYQQGSDAKQQQSNYRVMSCEKLEKNYTYVIRIAAGGGSVEIRRKYNEFFKLHLALLSLFPVEAGSAGGARTIPFLPGQKLIVTEAVAEGRTKELDAYLQALMRMPEKVSACELVCRFLDPFIAKFKETVDAPSASEAAPRPAIAPRPPSVAAPRFALRQPAEEGVREVRAPPRPPPPRAGGAPSPAPRPDIAGGSSAVPIAKVEEDVPRKKTSGASQPPPPEAPASEAPKLSIVIPQRATRPSPLPRPATIVQPAGDEPASPRATHSAFAPARAPALLQRPTPLSPRPTTVIKEDDRPAASPRPSPVTLPAETSRVAQHIQQCMQRDEVKPPPAPTTRPAEGPVVAGSHPKAPPPARPLAPRPDIQRGPAPTTAGSFPARSSFPALASSSSAPVPVSVAPVTASKPLWEAKRATAAPPAEEEPPKTTWRPSGSGGGPPQSATPAAAPGFKSSSPAALSSPAMARPARPTPPATVTVTAAAPAPAPTPAPMSVYATRPAIPSRAGQFGQDAALQRGRSAPDLLSRGSPVPSTLPHTHAPPQYGVPARPAPAIKPGLAAVETGRLSDYGDMADGDTFRMKVKASDERIVAFNFRRGIAFTEVIERVAQKLNVKAASLSLKYCDEDGDIVCILGDDDLQMALGINGGKAVILASTK* # ORIGINAL: g6637.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 9951 14199 . + . ID=g6637;Name=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 9951 14199 . + . ID=g6637.t1;Parent=g6637;Name=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 9951 10602 . + . ID=g6637.t1.exon1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 9951 10602 . + 0 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 10691 10845 . + . ID=g6637.t1.exon2;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 10691 10845 . + 2 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 10954 11079 . + . ID=g6637.t1.exon3;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 10954 11079 . + 0 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 11220 11733 . + . ID=g6637.t1.exon4;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 11220 11733 . + 0 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 11823 12752 . + . ID=g6637.t1.exon5;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 11823 12752 . + 2 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 12862 13212 . + . ID=g6637.t1.exon6;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 12862 13212 . + 2 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 13316 13340 . + . ID=g6637.t1.exon7;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 13316 13340 . + 2 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 13430 13538 . + . ID=g6637.t1.exon8;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 13430 13538 . + 1 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 13663 13801 . + . ID=g6637.t1.exon9;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 13663 13801 . + 0 ID=cds.g6637.t1;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 13904 14199 . + . ID=g6637.t1.exon10;Parent=g6637.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 13904 14199 . + 2 ID=cds.g6637.t1;Parent=g6637.t1 #PROT g6637.t1 g6637 MPHKIKFTVVHCTGADDEHPAAELEVHGPLVRGWQSQRFCPFPQALVLQLAEHSRVRKIQILSHQHKIPSRVELHIGTGDVAHPQPAGSRFLRLGHVSFSSNEQSEYKARELKSVHIDATGHFIKLVIHKNHINKLNLYNQVGIVAINIIGDPAPVEVGGGQGFGNIRGGLHTKTTADVALANVLSAIGQAPSNVDPVLFGIINRNDHIPNTEDLTFDMYQDQEIAELIRNLGRQKDDCVASEKYDEAKRLKGVVDILHRAGEELGKLEVRKKQAVAAEDYDLAMRIKNNADDVRTKLYAHLGIGSNGRIMQKPLEHELRHMTSTVAHNYQSANALGSQLSFGSADLLPVHHVPRLPFDGQEEIPARTAPAAPLPEEAPLVRVTSRTQGDPNDDRPLNVKPGGVLVDADGDDGADVDGLITPMKAPPSSKPALNTPSPRGPARKDPNDDRPLPKKGAVAMKDAAVSPPASKRPRAESGMEDDDGASRAGAADAPEELTEKQLRELADIVEIFGRDIATLAHSKVWAHRESAFERVIEELRNPDETETMDRGAVYRAAIGLCVRGMGDKIAHVFLKGLELFGALTADPRATKGELTAAADKMLPLLILRTGDITPRTRDAALEAVVQAATRPVLKPVVVTNLIGNPKKPLATRIIRGKLEALEKLLEGGLDEDAGLSVAETMKSLRTMLGHASGEVRDAAVKAVLAMYRVCGPPIESHLKGIRPQLLEALNEGFDAIDGRAKRTKKVLPKKDPEKEKEETVRKLQEQLAELRQLAALAASGKSTVAAKKPNVDAIDEETEPDSTPSSSFKGKKLPAKAPVKASVGTKKSAGFPAAKPKGPVATVRSRSRTASVRSGASSRSSVYSDEDAEEDGRSSVASSVPPKRTAATKLTLQRTTSVTSGRSSVASMRGAKGPPIEKTCIFCAEHNESFTEDALDIHYWKSCPMLTQCMLCKQIVEVAVLRDHHLSECEYKGEMRQCRRCQEAVNRSEYEAHVKAKHCLVAQPLSVANRCPLCHNNIPPGDAGWKKHLMGADPCGESTRVRREAVAPKPRADAKKKTVPATRLPGPNSSAPSRQPPITKSKIPLPGNRGRSTTVVVK* # PASA_UPDATE: g6641.t1, single gene model update, valid-1, status:[pasa:asmbl_6971,status:12], valid-1 NODE_40_length_53883_cov_42.5593 . gene 34137 35467 . + . ID=g6641;Name=g6641.t1 NODE_40_length_53883_cov_42.5593 . mRNA 34137 35467 . + . ID=g6641.t1;Parent=g6641;Name=g6641.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 34137 34169 . + . ID=g6641.t1.utr5p1;Parent=g6641.t1 NODE_40_length_53883_cov_42.5593 . exon 34137 35467 . + . ID=g6641.t1.exon1;Parent=g6641.t1 NODE_40_length_53883_cov_42.5593 . CDS 34170 35207 . + 0 ID=cds.g6641.t1;Parent=g6641.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 35208 35467 . + . ID=g6641.t1.utr3p1;Parent=g6641.t1 #PROT g6641.t1 g6641 MHATARLPPRAASAVGVIVAIVALVGFVGIASADTLNSRCVSLCNSARPLNANTTYRTQTASCDDLCYEVGATGAVREPLKSLLANARDRILAQWASLASSRGDAQALSSDLEKAATSTQLQAVFDRVRLLNGARSARVSAALAHAGSDIIASWRTTIVQLGGASVVGDDAIARWQAMSAAWNNFLAVEVGGEANVTAALNRTCRALVVTRRTIASLPNVASNALAYFTLATLWDQALLSAWEYLIVVVGVRQSSDASQITAAMNAFKASEREYLAMATGFFSELRGSAYETAAVDGFAAGIVSYNDEVGASYGGGSGNRIGAPALALFAAAAAVAWAASHVTAV* # ORIGINAL: g6636.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 8618 9049 . - . ID=g6636;Name=g6636.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 8618 9049 . - . ID=g6636.t1;Parent=g6636;Name=g6636.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 8618 9049 . - . ID=g6636.t1.exon1;Parent=g6636.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 8618 9049 . - 0 ID=cds.g6636.t1;Parent=g6636.t1 #PROT g6636.t1 g6636 MGCGSSKGADVQGGGAEAQKTPNGASVKTTVPQQAAQRQTPPAKDDASQVGSGAPPPAGPPLSAPTVGDEASANAGRRMAGDGGMRRKDSGTLTSTFVQAQRKPSEANAVTQTRSQESFFKMLEAKIKAGGGEVPVHSESEDD* # ORIGINAL: g6633.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 150 1526 . + . ID=g6633;Name=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 150 1526 . + . ID=g6633.t1;Parent=g6633;Name=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 150 316 . + . ID=g6633.t1.exon1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 150 316 . + 2 ID=cds.g6633.t1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 457 546 . + . ID=g6633.t1.exon2;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 457 546 . + 0 ID=cds.g6633.t1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 625 764 . + . ID=g6633.t1.exon3;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 625 764 . + 0 ID=cds.g6633.t1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 873 926 . + . ID=g6633.t1.exon4;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 873 926 . + 1 ID=cds.g6633.t1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 1056 1177 . + . ID=g6633.t1.exon5;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 1056 1177 . + 1 ID=cds.g6633.t1;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 1273 1526 . + . ID=g6633.t1.exon6;Parent=g6633.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 1273 1526 . + 2 ID=cds.g6633.t1;Parent=g6633.t1 #PROT g6633.t1 g6633 LVFIANPFSEEEQRQWVRRCLRDYTRDLAHSNLADPSLNGDAELCFFDREAAELNRVCHVRGRRKSALEKLRWTTLGFHYDWTRKVYDEQLRSPFPHDLACLTTRIATALGFASFEPQAAIVNYYALNSQMSGHTDHSELNLEAPLLSISFGNSAIFLLGGPSRCDPAVPILIRSGDIVVMAGQSRLCYHGVPRILENSAPAHLTSTDDPTWAPLARFIATARINANVRQVTFPGRNFAESTLEHTGASADESHRAKPTPDPQPTITESMTFSG* # PASA_UPDATE: g6638.t1, single gene model update, valid-1, status:[pasa:asmbl_6959,status:3], valid-1 NODE_40_length_53883_cov_42.5593 . gene 13870 15257 . - . ID=g6638;Name=g6638.t1 NODE_40_length_53883_cov_42.5593 . mRNA 13870 15257 . - . ID=g6638.t1;Parent=g6638;Name=g6638.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 15195 15257 . - . ID=g6638.t1.utr5p1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . exon 15132 15257 . - . ID=g6638.t1.exon1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . CDS 15132 15194 . - 0 ID=cds.g6638.t1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . exon 14947 15006 . - . ID=g6638.t1.exon2;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . CDS 14947 15006 . - 0 ID=cds.g6638.t1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . exon 14811 14873 . - . ID=g6638.t1.exon3;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . CDS 14811 14873 . - 0 ID=cds.g6638.t1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . exon 14615 14723 . - . ID=g6638.t1.exon4;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . CDS 14615 14723 . - 0 ID=cds.g6638.t1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . exon 13870 14467 . - . ID=g6638.t1.exon5;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . CDS 14322 14467 . - 2 ID=cds.g6638.t1;Parent=g6638.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 13870 14321 . - . ID=g6638.t1.utr3p1;Parent=g6638.t1 #PROT g6638.t1 g6638 MAFNVDYSDVESFKTHFSMEEVSVWFRKKLNRAPEIYDVYSVAKEFYGLGSYERAKLCLELYASMPGALLPGHHLLGYCYLMLSQLGPALQCFKKCVREGYHEDWQLVVELEIEAEEARREAVAPGVGLVAREYEDDPVRAGTEAH* # PASA_UPDATE: g6646.t1, single gene model update, valid-1, status:[pasa:asmbl_6965,status:12], valid-1 NODE_40_length_53883_cov_42.5593 . gene 51726 53830 . - . ID=g6646;Name=g6646.t1 NODE_40_length_53883_cov_42.5593 . mRNA 51726 53830 . - . ID=g6646.t1;Parent=g6646;Name=g6646.t1 NODE_40_length_53883_cov_42.5593 . five_prime_UTR 53740 53830 . - . ID=g6646.t1.utr5p1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 53513 53830 . - . ID=g6646.t1.exon1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 53513 53739 . - 0 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 53019 53324 . - . ID=g6646.t1.exon2;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 53019 53324 . - 1 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 52700 52831 . - . ID=g6646.t1.exon3;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 52700 52831 . - 1 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 52325 52480 . - . ID=g6646.t1.exon4;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 52325 52480 . - 1 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 52082 52217 . - . ID=g6646.t1.exon5;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 52082 52217 . - 1 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . exon 51726 51982 . - . ID=g6646.t1.exon6;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . CDS 51809 51982 . - 0 ID=cds.g6646.t1;Parent=g6646.t1 NODE_40_length_53883_cov_42.5593 . three_prime_UTR 51726 51808 . - . ID=g6646.t1.utr3p1;Parent=g6646.t1 #PROT g6646.t1 g6646 MLSTAEGILGPYVWGRYDMLLLPPSFPYGGMENPMLTFLTPTLLAGDRSLADVVAHEISHSWTGNLVTNKNWEHFWLNEGFTMFAERKIIGRMKGVSMAHFSAISGCKALRDSVEAYGHDSPLTALVPDLKGVDPDDAFSSIPYEKGFNFLFYLETVAGGPEKFEPYLKAHVDRFKFESIVTDEWRAFMIDFFDKHGQPGVFNGVDWDAWFKRPGMPIVENTFDQTLANACTALAKRWLDAKPGEYDGFSAADVAGLSTHQLAVFLEKILLGLGSAGFPREHCVAMEGKYGLTSNNNAEIKFRWQQLCVQAEYEAIYPKVVEFITSQGRMKYVRPLYRSLFVSEKSRKLAVDTFQAHSGMYHNIAATMIAKDLKLA* # ORIGINAL: g6645.t1 original gene structure, not modified by PASA NODE_40_length_53883_cov_42.5593 AUGUSTUS gene 50006 51608 . + . ID=g6645;Name=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS mRNA 50006 51608 . + . ID=g6645.t1;Parent=g6645;Name=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 50006 50423 . + . ID=g6645.t1.exon1;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 50006 50423 . + 0 ID=cds.g6645.t1;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 50542 50693 . + . ID=g6645.t1.exon2;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 50542 50693 . + 2 ID=cds.g6645.t1;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 50822 51048 . + . ID=g6645.t1.exon3;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 50822 51048 . + 0 ID=cds.g6645.t1;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS exon 51209 51608 . + . ID=g6645.t1.exon4;Parent=g6645.t1 NODE_40_length_53883_cov_42.5593 AUGUSTUS CDS 51209 51608 . + 1 ID=cds.g6645.t1;Parent=g6645.t1 #PROT g6645.t1 g6645 MEVPMNHDEARRALALARKALDDGDADKAARLVAKSLRLHDTPQAREFSSRVESAIEQNSDQHRPPPDAHGPTRNEHSHDNKPGTSPEHANSGGEQDQQDGAGRSRLRSLFGKFGGASNADGSKDAGVKRAATKEQLTVVEATIKAETHYEVLGVARTATSAEVKRSYFKLALVLHPDKNPAPEADNAFKILSQAYKTLADDKERAEYDRDLRLGRRPGSRPASAAAQADTPISRRQIPLLILAFLFTLIFFLIDSLIEMPFKPLLYYSKARVAYLRLRGRSPTELWRDSRGRVWLREEDGVVTELTEVVQLAAELEMHWLSSGRRNGHVDPVELFVQAVSNTLLFQESASRGFDFTADDSDDDDISAYRRAPPRPSPAREAGTPRRKAPKPRGRKGF* # PASA_UPDATE: g13707.t1, single gene model update, valid-1, status:[pasa:asmbl_2560,status:12], valid-1 NODE_1766_length_9323_cov_40.7331 . gene 7140 9247 . - . ID=g13707;Name=g13707.t1 NODE_1766_length_9323_cov_40.7331 . mRNA 7140 9247 . - . ID=g13707.t1;Parent=g13707;Name=g13707.t1 NODE_1766_length_9323_cov_40.7331 . five_prime_UTR 9228 9247 . - . ID=g13707.t1.utr5p1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 9016 9247 . - . ID=g13707.t1.exon1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 9016 9227 . - 0 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 8674 8791 . - . ID=g13707.t1.exon2;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 8674 8791 . - 1 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 8170 8240 . - . ID=g13707.t1.exon3;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 8170 8240 . - 0 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 7773 7917 . - . ID=g13707.t1.exon4;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 7773 7917 . - 1 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 7498 7566 . - . ID=g13707.t1.exon5;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 7498 7566 . - 0 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . exon 7140 7237 . - . ID=g13707.t1.exon6;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . CDS 7145 7237 . - 0 ID=cds.g13707.t1;Parent=g13707.t1 NODE_1766_length_9323_cov_40.7331 . three_prime_UTR 7140 7144 . - . ID=g13707.t1.utr3p1;Parent=g13707.t1 #PROT g13707.t1 g13707 MGMLAVFCTNAINILAGINGVEAGQSLVIAVSILVNNAVQLNFDCWKNHLFSMYLIIPFIATTAALLYYNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMILFFIPQVLNFVYSTPQLFHLIPCPRHRMPSYDKRTKVLDVSYAVFNPSELRPIGRAVFAVLKALRLVRVVKASDGNVKVSNMTLINAVLRVTGPTHEERLTAYVLAFQVLCSCFAFFVRYELVKLFYDAVK* # ORIGINAL: g13705.t1 original gene structure, not modified by PASA NODE_1766_length_9323_cov_40.7331 AUGUSTUS gene 708 3563 . - . ID=g13705;Name=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS mRNA 708 3563 . - . ID=g13705.t1;Parent=g13705;Name=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 3482 3563 . - . ID=g13705.t1.exon1;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 3482 3563 . - 0 ID=cds.g13705.t1;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 1892 3279 . - . ID=g13705.t1.exon2;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 1892 3279 . - 2 ID=cds.g13705.t1;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 1651 1728 . - . ID=g13705.t1.exon3;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 1651 1728 . - 0 ID=cds.g13705.t1;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 1228 1336 . - . ID=g13705.t1.exon4;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 1228 1336 . - 0 ID=cds.g13705.t1;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 708 908 . - . ID=g13705.t1.exon5;Parent=g13705.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 708 908 . - 2 ID=cds.g13705.t1;Parent=g13705.t1 #PROT g13705.t1 g13705 MADGDDGSGRDSFFVALGALEADVAQDDEPIAVRVPRSLLGRKRKRHTITATTADSAAARRSLVSIKPHDNEQNGQLCDRKPPLGADSPHIPSHTQRVHHELPHCNNAATAQIDVVTATAAQLHNDGIPSVDGSNIGDAASEAQRRPGGPDSCVSVNSNEAEALPHTHTQLGCGESALALSLTADSQWSRVHGGPDGLRGSQRAESGVTAETLPEFTPIDVHVPSQRPLANSGESACMSREDGGAPDEPRWASLAPLWSVPTAESQPLQHKHNKSTARVHADLHAEVTTDSPSGQHGDAIAGLDACTRTTLTLSGVAIDSVFEAFAASLAWRAVDYEVPCTAKGCIRVLLAGESSDSTGEAAGERGRERHAALVDAAACDARAVTGDKQKYVDAEGDRLLRDPHFAIDALCLYLDVLAADVPMERQPNCPPADTHAHAHVSGHLHSHRRMWLAMARSVVRCGGTFGSAEMSPFECDLRRWTLSSLWQSAKQNAEWVRALHRIAAVGHPVSMATTDITPVVSSDKNWPPLSDLSRFLLRRCAETVKWSHVTPSEASLALSLVIARCTAAYPHIRFTGDVVGCLRCGAKWACAMDLVLAIQDVGGGTLSAIDGLLDVAFHH # ORIGINAL: g13706.t1 original gene structure, not modified by PASA NODE_1766_length_9323_cov_40.7331 AUGUSTUS gene 4277 6336 . + . ID=g13706;Name=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS mRNA 4277 6336 . + . ID=g13706.t1;Parent=g13706;Name=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 4277 4450 . + . ID=g13706.t1.exon1;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 4277 4450 . + 0 ID=cds.g13706.t1;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 4713 4729 . + . ID=g13706.t1.exon2;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 4713 4729 . + 0 ID=cds.g13706.t1;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 5061 5154 . + . ID=g13706.t1.exon3;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 5061 5154 . + 1 ID=cds.g13706.t1;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 5543 5727 . + . ID=g13706.t1.exon4;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 5543 5727 . + 0 ID=cds.g13706.t1;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS exon 6201 6336 . + . ID=g13706.t1.exon5;Parent=g13706.t1 NODE_1766_length_9323_cov_40.7331 AUGUSTUS CDS 6201 6336 . + 1 ID=cds.g13706.t1;Parent=g13706.t1 #PROT g13706.t1 g13706 MALDEDAAELLGGGDVESIRRIGRCEQVVGVLNRLLYSRLYSYYFAVIVLLSILTVIWTAMKPFPGSPGFLLIEIFVNCAMVFEVIVRVVAMGPSLFFSTWSARFDVLVAALSCVALVTYCMNYNNEIGVVDTKEEVMILAVLSVAQITRLGIMIINQHRRRMVASRVVTFDRFRRSRSTDGIELGSSQMALTSTYETDDD* # ORIGINAL: g6825.t1 original gene structure, not modified by PASA NODE_1837_length_8981_cov_40.0619 AUGUSTUS gene 7239 8628 . + . ID=g6825;Name=g6825.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS mRNA 7239 8628 . + . ID=g6825.t1;Parent=g6825;Name=g6825.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 7239 8090 . + . ID=g6825.t1.exon1;Parent=g6825.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 7239 8090 . + 0 ID=cds.g6825.t1;Parent=g6825.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 8381 8628 . + . ID=g6825.t1.exon2;Parent=g6825.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 8381 8628 . + 0 ID=cds.g6825.t1;Parent=g6825.t1 #PROT g6825.t1 g6825 MTRLGRALSASRASQSPLTLLRTGRPGRPLGHYAQMGRVMEWGQHEGKGAMWSGRASVRTFGCTPSVRGVHPIHRGAPNLTHPAAVYSNSPQPERDYLQMVLNARVYDVAHETPLTYAHDLSLRSGNNVYIKREDLQPVFSFKLRGAYNKIASLSDAEKAGGIITCSAGNHAQGVALSAARLGIDAVIVMPVATPTIKVDAVRKFGGKVRVLLHGNNYDEAAAEAQRLAKVDGRIVVHPFDDPHVIAGQGTIGMEILKQTNGKPLDAIFACVGGGGLIAGVASYVKRVRPGVKIYGVEAEDAAAMTLSLQRGERVKLDHVGLFADGAAVKLVGQETFRVCQGLVDGMVTVTTDEICAAIKDAFVAT # ORIGINAL: g6823.t1 original gene structure, not modified by PASA NODE_1837_length_8981_cov_40.0619 AUGUSTUS gene 109 3028 . + . ID=g6823;Name=g6823.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS mRNA 109 3028 . + . ID=g6823.t1;Parent=g6823;Name=g6823.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 109 3028 . + . ID=g6823.t1.exon1;Parent=g6823.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 109 3028 . + 1 ID=cds.g6823.t1;Parent=g6823.t1 #PROT g6823.t1 g6823 SSSGASPPPKKRSSHPESNLRHTSRLPSEWADDPILGVLTGDESPAAENVRADTISESGHKRDQKPPKEANRDAHGSAVDDENGLGDYDIDEYGNRVHIISFSGDARDSRVREFGAPQRVCAAWTGDGSGPSRDTLHVVLCGAAPDGWEFTLCSVAMSDIVSDDISEHDEARGAVRVHAKSTLLNATDGMQPGTPSVHPRVIALQVRSDDGTRGGSGRASGCAALGGVQSVAVSLFAAFFGGNHALSSLSLPCPRGIVAACTDGRVFALSLDTDASGASIPRVGGDGWVCVAGASDSPVGFGCVRLSPLGQKLRSDHLNSGPAENSTDANLCDALVCVASSGRVDVIRAADVPIGERNERSAGLRALVVGRLELLSFHVGCHVSSAHMLPSTGDVILVSNSNIHAVQLPFLDPKSPARASTPVLRCRALVSSGSTVAIAVDSSPVSHSATQFRLHSIDAYGHVNLLVADAAPARDADTSAADTGASSGAVDVPGLLSDIRHTSSEHAEIEAESASLDAILGFLNVVAHVATVREAAVAGPDAKAGDANLLASRASSGAFSLSAAMAGESGRVRGVRGVRGGGGGLSATGVLLRASLTNNTGRPLPAGLAIFSRVQAREIGTSDTPRQGHPVSRERRPGGAPDALPSACSAINALPQLDHGESFHFDVAVGDWPGSSLSGFTVGVAVTLQLPPGLQWAEHDCPSRGSDTTDVRLVDVWSGSATLDSVDMLRVRVTCASSGPASHIGRMPNAVPANAPHSGRAVVREGIAQPMLVLPAAPQIRQFSLPFPVHALGSFAETLHSILAPHRAISSVSEQIVVDLCSADDETNVRFTASVRASFSAPNDEIDRAIAHPPPVGILTCECDNPALTCQLRADIVCRMTQLNLMEAKRSKGANALKGRPGSTHALRLLRRQLVSGTASPAESTTSVGGVDILGNDGDRSSFTRRAANAIDVYRRLRALGDRDGAPAHAKG* # ORIGINAL: g6824.t1 original gene structure, not modified by PASA NODE_1837_length_8981_cov_40.0619 AUGUSTUS gene 4131 6438 . - . ID=g6824;Name=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS mRNA 4131 6438 . - . ID=g6824.t1;Parent=g6824;Name=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 6385 6438 . - . ID=g6824.t1.exon1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 6385 6438 . - 0 ID=cds.g6824.t1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 5999 6133 . - . ID=g6824.t1.exon2;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 5999 6133 . - 0 ID=cds.g6824.t1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 5469 5570 . - . ID=g6824.t1.exon3;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 5469 5570 . - 0 ID=cds.g6824.t1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 5160 5306 . - . ID=g6824.t1.exon4;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 5160 5306 . - 0 ID=cds.g6824.t1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 4935 5043 . - . ID=g6824.t1.exon5;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 4935 5043 . - 0 ID=cds.g6824.t1;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS exon 4131 4696 . - . ID=g6824.t1.exon6;Parent=g6824.t1 NODE_1837_length_8981_cov_40.0619 AUGUSTUS CDS 4131 4696 . - 2 ID=cds.g6824.t1;Parent=g6824.t1 #PROT g6824.t1 g6824 MSSSSSDSDESEASRRSEAPLRSPDGLYHPLTLRRNSLPLAIDLSGVDGDRALARRFSSGSSNEDSPKEAVIREVRHEKGVTSTYQLSRSWEEGLHLESQPFRQTRDRLSWEEKLSVHSSPCPSPSPAPPPAHIPPSSVVSVRSGRTSESGSPVLSPLPSPCLVPPSPFPQLTRTHPTLKRKLSDERFESHYGSPPKRPNTRPFRSSSLGIQSAPPILNGLQSPPSSVDSLGSPHSAVRGSASSMPQGLGMPSTPSLRARESPTGSDKVFGAKHGTAERRLDLFDGMDVTEGENGNGQEHERGEGVDRGRMYPDDYLRGNSGTADSDDMNTGSAIESGESNNDDGESGGPVSMDTQQEDAPSVLVSAGPM* # PASA_UPDATE: g973.t1, single gene model update, valid-1, status:[pasa:asmbl_991,status:12], valid-1 NODE_125_length_37231_cov_40.9324 . gene 385 2314 . + . ID=g973;Name=g973.t1 NODE_125_length_37231_cov_40.9324 . mRNA 385 2314 . + . ID=g973.t1;Parent=g973;Name=g973.t1 NODE_125_length_37231_cov_40.9324 . five_prime_UTR 385 385 . + . ID=g973.t1.utr5p1;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . exon 385 523 . + . ID=g973.t1.exon1;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . CDS 386 523 . + 0 ID=cds.g973.t1;Parent=g973.t1;5_prime_partial=true NODE_125_length_37231_cov_40.9324 . exon 953 1229 . + . ID=g973.t1.exon2;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . CDS 953 1229 . + 0 ID=cds.g973.t1;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . exon 1618 2314 . + . ID=g973.t1.exon3;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . CDS 1618 1994 . + 2 ID=cds.g973.t1;Parent=g973.t1 NODE_125_length_37231_cov_40.9324 . three_prime_UTR 1995 2314 . + . ID=g973.t1.utr3p1;Parent=g973.t1 #PROT g973.t1 g973 GFCFFNNVAVAASVAIKSLGVQRVLIVDWDVHHGNGTQNIFYDNPNVLYVSLHRFDNEDFYPSTGRLDECGKGNGLGFNVNIPWKGGELPMGNTEYLSAFHHVIMPIATEFKPDIVLVSAGFDAADGDVIGGYKVTPEGFARMTGLLKTLANGRLVLALEGGYDLPSLSSSATACLQVLLGDKEPFLPSSVGSTIQERKPEVPLSCAVSTLRQVIQTQQKHWKSLKMPASFEIPSESFGGGGSKGREARPNMKRAAPVRYKDL* # ORIGINAL: g977.t1 original gene structure, not modified by PASA NODE_125_length_37231_cov_40.9324 AUGUSTUS gene 20402 23530 . - . ID=g977;Name=g977.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS mRNA 20402 23530 . - . ID=g977.t1;Parent=g977;Name=g977.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 20402 23530 . - . ID=g977.t1.exon1;Parent=g977.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 20402 23530 . - 0 ID=cds.g977.t1;Parent=g977.t1 #PROT g977.t1 g977 MTSSSPTTAGTCAAWPPPNLADPLDMERRMELARNARAAAVAEAYGADAGSSWPWAELAGHINKGSQAKTRECFLKALEGDVPLPALIRLIVADPLRFHKDAHGKLRRDETGPRARISAASDLVLQAAGRFHHEVDFDILRHMKLTYGVDGIPVGMVHQSAAYDGGLWGVMACALSVIYSQPYSRFPQFVEGVLRRYGAGDPMHCIPFAWYASVGCSSSFIEYVLDAVPAAPDADGHPATRITPSLVPRMLRGLRVLANSITRMAMMPKSTGSDNNARTLELVSGRRLVTCRIVREVALRVGGTPCLHTDPDVAPLVFTLVHACIEACNAAIALCSPHDFPSDDPLLAALRTAAEDLLRLSEQMYPDQTVRTARLLEATKQRESALSSLKRGTAAVIVCGPGNSCNELALRILLKERFSQLAPVSDDLVGMSVMMTVCTFILDHHHMAVAPQLPALPEWLVTPYFFSDDPLDPYDLCGMSVYVVMLIGQGMPWVSLCASWFADDNGNHLPLSHTAGEMLKFGCSLILGSYKDIPLRAPIMTFARERIAATPSTVSKGARDVEAKIAASLARFAALDTRGSFLAAVSGVAKARAALGFRYSNPGPHGLLNVPTTSSLLPYPTATGADAICAEAKRVCWSPLIIAYTSQMAGMAEYGKFSDTKGKPEISEHRWNNAMSLYMHLLRLPSPIDMVGKIAAASVYDAVHVLLVGQGSQYLRGFLLLSALSLARAPAALDVIAAGSTRMLRRENVFTRIMFAHMSFGRFLFGAAVVATGIINVELVRSMFSTQFFATFFAMDSEFAVVLSENSSSIVEWVAVFADVYERTLPLVVDRAKEVALRISVIYSLTQAIGLECGAAAKKSAANRSAARHIVSMWAATVRQYYTLFVTSLVPRDANVAKTKEYIAIANSAIVAAGIVSQEELDVMCKPTPSSIPYYYRMDSTDFLSCARCRVPGTNALSMRMRVCGGCRATYYCDEACQRAHWATHRPDCKLIAATASDHDLSGRPLTLMTRFALFSSFMAGVSLDENPTSIATNALGRFSTC* # ORIGINAL: g980.t1 original gene structure, not modified by PASA NODE_125_length_37231_cov_40.9324 AUGUSTUS gene 32393 36940 . - . ID=g980;Name=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS mRNA 32393 36940 . - . ID=g980.t1;Parent=g980;Name=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 36821 36940 . - . ID=g980.t1.exon1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 36821 36940 . - 0 ID=cds.g980.t1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 36290 36597 . - . ID=g980.t1.exon2;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 36290 36597 . - 0 ID=cds.g980.t1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 35507 36000 . - . ID=g980.t1.exon3;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 35507 36000 . - 1 ID=cds.g980.t1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 33607 35336 . - . ID=g980.t1.exon4;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 33607 35336 . - 2 ID=cds.g980.t1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 33327 33476 . - . ID=g980.t1.exon5;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 33327 33476 . - 0 ID=cds.g980.t1;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 32393 33148 . - . ID=g980.t1.exon6;Parent=g980.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 32393 33148 . - 0 ID=cds.g980.t1;Parent=g980.t1 #PROT g980.t1 g980 MGIRSVAVVLMHSYTFREHENLVGRIALELGFDHVSLSSQVVPMVKMVARGFTACADAYLTPCIRRYLDGFQAGFDAGIRTTPVLFMQSDGGLSRAEGFSGARAIISGPAGGVVGYGVTTFANDQSKPVIGFDMGGTSTDVSRYAGSYEHVFETTIAGVTIQAPQLDVNTVAAGGGSRLFFRSGMFVVGPESASAHPGPACYRKGGPLTVTDANLMLGRLLPEHFPHIFGPNENEPLDAEASKRGFEALTTEVNLFLAASGQRMTPEEVALGFVEVANEAMCRPIRALTQAKGYDTSHHTLACFGGAGGQHACAIARALGMRSVFVHKYSGILSAYGLAMADVVHEAQAPAATSLSPDTIVQLRAQIDALSAQCIAALEGQGFARDRIVLEPFLNLRYDRTDCAIMTPPTAADANAMALNPIADYELSFLEHYKREFGFTIPGRTIVVDDVRVRGIGKSAIDAEPHPEATRAPAVPFASARCCFKGGWRDTGLHRWRDLHPGQSIPGPAIVIEANSTVLVEPGCVASITRTGDVAIAVSTEGPTGADAAAAAADSGRAVDAGEARVDAVMLSIFGHRFMSIAEQMGRALQRTSISTNIKERLDFSCALFGPDGGLVANAPHIPVHLGAMQEAVRFQITHLKGDLHDGDVLVSNHPAAGGSHLPDITVITPVFHAGVDAPVFFVASRGHHADIGGLTPGSMPPQSTSLAEEGACIVSFKLVRGGEFQEEGIRRLLEAPGANPGCSGSRNVSDNLSDLKAQVAANQRGIALVAELIAENSLGTVHAYMRHIRSNAERAVRDMLMSVARDRLARGTSCTLRARDRMDDGTPIALTVTIDAETGSAVFDFTGTGPQVYGNCNAPRAVAYSAVIYCLRCMVGHDIPLNQGCLEPVRIVIPDGTILSPSPDAAVVGGNVLTSQRVVDVVLRAFEACAASQGCMNNLTFGDASLGYYETIAGGAGAGPTWDGRSGVHTHMTNTRITDPEILERRYPVLLRQFSLRAHSGGRGTHPGGDGVVREIEFCRPMTASILSERRSFRPYGLLGGHGGHRGCNLLHRHATGLTINLGAKCSVHLLPGDVLRILTPGGGGYGPPEDDADWDSDGWGEGDAQLVERDTQHRRGHSHDGRRPRSPAGGDAGGDDVRPKRRRRTTNGPLSAVFGASAESAASSGDIEAKGSLGNYRMMQESA* # ORIGINAL: g975.t1 original gene structure, not modified by PASA NODE_125_length_37231_cov_40.9324 AUGUSTUS gene 6054 15055 . + . ID=g975;Name=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS mRNA 6054 15055 . + . ID=g975.t1;Parent=g975;Name=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 6054 6467 . + . ID=g975.t1.exon1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 6054 6467 . + 0 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 6822 6918 . + . ID=g975.t1.exon2;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 6822 6918 . + 0 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 7667 7892 . + . ID=g975.t1.exon3;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 7667 7892 . + 2 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 8054 10249 . + . ID=g975.t1.exon4;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 8054 10249 . + 1 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 10441 10561 . + . ID=g975.t1.exon5;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 10441 10561 . + 1 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 10873 11859 . + . ID=g975.t1.exon6;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 10873 11859 . + 0 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 12049 12616 . + . ID=g975.t1.exon7;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 12049 12616 . + 0 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 12882 13717 . + . ID=g975.t1.exon8;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 12882 13717 . + 2 ID=cds.g975.t1;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 13940 15055 . + . ID=g975.t1.exon9;Parent=g975.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 13940 15055 . + 0 ID=cds.g975.t1;Parent=g975.t1 #PROT g975.t1 g975 MPSNVPTPRTSIGGAFAEDGGGVGETSAVRKGTGLARLLIRTRDPSSALSPRIDGPNGAGSTSPSFVRKTPSVLSTGGGSLTASSDRASGRGMSRHGSVFSLFSGKSVLSGAHSSGGVSVLNKTADDNEVIIRSYVPTAVVKRHTETGDIPLTVPSREVVEVCGFIVDIHAILNRFFGSMISIIQNFRGDIYKFAGDALLVVWPMHETDEGKTDRVARVILCALTIQKRLHNWSAGHGIKLSIRIGVGTGKIVNFHVGIVEQRMEFVSTGEAITDMKIAEGLAPPGHVVASPDTFRCVKHILRSNREVSVHPLAREDYVDISALLEASIQSSLSAENIAAAALGGPHSRPSQPPTPSHASGRVSMSGPPPSMAALQRQQTEQALIEAERKRKESKTSMTSTGSASAAAAALDNLAVLKEEDNIASPAVIRGFSKRTVSVSSANGPQGLGTSIGSSQHVSLASPSTASASVATAATDVSFKSVPSTPLLRDDAIPLPNSVVDISGKDGDNTSIGSGSQQYWEIVRTRMITEGPRQRAPSQPSSHPGGRHAPSRQISRGSAAMSDELVIDEGPSGSQLALSSAGAGHVLGNPHHAMLRRTGSSGSQILNRTGSNASLSNSTSFEGAAPGGAGGRRLPRKLSLFKLGNGISSSADVSSASAEFGWESNGSMEDVMTAPVSAAAVEHSAPKAPAQRITTKSLRSISHRLSLVGGRPPPLKISPSSHSLYESAISLDTPGIVEKDIVSNVKDWDKIDPTGLLLRVFAADEDDDKDDAVEKASGRKMRSRAQSFIQSAKKAFTPRRSSVVPAPPRSSVIIEQRRSSANHGSQRASLHSTVGSHHNDTSSLAESASPTDTAANSPTASHVSLAMAGEGHEPPKGLVEFQRPRLTRGNSRAGSGLILNLPPPSAKKDGKWSITDALQKRMDKRRHSKASSNSSRSGHAVRVSANALLLAYLPDSLVKFIKEGSGQEWLSEVRPVTILFINVNEDCAQDNAELESLIQDAFECVQAQAERFDGSLNKVFMFDKGLCFVVGFGMAHHNHEDAASRGMRAAMAIRDALASRGIGTSIGVTSGRVFSGVYGSAARREYTVIGDAVNLSARLMEAAKVTEARILCDVKVKQKLKGVRVEALTPIFVKGKSEALEVFQPVLSTTTTTVGTHHERSMSVAGHTQTASERRGSVPGVSIASGGSGRSNGNTSEAAPLVGRTMEIASFDQFLNYMQTDIMGHVIILRAETGMGKSRMATHYRWRAVSRGVSVVFAVADQNEQSTPLFMVRQLIQGMLMMADLQSHDGDGPAAAPHQDMTNDAMCSRIRNWLSLEPEMFEYLSLLNGLVAAEFPETDAAKKIKGQARADKVRRLLLTMLLSGLSASPTVLVVEDAHWIDSMSLGLLASFIAAQPPVVVVITSRQMKSADQMQQDWVTIDNHPCTVSYDLQPFTESQTRELICLVLSVDHVPDAFVRLVHSRAQGNPLFTEELVFSARDQGVLDFGGPNGRDLVIAEGTDISTVRFPESVQDVIVSRINNLPPSDLLMLKAAAVIGRVFTLRMLLDVYPDVSDPRDIVQRLHELERLDIIYRDSSAAGDAPGNASNSANMLSSRSSVFLTSAQDAAMVPLSELNAAYVFRHVLTLETVYNSLLHSQKTTLHRRVATHIEQATTPGDMENVAPMLAHHWLRAGEPTRAFSYFVQSGEYAVRTHAYQEAFHFLTQARNLLLAEHAIQRDQVQCANATFLLGVTCLELHYYTKAVAFLQDCLSQLGHRQPTRGFGMAVVALRHWFSTAVDSWGVFGGKNKVLSADDDRRCREMATMLYSLLLIYMHQHRNNPRLEYAMVSMMMLDITRPIEKLSERAVAYSNAAVAASAFGRRRQFDNYRHRVVTHPSAQDPSIHVALAHFNCGNASMRFSQWKYAVEHFDTSMAMYGDLCESPMAQEANFNLACVRLFTGRHYVATQMIEGLIQLAREGEDLFVLPAYYCMLFTAQLQEQTVPSAYDGLIGPMCDICDELSVLQAVEEQSDAGTMHLFHMHAILAVFYARAGDFASAAETLANALPGVDAIRADNFTRFFGLFAVVEVLVMFMTRAGRTALANGGLSPLFASHSELLAATRKALVTLDAFSRVYTFARPRARHMRGLYHYLRGKTGKGERSIRKAVALARKLEMEQEAAWAESHLKWIVVGPPATGQPPVGFMVLGT* # PASA_UPDATE: g978.t1, single gene model update, valid-1, status:[pasa:asmbl_989,status:12],[pasa:asmbl_990,status:12], valid-1 NODE_125_length_37231_cov_40.9324 . gene 23935 28896 . - . ID=g978;Name=g978.t1 NODE_125_length_37231_cov_40.9324 . mRNA 23935 28896 . - . ID=g978.t1;Parent=g978;Name=g978.t1 NODE_125_length_37231_cov_40.9324 . five_prime_UTR 28692 28896 . - . ID=g978.t1.utr5p1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 27659 28896 . - . ID=g978.t1.exon1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 27659 28691 . - 0 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 27378 27497 . - . ID=g978.t1.exon2;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 27378 27497 . - 2 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 26893 27166 . - . ID=g978.t1.exon3;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 26893 27166 . - 2 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 26505 26690 . - . ID=g978.t1.exon4;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 26505 26690 . - 1 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 25778 25916 . - . ID=g978.t1.exon5;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 25778 25916 . - 1 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 25375 25491 . - . ID=g978.t1.exon6;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 25375 25491 . - 0 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 24894 25050 . - . ID=g978.t1.exon7;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 24894 25050 . - 0 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 24436 24659 . - . ID=g978.t1.exon8;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 24436 24659 . - 2 ID=cds.g978.t1;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . exon 23935 24081 . - . ID=g978.t1.exon9;Parent=g978.t1 NODE_125_length_37231_cov_40.9324 . CDS 23935 24081 . - 0 ID=cds.g978.t1;Parent=g978.t1 #PROT g978.t1 g978 MSGSGRGAPVRTPSVKTLDPLLSIVAKGILSASGSGSGSGSGSNSPGGAFGGFAHEEPASSKASPAVVVGGLPESSLARRKGTWTSASTIPSPTAHAHAHATNASMSMGGSGGGAVGNGVEDSDRLPPATATATAAADNAPPTPLSLSSRTSSSTLTPLATPPKPAYATVAATISGGASSQKKSRVAHSAGAVPVRSRDGGVTDRPADAASPSSSLRSDGTESLLAATLERLRLSDRKPSVESVSSVVTDNDTLASIPTFVDRSSGAVSSSVPPASLSGVGRKIDALDRTAAEPVWRAARIRHVDGRVADDGGGTAAAGGDSASVDSREECDVPATFVHFEGTGAEYDRWIPLTDTRDRTDASLVGPGGYDDDDKWQKAARRAAESPRSRTGVVYDSRMLLHCCTCPVPRLTHPEVPQRISAILAEMERTNACLDRCRPVPASEVTREAVETCHDPLHVTTYGFARPNQRPPGLKPMECGGVGLAVDTVYNHAHSPLAARLSAGSLVRLCEEVASGRLANGFAVVRPPGHHAEESDAMGFCFFNNVAVAAKRALQMPGIARVLIVDWDVHHGNGTQNIFYDNPNVLYVSLHRHDNGDFYPGTGDADECGSGNGLGFNVNIPWKGRIPMGNTEYLSAFHHVIMPIATEFKPDIVLVSAGFDAADGDEISGYKVTPEAYAHMTRLLMSLASGRVILALEGGYDLESLSASATACLSALLGDQLSLLPRSCVTSTQERAPAVPVTPAVNVLRKVIGIQQKYWRSLQMPRSLEIASDLFRKSALVTGRRVLSAPANQLVSRK* # ORIGINAL: g974.t1 original gene structure, not modified by PASA NODE_125_length_37231_cov_40.9324 AUGUSTUS gene 2660 4742 . - . ID=g974;Name=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS mRNA 2660 4742 . - . ID=g974.t1;Parent=g974;Name=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 4544 4742 . - . ID=g974.t1.exon1;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 4544 4742 . - 0 ID=cds.g974.t1;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 4204 4419 . - . ID=g974.t1.exon2;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 4204 4419 . - 2 ID=cds.g974.t1;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 3798 4077 . - . ID=g974.t1.exon3;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 3798 4077 . - 2 ID=cds.g974.t1;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 3314 3462 . - . ID=g974.t1.exon4;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 3314 3462 . - 1 ID=cds.g974.t1;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS exon 2660 2985 . - . ID=g974.t1.exon5;Parent=g974.t1 NODE_125_length_37231_cov_40.9324 AUGUSTUS CDS 2660 2985 . - 2 ID=cds.g974.t1;Parent=g974.t1 #PROT g974.t1 g974 MFSSTASTVGRAVRINMAAAHVTPAVCSARSAAPVVRKVSSAAVPATTRKIRVKQLSTNFREATEIVNEPVSVGPKDLLVSTAHMGINASDINFTAGRYNPGVPPPFDAGFEGTGHIVAVGSEVKHFKVGDAVGYMTNGAFAEYIAIPAARAVPLPSVNPEYISLMVSGLTASIALEKVGEIQKNNTVLVTAAAGGTGQFAVQIAKLAGCHVIGTCSSDEKASFLKGLGVDRAINYKKEDLNKVLKTEYPNGIDVVYESVGGDTFEVCVNRLAPLGRIIVIGFITGYNNDQGFTSVQTGTLLPKLLTKSASVRGFFLFNYANAWKEHTIRLLKLHGEGKIKATIDPRSARGDFVGLDAVAPAVEYLHSGKSFGKVVVNMPSAAKTKSSL* # PASA_UPDATE: g979.t1, single gene model update, valid-1, status:[pasa:asmbl_993,status:3], valid-1 NODE_125_length_37231_cov_40.9324 . gene 29364 32260 . + . ID=g979;Name=g979.t1 NODE_125_length_37231_cov_40.9324 . mRNA 29364 32260 . + . ID=g979.t1;Parent=g979;Name=g979.t1 NODE_125_length_37231_cov_40.9324 . five_prime_UTR 29364 29698 . + . ID=g979.t1.utr5p1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 29364 29747 . + . ID=g979.t1.exon1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 29699 29747 . + 0 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 29941 30001 . + . ID=g979.t1.exon2;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 29941 30001 . + 2 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 30188 30242 . + . ID=g979.t1.exon3;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 30188 30242 . + 1 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 30482 30574 . + . ID=g979.t1.exon4;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 30482 30574 . + 0 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 30907 30990 . + . ID=g979.t1.exon5;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 30907 30990 . + 0 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 31293 31418 . + . ID=g979.t1.exon6;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 31293 31418 . + 0 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 31635 31660 . + . ID=g979.t1.exon7;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 31635 31660 . + 0 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . exon 31820 32260 . + . ID=g979.t1.exon8;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . CDS 31820 31865 . + 1 ID=cds.g979.t1;Parent=g979.t1 NODE_125_length_37231_cov_40.9324 . three_prime_UTR 31866 32260 . + . ID=g979.t1.utr3p1;Parent=g979.t1 #PROT g979.t1 g979 MGILMTKFMQLFWSQEEYKVIITGLDNAGKTTILYQLLMNEVVVTSPTIGSNVEEVQYKNIHFVMWDIGGQESLRSSWATYYANTRCVILVIDSTDRERLSISKEELYRMLAHEDLRKACLLVYANKQDVKGSMSAAEISSLLNLTSIKEHGWHIQACCALTGEGLYQGLDWVASQVGK* # PASA_UPDATE: g976.t1, single gene model update, valid-1, status:[pasa:asmbl_992,status:3], valid-1 NODE_125_length_37231_cov_40.9324 . gene 15784 19629 . + . ID=g976;Name=g976.t1 NODE_125_length_37231_cov_40.9324 . mRNA 15784 19629 . + . ID=g976.t1;Parent=g976;Name=g976.t1 NODE_125_length_37231_cov_40.9324 . five_prime_UTR 15784 15987 . + . ID=g976.t1.utr5p1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 15784 16124 . + . ID=g976.t1.exon1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 15988 16124 . + 0 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 16540 16615 . + . ID=g976.t1.exon2;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 16540 16615 . + 1 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 16935 17041 . + . ID=g976.t1.exon3;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 16935 17041 . + 0 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 17438 17570 . + . ID=g976.t1.exon4;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 17438 17570 . + 1 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 18023 18154 . + . ID=g976.t1.exon5;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 18023 18154 . + 0 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 18471 18584 . + . ID=g976.t1.exon6;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 18471 18584 . + 0 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 19075 19198 . + . ID=g976.t1.exon7;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 19075 19198 . + 0 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . exon 19472 19629 . + . ID=g976.t1.exon8;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . CDS 19472 19488 . + 2 ID=cds.g976.t1;Parent=g976.t1 NODE_125_length_37231_cov_40.9324 . three_prime_UTR 19489 19629 . + . ID=g976.t1.utr3p1;Parent=g976.t1 #PROT g976.t1 g976 MASNSWFATGGGAGASDPASSLGEMSVHIPLDDDEGDIQRRQNSSGKSNAVMDAALGSLVGEGIGGQIAGNVLNMGKESAQRMYSSYARIDILRPYFAVELPELRSRLIRSFIPRKGAADPVPAELYGPLMLAFTLVTVLLFGMKAYGMRVQQGTLMGTSMAVTFGYWFGASMLFYVASFVFNTSISIVQSLSVTGYGLFGYCIALAMGTLSSDTRLFYLGWALFGGLASARMASVYAAHTADRKQGLIVGGVVWFVHWTYLLYIRLSYHSIYEAIANL* # PASA_UPDATE: g10874.t1, single gene model update, valid-1, status:[pasa:asmbl_1269,status:12],[pasa:asmbl_1270,status:12], valid-1 NODE_1344_length_11881_cov_35.6188 . gene 116 6355 . - . ID=g10874;Name=g10874.t1 NODE_1344_length_11881_cov_35.6188 . mRNA 116 6355 . - . ID=g10874.t1;Parent=g10874;Name=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 6227 6355 . - . ID=g10874.t1.exon1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 6227 6355 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 5821 5945 . - . ID=g10874.t1.exon2;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 5821 5945 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 5388 5573 . - . ID=g10874.t1.exon3;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 5388 5573 . - 1 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 4731 4839 . - . ID=g10874.t1.exon4;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 4731 4839 . - 1 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 4189 4323 . - . ID=g10874.t1.exon5;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 4189 4323 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 3933 4045 . - . ID=g10874.t1.exon6;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 3933 4045 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 3648 3698 . - . ID=g10874.t1.exon7;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 3648 3698 . - 1 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 3121 3237 . - . ID=g10874.t1.exon8;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 3121 3237 . - 1 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 2851 2951 . - . ID=g10874.t1.exon9;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 2851 2951 . - 1 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 2576 2721 . - . ID=g10874.t1.exon10;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 2576 2721 . - 2 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 2152 2263 . - . ID=g10874.t1.exon11;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 2152 2263 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 1621 1724 . - . ID=g10874.t1.exon12;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 1621 1724 . - 2 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 1236 1316 . - . ID=g10874.t1.exon13;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 1236 1316 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 920 1126 . - . ID=g10874.t1.exon14;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 920 1126 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 550 735 . - . ID=g10874.t1.exon15;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 550 735 . - 0 ID=cds.g10874.t1;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . exon 116 320 . - . ID=g10874.t1.exon16;Parent=g10874.t1 NODE_1344_length_11881_cov_35.6188 . CDS 116 320 . - 0 ID=cds.g10874.t1;Parent=g10874.t1;3_prime_partial=true #PROT g10874.t1 g10874 MSKKAGGGGKKPNDAVAADVLQAIILADSFNERFMPITLEEPRSLLPLANTPLLDYTIEFLAASGVQEIYVFMCAHAKKIDAHLEKIRQKLCYAPITIESIISQQCLSVGDALREIDQKQLIQSDFILVSGDLVSNMNLQHVLKAHRARQDKDKGTIMTMVLKQADPGHRTRSLEEDTVIAVGESQRLLSYQRGEEEARIPLEVFENASEVQVRYDLLDTHICVCSVQVPFLFTDNFDYQDMRDFVRGILENEEILGNKIHVHLIGNEYAARVNNLRSYDAISKDITHRWTFPMVPDTNFGDAHYNYGRHNIYLDSDVILARSSVLKEDVIIGHGSRIGENTRIAQSIIGKNCIIGAGVTIEGSYLWDGVVVEDGSKIIKSILCHRTRVKHHVTVNCGSILSYDVVVGPNFEVPPHTKLTVSRRTYDDTFDDGHSSGTDSPGAAPRRKSSADGQIKVADIQRLTKLANASIPSTAEEEDEEGLNGSGTDSHKSEDEGESATAERALRAVAEQLEAEIEIETQRNNTLSKQIMTCKRDEERAIKVQLKESDAKIESLKKRITKLGVAVPVKDERTVEKHQADIERLTDIISKHPLATLGVPNMAHRAFQSARAFFFLKASHWNFEHAEKKLIEHLQWREKHRPDAQTEVAMAAELQSRKFYAYKGDKYGNRCVIFKMNRHVADGDHQRTLRHWLWLGDHVISR # PASA_UPDATE: g10875.t1, single gene model update, valid-1, status:[pasa:asmbl_1271,status:12],[pasa:asmbl_1272,status:12], valid-1 NODE_1344_length_11881_cov_35.6188 . gene 7182 11599 . + . ID=g10875;Name=g10875.t1 NODE_1344_length_11881_cov_35.6188 . mRNA 7182 11599 . + . ID=g10875.t1;Parent=g10875;Name=g10875.t1 NODE_1344_length_11881_cov_35.6188 . five_prime_UTR 7182 7206 . + . ID=g10875.t1.utr5p1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 7182 7318 . + . ID=g10875.t1.exon1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 7207 7318 . + 0 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 7702 8067 . + . ID=g10875.t1.exon2;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 7702 8067 . + 2 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 8215 9764 . + . ID=g10875.t1.exon3;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 8215 9764 . + 2 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 9945 10019 . + . ID=g10875.t1.exon4;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 9945 10019 . + 0 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 10304 10429 . + . ID=g10875.t1.exon5;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 10304 10429 . + 0 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 10552 10781 . + . ID=g10875.t1.exon6;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 10552 10781 . + 0 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 11014 11133 . + . ID=g10875.t1.exon7;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 11014 11133 . + 1 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . exon 11485 11599 . + . ID=g10875.t1.exon8;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . CDS 11485 11596 . + 1 ID=cds.g10875.t1;Parent=g10875.t1 NODE_1344_length_11881_cov_35.6188 . three_prime_UTR 11597 11599 . + . ID=g10875.t1.utr3p1;Parent=g10875.t1 #PROT g10875.t1 g10875 MAALLHSRAAAIGGSRHRSVMHALEGPDESESHGEHQAVIAALEALLDKTRRMHLQGQSANNSLMHASSTVAALEQELADYRLLTETSQSPTKASALPQSPTKAGARSQPPPLLGSNRRMEVAALEASPQGRWVPLVDSSVCNAGDSSYVTSDANKRKQELDALFRRMDAGICELSEMIPLPKTVIGVSGVGAKQQQPSRIRRTRDTSPIADAASPDEQSPVLVQPRTGNSDAHSVDPSPRHSGRQRDKMHDRASSRPEPHTSTAGKSSPRKREQRETEREQRTIRSRRNLMKPTEKLSNSAARVSDSRDDAGRNTHSRHPDSANMLHQRQAEHAGHTAVSTAVGMREEDSRAVRNYKDADVRDDRAGGRQRDGSDHNVDGEWAVLRRGREGRSGSLDDDGPAVNEKHADTTREEHVARDNRREKRSRERRPARHTHRRHFEEADRDLGNGVTASGDADPFVPLVSDQRGVRPHRRTSGSDNTPDHVSTDQDEDDEGDATAAVAGLPARRDALGAGRPDDGTVTDSWKTATAGRRVGGQSTRHAVAAGTGVKGAKRVRVEDGAGHYGDGLARSSDGSDSEHEKFGRPIETGIREDSAQPWSKKKHPDVRIPEDKQAMSGYNDDDGNDSEEGSSAGNGGRATGLASVGDMIGARIASVFGALREKSTKLEGMCVTAEDRIRQLETEVESERAVRLLKEADLQTLYIRSRRRGVVLAVHSVKTATGAVSRHQPDRQRIAKYKGDEQQHAHAVVRPPRPAQCGSRNNPPASASKVKSLLRAHLSAGCRACLHAGVNPIRGIDSPAELAAVIKCLETDMEQAAVKFQKLSADAERRARAGLGVDTIHVTVQLRRMVDQMDDRGRQVAMLRDYARRIAARSAWLAKGTHKPSPAAPSKHTA* # ORIGINAL: g12253.t1 original gene structure, not modified by PASA NODE_545_length_21483_cov_41.7351 AUGUSTUS gene 235 5579 . + . ID=g12253;Name=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS mRNA 235 5579 . + . ID=g12253.t1;Parent=g12253;Name=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 235 1814 . + . ID=g12253.t1.exon1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 235 1814 . + 0 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 2156 2260 . + . ID=g12253.t1.exon2;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 2156 2260 . + 1 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 2551 2628 . + . ID=g12253.t1.exon3;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 2551 2628 . + 1 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 2834 3475 . + . ID=g12253.t1.exon4;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 2834 3475 . + 1 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 3710 4520 . + . ID=g12253.t1.exon5;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 3710 4520 . + 1 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 4743 5227 . + . ID=g12253.t1.exon6;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 4743 5227 . + 0 ID=cds.g12253.t1;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 5468 5579 . + . ID=g12253.t1.exon7;Parent=g12253.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 5468 5579 . + 1 ID=cds.g12253.t1;Parent=g12253.t1 #PROT g12253.t1 g12253 NPCPEIDAPFFSRISFWWLTGLVYTGFRRPLEKDDLWDLQQPDKANEIANRFADAWRKERRTDNPRLWLALAHAFGRPFWIAAAYKFVQDTLNFVSPILLSLLIKFTNDETIPTWRGYLYTAAFFLTAVVQSVMLHQYFHLTMIVGQRLRSAVVAAVYRKSLVLSNEARQEKTVGEIVNLMSVDAQRFQDLMTYLHMLWSAPYQIALSLYFLYNTLGLSILAGLGAMVLMIPLNGFIAVRDRRLQVRQMENKDWRIKIMSEVLAGIKVIKLYAWERSFLSTIGSIRQRELDVLKAASYLDAAQAFLWSCSPFLVSLATFATYSLTGGTLTADKAFVALSLFNILQFPLTMLPNLVSGLVEANVSHKRLTSFLLQGELDRTSVVRASPPDQPPPSAKGQAREVVRVRGGKFGWAADKVTLENVNFCVYESSLVAVVGTVGSGKSSLVSALLGDMHKIAGQVWVGGRVAYVPQQAWIQNATLRENILFGRAFDAERYATIVRACALEADLKILPAGDLTEIGEKGINLSGGQKQRVSMARAVYQDADVYLLDDPLSAVDAHVGRHMFDYVIGPQGLLKTKARLLVTHGIRYLPQTDLVVVMKNGRVEESGRYEELISAKRGFAELIRDHGSEAKGSADADDAETVAANTAEVENGSELAQNDEKKRRSDSLTKAPASGAKDSSVLIQKETSETGSVKAVVYADYGRAIGMYVSLAIIAMYIAAQGFQIGSNIWLSKWSSDETSDPDAVNSRLGKYLGGYAGLGLGQSIFVLITSFVLARGGIQAGKRLHDGMLTNVLRSPMSFFDTTPVGRIVNRFSKDMYTIDETIPQSFRSFLATFFRVISIIVVIAYTTPLFMVAIVPLGALYVFIQKFYVSTSRQLKRLESVSRSPIFAHFGETLTGVATIRAYGQEMRFIGDNDHKVDDNQRAYFPSIASNRWLAVRLEFIGNLIVLFASLFAVLKRGHIDSGLVGLSISYALSVTSSLNWMVRMSSDLETNIVAVERVKEYSETPTEAELVNPRSRPTEDWPSRGEIELSHYSVRYRPELDLVLKDVTCKVSGGEKIGICGRTGSGKTTTTLALFRILEPATGTIRIDGVDITTYGLEDLRSRLTIIPQEPVLFSGSLRSNLDPFEVYSDDEVWRALERSHLKSFVSTLEDGLLGKVAEGGENFSCGQRQLICLARALLRKTKILVLDEATASVDLQTDQLIQDTIRREFSDCTILTIAHRLNTIMDSDRVLVLDNGRVAELDTPANLLAQPTSVFYGMAREARLV* # PASA_UPDATE: g12259.t1, single gene model update, valid-1, status:[pasa:asmbl_8085,status:12], valid-1 NODE_545_length_21483_cov_41.7351 . gene 20787 21392 . - . ID=g12259;Name=g12259.t1 NODE_545_length_21483_cov_41.7351 . mRNA 20787 21392 . - . ID=g12259.t1;Parent=g12259;Name=g12259.t1 NODE_545_length_21483_cov_41.7351 . five_prime_UTR 21363 21392 . - . ID=g12259.t1.utr5p1;Parent=g12259.t1 NODE_545_length_21483_cov_41.7351 . exon 20787 21392 . - . ID=g12259.t1.exon1;Parent=g12259.t1 NODE_545_length_21483_cov_41.7351 . CDS 20916 21362 . - 0 ID=cds.g12259.t1;Parent=g12259.t1 NODE_545_length_21483_cov_41.7351 . three_prime_UTR 20787 20915 . - . ID=g12259.t1.utr3p1;Parent=g12259.t1 #PROT g12259.t1 g12259 MPMYWNRTIAVDEASSWDFARYIPDVVIVYLGSNDFYSTPNPSETSFSAGYAALLGDIARSYAPHAPMIVSVCGGYDTAMKPCPFVRSATEAFASTAYPNARYVDIPTDTLLNRPDDYGCMDHRNLAGQAKIAAYLTPIVRDIMGWAE* # ORIGINAL: g12254.t1 original gene structure, not modified by PASA NODE_545_length_21483_cov_41.7351 AUGUSTUS gene 5976 6377 . + . ID=g12254;Name=g12254.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS mRNA 5976 6377 . + . ID=g12254.t1;Parent=g12254;Name=g12254.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 5976 6377 . + . ID=g12254.t1.exon1;Parent=g12254.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 5976 6377 . + 0 ID=cds.g12254.t1;Parent=g12254.t1 #PROT g12254.t1 g12254 MSQAPSVIPPASAVAAADESADVPSVELVSHLVASLLNGRENDFRVLDDAREDDESLETEEEAAEAEREFGVLSSQMDAINTVLSSFESKSDDLNAKIRALLASVEQGDIDNTVETVVEEEEGEKASEGHVSN* # PASA_UPDATE: g12258.t1, single gene model update, valid-1, status:[pasa:asmbl_8082,status:12],[pasa:asmbl_8083,status:12],[pasa:asmbl_8084,status:12], valid-1 NODE_545_length_21483_cov_41.7351 . gene 16886 20424 . + . ID=g12258;Name=g12258.t1 NODE_545_length_21483_cov_41.7351 . mRNA 16886 20424 . + . ID=g12258.t1;Parent=g12258;Name=g12258.t1 NODE_545_length_21483_cov_41.7351 . exon 16886 17485 . + . ID=g12258.t1.exon1;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . CDS 16886 17485 . + 0 ID=cds.g12258.t1;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . exon 17673 18478 . + . ID=g12258.t1.exon2;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . CDS 17673 18478 . + 0 ID=cds.g12258.t1;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . exon 18821 19078 . + . ID=g12258.t1.exon3;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . CDS 18821 19078 . + 1 ID=cds.g12258.t1;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . exon 19427 20424 . + . ID=g12258.t1.exon4;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . CDS 19427 20384 . + 1 ID=cds.g12258.t1;Parent=g12258.t1 NODE_545_length_21483_cov_41.7351 . three_prime_UTR 20385 20424 . + . ID=g12258.t1.utr3p1;Parent=g12258.t1 #PROT g12258.t1 g12258 MDASLGFSDDGSLDQSLADPDSSRSASPTVERATEDVDRDTKVFERKITALIDGEILCAAVQSVTCSFRTHGVPHGRTSAIGNIFVTNYRFAFQYSAPSTQPISIPEAASSSGGTYSADASLSNYGHLRSSVHLSLEKRNSSPQIQALGDSERRLPVDLANDIINAKSRPKGFKWKLKTLASKNKKGMLKVGFVAVSSCVTQLSVEGRCDELLCADDALPVGERGFEIPLGLISSVEKVGGHRSIVEAYGLNVSCKDNRSFFVGFRLDRHVNNERRHMSDVINSGAFPVTFGRTPFAFLHRNAAMEDPGWKLYDAVAEYTRLGVPNATWRLSSANSRFELADTYPAHVVVPQSIGDATLAEVAHFRTKGRIPALSWLHPKTGASLTRCSQPKVGMLGKRCEGDEALLAAVAHANSVRPNMLSIMDARPFKNAMANQAMGAGTENMSFYENTELQFLDIENIHVMRESLKRLCDRRPDADWLHHVGLVLSGARKIVRLMSDNSASCLVHCSDGWDRTPQLTSLAMLCMDPYYRTIEGYAVLIEKEWLSFGHKFATRCGHGVRNPSDEQRSPVFVQFIDCTWQLLRQNPRAFEFSDKFLSLILDELHSGRYGTFLYDTEKSRVENDLDTTTRSLWSAVLGSDSASGFLNSGYAPAECGDVLIPDTSPKGLKAWTQYYFRDDDHAVDWADFEKSVADRMKQLRGGFERPESPTSDIGSAPGSPGAIRLMSRGFSSGTLNIGSARASVVRSMYADEGGLSETLGRSSSSSSLYERMREGYLVKQGGTIKTWRRRWFVLDESAALLSYYRQQGDKTPLGSIDLSVCSDVVQGEKLRGGEMQFKMVTPGRTYVIQADSARYCASWMTSIREVVDLRRDK* # ORIGINAL: g12257.t1 original gene structure, not modified by PASA NODE_545_length_21483_cov_41.7351 AUGUSTUS gene 13960 15566 . - . ID=g12257;Name=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS mRNA 13960 15566 . - . ID=g12257.t1;Parent=g12257;Name=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 15338 15566 . - . ID=g12257.t1.exon1;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 15338 15566 . - 0 ID=cds.g12257.t1;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 15025 15146 . - . ID=g12257.t1.exon2;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 15025 15146 . - 2 ID=cds.g12257.t1;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 14738 14896 . - . ID=g12257.t1.exon3;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 14738 14896 . - 0 ID=cds.g12257.t1;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 13960 14496 . - . ID=g12257.t1.exon4;Parent=g12257.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 13960 14496 . - 0 ID=cds.g12257.t1;Parent=g12257.t1 #PROT g12257.t1 g12257 MTGELVCVTGAAGFIAAHAVQQLLAKGYRVRGTVRNAKDEKLKFLREIGANAEENSRLELFEADLLKDGSFDKAIEGCDYVLHTASPFIIDKITNPQAQLIDPAVKGTTNVLDSVAKAPTVKRVVLTSSVAAVYGDPAERGPGHVYTEADWNFSSKIDTSPYPLSKRLAEEAAWEMAKKQSQYTLVTINPSLVFGPTLSGRADSTSVQLFDAYFNGKYKTGVAGLTFGIVDVRDVAKAHILAIEKTDANGRYITSAGSHSMLEIANVLRTKYAQYPLPNSTVPKFLLYLVGPIMAGISWHFISNNVDVPLAFDNSKIKKELGIEFTPIDKTLLDMAESLIGHGIIPKK* # ORIGINAL: g12255.t1 original gene structure, not modified by PASA NODE_545_length_21483_cov_41.7351 AUGUSTUS gene 7142 11117 . - . ID=g12255;Name=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS mRNA 7142 11117 . - . ID=g12255.t1;Parent=g12255;Name=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 11064 11117 . - . ID=g12255.t1.exon1;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 11064 11117 . - 0 ID=cds.g12255.t1;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 10802 10907 . - . ID=g12255.t1.exon2;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 10802 10907 . - 0 ID=cds.g12255.t1;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 10454 10595 . - . ID=g12255.t1.exon3;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 10454 10595 . - 2 ID=cds.g12255.t1;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS exon 7142 10253 . - . ID=g12255.t1.exon4;Parent=g12255.t1 NODE_545_length_21483_cov_41.7351 AUGUSTUS CDS 7142 10253 . - 1 ID=cds.g12255.t1;Parent=g12255.t1 #PROT g12255.t1 g12255 MDNQGLLRHFELAAQTVQAAPNQVSQQQRSAAEQVFLTLRQADDPFETCKFIIENTTVDYVLYEAVTAVKECVMRKWNSLGLDFIDGWRTYLLTLATTNERTPVFVRHRIVEAIAVFLKRGWLNASDNGASKSALFSQIWRLLSGNDARLQKLACTLLLEIMEQFATSSKASDVGLTWEFHDQCKRSFEQGELRSIFEACANLLASAASGGGGAADASILGAFIAMSERVLTWEFATGRVRRVGTFAGDGVASGTGPFRPPDSWRATVLNPSLLSAFFTTHEALRASGRSPDDPTYGQCGQCLVQLCSLAGAAVESETHAHAYIGVLVPLVARAVTMRAPSSLQGPELLWLGSLTSTLLCSHPLRHLVAVGAQHLDGVLMAMSAGACACMDPRFPPDEEEASWRVEALDQFLAGFVSVRSGAHADASMRASADERLRSFVGPVFEAYLTWRATKHGGCDDSIGGDDEEVCLDAETDDWVLHEDQLCDIASIARADIAKSLSCIAGALAARSERVNQWVSGALGDDERTALFEELHWILMTAGHVMADADDGEKPCVPEEVLLLALSSGGDPSRDPVVMCSQSLLGVAQAEAVVVGGGDVSRASPRLARTVVWLLRRWAATYLMAEEGVSMQQSTQAPSLIVAYGGDSVGGVATLEFVARKVAQNMVFWRGEPDVCRDSADLLLAVARSSTHAKQAFAASPSVRELVRMLADARSAVRSLPPKFQCNVVRALAKIAFEGGYFGEISQNISSRFSSAIGAADFARRSQDPVVVGELAACLEGMRGIVLATESRMAPAVLDFLRPHLVALPALMDVYRNCPDVYAFILDLAGDAVGSLIALVPDADCHMLYDCSLRLLETHHRNTVGRTSVLPGDEEERHDDLVRLLKLLTSIIKKDFVDFADDGTSFGGEVRVIGTPGSGPQVSDVVLFGLGILLPLLGGDILRYPDLCGQFYSLVQFVCDVYPERVAAMPPAFLQQFAHAIAEGLSADATSVAAECLASIAELAAHRYGIGNGSCRSRDSSPESLEGQARALDGILPHFLSGIVEMLLLHKFDMDLLEPSSEALFALVCSYPAHFSALAENHVRVVADEALRGRFATACGALMSANEVRGVLDRTNKAKFRKNLEAFLMDVRGFLRRK* # PASA_UPDATE: g12256.t1, single gene model update, valid-1, status:[pasa:asmbl_8081,status:3], valid-1 NODE_545_length_21483_cov_41.7351 . gene 11693 13492 . + . ID=g12256;Name=g12256.t1 NODE_545_length_21483_cov_41.7351 . mRNA 11693 13492 . + . ID=g12256.t1;Parent=g12256;Name=g12256.t1 NODE_545_length_21483_cov_41.7351 . five_prime_UTR 11693 11707 . + . ID=g12256.t1.utr5p1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . five_prime_UTR 11832 11874 . + . ID=g12256.t1.utr5p2;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . five_prime_UTR 11988 11992 . + . ID=g12256.t1.utr5p3;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 11693 11707 . + . ID=g12256.t1.exon1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 11832 11874 . + . ID=g12256.t1.exon2;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 11988 12064 . + . ID=g12256.t1.exon3;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . CDS 11993 12064 . + 0 ID=cds.g12256.t1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 12285 12381 . + . ID=g12256.t1.exon4;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . CDS 12285 12381 . + 0 ID=cds.g12256.t1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 12666 12735 . + . ID=g12256.t1.exon5;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . CDS 12666 12735 . + 2 ID=cds.g12256.t1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 12991 13108 . + . ID=g12256.t1.exon6;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . CDS 12991 13108 . + 1 ID=cds.g12256.t1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . exon 13289 13492 . + . ID=g12256.t1.exon7;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . CDS 13289 13399 . + 0 ID=cds.g12256.t1;Parent=g12256.t1 NODE_545_length_21483_cov_41.7351 . three_prime_UTR 13400 13492 . + . ID=g12256.t1.utr3p1;Parent=g12256.t1 #PROT g12256.t1 g12256 MVFKAVCVLKGDAAVTGTVTFTQEGDGSPTVIEGSIKGLTPGQHGFHVHEFGDNTNGCTSAGPHFNPFGKTHGAPSDDVRHVGDLGNVTADNDGVANFKISDRLVSLSGQHSVVGRTMVVHADIDDLGKGGHEFSLTTGNAGGRLACGVIGISKI* # ORIGINAL: g6554.t1 original gene structure, not modified by PASA NODE_3234_length_3946_cov_42.4405 AUGUSTUS gene 116 238 . - . ID=g6554;Name=g6554.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS mRNA 116 238 . - . ID=g6554.t1;Parent=g6554;Name=g6554.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS exon 116 238 . - . ID=g6554.t1.exon1;Parent=g6554.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS CDS 116 238 . - 0 ID=cds.g6554.t1;Parent=g6554.t1 #PROT g6554.t1 g6554 MLGTNKRRRLAASFGVMDVSSEAALQRVIEAKSAHADVIED # ORIGINAL: g6555.t1 original gene structure, not modified by PASA NODE_3234_length_3946_cov_42.4405 AUGUSTUS gene 648 2564 . - . ID=g6555;Name=g6555.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS mRNA 648 2564 . - . ID=g6555.t1;Parent=g6555;Name=g6555.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS exon 648 2564 . - . ID=g6555.t1.exon1;Parent=g6555.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS CDS 648 2564 . - 0 ID=cds.g6555.t1;Parent=g6555.t1 #PROT g6555.t1 g6555 MEVVGRDAGAVGGLVKAAAVASPPATIKKARDSSYGTGDFKEEYSGLRVKNRLVSSGTLRDRMEGRTMVRINKIASSYATSAACVAGDWVTIGVLVEKGDARVGKDGRKYGVWKIGDLSGTIVTLFLFGDAHEGHWKEQPGSVVGLLNPSILPPREGSSKSDDIALTVDHPGKIMRLGDSVDFARCKGIRKDNTRCSMVVNLQLGEFCEYHVTAAFKNSRSRRMEFNVGYGVPDKDNGGKAVAPKRAMGGGGASAGVYVVGGQSLSGATGAEPSPISASERGGKTAKYVSGVMEAGSKAFERAVKGGSSGARNFLYASSGDDSKKKKLAERRATAVLPAHMAKTLGYDPSVGRGSQNEARVAAVSADPIAAIKSNVALMKNVSAVDSASQKEEKTAKTASRRSPAVERKAGGPVIVSDAKSYLQAIRAGKSLSECAVAATTPSTPRTSGGGASQTFGILTMPTFPLGMASQSSQASQQGAGANPYKPMLGRGLDPGMSVDLGFSGKKDAAVRERAVALVQALGGVEKANPNRPHVPLAPSAAATIAQRAMQSAKRMANELDEVEEEERGDDKVSAAAGYATQNNGADAGAVRAHPAKEARLEPPAHVLLVKTLKLKRRRTEDDEEHDLGVLVCRESVM* # ORIGINAL: g6556.t1 original gene structure, not modified by PASA NODE_3234_length_3946_cov_42.4405 AUGUSTUS gene 3529 3765 . + . ID=g6556;Name=g6556.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS mRNA 3529 3765 . + . ID=g6556.t1;Parent=g6556;Name=g6556.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS exon 3529 3765 . + . ID=g6556.t1.exon1;Parent=g6556.t1 NODE_3234_length_3946_cov_42.4405 AUGUSTUS CDS 3529 3765 . + 0 ID=cds.g6556.t1;Parent=g6556.t1 #PROT g6556.t1 g6556 MTGEGDGAERDETLRQMHLRGVDNVRGWKYTRETLTNSEKKEIEQNIRELFDLCRRCGREGHFTSACYASTNSAGDAL* # PASA_UPDATE: g7818.t1, single gene model update, valid-1, status:[pasa:asmbl_4123,status:12], valid-1 NODE_2356_length_6591_cov_37.712 . gene 1 891 . - . ID=g7818;Name=g7818.t1 NODE_2356_length_6591_cov_37.712 . mRNA 1 891 . - . ID=g7818.t1;Parent=g7818;Name=g7818.t1 NODE_2356_length_6591_cov_37.712 . five_prime_UTR 833 891 . - . ID=g7818.t1.utr5p1;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . exon 747 891 . - . ID=g7818.t1.exon1;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . CDS 747 832 . - 0 ID=cds.g7818.t1;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . exon 425 543 . - . ID=g7818.t1.exon2;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . CDS 425 543 . - 1 ID=cds.g7818.t1;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . exon 230 270 . - . ID=g7818.t1.exon3;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . CDS 230 270 . - 2 ID=cds.g7818.t1;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . exon 1 112 . - . ID=g7818.t1.exon4;Parent=g7818.t1 NODE_2356_length_6591_cov_37.712 . CDS 1 112 . - 0 ID=cds.g7818.t1;Parent=g7818.t1;3_prime_partial=true #PROT g7818.t1 g7818 MSTEAAFQNHNAFREAIADVRNDNTATNWALIGHVDGNPALVDVIGTGSGGPNELASHLSSSGFYYGLVRVAERVDMSNTVKFVYIHWLGEDVPFAKKGRFGVVHGSIQKHFHVSATNL # PASA_UPDATE: g7819.t1, single gene model update, valid-1, status:[pasa:asmbl_4122,status:3], valid-1 NODE_2356_length_6591_cov_37.712 . gene 2076 5920 . + . ID=g7819;Name=g7819.t1 NODE_2356_length_6591_cov_37.712 . mRNA 2076 5920 . + . ID=g7819.t1;Parent=g7819;Name=g7819.t1 NODE_2356_length_6591_cov_37.712 . five_prime_UTR 2076 2293 . + . ID=g7819.t1.utr5p1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 2076 2492 . + . ID=g7819.t1.exon1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 2294 2492 . + 0 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 2650 2717 . + . ID=g7819.t1.exon2;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 2650 2717 . + 2 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 3033 3163 . + . ID=g7819.t1.exon3;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 3033 3163 . + 0 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 3334 3478 . + . ID=g7819.t1.exon4;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 3334 3478 . + 1 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 3728 3857 . + . ID=g7819.t1.exon5;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 3728 3857 . + 0 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 4177 4394 . + . ID=g7819.t1.exon6;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 4177 4394 . + 2 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 4767 4856 . + . ID=g7819.t1.exon7;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 4767 4856 . + 0 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 5205 5328 . + . ID=g7819.t1.exon8;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 5205 5328 . + 0 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . exon 5497 5920 . + . ID=g7819.t1.exon9;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . CDS 5497 5666 . + 2 ID=cds.g7819.t1;Parent=g7819.t1 NODE_2356_length_6591_cov_37.712 . three_prime_UTR 5667 5920 . + . ID=g7819.t1.utr3p1;Parent=g7819.t1 #PROT g7819.t1 g7819 MAASGVYILDLKGKVLISRNYRGDIPNTVADKFLPLVLEQEEEGVQSPIVVYEGVTFVYIKHNNLYLMATTKKNANVALIFVFLYKVVEVFKEYFKEMEEESIRDNFVIIYELLDEVMDFGYPQTTESKILQEFITQEGYKLDVQVRPPPAVTNAVSWRTENIKYRKNEVFLDVVESVNLLASANGQVLRSEIVGAIKMRVFLSGMPELRLGLNDKVLFETTGRNLQKGKAVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTVVKPLIWIEAVVERHSHSRVEYMIKAKSQFKRRSTANNVEIVIPVPSDADSPKFKTTIGTVKYSPERNAIIWSIKQFQGGKEFLMRAHFGLPSIESEDPEARPPITVSFEIPYYTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRMA* # ORIGINAL: g1119.t1 original gene structure, not modified by PASA NODE_2182_length_7377_cov_32.9117 AUGUSTUS gene 2783 7168 . + . ID=g1119;Name=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS mRNA 2783 7168 . + . ID=g1119.t1;Parent=g1119;Name=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 2783 2785 . + . ID=g1119.t1.exon1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 2783 2785 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 3361 3561 . + . ID=g1119.t1.exon2;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 3361 3561 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 3967 4104 . + . ID=g1119.t1.exon3;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 3967 4104 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 4436 4513 . + . ID=g1119.t1.exon4;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 4436 4513 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 4729 4839 . + . ID=g1119.t1.exon5;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 4729 4839 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 5287 5363 . + . ID=g1119.t1.exon6;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 5287 5363 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 5546 5615 . + . ID=g1119.t1.exon7;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 5546 5615 . + 1 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 5866 6024 . + . ID=g1119.t1.exon8;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 5866 6024 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 6223 6308 . + . ID=g1119.t1.exon9;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 6223 6308 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 6521 6626 . + . ID=g1119.t1.exon10;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 6521 6626 . + 1 ID=cds.g1119.t1;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 7031 7168 . + . ID=g1119.t1.exon11;Parent=g1119.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 7031 7168 . + 0 ID=cds.g1119.t1;Parent=g1119.t1 #PROT g1119.t1 g1119 MYCDEFKAAPLAALPYGFFLARHVTGRSTAARMFGIHLIEHHIRFAWNSAPDVEKGAVKQGILDLLATGTAPLMTDEHSIREKLAQLVAELAKREWPQRWPSLFADLKGICEMGPTQEELVLLAVRNIGEEVTNTSDELKAQRRREIAMGLNVEVNGLMPYLAGLLNVHVTGLAGGVDTELHIRLAKSVLNAICAYVEWMPMSLIESLRLMEVLCGQLLQPSSVRLAACECLVLLMGRRGKEDRRPLLGMFAAMGLVHAAVRNDDATADGGKFVKRLCQALCLLGTDQLCPLCTSDASVPSELSTCVSYIQTMLEFAGHPSLMVSSFTIPLWVAILRHDVLKTHGDPAGSSASSHFSRLDFEGADEFLGFFSVYRNRLMDIVRLSTELA # ORIGINAL: g1118.t1 original gene structure, not modified by PASA NODE_2182_length_7377_cov_32.9117 AUGUSTUS gene 292 1659 . - . ID=g1118;Name=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS mRNA 292 1659 . - . ID=g1118.t1;Parent=g1118;Name=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 1547 1659 . - . ID=g1118.t1.exon1;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 1547 1659 . - 0 ID=cds.g1118.t1;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 1078 1266 . - . ID=g1118.t1.exon2;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 1078 1266 . - 1 ID=cds.g1118.t1;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 822 954 . - . ID=g1118.t1.exon3;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 822 954 . - 1 ID=cds.g1118.t1;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS exon 292 660 . - . ID=g1118.t1.exon4;Parent=g1118.t1 NODE_2182_length_7377_cov_32.9117 AUGUSTUS CDS 292 660 . - 0 ID=cds.g1118.t1;Parent=g1118.t1 #PROT g1118.t1 g1118 MGLVCRIQGTRLGVCPTTCTCTGGAVVSCALPTGIAELDLAARNCMVVAGPRAPNSIENGWKLSPKAQVIVKVADMGLSRDTGASRDYYVAKTRRKLPVKWMAPESLDKRIFTHSSDVWSFGVVMWEVFSRGAKPYPGLETMPYLNKRMDPPKGCPTSATSVMEACWRKHPETRPQFSQLVLQLRRGMAVLCGGESAGSSVDTASPGAAGTSCTTDYHVPLGLSSQTYTLTAPDSLYAESVEGSDGGMHTLQIQSLWRASPLRDLSQ* # ORIGINAL: g1826.t1 original gene structure, not modified by PASA NODE_3173_length_4109_cov_35.9224 AUGUSTUS gene 1125 3568 . + . ID=g1826;Name=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS mRNA 1125 3568 . + . ID=g1826.t1;Parent=g1826;Name=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 1125 1190 . + . ID=g1826.t1.exon1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 1125 1190 . + 0 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 1406 1518 . + . ID=g1826.t1.exon2;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 1406 1518 . + 0 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 1879 2092 . + . ID=g1826.t1.exon3;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 1879 2092 . + 1 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 2352 2434 . + . ID=g1826.t1.exon4;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 2352 2434 . + 0 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 2579 2862 . + . ID=g1826.t1.exon5;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 2579 2862 . + 1 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 3195 3341 . + . ID=g1826.t1.exon6;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 3195 3341 . + 2 ID=cds.g1826.t1;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS exon 3561 3568 . + . ID=g1826.t1.exon7;Parent=g1826.t1 NODE_3173_length_4109_cov_35.9224 AUGUSTUS CDS 3561 3568 . + 2 ID=cds.g1826.t1;Parent=g1826.t1 #PROT g1826.t1 g1826 MNVVMHTLAIKRYAPNIKTLVQVVNPDYKMHAKDAGGDFVVSSDELKLSLLARSCTVPSIVALVTNLLQTYRPPKEVMKRHKEPWLAEYIHGCMHGIYSVILPEYFVGKRFREAAVDLFMGFGVTLFAVEVTTLNHAGDVVARVLLNPVDYNIREADVGFLFCESPDVCMRIKNFGMNMAAGGGGGGDEGRSSRFEGSNVSTEVRRRVLAQAAGTVDRGEDAGLIKGAGAKGTPSWKHRIATAFGKMRRNSNSLADPNGDGDNERVLVSDDEAEFESGEYAGRDAVRMEVIDRMRSSVPLPDGV* # ORIGINAL: g12094.t1 original gene structure, not modified by PASA NODE_4984_length_1097_cov_38.18 AUGUSTUS gene 133 890 . + . ID=g12094;Name=g12094.t1 NODE_4984_length_1097_cov_38.18 AUGUSTUS mRNA 133 890 . + . ID=g12094.t1;Parent=g12094;Name=g12094.t1 NODE_4984_length_1097_cov_38.18 AUGUSTUS exon 133 281 . + . ID=g12094.t1.exon1;Parent=g12094.t1 NODE_4984_length_1097_cov_38.18 AUGUSTUS CDS 133 281 . + 0 ID=cds.g12094.t1;Parent=g12094.t1 NODE_4984_length_1097_cov_38.18 AUGUSTUS exon 509 890 . + . ID=g12094.t1.exon2;Parent=g12094.t1 NODE_4984_length_1097_cov_38.18 AUGUSTUS CDS 509 890 . + 1 ID=cds.g12094.t1;Parent=g12094.t1 #PROT g12094.t1 g12094 MSAERNGTFYIRRLVTCRRSSRNWQGVIVQLIVLLFPVIDMANVFPLVAITTANNLLQCIPPRFLEGRSLRTNKILTRLAIILPPFALGLTIGTISIIIKVAGLFAFFLELIIPCALQLLSIKECRRLFHACSGRVAWVTPYSGWHSHAWVSSAILAYSSGAFVIAFVLIVQPHAF* # ORIGINAL: g13863.t1 original gene structure, not modified by PASA NODE_893_length_16141_cov_43.0166 AUGUSTUS gene 14332 15937 . + . ID=g13863;Name=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS mRNA 14332 15937 . + . ID=g13863.t1;Parent=g13863;Name=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 14332 14814 . + . ID=g13863.t1.exon1;Parent=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 14332 14814 . + 0 ID=cds.g13863.t1;Parent=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 15047 15238 . + . ID=g13863.t1.exon2;Parent=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 15047 15238 . + 0 ID=cds.g13863.t1;Parent=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 15659 15937 . + . ID=g13863.t1.exon3;Parent=g13863.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 15659 15937 . + 0 ID=cds.g13863.t1;Parent=g13863.t1 #PROT g13863.t1 g13863 MTTRSFSTLPQGPSDALRDIGQLIAADRDARGQWGAPRAATSIGVGRRPAKPSSPGNAMPPSPQKPALNARTPVAPIGSSGGARNKSAPPPRTLPAAPLATPAHTSNRARLTWAERGNIIELFIECMAEDNYETWRFLKEVLDGLARSAPGNVLLAENQTQLQLLHYIARVHRVAKENVTSRELRIAESIEAAFPDHMRHIVSGRTSVDRRILARDASTTGIDSPTSLDGTSNSHGHGGHHVTIEQQNRAESDSPDPHSGQYYHRPTSAHRPHTTHNNHHAPSTSGLDSHSSRRVFAVEDDDGEFRVIGREGILALN* # PASA_UPDATE: g13861.t1, single gene model update, valid-1, status:[pasa:asmbl_9868,status:3], valid-1 NODE_893_length_16141_cov_43.0166 . gene 8584 10125 . - . ID=g13861;Name=g13861.t1 NODE_893_length_16141_cov_43.0166 . mRNA 8584 10125 . - . ID=g13861.t1;Parent=g13861;Name=g13861.t1 NODE_893_length_16141_cov_43.0166 . five_prime_UTR 10050 10125 . - . ID=g13861.t1.utr5p1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 9990 10125 . - . ID=g13861.t1.exon1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 9990 10049 . - 0 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 9760 9874 . - . ID=g13861.t1.exon2;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 9760 9874 . - 0 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 9594 9670 . - . ID=g13861.t1.exon3;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 9594 9670 . - 2 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 9379 9473 . - . ID=g13861.t1.exon4;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 9379 9473 . - 0 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 8963 9254 . - . ID=g13861.t1.exon5;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 8963 9254 . - 1 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . exon 8584 8743 . - . ID=g13861.t1.exon6;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . CDS 8636 8743 . - 0 ID=cds.g13861.t1;Parent=g13861.t1 NODE_893_length_16141_cov_43.0166 . three_prime_UTR 8584 8635 . - . ID=g13861.t1.utr3p1;Parent=g13861.t1 #PROT g13861.t1 g13861 MSRKTLVLFDVDGTLTAPRKVITPEMHAFVRKLREKVTVGLVGGSDHVKIQEQMGSSDVNHEFDFVFSENGLVAYKAGNLIGRASIKDHLGEEKLSRFINFVLVYLGTHVNIPKKRGTFVEFRNGMLNICPIGRNCNQEERDEFEQYDKIHNVRSTMVDVLRKEFSDTDLQYSIGGQISFDVFPKGWDKTFCLRHVEKEGFEAIHFFGDKTMKGGNDHEIFEDPRTIGHTVTSPDDTRAQLTKLFLEN* # ORIGINAL: g13858.t1 original gene structure, not modified by PASA NODE_893_length_16141_cov_43.0166 AUGUSTUS gene 77 4162 . - . ID=g13858;Name=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS mRNA 77 4162 . - . ID=g13858.t1;Parent=g13858;Name=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 3876 4162 . - . ID=g13858.t1.exon1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 3876 4162 . - 0 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 3682 3779 . - . ID=g13858.t1.exon2;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 3682 3779 . - 1 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 3456 3570 . - . ID=g13858.t1.exon3;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 3456 3570 . - 2 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 3241 3324 . - . ID=g13858.t1.exon4;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 3241 3324 . - 1 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 2866 3027 . - . ID=g13858.t1.exon5;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 2866 3027 . - 1 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 1618 2318 . - . ID=g13858.t1.exon6;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 1618 2318 . - 1 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 1250 1443 . - . ID=g13858.t1.exon7;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 1250 1443 . - 2 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 1000 1120 . - . ID=g13858.t1.exon8;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 1000 1120 . - 0 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 524 669 . - . ID=g13858.t1.exon9;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 524 669 . - 2 ID=cds.g13858.t1;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 77 181 . - . ID=g13858.t1.exon10;Parent=g13858.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 77 181 . - 0 ID=cds.g13858.t1;Parent=g13858.t1 #PROT g13858.t1 g13858 MLGDKLKSVRGRIRIHVPYAYGSIRLEHLESLRPHIPAFIKASAPFGLLVALFHIFLGILGWQLSLLATAAKALRQAYVNAFGPSVEVLSLEEIVRASGYACESHQVTTKDGYILTVFRIGRQCSSADMPSRRGAPVLMMHGLVDCAFTWLINGPGKSLAYLLVDQGYDVWLGNNRGTRYSTRHVYLAHSDNDFWKYTWDDMARRDFPDTIDHVIKTTGYSKIGYVGHSEGTIQAFASFCLDPTIADKLRVPKKLKSPEGRPQHQYVDGLTEIEVRSTAEACALLSRGQRSRQVASTGSNAESSRSHAVFAVRVVRAPLDGDGEGVLGDPKYVHTSRLALVDLAGSERNRKTGSSGERQTEANSINQSMLALSNCMRALRSIQSGKKGVFMPFRDSLLTTLFRRHFEGEGRVAVIVCANPCASDHSETVHALGFSDVVQSLSTATPKPKVRTVALAAGRGRARKMIRKAQKTVDDDGDIASSGESSGDEEGETELQRIDVDIPDARDVDGDALGLLDAMDGDEGEGSLFEGLGPEAASMVIRRMENAPYSDEELIAMGSKEIQKYIAFMNSVQEKRIRKQAADLATKEDRFKKRLTEYSHEMDQLKSIAREHEALQQASKVERDRHRAEIEAMDDMLISVRESLAAKDEAIRKHNSIVSALQDDILKLKEK # ORIGINAL: g13860.t1 original gene structure, not modified by PASA NODE_893_length_16141_cov_43.0166 AUGUSTUS gene 6819 8435 . + . ID=g13860;Name=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS mRNA 6819 8435 . + . ID=g13860.t1;Parent=g13860;Name=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 6819 6984 . + . ID=g13860.t1.exon1;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 6819 6984 . + 0 ID=cds.g13860.t1;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 7098 7249 . + . ID=g13860.t1.exon2;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 7098 7249 . + 2 ID=cds.g13860.t1;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 7400 7792 . + . ID=g13860.t1.exon3;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 7400 7792 . + 0 ID=cds.g13860.t1;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 7956 8087 . + . ID=g13860.t1.exon4;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 7956 8087 . + 0 ID=cds.g13860.t1;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS exon 8298 8435 . + . ID=g13860.t1.exon5;Parent=g13860.t1 NODE_893_length_16141_cov_43.0166 AUGUSTUS CDS 8298 8435 . + 0 ID=cds.g13860.t1;Parent=g13860.t1 #PROT g13860.t1 g13860 MAETLSSTAALPSRLQKREEERQADRDRRRQEKQADAPPSESADFFRTNFTKAKEEIMSTLAALVAGSASITDDLDLTSAKIQNLQQFLAESTLFLPTFDIRSSQEQIISLQADLAARREELAPKKKFAFKTRKASDTPRAVQPDSQPVEAPRAKFSMDLPGFSRTSDATLIKRPGELAGSDFALSHLTDCKVVVMDLASAIHIDRLDNCVVLLGPVAGSVFIDSCTNTTFVVACHQLRIHTTVKCDFLIHVATRAIIEDCRDVRFGPYAWTYPEFESQFEASRLDRHHNNWNDIDDFKWLKPDEASPNWSLIPEGERKVFVGDSL* # PASA_UPDATE: g13859.t1, single gene model update, valid-1, status:[pasa:asmbl_9867,status:12], valid-1 NODE_893_length_16141_cov_43.0166 . gene 4738 6528 . - . ID=g13859;Name=g13859.t1 NODE_893_length_16141_cov_43.0166 . mRNA 4738 6528 . - . ID=g13859.t1;Parent=g13859;Name=g13859.t1 NODE_893_length_16141_cov_43.0166 . five_prime_UTR 6425 6528 . - . ID=g13859.t1.utr5p1;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . exon 6297 6528 . - . ID=g13859.t1.exon1;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . CDS 6297 6424 . - 0 ID=cds.g13859.t1;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . exon 6020 6143 . - . ID=g13859.t1.exon2;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . CDS 6020 6143 . - 1 ID=cds.g13859.t1;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . exon 4738 4984 . - . ID=g13859.t1.exon3;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . CDS 4829 4984 . - 0 ID=cds.g13859.t1;Parent=g13859.t1 NODE_893_length_16141_cov_43.0166 . three_prime_UTR 4738 4828 . - . ID=g13859.t1.utr3p1;Parent=g13859.t1 #PROT g13859.t1 g13859 MASSQQEGPTEAQIVNFFNQLRGEQKGIMEKVAELEQEKTEHNLVIEAIKDLDPKRKCFRMIGGVLVERTVAEVLPALIVTRDGLDNIIKTLNEKLVAKGNEINAFRQRFNIRVRGEGGEKESEGKAIQNQGVLA* # PASA_UPDATE: g13862.t1, single gene model update, valid-1, status:[pasa:asmbl_9865,status:3], valid-1 NODE_893_length_16141_cov_43.0166 . gene 10467 13714 . + . ID=g13862;Name=g13862.t1 NODE_893_length_16141_cov_43.0166 . mRNA 10467 13714 . + . ID=g13862.t1;Parent=g13862;Name=g13862.t1 NODE_893_length_16141_cov_43.0166 . five_prime_UTR 10467 10667 . + . ID=g13862.t1.utr5p1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . exon 10467 11093 . + . ID=g13862.t1.exon1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . CDS 10668 11093 . + 0 ID=cds.g13862.t1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . exon 11223 11645 . + . ID=g13862.t1.exon2;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . CDS 11223 11645 . + 0 ID=cds.g13862.t1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . exon 11772 12560 . + . ID=g13862.t1.exon3;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . CDS 11772 12560 . + 0 ID=cds.g13862.t1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . exon 12692 12983 . + . ID=g13862.t1.exon4;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . CDS 12692 12983 . + 0 ID=cds.g13862.t1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . exon 13122 13714 . + . ID=g13862.t1.exon5;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . CDS 13122 13447 . + 2 ID=cds.g13862.t1;Parent=g13862.t1 NODE_893_length_16141_cov_43.0166 . three_prime_UTR 13448 13714 . + . ID=g13862.t1.utr3p1;Parent=g13862.t1 #PROT g13862.t1 g13862 MSEVVVESSLDSQSREERIAARRTRIEARLRSQQESQSNDEETNIRRKKNEDLKDPGKSKSQIAQSKQRVDKLRSYGTELITNVRVAGDARESARRHEEEKKLETRRARLEEEIKVSAEKCNEMTQKWATPLAKEIPQELNEMMTEQQSLCDSIIESKNKLIQEFQHELKSKDDEYVKDLKRQADDIDLLLERMDKQIKELQRAYREELTEIEKSFLEERISLMESNRKEIEALMKQRRDKEQEFMETREKRVEENESALEQLRVNDAEEYNMIKIKLETDVQVLEQQLQAMKATYQLNSEKLEYNFQVLKKRDDENQITITQQKRKITRMTDVLNNLRAKYAKQERTYREENMQLTDDYARITEQFKELQKKFRHFESADGEKYSELWAMNQEQVLELVQRVLEADKVLTEQQLGLRWRPPSERVFDPAFVPSHDSAPSHGHNAEGRGGDGHVLGGTAAPPGTSRGADGQGGYAESVHSDHNDTSVNVTVGTGGNGEALSPGTIKRILELLCDETGFLVEEKLTRLLAPLDKGEQSLMKLDSIFKALSIHTEEDIHKLASYFIITRDETEDDEMDEAAAAIARANNIMTGKRSDSTEDNRGLPQLIHPNDVVRALRAFVQAHGTSAAHATNRTQRGDSSEVVGAADENEYWDRLVNIISPTESRIWAGMLDGLEKYNSLLSQRWELINETDSLRTQNDELRTLLSQYMTSKVNQDLRVPPTRVMGEEFMTLQQQQQQQQHYAQTHQSRRG* # ORIGINAL: g10458.t1 original gene structure, not modified by PASA NODE_3171_length_4113_cov_23.7043 AUGUSTUS gene 265 3843 . + . ID=g10458;Name=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS mRNA 265 3843 . + . ID=g10458.t1;Parent=g10458;Name=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 265 409 . + . ID=g10458.t1.exon1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 265 409 . + 0 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 595 697 . + . ID=g10458.t1.exon2;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 595 697 . + 2 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 966 990 . + . ID=g10458.t1.exon3;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 966 990 . + 1 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 1411 1480 . + . ID=g10458.t1.exon4;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 1411 1480 . + 0 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 1684 1780 . + . ID=g10458.t1.exon5;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 1684 1780 . + 2 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 1983 2017 . + . ID=g10458.t1.exon6;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 1983 2017 . + 1 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 2192 2329 . + . ID=g10458.t1.exon7;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 2192 2329 . + 2 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 2518 2677 . + . ID=g10458.t1.exon8;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 2518 2677 . + 2 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 2789 2895 . + . ID=g10458.t1.exon9;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 2789 2895 . + 1 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 3030 3238 . + . ID=g10458.t1.exon10;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 3030 3238 . + 2 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 3501 3544 . + . ID=g10458.t1.exon11;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 3501 3544 . + 0 ID=cds.g10458.t1;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS exon 3717 3843 . + . ID=g10458.t1.exon12;Parent=g10458.t1 NODE_3171_length_4113_cov_23.7043 AUGUSTUS CDS 3717 3843 . + 1 ID=cds.g10458.t1;Parent=g10458.t1 #PROT g10458.t1 g10458 MAAVCPACQNGGLCDKGIAASGACLCKPGFTGALCDQCLPGFYGPNCLACGACDALGGKCADGIANVGACVCNTGYSGATCSDLPHLRSWNCNAGFVGNLCDTCDVGHYGPDCLECPPCVSGTCDAGRKGFGVCKCAPGWTGELCDACLPGFFGLSCSKCPRCDAAGGFCRDNITGDGLCECNAGYRGTLCDSCTALRYGSTCQECPQCDRGMCLQGRTGAGTCECQPSFTGLLCQECVAKRFGQDCTSCPACQNGGVCDAGRAGSGVCKCVGAYTGTLCEQCQPNFYGAGCTACPACDILGTVNSKCADGITGSGKCVCREGFTGALCDQCAPGFFDVKCIACPACDRGTCDAGRTATGVCQCSPGFTSALCNHCVTGRYGTDCTECPACVNGRCNETRAGDGKCICNAGWTGALCDT* # PASA_UPDATE: g5831.t1, single gene model update, valid-1, status:[pasa:asmbl_6987,status:12], valid-1 NODE_4117_length_2167_cov_36.1004 . gene 1372 2029 . - . ID=g5831;Name=g5831.t1 NODE_4117_length_2167_cov_36.1004 . mRNA 1372 2029 . - . ID=g5831.t1;Parent=g5831;Name=g5831.t1 NODE_4117_length_2167_cov_36.1004 . exon 1885 2029 . - . ID=g5831.t1.exon1;Parent=g5831.t1 NODE_4117_length_2167_cov_36.1004 . CDS 1885 2029 . - 0 ID=cds.g5831.t1;Parent=g5831.t1 NODE_4117_length_2167_cov_36.1004 . exon 1372 1629 . - . ID=g5831.t1.exon2;Parent=g5831.t1 NODE_4117_length_2167_cov_36.1004 . CDS 1502 1629 . - 2 ID=cds.g5831.t1;Parent=g5831.t1 NODE_4117_length_2167_cov_36.1004 . three_prime_UTR 1372 1501 . - . ID=g5831.t1.utr3p1;Parent=g5831.t1 #PROT g5831.t1 g5831 MFVGPCIAPGSADARGQESGPRVTLVFFLGGCTFAEIAAIRFLAQQDEGRRDYVIATTKIINGASLLGTCVDKLTSGLRSEVLGLKEPDV* # ORIGINAL: g5830.t1 original gene structure, not modified by PASA NODE_4117_length_2167_cov_36.1004 AUGUSTUS gene 302 427 . + . ID=g5830;Name=g5830.t1 NODE_4117_length_2167_cov_36.1004 AUGUSTUS mRNA 302 427 . + . ID=g5830.t1;Parent=g5830;Name=g5830.t1 NODE_4117_length_2167_cov_36.1004 AUGUSTUS exon 302 427 . + . ID=g5830.t1.exon1;Parent=g5830.t1 NODE_4117_length_2167_cov_36.1004 AUGUSTUS CDS 302 427 . + 0 ID=cds.g5830.t1;Parent=g5830.t1 #PROT g5830.t1 g5830 DLKRFSELVRFYQRRNAHIFETLEKQGLQTADSLVHYSPPS* # PASA_UPDATE: g8370.t1, single gene model update, valid-1, status:[pasa:asmbl_5228,status:12], valid-1 NODE_2913_length_4760_cov_45.4843 . gene 2886 4703 . + . ID=g8370;Name=g8370.t1 NODE_2913_length_4760_cov_45.4843 . mRNA 2886 4703 . + . ID=g8370.t1;Parent=g8370;Name=g8370.t1 NODE_2913_length_4760_cov_45.4843 . five_prime_UTR 2886 2989 . + . ID=g8370.t1.utr5p1;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . exon 2886 3198 . + . ID=g8370.t1.exon1;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . CDS 2990 3198 . + 0 ID=cds.g8370.t1;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . exon 3399 3967 . + . ID=g8370.t1.exon2;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . CDS 3399 3967 . + 1 ID=cds.g8370.t1;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . exon 4326 4537 . + . ID=g8370.t1.exon3;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . CDS 4326 4537 . + 2 ID=cds.g8370.t1;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . exon 4698 4703 . + . ID=g8370.t1.exon4;Parent=g8370.t1 NODE_2913_length_4760_cov_45.4843 . CDS 4698 4703 . + 0 ID=cds.g8370.t1;Parent=g8370.t1 #PROT g8370.t1 g8370 MAVCRHGHGLRRRILLAFAALVLTVVFGDVDAIVPSDVQLVASSVPQRTLATATITVQATGPNGYTENARLVIWRLSPSNTSTVLQQITASGVVAFDGASPASVSFPGINLAALFGGSVAASAIPLGVNVGVRFRFVIEHGPTFAVVSPHANITSSYNGTASISLQSAFPAVNYDDASTSVIVVGDGGATESVTLRLSKGAVMSTPARAFTFTANFDGGYPNALANISVVVPSGSYAATAVTSVTATALNISGKFEAYPRNLNLGGLFLRSIFAGFGDNAEVGSRIAVEMANADPALLPYTPIVFNARANTACTRLSAVDAILSLLQPAQM* # ORIGINAL: g8369.t1 original gene structure, not modified by PASA NODE_2913_length_4760_cov_45.4843 AUGUSTUS gene 496 2081 . - . ID=g8369;Name=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS mRNA 496 2081 . - . ID=g8369.t1;Parent=g8369;Name=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS exon 2025 2081 . - . ID=g8369.t1.exon1;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS CDS 2025 2081 . - 0 ID=cds.g8369.t1;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS exon 1730 1881 . - . ID=g8369.t1.exon2;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS CDS 1730 1881 . - 0 ID=cds.g8369.t1;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS exon 1392 1478 . - . ID=g8369.t1.exon3;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS CDS 1392 1478 . - 1 ID=cds.g8369.t1;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS exon 1049 1190 . - . ID=g8369.t1.exon4;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS CDS 1049 1190 . - 1 ID=cds.g8369.t1;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS exon 496 703 . - . ID=g8369.t1.exon5;Parent=g8369.t1 NODE_2913_length_4760_cov_45.4843 AUGUSTUS CDS 496 703 . - 0 ID=cds.g8369.t1;Parent=g8369.t1 #PROT g8369.t1 g8369 MICVILVAGHGTRLEEELKADTSGSYNHLAGVPKALLPGISGKRILDLWWEVIDKRQMFADVYLVTNADKYKYFERWATASGFPTENIINDGTTTFNGRIGSVADFELVLRSKGITNSAVMVVAGDMLFYPGSFELDGVLRFFRAKKGEVAIYYELDPTESTKTRGIVEMDRNRSALISRFLEKPSETETLSRLGSVVLYCFRPESFGLLKEYMA # ORIGINAL: g3032.t1 original gene structure, not modified by PASA NODE_5558_length_803_cov_105.864_potentialcontaminant AUGUSTUS gene 1 366 . - . ID=g3032;Name=g3032.t1 NODE_5558_length_803_cov_105.864_potentialcontaminant AUGUSTUS mRNA 1 366 . - . ID=g3032.t1;Parent=g3032;Name=g3032.t1 NODE_5558_length_803_cov_105.864_potentialcontaminant AUGUSTUS exon 1 366 . - . ID=g3032.t1.exon1;Parent=g3032.t1 NODE_5558_length_803_cov_105.864_potentialcontaminant AUGUSTUS CDS 1 366 . - 0 ID=cds.g3032.t1;Parent=g3032.t1 #PROT g3032.t1 g3032 MRTNVLVWGLAIAILVATATATPRCVAPSGKPVAWWLLFKVDRGVDWFYVDYNMDIVVTLTSLNISDIRNRTTSPLALTILSITRSDKPIDYLAYSDQYASNVPKGSILEARRRIPVAFADD # PASA_UPDATE: g533.t1, single gene model update, valid-1, status:[pasa:asmbl_7551,status:12], valid-1 NODE_4700_length_1312_cov_29.2757 . gene 481 1216 . - . ID=g533;Name=g533.t1 NODE_4700_length_1312_cov_29.2757 . mRNA 481 1216 . - . ID=g533.t1;Parent=g533;Name=g533.t1 NODE_4700_length_1312_cov_29.2757 . five_prime_UTR 1198 1216 . - . ID=g533.t1.utr5p1;Parent=g533.t1 NODE_4700_length_1312_cov_29.2757 . exon 1075 1216 . - . ID=g533.t1.exon1;Parent=g533.t1 NODE_4700_length_1312_cov_29.2757 . CDS 1075 1197 . - 0 ID=cds.g533.t1;Parent=g533.t1 NODE_4700_length_1312_cov_29.2757 . exon 481 803 . - . ID=g533.t1.exon2;Parent=g533.t1 NODE_4700_length_1312_cov_29.2757 . CDS 606 803 . - 0 ID=cds.g533.t1;Parent=g533.t1 NODE_4700_length_1312_cov_29.2757 . three_prime_UTR 481 605 . - . ID=g533.t1.utr3p1;Parent=g533.t1 #PROT g533.t1 g533 MSNGFKHPYNLKSAYAQLGELPFTDFTFEFTGVIDYIWYTADRMAPSGLLGALNDDFVGKFLGCPNAHFPSDHIPLVSDMRIFPVRGLSDASAMQQQQQHHPPHRR* # PASA_UPDATE: g11911.t1, single gene model update, valid-1, status:[pasa:asmbl_4764,status:12], valid-1 NODE_2669_length_5496_cov_38.941 . gene 95 2240 . - . ID=g11911;Name=g11911.t1 NODE_2669_length_5496_cov_38.941 . mRNA 95 2240 . - . ID=g11911.t1;Parent=g11911;Name=g11911.t1 NODE_2669_length_5496_cov_38.941 . exon 1911 2240 . - . ID=g11911.t1.exon1;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . CDS 1911 2240 . - 0 ID=cds.g11911.t1;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . exon 1486 1722 . - . ID=g11911.t1.exon2;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . CDS 1486 1722 . - 0 ID=cds.g11911.t1;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . exon 1145 1195 . - . ID=g11911.t1.exon3;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . CDS 1145 1195 . - 0 ID=cds.g11911.t1;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . exon 658 859 . - . ID=g11911.t1.exon4;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . CDS 658 859 . - 0 ID=cds.g11911.t1;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . exon 95 258 . - . ID=g11911.t1.exon5;Parent=g11911.t1 NODE_2669_length_5496_cov_38.941 . CDS 95 258 . - 2 ID=cds.g11911.t1;Parent=g11911.t1;3_prime_partial=true #PROT g11911.t1 g11911 MSFNTVGGRALCVSIACIVAVLCSVQCADAFKLKTHLIVANGALNAIRNETYELNKAMYYKNVGNLTNVLIGNSNDTVELIRRLRDPVQSIAYRKLFRGGVLGPDCFPDLIGGQVWVHVNKGKGYDCDTAWNATACTRSNVTFENRPFALWRSVDYGMYQLREAKKIVNYEDRLQALAFCYGYLSHMIGDGFAHSIVNEWTRAPFEYTTGSGFYGPLTEEIKHLAVEGFLDWSMPETPQSELEIDVPIKFLNSLYISKVPTTNSSGEFAGVYFVKLLEAIKMMEDLSTSKKWEAYAPSYKDSIASFNSFFDTFGTALAYVGNVGNLQK # PASA_UPDATE: g11912.t1, single gene model update, valid-1, status:[pasa:asmbl_4763,status:12], valid-1 NODE_2669_length_5496_cov_38.941 . gene 3362 5370 . + . ID=g11912;Name=g11912.t1 NODE_2669_length_5496_cov_38.941 . mRNA 3362 5370 . + . ID=g11912.t1;Parent=g11912;Name=g11912.t1 NODE_2669_length_5496_cov_38.941 . five_prime_UTR 3362 3470 . + . ID=g11912.t1.utr5p1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . exon 3362 3735 . + . ID=g11912.t1.exon1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . CDS 3471 3735 . + 0 ID=cds.g11912.t1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . exon 3942 4183 . + . ID=g11912.t1.exon2;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . CDS 3942 4183 . + 2 ID=cds.g11912.t1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . exon 4455 4741 . + . ID=g11912.t1.exon3;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . CDS 4455 4741 . + 0 ID=cds.g11912.t1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . exon 4937 5056 . + . ID=g11912.t1.exon4;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . CDS 4937 5056 . + 1 ID=cds.g11912.t1;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . exon 5258 5370 . + . ID=g11912.t1.exon5;Parent=g11912.t1 NODE_2669_length_5496_cov_38.941 . CDS 5258 5370 . + 1 ID=cds.g11912.t1;Parent=g11912.t1;3_prime_partial=true #PROT g11912.t1 g11912 MLLPGFAVAPIAAAMGVKDIALRLLLGILTGYPLALFYRKSALFDQSPQVKHAFFATTGMIVGYYVYGWDFLHTLAAVIGTYLIITILGQTAAMVATVFVFSMGYLLVGYAYTATEEYDITYTTSLCVLTLKLIMLAWDYYDGKLPADEIEKDAKTKAAYLKQMPGLLEILGYSFFFGGYLVGPLFPYRRYSSLVFGDIHTELGGAPATASKRDEMFRSSLRYALSRLGLGLLYVLLYPLVSPYAPSSFMVTDAFMDYSFWGRMWYIWWMGKFALMKYLGVWLVTEGTCVLAGLSFDGYDKASGSPKWQGLANINVVRYETTPSLHGIIDAFNINTNAWAMR # ORIGINAL: g3712.t1 original gene structure, not modified by PASA NODE_2168_length_7436_cov_38.5829 AUGUSTUS gene 186 1148 . + . ID=g3712;Name=g3712.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS mRNA 186 1148 . + . ID=g3712.t1;Parent=g3712;Name=g3712.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 186 736 . + . ID=g3712.t1.exon1;Parent=g3712.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 186 736 . + 2 ID=cds.g3712.t1;Parent=g3712.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 930 1148 . + . ID=g3712.t1.exon2;Parent=g3712.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 930 1148 . + 0 ID=cds.g3712.t1;Parent=g3712.t1 #PROT g3712.t1 g3712 APVAQPIIVNVTVGQTARVFLNASDPDGDALLFVLVKAGTLGIADVVQPNVTSSVNSTFASNSNSTGSSNTTGTADTRPSVAYRGLIVGTDVLTLAAFDGLAYSPLFNVTVYILPAPELLDNSPSPNVTAAAPPPIVIGGGGGGSGVNLLAIILGVTLGAAVLAVPLMFLVYKRYGFEKYDAEWEKEYINAKTQVNPLYIPQTIEFSNPIYHATRLPTDIGVVSIRVDEGQLVNGRVRGVAAVDPFSSPILRTGA* # ORIGINAL: g3714.t1 original gene structure, not modified by PASA NODE_2168_length_7436_cov_38.5829 AUGUSTUS gene 6286 7308 . + . ID=g3714;Name=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS mRNA 6286 7308 . + . ID=g3714.t1;Parent=g3714;Name=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 6286 6368 . + . ID=g3714.t1.exon1;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 6286 6368 . + 0 ID=cds.g3714.t1;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 6641 6768 . + . ID=g3714.t1.exon2;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 6641 6768 . + 1 ID=cds.g3714.t1;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 6955 7079 . + . ID=g3714.t1.exon3;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 6955 7079 . + 2 ID=cds.g3714.t1;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 7213 7308 . + . ID=g3714.t1.exon4;Parent=g3714.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 7213 7308 . + 0 ID=cds.g3714.t1;Parent=g3714.t1 #PROT g3714.t1 g3714 MGDRIGEGSFVILKRDEEARLAEVRSNGNVRIGKLWFATDALVGQPFGGFYDIAGQKLVRIERSRDVMVAAVDNLQDGDPTSDNRSIVDDNRSQTLTTEAIEEMKKKGVSGKELIDKLVENSATFKTKTEFSQAKYLKKKEKK* # ORIGINAL: g3713.t1 original gene structure, not modified by PASA NODE_2168_length_7436_cov_38.5829 AUGUSTUS gene 2198 5865 . - . ID=g3713;Name=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS mRNA 2198 5865 . - . ID=g3713.t1;Parent=g3713;Name=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 5581 5865 . - . ID=g3713.t1.exon1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 5581 5865 . - 0 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 5277 5346 . - . ID=g3713.t1.exon2;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 5277 5346 . - 0 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 4972 5093 . - . ID=g3713.t1.exon3;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 4972 5093 . - 2 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 4548 4736 . - . ID=g3713.t1.exon4;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 4548 4736 . - 0 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 4258 4336 . - . ID=g3713.t1.exon5;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 4258 4336 . - 0 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 3832 3973 . - . ID=g3713.t1.exon6;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 3832 3973 . - 2 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 3471 3607 . - . ID=g3713.t1.exon7;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 3471 3607 . - 1 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 3169 3222 . - . ID=g3713.t1.exon8;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 3169 3222 . - 2 ID=cds.g3713.t1;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS exon 2198 2850 . - . ID=g3713.t1.exon9;Parent=g3713.t1 NODE_2168_length_7436_cov_38.5829 AUGUSTUS CDS 2198 2850 . - 2 ID=cds.g3713.t1;Parent=g3713.t1 #PROT g3713.t1 g3713 MESDAVAAVDNVVVVDAGGDAVARAPTDALASVPLRAKRPAEDDADAEAVEEAVKIPASTQLSKHTSATAVAARGRGKARGGGSHKNQSIGNGRRSKRPRQDLGDDDAAEVIEYVESNGLRFVKPYYYCFKTFTKGRWVKREIFEVFTKEFRSDTPEYYEAAIHSGKISVNGAVVPLTYKLQESDVIRHRVHRHEPPVIGGDIPIVSTAGDIIVVDKPSSIPVHPCGRYRHNTIVALLKRQLKLDALHTIHRLDRLTSGLLLLSAHVATAQRYSRAIQDRDVKKEYVCRVLGEFPEGEVLCEEPIAVVSHKLGLCHVSPAGKPCSTTFKRLSFNGRTSVVQCFPHTGRMHQLRVHLQYLGHPIANDPLYYRASWGPSLGRGGVDLSTVSQVMDDLFKSGIEFETENDGVDGDGDASSAETAGKSTNPPSSTQMGVMSLGNPLVGGIDASAAVVNGSVSRVGGEEAARESAGSIPGDGAGAVASTLPGDQNAANACNVIHSFTAAPSDNAASVDGRPDFPRDANCVECCANRRLPRTDELCIWLHAMRYSGPGFDFSTPLPAWAAEDFGGDIGIGSH* # PASA_UPDATE: g1639.t1, single gene model update, valid-1, status:[pasa:asmbl_1350,status:12], valid-1 NODE_1365_length_11745_cov_46.3889 . gene 8821 9469 . - . ID=g1639;Name=g1639.t1 NODE_1365_length_11745_cov_46.3889 . mRNA 8821 9469 . - . ID=g1639.t1;Parent=g1639;Name=g1639.t1 NODE_1365_length_11745_cov_46.3889 . five_prime_UTR 9431 9469 . - . ID=g1639.t1.utr5p1;Parent=g1639.t1 NODE_1365_length_11745_cov_46.3889 . exon 9329 9469 . - . ID=g1639.t1.exon1;Parent=g1639.t1 NODE_1365_length_11745_cov_46.3889 . CDS 9329 9430 . - 0 ID=cds.g1639.t1;Parent=g1639.t1 NODE_1365_length_11745_cov_46.3889 . exon 8821 9136 . - . ID=g1639.t1.exon2;Parent=g1639.t1 NODE_1365_length_11745_cov_46.3889 . CDS 8924 9136 . - 0 ID=cds.g1639.t1;Parent=g1639.t1 NODE_1365_length_11745_cov_46.3889 . three_prime_UTR 8821 8923 . - . ID=g1639.t1.utr3p1;Parent=g1639.t1 #PROT g1639.t1 g1639 MVVVISDKKAFTQAIASPQLSVVDFFATWCGPCKMIAPYLEELAAQNAGSVHFYKVDVDENEEVAADCGITAMPTFQFYKNGVKVHEIKGANKDALKDAVDKHK* # PASA_UPDATE: g1640.t1, single gene model update, valid-1, status:[pasa:asmbl_1351,status:12], valid-1 NODE_1365_length_11745_cov_46.3889 . gene 10070 11365 . - . ID=g1640;Name=g1640.t1 NODE_1365_length_11745_cov_46.3889 . mRNA 10070 11365 . - . ID=g1640.t1;Parent=g1640;Name=g1640.t1 NODE_1365_length_11745_cov_46.3889 . exon 11105 11365 . - . ID=g1640.t1.exon1;Parent=g1640.t1 NODE_1365_length_11745_cov_46.3889 . CDS 11105 11365 . - 0 ID=cds.g1640.t1;Parent=g1640.t1 NODE_1365_length_11745_cov_46.3889 . exon 10070 10576 . - . ID=g1640.t1.exon2;Parent=g1640.t1 NODE_1365_length_11745_cov_46.3889 . CDS 10205 10576 . - 0 ID=cds.g1640.t1;Parent=g1640.t1 NODE_1365_length_11745_cov_46.3889 . three_prime_UTR 10070 10204 . - . ID=g1640.t1.utr3p1;Parent=g1640.t1 #PROT g1640.t1 g1640 MALYAGGLLSDADKRKSQLEFGKYLVDVLPKYVQATQVTQSNELEVHVHPDGIVPILTFLRDHTNAQYKLLMDVAGMDVPKRKYRFEVIYNLLSVRYNTRIRVKSYTDELTPVESAFPVFKSALWFEREAWDMYGIIFSNHPDLRRILTDYGFEGHPMRKDFPLTGYVEVRYDDELKRVVAEPVELAQEFRKFDFASPWEHIQGRGNLNA* # PASA_UPDATE: g1638.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1344,status:12], valid-1 # PASA_UPDATE: g1638.t1, single gene model update, valid-1, status:[pasa:asmbl_1345,status:12],[pasa:asmbl_1346,status:12], valid-1 NODE_1365_length_11745_cov_46.3889 . gene 3878 7279 . + . ID=g1638;Name=g1638.t1 NODE_1365_length_11745_cov_46.3889 . mRNA 3878 7279 . + . ID=g1638.t1.1.5b6be70a;Parent=g1638;Name=g1638.t1 NODE_1365_length_11745_cov_46.3889 . five_prime_UTR 3878 3953 . + . ID=g1638.t1.1.5b6be70a.utr5p1;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 3878 4035 . + . ID=g1638.t1.1.5b6be70a.exon1;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 3954 4035 . + 0 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 4285 4692 . + . ID=g1638.t1.1.5b6be70a.exon2;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 4285 4692 . + 2 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 5175 5281 . + . ID=g1638.t1.1.5b6be70a.exon3;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 5175 5281 . + 2 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 5570 5661 . + . ID=g1638.t1.1.5b6be70a.exon4;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 5570 5661 . + 0 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 5917 6076 . + . ID=g1638.t1.1.5b6be70a.exon5;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 5917 6076 . + 1 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . exon 6401 7279 . + . ID=g1638.t1.1.5b6be70a.exon6;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . CDS 6401 7252 . + 0 ID=cds.g1638.t1.1.5b6be70a;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . three_prime_UTR 7253 7279 . + . ID=g1638.t1.1.5b6be70a.utr3p1;Parent=g1638.t1.1.5b6be70a NODE_1365_length_11745_cov_46.3889 . mRNA 4096 7277 . + . ID=g1638.t1;Parent=g1638;Name=g1638.t1 NODE_1365_length_11745_cov_46.3889 . five_prime_UTR 4096 4652 . + . ID=g1638.t1.utr5p1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . exon 4096 4692 . + . ID=g1638.t1.exon1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . CDS 4653 4692 . + 0 ID=cds.g1638.t1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . exon 5175 5281 . + . ID=g1638.t1.exon2;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . CDS 5175 5281 . + 2 ID=cds.g1638.t1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . exon 5570 5661 . + . ID=g1638.t1.exon3;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . CDS 5570 5661 . + 0 ID=cds.g1638.t1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . exon 5917 6076 . + . ID=g1638.t1.exon4;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . CDS 5917 6076 . + 1 ID=cds.g1638.t1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . exon 6401 7277 . + . ID=g1638.t1.exon5;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . CDS 6401 7252 . + 0 ID=cds.g1638.t1;Parent=g1638.t1 NODE_1365_length_11745_cov_46.3889 . three_prime_UTR 7253 7277 . + . ID=g1638.t1.utr3p1;Parent=g1638.t1 #PROT g1638.t1.1.5b6be70a g1638 MHQKRCITGRRPLTLLLLVSCFVGAIAADVDCGGISASLQTDIQAAYGSGGAACTRIVGNLIISGDNAACDVSSLASLSQVTAITGDFAIRDCPQLTDLSALSLIASIGGNVRIESFAAASLSGFASLKTVGGDVALSRLTGVTLITGEFMPSVTTIAGTLLIKTVPALTSISGFASLVSVGALQVMEADVLSALGGSTSLTNLQYVATSISITDNKAIGDIALKALNYSTGDLTVERNAALRSISSLGSVRWIKGSVSVSSNAALTALDGLATVEVIDADVTIDANPILTSIGAFSPLEINGRLAVRMNAQLAVISFSRTTYAGGISIVSNAAVAALDGFAAVLAVGGDVLIQSNAALASIAGFSKVVGVDGAVSVTDNARLRTLSGFVSVANVDGALVVARNPMLSSVAGFSSLSTIGGGLSIKDNSFIDSISGLYRLKRVQADQQTNIGVAIERNPLLCDDGKIQWTVILEGFLSYSKNRAACSFSVAGGTSGASTGASASSSGDSSSEDRLAWVAAGLAASTVTLLIMVVVLLVHIRKGGGVVAKGMQSVTDLELLHAQYTR* #PROT g1638.t1 g1638 MPSVTTIAGTLLIKTVPALTSISGFASLVSVGALQVMEADVLSALGGSTSLTNLQYVATSISITDNKAIGDIALKALNYSTGDLTVERNAALRSISSLGSVRWIKGSVSVSSNAALTALDGLATVEVIDADVTIDANPILTSIGAFSPLEINGRLAVRMNAQLAVISFSRTTYAGGISIVSNAAVAALDGFAAVLAVGGDVLIQSNAALASIAGFSKVVGVDGAVSVTDNARLRTLSGFVSVANVDGALVVARNPMLSSVAGFSSLSTIGGGLSIKDNSFIDSISGLYRLKRVQADQQTNIGVAIERNPLLCDDGKIQWTVILEGFLSYSKNRAACSFSVAGGTSGASTGASASSSGDSSSEDRLAWVAAGLAASTVTLLIMVVVLLVHIRKGGGVVAKGMQSVTDLELLHAQYTR* # PASA_UPDATE: g1637.t1, single gene model update, valid-1, status:[pasa:asmbl_1349,status:12], valid-1 NODE_1365_length_11745_cov_46.3889 . gene 312 3299 . - . ID=g1637;Name=g1637.t1 NODE_1365_length_11745_cov_46.3889 . mRNA 312 3299 . - . ID=g1637.t1;Parent=g1637;Name=g1637.t1 NODE_1365_length_11745_cov_46.3889 . five_prime_UTR 3213 3299 . - . ID=g1637.t1.utr5p1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 3002 3299 . - . ID=g1637.t1.exon1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 3002 3212 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 2440 2771 . - . ID=g1637.t1.exon2;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 2440 2771 . - 2 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 2239 2334 . - . ID=g1637.t1.exon3;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 2239 2334 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 1950 2057 . - . ID=g1637.t1.exon4;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 1950 2057 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 1691 1807 . - . ID=g1637.t1.exon5;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 1691 1807 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 1236 1460 . - . ID=g1637.t1.exon6;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 1236 1460 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 1002 1041 . - . ID=g1637.t1.exon7;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 1002 1041 . - 0 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 726 760 . - . ID=g1637.t1.exon8;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 726 760 . - 2 ID=cds.g1637.t1;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . exon 312 595 . - . ID=g1637.t1.exon9;Parent=g1637.t1 NODE_1365_length_11745_cov_46.3889 . CDS 312 595 . - 0 ID=cds.g1637.t1;Parent=g1637.t1;3_prime_partial=true #PROT g1637.t1 g1637 MALTGAQARSTVRRQLMFRALAVAWALVAFSACVLEVTSFPMNVPISDGSVSLTEEPLSEQEAKQPESKPDGRLWEHFSSFEYMDNVIHIDESHLEQFRACHNAYDLANGIRNGTCRISASIISAISGLSKDAVLVHLPTDAAQAANAVALKVRRISTVAIRSTDAEAVHDVEHESAQFQDVFKSVHVLFSDEMPAGPRGRRATIPSGKNNFKTFENKYVSEKDKGWFDAVVSDTLASTNPGIDTTRYMLGGAWDAFMPRFIKFGPYYDYGFSKFEFKYSLVKPVIIDIRYKVFAGAKLRIRRPSAGKETRSVIPVFPKKPKKTWEVDIPLTVFTVKLKVSAVSNNRATIDIPKNFKFDVWGAIAGSIEAGVRINTAESWIPQAVWKKNFGVGYSGMMTKLEALSVYADMRCSQELKLGVALSAAGLAKLEFEGPTFAIIPAVTFRANKDGFYLGLTVDTKISMPVPKLVRTLFALPTDYSK # ORIGINAL: g8867.t1 original gene structure, not modified by PASA NODE_3411_length_3527_cov_30.8268 AUGUSTUS gene 1292 3441 . - . ID=g8867;Name=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS mRNA 1292 3441 . - . ID=g8867.t1;Parent=g8867;Name=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 3337 3441 . - . ID=g8867.t1.exon1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 3337 3441 . - 0 ID=cds.g8867.t1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 2999 3099 . - . ID=g8867.t1.exon2;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 2999 3099 . - 0 ID=cds.g8867.t1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 2434 2586 . - . ID=g8867.t1.exon3;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 2434 2586 . - 1 ID=cds.g8867.t1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 2202 2321 . - . ID=g8867.t1.exon4;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 2202 2321 . - 1 ID=cds.g8867.t1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 1583 1870 . - . ID=g8867.t1.exon5;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 1583 1870 . - 1 ID=cds.g8867.t1;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS exon 1292 1322 . - . ID=g8867.t1.exon6;Parent=g8867.t1 NODE_3411_length_3527_cov_30.8268 AUGUSTUS CDS 1292 1322 . - 1 ID=cds.g8867.t1;Parent=g8867.t1 #PROT g8867.t1 g8867 MYDGEWRNNIRHGKGAMHWYDSSERYQGDWENGVQQGTGEHVWFPKRTAGSSHFPVCNKYVGEWQDGKRHGAGSFYFASGAQYTGEWRDNVKEGFGLYTFEDGSVYDGEFVADRMARLERPLSGNERPVPGDAKQLSGRFRLHVQPLLPQVARVDSIIAKEEEQLHNVITRHISLLRQVYRCYSALGNLGDTGTRRPSAAMAPSGAPGGANCGSTAECTQVMSRTQFWRFVKDCRLHHHRGVSLARLDRRLALYSKSITGFRTNT* # PASA_UPDATE: g8866.t1, single gene model update, valid-1, status:[pasa:asmbl_6034,status:12], valid-1 NODE_3411_length_3527_cov_30.8268 . gene 156 1239 . + . ID=g8866;Name=g8866.t1 NODE_3411_length_3527_cov_30.8268 . mRNA 156 1239 . + . ID=g8866.t1;Parent=g8866;Name=g8866.t1 NODE_3411_length_3527_cov_30.8268 . five_prime_UTR 156 157 . + . ID=g8866.t1.utr5p1;Parent=g8866.t1 NODE_3411_length_3527_cov_30.8268 . exon 156 425 . + . ID=g8866.t1.exon1;Parent=g8866.t1 NODE_3411_length_3527_cov_30.8268 . CDS 158 425 . + 0 ID=cds.g8866.t1;Parent=g8866.t1;5_prime_partial=true NODE_3411_length_3527_cov_30.8268 . exon 688 747 . + . ID=g8866.t1.exon2;Parent=g8866.t1 NODE_3411_length_3527_cov_30.8268 . CDS 688 747 . + 2 ID=cds.g8866.t1;Parent=g8866.t1 NODE_3411_length_3527_cov_30.8268 . exon 998 1239 . + . ID=g8866.t1.exon3;Parent=g8866.t1 NODE_3411_length_3527_cov_30.8268 . CDS 998 1239 . + 2 ID=cds.g8866.t1;Parent=g8866.t1 #PROT g8866.t1 g8866 DLNAFIDAFELDMINARSLMWTSYEPNMSASASMRDPLGMGMGGMGGMGAFGSGFGVMDDIEAILSGHIDDAIPVDALNDVLGAVHASTDNSLSNVMDLGRLDDGKWHSDAKDTQQRGRVGLSSGGAMEFQSRKGGDSGGGSATVVRTTDTGLLGPEASQSTARDERPRAEEANGGVWALAFISNYMYA* # PASA_UPDATE: g14251.t1, single gene model update, valid-1, status:[pasa:asmbl_9762,status:13],[pasa:asmbl_9765,status:12],[pasa:asmbl_9766,status:12], valid-1 NODE_869_length_16521_cov_38.3124 . gene 10926 16436 . - . ID=g14251;Name=g14251.t1 NODE_869_length_16521_cov_38.3124 . mRNA 10926 16436 . - . ID=g14251.t1;Parent=g14251;Name=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 16356 16436 . - . ID=g14251.t1.exon1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 16356 16436 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 16020 16160 . - . ID=g14251.t1.exon2;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 16020 16160 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 15390 15764 . - . ID=g14251.t1.exon3;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 15390 15764 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 14987 15095 . - . ID=g14251.t1.exon4;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 14987 15095 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 14599 14721 . - . ID=g14251.t1.exon5;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 14599 14721 . - 2 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 14241 14434 . - . ID=g14251.t1.exon6;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 14241 14434 . - 2 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 13891 14004 . - . ID=g14251.t1.exon7;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 13891 14004 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 13554 13673 . - . ID=g14251.t1.exon8;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 13554 13673 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 13024 13365 . - . ID=g14251.t1.exon9;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 13024 13365 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 12261 12808 . - . ID=g14251.t1.exon10;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 12261 12808 . - 0 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . exon 10926 12092 . - . ID=g14251.t1.exon11;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . CDS 11402 12092 . - 1 ID=cds.g14251.t1;Parent=g14251.t1 NODE_869_length_16521_cov_38.3124 . three_prime_UTR 10926 11401 . - . ID=g14251.t1.utr3p1;Parent=g14251.t1 #PROT g14251.t1 g14251 MSLKSDPKQYYYLNQSDCITVEHINDKAFYNEMTQAMGVVGFSKDDIDFALQMVAAILNLGNVNFTAIDDTKCKAADQNQLATASKLFNVDPATLAASLTGRTVTTREGNITTPLTVKQAEQTRDALSKAVYERIFMWIINKINDFIHAPHEQKRQVIGVLDIYGFEIFGTNGFEQFCINFCNEKLQQLFIELTLKSEQEEYQREGIDWVHIDYFNNAIICDLVEATPAGLIAVMDEQGLLQNNSDKQFLDKMMQRFKGHAHFATKQINDGTFTLKHYAGDVTYDSNGFLDKNKDTLFKDLSKAMFSSRTDRLKGLFPEGGLSDQELMKRPVTAATQFKKSVNELAASLLIKSPHYVRCIKSNEKKKGGLFDDDLCLHQIRYLGLLENVRVRRAGYAFRQLYSRFVERYKMLCPETWPKWEEPGAPARRQSRSGRRMSQAEHDLQKFINSRVLDQGFAKQGAKKILDYIKISSTAYLYGNTKLFVKSPTTLFTIEDLREKRIQLLVAKMQATFRMHVKRVAYKNLRKATIKIQVNIRRALRRIRVKKLRLCYIAWLGTHCESKAARKSLEWMTPKEKQWVKVRVDAYYRKKNEAAAVSRLRRVFRRHLARATLKAIGAAFTVAKRTGYVKGDRYTVAQWPSTKVRWVQETVFNLQLIFKRWAAGKYRSLIKPDQKEMLLAKEVASDMFLGRKTVYPASVGELFRGNMVAYETDKNIKRWQQLFGNPDEKIIYGSLVVKMDRANYKREPRVLVVTNKNVYVLDISFKVKSVIPFDALSGLSVSPYSDFIAVLHIDIKELPAKDKKKGDYIVMTETLVELVTKIARQYQFNTKFQFKFSVVDNISVSVKNAQQMIKFKVEDVEELVMEKGDHKSLIVVCPKSANKIVDAQRNAAAPSKLRPRMPSEAIPAELLGGLNEQQFHKFMETGTLPRNFDFKAIREKVGELE* # ORIGINAL: g14250.t1 original gene structure, not modified by PASA NODE_869_length_16521_cov_38.3124 AUGUSTUS gene 7223 10479 . - . ID=g14250;Name=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS mRNA 7223 10479 . - . ID=g14250.t1;Parent=g14250;Name=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS exon 10174 10479 . - . ID=g14250.t1.exon1;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS CDS 10174 10479 . - 0 ID=cds.g14250.t1;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS exon 9850 9883 . - . ID=g14250.t1.exon2;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS CDS 9850 9883 . - 0 ID=cds.g14250.t1;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS exon 8817 9624 . - . ID=g14250.t1.exon3;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS CDS 8817 9624 . - 2 ID=cds.g14250.t1;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS exon 8362 8492 . - . ID=g14250.t1.exon4;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS CDS 8362 8492 . - 1 ID=cds.g14250.t1;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS exon 7223 7956 . - . ID=g14250.t1.exon5;Parent=g14250.t1 NODE_869_length_16521_cov_38.3124 AUGUSTUS CDS 7223 7956 . - 2 ID=cds.g14250.t1;Parent=g14250.t1 #PROT g14250.t1 g14250 MRRFEVLALLACVIGVYLREPSSPSSLAPHQTDGQTPVGVIDSVGNGYHQSPPLSPGSIVDDWRGQSDAHSKQGFVVLGELVRVYVHTLPVVFCVLQAVIEGTTFGVQSLEYVGRHAVGTQRVRWTGRGIAPIASTSNTDATDGTEGGTHHNHNHNHNHNDDSGSRIHIHAESQHDLMVRLFYPAMENESDARATAVYFPGELTSGVPPDATIDALVETALGIPRGMNFVAGHVRHCTLRALEDATIARASVSAFEQLAAPNNTAPPAQRHLRCVVISHDDAEMASSHARLACELASHGFLVACVEHTDGSACVSVFPDGSAVTYRPAQGAHTVREGEERGNGQDSASASDVSKFRRAQLEQRTSEVAFVMDKLLDMDSGRDLAMFRGRLALDCGVGVFGVGLGGATALCSALYDQRVSAAVAVDLWTSTLTGEDVSRPCRAHIVLADSEHGARVPRDGETGCVGDATSPQERHALLSRLVFVTPPLRPTHTRGGLRASAATSPPFVDGHRLWMTIRGSTTANFGDLHVLLPLLCRLRGLIGSGIQTEVAESIMTTLTHRVMSTALRDIGGARVDADDVDSGFGTGASSPIAAAPREHDSIERALVMLGDAAGFRPQTARVPGTGDGVGGGGGGGDGRGGGRSGRVRIDLASLVDGRHASHVVLNRMRRV* # PASA_UPDATE: g14248.t1, single gene model update, valid-1, status:[pasa:asmbl_9761,status:12],[pasa:asmbl_9763,status:12], valid-1 NODE_869_length_16521_cov_38.3124 . gene 90 2088 . - . ID=g14248;Name=g14248.t1 NODE_869_length_16521_cov_38.3124 . mRNA 90 2088 . - . ID=g14248.t1;Parent=g14248;Name=g14248.t1 NODE_869_length_16521_cov_38.3124 . five_prime_UTR 1915 2088 . - . ID=g14248.t1.utr5p1;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . exon 1574 2088 . - . ID=g14248.t1.exon1;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . CDS 1574 1914 . - 0 ID=cds.g14248.t1;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . exon 1235 1449 . - . ID=g14248.t1.exon2;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . CDS 1235 1449 . - 1 ID=cds.g14248.t1;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . exon 813 977 . - . ID=g14248.t1.exon3;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . CDS 813 977 . - 2 ID=cds.g14248.t1;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . exon 90 443 . - . ID=g14248.t1.exon4;Parent=g14248.t1 NODE_869_length_16521_cov_38.3124 . CDS 90 443 . - 2 ID=cds.g14248.t1;Parent=g14248.t1;3_prime_partial=true #PROT g14248.t1 g14248 MTGLHFGIMELRHIGCTAVLLLVCISVHIAHTSAQNITLRGIIRDFSGFHPDFESPTSGGTEQLGLVQRTLGSDQSPLFVEFAKRVGSSLLKWPDTTTTNIARSNYGLHLFEEWYKDVPGVNLRYDVEITLTPDAANPGQYVFDSSTLPGGQFFPIDNMGYGVWEPSSGKNFWFTTEFVVPFFYKGGEVFAFSGDDDLWVFIDGNLTTCDLGSIHPRRTCQVSLDTLNLKVNGSYTMNVFHAERHTTESNFKITTTVVPQNVAPVARNLTYEVAEDSLNNAFQLQATDANRDAVVYYVVSGPSGGTLGSLQGAFTSTGALTYSPKALTYGSDRIGYVASDGKLNSTVAFVNFSVRHVN # PASA_UPDATE: g14249.t1, single gene model update, valid-1, status:[pasa:asmbl_9760,status:3], valid-1 NODE_869_length_16521_cov_38.3124 . gene 2506 6256 . + . ID=g14249;Name=g14249.t1 NODE_869_length_16521_cov_38.3124 . mRNA 2506 6256 . + . ID=g14249.t1;Parent=g14249;Name=g14249.t1 NODE_869_length_16521_cov_38.3124 . five_prime_UTR 2506 2698 . + . ID=g14249.t1.utr5p1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 2506 2768 . + . ID=g14249.t1.exon1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 2699 2768 . + 0 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 2888 3006 . + . ID=g14249.t1.exon2;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 2888 3006 . + 2 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 3137 3365 . + . ID=g14249.t1.exon3;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 3137 3365 . + 0 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 3661 3785 . + . ID=g14249.t1.exon4;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 3661 3785 . + 2 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 3975 4760 . + . ID=g14249.t1.exon5;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 3975 4760 . + 0 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 4935 5124 . + . ID=g14249.t1.exon6;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 4935 5124 . + 0 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 5399 5605 . + . ID=g14249.t1.exon7;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 5399 5605 . + 2 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . exon 5767 6256 . + . ID=g14249.t1.exon8;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . CDS 5767 5906 . + 2 ID=cds.g14249.t1;Parent=g14249.t1 NODE_869_length_16521_cov_38.3124 . three_prime_UTR 5907 6256 . + . ID=g14249.t1.utr3p1;Parent=g14249.t1 #PROT g14249.t1 g14249 MDSLSWSSKPTMMFLLVILFAPFALAVSTVNPFGAPICVNSGADNMSQFGLSVAISQTKPYTMVVGSPWSSTVRIYAQNTTTTNTSGAQGSDTFTGGWILVQSVTRTQSGSPFSKALLPLFGHSVAITADGKTIAVGAPGYGQSGASMSDWSYSGAFMLLTRASNGTYLAPSSFVQLASPKFWDRFGSRVVFSPDGAWLFVTANGGWRGASVSVSASTSTMGSTGVHVYRRNDTSGAYSLMQSIASNSLEPFGLTGVHVACGGTGNSTYIVVRDYVDDALLTLTTQQQQQNKTLEAPVQTGAVLVFSFNGTRWTREQVVTSADPRGTDQWFGVGLAAHPTQLRFAVGAPKTAKGVHLYSANATSAPTNATSTSGRWSVVHTADNVGISGRGSFFGGATVFAREGRLLLVADPTAGGQSRGVVSIYRAYNASEKLGGVDEIQRQTLAAGQRFRYDFSATLSNRFNVTLGGTAPVNDQFGASLASAADVVVVGAPAVGCVYTFAIPTIDIVSAVDTIDGAANPNITVPTPTFQPSPNRTQTPEDPSPPVQIAPSSSSNDRLALILGIVCGLLGLVLFGAGTWKYAKSRHRRQKFELMKLKDAMLESKSLVAQDGTGRAGGAPL* # ORIGINAL: g2386.t1 original gene structure, not modified by PASA NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS gene 255 1082 . - . ID=g2386;Name=g2386.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS mRNA 255 1082 . - . ID=g2386.t1;Parent=g2386;Name=g2386.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 255 1082 . - . ID=g2386.t1.exon1;Parent=g2386.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 255 1082 . - 0 ID=cds.g2386.t1;Parent=g2386.t1 #PROT g2386.t1 g2386 MGRILDIKLANPELIKVLVDVLKELVVDLNLTFKPSGIEFSEVDQGGSHAVFCTLPADKFAEYKCVPKEGMSQIVLALGLFNLQKITKTIKAKYTLYIYIEESDENLMYFKIVPDKSNNPVIMKIPIQDWAGQQGLPEILETSFHKIVKVPTSAFQEQVRNMLNITATKVEIQCTDDQLVMACNGEVISQDSVFVDDISIITNSTEDEDDPPIVQGVFPLKTIAICSKCSSMCPQVTIFLRNDMPMMLEYNVGALGTLRFIITPYTDPVAEPAAT* # PASA_UPDATE: g2387.t1, single gene model update, valid-1, status:[pasa:asmbl_3288,status:12], valid-1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . gene 7154 9295 . + . ID=g2387;Name=g2387.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . mRNA 7154 9295 . + . ID=g2387.t1;Parent=g2387;Name=g2387.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . five_prime_UTR 7154 7180 . + . ID=g2387.t1.utr5p1;Parent=g2387.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . exon 7154 9295 . + . ID=g2387.t1.exon1;Parent=g2387.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . CDS 7181 9292 . + 0 ID=cds.g2387.t1;Parent=g2387.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant . three_prime_UTR 9293 9295 . + . ID=g2387.t1.utr3p1;Parent=g2387.t1 #PROT g2387.t1 g2387 MSSRAVTDVSLLLDLSEEVLVHIIKLGRFTLTDVGHLRASCKRVCGFLDRIRDTVLNEHVVGNLSKYVGYWSWTFDRAAANGHLEVIKLLHEDEVKRGRVGIRCTDEVIRCAIKLGDWNMFVFLVRNRTELSVSQKGFYVPSHEGEYPWTNLSDEQVQFLLCEAPSFLVGLAAMDAIKGPISRGNSHLVAKLLLYVNDHFILSALIDAFLRICESPAVFEVVLAECRKRKRKERELAMAVLFKAVAQRCDGAVLLNMALQHFSLSLANLNAKERKSLTIDVPDVAVMSRLREFGLKRTVVNQWTEDLVFSVETEGATIDKVKALVSCLLREDYVAAEFVANRCRADWTSVSRDIVEKGSLDAIKWLHARGRLDTTPDFLLGRHTLTPERVDFVWPLAQTGIPHDDGDTVARLVTTQWFDVAIERGNVAMLRYLCEHLDVVGLHSNEHGTHSTNFAAATGSINVISYLIDVNSRIALVADSLAARKANAFDLQRRPFDLSWTLETAVSNGQIRLAELLVRRVPGLRLSLGTACASRRWSLFRWTLARLEATERTKALEDALLGAVRRGHIDFVNWFEDNEPDVFQRCHPKFWETMLYGHVTQFWYLFLSKHPLCVSTKLCTSENLYDILTLERRLGIAIMVRPLGVLSRDRSALQLFIDFAVPVIPPTPQQFDRLRVNNPSLCEWLTDCFAMGKFVVSTTTVKE* # ORIGINAL: g2390.t1 original gene structure, not modified by PASA NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS gene 22177 27304 . + . ID=g2390;Name=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS mRNA 22177 27304 . + . ID=g2390.t1;Parent=g2390;Name=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 22177 24526 . + . ID=g2390.t1.exon1;Parent=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 22177 24526 . + 0 ID=cds.g2390.t1;Parent=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 24761 25279 . + . ID=g2390.t1.exon2;Parent=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 24761 25279 . + 2 ID=cds.g2390.t1;Parent=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 25401 27304 . + . ID=g2390.t1.exon3;Parent=g2390.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 25401 27304 . + 2 ID=cds.g2390.t1;Parent=g2390.t1 #PROT g2390.t1 g2390 MPLLCWVSLLIPLVLWAGGIESRPPFARTLGCVDFIGTMQDWYVLYQFDLGSSFCVVLSEDAEAGRKPLCIPKMSVSTWSALSSKRSPLSQTVAQLFVRESDGKLTDTPNPNVEHIVFDSDFSQLVGDLPDGVDRLAKDFESLHGVKRMHGIAAYSIAAQEGFVIFHSNPYFPMLAPGPNGPRIVPPIESDGASAWNTGPGLSIVEQYYMCVSITSESSSSIFDALAAMNPFVTAHRVSGSYLSDLGRFTTHAQPFSESVYAAGSWRSFLECFSTAGVDPKRQCLRRYELAFGTAQLKPSKGLANNNVTILVKMRATEPSVCVSSNADGTSLTLDYSWGLRPWSSPGFMTALVGPHVARGFVCFGTLFTEQDMKTAASVCIRNEHLWNATIDAFNFVEAVCQAAPDRRNIRTVRSLEGPIVHAATRRRGVSRRWTADGSPADASSAECGMGEFCDDQRHELAFSRSMPPPHSRPRRLVPNGTADEYMKQASDAIWKGIQREFTAQDNEANAAASDADFEREYTPSCLFRQFSHRGQRERSPSLIVTRPRKGQSSSQDEEFAAIQVRWTVEHKAYVSIEVYEQADASGPQMHIATFVVDGRRNGIRSVILPEMDEGASRAFEVKHATTFQYETPLAGRSVFALHNLNSTSIFSATVTLKTKPRSVVGMMSWVSYSPPKDRALRPNERCVAGPCTYRIDRHIPNADGSLQFANVVNEHIEYRDAARQRKRATVCQGKSLCLIELETINEKCLKEFEKIAPRPPTLPDTLTSMSNLAPEAFSQEDDDRQLWLGTLTVSDDMPSIRTLINWYEFALCRRHLFNAATLADRDRGAILWKLFPTTMTEAVRTNRYVPVCHRYMPGHAYSFSIGDQLRSVTFAPESMGQRMLDRELCNDIVGHRTPYSLPDGNDAGLYLTLYDLDNKAPVVSAYTFTLGGSRKDYVHSMRTYAASTHGFMINYVMSGWAAADRSDGALLNCNTWGVGIFGRGYLVEVNSEKEKSLTNSLMRLDKDFLSFQTHKHRGHLNPSHINTIYRSSSAASQSRRDLATFTFLNIIPHSKSCNSQWGRDEHRIADALLRVTEALHIDGKDADETVYLMTGPNWVFRRGATIWTELCAPSVFGAFRIERQSGGECDYVPDVLSEAVVLADCHAVYENMLTPPVLPVRGRRPVVQQDTLLVKQLKRYREIVSKTLRNVKLDETDALLDDDIVKKPPPSHPCSDVLSAQRCEAQQGCVWDRVVKRGFCRPEHRCDEFDTDWDTCTSHACSFHVSAGQCRPFFGGEASHRAAVTLAPFHGYSRRGNRPSSLESNLDTLVTKLGKLRGVTKTGVADLPDSFQTRAKLRASILSNFVSTGFSWLCLAGSDTQSDAIRTLCQSLRTEKRKVCYPVLGTESSSSCTSQTAAAEALDLLHYEFIPVAVDRLRDDNTKLLIDIVEKLNSVLTEIVDESAQLQAMGVLATVADGASTVNAVPAAVHGANVGRDVMPDPLDVGVMDSADNEQDVGPPEVEDDDAMDLALGDSIIDDAKDEVAPPNSAVPNVETTDADMGAGSSKRKREDAYHPPQRLSPPLEMLFSLFKSSFCRCLLVLLGEENNQ* # ORIGINAL: g2388.t1 original gene structure, not modified by PASA NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS gene 9370 14441 . - . ID=g2388;Name=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS mRNA 9370 14441 . - . ID=g2388.t1;Parent=g2388;Name=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 14219 14441 . - . ID=g2388.t1.exon1;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 14219 14441 . - 0 ID=cds.g2388.t1;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 12137 13945 . - . ID=g2388.t1.exon2;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 12137 13945 . - 2 ID=cds.g2388.t1;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 11987 12058 . - . ID=g2388.t1.exon3;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 11987 12058 . - 2 ID=cds.g2388.t1;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 9370 11234 . - . ID=g2388.t1.exon4;Parent=g2388.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 9370 11234 . - 2 ID=cds.g2388.t1;Parent=g2388.t1 #PROT g2388.t1 g2388 MRACRGVSVTVIVKAFASAYTKDDHVYVDVLGSKTPGAVLSNVLDATPLLSARVLRIVIVNDDTVDLPSVTVTRSPNGPRIVPPTDSAGANAWNTGPGLSIVEQYYMCVSITSASSSSIFDALAAMNPFVTAHRVSGSYLSELGRFATHLQPFSGSVYAAGSWPSFLECFGTAGVDPKRQCLRRYQLTFGTAQPKPQKDFANTNLTILVKMRAAEPSVCVSSNADGSLLTLDYSWGLRPWSSPGFMTALVGPHVARGFVCFGTLFTEQGIRTAAAVCIRNQHLWNATLDAFNFVEAVCQAAPDRRNVRTVQSLEGPVVHAAARRREASRRWVADGGLPGKEAGAGCGAGEFCDDQRRELAFSRSMAPPSAKPNPSVQDDMDDKWIAKLKRTSDDTWNDMFLDFKQRETLAKAAEGDVDFEREYTPSCLFRQFSHLSRHDRSPTLISTRPRTGQSLSQDVEFASIQVRWTVEHKAYASIEVYEQVEGIGPQTHIATFIIDGRKNGILSVMVPGMDEEASRAFEVKHATTFQFETPRASRSVFALHNLNSTSVFSATVTLKTKPRSIIGQMMVSHSPPKDRSLRPNERCVAGPCTYRIDRHIPNADGLLQFADMVNEHIEYRDAARLRKRARVCKGTSLCVVELETMDEECLEEFEKMMPRPPAIHDTVISMAPEEEKKELERRELSEDVDSSVERTARTPKDLLSGWAAADREAANREAGDSAAMEKADVDVLDCEVTGGGVGIFGRGYLIEANQKKEWSLKNSLMLLDKDFRDKFGDKHDRGHLNPNYINTLHRKSDVDSHGYIQSKRDLATFTFLNIIPHFSSCNTAWGHDEHRIAEALLRVTEALPRPRRSNGKTSPDVIVYLMTGTRTISPNMRTIWTEFCAPSLFGAFRIERMNNQACKYVPDTVLFTTAVVLEACHREYTTLLEDGNVVDAYRNIVSKTLRKQKVGAGLKGVVEEQKPPIHDCSRILHKHYCETDSECAWDLFGKPAFCRQRYRCDGFNDKRDECISNVCSFHKVAGHATRGHCRPFFGGAASAGSVVVLGAVRALPRFGSKVNSNLDALMKTVMERMKDSIFVLPRSIVSRADLRTTILRLFVGTAVMWLCSDGLHIQPALPELTTACASLAQLKKCYPRLGTALKNVCSARSMRSTSSAVPTARLALERIREGFFGVVLQHPVYKKDIPSLVDLVERLDPSEDVLDNFEANYASIPKANVDDSESADASIASAPNLAVRDTGSNQVANAKKRKAERAESDERSTKPRFLGGNQVTYTKKRKAELAESDGRSTKTLLLDPTLEPTERLFREFESSFCSCLLVVFED* # ORIGINAL: g2391.t1 original gene structure, not modified by PASA NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS gene 27358 29490 . - . ID=g2391;Name=g2391.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS mRNA 27358 29490 . - . ID=g2391.t1;Parent=g2391;Name=g2391.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 27358 29490 . - . ID=g2391.t1.exon1;Parent=g2391.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 27358 29490 . - 0 ID=cds.g2391.t1;Parent=g2391.t1 #PROT g2391.t1 g2391 MSSQAVKDVSLLLDLSEEVLVHVVKMGCFTITDVGHLRATCKRVCGFLDRIRDTVLNEFVVGNLSKYVPYWSWTFDRAAANGHLEVIELLHEDEVKRGRVGIRCTGEAIRCAIKRGDWNVFVFLVRNRKELSVSQKDFYVFFTSGKRGHPWTNLSDEQAQFLLYEAPSFLDGYAVADAIMGPINRGNVDLVSKLLGHISDDYIFSALADAFLRIRETPAVFEVVVAECRKRNLEERELAMSVLFEAVVQSSDGTALLDIALRYFSFSLAELDAEERDSLTFGVTDMAVMSRLREVGLKRAVVHRWTEDLVFSVETEGATIASGSSLEAVLLSCLLREDFAAAEFLADRGGVSWSNISREMVESGSVATLKWLHARGRLDTTPEYLLTGHMLTPERVDFLWPLARIGRPQVRGQTVTGKAIRRWFDIVIEQGNIAMLRYLCEHLDVVGFYAAEKFPTGSADLAAHKGHVDIISYMIDVNSRIAPVSDSAAAQRTNAFDLQRRPFDFSEALEAAVLYGHFRVAQLLIRRVPRLRLSLETACASRRWSLFRWALARVETAGRQRVLEDVFMGAMRRGHIEFVDWFEENEPDVFERCHPQFWEMLQQVSNTHFWHAFLSKYPTCVSTKLFISENCLYDILTLERRLGIAIMHRPLGVLRRDKSDLQLFIDFAIPVKPPTPEQFDKMHAENPLRWQWLTDCFAAGKFVVASTANK* # ORIGINAL: g2389.t1 original gene structure, not modified by PASA NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS gene 14567 20655 . + . ID=g2389;Name=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS mRNA 14567 20655 . + . ID=g2389.t1;Parent=g2389;Name=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 14567 15074 . + . ID=g2389.t1.exon1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 14567 15074 . + 0 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 15165 17028 . + . ID=g2389.t1.exon2;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 15165 17028 . + 2 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 17114 17394 . + . ID=g2389.t1.exon3;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 17114 17394 . + 1 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 18141 18217 . + . ID=g2389.t1.exon4;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 18141 18217 . + 2 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 18319 18592 . + . ID=g2389.t1.exon5;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 18319 18592 . + 0 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 18845 19810 . + . ID=g2389.t1.exon6;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 18845 19810 . + 2 ID=cds.g2389.t1;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS exon 20117 20655 . + . ID=g2389.t1.exon7;Parent=g2389.t1 NODE_201_length_31957_cov_22.2904_potentialcontaminant AUGUSTUS CDS 20117 20655 . + 2 ID=cds.g2389.t1;Parent=g2389.t1 #PROT g2389.t1 g2389 MCHMVAAFDVAQVGVTVSDGEYLSIKSAAFSLPFMRASDSDVNDTLPSTILLHEYTGLIGNQLGSDLHGDVAAAIQQDVANLMGDRICELARDDKRGVFACDIAETSDPLSNMIKAWMAGDQPRAVFSPATFRQNERVDIPIGATASTPVLWTSPGDMMSKLILTIVFEVYHWEPVDDWAPDCGPLQANQTRTVHCVNQKKSAVAQHNCAPLKRLPNIRTCDISPSFAWQTGCRCPCNSSTCDTLNDVPAVMCINVRSNVTVDENLCVASSKPDDQKCGTTCTCDDGCVGRWSTGHLGDCVRDGGSPMLSFYKEVVVTCDLVKDTKVLFANVDATRCLDPLPLRRVPCTPVDVLGGNEKIWDELQESRRVEIFAGRLSSEVEVQLGVPAMLAKKRYADAVADIAESHVRELAANASAALDTPRMEAEAAFYAAKTEALRQSETLRKGLVEQSIDAEVEEAVTRKLQALAARVDPIAGKTVSGIELLGIGLDMVRAYGLSPSDLFGTTEIIPILDLSYSNMDFIGDKFVPDNVYAVSLPIATFTSDLTILTSRSEIQNSMKNSYKLSTDEKENEGVASEEFSFHLNVDFATESETIESSKDVFVRNTVTATTSRANFVRNFASLKLSDVLVSYWKNASASNDCCQSAGTSGCSTKCATLDDMPGQFGTHVIFGISMGCIAMQEMRLDIAEFSKLVSMESDVETGSTQRETVGMGGPTDLQSSSTSETATVALKQAMQRTSSTASTKITEKYLGGVPQSGSFFEDDMVNNDALKTYISTCAEKPFPVNYVVMRTHELIEKMGATAFGESQSVFDEKLKKARQVFRDYCAGIPDCAPDLGDEDRVDPIQFGDLVRIMYVQSGSIHWLSTSTPTPLSVGQIYLSDDISGNFSKDLALVRITHPLEEHLSLADNKLRYGKSFVLSTNAGCINETSSATSTSTIGNVQNIRSAVGSSCLTFRFMSKSRVIGSEVSYDDQVFIQPITSFSRNPANFVFNKPPSLFLAPVSPESGNTQVSIVSGNDPKRSAQSVSWSVSRATSMSIMQTIGEGTTAEYTISSATATIDASLLKGTIVVTFSVPVRRRSIPPALNRMATAAARASTDAYARQLLSSDFALSVSRANGAHENIARVRFAPGLQTEDTYVLLVSFSSFVSVLDVVYVSLSNQSNIVGMKGQIGAPSTMSPVAAEIVLPLSLEAMLSCHYFNDTTKNVTVIGRLLFSQPVMTKEKETVLESDFVVYNGNKIASYNIVVHAHEPGQQMAVDTGSEEDSITPATSSSFSFSLSIPKDVDLSSITVGVVAGRLSTLSLSLFPSTAHASLMDIASQPLKVCIMDNDWYSNDKDEPLPSPPTDPPKVPVDPTDKMPTVIVSAQMVNDIVTARTAKLEARTNSWGSAATLGAVMGGLSIAVLIFVGILAYRHRIAIQRMIRRETGRRFYVGDDAVNIQENAMYVHEAFNELHGMTERQQHEGQQQAGDGPDNAGLANANVNDPDAGAGALDANVVDADGL* # ORIGINAL: g6695.t1 original gene structure, not modified by PASA NODE_8405_length_372_cov_27.8855 AUGUSTUS gene 121 273 . + . ID=g6695;Name=g6695.t1 NODE_8405_length_372_cov_27.8855 AUGUSTUS mRNA 121 273 . + . ID=g6695.t1;Parent=g6695;Name=g6695.t1 NODE_8405_length_372_cov_27.8855 AUGUSTUS exon 121 273 . + . ID=g6695.t1.exon1;Parent=g6695.t1 NODE_8405_length_372_cov_27.8855 AUGUSTUS CDS 121 273 . + 0 ID=cds.g6695.t1;Parent=g6695.t1 #PROT g6695.t1 g6695 AVYHMTTDKDDAAKSVPLALQHVFYDLQHSDAAVGTTQLTKVGQKALQFS* # PASA_UPDATE: g2972.t1, single gene model update, valid-1, status:[pasa:asmbl_8486,status:12], valid-1 NODE_6136_length_632_cov_80.4955_potentialcontaminant . gene 1 632 . - . ID=g2972;Name=g2972.t1 NODE_6136_length_632_cov_80.4955_potentialcontaminant . mRNA 1 632 . - . ID=g2972.t1;Parent=g2972;Name=g2972.t1 NODE_6136_length_632_cov_80.4955_potentialcontaminant . five_prime_UTR 605 632 . - . ID=g2972.t1.utr5p1;Parent=g2972.t1 NODE_6136_length_632_cov_80.4955_potentialcontaminant . exon 1 632 . - . ID=g2972.t1.exon1;Parent=g2972.t1 NODE_6136_length_632_cov_80.4955_potentialcontaminant . CDS 1 604 . - 0 ID=cds.g2972.t1;Parent=g2972.t1;3_prime_partial=true #PROT g2972.t1 g2972 MGFALTVTYPAVNSPAFGRITINVDSYWGSTTSASNVSVTPNVYTCTGSASVITCTQTAPANLLTVTLTIPYSSPPSNAPLTRKQAAFSATLGFADARTYYDPSAGNNAVSTTVPVVAEVQMAIVLVDPFDPAKDFNPYIEATPAKPNITSETELVMRPFVVVNNHPSNTAFSVSLTITLRTGLSYREGSALIVNPPSSTA # PASA_UPDATE: g12718.t1, single gene model update, valid-1, status:[pasa:asmbl_6751,status:12], valid-1 NODE_3942_length_2482_cov_46.4209 . gene 13 295 . - . ID=g12718;Name=g12718.t1 NODE_3942_length_2482_cov_46.4209 . mRNA 13 295 . - . ID=g12718.t1;Parent=g12718;Name=g12718.t1 NODE_3942_length_2482_cov_46.4209 . five_prime_UTR 247 295 . - . ID=g12718.t1.utr5p1;Parent=g12718.t1 NODE_3942_length_2482_cov_46.4209 . exon 13 295 . - . ID=g12718.t1.exon1;Parent=g12718.t1 NODE_3942_length_2482_cov_46.4209 . CDS 13 246 . - 0 ID=cds.g12718.t1;Parent=g12718.t1;3_prime_partial=true #PROT g12718.t1 g12718 MSSVGGGGSLLTADNIVDGHEEDNNVDDPDEELSAFERALVDAKTGLFGVLFIIAKQVEQNSLFVIIEIIIDFLQVLS # PASA_UPDATE: g12660.t1, single gene model update, valid-1, status:[pasa:asmbl_7885,status:12], valid-1 NODE_512_length_22083_cov_46.5506 . gene 12542 13902 . + . ID=g12660;Name=g12660.t1 NODE_512_length_22083_cov_46.5506 . mRNA 12542 13902 . + . ID=g12660.t1;Parent=g12660;Name=g12660.t1 NODE_512_length_22083_cov_46.5506 . five_prime_UTR 12542 12567 . + . ID=g12660.t1.utr5p1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 12542 12669 . + . ID=g12660.t1.exon1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 12568 12669 . + 0 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 12771 12878 . + . ID=g12660.t1.exon2;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 12771 12878 . + 0 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 13005 13074 . + . ID=g12660.t1.exon3;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 13005 13074 . + 0 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 13207 13274 . + . ID=g12660.t1.exon4;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 13207 13274 . + 2 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 13450 13564 . + . ID=g12660.t1.exon5;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 13450 13564 . + 0 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . exon 13739 13902 . + . ID=g12660.t1.exon6;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . CDS 13739 13812 . + 2 ID=cds.g12660.t1;Parent=g12660.t1 NODE_512_length_22083_cov_46.5506 . three_prime_UTR 13813 13902 . + . ID=g12660.t1.utr3p1;Parent=g12660.t1 #PROT g12660.t1 g12660 MVLSEFLTCQALFVLYAVVFAQVIARVSGPLGVKVATAWALRNNPAAREEKECRAAVFKLQQDLVKINAQDEFARYARTQRSLNEKTAELKRLKLASSTVVSGATSSVGYATKILSYAVLGAVILSCRWTPVARFPTDFFAPFSWLIALPSMPSGTLSGVIWLVICRRVTANAIAAVP* # PASA_UPDATE: g12662.t1, single gene model update, valid-1, status:[pasa:asmbl_7881,status:3], valid-1 NODE_512_length_22083_cov_46.5506 . gene 17570 21200 . - . ID=g12662;Name=g12662.t1 NODE_512_length_22083_cov_46.5506 . mRNA 17570 21200 . - . ID=g12662.t1;Parent=g12662;Name=g12662.t1 NODE_512_length_22083_cov_46.5506 . five_prime_UTR 21064 21200 . - . ID=g12662.t1.utr5p1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 20994 21200 . - . ID=g12662.t1.exon1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 20994 21063 . - 0 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 20837 20910 . - . ID=g12662.t1.exon2;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 20837 20910 . - 2 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 20316 20733 . - . ID=g12662.t1.exon3;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 20316 20733 . - 0 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 20095 20169 . - . ID=g12662.t1.exon4;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 20095 20169 . - 2 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 19805 19992 . - . ID=g12662.t1.exon5;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 19805 19992 . - 2 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 19567 19708 . - . ID=g12662.t1.exon6;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 19567 19708 . - 0 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 19155 19417 . - . ID=g12662.t1.exon7;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 19155 19417 . - 2 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 18884 19047 . - . ID=g12662.t1.exon8;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 18884 19047 . - 0 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 18378 18774 . - . ID=g12662.t1.exon9;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 18378 18774 . - 1 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 18156 18253 . - . ID=g12662.t1.exon10;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 18156 18253 . - 0 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . exon 17570 18029 . - . ID=g12662.t1.exon11;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . CDS 17777 18029 . - 1 ID=cds.g12662.t1;Parent=g12662.t1 NODE_512_length_22083_cov_46.5506 . three_prime_UTR 17570 17776 . - . ID=g12662.t1.utr3p1;Parent=g12662.t1 #PROT g12662.t1 g12662 MAPPGDSIAKPRHILVLYTGGTIGMKPSERGYVPAQNYLGHYLYENSQFHDKAYSFAPTDLERAKAVSPRGSHGEELPRLAKRKGANSNGGSPTTARADKTADKRPMPATDASDAAKRKPLMKRSDTLPSIATVATPSSSQAQPNDGKRAVGKSVADEGPVVRTFACPMSRFGKRVLYDLKEFPELLDSSNMTMEDWIKIGSELAQYYDYYDGFVVLHGTDTMAYSASALSFVFENLSKTIILTGSQVPLTQPQSDGIDNFLGALCIAGHFDIPEVCLYFHNHLFRGNRTKKIDASSLDAFGSGGFPPLASVGIDIDVNWDIVRTPGQPGRICTHMTFDQNIGALLIFPGITTEAIRNFLRPPMRGVVLLTYGAGNAPDRNKDLLDVLKQASASGIVLVNCTQCPRGMVEGHYATGRALYDAGVVAGFDMTVECALAKMSYLLGRYGADPECPRIIRRLMSESLRGELRAPEVEMRFSFRDKHFVSKVANALAESFRNTNSTDATIRKVEAALAPVLACSAASFGDVKELENLHRGGVDLNAGDYDGRTAMMLSACGGHVDVVKYLLDIGCDPNSQDRWGGTALSDALKHEHDAVVQVLRERGARLVPGDELTDKLCSLAAKGDAMGMEKLLANGALANSCAHDQRTPLHISAAEGHAECVKVLLRHSAFPLARDRWGVTPIEEAKAGGHTDIVRALKKAATTATAGQIQKPE* # PASA_UPDATE: g12659.t1, single gene model update, valid-1, status:[pasa:asmbl_7880,status:3], valid-1 NODE_512_length_22083_cov_46.5506 . gene 11001 12208 . - . ID=g12659;Name=g12659.t1 NODE_512_length_22083_cov_46.5506 . mRNA 11001 12208 . - . ID=g12659.t1;Parent=g12659;Name=g12659.t1 NODE_512_length_22083_cov_46.5506 . five_prime_UTR 12161 12208 . - . ID=g12659.t1.utr5p1;Parent=g12659.t1 NODE_512_length_22083_cov_46.5506 . exon 11489 12208 . - . ID=g12659.t1.exon1;Parent=g12659.t1 NODE_512_length_22083_cov_46.5506 . CDS 11489 12160 . - 0 ID=cds.g12659.t1;Parent=g12659.t1 NODE_512_length_22083_cov_46.5506 . exon 11001 11303 . - . ID=g12659.t1.exon2;Parent=g12659.t1 NODE_512_length_22083_cov_46.5506 . CDS 11058 11303 . - 0 ID=cds.g12659.t1;Parent=g12659.t1 NODE_512_length_22083_cov_46.5506 . three_prime_UTR 11001 11057 . - . ID=g12659.t1.utr3p1;Parent=g12659.t1 #PROT g12659.t1 g12659 MFGTIFGAIALVIFILRTYVEEFFRLVCAKRKSVSSDIVLVTGAGSGIGRLTALGFARHGATVVLWDINGEAVRRVADEVRASGKGRAVHYQVDLSRREDVYAVAAAVKRDVGDVTILVNNAGIVTGKPFLDSPDHLIEKTFQVNTVSHFWTVKAFLPAMLARNRGHVVTVASSAGTVGVARLIDYCSSKFGAVGFDEALRMELSKHGKTGVKTTVVCPYFIRTGMFDGASTRFPLILPFLEPEYVADKIVDAVRTNQAILMLPRILYVMPFLRGILPTRAFDAAVHFLGANDTMDDFKGRGHHH* # ORIGINAL: g12655.t1 original gene structure, not modified by PASA NODE_512_length_22083_cov_46.5506 AUGUSTUS gene 208 1022 . + . ID=g12655;Name=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS mRNA 208 1022 . + . ID=g12655.t1;Parent=g12655;Name=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 208 303 . + . ID=g12655.t1.exon1;Parent=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 208 303 . + 1 ID=cds.g12655.t1;Parent=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 422 539 . + . ID=g12655.t1.exon2;Parent=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 422 539 . + 1 ID=cds.g12655.t1;Parent=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 840 1022 . + . ID=g12655.t1.exon3;Parent=g12655.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 840 1022 . + 0 ID=cds.g12655.t1;Parent=g12655.t1 #PROT g12655.t1 g12655 ARTFQVVKCSLCTDPLDPPSIHFFCQHSFHIRCVGDNEKVCPLCLGENQKILDMIRAQEQTADQQEKFFKQLEGAPDGFRVVAEHFGRGALHIRGAIPVLGLQPQSQPPPQAQLGAPMGGLGQSPAVARRA* # ORIGINAL: g12661.t1 original gene structure, not modified by PASA NODE_512_length_22083_cov_46.5506 AUGUSTUS gene 13949 17267 . - . ID=g12661;Name=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS mRNA 13949 17267 . - . ID=g12661.t1;Parent=g12661;Name=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 16800 17267 . - . ID=g12661.t1.exon1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 16800 17267 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 16172 16633 . - . ID=g12661.t1.exon2;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 16172 16633 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 15642 15975 . - . ID=g12661.t1.exon3;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 15642 15975 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 15416 15526 . - . ID=g12661.t1.exon4;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 15416 15526 . - 2 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 15249 15307 . - . ID=g12661.t1.exon5;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 15249 15307 . - 2 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 15056 15097 . - . ID=g12661.t1.exon6;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 15056 15097 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 14794 14952 . - . ID=g12661.t1.exon7;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 14794 14952 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 14540 14590 . - . ID=g12661.t1.exon8;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 14540 14590 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 13949 14422 . - . ID=g12661.t1.exon9;Parent=g12661.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 13949 14422 . - 0 ID=cds.g12661.t1;Parent=g12661.t1 #PROT g12661.t1 g12661 MSREIEVSVGTDFNFVGTIDKNLLCPICSDPLSDPVETHCGHTYCLLCICEWIRRNATCCLDKAPLRPDDLRPVNKIITSQLNELPVQCVRCDGKFLWQQIKDHVRTQCALTPIPCGHPGCGRSLPRSAVEEHRLQCAHRVVSHTCGMPVSIMDMEEHCASECLDADVPCIHASFGCDWRGLRRDISAHCSTCRFEGVKDVLRAQQETIARLQSKECAVDAAASGASIAQRRRSVASEKAADAKAMDADDDKENIRNGVALSEPKEAKEAHASGPLVEPDAPADLVSGLYWDYYEGTFTWLPDFEQLTPTSRGQCDGISVGELFKKGVLNAPVNTDLYQTGDFAVRFRGFIEVPFDGEYTLYASSNDGSRVWIGGKLIVDNDGCHYKQEVEGSVRLARGRHSISVGYFHKNGKVLEGGLRTGIHLKVFYYYAGTNYWGRNRVNKQRIPNHSFYRPLLDDKIKSLKEFKAEDEEIPYDPAHVESERLKAAEKVERDEARAASVVQTGRVVDLERQLQSVKAVAMSMEIALRHAQKDRHSALSETHKMQARTMDLEETLADLKERYFAAVALNIKVQMSGAAETERRRSTKAKPAPPARHFNVNISDMYDLAVARSLALEEWPRHIAACLMADSVMPPQTPGPRGPRASSAKTPGTAAHGDGGMMTRSRMCRIPGSPSSGARRGDLASSSSNAAFAASYVPPVQFALSTSAKTVQYQSAAF* # ORIGINAL: g12656.t1 original gene structure, not modified by PASA NODE_512_length_22083_cov_46.5506 AUGUSTUS gene 1198 4066 . - . ID=g12656;Name=g12656.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS mRNA 1198 4066 . - . ID=g12656.t1;Parent=g12656;Name=g12656.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 3621 4066 . - . ID=g12656.t1.exon1;Parent=g12656.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 3621 4066 . - 0 ID=cds.g12656.t1;Parent=g12656.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 1198 3487 . - . ID=g12656.t1.exon2;Parent=g12656.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 1198 3487 . - 1 ID=cds.g12656.t1;Parent=g12656.t1 #PROT g12656.t1 g12656 MRARCVDGGDGVGSRAGLSREAELRPLVDWDPCEGVGHVCGTGAAVRAGGAEMYTPAHTHSTGGGLNDDDSDAPLLSDSRQGYDAAEYTSAVASVGTVDAADQNGTYVDAVLQAAVFVDDAIHNRSVRHRVDRRSLEIYRMYYSVGAQWAVFAGICTLLLLSFFEYPSSVLAPRAVTGTIEGVCVAILACDIGTRWRVLGRSAFTASRWNVCYVAVLVVTVVDFVVSLALPEGRYFVVRRLLRPFFLAQSSALLKKTLKNVLRCVPEILSVLSLLALHLFVFAALGCMLFHGTEEGAQYFDSLRRALVTMFVLLTTANHPDVMMPAYTESRWYALFFVIFLLVGLYCVMNVLTAIIYNQFRGYLVGSMQASYFRRKVAMRGAYEVLRLHARPISLARDDAPTVRAGDGGVPIAVVLRFVAALDASAACKAPLLESLHSCEQGAGRGAHAVTLGLVEFLALITPVVQRRQASSPPLSNSTPWFVFGRRLPMLSSIRRIMLNPWYNRTVNVVIVAGAFLAAAEISRDGGESIHEWERAANVALSFLYFVETVVRAYALGPRSLVRGVWMFVDSGLVLAGFCASAATLARRGVSPESAWDLSRTECLLLLLRVVRLVPTTPRFHAMAVTIGHLLRSMSTFAGMLVIMYYEFALIGIGVFSGHVREDNAALNGTDFAKLNYWPNTFDTFSSSIVVLWDLMVVNNWYVIMEGHVAATSEWSRLFFISWYLVSVVVATNLLVALILEAFIQRWETLREDKAPSQAATHPATHLRAVSQQPGVGQTQFGAGPSWIQSQTSLTDVVAAAPLHPLPLTGLRSHSESPAALADANGVATPDSEVSAADVLVRGTALEDIFGANLKEPTEDEILEALGIGATDVVDSHSRLVSVAQNGDLGIDGALDVPSLDRHGSSLSLNM* # PASA_UPDATE: g12658.t1, single gene model update, valid-1, status:[pasa:asmbl_7884,status:3], valid-1 NODE_512_length_22083_cov_46.5506 . gene 7228 10970 . + . ID=g12658;Name=g12658.t1 NODE_512_length_22083_cov_46.5506 . mRNA 7228 10970 . + . ID=g12658.t1;Parent=g12658;Name=g12658.t1 NODE_512_length_22083_cov_46.5506 . five_prime_UTR 7228 7393 . + . ID=g12658.t1.utr5p1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 7228 7472 . + . ID=g12658.t1.exon1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 7394 7472 . + 0 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 7707 8278 . + . ID=g12658.t1.exon2;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 7707 8278 . + 2 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 8643 8843 . + . ID=g12658.t1.exon3;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 8643 8843 . + 0 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 9114 9836 . + . ID=g12658.t1.exon4;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 9114 9836 . + 0 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 9980 10128 . + . ID=g12658.t1.exon5;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 9980 10128 . + 0 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . exon 10280 10970 . + . ID=g12658.t1.exon6;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . CDS 10280 10709 . + 1 ID=cds.g12658.t1;Parent=g12658.t1 NODE_512_length_22083_cov_46.5506 . three_prime_UTR 10710 10970 . + . ID=g12658.t1.utr3p1;Parent=g12658.t1 #PROT g12658.t1 g12658 MHRLLASASRAAIARPALRASIHTQKALNSTAAAPAPADIEVFVDGKPVRVPPGTTIIQACESMNVEIPRFCYHERLSIAGNCRMCLVEVEKTPKPVASCAMPVMPGMRIKTDSPMVKKAREGVMEMLLVNHPLDCPICDQGGECDLQDQSMVFGSDKGRFTDNNYAGKRAVEDKNIGPLVKTSMNRCIHCTRCVRFGSEVAGVDELGTTGRGGDMQIGTYVEKMFKSELSGNVIDLCPVGALTSKPYAFTARPWELRNTESIDVMDAVGASIRIDTRFGEVMRVIPRPNDDVNEEWLADKGRFAYDGLKRQRLVTPMVRRNDRLAPVSWEEALNVVADKLLSIKGGEMAAVAGAFADAESLVALKDLFNRLNSENLHTEEQFPTAGAGTDFRSAYIMNSGIAGAEEADVMLVVGSNPRFEAPLFNARMRKGVRGNEMRVGLVGSKVDLALDYEHLGDTAAVLAEIAAGAHPWSRVLQTARRPMIVVGASALQGEGGASLFAAAAKITAGLAPQAGWKSLNVLQRAAGQVAALDIGYRPTAVAGEPKLLYLLNADETVSPRAGSFVVYQGHHGDRGAHIADVILPGAAYTEKFGTYVNTEGRSQSTKRAVTPPSLAREDWKVVRALSEIAGHKLPYNDIASVRARLSEVAPHLTRYNTVQPAGFSRLVASMAQEAAGSKPATTQLRPPQIALADYYMTDPITRASKTMAKCVQAATA* # ORIGINAL: g12657.t1 original gene structure, not modified by PASA NODE_512_length_22083_cov_46.5506 AUGUSTUS gene 4556 7274 . - . ID=g12657;Name=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS mRNA 4556 7274 . - . ID=g12657.t1;Parent=g12657;Name=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 7225 7274 . - . ID=g12657.t1.exon1;Parent=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 7225 7274 . - 0 ID=cds.g12657.t1;Parent=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 5214 6885 . - . ID=g12657.t1.exon2;Parent=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 5214 6885 . - 1 ID=cds.g12657.t1;Parent=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS exon 4556 4945 . - . ID=g12657.t1.exon3;Parent=g12657.t1 NODE_512_length_22083_cov_46.5506 AUGUSTUS CDS 4556 4945 . - 0 ID=cds.g12657.t1;Parent=g12657.t1 #PROT g12657.t1 g12657 MVTAADDVRTVGTRNVRIDRQRTAVVRCTCRGAWRRGATCALLILGVLWTAQHTAWLGRERVEDARPAHPSHPAADATSHLTQDEYVGRGENALLLSHNSRVQSGERHIVDDVSTVVPIQPETMDAWTRCAPNSAYLLRNPLLSGNNCTNFDAEAVKLERSFSALTVSFRITSDGRPTPGLLILGELKCVVNCTWGQPPTNPDATRSQRHMPARATARVFAQGHDACDGSYVLRFVGLEYMHASPNGRWDVSARVNYANYEHFATPGPNCTRRFPGISDFSIPDADTQRCSSVFKKFPLGLVVLCESVAISLDSALDGDRPSSEFPTTTTRGTSTPPDNMYNRRPHIVDTNSPAVTNEDAPICAGGNDHPGRWVVRPQGMPDPRLCRADAGSRGEQSTPAQSLGWTVDDTYVWCPWSCRLRTFDAEDFRSCFERKRLRRVLFIGDSRTRQLFRSLRSHLMADRNESDNIDASKKCRRNADTSCENLFIAHNTTFELLFTYGLYAQLDPPHVPPPCKHEFLNYTKYFSTRRGLQLDRGLDVVRDKFGGRGALSSEAIAAGAYDAVVFSEGLHALQPLLSDDDVDELVRAAIGLILEADVRRPRILVYHSIPAVLADSPSRPGRGGGTRDNTRIEAVSRRSIASAREMHPDILVLDLFGLTVGRGDRYYDGLHFGPRPSTPRDDDDTLLIGSESNLVLLNMLCND* # ORIGINAL: g2207.t1 original gene structure, not modified by PASA NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS gene 185 292 . + . ID=g2207;Name=g2207.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS mRNA 185 292 . + . ID=g2207.t1;Parent=g2207;Name=g2207.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS exon 185 292 . + . ID=g2207.t1.exon1;Parent=g2207.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS CDS 185 292 . + 0 ID=cds.g2207.t1;Parent=g2207.t1 #PROT g2207.t1 g2207 HYMEPPVRALQAAEDSGVEKGRFFVLKHGETRTVS* # ORIGINAL: g2208.t1 original gene structure, not modified by PASA NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS gene 1024 2798 . - . ID=g2208;Name=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS mRNA 1024 2798 . - . ID=g2208.t1;Parent=g2208;Name=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS exon 2196 2798 . - . ID=g2208.t1.exon1;Parent=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS CDS 2196 2798 . - 0 ID=cds.g2208.t1;Parent=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS exon 1426 1933 . - . ID=g2208.t1.exon2;Parent=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS CDS 1426 1933 . - 0 ID=cds.g2208.t1;Parent=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS exon 1024 1178 . - . ID=g2208.t1.exon3;Parent=g2208.t1 NODE_3646_length_3041_cov_39.063_potentialcontaminant AUGUSTUS CDS 1024 1178 . - 2 ID=cds.g2208.t1;Parent=g2208.t1 #PROT g2208.t1 g2208 MLLWHCVWVCVRVSASAGIAKSDDELAAKEHPSTAIHAFPSSSDGKASEKVPEKPSEKLFEKDKDKDKEKDKEKEKEKEKEKEKEKEKGGQATTGTLGLQTLSREPSVDAAYGPVPGSPRSAAAHGAGPSTAGGHAPTPTPTHTPGGLASHARSLLASAKPSASFLAMYGGSGSDSVGCVDMQLNYWQGRLKKDTGKEARRVSVKGSIRCIHVSRTWRAASDAPQSAPSSVHSTLATQRTMTHSQHVTTSSHVGYAHSQSADSPSTQPQTSVAQTAPLPVEQKAPNHHTTSPHPTAAVPATTGGSAAVQQQQQLQQQQQCPFTLTYHLREKRLAKIGRLGRKGPDGKAGITAPIDRIICLVAEKKAPDVAVFIDGVEWRSVLFLSISSQWPKIVKTFRVATFGDASALHSALLPRLSIDSD* # PASA_UPDATE: g9620.t1, single gene model update, valid-1, status:[pasa:asmbl_2359,status:3], valid-1 NODE_169_length_33721_cov_40.6234 . gene 14456 17244 . + . ID=g9620;Name=g9620.t1 NODE_169_length_33721_cov_40.6234 . mRNA 14456 17244 . + . ID=g9620.t1;Parent=g9620;Name=g9620.t1 NODE_169_length_33721_cov_40.6234 . five_prime_UTR 14456 14853 . + . ID=g9620.t1.utr5p1;Parent=g9620.t1 NODE_169_length_33721_cov_40.6234 . exon 14456 15543 . + . ID=g9620.t1.exon1;Parent=g9620.t1 NODE_169_length_33721_cov_40.6234 . CDS 14854 15543 . + 0 ID=cds.g9620.t1;Parent=g9620.t1 NODE_169_length_33721_cov_40.6234 . exon 15689 17244 . + . ID=g9620.t1.exon2;Parent=g9620.t1 NODE_169_length_33721_cov_40.6234 . CDS 15689 16939 . + 0 ID=cds.g9620.t1;Parent=g9620.t1 NODE_169_length_33721_cov_40.6234 . three_prime_UTR 16940 17244 . + . ID=g9620.t1.utr3p1;Parent=g9620.t1 #PROT g9620.t1 g9620 MLRQFPSTTGGCLLLSPNSTAFQRPASNMMQGTLPHGTSIRTSTDANSALNGKRPPPSSVMEWAARGSSSDEDSSEDALEGSLTSMQWLQNLRLPMHGGGEAPPLAFLGGGIPGLQRQDTASEPDIDCDDDMDSDLEKRTLPSPQKDGCGLDSPTKGEMDGAVPDGSDEIDEIYRRHGHNSGYAKPPHSYASLITHAISTSGDKRMSLSEIYDWVILNYPFYKHAGNGWKNSIRHNLSLNKCFVKVARPDDKTPCWTMNPNFQSAVEKVSNKHLQVMQSKKSPIGKQQQQQLQPQQPQQQQQQTQQQLVQQPAPKQVAKVKRPIRQMSNPLVPTEDGGQRDPSTGSPHTRPADLKAAASPAKQAGHVPAVGRALHPLQMQALAAQIAAQQAQSKPKRRQSKPSLKQQASVDSLQLSASSLASSSGSITKPRRRGSQQRSSVSSVRSSIDLSQLSLSGADIDALSQSNGGDLTSALSDDSPNPLLFSDFALGAQALPDDFNSADPRFAANAARSDGFDPLDAVLGDCNMLLTSSWGPTAQSIQASLQQHALSSAQQLQQQQHSQQSQLSQQQQQHPILQLQHAQGQHSQGGLAHGQEVVLPHSDAFIQAFDGGDGRLSLSGSGAARFAAEFLADDGIIDCFDWTSVM* # PASA_UPDATE: g9617.t1, single gene model update, valid-1, status:[pasa:asmbl_2358,status:12], valid-1 NODE_169_length_33721_cov_40.6234 . gene 1113 4438 . + . ID=g9617;Name=g9617.t1 NODE_169_length_33721_cov_40.6234 . mRNA 1113 4438 . + . ID=g9617.t1;Parent=g9617;Name=g9617.t1 NODE_169_length_33721_cov_40.6234 . five_prime_UTR 1113 1116 . + . ID=g9617.t1.utr5p1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 1113 1325 . + . ID=g9617.t1.exon1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 1117 1325 . + 0 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 1548 1679 . + . ID=g9617.t1.exon2;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 1548 1679 . + 1 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 2041 2188 . + . ID=g9617.t1.exon3;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 2041 2188 . + 1 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 2438 2539 . + . ID=g9617.t1.exon4;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 2438 2539 . + 0 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 2886 3030 . + . ID=g9617.t1.exon5;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 2886 3030 . + 0 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 3266 3355 . + . ID=g9617.t1.exon6;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 3266 3355 . + 2 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 3732 3804 . + . ID=g9617.t1.exon7;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 3732 3804 . + 2 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 3986 4084 . + . ID=g9617.t1.exon8;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 3986 4084 . + 1 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . exon 4262 4438 . + . ID=g9617.t1.exon9;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . CDS 4262 4418 . + 1 ID=cds.g9617.t1;Parent=g9617.t1 NODE_169_length_33721_cov_40.6234 . three_prime_UTR 4419 4438 . + . ID=g9617.t1.utr3p1;Parent=g9617.t1 #PROT g9617.t1 g9617 MSVCKNTTSYKRKGRCAFVSMDAAVDSAGVASVDPAKQAAPKRQRETEVDATATDGADSHAEPYQPRRKRYKTKLGSGGPKENVNDGSVRISEEVTRAFEAFEKNLRAPRLINNRGLSVAVWDASRRLAVVQVQRGKSLVAAGHSVDGMNVLLPEEALFLLEKNTLAVLRESDGVPMSVQEAFATIFPTELGVSKYAVYAHLKRFGYVVLRFDAERGRTVQTQATLPSDAGTVAHVAGSVDPATAGAEVHAHGISTLIEHPCELDSLSGGLGISCAEALKRLRVINAQSLSTLQLQGAPTERADAIDFDIYKPNAAFKKTNPGPPAYRLKVYSRADAFPSLQCLHLLTQQCNGAPLKLAVVDGLTVSFYSLDALPIIVLAAHPP* # ORIGINAL: g9618.t2 original gene structure, not modified by PASA # ORIGINAL: g9618.t1 original gene structure, not modified by PASA NODE_169_length_33721_cov_40.6234 AUGUSTUS gene 5329 8102 . + . ID=g9618;Name=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS mRNA 5329 8102 . + . ID=g9618.t2;Parent=g9618;Name=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 5329 6554 . + . ID=g9618.t2.exon1;Parent=g9618.t2 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 5329 6554 . + 0 ID=cds.g9618.t2;Parent=g9618.t2 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 6803 8102 . + . ID=g9618.t2.exon2;Parent=g9618.t2 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 6803 8102 . + 1 ID=cds.g9618.t2;Parent=g9618.t2 NODE_169_length_33721_cov_40.6234 AUGUSTUS mRNA 5329 7161 . + . ID=g9618.t1;Parent=g9618;Name=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 5329 6554 . + . ID=g9618.t1.exon1;Parent=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 5329 6554 . + 0 ID=cds.g9618.t1;Parent=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 6803 7161 . + . ID=g9618.t1.exon2;Parent=g9618.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 6803 7161 . + 1 ID=cds.g9618.t1;Parent=g9618.t1 #PROT g9618.t2 g9618 MEALLNTTWSASASLTQLVPSPSSNAPLPFVPVASPPFMPPPHRNHTDYGGLSSQHEVDSASLLVLIGLLTVTILTTWLFKRRRVRFIHESGLSMIYGIIIGIVLRYCAAEPSGLQRLVTFRPEIFFYLLLPPIVFNAGYDLDSASFFGRFGPICLFAFVGTTISALVTGGITYAIVLSGLENLPLSLNDCLLLGSLLSATDTVTVLSVFSTGGVDAQLYALVFGESALNDAVAIALYNTVRGFDGYGNAVGIFVATFLGSVLIGIAGALIAALVTKHANLESEPILQSALFVVASYSTFLMGELAGLSGIVAILFCGITQAHYTKRNLSVASKTLVGGMFELISFMADSFIFCYLGLTIFTYEHHEWRPAFMTLSLVTVLFARAANIFPLAFLLNLCTGRAPKPVPFRHMIVMWAAGLRGAISFALAMEDHATESRRIILSTTLFIVAVTVIVLGGVSLPLVNCLGVIRRRAESIELSSVENMVNETDSAAAAAAAAAGTSPVPPSPPPSRDAVQGGIGAWASRLRNSIAGESATSYARLNDSPSKAVSNPSGSAFRTTCGDEYLVSSRRDGCIGRLFRRLDDRYLVPFFCRTATGISMACCDSGAMVSSSVDVASGLPSAYTTVGGKGVDQGKGSVQDGSLSSRLPVPASIYARRRSSVAAPAPVLDCSCTRRSSSDVLARPNGLSASSLVGVAQRNGGAPCDRCMHRRNFSIQDTLHEAHGEHEMDWEAGGEPTFPGEPAAFRRFSGADCGPIVWSFGSSRNSVTNPADDCVSAMPPLLWVGPPSAGLQGPVSEDMHPGAGAAVVSGLNGAHPAAMARHGTASDSGNVGFELSQIPDM* #PROT g9618.t1 g9618 MEALLNTTWSASASLTQLVPSPSSNAPLPFVPVASPPFMPPPHRNHTDYGGLSSQHEVDSASLLVLIGLLTVTILTTWLFKRRRVRFIHESGLSMIYGIIIGIVLRYCAAEPSGLQRLVTFRPEIFFYLLLPPIVFNAGYDLDSASFFGRFGPICLFAFVGTTISALVTGGITYAIVLSGLENLPLSLNDCLLLGSLLSATDTVTVLSVFSTGGVDAQLYALVFGESALNDAVAIALYNTVRGFDGYGNAVGIFVATFLGSVLIGIAGALIAALVTKHANLESEPILQSALFVVASYSTFLMGELAGLSGIVAILFCGITQAHYTKRNLSVASKTLVGGMFELISFMADSFIFCYLGLTIFTYEHHEWRPAFMTLSLVTVLFARAANIFPLAFLLNLCTGRAPKPVPFRHMIVMWAAGLRGAISFALAMEDHATESRRIILSTTLFIVAVTVIVLGGVSLPLVNCLGVIRRRAESIELSSVENMVNETDSAAAAAAAAAGTSPVPPSPPPSRDAVQGGIGAWASRLRN # ORIGINAL: g9623.t1 original gene structure, not modified by PASA NODE_169_length_33721_cov_40.6234 AUGUSTUS gene 22375 28596 . + . ID=g9623;Name=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS mRNA 22375 28596 . + . ID=g9623.t1;Parent=g9623;Name=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 22375 23151 . + . ID=g9623.t1.exon1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 22375 23151 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 23377 23550 . + . ID=g9623.t1.exon2;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 23377 23550 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 23814 23936 . + . ID=g9623.t1.exon3;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 23814 23936 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 24190 24381 . + . ID=g9623.t1.exon4;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 24190 24381 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 24669 24756 . + . ID=g9623.t1.exon5;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 24669 24756 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 25192 25673 . + . ID=g9623.t1.exon6;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 25192 25673 . + 2 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 26016 26211 . + . ID=g9623.t1.exon7;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 26016 26211 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 26413 26609 . + . ID=g9623.t1.exon8;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 26413 26609 . + 2 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 26836 27317 . + . ID=g9623.t1.exon9;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 26836 27317 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 27595 27739 . + . ID=g9623.t1.exon10;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 27595 27739 . + 1 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 27992 28122 . + . ID=g9623.t1.exon11;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 27992 28122 . + 0 ID=cds.g9623.t1;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 28335 28596 . + . ID=g9623.t1.exon12;Parent=g9623.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 28335 28596 . + 1 ID=cds.g9623.t1;Parent=g9623.t1 #PROT g9623.t1 g9623 MGPRGGGFGGGGRGGVSRGRGRGGPSRGRGGSRGRGTSRGRGGSAFAARGSAEDASKTAKVAAAAEDGRKPNPFDMRVNRRKFEIMGRRVKGETGNVAESRSKAIETRKKTLLVEFQQRGKANAFVDRRFGENDVNMSVEEKMMKRFAKERQRQASRFNINDDDSDAGSFGGESEEEELTHLGKSIKNIDDFDERDLRLDSDGEDEGMSAREISDLHFGGGLREKRAREEDGDDEQDGESSQRPKSRKEVMEEVIARSKMHKAERQKEKERVEDELDRVDEMFNGIRGLLKRRDDEEGPTVDPRADPRVALMRQMARPDDYDVAVRELAYDLKAKAADRLKTPAELAAEEKTKLEKLEADRLRRMRGEVHSAPDGSLHPGHGPAHEQSADGLDENFEIKDDRVPIAYKDGKLITTPSDAAPKIRKRTDFDMVVSGDQVGDGNGDGDDADADEDMGESGDEGSDGDSGDDDEGDEDDEDEDEDDEEEASDLELDASDGDSDGSDDESEDDAAKGTDPRRRPKNGVKGGNDMAAVAKQQKRRTPPMDAETRKRVEEMKAAAASELPYTFAAPSDVGEFQSYFAGRPSSDQATVVRRIIACNALSIAAANREKLSVFIGVLMDHVTFLGDEGDGAFPAELISTHVGLIHELATKLPEAAVREAKERLGAIAGTLENDMKSGKRSGFPSCGSLVLLSVLTSIFPASDFRHPVTTPAALLIARILSQCHVKTPDDVARGLFLCDIAKKSHPHHQRIPCLTPSVVRPPNSFNHVPAQFVSDSKRFFPEAVAFLTGVVALASSSGAVLADIKTVSLQVSPNFLSTDASKVLHLTGSPHSAPKTTSSSTVGNGTLLHADANGKKTKKSRKDGDVTGVTEGDAGGATVSAPSLQFVKSIYAPNADYLSSRQFGIAAVAVAATLLESFAAIYKDLDCFGEIFETARKYLAALLSNKSAPEIDSVVKSAVSTIDGRTKTAVTRRGPLQYQRHKPIALKMYTPKFDDSFEIGRRRDPDKDRNETQKLKYKHKQEMKGAIREIRKDSAFIGALKHKEMRDNDMDRRNRVRALHAQLTDQQSEANMEKKEKRKLKM* # ORIGINAL: g9622.t1 original gene structure, not modified by PASA NODE_169_length_33721_cov_40.6234 AUGUSTUS gene 19633 21744 . - . ID=g9622;Name=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS mRNA 19633 21744 . - . ID=g9622.t1;Parent=g9622;Name=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 21507 21744 . - . ID=g9622.t1.exon1;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 21507 21744 . - 0 ID=cds.g9622.t1;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 21254 21342 . - . ID=g9622.t1.exon2;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 21254 21342 . - 2 ID=cds.g9622.t1;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 20984 21127 . - . ID=g9622.t1.exon3;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 20984 21127 . - 0 ID=cds.g9622.t1;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 20732 20807 . - . ID=g9622.t1.exon4;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 20732 20807 . - 0 ID=cds.g9622.t1;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 19633 20495 . - . ID=g9622.t1.exon5;Parent=g9622.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 19633 20495 . - 2 ID=cds.g9622.t1;Parent=g9622.t1 #PROT g9622.t1 g9622 MPEMPPNYTMRGNAFAARSSRMNYRIIACSFVVAFLLLIYSRGGLRLYSATTPDVIYGVMLDAGSTGSRVHVYSFETSEAGDLILVNEVFVQNKVGLSTFAGSPEKASKAGESLRELLDVCLKTVPAPLYASTPIALKATAGLRLLPGSVSEDILKSCRKVMKEYPFSLADDAVGIMDGIDEGFFGWVTVNYLMGRLDPSSTHAPVAVFDLGGGSAQIVLPMDHGPMHTAKSWIPKALLREMPMFGAKRTLYSHSYLEYGLKSARAKVSALEAAAAECAPPMEDATFSFGNGSFTLTGDEDGGTHESCSNEMAGIFGKQHGVCHSEACGIGGVPQPLIPDDLHVVAMSYYFEIAMKSGIFAGQVDHDGDGTLEEVHTVQVEVGAYRKKAQELCGNPSVKVATLIAEPESDLPKFGCVDLSYIHSLLTTGLGLDDTDMITLAKKIEYRGNHIETAWCLGAMIYELGKGEQ* # PASA_UPDATE: g9621.t1, single gene model update, valid-1, status:[pasa:asmbl_2360,status:12],[pasa:asmbl_2363,status:12], valid-1 NODE_169_length_33721_cov_40.6234 . gene 17860 18989 . + . ID=g9621;Name=g9621.t1 NODE_169_length_33721_cov_40.6234 . mRNA 17860 18989 . + . ID=g9621.t1;Parent=g9621;Name=g9621.t1 NODE_169_length_33721_cov_40.6234 . five_prime_UTR 17860 17924 . + . ID=g9621.t1.utr5p1;Parent=g9621.t1 NODE_169_length_33721_cov_40.6234 . exon 17860 18107 . + . ID=g9621.t1.exon1;Parent=g9621.t1 NODE_169_length_33721_cov_40.6234 . CDS 17925 18107 . + 0 ID=cds.g9621.t1;Parent=g9621.t1 NODE_169_length_33721_cov_40.6234 . exon 18425 18989 . + . ID=g9621.t1.exon2;Parent=g9621.t1 NODE_169_length_33721_cov_40.6234 . CDS 18425 18679 . + 0 ID=cds.g9621.t1;Parent=g9621.t1 NODE_169_length_33721_cov_40.6234 . three_prime_UTR 18680 18989 . + . ID=g9621.t1.utr3p1;Parent=g9621.t1 #PROT g9621.t1 g9621 MNTTTQTFSGYTMDSRPTSRVMAPPGGRSSNIFGTDPVPQQNQQQQRFQAANENAPFATNANAYAAPQPVKAPGFNHTQTEQSIYQPPQQLSHAQSAAQRQQQSSVFAGAIAQAEFADRGSRPNSFQPSSRVLQPPGGRTNNIFG* # PASA_UPDATE: g9624.t1, single gene model update, valid-1, status:[pasa:asmbl_2357,status:12], valid-1 NODE_169_length_33721_cov_40.6234 . gene 28974 33588 . - . ID=g9624;Name=g9624.t1 NODE_169_length_33721_cov_40.6234 . mRNA 28974 33588 . - . ID=g9624.t1;Parent=g9624;Name=g9624.t1 NODE_169_length_33721_cov_40.6234 . exon 33453 33588 . - . ID=g9624.t1.exon1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . CDS 33453 33588 . - 0 ID=cds.g9624.t1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . exon 32070 33192 . - . ID=g9624.t1.exon2;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . CDS 32070 33192 . - 2 ID=cds.g9624.t1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . exon 31079 31795 . - . ID=g9624.t1.exon3;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . CDS 31079 31795 . - 1 ID=cds.g9624.t1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . exon 30343 30797 . - . ID=g9624.t1.exon4;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . CDS 30343 30797 . - 1 ID=cds.g9624.t1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . exon 28974 30148 . - . ID=g9624.t1.exon5;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . CDS 29208 30148 . - 2 ID=cds.g9624.t1;Parent=g9624.t1 NODE_169_length_33721_cov_40.6234 . three_prime_UTR 28974 29207 . - . ID=g9624.t1.utr3p1;Parent=g9624.t1 #PROT g9624.t1 g9624 MVDLNLIDKRDARAETLSGGMKRKLCVGIALVGGSKIVLLDEPTAGMDPYARRATWDLILKHKPGRTMILTTHHMDEADLLGDRIAIMAAGKLQCVGSSLFLKAKYGVGYHMTIVKGDGCEESKVTETIQRHVPNAQLMTDVALELSYVLPSQSSGAFRHLFAEIDKTSHDLAISSYGVSVTTMEEVFLRVGEIAEKDDVHNDAEDRENGLKSCKNLRPSSVGLIAAASAEKPRIESDPEEGSAVPMHDMSISMVKVDVAHAGDMQKIGGERVQGNGRLALQQFKAMFDKRRVHSMRDKKAILAQLLAPVVFVLLAMIIAKTYPPPTDQPLLGFTVGAFPTAYVNTSDPSGVPARNVYVQSLSPLATSIATSMWSYLRSNANPYTSLWKEGSAKNPLLYVDDLTRTGMINTLVQTYNPMRNKFGSYGAYTIDAFTDGTGNTTATVTIWYQSNAYHSAPTYLNALSNALLRESNASLSIITCNHPLPASFDSKLDDLRSSGSQFSVAILFIFGMAFMAAYFVNFLVNERASGAKHLQFLAGVSSVSYWFGTLAWDLLNYLLPLCIIYIIIGGFAIPEYTGDNFGAIALLLLLYGWSMLPLMYVASFGYSGATTAYVSLTMINVIVGLATVVTVWTLDMLDTSQSTNDVLKWLFLAFPPYAMGRGLMDTVYNSIVGGYRKQVGLSGTANPLTWGVCGRNLVFMFIFGIVFMVLVFVAEKRWLSLSRFRAARDSRKGIVAVGASTQSAQEDDDVALERERVGRSNGEGEVVFVRSLCKTYDARGGQPPKVAVDNVSFGIPKNECFGLLGVNGAGKTTTFKMLTGDFTPSSGEAYLQGFSVTGELDEVRRRVGYCPQAIDAMIDAMTGRELLIMFARLRGIVPSDQKRVASAWISRLQLDRYADLPCGQYSGGNKRKLSVAIGLVGDPPILFLDEPSAGVDAKARRFLWNTITSVVHQGTSVVLTSHSMEECEALCNRLGIMVNGRLMCLGSPQHLKNKFGGGYEVNVKVKGPDMQQQHAAQQRIVEARNSAAVAVEIAHVPERRTDVDTTRLEAHISATFVGARLKEKHNGLLCYEIKGADLSLAQIFGELEDARTEYAIEDYSVSQTTLEQVFLGFAKAQGAGAS* # ORIGINAL: g9619.t1 original gene structure, not modified by PASA NODE_169_length_33721_cov_40.6234 AUGUSTUS gene 9313 12616 . - . ID=g9619;Name=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS mRNA 9313 12616 . - . ID=g9619.t1;Parent=g9619;Name=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 12287 12616 . - . ID=g9619.t1.exon1;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 12287 12616 . - 0 ID=cds.g9619.t1;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 11203 11976 . - . ID=g9619.t1.exon2;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 11203 11976 . - 0 ID=cds.g9619.t1;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 10491 11029 . - . ID=g9619.t1.exon3;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 10491 11029 . - 0 ID=cds.g9619.t1;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 9642 10149 . - . ID=g9619.t1.exon4;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 9642 10149 . - 1 ID=cds.g9619.t1;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS exon 9313 9507 . - . ID=g9619.t1.exon5;Parent=g9619.t1 NODE_169_length_33721_cov_40.6234 AUGUSTUS CDS 9313 9507 . - 0 ID=cds.g9619.t1;Parent=g9619.t1 #PROT g9619.t1 g9619 MAARAVDEGDGPPNMSLLSGSQKSALSSAIMRNVAAKRRQKSPQGPGESASSPQLGSMSVHKTAYNGNGADSVPKATTASSPDPARFAKGFKLDRRAATTDELRPQRTPEAKLQHLRTLLVSVGQENERLVRTVRELEASASARVKTLEDRLSTAEDRVNTTYSEAELLRDQMTETAQRNGHLHVVISNLREEIGTTCGRLSTQLEEQNKVSQSLRAELAARESQDRLQSNTIADLERRVDGLARASKESEGVAIDAVERLRSAVAEIDRWKSVAADRHDLLSRVFADAQNLSNLTQEQQRARDAQSVSSASGVESEAESAVAFNGSSVGGKKDSSKRRRSGGSNTSGISASGKPREGERYTRMLEEQNGAMTALVEEFVKMSQQQQQQQQQQQQQQQRQFHNIMQSQNQSSIDQQHQQFHQASIPPMTPIAYHTVPTMTAFTAPASYPVVYPASAAHVYIPHTPTLTVPVTPSLLNASMLHTATGVVPVVNVETPAQARMRDLVSFYKTQIDRREADVRTLNAEMEAMRRKQDAECVTCATPVQPSSPYAAHRARELPPRNDWWYDRLRALARQVDLTRTQSIRTNDDYADYLLHKQRSVDALAAQISDVKTRLHREAAAELAEQQREQRGTAGRYGSAYESALHSSYASRRAYDGERSLGRAKSDLRELEEMIDSMRGIRRGAVGHMAHGGHAGTPLSASLRVDESRAFGTSMRQEASHHSTTAAHSSSKLGASKHGNIGRHGDRDASSPTRRAPAGRTSGRVGDDEFELTTSDTTDAF* # ORIGINAL: g7132.t1 original gene structure, not modified by PASA NODE_3824_length_2678_cov_39.4222 AUGUSTUS gene 138 1336 . - . ID=g7132;Name=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS mRNA 138 1336 . - . ID=g7132.t1;Parent=g7132;Name=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS exon 1313 1336 . - . ID=g7132.t1.exon1;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS CDS 1313 1336 . - 0 ID=cds.g7132.t1;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS exon 1102 1191 . - . ID=g7132.t1.exon2;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS CDS 1102 1191 . - 0 ID=cds.g7132.t1;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS exon 747 854 . - . ID=g7132.t1.exon3;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS CDS 747 854 . - 0 ID=cds.g7132.t1;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS exon 490 581 . - . ID=g7132.t1.exon4;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS CDS 490 581 . - 0 ID=cds.g7132.t1;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS exon 138 263 . - . ID=g7132.t1.exon5;Parent=g7132.t1 NODE_3824_length_2678_cov_39.4222 AUGUSTUS CDS 138 263 . - 1 ID=cds.g7132.t1;Parent=g7132.t1 #PROT g7132.t1 g7132 MATRVAFQGLPGAYSQRAALDHFEGRSVDTVPCDTFAQVFSSVESGSVDCGIVPIENTLSGTFHSNYDNLLNFKVSIVGEHAVHDAHCLIALPGTKIEDIKEIRSHPHVLDQCERSLTSEFSHVTRIATSDTAGACAEIKAKNIQG # ORIGINAL: g9098.t1 original gene structure, not modified by PASA NODE_840_length_17021_cov_42.1059 AUGUSTUS gene 2438 6114 . - . ID=g9098;Name=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS mRNA 2438 6114 . - . ID=g9098.t1;Parent=g9098;Name=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 6109 6114 . - . ID=g9098.t1.exon1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 6109 6114 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 5661 5907 . - . ID=g9098.t1.exon2;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 5661 5907 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 5220 5392 . - . ID=g9098.t1.exon3;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 5220 5392 . - 2 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 4655 5154 . - . ID=g9098.t1.exon4;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 4655 5154 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 4397 4488 . - . ID=g9098.t1.exon5;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 4397 4488 . - 1 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 3989 4113 . - . ID=g9098.t1.exon6;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 3989 4113 . - 2 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 3397 3465 . - . ID=g9098.t1.exon7;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 3397 3465 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 3135 3242 . - . ID=g9098.t1.exon8;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 3135 3242 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 2822 2974 . - . ID=g9098.t1.exon9;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 2822 2974 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 2438 2512 . - . ID=g9098.t1.exon10;Parent=g9098.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 2438 2512 . - 0 ID=cds.g9098.t1;Parent=g9098.t1 #PROT g9098.t1 g9098 MPRCRALYEYVSGHEIEVSVAEGEVCKLLKEEDEYGNKEWWMVENTAGEQGFVPANYMEMMEDAPSTALSRKDSVASANSSVADAPARREEDHRDRRESVDSDDSEVEASYGQPADIKGRDNASTRGRSDSISSRSAAATVRSINFSEIEAHSKVCSTSSAVSETEFITVTVNDPQTVGVISKSVTFAVITVTNMAGFRAPNFQVRRTYEDFLWVREFLASANPARIIPPLPSKQSVVQGTTEYFIQKRQISLQNFVKRMCNHPALRKHPYWTLFLEATDRELKKAKKEKPAKRRKMRSPSTKPERDPRLARARVYLTELERQLKELVKKIDRNVKAIIDFDPANTRETLKSICENEPLGGYLQVSTDTLFKTFGSFSIEEEKTEEKIFKQDIKDIITYLRAAKTLIDRLEEAEDDLAYWREQVRNLKAEDKKSDKAIETAESKERRSEDELRVFWQTSTFEINHFDIQKEKDFRDTFMVYVGGKIQQQQKVLGRWDAAMQKVKQEVNPAIRGIR* # PASA_UPDATE: g9101.t1, single gene model update, valid-1, status:[pasa:asmbl_9631,status:12], valid-1 NODE_840_length_17021_cov_42.1059 . gene 14477 15846 . + . ID=g9101;Name=g9101.t1 NODE_840_length_17021_cov_42.1059 . mRNA 14477 15846 . + . ID=g9101.t1;Parent=g9101;Name=g9101.t1 NODE_840_length_17021_cov_42.1059 . exon 14477 15846 . + . ID=g9101.t1.exon1;Parent=g9101.t1 NODE_840_length_17021_cov_42.1059 . CDS 14477 15562 . + 0 ID=cds.g9101.t1;Parent=g9101.t1 NODE_840_length_17021_cov_42.1059 . three_prime_UTR 15563 15846 . + . ID=g9101.t1.utr3p1;Parent=g9101.t1 #PROT g9101.t1 g9101 MSRKSPSVWEGAIAGAAGGMAAAIVTQPIELIKVRLQLAGESLKMSSMTSLGRGSALPLSSDPAGHIQRSSHDPPMLRAAEKVRRTVQLVRSIATNDGIINGFYRGLSASLARQAVYSTTRFGVYAQLKDWASTRFDIGASRGSAQSKLPISALLPISMAAGAAGAVISCPTDLVLVRMQSDGRLEPSQRRNYRNVFDGIARITREEGIAALWRGSVPNVNRAMVVAAGQLCTYDACKSWLTLERSSSFGQGFASSEKQRSLLNDGLFAHIVASLMSGVVTCVAASPVDVIRTRVMAAKLSAAGGVQYSGSFDCLKHILGTEGIRGFYRGLGAYYAKVGPYCVTIFVCYEQVHGMLRRMRD* # ORIGINAL: g9097.t1 original gene structure, not modified by PASA NODE_840_length_17021_cov_42.1059 AUGUSTUS gene 271 1866 . + . ID=g9097;Name=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS mRNA 271 1866 . + . ID=g9097.t1;Parent=g9097;Name=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 271 415 . + . ID=g9097.t1.exon1;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 271 415 . + 0 ID=cds.g9097.t1;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 607 785 . + . ID=g9097.t1.exon2;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 607 785 . + 2 ID=cds.g9097.t1;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 961 1111 . + . ID=g9097.t1.exon3;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 961 1111 . + 0 ID=cds.g9097.t1;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 1350 1453 . + . ID=g9097.t1.exon4;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 1350 1453 . + 2 ID=cds.g9097.t1;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 1651 1866 . + . ID=g9097.t1.exon5;Parent=g9097.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 1651 1866 . + 0 ID=cds.g9097.t1;Parent=g9097.t1 #PROT g9097.t1 g9097 MFRELLVAYPAVTRSHLNVQSNLLECLLDMGCYADGQKTLDKYEGALDSLMEKSAVLFYTTALLRAYEVCVVGNFAPDTATDKGLTNEEVAAIDALHKAIEFNPHVPKYLLEMKSVVLPPEHVVLRGDSEAVAYAFDHLIHWQRCRGALQLLQLTWEGSFRLVPRALHKGLRFEPYPDAMEVTDRKLLPAHHKVSVYPEREVPVLVIGTACLAMAVTLVVFYAYRYPALQRILAGYWGTLKSHRRLADAMPATGMPATTPVPPM* # ORIGINAL: g9100.t1 original gene structure, not modified by PASA NODE_840_length_17021_cov_42.1059 AUGUSTUS gene 12025 14076 . + . ID=g9100;Name=g9100.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS mRNA 12025 14076 . + . ID=g9100.t1;Parent=g9100;Name=g9100.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS exon 12025 14076 . + . ID=g9100.t1.exon1;Parent=g9100.t1 NODE_840_length_17021_cov_42.1059 AUGUSTUS CDS 12025 14076 . + 0 ID=cds.g9100.t1;Parent=g9100.t1 #PROT g9100.t1 g9100 MEVRVKPDNTTHGCNGSDDDLHQLRALARAGADDVPAAVAVSGNLSTIAEPIPALRGNDDSAAALHVPFVGIASLSRLRIAVVDIFGESDTREGWAGSRTQCLAQSAASLFPYQFDYVQGSRGYGHVAAWLQAEYCAQCDSHHAKKRFVLLIASCTVVHDVSALIRESLALGVAIDRAGVAIAGHVVNAPPVLPFLHEQLTLIDTRKYREFGCPDTGPVLGIFRTSSFPDFSTVGDIKKPRILSRSFSTTRSWFVEGSGSFMTPFVSASLMRDVPVWSVPEALRDPRVRVYGYPMFPDNGKFEQNARSCASSLLCAHLNGRGSAKDVMRELEAAFAQLKFTFSPVRSVGMSGCFDQADIMHWTRYTPASGSAEKPKPSPSSGRCALNPDNKPAYLGTNERPLTVSRLTSGAAFIRESAAAGSIHLMSVVGGMNGLHVVSVLRPTYITFFDYGASQQICVGRLYIEILLQSSSRADFISQLFGRNLLRFLKETGATDLTLDNQAQYLSRPIDNEIVTSLLSPASGLTEFSKQCYELFFVPKLRAPLEFRTFSPYFIFNANPSANAGNFTVNYGCEDSFLESDAAVISVRDHLQASIPIGLADYDLNVLEDFVRHPDSLRSDSIVIQISNADDKIYPYIKNFEGQLAAVNALLQHLPKPSLVFVLSTRGVYSISKEGWHFRKHTM* # PASA_UPDATE: g9099.t1, single gene model update, valid-1, status:[pasa:asmbl_9630,status:3], valid-1 NODE_840_length_17021_cov_42.1059 . gene 6764 11281 . + . ID=g9099;Name=g9099.t1 NODE_840_length_17021_cov_42.1059 . mRNA 6764 11281 . + . ID=g9099.t1;Parent=g9099;Name=g9099.t1 NODE_840_length_17021_cov_42.1059 . five_prime_UTR 6764 6906 . + . ID=g9099.t1.utr5p1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 6764 7001 . + . ID=g9099.t1.exon1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 6907 7001 . + 0 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 7159 7639 . + . ID=g9099.t1.exon2;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 7159 7639 . + 1 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 7760 8085 . + . ID=g9099.t1.exon3;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 7760 8085 . + 0 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 8316 8346 . + . ID=g9099.t1.exon4;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 8316 8346 . + 1 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 8554 8576 . + . ID=g9099.t1.exon5;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 8554 8576 . + 0 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 8721 8760 . + . ID=g9099.t1.exon6;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 8721 8760 . + 1 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 8911 8923 . + . ID=g9099.t1.exon7;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 8911 8923 . + 0 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 9216 9320 . + . ID=g9099.t1.exon8;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 9216 9320 . + 2 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 9531 9587 . + . ID=g9099.t1.exon9;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 9531 9587 . + 2 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 9749 9955 . + . ID=g9099.t1.exon10;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 9749 9955 . + 2 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 10239 10357 . + . ID=g9099.t1.exon11;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 10239 10357 . + 2 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 10462 10550 . + . ID=g9099.t1.exon12;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 10462 10550 . + 0 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 10860 10982 . + . ID=g9099.t1.exon13;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 10860 10982 . + 1 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . exon 11142 11281 . + . ID=g9099.t1.exon14;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . CDS 11142 11175 . + 1 ID=cds.g9099.t1;Parent=g9099.t1 NODE_840_length_17021_cov_42.1059 . three_prime_UTR 11176 11281 . + . ID=g9099.t1.utr3p1;Parent=g9099.t1 #PROT g9099.t1 g9099 MSLKQPVKRVRPWSMCQPTHKRMGTRQQMSGSMIAREWILVNEEADDFRYGIQPVSSFTKTVKLRTNDTLGEASPRNYTRGEDITAEMEALGIHRAESRAESMGPVLGARRDDPDLPLGASATSRPTSSKSPGPPVEERSTRGSAMDTGKTTKGGSTGRRKGEETVLSKVTVSKQLRLKRVADMEKEISPKPASRLRDLNKPMLREVIQSLGLHDSRVDLKNVVGGSAKDSRDRGTQKKPAPVAGVINKWGTEGRPHSGSGAAAGAATGGTGSNRASPDVYATSEVDSFVSNGWIPPKSKRRQSDSKKAEPARYGPMLSKRKSETTSDFNRMSSFNGPQGGTPTDFEKSAEGTPSPSKSRPGSPSEKEIKKIAKDFVAWLGSLGGQDGVDEATIASLFSRNTEYQPAPMVPIHLVDPATVPVELRRASPDAHGTSSALSAMGFGRSILDEEEPQRPRFDVTGSTRKNVQRPKFGAWYLPTDLWKTHAPDAPLEDPKSSKDKKQTTTMRKKARELDATVAQLYGAQLYKEFIVQKGLRMPRFLEAVKTEINGIESTHVIDSRKDSASASSSDDESDQDNGV* # PASA_UPDATE: g8167.t1, single gene model update, valid-1, status:[pasa:asmbl_9873,status:3], valid-1 NODE_896_length_16097_cov_38.9469 . gene 8379 14622 . - . ID=g8167;Name=g8167.t1 NODE_896_length_16097_cov_38.9469 . mRNA 8379 14622 . - . ID=g8167.t1;Parent=g8167;Name=g8167.t1 NODE_896_length_16097_cov_38.9469 . five_prime_UTR 14505 14622 . - . ID=g8167.t1.utr5p1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 14320 14622 . - . ID=g8167.t1.exon1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 14320 14504 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 13822 14011 . - . ID=g8167.t1.exon2;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 13822 14011 . - 1 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 13456 13563 . - . ID=g8167.t1.exon3;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 13456 13563 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 12991 13102 . - . ID=g8167.t1.exon4;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 12991 13102 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 12734 12821 . - . ID=g8167.t1.exon5;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 12734 12821 . - 2 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 12310 12563 . - . ID=g8167.t1.exon6;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 12310 12563 . - 1 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 12053 12129 . - . ID=g8167.t1.exon7;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 12053 12129 . - 2 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 11528 11745 . - . ID=g8167.t1.exon8;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 11528 11745 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 11108 11345 . - . ID=g8167.t1.exon9;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 11108 11345 . - 1 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 10687 10836 . - . ID=g8167.t1.exon10;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 10687 10836 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 10320 10401 . - . ID=g8167.t1.exon11;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 10320 10401 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 10028 10161 . - . ID=g8167.t1.exon12;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 10028 10161 . - 2 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 9775 9841 . - . ID=g8167.t1.exon13;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 9775 9841 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 9366 9445 . - . ID=g8167.t1.exon14;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 9366 9445 . - 2 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 9025 9159 . - . ID=g8167.t1.exon15;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 9025 9159 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . exon 8379 8638 . - . ID=g8167.t1.exon16;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . CDS 8441 8638 . - 0 ID=cds.g8167.t1;Parent=g8167.t1 NODE_896_length_16097_cov_38.9469 . three_prime_UTR 8379 8440 . - . ID=g8167.t1.utr3p1;Parent=g8167.t1 #PROT g8167.t1 g8167 MSQRRLFRVVGATQEAMAFKNCALVSETDFPDFGKRKHIRIRPQDPRARATMPAEGYILTICPDKDIIDKNRETLSVQPPMPVIGFNSAQRQDWMRLANKDVLEIEPFDPIADGNGACVAIATVEIDFYKAKPTQPVKINTDNLGPWFVQEFSGIYLQKNEWLTFKYENVLLAVRVTKLELVDLEAMRSGSASKGNADAAFGVLLNESNVRFVKAPESQLRLEGKDQTQARTAIINPSWNFEQMGIGGLDKEFSGIFRRAFASRVFPPELLKQLGITHVKGILLYGPPGTGKTLMARQIGKMLNARTPKIVNGPEILSKYVGESEKNIRELFGDAEKEFKAKGDDSALHIIVFDEIDAICKQRGSRNDNTGVHDTVVNQLLSKMDGVDQLNNVLVIGMTNRRDMIDEALLRPGRLEVQMEISLPDEHGRVQILKIHTSQIKDSDRMGSDVDLAELATLTKNFSGAELAGLVRSASSFAMNRLIKAAQKVEVNEDASKTLKVTREDFICALEEVKPAFGSADETLGACIQNGIISWGAEVQRVLDDGKLFVQQVSHSDRTPLVSVLLEGPTGSGKTALAARLAMESEYPFVKMVSPEKMVGFSEAAKCSQITKVFDDSYKSPVSVIVVDDIERLLEYAPIGPRFSNTVLQTLMVLLKKQPPKGKRLLVLATTSRRSVLADMGLTDSFDATLKVPNLTKIDQITRALMELGIFSAEEWKEFNSKQAGVLQNVRLWIGIKKLIMLAEMAKQDASKVDKFLESLRDTCLENPDFN* # ORIGINAL: g8166.t1 original gene structure, not modified by PASA NODE_896_length_16097_cov_38.9469 AUGUSTUS gene 320 7995 . + . ID=g8166;Name=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS mRNA 320 7995 . + . ID=g8166.t1;Parent=g8166;Name=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 320 476 . + . ID=g8166.t1.exon1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 320 476 . + 0 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 681 758 . + . ID=g8166.t1.exon2;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 681 758 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 958 1363 . + . ID=g8166.t1.exon3;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 958 1363 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 1601 2120 . + . ID=g8166.t1.exon4;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 1601 2120 . + 1 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 2337 2520 . + . ID=g8166.t1.exon5;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 2337 2520 . + 0 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 2638 2922 . + . ID=g8166.t1.exon6;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 2638 2922 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 3133 3228 . + . ID=g8166.t1.exon7;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 3133 3228 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 3482 3593 . + . ID=g8166.t1.exon8;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 3482 3593 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 3735 3952 . + . ID=g8166.t1.exon9;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 3735 3952 . + 1 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 4204 5239 . + . ID=g8166.t1.exon10;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 4204 5239 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 5348 6055 . + . ID=g8166.t1.exon11;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 5348 6055 . + 1 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 6248 6711 . + . ID=g8166.t1.exon12;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 6248 6711 . + 1 ID=cds.g8166.t1;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS exon 6935 7995 . + . ID=g8166.t1.exon13;Parent=g8166.t1 NODE_896_length_16097_cov_38.9469 AUGUSTUS CDS 6935 7995 . + 2 ID=cds.g8166.t1;Parent=g8166.t1 #PROT g8166.t1 g8166 MGALSNVWLLVRKNYKTKARRWTIWVEIIAPLAFFIIAVFIRSSLKPKDHAAVYYNSDEFVPYSSTPQIIAFAPNTTWGTIVMNTFATEAASLWRQNMGGPITVQGFATEAALVNTLSLSATGYLGGIVLTNLPISGAEPFPKDISYTIRMCDSCTPQTNTEFATYGGESNGANTNLQYTTYGFLALQLAMDSALSVQFGSGSIVNNTDVSFNRYPYPAYQENTFAQGLSAFLPLFMVLAWLFTVAMTVKDVVFEKEKRLKEAMKMMGLTSTVNWLSWWATAFSFILISIVLMTIITKGGKILEYSDGGVIFVFFFLSGVASISFAFMVSTFFSRASVAAAGGGVIFFLCFVPYLFVGNPVTYADLNQGAKVGLCLLAPSCLGIGGKVFSTFEEEGDGVTWSNVATKENLQNGGGTSMSVVFGMLIFDTLLYALITWYMENAFPGAYGVARPWYFFLTPSYWGCTKRTNANTANVAVMTNASARDERTAANANYEPDPRGLPVGISIAALTKQFDGATKPSVDSLSMNLYEGQITSLLGHNGAGKTTTIAMLTGLFEPTVGDAYVYGHSIRDDIEGVRKSLGICHQYDVLFDVLTVAETLEFFCRLKGVPVERPSTQSSLVHSLRDIRMARRINGEIDAMVADLQLEDKRDARAMTLSGGMKRKLCVGIALIGGSKTVMLDEPTAGMDPYARRATWDLILKHKPGRTIILTTHHMDEADLLGDRIAIMAAGKLQCVGTSLFLKSKYGVGYHMTIVKGHECNEAAVTALVKSHVPQGQLMTDVGLELSYVLPSESSPSFRNMFSEMDARSDEIGISSYGISVTTIEEVFLRVGERAEQAEEEGNIAILAAPGSRVQQKAPASAAPSSMAASDTSVLVEVDGGSGTEKIGGRRVEGRRALFSQQFRAMFTKRLVHSRRDKKAILAQLLAPVIFVLLGMIIVKVFPGKQDQKALLLTVNDIDPYAVYPTPSYKARTSFYQSANASAVSLVESIANVLNGYSSQPGDVPNPMLQVTPFTENAMESQLLLSYNSLRNQFGSYGSYSAVGTGTVGVNVTLWYQNEALHSPPIYLNVLTNALVQRTVPGASITTTNYPLPRSFSNKLDSVNQNGAQFSVGILFIFGLSFSAAYFVNFLVNERCCGAKHLQFLAGVDPGAYWLGSLAWDTLNYFLPLGAMYIVILIFQIDVYTGSNFGAIALLLLGFFWSMLPLMYVASFIPFSGATNAYISLTLANVIMGLGTVITCFTLDALDTAQSANDVLKWIFLVFPPFAMGNGIIQTANQASLNTYLTQAGYPSVAGPLTWNVCGKNIFFLGVSGFVYIALVYILERGWFSLSRPRDPKRLSITANVVELEPDEKRPYGEDDDVAAERARVEAATGAGEMVFVRNLSKVYPAANGQPPKRAVNNVSFGIPPNQCFGLLGINGAGKTTTFKMLTGDFPPTSGEAYLHGYSIATELPEVRKHIGYCPQAIDAMIEAMTGKELLTMFSRLRGIAPDDEKRVVSAWIARLQLEKYADVPCGTYSGGNKRKLSVAVALIGDPPIVFLDEPSAGVDAKARRFLWNTITNVVREGTSVVLTSHSMEECEALCSRLAIVVAGGFKCLGSPQHLKNKFGGAYEIAVKIGDSSEASRRTSAAVRTSGAEGITSFEGAIAVAVDTSAFEAFVSERFPGAIMKEKHDGFLRYEIGRRRGSSFIGGDALGLSASASAPGSARPSASASARGSGAAGLLGPDPLPGNLSLSTIFGELEDARSKFSIEDYSVSQTTLEQVFIRFAKQQASS* # PASA_UPDATE: g4050.t1, single gene model update, valid-1, status:[pasa:asmbl_7405,status:12], valid-1 # PASA_UPDATE: g4050.t1.1.5b6bee88, alt-splice addition, valid-1, status:[pasa:asmbl_7404,status:25], valid-1 NODE_451_length_23473_cov_40.072 . gene 20804 23473 . - . ID=g4050;Name=g4050.t1 NODE_451_length_23473_cov_40.072 . mRNA 20804 23473 . - . ID=g4050.t1;Parent=g4050;Name=g4050.t1 NODE_451_length_23473_cov_40.072 . five_prime_UTR 23472 23473 . - . ID=g4050.t1.utr5p1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . exon 23169 23473 . - . ID=g4050.t1.exon1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . CDS 23169 23471 . - 0 ID=cds.g4050.t1;Parent=g4050.t1;5_prime_partial=true NODE_451_length_23473_cov_40.072 . exon 22664 22835 . - . ID=g4050.t1.exon2;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . CDS 22664 22835 . - 0 ID=cds.g4050.t1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . exon 22230 22400 . - . ID=g4050.t1.exon3;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . CDS 22230 22400 . - 2 ID=cds.g4050.t1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . exon 21735 21902 . - . ID=g4050.t1.exon4;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . CDS 21735 21902 . - 2 ID=cds.g4050.t1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . exon 21112 21439 . - . ID=g4050.t1.exon5;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . CDS 21279 21439 . - 2 ID=cds.g4050.t1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . exon 20804 21059 . - . ID=g4050.t1.exon6;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . three_prime_UTR 21112 21278 . - . ID=g4050.t1.utr3p1;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . three_prime_UTR 20804 21059 . - . ID=g4050.t1.utr3p2;Parent=g4050.t1 NODE_451_length_23473_cov_40.072 . mRNA 20804 23473 . - . ID=g4050.t1.1.5b6bee88;Parent=g4050;Name=g4050.t1 NODE_451_length_23473_cov_40.072 . five_prime_UTR 23472 23473 . - . ID=g4050.t1.1.5b6bee88.utr5p1;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . exon 23169 23473 . - . ID=g4050.t1.1.5b6bee88.exon1;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . CDS 23169 23471 . - 0 ID=cds.g4050.t1.1.5b6bee88;Parent=g4050.t1.1.5b6bee88;5_prime_partial=true NODE_451_length_23473_cov_40.072 . exon 22664 22835 . - . ID=g4050.t1.1.5b6bee88.exon2;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . CDS 22664 22835 . - 0 ID=cds.g4050.t1.1.5b6bee88;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . exon 22230 22400 . - . ID=g4050.t1.1.5b6bee88.exon3;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . CDS 22230 22400 . - 2 ID=cds.g4050.t1.1.5b6bee88;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . exon 21735 21902 . - . ID=g4050.t1.1.5b6bee88.exon4;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . CDS 21735 21902 . - 2 ID=cds.g4050.t1.1.5b6bee88;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . exon 21174 21439 . - . ID=g4050.t1.1.5b6bee88.exon5;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . CDS 21279 21439 . - 2 ID=cds.g4050.t1.1.5b6bee88;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . exon 20804 21093 . - . ID=g4050.t1.1.5b6bee88.exon6;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . three_prime_UTR 21174 21278 . - . ID=g4050.t1.1.5b6bee88.utr3p1;Parent=g4050.t1.1.5b6bee88 NODE_451_length_23473_cov_40.072 . three_prime_UTR 20804 21093 . - . ID=g4050.t1.1.5b6bee88.utr3p2;Parent=g4050.t1.1.5b6bee88 #PROT g4050.t1 g4050 GGNAAKSSVIGGGLSVRCVLNDADGNVIAAPADPAPARTFTCTTLHGGYQNEGFIFCSGRFLIDPDAPGNADGATLSYKFGSTLDGADYLVARITANGFIKVVLSQDESGDNVVTTLIANTAVTGDPAFSGKLVLGSTTGLSSLSCKATVEPFFLDKPAVNCAYGNFGAYSNCTVPCGSGTRTRTRVVTTEGKNGGIACDAALLSESEACNTTPCPINCAYGAFGPFSNCTAECGGGNRTKERVITTEGQFGGTECTEPLSVTETCNSEPCANNCKREVKCFCALKKKFAQQEQSCTPTNRRRRESYMMDWNLDLDLSPERGFN* #PROT g4050.t1.1.5b6bee88 g4050 GGNAAKSSVIGGGLSVRCVLNDADGNVIAAPADPAPARTFTCTTLHGGYQNEGFIFCSGRFLIDPDAPGNADGATLSYKFGSTLDGADYLVARITANGFIKVVLSQDESGDNVVTTLIANTAVTGDPAFSGKLVLGSTTGLSSLSCKATVEPFFLDKPAVNCAYGNFGAYSNCTVPCGSGTRTRTRVVTTEGKNGGIACDAALLSESEACNTTPCPINCAYGAFGPFSNCTAECGGGNRTKERVITTEGQFGGTECTEPLSVTETCNSEPCANNCKREVKCFCALKKKFAQQEQSCTPTNRRRRESYMMDWNLDLDLSPERGFN* # PASA_UPDATE: g4046.t1, single gene model update, valid-1, status:[pasa:asmbl_7406,status:12],[pasa:asmbl_7409,status:12], valid-1 NODE_451_length_23473_cov_40.072 . gene 374 3080 . + . ID=g4046;Name=g4046.t1 NODE_451_length_23473_cov_40.072 . mRNA 374 3080 . + . ID=g4046.t1;Parent=g4046;Name=g4046.t1 NODE_451_length_23473_cov_40.072 . five_prime_UTR 374 709 . + . ID=g4046.t1.utr5p1;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . exon 374 810 . + . ID=g4046.t1.exon1;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . CDS 710 810 . + 0 ID=cds.g4046.t1;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . exon 993 1137 . + . ID=g4046.t1.exon2;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . CDS 993 1137 . + 1 ID=cds.g4046.t1;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . exon 1287 3080 . + . ID=g4046.t1.exon3;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . CDS 1287 2387 . + 0 ID=cds.g4046.t1;Parent=g4046.t1 NODE_451_length_23473_cov_40.072 . three_prime_UTR 2388 3080 . + . ID=g4046.t1.utr3p1;Parent=g4046.t1 #PROT g4046.t1 g4046 MADVEIEDRKPFLSVPLAVSSQRAVPAFLQKLFSMVDDEKNSFCIGWSNKGQNFLVINAERFSKDVLPLYFKHNNFASFIRQLNMYGFSKVTSVRKGMVQGPPHAWEFSHQYFRKGHPDLLCHINRKTYSGSAPASAASPAPTPAPAMGSSPVSGEAKTARTSTAPTIKKEPSSLFAVPAALQQPAMPQAQAQAQAQARVQSDDRSDAAMSTADPSEMQRELEEMRHQQVELQGVIDELRAENRKLWQQQEETNRAQEQMIQRIVSFLATVYSSDKVRSPLATELSLVDGGESSALSLLPAHAAHVAQELQEQLEAMGSPTHQDAYASPPAEENVAQPVSDALFDFDAAGYDELSNTGIIDPLAVTSLSGAPSPYSVCDLTGAMDAAEDIEMSDIGMSSGNCSFEDEYNEDLWRFDEFRNAPSACKVEAMADDVRRQGAYSAQQLMSM* # ORIGINAL: g4048.t1 original gene structure, not modified by PASA NODE_451_length_23473_cov_40.072 AUGUSTUS gene 10929 13669 . - . ID=g4048;Name=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS mRNA 10929 13669 . - . ID=g4048.t1;Parent=g4048;Name=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 13471 13669 . - . ID=g4048.t1.exon1;Parent=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 13471 13669 . - 0 ID=cds.g4048.t1;Parent=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 12024 13309 . - . ID=g4048.t1.exon2;Parent=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 12024 13309 . - 2 ID=cds.g4048.t1;Parent=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 10929 11735 . - . ID=g4048.t1.exon3;Parent=g4048.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 10929 11735 . - 0 ID=cds.g4048.t1;Parent=g4048.t1 #PROT g4048.t1 g4048 MKSSRVGLFFAAIVAITASAPLAVADPNYQACVDVAAKALPYCDVHLSHDERVKDLLSHLTLDEKIGLISPDPSLNTCNMMTKAIDRIGLPQYMWLVETNTGVASNCLNSKQCATTFAGPEGLAASFNRTVWRSKGDVISTELRAMSNANWHRGQGPIYLIGFDGFGPNMNIARDPRFGRNSELPGEDPLLTGAYASEYVQGMQQVDDAGFVKMIAYVKHFDAYSVELNRGHDNHNISAYDFSDTYLPAFERVFVEGKASGAMCSYNAENGRPSCANGWLLNDVMRGEWGAEDAVVMSDCGAISNLLGAPANAPSEAVAAAWAINNGTDIEAGSTVWTEHLRDAVDAGLTTEAAVDASARRAMLQLMRAGRFDAPESVSWTKIGPDVIDSDHHKAVNYEAALQSFVLLKNEGGVLPLREGSVVAVVGPQGVSTYGLLEDYYGDDVCFDGGFDCFPSIAAAVTSLNGAEYTLSTKGVDINSNDTSGIEVAVEFANKAEVVILVLGIDKTVEYEGADRTSIALPGEQEALARAVLSTGKPTILVLVNGGALAIDSLIDGPRAIVEAFNPGKEGARALADTLFGRRNRWGKLPITVYPAAYVTQVDLNDFSMTKAPGRTYRYYTGTPLFEFGHGLSLTTFVVNCTDDATNVPVAHARNSVVRVSCAVHNGGAIAGDEVVLVFHRPSLALRNAVGDKHPVPLKRLVAFERVSVEPNKTERLTFEIVVADALSLTDATGAKVVYEGAHELVVSHGVPGDELTFPVNVV* # PASA_UPDATE: g4047.t1, single gene model update, valid-1, status:[pasa:asmbl_7407,status:12],[pasa:asmbl_7410,status:12], valid-1 NODE_451_length_23473_cov_40.072 . gene 3730 10280 . + . ID=g4047;Name=g4047.t1 NODE_451_length_23473_cov_40.072 . mRNA 3730 10280 . + . ID=g4047.t1;Parent=g4047;Name=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 3730 3906 . + . ID=g4047.t1.exon1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 3730 3906 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 4182 4706 . + . ID=g4047.t1.exon2;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 4182 4706 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 4942 5169 . + . ID=g4047.t1.exon3;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 4942 5169 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 5349 5489 . + . ID=g4047.t1.exon4;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 5349 5489 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 5877 5993 . + . ID=g4047.t1.exon5;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 5877 5993 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 6273 6401 . + . ID=g4047.t1.exon6;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 6273 6401 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 6667 7674 . + . ID=g4047.t1.exon7;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 6667 7674 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 7868 8032 . + . ID=g4047.t1.exon8;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 7868 8032 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 8184 8336 . + . ID=g4047.t1.exon9;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 8184 8336 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 8654 8930 . + . ID=g4047.t1.exon10;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 8654 8930 . + 0 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . exon 9220 10280 . + . ID=g4047.t1.exon11;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . CDS 9220 9755 . + 2 ID=cds.g4047.t1;Parent=g4047.t1 NODE_451_length_23473_cov_40.072 . three_prime_UTR 9756 10280 . + . ID=g4047.t1.utr3p1;Parent=g4047.t1 #PROT g4047.t1 g4047 MSDRQLSRQFSAPDTSASRPYDISASLPSSALRELQQAPAKSPQRTTMQRISNLGGSPSRQKMYKNRMDLTAIPSGSPETPRSRPSFMRINSEKSFLSKSMVAPTTPSFLSPFDRLKGGNFSATFSSSNLSSVVGDSMDFLSTYPAPFRGRFREREVGSDPDLNASLSMTGGSDTFRDSKVSGDALHSFNFSPGYKLHGAAPRSQTPMGLNASLTASWLNSSFVSTGMLGANVQIQVVNPNKALITVEGSSLSILVANDKACEMFGYERGELVGLKMRHLLAAPYEEKQRAMMEQHIDTRGEVVVVSGKVVDVVTKKGEQFPVSLWMKKVTQDGEARFIVIIEKVERLDSSAEVNEEGYVISADSSFAQLFGYTPDEIYAVPVTDLLPTVVVPDTQDTEGRIGKKQRLSGKTKDGLVFPVSVITSSVDGSHCAIRITIQVYANLSGMVTFDSNGIIQTCNHNFTRLMFGYAQADLVGRHVSFLLPDFKGGLREGDDSDLDSSEDSHHRVPGVKGRPNTEMDRAKSPKKQRRELEVMDLDFDSRVRSHSDPTIGSAPRLVPQSTPLRSTSADRTGSTSDTLGHHDDDDGDAAEAAFLRRGICGLDDDPIAEGNYRTQARHKDGQFIAVVFQVKRVSTDAGATLFCAWITRDIEAAAAAAAASHTSIGGIAGVLFPDGQQHPAERIPEGAEPGDDEYDEDGDERGDDSRQGLGSLTQSDLDTTGTSVLGGHSLLLATGDEEQLGRGPFDDHYKAIHSIGKGAFGFVKMAVRLSDGEHFVVKYIRKEKVLQDNWIDDPVLGRIPLEIHLLRRLNHPNIVKCVDVYENEKFFQMVMERHGPGIDLFEYIEDNPDISEALASYIFRQLASAVSYLHSQNIIHRDIKDENIILDEQFNIKLIDFGSAAFMAPGKVFSTFCGTLEYCSPEVLLGTKYPGPQLEMWALGVTLYTVVFAENPFFDVDESILGKLNPPFDPTPECTHLLRWMLNVDPKKRATIADVLEHPWVNQPVEFLSPATSGTVGGPGADATHSSPAQLPASRPVGPHSAQTHGMVPAQTQSRVTADAHSDTAVPEPRVNTLFQQPLPPSGQSGRQLQPHSADATAIATRARAGSYEDEDMAQYDADATETASEGGRSGASTPTQLYDEYRKFLGDTS* # ORIGINAL: g4049.t1 original gene structure, not modified by PASA NODE_451_length_23473_cov_40.072 AUGUSTUS gene 14326 19757 . + . ID=g4049;Name=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS mRNA 14326 19757 . + . ID=g4049.t1;Parent=g4049;Name=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 14326 14377 . + . ID=g4049.t1.exon1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 14326 14377 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 14588 14694 . + . ID=g4049.t1.exon2;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 14588 14694 . + 2 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 14888 15134 . + . ID=g4049.t1.exon3;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 14888 15134 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 15334 15468 . + . ID=g4049.t1.exon4;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 15334 15468 . + 2 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 15717 15988 . + . ID=g4049.t1.exon5;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 15717 15988 . + 2 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 16246 16356 . + . ID=g4049.t1.exon6;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 16246 16356 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 16498 16868 . + . ID=g4049.t1.exon7;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 16498 16868 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 17112 17238 . + . ID=g4049.t1.exon8;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 17112 17238 . + 1 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 17516 17703 . + . ID=g4049.t1.exon9;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 17516 17703 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 18054 18159 . + . ID=g4049.t1.exon10;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 18054 18159 . + 1 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 18388 19340 . + . ID=g4049.t1.exon11;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 18388 19340 . + 0 ID=cds.g4049.t1;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS exon 19595 19757 . + . ID=g4049.t1.exon12;Parent=g4049.t1 NODE_451_length_23473_cov_40.072 AUGUSTUS CDS 19595 19757 . + 1 ID=cds.g4049.t1;Parent=g4049.t1 #PROT g4049.t1 g4049 MGNSSSKDRAVFERIDHGNKGYLTLGNLVAAHNSGEDFRIATELPLGSAVLFQFDKDKDGRLSAVEFSRLLRRVRLAEAYVGKRKQNALRRRRWGWLPRFLRRLMRLDDGAEKLFHRQRKRRARRVWVAYNREIGGDANEAVHPFAADGSAEENRTHAMVEDAYVPMLSGMGQESEENGKDLSVGRMWYVCTSVSDDEDREQRAFDAATSERGNSRASGVTDGNGDQLNAADSLFRFYVGVVLNHKPRARLRRLLKSKKGQKRYVEWIYRLAEPSMDDGSVPIDNVRTLLTSIASDGIRLEKLLGRKEHAAADLSRSPADRVIDAIRRMADPPSTPGSPNSSNARSQKRTHSRRGTTDADAAAAAATRGDDCDAAESVERALSVVSAAVMAKEGRASGTGSGDNVPHKLAASGAFGDIRPKGKGAQSVDPAKTLESIPLVESAAPGDNQLSKAQFVMLAVRILEEMVASFARDSVGHVVGDYDIGRAIGRGSGGTVWRATDTRTGELRAVKAIDKGNVASMSKVDTEIKAMATLRHKNVVSLDKVLQSEDCIFLVMELCLGGSLADLVLDAQRPLSERRARFYLRQIADGLEYCHSLGVCHRDLRAENVLLDATGTVVKIADFGHAGLCGQGSWDMFSTTLVGSLGYVSPEQLRGECYSGRKLDIWALGVILFYMLAGRLPFYDDNMRTFIRLVQEAAPEYPPEFPEGAKSLVASLLRPVFSDRASSSDVLKHPWVVAGEADVPLSRSGSALSGDSVGSGGSPFASLHRLSGLSGAVNDARDIPLVGTATAPEGHAAHIPTAEEVGQREPLAGHVRAPAASLWHGDAFATAMEGVAREGDFQRTGSVSSASGRTVRYVGARGVIQGTAAEASTGLARRQSLLLPELSAHPMLADGPMSDAAPDETDSVEASDDDGDFIGPDSEDSDDSDHAEGFVARGGRLKR* # PASA_UPDATE: g3100.t1, single gene model update, valid-1, status:[pasa:asmbl_7938,status:12], valid-1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . gene 181 967 . + . ID=g3100;Name=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . mRNA 181 967 . + . ID=g3100.t1;Parent=g3100;Name=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . exon 181 423 . + . ID=g3100.t1.exon1;Parent=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . CDS 181 423 . + 0 ID=cds.g3100.t1;Parent=g3100.t1;5_prime_partial=true NODE_5213_length_967_cov_55.6256_potentialcontaminant . exon 541 667 . + . ID=g3100.t1.exon2;Parent=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . CDS 541 667 . + 0 ID=cds.g3100.t1;Parent=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . exon 842 967 . + . ID=g3100.t1.exon3;Parent=g3100.t1 NODE_5213_length_967_cov_55.6256_potentialcontaminant . CDS 842 967 . + 2 ID=cds.g3100.t1;Parent=g3100.t1;3_prime_partial=true #PROT g3100.t1 g3100 VDDAVASPHRGSDRSICTPSLSPTHHSKTSTVSHFSFTPVHNVSAVDPVMPRAEKIAIRRQSRLNRMAEIDAEQKALTGHRSSPLQRQLVFSMYMLWNVALAVSMALQVLANIFTLLIAILGDRQYLKTGSSFVFGVTSTSMFGSFGAIAEISLVLYPSTSSIFF # ORIGINAL: g12722.t1 original gene structure, not modified by PASA NODE_1315_length_12180_cov_37.3687 AUGUSTUS gene 10996 12133 . + . ID=g12722;Name=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS mRNA 10996 12133 . + . ID=g12722.t1;Parent=g12722;Name=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 10996 11089 . + . ID=g12722.t1.exon1;Parent=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 10996 11089 . + 0 ID=cds.g12722.t1;Parent=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 11313 11482 . + . ID=g12722.t1.exon2;Parent=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 11313 11482 . + 2 ID=cds.g12722.t1;Parent=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 11657 12133 . + . ID=g12722.t1.exon3;Parent=g12722.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 11657 12133 . + 0 ID=cds.g12722.t1;Parent=g12722.t1 #PROT g12722.t1 g12722 MLAPSVGVALRTALLARPLSDNAVRVATGQRGFRNIAACMASNKKHSWAAPAKRKTHVETPADVKSIQDGKAVLKKKIDAAKLNTKLEFMPTRINRGTDFSVGGVFERHKAELQKITNSRNSLSLYGQSAAYRELTKEIKAAISESKPNKNKRETDTPTGAQSADTGDLEEEDDREGDDSDDERGNVDDDDDVDDAESELKEEDDGEDPDFDELTPEEKEIEGVAFDILQVCAWCCSLLAWIGVIA* # ORIGINAL: g12719.t1 original gene structure, not modified by PASA NODE_1315_length_12180_cov_37.3687 AUGUSTUS gene 707 4856 . - . ID=g12719;Name=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS mRNA 707 4856 . - . ID=g12719.t1;Parent=g12719;Name=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 4794 4856 . - . ID=g12719.t1.exon1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 4794 4856 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 4576 4665 . - . ID=g12719.t1.exon2;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 4576 4665 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 4116 4307 . - . ID=g12719.t1.exon3;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 4116 4307 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 3936 3993 . - . ID=g12719.t1.exon4;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 3936 3993 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 3521 3581 . - . ID=g12719.t1.exon5;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 3521 3581 . - 2 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 3294 3354 . - . ID=g12719.t1.exon6;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 3294 3354 . - 1 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 3033 3087 . - . ID=g12719.t1.exon7;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 3033 3087 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 2758 2879 . - . ID=g12719.t1.exon8;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 2758 2879 . - 2 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 2272 2447 . - . ID=g12719.t1.exon9;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 2272 2447 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 2035 2104 . - . ID=g12719.t1.exon10;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 2035 2104 . - 1 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 1680 1840 . - . ID=g12719.t1.exon11;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 1680 1840 . - 0 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 1387 1484 . - . ID=g12719.t1.exon12;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 1387 1484 . - 1 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 1108 1201 . - . ID=g12719.t1.exon13;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 1108 1201 . - 2 ID=cds.g12719.t1;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 707 840 . - . ID=g12719.t1.exon14;Parent=g12719.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 707 840 . - 1 ID=cds.g12719.t1;Parent=g12719.t1 #PROT g12719.t1 g12719 MLWKVTIPTASVVRTGSKEHVAFDIHFSEPHLEYNRVTSRRYSELRAFHEWVVATFPEAAATNLHFPGKKTFSQMSKNFVETRRQQLEAYFQLLCGIDVLWKSVAFKDKLDITVDGEIYSTMSICAVCTIKLRKGLTWIPGTVYRRDNEVYLVARCPSHGDKETLYCSNADYFRKMVRYSLPGNAITELYVPLGTYNNVASIKAASQLSPASQNVPCTFDVSVFEDGKFVSDADCKLAADMATLNARVLFVESSASATLPAPILVEASFDRIVELTRLDDSCFFRRRIFPAIKYYLQRGEETRCLSELRQVIVAIETITGLQCMLTLCVERPFPALDEIIALIRENSAIIRLAMIVLERPMREIVSAMESHPMLASQSKPSVDVYELLQTIDKSTAGSIKAEDFMPIAITLNIEPFLNIMGWGRYMLRVAPTFGVGTILVTTESQGSVPLPRVMDVDRFCEDTAPLLVQLDASPSKEL # PASA_UPDATE: g12720.t1, single gene model update, valid-1, status:[pasa:asmbl_1179,status:3], valid-1 NODE_1315_length_12180_cov_37.3687 . gene 5330 8452 . + . ID=g12720;Name=g12720.t1 NODE_1315_length_12180_cov_37.3687 . mRNA 5330 8452 . + . ID=g12720.t1;Parent=g12720;Name=g12720.t1 NODE_1315_length_12180_cov_37.3687 . five_prime_UTR 5330 5538 . + . ID=g12720.t1.utr5p1;Parent=g12720.t1 NODE_1315_length_12180_cov_37.3687 . exon 5330 8452 . + . ID=g12720.t1.exon1;Parent=g12720.t1 NODE_1315_length_12180_cov_37.3687 . CDS 5539 8364 . + 0 ID=cds.g12720.t1;Parent=g12720.t1 NODE_1315_length_12180_cov_37.3687 . three_prime_UTR 8365 8452 . + . ID=g12720.t1.utr3p1;Parent=g12720.t1 #PROT g12720.t1 g12720 MAEGERVPQRQIITATLARVISDKEVAENTFAHIDYHAHRRLLAACSGKVCCLWDGDWNPLHRFGRTEGSIHKARLRYCKFSKDGGFLLTCGDDKKIVVWNVDERRAEAVLTGHKDTVTCLKLSKDGDKLFSSSADGVVMAWDWKTGTLLGPIARHAASIRSFDMTLDSVRLICGQNDGRVDVWNLSEERRIDCIEPDAIWDPSDQQQRTEGAIGRGWIDGTSHHTGSICAVAISPNVRIIATASNDCTCKLWDVISYSKDAATIDREKKEAAEVDGHRLLNLAMDETATEQPDPRGNELRIGAVPVVAGYHADILYTLKHEAPCYALQFTADAKTIVTGSQDATCRIWSVATGDLLFQINTPASVASLLYVESMRSLLCASGNRIIVLSVCRHSEARSLPSYWQRQQDPAEHALATRHTDDKREASTSSSPTQHIHEARLTRVSDEEYGMGRPLPPSEVDQSRTFSTDARSSAVAFARPKEIRRSDLVRFLAHGTISAAFLSAMVLQFPGVSWATLQRNMRACQFGPKALLRVLARSSFKAADLLTALSSPDNAIPMFDALKRGAPIHTEMARRGFRPLAPGDEDEDIVWVDAKPALAAPTQPAPHLPAPTPAPSISSRLPPAPLPLMRILPLGRPLQQPKTGTICKYKPSEIMRLMARQPGVANNGIIGSGQLARNAPPKHLAPLLGSQSSRGHNGGDHMNPTQQQHYNLQRVPTQDHDQLHGGDHAEDGCDTGTMATGIGAPPPSGRGVHDRTHGHVPKPPFPEPQPHEVHYIAPHDPHRADSLVPLSLQTANGGTAPKDHVTVRRQHMSHFNNKPAPGSAAFLAEQLARHEMRYEDTIAEGRIVHPPISTASNPLYERALGPLEAVYASVADMDSHAFVAATEEELRRALMSAHNPEPSLNGEDAREDASPPPQHHASPTPQKAPKPTRCVDCIRVC* # ORIGINAL: g12721.t1 original gene structure, not modified by PASA NODE_1315_length_12180_cov_37.3687 AUGUSTUS gene 9644 10486 . - . ID=g12721;Name=g12721.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS mRNA 9644 10486 . - . ID=g12721.t1;Parent=g12721;Name=g12721.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS exon 9644 10486 . - . ID=g12721.t1.exon1;Parent=g12721.t1 NODE_1315_length_12180_cov_37.3687 AUGUSTUS CDS 9644 10486 . - 0 ID=cds.g12721.t1;Parent=g12721.t1 #PROT g12721.t1 g12721 MASAGGGAMSQPPIARPHPPPRPRGDPPGRSPRRPPLIADPSSLRSAVVFGAIVGRGVEDGSSRSHSPAGRVKAPSELERAPSRIDSAGDAVINPYITLPSIGSTQMSEEDVMVPQMPARVRLRGMRPTGGTVNVLDANVIPSAQRVAAVAIESEAVPKPPTEKRIEGPNGSRVRRAVAGRHTNPSDAAREPLPDEPAAGDADAVSIAVRLQDGRRLQRRFRKSDKVSDVVRFVQEQGIPRLTLVGNGAPAVRYTATSQTLEAAGIDQRALLLAEEPKKR* # PASA_UPDATE: g8548.t1, single gene model update, valid-1, status:[pasa:asmbl_863,status:12], valid-1 NODE_1224_length_12914_cov_54.3837 . gene 3943 7427 . - . ID=g8548;Name=g8548.t1 NODE_1224_length_12914_cov_54.3837 . mRNA 3943 7427 . - . ID=g8548.t1;Parent=g8548;Name=g8548.t1 NODE_1224_length_12914_cov_54.3837 . five_prime_UTR 7300 7427 . - . ID=g8548.t1.utr5p1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 6990 7427 . - . ID=g8548.t1.exon1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 6990 7299 . - 0 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 6667 6805 . - . ID=g8548.t1.exon2;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 6667 6805 . - 2 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 6320 6431 . - . ID=g8548.t1.exon3;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 6320 6431 . - 1 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 5699 5785 . - . ID=g8548.t1.exon4;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 5699 5785 . - 0 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 5129 5244 . - . ID=g8548.t1.exon5;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 5129 5244 . - 0 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 4627 4743 . - . ID=g8548.t1.exon6;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 4627 4743 . - 1 ID=cds.g8548.t1;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . exon 3943 4387 . - . ID=g8548.t1.exon7;Parent=g8548.t1 NODE_1224_length_12914_cov_54.3837 . CDS 3943 4387 . - 1 ID=cds.g8548.t1;Parent=g8548.t1 #PROT g8548.t1 g8548 MHPLGVLYVCAVAALFLSVADGADSNGTSDAAYTGSSAANAVPGVTDVSPPARESWDDLPIFSKVHTAIRFKRRLDTCDEEDMSISESISRVIYASGGFNPSNGEPKRHTKQGSKSMRLVGPRVSRPLIPTDAFSVDLRANRMAVPYPQAVSAPRTSYMCYFREVPTDKKRHIVMVEPILQKENSRKVHHVLVYECDDVDESELDYAGACYDDAAPSTARCSFGRPVLAAWAVGGENFYYPAEAGYPIGGDVPQKRKHVLVEVHYDTPDMLPFEDSSGVRLWVTETLRPHDAGGFRLKQPRYPVFFLTCGGSRQYNIKRDIRCNSVENALLFAKAQRLLGIVTNSRPILSNMSLIPFIKSEGLVLFTWGDDNNSDENIRKQKAAGVDAVIYDRINDFKAEKKNVFEVEELARSAKRKRDGEAEHEATVTQSPKALRHADAN* # ORIGINAL: g8549.t1 original gene structure, not modified by PASA NODE_1224_length_12914_cov_54.3837 AUGUSTUS gene 8143 10751 . + . ID=g8549;Name=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS mRNA 8143 10751 . + . ID=g8549.t1;Parent=g8549;Name=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 8143 8227 . + . ID=g8549.t1.exon1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 8143 8227 . + 0 ID=cds.g8549.t1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 8884 8948 . + . ID=g8549.t1.exon2;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 8884 8948 . + 2 ID=cds.g8549.t1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 9241 9353 . + . ID=g8549.t1.exon3;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 9241 9353 . + 0 ID=cds.g8549.t1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 9445 9582 . + . ID=g8549.t1.exon4;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 9445 9582 . + 1 ID=cds.g8549.t1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 9870 9978 . + . ID=g8549.t1.exon5;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 9870 9978 . + 1 ID=cds.g8549.t1;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 10251 10751 . + . ID=g8549.t1.exon6;Parent=g8549.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 10251 10751 . + 0 ID=cds.g8549.t1;Parent=g8549.t1 #PROT g8549.t1 g8549 MLGISRGLLRGARRGVLTTKKGPIGYYKGRYIIVPSKIPEIVVPDLSTTELRPYVGRGGEYVKVAPPTAEDYMPLIRQQGVDLKHVRSMVRHAISALPKSTTEKLFAAESKINQRLARTKRIEAEKLEAKLRKLPPLYFEVKSDDTLRRYGINLTIAQAATEELEIDETDTDYLYDSRRRRLKGKALDDAIAQHEKRKVAAVVEISEEETKAAELRAALDAKLTVSDTDDATADAGDATKTEGETGRTRTVDEDAVLKAAASSLAEWLEAEGAAQKSRQAKPKGLTLRAIAAIEERRKADASAAAATEASGKSLDETARAKEEGKGASPTSTAEKK* # ORIGINAL: g8547.t1 original gene structure, not modified by PASA NODE_1224_length_12914_cov_54.3837 AUGUSTUS gene 134 3108 . + . ID=g8547;Name=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS mRNA 134 3108 . + . ID=g8547.t1;Parent=g8547;Name=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 134 227 . + . ID=g8547.t1.exon1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 134 227 . + 0 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 663 816 . + . ID=g8547.t1.exon2;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 663 816 . + 2 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 977 1127 . + . ID=g8547.t1.exon3;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 977 1127 . + 1 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 1348 1446 . + . ID=g8547.t1.exon4;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 1348 1446 . + 0 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 1737 1857 . + . ID=g8547.t1.exon5;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 1737 1857 . + 0 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 2088 2246 . + . ID=g8547.t1.exon6;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 2088 2246 . + 2 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 2597 2771 . + . ID=g8547.t1.exon7;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 2597 2771 . + 2 ID=cds.g8547.t1;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS exon 2973 3108 . + . ID=g8547.t1.exon8;Parent=g8547.t1 NODE_1224_length_12914_cov_54.3837 AUGUSTUS CDS 2973 3108 . + 1 ID=cds.g8547.t1;Parent=g8547.t1 #PROT g8547.t1 g8547 DSVLSRLADPRAGFLSMIRKRIAQDHMQTYTQHLTKEQQDEYDLLVAKRKSTAKKATSAEAKEKTRKYMSVKRLRLNDAMKAINDGTVSLEEAMKDWSGARIRAYRLIKENPNAYYYRFNDPGEMQRNGGWSKEEHDLFLARLAEIGADGQWGLFAMKIPGRVGYQCSNYYRTLIQNGKIKDENYVLDDKGKAHYLFSTKKPGGSKEIRTFSRKGNGSDEDDGGEPKKRRSSSGSKPKSKKRRRGSDDDDSQDDNLDENGSWKPTQSFYTTKRCRKLKGELVDEDLENAVNPLPGRTDPITLEEVVVPTISPSGHVMSYSSWLQCLAQGGVCPVTKQPVNKKDLVILTMDNIDQYRDKIREG* # ORIGINAL: g14053.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 35960 37693 . - . ID=g14053;Name=g14053.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 35960 37693 . - . ID=g14053.t1;Parent=g14053;Name=g14053.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 35960 37693 . - . ID=g14053.t1.exon1;Parent=g14053.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 35960 37693 . - 0 ID=cds.g14053.t1;Parent=g14053.t1 #PROT g14053.t1 g14053 MVFLSVLQVRKARREKQNDLYAVSQARRDQIERALKADYDFVPDVYLYFPVGVAETNGKRIASAKPSPTADGDDVDVTDLYTHDDAVIDFILETTNLLKAKGITNVATGTYGDPAQSTPVNLRDPMIEKSKCLIVVVTQESLRQASQPVKQAIVVSENPPSGKSIPILPVMFAHGSLPHGMNYHLGNLQQPVFGFTNLGRGAAISDKPEFVWAFERLFRGISLAHEADGDHTKMLELTVNSDLMNVKTNPEFARVYWRYFQTSAKGTDGEMVVVEDDKGSLKASATAAQSVVQQLASDDKGKTPSSSSSVSTALVPALPSIVHEQYGLKITVTGESWMTPDQLRTGLECKAMKEWFRRGGLQLGLLRKPFVLRGIHVQSLDMFGSRVGFLKFKTDLIDGGACPVPGIVFARGDSVAILVLLKARETGCVYTVLTMQPRVPTCQRILELPAGMINDKTGDFAGVAAEEMREETGISIGQNDLFDLTALMNGAAEPHIFPSGGGCDEAMRFFLYRTTLDVAEIGKLQGKMTGVWAENEKIRLHVLPYEEVWRKTMDAKVLCAVALYERGSAAGLIPNMS* # PASA_UPDATE: g14043.t1, single gene model update, valid-1, status:[pasa:asmbl_846,status:12],[pasa:asmbl_849,status:12], valid-1 NODE_121_length_37810_cov_41.5825 . gene 3607 7202 . - . ID=g14043;Name=g14043.t1 NODE_121_length_37810_cov_41.5825 . mRNA 3607 7202 . - . ID=g14043.t1;Parent=g14043;Name=g14043.t1 NODE_121_length_37810_cov_41.5825 . five_prime_UTR 7077 7202 . - . ID=g14043.t1.utr5p1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 6790 7202 . - . ID=g14043.t1.exon1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 6790 7076 . - 0 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 6581 6633 . - . ID=g14043.t1.exon2;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 6581 6633 . - 1 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 6383 6455 . - . ID=g14043.t1.exon3;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 6383 6455 . - 2 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 5982 6157 . - . ID=g14043.t1.exon4;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 5982 6157 . - 1 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 5626 5711 . - . ID=g14043.t1.exon5;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 5626 5711 . - 2 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 5273 5358 . - . ID=g14043.t1.exon6;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 5273 5358 . - 0 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 4772 4928 . - . ID=g14043.t1.exon7;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 4772 4928 . - 1 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 4252 4398 . - . ID=g14043.t1.exon8;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 4252 4398 . - 0 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . exon 3607 4004 . - . ID=g14043.t1.exon9;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . CDS 3852 4004 . - 0 ID=cds.g14043.t1;Parent=g14043.t1 NODE_121_length_37810_cov_41.5825 . three_prime_UTR 3607 3851 . - . ID=g14043.t1.utr3p1;Parent=g14043.t1 #PROT g14043.t1 g14043 MYSLPTRSKSGHWLHICTDPTTCQECGSAPRRAPRVQTVREGDEGQETPAFKETTVETTQTHHTPLPVTGLAGKEMRRPTIISGSSHPDLAKKITEYLNVVPTKVELGKFSNQETAVAVEESVRGEHVFIVQSGFGHSHVNDSLMELLILANACKTACAERVVVVVPYFPYSKQSKKKKARSAIPAKLVADMLKMAGVQHVITMDLHASQMQGFFNIPVDSLYARPLIAKYIRENVPNFQEAVIVSKNAGGAKRATSLADSLRADFAIIHEEEPHTNHKKDKKDAVQKEAEMVLAGDVNGKTAILVDDMMDGSKAFCAAARLLKDRGAVKIYAIVTHGILSGNALDLIAASPIDQVVVTNTIPNEVKAAQCDKIKILDISPLLGEAIRRIYNGESVSFLFEHTPL* # ORIGINAL: g14046.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 13018 13497 . + . ID=g14046;Name=g14046.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 13018 13497 . + . ID=g14046.t1;Parent=g14046;Name=g14046.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 13018 13497 . + . ID=g14046.t1.exon1;Parent=g14046.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 13018 13497 . + 0 ID=cds.g14046.t1;Parent=g14046.t1 #PROT g14046.t1 g14046 MICAMYISPVSRSVSPSSRPIVLRDNGAGRTSEVLTLKSATALSTQCPPSTPPRQQDDMRLLDKQLRSSRIQRIPRSNLLDILAAAKARRMNPRCGAGNSQASTFGSGGMTAPPLCDTPGFRAQSVRAMPVVRDCVGMENRSVAVDVNLPSFAGTGDPS* # ORIGINAL: g14049.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 19673 23510 . + . ID=g14049;Name=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 19673 23510 . + . ID=g14049.t1;Parent=g14049;Name=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 19673 22252 . + . ID=g14049.t1.exon1;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 19673 22252 . + 0 ID=cds.g14049.t1;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 22435 22588 . + . ID=g14049.t1.exon2;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 22435 22588 . + 0 ID=cds.g14049.t1;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 22835 22915 . + . ID=g14049.t1.exon3;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 22835 22915 . + 2 ID=cds.g14049.t1;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 23089 23195 . + . ID=g14049.t1.exon4;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 23089 23195 . + 2 ID=cds.g14049.t1;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 23448 23510 . + . ID=g14049.t1.exon5;Parent=g14049.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 23448 23510 . + 0 ID=cds.g14049.t1;Parent=g14049.t1 #PROT g14049.t1 g14049 MRTIRAYHMATISHEVDEDEAKTLTAEMLEFVRRMEAGAMRAAKEMINAGFVESADDEAISVKDARIIAAMMDTKNKTVRRKDYELVRDVDGQRLNVSGGPGIRRIGSAPPASTKDASEGELGLAESAQRQAMEAEMAALRVKLDSLQSRLDLKERELAATKKSLETHSAQATVISKTNTRQEHDVDRLHKEVAVATDRIAMLNDRINALEAELRSVRSRYDQEQRAAELARTERDRVQVLVEERDDQLTAAKGKISALSRALKDAMERSAPEQDHKTAAVASDGGGRRASQPEVLPKSISMGSEASIGASAPNNTVVSHNDVSVLSSAGGGSKERLATVSFADAVVQPHHQQQQQSPATVGKSAASEKSLENLSQESSRKSVDDKSTEPSARLVSSFTMDSAQQAEHGAPQRSSTPVKRQTRSPSSPGSNPRMSAHGTRRDAERHPMGVIVVTGGAEPWCDDTGLVMLCALQRIMEVRVVAVVTEPNRIASVRQIMHDLGYARIPVGSEIGFPGVSGRREGTDVDSMFYKTLARSADKSLTVIACCGLGVVSNLVSRERALFASKVERVFAVCNVHTVPMMNGVVAIQPDGPIYGPDIAVQDMYSTLQALGVATTTIVPDALHSVMLPRKVYDDMADVGRLGIGATIRAGRKNQLTSLYKIACAQQDSANRGAVPSAIDQEWFLARYCGGGIAVGPSSALTSGASSSSGDRAGSARAIWRHVVCVDEPAAVAIVASMPELCNRFFVVQRHIVNGVAHEIIGPSADASVSLPASLGVANMRVLAAFVGDTLVTAMSEGIEAKNVPEMSVRNRLSAAKDNMLRSTFPVAKEKSRKKKGQPKYETVTLGTRGSASPDVQHTQQAGCPCTVCKGSRLPEALAAQMERSKNWEASNALRGHIKLGDRVQLDGGLLGFVKYVGRVDSDYIDYQTYVGVKLDDPAGDCDGVYKGKRYFTCPDKHGMVVPVSRIASVYVPKSMTFQPSFKSWRLTNPKADA* # ORIGINAL: g14044.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 7548 10485 . + . ID=g14044;Name=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 7548 10485 . + . ID=g14044.t1;Parent=g14044;Name=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 7548 7796 . + . ID=g14044.t1.exon1;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 7548 7796 . + 0 ID=cds.g14044.t1;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 7891 8003 . + . ID=g14044.t1.exon2;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 7891 8003 . + 0 ID=cds.g14044.t1;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 8563 9795 . + . ID=g14044.t1.exon3;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 8563 9795 . + 1 ID=cds.g14044.t1;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 9957 10485 . + . ID=g14044.t1.exon4;Parent=g14044.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 9957 10485 . + 1 ID=cds.g14044.t1;Parent=g14044.t1 #PROT g14044.t1 g14044 MAASVSQVDEEEAQKWLRKCKSWVDALQRPTVRASGGTATDSAGVTLHDPGVLAVARAMEECDVDADELTSFLSRIQVRLHQLGNAQRALDVIPSIGKLLGKLCVCDIVLANRRINEAVISQSEAFADPAKTTFDVPPTPFTERITKILLLFVPSEPRLIPVFHDALQFGGTPQLVPRGHSDPNAHNGNANIADDSPHPGFITLLDGPLRAAILGTASPAALAGYWNANPDAFEAELARLFSHMVACRPLMLPDTLARLLDSGMNMHADTSCVDAASQSVEPFALPIFGALAVDHELLYLMERDLCGAIAQSAGDCRVLKCNAAFGEALASHFVESSTSIATECENIDSHREPIVSSLCNDIEAALCTSLNGISGGKAVRNSGEALTRVATALQCAISEQTQLHTGNIVDVVCEGIDGECGASDCIVCGVDAATVSASRKRRRVTHPCSRTLGKKEWWRPTTRRYESARDWIRYSLCRYPWVHHAAIRSVCAGMSGAGDWTAAVFILRVWYGYAKEDEESLSKLLAIAVDRKADVTTFEGMHDLHPCMLSSVFFQLASEKDSHPDMTLSSCIACIDTHKKTFVKGAENTDASEPKVINTAKRHCPLSVCEMIHIVDTLESNTPSRIRTSFVRDVVDAIANTLQIHSTTTMSQERTSEGSGQVHGCAIGREGRDDVRERLRRIIAIVEFENNSRAVLEAALCEPESPQ* # ORIGINAL: g14052.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 34791 35288 . - . ID=g14052;Name=g14052.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 34791 35288 . - . ID=g14052.t1;Parent=g14052;Name=g14052.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 34791 35288 . - . ID=g14052.t1.exon1;Parent=g14052.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 34791 35288 . - 0 ID=cds.g14052.t1;Parent=g14052.t1 #PROT g14052.t1 g14052 MSSPQPRLDAAKTESLVRRAIDVAASARSHGNHPFGAVFYDPVEDKIVCEAENTVVTETDATGHAETNLVRKVCKQSADVIGRGILVTSTEPCAMCSGAIYWAGINAVVFGLTEEHLYEITGANPENPTLLLPCKRVFECGQRPIVVEGPVLEEDARRVHEGFWH* # ORIGINAL: g14047.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 14309 15026 . + . ID=g14047;Name=g14047.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 14309 15026 . + . ID=g14047.t1;Parent=g14047;Name=g14047.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 14309 14544 . + . ID=g14047.t1.exon1;Parent=g14047.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 14309 14544 . + 0 ID=cds.g14047.t1;Parent=g14047.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 14633 15026 . + . ID=g14047.t1.exon2;Parent=g14047.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 14633 15026 . + 1 ID=cds.g14047.t1;Parent=g14047.t1 #PROT g14047.t1 g14047 MGCSFPEASESSSQLLENIKRRRLVPNDVIPHGLGYEYAVADGVNGFTTTTGISSTADALPYRSAWSEGPADVFMGTSQTRAKDNSSRLAAAAYNIHDAFDSNPTDMLMEEDWNVADGAMGYDGEGMVWSEMPRDDAYGHHDQLRGGQGNTTRTYDRLDGRILTTDDLIFGGPITCSPRPAPVRWPPLYPFDYESSNENLRKMPPHRMF* # PASA_UPDATE: g14042.t1, single gene model update, valid-1, status:[pasa:asmbl_848,status:12], valid-1 NODE_121_length_37810_cov_41.5825 . gene 489 3438 . + . ID=g14042;Name=g14042.t1 NODE_121_length_37810_cov_41.5825 . mRNA 489 3438 . + . ID=g14042.t1;Parent=g14042;Name=g14042.t1 NODE_121_length_37810_cov_41.5825 . exon 489 1175 . + . ID=g14042.t1.exon1;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . CDS 489 1175 . + 0 ID=cds.g14042.t1;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . exon 1435 1560 . + . ID=g14042.t1.exon2;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . CDS 1435 1560 . + 0 ID=cds.g14042.t1;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . exon 1755 3438 . + . ID=g14042.t1.exon3;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . CDS 1755 3404 . + 0 ID=cds.g14042.t1;Parent=g14042.t1 NODE_121_length_37810_cov_41.5825 . three_prime_UTR 3405 3438 . + . ID=g14042.t1.utr3p1;Parent=g14042.t1 #PROT g14042.t1 g14042 MDSTATELIPLNPHTSSPPSIGIIPSETVADEAAKFEYIRPEIMRMESDSAVVNGASGGTEVENGNDCSDATPCANSDAPFVLDESDKAVAQFFGISDDASVDAPNQGLHRREDLSDGRRSISPAVCEEGTKITTVHDNGQAMDATGAPTSCKASGVDGVASNVDKHNNATAVSVEGGAVTETVTADGGGVRSRTGSVQKAPDGWHDYSNFGEPLGKTRIIALKTPLTEDFDTRQSGPFTCADFVEAQKKLGRRVGLVVDLTNTTRYYDPKHFTDANVEYRKIMCVGHEIPSAKVVREFFDVIGEYMQRTPTEDSLVAVHCTHGVNRTGFLVCLYLVHKCGMTPADALSLFSESRPPGIQRQTYSEHILRRGDQQIPDRDAISSREKDAQKNTPSSTSASHAPDRRESNSSRRDRSPAADHLRSRSPRRRRSVSPGDRFRRDGHVRHEPYGRPSRGAMRGGGGSLRARDHRGPDRPADDRYRPDYARDRAYPPRRHSPPPLSHFDGDARRRDYHDGGMRGRDSRDLPRFGGDRGRERDYGPDWRHVPARGAPPPPYGPPAPHHNAYGAPPSLLHAPPPLAYQRPQVHGAHGAHGALGAYDDGRRSPPHHPASAYGMGPPPPRDLRDPRDIRDPREYGDSYLGRGPSSDYHALDHVRHVQQSAQPPPNGRAPATPNSGYGAPPMSTSGQGHAGQYGNGQYASAPYSVQPTGIAQSYPPTTATAYVNPSFAAAVSPPATQAQSLSLSLSSSFGTAYINPQFAQHLTAQSSPPPLLPTHQQQHQQHQQPHPASYGGTYPSAYASATQQYGQPQQHQQQQYRGY* # ORIGINAL: g14051.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 27625 34477 . + . ID=g14051;Name=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 27625 34477 . + . ID=g14051.t1;Parent=g14051;Name=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 27625 28896 . + . ID=g14051.t1.exon1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 27625 28896 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 29066 29497 . + . ID=g14051.t1.exon2;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 29066 29497 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 29850 30000 . + . ID=g14051.t1.exon3;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 29850 30000 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 30309 30399 . + . ID=g14051.t1.exon4;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 30309 30399 . + 2 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 30639 30756 . + . ID=g14051.t1.exon5;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 30639 30756 . + 1 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 30997 32107 . + . ID=g14051.t1.exon6;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 30997 32107 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 32327 32988 . + . ID=g14051.t1.exon7;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 32327 32988 . + 2 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 33163 33600 . + . ID=g14051.t1.exon8;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 33163 33600 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 33968 34477 . + . ID=g14051.t1.exon9;Parent=g14051.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 33968 34477 . + 0 ID=cds.g14051.t1;Parent=g14051.t1 #PROT g14051.t1 g14051 MAQRDRYTDRREDGGRHRHTLTSSPYALVDDRARNERDSHGSRKYDSSHSRKHARDDVEGDEVDYRRRRRDADNARPDDSPSRNDDKRRPVESEHDRSARGHDVHAPLNDERGHSVRRRRRESDAEGDDKDGRRSGVRRRAEDERYDNTRPASRFDESRTVTRGTVVRVAALHGGGIGAGGGVRERDRDGGRANDGSAVGGTTVGIGDEVPQWELYVSELDRLFFKPTDHIRKGSDEYDEMWAFLRRYEEFRRNRPPLPPPSARHSQNDERQQQPALPPDSPFADLPSRYDSRYRMNFSLLADAIPGAHGVDNRTNRRGRGASRYFGGSMHRGGGDAHDNDDDGIDHDRSGGRRLGKKEIAEFLDRMRHFENFLQREKLSKLVKMRRDKANLPIAKYKDAIVRLVRENRVVVVSGDTGCGKSTQVPQYLVEGGFRAVACTQPRRIACVSLARRVGHEMMSPPGVLAAHHIRFEDTKSTHTRVTFVTEGLLLRQLASTGGALEDGSARYDVIVADEMHERSMQGDFLLAVLANKLMRERSDVRLVIMSATINVELFSRYFNGAPIVQACVPGRLYPIDVHYHPVHDASAKEDLGKGGERKPLKPERINPLPFVRIMERIDREYPSTERGDLLIFLSGTAEIAAVELAAKEWIVLPLHSALSSKAQDKCFDTPPPGVRKCVISTNIAETSVTIDGIRFVVDSGRVKEMGYDPQARMRRLCEYWVSRASAEQRKGRAGRTGPGVCYRMYSQDDFSAFAAYPVPELRRVPMDAVILQLLDMGVGNPRSFVFVEAPPEGAIDRSLETLLMHGAITARSIASATLSATLASSAAVGAAASADVDVRGEGGDAQDGHVRASAGSVGSAAAAIASPRLTSLGKLLARLPVDTVVGKMLVLGAVAGVAGDAMVLAAGLTVQSPLLKADGRSQEKREELVSAEGDALTVMNAYTGWAREPRGNRRRWCRERGLEEQRLIEMSRLVEQFREILVTHGILRPPSGDRDGNPGTLGGSDDFVAFDDPAELERERRRRRRRERRRDALDRLRTTNKRRGVLAVGDDGGNVEAGTSDEEEEEKKQEERRRKGRDRDKRRRYGPGTDGESGDVGEAHNSDDDARFELDNADDAFDGGGSGDGCRSGGDSDGDKGEGEGEGEGRGDKKGGGGGSNDRMRVLKAVMSMALYPQLALPDEHNAAKRDSEKIYHAHSKQFVAMHPSSVYYADPSLLGPGDLGSARDGHHVLCYVSLLETAKPYLVGVSRTPLAPSLFMLCSIVDTVEDCRRIVFDRWIEVVFSSAEQAQSILAAAIRVRIMWRHLVSRRLARTAMGAFRVSGDNSNIANNNNNNNSTGAIVNGEDASGEGTAILGANGDTTTGDVAVDGLAGGEAIVAPPYVAEALADAADFVAMKCIGGETNDELEVRMIRQLARSIAALVKSRVQCSAARVSALQSERLGIAEGMSVDAAYPNPIAGFLRWGSLSLANAAPASGGEGGGADKTTAPSSGVPVSEHLRTVWRCPVCGRNLIVNGVERESHRLKCAPPPAGVESGQSTGDGAVTQAQSQAARGGRPAAEPHFLREYECSVCGETLMLTNTMILRHVRMHREETE* # ORIGINAL: g14050.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 24123 27351 . - . ID=g14050;Name=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 24123 27351 . - . ID=g14050.t1;Parent=g14050;Name=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 26407 27351 . - . ID=g14050.t1.exon1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 26407 27351 . - 0 ID=cds.g14050.t1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 25487 26245 . - . ID=g14050.t1.exon2;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 25487 26245 . - 0 ID=cds.g14050.t1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 25206 25307 . - . ID=g14050.t1.exon3;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 25206 25307 . - 0 ID=cds.g14050.t1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 24763 25044 . - . ID=g14050.t1.exon4;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 24763 25044 . - 0 ID=cds.g14050.t1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 24555 24583 . - . ID=g14050.t1.exon5;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 24555 24583 . - 0 ID=cds.g14050.t1;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 24123 24324 . - . ID=g14050.t1.exon6;Parent=g14050.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 24123 24324 . - 1 ID=cds.g14050.t1;Parent=g14050.t1 #PROT g14050.t1 g14050 MHIPAHSATQNGTGGVTRAYITLRSSSSYACLTQMGDTTDPHFLFSGSALLDRFAAESLSGIAGHSPIFSLHDAANNAIGIETGVENGLGVVVHETNPFASPDVAGQLFHVRSDSSDDDELLLIDGDMAVQSHENTYKTSPPVARVFTFDAFPMSSSDKHEEPPLISESALGMDSPRALMDDSDAGNEEEISMRKESLHAVASPPSHNTQPRVDAPSLPTHAQTEAPSRRGTLFMDYEDLERSLLALTSHYARVQFRLKQIVGAKPEERDRLLAELEEYAFAGCPDPRAVDGIRLSSRVDLPESGQSGRVVKARRQQQQQQPQQQQQQQQAPSVSSALSTPTRAQSRSIAEADDGSPRTPTAADIVSSADTPARRSKMESMLRSFYGRYRDIATITGNVGGDSTPLSGDNENGLDTNGSSAATDGISRQTAKTSGAVESKDRAASVSHPSASSLQSQSGAQPSATDGGEPGAVLTSSVGNTHTANNGDADADAESDAALENALDTRLRQLSARNAGPDGVAITDNPEHPRGFTLPLQRLSRSCRSIALLFDQRGSMERAKKRLGYLCERPNFDAELIGQVRDALSPALMALYMHGTKRKGWMGTRKGITHPWDLFVQYYKLQDGDKVNATPLRKLSMAFGAPASPRHTPTDSVRSPGGSVATEQAEWLKDNRRSLLDAVQLVTRSHDPLKRDADCKFRSLVYYGLNRRQLSAWCALVCNCEDVMRATHEEWAYARRFAFGGACVHLQTLEPFEFMLAENYEIASLVEMRHGF* # PASA_UPDATE: g14045.t1, single gene model update, valid-1, status:[pasa:asmbl_847,status:3], valid-1 NODE_121_length_37810_cov_41.5825 . gene 10592 11769 . - . ID=g14045;Name=g14045.t1 NODE_121_length_37810_cov_41.5825 . mRNA 10592 11769 . - . ID=g14045.t1;Parent=g14045;Name=g14045.t1 NODE_121_length_37810_cov_41.5825 . five_prime_UTR 11701 11769 . - . ID=g14045.t1.utr5p1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . exon 11601 11769 . - . ID=g14045.t1.exon1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . CDS 11601 11700 . - 0 ID=cds.g14045.t1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . exon 11343 11401 . - . ID=g14045.t1.exon2;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . CDS 11343 11401 . - 2 ID=cds.g14045.t1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . exon 11010 11175 . - . ID=g14045.t1.exon3;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . CDS 11010 11175 . - 0 ID=cds.g14045.t1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . exon 10592 10841 . - . ID=g14045.t1.exon4;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . CDS 10711 10841 . - 2 ID=cds.g14045.t1;Parent=g14045.t1 NODE_121_length_37810_cov_41.5825 . three_prime_UTR 10592 10710 . - . ID=g14045.t1.utr3p1;Parent=g14045.t1 #PROT g14045.t1 g14045 MGDAGEEQIYLRYYTGHKGKFGHEFLEFEFTPSGKLRYANNSNYKNDTIIRKEVYVDKSVMQEVKRIIEDSEIMKEDDNMWPNADRVGRQELEVVLGDEHIAFTTAKIGSLADVQNSKDPDGLLIFHYLVQDLRCLVFSLIGLHFKIKPTP* # ORIGINAL: g14048.t1 original gene structure, not modified by PASA NODE_121_length_37810_cov_41.5825 AUGUSTUS gene 15144 18893 . - . ID=g14048;Name=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS mRNA 15144 18893 . - . ID=g14048.t1;Parent=g14048;Name=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 17810 18893 . - . ID=g14048.t1.exon1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 17810 18893 . - 0 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 17562 17686 . - . ID=g14048.t1.exon2;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 17562 17686 . - 2 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 17285 17356 . - . ID=g14048.t1.exon3;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 17285 17356 . - 0 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 16079 17067 . - . ID=g14048.t1.exon4;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 16079 17067 . - 0 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 15855 15918 . - . ID=g14048.t1.exon5;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 15855 15918 . - 1 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 15473 15574 . - . ID=g14048.t1.exon6;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 15473 15574 . - 0 ID=cds.g14048.t1;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS exon 15144 15350 . - . ID=g14048.t1.exon7;Parent=g14048.t1 NODE_121_length_37810_cov_41.5825 AUGUSTUS CDS 15144 15350 . - 0 ID=cds.g14048.t1;Parent=g14048.t1 #PROT g14048.t1 g14048 MFAVNRFVGDDGGEKGGKGGQKSSDLLKRLADKARERASATASANASQQAQPVPANFEKRDKTVSLVLSEDKKSKDVKKRVSDAGAIHPVKDAAANVIIQSPAPTPRGSSKVDNKTSATSDTIMSDSTAEIDGVGRKHKRKGGSDAADDRRAPTVTEGPATKRRKEETRKEETTVAVTEVGKVAKTTADTIVPVKIGSHSASNAQGTVAAARAEPAKDVTPIEEDGRESTGKKSSKGKKRKRDDTATDAPAAPPAQKTFDEPPVDPISEDAAQKEVDMDAQTRDYGNVDVSEKSDRQKKPGRGVASQRDGKEEKIRVVPKWVENAVEIDSAQAEKVAIDTLGLSEGTVSALRKQGITHFFSVQSAVLPVILAGTKSPIHPGDICVCAPTGSGKTLAFAVPIVEALRDRVVPRLRALILQPTRDLALQVKVVLDAVTVGTNLRVVVSTGQTPFVREQEEFNCQTSKRAGSVGEGEGKGKDKGVEAEGPQIDILVCTPGRLVDHITSTPGFTLKHLRFLVVDEADRLLHQSYQQWLPKVLRSAQGTSTPDDRHGDDAWAVGMARQSGGMSAVTPSAMCREGVPLQKLLFSATLTNNPEKIASLNLYSPRFFSIRKRAGDGVAHKTGADANVSTQAPFVRFATPATLKEYSVVCSAGEKPLVLLHLLRDLKFDRVICFTASVESTHRLFLLLKLFGGIDVAEYSSSLPQRNRTQMLEDFRRGSIKVLVCSDAMTRGMDLDNVQHVISYDAPVYVKTYIHRVGRTARAGQSGNAYTFLRPEEMFHFKEMLLKLDKQGINKFPIAKDALKKHVDLYQATLGELKKAIDYEKFGRSMTTSASGAAAVGAAPRKNADGGEDAEAGEAITSMLQRQMLSNFSRMAHMS* # PASA_UPDATE: g6934.t1, single gene model update, valid-1, status:[pasa:asmbl_6796,status:12], valid-1 NODE_3989_length_2392_cov_33.0868 . gene 104 1893 . - . ID=g6934;Name=g6934.t1 NODE_3989_length_2392_cov_33.0868 . mRNA 104 1893 . - . ID=g6934.t1;Parent=g6934;Name=g6934.t1 NODE_3989_length_2392_cov_33.0868 . five_prime_UTR 1873 1893 . - . ID=g6934.t1.utr5p1;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . exon 1764 1893 . - . ID=g6934.t1.exon1;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . CDS 1764 1872 . - 0 ID=cds.g6934.t1;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . exon 1274 1418 . - . ID=g6934.t1.exon2;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . CDS 1274 1418 . - 2 ID=cds.g6934.t1;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . exon 504 618 . - . ID=g6934.t1.exon3;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . CDS 504 618 . - 1 ID=cds.g6934.t1;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . exon 104 342 . - . ID=g6934.t1.exon4;Parent=g6934.t1 NODE_3989_length_2392_cov_33.0868 . CDS 104 342 . - 0 ID=cds.g6934.t1;Parent=g6934.t1;3_prime_partial=true #PROT g6934.t1 g6934 MNGIDASKAMSVKTLILKVVGVTCAVGASVVALGPEGTITHIGAMITMRLVRVFVHVKRPAWAVRLLRPMHKLLNPKDERTMSTIGSSIGLASAFNAPIGGTMFMMEQSNAVVSATLIFKTFMACIVAYYIAYQLELAVLGNNFVSRFAVTQTGCFDGLGHGAFLYFAILGGVCGLLGICFNFLSIRILAWRNRNINHTLSR # ORIGINAL: g11721.t1 original gene structure, not modified by PASA NODE_162_length_34065_cov_40.9571 AUGUSTUS gene 3072 7828 . - . ID=g11721;Name=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS mRNA 3072 7828 . - . ID=g11721.t1;Parent=g11721;Name=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 7518 7828 . - . ID=g11721.t1.exon1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 7518 7828 . - 0 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 7013 7306 . - . ID=g11721.t1.exon2;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 7013 7306 . - 1 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 6597 6780 . - . ID=g11721.t1.exon3;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 6597 6780 . - 1 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 6143 6350 . - . ID=g11721.t1.exon4;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 6143 6350 . - 0 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 5756 5854 . - . ID=g11721.t1.exon5;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 5756 5854 . - 2 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 5301 5424 . - . ID=g11721.t1.exon6;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 5301 5424 . - 2 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 4958 5101 . - . ID=g11721.t1.exon7;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 4958 5101 . - 1 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 4328 4644 . - . ID=g11721.t1.exon8;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 4328 4644 . - 1 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 3972 4158 . - . ID=g11721.t1.exon9;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 3972 4158 . - 2 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 3636 3792 . - . ID=g11721.t1.exon10;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 3636 3792 . - 1 ID=cds.g11721.t1;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 3072 3305 . - . ID=g11721.t1.exon11;Parent=g11721.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 3072 3305 . - 0 ID=cds.g11721.t1;Parent=g11721.t1 #PROT g11721.t1 g11721 MIRLRSITGEEVPIASSSADSRFDFTSSRPSGHSTAADTMDSDGATDGVRSRNASMNESGFGVLRSHSFRSGGTTVNIASVAEDPFMRNPYEISGTLPPNVHPWEFAGWGEFQTISDLGAASPSMYGTSRSSTSDLATKLSDTDESPSTPLMAAESRNPVAPVNAKPHKLLGQFAATAISGNDITSSCLYVAGIAALNGGKWAPISLALVCAVLYLFRSIYSEVVTALPVNGGTYTLLLNTTTKGVAALAACLTLLSYVSTAVMSATEAMWYLHHLWSGLNIDAATIGVLAFFAILTIIGVTESAPVAIFIFVTHLVTLAILIVSCFVQAVQNDWQILRDNLKLTRVDGYWENNVGASLFYGFSTGMLGISGFETSANFVEEQKPGVFVKTLRNMWLAVTFLNPLISFLAMCVLPLSEVMKADKVLLEEMASHDWLKKLVSVDATLVLSGAVLTSYVGVSGLIRRLALDRCLPSVLLTTNRLTGTNHVIVLIFFAICTSLYFITEGDTLVLSGIYTLSFLSVMALFALGNIIMKYKRSSVARAVVANPVAVLVAFLAVVAAIVGTIIKSPRDVEYFVIYYTATVVIVVVMFQRKRLLKILLTWLRPMEGRPPPVTRWAKFIEWLAARAVVSMQGLCAQQIVFLLKEPDVVLMNKVALYIRDNEDSSWIKFVHIYDRDDNIPSSFIEYTHFLDMVYPKMRFDFVAAKGAFDHETLAQLSQRLNIPLHFFFIAAPGKDFKLDLAKLGGVRLITH* # ORIGINAL: g11723.t1 original gene structure, not modified by PASA NODE_162_length_34065_cov_40.9571 AUGUSTUS gene 12159 22525 . - . ID=g11723;Name=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS mRNA 12159 22525 . - . ID=g11723.t1;Parent=g11723;Name=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 15476 22525 . - . ID=g11723.t1.exon1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 15476 22525 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 15070 15165 . - . ID=g11723.t1.exon2;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 15070 15165 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 14813 14883 . - . ID=g11723.t1.exon3;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 14813 14883 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 14320 14488 . - . ID=g11723.t1.exon4;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 14320 14488 . - 1 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 14043 14102 . - . ID=g11723.t1.exon5;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 14043 14102 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 13732 13792 . - . ID=g11723.t1.exon6;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 13732 13792 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 13410 13478 . - . ID=g11723.t1.exon7;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 13410 13478 . - 2 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 13230 13279 . - . ID=g11723.t1.exon8;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 13230 13279 . - 2 ID=cds.g11723.t1;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 12159 12905 . - . ID=g11723.t1.exon9;Parent=g11723.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 12159 12905 . - 0 ID=cds.g11723.t1;Parent=g11723.t1 #PROT g11723.t1 g11723 MAARSVITQLTICRLACALIASALFLSAGASDAESEGRAFDEDTAVLQQFADNDINRRRQDPASIEVHVIDNSRDSALFEKGTRAVADPEDFGVIIDAIELAFANGETSILILLAGTYNVNSEKMRTISVRHGMNVSLVAEDSQSPVVQCGGAANSTSDVTVLQIPLFEVESGGQLTIVNIQFTECSAGTLARVSDNGALVVTSSSFHSASCFFLFDSHAPPSFHVSGVASFTQCGFSCGNLGNPEEGVRLPANALTHPSDSDWLGSVVSPIFVADMAAKIELASCFTVQRALALLSNNARLESSDTVFLVSFGGPCILAVDDASAAFNGGIFQVPNVAHLRDSAALEFRNAVQLHAHGSDMAWTEGQVACAALRLHGNTSLFSEGTEVVLGRCNGLVLDDASSAVIIDNALSVNAPCEFYYFLNGSSSMHISGGSIQSPMSDFVTVAMGVHGGTSVALIERFSVSYNVTNSRQSGPLTPQFLMSDSATARFDNVSLVPDVLTSGVLFSGKHTFEASGNALLELNEISCFMCPGIVHALENATVSMTNSEFTGNNFLPPHIFAPEDLWNYLRGPDVAMGVLFAIEGSATFNGTSCRLIAMQRGLMGGVGYLSDTSRATITNFTVDTAGACDSKGGGFYVSDGAFLEIRDSTFSRVFSLCDWQSTTVGQGGFAYLEGTSHLLVRNITLREIRARKGGLLYATGTATADMSGVHVDDISAGEHGGGMYLTEHANARLSHSSFDNVFAGTEGGMFFLTGGASLAAHSFVAMNMPNMYRGGLLSASESAVGRLSEVIVGNVACQQVLLPGISDGPKVGDWLKIFLQFRTPPAYPVTIADGCAIYVSNSAAITLDSVVVQGVVSAFIGGGVLSIRDEGRISARNLSFTDVSTHGNGGAVKVSDYATFTVEDLNVTNSMAATAGACVVALGRAIVSVNGLYVINSYSPLGGGCIYADNAASVCIIGGASASVGTLHGGGFVMATGSSTVNITRHPVRQATAATGGFAFVTLTARLFLDDVDVQAANASGNGGALSIDKRAFCQITRSRFEQCVASHLGGALYVQSSATLVVLADTECNNCNAEFGAVLAATDSSSSFIVGLHVLNATASENGGALYATDNAVLSVDSSFSSGSTTEGSRGGFLAADGIAVVRMTQLLVSMASAPFGVGGAISVRGQSQVNITSSIFTDVSGSIAGGFLHQSGLSTAHVSGVEVHGAWTDGIGAGIVVRGAARLFIESTTLVNAQRPRGLGVGWFSAAPDSVGSYVNVKCINCTEELFVGNLMYDYEYYVNPNDTYFGPDAFLPDSEEQRELEGVFSSDYVLSFILQGYRYYAEQHQTVVNAVIDTERAFGTEKVDYTNVAMRIHSVAAITYATVSDSIEISVFPSGRLTLQYAALETSPVTVDGTLYLLDVAVVESPIVVRGSGWLHCDGCTFASNQSRRRRDANGDGLVEYGPLIVMTDETFAAFVNLVIGAYAATTGNGGFASVSNAAVISVNKGDVGSIGSAGNGGFVSAEVLSVGEQSTPRISIDGVIVANCHAGGDGGMLWIRDHAVASVRNTVISLSRAQGSGGLIYAADSAVVTVDKTSIRMSSSGGNGGVFSLIGAVSATLASVNVSGSSSGANGGLAALSPIAGASGVPSLAIDKLSVDDLSSGANGGAFFSSGSHIHVGHSVFTGLRAAALGGLVHVAGDTASDIVVDECTFDDVTTAGHGGLVSLTDTSSALMRRCHGNHISSDLDGGAFYVEKGSMTVKNSTFANCLSNGGGGSIAINGGVIRVETTSFTNTTSDLGGGLALLQSLGEAIFTDVSVVGSNTNSVGGGVFYMAGRSRLNVDGISIRRSSALGLGGALSADGRASAVINRMDLRDSVTTFGHGGFAAVVGNARLVISNSTALNTSCDEQGGFVYMNGAATVDLSNVTISGVSSLTDGGAIAVLSKGKVKLSNVSISRASAALRGGLAYVGSFADLTADGVTVSGSSAADGGVLHVDSTASASITGATVSNASAAGNGGCMYSKSSRLVVTDSSFTGCSAGVVSATYGQGGFLYLDAEKASDVVIHSVSVSNLHAASAPVIFSSTKLGISADSAFSRVGSRDALFGNASAAIATPAATLLVSLSSAVPAASRRRGLSDSSIGAVPLFPTQRSGESLPSFSVLIVDAYGLPAFASPSVPLAIRLVVRNDSASGSCTLAGDLTRTFSRISRVDYSNVRISSATVPADCTVVIIPDNFLYSEEDALFRSQTPQTVRLAACASGTSLENDASTGQFSCVSSAVPAAASSSNSTVIIAVVVSLVFVSLAVFGAAYLLVRRNRRRWNMKQIEDFAKHMQNAQPDLARLELPRDAIDLKEILGEGAFGVVHKAQVVIGSRMRPCAVKTLKSNVSVEQRIEFISEAEIMMNLHHENVVNMVGVVTDGDPMFIVLEFAAHGSLKSFLSEMERHRNSNRRINYNEIFAQIAGDVADGMAYLAQQSIAHKDLAARNVMISNNPFGDFQAKVADFGLSRDLGGREYYKKSKRGMVPVKWSAIESLVYGVWSTKSDVWSYGVVLWETWTFGQNPYPGISNSETLAHVQNGGRLEMPSDCPQHVYDVMVSCWCREPDERPTFAMLAEMFAKIRNDWKGNNNDDMGFAEYANEGAAMVVDRAARAVPAFDWRGRPSGSYVNFAVGTLASQRDDDNAADVEGGDRAPAAMGSPKYANISFPAQSTRETPRVAILNHAVKQSPTPTSTPTARRARADTYRYAMDVSGAEKEAARIPASLTRPDKINPYSNPEEYDQTTPAACTEASDDQILTFDVEDEVRESGV* # ORIGINAL: g11720.t1 original gene structure, not modified by PASA NODE_162_length_34065_cov_40.9571 AUGUSTUS gene 354 1830 . + . ID=g11720;Name=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS mRNA 354 1830 . + . ID=g11720.t1;Parent=g11720;Name=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 354 560 . + . ID=g11720.t1.exon1;Parent=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 354 560 . + 2 ID=cds.g11720.t1;Parent=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 764 1087 . + . ID=g11720.t1.exon2;Parent=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 764 1087 . + 2 ID=cds.g11720.t1;Parent=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 1358 1830 . + . ID=g11720.t1.exon3;Parent=g11720.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 1358 1830 . + 2 ID=cds.g11720.t1;Parent=g11720.t1 #PROT g11720.t1 g11720 VFTEGTDIPNIDCVLLARPTRSKGLLIQMAGRGLRLSPAKTDCAIIDIADNFPTGQDRATLDGFFDLSVKPLEATKQDHEGAADDIAADEKGTESRAIQTDADCTKASASVKPLALQTLTYDFCENPPEQDEDPGGKNSAYPARYFDYCCVSTEPIVCLRGPYGPTRRVYGIRSSKGSTDGRIAFSFSGGVLTEIAREPSMRALERAIEDCIRQAHGASALFSAAALRGPASEKQRACLSSLMRSPSDPPIPDGLDKRAASKLISEKLCKQAWWLLPSRVRAAVTSRMVPSVDVQSAPVQATAPASTVAVPTRAARRLDTHTHAHVADTHTPM* # PASA_UPDATE: g11724.t1, single gene model update, valid-1, status:[pasa:asmbl_2197,status:12], valid-1 # PASA_UPDATE: g11724.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2198,status:12], valid-1 NODE_162_length_34065_cov_40.9571 . gene 23327 27426 . - . ID=g11724;Name=g11724.t1 NODE_162_length_34065_cov_40.9571 . mRNA 23327 27426 . - . ID=g11724.t1;Parent=g11724;Name=g11724.t1 NODE_162_length_34065_cov_40.9571 . five_prime_UTR 27354 27426 . - . ID=g11724.t1.utr5p1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 27044 27426 . - . ID=g11724.t1.exon1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 27044 27353 . - 0 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 26601 26757 . - . ID=g11724.t1.exon2;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 26601 26757 . - 2 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 26318 26384 . - . ID=g11724.t1.exon3;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 26318 26384 . - 1 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 25888 26141 . - . ID=g11724.t1.exon4;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 25888 26141 . - 0 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 25509 25701 . - . ID=g11724.t1.exon5;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 25509 25701 . - 1 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 25272 25362 . - . ID=g11724.t1.exon6;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 25272 25362 . - 0 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 25031 25096 . - . ID=g11724.t1.exon7;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 25031 25096 . - 2 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 24687 24846 . - . ID=g11724.t1.exon8;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 24687 24846 . - 2 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 24318 24433 . - . ID=g11724.t1.exon9;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 24318 24433 . - 1 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 23988 24098 . - . ID=g11724.t1.exon10;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 23988 24098 . - 2 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . exon 23327 23854 . - . ID=g11724.t1.exon11;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . CDS 23460 23854 . - 2 ID=cds.g11724.t1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . three_prime_UTR 23327 23459 . - . ID=g11724.t1.utr3p1;Parent=g11724.t1 NODE_162_length_34065_cov_40.9571 . mRNA 23327 27426 . - . ID=g11724.t1.1.5b6be70a;Parent=g11724;Name=g11724.t1 NODE_162_length_34065_cov_40.9571 . five_prime_UTR 27354 27426 . - . ID=g11724.t1.1.5b6be70a.utr5p1;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 27044 27426 . - . ID=g11724.t1.1.5b6be70a.exon1;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 27044 27353 . - 0 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 26601 26757 . - . ID=g11724.t1.1.5b6be70a.exon2;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 26601 26757 . - 2 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 26318 26384 . - . ID=g11724.t1.1.5b6be70a.exon3;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 26318 26384 . - 1 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 25888 26141 . - . ID=g11724.t1.1.5b6be70a.exon4;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 25888 26141 . - 0 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 25509 25701 . - . ID=g11724.t1.1.5b6be70a.exon5;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 25509 25701 . - 1 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 25272 25362 . - . ID=g11724.t1.1.5b6be70a.exon6;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 25272 25362 . - 0 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 25031 25096 . - . ID=g11724.t1.1.5b6be70a.exon7;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 25031 25096 . - 2 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 24687 24846 . - . ID=g11724.t1.1.5b6be70a.exon8;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 24687 24846 . - 2 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 24318 24433 . - . ID=g11724.t1.1.5b6be70a.exon9;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 24318 24433 . - 1 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . exon 23327 24098 . - . ID=g11724.t1.1.5b6be70a.exon10;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . CDS 23740 24098 . - 2 ID=cds.g11724.t1.1.5b6be70a;Parent=g11724.t1.1.5b6be70a NODE_162_length_34065_cov_40.9571 . three_prime_UTR 23327 23739 . - . ID=g11724.t1.1.5b6be70a.utr3p1;Parent=g11724.t1.1.5b6be70a #PROT g11724.t1 g11724 MTVPITKWGFVVATVLAVALAAGLALAHLGHDGRQCGTHTNYFRKLAEAAQLRQDVQTPPQPVQNELPATRCFYNAGTLCDNPELRNAYLYALERDILEDAKIALRVYIVADDNGENPIIPDSDTVAQVDFLNNFYKAAGLTFEHELQYIKMSRLRYGALLPTMNCKPEMVGNGVFDQECMGAFSGFDGGDGTGINALCEDQETCDKNNCNYGFLSANANNPAGCTCICRMGAVRTCRRTASDGVCDPVCNLKKYDWDWGDCCVTANRGTCLDPTSPHRNWISAVELKTIVNDAGIDHMSQFVSPFYLEAGAPSLFTGHATFPWDEVVNTPLGGVIFSSSVWGPGKTTAVHEYGHALGLLHPHVGTSDIFDWYLTHGLQDSFCEYTRSFGPSDGPRVSSFPSACYEGQPDTFSGESSDWTGDFCSDTRPTPTVYKCNDPALADCAAGYVTEPCTDCLTGKQWVNTPYANVMGYAADCETRGIDRFFTPQQHGRMRCYADLVYQNWTKQVKPAPVVFTPKATVGAGQSILLTWFRSIRPGFGNTLRYEIQRTPPFSSGNPIVGTTTFTDVSVVPGVLYSYQVVAVSASHHSRASPSSNPVLLPLSDADDLFEWRTVLAQYREELARWETETAGCNVLPTQ* #PROT g11724.t1.1.5b6be70a g11724 MTVPITKWGFVVATVLAVALAAGLALAHLGHDGRQCGTHTNYFRKLAEAAQLRQDVQTPPQPVQNELPATRCFYNAGTLCDNPELRNAYLYALERDILEDAKIALRVYIVADDNGENPIIPDSDTVAQVDFLNNFYKAAGLTFEHELQYIKMSRLRYGALLPTMNCKPEMVGNGVFDQECMGAFSGFDGGDGTGINALCEDQETCDKNNCNYGFLSANANNPAGCTCICRMGAVRTCRRTASDGVCDPVCNLKKYDWDWGDCCVTANRGTCLDPTSPHRNWISAVELKTIVNDAGIDHMSQFVSPFYLEAGAPSLFTGHATFPWDEVVNTPLGGVIFSSSVWGPGKTTAVHEYGHALGLLHPHVGTSDIFDWYLTHGLQDSFCEYTRSFGPSDGPRVSSFPSACYEGQPDTFSGESSDWTGDFCSDTRPTPTVYKCNDPALADCAAGYVTEPCTDCLTGKQWVNTPYANVMGYAADCETRGIDRFFTPQQHGRMRCYADLVYQNWTKQGASFHVVEPFYFRVLLRTCRKSIGYALANAYTVHSLTEGLPYIHSETSASCIHAQGDRWRRPIHPSHVVPINSTGFWKHPAL* # PASA_UPDATE: g11722.t1, single gene model update, valid-1, status:[pasa:asmbl_2199,status:3], valid-1 NODE_162_length_34065_cov_40.9571 . gene 8381 11766 . + . ID=g11722;Name=g11722.t1 NODE_162_length_34065_cov_40.9571 . mRNA 8381 11766 . + . ID=g11722.t1;Parent=g11722;Name=g11722.t1 NODE_162_length_34065_cov_40.9571 . five_prime_UTR 8381 8556 . + . ID=g11722.t1.utr5p1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . exon 8381 9817 . + . ID=g11722.t1.exon1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . CDS 8557 9817 . + 0 ID=cds.g11722.t1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . exon 10064 10289 . + . ID=g11722.t1.exon2;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . CDS 10064 10289 . + 2 ID=cds.g11722.t1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . exon 10522 10714 . + . ID=g11722.t1.exon3;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . CDS 10522 10714 . + 1 ID=cds.g11722.t1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . exon 10859 11766 . + . ID=g11722.t1.exon4;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . CDS 10859 11164 . + 0 ID=cds.g11722.t1;Parent=g11722.t1 NODE_162_length_34065_cov_40.9571 . three_prime_UTR 11165 11766 . + . ID=g11722.t1.utr3p1;Parent=g11722.t1 #PROT g11722.t1 g11722 MAAKGAVGATADEMDGYYLEQVSIAGDSDDEFAYAEVAVEDGLLSESSEGEEDLDYMMRTLTERTADKESKDRTKGDASKDELPVAKASVSKRPETVEDYVRNYLARMGLERTLDSFQCEWYEFAQTGRLPAGHVADGPVDVYQHNQQLTETVKQLQGEVLRGHDIATRSASKCEKMRKERDFHRMHHMRVVQEKNTVAAEVKRLEKQLSSVEPTLRSLRQKYEAAMREKMLAKLDRDRLNGRLSGLEAALRQAGIPVEGLTDTDFRAASTGFAALPSKGSDRALSTHSLAGGNVALDGTRVLAVGSSTSVDAQETSAVVLHRPQPPSVPRPEKAEKAEKAGSVAAEFPADDRPSHSRNDAQQAPMRAWEYILTTTIPAHSSAVTALAVHPKRPVVATGGNDKTWKLWTIPSGELIAASEGHREWVSHLEFSPNGNQLATASGDCTVKLWEVTRGTCLATFTDHKLPVWACAFHDQGEFLASASMDQTVQIWDLQSQRSRSVLRDHADSVATVAFRPFSNVLASGSADKTIKIWDPRSSQPIATLLGHDAAVNSVVFDSKGENLFSADASGTIKVWDARTFLEHATTDFGPHPANRLAIDPSGQVVAVAVNDGTIALWETPDKYYALQAHEGPTQAVAYARNAAGDYLISGGSDGTVRLWS* # ORIGINAL: g11725.t1 original gene structure, not modified by PASA NODE_162_length_34065_cov_40.9571 AUGUSTUS gene 31900 33979 . - . ID=g11725;Name=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS mRNA 31900 33979 . - . ID=g11725.t1;Parent=g11725;Name=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 33977 33979 . - . ID=g11725.t1.exon1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 33977 33979 . - 0 ID=cds.g11725.t1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 33764 33856 . - . ID=g11725.t1.exon2;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 33764 33856 . - 0 ID=cds.g11725.t1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 33347 33485 . - . ID=g11725.t1.exon3;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 33347 33485 . - 0 ID=cds.g11725.t1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 32954 33112 . - . ID=g11725.t1.exon4;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 32954 33112 . - 2 ID=cds.g11725.t1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 32152 32201 . - . ID=g11725.t1.exon5;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 32152 32201 . - 2 ID=cds.g11725.t1;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS exon 31900 32007 . - . ID=g11725.t1.exon6;Parent=g11725.t1 NODE_162_length_34065_cov_40.9571 AUGUSTUS CDS 31900 32007 . - 0 ID=cds.g11725.t1;Parent=g11725.t1 #PROT g11725.t1 g11725 MVWDRRLLNSERPLPVGYLEGHQMGITYIDSKGDGRYLLSNGKDQVMRLWDIRSMTSCAARPPRMASTFDYRHEDPRMAASLASRSNVRDASVAQFRGHRVLYTLIRCRFSPVQSTGQMYAYTGSACGSVFVRDVSWHPFEPSLVSTSWDGHVLRWDWVREDDRPSELPSAMRGRRGLSDDIY* # ORIGINAL: g5096.t1 original gene structure, not modified by PASA NODE_9600_length_327_cov_554.972 AUGUSTUS gene 1 327 . - . ID=g5096;Name=g5096.t1 NODE_9600_length_327_cov_554.972 AUGUSTUS mRNA 1 327 . - . ID=g5096.t1;Parent=g5096;Name=g5096.t1 NODE_9600_length_327_cov_554.972 AUGUSTUS exon 1 327 . - . ID=g5096.t1.exon1;Parent=g5096.t1 NODE_9600_length_327_cov_554.972 AUGUSTUS CDS 1 327 . - 1 ID=cds.g5096.t1;Parent=g5096.t1 #PROT g5096.t1 g5096 WTSSGNAGQYTPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSLSQRVSEEDVDGKGSVVALLIVRT # ORIGINAL: g2743.t1 original gene structure, not modified by PASA NODE_4739_length_1284_cov_140.089_potentialcontaminant AUGUSTUS gene 339 711 . + . ID=g2743;Name=g2743.t1 NODE_4739_length_1284_cov_140.089_potentialcontaminant AUGUSTUS mRNA 339 711 . + . ID=g2743.t1;Parent=g2743;Name=g2743.t1 NODE_4739_length_1284_cov_140.089_potentialcontaminant AUGUSTUS exon 339 711 . + . ID=g2743.t1.exon1;Parent=g2743.t1 NODE_4739_length_1284_cov_140.089_potentialcontaminant AUGUSTUS CDS 339 711 . + 1 ID=cds.g2743.t1;Parent=g2743.t1 #PROT g2743.t1 g2743 STGLFPSFLSAPAALQVRPRALFKNNDGQQQQTPRNLLRSGLSFPTGEAPRKSGGSECVNGTLEGAGGSSTRTAKPLNCTCDYPDYHFNDSSSHNCGNTDDDPPLNSKIYGEHSAPTRGPGCM* # PASA_UPDATE: g4261.t1, single gene model update, valid-1, status:[pasa:asmbl_3748,status:3], valid-1 NODE_2200_length_7298_cov_47.8995 . gene 4489 7181 . + . ID=g4261;Name=g4261.t1 NODE_2200_length_7298_cov_47.8995 . mRNA 4489 7181 . + . ID=g4261.t1;Parent=g4261;Name=g4261.t1 NODE_2200_length_7298_cov_47.8995 . five_prime_UTR 4489 4656 . + . ID=g4261.t1.utr5p1;Parent=g4261.t1 NODE_2200_length_7298_cov_47.8995 . exon 4489 5610 . + . ID=g4261.t1.exon1;Parent=g4261.t1 NODE_2200_length_7298_cov_47.8995 . CDS 4657 5610 . + 0 ID=cds.g4261.t1;Parent=g4261.t1 NODE_2200_length_7298_cov_47.8995 . exon 5988 7181 . + . ID=g4261.t1.exon2;Parent=g4261.t1 NODE_2200_length_7298_cov_47.8995 . CDS 5988 7076 . + 0 ID=cds.g4261.t1;Parent=g4261.t1 NODE_2200_length_7298_cov_47.8995 . three_prime_UTR 7077 7181 . + . ID=g4261.t1.utr3p1;Parent=g4261.t1 #PROT g4261.t1 g4261 MANVIACAVEGVVSGQSDRLSIVRPSYAEAAAASVDRICALLAGREPLGVGITLRHVRLDECPFPPDDAARIFAALADGPHASTIVSLELNDVGIDTYFDPSTGTEFESADAHTHFLRLLSSLPALEHFSFALCGITPEHTVAALDILRGRASLSRIDLTCTNLLAVEDGRSAAEALAEILTVDGCAVTHLDLNMSHVGVDGARALAVGLRATRTLRWLSLASCSLGNDGCAAIAEALADNATLEWLDLTYNQLTAPAYCAMSRALATNASLHTLVMPSLVHAAGPFGSGASKRDPFDGSAEEFGAVFGTNNTLKVVKISNTMFRDEFGAALALSLGTNSTLEEIEVSGTCMSRESHSAIARALADNPYCHVRRLIIETAGAPDVLSSLLGVASLRDLSVPSLGELGDAFAQSGIAACMQHNTTLETLCINSTLFSDAAFEALLAGVQSGLRGLRTLSITSCSLDATRIAALLGALGGHLLLASLDLRMNVCGGVGVAALSTLIKGCPSLRTLKLVATGLGGPHALDGLVEALSDHACPLEELDLSCNDAIDANAVARIVASTRVLKTLNLAHCTIGSGGAQVAEAMRGNTSLCSVSFEYAEMTASCVAAFVALLAANTPLVSLDLSGNFEMGYKGRASLLEARAVANTNLQHLLLYTCDSDDEFHDKMGIDNDAAVSDG* # ORIGINAL: g4260.t1 original gene structure, not modified by PASA NODE_2200_length_7298_cov_47.8995 AUGUSTUS gene 890 3972 . - . ID=g4260;Name=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS mRNA 890 3972 . - . ID=g4260.t1;Parent=g4260;Name=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 3849 3972 . - . ID=g4260.t1.exon1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 3849 3972 . - 0 ID=cds.g4260.t1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 3030 3142 . - . ID=g4260.t1.exon2;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 3030 3142 . - 2 ID=cds.g4260.t1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 2512 2745 . - . ID=g4260.t1.exon3;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 2512 2745 . - 0 ID=cds.g4260.t1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 1834 2033 . - . ID=g4260.t1.exon4;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 1834 2033 . - 0 ID=cds.g4260.t1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 1336 1478 . - . ID=g4260.t1.exon5;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 1336 1478 . - 1 ID=cds.g4260.t1;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS exon 890 1125 . - . ID=g4260.t1.exon6;Parent=g4260.t1 NODE_2200_length_7298_cov_47.8995 AUGUSTUS CDS 890 1125 . - 2 ID=cds.g4260.t1;Parent=g4260.t1 #PROT g4260.t1 g4260 MGLGNRQFQLPRELAHSVCRVGVYKASQSWHKTAFGGFLAGVFIAFGGLLSISLAGGVSVDLRTTNPFIPKLLIGATFPLALMLIIIVGGDLFTGNAMYVFVALLQKKISLKDLARNWTIVYLSNFGGCTLAAYLFGYLTDMFAKEPHLSFVTGLAVYLMYLTAYVDVGFAACCVATAANDISGKIMGIWFPIFAFCAMGYEHSIANMLYGTLGLYYGAHTSFGEFLTHNLIPATIGNIIGGSFAVGMALVYVHTWLEAGKASSEAAADYDNDSSETSSLENVHADGSAHPAHMGSLQSDKKDGAMADTQSEAAMRGQLVFADSEDAMERHLAARKATRVGGTTYVSVT* # ORIGINAL: g10345.t1 original gene structure, not modified by PASA NODE_409_length_24383_cov_60.4102 AUGUSTUS gene 8971 10872 . - . ID=g10345;Name=g10345.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS mRNA 8971 10872 . - . ID=g10345.t1;Parent=g10345;Name=g10345.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 8971 10872 . - . ID=g10345.t1.exon1;Parent=g10345.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 8971 10872 . - 0 ID=cds.g10345.t1;Parent=g10345.t1 #PROT g10345.t1 g10345 MNTPLAQASLSGRTPNTPSAAGTKLTLATLSYKYVDTGSVPKKLICQFGCLEPLVDPRRFPCKAKHTGCQNCVAKYVALFKVPDVSTSGTDSSGNARGIQCAVCRETAIVPDDVFALPTFEVDLLEMLDDIAVFCPTQGCDWKGPRGNVETHIRIGCEHQPCTWESAGCIWTGLLAVRDAHTQHCDYASVLCPNSAAGCDWMGMRKDVTAHIDGAGANPNAAAAEDGTNGAHGKTRVQGVSVPVECVVARNARNAEANKKAAEAAQLAREREDMRRKQRLDALNGKIARMNPSATDEVCLDAGGRVFVTSRQTLCASPDSVLAYMFASQGGDDRSTLTLNRDETSGCVRLDCNPDVFAVILDYLRLGEVGDCAAVGVAMVRAQAVAFEMADLVARIDESAGYPRGAPKLRVCTQKQLNAMVTALAGCLQLPETNLRGLKLANTRLDGSTFEGSILAGACLVGASLCDVNFARADLRGADLTQAIVRGADFSYALLEGCRLPHDLTECIFRGARMRAIDLSACKLVSSTCTVKKGHYDQPKHYSRGFGGASYQGKLGTSAIMHRADLQKAKLPRDIAGVDFTGADLTEVDFRSIVMSNPNTQVAADLTDTCLRRCKFDGTHSLVYVPMEGAVRD* # PASA_UPDATE: g10347.t1, single gene model update, valid-1, status:[pasa:asmbl_6950,status:12],[pasa:asmbl_6953,status:12], valid-1 NODE_409_length_24383_cov_60.4102 . gene 16105 18709 . - . ID=g10347;Name=g10347.t1 NODE_409_length_24383_cov_60.4102 . mRNA 16105 18709 . - . ID=g10347.t1;Parent=g10347;Name=g10347.t1 NODE_409_length_24383_cov_60.4102 . five_prime_UTR 18540 18709 . - . ID=g10347.t1.utr5p1;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . exon 18417 18709 . - . ID=g10347.t1.exon1;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . CDS 18417 18539 . - 0 ID=cds.g10347.t1;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . exon 17467 18279 . - . ID=g10347.t1.exon2;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . CDS 17467 18279 . - 0 ID=cds.g10347.t1;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . exon 16105 17274 . - . ID=g10347.t1.exon3;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . CDS 16255 17274 . - 0 ID=cds.g10347.t1;Parent=g10347.t1 NODE_409_length_24383_cov_60.4102 . three_prime_UTR 16105 16254 . - . ID=g10347.t1.utr3p1;Parent=g10347.t1 #PROT g10347.t1 g10347 MGVRDILVFTALCVGAYMCAMHASHVVSAAETLFPALGPMRVAKRHSLGLDSFSSLKRFVVGDNVRESGRIIRIVGELMLEDAVEYSAAVRDSAWSLVDAALRWVGSFDDPIDGVDSAKARRASASDGKAKRPKRSAKDTTDSGSNAALGTDPLAPSQTPTPAAPSTVSHVVPVHTGSPGFPAVTLPFLLTWMAPFFSGGGYCSEATSFALALWDRLPLRIAQHGDSFSGDYVTGLPRSVRDLLVGMVRQRPLYPSQPLVSVCHSEPGAWRPPMYQTTLCPVDGSAYSIGRTMFETDRITEGWVKRCNAMDEVWVPTDFHIEAFANSGVIRSKIFKVAEAVDSVFFDPARHSPLALPIGTLAVGARREHKLVSVRREIALGGPNGSESGVRPSLRPFGFLSVFKWEERKGWNILIEAFLSEFARRRPPASSNHEGDAAVEGESASGSSGSASSDEARTGDHHDDSADSHDAPVELYLLTNAFHTDDDFPHRVREMAARLGLREDDLPPIYVIDQHIPTEALPRLYRAAGCFVLPSRGEGWGRPHVEAMAMGLPVIATNWSGPTEYLNEENGYPLPISHLTEIKTGPYRGHLWAEPSLDALRSLMRRVYEQPEERARKGRKARADMVEKYNPAVVADVVVQRLLDIARKMQG* # PASA_UPDATE: g10346.t1, single gene model update, valid-1, status:[pasa:asmbl_6949,status:3], valid-1 NODE_409_length_24383_cov_60.4102 . gene 13330 15847 . + . ID=g10346;Name=g10346.t1 NODE_409_length_24383_cov_60.4102 . mRNA 13330 15847 . + . ID=g10346.t1;Parent=g10346;Name=g10346.t1 NODE_409_length_24383_cov_60.4102 . five_prime_UTR 13330 13535 . + . ID=g10346.t1.utr5p1;Parent=g10346.t1 NODE_409_length_24383_cov_60.4102 . exon 13330 15847 . + . ID=g10346.t1.exon1;Parent=g10346.t1 NODE_409_length_24383_cov_60.4102 . CDS 13536 15515 . + 0 ID=cds.g10346.t1;Parent=g10346.t1 NODE_409_length_24383_cov_60.4102 . three_prime_UTR 15516 15847 . + . ID=g10346.t1.utr3p1;Parent=g10346.t1 #PROT g10346.t1 g10346 MPSYAVMHPASAVAVHMPQSQASAGALAGSAPAAISSPSAAQSQLKVLQQWEKRLLAVLNANSPNGPLQSPQQQQQQQQQQQGGANGQDAKPQSPVEHSETTPIEQAQPTMADGVATPPPQPTSATAQSQSLSLSQSQSQSQKSGSEWIVCPLGVRCSNDASCQSSAIHHRYFRLDKRDIRRIHWSESATEESNFRGLKRRLEARGFKRNKDKEEPSRRHISVWFDAEGILSGGSAVAADSPDLYVSPPRTLKSAGRGLDGRIEKAKNKGHVGRPQSAALHGYPYDAIYSGANNYVHPGMIGPDGPRMMHAARGPSAGGVYAPQFYGQGSPYNYASNGYAAAAPYTMAYRPHPHAAAYGARDSYGSPIQNGGVFGYGSPAAGAGHPYYAQQAAMAAGPRHVMSPAHAQAYYQQMQQMQQPQTVVVQQQQQQLMQQQQQQQLQQQQQQMHATVQALHQPMDVDDMKLQQQHPYSPPVLVKTEVDAVAVSMGAPSSQDIPILRIAKDGAEVTVSADDIDAHISTLRGLVAGIKQRFTESGPAGLLPSDGQLIDSVANAIANRCRRRVVSGLPSHPAQMQVAPEERHKVLVAVRRTVDACVAAAVNRAAKPGGLDMIASLASVRLHAESPQNGRSPSPSEVVEVGEGLGLIESKLSSALCVE* # ORIGINAL: g10348.t1 original gene structure, not modified by PASA NODE_409_length_24383_cov_60.4102 AUGUSTUS gene 19483 20268 . - . ID=g10348;Name=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS mRNA 19483 20268 . - . ID=g10348.t1;Parent=g10348;Name=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 20226 20268 . - . ID=g10348.t1.exon1;Parent=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 20226 20268 . - 0 ID=cds.g10348.t1;Parent=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 19981 20024 . - . ID=g10348.t1.exon2;Parent=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 19981 20024 . - 2 ID=cds.g10348.t1;Parent=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 19483 19662 . - . ID=g10348.t1.exon3;Parent=g10348.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 19483 19662 . - 0 ID=cds.g10348.t1;Parent=g10348.t1 #PROT g10348.t1 g10348 MAEDAHAAALADVLNISRAHLKDFDWKVQMSLASDKMNNLREPLLLLNLRLEGTDVARKDVQIELTRDELAVLIAKLEGLRSELVNVL* # PASA_UPDATE: g10343.t1, single gene model update, valid-1, status:[pasa:asmbl_6951,status:12], valid-1 NODE_409_length_24383_cov_60.4102 . gene 226 2219 . + . ID=g10343;Name=g10343.t1 NODE_409_length_24383_cov_60.4102 . mRNA 226 2219 . + . ID=g10343.t1;Parent=g10343;Name=g10343.t1 NODE_409_length_24383_cov_60.4102 . five_prime_UTR 226 227 . + . ID=g10343.t1.utr5p1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . exon 226 405 . + . ID=g10343.t1.exon1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . CDS 228 405 . + 0 ID=cds.g10343.t1;Parent=g10343.t1;5_prime_partial=true NODE_409_length_24383_cov_60.4102 . exon 595 818 . + . ID=g10343.t1.exon2;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . CDS 595 818 . + 2 ID=cds.g10343.t1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . exon 1026 1135 . + . ID=g10343.t1.exon3;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . CDS 1026 1135 . + 0 ID=cds.g10343.t1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . exon 1482 1589 . + . ID=g10343.t1.exon4;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . CDS 1482 1589 . + 1 ID=cds.g10343.t1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . exon 1836 2219 . + . ID=g10343.t1.exon5;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . CDS 1836 2067 . + 1 ID=cds.g10343.t1;Parent=g10343.t1 NODE_409_length_24383_cov_60.4102 . three_prime_UTR 2068 2219 . + . ID=g10343.t1.utr3p1;Parent=g10343.t1 #PROT g10343.t1 g10343 PQTGKLTITTETGIMEVAPNEICVVQRGIRFSVAVDGPSRGYICEVYSGHFRLPDRGPIGANGLANPRDFLTPVAWYEERSCDFVIVNKYQNHLFEAKQDHSPYNVVAWHGNYAPFKYNLAHYMVINATAFDHADPSIFTVLTCPSNEPGTAVADFVIFPPRWAVQDHTFRPPYYHRNAMSEFMGLIFGNYEAKEEGFAPGGGSLHSIMTPHGPDRDCFDKATTAKLTPVRVADGTQSFMFESALGLMMTEWGERTCEKIQAEYHKVWEGLKSNFDPTWKPAH* # ORIGINAL: g10344.t1 original gene structure, not modified by PASA NODE_409_length_24383_cov_60.4102 AUGUSTUS gene 2749 8026 . + . ID=g10344;Name=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS mRNA 2749 8026 . + . ID=g10344.t1;Parent=g10344;Name=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 2749 2836 . + . ID=g10344.t1.exon1;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 2749 2836 . + 0 ID=cds.g10344.t1;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 3031 5828 . + . ID=g10344.t1.exon2;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 3031 5828 . + 2 ID=cds.g10344.t1;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 6558 6809 . + . ID=g10344.t1.exon3;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 6558 6809 . + 0 ID=cds.g10344.t1;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS exon 7202 8026 . + . ID=g10344.t1.exon4;Parent=g10344.t1 NODE_409_length_24383_cov_60.4102 AUGUSTUS CDS 7202 8026 . + 0 ID=cds.g10344.t1;Parent=g10344.t1 #PROT g10344.t1 g10344 MRRAAALAWLRWGSTLRVGRCDGGRSFVSAAGAGDAAAAQASQDAPQKTNGVDSRADPSERRYSPLRIQMLSRNLHEQMFPGINVQYHTLDVSAAVSHLKSMGKWKEDQQPDNINDVVLTLPPLQGSSVAEHFANIGAEIAGDYLKLSEELAAEPLPPRPSQWLMRAGWTRYAPHADPVPVAHPRDDALVFDVETCVGDGEFATLAIAASREAWYCWVSPRLLDGSVPHTAAHLLIPLGKMDRPRIVAGHFVSYDRARIREEYSLTDSRMRFVDTLSMHMTVAGLSGQQRAVKLAADRKDLDKKSDSEIITSDVEPASAAAGAAVGEEEGIDVDDSGFVEALLEDDPKSQPLKSKPPEINSLERLRMEYCNLPLKKDRRNMFVKGTLDDIRKDFESLADYCAEDVAATHEVYRALFPLFRQQCPHPVSFAGMLEMGSAMLTVDESWPAYVRNAEAVYSAKNKEIEDILVSLANTAAERAHDPTVCDDPWLQGLDWTIKEARMTKAKTNAKGNVTLPARPHKRGSRGVGKPMWYVDLLDPKTDTLRLTTRMTIAPLLLRLMWNGYPLQHAGKEGGWCYRVPTQAAQELIKAGKSPVERAGDGWRLFRLPHKDHEGQNVGNPLGKEFMTYIADKTLTAETNSAKKALEVGAECSYWASARKRIKEQLVVWLDEIGEQVPLANHHVTRGEAGAVDRAIGGATQSVDCRKRVGVIIPRMLASGTITRRAVEPTWLTASNAKANRVGSELKSKIVAPLGQCIVGADVDSQELWIGSVLGDAYFARMHGGTAIGYMTLQGKKSDKTDVHSDSATVLNIKRDDAKIFNYGRMYGAGESYAARLLTKFNNMSKADAEAKARDLYRRTKGRRLHAVPDAVRNRLWRDLNFEIPHETTKSFAEDVNEFIRQHPEKDKLYWSGLPHRRRVWQGGTESHMFNALEDIATIDPRTPVLKCGVTSSLREPNIKQNEHITTRINWVVQSSAVDYLHLMLVSMRWLCAHYGIRARFAISIHDEVRYYSAEEDASRTALALHVTNLWTRCMFAHSLGINDLPLNVAFFSAVDVDRVLRKEVDMTCLTPSNPLKVEKGYTLDIYNAIQRTGGSLVGHAPAPITAATGNDGDAIPIRNGLGDTVATIATPASFQGIDRLDISQSGHAVIMLVAHPNANGTESNLARSAEERTIGESGVSSAKDVVAASTSCANAGVRVVDGADSDAESTPSAMKRRAKKSAVLDASVVDGAGTGAESTPSATKRRVKKSAVLDASAMDGAGIGAESTPSATKRRAKKSAVADASVVDGAATSAESTPTKRRAKKSAVLGAGSAPTFSDE* # PASA_UPDATE: g10349.t1, single gene model update, valid-1, status:[pasa:asmbl_6952,status:12], valid-1 NODE_409_length_24383_cov_60.4102 . gene 20759 24117 . + . ID=g10349;Name=g10349.t1 NODE_409_length_24383_cov_60.4102 . mRNA 20759 24117 . + . ID=g10349.t1;Parent=g10349;Name=g10349.t1 NODE_409_length_24383_cov_60.4102 . exon 20759 22846 . + . ID=g10349.t1.exon1;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . CDS 20759 22846 . + 0 ID=cds.g10349.t1;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . exon 23155 23299 . + . ID=g10349.t1.exon2;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . CDS 23155 23299 . + 0 ID=cds.g10349.t1;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . exon 23531 23630 . + . ID=g10349.t1.exon3;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . CDS 23531 23630 . + 2 ID=cds.g10349.t1;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . exon 23967 24117 . + . ID=g10349.t1.exon4;Parent=g10349.t1 NODE_409_length_24383_cov_60.4102 . CDS 23967 24117 . + 1 ID=cds.g10349.t1;Parent=g10349.t1 #PROT g10349.t1 g10349 MVSARAASAAATSKMKQSTLVDMMAASAKRSPRKPKARDAAAASTATVDEAIGETAASEKEHATVEGKADVVPDRDNDDDAFVDDAKSMRPPAKQTKGAAKSAPSPRAKSVKRKKDDATAAAVVGDAVDAGDASAAKVPRTAATAATTAAADEQTTKSTEPTKTAPKPSAKAARSPRGKNAAGAADGAIVDGEIKNTGDGDAPMKEAEVDAEKPEQTESANGNVASGTPKKARGKKAAVAAADAPDATATASPKASRSPAKRKRADAPQDTINGEKGAAGADAADGPKTKKPRTSKAAAAGAPTDAEKGKAAAKSGPKGQGEATVEEQAGEFQSEDKAATADAPAEAPKKGKGRSKKAENGNADVDVSAPAAAKKGKAGKKAAAPAENGDVATPAPKKGKGRAKKEGGDAAEGEASAPKKARPSAKAKGKQPAADADTESGADAADDAPKRRKSAGKKKAAAPVVTVQSLSDAAHAQSDSPRYPYGVALSAIHSAAPMELARRLRLTGSIYSVSGSPDGSMLAASSTSGTVTVYDAVTWDTLVELRDAAETQIDEFYVVQFTPNPRYVAAGGKRKDRNRWSHEDEDNHILPCPVKIFDLETGAVCARLEGHTEEILSIRFVHLGGRACMVTSSEDGFVIRWDMSDDFSSGAREPQKMDESITCMAFAVAPLSGCGNRFVLGACDDTLRLYDIEDCKLVESFGELYTSYCDFVAVVDIPTMPLPQGQWHVVTRGCEVLDAEDNSVASKPNTCNLHRLEIPAKSGEKWKLVHVKAYEHEDYHANSWLTRIACDGKHIAAPTADGCVVIWDVTSGSVVGILRDHNGGYNL* # PASA_UPDATE: g463.t1, single gene model update, valid-1, status:[pasa:asmbl_1426,status:3], valid-1 NODE_1387_length_11643_cov_59.4757 . gene 6719 10678 . + . ID=g463;Name=g463.t1 NODE_1387_length_11643_cov_59.4757 . mRNA 6719 10678 . + . ID=g463.t1;Parent=g463;Name=g463.t1 NODE_1387_length_11643_cov_59.4757 . five_prime_UTR 6719 6877 . + . ID=g463.t1.utr5p1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 6719 6889 . + . ID=g463.t1.exon1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 6878 6889 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 7100 7269 . + . ID=g463.t1.exon2;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 7100 7269 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 7663 7789 . + . ID=g463.t1.exon3;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 7663 7789 . + 1 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 7997 8123 . + . ID=g463.t1.exon4;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 7997 8123 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 8369 8523 . + . ID=g463.t1.exon5;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 8369 8523 . + 2 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 8774 8860 . + . ID=g463.t1.exon6;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 8774 8860 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 9196 9347 . + . ID=g463.t1.exon7;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 9196 9347 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 9680 9707 . + . ID=g463.t1.exon8;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 9680 9707 . + 1 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . exon 10085 10678 . + . ID=g463.t1.exon9;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . CDS 10085 10237 . + 0 ID=cds.g463.t1;Parent=g463.t1 NODE_1387_length_11643_cov_59.4757 . three_prime_UTR 10238 10678 . + . ID=g463.t1.utr3p1;Parent=g463.t1 #PROT g463.t1 g463 MAQLYVSALLGNASSDTDVWCPSNLQWMDHYFGQCCTSYANVAGFFIGLSSIGFWLIAQGPQIYLNFKNGNVESLAFLFLLQWLLGDITNLVGAFLTHQLPTQIYTAVYFCSIDAVMVTQYIYYQYRNRNDRYSAINDDYASEGKVRSLSIAGKRSLHAVLFVGVSAASFAGITLRSMEADTTAHVGRRLLSQSTFSNTSNLIGYILGCISAVLYLCSRVPQIIKNFRRKSTEGLALTMFFMAVLGNTTYAISVFLCPCGSLTLSYLVDKFPWLVGSMGTLCFDFTIFVQFWLYRKNKGGNVEEHAHLLADGNDGAEVQYSADKYAGYGSTQELRL* # PASA_UPDATE: g461.t1, single gene model update, valid-1, status:[pasa:asmbl_1424,status:12],[pasa:asmbl_1425,status:12], valid-1 NODE_1387_length_11643_cov_59.4757 . gene 209 4281 . + . ID=g461;Name=g461.t1 NODE_1387_length_11643_cov_59.4757 . mRNA 209 4281 . + . ID=g461.t1;Parent=g461;Name=g461.t1 NODE_1387_length_11643_cov_59.4757 . exon 209 1084 . + . ID=g461.t1.exon1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 209 1084 . + 0 ID=cds.g461.t1;Parent=g461.t1;5_prime_partial=true NODE_1387_length_11643_cov_59.4757 . exon 1332 1449 . + . ID=g461.t1.exon2;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 1332 1449 . + 0 ID=cds.g461.t1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . exon 1747 2188 . + . ID=g461.t1.exon3;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 1747 2188 . + 2 ID=cds.g461.t1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . exon 2463 2593 . + . ID=g461.t1.exon4;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 2463 2593 . + 1 ID=cds.g461.t1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . exon 3043 3203 . + . ID=g461.t1.exon5;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 3043 3203 . + 2 ID=cds.g461.t1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . exon 3612 4281 . + . ID=g461.t1.exon6;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . CDS 3612 3848 . + 0 ID=cds.g461.t1;Parent=g461.t1 NODE_1387_length_11643_cov_59.4757 . three_prime_UTR 3849 4281 . + . ID=g461.t1.utr3p1;Parent=g461.t1 #PROT g461.t1 g461 SGVSVEVIDGVASSNFRTLSKGSIVVPSVSSGAHAVVSLLFVDATASKIAAILSDGSLALFAAPTTTGERPSWLRDEGLAEITAVEFVDLPTRGGVFESLEKEFSHEHNNNVHTEHDGVGANILCLFINRIATQVSQLAFSITRLPQTIAGFATNPLSKGNADSTSAARAMTRDQFNLRRVLVVVSRRGALFGIHGDDGSVLWRALPLQLAGGGASHAAKVSLLRSAVHYPAVAAVVGAGGVFVFDPLAGTESTDVKGLSLEGGVRLVQAVTLPEVDAHNCHVIVALDSNNKVHGIPSTAEARAVVGAREGGVFLNVIDRTDCRIDGFKIDVADGGSLRASTLWTVRPCTPDASSRSPERIVAVSKSPSYIRSAAVGRVLADRAVLYKPVTPGFFGVFVGAASDATPCRHVDAPGVTFVLIDSARGEIVSRERHANAKGPLSAAVAENWVTYTSYNAKLRRTEIVAMEIYDDAAVVRNTTIKTSLLGRPEWRVQSQGYVIPAVVRTVAMTTTERGITNRQLLIALSGGQIVAVDRRFLDPRRPPTPPTPEEAESGIVMYQPELPMPPQWTINYNKMVSHARGIAAAPSGLESTCLVFAYGPDLFYTRITPSKPFDILNDDFNYPLLLLTVVGLAVGWGVTAQMHRVQQVNKLWK* # PASA_UPDATE: g462.t1, single gene model update, valid-1, status:[pasa:asmbl_1427,status:3], valid-1 NODE_1387_length_11643_cov_59.4757 . gene 4383 6429 . - . ID=g462;Name=g462.t1 NODE_1387_length_11643_cov_59.4757 . mRNA 4383 6429 . - . ID=g462.t1;Parent=g462;Name=g462.t1 NODE_1387_length_11643_cov_59.4757 . five_prime_UTR 6253 6429 . - . ID=g462.t1.utr5p1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . exon 6105 6429 . - . ID=g462.t1.exon1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . CDS 6105 6252 . - 0 ID=cds.g462.t1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . exon 5704 5780 . - . ID=g462.t1.exon2;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . CDS 5704 5780 . - 2 ID=cds.g462.t1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . exon 5163 5381 . - . ID=g462.t1.exon3;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . CDS 5163 5381 . - 0 ID=cds.g462.t1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . exon 4383 5032 . - . ID=g462.t1.exon4;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . CDS 4802 5032 . - 0 ID=cds.g462.t1;Parent=g462.t1 NODE_1387_length_11643_cov_59.4757 . three_prime_UTR 4383 4801 . - . ID=g462.t1.utr3p1;Parent=g462.t1 #PROT g462.t1 g462 MTNQGDETGLARSRYFTPAEVETHSTSSDCWVSFLGKVYDLTPLCEENQGSILLKPILMFAGKDISHWFDAKTGDVKTYVDTETGRRVPYTPYGRFLDVPPKNPRSDWVVISDKPWWRKERLCIGYLSRKTRKVRIINTLTSQEQVVEVCSEETINEIQRRYLKYNSHAASYTWKYMGKQLDMESSLELNNIFDEGDEFSRLAMDEDEFLPAIHVYFNDDLTVE* # ORIGINAL: g7671.t1 original gene structure, not modified by PASA NODE_5117_length_1012_cov_39.6083 AUGUSTUS gene 1 801 . - . ID=g7671;Name=g7671.t1 NODE_5117_length_1012_cov_39.6083 AUGUSTUS mRNA 1 801 . - . ID=g7671.t1;Parent=g7671;Name=g7671.t1 NODE_5117_length_1012_cov_39.6083 AUGUSTUS exon 576 801 . - . ID=g7671.t1.exon1;Parent=g7671.t1 NODE_5117_length_1012_cov_39.6083 AUGUSTUS CDS 576 801 . - 0 ID=cds.g7671.t1;Parent=g7671.t1 NODE_5117_length_1012_cov_39.6083 AUGUSTUS exon 1 164 . - . ID=g7671.t1.exon2;Parent=g7671.t1 NODE_5117_length_1012_cov_39.6083 AUGUSTUS CDS 1 164 . - 2 ID=cds.g7671.t1;Parent=g7671.t1 #PROT g7671.t1 g7671 MGPSQDQSGFMAGVVAGLVTTSYRVGVLSGTPYAPLLRFVNGFLLGVQYSCLQCLVFREYVNSFFDITLGEQAAERLIQNGVDVMFAAGGAMGSGGILYASLKGIYVIGVDSNEAESTFAGKPEVQRSKI # ORIGINAL: g2690.t1 original gene structure, not modified by PASA NODE_5026_length_1073_cov_32.3918_potentialcontaminant AUGUSTUS gene 2 184 . + . ID=g2690;Name=g2690.t1 NODE_5026_length_1073_cov_32.3918_potentialcontaminant AUGUSTUS mRNA 2 184 . + . ID=g2690.t1;Parent=g2690;Name=g2690.t1 NODE_5026_length_1073_cov_32.3918_potentialcontaminant AUGUSTUS exon 2 184 . + . ID=g2690.t1.exon1;Parent=g2690.t1 NODE_5026_length_1073_cov_32.3918_potentialcontaminant AUGUSTUS CDS 2 184 . + 0 ID=cds.g2690.t1;Parent=g2690.t1 #PROT g2690.t1 g2690 IEQAIGRIKRNKTPEVSPLVIDILDTFGKFGRQNDARHNFYLKERYFVFEGARTAAPPRF* # ORIGINAL: g39.t1 original gene structure, not modified by PASA NODE_3690_length_2946_cov_37.798 AUGUSTUS gene 471 1643 . - . ID=g39;Name=g39.t1 NODE_3690_length_2946_cov_37.798 AUGUSTUS mRNA 471 1643 . - . ID=g39.t1;Parent=g39;Name=g39.t1 NODE_3690_length_2946_cov_37.798 AUGUSTUS exon 471 1643 . - . ID=g39.t1.exon1;Parent=g39.t1 NODE_3690_length_2946_cov_37.798 AUGUSTUS CDS 471 1643 . - 0 ID=cds.g39.t1;Parent=g39.t1 #PROT g39.t1 g39 MPSLGRTVNDLCWDANPPLIITPIVLPATYLRQPTTSRNDGLLRDVNREGSDGLRARIQQHHSSGNLEMTAFTRATLWTKDCVADVEKWRTHERDSLLTKSQFAGSASSDVGVLLDLLADIFPETHRGDVGEACDAEQCHEDAMGTTSAQANEMAGARADVDRLSFQLPLQAALIWSDGGAGAVRSSHVRGAILPLLTSQVLLLPHFTPSESFSSPISLNSLHDDRSSYTFDYNCDGSNGKLMDRTTLVNTTCAWAAPAECPQAHPASTVVPVAGVVESILMLAAVQAGRQTDASAILQTAGNWLRYKSSHSSMPVRPHVTNTSPPESARQRKQHQVHQKRCGRSWNVFDPTHGGKTGHTTRQPRHRPSHGTYSADSQRQEAHRPTSPCK* # ORIGINAL: g3122.t1 original gene structure, not modified by PASA NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS gene 308 619 . - . ID=g3122;Name=g3122.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS mRNA 308 619 . - . ID=g3122.t1;Parent=g3122;Name=g3122.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS exon 308 619 . - . ID=g3122.t1.exon1;Parent=g3122.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS CDS 308 619 . - 0 ID=cds.g3122.t1;Parent=g3122.t1 #PROT g3122.t1 g3122 MASLQEVDVILDEARQMLNSAIAPKQRQRALAKSHGQFARDFPTLFNMLVEDPSEITANRARTLIALSLQSQNGETSHDDATLDAGEFLAKEFIGGAIAAGKK* # ORIGINAL: g3121.t1 original gene structure, not modified by PASA NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS gene 75 265 . - . ID=g3121;Name=g3121.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS mRNA 75 265 . - . ID=g3121.t1;Parent=g3121;Name=g3121.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS exon 75 265 . - . ID=g3121.t1.exon1;Parent=g3121.t1 NODE_5744_length_731_cov_73.0473_potentialcontaminant AUGUSTUS CDS 75 265 . - 0 ID=cds.g3121.t1;Parent=g3121.t1 #PROT g3121.t1 g3121 MSRPVRCQTCGEVISNVARQYDEESAEIRALVAPAAEKEKRMEQLFDKLGLAKDKYCCRIPLF # ORIGINAL: g5500.t1 original gene structure, not modified by PASA NODE_982_length_15098_cov_41.6495 AUGUSTUS gene 1119 5523 . - . ID=g5500;Name=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS mRNA 1119 5523 . - . ID=g5500.t1;Parent=g5500;Name=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 5463 5523 . - . ID=g5500.t1.exon1;Parent=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 5463 5523 . - 0 ID=cds.g5500.t1;Parent=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 3911 5318 . - . ID=g5500.t1.exon2;Parent=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 3911 5318 . - 2 ID=cds.g5500.t1;Parent=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 1119 3816 . - . ID=g5500.t1.exon3;Parent=g5500.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 1119 3816 . - 1 ID=cds.g5500.t1;Parent=g5500.t1 #PROT g5500.t1 g5500 MSESTLYGICRSIDLTACGQGKTTLGRRLQSLFNGTAVTLEFVPVGEILRHYERLSTGACVAPHEPLRDLGASAAASGRTVELDGPQNDTPNPSRCTGTAPTGAEILKMHINSFFAQLDADNQTSGATGSGSGCERTKSESKATDAAEGGGSRAASRLLVIDGVKSESDARDVAEQLMGIRSRSSEGGNSPSVMTIYIAGGTYAKLRKRNTVRTAQGSRGDTTAQFEARMRKWEANAAGIMEVLRVCGALYSMRGSAVVACPICNKPECWSTTGKCDRPQRDTAYSGDMLHTALCAATTRKKFDKAWFRTPGSDEFAPATLRLVVNATAADRILTLCSTFVFGEVFVQNIAQPTQNKADSVDSDACCGSDAASQDNSANSRNHPRRTVRPSLPSTMLQLPPQGEPLAVGNIPADNFCVARKCDGVRYMAVIVDEDETTSTTSAATEGTRLRRRAYLINRREFVFEAPLVGPGIPSNTVMDGELVRSQDARLVFVAFDVLCAGGERVWTRTLNDRMEVLRSFSLPLCTATPAIPVAVADISGMRNGHGHRDVGPGDDLAFDEQQIAIPIVFRDQKTVTEETVREELTSSWIPSDGLIFTPRQACYAFDRDPLTLKWVPVSALSIDITHAHVEENFRLASRQLVTQGFLSHKGPKYYPGLLVTLKKGLRELCVRSDKRTANSAEVIAEVIGTHERAVTGWKRYLNEQIAPKSKKTPTTPTDTARACGALAVRAQSLTATGASNRFLESPIAMAAPASVLSGVGSCGAGTSDTTTDVTRHGSHPARSFHPAKVADALEAASSQGIIQASVVKRDGDTKHLCVYNYRRGRNLDLAMETMDSSNASGSISAPIDTAVLLSIARGIVVNVADKTVVATPFVQFDAAEVREVASAGRAVYEVSSGDAAEATVKIDGTMGTLFLWEGQPLVATRRRFDSEQAIWATAWARAHIPAAGLEAGWTYLCEIIYDNNVHVVKYPYEGLVLLAVFGPDGTESSRDGLVSIAKRLQVPVPTMLHGPFQDLRAATMRMCDMSHRRSKSVREVIPTVEGWVVRRCSDGKRHKVRDGLYEECAAAIAGVTPLEIWRGIYDGRISLNATETASHGSVVLAGLRVSAHHVAEVRGLAHAIDIHVRRIFKSIVERETGCARHAKMRAYLSDTFGEHAEAMYDKIEAEVDAELAAVRTGATSGTGDPKATAKAKEARIKEAQDHLVQMDAFLKSQTFPPAVTSTFEPLGRLSLDKRLRCMALQCVKPHHNATHYPGYSPSASFAQTFVKGWASRRRSSVQDGICGLLNLPPELVHEIASRLPAHSLAIFASTCHAVRAVVAESKLLRARVRSAQKALIVARIRTQQAQQARQEAIARRRHVGSDMDDDNVYNFWGERYEEESENDNDWY* # ORIGINAL: g5503.t1 original gene structure, not modified by PASA NODE_982_length_15098_cov_41.6495 AUGUSTUS gene 12801 15021 . - . ID=g5503;Name=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS mRNA 12801 15021 . - . ID=g5503.t1;Parent=g5503;Name=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 14830 15021 . - . ID=g5503.t1.exon1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 14830 15021 . - 0 ID=cds.g5503.t1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 14466 14579 . - . ID=g5503.t1.exon2;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 14466 14579 . - 0 ID=cds.g5503.t1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 14139 14212 . - . ID=g5503.t1.exon3;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 14139 14212 . - 0 ID=cds.g5503.t1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 13769 13843 . - . ID=g5503.t1.exon4;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 13769 13843 . - 1 ID=cds.g5503.t1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 13359 13463 . - . ID=g5503.t1.exon5;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 13359 13463 . - 1 ID=cds.g5503.t1;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 12801 12957 . - . ID=g5503.t1.exon6;Parent=g5503.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 12801 12957 . - 1 ID=cds.g5503.t1;Parent=g5503.t1 #PROT g5503.t1 g5503 MLLMTLTFVLTLTVSIQAGILTGVGLSVVIVVKHTTLPHITVLGRVSDTGAFCAVGQCAAEPIEGLLMLKLEESLYFSNTGQLKDLLKRIEMLGDVHIHPVQVEYVTVPPITGVVFHLKGVPTIDASAVQILMEIVEDYIRRDITVCFVKPRDNTRKLFEMSGLSELLGDNIFTSMKDAKAFIERARAPEKSLSRSNSIASIRRASTPVHIGIIRQTSLPVGSFGTPRRSSALGQSLY* # PASA_UPDATE: g5501.t1, single gene model update, valid-1, status:[pasa:asmbl_10222,status:12], valid-1 NODE_982_length_15098_cov_41.6495 . gene 6679 8630 . + . ID=g5501;Name=g5501.t1 NODE_982_length_15098_cov_41.6495 . mRNA 6679 8630 . + . ID=g5501.t1;Parent=g5501;Name=g5501.t1 NODE_982_length_15098_cov_41.6495 . exon 6679 7527 . + . ID=g5501.t1.exon1;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . CDS 6679 7527 . + 0 ID=cds.g5501.t1;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . exon 7782 7916 . + . ID=g5501.t1.exon2;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . CDS 7782 7916 . + 0 ID=cds.g5501.t1;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . exon 8092 8630 . + . ID=g5501.t1.exon3;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . CDS 8092 8439 . + 0 ID=cds.g5501.t1;Parent=g5501.t1 NODE_982_length_15098_cov_41.6495 . three_prime_UTR 8440 8630 . + . ID=g5501.t1.utr3p1;Parent=g5501.t1 #PROT g5501.t1 g5501 MDNDNAARRHERFGGGQSSTSATGASNPLGGPSTGAPGVNLARSVDVFGLISKGSGDSGDITVSLRNVANQYALHNLVLRMRKDVEAKAVTTPSGNGDAAERAEKARLDALRHITLQYRKLREGIVSTNAMFVDAECALSSTDAANSPDPLGSIASRDHNVFALRIYEEAADVSIEAGELSEFLKCVSSLVTVIYPALYSDGVPIGTESECEGGSAARQDGQLAVTPSLKQDLASVTTASPCVRECAFAGLYLLYYVCVVGGGEADNASAVDVALVLSHMSAHLVVVVLQSSEVAFALRIHTAVCFGDYVTFFRHYGNATLHQRTVMDAAVPTMRSRAIAVIAKAYMNLPSRKICSILGYYVATTHLRTSRSTSAADSAFYDGNDAGGSRACEERRGDAVPVEDNLDDVESFLVRKCGVKQEQLSADRRLVTFKIPASGARKS* # ORIGINAL: g5502.t1 original gene structure, not modified by PASA NODE_982_length_15098_cov_41.6495 AUGUSTUS gene 8840 11551 . - . ID=g5502;Name=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS mRNA 8840 11551 . - . ID=g5502.t1;Parent=g5502;Name=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 10385 11551 . - . ID=g5502.t1.exon1;Parent=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 10385 11551 . - 0 ID=cds.g5502.t1;Parent=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 10033 10094 . - . ID=g5502.t1.exon2;Parent=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 10033 10094 . - 0 ID=cds.g5502.t1;Parent=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS exon 8840 9779 . - . ID=g5502.t1.exon3;Parent=g5502.t1 NODE_982_length_15098_cov_41.6495 AUGUSTUS CDS 8840 9779 . - 1 ID=cds.g5502.t1;Parent=g5502.t1 #PROT g5502.t1 g5502 MAIVGHIIYYHLYIPLARALPPFITPNHITILNAILQIVLWFVLQRRGVYREYERDIDGRPSAPDCPDLEAAVGADSLSELTQPYDDDGAVNPPSACAHGAQEAQGIFPVAVVGEPAGCGLTGFHKRRQSAGVTITAADQPPPYIENPRLPSRDASRVACAAEPQGMTAPSVFLSSEFASEFLPSGGASELSSCRTRRYPPFPRLLVFLAIASYTILDNLDGIYARVQQTELQRAIDTPSDVLTHYVGPIMTANERHEAVLRKAYATGSPSPATVRADVIIYAPGEFKDTPGTRDALLTASVDSTLFMSQRVPSNATASSMETGATGTTLGALSNLQTSALATIYSSSGDVTIGKYMDRCLDAAFQPITWSYVLQWHRFGSPWYYVLDVFAVIAHLGTNMLSSSAKTNGSISYNPEIDLFGITDDDVMWTMIVSVLIPRGWFEYPLYATILGITAHTIYTAMIHANGVRIFAMMGIVATFLVRLHSAATAQERREDALSTLKATMRARDVIRQKWNRAMSKRCDSAQSGDVCASALSVRPRRHTFTGGFALNPPTLSKASGDVGHTHFCVPEGNSIFESVPVSCHDPPDHHTVYGGMNENRLSTDAHTRATVDTMAVGGVAMKSDAAACVSSAAVVIALIAALDIALVADFFLVEANPLFPYVYCFLVLLLSCHVDRSLLCIALGLAGLIYIQTIRVFGSAPGGFLWNAVHPGMATVAASTH* # ORIGINAL: g7122.t1 original gene structure, not modified by PASA NODE_4195_length_2039_cov_42.6538 AUGUSTUS gene 22 1893 . - . ID=g7122;Name=g7122.t1 NODE_4195_length_2039_cov_42.6538 AUGUSTUS mRNA 22 1893 . - . ID=g7122.t1;Parent=g7122;Name=g7122.t1 NODE_4195_length_2039_cov_42.6538 AUGUSTUS exon 22 1893 . - . ID=g7122.t1.exon1;Parent=g7122.t1 NODE_4195_length_2039_cov_42.6538 AUGUSTUS CDS 22 1893 . - 0 ID=cds.g7122.t1;Parent=g7122.t1 #PROT g7122.t1 g7122 MVVISMTARSVDRAINEPECVAAHASGSASFSVSAGALIFLNGCDGFALDDHASAVTDAMDIWVMFPDGTAPVPVQYFWKTDGLSRLRVVGGTLAALQFMSTYQAIGVFLGSSSVTFEDISVPYVVGIYDDPTLSTDFLDVVKSPQFIVSGNATAAFTRVSLKPDVWSVNNFLRGKHAFLVSGQASLSIDGLSCDKCPGVVHAIERASVSVSNVTVSGDNTMPPDKYSWLDDFPLNLRDPEVVAGTLFWLEGSSTFSASHVRLTRLARAIRGGVGYVGDDARATIVDMVAFTVGGCHILGGGFYVGNRGQLHVEDSSFSKTFSMCDFGIKRPGGQGGFVYMDGDSHVVIENVSFHQLQATDGGFIYATGNARASVNGAHIATTSASNQGGGVYLGGSASAHVRNMVASEVFAGTEGGLFFATDLSTLDADAVDLHDSESYRGAVFSSMGSATVRLGHVASNNTLCDQLFAGGSINGIIVWELRRLAEFRLVPDSVYTSTDPFGALSGCALYASDSSVVNLDTVSVNSVNTRYSTGGLSMSGYASLSAANVSFSEIQSRREGGALRVDFRASLSAQNVTIIDIDSKSIGACGIAVGDASMRIKELHVENCVSFGGGCFHAVDSAN # ORIGINAL: g4675.t1 original gene structure, not modified by PASA NODE_2025_length_8043_cov_39.7317 AUGUSTUS gene 549 5535 . - . ID=g4675;Name=g4675.t1 NODE_2025_length_8043_cov_39.7317 AUGUSTUS mRNA 549 5535 . - . ID=g4675.t1;Parent=g4675;Name=g4675.t1 NODE_2025_length_8043_cov_39.7317 AUGUSTUS exon 1081 5535 . - . ID=g4675.t1.exon1;Parent=g4675.t1 NODE_2025_length_8043_cov_39.7317 AUGUSTUS CDS 1081 5535 . - 0 ID=cds.g4675.t1;Parent=g4675.t1 NODE_2025_length_8043_cov_39.7317 AUGUSTUS exon 549 839 . - . ID=g4675.t1.exon2;Parent=g4675.t1 NODE_2025_length_8043_cov_39.7317 AUGUSTUS CDS 549 839 . - 0 ID=cds.g4675.t1;Parent=g4675.t1 #PROT g4675.t1 g4675 MVSTAMLRFVWGAGIRHHTRGGRSSVPSFLLFASICFFVSIRCGQAITFTEIVRRAAAGDVVGLASKGTLAFSTAEKRWVFSMHTSRESLAWADASDDGKPQLTLTGSVQTGNITSLSIDARDARITCQDNYSTPLVLSDSYLELRNFSLADCSDADEVDAVGMRYASILRVLEDAKLDLTDAYFGGFQGIRVADVSGSITMQRVTIENANIGDNLPPCASFSGDDCGGGALLRLDGRSRATLVDCAAYTIQCKQPKGAVFTVGGESIATAVRWKSAYTNAAGAGIAYTSEYASLLFVDADISHSYASVSGGVLIIYDYSTVTFEGGSISDVSAEINGGVASVQYLSVLTLIDLHVTAAHARNGGLAIAVRNATVHVTRVVVVDATADASGAGGFIAAEGDAAIHVTNSSFTGGFARYGGVFSLDGRVNIEVSGGTAVNCNSVDGGGFADLNGDVRARMTGVTWSGSSSPVASVFATFDRANLIVDSCIAFDMQAEKFGAFVLSYQYSDVTLRNSTFMGMRCASVCVAGAYLGAVVTFDNVDVYDSISTGELGGVGEVAGTSAVIYANRLRVHGASARQGGVFSVKTSGRLVVRSSSATNIFATMNGGFVSVIDSGRVDIDGLTIVGASATNGGVVCLEASGQAQMSSCVVVNATVSSSGGFMALFDQTSARVNAVTVSTASAGVTGGSFYVAGNAHLNVSGINVTDTLSAFDGGFLHAESAVFVQASSLSLNGAIAADGACFAVYDDARVILDNVIASRAVASESGGFAMVQNNARMDVSGLDLASSSAWNGGAFCLYGTAEVSVTNSRIRDVFAADFGGFARVRNSAIFEFTNGTLVNATAAFGGAFLLETLARIHASNVSADNVRATDFGGFINAQSGGVVDITGLTLRNAYASNGGAFFIARSSALTVEASSIDGAHATDEGGVLYARHLSRVAMGNTSVSHATAAYGGVLSAYGNAHIAMSLCTFYKTEATEEGGFGRVGEEASVVVDRTSVSLSSALIGGVLSLSDNARVNFTASHATGFSVTSFGGFVHSRDTSLLVVSESRMHSGEAQTGGLLHAVGASVTRLVDVAVWNVSARASGGCMYADEGSTVVMGGGNYTDCHAGVVQTTGGAGGVAFVGTLAKLVVNAPIYVRTPSAVLGPAFYSDSVIDDRSRSHVVLVDNQLSGSDVEQILPGWQTGGLFASSPASLVLHDVNTGNVVSGLTVTSGEPFPALSLEIIDGYNTLISTDGKAQLSIRLEASTEKVSPLAVSPSSVSGNGTTATTTARAILRGDVERSYGTRAVVTFNDLKLFAAPGKYVISAVSANPFLYGGLDADVRRQSFLSNFSVGVTVVPCSGESVDVQFDGGVSLPQCVSSGSSNTRVLAIALSTAIVGGGAIVAALVAIRWRIAAGLRLKLSRETHAEFVEKHLSKQADLVALELERERVELLEKLGEGEFGVVYRARMIPEDGRPRVCAGKMLKEGASFHERCDFLQEATVMQGMNHPHVISLCAIVAVDEPMLILIEYAPHGDLLSFVRSVPASHRVRGSASVQMLETFCGHIAQGMAFLAEMKVVHRDLAARNCMVGQDAFGEMSSL* # ORIGINAL: g11021.t1 original gene structure, not modified by PASA NODE_2542_length_5960_cov_47.4958 AUGUSTUS gene 2078 2431 . + . ID=g11021;Name=g11021.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS mRNA 2078 2431 . + . ID=g11021.t1;Parent=g11021;Name=g11021.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS exon 2078 2431 . + . ID=g11021.t1.exon1;Parent=g11021.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS CDS 2078 2431 . + 0 ID=cds.g11021.t1;Parent=g11021.t1 #PROT g11021.t1 g11021 MEDVCRHKHKHIHGHKDCAANGGRCMHTLRAVGEFNLLRSNLNRKYSCDITCHGNTKPATAVPNVAAAASAMLFPPQYHGDSRLNTARCEAKTMQLHPRVQLHPWLRATASHKKNVP* # ORIGINAL: g11020.t1 original gene structure, not modified by PASA NODE_2542_length_5960_cov_47.4958 AUGUSTUS gene 424 1840 . + . ID=g11020;Name=g11020.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS mRNA 424 1840 . + . ID=g11020.t1;Parent=g11020;Name=g11020.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS exon 424 883 . + . ID=g11020.t1.exon1;Parent=g11020.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS CDS 424 883 . + 0 ID=cds.g11020.t1;Parent=g11020.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS exon 1014 1840 . + . ID=g11020.t1.exon2;Parent=g11020.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS CDS 1014 1840 . + 2 ID=cds.g11020.t1;Parent=g11020.t1 #PROT g11020.t1 g11020 MLSGCVGTEVFAVGVLSVQKGTGCGTFGLIPAIPGAVWRLDVTNSQPTGTVTVFPSRTWTLATFASFTHWSDLAVAATALFGSGGRLRPSLSLVVSANYVPEGLRAVFPTSLSLVGIDIEFSKQHDFVPDALENAVSKFSVTCDKWSTFNFEGRQNTFDLTVYVEHRAPPSINASTATPTVARVEWRQPIRLNTGVPGCGTHCSAALLRSYPQKCLQSSVSMSAINRSTVRGLNPTAQVRIAVSRVSGPNGTWILPYGISLSNSLVPALGNVTQVPTVPRTTVVRMRISARVSAITWTSRACRASIIVQDVRFAPAVTLHDSTLLSVGVHFQSDHAAAGAYRRTLLSDTAFRSAGMGEGIAKEGVSLASIEWAAECPLDVLQDGANMLRLAAVARYSGANAGNVRVGGSVMAFTLDMPPMGSRRALCL* # ORIGINAL: g11019.t1 original gene structure, not modified by PASA NODE_2542_length_5960_cov_47.4958 AUGUSTUS gene 60 244 . + . ID=g11019;Name=g11019.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS mRNA 60 244 . + . ID=g11019.t1;Parent=g11019;Name=g11019.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS exon 60 244 . + . ID=g11019.t1.exon1;Parent=g11019.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS CDS 60 244 . + 2 ID=cds.g11019.t1;Parent=g11019.t1 #PROT g11019.t1 g11019 TDCPSVLRRACLLRHCARPLFVRLQSCRRVPLVWLSRSCCQHHSRRLCSRGMEWQTRRSFP # ORIGINAL: g11022.t1 original gene structure, not modified by PASA NODE_2542_length_5960_cov_47.4958 AUGUSTUS gene 3656 5527 . - . ID=g11022;Name=g11022.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS mRNA 3656 5527 . - . ID=g11022.t1;Parent=g11022;Name=g11022.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS exon 3656 5527 . - . ID=g11022.t1.exon1;Parent=g11022.t1 NODE_2542_length_5960_cov_47.4958 AUGUSTUS CDS 3656 5527 . - 0 ID=cds.g11022.t1;Parent=g11022.t1 #PROT g11022.t1 g11022 MVMRQDVDGMNAGFFSQRLGATRPRVIVLSVIIATIIWSMAFLTFFGYAGVGPAHLFSVGEWVTRVRGADAPGGQKVNVFMAGVVGAAPAGNLAGQLQVDSGVRGPDAVALPVVQSTSETHTHQQSESTPGPVVRSGHPDTFQSVVMSRPSLSQATVLFSSAGIATSVSLNQPLGVRVATAAVQNSEAPSALSVRVSEQTTAMALSITVGHVQGFAGGEQAGTTAVAVSIHPTSTLNPLPQPTSTQRDAITDAVAALAMSPSVNRDGAGFDSTASAATVSSPSLADITTFAISVADAPSAESLKAFNDVHSACLHYSPDDSYIRSTAANCKWPSVPPVRFGRPRVDSVGITCELLLKIVHEEMFIKRRYGYYVNAGTALGAIRDGGLLYGDTDVDLHVFVPNVKLSDRTCAQGVGEYSPQANVTYVATLNAMVNVSVSQYGVKTSWHQPVEEVQNYIRFNGEMTGDATGQCGADLVFTPFELSGEPPFCNCPFGHDGAVRRCTEDVPAYVSTFYGGTWWLRMPEFKGFASIRLGPKAGLNAKTYSQISALMQPLETADSDRDGKLNGTELLAALYKQGMPDQDVQAMATDHWSWLEAQLPRVNYIYEFARNLTMFGPDFCAAY* # PASA_UPDATE: g11653.t1, single gene model update, valid-1, status:[pasa:asmbl_1882,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 30454 32218 . - . ID=g11653;Name=g11653.t1 NODE_152_length_34540_cov_65.7591 . mRNA 30454 32218 . - . ID=g11653.t1;Parent=g11653;Name=g11653.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 32179 32218 . - . ID=g11653.t1.utr5p1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 32136 32218 . - . ID=g11653.t1.exon1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 32136 32178 . - 0 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 31969 32049 . - . ID=g11653.t1.exon2;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 31969 32049 . - 2 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 31767 31886 . - . ID=g11653.t1.exon3;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 31767 31886 . - 2 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 31582 31674 . - . ID=g11653.t1.exon4;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 31582 31674 . - 2 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 31359 31489 . - . ID=g11653.t1.exon5;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 31359 31489 . - 2 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . exon 30454 31247 . - . ID=g11653.t1.exon6;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . CDS 31119 31247 . - 0 ID=cds.g11653.t1;Parent=g11653.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 30454 31118 . - . ID=g11653.t1.utr3p1;Parent=g11653.t1 #PROT g11653.t1 g11653 MPPKTKPKKAAGDGKGDSQQLSLQEKFDRATHEIEALKRALGARSELASRAEISREEAIDQLEELQGKLDEQTEVRNVISSDMTRQYKSMQSQMIKRVNALETQVARLTDELTHTKQALSESERDKAELLAERDKTIESQRNKIATMESFYEHMVHDALDRMTRKIEIAKDKWEAEASSRQLRNKELLAQFGLGHLDL* # PASA_UPDATE: g11646.t1, single gene model update, valid-1, status:[pasa:asmbl_1883,status:3], valid-1 NODE_152_length_34540_cov_65.7591 . gene 11673 14914 . + . ID=g11646;Name=g11646.t1 NODE_152_length_34540_cov_65.7591 . mRNA 11673 14914 . + . ID=g11646.t1;Parent=g11646;Name=g11646.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 11673 11892 . + . ID=g11646.t1.utr5p1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 11673 12021 . + . ID=g11646.t1.exon1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 11893 12021 . + 0 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 12107 12180 . + . ID=g11646.t1.exon2;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 12107 12180 . + 0 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 12291 12428 . + . ID=g11646.t1.exon3;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 12291 12428 . + 1 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 12533 12853 . + . ID=g11646.t1.exon4;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 12533 12853 . + 1 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 12985 13133 . + . ID=g11646.t1.exon5;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 12985 13133 . + 1 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 13262 13707 . + . ID=g11646.t1.exon6;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 13262 13707 . + 2 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 13821 14108 . + . ID=g11646.t1.exon7;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 13821 14108 . + 0 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . exon 14205 14914 . + . ID=g11646.t1.exon8;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . CDS 14205 14738 . + 0 ID=cds.g11646.t1;Parent=g11646.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 14739 14914 . + . ID=g11646.t1.utr3p1;Parent=g11646.t1 #PROT g11646.t1 g11646 MPAVFGNESLYVRACAAVARDWRTHVASLPLLPPEVLVCVLDALRSSGDTVGLKAVLEDWASLCVCMRNGPALLGEFQAILDTCPSNLPRIPQLFLSRLDCLREGRAERDAGQRNSVPCRIPLPFAGEYLFTGGRRSRNVTVACSVDDSHGVCDAMQNSDWMAQADEVRCLAMALGATFMSLGWGLFALQTLEVCLATMPPADEPGVSESVLLQHYAALTRYGKALHTCCRYVEARGAFNAALQLKLLHPFLPNPAFVYALMSELYGTKCNLLESQQFAELALVACDSDVTRVTERERIFVLRTVSRMCIGRRQFPRARGYLQEALAIAHAAYGKSHPILSGVLSDCGHYLLNVDQPHVAAGVLHGALTQRAKTFGLHSVRVGQIATDLAYALYVHHYTTVQFGEAKLFADLGLHIFQQAKDVVVTDLMCAFSMRVTALILEEIAIDQGLPFDTGVMQVVRTYQEAGLATCVRLFGENNLNTAKFYGNCGRLYQTMREFELSEEMHLKALRIKEKVMGPNDLEVALSAGHLASLYNYDLKRYSEAEALYLQSVRIGIALYGESYSGLEFDYAGLASLYASSNLPQKRADYEMRLSEWERLRSQAETRAERATDWGVDSAVDELDDALPGDPFSFRLDIHIDGDADSGDDGSDDGSDDGSGDDTDDGSGGDAENDGDDDNDGDDSEAPAAIPI* # PASA_UPDATE: g11652.t1, single gene model update, valid-1, status:[pasa:asmbl_1884,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 30445 31556 . + . ID=g11652;Name=g11652.t1 NODE_152_length_34540_cov_65.7591 . mRNA 30445 31556 . + . ID=g11652.t1;Parent=g11652;Name=g11652.t1 NODE_152_length_34540_cov_65.7591 . exon 30445 30507 . + . ID=g11652.t1.exon1;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . CDS 30445 30507 . + 0 ID=cds.g11652.t1;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . exon 30626 30698 . + . ID=g11652.t1.exon2;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . CDS 30626 30698 . + 0 ID=cds.g11652.t1;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . exon 30804 31556 . + . ID=g11652.t1.exon3;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . CDS 30804 30979 . + 2 ID=cds.g11652.t1;Parent=g11652.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 30980 31556 . + . ID=g11652.t1.utr3p1;Parent=g11652.t1 #PROT g11652.t1 g11652 MFFNVIHRVLQSVAHQHITQRLLQSPLFHRFVQHTEHKLTQAETIGRESLERARRSQVAGRLAGTAQSLADEAKGRVSVFTTALARNLKEQAAEAARRQSRKG* # PASA_UPDATE: g11644.t1, single gene model update, valid-1, status:[pasa:asmbl_1874,status:3], valid-1 NODE_152_length_34540_cov_65.7591 . gene 5461 9843 . - . ID=g11644;Name=g11644.t1 NODE_152_length_34540_cov_65.7591 . mRNA 5461 9843 . - . ID=g11644.t1;Parent=g11644;Name=g11644.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 9724 9843 . - . ID=g11644.t1.utr5p1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 9462 9843 . - . ID=g11644.t1.exon1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 9462 9723 . - 0 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 9241 9323 . - . ID=g11644.t1.exon2;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 9241 9323 . - 2 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 8306 9149 . - . ID=g11644.t1.exon3;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 8306 9149 . - 0 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 6824 8037 . - . ID=g11644.t1.exon4;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 6824 8037 . - 2 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 6521 6641 . - . ID=g11644.t1.exon5;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 6521 6641 . - 0 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . exon 5461 6406 . - . ID=g11644.t1.exon6;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . CDS 5511 6406 . - 2 ID=cds.g11644.t1;Parent=g11644.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 5461 5510 . - . ID=g11644.t1.utr3p1;Parent=g11644.t1 #PROT g11644.t1 g11644 MSEVMDAAPSGPPPVADHSGHRTVPTTGHSHSVAGLSGLTGLTGLSEMPDLSGSKHHGALGDGPSQPASQARLSTLFKADAEAFGRSAPKASVVVADEAKKGSTFSVYLATTETMWGVIIFLRFAEVLSHAGLVLTLGTIWMSAILIAMVATASCAIATNGFIPYGGMYHILTKNIGHAMGGSIGALYYMGLVCLSATEIRGFSEAIESTMTMQDVDIPDLHGSYWFGTIISLVAFVVVCTLARNHLINEAIGIIVLVAVLCSFAATIVGGFATSGGWAVNNATGVYGLSTTLLADNAWPLWDGWDFRKILTFILPCFVGIFTGPNRASSLKSPYTSIPIGTFGAILTSAVLYSLLMVIMAATTTRDTLRLNLSMREIAWPSKYVVVAGMLLVGIGAAMQLQSTAPGILRAMAKDAIIPQIKRLRLDKPGRTEVVSMMIAIPFVFIPDLDNLATVVTLVFLLCYGFTSLACLSLQLLRLPGWRPKFRYHHWVLSLLAFLLTQIAMFAIQWIAAMLMVIAGFVLATMIQVLNADATWGSGTRAIHANLALSSLLSLEGSELKAGGRGNWRPQVLMLADMTEDNQLRHPRLVSFLHQLRKSKGLTIIGAIVNSEGRTLSECGEHVAHARASIRSAMAAEGLKGFGEAVFAPTLSIGRSMIIQQSGIGAVRPNSVLVAWPDGWREDASLAAQIVAVVEETQVSGKALIVARGIESFPLTSERMAGSVDVWWIVHEGGMLLLLGFLLTKHRVWKKCRLRLFVVAEFEDNSVAIEAALKNLLINLRISAEVTVVEMDAIDFQPFMQEWTVRLERRQETRKGVFPDELEDLASMALAPRESLFRRPSDSKERLRDEASDEAVGRPPSALHPQSGLSAKGTPVAVVRQTSHRSARLSTASTASGAARGSSASDSRSDTAKLSAAASPSSPSLSQGRGSVARDHTEIAMTVFSSSTAHAAGSPASPAVSRTDEESPHDAVHISRFLVQDASVVDIEQRHSLALPSDAAQPPSRSSVADSALDPVMTAADPTLGLRKRAHIVDPKDAHETHNTAREDSDGFFHYRADDGQTDAQRARKRTLAAVRLRQAVEALSSEAALVIMNMPLPDEAGREDPSRYMELLDGLTEKVPRVLLVMSSGQQVVSEFVE* # PASA_UPDATE: g11649.t1, single gene model update, valid-1, status:[pasa:asmbl_1876,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 21311 23080 . - . ID=g11649;Name=g11649.t1 NODE_152_length_34540_cov_65.7591 . mRNA 21311 23080 . - . ID=g11649.t1;Parent=g11649;Name=g11649.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 23027 23080 . - . ID=g11649.t1.utr5p1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . exon 23024 23080 . - . ID=g11649.t1.exon1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . CDS 23024 23026 . - 0 ID=cds.g11649.t1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . exon 22726 22810 . - . ID=g11649.t1.exon2;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . CDS 22726 22810 . - 0 ID=cds.g11649.t1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . exon 21830 22326 . - . ID=g11649.t1.exon3;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . CDS 21830 22326 . - 2 ID=cds.g11649.t1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . exon 21311 21626 . - . ID=g11649.t1.exon4;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . CDS 21396 21626 . - 0 ID=cds.g11649.t1;Parent=g11649.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 21311 21395 . - . ID=g11649.t1.utr3p1;Parent=g11649.t1 #PROT g11649.t1 g11649 MTEQQLDCALDLMRRLPPQQIEENLAGLIDLVPSLCEDLLSSIDQPLKVAKDKASNKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGATPSDKLRKLEVEANQAFDTYREMYFEGGVSSVYLWDLDHGFAGVILIKKLGDGSKSIKGCWDAIHVVEVVEQGKNAAHYKLTSTVMLWLQTSKSASGTMNLGGSMTRQAEQDFPVNDANPHIANIGHMVEDMEIKMRGTLNEIYFGKTKDIVNDLRAVAGLGEQKKKMAMQAEIANTLRKRGGN* # ORIGINAL: g11643.t1 original gene structure, not modified by PASA NODE_152_length_34540_cov_65.7591 AUGUSTUS gene 3825 5444 . + . ID=g11643;Name=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS mRNA 3825 5444 . + . ID=g11643.t1;Parent=g11643;Name=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 3825 3827 . + . ID=g11643.t1.exon1;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 3825 3827 . + 0 ID=cds.g11643.t1;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 4108 4274 . + . ID=g11643.t1.exon2;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 4108 4274 . + 0 ID=cds.g11643.t1;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 4587 4733 . + . ID=g11643.t1.exon3;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 4587 4733 . + 1 ID=cds.g11643.t1;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 5000 5208 . + . ID=g11643.t1.exon4;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 5000 5208 . + 1 ID=cds.g11643.t1;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 5338 5444 . + . ID=g11643.t1.exon5;Parent=g11643.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 5338 5444 . + 2 ID=cds.g11643.t1;Parent=g11643.t1 #PROT g11643.t1 g11643 MVDDAAAAVTTEERYERMTMRELNGAAQASDDIRDDDEDRMLHEYRRVLPLFDCAVEARRLAELRAQSCKESFGDVLELHSRSTFVAEVTSAREGLWVVCLLYGQRDDNSALLGNALATLASKFPGTKFTRILAQRCIADLPESAVPTVLVYLSGTLQRQFTGLQAFGGRRMTVEDVEWELGQVGAVHTDIDESPHVTVANRIFVNIQRK* # PASA_UPDATE: g11651.t1, single gene model update, valid-1, status:[pasa:asmbl_1879,status:12],[pasa:asmbl_1880,status:12],[pasa:asmbl_1881,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 28331 29983 . - . ID=g11651;Name=g11651.t1 NODE_152_length_34540_cov_65.7591 . mRNA 28331 29983 . - . ID=g11651.t1;Parent=g11651;Name=g11651.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 29925 29983 . - . ID=g11651.t1.utr5p1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . exon 29823 29983 . - . ID=g11651.t1.exon1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . CDS 29823 29924 . - 0 ID=cds.g11651.t1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . exon 29051 29712 . - . ID=g11651.t1.exon2;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . CDS 29051 29712 . - 0 ID=cds.g11651.t1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . exon 28636 28922 . - . ID=g11651.t1.exon3;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . CDS 28636 28922 . - 1 ID=cds.g11651.t1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . exon 28331 28487 . - . ID=g11651.t1.exon4;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . CDS 28384 28487 . - 2 ID=cds.g11651.t1;Parent=g11651.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 28331 28383 . - . ID=g11651.t1.utr3p1;Parent=g11651.t1 #PROT g11651.t1 g11651 MATDRKTLYPYILSFLSENGLKATAKQFMKEAAVKDGSAPAGDSLWGIYSAYQESKKRKAESDSESEEDSKPAKKQAKKEESSSDSDSSSESEDEAPKKAVNSNGKGTPKKAESSSSDSDSSSASEEEAPKKKAAAKESSSDSSDSSDEEKEASNEEEEEKGDVEMNDEEEAAEEEEEEEEPKSGRDSATPNKVNRQRSDGTFDDATKSAPTKTLFVGNLSWNVDEDLLRQHFSEQENVIGTRIAMDRETGRAKGFGYVEFGDVESAQAGLAALDNSELDGRNIRLDYASDRRADGGSGGGFGGARGGRGGFGGRGGRGGSPGFGGGFGGRGGSRGGRGGFGDRGGFGDRGRGGRGRGAPRGRGAPARNTGGVQEYKGTKVAFD* # PASA_UPDATE: g11650.t1, single gene model update, valid-1, status:[pasa:asmbl_1877,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 23318 28065 . - . ID=g11650;Name=g11650.t1 NODE_152_length_34540_cov_65.7591 . mRNA 23318 28065 . - . ID=g11650.t1;Parent=g11650;Name=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 27959 28065 . - . ID=g11650.t1.exon1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 27959 28065 . - 0 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 27389 27824 . - . ID=g11650.t1.exon2;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 27389 27824 . - 1 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 27105 27264 . - . ID=g11650.t1.exon3;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 27105 27264 . - 0 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 25919 26032 . - . ID=g11650.t1.exon4;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 25919 26032 . - 2 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 25485 25662 . - . ID=g11650.t1.exon5;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 25485 25662 . - 2 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 25167 25387 . - . ID=g11650.t1.exon6;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 25167 25387 . - 1 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 24957 25093 . - . ID=g11650.t1.exon7;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 24957 25093 . - 2 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 24709 24828 . - . ID=g11650.t1.exon8;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 24709 24828 . - 0 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 24540 24611 . - . ID=g11650.t1.exon9;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 24540 24611 . - 0 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 24189 24379 . - . ID=g11650.t1.exon10;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 24189 24379 . - 0 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . exon 23318 23987 . - . ID=g11650.t1.exon11;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . CDS 23348 23987 . - 1 ID=cds.g11650.t1;Parent=g11650.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 23318 23347 . - . ID=g11650.t1.utr3p1;Parent=g11650.t1 #PROT g11650.t1 g11650 MAQPDETNAPDGGISSFDYLQHEAKRTSMLDIISDKLRQQGKTVVLERVVFVARLSGEKKDLSTYYQRFFQAHQRDDEFITGLLLVYPKYLLHVVEAPPRVIGAVLRDAAESERNGGVIRDARVLILSGDSPLRLFPMWTCRVLPVTGGEASNAPEDVSSAVIDCIKQVLKLGSHLARIPKNELKGTLDKLAERLPEHIPSQDAVGAFVESEKLFPVAKFCDSFYSPINVVLDNDTNLSPSTGDMCIVSSDAEVTEALRLFRTSTERTLTFYDTVHRHGAIRREKVHRIKNHAFVAKHFHQPTFCSHCGEFIWGLGKQGYNCEYCNVVVHKRCHKQVEALCLASVAPPDSNGAPHKFTLHNYKKPTFCAHCGSLLYGLFRQGLRCTGCKMNVHKRSVWLVLFRVHDVSNRCLRTAHQRGTHTLAYRGLLVVPMHGGKLLRLHQQKTYGVLWSGKKRASLDDFNLLSVLGRGSYAKVMLAEEKGSGHLFAMKIIKKERLLQDEDLDWILIEKHVLQLSAHPFIVGLHSCFQTESRLFFVAEYAAGGDLMSLMQRERRLTEPHARFYASEIVLALRFLHGHAVIYRDLKLDNVLIAGDGHVRLTDFGMCKEGIAYGERTTTFCGTPNYIAPEVIRDPDYGHAVDYWALGVLLFEMVVGRSPFDARAEDELFEAILSRDVAPPKHLTPECAAAVKGLLTRDPAVRLGCHVRTGLQDLREHPFFATVDWALLEAKGVQPPFIPSLGCPSDTACFDAEFTGETLDFTPDEPGVLGEIDQSEFNGFSCLNPKVASVA* # ORIGINAL: g11647.t1 original gene structure, not modified by PASA NODE_152_length_34540_cov_65.7591 AUGUSTUS gene 14987 16213 . - . ID=g11647;Name=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS mRNA 14987 16213 . - . ID=g11647.t1;Parent=g11647;Name=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 15932 16213 . - . ID=g11647.t1.exon1;Parent=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 15932 16213 . - 0 ID=cds.g11647.t1;Parent=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 15471 15827 . - . ID=g11647.t1.exon2;Parent=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 15471 15827 . - 0 ID=cds.g11647.t1;Parent=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 14987 15370 . - . ID=g11647.t1.exon3;Parent=g11647.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 14987 15370 . - 0 ID=cds.g11647.t1;Parent=g11647.t1 #PROT g11647.t1 g11647 MQLDRGTLRMGKKDKKRAPAADEPAENNAKRRRTDDDVKAEDASVDRDVRDVVEKKDKKENKDKKKDKKKKHRKQANEHTHELEADGSEAAVDEDAKEFVAESDDAGVFGQLRQVAALLSVDALFDSTRGKKDISGSAVEGNGASWAVDAGLVAELSLAGRAALARDVAPTGMRILSLAKLAAGRLSAFDDDASAGTQKRKSRRDGAWTLTARDVETNPALPLPRQYVEMGLWRLLAKVSGTAVRNAAECCEAAQRGGSETTAADAAAEMQRVGKKTFRDLYVAMATDAFGDDLDALRKDADFDQGKVGLLIDCLRTGIDTWGAVEQGLWLMHLGVNERR* # ORIGINAL: g11642.t1 original gene structure, not modified by PASA NODE_152_length_34540_cov_65.7591 AUGUSTUS gene 204 1345 . + . ID=g11642;Name=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS mRNA 204 1345 . + . ID=g11642.t1;Parent=g11642;Name=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 204 366 . + . ID=g11642.t1.exon1;Parent=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 204 366 . + 1 ID=cds.g11642.t1;Parent=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 666 809 . + . ID=g11642.t1.exon2;Parent=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 666 809 . + 0 ID=cds.g11642.t1;Parent=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 1181 1345 . + . ID=g11642.t1.exon3;Parent=g11642.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 1181 1345 . + 0 ID=cds.g11642.t1;Parent=g11642.t1 #PROT g11642.t1 g11642 HTVLWQVVAGKGWEIAAYVVTPILYFLIKRKIATEVISNGSDESKLLLTKNAVEAARSADRKMTFIPAVFIIVRIWGTARFFLGTVLGRDELADLFWLAFLQGVGDSSQGFFNFVLFCLLTKKIRTRFVSAICYCRRKSGADMADSPKKGISMESA* # PASA_UPDATE: g11645.t1, single gene model update, valid-1, status:[pasa:asmbl_1875,status:12], valid-1 NODE_152_length_34540_cov_65.7591 . gene 10389 11387 . - . ID=g11645;Name=g11645.t1 NODE_152_length_34540_cov_65.7591 . mRNA 10389 11387 . - . ID=g11645.t1;Parent=g11645;Name=g11645.t1 NODE_152_length_34540_cov_65.7591 . five_prime_UTR 11384 11387 . - . ID=g11645.t1.utr5p1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . exon 11241 11387 . - . ID=g11645.t1.exon1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . CDS 11241 11383 . - 0 ID=cds.g11645.t1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . exon 11036 11120 . - . ID=g11645.t1.exon2;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . CDS 11036 11120 . - 1 ID=cds.g11645.t1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . exon 10639 10889 . - . ID=g11645.t1.exon3;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . CDS 10639 10889 . - 0 ID=cds.g11645.t1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . exon 10389 10514 . - . ID=g11645.t1.exon4;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . CDS 10436 10514 . - 1 ID=cds.g11645.t1;Parent=g11645.t1 NODE_152_length_34540_cov_65.7591 . three_prime_UTR 10389 10435 . - . ID=g11645.t1.utr3p1;Parent=g11645.t1 #PROT g11645.t1 g11645 MVGFEAAEAALPTMATGRDAEDNSSARIDYSRDRFPYCVVWTPLPLISWLLPFIGHVGIATSAGVIHDFAGPYTISVDRMAFGRPTKYWQLEAAKGGGAQNWDGGVKRGCADYSRRMHNLFLDNCHSHVAACLNGMGYDNTHWNAWKIGIYLILFGRYIGFRGFLRTNLPFLIIAAIAATVFLYA* # ORIGINAL: g11648.t1 original gene structure, not modified by PASA NODE_152_length_34540_cov_65.7591 AUGUSTUS gene 16641 21250 . + . ID=g11648;Name=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS mRNA 16641 21250 . + . ID=g11648.t1;Parent=g11648;Name=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 16641 16761 . + . ID=g11648.t1.exon1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 16641 16761 . + 0 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 16990 17036 . + . ID=g11648.t1.exon2;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 16990 17036 . + 2 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 17253 17480 . + . ID=g11648.t1.exon3;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 17253 17480 . + 0 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 17602 17783 . + . ID=g11648.t1.exon4;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 17602 17783 . + 0 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 17968 18135 . + . ID=g11648.t1.exon5;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 17968 18135 . + 1 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 18252 18279 . + . ID=g11648.t1.exon6;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 18252 18279 . + 1 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 18408 18773 . + . ID=g11648.t1.exon7;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 18408 18773 . + 0 ID=cds.g11648.t1;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS exon 18902 21250 . + . ID=g11648.t1.exon8;Parent=g11648.t1 NODE_152_length_34540_cov_65.7591 AUGUSTUS CDS 18902 21250 . + 0 ID=cds.g11648.t1;Parent=g11648.t1 #PROT g11648.t1 g11648 MAATIVVRRAEPLREVCSALGGYEADEKGARRYLKGQECLECLYDIHNALKRDNPQKRGILRQLGHWRILQTDLIPLLVTYASEPTICFAAAKVICTMTMPLTLQFPNGGERDEANASEVCEVTEFLRQYKKALATPSVIAAFMALLAPALEKDAAERTEKDAKLLELVLTQFRNMLLMPDPASDSQHGNLAVAFREANVLDLLLVLASGVREDEGRQWSMLLLEMTHLLLHRYDPRALAEAFHAPAESASRRAAAAKALKEAAVAEAQEKRRRIDAAPRSRHSRFGGTFVLSSEAQSCGERVLHRAPGAIAAATQDEGKTARAKRTPRAAADPLAKVRARDEVAADPTSDGRHEVMVALGEYAAQFIDSCYNPIMQVMREEIDSNLRTVGTDETNYLWAMGFFMHLNRRLARDKSEAARRVSLVAQSLELSTAQRLVRTLTTARDAGKEDKSDARRGHIARMLAAVPAYREQLEYVLLMMDSADESLKAYADNLESNLFYDYAALAVVPNMLKDFDPHMHGQAFLASLVNTAHLLIKLLERYCANRSRVFVQRKRKVRKQRKKKMPAAKAGVDSDDSAPQQAADDQRAGDVAEEGEGEGEGEDEDEEDEDEDEGRAITVVVENELDLNAFVRSFAAPAVVRSCMHLMERFVENDAATNHATVRILHRIAVGCGLDNLFHTLGIFRVLCNILNNEKARSNPKLQDVRTFAKFIFSQFLKHAQEDPSAFLFLALGRARQSGSSGSGGSKGAGRSHGDPKKGGRKSRAEWDAEEETLLLKRFAQHREAGAEDPVALLMEELARPRRQIRAKLMELHAVDSAKELRPKRARKARGLGEQSAGASGDHDNGDGAGLLRQQSRRGMRRATKTQWTAEQDDRLRELVDDYDGLDETPYLISKDIEGKSPEEVEARIVELGLLREHHADEGEVIDVEARRREMLAKLLEEDGKNSKNKAAAGAAHEDVSDDSDDSDDSDSSDDSDSSNDSSDDSSARGDESGNARKRATIARSNPSKRISADSPNEALAHSAELTFPDSMEWTSAAGRASSVTEARRDGPPPNSSSAAGDGEDEFVRAARERRAAMRLEKASSEPAAAARRIKRKAVESDDETADDGQHREHNEEKDSAAHTNSSQDAPAVGKTATQTSRPRKRARQLLSEDEGSDSER* # ORIGINAL: g11380.t1 original gene structure, not modified by PASA NODE_1111_length_13879_cov_42.1288 AUGUSTUS gene 2111 5152 . - . ID=g11380;Name=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS mRNA 2111 5152 . - . ID=g11380.t1;Parent=g11380;Name=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS exon 4171 5152 . - . ID=g11380.t1.exon1;Parent=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS CDS 4171 5152 . - 0 ID=cds.g11380.t1;Parent=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS exon 2945 3945 . - . ID=g11380.t1.exon2;Parent=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS CDS 2945 3945 . - 2 ID=cds.g11380.t1;Parent=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS exon 2111 2632 . - . ID=g11380.t1.exon3;Parent=g11380.t1 NODE_1111_length_13879_cov_42.1288 AUGUSTUS CDS 2111 2632 . - 0 ID=cds.g11380.t1;Parent=g11380.t1 #PROT g11380.t1 g11380 MGIRELLLWAAALVCCILMRSADALLNGPCPPSIFNYTWLPSQSRNMNDVLSSACNGEASFLGTRGRIYCDSVLDSAPVAFDFVVSSGAPLTAGGAFIQGILRATQVQDGVPSALTFAIGNTTRPLTALLETSTDSGNLRNGDTVVRHLYRPDTTTNDPVYVAVVCAAASVLGGVASVPSGNYLHPGFALENAHLSIVGTAGARINCVSMPLRSASQSYAHFQLSQSNVTVESLLFVNCSHGIASVMGLKSSFLSLVGVDATFGTLVSASAITILTTSPSLVSVDRGFYVAISTSWNEDGVALVSNGGFASVRGGTHFLSINNSTMKGFSSLSAGGAIYMNGNAMATITQSTFTGCVSESGGCIALGENATLTADNCTFSDSSAFFIGRVPLSSTTAVACGGAIAAKDSAAVHVVRSLVLHCHSEFAGGGILAADKASIHLEDSQVTWCTSRIGGAVSIQSAHSQMSSFVRSTFAQNTASYGGILYLGKESRLTSTNCVFTSSAALIIGGAARADETEMWVSTGDIFAKLSAVYGGAVSIAHAADVSTTTARSTGLVSFANATFEECIGGLDGAAIYAVATAGPLTIMPSMTPADVYDTMLSIFAQASSGGLPVVVSVNGSVFRNNHASRGGAIAFSGLMQPTVTDCHFVDNSAFTGGSISAEGLLWLVITNASFHRSTSSLGGAITLSDNVRARIISSKFVDCLAKSNGGAVLATITSRVELIDIKAVNNSALEAGGFLSLWHNATGTLDRSDFVRHSAGEGGGLIFGGYDTMLTFSNSVVLNACAGNAGGTFRLIGNGRLVADNVTVDRSYSITGALMLLRNSASALFRNVG* # PASA_UPDATE: g11381.t1, single gene model update, valid-1, status:[pasa:asmbl_429,status:12], valid-1 NODE_1111_length_13879_cov_42.1288 . gene 6752 8256 . - . ID=g11381;Name=g11381.t1 NODE_1111_length_13879_cov_42.1288 . mRNA 6752 8256 . - . ID=g11381.t1;Parent=g11381;Name=g11381.t1 NODE_1111_length_13879_cov_42.1288 . exon 8100 8256 . - . ID=g11381.t1.exon1;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . CDS 8100 8256 . - 0 ID=cds.g11381.t1;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . exon 7860 7990 . - . ID=g11381.t1.exon2;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . CDS 7860 7990 . - 2 ID=cds.g11381.t1;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . exon 6752 7732 . - . ID=g11381.t1.exon3;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . CDS 7034 7732 . - 0 ID=cds.g11381.t1;Parent=g11381.t1 NODE_1111_length_13879_cov_42.1288 . three_prime_UTR 6752 7033 . - . ID=g11381.t1.utr3p1;Parent=g11381.t1 #PROT g11381.t1 g11381 MKIDVERPSLFVTGDKMMSSPHATARIGSFFSERIAKYKDPQRHKNGMPKEKSTQPKKTRIPGQQIFLDEYIMGDMLGQGAFGYVRAVTRKSDGAKLAVKAILKDRIRNWVEDVDYGYVPREVHSLRRLSGHANILQFVALYETSEFVLLVTERPHGCIDLFEYVEKSTAMTEAEACKIFKQVANAVAYCHTMGVAHRDVKDENCLINPDTLELKLIDFGSSTNFAPGAHVDFKGTMEWAAPEQVSDKAHCAEAAEVWTLGMLLYVIIFAENPFEDMDPELRAKPLKDFPFKVTDELTHLLRWMLSHDAAHRPTVQQVLDHPWMNYDD* # PASA_UPDATE: g11382.t1, single gene model update, valid-1, status:[pasa:asmbl_427,status:3], valid-1 # PASA_UPDATE: g11382.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_426,status:12], valid-1 NODE_1111_length_13879_cov_42.1288 . gene 10135 12285 . - . ID=g11382;Name=g11382.t1 NODE_1111_length_13879_cov_42.1288 . mRNA 10135 12285 . - . ID=g11382.t1;Parent=g11382;Name=g11382.t1 NODE_1111_length_13879_cov_42.1288 . five_prime_UTR 12073 12285 . - . ID=g11382.t1.utr5p1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . exon 11648 12285 . - . ID=g11382.t1.exon1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . CDS 11648 12072 . - 0 ID=cds.g11382.t1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . exon 11171 11536 . - . ID=g11382.t1.exon2;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . CDS 11171 11536 . - 1 ID=cds.g11382.t1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . exon 10135 10634 . - . ID=g11382.t1.exon3;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . CDS 10193 10634 . - 1 ID=cds.g11382.t1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . three_prime_UTR 10135 10192 . - . ID=g11382.t1.utr3p1;Parent=g11382.t1 NODE_1111_length_13879_cov_42.1288 . mRNA 10135 12285 . - . ID=g11382.t1.1.5b6be70a;Parent=g11382;Name=g11382.t1 NODE_1111_length_13879_cov_42.1288 . five_prime_UTR 12207 12285 . - . ID=g11382.t1.1.5b6be70a.utr5p1;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . exon 12138 12285 . - . ID=g11382.t1.1.5b6be70a.exon1;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . CDS 12138 12206 . - 0 ID=cds.g11382.t1.1.5b6be70a;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . exon 11648 11910 . - . ID=g11382.t1.1.5b6be70a.exon2;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . CDS 11648 11910 . - 0 ID=cds.g11382.t1.1.5b6be70a;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . exon 11171 11536 . - . ID=g11382.t1.1.5b6be70a.exon3;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . CDS 11171 11536 . - 1 ID=cds.g11382.t1.1.5b6be70a;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . exon 10135 10634 . - . ID=g11382.t1.1.5b6be70a.exon4;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . CDS 10193 10634 . - 1 ID=cds.g11382.t1.1.5b6be70a;Parent=g11382.t1.1.5b6be70a NODE_1111_length_13879_cov_42.1288 . three_prime_UTR 10135 10192 . - . ID=g11382.t1.1.5b6be70a.utr3p1;Parent=g11382.t1.1.5b6be70a #PROT g11382.t1 g11382 MRHCRVCMCCFRSSFCFSPSPSFFHRLLNTIICFSIPINQFTARNSQYHLRQHQLVAGGARVRVLARNDPSNGARDESGAVEFVRGSVLNKADVVKAAEGVDGIFHLAGAVYHTVLPAFVAEMQDINVRGTLNVIEAAAVSKARLVYASTSGVVGCSVERDFIAEDTSPYCYDAVKGMPYYETKIAAESVGYKLAASLGVDIVAMRPTLILGPGDERLSSIRLVRDFMAKKVPFVPAGGLSLVDVRDTATAFVLAMEKGRAGSSYLLCSHNCSLSEFFDGLEKITGVSKPPFSVPAVVARYGAWALDSINRMVGAYDAGVDPVLAEMGNRYWNCDCSSSSAARTELGWTSRGWEDTVRDTVDYIKANEETIEKIERETAKKAGGASSKVIAGTVAAASALVAVVVSYTRR* #PROT g11382.t1.1.5b6be70a g11382 MTQKKTYLVTGGTGFLGTELVKQLVAGGARVRVLARNDPSNGARDESGAVEFVRGSVLNKADVVKAAEGVDGIFHLAGAVYHTVLPAFVAEMQDINVRGTLNVIEAAAVSKARLVYASTSGVVGCSVERDFIAEDTSPYCYDAVKGMPYYETKIAAESVGYKLAASLGVDIVAMRPTLILGPGDERLSSIRLVRDFMAKKVPFVPAGGLSLVDVRDTATAFVLAMEKGRAGSSYLLCSHNCSLSEFFDGLEKITGVSKPPFSVPAVVARYGAWALDSINRMVGAYDAGVDPVLAEMGNRYWNCDCSSSSAARTELGWTSRGWEDTVRDTVDYIKANEETIEKIERETAKKAGGASSKVIAGTVAAASALVAVVVSYTRR* # PASA_UPDATE: g11379.t1, single gene model update, valid-1, status:[pasa:asmbl_428,status:12], valid-1 NODE_1111_length_13879_cov_42.1288 . gene 40 1697 . - . ID=g11379;Name=g11379.t1 NODE_1111_length_13879_cov_42.1288 . mRNA 40 1697 . - . ID=g11379.t1;Parent=g11379;Name=g11379.t1 NODE_1111_length_13879_cov_42.1288 . exon 1554 1697 . - . ID=g11379.t1.exon1;Parent=g11379.t1 NODE_1111_length_13879_cov_42.1288 . CDS 1554 1697 . - 0 ID=cds.g11379.t1;Parent=g11379.t1 NODE_1111_length_13879_cov_42.1288 . exon 40 1221 . - . ID=g11379.t1.exon2;Parent=g11379.t1 NODE_1111_length_13879_cov_42.1288 . CDS 40 1221 . - 0 ID=cds.g11379.t1;Parent=g11379.t1;3_prime_partial=true #PROT g11379.t1 g11379 MAATHGGSFAIELDSTLEVINTTFVRSISRSGGGGVLHASGRSRAFFQDCNVMNSTAIFGAFAAVDSLSGFGNLDACDLMMSYTGNLDSVILFTDVLIPSVHITGVRARNLRAERGAFVDALGGDVFIGGDTIVEDSQAVTQAGGVHYSMLSSPDYGHSPTSFRIQNTTFRRCSASVGGAVYLDQAVTKSLYAVNMTLSNVTMVGCEAVAGAGIYINGNDPAAMPSLTTVSFASNSAQFGPNRASAAHYLLLYPDFPEGTRVFPGTSMVRSNVTVYDMYSQIAYIPLGESSLFVQLLDATTYATIPASQARLIGGESKNFENGTVFFENMQIRGSVPGYYLLLLVAPVISKNMTKLVYLTDCTGRQVEQDKLTGEIICPSALEAIATSGGLSSTELSAAIVLPTVACIVGAVMAFFIGLRQRQKKASRETHEKFVQENIAHR # ORIGINAL: g1701.t1 original gene structure, not modified by PASA NODE_4412_length_1657_cov_35.804 AUGUSTUS gene 78 1321 . - . ID=g1701;Name=g1701.t1 NODE_4412_length_1657_cov_35.804 AUGUSTUS mRNA 78 1321 . - . ID=g1701.t1;Parent=g1701;Name=g1701.t1 NODE_4412_length_1657_cov_35.804 AUGUSTUS exon 448 1321 . - . ID=g1701.t1.exon1;Parent=g1701.t1 NODE_4412_length_1657_cov_35.804 AUGUSTUS CDS 448 1321 . - 0 ID=cds.g1701.t1;Parent=g1701.t1 NODE_4412_length_1657_cov_35.804 AUGUSTUS exon 78 298 . - . ID=g1701.t1.exon2;Parent=g1701.t1 NODE_4412_length_1657_cov_35.804 AUGUSTUS CDS 78 298 . - 2 ID=cds.g1701.t1;Parent=g1701.t1 #PROT g1701.t1 g1701 MQAARVALAHCLVRQGVRFFLADTRLLSFMADARNDGGDAAMASISLERLYLGRHIALDVGVFEDDLGPSPARKLEAVVDGCVPETGAAVSVRGLSFTSGEHAPYVFNVKGAPVTVDGRDAEKIHPLAIRIRIAPPRGDTVDITIRVFHTRRNFAWFSSTRVAGSGRRGLRVSPGAMGRLSVPLFVLIPGVLPAPPAAKALGAGTWSVPDDPAAFVSATRNGALTECDFEQAVRHDRQYGSGAAGVDAEGAVRARGQAALFTSIAADLLAITADALSAANVTFWINSGTLLGWRRECGVIPHTRDVDIGVFISEYSEAMIHELTSRGLQLKHSLGLPEWGFELSFTFRGTKLDIFFFYIETDHAW # PASA_UPDATE: g12781.t1, single gene model update, valid-1, status:[pasa:asmbl_6178,status:12], valid-1 NODE_3534_length_3251_cov_38.7541 . gene 490 3232 . + . ID=g12781;Name=g12781.t1 NODE_3534_length_3251_cov_38.7541 . mRNA 490 3232 . + . ID=g12781.t1;Parent=g12781;Name=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 490 666 . + . ID=g12781.t1.exon1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 490 666 . + 0 ID=cds.g12781.t1;Parent=g12781.t1;5_prime_partial=true NODE_3534_length_3251_cov_38.7541 . exon 817 1197 . + . ID=g12781.t1.exon2;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 817 1197 . + 0 ID=cds.g12781.t1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 1472 1602 . + . ID=g12781.t1.exon3;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 1472 1602 . + 0 ID=cds.g12781.t1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 1844 2062 . + . ID=g12781.t1.exon4;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 1844 2062 . + 1 ID=cds.g12781.t1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 2292 2634 . + . ID=g12781.t1.exon5;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 2292 2634 . + 1 ID=cds.g12781.t1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 2923 3102 . + . ID=g12781.t1.exon6;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 2923 3102 . + 0 ID=cds.g12781.t1;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . exon 3224 3232 . + . ID=g12781.t1.exon7;Parent=g12781.t1 NODE_3534_length_3251_cov_38.7541 . CDS 3224 3232 . + 0 ID=cds.g12781.t1;Parent=g12781.t1 #PROT g12781.t1 g12781 VGENFKTEGYVVTDKTMELLRRHVEIVKGKVHTRFPPEPNGILHIGHAKAMYLNFMYAKVNGGNCYFRYDDTNPAKEEERFFVGIRQMVDWLGHKPYKVTHTSDYFQELYDLAVRLTMDGHAYICHQSEAEVKENIPSPFRERPVGESLKLLEDMRKGKIDEGKATLRMKHTMEDGKLDPVAYRIKFHPHFKTGDEWCIYPTYDYSHCLIDSIENITHSLCTKEFQNRRMSYYWLCNTLGVYCPVQWEYGRLSINYTVLSKRKIQKLIEIGKVSDWDDPRLHTLMGLRRRGFPADAINNFCEKIGVTMAQVNVDPSLLESCVRDYLNVSASRAMAVLEPLRVVITDIPADKTVSVTVPNIPGDDAKGSHEIKVGRVIFIERGDFKEAPEKGYRRLAPNQIVGLKHAGLVLTLQKINKDASGNVTELEVTSAPLSADNKPKAFVHWVAEPSKHNRAAVAEIRLINTLFLHKNPEDKDQRL* # PASA_UPDATE: g13409.t1, single gene model update, valid-1, status:[pasa:asmbl_4462,status:12],[pasa:asmbl_4463,status:12], valid-1 NODE_2507_length_6047_cov_39.851 . gene 1298 5959 . - . ID=g13409;Name=g13409.t1 NODE_2507_length_6047_cov_39.851 . mRNA 1298 5959 . - . ID=g13409.t1;Parent=g13409;Name=g13409.t1 NODE_2507_length_6047_cov_39.851 . five_prime_UTR 5878 5959 . - . ID=g13409.t1.utr5p1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 5776 5959 . - . ID=g13409.t1.exon1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 5776 5877 . - 0 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 5477 5611 . - . ID=g13409.t1.exon2;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 5477 5611 . - 0 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 5050 5211 . - . ID=g13409.t1.exon3;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 5050 5211 . - 0 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 4216 4867 . - . ID=g13409.t1.exon4;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 4216 4867 . - 0 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 3751 3917 . - . ID=g13409.t1.exon5;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 3751 3917 . - 2 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . exon 1298 3534 . - . ID=g13409.t1.exon6;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . CDS 1513 3534 . - 0 ID=cds.g13409.t1;Parent=g13409.t1 NODE_2507_length_6047_cov_39.851 . three_prime_UTR 1298 1512 . - . ID=g13409.t1.utr3p1;Parent=g13409.t1 #PROT g13409.t1 g13409 MAPCFAESLNSLKFAYRAKSVKNYAVVNKDHRQEAMLSAYVSELDRLRMELASIKVDMTREQEEKEKVARDWEQVQQEKNAIVTELQQSSRVLVDMLDEKSRLETRIKALENKLLTGGTRIQETREFQEALVREQERMRREYEAKFTFLEAERQRIEREKDFLRIQLERLRANSESGAQNGSGNAPLSPVSPRSRPLEPVQQHQQQQQHHHHHNSNHQESQQAHHERATVEKAEPVQMQHTQSNCATPTQERASSVSAAKVMSTTSESTPPQVDVARSLRRTVSESSESSADEERDVRRQSTGSAAEERYNAQSLSPEWVTFVDALKDPITGIPLSDRRGVFGVFKAAFSGRDAFEYFTRHVAGVTSDDQVMLLGQAMIKMGVIDHYKGSKTFSTSPFDFYQFRGMLDARPTSAQKRSTTAYYGSTSTSLGSSFNGSAATDARSHMMQKQQAMMQQHNNTMSTFYQPQQQQQQQQQQQQQQQQHQMQTQVQQQQQQMYAQGQAQRSTYYGGSFSGNGNGGGGGSFEQTPGSPATGGRPLPVELTGGDSSRDPMPNELHMAANQGDRNAIKTLVVSHGIDSRDANNRTPLMYAVMGDRTKCAEMLLRLGASANARDSNQRTAVVWAAYFGHTDCVKLLLKYGADANAADGEGRTALQWSTKHDSTRCLDAVLKTLRRQELNRPDNEGHTALHWSVTYGHPEATRLLLRSGADAVAADSHGRTALHFAVSARSIKCVRVITEIDEDAVASRDHRGRTPLHLACGEGAADCVQHMLSLRTIDPNVTDLRMATPLHWAAVCDKPDIAQVLLSRGARWWMKDVNGLTPLDYASKKNHAGCVAILQRAQASMPMTADDQRKQQDLAKQSEELRRQQPGGGSARPTSAGPGASFFGNSFHGAANTGNNNINNTNNTNSGNSGNMGMSSSNNNGVAGNGGAMYAGGSTSFHGALASGSMGTTGNYPMSPMSPASAVDGTQQQPMTQGVGSPNTLRGDLGSGSLPRLNGGDPFARASVGMASVSPMSPGLSSSGMPPQGMRPVGAGFNPAMQVPLSSVPGTRVQPRRTGWGGPSPNGGGMTPVGGLEA* # ORIGINAL: g13408.t1 original gene structure, not modified by PASA NODE_2507_length_6047_cov_39.851 AUGUSTUS gene 52 325 . + . ID=g13408;Name=g13408.t1 NODE_2507_length_6047_cov_39.851 AUGUSTUS mRNA 52 325 . + . ID=g13408.t1;Parent=g13408;Name=g13408.t1 NODE_2507_length_6047_cov_39.851 AUGUSTUS exon 52 325 . + . ID=g13408.t1.exon1;Parent=g13408.t1 NODE_2507_length_6047_cov_39.851 AUGUSTUS CDS 52 325 . + 1 ID=cds.g13408.t1;Parent=g13408.t1 #PROT g13408.t1 g13408 IHLCLTYPHTNPGVAESFIKDVRQAAGVILSRPREKSHGSAAMYGMAQSVPDRSVINEMAFAFIDAMYNARGPLIADEIRKEKSPNGTKH* # ORIGINAL: g9400.t1 original gene structure, not modified by PASA NODE_3818_length_2687_cov_37.4433 AUGUSTUS gene 97 2534 . - . ID=g9400;Name=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS mRNA 97 2534 . - . ID=g9400.t1;Parent=g9400;Name=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS exon 1278 2534 . - . ID=g9400.t1.exon1;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS CDS 1278 2534 . - 0 ID=cds.g9400.t1;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS exon 999 1191 . - . ID=g9400.t1.exon2;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS CDS 999 1191 . - 0 ID=cds.g9400.t1;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS exon 507 631 . - . ID=g9400.t1.exon3;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS CDS 507 631 . - 2 ID=cds.g9400.t1;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS exon 97 301 . - . ID=g9400.t1.exon4;Parent=g9400.t1 NODE_3818_length_2687_cov_37.4433 AUGUSTUS CDS 97 301 . - 0 ID=cds.g9400.t1;Parent=g9400.t1 #PROT g9400.t1 g9400 ARADGGGDDRHSAVTEGHLQTVGTIASALLRSNEELAASRDECARLKAALTSVVDSPSLCGGHGEAAEYGGGAASVAERDGLRSAQHAVLELSASAGVLGRVWIEESRAFSAVIGDTATALGAAMRKVSVAAQKRAAVLEAEVLRIRQLYWEERTRRRRLHDELVDMSGRIRVHCRVRPLLSHVTFQGGSGRYSVANEESEKENASHTHTNTHATVAELRSAFGLETGAAVACVDGETVAVITPERSSITPRTPSRRIRPSVFAKKSVSNDSDNEKSFTDAHSDDGDDSDGAGRAEDDVDASWGSRVTPAHVQADHVPAATPKEERDDRRAFHFDHVHGPSATQCDIFSEAEALLTSALDGRNALVVAYGQTGSGKSHTMFGPAVSGGIRGNDVGLVQRASFRLFESIAADCVCFYSTKYAWGWVICVEIYNNALRDLLDGDASVSASSAVDVSVGSNGAVALVGASEHPVTCADDVLVCVQAAMGRRAAGSTNVHSHSSRSHCIVTIHIESRPFDAASERKAAKSKLQFVDLAGSECVGHSGAQKGTSQFAEASHINRSLSALSDVLAALSQGGSHVPYRNSKLTFALQDAL # ORIGINAL: g8813.t1 original gene structure, not modified by PASA NODE_5171_length_982_cov_31.9593 AUGUSTUS gene 193 808 . - . ID=g8813;Name=g8813.t1 NODE_5171_length_982_cov_31.9593 AUGUSTUS mRNA 193 808 . - . ID=g8813.t1;Parent=g8813;Name=g8813.t1 NODE_5171_length_982_cov_31.9593 AUGUSTUS exon 704 808 . - . ID=g8813.t1.exon1;Parent=g8813.t1 NODE_5171_length_982_cov_31.9593 AUGUSTUS CDS 704 808 . - 0 ID=cds.g8813.t1;Parent=g8813.t1 NODE_5171_length_982_cov_31.9593 AUGUSTUS exon 193 429 . - . ID=g8813.t1.exon2;Parent=g8813.t1 NODE_5171_length_982_cov_31.9593 AUGUSTUS CDS 193 429 . - 0 ID=cds.g8813.t1;Parent=g8813.t1 #PROT g8813.t1 g8813 MIRKARIEQMPSRDQNDVDAIPTACRLHGSLPINKVAGNFHITAGKAIQHPFGHVHNPLAVPSNAYNFSHRIDHFSFGIEFPGMVNPLDADEKIATEGKSSLLFSLQLAGAGV* # PASA_UPDATE: g1153.t1, single gene model update, valid-1, status:[pasa:asmbl_7927,status:3], valid-1 NODE_51_length_49422_cov_45.1719 . gene 5811 7139 . - . ID=g1153;Name=g1153.t1 NODE_51_length_49422_cov_45.1719 . mRNA 5811 7139 . - . ID=g1153.t1;Parent=g1153;Name=g1153.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 7110 7139 . - . ID=g1153.t1.utr5p1;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 6934 6974 . - . ID=g1153.t1.utr5p2;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . exon 7110 7139 . - . ID=g1153.t1.exon1;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . exon 6870 6974 . - . ID=g1153.t1.exon2;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . CDS 6870 6933 . - 0 ID=cds.g1153.t1;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . exon 5811 6673 . - . ID=g1153.t1.exon3;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . CDS 6054 6673 . - 2 ID=cds.g1153.t1;Parent=g1153.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 5811 6053 . - . ID=g1153.t1.utr3p1;Parent=g1153.t1 #PROT g1153.t1 g1153 MSLFGGAFQSLGNVARAAYETGTSIITRRWATVKAGGSSKNGRSSAGRRLGVKRFEGEAVTPGTIIMRQRGFKFHPGRNVDSGRDHTLFATCAGIVRFDSEEYNDGPARKKRSRIHVIAHKEVDRLVFCQTTRPLDDVVAVASPIAKAPLGSPVDQFTAAFASAQAKIVGPVVTDLVMMAAPKVHVVVDPKKGGKGQAAKPAKPDAATIAAMVAAKASKKSQPRPNA* # PASA_UPDATE: g1156.t1, single gene model update, valid-1, status:[pasa:asmbl_7923,status:12], valid-1 NODE_51_length_49422_cov_45.1719 . gene 14834 17961 . - . ID=g1156;Name=g1156.t1 NODE_51_length_49422_cov_45.1719 . mRNA 14834 17961 . - . ID=g1156.t1;Parent=g1156;Name=g1156.t1 NODE_51_length_49422_cov_45.1719 . exon 17905 17961 . - . ID=g1156.t1.exon1;Parent=g1156.t1 NODE_51_length_49422_cov_45.1719 . CDS 17905 17961 . - 0 ID=cds.g1156.t1;Parent=g1156.t1 NODE_51_length_49422_cov_45.1719 . exon 14834 17740 . - . ID=g1156.t1.exon2;Parent=g1156.t1 NODE_51_length_49422_cov_45.1719 . CDS 15170 17740 . - 0 ID=cds.g1156.t1;Parent=g1156.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 14834 15169 . - . ID=g1156.t1.utr3p1;Parent=g1156.t1 #PROT g1156.t1 g1156 MASVSAASPVRFPPVDMIKDADLGAPSRRPLSSRHAAGADMAMSAPADMAMSPLGHNGRNAHPAEHGLPVHQNMVFAPTAPYADEELQTLRDEVDVLRSHADGILHENERLHEELRRHAEIIAEARASGLAPGQGGYHPSNAPVSVEEWEELQERLEIAQQENDALLEQQHRADGEIARLRESHRSAVREAFERGTEAATARDEGSLWRRQSDEQASQLRAMEEDRERLEQELRQRRMDADALEEELRRCRMEVQQSASAQSAVKQKLLAANSEVQSQARALEEKDRRLRASEDQMRTFEQSIMEARSETDGLRRTSSEAQKERDALRDALAAAKRSIDLAQQREMGMYNHVQECMDLIEESNLERDQALLREQQATKELARLADRMRMSLKEAEDRSRAEIDAARQIAATECKKLRDELARAEESDAAARAQVERALRDKRTAEHELERVMKEQPTELARMDGLVENLNRRLRAAEAERDKMVTELEALRSTAQQQLQHTENERARLAGQLEDTTRRLRTTERLIEDARVERLEALRQVEEMRKVVAEANAAREDAESRFTARVEALARRHEAAIRDAEVRINEVASRGDAEAAELREMVTQSQQAAAGWREQARSGRAVVSELQRELDRALRELDDMKGQIEATNEARLRLKGEVDEQARLLRRADVAVAEASAQAEAAAHWAEAQVARMDAQHREEKRQIRRDLRIARVERDRIARERDTISARVLRLPAGDPTDLFLADYPEDYPADAHLSSLRGVRADNAAAGGEFEDLFLASHAGAKNDTRLSSSRPPRRHRTERETIVHSPEERSALRVESRGTGYAGEDDPSSEAGSGEPVRGGGEVSAAVLHASAHRGTRRQEESDDEDDDSASER* # ORIGINAL: g1161.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 31141 33439 . + . ID=g1161;Name=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 31141 33439 . + . ID=g1161.t1;Parent=g1161;Name=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 31141 31210 . + . ID=g1161.t1.exon1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 31141 31210 . + 0 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 31350 31394 . + . ID=g1161.t1.exon2;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 31350 31394 . + 2 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 31497 31609 . + . ID=g1161.t1.exon3;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 31497 31609 . + 2 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 31740 32136 . + . ID=g1161.t1.exon4;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 31740 32136 . + 0 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 32329 32444 . + . ID=g1161.t1.exon5;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 32329 32444 . + 2 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 32810 33001 . + . ID=g1161.t1.exon6;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 32810 33001 . + 0 ID=cds.g1161.t1;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 33332 33439 . + . ID=g1161.t1.exon7;Parent=g1161.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 33332 33439 . + 0 ID=cds.g1161.t1;Parent=g1161.t1 #PROT g1161.t1 g1161 MEIHPWQVQIAGMLFIMGLMRFLESRAAMRGCHRQAMSPLVDRCLRLVFLVFMVGPFCFFVDSKLVGYPLATGLAVLYAFTYADLSEQHGGRPSSAVRKWSIWAFARRYFGIKLVKTVDLDPKKTYIFGVHPHGILPFGVAVALCSDFPGGWSDLFPGVEFRTLAATFCFYLPVYRDLLLAGGVVDAARYSANKILKMGLNLALVPGGATEALYSDPAKDVVYIKKRKGFVKLALEHGASLVPIFSFNENNTYSQMAITHKTVYYLKTKFQRIFGISLPLITNIIPKRTQVTAVVGRPIPCPKIENPSNEQVEAYLQKYIDGIVELYEANKDKYNIPKTKPPLVVM* # ORIGINAL: g1152.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 269 5441 . + . ID=g1152;Name=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 269 5441 . + . ID=g1152.t1;Parent=g1152;Name=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 269 3384 . + . ID=g1152.t1.exon1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 269 3384 . + 0 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 3584 3702 . + . ID=g1152.t1.exon2;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 3584 3702 . + 1 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 3863 3934 . + . ID=g1152.t1.exon3;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 3863 3934 . + 2 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 4065 4219 . + . ID=g1152.t1.exon4;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 4065 4219 . + 2 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 4468 4603 . + . ID=g1152.t1.exon5;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 4468 4603 . + 0 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 4913 5154 . + . ID=g1152.t1.exon6;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 4913 5154 . + 2 ID=cds.g1152.t1;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 5349 5441 . + . ID=g1152.t1.exon7;Parent=g1152.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 5349 5441 . + 0 ID=cds.g1152.t1;Parent=g1152.t1 #PROT g1152.t1 g1152 VGLGAGALSGIRYELEEIESRYERYPETLAFIELIDALTRHGLPSGLNYQPYLSFLRDAVFLRFDSRAYALPKERWLVASGVLGVFLRILWSYEPSADPAFSDASSVNLDPSQINQQRASPGHEIMASLLSGGGFLRKLLSVIDHASEALAAELQLATREVATREQFRAFEDATLACLRLLVAALGKQDSFLSLQRTRHATVMATSLERLLLGVNPRTGEADHMLQIALLVSHHSRPSLCLAACRIVAHLSRSADAQPRLARILAGAPEASAIVAGFIERLDIDEAESDGDLVVASSAEEGAVAADANSSATASVIRKTIVRTMLDSVAHPYPNVGLFLLGFQPENPTSTPATNQFQRELARAAAQFGGAASARLTLGNVGTSSGCFRVILELLFRGIGRFRPPSIATDAPHLAEMCYHLVYALCSDTRTSSATMRFLRNNEDYFFRQMLGLPARLPAADPERGDAGLRAHLLNQRAWVLKAAALELRIMHATGQRSHALRLLHVMFGTPVPTHLLSEGASAVDGVFSNFEQQGPEQPRMRMLELLDGIDLDYNEPVRPQTSHIDGSVVESCEFIDSRGVPVVDIGRLHALLIDVRENAAATMGHNDRNTAEHQASMLLEYAAARNEARADLQARHHSLESWVQVVKVALVGALDALPPPSRQPVVVALAQELLPRAASDAPPVVAQLVTECLASVVYRLRFELMQTAAVVGGGSSGVAASPAIPFEQLRIVVQGTVEALLRAGTTQPIRGNLHATLLNALSLVSSSFSGQRGGVTDAAGNISAPSAALTQAALASYGGRLVESVSRDACDGADLWRMVALGTLDVLMAGDAGGSVLGAINKRGYIRHIAEDPIRDDARLQATLLPGPESLNVLFVYESEMALLLRIAENPAGAGALVESGVLRRLCDCNFVAQRPDDAPFEAGTFIPPSLERYHQLLLPLLRLLVGVVEATGGRHVGAISQAAYFVSQHSDLVASILRDRVPTLTPTVTEELWLTVAVLRHATSGGESASGAQIGSARMSRLRGLSLTLLQRYCTRERWVSRAHEVNPDLEKSVRRLIANLVGYLRVEVDGEADSADGNSASGSPRILFTPSLAAAKGDALETAGSRVAPSLSTLAVLLRSCAFGFQLATDKHRTALYQTEHFAELSPSQLRDIASAARGGDAQPTSLSDDVIELSSVARSHLAATMAEAEAEVADLIYTIETCLYVLWRHLDVFLSKASASTSASPFSSGFSGDASLQSAQRGSTASFTLSAQESEALRLDGNAYLSEALGRLYDTKLSQLEMRKGSGLEFMHAMVRRIRGMLALRSA* # ORIGINAL: g1158.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 25354 26793 . - . ID=g1158;Name=g1158.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 25354 26793 . - . ID=g1158.t1;Parent=g1158;Name=g1158.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 25354 26793 . - . ID=g1158.t1.exon1;Parent=g1158.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 25354 26793 . - 0 ID=cds.g1158.t1;Parent=g1158.t1 #PROT g1158.t1 g1158 MKCSDGLACHGWAFTATALYAAAMIALGFAPNVNTRVRLLHLSFAAVSAVLCIALSLPLLGINSRYLSNVGHAGVVSQFVAHGIFCIVAAVVSNVVSMGDERNGGRAGSPRQSTLFPAVHHLARGILFLAHMRFGELDGAAANTDSILPVLIAYDLAIGAHLIVFGCRAAPVYAAAHAFDALLYAGVASRLRPRPEDRLVKTRYGSVRVRIYGNEAWSPSKATVVLIPDGPAVAENCEDAAIAVMAAFACPVVSMDMPGFGMSRPSPLYNHSFEAGADAIDDVLQSLGIRRALLNCSCVNGFYALALASRPNTKVAGLVLAQTPDIASMEAWAVWTIPTPVKIPFVGQLVTFFTRKKLGAKWFRIAIPKATPNRDTVLASWTAHADAVSARGGCNCLAGVVQGSMSSTTDSLYKVPGSIPVSCVWGASDITHRRTNPKSIVNIVPHATVRVVEPPVVAGHAPTLEIPQLLVDALAPMLA* # PASA_UPDATE: g1165.t1, single gene model update, valid-1, status:[pasa:asmbl_7931,status:12], valid-1 NODE_51_length_49422_cov_45.1719 . gene 45072 49285 . - . ID=g1165;Name=g1165.t1 NODE_51_length_49422_cov_45.1719 . mRNA 45072 49285 . - . ID=g1165.t1;Parent=g1165;Name=g1165.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 49238 49285 . - . ID=g1165.t1.utr5p1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 49238 49285 . - . ID=g1165.t1.exon1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 49023 49121 . - . ID=g1165.t1.exon2;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 49023 49121 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 48693 48770 . - . ID=g1165.t1.exon3;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 48693 48770 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 48316 48403 . - . ID=g1165.t1.exon4;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 48316 48403 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 47893 48080 . - . ID=g1165.t1.exon5;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 47893 48080 . - 2 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 47476 47652 . - . ID=g1165.t1.exon6;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 47476 47652 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 47042 47186 . - . ID=g1165.t1.exon7;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 47042 47186 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 46605 46799 . - . ID=g1165.t1.exon8;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 46605 46799 . - 2 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 46251 46414 . - . ID=g1165.t1.exon9;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 46251 46414 . - 2 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 45736 45869 . - . ID=g1165.t1.exon10;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 45736 45869 . - 0 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . exon 45072 45446 . - . ID=g1165.t1.exon11;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . CDS 45338 45446 . - 1 ID=cds.g1165.t1;Parent=g1165.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 45072 45337 . - . ID=g1165.t1.utr3p1;Parent=g1165.t1 #PROT g1165.t1 g1165 MLGVKLQEEYIRKVQAAPFFQRSELDRISNETEKILAERMGFKDPSNDAKKLGEYSKRKNKHDHKWSMFMAGLYVGACLPMVIMLIVTASEADGFSTWKPQYTMYRGLILPICFCYLFGANVYLWIRNNINYVFIFEFDATNYLTHAQIFEMAGLMSLLWVVCVYLTVHHTTIVPAEYMPVTLFLVYILYFINPLRIFHRSARYWVIYHILRVFSAPFTKVRFADFWLADQFNSMAIMFIDMEFLFCQTLVIATNGSSDPFRCKGWPVGVRPVLSALPAWLRFLQCIRRFVDTRNAFPHLANAAKYSTTFFVVLFSTLDDANQPSPGGTEWTIYRKLWVCSSIIATCFTYWWDIKMDWGLLQKTGPRFLRRELLFPRMFYYVCMVGDLLMRMLWTLTVSPQIIGVSLPSDILRTCLAFAELFRRFVWNILRVENEYLSDCGQFRQEFKLPRALPYSAN* # PASA_UPDATE: g1162.t1, single gene model update, valid-1, status:[pasa:asmbl_7924,status:12],[pasa:asmbl_7925,status:12],[pasa:asmbl_7928,status:12], valid-1 NODE_51_length_49422_cov_45.1719 . gene 33869 39591 . - . ID=g1162;Name=g1162.t1 NODE_51_length_49422_cov_45.1719 . mRNA 33869 39591 . - . ID=g1162.t1;Parent=g1162;Name=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 39481 39591 . - . ID=g1162.t1.exon1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 39481 39591 . - 0 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 39044 39326 . - . ID=g1162.t1.exon2;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 39044 39326 . - 0 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 38876 38910 . - . ID=g1162.t1.exon3;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 38876 38910 . - 2 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 38615 38698 . - . ID=g1162.t1.exon4;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 38615 38698 . - 0 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 38031 38364 . - . ID=g1162.t1.exon5;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 38031 38364 . - 0 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 37811 37905 . - . ID=g1162.t1.exon6;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 37811 37905 . - 2 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 37456 37573 . - . ID=g1162.t1.exon7;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 37456 37573 . - 0 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 36816 37295 . - . ID=g1162.t1.exon8;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 36816 37295 . - 2 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 35288 36701 . - . ID=g1162.t1.exon9;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 35288 36701 . - 2 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . exon 33869 34921 . - . ID=g1162.t1.exon10;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . CDS 34711 34921 . - 1 ID=cds.g1162.t1;Parent=g1162.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 33869 34710 . - . ID=g1162.t1.utr3p1;Parent=g1162.t1 #PROT g1162.t1 g1162 MGDVGGLGEFGGGRTTSSSRAFPTMSQPTAKAPAHGQLAALLKDRRDVESFSRIAGADIGRSSSAPPQVAPELPADILATLSPDDPRLDPGYSAFYYSRRPLDPRLPPPLLPPGQAYYQWSLFSQQGHDAESFSQFSHLVEKKSSKNVAPSVIGEPPSSPKPRNLVEMIQEDFPRTPSPVYVIKQHQLQQQQGADGPMASQPADSASASLRRSQGDGSALSSGLLSSSSVTSEFPLRRQASVPSIPISSQSHTHPQSQPQPLSHSRSAVSMPNYVAQESAYQDATLPSPSLDSQSYRSDFPLEAAIGMLSLDSPHGSLQEQQQYLAQFALENGLDPQRLRNQMYAGTSQPMGVAGFGMVHPAMTGIDVSGGMKGVKGGMSMGSHQAGSLSSAALLGTTPPMTLSMAAAAGLLPAEWLDSLDDAGMEQAAATAAMYGSPPQHGAEYLRRNLMHASAAMFQGGANPMMLSNLPPQTQLAFVQMQQQAHMQQQQQQQQQQQQQQQQQFQQQQQQQQQQQQQQQQHHQHQQHARNGVANGLGLGVGSVPMNIGNVGMMGAINPLAYGGLPQAHAQAVAANQQQHQHQQQQMHSHQHSQHSQHQHHQMQRNVAQGSYGGVHPGAIPREQQQQQQQQQQQQQQHASLLPSPLVGGGASSMQPAALAPIGPVSPVGVVPQSPLGPSTPSSPSVTASGPAGANNNSNNNNSNQPRSKLLEDFRNGRLPSLQLGDIVGHVVEFSGDQHGSRFIQQRLEQSTAPERQAVFDEILPASLSLMTDVFGNYVVQKFFEHGTPTQRQCLASKVEGHVVTLSLQMYGCRVIQKAIESVPAEDQLRIVAELSGHVLRCVRDQNGNHVVQKCIERVSPERLQFIVDSFVGQVYPLSTHPYGCRVIQRILEHCPERQTAPLLAEMHRSTSNLVMDQYGNYVIQHVLEHGRPVDRSRIVQGLRGKIQPLSQHKFASNVVEKCICHSSPQDRAIMIQEIIMQSETPNAAANALHSMIKDQYANYVVQKMIDLADDQQRAGLVARIKPHIHSLRKYTYGKHIIAKVEKFIATGSI* # ORIGINAL: g1159.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 27183 28379 . + . ID=g1159;Name=g1159.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 27183 28379 . + . ID=g1159.t1;Parent=g1159;Name=g1159.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 27183 27323 . + . ID=g1159.t1.exon1;Parent=g1159.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 27183 27323 . + 0 ID=cds.g1159.t1;Parent=g1159.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 27621 28379 . + . ID=g1159.t1.exon2;Parent=g1159.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 27621 28379 . + 0 ID=cds.g1159.t1;Parent=g1159.t1 #PROT g1159.t1 g1159 MAEAAAAITLLTDFGYRDAYVGVLKGVIYAVSPHTRVIDLTHGIPPQDIAAASFNLATSVEYFPANTVHVVVVDPGVGTHRRAVAVRTQECGTIICPDNGVLTGVLCAFGVVDAYELTETSYWRPRMSPGLPSTTFHGRDIFAPVAAHLASGNVDIAHLGQSIDPDTLVTLPLTAPALVQDSGGDYHIEGSVQYIDTYGNVITNIPTTHVCFLAWESGLPERTWVTLTAESEDTDMSLLHVTVRDHVAPYSRTYGEGGIGSLFWLIGSHGYVELAIGSGSASAVTGASVGTPVVCTLAD* # PASA_UPDATE: g1157.t1, single gene model update, valid-1, status:[pasa:asmbl_7922,status:12], valid-1 NODE_51_length_49422_cov_45.1719 . gene 18960 25116 . + . ID=g1157;Name=g1157.t1 NODE_51_length_49422_cov_45.1719 . mRNA 18960 25116 . + . ID=g1157.t1;Parent=g1157;Name=g1157.t1 NODE_51_length_49422_cov_45.1719 . exon 18960 22842 . + . ID=g1157.t1.exon1;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . CDS 18960 22842 . + 0 ID=cds.g1157.t1;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . exon 23145 24116 . + . ID=g1157.t1.exon2;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . CDS 23145 24116 . + 2 ID=cds.g1157.t1;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . exon 24337 25116 . + . ID=g1157.t1.exon3;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . CDS 24337 24926 . + 2 ID=cds.g1157.t1;Parent=g1157.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 24927 25116 . + . ID=g1157.t1.utr3p1;Parent=g1157.t1 #PROT g1157.t1 g1157 MFDRDGLWECHQPYLRVSASPSNEFATAKDGSNNVAADANDKIVCVTAVLPRLCFVNLISLRPDFLLDDDDGGRSNNASCPPSPLSSTPSPGVRTISPVIERVEFCKTEADGVFVEVPEVTSSESHIRHFFRTGYPSRLTVAARGLARCVRVTVRMGTLSSASASRPPSILELCFDVEPAGILSACFECYPVDECPPPVAQMRLMNAVTCVASRADVYERASSLALCGLAMARSRRFVQGAEMIEAAARTIEERETVTGPAFGANFAGERSWDEHFVAPLDDDYAVPYRVGIDGYSVQTEVSAAAILHILAADVHLQASNSARFIRSVRTACESIHSLPRPPSRDPVSDAGTCLAPVADAFLAVARRCLGDTAIVVRGAILRIIVSASESLGSNIGRLFPLLVRDVAFSYSHHLCTHHVPLADAIAGRSRATSTSSVGSNPMLASQKETMQAITDALSHSSTGGGGLNVQLSSAYESALECFHSLSTRYGGFVLAGRLDGGAARTRRTSGRASDCEGMGRDDIDNRLDIRSSLFEALSPTTSSEFHPSALVHLLRMDAEMAARSGAWCADTAYLTILLQLHDAAASRGDSESVLATTRTWREFVRQPCPPRAAGSLMRWASAVLSRWPCVPWGSARDAEIADSPALRRMSTRSHVVYHCNCGESNGASLPHGCLVLVLDLVRAVGSTYGHLCVPPCAGGGGVCAVSERGKRALESTRAGLCAVLFAIELCARAHLRLMASDPRKVALDMFGKLWSCVRLDPQLSSALLAEMLDAACVMTDAGRSLPLHAAHSLRVGVDSFLPSRDGKPVIPGFVEGASTSLATACEKGCGVGSVGGGETCPSFRQLLTSMMSFVTRASDWLPGCTHDDAPALVAALVRCLLASGRLSDAACFAALEAMFHKHAVRTIAHRAALEDLAKAFALQSSYASSSRASSRSTDAGDKGINSPCSQESGVHTLVLILRHCVIDSTLPPAIYDGGAFERDPPRVEREHDLFVDRLTFASDCLVETDHLAPVADRDDGLRVLHTVASLLVEVVERHPQSRVRELALRTAMLCVLKCVRPTTATQATSASVCGSHSPSQCTHAPLPSNPVEHLLTKLSPPDATYSDEGEEPSCESYSMADIFVATIRSALTHRVHGDLQRRCLVTLSGVFEAGGHLSLAHVPFEFWAWMVAAIVPLIGLVACNDWAEVRNPALSLLVSLSSDLCEGTHLRPPRLHLAAGAVSAFCAPTGPGAGAPSVLSSLLHGESLQSRVAGVRIAGNLLGAERHVRRHFAGHPFADPAHWMAIVEDLIDIEECDPVLAETVAPLIDVAQSLFPSPDAPPPVTPTPDVPDVPDIASGPEGAAATISMEAFSLPLSDDTWALIVACNMSSLRTAEAGSSARDSFAVSPSARLAAMKGRLTQPGGGGGMGGSGGGLGPAHSQALHTRDAQRSRRQAPRSPIGTSSADRILEDEEDSEGGERDRRGDVHGRGNVACKGSSDYDDGIDGEDGEPEVDLLSGSAPPVLEDHRGLAQHGQSRSKGAGIREDAALDFGNEFSLEDADADADADAGMDVGAAGERGARVDKLLSGGGLTAFSANSANNGKQNRPATAAKGSQRKGEKKASEKRKVGLSDSDSDEDEDVEYLYIAGQLDVLEERLGDGTNSPSGASGTARTHAPMTRADVIEGSSNGGSGTAGSSKRPQRPQSASASRAGRAPTGAVAAWAVAGVAGDLGEGAPLSPSSPGSMRRGSGRGVPFTRGGAVSPDVRESRDGGMSKPSANGFFDAYAMFEDETVGDDDDDIAGNVTLSDAQISLALDDFRDEFGANGVDDTTDA* # ORIGINAL: g1154.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 7818 9574 . + . ID=g1154;Name=g1154.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 7818 9574 . + . ID=g1154.t1;Parent=g1154;Name=g1154.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 7818 8861 . + . ID=g1154.t1.exon1;Parent=g1154.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 7818 8861 . + 0 ID=cds.g1154.t1;Parent=g1154.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 9125 9574 . + . ID=g1154.t1.exon2;Parent=g1154.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 9125 9574 . + 0 ID=cds.g1154.t1;Parent=g1154.t1 #PROT g1154.t1 g1154 MSSGAANTNNDETVLNPRKRAREEDAGEGAHDSLLDPHEQAIENHHKQLVDNIGTLYLRNGELSDVTFHVGTPPKRRRFNCHRLILALQSPVFKAMLYGDFMESNQSEITLDDVCPDTFAQIHQYIYTGQINLEINNALALIMLADRYGLTTLTSECVKIVRASLTHENVFRIMDQYSAVEDLRRGCIAYIGDHAATLLTSDTVLELSEDMLGEVLRWDYLVVDEIELFNLIVRWGEHQIRTLTGEPSSTPAEEVVRRTRSSRGASQASANGSASGVTKEAGNGNGKEKEKEKDEMDKVTLKSVVANLVKLIRLPMISPQQLWEIVAKSGVVEEHDCLVAIAFHSVPQVIGAGSPVVRRRCSRAITYLSQTPKSAHVRFVLERYTNEAEKHCVYSPPFDVGGHKWRLYVGSNTQCKKKFAVYVDLAHPELKQEPEASFSLHLCKFANPKERVTKTADRHKFTEDERDWGFTNFINVSDLKKYIQDNALMIEAEITVE* # ORIGINAL: g1164.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 42117 44823 . + . ID=g1164;Name=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 42117 44823 . + . ID=g1164.t1;Parent=g1164;Name=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 42117 42226 . + . ID=g1164.t1.exon1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 42117 42226 . + 0 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 42601 42697 . + . ID=g1164.t1.exon2;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 42601 42697 . + 1 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 42855 42990 . + . ID=g1164.t1.exon3;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 42855 42990 . + 0 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 43129 43212 . + . ID=g1164.t1.exon4;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 43129 43212 . + 2 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 43440 43528 . + . ID=g1164.t1.exon5;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 43440 43528 . + 2 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 43827 43882 . + . ID=g1164.t1.exon6;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 43827 43882 . + 0 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 44036 44123 . + . ID=g1164.t1.exon7;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 44036 44123 . + 1 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 44285 44371 . + . ID=g1164.t1.exon8;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 44285 44371 . + 0 ID=cds.g1164.t1;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 44680 44823 . + . ID=g1164.t1.exon9;Parent=g1164.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 44680 44823 . + 0 ID=cds.g1164.t1;Parent=g1164.t1 #PROT g1164.t1 g1164 MAQHILHSGYHHEVLRKWQSPNTDLALERLMYPIFVSFGVNHIRDVIGPLVAKGLKSVLVFGVPVNVAKDNNGTCADTDASPVVQAVKILRSEFPALVVACDVCLCAYTNHGHCGVFDESGQLDNEKSIKRLAAVALSYAKAGCHVVAPSDMMDGRIRAIREALFAAGLASRVTVLSYGAKFASAFYGPFRDAAKSAPASGDRRCYQLPVGASGLAMRVVERDINEGADMVMVKPGGPYLDIVRAVKDKVSGEYAMLCHAAAAGSFDLRTAALESLVGMRRAGELLIASYFCVHLM* # ORIGINAL: g1160.t1 original gene structure, not modified by PASA NODE_51_length_49422_cov_45.1719 AUGUSTUS gene 28575 30365 . - . ID=g1160;Name=g1160.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS mRNA 28575 30365 . - . ID=g1160.t1;Parent=g1160;Name=g1160.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS exon 28575 30365 . - . ID=g1160.t1.exon1;Parent=g1160.t1 NODE_51_length_49422_cov_45.1719 AUGUSTUS CDS 28575 30365 . - 0 ID=cds.g1160.t1;Parent=g1160.t1 #PROT g1160.t1 g1160 MAFISSRPAFRRFAASALLVTYAIIITLLLKQPASTCRSETTLLARTTLVSVNEYFDRVFYINRDIDTEKRDIMRALFDKNGIEAERFPAIEATSAAVVEASHKYKVALESTSTTDKMDDGGDRQGAMTPTDFALLATFGSLFETAKKRGYSRILVLGDAVRIHHAFAAEFDRQARALPPNWKILHLGADSEPIRDGEATAGADDDSPVPTQHSRASPQHPRHTVSGAFAVGIDASLFDILSFGVRTSVRPFDTGVLHTVASAYKKHTHVTTPHLFIKDELSNTDSHGFASQSGGSHRHSAPLSMYAPRCDPAPLPKVCTVITLFNAEQTIAYSIRSLLGQTYTNIEVVVVDDASSDTSFSIVQQLAMEDPRVRAVRNTRNVGAYASRNIGIRHCTGVIYMNHDADDVAAPNRVASQIGPILDNRAEVTLALFVRTHATVEELALPWNALARRVTELRVHRKLSGDFFYCCKDKLAMATMMLRRSVFDRIGTFDDSRHSGDAEFLERYLALTMGYFFGSDIGTPMQVHDFLWHTPPLPPYYERIDRIIYVGADLNSSLSHVIPIGGAERLDRRREYQRNIRIMAGTETTANSDDAE* # PASA_UPDATE: g1155.t1, single gene model update, valid-1, status:[pasa:asmbl_7921,status:3], valid-1 NODE_51_length_49422_cov_45.1719 . gene 10145 14307 . + . ID=g1155;Name=g1155.t1 NODE_51_length_49422_cov_45.1719 . mRNA 10145 14307 . + . ID=g1155.t1;Parent=g1155;Name=g1155.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 10145 10319 . + . ID=g1155.t1.utr5p1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 10145 10390 . + . ID=g1155.t1.exon1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 10320 10390 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 10537 10634 . + . ID=g1155.t1.exon2;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 10537 10634 . + 1 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 10999 11225 . + . ID=g1155.t1.exon3;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 10999 11225 . + 2 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 11462 11533 . + . ID=g1155.t1.exon4;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 11462 11533 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 11816 11899 . + . ID=g1155.t1.exon5;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 11816 11899 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 12229 12287 . + . ID=g1155.t1.exon6;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 12229 12287 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 12719 12917 . + . ID=g1155.t1.exon7;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 12719 12917 . + 1 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 13090 13254 . + . ID=g1155.t1.exon8;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 13090 13254 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 13458 13610 . + . ID=g1155.t1.exon9;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 13458 13610 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 13771 13862 . + . ID=g1155.t1.exon10;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 13771 13862 . + 0 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . exon 14069 14307 . + . ID=g1155.t1.exon11;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . CDS 14069 14273 . + 1 ID=cds.g1155.t1;Parent=g1155.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 14274 14307 . + . ID=g1155.t1.utr3p1;Parent=g1155.t1 #PROT g1155.t1 g1155 MASDAQPPAIVTDLTAAYYAADAQASRYARIKARFVELFGVEPSFYARAPGRVNIIGEHIDYSGYGVLPMAIEQDVVIACATNVITANANRNTLIIGNTNGDAFPTRTYAADVATVDNTKHEWSNYVLAGYIGVLEEFKVTAPLGLNLVLDGTVPGGSGLSSSSAIVCCAALAALHANTLSASKASLATLCAKSERYVGTEGGGMDQSISYLADRGAAKYIQFNPIRAETVRLPNGAAFVISNSLVEANKYVTAGTQFNLRVVECRTAAKVLAKLSGGVDFRTVRTLGDLQTKLGRSLRQMVDMTAQLREEAYSRADVTALLGLSDEEFVSECLSPSTKDAQMFNLRKRSRHVYAEAERVLLFKQVCENPSADSLQELGRLMNESQASCSVDYACSCELDQLTSLCRELGALGSRLTGAGWGGCAVSLVAVDRVDDFVKNVSRLYYENDERRARLVKTALFATQPGSGACVITL* # PASA_UPDATE: g1163.t1, single gene model update, valid-1, status:[pasa:asmbl_7930,status:3], valid-1 NODE_51_length_49422_cov_45.1719 . gene 40576 41794 . - . ID=g1163;Name=g1163.t1 NODE_51_length_49422_cov_45.1719 . mRNA 40576 41794 . - . ID=g1163.t1;Parent=g1163;Name=g1163.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 41764 41794 . - . ID=g1163.t1.utr5p1;Parent=g1163.t1 NODE_51_length_49422_cov_45.1719 . five_prime_UTR 41514 41538 . - . ID=g1163.t1.utr5p2;Parent=g1163.t1 NODE_51_length_49422_cov_45.1719 . exon 41764 41794 . - . ID=g1163.t1.exon1;Parent=g1163.t1 NODE_51_length_49422_cov_45.1719 . exon 40576 41538 . - . ID=g1163.t1.exon2;Parent=g1163.t1 NODE_51_length_49422_cov_45.1719 . CDS 40632 41513 . - 0 ID=cds.g1163.t1;Parent=g1163.t1 NODE_51_length_49422_cov_45.1719 . three_prime_UTR 40576 40631 . - . ID=g1163.t1.utr3p1;Parent=g1163.t1 #PROT g1163.t1 g1163 MSLEGSYNLRVAGGTEQGKHLLSCRPDGYVDLYSHDDNSHRQKWIIRQISRDEYNIYVSGGTNPGKVLLSCGTDGHVDLYTHDDGSGRQRWKLVNIGGNAFNIVIAGGTNPGKFFLSCGTDGHVDLYSHDDGSGRQRWLVEFDNVIEGIDYNIFVGGGTDQGKAVLSCRPDGYVDLYSHDDVSGRQRWRVHKVNGNPREFNIFVAGGTNPGKTLLSCGTDGHVDLYSHDDGSGRQRWQPHRVGTTFYFNLHIAGGTDHGKKMLSCRNDGFVDLWERDDASGRQGWMFVAVRRF* # PASA_UPDATE: g11949.t1, single gene model update, valid-1, status:[pasa:asmbl_509,status:12],[pasa:asmbl_511,status:12], valid-1 NODE_1135_length_13650_cov_39.1352 . gene 6000 13532 . - . ID=g11949;Name=g11949.t1 NODE_1135_length_13650_cov_39.1352 . mRNA 6000 13532 . - . ID=g11949.t1;Parent=g11949;Name=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 12780 13532 . - . ID=g11949.t1.exon1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 12780 13532 . - 0 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 12076 12323 . - . ID=g11949.t1.exon2;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 12076 12323 . - 0 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 10786 11760 . - . ID=g11949.t1.exon3;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 10786 11760 . - 1 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 10395 10596 . - . ID=g11949.t1.exon4;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 10395 10596 . - 1 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 9747 10165 . - . ID=g11949.t1.exon5;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 9747 10165 . - 0 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 8932 9559 . - . ID=g11949.t1.exon6;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 8932 9559 . - 1 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 6739 8633 . - . ID=g11949.t1.exon7;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 6739 8633 . - 0 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . exon 6000 6443 . - . ID=g11949.t1.exon8;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . CDS 6272 6443 . - 1 ID=cds.g11949.t1;Parent=g11949.t1 NODE_1135_length_13650_cov_39.1352 . three_prime_UTR 6000 6271 . - . ID=g11949.t1.utr3p1;Parent=g11949.t1 #PROT g11949.t1 g11949 MYTCAQVANRAGYEGPVLWKTPFNVDGALPVRAGTGKTYYVGTNGSSSNPGTVEKPFRNPGDIVGSLNPGDTLIIRAGNYNGPIQLYKPSITIKGYPGEIARIIASSTDPNVANCVYFGGDAADMHLENLELVGGYFYAVMFNSAGGGNSDPRYNRMRAENGLPTLQSTIRNCRLFSSGTSVIKISPQADDIVVENCEIFNSGRRTTAQTVKPASEDNNAVGKALVEDDTLSVNEALTAPANPDFVINTKGSGNGIDVRGGSRLTVRDSYFHDIAGTAILLGGGAKGCIIERNLFRNIQGVGVLIGSYNTEAMYMDAERPPEEGLYDNVDALVINNVITYCTGAGIAFYSALRATVAHNTLHQVANSWHAAVLFNISPKEDSINHDLLLRNSNITFVNNIVAQSKGSLVPTLEIRTQQASYQEYLPSAVAASTADDCIAKANQKPADPYPGAVGKNADESCPMFPPTHPMNTDISSLPVHPLSDTYIKAIGVSGSCNCIPGTANLGGSCPKRNRPNCGFIHPDFGGSNPTPNGNALAGIPFVKVNSTTPRVPMSFVLYDNESDQGPYPMPIDAPIEGTPPGCPIEVCSGDRHVIALDTDACVVYEVWKGVPVPKSNTAPDGAWTAANGAVFNLTNNNYRPLGWTSADAAGLSILAGLVRYDEVAAGEVKHAIRMTVEYSQKGYVLPATHYAGISADRTLPPMGLRLRLKGSHNCSNYKFQAKVICEALKKYGAIVADNGSPWYLTGEANAQWDTTQLADLTLIPGSDFEAVDTGATLCTNPECDPGITLPAKRVVGALDAYTTLKSEGNVYFHYAPRYRTIPLDFVDRTPESFFRGGLGVWQNKTGADRTSIWADPLLDADLMPASNSPAIGLGASYPFVKTDYYGRPRNASQATSDAGAIPRGPTFAFAATERRRIFSQTTTSTACTISRPAGVPLYVSASTGNDKNCPGNATAPLKTLAAALDRAADGDTIVILNGGDVAGGVVVYVPNVVITANDTTYRPRIVQTFVFDNNDAIEIQAANVTLKGIEVQGGSSHSVSVYASGVVINNCKLHGAGREVLYLNGATDAQIVDSEVYNSGQRYSRFGDGIRIVGSHNIDILRTFVRNIRSTAIHVTHGSSLVTVRACQVRDATRGIYFGYDGIGESLMDPETYDPIDTIACDWTSLSARCFHATDCTAESNVVFNTDGAGIAFAASKNSVAVQNTLYSVGNHADGGVVARAAQFWVSPADQPIVTNEGLVFKNNIVVMGALSAKPAFAAISVRSFDDSVTLAGIEAAGKSDINQNIYHKIPENGAQGAAAFDPLFFQGVSKSAFKASGFGSPLASVAYFSVGGAVTTSTSWIALGYDTVSVFSDPGLNVTTLRPLSASSKAVAAFPMLAQSSSDFDGNARSATTDAGAYVFGASQKRPVSTSAPAVSQPGSCLTPPATSPAVNCRPPACVLPGWHTGQAAIDIEKRAVSECLWGGGVYPSNHAWRRDITLDPVHPMSDSYVWSMGASGALHPDFGSVYDGQPNGMPYVYVNSSIAGVPMQKGSFLYGDESDAGPYPWFEDYPIEAGGCNSLGDRHIIAVDTATCKVYEIFHSDPINPAYRASAGVAFAGASGAVFDLKTGADRPLGWTSADAAGLSVFAGLVTYYDVVVRKQIDHAIRFTAARTQKAFFNPPATHFASGDTNPILPPMGTRMRLRSSFDCAGLATSESRVICKALQKYGMILADNGSDWFITGATHPQWDDSALDPLRTIHGSMFDAVLSPGVRLCTVSDCSA* # ORIGINAL: g11947.t1 original gene structure, not modified by PASA NODE_1135_length_13650_cov_39.1352 AUGUSTUS gene 2197 3201 . - . ID=g11947;Name=g11947.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS mRNA 2197 3201 . - . ID=g11947.t1;Parent=g11947;Name=g11947.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS exon 2197 3201 . - . ID=g11947.t1.exon1;Parent=g11947.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS CDS 2197 3201 . - 0 ID=cds.g11947.t1;Parent=g11947.t1 #PROT g11947.t1 g11947 MDVRVIDRSDVWSHPKTGTLALITSRLQYDSEFRHNVQCSLDNTEPIMPGKCIDFSVPFHSANAKNGDASCLTTARLQTSELSVTFSNEDVVACVHRMSRDPSIGSLLVHSFANPEFAGGPRPYCGRSQEEALCRVSTLPLAINLGIDVGLHRQWEEGLYPLRIVARVDERPNSIRNISCMEHVGIYTPGVQFLRGGEQEGFAALSDGLVSTAAVATVAAMDMTLLSNRQLLGDDGRYGDIALRVMTEIVAGMLDHAVLRGHEALLLGAFGCQAFENPPIDVARLFRRLLCDEMRYRGMFKRVQFAIPSEKVRCVFEEAFVGGVSGTIPVSAWK* # ORIGINAL: g11946.t1 original gene structure, not modified by PASA NODE_1135_length_13650_cov_39.1352 AUGUSTUS gene 193 1350 . - . ID=g11946;Name=g11946.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS mRNA 193 1350 . - . ID=g11946.t1;Parent=g11946;Name=g11946.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS exon 1168 1350 . - . ID=g11946.t1.exon1;Parent=g11946.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS CDS 1168 1350 . - 0 ID=cds.g11946.t1;Parent=g11946.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS exon 193 792 . - . ID=g11946.t1.exon2;Parent=g11946.t1 NODE_1135_length_13650_cov_39.1352 AUGUSTUS CDS 193 792 . - 0 ID=cds.g11946.t1;Parent=g11946.t1 #PROT g11946.t1 g11946 MSQPRPPPPLPGNKPRLNAEDATAVSSVTPVVPPRPTLPFPSPKASSYAGPTQSNSSASSEVRRTVGPAAPLPKRPSGPSPSDAPPQQSQQSQGGPFPAYVFKPRALSNNRSTVAGPSSTPPSGTTASPPGLATSADVSALKKADNGQDSRRFGSFDPTRLQRFDRAVSNPPLPTHLHTSNSAASQGPPPPLPKKPISMSSSIPGPAGGSGAGAEGAVSASEGDRQGKPSPRVRPPMPKSVVGTWVVVRTLILASPCGVC* # PASA_UPDATE: g11948.t1, single gene model update, valid-1, status:[pasa:asmbl_510,status:12], valid-1 NODE_1135_length_13650_cov_39.1352 . gene 3525 5932 . + . ID=g11948;Name=g11948.t1 NODE_1135_length_13650_cov_39.1352 . mRNA 3525 5932 . + . ID=g11948.t1;Parent=g11948;Name=g11948.t1 NODE_1135_length_13650_cov_39.1352 . exon 3525 3561 . + . ID=g11948.t1.exon1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . CDS 3525 3561 . + 0 ID=cds.g11948.t1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . exon 3682 3764 . + . ID=g11948.t1.exon2;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . CDS 3682 3764 . + 2 ID=cds.g11948.t1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . exon 4040 4166 . + . ID=g11948.t1.exon3;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . CDS 4040 4166 . + 0 ID=cds.g11948.t1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . exon 4391 4446 . + . ID=g11948.t1.exon4;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . CDS 4391 4446 . + 2 ID=cds.g11948.t1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . exon 5620 5932 . + . ID=g11948.t1.exon5;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . CDS 5620 5793 . + 0 ID=cds.g11948.t1;Parent=g11948.t1 NODE_1135_length_13650_cov_39.1352 . three_prime_UTR 5794 5932 . + . ID=g11948.t1.utr3p1;Parent=g11948.t1 #PROT g11948.t1 g11948 MAALGSTDAIVREVGLLYAELFDQSAQLDRQIKLFVKEFETKRGDGDILRLSQTATAVRAALDTLTQSETMLRSVSGTIQTEVQSALHQCKGGIDNEAHAQHVRTQRKEKDVARREDVYRAFVAECDEKMAAMDDAARSEKRKLKRHYAKLGVVVNDH* # ORIGINAL: g6347.t1 original gene structure, not modified by PASA NODE_2885_length_4844_cov_62.0201 AUGUSTUS gene 1609 3511 . + . ID=g6347;Name=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS mRNA 1609 3511 . + . ID=g6347.t1;Parent=g6347;Name=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 1609 1711 . + . ID=g6347.t1.exon1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 1609 1711 . + 0 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 1883 1993 . + . ID=g6347.t1.exon2;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 1883 1993 . + 2 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 2100 2269 . + . ID=g6347.t1.exon3;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 2100 2269 . + 2 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 2520 2666 . + . ID=g6347.t1.exon4;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 2520 2666 . + 0 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 2805 2853 . + . ID=g6347.t1.exon5;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 2805 2853 . + 0 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 2994 3240 . + . ID=g6347.t1.exon6;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 2994 3240 . + 2 ID=cds.g6347.t1;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 3367 3511 . + . ID=g6347.t1.exon7;Parent=g6347.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 3367 3511 . + 1 ID=cds.g6347.t1;Parent=g6347.t1 #PROT g6347.t1 g6347 MCVDACVSVGWAHRCLTETHRERFHKHGFLVLDDVVPQHALDALRGECDAVIRRVAGGDGARLISQTGGVVEPLGLVVDRKAVPAVCTDRDVFMQRRRTLGEHVCCLLIHSPLPRMAADLLDADALFLYNEQYVVKPADSGSQSQFKWHQDCEYVDDGPLREIDTVGCWIALDDVTEENGTLEILSLPKEPEGADGERATSEERPAKRMRRSEQHRSVSVDHRKRAQLYPTADTLNAALDAGDDGDDCNAPHTGATCVIASAGSIVLLSPWVMHRRRLKRTAVLDCSGPNISDTARRVFLPQYSAAAVGGASPVALAVPIVLD* # ORIGINAL: g6346.t1 original gene structure, not modified by PASA NODE_2885_length_4844_cov_62.0201 AUGUSTUS gene 223 1018 . - . ID=g6346;Name=g6346.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS mRNA 223 1018 . - . ID=g6346.t1;Parent=g6346;Name=g6346.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 639 1018 . - . ID=g6346.t1.exon1;Parent=g6346.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 639 1018 . - 0 ID=cds.g6346.t1;Parent=g6346.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS exon 223 357 . - . ID=g6346.t1.exon2;Parent=g6346.t1 NODE_2885_length_4844_cov_62.0201 AUGUSTUS CDS 223 357 . - 1 ID=cds.g6346.t1;Parent=g6346.t1 #PROT g6346.t1 g6346 MDILNITADFSLWSTTEQDALDGAVLATSCLSVVGCVLILLSYVCFPDLRTRSRSLLVYLSIADFVTAVGNAMGALSSNGRTTNTPLCVFQSVLTTYSSISSFFWTVAIAVFLYMTIVLNSSSLAERSVVWFHVVSWGVPAVVVTVAGSLDVLGYDGMSTTVGWCWIRADT # PASA_UPDATE: g7883.t1, single gene model update, valid-1, status:[pasa:asmbl_3313,status:3], valid-1 NODE_202_length_31941_cov_41.536 . gene 25954 30028 . - . ID=g7883;Name=g7883.t1 NODE_202_length_31941_cov_41.536 . mRNA 25954 30028 . - . ID=g7883.t1;Parent=g7883;Name=g7883.t1 NODE_202_length_31941_cov_41.536 . five_prime_UTR 29848 30028 . - . ID=g7883.t1.utr5p1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . exon 29601 30028 . - . ID=g7883.t1.exon1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . CDS 29601 29847 . - 0 ID=cds.g7883.t1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . exon 29389 29487 . - . ID=g7883.t1.exon2;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . CDS 29389 29487 . - 2 ID=cds.g7883.t1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . exon 28317 29246 . - . ID=g7883.t1.exon3;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . CDS 28317 29246 . - 2 ID=cds.g7883.t1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . exon 25954 28158 . - . ID=g7883.t1.exon4;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . CDS 26174 28158 . - 2 ID=cds.g7883.t1;Parent=g7883.t1 NODE_202_length_31941_cov_41.536 . three_prime_UTR 25954 26173 . - . ID=g7883.t1.utr3p1;Parent=g7883.t1 #PROT g7883.t1 g7883 MSSVASSSDYGDHAQHGGHGHGHDEHHHHQHHHKHQQHKQHHDTMSIGGDSVDSFGMPLHKIAAAQSARLPKRAQRRAQTSIGMRKSATVAHAVASSSQDHGRIAWLAALNGKTPEEFLEATRNASKKPVANFMEAFLEMGGTWGGPPKKGQGASGTPRHSNNSINTAGASSGGGGGTARSTTQSVGSRPLDSHEAAVFNSTYRDPDRMYQELQDNRKEIAALKSEREGMRTRTRKLEQEVGKRDKQIDMLQRTATEGPISGAVPGAPVTAITATDSQGKIRQLERAVRERDMAIDRLRNDIKYTRHAELEAELETCYAEIERLKKVAGAASAGMADASGRVIDVIDGVIDTRDFESLHGQLANYKDLYTRQKREVREVRHELERALDDVYRLKQRLVDVTGGDADHPLSDERELRERQLERRVEELTRAHEAMANRVDQLQTREVTLITERDKYRILLSRVQHEAALNAAEDQHRGRSRKRKTGVNSAAVPDASSDESDFEGAVKRRSMSRSPSPHRLSPSLSRQQQRKRDVLYGPDGHGDSDSVVAPEHDERERSRSRDMGLSMAAGATLDAAAGGVKVAKARTSHRGETGIDVARPPSKSPKRSAGMGVAAAGLREEPNSSDESGDDRKKRGRSKSPKHMDGKKDSPKKKKNEKETDGSSSSDEDDHRDDAKRKSRSKSRSKSRSKSPSHKKEKKSSGSSSSSPSDTASDSDVGAIRDIQAALRGHGARSRSQSRSRSASRSRSKSPKRSKSPSKVDDEAVSELQAALRGHYARLAAAKKKGGKSGKKTASMSEDDIVLLQSALRGHANRKEANRRLKKVSHEDSSAGSSEASAAAILHIQSALRGHKARAKAVRARSKSPSRSSKGTGAVNADAEAISIVQAALRAHIARKAVVKKDKQRSRSPSRTRAAVYDDESIELIQAALRGHKARRKHVRGSSPDRSLSKSKKLSTSESSLSASDRETKRGSTLNRSRSPTVSRSRAASPSRDLRNIGDSPYKPADRSRSSSPLSRTMPETMNRGARSTPTRINNNSFSKTLPAKSSGAYATPTKFDLQVRSIGGGGGGDRLNATIGGFSRPRGVMI* # PASA_UPDATE: g7881.t1, single gene model update, valid-1, status:[pasa:asmbl_3312,status:12], valid-1 NODE_202_length_31941_cov_41.536 . gene 21492 23213 . - . ID=g7881;Name=g7881.t1 NODE_202_length_31941_cov_41.536 . mRNA 21492 23213 . - . ID=g7881.t1;Parent=g7881;Name=g7881.t1 NODE_202_length_31941_cov_41.536 . five_prime_UTR 23075 23213 . - . ID=g7881.t1.utr5p1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . exon 22967 23213 . - . ID=g7881.t1.exon1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . CDS 22967 23074 . - 0 ID=cds.g7881.t1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . exon 22641 22772 . - . ID=g7881.t1.exon2;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . CDS 22641 22772 . - 0 ID=cds.g7881.t1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . exon 22125 22508 . - . ID=g7881.t1.exon3;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . CDS 22125 22508 . - 0 ID=cds.g7881.t1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . exon 21815 21975 . - . ID=g7881.t1.exon4;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . CDS 21815 21975 . - 0 ID=cds.g7881.t1;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . exon 21492 21585 . - . ID=g7881.t1.exon5;Parent=g7881.t1 NODE_202_length_31941_cov_41.536 . CDS 21492 21585 . - 1 ID=cds.g7881.t1;Parent=g7881.t1 #PROT g7881.t1 g7881 MRRTMTAILNPLAHQTMLNPSPKRVQHMREFSLDSWHSNTDDTFERTNSNRTSGNASPENVSVEMTDSDAEGDMRLHIARENARTETDRSSTFLLQDGDATADKAFHIEHRHAYNSGQYDGGKPTARNDARLTSSMSAQDADPLVPFSKRHMWEILTIVILYSGYVGKYFVTSHLSVLKTLVQSDLEMTEMTWGSTAGAAYVVYSISKVIFGVLTDRYGGRVMWIFSLWGSSLMTLGFAIAPGPLMFILSWNFLYICLCPGWLAGTASNLAWGAHSSHDCQWSSHIRRRTLR* # PASA_UPDATE: g7877.t1, single gene model update, valid-1, status:[pasa:asmbl_3305,status:3], valid-1 NODE_202_length_31941_cov_41.536 . gene 5456 8480 . + . ID=g7877;Name=g7877.t1 NODE_202_length_31941_cov_41.536 . mRNA 5456 8480 . + . ID=g7877.t1;Parent=g7877;Name=g7877.t1 NODE_202_length_31941_cov_41.536 . five_prime_UTR 5456 5643 . + . ID=g7877.t1.utr5p1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 5456 5700 . + . ID=g7877.t1.exon1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 5644 5700 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 5859 6020 . + . ID=g7877.t1.exon2;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 5859 6020 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 6168 6263 . + . ID=g7877.t1.exon3;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 6168 6263 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 6451 6597 . + . ID=g7877.t1.exon4;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 6451 6597 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 6745 7236 . + . ID=g7877.t1.exon5;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 6745 7236 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 7676 7959 . + . ID=g7877.t1.exon6;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 7676 7959 . + 0 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . exon 8272 8480 . + . ID=g7877.t1.exon7;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . CDS 8272 8449 . + 1 ID=cds.g7877.t1;Parent=g7877.t1 NODE_202_length_31941_cov_41.536 . three_prime_UTR 8450 8480 . + . ID=g7877.t1.utr3p1;Parent=g7877.t1 #PROT g7877.t1 g7877 MDSYGRQQEKEMREPLLRKESAAAVSHVHSTIAVHDLSASVANAPSTAAAAAVPHDQSELSDLEFLQQYVNVQRGALPADTGRDEIFDMTAALQRCQNTVVLPITWLLRLLAWTHLDVSSYPRLSSALNIFYPLAILTLIFYSYAYDIIVCLDGREDGTSVCSNIISKYIVPDIVHFISFAYAMYYFRRLSGFEHLTSLIETVFLRSTENSYQTLYGDLSQSKLVRTLRGYILLGFLWITCRIVYNTLQYVFVAGTDFSTDIKAWMIVLQIGATAVADATYVALVVNYAIQCRLLLFYTDGLRHRLTQRQLTLNATFQEVILIQRWLRNVNRGIGYAIGMSSFMFVTLTVTPIVTILDGDIQSYSDMGKTLVITDLVLWLLILFGTLLQAARVTSKGASLRDSAIIMRNEGYRKASPADLDSFILFVSHANLDAKIVAVPMSPALLAKAVLVFLVTALIMFQIGIVKFWIG* # PASA_UPDATE: g7880.t1, single gene model update, valid-1, status:[pasa:asmbl_3308,status:12], valid-1 NODE_202_length_31941_cov_41.536 . gene 18011 20577 . + . ID=g7880;Name=g7880.t1 NODE_202_length_31941_cov_41.536 . mRNA 18011 20577 . + . ID=g7880.t1;Parent=g7880;Name=g7880.t1 NODE_202_length_31941_cov_41.536 . exon 18011 20577 . + . ID=g7880.t1.exon1;Parent=g7880.t1 NODE_202_length_31941_cov_41.536 . CDS 18011 20356 . + 0 ID=cds.g7880.t1;Parent=g7880.t1 NODE_202_length_31941_cov_41.536 . three_prime_UTR 20357 20577 . + . ID=g7880.t1.utr3p1;Parent=g7880.t1 #PROT g7880.t1 g7880 MAGPNDSASGDVDMDFARDDDALDSNSLFPLSPYGAFGIFSPEILAWIVLRIAEVNTGAVCLLSSTCRSWHELVSQVCAQRLRTLQLSRTRPILSLVPVGVSAPVALSAYAAIWPRTERRRSAMQARVVERQLATHGGVLPQHVAGVLSGLRFVENSVGLCHGVHAVGGGRIAFEIPLDGGSSASALVLSPAHRRRFPAVEFDCEVVTGVGYTTHSVSFGYCLPGDSERRCFGAFEGTEDPFERNGARSGQAHLEPVRCMPVHPVLWDIVADGWPSFSRADFISLLRDCYDAATDDLAVPFIAGAVNTGLRGGADDADDGDDGDDDNGNDDDAASDGVSFVDRAGVGPYECRRALDALNIPVFREFFDVLGAHYGLRLMRRAYAAVTCGGLLNGLQPRLLRSAHEGIERMGCPADAASALETSYGRRHYSRPFAAYFNDHQLRPTGAQPIGSSFGYGPITPDGYERTRPRPYFSRERLDAVRRGVLPSPFMGGANPFSLARRQSPRTRNRRPVWDNDNSGSDDDDNDDGDDGDYGDDGDDGDDGDMNEDLYSNPYPHRGYGDAPSRLSGHRLGSEPSAPVAAHRTSSVACNESCDGVSERARLDRERQSHAEARRKALTLEQRQREEASAAADVAAVAAAAAQQSLTARLHEERLRVAALRASRVSAPQQPTPVDPPVANGILSSLGELRRMQQQQQQQARGALVRRSGTAPAMDTGASSAVAPPSDALPLTALLAAERIGRRDAPIRRSPAPANTGTAQQTRPQPLQFGGAQRLGYMDDQ* # ORIGINAL: g7884.t1 original gene structure, not modified by PASA NODE_202_length_31941_cov_41.536 AUGUSTUS gene 30687 31476 . - . ID=g7884;Name=g7884.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS mRNA 30687 31476 . - . ID=g7884.t1;Parent=g7884;Name=g7884.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 31383 31476 . - . ID=g7884.t1.exon1;Parent=g7884.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 31383 31476 . - 0 ID=cds.g7884.t1;Parent=g7884.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 30687 31222 . - . ID=g7884.t1.exon2;Parent=g7884.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 30687 31222 . - 2 ID=cds.g7884.t1;Parent=g7884.t1 #PROT g7884.t1 g7884 MSSILQTSDYYRKNSDGKLPLRWMAPESISERIYSEKTDVWSYGIVLHELHSFGCTPYSELSNREVLSFVQCGGRLDRPPGCPPATYAIMQMCWASDRDGRPTFNHIVGLLQNNALATSNSAQNGNEVACEGIGAVPVREANLAANFSPYTNVDESSSNQATNTGRRHYNQGEIEMERYANVPVGVHYQSTVLLTSMDEYTTVIGSTEV* # PASA_UPDATE: g7878.t1, single gene model update, valid-1, status:[pasa:asmbl_3311,status:12], valid-1 NODE_202_length_31941_cov_41.536 . gene 8474 13904 . - . ID=g7878;Name=g7878.t1 NODE_202_length_31941_cov_41.536 . mRNA 8474 13904 . - . ID=g7878.t1;Parent=g7878;Name=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 13775 13904 . - . ID=g7878.t1.exon1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 13775 13904 . - 0 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 13578 13657 . - . ID=g7878.t1.exon2;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 13578 13657 . - 2 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 13077 13177 . - . ID=g7878.t1.exon3;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 13077 13177 . - 0 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 12827 12930 . - . ID=g7878.t1.exon4;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 12827 12930 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 12394 12550 . - . ID=g7878.t1.exon5;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 12394 12550 . - 2 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 11595 12194 . - . ID=g7878.t1.exon6;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 11595 12194 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 10403 11366 . - . ID=g7878.t1.exon7;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 10403 11366 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 9924 10126 . - . ID=g7878.t1.exon8;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 9924 10126 . - 0 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 9489 9578 . - . ID=g7878.t1.exon9;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 9489 9578 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 9053 9325 . - . ID=g7878.t1.exon10;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 9053 9325 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . exon 8474 8798 . - . ID=g7878.t1.exon11;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . CDS 8681 8798 . - 1 ID=cds.g7878.t1;Parent=g7878.t1 NODE_202_length_31941_cov_41.536 . three_prime_UTR 8474 8680 . - . ID=g7878.t1.utr3p1;Parent=g7878.t1 #PROT g7878.t1 g7878 MAATVESLPPTDRDEVSVAGQSILVPKMLVAVDRPAVRNTLEDRTYALSRNKCLDTRPSVIHFDGYRAGEDDENLVIPIHAYPVVNKAVFPSRIDFKPCALTDVQTKVIPLRCDVPIDFDYEIAVVEGHSHFVVEPLRGTIPANGEAHIQITHSPTSYTTASIKLQVSVAQFNFEPIFCVVAGSALPGLNRPATPPDREAERIAEARLAKVRMQDPVALLLQDRLRATHANNNSINSTGHANGTARAFSKKADGLGPGGETADGGGDADGSVASATAGAIGDVDASLALPAVTAKALNSQHAVSVLLSRTARKRGKAGHKSRDLREIVALNREDSLTTREDKEAAFVGQLRAFVDRERSKELHWFVCVGDDSVADADAERVLAERADAETRYRQKVAARGLSGEFAEGLNARHSTARTVREANALPTHSPSFDIFLNEEWHRRHAVLSRFVQAARRIVLRVRAQRRLEKIRAFIAQAGPTPTRQVIAELVVFDNRRVLSSKMGTRAIAAKPHRNSVLEEPVAAGADAHPEPPATPSEGYKATLAVSSVHRFTFPTVRSSGIGATPVTIVEPARVLGGGLFGTSGQAGSTDKEKERRGAAAANAEGPHAHTHTHAHTHGTISAFQRINDPGYFELKVPQQYKLLDYHPHSVEDSMGYVAHERDRVLRTGAEDELFARGDIGAQRAMEAYVLDDPLPARRGLGAPQEYAPLHIFNPTPGVISFTPALPFSEIEAGHAFRAVKEGMDASDVVAGLMTWREPRYAALVDLQSGPYLSDVWLPRWSDPFAEDLVPHTVPDLLDGLPDDDVLSDDSDSEDEFYAERAVPGSQAVQPVTHTHLVPEMVGALFYVPQTQSQAQPQSQSQSQAQTQSSTPSREVPMPAVAVASGLTVTAGQFSLRSNAAKDDREADFGAHLATQRNRLGAAVSSKVAALNATLARVKL* # PASA_UPDATE: g7879.t1, single gene model update, valid-1, status:[pasa:asmbl_3306,status:3], valid-1 NODE_202_length_31941_cov_41.536 . gene 15641 17592 . + . ID=g7879;Name=g7879.t1 NODE_202_length_31941_cov_41.536 . mRNA 15641 17592 . + . ID=g7879.t1;Parent=g7879;Name=g7879.t1 NODE_202_length_31941_cov_41.536 . five_prime_UTR 15641 15726 . + . ID=g7879.t1.utr5p1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . exon 15641 15981 . + . ID=g7879.t1.exon1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . CDS 15727 15981 . + 0 ID=cds.g7879.t1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . exon 16278 16538 . + . ID=g7879.t1.exon2;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . CDS 16278 16538 . + 0 ID=cds.g7879.t1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . exon 16734 16878 . + . ID=g7879.t1.exon3;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . CDS 16734 16878 . + 0 ID=cds.g7879.t1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . exon 17026 17083 . + . ID=g7879.t1.exon4;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . CDS 17026 17083 . + 2 ID=cds.g7879.t1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . exon 17227 17592 . + . ID=g7879.t1.exon5;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . CDS 17227 17446 . + 1 ID=cds.g7879.t1;Parent=g7879.t1 NODE_202_length_31941_cov_41.536 . three_prime_UTR 17447 17592 . + . ID=g7879.t1.utr3p1;Parent=g7879.t1 #PROT g7879.t1 g7879 MSAMDVDAKLNMPLDDLIRQTKTERRRAPKKGFVPTPAAAWTQDGSGDAVMGGTGAGKATRRRGAKKRLGADRAAVPSSAGLSTKGLANRRNRRGGARGNAMDVDVAGDAQGNWSHDKFAEANPGVRVRAAGGRGRSIVSRLGQSVEASKARAGTKLHVRNLHPNVKQADVFALFSTLGSVKSAKLNVDESGLSLGTAEVVFASRDEADTAMLLNNRLFDGQPMIIKRADDTPAAVKPKKPAGNPASRLFSSSLIAATSQKQKGDLRSRLGVANGGSGSGSGNGPLALSTNALRSQRGRKQQGDVTFTVRLK* # ORIGINAL: g7876.t1 original gene structure, not modified by PASA NODE_202_length_31941_cov_41.536 AUGUSTUS gene 187 4691 . + . ID=g7876;Name=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS mRNA 187 4691 . + . ID=g7876.t1;Parent=g7876;Name=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 187 279 . + . ID=g7876.t1.exon1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 187 279 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 583 705 . + . ID=g7876.t1.exon2;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 583 705 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 844 941 . + . ID=g7876.t1.exon3;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 844 941 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 1165 1271 . + . ID=g7876.t1.exon4;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 1165 1271 . + 1 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 1401 1610 . + . ID=g7876.t1.exon5;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 1401 1610 . + 2 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 1918 2060 . + . ID=g7876.t1.exon6;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 1918 2060 . + 2 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 2234 2314 . + . ID=g7876.t1.exon7;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 2234 2314 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 2453 2571 . + . ID=g7876.t1.exon8;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 2453 2571 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 2701 2799 . + . ID=g7876.t1.exon9;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 2701 2799 . + 1 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 2932 3103 . + . ID=g7876.t1.exon10;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 2932 3103 . + 1 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 3247 3322 . + . ID=g7876.t1.exon11;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 3247 3322 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 3410 3501 . + . ID=g7876.t1.exon12;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 3410 3501 . + 2 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 3614 3723 . + . ID=g7876.t1.exon13;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 3614 3723 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 3808 3943 . + . ID=g7876.t1.exon14;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 3808 3943 . + 1 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 4051 4404 . + . ID=g7876.t1.exon15;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 4051 4404 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 4521 4691 . + . ID=g7876.t1.exon16;Parent=g7876.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 4521 4691 . + 0 ID=cds.g7876.t1;Parent=g7876.t1 #PROT g7876.t1 g7876 VDGEGRSWRSGAVVERRLLNQWFLKITKFAEPLLNDLDGLAWPENVKAMQRHWIGKSLGAALEFPIGGAVGQSQTPVKIFTTRPDTICGVTFLAVAPEHPIVKSGLVPPERRQELDAFVNEVLRTTEMDRITARSDDAMTGMYTGVRCVHPITREEVPVFVAKYVLSGYGEGAVMGVPAHDERDFAFAQKNGLEVRPVLQRREEGMQAPSETPLPFCEEDNAVVVNSTDALNGLSSREAAEKVVSLAISGRWGEGRAQYRLRDWLISRQRYWGAPIPIIHCDVCKAVPVPEADLPVLLPENVALSGRNGSPLAHCPDWLNVKCPCCGGPAKRDSDTMDTFVDSAWYFMRFCDPANVNSPFDTARLSALMPVDAYVGGIEHAILHLLYARFITKFVASQGFLTGAVTEPFKTLITQGMVHGRTFKSSVSGRYLKPHEVDTTGAEPVETETGKAVQIVWEKMSKSKYNGVDPQDMVEKFGADAVRAAMLFKAPPDIVLEWDDASIGGVMRLHTSVIDYASALKTQGTVNRCNAAHDAKRDAAAELRLVAHTAIKIVTNALIVDRTFNTAVSEGMKLTNAIRAAMPVLVADDGIASELDEAFDILMKLLAPVTPHIASEAWSTIQTARGHIVDLKRTSPGVGADGVVGDVHCQSWPVLDPSALVGKALIKVPVAIHGKTRSVIEVPRDSQISFVEKAAQDDPKVQRLLKGKKIKKIIVVAGLKTVNILIE* # ORIGINAL: g7882.t1 original gene structure, not modified by PASA NODE_202_length_31941_cov_41.536 AUGUSTUS gene 24699 25393 . + . ID=g7882;Name=g7882.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS mRNA 24699 25393 . + . ID=g7882.t1;Parent=g7882;Name=g7882.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 24699 24900 . + . ID=g7882.t1.exon1;Parent=g7882.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 24699 24900 . + 0 ID=cds.g7882.t1;Parent=g7882.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS exon 25134 25393 . + . ID=g7882.t1.exon2;Parent=g7882.t1 NODE_202_length_31941_cov_41.536 AUGUSTUS CDS 25134 25393 . + 2 ID=cds.g7882.t1;Parent=g7882.t1 #PROT g7882.t1 g7882 MDTQGTTAPVQCAKGCGFFGNAMMEDMCSKCYRDTLRQRGQDPEAALRQQRERPVVEKEAPATPVKQEIAVSPVGSPASPSQSPAGEEKPKNRCHSCSKKVGLTGFSCRCGGVYCGIHRYSDRHECAFDYKTNGRENIAKANPVIQGQKIQKL* # ORIGINAL: g5531.t1 original gene structure, not modified by PASA NODE_7031_length_478_cov_95.9057 AUGUSTUS gene 2 297 . + . ID=g5531;Name=g5531.t1 NODE_7031_length_478_cov_95.9057 AUGUSTUS mRNA 2 297 . + . ID=g5531.t1;Parent=g5531;Name=g5531.t1 NODE_7031_length_478_cov_95.9057 AUGUSTUS exon 2 297 . + . ID=g5531.t1.exon1;Parent=g5531.t1 NODE_7031_length_478_cov_95.9057 AUGUSTUS CDS 2 297 . + 2 ID=cds.g5531.t1;Parent=g5531.t1 #PROT g5531.t1 g5531 GSACAQASYEERVEFVSEADVMKGLNHRNVVGFCGICEEEPMLLLLELVQHGSLRVFVQHMPPEERATVLTSRLFLNFLRQICEGMKYLVSRNIVHR* # ORIGINAL: g5817.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 10786 11118 . + . ID=g5817;Name=g5817.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 10786 11118 . + . ID=g5817.t1;Parent=g5817;Name=g5817.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 10786 11118 . + . ID=g5817.t1.exon1;Parent=g5817.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 10786 11118 . + 0 ID=cds.g5817.t1;Parent=g5817.t1 #PROT g5817.t1 g5817 MLQHHLLKLSDETDLPTPGGAGVDLHLAFLRYQSLLHPQRNANSAKVALSVASRHRSFMRRPTAGSHVKARPFNMGCRSVAWTKHSRVASPVSSKRSAVKPADNSASAMF* # ORIGINAL: g5814.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 111 918 . + . ID=g5814;Name=g5814.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 111 918 . + . ID=g5814.t1;Parent=g5814;Name=g5814.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 111 296 . + . ID=g5814.t1.exon1;Parent=g5814.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 111 296 . + 0 ID=cds.g5814.t1;Parent=g5814.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 904 918 . + . ID=g5814.t1.exon2;Parent=g5814.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 904 918 . + 0 ID=cds.g5814.t1;Parent=g5814.t1 #PROT g5814.t1 g5814 AAPAAAAEKPAAAASSEESGDVDESGVEAKDIELVMAQAGVSRPKAVAALKNNKGDIVNAIMELTM* # ORIGINAL: g5826.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 56306 58853 . - . ID=g5826;Name=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 56306 58853 . - . ID=g5826.t1;Parent=g5826;Name=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 58482 58853 . - . ID=g5826.t1.exon1;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 58482 58853 . - 0 ID=cds.g5826.t1;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 57926 58336 . - . ID=g5826.t1.exon2;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 57926 58336 . - 0 ID=cds.g5826.t1;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 57473 57667 . - . ID=g5826.t1.exon3;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 57473 57667 . - 0 ID=cds.g5826.t1;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 56685 57287 . - . ID=g5826.t1.exon4;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 56685 57287 . - 0 ID=cds.g5826.t1;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 56306 56542 . - . ID=g5826.t1.exon5;Parent=g5826.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 56306 56542 . - 0 ID=cds.g5826.t1;Parent=g5826.t1 #PROT g5826.t1 g5826 MAASDFGKVNCTNKNVLDWVAETAKMCRPSSIWWCDGSQGEKDALTQEALDKGILIKLNQDKLPGCYLHRSNPNDVARTESLTFICTPTKEDAGTTNNWMAPDQMYAKLTELFTGCMEGKTMYVVPYVMGPLGSRFSKIGFEITDSIYVVLNMRIMTRMGTCALTMLGDSNEFNRGVHAVRDCNPEKRFVCHFPQDNTIWAVGSGYGGNALLGKKCLSLRIGSYLGRDEGWLAEHMLVLEVESPTGQISFVCGAYPSQCGKTNFAMMEPPKRFSNWKIRTVGDDLAWLRPGDDGRLWAINPENGYFGVAPGTNNSSNHNAMESIKRDTIYTNVALTPDGDVWWEGKTDVVPEELIDWQGRPWKKGSSEKAAHPNSRFTAPSYNNPAISKHVDDPNGVPVSAIIFGGRRATTVPLVMQTFDWTHGVYVGATLGSETTAAATGTVGIVRRDPMAMLPFVGYNMGEYWSHWLAMRAIIPHPPKIFMVNWFRKDAKGKFMWPGFGENMRVLQWIIDRAYGRVGGQETLMGWVPREGDLDLSGLSIAPDTVDAVCNVDLAEWKAEIESQESWFKSIGPSLPKALELQRQLLLAKIDACQAAKAFKTAPGK* # PASA_UPDATE: g5825.t1, single gene model update, valid-1, status:[pasa:asmbl_5038,status:12],[pasa:asmbl_5039,status:12],[pasa:asmbl_5040,status:12],[pasa:asmbl_5046,status:12], valid-1 NODE_27_length_60634_cov_45.051 . gene 49340 55833 . + . ID=g5825;Name=g5825.t1 NODE_27_length_60634_cov_45.051 . mRNA 49340 55833 . + . ID=g5825.t1;Parent=g5825;Name=g5825.t1 NODE_27_length_60634_cov_45.051 . exon 49340 49409 . + . ID=g5825.t1.exon1;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . CDS 49340 49409 . + 0 ID=cds.g5825.t1;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . exon 49569 49672 . + . ID=g5825.t1.exon2;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . CDS 49569 49672 . + 2 ID=cds.g5825.t1;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . exon 49887 54975 . + . ID=g5825.t1.exon3;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . CDS 49887 54975 . + 0 ID=cds.g5825.t1;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . exon 55173 55833 . + . ID=g5825.t1.exon4;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . CDS 55173 55708 . + 2 ID=cds.g5825.t1;Parent=g5825.t1 NODE_27_length_60634_cov_45.051 . three_prime_UTR 55709 55833 . + . ID=g5825.t1.utr3p1;Parent=g5825.t1 #PROT g5825.t1 g5825 MEFNRFIEYIAIIGIDDADSDHNDRRPSDPIGRFAPKILHRFPTTDHDDSPFVPEISMFCHPTGWTIPKKWTQPTFFVAVMTELSGARFYIACFNFVERRPTSSSAPPDAGLTPRSICIVSRHPFIDAFSTILRFVYTNYCCASSRDAGDGKQKQPLEVVLARIATQIPVAPRGGTRLKIRLANIADGDEIVVHRPPRYLPMHSSTPLSLLFRLLDVENVLTLFGGILTEQRILFQSSSVGLPSSVSQALMSLMHPFVFSHSFIPVLPESAIEVISAPTPFVIGMHASMAPDKPAMSDVIEVDLDTNRLTIPDDMILPRLPAREARDLANGLRRVLHPDVISSDLAWGRPLRKAFSGDAADSMLLDYEIKCVFLRFMASLLHRYRDFVTVVRVHPEMHTIFDKEAFLASMHPKEVPDVPVASTFGRPNEPDRHEFVARLIDTNAFSTFVDDYSPSFRTRDVFDDFAAAFYADPSGVTAPTAEAMIDTLNSSFAATTEEFVVCEGTGYTPSSKCIVTDCGEFPALDDAKLVALEKEMALTPPLQLPGHVTQEVILKDDSSVHVPPVSANVVAASRVRTSTTTFARSLRHGSFSRRLKEGATSAKREEADSISQVLKTIFEGNPSDAHDKVAGLRRTFRDESSRYHFAVELSKRSHHSGQLSGEQFDLVVRLINHALRDEHESKEMRAAAVLLPILNSFYRDVNGVSMYAYHLAGNHLVWSNMNFWINSFYATVEEELAKLYGRASIAHNREVFGERLKATTSATSEEKAAFARTESDRIFGKLSFYASNLVWLEVGDSETTRFIETVCGTTQLGGDMADELKALVTTVRALHNSSKTLIEREYEASPDLKRPLVAELPLLPAETLLYRQENVQLIPTVGRAGADRRPAVGSLFITNYRIVFRGFEMALGPMGTALASPTNASSSALECSGSGGDILALSAAGCPTEAASGRSHAVISRHMPIWSIRKLKSTTFMQIQEFGIWVPPGVEILSDTFQTMWLCIDDMPDPTMASTGSDFVSVTSADGDRCFTAQSLERYLSSRLRGATCFAMQQAAKEVPEEESGVLSIRIVALAKSRMQTIRRSKKKEGSMEDLVALQEAAGVHADALPETVALVREDYVRMAAIPATARSEADLDGEESAPFRETGANANYQLCESLSQLLIVPNMMVDAELNAVANFHAHRRLPTLSWLHPNGRCAIYRSSLPRSRRGLANSRCLEDEKYIRSLVMATALPMRKESQGMAAAPPNFAVTGGITRKDSQGTQTPPPPTSGPTRKDSAVSITSSSSGNGGGMGTDSAPPRPSVPTEMLSLYVITERAGNSVMGGVAARRQDAYTEAGVAYYPTCEFYYLDGGEPTTNLRPWDRKQLQISYERLLGVLGVGAYNAEELWTAVQETGWLQGVAGLLSRSCLVVDIVHRLGSSVLVCLEQGWDHTAQIISLAQIMLDPHYRTIAGFRVLVEKEWLSAGYKFASRGGRFHGSSVGSPSPAERAPLFLQFLDAVFQLTRQFPLAFEFNDSYLAALAHHECSLRFPTFLYDTEQARLAGQATSSRQSREQVLGGQQQSVWDFLRGVHTKTPRFLNVFYATGTGFMRPHFDDAAMVLWDHYITGELCERYETASGDDGPFAGVARLLLRHAETSRIANIVAVCHDEGNTGESCGSLHRPLKKKKRSPQREDDGPIGGEPTWLPAWLRVRNDVCAPYDVSWRAKDVPAVHWLLKSKVPASCGPHRFAITNFLKPTWCELCGQLLYGVARQGLRCTDCNYNCHERCRTFIPPNCRGNRNDEDNNERDADAPVDMPGHMGYLFKMGNKVKNWRLRWFSLDPGNMKLYYYENKGSDTLLGSIDLKVVTSVNAVEPPVQGGFLASLLGSGKQFFYFEVATPNRRFLMRSEEEDIRLRWIGELRAVLARRGNAERELNEAMLRRKSAPDADAGTVDDD* # ORIGINAL: g5822.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 36000 39012 . - . ID=g5822;Name=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 36000 39012 . - . ID=g5822.t1;Parent=g5822;Name=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 38190 39012 . - . ID=g5822.t1.exon1;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 38190 39012 . - 0 ID=cds.g5822.t1;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 37851 37948 . - . ID=g5822.t1.exon2;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 37851 37948 . - 2 ID=cds.g5822.t1;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 37473 37598 . - . ID=g5822.t1.exon3;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 37473 37598 . - 0 ID=cds.g5822.t1;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 36000 37133 . - . ID=g5822.t1.exon4;Parent=g5822.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 36000 37133 . - 0 ID=cds.g5822.t1;Parent=g5822.t1 #PROT g5822.t1 g5822 MSVRVSAFRGTALSVMIVLAMSATATLASRSDDDFLTQQPDNVAGMPSIPCATQGMQEGPVDPAWVAWTADGSAVVNARTTGSDMTARVIATLQSGPTRDMLSVFQSHLRAYEECLRNRGRQPQTQFVSGGIFCNLETMPQDLVLEAGSFFAVDQRLAHLCFTSLLVGQFNNREPAASSTLLALAERLGGMSNCTSTVPLYERALAVLENQCRAAGKPGKECIQGFKETKWRKLLDSCRALEWSGGRVPLMGSPPLVFVKPADTEAERSTEEKTDGVTCKTCQCVTSGCVRTDSIVEYLSQAKSSLQQYLARGRYAFFSQETVHAVLGNESGDLDSVISAIVHAFHMWRTRNPQDMTLYVPVLNMRRRDFESRGEVVRVLKSVGIRPEEHLVFIDGSKVVEGPLELSPSGMETDVDDGAGFLEQLLDDGLLRITLVDHNAPTPRQSHIETAIVDVIDHHAEEAAVKTGLWGLDDIPPFMAYRKTIVRVGSCATLVSERMISETPRSVVHGGIDEGVPFIDCVSARLLLNAIIADTHALNVSRGSTTPRDVDAVNSLVRACPGALDGKDPFVVYAELVAAKEDVAAMPTVEILARDFKQAACGRLLLGVSAVPIAIHKLAARPDFESAATEFVAGRRLDLYAIISDQKGKRKLALAAVRDNPVARAAVESFGESNDAEELQLTPLKERKADRLKAAGFVAYKQQNSNASRKVIFPLLRKHIEDCLYG* # PASA_UPDATE: g5827.t1, single gene model update, valid-1, status:[pasa:asmbl_5041,status:12], valid-1 NODE_27_length_60634_cov_45.051 . gene 59762 60418 . - . ID=g5827;Name=g5827.t1 NODE_27_length_60634_cov_45.051 . mRNA 59762 60418 . - . ID=g5827.t1;Parent=g5827;Name=g5827.t1 NODE_27_length_60634_cov_45.051 . exon 59762 60418 . - . ID=g5827.t1.exon1;Parent=g5827.t1 NODE_27_length_60634_cov_45.051 . CDS 60011 60418 . - 0 ID=cds.g5827.t1;Parent=g5827.t1 NODE_27_length_60634_cov_45.051 . three_prime_UTR 59762 60010 . - . ID=g5827.t1.utr3p1;Parent=g5827.t1 #PROT g5827.t1 g5827 MVSTVVCAEVCFMLVCIYSFSIIFPRLTLQVAKLLLEKEVIDRDDMITVVGKRPFPEKSTYEEFVAGTGDEEENLELPPGLRNMRLSEDTDKKDEDNDGEDGSDENDDAKSKEESSGDAKESGDKDAKDSTSKKE* # ORIGINAL: g5818.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 12094 21149 . + . ID=g5818;Name=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 12094 21149 . + . ID=g5818.t1;Parent=g5818;Name=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 12094 15604 . + . ID=g5818.t1.exon1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 12094 15604 . + 0 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 15770 15868 . + . ID=g5818.t1.exon2;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 15770 15868 . + 2 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 16091 18909 . + . ID=g5818.t1.exon3;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 16091 18909 . + 2 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 19196 19509 . + . ID=g5818.t1.exon4;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 19196 19509 . + 0 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 19659 19738 . + . ID=g5818.t1.exon5;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 19659 19738 . + 1 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 20206 20303 . + . ID=g5818.t1.exon6;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 20206 20303 . + 2 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 20564 20664 . + . ID=g5818.t1.exon7;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 20564 20664 . + 0 ID=cds.g5818.t1;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 21038 21149 . + . ID=g5818.t1.exon8;Parent=g5818.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 21038 21149 . + 1 ID=cds.g5818.t1;Parent=g5818.t1 #PROT g5818.t1 g5818 MPPPERQQTLDAWRRTDPASRGQKPTPQLQQQQQQQQQHLRGVVGPVHRPPAVDNSRTVRNPFRPADESASAVVRRVDTSRQHVGPVDKKSNAASIDDDDDDAMLLALAMALEETENAAPVNISNTAREPSRQSIPAVGTRNDSLPQSNKGPVNPYKANPYKAAPAPAALAVGGWERGGASQNGRQSVLVTPATGGVAIAGGRASDIPKAASAGGERPANGKADAKEPEKGGRGASAGGGVSLRCASATVGGYIDNMERANLGLPAYDQGAIGEWIYPTNYPVRDYQLNIVKRALFKNTMVTLPTGLGKTFIAAVVMYNYYRWFPDGKIVFLAPTKPLVAQQIDACVNIMSIPKCVTAEMTGTKTPTLRSEIWESKRVFFLTPQVVQNDLNRGTCPARKIVCVVVDEAHKALGNHAYCAVVNELAQQGARFRVLALSATPGDIVATVQEVLSNLCISAIELRGEDALDIRPYVHGRKLEVVTVPLGQRVLAAKKAMSGIIGNILGRLCNARAFYERDPEKAHRYALLKQRDKYRTNPPDGGRGSGQVEGDFAVAISLAHSFELLQQHGLSSFYQQIRPILEGKKDGGGRARNELMRSTEFMEIYAALDAAYGSSAPGNSVGAAGSDARDGDDPIEASHPKVQKLLEIVVEHFVSAAEKGDGESTRVMVFSQYRDSVREIVSALSQHRPLVRPMAFVGQSSKGSKGLTQKEQMEAVRQFRSGGHNTLVATCVGEEGLDIGDVDLIVCFDAQTSAVRLVQRMGRTGRKRDGRIVMLVAEGKEELTYKKGQTTRKSIHKAIVSGQGTFTLAADQPMLPEGCKPIMRMEEMAAPKEASPVAATKRKNARSASSKPAGGASAGRGADVGKGKKRATVAAGTEPDSGVGVGVGDGSDGLLTSDEHAYYLSKYAIDGGLGPYDGWWMELSTVASWQSAPMPVRLASHSVLSRALVAACQMADDAASGGRACASYEDELVTHLDMRDVIVRGKDDARGGNDAGKGAHDVVKPNDGCAMDVDTTEGKEVAAATHTRKLKGARTPAVEAVFFDDNAVFRARENEDDDADLMADWKSPVVSEVRVASKAVPAGNNARGNAPVALKKAEGVLLPPKRQDSNRQHHQELPQLQQLQQLQQPQQHQQSHQLKDLRANERGDRNEEPFARSAHGEAATTDAIRAETPIGNQPPAAVFTIGDDDDAFGDAMDCGDCESEPEVNPWLARFADFLPSEPEDKDIPGDRRPAVTTADDDALPWSIPSPSDALAGAEPAVGIDRHVSPRGHDTSERVAPALDGQRCAADGHVPHNSDAFYASPVKDAGSHVPPVDMCSATVTESVGGDVAQPVGTPTPAAPIAAHVATAKQDGHVRPVNPYRTTSKLSLKRASPQLQRVQKADGQLQKTSTGTGSLMEPLTTTEEHGGQPSIGKQPLSIALSADCVPHGVGSGSGRGAAANGPVAAIDLCEPRASSQEATPVLRRTRRKRRHAFLSPDADEMLGVDGGLAACGESDLVQETHDGTGESRKRVSRGKRKKADAMWSHGEEDDEDGGDARGRGDVKRRKRIVRAGASDNDNDALVVENGSTKAQSDRPCGGVAARKSGRIPAAAVTHCDDSGDSDDAFEVAPKSRAKRKRAIGSDEDDDVSERKTKSAASRASSKPSTMLCKESGNKAGNGASNKRDRAPQSPPGKAGGRCAKRENKKKKPRKRVGGFVDDEAEESDDCSGESDDPDGSDLDEYEACSFIDDGQSQSQSQSQSQSQSQSQSQSQREGGGRVGRAAAESIVSPSSMMALYQRSLLSPDANPVFRSAPVNAAGAARYRMGRRTKETLSDMEGEAEEVAGMIGDEREIGSDDSDGSDDDSEGNDEHIDDNDACANESDRHVRKAVLKRRCISESPLSDEKHVIGGIAKSSGTSGVPQRHQQQQQQQEASIATIKTVPYGSSVNSVNSAKAAGHSGNTASVKAPTHANTLGAPPPVPAPVPPIVALPGFDLSVDELLAIISDDDSEEEVNARLPPPKPAPVNVGIALPTPAAFPAANCGHAHSQLTHKAVVPSSRATLSSVRSSMPNFSLDASAIDLSDDDNTDCGDARNITDAVTSYVMPARGAVPVDLVVGGIFDATPPSVIQQSVGGSMGSRGSGAACEGGRLVVLVDTRQVMASQALSVLRSQHAARTVVPPLGISCDYIVSQRAGVLRRTQQDILNAVATTAMSAGAAAGDGDISAVGPTAGAKLYDHVLSLRAQFEKRFLIVEKTVKTKGTGGVADKGISGRQYEIGIAAVTRLGVIVLYSEDKDETAAILASLARREADLGFGVSEALVDAKVDLQMLRFLVSIPCISYTNALNLMAFAGFDSLQSILASPVDALVRRTPFLTEKTATELRRYCDTKFDAEMVPRK* # ORIGINAL: g5824.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 46933 47916 . + . ID=g5824;Name=g5824.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 46933 47916 . + . ID=g5824.t1;Parent=g5824;Name=g5824.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 46933 47916 . + . ID=g5824.t1.exon1;Parent=g5824.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 46933 47916 . + 0 ID=cds.g5824.t1;Parent=g5824.t1 #PROT g5824.t1 g5824 MDTVEVDATSAAAAVSDSSAAASLAAQTSPQSAAGAEEMATAAVTDGESRTEGSRPETAASPLPTSREEIYGESSTEGYNEGYEEGYNEGYNEGYNEGYNEGYDDGYHEGYHEGRNEAYAECRRDFEEEDDAAEASNSKPKGSTKRAQKQRNKEQPFGFVYVLTGSSASDVKVGCAKDALQRLRVAQTFNASIRVDGIYWTRDCKEAERQAHRRLVESGHPRVMFANAWARTLRRAESEWFRCSAADALPIVRDVCEKVSLELSQSEAAISHEQTEGLRLQGAFDSVRPHMESPDNNIQPPRWTPPNSTHDDAQKREEEVRRQLGFN* # PASA_UPDATE: g5815.t1, single gene model update, valid-1, status:[pasa:asmbl_5033,status:12], valid-1 NODE_27_length_60634_cov_45.051 . gene 1270 2117 . - . ID=g5815;Name=g5815.t1 NODE_27_length_60634_cov_45.051 . mRNA 1270 2117 . - . ID=g5815.t1;Parent=g5815;Name=g5815.t1 NODE_27_length_60634_cov_45.051 . five_prime_UTR 2062 2117 . - . ID=g5815.t1.utr5p1;Parent=g5815.t1 NODE_27_length_60634_cov_45.051 . exon 1270 2117 . - . ID=g5815.t1.exon1;Parent=g5815.t1 NODE_27_length_60634_cov_45.051 . CDS 1270 2061 . - 0 ID=cds.g5815.t1;Parent=g5815.t1 #PROT g5815.t1 g5815 MRRDASTTALDSQRPPDWLPKVRLTTPATGHCRSNMSDSSVIAAVAAFFAKEGISVDEKIVAITAQNNRSGRFGSAIIDFGSHTVAPNFSRANELTLGNVEKRTTSSSGEVIVGYKIGLSRDGVSASTASSELASPDGASFPCCSQMCDYRPQRLDKEELFTSFKNERGSAPGIVFELKTQVDNGPLLRTDYYKLVDGRRIKVSNEYHSKLHAYKNYKCTSHNLFFAVDLRSDSSATYNTHHMRINPFTQNPDVLIQILAEIK* # ORIGINAL: g5819.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 21634 26480 . - . ID=g5819;Name=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 21634 26480 . - . ID=g5819.t1;Parent=g5819;Name=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 26289 26480 . - . ID=g5819.t1.exon1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 26289 26480 . - 0 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 25916 26070 . - . ID=g5819.t1.exon2;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 25916 26070 . - 0 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 25397 25514 . - . ID=g5819.t1.exon3;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 25397 25514 . - 1 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 25099 25208 . - . ID=g5819.t1.exon4;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 25099 25208 . - 0 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 24602 24728 . - . ID=g5819.t1.exon5;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 24602 24728 . - 1 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 24211 24321 . - . ID=g5819.t1.exon6;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 24211 24321 . - 0 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 23767 23836 . - . ID=g5819.t1.exon7;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 23767 23836 . - 0 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 23230 23391 . - . ID=g5819.t1.exon8;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 23230 23391 . - 2 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 22019 23015 . - . ID=g5819.t1.exon9;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 22019 23015 . - 2 ID=cds.g5819.t1;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 21634 21769 . - . ID=g5819.t1.exon10;Parent=g5819.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 21634 21769 . - 1 ID=cds.g5819.t1;Parent=g5819.t1 #PROT g5819.t1 g5819 MAARSNKLPDNLPQLQNLIKRDPTLYREEFLQQYRHYKANLEIFKLKPSQEGKAFGDLANFVSHVVQCYPEELSTFPDEIMSLLSEHYSVLPSDLRQTLCKVLILLRSKDVVSSTTVLELFFKLFRCNDKHLRELLHRHIVADIKNMNAKHKNNKANKTLQNFMYSMLNDSSQIAAKKSLDVMMELYKKNIWNDAKTVNVIATACFSKVTKILVAAIHFFLGTDESDGQDSDDDTESDKVTAKSLMLANRVAKKKRSSQRRLERALDGLKKKDRSKGKQNAANFSALHLLNDPQGLAEKLFTQLRTSTERFEVRIMMINLISRLIGTHQLFVLNFYPFLQKYIQPHQKDVTLVLAYAAQSCHELIPPDVLEPLLLALVNNFVNDRSSVEVMAVGLNAAREICARCPLVMTEALLGDLGQYKTHRDKGVSNAAKSIIQLYRAVNPALLRKKDRGAPKAAGDDEEAFGEDDATGKPAGASRQYGAQRTAKFVPGAELLAEEMARQGAEGGETKEGNGWEGWETDSEGSDSEGEGEWMNVSHSEDGGSDDDDMDAEGDVPVEIDPETRKRLANEISTQRILTPEDFAMIRKLQLKKQLDGPASRRGKKRKLTDVKEEDEEAAAAADIALRPSEIVDPESIEAGAKKRRHDYDARLQTVLEGREGRETFGSKKGKHNAEKSQTNRDKRKTKNFMMVLHGQKMRDKQLRSMRDRQVQERASIERRRKSNL* # ORIGINAL: g5816.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 3516 7823 . - . ID=g5816;Name=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 3516 7823 . - . ID=g5816.t1;Parent=g5816;Name=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 7203 7823 . - . ID=g5816.t1.exon1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 7203 7823 . - 0 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 6826 6909 . - . ID=g5816.t1.exon2;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 6826 6909 . - 0 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 6349 6504 . - . ID=g5816.t1.exon3;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 6349 6504 . - 0 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 5481 6217 . - . ID=g5816.t1.exon4;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 5481 6217 . - 0 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 4732 5158 . - . ID=g5816.t1.exon5;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 4732 5158 . - 1 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 4304 4491 . - . ID=g5816.t1.exon6;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 4304 4491 . - 0 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 3748 3926 . - . ID=g5816.t1.exon7;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 3748 3926 . - 1 ID=cds.g5816.t1;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 3516 3598 . - . ID=g5816.t1.exon8;Parent=g5816.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 3516 3598 . - 2 ID=cds.g5816.t1;Parent=g5816.t1 #PROT g5816.t1 g5816 MSGRAQRASTRATAATPKAVPRAAPKAAPKAKPEKTVAIKQTKSAAPPAKKLSGNASAAAAKPAVPVAAAPAVPAATVESHRAASKSRKRPLMEPETEEETDLFPVDAAADSASDADTSDSEESVFSGLEEEEEDESASDDEVDDDDDEGSDGSEEDAAEKGDDASEASAESEENAPLTGSATTKREIMKKYGEIDTDSDSDSSADEHSRNPIGNVPLEWYNEYPHIGYDIDGKKIMRPAKGDELDTFLKKMDDPDYWRTVEDKLTGLDVVLNDDDLELISRLQQGQFPEGHYNPYEDSVDFFTHEKMIHPLSDAPEPKRRFTPSKWEHKRIMKIVRAIKAGLIGPKTIIQKPEFYPLWDDDTDRARADHPMHMPAPKVRLPGHDESYNPPAEYLPTKEEAEAWKTAHPDDRDKNYLPTKYSSLRSVPAYNRFVQERFERCLDLYLCPRMKKARMHVDPESLIPKLPKAEDLRPFPTRLVVTYVGHTGKVQCVSPDPTGQWLATGADDGTVRYWEVATGRCLGTLELGGVAHSVAWNPNPSASIVAVAVGNRVLLTNPPSNQRETAAAIDVLIRGTGVAASSDADSKAPPASWDTPTEKESARGVRLVLTHNKEVRQITWHHKGDYLATVQPDATSTAVLIHQMSKRRTQAPFKKSKGLVQRVLFHPTKPFFFVATQRYVRVYNLAKQELTKKLLAGVKWISSLDVHPGGDNVIIGSYDKRLCWFDMDLSSTPYKTLRYHKLALRQVCFHKRYPLFASCSDDGNIHVFHGMVYADLLQNPLIVPVKILTGHVTVDSLGVLDCQFHPTQPWLFSAGADSTVRLFS* # PASA_UPDATE: g5820.t1, single gene model update, valid-1, status:[pasa:asmbl_5043,status:3], valid-1 NODE_27_length_60634_cov_45.051 . gene 27438 30526 . + . ID=g5820;Name=g5820.t1 NODE_27_length_60634_cov_45.051 . mRNA 27438 30526 . + . ID=g5820.t1;Parent=g5820;Name=g5820.t1 NODE_27_length_60634_cov_45.051 . five_prime_UTR 27438 27647 . + . ID=g5820.t1.utr5p1;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . exon 27438 27772 . + . ID=g5820.t1.exon1;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . CDS 27648 27772 . + 0 ID=cds.g5820.t1;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . exon 28019 28375 . + . ID=g5820.t1.exon2;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . CDS 28019 28375 . + 1 ID=cds.g5820.t1;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . exon 28512 30526 . + . ID=g5820.t1.exon3;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . CDS 28512 29295 . + 1 ID=cds.g5820.t1;Parent=g5820.t1 NODE_27_length_60634_cov_45.051 . three_prime_UTR 29296 30526 . + . ID=g5820.t1.utr3p1;Parent=g5820.t1 #PROT g5820.t1 g5820 MACPHLRRLIEPFNLALESYKCIDCGLHLGENPVCALRPPGSDTCPHTHHVVLELDSEERTMCKRCSLLLRRITFNEDMRLTVRDYFGPTLVTESEMRRDSTASTVSNVSTISGFSGVSTAMSELSAASFEETARVPELPADREDSKSGVAGSKPKQRRSSVGRMMKEQRRPYRVYRCECHPGGKVWREPCMFARHRQHTHSAYPFDSFEDITAGLPKVVSRKTLEELYEVQRRTKKASPSSRRASMELPPHQMQQQQQQQQQQQQQLQQQQLQQQQQQQLQQHQLQQQQQQQQLLLHQQQQQQTGLTLQMRTHAAALAQQQHQQQLQQQQQQQHQQQLHATAMQLAAHAAQSMFSSAQSSPTTATMPARIQRPPVVLNSPVKGHVPIVPTSFAADYRIIPITHRPVAPASASLHAPAMPE* # PASA_UPDATE: g5823.t1, single gene model update, valid-1, status:[pasa:asmbl_5044,status:3], valid-1 NODE_27_length_60634_cov_45.051 . gene 40135 46425 . + . ID=g5823;Name=g5823.t1 NODE_27_length_60634_cov_45.051 . mRNA 40135 46425 . + . ID=g5823.t1;Parent=g5823;Name=g5823.t1 NODE_27_length_60634_cov_45.051 . five_prime_UTR 40135 40195 . + . ID=g5823.t1.utr5p1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 40135 40198 . + . ID=g5823.t1.exon1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 40196 40198 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 40546 40662 . + . ID=g5823.t1.exon2;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 40546 40662 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 40933 41029 . + . ID=g5823.t1.exon3;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 40933 41029 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 41372 41675 . + . ID=g5823.t1.exon4;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 41372 41675 . + 2 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 41951 42161 . + . ID=g5823.t1.exon5;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 41951 42161 . + 1 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 42484 42567 . + . ID=g5823.t1.exon6;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 42484 42567 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 42847 43053 . + . ID=g5823.t1.exon7;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 42847 43053 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 43221 43262 . + . ID=g5823.t1.exon8;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 43221 43262 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 43464 43570 . + . ID=g5823.t1.exon9;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 43464 43570 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 43740 43950 . + . ID=g5823.t1.exon10;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 43740 43950 . + 1 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 44189 44344 . + . ID=g5823.t1.exon11;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 44189 44344 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 44598 44720 . + . ID=g5823.t1.exon12;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 44598 44720 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 44914 45084 . + . ID=g5823.t1.exon13;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 44914 45084 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 45258 45488 . + . ID=g5823.t1.exon14;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 45258 45488 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 45660 45803 . + . ID=g5823.t1.exon15;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 45660 45803 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . exon 46064 46425 . + . ID=g5823.t1.exon16;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . CDS 46064 46246 . + 0 ID=cds.g5823.t1;Parent=g5823.t1 NODE_27_length_60634_cov_45.051 . three_prime_UTR 46247 46425 . + . ID=g5823.t1.utr3p1;Parent=g5823.t1 #PROT g5823.t1 g5823 MSATSGAVTATQTPQEEQEKLLEEANQVVKTQAFQMKRCLDKGKLMDGLKHASNMISELRTSLLSPKSYYELYMAVSDELRYLEMYLVDEFQKGKKASDLYELVQYAGNIIPRLYLLITVGVVYIRGGEAPKKDILKDLVEMCRGVQHPLRGLFLRNYLLQMTKNLLPDIEGDPARDGTTSDSIDFIHLNFAEMNKLWVRMQHQGHSRDKDKREKERQDLRLLVGTNLVRLSQLEGVDVVMYRDLVLPGVLEQVVNCKDAIAQEYLMECIIQVFPDEFHLQTLNKFLNSCKDLHASVNVKNIIISLIDRLAAFATRENSPGIPEELKLFDIFSEEVVNVITARPDMPVEDTISLQVSLVNLALNCYPDRLDYVDKVLQTTVQTLAKANVQSVEKSNPTCLREIIKLLKIPIDTYNSAITLLRLENYGQLLATFGYSTRKSIAVHIVGNVLQNKTTISTPDEVSALLELVGPLVMDQPDQPHDREDIEEFAEEQTLMGRLVHLMDSDAPDEKYQILSTARKFFGSGGEARIKYTLPPLVFSALRLAMKYLASKETDEVWDKKSMKIFHFCNQTIAALAKADFGELALRLFLQSAQAANKCGFENITYEFISQAFTIYEDEISESRAQLAAITLLIGTLQTLTCFVDENYDTLSTKCALHSSKLLKKPDQCRAVCLVSNLFWAGQTQSGERKDGKRVLECLQKSLKIADTCMDSSINVQLFVEILNYYIYYYEKRNEAVTPKYLTGLIDLINTNMANMESTPESEAVGIGRHFQNTLAHIRAMRRNPGNGPSYGDIDV* # ORIGINAL: g5821.t1 original gene structure, not modified by PASA NODE_27_length_60634_cov_45.051 AUGUSTUS gene 30754 33894 . - . ID=g5821;Name=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS mRNA 30754 33894 . - . ID=g5821.t1;Parent=g5821;Name=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 33811 33894 . - . ID=g5821.t1.exon1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 33811 33894 . - 0 ID=cds.g5821.t1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 33509 33616 . - . ID=g5821.t1.exon2;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 33509 33616 . - 0 ID=cds.g5821.t1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 33007 33310 . - . ID=g5821.t1.exon3;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 33007 33310 . - 0 ID=cds.g5821.t1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 32595 32722 . - . ID=g5821.t1.exon4;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 32595 32722 . - 2 ID=cds.g5821.t1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 31653 32376 . - . ID=g5821.t1.exon5;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 31653 32376 . - 0 ID=cds.g5821.t1;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS exon 30754 31334 . - . ID=g5821.t1.exon6;Parent=g5821.t1 NODE_27_length_60634_cov_45.051 AUGUSTUS CDS 30754 31334 . - 2 ID=cds.g5821.t1;Parent=g5821.t1 #PROT g5821.t1 g5821 MAATAAVLRLSPSVLLAENDLFREAKKQIFEARSIGNEFTLSIDDPIPQKLMEALRISSLREVELYLVDPDVPLDFVSPWNEMSALSALQFELARFIPTRQNKGDDNGVACLGYGHNSDVAKDAHADSTTTGAIVYSACMREAVRRANELCAPLGHCGGAADTVMDPACDALMCMGSSLGIFTPKLKIANFAHTGRGMRAEKAIRAMEDVCVLPLESLVSSRTAHASPLSEALRAVEGLPDELVVVLFLIRLAFVDTSTPWKPYVDALPACTCHRCRSPADEDALKGEENGDDGGDDDVASASDTLTLRTRAFSHFGMDPDEFQKVAGATALIDEIEKEKTRLESSYSALFPSLSSYFPALLPHSAYTFDHFVWAQGIVDSRAFTFAVVDGDAPDGPQTHVTALLPVADMMNHSSVAHVIARRYDAATDSLRLVALADVPQGEQVFLSYGPWQNWQLLMHYGFSLHSNPYDTVHFAFSMPDDEEFGGVRSQEEKTTLAALCGLPLSDHYLAVGRLSPSLLACMRLAVATRDELALLRGNPQAIRAKLFKHVTRDNEVRALDTLASVVQSLRDAMLAGIEGDGGTEGSVNGENVAGRRVGENGESLAATGARENVVRFVRGLVDVLNWNSDRVSALLTACEAN* # ORIGINAL: g5528.t1 original gene structure, not modified by PASA NODE_1009_length_14764_cov_53.6141 AUGUSTUS gene 12099 14481 . - . ID=g5528;Name=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS mRNA 12099 14481 . - . ID=g5528.t1;Parent=g5528;Name=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 14218 14481 . - . ID=g5528.t1.exon1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 14218 14481 . - 0 ID=cds.g5528.t1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 13454 14101 . - . ID=g5528.t1.exon2;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 13454 14101 . - 0 ID=cds.g5528.t1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 12986 13218 . - . ID=g5528.t1.exon3;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 12986 13218 . - 0 ID=cds.g5528.t1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 12735 12873 . - . ID=g5528.t1.exon4;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 12735 12873 . - 1 ID=cds.g5528.t1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 12362 12550 . - . ID=g5528.t1.exon5;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 12362 12550 . - 0 ID=cds.g5528.t1;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 12099 12212 . - . ID=g5528.t1.exon6;Parent=g5528.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 12099 12212 . - 0 ID=cds.g5528.t1;Parent=g5528.t1 #PROT g5528.t1 g5528 MRNNQTAAYHALPVDPVSLSDDQQSVSEIVIPVDDLLVNGVDTGDNEGEIRAIEHGLTQEHNKPDGKQWKLDISRFVSQKQSTGTVAWDNLPAKVKDFYKRQNELIDKFVENEQLHGLRGAGPSILFSPQSRPTPPPQQQHQQLPAQSQAAMQQTRSPLHDESRHFRQTSPDELSSGSSASLLMGTGATFRQYGATGSLTASSKQGTRPCSGHSRGLPTDASFDECLRIERQRARLLTSASFGLNVLLFGCKIAATALSGSLSVISSLVDSSLDLFTGSVMYIVSRKLRNVDSRAYPGGRTRLEPIAVIACAAVMATAAVQLISESARDIVAGGREIDLTAPTLAILSFTVVSKLVMFGICRSSSSAIVRTLALDHGNDVVSNVVALVCGFVGAHKWWPADPMGAILVGLFILFNWARAGMQTASALSGAAAEPSLLQQVTFLTWNHDPRVLRIDTVRGYRSGSGYYIEVDIVLPANLPLREAHDVGERLQRKLEHMADVERAFVHVDYEGEHAPSAEHLDPARNNEP* # PASA_UPDATE: g5526.t1, single gene model update, valid-1, status:[pasa:asmbl_27,status:12],[pasa:asmbl_30,status:12], valid-1 NODE_1009_length_14764_cov_53.6141 . gene 6087 8654 . - . ID=g5526;Name=g5526.t1 NODE_1009_length_14764_cov_53.6141 . mRNA 6087 8654 . - . ID=g5526.t1;Parent=g5526;Name=g5526.t1 NODE_1009_length_14764_cov_53.6141 . five_prime_UTR 8464 8654 . - . ID=g5526.t1.utr5p1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 8432 8654 . - . ID=g5526.t1.exon1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 8432 8463 . - 0 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 8149 8298 . - . ID=g5526.t1.exon2;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 8149 8298 . - 1 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 7960 8023 . - . ID=g5526.t1.exon3;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 7960 8023 . - 1 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 7650 7730 . - . ID=g5526.t1.exon4;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 7650 7730 . - 0 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 7333 7422 . - . ID=g5526.t1.exon5;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 7333 7422 . - 0 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . exon 6087 7135 . - . ID=g5526.t1.exon6;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . CDS 6203 7135 . - 0 ID=cds.g5526.t1;Parent=g5526.t1 NODE_1009_length_14764_cov_53.6141 . three_prime_UTR 6087 6202 . - . ID=g5526.t1.utr3p1;Parent=g5526.t1 #PROT g5526.t1 g5526 MVTYLVSKLVCNFLGFVYPAYASYKAIKNKNIREYQQWMMYWIVFGFFAASEVVGDVFLSWLPFYYEVKMLFVLWLIAPKTKGAVVMYRQFVHPTLDQHEQTIDLAIERATDQARETSVRLTQQAFLYARRAVFDAFTMGHAMVAEQVAAQARAIADGQPPVANLPQSQIPLQSSAHTQPIIELIDEDDHRTPTDAQHSNNSNTRGGGASQGIDLDSADEDAVFGSESSAYAQGTQPRTRQPARSAAVRRTRPESQVQPQQQQQQPQPQYTQQQQQQPSAERQPGRANSVRRRALQGQQTSQLSQAPPQAASAQQQREVRSRAQTEPSQQMDATARKVRRNISQPSGQLQGQQQQQQQQQQQQQQQQPQYTQQRSIPGYEPEDILFGGYELGSGPARSHSPASTATGASSGAAAGGQGDGASYAYSRLSSWWYGGSGAGQQGAAQGHAQ* # ORIGINAL: g5524.t1 original gene structure, not modified by PASA NODE_1009_length_14764_cov_53.6141 AUGUSTUS gene 243 1238 . - . ID=g5524;Name=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS mRNA 243 1238 . - . ID=g5524.t1;Parent=g5524;Name=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 1072 1238 . - . ID=g5524.t1.exon1;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 1072 1238 . - 0 ID=cds.g5524.t1;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 799 931 . - . ID=g5524.t1.exon2;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 799 931 . - 1 ID=cds.g5524.t1;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 505 651 . - . ID=g5524.t1.exon3;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 505 651 . - 0 ID=cds.g5524.t1;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS exon 243 413 . - . ID=g5524.t1.exon4;Parent=g5524.t1 NODE_1009_length_14764_cov_53.6141 AUGUSTUS CDS 243 413 . - 0 ID=cds.g5524.t1;Parent=g5524.t1 #PROT g5524.t1 g5524 MEAEAYDDEGGESCAVTWDPSRPPPSVIERYYEQFYAVGVKGKEGNDFYIHLHTNRLCVIGLAPSHPIVQGQLAIKEVVFDRKKKKQQDRAPGEKNTICTVIVNVFPDSVLCDIVCDNGLVFPVYAVLPGELMDKNAGLLTNPQLITSKTSTDGYIGIVAPKAADLRKETASFLSPADYERWRAEPRPEAPSVTPSTPAQSADPQ* # PASA_UPDATE: g5525.t1, single gene model update, valid-1, status:[pasa:asmbl_28,status:3], valid-1 NODE_1009_length_14764_cov_53.6141 . gene 1634 5809 . + . ID=g5525;Name=g5525.t1 NODE_1009_length_14764_cov_53.6141 . mRNA 1634 5809 . + . ID=g5525.t1;Parent=g5525;Name=g5525.t1 NODE_1009_length_14764_cov_53.6141 . five_prime_UTR 1634 1807 . + . ID=g5525.t1.utr5p1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 1634 1834 . + . ID=g5525.t1.exon1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 1808 1834 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 2036 2217 . + . ID=g5525.t1.exon2;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 2036 2217 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 2554 2698 . + . ID=g5525.t1.exon3;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 2554 2698 . + 1 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 2889 3056 . + . ID=g5525.t1.exon4;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 2889 3056 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 3331 3459 . + . ID=g5525.t1.exon5;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 3331 3459 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 3865 4098 . + . ID=g5525.t1.exon6;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 3865 4098 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 4331 4417 . + . ID=g5525.t1.exon7;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 4331 4417 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 4654 4788 . + . ID=g5525.t1.exon8;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 4654 4788 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . exon 5092 5809 . + . ID=g5525.t1.exon9;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . CDS 5092 5559 . + 0 ID=cds.g5525.t1;Parent=g5525.t1 NODE_1009_length_14764_cov_53.6141 . three_prime_UTR 5560 5809 . + . ID=g5525.t1.utr3p1;Parent=g5525.t1 #PROT g5525.t1 g5525 MGSWGDDLWDQYDAISAHTQDGLDFAEKIGNFARARAKIEIEYGNALRKLTKQYQAEKVYKRKNPDDEMPTTVKAWQTLLAETDDVAKQHESIGETLAAQLVESFKTLIKDKTADRKKILAEGAKLQANLKRQMEDLEKVKQKYEKCCKEAEVAHQTFAKADKELNIKKSDVDKLKNAAQQKKQLAEEANNDYILCVEKTNSIRQSYYNTELPQVLNALQQMDEDRTSQISQLFVSYSEIERGTLSIITSCLNNIREGAEKIDPHGDSALFIEDHKSGFMPPGDVQYQEYGKPQLAVAQSQMRRVGSGQQNKPKAGIFGFGKKKEEERDDFGNLPPEKRKKKIKEKIGELQADIDKEKKGRSGMDHMMEVYTTNPKLADEKAMLDLRAQLGDSDKKLEKLNFDLYKYQCYLEALDSTTGTSASAAPGSPQASRPASSNLLDAAAADQAIAQSVEYTSAAAPQAEEQASLGECRVLYDFSSANEGEMTVYAGEVLAVVERDGSGWVRTMRGEETGYVPETYIEFV* # PASA_UPDATE: g5527.t1, single gene model update, valid-1, status:[pasa:asmbl_29,status:12], valid-1 NODE_1009_length_14764_cov_53.6141 . gene 9120 11805 . + . ID=g5527;Name=g5527.t1 NODE_1009_length_14764_cov_53.6141 . mRNA 9120 11805 . + . ID=g5527.t1;Parent=g5527;Name=g5527.t1 NODE_1009_length_14764_cov_53.6141 . five_prime_UTR 9120 9186 . + . ID=g5527.t1.utr5p1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 9120 9332 . + . ID=g5527.t1.exon1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 9187 9332 . + 0 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 9442 9538 . + . ID=g5527.t1.exon2;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 9442 9538 . + 1 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 9644 9745 . + . ID=g5527.t1.exon3;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 9644 9745 . + 0 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 9885 9991 . + . ID=g5527.t1.exon4;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 9885 9991 . + 0 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 10167 10303 . + . ID=g5527.t1.exon5;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 10167 10303 . + 1 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 10506 10628 . + . ID=g5527.t1.exon6;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 10506 10628 . + 2 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 10878 10985 . + . ID=g5527.t1.exon7;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 10878 10985 . + 2 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 11256 11311 . + . ID=g5527.t1.exon8;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 11256 11311 . + 2 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . exon 11594 11805 . + . ID=g5527.t1.exon9;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . CDS 11594 11776 . + 0 ID=cds.g5527.t1;Parent=g5527.t1 NODE_1009_length_14764_cov_53.6141 . three_prime_UTR 11777 11805 . + . ID=g5527.t1.utr3p1;Parent=g5527.t1 #PROT g5527.t1 g5527 MGTPQHVINCSFSSWYPTFKSATIKSIAIPLSEDFVAYLNADGFFMPESTIPAPDRNGTEEDDRDSEEWLARQEDASDGDADNTPHFPELEERIIAAIEELDGRVFPKLNWSAPKDATWISPTGTLLCTCPGDLYLLLKSSDFISHDLGHAFDDVVCPEGMPRPSRPDKHELVLRKWTDISTSMEFRCFVKRHRLVGISQRDCNNHYSFLVDQQEAIRDSISRFFDTSIRGRFPDDSFVFDVYLTSLSRVRLVDFNPWLPSTDSLGFAWSELEEMQVASEAADLQAPTDSSQVAIRVVETAIMQPATHLSYRLPRDVIGMACGEDIETFADRFRSGEFDKRRDAESSDDEEK* # ORIGINAL: g3013.t1 original gene structure, not modified by PASA NODE_11282_length_289_cov_100.537_potentialcontaminant AUGUSTUS gene 2 289 . + . ID=g3013;Name=g3013.t1 NODE_11282_length_289_cov_100.537_potentialcontaminant AUGUSTUS mRNA 2 289 . + . ID=g3013.t1;Parent=g3013;Name=g3013.t1 NODE_11282_length_289_cov_100.537_potentialcontaminant AUGUSTUS exon 2 289 . + . ID=g3013.t1.exon1;Parent=g3013.t1 NODE_11282_length_289_cov_100.537_potentialcontaminant AUGUSTUS CDS 2 289 . + 0 ID=cds.g3013.t1;Parent=g3013.t1 #PROT g3013.t1 g3013 KDIYEALRASPQWNETLFILTYDEHGGFHDHVLPPLNVPDPEDGIETYPDPGFKFDRLGIRIPTLLISPWVPKGLVVGRAPEAQRPFPDSEYDLTR # PASA_UPDATE: g7946.t1, single gene model update, valid-1, status:[pasa:asmbl_3655,status:3], valid-1 NODE_2163_length_7456_cov_41.9866 . gene 3832 5390 . + . ID=g7946;Name=g7946.t1 NODE_2163_length_7456_cov_41.9866 . mRNA 3832 5390 . + . ID=g7946.t1;Parent=g7946;Name=g7946.t1 NODE_2163_length_7456_cov_41.9866 . five_prime_UTR 3832 3950 . + . ID=g7946.t1.utr5p1;Parent=g7946.t1 NODE_2163_length_7456_cov_41.9866 . exon 3832 5390 . + . ID=g7946.t1.exon1;Parent=g7946.t1 NODE_2163_length_7456_cov_41.9866 . CDS 3951 5297 . + 0 ID=cds.g7946.t1;Parent=g7946.t1 NODE_2163_length_7456_cov_41.9866 . three_prime_UTR 5298 5390 . + . ID=g7946.t1.utr3p1;Parent=g7946.t1 #PROT g7946.t1 g7946 MLMFKLHSMTPGQRASGALVLCAGALLCVTMTFINSIASDLVEIKRGVTTVCHDTGIQPQAALPTALTAPADDMLAHGKPRRAAESENAVHTTATRSATEGLVAFAGLSPEQEERMRYCLTVGAAFVEQEMVPPDDIADRREDCAWPNHTYFGKPWEDSLSVSLKSVACNALLRLVDEELYVKRRIHYHVRDGTLLGAYRDGGIIVGDDDLDMTIFVPSEPVYCRRPPFNVPIWRAQAQMGRIFQEISEQHSMSPFHFRFAFDSYIENHAGINLQAYNLSNSNTWTMCRSDVTFVDGFKEKIPIETMCNCKFNGHELRRCTKDPITRTAIESFYGETWWLRLPLFKGFRGGRPSLGLKLRTEEQIQNLLRPFRSVDANGDDLLSREEFLELLRKQNAPSDGLALITGPLLDGRIREANWFYECARNYTLYGTEWAPTSRPSAWGIPKL* # PASA_UPDATE: g7944.t1, single gene model update, valid-1, status:[pasa:asmbl_3654,status:3], valid-1 NODE_2163_length_7456_cov_41.9866 . gene 11 1107 . + . ID=g7944;Name=g7944.t1 NODE_2163_length_7456_cov_41.9866 . mRNA 11 1107 . + . ID=g7944.t1;Parent=g7944;Name=g7944.t1 NODE_2163_length_7456_cov_41.9866 . five_prime_UTR 11 27 . + . ID=g7944.t1.utr5p1;Parent=g7944.t1 NODE_2163_length_7456_cov_41.9866 . exon 11 1107 . + . ID=g7944.t1.exon1;Parent=g7944.t1 NODE_2163_length_7456_cov_41.9866 . CDS 28 1095 . + 0 ID=cds.g7944.t1;Parent=g7944.t1 NODE_2163_length_7456_cov_41.9866 . three_prime_UTR 1096 1107 . + . ID=g7944.t1.utr3p1;Parent=g7944.t1 #PROT g7944.t1 g7944 MGGCGVRYSPSLSFDDPTLRIGRWRGANLACADAQFPALPVTKCKPYPKAPFLWHPLEIARPFMPVRDLRDVWIHIIGDSLDRNSHIFFEKYLPSQLPGPFRRACYRVLGIPPRNETLPFVVNDECTGGLFIPPLPMYLEFLRMITFPTVNVTISYMMFNEHFAARSKYSPPHNGSFSPWTDTAFLDKMKATAFPSDIPAEKMGAPVSEFDPVFSRNRAAVPTHVILNVGLHFVFPLPALLGYPAFLGAVVAQVKRDFPPPKTRLIWRSTAQTQYQNTTLPSFHTCRTTYRVAFVNEVAASIISREGIPVVDYLQFSLGRADAAPDNRHYMESVQNEVVSELFNIIQDCSAAVRK* # PASA_UPDATE: g7945.t1, single gene model update, valid-1, status:[pasa:asmbl_3656,status:12], valid-1 NODE_2163_length_7456_cov_41.9866 . gene 1472 3424 . - . ID=g7945;Name=g7945.t1 NODE_2163_length_7456_cov_41.9866 . mRNA 1472 3424 . - . ID=g7945.t1;Parent=g7945;Name=g7945.t1 NODE_2163_length_7456_cov_41.9866 . five_prime_UTR 3347 3424 . - . ID=g7945.t1.utr5p1;Parent=g7945.t1 NODE_2163_length_7456_cov_41.9866 . exon 1997 3424 . - . ID=g7945.t1.exon1;Parent=g7945.t1 NODE_2163_length_7456_cov_41.9866 . CDS 1997 3346 . - 0 ID=cds.g7945.t1;Parent=g7945.t1 NODE_2163_length_7456_cov_41.9866 . exon 1472 1662 . - . ID=g7945.t1.exon2;Parent=g7945.t1 NODE_2163_length_7456_cov_41.9866 . CDS 1495 1662 . - 0 ID=cds.g7945.t1;Parent=g7945.t1 NODE_2163_length_7456_cov_41.9866 . three_prime_UTR 1472 1494 . - . ID=g7945.t1.utr3p1;Parent=g7945.t1 #PROT g7945.t1 g7945 MRGFVPGCLRRLCLCSIMRRLMSSQASAHSAVLRPALAVGACVCIAIVLFMSQHMSLGFIAPVTYLAEPTAAAAQQHPSMSWEPTATNESMPHIPASVNSEITSSAPSPSLSPRESAPRTWVLCETRQSCAIEALYLNESCGLRVVSQSTQANNAVLFTETVEAYQARTFGHLPRCKHGWEQGRWLIRCPSSAEGALLSTEDVRECDWMSARWQPFECLVPELSVEEARQCLDSVFIVAHGDSTLRDILNATLDIADVRGVDNKHAHGFYHTADLGYPFFFEYFPRWVQLPPGVDISSIKPVPFNQTFADLANASLEVARNESIGGEWARRRRLVIVTGGLHTNEDDADTIRSFAADTHFLSNFAEFLAPTPDVASHGDSVAAVPAGEKSESAVASDDHDHHAPPKPLLVFKARTLTAIFQRTTQSSVPFNTEIKLSSMANGDAFLDAMQVMHAAEHLRHPDRCMCHFGRDFYDDRPLSAGRRIGIPVNRESARILYAIMCPTGS* # ORIGINAL: g7947.t1 original gene structure, not modified by PASA NODE_2163_length_7456_cov_41.9866 AUGUSTUS gene 6362 7429 . - . ID=g7947;Name=g7947.t1 NODE_2163_length_7456_cov_41.9866 AUGUSTUS mRNA 6362 7429 . - . ID=g7947.t1;Parent=g7947;Name=g7947.t1 NODE_2163_length_7456_cov_41.9866 AUGUSTUS exon 6362 7429 . - . ID=g7947.t1.exon1;Parent=g7947.t1 NODE_2163_length_7456_cov_41.9866 AUGUSTUS CDS 6362 7429 . - 0 ID=cds.g7947.t1;Parent=g7947.t1 #PROT g7947.t1 g7947 MGGCGVRYSPSLSFDDPTLRIGRWRGANLACADLLLSPKCGLYPSEQYVWHSLFEQRPVVPPTLRNVWVHLIGDSLTRFLFILLEKLLPKYLTGPSERVCYRVGVTAAGASSPFVVEDELCRSGVQIPELPDHIEFLRMMTFPDANVTVSYMMLNERQARSEYFPPQSSFAPWADPAFLAKMETSARDFAGSVDSATQGGRAARAFVPVFGKAKVPTHVVVNAGLHYVSSVRTIMEYPTFLEVTFAQLRRDFPPPRTALVWRSTAQVQYTNRTLPIFHSCRTSYRVAFINEIAAQMAVREGLPVVDYLQFSLGRADAAPDNRHYKECVQFEIARDLLNVVSGCPLPVPAAVVGRK* # PASA_UPDATE: g4740.t1, single gene model update, valid-1, status:[pasa:asmbl_1316,status:12], valid-1 NODE_1357_length_11791_cov_55.4491 . gene 9117 11409 . + . ID=g4740;Name=g4740.t1 NODE_1357_length_11791_cov_55.4491 . mRNA 9117 11409 . + . ID=g4740.t1;Parent=g4740;Name=g4740.t1 NODE_1357_length_11791_cov_55.4491 . five_prime_UTR 9117 9249 . + . ID=g4740.t1.utr5p1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 9117 9375 . + . ID=g4740.t1.exon1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 9250 9375 . + 0 ID=cds.g4740.t1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 9680 9850 . + . ID=g4740.t1.exon2;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 9680 9850 . + 0 ID=cds.g4740.t1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 10012 10095 . + . ID=g4740.t1.exon3;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 10012 10095 . + 0 ID=cds.g4740.t1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 10349 10423 . + . ID=g4740.t1.exon4;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 10349 10423 . + 0 ID=cds.g4740.t1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 10742 10824 . + . ID=g4740.t1.exon5;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 10742 10824 . + 0 ID=cds.g4740.t1;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . exon 11307 11409 . + . ID=g4740.t1.exon6;Parent=g4740.t1 NODE_1357_length_11791_cov_55.4491 . CDS 11307 11409 . + 1 ID=cds.g4740.t1;Parent=g4740.t1 #PROT g4740.t1 g4740 MATMGPLKRSFAYLKGEGITTFIWKKYWFVLTEEKITYQSNETSQKVLGEMPLSDISECSRVVFSKRKFCFDVRTPSQCFIISLKTESELMDWLEEISKHRGMSIGSPCNFVHEVHVGFNGTTGEFTGLPPQWIALLECSGISKEDRARDPQAVLDVLEFYTGHAEKTHNAVWEKFAQNRGNRISIAPQKKSVHVTSVSRSRGRASCGTLNEC* # PASA_UPDATE: g4739.t1, single gene model update, valid-1, status:[pasa:asmbl_1313,status:12],[pasa:asmbl_1314,status:12],[pasa:asmbl_1315,status:12], valid-1 NODE_1357_length_11791_cov_55.4491 . gene 1715 8401 . - . ID=g4739;Name=g4739.t1 NODE_1357_length_11791_cov_55.4491 . mRNA 1715 8401 . - . ID=g4739.t1;Parent=g4739;Name=g4739.t1 NODE_1357_length_11791_cov_55.4491 . five_prime_UTR 8298 8401 . - . ID=g4739.t1.utr5p1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 8266 8401 . - . ID=g4739.t1.exon1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 8266 8297 . - 0 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 7763 8012 . - . ID=g4739.t1.exon2;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 7763 8012 . - 1 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 7327 7408 . - . ID=g4739.t1.exon3;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 7327 7408 . - 0 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 6947 7067 . - . ID=g4739.t1.exon4;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 6947 7067 . - 2 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 6505 6599 . - . ID=g4739.t1.exon5;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 6505 6599 . - 1 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 5782 6050 . - . ID=g4739.t1.exon6;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 5782 6050 . - 2 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 5186 5600 . - . ID=g4739.t1.exon7;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 5186 5600 . - 0 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 2984 5043 . - . ID=g4739.t1.exon8;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 2984 5043 . - 2 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . exon 1715 2765 . - . ID=g4739.t1.exon9;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . CDS 1872 2765 . - 0 ID=cds.g4739.t1;Parent=g4739.t1 NODE_1357_length_11791_cov_55.4491 . three_prime_UTR 1715 1871 . - . ID=g4739.t1.utr3p1;Parent=g4739.t1 #PROT g4739.t1 g4739 MAETTRFVPEWMKTGSSGTGSPNSKSFSFGAGVSTNGFAALSDDGGVNRYSRDELLALFVKSAPIPEPMKEHVAILSVEMQPPMALIPLTEDEERSMSSIARAPPRGAVASRGRGAPVRGRGRGRGDERGAYGDQAVGLRDWSQDRAPERGLDRLQSDPFARRPKGADEWRSSAPGGFGRGKESERSWRRHGDDDHGDHEEPAESLWDDPNTGAVGEFDGSGVFRELPRRRDERSAASSSATTPATRSLDVSHNSVTSMGTPHQHDQHSSSQSSIRGHMEVPQRQRLPSDSLDEPLSVESDPNNVAISAFLQLSLDQQAANERELSLGDPTQPTQPTPALPSSFGGFGPSMLRPSSIDVGLMMDPGNVRNSLAYGEDLSLQRRRFTGPEEGLSGHLSQRPIGLEGMDGNNWQYRDPYGIVRGPFSDREMDEWLRAGYFPEVLPVRRINEELFVPLGALLAARGGRSPFVGALPQPPPNLPPPHMMMGGFDMSGGRGGNLPSHSGHHYGHHYNIQTPLQAPQMGMGDSHAQPLLQQQALSNARAAWGGVGGIGSYDQPQMLHQQQQVRDVRSAPIGQVQRAHSMGGEDGSYAPNKSSEGTYLPGQGLAALAQQSSVGDDALFGSYGTTGVPPPTSSQGRQEDAGKALEQPSQAPQPVQQQQPIRQQVQKPTPSVATTTTATAPTAAVTLPSPATNAATGNIKSAAAVGTPAQTVYAPKPLQAEKSKPAASGATTKATTATAPSVTTAPAQPAVTPSSSVPPQVPHNAVSLRDIQLQQESEMASRKQAEAQAAAVAQQQSAAAAAASGAKSVWASRNSSSSAATSGAAHDVSAPSQGGLRSILQEEEIIAKRERDRQEQLAKEQLARTVAAAASRDKDDALRRSSDEERIRGWTAAGGVSHSASSAATPAHRHVVSAPAQVTQVASAPKRHVPSLLEIQQQEMAESEARRKEQEAKAAASGVAPGAQVGPSGWPTPSGNRKSLAEIQAEELAQQHAHAQQQALLLQQQQKEQLLREQQQQEQQQQQQQQQQQQQQQQQAQQRIAVTKPVKTVASPVTPVASSTAPKPRTPSQPTGQWASGGERPKSILDIQQEQANKAQFAPPAAPVAQKTSSSPWSRAAGSGPAVTSFASPAAAAALKVAHLNDDTDDDDDGLFWDLEPKAKSAAAPPPARSTKAAPAPTKPALASVVNAAAKPPRSDDFPTLGGGTATAGAKGGKGASHPASVAVPPSNSSKTKSNNSNNNSAQSMRDDDFPVFFEGPPPEFVTWCEQQLKGMSTDVDAETFAGFLWELDSAAEVHEYARDYLGQNAKASDFARAFVERRTKVKATLGWAAKPSMAGKSGSGAGSASAGRTYANPAPQQQQQQQQSAQQGGGKKKKLQRVDPAAILGFNVNASQRTNRGDIQTLD* # ORIGINAL: g4738.t1 original gene structure, not modified by PASA NODE_1357_length_11791_cov_55.4491 AUGUSTUS gene 137 1344 . + . ID=g4738;Name=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS mRNA 137 1344 . + . ID=g4738.t1;Parent=g4738;Name=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS exon 137 299 . + . ID=g4738.t1.exon1;Parent=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS CDS 137 299 . + 1 ID=cds.g4738.t1;Parent=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS exon 734 865 . + . ID=g4738.t1.exon2;Parent=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS CDS 734 865 . + 0 ID=cds.g4738.t1;Parent=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS exon 1180 1344 . + . ID=g4738.t1.exon3;Parent=g4738.t1 NODE_1357_length_11791_cov_55.4491 AUGUSTUS CDS 1180 1344 . + 0 ID=cds.g4738.t1;Parent=g4738.t1 #PROT g4738.t1 g4738 VSPLSSTTGYLADVFVDAKAFAEHADKREVGVDEVKLAVQARVNTSFTAPPPREFLVEIAAEKNVTPLPAFKSLYGVPLPNEAFCIMRSNYQIDPSKRINRAAPEAAQPQQPEAPTQVVMQAPSSMAPVSATGAPPAIGSVKRKRDDDEGFD* # ORIGINAL: g4476.t1 original gene structure, not modified by PASA NODE_1782_length_9274_cov_40.3275 AUGUSTUS gene 2557 6680 . - . ID=g4476;Name=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS mRNA 2557 6680 . - . ID=g4476.t1;Parent=g4476;Name=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 6553 6680 . - . ID=g4476.t1.exon1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 6553 6680 . - 0 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 6267 6372 . - . ID=g4476.t1.exon2;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 6267 6372 . - 1 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 5626 5752 . - . ID=g4476.t1.exon3;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 5626 5752 . - 0 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 5057 5121 . - . ID=g4476.t1.exon4;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 5057 5121 . - 2 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 4791 4877 . - . ID=g4476.t1.exon5;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 4791 4877 . - 0 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 4359 4475 . - . ID=g4476.t1.exon6;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 4359 4475 . - 0 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 3796 3917 . - . ID=g4476.t1.exon7;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 3796 3917 . - 0 ID=cds.g4476.t1;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS exon 2557 3445 . - . ID=g4476.t1.exon8;Parent=g4476.t1 NODE_1782_length_9274_cov_40.3275 AUGUSTUS CDS 2557 3445 . - 1 ID=cds.g4476.t1;Parent=g4476.t1 #PROT g4476.t1 g4476 MILSTGEGTSEVLWELCDDGNNTGGKPGVKLRLRHSDEEHCIRNLPAGHFDLVVTAHAHMIVRRSVLCNVDVFDKAERSVVRDMHRLNRRHKVAVTRIFVTESEAPAELRINFHLQSLIRAPMVVKARLLRRTDTGGETVFPTLSIEAIRGQILRTSEFRRQAASVGLLRPFLLLATMHPATRAHVAAMLSIDNLEQDDSHAAAWQLLSASTKGLQDASAGRMDRLAGKTKKITWTDSLERSLKDIYGRESVRTLRIALEGASAHSAADVGSSHVIECEQAFIDVVAYHFDGTVSHDVRDQAERLSADPRLADFFARLEENGIRGADVRKLLLQMSIIAIYGRREERRAALDRSAGGGEVTADGVAAVSGERPSERRSARKRTYTLGAVSLRGDVDAGPSDVRERGEVADAGVHEGVASGRMANRGRSASEPIPAPLGLSMGAPAVCSIAEELTAEDVMDELRIQLLAGGFDAESSGHKAVRKGTAVAGRVAKKSLIRRVLLVPFAPALVLPYTVFSVASRRFKRDSDVAFAVACMILCGCLMAFV* # PASA_UPDATE: g7672.t1, single gene model update, valid-1, status:[pasa:asmbl_7265,status:12], valid-1 NODE_4383_length_1693_cov_36.5006 . gene 628 1419 . - . ID=g7672;Name=g7672.t1 NODE_4383_length_1693_cov_36.5006 . mRNA 628 1419 . - . ID=g7672.t1;Parent=g7672;Name=g7672.t1 NODE_4383_length_1693_cov_36.5006 . exon 1351 1419 . - . ID=g7672.t1.exon1;Parent=g7672.t1 NODE_4383_length_1693_cov_36.5006 . CDS 1351 1419 . - 0 ID=cds.g7672.t1;Parent=g7672.t1;5_prime_partial=true NODE_4383_length_1693_cov_36.5006 . exon 628 1047 . - . ID=g7672.t1.exon2;Parent=g7672.t1 NODE_4383_length_1693_cov_36.5006 . CDS 628 1047 . - 0 ID=cds.g7672.t1;Parent=g7672.t1 #PROT g7672.t1 g7672 APDWIDGDKCFSCKSPFSVISRKHHCRNCGQVFCQPCSTKSSTIPRYGFEKEVRVCDSCHDKLQGGRGRSNSDEKAGGGVDAVTAANTRNNAGSSSSAAASSMYGSAASSSGVSSPSGGGSKVRHVSFSESNNTTAMYSPAAAPNALASSSLVGDGNDGGGS* # PASA_UPDATE: g11528.t1, single gene model update, valid-1, status:[pasa:asmbl_4778,status:12], valid-1 NODE_2676_length_5475_cov_42.9907 . gene 1713 5265 . - . ID=g11528;Name=g11528.t1 NODE_2676_length_5475_cov_42.9907 . mRNA 1713 5265 . - . ID=g11528.t1;Parent=g11528;Name=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 5211 5265 . - . ID=g11528.t1.exon1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 5211 5265 . - 0 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 4998 5115 . - . ID=g11528.t1.exon2;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 4998 5115 . - 2 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 4654 4831 . - . ID=g11528.t1.exon3;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 4654 4831 . - 1 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 3912 4448 . - . ID=g11528.t1.exon4;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 3912 4448 . - 0 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 3187 3672 . - . ID=g11528.t1.exon5;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 3187 3672 . - 0 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 2566 2979 . - . ID=g11528.t1.exon6;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 2566 2979 . - 0 ID=cds.g11528.t1;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . exon 1713 2354 . - . ID=g11528.t1.exon7;Parent=g11528.t1 NODE_2676_length_5475_cov_42.9907 . CDS 1713 2354 . - 0 ID=cds.g11528.t1;Parent=g11528.t1 #PROT g11528.t1 g11528 MLPRKYFVVFALVALLVPAMVMAQGDDDAELDEDLPRVDPELAGDRVASKTDDQVVQREEEAISIDGLSISEVKQLRQASEKFAFQAEVNRMMKMIINSLYKNKEIFLRELISNASDALDKIRFLSLTDSEKYGDLGELSIRIQADKKNKVLHITDTGVGMTRDDLVKNLGTIAKSGTSEFLQAVQEGNADTGNLIGQFGVGFYSAFLVADTVMVTTKHADDKQYIWESNAESFSIVDDPRGNTLNRGTTVSLFLKDEAQDFLEQETLRNLIRKYSEFINFSIYLHTSKTEQVEEEVKTEEPNAEEKTDEEAKVEDEDEEKKETRKVEKTTHDWQLMNENKPLWTRSAKDVDEDEYNRFYKGFSKDTKDPMAHIHFTAEGEVGFRSILFVPQEARSNLLMDYYKTTTNIKMYVRRVFITDEFEEMLPKYLNFVAGIVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKALEMIKKIADKEDKKEYEAFWKQFGTNIKLGIIDDFSNRTRLAKLIRFASSNSASDNTSLDDYVKRMKEGQNNIFFMAGPTREEVEKSPFVERLLKRGYEVLYLTDPVDEYAIQNLPEFDGKKFQNVAKEGLKFGDETESEKKRIEKTEKSFKPLTDWLKSKLSDAIDKAVVSNRLEESPCALVASSYGWSGNMERIMKAQAYAANNDPNQQFYATQKKILEINPRHPLVKELLKRVDNDAEDETTSDLARVLYETAVLRSGYALKDSADFATRIERMLRLSMDVDVDAKIEEEPEEVVEEVEETEDADDDADEEADADADAAPSYDEDSEHTHEESEHDEL* # ORIGINAL: g11527.t1 original gene structure, not modified by PASA NODE_2676_length_5475_cov_42.9907 AUGUSTUS gene 77 942 . + . ID=g11527;Name=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS mRNA 77 942 . + . ID=g11527.t1;Parent=g11527;Name=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS exon 77 202 . + . ID=g11527.t1.exon1;Parent=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS CDS 77 202 . + 0 ID=cds.g11527.t1;Parent=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS exon 490 615 . + . ID=g11527.t1.exon2;Parent=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS CDS 490 615 . + 0 ID=cds.g11527.t1;Parent=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS exon 766 942 . + . ID=g11527.t1.exon3;Parent=g11527.t1 NODE_2676_length_5475_cov_42.9907 AUGUSTUS CDS 766 942 . + 0 ID=cds.g11527.t1;Parent=g11527.t1 #PROT g11527.t1 g11527 AVNAIVKSSEGDMRKAITFLQSAHRLTGGGSIEEDDILEIAGVIQKDVMSTLMTACTSGSFETLETAVKDATLGGHSANQIIGQMFDSLLALDNVSDKQRSLILVRLAQADHRLSEGADEYLQVLDTLAFAMGVMNGSVVSL* # PASA_UPDATE: g9454.t1, single gene model update, valid-1, status:[pasa:asmbl_3707,status:12], valid-1 NODE_2184_length_7373_cov_41.205 . gene 672 2365 . - . ID=g9454;Name=g9454.t1 NODE_2184_length_7373_cov_41.205 . mRNA 672 2365 . - . ID=g9454.t1;Parent=g9454;Name=g9454.t1 NODE_2184_length_7373_cov_41.205 . five_prime_UTR 2318 2365 . - . ID=g9454.t1.utr5p1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 2219 2365 . - . ID=g9454.t1.exon1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 2219 2317 . - 0 ID=cds.g9454.t1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 2002 2101 . - . ID=g9454.t1.exon2;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 2002 2101 . - 0 ID=cds.g9454.t1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 1631 1872 . - . ID=g9454.t1.exon3;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 1631 1872 . - 2 ID=cds.g9454.t1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 1357 1542 . - . ID=g9454.t1.exon4;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 1357 1542 . - 0 ID=cds.g9454.t1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 1114 1200 . - . ID=g9454.t1.exon5;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 1114 1200 . - 0 ID=cds.g9454.t1;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . exon 672 824 . - . ID=g9454.t1.exon6;Parent=g9454.t1 NODE_2184_length_7373_cov_41.205 . CDS 672 824 . - 0 ID=cds.g9454.t1;Parent=g9454.t1 #PROT g9454.t1 g9454 MASKEIPLYYVDAFATEPFAGNPAAVCLVRASTDLRADEMQKIASELNLATTAFVQELDTSHSFETGSEFVLRWFTPSAEIPMCGHATVAASSVLFDVLGNASSAITFETMRGNLSSSRGDNGTFSLGLPLNPPTDLSVTLDSPLVKAIAGHLPVVEVLRSPTTRYILIRLADHVTRAELEAFSPSFETMLSAEGREVAGGAMLTVRAEGEYDFFSRFFNPWGSVNEDPVCGAAHTVMAPYWSQVLGKDTLCARQVSRRGGNLAIRVCDGRMVVSGRARLIMKGSLLL* # PASA_UPDATE: g9456.t1, single gene model update, valid-1, status:[pasa:asmbl_3708,status:3], valid-1 NODE_2184_length_7373_cov_41.205 . gene 6013 6862 . - . ID=g9456;Name=g9456.t1 NODE_2184_length_7373_cov_41.205 . mRNA 6013 6862 . - . ID=g9456.t1;Parent=g9456;Name=g9456.t1 NODE_2184_length_7373_cov_41.205 . five_prime_UTR 6769 6862 . - . ID=g9456.t1.utr5p1;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . exon 6717 6862 . - . ID=g9456.t1.exon1;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . CDS 6717 6768 . - 0 ID=cds.g9456.t1;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . exon 6435 6569 . - . ID=g9456.t1.exon2;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . CDS 6435 6569 . - 2 ID=cds.g9456.t1;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . exon 6013 6263 . - . ID=g9456.t1.exon3;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . CDS 6031 6263 . - 2 ID=cds.g9456.t1;Parent=g9456.t1 NODE_2184_length_7373_cov_41.205 . three_prime_UTR 6013 6030 . - . ID=g9456.t1.utr3p1;Parent=g9456.t1 #PROT g9456.t1 g9456 MTKRGHKAPKKGKKEHTDTDATNGVKLNGGSKTADGASRAPRAQVVRTRTFDKAVNAAVTSEGASADTADQAKRPAESVADNTKDTKAAADDSATHEDKSADEKARPSGKWSLLGYVGVAAAVAIVAVLVIRRGHLVRK* # ORIGINAL: g9455.t1 original gene structure, not modified by PASA NODE_2184_length_7373_cov_41.205 AUGUSTUS gene 3121 5750 . + . ID=g9455;Name=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS mRNA 3121 5750 . + . ID=g9455.t1;Parent=g9455;Name=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 3121 3399 . + . ID=g9455.t1.exon1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 3121 3399 . + 0 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 3513 3645 . + . ID=g9455.t1.exon2;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 3513 3645 . + 0 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 3736 3842 . + . ID=g9455.t1.exon3;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 3736 3842 . + 2 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 3986 4177 . + . ID=g9455.t1.exon4;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 3986 4177 . + 0 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 4394 4664 . + . ID=g9455.t1.exon5;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 4394 4664 . + 0 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 4835 4941 . + . ID=g9455.t1.exon6;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 4835 4941 . + 2 ID=cds.g9455.t1;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS exon 5097 5750 . + . ID=g9455.t1.exon7;Parent=g9455.t1 NODE_2184_length_7373_cov_41.205 AUGUSTUS CDS 5097 5750 . + 0 ID=cds.g9455.t1;Parent=g9455.t1 #PROT g9455.t1 g9455 MRFGKQLLSRIYAPWSSHYFDYKGAKKRIKRINIAAGLMQPKGKMIVGSVEDEKELFKNYMFAQLFRISDFYKQKEIEAVSRYAEVAEDARQMLLAPLYDDMDMQPVNALYDIFEDLQRLDEYGRLNYMAFLKILKKYDKNTSSKLKDEVLPHLVRQPFYISQALPALLEDAHRLTSALADRYPAARRRQSLAMNNSILLRYATKAFSISLNRQILYLTIAFVVEVALIRFFGHEVQASGCDVTRFMHSFRHHIFDEISDFIHNVITSQAWALLSAIVFWAVNSNTGANLYSFVIVGFAIKSLAKNIIRSPRCFWLCDTYRAFYCGKGYSLPSGHSMVSLSALGFATLKFRRPWMFAVTILYEIVVLLNVQYIGTHTLMDVVVGWTCAALLLALFRLGERRLYAAYLVHRKRPSMAVQAAIVTLMTLCTLALDFYVEAYRPVLPDSYQASMERVCGFAPGAGGHRMYLRMYFSNTPLVFGVGVGYLLMKRLGRDVQDSLSQVERLFLAAFCGMVFLMLPAWIKVTVAALGGPLKYGFYHLYNFLSPIWVLYVGPAMFMAGRRMLYGSLQMNPIVPAKKID* # PASA_UPDATE: g9453.t1, single gene model update, valid-1, status:[pasa:asmbl_3706,status:12], valid-1 NODE_2184_length_7373_cov_41.205 . gene 239 584 . + . ID=g9453;Name=g9453.t1 NODE_2184_length_7373_cov_41.205 . mRNA 239 584 . + . ID=g9453.t1;Parent=g9453;Name=g9453.t1 NODE_2184_length_7373_cov_41.205 . exon 239 584 . + . ID=g9453.t1.exon1;Parent=g9453.t1 NODE_2184_length_7373_cov_41.205 . CDS 239 584 . + 0 ID=cds.g9453.t1;Parent=g9453.t1;5_prime_partial=true;3_prime_partial=true #PROT g9453.t1 g9453 ATMSYASTRGSPPAARRAPFASALLRRRPQSQHRSLAEHPGRPLRPPPLCEPTGVPLSYAAFAACFEIVLKTVIRLSAFLSFAFVFCPICQLSLLLLHCCNVLVQISWDRMRCKY # ORIGINAL: g7229.t1 original gene structure, not modified by PASA NODE_2317_length_6754_cov_39.5854 AUGUSTUS gene 115 3703 . - . ID=g7229;Name=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS mRNA 115 3703 . - . ID=g7229.t1;Parent=g7229;Name=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 3243 3703 . - . ID=g7229.t1.exon1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 3243 3703 . - 0 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 2868 2984 . - . ID=g7229.t1.exon2;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 2868 2984 . - 1 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 2511 2581 . - . ID=g7229.t1.exon3;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 2511 2581 . - 1 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 2296 2345 . - . ID=g7229.t1.exon4;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 2296 2345 . - 2 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 2055 2135 . - . ID=g7229.t1.exon5;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 2055 2135 . - 0 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 1855 1923 . - . ID=g7229.t1.exon6;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 1855 1923 . - 0 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 1609 1664 . - . ID=g7229.t1.exon7;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 1609 1664 . - 0 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 946 1297 . - . ID=g7229.t1.exon8;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 946 1297 . - 1 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 381 744 . - . ID=g7229.t1.exon9;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 381 744 . - 0 ID=cds.g7229.t1;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 115 170 . - . ID=g7229.t1.exon10;Parent=g7229.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 115 170 . - 2 ID=cds.g7229.t1;Parent=g7229.t1 #PROT g7229.t1 g7229 MGHKRSSAVLSASAMIIAFFLLSAFSAVDARPRPFPSIVIRPPATSSQAKAPTAAPRSSTPSSSVHASVHAASSSAIPAAAIQSGPAAVTSKAVAPSPSVAAARPSATSSKAIAPAASSLFVSLSMNNAPLVAGKRPVTGKWMPDTNTRAMWFWGKWPEIAELAVQDGLFSVIAAPHDVARFAINRFYFEFGRANLQTDAVNIRAFLRRAHALGIAVEYLDGNPIWLIPANNQIPVDICSEVAKFNAGGKGPEEWIDGIHFDIEPHVNRGQGLWRGFNTAAGKDQYNDALESAYVSIMKNCRAVLNAAGGRITLAADVGDDYAQQVTDLWQPLMANRYLDYIGIMNYYDTLDRFLFGVKGIGGMYNVLARSPVPVVFGAETIQPGSAPDANSFWQEGYLSLEWVLAQATAQANNPLFAGVAVHHFASASIMQAGTLPAGMNPALMGSGDITCMLDGQLYYDYSTKTVREAVQQASEVRMSRATTGNLVVTGLPLYVGCAMRSDTYKATRATISGSAAAVSLTGVPRGVYLELYNTYNGPTDCSGYMGSVCLPPEAITR* # ORIGINAL: g7230.t1 original gene structure, not modified by PASA NODE_2317_length_6754_cov_39.5854 AUGUSTUS gene 5235 5912 . + . ID=g7230;Name=g7230.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS mRNA 5235 5912 . + . ID=g7230.t1;Parent=g7230;Name=g7230.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS exon 5235 5912 . + . ID=g7230.t1.exon1;Parent=g7230.t1 NODE_2317_length_6754_cov_39.5854 AUGUSTUS CDS 5235 5912 . + 0 ID=cds.g7230.t1;Parent=g7230.t1 #PROT g7230.t1 g7230 MASTRFGVCSVLRMLNGSRSAFRLQSARPGLSSRHVAALLWSRHVQLAARRVLPVRDAPFRLYCPPSFNPAKSVSATCTPTLSDHGEGSWSLHDASRPVSLDHESDDSSVAQQLSGTAKGPEAAVISALALNDAAIAAVTKDIDKVVAAIKKVEVSLLQFGNSPDDIAYLRKKESDLRQKKAQLRKKEAQLRQETIQLVVKENKLRDQQTSRLNNPVLSTPFAYV* # PASA_UPDATE: g8826.t1, single gene model update, valid-1, status:[pasa:asmbl_4091,status:12], valid-1 NODE_2342_length_6642_cov_37.4861 . gene 43 6642 . + . ID=g8826;Name=g8826.t1 NODE_2342_length_6642_cov_37.4861 . mRNA 43 6642 . + . ID=g8826.t1;Parent=g8826;Name=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 43 396 . + . ID=g8826.t1.exon1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 43 396 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 608 846 . + . ID=g8826.t1.exon2;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 608 846 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 1046 1195 . + . ID=g8826.t1.exon3;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 1046 1195 . + 1 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 1567 1660 . + . ID=g8826.t1.exon4;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 1567 1660 . + 1 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 2003 2321 . + . ID=g8826.t1.exon5;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 2003 2321 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 3277 3491 . + . ID=g8826.t1.exon6;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 3277 3491 . + 2 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 3740 3946 . + . ID=g8826.t1.exon7;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 3740 3946 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 4245 4420 . + . ID=g8826.t1.exon8;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 4245 4420 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 4662 4722 . + . ID=g8826.t1.exon9;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 4662 4722 . + 1 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 4992 5138 . + . ID=g8826.t1.exon10;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 4992 5138 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 5341 5816 . + . ID=g8826.t1.exon11;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 5341 5816 . + 0 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . exon 6271 6642 . + . ID=g8826.t1.exon12;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . CDS 6271 6439 . + 1 ID=cds.g8826.t1;Parent=g8826.t1 NODE_2342_length_6642_cov_37.4861 . three_prime_UTR 6440 6642 . + . ID=g8826.t1.utr3p1;Parent=g8826.t1 #PROT g8826.t1 g8826 MIAVDMINEDLDTLPGMRLELERRFDQCSTSLATTETLALLQDPTTIGVVGPMCGGSPAKQAAILGNVFQRPIVSYAASTDELSQKLVYPFFLRTFPSSNLNQLGYLTVAREMGWTRVALLATQESFFNPVFYERAAAWGIKIDADLRLPTVTDYAPLLQVLKTRKMRVFITIMTGKVFQRLCTAAAQMDLAGPGKVWLMSQTGYEDCVSTLSTSGSKDLALKYAGSFVAEKLFDDGDPNLRKRYVERFNAKSMVEFDPRFNPTKLAPLALKQAPTFDSVYAFALAYRKLVIEKNLTFDGPALLAELQALNFYGVSGVVNFDTNGDRVMPVTFYNIRANWSDSSVSFSTPTVLRVHFNQTLDVTAVDYVSAIIFPGNVTGSPPVACLSSGSSSSTTAVAIAVPLALTVAFAAAIGLWVHRRHKAKSKETQTEFLAKHVASRTGLAALELGRDSVEVQDALGSGEFGVVYKARVILDGRPRMCAAKALKEGTSYNDRVEFIKEAEVMRGLVHPHIVTLCGIVTREEPMLILLEFVPHGDLKSFVRDISPQHRTSKLTLSMCFNFARQIAVGMEYLASMGIVHRHAGDLAARNALVGQDAFGEYLIKISDFGMSKDIGGNGSSYYRKKGSANNKIPLRWTPPDAVRTHKFGEKSDVWSFGVVVFEIYSFGEVPFAHIANKDVFAYVTAGNRLDRPAACPDPMYSLMMTCWLSNSEARPTFSELVRSLGRMATQDERERRLTVSASNAPPSFLASETTNEPTEKRMSLVNCSASGDGASPRLRARSIGNNYLPLDLIIDSGPSSSEPPLLPLSEHPYLNTNSDVDYNAGFIHLCGPFVLVAQDESTAFHLFSSLMSALKPRFVPSNINKVG* # ORIGINAL: g4736.t1 original gene structure, not modified by PASA NODE_3947_length_2476_cov_34.354 AUGUSTUS gene 41 2407 . - . ID=g4736;Name=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS mRNA 41 2407 . - . ID=g4736.t1;Parent=g4736;Name=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS exon 2315 2407 . - . ID=g4736.t1.exon1;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS CDS 2315 2407 . - 0 ID=cds.g4736.t1;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS exon 987 2108 . - . ID=g4736.t1.exon2;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS CDS 987 2108 . - 0 ID=cds.g4736.t1;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS exon 659 724 . - . ID=g4736.t1.exon3;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS CDS 659 724 . - 0 ID=cds.g4736.t1;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS exon 453 494 . - . ID=g4736.t1.exon4;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS CDS 453 494 . - 0 ID=cds.g4736.t1;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS exon 41 116 . - . ID=g4736.t1.exon5;Parent=g4736.t1 NODE_3947_length_2476_cov_34.354 AUGUSTUS CDS 41 116 . - 0 ID=cds.g4736.t1;Parent=g4736.t1 #PROT g4736.t1 g4736 MNIPEEARKPMRMRPLEQRKMLVMQHRQKEEESAKNADIHSPEYLINQLKGGKLAPNKQLKVLNTVRVSLTSQPMSWVCNFRDLNGLDVLLMILSKIDFKSKDEKLEQGTAQECVRCLKAFMNNKHGLTAVLRKPDTLFMMAKTLSPHDAKISTDVLELMGAVCFVPPDGHRIVVGALTILSNSRREEFRFKKLLDILKAAIAEDNLHLMLACVQFVNAVVNSPEDLDFRLHLRNEFVLLGLLDILGELRQMDNEALNIQLEVFEEETSGDYSELLERYDLEQLEMTDAGEIFTLLRNLVSGTAAEPHFLSILQHMMLIRDDHTVRPQYFRLINEAVTQIILQRQGIDPDFQGHFTMDVDPLLQHFIDDEMILSATGKVGEMQRELDIANKIRLEMEARLTKDVQEKEDRIRDLQAQVDAMRMGGAVLPGGIPPPPGAEGGIPPPPGAGPPPPPPPPGGIPPPPME # ORIGINAL: g14424.t1 original gene structure, not modified by PASA NODE_1931_length_8479_cov_45.0275 AUGUSTUS gene 6295 7810 . + . ID=g14424;Name=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS mRNA 6295 7810 . + . ID=g14424.t1;Parent=g14424;Name=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 6295 6351 . + . ID=g14424.t1.exon1;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 6295 6351 . + 0 ID=cds.g14424.t1;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 6702 6865 . + . ID=g14424.t1.exon2;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 6702 6865 . + 0 ID=cds.g14424.t1;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 7080 7209 . + . ID=g14424.t1.exon3;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 7080 7209 . + 1 ID=cds.g14424.t1;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 7527 7606 . + . ID=g14424.t1.exon4;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 7527 7606 . + 0 ID=cds.g14424.t1;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 7786 7810 . + . ID=g14424.t1.exon5;Parent=g14424.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 7786 7810 . + 1 ID=cds.g14424.t1;Parent=g14424.t1 #PROT g14424.t1 g14424 MAAKVVTLPRRNRPGTKSDQLDSWRDVDLADMETVLAVQQYIRQTIKRDRKNLAAILELPEGQDSDLWQYEHLRQFCFELNHLIVSLQDACTALSCPQMKATDEWLYLCAAHKQPQECSAIDYAVHTLDGTSALLNSNKYFPSSSKQHGLN* # ORIGINAL: g14423.t1 original gene structure, not modified by PASA NODE_1931_length_8479_cov_45.0275 AUGUSTUS gene 2195 4458 . - . ID=g14423;Name=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS mRNA 2195 4458 . - . ID=g14423.t1;Parent=g14423;Name=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 4306 4458 . - . ID=g14423.t1.exon1;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 4306 4458 . - 0 ID=cds.g14423.t1;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 3666 3929 . - . ID=g14423.t1.exon2;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 3666 3929 . - 0 ID=cds.g14423.t1;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 3011 3179 . - . ID=g14423.t1.exon3;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 3011 3179 . - 0 ID=cds.g14423.t1;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 2459 2690 . - . ID=g14423.t1.exon4;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 2459 2690 . - 2 ID=cds.g14423.t1;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS exon 2195 2357 . - . ID=g14423.t1.exon5;Parent=g14423.t1 NODE_1931_length_8479_cov_45.0275 AUGUSTUS CDS 2195 2357 . - 1 ID=cds.g14423.t1;Parent=g14423.t1 #PROT g14423.t1 g14423 MRASLRYPASAPPSSHGLCVAALVASVCKIVFLANLAHAGESHAARAVIRSPSPCILADVRGNVIAAPSADPSAAGAFSCSTLQGGFNDEGFIVCTGRYLIDPTAIGSSDGVTLAYKLGATLDTADYMVAQVSGKGDIKVVLSTDDAGANAVATLIPSTSVVGDTALNGKIIVGSVALESISCRNTVEPYFLGKLRRCPTGLFSPNTVLGPGSVAFTGFNADGNDDLAFVVIDDIPVGTEIFFDENEWNGTSFNTGEALCKVTVSEKPVRELSGALDAADETVYSYIKKDGKFVFLAAVANGGYSTTTGSSPALALWLASLPWTCP* # PASA_UPDATE: g14422.t1, single gene model update, valid-1, status:[pasa:asmbl_3043,status:12],[pasa:asmbl_3044,status:12], valid-1 NODE_1931_length_8479_cov_45.0275 . gene 179 596 . - . ID=g14422;Name=g14422.t1 NODE_1931_length_8479_cov_45.0275 . mRNA 179 596 . - . ID=g14422.t1;Parent=g14422;Name=g14422.t1 NODE_1931_length_8479_cov_45.0275 . five_prime_UTR 442 596 . - . ID=g14422.t1.utr5p1;Parent=g14422.t1 NODE_1931_length_8479_cov_45.0275 . exon 371 596 . - . ID=g14422.t1.exon1;Parent=g14422.t1 NODE_1931_length_8479_cov_45.0275 . CDS 371 441 . - 0 ID=cds.g14422.t1;Parent=g14422.t1 NODE_1931_length_8479_cov_45.0275 . exon 179 267 . - . ID=g14422.t1.exon2;Parent=g14422.t1 NODE_1931_length_8479_cov_45.0275 . CDS 179 267 . - 1 ID=cds.g14422.t1;Parent=g14422.t1;3_prime_partial=true #PROT g14422.t1 g14422 MSRMPESEDEAVRGTNDDAAQCKLSAVALGYWDDPHLKSFVKRAERRQPLINR # ORIGINAL: g8430.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 219 1013 . - . ID=g8430;Name=g8430.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 219 1013 . - . ID=g8430.t1;Parent=g8430;Name=g8430.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 219 1013 . - . ID=g8430.t1.exon1;Parent=g8430.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 219 1013 . - 0 ID=cds.g8430.t1;Parent=g8430.t1 #PROT g8430.t1 g8430 MPTTPTEWLWHVAERADATIQYEIGRCYTEGRGVEVDETVAFRWYLKASFRNLPDVEYTLAKCFLTGRGVQQNDSDGFLYMLSAAKKGHPEAIIETEMNYRLGRYVEKDDEEADEWLAKCAAQEAISPTITGASTMTIDDWLRIAMERANPDIQAEYALSVLEEGGADAHEQAFGWFHIAAVRQCSRAAYYVGKSFADGLGVDHDAAEAVRWFALATDIPEAALEMGKCYESGSGVRQNNTTALEWFCRAAEQGTDRRATTVQD* # ORIGINAL: g8435.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 9186 9683 . - . ID=g8435;Name=g8435.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 9186 9683 . - . ID=g8435.t1;Parent=g8435;Name=g8435.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 9186 9683 . - . ID=g8435.t1.exon1;Parent=g8435.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 9186 9683 . - 0 ID=cds.g8435.t1;Parent=g8435.t1 #PROT g8435.t1 g8435 MSCGDKLSCGDKLSCGGGTLLGDIKAATAMNDKKRFEIVNRNGKEYIRAVQGHNTALAQLINEDELLERMTNPVEKCIHGTDHKAIALIMSEGGLKPMSRMHVHFAQSEEASSGIRKNAPVLIYLDMSRALSDGIPFFMSKNGVILSPGNADGIIPVRYFKVVHA* # ORIGINAL: g8437.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 11686 12816 . + . ID=g8437;Name=g8437.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 11686 12816 . + . ID=g8437.t1;Parent=g8437;Name=g8437.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 11686 12816 . + . ID=g8437.t1.exon1;Parent=g8437.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 11686 12816 . + 0 ID=cds.g8437.t1;Parent=g8437.t1 #PROT g8437.t1 g8437 MRCDILVGLQYGDEGKGKVVASLLQTAPYILGIRYNGGPNAGHTIYVDGTKIVLHQLPSIVIKENAFALIGSGCVVDIDKLSAEIDYVENALGRSNLRSFIKLSSAAHVILPEHICRDKQTDTVGTTGCGIGPAYVDKIGRVGIRAETLGNTAAGCEIVDCLDFVEQLEKLHPSGKALLEGAQGFYLDVDLGNYPYVTSSNITPNAALNCGITIRDVDNIFGVAKLYETYVGKMQFQPENEDADWFKHIQIAGKEFGATTGRTRQCNWLNMDALVRACKVCAVSDVVINKCDIVQTVGKYAYVEGGKKVEFANVKEMIDSIEQKLIDKCKTVKTVTFSYSPLSVSPLTTSILPLATSILPFATSILPLATSILPHH* # ORIGINAL: g8436.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 10182 10790 . + . ID=g8436;Name=g8436.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 10182 10790 . + . ID=g8436.t1;Parent=g8436;Name=g8436.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 10182 10790 . + . ID=g8436.t1.exon1;Parent=g8436.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 10182 10790 . + 0 ID=cds.g8436.t1;Parent=g8436.t1 #PROT g8436.t1 g8436 MNGLSKVPAGTAYLEVIIGPMFASKSTTLINTFRKYKCIGKSCMVITHVSDERYLVNAVATHDLVTLAAKPVANLTGAVDSAEYVASIAILVEEAQFFPDLLEFVDRALSDGKHIYVYGLSGDYLQRPFGKILELVPKADRIVHLTAFCKICADGTPAPFTKRIVNNSDDILIGKDDAYMPTCRNHSAYPPRTTGLNDSGRL* # ORIGINAL: g8434.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 8761 9087 . - . ID=g8434;Name=g8434.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 8761 9087 . - . ID=g8434.t1;Parent=g8434;Name=g8434.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 8761 9087 . - . ID=g8434.t1.exon1;Parent=g8434.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 8761 9087 . - 0 ID=cds.g8434.t1;Parent=g8434.t1 #PROT g8434.t1 g8434 MYVVINSTLQMGKGKLAGQVGHAVSAAIRYLEHNPTPAYKRWLAVGEAKIVVKADQEGIDQLNKSDVKHFAIYDMGKTQIAPNSLTAIAFLPARTECTPVQLTQLKLA* # ORIGINAL: g8433.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 7290 8399 . + . ID=g8433;Name=g8433.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 7290 8399 . + . ID=g8433.t1;Parent=g8433;Name=g8433.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 7290 8399 . + . ID=g8433.t1.exon1;Parent=g8433.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 7290 8399 . + 0 ID=cds.g8433.t1;Parent=g8433.t1 #PROT g8433.t1 g8433 MNCRAEFTRAFLIETLGVTFVNGTQTKHAKELLLSREKELLQSTQPHVDWERTRRKEMDKARFGVKPVIPPAPTVSKSRQGATVEVFPCPSNGCRGFATRGSCGVCHVPVCMMCRELTKAGHVCNPESLKSVEKIREDSRPCPRCNVFIFRSYGCNHMFCTHCQTHFDWETNRILSSSTNHHYVNVARFSENVAVRPDAPNASEDDEDCDGPFAIFHDRVKLESLPNISPELKLTLFDDVKVIRFTKQKMFDEQKLVTDLQTGLLKIRVQYMMGELTENVWINRVYTMEKQTDRDLHYSQLLTLYLQFVNTCQRKLARSCSDMEQTLNELSKFIDMCNESFATLHNEYGGTLMQLRTDFTKPELPPLSL* # ORIGINAL: g8432.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 4815 5639 . + . ID=g8432;Name=g8432.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 4815 5639 . + . ID=g8432.t1;Parent=g8432;Name=g8432.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 4815 5639 . + . ID=g8432.t1.exon1;Parent=g8432.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 4815 5639 . + 0 ID=cds.g8432.t1;Parent=g8432.t1 #PROT g8432.t1 g8432 MYEGLIKDVLDNGELRETRNGKTISLFGRTIEYDLAAGFPLVTTKKVFWRGVVEELLWFLSGNTSAADLSSRGVNIWNSNATREYLDGRGLDYSEGELGPIYSWQWRRFGATFPAGTDGVDQISQLIEGIKSDPYGRRHLVSAWNPVDLPKMALPPCHVLFQFYVGGNTLSCQMYQRSCDVGLGLPFNIASYAALTHMVASVCNLTPGRLIIALGDTHVYEEHVDVLKQQLLLEPRKFPRLELAHKDSIFDYKWEDFKLLDYHPHVWDARMNVK* # ORIGINAL: g8431.t1 original gene structure, not modified by PASA NODE_1232_length_12855_cov_61.2287 AUGUSTUS gene 3812 4618 . - . ID=g8431;Name=g8431.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS mRNA 3812 4618 . - . ID=g8431.t1;Parent=g8431;Name=g8431.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS exon 3812 4618 . - . ID=g8431.t1.exon1;Parent=g8431.t1 NODE_1232_length_12855_cov_61.2287 AUGUSTUS CDS 3812 4618 . - 0 ID=cds.g8431.t1;Parent=g8431.t1 #PROT g8431.t1 g8431 MDEEFIECSVSKIVEIAGDQFKIMQCDNGFWISACHLAAIAYTEAWDTNSSETITVVLNDRLIVGDVPPPNDDLLVAGKIVYGEANAIYLQLADGRLYFEDDITLQEIYARYEYLLDEEDIAKVQRVCNPDGHYVITIEQIDDMVFRLNLSNGENLVMNLIDIMADSRYSSNLYASKTVRRTILYCWNKHLRPNSYGDVVEAKLGDMCWKNSSSCYHDVFILRDDGSVSCQHLDENRILQIYGPNLPIADLTHFGYGSVWNALRSFWR* # PASA_UPDATE: g5264.t1, single gene model update, valid-1, status:[pasa:asmbl_4287,status:12], valid-1 NODE_2428_length_6318_cov_43.2057 . gene 384 2243 . - . ID=g5264;Name=g5264.t1 NODE_2428_length_6318_cov_43.2057 . mRNA 384 2243 . - . ID=g5264.t1;Parent=g5264;Name=g5264.t1 NODE_2428_length_6318_cov_43.2057 . five_prime_UTR 2220 2243 . - . ID=g5264.t1.utr5p1;Parent=g5264.t1 NODE_2428_length_6318_cov_43.2057 . exon 384 2243 . - . ID=g5264.t1.exon1;Parent=g5264.t1 NODE_2428_length_6318_cov_43.2057 . CDS 384 2219 . - 0 ID=cds.g5264.t1;Parent=g5264.t1 #PROT g5264.t1 g5264 MSIAPQASFCFSDSTLTFMDLGFGQVTPPSTQIDSDAYCEVDPFDVPTTTCTYKQLCALPADEHSQPQDPQGSSSFDHGLLTHDDGSSPASALGSATSAMGIHADDRTHMYDTPRRSISPAEVNPEAARRSASERVFAQSSTCDTSTPSTQYHSPSHPWQDEDQHSCPDDDDEATEEASASNSQDMPGDRDHVTDGEDDATCTDSMYSDLDKAKTKTAKETVEATSSSTPSRITCTLPRSAALVPGIEFDFGSGDVIFVPNSPVQKRTLRPRSKGTSPPAPASLVAAATVTPTAASSCQSPVQSPKWSFPIAPRGMWMPVADTTPATPGVFESPTLDAMTALVDAGCSRSLHGVPTVKGGRGVRKAKKTKAKANANAKAKGKAKANTATSKGKSKQRKTRVPRRTQDVTCASVGASHATTLDVIDAVMAILHTNQTLDSAKSTSTAMECAGPSTAEVTASDESGDTTSDSECLHDTLSHAPHAPIATNASTSAVTPPHTAGRQKNRKQRTPGQPAVGRCRARACLGCPLVFPTARARSMHELRAVRKAARDGRLANYTWLEYRTEEKRLGRNAHDWMIGLEPRKKRSASAHEGAAARAAHCRIDTTQGSDA* # ORIGINAL: g5265.t1 original gene structure, not modified by PASA NODE_2428_length_6318_cov_43.2057 AUGUSTUS gene 3567 5529 . - . ID=g5265;Name=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS mRNA 3567 5529 . - . ID=g5265.t1;Parent=g5265;Name=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 5311 5529 . - . ID=g5265.t1.exon1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 5311 5529 . - 0 ID=cds.g5265.t1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 5133 5196 . - . ID=g5265.t1.exon2;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 5133 5196 . - 0 ID=cds.g5265.t1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 4907 5013 . - . ID=g5265.t1.exon3;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 4907 5013 . - 2 ID=cds.g5265.t1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 4081 4818 . - . ID=g5265.t1.exon4;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 4081 4818 . - 0 ID=cds.g5265.t1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 3833 3893 . - . ID=g5265.t1.exon5;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 3833 3893 . - 0 ID=cds.g5265.t1;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS exon 3567 3724 . - . ID=g5265.t1.exon6;Parent=g5265.t1 NODE_2428_length_6318_cov_43.2057 AUGUSTUS CDS 3567 3724 . - 2 ID=cds.g5265.t1;Parent=g5265.t1 #PROT g5265.t1 g5265 MGGQSQARPHAAVATAGSLPNSDPGYGASAGGPHSASSQDGGLAEVMRTRVQLKEQRAVLDAVGSDVKALVVQFESLQRSTVPQVDTAQLLADLVDKATANICEAVARRVDTLECKLSDHAREMAAAGLKMGAMQSHDLLMGLAASNVTHNSALEMLRDKVQEVAALVEKGNRDGLQAERNMALRLDVDRALRQTAESMRASAQLQRDACARVMDGLKKLTEEVEEEEEAHDDLNKAQRRTAPRKHCCTTGRTAPTIAAPQQPQPTHAVIAAKAPAPLLPERQLRRTTRSSTRDSASRDNTIPALNGSEAGACHSAPQVLAMPPPAERVGVPMPRHKRKTSFDALMVECIEGVPVPAKRTRACTGVRTDMKGAVAKGGARKRKITIVARAVNAASDATSQTHDVSNEVEQRIAEIQRSIITAKRAARATGGTAVKTEPSPPAVDMDTD* # PASA_UPDATE: g14299.t1, single gene model update, valid-1, status:[pasa:asmbl_5580,status:12],[pasa:asmbl_5581,status:12], valid-1 NODE_3111_length_4271_cov_36.5193 . gene 114 4053 . + . ID=g14299;Name=g14299.t1 NODE_3111_length_4271_cov_36.5193 . mRNA 114 4053 . + . ID=g14299.t1;Parent=g14299;Name=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 114 603 . + . ID=g14299.t1.exon1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 114 603 . + 0 ID=cds.g14299.t1;Parent=g14299.t1;5_prime_partial=true NODE_3111_length_4271_cov_36.5193 . exon 1119 1234 . + . ID=g14299.t1.exon2;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 1119 1234 . + 2 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 1679 1860 . + . ID=g14299.t1.exon3;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 1679 1860 . + 0 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 2063 2308 . + . ID=g14299.t1.exon4;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 2063 2308 . + 1 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 2739 2929 . + . ID=g14299.t1.exon5;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 2739 2929 . + 1 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 3128 3179 . + . ID=g14299.t1.exon6;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 3128 3179 . + 2 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 3385 3544 . + . ID=g14299.t1.exon7;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 3385 3544 . + 1 ID=cds.g14299.t1;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . exon 3907 4053 . + . ID=g14299.t1.exon8;Parent=g14299.t1 NODE_3111_length_4271_cov_36.5193 . CDS 3907 4053 . + 0 ID=cds.g14299.t1;Parent=g14299.t1 #PROT g14299.t1 g14299 ILEGFVIGHLDTVDEIIRDSQEDPLEDPDALHVTLEPLGVIGRSAFEKTFMTLANLFDPIARAHVEAISTMGGADPRRVAVLESQLAWLVYIIATVVGHAPPLSGRGAGEPTFDMLDGQLCVRVLRVVQAVDAARGQTRPLSDRLEGAFIYFLDNFRKAYVIGGEQPQKATEVYGPLGEALGISDQAIMLEVIVRKILANLKVWGADDRILGPTLRLLDELSGGFTTSRMLAKLETVRFLLMNHDASQYPFLDVNPNGLNRSSYYTSLTRLLVLDVNDEDERLEDFMRPFCRRLDVVTEELGGRVLDSFNAPVVGRTVVGVARDLRGIAHALTRKSSFNMFFEILYPPYTPIMSQALELWYSDPGVSISVLRLVEELVQNRNNRLNFDVSSPNAFLLFREASKVIVTYGQRVITLTPPPDLIYQQKYKGIKLCFSILRHALAGNYVNFGVFRLYGDDALDVALRMFVEMLRVIPIDDILVYRKVALVYYPLIETLSTDHMHFIASLEPTVFQYVMASVSEGLCSFGA* # ORIGINAL: g8567.t1 original gene structure, not modified by PASA NODE_839_length_17054_cov_39.5252 AUGUSTUS gene 36 885 . + . ID=g8567;Name=g8567.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS mRNA 36 885 . + . ID=g8567.t1;Parent=g8567;Name=g8567.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 36 470 . + . ID=g8567.t1.exon1;Parent=g8567.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 36 470 . + 0 ID=cds.g8567.t1;Parent=g8567.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 715 885 . + . ID=g8567.t1.exon2;Parent=g8567.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 715 885 . + 0 ID=cds.g8567.t1;Parent=g8567.t1 #PROT g8567.t1 g8567 MESNGKSVTRDGSATQTSTGPIVWGEPGTNGQHAFYQLIHQGTKIIPTDFIAPVHTQNPIAGGIHHEILLANYFAQTEALMRGKTAEEARAELTKEGLSGERLESLLPHKVFAGNKPSNSIFFQRLTPRTLGALVALYEHKIFTQGVIWNINSFDQWGVELGKQLAKAIQAELKGDSAVVTHDASTNGLINFFKTHRAGKL* # ORIGINAL: g8571.t1 original gene structure, not modified by PASA NODE_839_length_17054_cov_39.5252 AUGUSTUS gene 12158 16819 . + . ID=g8571;Name=g8571.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS mRNA 12158 16819 . + . ID=g8571.t1;Parent=g8571;Name=g8571.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 12158 16819 . + . ID=g8571.t1.exon1;Parent=g8571.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 12158 16819 . + 0 ID=cds.g8571.t1;Parent=g8571.t1 #PROT g8571.t1 g8571 MDPPDPSHHEAAFHLCSLSEIGYAPMVPQSVQQQHQQHQQQQQQQQQQQQQQQHEEDQQQHQVLFQQQQPLQHLQSPSLAISHASLPPLSLGQPGTIRNASWSGSTPQVAEGPFSGDGVGFGEDGTGVGFSAGAEACVGTQAWAGPVEGLSGQYAPSAYSGAQILPRHQQQQQLQQQQHQQQQHEQHQHDLQQLHQQQLHQQQQQHQQQEEQQQHEQQQLELQQMQFQLQLRAQTPLQSMQTSSFNPQVQSFQQPHHHFHQQHHVVQVHPPAHPQPQPQASQQQQFHQVSDQQQKLWASHLQMPMQHQPQQQHQHMQMQQQQQHQKHKQQQQHQQHQPPPQQPDGRNQKQPISFRPTVNPDTIKAMYALIAKNQRAAAGGQTGAQSGRAPGKGNVNGTITTDSGLFGVPGAGGSAGGRYTGPIQSNAGSDAGPAQGFDFIQQQQERQRQEQQMQQQQLQQQQWQQRTGQSAAQLPPAHLDELQRLRGPSHGLSQAQVMQHAQHTMLQSRSREIATEIPGEGTATGVEVGAARHTIAPGLGIPSQMQMQMPSGRTNKAAKSAANSHAPTWAALSSADTMPQFHSQMPQQRTATVRPTNASNMPPQLGFTPLAGSNAQSLALSGEYMSQQSQKRLVGAVGGLEKSGTAGFPVFVANPSYVSNVGAPVVPAPASIQQKKKRVRKPAVKKTGAVDQGGDAGGDMAGGMNGVVTAMPNAPPDGNNAAMPLNSGAAMPLNGVGSGALSHLGALDVMAAPNQRPPRKRAPRPKKPANTPAVPVSATAMSTMRAPMTADMQLSSSSLYSMLSTGGGMDGYASGMQNVQTAQGMQGFGDRMFAASGVSRLESLSHGSGHLPFGQPGEFYYQPLISTDPNSDATTLGSSLGSGGFDARSRYDLPARAADHKATAGGFPRYVPLTQNEGNAAWQMTSAYNGAPIPIELFNGKILASEPGTFSAYARVSPGDVLEIRGHLASVEHDGTVECTCVSSDLTSMSAPVFSSADAWWAHAADGIPSAISIVTINGARISPLCLPSAAAVLPAQVEPPKPPRKRKPRPKKSDLAGNSLVANVADAGVAGNNMHVASIGVDGALEAATGGAAGAIGAIGADGMLVPPEKVKRKRIYKPRPRKKPKVEGDGAPDALAIVVPGDGTTSGAPQSAPVSAVEGAIQSVLSVEGVIAAVSDGTVDTAVNGDTGAAKKGAKRKPKEKRDRKKKGDARDEDADVKKGGASVAVGSTLADSAPSRTEAVGRTGGDRSRTVTVEGATVNVGSKKGSKAVKAGRITVAGALAHGVHGRVSDGLECPPPPIPEDYAWCPAVVPVVEANPACFKCAGTVAEGEQPLVCCQLCGEPYHRYCADLPADKAVPPNWRCMGCVLCDMCGKTNPIEQLVACDACGRGFHHKKCHVPTVTAPPDGAWRCYDCAVCVGCWTRDTTQWMFDFTHCLDCGRSKAAGRCCPVCHIGYPPERLGMKRATGPSGEMIQCADCSAWVHYNCCGLTDVQVEEFARNDAVPFRCPPCTDTYFQTMSQSKGFAALFGKGGGKEKFGGFTSVRWGVGVFC* # ORIGINAL: g8569.t1 original gene structure, not modified by PASA NODE_839_length_17054_cov_39.5252 AUGUSTUS gene 5419 7631 . - . ID=g8569;Name=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS mRNA 5419 7631 . - . ID=g8569.t1;Parent=g8569;Name=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 7590 7631 . - . ID=g8569.t1.exon1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 7590 7631 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 7413 7482 . - . ID=g8569.t1.exon2;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 7413 7482 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 7151 7212 . - . ID=g8569.t1.exon3;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 7151 7212 . - 2 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 6948 7052 . - . ID=g8569.t1.exon4;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 6948 7052 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 6430 6585 . - . ID=g8569.t1.exon5;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 6430 6585 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 6132 6221 . - . ID=g8569.t1.exon6;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 6132 6221 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 5419 5838 . - . ID=g8569.t1.exon7;Parent=g8569.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 5419 5838 . - 0 ID=cds.g8569.t1;Parent=g8569.t1 #PROT g8569.t1 g8569 MATATSALTAHPYEEHESKFKTLLAHHLSDVKDPHATYGKKATQDLICSLGLDVANKQVLELCCGDGSRACFIGKRYGHDITGIDTAGNTIDLAAENARRDGLADHVRFQETSAFHLPFADESFDVIYGQDPDVLSHVHRHQVFKECFRVLRPGGLFGFFHHWIPGVHFPKMALEAVESHTEQIGLASMHGANADRYLHDMKSVGFAVLSTDDMTELAAISMRTMANSLGKMGRDASPRHSALEAWVKKHLEFIDRGYHYGIKVLARKPMPGDVAPDAPWWALKSSTPGSFGYIVAGAVIAVAALSVVAARLRK* # ORIGINAL: g8568.t1 original gene structure, not modified by PASA NODE_839_length_17054_cov_39.5252 AUGUSTUS gene 2353 4812 . + . ID=g8568;Name=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS mRNA 2353 4812 . + . ID=g8568.t1;Parent=g8568;Name=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 2353 3134 . + . ID=g8568.t1.exon1;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 2353 3134 . + 0 ID=cds.g8568.t1;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 3305 3710 . + . ID=g8568.t1.exon2;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 3305 3710 . + 1 ID=cds.g8568.t1;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 3939 4037 . + . ID=g8568.t1.exon3;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 3939 4037 . + 0 ID=cds.g8568.t1;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 4297 4408 . + . ID=g8568.t1.exon4;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 4297 4408 . + 0 ID=cds.g8568.t1;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS exon 4709 4812 . + . ID=g8568.t1.exon5;Parent=g8568.t1 NODE_839_length_17054_cov_39.5252 AUGUSTUS CDS 4709 4812 . + 2 ID=cds.g8568.t1;Parent=g8568.t1 #PROT g8568.t1 g8568 MNELMPDVYADIASRLGSVPSSSIAHMLENNPVLSAFGAWASSRADESDAHVLPEVQDFTCDTMEALLSDKMRTRQPEDRRRTDSGGDGDESPFVSVMFEWDVFVSDNVASVWKLAQSNDDTRDADHLSCVESDERDECTAGHGGHRQIISLLVDRMLIAHGSMLQLVGEFGGFSQYSAVEASRPTQMGGVSASRWMDAFAKALEMIEDMEREACVHPAPVDDAVFARPPKGKYTCTTSRDKSALWGERVSSTSKLSSGRRSFEDAVEIFRRVTGIPEFSVVLDLKSGQVDPVLLTAIVAELNRRGVVVDAVGSFKIAQILGVRAAVQQRGGQRVRMRSLDKVTGGRRLSVVSRDAPRELWFFHFVSDVLYAASQRLIPRGASVLFNGGSVVGYRKVAFSEAKLRSYHIKEDSIERLRKAKEIHGFSVGIYVQEFDCDAKATAMINHVINREARLFDLGFAWGGLAGLVGSDIRPSIIDGTVGTAEQGLIARSREPLGFE* # PASA_UPDATE: g8570.t1, single gene model update, valid-1, status:[pasa:asmbl_9617,status:12],[pasa:asmbl_9618,status:12], valid-1 NODE_839_length_17054_cov_39.5252 . gene 8131 11437 . + . ID=g8570;Name=g8570.t1 NODE_839_length_17054_cov_39.5252 . mRNA 8131 11437 . + . ID=g8570.t1;Parent=g8570;Name=g8570.t1 NODE_839_length_17054_cov_39.5252 . exon 8131 8274 . + . ID=g8570.t1.exon1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . CDS 8131 8274 . + 0 ID=cds.g8570.t1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . exon 8410 9839 . + . ID=g8570.t1.exon2;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . CDS 8410 9839 . + 0 ID=cds.g8570.t1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . exon 9992 10241 . + . ID=g8570.t1.exon3;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . CDS 9992 10241 . + 1 ID=cds.g8570.t1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . exon 10473 10733 . + . ID=g8570.t1.exon4;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . CDS 10473 10733 . + 0 ID=cds.g8570.t1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . exon 10854 11437 . + . ID=g8570.t1.exon5;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . CDS 10854 11309 . + 0 ID=cds.g8570.t1;Parent=g8570.t1 NODE_839_length_17054_cov_39.5252 . three_prime_UTR 11310 11437 . + . ID=g8570.t1.utr3p1;Parent=g8570.t1 #PROT g8570.t1 g8570 MDIMDILKSLPDTCLNPEMPLPFEILGGEGKFPSDGLVPTFPEIRDELASLLDAPVDLYIKPICRDATVMALNAYGLQDVARIKEVIQRALAISDGLCPEAHNALAQMTSTSYADALAHYQRAAECSLKTFPTLDATIADEVGVFNVPPLRAYFRAVHGLANTHRKMGQFKEAFVHYRRLIEIEDSATALKIPSFPNYRYHVPAVFFANGDREGCLKYMKADPSFDDLEFAAAMLEHNGCDVPWSFALAFLLFERQRDVTQELVAEMGSDVGDEKIPDFSPEAAEVGRFMWEGLDESQTPIASAVFQASQYGWEHIIPHIRGSHGVELDILARVPRTLAGETTLEQAHCFVRTCGPILDAWRDTPGALRWLSLHCNTMWAYFGVLSQPGFRKPPTAPEDLFSVERFRACAEDGIYVSFPVSGGGMQMIHEVVIGERGGPEKMKILLELHKKLGASVETAHRLTPLHIACYYDREPELITALLDAGARFAGGEFLLGVSPLQMAINQGNWRPLKILMDRMPISSAQDRNGLKLVFAGLAQSPVYVCVLGRSVCERCVAEALRGGPRSFHSPGCVFEKCVDVLIEKGMEGVPTEIHESHPLVVYAKEKLKGNNPQPLGLPRPYTAIQISCMTRPQLVDLADMWSVDANTPEAGSTTPPTEEQIAKRILTALLRAGGLEAAVQRQKTLHQDIEAARTRMMQARMQQQGGGGGHGHSHDGKPCHGHGHGQGQGAPQQAHQGAGGHGHTHDGKPCHGHGHGQGQAPPPQQQQRGGGQGHGHTHDGKPCHGHGHPAAPPQHSQQSGHGHTHDGKPCHGHGQPASAAPQQLQQQQRGGGHGHSHDGKACHGHG* # ORIGINAL: g12789.t1 original gene structure, not modified by PASA NODE_1212_length_12979_cov_42.9374 . gene 3248 6095 . + . ID=g12789;Name=g12789.t1 NODE_1212_length_12979_cov_42.9374 . mRNA 3248 6095 . + . ID=g12789.t1;Parent=g12789;Name=g12789.t1 NODE_1212_length_12979_cov_42.9374 . exon 3248 4561 . + . ID=g12789.t1.exon1;Parent=g12789.t1 NODE_1212_length_12979_cov_42.9374 . CDS 3248 4561 . + 0 ID=cds.g12789.t1;Parent=g12789.t1 NODE_1212_length_12979_cov_42.9374 . exon 4749 6095 . + . ID=g12789.t1.exon2;Parent=g12789.t1 NODE_1212_length_12979_cov_42.9374 . CDS 4749 5945 . + 0 ID=cds.g12789.t1;Parent=g12789.t1 NODE_1212_length_12979_cov_42.9374 . three_prime_UTR 5946 6095 . + . ID=g12789.t1.utr3p1;Parent=g12789.t1 #PROT g12789.t1 g12789 MRVSLVVDAAKDLEDTEFQSTMHSHLPSTGRTTQFADTDIHKEPAHKRDGTPRKSIVSFMDGHALAKNSQEEGRLYDSREPRLANGSRADWVHRGFNGSQGVGRIGEGGTRNDEVPPGYIGDSGESADECPEVMADPRSSQVGIDLSFIPQPDEDGRAYTDVNVDCVGSETSPHGLFRLEGASIWHDQHSTPTSTSATKPEEPANDEDRKSETPSIRSGSSGGTSFTTSVYRARSTILSGGGRGLGWLTLLLRIALFATVACLIAIAAVGFTRIEKGALSLAQEIGDVTNAAQRRVRSHDMIDSVRLLTLIATNVSSQFDEETLRTRLHSAATEMDAIHKALYQNFAVMTADQKELYTVRSIPTIVPDPRGGKTTILYNLWDLINVIDAKAKQLCLMPLNSIQTGTPEVDFILDNTLSGVRFAFEHSMTFYEEEAGKKKNTLLDESWKVAVAGLAFISVITAAVLIPVFVLAEKRVTQTIELYFSVPKHVARKLQEGCQQRLLSREAFEDGYDGPDTASGAQVQKKEPVFSASKPVRRRERVVITWMQRVKLVCLNQRVGIAFVLALAATTIIYTSIDYEQTVRFVDDHGDSATLINWSSRRHYRARLLLYSARELAVCETTDACDNSYNVGQYAGDTARDINEWLLYGNASIGVKTAAATMSTVASLMYENACGLAGQPSDCLQFDNGIMASGLNNALTEYLQRGRAFLESSYAKALPVNNVTLAVEYFASRQWRTFESLLRYYLIPALRASTFAYETTLEDDTTSFNNKQMTGTITYCVVVGALYLFVLSRIPGRMDARSRRREMLLLTVPPDVIKSIPAFEAIVRTNYCHNKA* # ORIGINAL: g12790.t1 original gene structure, not modified by PASA NODE_1212_length_12979_cov_42.9374 . gene 5361 10812 . - . ID=g12790;Name=g12790.t1 NODE_1212_length_12979_cov_42.9374 . mRNA 5361 10812 . - . ID=g12790.t1;Parent=g12790;Name=g12790.t1 NODE_1212_length_12979_cov_42.9374 . five_prime_UTR 10783 10812 . - . ID=g12790.t1.utr5p1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . five_prime_UTR 10642 10666 . - . ID=g12790.t1.utr5p2;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 10783 10812 . - . ID=g12790.t1.exon1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 10298 10666 . - . ID=g12790.t1.exon2;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 10298 10641 . - 0 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 9568 10118 . - . ID=g12790.t1.exon3;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 9761 10118 . - 2 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 9085 9410 . - . ID=g12790.t1.exon4;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 8742 8942 . - . ID=g12790.t1.exon5;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 8742 8931 . - 0 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 8407 8563 . - . ID=g12790.t1.exon6;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 8407 8563 . - 1 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 8067 8229 . - . ID=g12790.t1.exon7;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 8067 8229 . - 2 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 7623 7821 . - . ID=g12790.t1.exon8;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 7623 7821 . - 0 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 7011 7391 . - . ID=g12790.t1.exon9;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 7011 7391 . - 1 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . exon 5361 6839 . - . ID=g12790.t1.exon10;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . CDS 6652 6839 . - 1 ID=cds.g12790.t1;Parent=g12790.t1 NODE_1212_length_12979_cov_42.9374 . three_prime_UTR 5361 6651 . - . ID=g12790.t1.utr3p1;Parent=g12790.t1 #PROT g12790.t1 g12790 MHVREDAHIIDFVDILGEYASPQPPHHCGTESLPVDAHPLSSPESPATVPDISSILTFAGDCNDAQFGGEEWLFQQLPAAHAALGSAADLDSSCNVAPTTPDMSPEDGLDMFDMSFDAGLFGLDEARMIKHDALGSFPDKLRYPTHMDVLLVRILFPHKCPHSFCPTKAKPLLKRECDRMDCAFCGVPFSRKSTHRRNAKRMFIGFANRLTAEEVSHAKKVFGSSKWVAWTQI*MMASDPASSKRPHEGYAGDHDPDSISTDAACAKRMRLDVQRPSDSNGEEDDGSALRVTAAVFHGVDGDERGRRLVLQRFRAPQLQDGEMLVRIVLATICGSDVSTYVGKRMEPFPSVLGHEAVAVVVATGGATCERRIGERVTFSITDVCGRCYMCRHEDLSQKCKTVFKYGHAMLSDGSGLNGCYASHVLLRKGTKTVVIPSSISDAAAAPVNCALATVVAALRAVPPAGSVDIEDGICFNRRLAVVQGAGLLGLYACALLRDIGFHEVRCVDVNAERMKLAERFGADGSTAGDSSSNIVWRGEDGCADVVVEVCGVADVVREGIRLLRPFGTYVFVGMVHPATSLSQITGEMIIRKCLTIKGVHNYSHADLVAAVAFLSRTSHIYPYDQIVDPTVYTLDHIEDAFVAASTQRHLRVGVRPQSP* # ORIGINAL: g12788.t1 original gene structure, not modified by PASA NODE_1212_length_12979_cov_42.9374 AUGUSTUS gene 1256 3173 . + . ID=g12788;Name=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS mRNA 1256 3173 . + . ID=g12788.t1;Parent=g12788;Name=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 1256 1768 . + . ID=g12788.t1.exon1;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 1256 1768 . + 0 ID=cds.g12788.t1;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 1990 2196 . + . ID=g12788.t1.exon2;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 1990 2196 . + 0 ID=cds.g12788.t1;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 2305 2627 . + . ID=g12788.t1.exon3;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 2305 2627 . + 0 ID=cds.g12788.t1;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 2789 3173 . + . ID=g12788.t1.exon4;Parent=g12788.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 2789 3173 . + 1 ID=cds.g12788.t1;Parent=g12788.t1 #PROT g12788.t1 g12788 MLSPSPEQNQASLFFFMTSPMVAVLGVLALKLRRRRIEAMPIEEFSNAVEFELKIRYHLIEKGLLFAPRASSLAPSPAEKTDKIELAKQKQILLEVNEWFRATCKQHPRSSLLHLFWSNFHLYWQHSKHLAMAELTLAEELNPRFDEAFIIYRRRKMADDEQSGGNGDVIQFITYQKHYVEAQRNDIRCSQAQWKFWDELLKSRPDILKLNRIADIITMGISSAQKSYQQLIRINPNSPQMLRMYAGFLMDVAYDARAADTLLMRATELDECGQNNALGVMDDEGGRDSALLAQMSSDPRIPTVTISGDHGGEGIVQDMNAAASKLLGYRQRELVGTNVNVIVPEPFSTNHNAYIRNYLETGEAKFLDCVRLTCAVHRSGYIVPVHVAVRQSCSPAGALVFIGHLRPVVTTDHFVLVNLANGRIVGSTASAAEMFGNLSDGHSHPEQGFSVATLLPDYPAIVLGAESGPTSHSRT* # ORIGINAL: g12787.t1 original gene structure, not modified by PASA NODE_1212_length_12979_cov_42.9374 AUGUSTUS gene 81 989 . + . ID=g12787;Name=g12787.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS mRNA 81 989 . + . ID=g12787.t1;Parent=g12787;Name=g12787.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 81 989 . + . ID=g12787.t1.exon1;Parent=g12787.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 81 989 . + 0 ID=cds.g12787.t1;Parent=g12787.t1 #PROT g12787.t1 g12787 MTPTMAPAAQATDGMKGLRGSVFHGTAGGRAASVHFSDESSSDDDVFGTRRKSAFSQTLTALKNGLMGVLFVMAKDAASSPVLVAIEMFIDFMQLLAFPFCAYQKHEQFPWNPAQTSWFKSVVRPFVFETYFDTHIAAFYATIAIICLLLVNAAFVAYSFSQNQYRMMWTLKLLRTISGLVSTIFFIPFVAILAAKLHCEGSTCWAGEDILGKILAIVFGLGFIILAFLVAICVCEQDPNSRSVLSRPHSRVDLYYIAVRALLTVMFTLLDNTWHQWILVGTLLGSTVTVAAAYTWYQPWFK* # ORIGINAL: g12791.t1 original gene structure, not modified by PASA NODE_1212_length_12979_cov_42.9374 AUGUSTUS gene 11539 12939 . - . ID=g12791;Name=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS mRNA 11539 12939 . - . ID=g12791.t1;Parent=g12791;Name=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 12455 12939 . - . ID=g12791.t1.exon1;Parent=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 12455 12939 . - 0 ID=cds.g12791.t1;Parent=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 11993 12267 . - . ID=g12791.t1.exon2;Parent=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 11993 12267 . - 1 ID=cds.g12791.t1;Parent=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS exon 11539 11705 . - . ID=g12791.t1.exon3;Parent=g12791.t1 NODE_1212_length_12979_cov_42.9374 AUGUSTUS CDS 11539 11705 . - 2 ID=cds.g12791.t1;Parent=g12791.t1 #PROT g12791.t1 g12791 MQSVNYSPVLLRAGSHPQPSDQGASSPPIASTFPSLPSTPSFARPPSGLRNELFFFPPNDSPQLHDSAPGTPAAESRTASALSFTRRLDMADDGEYEEHSAEDGEEGDEGPRADARGAGEGSRAPSAAGYSRGPTFIDDDEVGDGRLRYYFEGRVLHWPADGSAARIGVAAAPNDARDVPIAFLSIPYDSEVVAYVAVDSADQPSNGGEPVPPRPQRYATFSIGIVGTTEDIFGCGVDIDDGRVFFTVNGSLIATPVRCSRKLVSELSIVPMALCPRSEVNFGHQEFAFAPANSAAHRTLAVKHMSMQ* # ORIGINAL: g2946.t1 original gene structure, not modified by PASA NODE_6354_length_587_cov_45.5059_potentialcontaminant AUGUSTUS gene 356 587 . - . ID=g2946;Name=g2946.t1 NODE_6354_length_587_cov_45.5059_potentialcontaminant AUGUSTUS mRNA 356 587 . - . ID=g2946.t1;Parent=g2946;Name=g2946.t1 NODE_6354_length_587_cov_45.5059_potentialcontaminant AUGUSTUS exon 356 587 . - . ID=g2946.t1.exon1;Parent=g2946.t1 NODE_6354_length_587_cov_45.5059_potentialcontaminant AUGUSTUS CDS 356 587 . - 1 ID=cds.g2946.t1;Parent=g2946.t1 #PROT g2946.t1 g2946 LRSGNYIINNKNVQPKVNVIQDCRNAIDKMVHPVLRAAFPGWHPRDVRSADAAESDGGAGSELHAHATDNGMDVDE* # ORIGINAL: g2782.t1 original gene structure, not modified by PASA NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS gene 1 929 . - . ID=g2782;Name=g2782.t1 NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS mRNA 1 929 . - . ID=g2782.t1;Parent=g2782;Name=g2782.t1 NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS exon 688 929 . - . ID=g2782.t1.exon1;Parent=g2782.t1 NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS CDS 688 929 . - 0 ID=cds.g2782.t1;Parent=g2782.t1 NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS exon 1 489 . - . ID=g2782.t1.exon2;Parent=g2782.t1 NODE_5283_length_929_cov_42.8056_potentialcontaminant AUGUSTUS CDS 1 489 . - 1 ID=cds.g2782.t1;Parent=g2782.t1 #PROT g2782.t1 g2782 VAVPIDWTVFTGFVVKNAVLSVSVKTDGLGRRQFAGVIAGPVRVGSSDVTLRIPFPAGVGAASIDIPSNRFADAAAINLGRSLTAPELARIKTDYSTSFKLSELILAFAPLGLSLGGSDFGTSISALATSLQGFAVNRFEFSLRPGVTLPVITRFALSLVSNPDMTPVTVFRSFTASNILASIGMETDSYNTRRVYGRFACTLTDPKAGMFGIDLPINIRGATASIYLPNGDAQAAAGVRIVD # ORIGINAL: g11432.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 15586 16198 . - . ID=g11432;Name=g11432.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 15586 16198 . - . ID=g11432.t1;Parent=g11432;Name=g11432.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 16056 16198 . - . ID=g11432.t1.exon1;Parent=g11432.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 16056 16198 . - 0 ID=cds.g11432.t1;Parent=g11432.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 15586 15910 . - . ID=g11432.t1.exon2;Parent=g11432.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 15586 15910 . - 1 ID=cds.g11432.t1;Parent=g11432.t1 #PROT g11432.t1 g11432 MRSRGMRLLLPWAALKCTLSTPSASRTPGREPYPKAPPTQLLYSVTDNGIKTLVAWGYTAASTFLKEGDERGLALYPPLFESAVYKDTITATTSSATTVWCEVMEVVADMLRVLKDDVIKIISTALQTSAGCSLCPPSETHAQRTSCAVQPSVRE* # ORIGINAL: g11433.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 17294 17638 . - . ID=g11433;Name=g11433.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 17294 17638 . - . ID=g11433.t1;Parent=g11433;Name=g11433.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 17294 17638 . - . ID=g11433.t1.exon1;Parent=g11433.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 17294 17638 . - 0 ID=cds.g11433.t1;Parent=g11433.t1 #PROT g11433.t1 g11433 MPKLTKAYGGFVDAFMEEVSAAVDTQWTVLTKLWGTMGGVIGEEADAMISKCWEPPTLSFEKPDIAFDMSLMHIPFRDNRDKTVMIITKEFTDAVLRYVTEQWFSECGHGRCAH* # PASA_UPDATE: g11430.t1, single gene model update, valid-1, status:[pasa:asmbl_7905,status:3], valid-1 NODE_516_length_21971_cov_40.9802 . gene 5313 11723 . + . ID=g11430;Name=g11430.t1 NODE_516_length_21971_cov_40.9802 . mRNA 5313 11723 . + . ID=g11430.t1;Parent=g11430;Name=g11430.t1 NODE_516_length_21971_cov_40.9802 . five_prime_UTR 5313 5465 . + . ID=g11430.t1.utr5p1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 5313 5495 . + . ID=g11430.t1.exon1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 5466 5495 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 5657 5767 . + . ID=g11430.t1.exon2;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 5657 5767 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 6101 6183 . + . ID=g11430.t1.exon3;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 6101 6183 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 6335 6506 . + . ID=g11430.t1.exon4;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 6335 6506 . + 1 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 6889 6998 . + . ID=g11430.t1.exon5;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 6889 6998 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 7367 7436 . + . ID=g11430.t1.exon6;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 7367 7436 . + 1 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 7838 7949 . + . ID=g11430.t1.exon7;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 7838 7949 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 8169 8293 . + . ID=g11430.t1.exon8;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 8169 8293 . + 2 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 8565 8640 . + . ID=g11430.t1.exon9;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 8565 8640 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 8815 8991 . + . ID=g11430.t1.exon10;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 8815 8991 . + 2 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 9438 9610 . + . ID=g11430.t1.exon11;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 9438 9610 . + 2 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 10018 10085 . + . ID=g11430.t1.exon12;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 10018 10085 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 10204 10285 . + . ID=g11430.t1.exon13;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 10204 10285 . + 1 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 10515 10634 . + . ID=g11430.t1.exon14;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 10515 10634 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 10978 11111 . + . ID=g11430.t1.exon15;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 10978 11111 . + 0 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . exon 11382 11723 . + . ID=g11430.t1.exon16;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . CDS 11382 11478 . + 1 ID=cds.g11430.t1;Parent=g11430.t1 NODE_516_length_21971_cov_40.9802 . three_prime_UTR 11479 11723 . + . ID=g11430.t1.utr3p1;Parent=g11430.t1 #PROT g11430.t1 g11430 MSGNVTIGGSTPAVTYDIRDLKTPIVSNTALRVFVLALENSTTIQWKLLSDSNVFCLRNKRMLDAPLALSLVDTSKPPSSEISAEERRRLIKQVDESPVKYGPSESSFKFATANDYHEAYIAGRLTPETVAERILSAIEKSDIDPRPLRAFISVIRDDVMAQAAASTKRYKEGKPLSPIDGVPVAVKDEMDQSGHKTTLGTAFYADIDGVAASDATAVANMRALGALLIGKTNMHEIGIGVTGSNVTHGFARNPYDVGAHTGGSSSGSAAAVAAGLCPIAIGADGGGSVRIPASLCGIFGLKCTWGRVGEHGCAPLCPSVGHVGPMAATARDLALGYLAMAGPDVHDSASQLQPKPHYTPNTGTEKLRVGIFRPFFDHADADIVAACNGAVAALEAKGATVVQIEIPELEEIKHAHLITIVSEMLTGMAPHMSQHRHEFSPTSRIILALGGQFTAVDYNQAQQMRRRAVESLKKVFDKCDVIATPMTACTAPTIPEYALATDQINGYVSGRIMRFSPLANLTGIPAISIPIGVDASGRPIGFQLMGRWWEEHVLLSAAEVIESAVQRPKPALHFDILGE* # ORIGINAL: g11431.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 12417 14783 . + . ID=g11431;Name=g11431.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 12417 14783 . + . ID=g11431.t1;Parent=g11431;Name=g11431.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 12417 14783 . + . ID=g11431.t1.exon1;Parent=g11431.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 12417 14783 . + 0 ID=cds.g11431.t1;Parent=g11431.t1 #PROT g11431.t1 g11431 MAPTKPCRAGFHCNRKETCTFAHPDSAPAPSVTVKFQITNPVRYEAGAGRSDSPQDNVSRTYSPPFAKGHMPPSPDFANLYGARITSPLGKAPRPAQASQPTAPPPGARAASPQCGPASRKEHGPANGRITKIESSPDRPYGFIDVGHKSSVYFALKNCYAGAAVGHLIIVTWYESSDEGDKKKFTAKSVIRDEAREELHAMGRMIRDITGGAANIDPDTLDAVAMKELLTSVKLKVKEQELRRARAIRAKIGEIERASHAQVAFLLDCTGSMSSYIEASKEAMTAIRDKAVDVLPSANVTCAFVGYRDHGDEAVPTLNFTDSEIVFKSHLARVAAEGGDDQAEDVYSGLQAIAALSWDAQIPTKLLFHIGDAPTHGIFFAEGKTFGDNSPSFDSNGSMSCAVLKKICHNFKVQYFFLKINSSTDPMISVYNRLLNSKEGVETIFTEKLKNAASIIDIAVAKTSTAIFASHTAASVNVAVDGASHATYHVELAQIISTKEAEASRRVTAASIAGKSAERVPRKADINVGIAVPGKPGSQCVEVFSSTLPCSLDALSASMTCPDFKAGSRERHMKIDDSAPFSKGGQRQVCLAVDTTFEETTEYVLKTHMEARTLADEEWKAKMDLETQAIAAFLAQEFCKLTASPKSVRYLKAKAIKFKDTRGRIRFATIEKILSGEYLKWSSNAAYSRGEDDPEFSATLGAFSHWTYVWTKQYLMVVDVQGIKLTDKEFVLTDPAIHCTDLARFGETNLGDDGFGLFFEGHNCNHICKKLALPRHPKQRAKKIFYVK* # ORIGINAL: g11436.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 19613 21306 . - . ID=g11436;Name=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 19613 21306 . - . ID=g11436.t1;Parent=g11436;Name=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 21278 21306 . - . ID=g11436.t1.exon1;Parent=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 21278 21306 . - 0 ID=cds.g11436.t1;Parent=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 20602 20790 . - . ID=g11436.t1.exon2;Parent=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 20602 20790 . - 1 ID=cds.g11436.t1;Parent=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 19613 20372 . - . ID=g11436.t1.exon3;Parent=g11436.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 19613 20372 . - 1 ID=cds.g11436.t1;Parent=g11436.t1 #PROT g11436.t1 g11436 MTYNSRHPEGGGCNVVAVDFGDAQSGYAFDAVATKVHTEQTIRVKYDWPEANSANFESDTKAPTQLLYSVTDNGIKTLVAWGYTAVSTFLKEGHKRGDLALVKNFKARLFEGVNQTITVTTSSGRTVQFEVMELVADILRMLKDDVIKTITSTGTWTAADVRWVLTVPAIWDARAMDVIRRAAVRAGMIGDTPAEHVRLMLCVEPEAVALHIIDRHETIMSLKSLTDGTRILVVDVGGGTVDITLHECRNKGALFELCAATGRPFGSAYVNKEVESFLASIIGRDALDTLNTEHPAGMARFFANFEPVKRSFTPGGQDATWGMIV* # PASA_UPDATE: g11429.t1, single gene model update, valid-1, status:[pasa:asmbl_7908,status:12], valid-1 NODE_516_length_21971_cov_40.9802 . gene 1631 4883 . - . ID=g11429;Name=g11429.t1 NODE_516_length_21971_cov_40.9802 . mRNA 1631 4883 . - . ID=g11429.t1;Parent=g11429;Name=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 4585 4883 . - . ID=g11429.t1.exon1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 4585 4883 . - 0 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 4440 4474 . - . ID=g11429.t1.exon2;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 4440 4474 . - 1 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 4141 4301 . - . ID=g11429.t1.exon3;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 4141 4301 . - 2 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 3798 3894 . - . ID=g11429.t1.exon4;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 3798 3894 . - 0 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 3503 3613 . - . ID=g11429.t1.exon5;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 3503 3613 . - 2 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 2932 3053 . - . ID=g11429.t1.exon6;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 2932 3053 . - 2 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 2289 2425 . - . ID=g11429.t1.exon7;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 2289 2425 . - 0 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . exon 1631 2017 . - . ID=g11429.t1.exon8;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . CDS 1939 2017 . - 1 ID=cds.g11429.t1;Parent=g11429.t1 NODE_516_length_21971_cov_40.9802 . three_prime_UTR 1631 1938 . - . ID=g11429.t1.utr3p1;Parent=g11429.t1 #PROT g11429.t1 g11429 MPRAKQTPHADDDTVPVVKKVRGRASPAKIVVEGALSMNKEGAKAVASKPVSRGTSATPRMPASRLSEYELERLENIRRNAELLQSLGIGAAKGDLTSVGVVRNLAPVVRRERKPRATPVAVPTATRSSSRIRGVPPAPRRKVDGGGAQVDADGNAGDDNADASEDEIVDVSVLKTAEEHFSADVIAKAVRVDSHYHGWLNAGVRHRHGLESSAADAWEKNGGGAFSFKNPLGTAEGAEAANRKVKGVSDARTISAKLFRKNPNAYFYRHTEPGVVARTYGAGDKWGLFASHIPHRVGYQCSNYYRQVVLAEGLVIDPNYRFSYSGQAVYIGPHMRSMRGVREEDC* # ORIGINAL: g11435.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 18557 19558 . - . ID=g11435;Name=g11435.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 18557 19558 . - . ID=g11435.t1;Parent=g11435;Name=g11435.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 18557 19558 . - . ID=g11435.t1.exon1;Parent=g11435.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 18557 19558 . - 0 ID=cds.g11435.t1;Parent=g11435.t1 #PROT g11435.t1 g11435 MREAFPSIEDYGELVFTNDVMTRLFEPVIQGILNAIEVQLNRVTPPRKCDHLVLVGGFMSSLYLQRRIRDRFGNISAFKSSGKMGITAPADPGVAVLAGAVAYGLSQHRQLARHAPSYSPVSVLDKCMPATNGFHMTPVDVAAFKTQVLNCAESLRKCVDDCDSFVETVGLDEPRKRLGDRGNDAKGSPIYIPVYGVVKAGKSTLLSCLTRTNILPSRPLPMTTIPIKILHKSGTEGVSLVIPNAEQWNACIADVVLKNNTLPTGYEHPEHVTTLFRKAKEGSVRFKTGILRDADAIAKELMLLSDVARLCFLLDRHVTSTSTTLTCHSSTFR* # ORIGINAL: g11434.t1 original gene structure, not modified by PASA NODE_516_length_21971_cov_40.9802 AUGUSTUS gene 17766 18494 . - . ID=g11434;Name=g11434.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS mRNA 17766 18494 . - . ID=g11434.t1;Parent=g11434;Name=g11434.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS exon 17766 18494 . - . ID=g11434.t1.exon1;Parent=g11434.t1 NODE_516_length_21971_cov_40.9802 AUGUSTUS CDS 17766 18494 . - 0 ID=cds.g11434.t1;Parent=g11434.t1 #PROT g11434.t1 g11434 MPGPSCSVFLERTNRRVLDGSRGALLVAPQSQIESNAMNEVLESIADSKTIRKILIALNHVDIISDRKKQLPDVIKRLEGIMLEVECPFDIIPVAASRIKMMCELQAELDSGRAGFAESKIWTNVVEAMGIHPEQLVDAKEYARKLIPQELETYNAVDLVKAVKSIFLDTALKDCVDDVTVACEALIKFFRETRVSTRGAESQHRTPMDVTAVHAGVNHFHATVSSIQPALQRELRVSQSAS* # PASA_UPDATE: g10511.t1, single gene model update, valid-1, status:[pasa:asmbl_7394,status:12], valid-1 NODE_4504_length_1530_cov_31.8302 . gene 492 1326 . - . ID=g10511;Name=g10511.t1 NODE_4504_length_1530_cov_31.8302 . mRNA 492 1326 . - . ID=g10511.t1;Parent=g10511;Name=g10511.t1 NODE_4504_length_1530_cov_31.8302 . five_prime_UTR 1277 1326 . - . ID=g10511.t1.utr5p1;Parent=g10511.t1 NODE_4504_length_1530_cov_31.8302 . exon 1201 1326 . - . ID=g10511.t1.exon1;Parent=g10511.t1 NODE_4504_length_1530_cov_31.8302 . CDS 1201 1276 . - 0 ID=cds.g10511.t1;Parent=g10511.t1 NODE_4504_length_1530_cov_31.8302 . exon 492 1052 . - . ID=g10511.t1.exon2;Parent=g10511.t1 NODE_4504_length_1530_cov_31.8302 . CDS 724 1052 . - 2 ID=cds.g10511.t1;Parent=g10511.t1 NODE_4504_length_1530_cov_31.8302 . three_prime_UTR 492 723 . - . ID=g10511.t1.utr3p1;Parent=g10511.t1 #PROT g10511.t1 g10511 MSEQGNFSRYRQELHSINPPVIPFLGIYLTDLVMIETGNKSLIKPDKTELINFDKRRKIATVIQEIQRYQQTPYHLQEVDFLRQYLLDVQILDTNAMYERSLFLEPREARPSTIPNNSSQSPASLRKGSIMPSS* # ORIGINAL: g13529.t1 original gene structure, not modified by PASA NODE_1024_length_14587_cov_45.2018 AUGUSTUS gene 12776 13657 . - . ID=g13529;Name=g13529.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS mRNA 12776 13657 . - . ID=g13529.t1;Parent=g13529;Name=g13529.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS exon 12776 13657 . - . ID=g13529.t1.exon1;Parent=g13529.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS CDS 12776 13657 . - 0 ID=cds.g13529.t1;Parent=g13529.t1 #PROT g13529.t1 g13529 MKAHSSIRNVVCVNGLSAAAVASATVLARLHPTALVASGLALTSYLVSRYLLTRSHRTLLQWGGLLKIIAVLPLGLCAVVAYGLAPMHWRQRNLWWFNVYINAAVFGNIAGMLFVPAGGTMRGRTTRIACASLVVWLVKEASSQGWQTVRYNDDGAFLFTAAPLTWIVCHALYRAVLVTLPSFESVRYIIMEPASLATMASMHWAWSAGHEHTGGSPINMGAYFGYADTLVVACMSATSKLIDETSAPATKTAAATSAASSKQSFWIRDRALDAVGVAVHIFVCCVSVWNIVM* # PASA_UPDATE: g13527.t1, single gene model update, valid-1, status:[pasa:asmbl_82,status:12],[pasa:asmbl_83,status:12], valid-1 NODE_1024_length_14587_cov_45.2018 . gene 3805 8521 . - . ID=g13527;Name=g13527.t1 NODE_1024_length_14587_cov_45.2018 . mRNA 3805 8521 . - . ID=g13527.t1;Parent=g13527;Name=g13527.t1 NODE_1024_length_14587_cov_45.2018 . five_prime_UTR 8355 8521 . - . ID=g13527.t1.utr5p1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 8316 8521 . - . ID=g13527.t1.exon1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 8316 8354 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 7621 7993 . - . ID=g13527.t1.exon2;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 7621 7993 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 7286 7398 . - . ID=g13527.t1.exon3;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 7286 7398 . - 2 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 6868 6949 . - . ID=g13527.t1.exon4;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 6868 6949 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 6065 6654 . - . ID=g13527.t1.exon5;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 6065 6654 . - 2 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 5604 5867 . - . ID=g13527.t1.exon6;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 5604 5867 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 5304 5393 . - . ID=g13527.t1.exon7;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 5304 5393 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 4931 5071 . - . ID=g13527.t1.exon8;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 4931 5071 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 4593 4686 . - . ID=g13527.t1.exon9;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 4593 4686 . - 0 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 4246 4392 . - . ID=g13527.t1.exon10;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 4246 4392 . - 2 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . exon 3805 4076 . - . ID=g13527.t1.exon11;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . CDS 3871 4076 . - 2 ID=cds.g13527.t1;Parent=g13527.t1 NODE_1024_length_14587_cov_45.2018 . three_prime_UTR 3805 3870 . - . ID=g13527.t1.utr3p1;Parent=g13527.t1 #PROT g13527.t1 g13527 MQLRQGAGVRKRKADDSDVDIDIETVSNSTGSRETSPIGKRTRRSSGSRAKENDVEDIELAIALSQSLHETSGKSPRASEKSPRGPKVSAATTTPPRKKKIKDEEAPAVCGFCLGNESSNKKQEPEEMIHCSTCPNMGHPSCLQFSKSLAARVKTYPWQCMHCKICCLCTKAGNDSRLLLCDECDKGFHTFCLKPPLTTMPKGAWVCEHCVIESGLSREAAVKKAAAALARANASDSDATATVKGAKVAVRGRGRPKRKAESSDDSDANDDETLKRAAAVAVASRRGRKAKVAKVETDSYDDDLASESESENDSDNSNVDDGGEEQEVAPPPPRRRGRPTKNKAAVPAEPRVRARKPGKEPEPRRASASVAAEMDLSDQPTSEDVALFQAAQERANAALRRDLSAFMPDDASAGHVGGEHGVGEHGGEHGGDHVGGAKVRAIEFGRFQLGTWYSSPYPEEYARLGKLFLCEFCLKYMKSSAILQRHMTKCEWRHPPGDEIYRDGVVSVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTECDSSGCHLVGYFSKEKNSFLNYNVSCIMSMPQYMRKGYGRMLIDFSYLLSKKEEKAGSPEKPLSDLGLISYRSYWKSIILDYLEKNKATDVSIKEISLETAISPLDIVSTLQSLGMVKYWRGRHVIVVRPDLMAEHVSKAAAKKFRSVDPSCLRWTPFVAGK* # PASA_UPDATE: g13526.t1, single gene model update, valid-1, status:[pasa:asmbl_84,status:12], valid-1 NODE_1024_length_14587_cov_45.2018 . gene 158 2777 . + . ID=g13526;Name=g13526.t1 NODE_1024_length_14587_cov_45.2018 . mRNA 158 2777 . + . ID=g13526.t1;Parent=g13526;Name=g13526.t1 NODE_1024_length_14587_cov_45.2018 . five_prime_UTR 158 158 . + . ID=g13526.t1.utr5p1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 158 419 . + . ID=g13526.t1.exon1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 159 419 . + 0 ID=cds.g13526.t1;Parent=g13526.t1;5_prime_partial=true NODE_1024_length_14587_cov_45.2018 . exon 662 860 . + . ID=g13526.t1.exon2;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 662 860 . + 0 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 1050 1204 . + . ID=g13526.t1.exon3;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 1050 1204 . + 2 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 1554 1661 . + . ID=g13526.t1.exon4;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 1554 1661 . + 0 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 1942 2002 . + . ID=g13526.t1.exon5;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 1942 2002 . + 0 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 2264 2329 . + . ID=g13526.t1.exon6;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 2264 2329 . + 2 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . exon 2626 2777 . + . ID=g13526.t1.exon7;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . CDS 2626 2636 . + 2 ID=cds.g13526.t1;Parent=g13526.t1 NODE_1024_length_14587_cov_45.2018 . three_prime_UTR 2637 2777 . + . ID=g13526.t1.utr3p1;Parent=g13526.t1 #PROT g13526.t1 g13526 HVLAAVATNKVSDVAPRVVTEAFPAKEEPKMYVEVGSDDESHPETPSAQATPAKMARGQSASDGLVASDGSVNAKPAWIKQMPGDLKDDPLWQQVSHDTAGQAHQFHWRGSFSQAKHLGTLGLKDELRPRLFYNPIRNSVADAAVLGNGDVQSGLAQMSLDDLDAMRFELNCKVEELSGTLLDECNAAETYHQESKHLNKAISSMAKILQMHKESLSGQKASPSKKMSINPKDRAEHEFWKQIHIPWRNGMTPKQIELLSAVLDSVERRRQSFAQMFQAYTNELSK* # ORIGINAL: g13528.t1 original gene structure, not modified by PASA NODE_1024_length_14587_cov_45.2018 AUGUSTUS gene 8900 12180 . - . ID=g13528;Name=g13528.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS mRNA 8900 12180 . - . ID=g13528.t1;Parent=g13528;Name=g13528.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS exon 11734 12180 . - . ID=g13528.t1.exon1;Parent=g13528.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS CDS 11734 12180 . - 0 ID=cds.g13528.t1;Parent=g13528.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS exon 8900 11512 . - . ID=g13528.t1.exon2;Parent=g13528.t1 NODE_1024_length_14587_cov_45.2018 AUGUSTUS CDS 8900 11512 . - 0 ID=cds.g13528.t1;Parent=g13528.t1 #PROT g13528.t1 g13528 MGKNRRRRRRDAETHPASRSDWAGGTGSPQADGDDDLDASLMIIASNGRDELFEKEFIFVPLKHGAASLPCPEDLFSGADFVDDALMRVKEELNATRTLLSEKDILVWHEHTRFTSHAGSVVRHLRRNMNPELCTIAWAKMTEILERYQLLSEAHTIDRHRINTLHVCEAPGGFVTATNHHIRTKFPSAEWDWRAQSLNPYHEGNDLHAMLDDDRFILETQKNWHFGEDNTGSLLSHVNIESLWRVARGMGGIALVTADGSVDCADDPYGQETTVAGLHLAEFVFALGALSVGGSLVLKLFTCFESQTVGLLYIAQCVFSRVALFKPATSKSGNSETYLVASGFMGISGAHLERLLSVVSRGPPAGVAMVRREHIPDAFMEQMRACVGQFCGWQRDVITRNLALEGKISPSLRHFIGRLKSSVAEEYVWHYSVVRLDEERKIAPYAGIDGSFVAAGLSVSSALNGNAAIRGGGSLAVRREVKRKHDGFVEGDIECAGESIEAKRPRTEFDAIGTPGCNLYGAEDGSVAPEGVYSKFAIEQMKRLGHVAGSGLGVSGHGISRPISPAVKKDRLGIGSDPSAVSEGVGDSDKMSAAEVFVDSEQQGGGGSWMSYDPERVRRANILAGRDDVVLTLEQCIEREQWECVTGRALSAVLMSKFCPLELLKSLWVCRTALLPKVDGVAESDRQVARSRAFAVDALRADASMHAQVPFTSHDAIEYAALNRVCEWLMPSVTLPPRTLTCVDLAGTHPGFAEFVGWKIGARCKIIVAWRADSTKSMHGECLAGTQSKFCTRATCASLVSTGGVCGGSNALVASVRPFLMGSHVDVAHVDAYPRASRANCRHREGTVHAVLVEQFRAALSLLGPGGVLLMRVGDCFTRFTAGFLYLAYRLFETVGIVKPFAMDPASDERFVVCLRLRRDVDADADKSAVLALLSGVENSLQGVDDACDVHEIVPNRHLLERNFWEAVLAGNIRIGRREIAANLLLCDMLHVDGAVGDGGPAAAHVTDALEALDLQCAD* # ORIGINAL: g8926.t1 original gene structure, not modified by PASA NODE_636_length_19860_cov_43.1238 AUGUSTUS gene 12321 13332 . - . ID=g8926;Name=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS mRNA 12321 13332 . - . ID=g8926.t1;Parent=g8926;Name=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 13300 13332 . - . ID=g8926.t1.exon1;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 13300 13332 . - 0 ID=cds.g8926.t1;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 13072 13163 . - . ID=g8926.t1.exon2;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 13072 13163 . - 0 ID=cds.g8926.t1;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 12757 12895 . - . ID=g8926.t1.exon3;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 12757 12895 . - 1 ID=cds.g8926.t1;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 12321 12605 . - . ID=g8926.t1.exon4;Parent=g8926.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 12321 12605 . - 0 ID=cds.g8926.t1;Parent=g8926.t1 #PROT g8926.t1 g8926 MLTKQFFDWDETRNSIMYITIAVVFMVCYVIIHILSQRLQDRYLIAIGLAFEGTAFILDLIFMPRADSNGHMPMWQFVLTVTVFVIGLPFFMVAVPSLFSKLTTKRRQGLAQGLLQVMASLGCICGPLWGGVSYGKFYVMFGVMLGPLTLLIVTFSLAFKRLRSKDELKLDVEDSEHKPLLE* # ORIGINAL: g8927.t1 original gene structure, not modified by PASA NODE_636_length_19860_cov_43.1238 AUGUSTUS gene 13533 15889 . - . ID=g8927;Name=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS mRNA 13533 15889 . - . ID=g8927.t1;Parent=g8927;Name=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 15791 15889 . - . ID=g8927.t1.exon1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 15791 15889 . - 0 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 15599 15671 . - . ID=g8927.t1.exon2;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 15599 15671 . - 0 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 15429 15510 . - . ID=g8927.t1.exon3;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 15429 15510 . - 2 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 15076 15245 . - . ID=g8927.t1.exon4;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 15076 15245 . - 1 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 14754 14911 . - . ID=g8927.t1.exon5;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 14754 14911 . - 2 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 14521 14611 . - . ID=g8927.t1.exon6;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 14521 14611 . - 0 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 14215 14300 . - . ID=g8927.t1.exon7;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 14215 14300 . - 2 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 13912 14110 . - . ID=g8927.t1.exon8;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 13912 14110 . - 0 ID=cds.g8927.t1;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 13533 13702 . - . ID=g8927.t1.exon9;Parent=g8927.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 13533 13702 . - 2 ID=cds.g8927.t1;Parent=g8927.t1 #PROT g8927.t1 g8927 MSSPGSGTSSYRTAHGGSYVSTSGHMSHRRASSISVRPTLPPHYVPEFVDTEVEEVEAGYDPEDESASLTSPAVASYPHSMADGSSPRGQSSSLATSVHESGVGSINARDEELETLAGRIPGRKASLITVSLLNFLCAVEYGLILPTIWAYLNSLHEERHWFLGVVISFFNVAQLFCAPVVGWMSDRMSMKSILMVTLGFNILGNLVYFAAQGAWMVLLGRILAGMGASSGPVIMSYVVRVTSEKERTAVVTKVIAVQEAGLLIGPGLNFALAHFNFPIGSLTVNSLTAPGFCMAIISLCAVVMVLCFFMNPPPVETDKGRRHSALATEMRKGGWAEIREELLTLPILVIYLAEFVLLFNQTTLETASIACPDSV* # ORIGINAL: g8925.t1 original gene structure, not modified by PASA NODE_636_length_19860_cov_43.1238 AUGUSTUS gene 6603 12155 . + . ID=g8925;Name=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS mRNA 6603 12155 . + . ID=g8925.t1;Parent=g8925;Name=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 6603 6732 . + . ID=g8925.t1.exon1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 6603 6732 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 6824 6920 . + . ID=g8925.t1.exon2;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 6824 6920 . + 2 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 7123 7207 . + . ID=g8925.t1.exon3;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 7123 7207 . + 1 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 7318 7458 . + . ID=g8925.t1.exon4;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 7318 7458 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 7595 9465 . + . ID=g8925.t1.exon5;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 7595 9465 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 9641 9824 . + . ID=g8925.t1.exon6;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 9641 9824 . + 1 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 9938 10126 . + . ID=g8925.t1.exon7;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 9938 10126 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 10239 10430 . + . ID=g8925.t1.exon8;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 10239 10430 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 10582 10758 . + . ID=g8925.t1.exon9;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 10582 10758 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 10851 11105 . + . ID=g8925.t1.exon10;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 10851 11105 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 11258 11338 . + . ID=g8925.t1.exon11;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 11258 11338 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 11553 11850 . + . ID=g8925.t1.exon12;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 11553 11850 . + 0 ID=cds.g8925.t1;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 11944 12155 . + . ID=g8925.t1.exon13;Parent=g8925.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 11944 12155 . + 2 ID=cds.g8925.t1;Parent=g8925.t1 #PROT g8925.t1 g8925 MSGHHGHGLHGGLADDGRQRVDSYEERALRRAKKKEDQRAQLQTLRDGSDKIMERMSTPPTARRDIQLDRSVAIGNASSLPTQEEIQMTQSIIKRQRLLESRIRQALESLIGVREDELDPSDPRHAAVQRLIDCQRRVTALRSKTEEVLTKRLQSREESEPEPNKQMHIPPLPPPIPAPTTEREIPKPFTVDDPANASAVQEHYRRMSLDAEQVASMAMLEVDAIARAILATLSVGGAMAPAEEHEAGIARSEAHHSSPVMARKLHETVSAASATPESGSGLGEQQSPFAPAEGASADGRSREGSASLVDFERPGEAVDLGPINPVALAVLESTKASASRQDSLCSVSALPGVAPPPAAQSASDLGRANTASHTSAGAQSPSHKSQSTPLPPDVLNPASLLSVAAGMSIQIPSSPASKLRSKTILVNSADDSLLVPIGRIKDAPPSPSVLRKPSLQPAEVIAPTAMGLPSIDEPSKDSLRVPTSGTARGGAREQEPALPQPLPTHTQAADPARRPLSSHSEWGVEVELALSRPAPFVAVRVVNPRTVVHTNSKYTEYDVRVRSNVPKYKHEETSVRRRYSEFDWLRARLDRSDRRLAARLPGKSLITRFDDGYVEERRKGLEAFLCACVAEGRWEEEVFRLFLQSDLSVSALVALFDDTAATDALATAVEDMERDATTRAAEKRAADERRAVEEQRLAAERAIAKAAEDARIAEERVRLQRQQDEDDYAHAPRELLAAMGAKRLLGILAAAGIDARGLVEKQELVERILCERQIRGGGMGGGDDADGDRKYLSEVVGKWGRTGAWDAGPLLRDMYSDFRMMEAPTRPPVDGSITKEGYLEKQARGQRFSTLFRNWKRRWFVLRDGNLMYYESDKETQRSLGFLRVRGGEVKSLKGCQIQITDTRGRLMLVRAASDADAAAWHKVVEKECSWRGDGTDSLPHVVIDTGSCDVKAGFAMDNGYPQLVMPTLHSSSGEDVGFAALRPGAKAIRPMDPRSTYNFDALEDIWLEAYRRLGVSPSEHQAMLSAPQHFTTPNKKEMAEIFFEAIGVPALYIQQQSVLSMYSYRQITGIVVDIGERVDITPIDQGYVIKGGVSQLQYGGGDVSELLGRLMSESGYRFFSGIEGLVTRHIKEKMAYVALDYDAEVRGCLETPDAYSSTLDLSEYLLPDGTRTVSLSDARFRCAEGLFNPNLFGRDNPGVHQLTLDAINACSIGIRRSMCRNVYLAGGSSLFPGLGERLERELRAKLPSGTQVQVHRADSRKYAAYMGGCVLACLDNFDQMCMWHDDYLENGFDYMVDKNSAW* # ORIGINAL: g8928.t1 original gene structure, not modified by PASA NODE_636_length_19860_cov_43.1238 AUGUSTUS gene 16316 17992 . - . ID=g8928;Name=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS mRNA 16316 17992 . - . ID=g8928.t1;Parent=g8928;Name=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 17894 17992 . - . ID=g8928.t1.exon1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 17894 17992 . - 0 ID=cds.g8928.t1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 17628 17743 . - . ID=g8928.t1.exon2;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 17628 17743 . - 0 ID=cds.g8928.t1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 17309 17465 . - . ID=g8928.t1.exon3;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 17309 17465 . - 1 ID=cds.g8928.t1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 17025 17194 . - . ID=g8928.t1.exon4;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 17025 17194 . - 0 ID=cds.g8928.t1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 16695 16831 . - . ID=g8928.t1.exon5;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 16695 16831 . - 1 ID=cds.g8928.t1;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 16316 16563 . - . ID=g8928.t1.exon6;Parent=g8928.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 16316 16563 . - 2 ID=cds.g8928.t1;Parent=g8928.t1 #PROT g8928.t1 g8928 MLKDGKLFRVIEDNCWSAKRRLEECDATEVDVQVLSTVPVMFSYWAKPEDCLDLCRFLNDHLAHEVKCFPKRFVGLGTIPLQAPELAVQEIRRIVVDLGMNGIIIGSHVNEWNLDAPELRPIFAACEELGAAVFVHPWDMPTTGRMSKYWLPWLVGMPAETATAICCMIMGGVFERFPKLRVCFAHGGGSFPIIVGRVCHGFEVRPDLCAVENAIHPSKYVGKFWVDSLLHDTTALKYVVDLLGERRVMLGSDYPFPLGEAHPGKLIMSVAEFSEETKARLLAGNALDFLGVDASRFAPQCATAAAEL* # ORIGINAL: g8922.t1 original gene structure, not modified by PASA NODE_636_length_19860_cov_43.1238 AUGUSTUS gene 2 83 . + . ID=g8922;Name=g8922.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS mRNA 2 83 . + . ID=g8922.t1;Parent=g8922;Name=g8922.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS exon 2 83 . + . ID=g8922.t1.exon1;Parent=g8922.t1 NODE_636_length_19860_cov_43.1238 AUGUSTUS CDS 2 83 . + 1 ID=cds.g8922.t1;Parent=g8922.t1 #PROT g8922.t1 g8922 HHHHHHHHHHHHHHHHHHHHHHHHHII # PASA_UPDATE: g8924.t1, single gene model update, valid-1, status:[pasa:asmbl_8602,status:3], valid-1 NODE_636_length_19860_cov_43.1238 . gene 3960 6160 . - . ID=g8924;Name=g8924.t1 NODE_636_length_19860_cov_43.1238 . mRNA 3960 6160 . - . ID=g8924.t1;Parent=g8924;Name=g8924.t1 NODE_636_length_19860_cov_43.1238 . five_prime_UTR 6029 6160 . - . ID=g8924.t1.utr5p1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 5936 6160 . - . ID=g8924.t1.exon1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 5936 6028 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 5697 5828 . - . ID=g8924.t1.exon2;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 5697 5828 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 5554 5621 . - . ID=g8924.t1.exon3;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 5554 5621 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 5406 5473 . - . ID=g8924.t1.exon4;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 5406 5473 . - 1 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 5157 5278 . - . ID=g8924.t1.exon5;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 5157 5278 . - 2 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 4892 5011 . - . ID=g8924.t1.exon6;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 4892 5011 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 4624 4764 . - . ID=g8924.t1.exon7;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 4624 4764 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . exon 3960 4292 . - . ID=g8924.t1.exon8;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . CDS 3993 4292 . - 0 ID=cds.g8924.t1;Parent=g8924.t1 NODE_636_length_19860_cov_43.1238 . three_prime_UTR 3960 3992 . - . ID=g8924.t1.utr3p1;Parent=g8924.t1 #PROT g8924.t1 g8924 MDWKHLVRRRCARAVLHYRRVVARTGLGTDRYAPAKISLALAGLFMVMFVAALWASEPRIANNKARTMEAPLKTEVSIIVPTFKEAENVKMLCERIFSVCREAGISAELIIVDDNSEDGTDVAVSELAVEYPVRLHTRRHARGLSSAVLLGFELAKYDTLVVMDADLSHPPETIPAIVQPILNGEVEFALGSRYTEGGGTKDWPLHRRIISYGATVLARPLVAVSDPMSGFFGIRRGTWLRATDLNPSGFKIALELLVKTQPRGVREIPYSFVDRLRGESKLKLKTQLQYALQVMRLYWRAFPLIFVVYALVALLSASFFAVGMLRLWCSSKQAGTAGGRPSHRSYV* # PASA_UPDATE: g8923.t1, single gene model update, valid-1, status:[pasa:asmbl_8601,status:12], valid-1 NODE_636_length_19860_cov_43.1238 . gene 576 3715 . - . ID=g8923;Name=g8923.t1 NODE_636_length_19860_cov_43.1238 . mRNA 576 3715 . - . ID=g8923.t1;Parent=g8923;Name=g8923.t1 NODE_636_length_19860_cov_43.1238 . five_prime_UTR 3663 3715 . - . ID=g8923.t1.utr5p1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 2823 3715 . - . ID=g8923.t1.exon1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 2823 3662 . - 0 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 2468 2663 . - . ID=g8923.t1.exon2;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 2468 2663 . - 0 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 1511 2361 . - . ID=g8923.t1.exon3;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 1511 2361 . - 2 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 1288 1414 . - . ID=g8923.t1.exon4;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 1288 1414 . - 0 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 1135 1152 . - . ID=g8923.t1.exon5;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 1135 1152 . - 2 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . exon 576 961 . - . ID=g8923.t1.exon6;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . CDS 675 961 . - 2 ID=cds.g8923.t1;Parent=g8923.t1 NODE_636_length_19860_cov_43.1238 . three_prime_UTR 576 674 . - . ID=g8923.t1.utr3p1;Parent=g8923.t1 #PROT g8923.t1 g8923 MLRSCVCVGRTAMRHGSLFAKSSATIVISRNFHYDALVSNLRAFRKANGDRPLSAAEKIVYSHLVDPTVKVERGETYLQLRPDRVALQDASAQTAVLQFMLTGLSTAAVPTSIHCDHLIVADGGAREDVSTAARDNREVFDFLETASNKYRIAFWKPGSGIIHQIVLENYAVPGGLMIGCDSHTPNAGGLGMIAIGVGGADAVDAMSSFPWELRAPRVLGVRLVGRLGPWASPKDVILRLAGMLTVKGGTGHVIEYFGPGVASLSCTGMATICNMGAEIGATCSLFPYTSAMATYLCATGRTSWATEADAFAPLLLHADEGCVYDDVVEIDLSSLEPHINGPYTPDLSTPISELKAASESRGWPKAISAALIGSCTNSSYEDMARAAAIAQQAIDRGIKPASEFLVTPGSERIRATCERDGILQVLENAGGRVLANACGPCIGQWNRKGLAKGESNSILSSFNRNFSARNDGNPGTHNFLASPEIVTAMAFGGSLSFNPLVDELTGADGLPFKFSPPPAVSLPPSGLASGMLPEPPASDIAADAVVRVDPKSQRLQLLEPFGPWDGRDLHNLTVLIKVVGKCTTDHISAAGAWLKYKGHLDNISENTLIGAVNAENGKMNSVYNRFTNSYDTVPSVARLYKERGLRWVIIGDENYGEGSAREHAAMQPRHLGGAAIICRSFARIHETNLKKQGILPFTFVAREHYDQVGPRDTLSIVGLDNLRPDSQVFLEITKAGTGHVYRLPLHHTLSANQIEWIKAGSALNYVAVSKNI* # PASA_UPDATE: g3016.t1, single gene model update, valid-1, status:[pasa:asmbl_8375,status:12], valid-1 NODE_5954_length_673_cov_102.314_potentialcontaminant . gene 4 673 . + . ID=g3016;Name=g3016.t1 NODE_5954_length_673_cov_102.314_potentialcontaminant . mRNA 4 673 . + . ID=g3016.t1;Parent=g3016;Name=g3016.t1 NODE_5954_length_673_cov_102.314_potentialcontaminant . five_prime_UTR 4 35 . + . ID=g3016.t1.utr5p1;Parent=g3016.t1 NODE_5954_length_673_cov_102.314_potentialcontaminant . exon 4 673 . + . ID=g3016.t1.exon1;Parent=g3016.t1 NODE_5954_length_673_cov_102.314_potentialcontaminant . CDS 36 673 . + 0 ID=cds.g3016.t1;Parent=g3016.t1;3_prime_partial=true #PROT g3016.t1 g3016 MAVGRGVLRRFAVVLIVTVAFILLTKHVRSPQYNSAPEANPSADAYKHDVAAKRDESRGAHEAELSHVEPPKNCVNGGVDVEGAAGVDPMRIAPLSAVPVRARHFEGSNMLSRLRIAVADSLNDDSRERCFAVTAASLFPFAFEYIEGKDDGSHVSEWMRNEYCRPHVRYTQPKFVLLVATCVHIPKPRMQEFVQAVVAVARDMEAVGAAAA # ORIGINAL: g2151.t1 original gene structure, not modified by PASA NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS gene 1611 4317 . - . ID=g2151;Name=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS mRNA 1611 4317 . - . ID=g2151.t1;Parent=g2151;Name=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 3977 4317 . - . ID=g2151.t1.exon1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 3977 4317 . - 0 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 3662 3833 . - . ID=g2151.t1.exon2;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 3662 3833 . - 1 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 3365 3478 . - . ID=g2151.t1.exon3;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 3365 3478 . - 0 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 2950 3093 . - . ID=g2151.t1.exon4;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 2950 3093 . - 0 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 2617 2827 . - . ID=g2151.t1.exon5;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 2617 2827 . - 0 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 2224 2411 . - . ID=g2151.t1.exon6;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 2224 2411 . - 2 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 1943 2040 . - . ID=g2151.t1.exon7;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 1943 2040 . - 0 ID=cds.g2151.t1;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 1611 1755 . - . ID=g2151.t1.exon8;Parent=g2151.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 1611 1755 . - 1 ID=cds.g2151.t1;Parent=g2151.t1 #PROT g2151.t1 g2151 MPTATAAASDRMPDSNGQATTDSGEKLTPEDHYARLLRLADATCALGRQVIAAKKRTQSASDRMPDSNGQATDSGEKLTPEDHYARLLRQADATCALGRQVIAAKRTQSAEHTRYIKRFETFCRRISKDPKVLNRQTPAVIRAFLTSVGHGDGLSLQEGHCKRLVKGRMPTAAKCDDAPWTENGSGAFQGNPTYSQDVRDFMSGFHRSLLAEGLAETSNRALTEDEMALLGQYHWDKYAAHTTAGDRGLAMQHLQAQTMNVVAFGMALCSNEVRMLTPGMFSFAKTRYLAANRTTDGPAAYAKLLERTKKLSIEDTLTLPSRKTNPTGACNPLPVFFEHSLNWRISMHHWLQVYFEEIDTAPADYLLFCQRDLVSGNPVLHNGKHKEMEMTHDQFFTRFSTALVDAKVCSREEAGEYGRHSFRRGGVQYHLTHNVDLDIVHSLEGWSPESTITLSCACTSAPSIAATTPN* # ORIGINAL: g2150.t1 original gene structure, not modified by PASA NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS gene 158 838 . - . ID=g2150;Name=g2150.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS mRNA 158 838 . - . ID=g2150.t1;Parent=g2150;Name=g2150.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 788 838 . - . ID=g2150.t1.exon1;Parent=g2150.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 788 838 . - 0 ID=cds.g2150.t1;Parent=g2150.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS exon 158 332 . - . ID=g2150.t1.exon2;Parent=g2150.t1 NODE_3011_length_4536_cov_40.6657_potentialcontaminant AUGUSTUS CDS 158 332 . - 0 ID=cds.g2150.t1;Parent=g2150.t1 #PROT g2150.t1 g2150 MAAANAELITTFYTCFQKRDAAGMVACYHDDIEFSDPAFVGLKGFRAGAMWRMLIERGKGDLTLEFSNVEADDNK # ORIGINAL: g3884.t1 original gene structure, not modified by PASA NODE_1716_length_9537_cov_38.7843 AUGUSTUS gene 1212 3387 . + . ID=g3884;Name=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS mRNA 1212 3387 . + . ID=g3884.t1;Parent=g3884;Name=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 1212 1892 . + . ID=g3884.t1.exon1;Parent=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 1212 1892 . + 0 ID=cds.g3884.t1;Parent=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 2159 2261 . + . ID=g3884.t1.exon2;Parent=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 2159 2261 . + 0 ID=cds.g3884.t1;Parent=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 3284 3387 . + . ID=g3884.t1.exon3;Parent=g3884.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 3284 3387 . + 2 ID=cds.g3884.t1;Parent=g3884.t1 #PROT g3884.t1 g3884 MASPAASGGGAQPVSCPQCAKMIGVKNLRRHLKVMHPTANANELFARAVASFSTIASTVRLDAQGRPRCPVLSCSRPLGFDSPASLAEHTGIYHRHLLVGDARRDSNNTHDRNIVENGHAPCIGMDFRDTAESVSVVHPPAVRVHLCDGADSTLSGGGVDMGGDDHAALARAPTKMMKKAKCRAKNPVDMKKIARCVCHVEGFGSAHYYRKTLMSHLRDDHDIVLPQKRRPHRASPSCKEGMCMSHMNVTVSANANASGSGAMTSANMENMLDDEGDVSDMDDEAAIGRGADVQG* # ORIGINAL: g3886.t1 original gene structure, not modified by PASA NODE_1716_length_9537_cov_38.7843 AUGUSTUS gene 7518 8927 . + . ID=g3886;Name=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS mRNA 7518 8927 . + . ID=g3886.t1;Parent=g3886;Name=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 7518 7707 . + . ID=g3886.t1.exon1;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 7518 7707 . + 0 ID=cds.g3886.t1;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 8080 8203 . + . ID=g3886.t1.exon2;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 8080 8203 . + 2 ID=cds.g3886.t1;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 8418 8565 . + . ID=g3886.t1.exon3;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 8418 8565 . + 1 ID=cds.g3886.t1;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 8787 8927 . + . ID=g3886.t1.exon4;Parent=g3886.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 8787 8927 . + 0 ID=cds.g3886.t1;Parent=g3886.t1 #PROT g3886.t1 g3886 MESVRAEGRGETGETGDAVSDRAFLDLQLVILRAPFTEKDILSADLVGAGKLPGPVVSDVLKRLNRTLQSQMNASFSHKRQRQLLENLQSLRASAAPTSVAPAASILSSLPDKWPTDDKASDASSRKKYADARLRLTSLSTSVTMAKEKKRQSEGLLSILRTLEGHVTAIGGETVGERLQKEMSVTKALGGLRARVRAYA* # ORIGINAL: g3885.t1 original gene structure, not modified by PASA NODE_1716_length_9537_cov_38.7843 AUGUSTUS gene 3967 6039 . - . ID=g3885;Name=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS mRNA 3967 6039 . - . ID=g3885.t1;Parent=g3885;Name=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 5633 6039 . - . ID=g3885.t1.exon1;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 5633 6039 . - 0 ID=cds.g3885.t1;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 5392 5474 . - . ID=g3885.t1.exon2;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 5392 5474 . - 1 ID=cds.g3885.t1;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 4732 5051 . - . ID=g3885.t1.exon3;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 4732 5051 . - 2 ID=cds.g3885.t1;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 4472 4556 . - . ID=g3885.t1.exon4;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 4472 4556 . - 0 ID=cds.g3885.t1;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 3967 4214 . - . ID=g3885.t1.exon5;Parent=g3885.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 3967 4214 . - 2 ID=cds.g3885.t1;Parent=g3885.t1 #PROT g3885.t1 g3885 MDFSNDIKPRRSFRTPKGYFASLLTTPPSNQSALASSRNIARHASTNAIATGNSSRAGIARYASSAGSIRKHEKRPTTAESSIGAKIAIRRSIGTFDELVAVAERAALLAQQGHGPRPNRAENGTGFAVFCGRMKRFLANQSLWKYARWTPDGSAILMVDRELGVSDDLDIRIAEAILTPPHQESHDALQSHFLLPTTTLESPPSPSCAASEPGTSCSLGDHVDARDPCIDSLLEQNSHLSELMARLDCGVPLSSLLPSFSVGTSAATSEVGILNAERGGVSEINESLKAAATDLCHFGGGVGGHTNELDPMDDCSNDDDINGDGNDTNDSGAPSKFAVYYALRDTFRGSCEVDGYVALPAEYVRAMFAEYEALVLFGSN* # ORIGINAL: g3883.t1 original gene structure, not modified by PASA NODE_1716_length_9537_cov_38.7843 AUGUSTUS gene 357 741 . - . ID=g3883;Name=g3883.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS mRNA 357 741 . - . ID=g3883.t1;Parent=g3883;Name=g3883.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 649 741 . - . ID=g3883.t1.exon1;Parent=g3883.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 649 741 . - 0 ID=cds.g3883.t1;Parent=g3883.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS exon 357 545 . - . ID=g3883.t1.exon2;Parent=g3883.t1 NODE_1716_length_9537_cov_38.7843 AUGUSTUS CDS 357 545 . - 0 ID=cds.g3883.t1;Parent=g3883.t1 #PROT g3883.t1 g3883 MPDTTAALTTVFDRIRNASYGVVSSRASAVHINESAIDEFVSSLKKDDYDSSVAFGRLPLKFPNVDSEINFIAVAALINFGSTYRADMYRYMQR # ORIGINAL: g12740.t1 original gene structure, not modified by PASA NODE_4266_length_1908_cov_41.0382 AUGUSTUS gene 216 1782 . - . ID=g12740;Name=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS mRNA 216 1782 . - . ID=g12740.t1;Parent=g12740;Name=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS exon 1494 1782 . - . ID=g12740.t1.exon1;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS CDS 1494 1782 . - 0 ID=cds.g12740.t1;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS exon 1134 1294 . - . ID=g12740.t1.exon2;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS CDS 1134 1294 . - 2 ID=cds.g12740.t1;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS exon 646 710 . - . ID=g12740.t1.exon3;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS CDS 646 710 . - 0 ID=cds.g12740.t1;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS exon 216 316 . - . ID=g12740.t1.exon4;Parent=g12740.t1 NODE_4266_length_1908_cov_41.0382 AUGUSTUS CDS 216 316 . - 1 ID=cds.g12740.t1;Parent=g12740.t1 #PROT g12740.t1 g12740 MHPPDKLRPNYSIRVSVMSALVACLLALAIAGAVQVITWNNHYRKLTTSDQNGLIIVWMLYKGMWHEEMINNRNKSVVRDMQWNADGQKICIVYEDGAVIVGSVDGNRIWGKELKGTTLTNVCWAPDSKNILFGTGRGEVHLYDGTGNFVSKVALPCLENIAGVTPLSGMAWYDGAEGYVENKCPTLAVCFENGRMQIMRNESDE # ORIGINAL: g12980.t1 original gene structure, not modified by PASA NODE_481_length_22831_cov_39.5946 AUGUSTUS gene 4966 9734 . - . ID=g12980;Name=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS mRNA 4966 9734 . - . ID=g12980.t1;Parent=g12980;Name=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 9216 9734 . - . ID=g12980.t1.exon1;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 9216 9734 . - 0 ID=cds.g12980.t1;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 6537 8963 . - . ID=g12980.t1.exon2;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 6537 8963 . - 0 ID=cds.g12980.t1;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 6150 6321 . - . ID=g12980.t1.exon3;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 6150 6321 . - 0 ID=cds.g12980.t1;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 4966 5972 . - . ID=g12980.t1.exon4;Parent=g12980.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 4966 5972 . - 2 ID=cds.g12980.t1;Parent=g12980.t1 #PROT g12980.t1 g12980 MSVCGRRAVGGRSLTLVGLFLLLVFCGYMAVFESYLVSVGGRFSELSEDTFETLAAVGLGRAAIDHHGAALSIGARDVVERWHVDPDSLHELRTGWSAASGVPHAVALFVVGTPEEALRLVMPYMEMRRRGANSTVLTFLCAAGPRTSEISAVLDIFGVIPDVSVELDLTDEQNDVAVNARARPMPATEFARAIAVMESIMARTSPSVVVVDGVRQIAFAASVAAFYRKIKVVASAMGLPDSLAREFDELNPIRGTFPRQCVLTIASYLLARNYDQLPKKLLITSRADIFNIGTTTLDGALFVRNVTASDLRVGGARPPPTEQTGLLVDGIRTLLPPIGSATGATQLLVRLLRGDVDGHKLTVLLRLSERPPDGIANHTVYYVRIFETLGKLFVGSRHAYLVVVGQLPRVAQAACMHFVGEHANTLLVSEPPGVRWWMNMLSHAHIGITDAESAREDFAAFSMTNFWLLSEPDLVGTGFVVGSFLRTIQAMLSKALGDIATKGDTGTPFAPTSNAYRSPTNAYADIVLAVALEAASRPNATEPTLLGRLRQKMLSTRAGGAIAAAAAAAAGGDASDANGSGDGSVFAGNGTPVAWEDYVPARGTYKLPAFQPSRFAEAPRSPDVSVVIPCFNGMPFMKMAMESLLYQTHANFEAIVVDDGSTDDSVRYVESLGDARFRVVTGEHAGLPTALNTGLRAAKAPLLTWGSADNVFLPRFIERLIDLFREFPEAGFGHGQYYSIDSTNAIKSGIGDNRVITPFEMLYYWPGLASFMWRRSAFAAVGFFDTDLTGVEDWDYWLRIVELFPAIPRTTAGLYLYRVHAAQMTQSMGKAGLIAQAETRMIQKIEVRHGGSLDPVKLMPQLKMCSDQTRAHTIGNFLLGYATMFARPSLRVHLMRKEVLRGFFDRALSFDSSYRPAGICLGKALGLSGEWEKLATHLSVFRTRFESQITVPERTMLNHLNNFLAARQITMFRVISCGTSQMMATEELMVREKELTDIYTRVFTKKPIVLPSPDRPYRLAVVVALPISKYLELSDGKLKEYFNPLGFFDEVFVLIMNGKDSDQSVVQGLQVLPVAEADYIAVIQQIKVHVVRAFGGGAACTFATRRPVPGVKVVCSVSGDETEDGPCCGIGLPTADFVWPLSLIAAEIVSVKSIVPPEKIWRMSTRVAPDRFKVDLYASEFANFRATFLERFPIKIRIVHIADPVMQESPLALLYALKELDGQFGLIALGQNQTNAEKVMATAKLIGVEERVFFALADRQELPFYLRMADIYATALGTNSAEAFAAGCAIVAPLDGQAPMRGRIVHERNGLVTVFGHAPSLAAELRRAAGDSELRKRLVSGARDSALFYHGIDSVDRWEVSMYRLAVMRAIASR* # ORIGINAL: g12979.t1 original gene structure, not modified by PASA NODE_481_length_22831_cov_39.5946 AUGUSTUS gene 2666 4413 . + . ID=g12979;Name=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS mRNA 2666 4413 . + . ID=g12979.t1;Parent=g12979;Name=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 2666 3389 . + . ID=g12979.t1.exon1;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 2666 3389 . + 0 ID=cds.g12979.t1;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 3551 3669 . + . ID=g12979.t1.exon2;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 3551 3669 . + 2 ID=cds.g12979.t1;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 3860 3956 . + . ID=g12979.t1.exon3;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 3860 3956 . + 0 ID=cds.g12979.t1;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 4259 4413 . + . ID=g12979.t1.exon4;Parent=g12979.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 4259 4413 . + 2 ID=cds.g12979.t1;Parent=g12979.t1 #PROT g12979.t1 g12979 MADCVSPSRAFRWGLVVMDGFASNRTPSADRDFNELVSHAVSQAASACTDGLIVLTARGNGGGCLSLGSVSLGRIEAYLMAAYASASAVALARDQPFFACDVVFEETEPYPSIARPEIEALFFCASDLSADFDCSHSALLGNRPSSLGPLQVVLVDGHQAACAANLDAHTKLPNAAQMPVSANEAALVARDAEATHTPTALAFGHRSCCLGGTFDHLHAGHKVLLTVAALAATHRMVCGVTGDALLKYKKFATALEPLETRITSVLSFLGRIRNLSVFHVETPEIVDVYGPAGTDPDLQIIIVSEETSAGAVTINDKRAESGLAALAVHVIGLIGESGGQSRDKLSSTMLRDWQLRHTGHSALH* # PASA_UPDATE: g12982.t1, single gene model update, valid-1, status:[pasa:asmbl_7649,status:12],[pasa:asmbl_7650,status:12], valid-1 NODE_481_length_22831_cov_39.5946 . gene 13640 17322 . - . ID=g12982;Name=g12982.t1 NODE_481_length_22831_cov_39.5946 . mRNA 13640 17322 . - . ID=g12982.t1;Parent=g12982;Name=g12982.t1 NODE_481_length_22831_cov_39.5946 . five_prime_UTR 17192 17322 . - . ID=g12982.t1.utr5p1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 17148 17322 . - . ID=g12982.t1.exon1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 17148 17191 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 16589 16823 . - . ID=g12982.t1.exon2;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 16589 16823 . - 1 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 16304 16372 . - . ID=g12982.t1.exon3;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 16304 16372 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 15946 16047 . - . ID=g12982.t1.exon4;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 15946 16047 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 15013 15117 . - . ID=g12982.t1.exon5;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 15013 15117 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 14686 14799 . - . ID=g12982.t1.exon6;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 14686 14799 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . exon 13640 14356 . - . ID=g12982.t1.exon7;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . CDS 13892 14356 . - 0 ID=cds.g12982.t1;Parent=g12982.t1 NODE_481_length_22831_cov_39.5946 . three_prime_UTR 13640 13891 . - . ID=g12982.t1.utr3p1;Parent=g12982.t1 #PROT g12982.t1 g12982 MALLRRLSNSDIRGSDQQARFLFHKIGVVEKAFAGIYIDVMGVARKSGRLRNKFDSLGRHLMLYAENETPGIRMSMSAVAEIMSQVQDFRQQEIERLEHKVLQPLKMYKTHCKTAKDELKTRESAKEKELSKQRALDKLQIKDPNNRAKIAKLDLAGATTEVNHANKTLAENMERFEQKKIADIKMIMAEFIHTEMLFHARALEMYTKARAALEAINEHDDMQEMIMQMRPARMQQMPTAGMPGNGGYGDNGLEDSLASGMFGQGANMGASYGGGSVASGYGGYGGQGQQVQGLGGNDGYGRDRAMSFGQSGQMQPMQQSGHGQGIGYGGMGGVGHGNAGGFAGNSSLQSGSFSYGGGMGGGMGGQGVDLGASQALY* # ORIGINAL: g12978.t1 original gene structure, not modified by PASA NODE_481_length_22831_cov_39.5946 AUGUSTUS gene 76 2214 . - . ID=g12978;Name=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS mRNA 76 2214 . - . ID=g12978.t1;Parent=g12978;Name=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 1876 2214 . - . ID=g12978.t1.exon1;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 1876 2214 . - 0 ID=cds.g12978.t1;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 1430 1769 . - . ID=g12978.t1.exon2;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 1430 1769 . - 0 ID=cds.g12978.t1;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 949 1105 . - . ID=g12978.t1.exon3;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 949 1105 . - 2 ID=cds.g12978.t1;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 629 772 . - . ID=g12978.t1.exon4;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 629 772 . - 1 ID=cds.g12978.t1;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS exon 76 262 . - . ID=g12978.t1.exon5;Parent=g12978.t1 NODE_481_length_22831_cov_39.5946 AUGUSTUS CDS 76 262 . - 1 ID=cds.g12978.t1;Parent=g12978.t1 #PROT g12978.t1 g12978 MASANGTCVPGDAACGLPTGGIMAGADEALCPIVLMRDPSDWWKSVLVYVVPFVALVLGVVAARTIRSIYYMLTRVSPEKQWARQVRFLHGKGTWLRRLRVKMHVSSKIGITWNVFQMCITIFSCLLYVAETYTGLLACNSSAPTIIFALEAVVTVAFIVDYVIQFVMARDRLSHIFTFYAIVDFISIMPFFVNLVIKNYEALELPRLLRVVKVLRNYRLMSFGRSEIEREATALVMMIFGMIFLSASLINFVERYSAGWDSHMVYWHDSLYFMVVTYSTVGYGDITAANAYTRMVDCALIILGVFFISSQTTKLVTLLMSHSPYKSDSYATVKGGSSHVIIIGEVTAIGLRNFVREFFSNSHSQKDMRVVIMGDDLPSTDVEAILKHQ # PASA_UPDATE: g12984.t1, single gene model update, valid-1, status:[pasa:asmbl_7653,status:12], valid-1 NODE_481_length_22831_cov_39.5946 . gene 19586 22669 . + . ID=g12984;Name=g12984.t1 NODE_481_length_22831_cov_39.5946 . mRNA 19586 22669 . + . ID=g12984.t1;Parent=g12984;Name=g12984.t1 NODE_481_length_22831_cov_39.5946 . five_prime_UTR 19586 19862 . + . ID=g12984.t1.utr5p1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 19586 20132 . + . ID=g12984.t1.exon1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 19863 20132 . + 0 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 20335 20520 . + . ID=g12984.t1.exon2;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 20335 20520 . + 0 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 20847 20922 . + . ID=g12984.t1.exon3;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 20847 20922 . + 0 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 21453 21551 . + . ID=g12984.t1.exon4;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 21453 21551 . + 2 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 21861 21964 . + . ID=g12984.t1.exon5;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 21861 21964 . + 2 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 22293 22392 . + . ID=g12984.t1.exon6;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 22293 22392 . + 0 ID=cds.g12984.t1;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . exon 22623 22669 . + . ID=g12984.t1.exon7;Parent=g12984.t1 NODE_481_length_22831_cov_39.5946 . CDS 22623 22669 . + 2 ID=cds.g12984.t1;Parent=g12984.t1 #PROT g12984.t1 g12984 MNAEGAKLVAALEGYRIEGTPSATDATAEPPGTLLDSERNLKFHTKYFEGSPRAGSEHAVLLGTAKPSGPVVISLVLDGTTYHGLYRSTQGFKLNSVDADTIPFPWYRRLFGLGRDRLVIASALFGSEQLPSLREVRDTAVFAAVKGIDEKQVIKTYKFAVLYAKDGQASEEEMFANSSVSAAFDEFLGIIGDRVKLEGFTGFRGALDVKTNTTGTHSVYKKWRDYEIMYHVSTLLPSKEGDTQQIERKRHLGNDIILIVFKEGNTLYRPDTIKSQQTHVILVVSPEGSDKYR* # PASA_UPDATE: g12981.t1, single gene model update, valid-1, status:[pasa:asmbl_7652,status:12], valid-1 NODE_481_length_22831_cov_39.5946 . gene 10851 12818 . + . ID=g12981;Name=g12981.t1 NODE_481_length_22831_cov_39.5946 . mRNA 10851 12818 . + . ID=g12981.t1;Parent=g12981;Name=g12981.t1 NODE_481_length_22831_cov_39.5946 . five_prime_UTR 10851 10909 . + . ID=g12981.t1.utr5p1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . exon 10851 11139 . + . ID=g12981.t1.exon1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . CDS 10910 11139 . + 0 ID=cds.g12981.t1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . exon 11391 11531 . + . ID=g12981.t1.exon2;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . CDS 11391 11531 . + 1 ID=cds.g12981.t1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . exon 11754 12315 . + . ID=g12981.t1.exon3;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . CDS 11754 12315 . + 1 ID=cds.g12981.t1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . exon 12407 12611 . + . ID=g12981.t1.exon4;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . CDS 12407 12611 . + 0 ID=cds.g12981.t1;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . exon 12760 12818 . + . ID=g12981.t1.exon5;Parent=g12981.t1 NODE_481_length_22831_cov_39.5946 . CDS 12760 12818 . + 2 ID=cds.g12981.t1;Parent=g12981.t1 #PROT g12981.t1 g12981 MLFFGEFSAADVPLSELVAFLAPPGTGDRRGNDHALGGVSGVPSSEAYLHRPFTWTTSIESLDGIISFSEQDSAGSKEVALGHKSGSGSLADFRVLNASWMFADCVLVTAENIRREHSVVCYSRFAEMEEYRTDVLRKRWRRPLQAVVTMTTDVDVDHAIFASSGSETPGCVVYTTEQGSVILSRRFVDAGYVVTDNVASISRNAESAMDANAPREQNRPPSARPAANCTSGSPQVAGSVTVGESYDIFYHNGVSEESRHPSAHTNATATALSMSGQQRHVAVVGVAMAAHGEGIDLSLVVKDLRERQGVQMFRLHIPYARAIFIRLTSLWVVPHGALQHLDVSGGGRLIASLLEAGLIDEMRITIAGQLCGPTNAAGDGAADGYQSNVQPSAVGPGK* # PASA_UPDATE: g12983.t1, single gene model update, valid-1, status:[pasa:asmbl_7654,status:12], valid-1 NODE_481_length_22831_cov_39.5946 . gene 17453 18929 . - . ID=g12983;Name=g12983.t1 NODE_481_length_22831_cov_39.5946 . mRNA 17453 18929 . - . ID=g12983.t1;Parent=g12983;Name=g12983.t1 NODE_481_length_22831_cov_39.5946 . exon 18907 18929 . - . ID=g12983.t1.exon1;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . CDS 18907 18929 . - 0 ID=cds.g12983.t1;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . exon 18506 18674 . - . ID=g12983.t1.exon2;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . CDS 18506 18674 . - 1 ID=cds.g12983.t1;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . exon 18054 18125 . - . ID=g12983.t1.exon3;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . CDS 18054 18125 . - 0 ID=cds.g12983.t1;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . exon 17453 17800 . - . ID=g12983.t1.exon4;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . CDS 17642 17800 . - 0 ID=cds.g12983.t1;Parent=g12983.t1 NODE_481_length_22831_cov_39.5946 . three_prime_UTR 17453 17641 . - . ID=g12983.t1.utr3p1;Parent=g12983.t1 #PROT g12983.t1 g12983 MEAHLELSTRGFCVRSFGTGANVRLPGPSVDQPNVYPFTTSYRQIYDDLLHKDPQLYTQNGILDVLENMEARPRRTSRAVHILNMDVKDNHEEAAVGAKLIAELAQQIESADDLEDSMEDILAAFQQRHGRELMHSVAFY* # PASA_UPDATE: g10758.t1, single gene model update, valid-1, status:[pasa:asmbl_5028,status:3], valid-1 NODE_279_length_28348_cov_40.9216 . gene 12754 14097 . + . ID=g10758;Name=g10758.t1 NODE_279_length_28348_cov_40.9216 . mRNA 12754 14097 . + . ID=g10758.t1;Parent=g10758;Name=g10758.t1 NODE_279_length_28348_cov_40.9216 . five_prime_UTR 12754 12812 . + . ID=g10758.t1.utr5p1;Parent=g10758.t1 NODE_279_length_28348_cov_40.9216 . exon 12754 14097 . + . ID=g10758.t1.exon1;Parent=g10758.t1 NODE_279_length_28348_cov_40.9216 . CDS 12813 13904 . + 0 ID=cds.g10758.t1;Parent=g10758.t1 NODE_279_length_28348_cov_40.9216 . three_prime_UTR 13905 14097 . + . ID=g10758.t1.utr3p1;Parent=g10758.t1 #PROT g10758.t1 g10758 MATWNSKLDKAVGQYYYSLPIPEGKTLVEYIWIDGSGQNLRSKTRTLDFIPTDPTQLPLWNFDGSSTKQASGHDSDVYIKPVALFSDPFRRGNHKLAICETYLHTGVPHPTNKRHSCAANMIKAKDEHIWFGIEQEYTLYDTHGQPFGWPRGGFPGPQGPYYCGVGTDKVYGRDLVEAHYFACLYAGVKICGINAEVMPSQWEFQVGPCEGIDMGDHMWAARFIMHRVSEDFGIVVSFDPKPMEGDWNGAGCHTNVSTESMRKDGGLEHIKAAIAKLEKRHKEHIEQYDPNGGEDNKRRLTGRHETASITQFSSGVANRGCSIRIPRQVGEEGKGYFEDRRPASNCDPYAVTDRMVRTIVLNE* # PASA_UPDATE: g10757.t1, single gene model update, valid-1, status:[pasa:asmbl_5031,status:12],[pasa:asmbl_5032,status:12], valid-1 NODE_279_length_28348_cov_40.9216 . gene 7826 11102 . + . ID=g10757;Name=g10757.t1 NODE_279_length_28348_cov_40.9216 . mRNA 7826 11102 . + . ID=g10757.t1;Parent=g10757;Name=g10757.t1 NODE_279_length_28348_cov_40.9216 . five_prime_UTR 7826 8232 . + . ID=g10757.t1.utr5p1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . exon 7826 9597 . + . ID=g10757.t1.exon1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . CDS 8233 9597 . + 0 ID=cds.g10757.t1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . exon 9751 10022 . + . ID=g10757.t1.exon2;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . CDS 9751 10022 . + 0 ID=cds.g10757.t1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . exon 10253 10446 . + . ID=g10757.t1.exon3;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . CDS 10253 10446 . + 1 ID=cds.g10757.t1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . exon 10577 10719 . + . ID=g10757.t1.exon4;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . CDS 10577 10719 . + 2 ID=cds.g10757.t1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . exon 10821 11102 . + . ID=g10757.t1.exon5;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . CDS 10821 10940 . + 0 ID=cds.g10757.t1;Parent=g10757.t1 NODE_279_length_28348_cov_40.9216 . three_prime_UTR 10941 11102 . + . ID=g10757.t1.utr3p1;Parent=g10757.t1 #PROT g10757.t1 g10757 MDALRLRSGVGQRVHLNPLVFAALVIGIVCGVLLGGLVSNATGNCPQRQICVCPDRSQVLGPIAIQHSVPSAEDSLIRPPVIVKSDTEIARGPLVHPSPSTTTAVAAGQPDGPLAGIKLTASAAHDAFVDRQAIPQVDDDNSPPPAVPLPAAVTLFGTPSATTNTGIVKQTQMPDKPVTTTQKSTEFGAAPPPVTEDAETVQSEAPDRLLITDVCQWGFTNELMAVVAAVNIARDLGRSLVEPVLCNLDTPRPDSRPVGVFAPLSAYFNLTNIECFLTSGVLTENSRCIQKPEGPVESSVARVHTPRPPVIMLANLPYMLRRIATPATPATPMESEDAQGVAGAAARVTRWLASWATLSAAVSSDGTGNDVHRAAASTLPVVRSDSVDQSQSQQQQASEDGSGSLNQRTEWRIPCVIFSGLSGLQPLDVEHAPVLAQLLNASCASATAIVPLKEPNASVSWLHHYGQVPLGNVAIDQAAVAIAASAHPLPPYATAPVVATWWLFSADRSRKPTRGEMMFTLADLEPRAEVLELTRFFIDRLGGPGGYVSGHVRLGDFETVCRWTPHPCGVNSSLVPTTMAKAAIAHQVTSFFIATDGSPDQVDAMRRGLEAIVPASSTILITLRDHTDIIEELSQKLPFSAVGALLQMIEKLIIACGKVVFYSTGSTFSSQATTIGRFLRDCERPRGYATFPTFNGL* # PASA_UPDATE: g10759.t1, single gene model update, valid-1, status:[pasa:asmbl_5029,status:12], valid-1 NODE_279_length_28348_cov_40.9216 . gene 14663 28105 . + . ID=g10759;Name=g10759.t1 NODE_279_length_28348_cov_40.9216 . mRNA 14663 28105 . + . ID=g10759.t1;Parent=g10759;Name=g10759.t1 NODE_279_length_28348_cov_40.9216 . five_prime_UTR 14663 15055 . + . ID=g10759.t1.utr5p1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . exon 14663 20905 . + . ID=g10759.t1.exon1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . CDS 15056 20905 . + 0 ID=cds.g10759.t1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . exon 21140 21454 . + . ID=g10759.t1.exon2;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . CDS 21140 21454 . + 0 ID=cds.g10759.t1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . exon 21691 22578 . + . ID=g10759.t1.exon3;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . CDS 21691 22578 . + 0 ID=cds.g10759.t1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . exon 22780 27757 . + . ID=g10759.t1.exon4;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . CDS 22780 27757 . + 0 ID=cds.g10759.t1;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . exon 27996 28105 . + . ID=g10759.t1.exon5;Parent=g10759.t1 NODE_279_length_28348_cov_40.9216 . CDS 27996 28105 . + 2 ID=cds.g10759.t1;Parent=g10759.t1 #PROT g10759.t1 g10759 MEQRGRGSGRGVKSSRGSNQRHTSPRSQPSTAVDAAGYADLAEAAPPVHTVLSHPSSPRTSPHVPQEQAAAVRQLYVPEPHSQPNSAHAHDDRGRLSRGSSMPVRGSPSRVRGDRTVPPSVARDGVRSAGTVAQRRDRDASPGTESRWEARDSAGRMPRTDAPGKKDADASVRDEGNRSGVYARNERSGSKRGGGGAGAAGDAVVVKQGPIRDSRHGGKIYVFGDKNDPVLARLNALLSAALDGGQLSSVASLEAFFVDRGSTDIMDAKIASVVGAIGANVTDANAPHLNIAPALGRALGAVCAARGGRTASAVLAWATRLLSSFGGGTDAGVLCALSCIEVALEGRGDEIHTRAVATAHSAATATAATAGDTKPSVHDVVPSASVASIASAMRIFLLGDISAHLLRASFLSLRLLAERYSVNFAPVFRDAVDVLVGWLSDTTTSSEMAAEITALLCRCRQRFAADSMLGITLLDQILADIEGVLSETPRTATDAPAFALSKAIKIARPNNTQAAEGTADAESAPLLSSSPSKASGVGAERASRTDTDRISGARAQDRFIAYCRCFHAIAEGLGDRLHSAVAFSASQGPSGQLVTRLIAAASVAATRYCSWDACKGVNAAIVTCAVHLKHHFAAHAISAAELFLTEPLLCGVSGGKVSDFIGLWADSLRVTAASVGAALPVGFAKAVLHSGSPLVAVGTSDGAEAGQAVAAVCAALMSSRSIACAEYSQQQMCALLDASFVLLREAASTATSADSMDVEGLLSAPTVVSAEKTVVFCVRAFAAKQGPSGTSSVAALLNSLPSSVSVLKALVDLDVFRVFPRVAESIVGGMRRAHTTAALPRDPGTTAVNPLSIAMAPPDDPQRNRQGIQILAPPKPTKSSDTAPHSHEAAEADDSTKSLVRMLGGLVGDKRVPPLVRRIALEWLPELLELQLGRRPRSAQQQIQSQRDVPSNLEIDAPWDASTWALLAGVAQVAIEASADADPLMRVAAARYLSSVRRAVACAINDADEGRLHLNAELARIVCCCVPRLSDEHDGVARAFVSLLSSIPPGIIASAHSKIGTALSFELLSATIKLTSGGDLPAGLLEACIAFVLSTSTPAPAVAASSPPSMSLTGSPFVRVIDELLSRNVRSPVLLDGLRRSLSSRLASAQLALVECARQCVAQRLNVPLVDHSGANAANVSQTAGGTNPMVFFSALERAFREYAALAAKAAEDDSSSARERQQQQQHPQQQHQQHVTQPASQNASTPQTAVSLGRRDRAVLLLSFVGSVERMMFSAAEGCLTVPRALSPASQFFFRMNRRMWTESLSRNRLQMAYTALAAGASASTVFHGFERLAELSEAVKFGPPRERQRHRTEFERCALLVGSALVRLRDADAVAGLAAWARELFATPSTAAGATAPDDKVEEIAASTADPKWLAWVDGALLEAQGKYEAALSAYNTALTLLVAPEGPSANAPNVALAATSALESDPLVAQYLVDRIAECYSRLTDWEGMRRWQTTLQTHRTAPSSAGLLNVQRALKVRRDPHVIKALERFDVADYSGVRGALELAANEHHPDSLCDVSALVSAQQRFLVESMGLIAQHGPSVNAAQQRSLIGNALASARSAALAGLSVSVAESLQEAIPFANGMRLAAAIESVAAGKPLEAGLPLLRDLVGICGGSSGLDPSVHEAGMWNDALRVIRFAASRVPADAAVDRDAGDGVRAALTSLTTVAAKLARKQGNMHLAHRLLLSESATSLAANFERAKLLFARGRHVEAVTQMASVAKKALTASVPSSVVSAAPLTPSLGQGGSASASAALVSAKAYRSLSKWLLIERVVARKRDELLAAVAPAVASGVLPQIAAGLQFAGVGKTAQQEGEMQNGSVAGSDDAVDYVAGACSYLATMARVAGYPKVWAEFAGWCYRRGRRYVERVDDGRGGPGGVDLHSEDERRLRDAVVAAIGDGPVADEMSQRLIRLVQQAPPPPPKQRPAESADTSAQHTACVTHDSLREARLAAMTDVVGAILSQQHAEAAAGSVAQVWLDARDRAMGLYAIAANAYLNYLRTGAGAVVFAREGEVGESSLPSNASPLATPRPSENDADPLADAARTGAAGAAHHVIASLRLLRLVTRHGDELPPAFYESLGLTPTGAWETIVPQMLARMGHADERARTRIATLLVRVAKASPHLMAYPVISELMEEEEAARSLSPGDDGSTRSASGRLSAADLAPLSRALCQQVPTLVHELRYGITELRRLAVLWEEEWTEALYRAQADAIHRLRRLDEDARRVFDNPTLTDGERRVIMLSSHAAVMHPVSVALERVRASTYEQSAHSTGTPHEKRFVDSFAAEIDAALAQLNAPADIRVPSSVWGPFKKLLRGLGEFSQRWRVLDMADVSPRLAAMKDTPLPLPGDASGSAKIDRFDGTVTVLKTKTHPKKIALSANDGTAHSFLLKGTEDLHLDERVMQFLSVINTMLACDSSPNARKYEGGRYALMRARTYAVVPLAAKCGLIRWVDGATPLFALYKAWFAREASNRARDGSSSRTQHDAHMQPSNLRRDATNNDDGPRVGGGGRRRGQSSAAGGRGRGRHNAASGATHSTAAQPTAVQPRQIQLQLARSTSLPASTAGADADCDADERTPDATESAKDEESLKEMHEAEDDAVNAIMPRPADIYFAKMAPALREKGVSDLGDRDKWPRGVARRVYEELLSETPSDLVSRELFCASGSAAHWWESTKSIARTTAVMSVVGYIIGLGDRHLDNILVDLERAEIVHIDYNVCFERGLRLRVPERVPFRLTQNIERAFGHTGCEGVFRLSCERAMATLRRGREALLTLLDAFVYDPLVDWTAGRALEAERRGMELAIGLSLLSTRLAEVRTLFGDALSGVTAALDGLKQTLPAAAVSRQQEVLLVAALADAERESSELSAALEDSVPQAVAELKCVRADVERARGELLSAQSVGAELAGQLAAPTDAASECRAIADAAGARVVGVFFADMEQQPTTLPLDAELARADGVLRAAGGGASVAALQQLIAESDAHAEHRRVCLSRCLQFLQAYLGTVSHMPVKDVLAQSRSHAFASALSELVSCASAALDSNIGGGWHAGMMERVAIAAAAAESTAAGIDMIECDRRTSEAEARLCALLECARERVRELGDAQQLYVPSVASTSIASVKEARDAVLSEGASLQAVYVAATAELVRLRVCVRSEERALTGTHVHAEPHPNGGGADADCAPRIVGSAALIASVPSSGLMAVGKAALSVADVCFAASAGIQDRDAVAGGDYALAKATIRVYESVYEAVVRYDSILLPELMSAVRSGDASVSESLSALCSLSHDADAALACVDGDELLTVDGNNTLNMRKLRGSYAALIRTGIRHSASAHAADRGATGGGGGRVLLAAFDALFASMDKTVRELREVIRAADNNNSIGVGRESCAITSLPENAASDALDDAFFVLKLRSIARCIASARALSSLSLCGPFAFAFSSGDRRGESESASLLYREPVVVYARNMLERRVAGVLDAALDRMARSFVASAAVLSAREGIATAHGMVSESLSTLLAANGAEEGALGVFIESTCAALNVNATAADDSRRILGELAEGVRVFYLGQCHTTALRGAIGRSTHAEDAAASLYFASMPLVARWGEAGPLAQLLQLPVPKTLIESIQSSAALMIQAESFLRAVDERQRALEADVVTALKWSATADALALQQALAARRSLVAAEAERIGSVGWLCDVILRFEGRRSAELSRGPASGGLDREASVAASQLACALRLFDGAWKRLSAAETRLAPIARLVGHDELSSMHLGVVGVVPIELDLGELASVRVAELSSVVSDTGAALASVRRELGETLYPPLLSHASVLATFSSNMELAAREIRPSLSAIASAAEKIDSALAKSVREQSVQLTESLQRIPRELNSLARSIFVEVSADNNDDSNKKDTADADSDDSINPSNKKSHFSTSQEARISLGHGGGNAKLLLRMSADVTDNCHSTVLPVIDELAASLGSMQAALSALASTRVDGAGAVGGAEDAQRASQRDRRADRNAHALGAWKRVKAKLDGRDFDPNRKLTVAQQVR* # PASA_UPDATE: g10755.t1, single gene model update, valid-1, status:[pasa:asmbl_5027,status:12],[pasa:asmbl_5030,status:12], valid-1 NODE_279_length_28348_cov_40.9216 . gene 165 2850 . + . ID=g10755;Name=g10755.t1 NODE_279_length_28348_cov_40.9216 . mRNA 165 2850 . + . ID=g10755.t1;Parent=g10755;Name=g10755.t1 NODE_279_length_28348_cov_40.9216 . five_prime_UTR 165 165 . + . ID=g10755.t1.utr5p1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 165 274 . + . ID=g10755.t1.exon1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 166 274 . + 0 ID=cds.g10755.t1;Parent=g10755.t1;5_prime_partial=true NODE_279_length_28348_cov_40.9216 . exon 467 534 . + . ID=g10755.t1.exon2;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 467 534 . + 2 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 906 1007 . + . ID=g10755.t1.exon3;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 906 1007 . + 0 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 1245 1353 . + . ID=g10755.t1.exon4;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 1245 1353 . + 0 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 1560 1756 . + . ID=g10755.t1.exon5;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 1560 1756 . + 2 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 1977 2163 . + . ID=g10755.t1.exon6;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 1977 2163 . + 0 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . exon 2502 2850 . + . ID=g10755.t1.exon7;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . CDS 2502 2635 . + 2 ID=cds.g10755.t1;Parent=g10755.t1 NODE_279_length_28348_cov_40.9216 . three_prime_UTR 2636 2850 . + . ID=g10755.t1.utr3p1;Parent=g10755.t1 #PROT g10755.t1 g10755 LSDVLKSESLDISPFDRRGDDPTGALWRRFCRLIKHGVICDIVLLEECCRANIGDITFQEAYNRTKRILNITVNSTKQFEMPRLLNYLTAPNVVIWSAACASCALTGLFSPVELMAKDSAGRIVPWNPSGQKWSDGSVESDLPMARLSELFNVNHFVVSQVNPHVVPFLHRSSPLTMLPKVRGLATSELKHRLVQMGKLGVLPRTLNNLRTIIDQKYEGDITIVPTVRLCDYLSLVSNPTTEYIDRGIEVGQLATWEKVSVIRNHLAIELTLDRILARLRKKLFETADGRSGKHGPKSVGM* # ORIGINAL: g10756.t1 original gene structure, not modified by PASA NODE_279_length_28348_cov_40.9216 AUGUSTUS gene 3159 6937 . - . ID=g10756;Name=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS mRNA 3159 6937 . - . ID=g10756.t1;Parent=g10756;Name=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 6493 6937 . - . ID=g10756.t1.exon1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 6493 6937 . - 0 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 5783 6270 . - . ID=g10756.t1.exon2;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 5783 6270 . - 2 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 5362 5537 . - . ID=g10756.t1.exon3;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 5362 5537 . - 0 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 4902 5061 . - . ID=g10756.t1.exon4;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 4902 5061 . - 1 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 4292 4531 . - . ID=g10756.t1.exon5;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 4292 4531 . - 0 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 3927 4056 . - . ID=g10756.t1.exon6;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 3927 4056 . - 0 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 3556 3746 . - . ID=g10756.t1.exon7;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 3556 3746 . - 2 ID=cds.g10756.t1;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS exon 3159 3308 . - . ID=g10756.t1.exon8;Parent=g10756.t1 NODE_279_length_28348_cov_40.9216 AUGUSTUS CDS 3159 3308 . - 0 ID=cds.g10756.t1;Parent=g10756.t1 #PROT g10756.t1 g10756 MDALQPGHPPGFDMTSGSIAARPHSPDAHNTLHAGNLHSLDSSSPAAVLRPPQSPTVQPPSPSTDGVTIEPSVSNHVESGDRRMNTPGHVLGPRQPRARLSVVHESDSMSPATRLLAEEVAKMRLAPGLTESIHNRVRSESSRYEQVFGGTQDDLFRTFEDRITHTVSKTDFLKALGATGLWLNDRRLKESVSLLSNASENMDSEEFRKCISPNIYLIDRAFQGDFIVPDFSRLRSEIEAMYLDVRKITDGRVATYIPQLGRVNPNQFGVSVCTIDGQRMSFGESNVEFCVQSCCKPLNYCLALEEHGEDKVHAHVGREPSGRHFNELALNREGKPHNPMINSGAIMMCALVQPNLDISDRFDYVMQAYSKMAGNSKVAFNNAVYLSERQTADRNFALAYLLRENGAFPKGTDLQETLEFYFQCCSIEMTCESLSVIAGTLANGGTCPITGERIMSSEAARSCLSLMYSCGMYDYSGEFAFTVGLPAKSGVAGALLIVVPNVMGICTWSPALDTHGNSVRGVEFCKRLISSFNFHHYDNLVHIEDETAASVGKRDPRKRKNVAKENELVNLLFAAKSGELAVVRRLYLADVGMSDADYDGRTALAVAASEGHEGIVDFLLSVGVDVNPRDRWGGTPYGDALRHGHAAVVELLKAYGGTL* # ORIGINAL: g2524.t1 original gene structure, not modified by PASA NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS gene 11510 13628 . - . ID=g2524;Name=g2524.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS mRNA 11510 13628 . - . ID=g2524.t1;Parent=g2524;Name=g2524.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 12500 13628 . - . ID=g2524.t1.exon1;Parent=g2524.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 12500 13628 . - 0 ID=cds.g2524.t1;Parent=g2524.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 11510 12282 . - . ID=g2524.t1.exon2;Parent=g2524.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 11510 12282 . - 2 ID=cds.g2524.t1;Parent=g2524.t1 #PROT g2524.t1 g2524 MNSILVKQSAVGANDDQITGMPLALIKRIFKTPSNATVGSIADSAAESGASGGGSGGGGGGSGSYPRSASFDDIDTKLLTISRTGAAWVTSMRTSATGELTITGQTQARLRSPLIINAGGSKYVFGQDASITANQLSVDASTEIILSTGRLVFDANEIVGLPTPPSPFGQDDVVVDAINNILVTAGDSATVSSDQTIIRGLEYVQLEGFEVHVNADGQLTLSAKRIVLDAPDVVLPPHMQPSECVCGEWRAAPTDLVEGEHVTITATQSIVANAKQVAVSGQAVTISGREVYQQGEERITLAAKTVVLDAHSVNLPLYLVPQDCDTIIGQAVGVDALNGKDVTITASESVVAHADEQLALTSGNAVVIGGREIYQRESIIAHADKQLVLNSGEAVVIGGREIYQRGEERITLDANSIILDGVSVSLTARGEIRHSARAVVFDVGEVRAENIVGDRIAICGEKQGNVLSESLMVAGGTSAFSQSGRTATISGESLNVECGNTIVNGGSVSVFASESVQCVGETISVNAGKQLVLGATDSVAIEAEEEIHQSARVITMSADTLHMEAKYELTFSVPSFELKMTDGKAVPVFASRNDALVEIGQPTFYNEGAGGLRVGEVKSARLFFLADGSVQWA* # ORIGINAL: g2523.t1 original gene structure, not modified by PASA NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS gene 9778 11127 . - . ID=g2523;Name=g2523.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS mRNA 9778 11127 . - . ID=g2523.t1;Parent=g2523;Name=g2523.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 9778 11127 . - . ID=g2523.t1.exon1;Parent=g2523.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 9778 11127 . - 0 ID=cds.g2523.t1;Parent=g2523.t1 #PROT g2523.t1 g2523 MEITAKLTEKIQSVVTASTTGQKLKKDSIDKLIVDIVAQLKADGWKKVTKKATTAIVYDMFDGPFYGLKTDMVQPNSPPASPALTVEEVRVEVEKPVSEEQSRIVPENVQRPTVATAANERLYNRLIELMNLEQPEQRTPLWYEMRNNMITASDAAAAIGESAYDTALEFVLKKCNRGKVFTGSDATRWGQKYEPIANIVYKAEVKTNVFEFGLIPHKTLSYLGASPDGICDGELAGRMLEIKCPMMRKIKTEGNAIGDICPKHYWIQVQMQLEVCDLDACDFFQCKMYEYQSKAEFDADRLDGSDWKTANGSYKGVLVTRKLAGVDEPQFVHIYPSKLEMTKEEMEDFVRDNLSLEMEHLAAGEERTVVYWSVPVFHKLTIPRDTVWWNTVGLPKLEAAWNRVKACRNDDKLLSSVEAEVKMLQGAHAKKKPSMPVTAAFKRVTPRAT* # ORIGINAL: g2525.t1 original gene structure, not modified by PASA NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS gene 13927 14893 . + . ID=g2525;Name=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS mRNA 13927 14893 . + . ID=g2525.t1;Parent=g2525;Name=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 13927 14014 . + . ID=g2525.t1.exon1;Parent=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 13927 14014 . + 0 ID=cds.g2525.t1;Parent=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 14201 14734 . + . ID=g2525.t1.exon2;Parent=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 14201 14734 . + 2 ID=cds.g2525.t1;Parent=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 14865 14893 . + . ID=g2525.t1.exon3;Parent=g2525.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 14865 14893 . + 2 ID=cds.g2525.t1;Parent=g2525.t1 #PROT g2525.t1 g2525 MSTYQTGRMQNNNSAKEMILAFVQTVDYQEYGVSFNMPDASGICPLHLAVELAAQSNGDRVHVIEVLLKAKADPNVKNAYGETPFMVAVKTLTAMRMSFIESLCTIKKTVQKCEPYDQLLQLSFALNTFDSILHALTERPEFVPTITDQQHKTPLDICVEYGDFKMLKTVLEVMPSFDSAAVLEKASKYSKKYKVETSRMAAQLFDLGGHLTKATR* # ORIGINAL: g2522.t1 original gene structure, not modified by PASA NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS gene 50 1837 . + . ID=g2522;Name=g2522.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS mRNA 50 1837 . + . ID=g2522.t1;Parent=g2522;Name=g2522.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS exon 50 1837 . + . ID=g2522.t1.exon1;Parent=g2522.t1 NODE_947_length_15599_cov_39.8133_potentialcontaminant AUGUSTUS CDS 50 1837 . + 0 ID=cds.g2522.t1;Parent=g2522.t1 #PROT g2522.t1 g2522 MWTVVHGSGRSYLNKGKKRLTVDNLSCSLHKTVIFENVFFTADSGELVFIMGPSGCGKTTLLDTLCSRRQPGQQLGTVSMTNLDIGCEIPVCNSVYVQQDDVFFPNLTPFEHLMFNYLERGGGKNPTKTVNNCLELVNLADVAHQPIGGVLPGGIVVKGLSGGQRRRLSVAAALLVEPDIILLDEPTSGLDSHNAEVIISVCKNIAKTNCIVFCVIHQPSTAVYKSADRVILLGKDITGVGRVIENLRLTDLPEDHPMQNPTLALHNAIEFENQPIVKCMETPRISRALTRPTVKQEGPAEQTDWKKPELPRRRSSFYVRLRRPAAKMFQTCVRTLAQQTNTFMSTYLLFRRSLTVAIRSPVNFLARFGSMCVFGILLGTLFANADMKNKATMSSLIFPTLISLQCLPFGSIATFQDMRIYYVRERNNKLYRQIAFAAAMIALEILIACVCGVTMVSIIYAIAARSLPALAFIGIGTIFHVVSNLFILAVSVWTENATVGFSIAAAATSIMQLYAGFFIPIRSVPVWLRWLSRISFTRYAMDAFVTGCIGDGELAKALGLSGDLKEAIVCLCMFIVGFSVLCYYGLDRHRRGRAS* # PASA_UPDATE: g9130.t1, single gene model update, valid-1, status:[pasa:asmbl_8217,status:12], valid-1 NODE_565_length_21126_cov_39.9327 . gene 202 2046 . + . ID=g9130;Name=g9130.t1 NODE_565_length_21126_cov_39.9327 . mRNA 202 2046 . + . ID=g9130.t1;Parent=g9130;Name=g9130.t1 NODE_565_length_21126_cov_39.9327 . exon 202 716 . + . ID=g9130.t1.exon1;Parent=g9130.t1 NODE_565_length_21126_cov_39.9327 . CDS 202 716 . + 0 ID=cds.g9130.t1;Parent=g9130.t1;5_prime_partial=true NODE_565_length_21126_cov_39.9327 . exon 926 1103 . + . ID=g9130.t1.exon2;Parent=g9130.t1 NODE_565_length_21126_cov_39.9327 . CDS 926 1103 . + 1 ID=cds.g9130.t1;Parent=g9130.t1 NODE_565_length_21126_cov_39.9327 . exon 1416 2046 . + . ID=g9130.t1.exon3;Parent=g9130.t1 NODE_565_length_21126_cov_39.9327 . CDS 1416 1637 . + 0 ID=cds.g9130.t1;Parent=g9130.t1 NODE_565_length_21126_cov_39.9327 . three_prime_UTR 1638 2046 . + . ID=g9130.t1.utr3p1;Parent=g9130.t1 #PROT g9130.t1 g9130 DARVSGASASSSSGVNIGMIAGLVAAVGAGCAVAAAFILYRRRKNKKGFGKRKGFDDDDDLGMVPLKRRSRRSTRNDNNNATSFLNPMHRNHSHLDRVTTEGDRGYGGSRRFSDPDIPTITLSGDGGRYESVERNGGAPRKGSKFMPDEEGIYDRPKGDDEEPMYSSIRTVASPAASASEVIYDNNNARLAATRQSAMARPQRGGEIMYSTLNFHEQDMSGKPDHRESVYEVPKHGSKYSDQEDAEGVYSVPRSNTITTGVKYADVAFSTPAGPVSDYATPRPSAQGGSGDVGETNYSVIRQPR* # ORIGINAL: g9133.t1 original gene structure, not modified by PASA NODE_565_length_21126_cov_39.9327 AUGUSTUS gene 9714 14829 . + . ID=g9133;Name=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS mRNA 9714 14829 . + . ID=g9133.t1;Parent=g9133;Name=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 9714 9751 . + . ID=g9133.t1.exon1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 9714 9751 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 9992 10675 . + . ID=g9133.t1.exon2;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 9992 10675 . + 1 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 10873 10987 . + . ID=g9133.t1.exon3;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 10873 10987 . + 1 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 11186 11308 . + . ID=g9133.t1.exon4;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 11186 11308 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 11430 11637 . + . ID=g9133.t1.exon5;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 11430 11637 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 11837 12038 . + . ID=g9133.t1.exon6;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 11837 12038 . + 2 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 12335 12413 . + . ID=g9133.t1.exon7;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 12335 12413 . + 1 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 12628 12702 . + . ID=g9133.t1.exon8;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 12628 12702 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 13021 13062 . + . ID=g9133.t1.exon9;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 13021 13062 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 13240 13375 . + . ID=g9133.t1.exon10;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 13240 13375 . + 0 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 13628 13741 . + . ID=g9133.t1.exon11;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 13628 13741 . + 2 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 13923 14081 . + . ID=g9133.t1.exon12;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 13923 14081 . + 2 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 14372 14431 . + . ID=g9133.t1.exon13;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 14372 14431 . + 2 ID=cds.g9133.t1;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 14576 14829 . + . ID=g9133.t1.exon14;Parent=g9133.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 14576 14829 . + 2 ID=cds.g9133.t1;Parent=g9133.t1 #PROT g9133.t1 g9133 MDSNQQFVDEYGGSHAWQMSGGQPELAVLRGGIATTTANNNNNSNNNNTSNSSSNLGNSTAGNPYGAPVGGGLGSMVGMGHSVTGASAFYLDESSSAFGGGQMRMQHMQEPTFHQQQQQQQQQQQQQQQQQQQQHQHHHHLQQQQQPRHHHNQHTHGQQPQLAHTPLTRQASAPAVGSSPHPAVGHVAASASIHLGVGIGGTGSAQPGHVGHVGAGKDLLSRAVAIAREQSSVEPSALVDCEPALQVELVNQGMWEEFHVCTTEMILSRQGRCLFPALKIKIKNLAPHLRYAIIVDFVTVGRSKWRFDANRWVELKENDKAHCLIHHVSDLPAVQELPPPVYVHPDGINTGEHWMSKEVSFSKVKLTNKVNDVGHMMLNTFQKYIPRFHIVRVEPTPVRVNLALFACTQFVAVTAYQNDAIKKLKKNTNPFARPRWLRHDEAASIAPTTTLASFDVDFDPDDFGDDWDYNEEDMADMPMQASIGASPRGLKKRKSMTDIDDDQGGPSQVPMLLAGGSLNHSLNNIMPAGIIETPGIDLLQQQHVISEAQRQIYHHPNNVQRSPPTQQASANRLFYDPHEKYILVVDDDIVTRVLIESFLRTYGFNVTLCVDGKQAWDCLSGGQRFDIAIVDCRMPNMDGFDLLQHITAHPVHMTMPVVLMSAAGDYTTAEKSINMGSSDYLMKPVSRELLKRRIDNCFLQQLSAVKHAEMERYLNFKTYECSELQQQNDILALNIRERDERIYNLVDELEQLKNFVQTLKII* # ORIGINAL: g9134.t1 original gene structure, not modified by PASA NODE_565_length_21126_cov_39.9327 AUGUSTUS gene 16416 20693 . - . ID=g9134;Name=g9134.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS mRNA 16416 20693 . - . ID=g9134.t1;Parent=g9134;Name=g9134.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 16416 20693 . - . ID=g9134.t1.exon1;Parent=g9134.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 16416 20693 . - 0 ID=cds.g9134.t1;Parent=g9134.t1 #PROT g9134.t1 g9134 MSPVSGVAFDAAPIRSLHGLGSREAIIRVPDLVTDCCKSARRAAQLADDEEGWTAILDLFRASLARAYNAVSPALPSAVNIASSHSSGEDALKQFTQVASLILLVLPLSQPMRNAVRLDASSVLNPACAFLDECATVLGESSHSNALFDASVAFTAAGVLGDILALLCRPCAKFTSSLVDSNPKVGHAAAWLATGRSESGKDECGIPSHCYPFLALALSGHDTGVIVGDSDAYAECRDASARLVVKCADAICGGALSPESLCRTLRLLGSMVGICDAARKTVVSHERCITAVIAIVGDNSVSASVRAAGLEFLTFMCVGTNEYKERLITSPNFVAGVCSCLSRGMGADGIAVKMACGLLAAATIASPAIVEALCRSKEISQVITSLARVLADAVASPYGRGHMFSAAHVLSFISRVHRRLVMDALVEFDIPSTLCRMLDSERALIAAAEADVGVVDDWEVVFDETTTTREVALRLLCSLVRPEYDGVKELVSKKAFMEGILACLRYGSEDDRRWALLLCSRIVSHAPAARCIATMGILQAMIGILEAPVSRRTAEASALAMGLYAGGDIVGGISLGSHVPASTAAQPSSATRDIPTPIPGGNRYEEYVAYGVPSQFVSVGDVRLDIVVFTSGNVALARLPTVSVVLEALYECSKSEIMRPFMVEAGVGEKIAPYSVIEGTQYAGICMLIDAHLAVSEEMSPVRAAPVSGQGDPPPSGLASSPRNARKSQSSTKRSSKRFGTIIEHLCMCVREIMTGKRRDFVAYMRGFDTNAAGCLEALRAVTLNESCGEYLQPIVDLVVDCLKLRVPAFLALPGVAEQLSGLAWNIAFHKEWQKELTSAGETVVALKSFATESDNPRVKRNASGALWSLGVRLSKRGERSRHRLVASPGMAAGATSTTASGRPAGESPYTVRSHAPSSVAPPTPTAAVKEREAAGSAPADPPVRVRTFFGNARHTATETRREVTLPRQAQPVDDLAASSAPPPPPPPVLGDRTAPTSSGVRSPDAPPPPEVGAAAAAAATMRSVIVERTESKEPSDIRGSNSSSEVDLYTGNLFEGDSRSEISLGSVGAADDVPTTAAPAHVTTTVAGGHIMISYNWTHQSTALRIRDRLVADGLPVWIDVSDIQGSTLEAMASAVEDAAVILLLCSSQYQESIACRTEAEYTYTLRRPFIPVVVQRGLQMRTWLGAMVGSRLYHPLYEDLSDADFAVKMDGLIREIRLKLNSGAVSTVQLAPPIHSGGVVNQPSSGPTKQSLTASELSNDAVPADTDAGKHIHTLHPLDSDENVAAPHGESSLPSFHTRDKGQPIGNPTSMNMSVPVAEWTVDDVALWLRSVGMASYASDFKDSGMSGLSLQELYSLVRSGNDLEFGRILREDVGIKSAGVVLEFKGWLRTLFGSQTRQIGLGAVAGKKSTEAGGAISQCVCL* # PASA_UPDATE: g9132.t1, single gene model update, valid-1, status:[pasa:asmbl_8216,status:3], valid-1 NODE_565_length_21126_cov_39.9327 . gene 5078 7667 . - . ID=g9132;Name=g9132.t1 NODE_565_length_21126_cov_39.9327 . mRNA 5078 7667 . - . ID=g9132.t1;Parent=g9132;Name=g9132.t1 NODE_565_length_21126_cov_39.9327 . five_prime_UTR 7588 7667 . - . ID=g9132.t1.utr5p1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 7379 7667 . - . ID=g9132.t1.exon1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 7379 7587 . - 0 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 6940 7126 . - . ID=g9132.t1.exon2;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 6940 7126 . - 1 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 6600 6729 . - . ID=g9132.t1.exon3;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 6600 6729 . - 0 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 6051 6374 . - . ID=g9132.t1.exon4;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 6051 6374 . - 2 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 5700 5758 . - . ID=g9132.t1.exon5;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 5700 5758 . - 2 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . exon 5078 5385 . - . ID=g9132.t1.exon6;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . CDS 5140 5385 . - 0 ID=cds.g9132.t1;Parent=g9132.t1 NODE_565_length_21126_cov_39.9327 . three_prime_UTR 5078 5139 . - . ID=g9132.t1.utr3p1;Parent=g9132.t1 #PROT g9132.t1 g9132 MTNRLVVAVAVLVAMVVVADALVINEAEFTSAFAAFKAKYGKKYANAAYEGARYLLFRQKYLNFKNKNATISYNKYSDVGYGEFQKTNMGYQKNVGSLPSGGSVIEWFPPNTAPPSSVDWVTLGRVTNVKDQGQCGSCWTFAASAALEGQVLKYNPSVTYSLSPQNLLDCTSPSYSCNGGNTEVALSYVLSNGGIDTLNSYNYVGYQLTCQYLAACSGAQMSQEPSVVVARTSTPAGLESALTSAIAEIGPIAVTIYASEALQDYSEGVFVDTTCAGQEPNHAVTVVGYGTYKGQDYYLVKNSWGTDWGMGGYVYWARDGTNMCQIASNPVFPQVKNFTVNQAACTNAGGDNRKLNGKAGMTSPVAALVAVLAVAAGAFVAAFN* # ORIGINAL: g9131.t1 original gene structure, not modified by PASA NODE_565_length_21126_cov_39.9327 AUGUSTUS gene 2471 4559 . - . ID=g9131;Name=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS mRNA 2471 4559 . - . ID=g9131.t1;Parent=g9131;Name=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 4449 4559 . - . ID=g9131.t1.exon1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 4449 4559 . - 0 ID=cds.g9131.t1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 4147 4315 . - . ID=g9131.t1.exon2;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 4147 4315 . - 0 ID=cds.g9131.t1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 3746 3966 . - . ID=g9131.t1.exon3;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 3746 3966 . - 2 ID=cds.g9131.t1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 3144 3559 . - . ID=g9131.t1.exon4;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 3144 3559 . - 0 ID=cds.g9131.t1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 2818 2961 . - . ID=g9131.t1.exon5;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 2818 2961 . - 1 ID=cds.g9131.t1;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS exon 2471 2669 . - . ID=g9131.t1.exon6;Parent=g9131.t1 NODE_565_length_21126_cov_39.9327 AUGUSTUS CDS 2471 2669 . - 1 ID=cds.g9131.t1;Parent=g9131.t1 #PROT g9131.t1 g9131 MAGDSSNTLVLAYSGGLDTSCILVWLIEQGYEVICFLADVGQEEDFEAARAKALKLGAKKVYIEDLREQFVTEFIYPAVQANAIYEDRYLLGTSLARPCIARRQIEIAQAEKAAYVSHGATGKGNDQIRFELTYYSLCPEIKVIAPWRIPKFLQQFKGRLDLFQYAQSHGIPLPVTPKSPWSMDANLMHISFESGVLEDPAARAPDSLYKMTVDPAKAPDAPDEVSIEFKDGVPVKVTSPTSNETHTNALAIYLFLNKVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTVLRAAHLDIEAIAMDKEVRKVRDIISPKFSEHVYNGYWFSPEGKYVRSCIGMSQSGVSGTVHLSLYKGGVYTLARESPVSLYNKELVSMDVEGNYDPTDANGFIRVNALRLRENARLQQKIASAGNNSA* # PASA_UPDATE: g5745.t1, single gene model update, valid-1, status:[pasa:asmbl_6936,status:12], valid-1 NODE_4086_length_2206_cov_28.6405 . gene 371 2099 . - . ID=g5745;Name=g5745.t1 NODE_4086_length_2206_cov_28.6405 . mRNA 371 2099 . - . ID=g5745.t1;Parent=g5745;Name=g5745.t1 NODE_4086_length_2206_cov_28.6405 . five_prime_UTR 2038 2099 . - . ID=g5745.t1.utr5p1;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . five_prime_UTR 1876 1893 . - . ID=g5745.t1.utr5p2;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . exon 2038 2099 . - . ID=g5745.t1.exon1;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . exon 1699 1893 . - . ID=g5745.t1.exon2;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . CDS 1699 1875 . - 0 ID=cds.g5745.t1;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . exon 1010 1383 . - . ID=g5745.t1.exon3;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . CDS 1010 1383 . - 0 ID=cds.g5745.t1;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . exon 371 433 . - . ID=g5745.t1.exon4;Parent=g5745.t1 NODE_4086_length_2206_cov_28.6405 . CDS 371 433 . - 1 ID=cds.g5745.t1;Parent=g5745.t1;3_prime_partial=true #PROT g5745.t1 g5745 MIANPDLLRETQTSSTFSVRLFFLWLVRALYQSLVTLFFFVAFYDPRGMARKDGTTFDQECVSVGAFAAAVCVQTLNLALETNSFTWINHLLIWIQAPLFFLVFLAASVFPRLQMYGVMQQLLGDASFWLLLLLTVTACMFPFYASKFIRMSYFPSPHDAVRLNKLRQKDDESNGGLMEPLLNSCNCFGKSAGGLSPAELEESP # ORIGINAL: g6233.t1 original gene structure, not modified by PASA NODE_3300_length_3790_cov_38.0345 AUGUSTUS gene 529 3246 . - . ID=g6233;Name=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS mRNA 529 3246 . - . ID=g6233.t1;Parent=g6233;Name=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 2689 3246 . - . ID=g6233.t1.exon1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 2689 3246 . - 0 ID=cds.g6233.t1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 2314 2424 . - . ID=g6233.t1.exon2;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 2314 2424 . - 0 ID=cds.g6233.t1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 1890 1965 . - . ID=g6233.t1.exon3;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 1890 1965 . - 0 ID=cds.g6233.t1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 1405 1562 . - . ID=g6233.t1.exon4;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 1405 1562 . - 2 ID=cds.g6233.t1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 1002 1146 . - . ID=g6233.t1.exon5;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 1002 1146 . - 0 ID=cds.g6233.t1;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS exon 529 779 . - . ID=g6233.t1.exon6;Parent=g6233.t1 NODE_3300_length_3790_cov_38.0345 AUGUSTUS CDS 529 779 . - 2 ID=cds.g6233.t1;Parent=g6233.t1 #PROT g6233.t1 g6233 MGDRAGGPPRVIRLSVSQPRPVDSGGDAAGARAKDAAKEKDAPLLLVVKPPGASAGKQGAGDATANQASKPAPKALRLSISHSSLAGQLPSPLLAQPQQRPQAKSVQVIQARRDEEHRPQFDKVHEEMLARQDAADAGKEDLASVYVGANADELMRAYSRRMFVHVGAQVLAHSGYNAAEADTLELMSEVMQVFMGELGRRSRGYAELGGRTISTAYDTRRVLADLGFDARLLLKYLNALRQRPAVEFVVPVFPALPRHIKIDAGTANPSALLNLEKAVRPPIVPSHLPPFPEKHTFVDTPVYTAIDIDRAQVLGLACKQRRQMEDGMWQFAARTAECRVITVDDISYRVLTDPTLMPSYCASLKSVGEMPPPLRAGGASGATTSGGAPHPHPHKRHEEKAVEEKRQLRAAELARNNPYMQPPKNVKTYVAV* # ORIGINAL: g362.t1 original gene structure, not modified by PASA NODE_1466_length_11120_cov_39.5785 AUGUSTUS gene 6248 11087 . - . ID=g362;Name=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS mRNA 6248 11087 . - . ID=g362.t1;Parent=g362;Name=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS exon 9206 11087 . - . ID=g362.t1.exon1;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS CDS 9206 11087 . - 0 ID=cds.g362.t1;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS exon 8390 8759 . - . ID=g362.t1.exon2;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS CDS 8390 8759 . - 2 ID=cds.g362.t1;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS exon 7883 8069 . - . ID=g362.t1.exon3;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS CDS 7883 8069 . - 1 ID=cds.g362.t1;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS exon 6248 7570 . - . ID=g362.t1.exon4;Parent=g362.t1 NODE_1466_length_11120_cov_39.5785 AUGUSTUS CDS 6248 7570 . - 0 ID=cds.g362.t1;Parent=g362.t1 #PROT g362.t1 g362 MSSSSWPGEYLSLSGMSATRDGGFVYAQDDSTLRMANCRLSNCTARNGAVISLSGRAYAVISDSSIDNVAAHQNGGVALIRDDSLFDMYSTNTTNVSAVNGAFLSMNGGSQVLIQQSYVSGITVRQKGAFARLQDAATLTVDDVRVSNASANAGSVLFVTDDASVVVSRSTFASLKATDAGGFAYADGGSHIQLSRVNITNTTARNGGAIGVFSTARLNVSATEVTDSQATDEGGVLYVQDKGTVVASDLRVVRVSAFSGGVVYASDTSTVRLSSAIVRGSNAASSGGCVYAGGSAVVRLSGGSFVQCHAGTTESTGGTGGVASVETGARVMVSGPMLTVALASAVIGPGFYSEERFDDASLSSVALEGPLVDPASKVIVVDAGGLFSGPPARIAAIGASGAPLPVGAGVAMNTASGAIVPAFTLQLRDIYGNVTSLSGRELTVRLSLRPSDGSALLTGDVEKGFGSSSNITFASLRLYGVPGTQYSLVVEASNKFYYGEWDTNVQRQNLLNNASIGIGIRDCGADEISVTGPLGYPECDAVGASAVGSSSSSNVLQIALSSSLVAGAVAIAAVYAVFRWSRHSAMLRQKESRATHEEFIEKHLSKQPELFSFETPRDAVELLDKLGEGEFGVVLRARVVREDGRPCLCAAKMLKTGCTLRERVAFVQEATVMQGIGQHPHVVSLCGIVSRDEPMLILTEYVPHGSLDAFVKSIPVAHRSAGSVSVNMFETFSSHIARGMAHLAQMRIVHRDLACRNCLVGQDLFGGFVCKVTDFGMSEETTGGKEYFRQKEKEKLPVRWMAPESILEKKYHQASDVWAFGVTLFEMFSFGQLPYAGMTNVAVMAHVKAGGRLSRPDACDTHFFDKMMRPCWATDPEERPTFEMFEGLLGDVFDARQAGAVEAVTVKMDTNDGCDPHALKTSSTSSAAGVGRGAFRPPALMPSPSAGLTIPARGVAQARRDVVASPQQQRGMSTRTPIATPALERLRRAGNSLRKSLTGGYLMMRGRSSLQMESTYDNMLLKASEQPVTDTSTQKNLYSTENDGESVPDGAPLEHASVVRSSASVDDVRISLGSSASASRSGRAVGLSKSKSVGSSRTSARMQIVMDEARPIAGWASPSSVRRALSQPPIPRDDSNLEETISSSDEDNAEEYTLPLDVACEFESAPPIVGKRVDRVEGESNSGGKSSLSQSHTDRTAVEETASPAQSLSGSDAFVMAADRFAAHRQTMRKPTLSFALRDDDGGVYEQPSETCV* # PASA_UPDATE: g361.t1, single gene model update, valid-1, status:[pasa:asmbl_1679,status:12], valid-1 NODE_1466_length_11120_cov_39.5785 . gene 1 4935 . + . ID=g361;Name=g361.t1 NODE_1466_length_11120_cov_39.5785 . mRNA 1 4935 . + . ID=g361.t1;Parent=g361;Name=g361.t1 NODE_1466_length_11120_cov_39.5785 . five_prime_UTR 1 33 . + . ID=g361.t1.utr5p1;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . exon 1 1915 . + . ID=g361.t1.exon1;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . CDS 34 1915 . + 0 ID=cds.g361.t1;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . exon 2362 2731 . + . ID=g361.t1.exon2;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . CDS 2362 2731 . + 2 ID=cds.g361.t1;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . exon 3052 3238 . + . ID=g361.t1.exon3;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . CDS 3052 3238 . + 1 ID=cds.g361.t1;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . exon 3529 4935 . + . ID=g361.t1.exon4;Parent=g361.t1 NODE_1466_length_11120_cov_39.5785 . CDS 3529 4935 . + 0 ID=cds.g361.t1;Parent=g361.t1 #PROT g361.t1 g361 MSSSSWPGEYLSLSGMSATRDGGFVYAQDDSTLRMANCRLSNCTARNGAVISLSGRAYAVISDSSIDNVAAHQNGGVALIRDDSLFDMYSTNTTNVSAVNGAFLSMNGGSQVLIQQSYVSGITVRQKGAFARLQDAATLTVDDVRVSNASANAGSVLFVTDDASVVVSRSTFASLKATDAGGFAYADGGSHIQLSRVNITNTTARNGGAIGVFSTARLNVSATEVTDSQATDEGGVLYVQDKGTVVASDLRVVRVSAFSGGVVYASDTSTVRLSSAIVRGSNAASSGGCVYAGGSAVVRLSGGSFVQCHAGTTESTGGTGGVASVETGARVMVSGPMLTVALASAVIGPGFYSEERFDDASLSSVALEGPLVDPASKVIVVDAGGLFSGPPARIAAIGASGAPLPVGAGVAMNTASGAIVPAFTLQLRDIYGNVTSLSGRELTVRLSLRPSDGSALLTGDVEKGFGSSSNITFASLRLYGVPGTQYSLVVEASNKFYYGEWDTNVQRQNLLNNASIGIGIRDCGADEISVTGPLGYPECDAVGASAVGSSSSSNVLQIALSSSLVAGAVAIAAVYAVFRWSRHSAMLRQKESRATHEEFIEKHLSKQPELFSFETPRDAVELLDKLGEGEFGVVLRARVVREDGRPCLCAAKMLKTGCTLRERVAFVQEATVMQGIGQHPHVVSLCGIVSRDEPMLILTEYVPHGSLDAFVKSIPVAHRSAGSVSVNMFETFSSHIARGMAHLAQMRIVHRDLACRNCLVGQDLFGGYVCKVTDFGMSEETTGGKEYFRKKVKEKLPVRWMAPESILEKKYHQASDVWAFGVTLFEMFSFGQLPYVGMTNVAVMAHVKAGGRLSRPDACDTHFFNKMMRPCWATDPEERPTFEMFEGLLGDVFDARQAGAVEAVTVTVDTNDGRDPHALNTSSVSTATAAAGVGRGASRTSALTPSHSAGLTFPARGAAQVVASPQIHSATATPALDMLRRAGSSLKRSLTGGNFLARRRSSVQVESAYDNMLLKADEQPVTDTSTQKNLYSTENDGESVPDGAPLEHASVVRSSTSVDDVKISLGSSASASRSARSVGFATTESPMPRNIRTSARMQIVMDEARPIAGWASSSSVRRALSQPPIPRDDSNLEETVSNSDEDIAEEYKLPRDVACEFESAPPIVGKRVDRVECDANTSQFAVSAHSASSTSNAFDSGGSSPMSATSSLTRQQLSHSSSAAAEQSVTASPAQSMSASDASTHGEQAAGRFAARRLTIRKPTLSLDLRDDDGAMYTHPSETSL* # ORIGINAL: g10248.t1 original gene structure, not modified by PASA NODE_859_length_16639_cov_41.3678 AUGUSTUS gene 7692 8198 . + . ID=g10248;Name=g10248.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS mRNA 7692 8198 . + . ID=g10248.t1;Parent=g10248;Name=g10248.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS exon 7692 8198 . + . ID=g10248.t1.exon1;Parent=g10248.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS CDS 7692 8198 . + 0 ID=cds.g10248.t1;Parent=g10248.t1 #PROT g10248.t1 g10248 MQFESILQRSLRRIDVNNFLSADEISVVAHLAHDNFVADTIIATRSVGSAGAGLWNAIQSANFSNEIRHSSQLSFSATIPVNRPSLVASVERVIQSGWVCPAELVGRDTLYATLRRIHLQLVWDLYNANEDAQSTWKTIVDKYVRPNILAFVPFLSPTAKSLMAERRV* # ORIGINAL: g10247.t1 original gene structure, not modified by PASA NODE_859_length_16639_cov_41.3678 AUGUSTUS gene 3138 7605 . + . ID=g10247;Name=g10247.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS mRNA 3138 7605 . + . ID=g10247.t1;Parent=g10247;Name=g10247.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS exon 3138 3144 . + . ID=g10247.t1.exon1;Parent=g10247.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS CDS 3138 3144 . + 0 ID=cds.g10247.t1;Parent=g10247.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS exon 3425 7605 . + . ID=g10247.t1.exon2;Parent=g10247.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS CDS 3425 7605 . + 2 ID=cds.g10247.t1;Parent=g10247.t1 #PROT g10247.t1 g10247 MEACPGAVAETESHSLVPNIAGASAESAVCYGEEVADSFRSSVAAEKSPTFCADSGTELSAGNSATIVNAGTASTPHSSGLYPVLPASADVPLTVPVPTESAAPVIATRNTEKKHVKRVTNSVVAGKRRPLLKIVHNHVTQHVYVGSAGKGNWTGHFGGMPTKGSGAEVGGRSSVNGSESTKAQPSARGETANGPMNEKVDVADWRTGSPADQDGERIQSPVNATAMDGARKMTVVVRYTKEIVARVSLNRHLTYSTQYQLGLQVLLPVVTAMLTMIESHVLEQSIAVAILGALVIYANCLIGDDLNIDDYAKRLHARKSCVHAIGRYPFPFKQIVQIVVGSYSCALIVYTAYCVNSVQSINLTTLNATEMDSDTLSAFRVNLVILVAMGILHFLCSLFHWAATMGSFVACSPTWAVAVKPQTNSMDGDVAFFHRRLLRSMTNVWKLVWSFVLIVPMSGLLRRWIADVNNARDELEAVLHRAIAAPINIRKFDDAMTACISLDLLIPSSSSSTFWTSIRSFMHGELLCALSDGSLEISGRAKLELRELQCVRSMYALLAHTFLVCMQKTSINLRAFLASGCEGVNLREVMRIGVDLRPFEAIELSSDMPVDLHPEEWQRQITTLHRSLFDEIQLAGRAEDECVALSPDGRSMATGSGGRLRLCNMALFESTVFHASDVRVKPRKTTSSPDTRCGRERHVDVENSTDWSTAFEPASQIVPDIRTVAFSSDSRTVASGFHDGTVWLLDIASGKEIQRLEGHSDSITRIVFSPDGRTVASGSFDRTVRLWDVARGRATHTFEGHSRRVMNVVFSPDGQIVASECDRTVRLWDAISGRATGILEGHSDVVTSVVFSPDGRIVASGSQDTTVRLWDVITGKATHILNGHTESVTSVEFSPDGRTVASTSDGTVRLWDARRGRTTHTLHGHPASETKIAFSPDGRMVAMGSSFYLPIPEVRLWDVRSGKSLRTLKGQGLLNIAFAVDGRLVTFGKSDKTVRLWDVNSGEFRIFPYTLLDCGDCFEEELWAAYNGIRAFSRSMSRNSITAVICHETDGRIVVAGFKDGTVGLLNVASGAWTHSVDGDNRPVRTVAFSPDGHRVASGSLDSRTVRLWDVSNGVAIRTFALEGHTRHITAVTFSPDGRTLASGCMGGTVWLWDVTSGEAIHTVEGHCRRISTIAFSPNGRTVASGCMGGTVRVWDTKHHAWTQILDGHTDRVTNVAFSPDGRMVASGSGDTTVRLWDIQTGKEIQTFSMYAVVTSVAFSPDGHTVAGVCTDGVVRLWDTTCCALIRVLEGHTSDVISIAFSPDGRQLVAFHAHYSGDVYCRLWDSTGNVASSVLTRSWDVNPAWEISEEEVMTSENCRSVLLSAADAFKSTLNCTRPCTKPWSILNEFSTFAIG* # PASA_UPDATE: g10252.t1, single gene model update, valid-1, status:[pasa:asmbl_9705,status:12], valid-1 NODE_859_length_16639_cov_41.3678 . gene 15620 16419 . - . ID=g10252;Name=g10252.t1 NODE_859_length_16639_cov_41.3678 . mRNA 15620 16419 . - . ID=g10252.t1;Parent=g10252;Name=g10252.t1 NODE_859_length_16639_cov_41.3678 . five_prime_UTR 16418 16419 . - . ID=g10252.t1.utr5p1;Parent=g10252.t1 NODE_859_length_16639_cov_41.3678 . exon 15620 16419 . - . ID=g10252.t1.exon1;Parent=g10252.t1 NODE_859_length_16639_cov_41.3678 . CDS 15725 16417 . - 0 ID=cds.g10252.t1;Parent=g10252.t1;5_prime_partial=true NODE_859_length_16639_cov_41.3678 . three_prime_UTR 15620 15724 . - . ID=g10252.t1.utr3p1;Parent=g10252.t1 #PROT g10252.t1 g10252 TITTIVSDVQSDPSDAYWNDNAQLYQTVAVLKSNLNIAVLNFKASLIRRFSACAKDPLQLRMLGWTLPQYDYIAPTQSQIDSFLANQAAPIIIQRMVRLLFASKWQVCQISAVYDSGNKKTYLNCQNEWENTYNLPYDRWYPVQGSKDAIKVSTYAGWICPGGRYDSGILVDLGVYTDAGETGREESLVQSTLEANIYRQYSGVNQYEADGWSSLTVSKCPSDCGKRTGC* # PASA_UPDATE: g10246.t1, single gene model update, valid-1, status:[pasa:asmbl_9701,status:12], valid-1 NODE_859_length_16639_cov_41.3678 . gene 102 1744 . - . ID=g10246;Name=g10246.t1 NODE_859_length_16639_cov_41.3678 . mRNA 102 1744 . - . ID=g10246.t1;Parent=g10246;Name=g10246.t1 NODE_859_length_16639_cov_41.3678 . five_prime_UTR 1501 1744 . - . ID=g10246.t1.utr5p1;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . exon 1468 1744 . - . ID=g10246.t1.exon1;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . CDS 1468 1500 . - 0 ID=cds.g10246.t1;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . exon 1001 1123 . - . ID=g10246.t1.exon2;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . CDS 1001 1123 . - 0 ID=cds.g10246.t1;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . exon 539 701 . - . ID=g10246.t1.exon3;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . CDS 539 701 . - 0 ID=cds.g10246.t1;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . exon 102 262 . - . ID=g10246.t1.exon4;Parent=g10246.t1 NODE_859_length_16639_cov_41.3678 . CDS 102 262 . - 2 ID=cds.g10246.t1;Parent=g10246.t1;3_prime_partial=true #PROT g10246.t1 g10246 MDSASYIKIQKVERVIMDPHVKHGADYGVVGTLFFTAHHLIFSAQSGNQEVFVLYMLIDSVEKKAGTGKGTPLVIRCKNFRVLHFVIPKAAECQSVYDSLQYLAFPARLEHLYVFTKINRIVSDGKMQPGWDTYNAVNEFRRIGLPSDKWVLTDLNSDYK # ORIGINAL: g10249.t1 original gene structure, not modified by PASA NODE_859_length_16639_cov_41.3678 AUGUSTUS gene 8425 9426 . - . ID=g10249;Name=g10249.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS mRNA 8425 9426 . - . ID=g10249.t1;Parent=g10249;Name=g10249.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS exon 8425 9426 . - . ID=g10249.t1.exon1;Parent=g10249.t1 NODE_859_length_16639_cov_41.3678 AUGUSTUS CDS 8425 9426 . - 0 ID=cds.g10249.t1;Parent=g10249.t1 #PROT g10249.t1 g10249 MAMRDEVGHLLRLHNERLCGVEPNEPTPVITTQGCLLLLAKQVLGEGGKFGVTMSVQLLSSPRALVIHDGRLSAKNTLYERKLTQGNAGHRIAALARLKLRGEGHPQLFNSTETMRLLSLTVNRRALLYWAEIDGVDGNGQVIGLTTFLERRRVVRNAAHLTLKSMLAGVEQMWILSRSRDEFRNIDTIKVPLPSRIAPDFRPEVSGCTLDHETLCTLPRRMPNALNKIEHFFREMEDTLRARPSDSPVSPDAIYHVTVRAGDTASPEGGVVALTFDPKEMEDESPCVDVEDKSPCVDVEDTSGDVEDRTGDVDDRTGDVKHANVHMEYYVNP* # PASA_UPDATE: g10250.t1, single gene model update, valid-1, status:[pasa:asmbl_9702,status:12], valid-1 NODE_859_length_16639_cov_41.3678 . gene 10498 14352 . - . ID=g10250;Name=g10250.t1 NODE_859_length_16639_cov_41.3678 . mRNA 10498 14352 . - . ID=g10250.t1;Parent=g10250;Name=g10250.t1 NODE_859_length_16639_cov_41.3678 . five_prime_UTR 13906 14352 . - . ID=g10250.t1.utr5p1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 12795 14352 . - . ID=g10250.t1.exon1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 12795 13905 . - 0 ID=cds.g10250.t1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 12314 12405 . - . ID=g10250.t1.exon2;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 12314 12405 . - 2 ID=cds.g10250.t1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 11891 12061 . - . ID=g10250.t1.exon3;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 11891 12061 . - 0 ID=cds.g10250.t1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 11530 11641 . - . ID=g10250.t1.exon4;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 11530 11641 . - 0 ID=cds.g10250.t1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 11026 11276 . - . ID=g10250.t1.exon5;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 11026 11276 . - 2 ID=cds.g10250.t1;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . exon 10498 10773 . - . ID=g10250.t1.exon6;Parent=g10250.t1 NODE_859_length_16639_cov_41.3678 . CDS 10498 10773 . - 0 ID=cds.g10250.t1;Parent=g10250.t1 #PROT g10250.t1 g10250 MATSRAKVAEAIYGVLDRLARQDGTDPDALVAINSMDDHELYGPGILLDAIVKCDNHSQTDFREPEGTQHRLKHVGDAVLHKWEDMRRDGIAAFSAIHGWTQTTLHLLKAALASATVDDADSPLSLKNFMGVIADTLSAASSNCTNAFDNLGMIREIMNAFKDFRVAPPRTLIVDLMSALADARFSQGDDYKEEQRKALHDVKAAFGLYADVDARADAANCPHTGEGYAPLHYAARIREDAGGKDLTELLLAYKADPLKRTVNACPDSAAQSLCWSPKVFQADNESPGVDKFVTSIGAPCNCKKIVKCRSETPMHFATSAENLIAFELLLKAAVKAKRARSGRLTVCDILNGSGDLPSSVAPPGTKISIQDKEHAATGGRLCQKCSESAAPTTHDGVVPDETDARTTLTQTLKLAKEKGILTARNRGHVNPIQDHIQMKVKNARLHEVLMPRPVKCILLGSHGKDTATGASDVDFGVAYATDSAVLVRHRHRVLHDLAVLLVSKELICTRSTGWLLQLWSNDLCGVVEVVILPEHVFKSPLKEYAVWHKHVQQAALQRLEFERIARLSRGKPLIRAIKKALALKNIKIRGVQVEHLVADLEKILELQLHGLVCALDAADKRFEFPQDKATRTPSTMAAPLTIREQDTAVTTALPRPFEAMVADAIYDVDL* # PASA_UPDATE: g10251.t1, single gene model update, valid-1, status:[pasa:asmbl_9704,status:12], valid-1 NODE_859_length_16639_cov_41.3678 . gene 14674 15286 . + . ID=g10251;Name=g10251.t1 NODE_859_length_16639_cov_41.3678 . mRNA 14674 15286 . + . ID=g10251.t1;Parent=g10251;Name=g10251.t1 NODE_859_length_16639_cov_41.3678 . five_prime_UTR 14674 14710 . + . ID=g10251.t1.utr5p1;Parent=g10251.t1 NODE_859_length_16639_cov_41.3678 . exon 14674 15286 . + . ID=g10251.t1.exon1;Parent=g10251.t1 NODE_859_length_16639_cov_41.3678 . CDS 14711 15283 . + 0 ID=cds.g10251.t1;Parent=g10251.t1 NODE_859_length_16639_cov_41.3678 . three_prime_UTR 15284 15286 . + . ID=g10251.t1.utr3p1;Parent=g10251.t1 #PROT g10251.t1 g10251 MAESAEPHSLRWEVKEKNGDITEGSVTYSLTNPTVRKTGGTNTHHSTVSVRWIYGSDCEDTWESVQVYLDLASHDLLLPANVLLFKNGKKTRNAWFGASWDNGRDSCSKGYGVSVDSLRGEDMHRGYRTGSGAGGEPAVTAELARLFRETVTIAGFDTLASFIAFITAGAPARRCSGCNVQAYLTEIWKK* # ORIGINAL: g9154.t1 original gene structure, not modified by PASA NODE_2427_length_6327_cov_43.6203 AUGUSTUS gene 1462 3425 . + . ID=g9154;Name=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS mRNA 1462 3425 . + . ID=g9154.t1;Parent=g9154;Name=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS exon 1462 1500 . + . ID=g9154.t1.exon1;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS CDS 1462 1500 . + 0 ID=cds.g9154.t1;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS exon 1790 1853 . + . ID=g9154.t1.exon2;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS CDS 1790 1853 . + 0 ID=cds.g9154.t1;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS exon 2224 2292 . + . ID=g9154.t1.exon3;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS CDS 2224 2292 . + 2 ID=cds.g9154.t1;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS exon 2531 2580 . + . ID=g9154.t1.exon4;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS CDS 2531 2580 . + 2 ID=cds.g9154.t1;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS exon 2724 3425 . + . ID=g9154.t1.exon5;Parent=g9154.t1 NODE_2427_length_6327_cov_43.6203 AUGUSTUS CDS 2724 3425 . + 0 ID=cds.g9154.t1;Parent=g9154.t1 #PROT g9154.t1 g9154 MVGQDVFGEYVLKVADFGLSKKREIGKEYYRRSKAAAVPIKWSAPESMKKGISSERSDCWSYGVVLWELWSFGSDPYVGITNLEVIDYVAAGGRLPLPEGCPPSLYAVMNSCWHLDPDERPDFAMLISTLTVIGTEMGDMVALGKNKDVAPAPLQSAGSYANLAVENNQVDQPSSAGDHDRRAPQWHSSHFRTPQTIVRAASYANIHLQGLLSPGKAARARAIGPSLLGLARASTTENPYTEADGTELHAVAADDGVIPPRKLVAAGTSGGDDSMASVSHISVVVPEDEILAVACADACGYVNSTDI* # PASA_UPDATE: g9155.t1, single gene model update, valid-1, status:[pasa:asmbl_4284,status:8],[pasa:asmbl_4286,status:3], valid-1 NODE_2427_length_6327_cov_43.6203 . gene 4615 6219 . + . ID=g9155;Name=g9155.t1 NODE_2427_length_6327_cov_43.6203 . mRNA 4615 6219 . + . ID=g9155.t1;Parent=g9155;Name=g9155.t1 NODE_2427_length_6327_cov_43.6203 . five_prime_UTR 4615 4706 . + . ID=g9155.t1.utr5p1;Parent=g9155.t1 NODE_2427_length_6327_cov_43.6203 . exon 4615 6219 . + . ID=g9155.t1.exon1;Parent=g9155.t1 NODE_2427_length_6327_cov_43.6203 . CDS 4707 5858 . + 0 ID=cds.g9155.t1;Parent=g9155.t1 NODE_2427_length_6327_cov_43.6203 . three_prime_UTR 5859 6219 . + . ID=g9155.t1.utr3p1;Parent=g9155.t1 #PROT g9155.t1 g9155 MAGNKPKTDPISSLMNSNNCETLSTNQLGALADRNKCDAAALERQLQSVKLSRRTVNAHWRKEEAKLIEFQRSLDDCNRSLRRGTSTTTTYADEKLLRAKLAQMQKQVQEQEAALAATADSPDTDIIPVVPQAPSPKQRRRISVFRKIKDVLRGEKSSPPEEKEKAAEPQKEKAKAAKVALTRTRSESLKTLNPYSSLDSGLGSASELSAKPPPLLEGLSRMENGWGSAGVKSACDLSSALAEPDTAGRYNRKRLSAPSLSSSRSYLSPMDAVLQRGSRLSLRSIDSTSSGSSHASSMGSRESSFASIAERKLSVSSLVERKASFASDPSLSMQSLASSVPHDSRSNLSTLGLPQKGPRQRRVSELGISEDEGERGPSRLGMK* # PASA_UPDATE: g955.t1, single gene model update, valid-1, status:[pasa:asmbl_6523,status:12], valid-1 NODE_3773_length_2782_cov_77.7425 . gene 7 2782 . - . ID=g955;Name=g955.t1 NODE_3773_length_2782_cov_77.7425 . mRNA 7 2782 . - . ID=g955.t1;Parent=g955;Name=g955.t1 NODE_3773_length_2782_cov_77.7425 . exon 2698 2782 . - . ID=g955.t1.exon1;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . CDS 2698 2782 . - 0 ID=cds.g955.t1;Parent=g955.t1;5_prime_partial=true NODE_3773_length_2782_cov_77.7425 . exon 1697 2038 . - . ID=g955.t1.exon2;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . CDS 1697 2038 . - 2 ID=cds.g955.t1;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . exon 863 1204 . - . ID=g955.t1.exon3;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . CDS 863 1204 . - 2 ID=cds.g955.t1;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . exon 7 603 . - . ID=g955.t1.exon4;Parent=g955.t1 NODE_3773_length_2782_cov_77.7425 . CDS 7 603 . - 2 ID=cds.g955.t1;Parent=g955.t1;3_prime_partial=true #PROT g955.t1 g955 LEITAIGSSDLSPTSIYSSSFHTDLTFEAPVYESDTITGQGITLRTDLTAAGTIVLSKVPLPKTTIFNVTDYIVKVYPNAKCSADSTNFAQFRSIPAASAGLPVRFNGLLPFTQYCVTIDARYNADVFTVYYGAPSGTTRNEAPIFATAFNDTVLIPTSTDKRALYLPFVPAVQTKNGVVNSYRVILVNTALSTVVSTVDVVATELNRRVKFTGLLPYTRYHVYVEATSTYDDAGTSNKVVGRSVDFGAGYSPADDVAPIISTSPGVVDITWAPNAFDDIGDKKAFSITYKLEQLSGSNWIPFRQGGPGAIGGKFSFTGLPTGNFRVRIDTVGGGVFVQPTPPDAVKNDVVKLSFANGTAADFRQKENDFKVAIAKALSSSRKRAAAVTASDVTIVSALQNGPNVDVSFYVKTTVVIPSATILSAVAANKQDISLSTGLPVSSAQSTPVAGTQVQ # ORIGINAL: g4806.t1 original gene structure, not modified by PASA NODE_18261_length_189_cov_110.325 AUGUSTUS gene 2 189 . + . ID=g4806;Name=g4806.t1 NODE_18261_length_189_cov_110.325 AUGUSTUS mRNA 2 189 . + . ID=g4806.t1;Parent=g4806;Name=g4806.t1 NODE_18261_length_189_cov_110.325 AUGUSTUS exon 2 189 . + . ID=g4806.t1.exon1;Parent=g4806.t1 NODE_18261_length_189_cov_110.325 AUGUSTUS CDS 2 189 . + 2 ID=cds.g4806.t1;Parent=g4806.t1 #PROT g4806.t1 g4806 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL # ORIGINAL: g4586.t1 original gene structure, not modified by PASA NODE_2855_length_4941_cov_35.4344 AUGUSTUS gene 462 2607 . + . ID=g4586;Name=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS mRNA 462 2607 . + . ID=g4586.t1;Parent=g4586;Name=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 462 525 . + . ID=g4586.t1.exon1;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 462 525 . + 1 ID=cds.g4586.t1;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 778 930 . + . ID=g4586.t1.exon2;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 778 930 . + 0 ID=cds.g4586.t1;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 1601 1685 . + . ID=g4586.t1.exon3;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 1601 1685 . + 0 ID=cds.g4586.t1;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 2306 2607 . + . ID=g4586.t1.exon4;Parent=g4586.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 2306 2607 . + 2 ID=cds.g4586.t1;Parent=g4586.t1 #PROT g4586.t1 g4586 RHSEGIDARASERDGVPDAKRARVERLHRAIAIEDLRTAPAPAYVNLKIANQKRYFEGAIASDGANAAAVVELEPRNAQEALASVTKMSAVPKHTSDAQIGTEGTAVASPRARGGHSNKLARACSLVSATGDTDSGLIDDGDVRSSSTDVGPVVALCPMAYSVGMTGEAAPPNAELSDGTLAGSTGMSSERVDLKKDKDN* # ORIGINAL: g4587.t1 original gene structure, not modified by PASA NODE_2855_length_4941_cov_35.4344 AUGUSTUS gene 3837 4713 . - . ID=g4587;Name=g4587.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS mRNA 3837 4713 . - . ID=g4587.t1;Parent=g4587;Name=g4587.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 4698 4713 . - . ID=g4587.t1.exon1;Parent=g4587.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 4698 4713 . - 0 ID=cds.g4587.t1;Parent=g4587.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS exon 3837 4351 . - . ID=g4587.t1.exon2;Parent=g4587.t1 NODE_2855_length_4941_cov_35.4344 AUGUSTUS CDS 3837 4351 . - 2 ID=cds.g4587.t1;Parent=g4587.t1 #PROT g4587.t1 g4587 MAVEEEKKSSAFPVAAVVIPALLLCSLLLGGVVWYRSKLNQLQVKYSRLSQGEPQEVHNDDHDDNDDTAPISRRYDPAPGGDVINPSDAPVQRGAGAFGGSGGGGHVSLRGDRGFSAVRPERCSNATSRGVGGSNAVINTSTNPFASAESASVAVELSAIVHPEPQELDDDPLIGY* # ORIGINAL: g11289.t1 original gene structure, not modified by PASA NODE_4054_length_2269_cov_35.7981 AUGUSTUS gene 116 1397 . - . ID=g11289;Name=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS mRNA 116 1397 . - . ID=g11289.t1;Parent=g11289;Name=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS exon 1187 1397 . - . ID=g11289.t1.exon1;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS CDS 1187 1397 . - 0 ID=cds.g11289.t1;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS exon 808 945 . - . ID=g11289.t1.exon2;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS CDS 808 945 . - 2 ID=cds.g11289.t1;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS exon 388 555 . - . ID=g11289.t1.exon3;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS CDS 388 555 . - 2 ID=cds.g11289.t1;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS exon 116 207 . - . ID=g11289.t1.exon4;Parent=g11289.t1 NODE_4054_length_2269_cov_35.7981 AUGUSTUS CDS 116 207 . - 2 ID=cds.g11289.t1;Parent=g11289.t1 #PROT g11289.t1 g11289 MLDMQHTRILTTQLTAIVLAELTGADAKAHVVEAKFAELVRAKLIRRLEVQDYARGADGAKRAGQEACADGAWRYNDALFELPLQLIEAYGRVPGAATKRKREDDYNDAPPPKKPAGRGQKPKSEPQPPQEPRAPEKPPADIYWIVNADRFVQIFRNDAISNYVAEKLDLPAGRIVATMLRSREHFERPSATLGVPLTETEIH # ORIGINAL: g5755.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 8195 9187 . + . ID=g5755;Name=g5755.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 8195 9187 . + . ID=g5755.t1;Parent=g5755;Name=g5755.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 8195 9187 . + . ID=g5755.t1.exon1;Parent=g5755.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 8195 9187 . + 0 ID=cds.g5755.t1;Parent=g5755.t1 #PROT g5755.t1 g5755 MFPARMLSIDLSGSKKIVDVAHLSDVHTLHLARCVNLEDVSALTSVHTLDLRMSQVSDVSALGRVHTLSLGGSQNLSDVSPLGGVHTLLLHGCASIEIVGQLGRGHTLNLTNCIRVRDVSALGNLHKLVLINCPLVTDASALGRVHSLDLSGTSVADVSALGGVHWLRLANCMQLKDVSALGKVHTLVLSHCESIVEVSSLTGVHTLFLNGCYLITDVLRLGNTRNLDLSGLWRLSDVTALGRVHHLDLTHCASICDISSLTNVHTVRLSGCGSVRNVSSLCAAHSVNLTGCRSVLDFSALDSVCELVYPDGSSRARQQHCTHAQYASVR* # ORIGINAL: g5753.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 4796 5926 . + . ID=g5753;Name=g5753.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 4796 5926 . + . ID=g5753.t1;Parent=g5753;Name=g5753.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 4796 4847 . + . ID=g5753.t1.exon1;Parent=g5753.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 4796 4847 . + 0 ID=cds.g5753.t1;Parent=g5753.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 5121 5926 . + . ID=g5753.t1.exon2;Parent=g5753.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 5121 5926 . + 2 ID=cds.g5753.t1;Parent=g5753.t1 #PROT g5753.t1 g5753 MKVAVLLVSSLLVIAAGVATGQSTTYVNIAWYDNVLECNIDPTNPMRKQSLVAGVCTWAGIGEKNADMYARADVKSDGTVTYLAGFTLSDCSDQPKRTSGHLAASSGSCSSPLFDNVYSPDSNVVMVTVTTSPSYPLTVPQGATSLYVNYVQYGFYHLDQCDGDPLVQFSGKALTCVSSGKSASRFVAYERDYSVVIREFKYPLCSQGFDSSVKVIRLSSSDLTGRCLSGRGVVASLTVKPLYADASATNGVQAADPTGASGAVAPLSYVSVAVASAVALLVLSW* # ORIGINAL: g5758.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 19230 20570 . + . ID=g5758;Name=g5758.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 19230 20570 . + . ID=g5758.t1;Parent=g5758;Name=g5758.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 19230 20570 . + . ID=g5758.t1.exon1;Parent=g5758.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 19230 20570 . + 0 ID=cds.g5758.t1;Parent=g5758.t1 #PROT g5758.t1 g5758 MMAASRLEDLFADSNLFGDASESEVRDRHAKRRRDDDGLEDIPALPPPLSPVRNVDLGDNNDGWRGGEDYGRDDNTNTAEGGEGQGATATRKARKIRRKFDELVLCGGDGLKRIWEEFPKIKFEGKGRETADIRRLMRCYEEWAHKMFPDYTFTDSVERIEKLASMGFVRNYVNSMLDKAKEEEAVKEETAAREEEEWADGLHDDDDDSDEGDARDGPVFMRSNASGAFDAGPSATVTLSSSAVSSVGVANVDNGDNSSATLTDAQAQAIEAKRLAALARLAERKAAAERQQQAATVVPHVVSASHAPSIAPTTDECVEEEEPFEDDYAAFEDAFGRDQKLRQVSSLERRAQDDNGSPRGPEAPAAVRASLLRDFCETLSESTQHDEGKTIDAHEGGSTPATHPTDDEQRAEEGVPLVLLYAETQAPDVMASQVDEDGAFDARDWD* # ORIGINAL: g5756.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 9711 12838 . + . ID=g5756;Name=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 9711 12838 . + . ID=g5756.t1;Parent=g5756;Name=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 9711 10327 . + . ID=g5756.t1.exon1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 9711 10327 . + 0 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 10594 10703 . + . ID=g5756.t1.exon2;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 10594 10703 . + 1 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 10833 10890 . + . ID=g5756.t1.exon3;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 10833 10890 . + 2 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 11066 11119 . + . ID=g5756.t1.exon4;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 11066 11119 . + 1 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 11525 11663 . + . ID=g5756.t1.exon5;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 11525 11663 . + 1 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 12042 12135 . + . ID=g5756.t1.exon6;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 12042 12135 . + 0 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 12421 12529 . + . ID=g5756.t1.exon7;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 12421 12529 . + 2 ID=cds.g5756.t1;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 12802 12838 . + . ID=g5756.t1.exon8;Parent=g5756.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 12802 12838 . + 1 ID=cds.g5756.t1;Parent=g5756.t1 #PROT g5756.t1 g5756 MSSMGSPSRIVRVSKTLSYILRHGAQELGLSMDSSGCVSMDDLMRLLSAKPYLYTLEDVMRAVSDNNKKRFEVLRRDNGRDYIRAVQGHSASFDAVIDEEALMERITVPMPLCIHGTDDRALSAILESGLRPMSRMHIHFASSEHTQSGLRVNASVHIYLDMAKAMEAGIPFFLSKNGVILSPGKDGIIAPEFFARVVNVRASRGRDSALLRLGLGSRCALLLAMDDAAGPNPSRDLAVSCRDLNSSHHRRRSSARNSDADIHVVDPATDNETTAKELAKEDNAAIRQMQDELAAISRSFQQGEMMAFGRESEAVFANLDRIRRMQEGLALEHAAMEMNATDIFSEAERRGQSGPEADHDANGSLKDRLFKLFEQDEVKITSLMDHLDNVRVELEKLHGAIIDRK* # PASA_UPDATE: g5754.t1, single gene model update, valid-1, status:[pasa:asmbl_7431,status:3], valid-1 NODE_454_length_23429_cov_42.3758 . gene 6197 7598 . - . ID=g5754;Name=g5754.t1 NODE_454_length_23429_cov_42.3758 . mRNA 6197 7598 . - . ID=g5754.t1;Parent=g5754;Name=g5754.t1 NODE_454_length_23429_cov_42.3758 . five_prime_UTR 7540 7598 . - . ID=g5754.t1.utr5p1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . exon 7537 7598 . - . ID=g5754.t1.exon1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . CDS 7537 7539 . - 0 ID=cds.g5754.t1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . exon 7158 7319 . - . ID=g5754.t1.exon2;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . CDS 7158 7319 . - 0 ID=cds.g5754.t1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . exon 6711 6912 . - . ID=g5754.t1.exon3;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . CDS 6711 6912 . - 0 ID=cds.g5754.t1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . exon 6197 6319 . - . ID=g5754.t1.exon4;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . CDS 6243 6319 . - 2 ID=cds.g5754.t1;Parent=g5754.t1 NODE_454_length_23429_cov_42.3758 . three_prime_UTR 6197 6242 . - . ID=g5754.t1.utr3p1;Parent=g5754.t1 #PROT g5754.t1 g5754 MSAHFPAVRPDAAPATSVAASAEGPFELHDTMRFGLHHTITDIAPKHPIEVIQERFDSNSDALRLAMLGKVQGSQAVMRMRMERNILSSVGGRMPGMDSNRLGLETINGTDTLLAGFEDILNDPREALSMGAPHDMMEARLGMRFSR* # ORIGINAL: g5752.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 2815 3980 . + . ID=g5752;Name=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 2815 3980 . + . ID=g5752.t1;Parent=g5752;Name=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 2815 2881 . + . ID=g5752.t1.exon1;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 2815 2881 . + 0 ID=cds.g5752.t1;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 3016 3113 . + . ID=g5752.t1.exon2;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 3016 3113 . + 2 ID=cds.g5752.t1;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 3229 3654 . + . ID=g5752.t1.exon3;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 3229 3654 . + 0 ID=cds.g5752.t1;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 3897 3980 . + . ID=g5752.t1.exon4;Parent=g5752.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 3897 3980 . + 0 ID=cds.g5752.t1;Parent=g5752.t1 #PROT g5752.t1 g5752 MQCLVERHFGRTAGRKAHQIQLDLIGALGIKPAVLVDYSSASPVQVASFVAEAAKVVDPLFSRLRVLSFDDGERGVFIVNPTLLLQDMRETAPFLLSSDNSRPLVLVDASTGSPSRAPSLIKRDVHANHPSLMTLTAAWSLIESALEDASLDAKDGKTATATALDIIDLKSDNCWCMTSVAGWMLGYPAVYWTPAEATGNSLGGVALVVHRAEVTFPGRQVELC* # ORIGINAL: g5757.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 13745 18576 . - . ID=g5757;Name=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 13745 18576 . - . ID=g5757.t1;Parent=g5757;Name=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 18516 18576 . - . ID=g5757.t1.exon1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 18516 18576 . - 0 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 17960 18369 . - . ID=g5757.t1.exon2;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 17960 18369 . - 2 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 17264 17815 . - . ID=g5757.t1.exon3;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 17264 17815 . - 0 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 15280 17081 . - . ID=g5757.t1.exon4;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 15280 17081 . - 0 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 14755 14951 . - . ID=g5757.t1.exon5;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 14755 14951 . - 1 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 14299 14442 . - . ID=g5757.t1.exon6;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 14299 14442 . - 2 ID=cds.g5757.t1;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 13745 14142 . - . ID=g5757.t1.exon7;Parent=g5757.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 13745 14142 . - 2 ID=cds.g5757.t1;Parent=g5757.t1 #PROT g5757.t1 g5757 MEVLNASERQTPDLVRTPSCSSSAGFNEPPAGFDDRVVLYLRNSRLTSVAEYNVMLREVVNHWQDALTRPTTSANLPATSPPHSPQKNGRSVPIAESPSPVGREFSRQPSAEAGDNFISFLTMLLFEVARTENRFKQKENLDKVFSWYTRNRESKRTNLTVTGAPVHWVDTSSILYPPRNIARPASTEPSRPHLIGIVGVGRKPADAYGMANRAKSETQKKPATTGSKRFEARKRLEMEEKLQKQLEERRAKLVQQKHTAFRGMFADTGSVDFIKWGEAALQVTVPNIRPPIPGRVHWSSAAFGPSEGIRRRSIAAQKGETMRAKGQIQQTPNATEGLHAQPQLPQLHSPLPARAPLRRSTQLPALEYDRWILSSDYVMKQVGGELLADVLPQHKKVKPSIRRTYTPGRLLSRADTIDSYGRGFSPEISTNDYAAEDENGGDEDEEADADPDADANADEDADAAADDSASDEDTGADGNATADRDADPDAEGDAYGTFEDWNDAYGEDGAADVSGVGGDASESRDEGRDDVRSIKSPTLPYGAASPRMLSVNSVVAGDKSPEKKDKGSTAASTHGSLVHGSGLVGCELVGGCPPGYQAGKKSDAKPRYTAAYVHQFPDPSKSAASPSHASDDDVRSEPGDDDTDVPANDASDDGNDEVADNDDQTTLDVDGTDADAHMGTHSDATAKESKKSRSPSPLQPTPKTPPAHPNAHEKPVQNTAKSTVPAGVITVPVASPVTASGKESSADTVPNTGNAVPQLTLNVANAGSLLNAANAGLSPNAGHMVALDQNKASDQGRRPSLQIGRGEGRRLSVADDIAPPEEMMRLAGRRLSLSQDYKTEKERIDDVQKAGGTPGDIEALKQEAAALLIQRTFRGHLVRKIESKILPKEETVTWARQYKHELDRRQKEREEKAAVVLQSSYRGFKLRKSELEKILASKRIHDLFRGFRTRMLRRKLERQCVNMGCGVQEIFFDYRTFVDIITTSLGLPKKQYAVEYEHVIAWLKERDELRAVFERMCDPTTMRILKSVIPELCKELGHFPSAAEIRIACARFNIQGETLSEFDTERIVFSIYPPPSVEQPKRVSTWTNPIVKSTEAMSVADKLKESVMLKKAMELVLNAKQTPIADSKSAEKPSTPSKGDKANPLDKSAIAKRKMADGPSASGSARRSGTSIPPPSPQKGKGSAKKK* # ORIGINAL: g5751.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 249 1451 . + . ID=g5751;Name=g5751.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 249 1451 . + . ID=g5751.t1;Parent=g5751;Name=g5751.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 249 1451 . + . ID=g5751.t1.exon1;Parent=g5751.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 249 1451 . + 0 ID=cds.g5751.t1;Parent=g5751.t1 #PROT g5751.t1 g5751 MSRLPTSFSSLPDEVVVYHIVPFLSNKDCRSLAYVNSRLRTWLAHMHFYTLKLQYCDKYSVDANFRQEVWNHIPMELLILTFQHSRVNDVSALAGVYSLNLEGTGVTDVSALGNVHSLNLRYCGGVTDVSALGGVHALDLSGCNGVIDVSGLGGVHSLNLERCEGATDVSALGGVHSLNLSYCNGVTDVSGLGRVHSLDLSYCNEVTDVSALGDVYSLNLSDCKGLSDVSALGKVHSLDLSYCERVTVVSALGGVHSLKLAGCRGVTDVSALCGVHSLNLTCCEGVTEVSTLGGIHSLNLSGCRRVINVSALGGVHSLNLSGCIGVTDVSALCGVHSLDLSFCQGVVDVSRLGGVHSLDLSFCHLVTDVSALSSVHSLNLSYCGATDVSVLGGVHTLTLY* # ORIGINAL: g5759.t1 original gene structure, not modified by PASA NODE_454_length_23429_cov_42.3758 AUGUSTUS gene 21052 23390 . - . ID=g5759;Name=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS mRNA 21052 23390 . - . ID=g5759.t1;Parent=g5759;Name=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 23243 23390 . - . ID=g5759.t1.exon1;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 23243 23390 . - 0 ID=cds.g5759.t1;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 22265 23067 . - . ID=g5759.t1.exon2;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 22265 23067 . - 2 ID=cds.g5759.t1;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 21544 22044 . - . ID=g5759.t1.exon3;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 21544 22044 . - 0 ID=cds.g5759.t1;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 21342 21434 . - . ID=g5759.t1.exon4;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 21342 21434 . - 0 ID=cds.g5759.t1;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS exon 21052 21126 . - . ID=g5759.t1.exon5;Parent=g5759.t1 NODE_454_length_23429_cov_42.3758 AUGUSTUS CDS 21052 21126 . - 0 ID=cds.g5759.t1;Parent=g5759.t1 #PROT g5759.t1 g5759 MCVFIPAADESLTLQVASIWADYEEEYALAQNRHRMELEELKARHMREALDRRVRRLADPLSLAARVAPAAAAGVQEEASEATEAADTVALRTPLAAAIGPAPTAPANAVLHTHEHVVAAATAVPETAPHEPHEPSAVADMQACTMSVPLLSLPSARTVVYHACASEDELDIPLADRIRSRIGPAVGIVESRASGAVGSRNALGKRVATVSPNRPSQRKRVRLDSVASEGSTASSNVGRGRNASVTKSTSGGVMASSASSAADVGRRGGTSVQQQEQSRAGARKAAPAAKSRGRAKDSVWDSDTVPDFKALDTPVLKRYVDKYGIRHGPKSTMAQRIEVVWKSLNGVPLDGDGGADDGCADTHSEVDHMDGDAADSDDGAFGMEDAFGDDNRGHALAEPAPIAKKTTVAAKTKRTGKAAGRKKTASRGEKNADQDDVGGEGGDNESDGEDNGNLTMDEQAQLACALVGYMRDTPDLHLKVLTFQPIEFDELRRNLRLAGIKKITIGFLEDWLDQQGICYYKSKVRRQMTRWTQGKDKRK* # PASA_UPDATE: g10839.t1, single gene model update, valid-1, status:[pasa:asmbl_9933,status:12], valid-1 NODE_9048_length_346_cov_37.6273 . gene 1 346 . - . ID=g10839;Name=g10839.t1 NODE_9048_length_346_cov_37.6273 . mRNA 1 346 . - . ID=g10839.t1;Parent=g10839;Name=g10839.t1 NODE_9048_length_346_cov_37.6273 . five_prime_UTR 346 346 . - . ID=g10839.t1.utr5p1;Parent=g10839.t1 NODE_9048_length_346_cov_37.6273 . exon 1 346 . - . ID=g10839.t1.exon1;Parent=g10839.t1 NODE_9048_length_346_cov_37.6273 . CDS 1 345 . - 0 ID=cds.g10839.t1;Parent=g10839.t1;5_prime_partial=true;3_prime_partial=true #PROT g10839.t1 g10839 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG # ORIGINAL: g11877.t1 original gene structure, not modified by PASA NODE_3169_length_4122_cov_39.8624 AUGUSTUS gene 208 349 . - . ID=g11877;Name=g11877.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS mRNA 208 349 . - . ID=g11877.t1;Parent=g11877;Name=g11877.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS exon 208 349 . - . ID=g11877.t1.exon1;Parent=g11877.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS CDS 208 349 . - 0 ID=cds.g11877.t1;Parent=g11877.t1 #PROT g11877.t1 g11877 MASMRVVVAVVVVLAACSLNAQAQFVELFDNTTLYDRLWSAVPLASS # ORIGINAL: g11878.t1 original gene structure, not modified by PASA NODE_3169_length_4122_cov_39.8624 AUGUSTUS gene 872 1075 . + . ID=g11878;Name=g11878.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS mRNA 872 1075 . + . ID=g11878.t1;Parent=g11878;Name=g11878.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS exon 872 1075 . + . ID=g11878.t1.exon1;Parent=g11878.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS CDS 872 1075 . + 0 ID=cds.g11878.t1;Parent=g11878.t1 #PROT g11878.t1 g11878 MGRRCKVNKNVGEGPILRVKPAAVLAEPAAVASGAAAKETYKQKDGHMPLDDAEQVRVARELEALRP* # ORIGINAL: g11879.t1 original gene structure, not modified by PASA NODE_3169_length_4122_cov_39.8624 AUGUSTUS gene 2778 3947 . + . ID=g11879;Name=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS mRNA 2778 3947 . + . ID=g11879.t1;Parent=g11879;Name=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS exon 2778 2939 . + . ID=g11879.t1.exon1;Parent=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS CDS 2778 2939 . + 0 ID=cds.g11879.t1;Parent=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS exon 3126 3307 . + . ID=g11879.t1.exon2;Parent=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS CDS 3126 3307 . + 0 ID=cds.g11879.t1;Parent=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS exon 3650 3947 . + . ID=g11879.t1.exon3;Parent=g11879.t1 NODE_3169_length_4122_cov_39.8624 AUGUSTUS CDS 3650 3947 . + 1 ID=cds.g11879.t1;Parent=g11879.t1 #PROT g11879.t1 g11879 MPAVSFALVLVGLLSHSVGVSAVGLGSIVANFTIAHTTSIMGVVAPTAATTASQAEFGGLARISGFMQNMTASRPEGSVLILDPGSVASSTLFSQFYEGKKLPEFLRKIGYSAVGVGTGDLFFGPNAYADAYGGGKGPTLVITNVNVRPSHALALVVKKELVVTVTTTQGTDVSVGILGATDEGACGPEMGCLQFAFCCLVLRIHPFAWGSNA* # PASA_UPDATE: g11279.t1, single gene model update, valid-1, status:[pasa:asmbl_6638,status:12], valid-1 NODE_3841_length_2646_cov_41.7884 . gene 27 1710 . - . ID=g11279;Name=g11279.t1 NODE_3841_length_2646_cov_41.7884 . mRNA 27 1710 . - . ID=g11279.t1;Parent=g11279;Name=g11279.t1 NODE_3841_length_2646_cov_41.7884 . five_prime_UTR 1645 1710 . - . ID=g11279.t1.utr5p1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 1360 1710 . - . ID=g11279.t1.exon1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 1360 1644 . - 0 ID=cds.g11279.t1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 1204 1235 . - . ID=g11279.t1.exon2;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 1204 1235 . - 0 ID=cds.g11279.t1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 920 985 . - . ID=g11279.t1.exon3;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 920 985 . - 1 ID=cds.g11279.t1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 712 759 . - . ID=g11279.t1.exon4;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 712 759 . - 1 ID=cds.g11279.t1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 365 435 . - . ID=g11279.t1.exon5;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 365 435 . - 1 ID=cds.g11279.t1;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . exon 27 86 . - . ID=g11279.t1.exon6;Parent=g11279.t1 NODE_3841_length_2646_cov_41.7884 . CDS 27 86 . - 2 ID=cds.g11279.t1;Parent=g11279.t1;3_prime_partial=true #PROT g11279.t1 g11279 MKFLWHPRALPLPSPLQLQSHARSALAVTVALIILTAASLAVAKTPNAQTAPSAQESRVDTPLSSVEPQAHPQFDAARTDKMSVVVPATAKQTATVIFLHGLGDSGHGWAPVMKMIKSPHIKYICPNAPVAKVTLNMGMNMPSWYDIIGLHEDAAEDAAGHERTRNQIREIIAEENKAGIPSNRIIL # PASA_UPDATE: g9753.t1, single gene model update, valid-1, status:[pasa:asmbl_4011,status:12], valid-1 NODE_2308_length_6775_cov_41.8818 . gene 115 778 . - . ID=g9753;Name=g9753.t1 NODE_2308_length_6775_cov_41.8818 . mRNA 115 778 . - . ID=g9753.t1;Parent=g9753;Name=g9753.t1 NODE_2308_length_6775_cov_41.8818 . five_prime_UTR 709 778 . - . ID=g9753.t1.utr5p1;Parent=g9753.t1 NODE_2308_length_6775_cov_41.8818 . exon 617 778 . - . ID=g9753.t1.exon1;Parent=g9753.t1 NODE_2308_length_6775_cov_41.8818 . CDS 617 708 . - 0 ID=cds.g9753.t1;Parent=g9753.t1 NODE_2308_length_6775_cov_41.8818 . exon 115 401 . - . ID=g9753.t1.exon2;Parent=g9753.t1 NODE_2308_length_6775_cov_41.8818 . CDS 115 401 . - 1 ID=cds.g9753.t1;Parent=g9753.t1;3_prime_partial=true #PROT g9753.t1 g9753 MASCDLCREIFGPSEQIINASGKRWHQRCFVCVQCFQPFKDSMHYDHEGKCYCESDFMVLFGPRCAGCNEYILGKCITALDAKWHPEHFVCVTCNSSLAGGSFVRKNGKPMCKSCSRSVTPVGVKG # ORIGINAL: g9754.t1 original gene structure, not modified by PASA NODE_2308_length_6775_cov_41.8818 AUGUSTUS gene 1341 3786 . - . ID=g9754;Name=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS mRNA 1341 3786 . - . ID=g9754.t1;Parent=g9754;Name=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 3724 3786 . - . ID=g9754.t1.exon1;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 3724 3786 . - 0 ID=cds.g9754.t1;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 2981 3193 . - . ID=g9754.t1.exon2;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 2981 3193 . - 0 ID=cds.g9754.t1;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 2672 2755 . - . ID=g9754.t1.exon3;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 2672 2755 . - 0 ID=cds.g9754.t1;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 1341 2438 . - . ID=g9754.t1.exon4;Parent=g9754.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 1341 2438 . - 0 ID=cds.g9754.t1;Parent=g9754.t1 #PROT g9754.t1 g9754 MQTFMVVRCCADHCATFQVHQTFVEGAAAHCRVAVQGLNKRTIGGAIDVAHTLLTTPRYDEDGCFNGSGCDGANYADCGDPAYGASSSDVNVESVDWSSAPRGESKWAAYTDNGLSKAEESDDDDDPRFTTVFSVQKKRGSRRNGDTVARAQPAAKRRRACDSPDGDEKDDWDGRVSRAQTRTRRNGIGMRSPPASDWKKHRTEETVTSRWISRDEDVMKIDAVKPILHTAPRAHSGGPAAPIATAHRSSALEQSVRPTFASSAGEIIAQTENARAMASSPLLSSNACHLGATASMDEAMGASRGQSLATLQQSNVRVNDSGDYCDNIDALDFLVEDDDSPFVTGMRAHSHPPAPVPAPEPVPVTAPVHVSTSEGDWSVKPTPGAWHAHARQIVPMRAVSVAIASPTTASAHITSVPSMIRHGATLQVCLPVRAAPTAVTATAATVTATATATATGMKRPAVPPRRAPSKWDAFLPPPVDSDDSD* # ORIGINAL: g9755.t1 original gene structure, not modified by PASA NODE_2308_length_6775_cov_41.8818 AUGUSTUS gene 4927 5776 . + . ID=g9755;Name=g9755.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS mRNA 4927 5776 . + . ID=g9755.t1;Parent=g9755;Name=g9755.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 4927 5098 . + . ID=g9755.t1.exon1;Parent=g9755.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 4927 5098 . + 0 ID=cds.g9755.t1;Parent=g9755.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS exon 5358 5776 . + . ID=g9755.t1.exon2;Parent=g9755.t1 NODE_2308_length_6775_cov_41.8818 AUGUSTUS CDS 5358 5776 . + 2 ID=cds.g9755.t1;Parent=g9755.t1 #PROT g9755.t1 g9755 MERRTVVVERSPVAEALDDFCLMLLAILFPPAAVLIRTGCGGSFCLNLLLTLLGWLPGVIHAFFVIAAHPPEPVYVAEIPSGPPIVVVEQAMPSQRPLQGTVYYATNAESQPFYSPGYTKASSSASYPHPQHQQHQHQQHQQQQQQQQQPTYSQGMYPPPQQQQQPQYGYNSPGAAHQQPYYPPPPAGAPPSYGST* # PASA_UPDATE: g4461.t1, single gene model update, valid-1, status:[pasa:asmbl_7644,status:12], valid-1 NODE_480_length_22844_cov_40.8884 . gene 136 4101 . - . ID=g4461;Name=g4461.t1 NODE_480_length_22844_cov_40.8884 . mRNA 136 4101 . - . ID=g4461.t1;Parent=g4461;Name=g4461.t1 NODE_480_length_22844_cov_40.8884 . five_prime_UTR 3806 4101 . - . ID=g4461.t1.utr5p1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 3682 4101 . - . ID=g4461.t1.exon1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 3682 3805 . - 0 ID=cds.g4461.t1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 3335 3476 . - . ID=g4461.t1.exon2;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 3335 3476 . - 2 ID=cds.g4461.t1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 3016 3145 . - . ID=g4461.t1.exon3;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 3016 3145 . - 1 ID=cds.g4461.t1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 2551 2656 . - . ID=g4461.t1.exon4;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 2551 2656 . - 0 ID=cds.g4461.t1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 2087 2379 . - . ID=g4461.t1.exon5;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 2087 2379 . - 2 ID=cds.g4461.t1;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . exon 136 1852 . - . ID=g4461.t1.exon6;Parent=g4461.t1 NODE_480_length_22844_cov_40.8884 . CDS 136 1852 . - 0 ID=cds.g4461.t1;Parent=g4461.t1;3_prime_partial=true #PROT g4461.t1 g4461 MSLSEVFEEAMATGLLDLKDRRIKSWPEGVEEYDLSEITELDISSNRFAALPDEVACMVSLETLNCYKNLIVQLPQLSTLQCLLTVNLSRNQLAALPTDLCNLPHLKVLNVSNNKITFIPREIGQMKTLRELDVSNNELVGIPDEIVRLEDLKDLNLCRNHITSFPADIGSLHLTRLDFSDNSVTNIPISFGHMHTLTTLILDNNPLSCPPAHVCARGRMHIFKFLNELEEQQRNGDRPPPVLKRLSAAQLFIEQESRRKSLENQRRDSVELVGKPAVPVADVPSTSSAATVQSPQPHSAPSSHASHAHAHAEPPTSNGLQTSSNSAFHHAAKVIAQPQAQAQDPVHAAAHVTAHVAAAPAPASPAPKQKAVSPVPHAKAPAATVTATATAAASTLPQYKTAAPVAANGTDKPHATPAAAVAPSARHVTPAAPTTAPTAPAPTHAATTAPTAPALNHAASAAPTHAAAPTAPAPTAGSSSLLGLKTESGATPRSPMPQRRPSESDAEFYRRAADEERVRKESLLKMKEKAIELRRKSSDPSSAAVAAAAAAAVESMGLSVNAPTRRSSENSALRTQSVPEGDLRKRMQEDAVLAMLPPTVSDAVKEKADLERRLSEARERKATLEARIAEMEKNKKLGRSSSEASVSPPSNGTTKAPSPTAASTGAPTAPTATTATAAAAVTATATTSTTTAPAKAASTTTQSSATSTSPSKIATTTTSPAKSTSPSKSATTATSPATTTSAKASTPAVAVTAPAPAAAKTAPVAPTVAVPPASTSLAVAPESPRRHSDAPPPSADGKLGAPEQPARPLSGSAADEAMWAKMTAAPKKDAVSSMKKG # PASA_UPDATE: g4463.t1, single gene model update, valid-1, status:[pasa:asmbl_7645,status:3], valid-1 NODE_480_length_22844_cov_40.8884 . gene 10975 11711 . - . ID=g4463;Name=g4463.t1 NODE_480_length_22844_cov_40.8884 . mRNA 10975 11711 . - . ID=g4463.t1;Parent=g4463;Name=g4463.t1 NODE_480_length_22844_cov_40.8884 . five_prime_UTR 11652 11711 . - . ID=g4463.t1.utr5p1;Parent=g4463.t1 NODE_480_length_22844_cov_40.8884 . exon 11628 11711 . - . ID=g4463.t1.exon1;Parent=g4463.t1 NODE_480_length_22844_cov_40.8884 . CDS 11628 11651 . - 0 ID=cds.g4463.t1;Parent=g4463.t1 NODE_480_length_22844_cov_40.8884 . exon 10975 11407 . - . ID=g4463.t1.exon2;Parent=g4463.t1 NODE_480_length_22844_cov_40.8884 . CDS 10988 11407 . - 0 ID=cds.g4463.t1;Parent=g4463.t1 NODE_480_length_22844_cov_40.8884 . three_prime_UTR 10975 10987 . - . ID=g4463.t1.utr3p1;Parent=g4463.t1 #PROT g4463.t1 g4463 MTSTTEHKVFEGVYMTDYRKKPAPQQQLPTQNNENSANESSRALDSDKPQSRSDAIAALESHFASSAELVQDEIARLRNSVAHLERSNAEMVEADASDPDFAAAIAENGEVIRRQNAKADDLQKELDKLLAVDIRKETAVPDAGVWL* # PASA_UPDATE: g4462.t1, single gene model update, valid-1, status:[pasa:asmbl_7641,status:12], valid-1 NODE_480_length_22844_cov_40.8884 . gene 4866 10926 . + . ID=g4462;Name=g4462.t1 NODE_480_length_22844_cov_40.8884 . mRNA 4866 10926 . + . ID=g4462.t1;Parent=g4462;Name=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 4866 5530 . + . ID=g4462.t1.exon1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 4866 5530 . + 0 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 5630 7728 . + . ID=g4462.t1.exon2;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 5630 7728 . + 1 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 7845 8208 . + . ID=g4462.t1.exon3;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 7845 8208 . + 2 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 8350 8479 . + . ID=g4462.t1.exon4;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 8350 8479 . + 1 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 8642 8880 . + . ID=g4462.t1.exon5;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 8642 8880 . + 0 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 9026 9161 . + . ID=g4462.t1.exon6;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 9026 9161 . + 1 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 9319 9513 . + . ID=g4462.t1.exon7;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 9319 9513 . + 0 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 9654 9917 . + . ID=g4462.t1.exon8;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 9654 9917 . + 0 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 10161 10335 . + . ID=g4462.t1.exon9;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 10161 10335 . + 0 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . exon 10712 10926 . + . ID=g4462.t1.exon10;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . CDS 10712 10800 . + 2 ID=cds.g4462.t1;Parent=g4462.t1 NODE_480_length_22844_cov_40.8884 . three_prime_UTR 10801 10926 . + . ID=g4462.t1.utr3p1;Parent=g4462.t1 #PROT g4462.t1 g4462 MDDIVRTALEAIALSVDGVLVRGIWTATSEWHAQLSEFAPMEGRRPVRPLSYDLSDPDVSVAAWRCILERIDKGVVLLKSDGDVQPTAKAEPASYDASDRLVASEQLVLDVLLIDGVTAPLLKPVHLYLLTAMARSGPKGVMQKDLMDCVKRVITTPAEGKATDGSDLAKAVFHHCKFLRLRRLAVVKSSLSNVWRLQRYRDVALDTPKRRLLKKFRESADKDGCVWQTELDWKELNFISPKSLAQCLRNWEDAKFLNVETAKKRVRYKLADGAKIDDSADDDEDEDHDAPSVREEDAVCYVADKCLLAQVHDLIDSATTIGIGQPDIIARMGIKTKLVEKVVTLLKRDYGVRGEWTFRNGRRINALFTKHNWTKKLEQGDSARVGESRGALSPGHVPDENAASVVNEQRPPQQQPHPIDQHAPPQPPQPQQQHHEQRQPPYQQAPEPSQPQPAPPRLPNSRKPRESTDVAKRRSDFVGAYVAAHRIVIFSVLLVKVIENEKSCGGVASIDRKTLKGILEDLRLPIVKRLSHGRTSVYFVRSALATDEEVDEFCENHAYTSTGPQIGGKKSVIRERGTISPTALKEAPAAPTHEVGQKEAHGRFVRAKVVHLFLLDRWRSGIPTFRKPFTLMSAWDNMPFGTFLQAFGPSSLVTVLPDASTLLRDVGPDLRQTLAQAAKRKFHEALLTLVCLNFVKLFQEKKFELIVPPTVTINDTIAVFSERSPLAPAVKTPDGSIAVKSDGKKAKTAMELYDQNQKREPGKIYRVLAIDGISHKHFNLEDEFGAYAFWACLQRVACQLHKTDTDFRQYMLGSAANWLERGLSNLEELVEAWRAFSKAQRRTLMDLVGVRDHFDRFRVKYSLHLSRAVHVGVNAPYYTKLAKRLREARETDTIASNKRKATGSADANRSNKRPRGESSQEGEQIRRKKKKSTHTYPSESAIPQRLSLATNIWTSYMDAILLAARAVLSESTPEKQLNLARDVLTAGGVTWVNVGLIEARMAEIDRDLRADALALSFATAAQALLRENMTEIEMVFTVARNSRVDESTLPPPDAALAVQNTSLFGQKAPAWQSLKQDKWMAMEETRLAIWSRMVLCERTADQNELDSALLKIHNYAEADGRESSLACGINLLQTAGIARLQKSGDTRALLGKKPYTLTNSYTLTKRSTDGLRPRVPGDVLRQISSTEQIVVDSKMNGGAVARSLELMAAGQGRLAVQLEGAMTGRGVPIVTCSWAAAHAPSVMMDSNWDAVSAEDAQTVKRLVDDAPEGCTLAEIVALSGLSPSLVARTLDALVKEGCVFIVGISVPLYVNEQGATQWRLTVQGKAGPVVVPWLWPDGRTNDVAYRQLMNFVTDIVIANPGIPEGRVVDHLKLHISPRCTVQLLRDLVAEKTLVARFTQIAAVSEFSLFSEVEDALPSTESHGAIEACYYANAGALSIIARDTPKPQAMEI* # PASA_UPDATE: g4466.t1, single gene model update, valid-1, status:[pasa:asmbl_7640,status:12],[pasa:asmbl_7646,status:12], valid-1 NODE_480_length_22844_cov_40.8884 . gene 16394 19653 . - . ID=g4466;Name=g4466.t1 NODE_480_length_22844_cov_40.8884 . mRNA 16394 19653 . - . ID=g4466.t1;Parent=g4466;Name=g4466.t1 NODE_480_length_22844_cov_40.8884 . five_prime_UTR 19516 19653 . - . ID=g4466.t1.utr5p1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . exon 17884 19653 . - . ID=g4466.t1.exon1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . CDS 17884 19515 . - 0 ID=cds.g4466.t1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . exon 17480 17658 . - . ID=g4466.t1.exon2;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . CDS 17480 17658 . - 0 ID=cds.g4466.t1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . exon 17092 17298 . - . ID=g4466.t1.exon3;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . CDS 17092 17298 . - 1 ID=cds.g4466.t1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . exon 16806 16923 . - . ID=g4466.t1.exon4;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . CDS 16806 16923 . - 1 ID=cds.g4466.t1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . exon 16394 16651 . - . ID=g4466.t1.exon5;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . CDS 16442 16651 . - 0 ID=cds.g4466.t1;Parent=g4466.t1 NODE_480_length_22844_cov_40.8884 . three_prime_UTR 16394 16441 . - . ID=g4466.t1.utr3p1;Parent=g4466.t1 #PROT g4466.t1 g4466 MRDAVSRGDADVDATLAFLETTHAPPPRAPSADKEAYRERMSVIEVQARAYGLAPGHVSAVVALATRGGLHDSLAKRLFKALVPRTTVPESCVVTAIARFNMRLDTTGECVISLGIRGYFLRWLLAVFELLDSRVSLHRLYGVLFRLLWFDSLRADACHLLYLLTRPSDVQHFRIQRLLELESQVGSEAPLVALLGAYRALSPSSDIHVADNAPQSFRPPSAKLQEVIRAVHERMAAAAVPARHPGSQQPGSLHAVAAADGGASSVWSSSSTEVVAARSRKRLRVDPVIPPPRSGMSVVAGIDTSTGLSSFESIASLQDLCAKIDSLELPSQAAAVLGSRAVQHVVACSPSARASICTRLAAWLQATLASELVPGRGGSVTVVAASRVEASSRSRRLLGALVDLVDFMHDAPPVLGAFLGTYLPTWNGIDHADLVLRLVSRTRPCAYEELYAGILRPINALFFTSPPQTKVRILLCYRDMVARFALTLRRAGLVSGGVTGRGRDAEGGQAGAFVFGPLAANVDHHRTLYEFVRHVDSMAVLGMECESDHAALHDAALAFYETVVEFNLHYGLPFLMVPSEGIVYRCFFASNAMAVSRIAGLIARYKTAFDALKEKQVQSRGSGGQLPRLTIPTGLERLDLFNGYIMEFCNVLWRNRVLPEDGSDVSNCFDLPRESKLQLRASLPGMNNLFSVTQSPVFCSMTRQYLIECQQQVAASEGRDVDLAGIRPSVIKDRFRVPFLDFLRSRNVVGVYEFLYTFIHSLVQRRVKGLERRVADDAFAM* # ORIGINAL: g4467.t1 original gene structure, not modified by PASA NODE_480_length_22844_cov_40.8884 AUGUSTUS gene 21280 22467 . - . ID=g4467;Name=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS mRNA 21280 22467 . - . ID=g4467.t1;Parent=g4467;Name=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 22387 22467 . - . ID=g4467.t1.exon1;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 22387 22467 . - 0 ID=cds.g4467.t1;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 22104 22202 . - . ID=g4467.t1.exon2;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 22104 22202 . - 0 ID=cds.g4467.t1;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 21855 21908 . - . ID=g4467.t1.exon3;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 21855 21908 . - 0 ID=cds.g4467.t1;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 21553 21651 . - . ID=g4467.t1.exon4;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 21553 21651 . - 0 ID=cds.g4467.t1;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 21280 21375 . - . ID=g4467.t1.exon5;Parent=g4467.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 21280 21375 . - 0 ID=cds.g4467.t1;Parent=g4467.t1 #PROT g4467.t1 g4467 MAEDKELRRTLQSLACGKVRVLNKIPKGKDVEDGDAFQFNDEFVNKLTRIKINQIQLKETVEENTNTTEKVFQDRQYQVDAAIVRIMKTRKNLSHTLLISELFNQLKFPVKPADLKKRIESLIDREYLQRDKDNATIYNYLA* # ORIGINAL: g4464.t1 original gene structure, not modified by PASA NODE_480_length_22844_cov_40.8884 AUGUSTUS gene 12309 13196 . + . ID=g4464;Name=g4464.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS mRNA 12309 13196 . + . ID=g4464.t1;Parent=g4464;Name=g4464.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 12309 12585 . + . ID=g4464.t1.exon1;Parent=g4464.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 12309 12585 . + 0 ID=cds.g4464.t1;Parent=g4464.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 12658 13196 . + . ID=g4464.t1.exon2;Parent=g4464.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 12658 13196 . + 2 ID=cds.g4464.t1;Parent=g4464.t1 #PROT g4464.t1 g4464 MDVDQKRVLDLSPDRLDAIDSADPALIDDIAVHAPVKKVLGFYEEIRAACTPKVLDALALATSVPRHRFGAPLAAYRTVDYYERPMATAGADHFGFFTLIFQNDVSGLEVKCPDGEWRLIDLEAGEAVVVFGWASHVLSNGRVRAVTHRVVDSAARSCHVTGNVSRRRLAAVVFVAPEPALPLTPVVHPGESAMYGTLVAGDLKERMARLWRRREGTLDDSERAEEDRVARVTGLRTQADVVRTLELRRGAAGLGVMQVQMQHLSHRGIPV* # ORIGINAL: g4465.t1 original gene structure, not modified by PASA NODE_480_length_22844_cov_40.8884 AUGUSTUS gene 13671 16131 . + . ID=g4465;Name=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS mRNA 13671 16131 . + . ID=g4465.t1;Parent=g4465;Name=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 13671 13772 . + . ID=g4465.t1.exon1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 13671 13772 . + 0 ID=cds.g4465.t1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 14119 14224 . + . ID=g4465.t1.exon2;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 14119 14224 . + 0 ID=cds.g4465.t1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 14347 14517 . + . ID=g4465.t1.exon3;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 14347 14517 . + 2 ID=cds.g4465.t1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 14847 15036 . + . ID=g4465.t1.exon4;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 14847 15036 . + 2 ID=cds.g4465.t1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 15241 15360 . + . ID=g4465.t1.exon5;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 15241 15360 . + 1 ID=cds.g4465.t1;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS exon 15615 16131 . + . ID=g4465.t1.exon6;Parent=g4465.t1 NODE_480_length_22844_cov_40.8884 AUGUSTUS CDS 15615 16131 . + 1 ID=cds.g4465.t1;Parent=g4465.t1 #PROT g4465.t1 g4465 MEHVSKKRKLEHEGPAPTAQIDQLQGLTNLASDRYGARILFATDDFFSAAEGMLQHSDPVFIPDKYTEFGKWMDGWETRRKRVEGHDWCIVKLGLPGRIRGVLLDTCFFTGNQAPRASIQAACLDEEPVINRPSDKMGTRASESELAEAARIQSDQWEEIMPFTPLGPGYEATRFNVFAINSDKRWTHVRLNIYPDGGVARMRLFGDVAIDWAPIKEQLQVVDLAAVENGGQAVYCSDAHYGKPSNLIGPGRAPNMGDGWETARKKNRPPVYETGADGCLNLPGCDWSVLRLGHKGVLSKIEVDTNHFKGNFPESFILEGCLLEGDGPYDKDYFVGDHAAGGTHAQWVPIIARTKLNAHEQRYFSSADGQVLSHLSINHVKLTIIPDGGVSRLRLWGRPVE* # ORIGINAL: g3902.t1 original gene structure, not modified by PASA NODE_717_length_18707_cov_38.1695 AUGUSTUS gene 16690 18707 . + . ID=g3902;Name=g3902.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS mRNA 16690 18707 . + . ID=g3902.t1;Parent=g3902;Name=g3902.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 16690 18707 . + . ID=g3902.t1.exon1;Parent=g3902.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 16690 18707 . + 0 ID=cds.g3902.t1;Parent=g3902.t1 #PROT g3902.t1 g3902 MQANSKVAMPPPSLQVGDGWQTDGRTNRCDILLKIGGGYPQAVSFAALEVATASATHCSLFELTKYRPNASHADPPSLDAALSAVMDFTSGQSATSARTVLPRTEILSVYEHKEVFSQLASAKLADAALGEETDNPNSIAAAAAPPTTSVVTDKLSTKAKVLAINFPVPFAFGAIGFSYFILRLSCSWEPGHPLGMNSLRFLSSPSQPKPTQNVAQPHSASSPTPLLSQNGLTQQQLAAAIFAAAEDGFKRARLFQKELETLVGTGASGLLSPEGAQLLDQFTVSSSTVGQAPSLLSSTPNPYAAYNDLSGHVALDTANKVYTPSTHTTLAAASTSPAVNDHPAHNNSAIQATPTYNVNGGSTLAPNSVPINPYSTYVPASYGQTKTSVASSVVGPSPPAAALDDDHTDVESDSDMPSTGVPRKGPAAPPNDDHTDVEDEDDNVNTPTPRGAVAAATTPTAPLVPGGNPYVNIVPQRGQATPPPKAAPAPQPQNNVYNPLPHQQQQPQVGAPHPYFTIPPLNNPAVNPNAAYTTGTYNPHTHSVPPTTPPPVQVYNPHTYAPHSVAAPNSPATTVAAAPATVYNPHAQAPHAAQAPTATGKPLAGVVFILSGYVNPQRSKLRDDAVALGAVCKNDWDPATCTHLVTVGSNTPKYNQVVMHAVRPHTVYIVNE # ORIGINAL: g3900.t1 original gene structure, not modified by PASA NODE_717_length_18707_cov_38.1695 AUGUSTUS gene 9752 12673 . + . ID=g3900;Name=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS mRNA 9752 12673 . + . ID=g3900.t1;Parent=g3900;Name=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 9752 9820 . + . ID=g3900.t1.exon1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 9752 9820 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 10221 10354 . + . ID=g3900.t1.exon2;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 10221 10354 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 10445 10623 . + . ID=g3900.t1.exon3;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 10445 10623 . + 1 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 10743 10819 . + . ID=g3900.t1.exon4;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 10743 10819 . + 2 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 11025 11147 . + . ID=g3900.t1.exon5;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 11025 11147 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 11399 11524 . + . ID=g3900.t1.exon6;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 11399 11524 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 11826 12180 . + . ID=g3900.t1.exon7;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 11826 12180 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 12350 12387 . + . ID=g3900.t1.exon8;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 12350 12387 . + 2 ID=cds.g3900.t1;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 12560 12673 . + . ID=g3900.t1.exon9;Parent=g3900.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 12560 12673 . + 0 ID=cds.g3900.t1;Parent=g3900.t1 #PROT g3900.t1 g3900 MRSVANHRLEPSTGSGAAMAESTRASPTDHHKDDPFACSSTVGNIPYDATEERLKEIFSEVGPIVNFRLVFDRDTGKPKGYGFCEYRDVETAMSAMRNLNKYDLGGRVLRVDFAESDKPPVFGDERKGPGDKWGDRPTDRAPDGRMDSGRPQQLGPAVPSVLGVPLPPGMGAAEAVATTMSGMGLQQIYPFMQQMKSLVQTNPEQARQLLSQNPQLSFALLQALLLLGMIDAPIVQQLLQTAGLGLPPPPGMPHAPGHVHPSGMAPAPHQLHGQGPPLGPPMHPMGHLTARPHLPLGAPPSQQMPLGLQGAPPAMGVSHPQGLGIGIGLPAQPIPVAAQPMPPGMQPMGVGSFAGMQHQPGDLDEQRQLLMRLMSLTQPEIDALPPAQRAAVMQLRDQVARNSA* # ORIGINAL: g3901.t1 original gene structure, not modified by PASA NODE_717_length_18707_cov_38.1695 AUGUSTUS gene 13108 16324 . + . ID=g3901;Name=g3901.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS mRNA 13108 16324 . + . ID=g3901.t1;Parent=g3901;Name=g3901.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 13108 13156 . + . ID=g3901.t1.exon1;Parent=g3901.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 13108 13156 . + 0 ID=cds.g3901.t1;Parent=g3901.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 14163 16324 . + . ID=g3901.t1.exon2;Parent=g3901.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 14163 16324 . + 2 ID=cds.g3901.t1;Parent=g3901.t1 #PROT g3901.t1 g3901 MSVTLPKTSASTAPLAVKNHHEHQLKGTEGKERVTTRGNSFNFDNTLNANHSFNAGEPRSERHSLGPLGVPIAVTVSDAAAPPLDSDGNSNTARPCDSPCFEDFKGDENILANASIRPGSAIAGHRPASTAPSHVGGNRFDDEDRSSVFGDNKKGKQSSSPTKAQGSPGRRKATSASPQRQRGGAGVSPARSVPAAHAANVSTSSTANGPNSSAGGASTTAFTRGTTIDGQTSKHSTATTGKFFDPEATAAVAAIIPLSPTHAATAVGPSPAEMAAYSPHKRSTSKSNQRMFHDPRMGETVTSPMRLANPTALTIDEKKGKIERERTERYEHFLEVREREELVRGDKEQARHIEAQATLNKSPMRFKSPMKLSAEEKDTSIRREVAFRELLVQQAREEQRKTRRDMVEELKEIEAASHEVTQPPMRFGDTWTSPADEHSIQQESQRRAMERQTALTDDGPSFQRTTTSSRVNESTTLETRKQLGNIMLTEEEYNEIQKEEERKARKKASNQNFMTSYASRGLSSTNNQPPGTYPPNFSRFTKAQKSRLVQEPPPPPKRRLLPGGHVKVSERLLQSTTAAAGKKNDIVAYLESIQVKHNSWSSSPTPSSRVASISAAPGYPAEGYSALDHSHNHHPIIPLSTEPYCPPPNFEDAAESSVATMSTNIDSITKQKRSTPRTTAAMERRAEVNRAKVERMKREEEQAEKKRLAPKKDGTLLSFERLQSSLSGVGGSMRFT* # PASA_UPDATE: g3899.t1, single gene model update, valid-1, status:[pasa:asmbl_9025,status:12], valid-1 NODE_717_length_18707_cov_38.1695 . gene 4912 9641 . - . ID=g3899;Name=g3899.t1 NODE_717_length_18707_cov_38.1695 . mRNA 4912 9641 . - . ID=g3899.t1;Parent=g3899;Name=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 9496 9641 . - . ID=g3899.t1.exon1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 9496 9641 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 8564 9362 . - . ID=g3899.t1.exon2;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 8564 9362 . - 1 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 8210 8404 . - . ID=g3899.t1.exon3;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 8210 8404 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 7797 8108 . - . ID=g3899.t1.exon4;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 7797 8108 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 7083 7692 . - . ID=g3899.t1.exon5;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 7083 7692 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 6551 6858 . - . ID=g3899.t1.exon6;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 6551 6858 . - 2 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 5815 6441 . - . ID=g3899.t1.exon7;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 5815 6441 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 5419 5602 . - . ID=g3899.t1.exon8;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 5419 5602 . - 0 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . exon 4912 5265 . - . ID=g3899.t1.exon9;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . CDS 4961 5265 . - 2 ID=cds.g3899.t1;Parent=g3899.t1 NODE_717_length_18707_cov_38.1695 . three_prime_UTR 4912 4960 . - . ID=g3899.t1.utr3p1;Parent=g3899.t1 #PROT g3899.t1 g3899 MSAAVKMPLPEDLPFKMGREELEDGYMRLREENRTLKTVSRDQEDKMRRMATKLLRLTADLKRRDGDSGHPKGGVTMKDLRADEQVDEFRQQIGELTRQNQQLKNRLELAKAQAATSVARKRPGLRPSAAPTPQAVPGGQAGATPPASTASAPRIAALESSNAQYKAAVASLRDQLDHQRSDFEGQLRERLTKQRNDFDVELRVQLSRQRAEFDAELQALTEGLSGAQQHDIELIRLQRDLKDKTSRMHTLTDRYAATEAELEGLRESHAQLMDTCDRLGEELRGERVVRATLEAHAKYQKQSEKSTVELNEIIKDLRAEKALLEQENERLGRSAFDDSRERAHKEAESKLRHRIAALEATIRADLADKQAVLDRLEQEKIVSERLRVEKKELTISHLELKQQHEGLVDKVRFMTRESAIDLDEVEEALSIVRARKDRAASKLPFLQAVDERAADPARELEELRASHAVVLQELENTRRLLSIQVNIVKNYKEEREEAAALLQRTIADYERRLSEHVRLLDTRAARIKKLEAQLKDVAYGTRQYIVPREGDADDDSLAGIDINDDGADTISTVELERGQNLFEIHVGRVAMSLVSLQSLGIVNSGSEAGAMASFVTYDFFEFETQTTPVVVGLAPDFNFTSQYVVEVDDFFLHHLQREPMRFDLHMAYGADYRTVATCEVGVNTIAVYDPSATVGTVDYWVRMCLPMDQALRLFKERTKALGYVGRHTDIHDTRGGLAGSPSARLLYVSVLQCRGLRARRNDMQPAPYVVYKVYDHPDHDTVIVRNSNDPVFDDVQSFSLSHTDDVEHWLRHETIDMYVFDDSDPQKDYYLGMTSLVLAPLADGGEVSGEFALAGPDGRINGSVTVSLSWQHSPGFVPASVASRRVEKPVPVSAKALPIPKGGQLISESPEPRPLAAIEAGGRLARPRHDDEVSVGTDVAIKDDDDERFGVTDDEQSVSSFAGGHAIGSESEAAEFESISEVSGPTGRTKIPIPGPRVTSASVYVGIDRLEFDPRSPVAADKSVRQVFVDYHFLDFPSDGTLETISCAVRTGGMVFGYYQELRLNETRLRMLGSALIDSSDEAGTVTFTVVSEPPEDDESGDCCDIGHAIVSLHDLLRSQRDYDGPTALLSANGQDRIGTLWITFTAHGALNAATEVYSNQ* # ORIGINAL: g3898.t1 original gene structure, not modified by PASA NODE_717_length_18707_cov_38.1695 AUGUSTUS gene 339 2807 . - . ID=g3898;Name=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS mRNA 339 2807 . - . ID=g3898.t1;Parent=g3898;Name=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 2520 2807 . - . ID=g3898.t1.exon1;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 2520 2807 . - 0 ID=cds.g3898.t1;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 1601 2391 . - . ID=g3898.t1.exon2;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 1601 2391 . - 0 ID=cds.g3898.t1;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 920 1496 . - . ID=g3898.t1.exon3;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 920 1496 . - 1 ID=cds.g3898.t1;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS exon 339 809 . - . ID=g3898.t1.exon4;Parent=g3898.t1 NODE_717_length_18707_cov_38.1695 AUGUSTUS CDS 339 809 . - 0 ID=cds.g3898.t1;Parent=g3898.t1 #PROT g3898.t1 g3898 MPPYLANLVPIVEKYADWYGKAQLYVGSLEEQRKHFGIPHLRAPLPLGMTAQGRPAFNPLFLPPFGDVALDLALLIKAQARLQFCSPQTYSGSLVRKELAVFVGDVARGVRGVEERALDLVRLYIASFAVWTLAVQQKVSPANADERRKLWLLCLENGWGQMGVTAAFESLVAWWMNPGDEVVKDYYRQVFDELRAFADECGEPLLVAFDEIGATAGIAPGVWIHLDDYKHHRQNADDVAERRLQEASGEFHECGGGDAQPADLLYALRLLMLGLSDRGILTAFAETDYSLAILRDIGRRSPINGRLKPIKTFSAATDERMRDVLSYYFGIDPPAGALELFRGRPAFFARNLLGGLFATSHAIYTNFVGSLQCAAVFTPPDGQSSKSHIALDSKEADYFRSTNLLFVAGDACVYDITTEPLVVDVLRALVYETEPENDLVMRRLTASLPSNKGHLFEDIIAWTLVRRARQCRAGQPSNHPILLSAVLEPFLPPRFMFPLALSDVTVCINKVINLVGGDPFETAAEDPYGLCCRVSNLAHADIVFGVDIDGKKNYTKAIRDKTTSLSFATTSRAAFEATLKRHSSLEACWIRCVATVKPPNAKLAELVARHNMTATVREAIVLLNSTEAALGTAAHGELLRLCPDGRTHASQQSRLVKLFNDAWTKDVKSWTVDEVNKKVTRRLQSRKMATSEDRMERLSISNKGDNDE* # ORIGINAL: g11321.t1 original gene structure, not modified by PASA NODE_1484_length_11008_cov_41.0702 AUGUSTUS gene 6406 11008 . - . ID=g11321;Name=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS mRNA 6406 11008 . - . ID=g11321.t1;Parent=g11321;Name=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS exon 7833 11008 . - . ID=g11321.t1.exon1;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS CDS 7833 11008 . - 1 ID=cds.g11321.t1;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS exon 7195 7361 . - . ID=g11321.t1.exon2;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS CDS 7195 7361 . - 2 ID=cds.g11321.t1;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS exon 6745 6792 . - . ID=g11321.t1.exon3;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS CDS 6745 6792 . - 0 ID=cds.g11321.t1;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS exon 6406 6567 . - . ID=g11321.t1.exon4;Parent=g11321.t1 NODE_1484_length_11008_cov_41.0702 AUGUSTUS CDS 6406 6567 . - 0 ID=cds.g11321.t1;Parent=g11321.t1 #PROT g11321.t1 g11321 TVTVDKNWWPAGLAFPAWSGFSACTGAVPTFQCASSTNIVAEVPKVVSLSVPTQSDTTIPPKFASVSISVSIALVNPRLNVDRNLANNAASVTTPVVSQATLDVRFSNANQMNPYLVSDPSATTIPFGQSLLELYPVQITNTNPTGIAFGIRAMIRLPLGMSYAQNSNLTFPALFFNAGTYKRTTLNATIAGSSILTISLDALQPNTGFVVSGIRFNVDRVLAKNGDFSKIPFTVDALQSSLTTAAPSFTLAAPLVASDNVPASLAATLTNVIATAVAGQVVTFVSSITNSGQGSATAITVSLTYEKRLQFISVAGFYLVCTAAVAVDATRMKTTCARSPTLDPLESGSAQFTFKVDDAALAATGATASTAVSLVGTYKDINGDATFTATTLNQNIQAQVDLRLSSIVLLATSAVVPGATVVARITVANMGPSTLAANGVRVTLVYPKDALTPTNASWSSTGMGASFVIPQQFPARTGLVLDFPFTINAGLDWARTSLAFSASAAPTNGAVVTAAGALNSMDTTIAVDFRHNIGFAVRSDSLERRINQIVISRLRLRNYGPNPTYADPSRTCTLKVTLSTTKGSVSVDADSFKTCTAVNGNSVYNCPVPVIPVGGSFVLALGYYFTAASNGSFVGEVSCTNLPGGGSSDVDPSTDDNLVRYDVSVIEYGTIFVAIAPITPASIIRTTFPVLMRVLNTAAGDGLPAAKGITVTVGYPSDLCDFNFTGTNAVTGNPPLATISLKSPGTITITVTSLDAAPSDASSIQVRLFFVLHPDVRSQQDVSISATVDSVTPNTNPRKVFVKTMKTGENAIASSISVRTDPPEAVRANNVPMRLPNGTFTASMVTPGNFTATFTLRNLDFSFPAAVAANMTVLLSFGTKDYVPYLSMDNYMQSLSQRANSTLTAEYNSYAADTDKFNTMAAAQFASFFNRSNVKVVAPAGSTCTRVTQLQFRCGVPALGVDSTAVYVVVMDAITYPRVAGARVTLNATVSVTDGAIFTVGSQQVATGIDIRSAIVYDGNGLCACSNCSLCEPGQYGPLCAPCPPCNQGICLDGSTGSGACKCNTNWANVVLANGTTIPCSDCKPGMYGVTCSGVCPTCSNGGTCNQGKSGDGKLARRATQSAGSVMTERPAMDSAHATLDTLVLSATCARLLATALRASVGVVDRGLSDVECVMISSSKACS* # PASA_UPDATE: g14490.t1, single gene model update, valid-1, status:[pasa:asmbl_6406,status:12], valid-1 NODE_3687_length_2957_cov_36.2113 . gene 429 2872 . + . ID=g14490;Name=g14490.t1 NODE_3687_length_2957_cov_36.2113 . mRNA 429 2872 . + . ID=g14490.t1;Parent=g14490;Name=g14490.t1 NODE_3687_length_2957_cov_36.2113 . five_prime_UTR 429 691 . + . ID=g14490.t1.utr5p1;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . exon 429 1822 . + . ID=g14490.t1.exon1;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . CDS 692 1822 . + 0 ID=cds.g14490.t1;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . exon 2044 2183 . + . ID=g14490.t1.exon2;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . CDS 2044 2183 . + 0 ID=cds.g14490.t1;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . exon 2398 2510 . + . ID=g14490.t1.exon3;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . CDS 2398 2510 . + 1 ID=cds.g14490.t1;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . exon 2661 2872 . + . ID=g14490.t1.exon4;Parent=g14490.t1 NODE_3687_length_2957_cov_36.2113 . CDS 2661 2872 . + 2 ID=cds.g14490.t1;Parent=g14490.t1 #PROT g14490.t1 g14490 MTSAIANQLLGYTNTQASKGFLSLIRAIGEAKSKYEEDRIIVGEIALLKERIGLPDVTPRQMREYLVRLVYCDMLGHDASFGYIHAVKYAQSTALSDKKVGYLAVCLLLHEDHELMILLINTLQRDLKSNNMLEVCAALTAVCRLANAEMVPALLPLVESRLTDQREAVRKKAVLALQRMHSKAPTIVSGISEQLRRALCDKDPSVMGASLNAFHELAILNPSTYRDVTPSFVTILKQIIDHRLSREYEYHGVPAPWMQIKLLKILAVLGADDPRTSEKMYEILAETLRRAEGGSHVGYAVVYECIQTITTIYPSPPLIEMGARTLDRFLRSTNNNLKYLGITALAAIVQVEPRHAAQHQLVVIDCLDDPDETLKRKTLDLLYRMTNPSNVNVIVDRMVSFMRATPDAYIRADLFDRVNRLAERFAPDNIWFLETMVCVLEIAGEVASADVAYNLLRLIAEGSDNENADAELKARAVEVCAGLVARTTMPDVLVKVMVWVLGEYGIYSGIISPDGLVDALCEWLDKPFICG* # PASA_UPDATE: g12343.t1, single gene model update, valid-1, status:[pasa:asmbl_7403,status:12], valid-1 NODE_4519_length_1511_cov_37.4004 . gene 142 1215 . - . ID=g12343;Name=g12343.t1 NODE_4519_length_1511_cov_37.4004 . mRNA 142 1215 . - . ID=g12343.t1;Parent=g12343;Name=g12343.t1 NODE_4519_length_1511_cov_37.4004 . five_prime_UTR 1162 1215 . - . ID=g12343.t1.utr5p1;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . exon 1082 1215 . - . ID=g12343.t1.exon1;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . CDS 1082 1161 . - 0 ID=cds.g12343.t1;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . exon 784 880 . - . ID=g12343.t1.exon2;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . CDS 784 880 . - 1 ID=cds.g12343.t1;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . exon 465 612 . - . ID=g12343.t1.exon3;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . CDS 465 612 . - 0 ID=cds.g12343.t1;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . exon 142 267 . - . ID=g12343.t1.exon4;Parent=g12343.t1 NODE_4519_length_1511_cov_37.4004 . CDS 142 267 . - 2 ID=cds.g12343.t1;Parent=g12343.t1;3_prime_partial=true #PROT g12343.t1 g12343 MATELTIGSQHCIPTLNYGETCATLGSPYIGKCNYDGAGTALTHIYGNLTAPVAAPSANLISFSQSDFSTASSLDKEGYLYVPTACQQNATCRLHIAFHGCEQGHASVGMDFVQNAGYNGWAEANNIVVLYPQVVPTSILGSNPKGCFDW # PASA_UPDATE: g1574.t1, single gene model update, valid-1, status:[pasa:asmbl_4662,status:12], valid-1 NODE_2617_length_5647_cov_51.0651 . gene 4221 5647 . - . ID=g1574;Name=g1574.t1 NODE_2617_length_5647_cov_51.0651 . mRNA 4221 5647 . - . ID=g1574.t1;Parent=g1574;Name=g1574.t1 NODE_2617_length_5647_cov_51.0651 . exon 5431 5647 . - . ID=g1574.t1.exon1;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . CDS 5431 5647 . - 0 ID=cds.g1574.t1;Parent=g1574.t1;5_prime_partial=true NODE_2617_length_5647_cov_51.0651 . exon 5152 5261 . - . ID=g1574.t1.exon2;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . CDS 5152 5261 . - 2 ID=cds.g1574.t1;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . exon 4854 4979 . - . ID=g1574.t1.exon3;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . CDS 4854 4979 . - 0 ID=cds.g1574.t1;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . exon 4523 4609 . - . ID=g1574.t1.exon4;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . CDS 4523 4609 . - 0 ID=cds.g1574.t1;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . exon 4221 4382 . - . ID=g1574.t1.exon5;Parent=g1574.t1 NODE_2617_length_5647_cov_51.0651 . CDS 4221 4382 . - 0 ID=cds.g1574.t1;Parent=g1574.t1 #PROT g1574.t1 g1574 PPPPSPTPKQADILAALPRLLILPPNVLRESFNRLLEPKEGQTSAVSPSELLIALHMLDPVKDKLTWPAIIEGTNQCFARQNVYTQEVLAVVLQQLVDVNPLPFLFMRTVMRALDICPKLAGFVMSILSRLITKQVWKQPKLWEGFVKCCEKTRPISFGVLLQLPGKQLESCFSIAPDLKPALVTYAQALRAEQLAVVERSTLSLLGLFQPAGQAAVPLDVRMDDAPGEVEDA* # PASA_UPDATE: g1573.t1, single gene model update, valid-1, status:[pasa:asmbl_4661,status:12], valid-1 NODE_2617_length_5647_cov_51.0651 . gene 405 3531 . - . ID=g1573;Name=g1573.t1 NODE_2617_length_5647_cov_51.0651 . mRNA 405 3531 . - . ID=g1573.t1;Parent=g1573;Name=g1573.t1 NODE_2617_length_5647_cov_51.0651 . five_prime_UTR 3495 3531 . - . ID=g1573.t1.utr5p1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . exon 3314 3531 . - . ID=g1573.t1.exon1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . CDS 3314 3494 . - 0 ID=cds.g1573.t1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . exon 2900 3117 . - . ID=g1573.t1.exon2;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . CDS 2900 3117 . - 2 ID=cds.g1573.t1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . exon 1150 2716 . - . ID=g1573.t1.exon3;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . CDS 1150 2716 . - 0 ID=cds.g1573.t1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . exon 657 757 . - . ID=g1573.t1.exon4;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . CDS 657 757 . - 2 ID=cds.g1573.t1;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . exon 405 507 . - . ID=g1573.t1.exon5;Parent=g1573.t1 NODE_2617_length_5647_cov_51.0651 . CDS 405 507 . - 0 ID=cds.g1573.t1;Parent=g1573.t1;3_prime_partial=true #PROT g1573.t1 g1573 MRAFGAIGAGVLVLCMVAALAGGVNADANNACDATWGAGFGDWERAFGAWKNDVCAVCAGVDLIGGECTGRSAFVEPSEGQKTSIFDHLTPAELLSVRAFVLDSARSGLNVEAEPTILRSNRINLIELELPKKKEAVAYLDTATARRPERRAKVVLYMGAESEPFVGFYSVGPIVDGVVAAEASAVLVSRAEWNQRSPDSIEYAGIEEVIVAEMHKLAPLTLYTYDAVYDSADCPSDVTANNGSCLGLQWTDTGPRGSDLTQRSTWLFFMLDGEGFYLMAAGLEFFVEHTSMDTADYSLKKVFFRGRSFPSTEALLAEWNADATYRAKLDFDLARDPKWSSLRRRGNGRAFEDLKAPKQQQLDGARYTISGQTVDWMDWRIHVGNNFEAGVRLMDVSFKGERIAYEMSFTEAAASYASGFSPSQGNTFYLDSAWGLGSAMYELLPGLDCPEHASFLDLYFVEEGTLVRRRHAVCIFEEDLAKPSIKHFDNDFDGSYVFVGGVRATRLVIRMSVSVYNYDYNVNWFFEYDGSINFQNSASGYMQAGFWSDDERNYGTRIQNQVMGQLHDHFIGLKLDLDIFGGTDNSFEVTRVKTEMREIPHLDQTREQKVFDRSYLKSEDESRIKMSLDAPAKFTFVNPSKRNKWGEIPGYKIIPETMARSILSAENPLVRGCSWIRDNIGVTVHKDSEPRNSHGYNQAVLAVPYLSYDSFFDGEDLEHADLV # PASA_UPDATE: g567.t1, single gene model update, valid-1, status:[pasa:asmbl_6578,status:12], valid-1 NODE_3803_length_2721_cov_37.8485 . gene 2 1264 . + . ID=g567;Name=g567.t1 NODE_3803_length_2721_cov_37.8485 . mRNA 2 1264 . + . ID=g567.t1;Parent=g567;Name=g567.t1 NODE_3803_length_2721_cov_37.8485 . exon 2 1264 . + . ID=g567.t1.exon1;Parent=g567.t1 NODE_3803_length_2721_cov_37.8485 . CDS 2 1228 . + 0 ID=cds.g567.t1;Parent=g567.t1;5_prime_partial=true NODE_3803_length_2721_cov_37.8485 . three_prime_UTR 1229 1264 . + . ID=g567.t1.utr3p1;Parent=g567.t1 #PROT g567.t1 g567 GTKLFADAKKVFHESATHVHATRRKCKTARGTPTTDYLNGLRAYYNENSDVGISTRSSKTFKVEDDRRIVEMIKEGKGWTDIGREFGKNGKAIFNRCAHSLDPRLHFGPFTAEEDAAIHAHVREHGEGKWTELWTKMGHTRSARVLRSRYTFTLQPDVKKGPWSDDERRRLLEGIVKHARDWVAVAGHVGTGRNPNHCQCAARHAFGGFDFVSAVRYKRFTPDEDARLRIAVERYGRNWDKVAEDVPGRSANLMVRYRKIIPQWMRVSYSPDVRASVRALLRGDGDVEGKLAAQFKDIDAAKGWVALELGMDDVSQVDWARVNGASGAERSAALDAVVKEIVPRVTAEEWKEGASAVWVPAWRWERPICAGRRAPIAAVANHPRIQGFIAVSAGGDHRSSARDDEVVR* # PASA_UPDATE: g568.t1, single gene model update, valid-1, status:[pasa:asmbl_6579,status:12], valid-1 NODE_3803_length_2721_cov_37.8485 . gene 1835 2292 . - . ID=g568;Name=g568.t1 NODE_3803_length_2721_cov_37.8485 . mRNA 1835 2292 . - . ID=g568.t1;Parent=g568;Name=g568.t1 NODE_3803_length_2721_cov_37.8485 . five_prime_UTR 2276 2292 . - . ID=g568.t1.utr5p1;Parent=g568.t1 NODE_3803_length_2721_cov_37.8485 . exon 1835 2292 . - . ID=g568.t1.exon1;Parent=g568.t1 NODE_3803_length_2721_cov_37.8485 . CDS 2018 2275 . - 0 ID=cds.g568.t1;Parent=g568.t1 NODE_3803_length_2721_cov_37.8485 . three_prime_UTR 1835 2017 . - . ID=g568.t1.utr3p1;Parent=g568.t1 #PROT g568.t1 g568 MSGPDQPGMVAALSEHLAGFDASIRDLDTDTSSAPFAGYQIFSLKAIVALPTHVSSKELRHKMQELESDLGVDISIESVDAGKHK* # ORIGINAL: g13144.t1 original gene structure, not modified by PASA NODE_912_length_15939_cov_58.4482 AUGUSTUS gene 12880 15854 . + . ID=g13144;Name=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS mRNA 12880 15854 . + . ID=g13144.t1;Parent=g13144;Name=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 12880 12915 . + . ID=g13144.t1.exon1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 12880 12915 . + 0 ID=cds.g13144.t1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 13031 13097 . + . ID=g13144.t1.exon2;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 13031 13097 . + 0 ID=cds.g13144.t1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 13243 14831 . + . ID=g13144.t1.exon3;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 13243 14831 . + 2 ID=cds.g13144.t1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 15017 15097 . + . ID=g13144.t1.exon4;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 15017 15097 . + 0 ID=cds.g13144.t1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 15307 15412 . + . ID=g13144.t1.exon5;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 15307 15412 . + 0 ID=cds.g13144.t1;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 15673 15854 . + . ID=g13144.t1.exon6;Parent=g13144.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 15673 15854 . + 2 ID=cds.g13144.t1;Parent=g13144.t1 #PROT g13144.t1 g13144 MSLTADDFNRLQEQLIELKASKYEAEQQAKHARAELDQLRQQHGIAAPSAASAAAAAAAAAAQQQSQAAQKAAKFFQAGKDLFNRNKPPTGAPSATAGAPSAALGQDASRSSLDLMRVDPSQVQALVEENEQLKRNLQAAFDESKMQNSALRESMGQMDKERDRVAKELDDIRNENRAMAASLAEARTQVAHVTAAKAALEKRIEILTSENDEGVDDVDADVVMAGHASGATDTLISFDDDVNSSTVESSAAAVRTPSSALKERLRAAINELHNLRATGIPTDVQVAVDACKEELRLTSDRVRALEADNAALRDQVKSAHLAAPSWAPTPAPAAAPAPATVPHVDAQAAPAAAKRTSIDVTATKEREELKKRADSLKTDYDSLSKEYEKAKASVADLTKRRDELERKLKDSEAAAAKVKHDADASAARVIELQRALDEANKTSDKRKNLLDELSIQKQELIAKQQQQQLQSERTFAAKAEEFSAKAASYEERLRQADDRINLLQRDLDKSRAALEEVKADKAAVEARLDDQRAACAALEKQCADDKEAARVALEAVTQERDGAKAQIDGMRQEVEDTRSERALAEKKGLQLMKDLKRQLQVEKAKSERLQMEINQMNGYRPSSGTPDDIPSRSSMDLESSNSSRRTSVDLPRTSIDGRQMNSLIDDNKTLIKRCTELQSEKASLAEK # PASA_UPDATE: g13142.t1, single gene model update, valid-1, status:[pasa:asmbl_9969,status:12], valid-1 NODE_912_length_15939_cov_58.4482 . gene 1773 10790 . - . ID=g13142;Name=g13142.t1 NODE_912_length_15939_cov_58.4482 . mRNA 1773 10790 . - . ID=g13142.t1;Parent=g13142;Name=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 10671 10790 . - . ID=g13142.t1.exon1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 10671 10790 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 9753 10529 . - . ID=g13142.t1.exon2;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 9753 10529 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 8920 9621 . - . ID=g13142.t1.exon3;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 8920 9621 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 4315 8544 . - . ID=g13142.t1.exon4;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 4315 8544 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 3934 4116 . - . ID=g13142.t1.exon5;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 3934 4116 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 3604 3812 . - . ID=g13142.t1.exon6;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 3604 3812 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 3351 3459 . - . ID=g13142.t1.exon7;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 3351 3459 . - 1 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 3082 3213 . - . ID=g13142.t1.exon8;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 3082 3213 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 2835 2948 . - . ID=g13142.t1.exon9;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 2835 2948 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . exon 1773 2713 . - . ID=g13142.t1.exon10;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . CDS 1952 2713 . - 0 ID=cds.g13142.t1;Parent=g13142.t1 NODE_912_length_15939_cov_58.4482 . three_prime_UTR 1773 1951 . - . ID=g13142.t1.utr3p1;Parent=g13142.t1 #PROT g13142.t1 g13142 MESMGKTMTECLSAIAAEYSDGLRRMERLSVVLEDLSDHLADENGTILICPYDGTLPQKRQAALREAVRVSDMQTYMRWGIHHRRSLRSLHDFFRRMQWMALRNPDLADPVLPPPGSGLAQGVGNSGGTPSDSEYLTPTSSRVYSQPTDEGTRAAFLTEMDPAGAGAGGEPDSGTPAPKSGGDDRDIPATGAAAASEAAFKHAVFALTGGEIVDACPVYMSEFEAIRPRIHYLGRLFKLEINFNDFGSQIELFYFVTRRFGNVFRQQTLDRSYPVYDTAINVSRSVSHADITTGTTHLKEATWLSACTLREDLDAEHELGRSWIKQGHSRETDELLKAHAALLANDDQSYVQLRLREHAENALRLPDLHPTAAAGEPRVAPGAPDVSDALWRAVYADAAIAPPSTGATLPPAAAASLGRVRIENSGTEKIEKDPLLGLVFLSYMRTRDLQQKVRDSLNYMRSLERTLAIDYAGGYARSVTKQKNGGSKSQRIGGESIIVGDDRAGEPEAHPGVHSDAPSDFAATAQAVMQMAEIENRDDYYTVEDGRVRVKDSRGVYVMYDVTLKDFASIETELLAIATHYIERAGALSKEAAREAALSQSMSQSLGASVGAALFESGLGKSKTHSKDKSSAAGELDIAAYSRQRIDRSALLLDAWGFEYEFHAEKMRLIDSYMQIYDNTFDVAERKRIAHIVYNLIRYRPCFDPTAPYFASVYAIETDILRSHRELIVEAANRMIDSERVAIRRAHDNADAMDRQQGAREGVERHALGRQGLPDNFPAQFQIKLRPNRTGIKNEYLMEFHPCLASLSRLPSLLSTVSAEFARMRAPASTTDRLVLTRRVAVVVLAEYRLLPIAPLVANAPPPSHFLHNALLTSTAGPTLHSKTSLASNSRESFERSAAEGGDSGSSTPVAAKTGPALKAPSSRTRAGVNQPAVVAGTPQERMRNIHASLLPEDPLAATLAAGRAAEAYVATISGRDYSAGGIEEFGEHLEDAEDLSAPRIRTWMLALELLEQRQRLLDALDETDILERVYKEDARAMGHASRRVGLCSIEYESPGSCLTEKLRELEREGQTAQPKPNLMGGGDYAERPPDLAVCEIDEELGNGFDFSSLDGLQRQICDVGVERLRLALAAQVAHKNALIATALFHAECVSVYSASNTVRTTGGSGSGLLGESMPAGGPAITVSGVDPSASLNASGMGFALRDADVSRRLAKSFVSVRSRKLEARNQVYMWFAREYKRGCAISGGEDAFPESTDAFMRSRRAGLVARFTQTLVADIGRFSMRVQLNRHLRCIKTLLKRFPLRDAHFGFSPEDPEMFVAHPPLADRGQSNHSVAPVVGQGGASSVPSSAQPTTAAIDSADDESKFFRGLSRVSRRPLQLLTDDGTHVVNPWYLPSQREALEMFDQELPAGQTAALAPSIEIVSSMHDVFAFLYTHARFSLAGTEPVIPMHAAEGIAAELQRIMTQIDKLPDPASPADVVGFLARLREVYLVEFELALRYRIPETFLAGDHVSAVQILARNFGRGTFEIFRAGSCESAYATYAGRPVLEDRMGGSVCVRQMFPHRHFASRAGPLPGCMLPWHLTHRNLELTLLHLTDHDKSYAHGEVLGVRLQMEDYLQEHGIAATDQPLESIALARRFLVSFLRLEKLKRFWAADCLGLESVDTWQAYADYAKGFQQLLASAQKYYGLDSPEAFAEAQRGDGSRANRSGPSDAAGGVGEASTDLPPKTPGGGMGSPNPQLPGLRSTSKDFFVGGGKAAAVLGEAGARLYSLRVLRDALECHMIRKTRASVARAHALLLTEMARSTARDFGADTEDSETQADILHCALARLSLIATVPPESRRESTDSRHPVAGTEHLGKRAMVAICDVEDVFRQLGTELLRHESRRMRTLEDGWQRRVNHAGHVLYLREQEILALQRAAGNEEANRRLLARTQLAGDALELVMEVTALRAKVKELSESQRSYEAKVREGLRKDYEDLVNSLAAVTFAIKSHFHEYRCALYEDIIEAVADVRKDTLERMIRSSTRRTEGEKEAEVARVFEQEDTMTETIQENTGLWSIVLKMKVMQEFKGMGLRASYEKRLRNLQSEVLQTKRRLLDEQMESKQSLRSLTQQNNALLKQLGACEVRLLHSEEQTQLAQKELQSLSAWRAARAKELQALEQRAKRSDKFRNVNVDELLRDLEEKDSLLKELSDAEARQVRQTQFDSTKAGKIIKHLEKNLRHETEMKRQAFETIDRLQGQMERLQSECDAAEAANSGYMMRGRGDMNGFGSSGSLDGPVSRRPGSSLEAHQRALENAAYSINGSYGNIVARLGAHSRASSPRADSPQSGRRSPHDRDSPPGEPTAGPSASSALRLMWQLEGAGASQAMSRPGRPITAPSQRQAPASGNVPPLPSPRRPQSGSAPLAQGTVRPGTSVTRIGSAGTGSRDGKTASGPFAPGRLTLAGRDS* # ORIGINAL: g13143.t1 original gene structure, not modified by PASA NODE_912_length_15939_cov_58.4482 AUGUSTUS gene 10942 12070 . - . ID=g13143;Name=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS mRNA 10942 12070 . - . ID=g13143.t1;Parent=g13143;Name=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 11909 12070 . - . ID=g13143.t1.exon1;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 11909 12070 . - 0 ID=cds.g13143.t1;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 11572 11663 . - . ID=g13143.t1.exon2;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 11572 11663 . - 0 ID=cds.g13143.t1;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 11315 11420 . - . ID=g13143.t1.exon3;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 11315 11420 . - 1 ID=cds.g13143.t1;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS exon 10942 11079 . - . ID=g13143.t1.exon4;Parent=g13143.t1 NODE_912_length_15939_cov_58.4482 AUGUSTUS CDS 10942 11079 . - 0 ID=cds.g13143.t1;Parent=g13143.t1 #PROT g13143.t1 g13143 MAAVPKPFRPSLLIGPNPFESPVATANTNNGAGFPLDPHEPSAKNRGLQAQLEKDLAELKEARLATIPSASGTSVPLFTSVPEPMDARHFSRQRETILGRVMHVPPPEPVLIHGNMLKEEVDLAMHPILTYANLPVVMYDFFRRRTEECVQKKYLHLLRWARYGK* # ORIGINAL: g2905.t1 original gene structure, not modified by PASA NODE_6795_length_509_cov_69.6106_potentialcontaminant AUGUSTUS gene 71 509 . - . ID=g2905;Name=g2905.t1 NODE_6795_length_509_cov_69.6106_potentialcontaminant AUGUSTUS mRNA 71 509 . - . ID=g2905.t1;Parent=g2905;Name=g2905.t1 NODE_6795_length_509_cov_69.6106_potentialcontaminant AUGUSTUS exon 71 509 . - . ID=g2905.t1.exon1;Parent=g2905.t1 NODE_6795_length_509_cov_69.6106_potentialcontaminant AUGUSTUS CDS 71 509 . - 1 ID=cds.g2905.t1;Parent=g2905.t1 #PROT g2905.t1 g2905 TLPIVKTSGYSVTSPRNDVDSVLQSLFVNGPLAISVDASKWNNYESGIFNGCDYANNITMDHAVQLVGYGTDAALGSDYWIVRNSWSASFGELGFIRVVRESTPKCGWDNKWRTDGGGCNSDPDTVWACGQCGILYDTVFPQVVV* # ORIGINAL: g3107.t1 original gene structure, not modified by PASA NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS gene 101 508 . - . ID=g3107;Name=g3107.t1 NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS mRNA 101 508 . - . ID=g3107.t1;Parent=g3107;Name=g3107.t1 NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS exon 417 508 . - . ID=g3107.t1.exon1;Parent=g3107.t1 NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS CDS 417 508 . - 0 ID=cds.g3107.t1;Parent=g3107.t1 NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS exon 101 238 . - . ID=g3107.t1.exon2;Parent=g3107.t1 NODE_4714_length_1301_cov_24.0677_potentialcontaminant AUGUSTUS CDS 101 238 . - 1 ID=cds.g3107.t1;Parent=g3107.t1 #PROT g3107.t1 g3107 MVETILDPLFASILSAMESVLLKMHSEDFARHKPAHSSRDEPDAPCSAYMSDLIALVSHIQQEILARIDCEGVVAP # ORIGINAL: g2865.t1 original gene structure, not modified by PASA NODE_23682_length_81_cov_70.3333_potentialcontaminant AUGUSTUS gene 1 81 . - . ID=g2865;Name=g2865.t1 NODE_23682_length_81_cov_70.3333_potentialcontaminant AUGUSTUS mRNA 1 81 . - . ID=g2865.t1;Parent=g2865;Name=g2865.t1 NODE_23682_length_81_cov_70.3333_potentialcontaminant AUGUSTUS exon 1 81 . - . ID=g2865.t1.exon1;Parent=g2865.t1 NODE_23682_length_81_cov_70.3333_potentialcontaminant AUGUSTUS CDS 1 81 . - 0 ID=cds.g2865.t1;Parent=g2865.t1 #PROT g2865.t1 g2865 EKEKEKEKEKEKEKEKEKEKEKEKEKE # PASA_UPDATE: g6720.t1, single gene model update, valid-1, status:[pasa:asmbl_5728,status:3], valid-1 NODE_320_length_27038_cov_47.4928 . gene 9851 12079 . - . ID=g6720;Name=g6720.t1 NODE_320_length_27038_cov_47.4928 . mRNA 9851 12079 . - . ID=g6720.t1;Parent=g6720;Name=g6720.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 12028 12079 . - . ID=g6720.t1.utr5p1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 11979 12079 . - . ID=g6720.t1.exon1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 11979 12027 . - 0 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 11273 11884 . - . ID=g6720.t1.exon2;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 11273 11884 . - 2 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 11074 11163 . - . ID=g6720.t1.exon3;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 11074 11163 . - 2 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 10858 10990 . - . ID=g6720.t1.exon4;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 10858 10990 . - 2 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 10608 10711 . - . ID=g6720.t1.exon5;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 10608 10711 . - 1 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . exon 9851 10513 . - . ID=g6720.t1.exon6;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . CDS 9930 10513 . - 2 ID=cds.g6720.t1;Parent=g6720.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 9851 9929 . - . ID=g6720.t1.utr3p1;Parent=g6720.t1 #PROT g6720.t1 g6720 MSAANRSAEEEIARLAALINRHRQQQGVHPPRATGLVTGEALNSNPSQSAVVLRAPVVRPGAPHARGGANYLYANSGRGAIRPANVWRPGQPGAVPHLSTAIHVRPGASMTWRAPHVSAPASTAVSEAVPKQIMAVTPTIRLDSSVASGAPPISGSIPPSKTARPILVKSPAAHRATLEFRKSGVGKGSLGKKLMPNVDGTVLLKGVAYKKTGRSILIAKDGNRPQFVVIHGVKYVIDPGRRALKRAPGEAERLALQARESRSTPAGDTPPVPAPTLRPSSQAMVPAAGLKSHLSRDLKKTIKNARASFRVKFGGVAKEKQYCMFFNKFGVCKKKDACPFIHDPTKVAICRHFLKGSCEKTDGSCPLRHVVDPDKMPVCAFFLRGVCTNDQCPYSHVKVSSSAAICEDFVKGHCPMGDKCLKRHALECPQFAASGMCKDGDACRLPHARPGDAWRKRPRDDAQMAVDASNATTLARVTPSAPENMVAPPAFRRYVRPNIAIFSGSEHAELGSSDDDNETPLFM* # ORIGINAL: g6725.t1 original gene structure, not modified by PASA NODE_320_length_27038_cov_47.4928 AUGUSTUS gene 25019 27006 . - . ID=g6725;Name=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS mRNA 25019 27006 . - . ID=g6725.t1;Parent=g6725;Name=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 26656 27006 . - . ID=g6725.t1.exon1;Parent=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 26656 27006 . - 0 ID=cds.g6725.t1;Parent=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 26432 26550 . - . ID=g6725.t1.exon2;Parent=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 26432 26550 . - 0 ID=cds.g6725.t1;Parent=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 25019 26261 . - . ID=g6725.t1.exon3;Parent=g6725.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 25019 26261 . - 1 ID=cds.g6725.t1;Parent=g6725.t1 #PROT g6725.t1 g6725 MQRMDYGAGLESNSRRRQRPTHRAQSHLRNAQSNTSDNNGQTAGTNTPAHATGAGPRVASSAVGSGARHSAHQQGPAWWRGAAGRMRAVARALGRAARAALLPAGMPLNNPALSKWQVAFAFLLPWAQRLFIFVLVLFTIALVSNLYAENSTSPDTWLYWKPFRGAFVFSSVVLGMVQLLAIGVIVANNAMRSDNRSLLHPPLLRRNFLSILTFLWFEWTVINITSLCIALSTVGLPWFGYSTFKVGFAVTFVSLLVQYGLFVYQYVRRRPMLSWTLRDCYFVVLPITIVLLGSGILFLVTVMRFDVGPQIRNYLATCIVLGIFTLVAPPIILHRYVLRMARLAALHAASTADGAVREEASAVANHIRGRCRELGVRKSALQSLMLVGMELDGLEGLAGCASLRRLYLSNNRIASCRGLESLTCLETIHLDDNALSDWVALVPLRSLQRLRRASVERNPILGCDPDAHLRLIALLPRCTSLNGLTVTDDARTSALALHGAWLAGVLAKHRAETFRLQTRPPVVLAGLVAGQLGWQDHPVFTRGSKCVVARDGDDATLFGSLASFGRNSVQ* # PASA_UPDATE: g6717.t1, single gene model update, valid-1, status:[pasa:asmbl_5720,status:12], valid-1 NODE_320_length_27038_cov_47.4928 . gene 1 5793 . + . ID=g6717;Name=g6717.t1 NODE_320_length_27038_cov_47.4928 . mRNA 1 5793 . + . ID=g6717.t1;Parent=g6717;Name=g6717.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 1 2 . + . ID=g6717.t1.utr5p1;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . exon 1 4614 . + . ID=g6717.t1.exon1;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . CDS 3 4614 . + 0 ID=cds.g6717.t1;Parent=g6717.t1;5_prime_partial=true NODE_320_length_27038_cov_47.4928 . exon 4730 4796 . + . ID=g6717.t1.exon2;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . CDS 4730 4796 . + 2 ID=cds.g6717.t1;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . exon 4896 5793 . + . ID=g6717.t1.exon3;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . CDS 4896 5523 . + 1 ID=cds.g6717.t1;Parent=g6717.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 5524 5793 . + . ID=g6717.t1.utr3p1;Parent=g6717.t1 #PROT g6717.t1 g6717 STGAGSKVVLRVVRERGSFFEQTVSWTSSGNAGQYTPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVQIQESDNPYGFVTFGKSVLYVCTEGSLLRVPVNRTGGVIGNASVDVIVEFGSASEEDLGAVPGRIVFGNGVTSQILEIGVFADNLPELSETLTLRLVNPVGFSIASGDDKAPVTILANDSPYGNFSVSQVIRMVSEDSGSAMVTITRVGGALGAVVIPVKTVLGNATEGQDYVGVQQDVLFTVGQLTADVNIVIADDDIPESDESFTVQIGVPRLVDQTQEIVPGSPALGSLAVATVVIIANDDFGGVFAFSATSLTVAADEINGPNIATLSVVRMRGAFGAATVSWRIVDFDAANLGEGEGSLSFADGETSKVINVTILPDDIPEMDQVFTIQLVSIAGSGASIGAESRSTLVVKANDDPAGVFAFGRASITVDHSVGALQLVITRSGGSFGEVVLDYSASEIDSLGPDEKAVAGADFEAVVASASFAPGQTNVTIQIVILAQNEAEFSEKFVVRITGVRLAVASAVPIDPRIGADSASVVTIAEHGNPSGVVEFVTADLTSEEGSGPVTVTLQRTIGTRGSVTVTVLVSTKSTATDVVDFSISTRTVVFADRISTASIILDIVDDSDPELDEVVALELVNATNFLTIGARRTLSVLIPQNDDPNGVVGFIGTAASVTVPEPVEGSTDVVLTVTRGRGTFGDVSIGWRLTDAGIDLSTSTDIAPSSGVVLLPSGVSNGTIVLSILADDVPELERRFVIALVTISGGSRLGELTAIEIVVPENDNLRGVFSFETANIVAPEAFKSRIVARIVRTESTFGTVDVSLQARQISDVPAVQSATPAVDFTFGNKSLLVAPDTIVIRFGPGVSSGFVNVNIVDDRFPEMDEQFELWILNVTVVSTDGNVVVTNPSFGFGQVRQMKAVIPANDNAFGVISVNVSSSVSEGSAVQLVVGRLPSMGAFGRVTGVVQAYSGTAVAALDFEPFNLTFVIEDGSYDAVSAQFQILDDDIIELTESFRVGVRITSTTYGDSVIDASSGATASKDAIVSIPFRTTTAFTCPAEFFSGANWPQTTPGDIVTVACGAGFVGTQSRACGPADPTWQKVDSSGCTSILDRLRNLRDSNITADSVADANAAVLEIAKQASSLDASSVSSTLDVVDHMLSYFLENVNVADSSEAVEFVNVLGSLLDVNPSDLSAESSARLASNIESIAAALANGLDEDGKKTIDAGNLVVAGAAVNAQTTNSLSFPFTSNGDGRRRRSDSDVVDFTIPAAAFAEAANQTLGDGETISVHFIVYKKPTTYNSVDPVTLGTSIISASFADAPADGVHFSDSYVEYILTHNATVHPSCVFWNESKSTWSDYGCFVAETSPAGDWTRCRCNHTTSFAVLFGSSDNTALSIITYIGCGVSMFGAAVTFVTFIILRHLRSFAIKLLLNLMAAIFFTNLVFLAGINNSGNSGLCAATAIFLHFFILSQFTWMLTIAFNLFRGIVLLATDSNEYFLRMIAFAWGTPVAVVVLSMAIKFDMYGDDEKCWIVDRGALIGSFMVPIGIVIVANLVMFIMIVRALVIQAGERKLLQQKDNRSQFKICVGIFVLMGVTWIFGLIAVEDPTRVSEYLFVITNCFQGFFICVVYVASKRVLQAYREVLNSSFAAISSAFSRSTASTVGGRSSGGTSSGAAGGVSSAATDSTSSGVFTSTASGAQSLSRASGAAYVSQVDPEEICARVLSMGPGDNLGESRV* # PASA_UPDATE: g6719.t1, single gene model update, valid-1, status:[pasa:asmbl_5727,status:3], valid-1 NODE_320_length_27038_cov_47.4928 . gene 5920 9697 . - . ID=g6719;Name=g6719.t1 NODE_320_length_27038_cov_47.4928 . mRNA 5920 9697 . - . ID=g6719.t1;Parent=g6719;Name=g6719.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 9647 9697 . - . ID=g6719.t1.utr5p1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 9574 9697 . - . ID=g6719.t1.exon1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 9574 9646 . - 0 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 9444 9470 . - . ID=g6719.t1.exon2;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 9444 9470 . - 2 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 9218 9276 . - . ID=g6719.t1.exon3;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 9218 9276 . - 2 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 9002 9107 . - . ID=g6719.t1.exon4;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 9002 9107 . - 0 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 8728 8851 . - . ID=g6719.t1.exon5;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 8728 8851 . - 2 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 7033 8501 . - . ID=g6719.t1.exon6;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 7033 8501 . - 1 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . exon 5920 6889 . - . ID=g6719.t1.exon7;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . CDS 6495 6889 . - 2 ID=cds.g6719.t1;Parent=g6719.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 5920 6494 . - . ID=g6719.t1.utr3p1;Parent=g6719.t1 #PROT g6719.t1 g6719 MQMPSLHNSVPPVANGVAGLLRVQVVEATHLPKARRLVSVLLGTILVPATLAYCAKAWTDGVFGWAHLLLTAAAFVCAYQFFITKRLIGLLTGGLVWNNAFVVVSVGATTFKTRVARNGPHPEWNERFAVIVRDAERSFDVKCTVYGMKALAKNKPLGSCSVSLENIVSTSAAREIEDDKGTLVLRRISRIIEDVALLGSDDEDDDHAPPSAPGGLVRGDSTGDSKGHEDGGASGAMEMSANDEEASDDCAGGDATRDLWLTLDAAGQKSTTRASDDERDFVPQLHLRVEFVPSHEVLRRFWKRMVAQFDTDDNGKINRIEFGALVEALGVEISEADMDAAYGGESGDRELAPDAVYRLISEQCDWAPGVPVQCPVCSVPLSFAGDDRMGAVSHVALCSEGSSDGPGQILTGGLLTEAYASRGWLSRIGNYLSGGRYGIGAVSGNILVQDRLTGAIVEEKMPVFIRVAIRLMYHTNMGDSTVRNSRVQRIMARLTEQQGTKFDNPSSVSHIRPFIKFHNLDTDEMADTLDSFKTFNEFFYRKLKPGARQLADPDPHVAISPADSRCVVFQTVDDATRVWIKGKHFSVEALVGGPKLAAPFRGGSVAIFRLAPQDYHRFHMPVDGIVGHTLNIPGKYYTVNPMAVRQNVDVFTENKRTVTFIDSDVFGRVAYVCIGAMMVGSVILTSKRGARVSRIDEHGHFAFGGSTVVILFPADKICFDRDLLKNSAEGLETLVRVGMSIGRTPSSSSG* # ORIGINAL: g6723.t1 original gene structure, not modified by PASA NODE_320_length_27038_cov_47.4928 AUGUSTUS gene 21719 23386 . - . ID=g6723;Name=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS mRNA 21719 23386 . - . ID=g6723.t1;Parent=g6723;Name=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 23338 23386 . - . ID=g6723.t1.exon1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 23338 23386 . - 0 ID=cds.g6723.t1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 22800 22932 . - . ID=g6723.t1.exon2;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 22800 22932 . - 2 ID=cds.g6723.t1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 22537 22667 . - . ID=g6723.t1.exon3;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 22537 22667 . - 1 ID=cds.g6723.t1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 22186 22349 . - . ID=g6723.t1.exon4;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 22186 22349 . - 2 ID=cds.g6723.t1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 21937 22005 . - . ID=g6723.t1.exon5;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 21937 22005 . - 0 ID=cds.g6723.t1;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 21719 21823 . - . ID=g6723.t1.exon6;Parent=g6723.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 21719 21823 . - 0 ID=cds.g6723.t1;Parent=g6723.t1 #PROT g6723.t1 g6723 MAGYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLNDARQHSNSNMVIMLIGNKSDLESRRAVSKEEGEAFAKEHSLIFMETSAKTAANVEEAFIGTAKQIYDKIQQGVFDISNESNGIKVGPQHAGTGGAGGAGGGAGAAPGAGGACC* # PASA_UPDATE: g6724.t1, single gene model update, valid-1, status:[pasa:asmbl_5726,status:12], valid-1 NODE_320_length_27038_cov_47.4928 . gene 23901 24895 . + . ID=g6724;Name=g6724.t1 NODE_320_length_27038_cov_47.4928 . mRNA 23901 24895 . + . ID=g6724.t1;Parent=g6724;Name=g6724.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 23901 24003 . + . ID=g6724.t1.utr5p1;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . exon 23901 24258 . + . ID=g6724.t1.exon1;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . CDS 24004 24258 . + 0 ID=cds.g6724.t1;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . exon 24354 24500 . + . ID=g6724.t1.exon2;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . CDS 24354 24500 . + 0 ID=cds.g6724.t1;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . exon 24627 24895 . + . ID=g6724.t1.exon3;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . CDS 24627 24752 . + 0 ID=cds.g6724.t1;Parent=g6724.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 24753 24895 . + . ID=g6724.t1.utr3p1;Parent=g6724.t1 #PROT g6724.t1 g6724 MRLEESMQPDTARGGGASGVRAGALGWPVGVGIPLTRAVAAGIAASLASVAGKGAAVVAGGGARHVTGAILSLDLLSGAGLTEHTVENALALVLVLTVFGMNAIMWTTFVRALAASKSSLPVTVTCSVANFVMSAVFGHALFGELLAPTWLVGAACITVGLALIHRDAVDQSHTD* # PASA_UPDATE: g6722.t1, single gene model update, valid-1, status:[pasa:asmbl_5725,status:3], valid-1 NODE_320_length_27038_cov_47.4928 . gene 16883 21959 . + . ID=g6722;Name=g6722.t1 NODE_320_length_27038_cov_47.4928 . mRNA 16883 21959 . + . ID=g6722.t1;Parent=g6722;Name=g6722.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 16883 16912 . + . ID=g6722.t1.utr5p1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 16883 17020 . + . ID=g6722.t1.exon1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 16913 17020 . + 0 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 17305 17481 . + . ID=g6722.t1.exon2;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 17305 17481 . + 0 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 17655 17744 . + . ID=g6722.t1.exon3;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 17655 17744 . + 0 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 17833 18260 . + . ID=g6722.t1.exon4;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 17833 18260 . + 0 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 18482 18693 . + . ID=g6722.t1.exon5;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 18482 18693 . + 1 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 18859 18957 . + . ID=g6722.t1.exon6;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 18859 18957 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 19071 19126 . + . ID=g6722.t1.exon7;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 19071 19126 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 19264 19648 . + . ID=g6722.t1.exon8;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 19264 19648 . + 0 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 19758 19997 . + . ID=g6722.t1.exon9;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 19758 19997 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 20227 20332 . + . ID=g6722.t1.exon10;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 20227 20332 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 20449 20537 . + . ID=g6722.t1.exon11;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 20449 20537 . + 1 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 20690 20747 . + . ID=g6722.t1.exon12;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 20690 20747 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 20871 20974 . + . ID=g6722.t1.exon13;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 20871 20974 . + 1 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 21094 21234 . + . ID=g6722.t1.exon14;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 21094 21234 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . exon 21379 21959 . + . ID=g6722.t1.exon15;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . CDS 21379 21515 . + 2 ID=cds.g6722.t1;Parent=g6722.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 21516 21959 . + . ID=g6722.t1.utr3p1;Parent=g6722.t1 #PROT g6722.t1 g6722 MSHYTAHQARCYWQVFERYAEGHPRRLSLSALQELMPLFGPELTKEQAKALIYKYDSACEGLLIFDDFLELLADYEVTLKHGRDIAFAAFEHLARKAGAVDGISKSQFAHALEVGSGLDQDDIDAIADQFFPANGELMTSADFFVRLEDTPLAWRRPIDPSEVGPTNGRLVIGVCAVTNLEQLGRPKARRGRGALEYATLDPLVAVRLAGISKETAAIVGTLSPEWNQPVTFPIHYPSLADLAPVEALIAKERIEFHLFDHVTMGTSPHLQWLGCGSIPLATALSATGSPMSILLEITSPTPLPNGNPVLEVSVSLKAESEGALPDYSIIDHLRCPEELWNSTDNDKLETDIGQSFTVVQAEASRLDGDRDRPSMQPQIILDSASGFNGKSSVWQHMVEFLGDYRASFARRSIRLIGLDEHGAFRPLPCFLRPLSSPLFKGIETLDGLAANVARISTAASDITASGDNLPPFLWLDTDHTASPATVLARHWGSPLEHALLLCSLFMGRGITAFVAFGHGATGQTQVWVVTLLYSGRRPGASLRSRSALVDKATPASVAETAESFAPERFVHRGLRAEEERRRTGGKGEPTVLFWEATTGRSFIPGEHPAFERIGCLVNERNILVNVQQSDQTARTAWDTSRPELWHPVLTDEILDAVGPPVPCYSVPSAILLDARSESLESQKTLLEGLVAAIQGYRRHYLYIPATPMHRHVSKLLSDFLDDLEASRPVDATPRVIDSLPDHCLWHGVPFQFKTKDVGRILQQLAFSGILDCSVPDTSYAIAVKVFPYPWGLSSVWVYVGYLCDLNKTL* # ORIGINAL: g6718.t1 original gene structure, not modified by PASA NODE_320_length_27038_cov_47.4928 AUGUSTUS gene 5907 6353 . + . ID=g6718;Name=g6718.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS mRNA 5907 6353 . + . ID=g6718.t1;Parent=g6718;Name=g6718.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS exon 5907 6353 . + . ID=g6718.t1.exon1;Parent=g6718.t1 NODE_320_length_27038_cov_47.4928 AUGUSTUS CDS 5907 6353 . + 0 ID=cds.g6718.t1;Parent=g6718.t1 #PROT g6718.t1 g6718 MHAIQATKLDRIMSVPIQHTGGCHCGSVRFSVRAPADLLVVDCNCSVCSMKRNAHFIVPQEDFVLLAGADCLTEYRFNTRVAVHLFCKICGVQAFYRPRSNQDGMAVTVHCLDPGTVRSITQTTFDGRNWESEMAARQDIAALSKKSE* # PASA_UPDATE: g6721.t1, single gene model update, valid-1, status:[pasa:asmbl_5722,status:12],[pasa:asmbl_5723,status:12], valid-1 NODE_320_length_27038_cov_47.4928 . gene 12606 16830 . + . ID=g6721;Name=g6721.t1 NODE_320_length_27038_cov_47.4928 . mRNA 12606 16830 . + . ID=g6721.t1;Parent=g6721;Name=g6721.t1 NODE_320_length_27038_cov_47.4928 . five_prime_UTR 12606 12793 . + . ID=g6721.t1.utr5p1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 12606 12812 . + . ID=g6721.t1.exon1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 12794 12812 . + 0 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 13018 13221 . + . ID=g6721.t1.exon2;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 13018 13221 . + 2 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 13324 13415 . + . ID=g6721.t1.exon3;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 13324 13415 . + 2 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 13610 13693 . + . ID=g6721.t1.exon4;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 13610 13693 . + 0 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 13896 14170 . + . ID=g6721.t1.exon5;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 13896 14170 . + 0 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 14336 14429 . + . ID=g6721.t1.exon6;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 14336 14429 . + 1 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 14541 14744 . + . ID=g6721.t1.exon7;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 14541 14744 . + 0 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 14924 14985 . + . ID=g6721.t1.exon8;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 14924 14985 . + 0 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 15184 15284 . + . ID=g6721.t1.exon9;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 15184 15284 . + 1 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 15417 16058 . + . ID=g6721.t1.exon10;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 15417 16058 . + 2 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 16185 16580 . + . ID=g6721.t1.exon11;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 16185 16580 . + 2 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . exon 16687 16830 . + . ID=g6721.t1.exon12;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . CDS 16687 16721 . + 2 ID=cds.g6721.t1;Parent=g6721.t1 NODE_320_length_27038_cov_47.4928 . three_prime_UTR 16722 16830 . + . ID=g6721.t1.utr3p1;Parent=g6721.t1 #PROT g6721.t1 g6721 MDATAAAAHRDGRAGGPPVYRRLPSDDMRARIASGTAEGLHVDELLDAFVVFYDEIRQFGVRNKKKPIQDFLQRYESRVNRLRDTRVQLSDFEFIKLIGRGSFAEIYLGKAKDSGQAYVIKRMSKSELLSRSESVCFRDELDFLVAAANAETGSGATRRAAGITALHYAFYDDEYIYLVMDFYPGGDLLGLLGKHDNFPEDMARFYLAEAVLAIETVHRLGYVHRDIKIDNLLLDAKGHVHLADFGSCAKLNKDGTVESIISGGTPDYISPEVLAGMQGERNVVYGADCDWWSLGVVMYEMLVGETPFYADSVIDIYRNIKNHKRSLNFPEEIELSNEATDLITRLCTGQTTRLGRKGAEEIKQHPFFQSIDWTKLRKARAPFIPELASATDTAFFEDFEYEGDDIATALSADKQPLLRRQSTVGSSDQAFGTPLSFLGYWYVHSDESDRPSSRKTASASSDTKALVDGHQHQHHSAGAGVGAGVGAGVGAAQVHRRGLGDERAREAAAVASTSAGASHPSEPLSRTVAPVASGASAGGSGKESEPPLAGNGRGTAPPVASGTVPPAANEQKGDLNRAASSSGSLSVKPSTEEPAAPKASRGKYRVRFPPSVVFFDAVRSGEIELVEKMLGDGTAKLSDVTDRGQNALHVAAQSGSLGVAEYVIKHGLPVSSSDESGNTPLHLAVAEEDLEMALLLVTNGAAGDATNDCDETPIDMTNDEEVIQAVEGYLERRRR* # ORIGINAL: g8478.t1 original gene structure, not modified by PASA NODE_1542_length_10583_cov_39.2993 AUGUSTUS gene 4404 10361 . - . ID=g8478;Name=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS mRNA 4404 10361 . - . ID=g8478.t1;Parent=g8478;Name=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS exon 6981 10361 . - . ID=g8478.t1.exon1;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS CDS 6981 10361 . - 0 ID=cds.g8478.t1;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS exon 6176 6420 . - . ID=g8478.t1.exon2;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS CDS 6176 6420 . - 0 ID=cds.g8478.t1;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS exon 5846 5889 . - . ID=g8478.t1.exon3;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS CDS 5846 5889 . - 1 ID=cds.g8478.t1;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS exon 5524 5669 . - . ID=g8478.t1.exon4;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS CDS 5524 5669 . - 2 ID=cds.g8478.t1;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS exon 4404 5069 . - . ID=g8478.t1.exon5;Parent=g8478.t1 NODE_1542_length_10583_cov_39.2993 AUGUSTUS CDS 4404 5069 . - 0 ID=cds.g8478.t1;Parent=g8478.t1 #PROT g8478.t1 g8478 MLLARCSSATDSPSNAVYSFVGTVRSILHTDFPINRSTIVSGPGPLHSVTYLPEERDLRFTLRATERFVWSNSTSDLLPLLLDSTYGVNASAGIDSVTVDGNGIVMSCDAGSHPATFTIAGGGDFSLTLANFTLMDCRFGYGEVADDIPSLLRVSENAFVGIVGANFMGLRNLRLIFLEGTARLQDVSLVDSFAKINSTLCGDRFEDTCDGGLVLRVLGSGLALVDRIVVSQVSCTGGCSGGFGAVNEFGCILISNSTLTMIDATDGGILDVTGSGLVAVVSTSVSKVSARNGGLLFLRQSAFAVLNGVSVNNSIAAEKGGLASLDGVAQLFATELHIDNSQAQTGGVVHISGGASASMRHILVRNATALGTGGVAFLSGVAHLELASMQANLCVAQDGGFFGMTDRSSVDFDLVDARSVSAIAAGGFVYARDGVVFRANRVNITEAIAVDGGVMAIFNEAAAFIDTAVVLGVSAQEGASFAKIGNSASLSATRLNIVGASAGNYGGAFIIASNGQATVANSSFVAIAARYSGGLAFLDNSAMLTLVGVRIDGVVSGAYGGVVTLFNNAMLSMDLCDITAVSSRLTGGFADVNNNATLVVTRSNLTDTYTEMTGGAIAAFDSSHVFASKFIVSNSTAPEAGGFLIASNDAQVWMDGLILYHARSEDGGAFALMHESLVDLTGSELFNCSASNRGGVTYVSGLSTFEATGTAVQNASAMHGGVLFADHSSTLLLSSFFVLRGVAFDSGGCIFAAETSSVRIDGARFDRCAAGVDLLSAGVGGVAYIDVTSKIAIVARVVVASPSAVLGPGFFSEKEIGAASRALVTVEGAIAPSGIERLLPGWESGGIFAGVPASIVASSSQFDPTTKSLTVVSGGVLPAFKLTLLDDYGNPISTHVRRPLALSLTITPLTQTTSPLTNGTAGPALRGDIEHSFGPSASVNFDALYLYALPGTYTLGVVSPNMFLYGIYDSNKRGRDLPETFGLNVTVSDCAPGFNLDNNDGLWECTQIPSSSDATPVALIVAPAVVAGALFLACLFGFFRWRSSVRMLQRSRATHEEFIAQHASKQTHLAMAELMRDSLEIIKPIGEGEFGRVFLGRLCVDNGRPRMVAVKQLKEGASFEQRCDFLEEATVMRDLFHPHVVSLCGIIIVDEPMSILLEFVPHGDLLSFVRSVPSTRRNIGSPAVRMLETFGLHIASGMAYLAQMRVVHRDLAARNCMVGQDAFGEYLVKVADFGLSGVTSDKNYYRKSGNKKEKLPLKWMAPEAILEHKWTEASDCWAYGVTMWEMFSFGQVPYADIPTAGVFRHIRKGNRLERPRSCAEEYYIAIIAPCFLESPEHRPSFSSLAERIIPDVLAARKGAAVGVEEIDRRTPVMGRKSVFGVVDGSGGGRTLQVPQHKMSPRGPAGIGNTGPQDSPKFPRGSYLHLQDVVCAQGDHTYARCTPPPSRHVKESAVATNTVEIIDDVGSVGDGNVKDTHIAMVRFAPSSETNEITV* # PASA_UPDATE: g8476.t1, single gene model update, valid-1, status:[pasa:asmbl_1918,status:12], valid-1 NODE_1542_length_10583_cov_39.2993 . gene 143 838 . + . ID=g8476;Name=g8476.t1 NODE_1542_length_10583_cov_39.2993 . mRNA 143 838 . + . ID=g8476.t1;Parent=g8476;Name=g8476.t1 NODE_1542_length_10583_cov_39.2993 . five_prime_UTR 143 143 . + . ID=g8476.t1.utr5p1;Parent=g8476.t1 NODE_1542_length_10583_cov_39.2993 . exon 143 362 . + . ID=g8476.t1.exon1;Parent=g8476.t1 NODE_1542_length_10583_cov_39.2993 . CDS 144 362 . + 0 ID=cds.g8476.t1;Parent=g8476.t1;5_prime_partial=true NODE_1542_length_10583_cov_39.2993 . exon 669 838 . + . ID=g8476.t1.exon2;Parent=g8476.t1 NODE_1542_length_10583_cov_39.2993 . CDS 669 782 . + 0 ID=cds.g8476.t1;Parent=g8476.t1 NODE_1542_length_10583_cov_39.2993 . three_prime_UTR 783 838 . + . ID=g8476.t1.utr3p1;Parent=g8476.t1 #PROT g8476.t1 g8476 DSDIHLECCLTSSVCTCAVTSGWHCHPVIRFSRDNANFSLSTDDPAICNITYRDDLAIAVSKVGLDASAITRTVFDAARSCFLPQAEKEALIAELLQVYLPRKLEVTFAM* # PASA_UPDATE: g8477.t1, single gene model update, valid-1, status:[pasa:asmbl_1919,status:12], valid-1 NODE_1542_length_10583_cov_39.2993 . gene 1043 4127 . - . ID=g8477;Name=g8477.t1 NODE_1542_length_10583_cov_39.2993 . mRNA 1043 4127 . - . ID=g8477.t1;Parent=g8477;Name=g8477.t1 NODE_1542_length_10583_cov_39.2993 . five_prime_UTR 3987 4127 . - . ID=g8477.t1.utr5p1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 3905 4127 . - . ID=g8477.t1.exon1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 3905 3986 . - 0 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 3502 3574 . - . ID=g8477.t1.exon2;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 3502 3574 . - 2 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 3221 3329 . - . ID=g8477.t1.exon3;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 3221 3329 . - 1 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 2559 2715 . - . ID=g8477.t1.exon4;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 2559 2715 . - 0 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 1925 2123 . - . ID=g8477.t1.exon5;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 1925 2123 . - 2 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 1482 1611 . - . ID=g8477.t1.exon6;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 1482 1611 . - 1 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . exon 1043 1168 . - . ID=g8477.t1.exon7;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . CDS 1088 1168 . - 0 ID=cds.g8477.t1;Parent=g8477.t1 NODE_1542_length_10583_cov_39.2993 . three_prime_UTR 1043 1087 . - . ID=g8477.t1.utr3p1;Parent=g8477.t1 #PROT g8477.t1 g8477 MPTLPQGDAPERSNGIAASDVLLPKKSANHASIHLIAKRNIADNANITGEERVDAIGRIRRVALDREGLETTDGLECLGPITHLFLQHNVISRIENIECFTHLRVLTLFNNNITRVENIRGLTSLQWLDLSNNAIVDFVSEEYPPSLVFLCLRGNPCSFGDGYRETVANALPQLKSLDDEPIEGRDDVDDEGDDDDDAEDAEDAQRRDIRERIAARVRNNEGVPDTGSDRRNVTDVSKDVRQRTRLRVKELQRERALRTGKIESRRRADDSDDSDD* # PASA_UPDATE: g11617.t1, single gene model update, valid-1, status:[pasa:asmbl_7264,status:12], valid-1 NODE_4382_length_1699_cov_36.8387 . gene 91 1657 . - . ID=g11617;Name=g11617.t1 NODE_4382_length_1699_cov_36.8387 . mRNA 91 1657 . - . ID=g11617.t1;Parent=g11617;Name=g11617.t1 NODE_4382_length_1699_cov_36.8387 . five_prime_UTR 1656 1657 . - . ID=g11617.t1.utr5p1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . exon 1522 1657 . - . ID=g11617.t1.exon1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . CDS 1522 1655 . - 0 ID=cds.g11617.t1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . exon 1181 1271 . - . ID=g11617.t1.exon2;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . CDS 1181 1271 . - 1 ID=cds.g11617.t1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . exon 744 902 . - . ID=g11617.t1.exon3;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . CDS 744 902 . - 0 ID=cds.g11617.t1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . exon 463 531 . - . ID=g11617.t1.exon4;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . CDS 463 531 . - 0 ID=cds.g11617.t1;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . exon 91 290 . - . ID=g11617.t1.exon5;Parent=g11617.t1 NODE_4382_length_1699_cov_36.8387 . CDS 91 290 . - 0 ID=cds.g11617.t1;Parent=g11617.t1;3_prime_partial=true #PROT g11617.t1 g11617 MYTEAYRIACLGVTETDWRCLAMESLEKFNFDVAKKSFVRIRDLRYLELIHSIEERKKRGEADNQVFLADVYAFQGRFADAAKIYKQTGNEAKAVEMYTDLRQFDAAKEYMTQSDVKEVQQLVKKQADWAKSTRDPSSAVDMYLAAGETLEAVDILGENVWMSRLIELSRTLNKADTKALSRAAHYFKLNDLHVNAAECYSRMGDFKSLMKLHVDMR # PASA_UPDATE: g8179.t1, single gene model update, valid-1, status:[pasa:asmbl_2592,status:12],[pasa:asmbl_2593,status:12], valid-1 NODE_1775_length_9306_cov_39.9091 . gene 3903 9268 . + . ID=g8179;Name=g8179.t1 NODE_1775_length_9306_cov_39.9091 . mRNA 3903 9268 . + . ID=g8179.t1;Parent=g8179;Name=g8179.t1 NODE_1775_length_9306_cov_39.9091 . five_prime_UTR 3903 3939 . + . ID=g8179.t1.utr5p1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 3903 4704 . + . ID=g8179.t1.exon1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 3940 4704 . + 0 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 4914 4985 . + . ID=g8179.t1.exon2;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 4914 4985 . + 0 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 5212 5489 . + . ID=g8179.t1.exon3;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 5212 5489 . + 0 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 5755 5907 . + . ID=g8179.t1.exon4;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 5755 5907 . + 1 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 6163 6238 . + . ID=g8179.t1.exon5;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 6163 6238 . + 1 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 6544 6602 . + . ID=g8179.t1.exon6;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 6544 6602 . + 0 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 7197 7346 . + . ID=g8179.t1.exon7;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 7197 7346 . + 1 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 7508 7554 . + . ID=g8179.t1.exon8;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 7508 7554 . + 1 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 7774 7815 . + . ID=g8179.t1.exon9;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 7774 7815 . + 2 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 8046 8951 . + . ID=g8179.t1.exon10;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 8046 8951 . + 2 ID=cds.g8179.t1;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . exon 9098 9268 . + . ID=g8179.t1.exon11;Parent=g8179.t1 NODE_1775_length_9306_cov_39.9091 . CDS 9098 9268 . + 2 ID=cds.g8179.t1;Parent=g8179.t1;3_prime_partial=true #PROT g8179.t1 g8179 MMSMIGFQHRVVAFAASLGVLLVLATLFAACGVSAAPRLVGGKGGFALRFNGNDQFFEFNDVTAIKENFTIEMMLFPCSTKDQQSFVSKDAPDGVLLTIAYFNGAHAIGWFSGSMQNIPPRADAHHLAWTGERVINAGVPSIRLRGHINGVMQTEGFAPLSGYTLTSSSADANGAKVNLKWYVGARNRRIRKGSLRDRPYCGVMDELRMWSSVRNETQLQSLMGTVIPDADLTAPAYTDLSGYWKFDEGDGIVAKNSMSSDGSTHGFLGGGSDDEKPSWVQSPFNLVGADVTTLIGESRSVPITLPALSVNGNVSVAAVTNITSIPVKGNIYVSDGAGNKASNTPITAFTVLPLSAKNTVIYEPNAGETGIKYAKFDYIVCPNGGGDCDPRAYKVLVDVRANNRPVAGRGYALQFDGEKDYCNFADFAVPDNFTLELWVRPDSARTGQAIIGKHSIIGKNQFLFGLYEYHLNYKDATFTGGIGNVWAYAHHLAVVHIGGDTSSNVTVYRNGDMLWTNIYPRNMRDSAGLAWNLGNDWDTSVSGPVTSDFFVGQMDEFRVWTRLRTPAEIKADMKRALVGNEQGLYLYYRMDELPGAKNLNSITATNFPAVPLSPFQANSLFDVPGSEVVYQIREGTNTTVTVERFDQDGDALVVTVTALPTVGTTYIVSSVGVLSTPPATPFTLGSTSKIMYVASSGVGSYVAKVVYYVHDGVLQSNDASVAFKVLIPAPRIVRVTATGAGNGFGDGNTIVLDFNLATSTPDVSTKAALDALLKFSSPIGSNYVGEWKTNAQLVISIVTTGNVTEPPIGAFNVSVVGTGLRNQAKTSVESKDEPVTGVIYLQGSWKKPAVISSSSSNAAAIGGGVGGGVGGFLLLCIIAVVLYRRSRDAAALNDMSWRIPHAEITK # ORIGINAL: g8178.t1 original gene structure, not modified by PASA NODE_1775_length_9306_cov_39.9091 AUGUSTUS gene 2499 3071 . - . ID=g8178;Name=g8178.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS mRNA 2499 3071 . - . ID=g8178.t1;Parent=g8178;Name=g8178.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS exon 2499 3071 . - . ID=g8178.t1.exon1;Parent=g8178.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS CDS 2499 3071 . - 0 ID=cds.g8178.t1;Parent=g8178.t1 #PROT g8178.t1 g8178 MSIERLPHIPPESMTDAQRHAVEQFRVLRGGRDPFGPFPAMLHSPVLMPLVAAVGEYCRHGNTLGHRATELVILLVARHYDQCVEWAIHAPVAANAGIPNSVIDAIAASTPLCADELSHDDFIVYDAASVLLHTKQLPDAQYKRVLDRFGEQGAVDLATTIGYYATLALIMNVAKTAPPSGPLLPTGTVS* # ORIGINAL: g8177.t1 original gene structure, not modified by PASA NODE_1775_length_9306_cov_39.9091 AUGUSTUS gene 187 881 . - . ID=g8177;Name=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS mRNA 187 881 . - . ID=g8177.t1;Parent=g8177;Name=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS exon 742 881 . - . ID=g8177.t1.exon1;Parent=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS CDS 742 881 . - 0 ID=cds.g8177.t1;Parent=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS exon 495 567 . - . ID=g8177.t1.exon2;Parent=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS CDS 495 567 . - 1 ID=cds.g8177.t1;Parent=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS exon 187 368 . - . ID=g8177.t1.exon3;Parent=g8177.t1 NODE_1775_length_9306_cov_39.9091 AUGUSTUS CDS 187 368 . - 0 ID=cds.g8177.t1;Parent=g8177.t1 #PROT g8177.t1 g8177 MSSGSASASHSSTSSTEDENVSVDDIEELPVNTNTALDPGPNIAMLRSEVDGRTRETLRSMNPYLGDQIIPAHDGGTVDEARAAVILQSTYRGLLARRKYVDLLFAKYESEEAARQRNEMRRLEEGEVLLE # PASA_UPDATE: g4976.t1, single gene model update, valid-1, status:[pasa:asmbl_4047,status:12], valid-1 NODE_2327_length_6719_cov_38.0086 . gene 109 3079 . + . ID=g4976;Name=g4976.t1 NODE_2327_length_6719_cov_38.0086 . mRNA 109 3079 . + . ID=g4976.t1;Parent=g4976;Name=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 109 256 . + . ID=g4976.t1.exon1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 109 256 . + 0 ID=cds.g4976.t1;Parent=g4976.t1;5_prime_partial=true NODE_2327_length_6719_cov_38.0086 . exon 679 791 . + . ID=g4976.t1.exon2;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 679 791 . + 2 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 1005 1145 . + . ID=g4976.t1.exon3;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 1005 1145 . + 0 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 1389 1575 . + . ID=g4976.t1.exon4;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 1389 1575 . + 0 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 1747 1853 . + . ID=g4976.t1.exon5;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 1747 1853 . + 2 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 2018 2116 . + . ID=g4976.t1.exon6;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 2018 2116 . + 0 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 2477 2638 . + . ID=g4976.t1.exon7;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 2477 2638 . + 0 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . exon 2787 3079 . + . ID=g4976.t1.exon8;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . CDS 2787 2921 . + 0 ID=cds.g4976.t1;Parent=g4976.t1 NODE_2327_length_6719_cov_38.0086 . three_prime_UTR 2922 3079 . + . ID=g4976.t1.utr3p1;Parent=g4976.t1 #PROT g4976.t1 g4976 VPEFTDFFVRSRNSIERWNAETEHRIVMSLLNSRTASEYAEVAAEEPLKLPPVQVWRDNRDFEVLDTLSKGTREASAEIKKYLFDRKTCLTRFRASILKSMLALAEGRAGDAAAARAEANDALSALPSVPQGERVPLSAAPASFFSLFAAEYSAVLLSAIDALACFHTDPLASSEAADTAAAGASVKVDALVTLLRGAVDGTSKSVLEHISAKTEGVLLLGEDVQRLSLTGEALTLVGSMVALVGSRLPPPKRQKKRQQADPHAEARVAFEGLVGKFGEVANSYEKLVKEIEGRLSAESRKRVLEDAFLKLTLSLNTDEDKSAFGAKVLDMVADAHALALRSLSGLVARKAAFVATCLSLSAQ* # ORIGINAL: g4977.t1 original gene structure, not modified by PASA NODE_2327_length_6719_cov_38.0086 AUGUSTUS gene 3453 6559 . + . ID=g4977;Name=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS mRNA 3453 6559 . + . ID=g4977.t1;Parent=g4977;Name=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 3453 3596 . + . ID=g4977.t1.exon1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 3453 3596 . + 0 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 3860 3960 . + . ID=g4977.t1.exon2;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 3860 3960 . + 0 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 4223 4325 . + . ID=g4977.t1.exon3;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 4223 4325 . + 1 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 4536 4668 . + . ID=g4977.t1.exon4;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 4536 4668 . + 0 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 4931 4985 . + . ID=g4977.t1.exon5;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 4931 4985 . + 2 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 5231 5413 . + . ID=g4977.t1.exon6;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 5231 5413 . + 1 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 5595 5857 . + . ID=g4977.t1.exon7;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 5595 5857 . + 1 ID=cds.g4977.t1;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS exon 6399 6559 . + . ID=g4977.t1.exon8;Parent=g4977.t1 NODE_2327_length_6719_cov_38.0086 AUGUSTUS CDS 6399 6559 . + 2 ID=cds.g4977.t1;Parent=g4977.t1 #PROT g4977.t1 g4977 MKAASTLKSSTKEARTRHAPLADQILGEGVRAKRRAPKQRDRADDPAGFVEERLTKKILKQARQQQEELEEDDGPKKGRRHLGSVPTLKSTGGDASSDEDEAEAFSDTEDNYFDDVEIDPEEERALEQFMSKNPMRRQTFGDIIMDRIRDKATELASQASEMPGPGAKLDPKVIQVYTSVGEILSRYRSGKLPKAFKIVPALTNWEEILYFTNPDGWSAAAVYQATRIFASCLNAKMAQRFFNLVVLPRIRDDIAEYKRLNFHLYMALKKSLFKPAAFFKGILLPLCESGDCTLREATIVASVIAKSTIPMLHSSAVLLKIAEMEYTGANSIFLRTFFDKKYSLPFRAVDGVVAHFIQFQSDTRVLPVLWHQALLTFVQR* # ORIGINAL: g8165.t1 original gene structure, not modified by PASA NODE_3950_length_2472_cov_31.171 AUGUSTUS gene 204 1988 . - . ID=g8165;Name=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS mRNA 204 1988 . - . ID=g8165.t1;Parent=g8165;Name=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS exon 1874 1988 . - . ID=g8165.t1.exon1;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS CDS 1874 1988 . - 0 ID=cds.g8165.t1;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS exon 1535 1683 . - . ID=g8165.t1.exon2;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS CDS 1535 1683 . - 2 ID=cds.g8165.t1;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS exon 757 1084 . - . ID=g8165.t1.exon3;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS CDS 757 1084 . - 0 ID=cds.g8165.t1;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS exon 460 578 . - . ID=g8165.t1.exon4;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS CDS 460 578 . - 2 ID=cds.g8165.t1;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS exon 204 299 . - . ID=g8165.t1.exon5;Parent=g8165.t1 NODE_3950_length_2472_cov_31.171 AUGUSTUS CDS 204 299 . - 0 ID=cds.g8165.t1;Parent=g8165.t1 #PROT g8165.t1 g8165 MMPHLRASVLRICVLPVACGPHRSYHSLKITTTPHGKEGTAEYTLHFHDASGPLPQRISPWHHIPLFSDPERRLLNYVNEIPRGRREKFEIATKEANNPIKQDMKNGKPRVLSYGGVLHNYGAFPQTWENPHEKTKGVPFVGDNDPLDVLEIGATALPIGAVVPVKVLGIIGLIDEGECDWKIIAIRADDPRAPSLNDIGDVSKKQLDDIRTWYRMYKTTDGKPENEYVFDGQYKDKAFADSVIEECRLSWRRLTSGQLPANKLWFPK* # PASA_UPDATE: g9274.t1, single gene model update, valid-1, status:[pasa:asmbl_1744,status:3], valid-1 NODE_1488_length_10985_cov_36.3452 . gene 1760 6755 . + . ID=g9274;Name=g9274.t1 NODE_1488_length_10985_cov_36.3452 . mRNA 1760 6755 . + . ID=g9274.t1;Parent=g9274;Name=g9274.t1 NODE_1488_length_10985_cov_36.3452 . five_prime_UTR 1760 1869 . + . ID=g9274.t1.utr5p1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 1760 2020 . + . ID=g9274.t1.exon1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 1870 2020 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 2355 2484 . + . ID=g9274.t1.exon2;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 2355 2484 . + 2 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 2648 2789 . + . ID=g9274.t1.exon3;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 2648 2789 . + 1 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 2943 3100 . + . ID=g9274.t1.exon4;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 2943 3100 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 3393 3564 . + . ID=g9274.t1.exon5;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 3393 3564 . + 1 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 3988 4124 . + . ID=g9274.t1.exon6;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 3988 4124 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 4430 4532 . + . ID=g9274.t1.exon7;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 4430 4532 . + 1 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 4914 5164 . + . ID=g9274.t1.exon8;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 4914 5164 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 5395 5521 . + . ID=g9274.t1.exon9;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 5395 5521 . + 1 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 5772 5921 . + . ID=g9274.t1.exon10;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 5772 5921 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 6150 6350 . + . ID=g9274.t1.exon11;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 6150 6350 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . exon 6550 6755 . + . ID=g9274.t1.exon12;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . CDS 6550 6708 . + 0 ID=cds.g9274.t1;Parent=g9274.t1 NODE_1488_length_10985_cov_36.3452 . three_prime_UTR 6709 6755 . + . ID=g9274.t1.utr3p1;Parent=g9274.t1 #PROT g9274.t1 g9274 MDASAPGGSAGPPPPRVLLGADGGRSIVERLSKGKPVPEIAAFQAEHGLNVPTAEPVLPLLDLHLLSRGDFACGLLGTLSLELIKRVESTGHARLRELLDATFPYVQHGELRPIVFSIMRRLPSAPVGMLEHLASRRDFWADSPIEVRRQIWELKPSLFHDEVFPILNAYANDPSIVRMGNEMTGLSVTPPKQRRESAHVQRLVTAIGKSFKLYNITLNVLRSIFARKGVSAYCSLRSELLMAFHDAGVQEIYSFDPCHAFTWCLDACVRDRTFDWRQLQKMEQILREYTEDNPIVGDLAMIICDPFVTNSLTMALFDALQVCVKKERMPAEDNRIMHMILLLSIGETAQAMLRDKQYALPSVSDNFVHHFLPALASMLVDDQLRPLGIHPRDTEGAMMQAVAAMRQARTAKLDSRHEWNKGEFESKYDFREPFMDNKDERKSIIRRGIADDPLARRLMYAYAFERVQHGDLYGLHLVLSPLRTDYADIANESPFLQTLVSIITQRKDKLPTLKFSETLVTSFFLPLAKQSDVAHREYVRLIAETHSKISNVDELKKILLHVAKFGKRDDRQGETCDIATAYKELIEERLKERLGDADKTKIMGLVAPSVADVQGDVEMTDAASTQ* # PASA_UPDATE: g9275.t1, single gene model update, valid-1, status:[pasa:asmbl_1745,status:12], valid-1 NODE_1488_length_10985_cov_36.3452 . gene 7279 10868 . + . ID=g9275;Name=g9275.t1 NODE_1488_length_10985_cov_36.3452 . mRNA 7279 10868 . + . ID=g9275.t1;Parent=g9275;Name=g9275.t1 NODE_1488_length_10985_cov_36.3452 . five_prime_UTR 7279 7657 . + . ID=g9275.t1.utr5p1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 7279 7703 . + . ID=g9275.t1.exon1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 7658 7703 . + 0 ID=cds.g9275.t1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 7943 9279 . + . ID=g9275.t1.exon2;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 7943 9279 . + 2 ID=cds.g9275.t1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 9386 9526 . + . ID=g9275.t1.exon3;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 9386 9526 . + 0 ID=cds.g9275.t1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 9683 9856 . + . ID=g9275.t1.exon4;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 9683 9856 . + 0 ID=cds.g9275.t1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 10229 10357 . + . ID=g9275.t1.exon5;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 10229 10357 . + 0 ID=cds.g9275.t1;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . exon 10683 10868 . + . ID=g9275.t1.exon6;Parent=g9275.t1 NODE_1488_length_10985_cov_36.3452 . CDS 10683 10868 . + 0 ID=cds.g9275.t1;Parent=g9275.t1;3_prime_partial=true #PROT g9275.t1 g9275 MGNVVTSSRVEDVDRVDAGDSADAVLTEGQVRKWLSKNGASFFKSDGFSQILISSAPTSLLREWVKHAAATDADVTLLTWLNERVVADWKKIQHDELRRSRDDVLASLPTAAPAAPNKGINGTNAHPQVPVMVQSDIVVSVVDGGDRRPSKPTEFASESATKPIASAPSFVVTSDDYDETEAMDEFSNFQSGDHASDFIPLIAPGLGTSRGPRMDRKPSISIVPPMHSRVQSCSMLAGISAEHRLSMFNIAATDITASFVALPISGPSLVPTLINGETIIGRKRQQSWVGVPLNLKRTKTAAELDERTRREMMLSMAKEIYNELDLTSLVRQILLNAGAMVAADRCSFFLVDKSTNEVYSKVFMPVNSGDAKEESEELEEMEIRIPVGVGIVGHVASSGDLLNIVDAYKDPRFNSEIDRKTGYLTKSMLCLPIKGPNDEIVGVAQLINKIDGQCFSDNDVEVFREFLVFCGIAVRNAQLYEEATRASRESEALLQLTMGLFEEADFAQVVEKIMNTARELASADRCSLFLVDHKTDELFSIVFGEAGEYSEIRLPKNKGIAGHVASTGETLNIYDAYSDDRFNKEVDERTGYQTKTILCTPLFVESRDQIVGVCQLVNKRGGPFTPDDERFFAAFAVTCGICLYKAQLYEKATKAEERTRVCLELISYHAQ # ORIGINAL: g9273.t1 original gene structure, not modified by PASA NODE_1488_length_10985_cov_36.3452 AUGUSTUS gene 236 1405 . - . ID=g9273;Name=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS mRNA 236 1405 . - . ID=g9273.t1;Parent=g9273;Name=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS exon 1310 1405 . - . ID=g9273.t1.exon1;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS CDS 1310 1405 . - 0 ID=cds.g9273.t1;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS exon 980 1098 . - . ID=g9273.t1.exon2;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS CDS 980 1098 . - 0 ID=cds.g9273.t1;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS exon 490 757 . - . ID=g9273.t1.exon3;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS CDS 490 757 . - 1 ID=cds.g9273.t1;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS exon 236 324 . - . ID=g9273.t1.exon4;Parent=g9273.t1 NODE_1488_length_10985_cov_36.3452 AUGUSTUS CDS 236 324 . - 0 ID=cds.g9273.t1;Parent=g9273.t1 #PROT g9273.t1 g9273 MAAAPTLTARELIEQKDAIESEIRTLMDVLNTYKVGMNEPLIDAEGYPRGDIDIHAVRVLRNQIIRLQNDHKAVMLSIEKKLHEVHQRARETEVESANGTHNEQWAEKRKPFALVELVSEGSPAESAGIRATDRILKFGSIDASNFTGMQAIAEVVRNSENVFVPLMVERSGRVHNLTLVPRKWSGQGLL # ORIGINAL: g6789.t1 original gene structure, not modified by PASA NODE_1278_length_12442_cov_41.6009 AUGUSTUS gene 1644 2631 . - . ID=g6789;Name=g6789.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS mRNA 1644 2631 . - . ID=g6789.t1;Parent=g6789;Name=g6789.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 2442 2631 . - . ID=g6789.t1.exon1;Parent=g6789.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 2442 2631 . - 0 ID=cds.g6789.t1;Parent=g6789.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 1644 2359 . - . ID=g6789.t1.exon2;Parent=g6789.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 1644 2359 . - 2 ID=cds.g6789.t1;Parent=g6789.t1 #PROT g6789.t1 g6789 MMQQKTMSNSRMSGRSRWSSERRRHQQRPSGSVGRSAVVGKACDSSDGCLDESSGISADESTYTGTWSSSSRANQVTASRGSCQYDYCVFLGRDFSVVVPKNAFTLLHNGIQRGTSVAVRVASDFDPFRRPCEMDLSLDARRMLNSPNAGGNSLDSEVLSFELFSRVFGARLDKTEMEIRYWPRGGSLTDYTCNISGVTVGVSVTRAMNFKGAFEEEDAHRLLTKKLTGVTAANRCSLEGWSKQILHVWATSNAVAETVARVWETQLDAVVKGNTVVLVTVARRAKWLFSNSKGANQWTMS* # PASA_UPDATE: g6790.t1, single gene model update, valid-1, status:[pasa:asmbl_1052,status:3], valid-1 NODE_1278_length_12442_cov_41.6009 . gene 3230 4471 . + . ID=g6790;Name=g6790.t1 NODE_1278_length_12442_cov_41.6009 . mRNA 3230 4471 . + . ID=g6790.t1;Parent=g6790;Name=g6790.t1 NODE_1278_length_12442_cov_41.6009 . five_prime_UTR 3230 3342 . + . ID=g6790.t1.utr5p1;Parent=g6790.t1 NODE_1278_length_12442_cov_41.6009 . exon 3230 4043 . + . ID=g6790.t1.exon1;Parent=g6790.t1 NODE_1278_length_12442_cov_41.6009 . CDS 3343 4043 . + 0 ID=cds.g6790.t1;Parent=g6790.t1 NODE_1278_length_12442_cov_41.6009 . exon 4164 4471 . + . ID=g6790.t1.exon2;Parent=g6790.t1 NODE_1278_length_12442_cov_41.6009 . CDS 4164 4446 . + 1 ID=cds.g6790.t1;Parent=g6790.t1 NODE_1278_length_12442_cov_41.6009 . three_prime_UTR 4447 4471 . + . ID=g6790.t1.utr3p1;Parent=g6790.t1 #PROT g6790.t1 g6790 MPGIVSAVRRLVGRPTTASSAASPAPATPTKPSVKMARSTPAKSTAAVVSSTKTACPTKQSTASSTGARSSAVAAPVRTTHAISKPPAQLKDSLPKDDVKGRTGPSVGQTVVPLTGKSATTVAAARESDAEALVYRTYADAQTGLIEIEGTERLCSDLELDPSDARILALAWKCGAKRMCVFTADEFCQGLRALNARSIADLRKGIENLVGTLAKDDAAFSSFYQFAFEFGIDRDKGERTLPIEIATALWPVAFQPRPTPWMPEWLAFLESSRTKGISRDLWRLFPEFVAQVQHTSDMQGYSEEDAWSSAIDEFVQWVRAQGQQYAV* # PASA_UPDATE: novel_model_4_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_1053,status:3], valid-1 NODE_1278_length_12442_cov_41.6009 . gene 4761 6320 . + . ID=novel_gene_4_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1278_length_12442_cov_41.6009 . mRNA 4761 6320 . + . ID=novel_model_4_5b6be656;Parent=novel_gene_4_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1278_length_12442_cov_41.6009 . five_prime_UTR 4761 4815 . + . ID=novel_model_4_5b6be656.utr5p1;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 4761 4931 . + . ID=novel_model_4_5b6be656.exon1;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 4816 4931 . + 0 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 5099 5182 . + . ID=novel_model_4_5b6be656.exon2;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 5099 5182 . + 1 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 5304 5388 . + . ID=novel_model_4_5b6be656.exon3;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 5304 5388 . + 1 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 5562 5638 . + . ID=novel_model_4_5b6be656.exon4;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 5562 5638 . + 0 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 5794 5884 . + . ID=novel_model_4_5b6be656.exon5;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 5794 5884 . + 1 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . exon 6087 6320 . + . ID=novel_model_4_5b6be656.exon6;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . CDS 6087 6200 . + 0 ID=cds.novel_model_4_5b6be656;Parent=novel_model_4_5b6be656 NODE_1278_length_12442_cov_41.6009 . three_prime_UTR 6201 6320 . + . ID=novel_model_4_5b6be656.utr3p1;Parent=novel_model_4_5b6be656 #PROT novel_model_4_5b6be656 novel_gene_4_5b6be656 MLKVNKSAKQKFYDPEGKDVIKILFLGSAKAGKTAILERFVSGEFSPEYRQTMGSELLVKQVTIHDSQKAVLHVWSCGGHPRYRPLLTNYYYNAKAAVIVFDMTDINSFKDVLFWYNEVQRMCPEAIVTLVGTKSDKEDLVRVTPEECAKQAKAWSVKHVIVSSSSGDGVAVLFKEVLHSLHAAITEA* # ORIGINAL: g6791.t1 original gene structure, not modified by PASA NODE_1278_length_12442_cov_41.6009 AUGUSTUS gene 6456 8233 . - . ID=g6791;Name=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS mRNA 6456 8233 . - . ID=g6791.t1;Parent=g6791;Name=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 8088 8233 . - . ID=g6791.t1.exon1;Parent=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 8088 8233 . - 0 ID=cds.g6791.t1;Parent=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 7155 7916 . - . ID=g6791.t1.exon2;Parent=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 7155 7916 . - 1 ID=cds.g6791.t1;Parent=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 6456 6855 . - . ID=g6791.t1.exon3;Parent=g6791.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 6456 6855 . - 1 ID=cds.g6791.t1;Parent=g6791.t1 #PROT g6791.t1 g6791 MPVPDCTLALGRSLSRPRAAAVAMHARTRGRPNVWCLTAVYIVASCCRSTVKAPRRLASIALSIVFAVVVAAAYTFLFHEKDFATHGLLAGLHITSSQKSVVWKSGVGTTAFYSHLKVSSTELANTLELVSHDVVMCLSASADKTDALVRVISSWEGPIAIAIFCRDDAGEELLLEALPVLLRGGRNTALVLVRALVKDMMYPINAMRNFATALVPSDLGFAVFVQDADMLMSRGAYTALVRINANGDDKRAYVIPCFEFGADSYDMKADVRKIPRTKAELVLTTKENLTRQSKVSYFPRGHSCTEYARFLYGNDVEPWPQSTYHWQYDPFYMARKTFMLPRYDEEYVFWACNKQSNAFLLFALGFRFWTVPNVFSVHHPHSLVTDARIESHLLQIKRNRARYLLMRTAQARRYNVDLAFQDYEVQGTPNFTMPK* # ORIGINAL: g6792.t1 original gene structure, not modified by PASA NODE_1278_length_12442_cov_41.6009 AUGUSTUS gene 9340 12309 . + . ID=g6792;Name=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS mRNA 9340 12309 . + . ID=g6792.t1;Parent=g6792;Name=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 9340 11430 . + . ID=g6792.t1.exon1;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 9340 11430 . + 0 ID=cds.g6792.t1;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 11602 11875 . + . ID=g6792.t1.exon2;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 11602 11875 . + 0 ID=cds.g6792.t1;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 12069 12197 . + . ID=g6792.t1.exon3;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 12069 12197 . + 2 ID=cds.g6792.t1;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 12305 12309 . + . ID=g6792.t1.exon4;Parent=g6792.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 12305 12309 . + 2 ID=cds.g6792.t1;Parent=g6792.t1 #PROT g6792.t1 g6792 MTKDGGKVKTWKRRWFVLRQRADKMPARLEYFKDDGKKESLGSILLDWNVKVIRLDPLVVGKKHVLQVVTNSREYTLIGESERDYDHWVQLLEQVVVSETTAQPAIPATRASGSAAKVTMCGFLEKCGGSVKNWKRRWFLLRSGKLCYYKAENSSESLGIIPVESILGVAAVEGGDKPFMFEIVTAGRTYLMAASAKSEMERWVRTVDSAIDEIRNSLPESDSTSASFTSFGSTSSSAPDPAEDAARSAMAQFQSMLSSAGLIAPDSERETQLHYATLSFAKGPSEPQKDAALSSSGVTATAPVSGTQDANIATMYAQPIRRQNSSDKLRQVKAPPPEPPAHKKEEKKSTRPSSPTAPGSPVPAPAIVGSAPAASTHAGPAPAPAVGPAELPSAPIRVVQHDTAMMGEMENLLSSMNSLTTKRTTVAQPLVPVASATTTSVTTPANTESVVVDPAMMGEMESLLSSMNSLAIKRATVAQAPAAAASATAEATRAPAKTESVVVDTAMMGEMESLLSSMNSLTSKRATVAQPSTGGAASATANTARTLTNTASVVDPAMMGEMESLLSTMNNSFSSKRATVAPAAAVAPPAPEQPAAVNPEHERALAELERARAERRRAEEELERAEEEERQRVEAERMAKVNELERLREEMARAERERRAAEEALLNEERLAAEERERAREALEKERQRIEQERQEAEQERLRSIQRQKADKEREELERQEAERQRVLEEERRLERERLEVEAKRAAIEQKKREESDALKAFVQDLLIETDSSTLESLTRTVADRVGKDPGANEGRFASQDVVNRLLALLRWPHRKVMFNSARALSSLAKNE* # ORIGINAL: g6788.t1 original gene structure, not modified by PASA NODE_1278_length_12442_cov_41.6009 AUGUSTUS gene 207 1081 . + . ID=g6788;Name=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS mRNA 207 1081 . + . ID=g6788.t1;Parent=g6788;Name=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 207 358 . + . ID=g6788.t1.exon1;Parent=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 207 358 . + 2 ID=cds.g6788.t1;Parent=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 509 779 . + . ID=g6788.t1.exon2;Parent=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 509 779 . + 0 ID=cds.g6788.t1;Parent=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS exon 984 1081 . + . ID=g6788.t1.exon3;Parent=g6788.t1 NODE_1278_length_12442_cov_41.6009 AUGUSTUS CDS 984 1081 . + 2 ID=cds.g6788.t1;Parent=g6788.t1 #PROT g6788.t1 g6788 RAMHLNRGMFLQNGRCGYVLKPAPLRSPDSLFDPTNPDYCFSTKKRLSIKLISGHMLRHPTITKSAVQPVVTVETVGVPSDCKVAATVRPQSGDSNCTFAETVTVDLVMPALAMVYIVVTDAATKTLVGQRAIPVDIMQHGYRHIPLCSETGAEIDLCSLFVFIDFLEMPSK* # ORIGINAL: g2685.t1 original gene structure, not modified by PASA NODE_3424_length_3501_cov_44.4857_potentialcontaminant AUGUSTUS gene 81 357 . + . ID=g2685;Name=g2685.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant AUGUSTUS mRNA 81 357 . + . ID=g2685.t1;Parent=g2685;Name=g2685.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant AUGUSTUS exon 81 357 . + . ID=g2685.t1.exon1;Parent=g2685.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant AUGUSTUS CDS 81 357 . + 1 ID=cds.g2685.t1;Parent=g2685.t1 #PROT g2685.t1 g2685 LVKQQKQFAELKQQKLAEGKRLLIIEVDGPHQESLAYYQAKYGVDASFIENSTMLVTPENIEIMLNDTLHPYGHGYALGTDRRATTVLSIA* # PASA_UPDATE: g2686.t1, single gene model update, valid-1, status:[pasa:asmbl_6047,status:12], valid-1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . gene 383 1868 . - . ID=g2686;Name=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . mRNA 383 1868 . - . ID=g2686.t1;Parent=g2686;Name=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . exon 1323 1868 . - . ID=g2686.t1.exon1;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . CDS 1323 1868 . - 0 ID=cds.g2686.t1;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . exon 1083 1184 . - . ID=g2686.t1.exon2;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . CDS 1083 1184 . - 0 ID=cds.g2686.t1;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . exon 632 1006 . - . ID=g2686.t1.exon3;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . CDS 632 1006 . - 0 ID=cds.g2686.t1;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . exon 383 554 . - . ID=g2686.t1.exon4;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . CDS 501 554 . - 0 ID=cds.g2686.t1;Parent=g2686.t1 NODE_3424_length_3501_cov_44.4857_potentialcontaminant . three_prime_UTR 383 500 . - . ID=g2686.t1.utr3p1;Parent=g2686.t1 #PROT g2686.t1 g2686 MTNESAQKGTRKRPTEESTASSRKKQKTLDTADVVEINKNAPKEANGKEVANDEAAKGKDASNGDEASNGDEASNDETANGDEASSGDEASSGDEATNGDEAANGDEAANEHSKSTPYKGIVPVRGGTYKVMVEEQRRRSKKLYETTGYVFVVASDSKKLMATVQWYEQGSKLRHNTKIPIAERKKLSVAKGYLVLTNQRNEIPFQSIAQEFRLSKERFDNVRLQGDTLDFSHQWPADSNNEVDSNDNHKQRCAIVPARQTKSARKARKAGTAGKAGTARKAGTAGKAGKPSARGTVVDLALVDKLERCMDLMSRSQRNSNAQVARMCKAIDTNSRMLLAIVENRGIVQAGRLPQIEQ* # PASA_UPDATE: g5165.t1, single gene model update, valid-1, status:[pasa:asmbl_1586,status:12], valid-1 NODE_1439_length_11285_cov_52.5972 . gene 7509 9148 . - . ID=g5165;Name=g5165.t1 NODE_1439_length_11285_cov_52.5972 . mRNA 7509 9148 . - . ID=g5165.t1;Parent=g5165;Name=g5165.t1 NODE_1439_length_11285_cov_52.5972 . exon 9095 9148 . - . ID=g5165.t1.exon1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . CDS 9095 9148 . - 0 ID=cds.g5165.t1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . exon 8814 8930 . - . ID=g5165.t1.exon2;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . CDS 8814 8930 . - 0 ID=cds.g5165.t1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . exon 8674 8727 . - . ID=g5165.t1.exon3;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . CDS 8674 8727 . - 0 ID=cds.g5165.t1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . exon 8094 8427 . - . ID=g5165.t1.exon4;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . CDS 8094 8427 . - 0 ID=cds.g5165.t1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . exon 7509 7994 . - . ID=g5165.t1.exon5;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . CDS 7801 7994 . - 2 ID=cds.g5165.t1;Parent=g5165.t1 NODE_1439_length_11285_cov_52.5972 . three_prime_UTR 7509 7800 . - . ID=g5165.t1.utr3p1;Parent=g5165.t1 #PROT g5165.t1 g5165 MVFTVIRDEFDAVLHLLVLPAFFKPHEIAHITTTCYLLAAGTHGQVEDVIFKLPGAKEIERLGPVAIANAAVHNGVMQRKFHIPRTVVERFTGLCRSCPEKGRPVPASGTLRPIRTDAFLDRIQIDLINLAATPDGSYKYILTVRDHFTRCTWLYALQTKEAQGVADNLEKQFDLFGAPSILQSDNGKEFVAHVIKALAATVNATLINGRPYHPQSQGSVERANGVVSDLLYKWMRDKARTDWHNGLSSC* # PASA_UPDATE: g5164.t1, single gene model update, valid-1, status:[pasa:asmbl_1588,status:12], valid-1 NODE_1439_length_11285_cov_52.5972 . gene 176 4375 . + . ID=g5164;Name=g5164.t1 NODE_1439_length_11285_cov_52.5972 . mRNA 176 4375 . + . ID=g5164.t1;Parent=g5164;Name=g5164.t1 NODE_1439_length_11285_cov_52.5972 . exon 176 1628 . + . ID=g5164.t1.exon1;Parent=g5164.t1 NODE_1439_length_11285_cov_52.5972 . CDS 176 1628 . + 0 ID=cds.g5164.t1;Parent=g5164.t1;5_prime_partial=true NODE_1439_length_11285_cov_52.5972 . exon 1910 3206 . + . ID=g5164.t1.exon2;Parent=g5164.t1 NODE_1439_length_11285_cov_52.5972 . CDS 1910 3206 . + 2 ID=cds.g5164.t1;Parent=g5164.t1 NODE_1439_length_11285_cov_52.5972 . exon 3448 4375 . + . ID=g5164.t1.exon3;Parent=g5164.t1 NODE_1439_length_11285_cov_52.5972 . CDS 3448 4363 . + 1 ID=cds.g5164.t1;Parent=g5164.t1 NODE_1439_length_11285_cov_52.5972 . three_prime_UTR 4364 4375 . + . ID=g5164.t1.utr3p1;Parent=g5164.t1 #PROT g5164.t1 g5164 STAALSGSSLTQFRVSPDKCTVNMRGATNDSNSVGAHAAHHALQSSRGRPSMRQSLALLAIVSVVLFLLVGGVPWESMVTPDYTYTRTKLSTGQYADGVHARLDHGRRAALPDSTATIDIDAKCSERRQRDSAAAKRNVVGPVGAFGDCGGTPGGAGHVSTSAVGAGSSIHVGVVVIPETSTEDVMSTIRSVRTALPHATIAVFDNPRGLLVAPLSALLDPKIEYGVLPNGTGTCAQLETLVSRAQAPYFVGIAAGVVVNVKTNVAGMIEQIESAGADLIVGVVGQSEPRCEHLTVIDNVLAFAPGESAGYGACSICDSFGMELFAARTCALRTVGWDSAITDDEIAERDFFVRAHTLGFSALVCRAHAADVSLRLPSRAHTYRGGGNATSIFLEKHRLVGAGYYDYHDIASPSANTRGVHAVGDAVSSLAMWHILETLHGPMQWTRDDLLFPCRCNLAASAAGESALVCSHQLPRGFVAGPCDDLAERGLDDIPVSETFIVESSFRVVLPERKEIFRASALAVSLLYPSPNSDSEGDLASEKRTTLRSYGRIDRRVDPLHGTEYHMDLVMIHREGLNNEVVDRPTVVLFKSIHPYLLPFAGLVETNGDARVIFVVAIPFNYWRMRELTDEFRAIKYTTPGNAELVVVAHGLVRLPVKSRWTETPPLARMLTEISNMRTTLIYATADNDRPGCANMRTECALQLALDREPAIFARDTDIALIMDGDVSLPIYAMRIVRERTAHTRQVYAPMPFAFAPGRNKTGLHAPGQYWNVYYNYEKHGTWAVDDYSTVGACIGDLRRALDVPTKSRAMAGLGLQAGVYGRPGNSGAGSLLLHFLRIGRKVVRTREPYMYRAPMQSTVPRWPRVYIYDMPSDFVADVLAFNQESMQSVPTKLGITRDEFDCRRNAASIEVHLESFIRHSPIYTSDPNAADFFYVPIPSVCHVYNHPPFNSNRAADFHRRVITHIAGSHPFWNRTAGANHIFVAAHARGRNIFQNHELFRNAIVLCVSGDRSDPTAFDAWRDIVIPPFFPVAERQSMKMTQPFSIYRARPTKVVFIAAPQDGDAIPPNDVTKFIRLRASREAGVLSADTRRLTSVAIASLLRNSTLSLCIGEAHAYTPRLKESLLAGAVPVVLARSLAHPFEKDIDYASFAVLVPEAGTTTGVDRLPSLIRSIKPADIEDKQANIAAAVRALSYNEVALPGDAVYRIAHELRKMKDHKHY* # PASA_UPDATE: g5166.t1, single gene model update, valid-1, status:[pasa:asmbl_1587,status:12],[pasa:asmbl_1589,status:12], valid-1 NODE_1439_length_11285_cov_52.5972 . gene 9786 11285 . + . ID=g5166;Name=g5166.t1 NODE_1439_length_11285_cov_52.5972 . mRNA 9786 11285 . + . ID=g5166.t1;Parent=g5166;Name=g5166.t1 NODE_1439_length_11285_cov_52.5972 . five_prime_UTR 9786 9927 . + . ID=g5166.t1.utr5p1;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . exon 9786 10156 . + . ID=g5166.t1.exon1;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . CDS 9928 10156 . + 0 ID=cds.g5166.t1;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . exon 10266 10295 . + . ID=g5166.t1.exon2;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . CDS 10266 10295 . + 2 ID=cds.g5166.t1;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . exon 10703 11285 . + . ID=g5166.t1.exon3;Parent=g5166.t1 NODE_1439_length_11285_cov_52.5972 . CDS 10703 11285 . + 2 ID=cds.g5166.t1;Parent=g5166.t1;3_prime_partial=true #PROT g5166.t1 g5166 MADPIYANFMKVQEEIDAVTARIAKTERKTKELKKLRKDRELTAFQKEELARREKKLEVLRDEKIELLKQKSFAIQAGVNAGALAFVPQWFVVQGALAKTKGVSGLRYSIFSIADRHMSYEREPGSATRYVDFDLEFEFLFNTMGRAEKFIRDVMRIPIDNPMLGWLRDRVVIREPVLLSPTLPPTRVFALNYRSNMGSPPTFSLADFAVPSETSSVTGVDWSDDVISRSVESDWYRTTSRPYRLHLKSKALFPGVQNDPDNVLYGSWMFHCLLDGLNRP # PASA_UPDATE: g10079.t1, single gene model update, valid-1, status:[pasa:asmbl_5078,status:3], valid-1 NODE_281_length_28337_cov_42.1551 . gene 10488 11710 . - . ID=g10079;Name=g10079.t1 NODE_281_length_28337_cov_42.1551 . mRNA 10488 11710 . - . ID=g10079.t1;Parent=g10079;Name=g10079.t1 NODE_281_length_28337_cov_42.1551 . five_prime_UTR 11583 11710 . - . ID=g10079.t1.utr5p1;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . exon 11386 11710 . - . ID=g10079.t1.exon1;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . CDS 11386 11582 . - 0 ID=cds.g10079.t1;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . exon 10996 11179 . - . ID=g10079.t1.exon2;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . CDS 10996 11179 . - 1 ID=cds.g10079.t1;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . exon 10488 10846 . - . ID=g10079.t1.exon3;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . CDS 10691 10846 . - 0 ID=cds.g10079.t1;Parent=g10079.t1 NODE_281_length_28337_cov_42.1551 . three_prime_UTR 10488 10690 . - . ID=g10079.t1.utr3p1;Parent=g10079.t1 #PROT g10079.t1 g10079 MGSKRLSAAFAAMFFTAVSGIIVCFIVGSNETPWSFDHDANAQIVGLAEGVALDEWFKTLPRPTDRGLPEYLRMLYSTNLISAALNCTFLFLIVFLASSNTALVLATQVTTCVYVLLLTYALPEGNKDTLHRSFFTSLAAMNVVGLVLHYMYSQSVAIAPQPQRQRAPSVSPAAAVAS* # ORIGINAL: g10081.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 12780 16451 . - . ID=g10081;Name=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 12780 16451 . - . ID=g10081.t1;Parent=g10081;Name=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 15726 16451 . - . ID=g10081.t1.exon1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 15726 16451 . - 0 ID=cds.g10081.t1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 15393 15580 . - . ID=g10081.t1.exon2;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 15393 15580 . - 0 ID=cds.g10081.t1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 15136 15285 . - . ID=g10081.t1.exon3;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 15136 15285 . - 1 ID=cds.g10081.t1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 14768 14967 . - . ID=g10081.t1.exon4;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 14768 14967 . - 1 ID=cds.g10081.t1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 14378 14529 . - . ID=g10081.t1.exon5;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 14378 14529 . - 2 ID=cds.g10081.t1;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 12780 14093 . - . ID=g10081.t1.exon6;Parent=g10081.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 12780 14093 . - 0 ID=cds.g10081.t1;Parent=g10081.t1 #PROT g10081.t1 g10081 MDSEEEEFIDLTVAQPVVVPARRNIPVDVKPQLIDLDDDSPVDGGGALALEDKGKGKVPAQDGADVVMIDIEDEEEESPPRMHSLLLSANGKRPFEHPKSELKPMVDVKSDFGLAAKRARRDRETPMRMQRPRLFAPFGRDLDVNIFGAVADDDAPGGSEKGREQAQLLAGADPDDLDPIVVEGMLEGLAHETIKPAEPHTDLRAELYPYQKIGLAWLLKMERGWGTLPRGGIIADEQGLGKTVQMIALILSERPERSPSTPRNTRQPFRTLVVAPLALLRQWESEINNHSRVALNIVIYHGTDRERDPAYLATSDIVITTYHTLAQETPRAEERDADNRLLKARVPPGPIFKVKWFRIILDEATAIKNPLSSASKSVAKLVAERRWCLSGTPIQNRLEELFPLFRFIRYHPYDDPVTFKELAPKTRGGEDLENLQRLRSALAAVCIRRLALTQMDGKPILVLPRCVIEYKRVPLSEEELDFYRAIEEQTQVQFSRFLKAGTVIRNYMNILQLLLLLRQACCHPMLVKEAAAKAALQAIEPFEKEKNNPPPADGLPEAAAALTEDARNRLKEGNVDSECPICLDVPDDAEGLITKCGHTFCRTCLYAAIGLDDAQPLSRGLCPSCRREITPRDCLKKTLLLPPPPPPPAPADKEGSDDKGKGPAVDDEGDEDDAELLRTNPLGAIRRLRTRFSRTHMTSTKILQLMEVLDTSLAIEPPTKVLVFSQWTSMLDLVEAPLQRHGIRYLRYDGSMSADAREAVIAEFKTSKTHRVLLCSLKCAGMGLNLTVASRVVLMDPWWNPFLHEQALKRVHRIGQTRDVHVTHITIADTVEDRILALQDYKRNLANAALGDGAAEDSRLTLQQLVRLFGLDLLYNRRPQNKGLVIDADARDNAPDPEVGAVGADGRAH* # PASA_UPDATE: g10085.t1, single gene model update, valid-1, status:[pasa:asmbl_5075,status:3], valid-1 NODE_281_length_28337_cov_42.1551 . gene 25828 28129 . + . ID=g10085;Name=g10085.t1 NODE_281_length_28337_cov_42.1551 . mRNA 25828 28129 . + . ID=g10085.t1;Parent=g10085;Name=g10085.t1 NODE_281_length_28337_cov_42.1551 . five_prime_UTR 25828 26109 . + . ID=g10085.t1.utr5p1;Parent=g10085.t1 NODE_281_length_28337_cov_42.1551 . exon 25828 26407 . + . ID=g10085.t1.exon1;Parent=g10085.t1 NODE_281_length_28337_cov_42.1551 . CDS 26110 26407 . + 0 ID=cds.g10085.t1;Parent=g10085.t1 NODE_281_length_28337_cov_42.1551 . exon 26682 28129 . + . ID=g10085.t1.exon2;Parent=g10085.t1 NODE_281_length_28337_cov_42.1551 . CDS 26682 27688 . + 2 ID=cds.g10085.t1;Parent=g10085.t1 NODE_281_length_28337_cov_42.1551 . three_prime_UTR 27689 28129 . + . ID=g10085.t1.utr3p1;Parent=g10085.t1 #PROT g10085.t1 g10085 MRVQSGLRCGAPGTHSVAVLVLAFACALVSVLVAIAGAVPSSGDGSDEDMMARMDVLRFSETLARLEADWQREMGALEATVTCDFSREKERYIAACISPGTGVMEPCSIDCLETYADYHVRLESAECQSGAKDSIDEVLASLRSTFARERQLRCPPVSAVSAGLSSYLVGVLGECGDGRCGPLELCVTCAADCGVCAMCGDGLCNERHESCSTCPGDCGICARCGDGVCNGDEVCATCPADCECSSCGDHKCTGRENCITCFGDCGECPICGDGVCDNVHQGRNDTLYIYKETHATCPEDCGADVVDESTRNSFDAEAVRAYVRRYIDVGGTVELRDHDSDRKLVGRATERGFDVYDSDGRLVDLRDLQTETAVLEHARSMYYAEKAKEADMEANRAMTHKGVRVIGSAFVGCAALVAVAVLAYRRRASVGDQS* # ORIGINAL: g10076.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 450 5940 . + . ID=g10076;Name=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 450 5940 . + . ID=g10076.t1;Parent=g10076;Name=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 450 1358 . + . ID=g10076.t1.exon1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 450 1358 . + 0 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 1601 1650 . + . ID=g10076.t1.exon2;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 1601 1650 . + 0 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 2052 2113 . + . ID=g10076.t1.exon3;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 2052 2113 . + 1 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 2350 2457 . + . ID=g10076.t1.exon4;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 2350 2457 . + 2 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 2642 2814 . + . ID=g10076.t1.exon5;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 2642 2814 . + 2 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 3092 3275 . + . ID=g10076.t1.exon6;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 3092 3275 . + 0 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 3533 3642 . + . ID=g10076.t1.exon7;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 3533 3642 . + 2 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 3821 3940 . + . ID=g10076.t1.exon8;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 3821 3940 . + 0 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 4218 4672 . + . ID=g10076.t1.exon9;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 4218 4672 . + 0 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 4972 5154 . + . ID=g10076.t1.exon10;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 4972 5154 . + 1 ID=cds.g10076.t1;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 5265 5940 . + . ID=g10076.t1.exon11;Parent=g10076.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 5265 5940 . + 1 ID=cds.g10076.t1;Parent=g10076.t1 #PROT g10076.t1 g10076 MARIPLPSVDAIITSCSANPLLNAAFSPPALDADGAVNCESEDAQPLGSSVSGSTDTHIHGPNVAYASQIQVCINSEDREITAELSSAKAFGNTFSGVRVDEMDLKVDAASASLTFIVNPLLSDAGGAHVAEERGTLHSDRDVRVTVNATLDIGVDDGARFPLSAAEVGAICEPESSLQPDVCKTHTVHASGTMHAHDAAPRDQHIAGVGDGSGRLDGGAVDSIGNPAWPSGAPVDSDEPPGRRPSELVHALVKDNVDVRDSVYPRAKDRGKASAGTTGRHVTFATQLSTQYSDSLLTDEELMSFAKSDAVCRALKPPGRRIRQHKYAVYLGKASEFHLGDRFPFLSRMDLFLEKYQLNFFVFLTVLGILVAAVCYGLEKLVSLLISGVNSLVSSAGPWGSEYVVFVSVNTALFVVAFYVTQYFGPTAAGSGIPEMKAVLFGAELPDLLTLRTGMTKFVALVLVSGARLSVGMEGPFVHMSAVIATFMLGLPFFRSLAIDSLHRRHALSAACSAGVTSLLLAPMSGILFSVEVTSIYYLVKCYWYSAVAAATAAITTWLMYKEAVFPTSLPPSPFTRNEFVAFILIGIVGGVGGALFVRLVDRMAAFRASYLPPKSKRLAVVSLVVVVAMLALQFPWTFLQESIQDQITFLFNEPVLAGGAWGAMNTYGGLVISLVARFLSTAVMINVPVPSGVLFPSLLMGASFGRLVGQIALSIDGYSNPETYAIVGAAAFIGGVTRAVSSAFVIMELTWQQNAMLPVFVAVVCAIGTGNQLSFSLYDAMRIRKGLPHPPPERREWPSEATAKELMIATPHCVPKQTTMRFLASLLASPSSSHFSYPFVDSAHAMTLIGAVGREGLLRAYGRWARDWLPSIASVGRDFSGASFGDDMLGTDVSSGARLDASSPEMTAPSTSFPMVETPPPRAATGSATVGLPVPGPDVTLNLLDYCMHEDIDVSPVQVPTGASMGDVQEMLSLLGAERLIVVARGGRMAGIITRKMFLAEMNAADWN* # ORIGINAL: g10083.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 19920 23547 . + . ID=g10083;Name=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 19920 23547 . + . ID=g10083.t1;Parent=g10083;Name=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 19920 22130 . + . ID=g10083.t1.exon1;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 19920 22130 . + 0 ID=cds.g10083.t1;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 22237 22325 . + . ID=g10083.t1.exon2;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 22237 22325 . + 0 ID=cds.g10083.t1;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 22434 22658 . + . ID=g10083.t1.exon3;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 22434 22658 . + 1 ID=cds.g10083.t1;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 22871 23206 . + . ID=g10083.t1.exon4;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 22871 23206 . + 1 ID=cds.g10083.t1;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 23310 23547 . + . ID=g10083.t1.exon5;Parent=g10083.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 23310 23547 . + 1 ID=cds.g10083.t1;Parent=g10083.t1 #PROT g10083.t1 g10083 MESADAIQLVVASTPFAPRGAKDLTMADAAAETRTEKHLTKPCQAIFSRDGADVDVTGVSSEVDADGTFGSLEATRRALVAETAWLWKCLHTIEANAAAVPQHVASSLPAHRRPPRCLSPTYEPLVSRHTLLHGDSSVVYPQSVACGSPTSTRTPCNNPKGRSLIVERSAASVIESSRRSDGVVFLSGRSDLTTREPTGLCREEALPDAQPTTATPSRMLAGACWREMSPRLSLSQFSRTKAAPRAVEHFTLPDDQFAGLKLERMRTASPCFPESAAAAPPPSVLLREASGAHSAADKIASCSDGGTSRDQQSPHSLWTYCALGDDGARNSESDTAVGHVQSHTTSAPLSPVPLPTQGMQHPACASMQEGRVGSSCGVAESFAGATNGSSQRAFPPSASSEMSASSAAVSCAGEQGCNPIAPQGAAVAAMTPAAVVQAAKESTRSPLTDVGDGPGGSGFSITAEQAHTQPPEPCRTAPAVTAMAVTDAETAERLEICRRGDSFNAVSQCILWEAQSGTVESHVAGSAPAACFAEPLPWSRMKQDKESAPIPAAFVVAIASNADDADDATQLPACQAPSATESASGGHQAALVATVAPAGHCTHDPAPATSSPQPGMQNEAIDKCNSQVLPSAHLSAPRSGKSPSLVSTPPTLQEPLLRTASVCSVGIAANDAHTASPPARISSRHTLALEACRLQRQPVFAVALAHFRAALITCSPLAKILWVRSDEGQWKMSQAFEFGDDMPTVVQFSLDDSCVVFGGAFTACHIRVWDVSGNELRVPGTAGQCRPGETLAALTLVGGTTIRGLRRPNAGVVYATVGNADRSGGAPSSSIFYLRAKSNSWVTLGDHVRLPYPSDVSPPEAVLQPRDLLAHVVACSRDSAVCISLSRRNEVLWVVRTSTPLPVPFDILAANGSGAFLALVASSQGQPTLVARTASGDTLLKAYCREGCESEEQGTRRACKAATRYVAAPVDGGMALWNAASAARVATLRIGQGTDHVTALDINDRLGIVAAGTSGGCLHVYGLARGNETSAA* # ORIGINAL: g10084.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 23621 25009 . - . ID=g10084;Name=g10084.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 23621 25009 . - . ID=g10084.t1;Parent=g10084;Name=g10084.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 24915 25009 . - . ID=g10084.t1.exon1;Parent=g10084.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 24915 25009 . - 0 ID=cds.g10084.t1;Parent=g10084.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 23621 24752 . - . ID=g10084.t1.exon2;Parent=g10084.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 23621 24752 . - 1 ID=cds.g10084.t1;Parent=g10084.t1 #PROT g10084.t1 g10084 MAGKQEQTWAHATDEAASWVVLVSAAQSQHVRRLLETDGLYDDARRMGRIEDGTMAVPITDAAKELFITLSAPSSTETLASIHALHSMEAACRRVPLVPSRTAQIKSPIEVLLSVLGSRFGAGGIPAHLLAEVPRKWEVHGDLAVLHEGAFVSEGEWLAACPSLWSDVAAALRVSRLALGARISPDLKRQSQVRLVVGSHAWVEHAEGGVIYEFDVTRCMFSRGNVNERMRMGGLHCHGETVVDLYAGIGYFVIPFLARAGASFLHACEWNPNAVEALRRNLARNGVADRCEIHYGDNRSEALRERLRGVAHRINLGLIPSSEEGWPTAWAVLNAEKGGWAHVHGNVDGDTLADRTEWASHVAHAFEAGLSALHGRGWTARVGHVQRVKSYAPHIAHVVADIECRPVS* # ORIGINAL: g10077.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 6181 7287 . - . ID=g10077;Name=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 6181 7287 . - . ID=g10077.t1;Parent=g10077;Name=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 7232 7287 . - . ID=g10077.t1.exon1;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 7232 7287 . - 0 ID=cds.g10077.t1;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 6947 7059 . - . ID=g10077.t1.exon2;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 6947 7059 . - 1 ID=cds.g10077.t1;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 6706 6822 . - . ID=g10077.t1.exon3;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 6706 6822 . - 2 ID=cds.g10077.t1;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 6181 6581 . - . ID=g10077.t1.exon4;Parent=g10077.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 6181 6581 . - 2 ID=cds.g10077.t1;Parent=g10077.t1 #PROT g10077.t1 g10077 MSSDWTGDFCADTRPTPRSFSCSEPVPTACPSDPNEPCLDCMMGKQWVNAPYANVMGYASDTECTARGIDRHFTPQQHGRMRCYVDLYYQQWTHQANPAPVVFTPTAEVARDRSVNVTWFRSIRSGIASDLRYEVERTPAFSSSRNPVVADTQFVDVTAVPGVLYSYRVSSVTSAGRSQPSPPSKPVLLPPDAADDAQMWRKVFAEYRAELTKWETVNDGCNKGPLSV* # ORIGINAL: g10078.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 7338 9727 . - . ID=g10078;Name=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 7338 9727 . - . ID=g10078.t1;Parent=g10078;Name=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 9361 9727 . - . ID=g10078.t1.exon1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 9361 9727 . - 0 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 9077 9233 . - . ID=g10078.t1.exon2;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 9077 9233 . - 2 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 8791 8857 . - . ID=g10078.t1.exon3;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 8791 8857 . - 1 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 8332 8588 . - . ID=g10078.t1.exon4;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 8332 8588 . - 0 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 8002 8194 . - . ID=g10078.t1.exon5;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 8002 8194 . - 1 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 7761 7851 . - . ID=g10078.t1.exon6;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 7761 7851 . - 0 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 7513 7593 . - . ID=g10078.t1.exon7;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 7513 7593 . - 2 ID=cds.g10078.t1;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 7338 7363 . - . ID=g10078.t1.exon8;Parent=g10078.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 7338 7363 . - 2 ID=cds.g10078.t1;Parent=g10078.t1 #PROT g10078.t1 g10078 MHVPLCAKGGVVLATLFIALQVTASLAHSGGGPSDRPVRHDWCGTHTKSQQDAILMARRRRSVEKDADEDDELAALITTTPIQTELPSPKCWYNKGTLCDNPQMRDAYRTALEQERLESANIKLRVHIIADDDGENPILPDSDTQGQIALVNSFFVPVGLTFDYEISNVNMSRLRYGALLPSNICKPEQVGNGVFDIECMGAFSGFDGGDGTGVNAMCDDQELCDPTTCTYGAMTENPNNDCACVCAAIPEGHGRTCLKTAADGVCDPACNFNKYEWDRGDCCLTATAGTCRDPKSPHRNWLDRNELKEIINDSGSNHMNQFVSPFYIEPGVKVSTMGSATFPWEETVFTPLGGVIFSATVWGPGQYTAPHEYGHVLGLLHTHVGLSDSADIAKDLQSKGYFEPGTVCDAFR* # ORIGINAL: g10080.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 12020 12613 . + . ID=g10080;Name=g10080.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 12020 12613 . + . ID=g10080.t1;Parent=g10080;Name=g10080.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 12020 12613 . + . ID=g10080.t1.exon1;Parent=g10080.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 12020 12613 . + 0 ID=cds.g10080.t1;Parent=g10080.t1 #PROT g10080.t1 g10080 MPPKRTGSASPTSARKASAGKKKKAGDGRVQSASSRDVMPALPIDRLQWVRLNLRLVTWEHGNFSITVPALFTIGAVVKAIEERFEGTVAGIEVFRERLGDDNKLDENRTLEDHGLAGGPQNDPPQYTLVYDFPPNHTECPLLNVDGQMFIGSAASATQAPPSGLGVDKRRSFIARAMSNVSPHDAHAAKGDKTPLF* # ORIGINAL: g10082.t1 original gene structure, not modified by PASA NODE_281_length_28337_cov_42.1551 AUGUSTUS gene 17467 19278 . + . ID=g10082;Name=g10082.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS mRNA 17467 19278 . + . ID=g10082.t1;Parent=g10082;Name=g10082.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS exon 17467 19278 . + . ID=g10082.t1.exon1;Parent=g10082.t1 NODE_281_length_28337_cov_42.1551 AUGUSTUS CDS 17467 19278 . + 0 ID=cds.g10082.t1;Parent=g10082.t1 #PROT g10082.t1 g10082 MEWTAACREKQAPPRTILALPVEIVSTWILPHLEPSDVVSLRRVNASLRRCLRGAVIFRLRRRFSLRFITDDEFRAQVTIVPSSCLAVDLTNRGPPEDSVTSVFGVGGNGVTGSNLAICAPDSRWCDAADVIALKGLFSVNLSRWHDLTDVAFLAHVRDIDLSFCRNLRDVSPLRLAHTLRLNGCKSLSNVSELGGVHSLYLADCAGVRDVSALGHVYHLDLSGCVNVSDVSALGRVHSLDVSRCVRIADVSSLGRVHSLALAGCNAIRNVSALAHAHALDLTWCSGVDDVSALGKVHTLRLTRCLKLRDVSALGTVHTLILHGCDAISDVSALGGVHYLDLSNCNNIRDVSCLGQVHYLSLSECGGVVNASGLATVHSLILFNCVGILNVFMLGHVSVLNLAGCGVTDVSMLGRVHSLNLDWCRAVDDVSHLRHVHTLSLRGCTAVRDVSSLGNAHTLNLSGCWRVCDVSMLGRVHTLDLGCCSSISNISCLAKVWSLKLSGCVGVSEVSSLGGVHSLDISSCRAVLDVSALGHVHTLNLGHCDRITDVSMLTAVHTLDICGCVCVRDVSCLSRIHTLIVGSGIDARGVACLVDAGVCVLGC* # PASA_UPDATE: g12230.t1, single gene model update, valid-1, status:[pasa:asmbl_1456,status:12], valid-1 NODE_1397_length_11604_cov_42.5823 . gene 121 11198 . - . ID=g12230;Name=g12230.t1 NODE_1397_length_11604_cov_42.5823 . mRNA 121 11198 . - . ID=g12230.t1;Parent=g12230;Name=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 10934 11198 . - . ID=g12230.t1.exon1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 10934 11198 . - 0 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 10147 10715 . - . ID=g12230.t1.exon2;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 10147 10715 . - 2 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 9641 9871 . - . ID=g12230.t1.exon3;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 9641 9871 . - 0 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 7908 9462 . - . ID=g12230.t1.exon4;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 7908 9462 . - 0 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 7385 7694 . - . ID=g12230.t1.exon5;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 7385 7694 . - 2 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 1304 7191 . - . ID=g12230.t1.exon6;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 1304 7191 . - 1 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 826 1012 . - . ID=g12230.t1.exon7;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 826 1012 . - 2 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 412 468 . - . ID=g12230.t1.exon8;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 412 468 . - 1 ID=cds.g12230.t1;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . exon 121 240 . - . ID=g12230.t1.exon9;Parent=g12230.t1 NODE_1397_length_11604_cov_42.5823 . CDS 121 240 . - 1 ID=cds.g12230.t1;Parent=g12230.t1;3_prime_partial=true #PROT g12230.t1 g12230 MKCEKKGATTAVPGDLCVYPIDGNGNPNPCGTGTNGVGFERQWNPSMNWNGYFDFDAQAPNVPLAGACMHVSPMRMGSGSFAFTRNCRPVCYEFDSVGAVFSNGAFGGSNGMNYNNMPNGGSVAYDGYNLYPGLKAGFHPYDMRQSGCYNGICTDSANTCVCQDASRRGRRCDRAQPVFTLTVKDVLDAKTWIDPRTGAAKQLQYPDSSDSSAIHYWSTRPCMDPVERSVSVEMKGGSEKGLKYASIVDKGPEYPQHATANVRNGGGAFFRFDYFYDQDPRPGLSAANRLVVKPKALCSKDSSRPLDYCDSSPIVLCDGNAVDSCVFNMGSAASFDADSTVDLRGDPADGRRPNAYYHVTTVDEILTIAPGNYSGCGGMRPSFDNGAVNNDPKTRCTVFDATVTMTINEALPQYRLSTRKRFFMHFDVTRPLPIDADKVSDVFNTKNTLSRWISGPSCQTFAQDGSKNFCGDDDLRCRCTSLASNNPASLRWPWEFFLNTGPWYDPELPIDNVNIQIYKDGLDSGSVIFRKSLKWPAGTSTTVVINDATQAASYPESGHRYLFMLQVFNLAGNLRRALFTVGVDVTPPILRGGDVCRVGNNETIVPTPWRAGAFSDPCSKVEVPALNTYQGEDWNYRYQVQFVRKLPATKDTEPPGFTQPNHYQIGAQEKFYQRRNDKLDVRFNYVFLEPDSNVLAPFSVQDDTLLNTKTDYDRPGGTLFSSNTDLNPLAIVNKASSDGTTTGIFRVEYTVTARTGPLATSPLAVGATDTYQVLDDPDYVAPRSAGYLRTFETVFAVSSSRPLTNGVWYHLNIRAANYFNQRSVEASQAVLVDVARPSVSTLVIGSDKYAGWTHNGISFQQKLRGTEIWLWMQDKESGIGTGSWPSIEWRICRTSQPLECTSVSADVQRLSRVTELPTRLQVGSFGPGVPGDGFQHDCARTCPSNGIGYDKNGFSCLRRLDAYDASSCAALCAADACTVESRNELHRQFLKVDTKALKSTSESMDMQTFQEFHMAVYQITVTVNDRAGWWTQSTADLTLDLTPPEPGFVADVERSDMVQDIDMQTEPVLYSYWLGFHDRESGIHHYEHGIGTPCVDGPPADKKGLADYFDCSLCPFGKLVVVDTATGHKHGDKNPNRATKDVCPATLCLVREMRPSTDGAEVAQDTNDLNEFRATRAKVDLEHETPMSGVTATIDASVIQYMAQQQWGVAAATQLTRFNRRFHSIVRAYSGTAETIVACSDGITLNRGTKPELYDVRVTNVVVGPDSNDYLSTTNGDGRLRIDCEWKYNDPNAKLAYFRVGLGAARGYTQALNRFSWTEGVLSTTLTIFKEPYVDLGEDFVLNVVAVNTAGIETFASSDPVIVDLTPPSPVFIDVQQVDGRVEVSWGTAVEPVGGIAEYRWAIGTTPERMQIKNFTRAPDGHANNDVIRDCGASRRCVVTVDAATMARMYDGVRYYFGVRAVNYAGLESISWKGDSFLLDRSPPLAGDVLEVTSSISFADIDSYEKSAVLFVRWRGFHDPHSDIADYRIAVGTAQGGVNSTNILDFNRGNPECNLRGGTLNCDLYRLFPNAIVPDLVKGQMYYVTVRAVNGRGLAAVATSDGFRVLTDLPMKVNVTVLSAASSATYLSSDRQYGFQATTSSIEATWSDISGLSEFGYYKWLVLLTQDASPAAPLFLAKVVGSGLISGADGDDIDDSFFRTCGALPRLSVGQLNLSPGDEFRVLVRACNTADSCVQSVSLNMVVDSTPPTGSVADASFKYEVDIVKGVFAFQLAWSVFVDGETPIVGYQWSVSTDATGAALVLPWQNVTGSLTPPGGRFSLTPSVPRRTAHTTSLFIVVRATNAAGLSGRITKAATFLSLAVVTSSPFVLDATPVVRTGTAFVTTVSTDIDIDYTASSTRLAARWGGFPRNTIAYSVEWSAGDEAHPSLVGGTPTYDSLQRFTPLLPLPLVPIETTYANWITSTGWQPTPGPRLETAIYILNVTNVRDIYNQSFPVIKEVGPYVYLRKETRLNTAINGRDISFVRMVQHTPVGAGVSGSRDDLEKVTVINPSYFRFVYSFTGKTRELVALQYLIRVAVGYHISAVRDPIVTGYSQLTQAARDRVAGDGAAPTPADVLWVQMANVNVVKEITGNLTLVSEYVPRMYDLPMLEIGAYMRLHRPASWVNASDPDYLDLPIALVKNIYALLSSQTLLESFFSATIVTEGSVDAAPIGADGSSAASADLPVVAASLLQYPPLNTSADAPRIMALVADFALYVGSSVLERNDGDAFVTRTVRELALPESDKLFSRIAEMDPTAILPKVSGILVNHKTEADALADGVGPDVLFTGTGGVDEINFIVRWRGSEGFSSGATVLPFDGYEGTQFPPGLRNSTWTSLSPRAPRYTVFHPELSRPMDIVYTNRNVISGGVTLNHFEADTAGFMRGDNTTGRDFGIFVDGVQNMDGVFGYPAFASNPHFLHAANGTEVLKNIHGLSPNTARHASFFDVEPTTGRVMASARRVMISVGLESDNVLLRGTAALRDGLTLVPFYWTEARSSVPVDVLVAFKASLSLSVAASTRRLSPSTANVTAPLNVTTAPLMPGDTTIPSSANVDVPSYVVSDVLRLLEGFRYRVCFRGRVGSLDSEYLYACSNGLYVDTTPPQAGIVCDGTRTCNSPADDLDFQVSTTELIASWRGFDDREEGAGTHVSGIMYYEWSAGSSPGGVDLFPARNVGAVTSAVASTYGKDFSVPMTNGQMCYVSVRALDFVGLATTVYSDGIVVDGTPPTAGPLTVAKLTGEYSTSSAELSVSWTGLDDAESGIRRIEWAIGSLPGMADVIPFTETTSLEAVTADGLGDEVHQGHTYFVSIRGTNFAGLHTTFSSGPVTLDSSPPLIGTVSDGKRAAGSDDINYQSSRAELGVFWDDFKDPESGIAYFEVAVGTLSNEADEHEFVTVPLNGGDLATAFVQQGLRLIDGHVYYSVLRVCNRAGACVQASTNGVLVDGSAPVLGRVLDGFEDTDRVYQPEGSMIAAHWYGFHDPHSSIERYEWCPTADRVTCLNTVAGPQAVGLATSVLDTEAILENGK # ORIGINAL: g14311.t1 original gene structure, not modified by PASA NODE_1926_length_8499_cov_40.1157 AUGUSTUS gene 4601 5284 . - . ID=g14311;Name=g14311.t1 NODE_1926_length_8499_cov_40.1157 AUGUSTUS mRNA 4601 5284 . - . ID=g14311.t1;Parent=g14311;Name=g14311.t1 NODE_1926_length_8499_cov_40.1157 AUGUSTUS exon 4601 5284 . - . ID=g14311.t1.exon1;Parent=g14311.t1 NODE_1926_length_8499_cov_40.1157 AUGUSTUS CDS 4601 5284 . - 0 ID=cds.g14311.t1;Parent=g14311.t1 #PROT g14311.t1 g14311 MRCADVKSIALQAAVAVVAICMFASSPAKGAAVQLVGPAYAQSFKMYTYYSALTNYGFSNSTATAQAVLRFIPDLGIAQLNLETNGFASNTTILGIHVHFPTVNQAITNIMIMFCDTEPFPLSSNTVCSSTPNTNATYFGVPFAPSTWATIQANEPNGLSWPPNVFYLNIHTNIEFNATAPSPNLEGIIRGPLVLFQESTFNSAGQTTVGMATAAAALLVTFAALFF* # PASA_UPDATE: g14312.t1, single gene model update, valid-1, status:[pasa:asmbl_3028,status:12], valid-1 NODE_1926_length_8499_cov_40.1157 . gene 6368 8399 . - . ID=g14312;Name=g14312.t1 NODE_1926_length_8499_cov_40.1157 . mRNA 6368 8399 . - . ID=g14312.t1;Parent=g14312;Name=g14312.t1 NODE_1926_length_8499_cov_40.1157 . five_prime_UTR 8278 8399 . - . ID=g14312.t1.utr5p1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . exon 8236 8399 . - . ID=g14312.t1.exon1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . CDS 8236 8277 . - 0 ID=cds.g14312.t1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . exon 7789 7923 . - . ID=g14312.t1.exon2;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . CDS 7789 7923 . - 0 ID=cds.g14312.t1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . exon 6887 7321 . - . ID=g14312.t1.exon3;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . CDS 6887 7321 . - 0 ID=cds.g14312.t1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . exon 6368 6732 . - . ID=g14312.t1.exon4;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . CDS 6484 6732 . - 0 ID=cds.g14312.t1;Parent=g14312.t1 NODE_1926_length_8499_cov_40.1157 . three_prime_UTR 6368 6483 . - . ID=g14312.t1.utr3p1;Parent=g14312.t1 #PROT g14312.t1 g14312 MKDIEPVTVTPFQKGAGGGDMEDEDDLDIPPPVPKRPPAASVSSFGSLRFLSRATEAPQRPELPAPPLPHASRLRMARNGPTAFPASPSLVRAQLHHSNSLTQLIGPGGVRSTQAAQPVQTQSAPAQQYRTSDTDDLAYLPDPGSGTSLRTSFTSDGDASSRKSSDNDAVPRKLSSTAAPSEYEMPTRRSPAQPVQPPRNANPMYFDPNQSLPAPPAQTMPYMEAGGFDRNQALPPAPLSSSPSTPIQMRAVPSGITESLVTCPVCQRQMSESLINPHLDQCAQLH* # PASA_UPDATE: g14310.t1, single gene model update, valid-1, status:[pasa:asmbl_3029,status:12], valid-1 NODE_1926_length_8499_cov_40.1157 . gene 196 3241 . + . ID=g14310;Name=g14310.t1 NODE_1926_length_8499_cov_40.1157 . mRNA 196 3241 . + . ID=g14310.t1;Parent=g14310;Name=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 196 312 . + . ID=g14310.t1.exon1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 196 312 . + 0 ID=cds.g14310.t1;Parent=g14310.t1;5_prime_partial=true NODE_1926_length_8499_cov_40.1157 . exon 557 700 . + . ID=g14310.t1.exon2;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 557 700 . + 0 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 848 928 . + . ID=g14310.t1.exon3;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 848 928 . + 0 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 1171 1454 . + . ID=g14310.t1.exon4;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 1171 1454 . + 0 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 1784 1913 . + . ID=g14310.t1.exon5;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 1784 1913 . + 1 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 2122 2219 . + . ID=g14310.t1.exon6;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 2122 2219 . + 0 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 2442 2602 . + . ID=g14310.t1.exon7;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 2442 2602 . + 1 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . exon 3077 3241 . + . ID=g14310.t1.exon8;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . CDS 3077 3213 . + 2 ID=cds.g14310.t1;Parent=g14310.t1 NODE_1926_length_8499_cov_40.1157 . three_prime_UTR 3214 3241 . + . ID=g14310.t1.utr3p1;Parent=g14310.t1 #PROT g14310.t1 g14310 LSSEELGDFGGSPVPIPPGLGGTPDKKTRELTPLFAQMMKSVTGGATSNNAISTQDYKNYLRAQNTDYLGVLFHLYDSDSSDSEVSSAEELADDHTEIEARELERLERDVRKQKHAYVKGMWNVRVISLGGLGKDPDVRWYKEWLDEHSTVPDGPPPSVATRASTVYSATTDADSRATSAVTDATGASAGTEGEHEPKNPDHVPASRDKEQQAMSLQRRLESICVKLRMPPLIKLDMIIKYSCDIYSLKLEHAITLWENSVSAIMKRERLLGTLERFEFSASNPKRFFEKGYAGSSEARMEEARYREKLKAQLKALDRKVLRSVDSIAERLDDVVTFGGRPYAAKMTTDYTEMLYWLQQERLVSTEQPKYERNLAPLSAEQLL* # PASA_UPDATE: g858.t1, single gene model update, valid-1, status:[pasa:asmbl_5695,status:12], valid-1 NODE_3195_length_4048_cov_39.7619 . gene 2846 3906 . + . ID=g858;Name=g858.t1 NODE_3195_length_4048_cov_39.7619 . mRNA 2846 3906 . + . ID=g858.t1;Parent=g858;Name=g858.t1 NODE_3195_length_4048_cov_39.7619 . five_prime_UTR 2846 3023 . + . ID=g858.t1.utr5p1;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . exon 2846 3182 . + . ID=g858.t1.exon1;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . CDS 3024 3182 . + 0 ID=cds.g858.t1;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . exon 3353 3429 . + . ID=g858.t1.exon2;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . CDS 3353 3429 . + 0 ID=cds.g858.t1;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . exon 3720 3906 . + . ID=g858.t1.exon3;Parent=g858.t1 NODE_3195_length_4048_cov_39.7619 . CDS 3720 3906 . + 1 ID=cds.g858.t1;Parent=g858.t1 #PROT g858.t1 g858 MPMPKSYLKFVPIARFGVVASLQSNVQYDPQTQTIASPALEDVVLWNVRTGDKTRVLRGDKHEVTCLARSPDSRSLAVGYSDGSIKIWNTADGTNTVTFNGHTSAVTALCYDPSGAVLASGARDTDVVMWDVISESGLYR* # PASA_UPDATE: g857.t1, single gene model update, valid-1, status:[pasa:asmbl_5696,status:12], valid-1 NODE_3195_length_4048_cov_39.7619 . gene 344 2462 . - . ID=g857;Name=g857.t1 NODE_3195_length_4048_cov_39.7619 . mRNA 344 2462 . - . ID=g857.t1;Parent=g857;Name=g857.t1 NODE_3195_length_4048_cov_39.7619 . five_prime_UTR 2386 2462 . - . ID=g857.t1.utr5p1;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . exon 1777 2462 . - . ID=g857.t1.exon1;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . CDS 1777 2385 . - 0 ID=cds.g857.t1;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . exon 1069 1181 . - . ID=g857.t1.exon2;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . CDS 1069 1181 . - 0 ID=cds.g857.t1;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . exon 344 674 . - . ID=g857.t1.exon3;Parent=g857.t1 NODE_3195_length_4048_cov_39.7619 . CDS 344 674 . - 1 ID=cds.g857.t1;Parent=g857.t1 #PROT g857.t1 g857 MPIVATMSLSLGAGAPPATVTIEEVQARIDALSVNDDNERTLQKAIRKEAKDLDQSLDACTSVESKFDTVYRQLVPLMAEHKRLERDLLQSKRQQEHVTKERDAAVADLARANAAKAKLEQLCRELQKQSKSIKDETKRLTDAEQTKRDELSAKFQKTIGEITERMDKDTEARHQQAKEHEELRGKFQSYMEQYDLREQYFEKVLKSKELEFKLSEAKLDQQARMTMQEQTTCKHLRDQNSILAKSESDLKSQLATYAERFEQFQETVKRSNELFGAFREEMDRMTKTTKKLEKDNASLKQTVDKANVTILEFVEEKERWVCTTWMPSWKILSVASALQFVGLTLLLRAL* # PASA_UPDATE: g14161.t1, single gene model update, valid-1, status:[pasa:asmbl_3919,status:12], valid-1 NODE_2277_length_6943_cov_22.0878 . gene 171 862 . - . ID=g14161;Name=g14161.t1 NODE_2277_length_6943_cov_22.0878 . mRNA 171 862 . - . ID=g14161.t1;Parent=g14161;Name=g14161.t1 NODE_2277_length_6943_cov_22.0878 . five_prime_UTR 824 862 . - . ID=g14161.t1.utr5p1;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . five_prime_UTR 617 620 . - . ID=g14161.t1.utr5p2;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . exon 824 862 . - . ID=g14161.t1.exon1;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . exon 539 620 . - . ID=g14161.t1.exon2;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . CDS 539 616 . - 0 ID=cds.g14161.t1;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . exon 171 344 . - . ID=g14161.t1.exon3;Parent=g14161.t1 NODE_2277_length_6943_cov_22.0878 . CDS 171 344 . - 0 ID=cds.g14161.t1;Parent=g14161.t1 #PROT g14161.t1 g14161 MNAEKLAKLQADVRIGGKGTPRRKKKVVHKTSGADDKKLQSTLKKFGLNVIPGIEEVTMFRDDGKIVQITSPKGASLVPSTAF* # PASA_UPDATE: g14162.t1, single gene model update, valid-1, status:[pasa:asmbl_3921,status:12],[pasa:asmbl_3922,status:12], valid-1 NODE_2277_length_6943_cov_22.0878 . gene 1648 5540 . + . ID=g14162;Name=g14162.t1 NODE_2277_length_6943_cov_22.0878 . mRNA 1648 5540 . + . ID=g14162.t1;Parent=g14162;Name=g14162.t1 NODE_2277_length_6943_cov_22.0878 . five_prime_UTR 1648 1710 . + . ID=g14162.t1.utr5p1;Parent=g14162.t1 NODE_2277_length_6943_cov_22.0878 . five_prime_UTR 1862 1866 . + . ID=g14162.t1.utr5p2;Parent=g14162.t1 NODE_2277_length_6943_cov_22.0878 . exon 1648 1710 . + . ID=g14162.t1.exon1;Parent=g14162.t1 NODE_2277_length_6943_cov_22.0878 . exon 1862 5540 . + . ID=g14162.t1.exon2;Parent=g14162.t1 NODE_2277_length_6943_cov_22.0878 . CDS 1867 5307 . + 0 ID=cds.g14162.t1;Parent=g14162.t1 NODE_2277_length_6943_cov_22.0878 . three_prime_UTR 5308 5540 . + . ID=g14162.t1.utr3p1;Parent=g14162.t1 #PROT g14162.t1 g14162 MGCTKFRIGVATTVCGVIGIIAGLVIGLVLPQVVQTTVNDGIVCPQSEYDDCYSRWYTNNEDVRPITGSEHDPTRQYNDVYMFNITNKDEAMVGKPIVLSQVGPYRYRLVYKYYNALWDYTLDTLTYKEFRQMIPDDASDPVGPMITQLSPTALRATFTGLSQFLNSQLLPQLNQNPASSCFGLTDTDVKTPAGLREWDTVYQKKIFCNKEMMLRYNTLLSSPIVKATLKTYGGDFFVALSSFLPKIIKGLFSKLSGALMAKAQGTILDNIPTLLVGAFVTITNSADATLLSTYLFQYDVLPLYNQELPSFIGTNMTGTAIDRYTNITASSTCGSDPTKWLGLPGCSAVVTAAYVKTGASNIVKYCQLSASAPNTYDMCPNLGSVPLTNQQCCLNLIRTNPGLLNKLRDTALTAVATGIDALIPGQNKTQLIVTAAATFLNTAPGAVNSLIPIDFSPLSSTAKKFFASDLIDLSDTAPSSANSTLVNSVMADYSVPSYYPGDPTGQAYFSTSLVALFMGAIRASINSELKKQIALELPNTPITWPTLLVATPAQVSVPRLMAYQLATGGLTDVTTYPVSKAQTGTSINSPLYNLGFLSLPDAQALLAVGRNINRGAADLYLPFPPNFVKFEFGLRFPTAFNFADNNAGLAKVYSVYKLLLNEKAHLVLPKLGQFLSMDATSQANETIAQPFIATYLAVTGYNVTAADAAPFFSMVHKYLYSDLTPILRDWLYSGPGREFGLYVSRPVSDWARGLKSDIYEGATGLIGYCQPGFLTHHTGINPTDSQAKLSANQQGGCISPSEGGNDADPNNKPNSNQYSYYTGKQDISKIWSYAGIGISDRTAKTSTNVEFWRLVNYWYYPKVAANATGGVDLLRIEGHSGTQFMPAKKTYILHKLTEPRVNEYEVFVTQANRHLRLVYDGNTKVKGITINVFRADKNILNSDNLLNPYFFEPILVNGVAKIVNGLQTTIDSRGFPSWISRPYFTYGDIDTLLEPFPALKAKLLADGNEEYDTWLGIEPITGATMQARKKLQGNIGVMQGMFSDYAMYNGNVSAALYNRPIPFYWVNEWADIPDPKASAFKHKVYVTSDLAYAALIAGPLVGGLMTIVGIFLIVSSRNQRLGGTESQAAFVKNGGSFEVANPIYAH* # PASA_UPDATE: g5522.t1, single gene model update, valid-1, status:[pasa:asmbl_2556,status:12], valid-1 NODE_1763_length_9337_cov_39.8444 . gene 5697 6760 . + . ID=g5522;Name=g5522.t1 NODE_1763_length_9337_cov_39.8444 . mRNA 5697 6760 . + . ID=g5522.t1;Parent=g5522;Name=g5522.t1 NODE_1763_length_9337_cov_39.8444 . five_prime_UTR 5697 5751 . + . ID=g5522.t1.utr5p1;Parent=g5522.t1 NODE_1763_length_9337_cov_39.8444 . exon 5697 6243 . + . ID=g5522.t1.exon1;Parent=g5522.t1 NODE_1763_length_9337_cov_39.8444 . CDS 5752 6243 . + 0 ID=cds.g5522.t1;Parent=g5522.t1 NODE_1763_length_9337_cov_39.8444 . exon 6505 6760 . + . ID=g5522.t1.exon2;Parent=g5522.t1 NODE_1763_length_9337_cov_39.8444 . CDS 6505 6726 . + 0 ID=cds.g5522.t1;Parent=g5522.t1 NODE_1763_length_9337_cov_39.8444 . three_prime_UTR 6727 6760 . + . ID=g5522.t1.utr3p1;Parent=g5522.t1 #PROT g5522.t1 g5522 MDAPPPHAATRPLVPLSFTFVQYRDGDSVGRLLAYACLSPMVILVALATLILFRRELRTASFLAGIVLSEGINYVLKNVIKHPRPSPDDTAHADGPSHHFTQYGMPSSHAQFMGFFAAYVVAFVYHRVSFRHAVWRHLLALAAIASALAVCAGRVHLHYHTLNQVIIGGTVGTTLGLLWYAFTESHVSRLFPLIERLPIAEYFYVKDSSHIANVFLFEYLNSRAKSRNVRRIARKEN* # ORIGINAL: g5519.t1 original gene structure, not modified by PASA NODE_1763_length_9337_cov_39.8444 AUGUSTUS gene 76 281 . - . ID=g5519;Name=g5519.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS mRNA 76 281 . - . ID=g5519.t1;Parent=g5519;Name=g5519.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 76 281 . - . ID=g5519.t1.exon1;Parent=g5519.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 76 281 . - 0 ID=cds.g5519.t1;Parent=g5519.t1 #PROT g5519.t1 g5519 MALVSVRDVSVRIQCTCGDLSQGIESLYYCDGCAAIRCQRCAAHEIDWLFCTNCFETVKPVEARFTKN # ORIGINAL: g5520.t1 original gene structure, not modified by PASA NODE_1763_length_9337_cov_39.8444 AUGUSTUS gene 615 2799 . + . ID=g5520;Name=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS mRNA 615 2799 . + . ID=g5520.t1;Parent=g5520;Name=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 615 1088 . + . ID=g5520.t1.exon1;Parent=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 615 1088 . + 0 ID=cds.g5520.t1;Parent=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 1531 2074 . + . ID=g5520.t1.exon2;Parent=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 1531 2074 . + 0 ID=cds.g5520.t1;Parent=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 2396 2799 . + . ID=g5520.t1.exon3;Parent=g5520.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 2396 2799 . + 2 ID=cds.g5520.t1;Parent=g5520.t1 #PROT g5520.t1 g5520 MAGSVDLASADALASAIERLLTPASCRSGAVASGGVDPLRGGCLHTCVPVVSKCIPQSPLQLEQSDVVVVSVFIACAVHRSPVGTTAGDALATTDDGVGDCAYAAVSSFKPNGVDMFIKVVDVPQLRARMHKSDDKWRISVRSFLNEAAFYEFLPVNQLIHSGVHIPRIYGSELTRDASHGEFGVRITTALEYFPPSHYVQSDVLNVSQARAALDFLGRFHAHFWHSPPVSPGPCGSVQWNAPDELSGHLFARGGWWRKALRPSVRFDRIPDAFRQLCGAFPGELSSVNLPDIHERMQRLCAAVPDVHAAIDTAHTTTVIHGDFKTSNLFFDRAGRGDVAVIDFQWSGMASSGAGDVVYLLYGGVDATVLSLLHDELVESYLSAFDAALVRRGVDAADRAGARNQFTRLYDLEFLDYFTTALPQLMGDLSHDVCAANRGKYGWLTHEFDPRVVTMFVRRAVDTAAKLDVILGK* # ORIGINAL: g5523.t1 original gene structure, not modified by PASA NODE_1763_length_9337_cov_39.8444 AUGUSTUS gene 7200 9212 . + . ID=g5523;Name=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS mRNA 7200 9212 . + . ID=g5523.t1;Parent=g5523;Name=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 7200 7402 . + . ID=g5523.t1.exon1;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 7200 7402 . + 0 ID=cds.g5523.t1;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 7533 7679 . + . ID=g5523.t1.exon2;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 7533 7679 . + 1 ID=cds.g5523.t1;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 7958 9077 . + . ID=g5523.t1.exon3;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 7958 9077 . + 1 ID=cds.g5523.t1;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 9159 9212 . + . ID=g5523.t1.exon4;Parent=g5523.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 9159 9212 . + 0 ID=cds.g5523.t1;Parent=g5523.t1 #PROT g5523.t1 g5523 MSRVRTVALVVFVLSVVCLSTAAAQGRLQRDALPPVPKLVPVTRTLHGDAVVDEFSWLDDVTDPDTLTYIADEKKYADAILSHTTDVRTTLVEELASLAGPYSMELDIVIQNYIFTRVSSSEGAYSVWRRRLGDDDEQIILDENKLAKGKAYFHLGGVSISPDARLLAYACDTVGSGHYDIHIYNMDTNEILADLPNAHTSMAWSQDSTFLLYTSMDVVAHQPVRLYAHPVDAKNADADTLVHEETDLTYRLELSTSASSEYIVLYRRGLTGSDALLISWTDVKSAQISTWAVSHTPTLSIEHVDGIFYLLTGGKDGDGCDNGCVYAINPHPAEGDSGIVLVHKDPSVCVHSIAAYATHLGAFAIDIKSTAAHVRIMNHGTPGEWLTVPLRADYQWGYIGPWGERYPAASNTPKARYEAPRVFFSASGLVLPDTVLMLDENGESASVFEPGSARGHNPADFVARRLFVPPTEGGTPDEATDIPVTVAYSKNAQTLTSFLVGGRVVRQ* # ORIGINAL: g5521.t1 original gene structure, not modified by PASA NODE_1763_length_9337_cov_39.8444 AUGUSTUS gene 3223 5392 . - . ID=g5521;Name=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS mRNA 3223 5392 . - . ID=g5521.t1;Parent=g5521;Name=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 5153 5392 . - . ID=g5521.t1.exon1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 5153 5392 . - 0 ID=cds.g5521.t1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 4962 5049 . - . ID=g5521.t1.exon2;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 4962 5049 . - 0 ID=cds.g5521.t1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 4264 4599 . - . ID=g5521.t1.exon3;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 4264 4599 . - 2 ID=cds.g5521.t1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 3988 4082 . - . ID=g5521.t1.exon4;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 3988 4082 . - 2 ID=cds.g5521.t1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 3631 3783 . - . ID=g5521.t1.exon5;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 3631 3783 . - 0 ID=cds.g5521.t1;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS exon 3223 3393 . - . ID=g5521.t1.exon6;Parent=g5521.t1 NODE_1763_length_9337_cov_39.8444 AUGUSTUS CDS 3223 3393 . - 0 ID=cds.g5521.t1;Parent=g5521.t1 #PROT g5521.t1 g5521 MGDVDVDPCGGVSDTKALPAVSRHHHVTDAQLAHDPSILATRHVRPRDDDSGDHDGMDKAPAKVPRVDPAIVQITASKAEIDKRISAFVERKQLEKDKSNRVEFCRPPGVDGITCARLDAIMHRLLGRRTGHMKVSYVRNTHGPSMPQPPQPNPTVQHLQQQQQQPRMPHYGPSGAGASSTRASVGTAVASMDGGRAQSAPLPTSVAERFINLESHLGIGVGLPPDVYQRLRRLEDRMLELESCSPELFMHNMVQTQQPTTLPHHQQQHEQQQQQQQWTMSRGQPSLDAGQSPPPPQPPPKTSKYESESLDVIERRIAELTDSLQRKAQSKATIKTDAPRCDDTTQRNVVESGVAMETHE* # ORIGINAL: g8634.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 36359 38424 . - . ID=g8634;Name=g8634.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 36359 38424 . - . ID=g8634.t1;Parent=g8634;Name=g8634.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 38245 38424 . - . ID=g8634.t1.exon1;Parent=g8634.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 38245 38424 . - 0 ID=cds.g8634.t1;Parent=g8634.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 36359 38062 . - . ID=g8634.t1.exon2;Parent=g8634.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 36359 38062 . - 0 ID=cds.g8634.t1;Parent=g8634.t1 #PROT g8634.t1 g8634 MADLNDYIRSRGKRQWSPCEPICSIEDDHLESIRRIASARLNTLGIRGVPLSYGVDSTDTTTLFGSTISFALRREAVEIDGGAIPSVVHNVLARLEPFIAERGFARKCGLRSRIQVATAWMESGAHTDPPSNLNTHDVMDAFKGYLRSLREPVVPEALYPHFVQVAQILNDESLVQADGSKVTWTVAERRTEAALLLTLFLPRENLALLRHVMRFFRRAVDAQLAMKDVANTNEVMGFLAMSNILSACLFRTKDVAASVGRDLATSLPFAIMPLLESAEHVGTAPNALAVLAYAYAEELHSMCGPGGYRAVAQHHAGAAVLATAAASPGGYIGRITRSRASLARTHSPAGSPSTGTHAADTHHSGSGSNTKKRPITAIADAFERSGKKFRRSIDAIQSRMSPSIQRKNSTASSAAPPSSSGADGLQRAPSVSSLKPAPQAQIPALSHVARGDVGRATAAATGVAPDMAKSAFRAAVKQGQEKRKAAETSDENAAAAANAAMAYTASADSYEEKGEKPQRRASLKRRLSDMGKQFLHNISGGSSGTTKAPSTNLPTNYSYANLPGSGMCSHPPSPSPVGRTASYVDMNTRNSVMPMDFDYGGDDNESIARNCFFDSNGMLIESHESTV* # ORIGINAL: g8643.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 66133 69192 . - . ID=g8643;Name=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 66133 69192 . - . ID=g8643.t1;Parent=g8643;Name=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 69098 69192 . - . ID=g8643.t1.exon1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 69098 69192 . - 0 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 68737 68768 . - . ID=g8643.t1.exon2;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 68737 68768 . - 1 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 68527 68601 . - . ID=g8643.t1.exon3;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 68527 68601 . - 2 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 68204 68316 . - . ID=g8643.t1.exon4;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 68204 68316 . - 2 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 67814 67872 . - . ID=g8643.t1.exon5;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 67814 67872 . - 0 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 67327 67539 . - . ID=g8643.t1.exon6;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 67327 67539 . - 1 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 66585 66786 . - . ID=g8643.t1.exon7;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 66585 66786 . - 1 ID=cds.g8643.t1;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 66133 66405 . - . ID=g8643.t1.exon8;Parent=g8643.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 66133 66405 . - 0 ID=cds.g8643.t1;Parent=g8643.t1 #PROT g8643.t1 g8643 MLSVSSLSLLLLSVVAAVFGKGRFWRVVFQAAYGLYVGRLGYLYHLRNLRVLKGGKPAVTVPPAVYGDVEVHPLSILRDNYAYVIIDKAEKIAIAVDPADPDAVLDFVNSRSLRLVALLTTHRHWDHSGGNEVLAKRVEGLDVYGSAADGIPALTKALGHGELVRLGGSINVRAYLSAGHTAGHVMYILHPGAGHRLSIFTGDALFVAGCGKCFEGSAAEMHLSLERLKLILPVDTHVWPGHEYALNNLLFASAVDHDNRAVVEKLRQAGECADQHVGCVPSTFAEECLYNPFLRAADPHFAQLFTRPSGPALSPADVFAELRRLKDKFNPRKALTFPVNAVNAGTTASGSRV* # ORIGINAL: g8644.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 69820 73059 . - . ID=g8644;Name=g8644.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 69820 73059 . - . ID=g8644.t1;Parent=g8644;Name=g8644.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 69820 73059 . - . ID=g8644.t1.exon1;Parent=g8644.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 69820 73059 . - 0 ID=cds.g8644.t1;Parent=g8644.t1 #PROT g8644.t1 g8644 MSVLVGLEPYLTRTVEPGELLRIGIIARDADGRDRGCGGDSIQVRISGPSFYAGQAVDNLDGTYTFTAKLLDEGDYTVQVRLDFRRCEGSALCRSDNNNMTLIGEYIGMQRGQWPGGAAADIRVRRSPNGTLPPGALMSGNHGVVGFGDGHGSCGARFTADTAIHDPDMMVGRWYNRSLLCGAPSPPLPQTPQGQVPSSLSPGGRDRRRCDSPFFSGEYIWVPVDADRPVMPVAMCSNVWLHFIGDSLTRNTYLRLADILAEALGPATESVCFILRYHGNDSLPRVIRQSCTTYPEYGGDHTLWLRWRHWASQNITITNSWLMPWTRFTPLPSFLEWHVLPVDGRPLANATLMSPFPSDTSRVPTHVFTNAGLHHVCGPPEWIDSYDVYVADLLTRLHLDFPSPRTAHFWTATAQTQFVQHKLPEFHRCATSDRIRAFADIAADMAIVANVTLVWDYFQFSAGRHDATRDNRHYNADVMSFMVDEILNMVCVCHAKTFPSTTIHTTNSVSDISRPSHSAMFTSEPQQHLSVSTRAAPSLPSASTAPTASISTARPWIAAFQYCKHAPPCVTRGPPTSSSMSVLVGLEPYLTRTVEPGELLRIGIIARDADGRDRGCGGDSIQVRISGPSFYAGQAVDNLDGTYTFTAKLLDEGDYTVQVRLDFRRCEGSALCRSDNNNMTLIGEYIGMQRGQWPGGAAADIRVRRSPNGTLPPGALMSGNHGVVGFGDGHGSCGARFTADTAIHDPDMMVGRWYNRSLLCGAPSPPLPQTPQGQVPSSLSPGGRDRRRCDSPFFSGEYIWVPVDADRPVMPVAMCSNVWLHFIGDSLTRNTYLRLADILAEALGPATESVCFILRYHGNDSLPRVIRQSCTTYPEYGGDHTLWLRWRHWASQNITITNSWLMPWTRFTPLPSFLEWHVLPVDGRPLANATLMSPFPSDTSRVPTHVFTNTGLHHVCGPPEWIDSYDVYVADLLTRLHLDFPSPRTAHFWTATAQTQFVQHKLPEFHRCATSDRIRAFADIAADMAIVANVTLVWDYFQFSAGRHDATRDNRHYNADVTSFMVDEILNMACVCPMRREAL* # PASA_UPDATE: g8631.t1, single gene model update, valid-1, status:[pasa:asmbl_8951,status:12], valid-1 NODE_6_length_79858_cov_50.7929 . gene 21435 23106 . + . ID=g8631;Name=g8631.t1 NODE_6_length_79858_cov_50.7929 . mRNA 21435 23106 . + . ID=g8631.t1;Parent=g8631;Name=g8631.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 21435 21496 . + . ID=g8631.t1.utr5p1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . exon 21435 21729 . + . ID=g8631.t1.exon1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . CDS 21497 21729 . + 0 ID=cds.g8631.t1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . exon 22133 22230 . + . ID=g8631.t1.exon2;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . CDS 22133 22230 . + 1 ID=cds.g8631.t1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . exon 22380 22424 . + . ID=g8631.t1.exon3;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . CDS 22380 22424 . + 2 ID=cds.g8631.t1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . exon 22659 22715 . + . ID=g8631.t1.exon4;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . CDS 22659 22715 . + 2 ID=cds.g8631.t1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . exon 22993 23106 . + . ID=g8631.t1.exon5;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . CDS 22993 23060 . + 2 ID=cds.g8631.t1;Parent=g8631.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 23061 23106 . + . ID=g8631.t1.utr3p1;Parent=g8631.t1 #PROT g8631.t1 g8631 MLSEVRVSPAEVQSWLQRAKEWRANHLQDIRPAKEFFDVKSFSKPATAAETASRLNSNIRKFRTNYVLVTFGLFAYCLITSPSLLFAVIILSALGLYISIRGPDAPLAVAGQQFSQQQMYFGLLLLGLPLLYMASAGTIVFWVIGASISLILLHAVMFNSPSSSLV* # ORIGINAL: g8635.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 39944 40628 . - . ID=g8635;Name=g8635.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 39944 40628 . - . ID=g8635.t1;Parent=g8635;Name=g8635.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 40626 40628 . - . ID=g8635.t1.exon1;Parent=g8635.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 40626 40628 . - 0 ID=cds.g8635.t1;Parent=g8635.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 39944 40525 . - . ID=g8635.t1.exon2;Parent=g8635.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 39944 40525 . - 0 ID=cds.g8635.t1;Parent=g8635.t1 #PROT g8635.t1 g8635 MGKPALKAKPKDKNAKKTTAIHPNSREARRLHRGLVRGAKLARQKSDHSAAVIAFGKRVMWFKDNLPADRDALATDEVHALVRAHLARHEPELDEIKQFHASVRSRPKANREDALKILKDHELAEYKSGFRLPEMTTVKGLRALRAWTGELKFLQGIPCARLAETGESSAAAAMEEDAPEDMDEDGGDEEDVAE* # ORIGINAL: g8637.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 43055 45608 . - . ID=g8637;Name=g8637.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 43055 45608 . - . ID=g8637.t1;Parent=g8637;Name=g8637.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 45471 45608 . - . ID=g8637.t1.exon1;Parent=g8637.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 45471 45608 . - 0 ID=cds.g8637.t1;Parent=g8637.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 43055 45295 . - . ID=g8637.t1.exon2;Parent=g8637.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 43055 45295 . - 0 ID=cds.g8637.t1;Parent=g8637.t1 #PROT g8637.t1 g8637 MEGRLRMRIFALGGGEDKKVKRRRTAWKKYWCTIDRGLFIYSRKFRDLPSSNCVAIHQLSCEAVPETVSGRKYVFAVNFGSAVFWCQAAGALECARWQKVFIVKAEFLNLRRSFNWNDERDLCACAPRLASMLALAVSMCAKSLVAEITGTINYLFSIAPAFMRAFVSASGLVVLVRALGEFETAPKEIVRAVSSVSEVAALHVPLIQAGVFDSLEKFSRHGGFDALAHAVVRLLVAADIQSVRKTMCALKSSAAVQLIPILVDAAASYATAIDRHLKPEFVANLGALSLSEASSSWPAIPLHAGSSTRGRLHSAVSDSRASVSPEPLRPRHATMPSASPHGPAGSTTSTVGVTLRCVPRLSALAAASIVDHSNASGIIGLRAVADSLHVPILNDFASLVLVFSALERLAEESKFRTKLTRPLRSLPFLRSAALKSRPIARLFARIVHLLSADARHEVHRVAWAKGRREGALPCLEPLIASDAPSDHQLCVQLVSVLSSHLCCGHRIARDSQGTALDALVRLARMGDADCLKTLCDMVKRELAPALIRAKVPSALRAMFLDANVGSKLRFLASEALDSVRELRLEQWQPSHVVISELACFTSTRSLSLKGSYIGDGVVSSLAAYLPALTTINFAMTSITDAEFALLVPNTRSLRSLVVPTQCGDAAVKALMPLAQSLEELDLAICRITPACFPHLCRLVALRDLNLFSTATNNECARMISQSLVNLRRLNLCMTRVTDEGAASLASLVHLTHLNLKNTDLHAPTAIMLKSLLLDMVDLNVDFTSADPRMFAS* # ORIGINAL: g8630.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 19651 20745 . + . ID=g8630;Name=g8630.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 19651 20745 . + . ID=g8630.t1;Parent=g8630;Name=g8630.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 19651 20745 . + . ID=g8630.t1.exon1;Parent=g8630.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 19651 20745 . + 0 ID=cds.g8630.t1;Parent=g8630.t1 #PROT g8630.t1 g8630 MASVLIFRGHTDSVSAVCFRRGECRLVTACSCDRHVCTWDAATGKCISDTEIESSLFPHAIAFSPLGDLCAFACDSAVHVRLTDDVGKVFKTLKNDVGDVEFLAFSPNGRLLASVPRLKRHSPAKIDLWDLETGKLVRMISHHDTHPAEAEEVACIAFTPDGTYLASGGSMNIVHFWDVATGEHVKGFSGCGGRVSAVSFSADGASLAIGGSNGIRVWDLGTCECVLSTGDRNGVPLNSNTSTMSFSPDGRSLAFGSGDGTLTILDIKTTKARVFGGHCKEISAVAFSSDGRKLAASCLDGTVQVRSVSGGTQALGSAAASVASVTFSVVLGLFVFFGSLVAFRYFGKRLARAYYGDDATCPLH* # PASA_UPDATE: g8636.t1, single gene model update, valid-1, status:[pasa:asmbl_8956,status:3], valid-1 # PASA_UPDATE: g8636.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8955,status:3], valid-1 NODE_6_length_79858_cov_50.7929 . gene 40931 42578 . + . ID=g8636;Name=g8636.t1 NODE_6_length_79858_cov_50.7929 . mRNA 40931 42578 . + . ID=g8636.t1;Parent=g8636;Name=g8636.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 40931 41169 . + . ID=g8636.t1.utr5p1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . exon 40931 41253 . + . ID=g8636.t1.exon1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . CDS 41170 41253 . + 0 ID=cds.g8636.t1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . exon 41535 41613 . + . ID=g8636.t1.exon2;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . CDS 41535 41613 . + 0 ID=cds.g8636.t1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . exon 41787 41973 . + . ID=g8636.t1.exon3;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . CDS 41787 41973 . + 2 ID=cds.g8636.t1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . exon 42270 42578 . + . ID=g8636.t1.exon4;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . CDS 42270 42336 . + 1 ID=cds.g8636.t1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 42337 42578 . + . ID=g8636.t1.utr3p1;Parent=g8636.t1 NODE_6_length_79858_cov_50.7929 . mRNA 40931 42578 . + . ID=g8636.t1.1.5b6be70c;Parent=g8636;Name=g8636.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 40931 41169 . + . ID=g8636.t1.1.5b6be70c.utr5p1;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . exon 40931 41253 . + . ID=g8636.t1.1.5b6be70c.exon1;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . CDS 41170 41253 . + 0 ID=cds.g8636.t1.1.5b6be70c;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . exon 41535 41613 . + . ID=g8636.t1.1.5b6be70c.exon2;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . CDS 41535 41613 . + 0 ID=cds.g8636.t1.1.5b6be70c;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . exon 41787 42578 . + . ID=g8636.t1.1.5b6be70c.exon3;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . CDS 41787 42127 . + 2 ID=cds.g8636.t1.1.5b6be70c;Parent=g8636.t1.1.5b6be70c NODE_6_length_79858_cov_50.7929 . three_prime_UTR 42128 42578 . + . ID=g8636.t1.1.5b6be70c.utr3p1;Parent=g8636.t1.1.5b6be70c #PROT g8636.t1 g8636 MVAATVVPARFLATMAHFVIVLILWWSRDENIKADLPDVYTQSQYDDRDKEMIIALSLTMACFAVEFIGLFRGISLFNPGTNVAYIAAHAGAAVSLSFYILDVWEYGTYWYIFGFCSAFPALIEAFTFFSVYGLKAID* #PROT g8636.t1.1.5b6be70c g8636 MVAATVVPARFLATMAHFVIVLILWWSRDENIKADLPDVYTQSQYDDRDKEMIIALSLTMACFAVEFIGLFRGISLFNPGTNVAYIAAHAGAAVSLSFYILDVWEYGTYWYIFGFCRWVSSLQQVRRVRVRARVRVCCVYELSSVSARFLESACMYAGECVHVCEDL* # ORIGINAL: g8639.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 53084 54527 . - . ID=g8639;Name=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 53084 54527 . - . ID=g8639.t1;Parent=g8639;Name=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 54346 54527 . - . ID=g8639.t1.exon1;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 54346 54527 . - 0 ID=cds.g8639.t1;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 54163 54227 . - . ID=g8639.t1.exon2;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 54163 54227 . - 1 ID=cds.g8639.t1;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 53613 53799 . - . ID=g8639.t1.exon3;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 53613 53799 . - 2 ID=cds.g8639.t1;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 53084 53453 . - . ID=g8639.t1.exon4;Parent=g8639.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 53084 53453 . - 1 ID=cds.g8639.t1;Parent=g8639.t1 #PROT g8639.t1 g8639 MSDAHAPAVARIPRSNTISTIARPAVSAGPSEAHIIPSAAAGKIDAGFKPFVRNYAILAEYKKLPRDGPRGVYVVPSAESVLAWHGVIVVRHGTYEGGVFKFAVHIPETYPEESPEVFFLNDVFHPAIDGETGRLDMRKQFPQWRRGKHQLCDVLHYIKRIFYKVDPEMNANIEASRLLQKDSAAYAAHVQATIAQINSRIYDNEDQSDIKFSPWKPDVHSHARQAMLERRTPDEPPAPHAVGSTQLTGLSWVAKGSNTSFSKGMDF* # PASA_UPDATE: g8627.t1, single gene model update, valid-1, status:[pasa:asmbl_8950,status:3], valid-1 NODE_6_length_79858_cov_50.7929 . gene 4320 8834 . + . ID=g8627;Name=g8627.t1 NODE_6_length_79858_cov_50.7929 . mRNA 4320 8834 . + . ID=g8627.t1;Parent=g8627;Name=g8627.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 4320 4712 . + . ID=g8627.t1.utr5p1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . exon 4320 4912 . + . ID=g8627.t1.exon1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . CDS 4713 4912 . + 0 ID=cds.g8627.t1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . exon 5090 5219 . + . ID=g8627.t1.exon2;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . CDS 5090 5219 . + 1 ID=cds.g8627.t1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . exon 5465 5641 . + . ID=g8627.t1.exon3;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . CDS 5465 5641 . + 0 ID=cds.g8627.t1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . exon 5811 8834 . + . ID=g8627.t1.exon4;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . CDS 5811 8603 . + 0 ID=cds.g8627.t1;Parent=g8627.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 8604 8834 . + . ID=g8627.t1.utr3p1;Parent=g8627.t1 #PROT g8627.t1 g8627 MATAVATDLGRVPGVGGGAIGGARYTNGAHSHANGTGGASANNGSGTHAKGLGTGGPAAKVKAQPVGEKTYFESMSDYIQDYIPLPIPAVVKAINGATQPAKTVQDDHEQVLWVQFDTGDDGDVPVRHSAARGNRMFLTLGYANGYQLWDVTDGENAREIVSRRTGPIKQHCTRVLLSPLARPGMWDKFAAQRPLMTVVSADDTVGNASAVTALQSGQAVAKSSVRVLSLQTHECVSTLRFRSEIHGVQCNRRIVAVASRECIYAFKAETLENAFSINGCFLSAGPVVNPFALGSRWIAYAASQPAQSPRPTEAARVPTQTAMEVAKDVAKDIASGLYYLGDLGIQRVSSYLSGPGDQSSRTGMGAPGMPASPSVAQQQQQQQQPTNTAGFNDEASMSADGYPSSSADERSAGTVVIRDVVSRKVVTHFRAMRHEISAMAFDPSGQLLVTASNMGHGFNVFQIMPPHLSARHVAPQSPAASHAARDRSAQSQSASASASNSGSLPGGSHVGGSQNGSASSNGGGASSRLGSRSRLNVQTPPAPESTLVRHIYKLHRGITNAVVVDVSFSNDGRWVALSTSRGTTHVFAISPSGGPVDVLTHTAASVANESRRFTSAGLEEVMSQPPPDLISLQSIARIRSPCVPPSPPTPSASDDPQTQQHKHALASTMAAMGGASLSPVAVRFVPLMMGSTSASWSVPSVSTPTPISATGEDRAHHSPDAQSGSQTVLIACAEKGQLLQYRIIPHPPVQRTADQSVLEATARPLKEWTLGRTESWPETEVAVRRAGGAGLKSVGNGRHGTAANGHANGATNGVGNGVANNKAAGEERRWLAGVEISTHTPLHRPLWMGPQFTFKTYQAHEIAMLHPGGPSFYGADEDQYYREEILSRGTGATGVANVLSHHRGTPEDALVIPLRLADAKLCETPPSPHAMDEEDIMLSLSKAMQTTMRPHSIGSSNGVGNGAGSFLGGRSVESGRGVVGFETGALNVRSRPPHYEFGSSPSGASRHLHGLGVPGNGHSRGGSRAGGTGHSLGSHSGTHSAASDDGSDIDFVVDDEDEGAEEDWGAESAFPDAFDDDLDAEDMNGAQLYPDVGDEEEVM* # ORIGINAL: g8638.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 48172 51350 . + . ID=g8638;Name=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 48172 51350 . + . ID=g8638.t1;Parent=g8638;Name=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 48172 48228 . + . ID=g8638.t1.exon1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 48172 48228 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 48473 48760 . + . ID=g8638.t1.exon2;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 48473 48760 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 48957 49045 . + . ID=g8638.t1.exon3;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 48957 49045 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 49251 49341 . + . ID=g8638.t1.exon4;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 49251 49341 . + 1 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 49561 49692 . + . ID=g8638.t1.exon5;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 49561 49692 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 49867 50013 . + . ID=g8638.t1.exon6;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 49867 50013 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 50321 50416 . + . ID=g8638.t1.exon7;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 50321 50416 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 50665 50836 . + . ID=g8638.t1.exon8;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 50665 50836 . + 0 ID=cds.g8638.t1;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 51100 51350 . + . ID=g8638.t1.exon9;Parent=g8638.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 51100 51350 . + 2 ID=cds.g8638.t1;Parent=g8638.t1 #PROT g8638.t1 g8638 MADAAVGTRQLRLRPRPATTTGDASLHAVSRSTARVTKAKEATQQRRVIKRDTLSLTPGLAADLVPADKSLSADGRRRKRHVPSATAESVSPPSALDKMCTISGHNAPMVTPPADPKTAATSKHGSFAPCRCMPSGTCGSSPDSGLSFGSDDAVESPYMANGLRTREQEIYMPDKDRFQGWWEYLTVREQEMPISCFYLRNHPTLQERMRTILIEWMMEVCEEYKLHRETLHIAIHYVDRYLTVSSQCTKSALQLIGVAALFIASKLEEIYPPKLDEFAFVTDGACTKKEILKMETNMMAHLNWQLTPITPNAWVSFYMQLTAAVTWPAGIEFLCTRCAFDRSLFVQILQLIDLCVLDMQVTRFLPSAIAASAMRLAYPPFANTEMIHAITGYSIDNLSECIEWMRPFAAAVGRLRFTVVEPRSKVHTCDTLAVCLVSSK* # ORIGINAL: g8646.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 76239 78362 . - . ID=g8646;Name=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 76239 78362 . - . ID=g8646.t1;Parent=g8646;Name=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 77695 78362 . - . ID=g8646.t1.exon1;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 77695 78362 . - 0 ID=cds.g8646.t1;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 77278 77480 . - . ID=g8646.t1.exon2;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 77278 77480 . - 1 ID=cds.g8646.t1;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 76893 77150 . - . ID=g8646.t1.exon3;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 76893 77150 . - 2 ID=cds.g8646.t1;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 76610 76719 . - . ID=g8646.t1.exon4;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 76610 76719 . - 2 ID=cds.g8646.t1;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 76239 76397 . - . ID=g8646.t1.exon5;Parent=g8646.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 76239 76397 . - 0 ID=cds.g8646.t1;Parent=g8646.t1 #PROT g8646.t1 g8646 MGAPSNSDAVGTSGSNVVMASVLNLANSVIGVSVLAMAYCFKECGLVLGTILMLLTAFFARQSSVLLLGSLRFAKKRTYEALGLCSFGEQGKLAVELSLIGLLVGSLIASLTVVGDVVAPIVAEWMDMPVAYVRTPALALISALVAFPLSLRRNIQSLSNISAMSLVFYAILACVMVYLAARRHLFGGDSAVQDVAGAQLVLFNLNGVLPCIPILGFGFVCQCTIFVVYDELPQPNLPLMYGIVNKAVATVASVYFVTGFFGYLAFSAQHIDGDILNNLDRSIGFDLVKLGFAISVVTTLPLSVYPLRESVDSLVFRPASSQNAATVDPVLDITAPIPDGRFFAITLFLVGFCTIMAIVAPRIEFILGLTGATMGIRGMRQTARLLLFIGIVFTVLCTAAVFMTPESHAETAAAIPESPVAHSFDPRDILPVDTVPVRAVTGRRIDAVFDPIENFLKRHKNATAH* # ORIGINAL: g8628.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 9543 14111 . + . ID=g8628;Name=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 9543 14111 . + . ID=g8628.t1;Parent=g8628;Name=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 9543 9602 . + . ID=g8628.t1.exon1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 9543 9602 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 9749 10308 . + . ID=g8628.t1.exon2;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 9749 10308 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 10541 10664 . + . ID=g8628.t1.exon3;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 10541 10664 . + 1 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 10798 10893 . + . ID=g8628.t1.exon4;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 10798 10893 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 11122 11278 . + . ID=g8628.t1.exon5;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 11122 11278 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 11521 11650 . + . ID=g8628.t1.exon6;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 11521 11650 . + 2 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 11840 12010 . + . ID=g8628.t1.exon7;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 11840 12010 . + 1 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 12420 13302 . + . ID=g8628.t1.exon8;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 12420 13302 . + 1 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 13400 13558 . + . ID=g8628.t1.exon9;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 13400 13558 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 13676 13749 . + . ID=g8628.t1.exon10;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 13676 13749 . + 0 ID=cds.g8628.t1;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 13931 14111 . + . ID=g8628.t1.exon11;Parent=g8628.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 13931 14111 . + 1 ID=cds.g8628.t1;Parent=g8628.t1 #PROT g8628.t1 g8628 MASSFWPWVSADRFSWVVHKFGGTSVANANCYKQVATILEDEHTIEARAGHVRLAAVVSAMGGVTDALLAVTDLATKHDSAYVHKFEDVLTRHETVITDLLGSTHARDSLVSAIRNDAKDIWDLLRAIFLTKSCSDFYQELIAGHGEIWSAQILNAYLRSLNRKSEWLDARQVLCVNDADKGWSVTPSVDWTMTQAKYNEWFQHKGRDAEVVVVTGFVASTTEGTPTTLKRNGSDYSASIFGSVFNARVITIWTDVDGVYSADPRKVPAAELIPELTYSEAVEFSFYGAKILHPKTMAPAVKKNIPIWIRNTFNPHCAGTKISREVSHAPENGDAMRAAVRGLCSIDNIALVTVHAMNLGTDDYTPLSIRNRLLNSLKNISVPLVMMAQSAPEHTVSFCVPEESGDVAKQTIEEHFRKEFMGQPSPHNVELQRGFSILTAVGDKINETPGIAARFFRALGGVNVNVLGIAQNGERIICVLLKRRDCPLALRTLHAAFKVSYRVVSVGVIGCGLVGGEFLSMVAANAARVLESEKIDLCIRGIMRSGRMALDRGGFGSNWKDYLETSSVPANIDAFVSHVASDEVHHAVIVDCTSSEDVASLYPAWLRRGIHIVTPNKKGVSGELSLYNAIREAAHPTPGAKAHFMHEATVGAGLPVIGTLKTLVDTGDRVVSIEGVLSGTLSYIFNNFCDPEKATVPFSHIVKEAKELGLTEPNPKDDLSGSDVARKVCILGRLSGHSVALSSVAVKPILPEELLATASGDEFMAKLPSFDAHFDALRKQAVSENKVLRFVGVVSSHGCSVELKAYEKNHAIANLGGCDNILAFTTQRYTRPLVVQGPGAGAAVTAAGVFGDLLFAVRSALSNV* # ORIGINAL: g8647.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 78988 79446 . + . ID=g8647;Name=g8647.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 78988 79446 . + . ID=g8647.t1;Parent=g8647;Name=g8647.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 78988 79105 . + . ID=g8647.t1.exon1;Parent=g8647.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 78988 79105 . + 0 ID=cds.g8647.t1;Parent=g8647.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 79262 79446 . + . ID=g8647.t1.exon2;Parent=g8647.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 79262 79446 . + 2 ID=cds.g8647.t1;Parent=g8647.t1 #PROT g8647.t1 g8647 MASSALPPASAAPTAVVESGEALYFGATSWDTLGRTKLKEEERGDLNSAHRFSALAGVPVVDVASGPNAAHSVIVTASGCVLTFGRNEMGQLGLGRCSQC* # PASA_UPDATE: g8632.t1, single gene model update, valid-1, status:[pasa:asmbl_8943,status:12],[pasa:asmbl_8948,status:12], valid-1 NODE_6_length_79858_cov_50.7929 . gene 23222 24408 . - . ID=g8632;Name=g8632.t1 NODE_6_length_79858_cov_50.7929 . mRNA 23222 24408 . - . ID=g8632.t1;Parent=g8632;Name=g8632.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 24353 24408 . - . ID=g8632.t1.utr5p1;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 23984 23985 . - . ID=g8632.t1.utr5p2;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . exon 24353 24408 . - . ID=g8632.t1.exon1;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . exon 23881 23985 . - . ID=g8632.t1.exon2;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . CDS 23881 23983 . - 0 ID=cds.g8632.t1;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . exon 23222 23752 . - . ID=g8632.t1.exon3;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . CDS 23385 23752 . - 2 ID=cds.g8632.t1;Parent=g8632.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 23222 23384 . - . ID=g8632.t1.utr3p1;Parent=g8632.t1 #PROT g8632.t1 g8632 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKNYTTPKKIAHKKKKVKLAVLKYYKVDENGKITRLRRECPHTECGAGVFMASHFDRQYCGKCGLTFVFSKPETA* # PASA_UPDATE: g8645.t1, single gene model update, valid-1, status:[pasa:asmbl_8957,status:3], valid-1 NODE_6_length_79858_cov_50.7929 . gene 74591 75808 . + . ID=g8645;Name=g8645.t1 NODE_6_length_79858_cov_50.7929 . mRNA 74591 75808 . + . ID=g8645.t1;Parent=g8645;Name=g8645.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 74591 74652 . + . ID=g8645.t1.utr5p1;Parent=g8645.t1 NODE_6_length_79858_cov_50.7929 . exon 74591 74958 . + . ID=g8645.t1.exon1;Parent=g8645.t1 NODE_6_length_79858_cov_50.7929 . CDS 74653 74958 . + 0 ID=cds.g8645.t1;Parent=g8645.t1 NODE_6_length_79858_cov_50.7929 . exon 75325 75808 . + . ID=g8645.t1.exon2;Parent=g8645.t1 NODE_6_length_79858_cov_50.7929 . CDS 75325 75684 . + 0 ID=cds.g8645.t1;Parent=g8645.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 75685 75808 . + . ID=g8645.t1.utr3p1;Parent=g8645.t1 #PROT g8645.t1 g8645 MSSSEGQSGESSPLLGAINGSNGSLNRVAAQPSPLNPNYSGYTHAHPANPTHSSRPGLSSASSSSAAPFQPPGFKGKPVRSLSGIDLSAPDVKFTEEEFNRQVLRELRKLSQAANPREKLQFRVLIVNTVLLLASVMVLTGLLLGAKIELDSMGNKLDKMVDTMGMMYTATAQTVSQVALFDTHTTNIIYNTYAMCNVITLGTEKEKDCRNNIGTNLTKGT* # ORIGINAL: g8642.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 60277 65534 . + . ID=g8642;Name=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 60277 65534 . + . ID=g8642.t1;Parent=g8642;Name=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 60277 60348 . + . ID=g8642.t1.exon1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 60277 60348 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 60539 60733 . + . ID=g8642.t1.exon2;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 60539 60733 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 60932 61048 . + . ID=g8642.t1.exon3;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 60932 61048 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 61262 61590 . + . ID=g8642.t1.exon4;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 61262 61590 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 61757 61838 . + . ID=g8642.t1.exon5;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 61757 61838 . + 1 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 62098 62739 . + . ID=g8642.t1.exon6;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 62098 62739 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 62910 65534 . + . ID=g8642.t1.exon7;Parent=g8642.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 62910 65534 . + 0 ID=cds.g8642.t1;Parent=g8642.t1 #PROT g8642.t1 g8642 MDRYIQYGEIGHGSASIVYKGRKKGSIEYVAICSMDKARRARAENEAAVLRTLSHANVIRYHEYHVTTNHLWKVVEYCSGGDLATLIAQDERLPETTVRSFGRDLACGLQYIHSQGIVCCDIKPSNILVDGQIGRLLFSDFGLAMDVRGADDITRDAHTLHRLHTPSRSSHGRGAAGTSETPNRSAASPCYGAPELSARGGPLLSRASDVWALGCVIYEMTAGVPPFVSASLVELRAKIASAAADYPPELFAQPVRALLSSMLEKSASARPAWTALRTHAFWGSPALDALDTTVVDRHFARIANATKGAGPAPPSATASEFGAARNDPHCEDDDDDARPFTRESGSHVVMERVDTVDDDEDAGDADRADNDDMGGRDEDMGDENSGNDADEFVGGPEASPRKIVAWNDDVSAHLGSPAGLARATVVLARTPSAAPDLIFHPSDSAVEEIASTRVGAAGSGMSPAKIDKIIPVKAYTPMKLGKEAPADAQSHLAELVRAIDAATPRVAVACLAYLERLAMAEESANILANSHAANFLVVRLRPSQGAPPAWTAEVRARACRVLALCFRHATRLADGFEIPEAFSSLCDVVRSAGTVRDILRQALPALGELLFYCASVGTCTVGGPDSQPIEPPEIPSSALGAVVRRLADSDDEVLQLSALRTIANMAAVPGEHMRRICTGETALVVWKAFASTKNAEVKAASATALSRMVRFSVAIGQHIVDKVGTRSIASGLQDSGARVRQAFLNILNVLLKDSGDGGSLRRAQNLLLEDAAIVQGVLGALGPAGPNEVLRAKAMLAAGQMCRHSKDALLALCEGRLVHLMDKDARSLSAGMSNRPGSAHGARGAQDDGSFNLAVPPSPSVAGTDPYAARCLEFLLRTLARTAPTIMDSVRTGLASLAERRHATVAQAKTLRLALRHFPTVVHLMSSAVLRARMVDGLLLEDLTSLLSLVGQLSGPGDRMAPIGPRAWEECAEKVFAIGEAVCQHTSILMGHYSAIVQRLLPALATLLDCPEDTARLQASRMVACVVTAYAHLPALFDPTSDAPPVKASTRLLNQVLVKEILVRVPPLLTDKEPIPSVALRLLHSVLLRAPAYCSIFQRLGIVSAVAARMAESDGSVAVVGLMRLLLRAPPEDVDRCAVVDAGALRGLARILAGVARVSREGSAIVLQSAAGSAESLRDALVLVPQMLRCAQSAAEVSAEFAAAAMSASRELAEAALPRALEVLALNIRGDATQATLGASTPRTSRPGTARAADIALEDSAILARSCAEIVLLVARLHSDLHKDILGAAGQTALAHALNVSEDRELRAAVLSVVEIVCARSPHMARLLMENADGEESADNPLLAAVQARAGSR* # ORIGINAL: g8640.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 54967 58448 . + . ID=g8640;Name=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 54967 58448 . + . ID=g8640.t1;Parent=g8640;Name=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 54967 55360 . + . ID=g8640.t1.exon1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 54967 55360 . + 0 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 55506 56134 . + . ID=g8640.t1.exon2;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 55506 56134 . + 2 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 56435 56728 . + . ID=g8640.t1.exon3;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 56435 56728 . + 0 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 56972 57055 . + . ID=g8640.t1.exon4;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 56972 57055 . + 0 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 57299 57386 . + . ID=g8640.t1.exon5;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 57299 57386 . + 0 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 57633 57728 . + . ID=g8640.t1.exon6;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 57633 57728 . + 2 ID=cds.g8640.t1;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 57865 58448 . + . ID=g8640.t1.exon7;Parent=g8640.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 57865 58448 . + 2 ID=cds.g8640.t1;Parent=g8640.t1 #PROT g8640.t1 g8640 MLRALHLGVRLALPAHLARRASSLSVAASNNPPPAATTNRVGGRVRGRRREAVHDVDTQAALDTSADARAGGRTPSGRKGRAIVHSEPTPTPDARQTDEFHAWKELEWGRANMRTTLLPEKLATELERVIAREPSLDVIFKNARTLCDHLLMVPTAATLRELVSTEVEEKKKASAEDKDKRGLLSPAVESRLRTYVSAMSGRVRYGARETLAYALGRMPSVFASTDRVLAEVRKIAPDFLPRTMLDFGSGTGSAIWAAHNNFASLHSFLGVDVSQDMIDLSTQLIEQNGSSVIGGVVFARYLSATKKKYDLVVASYALSDVDSDVLPATVERLWEKTGDVLVLVEPGNQRGFQNLLLARKAIMSPQSVSAPMEESEVRMQLQQLLDGSEEDGGMPVTKSNIDAIVRQLSLEERKASAAQALNFDYEYDPAAVDAHILAPCPHNGPCPLMRDTSPCAFFQRAHLPPFANASDYRRKSGHDFRAERFSYLVIRRGQRPKEAKELVNWPRIVRHNPDGHGKAAELDLCHPTGNVSRHTVSASQGNRILREAKSRMVGDAFPFAHSSGRTESTTHGGPLQGSSTTAALATASSIQSAESDRKKAEKEAKIARLKAEMLHGTSRGATLEAELATKRMPKGMWTALYPGADRDAAAIPKKDRHDAPTARGGGTKSAGVEMEDADSDRAAPTNPASDAPVATVSTASTVSTRRNGVGASAQTARPLRRE* # ORIGINAL: g8626.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 363 3180 . + . ID=g8626;Name=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 363 3180 . + . ID=g8626.t1;Parent=g8626;Name=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 363 527 . + . ID=g8626.t1.exon1;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 363 527 . + 1 ID=cds.g8626.t1;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 729 883 . + . ID=g8626.t1.exon2;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 729 883 . + 1 ID=cds.g8626.t1;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 1113 1464 . + . ID=g8626.t1.exon3;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 1113 1464 . + 2 ID=cds.g8626.t1;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 1759 2736 . + . ID=g8626.t1.exon4;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 1759 2736 . + 1 ID=cds.g8626.t1;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 2994 3180 . + . ID=g8626.t1.exon5;Parent=g8626.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 2994 3180 . + 1 ID=cds.g8626.t1;Parent=g8626.t1 #PROT g8626.t1 g8626 NIRRLAANKKIDVFELVAKSLAPSIYGQEHIKQGLLCLLLGGMEKNLPNGTHLRGDINMLMVGDPSTAKSQILRFALNTAPLAIATTGRGSSGVGLTAAVTTDSETGERRLEAGAMVLADRGIVCIDEFDKMSDADRVAIHEVMEQQTVTIAKAGIHTSLNARCSVLAAANPVYGQYDQYKSPMDNICLPDSLLSRFDLLFIVLDTMEPEHDRAISDHVLRMHRYRRPGEAEGAVLPMEHGGTSIGGTGVRQDVAENDETPVFEKYDALLHGSRGRSKHREDGVLSLAFVKKYIHYAKNRMKPKLTAEAAKHMGEVFSELRNDEDKKTHKTMPITARTLESLIRLATAHAKVRLSNHVTLEDSMEAADILRFAIFQEKVKRPKKVREEDTDDDDEGGNGGNGGNGDGKDGDNAADGKTPAKKGKKKKGPDADADADADAGADVDMDAGAQPSQELSQQTPRSRRSARGSGRSAGASQEEDDPFRFVYEESAAAIGDAPGSQRTPRSSAKKTKKQTAQVEDKVDEQVEQASGEGSAEPLSAPAAVDVSPERTERFRKLLSDMFVRERASSRPTDQIFAEFEGEYTRAEVIWLLRRMHEENKIMYTPEAVYLV* # PASA_UPDATE: g8641.t1, single gene model update, valid-1, status:[pasa:asmbl_8949,status:3], valid-1 NODE_6_length_79858_cov_50.7929 . gene 57755 59830 . - . ID=g8641;Name=g8641.t1 NODE_6_length_79858_cov_50.7929 . mRNA 57755 59830 . - . ID=g8641.t1;Parent=g8641;Name=g8641.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 59755 59830 . - . ID=g8641.t1.utr5p1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . exon 59569 59830 . - . ID=g8641.t1.exon1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . CDS 59569 59754 . - 0 ID=cds.g8641.t1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . exon 59384 59475 . - . ID=g8641.t1.exon2;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . CDS 59384 59475 . - 0 ID=cds.g8641.t1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . exon 58904 59139 . - . ID=g8641.t1.exon3;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . CDS 58904 59139 . - 1 ID=cds.g8641.t1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . exon 57755 58714 . - . ID=g8641.t1.exon4;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . CDS 58470 58714 . - 2 ID=cds.g8641.t1;Parent=g8641.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 57755 58469 . - . ID=g8641.t1.utr3p1;Parent=g8641.t1 #PROT g8641.t1 g8641 MAEYEDSLPATAIPVVRDLISLEFEVQSTTKDIRDTAASLAEVVALNNAAKEKLAAMSEKIKALERLAGEQDRESDARLILDKAGRHARQCDGLRTALRKANIVAKQNSDRKHVSERAELLSTSGSQLRQRPERSKEGLVTAASDVTESLKATARLMAAQLQQSSETMEVLATSSKTVTNIKAEFVGFGGVVHSGKLLLTKLKRRELTDKFLVVFGIAVFACTVLYIIKRRVFGGGGGAMATPAPSPSPTLF* # PASA_UPDATE: g8633.t1, single gene model update, valid-1, status:[pasa:asmbl_8944,status:12],[pasa:asmbl_8945,status:12],[pasa:asmbl_8952,status:12],[pasa:asmbl_8953,status:12], valid-1 NODE_6_length_79858_cov_50.7929 . gene 25376 35679 . + . ID=g8633;Name=g8633.t1 NODE_6_length_79858_cov_50.7929 . mRNA 25376 35679 . + . ID=g8633.t1;Parent=g8633;Name=g8633.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 25376 25403 . + . ID=g8633.t1.utr5p1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . five_prime_UTR 25869 25872 . + . ID=g8633.t1.utr5p2;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 25376 25403 . + . ID=g8633.t1.exon1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 25869 25974 . + . ID=g8633.t1.exon2;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 25873 25974 . + 0 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 26242 26465 . + . ID=g8633.t1.exon3;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 26242 26465 . + 0 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 26788 26909 . + . ID=g8633.t1.exon4;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 26788 26909 . + 1 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 27051 27291 . + . ID=g8633.t1.exon5;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 27051 27291 . + 2 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 27495 27840 . + . ID=g8633.t1.exon6;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 27495 27840 . + 1 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 28001 28114 . + . ID=g8633.t1.exon7;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 28001 28114 . + 0 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 28281 28592 . + . ID=g8633.t1.exon8;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 28281 28592 . + 0 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 28833 34023 . + . ID=g8633.t1.exon9;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 28833 34023 . + 0 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 34233 34365 . + . ID=g8633.t1.exon10;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 34233 34365 . + 2 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . exon 34687 35679 . + . ID=g8633.t1.exon11;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . CDS 34687 34894 . + 1 ID=cds.g8633.t1;Parent=g8633.t1 NODE_6_length_79858_cov_50.7929 . three_prime_UTR 34895 35679 . + . ID=g8633.t1.utr3p1;Parent=g8633.t1 #PROT g8633.t1 g8633 MTLNLSLLVASQISYLASNLSRKNYKSSVAEITHLVELYGLDAHACLLRCLLKLIDFAENAKASANTRDQFQIQLLSQEIASVLERPNFATILCLAFQPISDTTPSQRVVTPTAHFFSQFSRLLKLSVAQEVAVGFALLKSTDSDLTSQASAYVKKRVPELARQGVQSLHPSTLTFLAHEIDARGRELGISDEDSVSLVGTMQRVFPQKNVPYHLAPVVYPGRHEAPADRLYDADTAGPLRGMQGMAPSALADLLREAGYHSCATPAAARDLVSQFGEGDVTPGSVARVLGMMAGTTSGLEDGAPPLQTTLVLSNAPWERRNDGSSETKATSWNVDNLVDAIRDLHPKVKWTDVMYALDFPGFFVSEVDGLSLIISAFRRATKEGIPSDVFFRDWNNRRGQLSFLRAALVASPDVLHFPTGARRVTVDLLKGINIADPSVMPWTSIDFIEALLRIGDGDLYAPTRLVFEHGISRCPEVLMIGLGQASTAMTSLQEDVMTAILPTFLGSHPNSGVVLQRVWHSRRDFIVRRLADWHRRDADQQQVLLRILDIVQDLKAVNAFLDARPFAFAVEFAAFASRRDFVNLDMWLADHISEHKSPFVRACLGYLYARVPKRAGNGVTVAQAQPEALSSVLKAVQTNSSLVPPEAQDELREVLAFYGGSGPGGRQLSSAAAAAAAAAAASIQHTSAPEAPSQSVSSQNHSHSSANAAPAAAVATGAGMDMTFSPEIEEEANTYFQKMYNGRMTVEELVSLLRTFRASPVQKEQEVNACMLRNLFEEYRFFGTYPPQALSLTAVLIGSLIQHRLVAHSALGTALRYVYEGLRQPPDSPLFGFGATALDQFRGRLLEWPSYCHLIASLGHFSQFPPVISAVIEKGVRLYHAGGESNDDHAMKIATGRISTSRPGQSSEPLPGSPARAGAPRDVQRVAGGVGMTGASVASPAAARLTNLDARTPMSPQPSGFGISANINTLLVAAESSGIDRPVENVEDKVHFLFNNLSSTNLDQKASELLDLLGQTHFPWLAQYLVVKRASIEPNFHQLYLQFVDAMKSPVFNEILLRETLTNVRALLRSEKIGSSASSSERSLLKNLGSWLGLQTLSRNKPILHRDLPLKELLLEAYEREHLLYVVPFIAKVLEACKSRVFRPPNPWLMAIMSVLKELHGLPDLKLNLKFEVEVLCKNISLDINEISPATILKQIQLHPRTSRSPGLTPQSPLTVATANKLAQLATHDLGFALPAHAGASPLSPTSSAANAAAGGVQVPTRQPNSINMAAISPSSIATVAPFIFVNPAILLFQQQPQLKQCIQVALERAIQEIISPVVERSCTIACISTRELVLKDFALEPDDIRLRKAAHMMVQNLAGRLAMVTSKDPLRQSIATHFKALIQNNLHVVTPADPQQLGSLVEQAVQLVVTDNVDLACAFVEKAAMTKVVADIDEQLAHAVAMRRRFRDRGQLYHDATALSNPRVQSLPEPLRPKLGGLAPHQLVVYEEFVKFAPASTAASSVASGIGAVAQPGGAIATSASGKDELASQLKGMGIHEGGVSDALHGQFVAALEKILADIGKVLNQNAGAALSSIPPNHELYALVRQIPLLAAQSQAREDAASGAAIRVVKALLDGETTLARDTYLTALNSLAEVSKRVPRDVAMWLAAGEDDYRFHVDTVALLIRFRLVSLQEYDAGLARLVDAARNASTVDYAIRLIRHCLYDEGINASGIAVDLHLTLDALGKQASRGRVAPELLASLQEAMRATEKDDSLKLGGIGGMGVQGRMGGMGGILGVGVGGVPPSVPVMPVEMSLGPMGAGIMGVIPNADDPSGLREQALFAIEEWVRITQSPAQTEKMYTAFVAKLQAQGLLKTDDTTSRFLRIFVELSVESFHASLDKAPKQPAYQVADGFTKLTVLLIKYIGDPTNPGPKMALLVRALTTVYDVLLRDYERRKTRFNQRIHLRLLLNLLVDLNAADPVLDPINLQVLSAFSNTFHMLQPSRFVGFAFAWLELVSHRVFMPKLLRIGNQKGWPLFQRLLVDQFRFLAPFLRVAEMTEPTRALYKGTLRVLLVLLHDFPEFLCENHFVFCDVIPPTCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQLPRILSNYTAALQQNNFKQDVDVYLKTRGPVSFLLDLRTRLLLSPEESAVAGTRYNVSLINSLALYVGVQAIAQSKSPQGASPITHSAPMDIFQQLIVDLDTEGRYLLLNAIANQLRYPNSHTHYFSCVLLYLFAEANQEIIQEQITRVLLERLIVHRPHPWGLLITFIELIKNRCYNFWSHSFVRCAPEIERLFESVARSCMYPQAKAQPGDPIE* # ORIGINAL: g8629.t1 original gene structure, not modified by PASA NODE_6_length_79858_cov_50.7929 AUGUSTUS gene 15160 18943 . - . ID=g8629;Name=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS mRNA 15160 18943 . - . ID=g8629.t1;Parent=g8629;Name=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 18621 18943 . - . ID=g8629.t1.exon1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 18621 18943 . - 0 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 18082 18395 . - . ID=g8629.t1.exon2;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 18082 18395 . - 1 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 17748 17876 . - . ID=g8629.t1.exon3;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 17748 17876 . - 2 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 17375 17495 . - . ID=g8629.t1.exon4;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 17375 17495 . - 2 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 17089 17148 . - . ID=g8629.t1.exon5;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 17089 17148 . - 1 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 15978 16857 . - . ID=g8629.t1.exon6;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 15978 16857 . - 1 ID=cds.g8629.t1;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS exon 15160 15627 . - . ID=g8629.t1.exon7;Parent=g8629.t1 NODE_6_length_79858_cov_50.7929 AUGUSTUS CDS 15160 15627 . - 0 ID=cds.g8629.t1;Parent=g8629.t1 #PROT g8629.t1 g8629 MAPALARRKRGDSLCCRRGRLWSAMFSLHALATLLHLVSVCNGIKIKSKDYSAEQIWSHVKEPMAVRFAPDERVYVSTKAGIIWEFESISDPTGRVIVDLSEQVYDYWDRGMLGLAVHPQFPQMPYLYVLYTGDSAANGPLTPPLYNDRCVDGSGLCQASIVLSRIALDGEETVMYHGNCHSSPSHNAGEVFFVPGESPPALYVSLGDGAHFDYIDTGQTDTCGLQPGGAFRAQDGSHLYGAILRVDPMTGLGMKGNPFDIGVDSRIYARGLRNPYRIGVDTFNNRNDLYIGDVGWATWEEINVIPSGTKTLLNFGWPCYEGNVINDPYASLNLPVCRTLLNSGIDVKPWYVYNHNKVSLAAGDDGCSAPGESSVTSMAVNDPNRGGIPDATAGALFFGDYARKCMWYFPRSKDGTVSKTPTFFAKAVEITDLVFHGGIMYVTEVMKNSIWAVKNVKVTVQPTRAIVTASAVFGVAPMTVTFDGSQSVGNTALTFAWANAVGGAYSADGSVISRTFSSPGTYTVGLKVATTTGSSATASVVVVVVQSLVLSIPQPRYNLDRWRVGDTVPVAALAAYDGKNADPVAMQITMKMRHCMYDGCSLRFGTCHEHLIEQFALSERASFNVPNHEYPSMIVVQLAATFTLVDGSTATQTKQIEFIPHVAQIIVRSNPPGLTMLVSNRYCVSPCEVHALAGGYVNIVAISNQKLGSLTYAFSAWSDGSTVASRSMDVGRDTTSMEITAQFQKTLVTAIDIAAVNICPSNYV* # ORIGINAL: g1096.t1 original gene structure, not modified by PASA NODE_886_length_16260_cov_40.2261 AUGUSTUS gene 6476 9765 . + . ID=g1096;Name=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS mRNA 6476 9765 . + . ID=g1096.t1;Parent=g1096;Name=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 6476 7244 . + . ID=g1096.t1.exon1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 6476 7244 . + 0 ID=cds.g1096.t1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 7500 7584 . + . ID=g1096.t1.exon2;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 7500 7584 . + 2 ID=cds.g1096.t1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 7716 7779 . + . ID=g1096.t1.exon3;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 7716 7779 . + 1 ID=cds.g1096.t1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 8058 9059 . + . ID=g1096.t1.exon4;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 8058 9059 . + 0 ID=cds.g1096.t1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 9209 9455 . + . ID=g1096.t1.exon5;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 9209 9455 . + 0 ID=cds.g1096.t1;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 9605 9765 . + . ID=g1096.t1.exon6;Parent=g1096.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 9605 9765 . + 2 ID=cds.g1096.t1;Parent=g1096.t1 #PROT g1096.t1 g1096 MMEVSATRTAPHSDSPSRKHSLKTSNGSHSNHSRNETRQANATFDLSKLLEDGRDGGGIDMSAIDEFRLSVFSRLKGITSGLRQEQDRIEQHLRMAQALVHNQSDESNILSSDNHEAEHLKQSQIKERARLEDRLRAEAEELIEAEEVQRTQARLWAKVKALTERIHDLEEAREIESASRNRLTQKRNAFESKIGHLETRQMNQRKQLAEAQSRQETSTQQISELENKHMSDRDKASLAKLDRLFAEHHKVIQRKQAEQLRECQLLEQKHTAVEFEIEFRTAEEREMLVAEQKVQLLQTISGQRKELEDEKDRMGEQHQAIEALQSREMQRLQSQQLSHSQTRQSRELTRLQRGQAKIRDRARKHEIADQYSEFVQGQSDTDGASSTHDSSSFFASSATDSRAHSERATSEDARSEGRSEGGAEGEQDEADAEAKRREALADRNRQRNAAEDDQRSLIDQQKLEAASKLEQNRLNIVALGRRQQRVIEELRHQQRDEMAQFDKDATRALSDCKQQQETDLKTLKTDHAREMDEAISQQQREADTLRSAEEVELRLTKQLEDEKQITNRILHQLLPKTIAEDLKCGRRIEPETFESVTIFFSDVCGFTQLTARSNPLQIVALLNRLYTTFDGILDKFDAYKVETIGDAYQVVSGLPIRNGNRHAFVIADLALALRDAIDTIDLSDQETDKLTLRIGMHTGECLAGVVGVSMPRYCLFGETVVTAQRMESSGEALKIHVSPVTLEIIKDAYNFETRAGKGVDIGGQKLQTSWLLSKK* # PASA_UPDATE: g1098.t1, single gene model update, valid-1, status:[pasa:asmbl_9826,status:3], valid-1 NODE_886_length_16260_cov_40.2261 . gene 13301 15081 . + . ID=g1098;Name=g1098.t1 NODE_886_length_16260_cov_40.2261 . mRNA 13301 15081 . + . ID=g1098.t1;Parent=g1098;Name=g1098.t1 NODE_886_length_16260_cov_40.2261 . five_prime_UTR 13301 13455 . + . ID=g1098.t1.utr5p1;Parent=g1098.t1 NODE_886_length_16260_cov_40.2261 . exon 13301 15081 . + . ID=g1098.t1.exon1;Parent=g1098.t1 NODE_886_length_16260_cov_40.2261 . CDS 13456 14838 . + 0 ID=cds.g1098.t1;Parent=g1098.t1 NODE_886_length_16260_cov_40.2261 . three_prime_UTR 14839 15081 . + . ID=g1098.t1.utr3p1;Parent=g1098.t1 #PROT g1098.t1 g1098 MDASGDSRPANEQGDATEPDAGSQRGNAQADVDGSSARREVRGRDEQEGGDDSERVAVKRGRWNDDASQVPVAAPQLQRVTSFGVEKKRAANAQQRSRPYFPALYGCRSVDVYERLNLIDEGTYGVVSRAKDTATGEIVALKKLKMEKEKEGFPITSLREINTLLRGKHENVVGVREIVVGGNMDSIYLVMEFVEHDLKALMETMKQPFLQSEVKTLMLQLLRGIGYLHDNWIVHRDLKTSNLLLSNGGILKIADFGLAREYGDPLRPMTPLVVTLWYRAIELLLGAKEYSTPIDMWSVGCIFAEFLTQKPLFQGNGELNQIQSIFKVLGTPNDKIWPGFQQLPNVKKVTFAQGFSTLNSRFPHDRPPYLTSTGLNLLHGFLRFDPARRLSAEEALKDPYFTENPLPIDPSMFPTWPAKSEGMRKRTASPSAPEGGAGYAREFEVEAQNLFNVQPQGSNL* # PASA_UPDATE: g1097.t1, single gene model update, valid-1, status:[pasa:asmbl_9827,status:3], valid-1 NODE_886_length_16260_cov_40.2261 . gene 10374 12931 . - . ID=g1097;Name=g1097.t1 NODE_886_length_16260_cov_40.2261 . mRNA 10374 12931 . - . ID=g1097.t1;Parent=g1097;Name=g1097.t1 NODE_886_length_16260_cov_40.2261 . five_prime_UTR 12892 12931 . - . ID=g1097.t1.utr5p1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . exon 12862 12931 . - . ID=g1097.t1.exon1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . CDS 12862 12891 . - 0 ID=cds.g1097.t1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . exon 12145 12464 . - . ID=g1097.t1.exon2;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . CDS 12145 12464 . - 0 ID=cds.g1097.t1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . exon 11785 11972 . - . ID=g1097.t1.exon3;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . CDS 11785 11972 . - 1 ID=cds.g1097.t1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . exon 10374 11517 . - . ID=g1097.t1.exon4;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . CDS 11330 11517 . - 2 ID=cds.g1097.t1;Parent=g1097.t1 NODE_886_length_16260_cov_40.2261 . three_prime_UTR 10374 11329 . - . ID=g1097.t1.utr3p1;Parent=g1097.t1 #PROT g1097.t1 g1097 MATQVSKKRKFIADGVFFAELNELLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEKGRRIRELTAVVQKRFNFPDGSVELYAEKVANRGLCAVAQCESLRYKLLGGLAVRRACYGVLRFIMENGAKGCEVIVSGKLRAQRAKSMKFSDGFMVHSGQPTRDYMDTAVRHVLLRQGVLGIKVKIMLPFDPSGKTGPKIPLPDMVTILEPKEESIPERPLSENKVYKEAAPAAVQAQA* # PASA_UPDATE: g1095.t1, single gene model update, valid-1, status:[pasa:asmbl_9829,status:3], valid-1 NODE_886_length_16260_cov_40.2261 . gene 2123 5315 . + . ID=g1095;Name=g1095.t1 NODE_886_length_16260_cov_40.2261 . mRNA 2123 5315 . + . ID=g1095.t1;Parent=g1095;Name=g1095.t1 NODE_886_length_16260_cov_40.2261 . five_prime_UTR 2123 2431 . + . ID=g1095.t1.utr5p1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . exon 2123 2925 . + . ID=g1095.t1.exon1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . CDS 2432 2925 . + 0 ID=cds.g1095.t1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . exon 3046 3224 . + . ID=g1095.t1.exon2;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . CDS 3046 3224 . + 1 ID=cds.g1095.t1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . exon 3581 4030 . + . ID=g1095.t1.exon3;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . CDS 3581 4030 . + 2 ID=cds.g1095.t1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . exon 4366 5315 . + . ID=g1095.t1.exon4;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . CDS 4366 5216 . + 2 ID=cds.g1095.t1;Parent=g1095.t1 NODE_886_length_16260_cov_40.2261 . three_prime_UTR 5217 5315 . + . ID=g1095.t1.utr3p1;Parent=g1095.t1 #PROT g1095.t1 g1095 MASSAALATSAAASLASVASSLLSSALPSASHRPPPADGFPFATPLPPPPPPSFDDSGCPVPYCGINCTITYADDLGSIYYSYNYFILALMSGLFGLSALWLYRVIQWRGWRRRCRQRTILAHLLVSTFLMVIRNIDLQGWQGVYSEPVYHGMYGCSVACQYLLIFAVVHGMSVVSLTQAGRQREIVMMNRLYLASLVVVPPVIIALSVQIAFHSAWPWGTARLAFTIIITLIWAIINIACTVILYRFIFSSSRAFALSQGTIALGGDALEPGLDRITPTGGAEKSNFANPLRRFSIRQQNPPPVERSDSSGRRLSISQSGLVYSDRRASIQLQLQVPGGRTARHTFMLRKVFLFLAGSSLMGAVVVGMQAYVLVAYWLRNKYNNYPKPDKRELMWTILFQMAELMLIIFTFYFFRPLSEDDMRNKRNFAGKLLNTSASDGSVGRPDSKHQVRSDASAVNEEDEDPTDMRTSSISVSETSDVPLADVTRSRGVSVSLVGLDGRDLDPQEALVRRTNMRSAEKQSRLLSFIEEGGEEDEVDGGFFARMGIELPPSEPVQSPDSLNSSSAESDMRSLFLSRRRASADDSASGRRRSLGEILSFNRNGGERRGSSGDIERRRSSVGDVISRFVGSSSRLSRSNPDNLDSAPDPELSVVVE* # ORIGINAL: g1094.t1 original gene structure, not modified by PASA NODE_886_length_16260_cov_40.2261 AUGUSTUS gene 107 1724 . + . ID=g1094;Name=g1094.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS mRNA 107 1724 . + . ID=g1094.t1;Parent=g1094;Name=g1094.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 107 215 . + . ID=g1094.t1.exon1;Parent=g1094.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 107 215 . + 0 ID=cds.g1094.t1;Parent=g1094.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS exon 403 1724 . + . ID=g1094.t1.exon2;Parent=g1094.t1 NODE_886_length_16260_cov_40.2261 AUGUSTUS CDS 403 1724 . + 2 ID=cds.g1094.t1;Parent=g1094.t1 #PROT g1094.t1 g1094 MNVLYWTSLLIVPPMMLFLSIEITNGPAWLWGTARMGLTMALTFLWSGIHVASTIRLYHIITTSRRAIASGGSKHSVTAMGGPALHAGFDEDARTPVEGDIAPDGQHAYANPLRGLPGVAAAGAQTAAASSEIVASPPAPRSRPSSAAANSARTSTISISSAQRIQSGIVYAGMSASAQLQGGKSRSVRHDVMLRKVFRFLVVTSMLEIGVLGMQGYVILTYIWLKPIAHEYDEVPTYERFIWNVLFESAEMLLLVVSLYFFRPLAPHEMRNTRNFAGKFLLRADKKVSLEAGDSLSSLGSEGRAQMDGAERTSTCPEQDSGYHVVPTTGAVYGLSAASTGKCGGSAHIEADTEPTPTRLLSFIEEDGEESTSDDAMSQEMEMARSDMGSSETSHKGQGNATDSALQPMIRRRSCDWDGGATNDFDEEPTRRRRSSLGDVLARIASAVSSAATIGVAGRRESQGSVRIYDEEEESL* # PASA_UPDATE: g2733.t1, single gene model update, valid-1, status:[pasa:asmbl_7493,status:12], valid-1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . gene 99 1294 . + . ID=g2733;Name=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . mRNA 99 1294 . + . ID=g2733.t1;Parent=g2733;Name=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . exon 99 530 . + . ID=g2733.t1.exon1;Parent=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . CDS 99 530 . + 0 ID=cds.g2733.t1;Parent=g2733.t1;5_prime_partial=true NODE_4640_length_1381_cov_35.356_potentialcontaminant . exon 706 819 . + . ID=g2733.t1.exon2;Parent=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . CDS 706 819 . + 0 ID=cds.g2733.t1;Parent=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . exon 1130 1294 . + . ID=g2733.t1.exon3;Parent=g2733.t1 NODE_4640_length_1381_cov_35.356_potentialcontaminant . CDS 1130 1294 . + 0 ID=cds.g2733.t1;Parent=g2733.t1 #PROT g2733.t1 g2733 LPSLLHVEAGGTFSRTFLTAVRTSVDSENPTADVQADFDSAHTTASNTDGSKNTNNNKSSSNNNNNSECGSLLTCTSLLDEHVAAWEVIWEARMEVGGNAVLGAQINASMYAILSSARSDLPYPAGTAAISNNNYWGHIFWDFYWYMAPLIHFHPSVAVRTFDYFFTRMDEAKTYAVKEGYKGCLFPWENAKTGHEVDLVPQVNILEVHSVSSIALFTKRCVGSRHSCYARRVVLL* # ORIGINAL: g2877.t1 original gene structure, not modified by PASA NODE_4895_length_1157_cov_30.232_potentialcontaminant AUGUSTUS gene 2 482 . + . ID=g2877;Name=g2877.t1 NODE_4895_length_1157_cov_30.232_potentialcontaminant AUGUSTUS mRNA 2 482 . + . ID=g2877.t1;Parent=g2877;Name=g2877.t1 NODE_4895_length_1157_cov_30.232_potentialcontaminant AUGUSTUS exon 2 482 . + . ID=g2877.t1.exon1;Parent=g2877.t1 NODE_4895_length_1157_cov_30.232_potentialcontaminant AUGUSTUS CDS 2 482 . + 1 ID=cds.g2877.t1;Parent=g2877.t1 #PROT g2877.t1 g2877 RKEKKEKKERKPSPLSEQDAGEDNNDVKGCDAADSSTQAAADADGDAGVIDGDRASSSHRKKKSKKEKKDRKEKKEKKRRRREAEGSDKDDSDGPDNNNNNNDDDNVDAGNGRGTTGTMSIGKRASFGESESDDDRRPNPLVAHVIERPSHGPASDSSN* # ORIGINAL: g13037.t1 original gene structure, not modified by PASA NODE_3454_length_3427_cov_47.2285 AUGUSTUS gene 34 1921 . - . ID=g13037;Name=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS mRNA 34 1921 . - . ID=g13037.t1;Parent=g13037;Name=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS exon 1556 1921 . - . ID=g13037.t1.exon1;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS CDS 1556 1921 . - 0 ID=cds.g13037.t1;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS exon 676 1319 . - . ID=g13037.t1.exon2;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS CDS 676 1319 . - 0 ID=cds.g13037.t1;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS exon 476 544 . - . ID=g13037.t1.exon3;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS CDS 476 544 . - 1 ID=cds.g13037.t1;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS exon 34 186 . - . ID=g13037.t1.exon4;Parent=g13037.t1 NODE_3454_length_3427_cov_47.2285 AUGUSTUS CDS 34 186 . - 1 ID=cds.g13037.t1;Parent=g13037.t1 #PROT g13037.t1 g13037 MIPGVQCNGYNRSAALLKLGDANEALADAHKAIACDPSYAKAHARAALALHVISQTEQRAESATCRAAVAISLDIGLASMVSSVFALSPITVQDGPSLVHAAMSAPPGSVIVVSGNFWCQMPVIVANDVSIVGVRLGISATLPCVDATFTPRGTCHLEDIAVTCNQHCIYLIAPGTKASVYRCELRGLGDRACVVAEAGTVTVTGTLITCPSAGGILAAGNRAVVVARQCDIVGCGIGDEPRNQASGVEARQGGRCIVEGTRVANCGKGALVWQGAAGTLMVDCDIVSHLSEGVLSCMASGLVLRNCRISDCASFGVSLDARVADCRIDHCEIANNGAWGVFIKGMSNAVVDSCTVTGNKTGGIFIGVNYRANVSLMRNVVKGSPKPFKDECGDGRGGPSAQFKQFIALA # ORIGINAL: g3060.t1 original gene structure, not modified by PASA NODE_13563_length_258_cov_27.8415_potentialcontaminant AUGUSTUS gene 90 225 . + . ID=g3060;Name=g3060.t1 NODE_13563_length_258_cov_27.8415_potentialcontaminant AUGUSTUS mRNA 90 225 . + . ID=g3060.t1;Parent=g3060;Name=g3060.t1 NODE_13563_length_258_cov_27.8415_potentialcontaminant AUGUSTUS exon 90 225 . + . ID=g3060.t1.exon1;Parent=g3060.t1 NODE_13563_length_258_cov_27.8415_potentialcontaminant AUGUSTUS CDS 90 225 . + 1 ID=cds.g3060.t1;Parent=g3060.t1 #PROT g3060.t1 g3060 ETLFNDEKLTQFQAHEFQIALVWATQANTIPAVFWSLLYIYTST* # PASA_UPDATE: g8816.t1, single gene model update, valid-1, status:[pasa:asmbl_1666,status:12], valid-1 NODE_145_length_35078_cov_44.5193 . gene 44 2166 . + . ID=g8816;Name=g8816.t1 NODE_145_length_35078_cov_44.5193 . mRNA 44 2166 . + . ID=g8816.t1;Parent=g8816;Name=g8816.t1 NODE_145_length_35078_cov_44.5193 . five_prime_UTR 44 45 . + . ID=g8816.t1.utr5p1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . exon 44 207 . + . ID=g8816.t1.exon1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 46 207 . + 0 ID=cds.g8816.t1;Parent=g8816.t1;5_prime_partial=true NODE_145_length_35078_cov_44.5193 . exon 423 473 . + . ID=g8816.t1.exon2;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 423 473 . + 0 ID=cds.g8816.t1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . exon 728 793 . + . ID=g8816.t1.exon3;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 728 793 . + 0 ID=cds.g8816.t1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . exon 1020 1091 . + . ID=g8816.t1.exon4;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 1020 1091 . + 0 ID=cds.g8816.t1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . exon 1286 1319 . + . ID=g8816.t1.exon5;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 1286 1319 . + 0 ID=cds.g8816.t1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . exon 1544 2166 . + . ID=g8816.t1.exon6;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . CDS 1544 1548 . + 2 ID=cds.g8816.t1;Parent=g8816.t1 NODE_145_length_35078_cov_44.5193 . three_prime_UTR 1549 2166 . + . ID=g8816.t1.utr3p1;Parent=g8816.t1 #PROT g8816.t1 g8816 EFGWIIMVKDIEEFGRGKIHANRGIVTFSMRYTAVVFRPFKGEVVEAVVKDVNKLGVFCQVGPIEIFISNKQMPPKMKYLPNAVPHCYVSPDEDYTIVKDVPIKVKIVGLRIDAANVVCIGSILDEFLG* # ORIGINAL: g8817.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 2487 3509 . - . ID=g8817;Name=g8817.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 2487 3509 . - . ID=g8817.t1;Parent=g8817;Name=g8817.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 2487 3509 . - . ID=g8817.t1.exon1;Parent=g8817.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 2487 3509 . - 0 ID=cds.g8817.t1;Parent=g8817.t1 #PROT g8817.t1 g8817 MSCLSSDDPAARRRQLFTELFGSDSESEGDEDTVLAQCNVAALAPSSGDGCSFPGLSSDEVVKSDAAHHMQSYARRRVECAVCGGGQVSLRRIMNLSHIPHISATYEEESFMPPAGLVLDDVSVDQCVGGVKGLSLVRRAVTPHEQSLMLATIDDCLRFFPTRDQNQSMRFGDLPGIARWLERRVLALCTAGAPADGVMPQSLAARRPLFDQMISNLYHPGEGITSHVDLLKFEDGIVALSLASACVMDFRPTRALSGASCCGDLMPITTASLHPGESIASEPFGVLLSPGDLVVLCGGARYEWEHGIAERDCDVWSAKAIQRGHRVSVTLRKLTEAACS* # ORIGINAL: g8825.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 33071 34960 . + . ID=g8825;Name=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 33071 34960 . + . ID=g8825.t1;Parent=g8825;Name=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 33071 33149 . + . ID=g8825.t1.exon1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 33071 33149 . + 0 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 33309 33435 . + . ID=g8825.t1.exon2;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 33309 33435 . + 2 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 33568 33784 . + . ID=g8825.t1.exon3;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 33568 33784 . + 1 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 33983 34081 . + . ID=g8825.t1.exon4;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 33983 34081 . + 0 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 34200 34249 . + . ID=g8825.t1.exon5;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 34200 34249 . + 0 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 34388 34466 . + . ID=g8825.t1.exon6;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 34388 34466 . + 1 ID=cds.g8825.t1;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 34559 34960 . + . ID=g8825.t1.exon7;Parent=g8825.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 34559 34960 . + 0 ID=cds.g8825.t1;Parent=g8825.t1 #PROT g8825.t1 g8825 MERAGESTLSLGSVRLRTTRLNLLDGAFCDDEFGLACTDGSCVWIEQGVSISGASLTSQGRFHIAGDFKDISSLSWSAPIPTPHKDEDVTRILAVVAGANVHLHLVQSTARRVRSASAVACLKGSLRLLAASWHSRICALAVCDFDGVTIHAALEDASGHGFSFESRRIPSLAKARVGCCSWSPCGMEVLMGTDGGLQLFSWSGSEAAAEVLKGEFTTCVMSLPPGVGRVGAVAVDRLHIPQTATEAGDYFRVACATEAPQGSIASGASDLFETAFAASTSSFSFSSSNGTVCAPIAEIAQVEGGEVAVDVRGVGSSVGGRSSAVMSVGRSAMFTAFGGGRDASSLVLQRK # ORIGINAL: g8821.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 23191 24640 . + . ID=g8821;Name=g8821.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 23191 24640 . + . ID=g8821.t1;Parent=g8821;Name=g8821.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 23191 24170 . + . ID=g8821.t1.exon1;Parent=g8821.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 23191 24170 . + 0 ID=cds.g8821.t1;Parent=g8821.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 24301 24640 . + . ID=g8821.t1.exon2;Parent=g8821.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 24301 24640 . + 1 ID=cds.g8821.t1;Parent=g8821.t1 #PROT g8821.t1 g8821 MLVCMGVLSFALGFGLASTASLPYVSDIFKAIVPSTGAHDAEDGAPIPVDDNAPQHMGEPPPLHGVVIAHPTASSLLHGGVGRAGHVTSENKTPPSRIPRIAHLIKIDGGRPFTLLHWLVVRAIASRVRPNELQFHVDVEPKGEWFERARPFVSMRLLNATVYKQRLADKGHANARPEHLADFARYDILATTGGAYFDLDAIPLRSFDRLFESGFDNVLGLESDGYVAVGLILAANGSALFKDMVSIGMQKFDGGWSTHSVLLISDLWQRYANDTLVLPHWALFPLSWSPASLAELYEENAPRMDWRKSYALHCYNSRAVEVSKTYKSISIAWLLSSQSNFARAVRPIVLEALEAGEIPDPRKPPNVSTADTASTASAPTARAVTWLPTVSILSPPLPTSASAHEPLASQYPSTQKDSLQLHAPAITLAPTATSKSTTH* # PASA_UPDATE: g8819.t1, single gene model update, valid-1, status:[pasa:asmbl_1669,status:12], valid-1 NODE_145_length_35078_cov_44.5193 . gene 11375 18599 . + . ID=g8819;Name=g8819.t1 NODE_145_length_35078_cov_44.5193 . mRNA 11375 18599 . + . ID=g8819.t1;Parent=g8819;Name=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 11375 12144 . + . ID=g8819.t1.exon1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 11375 12144 . + 0 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 12548 13104 . + . ID=g8819.t1.exon2;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 12548 13104 . + 1 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 13310 13477 . + . ID=g8819.t1.exon3;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 13310 13477 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 13939 14070 . + . ID=g8819.t1.exon4;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 13939 14070 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 14189 14266 . + . ID=g8819.t1.exon5;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 14189 14266 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 14387 14470 . + . ID=g8819.t1.exon6;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 14387 14470 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 14660 15292 . + . ID=g8819.t1.exon7;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 14660 15292 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 15600 15733 . + . ID=g8819.t1.exon8;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 15600 15733 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 15905 16059 . + . ID=g8819.t1.exon9;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 15905 16059 . + 0 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 16344 16446 . + . ID=g8819.t1.exon10;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 16344 16446 . + 1 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 16616 16744 . + . ID=g8819.t1.exon11;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 16616 16744 . + 0 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 17031 17125 . + . ID=g8819.t1.exon12;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 17031 17125 . + 0 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 17397 17569 . + . ID=g8819.t1.exon13;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 17397 17569 . + 1 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 17805 17905 . + . ID=g8819.t1.exon14;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 17805 17905 . + 2 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . exon 18246 18599 . + . ID=g8819.t1.exon15;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . CDS 18246 18380 . + 0 ID=cds.g8819.t1;Parent=g8819.t1 NODE_145_length_35078_cov_44.5193 . three_prime_UTR 18381 18599 . + . ID=g8819.t1.utr3p1;Parent=g8819.t1 #PROT g8819.t1 g8819 MGKAPTLKSLNLNPALYTLSFARSFARLWLGPRTKRLRFPSLSFLASGGAPSTDVVSSFSSTRAEGFAQAGGSLYYTGNGHGSVSNSTFTASRAVNRGGCIYADPSDDEGGMQISISTSSFTSCSALSGGAVLLENCVATISDSVFTNNTAAGTGGIEVWFANGPRFAAAGAVNGTPWTLLNRVVMTGNRASSSYGGGLTLLMFAPDYTRPDVAVIDVRADGNRGAFGGFMNAESDVNITVRGLKATANTARAGGAIFIGRAARLTLADSVISGSRASSRGGAMGVTGDSYLGMNNVHITRNQAEESAGGVALQGQTSLVAYNVTADQNIAASSGGFLVLSDDAHGVIEDSLIANNSARQHGGALHVTSGASLTLSGCMLVDNCAQSGGGAIASAGTATVTITNTTLNRNAALEGGAAIATESSAMSLRSVEVVGNVVVRSGGGIAVTDSASFDALSSTFHDNGGPSVETGGCISIIGFASISLTNASLYSCAANRGGGLYARNGLAGIVPCNRLEVLSPNDALAIALVNVSIADCSALHEGGGIFSDSSHATLNTVSISNCTAENGGGAYVAGVAGASLLTDVLVSDCTALQNGGAFHVGDSNITAITIASLLMLNNKASIGGGIYAHDAPSDLIGVSASGNAASLYGDDLGTRPTRIVAASPADISVYSGSILPSFEMQLLDATGGPAKRAGILSLIVRAASSLSSQAQGSTAASPSQYTARSVDAAQEVVVPLVQNAKQALDGNARSVFSGARITAPPGVYTATVLLEDGVDIVPSTFTITLLECESGRTEMVMDGAQYPACLKEFDLNMQLRIALAVMSAIGECFALFIGIFVFVNRTHKIFKAASPNFCLAVVVGCMMMYAVIFTLVPAATTPVCTVHIWLGHVAFALGFGALFAKTLRIMSIFNNKKLSHKLRQGTNKFLYTLVSFIVCTFVVYLTLWTILDRPSENASISDNEVLTRLCRSESSVWVIVVYCAEGLMLCWGTYLAWRTRNAPSKFRESKYIGFAIWTIGLIIGIVLPLNYAVAIQNPDTQFLFTSIGILATTTGTLLFVFGPKIYAFYASRGKSVNSETDTKDATSSASVSYLENSQQQDTRIMQLQDEIVRLQRQLADLADVKDRQLAEYMARLDNVIYDAYSMRFISVV* # ORIGINAL: g8820.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 18904 21939 . - . ID=g8820;Name=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 18904 21939 . - . ID=g8820.t1;Parent=g8820;Name=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 21821 21939 . - . ID=g8820.t1.exon1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 21821 21939 . - 0 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 21311 21443 . - . ID=g8820.t1.exon2;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 21311 21443 . - 1 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 20628 20945 . - . ID=g8820.t1.exon3;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 20628 20945 . - 0 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 20197 20412 . - . ID=g8820.t1.exon4;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 20197 20412 . - 0 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 19895 19993 . - . ID=g8820.t1.exon5;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 19895 19993 . - 0 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 19505 19602 . - . ID=g8820.t1.exon6;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 19505 19602 . - 0 ID=cds.g8820.t1;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 18904 19186 . - . ID=g8820.t1.exon7;Parent=g8820.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 18904 19186 . - 1 ID=cds.g8820.t1;Parent=g8820.t1 #PROT g8820.t1 g8820 MDVAASTCSEQHFAHLSLPRSAPSVATWTSAWNASQQVPSVVAGNQMAVFDEDWTAVEECALIDAIEQYGFGNWPDIAEHVKTKTAKECEIHYQEVYLAPPTAPLPDTSATRPLLRTAASARAEMQKAKALVSQRNQQLASAPSHVLGPECAGYMPLRGDFEFEYDNEAESLVKDMMFADEDTQLEKEVKVAVFDMYNKRVDQRVRRRQVVAEHSLVELKKLQAIDKKASKEEKDAREHLKPFMQLQPADKHQKMVQALVSEQMLRVRIRQLREWRENGITTTVGGELYEQEKKKRESDRQQRKSSVLAMSANRRVGLLQRRREDDDRSGSGAFRGRKPATPLDVNNLPGVELLSAGETELCSAVRLQPKQYLGIKAMLMKEGEKVGVLKLAQARVLVRIDVNKTRRIYDFMVQSGWIKNA* # PASA_UPDATE: g8824.t1, single gene model update, valid-1, status:[pasa:asmbl_1670,status:3], valid-1 NODE_145_length_35078_cov_44.5193 . gene 30515 32722 . + . ID=g8824;Name=g8824.t1 NODE_145_length_35078_cov_44.5193 . mRNA 30515 32722 . + . ID=g8824.t1;Parent=g8824;Name=g8824.t1 NODE_145_length_35078_cov_44.5193 . five_prime_UTR 30515 31093 . + . ID=g8824.t1.utr5p1;Parent=g8824.t1 NODE_145_length_35078_cov_44.5193 . exon 30515 32722 . + . ID=g8824.t1.exon1;Parent=g8824.t1 NODE_145_length_35078_cov_44.5193 . CDS 31094 32632 . + 0 ID=cds.g8824.t1;Parent=g8824.t1 NODE_145_length_35078_cov_44.5193 . three_prime_UTR 32633 32722 . + . ID=g8824.t1.utr3p1;Parent=g8824.t1 #PROT g8824.t1 g8824 MLSGTKAARPRAFHSNMHRSQVANLSAFAVLLISTTCAVRSHALEIQGVKQPSNNNEDVDPDSAHSVKHVVIIGIDGLGSEYIHSLEGQMPNVHSFVASQGLYIERSRALFPFVSIPNWASFFVSRPPSHTGITGNVPPYTGKPLVPEGTFPLPGLRFPSLPESVRKHIPGARFLYVTEHQHLAKYLFDDEDLGVQDPVSPGFLQRLFNPHATPGLASFACSSYLRKYASLLYSGFCAEIAERKVRSHLKAHGIPALSFVQINIVDATGHMAGWGSAEYEDAISYADAQIGGVLRAFHETSPTFYEDSAIFVISDHGGKDRTHGDDNPPNEAVPLVVRGGGFPRGCTLRGWTNVTSLDIAPTVAHMLGIPRNPLWMGRDLFVSGPVMEACESTANANSNDGGEESRLSGHKRDVGRRFTEPDVDETERWTNYTNTASRPSDVRTYSVKYASEDTERSLIIACAVLGALVLTNILVFIGLGFVLARRMRRRCVRNKESPSQQALSENIAMESV* # PASA_UPDATE: g8823.t1, single gene model update, valid-1, status:[pasa:asmbl_1667,status:12], valid-1 NODE_145_length_35078_cov_44.5193 . gene 27807 30218 . + . ID=g8823;Name=g8823.t1 NODE_145_length_35078_cov_44.5193 . mRNA 27807 30218 . + . ID=g8823.t1;Parent=g8823;Name=g8823.t1 NODE_145_length_35078_cov_44.5193 . five_prime_UTR 27807 27854 . + . ID=g8823.t1.utr5p1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 27807 27962 . + . ID=g8823.t1.exon1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 27855 27962 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 28196 28297 . + . ID=g8823.t1.exon2;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 28196 28297 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 28428 28536 . + . ID=g8823.t1.exon3;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 28428 28536 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 28675 28793 . + . ID=g8823.t1.exon4;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 28675 28793 . + 2 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 28962 29027 . + . ID=g8823.t1.exon5;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 28962 29027 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 29214 29305 . + . ID=g8823.t1.exon6;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 29214 29305 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 29441 29642 . + . ID=g8823.t1.exon7;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 29441 29642 . + 1 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . exon 29862 30218 . + . ID=g8823.t1.exon8;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . CDS 29862 30029 . + 0 ID=cds.g8823.t1;Parent=g8823.t1 NODE_145_length_35078_cov_44.5193 . three_prime_UTR 30030 30218 . + . ID=g8823.t1.utr3p1;Parent=g8823.t1 #PROT g8823.t1 g8823 MTTLVLQVPKAAHFKIVGKGGEVAKHLEETFGIKIKVPERDSPSIEVALLGDANRVLQAQQEIGRLIGFKVGPDSIATAQYNIATASYGAIIGKGGETIRRLQTVSGCCIDLPRQDAPPPQNLRITGSRANIAIAEAEIEKLLSQGLKRIAIDEQAASKPKPKKDITSKPINLALFFPDTNASDGWNFDIFLDYLGSATKALDICVFTITDDRIANAIQEAHLTGIRVRIITDNDTVSNVGSDIARLRKMGVAIKVDKTAKLMHHKFAVVDGALLLNGSLNWTRAASNDNYENVMITNAREFVTAFQKEFDRMWSDTANFH* # ORIGINAL: g8822.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 24870 27363 . - . ID=g8822;Name=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 24870 27363 . - . ID=g8822.t1;Parent=g8822;Name=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 26032 27363 . - . ID=g8822.t1.exon1;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 26032 27363 . - 0 ID=cds.g8822.t1;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 25659 25742 . - . ID=g8822.t1.exon2;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 25659 25742 . - 0 ID=cds.g8822.t1;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 25354 25468 . - . ID=g8822.t1.exon3;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 25354 25468 . - 0 ID=cds.g8822.t1;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 25098 25210 . - . ID=g8822.t1.exon4;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 25098 25210 . - 2 ID=cds.g8822.t1;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 24870 24911 . - . ID=g8822.t1.exon5;Parent=g8822.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 24870 24911 . - 0 ID=cds.g8822.t1;Parent=g8822.t1 #PROT g8822.t1 g8822 MLSDNEEGNGRTSPSSDEERSDSNERSTNSSDSGDESAAHNRPVDNAIDNDGDKSAGDASASERDREGGNDRDDASASAMNADRSNVDREDEDGASYTDAAILLGYHDYQLLLRALVALEAQRAQVLKDIDALAATKTSATADPLAFADALRRRALRFPEPQRVVAVPPVDMSILSSHGHMTRSQMGTIPGGKRRETPHQPSRLSSLKTEPQSPAVSPSPAVSAVAGGSGGGEGPLRSPTGGHPGHLSAALQSASDSQVVQAALPQRIGVITSSLSQATAQVSFRGPDGHEATLLREPRPGELVRGRYYDPAKPRTFNLPWTAEEQAHLEELLVRFPSEEVETNRFLKISREMKTRTPRQVASRVQKFFIKLAKAGLPVPGRVPNYAAHARSRPVTKRKRGGGGGGAGYESYAAPEVPMSDDDDDGGSNDESMDPSVRDSEDYKELVRLRRLKKKRAREQTVTMDSAHLGYRCDGCGMDPIVGVRWKCLECPEENEIDLCEGCYGKQWENDIHLKDHKLEKIATPEAPYFMDDAYTNFFEGDYNYLDPNFIPTANREHDRD* # ORIGINAL: g8818.t1 original gene structure, not modified by PASA NODE_145_length_35078_cov_44.5193 AUGUSTUS gene 4344 8090 . + . ID=g8818;Name=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS mRNA 4344 8090 . + . ID=g8818.t1;Parent=g8818;Name=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 4344 4534 . + . ID=g8818.t1.exon1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 4344 4534 . + 0 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 4820 5592 . + . ID=g8818.t1.exon2;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 4820 5592 . + 1 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 6001 6162 . + . ID=g8818.t1.exon3;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 6001 6162 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 6317 6508 . + . ID=g8818.t1.exon4;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 6317 6508 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 6711 6785 . + . ID=g8818.t1.exon5;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 6711 6785 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 7010 7081 . + . ID=g8818.t1.exon6;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 7010 7081 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 7315 7365 . + . ID=g8818.t1.exon7;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 7315 7365 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS exon 7807 8090 . + . ID=g8818.t1.exon8;Parent=g8818.t1 NODE_145_length_35078_cov_44.5193 AUGUSTUS CDS 7807 8090 . + 2 ID=cds.g8818.t1;Parent=g8818.t1 #PROT g8818.t1 g8818 MSCSVAAVSLVTLVHVLVALISLADAVPCPSWIFLGATAWTPVAGINASAFSFSCGVAQMQVADLGTVEFSPECDDGPPMSSVIDVTFNYTFPASLSRLVSYARVYRSDDTTTGTQRLSFSLSRPGIADVTTAASLRPVSANDTSSDAFITLSFSANLTSTYARSVLREDICGPSGRDVVYVENGLYDVSTSPAIDLAARSLRYMRRNATGRVLMTTGLVNGGIVSANGNVGVVFNDIEFVSSGFAVQVGGSASVSLHGCVVSGSNDTLTTAVGVRVVGSGSLYVVGCVFKDLYKTTSGGRGAGISFASNGMLTVAQSTFNNMYASFGGAIYVRGGSVYVVGSLFSRCTAFESDGGSIYVEGIKTSLWVVNSTFEDSYADTSSGGALFIFSAALVDIVGCVFVSCGASWSGGAIHNNYEGGIVSVAQSVFDANWSDRYGGAIFSWGYIEVADSRFTSCWATTDGGAILSVNDLQLSDSFFSECNAEYGGAIYADDYFTTVRSNFTGNQALFIGGALFHFASSNSPSIGRSSITACRFVTNIATGTALDSDLSYYAGYGGGVYAGSVSFTQGLDIVASHFEGELKGVPCRILPRSAVTRL* # ORIGINAL: g6440.t1 original gene structure, not modified by PASA NODE_2693_length_5433_cov_62.4972 AUGUSTUS gene 88 822 . + . ID=g6440;Name=g6440.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS mRNA 88 822 . + . ID=g6440.t1;Parent=g6440;Name=g6440.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 88 654 . + . ID=g6440.t1.exon1;Parent=g6440.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 88 654 . + 0 ID=cds.g6440.t1;Parent=g6440.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 784 822 . + . ID=g6440.t1.exon2;Parent=g6440.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 784 822 . + 0 ID=cds.g6440.t1;Parent=g6440.t1 #PROT g6440.t1 g6440 QKWHTLNTQQQRTANHVLLYVSAINSVAVERFIDGPYRKHNNNYGYVNEDERNTPQAFSHFTYEGSGHTSLVCDIQGVGDLYTDPQMHTIDKIGFGKGNLGVKGFDKFLETHRCNSICRYLKLPSINAKAVDMGTIPATLYMPQDPVSNVRLQPVPPLPHYARLAPPSSPAQSSTSPLLPRDAGVRASAAGSSMFACCTLL* # ORIGINAL: g6441.t1 original gene structure, not modified by PASA NODE_2693_length_5433_cov_62.4972 AUGUSTUS gene 1218 4119 . - . ID=g6441;Name=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS mRNA 1218 4119 . - . ID=g6441.t1;Parent=g6441;Name=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 3816 4119 . - . ID=g6441.t1.exon1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 3816 4119 . - 0 ID=cds.g6441.t1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 2986 3170 . - . ID=g6441.t1.exon2;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 2986 3170 . - 2 ID=cds.g6441.t1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 2472 2616 . - . ID=g6441.t1.exon3;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 2472 2616 . - 0 ID=cds.g6441.t1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 1713 1960 . - . ID=g6441.t1.exon4;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 1713 1960 . - 2 ID=cds.g6441.t1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 1509 1594 . - . ID=g6441.t1.exon5;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 1509 1594 . - 0 ID=cds.g6441.t1;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS exon 1218 1281 . - . ID=g6441.t1.exon6;Parent=g6441.t1 NODE_2693_length_5433_cov_62.4972 AUGUSTUS CDS 1218 1281 . - 1 ID=cds.g6441.t1;Parent=g6441.t1 #PROT g6441.t1 g6441 MSLNLHKKRHFDASDGAGSSREPVAPPARAEPLQLLWSSDDDDAAAAQAQARGSTAADELRADLQRRKKMRIEEPADVPQYRAGANADARRTQATRTNVETEDATEGVGDIPSDTLAALQYLRSVFPRHKFGDPSDPNTLPAIMLKHQVYGVVADRTEADRELVRLRNTRKIRIFKLNSPSDEFCIVFVDDFCTYIRAHASRASEDIRNITERFISDVLHTELDTSVKAAALARALGDDGARLLMSSGLLTMRDVATFFFGFPGAAPFLRSLSKGRQMILQALKKTKFKEMLASDLKRRKLGGSKLAFDYHLLDIVGSEAVERIETPAGDLIRLVDRGKGVRR* # ORIGINAL: g2821.t1 original gene structure, not modified by PASA NODE_18865_length_169_cov_54.7553_potentialcontaminant AUGUSTUS gene 2 169 . + . ID=g2821;Name=g2821.t1 NODE_18865_length_169_cov_54.7553_potentialcontaminant AUGUSTUS mRNA 2 169 . + . ID=g2821.t1;Parent=g2821;Name=g2821.t1 NODE_18865_length_169_cov_54.7553_potentialcontaminant AUGUSTUS exon 2 169 . + . ID=g2821.t1.exon1;Parent=g2821.t1 NODE_18865_length_169_cov_54.7553_potentialcontaminant AUGUSTUS CDS 2 169 . + 0 ID=cds.g2821.t1;Parent=g2821.t1 #PROT g2821.t1 g2821 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM # ORIGINAL: g11345.t1 original gene structure, not modified by PASA NODE_2011_length_8104_cov_43.0534 AUGUSTUS gene 228 3041 . - . ID=g11345;Name=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS mRNA 228 3041 . - . ID=g11345.t1;Parent=g11345;Name=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 2985 3041 . - . ID=g11345.t1.exon1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 2985 3041 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 2672 2818 . - . ID=g11345.t1.exon2;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 2672 2818 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 2348 2452 . - . ID=g11345.t1.exon3;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 2348 2452 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 2105 2125 . - . ID=g11345.t1.exon4;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 2105 2125 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 1462 1756 . - . ID=g11345.t1.exon5;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 1462 1756 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 1076 1216 . - . ID=g11345.t1.exon6;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 1076 1216 . - 2 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 510 766 . - . ID=g11345.t1.exon7;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 510 766 . - 2 ID=cds.g11345.t1;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 228 389 . - . ID=g11345.t1.exon8;Parent=g11345.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 228 389 . - 0 ID=cds.g11345.t1;Parent=g11345.t1 #PROT g11345.t1 g11345 MATGDTKLILALINRLGEKLPCNGRPDQETAQDREMLEQTRKFLVKLSDQRLGLVVNAIFTLLESLMKNVACTPEDELDLLARSQCMLVTTVAECFKQNAQSNTAGDPTETHPDPSPLDEPLAKYLVGLVYHLLHTSIGDERTQKEIRKSCADIFFYLSASNFVILFSRLQAKLQGMAVSNEETPDVSELVLVQHWSLNSKRLGDVIDDIANKAKSLKKHVLYAAASTLRKCIWNWIENHPSEFTALCASSKRLSAGCEKLFTIFDGMADSSKKKTAYWPVQMLLLVLCPDILLSVATHENLSKESEAKVLITATLAQAYIMHLLVLLFAFVNRMYVPLCLDRFVDTLRKSLNAAKMSDVAAIAFVDICKASTYVSKDAKSALRYLVPSVETELK # ORIGINAL: g11346.t1 original gene structure, not modified by PASA NODE_2011_length_8104_cov_43.0534 AUGUSTUS gene 4363 7452 . + . ID=g11346;Name=g11346.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS mRNA 4363 7452 . + . ID=g11346.t1;Parent=g11346;Name=g11346.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS exon 4363 7452 . + . ID=g11346.t1.exon1;Parent=g11346.t1 NODE_2011_length_8104_cov_43.0534 AUGUSTUS CDS 4363 7452 . + 0 ID=cds.g11346.t1;Parent=g11346.t1 #PROT g11346.t1 g11346 MSVMPLFLRRMLIKTPRRTKLVLLLGFTVAVLLILGSAPLSPSLINTASEFSSQPALRDDASERRSMTLEDNLVMGVATGASASELRVFLKSINLHAPTAKVVLLVDMDAPMSFPPPAEGLKYTIQTVMTQTLQFPWNSYQPSSWRYLQYRKTMDTATTSYRKVLLTDVRDVAFQADPFQIVKDTQTLHVFNEWIRSTIGNPSNGQEDHSNRDAIDQCFGRQAVEALQSRSVCNSGFVIGSFDVVSKYVNKMLSQLESLQKCERRATDQAILNYLLHTGQLDAAVGKVAAHDNEKGPVAALKYVPGQVIQINPEGIILNTIGEPYVAVHQWGVHEAVATALLRAYPEPKLYGEVSDEQNPDDEGIFDGDEEKSPFELAIAPIAKVDWSSRRRVVLGYAKGRSFDQIALFVVSLRSAIAQTMRYVRQPPQTTDIVIFAERDLISTLEWIAIKYNVQVEPTDNSEGRVFPKTALFRMYLNQPMSAAYTDIFATDVGETYFQADPFFTASEPVDVHIFNENESVTIGQAKLSTDSQGTLAESVVRCYSDNELAEMKQHVVSSPGVVLGGLEGMKYYLGLMSTSVLQMESCTGSRLDDAVHNFLIVSGLIVRSGARLYVHENEDGYVCNYEYAEAGHAIRDEVEGSQIINRDNEMCGVVHEFIANPKVASMFEKKHTEPLREARAGRDAYIRKKHMQGAHKPNDGGRRPMSVVDDETEPTENAARDVSAMRMARGKQRALSSLKLSRRGNVGVNGARSRRVALGMATGLDPTDIIVFTNSLAQQASDADIVLFVDVLPQSGVLFPPTVQFVPVDMSTMPEPWSGFHPSNSRYQLYSDWLDTANARGVSYDAVLISDVRDVLFQADPFAVVTKDAVYVFEEDARVTIGNGGGMQNFINRDWIAKCYGKDEAVLHDRKKVVCSGVTVGSGAGMRRYLDAMTTELVARHTCEANGVDQGIHNQLIHSGRLAAAVVVIPMSNERGPVLTMAFLRPNEVPSGTVADEPITNEDGQLYAILHQYDRHKDIAKSIRRRFA* # PASA_UPDATE: g9054.t1, single gene model update, valid-1, status:[pasa:asmbl_481,status:3], valid-1 NODE_1126_length_13766_cov_39.8507 . gene 968 4507 . - . ID=g9054;Name=g9054.t1 NODE_1126_length_13766_cov_39.8507 . mRNA 968 4507 . - . ID=g9054.t1;Parent=g9054;Name=g9054.t1 NODE_1126_length_13766_cov_39.8507 . five_prime_UTR 4333 4507 . - . ID=g9054.t1.utr5p1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 4108 4507 . - . ID=g9054.t1.exon1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 4108 4332 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 3740 3931 . - . ID=g9054.t1.exon2;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 3740 3931 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 3419 3561 . - . ID=g9054.t1.exon3;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 3419 3561 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 3084 3231 . - . ID=g9054.t1.exon4;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 3084 3231 . - 1 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 2743 2829 . - . ID=g9054.t1.exon5;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 2743 2829 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 2370 2636 . - . ID=g9054.t1.exon6;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 2370 2636 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 2011 2199 . - . ID=g9054.t1.exon7;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 2011 2199 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . exon 968 1741 . - . ID=g9054.t1.exon8;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . CDS 1022 1741 . - 0 ID=cds.g9054.t1;Parent=g9054.t1 NODE_1126_length_13766_cov_39.8507 . three_prime_UTR 968 1021 . - . ID=g9054.t1.utr3p1;Parent=g9054.t1 #PROT g9054.t1 g9054 MESRSRTSSNTEPRVRTYSASLESRPRTSSASETHVPITVSSVSGEAVPLTSLWKDRVAVVCFLRHLGCRFCRQQVTAMMTIKDRLDKAGVPLVCVSLGQPEDATKFVAETKFRGELFVDTDAQAPKSYRAMRLANGMKVFEHESVKGLAQAALDEGFQDGTYTGDITQIGGVFVLGPGNSCDFAYRSQYAGDHPNPEDVLAAATGAVSEDTTYVFPSTEAWVKRIRADVRVEKRESEVDAQEIVRAMGGPQPFTVVEEVPRPALVIPAPVDNFLTPTANRTALSVVVGGIVYQVARRSPALASLLGIGAGREGLVVAVSLAALAFIVLTLAERWLAVPLAARVVAVRGEESPQDESCRRRASSSATAPAPAPAPTSEAILRTPRDVDELVLSGLGIKCDCGNVEIPVEGFRTIDPEEDSTPALARSDGPTAADITNVSTAPITPEDLEVLQVNNCYVREFLAKPHPLLGRKGSTCPFVPVALKQNSIYMTVYRTGPDATADDICALARGFVSRFLQLEPTDGKRRMNKAVMLIFPDVRLRDAVEIIDKTQAKLKPDFVAQGLMIGEFHLNNNTPGLHNPEFYPLRTPYPSLAIRHMAPSDLVFLSPEQYSAATRVRFLESYIEQFGVGDEASKNDRQLVAAREALEKAKTELGLP* # PASA_UPDATE: g9055.t1, single gene model update, valid-1, status:[pasa:asmbl_482,status:12],[pasa:asmbl_483,status:12], valid-1 NODE_1126_length_13766_cov_39.8507 . gene 5199 9687 . - . ID=g9055;Name=g9055.t1 NODE_1126_length_13766_cov_39.8507 . mRNA 5199 9687 . - . ID=g9055.t1;Parent=g9055;Name=g9055.t1 NODE_1126_length_13766_cov_39.8507 . five_prime_UTR 9607 9687 . - . ID=g9055.t1.utr5p1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . five_prime_UTR 9393 9393 . - . ID=g9055.t1.utr5p2;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 9607 9687 . - . ID=g9055.t1.exon1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 9345 9393 . - . ID=g9055.t1.exon2;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 9345 9392 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 8932 9208 . - . ID=g9055.t1.exon3;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 8932 9208 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 8668 8774 . - . ID=g9055.t1.exon4;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 8668 8774 . - 2 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 8387 8461 . - . ID=g9055.t1.exon5;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 8387 8461 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 8078 8173 . - . ID=g9055.t1.exon6;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 8078 8173 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 7494 7646 . - . ID=g9055.t1.exon7;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 7494 7646 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 7137 7247 . - . ID=g9055.t1.exon8;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 7137 7247 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 6820 6918 . - . ID=g9055.t1.exon9;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 6820 6918 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 6620 6712 . - . ID=g9055.t1.exon10;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 6620 6712 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 6328 6477 . - . ID=g9055.t1.exon11;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 6328 6477 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 5928 6131 . - . ID=g9055.t1.exon12;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 5928 6131 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 5690 5795 . - . ID=g9055.t1.exon13;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 5690 5795 . - 0 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 5397 5549 . - . ID=g9055.t1.exon14;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 5397 5549 . - 2 ID=cds.g9055.t1;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . exon 5199 5308 . - . ID=g9055.t1.exon15;Parent=g9055.t1 NODE_1126_length_13766_cov_39.8507 . CDS 5199 5308 . - 2 ID=cds.g9055.t1;Parent=g9055.t1 #PROT g9055.t1 g9055 MYAARNAVTRSLRLATATAVRSRGYANDIRYGDDARVRILAGVNKIADAVEVTLGPRGRNAFIDRNYMSPRATKDGVSVAKSIEFRNKYENIGAMMVRGVADKANDAAGDGTTTATVLMRAIYAACVKNTTAGISPTELRKGIQAAIEVVLKSLKGDTIMINSAKEIEQVATISANGDVEIGRVIAQAMERVGKDGVITVQDGHSLKDELEVTEGLKFDRGYLSPLFVTNKRTLKTEFENALVLLVDGKISSVQSIIPVLEIAAESKRPLIMIAEDVDADPLSMLILNKTRNVCNVVAVRAPGFGDTRKAMLQDMAILTGSQVVSEELGLKLEDIEMTHLGKCKNVTVTKDDTILLGGGGDHKQIVERIEMLHEIARAADSSYDKDKASERLAKLSGGVAIIKVGGSSDVEVGERKDRITDALNATKAAVEEGIVPGGGVALLNASRALLSFKAANFDQSLGVGVVRDAIKAPITAIARNAGFEGAVVCDMVLRQESRTHGFNAATGEYVDMIKAGIIDPTKVVRTALVDASGVASLLATTEACIVEIPEKAPAMPQGGMGGMGGMGGMGGMGGMGGMMGGMGGMGGMGGFGM* # ORIGINAL: g9056.t1 original gene structure, not modified by PASA NODE_1126_length_13766_cov_39.8507 AUGUSTUS gene 10332 13620 . + . ID=g9056;Name=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS mRNA 10332 13620 . + . ID=g9056.t1;Parent=g9056;Name=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 10332 10353 . + . ID=g9056.t1.exon1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 10332 10353 . + 0 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 10688 10845 . + . ID=g9056.t1.exon2;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 10688 10845 . + 2 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 11031 11813 . + . ID=g9056.t1.exon3;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 11031 11813 . + 0 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 12050 12139 . + . ID=g9056.t1.exon4;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 12050 12139 . + 0 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 12373 12567 . + . ID=g9056.t1.exon5;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 12373 12567 . + 0 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 12781 13150 . + . ID=g9056.t1.exon6;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 12781 13150 . + 0 ID=cds.g9056.t1;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS exon 13439 13620 . + . ID=g9056.t1.exon7;Parent=g9056.t1 NODE_1126_length_13766_cov_39.8507 AUGUSTUS CDS 13439 13620 . + 2 ID=cds.g9056.t1;Parent=g9056.t1 #PROT g9056.t1 g9056 MVGLTSAAGIVALLDEPDDQLKVFALERLNGMVDTFWAEVSESVGRIEELYENEKFAQRQLAALVASKVYYHLGEFDDSLAFALGAGDLFDVSRRSEYVDTMVAKCIDRYIRLRTSPSSAQSASQSDGDVVMADGDGASAGGSSKDIDPRLTGIVDRMFERCLHTGSHLQAIGIALETHRIDVLERAISASDDVSGMLSYCFGLVMSLVQHRVFRNSVLRVLVRLYLNLATPDYVNVCQCLIHLDDATAVAEILRSLVKEDGDQAIMALQIAFDLYESASQKFLRDVRGLLPGGPDDKAEGASADGDGKKGFAEWMGKLHKVLSGDATIALHLEFLYSKNHTDLNILKNTKTLQQRGSVVHSAIVIANGLMHAGTTVDTFLRDNLEWLGRAINWAKFSATASLGVIHKASRPTLSIGHVKDGMNVLAPYLPSGSGSPGSPYAEGGGLYALGLIHANHGDEVSKYLLTQLRNASTEIVQHGACLGLGVAAMASGSEEIYDELKSTLYSDSAVAGEACGLAMGLLMVGTEHPTAVEDMIAYAHETQHEKIIRGLALGIALINYGREQLADASIDALCADKDPILRAAGMYSVAMAYAGTVR* # PASA_UPDATE: g9053.t1, single gene model update, valid-1, status:[pasa:asmbl_484,status:12], valid-1 NODE_1126_length_13766_cov_39.8507 . gene 122 819 . + . ID=g9053;Name=g9053.t1 NODE_1126_length_13766_cov_39.8507 . mRNA 122 819 . + . ID=g9053.t1;Parent=g9053;Name=g9053.t1 NODE_1126_length_13766_cov_39.8507 . five_prime_UTR 122 122 . + . ID=g9053.t1.utr5p1;Parent=g9053.t1 NODE_1126_length_13766_cov_39.8507 . exon 122 281 . + . ID=g9053.t1.exon1;Parent=g9053.t1 NODE_1126_length_13766_cov_39.8507 . CDS 123 281 . + 0 ID=cds.g9053.t1;Parent=g9053.t1;5_prime_partial=true NODE_1126_length_13766_cov_39.8507 . exon 590 819 . + . ID=g9053.t1.exon2;Parent=g9053.t1 NODE_1126_length_13766_cov_39.8507 . CDS 590 631 . + 0 ID=cds.g9053.t1;Parent=g9053.t1 NODE_1126_length_13766_cov_39.8507 . three_prime_UTR 632 819 . + . ID=g9053.t1.utr3p1;Parent=g9053.t1 #PROT g9053.t1 g9053 LDENDEILSVWAPDAKHPVSDGTAVLHLSIALGSIGLFLYMIYLSDPESRRPTAVRTLPPPKPEHH* # PASA_UPDATE: g9639.t1, single gene model update, valid-1, status:[pasa:asmbl_6290,status:12], valid-1 NODE_3600_length_3133_cov_39.7387 . gene 138 2539 . - . ID=g9639;Name=g9639.t1 NODE_3600_length_3133_cov_39.7387 . mRNA 138 2539 . - . ID=g9639.t1;Parent=g9639;Name=g9639.t1 NODE_3600_length_3133_cov_39.7387 . five_prime_UTR 2352 2539 . - . ID=g9639.t1.utr5p1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 2283 2539 . - . ID=g9639.t1.exon1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 2283 2351 . - 0 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 2090 2179 . - . ID=g9639.t1.exon2;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 2090 2179 . - 0 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 1695 1814 . - . ID=g9639.t1.exon3;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 1695 1814 . - 0 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 1283 1429 . - . ID=g9639.t1.exon4;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 1283 1429 . - 0 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 701 815 . - . ID=g9639.t1.exon5;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 701 815 . - 0 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 473 513 . - . ID=g9639.t1.exon6;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 473 513 . - 2 ID=cds.g9639.t1;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . exon 138 263 . - . ID=g9639.t1.exon7;Parent=g9639.t1 NODE_3600_length_3133_cov_39.7387 . CDS 138 263 . - 0 ID=cds.g9639.t1;Parent=g9639.t1;3_prime_partial=true #PROT g9639.t1 g9639 MMSIRFRACMLLGAVGDAMGYKNGSWEFTKDGRNIHADAEQLGGVLNLHINKKEYRVSDDTVMSLASAEALLMPSNSDEELYENFVERYIECMGDMTGRAPGNTTIRSIRIVANAPTGQKWRARDFDISSGGCGAAMRALPIGLRFWRPNDMRALVACAIESGRITHHSPTGYLGSVAGAAFVAYAIQGVPINKWGQLLLDEVIPLAREHIEQAGRFVLENLDNFSYFVRAWDEYL # PASA_UPDATE: g257.t1, single gene model update, valid-1, status:[pasa:asmbl_3162,status:3], valid-1 NODE_1984_length_8199_cov_39.0329 . gene 80 7755 . + . ID=g257;Name=g257.t1 NODE_1984_length_8199_cov_39.0329 . mRNA 80 7755 . + . ID=g257.t1;Parent=g257;Name=g257.t1 NODE_1984_length_8199_cov_39.0329 . five_prime_UTR 80 127 . + . ID=g257.t1.utr5p1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 80 185 . + . ID=g257.t1.exon1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 128 185 . + 0 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 335 411 . + . ID=g257.t1.exon2;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 335 411 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 608 638 . + . ID=g257.t1.exon3;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 608 638 . + 0 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 869 949 . + . ID=g257.t1.exon4;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 869 949 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 1308 1402 . + . ID=g257.t1.exon5;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 1308 1402 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 1590 1692 . + . ID=g257.t1.exon6;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 1590 1692 . + 0 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 2125 2182 . + . ID=g257.t1.exon7;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 2125 2182 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 2547 3493 . + . ID=g257.t1.exon8;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 2547 3493 . + 1 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 3724 3781 . + . ID=g257.t1.exon9;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 3724 3781 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 3992 4206 . + . ID=g257.t1.exon10;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 3992 4206 . + 1 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 4347 4404 . + . ID=g257.t1.exon11;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 4347 4404 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 4735 7148 . + . ID=g257.t1.exon12;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 4735 7148 . + 1 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . exon 7337 7755 . + . ID=g257.t1.exon13;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . CDS 7337 7404 . + 2 ID=cds.g257.t1;Parent=g257.t1 NODE_1984_length_8199_cov_39.0329 . three_prime_UTR 7405 7755 . + . ID=g257.t1.utr3p1;Parent=g257.t1 #PROT g257.t1 g257 MQWLKVLLFQISSASGSTDALSQDKAGHIFQSALTGTCDLCSKTLIQYGTGGKCDICSFQMCKKCITGGNIPGCVHFHSHGGGGASDVMGHCFRVILSSTMNGTDECGFCRGLLWTSSSALKCTECQYMSHKKCFTLVNTSCTRAAKEDLPPGWEVIYNEEGLPVYVNHILRITSWTSPLDQRAGGRRAYVQINAAAGPGSPASRNTAVPANPSEDMLRVFDDIAARNAGNTAYYLVDESGLPMYEAYDPYAPPPFDDFDLPPAYAEDGAPIEGNVTLASSASTASVASSASSTAQLYLDFEEEWECDACGGLNVVSSMPPKCTCGHPAPPPAKPAPVVSAAAPVPAASVPAKKASVRQRQPPPQPYLEMQEDWICGQCGGLNAVGGMNPKCGTCEQPAPLPVRPSAAPTSSQGASSATVSSPVPSAASRGRGQAVVPREYLVMGEEWECDYCTVINIVSSMRPYCSVCEAAASLPVRTEESSELPPGWQCMDDNQGHKLYINYATHETSWERPKLSDVTGHVRTKSVHGAPAPAAASSSAPLSESMSSNLTRTASRIQHSSVGSAKRLLGGSEALPPGWESMIDGLGRKFYVNHNLRTTSWFPPRQLRETERRSQPWIPPTDIPESLKIRRGSVKESSASSSSTPVASSAGAASSPGQVDLEDEWECTECGELNAMSAALPKCSCGAVYMRVGDATAASLAASQSSASSTLSAPGAAGSGPRPVSPRPPPRPTASTIKRARSPLPVGAAAITSAYTPTPAPAQPSQPAVRVDEAKTSATLAASSTSAAMGSSTESSGERRASISMFSDEDMMAIFSVMGESTTNSASAASTTKAAEPTPAVTPVTPAYQKPPAPVRTATSPAKTAPVTVNATATATAAAVTTPTSATHSPASSRIVTSVPSKAAVVGTSAGVASSAPLSSPARSSAPAVTVATAKTVTPPAVISAPVAAGMTTPTPAHVPAPAAVSVASTGAFSAPAPTSAGLSVAVAAGTHSANASTPGATPLSPRPILKTDASPRTGRRRRVGFASSTVDITTSMDDAIEDAFYEDAAAAEAAEAEQEAKGAAGIFNKLRDIDRAIKATSAANASARPATATAPAVTSASAAVTAPAVTAAPVAVTAAAAPSSTTATAAASVTPVTAPVAARGTAAPAPSASRATPDTKPATPVASSTAAPARAAIAVNTTTAATAATVTSVPAYTPPPSNHVPASTKSVATPTAVPPHTSSVGVATAQSSTSIARSAASPRPSPALPTPAPSVATTHVAQATAPASTTTATSTTTAAPKSTVVTSTPSIAARPKYTPTPSPSVTTATTATPKLTSVAAVASVFMGASEPANKPVVVRRTSSGASDAPPLRQSVSDLAKQWAANSASSSSGPKPAVAPRPPMERRTSTEAANPAGGAADATGRPSVTPRPQKIGINR* # ORIGINAL: g3111.t1 original gene structure, not modified by PASA NODE_4516_length_1515_cov_34.5771_potentialcontaminant AUGUSTUS gene 2 479 . + . ID=g3111;Name=g3111.t1 NODE_4516_length_1515_cov_34.5771_potentialcontaminant AUGUSTUS mRNA 2 479 . + . ID=g3111.t1;Parent=g3111;Name=g3111.t1 NODE_4516_length_1515_cov_34.5771_potentialcontaminant AUGUSTUS exon 2 479 . + . ID=g3111.t1.exon1;Parent=g3111.t1 NODE_4516_length_1515_cov_34.5771_potentialcontaminant AUGUSTUS CDS 2 479 . + 1 ID=cds.g3111.t1;Parent=g3111.t1 #PROT g3111.t1 g3111 ASSAKSSVGIVIIVDTCGRRVSDPRTGLFGVIFPAHWRIIKYWPNLETYGDRCLNNDHLKAYLAWSLRNVLLRKSILTCEETYLLNPVDDSIKKCYDAHCNKAHALFGKKIPEYVGKNVAPVELLKEIGPLAKIHQKFVDSKRQLNAEIAALVSTIVN* # PASA_UPDATE: g6206.t1, single gene model update, valid-1, status:[pasa:asmbl_6262,status:12], valid-1 NODE_3595_length_3138_cov_33.0457 . gene 159 2943 . + . ID=g6206;Name=g6206.t1 NODE_3595_length_3138_cov_33.0457 . mRNA 159 2943 . + . ID=g6206.t1;Parent=g6206;Name=g6206.t1 NODE_3595_length_3138_cov_33.0457 . five_prime_UTR 159 160 . + . ID=g6206.t1.utr5p1;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . exon 159 910 . + . ID=g6206.t1.exon1;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . CDS 161 910 . + 0 ID=cds.g6206.t1;Parent=g6206.t1;5_prime_partial=true NODE_3595_length_3138_cov_33.0457 . exon 1101 1745 . + . ID=g6206.t1.exon2;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . CDS 1101 1745 . + 0 ID=cds.g6206.t1;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . exon 1957 2134 . + . ID=g6206.t1.exon3;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . CDS 1957 2134 . + 0 ID=cds.g6206.t1;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . exon 2502 2605 . + . ID=g6206.t1.exon4;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . CDS 2502 2605 . + 2 ID=cds.g6206.t1;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . exon 2859 2943 . + . ID=g6206.t1.exon5;Parent=g6206.t1 NODE_3595_length_3138_cov_33.0457 . CDS 2859 2943 . + 0 ID=cds.g6206.t1;Parent=g6206.t1;3_prime_partial=true #PROT g6206.t1 g6206 QDQDTVGGGFDTSQALVAFVDEFRIWSVVRTQDEIKQGMFKELDGTETNLWAYYKFDEGTGDIAYNKVNASRYPFKLASGAAFPATPSQKPLWATSRAPVWGSSALTALINRGKITRVELSPTSAANITLGSISGSSCAGKVDFFSDEAGTSALADSASLGANAPYAFVRIASGAPTPFVSCFVPYDVTNVYGTAAQRITFSENPVPTVESMTLSFAEDANIVFPLTGKDNEIISTVIVTSLPKKGTLYALTTGLVRDYPLLANGSNQLASGGPMQYVPLPNNYGSPYDTFKYRVMDASGGLSAEATVVINITPADDLPVAGNNPYYLDFIRTGVVFSMPTLDPSNGGATFSVAFFAKFPALPSSQQNNYTVFYMPAAATPPSYPYSLRLSSNGRLVCAVAGSDSVSVDITSLVGDAWFHVSVGFSGTTVIMHLNGAWAANGTAPSRPTVTPGIVLGGFVGSVDEFSVYNRILTVSDLAVVRTVKQSSLSGALVAAFSFDEGINLESKCYGTSGACAFKGLLGDGEALKAPMWMLTPPRAAASFSTFPQFETIITDEDVARVVSLRAIDVDTDARALSLVIMNAPSA # PASA_UPDATE: g12474.t1, single gene model update, valid-1, status:[pasa:asmbl_7166,status:12], valid-1 NODE_4270_length_1903_cov_37.5164 . gene 2 306 . + . ID=g12474;Name=g12474.t1 NODE_4270_length_1903_cov_37.5164 . mRNA 2 306 . + . ID=g12474.t1;Parent=g12474;Name=g12474.t1 NODE_4270_length_1903_cov_37.5164 . five_prime_UTR 2 2 . + . ID=g12474.t1.utr5p1;Parent=g12474.t1 NODE_4270_length_1903_cov_37.5164 . exon 2 306 . + . ID=g12474.t1.exon1;Parent=g12474.t1 NODE_4270_length_1903_cov_37.5164 . CDS 3 306 . + 0 ID=cds.g12474.t1;Parent=g12474.t1;5_prime_partial=true;3_prime_partial=true #PROT g12474.t1 g12474 SPPSFCAPGVSIGRRSLRCSTRHPRTSVGCAFGGSDFVDGRRKAPHCHGKDSVPTGRSKAQMTFSGLQKMSLFIATLLLTQHMYLGLPLFVQCRIQHVHIC # PASA_UPDATE: g12475.t1, single gene model update, valid-1, status:[pasa:asmbl_7167,status:12], valid-1 NODE_4270_length_1903_cov_37.5164 . gene 412 1721 . - . ID=g12475;Name=g12475.t1 NODE_4270_length_1903_cov_37.5164 . mRNA 412 1721 . - . ID=g12475.t1;Parent=g12475;Name=g12475.t1 NODE_4270_length_1903_cov_37.5164 . exon 412 1721 . - . ID=g12475.t1.exon1;Parent=g12475.t1 NODE_4270_length_1903_cov_37.5164 . CDS 732 1721 . - 0 ID=cds.g12475.t1;Parent=g12475.t1 NODE_4270_length_1903_cov_37.5164 . three_prime_UTR 412 731 . - . ID=g12475.t1.utr3p1;Parent=g12475.t1 #PROT g12475.t1 g12475 MNENVGDDSELTGGAGEGLSVSFELSPKDKHGRCLPPLSSIHSALSQQRKALLKSLIYIPILLAYGIALSIMVDDLHNTTSSAGPDIIWSGRREFTMRQILFYLREAAVANTTESLDAAVFGLNSAMAETKMIDTGVVYGNTTMGTAGTGRLAALRELLQGDACIKTNVLGFEHANSDSPEDCDTFANGLLLRGVETALASYMEKSDRLARKFAAVPRPTSTAQITAMLDDPDLAHVDKLILRYIHPAAEASTGLLIINANNAVNTYQKNSEILLIVVNVFMGISFIFVFYPLSRALEASIRNSRMLLMLFPFEHVINRGLINAYLEDI* # PASA_UPDATE: g11775.t1, single gene model update, valid-1, status:[pasa:asmbl_175,status:3], valid-1 NODE_1046_length_14433_cov_42.3747 . gene 7328 9782 . + . ID=g11775;Name=g11775.t1 NODE_1046_length_14433_cov_42.3747 . mRNA 7328 9782 . + . ID=g11775.t1;Parent=g11775;Name=g11775.t1 NODE_1046_length_14433_cov_42.3747 . five_prime_UTR 7328 7391 . + . ID=g11775.t1.utr5p1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . exon 7328 8062 . + . ID=g11775.t1.exon1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . CDS 7392 8062 . + 0 ID=cds.g11775.t1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . exon 8283 8824 . + . ID=g11775.t1.exon2;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . CDS 8283 8824 . + 1 ID=cds.g11775.t1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . exon 9131 9239 . + . ID=g11775.t1.exon3;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . CDS 9131 9239 . + 2 ID=cds.g11775.t1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . exon 9478 9782 . + . ID=g11775.t1.exon4;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . CDS 9478 9583 . + 1 ID=cds.g11775.t1;Parent=g11775.t1 NODE_1046_length_14433_cov_42.3747 . three_prime_UTR 9584 9782 . + . ID=g11775.t1.utr3p1;Parent=g11775.t1 #PROT g11775.t1 g11775 MSLTSRSATKVSAPLKTAGEPDARYWTIHGEQYDLTSYVKRHPGGAHMLLLGQGRDCTELVESMHALTPENWRSILHKYKVDPTKMNSEAIAAETASKKSSRQPKTSSAVREHVTFAWDATDTFYADVKRQVRAYFQNKGQSHHAPWTFWMWAWPLMIATFAVDYFWITTAWMPLSALTGALYACMGFYLMHTASHFGLSHSVWVNEIAAEAWCNSFAVWRVMWSQHHHEHHAHTGVTGKDPDLTNYYPLVRKHSKTPWRPAYRFQKYVYLPMALALPNLFVGQAISYVRGAYKGKIFGMKLTNRTLVRPIDRISVVFFTLLSLVLHVGIPAYLHGLWSTLFQVFVFATALGIMFWAITFPNHDTAATQDHVIPTDALGRRDWGAQQVLSSSNFGASTLVSSTLGGMNYQIEHHLFPTCHPAHYPAVSQIVQKCCRERGIGYVCHDSWFTALGSYMTWIHALANPNYGSTKAPAS* # PASA_UPDATE: g11772.t1, single gene model update, valid-1, status:[pasa:asmbl_177,status:12], valid-1 NODE_1046_length_14433_cov_42.3747 . gene 227 503 . + . ID=g11772;Name=g11772.t1 NODE_1046_length_14433_cov_42.3747 . mRNA 227 503 . + . ID=g11772.t1;Parent=g11772;Name=g11772.t1 NODE_1046_length_14433_cov_42.3747 . five_prime_UTR 227 227 . + . ID=g11772.t1.utr5p1;Parent=g11772.t1 NODE_1046_length_14433_cov_42.3747 . exon 227 503 . + . ID=g11772.t1.exon1;Parent=g11772.t1 NODE_1046_length_14433_cov_42.3747 . CDS 228 473 . + 0 ID=cds.g11772.t1;Parent=g11772.t1;5_prime_partial=true NODE_1046_length_14433_cov_42.3747 . three_prime_UTR 474 503 . + . ID=g11772.t1.utr3p1;Parent=g11772.t1 #PROT g11772.t1 g11772 TSHYVATLGHKANDDITFNSRYAPYTHPRYGTIKSVRTIRPVRAGEEITVSYDYSHVDENGVEDLPDWYAKRRQMFAGNAI* # ORIGINAL: g11774.t1 original gene structure, not modified by PASA NODE_1046_length_14433_cov_42.3747 AUGUSTUS gene 4125 6199 . - . ID=g11774;Name=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS mRNA 4125 6199 . - . ID=g11774.t1;Parent=g11774;Name=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 5888 6199 . - . ID=g11774.t1.exon1;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 5888 6199 . - 0 ID=cds.g11774.t1;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 5236 5779 . - . ID=g11774.t1.exon2;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 5236 5779 . - 0 ID=cds.g11774.t1;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 4559 4661 . - . ID=g11774.t1.exon3;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 4559 4661 . - 2 ID=cds.g11774.t1;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 4125 4377 . - . ID=g11774.t1.exon4;Parent=g11774.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 4125 4377 . - 1 ID=cds.g11774.t1;Parent=g11774.t1 #PROT g11774.t1 g11774 MGTLRCITSGGIDSMSVLRQRVLPALSHARRLHSAGGVSSLEEIGITISGSASVSIAPLVGRCLLCLHGEEASKFIQGLSTNDMRLFDREPTRGALYSFFLNHKGRVLYDTIIHRDTSRPNSYFIECDKSAASDFERHLRKYVLRTRVTIEKAAGVVEPYAILPFPSVIPAWDEHTLSLVKNVDKEDDFMLRRPDPDARGHFIRLDVTEGDGTVCRAQAVFDPRYKGLGLRMLLAPGQSELNRFASVSTDDYLRLRCSLGVGEGVTEIPSGDALPLEHNLDELGGVSFTKGCYLGQELTARTHATGVIRKRILSIAFDDSTTDVSSIPPGTDVTVNGRAVGKLRRATGSHGIAMLRLSNVFGADGPKSLSVALAGGVVATGRACVPPFLPPSVIEQAHEDDSE* # PASA_UPDATE: g11777.t1, single gene model update, valid-1, status:[pasa:asmbl_176,status:12], valid-1 NODE_1046_length_14433_cov_42.3747 . gene 12989 14324 . + . ID=g11777;Name=g11777.t1 NODE_1046_length_14433_cov_42.3747 . mRNA 12989 14324 . + . ID=g11777.t1;Parent=g11777;Name=g11777.t1 NODE_1046_length_14433_cov_42.3747 . five_prime_UTR 12989 13086 . + . ID=g11777.t1.utr5p1;Parent=g11777.t1 NODE_1046_length_14433_cov_42.3747 . exon 12989 13222 . + . ID=g11777.t1.exon1;Parent=g11777.t1 NODE_1046_length_14433_cov_42.3747 . CDS 13087 13222 . + 0 ID=cds.g11777.t1;Parent=g11777.t1 NODE_1046_length_14433_cov_42.3747 . exon 13657 14324 . + . ID=g11777.t1.exon2;Parent=g11777.t1 NODE_1046_length_14433_cov_42.3747 . CDS 13657 14324 . + 2 ID=cds.g11777.t1;Parent=g11777.t1 #PROT g11777.t1 g11777 MAPPPKKPVDQRLTLTVQTINQMKQAKLAWDEVIKTGQKYHQQLEMVSDASRAFSRAIRLCADQASQVSSADVAKGLMAVVDVHNQLEDNRTLERQCLMENFLIPVKRRVDAERPVLVNWEKEYKKHFERLNSDVKRAEEHSKTVGKKNPSALQAAIENLTISIKEIEVSRQDKLKESLLMDRKKHCFLLTQYLEYVRSELKVFGDALSGLNSGISEWTHLAGSQDQLPDAELINKKQRTFIEIQPGGGGGFEDKVCANVRVVCCVF* # ORIGINAL: g11773.t1 original gene structure, not modified by PASA NODE_1046_length_14433_cov_42.3747 AUGUSTUS gene 972 1808 . + . ID=g11773;Name=g11773.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS mRNA 972 1808 . + . ID=g11773.t1;Parent=g11773;Name=g11773.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 972 1808 . + . ID=g11773.t1.exon1;Parent=g11773.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 972 1808 . + 0 ID=cds.g11773.t1;Parent=g11773.t1 #PROT g11773.t1 g11773 MRHERRTEYRYHRYEMDSECAQPHAFDGPSVAVPGTLFDRIELDVVELLVVTPDQLWVAARKGRAPNGSFAFSFIARMCFAAAIDSAILSKSWSSTQPSTGQKLFRSAYLQSRGCSSWTVSVVRVLVWLRDEISKAYIDVELSVDVDAEERQRDSLSVTDGMSIGALVSGITCVADFSGVTVMLMSPFDGIGDTELRREPNTLLKTLRREKDDPSARCRAGIALCVTNSGIFLPTGPHCQQRIVQLEMYFARLLFFFVSARKMGKASTESVLRQRGAL* # ORIGINAL: g11776.t1 original gene structure, not modified by PASA NODE_1046_length_14433_cov_42.3747 AUGUSTUS gene 10562 12010 . - . ID=g11776;Name=g11776.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS mRNA 10562 12010 . - . ID=g11776.t1;Parent=g11776;Name=g11776.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS exon 10562 12010 . - . ID=g11776.t1.exon1;Parent=g11776.t1 NODE_1046_length_14433_cov_42.3747 AUGUSTUS CDS 10562 12010 . - 0 ID=cds.g11776.t1;Parent=g11776.t1 #PROT g11776.t1 g11776 MSTLGTDSGSVNESPETPEVRHMDKRLESGLLALEGGGLATLALVSVDFSQETWQRLIDAIRANSTLTDLSLRENKLDAGRAEDLSAVLMEHNKLKKLELEYNYLREGGAVHIAKIISSHPSISIVNIENNNVTATGCASIADALSTATVIEELNIDSNDAGSAGGVALAKALESNKSLKKLSCSSNALGVVGGTAIANALLVNSTLQILQLDWNDIGHDGGVSFANLFASGCHLTELKLHANDMGDDAVTQLAAALQKNATLRLLHLGKNLITHVGAKALCDALKSNKVVDVLDLQSNDLGDQGGAAMGLLLTTNKTLTSLNLLEAGLGPDGCRHIAKAIATNKTLHHLNLNENGMGDDAGTEMATALRGNTGLKEVFVRDNGFRSAVVAAFAESLRLHRGIVVFENNAPTDPGWDKIIKGSLLRNQGGAATSKTGGSATHFYQSGSHNAWATTPIGVRNSQTSTKPKARKQEKSSLCVIL* # ORIGINAL: g14281.t1 original gene structure, not modified by PASA NODE_1374_length_11710_cov_40.1206 AUGUSTUS gene 951 2158 . + . ID=g14281;Name=g14281.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS mRNA 951 2158 . + . ID=g14281.t1;Parent=g14281;Name=g14281.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS exon 951 1625 . + . ID=g14281.t1.exon1;Parent=g14281.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS CDS 951 1625 . + 0 ID=cds.g14281.t1;Parent=g14281.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS exon 2015 2158 . + . ID=g14281.t1.exon2;Parent=g14281.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS CDS 2015 2158 . + 0 ID=cds.g14281.t1;Parent=g14281.t1 #PROT g14281.t1 g14281 MASVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNGVLHSHLRHMRLYHLWPTYNRMYIEDAEFRNEVKATIPVGRLVLVGVDENLRDLSPFEGVHSALFPTTGGSPIAATDLSPLKGAHTVELEIGWLFPADGLAPLATVPVVRIWCQNGSGLPAFVKAELVNLSYAPIDLNYLVGVPRVELCGCKTVEDAPITDLSALRQARYVELNDMQALQDLSCLESARENLTDVSALGRVHTLIVRDCKGVVDVSALGNCHTLDLENCGVLDVSML* # ORIGINAL: g14282.t1 original gene structure, not modified by PASA NODE_1374_length_11710_cov_40.1206 AUGUSTUS gene 6099 6308 . - . ID=g14282;Name=g14282.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS mRNA 6099 6308 . - . ID=g14282.t1;Parent=g14282;Name=g14282.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS exon 6099 6308 . - . ID=g14282.t1.exon1;Parent=g14282.t1 NODE_1374_length_11710_cov_40.1206 AUGUSTUS CDS 6099 6308 . - 0 ID=cds.g14282.t1;Parent=g14282.t1 #PROT g14282.t1 g14282 MEAQMVATAVQAGPTIIESFCALIRLAYAGTGVPKAAQRDIALARVEGRYVGTTSIDHLEERAFPELFP* # PASA_UPDATE: g14283.t1, single gene model update, valid-1, status:[pasa:asmbl_1388,status:12], valid-1 NODE_1374_length_11710_cov_40.1206 . gene 8011 10904 . - . ID=g14283;Name=g14283.t1 NODE_1374_length_11710_cov_40.1206 . mRNA 8011 10904 . - . ID=g14283.t1;Parent=g14283;Name=g14283.t1 NODE_1374_length_11710_cov_40.1206 . five_prime_UTR 10863 10904 . - . ID=g14283.t1.utr5p1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . exon 10788 10904 . - . ID=g14283.t1.exon1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . CDS 10788 10862 . - 0 ID=cds.g14283.t1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . exon 10438 10500 . - . ID=g14283.t1.exon2;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . CDS 10438 10500 . - 0 ID=cds.g14283.t1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . exon 9549 9686 . - . ID=g14283.t1.exon3;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . CDS 9549 9686 . - 0 ID=cds.g14283.t1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . exon 8827 9105 . - . ID=g14283.t1.exon4;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . CDS 8827 9105 . - 0 ID=cds.g14283.t1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . exon 8011 8517 . - . ID=g14283.t1.exon5;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . CDS 8404 8517 . - 0 ID=cds.g14283.t1;Parent=g14283.t1 NODE_1374_length_11710_cov_40.1206 . three_prime_UTR 8011 8403 . - . ID=g14283.t1.utr3p1;Parent=g14283.t1 #PROT g14283.t1 g14283 MRPVRLAREAIVSRRYREFHKLNSTLTSKFPHLVGVPRGIPRLPPKVAIGRLSEECVRLRRVELEKYLQIIVGVAELRESAALSDFLCWRAVQTELLLAVDACDTPARAVVQDGAMSAGGVGSGGTTTGGGGQTQQLGKSVDVDRVLKDAEARFESDMTRWIGRLHAAEREKVLVCKICYDRPVHVALQPCGHALLCDVCVGKFEKCPVCRVPIRFTVRIFF* # ORIGINAL: g1879.t1 original gene structure, not modified by PASA NODE_2667_length_5502_cov_41.3212 AUGUSTUS gene 142 2120 . + . ID=g1879;Name=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS mRNA 142 2120 . + . ID=g1879.t1;Parent=g1879;Name=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 142 717 . + . ID=g1879.t1.exon1;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 142 717 . + 1 ID=cds.g1879.t1;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 852 948 . + . ID=g1879.t1.exon2;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 852 948 . + 1 ID=cds.g1879.t1;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 1201 1400 . + . ID=g1879.t1.exon3;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 1201 1400 . + 0 ID=cds.g1879.t1;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 1661 2120 . + . ID=g1879.t1.exon4;Parent=g1879.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 1661 2120 . + 1 ID=cds.g1879.t1;Parent=g1879.t1 #PROT g1879.t1 g1879 PIYSHFSSTLAGLATIRGYGAQDRFFDEFMSKQDANTRAFFLFLVTARWLGQRLDFLCVCFVTATAFFAIFARDRLDGGLVGLSLAYALQLTGLFQWCVRQSAEVENFMTSVERVLEYTHIESEAEPIVEPRPPKEWPSAGAIKFDRMTLRYRPELPPALCNVSVDIKGGSKVGIIGRTGSGKSTLMGSLFRLVEHQGAIWIDGIKIGSVGLLDLRSRLSVIPQDPVLFSGSVRKNLDPFGNHSNEELWAVLGEVQLSQLVKALPGGLEAPLAEAGANFSVGQRQLICLARAILRSNKILVMDEATANVDLNTDALIQATLRRKFADCTVLTIAHRLNTILDSDVILVFDYGNLAEQGTPYQLAFQHEDPGSTAPISHFRKLIDETGRASADQMLGMIRAHHALQGGASTAQGAAVTHDDARPSGTSLGDVEIDVVEIALDAA* # ORIGINAL: g1881.t1 original gene structure, not modified by PASA NODE_2667_length_5502_cov_41.3212 AUGUSTUS gene 4936 5367 . + . ID=g1881;Name=g1881.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS mRNA 4936 5367 . + . ID=g1881.t1;Parent=g1881;Name=g1881.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 4936 5102 . + . ID=g1881.t1.exon1;Parent=g1881.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 4936 5102 . + 0 ID=cds.g1881.t1;Parent=g1881.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS exon 5214 5367 . + . ID=g1881.t1.exon2;Parent=g1881.t1 NODE_2667_length_5502_cov_41.3212 AUGUSTUS CDS 5214 5367 . + 1 ID=cds.g1881.t1;Parent=g1881.t1 #PROT g1881.t1 g1881 MRELNTTQDLKGTGVQAHVSTLINPLANPKGTKHVCELCSKAAYVQCESCRVTFYCGKEHQKVDHDGIHDKICQLLIPLRTTTNILGSEEERQHRERQRIVRQVLA* # PASA_UPDATE: g1880.t1, single gene model update, valid-1, status:[pasa:asmbl_4758,status:3], valid-1 # PASA_UPDATE: g1880.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4757,status:12], valid-1 # PASA_UPDATE: g1880.t1.2.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4759,status:12],[pasa:asmbl_4760,status:12], valid-1 NODE_2667_length_5502_cov_41.3212 . gene 2490 4464 . - . ID=g1880;Name=g1880.t1 NODE_2667_length_5502_cov_41.3212 . mRNA 2490 4464 . - . ID=g1880.t1;Parent=g1880;Name=g1880.t1 NODE_2667_length_5502_cov_41.3212 . five_prime_UTR 4221 4464 . - . ID=g1880.t1.utr5p1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . exon 4218 4464 . - . ID=g1880.t1.exon1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . CDS 4218 4220 . - 0 ID=cds.g1880.t1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . exon 3837 4001 . - . ID=g1880.t1.exon2;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . CDS 3837 4001 . - 0 ID=cds.g1880.t1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . exon 3169 3688 . - . ID=g1880.t1.exon3;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . CDS 3169 3688 . - 0 ID=cds.g1880.t1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . exon 2490 3054 . - . ID=g1880.t1.exon4;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . CDS 2996 3054 . - 2 ID=cds.g1880.t1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . three_prime_UTR 2490 2995 . - . ID=g1880.t1.utr3p1;Parent=g1880.t1 NODE_2667_length_5502_cov_41.3212 . mRNA 2490 4464 . - . ID=g1880.t1.1.5b6be70b;Parent=g1880;Name=g1880.t1 NODE_2667_length_5502_cov_41.3212 . five_prime_UTR 4221 4464 . - . ID=g1880.t1.1.5b6be70b.utr5p1;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 4218 4464 . - . ID=g1880.t1.1.5b6be70b.exon1;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 4218 4220 . - 0 ID=cds.g1880.t1.1.5b6be70b;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 3837 4001 . - . ID=g1880.t1.1.5b6be70b.exon2;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 3837 4001 . - 0 ID=cds.g1880.t1.1.5b6be70b;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 3256 3688 . - . ID=g1880.t1.1.5b6be70b.exon3;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 3256 3688 . - 0 ID=cds.g1880.t1.1.5b6be70b;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 2490 3135 . - . ID=g1880.t1.1.5b6be70b.exon4;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 2996 3135 . - 2 ID=cds.g1880.t1.1.5b6be70b;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . three_prime_UTR 2490 2995 . - . ID=g1880.t1.1.5b6be70b.utr3p1;Parent=g1880.t1.1.5b6be70b NODE_2667_length_5502_cov_41.3212 . mRNA 2490 4464 . - . ID=g1880.t1.2.5b6be70b;Parent=g1880;Name=g1880.t1 NODE_2667_length_5502_cov_41.3212 . five_prime_UTR 4221 4464 . - . ID=g1880.t1.2.5b6be70b.utr5p1;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 4218 4464 . - . ID=g1880.t1.2.5b6be70b.exon1;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 4218 4220 . - 0 ID=cds.g1880.t1.2.5b6be70b;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 3837 4001 . - . ID=g1880.t1.2.5b6be70b.exon2;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 3837 4001 . - 0 ID=cds.g1880.t1.2.5b6be70b;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 3169 3688 . - . ID=g1880.t1.2.5b6be70b.exon3;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 3169 3688 . - 0 ID=cds.g1880.t1.2.5b6be70b;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . exon 2490 3108 . - . ID=g1880.t1.2.5b6be70b.exon4;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . CDS 2996 3108 . - 2 ID=cds.g1880.t1.2.5b6be70b;Parent=g1880.t1.2.5b6be70b NODE_2667_length_5502_cov_41.3212 . three_prime_UTR 2490 2995 . - . ID=g1880.t1.2.5b6be70b.utr3p1;Parent=g1880.t1.2.5b6be70b #PROT g1880.t1 g1880 MSLSKNSKIMKYVNYRMRITIQDSRVLIGTFMAFDKHMNLVLGDCEEFRKVKGKGKGKEEREEKRTLGLVVLRGENVVSMTVEGPPPVDETRSKTGAQAGGPGAGRPAGRGIPIPATSAPPMGGGAPAPGLAGPVRGVGGPAAAMMAPQGRGATLAGAPQQYGPPMGRGGPPPGMPPPGMGMPPRGPPQGMPMGRGMPPPGMGMPPPGMGMPPPGMGMRPPMGMGMPPPGMPMGRGMPPPGMPPRPPQ* #PROT g1880.t1.1.5b6be70b g1880 MSLSKNSKIMKYVNYRMRITIQDSRVLIGTFMAFDKHMNLVLGDCEEFRKVKGKGKGKEEREEKRTLGLVVLRGENVVSMTVEGPPPVDETRSKTGAQAGGPGAGRPAGRGIPIPATSAPPMGGGAPAPGLAGPVRGVGGPAAAMMAPQGRGATLAGAPQQYGPPMGRGGPPPGMPPPGMGMPPRGPPQGMPMGRGMPPPGMPMGMPPPGMPMGRGMPPPGMGMPPPGMPMGRGMPPPGMPPRPPQ* #PROT g1880.t1.2.5b6be70b g1880 MSLSKNSKIMKYVNYRMRITIQDSRVLIGTFMAFDKHMNLVLGDCEEFRKVKGKGKGKEEREEKRTLGLVVLRGENVVSMTVEGPPPVDETRSKTGAQAGGPGAGRPAGRGIPIPATSAPPMGGGAPAPGLAGPVRGVGGPAAAMMAPQGRGATLAGAPQQYGPPMGRGGPPPGMPPPGMGMPPRGPPQGMPMGRGMPPPGMGMPPPGMGMPPPGMGMRPPMGMGMPPPGMPMGRGMPPPGMGMPPPGMPMGRGMPPPGMPPRPPQ* # PASA_UPDATE: g688.t1, single gene model update, valid-1, status:[pasa:asmbl_358,status:3], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 4238 5432 . + . ID=g688;Name=g688.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 4238 5432 . + . ID=g688.t1;Parent=g688;Name=g688.t1 NODE_1094_length_14027_cov_43.5996 . five_prime_UTR 4238 4302 . + . ID=g688.t1.utr5p1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . exon 4238 4366 . + . ID=g688.t1.exon1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . CDS 4303 4366 . + 0 ID=cds.g688.t1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . exon 4453 4625 . + . ID=g688.t1.exon2;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . CDS 4453 4625 . + 2 ID=cds.g688.t1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . exon 4772 5052 . + . ID=g688.t1.exon3;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . CDS 4772 5052 . + 0 ID=cds.g688.t1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . exon 5200 5432 . + . ID=g688.t1.exon4;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . CDS 5200 5359 . + 1 ID=cds.g688.t1;Parent=g688.t1 NODE_1094_length_14027_cov_43.5996 . three_prime_UTR 5360 5432 . + . ID=g688.t1.utr3p1;Parent=g688.t1 #PROT g688.t1 g688 MEVPPNSTLYVNNLNEKIKKQELKKSLYAVFSLFGPILDIVALKTLRMRGQAFVIFRDVACATNALRSMQGFPFYDKPMRIQYAKDKSDAILKLEGAFVPREKKPRGEKPKSVPRKREIPAPDQAPQQISQQIYAPAPVAPVVHEIIVPNQILFLQQLPEETSETMLTVLFNQFKGFKEVRLVPGRHDIAFVEFESEADSGVAMSALQGFKLSATHTLSISYAKK* # PASA_UPDATE: g692.t1, single gene model update, valid-1, status:[pasa:asmbl_353,status:3], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 10255 13240 . - . ID=g692;Name=g692.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 10255 13240 . - . ID=g692.t1;Parent=g692;Name=g692.t1 NODE_1094_length_14027_cov_43.5996 . five_prime_UTR 13146 13240 . - . ID=g692.t1.utr5p1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 12746 13240 . - . ID=g692.t1.exon1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 12746 13145 . - 0 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 12561 12664 . - . ID=g692.t1.exon2;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 12561 12664 . - 2 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 12285 12461 . - . ID=g692.t1.exon3;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 12285 12461 . - 0 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 12101 12200 . - . ID=g692.t1.exon4;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 12101 12200 . - 0 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 11931 11991 . - . ID=g692.t1.exon5;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 11931 11991 . - 2 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 11412 11845 . - . ID=g692.t1.exon6;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 11412 11845 . - 1 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 11025 11324 . - . ID=g692.t1.exon7;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 11025 11324 . - 2 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 10578 10929 . - . ID=g692.t1.exon8;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 10578 10929 . - 2 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . exon 10255 10474 . - . ID=g692.t1.exon9;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . CDS 10297 10474 . - 1 ID=cds.g692.t1;Parent=g692.t1 NODE_1094_length_14027_cov_43.5996 . three_prime_UTR 10255 10296 . - . ID=g692.t1.utr3p1;Parent=g692.t1 #PROT g692.t1 g692 MDGSAAAGVAQAGQGDGTAGNGTYDANTHLTSWPTASHNVAQTPLHSTLGLGTSASMYSDIGHGAVGVDAGEDGLADDPQRKRGASDGAIPDPASMSPTLSRTDRSRLRRDIKKDEEFHSLFPNIPPTELLLYDYSCALQKDILLHGRLFVTEKAIYFRSNILGWETTAILPFIDVAAITKERTALFIPNAIQITTREAKYTFSSFISRDQTYANIWRVWRTARQEQAFSVDGMPVDMPMDDGGMEILSGARDSPQTGDEGCISDGQVDTLGEVGVAASSRRVAQSRRFTAPSISLQAGATPSVAAPGLLRNGSDMPVPIAATPFTFSEAPSSPPGPSGLSPPVDTPLSQPSPQLPLVPLAAQSSPSAEVTVGAESMSDVACGCALHPVKEVFDDVFDANPATLYSLLFTDSPFFREVFASRQNNNLVAGVWVDGRRELSYTTPVKAKMGPPVAECNEKQRLVVPAVPSRYIVETEVITPNVPYGDTFAIVSRYCITSVAANKARVKMFCEVKFLKSGWSVNLAKGFIESNCYDGLKDYSSELRTRLSRYVSERSSITTTVSQSVEPTAIKRPSIQRPVAVPATPKPQQQLGRLVTPATALLLILSLLLLAANMLLFIRLHDVETRFAAWQADLNGEIASIFGSDVPATGEGWVARLQQLQHAHAKERMKWIHSIERLRHGLGAVADVLNSSVDGASSPGN* # ORIGINAL: g689.t1 original gene structure, not modified by PASA NODE_1094_length_14027_cov_43.5996 AUGUSTUS gene 5480 6847 . - . ID=g689;Name=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS mRNA 5480 6847 . - . ID=g689.t1;Parent=g689;Name=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 6624 6847 . - . ID=g689.t1.exon1;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 6624 6847 . - 0 ID=cds.g689.t1;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 6466 6520 . - . ID=g689.t1.exon2;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 6466 6520 . - 1 ID=cds.g689.t1;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 5949 6378 . - . ID=g689.t1.exon3;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 5949 6378 . - 0 ID=cds.g689.t1;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 5480 5862 . - . ID=g689.t1.exon4;Parent=g689.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 5480 5862 . - 2 ID=cds.g689.t1;Parent=g689.t1 #PROT g689.t1 g689 MGCAASSSLAGSTPEGDSSVPAKKLERKSERKSGWEECDVADDMPVKVRRLEKKTEVEAVTGVQPPGTLATSGHVSERHSVVRDDSVAKLEDENRRLHFDVAHLRALLESSESRVVALTDRLDASERQVEELRSSAERIPARETSARSRRMSGHGGNMACAEDLERAVEAHAAFARRLEEELARAHAEGAKMKDHYERRLKKLKTTSARSKAEYALSMFELKDEKSQLQEELSKLKDEVTSYKSRQSSASGARGGSGKAAGREIAIDGESGRGSAGGASESAAGEGDEADEGAGGHMRLIVDLSQQVASLDDQLTCARAEIERLEGMLGSATSNNVDFRGIDGGDSATADREPTQLRMAVHAV* # PASA_UPDATE: g691.t1, single gene model update, valid-1, status:[pasa:asmbl_355,status:12],[pasa:asmbl_360,status:12], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 8818 9913 . + . ID=g691;Name=g691.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 8818 9913 . + . ID=g691.t1;Parent=g691;Name=g691.t1 NODE_1094_length_14027_cov_43.5996 . five_prime_UTR 8818 8864 . + . ID=g691.t1.utr5p1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . exon 8818 8908 . + . ID=g691.t1.exon1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . CDS 8865 8908 . + 0 ID=cds.g691.t1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . exon 8994 9069 . + . ID=g691.t1.exon2;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . CDS 8994 9069 . + 1 ID=cds.g691.t1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . exon 9168 9257 . + . ID=g691.t1.exon3;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . CDS 9168 9257 . + 0 ID=cds.g691.t1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . exon 9349 9913 . + . ID=g691.t1.exon4;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . CDS 9349 9897 . + 0 ID=cds.g691.t1;Parent=g691.t1 NODE_1094_length_14027_cov_43.5996 . three_prime_UTR 9898 9913 . + . ID=g691.t1.utr3p1;Parent=g691.t1 #PROT g691.t1 g691 MAFAEAQLKKFGWKRGKGLGRNEDGSADALRVNLKFDQHGVGHANDMGFHWWNHAFNKAASNIVIEQDTTDGTVRVVAKKDDPTLVSANRPSKKATNMLYGAFVRASEPTSPDDSDSSSEKPTKETKDFSVLLPEDALFQACGGRTAHKAARHGHNLDGKLQRILDQEREFHSKKEKRELEESEGEEDVKKPKRSKREVDSEEAVNEVKAKKAKKEDKERRRKERKEKKAKSGHAEGVRKEEKRKKEKKSKK* # ORIGINAL: g690.t1 original gene structure, not modified by PASA NODE_1094_length_14027_cov_43.5996 AUGUSTUS gene 7145 8528 . - . ID=g690;Name=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS mRNA 7145 8528 . - . ID=g690.t1;Parent=g690;Name=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 8526 8528 . - . ID=g690.t1.exon1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 8526 8528 . - 0 ID=cds.g690.t1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 8353 8420 . - . ID=g690.t1.exon2;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 8353 8420 . - 0 ID=cds.g690.t1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 8134 8253 . - . ID=g690.t1.exon3;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 8134 8253 . - 1 ID=cds.g690.t1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 7794 8029 . - . ID=g690.t1.exon4;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 7794 8029 . - 1 ID=cds.g690.t1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 7352 7587 . - . ID=g690.t1.exon5;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 7352 7587 . - 2 ID=cds.g690.t1;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS exon 7145 7264 . - . ID=g690.t1.exon6;Parent=g690.t1 NODE_1094_length_14027_cov_43.5996 AUGUSTUS CDS 7145 7264 . - 0 ID=cds.g690.t1;Parent=g690.t1 #PROT g690.t1 g690 MPQNEYIEQAIKRHGYRLDHFEKQRKKEAREAHTRADYAQNVKGLKAKLYNKQRHAEKIQMKKTIKMHEERSNKQRDDDAVPQGAVPAYLLDREGQSRAKVLSNMVKQKRKEKAGKWNVPLPKVRGMGEDEVFRVIKTGKRKAKAWKRFVTKVTFVGDGFTRKPPKFERFIRPMGLRFKKAHVTHPELAATFNLPIIGVKKNPQSPMYTQLGVITKGTIIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV* # PASA_UPDATE: g687.t1, single gene model update, valid-1, status:[pasa:asmbl_352,status:12], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 1696 4042 . - . ID=g687;Name=g687.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 1696 4042 . - . ID=g687.t1;Parent=g687;Name=g687.t1 NODE_1094_length_14027_cov_43.5996 . five_prime_UTR 4035 4042 . - . ID=g687.t1.utr5p1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 3812 4042 . - . ID=g687.t1.exon1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 3812 4034 . - 0 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 3370 3707 . - . ID=g687.t1.exon2;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 3370 3707 . - 2 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 3141 3269 . - . ID=g687.t1.exon3;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 3141 3269 . - 0 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 2942 3052 . - . ID=g687.t1.exon4;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 2942 3052 . - 0 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 2575 2836 . - . ID=g687.t1.exon5;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 2575 2836 . - 0 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 2228 2425 . - . ID=g687.t1.exon6;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 2228 2425 . - 2 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . exon 1696 2130 . - . ID=g687.t1.exon7;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . CDS 1766 2130 . - 2 ID=cds.g687.t1;Parent=g687.t1 NODE_1094_length_14027_cov_43.5996 . three_prime_UTR 1696 1765 . - . ID=g687.t1.utr3p1;Parent=g687.t1 #PROT g687.t1 g687 MNRPVIGRALCAWRLVAYAAVRPPSTQRPITCAAQPEGRSWHVPRLFRTLSHNRNKRSDSLKTASSQRRTAVRGVSVSTLDSVVKIYAVATAPNYILPWSMKPQKESTGSGFVIEGRRVLTNAHVVANHTAVMVRKHGSPVKYMATVEHAGHECDLATLRIDDNEFWHDLPPLQFGDVPSLQDRVTIIGYPTGGDAISLSAGVISRVEFQQYVHGAAHLPSCQVDAAINPGNSGGPALRDDRVVGVAFQHLPGAESIGYIIPVPVIEHFLEDVRRNGRYTGFSQFGVVCQSLENGQLRCRLGMPAGRTGVRVAKALPLHPSSDVLRPNDVIMEVDGTRVANDGTIAFRNKERINFHYILMDKFIGDSVKLLLWRDRKEATVELALATVPPLVPSHQYDTSPSYLIHAGLVFVPLVQPYLHEWGADWWNTSPRKLSARALFGMRKAHDEEIVILSQILADEANAGYGSATNLELRSLNGTRVVNLKHLASLVTQNTEPYLWFEFEDDVCVCLDRQVAADATARILESHRIPSPMSRDLLAAV* # PASA_UPDATE: g686.t1, single gene model update, valid-1, status:[pasa:asmbl_357,status:12], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 67 1567 . + . ID=g686;Name=g686.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 67 1567 . + . ID=g686.t1;Parent=g686;Name=g686.t1 NODE_1094_length_14027_cov_43.5996 . exon 67 297 . + . ID=g686.t1.exon1;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 67 297 . + 0 ID=cds.g686.t1;Parent=g686.t1;5_prime_partial=true NODE_1094_length_14027_cov_43.5996 . exon 383 511 . + . ID=g686.t1.exon2;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 383 511 . + 0 ID=cds.g686.t1;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . exon 614 692 . + . ID=g686.t1.exon3;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 614 692 . + 0 ID=cds.g686.t1;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . exon 824 1203 . + . ID=g686.t1.exon4;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 824 1203 . + 2 ID=cds.g686.t1;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . exon 1302 1362 . + . ID=g686.t1.exon5;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 1302 1362 . + 0 ID=cds.g686.t1;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . exon 1506 1567 . + . ID=g686.t1.exon6;Parent=g686.t1 NODE_1094_length_14027_cov_43.5996 . CDS 1506 1567 . + 2 ID=cds.g686.t1;Parent=g686.t1 #PROT g686.t1 g686 SAEYDTAILTEIQELCKRNAASQALKAHAAPAATSLPRGANAVSSALAHLPPKGMRGPPPPVPRRQSTGGVAPPMMAPPDDDKFSFNADHANKQIKLFFDALGSIDPATTRPETAAVFLKDIRDKCLSFKPGLVRLIEATRDAHALGTLMKLNEDLTLALEKHDRLLGTCQQRLLLLQQQQQQQQQQQQQPQPQQQQQQELGAMPFNAATEQNAAHGSGGDVPGGSVMRILPLDPMNPYALGPGALSSGSSASAYDDSWADVVRNDALDGFPEAAAALDFKGQPADISWTACTDTGIAIDPSLAEENPFSSDA* # PASA_UPDATE: g693.t1, single gene model update, valid-1, status:[pasa:asmbl_356,status:12], valid-1 NODE_1094_length_14027_cov_43.5996 . gene 13439 13951 . + . ID=g693;Name=g693.t1 NODE_1094_length_14027_cov_43.5996 . mRNA 13439 13951 . + . ID=g693.t1;Parent=g693;Name=g693.t1 NODE_1094_length_14027_cov_43.5996 . five_prime_UTR 13439 13504 . + . ID=g693.t1.utr5p1;Parent=g693.t1 NODE_1094_length_14027_cov_43.5996 . exon 13439 13951 . + . ID=g693.t1.exon1;Parent=g693.t1 NODE_1094_length_14027_cov_43.5996 . CDS 13505 13951 . + 0 ID=cds.g693.t1;Parent=g693.t1 #PROT g693.t1 g693 MGGVLGSLGSLGLGSLGSSLATNLGCCVSSAACRLCCRSCPTLRSSLATRIAYTVLFLVFSVGAWVMLTDWAGRELAKVPRLASGLIESHCLVEGGCSVQGIVGILGVYRVCFALSVFFGLMSVVMIGVRSGKDPRRGLQNGCAASLT* # PASA_UPDATE: g10339.t1, single gene model update, valid-1, status:[pasa:asmbl_4609,status:12], valid-1 NODE_2595_length_5759_cov_34.7285 . gene 308 3417 . - . ID=g10339;Name=g10339.t1 NODE_2595_length_5759_cov_34.7285 . mRNA 308 3417 . - . ID=g10339.t1;Parent=g10339;Name=g10339.t1 NODE_2595_length_5759_cov_34.7285 . exon 2305 3417 . - . ID=g10339.t1.exon1;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . CDS 2305 3417 . - 0 ID=cds.g10339.t1;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . exon 1871 1999 . - . ID=g10339.t1.exon2;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . CDS 1871 1999 . - 0 ID=cds.g10339.t1;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . exon 1294 1628 . - . ID=g10339.t1.exon3;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . CDS 1294 1628 . - 0 ID=cds.g10339.t1;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . exon 887 1046 . - . ID=g10339.t1.exon4;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . CDS 887 1046 . - 1 ID=cds.g10339.t1;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . exon 308 598 . - . ID=g10339.t1.exon5;Parent=g10339.t1 NODE_2595_length_5759_cov_34.7285 . CDS 308 598 . - 0 ID=cds.g10339.t1;Parent=g10339.t1;3_prime_partial=true #PROT g10339.t1 g10339 MSRLVLTIGSAARSQALIAAITRSSVRTLASASVTKGGLSPLDTFDRRHIGTTDKKDVDAMLAACKVASLEELIEKTVPANILLKKDLELEQPRSESELLDYLKNEIASQNQVFRSYIGMGYANALTPTVILRNIMENPGWYTQYTPYQPEVAQGRLESLLNFQTMIKDLTRLDVANASLLDEATAAAEAMAIAFQVGNRRKFKFIVDENAHPQTIALLNTRAGPFGVEIVPTAIDKIDFSKKDICGVLVQYPDTNGRIVDHKALADEAHKSGALFCVAADLLALTVIKPPGEFGADICIGNSQRFGVPLGFGGPHAAFFATSEKLTRRMPGRLIGVSRDAQGGVAYRLSLQTREQHIRREKATSNICTAQALLANMSAMFAVYHGPKGLKDIATRVHSLAVVLQDGVERAGHKVHEGAFFDTVRVYPSQGSSAAIAQRAKDRRINLRNFNDGSFGVTVDETVTSRDLADLYAVFGVPQSVTPDAVYGQIVESASRKFHFGALSRTSEYLTHPVFNSHHSETHILRYMKRLENKDVSLCHSMVPLGSCTMKLNATTEMIPVTWPEFNALHPFAPIEQTLGYRRLFEDLQKDLCEITGYDAFSLQPNSGANGEYAGLLTITSYLKDIGQGHRNVCLIPVSAHGTNPASAQMAGMDIVIVDTDKHGNVDIADLKHKAE # ORIGINAL: g10340.t1 original gene structure, not modified by PASA NODE_2595_length_5759_cov_34.7285 AUGUSTUS gene 4020 5522 . - . ID=g10340;Name=g10340.t1 NODE_2595_length_5759_cov_34.7285 AUGUSTUS mRNA 4020 5522 . - . ID=g10340.t1;Parent=g10340;Name=g10340.t1 NODE_2595_length_5759_cov_34.7285 AUGUSTUS exon 5327 5522 . - . ID=g10340.t1.exon1;Parent=g10340.t1 NODE_2595_length_5759_cov_34.7285 AUGUSTUS CDS 5327 5522 . - 0 ID=cds.g10340.t1;Parent=g10340.t1 NODE_2595_length_5759_cov_34.7285 AUGUSTUS exon 4020 5077 . - . ID=g10340.t1.exon2;Parent=g10340.t1 NODE_2595_length_5759_cov_34.7285 AUGUSTUS CDS 4020 5077 . - 2 ID=cds.g10340.t1;Parent=g10340.t1 #PROT g10340.t1 g10340 MWEICKTKGDAEKEVDRTIKYIQDTIVQVKQLENNQNSLICESGVVAQIKRVPLGVVLCAGPFNYPLNETYTTLLPALFMGNTVVLKTPRTGCLCHVPTLNVFRDVFPPGVVNIVHGSGRDIMPTIMKTGLVDVFAFIGTHKAASELQRAHPFPHKLRTVLGLDAKNPAIVLADADINVAVSECILGSLSYNGQRCTAIKIIFVHESITESFIPKFAAAVDALQMGLPWTSGTAITPLAEPQKPDFLVEMIKDAIAKGASIVNERGGKVDRSIVSPTVLYPVSKDMMAYSMEQFGPVVPVVPFKSIEEVYDFVVDTSFGQQAAIFSSNPESVPDLIDVLAHQVSRININAQCQRGPDSFPFTGRKNSAYGTLSVLDALRTMSIRTVVATKESEKNVRLIEDVMLERRSRFVRSEFLF* # ORIGINAL: g8945.t1 original gene structure, not modified by PASA NODE_3392_length_3570_cov_38.5302 AUGUSTUS gene 2429 3214 . - . ID=g8945;Name=g8945.t1 NODE_3392_length_3570_cov_38.5302 AUGUSTUS mRNA 2429 3214 . - . ID=g8945.t1;Parent=g8945;Name=g8945.t1 NODE_3392_length_3570_cov_38.5302 AUGUSTUS exon 3147 3214 . - . ID=g8945.t1.exon1;Parent=g8945.t1 NODE_3392_length_3570_cov_38.5302 AUGUSTUS CDS 3147 3214 . - 0 ID=cds.g8945.t1;Parent=g8945.t1 NODE_3392_length_3570_cov_38.5302 AUGUSTUS exon 2429 2627 . - . ID=g8945.t1.exon2;Parent=g8945.t1 NODE_3392_length_3570_cov_38.5302 AUGUSTUS CDS 2429 2627 . - 1 ID=cds.g8945.t1;Parent=g8945.t1 #PROT g8945.t1 g8945 MVASSLAAPVFGFVDHVALQALWYAVAGTTLASGFSYMFSKDAVRILQQRVTKGRKAHDAIATKGKTNADDATRDVRPPAPASKERKE* # PASA_UPDATE: g8944.t1, single gene model update, valid-1, status:[pasa:asmbl_5985,status:12], valid-1 NODE_3392_length_3570_cov_38.5302 . gene 260 1930 . + . ID=g8944;Name=g8944.t1 NODE_3392_length_3570_cov_38.5302 . mRNA 260 1930 . + . ID=g8944.t1;Parent=g8944;Name=g8944.t1 NODE_3392_length_3570_cov_38.5302 . exon 260 419 . + . ID=g8944.t1.exon1;Parent=g8944.t1 NODE_3392_length_3570_cov_38.5302 . CDS 260 419 . + 0 ID=cds.g8944.t1;Parent=g8944.t1;5_prime_partial=true NODE_3392_length_3570_cov_38.5302 . exon 595 859 . + . ID=g8944.t1.exon2;Parent=g8944.t1 NODE_3392_length_3570_cov_38.5302 . CDS 595 859 . + 2 ID=cds.g8944.t1;Parent=g8944.t1 NODE_3392_length_3570_cov_38.5302 . exon 1275 1930 . + . ID=g8944.t1.exon3;Parent=g8944.t1 NODE_3392_length_3570_cov_38.5302 . CDS 1275 1644 . + 1 ID=cds.g8944.t1;Parent=g8944.t1 NODE_3392_length_3570_cov_38.5302 . three_prime_UTR 1645 1930 . + . ID=g8944.t1.utr3p1;Parent=g8944.t1 #PROT g8944.t1 g8944 GQYGIPYFNINFLDGVVNTLAYRGWAQDAIGITGYWRDPYKPDEFLASAQYLPDLNNIKPGQYNATYKRNILSLNTFVMSYSQIDDVIVPPRSGWFEFFQPNSRTNVTDLKDDVLYANDTIGLRTLDETGRLVYLIDECTHSAHESDDCGRRWFINDQLSYLDNTLDEASLALVFGTPGTNNNNEKDESYEYRGGVFGSGAVAGVIAACVGIAAGVVGVTLYFVHRRKETAQEREWIPLLDSSSPITCPPDAASRAYAAIDSTA* # ORIGINAL: g4773.t1 original gene structure, not modified by PASA NODE_2170_length_7434_cov_44.2099 AUGUSTUS gene 3167 3526 . - . ID=g4773;Name=g4773.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS mRNA 3167 3526 . - . ID=g4773.t1;Parent=g4773;Name=g4773.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 3167 3526 . - . ID=g4773.t1.exon1;Parent=g4773.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 3167 3526 . - 0 ID=cds.g4773.t1;Parent=g4773.t1 #PROT g4773.t1 g4773 MRGAWSTAISAGTTISRLPWTASSPSTWELCAKVDKGAAPWPTTALLSKEYWPTRAGEEPWTPRHDLQQMVRLMWTAPVAQEEVGVPAHVLDDPAIRCVLDELMDPNATAEKGLATLLM* # ORIGINAL: g4775.t1 original gene structure, not modified by PASA NODE_2170_length_7434_cov_44.2099 AUGUSTUS gene 6772 7259 . + . ID=g4775;Name=g4775.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS mRNA 6772 7259 . + . ID=g4775.t1;Parent=g4775;Name=g4775.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 6772 6921 . + . ID=g4775.t1.exon1;Parent=g4775.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 6772 6921 . + 0 ID=cds.g4775.t1;Parent=g4775.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 7137 7259 . + . ID=g4775.t1.exon2;Parent=g4775.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 7137 7259 . + 0 ID=cds.g4775.t1;Parent=g4775.t1 #PROT g4775.t1 g4775 MSTIPSTPHGPIERTQSTTNFKEISLKAAESSMKRAVTRLIETAPVNERKAFSKEMSGFQELFCRFLEESGQTIDWNLINPPPEDKVCVR* # ORIGINAL: g4772.t1 original gene structure, not modified by PASA NODE_2170_length_7434_cov_44.2099 AUGUSTUS gene 885 2613 . + . ID=g4772;Name=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS mRNA 885 2613 . + . ID=g4772.t1;Parent=g4772;Name=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 885 922 . + . ID=g4772.t1.exon1;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 885 922 . + 0 ID=cds.g4772.t1;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 1017 1073 . + . ID=g4772.t1.exon2;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 1017 1073 . + 1 ID=cds.g4772.t1;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 1183 1584 . + . ID=g4772.t1.exon3;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 1183 1584 . + 1 ID=cds.g4772.t1;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 1671 2427 . + . ID=g4772.t1.exon4;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 1671 2427 . + 1 ID=cds.g4772.t1;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS exon 2560 2613 . + . ID=g4772.t1.exon5;Parent=g4772.t1 NODE_2170_length_7434_cov_44.2099 AUGUSTUS CDS 2560 2613 . + 0 ID=cds.g4772.t1;Parent=g4772.t1 #PROT g4772.t1 g4772 MPHSTKTQLNNSWSHIVARWMKRRNLQYTKMSDVLEGFEKFDFPEALRESGLTETQANSPFDALDTYYMWLHFETDPEAAVSLHSDSDASDGSGATATASRKSTRRKRNGDCECGGPRKRTKVVSDLADSPCNACESAHATTEGTRNTLSIPERSQFYNAITACIRDGSGAYPEWYAMFLSMRSMAIRFDPVVSKAHRHHVLGPQYQSILLMSHLLANPTYGEALLDACVMMGAFDTKCVKVMSGRLRGAQLLAELFPTHKRDIVIARLLQRLNLVAFLKHKSAFDGALPGASVDASLDGMTLPTRGLEEEKMWCLFAKDLCQPGYKRNYAGSTKIYSACPMCCCIHTTPRHARHTAHALRRALVFLMEARDDFREYAAPIVAGFVSAFPSRALSYVGREFEGQLGGAFEQTILYPTMDSSEVEEPEVGRDGHAF* # PASA_UPDATE: g4774.t1, single gene model update, valid-1, status:[pasa:asmbl_3678,status:12], valid-1 NODE_2170_length_7434_cov_44.2099 . gene 3882 5885 . - . ID=g4774;Name=g4774.t1 NODE_2170_length_7434_cov_44.2099 . mRNA 3882 5885 . - . ID=g4774.t1;Parent=g4774;Name=g4774.t1 NODE_2170_length_7434_cov_44.2099 . exon 3882 5885 . - . ID=g4774.t1.exon1;Parent=g4774.t1 NODE_2170_length_7434_cov_44.2099 . CDS 3981 5885 . - 0 ID=cds.g4774.t1;Parent=g4774.t1 NODE_2170_length_7434_cov_44.2099 . three_prime_UTR 3882 3980 . - . ID=g4774.t1.utr3p1;Parent=g4774.t1 #PROT g4774.t1 g4774 MAQCSSKSLPSRKLAATVLIDYDNSPLAASQLASVDFHEDVVSVYLFTNLSFFGHLEKAYPTAKIIPVRRFKQEGDMIMAVVAGQLDATLGLDTALCLVSADAIFESIAWTVGTHLPHIAALRRESNDSTGKKGRTCVRIDPTREHAGLRVASLISRNECRGRASELTNELVRLRQSEAVDTALKCAHNKGMAELDVQDAVMAAVDKQLAVDTSMREALAKYALNGTFVIALELLRMHHNGGDPRERATISRVPAAALKLHTGAKSHPDISVAEMEAALDELCAQLAEFVKSQTSSAGHTPMPNDGGILQRANDTSEATADFAHATKERKFLASVGVAKGLIYEGLQDVREREHSFAFTPFRAAFKEMAIAAISLFGLPPPPRYTVPVALAELRSNARMSAPWVAWVDLLEDVHVQIRSAQGGVPVGSLAEVKTRWAGTAIALRLMHLLVQLACPRGQTNKAVSTLGARLASQSPQPSHPGLPEVERPGGVPNGDSESAVDVDSLLSQASAPFLAPAAVFVREGLDDVQKRPNGFAFDPFRTALKQLLVAALARRGKSGVFKWSTPQLISALEKDVSSIWEPFVAQCRRIHESIKTAHGGNAGVLTRDRNRESGLAAARMLASAMLVLQQLPSE* # PASA_UPDATE: g7981.t1, single gene model update, valid-1, status:[pasa:asmbl_4881,status:12], valid-1 NODE_2718_length_5359_cov_68.5795 . gene 329 4842 . - . ID=g7981;Name=g7981.t1 NODE_2718_length_5359_cov_68.5795 . mRNA 329 4842 . - . ID=g7981.t1;Parent=g7981;Name=g7981.t1 NODE_2718_length_5359_cov_68.5795 . five_prime_UTR 4723 4842 . - . ID=g7981.t1.utr5p1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 4246 4842 . - . ID=g7981.t1.exon1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 4246 4722 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 3970 4002 . - . ID=g7981.t1.exon2;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 3970 4002 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 3268 3687 . - . ID=g7981.t1.exon3;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 3268 3687 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 2740 2811 . - . ID=g7981.t1.exon4;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 2740 2811 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 2458 2595 . - . ID=g7981.t1.exon5;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 2458 2595 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 2052 2252 . - . ID=g7981.t1.exon6;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 2052 2252 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 1638 1748 . - . ID=g7981.t1.exon7;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 1638 1748 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 1073 1480 . - . ID=g7981.t1.exon8;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 1073 1480 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 756 838 . - . ID=g7981.t1.exon9;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 756 838 . - 0 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 512 602 . - . ID=g7981.t1.exon10;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 512 602 . - 1 ID=cds.g7981.t1;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . exon 329 377 . - . ID=g7981.t1.exon11;Parent=g7981.t1 NODE_2718_length_5359_cov_68.5795 . CDS 329 377 . - 0 ID=cds.g7981.t1;Parent=g7981.t1;3_prime_partial=true #PROT g7981.t1 g7981 MPGGSGESVPGDSSANAGLVDGAVLPPTENASTESSSVAHNRIEELTLESPSRPSTPNNGNGSPRLSGDMTRQRSLTMPAQPKFTVTRPTVRRGDRKSKDDSAIRELSAEGSESADPAGPRSELDKQQSHGDPLLSSSSADQLSATSPNSPSAGNVKNKIASSFGSNFRKFRDSFFAAPKKADGTPPTEEGGLKKSPSQSSGRRGRGRSPSPTPSARPASAVATTEATEATHKEEDSVTVKPPVSPQTSQTQLIKKKGGDVMPVNDVAVPSLATDVTASPRAALKSPAEQQTSSGLRKKGGPKSSVPQGTGLDAALKEALPANATITHDLSEYREKNWRQCFAPDVLSAMTRDDEKIADHLWEVFTSEVAYLEYLLIIIEGFIKPLREMRARGYLADVSEAQLFVNLQHVFIVNEGIVRTILRKVTRPDDKCLNRLAPEHVVECYYDFETTFGCYRDYAAGFSESRAYLEFLCKSNDEFAAFIRWCESRPLCRRLDLKGLMCAPIQRLTKYPLFFSDIFKRVSQMVASDDNNSNGSATNADSAPSSPSSHASVSSSTPNALSSGRRQLLKDVERLKGRSQLFLAGINATIRERESLARLRQIDACMVWVRDPLNPDEIPPDFKLSVPGRLVLHEGRLFKAGSIRLNERHVFLFNDSLLVAKTRKEILSKSEQYITNKPPIPIADVRITDISDEE # PASA_UPDATE: g11544.t1, single gene model update, valid-1, status:[pasa:asmbl_4417,status:3], valid-1 NODE_248_length_29299_cov_41.9291 . gene 18520 23124 . + . ID=g11544;Name=g11544.t1 NODE_248_length_29299_cov_41.9291 . mRNA 18520 23124 . + . ID=g11544.t1;Parent=g11544;Name=g11544.t1 NODE_248_length_29299_cov_41.9291 . five_prime_UTR 18520 18594 . + . ID=g11544.t1.utr5p1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . exon 18520 18861 . + . ID=g11544.t1.exon1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . CDS 18595 18861 . + 0 ID=cds.g11544.t1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . exon 19071 19529 . + . ID=g11544.t1.exon2;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . CDS 19071 19529 . + 0 ID=cds.g11544.t1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . exon 19751 22132 . + . ID=g11544.t1.exon3;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . CDS 19751 22132 . + 0 ID=cds.g11544.t1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . exon 22337 23124 . + . ID=g11544.t1.exon4;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . CDS 22337 22984 . + 0 ID=cds.g11544.t1;Parent=g11544.t1 NODE_248_length_29299_cov_41.9291 . three_prime_UTR 22985 23124 . + . ID=g11544.t1.utr3p1;Parent=g11544.t1 #PROT g11544.t1 g11544 MTGRRTTGIILLCVGVALLALGLGIGLGLPTYVYRQVDSKVYWPTSVDDSKYGDWLNNDDYDDVPMYNHVYMFNITNPTGFLKNQENPYIREIGPYIYRYIKRKIDVTWDATGEFVQFKEFGYQLFQPSLSPAGLNPKTDNVFQLNNVYLRALTLVRSSAVLSSVFNALFSNSTLPASCNALTPTTYLGSSACVAAIRALPLYTATIASTAADQTLFAFMVPTMAKAIFDFTNQTMRAVTQSNLIAKIPVTFGGAIVKSVQGTTIHSVAVTVLQGSSLPMFEVACDFSTTADECSEAMFSLNPTIDCATLPNIAPLCTGGDTTVSFALAAARAYLSATASLTVTWAQWSGMLGLATDPIGSDPNHILYNMTKVPPSYGVFRWMNPSQEASLATAFGVPAAQVAVTRNLLNTTLIALDEKFADGMGSFYVVAPLSNGGVFPTAVAQVTPVQLAMYQLGACGVMGTTVSFGLTPTFSSLVAQFAALGRPLPFASTVTSLELFSFAVRNFPRPSEYATQYPAVKGSLTISPLTLDQTTSVYTTLQSTQKFGSFFSAAADMRAQEAVIKPKVRAALSSILSTDMSNALKYGVYPAMASAAAFYFSNYKTTTGLVPSECSACNATNTCVASKYTPGNSAAACFEWAQAQSDFDDVAISSSSSPANTNLTLINDIYSGCNAYLAVGIEQAINNSDFDRALCYQAIYDQLPGLVPSVQAVITSCNVDKFVVLERRIYAALYYGTDTVRNACGTALKDATIAAPALALNKALALAAGAFDFTLSNWRMSTLSTFENTKFNVDVIFGYVVATIFPMIAKYFDGSNRGLVVRRKVEDFTLGHFSDDFYVALTGGLLGPAPGFLANYTSEAEAHTYGSAYKYNTGVGNRGLIGSYAGRDGSASVLSTYYPSVAANRPELMKFRGSDGSQFHPAKKQLVLLNFAKPYADSYDVWVTQVSRAVPVLREDHFKVHGITVNLFRLKETLLQMSDPVNVDYGVPYDGLQPVSNEKGFLAYVSRPMFLYGDPRLAAIFAPTLPAANKELHDSYIAIEPITGTAMQSRKRLQGNQGIDTTYVTAPFSGTYMGYNMNATYINKPIPYYWVGEYGDITSSKASDFKRLIYGASRGAVAALVVGIVSGIVLCVIGAVLIATNKDTGSRRVAPSKVVPEEERHAPELEHVEMQTGTVASNAPVVETHAPPAEAPVQTAPSKSKTHAVHTNDEAEKPPSSRPASAGEEHSESAKGHAAAKGSGAAKGAHKTTKG* # ORIGINAL: g11542.t1 original gene structure, not modified by PASA NODE_248_length_29299_cov_41.9291 AUGUSTUS gene 7448 11346 . + . ID=g11542;Name=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS mRNA 7448 11346 . + . ID=g11542.t1;Parent=g11542;Name=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 7448 8531 . + . ID=g11542.t1.exon1;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 7448 8531 . + 0 ID=cds.g11542.t1;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 8684 8960 . + . ID=g11542.t1.exon2;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 8684 8960 . + 2 ID=cds.g11542.t1;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 9301 11033 . + . ID=g11542.t1.exon3;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 9301 11033 . + 1 ID=cds.g11542.t1;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 11195 11346 . + . ID=g11542.t1.exon4;Parent=g11542.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 11195 11346 . + 2 ID=cds.g11542.t1;Parent=g11542.t1 #PROT g11542.t1 g11542 MASSRRNCFGEDSGVSIVDALLPCHYEGQTIACDNDDAKSFTFHTYVPRRRIVSHALIAPPSLTPSSRGTSMSRTLPTARRIHSASAWAAFLLFACVCASSLCGAATAAPNHFKVGLLYPFSVPADPLVGVYGLEQGDLVDMLVGLINSRNSSLVRSVLSTNITLEVVRRNEGSDQQVALFGVIALDQQENVDLVIGADWSACSMLANFYLSGVGKMQISASSTSTALEDRTLYPTFMRFVPADGQQGTALAYLVRSLGWDSVAAIIADDDYAKPLTAKFRTVALSMNITIVQTQQVARSGDPTEQVRAIKQSGAKIILVITFTELAKSILLAFQAEGMATKDYVYIGTDGWLYSSVFRELGLINFQGGILGILPFYGGGRAYEQMLDEMTAFQAANASRLVQFDPAKRELYSPYQAYMYDTVIAVAAGLSKFASVGGLSLPANVSQLYSIMNNITFNGSTGRVALKNGERLGKYLLINHPPGMDGVESFGTVDSLDDFRVSYESNKTIVWGQGSTGTVPSDAICLPVCSLTGGRCTKINRVGVCVCFVGWKGEACSEAVSTTSSSNIVTIVAAVVAVCGTVILGAVCAAFFAVRYARKMASRVQPLAPAADPALDLDGPIAKAMKVIENIRHNRLKGEALTAELKIVEDALIANNMYQPELEPITADHNIGLETVQFLDNLLMTRLMPDKKMRGRGRRTSAFKDQSMASVSVTVSNGGSMSGDRGRGDGTHEATEVSAALEHINRWDFNMFDLETATMGHPLCALTFEVMFKLGLFESFAIDPTQMKRFLLALESGYMNHNAVYHTSTHAADVLQAMFVFFQNGLFKNLFSPQEMLAACLACVAHDLDHPGVTNSFLISTSHDLSLLYNDTAVLENHHSATFFKVLQDPDANILRMLDTTDFRIIRKMICSLILSTDVAQHFEHLAKFKTRVNSGLISLDDDADRLLLLIMAIKCADVSNPTKPKPIYDGWTARIMEEFYRQGDRERELGMPISMFMDRLNPCVAKCQNGFIEVIVSPLFKSFTDFVGFEEPYINVIRNHKYWKRYLEGSVSSEAVLADSHSTPITRASRHKSVGSMDRL* # ORIGINAL: g11540.t1 original gene structure, not modified by PASA NODE_248_length_29299_cov_41.9291 AUGUSTUS gene 320 2368 . - . ID=g11540;Name=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS mRNA 320 2368 . - . ID=g11540.t1;Parent=g11540;Name=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 1092 2368 . - . ID=g11540.t1.exon1;Parent=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 1092 2368 . - 0 ID=cds.g11540.t1;Parent=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 735 828 . - . ID=g11540.t1.exon2;Parent=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 735 828 . - 1 ID=cds.g11540.t1;Parent=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 320 408 . - . ID=g11540.t1.exon3;Parent=g11540.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 320 408 . - 0 ID=cds.g11540.t1;Parent=g11540.t1 #PROT g11540.t1 g11540 MATVSTRGGVDGGASESLSCAHTPAASPASSVPLQSTQTTQTTQTAPGKPAEVCTFSLNCRCGLSRKDHLVRQFEGYSAFMSARLSLQSKLGPQPPHLEGSVPATAIMQQQAVSVAAPAQQSIGKAAWPAIEHFLTSTYGVQKFCIVCGTENGRATAVGTTATPTATQAANSAANAASPTTNTGDDTAVAASAAVSSVAPVTGVSASPVCSRCQTLIENDDSIFTATLRAGGNPGGVNALLGASNAGAPTTAGCVGGSPAPGVVSSTPPSVSSGTRLPLSQMQLARPSTVRDAIAAGAYSRPDGKDDEAMLSGDAASSVGMDAYEDGEGPDYYPQPFVYRAEGGVSGQQSASNASQQQSQPAPRMPSPLAMYAGADETPSEDHRLHLAWMLFRDVLRSVYRSRSPQELDNAAWLLSKAETAAIVGRLSSRDSAGLLRRLELETRDWLIELRARLVDQLWRQSGSSRARDFILSLMNSYAECNAKAA # ORIGINAL: g11543.t1 original gene structure, not modified by PASA NODE_248_length_29299_cov_41.9291 AUGUSTUS gene 12673 16599 . + . ID=g11543;Name=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS mRNA 12673 16599 . + . ID=g11543.t1;Parent=g11543;Name=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 12673 12819 . + . ID=g11543.t1.exon1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 12673 12819 . + 0 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 13254 13433 . + . ID=g11543.t1.exon2;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 13254 13433 . + 0 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 13728 13906 . + . ID=g11543.t1.exon3;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 13728 13906 . + 0 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 14151 14402 . + . ID=g11543.t1.exon4;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 14151 14402 . + 1 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 14819 14906 . + . ID=g11543.t1.exon5;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 14819 14906 . + 1 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 15530 15636 . + . ID=g11543.t1.exon6;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 15530 15636 . + 0 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 15993 16113 . + . ID=g11543.t1.exon7;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 15993 16113 . + 1 ID=cds.g11543.t1;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS exon 16501 16599 . + . ID=g11543.t1.exon8;Parent=g11543.t1 NODE_248_length_29299_cov_41.9291 AUGUSTUS CDS 16501 16599 . + 0 ID=cds.g11543.t1;Parent=g11543.t1 #PROT g11543.t1 g11543 MDALASFDWSLLRPSTEGAVFVLAFYAIFAAGVAIMPGQIVQGWFKDPKGKTLQYKLNGFRVGAAVIAGCIALVHYGVLPGSFIYNEIRSIIIVSNVLAFVFAAVLLIKGRLRGESAHNGNTGLDYVEGCELNPRFGRMFDLKMFFPKAGCALLLLVVLSLAHEHAARRGALGEAVASTPSYFGLSAAMAAHVLCNSWFVFDYLYNERVQLYTYDVKAEHLGWKLVWGQMVFYPFVYSMHAWFTLDPSAENVRYLDANPHIALACVGLYAVAYCIFRGANNQKYLFKTNPSASFLGIFKPKSVANGRLLCSGFWGAARHFNYFGEILAAIALTLPCGFGHVWPWLYPAYMTALLIPREMSDNAICRKQYGEKVWQEYTSAVPYRIIPFIY* # PASA_UPDATE: g11541.t1, single gene model update, valid-1, status:[pasa:asmbl_4415,status:12], valid-1 NODE_248_length_29299_cov_41.9291 . gene 3343 5862 . + . ID=g11541;Name=g11541.t1 NODE_248_length_29299_cov_41.9291 . mRNA 3343 5862 . + . ID=g11541.t1;Parent=g11541;Name=g11541.t1 NODE_248_length_29299_cov_41.9291 . five_prime_UTR 3343 3481 . + . ID=g11541.t1.utr5p1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 3343 3637 . + . ID=g11541.t1.exon1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 3482 3637 . + 0 ID=cds.g11541.t1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 4410 4513 . + . ID=g11541.t1.exon2;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 4410 4513 . + 0 ID=cds.g11541.t1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 4691 4798 . + . ID=g11541.t1.exon3;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 4691 4798 . + 1 ID=cds.g11541.t1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 5088 5195 . + . ID=g11541.t1.exon4;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 5088 5195 . + 1 ID=cds.g11541.t1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 5391 5513 . + . ID=g11541.t1.exon5;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 5391 5513 . + 1 ID=cds.g11541.t1;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . exon 5856 5862 . + . ID=g11541.t1.exon6;Parent=g11541.t1 NODE_248_length_29299_cov_41.9291 . CDS 5856 5862 . + 1 ID=cds.g11541.t1;Parent=g11541.t1 #PROT g11541.t1 g11541 MSLFIGRLAQSTRVSDLEPIFAKYGKITRCDVKSGHNHSFGFVEYDDKRDAEDALRKENGRDLLGARLAIEWARGPGRKAESDDCFRCGKSGHWARDCTGGGRDRDGGRDGGRDGGRDRRRSRSPPRRRSRSRSPARDRSRSPRRRSTRRSPSPDARRKSPSPRRARSPSPAPRRARSPSPAPRRERSPSPRRADDEPARD* # PASA_UPDATE: g11545.t1, single gene model update, valid-1, status:[pasa:asmbl_4418,status:12], valid-1 NODE_248_length_29299_cov_41.9291 . gene 23673 29173 . + . ID=g11545;Name=g11545.t1 NODE_248_length_29299_cov_41.9291 . mRNA 23673 29173 . + . ID=g11545.t1;Parent=g11545;Name=g11545.t1 NODE_248_length_29299_cov_41.9291 . five_prime_UTR 23673 23820 . + . ID=g11545.t1.utr5p1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 23673 23949 . + . ID=g11545.t1.exon1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 23821 23949 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 24221 24794 . + . ID=g11545.t1.exon2;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 24221 24794 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 24960 25007 . + . ID=g11545.t1.exon3;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 24960 25007 . + 2 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 25166 26223 . + . ID=g11545.t1.exon4;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 25166 26223 . + 2 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 26420 26821 . + . ID=g11545.t1.exon5;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 26420 26821 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 26988 27067 . + . ID=g11545.t1.exon6;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 26988 27067 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 27301 27445 . + . ID=g11545.t1.exon7;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 27301 27445 . + 1 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 27710 27790 . + . ID=g11545.t1.exon8;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 27710 27790 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 28070 28190 . + . ID=g11545.t1.exon9;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 28070 28190 . + 0 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 28538 29021 . + . ID=g11545.t1.exon10;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 28538 29021 . + 2 ID=cds.g11545.t1;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . exon 29134 29173 . + . ID=g11545.t1.exon11;Parent=g11545.t1 NODE_248_length_29299_cov_41.9291 . CDS 29134 29173 . + 1 ID=cds.g11545.t1;Parent=g11545.t1 #PROT g11545.t1 g11545 MAYTVGDICLCSFEFEPQEDDELHVLPGDELLLIEVVDEEWVVAQKLTDASAAGLVAVDFIKPTGRRGAQKPPTHTPTPIPTPTPTPTPTPIAAPAGIPAEEDHITPAEEPLYGNIASVRRESAAVVPQQLQAPAQVDQNVTHHVTSAEEPLYGNIASVRRESAAVMSQQLQAPAHVDQTVTHGNEEPGHMDVHSTVAAEEIQCTESSQSLDVTLEASTSTSEPAAATAFDQKYEELSQNFHIERTLPAADANEWTSERVAQWMNESGLAEFSAAFLSHSVDGRSLLNATDATSLAAYGITAAHDVARILGAISVLGRVVNRRSRLFSAGKSYGTASANTVTESVSEVHTNAANEAPLTGEENGIGHTIAEEGEGHNGGDDVEVTAEESGDGQAAFTEESEDFTSDSSDDDDNDDEDDENDVDENGDVDEAATEAASGVESGDHAHGHVIETDLDAGEPSDEQRAELIGSAEDICIATEEEDCEVDGAADESEVVDENTDDGVVVEEGNGDDDARVPCADDPRDTEEEEAESPDHGVTEDAALDDSGTDATGDIDIGADRESEVATGEVEKEATVDPVVDVPPQEAPKKAVKGPPGLAMAFAVKPPPAPIDSSTQQHSTPTPTPTPTTATATVLPHQTSATEMPTIIPRTRSNPAPVPSVVAAPVTPVTTVVRPPVIAPVVPPVIAVTPPVIAVTAPATASTADSSSVVPRPSVVGTPSGGRPPSGGATKSSFMPVRSSIPQQQIDKARSQNSKLPRNVIKGLNLSLSPAELKYPVMSGWLWKQGGSGLGKNWKRRWFVLQDFCLYYFKSQTEMTALGMITIPSYRIARVTESDGIKKPFAFRATHDCMTPYYFHADDHQMMVRWMENLALASVLELPMGYKGDPAKAKPATQSSFRHHRQPSGSHILGTSQSAPALGQPLLSPAAAHHVPQPQSSPADQAPQPQPQQPQQLQQQQSPGGSALHAQQNTVTVQPSSAPQSASQSPQVSRGPSLAQLAFASKPPTTGGTIPGSAIPGATGAPPPKPPRASAGDRRSNVGRMKHLSTHPLIRSST* # ORIGINAL: g7088.t1 original gene structure, not modified by PASA NODE_3308_length_3780_cov_40.5113 AUGUSTUS gene 1957 2884 . + . ID=g7088;Name=g7088.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS mRNA 1957 2884 . + . ID=g7088.t1;Parent=g7088;Name=g7088.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS exon 1957 2306 . + . ID=g7088.t1.exon1;Parent=g7088.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS CDS 1957 2306 . + 0 ID=cds.g7088.t1;Parent=g7088.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS exon 2413 2884 . + . ID=g7088.t1.exon2;Parent=g7088.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS CDS 2413 2884 . + 1 ID=cds.g7088.t1;Parent=g7088.t1 #PROT g7088.t1 g7088 MAEVEKGRKRPLEGPPDAVEKKLSKVARASHRKADAAANDPAPPPCPLCTTLAENAESVGGGDSSAPACAFYSTQFKKDYHRCPVCELIFVHPRHHVTADREKARYEQHNNSPLDDKYREFLSAAVVQVEKLAPTCARGLDYGCGPNPTLSVMLREKGYASVVDYDPYFRPDAIDGDSCHGFDFITCTEAAEHFRRPRDDFVRMFGLLKRPGGVCVVMTQLVYTDAQFDNWWYLRDITHVSFYSPETMRFIGELHSLDVTESAPNVVVFTARA* # ORIGINAL: g7087.t1 original gene structure, not modified by PASA NODE_3308_length_3780_cov_40.5113 AUGUSTUS gene 146 789 . + . ID=g7087;Name=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS mRNA 146 789 . + . ID=g7087.t1;Parent=g7087;Name=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS exon 146 229 . + . ID=g7087.t1.exon1;Parent=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS CDS 146 229 . + 1 ID=cds.g7087.t1;Parent=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS exon 406 489 . + . ID=g7087.t1.exon2;Parent=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS CDS 406 489 . + 1 ID=cds.g7087.t1;Parent=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS exon 696 789 . + . ID=g7087.t1.exon3;Parent=g7087.t1 NODE_3308_length_3780_cov_40.5113 AUGUSTUS CDS 696 789 . + 1 ID=cds.g7087.t1;Parent=g7087.t1 #PROT g7087.t1 g7087 VSGNKASTEAWIEFADALRTNKTLKSVLLDFNRIEKSAAAKFAEVVAENTALERLDLDGNRIGEEGAQAILNALLANERSSLRQLT* # ORIGINAL: g7851.t1 original gene structure, not modified by PASA NODE_1939_length_8443_cov_35.9644 AUGUSTUS gene 376 1372 . - . ID=g7851;Name=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS mRNA 376 1372 . - . ID=g7851.t1;Parent=g7851;Name=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 1363 1372 . - . ID=g7851.t1.exon1;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 1363 1372 . - 0 ID=cds.g7851.t1;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 1002 1099 . - . ID=g7851.t1.exon2;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 1002 1099 . - 2 ID=cds.g7851.t1;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 705 803 . - . ID=g7851.t1.exon3;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 705 803 . - 0 ID=cds.g7851.t1;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 376 471 . - . ID=g7851.t1.exon4;Parent=g7851.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 376 471 . - 0 ID=cds.g7851.t1;Parent=g7851.t1 #PROT g7851.t1 g7851 MLSELNEWVEQGTVLSCKDVVAAMLDKTKLLGHEQQDAHELFQFITARMNDEVVRATLTRSLADAMHAEAGLDTLRRWGSSRHPFQGMLSARLTCQKCHSS # PASA_UPDATE: g7854.t1, single gene model update, valid-1, status:[pasa:asmbl_3059,status:12], valid-1 NODE_1939_length_8443_cov_35.9644 . gene 5380 8240 . + . ID=g7854;Name=g7854.t1 NODE_1939_length_8443_cov_35.9644 . mRNA 5380 8240 . + . ID=g7854.t1;Parent=g7854;Name=g7854.t1 NODE_1939_length_8443_cov_35.9644 . five_prime_UTR 5380 5429 . + . ID=g7854.t1.utr5p1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 5380 5483 . + . ID=g7854.t1.exon1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 5430 5483 . + 0 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 5670 5838 . + . ID=g7854.t1.exon2;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 5670 5838 . + 0 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 6194 6293 . + . ID=g7854.t1.exon3;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 6194 6293 . + 2 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 6884 7013 . + . ID=g7854.t1.exon4;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 6884 7013 . + 1 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 7329 7442 . + . ID=g7854.t1.exon5;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 7329 7442 . + 0 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 7751 7840 . + . ID=g7854.t1.exon6;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 7751 7840 . + 0 ID=cds.g7854.t1;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . exon 8049 8240 . + . ID=g7854.t1.exon7;Parent=g7854.t1 NODE_1939_length_8443_cov_35.9644 . CDS 8049 8240 . + 0 ID=cds.g7854.t1;Parent=g7854.t1 #PROT g7854.t1 g7854 MLAASVLRASRAGAQRGAMGALFQPMGIQVRNLNLHEYQSKELMEKHGVTTQRFKVANTPGEALGAAKWVMNDIKAKEIVLKAQIHAGGRGKGTFSSGLQGGVKLTKDPKEVEQLASRMLGYKLTTKQTSADGVEVKKLMVAEALDITSEKYFAIVLDRAMGGPVLVASNEGGVDIEEVAHKSPEKIFKEPVDIMTGVKDEQAKRLAEKLNFKGDFAVQAADQIKKLYNLFVAVDATQVEINPFGSAHDGRSEYKIQPSIHLSSLFPSFPLSPVIHRGFYVV* # ORIGINAL: g7852.t1 original gene structure, not modified by PASA NODE_1939_length_8443_cov_35.9644 AUGUSTUS gene 1814 2279 . - . ID=g7852;Name=g7852.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS mRNA 1814 2279 . - . ID=g7852.t1;Parent=g7852;Name=g7852.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 2135 2279 . - . ID=g7852.t1.exon1;Parent=g7852.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 2135 2279 . - 0 ID=cds.g7852.t1;Parent=g7852.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 1814 1932 . - . ID=g7852.t1.exon2;Parent=g7852.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 1814 1932 . - 2 ID=cds.g7852.t1;Parent=g7852.t1 #PROT g7852.t1 g7852 MDDVRLVAAAFAGAAVAVLGFVVAARGDATQDGGSSGSGSIVRKKVRKGRSGYVPGLRNDGNTCFMNSILQVRALLWFATYRHGCLY* # ORIGINAL: g7853.t1 original gene structure, not modified by PASA NODE_1939_length_8443_cov_35.9644 AUGUSTUS gene 2865 4549 . + . ID=g7853;Name=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS mRNA 2865 4549 . + . ID=g7853.t1;Parent=g7853;Name=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 2865 2977 . + . ID=g7853.t1.exon1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 2865 2977 . + 0 ID=cds.g7853.t1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 3160 3253 . + . ID=g7853.t1.exon2;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 3160 3253 . + 1 ID=cds.g7853.t1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 3555 3680 . + . ID=g7853.t1.exon3;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 3555 3680 . + 0 ID=cds.g7853.t1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 3922 4040 . + . ID=g7853.t1.exon4;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 3922 4040 . + 0 ID=cds.g7853.t1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 4205 4371 . + . ID=g7853.t1.exon5;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 4205 4371 . + 1 ID=cds.g7853.t1;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS exon 4491 4549 . + . ID=g7853.t1.exon6;Parent=g7853.t1 NODE_1939_length_8443_cov_35.9644 AUGUSTUS CDS 4491 4549 . + 2 ID=cds.g7853.t1;Parent=g7853.t1 #PROT g7853.t1 g7853 MNGKLAPSQSTVYVSNLPFSLTNNDIHAIFEKYGEVAKVTVVKDKDSRLSKGVAFVLFKDRESALKATEAMNATAVMDRTIKCSIAVDNGRASEFIRKKTYSDKSRCYECGEEGHLSYKCPKNLLGEREQPVKKEKEKKKRRMDGPPRPRPPLKRAGSEEYDGDAPDDEAALMDAAAPAWGSDRTEALQSLLSQQQYHARAPSTTAGGARGPKRKGYFSDEEGSD* # PASA_UPDATE: g3442.t1, single gene model update, valid-1, status:[pasa:asmbl_6687,status:12], valid-1 NODE_3894_length_2558_cov_32.1579 . gene 603 2455 . - . ID=g3442;Name=g3442.t1 NODE_3894_length_2558_cov_32.1579 . mRNA 603 2455 . - . ID=g3442.t1;Parent=g3442;Name=g3442.t1 NODE_3894_length_2558_cov_32.1579 . five_prime_UTR 2396 2455 . - . ID=g3442.t1.utr5p1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . exon 2288 2455 . - . ID=g3442.t1.exon1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . CDS 2288 2395 . - 0 ID=cds.g3442.t1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . exon 1985 2130 . - . ID=g3442.t1.exon2;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . CDS 1985 2130 . - 0 ID=cds.g3442.t1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . exon 1552 1649 . - . ID=g3442.t1.exon3;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . CDS 1552 1649 . - 1 ID=cds.g3442.t1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . exon 1186 1375 . - . ID=g3442.t1.exon4;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . CDS 1186 1375 . - 2 ID=cds.g3442.t1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . exon 603 1002 . - . ID=g3442.t1.exon5;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . CDS 885 1002 . - 1 ID=cds.g3442.t1;Parent=g3442.t1 NODE_3894_length_2558_cov_32.1579 . three_prime_UTR 603 884 . - . ID=g3442.t1.utr3p1;Parent=g3442.t1 #PROT g3442.t1 g3442 MDALKAAHVTAGELSLLQIGCEVGGVAFELSRHFAQVVAVDYVGRFIEAALTMQRSQRMSFDVTMEGDARKTVVFERAADVRHDRVTFKQLTWLPVEIGLHDVVVITHFLTRASNPKAWVLRMKEVLRPGGFGVVICDPWPSVDNSNGIDTQAYPPQSKWLAGHNHTHTTADTITSLLGEGFSLVSQSKFPYASRDGSRGVRLLAADALVYRKRQMPAN* # PASA_UPDATE: g3463.t1, single gene model update, valid-1, status:[pasa:asmbl_9378,status:3], valid-1 NODE_789_length_17684_cov_41.468 . gene 9766 13627 . - . ID=g3463;Name=g3463.t1 NODE_789_length_17684_cov_41.468 . mRNA 9766 13627 . - . ID=g3463.t1;Parent=g3463;Name=g3463.t1 NODE_789_length_17684_cov_41.468 . five_prime_UTR 13531 13627 . - . ID=g3463.t1.utr5p1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 13453 13627 . - . ID=g3463.t1.exon1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 13453 13530 . - 0 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 12978 13199 . - . ID=g3463.t1.exon2;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 12978 13199 . - 0 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 12605 12719 . - . ID=g3463.t1.exon3;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 12605 12719 . - 0 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 12200 12319 . - . ID=g3463.t1.exon4;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 12200 12319 . - 2 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 11886 11984 . - . ID=g3463.t1.exon5;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 11886 11984 . - 2 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 11548 11605 . - . ID=g3463.t1.exon6;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 11548 11605 . - 2 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 11164 11207 . - . ID=g3463.t1.exon7;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 11164 11207 . - 1 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 10851 10937 . - . ID=g3463.t1.exon8;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 10851 10937 . - 2 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . exon 9766 10652 . - . ID=g3463.t1.exon9;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . CDS 9991 10652 . - 2 ID=cds.g3463.t1;Parent=g3463.t1 NODE_789_length_17684_cov_41.468 . three_prime_UTR 9766 9990 . - . ID=g3463.t1.utr3p1;Parent=g3463.t1 #PROT g3463.t1 g3463 MKTQAIAPFKWRYAVFISFVAVLHCQGVSVNSHSIKLEISQIWLYSFSTVNCPSPCVSTTVIAQWRNGTQTSVGVKYFDDWYSTTASQFDVNFSDEDGYPTFLFTSVNKASMQIFTLPSNSTDVPDDGRSKPASIKLTNNVNSNSLKLIVTVTCQSNRKGRNCDECTSVNRWGPLCDKQCACTMGVCSNGPRGNGDCMSCLSTDVFGPLCNNTCTCQNGNCSAGITGTGKCTDPCPARTYGPNCMACACPSTSICNTNTGACTCPPNKYGANCTETGNSLAEGSAASNTKGGSASVGPIVGGVIGAIVCVGAVAGLLVWHRRRAGGGDGVGLTSAASWKNKSVFSTSKLSKGLGGADDAEAAQGELFHNPMRQNSADALISDRKPASRDHEMSALSDTADRKSHVPAGYATLQAARAYDSPISRKKTDEVLYDKSYAQVRRPAHADGGLNYADVAVGSTNDDEGGYERPVRHKLSGEDDAVDYTLVRAGKKGSV* # PASA_UPDATE: g3461.t1, single gene model update, valid-1, status:[pasa:asmbl_9377,status:12], valid-1 NODE_789_length_17684_cov_41.468 . gene 2 5217 . - . ID=g3461;Name=g3461.t1 NODE_789_length_17684_cov_41.468 . mRNA 2 5217 . - . ID=g3461.t1;Parent=g3461;Name=g3461.t1 NODE_789_length_17684_cov_41.468 . five_prime_UTR 5126 5217 . - . ID=g3461.t1.utr5p1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 5052 5217 . - . ID=g3461.t1.exon1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 5052 5125 . - 0 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 4774 4871 . - . ID=g3461.t1.exon2;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 4774 4871 . - 1 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 4425 4502 . - . ID=g3461.t1.exon3;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 4425 4502 . - 2 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 3993 4081 . - . ID=g3461.t1.exon4;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 3993 4081 . - 2 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 3414 3568 . - . ID=g3461.t1.exon5;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 3414 3568 . - 0 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 2997 3111 . - . ID=g3461.t1.exon6;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 2997 3111 . - 1 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 2428 2546 . - . ID=g3461.t1.exon7;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 2428 2546 . - 0 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 1690 1786 . - . ID=g3461.t1.exon8;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 1690 1786 . - 1 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 1354 1437 . - . ID=g3461.t1.exon9;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 1354 1437 . - 0 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 1060 1174 . - . ID=g3461.t1.exon10;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 1060 1174 . - 0 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 519 679 . - . ID=g3461.t1.exon11;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 519 679 . - 2 ID=cds.g3461.t1;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . exon 2 80 . - . ID=g3461.t1.exon12;Parent=g3461.t1 NODE_789_length_17684_cov_41.468 . CDS 2 80 . - 0 ID=cds.g3461.t1;Parent=g3461.t1;3_prime_partial=true #PROT g3461.t1 g3461 MADGASDVGIPPTMQQIIKDDYTFAKEAQDELKRWGFLEWGFDYNVVSILGCQSSGKSTLLNLLFGTHFPEMDSDIGRQQTTKGLWISRCEAFRALVMDVEGTDSKERGEQHVNFERKSALFSLALSEVLLINMWAADVGRYTASNYGLLKTVFDIHLQLFQQENAPKTLLVFVLRDHTTTPIERLADILRNDMDTIWQDLSKPDRFVNSRIADFFDLDFVSLPHKELQTDKFFSSVASFKDRFINKSAEDYFFQERYHKRIPADGFFTYAGGIWDTIINNKDVDIPTQKEMLANYRCDEIAEEVFGLFEDGAASVLVEADSPEIVADFGAKVHVYIRTSLAAYDKDASRYHKMVAGRKRETLLTRMVTHAKPSFDTQIDNIARVATAKFGEILADKLNVRTVDIGRDFALLASSALISAE # PASA_UPDATE: g3462.t1, single gene model update, valid-1, status:[pasa:asmbl_9379,status:12],[pasa:asmbl_9381,status:12], valid-1 NODE_789_length_17684_cov_41.468 . gene 5658 9349 . - . ID=g3462;Name=g3462.t1 NODE_789_length_17684_cov_41.468 . mRNA 5658 9349 . - . ID=g3462.t1;Parent=g3462;Name=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 9254 9349 . - . ID=g3462.t1.exon1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 9254 9349 . - 0 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 8945 9093 . - . ID=g3462.t1.exon2;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 8945 9093 . - 0 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 8694 8754 . - . ID=g3462.t1.exon3;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 8694 8754 . - 1 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 7913 8333 . - . ID=g3462.t1.exon4;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 7913 8333 . - 0 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 7306 7538 . - . ID=g3462.t1.exon5;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 7306 7538 . - 2 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . exon 5658 7104 . - . ID=g3462.t1.exon6;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . CDS 5782 7104 . - 0 ID=cds.g3462.t1;Parent=g3462.t1 NODE_789_length_17684_cov_41.468 . three_prime_UTR 5658 5781 . - . ID=g3462.t1.utr3p1;Parent=g3462.t1 #PROT g3462.t1 g3462 MNNALQKIYRELREIDRKSVYDNEAMLVFREEDPLHITVTICLKEGPYRDASIGFDMKLPNDYPDSRATVKCRDKVFHPNISAGNGSVCLNILSSDWNNSIKVETYINCIMWLLRNPNFSSRLNSDCIENTFDDEVRGSLLGETIKGVKYDVLVNPKVSWDAFYLIVRRKAPSADAKYALSADAETGPGVRPKQGTFALLRDMFDEEDGTACIGTDPIKELALSDPFLKKLACASNAGIFDMKTARRDGTLFRAYHSGMPHKCTIKEVVVDVIVKGSGGEEEGEKPAQTVIVVLCGDEEISMDALATYLGADACVKTEDWKVMHVDRGWARSLAMPVSQEATATATTTATAETNAPIADAETKVLHIIASPTLFTRIQAGDKVMFPMTGRERRLFVTDMSHYVELVGLSEDGSPFNADADFVKQGDEYAKFVARILEKEAKRVAEMNKQKELQGTKAERTAARCARRAAAAVGAAAALATETVNVTATETVNATETVNATATETVNATTTETVNATTTETVNATETVNVTATETVNATATETVNATETVNVTATETVNATTTVTAETPTPSGTIAVPAAHNVLPDTIAIPSIAAFLFGNNVRASAVGTAAMGAVVEEETERDQAVMTTGSAPDAATVNAPEQAEREHGGIELSVHRGRVDCSMHTAGRAEMLGLPSTDKTALAATLVAHLSASASLSSIDSDSASNSSGEFVEPDAVEEPVSTASDEEDQLVPPIQMIANFINARIQDIQALTMRNVPVV* # ORIGINAL: g3464.t1 original gene structure, not modified by PASA NODE_789_length_17684_cov_41.468 AUGUSTUS gene 14282 17653 . + . ID=g3464;Name=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS mRNA 14282 17653 . + . ID=g3464.t1;Parent=g3464;Name=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS exon 14282 16838 . + . ID=g3464.t1.exon1;Parent=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS CDS 14282 16838 . + 0 ID=cds.g3464.t1;Parent=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS exon 17202 17365 . + . ID=g3464.t1.exon2;Parent=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS CDS 17202 17365 . + 2 ID=cds.g3464.t1;Parent=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS exon 17612 17653 . + . ID=g3464.t1.exon3;Parent=g3464.t1 NODE_789_length_17684_cov_41.468 AUGUSTUS CDS 17612 17653 . + 0 ID=cds.g3464.t1;Parent=g3464.t1 #PROT g3464.t1 g3464 MAAIYARRPCRLHIVVVTAVIVALLSSGPCALAGSVAYVASAADGGADGAGRGTNGTPLATLAAAVALLDADNTYDSISLSNGTYAANQLAITRSMSISGRSEGSVIVTCAAGGPGWIVSGTAVVVVLNLTFSGCPQSAMRLRNTGNVTASHCAFVFNKGTDGGAVSAVDNSTFMCTGCTFRGNAAESGGGISAAQFAQISVEGCAFENNTASDYGGAISLDDSAQLVGSSIALLSNVALGSGGAIAMRFKSKAVLSASIMGNNQATVEGGAATVANDAIFWLVGGSTCVRNKALRFGGCIYANDAAAVRVDNSTLDWNFARESGGGIYALSTSAIRLTKMSATNNSVDLRGGGFIFVQDRVTVEIVDSLLSWSSCGDYGGAVSALDDVVLNITRSQIVYNRANYYGGGVHVENQCKVSITESNIDYNAAVEVGGGLDVWGVSFLHMSHSTCSYNSGRKYYAGCLHMYTNARAIVDNCTLIGNRGYNYASAIAMDDNTTVTITRSTIGFGRASAEKGANGGAAISPWVTATLRIVDCLFLSNESPYGGALALWDDTNTHVEGTTFVNNTSTDVDGGGALYIFRSARLTVWSSLFINNTASLIGGAMSQLDTTEVSIADSMFVENKAGDAVQGGGGAIHFNPDKLKNANDVTASLRVVNSTFRGNVAFIGSAIYTTNPARTPKIGEKIVNCTFENNRLINGETTAYLATPQASIQISSSLPAPLTIISGDQLPSFSVVALDGYNTATAGSPLSILVLQLTLRNISRQDRLFIIQGETEKAVLKSTVRFTSARVLAPPGAYDLYVDSTSPQFSTYNLSQSFRVVVNTCPSGYFEDVERVDGVAYPVCQKVIATNEIPVVAVAASIPTVFVVVVIIFVLLYRHKKALLEKEARSYEVDFDELSFEAQIGQGSFGKVYLVGSTA* # PASA_UPDATE: g12003.t1, single gene model update, valid-1, status:[pasa:asmbl_5961,status:3], valid-1 NODE_3382_length_3582_cov_37.1089 . gene 305 1584 . + . ID=g12003;Name=g12003.t1 NODE_3382_length_3582_cov_37.1089 . mRNA 305 1584 . + . ID=g12003.t1;Parent=g12003;Name=g12003.t1 NODE_3382_length_3582_cov_37.1089 . five_prime_UTR 305 384 . + . ID=g12003.t1.utr5p1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . exon 305 468 . + . ID=g12003.t1.exon1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . CDS 385 468 . + 0 ID=cds.g12003.t1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . exon 674 760 . + . ID=g12003.t1.exon2;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . CDS 674 760 . + 0 ID=cds.g12003.t1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . exon 1107 1216 . + . ID=g12003.t1.exon3;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . CDS 1107 1216 . + 0 ID=cds.g12003.t1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . exon 1411 1584 . + . ID=g12003.t1.exon4;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . CDS 1411 1492 . + 1 ID=cds.g12003.t1;Parent=g12003.t1 NODE_3382_length_3582_cov_37.1089 . three_prime_UTR 1493 1584 . + . ID=g12003.t1.utr3p1;Parent=g12003.t1 #PROT g12003.t1 g12003 MGPRIVFLGLGAVSMSAYYYHHKIHDHASGPSPFAPLERLRPQSDVNLVQEAGKLITESSVSKSVNSTTTELKSRWNDGVRWLYGCLIDSSHLRDGIAVPVDSGAAALNKIRSSLSSGDK* # PASA_UPDATE: g12004.t1, single gene model update, valid-1, status:[pasa:asmbl_5962,status:12], valid-1 NODE_3382_length_3582_cov_37.1089 . gene 2178 3434 . - . ID=g12004;Name=g12004.t1 NODE_3382_length_3582_cov_37.1089 . mRNA 2178 3434 . - . ID=g12004.t1;Parent=g12004;Name=g12004.t1 NODE_3382_length_3582_cov_37.1089 . five_prime_UTR 3396 3434 . - . ID=g12004.t1.utr5p1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . exon 3340 3434 . - . ID=g12004.t1.exon1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . CDS 3340 3395 . - 0 ID=cds.g12004.t1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . exon 2956 3038 . - . ID=g12004.t1.exon2;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . CDS 2956 3038 . - 1 ID=cds.g12004.t1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . exon 2597 2673 . - . ID=g12004.t1.exon3;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . CDS 2597 2673 . - 2 ID=cds.g12004.t1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . exon 2178 2388 . - . ID=g12004.t1.exon4;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . CDS 2311 2388 . - 0 ID=cds.g12004.t1;Parent=g12004.t1 NODE_3382_length_3582_cov_37.1089 . three_prime_UTR 2178 2310 . - . ID=g12004.t1.utr3p1;Parent=g12004.t1 #PROT g12004.t1 g12004 MRGASLALVHSLMKHCWPRVRHHAPELVFGIVALALDVAPERESSDDKRALWNRSIDALKMVRECCGEDALRPLVAELGDGVDTLPHLRDVLEAWGV* # ORIGINAL: g11410.t1 original gene structure, not modified by PASA NODE_884_length_16290_cov_27.9625 AUGUSTUS gene 1473 2060 . - . ID=g11410;Name=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS mRNA 1473 2060 . - . ID=g11410.t1;Parent=g11410;Name=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 1957 2060 . - . ID=g11410.t1.exon1;Parent=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 1957 2060 . - 0 ID=cds.g11410.t1;Parent=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 1720 1882 . - . ID=g11410.t1.exon2;Parent=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 1720 1882 . - 1 ID=cds.g11410.t1;Parent=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 1473 1649 . - . ID=g11410.t1.exon3;Parent=g11410.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 1473 1649 . - 0 ID=cds.g11410.t1;Parent=g11410.t1 #PROT g11410.t1 g11410 MSRNLRALFDKLVSRAPGAVAAAPVDGMMPVDAGRFQSLMVDVDSPIKVFAERNGLVFRAGKGFYEFTKPEHISMEKEIVLQDRVTGDMFTGDAARAILGITDATSAAKKKIKPGDYDTFRIYVQSTSYNRKLVAGTHFLYEVDTDK* # ORIGINAL: g11411.t1 original gene structure, not modified by PASA NODE_884_length_16290_cov_27.9625 AUGUSTUS gene 2957 13550 . + . ID=g11411;Name=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS mRNA 2957 13550 . + . ID=g11411.t1;Parent=g11411;Name=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 2957 3046 . + . ID=g11411.t1.exon1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 2957 3046 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 3284 3520 . + . ID=g11411.t1.exon2;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 3284 3520 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 3906 5637 . + . ID=g11411.t1.exon3;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 3906 5637 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 5830 5880 . + . ID=g11411.t1.exon4;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 5830 5880 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 6147 6503 . + . ID=g11411.t1.exon5;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 6147 6503 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 6774 6869 . + . ID=g11411.t1.exon6;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 6774 6869 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 7186 7392 . + . ID=g11411.t1.exon7;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 7186 7392 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 7741 7884 . + . ID=g11411.t1.exon8;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 7741 7884 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 8178 8285 . + . ID=g11411.t1.exon9;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 8178 8285 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 8749 8883 . + . ID=g11411.t1.exon10;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 8749 8883 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 9202 9254 . + . ID=g11411.t1.exon11;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 9202 9254 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 9939 10028 . + . ID=g11411.t1.exon12;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 9939 10028 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 10747 11080 . + . ID=g11411.t1.exon13;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 10747 11080 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 11322 11499 . + . ID=g11411.t1.exon14;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 11322 11499 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 11659 11866 . + . ID=g11411.t1.exon15;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 11659 11866 . + 1 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 12132 12232 . + . ID=g11411.t1.exon16;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 12132 12232 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 12826 12884 . + . ID=g11411.t1.exon17;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 12826 12884 . + 1 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 13017 13084 . + . ID=g11411.t1.exon18;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 13017 13084 . + 2 ID=cds.g11411.t1;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS exon 13338 13550 . + . ID=g11411.t1.exon19;Parent=g11411.t1 NODE_884_length_16290_cov_27.9625 AUGUSTUS CDS 13338 13550 . + 0 ID=cds.g11411.t1;Parent=g11411.t1 #PROT g11411.t1 g11411 MTRANGPGCWRCPAGSALMLAVILVSLSSTDAQRGSLTVKLEQASISSNDCDDGTFTYSACDPYFSIVIENVGTTSTCTASSSSYISKPGNPFDASKFKCAATIPTNWGNSMKLTVSAKDHDTYSDDNIGSGSGTFDISKGTTGRITFGSSWADFTVTMTCIVPYYVPSTTCSTYCLASSTCNGHGTCTTSGTCSCTGNYAGTTCNECQTNYYGASCTQCPASCGTTVPSCVDKIGGSGNCLSCPQIPGDAYGPTCSNQCKCANVFVCNRGINGDGTCTACPVGFYGSKCLSACNCNGGTCSEGPTGNGACLSCPTGKYGTDCQNTCSCNGGTCVDGPTGTGVCLTCTTGRYGSTCQNLCVCNGGTCIAGVSSACDSCPVGKLGANCQNTCPCNGGTCVDGPAGSGVCLTCPSGHYGPSCAGVCNCNGGTCADGLMGTGTCINCPLGRWGSNCQNICNCYGGVCADGPDGNGACTSCPAGRYGPSCALTCLCNGGVCNEGPAGDGTCTSCPVNKYGLNCGSLCTCNGGTCQDGPSGTGNCLTCVTGLYGTTCQTSCICNGGACKDGPSGDGTCLNCTTGRFGTNCQTTCGCNGGGCVDGPRGTGACLSCTTGRYGASCENSCNCNGDACVDGPTGNGNCLNCTSGWYGANCENACVCNGGTCSDGIGGTGVCTTCPAGRYDPQCAKSCPVGCTNTCFDGISGNGSCKACTKSRYGPLCAQSCACNNGTCNGGILGDGQCTGCPTGVYGSSCQSSCDCGPSGFTCRDGISGTGACLTCASGRYGANCENVCVGCGSDGCNDGVAGNGDCKSCPPNKYGPKCTETCLCNGGTCRDGIKGDGTCTSCTRRFYGTKCLACMCFNGTCSDNATGTGYCAGNCNSGYFGKSCNQMCKCLSDVGVCNLASDGDGTCTSCIAGRFGPNCDGVCSCGEGLTCSEGPTGTGKCVGACRDWKYRPETNCEDCIATRFGPTCDSICSCTVDGQCFFGKTGNGTCKGPCEPFTYGSSCNLTCKCVGGLCNGGLLGDGMCSGPCQDSFTGTLCDSCIAGRFGSKCKECDCVNGEPDDGIDGTGFCHDGVLGDGHCKSGTCDENFVGSDCDECKECVISVSTTGSGLDKAFTGKFPVAVVGGAIGGCIAMLGAFVVFYYRKEIRARLKSRGWISHRFTVSGSRDTLAGIELDIDATHRRAQVLTMLTGDGMNDHDACATIDAEGIIGEIPRHRIRLGENIGSGNFGDVRKAILDPAGIVTAVKSLKDGATAEQNRLFMMEAKLMHEAKHPNIVPILGIITIGKPILLVLEFMANGSLLSYLESNKDDLSRKTLLCMCRDIAAGMVVLERRGLVHRDLAARNILVDSDGTCKIGDFGLARHLDSDYYMSTDVWAFGIVCWEIFTFGQRPYGQTTNAEAVAMIDEGQRLAKPEMANDRIYATMTSCWANEPRNRPPFIKLFTEFQGMILGQSQASQSGAAVEGYVELDPAEAYALYVSPPRLI* # PASA_UPDATE: g13913.t1, single gene model update, valid-1, status:[pasa:asmbl_7730,status:12], valid-1 NODE_4931_length_1131_cov_88.1373 . gene 1 1062 . - . ID=g13913;Name=g13913.t1 NODE_4931_length_1131_cov_88.1373 . mRNA 1 1062 . - . ID=g13913.t1;Parent=g13913;Name=g13913.t1 NODE_4931_length_1131_cov_88.1373 . exon 1 1062 . - . ID=g13913.t1.exon1;Parent=g13913.t1 NODE_4931_length_1131_cov_88.1373 . CDS 1 1062 . - 0 ID=cds.g13913.t1;Parent=g13913.t1;3_prime_partial=true #PROT g13913.t1 g13913 MDFQIGLKNPLPAYTYTSLHNSTNAICPPTTTFSRLYQGTVPSAVIPGGSFTNFFLNLGPVPGQSPECFASAAQAIMCIQTTNGQSYFEVSTKGTMEISFGNFNSVIDYEQPLAPTYFESLVYYAANAEYQCANYNFTENKQYVPVLNACPIDGASLAKQTTVVAAGDISTAEKDWVLARKSAINSPANGQNASAWMTYLNNLNLAGFNSSQNLPVPTIAIAASGGGYRAMFASMGVLSALDVRNADAVGNATGGLLQSATYFAGLSGGGWTVGSIYDADFKPANVLANSFGSFNFWKPNAEEGTMGVAEGWADVIFRTATKKFAGFDVSLTDLWGQMLSKQMMQSMDTRFSDL # PASA_UPDATE: g8940.t1, single gene model update, valid-1, status:[pasa:asmbl_4507,status:12], valid-1 NODE_2529_length_5997_cov_64.2734 . gene 104 3171 . + . ID=g8940;Name=g8940.t1 NODE_2529_length_5997_cov_64.2734 . mRNA 104 3171 . + . ID=g8940.t1;Parent=g8940;Name=g8940.t1 NODE_2529_length_5997_cov_64.2734 . five_prime_UTR 104 104 . + . ID=g8940.t1.utr5p1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 104 233 . + . ID=g8940.t1.exon1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 105 233 . + 0 ID=cds.g8940.t1;Parent=g8940.t1;5_prime_partial=true NODE_2529_length_5997_cov_64.2734 . exon 513 573 . + . ID=g8940.t1.exon2;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 513 573 . + 0 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 932 1119 . + . ID=g8940.t1.exon3;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 932 1119 . + 2 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 1443 1699 . + . ID=g8940.t1.exon4;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 1443 1699 . + 0 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 1899 2001 . + . ID=g8940.t1.exon5;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 1899 2001 . + 1 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 2126 2197 . + . ID=g8940.t1.exon6;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 2126 2197 . + 0 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 2545 2612 . + . ID=g8940.t1.exon7;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 2545 2612 . + 0 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . exon 2935 3171 . + . ID=g8940.t1.exon8;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . CDS 2935 3040 . + 1 ID=cds.g8940.t1;Parent=g8940.t1 NODE_2529_length_5997_cov_64.2734 . three_prime_UTR 3041 3171 . + . ID=g8940.t1.utr3p1;Parent=g8940.t1 #PROT g8940.t1 g8940 TTNITEDAARAALLAYVDKQCCYGKGAANDLVFTDIRSGDAFHYRMESWGEHRSVAWTMEPYRGTPLDGPERGPAPAPWTIPVPTPAPFNNHTMAVEVPHTASQRACYKCGAQGYVRCDSCFGRGSDVCISCDGRGMRVGLHVDHHNHHHHHGGHHHNSHSSSVHAQAQICMMCQGSGRRTCVRCHGRRVIVCSTCEGCRILKLYLKMTVKWTNHVTDSVVDQSGLPSELVSKAQGDVAVQEDGVRVIPIVGFQPLVDSTSQTLVAQHAQAFPSERIHNQRQTVRVVPVSRATYNYKNKALEFWVYGHEHCVHAPKYPHTCLCCTIL* # ORIGINAL: g8941.t1 original gene structure, not modified by PASA NODE_2529_length_5997_cov_64.2734 AUGUSTUS gene 3484 5907 . - . ID=g8941;Name=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS mRNA 3484 5907 . - . ID=g8941.t1;Parent=g8941;Name=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 5757 5907 . - . ID=g8941.t1.exon1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 5757 5907 . - 0 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 5502 5592 . - . ID=g8941.t1.exon2;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 5502 5592 . - 2 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 5037 5139 . - . ID=g8941.t1.exon3;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 5037 5139 . - 1 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 4633 4763 . - . ID=g8941.t1.exon4;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 4633 4763 . - 0 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 4391 4475 . - . ID=g8941.t1.exon5;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 4391 4475 . - 1 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 3917 4012 . - . ID=g8941.t1.exon6;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 3917 4012 . - 0 ID=cds.g8941.t1;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS exon 3484 3567 . - . ID=g8941.t1.exon7;Parent=g8941.t1 NODE_2529_length_5997_cov_64.2734 AUGUSTUS CDS 3484 3567 . - 0 ID=cds.g8941.t1;Parent=g8941.t1 #PROT g8941.t1 g8941 ILTKEFYTLQSQSDKKIAEIESQLGEKNSKLHNYESLEKELDDVIMHAAEVEGDIDSEQLLLSYGYSLNVAGNAKRRLQQSVQLARRVLSQQREITRLKKDLDKEQSKVKTLGEQVAETNAILDSTQQPYNYLVDTIRARDKDIRACREHIELLEEEVKSLNRERSELVRAKNQMASDIERLLAHRQELEVMRKVVVGLQSRAIADQQTAHRDDGRIQMLRPVDGDNAPSWHDRLKGIRSAHAKVV* # ORIGINAL: g8724.t1 original gene structure, not modified by PASA NODE_2038_length_7990_cov_45.3098 AUGUSTUS gene 5255 7425 . + . ID=g8724;Name=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS mRNA 5255 7425 . + . ID=g8724.t1;Parent=g8724;Name=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 5255 5344 . + . ID=g8724.t1.exon1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 5255 5344 . + 0 ID=cds.g8724.t1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 5636 5731 . + . ID=g8724.t1.exon2;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 5636 5731 . + 0 ID=cds.g8724.t1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 5972 6115 . + . ID=g8724.t1.exon3;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 5972 6115 . + 0 ID=cds.g8724.t1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 6302 6389 . + . ID=g8724.t1.exon4;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 6302 6389 . + 0 ID=cds.g8724.t1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 6806 6860 . + . ID=g8724.t1.exon5;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 6806 6860 . + 2 ID=cds.g8724.t1;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 7242 7425 . + . ID=g8724.t1.exon6;Parent=g8724.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 7242 7425 . + 1 ID=cds.g8724.t1;Parent=g8724.t1 #PROT g8724.t1 g8724 MADQSSVLLRTAAIDFGIQWVLCVFAVLLKTEKFYDLAGSSTFIIVSLYTALSNEGALHPRQLLLTGFIVVWAGRLGSFLFARILADGTDRRFEKAKKSSVVFLVFWTIQGVWVFVTALPVLIVNTTAGNPDLGVTDYIGAAIWAIGFLIEVVADAQKRHFKSRADSHSTWIEEGLWKYSRHPNYFGEIAVWWGVFVVASSALTPGYEYFGECIIKAL* # ORIGINAL: g8723.t1 original gene structure, not modified by PASA NODE_2038_length_7990_cov_45.3098 AUGUSTUS gene 1821 4251 . + . ID=g8723;Name=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS mRNA 1821 4251 . + . ID=g8723.t1;Parent=g8723;Name=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 1821 2044 . + . ID=g8723.t1.exon1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 1821 2044 . + 0 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 2214 2306 . + . ID=g8723.t1.exon2;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 2214 2306 . + 1 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 2450 2536 . + . ID=g8723.t1.exon3;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 2450 2536 . + 1 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 2689 2797 . + . ID=g8723.t1.exon4;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 2689 2797 . + 1 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 3124 3248 . + . ID=g8723.t1.exon5;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 3124 3248 . + 0 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 3459 3594 . + . ID=g8723.t1.exon6;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 3459 3594 . + 1 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 3786 3856 . + . ID=g8723.t1.exon7;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 3786 3856 . + 0 ID=cds.g8723.t1;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS exon 4122 4251 . + . ID=g8723.t1.exon8;Parent=g8723.t1 NODE_2038_length_7990_cov_45.3098 AUGUSTUS CDS 4122 4251 . + 1 ID=cds.g8723.t1;Parent=g8723.t1 #PROT g8723.t1 g8723 MAPHVVDSAVTAANSRSNATTAALSDNAYSAEVRRGSRRAVKIGIDEINVPDTAWPTVALFVAAIGTWLLSGYLRLAMGIPWHFTVPLSAVATFVIFTPMHDAVHRSVSKKHRWLNDGVGRICALFFMAPLPAFKYVHLEHHKHTNDPEKDPDFWSGEGPNFLKPLRWMTQELHYYIPFFSNIRVHRVVDVVETVSTVVALLAVIYASCINGRFADVAVIWLLPVRIAVPFLAYTFDYIPHRPHVETRATNPYLATSKVDGIFSTGFGELLTLALLWQNYHNIHHLWPMVPFYRYSKIWFKHKDDLLLAGTPVVPMIDTKRPWW* # PASA_UPDATE: g8722.t1, single gene model update, valid-1, status:[pasa:asmbl_3333,status:12], valid-1 NODE_2038_length_7990_cov_45.3098 . gene 164 1035 . - . ID=g8722;Name=g8722.t1 NODE_2038_length_7990_cov_45.3098 . mRNA 164 1035 . - . ID=g8722.t1;Parent=g8722;Name=g8722.t1 NODE_2038_length_7990_cov_45.3098 . five_prime_UTR 1032 1035 . - . ID=g8722.t1.utr5p1;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . exon 840 1035 . - . ID=g8722.t1.exon1;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . CDS 840 1031 . - 0 ID=cds.g8722.t1;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . exon 569 650 . - . ID=g8722.t1.exon2;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . CDS 569 650 . - 0 ID=cds.g8722.t1;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . exon 338 365 . - . ID=g8722.t1.exon3;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . CDS 338 365 . - 2 ID=cds.g8722.t1;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . exon 164 191 . - . ID=g8722.t1.exon4;Parent=g8722.t1 NODE_2038_length_7990_cov_45.3098 . CDS 164 191 . - 1 ID=cds.g8722.t1;Parent=g8722.t1;3_prime_partial=true #PROT g8722.t1 g8722 MANVNFSVPAPALSILVYLHAFLGILGCTTSYLNAGYWFSNFGLSMVGYAMLASHSENAKLLQMYLVTLTFTIMNDCIALGIFTTDATVFDSTNEQKFTFAMALINLIFK # ORIGINAL: g11420.t1 original gene structure, not modified by PASA NODE_3480_length_3369_cov_40.5182 AUGUSTUS gene 1014 2892 . + . ID=g11420;Name=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS mRNA 1014 2892 . + . ID=g11420.t1;Parent=g11420;Name=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS exon 1014 1993 . + . ID=g11420.t1.exon1;Parent=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS CDS 1014 1993 . + 0 ID=cds.g11420.t1;Parent=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS exon 2171 2347 . + . ID=g11420.t1.exon2;Parent=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS CDS 2171 2347 . + 1 ID=cds.g11420.t1;Parent=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS exon 2724 2892 . + . ID=g11420.t1.exon3;Parent=g11420.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS CDS 2724 2892 . + 1 ID=cds.g11420.t1;Parent=g11420.t1 #PROT g11420.t1 g11420 MCGIFLALAAIFGAFSILVASTSARSNASLTSFEQMSRKRTVRLATVAEHETACISRTHVALATGLGLLNSTSVRTSNTSAALFVGDISFGRDIQSIAFNRYHGCFTYVFDYVRDILLSGDVTVANLESPLVGIEEWRRWAPSGIKKRILMRGHPDGAHALAWAGIDVVNLSNNHVFDYGGEGVNETMARLARVGVQHVGITFGRKAVSSGQVPAVHRLRNGVTLVMLSYCMLPTLCARDRRLVDAGPAIYTDDAAYADVRAVQAAYAGKEGIRLAIAVSLHWGVEYRTAPDGFMIGAASHFAGLGVDIVHGHHQHVLLGHSFYRKRGGGHTFVMFGTGNFVFDSHTCWNVDGTRIQLEDNLACDRLDAAQKQSVPLEVRKTRIYRAHMSPEGSVVSAEYLPCTLVRDFADPIYQPAPVDDAYWVPVCRNDDSLCLQQESF* # ORIGINAL: g11419.t1 original gene structure, not modified by PASA NODE_3480_length_3369_cov_40.5182 AUGUSTUS gene 271 369 . + . ID=g11419;Name=g11419.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS mRNA 271 369 . + . ID=g11419.t1;Parent=g11419;Name=g11419.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS exon 271 369 . + . ID=g11419.t1.exon1;Parent=g11419.t1 NODE_3480_length_3369_cov_40.5182 AUGUSTUS CDS 271 369 . + 0 ID=cds.g11419.t1;Parent=g11419.t1 #PROT g11419.t1 g11419 SPRRLSTSEVLEQELRAKALASLRKKDDRDES* # PASA_UPDATE: g13631.t1, single gene model update, valid-1, status:[pasa:asmbl_6040,status:12], valid-1 NODE_3417_length_3516_cov_32.1805 . gene 296 3446 . + . ID=g13631;Name=g13631.t1 NODE_3417_length_3516_cov_32.1805 . mRNA 296 3446 . + . ID=g13631.t1;Parent=g13631;Name=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 296 568 . + . ID=g13631.t1.exon1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 296 568 . + 0 ID=cds.g13631.t1;Parent=g13631.t1;5_prime_partial=true NODE_3417_length_3516_cov_32.1805 . exon 955 1032 . + . ID=g13631.t1.exon2;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 955 1032 . + 0 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 1277 1361 . + . ID=g13631.t1.exon3;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 1277 1361 . + 0 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 1578 1681 . + . ID=g13631.t1.exon4;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 1578 1681 . + 2 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 2002 2134 . + . ID=g13631.t1.exon5;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 2002 2134 . + 0 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 2401 2464 . + . ID=g13631.t1.exon6;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 2401 2464 . + 2 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 2596 2662 . + . ID=g13631.t1.exon7;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 2596 2662 . + 1 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 2877 3023 . + . ID=g13631.t1.exon8;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 2877 3023 . + 0 ID=cds.g13631.t1;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . exon 3359 3446 . + . ID=g13631.t1.exon9;Parent=g13631.t1 NODE_3417_length_3516_cov_32.1805 . CDS 3359 3446 . + 0 ID=cds.g13631.t1;Parent=g13631.t1;3_prime_partial=true #PROT g13631.t1 g13631 SPHENPPHIYALADNMYRNMLIETENQCVIISGESGAGKTVCAKYIMSYIARISGGGAKVQRVKDVILESNPLLEAFGNAKTIRNNNSSRFGKYFEIQFSRGGEPDGGRISNFLLEKSRVVGQNPDERNFHIFYQMLFGASQQEKESLGLAGPEYFNYLNTTGCFTVDGTDDVEEWHAVKKSMTVMDISPQNVEDILKITAGVLHLGNIVFVEDGNTARVTDPQFLEFPAYLLGVDAGILNEKLTSRIMESKWGGKTEITNVTLNKEQSTITRDALAKALYSRVFDFLVLAINKAMEKKKEELAIGVLDIYGFEIFKRNGFEQFCINFVNEKLQQIFIELTLKAEQ # ORIGINAL: g6353.t1 original gene structure, not modified by PASA NODE_1651_length_9998_cov_46.3908 AUGUSTUS gene 9004 9834 . - . ID=g6353;Name=g6353.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS mRNA 9004 9834 . - . ID=g6353.t1;Parent=g6353;Name=g6353.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 9004 9834 . - . ID=g6353.t1.exon1;Parent=g6353.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 9004 9834 . - 0 ID=cds.g6353.t1;Parent=g6353.t1 #PROT g6353.t1 g6353 MHRRIAERKGAPAVTSGSFDKKPPAKIKFDVTDTLTRMLAEASNLYAKEASSVIVKVLEFDSYGRNLAKSAGVSPDSYAQSAMLSTFRRLHGFVPATYESVVTTRFKKGRTETGRTATIASAAFANAMTAGSRVTDTERLDLLRRASDAHVNYIRDASMGKGVDRHLLGLRMMAVEAGIATPALFDDLVLQRSSRWVLSTSHLPGAHASVASCFRPVAGDGYGILYQVYDNRMVFTITSYASCKERDARSFAAELSAVFGEMARIASVSANTKSKL* # ORIGINAL: g6351.t1 original gene structure, not modified by PASA NODE_1651_length_9998_cov_46.3908 AUGUSTUS gene 227 976 . - . ID=g6351;Name=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS mRNA 227 976 . - . ID=g6351.t1;Parent=g6351;Name=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 953 976 . - . ID=g6351.t1.exon1;Parent=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 953 976 . - 0 ID=cds.g6351.t1;Parent=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 541 655 . - . ID=g6351.t1.exon2;Parent=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 541 655 . - 0 ID=cds.g6351.t1;Parent=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 227 322 . - . ID=g6351.t1.exon3;Parent=g6351.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 227 322 . - 2 ID=cds.g6351.t1;Parent=g6351.t1 #PROT g6351.t1 g6351 MFIYLSKKLAVPNNTNLRSLAWNKEQGWIACGGDDGLLKVLKLDNPDAKSAKGVPQSPAQAQPSQSNLSMNQNLEGHN # ORIGINAL: g6352.t1 original gene structure, not modified by PASA NODE_1651_length_9998_cov_46.3908 AUGUSTUS gene 1750 7704 . + . ID=g6352;Name=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS mRNA 1750 7704 . + . ID=g6352.t1;Parent=g6352;Name=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 1750 1818 . + . ID=g6352.t1.exon1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 1750 1818 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 2077 2183 . + . ID=g6352.t1.exon2;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 2077 2183 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 2386 2500 . + . ID=g6352.t1.exon3;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 2386 2500 . + 1 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 2686 3968 . + . ID=g6352.t1.exon4;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 2686 3968 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 4108 4342 . + . ID=g6352.t1.exon5;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 4108 4342 . + 1 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 4714 4852 . + . ID=g6352.t1.exon6;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 4714 4852 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 5140 5366 . + . ID=g6352.t1.exon7;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 5140 5366 . + 2 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 5701 5979 . + . ID=g6352.t1.exon8;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 5701 5979 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 6154 6453 . + . ID=g6352.t1.exon9;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 6154 6453 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 6672 6797 . + . ID=g6352.t1.exon10;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 6672 6797 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 7156 7432 . + . ID=g6352.t1.exon11;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 7156 7432 . + 0 ID=cds.g6352.t1;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS exon 7661 7704 . + . ID=g6352.t1.exon12;Parent=g6352.t1 NODE_1651_length_9998_cov_46.3908 AUGUSTUS CDS 7661 7704 . + 2 ID=cds.g6352.t1;Parent=g6352.t1 #PROT g6352.t1 g6352 MGPIDRAAEDGAERLIAAIAGLENPSENFTIAKNFVLSNFKYHRFLDADSHKINRTYEGLVEKFEIHAQYDKAEALSQLLNRLKEIRTARLSGVAEKLSVHYPTLSLLSLLANAPTEIDYEPSPRFRPPTDEEAAFDWAAELRQDLSEWSHECDLRDDDEGDDHSASSESDEGGDDSDYEGNDAEIDVIDASRVVDGASHGYDGLAEDDGDVRMRGLMSGAALRECADRAIVRRYWEAGNADTPLTVSATSLCARLAAHRLAHSGLPRSLRPSVVLRERELVAEVLWMLGGAPTHAFGGAKLPTRHVGHASRAIDNENGASSAAGGLAILPGLCLAEVSDRAVASVCDVFVGLASTVRSIEEFCAFATRGWYGLCHQAYAASATGILEDYRAELSRLERHARHGGLSLICLKRELAPVAHRIRLLSRTTTECVLPHESPADNANRASFLMTSLMGLLCELDIAMYAPPTPPNINGDADTDRRQDDRRVVLRLLCDSARPYLAMLDEWMGSGTVSADPYSEFAVTCDPAMPASSSTYWSHAVSVRDVPRPYPRGSNAGNQPALRNHEAQPSPTAACGVPAFLLPRLHEVVLAGKSMRLLRHMDERHGLGTQQTSEQSHEKEPSRERLGDAFVRMMTAAVEGGVCRTQQQQAFKDAIPTSRSTAPVGVQLASFLDAVTALYVSTCGRLLRRLEDECLLSAHLGALTDVYLMAAGGAMHEFSTAVFEKIEAGENWRDPTFLAASLQHAIALRGRSSASRLSTLSLSNSTTDLLAHAGESRGAHVSDASESATDPFELFDVSADGEGGALVETLDALRLHFHVQWPLEFIVDRAAVDEYNRAFGFMLRMKRAKWTLERLRWKRGAPTICAPAAPAAPLASGSRVPMASSSGAPYAPLQHPLRLLRAKLLHFTNTLHTHIVTRVLHSEGLEFRSAVARASDLDEVIAAHRTYISTVIDRCLLGDKVAMVRDAITKMLNLTLVFASLWGSCAVSTDVQSAGGSSHNPLWTHVTGVHRQPMSPCEALAEVGRIDGEYTRFVRFVVSLIGGIIRRGAHPHLEALIISLGTTNAL* # PASA_UPDATE: g3167.t1, single gene model update, valid-1, status:[pasa:asmbl_6514,status:12], valid-1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . gene 264 2791 . + . ID=g3167;Name=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . mRNA 264 2791 . + . ID=g3167.t1;Parent=g3167;Name=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . five_prime_UTR 264 265 . + . ID=g3167.t1.utr5p1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 264 335 . + . ID=g3167.t1.exon1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 266 335 . + 0 ID=cds.g3167.t1;Parent=g3167.t1;5_prime_partial=true NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 557 637 . + . ID=g3167.t1.exon2;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 557 637 . + 2 ID=cds.g3167.t1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 880 954 . + . ID=g3167.t1.exon3;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 880 954 . + 2 ID=cds.g3167.t1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 1267 1344 . + . ID=g3167.t1.exon4;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 1267 1344 . + 2 ID=cds.g3167.t1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 1541 1639 . + . ID=g3167.t1.exon5;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 1541 1639 . + 2 ID=cds.g3167.t1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 1911 2082 . + . ID=g3167.t1.exon6;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 1911 2082 . + 2 ID=cds.g3167.t1;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . exon 2455 2791 . + . ID=g3167.t1.exon7;Parent=g3167.t1 NODE_3769_length_2791_cov_26.1064_potentialcontaminant . CDS 2455 2791 . + 1 ID=cds.g3167.t1;Parent=g3167.t1;3_prime_partial=true #PROT g3167.t1 g3167 NTGRSILYFEDDSNAAVNSTTFVGNIALQSGGVAYMGQRTRLVTDSCLFQNNVGDEGGVIAVNKGNLIVINGTFTGNRATNAGVIRLETTAYATITTSTFRGNRAMVVKYQYGLGGVVHATESASLAITSSTFIGNRADRNGGAISVDDSVNVTVASTSFKWNVAANAYGGAVHSAGHQFLSIGNSVFTANRALFGGGAIAVASTRSADAGVSGCTFTANAAREGYVLFSSAPTSVASGYFANSLFYGNRKAVANAATLPDLGADATVSAYDDITIFGGSNTSDFSSVVAGTVWASPQTSAAYF # PASA_UPDATE: g168.t1, single gene model update, valid-1, status:[pasa:asmbl_6259,status:12],[pasa:asmbl_6260,status:12], valid-1 NODE_3591_length_3142_cov_38.2638 . gene 1025 3038 . - . ID=g168;Name=g168.t1 NODE_3591_length_3142_cov_38.2638 . mRNA 1025 3038 . - . ID=g168.t1;Parent=g168;Name=g168.t1 NODE_3591_length_3142_cov_38.2638 . five_prime_UTR 3038 3038 . - . ID=g168.t1.utr5p1;Parent=g168.t1 NODE_3591_length_3142_cov_38.2638 . exon 2866 3038 . - . ID=g168.t1.exon1;Parent=g168.t1 NODE_3591_length_3142_cov_38.2638 . CDS 2866 3037 . - 0 ID=cds.g168.t1;Parent=g168.t1;5_prime_partial=true NODE_3591_length_3142_cov_38.2638 . exon 1025 2595 . - . ID=g168.t1.exon2;Parent=g168.t1 NODE_3591_length_3142_cov_38.2638 . CDS 1832 2595 . - 2 ID=cds.g168.t1;Parent=g168.t1 NODE_3591_length_3142_cov_38.2638 . three_prime_UTR 1025 1831 . - . ID=g168.t1.utr3p1;Parent=g168.t1 #PROT g168.t1 g168 LLTGDPAQRYTIQDALNHPWIAHGDRVASEIHRQGTIEELRRFNARQKFKGAVLTAIAATSRLTTLTGSSPNNRSNPDIAKAAGEEQSAPATAPSASAAPPASPSSTSGGKVPMINVNTDAGGGVASAAGPLSPSPSAATMLGISSPAMSHSATVIAAGPGTGEKQAETEVLLANEKLLACIGRNDWEAYRQMCDPTLTAFEPEAVGELVQGMDFHKFYFDGAAATTAGASAPASGSRSQATVKNARVRVMGDTAVHTATRIVQSHSSANGFRTRRYEETRVWRRVADNNGNLGAWRMVHFHRSDGGMWPK* # ORIGINAL: g1360.t1 original gene structure, not modified by PASA NODE_3849_length_2630_cov_33.0415 AUGUSTUS gene 90 2303 . + . ID=g1360;Name=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS mRNA 90 2303 . + . ID=g1360.t1;Parent=g1360;Name=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 90 221 . + . ID=g1360.t1.exon1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 90 221 . + 0 ID=cds.g1360.t1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 587 733 . + . ID=g1360.t1.exon2;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 587 733 . + 0 ID=cds.g1360.t1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 843 984 . + . ID=g1360.t1.exon3;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 843 984 . + 0 ID=cds.g1360.t1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 1214 1413 . + . ID=g1360.t1.exon4;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 1214 1413 . + 2 ID=cds.g1360.t1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 1610 1681 . + . ID=g1360.t1.exon5;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 1610 1681 . + 0 ID=cds.g1360.t1;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS exon 2022 2303 . + . ID=g1360.t1.exon6;Parent=g1360.t1 NODE_3849_length_2630_cov_33.0415 AUGUSTUS CDS 2022 2303 . + 0 ID=cds.g1360.t1;Parent=g1360.t1 #PROT g1360.t1 g1360 ILVFKYVDDKDVFQKFYSKMLAKRLIHGMSVSDEAEMLLISHLKQACGYEYTSKLQRMFTDMGVSADHNATFRDFRDAASINLGFDFHILVLQAGAWPLGQSLITFNIPQEMERCVQTFEAFYNKKYSGRRLSWLHNLGKGEVRAEFGGKRYEVGVTTFQMGILLLFNSAHVVTLGDMESNTALKEAELRRNVKSLVDAGLLLASSQADEWEDGVSFTVNENFTSKRTKIKVSNVVQAETQGETETTRRSVDEDRKLYLQAAIVRVMKSRKALTHTQLMDEVIKQSTVRFSPPVPLIKKCIEMLIDKGYLERIEGTRDKYSYIA* # PASA_UPDATE: g5163.t1, single gene model update, valid-1, status:[pasa:asmbl_6551,status:12], valid-1 NODE_3795_length_2736_cov_38.1436 . gene 2 2265 . + . ID=g5163;Name=g5163.t1 NODE_3795_length_2736_cov_38.1436 . mRNA 2 2265 . + . ID=g5163.t1;Parent=g5163;Name=g5163.t1 NODE_3795_length_2736_cov_38.1436 . five_prime_UTR 2 2 . + . ID=g5163.t1.utr5p1;Parent=g5163.t1 NODE_3795_length_2736_cov_38.1436 . exon 2 233 . + . ID=g5163.t1.exon1;Parent=g5163.t1 NODE_3795_length_2736_cov_38.1436 . CDS 3 233 . + 0 ID=cds.g5163.t1;Parent=g5163.t1;5_prime_partial=true NODE_3795_length_2736_cov_38.1436 . exon 525 2265 . + . ID=g5163.t1.exon2;Parent=g5163.t1 NODE_3795_length_2736_cov_38.1436 . CDS 525 1865 . + 0 ID=cds.g5163.t1;Parent=g5163.t1 NODE_3795_length_2736_cov_38.1436 . three_prime_UTR 1866 2265 . + . ID=g5163.t1.utr3p1;Parent=g5163.t1 #PROT g5163.t1 g5163 LMCADAADLIAGMLQVNPGRRYTRDQIRVHPWTMHGFTDEPSAERLPAINEIPLDRAVMIEMEIHDFDVKEVDKSMKAGEMNRITATYRLIAARRARDQRRKTAVDRVALLLENMGTKDQKTGLTVTAADKTVAALVSPRPPPPRISEPARPRQQPPPAQSNPPDAAAAAATQQPQHLSPRAQAGQPQPPSPALTTPAPDTPVPSLDIKSIEKVDEPPVILQPVPPGAFRKRVLTDAGQAEKAREAAAVLAVAEEEFRGRSHTVATARPDTQEFAPKPSRRESAPNPFGNGLDPLAEENTDGTSIPKASPNARRRTSFQSPILDRIKQRFIRSAPNSPRRGSTKGDGQSAGDDNSEGGSVTGGETAEENESNESISPLPSPRVRRQSKDEGASGSGTTGKRHFSLDNATGALLAALRRKHGSKNPYGLRSVKGAFNCSTTTTRDPPDIVAEVSRVLEGAKGRGMRFAMAGEWTFLCHNGDIRFEIEICRIKQIGLNGLHLKRVAGDAWAYKKLVDELIPEFKL* # PASA_UPDATE: g10289.t1, single gene model update, valid-1, status:[pasa:asmbl_9135,status:3], valid-1 NODE_73_length_44586_cov_41.4199 . gene 12804 14412 . + . ID=g10289;Name=g10289.t1 NODE_73_length_44586_cov_41.4199 . mRNA 12804 14412 . + . ID=g10289.t1;Parent=g10289;Name=g10289.t1 NODE_73_length_44586_cov_41.4199 . five_prime_UTR 12804 12884 . + . ID=g10289.t1.utr5p1;Parent=g10289.t1 NODE_73_length_44586_cov_41.4199 . exon 12804 13076 . + . ID=g10289.t1.exon1;Parent=g10289.t1 NODE_73_length_44586_cov_41.4199 . CDS 12885 13076 . + 0 ID=cds.g10289.t1;Parent=g10289.t1 NODE_73_length_44586_cov_41.4199 . exon 13214 14412 . + . ID=g10289.t1.exon2;Parent=g10289.t1 NODE_73_length_44586_cov_41.4199 . CDS 13214 14182 . + 0 ID=cds.g10289.t1;Parent=g10289.t1 NODE_73_length_44586_cov_41.4199 . three_prime_UTR 14183 14412 . + . ID=g10289.t1.utr3p1;Parent=g10289.t1 #PROT g10289.t1 g10289 MNDMCCGATETSVADKACLMQESQPANMGPAKDIVCARSYPFRMERIPRYHWRDPAAKERIAQGIPVVLTGTDLVKSAVDKWSLSYLVDNIGSNDFTVYGSSTNKFMYHDEARNAGKYSYVPPTRKTSMKFGEFVEALTRQQQNPNCEKVYLQQTLDDRVGQPIINDFLGFNWKLLGDLVKGVEWGELTTNLLLVSGKGALTPAHYDEQQNFFSQISGTKRCVLFSPADFEGLYPFPVHHPCDRQSQVDFDNPDYERFPNFRNVCGYEAMVGAGDVLYIPMYWWHHIETLTDSISVNFWHKAAPIRPGRISYPLSASQKVAMKRNIEKMLGEALGNPGEIGEFLHALVDGRFPPLTSSFSSDLATAMEITPSVPSSVQIPQSVSRS* # PASA_UPDATE: g10293.t1, single gene model update, valid-1, status:[pasa:asmbl_9131,status:12], valid-1 NODE_73_length_44586_cov_41.4199 . gene 27163 30517 . - . ID=g10293;Name=g10293.t1 NODE_73_length_44586_cov_41.4199 . mRNA 27163 30517 . - . ID=g10293.t1;Parent=g10293;Name=g10293.t1 NODE_73_length_44586_cov_41.4199 . exon 30317 30517 . - . ID=g10293.t1.exon1;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . CDS 30317 30517 . - 0 ID=cds.g10293.t1;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . exon 29601 29911 . - . ID=g10293.t1.exon2;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . CDS 29601 29911 . - 0 ID=cds.g10293.t1;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . exon 29121 29289 . - . ID=g10293.t1.exon3;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . CDS 29121 29289 . - 1 ID=cds.g10293.t1;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . exon 27163 28903 . - . ID=g10293.t1.exon4;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . CDS 27266 28903 . - 0 ID=cds.g10293.t1;Parent=g10293.t1 NODE_73_length_44586_cov_41.4199 . three_prime_UTR 27163 27265 . - . ID=g10293.t1.utr3p1;Parent=g10293.t1 #PROT g10293.t1 g10293 MPILGLIASGLSWLSSGAAQSPASARLSAEQTDGPAVALVGFSADDARTDMAQRAISSLGGRVHNEPAQGRWMEVTFGGEDDAIADRMDRASQRWAALRTSNGAADTLGGTYSKPDCNKDSGAFFCDSDEDDDVAECDGNGGKSVGSALPFAGWKAVVLLPNALLRDDIVRAIIAGGGNIVTSLADAPTHAIVDDSRTIDDASDLLQAASAGCLCLAWRFVRDVVMMPKPPKADHYSIFEDDQQGSQPIRSDHVTATHAPPQSPSAPITASVTGSVTGVAVTPERTPNNSAVQCAPTPRHLTLTPALRSKRPAADSSGAPPKRRKNMLMGQAGMVDASIDDREYAFAVALTRAIVNPAVCPPPALAKRLFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHAADTWQVVRDAMACPDAGARGEAIALIASSLTREYESHMTAASARNSAVVALAKHVGLRDLAGSLCERLAVAVAEDDRATLAPIQRLIALAYECAPHALSTAATEGKPATVRQPRRALQPRQEDTPNPPSATSATRRGAAKTYAQTPAEVHVQPSGDACCIQRSAMVTVLASHFDALLERSTLLHARVLLDSCESADLLCSTGELLIARHCDGMSSLPDALTQMPFTERLAQYLDLAPSRGRKTSIAAWVERYAALLATVVSSAIASGRLQKGEIVPSIVKSASNHITAHAGRTWGVVVTASVARMEAAIACALMN* # PASA_UPDATE: g10294.t1, single gene model update, valid-1, status:[pasa:asmbl_9132,status:12], valid-1 NODE_73_length_44586_cov_41.4199 . gene 31355 35201 . + . ID=g10294;Name=g10294.t1 NODE_73_length_44586_cov_41.4199 . mRNA 31355 35201 . + . ID=g10294.t1;Parent=g10294;Name=g10294.t1 NODE_73_length_44586_cov_41.4199 . exon 31355 32599 . + . ID=g10294.t1.exon1;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . CDS 31355 32599 . + 0 ID=cds.g10294.t1;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . exon 32745 33166 . + . ID=g10294.t1.exon2;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . CDS 32745 33166 . + 0 ID=cds.g10294.t1;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . exon 33264 35201 . + . ID=g10294.t1.exon3;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . CDS 33264 35160 . + 1 ID=cds.g10294.t1;Parent=g10294.t1 NODE_73_length_44586_cov_41.4199 . three_prime_UTR 35161 35201 . + . ID=g10294.t1.utr3p1;Parent=g10294.t1 #PROT g10294.t1 g10294 MASSSTPKRTAENVRFLLSRMSNEEKSYMKSMFIKQSPQQGRFQRRVWDKETFLRVFPLPGILGERLFETFDVNGSKSIDFDEFLEGYARLVYGSHSDKYAVVFHVYNVRSDPQGISASDLRTMLHCSLMLVAQESLDGAQAGGAGDAAMSHQLNADIAQRVDAMVEDAFTTHPMGTRGKLDYDRFVAWAGHHPIVADSICHSQVIMKKLSADVQRRTSLPMGPSSPFSPAVAAVRTSGSAGAHHRSVSLGTAFDFAAAAAASASVSATSEGMATAAPSEAIDSPRTPAAPAQTAVQGGAARTEKEGYLYKIRGTSQYHRYYVLRDGSMHQMKHPNDRTPKKSVFISGDVVDVSLPPVQAGTKLLPLKIVVNHDAAGALVIATESERERMEWKNAIQEATRNTSVTDNYDVLQNEPLGKGRNSEVCVAVSRRTGERCACKIVLKAGLEVGEQEELLYEAAMLRMLSHPYVLRLRAVYDAPHAFYIITELLAGGDLLARMEARESEKATFGEHETRRVVHMLLEGIEYIHSVGIVHRDIKPGNIMFVSRAADSPIKLAVARDVVPCKCLLFLNEQKTSTIRSVDFGLSKFLRPGEVIADQCGTVKYFAPEMVRREAYNWSVDIWAIGITAYRMLCGHFPFDARGDDELVDQIASGKFNKTSPSYKALSEQAAKFLCTLLAPSPHDRPSAKEALTHPWLHGAAAVGSLRVVPSLELSDDEFGDGSGKDGHMADVPLRRFRPDVRYWDEMLSAFISAFRAVAASSSKAPSVHGAQRLHAELLGSDGLLPASIMFYCTSRCSAGSERAKLATVAASKFVNGSDSAAEEDVGRRLVNLHSYYCRYRRLVELKSASESVKESGGDGHNTEPGSRRGSDAIVDSAELASLTTLSSACDSLLRLMLSQRAEDLGALASSALSENSLNENAQRHILAGMSNAQAAYEKCGIRGPLLSVACAVLIAHVGDEALELLFMRPGLATPVWGMSLRYLLSSLEEWASHRTKTPAFTNAPHGLGLASYRQLSSSTGNLAQTLSVDMPEVSLANETRVLLGPAIGCARVLQSDVARLGDAAVADMCEGIGEARTKRLMEIARIVAGKITAAEETPAPDTGMSLERKRSLSLRNRTASSLGLTPLPPQKELGGWIGHALVACTAPYDPFLGPDASTVGDVRLPREMVVPGLRSMSSSETGSGRR* # PASA_UPDATE: g10290.t1, single gene model update, valid-1, status:[pasa:asmbl_9130,status:12], valid-1 NODE_73_length_44586_cov_41.4199 . gene 14892 21526 . + . ID=g10290;Name=g10290.t1 NODE_73_length_44586_cov_41.4199 . mRNA 14892 21526 . + . ID=g10290.t1;Parent=g10290;Name=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 14892 14943 . + . ID=g10290.t1.exon1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 14892 14943 . + 0 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 15097 15550 . + . ID=g10290.t1.exon2;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 15097 15550 . + 2 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 15765 17951 . + . ID=g10290.t1.exon3;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 15765 17951 . + 1 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 18203 19418 . + . ID=g10290.t1.exon4;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 18203 19418 . + 1 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 19733 19851 . + . ID=g10290.t1.exon5;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 19733 19851 . + 0 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 19999 20071 . + . ID=g10290.t1.exon6;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 19999 20071 . + 1 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 20256 20670 . + . ID=g10290.t1.exon7;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 20256 20670 . + 0 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 20905 20990 . + . ID=g10290.t1.exon8;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 20905 20990 . + 2 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . exon 21224 21526 . + . ID=g10290.t1.exon9;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . CDS 21224 21502 . + 0 ID=cds.g10290.t1;Parent=g10290.t1 NODE_73_length_44586_cov_41.4199 . three_prime_UTR 21503 21526 . + . ID=g10290.t1.utr3p1;Parent=g10290.t1 #PROT g10290.t1 g10290 MGAKGSRVVPYDEALKRVDDSELVSLQATFKRNFGPTLLMPKHVFVSGAFGEGTPQHIVERVFHVLGGTDRGIHFKDYLCGRVVFRCGTQPERIRFVFDVYDVNGTGGLSRDDLEVVLTSEGLSSADAASMLSRFSREEPKITFEQFAQWAEAYRSATCLIAWIYTPASAESKQTMAVPTIYETLASVSSFRPTDVQDLERSYYDLVTKSPSGRLDCATLAGELSPLIPEPVTRALFERMDENNDKALDFREFVRGFSECVAAPRERRLLYIFRALAKETGGVLSESLLCKLLEGVALIDAPDGSGAAEERKGDKEGGQGPEQAQSQSQPPEAAHDHVHGHMQGQKRQRRRAPSIADAAASCVRTYGADGTLNEGGFLAWCEAFGAAAAQQKSDVPPLSLARLADALWEVAHVTLGLRPQKASAEGSLIRGWIARERMRTPCEGDVWHPVALSWWNTWAAYVDAERKGAQRQSFSQQQQQQPGHLAQGHVIPATVADDLTPPPIDNAALAAPETKGGGIPLLTECGNRLRPQLIENTDYVVVPEKVWNALVGWYGGGPAMPRRFVPMPHQLNSSKHGKSVVPLELEMYPLVLSVFRHTPTPANGVSASPDGPKRFLAYNAIHTRRATVRSLTAFIVTQQRRAVGGVMGLNLDDARLYLVRDDASPPRLLHDEEMRLEDAGIVDGSKLLLEMRSQDLTWPEEMHALARKEQLKRDREAAAAKAAAKREKDARKGKGVASGTLSLSGTASGNVSGVAILTDDSAPMTPLAGVSTEALDAGTVIVNGEIGLTGLSNLGNTCFMNSALQCLSNTSPLREYFLSRCHSFEYNLTNKLGMKGHIAKLYGELLREIWSGRARSIAPLKLRAAIGKYASRFDSYQQQDSQELLAFLLDGLHEDLNRVTEKPYTELRDADGRSDEQVSLEWWENHLRRNRSIVVDLFHGQLRSQLTCCTCGHRSATFDPFTFLTVPLPLETHSFHEVVVFDVCEARPVRYGLRLPMTSTIGELRDALSALCGIPADQLVIAEVWGPWATTYLGRAHKTRGGVSGMLAAYRACADNPDEDIHVLPITSSTTAEPASDVASPFGQKGPSVGIGRLISNFGRRLSSGVAEMFLGRKSDRDRAGVSGYQQGYRPPPPPAGCIVAYSRRPKKCELDYMYSARPSLFGTTLVMSPVSPLLGRVLTRREFYEDVWRRHARLFDAKAREEWEAKVAQGTFPFVLRWADAGGVLCGLCSWERFCVGCAIPSDDTPFLLPTPAPASRDGTADASGSGSGSGSDPRTNQSTAFVAIDWEPPLLHLHYDSEGERIVTEHASVLAIRAEQKEAISLEECLASFTKEEELGDDELWRCSKCNDFRKATKKMEIWRLPQILIIHLKRFQYATGRWVKSQKLIRFPAEGLDPSRFVVGPESPSYVPSKPVLGETAAHDGVREDVDGGVRAANGADVRREEGADDSAIAQEPTAVSAETADVSVVHPGEATTSAAAAAAAAVTGKESTAIGSHGSAVCTSTEASLCDSSLGTLDVGQQRQPPLFDLYAVTSHVGVMGGGHYVGYARNPNSKWYCFNDSKCEELKGGGDDLPLASAYVLFYERRGLDAKSLLPKFAADAKEIGLESGDDAAAGGRRRDVCCAM* # ORIGINAL: g10287.t1 original gene structure, not modified by PASA NODE_73_length_44586_cov_41.4199 AUGUSTUS gene 158 5528 . + . ID=g10287;Name=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS mRNA 158 5528 . + . ID=g10287.t1;Parent=g10287;Name=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 158 304 . + . ID=g10287.t1.exon1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 158 304 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 557 646 . + . ID=g10287.t1.exon2;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 557 646 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 981 2105 . + . ID=g10287.t1.exon3;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 981 2105 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 2412 2972 . + . ID=g10287.t1.exon4;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 2412 2972 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 3206 3409 . + . ID=g10287.t1.exon5;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 3206 3409 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 3661 4470 . + . ID=g10287.t1.exon6;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 3661 4470 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 4622 4729 . + . ID=g10287.t1.exon7;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 4622 4729 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 5112 5528 . + . ID=g10287.t1.exon8;Parent=g10287.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 5112 5528 . + 0 ID=cds.g10287.t1;Parent=g10287.t1 #PROT g10287.t1 g10287 VFNEQFVSGMTEADIFAMVSQSHEFENIVVRDDEIAELDELLESACHMQVKGGVENAHGKINILLQGYISNAQMEGFSLISDSAYIAQNASRIMRALFEIAIRRSWPSMSSKLLMLCKAMDRRMWGWEHPLRQMSTLSPEIISKLEQRHLTIDKIRDLDAREVGQLITHQRMGETVRKCAMQFPSLSLSATIQPITRTVLRVQLTIVAEFTWSERVHGTSDPWWIWVEDPDNEHIYHHEYLLVTRKSSLEPQTLTFTIPIFEPLPTQYIVRAVSDRWLGAETSIPISFHHLILPDRHSPHTELLDLDPLPVSALNNAAYEALYPYGHFNPVQTQVFHTLYHTDKNVLLGAPTGSGKTLVAELAILRAFSQRGCKAVYIAPLKALVRERMEDWKERFERRLGKGVVELTGDVAPDMRAIERADLIVTTPEKWDGISRSWQNRKYVQAVSVIVIDEIHLLGDDRGPVLEVIVSRTNYISAHTDKRVRIVGLSTACANAGDLGDWLGITGAGLYNFKPSVRPVPLEVHISGFPGKHYCPRMATMNKPAYQAIKTHSPDKPALIFVSSRRQTRLTALDLIAMCAAESAPRQFLKMPEEQLDSILSGIRDGNLKLALSFGIGMHHAGLHERDRRTVEELFVNQKIQVLIATSTLAWGVNFPAHLVVIKGTEYFDGKQKRYVDFPITDVLQMMGRAGRPQYDQSGKAVVFVHDVKKHFYRKFLYEPFPVESSLPAVLADHLNAEVVAGTITSRQGAVDYLTWTYFYRRLVMNPTYYGMEDATPQSVTLCLSRMVDDALFVLERDGCLEIGRDGVSVTAKPLGRIASFYYLRHKSVGIFRHSISGISTVEGALKALCDASEFDELPVRHNEDELNLQMSKRLPWRIDESRVDSGNIKASLLMQAHMARAALPVTDYNADTKSALEQSARVVNAMVDVCAEEGVLAAALAVMRLAQALVQGRWPEDNPLLTLPNIDAASLGSFVSKENRAITSLVDLCRLARTNKHAVSEMAKKSLSHTQADEIINVLQTLPIVTMAPTTRSIVAADSDEEAAVRVDLAFERAARSSGKAVSPRYPRPLDESWWLVLSDDTTGELIALRRVAPGGGKQTATTLAFSPSSLAAKFPGRREFVLTLRAVSAVYVGLDAETTVNVRIETRASDH* # ORIGINAL: g10288.t1 original gene structure, not modified by PASA NODE_73_length_44586_cov_41.4199 AUGUSTUS gene 5640 9718 . - . ID=g10288;Name=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS mRNA 5640 9718 . - . ID=g10288.t1;Parent=g10288;Name=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 9577 9718 . - . ID=g10288.t1.exon1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 9577 9718 . - 0 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 9334 9476 . - . ID=g10288.t1.exon2;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 9334 9476 . - 2 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 8990 9195 . - . ID=g10288.t1.exon3;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 8990 9195 . - 0 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 8197 8676 . - . ID=g10288.t1.exon4;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 8197 8676 . - 1 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 7926 8027 . - . ID=g10288.t1.exon5;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 7926 8027 . - 1 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 7524 7791 . - . ID=g10288.t1.exon6;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 7524 7791 . - 1 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 6940 7368 . - . ID=g10288.t1.exon7;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 6940 7368 . - 0 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 6246 6827 . - . ID=g10288.t1.exon8;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 6246 6827 . - 0 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 5882 6021 . - . ID=g10288.t1.exon9;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 5882 6021 . - 0 ID=cds.g10288.t1;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 5640 5745 . - . ID=g10288.t1.exon10;Parent=g10288.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 5640 5745 . - 1 ID=cds.g10288.t1;Parent=g10288.t1 #PROT g10288.t1 g10288 MEEVTSAPGGVSPLATTDKNSRIESPTTRPALKAKSKKCKDKTAASQSGAEDATKKRPRVLWTKSDLQILLSGLYKFGKDFDKIRTKIQSKNKDQCRYFYYRMLRKIDKTLTTVECAPKLDSPLIELTAIISYLELTARGKYTSEAKRKSQRFGYCLAELISSGVKLKPIALRGFAEDVVPLAVPNGPSAAALNAGRGDGDFAGILLAASEEHGSGARGGLASGATSQSQSSTALSQVQQSGMGCVQDAVGVLGVTDGSGKAVNSNAPQRSPKRRQRKQTASAPKSNGNNGLDFGLVLGQGENGLLTPQQLQVIQLLLQKQGLCVQPIAANKLSLHLEPKNPLISCVLENAVHNPRIVLTFKSTKSLSSIIEYLLKKWVRVDTATGKEVQVASGIRLYPPGPAGNDHFGWGVDNAVGHSAFDIFQRLGCPKKFQLDYAFNIDAAAVAAYITPLLGPDFNIQHFAPHVAAVHSAPEVPPAAAPLLHAALQSGGDASVGIHMPASHRHVSPRTARSPGNRTVNIVNNDNSDINSNNISMINNKNNNNNKNDGNDVGIHNTVDGGRLMTDSVVSPAVRQRRNSSPRQPIASHDSFGGGVSLDGLGPLPAMEGESASAVSSNDDPFTAIGGQPSNALSLGFVNNPLVTMETGSLDGGIGQHIAFGRSQDYGGDVHLNIGNGQQHESNGARLGVDHADGLGLHGGDAGVLTGSAPQTDFDMEYGAWTHSDMNDGLGLGGHIDHFSVFESMRNPSLNFNKENIDPVPTVAVAKMPPPPTPQQQQRFVFDAVVDVSCDGFGSSYFARNGADLSTASPAKLISRGTPSAFSSALNGNSGSGQFTQPNPVAKRPRDDNSYEDSQQRTKRALSVR* # PASA_UPDATE: g10295.t1, single gene model update, valid-1, status:[pasa:asmbl_9133,status:12], valid-1 NODE_73_length_44586_cov_41.4199 . gene 35631 38821 . + . ID=g10295;Name=g10295.t1 NODE_73_length_44586_cov_41.4199 . mRNA 35631 38821 . + . ID=g10295.t1;Parent=g10295;Name=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 35631 36014 . + . ID=g10295.t1.exon1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 35631 36014 . + 0 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 36149 36639 . + . ID=g10295.t1.exon2;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 36149 36639 . + 0 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 36825 37420 . + . ID=g10295.t1.exon3;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 36825 37420 . + 1 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 37526 37707 . + . ID=g10295.t1.exon4;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 37526 37707 . + 2 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 37896 38024 . + . ID=g10295.t1.exon5;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 37896 38024 . + 0 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 38180 38416 . + . ID=g10295.t1.exon6;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 38180 38416 . + 0 ID=cds.g10295.t1;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . exon 38621 38821 . + . ID=g10295.t1.exon7;Parent=g10295.t1 NODE_73_length_44586_cov_41.4199 . CDS 38621 38821 . + 0 ID=cds.g10295.t1;Parent=g10295.t1 #PROT g10295.t1 g10295 MSTLKAGTIRGKHKHTSSGSSLAQATGSVSPSPNKRAADAQRDNVSTTSSTPSNSGTAEDEPFEGWLLKWTNYIKGYQKRWCVLKGGCLSYYRSKEEMEHTCRGTINLAGAMIYVEDKLNLTLSTGAQVYNLRANSEKERQTWISRLEAAKAKAAREQADLDGESDSEAEPSEEETDRVVAKGGATASEKIVNLRQTHELVAKQCSALQKRTVKIGDKALEAYPELRELQSDLTMFKSLALALVESCGQFIQEVEVEEKHLRKSVQVERRKRAKLLEAVETLAKEQLVLEKHANKLQVETGGNGSVVPNADDDDGEDEFFDATDDADPAAAGSRPQSSQSRRSTHRGSISVSPPDASTGGRQRRAAINFKPNKKYSLWAVMRNCIGKDLSKIPMPVFFNEPISFLQRLCEDLEYGELLNRAAQAKSSVERMAFVAAFTMSSYANTTTRTGKPFNPILGETYELDLRAEKGFRVITEQVSHHPPICALFAEGKDWTFLEDFSMANKFRGKYLQIEPLGVSRLIFKDTGEQYSWRKVTTTIHNIIVGKLWIDQHGEMDIINHTTGDKCHLKYFEYSYFSRDIARKVSGTVTDNNGMAHYELEGTWDDSMTAIKVSEPTAPATVMWKRSPLPPDHMEMYGFTYFACMLNEMEPNTAPTDSRLRPDQRLMENGLWDEANTEKQRVEEKQRVVRKQREASGEKWEPLWFQLKKDPLTGQDVHFYKGGYWEAKEKHDFKVCPDLW* # ORIGINAL: g10297.t1 original gene structure, not modified by PASA NODE_73_length_44586_cov_41.4199 AUGUSTUS gene 41412 44473 . + . ID=g10297;Name=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS mRNA 41412 44473 . + . ID=g10297.t1;Parent=g10297;Name=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 41412 41442 . + . ID=g10297.t1.exon1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 41412 41442 . + 0 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 41577 41699 . + . ID=g10297.t1.exon2;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 41577 41699 . + 2 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 41985 42131 . + . ID=g10297.t1.exon3;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 41985 42131 . + 2 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 42268 43112 . + . ID=g10297.t1.exon4;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 42268 43112 . + 2 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 43460 43662 . + . ID=g10297.t1.exon5;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 43460 43662 . + 0 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 43870 43996 . + . ID=g10297.t1.exon6;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 43870 43996 . + 1 ID=cds.g10297.t1;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 44171 44473 . + . ID=g10297.t1.exon7;Parent=g10297.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 44171 44473 . + 0 ID=cds.g10297.t1;Parent=g10297.t1 #PROT g10297.t1 g10297 MGQSSSRTQTVTPFGAAAPANDGSELSVLFVVSRKKLIAVAQRLSCKGGLNIEIWRGLGDRQLILKDFEGDSGFKYDCVVSEVESSKYLLDLLSSHIPVIVLDGANRSQEKASAFVLESVMSGAVDYVGGPIVPELLQVRVASAIEMRRLKEKEAAIVSRVESAQPGTEELGAADGPPLKVLLDVTGIQDTTASMDSESRDVARTPLGPITKGPVPPLRKSVTADRKVSEGSTRALELMETPLQQAWRLLKLAKEGTMTPDMYQKIMNVLEDLSSDPSSIRVRNVSGIVDHETSKWLQYEFGGDVSDAGPTGAKHVDRPISVNVFDADRMDELLRRLQRWDFNVWETSMEEMMDFAVFMFVHFGVLERYHVDVIVLRNFLEQVRMSYKSSNPYHNYLHAFDVAQMVFLILVDCNANQYLNFQDIFVLLIAAFGHDGQHPGLNNSYQIAARTDLALLYNDISVLENHHASHLFCIAEKPGCNVFAKLKPDEYNNVRSKVVSCILATDMSHHFSMVDMFSARLRRLTEAAFHKDTKENRQRQQKSKDDRRMLIKVLLHAADISNVARPPELSARWSHAVQEEFFCQVEPQTTQI* # ORIGINAL: g10292.t1 original gene structure, not modified by PASA NODE_73_length_44586_cov_41.4199 AUGUSTUS gene 24804 26231 . - . ID=g10292;Name=g10292.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS mRNA 24804 26231 . - . ID=g10292.t1;Parent=g10292;Name=g10292.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 24804 26231 . - . ID=g10292.t1.exon1;Parent=g10292.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 24804 26231 . - 0 ID=cds.g10292.t1;Parent=g10292.t1 #PROT g10292.t1 g10292 MHPSAFQSVRIIFFFVFLELTLPVLDYISDINVHQNARSDVNRAQRLTPPPSLGIANTSDPYYACTCTCVATSASTLNPLIAQNRVCQHNYMPSDGRMCGILMHAQLDSSSSCDVYAVMQLIAFTNAADGTTGTTLSGGSGQGTCTFALDFASVRTKMLDETSDLDRVTKAILGVLVISGVAHAFALFLRTKWTIADLRKGGGGGGGTHRRIEVDYAMHILQDGPQVVMSLLYLSLTGAPLGTNCLECIAGTRFHSTSSSLNPSASCTFQSTPGDNLAVLLSIVASGLVVLKTSLVIAWNQYRTSSLVGTEPTMWIAAGLVVHSLFLIGPICGAIYFDDNLIRMFGVGTSGERALLVITIISVFVHVVCICKLVYAALTGQMPAACVTVPPTSSSASIADITVSSEAEEREKRTETQETETRKQHPDAEANLAHFMTRYGAAAHANNNSNNNNKGKGKGQDASIEEENGFNMTSV* # ORIGINAL: g10296.t1 original gene structure, not modified by PASA NODE_73_length_44586_cov_41.4199 AUGUSTUS gene 39457 40209 . - . ID=g10296;Name=g10296.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS mRNA 39457 40209 . - . ID=g10296.t1;Parent=g10296;Name=g10296.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS exon 39457 40209 . - . ID=g10296.t1.exon1;Parent=g10296.t1 NODE_73_length_44586_cov_41.4199 AUGUSTUS CDS 39457 40209 . - 0 ID=cds.g10296.t1;Parent=g10296.t1 #PROT g10296.t1 g10296 MASMQSVDSILMELTGLKPEFGGVFDFSADMSAVPRTPCPDVDVINTSVKDLNRLLAEKGIDKAEVAEIRKVRRQEKNKTAAKRCREKKSRERVELESKTSEMQSELRTQMQLAQSYLAKVAEESNKRLAVERENARLTVANAQLTSQLAVAESKLAVAESKLAEERATFKSLRAEHELALERLQRENARTLQFVAGPFLTNAVSATTVHDALGGHYAGSCAKVGFELDFFSDSFEDIGTPMDNSVPQLP* # PASA_UPDATE: g10291.t1, single gene model update, valid-1, status:[pasa:asmbl_9136,status:3], valid-1 NODE_73_length_44586_cov_41.4199 . gene 21883 24415 . + . ID=g10291;Name=g10291.t1 NODE_73_length_44586_cov_41.4199 . mRNA 21883 24415 . + . ID=g10291.t1;Parent=g10291;Name=g10291.t1 NODE_73_length_44586_cov_41.4199 . five_prime_UTR 21883 22141 . + . ID=g10291.t1.utr5p1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . exon 21883 22361 . + . ID=g10291.t1.exon1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . CDS 22142 22361 . + 0 ID=cds.g10291.t1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . exon 22493 22915 . + . ID=g10291.t1.exon2;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . CDS 22493 22915 . + 2 ID=cds.g10291.t1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . exon 23230 23407 . + . ID=g10291.t1.exon3;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . CDS 23230 23407 . + 2 ID=cds.g10291.t1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . exon 23643 23778 . + . ID=g10291.t1.exon4;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . CDS 23643 23778 . + 1 ID=cds.g10291.t1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . exon 24006 24415 . + . ID=g10291.t1.exon5;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . CDS 24006 24179 . + 0 ID=cds.g10291.t1;Parent=g10291.t1 NODE_73_length_44586_cov_41.4199 . three_prime_UTR 24180 24415 . + . ID=g10291.t1.utr3p1;Parent=g10291.t1 #PROT g10291.t1 g10291 MSSGHAHAHARPAVPSVKGESVFSEVVAWLISIPLFTRVVMLLSVGTYVIDHLIERSVYDTCLWPSRIIQSREVYRLFTYPFVHANVAHLFFNLVAFVPMGVVTEKAVGTIQMGHLVNFFALIAAIIEVALSYVVARLGYPIFYNTCSVGLSGVIFSFVVLSTTRFSTSKRHSIFGMFTVSKKYYPWALLLIFQLIFPSASFIGHASGIIVGYIYVYGLLDFTHVHNRLVNFVETARLLKVITHRQGFVMQPANGLPVPKTLVKGRPTGYVDDGVFASVRRFFSNFFRRSQGIPATGGRTLSASSTTPLPLPMQIVVQKDVDSDAVIAALVGMGYNKDDAALASRGGATLEEALATLTKKNREDVPARQEAEAHTA* # ORIGINAL: g6421.t1 original gene structure, not modified by PASA NODE_3068_length_4410_cov_41.5163 AUGUSTUS gene 2089 4238 . + . ID=g6421;Name=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS mRNA 2089 4238 . + . ID=g6421.t1;Parent=g6421;Name=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS exon 2089 2300 . + . ID=g6421.t1.exon1;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS CDS 2089 2300 . + 0 ID=cds.g6421.t1;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS exon 2776 2914 . + . ID=g6421.t1.exon2;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS CDS 2776 2914 . + 1 ID=cds.g6421.t1;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS exon 3037 3187 . + . ID=g6421.t1.exon3;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS CDS 3037 3187 . + 0 ID=cds.g6421.t1;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS exon 3418 4238 . + . ID=g6421.t1.exon4;Parent=g6421.t1 NODE_3068_length_4410_cov_41.5163 AUGUSTUS CDS 3418 4238 . + 2 ID=cds.g6421.t1;Parent=g6421.t1 #PROT g6421.t1 g6421 MTLFVIAAVTSHFPQVEALYQARQIPTASAGPSLATSRESVVDSSINTAYVFEGQLAEERFGHSISLQEKSRTLVVGAPYASAASSGSGVDTSVERRGRVYIFPALLKSTANNFKEPPSTCMYRSHFGTAVVAGYGADGAGFVASAPTCTSGRNSVRVYAPADSTTTGVWGSACSSSTDVKGGTGLTVRFPTGTSNGKYAVATSIPRYRRNIKIQMQGASGIDGDLYLDDADCVRSNFTNCAGTPPYAFTSTQRYRLVGFYQGSRISGYSSASGLPVGVIGVPSVYGSFTYGNASGTSDFSLTNRLCAGCQNVRYADYENSNPCCHTTGTAPSPCNFDSMIYRTVRVSYSGHFCPLGGANPEESCFQVCLNGPLCNLKQGFVYMCNRPAIPQGTSKQIEWISIAGTTDRLFQLYVNSFYAGNGTASFAFTFSFEVRGVTF* # PASA_UPDATE: g11378.t1, single gene model update, valid-1, status:[pasa:asmbl_6364,status:12], valid-1 NODE_3655_length_3016_cov_36.5219 . gene 1402 2968 . + . ID=g11378;Name=g11378.t1 NODE_3655_length_3016_cov_36.5219 . mRNA 1402 2968 . + . ID=g11378.t1;Parent=g11378;Name=g11378.t1 NODE_3655_length_3016_cov_36.5219 . five_prime_UTR 1402 1443 . + . ID=g11378.t1.utr5p1;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . exon 1402 1510 . + . ID=g11378.t1.exon1;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . CDS 1444 1510 . + 0 ID=cds.g11378.t1;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . exon 1816 2006 . + . ID=g11378.t1.exon2;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . CDS 1816 2006 . + 2 ID=cds.g11378.t1;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . exon 2351 2481 . + . ID=g11378.t1.exon3;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . CDS 2351 2481 . + 0 ID=cds.g11378.t1;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . exon 2770 2968 . + . ID=g11378.t1.exon4;Parent=g11378.t1 NODE_3655_length_3016_cov_36.5219 . CDS 2770 2968 . + 1 ID=cds.g11378.t1;Parent=g11378.t1 #PROT g11378.t1 g11378 MATRNRVIFTGSVPADVHDMVTEVFGGNIPDKSRTHGHFELFPFNITNKYYNAEIDVGVNRAGTHVIDDALWDTVDGLVFVVNYADESGFEHVKQWNERMEDREPGIMILVAKYGDDAHRDTPHDKLIKKWCVEQGLEFIDWDAAKSRAAGGSAADVDSDEEVDEFARNEKYGAARIVEAFNANMWDNMVMADGT* # PASA_UPDATE: g11377.t1, single gene model update, valid-1, status:[pasa:asmbl_6365,status:12], valid-1 NODE_3655_length_3016_cov_36.5219 . gene 319 1057 . - . ID=g11377;Name=g11377.t1 NODE_3655_length_3016_cov_36.5219 . mRNA 319 1057 . - . ID=g11377.t1;Parent=g11377;Name=g11377.t1 NODE_3655_length_3016_cov_36.5219 . five_prime_UTR 936 1057 . - . ID=g11377.t1.utr5p1;Parent=g11377.t1 NODE_3655_length_3016_cov_36.5219 . exon 725 1057 . - . ID=g11377.t1.exon1;Parent=g11377.t1 NODE_3655_length_3016_cov_36.5219 . CDS 725 935 . - 0 ID=cds.g11377.t1;Parent=g11377.t1 NODE_3655_length_3016_cov_36.5219 . exon 319 452 . - . ID=g11377.t1.exon2;Parent=g11377.t1 NODE_3655_length_3016_cov_36.5219 . CDS 319 452 . - 2 ID=cds.g11377.t1;Parent=g11377.t1 #PROT g11377.t1 g11377 MERQDGRVGASGSSTGPPTVRRGIPPLAERIIYRNRMQPNHIFRDSGLYLPLLMPKRQGLLRLMTFVPAVVVTYYMVMVADWQEPNILTPVSALFLYAIVGLHGRVSTYAYISV* # ORIGINAL: g12282.t1 original gene structure, not modified by PASA NODE_61_length_47339_cov_42.2397 AUGUSTUS gene 23456 25094 . - . ID=g12282;Name=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS mRNA 23456 25094 . - . ID=g12282.t1;Parent=g12282;Name=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 24602 25094 . - . ID=g12282.t1.exon1;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 24602 25094 . - 0 ID=cds.g12282.t1;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 24257 24467 . - . ID=g12282.t1.exon2;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 24257 24467 . - 2 ID=cds.g12282.t1;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 23812 23984 . - . ID=g12282.t1.exon3;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 23812 23984 . - 1 ID=cds.g12282.t1;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 23456 23562 . - . ID=g12282.t1.exon4;Parent=g12282.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 23456 23562 . - 2 ID=cds.g12282.t1;Parent=g12282.t1 #PROT g12282.t1 g12282 MSSALKRMSASGASPAGSPAKPSSSSSATASSADPKRKASDAKPPSSSASATASPRRPSVTDASASSKTSSSSSSSKDRPSSAASSKDSRPSSAAEAPKRRPSESSEGKSEGKSEGKSGGLGRFLSKQAKADKGGKGPETNEADLVRKGEVTPDDVLGLTRPTSTYLCKPGANVYGIDFVEFKIRDLDRDSILFHVKKPADVPAYEPVDDNDNTGRFVRYNFSKDFLRLQNVGTTVVWVVGSKPITRFRMIERHYFKDRLLKSFDFDFGFCIPNSTNSCEHIYTLPELSEKEIKEMVEHEYETRSDSFYFVDGRLIMHNKADYAYNN* # PASA_UPDATE: g12284.t1, single gene model update, valid-1, status:[pasa:asmbl_8515,status:3], valid-1 NODE_61_length_47339_cov_42.2397 . gene 31446 35703 . + . ID=g12284;Name=g12284.t1 NODE_61_length_47339_cov_42.2397 . mRNA 31446 35703 . + . ID=g12284.t1;Parent=g12284;Name=g12284.t1 NODE_61_length_47339_cov_42.2397 . five_prime_UTR 31446 31844 . + . ID=g12284.t1.utr5p1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 31446 31978 . + . ID=g12284.t1.exon1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 31845 31978 . + 0 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 32570 32720 . + . ID=g12284.t1.exon2;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 32570 32720 . + 1 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 32967 33114 . + . ID=g12284.t1.exon3;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 32967 33114 . + 0 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 33288 33394 . + . ID=g12284.t1.exon4;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 33288 33394 . + 2 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 33680 33781 . + . ID=g12284.t1.exon5;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 33680 33781 . + 0 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 34001 34152 . + . ID=g12284.t1.exon6;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 34001 34152 . + 0 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 34404 34565 . + . ID=g12284.t1.exon7;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 34404 34565 . + 1 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 34990 35096 . + . ID=g12284.t1.exon8;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 34990 35096 . + 1 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . exon 35437 35703 . + . ID=g12284.t1.exon9;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . CDS 35437 35525 . + 2 ID=cds.g12284.t1;Parent=g12284.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 35526 35703 . + . ID=g12284.t1.utr3p1;Parent=g12284.t1 #PROT g12284.t1 g12284 MKLLNRAIERDNTGTVTLLPEETEDMWHAYNLISVGDRVRATTIRRVQTESNTGSVDSSRVRTTLTVQVENIEFDTAACALRVKGKNVEENQFVKLGAFHTIDLELNRKFSIAKDEWDIIAVERLETACDPRQSADLAAVVMQEGLANVCLVTASMTIVRARIEVNIPRKRRGHAQQHEKGLERFFEAVMQAIVRHVNFEIVKCCVIASPGFVKDQFLTYMFAQALKADVRAVLENKSKFVAVHSTSGHKHSLKELLSDETVLARLQDTKAAGEVRTLETFYNMLSNEPDRAYYGYDHVMRAAERLGVETLLISDELFRSQDVKTRKKYVALVEAVKNSNGDVKIFSSLHVSGEQLGQLSGVAAILRFPMPDIEDEEGDAHNA* # ORIGINAL: g12279.t1 original gene structure, not modified by PASA NODE_61_length_47339_cov_42.2397 AUGUSTUS gene 1595 4489 . - . ID=g12279;Name=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS mRNA 1595 4489 . - . ID=g12279.t1;Parent=g12279;Name=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 4407 4489 . - . ID=g12279.t1.exon1;Parent=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 4407 4489 . - 0 ID=cds.g12279.t1;Parent=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 2451 4296 . - . ID=g12279.t1.exon2;Parent=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 2451 4296 . - 1 ID=cds.g12279.t1;Parent=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 1595 2227 . - . ID=g12279.t1.exon3;Parent=g12279.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 1595 2227 . - 0 ID=cds.g12279.t1;Parent=g12279.t1 #PROT g12279.t1 g12279 MTTTIKSRRETSLQLRIGEGKSLPLKEGSGTCNPYCLIKIDKEEVARSSTQWTTQTPQWGEDYHMNLPHNFEEIVVYVLDEDFVTIDEFIGKVTISRESLERVPGLEQWYPLCPVEAEVKVRGEVHLDVVRVTTSSGKERLRVHVIEAKGLPKKEGGVAPDPVVCLSLVDAATGSTVEKQTDVKKKSVFPRWDQKFDFETSPSGGESSSQLTVTIHDGVGGDVIGAVTMPVSDFDLGTRSTDVWCALFPKSTDADPRTNLGSIRLKIKFTQDLILPPAFYEPLMQLLTQSIASMETIASGVIGLLEEVMTDREDVARSLVKIFDARGRLPDYMDAVTSLDIRNTVDPNTLFRGNSLATKSFDQLMKIYGRDYLKSTLQPIVSDVFESKRSCEIDPAKATKADNVDANAAILKEYVERAMDAIFTSANDCPMVMRRAFKILQHRVQEKFGNQESASKDIRYIAVSGFLFLRFFVPAILAPKHHGMRDQHADAQTLRTLTLVGKTLQALGNFGKEVGKSKEEYMKQFHTMVQDKMPRLKAFIDAVVTVADEEKKAVSQQAQDADLDLPGPSGGLSDSSAIKEGTLLKRSKGSFGRKTFVRRQFRMTPMALVCLDKGEVRARIRREDIVAVEKVDETAFKRKFAMQVVSSNRLHSDNVLYVCAVDEKDQREWTSALRWLCGSNPTMRRTFHAGAFVKGRWTCCRSIEKGAIGCEKAHPYAVSARFMVDTNVVHVEKELQHIFRQLLQGREKLSKSYGGDGSAAGARSGPPPAPSSGSSFNLLVPSAATTGAAEGDHAGDGFGDPRGRTGSAISVNSVAAMDPELQRLRRVAAKELLAVMDALESALKNEAQSSSTC* # PASA_UPDATE: g12285.t1, single gene model update, valid-1, status:[pasa:asmbl_8512,status:12], valid-1 NODE_61_length_47339_cov_42.2397 . gene 36010 37194 . - . ID=g12285;Name=g12285.t1 NODE_61_length_47339_cov_42.2397 . mRNA 36010 37194 . - . ID=g12285.t1;Parent=g12285;Name=g12285.t1 NODE_61_length_47339_cov_42.2397 . five_prime_UTR 37128 37194 . - . ID=g12285.t1.utr5p1;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . exon 37019 37194 . - . ID=g12285.t1.exon1;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . CDS 37019 37127 . - 0 ID=cds.g12285.t1;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . exon 36770 36879 . - . ID=g12285.t1.exon2;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . CDS 36770 36879 . - 2 ID=cds.g12285.t1;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . exon 36010 36454 . - . ID=g12285.t1.exon3;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . CDS 36140 36454 . - 0 ID=cds.g12285.t1;Parent=g12285.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 36010 36139 . - . ID=g12285.t1.utr3p1;Parent=g12285.t1 #PROT g12285.t1 g12285 MARAVGELREALACLLDPLASFEDAGSDVGNKMHANDVDARVVDFLQSAKALSLFFTAARLRVLADPAVAYAEEIERKKESIARKDALIEQHRKLASAWTERIEALRHRAETVLNSDFVVTPRQNGDDRVSGDDAQSGSESETALAVNMEGVDKGSSDDAPVCVVVGDGVASDPMIE* # PASA_UPDATE: g12280.t1, single gene model update, valid-1, status:[pasa:asmbl_8513,status:12], valid-1 NODE_61_length_47339_cov_42.2397 . gene 5360 14492 . + . ID=g12280;Name=g12280.t1 NODE_61_length_47339_cov_42.2397 . mRNA 5360 14492 . + . ID=g12280.t1;Parent=g12280;Name=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 5360 5540 . + . ID=g12280.t1.exon1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 5360 5540 . + 0 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 5686 5860 . + . ID=g12280.t1.exon2;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 5686 5860 . + 2 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 6062 10400 . + . ID=g12280.t1.exon3;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 6062 10400 . + 1 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 10542 11867 . + . ID=g12280.t1.exon4;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 10542 11867 . + 0 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 12081 14003 . + . ID=g12280.t1.exon5;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 12081 14003 . + 0 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . exon 14267 14492 . + . ID=g12280.t1.exon6;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . CDS 14267 14416 . + 0 ID=cds.g12280.t1;Parent=g12280.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 14417 14492 . + . ID=g12280.t1.utr3p1;Parent=g12280.t1 #PROT g12280.t1 g12280 MGSETPQEAGSDVGSTPSAEAPDRLVEVVRALFNDVSTSSLEHRRHLFAGMLVPLVMERDQLPDGAVKTIVATLFLTLYRYTDRPSRKYVEDALSALAKKHSAQTVKYFVPALAKESAKATSVASLVLLRWSCAVAANAESANTSDQWQLLVSTQASLIAAASSAERPSVAKSAIDRFARCLATSPASLFDAYAAAVVAAEPKVSSLALAAAVCAAARRLPKPAEARRKAFVDSQRKSVADLYGKGALCAKLAIAPSVLAAMEPLVALADRETFVSVILLAAEKGMLRNPETALGALASLVNQLSCDVSPVASKTVKMFTPHLKANGEAARADAVRGIAGIAAHCSDGSVTEQIIRDLLAVLNGSEGKIGTWEHRAAVVSAIGLVSRAQVSPSSLAPAATAAIAGLALFGQSEAHEGVGKAVTVALTSWSTKLVSFPVSLVAPLKEALSKTAKPHFRRGVLDAIEALVRSDDIARSVGSTADLVDALVGVVDRARATQPAQAMHFGELSAAASILLRLAATEQKAETTLSANKAFWAAVVDADAKTRVLLSAKLQASATEADLVALASVAGKLLVNFSSRIDAVPSGASARPLWFGTVVALASHSSRAVRNAGQAAVTALVKSTASLVAMSALTSALRTHVEQVALTQQQQQAQRAKEKKDESAKEADACQVKRHIATAIGGCGLAIATPPTKGDSKYATETVLSLFLVLHHPIVEVQSLSWWTSAVAQMKMDPSSLIGDRIIDLALGADGLGSDEAGRRRSAIAALRTLLRINLESSLRALSPRMTAGIDPSAVAGIGEYECNVAQTAEGTLYDTAVLGDAHRLDASASLANKKRESKVYSYEDELWDAQIRAEMEAKQGKKPELQLTKKQKETMDAQLAKESAIRKRVHAADRTVGRAMMVVTVAAEECAAHDDFHHEGPMDAHAPALVALLIPLLSSALVGGRAVETLASVGSALTHRLRRLAPSVAHLAARLVGAASAKDPAWSEEPLKTMAARIVGRLRALFAEEGHSHALSPGSFAFVFPVLRAVIAAPEMQPVHEAAFATVAAHCHLGSSPFVPRAGVIASLIGLIAANARLQKPAHAALVGLCQSGSESLGPVEGTALIAGISHADVAVRSACVDALHFVPLDDSSDVIVVGVWLACHDGDAPTAERAKAVWAKHGLKLAARHTELLVDKTLSPDETVRIAAGLALAGALKTHPDALGAAVARLVQRYDDKLRVPPPERDSVGNIIHKPFVDPWQARTGVAHALGAMAPLMKSTELSQLFQFLIGGALGDANEDVRVKMLAAGTAAIDAHGAAGVQTVLPVLERYIDSPAPPTQTHDRIRESVVILLGSVARHLQATDPKVPPIFKRLLQALGTPSQPVQEAVARCLPPLIPAVKESAAETVRSLMLKLLDGDSYGVRRGAAYGLAGVVKGLGILALKQFEIMAKLQEAIEDKKVAQHREGALMAFETLCTTLGRLFEPYIIHVLPHLLVCFGDGNKDVRGATEETSKAIMSQLSGHGVKLVLPSLLNALEDKAWRTKQGSAELLGAMAYCAPKQLSSCLPMIVPRLIEVLSDSHAKVQDAGNQALKQIGAVIRNPEIQALVTLLLDALRDPNNRTQKALVALIETAFIHFIDVPSLALIMPILQRALKERSTDTKKMAAQIIGNMSSLTDQKDLAPYLPFLLPGLKEVLLDPIPEVRGVAAKALGTMIRGIGEDAMGDLVPWLLETLRSENSGVDRAGAAQGLSEVLSALGSGKLESMMPDFVANTRTGRPHVREGYLMLFVYMPGVFGDAFLAYIPPIIPSILKGLADEAEYVRDAALKAGQMIISHYADTSVALLLPELEIGLFDDSWRIRQSSVQLLGDLLYKVSGLSGKKTTVGHDDDNFGTEEARQAILMTLGDERRNRVLAGLYMARSDVSPIVRQASLHVWKTVVTNTARTLREILVTLMGLLLGSLASTSYDRRQVAARTLGDLVRKLGERVLPDIIPMLEKGLESAESDRRQGVCVGFSEIMESTSREQIIQYVDKIMPVVRRALCDPLPQVREAAAQTFDRLHRTVGPATIDEIIPDLLGSLADPAVSSFALDGLRQVMAVKSHVVLPFLVPKLISPPITAFNARALAALTSVAGLALNKHLSQIVPALASAIRTAKTTEEHDEILASARQLVLSVDNEQGTRLLLSDLLTLAKDDDAGMRKAACELVHAFCDETKSDLITNVISILESMVRRFSDMDSGVVEAAWRATDAISRRVSKEELSQHIAQIRRMVHYAVEDAIAAGLPGTELPGFNIPKGVAPMLPGLLHGLTNGTQETRESAAKGLGEIIRLTRPEALKPFVIQITGPLIRVIGDKWSDAVKSAILETLTLLLERVGPMVKPFVPQLQTSFVKSLNDGSKDVRAKAAAALGLLITLQARVDPLITELASSSKTTTGAVQETMLRALANVLLRAGKDASEATRATVTQAVLSVLGDNDESVRVAAAACLGTLSLFAPDAEIAALIKQTLLPEPPTALPERHGRALALSALALESPQKLIALGGPSEVAARASSFAVDERVPIAHAGVQACGRLVKFGLLNAGTLDAPAIEVMVRSIATACAEGSTDTRFDALRAIKSIAKSTTSALFCAKYGGIVLPVAVSYVRDKNTKVKLAAGRTLAHVLKVADGPSLVQNCTKLVGADTASKIQEYYTKVLSYRVNDESDNDDLLGVDGGDSVGEIAE* # PASA_UPDATE: g12287.t1, single gene model update, valid-1, status:[pasa:asmbl_8521,status:12], valid-1 NODE_61_length_47339_cov_42.2397 . gene 40747 44237 . + . ID=g12287;Name=g12287.t1 NODE_61_length_47339_cov_42.2397 . mRNA 40747 44237 . + . ID=g12287.t1;Parent=g12287;Name=g12287.t1 NODE_61_length_47339_cov_42.2397 . exon 40747 41356 . + . ID=g12287.t1.exon1;Parent=g12287.t1 NODE_61_length_47339_cov_42.2397 . CDS 40747 41356 . + 0 ID=cds.g12287.t1;Parent=g12287.t1 NODE_61_length_47339_cov_42.2397 . exon 41590 44237 . + . ID=g12287.t1.exon2;Parent=g12287.t1 NODE_61_length_47339_cov_42.2397 . CDS 41590 44237 . + 2 ID=cds.g12287.t1;Parent=g12287.t1 #PROT g12287.t1 g12287 MDPNTNSGNGVASDHRYSDGDAAPSESANAENYDNISAYDSPPQSPVRRPVELHGDVLKDALDYCDREPIRMPGCVQPFGAVVVVHARTMRVVAASTNLEGLVGVPLASLRGKTFSESFGAQAASVLKKFRASPMLHHLHEQPFKTPCADPRPVAFSMHKQGKHLLVEFENVVTFDSSFDINRNMRQSLERIIATETVDSVARVLSEEMRRLAGYDRIMVYRFDDEYNGQVIAESRNEAVYGSYMGLRFPAADIPRQARQLYLRNWLRCVMDVDAVPSAVVATDNIRGEPNEWPLDMTDLHCRAVSPVHLQYLRNMAVRASMSLSIVHNNKLWGLVACHHTKPISVPIRMRSTFELMAVAFSAHIGRLQETEYQRHCLSSEHTMRRLLAHNPAAKITDLLRFVEANAPDLMGMFRADGIALVAATNLGPLFSVGYLPRVTPGMWYWLEAACGWDGSRIAWTNCLSRCAVDTPDVVGGVLAMPVPNNHYLLAFRRGVVQTANWGGATPETVKMMPMRKASEEVMGPRVSFEMWRVEYRDRSLPWSTIELREAEALMTFLRASCEGTWQPEKVAEAAAVAVKEEVGAGPIYTGAQSASHALSVVEGCLALLRGSATREQSSIKEASDLQGLVEGMLDLSKADADLLTIEAKPFSIHEIAGACLDASPAGIRSSLRWDGGVWAVGDGMVFHRIVASMMRATLDGAKGDAHRVAVAVTTSPCQAPDLPATNNNSRSAVFASSGTHGVSGPLFSAEHMYGGTHVPLSSAKRAADAQASNTSAPAPAAVGVEQRPVVVVKEARGVRVKVTTSCASPTIDSDGVESLFEPFSLSITGEDISLAVARKLAVAMRGQLEGRIASSTDDPASAPEMILEFEVVLPEYEAGDDGSTISGIGRYSDSSRSSFASEHPPPAPKESTGIPSLEHMRLLLLDADPISVHVFRILAANFGVRAIEAVSAGVDAMRVLGIGSPSCGKQADVVFLDPRAPGAHEALAMIASASCVPVVVMVHGGAKPTDLSNWIALGADSCIATPCHFDELRETLVRFRPQVLGERLGSSSAAPAELASAPIPDAADRDDSGEPQQRKKPRTK* # ORIGINAL: g12288.t1 original gene structure, not modified by PASA NODE_61_length_47339_cov_42.2397 AUGUSTUS gene 45136 46318 . - . ID=g12288;Name=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS mRNA 45136 46318 . - . ID=g12288.t1;Parent=g12288;Name=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 46182 46318 . - . ID=g12288.t1.exon1;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 46182 46318 . - 0 ID=cds.g12288.t1;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 45863 45938 . - . ID=g12288.t1.exon2;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 45863 45938 . - 1 ID=cds.g12288.t1;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 45516 45640 . - . ID=g12288.t1.exon3;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 45516 45640 . - 0 ID=cds.g12288.t1;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS exon 45136 45283 . - . ID=g12288.t1.exon4;Parent=g12288.t1 NODE_61_length_47339_cov_42.2397 AUGUSTUS CDS 45136 45283 . - 1 ID=cds.g12288.t1;Parent=g12288.t1 #PROT g12288.t1 g12288 MTLFQLMTMDDWFFMYSDNADEDTNNAHIFVYLVSFIVLCTFVLINLMVAVIVDNLQNAQDKQKSKRVLKRSVMTEVAESIVRPEVHSTRYHNRDNTQMDDRLFFPPLIVKQREKELLRHYGVLLAAVDYAGDQMNAQRVAIDKLIELCALDLKKKEEEIV* # PASA_UPDATE: g12281.t1, single gene model update, valid-1, status:[pasa:asmbl_8518,status:12], valid-1 NODE_61_length_47339_cov_42.2397 . gene 15764 22745 . + . ID=g12281;Name=g12281.t1 NODE_61_length_47339_cov_42.2397 . mRNA 15764 22745 . + . ID=g12281.t1;Parent=g12281;Name=g12281.t1 NODE_61_length_47339_cov_42.2397 . exon 15764 18172 . + . ID=g12281.t1.exon1;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . CDS 15764 18172 . + 0 ID=cds.g12281.t1;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . exon 18368 18471 . + . ID=g12281.t1.exon2;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . CDS 18368 18471 . + 0 ID=cds.g12281.t1;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . exon 18816 18870 . + . ID=g12281.t1.exon3;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . CDS 18816 18870 . + 1 ID=cds.g12281.t1;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . exon 19043 22745 . + . ID=g12281.t1.exon4;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . CDS 19043 22564 . + 0 ID=cds.g12281.t1;Parent=g12281.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 22565 22745 . + . ID=g12281.t1.utr3p1;Parent=g12281.t1 #PROT g12281.t1 g12281 MHVVPLPSAAVHARSGVMSSAEAEAATDAEHIERGMNAQSHEQQHLLSHVLLHEANESATVDAPCEDTAADFQPPETIPQQSPQQIPQDGIFREISDADANRSDANVHAVNSAVALSPPPHTPHVTYPLEVSATSNVAYPQHSSPQSPPRADDRLGCRESLGDTSLSENDEKQADDGQSGALNKSDHADSHKTVPPELQVTSGRAPRASRRRGNASERSQDARSAKTDADADADADAEALAAAVAAAEEDLASANSRRSSNRQRGLAAQYVEPPPELARTSPPPPKGKPSLLRAMQVDVAAASREGRALQLSASNGEKGFNVPPPVPLLSDALTSGMSFEQWEEAIAKEIYGSVRALPAEAQQSAGKRENNSASRAQLQDDLGIAEVPPTATATAASAATATATATVTATRQARFHPTPVVTPFVNERAALSAKKALEPEVDPSTYYNHDWCDACRVGGALICCEACPAAFHPYCAEPPVDPDNMPEGEWICRQCRFAREMDDGSVVRPVLRRGAPPPKQSQSQSQSQAGGTAGATPAVPRPKTGEFRKVLECQSDMASHPGICASAFAPLLKSIAYANPLVFKLPDDFSPVIRELTMQPKRALRTTTSAAALASGAQSQQQQQQSQQSQQQSQQQSQMGSRAALAAGALVSGSQQDALSTASPAPDAGSRRSGDRKGSRRADRGPAGLNGSNGGKGSRDGHRAARNARVAAAAAAVAAMDLADVASNDDQSPFVALPDSDVTVVREPDRCYACDCLEGTPRGKKLASCAFCPLFFHLDCLDPPLVSVPKRNWMCPNHAEHYLPSSDRLSMRQMPNTETLEDEELTFAEDTFADAVQMSVPDLDFLADMVCSLKPLQSFRRKAQLLLLSASSLDSGAPSVVDADDADEYYRRLQGVPMAISLLDGKEAPDDFVPMFAADAKADLTRQDSNAPSTDDAKTIAPAPVADTAQVTKQDGSDGRRRWSRTGTADGSNSANASADSNATQTSGRRAPRSAQKDRGKQPTDQASSEQDSTSKGNDADGNDNNTASLNNKGRSRKRNNATEDQDQTASAPGGGRAGRRPPAVEQASSPAVSQALHHTKRRSNAERVREGSAATVDTPRAPPTSRKRKRREGDDLPEVGADKGTQTSPESQQRRVIVAVATESTNTPPPAKRRAIPKREGASQLTNVAPAIPGAPTVSSPIGDKPVSRTQIVDVPALKRAPRQRMTIATEPGATTTKPGRGGRVGATRRARDASATTPAPAAQSQPAQSQESTAASEDGVAPPSASSEDSLTVSEKGGERADAVPDESAAIPDPVVAGRKIKPRRKPIAATTNSAAVDVAPVGPSSDHHLRPEPFPTNSDHVAGADATEHGAVVSTVSEAVEPMSTHPSGQDMPTATGDDSAAAPAVASPNAKELSGAKTCSPEAVPRSSSANSTGSASPPETGGASALSLHAPEAGAASPAKRSARVQARGRDGTVGPCGKQFHGHWCTCQTDDDAPAQGRQRQQDDAPAIAKRKRSVSKDIPEDVATPNDSAPVAVEQQSVVAPAKDKAPVAKRVKINVSQLTANVDTDAPADHAIISVEKGKMPHVRRKKRNQDTVILDSPSSVQSKKAARKQKRAARKRDAEGQSVEEGHTGARISLLVLTGPKKSPPETMATKAETPAGSATIVSAVAPKKLVKRAQKPRASVVGGVLKIRTTAANADGGDGAVRVAEAGDSGLDGRPVKQRKRKRKETSGDDGAVPQAKRRATTAKAKNLAGAGAGAGAAGGTAAAVSVDPGPAGGAVAQAKLKNRLSLKLRPAAAASSVVPPVKVKPQWQRRAILPITTGDAAPALAADGNLLGAVNTVGGPTATATTAIAPVLHVADSAADDGFAASTMPALNTGRTLSDVCARVGVGATDYHPSPVPLPVHATESVAMSLVPNSLASALPASSEADMDGGTVIRASFVSEGNSHGEEVSRHAVVANSDAISDSHATQNLALPVPFVLCPPTLQPAMPASGMSGIGNVSLGVDGSAATAAEGGNGGSSLMGSTGSVCAVRLTLPSQKAN* # PASA_UPDATE: g12283.t1, single gene model update, valid-1, status:[pasa:asmbl_8514,status:3], valid-1 NODE_61_length_47339_cov_42.2397 . gene 27473 31044 . + . ID=g12283;Name=g12283.t1 NODE_61_length_47339_cov_42.2397 . mRNA 27473 31044 . + . ID=g12283.t1;Parent=g12283;Name=g12283.t1 NODE_61_length_47339_cov_42.2397 . five_prime_UTR 27473 27624 . + . ID=g12283.t1.utr5p1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . five_prime_UTR 27946 28166 . + . ID=g12283.t1.utr5p2;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 27473 27624 . + . ID=g12283.t1.exon1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 27946 28338 . + . ID=g12283.t1.exon2;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . CDS 28167 28338 . + 0 ID=cds.g12283.t1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 28488 29203 . + . ID=g12283.t1.exon3;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . CDS 28488 29203 . + 2 ID=cds.g12283.t1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 29358 29506 . + . ID=g12283.t1.exon4;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . CDS 29358 29506 . + 0 ID=cds.g12283.t1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 29746 29895 . + . ID=g12283.t1.exon5;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . CDS 29746 29895 . + 1 ID=cds.g12283.t1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . exon 30147 31044 . + . ID=g12283.t1.exon6;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . CDS 30147 30432 . + 1 ID=cds.g12283.t1;Parent=g12283.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 30433 31044 . + . ID=g12283.t1.utr3p1;Parent=g12283.t1 #PROT g12283.t1 g12283 MEYNTFGPLVSEFDRWDSDRQVIFVNTLLNRMAQAQLVQIDETVQKYLKKDFVTMLPVELAWKILSFLDGPSLCAAEEVCRAWRCVVSTGDAWRSLCIANDAEVPPPTFLTQTPNPRQDGHMSAWQESHVNPSNLPFRARSVDWKRRFALEYTSERNWRCGRYRIAHKLPGESGGVYCVQYDDCYLVSGHRDCSIRVWDLRAITVVHRCEGHTGSVLCLQFDREKIISGSSDGTIRVWAFDDTRTIAILPDHKQPVLHLRFRGETLVTCSKDRNIFVWDISDINNIRHRHVLCGHSAAVNAVDFNDTVIVSASGDRSLKVWNINNGQCLRTLEGHSRGIACINMHGNRVVSGSSDHDIRVWDWTTGECVHRLQGHSSLVRCIRYDGKFIVSGSYDRSIKVWDAKTFKCLHTFLEHNHRVFRIQFDRSTMVSSSQDDNILIWDFRDDVQGGGGGGEPADKSGNAAGNSGPMNGGVVDAGDVGGSDAMQVDP* # PASA_UPDATE: g12286.t1, single gene model update, valid-1, status:[pasa:asmbl_8516,status:3], valid-1 NODE_61_length_47339_cov_42.2397 . gene 37421 39559 . + . ID=g12286;Name=g12286.t1 NODE_61_length_47339_cov_42.2397 . mRNA 37421 39559 . + . ID=g12286.t1;Parent=g12286;Name=g12286.t1 NODE_61_length_47339_cov_42.2397 . five_prime_UTR 37421 37485 . + . ID=g12286.t1.utr5p1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . exon 37421 37487 . + . ID=g12286.t1.exon1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . CDS 37486 37487 . + 0 ID=cds.g12286.t1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . exon 37639 37711 . + . ID=g12286.t1.exon2;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . CDS 37639 37711 . + 1 ID=cds.g12286.t1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . exon 37853 37987 . + . ID=g12286.t1.exon3;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . CDS 37853 37987 . + 0 ID=cds.g12286.t1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . exon 38122 38203 . + . ID=g12286.t1.exon4;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . CDS 38122 38203 . + 0 ID=cds.g12286.t1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . exon 38349 39559 . + . ID=g12286.t1.exon5;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . CDS 38349 38839 . + 2 ID=cds.g12286.t1;Parent=g12286.t1 NODE_61_length_47339_cov_42.2397 . three_prime_UTR 38840 39559 . + . ID=g12286.t1.utr3p1;Parent=g12286.t1 #PROT g12286.t1 g12286 MSEFWKSNPRKFCEFCKVWIADNKPSIQIHENGKMHKDNVDKNLRDVRKKSALAKKTEDNVAKQLKAIEKAAMAAYEKDLESNPQLAEDSSVKRQQQTVPSATAEVKAISATSAPKQSPPSAQEAPVLTAGETTANKETEGIVQEIERKPAPKDDNTGYGGWTSVSVVAKTAAVEDSDSRNWRSNRTAEADTPQTANGGGWTNSVAPVVDDEPPVKFTEKETPLLAPSASSTVSGDEIGFKKRKAASQKSAVIRKKPAIE* # PASA_UPDATE: g4939.t1, single gene model update, valid-1, status:[pasa:asmbl_736,status:3], valid-1 NODE_1196_length_13187_cov_41.0963 . gene 5811 7907 . + . ID=g4939;Name=g4939.t1 NODE_1196_length_13187_cov_41.0963 . mRNA 5811 7907 . + . ID=g4939.t1;Parent=g4939;Name=g4939.t1 NODE_1196_length_13187_cov_41.0963 . five_prime_UTR 5811 5863 . + . ID=g4939.t1.utr5p1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 5811 5887 . + . ID=g4939.t1.exon1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 5864 5887 . + 0 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 5997 6147 . + . ID=g4939.t1.exon2;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 5997 6147 . + 0 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 6483 6576 . + . ID=g4939.t1.exon3;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 6483 6576 . + 2 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 6721 6854 . + . ID=g4939.t1.exon4;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 6721 6854 . + 1 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 7125 7327 . + . ID=g4939.t1.exon5;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 7125 7327 . + 2 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . exon 7553 7907 . + . ID=g4939.t1.exon6;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . CDS 7553 7582 . + 0 ID=cds.g4939.t1;Parent=g4939.t1 NODE_1196_length_13187_cov_41.0963 . three_prime_UTR 7583 7907 . + . ID=g4939.t1.utr3p1;Parent=g4939.t1 #PROT g4939.t1 g4939 MFKLDKNRTFRPAKKFEKDSLRYKLLKQTKASLGVGEQLRNIVRLPQGEDLNEWLAVHVVDFFNRINLIYGTVGEFCDAKSCPTMSAGKQYEYHWMDGEKYKKPTSMPASQYVILLMEWIEHQVNDEDIFPSKVGVAFPKTFLPTVKNIFKRLFRVFAHVYFHHFDKLQSIGAEAHVNTCYKHFYLFVTEFQLIEPKELEPLKELNAHYEK* # PASA_UPDATE: g4941.t1, single gene model update, valid-1, status:[pasa:asmbl_737,status:3], valid-1 NODE_1196_length_13187_cov_41.0963 . gene 8764 11862 . + . ID=g4941;Name=g4941.t1 NODE_1196_length_13187_cov_41.0963 . mRNA 8764 11862 . + . ID=g4941.t1;Parent=g4941;Name=g4941.t1 NODE_1196_length_13187_cov_41.0963 . five_prime_UTR 8764 8883 . + . ID=g4941.t1.utr5p1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 8764 9053 . + . ID=g4941.t1.exon1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 8884 9053 . + 0 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 9453 9539 . + . ID=g4941.t1.exon2;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 9453 9539 . + 1 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 9702 9861 . + . ID=g4941.t1.exon3;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 9702 9861 . + 1 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 10061 10229 . + . ID=g4941.t1.exon4;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 10061 10229 . + 0 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 10445 10644 . + . ID=g4941.t1.exon5;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 10445 10644 . + 2 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 10948 11165 . + . ID=g4941.t1.exon6;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 10948 11165 . + 0 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . exon 11511 11862 . + . ID=g4941.t1.exon7;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . CDS 11511 11694 . + 1 ID=cds.g4941.t1;Parent=g4941.t1 NODE_1196_length_13187_cov_41.0963 . three_prime_UTR 11695 11862 . + . ID=g4941.t1.utr3p1;Parent=g4941.t1 #PROT g4941.t1 g4941 MATDAPCVRRTGFVWSERYMWHDTGTAMGLIPAGIREGHGLYCQPYRHFENAETKRRFYSLIDVCGLLDKTIPVKARLADVSEVARYHTNLYIENVKQLSDGAGGDAGECAPVGAGSFEIALLAVGGAIEATDAVIRGDISNAYVLCRPPGHHAESNIGRGFCLFNNIALAALHAIESRGINRVAIIDWDVHHGNGTEKAFYDRDDVLFVSLHQDNLFPMNSGQIECVGEGAGANFNINVPLPPGSGIAVYKAAFERVVLRAVRSFNPELVLVSCGFDAAAYDPLSHQMLPSDSFGWMAESLLTLTEAMPACSGRVVLLHEGGYSAEYSPFCGVRVIEALTGTKTNVVDPFQLEIEAYAYQNDILPHQELVIHKAETIVGKMEAFIADGCGVHSA* # ORIGINAL: g4938.t1 original gene structure, not modified by PASA NODE_1196_length_13187_cov_41.0963 AUGUSTUS gene 477 5453 . + . ID=g4938;Name=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS mRNA 477 5453 . + . ID=g4938.t1;Parent=g4938;Name=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 477 752 . + . ID=g4938.t1.exon1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 477 752 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 842 1073 . + . ID=g4938.t1.exon2;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 842 1073 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 1262 1473 . + . ID=g4938.t1.exon3;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 1262 1473 . + 2 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 1651 2361 . + . ID=g4938.t1.exon4;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 1651 2361 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 2515 2651 . + . ID=g4938.t1.exon5;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 2515 2651 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 2754 2886 . + . ID=g4938.t1.exon6;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 2754 2886 . + 1 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 3021 3131 . + . ID=g4938.t1.exon7;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 3021 3131 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 3254 3504 . + . ID=g4938.t1.exon8;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 3254 3504 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 3643 3766 . + . ID=g4938.t1.exon9;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 3643 3766 . + 1 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 4093 4203 . + . ID=g4938.t1.exon10;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 4093 4203 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 4320 4501 . + . ID=g4938.t1.exon11;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 4320 4501 . + 0 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 4757 4998 . + . ID=g4938.t1.exon12;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 4757 4998 . + 1 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 5116 5214 . + . ID=g4938.t1.exon13;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 5116 5214 . + 2 ID=cds.g4938.t1;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 5323 5453 . + . ID=g4938.t1.exon14;Parent=g4938.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 5323 5453 . + 2 ID=cds.g4938.t1;Parent=g4938.t1 #PROT g4938.t1 g4938 MDWRTALATAIRHRQAVPVTPVSVQTPDIAIYSALAASAGHAAAFQSTHAIMAHQHQQQQVQLQQQQFQMHLQLHQQQQAALALETASTVDMVDFDTALGDSSADFLLGLDEFMGGGEICGDSNAISSSFPFDGRAVGDVGAHSGAADSSSGRGSPFSAGSDRVPSGVSSVGSPQLLSGQRGSSYSPTDPSSNVAPDQRRSSHIAAEQKRRNNIKEGFNELRDVVPACRPHDSKAVILKKAGDYILYLKKKKAERGEIDEGDELRRRMKFAIEYIACLKRQKGVLVEQIGRAKTELSRASRALAQCTCTPDVADVSAKLSATVDAITTAASGSGDSADLDSRIAARPTTCIGAAAAAEPLVCARTESVEAYESDSMPDMASRVVQDSLVPADGPTALAAKTAMSPIVRMQTQEVLPSGMKLLVIMVMFVFAVMNPPEQPKNERGTMIGMRQLAEYFEGTTTTTVAAVIASYFTYIVSIFLRIVCFCLAAFLSWRYILEAPSSVQPNSRRFNLALEERRKGTKRLIAARCADTAERHFINALTYFDCSAPPSSRLGLAIALCVEIFVQITHMMKWGQKLARYSVTRSGAEVTTEECAKTYLSLNQLYFANATDVPLEGWVCLLKAINFAESTEPSQTLAKAYSILAFQLAFRLGGGRITRRPLGFLARMYRRLAAQTGMQTKVSEQTRGYISLLDAWEFAACGDVDAAASRFEKASIFYADCGLKLMAWEVLGLDDGTSEQTWWTRMCLAACLAHEESIVGAKDILEDCRAIENEVLDTAWRDSGHIRAMLFATVSAWTNFRMHGEDELVVDEVERALRLMRAAKPISFAVCFLGYSFIGEILMTLWERYLVSPPDNDFDGPLATRVRRLSRQSTAALRTMSDTFAFARPRSLLHSGRFRILCGQREKGMALLSRSVHDARRARFQLDEGLGLMEVGKASKGDVAIAALELSKTILRDSGAAYESNVAAEHLARLIASNTRVYT* # ORIGINAL: g4940.t1 original gene structure, not modified by PASA NODE_1196_length_13187_cov_41.0963 AUGUSTUS gene 7938 8150 . - . ID=g4940;Name=g4940.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS mRNA 7938 8150 . - . ID=g4940.t1;Parent=g4940;Name=g4940.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS exon 7938 8150 . - . ID=g4940.t1.exon1;Parent=g4940.t1 NODE_1196_length_13187_cov_41.0963 AUGUSTUS CDS 7938 8150 . - 0 ID=cds.g4940.t1;Parent=g4940.t1 #PROT g4940.t1 g4940 MLRRKPTRIELRMEDEDEYTAVRKAQAEAHQAGLTAGHVGAPTGASVAGVRAAGSGHQKKATTEQRIGYK* # PASA_UPDATE: g9369.t1, single gene model update, valid-1, status:[pasa:asmbl_2983,status:12], valid-1 NODE_1909_length_8619_cov_43.4342 . gene 7026 8455 . - . ID=g9369;Name=g9369.t1 NODE_1909_length_8619_cov_43.4342 . mRNA 7026 8455 . - . ID=g9369.t1;Parent=g9369;Name=g9369.t1 NODE_1909_length_8619_cov_43.4342 . five_prime_UTR 8431 8455 . - . ID=g9369.t1.utr5p1;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . exon 8248 8455 . - . ID=g9369.t1.exon1;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . CDS 8248 8430 . - 0 ID=cds.g9369.t1;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . exon 7574 8072 . - . ID=g9369.t1.exon2;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . CDS 7574 8072 . - 0 ID=cds.g9369.t1;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . exon 7026 7358 . - . ID=g9369.t1.exon3;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . CDS 7144 7358 . - 2 ID=cds.g9369.t1;Parent=g9369.t1 NODE_1909_length_8619_cov_43.4342 . three_prime_UTR 7026 7143 . - . ID=g9369.t1.utr3p1;Parent=g9369.t1 #PROT g9369.t1 g9369 MRSGEFDNAVTMMKDAMKGRPTSMEHARLARFARIHVTSLMKISDAPKFLASLVSDWADIEIGVFLYAAFGPMGEDEEFDHPDPKNTTIDFDRYMRAWEEMNDWEIAALKRIAQPFHLLRVGDRARFTTDAIVSLIWEAYVGGLNFNMSNVCVLVRAISGATGLAIAPEFFKSCCRRYKDNAGVMSSIVRDFFLEYWGTDSGHVFAALFKEATMAWSLAEISVIVTDAFRLVFDVQFAADVRALMQFCSVVFARDDCGGTASNSHHWTPSVPRVELRPQSLITHYLTPTRIAGRVGSG* # PASA_UPDATE: g9367.t1, single gene model update, valid-1, status:[pasa:asmbl_2984,status:12], valid-1 NODE_1909_length_8619_cov_43.4342 . gene 2 4285 . + . ID=g9367;Name=g9367.t1 NODE_1909_length_8619_cov_43.4342 . mRNA 2 4285 . + . ID=g9367.t1;Parent=g9367;Name=g9367.t1 NODE_1909_length_8619_cov_43.4342 . exon 2 1937 . + . ID=g9367.t1.exon1;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . CDS 2 1937 . + 0 ID=cds.g9367.t1;Parent=g9367.t1;5_prime_partial=true NODE_1909_length_8619_cov_43.4342 . exon 2117 2161 . + . ID=g9367.t1.exon2;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . CDS 2117 2161 . + 2 ID=cds.g9367.t1;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . exon 2301 3117 . + . ID=g9367.t1.exon3;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . CDS 2301 3117 . + 2 ID=cds.g9367.t1;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . exon 3341 3537 . + . ID=g9367.t1.exon4;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . CDS 3341 3537 . + 1 ID=cds.g9367.t1;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . exon 3930 4285 . + . ID=g9367.t1.exon5;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . CDS 3930 4069 . + 2 ID=cds.g9367.t1;Parent=g9367.t1 NODE_1909_length_8619_cov_43.4342 . three_prime_UTR 4070 4285 . + . ID=g9367.t1.utr3p1;Parent=g9367.t1 #PROT g9367.t1 g9367 FNCTSACPAACVTCSQGISGTGLCLSCPSNFYGSRCESQCLCASASDCNAGPSGTGVCSVCPANKYGSKCESSCSCNGGQCDAGPAGSGRCTSCRAGYYGAACTQQCNCNGGTCNEGPEGDGTCTACPSGKYGPACAASCNCGGLSCSDGPTGNGDCTNCPLNTFGVTCQACNCNGGSCNDGPSGNGACVACLANFYGANCTLSCACNGGTCHPDPSGNGKCVTCPAGAYGATCALKCNCGEFGCSDGPSGDGTCLGCVANKFGPTCALSCNCSGGVCMDGPTGTGVCTSCPKNRYGANCEKVCNCNGGACADGPSGDGLCISCPAQYYGPQCSIFCNATVTCSGRGTCDRGGSCVCSSAFKGLACDACASSLFGASCAGQCPLACATCSDGIRGTGLCTACPSGLYGSACEQRCTCLTVGDCNAGPSGTGNCAACPANTFGAKCAGTCSCNGGVCSAGPSGSGLCTSCPAGFYGASCSLRCDCNGGTCRDGPAGNGTCLTCPAGFYGASCASRCSCNGGACSEGPSGDGKCTSCPAGRYGASCGSQCQCKGLTCSDGPKGDGTCSIQCSAGFFGASCQQQCACNGGSCRDGVSGDGACTQCLGGFFGPRCKPCACNGGTCKDGIDGDGTCLTCPSSRFGSTCEGVCPNCASCDFGVMGSGKCIRCPRGFYGPTCSSACDCNNGTCVDGPTGSGACLTCPSNYFGNRCQTKCPCGPTPFTCSDGTAGTGECFSCASGQYGSRCENRCPACVNLACFDGLTGNGGCTGASKEQLAQAVRVSVSNKTADAFKDTDAEKSLKRVAAQNIASLIAGLRRATSITEGNIVFLQLMNTAAGVDLVLTVGAANADGTPVIVPAATLISAMQASVPALSSAGIHITGVVAFAVASGAGGPSQQSSSSGLSRGQMIGVIVGSIGGLCLISFVIFVAVRGARKNRGNYNMKNWLEMNKGADKQDAYQVPETASSFFFKPAVVSRSRATSVSSSHRQSSRRHHVEREHEVTVSASSYDERRQMPEALRDMIYGADPEGVTMSYSMSGRSILDTHM* # ORIGINAL: g9368.t1 original gene structure, not modified by PASA NODE_1909_length_8619_cov_43.4342 AUGUSTUS gene 4807 6569 . + . ID=g9368;Name=g9368.t1 NODE_1909_length_8619_cov_43.4342 AUGUSTUS mRNA 4807 6569 . + . ID=g9368.t1;Parent=g9368;Name=g9368.t1 NODE_1909_length_8619_cov_43.4342 AUGUSTUS exon 4807 5221 . + . ID=g9368.t1.exon1;Parent=g9368.t1 NODE_1909_length_8619_cov_43.4342 AUGUSTUS CDS 4807 5221 . + 0 ID=cds.g9368.t1;Parent=g9368.t1 NODE_1909_length_8619_cov_43.4342 AUGUSTUS exon 5458 6569 . + . ID=g9368.t1.exon2;Parent=g9368.t1 NODE_1909_length_8619_cov_43.4342 AUGUSTUS CDS 5458 6569 . + 2 ID=cds.g9368.t1;Parent=g9368.t1 #PROT g9368.t1 g9368 MDPPPPLKLSVTLVGPFRTGARMRFEGVSYCATASDLAHMILAETGVACASLSLCFESGVTVAFPRIVAGDGICRESGGFIVSPEVAFCETVTCRITPRDIPPLIIHVLVHQRRLDFSLRMHSTDTLGCLMKLIGDVLGTTTGDIHLFFNGVPIRGDPELPLANVGIHDGATVTAVIRARATAATTHTTTHNSTHAATRHKIAMVNIGEHVWSAMDITFTAASPDALSCTDGGLAFECSCLNDECTQAGQLTTTDVFLGSIDVLRETLPCRVCMSPLALITPAVRRCHWRAVGQWSDGRVAHAEWTQAGPAFTTPAHVMPSPGCTDLVSLVFEAGSLSRAVRTYCHQGPLPAPVTCTICHTNITCIEGGAALLTALGTCGHMFHAVCAKEYLSVTSAGPTSCPMCRTAASDGDVWPVVPASHRAPATVYPQEEMDRQRTNFDDYGNVTHCSNAAITACRLEVLSPTDPNSVTWTRSRRPASDMEDCGVATKRARVCDSEHRGLEEEAH* # ORIGINAL: g8956.t1 original gene structure, not modified by PASA NODE_2199_length_7312_cov_38.3829 AUGUSTUS gene 2 179 . + . ID=g8956;Name=g8956.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS mRNA 2 179 . + . ID=g8956.t1;Parent=g8956;Name=g8956.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 2 179 . + . ID=g8956.t1.exon1;Parent=g8956.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 2 179 . + 1 ID=cds.g8956.t1;Parent=g8956.t1 #PROT g8956.t1 g8956 NDKTGETRVRPPDVAGWEVVKRSSVNSFYYYLRRTGETTYDVPRPIIEEGDAKRQRYS* # ORIGINAL: g8957.t1 original gene structure, not modified by PASA NODE_2199_length_7312_cov_38.3829 AUGUSTUS gene 2441 6545 . - . ID=g8957;Name=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS mRNA 2441 6545 . - . ID=g8957.t1;Parent=g8957;Name=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 6448 6545 . - . ID=g8957.t1.exon1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 6448 6545 . - 0 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 5217 5382 . - . ID=g8957.t1.exon2;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 5217 5382 . - 1 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 4369 4464 . - . ID=g8957.t1.exon3;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 4369 4464 . - 0 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 3830 3926 . - . ID=g8957.t1.exon4;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 3830 3926 . - 0 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 3468 3515 . - . ID=g8957.t1.exon5;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 3468 3515 . - 2 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 3158 3331 . - . ID=g8957.t1.exon6;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 3158 3331 . - 2 ID=cds.g8957.t1;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS exon 2441 2628 . - . ID=g8957.t1.exon7;Parent=g8957.t1 NODE_2199_length_7312_cov_38.3829 AUGUSTUS CDS 2441 2628 . - 2 ID=cds.g8957.t1;Parent=g8957.t1 #PROT g8957.t1 g8957 MAEPFDQFAAAEGGDEMGISKWAGTPGNDVDEGDSHGFTPLHWAVRRGHLSVVGALLRANANPNKRNDAGDTPLHYAVTENYPSLIEKLLAAGSEIDATNSHGNTPLHYACFYRRDETATLLVSKGALVSRANKFGDSPLDKLTGDIKQRMSEFAKTVGQSLSKIPYTDVAAILIDRGANANATDTYGCTALHNASRKGRAAVVATLLDCAVDLHAVDKNGETALD*DPFYGSMALFEKVQSERRRRATREYLLKLGDAGMAEAVLAACAAQLKALGVQINMRWASGE* # ORIGINAL: g12651.t1 original gene structure, not modified by PASA NODE_3632_length_3079_cov_55.0652 AUGUSTUS gene 1302 2855 . + . ID=g12651;Name=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS mRNA 1302 2855 . + . ID=g12651.t1;Parent=g12651;Name=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 1302 1703 . + . ID=g12651.t1.exon1;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 1302 1703 . + 0 ID=cds.g12651.t1;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 1798 1839 . + . ID=g12651.t1.exon2;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 1798 1839 . + 0 ID=cds.g12651.t1;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 1944 2057 . + . ID=g12651.t1.exon3;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 1944 2057 . + 0 ID=cds.g12651.t1;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 2248 2620 . + . ID=g12651.t1.exon4;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 2248 2620 . + 0 ID=cds.g12651.t1;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 2728 2855 . + . ID=g12651.t1.exon5;Parent=g12651.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 2728 2855 . + 2 ID=cds.g12651.t1;Parent=g12651.t1 #PROT g12651.t1 g12651 MAWSSDGGGRMSLACDYLCNVACECGASTLAAPVHVRGDSHSLWFGLSLSLVDHAAILMLSVFLAGACCGAFVASAKGRRITARGAYYVRRLGKAVAHWPIARAITARVFGAWRAALRLPVVGFAIGGLASAVERRISDTSDAAMDFLDDPLQPPSKESKGLTMSLADRLLARIDEATGREDRSRLIGELRTLLTAVARRLGGGDQPHQQPQKPRLSLSPDPAQNADIMLPRDEIDLGERIAAGASGTVSLGRWRNTPVVIKRFYPRMRTSDLIADFRNEVVLSSSLRHPNIVQFLGAVCDPPADFWIVFEYMPRGTLLDVIRASKDVDNAGVGPPGWTWKFVIGLAIDAGV* # ORIGINAL: g12650.t1 original gene structure, not modified by PASA NODE_3632_length_3079_cov_55.0652 AUGUSTUS gene 175 997 . - . ID=g12650;Name=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS mRNA 175 997 . - . ID=g12650.t1;Parent=g12650;Name=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 949 997 . - . ID=g12650.t1.exon1;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 949 997 . - 0 ID=cds.g12650.t1;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 777 809 . - . ID=g12650.t1.exon2;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 777 809 . - 2 ID=cds.g12650.t1;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 522 670 . - . ID=g12650.t1.exon3;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 522 670 . - 2 ID=cds.g12650.t1;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS exon 175 315 . - . ID=g12650.t1.exon4;Parent=g12650.t1 NODE_3632_length_3079_cov_55.0652 AUGUSTUS CDS 175 315 . - 0 ID=cds.g12650.t1;Parent=g12650.t1 #PROT g12650.t1 g12650 MSVFGRCFTYLRGLDPDKVFSYKTVKIVRINDRRLGILHYLFVLAICAYVFGVTIIYQKRYMKTETPYGSVRIQLQKPPAASTPPSEIPYCLTAEHNVTPPYNYPNHKCLYWDEKLVVYQIRC* # ORIGINAL: g1463.t1 original gene structure, not modified by PASA NODE_721_length_18617_cov_40.5921 AUGUSTUS gene 198 1214 . - . ID=g1463;Name=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS mRNA 198 1214 . - . ID=g1463.t1;Parent=g1463;Name=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 705 1214 . - . ID=g1463.t1.exon1;Parent=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 705 1214 . - 0 ID=cds.g1463.t1;Parent=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 524 600 . - . ID=g1463.t1.exon2;Parent=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 524 600 . - 0 ID=cds.g1463.t1;Parent=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 198 279 . - . ID=g1463.t1.exon3;Parent=g1463.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 198 279 . - 1 ID=cds.g1463.t1;Parent=g1463.t1 #PROT g1463.t1 g1463 MADTRRSPRRNADGNLVEDDGGEVVADKPVKRRGRPPKNTQPRNPLMSEQDVQVPPVKKSTTKRRKSKKSKRGADLSGKNDSVRTVRISSGTVTSTWERLTDATRARLMRLMDGVTASVISTVNEAAQRASAQQLLFRIRRAFVDRMATMLAPPPPRSARADPDKLAYNIKQLEEMFLAHQAQVKVLEAEVETQRSRLDQEEEELAEYRDAAKLDTAAPPSRE # ORIGINAL: g1465.t1 original gene structure, not modified by PASA NODE_721_length_18617_cov_40.5921 AUGUSTUS gene 6745 10383 . - . ID=g1465;Name=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS mRNA 6745 10383 . - . ID=g1465.t1;Parent=g1465;Name=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 10287 10383 . - . ID=g1465.t1.exon1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 10287 10383 . - 0 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 10028 10081 . - . ID=g1465.t1.exon2;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 10028 10081 . - 2 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 9715 9815 . - . ID=g1465.t1.exon3;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 9715 9815 . - 2 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 9211 9223 . - . ID=g1465.t1.exon4;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 9211 9223 . - 0 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 8922 8983 . - . ID=g1465.t1.exon5;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 8922 8983 . - 2 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 8598 8645 . - . ID=g1465.t1.exon6;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 8598 8645 . - 0 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 8088 8215 . - . ID=g1465.t1.exon7;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 8088 8215 . - 0 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 7500 7694 . - . ID=g1465.t1.exon8;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 7500 7694 . - 1 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 7221 7299 . - . ID=g1465.t1.exon9;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 7221 7299 . - 1 ID=cds.g1465.t1;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 6745 6912 . - . ID=g1465.t1.exon10;Parent=g1465.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 6745 6912 . - 0 ID=cds.g1465.t1;Parent=g1465.t1 #PROT g1465.t1 g1465 MARLITITLPSGLRIAAKSWGPTDGKPFLGLHGWLDNSNTFDALAPLLPKDVNLVAIDLPGHGLSDHKPAGTSYMHADWLYNVRSVVDVLGWNRFSFMAHSMGAGIASMFTGTFPSRVDSVVLIEGIAPFFKSEREAADQLAKGIESLIALEGRKPKVYASRDECIAKLMHNYRSVTRESAEILCERSVRDVEKGGACFAHDTRLKASSPVMFSKTQVTNVLARVDCPVLLLMAENGLKFDADVISTLCDAIGAKRPSEFYRVVVPGTHHMHLNTPGHVIGPVLDFLSRHPTQRQPEPQSTAPHHHAQHHSNKL* # ORIGINAL: g1467.t1 original gene structure, not modified by PASA NODE_721_length_18617_cov_40.5921 AUGUSTUS gene 15449 17768 . - . ID=g1467;Name=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS mRNA 15449 17768 . - . ID=g1467.t1;Parent=g1467;Name=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 17580 17768 . - . ID=g1467.t1.exon1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 17580 17768 . - 0 ID=cds.g1467.t1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 17098 17353 . - . ID=g1467.t1.exon2;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 17098 17353 . - 0 ID=cds.g1467.t1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 16713 16849 . - . ID=g1467.t1.exon3;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 16713 16849 . - 2 ID=cds.g1467.t1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 16425 16514 . - . ID=g1467.t1.exon4;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 16425 16514 . - 0 ID=cds.g1467.t1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 16014 16167 . - . ID=g1467.t1.exon5;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 16014 16167 . - 0 ID=cds.g1467.t1;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS exon 15449 15636 . - . ID=g1467.t1.exon6;Parent=g1467.t1 NODE_721_length_18617_cov_40.5921 AUGUSTUS CDS 15449 15636 . - 2 ID=cds.g1467.t1;Parent=g1467.t1 #PROT g1467.t1 g1467 MAATTFDAYALVEVGKPLQLVTLDLPALKATEVRVEVTHCGICRSDVDFIDNKYGPVPLPLVAGHEVVGIVREVGALVKHIHVGHRVGVGPLRSSCADCSWCASGRDNLCATKELTIANGNKGGFAKWIQLDSHYTFPIPDALSSEAAAPLLCAGVTVYYPIVRHTTPDMTVGILGIGGLGHLGVRFAAKRGNKVVAFSTSPSKEKEAKHFGAHSFVNIKDPQQMAGAAKSLDFLLSTVDANINWMEYLQLMKPDGKICVVGASMGPINIPAGLLIMGQTTFVGSAAGPRSSTIEMLEFAARHNIAADVEVVSFDTINDAVDRVRKGTSAFRVVLKH* # PASA_UPDATE: g1466.t1, single gene model update, valid-1, status:[pasa:asmbl_9046,status:12], valid-1 NODE_721_length_18617_cov_40.5921 . gene 11935 14858 . - . ID=g1466;Name=g1466.t1 NODE_721_length_18617_cov_40.5921 . mRNA 11935 14858 . - . ID=g1466.t1;Parent=g1466;Name=g1466.t1 NODE_721_length_18617_cov_40.5921 . exon 14545 14858 . - . ID=g1466.t1.exon1;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . CDS 14545 14858 . - 0 ID=cds.g1466.t1;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . exon 13832 14111 . - . ID=g1466.t1.exon2;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . CDS 13832 14111 . - 1 ID=cds.g1466.t1;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . exon 13339 13412 . - . ID=g1466.t1.exon3;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . CDS 13339 13412 . - 0 ID=cds.g1466.t1;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . exon 11935 13177 . - . ID=g1466.t1.exon4;Parent=g1466.t1 NODE_721_length_18617_cov_40.5921 . CDS 11935 13177 . - 1 ID=cds.g1466.t1;Parent=g1466.t1 #PROT g1466.t1 g1466 MTADDVAEEISALRTDEHNVKGLAVFSIFVTLILFAASAIFFYFSVRGTGLKYRRQHGNYGNAPEFSNLAGMAACITAVVWFARATDHILLANGVMASFPVRNYRYYNYLISAPMLVLDICIVTEQPFKWSYTLLTAITMFLGIAAINTGQPVSGESYAYFALGCCVFSILYFNFFKNIYLRVRYYPKHLQFYLKAAMWTFLFTWPMFPLLFIIGPYFCDFISIEADEYFNGFLDASAKIVYSAFLMRFRLGLEDIYNLKAMTADALLRARGADQSQVNVPTPLRTSTIDTSGTAESAPAGADMCPIAVRNYEGGRNNSLVYEHAARQSTSDDATTRYSHNVHDSHYGNRHNKQHDHGGRADGSSSLSHNDYLPQSDTYAMPRSLSGRSRNFPVRTLAVNVNDSNVSIALPFGVVDENQERPRGPQPLGDGPATMGRKAGFSRSASVQYYYHDDSPMESAVAYSFTAERNRNSNMTGAGTHTIQDTRQHGQQSAAAVQQRTGHSRSASVQYDHSDAMLEWAAATRAALSERGAPASADDHDGYLYQCDTRPVSYRLSPLVTPRGHYDSATHDAFSTDRQADSGEWNTVATHIGANTTNVDAGGNGQSPVGQLRAILQGMLSSLSSAYGDSNSSVPQ* # PASA_UPDATE: g1464.t1, single gene model update, valid-1, status:[pasa:asmbl_9050,status:3], valid-1 NODE_721_length_18617_cov_40.5921 . gene 1742 6212 . + . ID=g1464;Name=g1464.t1 NODE_721_length_18617_cov_40.5921 . mRNA 1742 6212 . + . ID=g1464.t1;Parent=g1464;Name=g1464.t1 NODE_721_length_18617_cov_40.5921 . five_prime_UTR 1742 1806 . + . ID=g1464.t1.utr5p1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 1742 1932 . + . ID=g1464.t1.exon1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 1807 1932 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 2078 2153 . + . ID=g1464.t1.exon2;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 2078 2153 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 2364 2389 . + . ID=g1464.t1.exon3;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 2364 2389 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 2617 2691 . + . ID=g1464.t1.exon4;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 2617 2691 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 2878 2989 . + . ID=g1464.t1.exon5;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 2878 2989 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 3160 3254 . + . ID=g1464.t1.exon6;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 3160 3254 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 3437 3524 . + . ID=g1464.t1.exon7;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 3437 3524 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 3634 3750 . + . ID=g1464.t1.exon8;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 3634 3750 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 4079 4236 . + . ID=g1464.t1.exon9;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 4079 4236 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 4469 4580 . + . ID=g1464.t1.exon10;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 4469 4580 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 4757 5016 . + . ID=g1464.t1.exon11;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 4757 5016 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 5317 5434 . + . ID=g1464.t1.exon12;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 5317 5434 . + 0 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 5624 5759 . + . ID=g1464.t1.exon13;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 5624 5759 . + 2 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . exon 5998 6212 . + . ID=g1464.t1.exon14;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . CDS 5998 6019 . + 1 ID=cds.g1464.t1;Parent=g1464.t1 NODE_721_length_18617_cov_40.5921 . three_prime_UTR 6020 6212 . + . ID=g1464.t1.utr3p1;Parent=g1464.t1 #PROT g1464.t1 g1464 MADADFISDGLTARQLFSQQIGLTYNDFLLLPGYIDFTADEVDLSTQLTKSISLKTPFVSSPMDTITESEMAIMMALMGGIGIVHHNCTPEEQAEHVRKVKRYEQGFILNPIVLTEAHTVGDVFAIKEKYGFAGIPITATGAMGGKLLGIISARDIDFIKKELWSTPLSEIMTKHDDLVTGHAGCSLEEANRILQTSKKGKLPIVNDNDELVALIARTDLKKNRSYPLASKDSKKQLLAGAAIGTRPEDRHRLDLLVQAGLDVIVLDSSQGNSVFQIEMVRFIKSKYPNLQVVAGNVVTQAQAKNLIEAGADALRVGMGSGSICITQEVMACGRPQGTAVYQVAEYARRFGVPVIADGGISNVGHVIKASALGASSVMMGSLLAGTSEAPGEYYFSNGIRLKKYRGMGSLDAMEKDGSKKRYFSETDQIKVAQGVSGAVVDKGSIQAFIPYLVAGVKHGLQDIGARSLTQLREMSANGDLRFERRTPAAQQEGGVHSLHSYEKRLF* # ORIGINAL: g13508.t1 original gene structure, not modified by PASA NODE_1668_length_9894_cov_37.0524 AUGUSTUS gene 1752 6980 . + . ID=g13508;Name=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS mRNA 1752 6980 . + . ID=g13508.t1;Parent=g13508;Name=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 1752 3679 . + . ID=g13508.t1.exon1;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 1752 3679 . + 0 ID=cds.g13508.t1;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 3957 4083 . + . ID=g13508.t1.exon2;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 3957 4083 . + 1 ID=cds.g13508.t1;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 4474 4692 . + . ID=g13508.t1.exon3;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 4474 4692 . + 0 ID=cds.g13508.t1;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 5081 5457 . + . ID=g13508.t1.exon4;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 5081 5457 . + 0 ID=cds.g13508.t1;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 5660 6980 . + . ID=g13508.t1.exon5;Parent=g13508.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 5660 6980 . + 1 ID=cds.g13508.t1;Parent=g13508.t1 #PROT g13508.t1 g13508 MLSTLARRALGSRRSPSTLNCGDVNLASLFAACTSSTSASVTLRAHISTSAALSARLRSTTRKANGVSADNSPASLSATSNANASARVAQSDAQSERRASPAAKSPRSLEKNLRSAQFDDGVRVERGDNSASRRTEGASATTLRDQSSRPPPWKSASGEKRSYGGDNEEGNNRWRDSPYGSASGRSTLSRGSYGGRGSSGARSQSGALGFQGREKDAARTGYADGRGPSYSREYRSGESNRGESEGYSGHSSGRGRGSYSGRGGMRGGRDREYGQDARSSGRGGYMSGRSFEGNSAPRMGYQRGGSANGGMSRTDSYEQRSSESSPRRGGAYERTGGTNARGRDGRNSYEQNRSDKGSGGFGGSGYGGPRFEDARATDGDAGVGRGGFRSRGASTRGGRNAAGGYGARDEVTARGRRSLKEGGLGAESENGTVKKKVVVPPEKPTYESLAEKVYDAAKPRDVNRVSLTEGVADTAVGSTVSPDTSPDRSVAPLSGSTPTPTTKRKKRSAPSPTPTVPRPKDVKPKAKTVKQSARAAVVDKIASASTEEGVLSAGKDRRTELSSGIVPASSLVVESTVTRSATGETVDTREESAEVDSVRALDVSDHFLPLKIQPYLSMHLRKMRVKVPAPIQVLAIPPIMKDRDVLIQSDTGTGKTLAFLLPIIMKTDNYKPFLQSIIVVPTRELAHQLHRTTEKLTTGGSKKRKDHPVRVVHYCGNVADKAKEWMEKGAAPPHIAIGTPQTILAMLQKGVLSTTHLKSIVFDEIDFLLEPNLANVTTAIVDAISSSSSVVRPQRIVVSATITREVRRFAEKKLKDSFFARTNAGKSIEVADDVTDALSTPSQAATSDDVTKTGVAALPALTKAVRFSAMIPLKPIHSVIECNMPDSRGRLPDIDVNRLLNDNAALLTPSELLMCDALARLCRVGGELSDFNQASTIVFVNDAKRASLFESVLRNTYHLRVSSLTSSTDKDARRQAMVATRIGQSNILLCTEMAARGLDIPNIGNAVFFGVPASARAYVHRSGRIGRLGQLTKSLVGSTLRQSTLKGMGSQTSKSANEHDEHAESGASAGVGDAAAGTDVAKENTTTHVVVGDGAEAVHGGHKQNDERIHTHSAVLELKPKRKAAAAAAVTPAEEEEEEDDGDAHVDAQEDDADRREFDENPLYIAGGRVITLVTSPVDAARARELLKELDIAESMLAVPPISDRRLKRDRQLRSIVNKTLSPQSVDVDATAADASERGEDDGDDAMSATVSASGSTVEELAESDETRDVDVARGRARARGRARGRVTSETAQSAKSVNAEMSGENLQGTAAATAAATATATQ* # ORIGINAL: g13509.t1 original gene structure, not modified by PASA NODE_1668_length_9894_cov_37.0524 AUGUSTUS gene 7705 9051 . + . ID=g13509;Name=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS mRNA 7705 9051 . + . ID=g13509.t1;Parent=g13509;Name=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 7705 7814 . + . ID=g13509.t1.exon1;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 7705 7814 . + 0 ID=cds.g13509.t1;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 7986 8064 . + . ID=g13509.t1.exon2;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 7986 8064 . + 1 ID=cds.g13509.t1;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 8499 8560 . + . ID=g13509.t1.exon3;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 8499 8560 . + 0 ID=cds.g13509.t1;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS exon 8829 9051 . + . ID=g13509.t1.exon4;Parent=g13509.t1 NODE_1668_length_9894_cov_37.0524 AUGUSTUS CDS 8829 9051 . + 1 ID=cds.g13509.t1;Parent=g13509.t1 #PROT g13509.t1 g13509 MALNPQGHNRAANSSSAGTDGRQLFMQSYDLGNQLGQGAFAVVKKCTNKITGKDCAVKIINRTTEKNDLQLLQEIRLLTRMKHKHIVELFETFESPKHMYIVMELVSGGEMFDRIVDKGYFEEADAAKVGDQPVGVVCVVYVVGVVCRTPQPYMATT* # PASA_UPDATE: g13507.t1, single gene model update, valid-1, status:[pasa:asmbl_2280,status:12], valid-1 NODE_1668_length_9894_cov_37.0524 . gene 329 1461 . - . ID=g13507;Name=g13507.t1 NODE_1668_length_9894_cov_37.0524 . mRNA 329 1461 . - . ID=g13507.t1;Parent=g13507;Name=g13507.t1 NODE_1668_length_9894_cov_37.0524 . five_prime_UTR 1266 1461 . - . ID=g13507.t1.utr5p1;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . exon 1186 1461 . - . ID=g13507.t1.exon1;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . CDS 1186 1265 . - 0 ID=cds.g13507.t1;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . exon 846 951 . - . ID=g13507.t1.exon2;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . CDS 846 951 . - 1 ID=cds.g13507.t1;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . exon 329 688 . - . ID=g13507.t1.exon3;Parent=g13507.t1 NODE_1668_length_9894_cov_37.0524 . CDS 329 688 . - 0 ID=cds.g13507.t1;Parent=g13507.t1 #PROT g13507.t1 g13507 MGRLHRAYVALGSNLGDRHANISNAVRFLEQRFNCRAQTSHIYESSAAYVTEQPPFLNAVCSIPTELSPEDLLPVLKDGERQLDRKETFRWGPRVIDMDIAFCCGEDGDLPNMPQLPEQPHSVADAASINLGHPRDQRHGLERHGSRTTAEKRGCVVKSDALCVPHARVAEREFVLRPLCE* # ORIGINAL: g2999.t1 original gene structure, not modified by PASA NODE_18349_length_185_cov_26.2_potentialcontaminant AUGUSTUS gene 2 185 . + . ID=g2999;Name=g2999.t1 NODE_18349_length_185_cov_26.2_potentialcontaminant AUGUSTUS mRNA 2 185 . + . ID=g2999.t1;Parent=g2999;Name=g2999.t1 NODE_18349_length_185_cov_26.2_potentialcontaminant AUGUSTUS exon 2 185 . + . ID=g2999.t1.exon1;Parent=g2999.t1 NODE_18349_length_185_cov_26.2_potentialcontaminant AUGUSTUS CDS 2 185 . + 1 ID=cds.g2999.t1;Parent=g2999.t1 #PROT g2999.t1 g2999 GVISSKEAEVTSVREEIASVEARAAAAEGRVSELESAIGALESEVSRLKEKGQRDDASIAE # PASA_UPDATE: g12370.t1, single gene model update, valid-1, status:[pasa:asmbl_7589,status:12], valid-1 NODE_4760_length_1267_cov_25.0654 . gene 89 981 . - . ID=g12370;Name=g12370.t1 NODE_4760_length_1267_cov_25.0654 . mRNA 89 981 . - . ID=g12370.t1;Parent=g12370;Name=g12370.t1 NODE_4760_length_1267_cov_25.0654 . exon 887 981 . - . ID=g12370.t1.exon1;Parent=g12370.t1 NODE_4760_length_1267_cov_25.0654 . CDS 887 981 . - 0 ID=cds.g12370.t1;Parent=g12370.t1;5_prime_partial=true NODE_4760_length_1267_cov_25.0654 . exon 510 616 . - . ID=g12370.t1.exon2;Parent=g12370.t1 NODE_4760_length_1267_cov_25.0654 . CDS 510 616 . - 1 ID=cds.g12370.t1;Parent=g12370.t1 NODE_4760_length_1267_cov_25.0654 . exon 89 261 . - . ID=g12370.t1.exon3;Parent=g12370.t1 NODE_4760_length_1267_cov_25.0654 . CDS 89 261 . - 2 ID=cds.g12370.t1;Parent=g12370.t1 #PROT g12370.t1 g12370 VPLFAGTTAQFRILLAQSLRPITILAGWDVFNAGEDGYEMYFIRMGEVELLSDDGTVLAKLQDGSHFGEIALFEQTRHVLSCRAKTDCDLCVLTRTAFEALMSRSEGDQPIVRKNIEERREQEK* # ORIGINAL: g7668.t1 original gene structure, not modified by PASA NODE_3649_length_3032_cov_38.3734 AUGUSTUS gene 656 1605 . - . ID=g7668;Name=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS mRNA 656 1605 . - . ID=g7668.t1;Parent=g7668;Name=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS exon 1583 1605 . - . ID=g7668.t1.exon1;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS CDS 1583 1605 . - 0 ID=cds.g7668.t1;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS exon 1390 1481 . - . ID=g7668.t1.exon2;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS CDS 1390 1481 . - 1 ID=cds.g7668.t1;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS exon 1005 1189 . - . ID=g7668.t1.exon3;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS CDS 1005 1189 . - 2 ID=cds.g7668.t1;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS exon 656 736 . - . ID=g7668.t1.exon4;Parent=g7668.t1 NODE_3649_length_3032_cov_38.3734 AUGUSTUS CDS 656 736 . - 0 ID=cds.g7668.t1;Parent=g7668.t1 #PROT g7668.t1 g7668 MKVVALISGGKDSCYNMVQCVAMGHEITALANLRPRDKDELDSFCFQSVGHEAIDAIGEAMGLPLFRRYLAGGSVDQSMDYSITGGDEVEDLYLLLREVKEAMPDVRGVSVGAILSDYQRIRVENV* # ORIGINAL: g13257.t1 original gene structure, not modified by PASA NODE_688_length_19039_cov_46.4694 AUGUSTUS gene 5059 9881 . + . ID=g13257;Name=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS mRNA 5059 9881 . + . ID=g13257.t1;Parent=g13257;Name=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 5059 5103 . + . ID=g13257.t1.exon1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 5059 5103 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 5657 5866 . + . ID=g13257.t1.exon2;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 5657 5866 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 6016 6168 . + . ID=g13257.t1.exon3;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 6016 6168 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 6435 6928 . + . ID=g13257.t1.exon4;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 6435 6928 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 7298 7418 . + . ID=g13257.t1.exon5;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 7298 7418 . + 1 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 7887 8106 . + . ID=g13257.t1.exon6;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 7887 8106 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 8516 8760 . + . ID=g13257.t1.exon7;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 8516 8760 . + 2 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 8947 9129 . + . ID=g13257.t1.exon8;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 8947 9129 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 9396 9881 . + . ID=g13257.t1.exon9;Parent=g13257.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 9396 9881 . + 0 ID=cds.g13257.t1;Parent=g13257.t1 #PROT g13257.t1 g13257 MMRKKSKAEDLQRRESHVGRALQQAADAVFLASRIPAMVPGEVVICSADHVDLHQYGTERPRLPGDLFVTNYKLAFLPAEMSTYKDDGNLNESYNLFEVPLTTVLRIGVGSGTRLSRMVKRLPSDVAFEEAEIRCKDTRRLLFSFDRCSKPVRSKLLNSLFHHAFPNAIGRLFAFDYHAALSASRALSSSGGANNNNNNNNNNNNNKTLVPKRDSNTDVLSSSSSSAASAGKQSTANSGSGGNAMAMGEVTEGSRPPRHQSIDHTRLPEYRDLMREMMRMAVGDDRWRIADINIEFAVCESYPRFFVCPTSITDELISKSASLRVGRRFPVWAYSHAANGASILRAAAVQRESATASQFAIGHTAAHVDPWREVVASVVGGDSAFAAIDLDVRPCPSTADIRDAYAQLSSLCAKASRSKEDGEVRWLSSLDDTRWPAHISACLKLAVEVAECVQRGVTVLLEGGGGRDRVIVISALAQIILDPFCRTMQGLQSLIQREFVLGGHPFSLRSGLFGTIPGAKTKQMAPVFIFFMDCVRAIADQFPESFEASVAFVFFLVMSPRYFVELADCCHKSLFGNFLCNSEHERRASGVSSRTLSAWDNWLSDDALALSVTNPTFKFNDRCLGIVVAGPLPWLWEPFFLRWLFVAQSKGGVDSAIAGLRVLQAQYASLLDERAQRMQERKKSVAVQALASASVITENDATEATAAQSSAPDEASIK* # ORIGINAL: g13256.t1 original gene structure, not modified by PASA NODE_688_length_19039_cov_46.4694 AUGUSTUS gene 252 4091 . + . ID=g13256;Name=g13256.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS mRNA 252 4091 . + . ID=g13256.t1;Parent=g13256;Name=g13256.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 252 4091 . + . ID=g13256.t1.exon1;Parent=g13256.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 252 4091 . + 0 ID=cds.g13256.t1;Parent=g13256.t1 #PROT g13256.t1 g13256 MGRCGAVLFVLWLSTMHLAGIFLFSKGFMLTRLSLSQTATCSADGAILIGSDSVTLPATAGCRVQKPYDRVILLVVDALRFDFVAHDASAAALANATGAPLPHYLNKMPLVRQMLDGQGNDTRVAHAKLFRFVADAPTTTMQRIKALMTGSLPTFIDAGSNFAATTVLEDNILAQLGGRAVFVGDDTWAEMFPSSFIRTHPYPSFNVRDLDTVDAGVERHIFPEMSAIGEWDLAVAHMLGVDHCGHRHGPNHPAMSRKLAQVDSLINRISIAMGDRDILLVLGDHGMTRDGDHGGDSRGEVDAALIAVSKRPFARVPQAFLDAIAASEDADALGVTVEESGASVSDNSRAIVRAIAQIDLVPTLAALLGVPIPFGNIGAAVVPELTGLSVNRRDNDAMAADAVGGGGRSGDDDADESVLRAVDWLGINAMQVAAYSKAYAVASNNGNSNNGNNGIDADVHASDLSSAREFHAAAANSAPGSEQRMRLACDAASAYVRFLRGNRRNFVSMWARFDVAAMVAGLVVLCLSVVCAGASASWLKVVGMDLPSRGHVVRGIALGAVVAAVAQGALMSLDTDALLSNGFKYSEFLGGFFLFGSFFCPLFSAIAPVAQSLWSSTASGGVGIARVLRALSIHAPSISSPLASFACACVAIRAVGFLSNSFVVGDDAVVHFVAVSVIIAHVVLLVASAASDPSGANGAVAKTLRPRLRTIMLLFFALAVCMRMLMTFGLCREEQSKCYAGGNRASNATNTKDPSATAGIDASSPASVTTGALFGDLWVHAAIAAAVVFACRWRMSVHGNTGGVFGRYADFFPWLSGGVLLTYWVHAGLPVAGGTPAWVSIVYPRTMYAMSLVGGALIFAFPVTVREESQPKEAATGAAAATSPRDQRGRAVVHGLRTVFSSVVVGTIGLLLPVVVMLMGRGRIFPTALACVCAALLCRLASELGEVEFYAASHRRIRQLTSALSTQSDTATPDAKTATLDGAAALSDKTAKAQGATASGRAPSINNSKVAPQSRGKGRRRDGEPTTQTTHDPHVSASPSAAAAAGSADESNSESNEDSAVALPVEAFDVDRRQGTTASLVVAWSFVAACVFYATGHQPALASIRWGAAFEGFTGSDGARIAPAILVLFDTFWPQLLFAIASPLLALAAESTIGEANPSDGEGEYRLRRERAEGRDGPFWAAAVRAPIIMSACNAVWVVGSACAGFVHRRHLMVWKIFAPNFVFSALGLIAVDVGAVVVVLLLERCDGALLRWAASIAGRLGQTPTVAPAVAATHPAQR* # ORIGINAL: g13259.t1 original gene structure, not modified by PASA NODE_688_length_19039_cov_46.4694 AUGUSTUS gene 12919 17222 . + . ID=g13259;Name=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS mRNA 12919 17222 . + . ID=g13259.t1;Parent=g13259;Name=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 12919 12992 . + . ID=g13259.t1.exon1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 12919 12992 . + 0 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 13095 13183 . + . ID=g13259.t1.exon2;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 13095 13183 . + 1 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 13351 13475 . + . ID=g13259.t1.exon3;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 13351 13475 . + 2 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 13671 13784 . + . ID=g13259.t1.exon4;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 13671 13784 . + 0 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 14165 14358 . + . ID=g13259.t1.exon5;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 14165 14358 . + 0 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 14587 14740 . + . ID=g13259.t1.exon6;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 14587 14740 . + 1 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 15225 15389 . + . ID=g13259.t1.exon7;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 15225 15389 . + 0 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 15720 15888 . + . ID=g13259.t1.exon8;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 15720 15888 . + 0 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 16030 16176 . + . ID=g13259.t1.exon9;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 16030 16176 . + 2 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 16466 16624 . + . ID=g13259.t1.exon10;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 16466 16624 . + 2 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 16857 16982 . + . ID=g13259.t1.exon11;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 16857 16982 . + 2 ID=cds.g13259.t1;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS exon 17158 17222 . + . ID=g13259.t1.exon12;Parent=g13259.t1 NODE_688_length_19039_cov_46.4694 AUGUSTUS CDS 17158 17222 . + 2 ID=cds.g13259.t1;Parent=g13259.t1 #PROT g13259.t1 g13259 MDSNSYVDTDVEMIPAELSLEEKTALAESKKNAGNDAYKRGDYREAIENYTAAIDLFPHNAAFYGNRSAAYIMLEKFAEACEDARIAISIDSKFVKAYLRAGKSSLALGKIADSKRYYAAALEIEPHNADAAKEGQTVNIVDQRFQRALNAIQQNEHEIAVTNLEICLEYAPAAANFKLLRARSLIKLRKFSEASRVASEVLNVDQFNSDAWYVRGLALYYEGNAEQAKNHFMRALRVDSEHEESRLQLKKTKQLEAEKQNGNTAFSAGRFQEAYDIYSSALAVDPENININSKLYLNRAIAGAKLNKLAEAAQDCTKALELDSSYTKALAKRAELYRAMEKWEELVQDYEKLTKMDSSNREYARLLKEAKLELKKSKRKDYYKILDVGKDAGDDEIKKAYRRLALKYHPDKNSDSEQSKKEAEHQFKEVGEAYAVLSDAKKRQRYDAGQDLDGESGFGGGEDGVDVDHIFQMFFNGGGMGGMGGMGGMGGGYGGFGGGGGGRRRSSGRSHHGSHHGHSHGGDFDF* # PASA_UPDATE: g13258.t1, single gene model update, valid-1, status:[pasa:asmbl_8876,status:12], valid-1 NODE_688_length_19039_cov_46.4694 . gene 10530 11918 . - . ID=g13258;Name=g13258.t1 NODE_688_length_19039_cov_46.4694 . mRNA 10530 11918 . - . ID=g13258.t1;Parent=g13258;Name=g13258.t1 NODE_688_length_19039_cov_46.4694 . exon 11721 11918 . - . ID=g13258.t1.exon1;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . CDS 11721 11918 . - 0 ID=cds.g13258.t1;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . exon 11211 11454 . - . ID=g13258.t1.exon2;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . CDS 11211 11454 . - 0 ID=cds.g13258.t1;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . exon 10530 11084 . - . ID=g13258.t1.exon3;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . CDS 11074 11084 . - 2 ID=cds.g13258.t1;Parent=g13258.t1 NODE_688_length_19039_cov_46.4694 . three_prime_UTR 10530 11073 . - . ID=g13258.t1.utr3p1;Parent=g13258.t1 #PROT g13258.t1 g13258 MARSTRRSAPAPAARPAAPRSAPAPAPAPAMHQSHPPAPMMQQPQQPGMFAQMATTAAGVAVGSAVGHTLGAGLTSMFSGSKSEEAAAPAAAAPASYQQQPYQQQQAQGGPCGYEMQQFMQCVQSASSDISFCQNFSEALRMCKLNNGLQ* # PASA_UPDATE: g6358.t1, single gene model update, valid-1, status:[pasa:asmbl_6770,status:3], valid-1 NODE_395_length_24854_cov_40.5095 . gene 1993 5283 . - . ID=g6358;Name=g6358.t1 NODE_395_length_24854_cov_40.5095 . mRNA 1993 5283 . - . ID=g6358.t1;Parent=g6358;Name=g6358.t1 NODE_395_length_24854_cov_40.5095 . five_prime_UTR 5100 5283 . - . ID=g6358.t1.utr5p1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 4963 5283 . - . ID=g6358.t1.exon1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 4963 5099 . - 0 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 4754 4830 . - . ID=g6358.t1.exon2;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 4754 4830 . - 1 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 4581 4638 . - . ID=g6358.t1.exon3;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 4581 4638 . - 2 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 3852 4394 . - . ID=g6358.t1.exon4;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 3852 4394 . - 1 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 3031 3619 . - . ID=g6358.t1.exon5;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 3031 3619 . - 1 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . exon 1993 2840 . - . ID=g6358.t1.exon6;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . CDS 2487 2840 . - 0 ID=cds.g6358.t1;Parent=g6358.t1 NODE_395_length_24854_cov_40.5095 . three_prime_UTR 1993 2486 . - . ID=g6358.t1.utr3p1;Parent=g6358.t1 #PROT g6358.t1 g6358 MGSVAESRRPAGGPPGPMASSSASNTASMLVHATKHKPPKRPPAVSVTPPLEDDSVSGWDDGVDTFVADDVDLAKWDSLSQPSRLAWLEQCCDGASLPSCIVLGESSDDDGSEMEDAPAESTSTTPQQNPQSQIFNFSGTTQMPQLDSGTHTHKDAMSTTVNASEASPSADNLPPRRRKGCSSAPPAPPSVLGLSTLDIVQALTWVGNFEKVVTRRCGDDTGASSGVTEGNPAAVGARGGVRSGGNVRQLPSSAPADTRHVVLPYKFKYMRRGPDAPSTINAAVVGAVVVAPPPNPQQHQAMLAAIAAATSPMQAVALPTSMVLQYAPATAMAGASSRFLANPMLTESALEARRALAPRVDNGGHRGYPDGGKTSGLPSAQAATVKDLRAAHSRHRMTYTVSRGDDSDGEGAIAYKGGSLFGGPVGQSSSAKGGNGSGMGSASGGALSGWDAKLALNAPLAIVHEGDKSKPRKVGVVFPSVQTRMAAHASSSPPRASSFVFPPKDSGQCDVPQYPHISALTKHATPFSGRGDGRSDPLLRAGVDTQSSVPRMVSAVRIELMDTMAPVACGKNLGSTHGGSYHGAK* # ORIGINAL: g6357.t1 original gene structure, not modified by PASA NODE_395_length_24854_cov_40.5095 AUGUSTUS gene 145 1300 . - . ID=g6357;Name=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS mRNA 145 1300 . - . ID=g6357.t1;Parent=g6357;Name=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 938 1300 . - . ID=g6357.t1.exon1;Parent=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 938 1300 . - 0 ID=cds.g6357.t1;Parent=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 604 660 . - . ID=g6357.t1.exon2;Parent=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 604 660 . - 0 ID=cds.g6357.t1;Parent=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 145 396 . - . ID=g6357.t1.exon3;Parent=g6357.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 145 396 . - 0 ID=cds.g6357.t1;Parent=g6357.t1 #PROT g6357.t1 g6357 MDYARNHNHARAFKLACVVVIATVLYCDAADTGTDLPVDGLQSDTHCGAAHPNIYVAYKVDSGAIILDGVPDEIAWADVSFTDEFVDIQGATLPHPRFSTFAKMRFDNEFLYVAAIMQEPQVWANQTQHDSIVYLDNDFEVFVDPDGNTHWYKEFEVNALETTFNLILSKPYLDGGAANWTGWDVPLKAAVSIDGGRVNAPNSGNRGWSVELALPLASLGYNEK # PASA_UPDATE: g6359.t1, single gene model update, valid-1, status:[pasa:asmbl_6771,status:3], valid-1 NODE_395_length_24854_cov_40.5095 . gene 6190 9036 . + . ID=g6359;Name=g6359.t1 NODE_395_length_24854_cov_40.5095 . mRNA 6190 9036 . + . ID=g6359.t1;Parent=g6359;Name=g6359.t1 NODE_395_length_24854_cov_40.5095 . five_prime_UTR 6190 6264 . + . ID=g6359.t1.utr5p1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 6190 6553 . + . ID=g6359.t1.exon1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 6265 6553 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 6665 7203 . + . ID=g6359.t1.exon2;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 6665 7203 . + 2 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 7333 7455 . + . ID=g6359.t1.exon3;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 7333 7455 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 7645 7737 . + . ID=g6359.t1.exon4;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 7645 7737 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 7924 8094 . + . ID=g6359.t1.exon5;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 7924 8094 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 8263 8367 . + . ID=g6359.t1.exon6;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 8263 8367 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . exon 8571 9036 . + . ID=g6359.t1.exon7;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . CDS 8571 8822 . + 0 ID=cds.g6359.t1;Parent=g6359.t1 NODE_395_length_24854_cov_40.5095 . three_prime_UTR 8823 9036 . + . ID=g6359.t1.utr3p1;Parent=g6359.t1 #PROT g6359.t1 g6359 MGIGASVDRGNLSTWSLIKRTKHIHVVYQQRVEVIEIHPGTTGEELKDLLLAICDARSHAVITLRNNAGMITPITASIRENTSATPYVIEVVSGGSAGGSSGRGESPITNLAEEFQKAFLFKEFQEDMVGRIGRLEGKFEEHAARESELTLLKREISEMRDRFSLTESEGDHSGRRINVLIEPPRRRSLSMEVPTFPKYVFTDETKQYLRNPTFNIWQWEANEMLNLLELIFYDLGLVAEFKINPLTLKHWLVRVKQNYKNNPFHNFRHCFCVAQMMYGMIYLCELQNKLSKLDQLILIVSAVCHDLDHPGQNNAYQINARTELAIRYNDISPLENHHCAVAFEILREAECNIFANVDNDTFKLIRQGMIALILATDMVKHGDFVKDFQRIHKAIDYTSVEHKKLLMQVLLKCCDISNEARPMKVSEPWLDCLLEEYFAQSDLEKKTGLPVAPFMDRDKVTKPTAQIGFIKYVLIPLFESMVVPFPQVEPVLLDQLRRAHDHYVKMKEIDDALLAKNIAVAAK* # PASA_UPDATE: g6361.t1, single gene model update, valid-1, status:[pasa:asmbl_6772,status:12], valid-1 NODE_395_length_24854_cov_40.5095 . gene 16768 20485 . + . ID=g6361;Name=g6361.t1 NODE_395_length_24854_cov_40.5095 . mRNA 16768 20485 . + . ID=g6361.t1;Parent=g6361;Name=g6361.t1 NODE_395_length_24854_cov_40.5095 . five_prime_UTR 16768 17569 . + . ID=g6361.t1.utr5p1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . five_prime_UTR 17703 17741 . + . ID=g6361.t1.utr5p2;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 16768 17569 . + . ID=g6361.t1.exon1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 17703 18581 . + . ID=g6361.t1.exon2;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 17742 18581 . + 0 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 18731 18842 . + . ID=g6361.t1.exon3;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 18731 18842 . + 0 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 18968 19016 . + . ID=g6361.t1.exon4;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 18968 19016 . + 2 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 19147 19323 . + . ID=g6361.t1.exon5;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 19147 19323 . + 1 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 19625 19674 . + . ID=g6361.t1.exon6;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 19625 19674 . + 1 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 19968 20136 . + . ID=g6361.t1.exon7;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 19968 20136 . + 2 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . exon 20327 20485 . + . ID=g6361.t1.exon8;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . CDS 20327 20465 . + 1 ID=cds.g6361.t1;Parent=g6361.t1 NODE_395_length_24854_cov_40.5095 . three_prime_UTR 20466 20485 . + . ID=g6361.t1.utr3p1;Parent=g6361.t1 #PROT g6361.t1 g6361 MRGLVHNERYAYVVRAVNPVDAKLLTVSEPALMDFVRAAGKTDVPDRPAFVTALVSTSAQGLVILLTWHDDNATVPITHTRIHRSDGQSYVSTLARFFADSNVKPGSTYTYTLWSSNVNGESAESAPAVVSVPGSKGSSSSAGAIAGAVITVLVVAATAIAAAFWYRRRRTLKARETMAEELAYIDMVTRSPEVADLELSHSRIRILDVIRRGDFGDILRVEMNSGTSQAAIACMKTLKLAAADAVDSLAVRHRFMTELNIARIVSNHTNVVGLLGVITKGDPNALLYQHPSLGDLRSYVQDPSKEIVLADLITFCIDIAKGLEHLVKCRIIHRHIMARNCMVFAGPRPVSMEESAWELGPKGNVVVKLGELSSACDAIHTDALPLPKGSTKWLAPEVLENNSRFSFASDMWAFAITLWEVMSFGAKPYAGISGEKNIAEHLKHGRRLPTPVGCPTTVYKLMSSCWNKNSEARPSISDLLRELQHHAYAKQAAIDTSVSGMHGIQLTEVRV* # ORIGINAL: g6360.t1 original gene structure, not modified by PASA NODE_395_length_24854_cov_40.5095 AUGUSTUS gene 9238 14112 . - . ID=g6360;Name=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS mRNA 9238 14112 . - . ID=g6360.t1;Parent=g6360;Name=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 13971 14112 . - . ID=g6360.t1.exon1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 13971 14112 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 13280 13855 . - . ID=g6360.t1.exon2;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 13280 13855 . - 2 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 12970 13057 . - . ID=g6360.t1.exon3;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 12970 13057 . - 2 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 12522 12708 . - . ID=g6360.t1.exon4;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 12522 12708 . - 1 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 12188 12301 . - . ID=g6360.t1.exon5;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 12188 12301 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 11872 12060 . - . ID=g6360.t1.exon6;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 11872 12060 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 11620 11774 . - . ID=g6360.t1.exon7;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 11620 11774 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 11342 11453 . - . ID=g6360.t1.exon8;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 11342 11453 . - 1 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 11013 11126 . - . ID=g6360.t1.exon9;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 11013 11126 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 10783 10884 . - . ID=g6360.t1.exon10;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 10783 10884 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 10603 10671 . - . ID=g6360.t1.exon11;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 10603 10671 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 10422 10496 . - . ID=g6360.t1.exon12;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 10422 10496 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 10117 10221 . - . ID=g6360.t1.exon13;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 10117 10221 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 9428 9738 . - . ID=g6360.t1.exon14;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 9428 9738 . - 0 ID=cds.g6360.t1;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS exon 9238 9313 . - . ID=g6360.t1.exon15;Parent=g6360.t1 NODE_395_length_24854_cov_40.5095 AUGUSTUS CDS 9238 9313 . - 1 ID=cds.g6360.t1;Parent=g6360.t1 #PROT g6360.t1 g6360 MGKMKKSTRNFIRKNLKNEIDRRKKSKKFQKKGPKEGTVAVPDVAEDVEGSDVSENGEGDEAVEDMDVDEFMNNLGDSDSDAAADERGDDSDAEEGDDAVGGGKNAAVSKPEKNAGDKGHKQQIAALKEKDPEFYKFLEENDKDLLEFDESDPESDAESEEEEEDVAEDDTDDVVVEKGKKAKGPKVITVAAVGAWAKAMEEQKSVTALRHAVSAFRALAQQSEGDDKDAGQFRADGSAAFNALVVAVVQKSAALLYEHLDYKIKDGASALPSASKKWPKAKGVVKTLVGSVLHFVRQLADPSMIAFVLRAIERLVPLYACYPKVARQLLKTLLKLWGSAEETVRVLAFLGVRRLALTLPMPFLDMCLKGLYLSFVRNAKFTTLKTLPAIAFMSNCVVELYGLDLHSSYQHAFVYIRQLAIHLRNAIVLKKKEANANVYNWQYIHCLRVWAQVLSVHSASGAHHSSILKPLIYPLVQVILGTIRLVPTAKYFPLRFHCVKALNMLSEATGTYIPVSPVLLEVLDSAEMKRKHRQTGGKPSDFSYLLKASKTQLQGKSFQDATMESLLGLLLEHFSINAHSIAFPELALPAVIQLRKFLKTSGQLKMKKQTKIVLDKLLESSKHISSRRTHLDFSPKDSNEVAKWVAAEATRNDNPLRKYYVQWKKAEDQRRALLLEDNGPPSRRDSRRDDDDDDEEQRDDDDNDDDDEEDDDVEEDDDVEDVDDDESDRPKNGGKRAKGESAPNKAKTGAAGAKSKGQSVAKKRKAADDASGQRKKAKKSVPLGDDDGDDGGDVVGDLVLSDDD* # ORIGINAL: g2174.t1 original gene structure, not modified by PASA NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS gene 2396 4116 . + . ID=g2174;Name=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS mRNA 2396 4116 . + . ID=g2174.t1;Parent=g2174;Name=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 2396 2496 . + . ID=g2174.t1.exon1;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 2396 2496 . + 0 ID=cds.g2174.t1;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 2808 2901 . + . ID=g2174.t1.exon2;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 2808 2901 . + 1 ID=cds.g2174.t1;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 3115 3219 . + . ID=g2174.t1.exon3;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 3115 3219 . + 0 ID=cds.g2174.t1;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 3516 3586 . + . ID=g2174.t1.exon4;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 3516 3586 . + 0 ID=cds.g2174.t1;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 3915 4116 . + . ID=g2174.t1.exon5;Parent=g2174.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 3915 4116 . + 1 ID=cds.g2174.t1;Parent=g2174.t1 #PROT g2174.t1 g2174 MPIIQPFGTGNLANLIAKACAQRDGTKRISMFAKMYPTELDCVIDANGSTLLMYSVRQNRNDIVRELLRSGARVDITDANGLTALEWAMRIGNTHAAGLLMQRDSESHTTDDIGSDRDDGMFDRRYSECEPTCTDTATDDGDECGRIVSEGMDWDLMFDMDDEYVAAAADSFAAPDASAETQSHMVSDGL* # ORIGINAL: g2175.t1 original gene structure, not modified by PASA NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS gene 4544 5576 . + . ID=g2175;Name=g2175.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS mRNA 4544 5576 . + . ID=g2175.t1;Parent=g2175;Name=g2175.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS exon 4544 5576 . + . ID=g2175.t1.exon1;Parent=g2175.t1 NODE_2638_length_5576_cov_34.5065_potentialcontaminant AUGUSTUS CDS 4544 5576 . + 0 ID=cds.g2175.t1;Parent=g2175.t1 #PROT g2175.t1 g2175 MMGQVSSAGHVRNAAPFAVTMAHSAAQQSQIPADLPQLTPTPRDQEAMSSFRRAASIRGVFAGNSLGINFGGGNTPVASRHPSLQYGTNNADQVDIPWHVLDDAGCSSMGISSPRPTTGATPTTVTLVTSEGSSTAMNCEYYSSASPAAVTARPRAGSERDGMVPGTPAIDWQQYDFGTGVSALRRERSSVSESEVSINSDYIASDSIAFYSHSYSGLDDDCMGNDYADRNCAGDNGNNVNYNNNNTNNNNNNNSGMKCDTGHRRASSLCSSLSGSIPSLIGAMLLDGGTLTTGNRHDPSAFDFDRNNAFNALGDNNNNSNNNNSNNTNNINSSNSKGESGALR # PASA_UPDATE: g9592.t1, single gene model update, valid-1, status:[pasa:asmbl_4125,status:12], valid-1 NODE_2358_length_6589_cov_39.9196 . gene 2931 5973 . - . ID=g9592;Name=g9592.t1 NODE_2358_length_6589_cov_39.9196 . mRNA 2931 5973 . - . ID=g9592.t1;Parent=g9592;Name=g9592.t1 NODE_2358_length_6589_cov_39.9196 . exon 5173 5973 . - . ID=g9592.t1.exon1;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . CDS 5173 5973 . - 0 ID=cds.g9592.t1;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . exon 4544 4948 . - . ID=g9592.t1.exon2;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . CDS 4544 4948 . - 0 ID=cds.g9592.t1;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . exon 4127 4369 . - . ID=g9592.t1.exon3;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . CDS 4127 4369 . - 0 ID=cds.g9592.t1;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . exon 2931 3910 . - . ID=g9592.t1.exon4;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . CDS 3044 3910 . - 0 ID=cds.g9592.t1;Parent=g9592.t1 NODE_2358_length_6589_cov_39.9196 . three_prime_UTR 2931 3043 . - . ID=g9592.t1.utr3p1;Parent=g9592.t1 #PROT g9592.t1 g9592 MSHLPQIKAAIRRLSIQERLTTTERVDDYDYSTTPSQSLYRRACGTNPNTPPTLVLDRSRLSREQRFTSIGAVKISHDHAHIAFVADATGTDATDGYVSRVDGTGRLVVDFIPGAAEVEWAADDSLFYTLRDGLNRPNRVYWRASKRENGNLEGGVASTQSRDVHDANAHIRRRTYGMAGERAGDALVFVELDESVFVALGLTKDKKFVTVNCNSKLSSEVRVIPSSRPCDVPTVVRAREAGVEYYVDHGSDGFRIVTNADGAYNYKIVHAPDADPSPHNWKDIVPHCEASKIDDVDFFAHFAAIYQRQDGLPSLRIVDMRSAAALTANAKKEKAEGVAVDSAPLMLSSSPSIGSCRHVTLPLEIGMIVPGANQTYDCDWLRFSMVGPLHPEVAIDYNMRTAESREVSHACIPDLSIDPGDYECVRVKVPSSVDTRVRIPLTLIRKKTHSAHGSGNASLPPQPLLIEVYGAYGQCTEPEYKPEHVALVSRGWTVALCHTRGGGELGFPWYNAGRMERKPNTFSDVVDCVLHAQEWSNATPSTTALHGVSAGGLAVAAALALRPDMAAAAVLRVPFLDVVGSMTNPELPLTVHEYDEWGNPNNPAILSAIRSYCPYTNVRSFVRAALSTKRGGDEDVPASLLPSLMVTTTMDDSRVAYWHAVKYIARLRDECRLVEAARKSTSTNGNSKQKVSFFGVPESPDADNREKRTDRSLILGVEGDGGHFGSDGLTGKSREVAFLHDALGVTWQQSATDATEGRGTDRKSNGRRRST* # PASA_UPDATE: g9591.t1, single gene model update, valid-1, status:[pasa:asmbl_4126,status:12], valid-1 NODE_2358_length_6589_cov_39.9196 . gene 174 2352 . + . ID=g9591;Name=g9591.t1 NODE_2358_length_6589_cov_39.9196 . mRNA 174 2352 . + . ID=g9591.t1;Parent=g9591;Name=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 174 329 . + . ID=g9591.t1.exon1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 174 329 . + 0 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 547 726 . + . ID=g9591.t1.exon2;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 547 726 . + 0 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 926 967 . + . ID=g9591.t1.exon3;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 926 967 . + 0 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 1141 1253 . + . ID=g9591.t1.exon4;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 1141 1253 . + 0 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 1469 1525 . + . ID=g9591.t1.exon5;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 1469 1525 . + 1 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . exon 1886 2352 . + . ID=g9591.t1.exon6;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . CDS 1886 2135 . + 1 ID=cds.g9591.t1;Parent=g9591.t1 NODE_2358_length_6589_cov_39.9196 . three_prime_UTR 2136 2352 . + . ID=g9591.t1.utr3p1;Parent=g9591.t1 #PROT g9591.t1 g9591 MSPQRTRVVWQVASVWANHECYPDLCRFALHLCGKIARAFPFVPSADEDSLTSLLRSLALRMAAHFGDQEIIDLLIAGFDDHKAGKTVLHPDLRSTAYRTAVSEGGEERYLQVLEIYRTADLHEEKVRALASLGAAKGIKNIRDILDFSLSSEVRSQDAFFPFRTLSDNKDAREPLWDFVREKWDELDRRFCAGNMNLIGRFISCATQSFTSDEKAKEVHAFFSVRNVPSAERTIAQSIEKIRLRAAWLKRDGEAVAQFVRDFKE* # ORIGINAL: g2739.t1 original gene structure, not modified by PASA NODE_19441_length_160_cov_16.3765_potentialcontaminant AUGUSTUS gene 1 160 . - . ID=g2739;Name=g2739.t1 NODE_19441_length_160_cov_16.3765_potentialcontaminant AUGUSTUS mRNA 1 160 . - . ID=g2739.t1;Parent=g2739;Name=g2739.t1 NODE_19441_length_160_cov_16.3765_potentialcontaminant AUGUSTUS exon 1 160 . - . ID=g2739.t1.exon1;Parent=g2739.t1 NODE_19441_length_160_cov_16.3765_potentialcontaminant AUGUSTUS CDS 1 160 . - 2 ID=cds.g2739.t1;Parent=g2739.t1 #PROT g2739.t1 g2739 RIRPNMWTWLCSGASTAASSRSWRRSCAGCRSLCPCRSSSDSTSRNLKWSSVD # PASA_UPDATE: g6550.t1, single gene model update, valid-1, status:[pasa:asmbl_2162,status:3], valid-1 NODE_1618_length_10168_cov_57.6781 . gene 2738 8635 . - . ID=g6550;Name=g6550.t1 NODE_1618_length_10168_cov_57.6781 . mRNA 2738 8635 . - . ID=g6550.t1;Parent=g6550;Name=g6550.t1 NODE_1618_length_10168_cov_57.6781 . five_prime_UTR 8454 8635 . - . ID=g6550.t1.utr5p1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 8286 8635 . - . ID=g6550.t1.exon1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 8286 8453 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 7693 8007 . - . ID=g6550.t1.exon2;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 7693 8007 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 7453 7555 . - . ID=g6550.t1.exon3;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 7453 7555 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 7003 7213 . - . ID=g6550.t1.exon4;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 7003 7213 . - 2 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 6783 6800 . - . ID=g6550.t1.exon5;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 6783 6800 . - 1 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 6445 6544 . - . ID=g6550.t1.exon6;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 6445 6544 . - 1 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 6082 6185 . - . ID=g6550.t1.exon7;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 6082 6185 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 5661 5735 . - . ID=g6550.t1.exon8;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 5661 5735 . - 1 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 4994 5258 . - . ID=g6550.t1.exon9;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 4994 5258 . - 1 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 4673 4787 . - . ID=g6550.t1.exon10;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 4673 4787 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 4406 4509 . - . ID=g6550.t1.exon11;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 4406 4509 . - 2 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 4131 4217 . - . ID=g6550.t1.exon12;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 4131 4217 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 3680 3931 . - . ID=g6550.t1.exon13;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 3680 3931 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 3241 3444 . - . ID=g6550.t1.exon14;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 3241 3444 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . exon 2738 3025 . - . ID=g6550.t1.exon15;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . CDS 2996 3025 . - 0 ID=cds.g6550.t1;Parent=g6550.t1 NODE_1618_length_10168_cov_57.6781 . three_prime_UTR 2738 2995 . - . ID=g6550.t1.utr3p1;Parent=g6550.t1 #PROT g6550.t1 g6550 MARDGYEPLITHGGEGYDDDDDPPPTHVEMGILDGADAPTQCGRQKWTDLDAFFTKVYNYFNGKGFLCILIGRVLNLAVLAFIVCFSVFLLAGIDYDVLFTTYDFSSAVDIRQLRRMNPAIIVGLVFFGVFWLWQLLALIADTRDLLEMRRFYSSELGIVEADMETVQWSEIVRRLCVVQEKKQMCIQKATLSAHDIANRIMRKENYLIALFNKEVLDISLTIPLLGRRIWLPKSLEWNISRAILDYVFDTKMSKVKDRFLHSERAPKLADGLRKRFMYLGAINLVLSPFILVFTSIYFFFRYFQEFRSQPNALGVRQWTPYARWRFREFNELPHIFQTRLNLSSRPAEKYLSRFSSQMLATIARFLAFVVGAFIATLTLMGAYDENFFIKVHLTQDRSVLFYLTVFGGIFAICRALIPPEDLVFDPEGLMRTVVFHTHYFPHSWRGKVHTHTVRDEFAQLYEFKIVLFLTEVFGVFITPFVLWFRLPKCSKQIVDFFKDFTVDEHGIGHVCSFALFDFKKHGNRMYGAPAPDVAPSDYQLTDQGKMEKSFINFKANNPEWQPSQEGQAFLGRLHTMNAIPPDAAGMGANSMSQSLLVGSDGRLVAVRSPLGLRGADTFARYDGIQVGGSVFFPPDLPRTPTFPVTSNPPTTSGETPTVLVDESTLRAGASARTNTLPGIPESMLASEGGSEVAYDHLGLSALLLERVYEMNAFGH* # ORIGINAL: g6551.t1 original gene structure, not modified by PASA NODE_1618_length_10168_cov_57.6781 AUGUSTUS gene 9096 10040 . + . ID=g6551;Name=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS mRNA 9096 10040 . + . ID=g6551.t1;Parent=g6551;Name=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS exon 9096 9263 . + . ID=g6551.t1.exon1;Parent=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS CDS 9096 9263 . + 0 ID=cds.g6551.t1;Parent=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS exon 9441 9569 . + . ID=g6551.t1.exon2;Parent=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS CDS 9441 9569 . + 0 ID=cds.g6551.t1;Parent=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS exon 9891 10040 . + . ID=g6551.t1.exon3;Parent=g6551.t1 NODE_1618_length_10168_cov_57.6781 AUGUSTUS CDS 9891 10040 . + 0 ID=cds.g6551.t1;Parent=g6551.t1 #PROT g6551.t1 g6551 MGHTVTAWLMALLVVALTLPNRGDATELTIVLDEHSTECFFEEVTEGGVYVLLEYQVIYGGRLDIDAQLISPSGNKVYASQKKQYDQYGFTADEIGEYKVCFGNEFSTFAHKTVYFDFQVGPEDPIIEKATALTLLESSTVNIHEALVK # PASA_UPDATE: g11214.t1, single gene model update, valid-1, status:[pasa:asmbl_2596,status:12], valid-1 NODE_1777_length_9303_cov_47.402 . gene 124 3059 . - . ID=g11214;Name=g11214.t1 NODE_1777_length_9303_cov_47.402 . mRNA 124 3059 . - . ID=g11214.t1;Parent=g11214;Name=g11214.t1 NODE_1777_length_9303_cov_47.402 . exon 2496 3059 . - . ID=g11214.t1.exon1;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . CDS 2496 3059 . - 0 ID=cds.g11214.t1;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . exon 2174 2293 . - . ID=g11214.t1.exon2;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . CDS 2174 2293 . - 0 ID=cds.g11214.t1;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . exon 1467 1693 . - . ID=g11214.t1.exon3;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . CDS 1467 1693 . - 0 ID=cds.g11214.t1;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . exon 124 1092 . - . ID=g11214.t1.exon4;Parent=g11214.t1 NODE_1777_length_9303_cov_47.402 . CDS 124 1092 . - 1 ID=cds.g11214.t1;Parent=g11214.t1;3_prime_partial=true #PROT g11214.t1 g11214 MMDESNLDACVDATDLRVEHITLEPTAVMYDDAADGRGFPVAAKPHRQPADDIAICGMSVDGTAEKGARLADRGRRSMQLAFRSLNYTVDVVGGGGGLFRRRPTETKHVLQDVSGVFGSTSGGELVSIMGQSGAGKTTLLNVLAQRASGKTEGDVFLNGVKNPSHRVIKRLAGYVEQEDCHFAQLTPREYLDFCASLRLPREIGREEREARVDDVLKELGLTAVANSQIGHVREKRGLSGGERKRLSIGSALITDPSIVFLDEYTSGLDSETALHVTELLQSLRSRGRLVIATIHQPSSDVFFRFDKLFLLSAGRVAYDGPVKDVVAHFAQIGAQFQCPAYYNPAEFVMKSVYCRDGDRVLSDHVSAFFPTSRAGAAVSALLDEIGSAHQASNECSTEASDAPVTSGGRRQIASKMRRQTSDARWREIVGATGGSAGAEAEPDGQIGFAAQLPLLMRRAYLLNARNRAVTRLKLIITVIMALIFGGIYFDRPSGQAGISDTNYLLFYSAIVVGVRTTIESVRVFIEERTIFLREHANGLYGVLPYFLAKSFVDLPFQVLSPLIFSAIVCPMTGLRMEDGRFFVFFSALALICLNATSIGLVLGAAITHEGMLMTCAPAVIFPTLLF # ORIGINAL: g11215.t1 original gene structure, not modified by PASA NODE_1777_length_9303_cov_47.402 AUGUSTUS gene 3826 8206 . + . ID=g11215;Name=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS mRNA 3826 8206 . + . ID=g11215.t1;Parent=g11215;Name=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS exon 3826 4996 . + . ID=g11215.t1.exon1;Parent=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS CDS 3826 4996 . + 0 ID=cds.g11215.t1;Parent=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS exon 5180 7689 . + . ID=g11215.t1.exon2;Parent=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS CDS 5180 7689 . + 2 ID=cds.g11215.t1;Parent=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS exon 8018 8206 . + . ID=g11215.t1.exon3;Parent=g11215.t1 NODE_1777_length_9303_cov_47.402 AUGUSTUS CDS 8018 8206 . + 0 ID=cds.g11215.t1;Parent=g11215.t1 #PROT g11215.t1 g11215 MRSQVGVLVLVLLLTTAVVAVSAHPVSQGNHLDAHVHVTADDRPSGATFAGRTASLENEGFIIHVRDVPMIPDRPMTETRLQRKTSRGDARQARSTSVDQVSGGRFPWPATVSNLVNGGGGSGLLTANCQTRLMSVAGHPASVVEFLAGNLDCCDAFILSISAYASSFYSSFWAAVVDTRVSVALFDSVAQVLSTANTLGFNATYVARFLADYPAMLQSAAINGVDISRWEALFYAPRSFSLLFACPSMPATLSNLQLLESLSYSSEDCTDVLGGVLGGRSATSRELDSLDYTSRHAPYDWTRRNALHTLGLFCGNISSSATNQLMLQTRRADVIALLESRILLETAEDPLKKAIEVMTSYFFPHLPLLQQLQNLTFNDAFSETIHVRAAASVVDLLMSKLLLETADVAFLIKGIAFGEDGVRPVVAFGCTDLYMMNKLNNTAYTEVRTAVETQFANGTCFPCRVWMARTLDKFDGSSNRFDALRTTFISAHLATTFHQATDSEVTIRTGLVDTPRLSCLIVMLMRQKAAFVDKMGPLFLTPVAIDDNVNTTLVIFASPERYADYMDAYIGFGGNADGLFVESQKTLYTYDRLSSASQLNLNQIVLREYARLLHAHYVFPRAPEFKDSMSDLRDPLGWADLGFAEYWASLTFDYAGRYRCPLRKDHLNLKCPVLPAALSLVRLLSLRIGHSRSHDLEFDFFSAYTFAAYMATYRVGATRKLFASFRNGTYSLANVSGICGVSVDVLEAEWRMSVRSWCADKNMFDHGTFKAPFTGLDTFKSCSLVEHGFPTDDTIKEKPFAVGFSFTDKNNCREQRSCQICKAVGGGGRCMWDGGLCRPIYNDRCPAPPPNVAIGKPCRANVPGAGNANDGDRNTFCYSASPIWWETDLLAIFIVETVVVSWRFPCTKFTISIIDVLTGVWHIVHTQMQPQAPFMGSVTCRLSIAAPCRFVRVDFLEGFFEMTEVQVFVRVPKEDPPSPVVPWKPPMFSPPPMQPESTSLPTFVVINTSHSVARPATRTPATSNLLPRTTTVLVGTSSTSPPSAVFISKSPSVPTVSPASTSSSVVTTFAEVSSSSSRATPVSSDDLIHFPSKLPSPAPFPPSSASIEPSSTTSLASSGTPPPLPASTGTVAPVNMPSVPPSPSDAPLGAAPGSFRVNLSPRVFLFGIPVQPSVTNPVPSTVVGTPNSSPLPTSLMFGPELKVTFPSHAIIPGTPASINNRLPSTGPTSIASSELSASLGEQSASADSVTVSIGPLPPSDSVTITTSLDFASSSETASVSTSGVAQFLP* # PASA_UPDATE: g4262.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3761,status:3], valid-1 # PASA_UPDATE: g4262.t1, single gene model update, valid-1, status:[pasa:asmbl_3763,status:12], valid-1 NODE_2208_length_7256_cov_39.3682 . gene 127 2917 . + . ID=g4262;Name=g4262.t1 NODE_2208_length_7256_cov_39.3682 . mRNA 127 2917 . + . ID=g4262.t1.1.5b6be70b;Parent=g4262;Name=g4262.t1 NODE_2208_length_7256_cov_39.3682 . five_prime_UTR 127 272 . + . ID=g4262.t1.1.5b6be70b.utr5p1;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . five_prime_UTR 475 631 . + . ID=g4262.t1.1.5b6be70b.utr5p2;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . exon 127 272 . + . ID=g4262.t1.1.5b6be70b.exon1;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . exon 475 2917 . + . ID=g4262.t1.1.5b6be70b.exon2;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . CDS 632 2656 . + 0 ID=cds.g4262.t1.1.5b6be70b;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . three_prime_UTR 2657 2917 . + . ID=g4262.t1.1.5b6be70b.utr3p1;Parent=g4262.t1.1.5b6be70b NODE_2208_length_7256_cov_39.3682 . mRNA 326 2917 . + . ID=g4262.t1;Parent=g4262;Name=g4262.t1 NODE_2208_length_7256_cov_39.3682 . five_prime_UTR 326 631 . + . ID=g4262.t1.utr5p1;Parent=g4262.t1 NODE_2208_length_7256_cov_39.3682 . exon 326 2917 . + . ID=g4262.t1.exon1;Parent=g4262.t1 NODE_2208_length_7256_cov_39.3682 . CDS 632 2656 . + 0 ID=cds.g4262.t1;Parent=g4262.t1 NODE_2208_length_7256_cov_39.3682 . three_prime_UTR 2657 2917 . + . ID=g4262.t1.utr3p1;Parent=g4262.t1 #PROT g4262.t1.1.5b6be70b g4262 MERQIRAAAEGSIETAAKIDAYEQEITKLNGVFDTTKKELTQVVSELTTTKVALKGVEENLVHTKENLDRTEKQREERDIVAKVRKDNEDTLRETATSLLGTVQETIVDVDALHEKIHRKSSVESANALSASQLREDLCASATALGDMTCAFSSSHAAAVADITANFDALSANANSSGIAITAAAKALSVAVVDRLESLRAAMASRLDAANAQSLVEAEHMQAMKSSLFSALGSISADIASALVDGIASAAESYRNKSAEMAEASRRAIRAGEKLVAEHTIRQRAHVAGIVEKSSALVAATHVSVDARRDEFSSLIAGKQAEYAAATKAAVEQMQATLALLEKTHMEALGEAVSAMSASSAQTKEEFSAMHAVMTETTSTISTDLDCLDEKVAAVYSHMASCIDAHESAADGHVAATVAKTEETKTSCEHSLSAVETAFNAHFMHASELTSDAHKAWCEAVDANGTSIDVVSTAVLDGTNRIASDSADAAALLASGASKGVTAASEIQSMASAFKDDHTAAVAGVSARVEAYILRELSADVPTGRTPKKRAYNYARHVPSPKIDEEILSNYRSGVRTMSLEGDCPSDAESGDCTASAVEHSAPASVAATVAVVADDKENEDAAVVCADDATTSLLNSSLSRLPVARRKPSVRGKSVKDADSQKPLETINNTITA* #PROT g4262.t1 g4262 MERQIRAAAEGSIETAAKIDAYEQEITKLNGVFDTTKKELTQVVSELTTTKVALKGVEENLVHTKENLDRTEKQREERDIVAKVRKDNEDTLRETATSLLGTVQETIVDVDALHEKIHRKSSVESANALSASQLREDLCASATALGDMTCAFSSSHAAAVADITANFDALSANANSSGIAITAAAKALSVAVVDRLESLRAAMASRLDAANAQSLVEAEHMQAMKSSLFSALGSISADIASALVDGIASAAESYRNKSAEMAEASRRAIRAGEKLVAEHTIRQRAHVAGIVEKSSALVAATHVSVDARRDEFSSLIAGKQAEYAAATKAAVEQMQATLALLEKTHMEALGEAVSAMSASSAQTKEEFSAMHAVMTETTSTISTDLDCLDEKVAAVYSHMASCIDAHESAADGHVAATVAKTEETKTSCEHSLSAVETAFNAHFMHASELTSDAHKAWCEAVDANGTSIDVVSTAVLDGTNRIASDSADAAALLASGASKGVTAASEIQSMASAFKDDHTAAVAGVSARVEAYILRELSADVPTGRTPKKRAYNYARHVPSPKIDEEILSNYRSGVRTMSLEGDCPSDAESGDCTASAVEHSAPASVAATVAVVADDKENEDAAVVCADDATTSLLNSSLSRLPVARRKPSVRGKSVKDADSQKPLETINNTITA* # ORIGINAL: g4263.t1 original gene structure, not modified by PASA NODE_2208_length_7256_cov_39.3682 AUGUSTUS gene 3298 5467 . + . ID=g4263;Name=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS mRNA 3298 5467 . + . ID=g4263.t1;Parent=g4263;Name=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 3298 3396 . + . ID=g4263.t1.exon1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 3298 3396 . + 0 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 3578 3627 . + . ID=g4263.t1.exon2;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 3578 3627 . + 0 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 3876 3996 . + . ID=g4263.t1.exon3;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 3876 3996 . + 1 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 4177 4318 . + . ID=g4263.t1.exon4;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 4177 4318 . + 0 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 4668 4742 . + . ID=g4263.t1.exon5;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 4668 4742 . + 2 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 4910 5056 . + . ID=g4263.t1.exon6;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 4910 5056 . + 2 ID=cds.g4263.t1;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS exon 5433 5467 . + . ID=g4263.t1.exon7;Parent=g4263.t1 NODE_2208_length_7256_cov_39.3682 AUGUSTUS CDS 5433 5467 . + 2 ID=cds.g4263.t1;Parent=g4263.t1 #PROT g4263.t1 g4263 MALDTKSVHSMLAGIERYNPKHIAVLETYVQQQVATGTYDFEANLALLKLYQFNPKQFNVAVVTNILLKALANLPTTDFIMSLFLIPESYHEDEQIGRVMHLSQLLETAHFRDFWAEIADTPELVEHVAGFPNSIRKYIGYILSITYQSIGKNLLSGLLNLEGEALDKFIAGIEAWKVETDANSNKPFVSLGLNRDNQSKAKSQVESIDFTALTRVLASSAI* # PASA_UPDATE: g4264.t1, single gene model update, valid-1, status:[pasa:asmbl_3762,status:12], valid-1 NODE_2208_length_7256_cov_39.3682 . gene 6037 7058 . - . ID=g4264;Name=g4264.t1 NODE_2208_length_7256_cov_39.3682 . mRNA 6037 7058 . - . ID=g4264.t1;Parent=g4264;Name=g4264.t1 NODE_2208_length_7256_cov_39.3682 . five_prime_UTR 6999 7058 . - . ID=g4264.t1.utr5p1;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . exon 6939 7058 . - . ID=g4264.t1.exon1;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . CDS 6939 6998 . - 0 ID=cds.g4264.t1;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . exon 6661 6807 . - . ID=g4264.t1.exon2;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . CDS 6661 6807 . - 0 ID=cds.g4264.t1;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . exon 6037 6381 . - . ID=g4264.t1.exon3;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . CDS 6229 6381 . - 0 ID=cds.g4264.t1;Parent=g4264.t1 NODE_2208_length_7256_cov_39.3682 . three_prime_UTR 6037 6228 . - . ID=g4264.t1.utr3p1;Parent=g4264.t1 #PROT g4264.t1 g4264 MAKATSFYKNVLGGKVSAQVAQPDHGVYTVFVDLGNTKIELLHPYGDNSPIQNFLDKNASGGMHHICIEVDDINKAIKDLQEKKIRTLTKEAKIGAHGKPVVFLHPKDCHGVLVELEQA* # ORIGINAL: g10016.t1 original gene structure, not modified by PASA NODE_6964_length_486_cov_233.046 AUGUSTUS gene 2 486 . + . ID=g10016;Name=g10016.t1 NODE_6964_length_486_cov_233.046 AUGUSTUS mRNA 2 486 . + . ID=g10016.t1;Parent=g10016;Name=g10016.t1 NODE_6964_length_486_cov_233.046 AUGUSTUS exon 2 486 . + . ID=g10016.t1.exon1;Parent=g10016.t1 NODE_6964_length_486_cov_233.046 AUGUSTUS CDS 2 486 . + 0 ID=cds.g10016.t1;Parent=g10016.t1 #PROT g10016.t1 g10016 APSSRNPALDEERYALDPATLLPHGVNLSPDVLACLTANEAQELRWTLQEYVDTFVPKSGKPGRTDVTTFKIDTGNHPPICVPPRRYSFKEHDAMTAQTTTNRGHGLVEPAYANPWAFRAVMADKPDGSLRFCIDYRRLNNITVGDAYPLPRIDDMLASLA # ORIGINAL: g340.t1 original gene structure, not modified by PASA NODE_2386_length_6461_cov_35.4168 AUGUSTUS gene 390 6286 . + . ID=g340;Name=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS mRNA 390 6286 . + . ID=g340.t1;Parent=g340;Name=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 390 448 . + . ID=g340.t1.exon1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 390 448 . + 0 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 706 1057 . + . ID=g340.t1.exon2;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 706 1057 . + 1 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 1210 1339 . + . ID=g340.t1.exon3;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 1210 1339 . + 0 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 1604 3399 . + . ID=g340.t1.exon4;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 1604 3399 . + 2 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 3700 4346 . + . ID=g340.t1.exon5;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 3700 4346 . + 0 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 4644 5939 . + . ID=g340.t1.exon6;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 4644 5939 . + 1 ID=cds.g340.t1;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS exon 6142 6286 . + . ID=g340.t1.exon7;Parent=g340.t1 NODE_2386_length_6461_cov_35.4168 AUGUSTUS CDS 6142 6286 . + 1 ID=cds.g340.t1;Parent=g340.t1 #PROT g340.t1 g340 MFDKASMKLGLDKAVLENMRSNVNNTPDENGGSSRSSALLTKDEIESYLKRGAYGAIMDESNDAGAKFCEEDIDQILERRTTVVRTDPTGKGSSFAKATFNVTQKGPSIDVDDPEFWAKWAQAANVNTAEAAWDETETLIIDAPRRRRQVDRLGFRPDEFEGFGGMFDEFGQQDVPAAASGGSSDDRWGAKERFLFERALLRFGFGRWREILSAGARKENMTPRDVQNICTAILRIGAEFATGDEKLASFAQSISSVTEAETAEEARRRRAFTEDKSYKKHIEKCVSKILLRIRLLHQVRSMVTGLTTFSGEPASPDIGLEYDRITFVSEELLMERLPPTEQLVLPVGADWWTKKSDIALLCGVYKHGFEHYDMMFSDPSLDFGVPDEIKKSAAAAAAAAAAAAAASVSMPAGDAAVVGDAAPNAADDVERKGKELGDGGGTNDTSMDVGDAGDAMREDAGMDENGEDSEMPAATAVAYRPHTAELNQRLRRVAAMMREQELRREAAEERDRLKGVRWEEKALEKERMRLVKAQKWNKREETDFLRAVMGLGIPSPILPMLGPDVTLYYQQNPHVTMPGKRRGRPPRDAFDFGGDVVARDGAVSVAPSSLLTTEERAALDPARINGGTVSGHVVLDPSFGLRDWTTFRKVAGLERKSDETLDRYAAEFVAVCKNLAKMAKKSTGKDKGEDGASQDIGATSGAGESASASLFGESVPGAKSQNGDGRDGTQPEDGSGEGAGDAQSTGVLREQLNPDKAVKMLRRIELLGTVREKVLTNPHMLDHTRHIPRQHDVPSWWEIGNHDCDLVKGVSAHGLNRSDLIIGDETLGFMRAVEKVRSFADSIPVPPVTTTTFTAEGASSPHLDGGQDEVTAADAADVSMKEERDDGVKTEGEVAAENEGALEDAGASEGAGLSDTPRPPVSAAGALLPPSVLLNWPKEKKLVARLERIMRACIFPKPTRLTLKPLRPPTLEELSAVDGKRKRKGKKRRRDSVRKHEGDAADADADAGDFQSDGPPKKKRRTTKGRQGREGAEGDERPKKQRRSGGGRKKKGEEQEADGDANNNNNGDEDSLATDTPAKKKRRSKKRPTEDAGEDGAGDAENKSEETGGDGQTVKRKRKSPKRSKAAAEDAGEGAEGDGDDDAPVKKRRTPKRKRTDADADADADPNKEGEADSGAATPATTKKRGRKSTTPKSKAAATPNDGHDDDAWESALTSIEAQGIDDAGVADENAAGPPKQKRRPRQPRQPKTPKGGASGAVEGAEAVAGDDAESEATPKARGKGKMKAAAHGDGGSVVEDGRKRKVTHEGGAGSGRDSPAPPPQKRARVELSSSDGSATSSESESGSESASEMSVRPPKPRGRPKGSKVHHVSQMDQRPAPSPTGTRNAKSREDAVRLDESGNVVFPMKISSITFLSLGDVVYDRDGFHSDKYIWPVGFKSQKEFPSMVHPTKRTIYTSEIIDIGGPVPMVCCCEGC* # PASA_UPDATE: g6961.t1, single gene model update, valid-1, status:[pasa:asmbl_5733,status:12], valid-1 NODE_3219_length_3981_cov_39.7995 . gene 103 3860 . - . ID=g6961;Name=g6961.t1 NODE_3219_length_3981_cov_39.7995 . mRNA 103 3860 . - . ID=g6961.t1;Parent=g6961;Name=g6961.t1 NODE_3219_length_3981_cov_39.7995 . five_prime_UTR 3794 3860 . - . ID=g6961.t1.utr5p1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 3410 3860 . - . ID=g6961.t1.exon1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 3410 3793 . - 0 ID=cds.g6961.t1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 3125 3240 . - . ID=g6961.t1.exon2;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 3125 3240 . - 0 ID=cds.g6961.t1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 2403 2877 . - . ID=g6961.t1.exon3;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 2403 2877 . - 1 ID=cds.g6961.t1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 914 2232 . - . ID=g6961.t1.exon4;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 914 2232 . - 0 ID=cds.g6961.t1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 499 772 . - . ID=g6961.t1.exon5;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 499 772 . - 1 ID=cds.g6961.t1;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . exon 103 255 . - . ID=g6961.t1.exon6;Parent=g6961.t1 NODE_3219_length_3981_cov_39.7995 . CDS 103 255 . - 0 ID=cds.g6961.t1;Parent=g6961.t1;3_prime_partial=true #PROT g6961.t1 g6961 MKRLVIMPDSAFARLWHPLRVALTCIGAITITYQAAFVPTSVGLWVFNYLMDCAYLLDIYLCFRLAYTSRAGLQIIDVGQISRQYLRTDFAWDFLASFPFDFFALAYSSNRLEILALFRLNRILKLVKVPHYYTKLESRLNANISFYRIVKNTIYIVIFTHFAACAWFLTACAFDCRNESWATEELITADSARFRKYLYSLYWAVTTMTTTGLGDIIPKSNAERVIALLAMLVGTMMYNFVLAAIAATLANDELQRVRFQEKLRAIRTFMSEQKLLPALRKRVIDYLEYLWKRNRGMDAHKLLSDLPLTLQAEVSLKINQKILEKVPLFQGAEIGFLRLLSLSIKSYLFLPNEYILYRGDIGREMYFIHRGSVEVMSDDGQSVIASLSAGSFFGEIGLLFSVPRTSSIRASTHCDVFMLTKDDLDNVLEAFPQIAKQVNDIANDREHLDALRKTIAELSELANQMPQPIKSTSTATLTFKKVSRVEQAPLNFSADASRGSQPLLRKKSHGSMGGADLTGEAPDEAVGDVPLSTESADVVRIPTHLLGSNKVAPMDTISARRARRHLEHQNRNAWTRLASKVMLPYTIIPQSKLRRAWQVAMVAFGVITAITVTIQASFAAQAEGLIVFNYILDLLFIIDMLVSAHTAFFNEKGVLVTHPLATAHHYIRTNFLLDFVAFIPTDVFCLTVTSSMHTRLSVLGLLRLNRVLRVYKAQQFFAYLESKISAKTEELRTFRFIVFITLFVHWLTCIVFLTACYDDTCDIGSWAGGLNDSSFGHRYIICMYWVVTMICNVGYGDITASTDGERILATFIMVAGIIFFGFITASIAAALANADAQRSLYQEKLNAIMDFMREAQLEDSLQLRVKKYYEYLWRRNRGVNARSLFQDLPLTFQGDVCLSIYQSIIEK # ORIGINAL: g3157.t1 original gene structure, not modified by PASA NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS gene 251 2071 . - . ID=g3157;Name=g3157.t1 NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS mRNA 251 2071 . - . ID=g3157.t1;Parent=g3157;Name=g3157.t1 NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS exon 1207 2071 . - . ID=g3157.t1.exon1;Parent=g3157.t1 NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS CDS 1207 2071 . - 0 ID=cds.g3157.t1;Parent=g3157.t1 NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS exon 251 1110 . - . ID=g3157.t1.exon2;Parent=g3157.t1 NODE_3698_length_2931_cov_43.7829_potentialcontaminant AUGUSTUS CDS 251 1110 . - 2 ID=cds.g3157.t1;Parent=g3157.t1 #PROT g3157.t1 g3157 MHVEDPVQLSGELRRRLDARRLLLILDDVWDARTLSLLSVTPVVLVTSRTAFDCNTGDNIHTFHLDVLVEDEAVHLMSLLLGDSPDAVRGDVYAMQLFNAAGRHPLALALISSLKARTKTTWRRLADAGLGGLMKMDTSKLMRRGGSERGRSEFFRVVFEATVSHLSDCERSCFFDLVQLREDEAIPEAVLRLLWQSASDGLDDPWSVEGVETLDALIGLSLLERGADERGARTVRLHDLTREYLAFRMAADGNLGRGALVAHQLIVAYNGISRRDACSIAIHEECPESLNDRLGTSVLDAAWLYFRVNSRDAERLVTARVSGLQHDLHCLSEYSEAVGLLERAVRLCRIAICAHPQLILDALHQHLASLAVIPLSFRHPIDAMRKQGGCWHISGSVYEPPGALMSTIRITSASEDGRVAGVAVVNVGDIPHIAMVTFPARPMCIWNSETGEARADIVPPLSSHNVAHSVTSTASGIVVFAGSLLVRAFRPGDPNLLWEERVPMVGPDGLYPPENMAHSTRIATVLAVSDNLVVGWGPHFFFRWNIATNVRSFEHGQFENVTGYVEIGSFTVLS* # PASA_UPDATE: g4380.t1, single gene model update, valid-1, status:[pasa:asmbl_6606,status:12], valid-1 NODE_3817_length_2690_cov_20.7067 . gene 1042 2690 . - . ID=g4380;Name=g4380.t1 NODE_3817_length_2690_cov_20.7067 . mRNA 1042 2690 . - . ID=g4380.t1;Parent=g4380;Name=g4380.t1 NODE_3817_length_2690_cov_20.7067 . five_prime_UTR 2690 2690 . - . ID=g4380.t1.utr5p1;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . exon 2558 2690 . - . ID=g4380.t1.exon1;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . CDS 2558 2689 . - 0 ID=cds.g4380.t1;Parent=g4380.t1;5_prime_partial=true NODE_3817_length_2690_cov_20.7067 . exon 2236 2327 . - . ID=g4380.t1.exon2;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . CDS 2236 2327 . - 0 ID=cds.g4380.t1;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . exon 1845 1980 . - . ID=g4380.t1.exon3;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . CDS 1845 1980 . - 1 ID=cds.g4380.t1;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . exon 1042 1485 . - . ID=g4380.t1.exon4;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . CDS 1339 1485 . - 0 ID=cds.g4380.t1;Parent=g4380.t1 NODE_3817_length_2690_cov_20.7067 . three_prime_UTR 1042 1338 . - . ID=g4380.t1.utr3p1;Parent=g4380.t1 #PROT g4380.t1 g4380 NAVAKRPEIDLYPAELRGEIDAVNAWVYDSINNGVYKCGFATTQAAYDEAIEELYAGLARAESILSKKRFLAGNRLTEADIRLFVTLIRFDEVYVVHFKCNRATVREYPALFGYIHDIYQTNGIATTVNMTHIKNHYYGSHPQLNPRGIVAAGPNIDYTKPHTRATLP* # ORIGINAL: g4379.t1 original gene structure, not modified by PASA NODE_3817_length_2690_cov_20.7067 AUGUSTUS gene 2 521 . + . ID=g4379;Name=g4379.t1 NODE_3817_length_2690_cov_20.7067 AUGUSTUS mRNA 2 521 . + . ID=g4379.t1;Parent=g4379;Name=g4379.t1 NODE_3817_length_2690_cov_20.7067 AUGUSTUS exon 2 521 . + . ID=g4379.t1.exon1;Parent=g4379.t1 NODE_3817_length_2690_cov_20.7067 AUGUSTUS CDS 2 521 . + 1 ID=cds.g4379.t1;Parent=g4379.t1 #PROT g4379.t1 g4379 RRRLQVLHNQNETETGTSLVTVAQYHSPSAADYWTTIASVFSDKSDYALCAVVGLACAASGGCGAGVGTVAMADCFDAGNATHFVGVGDECTRNGFAELRPLGFAAVEPPPVARLVQRSGVAGDMLSPTLLVRCAAVSPAGRWSYRVFRSACNPGWGAPVSIGYVYCDHDAC* # PASA_UPDATE: g879.t1, single gene model update, valid-1, status:[pasa:asmbl_1954,status:3], valid-1 NODE_1555_length_10497_cov_56.1386 . gene 1636 6955 . - . ID=g879;Name=g879.t1 NODE_1555_length_10497_cov_56.1386 . mRNA 1636 6955 . - . ID=g879.t1;Parent=g879;Name=g879.t1 NODE_1555_length_10497_cov_56.1386 . five_prime_UTR 6247 6955 . - . ID=g879.t1.utr5p1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 4929 6955 . - . ID=g879.t1.exon1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 4929 6246 . - 0 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 4521 4722 . - . ID=g879.t1.exon2;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 4521 4722 . - 2 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 4151 4294 . - . ID=g879.t1.exon3;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 4151 4294 . - 1 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 3825 3963 . - . ID=g879.t1.exon4;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 3825 3963 . - 1 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 3105 3636 . - . ID=g879.t1.exon5;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 3105 3636 . - 0 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 2793 2945 . - . ID=g879.t1.exon6;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 2793 2945 . - 2 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . exon 1636 2538 . - . ID=g879.t1.exon7;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . CDS 1844 2538 . - 2 ID=cds.g879.t1;Parent=g879.t1 NODE_1555_length_10497_cov_56.1386 . three_prime_UTR 1636 1843 . - . ID=g879.t1.utr3p1;Parent=g879.t1 #PROT g879.t1 g879 MEEDRGNRTPPPGSPVLSLSQQRRRMQLNDDDEDGGDVRRMSIVEGEGEGSAPMRMSISMAATDTARVDTAGSEAGASSADVAMDPPLSANPRASAEWGDVNGFVNFFQHQTENISHFIAPLDERDKGASSDRDDRRSPSLEAPSTPSPAPHPKDTSTVGPNAHSAQSVESRGIRHQSSAYGPQAKDVEAAEWMRRQGYAPVSLGSSPPTYRSVPPGQSGYYTWHVGPPPPVLHVGGMQAALGVKLDHSSQDMHRAQVESHNAGAHFEAYDRRRTTSESSSGGADDQRSTGNNQQQLPQHPQQQSRTVGGLAAGVPTSLGFHGLSYEGGYAPARFGYGPDVRPIMAYGGWSHASPPDDGMYRARGGSGYGDGHAWPECSQYFPPPPSMEFPLRKTSSEPNIRGKSAGGNAAKAAGRQLKVLSGRDGHEPYSRARQRQQSTSTSEFGATGFHSATSTPVQSQPTTPRSAPTTPRYGQFRQHQLEEANHKFSHADDSQLWTSPSLPNLSTSPSGSTGILNAGPDQTGIVYDSVVLLHKCTCPRAAEVHGEVPERLQSVYMRLSERGLLQRCHRIKARKATLKELYAIHSEAHTVMYGTPSQSQAVKFVDKKVGAAKASAGSPSLVRLPCGGQGISTGLDSETYWNEEHSALAVRTAAGSVVELATKVARGELRNGVALVRPPGHHAERGRALGGCYINNVAVAAKALRKSAGVNRVMVVDWDLYHGNGTQEAFYKDPSVLFVSLHKSENVTVFPFTGRMAETGLGGGEGYTVNIPWSNCEDTLLGDSEYLAAFRSVVIPIARHFSPEIILVSAGFGAADGPERGGYSVSPAGFAHMTRMLMRICDGRVVLCLEGGASSPSLSACMDACVASLLGDPLPDLPPAANTKRPCDAAVRILADVSATHRRHWPILGTTGDMIARSPAEAVERERTEEAETLAATEALASLAMNMPPSAVAASPTSGHSTPVSVGVGMASSQQMQNSSGASCGGARDFANAHVMSGGPIQRNSNGGSAAQGIRGSPVKGLSSRSPRLTVDVGAGIAQSGVAMQSLAVAAALVDFSRE* # ORIGINAL: g878.t1 original gene structure, not modified by PASA NODE_1555_length_10497_cov_56.1386 AUGUSTUS gene 132 1301 . + . ID=g878;Name=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS mRNA 132 1301 . + . ID=g878.t1;Parent=g878;Name=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 132 288 . + . ID=g878.t1.exon1;Parent=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 132 288 . + 0 ID=cds.g878.t1;Parent=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 567 687 . + . ID=g878.t1.exon2;Parent=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 567 687 . + 2 ID=cds.g878.t1;Parent=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 1133 1301 . + . ID=g878.t1.exon3;Parent=g878.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 1133 1301 . + 1 ID=cds.g878.t1;Parent=g878.t1 #PROT g878.t1 g878 VDKLRLDINAGRISAIESAEVHVSAGVLKMFLRDLSSRLIPGKAGDRAIASAALLLTGGCSPEAAAEDVCRIASELPPPNKATITSLVNHWRTIVAHSDNNAMGPPNLGTVFGPNILESKAPLTDISAVAKESACQAKVVELLIAGWQ* # ORIGINAL: g880.t1 original gene structure, not modified by PASA NODE_1555_length_10497_cov_56.1386 AUGUSTUS gene 8005 10164 . + . ID=g880;Name=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS mRNA 8005 10164 . + . ID=g880.t1;Parent=g880;Name=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 8005 8413 . + . ID=g880.t1.exon1;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 8005 8413 . + 0 ID=cds.g880.t1;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 8662 8864 . + . ID=g880.t1.exon2;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 8662 8864 . + 2 ID=cds.g880.t1;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 9034 9211 . + . ID=g880.t1.exon3;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 9034 9211 . + 0 ID=cds.g880.t1;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS exon 9437 10164 . + . ID=g880.t1.exon4;Parent=g880.t1 NODE_1555_length_10497_cov_56.1386 AUGUSTUS CDS 9437 10164 . + 2 ID=cds.g880.t1;Parent=g880.t1 #PROT g880.t1 g880 MKLFRKDKGDKGDKDEKASTSLALPSHAQSSRPGERRLSVTPTKSEPMAPPLERRTTADNLVAATSAAPAPTKDPRLAASASAGAIPSKGSPSHQHAHRRRSSVADHSRHKSKSVTDSADLERLTGHVRKFHAAVTGLDGSFSASPIVHAACISSFASLVAAIKELAGAFQISSTEINANAAALGKLIRDLDAENPVRPVGYDEVSAALRGSLVTCLQEYLMGFAEGAAESGDYDSDDISEDDADLAGFLLLDGVDLLVNRAKGWAEYSAEVLNFIEKRTQLELEYSKGLAKLARKTQEALAEQTFLVGSSFNDSFHQILKYAESGASRRLDYATKVTQLVQEPLSVKRAENDKSRRQIRDQWLKEQKRFTDTTSAASRARQKYHEAAHALETLAADRTAKGGARIADNDERRKALVTTEEAYKGHVATANRVTLEYESFEKTLLRTLRRLNEECEQKTREVVIKMVSFERAMLSPSPAEIERCVSLAQDTDPIGDVRKHVRCVR* # ORIGINAL: g8062.t1 original gene structure, not modified by PASA NODE_1978_length_8232_cov_55.8379 AUGUSTUS gene 4012 5835 . - . ID=g8062;Name=g8062.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS mRNA 4012 5835 . - . ID=g8062.t1;Parent=g8062;Name=g8062.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 4012 5835 . - . ID=g8062.t1.exon1;Parent=g8062.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 4012 5835 . - 0 ID=cds.g8062.t1;Parent=g8062.t1 #PROT g8062.t1 g8062 MKPTDLETGAGAAAKQGTKDKKRKREDVTEDADKEEKKKDKKRSKVEESDDMQGVKSNAGADADAEEEERRRRKEKKQAKKEKKRAQKQKKASAAFSAATSDLSSSEEDKKSKDVEMPEAAPPVKKVAPATPKAQPQQAKPAAAATSSSTAFRRDFYTEHPDTTKLSAAEITSFREAQSIHVHGSTHKPILAFSASTFAKNLLKPCEGFERPTPIQSETWPLALSGRNVIGIAATGTGKTIAFLLPGLVHLLDQVQKGGKKTRKGPILLVLSPTRELAMQIAEVASVAGAACGVKSVCVYGGVDKGPQRQALRSGVEMCIATPGRLLDLIEEGVCDLSNVTYAVLDEADRMLDLGFERDVRTILAKVRQDRQTLMFSATWPQSVQALASEFLGSTPARVTVGSAELCASHAVTQIVEVLDVRDKERRLLELLKKYHSSRKNRVLVFVLYKAESGRIERMLASHGWKAQAISGDRTQAERTRALATFKDGTCPLLIATDVAARGLDIPEVEAVLNFTFPLTIEDYVHRIGRTGRGGATGIAHTLFTVNDKSHSGELVNVLREANQTVPDALMKFGTHVKRKEHKMYGAHYKGDEDGQPMKEKIHVKFD* # PASA_UPDATE: g8063.t1, single gene model update, valid-1, status:[pasa:asmbl_3152,status:12], valid-1 NODE_1978_length_8232_cov_55.8379 . gene 6220 8083 . + . ID=g8063;Name=g8063.t1 NODE_1978_length_8232_cov_55.8379 . mRNA 6220 8083 . + . ID=g8063.t1;Parent=g8063;Name=g8063.t1 NODE_1978_length_8232_cov_55.8379 . five_prime_UTR 6220 6247 . + . ID=g8063.t1.utr5p1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 6220 6374 . + . ID=g8063.t1.exon1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 6248 6374 . + 0 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 6464 6619 . + . ID=g8063.t1.exon2;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 6464 6619 . + 2 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 6735 6851 . + . ID=g8063.t1.exon3;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 6735 6851 . + 2 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 6984 7085 . + . ID=g8063.t1.exon4;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 6984 7085 . + 2 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 7208 7461 . + . ID=g8063.t1.exon5;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 7208 7461 . + 2 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 7603 7725 . + . ID=g8063.t1.exon6;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 7603 7725 . + 0 ID=cds.g8063.t1;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . exon 7925 8083 . + . ID=g8063.t1.exon7;Parent=g8063.t1 NODE_1978_length_8232_cov_55.8379 . CDS 7925 8083 . + 0 ID=cds.g8063.t1;Parent=g8063.t1 #PROT g8063.t1 g8063 MDRAQVTRDVWALTDTLVSVPSASRDKAQNRSCLAIVADYFAGTRWHLTHFSKGPEASPMVYITSTLNGPSARFSKLLFLGHVDVVPHAEYRMQGSPEGIVTGRGVSDMKGPVACMMHMMKQMNPDEVDLAMLVVTDEEIGGIDCAKFAFADDDGPKISCDLCVCPDGGDNFKLVTHEKGVFRLGLTADGKAAHSAYPWNGTNAIQMVMDDIAALQRLTHDGKPLFDNEGPVTHWNSTVVPTIIQGGDVINQVPGKATAKVDIRFTEKWNLQSLRDVVLPAVTRCKCEVVFEQPMFHSPPEAQFMVDAKAVIEKVTGSPIQYSRGHGTSDVHWAPFPAGAVPIGL* # ORIGINAL: g8060.t1 original gene structure, not modified by PASA NODE_1978_length_8232_cov_55.8379 AUGUSTUS gene 301 473 . - . ID=g8060;Name=g8060.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS mRNA 301 473 . - . ID=g8060.t1;Parent=g8060;Name=g8060.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 301 473 . - . ID=g8060.t1.exon1;Parent=g8060.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 301 473 . - 0 ID=cds.g8060.t1;Parent=g8060.t1 #PROT g8060.t1 g8060 MERDSITTASSEGDVDGDSPKNGSSVTTKSEHECVICFEELGSRRRIDVTLTCGHIF # ORIGINAL: g8061.t1 original gene structure, not modified by PASA NODE_1978_length_8232_cov_55.8379 AUGUSTUS gene 988 2873 . + . ID=g8061;Name=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS mRNA 988 2873 . + . ID=g8061.t1;Parent=g8061;Name=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 988 1527 . + . ID=g8061.t1.exon1;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 988 1527 . + 0 ID=cds.g8061.t1;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 1669 1833 . + . ID=g8061.t1.exon2;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 1669 1833 . + 0 ID=cds.g8061.t1;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 1968 2042 . + . ID=g8061.t1.exon3;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 1968 2042 . + 0 ID=cds.g8061.t1;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 2414 2644 . + . ID=g8061.t1.exon4;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 2414 2644 . + 0 ID=cds.g8061.t1;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS exon 2793 2873 . + . ID=g8061.t1.exon5;Parent=g8061.t1 NODE_1978_length_8232_cov_55.8379 AUGUSTUS CDS 2793 2873 . + 0 ID=cds.g8061.t1;Parent=g8061.t1 #PROT g8061.t1 g8061 MDPIALEAQEVAVCPAPRTASPYDGGGDDAEGDRLAKRQRLREHKRRQQGRRRKEESHRGLQVLSNLVASLFPDTTDGCGLSAPVSIGDVAIDDDDEDGPLDALALSIVGRIERLSNSAYSALSEDSGGVTINWGEIPPPVDISVEKDGKGGCRSQRKRWQADSFAALLAPLVKDGDVIVDFGSGSGNFSLPLAFAFPKCRFILVDLRQQALDIAADKARRAGLQNVSTRTCLIQDYNDPFDVCISLHACGNASDYAQVQHSVDHLEGKEVPEFTKVGAKQLEEGKTTEMDNHRGGAVCVELTHPRSIWLAKHINHDSFRQLAAAADWSDYDFGTKETEWRRMCKMVIELDRNAAAKEIGYST* # ORIGINAL: g1356.t1 original gene structure, not modified by PASA NODE_2071_length_7853_cov_39.8095 AUGUSTUS gene 6781 7395 . + . ID=g1356;Name=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS mRNA 6781 7395 . + . ID=g1356.t1;Parent=g1356;Name=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS exon 6781 6882 . + . ID=g1356.t1.exon1;Parent=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS CDS 6781 6882 . + 0 ID=cds.g1356.t1;Parent=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS exon 7044 7146 . + . ID=g1356.t1.exon2;Parent=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS CDS 7044 7146 . + 0 ID=cds.g1356.t1;Parent=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS exon 7250 7395 . + . ID=g1356.t1.exon3;Parent=g1356.t1 NODE_2071_length_7853_cov_39.8095 AUGUSTUS CDS 7250 7395 . + 2 ID=cds.g1356.t1;Parent=g1356.t1 #PROT g1356.t1 g1356 MAEDLYQAPQDLLRVLKAQTEEIYDDPQEICAQKAVRTDSHIYASLSYIKGDRKRSIYDDPIDPTLRRGSRTPSYATLPGIKEKRSDSKPREIEETTQQVVKRISVAHSRSDHDSR* # PASA_UPDATE: g1355.t1, single gene model update, valid-1, status:[pasa:asmbl_3420,status:3], valid-1 NODE_2071_length_7853_cov_39.8095 . gene 1581 6064 . - . ID=g1355;Name=g1355.t1 NODE_2071_length_7853_cov_39.8095 . mRNA 1581 6064 . - . ID=g1355.t1;Parent=g1355;Name=g1355.t1 NODE_2071_length_7853_cov_39.8095 . five_prime_UTR 5858 6064 . - . ID=g1355.t1.utr5p1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 5772 6064 . - . ID=g1355.t1.exon1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 5772 5857 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 5425 5541 . - . ID=g1355.t1.exon2;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 5425 5541 . - 1 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 5247 5305 . - . ID=g1355.t1.exon3;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 5247 5305 . - 1 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 4637 4776 . - . ID=g1355.t1.exon4;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 4637 4776 . - 2 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 4206 4344 . - . ID=g1355.t1.exon5;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 4206 4344 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 3773 3885 . - . ID=g1355.t1.exon6;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 3773 3885 . - 2 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 3475 3618 . - . ID=g1355.t1.exon7;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 3475 3618 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 3151 3282 . - . ID=g1355.t1.exon8;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 3151 3282 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 2776 2863 . - . ID=g1355.t1.exon9;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 2776 2863 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 2402 2493 . - . ID=g1355.t1.exon10;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 2402 2493 . - 2 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 2130 2247 . - . ID=g1355.t1.exon11;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 2130 2247 . - 0 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . exon 1581 1944 . - . ID=g1355.t1.exon12;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . CDS 1862 1944 . - 2 ID=cds.g1355.t1;Parent=g1355.t1 NODE_2071_length_7853_cov_39.8095 . three_prime_UTR 1581 1861 . - . ID=g1355.t1.utr3p1;Parent=g1355.t1 #PROT g1355.t1 g1355 MSEPTDQADRNVEMWKIKKLIKSLEAARGDGTSMISLIVPPRDQISRVAKMLAEEYGTASNIKNRVNRQSVLAAIVSVQNRLKLYNNVPTNGLVIYCGTIITEDGKDKMVNIDFEPFKPINTSLYLCDNKFHTEALNDLLEDDSKFGFIVMDGNGALFGTLSGNTREVLHKFNVELPKKHGRGGQSALRFARLRMERRHNYVRKVAETATQIFITNDKPNVAGLILAGSADFKTELSQSDMFDQRLVPKIIKIVDVSYGGESGFNQAIELSQECLQNVKFIQEKKLILKFFEEISQDTGRYCFGVDDTLKGLEMGAVEVLIVWENLEVNRYTMKNASSGETATIHLTREQEKDRSHFVDETGADLELVEKISFLEWLANNYKKFGAVLEIVTDKSQEGSQFCKGFGGIGGLLRYRVDFQTMDVNEDDYIDDLDDFM* # PASA_UPDATE: g1354.t1, single gene model update, valid-1, status:[pasa:asmbl_3417,status:12], valid-1 NODE_2071_length_7853_cov_39.8095 . gene 119 1401 . + . ID=g1354;Name=g1354.t1 NODE_2071_length_7853_cov_39.8095 . mRNA 119 1401 . + . ID=g1354.t1;Parent=g1354;Name=g1354.t1 NODE_2071_length_7853_cov_39.8095 . five_prime_UTR 119 206 . + . ID=g1354.t1.utr5p1;Parent=g1354.t1 NODE_2071_length_7853_cov_39.8095 . exon 119 600 . + . ID=g1354.t1.exon1;Parent=g1354.t1 NODE_2071_length_7853_cov_39.8095 . CDS 207 600 . + 0 ID=cds.g1354.t1;Parent=g1354.t1 NODE_2071_length_7853_cov_39.8095 . exon 736 1401 . + . ID=g1354.t1.exon2;Parent=g1354.t1 NODE_2071_length_7853_cov_39.8095 . CDS 736 1103 . + 2 ID=cds.g1354.t1;Parent=g1354.t1 NODE_2071_length_7853_cov_39.8095 . three_prime_UTR 1104 1401 . + . ID=g1354.t1.utr3p1;Parent=g1354.t1 #PROT g1354.t1 g1354 MFGHHHHHRDIVVVETGGPMMPVMAPMMPMPMMQPMMQPMMQPMMQPMMQPGYPMQQGYPMQPQQGYPMQQQPQQGYPMQQQQGYPRPQQGYPQQPGYPMQQQQQQGYPMQQQQQPYPPQQAYVASAPPMMGPTVGAAYPNAMGGTTFVQRDGFGDSVEVKTGAFGQRDVIERDAWGNKKEVKTNMFGSDVIERDAFGNQVEVKRNIFGGTEVIERDAFGNMTEVKTNMFGERTIVKEDAWGDEVVIRERNRW* # PASA_UPDATE: g229.t1, single gene model update, valid-1, status:[pasa:asmbl_1550,status:3], valid-1 NODE_1423_length_11437_cov_41.0804 . gene 1013 7091 . - . ID=g229;Name=g229.t1 NODE_1423_length_11437_cov_41.0804 . mRNA 1013 7091 . - . ID=g229.t1;Parent=g229;Name=g229.t1 NODE_1423_length_11437_cov_41.0804 . five_prime_UTR 6576 7091 . - . ID=g229.t1.utr5p1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . five_prime_UTR 6186 6344 . - . ID=g229.t1.utr5p2;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 6576 7091 . - . ID=g229.t1.exon1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 5343 6344 . - . ID=g229.t1.exon2;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 5343 6185 . - 0 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 4566 4851 . - . ID=g229.t1.exon3;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 4566 4851 . - 0 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 3783 3942 . - . ID=g229.t1.exon4;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 3783 3942 . - 2 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 2122 3238 . - . ID=g229.t1.exon5;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 2122 3238 . - 1 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 1662 1789 . - . ID=g229.t1.exon6;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 1662 1789 . - 0 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . exon 1013 1395 . - . ID=g229.t1.exon7;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . CDS 1275 1395 . - 1 ID=cds.g229.t1;Parent=g229.t1 NODE_1423_length_11437_cov_41.0804 . three_prime_UTR 1013 1274 . - . ID=g229.t1.utr3p1;Parent=g229.t1 #PROT g229.t1 g229 MGICVKRRARFLVYLALASALFVAYVSTQHRHDGSHGTRKNTAADARLRDTSKAADDYVVNDDDVIVRRRKPEVNGKIDDAPGAREDDEPEGGAVIVRRRKPEVNGKIDDAPGARDDDELEGGDGVESDTTSNEDSGDAFDGRRVSGAGEGGNGLHGATTDNDEFGIPQAKGANGVGAARDSARKGDSNKLNGFNADLESNPDAIVNGNAIGNAYNGNDNINRGRANANDRVEFDSPIGLGADRKLAPFAQPQQLSGGADKVDAAIANLPPGTLVKELGNQVENPSFEEVLASNQRINTHGWWTDGKTWERVECAPGMPCPGQSLGVGCSPQFIRGAYQFLPIQNEAAAGVEISALISGRGMTAILPPQKSLFGLMVIVTYASGVTETHRISVDQETFDSTGGNVSQTVAQRIAFRNGEVVSSVLIMLTCFGYKGNAWFDDISALPTIHTASRGMIGRGYINDPPDNFPVLGAKKKLFQKELSKANLKKVQAELDTARGVTTKSDGRVDADKMVTLVTHGTFDRLESMLLSFKEWDGPIAVALYGTRGMRTAGADGASAYKSEWAIAEETTRQMAKDPRLNAVAHKLSLMLVVGDEGEEYPINRLRNEARKLVKTGFVLMVDADFVPSPASCRSFFDALGVIGEQRQSEGSPQQGGQGERADGTSGGDWTRTTAFVVPAFEPVLLPRGKLGPNARAVPTEITWPGGKMVAPALMPEDYPRSKEDLAEHVRGGRMQQFQFKQKIDAHGATNYERWLLSGAEPYDVDFGRPDYNVYNYEPYVIVRVSPSLPQFDERFSGFGMNKVSFLIELSAAGYMFTVLPNNWLVHVPHPETNLLADFQMDVEKRALNRVRRYEFLSNLLNKYRPRKRMDLDTIDLPDDIKALL* # ORIGINAL: g230.t1 original gene structure, not modified by PASA NODE_1423_length_11437_cov_41.0804 AUGUSTUS gene 7768 11259 . + . ID=g230;Name=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS mRNA 7768 11259 . + . ID=g230.t1;Parent=g230;Name=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS exon 7768 8609 . + . ID=g230.t1.exon1;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS CDS 7768 8609 . + 0 ID=cds.g230.t1;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS exon 8933 9056 . + . ID=g230.t1.exon2;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS CDS 8933 9056 . + 1 ID=cds.g230.t1;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS exon 9206 10374 . + . ID=g230.t1.exon3;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS CDS 9206 10374 . + 0 ID=cds.g230.t1;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS exon 10755 11259 . + . ID=g230.t1.exon4;Parent=g230.t1 NODE_1423_length_11437_cov_41.0804 AUGUSTUS CDS 10755 11259 . + 1 ID=cds.g230.t1;Parent=g230.t1 #PROT g230.t1 g230 MDGEEDEPTVRRHTVADTSSQRATLSTQQSITTSSAVSEGASPSAPLSARHSAATQSPALPQGVPTVATDKLNSGAGYEGVPRGVYDWEYAGHGQFEVVHSSASSASTAGRPSATQLSGGSPARGSAQTTQTGTTGPATATTGRHTTIMNPDFFLSRNASTDPSSTIHALTADSSVAESVGTGGGSSDAGGKRSPSHATIAVGDDAVEVTEVHEEKKLGQLKATAMSANDITSSVLYTAGLVAASAGYYAPVCLVLVIMLLHLFRRIYVELVTALPLNGGTYTAILNTTNKTVASSAACLSFLSYTATVVVSGASAMSYLQQLWTSMPLIPATLILLGLFAILVILGMRDSANVALAIFLFHMLTLSILLTSAFYCTCKNKWQDFRDNYTLAPSPSNPFTAIIYGFSTAMLGITGFETSANFVEQQKPGVFPKTLRNMWFLVAVINPLTSLLSFGVIPYTQMYVSVVDPLTNTTYYTNKVTEDVANSLLATMADDMSGCVGGTWLKTLVIVDAVLVLSGAVLTGYIGVLGLMRRMSEDKCLPQFLLATNKIFRTNHLIIIVFYAVCVTLYLIAWGDLTQISGVYTISFLSVMALFGCGNLLLKHKRNSLRRDVKAHALVVCVAISGVLVAWIGNVIQTPVILIYFVLYFSVFFCFALGMFYRAAFIKYVLYSLETRVATNERARRLKEYLVPMLMRIESDPVVFFTKHCDLRTLNKAVQYVKGNEQTRVLKIVSAFGDEIPHGKSPIPPDFEDSMRVLERCYPRIRLDVLFIRGVFTPEFVREISKRVGVPTNRMFIGCPGEKFPYDVAQLGGVRIVVRRNDRGHTQMLENLKVRLDEAQKLQRIGHSGTEVTGAAGGSGLGVEPSLRSRASVKRRNST* # ORIGINAL: g12124.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 19550 20335 . - . ID=g12124;Name=g12124.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 19550 20335 . - . ID=g12124.t1;Parent=g12124;Name=g12124.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 19550 20335 . - . ID=g12124.t1.exon1;Parent=g12124.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 19550 20335 . - 0 ID=cds.g12124.t1;Parent=g12124.t1 #PROT g12124.t1 g12124 MDKLSGIVTLNVGGKPFTTSVETLRRVSDSMLAGMFSGQMGLCVDADGHYVIDRDPTHFRHVLNYLRRGVIDVSTFPVDRASLREIEIEADFYGLVELANAARDAVAREDSAKTQDVSDVDVVNRSSTQFVSASQALSRTASFFSTKRNYTTVRTFVYGVCEKAASIGWTEVMIVLRPNGAIMLGDVNDKMLGGFRSFEESAVHQQTLEYATHEQAVMWSHNGREAVLARRYLLHELRDAGYSAFIEVHGPSARLSISWAR* # ORIGINAL: g12125.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 21000 22601 . + . ID=g12125;Name=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 21000 22601 . + . ID=g12125.t1;Parent=g12125;Name=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 21000 21134 . + . ID=g12125.t1.exon1;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 21000 21134 . + 0 ID=cds.g12125.t1;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 21255 21342 . + . ID=g12125.t1.exon2;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 21255 21342 . + 0 ID=cds.g12125.t1;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 21496 21693 . + . ID=g12125.t1.exon3;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 21496 21693 . + 2 ID=cds.g12125.t1;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 21929 22092 . + . ID=g12125.t1.exon4;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 21929 22092 . + 2 ID=cds.g12125.t1;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 22398 22601 . + . ID=g12125.t1.exon5;Parent=g12125.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 22398 22601 . + 0 ID=cds.g12125.t1;Parent=g12125.t1 #PROT g12125.t1 g12125 MVGVLIGIFLIIEKTDPYHRVILRSEMEDYKYPLVNNTISPVVLMVLTFAVPAVSIIIMFCFSRSKKDLHMGLLGLCVAVLFTGITTDFVKVLVGRPRPDFFWRCFPDGIESWSDNQPMCTGSVADVREGRKSFPSGHSSLSFAGLGFLAFYIAGKAHVFDRRGHVYKMVLFMAPFFLALYVGLTRIRDYWHHWQDVTVGGLLGITIAFATYRQYFPALDHHECHKPHPYRDHFDSPVVHVTADTSEESLAKPNSSLRFEDV* # ORIGINAL: g12121.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 242 1232 . - . ID=g12121;Name=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 242 1232 . - . ID=g12121.t1;Parent=g12121;Name=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 1185 1232 . - . ID=g12121.t1.exon1;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 1185 1232 . - 0 ID=cds.g12121.t1;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 909 931 . - . ID=g12121.t1.exon2;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 909 931 . - 0 ID=cds.g12121.t1;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 632 821 . - . ID=g12121.t1.exon3;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 632 821 . - 1 ID=cds.g12121.t1;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 363 549 . - . ID=g12121.t1.exon4;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 363 549 . - 0 ID=cds.g12121.t1;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 242 283 . - . ID=g12121.t1.exon5;Parent=g12121.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 242 283 . - 2 ID=cds.g12121.t1;Parent=g12121.t1 #PROT g12121.t1 g12121 MATKLAVRPKTTETAAVSSITYLRALFPEDAYTNRSLEGLKLKVLRRGHSDSADLLMNWVDGCFDALEKRYLREIVVDICVDATSPDRPVENYTFKFAYPENSIANGTFSLHSGKDVLTPSTTVADIRKATIKMLRTLIVLTQTLKTLPDERYITMRLNYYDE # ORIGINAL: g12131.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 32493 32834 . + . ID=g12131;Name=g12131.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 32493 32834 . + . ID=g12131.t1;Parent=g12131;Name=g12131.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 32493 32834 . + . ID=g12131.t1.exon1;Parent=g12131.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 32493 32834 . + 0 ID=cds.g12131.t1;Parent=g12131.t1 #PROT g12131.t1 g12131 MYPVNDPFDDLSVYAAAQEYQKPHAQTRNPVCSSAVPAGFTSPHTAQSQRPESPATVGAAARANNATSGFAAAVGSSAVPSKAVSDTQQKRVPFRLVRKLYGRHWRAPLWCGV* # PASA_UPDATE: g12128.t1, single gene model update, valid-1, status:[pasa:asmbl_10214,status:3], valid-1 NODE_97_length_40650_cov_42.5821 . gene 27856 29232 . + . ID=g12128;Name=g12128.t1 NODE_97_length_40650_cov_42.5821 . mRNA 27856 29232 . + . ID=g12128.t1;Parent=g12128;Name=g12128.t1 NODE_97_length_40650_cov_42.5821 . five_prime_UTR 27856 27979 . + . ID=g12128.t1.utr5p1;Parent=g12128.t1 NODE_97_length_40650_cov_42.5821 . exon 27856 29232 . + . ID=g12128.t1.exon1;Parent=g12128.t1 NODE_97_length_40650_cov_42.5821 . CDS 27980 28996 . + 0 ID=cds.g12128.t1;Parent=g12128.t1 NODE_97_length_40650_cov_42.5821 . three_prime_UTR 28997 29232 . + . ID=g12128.t1.utr3p1;Parent=g12128.t1 #PROT g12128.t1 g12128 MDKGRPSSATKTVASRAAPSAAAASRGRASPSPSGAVVANARPASAARAPSSTSASAAKPTSTAKGASAAGTRAASNGSAGASGGSAGGGASKSVVARRFPPKPQFPRAFPAWVDSASPAVGINVQFGPGLNNGNPTYHSRIYTFSGPVATKEDVIFEHVEDGSKHGKAHKLFHEYQEKRIGDGKDIKFEIEGRDFNPAHYAEVDPRQIGNPTPAQLKKFTAAADKIATHRKERMEKYLLVEERWAQIHKFENIITYKDVPWPDFKKKNGLLPFLLDPDRAPFKTKAHHEDYLRVLRDRWDVAAFDRTLGHRIADEDRERIITRVDEIMQIVGPKDVL* # ORIGINAL: g12133.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 39421 40606 . - . ID=g12133;Name=g12133.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 39421 40606 . - . ID=g12133.t1;Parent=g12133;Name=g12133.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 40391 40606 . - . ID=g12133.t1.exon1;Parent=g12133.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 40391 40606 . - 0 ID=cds.g12133.t1;Parent=g12133.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 39421 40203 . - . ID=g12133.t1.exon2;Parent=g12133.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 39421 40203 . - 0 ID=cds.g12133.t1;Parent=g12133.t1 #PROT g12133.t1 g12133 MVFTNTISAASTAVANPSAVESRMARLAKEAETEKKQRIHLEEQLEIERRDRRRLQQSLQREMMRVPEQNVQGAVPVPVPAQFLSSPAQWFAASDIVKRTEKLEAECMTLREEARRAQAEVSSVRRREVSLQEEVRVLRAKLLSAETRLGETGKSVERAQDKVRELELSLGRTAASAIRRKQEEVKLRNAEKWLATIPVLQRRMATLRAREAEAHHHDQQQNTQQSVSQYASFASEGNADGTFVQDNSGVRVDDAFRSHPSPLRKMERGKGQAAHKSPQNSQSAQLPGHVDIRVRHASESPSNNSVRAAEMSLHADVRTSVRVDWHRELANG* # ORIGINAL: g12122.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 1833 9633 . + . ID=g12122;Name=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 1833 9633 . + . ID=g12122.t1;Parent=g12122;Name=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 1833 1971 . + . ID=g12122.t1.exon1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 1833 1971 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 2235 2543 . + . ID=g12122.t1.exon2;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 2235 2543 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 2647 2815 . + . ID=g12122.t1.exon3;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 2647 2815 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 2937 3006 . + . ID=g12122.t1.exon4;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 2937 3006 . + 1 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 3089 3168 . + . ID=g12122.t1.exon5;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 3089 3168 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 3280 3391 . + . ID=g12122.t1.exon6;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 3280 3391 . + 1 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 3519 3632 . + . ID=g12122.t1.exon7;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 3519 3632 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 3721 3799 . + . ID=g12122.t1.exon8;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 3721 3799 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 3918 4061 . + . ID=g12122.t1.exon9;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 3918 4061 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 4165 4229 . + . ID=g12122.t1.exon10;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 4165 4229 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 4378 4524 . + . ID=g12122.t1.exon11;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 4378 4524 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 4648 4790 . + . ID=g12122.t1.exon12;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 4648 4790 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 4917 5062 . + . ID=g12122.t1.exon13;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 4917 5062 . + 1 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 5225 5349 . + . ID=g12122.t1.exon14;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 5225 5349 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 5450 5627 . + . ID=g12122.t1.exon15;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 5450 5627 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 5776 5957 . + . ID=g12122.t1.exon16;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 5776 5957 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 6197 6323 . + . ID=g12122.t1.exon17;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 6197 6323 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 6469 6644 . + . ID=g12122.t1.exon18;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 6469 6644 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 6753 6875 . + . ID=g12122.t1.exon19;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 6753 6875 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 7001 7180 . + . ID=g12122.t1.exon20;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 7001 7180 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 7329 7571 . + . ID=g12122.t1.exon21;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 7329 7571 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 7705 7906 . + . ID=g12122.t1.exon22;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 7705 7906 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 8013 8071 . + . ID=g12122.t1.exon23;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 8013 8071 . + 2 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 8253 8393 . + . ID=g12122.t1.exon24;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 8253 8393 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 8508 8702 . + . ID=g12122.t1.exon25;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 8508 8702 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 8862 8957 . + . ID=g12122.t1.exon26;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 8862 8957 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 9090 9248 . + . ID=g12122.t1.exon27;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 9090 9248 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 9469 9633 . + . ID=g12122.t1.exon28;Parent=g12122.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 9469 9633 . + 0 ID=cds.g12122.t1;Parent=g12122.t1 #PROT g12122.t1 g12122 MSEQRVLDDKIDRVAEALCAGKGDSDARERTRELEALLDASDEEWVPSPAESIKGGQRRTALFTFAISALDSSQQAEKTSNNVLGLLVAQVDSLPADALVTFVSQIIASLRKSTGPDHTSGQRSYKALELLPKMLSMIASHESISIKAADGTSDVMMSGVQYRSHMLNKLCSLRWEPDAVIHLVTMFRDVELATDELRFVVEKIFRQMTGMELDEIPPLIYQLLLLSAKGQRRLVLRGLITHFGELEAKVRSSASRDVVNGMDIEQHADTAEHLWQVEGTVLLHVLFAMKQDQELGAEFLRNLKSTPLSSFSPFAVALVLSLGRIHRFENSTFDLLKGMILRCHRDSQQRAHAGWIEDKNALESFDIGGSIMEVVRRSVHDWDHVTEGIAELGLALLDAHSTKNHEEDTPQHKCAVLGQRLLVEIFKLHEHVRLHVLEQVLARIVAKTLSHVGYYVDTLSKMVATSSQAFFELMQKIKEAFDYLSLLSLPTAEGLMQAVYPLISINASLRDYIILVLRKSVFARDVDAREIAIMGFLNILKASKLRSEVELTQAGASQAVHRENEGLCLEVIGTMRRSLAQQAGVRLRIYEGLAEVVRQNPLIRDDVLTILMPQLLKYVETNDGVLPPVKLGLCMEHSGDHVRLCEPVAHLLSTVVNCVAAHGGNGAYASAVEDVRASLNNRRKLAEILDSISRRLIKSEMDDFELDKAADYAMSSAVGCQNSIRASLLLGSYEAMMEYILSAGSLSADRADEVLKLYSNYQKLADVLKEKAALGKGKGSGTVCLMTLGCVTDLLRRVFTPTAEGDADETGCAVLQGKPEFEVYVLKAAVAKLQQIEEKGHCEDTKDADVVYRHTTQLARILLKVYKASTEASRALKKTVLALEGVKSALAHVCLRRKSRVVEFLRRVDNGAEDDEGIASNADSSERIHCHIRVFQRFVVDLLGRNGDVPSRESQLLLSLIAQLATLIWDEPRRALQLQQWSVKLCQEHAIDDPVIAKAMLDLMLNASARVKDGLGVMLSLSADIRNEVGEIENDDTRPVQDRRSFAVVCGRTVPASLSLVVAYLIECAEEVEWALEKLQSDSQTESSQLDASQAVPSERIAVEELLFRRLATITESFNEIVRTSLMNAHAELVLKSLRRLYLIYATVSKYSLATQPAGGKGKVSRALEELVDASAGQLSSGIYALITFVQTCDIQNSKMASGAPKKKQKPNTAAKARILRESRIVPNMIYAIEQNERFLIKLSKKTKTNLMKKIKRSTARDFRIQANELDTALSRADNGDGGSDDSANPSDAENEDPKGKARAKRGLKGGGGKGAPAAKRRRRQASVGGADSGDGGDGDAAVAGGDAVPMDQVT* # ORIGINAL: g12130.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 32182 32415 . + . ID=g12130;Name=g12130.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 32182 32415 . + . ID=g12130.t1;Parent=g12130;Name=g12130.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 32182 32415 . + . ID=g12130.t1.exon1;Parent=g12130.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 32182 32415 . + 0 ID=cds.g12130.t1;Parent=g12130.t1 #PROT g12130.t1 g12130 MTSFAISIGIPVAIGGIKQARIKSGNGSRAQEPGKRLEKTAELLNKALQAKYGNSNLPAITSPDVEAMSAAIRETAD* # PASA_UPDATE: g12123.t1, single gene model update, valid-1, status:[pasa:asmbl_10209,status:12], valid-1 NODE_97_length_40650_cov_42.5821 . gene 10344 18452 . - . ID=g12123;Name=g12123.t1 NODE_97_length_40650_cov_42.5821 . mRNA 10344 18452 . - . ID=g12123.t1;Parent=g12123;Name=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 18341 18452 . - . ID=g12123.t1.exon1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 18341 18452 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 18071 18217 . - . ID=g12123.t1.exon2;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 18071 18217 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 17737 17903 . - . ID=g12123.t1.exon3;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 17737 17903 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 17349 17559 . - . ID=g12123.t1.exon4;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 17349 17559 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 16808 17130 . - . ID=g12123.t1.exon5;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 16808 17130 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 16451 16664 . - . ID=g12123.t1.exon6;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 16451 16664 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 16047 16205 . - . ID=g12123.t1.exon7;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 16047 16205 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 15643 15792 . - . ID=g12123.t1.exon8;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 15643 15792 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 15146 15296 . - . ID=g12123.t1.exon9;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 15146 15296 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 14705 14883 . - . ID=g12123.t1.exon10;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 14705 14883 . - 1 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 14126 14548 . - . ID=g12123.t1.exon11;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 14126 14548 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 13726 13919 . - . ID=g12123.t1.exon12;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 13726 13919 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 13459 13483 . - . ID=g12123.t1.exon13;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 13459 13483 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 12695 13248 . - . ID=g12123.t1.exon14;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 12695 13248 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 12381 12431 . - . ID=g12123.t1.exon15;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 12381 12431 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 11925 12106 . - . ID=g12123.t1.exon16;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 11925 12106 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 11745 11780 . - . ID=g12123.t1.exon17;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 11745 11780 . - 1 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 11534 11603 . - . ID=g12123.t1.exon18;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 11534 11603 . - 1 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 11272 11353 . - . ID=g12123.t1.exon19;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 11272 11353 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 11044 11123 . - . ID=g12123.t1.exon20;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 11044 11123 . - 2 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . exon 10344 10745 . - . ID=g12123.t1.exon21;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . CDS 10566 10745 . - 0 ID=cds.g12123.t1;Parent=g12123.t1 NODE_97_length_40650_cov_42.5821 . three_prime_UTR 10344 10565 . - . ID=g12123.t1.utr3p1;Parent=g12123.t1 #PROT g12123.t1 g12123 MAPTRLSALPCSAMLSFIFVFVAVTLPTADAKIAILANSNSEFNTLGRTGCIKAATEIFNATAANSLCEYIIIASPTVDNVRPYAIDPTYNLIIALGFLFETPVKTLAVAYQNATFSVIDVAINPGEDPLLKNNMQGIIFAEDEGGYMAGLVAGLVTTTRRVGVITAFPFASLLRFSNGFLRGVDHSCPKCSVFRAFVPSFVDADLGVNASNVMLDAGVDVIYGAGGSMGSAAILNAAQKGAFVIGVDTDESKSTFLSRPASEASKIVTSSEKRTDTGAYVSVRDKLTNRFTGGNKLVDMAVGGIALSPCSSALGCSLLQVETSVLQLGGAVSLVGGGSDANLAAQGGSDCGVVKQFSRQQYVDIVAERIKSKGISTGVGDGGYLNNPNIVANKTWTALHPFGPMPTGRSGHASAFSAVDNFYFAFGGDTGSGGYSNKLLLLDYDWLEWRDIASTNAPVGLAQHSLQYHNGKLFLFGGTDSTFTFKNDLYVIDFVADNMTATFTKLAVAAPWPDARIYHATTSIGSTMYMYGGFTASLSADNSLWSFNYNTRVWTSLPMLGTRPPALRAAAITPSGLAGNNTLVLFGGQLSDGSLSNAVYVYNIGTGVWSSVVPAGQQPSAIRNHGATILSNGKILYAGGVNSLGPTGDVRLLDTVQMAWLVPQLPSLPQRVHSFGGLHVFRQTDKTNPCQYPVLTFITLCVPQSRDIMLYFGGFDSADGPSNDVRLVYPGTFANPVIVPIQVTQTSSSGTPAYVIPVAVVVPLSVALLAILGFWRAAVNRRKMTEQLQKKAYNWIVAWADLDIREKIGEGSFGLVYRGVYRGAEVAVKTLKNELSGADIGNPHASLRSRLVVKLLRRKSADSALFTSSKSSVLHNLVVKATNDATSSSRATDSLVLTQQSDKGSAPKTDSKAVVKVASFENLDLADMEALDDMGPMGPSAKKTENNIEKFMSNVYQSRTARNAAQGKDRSAGKTVILDSIMSNDSQKSSNAEAMYSLNDFEKEIETMVSLRHPNIVMFMGACLELKNLAILTEFMHGGSVYDFYSDETMPIEWDLKASMALDAANGMVYLHSARPPILHRDMKSPNLLIDSSMRVKVSDFGLAEFKSTSSSSNNKIGGSLVWMSPTVLNGEAFQEGDDVYSFGIVLTELINRTLPYSELDLDIGALIALIAFHDLRPTMPRDVPEGIAKLVHDCVEGKPENRPSFAAIAERLKQFAANFANTKTKQSE* # ORIGINAL: g12129.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 29387 31655 . - . ID=g12129;Name=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 29387 31655 . - . ID=g12129.t1;Parent=g12129;Name=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 31518 31655 . - . ID=g12129.t1.exon1;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 31518 31655 . - 0 ID=cds.g12129.t1;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 30564 31412 . - . ID=g12129.t1.exon2;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 30564 31412 . - 0 ID=cds.g12129.t1;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 30049 30215 . - . ID=g12129.t1.exon3;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 30049 30215 . - 0 ID=cds.g12129.t1;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 29696 29924 . - . ID=g12129.t1.exon4;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 29696 29924 . - 1 ID=cds.g12129.t1;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 29387 29524 . - . ID=g12129.t1.exon5;Parent=g12129.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 29387 29524 . - 0 ID=cds.g12129.t1;Parent=g12129.t1 #PROT g12129.t1 g12129 MSSKSKRGAKKGPASAVATAPLSQQKLQDSKVDQCLHAILAHLSNESAPVSGSPKEWEEFVRLHSLVDALREAELSVISKDVASSDDVDWNAKFDKFRAWLASNGLPAHALEFARFGHEGNGVMAARDVKQGENIVNVPLSLMLTTETAAKSELANLIQVDKLLQGIPSVTLAVHLLLETKKKEASKWAPYIDILPRSFGIPLFFSIAELEQLKGSPVRLEAMRFYWNVVRQYSHVRPLLTKGIGGKTPLLDARSVSFDDYAWAVASVVTRQNRIPVGGTNDNPTFGLALIPVWDMCNHTAAGEITTVFNAGTSSLECTAIKDFNKGEQVFIFYGPRPNSELLMCSGFVAPTNPHDGLSVRVGLPKDDPLAERRQRLLQRMNMTALCDFILRPSGICPQSLACFLRAFTATEPELSATESLRVGTLGDMSAAISPDNEQKCIDLLIGRCTLLLRAYPTSAEDDERLLSNGGISTNIRAAIDLRLCEKRILRATLEWLNKLKAGLAH* # PASA_UPDATE: g12132.t1, single gene model update, valid-1, status:[pasa:asmbl_10212,status:3], valid-1 NODE_97_length_40650_cov_42.5821 . gene 33503 39236 . + . ID=g12132;Name=g12132.t1 NODE_97_length_40650_cov_42.5821 . mRNA 33503 39236 . + . ID=g12132.t1;Parent=g12132;Name=g12132.t1 NODE_97_length_40650_cov_42.5821 . five_prime_UTR 33503 33666 . + . ID=g12132.t1.utr5p1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 33503 33847 . + . ID=g12132.t1.exon1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 33667 33847 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 33975 34111 . + . ID=g12132.t1.exon2;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 33975 34111 . + 2 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 34242 34427 . + . ID=g12132.t1.exon3;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 34242 34427 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 34620 34842 . + . ID=g12132.t1.exon4;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 34620 34842 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 35151 35238 . + . ID=g12132.t1.exon5;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 35151 35238 . + 2 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 35359 35471 . + . ID=g12132.t1.exon6;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 35359 35471 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 35603 35801 . + . ID=g12132.t1.exon7;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 35603 35801 . + 2 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 36012 36149 . + . ID=g12132.t1.exon8;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 36012 36149 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 36253 36373 . + . ID=g12132.t1.exon9;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 36253 36373 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 36672 36736 . + . ID=g12132.t1.exon10;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 36672 36736 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 36829 36891 . + . ID=g12132.t1.exon11;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 36829 36891 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 37044 37181 . + . ID=g12132.t1.exon12;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 37044 37181 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 37321 37415 . + . ID=g12132.t1.exon13;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 37321 37415 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 37710 37838 . + . ID=g12132.t1.exon14;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 37710 37838 . + 2 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 38045 38063 . + . ID=g12132.t1.exon15;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 38045 38063 . + 2 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 38188 38266 . + . ID=g12132.t1.exon16;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 38188 38266 . + 1 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 38380 38562 . + . ID=g12132.t1.exon17;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 38380 38562 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . exon 38691 39236 . + . ID=g12132.t1.exon18;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . CDS 38691 38792 . + 0 ID=cds.g12132.t1;Parent=g12132.t1 NODE_97_length_40650_cov_42.5821 . three_prime_UTR 38793 39236 . + . ID=g12132.t1.utr3p1;Parent=g12132.t1 #PROT g12132.t1 g12132 MSPVDGYAGGDDADESGLRQRKAAAGASPPAAASTTSSPPPKVKPSGSDAALIGRTPDNIEFKVPQTTDLLNNILRFEKYNVFDLVNFGLLIFQVGLFLFGVLPRWVYVPLFFFWRLCYDGGLGLLLHHQSSSRALTRVVMAIDQFPTAKGFLKRQLERKMGPDYNYDAMPPSFNAWLLFRHIVDIVLANDLGCYFLLCLSYTEFPGFSMWNIFLYVVGISLCCVNLWVKMDAHRVVKDFAWYWGDFFFVIDQELTFDGVFQMAPHPMYSVGYMFFYGMSLITRSYIVLYASLTAHFCQFLFLGLVENPHIEKTYPSVVPKLDPGKQQILRKYFRSDLIVFNNLDPFRAADLFLIVMVSQVAFSYFLPVGPWFYVLQAAFWRLSYSLGVGLLLFFQSHRKSWTQHFISRGFTKEYAFEQWKSIYNATLTMAYVSFAVCAMKMYEVPDDWTMKGELARHTLGVLLIALHVWCSVSTFEVLGEYGWFYGDFFIEEYEPTIYYHGIYRFLNNPEKVMGFAGFYGAALISSSYVVFALALLSQISWALFLQYVESPHVTRLYGDKRRIESGFTAAIKIKTDGIMTKAEPITKEIEKLVVPIRGEVTKLASPIVEGVTKFRESAETLVKKVPMFSKDQPALGNLVSMQYPLVQELSMDQVTELVREIWQNLLGVDVSTTDDFFALGGNSLQAVQFIELVRSQFGVDLKPVAMRNTPELGELAQTIFEGRQILAGQRRSSADIAVASASGAATLQADS* # ORIGINAL: g12126.t1 original gene structure, not modified by PASA NODE_97_length_40650_cov_42.5821 AUGUSTUS gene 23246 24331 . - . ID=g12126;Name=g12126.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS mRNA 23246 24331 . - . ID=g12126.t1;Parent=g12126;Name=g12126.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS exon 23246 24331 . - . ID=g12126.t1.exon1;Parent=g12126.t1 NODE_97_length_40650_cov_42.5821 AUGUSTUS CDS 23246 24331 . - 0 ID=cds.g12126.t1;Parent=g12126.t1 #PROT g12126.t1 g12126 MAAAAGRGHWARAVLMPLLMALAVCTYSSHSILSALSQRGGRIHYNISAAVFVTEFVKLVASIVMASIAGFLARRPSGRPPSFKLTDSDGDGEVDVAANWISSVLKPSAFARLALPAVLYAVNNNIAYHAQREMDAASFVVLCNFKIVTTALLFRVIMRKHLTQAQWAAMPLLVLAGALNGYSGMSHNEATEGHVFVTTRGAVLMLVYCGISGLAGVYSEKVLKTTGATASIHAQNIPMYILGVAFNGFAWWSSVAYVTGDGGVCALLRGFNLHTWAIVATQAANGILLSIVMKHASSIAKLFVVALATALGTVLAITLLGLKTDFFFVVSLVCVLVALALYNRAAWANREKRVRSLEKIV* # PASA_UPDATE: g12127.t1, single gene model update, valid-1, status:[pasa:asmbl_10210,status:12], valid-1 NODE_97_length_40650_cov_42.5821 . gene 25725 27440 . - . ID=g12127;Name=g12127.t1 NODE_97_length_40650_cov_42.5821 . mRNA 25725 27440 . - . ID=g12127.t1;Parent=g12127;Name=g12127.t1 NODE_97_length_40650_cov_42.5821 . five_prime_UTR 27389 27440 . - . ID=g12127.t1.utr5p1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 27281 27440 . - . ID=g12127.t1.exon1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 27281 27388 . - 0 ID=cds.g12127.t1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 27052 27169 . - . ID=g12127.t1.exon2;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 27052 27169 . - 0 ID=cds.g12127.t1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 26609 26867 . - . ID=g12127.t1.exon3;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 26609 26867 . - 2 ID=cds.g12127.t1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 26400 26500 . - . ID=g12127.t1.exon4;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 26400 26500 . - 1 ID=cds.g12127.t1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 26083 26223 . - . ID=g12127.t1.exon5;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 26083 26223 . - 2 ID=cds.g12127.t1;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . exon 25725 25990 . - . ID=g12127.t1.exon6;Parent=g12127.t1 NODE_97_length_40650_cov_42.5821 . CDS 25725 25990 . - 2 ID=cds.g12127.t1;Parent=g12127.t1 #PROT g12127.t1 g12127 MEGAFVPPETLDHIFSFLTPRERALASGVCKYWMEVADDGLVWRRLCLVKWGVQQPPLVPSHSGRTGWKHLYFSENAYVAIGDIQLSAVAASSTDYPEQSIHNTLYNMRQDYSAFQMHPEMYWSSRGSEDENSSEWLSYRFPSVHIVKTMLISVYKADWQRGSPLYAPKTVRFTFSLWGCAPHYVTCVYPVEKSSDVQGFTIAAPVVATSVTVELIGRTQRQPGDELFYTVIDYVASYGVPFEDIRDNEIAAAVAARALLAMPPSVVGRTKRLDEGSDQILSLPTRQNFERDSDDDDEIEREPDGARMNLNEMQAFLEVATARALVSNSP* # ORIGINAL: g2934.t1 original gene structure, not modified by PASA NODE_5573_length_799_cov_27.9848_potentialcontaminant AUGUSTUS gene 46 732 . - . ID=g2934;Name=g2934.t1 NODE_5573_length_799_cov_27.9848_potentialcontaminant AUGUSTUS mRNA 46 732 . - . ID=g2934.t1;Parent=g2934;Name=g2934.t1 NODE_5573_length_799_cov_27.9848_potentialcontaminant AUGUSTUS exon 46 732 . - . ID=g2934.t1.exon1;Parent=g2934.t1 NODE_5573_length_799_cov_27.9848_potentialcontaminant AUGUSTUS CDS 46 732 . - 0 ID=cds.g2934.t1;Parent=g2934.t1 #PROT g2934.t1 g2934 MIGVNSKAIPVRTKRMPDVAFDVRSRPFRLNGVLDAAVRAGHVRLALMIDRRVPGLPVSLSSAVVSRRWVLFRHVLKRQPSPEDMDKALFAAVEANDLAFVRWFAEHTPDVFQRCLPRFGKYLRNARDMKFLGALLQKHPEISPSLRFGEYDTFALEHKLGIQIVQRPLGMMSALSSKAGRSTLQAVIDFRIPVMQPSSPWLSVMQRGNLTLYEWVKEKVDGGSFVFE* # ORIGINAL: g9293.t1 original gene structure, not modified by PASA NODE_663_length_19333_cov_54.0809 AUGUSTUS gene 141 1314 . - . ID=g9293;Name=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS mRNA 141 1314 . - . ID=g9293.t1;Parent=g9293;Name=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 1180 1314 . - . ID=g9293.t1.exon1;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 1180 1314 . - 0 ID=cds.g9293.t1;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 880 979 . - . ID=g9293.t1.exon2;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 880 979 . - 0 ID=cds.g9293.t1;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 535 725 . - . ID=g9293.t1.exon3;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 535 725 . - 2 ID=cds.g9293.t1;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 141 327 . - . ID=g9293.t1.exon4;Parent=g9293.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 141 327 . - 0 ID=cds.g9293.t1;Parent=g9293.t1 #PROT g9293.t1 g9293 MHSAFECSTGIPILPLQVESIAAWGNRLVIGTSKGILVVYDVKDKVEPVLREMRKSFAKKPVVQLAVFEQFHILISLSDNVISVHELVEFNLITTVNRSRGAILFAADVWEANNTKFVRLCVVLKRKIIVFEWRGGDFVEDKEYVLPETPRAVQWIGDNICVGFRGKYNLMHAKTGAVTDIFSPGRSEPLMCAFSEKELLVGKD # ORIGINAL: g9294.t1 original gene structure, not modified by PASA NODE_663_length_19333_cov_54.0809 AUGUSTUS gene 1835 4271 . + . ID=g9294;Name=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS mRNA 1835 4271 . + . ID=g9294.t1;Parent=g9294;Name=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 1835 2073 . + . ID=g9294.t1.exon1;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 1835 2073 . + 0 ID=cds.g9294.t1;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 2274 2436 . + . ID=g9294.t1.exon2;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 2274 2436 . + 1 ID=cds.g9294.t1;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 2564 2764 . + . ID=g9294.t1.exon3;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 2564 2764 . + 0 ID=cds.g9294.t1;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 2925 4271 . + . ID=g9294.t1.exon4;Parent=g9294.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 2925 4271 . + 0 ID=cds.g9294.t1;Parent=g9294.t1 #PROT g9294.t1 g9294 MEVLRDNFAATWQHVEQAVKDATFLAFDTELTGLTVNGSQRIATLDDMQDRYDKIRVSGESFLIIQFGLAAFKWIPETRTFEAKPFNFYVFPKPMDRNAPDRVFMSQCSSIDFLVSNGFDFNKLFRQGIPYISQAQSALRAQRQQARTESQAPGASDIPLGDNKQFIEDVCKSVYDWLQSSTEPTLDLPACNAFLRRLIFQECEKRFPRGITLSSKALKGAQRCVSVSRATEEQRKKLETDRAANQERDAGEAIGFRRVIDAIGASKKPIVGHNALLDLCNMYAQFIGHLPPLVADFKAAVLNSFGAQIIDTKYVASHPSLHGIIEGTALGELHDRICKPPFVLGAPQKPRKSMGVGDVGGPRPSEEGEIAIDEVMADDANQGADEVGAVRAGAAAEGDESDGGDQHSCALRPARVILAEGFDQYADGTSRLHEAGYDAYVTGACFVGLASHFQLSHFATRQKDEGGLACTCASGTPGAECAHAAAVCPTDLSQPWAVWWANRMFMMRSDAEYLRLDGPDAPPPREHAFYLSEFPDTWRQSDIVRLFRPYGDVSIQWVNSTAAVVFLVDKSRVGEIIPGVGAVIATEGLQVKLGTYDDFARIREASRKRPLEDDADAVGTAAANTGDGVAPGDSAADGTPNRAKRARTS* # ORIGINAL: g9295.t1 original gene structure, not modified by PASA NODE_663_length_19333_cov_54.0809 AUGUSTUS gene 4533 7766 . - . ID=g9295;Name=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS mRNA 4533 7766 . - . ID=g9295.t1;Parent=g9295;Name=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 7691 7766 . - . ID=g9295.t1.exon1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 7691 7766 . - 0 ID=cds.g9295.t1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 7357 7545 . - . ID=g9295.t1.exon2;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 7357 7545 . - 2 ID=cds.g9295.t1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 5949 7188 . - . ID=g9295.t1.exon3;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 5949 7188 . - 2 ID=cds.g9295.t1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 5654 5745 . - . ID=g9295.t1.exon4;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 5654 5745 . - 1 ID=cds.g9295.t1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 5260 5484 . - . ID=g9295.t1.exon5;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 5260 5484 . - 2 ID=cds.g9295.t1;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 4533 5080 . - . ID=g9295.t1.exon6;Parent=g9295.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 4533 5080 . - 2 ID=cds.g9295.t1;Parent=g9295.t1 #PROT g9295.t1 g9295 MAVRLAVTCNRLVSAPATLARIRSRYLSTQVDRVHMWDAQYPQYLELVDSLRRSSPPSVEVTVDGTHTVPATPFVTTPDDIARELAKNGSISRNVASKALVALVNGKSWDMRRPIESTSTLSFACTSASDDGKMHSTHVAEEVLCHSAAHVIGAALESHYGQELLLADGPAVPPNGLFYEARLPRSVAAMHVDDLEKLSEVAMKITQQKHAFVRMEVPLAVAREMFADNPFKQHYLGRIEAAGCPGAMTPNHVTLYRCGSFVDLCRGPHVRNTSVIGRVHATKASGAYWLGDAKNEQLQRVYAVAFESRAEFTKWQEMMAEAAKRDHRLIGKTQSLFFMHPLSPGSAFMQPHGQRIFNALVGLIRGIYREQGYQEVSTPLMFDKRLWETSGHWQHYAEDMFYVVSGRRVDDAPASESGGHATPHPPTPNNQHGAVDSLGTVSSSDDGLIGGRVHTCADDVHANATVGLKPMNCPAHCLMFEHAPQSHRDLPLRLADFSPLHRNEIAGALSGLTRVRRFHQDDAHIFCTEDQIGDEIGKCLEFIQRVYTIFGFDYSLVLSTRPDAFVGDIAVWDAAEKRLADCLSAVGRPWAVNEKDGAFYGPKVDVIVTDAIGRKHQVGTVQLDFQLPRRFNLGYTGPDGARHTPVIIHRAVLGSVERMMAILAEHTGGKWPLWLSPRQVLVAPVAIKDGLVAAAQEFGKLLHNDGFHVDVDLGNDTFGRKVRNAQQLRYNYIVVFGEREAEGGSVSVRPRDGKPVELSQEAFLGALRAERSSFGNSALSAPASEGAEK* # PASA_UPDATE: g9298.t1, single gene model update, valid-1, status:[pasa:asmbl_8746,status:3], valid-1 NODE_663_length_19333_cov_54.0809 . gene 14087 15876 . - . ID=g9298;Name=g9298.t1 NODE_663_length_19333_cov_54.0809 . mRNA 14087 15876 . - . ID=g9298.t1;Parent=g9298;Name=g9298.t1 NODE_663_length_19333_cov_54.0809 . five_prime_UTR 15696 15876 . - . ID=g9298.t1.utr5p1;Parent=g9298.t1 NODE_663_length_19333_cov_54.0809 . exon 15338 15876 . - . ID=g9298.t1.exon1;Parent=g9298.t1 NODE_663_length_19333_cov_54.0809 . CDS 15338 15695 . - 0 ID=cds.g9298.t1;Parent=g9298.t1 NODE_663_length_19333_cov_54.0809 . exon 14087 15220 . - . ID=g9298.t1.exon2;Parent=g9298.t1 NODE_663_length_19333_cov_54.0809 . CDS 14409 15220 . - 2 ID=cds.g9298.t1;Parent=g9298.t1 NODE_663_length_19333_cov_54.0809 . three_prime_UTR 14087 14408 . - . ID=g9298.t1.utr3p1;Parent=g9298.t1 #PROT g9298.t1 g9298 MVKQEDLATLSSMEHSLVSPTEKDSLCAGDSQDTEMHCAAPLSPAASGSAASPTAEVDAETDMVDGQLRTKRRLDSTCFESMPSPPESRGDVDEESDGHADKRRRVSSESSSTSEQLSSGNEGSSPLAKDAKEWHSEDGEKTTRRGRTRFTDTQLEALESSFGKNDHPNFTQLAQIAACVGVSERSAKVWFQNRRAKERKSARPAVASSYRSMAPSNLSHAVQRHVAAKPRIEPAPAVPHSQPQTHAQLVTHSPFAPPRAAFQPMPPGGMGRMMPLPVPYASGKAVGAQIGGSHPVATVPRQLMSAQQCVQPSAPAQQGPSSLKASNNNSTAIHSSSNNTAMPVLIASAAHSLPSSRSPSQMQSHAQSGELCGLNLLGMAALMVAGQTV* # PASA_UPDATE: g9297.t1, single gene model update, valid-1, status:[pasa:asmbl_8747,status:3], valid-1 NODE_663_length_19333_cov_54.0809 . gene 10857 13569 . + . ID=g9297;Name=g9297.t1 NODE_663_length_19333_cov_54.0809 . mRNA 10857 13569 . + . ID=g9297.t1;Parent=g9297;Name=g9297.t1 NODE_663_length_19333_cov_54.0809 . five_prime_UTR 10857 10948 . + . ID=g9297.t1.utr5p1;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . five_prime_UTR 11107 11285 . + . ID=g9297.t1.utr5p2;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . exon 10857 10948 . + . ID=g9297.t1.exon1;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . exon 11107 11393 . + . ID=g9297.t1.exon2;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . CDS 11286 11393 . + 0 ID=cds.g9297.t1;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . exon 11605 11721 . + . ID=g9297.t1.exon3;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . CDS 11605 11721 . + 0 ID=cds.g9297.t1;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . exon 12224 13569 . + . ID=g9297.t1.exon4;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . CDS 12224 13066 . + 0 ID=cds.g9297.t1;Parent=g9297.t1 NODE_663_length_19333_cov_54.0809 . three_prime_UTR 13067 13569 . + . ID=g9297.t1.utr3p1;Parent=g9297.t1 #PROT g9297.t1 g9297 MAADVSYRRESTSDSMEEQRKRFEEKLQIIEQNVQLPEHVRKLDDFEVMRTLGTGSFGRVLLSKDAKTGQYCALKVLKKERIVRTKQVEHVMNEKKLLATVNCPFVVNMIASFKDTRNLYIVLEYVNGGEMFTHLHTYGRFPSPMARIYAAEVAMGLNYLHNLDIIYRDLKPENLLLDHRGHIRITDFGFAKRVFDRTWTLCGTPEYLAPEIILSKGYSHAVDWWALGILIFEMLAGHAPFTDPNPMGIYEKIIAGRIAFPKHFKPDEIDLISHLCTADLTRRFGNMKGGVDDIKNHAFFNGIDWIALYQLKIPAPFIPNVKGPGDASNFDTYPEEQIQGLPPIDDPYIEIFKDF* # ORIGINAL: g9296.t1 original gene structure, not modified by PASA NODE_663_length_19333_cov_54.0809 AUGUSTUS gene 8077 10285 . + . ID=g9296;Name=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS mRNA 8077 10285 . + . ID=g9296.t1;Parent=g9296;Name=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 8077 8229 . + . ID=g9296.t1.exon1;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 8077 8229 . + 0 ID=cds.g9296.t1;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 8560 8652 . + . ID=g9296.t1.exon2;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 8560 8652 . + 0 ID=cds.g9296.t1;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 8768 8953 . + . ID=g9296.t1.exon3;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 8768 8953 . + 0 ID=cds.g9296.t1;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 9266 10285 . + . ID=g9296.t1.exon4;Parent=g9296.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 9266 10285 . + 0 ID=cds.g9296.t1;Parent=g9296.t1 #PROT g9296.t1 g9296 MLTFPDVVIALQIAVEGCAHGELDAIYAAVEELERRDGIKIDLLLCCGDFQAVRNESDLECMACPPKYRSMNTFYKYYSGEKCAPVLTVFIGGNHEATNHMWELSHGGWVAPNIYYLGHAGVVTCGGVRIAGWSGIFKEHDFEHGHFEVPPYDDRTMRSAYHIRRCDMLRLLQISGKIDVMLSHDWPTDIAKCGDLNRLLSKKAFLRDEIASGTLGSPPAADVLRALRPSFWFSAHLHVKYAAVARHPPASGPSEQDSRRAGQLGGSTGDDSNNSNNSDSSGSAEPLSLTRFLALDKCLPGRQFLQVIEIPSSTEDGSATGTPRLSYDPQWLAVVRRTASAMPTRRGQRVDPRRDASTWAAPTTDEVAEAARLAIDANGSLNIPPNFEITAEPYVPQQGGGRRRAFQSGPIRNPQTVHFCKWMQIQSPFDIAATGSAAPSHAGRDQEFTHAPLHTLQVRNEQTPVLVAVETNPDEITLDCEDD* # ORIGINAL: g9299.t1 original gene structure, not modified by PASA NODE_663_length_19333_cov_54.0809 AUGUSTUS gene 16891 19147 . - . ID=g9299;Name=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS mRNA 16891 19147 . - . ID=g9299.t1;Parent=g9299;Name=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 19028 19147 . - . ID=g9299.t1.exon1;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 19028 19147 . - 0 ID=cds.g9299.t1;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 18582 18800 . - . ID=g9299.t1.exon2;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 18582 18800 . - 0 ID=cds.g9299.t1;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 18359 18472 . - . ID=g9299.t1.exon3;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 18359 18472 . - 0 ID=cds.g9299.t1;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 17927 18138 . - . ID=g9299.t1.exon4;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 17927 18138 . - 0 ID=cds.g9299.t1;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS exon 16891 17719 . - . ID=g9299.t1.exon5;Parent=g9299.t1 NODE_663_length_19333_cov_54.0809 AUGUSTUS CDS 16891 17719 . - 1 ID=cds.g9299.t1;Parent=g9299.t1 #PROT g9299.t1 g9299 MRICLLENASARPDFTSILSWIDRINPNKGKSVIDKMAEMLEKYAGNLERLVLDRTEELVVEKHRTEQLLHSILPSRIVERLKSSPSAYIAERHESVTVFFSDIVGFTNMSRQVTPESVVTMLNEAFSIMDSLTLQYGLTKIKTIGDAYMTACGVPEPIADHVKRVAQFALSAMATLKLMMDPLGNPLEMRAGMHTGPLVAGVVGTRNFAYDLWGDTVNVASRMESNGAPGRVCTSPAVHAALCDEFEFESREAKTVKGQGLMVTYFLVREKDAEAREQRLSVVPRASLPSGPSHLGNMLFGHVIAQDEGRRGFLTPLAGSLASLVPSGGGHHRDPLGSRDIFGSRDVFGSQRQLLRAARNLENCDSMTGSMVDMGSMTGSFRHVKSARPSFSTVRSSISSALVVPMIEQSSADSGVPSRGGGARNSIDLKSRSMGSNGSATKGVIPLHRLAEPCVQESAAIKVAVDLSAGHVSESSDAAAKQASDSTTPANTMASE* # PASA_UPDATE: g3363.t1, single gene model update, valid-1, status:[pasa:asmbl_7199,status:12], valid-1 NODE_4293_length_1862_cov_38.2546 . gene 387 1687 . - . ID=g3363;Name=g3363.t1 NODE_4293_length_1862_cov_38.2546 . mRNA 387 1687 . - . ID=g3363.t1;Parent=g3363;Name=g3363.t1 NODE_4293_length_1862_cov_38.2546 . five_prime_UTR 1574 1687 . - . ID=g3363.t1.utr5p1;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . exon 1470 1687 . - . ID=g3363.t1.exon1;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . CDS 1470 1573 . - 0 ID=cds.g3363.t1;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . exon 1163 1245 . - . ID=g3363.t1.exon2;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . CDS 1163 1245 . - 1 ID=cds.g3363.t1;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . exon 860 957 . - . ID=g3363.t1.exon3;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . CDS 860 957 . - 2 ID=cds.g3363.t1;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . exon 387 492 . - . ID=g3363.t1.exon4;Parent=g3363.t1 NODE_4293_length_1862_cov_38.2546 . CDS 387 492 . - 0 ID=cds.g3363.t1;Parent=g3363.t1;3_prime_partial=true #PROT g3363.t1 g3363 MRKTDSRLELENAIENSVPFVDYTIEHEKLEEGARHIIANLKPNWPVDKLQFKQFTQGMTNKLMFCYVDGTEDAALVRVYGKKTEYLIDRDQEIVNVISFYGDGRGPEVYGRFHNGYCYGYIKGEPLDVD # PASA_UPDATE: g12327.t1, single gene model update, valid-1, status:[pasa:asmbl_5921,status:12], valid-1 NODE_3356_length_3661_cov_40.6732 . gene 84 3390 . + . ID=g12327;Name=g12327.t1 NODE_3356_length_3661_cov_40.6732 . mRNA 84 3390 . + . ID=g12327.t1;Parent=g12327;Name=g12327.t1 NODE_3356_length_3661_cov_40.6732 . five_prime_UTR 84 84 . + . ID=g12327.t1.utr5p1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 84 168 . + . ID=g12327.t1.exon1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 85 168 . + 0 ID=cds.g12327.t1;Parent=g12327.t1;5_prime_partial=true NODE_3356_length_3661_cov_40.6732 . exon 639 842 . + . ID=g12327.t1.exon2;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 639 842 . + 0 ID=cds.g12327.t1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 1180 1284 . + . ID=g12327.t1.exon3;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 1180 1284 . + 0 ID=cds.g12327.t1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 1630 1722 . + . ID=g12327.t1.exon4;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 1630 1722 . + 0 ID=cds.g12327.t1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 1884 2108 . + . ID=g12327.t1.exon5;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 1884 2108 . + 0 ID=cds.g12327.t1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 2659 2908 . + . ID=g12327.t1.exon6;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 2659 2908 . + 0 ID=cds.g12327.t1;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . exon 3179 3390 . + . ID=g12327.t1.exon7;Parent=g12327.t1 NODE_3356_length_3661_cov_40.6732 . CDS 3179 3390 . + 2 ID=cds.g12327.t1;Parent=g12327.t1 #PROT g12327.t1 g12327 NKVGAERTFKTMYTVQQRYMRDLEMIMRVFPDGFKVAPEVFKDSDVAKILNNIAEIYEFEKDFMFSLVDAKEAATSAADSGESFPLVGKYFQDAVLDEKMDLYLTYAENHLERKTAVEDVMKYKGAEAVMKSQGLVPSVYHVLPRLLLEPIHHVHHYMELLKTLQKCLAQRPDSKSADQLKSEASFLRQAETDMKLIYETTMTMLTKAHIDRTGANKMYRVDEELFSQIQNKITNWEGPALVKVVSELFRESDEMVVVTTTKETKKQKGRHMFLFDTLLLVCGPIKKEQEEAHHTRGFEYSINQKLRIASVELVANDSETDVDIQGGEGDNRVRITITCRSAADKKRWTEDIQYLIARAPLEKLLDKKLQEAEKFDMHDPMFALSPANYV* # ORIGINAL: g13116.t1 original gene structure, not modified by PASA NODE_2468_length_6162_cov_38.3539 AUGUSTUS gene 686 2562 . - . ID=g13116;Name=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS mRNA 686 2562 . - . ID=g13116.t1;Parent=g13116;Name=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 2239 2562 . - . ID=g13116.t1.exon1;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 2239 2562 . - 0 ID=cds.g13116.t1;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 1295 1822 . - . ID=g13116.t1.exon2;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 1295 1822 . - 0 ID=cds.g13116.t1;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 914 1112 . - . ID=g13116.t1.exon3;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 914 1112 . - 0 ID=cds.g13116.t1;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 686 702 . - . ID=g13116.t1.exon4;Parent=g13116.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 686 702 . - 2 ID=cds.g13116.t1;Parent=g13116.t1 #PROT g13116.t1 g13116 MASGQKMTREEFKKAKDLEEARKAGTAAPELDVEGNMINPHIPQYISQAPWYLNARGPGLQHQRRQDAEAEASSRLEEWYIRGEGTQKATKFRKGACENCGALTHKKKECAERPRKIGAKFTGDKIAADEATQLNLSLDFDGKRDRWNGYNPEDHMRIVEEYAKVDLAKKMLRAERLQRDGSEGDASDEKSKKEREKDASGANGDDADEDDEDVKDDEYRYGEDQDMPGQKHDDKKRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRENPYAEVGKDAKEVMFAGDNFVRISGDTTKMAQMQMFAWDAVDRGKDVHLQADPTKTELLHQQFKVKKQDLDGQRKTNIHELLP* # ORIGINAL: g13117.t1 original gene structure, not modified by PASA NODE_2468_length_6162_cov_38.3539 AUGUSTUS gene 3035 4899 . + . ID=g13117;Name=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS mRNA 3035 4899 . + . ID=g13117.t1;Parent=g13117;Name=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 3035 4117 . + . ID=g13117.t1.exon1;Parent=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 3035 4117 . + 0 ID=cds.g13117.t1;Parent=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 4337 4492 . + . ID=g13117.t1.exon2;Parent=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 4337 4492 . + 0 ID=cds.g13117.t1;Parent=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 4741 4899 . + . ID=g13117.t1.exon3;Parent=g13117.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 4741 4899 . + 0 ID=cds.g13117.t1;Parent=g13117.t1 #PROT g13117.t1 g13117 MRSRLIAPSCRHLLAAAGSVRCAGPAISLGPRGSLGAPALSPQQHLAPLIVNASNCRSRERRHFWSPARDGSTAAGGDSAAADWTGAMKLAESALGDKSRHTTGTLLGVGLHRVLDELPSAARNLLRLAGSDHPLSRAMRSYLFEDVRHVRSMIVLLMSRALGRHGERASTPDGDQSIRQGDGITDENVAEAEAQRSRAREDLATITQLIYQATRVHETVIEMTSVPRADRSDGAMFGNKMAVLTGDFLLAKSCVALAGLKSARVVELMSTAIGETMEGCLQDAHTMPKQSPSPASSLASASNSSSAADPAGKTVEECRRSVIKAGSLLSRACEAAAVLEKSEDLAESARNYGRAMGAALEIAEDVSYWGSHSKRADPPTRVLALPVAYAMESVGWLKDAVARGFSGDGDIAAAREYVASSGALDRSRAVCKEYGRLAIDALSHVPSSAEKDAMMRLAACVHAID* # ORIGINAL: g13115.t1 original gene structure, not modified by PASA NODE_2468_length_6162_cov_38.3539 AUGUSTUS gene 139 584 . - . ID=g13115;Name=g13115.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS mRNA 139 584 . - . ID=g13115.t1;Parent=g13115;Name=g13115.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 419 584 . - . ID=g13115.t1.exon1;Parent=g13115.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 419 584 . - 0 ID=cds.g13115.t1;Parent=g13115.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS exon 139 266 . - . ID=g13115.t1.exon2;Parent=g13115.t1 NODE_2468_length_6162_cov_38.3539 AUGUSTUS CDS 139 266 . - 2 ID=cds.g13115.t1;Parent=g13115.t1 #PROT g13115.t1 g13115 MVARILEKYGGEEHLEALPRELLLAQTEHYVEYSRTGKVIRGQEKAIPKSRYEEDVYTNNHTSVWGSFWDAGEWGYACCHSTQRNSYCTGEAGKQARK # PASA_UPDATE: g13118.t1, single gene model update, valid-1, status:[pasa:asmbl_4376,status:12], valid-1 NODE_2468_length_6162_cov_38.3539 . gene 5266 5979 . - . ID=g13118;Name=g13118.t1 NODE_2468_length_6162_cov_38.3539 . mRNA 5266 5979 . - . ID=g13118.t1;Parent=g13118;Name=g13118.t1 NODE_2468_length_6162_cov_38.3539 . exon 5804 5979 . - . ID=g13118.t1.exon1;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . CDS 5804 5979 . - 0 ID=cds.g13118.t1;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . exon 5561 5669 . - . ID=g13118.t1.exon2;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . CDS 5561 5669 . - 1 ID=cds.g13118.t1;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . exon 5266 5393 . - . ID=g13118.t1.exon3;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . CDS 5286 5393 . - 0 ID=cds.g13118.t1;Parent=g13118.t1 NODE_2468_length_6162_cov_38.3539 . three_prime_UTR 5266 5285 . - . ID=g13118.t1.utr3p1;Parent=g13118.t1 #PROT g13118.t1 g13118 MWLITSRTTARCIIESKTAALQEVSQHLSALAAAKDVIAGRLQRPFVGECIEVEAVYQESVSVIFSRIAALLASLPRQLDNIAWIKGLPQHDARLDPTLESLAAVQATFQSTHIELQSMQGKIHELAKAR* # ORIGINAL: g2813.t1 original gene structure, not modified by PASA NODE_4786_length_1247_cov_57.8763_potentialcontaminant AUGUSTUS gene 2 948 . + . ID=g2813;Name=g2813.t1 NODE_4786_length_1247_cov_57.8763_potentialcontaminant AUGUSTUS mRNA 2 948 . + . ID=g2813.t1;Parent=g2813;Name=g2813.t1 NODE_4786_length_1247_cov_57.8763_potentialcontaminant AUGUSTUS exon 2 948 . + . ID=g2813.t1.exon1;Parent=g2813.t1 NODE_4786_length_1247_cov_57.8763_potentialcontaminant AUGUSTUS CDS 2 948 . + 2 ID=cds.g2813.t1;Parent=g2813.t1 #PROT g2813.t1 g2813 SCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCSASGTCTCATGWTGANCNTCDTGYWGASCTACSCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCAASGTCTCATGWTGANCNTCNTGYWGASCTACSCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCSASGTCTCATGWTGASCNTCDTGYWGASCTACNCLNGATCNQGIGGTGACTCAANYYGTTCATNCVAATTCSSRGSCSATGLCMCSTGWTGTNCNSCATDYYGPSCTYCLASSTCS # PASA_UPDATE: g6171.t1, single gene model update, valid-1, status:[pasa:asmbl_3135,status:3], valid-1 NODE_196_length_32226_cov_54.0485 . gene 11125 13034 . + . ID=g6171;Name=g6171.t1 NODE_196_length_32226_cov_54.0485 . mRNA 11125 13034 . + . ID=g6171.t1;Parent=g6171;Name=g6171.t1 NODE_196_length_32226_cov_54.0485 . five_prime_UTR 11125 11239 . + . ID=g6171.t1.utr5p1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . exon 11125 11283 . + . ID=g6171.t1.exon1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . CDS 11240 11283 . + 0 ID=cds.g6171.t1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . exon 11402 11646 . + . ID=g6171.t1.exon2;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . CDS 11402 11646 . + 1 ID=cds.g6171.t1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . exon 11774 12319 . + . ID=g6171.t1.exon3;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . CDS 11774 12319 . + 2 ID=cds.g6171.t1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . exon 12467 13034 . + . ID=g6171.t1.exon4;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . CDS 12467 12549 . + 2 ID=cds.g6171.t1;Parent=g6171.t1 NODE_196_length_32226_cov_54.0485 . three_prime_UTR 12550 13034 . + . ID=g6171.t1.utr3p1;Parent=g6171.t1 #PROT g6171.t1 g6171 MTIGNAERRPHHTPGYCGFCPQFKYKFGESYGRTTANLFEDNAVVKSNSTVLAPTAYSERTLDSTGFGGSCYSYRERAAESSGQDLGPEPKVPGYTGYIPRSKLYFGRRYAEVSRMATDDFGRTLDSQRDEEHTYQETVRQQLLAPIERTHVSPTERTRALNRQKLPLTPITKELRDYEPKGTHDYAASPYSLPKDHPQKHFMPGYTGYVPKSEKYVGMSYQAVTHRAIDDFGSEKAYLEETRKLPMPRVPKMRTESPSTSHKMSESVPIPGFTGHVPGRLVLFGSSFGTSTKTAISMHSQRPVA* # ORIGINAL: g6174.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 19191 20465 . - . ID=g6174;Name=g6174.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 19191 20465 . - . ID=g6174.t1;Parent=g6174;Name=g6174.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 19557 20465 . - . ID=g6174.t1.exon1;Parent=g6174.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 19557 20465 . - 0 ID=cds.g6174.t1;Parent=g6174.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 19191 19277 . - . ID=g6174.t1.exon2;Parent=g6174.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 19191 19277 . - 0 ID=cds.g6174.t1;Parent=g6174.t1 #PROT g6174.t1 g6174 MAPVGGRSLRTRPQSNSGDNLTTNRAASQSSKEKENIPIVANRPKRAAASKVAPLPQKNAARRDSTSDSPTSPSSGSDYGADTKRELRARGAASQKTVEAIKREMPSAVVSRVTSTIVKSRATAAPPAATKRPRDNLSDVEDPFELSTEDLGGVLNTKRQRKDAKRASASAKASTPVKRGSVRNASASLSMLDTPSNTSFTASLPTGSPFQSTPSAGASSGAGSSSLDALLSPSLDPIPRRTPHSERPFNGNSSVLPAVSAKADPDTQASFVSAAGSDAGAVRDSMCSERGGFKKRSRTEAKKEMNAQLETQLADMRTHFAEVDDFVLEEE* # ORIGINAL: g6173.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 16962 18308 . - . ID=g6173;Name=g6173.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 16962 18308 . - . ID=g6173.t1;Parent=g6173;Name=g6173.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 16962 18308 . - . ID=g6173.t1.exon1;Parent=g6173.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 16962 18308 . - 0 ID=cds.g6173.t1;Parent=g6173.t1 #PROT g6173.t1 g6173 MAANEAAAGGGEGGEPYIAGDSREVPKYRRGSEVSVINAYSTDRKELKKELEALDKTKETAGLRMTKDQLELLKKIELLNNKKAMASSPSKKGSDGLSSSQSQAQLASQLATQFGSQSIATAADTAGDGNTADFNDFLLLSNNSEAGGDPPIAVAEQPAAGRGRRRSLSAMSNWKPVSFSALAAANNSTSTIENATAENSGVAAAAEATAAAAGGEASEGADATSALSSSASTQQLRMKRGRSFSTGSQLLRRNSILATSALKEGQLTEEDPKKSEVDTAAYYFAQRQQALDDLDNEFLDPSYRFRKEIEQLNALNQLTTDLQKKRADNEAAVVGRLNRRKTSVDMSASIGTMPVIVSVDKRPTPADFATQKFPTVAASEKADQPPPTLARRMSINRGVLLEALPQPNESLSSSSGGDTLPPVKSPEAADPPRLRRESIARPGSSSKK* # ORIGINAL: g6167.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 242 2970 . - . ID=g6167;Name=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 242 2970 . - . ID=g6167.t1;Parent=g6167;Name=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 2302 2970 . - . ID=g6167.t1.exon1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 2302 2970 . - 0 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 1994 2116 . - . ID=g6167.t1.exon2;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 1994 2116 . - 0 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 1752 1861 . - . ID=g6167.t1.exon3;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 1752 1861 . - 0 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 1437 1512 . - . ID=g6167.t1.exon4;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 1437 1512 . - 1 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 1098 1142 . - . ID=g6167.t1.exon5;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 1098 1142 . - 0 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 699 789 . - . ID=g6167.t1.exon6;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 699 789 . - 0 ID=cds.g6167.t1;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 242 302 . - . ID=g6167.t1.exon7;Parent=g6167.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 242 302 . - 2 ID=cds.g6167.t1;Parent=g6167.t1 #PROT g6167.t1 g6167 MMRPTGPAPSTTGTGVGISHQGMRHHHGNNHNAMHAVNANAEKHPSSAKSAKVRVVLRLRPFLKEEVAAGEGESPCIRMHESSAELWNYRAPPGEQTSLKFDFDACYPEQSTQMQIFESEIAPLLRRSMAGEDATVFTFGPTGSGKTFTMQGSQENPGIIPRSLEWMFNRIVGEDARQWKYDVSLSYLEIYNEKVYDLLVPKDADLAIREDATHKIFVPNLAKLPISTLADFERLYAQGTRNRSTAATKLNSHSSRSHAVLIVETRRREHAAPFRVQVGRTCLIDLAGSEDNRRTDNVGMRLKESGAINMSLFVLSKVIDAINEGSSRVPYRDSKLTRLLQTLNYASKSRQIVNKPFVHQTVQKPAPPVDQVRRVSDPTIDRADKKQPTKI # PASA_UPDATE: g6168.t1, single gene model update, valid-1, status:[pasa:asmbl_3134,status:12],[pasa:asmbl_3137,status:12], valid-1 NODE_196_length_32226_cov_54.0485 . gene 3500 5649 . + . ID=g6168;Name=g6168.t1 NODE_196_length_32226_cov_54.0485 . mRNA 3500 5649 . + . ID=g6168.t1;Parent=g6168;Name=g6168.t1 NODE_196_length_32226_cov_54.0485 . five_prime_UTR 3500 3511 . + . ID=g6168.t1.utr5p1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . exon 3500 3940 . + . ID=g6168.t1.exon1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . CDS 3512 3940 . + 0 ID=cds.g6168.t1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . exon 4035 4382 . + . ID=g6168.t1.exon2;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . CDS 4035 4382 . + 0 ID=cds.g6168.t1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . exon 4648 4691 . + . ID=g6168.t1.exon3;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . CDS 4648 4691 . + 0 ID=cds.g6168.t1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . exon 4823 5027 . + . ID=g6168.t1.exon4;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . CDS 4823 5027 . + 1 ID=cds.g6168.t1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . exon 5230 5649 . + . ID=g6168.t1.exon5;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . CDS 5230 5520 . + 0 ID=cds.g6168.t1;Parent=g6168.t1 NODE_196_length_32226_cov_54.0485 . three_prime_UTR 5521 5649 . + . ID=g6168.t1.utr3p1;Parent=g6168.t1 #PROT g6168.t1 g6168 MKHMNLQRNLSRSFRFAAFNRKNHFAPAILVIVSPFVLAALLRMASDKPTQPLLMIPGPIEFSDDVLRAVGEQSLSHVDPAFIESFGESLQLLRKVFVTESAQPIVISGSGTLGWDQVACNLMSVGDKALIVNTGYFGEHFGEAFNEYGIETAYVRGSVLGDAPSIGEIEGALSAGKFRVITITHVDTSTGVLTDVKAISAAVKRVSPDTLIVVDGVCASGAEELRMDEWGIDVVLTASQKALGVPPGLSILVASQRALEVHRTRTNPIRNYYCNWKNWVPIMQAYEGRKPSYFATPAVNLVRGLQVSLKEMLADGIDARFEAHRKAGAAVRRALTAMGLEMLPVSHAICANAMSAIRLPKGVAPTDLLPKIRAAGAVVAGGLHPLIKNEYFRIGHMGVSATAPGWPDVVVTINAVETALIACGVKVTPGSGVAALNA* # ORIGINAL: g6175.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 21407 26270 . + . ID=g6175;Name=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 21407 26270 . + . ID=g6175.t1;Parent=g6175;Name=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 21407 21439 . + . ID=g6175.t1.exon1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 21407 21439 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 21568 22164 . + . ID=g6175.t1.exon2;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 21568 22164 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 22292 22798 . + . ID=g6175.t1.exon3;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 22292 22798 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 23050 23153 . + . ID=g6175.t1.exon4;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 23050 23153 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 23434 23551 . + . ID=g6175.t1.exon5;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 23434 23551 . + 1 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 23761 23923 . + . ID=g6175.t1.exon6;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 23761 23923 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 24375 24490 . + . ID=g6175.t1.exon7;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 24375 24490 . + 2 ID=cds.g6175.t1;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 24888 26270 . + . ID=g6175.t1.exon8;Parent=g6175.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 24888 26270 . + 0 ID=cds.g6175.t1;Parent=g6175.t1 #PROT g6175.t1 g6175 MGKNAIIWFRKGLRLHDNPALLEACKDAVHVYPVFVIDPFFLVNNSYKVGVNRYNFLLESLRDLDASFIARGSRLLVLRGKPEEVLPRAFKDWNIDKLCFELDTEPYAKFRDGKIKELARAAGVEVYSPVSHTLYDTDTLVRRNGGRAPLSMGGFVKLLASVGPPPSVAPDAPDVIPPPDSTLPGAGFENTDVPTWESIGYKEAPTTPFKGGEKEALRRLEASMRDGKWVASFSKPETNPAAFDEPATTVLSPYLKFGCLSPRLFHTRLLSIYAKHKGHTTPPQSLEGQLLWREFFYTVGANTPSFDRMVGNPICRQIGWEDNEAFLEAWRDGRTGYPWIDAIMIQLKEWGWMHHLARHSVACFLTRGDLYVSWEKGKEVFDELLIDADHYLNTANWLWLSASAFFNQYFRVYSPITFGKKYDPDGKFIRKFIPALKDFPAKFIYEPWKAPIEAQRRSGCIIGKHYPHPIVDHAVVHKTNMAKIKQAFGAAKPSVKEEDDGSDNHSDDAGIPVLVVVGATGTGKSKLAIELALDVGGEIINADAMQRGRVPILVGGTNYYIEAVIWNNTLVASPDAIKGENDEDRIDVIPGKYQNSNELASVSAAAFASSVRLELDALDTPRLYTMLCDVDPDMSNRIHPNDRRKIVRSLEVHRTHGISHSALLAARQHSGGALSCGETLRFPRSLFLWVECDLGVLDPRLDRRVDGMLSRGLIEELSDHANALVRAKRDEDLSATTTATTMAVSTWPDFTRGSLQTIGFKEFHSFVFAMPVDDDDGEQTTDRAAREAGVEATKAATRRYARKQIAWIRKKLCARIAREHQRTHGEEGSTREEPGELDASCVLAGNLRHAACPIFRRLNASDLSLWNANVRDIAVQTVRAFLSSCSSSPMLPGASSSLLSPPSQDDSIVSLLCDESHLIASGALSFTAAASSVDPSPDRLTRRVCERCDGKIIMGEKEWNDHQRSKGHRRRGSRKRAGDWPAGGTGKRRATSTCADGETCGDQTVE* # ORIGINAL: g6177.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 28535 32132 . + . ID=g6177;Name=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 28535 32132 . + . ID=g6177.t1;Parent=g6177;Name=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 28535 28780 . + . ID=g6177.t1.exon1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 28535 28780 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 28971 29049 . + . ID=g6177.t1.exon2;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 28971 29049 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 29284 29717 . + . ID=g6177.t1.exon3;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 29284 29717 . + 2 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 29935 30267 . + . ID=g6177.t1.exon4;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 29935 30267 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 30536 30634 . + . ID=g6177.t1.exon5;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 30536 30634 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 30881 30931 . + . ID=g6177.t1.exon6;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 30881 30931 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 31039 31190 . + . ID=g6177.t1.exon7;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 31039 31190 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 31316 31444 . + . ID=g6177.t1.exon8;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 31316 31444 . + 1 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 31766 31853 . + . ID=g6177.t1.exon9;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 31766 31853 . + 1 ID=cds.g6177.t1;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 32100 32132 . + . ID=g6177.t1.exon10;Parent=g6177.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 32100 32132 . + 0 ID=cds.g6177.t1;Parent=g6177.t1 #PROT g6177.t1 g6177 MNMDDPYSKDVSEAFELGDGIEFSEEGDDAGDGRTASGRRSLSDSESSEAPPRRKRRDTDLQERMPDGLKGPPADGAGRGDSFRTASVELVPGSQVSSYVLIKKLRDLGTDGSAPIPLMHIEYYDTAGLGSKEGPHSPTLSHSAPLWPAQYGAIPSYFGGLLAASPTGEESPPPEFDLGEYADELREDMSGMPPTDNEQRAIDIVMYKQSAALDAAVGASPTTMTVRRQAGPVESSRRKYKLREKFAKGAYGEVWRAVRPGDGAHYILKRMFVEKGDDVRLSGLREIHYGRKLRSLGHIARFVEYFEGGGSDAGSELWLVFHDEGIALHEFLYSRIDDGAFARMERSLFWRRLKTDPNGAPVMKAIMKQLLTGIAICHEHNVTHRDIKPENLILSYINERPELMLADFGSAVERDFPDHLYPPEGPSKDEATLDYAPPEVTFSMLPFDSGRPESYDIWSAGIVFMEMILGTPKVFTIDDRARARIDLQMQDKSEEVKEAAYRFKAMQQYCLYPPNSEATLDEESLSDMLGTSVMKPKDWRTEWALIS* # PASA_UPDATE: g6172.t1, single gene model update, valid-1, status:[pasa:asmbl_3133,status:3], valid-1 NODE_196_length_32226_cov_54.0485 . gene 13244 16358 . - . ID=g6172;Name=g6172.t1 NODE_196_length_32226_cov_54.0485 . mRNA 13244 16358 . - . ID=g6172.t1;Parent=g6172;Name=g6172.t1 NODE_196_length_32226_cov_54.0485 . five_prime_UTR 16110 16358 . - . ID=g6172.t1.utr5p1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . five_prime_UTR 15777 15843 . - . ID=g6172.t1.utr5p2;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 16110 16358 . - . ID=g6172.t1.exon1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 15710 15843 . - . ID=g6172.t1.exon2;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . CDS 15710 15776 . - 0 ID=cds.g6172.t1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 15127 15493 . - . ID=g6172.t1.exon3;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . CDS 15127 15493 . - 2 ID=cds.g6172.t1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 14671 14762 . - . ID=g6172.t1.exon4;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . CDS 14671 14762 . - 1 ID=cds.g6172.t1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 14288 14400 . - . ID=g6172.t1.exon5;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . CDS 14288 14400 . - 2 ID=cds.g6172.t1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . exon 13244 14133 . - . ID=g6172.t1.exon6;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . CDS 13918 14133 . - 0 ID=cds.g6172.t1;Parent=g6172.t1 NODE_196_length_32226_cov_54.0485 . three_prime_UTR 13244 13917 . - . ID=g6172.t1.utr3p1;Parent=g6172.t1 #PROT g6172.t1 g6172 MATSTPASVPTIQVKFGGATDIGNKSENQDEWEAKQRPDGVFLGVYDGHGQNGRKIAVFTKENLPNVLRDDPNFKKDIKKAIRNTFLKMQDIVKASGHDIYLSGTTATIALIIGTKLIVANVGDSRAVLGREDSKGQVKAVVLTKDHTCEDKTEVERLKKAGARVEPMVHQGAYLGPPRCWKGSMPYPGQCVSRTIGDDVAHSIGVTADPEIKEVDLTSKDKFIIVGSDGVWDGLDNQTVVDLVAKHKDAQKASEAVVQEALRGLDKEEIDDNVTAVIGFFSKP* # ORIGINAL: g6169.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 5888 9193 . - . ID=g6169;Name=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 5888 9193 . - . ID=g6169.t1;Parent=g6169;Name=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 8807 9193 . - . ID=g6169.t1.exon1;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 8807 9193 . - 0 ID=cds.g6169.t1;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 8585 8650 . - . ID=g6169.t1.exon2;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 8585 8650 . - 0 ID=cds.g6169.t1;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 8111 8397 . - . ID=g6169.t1.exon3;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 8111 8397 . - 0 ID=cds.g6169.t1;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 6575 7808 . - . ID=g6169.t1.exon4;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 6575 7808 . - 1 ID=cds.g6169.t1;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 5888 6253 . - . ID=g6169.t1.exon5;Parent=g6169.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 5888 6253 . - 0 ID=cds.g6169.t1;Parent=g6169.t1 #PROT g6169.t1 g6169 MDQFNFDFDNDDDQDLLPPTAFVRAPQRHSTESNQRVQQQHAQQQQQEQQEQQQQQQQQPRAPSASSGNAASQEYPAHRLPSAVVGSVGAVKSGTSKSAARKVAKTTYRPSLIEDAHADYAQMMDRNDHGVQYQRIKKCEIPRPLFKNHIKEGTTHPLVHKEMCAKCYEFWHKEDHAAWACDHETGDYFYCILCGEAAPPECDLQLYLCDGERCKRGFHLKCTRAVFGANEAAIMGVEGAEYKCPFCVWQDSPAARNPALRDDWQQRHPLVQKQAYYVDPLTNMQANPPRATATFEHLAAINSVHNANAIVGAPRVTATKDRPAPTRVRSMALRDTKQATDTDSVQSARAQDATGEEAAVVQKPTKATTTKQMKKKDAERAAMDWHQKKEVEHAAEHRRKRGPEAAASCEERHTKVPRLESASSATETMNSGGGASSIAPTASAVAVKVENPGIHLVTMWDSCCTTLTTLTDRLDVPVKSYYRWDDEDPISEAIFRDKVKLAGIAANGMVNASALASTVGSDVLSNSNLLVASVRLVPPGVTDHSEDERYFDDSRTEKIGRTAVTIEGEGLERLSEAVKVIERSRAKAGLFFYILEVTDNLAESARTLVSQRLGVAQYRKLNASEVSDVYRPRLYWTNIADSEGAKPLYLSWVQKLMPLAMESEFTPREDRLDPKGEPAVKVRILRRPAIAHAFEDSGFRTQNHLPILYSRKTPQSRTLTVTECERLMGFAPDHTLCRRASGAGDLTTSERQDAVGRAINLPALLFFLDKARDLLCEGV* # ORIGINAL: g6170.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 9603 10769 . + . ID=g6170;Name=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 9603 10769 . + . ID=g6170.t1;Parent=g6170;Name=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 9603 9786 . + . ID=g6170.t1.exon1;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 9603 9786 . + 0 ID=cds.g6170.t1;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 9891 10029 . + . ID=g6170.t1.exon2;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 9891 10029 . + 2 ID=cds.g6170.t1;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 10123 10224 . + . ID=g6170.t1.exon3;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 10123 10224 . + 1 ID=cds.g6170.t1;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 10619 10769 . + . ID=g6170.t1.exon4;Parent=g6170.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 10619 10769 . + 1 ID=cds.g6170.t1;Parent=g6170.t1 #PROT g6170.t1 g6170 MYSRASGDQILRQSGRALQAQPPHTALQQLPPQIPIIVHHNLEGHEVIRCHLSLDPVYRIRPSTTLPESTIVFPKSSVAFKLVTDLKKLAMFDDRGNFLRLSPVEIAMIHAFAAQFSQTYLICTLDPLNPTHQQIFFELQDRLSQALVLQQGLGSIRNVSIAPKEALLDCSMDDRSATRLLGFFAIDHVPV* # ORIGINAL: g6176.t1 original gene structure, not modified by PASA NODE_196_length_32226_cov_54.0485 AUGUSTUS gene 26442 27434 . - . ID=g6176;Name=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS mRNA 26442 27434 . - . ID=g6176.t1;Parent=g6176;Name=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 27262 27434 . - . ID=g6176.t1.exon1;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 27262 27434 . - 0 ID=cds.g6176.t1;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 26969 27108 . - . ID=g6176.t1.exon2;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 26969 27108 . - 1 ID=cds.g6176.t1;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 26649 26809 . - . ID=g6176.t1.exon3;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 26649 26809 . - 2 ID=cds.g6176.t1;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS exon 26442 26531 . - . ID=g6176.t1.exon4;Parent=g6176.t1 NODE_196_length_32226_cov_54.0485 AUGUSTUS CDS 26442 26531 . - 0 ID=cds.g6176.t1;Parent=g6176.t1 #PROT g6176.t1 g6176 MQSIRRLAAAGLRVHTVRPQHTVRAVAFLNSRQHTTGSSQTIPPFHLAFPVHSLEEARRFYGGILGLDEGRSSAKWIDYSLRGHQIVCHLVSGDYRGMDHFNPVDGDEVPVPHFGLAMTVPDFHAFATRLRSHGIKFIIEPHLRFQGKPGEQWTMFFKDPSGNNLEFKAMSNPDNLFAKYYVPADSK* # ORIGINAL: g12276.t1 original gene structure, not modified by PASA NODE_2492_length_6073_cov_36.6999 AUGUSTUS gene 5461 6047 . + . ID=g12276;Name=g12276.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS mRNA 5461 6047 . + . ID=g12276.t1;Parent=g12276;Name=g12276.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 5461 5665 . + . ID=g12276.t1.exon1;Parent=g12276.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 5461 5665 . + 0 ID=cds.g12276.t1;Parent=g12276.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 5938 6047 . + . ID=g12276.t1.exon2;Parent=g12276.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 5938 6047 . + 2 ID=cds.g12276.t1;Parent=g12276.t1 #PROT g12276.t1 g12276 MADSEPLLGAHEDEFRGPINVISDDVISPVRISVNNLCYSIDNKEILKDVTCELRPGRVVALMGPSGAGKTTLLNVLCGRARGTVEGQLLVNGTALDAKKFKVC* # ORIGINAL: g12275.t1 original gene structure, not modified by PASA NODE_2492_length_6073_cov_36.6999 AUGUSTUS gene 228 4175 . + . ID=g12275;Name=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS mRNA 228 4175 . + . ID=g12275.t1;Parent=g12275;Name=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 228 302 . + . ID=g12275.t1.exon1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 228 302 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 457 543 . + . ID=g12275.t1.exon2;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 457 543 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 811 972 . + . ID=g12275.t1.exon3;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 811 972 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 1250 1356 . + . ID=g12275.t1.exon4;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 1250 1356 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 1643 2372 . + . ID=g12275.t1.exon5;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 1643 2372 . + 1 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 2591 2680 . + . ID=g12275.t1.exon6;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 2591 2680 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 2868 3016 . + . ID=g12275.t1.exon7;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 2868 3016 . + 0 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 3248 3399 . + . ID=g12275.t1.exon8;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 3248 3399 . + 1 ID=cds.g12275.t1;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS exon 3604 4175 . + . ID=g12275.t1.exon9;Parent=g12275.t1 NODE_2492_length_6073_cov_36.6999 AUGUSTUS CDS 3604 4175 . + 2 ID=cds.g12275.t1;Parent=g12275.t1 #PROT g12275.t1 g12275 MAFSQNRQEPKVRIIATKATSEELQDELAVIQEKIDLLYDEVNDTYTFKNKIAQEVAYSLLLVVHRRALHIAIASWYEKVYGPVLSPVIAHHFVKAEEYARAVPQVEMATISAARVSANIEVVRLAKQAFEIDETYLGGAFRNRHYRWYYLKGVGHFGLGEIVEAIECFESSLKLMGSFVPQSSIGTQFKLVSQRLTHAWHRILPKSVYQFPADVLDSQKHSEPVEATASRGMPNGAVLEALQDEGSGSGTPTKDMSERAVDARERLAEGIARTNDRREKERLKEEMKRRMLREKMRRTLTECQAWQMLFLSLVLMEEGQYAFAASMAAMNLAEKIPQCAQLVASYASMGLCATAMGNERLQKYYNARAVKASEKVAGIACAGLVKESNGMYLACAGLFRSSVTELREALMIFERVQDGKRGNETRGALGDVLYWLGDFEASEVYAKECIELAQNMKDRRMLGWARRTLCRIRLAQGNLEEADTYCREAREVAVARSDFVLADALTALVALRMRKYGEATRSADDTLKALREISFPIVYYTLDAYEFVSEVYACVLREAPPRDDNQRADIESRATEATALLRRFARRFPFALPSYYLCIGRLLLAQGKLAKADHKLSKGLDLAEPKKRVYHTSQIQMLLSQTHRSIAKQRKSADDSLAVTYMAQAQLGFTEIGSEYFLSLSPQDEETLAAMLRDSTLNLFETGKSTV* # ORIGINAL: g4458.t1 original gene structure, not modified by PASA NODE_2753_length_5231_cov_39.0023 AUGUSTUS gene 1613 3927 . - . ID=g4458;Name=g4458.t1 NODE_2753_length_5231_cov_39.0023 AUGUSTUS mRNA 1613 3927 . - . ID=g4458.t1;Parent=g4458;Name=g4458.t1 NODE_2753_length_5231_cov_39.0023 AUGUSTUS exon 3294 3927 . - . ID=g4458.t1.exon1;Parent=g4458.t1 NODE_2753_length_5231_cov_39.0023 AUGUSTUS CDS 3294 3927 . - 0 ID=cds.g4458.t1;Parent=g4458.t1 NODE_2753_length_5231_cov_39.0023 AUGUSTUS exon 1613 3048 . - . ID=g4458.t1.exon2;Parent=g4458.t1 NODE_2753_length_5231_cov_39.0023 AUGUSTUS CDS 1613 3048 . - 2 ID=cds.g4458.t1;Parent=g4458.t1 #PROT g4458.t1 g4458 MSDNVDAVDARRSDSQHADWRGPEFSAAVRAENARDSARADIEVRMDHGTSPSIAHTAMDDEAPLELSLDSLTLAMEHLVMHTFHRLELAVTAATPRVLQAADSCRTWCGSAIASTAYRAVEMSGMRACLAAGMAHTQAAAHQSSILVLDGVSACARTLSPRLSTAAAGVSDRMRDGRIRAQTVFIVLLCIQAFVGGCALVAFSMHVGGLEDDLPHRTTSNLLARGHNGRNFIYVDPRSNEQAKMSPAQRDHHVNAYGSFAEGQLLDDDTNNGNAPPNEGHVNGVNVGDVADGTGALNALIPDDHAMEADTKPRRTTHRKAPPPASVPEFTAGCLDRFSRGNWCRNSTRWCMGGIPFGSGTSQTRLCQFRHLSPVDVAYNGHQKWILFLGDSVVRIDYEELLNMLVNAKAEGLVAGRLRVKGEVKHPGPIDADSSGDVHCPQYDVDYNITRCGKSARVDNTVGEFKFSFMRKVYPYSVADRAFIDEWWDTEDSVPRPDYIVVHVGRWNMRHENGGANTTYTDELIRYLDDLRTVFPSSRILWLTEPAQLPIKCTWSGAGANKTQSCTCAHTGEPKDASQVSVDAAVKQYGLPVLDRHATTVQLPTWFHAARQRSSRYSIPHSCAYVAGLPAVQTVHGVLNYMFRMWDPLPTPTPSPSPSPTQHTPTAQAMTHAKRKRSRGAVDDRVRSR* # PASA_UPDATE: g4457.t1, single gene model update, valid-1, status:[pasa:asmbl_4935,status:12], valid-1 NODE_2753_length_5231_cov_39.0023 . gene 41 1274 . + . ID=g4457;Name=g4457.t1 NODE_2753_length_5231_cov_39.0023 . mRNA 41 1274 . + . ID=g4457.t1;Parent=g4457;Name=g4457.t1 NODE_2753_length_5231_cov_39.0023 . five_prime_UTR 41 72 . + . ID=g4457.t1.utr5p1;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . exon 41 123 . + . ID=g4457.t1.exon1;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . CDS 73 123 . + 0 ID=cds.g4457.t1;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . exon 558 687 . + . ID=g4457.t1.exon2;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . CDS 558 687 . + 0 ID=cds.g4457.t1;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . exon 841 1274 . + . ID=g4457.t1.exon3;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . CDS 841 941 . + 2 ID=cds.g4457.t1;Parent=g4457.t1 NODE_2753_length_5231_cov_39.0023 . three_prime_UTR 942 1274 . + . ID=g4457.t1.utr3p1;Parent=g4457.t1 #PROT g4457.t1 g4457 MVDLYSKKEIGTKVDIWALGILLYRMCFEKTPFDDGSKLAIMNAKVNIPADKFAVFHPLLRTLLNADLDKRPTATELLATLEQMAADFGPEAR* # ORIGINAL: g6219.t1 original gene structure, not modified by PASA NODE_147_length_34817_cov_43.0486 AUGUSTUS gene 23133 28078 . - . ID=g6219;Name=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS mRNA 23133 28078 . - . ID=g6219.t1;Parent=g6219;Name=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 27990 28078 . - . ID=g6219.t1.exon1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 27990 28078 . - 0 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 27418 27560 . - . ID=g6219.t1.exon2;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 27418 27560 . - 1 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 26949 27236 . - . ID=g6219.t1.exon3;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 26949 27236 . - 2 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 26448 26777 . - . ID=g6219.t1.exon4;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 26448 26777 . - 2 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 25977 26178 . - . ID=g6219.t1.exon5;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 25977 26178 . - 2 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 25498 25636 . - . ID=g6219.t1.exon6;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 25498 25636 . - 1 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 25095 25214 . - . ID=g6219.t1.exon7;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 25095 25214 . - 0 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 24763 24906 . - . ID=g6219.t1.exon8;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 24763 24906 . - 0 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 24151 24377 . - . ID=g6219.t1.exon9;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 24151 24377 . - 0 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 23649 23790 . - . ID=g6219.t1.exon10;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 23649 23790 . - 1 ID=cds.g6219.t1;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 23133 23303 . - . ID=g6219.t1.exon11;Parent=g6219.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 23133 23303 . - 0 ID=cds.g6219.t1;Parent=g6219.t1 #PROT g6219.t1 g6219 MDGSIDLTSSPESAAHKRRRVGGINGPFPSAGDVRHPHARGAETDDEAFARKLQEQFDEEDREYRRRVIRDIELASALANDMPVTHALTTDAPIGNRDTSNGKQTGETTSEGQTKTDDAGSAGGALASRALFLATERRKRPRADDSGEATANANAYANDNVKYRSSNDISGARNDSSLHVGRVNARDIARDQAASPHASSHSSSPTTATVQPHVTPTPTVAFRLTRCGGISANSNAGTVGLADILAMEPDLVMSVQFNYKVDLDWVMSCYSAAQRQCRMVLVHGERLPDVQRAVAQRALAYSDVQIVIPKLPDSFGTHHTKMMILFSRDHARVVVHTANLVPGDWGCKTQGVYLSPLFPRMASAATGSPYSTSSVGLRFGKDLLAYLHAYNDRRINEVAAMLLAFDFSAANVALVASVPGRHRSADLNKWGHRKLLSLLAQRRPDPNPQPSVLIGQFSSIGSLGNDENRWLCGEFFSSLNAGPAQSRLVTSDFRLVFPTVENVRQSLEGYAAGGSIPYSYANHEKQKYLNGRFCRWSASISGRSLAMPHIKTYGRFAVNGRSLTWFLLTSSNLSKAAWGSLEKNASQLFIRSYEMGVLFLPELWNPQTAVMFERSTPLETTLPPTTPLTVRFPVPYDIPTALYRQRGFIAGALVHRGCRVKSPL* # PASA_UPDATE: g6217.t1, single gene model update, valid-1, status:[pasa:asmbl_1720,status:12],[pasa:asmbl_1723,status:12],[pasa:asmbl_1724,status:12],[pasa:asmbl_1725,status:12],[pasa:asmbl_1726,status:12], valid-1 NODE_147_length_34817_cov_43.0486 . gene 1982 13131 . - . ID=g6217;Name=g6217.t1 NODE_147_length_34817_cov_43.0486 . mRNA 1982 13131 . - . ID=g6217.t1;Parent=g6217;Name=g6217.t1 NODE_147_length_34817_cov_43.0486 . five_prime_UTR 12891 13131 . - . ID=g6217.t1.utr5p1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 5889 13131 . - . ID=g6217.t1.exon1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 5889 12890 . - 0 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 5572 5667 . - . ID=g6217.t1.exon2;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 5572 5667 . - 0 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 5183 5253 . - . ID=g6217.t1.exon3;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 5183 5253 . - 0 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 4660 4828 . - . ID=g6217.t1.exon4;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 4660 4828 . - 1 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 3913 3948 . - . ID=g6217.t1.exon5;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 3913 3948 . - 0 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 3612 3661 . - . ID=g6217.t1.exon6;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 3612 3661 . - 0 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 3402 3415 . - . ID=g6217.t1.exon7;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 3402 3415 . - 1 ID=cds.g6217.t1;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . exon 1982 2994 . - . ID=g6217.t1.exon8;Parent=g6217.t1 NODE_147_length_34817_cov_43.0486 . CDS 1982 2994 . - 2 ID=cds.g6217.t1;Parent=g6217.t1 #PROT g6217.t1 g6217 MRALQRIFFVGFALSVFVVSASVRGVVGDDASSRDLAPFPSDESREPIDPTPTNTVVITTGGNGEDPIPLTDVFDAVESAYARGDAVIQVNLNGIYHVGAHNNRTLMIRSGTHVTLGVSPDANTTAIECASEVALPAAPYPLPLPLLVPLFDVRDGASLVIAGLLFRQCSAGTLARVAAGARLDLLVTTIASMGCAFHRHVHAAADGVSETQRLPSFDVAGTVLFDNSQFTCENVTNPEASSQLAADAFASPSAETWLQSVVSPLFVSRGNGSVTLSSCYTSQWSLGLMLNTSRLTIQSSIVSKCFGGPCVLAIDNTTISASYGNFESPNVVRLQGHAHLSMLNVIIAARSWHRASSNEPLCIVLHAGDHSSLSLSGDMGVHLSGCDGFQLDGHASARASDVTAVVYEPVQFVWKTGGNAALALVGGSMSATAQALTTRVAMGVFGGFSSITFAGVALTYTVQKLVDNGFEDLPELPQIIIADDATAVLTNVTLSAEMGYIGGNFNGRHALKASGRASLWINGMTTQMCPGVVHALGHAVVVMVNSVIAGNNLVGGDSPFVDLWYADVEKGGLFYIEGSAVFEGTGLRVHRLMRAGMGGIGHVAGNASATISDTVVTVAGACQALGGGFYMTEGGTLSVRNSTFSSVFSLCDFHKYSYDGYGGFIFLNGRSRAVLEDLSLDLVLASYGGFIYAVENSHVTVDNVRVEAAYVNAKGGALYLGGNATVVLRNVFVTDAFAAIEGGFLYAGDTSMLDASDLELRSLESYRGSIYSARDSATVRIRNTTSAGHTCELSVLQGVIIGPAYYGARKMNLIREDPDNDALDGASPGNVGCGMYASHSSIVSLNSMSVRTVKTPFGGGGIALVGNASCELVNVTLAGIDAAVDAGAMRVANHASLTAKSLLIADLSARFYGACGMASGNALVSIDGLYANNTLSFGAGCFYLIDSASLTILHGTASHMGTSARGGFVTAGGSSTVRMSELSVRYTYAAGAGFALVTDTARLILHSVRVHAATSTTANGAAIVVESEGSCTVSNSVISKCDSAKIGGALFVSSSSPVTITNTTISECTATSGAALAAFGDSSVTLAHVTMHNCSVASAGGAVYAAENSAVNLTSVTSERTSTSGGSGGFLATAGTAHVNMTHCVVSRASSSAGVGGAIDATGRSVVVVDTSEFAGVSSHLAGGFLHQKGLSAVHLTSVTVFGATTESLSPGVAVRGGARLFMVDVTIFDALRLPGMGPGWISASDGAIGAYINVQCVNCTGELLKFDFYSMIFSDAFLPGTSIYFDEEGTKTPEFLMSIVTGSHRFLPLTTSQQWKGAVIDLETPFATFKVSYDGLLLRVRTAAALVIGSISAATEVSVLPTGTLLLYDIDLSTSPITVDGVLIMENSRVIDSPITVRNSGWASFDACTFAVRDGSGRSSIGGSGKAGSVPALVVLSDQTFTTVAGLIVGTHFATVGNGGFVSLSGESVLSIAGATVESVASSGSGGFVSVEQPTGGDFSTIRLSIRGVQIARCASGANGGFLSLRGNVVVTVSDCVIHASTADSQGGLVFAGETTQLDIKRTNISFSSSMLNGGVLNVIGSASVTLDTVFVTDASSAANGGFAALSPVAGSAGVPSLTANKITLSGAIASKNGGVFFSSGSEIHIRDSVLRDVAVGATGGLVHLAGDTPSHLSFADSIFDTFHADIRAGLVSLTDTSVVSLLRCRAESISSKLDAGCIAVGGGVLSIAASEMVGCHAIGGGGGGVFVSGGAVDIVDSVFSNPKADLGGGLCMLQGIAVASFVNVTVVNSSTLNVGGGVFHVSGRSRLSADGLTVRTSSAYGIGGSIAMDGRATAEFDGLDVSDSAATFGQGGLASVIGSTVFKLNNSVVRNTSSDAQGGMVHVTGVGSAVLSNVTADHVMSRVSDGGAFAAEFDATLTLSNVNVADASTSFRGGVVFMGGSARLTAVGLVSVRSVAAEGGLMHIAPDAAVSVTNARVSAASADGNGGCVYSKSPRVVIVGGHYDNCAAGVVSATYGQGGFLYYDAADTDGSALAIRGVSVDGARAASAPVVFSTRKLTMSGGEFVSVGSTTSQFGNASAAVLTPAAALVFRVADSSTLRRRAAVDAPAFTSTQFSGDALPDFSIFIQDAYGLAAFAPPTVPLAIRLTIKGNGTTTCALSGDLTRTFSRSSRVDYSNVRVSSSTVPANCTMGVVPDNFLYSEGADLFKNTALQTVQLTSCSAGTSLQPDAAGLYSCVSLPVGAPTAAATSSTSTTLIVAVVVSVVIVCAGVFIVAFAIVRRNRRKWNMQQLEDFARHMENVQPDLARLEIPRDSVELQEVLGEGAFGVVHKAQVVVGTRMRVCAVKTLKSNVSVEQRIEFISEAEIMVNLSHANVVNIIGVVTDGDPMFIVLEFAPHGSLKSFLSKLERHRNANRKMNFNFIFAHFARDIAEGMAYLSRQKIVHKVGQNGFGDYVGKVADFGLSKDLGNKEYYRRSAKHVWSYGVVLWEIWTFGTNPYPGIANNEVLSHLKGGGRLDAPPSCPPAIYDVMLMCWQHEPEDRPTFDKLAAMCAEIQSEGKTDEEGGEQFGAMTMMGGTIDNSDSVNIAGVNIAGVSGSVHTSVALQRGPNRGGSYANFTPSALSAAQAVVDGNADHDNYDNSQNKHTNNTDGSYHNPNPAAETNLQNEQGMYKPFALPRSPGSATYANFASPHSTTGPVRQKASGASSAHASPATLRMSVKMRGHRDSAQARGFGGNGEEARYAQPELHEAPSTSKGHRASPAPTARSDAHVGAPGVFSPYANAEDFDHSDASSPMDGFHSLTVEFEDEDVQESGV* # PASA_UPDATE: g6220.t1, single gene model update, valid-1, status:[pasa:asmbl_1721,status:3], valid-1 NODE_147_length_34817_cov_43.0486 . gene 29392 30932 . - . ID=g6220;Name=g6220.t1 NODE_147_length_34817_cov_43.0486 . mRNA 29392 30932 . - . ID=g6220.t1;Parent=g6220;Name=g6220.t1 NODE_147_length_34817_cov_43.0486 . five_prime_UTR 30807 30932 . - . ID=g6220.t1.utr5p1;Parent=g6220.t1 NODE_147_length_34817_cov_43.0486 . exon 30574 30932 . - . ID=g6220.t1.exon1;Parent=g6220.t1 NODE_147_length_34817_cov_43.0486 . CDS 30574 30806 . - 0 ID=cds.g6220.t1;Parent=g6220.t1 NODE_147_length_34817_cov_43.0486 . exon 29392 30067 . - . ID=g6220.t1.exon2;Parent=g6220.t1 NODE_147_length_34817_cov_43.0486 . CDS 29518 30067 . - 1 ID=cds.g6220.t1;Parent=g6220.t1 NODE_147_length_34817_cov_43.0486 . three_prime_UTR 29392 29517 . - . ID=g6220.t1.utr3p1;Parent=g6220.t1 #PROT g6220.t1 g6220 MARSTRPDEFKDFTNERIRIIDTELEGIFADIRSIAASANGDSNNYVNAEALKGLLAKEEQLRSEKQILLKAKALYKEAVSQRAAESGLTEPLLPKSAVPHREETAPAPQYWQPPPTQWQAQAPTQWQTPSIQWQPQPTQWQEPAVQSYQHAPGQHNIQSSGDAAVCNMPGCRAAPSGICMGTYDAKSYFCGCYCGSLTDRVCMARHSGKSSGQAFCLYHLVDTPTTYHQSGVLTIRLCTECKKYEREREECCGSVDCTD* # PASA_UPDATE: g6221.t1, single gene model update, valid-1, status:[pasa:asmbl_1722,status:12], valid-1 NODE_147_length_34817_cov_43.0486 . gene 32154 34639 . - . ID=g6221;Name=g6221.t1 NODE_147_length_34817_cov_43.0486 . mRNA 32154 34639 . - . ID=g6221.t1;Parent=g6221;Name=g6221.t1 NODE_147_length_34817_cov_43.0486 . exon 34382 34639 . - . ID=g6221.t1.exon1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . CDS 34382 34639 . - 0 ID=cds.g6221.t1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . exon 33989 34115 . - . ID=g6221.t1.exon2;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . CDS 33989 34115 . - 0 ID=cds.g6221.t1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . exon 33524 33634 . - . ID=g6221.t1.exon3;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . CDS 33524 33634 . - 2 ID=cds.g6221.t1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . exon 32889 33045 . - . ID=g6221.t1.exon4;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . CDS 32889 33045 . - 2 ID=cds.g6221.t1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . exon 32154 32668 . - . ID=g6221.t1.exon5;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . CDS 32467 32668 . - 1 ID=cds.g6221.t1;Parent=g6221.t1 NODE_147_length_34817_cov_43.0486 . three_prime_UTR 32154 32466 . - . ID=g6221.t1.utr3p1;Parent=g6221.t1 #PROT g6221.t1 g6221 MLAHSHMFVHHFLPLHCFLAHFLPSYTTGGKIMVWPLESGASATVVDGAHADAVTHIAWAAKDGSQTSVGLSASRSDIKTWTVTPEGKWTAPLVLDGESGGLSGLGFGANGDIAWAPSHSANFRIASADNKPRKVAVVSSVGSHVTACAVAPHLLLAHSSESLLNVRVLPSGRLAASIEIPRGSAVYRLASDGNIAVLAGGSSAHVIRPVKSGAAAGASLLSLGRSPLCDDAFVVGSDGESDEDEDNVEDVPVISKTSGAASPTTAAVDGPETPAEAKGWCAVM* # ORIGINAL: g6216.t1 original gene structure, not modified by PASA NODE_147_length_34817_cov_43.0486 AUGUSTUS gene 182 1225 . + . ID=g6216;Name=g6216.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS mRNA 182 1225 . + . ID=g6216.t1;Parent=g6216;Name=g6216.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 182 1225 . + . ID=g6216.t1.exon1;Parent=g6216.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 182 1225 . + 0 ID=cds.g6216.t1;Parent=g6216.t1 #PROT g6216.t1 g6216 MSRSTSTRALVLGCALAAALCASLATALPVRPLNSDPNPSTAALRTEAPTLALPRKVVYIDYRDVDWSSGDKTVMAAVDAGYNVVLLAFYLAVQGPADMALVWAQLTQEQQIAAVNYAHSKGAIVMVSAGGATDLPWSKFSTGEAYGTAVGQWAKANNLDGVDYDLENFAPHFSAAPLTDTQLVTFLATASITAKNFVSFVSHAPQAPYFGKEGDASSWAGVTGGYSGVEKASNGAIDWYNVQFYNQGATCYTTYDGLFTSSTSDCAVFPGTSVGEIASYGVPLSKITVTKYLLAGDGSNGYVSASDLATMFRKAETSIDYTAGVSCWAYAAQDSAAWISTIYPSAA* # ORIGINAL: g6218.t1 original gene structure, not modified by PASA NODE_147_length_34817_cov_43.0486 AUGUSTUS gene 14157 22357 . + . ID=g6218;Name=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS mRNA 14157 22357 . + . ID=g6218.t1;Parent=g6218;Name=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 14157 14210 . + . ID=g6218.t1.exon1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 14157 14210 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 14487 14578 . + . ID=g6218.t1.exon2;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 14487 14578 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 15007 15127 . + . ID=g6218.t1.exon3;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 15007 15127 . + 1 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 15370 15579 . + . ID=g6218.t1.exon4;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 15370 15579 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 15796 16125 . + . ID=g6218.t1.exon5;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 15796 16125 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 16284 16354 . + . ID=g6218.t1.exon6;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 16284 16354 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 16698 16787 . + . ID=g6218.t1.exon7;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 16698 16787 . + 1 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 16937 17126 . + . ID=g6218.t1.exon8;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 16937 17126 . + 1 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 17322 17482 . + . ID=g6218.t1.exon9;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 17322 17482 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 17675 17760 . + . ID=g6218.t1.exon10;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 17675 17760 . + 1 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 17865 17955 . + . ID=g6218.t1.exon11;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 17865 17955 . + 2 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 18302 18393 . + . ID=g6218.t1.exon12;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 18302 18393 . + 1 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 18830 18913 . + . ID=g6218.t1.exon13;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 18830 18913 . + 2 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 19192 20357 . + . ID=g6218.t1.exon14;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 19192 20357 . + 2 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 20559 21816 . + . ID=g6218.t1.exon15;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 20559 21816 . + 0 ID=cds.g6218.t1;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS exon 22068 22357 . + . ID=g6218.t1.exon16;Parent=g6218.t1 NODE_147_length_34817_cov_43.0486 AUGUSTUS CDS 22068 22357 . + 2 ID=cds.g6218.t1;Parent=g6218.t1 #PROT g6218.t1 g6218 MTTKTAPAWPSQDGGESKILLERVFGVTSSGNAALSCNPATGILAYPAGCVVVLQHPFQNKQSHLHHGSNKSILSLAFAENGQYLVVGETGHNPSVLIWDLETGCVVAEMSGHTHGVAAVAFSPGEKYVVSVGVVHDGSVHVWNWRLGTRVASGKVSSKVNSISFSELGTHFVTAGNRHVKFWYIDGDKAAKPSSVSASGAASGPVASAKPFVLEGKSGVLGSHRNNNFTAIACGRGTSASKTVFAVTESGILCAFGTGRLLEKWVDLKVAKANAISVTDRFIACGCNDGVVRLFDPKNLQYVATVPKPHPLGVDVAAAVDPSQLFARHAGDVYAHVTGVVQDMDGQRVTCLYSDRSLYSWDVRSTQKIGKIISHLFHSGAIWDLQVLPLPRATGDDSGMTSFSGSKKYGGVVTCSADGTLRHWAVDDAETANAHANIYSHELLRVAYAGSTHDSLRNIIPGAPLADQDGKEPAVGIRCARVSADGRYLAAGDTAGNVRLFLLPGLTEVARVEAHDSEVLAVDFSPATAVTGHRYVASSSRDGLIHLFDGTPDPYGKGITLSLVQTFDDHSASVTSVRFASASPDSLSLVSCSADKSVIFRNFDPATGMFVRHQSVAGKSAVYDMEVDCTQKYATTANQDKAIRIYSVKTGKNIRVYRAANHVFPDCPDATAHAATVLTTGGLIRVRVDPSGIYVFASGADKMLRVFDFYSGECLATASGHGEVITAMAVTPDCRHVITASGDGCIFVWALAPSLSDAMLDRMSELRQLPTMGSATGGSVASSVSVGSHPGAPSAPLNAWGSAGVAPGQQQYAVDARSPRIAASGIAESPLDPARQQKDELHALLDAASANPGHVTPSQRKRAADGQSDNSNNSNVHTPIHGSHSPSALDDSGMVEPDPQLYRFSLTPLPSWARKQVLAERGMPSVTPAKKDAAPKPPTGRGKWAQRIDPVIPAASANDALEDADDDTGAESTSAGDDEVIMYPPPDADARAASDALGEPDRFEVTCKPDAHGSSSALGDSANSNLSSAGTGTLPHPPADADAAANDEEESASAAELRASNNQHAQAVVPSRGRTDSSSSFAASTGGPEEFAPPDFLRTHFESLEAAAAAAASGSGVPSDATSDCGGPSRSRSNNNNNNNGSSGTHSSRLSISSRFLSHSQQRGLRDAFLGGGVGVGASAVANDAQQQQQQHGDRKSGDSEGGPTPTSSLPVGTAPATTVVVSRRKDDLSKEVERTRKRLQRLGYSKGSDKDRDDAPEKASTQLSQGADAVAVGDAAKNEGTVPQQQQALHALTVSVPIAGASVPSDIASSVDDVSAVRPRESERDRERERDRDKAQSSPRGPAAAGSAEPPKAQTPAKRVQDIREVDAETVAARTAAAVTSSISDALSLLERTNDQPNQPLLTASVRSALAEAHDRIGAALGLDTGHGSRRLDDALSSPDVRDLLERYSQMLVDAVGRKK* # PASA_UPDATE: g1131.t1, single gene model update, valid-1, status:[pasa:asmbl_7453,status:12], valid-1 NODE_4585_length_1430_cov_29.3889 . gene 95 1196 . - . ID=g1131;Name=g1131.t1 NODE_4585_length_1430_cov_29.3889 . mRNA 95 1196 . - . ID=g1131.t1;Parent=g1131;Name=g1131.t1 NODE_4585_length_1430_cov_29.3889 . exon 853 1196 . - . ID=g1131.t1.exon1;Parent=g1131.t1 NODE_4585_length_1430_cov_29.3889 . CDS 853 1196 . - 0 ID=cds.g1131.t1;Parent=g1131.t1;5_prime_partial=true NODE_4585_length_1430_cov_29.3889 . exon 425 560 . - . ID=g1131.t1.exon2;Parent=g1131.t1 NODE_4585_length_1430_cov_29.3889 . CDS 425 560 . - 1 ID=cds.g1131.t1;Parent=g1131.t1 NODE_4585_length_1430_cov_29.3889 . exon 95 261 . - . ID=g1131.t1.exon3;Parent=g1131.t1 NODE_4585_length_1430_cov_29.3889 . CDS 95 261 . - 0 ID=cds.g1131.t1;Parent=g1131.t1;3_prime_partial=true #PROT g1131.t1 g1131 HADIIIPRGADNLVAIDLIIHHVRTKLEERGHVFRGNLLNLHVGDKMPDTLHVLKQSSQVVGLHTIIRNRETPRDEFIYYSQRLMRLLIEYALGFLPYTPTTVETPRGQLYEGQRFLGSLCGVSIVRAGVTMEMALRDVYKDVRIGKILIQTDEETGEPQLHYCSLPKNMKQSHVMLMDATIASGAAALMAIRVLLDHEVPEENILFTSLLASPQ # ORIGINAL: g11785.t1 original gene structure, not modified by PASA NODE_2486_length_6097_cov_42.9866 AUGUSTUS gene 3847 5826 . - . ID=g11785;Name=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS mRNA 3847 5826 . - . ID=g11785.t1;Parent=g11785;Name=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 5670 5826 . - . ID=g11785.t1.exon1;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 5670 5826 . - 0 ID=cds.g11785.t1;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 5497 5531 . - . ID=g11785.t1.exon2;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 5497 5531 . - 2 ID=cds.g11785.t1;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 4874 5254 . - . ID=g11785.t1.exon3;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 4874 5254 . - 0 ID=cds.g11785.t1;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 4451 4616 . - . ID=g11785.t1.exon4;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 4451 4616 . - 0 ID=cds.g11785.t1;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 3847 4094 . - . ID=g11785.t1.exon5;Parent=g11785.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 3847 4094 . - 2 ID=cds.g11785.t1;Parent=g11785.t1 #PROT g11785.t1 g11785 MIVDALCRYGGTLVLDGDMSAGKLTSFVLYTLTLAMAFAFISSLYGEFMQAIGASARIFELLDRKPSIPTRGGDRFEGDFKGHIAFENVRFRYPSRDDVEVLRGVSFRVEPGQVCALVGPSGQGKSTIIALLERFYDPTEGRILLDKMPLSSMDPSWVHTQIALVSQEPVLFCSSIAENISYGRANATRDEIIEAAKLANAHEFILSFGEGYETLVGERGVRLSGGQKQRIAIARALIMNPKILLLDEATSALDAESEHLVQEAIDRAMLDRTVLVIAHRLSTVRNASKILVINNGSIIEEGTHDELIANEGGTYMKLVRRQMHRIDG* # ORIGINAL: g11784.t1 original gene structure, not modified by PASA NODE_2486_length_6097_cov_42.9866 AUGUSTUS gene 359 3055 . + . ID=g11784;Name=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS mRNA 359 3055 . + . ID=g11784.t1;Parent=g11784;Name=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 359 411 . + . ID=g11784.t1.exon1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 359 411 . + 0 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 578 645 . + . ID=g11784.t1.exon2;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 578 645 . + 1 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 767 851 . + . ID=g11784.t1.exon3;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 767 851 . + 2 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 1222 1380 . + . ID=g11784.t1.exon4;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 1222 1380 . + 1 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 1575 1715 . + . ID=g11784.t1.exon5;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 1575 1715 . + 1 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 1993 2151 . + . ID=g11784.t1.exon6;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 1993 2151 . + 1 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 2496 2628 . + . ID=g11784.t1.exon7;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 2496 2628 . + 1 ID=cds.g11784.t1;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS exon 2756 3055 . + . ID=g11784.t1.exon8;Parent=g11784.t1 NODE_2486_length_6097_cov_42.9866 AUGUSTUS CDS 2756 3055 . + 0 ID=cds.g11784.t1;Parent=g11784.t1 #PROT g11784.t1 g11784 MEAKIKEANGLVAEAEKLCQKTMFRWTADWDAAAPLLDKAANLYKAAKSFEKAKETFRKASTAHYKAKAIFHAAKSLENAALLAKEMKQPTEAAGYYEEAVSMYREDGKTDTAGLAYEKAAKAMVECQREEKAIEFFLGAAEVWEIDGKDRQCTENYKRAVSLLVKKKSYEKAIGVLRQQIRGLIKVNQLHNVYHNYLSIVVILLATDDFIAAERAYDEFLRETPQFASSDQSRSCDAMLTAFNAHDDEAFRAVTAAQHFTYLDNEITKMARTMKGGSTSYKPASQPTVVKRAEPLQKASSAATGAGQSSPSPTAPAQAKSASPYVGGHAPEVAHDRHNESDDEHSVNTPAEPSTPLYEDEPSVL* # ORIGINAL: g7962.t1 original gene structure, not modified by PASA NODE_3899_length_2548_cov_38.5111 AUGUSTUS gene 1970 2230 . + . ID=g7962;Name=g7962.t1 NODE_3899_length_2548_cov_38.5111 AUGUSTUS mRNA 1970 2230 . + . ID=g7962.t1;Parent=g7962;Name=g7962.t1 NODE_3899_length_2548_cov_38.5111 AUGUSTUS exon 1970 2230 . + . ID=g7962.t1.exon1;Parent=g7962.t1 NODE_3899_length_2548_cov_38.5111 AUGUSTUS CDS 1970 2230 . + 0 ID=cds.g7962.t1;Parent=g7962.t1 #PROT g7962.t1 g7962 MVVTRLMHGRCDFVVKDASQTAVLRQLPIYRRINWLHMVIIGVPIVVSVVALLTVPMRWQTALLAFVFNLLGGLGITAGYHRYRTQ* # PASA_UPDATE: g14437.t1, single gene model update, valid-1, status:[pasa:asmbl_1991,status:3], valid-1 NODE_1564_length_10459_cov_97.1866 . gene 3599 10459 . + . ID=g14437;Name=g14437.t1 NODE_1564_length_10459_cov_97.1866 . mRNA 3599 10459 . + . ID=g14437.t1;Parent=g14437;Name=g14437.t1 NODE_1564_length_10459_cov_97.1866 . five_prime_UTR 3599 3924 . + . ID=g14437.t1.utr5p1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . five_prime_UTR 4148 4518 . + . ID=g14437.t1.utr5p2;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 3599 3924 . + . ID=g14437.t1.exon1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 4148 4879 . + . ID=g14437.t1.exon2;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 4519 4879 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 5307 5394 . + . ID=g14437.t1.exon3;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 5307 5394 . + 2 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 5724 6057 . + . ID=g14437.t1.exon4;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 5724 6057 . + 1 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 6363 6615 . + . ID=g14437.t1.exon5;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 6363 6615 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 7053 7516 . + . ID=g14437.t1.exon6;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 7053 7516 . + 2 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 7729 7969 . + . ID=g14437.t1.exon7;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 7729 7969 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 8266 8375 . + . ID=g14437.t1.exon8;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 8266 8375 . + 2 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 8672 8924 . + . ID=g14437.t1.exon9;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 8672 8924 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 9178 9299 . + . ID=g14437.t1.exon10;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 9178 9299 . + 2 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 9603 9689 . + . ID=g14437.t1.exon11;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 9603 9689 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . exon 10153 10459 . + . ID=g14437.t1.exon12;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . CDS 10153 10314 . + 0 ID=cds.g14437.t1;Parent=g14437.t1 NODE_1564_length_10459_cov_97.1866 . three_prime_UTR 10315 10459 . + . ID=g14437.t1.utr3p1;Parent=g14437.t1 #PROT g14437.t1 g14437 MSHRESRGGGSLLPTVTTSASGPRGASLGARRVFIAASLAGLLYFVLCMLLFWRLDEYSKLEDAYRETLVEVSHLKSQVERISERDGLNPAAAAPPSSGGLDDPTTGMRSHGTRALFGMDVLPTMTEAQYDALIEQGTSMWCTGDTKKTRICRAKNICYAPRQGEFVVLHGNSTVISGVPKSRYEPALLDMASLDDHNTQYFHYIDLPVSSVSKLKPSNFAYADGTNFLFRRFHASNIMHVLHDDLIPLFHTMRQYAPSGKSAGLYSEHTRLVMMEGWSHHSHFGLYHLLAAGERGVSNGMQYDSRNNDTFVGKIILVNEFARDKLTCFQDAVIGLSKETTWYQYGFTEPQGPIPDKQGSGVYVRHFVDHIRRLLNAKPREYPFAGPSSSTRGLPQQLLTNSNHKGQANNENRKGDEVRAAAIREGAEANARDAGEGEEGETEEAKCAAMYHAWVERRAGSGPDYKTVARKADDTVAEYADRVSQAKIKAELEWSVAESEEILQRDNNCPIVAIFSRTRNRLLLNQLELAIALEDMLEMPVLLVSMETHPFESLARILSRTALAVSLHGSMLAMAMFMPRGSAVIELFPFGIPAENYTPYKTLAGLDGMQIAYRAWVNKNESATVGHAYRPANQGGLNHLSKEMREKVINTPDVPTHLCCSDPHWLYRIYQDTYANVRDVLKLCADAIQEAKTMRSWYYQGARTFLPAPVRAVSCGSATKNTITVQWNAPWNAQYLKNLEYQVYAAETNIAYVTSATRVTIEGLHPETSSQFWVRAGVALSRDEDAERLYGPFSPVLVCTTAHAVPLKGVLPPVGKRARVDDRE* # PASA_UPDATE: g14436.t1, single gene model update, valid-1, status:[pasa:asmbl_1990,status:12], valid-1 NODE_1564_length_10459_cov_97.1866 . gene 186 2666 . - . ID=g14436;Name=g14436.t1 NODE_1564_length_10459_cov_97.1866 . mRNA 186 2666 . - . ID=g14436.t1;Parent=g14436;Name=g14436.t1 NODE_1564_length_10459_cov_97.1866 . five_prime_UTR 2384 2666 . - . ID=g14436.t1.utr5p1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . five_prime_UTR 1956 2106 . - . ID=g14436.t1.utr5p2;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 2384 2666 . - . ID=g14436.t1.exon1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 1774 2106 . - . ID=g14436.t1.exon2;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . CDS 1774 1955 . - 0 ID=cds.g14436.t1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 1402 1501 . - . ID=g14436.t1.exon3;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . CDS 1402 1501 . - 1 ID=cds.g14436.t1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 747 863 . - . ID=g14436.t1.exon4;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . CDS 747 863 . - 0 ID=cds.g14436.t1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 549 589 . - . ID=g14436.t1.exon5;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . CDS 549 589 . - 0 ID=cds.g14436.t1;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . exon 186 374 . - . ID=g14436.t1.exon6;Parent=g14436.t1 NODE_1564_length_10459_cov_97.1866 . CDS 186 374 . - 1 ID=cds.g14436.t1;Parent=g14436.t1;3_prime_partial=true #PROT g14436.t1 g14436 MGTAPKTSSASGSCRNHPRWSLSAYLRASHAVPLWQCADTIRYISLHDNKYIRYFQGHSDRVVGLSVSPKDDTFLSASADRTVRLWDTRSPNCQGLMQVGGNAVLAFDATGVIFAVAVNSESVKLYDVRDYHKGPFEEISFKDGVERVYWTDIASDPTGKHFLVSTDSDVLYLMDAFTGARKQTYSGHSNQSKMPLRGRFSPDGQFVVC # ORIGINAL: g628.t1 original gene structure, not modified by PASA NODE_1223_length_12918_cov_40.1237 AUGUSTUS gene 156 730 . + . ID=g628;Name=g628.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS mRNA 156 730 . + . ID=g628.t1;Parent=g628;Name=g628.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 156 249 . + . ID=g628.t1.exon1;Parent=g628.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 156 249 . + 2 ID=cds.g628.t1;Parent=g628.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 493 730 . + . ID=g628.t1.exon2;Parent=g628.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 493 730 . + 1 ID=cds.g628.t1;Parent=g628.t1 #PROT g628.t1 g628 VISASFVKRTKSLREFPPYKNRVWVACVVICLVLQSAFVAVYNAATQSDIITFTLSDVPWYAYVLGLCWVLPLALLNEHAKQHDCRLHLRTQKRARLLFGTKLGMHSPV* # PASA_UPDATE: g629.t1, single gene model update, valid-1, status:[pasa:asmbl_860,status:12], valid-1 NODE_1223_length_12918_cov_40.1237 . gene 3182 4941 . - . ID=g629;Name=g629.t1 NODE_1223_length_12918_cov_40.1237 . mRNA 3182 4941 . - . ID=g629.t1;Parent=g629;Name=g629.t1 NODE_1223_length_12918_cov_40.1237 . five_prime_UTR 4910 4941 . - . ID=g629.t1.utr5p1;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . exon 4829 4941 . - . ID=g629.t1.exon1;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . CDS 4829 4909 . - 0 ID=cds.g629.t1;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . exon 4126 4285 . - . ID=g629.t1.exon2;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . CDS 4126 4285 . - 0 ID=cds.g629.t1;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . exon 3182 3933 . - . ID=g629.t1.exon3;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . CDS 3248 3933 . - 2 ID=cds.g629.t1;Parent=g629.t1 NODE_1223_length_12918_cov_40.1237 . three_prime_UTR 3182 3247 . - . ID=g629.t1.utr3p1;Parent=g629.t1 #PROT g629.t1 g629 MQRHEMPCVFLIRAEADDGSGVDKYEAEFTSRGWLAVSIPVLTFTFVNENVLLSALHRPDAYSGVVLTSPRAVHAIAAATASHPSAVLSAWSTKATYAVGRVTAEEARRLLGWTSCGADCGGAESLSAYIVAQHVPPRDVLADALDHTDGQTQQDQQHIGRQQHPRQTAPLLFPCGNNRRDALPIALSAAGVTLAECVCYESTVDPAFTTRFRAAIDSHGIPQCVAVFSPLGTQPAVDAVRAAVGCEDSMRVPFAAIGTTTAGALLEKSGVHAAVAVKPTPAHLADAVCARAVGVSVDSTRAAHSTPD* # PASA_UPDATE: g631.t1, single gene model update, valid-1, status:[pasa:asmbl_862,status:3], valid-1 NODE_1223_length_12918_cov_40.1237 . gene 9632 11816 . + . ID=g631;Name=g631.t1 NODE_1223_length_12918_cov_40.1237 . mRNA 9632 11816 . + . ID=g631.t1;Parent=g631;Name=g631.t1 NODE_1223_length_12918_cov_40.1237 . five_prime_UTR 9632 9829 . + . ID=g631.t1.utr5p1;Parent=g631.t1 NODE_1223_length_12918_cov_40.1237 . exon 9632 10311 . + . ID=g631.t1.exon1;Parent=g631.t1 NODE_1223_length_12918_cov_40.1237 . CDS 9830 10311 . + 0 ID=cds.g631.t1;Parent=g631.t1 NODE_1223_length_12918_cov_40.1237 . exon 10706 11816 . + . ID=g631.t1.exon2;Parent=g631.t1 NODE_1223_length_12918_cov_40.1237 . CDS 10706 11564 . + 1 ID=cds.g631.t1;Parent=g631.t1 NODE_1223_length_12918_cov_40.1237 . three_prime_UTR 11565 11816 . + . ID=g631.t1.utr3p1;Parent=g631.t1 #PROT g631.t1 g631 MRHSAAFVLLAVSVHVASALAFDGDDYNYCRAGFPDAAAYSPVADATLVSLQLVTRHGDRAPNSALPHENVDWVCSPDEARTQAADESFWTIKRTLIPDDHPFRSTSWGGDCEPGQLTYLGAKMTRELGAVLRSIYIDRLGFMPSTLEDSRDIAVRSTAVWRTQQSASNLLGGLYPRESRGAKASSIAVNNYPDALETMTGNSVLCARLAALFAAQAASKEYQDMMEAHKGLLAELARITGTANNSAWAGSFDHFADQFHTRTCHGLPLPCAADNSTDCVTRDMAERTIAMRDWEYLYDNYLFRRVDTARAGVGSFLGEIVRNMRRAAAGGPDHVRLRMYSGHDGTIAALLGALNQGGWRHPPYAANLIFEVWRKHAGAVRSGNVGGGIRGGAESGHVVRVMYNGRWLTPFGSRDGVSGAALDEFVRDSMEVVPDDYRAECMHTDI* # PASA_UPDATE: g630.t1, single gene model update, valid-1, status:[pasa:asmbl_861,status:12], valid-1 NODE_1223_length_12918_cov_40.1237 . gene 5327 8944 . - . ID=g630;Name=g630.t1 NODE_1223_length_12918_cov_40.1237 . mRNA 5327 8944 . - . ID=g630.t1;Parent=g630;Name=g630.t1 NODE_1223_length_12918_cov_40.1237 . exon 8581 8944 . - . ID=g630.t1.exon1;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . CDS 8581 8944 . - 0 ID=cds.g630.t1;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . exon 7718 8402 . - . ID=g630.t1.exon2;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . CDS 7718 8402 . - 2 ID=cds.g630.t1;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . exon 6335 7292 . - . ID=g630.t1.exon3;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . CDS 6335 7292 . - 1 ID=cds.g630.t1;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . exon 5327 5973 . - . ID=g630.t1.exon4;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . CDS 5581 5973 . - 0 ID=cds.g630.t1;Parent=g630.t1 NODE_1223_length_12918_cov_40.1237 . three_prime_UTR 5327 5580 . - . ID=g630.t1.utr3p1;Parent=g630.t1 #PROT g630.t1 g630 MGDQTFSNLAPALAQTFVIILLGYVLGRLKIVPVEAARAIGQYVSLISLPALLFVKMATLDFGTIDWIFLAGVTLAKSAVFLLVALLTIVMKAGRPNRAAHAGLRGIFATQSNDFALGLPIVQALYGNTQPTYAGFLYLVAPISLILLNPIGFVMMEYGAQRERVSVEETFSTLAGPGSRRPPGIPWLRITKNVVTNPIVFMCVLGIAGNFAFDQHVPKTLAMILQPLGDSFSGCSLFCLGLSMVGKLSKLKRKGVMVPLLLIACKSLVMPIISQHIISALGGSEDLSMYGFVYGTFPTAPSVPFYAFDYNIGGDMIAAAMVMGTLLSAPMMFVTAKMAAINIGTSDTSEYDGVVRDAAVDIGYVAIVASFWVMVILLYRRRFMRFPYYAVFFLALSQFAFPFAGSFCALEANSVGNAVRFAVIFCGILASRGWTVALAFNAYLVRVKGEVAARSLSAWMHVIGWGVPLLSIAPLVYAGKETFGDDKSLHCWFLYGRTQFLVTTVTLSVCLVACLVLMILIKRHQRAMSIGSNGRAIRNYQGNAYVALDDGDVKDGGSDATRAGVVNVDHASGPYLDGDASGNASSDEEGSINSFTDAQESALSGDARRRLREARARASLPLSDSSSFTDGPSSLVDEGIATGSSSSEVLVVDPLDDIKEMEVPGENDSMAPVAFLQLRVHDGHHKTDVRLVDGTYFPLFRHQLFVLYGCISMALGISVCFYNFLKERPTGLQVEIEFIDSAVLFGQGIVTFCLFGVQKSLLKPYAGWFKTLRARLSLTSWGTHKSGKVKTCGKSQTAR* # ORIGINAL: g632.t1 original gene structure, not modified by PASA NODE_1223_length_12918_cov_40.1237 AUGUSTUS gene 11919 12881 . - . ID=g632;Name=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS mRNA 11919 12881 . - . ID=g632.t1;Parent=g632;Name=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 12764 12881 . - . ID=g632.t1.exon1;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 12764 12881 . - 0 ID=cds.g632.t1;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 12516 12556 . - . ID=g632.t1.exon2;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 12516 12556 . - 2 ID=cds.g632.t1;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 12268 12342 . - . ID=g632.t1.exon3;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 12268 12342 . - 0 ID=cds.g632.t1;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS exon 11919 12083 . - . ID=g632.t1.exon4;Parent=g632.t1 NODE_1223_length_12918_cov_40.1237 AUGUSTUS CDS 11919 12083 . - 0 ID=cds.g632.t1;Parent=g632.t1 #PROT g632.t1 g632 MRALLLHLQIKFLEDTNAALADDVTRQSKLIRAYAIETYVGDDPLDPAAPKRKSILSKAAGAVSHVPGVSQAAGAVKKMATGDSAAKEKAKKEAQRKLQLALEESMAKNIALQEQIENVDAELRRAKRKAAE* # ORIGINAL: g2177.t1 original gene structure, not modified by PASA NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS gene 96 5388 . + . ID=g2177;Name=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS mRNA 96 5388 . + . ID=g2177.t1;Parent=g2177;Name=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS exon 96 1197 . + . ID=g2177.t1.exon1;Parent=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS CDS 96 1197 . + 0 ID=cds.g2177.t1;Parent=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS exon 1508 5302 . + . ID=g2177.t1.exon2;Parent=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS CDS 1508 5302 . + 2 ID=cds.g2177.t1;Parent=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS exon 5369 5388 . + . ID=g2177.t1.exon3;Parent=g2177.t1 NODE_2636_length_5582_cov_42.8442_potentialcontaminant AUGUSTUS CDS 5369 5388 . + 2 ID=cds.g2177.t1;Parent=g2177.t1 #PROT g2177.t1 g2177 TKGRFRKYLLKKDETRYTASTATLAAAKRAVAGSVPIPITPSARNSRALEEIESDDISLVRREMVRGHEYIQMAHRLLSPLDVSEMGDASARPSSMFADDDADDDSFSLPPVKSNQKHESSSDDHVRENDRRSDAGALDLSASSGGEEWASKADQSGCASDDDSGDRSRGGDKGGRKAVSFALPLEQAEGERSPSAGDSGAFVADSDEESAQEGSKSSPSPRRKQPYRTQTATHRSDLDTDDGISIAIKGGASSVDDLRDVGGHTYEPPPPHIAADAHAASSTERGRTTGNNESVPAGSGSYSFRPLGEEQHAKSGSCENLFEGIASDDDDDDQRADADDEDADRHGHGHGRGTAGKGKGDRPKGSSATRLNALVILDWNRYPGFDVPDNPLLRPSKAMTLECWVYSLCADQPPNSVIVAKTRDGNDGYCLIAGRRGFVQFYTAGWLDNDFCTSVRIRARQWTHIACVSDGEEISMYVDGELDDVMPCKGGVLYPSMRHPPLTIGRLHYNSDIPCGFYGKIADVRLWSRALSQAEICAGMRATLKVDVAKEIGLRAWYRFATDAPEDDSSGNDMHGMLDDDARVELDSFPIVEGNHYDGESDGSNSGAEENEENERSNSTYASEEWEVDDEENERRRELGAALRVQLEQNGIGTPSNASADACEYQQPNPNHQKCDVQSNGEATCNSDAGDRSDCAVSATVTDPETLQANKECSPWTAQTPSSSSAQTRPEKAKVRRLSVGKASSDSALFVPASPFANSEPTITLSIATPGVTDAEHLASYPSLPRLFSEAQSSSSPPGGPESKTLTEHDGTEGVTLSRKSSLEVVYPPGNDDGYYAMSHADVLKKQLLGDHLSAETLSSIESDKSLNGSAMSLDTSFDRSSPKAPSPRDIVPRSASLMNVFRSSDGSFLTKSTIRAGIDSPERKRSDASPMGFLSRRNSKDRDKTDSAQSLVQLLQLQLHHQQQQQQQQQQQQQPQQSTTSSTATQGGNPFKGMGRRSSSINLFGGGDSVSRRSSSTNIPLTSLNTEPSQNAPRRISASTISAAGLASMEDNSPMISPVPFDGPPATQSDAIEAHHTAESGEVTPMHHKTDVHDLENSPPTVSTESMLLPSFGSPALIQTPATPSVEFSNSPFELPGQSAPANDAGVEGGDDSKRPVGTVAQPATSFLHHRVALIDMVPEDGSFSDLQARLDIEKQHLQLAMQRQLQQEQLVQHQRHLQRRNSETTVPAIDKVTMANIVGSIPDSPLSNASTSDGTPIQSYAVLAALSLASASDEGMGSGDAFVAPTPAGSVKSASVASVPTPAQIAANAASMGRRRASVSDIPFGPHGHIAHTVHAPQPERKMSEIGKSLTTSYEALPTLYSRGQSIPSVVAVGPQGPSFSLSLERGAFGGSPLNAASGVNTPQKGRAASLSSPGTASALEKALMNVSNSTLLDRRLSASFLATFAHATPLATATTSPSNEIRRTSSAHSASTPERRISSDSSQLGRRLSLTHVFEDIAGIVVKPQSSTSPNQRKSINSRTPSVERLHDALLAQFNSSHQTVTSPGSNSLAPQTPQHKQMSDFLRQSFEFFPAGMWSLPGTPGVTDRLASSDPLPAVAPSIVIEPTHRLSLPNVPTSPGSMSMAGSIYDEDTTTKK* # ORIGINAL: g270.t1 original gene structure, not modified by PASA NODE_3676_length_2976_cov_17.9386 AUGUSTUS gene 1 930 . - . ID=g270;Name=g270.t1 NODE_3676_length_2976_cov_17.9386 AUGUSTUS mRNA 1 930 . - . ID=g270.t1;Parent=g270;Name=g270.t1 NODE_3676_length_2976_cov_17.9386 AUGUSTUS exon 913 930 . - . ID=g270.t1.exon1;Parent=g270.t1 NODE_3676_length_2976_cov_17.9386 AUGUSTUS CDS 913 930 . - 0 ID=cds.g270.t1;Parent=g270.t1 NODE_3676_length_2976_cov_17.9386 AUGUSTUS exon 1 637 . - . ID=g270.t1.exon2;Parent=g270.t1 NODE_3676_length_2976_cov_17.9386 AUGUSTUS CDS 1 637 . - 0 ID=cds.g270.t1;Parent=g270.t1 #PROT g270.t1 g270 MVRGYEAAHTERDLSRGANNRSVGLSWESLQDRGLYSDGYGAHSSAYSGGGVGSGVGSGNSYFDDRAQRNRQRPSQTVEERIYFLEQRVSELNMSMTNFRADINKMFHNMLQLQSELTSVARSVAHPGAVTPATTNAGARQDFPLTQERPHGHVASTLGPQLPPQAQQQMHTGARHDVPPTQQRPHGQVTATLTPQLPPQAQQQHDASPTQQRPHELT # ORIGINAL: g13478.t1 original gene structure, not modified by PASA NODE_2700_length_5412_cov_41.5786 AUGUSTUS gene 389 5412 . + . ID=g13478;Name=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS mRNA 389 5412 . + . ID=g13478.t1;Parent=g13478;Name=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 389 518 . + . ID=g13478.t1.exon1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 389 518 . + 1 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 707 848 . + . ID=g13478.t1.exon2;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 707 848 . + 0 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 1111 2894 . + . ID=g13478.t1.exon3;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 1111 2894 . + 2 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 3165 3475 . + . ID=g13478.t1.exon4;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 3165 3475 . + 0 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 3617 3672 . + . ID=g13478.t1.exon5;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 3617 3672 . + 1 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 3839 4025 . + . ID=g13478.t1.exon6;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 3839 4025 . + 2 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 4249 4484 . + . ID=g13478.t1.exon7;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 4249 4484 . + 1 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 4699 4875 . + . ID=g13478.t1.exon8;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 4699 4875 . + 2 ID=cds.g13478.t1;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS exon 5232 5412 . + . ID=g13478.t1.exon9;Parent=g13478.t1 NODE_2700_length_5412_cov_41.5786 AUGUSTUS CDS 5232 5412 . + 2 ID=cds.g13478.t1;Parent=g13478.t1 #PROT g13478.t1 g13478 FLAVGAPLFNGPIKTDFTSRESAGRVYVIPSVRDGTVTQTRENTECNYRGFFGSTVSILDSTASSYNVIASAPGCTTDMNAVPVYAPTGTGGDLEVNWGSACSSVRNGTFRANLKVGALSVVTTVPQFRKNLKIGLSTTSSTDIYSNPPDMDLYLEDADPSLSSSLETNNGISFSTTNRVRLLGYDPALDFTSVNVTVSPGVYKATKMTGTANTPYTLCKFCTTSAKTDKCPSDTLTYAGVSLFYGGHFCARNCNLPFRTDEIIVSIVIGLDDNGGSTSTLTITVLTSEGVSLYTSNFIGKNPGDVIVLTHNPSAFWSDAGSVPSSVRIRNAGGNDVQVNYVELSVRSSATVYGFDFGHQWISSNTITVSGATYTLPFSSMNSARVFATEMLVFSIDTVDESNGGTSDNIEVTLYSSAGSQLLQFRVVPAGKGSTRVVAKPLPTRLLAGSTRLGDLKVAATGNDQFSLGGVSVIARSIGQFDYRISGDLSLEYTDFAYKSLTASVPSSSKYTPVDLSGDFVTVSVLTARFSTSATAGNVLVTVTSTSGKTVSVSIGGTAPGMLSSVTVPTSVRWGTDAVARVDISTSSSTDNWSGSFVEVYPRSRAVLYGISIGSREFDSAGYYYTWDSISSNYYSSAYVGGTTRVLPCPGSSEVIEMTGTTNKVYQLIMNGFTAGVGDATYSFDSPCKSSQNGQVSMVTPSSVRSLFGANDMYSFSGVGGGLVASKRNGAAYVGSPNYPSVGTGRVAEVSISPSQTAGAATVLDAFNSRYDYKSPNPPPTSSVYNNGMYGESLVVGEFDGIAANGDEIVVGSPRTTGSTANTAFIGRVEIRVAKGLPTDSTAIVFTDVGEQPGALFGSALCVGDFNGDGLDDLIVGAPNYVPTGAERRAFASFPSDVGRIYVYFSRSAGRLDSSVRTIISGRVPRGRFGFAIGNAGQSGLGGCDKCDDFVVGAPLVDSRGSVYYYTGATVIASTFTPLQEVKGDEVDGLFGYSFGRGDDIDSEGLLDIVVGQPGASGGKGKVVTLVGVVRTDLALSVAPINDVTRFLAGASMGFALTVTYPAVNSP # ORIGINAL: g9899.t1 original gene structure, not modified by PASA NODE_1770_length_9314_cov_37.7095 AUGUSTUS gene 94 1418 . - . ID=g9899;Name=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS mRNA 94 1418 . - . ID=g9899.t1;Parent=g9899;Name=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 1279 1418 . - . ID=g9899.t1.exon1;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 1279 1418 . - 0 ID=cds.g9899.t1;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 1071 1135 . - . ID=g9899.t1.exon2;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 1071 1135 . - 1 ID=cds.g9899.t1;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 761 894 . - . ID=g9899.t1.exon3;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 761 894 . - 2 ID=cds.g9899.t1;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 94 173 . - . ID=g9899.t1.exon4;Parent=g9899.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 94 173 . - 0 ID=cds.g9899.t1;Parent=g9899.t1 #PROT g9899.t1 g9899 MDDVEMVDADVAPVVGPPPPSVMSYFGAQKGKQPEKTSKSDVAGLPWVEKYRPKSLDDLISHKDIVSTIQRFVDENRLPHLLFYGPPGTGKTSTVLAIARRLYGPHYQSMILELNASDDRGINVVREQIKDFASTRTIV # PASA_UPDATE: g9902.t1, single gene model update, valid-1, status:[pasa:asmbl_2578,status:12], valid-1 NODE_1770_length_9314_cov_37.7095 . gene 8239 9031 . - . ID=g9902;Name=g9902.t1 NODE_1770_length_9314_cov_37.7095 . mRNA 8239 9031 . - . ID=g9902.t1;Parent=g9902;Name=g9902.t1 NODE_1770_length_9314_cov_37.7095 . five_prime_UTR 9023 9031 . - . ID=g9902.t1.utr5p1;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . exon 8906 9031 . - . ID=g9902.t1.exon1;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . CDS 8906 9022 . - 0 ID=cds.g9902.t1;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . exon 8673 8769 . - . ID=g9902.t1.exon2;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . CDS 8673 8769 . - 0 ID=cds.g9902.t1;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . exon 8239 8436 . - . ID=g9902.t1.exon3;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . CDS 8336 8436 . - 2 ID=cds.g9902.t1;Parent=g9902.t1 NODE_1770_length_9314_cov_37.7095 . three_prime_UTR 8239 8335 . - . ID=g9902.t1.utr3p1;Parent=g9902.t1 #PROT g9902.t1 g9902 MGTGRFSQKLTDEEWLKFNNYQRAHYNYVEGIATAITLNLAAGLFFPEYAAIAGLAYIIGREVYSFGYRKNGASGRIYGATILDLSLVVMLGLAVTGAVKVLLA* # PASA_UPDATE: g9901.t1, single gene model update, valid-1, status:[pasa:asmbl_2577,status:3], valid-1 NODE_1770_length_9314_cov_37.7095 . gene 5469 7886 . + . ID=g9901;Name=g9901.t1 NODE_1770_length_9314_cov_37.7095 . mRNA 5469 7886 . + . ID=g9901.t1;Parent=g9901;Name=g9901.t1 NODE_1770_length_9314_cov_37.7095 . five_prime_UTR 5469 5623 . + . ID=g9901.t1.utr5p1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . exon 5469 6490 . + . ID=g9901.t1.exon1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . CDS 5624 6490 . + 0 ID=cds.g9901.t1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . exon 6792 7217 . + . ID=g9901.t1.exon2;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . CDS 6792 7217 . + 0 ID=cds.g9901.t1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . exon 7369 7447 . + . ID=g9901.t1.exon3;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . CDS 7369 7447 . + 0 ID=cds.g9901.t1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . exon 7699 7886 . + . ID=g9901.t1.exon4;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . CDS 7699 7715 . + 2 ID=cds.g9901.t1;Parent=g9901.t1 NODE_1770_length_9314_cov_37.7095 . three_prime_UTR 7716 7886 . + . ID=g9901.t1.utr3p1;Parent=g9901.t1 #PROT g9901.t1 g9901 MALSLAVHAPGMHCEPHPHLHPGSAVIDAETYAALESLFPAADEVRFVADCYVDQLGPHRRAAEARLQTFLARAGYSAHASRVFSLMRLFVARNMCEPRDASSDNAGQKRPVQRRSTWTGGLTAAPNVHVTTAAARPLVNPQETASQFLDMVRSRSTHFNSSGIVPPSVASPGHDLPPPPPADEAVASHSRPRLHHVHAHQQQLHASPSYNSAFSSPTKPIAMKHRRNASDGSASTICDSGLGSSVGSQASLHSNESLASIAPSSPVPAPEDDAVSTKFSFDAARANFTHAKGVSSHVRSRSLATAHVAIPECTAVADLPPPPPTMDAHHGTTHMTIVTAAGARGPAPPVAPKPKQTLFSERSPSKVPPPVAPKPKNRSVSNPLPAPPAAQLCSPELLFPPTAMDMLGDLPPPPTDMSTGAKSPLTHSALRAATSNAGKMDTLRRVLTNRRKSVIEHDDDWE* # ORIGINAL: g9900.t1 original gene structure, not modified by PASA NODE_1770_length_9314_cov_37.7095 AUGUSTUS gene 1822 4478 . + . ID=g9900;Name=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS mRNA 1822 4478 . + . ID=g9900.t1;Parent=g9900;Name=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 1822 1890 . + . ID=g9900.t1.exon1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 1822 1890 . + 0 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 2010 2101 . + . ID=g9900.t1.exon2;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 2010 2101 . + 0 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 2532 2641 . + . ID=g9900.t1.exon3;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 2532 2641 . + 1 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 2998 3092 . + . ID=g9900.t1.exon4;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 2998 3092 . + 2 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 3295 3861 . + . ID=g9900.t1.exon5;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 3295 3861 . + 0 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 4039 4141 . + . ID=g9900.t1.exon6;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 4039 4141 . + 0 ID=cds.g9900.t1;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS exon 4405 4478 . + . ID=g9900.t1.exon7;Parent=g9900.t1 NODE_1770_length_9314_cov_37.7095 AUGUSTUS CDS 4405 4478 . + 2 ID=cds.g9900.t1;Parent=g9900.t1 #PROT g9900.t1 g9900 MADQQYILQMQALLEAIEAGRAKDIKYMLEEKGLEVNPPPYKKPDAKDVPAPMFSDSGLQLSVPRASSVSFISPLCWAVFHSRVPTAKYLVDKAGANPNSPSADGRTPLHVAVSKNNAEIIQFLVENFNANIDANNHADETPLYHAIYFGHPNIVDYLIDRGADLSCRTTAGFTLAHMAASKGMDKTLEAIVAKHPELADAQAADGTTPLHLASTVAHVNCVKYLLANGAKVATLNAKGENALTLAAGKSGARNAECVRALLEADVSSASYKLPDGRTALHIAAICGDGAAVQTLIDHGADVSATNTGPAQTALHVAAFNGNKAAVVALVKAGADVNALDDDCLSPMTYADLGGFSEIVTYLKKSGATD* # ORIGINAL: g4983.t1 original gene structure, not modified by PASA NODE_2431_length_6302_cov_35.1609 AUGUSTUS gene 3327 4783 . - . ID=g4983;Name=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS mRNA 3327 4783 . - . ID=g4983.t1;Parent=g4983;Name=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS exon 4709 4783 . - . ID=g4983.t1.exon1;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS CDS 4709 4783 . - 0 ID=cds.g4983.t1;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS exon 4062 4364 . - . ID=g4983.t1.exon2;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS CDS 4062 4364 . - 0 ID=cds.g4983.t1;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS exon 3699 3813 . - . ID=g4983.t1.exon3;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS CDS 3699 3813 . - 0 ID=cds.g4983.t1;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS exon 3327 3568 . - . ID=g4983.t1.exon4;Parent=g4983.t1 NODE_2431_length_6302_cov_35.1609 AUGUSTUS CDS 3327 3568 . - 2 ID=cds.g4983.t1;Parent=g4983.t1 #PROT g4983.t1 g4983 MDVERMSARYYRTGSDVLAQQWLSQSPVLLNALRDGEILVHDTRTPIPSLDSPPGTSFQGGGMRGRGRLQQQQQQQNQGHPHHQNTHLRQGRSHMSTGMKHAMAVTDIKLVTTDDNYVVSTCMDGQMALWDLRASKRVLEYQGHVNECSVLKLSVDQSREYLCAAGNDRRIRVWSVRSGALLRDMFADADPSCPQYPIGLAMKSSPSVPSLSSCSSGVCGVGLGLFAGVDTHLRFWQCREGDLE* # PASA_UPDATE: g4982.t1, single gene model update, valid-1, status:[pasa:asmbl_4303,status:12], valid-1 NODE_2431_length_6302_cov_35.1609 . gene 83 2602 . + . ID=g4982;Name=g4982.t1 NODE_2431_length_6302_cov_35.1609 . mRNA 83 2602 . + . ID=g4982.t1;Parent=g4982;Name=g4982.t1 NODE_2431_length_6302_cov_35.1609 . exon 83 357 . + . ID=g4982.t1.exon1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 83 357 . + 0 ID=cds.g4982.t1;Parent=g4982.t1;5_prime_partial=true NODE_2431_length_6302_cov_35.1609 . exon 664 817 . + . ID=g4982.t1.exon2;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 664 817 . + 1 ID=cds.g4982.t1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . exon 1082 1200 . + . ID=g4982.t1.exon3;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 1082 1200 . + 0 ID=cds.g4982.t1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . exon 1501 1580 . + . ID=g4982.t1.exon4;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 1501 1580 . + 1 ID=cds.g4982.t1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . exon 1916 2075 . + . ID=g4982.t1.exon5;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 1916 2075 . + 2 ID=cds.g4982.t1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . exon 2430 2602 . + . ID=g4982.t1.exon6;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . CDS 2430 2574 . + 1 ID=cds.g4982.t1;Parent=g4982.t1 NODE_2431_length_6302_cov_35.1609 . three_prime_UTR 2575 2602 . + . ID=g4982.t1.utr3p1;Parent=g4982.t1 #PROT g4982.t1 g4982 VVLLDLEVLAEISSQTDNFDAVNLADVIDSVTTGTDDASATKARSLSRRSAGGNAPYFMKFMTNLLLLFSTDRDLLEKRGSFIIRQLCVLLSPVRIYSAVADILLREEDLEFASLMVQNLTLILLTSTELFELRNSLKHLKTPESRSLFCSLYRSFCHNPVSTFSLCLLAQTYKHCSNLIEKFADLEITVGFLVEIDKLVQLLESPIFSYLRLQLLEPERYPYLIKSLYGILMLLPQTAAFSTLRKRLNCVPNLFAFHHEAKLLKDAERGLTEQDELGINFVELLRHFDTVQAQHARAVVEGRRKANTML* # PASA_UPDATE: g2756.t1, single gene model update, valid-1, status:[pasa:asmbl_7636,status:12], valid-1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . gene 21 1093 . - . ID=g2756;Name=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . mRNA 21 1093 . - . ID=g2756.t1;Parent=g2756;Name=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . exon 944 1093 . - . ID=g2756.t1.exon1;Parent=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . CDS 944 1093 . - 0 ID=cds.g2756.t1;Parent=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . exon 315 550 . - . ID=g2756.t1.exon2;Parent=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . CDS 315 550 . - 0 ID=cds.g2756.t1;Parent=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . exon 21 102 . - . ID=g2756.t1.exon3;Parent=g2756.t1 NODE_4805_length_1237_cov_23.2065_potentialcontaminant . CDS 21 102 . - 1 ID=cds.g2756.t1;Parent=g2756.t1;3_prime_partial=true #PROT g2756.t1 g2756 MLTLMHAYLQVRAFEDEDVVHVDGDVNPVRDLEVIHEELRKKDEEYIVKQLDTAKKAMRGNADKAKKTEAEILEKIVNHVVTEKKDARFNMWSAKDIEVLNEHLLITSKPVVYLVNLTEDDYIRKKNKWLPKIIEWVHARDNNDVIIPFSGVFESK # PASA_UPDATE: g860.t1, single gene model update, valid-1, status:[pasa:asmbl_5000,status:12],[pasa:asmbl_5002,status:12], valid-1 NODE_2785_length_5129_cov_39.2327 . gene 86 1974 . + . ID=g860;Name=g860.t1 NODE_2785_length_5129_cov_39.2327 . mRNA 86 1974 . + . ID=g860.t1;Parent=g860;Name=g860.t1 NODE_2785_length_5129_cov_39.2327 . five_prime_UTR 86 87 . + . ID=g860.t1.utr5p1;Parent=g860.t1 NODE_2785_length_5129_cov_39.2327 . exon 86 543 . + . ID=g860.t1.exon1;Parent=g860.t1 NODE_2785_length_5129_cov_39.2327 . CDS 88 543 . + 0 ID=cds.g860.t1;Parent=g860.t1;5_prime_partial=true NODE_2785_length_5129_cov_39.2327 . exon 895 1974 . + . ID=g860.t1.exon2;Parent=g860.t1 NODE_2785_length_5129_cov_39.2327 . CDS 895 1767 . + 0 ID=cds.g860.t1;Parent=g860.t1 NODE_2785_length_5129_cov_39.2327 . three_prime_UTR 1768 1974 . + . ID=g860.t1.utr3p1;Parent=g860.t1 #PROT g860.t1 g860 FASWQEPGLCPSTGKPTGLSRSCNTNYCHNFITATTTLCSAKCGGGRTGGFAFCVEAPAGVRVVDKQMCLDHQTVAPSVNQASCNVQPCAAGQQAVDASIAYWQAVSLSCTVACGTGRKGVRYVCRSPLFPTLEMDDAFCLRVAAKPADVIELCNTMPCEPGTSKLTAAVPSESSGGGSNAGAIAGAVIGVVGAIAIGVACFIYRENIMDAFGNAKSKFGGGSSGGGATASKSHLNVYSTSKASLGRSQELELSKASGSTEELSRMSTPPRPKAPGGGAGAGAAVAAGAGAAGVAGAAGAAGAGAAGGRPTHKAVYDYDPQGSDEIALQAGDSLVVLQTHEDGWCTGRNVRTNKRGLFPANYAQAVTSPAPGAAPAPYKKAQPAVPQQAPRPMGSPAAAPKPMGSPAAAPKPMAAPKPPPSAALPSKPLPAGPPKPPKTGGR* # PASA_UPDATE: g861.t1, single gene model update, valid-1, status:[pasa:asmbl_5001,status:12], valid-1 NODE_2785_length_5129_cov_39.2327 . gene 2296 5012 . - . ID=g861;Name=g861.t1 NODE_2785_length_5129_cov_39.2327 . mRNA 2296 5012 . - . ID=g861.t1;Parent=g861;Name=g861.t1 NODE_2785_length_5129_cov_39.2327 . five_prime_UTR 4955 5012 . - . ID=g861.t1.utr5p1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 4870 5012 . - . ID=g861.t1.exon1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 4870 4954 . - 0 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 4456 4627 . - . ID=g861.t1.exon2;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 4456 4627 . - 2 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 4130 4241 . - . ID=g861.t1.exon3;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 4130 4241 . - 1 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 3817 4002 . - . ID=g861.t1.exon4;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 3817 4002 . - 0 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 3287 3385 . - . ID=g861.t1.exon5;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 3287 3385 . - 0 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 2741 2971 . - . ID=g861.t1.exon6;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 2741 2971 . - 0 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . exon 2296 2504 . - . ID=g861.t1.exon7;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . CDS 2400 2504 . - 0 ID=cds.g861.t1;Parent=g861.t1 NODE_2785_length_5129_cov_39.2327 . three_prime_UTR 2296 2399 . - . ID=g861.t1.utr3p1;Parent=g861.t1 #PROT g861.t1 g861 MSKEIVRDGIAETLPVTLAFFGFYVHDAVALEPVVDHFAALFDSLRLQLGVAYIEQAIGAFVALLTRDTLAAAIRRGPVAIAVVEKFLTLLQLLVQEPGSAFKAFLPGIISLCMDNIYPVIAQQPEAQELHVTFFGVLLQLLLNNWKHFFPASIMDRTRLQQHAGPSSAPREPIQNEAQFCTILQAFAQSFCGADFQVFRANLDALALLNLKCKLFHKEVFREKMCFAFVSTLLNALCARSHEIVTDETLATLYSMAAVDFDSFYRAFVPAYLEQCGDVAPAQRMELLGNLGADSDQPTFTHKVNQFVNDLCYYRKHNRGISSIPVSLT* # ORIGINAL: g4035.t1 original gene structure, not modified by PASA NODE_2149_length_7499_cov_42.5527 AUGUSTUS gene 884 4456 . - . ID=g4035;Name=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS mRNA 884 4456 . - . ID=g4035.t1;Parent=g4035;Name=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 4362 4456 . - . ID=g4035.t1.exon1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 4362 4456 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 4044 4116 . - . ID=g4035.t1.exon2;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 4044 4116 . - 1 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 3697 3868 . - . ID=g4035.t1.exon3;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 3697 3868 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 3219 3385 . - . ID=g4035.t1.exon4;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 3219 3385 . - 2 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 2748 2846 . - . ID=g4035.t1.exon5;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 2748 2846 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 2372 2577 . - . ID=g4035.t1.exon6;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 2372 2577 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 2136 2202 . - . ID=g4035.t1.exon7;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 2136 2202 . - 1 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 1749 1901 . - . ID=g4035.t1.exon8;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 1749 1901 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 1271 1371 . - . ID=g4035.t1.exon9;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 1271 1371 . - 0 ID=cds.g4035.t1;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 884 953 . - . ID=g4035.t1.exon10;Parent=g4035.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 884 953 . - 1 ID=cds.g4035.t1;Parent=g4035.t1 #PROT g4035.t1 g4035 MVHPTLLLGAAAIVVVVWVCMLSVHLLSILYGFYTLNGKASTVKAPLNAPPISIIKPLSGLDGCVRENLVGFFSLDYPRYEILFCIAQHGDPAEDYVRRLIAQHPHVPCRVYVGEEIVGVNPKINNIHRAYSESAHGHVWICDSNLACLPHTLSAMTSRLGPTVGVVHQLPYAINPVAFGGHLERTFFGTQHSRVYIFASLIGTQCVNGMSVLFPKQALEQVGGLVHYGKYLAEDFFMFQHMHDAGYALRLAPLPALQNLGPKTVSQFYSRHIRWTRLRKTMMPIQTPFEPFSECFFIGVLAAWALWTLGVLDGVGMHPALFFVAHVTAWFMMDLLLLIAIEGRTPPQLLWFALAWLFREATSVPVFVWAMSGNEVTWRDRSFELGVGGEVKAKTVAKRQ* # ORIGINAL: g4036.t1 original gene structure, not modified by PASA NODE_2149_length_7499_cov_42.5527 AUGUSTUS gene 5268 7316 . + . ID=g4036;Name=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS mRNA 5268 7316 . + . ID=g4036.t1;Parent=g4036;Name=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 5268 5945 . + . ID=g4036.t1.exon1;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 5268 5945 . + 0 ID=cds.g4036.t1;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 6173 6330 . + . ID=g4036.t1.exon2;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 6173 6330 . + 0 ID=cds.g4036.t1;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 6595 6856 . + . ID=g4036.t1.exon3;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 6595 6856 . + 1 ID=cds.g4036.t1;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS exon 7107 7316 . + . ID=g4036.t1.exon4;Parent=g4036.t1 NODE_2149_length_7499_cov_42.5527 AUGUSTUS CDS 7107 7316 . + 0 ID=cds.g4036.t1;Parent=g4036.t1 #PROT g4036.t1 g4036 MDSLDLTVHAVLPNGDHKLVGTVAWPATDSSSDYAAAVLSAVARESGLSRDSFVDYGIFSQSLCDWVQFGNRSARIGISPGSVIVYRCRQRIVRVHMLNDSIRAVVVNEALPVGVVIASVCEQLGISHPEEMGLVAARAVDSGRPLLGAPMPPAAASASKEHGHAVSVSAVFLERTRLQGAIVMRNTPRPVRFRANEPWLNTKQTLRSQGVDDAHDVVLKFRFFGKVRIGRREHMRLVLLFAQARRAFLNGEAACSETDAGQLAALLFQASYGDFDEDRHTWRFLDEVWETIFPFHVKHKMAVAKRLRRDHRALAGMSEMDARLNFTKLWSVLDLYGVDFFTCTTDGEASACDVVFYSSHPMLSSYPPIAAAIGVGHEKIIFATADVVPEAVSNPSQAPQAPRNGPQQWNLEAAQKWSAEGGAAEKASVCVVACA* # ORIGINAL: g9758.t1 original gene structure, not modified by PASA NODE_2340_length_6651_cov_42.909 AUGUSTUS gene 4324 5875 . + . ID=g9758;Name=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS mRNA 4324 5875 . + . ID=g9758.t1;Parent=g9758;Name=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 4324 4463 . + . ID=g9758.t1.exon1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 4324 4463 . + 0 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 4712 4783 . + . ID=g9758.t1.exon2;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 4712 4783 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 4868 4939 . + . ID=g9758.t1.exon3;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 4868 4939 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 5026 5097 . + . ID=g9758.t1.exon4;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 5026 5097 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 5186 5257 . + . ID=g9758.t1.exon5;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 5186 5257 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 5488 5559 . + . ID=g9758.t1.exon6;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 5488 5559 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 5643 5714 . + . ID=g9758.t1.exon7;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 5643 5714 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 5800 5875 . + . ID=g9758.t1.exon8;Parent=g9758.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 5800 5875 . + 1 ID=cds.g9758.t1;Parent=g9758.t1 #PROT g9758.t1 g9758 MLPKPELILLLHSLALSIHLTCSVLGVNQIATLPSGIFDKLTALTYLYLYANQIATLPSGIFDKLTALTYLYLYSNQIATLPSGIFDKLTALSELQLGSNQIATLPIGIFDKLTALSQLALQTNHIGTLPSGIFDKLTALAVIWLHMNQIATLPSGIFDKLTLLTIAQLHANQIATLPSGIFDKLTALTELNLGSNQIATLPSGVFDKLTALTSL* # ORIGINAL: g9757.t1 original gene structure, not modified by PASA NODE_2340_length_6651_cov_42.909 AUGUSTUS gene 163 3190 . + . ID=g9757;Name=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS mRNA 163 3190 . + . ID=g9757.t1;Parent=g9757;Name=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 163 230 . + . ID=g9757.t1.exon1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 163 230 . + 2 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 589 726 . + . ID=g9757.t1.exon2;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 589 726 . + 0 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 819 1503 . + . ID=g9757.t1.exon3;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 819 1503 . + 0 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 1629 1829 . + . ID=g9757.t1.exon4;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 1629 1829 . + 2 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 2179 2227 . + . ID=g9757.t1.exon5;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 2179 2227 . + 2 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 2332 2517 . + . ID=g9757.t1.exon6;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 2332 2517 . + 1 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 2589 2728 . + . ID=g9757.t1.exon7;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 2589 2728 . + 1 ID=cds.g9757.t1;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS exon 2835 3190 . + . ID=g9757.t1.exon8;Parent=g9757.t1 NODE_2340_length_6651_cov_42.909 AUGUSTUS CDS 2835 3190 . + 2 ID=cds.g9757.t1;Parent=g9757.t1 #PROT g9757.t1 g9757 ATDSTAPVNARRGRAFTARRAHVNATVELSEYGIGIRLRWYHDDVGPRAWNSWRYEISRTGCFSKMYQVGDVLTFLDTDVVINQGYSYYVRAYNGRNMSAEEEALAGIRNLQKTERPSPPYNVSSTPTLNPDNQQAMIKITWKEDISSGPIIKTFIFRDGLLVLEGPMDTEYKDRDVVFGKTYVYEITSVNHIGNSTATRFSETASIGPSDAGTPTAGASSSGSVAGPVAGGVVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVKSLPTADEIRSARSAFMAEIDLMRTIPNHANIIELIDIARGMDHLAKCEIVHRDLAARNCMVVAGPRAPNTIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSISTYLSQNKRMEPPKDCPKLAYAAMEACWRKHAETRPQFTQLVLQLRRGMAVLCGTEGGGGNLGVDDVDSVVALGQSNPFSNAVPEGAYAETVGEEESLYTLQNPIFRKDSNSLTGHSSA* # ORIGINAL: g2701.t1 original gene structure, not modified by PASA NODE_5848_length_698_cov_74.7047_potentialcontaminant AUGUSTUS gene 114 698 . - . ID=g2701;Name=g2701.t1 NODE_5848_length_698_cov_74.7047_potentialcontaminant AUGUSTUS mRNA 114 698 . - . ID=g2701.t1;Parent=g2701;Name=g2701.t1 NODE_5848_length_698_cov_74.7047_potentialcontaminant AUGUSTUS exon 114 698 . - . ID=g2701.t1.exon1;Parent=g2701.t1 NODE_5848_length_698_cov_74.7047_potentialcontaminant AUGUSTUS CDS 114 698 . - 0 ID=cds.g2701.t1;Parent=g2701.t1 #PROT g2701.t1 g2701 VAIGLGKSPDNIVFANTAKRPSDILFAKEHGVNKFTADSPDECHKLLDLYPTAKIILRLATSDKGAQFTKFAHKFGICGEVKLHFIIDSILSRDPSCLIGFSFHVGCGQTRIDAYREALDKVVEACEYVKTEHPSSFEQIVYVDIGGGFAGVDEPGSLTLPDIHGVIESYVSKLPSTVKFIAEPGRYFCAEAVTL # ORIGINAL: g6160.t1 original gene structure, not modified by PASA NODE_1942_length_8416_cov_37.1448 AUGUSTUS gene 3412 8059 . + . ID=g6160;Name=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS mRNA 3412 8059 . + . ID=g6160.t1;Parent=g6160;Name=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 3412 3458 . + . ID=g6160.t1.exon1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 3412 3458 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 3779 4138 . + . ID=g6160.t1.exon2;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 3779 4138 . + 1 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 4513 4639 . + . ID=g6160.t1.exon3;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 4513 4639 . + 1 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 5156 5401 . + . ID=g6160.t1.exon4;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 5156 5401 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 5708 5752 . + . ID=g6160.t1.exon5;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 5708 5752 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 6375 6527 . + . ID=g6160.t1.exon6;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 6375 6527 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 7033 7149 . + . ID=g6160.t1.exon7;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 7033 7149 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 7431 7532 . + . ID=g6160.t1.exon8;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 7431 7532 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS exon 7802 8059 . + . ID=g6160.t1.exon9;Parent=g6160.t1 NODE_1942_length_8416_cov_37.1448 AUGUSTUS CDS 7802 8059 . + 0 ID=cds.g6160.t1;Parent=g6160.t1 #PROT g6160.t1 g6160 MADEAVPMDVDPIEPTSDVAPIIVTALVGEAVDAENATNVEVSKQSNDAPVEKVADAAAESQSQPSDAKVRTPTKDSRHSKGNDAKRDTRQDVKDVKDGKGTKDGREKEKEKRSSSSSSASAAVDSKGKPVTKSTSSRSAALDFVYRPSYRSSFPDVPFDAKSIAYPFDSERFVPYTMTSLEKTYKHDILISPEYGVPVDMVDPDVFARRHDDKLDPADKALIVDEEADSGANFAKKMNFGNVTWLRNTEYVSSEFGRQAKEAPPPKQKKEWAMLSRETQIKAIVASFEASRLPITAHPTKEKVTAVEVLPFFPDTLLTGSHVFSVHFDSEPDRIKKLPGCTLEDMEAIQKERLNMGVFLDAEDQGEVGGSSVSYYLPKPEVVASLKRKREEEDVTEEKERECMHVRDYAFKQRTTSGEADLVFVVAVRPGDGAVEGAGNSLKANATTGGAFFRQTDNHFELTKRRRPGSAPKKNEKLIVHFVE* # PASA_UPDATE: g6159.t1, single gene model update, valid-1, status:[pasa:asmbl_3075,status:12], valid-1 NODE_1942_length_8416_cov_37.1448 . gene 56 2601 . - . ID=g6159;Name=g6159.t1 NODE_1942_length_8416_cov_37.1448 . mRNA 56 2601 . - . ID=g6159.t1;Parent=g6159;Name=g6159.t1 NODE_1942_length_8416_cov_37.1448 . exon 1520 2601 . - . ID=g6159.t1.exon1;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . CDS 1520 2601 . - 0 ID=cds.g6159.t1;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . exon 905 1083 . - . ID=g6159.t1.exon2;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . CDS 905 1083 . - 1 ID=cds.g6159.t1;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . exon 56 763 . - . ID=g6159.t1.exon3;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . CDS 414 763 . - 2 ID=cds.g6159.t1;Parent=g6159.t1 NODE_1942_length_8416_cov_37.1448 . three_prime_UTR 56 413 . - . ID=g6159.t1.utr3p1;Parent=g6159.t1 #PROT g6159.t1 g6159 MEHDRVHNGGDGPSGSSLHQPSSSDYEIDDVNVSVACVADDVDYPMGPLKKRESYGSATEAFAELDSVFKTEVDVSVVSAAGEDGVDRAKHNKSPSNRSTRTRYAEGRDGREDEDRCESVASEDSTEALQRALKREIVQKFKREEDKKSEVFRHMRRNSSAQLFIALLSIALMVAELEIAWTFVADKEHAPRTLNILQGVQTIVSLGMVLALYRYYQYACVLNILRNNYPPWMQVHRSPLALPFACEAFVCALHLPPFGDTVVPRELQLLVLLRLYVIVRFVKEHMSMASSKSTRFLASFTKTDMTTAFLIKAFFREHPLIVIPFFYMSHVLVLGYAIFVIERTPATGSILLSDTCWMIIVTMTTVGFGDVVPQTQVGRVLVSYSAVSGIFSTALLISYINDSMELSLGESRITAFLRQQELIGSRKHLAASAIQAAWRLNRRMRQVRRMEQQRNSGHVQFSPGVARSASREAWGGGESIQHVTFGAGTAAGDAEVQGAVFKGFFRFPGEKTLQNIVLPNSTTPTEVSAGYACMVS* # PASA_UPDATE: g6342.t1, single gene model update, valid-1, status:[pasa:asmbl_6326,status:12], valid-1 NODE_3627_length_3089_cov_41.3009 . gene 401 2938 . + . ID=g6342;Name=g6342.t1 NODE_3627_length_3089_cov_41.3009 . mRNA 401 2938 . + . ID=g6342.t1;Parent=g6342;Name=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 401 442 . + . ID=g6342.t1.exon1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 401 442 . + 0 ID=cds.g6342.t1;Parent=g6342.t1;5_prime_partial=true NODE_3627_length_3089_cov_41.3009 . exon 770 909 . + . ID=g6342.t1.exon2;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 770 909 . + 0 ID=cds.g6342.t1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 1191 1326 . + . ID=g6342.t1.exon3;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 1191 1326 . + 1 ID=cds.g6342.t1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 1635 1787 . + . ID=g6342.t1.exon4;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 1635 1787 . + 0 ID=cds.g6342.t1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 2236 2337 . + . ID=g6342.t1.exon5;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 2236 2337 . + 0 ID=cds.g6342.t1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 2588 2758 . + . ID=g6342.t1.exon6;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 2588 2758 . + 0 ID=cds.g6342.t1;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . exon 2903 2938 . + . ID=g6342.t1.exon7;Parent=g6342.t1 NODE_3627_length_3089_cov_41.3009 . CDS 2903 2938 . + 0 ID=cds.g6342.t1;Parent=g6342.t1 #PROT g6342.t1 g6342 IRRCVAFLSQFAGTGSTNSELLKWRIEVDAAMISLTGRVLPAPPILMGNQDEYNSLPLANWRLNFKPTKKRDGANMFTKEVAPLDKAIIRRLLVLQTPASRGVTGDLLAAIRAKPYLCIPDTRPVGLTEALTISPGSDVIAVETVTPSSRNYIDVLTRIGEWERRCGTTGAFDFVIVIIPKGKEIYRDVKKYLCTERPRGLPIPSQFCTQEKIRTNRDVATIIDKLTWQMLAKLGGCVWYTEPLDESKLKCCISFFHGY* # ORIGINAL: g11450.t1 original gene structure, not modified by PASA NODE_2528_length_5998_cov_89.235 AUGUSTUS gene 4180 4872 . - . ID=g11450;Name=g11450.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS mRNA 4180 4872 . - . ID=g11450.t1;Parent=g11450;Name=g11450.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS exon 4829 4872 . - . ID=g11450.t1.exon1;Parent=g11450.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS CDS 4829 4872 . - 0 ID=cds.g11450.t1;Parent=g11450.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS exon 4180 4738 . - . ID=g11450.t1.exon2;Parent=g11450.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS CDS 4180 4738 . - 1 ID=cds.g11450.t1;Parent=g11450.t1 #PROT g11450.t1 g11450 MTVEDDLVNPESVRNTVDVDKLARELFDRCTCAQAGEAQEGDKELAVPLRPRRSRQRGRWNRFTSTLSLEREEGGHKYVLGAQDVATKFLWLVPHKNKTAGDVAIALEDYVLPWGTPELIVHDPGSESMGSAFKRFCDQYEIKSQTTTVGKLSSSGLIERVFRTVLDWLRKASCCRESELGCLTRGSEQTSASSGAQLQP* # ORIGINAL: g11449.t1 original gene structure, not modified by PASA NODE_2528_length_5998_cov_89.235 AUGUSTUS gene 105 1218 . - . ID=g11449;Name=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS mRNA 105 1218 . - . ID=g11449.t1;Parent=g11449;Name=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS exon 1051 1218 . - . ID=g11449.t1.exon1;Parent=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS CDS 1051 1218 . - 0 ID=cds.g11449.t1;Parent=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS exon 745 913 . - . ID=g11449.t1.exon2;Parent=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS CDS 745 913 . - 0 ID=cds.g11449.t1;Parent=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS exon 105 550 . - . ID=g11449.t1.exon3;Parent=g11449.t1 NODE_2528_length_5998_cov_89.235 AUGUSTUS CDS 105 550 . - 2 ID=cds.g11449.t1;Parent=g11449.t1 #PROT g11449.t1 g11449 MWSGFRITESLQKRVSKFVLKRTIGQFLENELELDQLSVQLQDGIVSLEKLKLNAQVLNDMITDLPVVINAGFIGCINASIPWKDVWRGSCSLEFRNLRLSVMPKSGVAKNAVDLLDSMTSSGLRASMDLADQILREELEETRGSYSSSQSRSRQANEMPLPPTPSGGMEGLEVLAGLIENLLSKIKATFVDIEFRLEHKSKWLGRPVALIVRIGRVEYCDQTPGRDDDTPSQPVPQPPSQQQQGFPEWKPSVAVKDIRIQ # ORIGINAL: g12395.t1 original gene structure, not modified by PASA NODE_2363_length_6573_cov_43.147 AUGUSTUS gene 164 1191 . - . ID=g12395;Name=g12395.t1 NODE_2363_length_6573_cov_43.147 AUGUSTUS mRNA 164 1191 . - . ID=g12395.t1;Parent=g12395;Name=g12395.t1 NODE_2363_length_6573_cov_43.147 AUGUSTUS exon 780 1191 . - . ID=g12395.t1.exon1;Parent=g12395.t1 NODE_2363_length_6573_cov_43.147 AUGUSTUS CDS 780 1191 . - 0 ID=cds.g12395.t1;Parent=g12395.t1 NODE_2363_length_6573_cov_43.147 AUGUSTUS exon 164 415 . - . ID=g12395.t1.exon2;Parent=g12395.t1 NODE_2363_length_6573_cov_43.147 AUGUSTUS CDS 164 415 . - 2 ID=cds.g12395.t1;Parent=g12395.t1 #PROT g12395.t1 g12395 MSSVSAQPQFVGSPDSPGPSSLSPGTLAQCNPETRILLTPSHDWGWESEFVYKGIKVDLALTREAITWHKRMVPRDSGTDARSSSDSGAGSSGCSMCGCRKKSSKLQSPEARRSKDAGCCACLGRARPRSPSFTSVSPPKSVALADVIGVDLDYLRGGSRGRESCSGTPDAAQEEGGCFVLHYAKKAKGGSRLIAKCARFVTPDCRAAHQWATKVQDLLKD # ORIGINAL: g1977.t1 original gene structure, not modified by PASA NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS gene 6345 8596 . + . ID=g1977;Name=g1977.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS mRNA 6345 8596 . + . ID=g1977.t1;Parent=g1977;Name=g1977.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS exon 6345 6820 . + . ID=g1977.t1.exon1;Parent=g1977.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS CDS 6345 6820 . + 0 ID=cds.g1977.t1;Parent=g1977.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS exon 6979 8596 . + . ID=g1977.t1.exon2;Parent=g1977.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant AUGUSTUS CDS 6979 8596 . + 1 ID=cds.g1977.t1;Parent=g1977.t1 #PROT g1977.t1 g1977 MTALADSHVHSVAREQRSNSPCSPAEIWSDYGVSGERSLCDLPDEVILEVLSYLPAVPLFRIECCSKRLSGILRSSTAQRHVWARVLACEFPLAESSQGGLSAECKGGEDCAILDEEDVRAVVRLRCIQRSNVRRLCASNAHVFRAHRNLITAVCVLVRYPGMTSSRRRHRTASSSVSSNNGEVGDCDDVDGDRPLTTLAQTRFIATASADCSVRVWDVLLQDCCVCILQGHANSVCSLLWCPLSALLVTGGWDRKAVWWDLAGILYTSKRTHRASSRNGNGTREYPVESAIPLFQAHDYATLPGHTRAVMSLASSADCSVVVGGGGDGLLAAWPLRPSARRLARDYARLRAADPDQGDGQHVHAAPASSPAPPPVACISASSQAILAVAMREQSNVTTGNVRSFIVVAVDSGGRGAFFSLSLRSSKTSDECPAPSLEHLGRFGLFPHRVRSVSVAGVALFFGVAETDGRVMLGGVDWPEKCRHAIDAEASIGSREWGGRGGGGSLLAVGASSGHVSAVAEPIGVSMLDGRFPGCDRLLPRVWYMSCVRTAGDTVVESRALGGAAVGAGSSPPLWGSVHVPFQASCATSGQDLVVVGGADGRIAIASFSARRGKVAVASAGTREQHSHSSVVAAAGGLFRLAAARVVRTSSRTRAVFVGLCVSLVVWNAVSALITIASAPATLVVALLSAGLVVCVW* # PASA_UPDATE: g1978.t1, single gene model update, valid-1, status:[pasa:asmbl_253,status:12], valid-1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . gene 8743 14069 . - . ID=g1978;Name=g1978.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . mRNA 8743 14069 . - . ID=g1978.t1;Parent=g1978;Name=g1978.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . exon 8743 14069 . - . ID=g1978.t1.exon1;Parent=g1978.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . CDS 8919 14069 . - 0 ID=cds.g1978.t1;Parent=g1978.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . three_prime_UTR 8743 8918 . - . ID=g1978.t1.utr3p1;Parent=g1978.t1 #PROT g1978.t1 g1978 MSAAPIYGVVFDCMGAERAFVVTGGNVVISSVVVRNGRAPVGGAIAVWRGNLTLSNCTFDANVATATGPVAGAAGFGGGALYAEASAVAIISSTFTNNTALNGGGALVVLDATAAACKQPHIFGSSFSGNSAVDSGGAVAVTGLVDFFSLDSAAAAASASIADCQARTLVVLTSFYNNTAAGGFGGAASFDFAGPSPVQLRITNSSFSSNAAGDDGGGGAVCAKFAGSGPSTTASDSEPLVYVAWNSFALNSIVPSDPGDIALGSGGAVYIAYGQAVRGGVSDVFSENVFSGNFAFMSGGALAIDHLGSVTAMSHVIRHNSFHGNAASSASFGSIFGGAVSFGYLNSASGVQHVADYNTFSGNWVYGYAPFGGAIGVFYARTAGGSTADCTHALSSNTFDGNSAVSTAKDVDGGAVSVTVVQVSRNVTVSLSLNTLSTNHVNCTPVDAECSASGGAVSLQAADCSMCGIVTTGDSFLGNWVQGSPVDDGESFGAAMSIDLDAGTGISLSVAGSSFSQNAALNASDAHGGAIGIRCRGFCEGSSATLINATFAGNAVYGIVDAAGGALFSDHVIGSMGSTHRIERCTFKNNNAVTTATGGATGGAVYISHAGGTNSNVMVYTTSFVGNYVLSVADGGGGALAWVSGDLWGPRNSALDVEGSTFTDNYVGYLPSALARLRVRGATRTAGKGGALLISYARAESCTHTVIGNTFSGNHVTDHLVAQGGAISFWKNGDAGLMTSQIISNVMSHNSLFGCDVCLGGAVSSYTGKNATNSLTNVTDNTFAGNTLTSMNPVNPLDQRSRHRCAGGAISLLNDGSCQGGRISMLRNGFSENGIYCGAFSYGGAVSILHANGTQNNKISFTSNGFSSNFAATNQSAYGGALSIVFGSAGPAYSCGSNAIGFRANTFDHNSLNKLAVNATGYSYAALGGAVCVIGCPDAMDPSTVGRGTFVRWVYKTTTTSIGDSFTSNRASCVGCSGGGFHGSNGNTSFVGAFFSMNAGGSFGGAINTDGDSAGLSIANSVVSFNSAERGGRELYAGGGGDVGVRNTTFVADEPCQSFFEMAYGGRLSIDGSSALSCPAGSQLTASALDPYITADPLGVYVNLVTSSFYGCLACPRNYYGLRGGFSNGTSMHPSTCLECPVGADCPDGGSDVRSLAGFWCGAVMGADSDSLQCYACPDGYCCAGDTCAWNTPCVGNRTGVLCGACKDGYGETLGSLECEAEDSCSGGYWVVVIVSVVVSLVIIGLLIGLPLASTALWKSFWYFVQMLPLVLDTVALRFAGGHLWAIFTFEPNIGGYTVCPYAGMSGVARIAMGYTVPAVAMVVVALLWTVHFLLVRRGLREDFDSYIDFDSLVKFDQRVYRAMESSDNDGFASFPQPRVTYLNTKRSGRFARAMVGIALLSYTRISITTFNLVSCVSAEGSSRLFLAGDVTCGGHWWQAMAYFVIGAVLIPVPLALAYLRYWAHRPSARPTWSTRWAVLVFEAPFVPTRWWWEAVILYRRLALAAMRVFISDPYWRSLALALGCLAAFGLNVYAAPFKNGNAQRVENSFLLGLAIIALLACRDGAYASFGVPGGGRIGESASRSVADVEIALAIVPMVITLIVVFGRLFWACTWVREVNWPLARFRKKFGDGLGDEDDGGSPNPSGVPDDYDSDGSGNTTPFHRTGSFLDAPTISTYSAINSRNNNNSSNTNKMGTATTANPNSDGERVPLVKST* # PASA_UPDATE: g1976.t1, single gene model update, valid-1, status:[pasa:asmbl_252,status:12], valid-1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . gene 613 5654 . - . ID=g1976;Name=g1976.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . mRNA 613 5654 . - . ID=g1976.t1;Parent=g1976;Name=g1976.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . exon 613 5654 . - . ID=g1976.t1.exon1;Parent=g1976.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . CDS 681 5654 . - 0 ID=cds.g1976.t1;Parent=g1976.t1 NODE_1069_length_14247_cov_52.8021_potentialcontaminant . three_prime_UTR 613 680 . - . ID=g1976.t1.utr3p1;Parent=g1976.t1 #PROT g1976.t1 g1976 MSGGDAYAPPSTLPSALQDSPAWPDPAPLYGLALPTVDDISRMNARCVGGLFNCRCEDDVVDVIALARRTGRRVCVRGTQHSMGGHSISEGALVIDTSLLSRVSFDPHTAHVTAETGATWIDVIRVLNVYGRSPRTMQSYASFSVGGTLAVNAHGITTDHPIAESVVSFRIITADGRVVTCSRDAESEQARDLFRCAIGGYGMFGVITQATFKTDGNVNLIVHSLQLASSEFPSVYDSALAADDVVIKLARLDLTNLDNITLFLFRRAGEEGARTVSSLPHMPREMTGLRRLMFKWLAPTFKELRFAIENRLGVALDWNDADEQQRNVLMFESAEPLARLFEPLLRTDDTFILQEYFVPREHFLAWVWQAKPIVASIDSEPHKRCTLLNMTVRFVRQDMDTALPYARHPDGMYAFVLYYRIPRSREGDAALESFHRAFVAITLSLGGTFYLPYRHHYSDADLRAAYPDIETFWAAKAAFDPDCLFDSLWRQRYGPPQMRETPSHALLVRDVRDVCASSSFYTDSDNDGAAAGSNTVATATVSERRTDSFRQLLRHVDSWREFCDRFLVSIFNVEDPLALSRAVAKCIWDPRNSDDSEIYEALQTELARNGSGPLRMLSTGWRQIAQLRDQKAEFLRETLSILGHLGKVGHVHDYVSIGDHGKMADELRRGLGMRGRCVCVHDVMSDDIPAVIEKGTLTPPDDFVRIDYDHVDGGLPNIPSESADLVTINQGLHHLPQGQLAPFLRDVRRILRPGGLFIVREHDWDPERHPRLLPMLDVAHMVFNAVTGVSPRQERRERRAFRSVLEWRTIVESAGLCDSRLYEMQAGDPTWDEMMCFFKPPLWPCESPADIPAHPTAHHAPRALAYAAPIALPRVAAVMNDAPGIVLAGTRAAVAAILSALPSFTVQLKATLASVAPAQAYLLHQPVENMAETVSTLLLRVQAHLASVELREDVPDLIPSEIFLAIHALHRKASAGNASAMELAACALLKSLEGMITLEQPATRHAGAGEGAKLQSPAGDSRACMHTEYGSDGNDESAQGHPTAADVEAVILTLLETIPELNDESVVGSLGLPPLAQRYVHTVLQGTPQGVRAVKIASLLADKLDSHAWASLKNALERIDTFSASARLPTLSNIRTEGNPWRDAAIAILGSAKLPVSQAATWQAWFVGLSDFVTLWRGAQEERVRLRVRCAGETGIAGDADADGDGQQGGAPFRTIAPAALDELRSALDDLDDGRISYVKMQEGRFYDVPDVVEVIEAKYGYRSYTADYADVTEAMQRHYLHDGRLHLKGRNLTSELSGEGLLPWRAIDAVRCTLTGNVRKLKIRYRRTWGKGTGGSGSVRREEIARVCRLLSTAGLTRPLHGGGQEGHWTWFKLSEWMQVEITQALANGMEQTPWYRFPFTRFLALYFGVLWKEVRVVADKFGWQKALASKAFGVDLVPGIAMAGIFMQLQLLALPVLSVGGEAYDDSALVEELVVTSGAPSHDPAIDWNGIYPRIRGATRVVDDLFVVTVPTFKPLTEAVVAIARALPHARLLEISHRKEVQVKLRYLDNANDADADDADSDDELRETPIELEGGAVCDASDPVARRLLMNALGGEWPVGCEHKFSFQFPTFGAAGSLGNYAVLCVQAEHLLETVRIVDAHSDRIEIAQIYDFFN* # ORIGINAL: g12634.t1 original gene structure, not modified by PASA NODE_3015_length_4531_cov_36.2985 AUGUSTUS gene 2167 4200 . - . ID=g12634;Name=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS mRNA 2167 4200 . - . ID=g12634.t1;Parent=g12634;Name=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 4089 4200 . - . ID=g12634.t1.exon1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 4089 4200 . - 0 ID=cds.g12634.t1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 3790 3922 . - . ID=g12634.t1.exon2;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 3790 3922 . - 2 ID=cds.g12634.t1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 3613 3671 . - . ID=g12634.t1.exon3;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 3613 3671 . - 1 ID=cds.g12634.t1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 3187 3269 . - . ID=g12634.t1.exon4;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 3187 3269 . - 2 ID=cds.g12634.t1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 2654 2759 . - . ID=g12634.t1.exon5;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 2654 2759 . - 0 ID=cds.g12634.t1;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 2167 2273 . - . ID=g12634.t1.exon6;Parent=g12634.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 2167 2273 . - 2 ID=cds.g12634.t1;Parent=g12634.t1 #PROT g12634.t1 g12634 MAFSATFQPHMTEQLKLFMRPNPTFLSAEADGAVSLEGIGQYYAVVNPPTSDVFEAKVDALLDIFARLPFHQCIVFSNNRSSGEDLANVLTANGWPSSFISGDQDQRDRLVAIEMIRGFRIRVLVSTDVTARGLDLERLNLIVNLDLPKSAETYMHRIGRSGRFGTYGIAISLITDEEVPKLESIRVAYSLRLSILPGM* # ORIGINAL: g12633.t1 original gene structure, not modified by PASA NODE_3015_length_4531_cov_36.2985 AUGUSTUS gene 70 226 . + . ID=g12633;Name=g12633.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS mRNA 70 226 . + . ID=g12633.t1;Parent=g12633;Name=g12633.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS exon 70 226 . + . ID=g12633.t1.exon1;Parent=g12633.t1 NODE_3015_length_4531_cov_36.2985 AUGUSTUS CDS 70 226 . + 1 ID=cds.g12633.t1;Parent=g12633.t1 #PROT g12633.t1 g12633 GGRQRACSVCRSRRRRRVGFLQRLCRRTAGSILVCASQVVRCRAVCIQPVLL # ORIGINAL: g1915.t1 original gene structure, not modified by PASA NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS gene 2 1453 . + . ID=g1915;Name=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS mRNA 2 1453 . + . ID=g1915.t1;Parent=g1915;Name=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS exon 2 104 . + . ID=g1915.t1.exon1;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS CDS 2 104 . + 1 ID=cds.g1915.t1;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS exon 296 370 . + . ID=g1915.t1.exon2;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS CDS 296 370 . + 0 ID=cds.g1915.t1;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS exon 706 858 . + . ID=g1915.t1.exon3;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS CDS 706 858 . + 0 ID=cds.g1915.t1;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS exon 1175 1453 . + . ID=g1915.t1.exon4;Parent=g1915.t1 NODE_3447_length_3447_cov_39.4345_potentialcontaminant AUGUSTUS CDS 1175 1453 . + 0 ID=cds.g1915.t1;Parent=g1915.t1 #PROT g1915.t1 g1915 LLSAHGASRRALINTLEEEKKRVETLEANITTYETRIEEQNRRVQRINDTLELHRKDLQALVREFSGSTSGMIELREAISKLQLESEYKFQADQTHMDQLRFILEDHTERMTVVEQRLTASEQRTFTGTAAWMLSYVVGVTGAVTSIVTQAALEARILVGAAPRQPKALSMADVDAGSQNEKESSSSSSQSNLSSSTSARLR* # ORIGINAL: g2125.t1 original gene structure, not modified by PASA NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS gene 148 1056 . - . ID=g2125;Name=g2125.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS mRNA 148 1056 . - . ID=g2125.t1;Parent=g2125;Name=g2125.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS exon 148 1056 . - . ID=g2125.t1.exon1;Parent=g2125.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS CDS 148 1056 . - 0 ID=cds.g2125.t1;Parent=g2125.t1 #PROT g2125.t1 g2125 MKIEQADDDTWRISAGRTTRDGKQRLYMAIMRRPAGPWQCSPAVRDNAYALFSGDFSLYEAARIVFPRESARWMGVHKFSQNLKDMLLPGTHDSAATDLTFDACMQRSVPKLVLNTLARWNFCGIGDFVRRWGVCQRLSIGEQLRLGVRYLELCVGRRTSLDYYLVHEFVCGRLSAALADIRQFVQDYPSEVVIVSLITKTEIDGDAFVEFVRDNLGDELLLPTDGPTQIDKIVESAARIVLYFDVAVTTSANQRVYRGGEQIMSRIGAFKEIANPQEKYERIMRESDSLIEQKEAGQAALYQ # ORIGINAL: g2126.t1 original gene structure, not modified by PASA NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS gene 1444 2583 . + . ID=g2126;Name=g2126.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS mRNA 1444 2583 . + . ID=g2126.t1;Parent=g2126;Name=g2126.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS exon 1444 2583 . + . ID=g2126.t1.exon1;Parent=g2126.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS CDS 1444 2583 . + 0 ID=cds.g2126.t1;Parent=g2126.t1 #PROT g2126.t1 g2126 MAQENLKRLHDVPFGEDVQFIIGLDRNIIGGHKVLFALQSEYFKTVFYSNAFSDTGGAKVELPDVSPELFRLVKLYVYKHDTDEIENETKNSSELQELLLLADRFCMDSFVDWLSSMIRDYVCNDTVVSTLEKFRIIPSAVRACCKWIAKSGGNDLNGFARLSHDEFDQVVKWYEGSDMDVVKLIARWSKVPDGAETQERVKQMKHLVDLTNLTILELTEMPSLGWTSEECLAAVAKVATNTEGVAIRLLTNNNKFIAVYRIPHKLISKPICKEGRSYPQFTFKNSRWALYLKLTDGDLGLYLRKQHDDYVPTVTYTATLKSATICNRIQVIDGRKYDNGEQSSWGTSEFVKFDQLDKHVLPGDLFQFVIKGKLLDDSL* # ORIGINAL: g2127.t1 original gene structure, not modified by PASA NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS gene 11110 11448 . - . ID=g2127;Name=g2127.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS mRNA 11110 11448 . - . ID=g2127.t1;Parent=g2127;Name=g2127.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS exon 11110 11448 . - . ID=g2127.t1.exon1;Parent=g2127.t1 NODE_1418_length_11467_cov_21.9456_potentialcontaminant AUGUSTUS CDS 11110 11448 . - 0 ID=cds.g2127.t1;Parent=g2127.t1 #PROT g2127.t1 g2127 MRPVQPMPAAQQPQTMLKPVNLTGKQTRPNAPAPAAVPPAFPAQFPTSYPTVPSAPLPASAFQFPPGASTQPFPSVMSQSMPILSKSRPPTAEDLAIPTLPAYTSGVSYGAF* # ORIGINAL: g9859.t1 original gene structure, not modified by PASA NODE_1994_length_8179_cov_39.5676 AUGUSTUS gene 2043 3182 . + . ID=g9859;Name=g9859.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS mRNA 2043 3182 . + . ID=g9859.t1;Parent=g9859;Name=g9859.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 2043 3182 . + . ID=g9859.t1.exon1;Parent=g9859.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 2043 3182 . + 0 ID=cds.g9859.t1;Parent=g9859.t1 #PROT g9859.t1 g9859 MAVMSLRERARASIQGMFYGDAIAMPVHWYYSLSQLKRDFGAIRGYEAPKMHLQGSILNLSATGGGGRGSDQGDVIGSVINHGKRQYWARGQNYFYHCTLQRGENTLECQVARVLLRHLAANSSGFARDSFIDSFTRFMTTPGSHNDTYASTYIRMFFANQRRGVPLANCADNDGHNVDAIDALTCLGPIVATTLVRLGHGAPSDDESVVKRIYTDVEAYLRSLRRSDALPHYGRIYARMLVSLLRGYVAPPPTSAAPIATNTPGDLLRLVACRAAEELDVDLERACREEYASEDPMVACYMSSAMPAMLILLYKYADSPETCLLKSANAGGENVARGAALGSLLGAAYGSSAFPAWMREGLRDGDVIDKEIDAALECA* # ORIGINAL: g9858.t1 original gene structure, not modified by PASA NODE_1994_length_8179_cov_39.5676 AUGUSTUS gene 1113 1535 . - . ID=g9858;Name=g9858.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS mRNA 1113 1535 . - . ID=g9858.t1;Parent=g9858;Name=g9858.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 1113 1535 . - . ID=g9858.t1.exon1;Parent=g9858.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 1113 1535 . - 0 ID=cds.g9858.t1;Parent=g9858.t1 #PROT g9858.t1 g9858 MRLPATHNITAAYIVQPMWTLIVRTMSVGSFNRPHSLRPFARVASGISIARNRRPPPTGSNVNRDAESPKRAGKVDEEDCPSIAGDDICVPGEAITYCGVLADPEETKVKERVSDISGGVLDMDAVGESVRVPSTVPKFG* # ORIGINAL: g9860.t1 original gene structure, not modified by PASA NODE_1994_length_8179_cov_39.5676 AUGUSTUS gene 3655 7897 . - . ID=g9860;Name=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS mRNA 3655 7897 . - . ID=g9860.t1;Parent=g9860;Name=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 7814 7897 . - . ID=g9860.t1.exon1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 7814 7897 . - 0 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 7537 7609 . - . ID=g9860.t1.exon2;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 7537 7609 . - 0 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 6971 7185 . - . ID=g9860.t1.exon3;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 6971 7185 . - 2 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 6575 6792 . - . ID=g9860.t1.exon4;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 6575 6792 . - 0 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 6151 6294 . - . ID=g9860.t1.exon5;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 6151 6294 . - 1 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 5775 5893 . - . ID=g9860.t1.exon6;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 5775 5893 . - 1 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 5337 5465 . - . ID=g9860.t1.exon7;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 5337 5465 . - 2 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 4885 5092 . - . ID=g9860.t1.exon8;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 4885 5092 . - 2 ID=cds.g9860.t1;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS exon 3655 4660 . - . ID=g9860.t1.exon9;Parent=g9860.t1 NODE_1994_length_8179_cov_39.5676 AUGUSTUS CDS 3655 4660 . - 1 ID=cds.g9860.t1;Parent=g9860.t1 #PROT g9860.t1 g9860 MGVVSHQVADVSWHALGVDEGFLSAMGGVNFHDSFSSAHNVGDFGGDIVANYELDLSYIGTVGKWYIPVNDLVEIYTEYYGHAAITGAVIEECTAFLFLGRVGEKIAVGKAFPDYAHKSPFLAESYHEYFVGGVDDMAAWTSLVWHDTIKMIEQGVDTCPKFDTNPVFLDCNVTEGKGETSYARALRKPTKIGAVQKHREFYGTINEATQSPLTIDDVVIKRTDDGAVIMSASPRMQEYLAPKKSLLAVPSYTSGPAIKALITTSTQYARLGWASASGDFNGDGVADLAMGAPGHFVSGNPQNGRVYVVNGGAGLQRNRVIDNDHDFVAEGMDANGRFGSALAVVDLNGDGVDDLAVSAPSTGANSLAYSGKVYVFFGRKGLGLSATPSITISSTDVYNNFGWALTSGDVDGDGHSDLIVGSPYAHAGGRQRGAVSAFSSSIIAPRVSGGASLNLAPSDASWTHNGEHDYDWFGYSVSVRNGFLAVGAPTVRICANADCSFSDSDKQSVGRVYGFKFSSPAAADLIFTVNGEAEYQKLGASVSLGDPLGNGDIRVAMAASTADVSGNAVGIPVTWHMAGSVSVSRVADLQGKTVGLSQASVETTLEGDRNYAHFGWRTAFGRYSGGAGDDLMVASPMRTEDMTGELVGAQEGGAYVFKSGANFPKGKATSNGCGVILPTRPCPATTGVGMIPGDERSRFGSSVTALGGGVVAVGAERSQKGARLGGAVYVF* # PASA_UPDATE: g78.t1, single gene model update, valid-1, status:[pasa:asmbl_7503,status:12], valid-1 NODE_4659_length_1360_cov_36.8233 . gene 122 1217 . + . ID=g78;Name=g78.t1 NODE_4659_length_1360_cov_36.8233 . mRNA 122 1217 . + . ID=g78.t1;Parent=g78;Name=g78.t1 NODE_4659_length_1360_cov_36.8233 . exon 122 187 . + . ID=g78.t1.exon1;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . CDS 122 187 . + 0 ID=cds.g78.t1;Parent=g78.t1;5_prime_partial=true NODE_4659_length_1360_cov_36.8233 . exon 431 545 . + . ID=g78.t1.exon2;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . CDS 431 545 . + 0 ID=cds.g78.t1;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . exon 680 786 . + . ID=g78.t1.exon3;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . CDS 680 786 . + 2 ID=cds.g78.t1;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . exon 1142 1217 . + . ID=g78.t1.exon4;Parent=g78.t1 NODE_4659_length_1360_cov_36.8233 . CDS 1142 1217 . + 0 ID=cds.g78.t1;Parent=g78.t1;3_prime_partial=true #PROT g78.t1 g78 IHIDVPRTNPNVPLFQQTIAQEVFERILYIWAIRHPASGYVQGINDLVTPFFAVFLSEFVDGDIEKCDISVVPKQVLDTVEADCFWCMSKLLDRIQDFYTYAQVGIQKKIRALKDIVAKID # ORIGINAL: g9419.t1 original gene structure, not modified by PASA NODE_1324_length_12104_cov_67.7761 AUGUSTUS gene 11876 12104 . - . ID=g9419;Name=g9419.t1 NODE_1324_length_12104_cov_67.7761 AUGUSTUS mRNA 11876 12104 . - . ID=g9419.t1;Parent=g9419;Name=g9419.t1 NODE_1324_length_12104_cov_67.7761 AUGUSTUS exon 11876 12104 . - . ID=g9419.t1.exon1;Parent=g9419.t1 NODE_1324_length_12104_cov_67.7761 AUGUSTUS CDS 11876 12104 . - 1 ID=cds.g9419.t1;Parent=g9419.t1 #PROT g9419.t1 g9419 DGLGKCDGLTGCDSTCPTKTTTLGTTGVALTDLRGDETYYVFRVRTKLSGGDWGELSDPVYARDEPCPSSKALYA* # PASA_UPDATE: g9418.t1, single gene model update, valid-1, status:[pasa:asmbl_1209,status:12],[pasa:asmbl_1211,status:12], valid-1 NODE_1324_length_12104_cov_67.7761 . gene 163 7360 . - . ID=g9418;Name=g9418.t1 NODE_1324_length_12104_cov_67.7761 . mRNA 163 7360 . - . ID=g9418.t1;Parent=g9418;Name=g9418.t1 NODE_1324_length_12104_cov_67.7761 . exon 6868 7360 . - . ID=g9418.t1.exon1;Parent=g9418.t1 NODE_1324_length_12104_cov_67.7761 . CDS 6868 7360 . - 0 ID=cds.g9418.t1;Parent=g9418.t1 NODE_1324_length_12104_cov_67.7761 . exon 5619 6706 . - . ID=g9418.t1.exon2;Parent=g9418.t1 NODE_1324_length_12104_cov_67.7761 . CDS 5619 6706 . - 2 ID=cds.g9418.t1;Parent=g9418.t1 NODE_1324_length_12104_cov_67.7761 . exon 163 5463 . - . ID=g9418.t1.exon3;Parent=g9418.t1 NODE_1324_length_12104_cov_67.7761 . CDS 163 5463 . - 0 ID=cds.g9418.t1;Parent=g9418.t1 #PROT g9418.t1 g9418 MIRMRPVIQRAGRSGRGRAALSLTVAMVVLSGIALLGCSGPGSAAAALRPYYIPPECIFRTSLTVFANDGETTVICTSSTRCFLGKGPVDPLNLEAVIDADYWTPFVPPTVANFFEALNKGDQILAVTGEDGFLYGILDAGLYVSTDNGTSFSPYLVWDCNTAAVTPQCPIVNPTYDPIPPRPDKTLQCSQDAKSTLSVDDQTSNAFYLTWASQETSTDTRYFLECDNYVDYDSGLKQISSITPSATSNYKHGQYMTVASLGLRPSSTIANTRDDYFVWWKTSASDSGPLTGTTPVFADISGITTAGDVCNAVVKALFNAGIAGNSTGLTTADNVVRATCDGSGNTDLNIEQLVSGAIPVHQRLHRGTVMKSTSSATAATGVGSVGYVGPEYATLTITGPSMTKGAASGGAVLGPKSIPSNGNWYIGNAKSGLWEYFYFYNNGGCADNKAVVNATSSRIHRIDVTGVSTTNGIADAINTAANDIDGFTAGITLGADTKQTHTLTAAARSRLLDGSQFFIVDETGKLWTWYFDKSGNRTSPLTQPTNPSGVFTRIDISSANGRTTANEIAVSIRDAINGVYNTPFNATIATDFKTPIITVTQNALAVPATRGRVTIAMLDSTAMEPGVGGIIPLMTVEGAYFRVCFESDGKADVGSFVGSCKKNTTAAGSIIEVVLVTGATAQDNAAALTLALNTPANYPGGIVPFLAEQGVGVNTDKVYVWQRAPGNVPIRSVATISGDNPSATPDGMSFVLVSQDGTFSPRLCYERNIGTCNGASIKVNRNDTYIAVRTITSGSDPTVTLDVGHGFGNDDLVVFLETNDGGGASKLAQRGFRVASKSGNQFKLISNAAVTTTSAGNTGKAYKAAGATDRVSDATTNTDADGTITKSGHGLSNDDVIFFTGEASAVANFAGGKLCLVASVGSGTFKCGGKINTASETGVVYYKVADDSTKIAVSSVTVGANPTITTSAQHRLEVGDVLIYPFPRNAMSQLVDGGVWQHKFFRVASVPTLTTLTVTPSITTTTTAAGYIFRGVIDSKTHSVHGFKRVMDAHAVFPLHFETFVRDSVSFDKLSVVQKKNGTVPNLYQHKITDQSAQNAPSGMRFVLFDITNNNRKIDICIEHTITGPGGQCEPSTDPTNVVVEVQVYTKVLGLTIGANPTVTLQRSHGLLNDRIIAFLGVNGGGSAINQRAFKVAGLSDATMRLLPQVTTSANATKGFAYELNSSRKIALSASASSDTTFTGPSDPSGILANDDVIYIPGSATTGTSFSSGVICVVASYDAHASSADTWKCNTPRAASATNAGIDYWVVSTASSKKTVSSIDAGTSPLITFSAAHGLRLGDLVFIEVMAGLAAGDVALFKDKIFRVLSIPTATTLTLDPPLASSVSAGGSGFLWPINVKDPQTQVIVKQFLETVSNPANYPGAVAPFYLGAMTSNYNYLQQKASGVPLGRPTFTLTVDTPANTNDGGIFKFYLQDSSAVSVCFTKGAVCPPASAQQLTVNLTGLTTSSDVAKVLAKILHEAAIPGIGDLTASLGGTSGVTIYLLPGTVPTKKPELFGNGAATALCNNWAVTDVTASYASMIGTFNVAAAYTAPVSWNVDAVANPTYVNTAGNSPAWAVQFGDDTAATFLSTATKSSAGVPVGTINPGDVMIAISSVPYAAGTPTVNITNTVHANLVPHPTKGNSLNGITFAGFAGYIQDKQKITLPSKTNIAHGQAITFWSILGGLKKYAVQFLTLPTGTFTPRPELNEVVVDVSDSPSAAALSDRLVTALDPLPGLSVAIGRQQVQITCDAAANTSHALNFNLFDAATNHQFVVWMDKGGAAFTLPTGASGVKVTLGDAVSADDVAKKIIAAATADTAFSAVFRTVRKTANVVRFIQKSGGEVVGRARIKLTVDSSDYSNAGIGSNLIHLFSLSKEYTVCIKQLTADCPLSPSAERATIDCTNSTNCDTPAKMLPRVQSAIDGFGSVFTTQNVSTTLYITVNATGASLASYVDWLAGSWTLVNLVDAGQMPRGATGADFDAGNAGKDGIFVGPTESIGAWRYKQIIKGSSGVYVEQDVTQASNTDVASTGNTDATLIVTPAITTGAAGFRVFGDGTTGRNINTSPYATEGRTVSNMSGTLEGFDASLASTQINCRLWAASVNTSTPSGYGKPCTLGGSVTGTLGAAESTTSAPLKMYPPTVVFTAYDKATVKWMEPESKGTNTAAFSAATTEVQYKRCDDGLGKCDGLTGCDSTCPTKTTTLGTTGVALTDLRGDEAYYVFRVRTKLSGGDWGELSDPVYARDEPCPSSKSLYA* # ORIGINAL: g2791.t1 original gene structure, not modified by PASA NODE_8717_length_358_cov_38.6325_potentialcontaminant AUGUSTUS gene 2 358 . + . ID=g2791;Name=g2791.t1 NODE_8717_length_358_cov_38.6325_potentialcontaminant AUGUSTUS mRNA 2 358 . + . ID=g2791.t1;Parent=g2791;Name=g2791.t1 NODE_8717_length_358_cov_38.6325_potentialcontaminant AUGUSTUS exon 2 358 . + . ID=g2791.t1.exon1;Parent=g2791.t1 NODE_8717_length_358_cov_38.6325_potentialcontaminant AUGUSTUS CDS 2 358 . + 0 ID=cds.g2791.t1;Parent=g2791.t1 #PROT g2791.t1 g2791 DESLRSDPAFMSLPHVVMNDKTKPYARVILMRAMTESEWDALKTHGIIPLGPDMCVLCQRREILKVHMANLGNKNRTSATCLVRQTFHNEYDRVGEYARKFMFAPSPKCFTGLIGAVPK # ORIGINAL: g2244.t1 original gene structure, not modified by PASA NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS gene 102 958 . - . ID=g2244;Name=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS mRNA 102 958 . - . ID=g2244.t1;Parent=g2244;Name=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS exon 889 958 . - . ID=g2244.t1.exon1;Parent=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS CDS 889 958 . - 0 ID=cds.g2244.t1;Parent=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS exon 579 612 . - . ID=g2244.t1.exon2;Parent=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS CDS 579 612 . - 2 ID=cds.g2244.t1;Parent=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS exon 102 288 . - . ID=g2244.t1.exon3;Parent=g2244.t1 NODE_4132_length_2140_cov_30.3831_potentialcontaminant AUGUSTUS CDS 102 288 . - 1 ID=cds.g2244.t1;Parent=g2244.t1 #PROT g2244.t1 g2244 MRVKIGIHRGKIVGGIVGKLKFCYDVFGDTVNTASRMCTTCPQPMAVHVSSAAADALVGRFKLESCGTIEVKGKGAMETFLVLEELILDEPIVPQIP # ORIGINAL: g2911.t1 original gene structure, not modified by PASA NODE_4791_length_1245_cov_29.2761_potentialcontaminant AUGUSTUS gene 1 1085 . - . ID=g2911;Name=g2911.t1 NODE_4791_length_1245_cov_29.2761_potentialcontaminant AUGUSTUS mRNA 1 1085 . - . ID=g2911.t1;Parent=g2911;Name=g2911.t1 NODE_4791_length_1245_cov_29.2761_potentialcontaminant AUGUSTUS exon 1 1085 . - . ID=g2911.t1.exon1;Parent=g2911.t1 NODE_4791_length_1245_cov_29.2761_potentialcontaminant AUGUSTUS CDS 1 1085 . - 0 ID=cds.g2911.t1;Parent=g2911.t1 #PROT g2911.t1 g2911 MDAQDLIGNKRKSSSSNSSSASSSSSDDRRRRLSRSRSRSRSTSRSSSINSSSSRASAAKRRSREKRSDSSSSSSRSPSSSPTSKRKINASESRELSRSRSRSSSPQRKNVSQNESALSRPMSSTTVRSDEVEEEEYSESVAEIESEDPSEKARPPKATAPDASSSRTTDHGVFLRVPSTPSVSQKLHQSTPHSHSQGGRSEDVSYRDDFTGDGELSAVEKNGGDRTDASLSDSDDGSNGSKVSDKRAPKPVMNNSLPAKDKNGLSRPISSKAGGKETQHDEKGDAGISARKGEREDGTWAKPRSNKRGSGSRRHRRRTHSTSGSESDSYDDPTSSFYTESASTATSVDERRRRKSRKHGR # ORIGINAL: g2734.t1 original gene structure, not modified by PASA NODE_10650_length_302_cov_70.6035_potentialcontaminant AUGUSTUS gene 2 302 . + . ID=g2734;Name=g2734.t1 NODE_10650_length_302_cov_70.6035_potentialcontaminant AUGUSTUS mRNA 2 302 . + . ID=g2734.t1;Parent=g2734;Name=g2734.t1 NODE_10650_length_302_cov_70.6035_potentialcontaminant AUGUSTUS exon 2 302 . + . ID=g2734.t1.exon1;Parent=g2734.t1 NODE_10650_length_302_cov_70.6035_potentialcontaminant AUGUSTUS CDS 2 302 . + 1 ID=cds.g2734.t1;Parent=g2734.t1 #PROT g2734.t1 g2734 MAFPPVELKMKEGAPPARIFYPLRSPEKRAALKAEIERARRGGVIRRLSKEQVRRALYLTVPSLAPKPDKTFRMVVDYRNINPFIEIKMRTEIPHEEEFL # ORIGINAL: g14375.t1 original gene structure, not modified by PASA NODE_355_length_26125_cov_41.3111 AUGUSTUS gene 8410 10790 . + . ID=g14375;Name=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS mRNA 8410 10790 . + . ID=g14375.t1;Parent=g14375;Name=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 8410 8476 . + . ID=g14375.t1.exon1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 8410 8476 . + 0 ID=cds.g14375.t1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 8986 9137 . + . ID=g14375.t1.exon2;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 8986 9137 . + 2 ID=cds.g14375.t1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 9311 9397 . + . ID=g14375.t1.exon3;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 9311 9397 . + 0 ID=cds.g14375.t1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 9598 9755 . + . ID=g14375.t1.exon4;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 9598 9755 . + 0 ID=cds.g14375.t1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 9984 10236 . + . ID=g14375.t1.exon5;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 9984 10236 . + 1 ID=cds.g14375.t1;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 10506 10790 . + . ID=g14375.t1.exon6;Parent=g14375.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 10506 10790 . + 0 ID=cds.g14375.t1;Parent=g14375.t1 #PROT g14375.t1 g14375 MPRRVRTALKWPQSEFQEFPLASSLTVGEFEDAYAVVLSRIFRVVTVTLNGEQRLTPAMVPLVDMINHGDGDDHATFRMGHYNDGTSAFVVQVTRSYVAGEEILTTYGLTSNDDLLLHYGFQIVDNPNNLHRFSIPPPPRPTPLQSRLLQAAGIGLAHEFRIHPGGCPLNASLVFYASLMATVVEDPAAAKLLASTLSFIAESGRAMTSLDIPCRRITLEYLFTLFRQFIGRGFQTSIDDDRQTVTAYGLRTPEGALAQYHMDQKGLIINAMGFVEYALALLNEAGAESEQRRLTFQDVCDRQGGRRTPSAIDYDYSARIHSAASGTRATDDL* # ORIGINAL: g14377.t1 original gene structure, not modified by PASA NODE_355_length_26125_cov_41.3111 AUGUSTUS gene 16918 19474 . - . ID=g14377;Name=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS mRNA 16918 19474 . - . ID=g14377.t1;Parent=g14377;Name=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 18629 19474 . - . ID=g14377.t1.exon1;Parent=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 18629 19474 . - 0 ID=cds.g14377.t1;Parent=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 17779 18308 . - . ID=g14377.t1.exon2;Parent=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 17779 18308 . - 0 ID=cds.g14377.t1;Parent=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 16918 17476 . - . ID=g14377.t1.exon3;Parent=g14377.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 16918 17476 . - 1 ID=cds.g14377.t1;Parent=g14377.t1 #PROT g14377.t1 g14377 MTTTDPEPAAAPVSLHPCCKRDMSGIAGLEMRDSTTPTTATTPATTTTITAGCVAAAAAECDCLCKGCTEDALLDASLLSVREGETTEEFYARNNVSAGAMEALYEIKMSGMAIVDRGELTPVGRREISAIPYEEFKAIALSEMPKRCDAARADLETRLAKCRCAKSSPASSTADATAAFMTETEARATAESILKILTNKRNRRGVASLFDVCRGEYERRLVDLCGRGERICLALPSFPVKCFNPLKVSRRMPDLAEMWCLLRVHCLCVEIAAVYAPAAYVQLITDGQVYAPIFQEPMQMAMEYRYDLERSITALGIADTVRLVDMYDLVAERSAEYMRERPAARDRVLETWKNHPKVRDALVANTMGNINTLGEVTTYRNAETLAPVVCAVEPGAVTAATHPYDALRAVFLRRASAAGDVAVALEASLRARAEAVALEYATFLETIFAMNVVMTKYPRALRVTCHPKQGQLGLHMIHPNSFNYPWNGVAVLYRSAASSDHVSVRVRFEDEVRREDGFVAVHVTGDPFPFYYEQTVESNVRRRNKRKSGKRKGLGLSGAEGTLSSSLLLQHGLARVSADDGETKLQGSAPFSVSATVATEEEMLLSNGETGATPPLSAARSEDSLGSVDDFVECDCGCAQCDCR* # PASA_UPDATE: g14378.t1, single gene model update, valid-1, status:[pasa:asmbl_6217,status:3], valid-1 NODE_355_length_26125_cov_41.3111 . gene 20018 20922 . + . ID=g14378;Name=g14378.t1 NODE_355_length_26125_cov_41.3111 . mRNA 20018 20922 . + . ID=g14378.t1;Parent=g14378;Name=g14378.t1 NODE_355_length_26125_cov_41.3111 . five_prime_UTR 20018 20077 . + . ID=g14378.t1.utr5p1;Parent=g14378.t1 NODE_355_length_26125_cov_41.3111 . exon 20018 20169 . + . ID=g14378.t1.exon1;Parent=g14378.t1 NODE_355_length_26125_cov_41.3111 . CDS 20078 20169 . + 0 ID=cds.g14378.t1;Parent=g14378.t1 NODE_355_length_26125_cov_41.3111 . exon 20332 20922 . + . ID=g14378.t1.exon2;Parent=g14378.t1 NODE_355_length_26125_cov_41.3111 . CDS 20332 20890 . + 1 ID=cds.g14378.t1;Parent=g14378.t1 NODE_355_length_26125_cov_41.3111 . three_prime_UTR 20891 20922 . + . ID=g14378.t1.utr3p1;Parent=g14378.t1 #PROT g14378.t1 g14378 MKDYQEQFIHLATECKVLSFGEFKLKSGRISPYFFNAGLFNRGAALAKLGRYYASAIVDSGIEFDVLFGPAYKGIPLAASTAVSLALDHGRDIPYAFNRKEAKDHGEGGNIVGHPLVGRVLIIDDVITAGTAIRESIDIITAAGAQPVGVVLALDRNERGKEGDLTAVQEVTAQFGIPVVSIVALDQITEFIRSSGSDAALLAKIEAYRAEYGPRQ* # PASA_UPDATE: g14376.t1, single gene model update, valid-1, status:[pasa:asmbl_6214,status:12], valid-1 NODE_355_length_26125_cov_41.3111 . gene 11611 15760 . - . ID=g14376;Name=g14376.t1 NODE_355_length_26125_cov_41.3111 . mRNA 11611 15760 . - . ID=g14376.t1;Parent=g14376;Name=g14376.t1 NODE_355_length_26125_cov_41.3111 . exon 13758 15760 . - . ID=g14376.t1.exon1;Parent=g14376.t1 NODE_355_length_26125_cov_41.3111 . CDS 13758 15760 . - 0 ID=cds.g14376.t1;Parent=g14376.t1 NODE_355_length_26125_cov_41.3111 . exon 11611 13504 . - . ID=g14376.t1.exon2;Parent=g14376.t1 NODE_355_length_26125_cov_41.3111 . CDS 11758 13504 . - 1 ID=cds.g14376.t1;Parent=g14376.t1 NODE_355_length_26125_cov_41.3111 . three_prime_UTR 11611 11757 . - . ID=g14376.t1.utr3p1;Parent=g14376.t1 #PROT g14376.t1 g14376 MSERSTSDAIRLEDGCLHLVSHGPNKLFTQPKTMRFYYPIGNCAPVDLFARSPPSTSNSVLMLGSGDIRSVFYTLAKIAFTPHEATQTTRTTTSSSVASFSPRAYCHFLVNDISAAIVARNVLLVYMIVKHIGPINRTSVERGVSASVRLAIARLWSIAFNFGLTAEEDALLEEALGQLTDASRSDQAWYEFPLSRLVTFEGRTTLTAVREVWMMWSGLGLRKRLQDAKAIFSERKSRKLAGKITAAEMLNPLMGHSHWRQSSHGDFASTLLAHGPMLESLDLPAAAIMGLETDGARRVAFFNPTMTDVADDVTLHYGTNFFLCFFHSFIFDSASHFSLPKSDVPESGSKPSSDRAAAGRASSLPYVQCVPAAKFKTRTLAANCVQQFSLWMLGTASILCDDESDAPVSKNRFTARLTVHCGDCLALCDELAMRNQWRQTPLINSDQTRLPMPYKASYIHVSNVGDSVGLFNLLLCATPLLNAESVGAMISCDTFFSAFIGDTLDTFLAAISGNISRELFPALLGIITCGLEGRLASDLAVWPSSDVSRLLFEHLNSPRADAKLIFQRLPLSAKKSLPIRLEGEILSFLSAAVLSFCRFDIPVSFTTAGTAARLLLQAAQSMGLSNTPEGWQPLCDELALVRHLDPYVAELQDSMWSHRLHAHLVPESAGMCPMCTGLDFQQLKRHVIRVPLRESHITRRSGCYHVRLRCPSMGLSCIVTRSLPSEELLWVPIPTMVHAALVDNADSDVLVVPFDNSDQPSDLIATRLSLVHVMPMQVSFAVTYTDPQSTASVGVNLDVDVDDDAPPMRIESVLEELTHSEVVIAIGPSVDIPPAAAANKFLFASVTPYSASVTLPKAVRGERDVSVVVSFACPVNGGRPTKIQLGRTSRKMTVHFAKVPYEVEGAMLHYANARCLIAYPISRFADGPETVLLSGLQMTGEERKVMEEPQRANVHTLSPRSATKETIAGLLQTNKQYAQLVVDGESVDCVLYRHGLRYDVENDRALIDASVCVLTLPRLRDTVPYWQRCILNASADCNSIIVSPPELAFFKRLVAMQRELTTCPLKPWREHFERYFLCPLYSFELERGVGSLQSPGLAIREAHRISAYRAVQNAYARVEDVGSTAQMNGVPRSSHLVAAKSATSAAATPSRAPTTQPPAIAKRKMAGSPVDDNAAPPPAQSNAPQAAQKDGSATDANRRCGSCGTASSKKRCGACRVMYYCSAACQKAHWAAHKPICGKAGKAGSSSAD* # ORIGINAL: g14380.t1 original gene structure, not modified by PASA NODE_355_length_26125_cov_41.3111 AUGUSTUS gene 25422 25904 . - . ID=g14380;Name=g14380.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS mRNA 25422 25904 . - . ID=g14380.t1;Parent=g14380;Name=g14380.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 25422 25904 . - . ID=g14380.t1.exon1;Parent=g14380.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 25422 25904 . - 0 ID=cds.g14380.t1;Parent=g14380.t1 #PROT g14380.t1 g14380 MFFAISLSITNSISERDYDHLSLGEFFDRRSRTFAPFFARNFAAKTERGSSGLYGAVSGAGGGGLALGGGVQQREVRFAPNLPTTLMKAIEKARIVHGPNASRITDTDRRRALGKLEKMYGQILPRNDRASHHHPRREKRPEVTAPGIAVTGPHTTLDVV* # ORIGINAL: g14379.t1 original gene structure, not modified by PASA NODE_355_length_26125_cov_41.3111 AUGUSTUS gene 21457 24148 . + . ID=g14379;Name=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS mRNA 21457 24148 . + . ID=g14379.t1;Parent=g14379;Name=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 21457 21668 . + . ID=g14379.t1.exon1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 21457 21668 . + 0 ID=cds.g14379.t1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 21854 22043 . + . ID=g14379.t1.exon2;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 21854 22043 . + 1 ID=cds.g14379.t1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 22211 22294 . + . ID=g14379.t1.exon3;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 22211 22294 . + 0 ID=cds.g14379.t1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 22441 22519 . + . ID=g14379.t1.exon4;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 22441 22519 . + 0 ID=cds.g14379.t1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 22954 23144 . + . ID=g14379.t1.exon5;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 22954 23144 . + 2 ID=cds.g14379.t1;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 23795 24148 . + . ID=g14379.t1.exon6;Parent=g14379.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 23795 24148 . + 0 ID=cds.g14379.t1;Parent=g14379.t1 #PROT g14379.t1 g14379 MASATREAVLRVDASMGDVVIVDIEGTVTPLPFVAEILFPYCRHNVRRWLSTNIGTEKGMDAVSRLRSQHEQDTQNQVDSPAICVSNADESSLVESVLANVLWNMDRDRKIGALKHLQGLVWREGYASGELKGEVFDDVPPALQRLKEAGVRSFVYSSGSIEAQKLLFGFSIAGDLLPYFDGHFDTTTGPKLEAASYSAIANAVGVGAHPSRALFLSDHPGECDAAVAAGMRAAVVIRPRNNPLADGVDSRHAIHDPAATLQVFHCDVAAHNLARYQDSDFMKVLLMGFGCAVVVNADLEADDKFAEATAKSDMQVPYSGSMWYASTSALEQLIDGDEVVDDGGDSSWNCHTAWMGTVRVTPHSTSRAS* # PASA_UPDATE: g14373.t1, single gene model update, valid-1, status:[pasa:asmbl_6215,status:12], valid-1 NODE_355_length_26125_cov_41.3111 . gene 142 2313 . + . ID=g14373;Name=g14373.t1 NODE_355_length_26125_cov_41.3111 . mRNA 142 2313 . + . ID=g14373.t1;Parent=g14373;Name=g14373.t1 NODE_355_length_26125_cov_41.3111 . exon 142 334 . + . ID=g14373.t1.exon1;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . CDS 142 334 . + 0 ID=cds.g14373.t1;Parent=g14373.t1;5_prime_partial=true NODE_355_length_26125_cov_41.3111 . exon 566 690 . + . ID=g14373.t1.exon2;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . CDS 566 690 . + 2 ID=cds.g14373.t1;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . exon 897 992 . + . ID=g14373.t1.exon3;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . CDS 897 992 . + 0 ID=cds.g14373.t1;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . exon 1419 1645 . + . ID=g14373.t1.exon4;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . CDS 1419 1645 . + 0 ID=cds.g14373.t1;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . exon 1964 2313 . + . ID=g14373.t1.exon5;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . CDS 1964 2066 . + 1 ID=cds.g14373.t1;Parent=g14373.t1 NODE_355_length_26125_cov_41.3111 . three_prime_UTR 2067 2313 . + . ID=g14373.t1.utr3p1;Parent=g14373.t1 #PROT g14373.t1 g14373 SDLQGVKTTAVRDGDHYVINGQKTFITNGAMADYVIVVCKTDPAQGAKGTSLIMVEADREGFAKGRKLNKLGLKAQDTSELFFDNVRVPVTNVIGKENRGFVYLMQELAQERLIIAILSHSSSEGLFETTRKYVAERKAFGASIDSFQVNRFKLAEMKTELVVGRTFLDRCIDLHNRKELDAAGAAMVKYHITEVQGKIADQCVQLHGGYGYMWEYDAARVFADARVQRIYGGTNEIMKELIARTIC* # ORIGINAL: g14374.t1 original gene structure, not modified by PASA NODE_355_length_26125_cov_41.3111 AUGUSTUS gene 2837 6378 . - . ID=g14374;Name=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS mRNA 2837 6378 . - . ID=g14374.t1;Parent=g14374;Name=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 6131 6378 . - . ID=g14374.t1.exon1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 6131 6378 . - 0 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 5936 6011 . - . ID=g14374.t1.exon2;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 5936 6011 . - 1 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 5286 5676 . - . ID=g14374.t1.exon3;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 5286 5676 . - 0 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 4558 5021 . - . ID=g14374.t1.exon4;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 4558 5021 . - 2 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 4004 4195 . - . ID=g14374.t1.exon5;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 4004 4195 . - 0 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 3563 3690 . - . ID=g14374.t1.exon6;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 3563 3690 . - 0 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 3153 3327 . - . ID=g14374.t1.exon7;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 3153 3327 . - 1 ID=cds.g14374.t1;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS exon 2837 2992 . - . ID=g14374.t1.exon8;Parent=g14374.t1 NODE_355_length_26125_cov_41.3111 AUGUSTUS CDS 2837 2992 . - 0 ID=cds.g14374.t1;Parent=g14374.t1 #PROT g14374.t1 g14374 MSSSTALGYLAAAFRYIVGRDSLSGIQRVQVDAPSDTLAGGFEGLGDEDASEDAVVCASESHHVFSQWVKRAVGCSTQYGKNAYGMRHIVGLPTVYPHYGDRTDTLKLRTYGSWWRTSPSAPPPLSHRPHSFASHDYVDIEFDVSVYPIEVVVYETFNPGAVSRIIAIADKRSPPDTSESSMEDAHTQWQVLWEGDSSLTGADAFEAARKLTLKLKKARFPSKLLRVEFNAAGCHYHPAIDAIELRGTMDDPYTPSQRLQSERAARRRANIVSNPGILSFADLPVEIALHVFLYLDHRDMCRLASVCKFMRALAYDPRWWSDVDLQPFSVGVGDDALARIVESRLCGGSVARMSLSWCSVSEASFASAMGRIGRTLRTLRLANCPFLTTDAILGARWPAVAPNAFAALDSLNLRRMNLFDTCVSTVVLVHLARGMSQLSHLNVGQSDALQDTTRLVMVIAGHCSNMRSLCVSRCRGLHDFALMDLGARCPLLEELDIGYGELIITGRGGISAVTAQCHHLRRLCLAGIIRTLSADIAPLVNCSHLVQLDVSETPVDAGAVGEILSRCINLALLDVTFCPRIEWSDVDLWRRAYPSLDIKSNASDLSIDS* # ORIGINAL: g5398.t1 original gene structure, not modified by PASA NODE_1283_length_12421_cov_33.1063 AUGUSTUS gene 11059 11631 . - . ID=g5398;Name=g5398.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS mRNA 11059 11631 . - . ID=g5398.t1;Parent=g5398;Name=g5398.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS exon 11560 11631 . - . ID=g5398.t1.exon1;Parent=g5398.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS CDS 11560 11631 . - 0 ID=cds.g5398.t1;Parent=g5398.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS exon 11059 11265 . - . ID=g5398.t1.exon2;Parent=g5398.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS CDS 11059 11265 . - 0 ID=cds.g5398.t1;Parent=g5398.t1 #PROT g5398.t1 g5398 MDQYPRYPDIDEVVVPPEDMGLSMDMRPYMNPCPYLIQHKCPLHRVFELFRTMPGLRHLVVVNRRNCVVGIITRAAPTSRPVCDFSPSPTPA* # PASA_UPDATE: g5396.t1, single gene model update, valid-1, status:[pasa:asmbl_1073,status:3], valid-1 NODE_1283_length_12421_cov_33.1063 . gene 3166 4825 . + . ID=g5396;Name=g5396.t1 NODE_1283_length_12421_cov_33.1063 . mRNA 3166 4825 . + . ID=g5396.t1;Parent=g5396;Name=g5396.t1 NODE_1283_length_12421_cov_33.1063 . five_prime_UTR 3166 3337 . + . ID=g5396.t1.utr5p1;Parent=g5396.t1 NODE_1283_length_12421_cov_33.1063 . exon 3166 4103 . + . ID=g5396.t1.exon1;Parent=g5396.t1 NODE_1283_length_12421_cov_33.1063 . CDS 3338 4103 . + 0 ID=cds.g5396.t1;Parent=g5396.t1 NODE_1283_length_12421_cov_33.1063 . exon 4352 4825 . + . ID=g5396.t1.exon2;Parent=g5396.t1 NODE_1283_length_12421_cov_33.1063 . CDS 4352 4701 . + 2 ID=cds.g5396.t1;Parent=g5396.t1 NODE_1283_length_12421_cov_33.1063 . three_prime_UTR 4702 4825 . + . ID=g5396.t1.utr3p1;Parent=g5396.t1 #PROT g5396.t1 g5396 MSEVSQWLERTGLMTHTLKFRKLKTLAEVAALSDADLSGMGIADEAIRASIMSEVTALKNGDTGGSKVAATPPRAGTQSAAFRQRAASVGAAPSPVSKPFGATPPPVLPKSTAVRRLSSEGDAAGPPSPAAASHESTIPEEGHVPAADESSTARRSSVSSLAKAFANVPAVEKTPPTVLPRPRPLREGGAFAVGGASPAVDAQGADEGKKDAGAAVTPRRISLPATFNPMVMSPMGRPPLSKPPAAQEEEAVAEKATDAPEDVGDLSTIVKSRPRQENKRRPSRGSIRQSRLSMTAADQEAFDTLVATGTLPSESTQSTSTAIAAATVDAPNGDSIAISASAETSASSEKLSEANAGGDGVAVEDKIAVAE* # ORIGINAL: g5395.t1 original gene structure, not modified by PASA NODE_1283_length_12421_cov_33.1063 AUGUSTUS gene 103 644 . + . ID=g5395;Name=g5395.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS mRNA 103 644 . + . ID=g5395.t1;Parent=g5395;Name=g5395.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS exon 103 644 . + . ID=g5395.t1.exon1;Parent=g5395.t1 NODE_1283_length_12421_cov_33.1063 AUGUSTUS CDS 103 644 . + 2 ID=cds.g5395.t1;Parent=g5395.t1 #PROT g5395.t1 g5395 VAHLASALLCVLKLAAGIMLGQAFVQRVWDSSPDYSGHPISDYYYFLTLPLVAWSFMVMLRSRMNEFWSVMIACLLGYVGGSVLGERLGTNLSSFVGAFMVCAFANASTWVWREGVASVPIFTGTLLLVPGSMGVKGVLELGGSLDSDQNYFLQMFLVALFICQGLFAANLVIRPHKAL* # PASA_UPDATE: g5397.t1, single gene model update, valid-1, status:[pasa:asmbl_1074,status:3], valid-1 NODE_1283_length_12421_cov_33.1063 . gene 4804 7746 . - . ID=g5397;Name=g5397.t1 NODE_1283_length_12421_cov_33.1063 . mRNA 4804 7746 . - . ID=g5397.t1;Parent=g5397;Name=g5397.t1 NODE_1283_length_12421_cov_33.1063 . five_prime_UTR 7548 7746 . - . ID=g5397.t1.utr5p1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . exon 6488 7746 . - . ID=g5397.t1.exon1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . CDS 6488 7547 . - 0 ID=cds.g5397.t1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . exon 6010 6155 . - . ID=g5397.t1.exon2;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . CDS 6010 6155 . - 2 ID=cds.g5397.t1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . exon 5671 5760 . - . ID=g5397.t1.exon3;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . CDS 5689 5760 . - 0 ID=cds.g5397.t1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . exon 5274 5511 . - . ID=g5397.t1.exon4;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . exon 4804 5149 . - . ID=g5397.t1.exon5;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . three_prime_UTR 5671 5688 . - . ID=g5397.t1.utr3p1;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . three_prime_UTR 5274 5511 . - . ID=g5397.t1.utr3p2;Parent=g5397.t1 NODE_1283_length_12421_cov_33.1063 . three_prime_UTR 4804 5149 . - . ID=g5397.t1.utr3p3;Parent=g5397.t1 #PROT g5397.t1 g5397 MCVVGLLCACGVGASGDVSCQDALQRTSQHSDSERKQRSTGARQGRSAHPSNPFSDRKTTKSGTAAISHRTVLRATIGAANHVPGVGVGKNADGVLVQRRHVPQYLSRHGNGASIGGALFLLCTSHATLAFHLRPFSNTLESACCAVIALATVLAIDGLMLPADKTASRRVGGHSRAQHPTLWSVCAVAVTAFGVFARFTVAIFALPLLCGLAAAATGMLQRREDGRVICVPPTAASLHRGALLLLPSVLAGVLVVFLCIVADSVYFTGLERVVATPFNLFLYNTNVDNLRLHGEHNRLTHIAVNAPLMFGPLFVFMLWGAIRYHGEPYVPLSDEDSVVVSNTHRSNRVVAINCLLMSTAAFVAALSAAPHQEPRFLLPLLAPLVVLSGHSVCGSGSSRRMLVLFRQCAISPLPFATTITLALTQ* # ORIGINAL: g2202.t1 original gene structure, not modified by PASA NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS gene 145 1149 . + . ID=g2202;Name=g2202.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS mRNA 145 1149 . + . ID=g2202.t1;Parent=g2202;Name=g2202.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS exon 145 592 . + . ID=g2202.t1.exon1;Parent=g2202.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS CDS 145 592 . + 2 ID=cds.g2202.t1;Parent=g2202.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS exon 825 1149 . + . ID=g2202.t1.exon2;Parent=g2202.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS CDS 825 1149 . + 1 ID=cds.g2202.t1;Parent=g2202.t1 #PROT g2202.t1 g2202 SNGNGTIAGSPRASTKRNTAPSAHPLQHSQSSTVMPGLLTPQLRTSAPVVVGLPAPETAHVRSRSSEQGGLYFQPQQQQQQYGDTASERSIDSREQSVDLDGDTNTSGGDLLGAHALTRRLSAVAFGGRGRTPTVVWPQESQGAEEEARFMLSALLSASYFDWALLLAIMLGDFEAVADVGEAAAACKEGDDGVKESLWRRFLVLSANTQLKGRYGAVFDMVGRILAEAGSAPASAKNGAGMLGDKRHSCFDVAFE* # ORIGINAL: g2203.t1 original gene structure, not modified by PASA NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS gene 2112 4947 . - . ID=g2203;Name=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS mRNA 2112 4947 . - . ID=g2203.t1;Parent=g2203;Name=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS exon 4094 4947 . - . ID=g2203.t1.exon1;Parent=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS CDS 4094 4947 . - 0 ID=cds.g2203.t1;Parent=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS exon 2739 3719 . - . ID=g2203.t1.exon2;Parent=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS CDS 2739 3719 . - 1 ID=cds.g2203.t1;Parent=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS exon 2112 2574 . - . ID=g2203.t1.exon3;Parent=g2203.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant AUGUSTUS CDS 2112 2574 . - 1 ID=cds.g2203.t1;Parent=g2203.t1 #PROT g2203.t1 g2203 MSNVGGAELLAAVGISAVTNGPIFNGHNNVVTSVAYSPDGRTVASGSHDSIVRLWNAETGACIHSLNGHAGNVITSVAYSPDGRIVASGSYDRTVRLWNAETGVCIRVLNGHNNVVTSVAYSPDGRTVASGSHDSIVRLWNAETGVCIRTLTGHTVLVHSVAYSPDGCVIASGSQDNTVRLWNAETGEYIHTLNGHTGPVCSVAYSPDGWDIVSGSGDRTMRLWNLTLFHAVALSVALPPDSSREYVTASADRTIEDSVDTWARIHTTVTSQLKEMKAAEDALRRKKPISREDVAGAVTRMRQAFISSLGSPFAEREWSLQAKKLSPSQPSLFDALSTDLRSVKATGLFTDQNDAIDSLIATLDEIRDNAKIADPEITRTIAEALTAHAFAPVGRFVNTDVNQRLLETNKQRVEIVAAIVDSRNRAADKTKPSGLPDAERDLSSALNRLTMNVEEVGTLSVDASSLCEEFTVTSTRSIEAVKTMSESLAAKCATEAEGAAQGKVCMETAWAALCADVQAKMDAADAAWAAVAVEEKAISDTSASATEEHLFHGLKSLHSIVVRRQALSALIKDAAEKRDCARAAVEGARTIERECPAAVRYFVRCGSTRTCRAELTILEEKYARKVDECYIERAESLALADASDPEILSNKLAKAEESLELTRTRKDQLQGILSLCTSDFLSEIASKLGKPSLQSTADDERATKAASIVATLQQAAAARLSRSSTPVDAALAVLSAPSVLTVTGGSTPLSIAPAERHQLPGRQLP* # PASA_UPDATE: g2204.t1, single gene model update, valid-1, status:[pasa:asmbl_4046,status:12], valid-1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . gene 5319 6446 . - . ID=g2204;Name=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . mRNA 5319 6446 . - . ID=g2204.t1;Parent=g2204;Name=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . exon 6314 6446 . - . ID=g2204.t1.exon1;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . CDS 6314 6446 . - 0 ID=cds.g2204.t1;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . exon 5945 6039 . - . ID=g2204.t1.exon2;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . CDS 5945 6039 . - 2 ID=cds.g2204.t1;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . exon 5319 5694 . - . ID=g2204.t1.exon3;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . CDS 5497 5694 . - 0 ID=cds.g2204.t1;Parent=g2204.t1 NODE_2325_length_6721_cov_43.43_potentialcontaminant . three_prime_UTR 5319 5496 . - . ID=g2204.t1.utr3p1;Parent=g2204.t1 #PROT g2204.t1 g2204 MLTTNSPTIASFAQVLAIGAGSGIFVLGGGALLSGGVGLSFALAGLGFLKWRRHTQLNLLLDRTNRLQKALKSELSAAFEKQMRDLIFLSLRSALAESSTKVSARIDSLSQQKIALSALSNALASLESDVLVNDPAMHRSA* # PASA_UPDATE: g5604.t1, single gene model update, valid-1, status:[pasa:asmbl_5535,status:12], valid-1 NODE_3086_length_4357_cov_38.2305 . gene 311 1145 . + . ID=g5604;Name=g5604.t1 NODE_3086_length_4357_cov_38.2305 . mRNA 311 1145 . + . ID=g5604.t1;Parent=g5604;Name=g5604.t1 NODE_3086_length_4357_cov_38.2305 . five_prime_UTR 311 312 . + . ID=g5604.t1.utr5p1;Parent=g5604.t1 NODE_3086_length_4357_cov_38.2305 . exon 311 555 . + . ID=g5604.t1.exon1;Parent=g5604.t1 NODE_3086_length_4357_cov_38.2305 . CDS 313 555 . + 0 ID=cds.g5604.t1;Parent=g5604.t1;5_prime_partial=true NODE_3086_length_4357_cov_38.2305 . exon 845 1145 . + . ID=g5604.t1.exon2;Parent=g5604.t1 NODE_3086_length_4357_cov_38.2305 . CDS 845 919 . + 0 ID=cds.g5604.t1;Parent=g5604.t1 NODE_3086_length_4357_cov_38.2305 . three_prime_UTR 920 1145 . + . ID=g5604.t1.utr3p1;Parent=g5604.t1 #PROT g5604.t1 g5604 QGAATGSLYVDDGDSFAYVQGNYALVDFEFGDNQLVARPRHGADFVCNAVERIIVVGLAKLPATATLKDANDEHAVPIVVESTNRIVVKKPGVDACREWSIVFGV* # ORIGINAL: g5605.t1 original gene structure, not modified by PASA NODE_3086_length_4357_cov_38.2305 AUGUSTUS gene 2157 4079 . - . ID=g5605;Name=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS mRNA 2157 4079 . - . ID=g5605.t1;Parent=g5605;Name=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS exon 3920 4079 . - . ID=g5605.t1.exon1;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS CDS 3920 4079 . - 0 ID=cds.g5605.t1;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS exon 3545 3770 . - . ID=g5605.t1.exon2;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS CDS 3545 3770 . - 2 ID=cds.g5605.t1;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS exon 3023 3214 . - . ID=g5605.t1.exon3;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS CDS 3023 3214 . - 1 ID=cds.g5605.t1;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS exon 2463 2591 . - . ID=g5605.t1.exon4;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS CDS 2463 2591 . - 1 ID=cds.g5605.t1;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS exon 2157 2220 . - . ID=g5605.t1.exon5;Parent=g5605.t1 NODE_3086_length_4357_cov_38.2305 AUGUSTUS CDS 2157 2220 . - 1 ID=cds.g5605.t1;Parent=g5605.t1 #PROT g5605.t1 g5605 MAYMVFEFMQHDLTGLIESGVVFEEGQRKSYLKQILMGLYYLARNNIVHRDIKGANILLNNRGEVKIADFGLARQLPSVARDLATRALEVDVDNERRLTNKVVTLWYRPPELLLGARHYGPAIDVWAVGCIFTEMFRRRVLFPGQDEVSQMDLICQRCGTPTERDWPGVSSLSGFSGIGSSHTRTLRSSFAQHMSPEGLDLLERMLTMDPARRISAGDALDHDYFYTAPAPTPLDRLPEYPDSHELDMRNRRRQQA* # PASA_UPDATE: g4689.t1, single gene model update, valid-1, status:[pasa:asmbl_9142,status:12], valid-1 NODE_741_length_18238_cov_42.562 . gene 185 2689 . + . ID=g4689;Name=g4689.t1 NODE_741_length_18238_cov_42.562 . mRNA 185 2689 . + . ID=g4689.t1;Parent=g4689;Name=g4689.t1 NODE_741_length_18238_cov_42.562 . exon 185 352 . + . ID=g4689.t1.exon1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 185 352 . + 0 ID=cds.g4689.t1;Parent=g4689.t1;5_prime_partial=true NODE_741_length_18238_cov_42.562 . exon 650 772 . + . ID=g4689.t1.exon2;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 650 772 . + 0 ID=cds.g4689.t1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . exon 1433 1502 . + . ID=g4689.t1.exon3;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 1433 1502 . + 0 ID=cds.g4689.t1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . exon 1752 1909 . + . ID=g4689.t1.exon4;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 1752 1909 . + 2 ID=cds.g4689.t1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . exon 2028 2132 . + . ID=g4689.t1.exon5;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 2028 2132 . + 0 ID=cds.g4689.t1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . exon 2363 2689 . + . ID=g4689.t1.exon6;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . CDS 2363 2392 . + 0 ID=cds.g4689.t1;Parent=g4689.t1 NODE_741_length_18238_cov_42.562 . three_prime_UTR 2393 2689 . + . ID=g4689.t1.utr3p1;Parent=g4689.t1 #PROT g4689.t1 g4689 EVARVCEIRAMPTFQFFKNKAKIDFFSSADAAKLEEYIKRHKGPDGDEESAGVPGYMALDEFVDKRQVECLNADDKHGVQNVFSKESQYLESDCDEQLIISIPFNQAVKVHSVRFISPTDGRAPKNVRIFVNRTSSLDFDEADSAPSVQDIVVENDKIIPLKFVKFQNVNQITFFIKDNEGGAATTAIQQIIVIGIPLAHTNMREFKRVAGHENEAH* # ORIGINAL: g4691.t1 original gene structure, not modified by PASA NODE_741_length_18238_cov_42.562 AUGUSTUS gene 5809 15810 . + . ID=g4691;Name=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS mRNA 5809 15810 . + . ID=g4691.t1;Parent=g4691;Name=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 5809 5917 . + . ID=g4691.t1.exon1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 5809 5917 . + 0 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 6143 6433 . + . ID=g4691.t1.exon2;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 6143 6433 . + 2 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 6788 6879 . + . ID=g4691.t1.exon3;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 6788 6879 . + 2 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 7052 8949 . + . ID=g4691.t1.exon4;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 7052 8949 . + 0 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 9109 9276 . + . ID=g4691.t1.exon5;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 9109 9276 . + 1 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 9434 9545 . + . ID=g4691.t1.exon6;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 9434 9545 . + 1 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 9685 10200 . + . ID=g4691.t1.exon7;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 9685 10200 . + 0 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 10456 15297 . + . ID=g4691.t1.exon8;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 10456 15297 . + 0 ID=cds.g4691.t1;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS exon 15514 15810 . + . ID=g4691.t1.exon9;Parent=g4691.t1 NODE_741_length_18238_cov_42.562 AUGUSTUS CDS 15514 15810 . + 0 ID=cds.g4691.t1;Parent=g4691.t1 #PROT g4691.t1 g4691 MDGASLDELLVGGTADATQYTTILRGLFARYISPAKVEAGCGNEARMTLMWVRSLCHNNVLDVFAAGDPSRFDVDAGPAVSVHWALGQLMRLLISPGCAEVHNLACELVALLMVHVTPDAMPSLLDETCRVLMDCAEFTLLASSSKIILPQSVCVDFAVWMAGKDHATSGLLVDISAATSRLCVMRSAALVAANSISLLPQPHGAAGGSLLSSLGTLVAQLYPSLSAIECLLPAVVVLLRSQGHASDGAACALLPPLIDAAARWDQMPTQMQQLVGEVLRLLAAEGVSGSFISRLPIDTCLARVFPSVVGAAAGASPHPSLRRGVASFATCQVLRSAVALPSPHFSFEVLSSEDVRPEVLRWLQYWTTAAKRTHSSRAKRARRDLSPAGDDHRESHSPTSAAISVFLESARAACAKADMRPLSPLLAIAISRALVTVSQGLCVVQSVASVGDVVDIAMSSCRSWVRCMVAGPQSTYAVVVEGMAAVALLPIPELLSDCLLFVAGAPFVSADSFGAGTEMTPDQVGAEHATLQASFLELCSDLIPSGPAFSLPAPSPAAIDRETLSLCLAVVAQIPGNARGSFREFIFRRAIAASQPDVRMAALVWHPMLARQLGSMCLSVSHAAVASKHEDVILEAFRSIGRLACAFAQSLPDALDAAVDEHYSCCWANVSEERAAHLRHASCGVHEAWELSCSVCIAETTAPGSSTAAHVPDAIANALADDAVACLHVASASARAPESVAVYLSSLVRLSRHLSDKTNLLHRVARLSSMGGEGSSLLGALLTWIGCEDARIRGFAGDVLVECLSGVRASLSQEEFERLYPPVSDRLRRLLSPTTADIGVCQSALKLVGALGRRACSAPDSEGLWQAVLVLLIEFMRHENSLFRSLAVEEIRSIAKTRAVSVATLLSPRDGIVAHCVVEGMRSGRLFLDSLQPMVGARWKQFLAAVQQFALPQIVAMFDVGLLTVLADIVGVEVSRLVEMHFGSIFAAISLDADADKAEAQKRIAFLCGVVKSQVDPDLPTQDEVKNTHIVSIVRELLVHVVPREVGDMSQPDASQDGLHRKRIDARSVLENICDLQGVVEEHFLGIIHGYNLTIAKEAADVAERRQAMNGLVVAMEIVGSKSLFAVRPKVMAMLRLGLEDPSLASLAVWGWAVFIRRIDPRRLGALVAQLVVTLSPAAQAFPREIAAIFSYLFVENANIVGRHIHEVHTIPAGDDFVPIAAALARLLAGKQWSVQDRLRHRLAGISHEHLGVRISELRRLKALLCEERVLITDLVCSRDNVDDDVTALAHALIMGCRDADPVARRLMVECIGELGAVDPGRILTTVRRRGDARDRDRGMGAHRRAPELPSMTSPGFAKALISEHLIKALLSAKTDDQDLAAVAIQQMLQIAGAAGGAGSGASMDDCLTQGTATDKLKQLGFDDDDSILIMPFLSSGYKLQTNPLVLRRPIYRTAASFQQWLSDWTVDLGLQLGKPEGRPGARGDRAMEVFTACRGVVRTNADVALALLPQALFHTVTQEDCEVVAYAADEISAIIDDAVLAYDADGGDAAVSTSDDARADSRTDSGAGVGAGAGGDTAGKERASMRQMCCQAIFAAVDYLLRFERKQLTETARPETAAPQQSQAQQQRAARVRDRAQLPPRDPRLHHVTRFIDSLALDKLAVAAHASDAHARALLYLETHYRRMCSRTDVATDHDTVLQSQLPLMQRAFAAMDEPDGMAGVAARRKTTTLRDAILDHECSGDWASALSCREQALRLNPENFAHQTGLLNCLLNLGHLETMLMHATGLAVSRGENEAAVAPLRARAAWRLGRWDALDECVGGSLDGAVVSRDTALACAVPFSARDSAAHIARTAMARDFEVSLGRILLRARSRDAAGLRLELAATRDALVVPLSAASMEAGAYQRGYPSIVRLHMLRELEHGLAPALSGGAVAVDGAHGITTMNAAGGGMGDWDPALRLTQPSYRAREPILNLRRIILSLVAEGGRAAGTRGIDAGAGGFGAANGDLWLQSARTARKSGLFQVAYGAMLNAAALGAPPAAVAVERAKILWERGDGHEALAFLQNELVSKKDVVHSIIRTNFKSSKKSDLAPLVMLNHYLTLQPPQQLTPDADELAKTVLLAGRWMEMTGQSLSNDIIAQYRRVVELCPRWEKGFFHLGKYYDRILQSDGQSDTKALDVRTMACLPHICVNYGLALAHGCHYIYQALPRILTLWLDYGARFPDLDAAGKKLKSSERASEKDKAGDLLGTLNAIVKILAERLPPYQFLTALPQLLSRLCHQNTAVSEIIQDIIRRSLVEYPQQTLWGLMFSHKSKNTFRQRRCAEIFGAVRSQNGSLRETSNRFIDLANILTDVCDVNVDGRQDLSVSGDFRPLNRMMPLDVIIPLERSLHVRLPSYPHDTASFPETMPTFQELRDKIELLSSMQKPRKLVILGSDGVEYPVLCKPKDDLRRDARMMEFFHMVNRLLKRDAESRKRQLNIRTYGVVPFNEECGLLEWVPHTMPIRPIIYQLYDARGVDYSTNNVKQLHGAVGIAGTEKGKANARPTETVAAVGALAAGHTRVKAFVSRVLPKFPAVFYEWFLSTFPEPSSWYSSRVAYCRTAAVMSMVGQAVGLGDRHGENILMDAGTGECVHVDFNCIFFKGELFAVQEVVPFRLTHNMTDAMGPTGVEGIFRKTCEVTLGVMRRERESLVAVLETFIHDPLVEWGAEGRSVRETNGDPRNPKAVEMMVRIDNRLQGKHSSGLPLSIEGQVHQLISEAVAPEKLCEMFIGWGPFL* # PASA_UPDATE: g4690.t1, single gene model update, valid-1, status:[pasa:asmbl_9140,status:13],[pasa:asmbl_9141,status:12], valid-1 NODE_741_length_18238_cov_42.562 . gene 3742 5345 . - . ID=g4690;Name=g4690.t1 NODE_741_length_18238_cov_42.562 . mRNA 3742 5345 . - . ID=g4690.t1;Parent=g4690;Name=g4690.t1 NODE_741_length_18238_cov_42.562 . exon 5216 5345 . - . ID=g4690.t1.exon1;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . CDS 5216 5345 . - 0 ID=cds.g4690.t1;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . exon 4821 4959 . - . ID=g4690.t1.exon2;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . CDS 4821 4959 . - 2 ID=cds.g4690.t1;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . exon 4635 4647 . - . ID=g4690.t1.exon3;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . CDS 4635 4647 . - 1 ID=cds.g4690.t1;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . exon 3742 4466 . - . ID=g4690.t1.exon4;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . CDS 4065 4466 . - 0 ID=cds.g4690.t1;Parent=g4690.t1 NODE_741_length_18238_cov_42.562 . three_prime_UTR 3742 4064 . - . ID=g4690.t1.utr3p1;Parent=g4690.t1 #PROT g4690.t1 g4690 MSEWVVCRTRRPSARVRLVCLPWAGGGTGFYSALSAKIDDSIEVVSVCLPGREARFKQQPYTNLQQCTRDMANALMSMLTEKPFILLGHRAGPRAQSLLPNLTNASRDEFVAHLRTLNGTPTEILDDPDLLDLFLPAIRGDFEMVQSHEGSPLANDKLSGVPITCLAGTDDHHGNRELVSWGELTTGPFRVVSLPGNHFFIAAKDNERPLLDIISQTAARVYPVSGF* # ORIGINAL: g3075.t1 original gene structure, not modified by PASA NODE_9202_length_340_cov_95.4792_potentialcontaminant AUGUSTUS gene 1 223 . - . ID=g3075;Name=g3075.t1 NODE_9202_length_340_cov_95.4792_potentialcontaminant AUGUSTUS mRNA 1 223 . - . ID=g3075.t1;Parent=g3075;Name=g3075.t1 NODE_9202_length_340_cov_95.4792_potentialcontaminant AUGUSTUS exon 1 223 . - . ID=g3075.t1.exon1;Parent=g3075.t1 NODE_9202_length_340_cov_95.4792_potentialcontaminant AUGUSTUS CDS 1 223 . - 0 ID=cds.g3075.t1;Parent=g3075.t1 #PROT g3075.t1 g3075 MNNDRLQSVPSFPALVNVVRIQIESNPKLNRVDGFPVLTRIGPDWSIAPSNRLAEQCSYALYDGGSQALRIASN # PASA_UPDATE: g12331.t1, single gene model update, valid-1, status:[pasa:asmbl_7591,status:12], valid-1 NODE_4764_length_1265_cov_28.1538 . gene 215 1109 . + . ID=g12331;Name=g12331.t1 NODE_4764_length_1265_cov_28.1538 . mRNA 215 1109 . + . ID=g12331.t1;Parent=g12331;Name=g12331.t1 NODE_4764_length_1265_cov_28.1538 . five_prime_UTR 215 244 . + . ID=g12331.t1.utr5p1;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . exon 215 329 . + . ID=g12331.t1.exon1;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . CDS 245 329 . + 0 ID=cds.g12331.t1;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . exon 636 768 . + . ID=g12331.t1.exon2;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . CDS 636 768 . + 2 ID=cds.g12331.t1;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . exon 1025 1109 . + . ID=g12331.t1.exon3;Parent=g12331.t1 NODE_4764_length_1265_cov_28.1538 . CDS 1025 1109 . + 1 ID=cds.g12331.t1;Parent=g12331.t1 #PROT g12331.t1 g12331 MEAVVETARVFGNFSRRKEVRTLLFSHRIDELMVVLLDHGSREVVFTVCGVLMNLMADAQHRSRLREGDGVQKLVDVLGHFGREDWLLASMVCKTLYNYG* # ORIGINAL: g1734.t1 original gene structure, not modified by PASA NODE_3789_length_2755_cov_40.2119 AUGUSTUS gene 146 838 . - . ID=g1734;Name=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS mRNA 146 838 . - . ID=g1734.t1;Parent=g1734;Name=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 756 838 . - . ID=g1734.t1.exon1;Parent=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 756 838 . - 0 ID=cds.g1734.t1;Parent=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 431 491 . - . ID=g1734.t1.exon2;Parent=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 431 491 . - 1 ID=cds.g1734.t1;Parent=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 146 283 . - . ID=g1734.t1.exon3;Parent=g1734.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 146 283 . - 0 ID=cds.g1734.t1;Parent=g1734.t1 #PROT g1734.t1 g1734 MPLAPLTFDECVGDTPSFRQQLGRFEASFDLISQNLKAFTRVAQTLVDTETAASNCAVEFSETVSKFASDSIADDGVLEASQGEAILEFAAAVQ # ORIGINAL: g1735.t1 original gene structure, not modified by PASA NODE_3789_length_2755_cov_40.2119 AUGUSTUS gene 1286 2674 . + . ID=g1735;Name=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS mRNA 1286 2674 . + . ID=g1735.t1;Parent=g1735;Name=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 1286 1386 . + . ID=g1735.t1.exon1;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 1286 1386 . + 0 ID=cds.g1735.t1;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 1582 1748 . + . ID=g1735.t1.exon2;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 1582 1748 . + 1 ID=cds.g1735.t1;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 1959 2245 . + . ID=g1735.t1.exon3;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 1959 2245 . + 2 ID=cds.g1735.t1;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS exon 2483 2674 . + . ID=g1735.t1.exon4;Parent=g1735.t1 NODE_3789_length_2755_cov_40.2119 AUGUSTUS CDS 2483 2674 . + 0 ID=cds.g1735.t1;Parent=g1735.t1 #PROT g1735.t1 g1735 MADLLVVRNLIARNTIGVERWEREKKQNIRINLWLYTDATKSGASDSLSDSYHYGNVAKSVVDFAETSSFKTVEGLAHGICELAIKEFGVHKLTVRVEKPSALLFAASAGVEITRSRESLGSAVSHSSDKIMINDLLVRCIVGVNPWEREEKQSVVVGLVLWLDVEAAAESDRVTPKGNYRTVSKAVVASVEASAFKTVEALATEIARVCVVDCGVREVTVSLQKPSALVFAESAGIEITRNRTHFAK* # ORIGINAL: g6753.t1 original gene structure, not modified by PASA NODE_1781_length_9290_cov_40.674 AUGUSTUS gene 146 4936 . + . ID=g6753;Name=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS mRNA 146 4936 . + . ID=g6753.t1;Parent=g6753;Name=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS exon 146 397 . + . ID=g6753.t1.exon1;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS CDS 146 397 . + 0 ID=cds.g6753.t1;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS exon 648 3378 . + . ID=g6753.t1.exon2;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS CDS 648 3378 . + 0 ID=cds.g6753.t1;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS exon 3584 3923 . + . ID=g6753.t1.exon3;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS CDS 3584 3923 . + 2 ID=cds.g6753.t1;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS exon 4313 4422 . + . ID=g6753.t1.exon4;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS CDS 4313 4422 . + 1 ID=cds.g6753.t1;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS exon 4698 4936 . + . ID=g6753.t1.exon5;Parent=g6753.t1 NODE_1781_length_9290_cov_40.674 AUGUSTUS CDS 4698 4936 . + 2 ID=cds.g6753.t1;Parent=g6753.t1 #PROT g6753.t1 g6753 TLCSDCEPALKSRTLTALQEHASLLFTDATRLEHAFASLQTMLTTSLYENFGVPTSSQASGGDAMVGAAASVANAGYARVFGSQVLVTLTTMLLDLDVFDSHSRIALGFVDFLLEIAAARLPTDATDPVVRSTACECLREMELSRPGMLGSKTGALLSVAQDETTLAVQSYATLFCLALRNRAWEAVASLESAASPAPGEAAILLTSEPLRPYIIGGSHAKGGGEHIAGRSAADSSFQNPPSLPASLVRGVAGSVATSALSNLAQSHGGGMPASASASLSGVSATGATLAAQRGEASSFNRSESFYGGGRIESRTDSVKSDVSAGAVSSMSTSWLVEALRRDIRRAVTIICDLLCRLSPYGVAVCASLCAECVRMVGMAPRMFKPLFLKSVTSMSAVVFHAMARLRDLSPDAFDAADDTLIMDHAVGLASDPLLPREIAKLVVAWLSLLPSVNEVPGKDARHRLLRARYADLFPSPFDDAYLKGAKLVTLARCFPASTGGRPLLDGLDALHEHKYHPLRGAPVIALFRTIYAYHEYGGASLDDAIASYLVSMRDEQPRLTAGVIALVGAIGARDPSSKVRSIVLGACATRLAGSTPEEVLAYLPETLLVVKSLALLPSIRPAPFIALLHALLMSDVDARVRTTWQHGDTLLAICKDFVSVHVAGVIPDGTAPPPSSRQRQFKEDAQVVYSLSQLLLMLASRHGHPEIRDRARFYAALLRDARGESLRRALALGGGSRDSASAGTASTAATDGKDVIAGGDDNLGVSSGSAVTSKWPQSRGQTPEILGDGGANARSATFTPVSAVATGDGKAQGTLADPAASISATTSLSGAWAARGSLGRIRNPLPIDDGFVVVNKVRMVPTAVHPCHLVSNNTAMPAWHVVAEVNVELCTQGPTGVRQGLWQSTAPVSSPLLLQQHAPTDGLVRSPSDPPSRDSNFGPRGSNTSSGSVPSDGRGWPVLHGLSLQFKCPQGHYGPPEEAIVPYIVGYTGAGDTPRTFPYQHSSLVEFHPLAPFPASIEVTASFSDTEARTFAGRLAPLQISFADLFLPVDLAKLADVTPDNNSNSGNTGRTNTDDSSNGNSGPGGVVAVGMTEDDFFVRLWRQTSEDSGPNCAETVKCISAPASVIRHIVSIGLRRYRIGRTQTTVVSVPAAQGSRRMSESQQFLDARAIVCLPPRVRVLMRVASSPAGATIRARTDDWRVLCHLDAFFASLHQEAVRAVGIS* # PASA_UPDATE: g6754.t1, single gene model update, valid-1, status:[pasa:asmbl_2606,status:12], valid-1 NODE_1781_length_9290_cov_40.674 . gene 5306 9157 . - . ID=g6754;Name=g6754.t1 NODE_1781_length_9290_cov_40.674 . mRNA 5306 9157 . - . ID=g6754.t1;Parent=g6754;Name=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 9143 9157 . - . ID=g6754.t1.exon1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 9143 9157 . - 0 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 8898 8996 . - . ID=g6754.t1.exon2;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 8898 8996 . - 0 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 8518 8620 . - . ID=g6754.t1.exon3;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 8518 8620 . - 0 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 8276 8327 . - . ID=g6754.t1.exon4;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 8276 8327 . - 2 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 7987 8061 . - . ID=g6754.t1.exon5;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 7987 8061 . - 1 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 7561 7625 . - . ID=g6754.t1.exon6;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 7561 7625 . - 1 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 6842 7189 . - . ID=g6754.t1.exon7;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 6842 7189 . - 2 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . exon 5306 6487 . - . ID=g6754.t1.exon8;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . CDS 6024 6487 . - 2 ID=cds.g6754.t1;Parent=g6754.t1 NODE_1781_length_9290_cov_40.674 . three_prime_UTR 5306 6023 . - . ID=g6754.t1.utr3p1;Parent=g6754.t1 #PROT g6754.t1 g6754 MECLALNKEFDREGLTVYNFTGGEENVYSRSGNGTTDPLPNVPLAVVSSTDKYELPNGRVVPGRKYKWGVVEVFNENHSDFAKLRRLLLGQHFQRLKDITHEVHYEAYRQVHRNRLALHFENKIKAKLKQRISAMRDDVSTNLAASASLTSMSALPSSLAPTQEVHSRTSSESLNAATQESPHLMPQQKQHQRSPSRETSPAPTPTKPAGSPSVERRSVHFSVADDRRKSPEVGRRGMAESVRAAYEEGGDGSAIAAAIAAAHAGQDPASAAAAAAATLAEDFRGRTDTSTRAELAKAMLQQKYQTIGAMTKTGHQYNPLADRRKAMMDRRSLANVGFAPAGAPAAGSPPTVPRGDLSPSTPRADVSSSDEGGAGGGGGGGERIVVVERGGGPPGGPGVNGASSLV* # PASA_UPDATE: g683.t1, single gene model update, valid-1, status:[pasa:asmbl_7765,status:12], valid-1 NODE_4999_length_1090_cov_28.8611 . gene 79 1025 . + . ID=g683;Name=g683.t1 NODE_4999_length_1090_cov_28.8611 . mRNA 79 1025 . + . ID=g683.t1;Parent=g683;Name=g683.t1 NODE_4999_length_1090_cov_28.8611 . exon 79 237 . + . ID=g683.t1.exon1;Parent=g683.t1 NODE_4999_length_1090_cov_28.8611 . CDS 79 237 . + 0 ID=cds.g683.t1;Parent=g683.t1;5_prime_partial=true NODE_4999_length_1090_cov_28.8611 . exon 566 1025 . + . ID=g683.t1.exon2;Parent=g683.t1 NODE_4999_length_1090_cov_28.8611 . CDS 566 946 . + 0 ID=cds.g683.t1;Parent=g683.t1 NODE_4999_length_1090_cov_28.8611 . three_prime_UTR 947 1025 . + . ID=g683.t1.utr3p1;Parent=g683.t1 #PROT g683.t1 g683 DGERERCYNSVTLVDPRGVIVITYDKAFLYEVDERWADEGSGFVTTTLPRIGTVGLGICMDLNPYQFKAAFEDYEFANFHRKSGTRLILFSAAWLDDATDSEDVRVIPNYWAARMRPLIGKDVLFVGCNRTGVEGETTFGGCSCVISMREPALLCQMNKRQENVILAQVELPPARPGEP* # ORIGINAL: g2838.t1 original gene structure, not modified by PASA NODE_6508_length_558_cov_25.4472_potentialcontaminant AUGUSTUS gene 218 530 . - . ID=g2838;Name=g2838.t1 NODE_6508_length_558_cov_25.4472_potentialcontaminant AUGUSTUS mRNA 218 530 . - . ID=g2838.t1;Parent=g2838;Name=g2838.t1 NODE_6508_length_558_cov_25.4472_potentialcontaminant AUGUSTUS exon 218 530 . - . ID=g2838.t1.exon1;Parent=g2838.t1 NODE_6508_length_558_cov_25.4472_potentialcontaminant AUGUSTUS CDS 218 530 . - 0 ID=cds.g2838.t1;Parent=g2838.t1 #PROT g2838.t1 g2838 MELLAHLSTSREFGDAIEQQGGLTLELAFIQQKPKDDCVVNYGIDTIASLAHNPECCAAMIACGMIRTVVIRMDAIMGRKRDVDILSVAPSIHGGSFARRCRFN # ORIGINAL: g7141.t1 original gene structure, not modified by PASA NODE_1086_length_14058_cov_40.3634 AUGUSTUS gene 76 6808 . - . ID=g7141;Name=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS mRNA 76 6808 . - . ID=g7141.t1;Parent=g7141;Name=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 1106 6808 . - . ID=g7141.t1.exon1;Parent=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 1106 6808 . - 0 ID=cds.g7141.t1;Parent=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 496 543 . - . ID=g7141.t1.exon2;Parent=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 496 543 . - 0 ID=cds.g7141.t1;Parent=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 76 312 . - . ID=g7141.t1.exon3;Parent=g7141.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 76 312 . - 0 ID=cds.g7141.t1;Parent=g7141.t1 #PROT g7141.t1 g7141 MVVNLILRPSTPRSLGLFASVFGAVFVAFLIQCAVATDDLRLGESFATLRQFWETISGETGGADNIFSQRNSDGLERIFSQPEERLQSEGYTNGPARHNTHSSHLDRRNEATDADTSDIVLHLNWTTTDVASAGSLAQRLSLLASDDEFRSLASLYNMALEANASFRFEYVISLSVGRYLLSPLASGDAASVPFIVNLAPARVRIVPAQAAEGTATASGDPNTSGLVEMLGCTSAGIAHGLVFARPLALDGGDLAFVNVSFLRASASDGCQPNPTHSDIVRVGRGFVRVPDNFGNASHADATATQPSKCDPSDCACVSANIGVNMSGSAQLRPWSVPLRAILVRNPATTLRLERAAVSGLAGLLDVSGGGTARVIDSTFTFIDTTSLGGGGTNPLFLQPTYVLVESASARVDQFFRDTANERVTCETANSRKLSLVEFVRPASQSGAGVVAMVRSGGVLVFESSVFSDIGHKPFSFDEEMASYWANPQPGGSLVYVGPQSSLEMHGCSLSNVHMRPALSLPGCTLDLCFGWLNLTGSPGHLASIVEASGLERAFILDEESLLEAAAGNWSSILPVDLSYARAGACDAVGAAIVTVSDLVVTDVTARSVLLIDSGAYASVTEVRMERVAASLVRAQAVFDADALLVNSWNTFMTSADLTSVHVTRSLYPPLWATANLLWSRLGSLVDDFFFLFYVQYLANIVQIRVLHSSFEDIAPSPLYHPMRDIGLVQSDYAGRPWIPTSGAATDDLRANLPITLFACDLVGPSIPTGGSGRAVLGGTPPAVAVTTSIGASILIFSSVVSNIQNASVARVCGGSFVAGESVFFNIGDRTRVTLGQLAYLQFPREGTTVGLGLFAVVKIEKCKLSRFGIGTAVVSSSYDTSNPLTTRGDIRFAFVQFLSIWSGIRITDSIFEDFVVTTACPALALVGQGSGGMKISGSDFRRFQPGSLAQVTTKSGLDANVALVLDLASGPAGRSLIYAFSHVIVETSVFRDMTFGVDSVLADGSTLRSPTIGAIARIGAENLSAPNRKGFIVRGFAVITSVCAEGPEFSFSEDIAPYLIICMNTLETASLTMSNTLITNITDAAGLFLAGSSSVVSLDGVNIASITLTGAAVAYADPKAAILMKNIIVENVTVVLPNPTPALIDTHNGGPQPVPILPPLCGGVVVVPVQSAFPSTVVKDFVRASRPSGVDAGLSSSRFTSMTGASVLHRVAMEGGGSAWVVAASTDYPGLFSITPHPFYGGFGYRPTESKYSLHVEGGDFGNVTSGGSILLRASARYLQTVTVDVTDFTLTDVSAGGTGGLLSFNSVAAAVTLHRSTFTAVRCAQGGGVVFTSGALTMDVVNASFVDISSGASGGILQSVAAVGGDFASAVNIAAASFINISSALSGGLFSAVDSTVLVVQDAIVLSAKSEESGGLANMGGISTLHLQNVTMNDIAAKGNGGIVHLSGNAVVSISESSVSSIRAVGSGGCIFAAEQSSLSVTATSFSRVAALADGGFLYASGTARATVSNVAVGGSSAGADGGCFYVGISSVLQLRDSVFDGCTAGTRADSYGTGGLAVIASPIGVGVGGWLNVHSSNSTAPIAPGVYLLDESLAPLFSGLTGSTAAMSVEGRRRRSPSANGLIATRPCTVRAFFTGVGPSGVDAATRSASVRPGDYVPSLGIELRDCLGNLIAAPPSQLIVVKVSLHSGSASHISAESGTGVVGTTTIPLLDARPVTVPSGTLRAHGQPGVHTLRFSSGNLLHTADGLFDNATLSLNLDECLPGMHLDNSTTDGLRSCVADAVPASGSDDITVKVVPAVVICNIILVVCIGLVVRWQLRKFRRKQSREAHERFRAKNAGLLTGLEDFEIPRDSLEILEEVGGGEFGVVHRARVVAGDGRMRVCAAKLLKEGAAYEERVKFIAEGDVMRTLKHPNVVALWAVLTVSEPVVLCLEFVSLGDIRTFVRSISAARRLHHTTASMLSSFAEQIAAGMAYLVQMRVVHKDLAARNVLLNQ # PASA_UPDATE: g7142.t1, single gene model update, valid-1, status:[pasa:asmbl_326,status:3], valid-1 NODE_1086_length_14058_cov_40.3634 . gene 8731 11537 . + . ID=g7142;Name=g7142.t1 NODE_1086_length_14058_cov_40.3634 . mRNA 8731 11537 . + . ID=g7142.t1;Parent=g7142;Name=g7142.t1 NODE_1086_length_14058_cov_40.3634 . five_prime_UTR 8731 9457 . + . ID=g7142.t1.utr5p1;Parent=g7142.t1 NODE_1086_length_14058_cov_40.3634 . exon 8731 11537 . + . ID=g7142.t1.exon1;Parent=g7142.t1 NODE_1086_length_14058_cov_40.3634 . CDS 9458 11116 . + 0 ID=cds.g7142.t1;Parent=g7142.t1 NODE_1086_length_14058_cov_40.3634 . three_prime_UTR 11117 11537 . + . ID=g7142.t1.utr3p1;Parent=g7142.t1 #PROT g7142.t1 g7142 MAERYSSGFVEQRWSLHTSPKQRPLSPTRSQKRPNRIISITDVNDDAICDSQRGSASATVACTSRISSSCIATHQHAFTTVASSSSQSVLYGASSLPSRPPPAYLRQSSSPPCNPDIAAAVSPRKHPNQLDLLIREPVDIPKDCSAKISPPPQRSKIPLASSRIQALKADVSSNSIDIDHEKKQKPTQEAEVTMPSKKCNATGTGVSTIRNPMAYEDDDYSEDDDLGLHRRIEELRWDFSAVDDPEPPARGTPPRPECGSLADLRKHRRPLMSSGGLFNPFLNSWLLAGQESRVARTVARHDAVSRLRGESKHMQVQATEDERRAYEAALTLQLEKEAREREVIAEHLKWLRSVPIQLFAKLALAQDRYELTHKEGTHASVLVSAKKTSASDATLSCAKANAACATETLSVVCPASASASASMPSSSEAHQRCDSPTVFDVAEKGLFSDCVPGKTLTSQLSHISEEGESESEGVPPTSPVMSPQGDADGIDICDLAHSPSRMHCGFSPKSDVWGIEDIVAEIDHPHLTVPYSMHGRYSYGRADSFTRLETGC* # ORIGINAL: g7143.t1 original gene structure, not modified by PASA NODE_1086_length_14058_cov_40.3634 AUGUSTUS gene 11538 12263 . - . ID=g7143;Name=g7143.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS mRNA 11538 12263 . - . ID=g7143.t1;Parent=g7143;Name=g7143.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 11538 12263 . - . ID=g7143.t1.exon1;Parent=g7143.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 11538 12263 . - 0 ID=cds.g7143.t1;Parent=g7143.t1 #PROT g7143.t1 g7143 MDSIPDHSRLHVVWSFSKDFSISGFRVGVVHTRNPELSDVLGQMSYFTGVSIPTQHLLRNALRDTEWVDRYTATMHTRLKEGASIVTNALDAIHAPYVRPSAGFFIWTDLGRFLPSRTVDNELSLWRRLIEAGLYIAPGEAFHCVQPGWFRIVFADNKDVMGTAMLRLMLFLDKEASGLSASNAHTGHEAAGSILPGDRLSEEEKLSTGGTSEPSLEDLVSLLKGQIRTSDWLQSSGDVPK* # ORIGINAL: g7144.t1 original gene structure, not modified by PASA NODE_1086_length_14058_cov_40.3634 AUGUSTUS gene 12933 13933 . - . ID=g7144;Name=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS mRNA 12933 13933 . - . ID=g7144.t1;Parent=g7144;Name=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 13842 13933 . - . ID=g7144.t1.exon1;Parent=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 13842 13933 . - 0 ID=cds.g7144.t1;Parent=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 13520 13607 . - . ID=g7144.t1.exon2;Parent=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 13520 13607 . - 1 ID=cds.g7144.t1;Parent=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS exon 12933 13316 . - . ID=g7144.t1.exon3;Parent=g7144.t1 NODE_1086_length_14058_cov_40.3634 AUGUSTUS CDS 12933 13316 . - 0 ID=cds.g7144.t1;Parent=g7144.t1 #PROT g7144.t1 g7144 MLAGNETLSARGASMRGDSTLLFTGYILAQKNPYSNENPGGCINLGTSENKLMFDLLSEKFNDASCRHVEESSTMYGDHTGVVTFRDEIAGLFNRTMHPKQPVAASELCVMTGAGTVVEALAFSLCDAGDGILIPTPYYGGFDMDLNKRAGVIPCPVDTTPETNFALTDDALEGGWNAAVAKGIRQV* # ORIGINAL: g12389.t1 original gene structure, not modified by PASA NODE_2762_length_5198_cov_51.926 AUGUSTUS gene 3713 5121 . + . ID=g12389;Name=g12389.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS mRNA 3713 5121 . + . ID=g12389.t1;Parent=g12389;Name=g12389.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 3713 3883 . + . ID=g12389.t1.exon1;Parent=g12389.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 3713 3883 . + 0 ID=cds.g12389.t1;Parent=g12389.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 4112 5121 . + . ID=g12389.t1.exon2;Parent=g12389.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 4112 5121 . + 0 ID=cds.g12389.t1;Parent=g12389.t1 #PROT g12389.t1 g12389 MASGYGGAYDDGRRGFEGSVSVYEDSVDDYREVLRRFFAALGAFDFNTASSVVKDNARPAKDRRASYQQTPYYQFLAALGQLVGAESSYVNLAFLRHKWYRKNPGQLAYAAILDELKRIEDANDQSWLEASGESRLVLPLCQQVAALVRARQVSMNIYVNIAAMTISAPRQYETVLAVVDGQIDDTQGDFNHPLLAPVKSCYLTELSILQGLLRAQIAITEFAFKDATLQLFAARSALDGWRLSRSHVPVIAERSPARSKVTGASGAGGAGLPMVLTWQGRFLSSLLSKYALYFHGILERVHGGSEMRTLCGKLDMDHVAAMRAFHRKTDAVAVCVVFSTDGIVFRPSGYATPDTPYEPPVGLGSFPAVFCHPDAPRPIAHWPNIVSIIADNS # ORIGINAL: g12388.t1 original gene structure, not modified by PASA NODE_2762_length_5198_cov_51.926 AUGUSTUS gene 118 2312 . + . ID=g12388;Name=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS mRNA 118 2312 . + . ID=g12388.t1;Parent=g12388;Name=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 118 282 . + . ID=g12388.t1.exon1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 118 282 . + 0 ID=cds.g12388.t1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 580 732 . + . ID=g12388.t1.exon2;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 580 732 . + 0 ID=cds.g12388.t1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 949 1110 . + . ID=g12388.t1.exon3;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 949 1110 . + 0 ID=cds.g12388.t1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 1513 1703 . + . ID=g12388.t1.exon4;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 1513 1703 . + 0 ID=cds.g12388.t1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 1894 1962 . + . ID=g12388.t1.exon5;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 1894 1962 . + 1 ID=cds.g12388.t1;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS exon 2147 2312 . + . ID=g12388.t1.exon6;Parent=g12388.t1 NODE_2762_length_5198_cov_51.926 AUGUSTUS CDS 2147 2312 . + 1 ID=cds.g12388.t1;Parent=g12388.t1 #PROT g12388.t1 g12388 WNQAVDLAKQHNIKEIDSLLAKYASHLLEKKKTLNAIELYRKANHFVEAARLLFQLAQESATAKASPLRCKKLYVLAALQVEKHHEHYKMTSHAKNVAKGDKKASSTKSALDGLLAEDATAAGGGGRSLDNAWRGAEAFHFFLLAQRQLHNGYIDAAMKTALLLCDYEDILDPTDIYSLIGLAAYANKSFAVCSRAFIKLESMEKLGEEDRQQYEQLALDIFTKNPPKDSRGGKIECTNCDTMIPDWNRTCPNCDTKFNSCIVSGAPLLELHTWMCKTCKHRAYDQEISGMANCPLCHTSI* # PASA_UPDATE: g849.t1, single gene model update, valid-1, status:[pasa:asmbl_5830,status:12], valid-1 NODE_3283_length_3838_cov_36.1044 . gene 27 2027 . + . ID=g849;Name=g849.t1 NODE_3283_length_3838_cov_36.1044 . mRNA 27 2027 . + . ID=g849.t1;Parent=g849;Name=g849.t1 NODE_3283_length_3838_cov_36.1044 . five_prime_UTR 27 74 . + . ID=g849.t1.utr5p1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . exon 27 187 . + . ID=g849.t1.exon1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . CDS 75 187 . + 0 ID=cds.g849.t1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . exon 421 717 . + . ID=g849.t1.exon2;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . CDS 421 717 . + 1 ID=cds.g849.t1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . exon 923 1125 . + . ID=g849.t1.exon3;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . CDS 923 1125 . + 1 ID=cds.g849.t1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . exon 1307 2027 . + . ID=g849.t1.exon4;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . CDS 1307 1902 . + 2 ID=cds.g849.t1;Parent=g849.t1 NODE_3283_length_3838_cov_36.1044 . three_prime_UTR 1903 2027 . + . ID=g849.t1.utr3p1;Parent=g849.t1 #PROT g849.t1 g849 MRGYDIKTWTEIEALLRQGRRLPQPKNCPSTVYNIMRRCFRFQDAARPSFTLLSGLLCDAAGQALAAVKDPSGTLPRDAYSSESALRLLSLYHESYLQHVRYDMDLRQVSAPWVVAVLPVPTNKMEAWSIANYADWSYGVYPICQSLFESPHVVPKAIAVFNVEPRAVGAPTSSQQQMPSWLTSMRPHLQLGLATLAVANVVNTVEEILDVDCYGLDPTPVPVPTRTPEWSVTHAIHISAALLAISTGFHTAYRIRKTCDKLPYDHRTSEFAQELRDSRTAKGAKAWWTQCQPSPADWEMRRLGTQRICLCPTHKKTLLSLHLVPEDDAPTLYAANKSQAPGLHVGAMRGRAQSAARMIGKPRTLSAAAAGDGEQKDDPYAAPQDGSSAVQLELDRAAYSHA* # PASA_UPDATE: g7754.t1, single gene model update, valid-1, status:[pasa:asmbl_4301,status:12], valid-1 NODE_2430_length_6307_cov_34.4838 . gene 94 2615 . + . ID=g7754;Name=g7754.t1 NODE_2430_length_6307_cov_34.4838 . mRNA 94 2615 . + . ID=g7754.t1;Parent=g7754;Name=g7754.t1 NODE_2430_length_6307_cov_34.4838 . exon 94 756 . + . ID=g7754.t1.exon1;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . CDS 94 756 . + 0 ID=cds.g7754.t1;Parent=g7754.t1;5_prime_partial=true NODE_2430_length_6307_cov_34.4838 . exon 1051 1257 . + . ID=g7754.t1.exon2;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . CDS 1051 1257 . + 0 ID=cds.g7754.t1;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . exon 1503 1580 . + . ID=g7754.t1.exon3;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . CDS 1503 1580 . + 0 ID=cds.g7754.t1;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . exon 1817 1909 . + . ID=g7754.t1.exon4;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . CDS 1817 1909 . + 0 ID=cds.g7754.t1;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . exon 2156 2615 . + . ID=g7754.t1.exon5;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . CDS 2156 2599 . + 0 ID=cds.g7754.t1;Parent=g7754.t1 NODE_2430_length_6307_cov_34.4838 . three_prime_UTR 2600 2615 . + . ID=g7754.t1.utr3p1;Parent=g7754.t1 #PROT g7754.t1 g7754 LNGAFASVICCTDPDCTDLKPRPKQPLLLKKYGGKGAVRGKAGSSARASSSGPSAQEGEGASDSSTAAPIAESGHPDGLVEKKDVPQDQHVSEQSKAEFTDGGVSDAGVVPAANDIVVAEVSQETEIPANDGVAVALTVDCCENVGCVYVGTPRDCPIQKARELNEARKAEAERVLWRKRALFLAIFTIIYNIAEGATGIIFGLDDDSFSLVGFGFDSIIEVSSAFVVLYRLSADFGATPIDKTAVIARERTCARVIGAFLCLLALTALGGAIYRLVLGGEPSTGLPGLLVSVASLSFMFFLYYFKTKAANKLNSMTIRKDALCSLGCIQLSIVLFIGSLVYYLAEKYANTHSTWWLDAVATIFIAILIGKEGIETLRAASRDDFDGGCGCCADAGKSTTTATSSDGSAVRPPRRGVFQRAKARAVRVAATPWRTHRRRRASNASNANSAGVLGVGASGNVAAPAAATAAVQESTAGEGEGGTVDICLTEIAVE* # PASA_UPDATE: g7755.t1, single gene model update, valid-1, status:[pasa:asmbl_4300,status:12],[pasa:asmbl_4302,status:13], valid-1 NODE_2430_length_6307_cov_34.4838 . gene 3038 6147 . - . ID=g7755;Name=g7755.t1 NODE_2430_length_6307_cov_34.4838 . mRNA 3038 6147 . - . ID=g7755.t1;Parent=g7755;Name=g7755.t1 NODE_2430_length_6307_cov_34.4838 . exon 5731 6147 . - . ID=g7755.t1.exon1;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . CDS 5731 6147 . - 0 ID=cds.g7755.t1;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . exon 5383 5487 . - . ID=g7755.t1.exon2;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . CDS 5383 5487 . - 0 ID=cds.g7755.t1;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . exon 4778 4875 . - . ID=g7755.t1.exon3;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . CDS 4778 4875 . - 0 ID=cds.g7755.t1;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . exon 3038 4468 . - . ID=g7755.t1.exon4;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . CDS 4054 4468 . - 1 ID=cds.g7755.t1;Parent=g7755.t1 NODE_2430_length_6307_cov_34.4838 . three_prime_UTR 3038 4053 . - . ID=g7755.t1.utr3p1;Parent=g7755.t1 #PROT g7755.t1 g7755 MAHDYGHPGVNNDFLFRTQDCLSSLYNDTAILENYHTAAALKILALPEHDFLCNLSRDQRMQFRTLVVSMILATNMAEHSAIMTVVNSTIDGKGMDYNLPGHRVLLLRFLIKCCDISNTAKPPHIAKPWSEMITEEFFQQGDAERDAGLKVSPFMDRRTPQPAKCQMSFIKFIVAPMFRDMGKICDVSEPLEHLRQNLQVAIELNKRDHVIRACRTLARLVPLSKLTPEGSLKAWRLDYHARIIQQAMYALWLRRTSLPSPSSSFSSADASVFAFAHTTTSSPTTSSSSSSLPLPRQVRVSGGRPCCRGITVGHECRICGGDPPLSFGALSAVAPSRASPVKRE* # PASA_UPDATE: g12770.t1, single gene model update, valid-1, status:[pasa:asmbl_5073,status:12], valid-1 NODE_2819_length_5062_cov_35.8971 . gene 2635 4676 . - . ID=g12770;Name=g12770.t1 NODE_2819_length_5062_cov_35.8971 . mRNA 2635 4676 . - . ID=g12770.t1;Parent=g12770;Name=g12770.t1 NODE_2819_length_5062_cov_35.8971 . five_prime_UTR 4675 4676 . - . ID=g12770.t1.utr5p1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . exon 4536 4676 . - . ID=g12770.t1.exon1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . CDS 4536 4674 . - 0 ID=cds.g12770.t1;Parent=g12770.t1;5_prime_partial=true NODE_2819_length_5062_cov_35.8971 . exon 4043 4216 . - . ID=g12770.t1.exon2;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . CDS 4043 4216 . - 2 ID=cds.g12770.t1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . exon 3651 3790 . - . ID=g12770.t1.exon3;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . CDS 3651 3790 . - 2 ID=cds.g12770.t1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . exon 3147 3269 . - . ID=g12770.t1.exon4;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . CDS 3147 3269 . - 0 ID=cds.g12770.t1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . exon 2635 2787 . - . ID=g12770.t1.exon5;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . CDS 2692 2787 . - 0 ID=cds.g12770.t1;Parent=g12770.t1 NODE_2819_length_5062_cov_35.8971 . three_prime_UTR 2635 2691 . - . ID=g12770.t1.utr3p1;Parent=g12770.t1 #PROT g12770.t1 g12770 DGVPSKAGGLLQYGTPVVLRCAITGTESGRLVVRKVDKNCILLDGTDPVSQLHKVAFQSSDSEGGEPSFLGLRGENVSHINGTLQADGKSVAIDDAATWTIIGTDRVRYTFCESLGPVTSPVTPVPLVEEVKQQNKRLVELHGENFMPNLKVWFADAPAETLYRCAELLVCSPPPIGQIRDCGWTHVRKRTEVRLFLVRDDGVVYKTDCTYTYAAERLPSTAP* # ORIGINAL: g12769.t1 original gene structure, not modified by PASA NODE_2819_length_5062_cov_35.8971 AUGUSTUS gene 271 2203 . - . ID=g12769;Name=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS mRNA 271 2203 . - . ID=g12769.t1;Parent=g12769;Name=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS exon 2123 2203 . - . ID=g12769.t1.exon1;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS CDS 2123 2203 . - 0 ID=cds.g12769.t1;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS exon 1566 1661 . - . ID=g12769.t1.exon2;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS CDS 1566 1661 . - 0 ID=cds.g12769.t1;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS exon 715 854 . - . ID=g12769.t1.exon3;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS CDS 715 854 . - 0 ID=cds.g12769.t1;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS exon 271 535 . - . ID=g12769.t1.exon4;Parent=g12769.t1 NODE_2819_length_5062_cov_35.8971 AUGUSTUS CDS 271 535 . - 1 ID=cds.g12769.t1;Parent=g12769.t1 #PROT g12769.t1 g12769 MEYDFDNRPSKAENGADDAKREALRQKVASIRDDIAGQAELIVQEKMMEKIISLAEQIQEADPFRLVGVDKVIDNTVLPVARAVTSDVDDGAPPSKKRKLDIVGDNTVEPIPCNKVVGDFLKQIKKEIMELIQMCNTVKIWIQLNIPRIEDGNNFGVSIQEETVGELTRAEDSGFAVLESITKYYATRGKLSSK # ORIGINAL: g3131.t1 original gene structure, not modified by PASA NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS gene 304 1928 . + . ID=g3131;Name=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS mRNA 304 1928 . + . ID=g3131.t1;Parent=g3131;Name=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS exon 304 682 . + . ID=g3131.t1.exon1;Parent=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS CDS 304 682 . + 1 ID=cds.g3131.t1;Parent=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS exon 851 1457 . + . ID=g3131.t1.exon2;Parent=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS CDS 851 1457 . + 0 ID=cds.g3131.t1;Parent=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS exon 1694 1928 . + . ID=g3131.t1.exon3;Parent=g3131.t1 NODE_4253_length_1928_cov_40.5132_potentialcontaminant AUGUSTUS CDS 1694 1928 . + 2 ID=cds.g3131.t1;Parent=g3131.t1 #PROT g3131.t1 g3131 VFSSDPNLHASALGSGSLSETHNTTSRALGNRCNLPVAGAPSFSNNPRLSVLHAPMTLRGMAGIDLSNNPALMRVVKAGRIFGSLRIEGSNIIQFEGVENITTILESVSLLNADVVVFESLTSLIEVVPLLQKLDYVGINFGLALNSDLVTIAAGAFPALSKVGGSLLIAQNPELVNVEYGAFPSLASVGGVLVFGLHPRMRWMDGINNASVIGGLYVIGNPALDAVTGLHAVRTIGPLVDPGFSLPGFDVAAFNNLTAQGIAVGILYNTVLTSIRGLTVSAVIGKVDIVTNPRFCAYDVDLTLAIVAPPGLAASSMSRVVGNKETWCRCTGRTLESPADFATMSGCISVHGVLRIVSHLANADLSPLASIHSVDGYLIFENIRNVRRLQGLPLLSWVSGSLTVAN # PASA_UPDATE: g5405.t1, single gene model update, valid-1, status:[pasa:asmbl_3285,status:12], valid-1 NODE_2019_length_8071_cov_40.6073 . gene 3155 4832 . + . ID=g5405;Name=g5405.t1 NODE_2019_length_8071_cov_40.6073 . mRNA 3155 4832 . + . ID=g5405.t1;Parent=g5405;Name=g5405.t1 NODE_2019_length_8071_cov_40.6073 . five_prime_UTR 3155 3191 . + . ID=g5405.t1.utr5p1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 3155 3292 . + . ID=g5405.t1.exon1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 3192 3292 . + 0 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 3500 3635 . + . ID=g5405.t1.exon2;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 3500 3635 . + 1 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 3809 3919 . + . ID=g5405.t1.exon3;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 3809 3919 . + 0 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 4199 4282 . + . ID=g5405.t1.exon4;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 4199 4282 . + 0 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 4495 4576 . + . ID=g5405.t1.exon5;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 4495 4576 . + 0 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . exon 4743 4832 . + . ID=g5405.t1.exon6;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . CDS 4743 4804 . + 2 ID=cds.g5405.t1;Parent=g5405.t1 NODE_2019_length_8071_cov_40.6073 . three_prime_UTR 4805 4832 . + . ID=g5405.t1.utr3p1;Parent=g5405.t1 #PROT g5405.t1 g5405 MASRGKGETEKLKQNVEEQLDRLMQQLADLEECRADLSTEEYAETKKETIDQLKEFNVSLKKMMTGNMTLVDSLGGIQLAIQAAISDAFHTPEIIRLFAKKQPGQLRERLADLQQQVRLGKLAESAYDAQAVEILMALKKLGEILSPAEGDYLASHTSAALKAFEAVSTELASSDKVLPVAGSQIQKAQAR* # PASA_UPDATE: g5406.t1, single gene model update, valid-1, status:[pasa:asmbl_3286,status:12],[pasa:asmbl_3287,status:12], valid-1 NODE_2019_length_8071_cov_40.6073 . gene 5221 7927 . + . ID=g5406;Name=g5406.t1 NODE_2019_length_8071_cov_40.6073 . mRNA 5221 7927 . + . ID=g5406.t1;Parent=g5406;Name=g5406.t1 NODE_2019_length_8071_cov_40.6073 . five_prime_UTR 5221 5348 . + . ID=g5406.t1.utr5p1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 5221 5465 . + . ID=g5406.t1.exon1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 5349 5465 . + 0 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 5565 5633 . + . ID=g5406.t1.exon2;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 5565 5633 . + 0 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 5869 6051 . + . ID=g5406.t1.exon3;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 5869 6051 . + 0 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 6234 6318 . + . ID=g5406.t1.exon4;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 6234 6318 . + 0 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 6689 6800 . + . ID=g5406.t1.exon5;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 6689 6800 . + 2 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 6977 7121 . + . ID=g5406.t1.exon6;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 6977 7121 . + 1 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 7407 7598 . + . ID=g5406.t1.exon7;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 7407 7598 . + 0 ID=cds.g5406.t1;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . exon 7811 7927 . + . ID=g5406.t1.exon8;Parent=g5406.t1 NODE_2019_length_8071_cov_40.6073 . CDS 7811 7927 . + 0 ID=cds.g5406.t1;Parent=g5406.t1;3_prime_partial=true #PROT g5406.t1 g5406 MAPGAEEVEEQPKRRLSLNFGGIFRKASEPQKVETKEAKIRKVSHVVEGAMREEPKKDMPVEMFKRRALVTCGNLGVLKVEGAIGKYVMFKRSNGQIQVAKLIKVNEVKDTLRVEWDEDQHTKVKDIDIAMFNELNTDGYPDTSPAAAIGEGGDGTRKPLAPQKMNKAQGGLQVLGGGGAGSISLDVDETSKAAHIDGNSFLDWFSRQDQHVQTELLLRQVARVNPQQVQDVHEAVSAMVGGMYGTRDRSFSVDTTASATVGPTGTLPPLASSSGSALLRLRDRRDTMAEAPTLAQLVSNQSRVGEFLDKLPPNVAVRILSMVGLFSLGQAALVCSSWKK # PASA_UPDATE: g5404.t1, single gene model update, valid-1, status:[pasa:asmbl_3284,status:12], valid-1 NODE_2019_length_8071_cov_40.6073 . gene 1379 2980 . - . ID=g5404;Name=g5404.t1 NODE_2019_length_8071_cov_40.6073 . mRNA 1379 2980 . - . ID=g5404.t1;Parent=g5404;Name=g5404.t1 NODE_2019_length_8071_cov_40.6073 . five_prime_UTR 2973 2980 . - . ID=g5404.t1.utr5p1;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . exon 2832 2980 . - . ID=g5404.t1.exon1;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . CDS 2832 2972 . - 0 ID=cds.g5404.t1;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . exon 1975 2343 . - . ID=g5404.t1.exon2;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . CDS 1975 2343 . - 0 ID=cds.g5404.t1;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . exon 1379 1740 . - . ID=g5404.t1.exon3;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . CDS 1567 1740 . - 0 ID=cds.g5404.t1;Parent=g5404.t1 NODE_2019_length_8071_cov_40.6073 . three_prime_UTR 1379 1566 . - . ID=g5404.t1.utr3p1;Parent=g5404.t1 #PROT g5404.t1 g5404 MEQKISSGVHINKQRASTTTIVLKHSAEKDKMAGKFDLKGQIGFYAQYHHNSINKLIHITCVPLILWSALVWLSYIDLGAQLGVAPIPFDIPNVLAGTVAVNGALVLVTLFGLYYTILKFVPGFVYAVVLFGLYYTATAFGATNPDATKISIGIHVACWIAQFVGHGVFEKRQPALFDSLFQSLVLAPFFVWLELLFALGLYPTLALEIKQKASRDIHAWRKTQKSS* # ORIGINAL: g5403.t1 original gene structure, not modified by PASA NODE_2019_length_8071_cov_40.6073 AUGUSTUS gene 86 956 . + . ID=g5403;Name=g5403.t1 NODE_2019_length_8071_cov_40.6073 AUGUSTUS mRNA 86 956 . + . ID=g5403.t1;Parent=g5403;Name=g5403.t1 NODE_2019_length_8071_cov_40.6073 AUGUSTUS exon 86 239 . + . ID=g5403.t1.exon1;Parent=g5403.t1 NODE_2019_length_8071_cov_40.6073 AUGUSTUS CDS 86 239 . + 0 ID=cds.g5403.t1;Parent=g5403.t1 NODE_2019_length_8071_cov_40.6073 AUGUSTUS exon 505 956 . + . ID=g5403.t1.exon2;Parent=g5403.t1 NODE_2019_length_8071_cov_40.6073 AUGUSTUS CDS 505 956 . + 2 ID=cds.g5403.t1;Parent=g5403.t1 #PROT g5403.t1 g5403 MSSINGTLGTCLPGNSTVWDTSYACDSEKYEYGYCTMSTWWLAILALVSYIACFAPGMGPMPWTINSEIYPLHVRSQGNSAATAVNWCSNLVVSMTFLTMTRALTTHGAFWLYAGICAVGIVFVYVFVPETRGRSLEDIQVLFASSGFPGLDDVRARAKSASAAKLAAASLGGTHDELGRSSIGVVSTTTYGGGDSHASLH* # PASA_UPDATE: g3353.t1, single gene model update, valid-1, status:[pasa:asmbl_7019,status:12], valid-1 NODE_4144_length_2124_cov_28.4827 . gene 40 1751 . + . ID=g3353;Name=g3353.t1 NODE_4144_length_2124_cov_28.4827 . mRNA 40 1751 . + . ID=g3353.t1;Parent=g3353;Name=g3353.t1 NODE_4144_length_2124_cov_28.4827 . five_prime_UTR 40 40 . + . ID=g3353.t1.utr5p1;Parent=g3353.t1 NODE_4144_length_2124_cov_28.4827 . exon 40 1174 . + . ID=g3353.t1.exon1;Parent=g3353.t1 NODE_4144_length_2124_cov_28.4827 . CDS 41 1174 . + 0 ID=cds.g3353.t1;Parent=g3353.t1;5_prime_partial=true NODE_4144_length_2124_cov_28.4827 . exon 1458 1751 . + . ID=g3353.t1.exon2;Parent=g3353.t1 NODE_4144_length_2124_cov_28.4827 . CDS 1458 1751 . + 0 ID=cds.g3353.t1;Parent=g3353.t1 #PROT g3353.t1 g3353 TMWSVAPGARDHQRGDKDKRKAKMQSFNGVASADGVFNVSIDAASLVSIPDGRPAYVTVRGYNGAGRYAETQVAMLVDCTPPAIGRAYEVTGTDAASLRRDTLVQSSVDSIIVAVPGFVDPHAPNLLFDADLGYGVDKWSTIVSKATPTMGAGGVPWIELTGLVLSVNDTLRVRVRAFNSVNGYGEATTTGVTVMPSPSFASASVSFVAARGGKSRDGNSFQSSASEVTITWSGFPNTTVVSYRWAVTKSVSSPLVFITAPSGHRNTATSILPSKSSLVPGDMYYACVVADLYTGDSNEASPVCTTGWLMADVTAPPNATIAFTHGIDTNGASVRLSGSVSAADAESGIYSIDWQVAGTATGAQPLTPWMTLRLNETQAIERILPLPFNTFPTRPLYVSARVCNNAALCSTRTALSIPSGAPMFLPRLLDVTDVEWKRPGHGDDIESTRSKDTLIAALVNSPKRLTDTTWSVVLK* # ORIGINAL: g8345.t1 original gene structure, not modified by PASA NODE_4085_length_2208_cov_33.1242 AUGUSTUS gene 40 2074 . - . ID=g8345;Name=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS mRNA 40 2074 . - . ID=g8345.t1;Parent=g8345;Name=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 2063 2074 . - . ID=g8345.t1.exon1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 2063 2074 . - 0 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 1860 1928 . - . ID=g8345.t1.exon2;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 1860 1928 . - 0 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 1453 1606 . - . ID=g8345.t1.exon3;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 1453 1606 . - 0 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 1174 1259 . - . ID=g8345.t1.exon4;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 1174 1259 . - 2 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 883 1015 . - . ID=g8345.t1.exon5;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 883 1015 . - 0 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 537 643 . - . ID=g8345.t1.exon6;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 537 643 . - 2 ID=cds.g8345.t1;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS exon 40 231 . - . ID=g8345.t1.exon7;Parent=g8345.t1 NODE_4085_length_2208_cov_33.1242 AUGUSTUS CDS 40 231 . - 0 ID=cds.g8345.t1;Parent=g8345.t1 #PROT g8345.t1 g8345 MSGIILLVHTNAIKKLPDRFNELKKLRFLDLHVNRLKCVPPTIGHLFSLRVLDVSHNRIEVLPDTLGDLASLVTLNIKGNQIDSLPASLSKLKRLETLDVSSNNIVMIPPEYGRLSGSLVRFDISANPRLTQPPPAVASKGLVDVMMHLCTLAKIEYVQPGNAAITADGDRSGVVASPGADALKMRRLEEESRIEAHIQEREKQKGVMQQQKMAMDAAKTDEVTRQRELGDFMRMRRMSELAIHTNEKQLQ # ORIGINAL: g6341.t1 original gene structure, not modified by PASA NODE_3479_length_3372_cov_37.5053 AUGUSTUS gene 2105 3133 . + . ID=g6341;Name=g6341.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS mRNA 2105 3133 . + . ID=g6341.t1;Parent=g6341;Name=g6341.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 2105 3133 . + . ID=g6341.t1.exon1;Parent=g6341.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 2105 3133 . + 0 ID=cds.g6341.t1;Parent=g6341.t1 #PROT g6341.t1 g6341 MEDEIEYSPDAQTCDQCDGKGTLWCEDCASMLCAACDVSTHADASRADHARAPLDAEEFEEEITEQDMLDMLDDHNDPFVLCRQLFRRDIDLRMEGLSCGIKSCCESQGESGLRCDCVKHMSAAQPPEALGSIGGHRLQRLSVDQITHLYEHGFVVVTGFVPPAVTDAVRETLAALVSGGVMQPALRPGQDVYRDQASRGDLIAWLHAADASVPASVQTVLAALDAIRCDASTALSTPLDTTPEVQLAVYPGSGAGYVRHRDGYPRYNDGSNERRVTSILYCNAGWNAATDGGCLRLFLRGGCGHVDVEPHAGTVVVFMSGAVEHEVMPAYRDRVAVTAWFH* # ORIGINAL: g6340.t1 original gene structure, not modified by PASA NODE_3479_length_3372_cov_37.5053 AUGUSTUS gene 37 1673 . + . ID=g6340;Name=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS mRNA 37 1673 . + . ID=g6340.t1;Parent=g6340;Name=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 37 547 . + . ID=g6340.t1.exon1;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 37 547 . + 1 ID=cds.g6340.t1;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 712 871 . + . ID=g6340.t1.exon2;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 712 871 . + 0 ID=cds.g6340.t1;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 1136 1201 . + . ID=g6340.t1.exon3;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 1136 1201 . + 2 ID=cds.g6340.t1;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 1324 1406 . + . ID=g6340.t1.exon4;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 1324 1406 . + 2 ID=cds.g6340.t1;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS exon 1554 1673 . + . ID=g6340.t1.exon5;Parent=g6340.t1 NODE_3479_length_3372_cov_37.5053 AUGUSTUS CDS 1554 1673 . + 0 ID=cds.g6340.t1;Parent=g6340.t1 #PROT g6340.t1 g6340 ANLSDSYFTNRQDRYIVIRNARLLADFFSDLTGVILSHSFRVDCDDNVRPPTPHPYDEPRAFKRAAHNSFTELLSTHTAIAKLHSNSSRTTSNSGGESEGEEASAIVCPMLQMGPFGVDQDEVATAGLLRGAPADATVRIGSGYFNLTKAYIDALLSSPAAFEILTASPQANGFYGAKGVAGLIPAAYTHIERQFLKEAARRGRSGAVCVREYHRPGWTFHSKGLWFYLPGERLPSLTLIGSPNFGYRSVYRDIEAQVAILTQNTALRERLDTERIFLFSGAKDATLTSLATPERATSTGVAISARIIRSFF* # PASA_UPDATE: g5801.t1, single gene model update, valid-1, status:[pasa:asmbl_7127,status:12], valid-1 NODE_4231_length_1975_cov_40.4326 . gene 101 1515 . - . ID=g5801;Name=g5801.t1 NODE_4231_length_1975_cov_40.4326 . mRNA 101 1515 . - . ID=g5801.t1;Parent=g5801;Name=g5801.t1 NODE_4231_length_1975_cov_40.4326 . five_prime_UTR 1435 1515 . - . ID=g5801.t1.utr5p1;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . five_prime_UTR 1248 1267 . - . ID=g5801.t1.utr5p2;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . exon 1435 1515 . - . ID=g5801.t1.exon1;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . exon 1191 1267 . - . ID=g5801.t1.exon2;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . CDS 1191 1247 . - 0 ID=cds.g5801.t1;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . exon 1013 1081 . - . ID=g5801.t1.exon3;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . CDS 1013 1081 . - 0 ID=cds.g5801.t1;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . exon 524 620 . - . ID=g5801.t1.exon4;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . CDS 524 620 . - 0 ID=cds.g5801.t1;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . exon 101 248 . - . ID=g5801.t1.exon5;Parent=g5801.t1 NODE_4231_length_1975_cov_40.4326 . CDS 101 248 . - 2 ID=cds.g5801.t1;Parent=g5801.t1;3_prime_partial=true #PROT g5801.t1 g5801 MEGEEELGSMPEFPANFRKNRRCSVSAESMTPSNETHTKTEKVVIHKSKESYKRIDASTQRNLLFRNLDEDQRKDVADAMFERKVTAGEVIIQQGDEGDNFYVVDSGSFDVFVDGRKVLQITD # PASA_UPDATE: g8260.t1, single gene model update, valid-1, status:[pasa:asmbl_2028,status:12], valid-1 NODE_157_length_34175_cov_53.1872 . gene 22704 30674 . - . ID=g8260;Name=g8260.t1 NODE_157_length_34175_cov_53.1872 . mRNA 22704 30674 . - . ID=g8260.t1;Parent=g8260;Name=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 30522 30674 . - . ID=g8260.t1.exon1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 30522 30674 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 30245 30313 . - . ID=g8260.t1.exon2;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 30245 30313 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 29966 30067 . - . ID=g8260.t1.exon3;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 29966 30067 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 29394 29498 . - . ID=g8260.t1.exon4;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 29394 29498 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 29160 29208 . - . ID=g8260.t1.exon5;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 29160 29208 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 28715 28756 . - . ID=g8260.t1.exon6;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 28715 28756 . - 2 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 28379 28451 . - . ID=g8260.t1.exon7;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 28379 28451 . - 2 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 27871 27962 . - . ID=g8260.t1.exon8;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 27871 27962 . - 1 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 27544 27625 . - . ID=g8260.t1.exon9;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 27544 27625 . - 2 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 27080 27299 . - . ID=g8260.t1.exon10;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 27080 27299 . - 1 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 26646 26762 . - . ID=g8260.t1.exon11;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 26646 26762 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 26144 26374 . - . ID=g8260.t1.exon12;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 26144 26374 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 25920 26032 . - . ID=g8260.t1.exon13;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 25920 26032 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 25539 25644 . - . ID=g8260.t1.exon14;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 25539 25644 . - 1 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 25180 25350 . - . ID=g8260.t1.exon15;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 25180 25350 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 24848 24973 . - . ID=g8260.t1.exon16;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 24848 24973 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 24288 24440 . - . ID=g8260.t1.exon17;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 24288 24440 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 23889 23990 . - . ID=g8260.t1.exon18;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 23889 23990 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 23487 23611 . - . ID=g8260.t1.exon19;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 23487 23611 . - 0 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . exon 22704 23202 . - . ID=g8260.t1.exon20;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . CDS 22977 23202 . - 1 ID=cds.g8260.t1;Parent=g8260.t1 NODE_157_length_34175_cov_53.1872 . three_prime_UTR 22704 22976 . - . ID=g8260.t1.utr3p1;Parent=g8260.t1 #PROT g8260.t1 g8260 MVAPDRSSGKRASSRAAQLAGLEGIISQEDPEVIFVDLKEIGHGSTGSVYKAKDTRSDKVVALKKMSISTTKDEDFEDIAKEIKFMSSCKHDHVTQYFGSFMKADTIWIAMEFCAGSVNDILEIFKKPLQEVEIAAIVFQVLKGLDYLHQNNKIHRDIKGGNILLNEQGIVKLVDFGASRELESADERANTFIGTPYWMAPELITAMETGTYGTKVDIWSLGITCIELAELKPPHFKLHAMSALFHIPQSDAPQLQSGDFKDFLSKCLEKDPEKRWPADELLRHPFMKIDEGAIRPLLSSLMQRSKEAVKMIDYEEIMRGLNQARIDDDQESLESHSTNGDADSAVDVNGATQEPGPSTEARAAQMAKQQVLDRATDTIRPRHLLVREKAEASKQERDLLQNQMRELRRSKARQQKAVKTLVSKQQLDMDILRKQHTRELESLSKVHETELEKLRKEQRDELDGLQRAHAAEKKRLLDSMKDSEKRQLKQHKHLVKEKVKELEKNHKRQLKELKDAGKDDRELKKRQKDEIALVTSEMDRQFQLRMQELLESETTRLGAQQRDKIERLLREHCLKVFEVLATQLSTRHDLQLRQQDIEHELMLQHGMQSHALIEEHQAEQHRIEHLQLTTIHERSEQDLQKRHFADKRHHSKTLKKMEEDMRKRFKREAGEPEAASEIERRTIKRKQREDFEQYKEQLLQSETFKFTKAQVEEQARLTEANMKEREDLDKYHFDRKNLLRSAHKAEMDRVRAKIEKEKSGMRKWLEVDRKDFQEKRDLGIVPHPDSDKFNFAQLHIMRDQAHAPHGDPIVIERAMPHD* # ORIGINAL: g8261.t1 original gene structure, not modified by PASA NODE_157_length_34175_cov_53.1872 AUGUSTUS gene 31827 33938 . - . ID=g8261;Name=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS mRNA 31827 33938 . - . ID=g8261.t1;Parent=g8261;Name=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 33808 33938 . - . ID=g8261.t1.exon1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 33808 33938 . - 0 ID=cds.g8261.t1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 33333 33458 . - . ID=g8261.t1.exon2;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 33333 33458 . - 1 ID=cds.g8261.t1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 32956 33108 . - . ID=g8261.t1.exon3;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 32956 33108 . - 1 ID=cds.g8261.t1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 32410 32538 . - . ID=g8261.t1.exon4;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 32410 32538 . - 1 ID=cds.g8261.t1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 32057 32192 . - . ID=g8261.t1.exon5;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 32057 32192 . - 1 ID=cds.g8261.t1;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 31827 31913 . - . ID=g8261.t1.exon6;Parent=g8261.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 31827 31913 . - 0 ID=cds.g8261.t1;Parent=g8261.t1 #PROT g8261.t1 g8261 MPTALFSLAHKLVDVDPDSAVAWYAVGSYYLLCGNNPHARRYFGKATSMNPRFSAAWIAYGHSFAMDGEHDQAIAAYSAASRALRGCHLPLLYLGMEYLHNSAFDLAEQYMTMAADLCPRDPLLTHERGILAFRNQDYASALSLFTTALSLAQAHSGSPVSREAWEPLLINMGHACRKLGDYAAALRNYERALLLCPGTASTHASIAFTHQLCGNIEEAVEHYHKSLAIKPDGAFATRMLQGALEEMFAGPVG* # ORIGINAL: g8256.t1 original gene structure, not modified by PASA NODE_157_length_34175_cov_53.1872 AUGUSTUS gene 66 851 . - . ID=g8256;Name=g8256.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS mRNA 66 851 . - . ID=g8256.t1;Parent=g8256;Name=g8256.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 822 851 . - . ID=g8256.t1.exon1;Parent=g8256.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 822 851 . - 0 ID=cds.g8256.t1;Parent=g8256.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 66 670 . - . ID=g8256.t1.exon2;Parent=g8256.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 66 670 . - 0 ID=cds.g8256.t1;Parent=g8256.t1 #PROT g8256.t1 g8256 MALRKRVNGETDSSNALPAINTASSSALTGNGSAPASPRPAVTRAAAQSSAVDATRSSTPPLSSSMTKLMHLRQQHSPICSDPLSPGESGVASDKLEYLQTRLEQQEVLVGILKKDVEDGKQKIAALKQRCEEADRQRALQEQRAGAAIREKEEAVRALAMEQAKGADLASSLKSAQEDLDQVISAGSGDAETKRELELFKSKARAADEHL # PASA_UPDATE: g8258.t1, single gene model update, valid-1, status:[pasa:asmbl_2027,status:3], valid-1 NODE_157_length_34175_cov_53.1872 . gene 11280 15109 . - . ID=g8258;Name=g8258.t1 NODE_157_length_34175_cov_53.1872 . mRNA 11280 15109 . - . ID=g8258.t1;Parent=g8258;Name=g8258.t1 NODE_157_length_34175_cov_53.1872 . five_prime_UTR 14985 15109 . - . ID=g8258.t1.utr5p1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . exon 14742 15109 . - . ID=g8258.t1.exon1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . CDS 14742 14984 . - 0 ID=cds.g8258.t1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . exon 13009 14457 . - . ID=g8258.t1.exon2;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . CDS 13009 14457 . - 0 ID=cds.g8258.t1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . exon 12646 12815 . - . ID=g8258.t1.exon3;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . CDS 12646 12815 . - 0 ID=cds.g8258.t1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . exon 11280 12369 . - . ID=g8258.t1.exon4;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . CDS 11727 12369 . - 1 ID=cds.g8258.t1;Parent=g8258.t1 NODE_157_length_34175_cov_53.1872 . three_prime_UTR 11280 11726 . - . ID=g8258.t1.utr3p1;Parent=g8258.t1 #PROT g8258.t1 g8258 MAENAPQAQKVPRAVPASGDDDGDLDPFGHPRVPLRGHYSREKCDKRREWVEKFCGHKLEQLGHWWENEGVEDCASTEKLKGNIENCIGLAKIPVGIAGPLLIHGEDIKGYVLAPFCTTEGALVASATRGATALNRAGGVYTCVSKQQMMRAPTFFCKTGAQARKLEKWIETNRPGIEHEIAQVSKHAKLTTMMPIRQSKVLHLRMNYETGDAAGQNMTTTTTWRAIKWIVQRVREEVSDIEIVEYLVEGNASGDKKVNSLNFHDVRGVTAEAEAFLSEAVLKSVLKIDAKSLMRTLNSMQQSAIRIGMMGFNINVSNTVAAIFAATGQDMACVHESSLAQLCAEEVPGGIHVSMTIPSLIIGTVGGGTMLATQRECLNIIGCSGKNRVRRLAEVIAAYALALDLSTASAIGSGQFANAHERLGRNRPENGFKQEMLTSDFFAQVFAKEGELVKWSELKVDASSSILSDMTKRELSKLVGHFGFEVTLIPKGKKEEETCRIVLKVKATDEETVNMVNKMAQGCGGKLAEKYEALKFETGFRKCHVRELAMVAMADPRFTAISPKVYFVRRDDKKEIFLYAMEYLEKVSHLNSVDAIEIWTQNDIHTALADIAAFHAIFLDKWSTIKDADWIDYPSRGRMIALKDLWLELLRHNSTEFPELWTPARALLVTRFIDNISLVWRELESAPRTLIHNDFNPRNVCLRKRDGRMRLCAYDWELATIHVPQHDVAEFLAFVLPPSASTQERLSYVEFYRVALEKESGIALDAVRFVKVFDIAAADLAVNRLALYTMAHMFKDYRFLPRVLNSHFTYLESMLSKDRFSKLVDDESGEKAKL* # ORIGINAL: g8257.t1 original gene structure, not modified by PASA NODE_157_length_34175_cov_53.1872 AUGUSTUS gene 1685 9958 . - . ID=g8257;Name=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS mRNA 1685 9958 . - . ID=g8257.t1;Parent=g8257;Name=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 9563 9958 . - . ID=g8257.t1.exon1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 9563 9958 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 8707 9307 . - . ID=g8257.t1.exon2;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 8707 9307 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 8246 8514 . - . ID=g8257.t1.exon3;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 8246 8514 . - 2 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 6098 8029 . - . ID=g8257.t1.exon4;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 6098 8029 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 3531 5876 . - . ID=g8257.t1.exon5;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 3531 5876 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 3044 3251 . - . ID=g8257.t1.exon6;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 3044 3251 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 2683 2822 . - . ID=g8257.t1.exon7;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 2683 2822 . - 2 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 2317 2395 . - . ID=g8257.t1.exon8;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 2317 2395 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 2083 2174 . - . ID=g8257.t1.exon9;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 2083 2174 . - 2 ID=cds.g8257.t1;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 1685 1927 . - . ID=g8257.t1.exon10;Parent=g8257.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 1685 1927 . - 0 ID=cds.g8257.t1;Parent=g8257.t1 #PROT g8257.t1 g8257 MSRQGSLAPGLGGGSSSGSSLGGQASTATSAPKDPLRGAVSRLRHRFFGGGASSKTPTSSAANAGAFEENDFRAVLAELRANASMPLSNRLRILKDLCDVVGLYRLESDELYPMWAAVQDLLVEDLPPEAAQTIFQFMSCLADTQCERLGLLRARFFETIESQRIRDADLGLQLGLLTRLTLNGRDISCFEWRVGPLLLLWRSPISRHGHVKEFLALVGNIVRYNFAFLDPECVAGLIRYACVVCSSSSDGEHVIAGLEMLDVVVRYGFIPSACLSPLVTVLCRTLNIERFCESSWKTMKNILKGPMGHTTIRAMCDILEDPNNKDTVGLLRGAVFYIGMATWGAQRIPNLKQPVLSVLPSFLRALASQQQIVAYEVALSLSRLVKKFGMDLPCPHWDLIMDVLESVRTCLPRSALEDNSAQTTSLLHVMDKVVETIEDFYVQQKYNGPSRRLFDLLESYKHRRPESSVILLLNYKANQLHPATEAWLSNIRSFLDVYLKKEGRRHVRLKALSVLSSVFSKARHTYLDELLSEVIPDYLENLPSERDAAVRQMGIELLVDIAPDCSSRHYVPVMHLIHKAAFPAPLPLQPPTPSGVHVADDASSVGAAGGQSATLTTKDGASVSDGSVAGDGTKGNTVAGEERETDTAAWAAFTGLVAVFRKKLMHLPTSQALVAFNLLIQGLRDHYSPLSDGSSSRFFGTSGFKANVDSRSGADKASPPPAAATAQHPRWLSPRIRMALFTFLLGIRAHADGQVCVPSDTSNVEPIVSPHLMAGRASWTGSKDKAFKRTSSSSEPYVPPSSAGASAQVAGAGAGGGHALSVGGEGVDGAGSGATADGMDGMDGGNDATLAMEDVLAVAVECLRKETDWDIYALVLRELSSMLLCSRLFVLVPQKQLSALATTLTSKVSSGTLADTVTNAPVGKLRSELHVHAARLLTGLVAYKDRLTSRLHEDIIMCLDSGLTSKSDDVARVSAHGLVVCACDLRAAMRRRLRDVLERLMRSTIPSRAGLSVLGFLLSVVRTPVLHGNHVSDDKYNMLPFGIALQFVSADRPVKAPPQLSALALQVITVWFMQCRLQDRRKYARYIVKGLVQQKEPHSPTRELDEDTEVCVDLLSRHAYGNCASTPEKSPIADVLLRHSVSQTWIVGSGVVTIRTSPAGWAEVVVRRSTGVASFILRPQNKQYAEGDDLFQSPLGAMLAEVGFGGEPEQSTSPASTQQQLPHFPDKEKFWTRSAGPSPRVGPVADSVAVAKYGMPSAIVLASQLAHHSVTAHGTTPASAHVALGAHSASFGANALPLDDGMNVEPPGNVHHAPIQAHLTSDTGGGSRASPSEESDGKAAVRKISQPQQQQMVDLRGDARRTSSGEAARMAATVDMTSSAAIDVMQGGATSTAHSGGTNNPADFADGSLATASGVAVLSTELRRPRSKLSREISVAGPASLLSAMGHESMPDCTPPRHEGVGIIELLSSPARDAEFLDGKGTRTSAIAFSDASSPGMGGGASGHSGRRDDDMGMFDSPPSPSLAVIGTSPLTYAPLLSYEDDPADDATSGASKRERKGSSRGPPEFFAPATPSKPFIDEGAVAVARAAQQWDAGLDSFVLDAGDVLTPRKEAGAATSDRPSDGRPHHVTDAPLSIWPTDPLPGSHVALPTGVAAHVTQMQTQQSAAAAAAHGHVVQGHVVNRPESTFKSPGAMSPSESPHMGRSRDSPASSPARRFSRRDITWGGPAGLFDTTSAAAPTHTATAVPTPTAQLSSGVSVPPQVAAGSASASNQPPVSSVAHAVLAATGVGAAASAFPSSVPYSLYPSYVLLQVAHFAGVSERPLLLKRGEGSDRAINVLDRLPAYETHKVGVIYVGPGQTHETAILSNDGGTLRYLSMLQGMGKLLRLKGSDVYTGGLDRSEDSDGEFAFTWGDDTTQVVFHVATMMPNRESDVSRNNKKLHIGNDYVTIVYDNSGRNYAFGTVKGQFNFVEIVVRPVDDHLNEVHVKTRDAMSEFVPFSEPVVITNECVGEYVRQLSLQANMASQVYQAGQSQSEHSTNWKERLRQIKRMKTRLCETASDGKGSSSAAAAPAGAQGVLGGGSGGGGALEPICPADFTDFAV* # ORIGINAL: g8259.t1 original gene structure, not modified by PASA NODE_157_length_34175_cov_53.1872 AUGUSTUS gene 15858 22075 . + . ID=g8259;Name=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS mRNA 15858 22075 . + . ID=g8259.t1;Parent=g8259;Name=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 15858 16874 . + . ID=g8259.t1.exon1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 15858 16874 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 17238 17823 . + . ID=g8259.t1.exon2;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 17238 17823 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 18116 18267 . + . ID=g8259.t1.exon3;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 18116 18267 . + 2 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 18522 18632 . + . ID=g8259.t1.exon4;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 18522 18632 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 18888 19028 . + . ID=g8259.t1.exon5;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 18888 19028 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 19294 19386 . + . ID=g8259.t1.exon6;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 19294 19386 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 19577 19690 . + . ID=g8259.t1.exon7;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 19577 19690 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 19820 19965 . + . ID=g8259.t1.exon8;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 19820 19965 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 20105 20348 . + . ID=g8259.t1.exon9;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 20105 20348 . + 1 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 20552 20692 . + . ID=g8259.t1.exon10;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 20552 20692 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 20976 21029 . + . ID=g8259.t1.exon11;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 20976 21029 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 21236 21276 . + . ID=g8259.t1.exon12;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 21236 21276 . + 0 ID=cds.g8259.t1;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS exon 21493 22075 . + . ID=g8259.t1.exon13;Parent=g8259.t1 NODE_157_length_34175_cov_53.1872 AUGUSTUS CDS 21493 22075 . + 1 ID=cds.g8259.t1;Parent=g8259.t1 #PROT g8259.t1 g8259 MSAHPKYRVSGNSIELVVDNEEIEIKLDEVEVGDVIRFLRDERQPLGLWLVVALQYYRTRRHDELVRLLEAAMERADDRNFPSTNAERGELIDTLAAFHLITAFRATSQRTREEKLTAAKALYERRISDSGSDQSGYGFALLLTGEFTRAQAFFFKLSKKESVPSYLGRACLLFREAKYADALSLYRKALAMRPRCPASIRWAIGACFFKLGKVDRARAAFERALELEPTNLEALVSLAIVELNSERTDGIQKGMGLMKRAYELDPNYALALDHISNHFFYRNQVAKARDLAEKAALHAVSEESRGLSYYLLGRSHHADDDYDAALKAYHQATKASPTLVLAQYGLGQMFILKGDHNKACECFERVLASNDSCYEALKILGCIYASSTSVEKRQRANKLLKRVVAVSPEDLEAWIELAALQESTEPERALEAYGKALALLQESVGAASQPEILNNIGALHLRLGNVTDARRHFNEAMVAVDANAEEEPDAARYFSQVKVTMQYNMARLHEHDGNRDEARGIYTDILSRFPGYLDCHFRLACIDYDEGNRDAAISALESVIAQNPKNADALCLMGNFRAKLGEFDKALESFGKVLANGNDSYARLAVASITHQLALKSDPKKKDERLKRSLDSFASVLRDDPSNMYAANGVAAILAQKGNVRQAGDVFAQIREASSEMLDAHLNSALVSVDQALYVNAVKLYEKCIKMTEEKDPSVFVQLARAYFKWGKYDDCIAQLDRALSISPENPLAVYNKALAQLMRIRGRIGGKDAKEDEVLVDIADAEGVLSVLSSFHDDLKDPSKGKRADALIGYGFEPHAVSRAIDTCRELIANSESHVTRARRIQESIHERAAKQQEMKEKALKQIEEEKELKRAEEERQKEALVAQRMGYREKMSHVLAAPVVTGDEETQRSSSTKRRKTDDGIIDDDEDNKEEKPPKKRARSEGREKKPRGGQRTKRAKKGSESSAGDDASSSSSEEEEESDASGGDEEEVVSTPESSGAEDKDDGDDETKAKAKADKAERKRKRAEDKKERKEKKVKERKEKKERKEKKAPSTEGKAKRTPAKTPAKTGRLQKFKSAETVTSSEDEDDAPARDASEAKSKDASESAADKDKDKEAGDGDGDGGAARRVRRRVVDDDSDD* # ORIGINAL: g12928.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 9212 10786 . - . ID=g12928;Name=g12928.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 9212 10786 . - . ID=g12928.t1;Parent=g12928;Name=g12928.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 9483 10786 . - . ID=g12928.t1.exon1;Parent=g12928.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 9483 10786 . - 0 ID=cds.g12928.t1;Parent=g12928.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 9212 9374 . - . ID=g12928.t1.exon2;Parent=g12928.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 9212 9374 . - 1 ID=cds.g12928.t1;Parent=g12928.t1 #PROT g12928.t1 g12928 MAQRAFDLWDVALACIVVGHVLLTPYTKVEESFNLQATHDFLFHGTDLSAYDHNDFPGVVPRTFVGSFLVSVLSYLPAKAALVAFDGDKQVVQIVVRTVLGLVLAASFCVFRNAAAAKFGPDVGRLLVVITATQFHLPFYMSRPLPNTFALCPVLLAYAMWLRGRMSAVIGLLAFAVAIFRAELLVLAGPIVLGELIRRRLALGRFILVGVISTAASIALTVAFDSVLWGRTLWPEGEVLYFNTVMNRSKDYGTAPFLWYFYSAIPRALNAWLPWLVAGVVLDTRITRLTIPLIAFVALYSFLPHKELRFIMYAFPVFNLGAAVGVARMLSSPRFQLLRLLALLGSIAIACFATATFVIVSTQNYPGGNALQQLHTTLLNGASVDHGVPSTFADGSVPRVFISNLAAQTGVSRFGQLKDSWLYVKEDGAETDYKRFTHFISETQLVPVPTRVLSTVKGFDKLGLDWSTWPPHIEFSLRPMLYILAREN* # ORIGINAL: g12935.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 30950 32602 . + . ID=g12935;Name=g12935.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 30950 32602 . + . ID=g12935.t1;Parent=g12935;Name=g12935.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 30950 32602 . + . ID=g12935.t1.exon1;Parent=g12935.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 30950 32602 . + 0 ID=cds.g12935.t1;Parent=g12935.t1 #PROT g12935.t1 g12935 MRSARGCGVRGLPCLKTGGAVLAMAVAVFLLLCPAAHAVDTTDNARKLPHPTHNTQPVKGIPDARPPPTQRRFNSTAVNALIEGMRPRFANADLGTLFANAYPNTLDTTVQFFAPAAASSEFPDAFVITGDIEALWLRDSANQLLTYAPLFAHDADLAALVCGLVRRHSVSLLIDPYANSFNFNASGAGHQNDDRQPRMRAEVFEGKYELDSVAAALKLAATYWEATQDAHCLFGDGVFLAGLDAALHVITDMQATLPSPSGASGPYSFQRETTVATDTLSQGGAGASGRRCGLSRSYFRPSDDATSLPFHVPSNAMLAVEAKRVGALLRGALQGLDMDLINDRSRFPPQPYYVRNGTWTVDDVSALADAFVALAATTAEAVENEAIGVSVGSRVFAYEVDGYGGAVFMDDANVPSLLSLPYLGFVAEGSPLWEVYQATRALVLSDRQPFFFEGSVASGVGSPHTGPGYIWPMSLVMRALTSTDDAEIAACIVALLASSAGTGFLHESFYLNDASRFTRSWFAWVNGLFGELVVKIANERPHLIFSTGAY* # ORIGINAL: g12929.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 11548 15790 . + . ID=g12929;Name=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 11548 15790 . + . ID=g12929.t1;Parent=g12929;Name=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 11548 14316 . + . ID=g12929.t1.exon1;Parent=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 11548 14316 . + 0 ID=cds.g12929.t1;Parent=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 14443 14750 . + . ID=g12929.t1.exon2;Parent=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 14443 14750 . + 0 ID=cds.g12929.t1;Parent=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 14971 15790 . + . ID=g12929.t1.exon3;Parent=g12929.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 14971 15790 . + 1 ID=cds.g12929.t1;Parent=g12929.t1 #PROT g12929.t1 g12929 MGEPLADRRTPAPRAVNAQKRVATDSPIEDASGVEPDETSEHAVESSSFNWATFDVRAYMRAIKNDPLPTKCPVPGCFKSYMSLNGVEYHLRHHGGPGLGRELDASLNASTIGSLSLRSSLNNSASGPTPGSASRKRKRGRSSIRPTDTAEGTPINWASPLVAPSARHQVPISALRFVDIELDGSVNQLDITHRTEVVRIDRDDDISAKPQPVVKVASASASAEPSPAVSLAPGQMSLTSSAPAGMLSFSFPTPLSEFPKDWFDVKGDFLASERLTLPAAVVKIMSEASGNVSDSRPASYYRYIDKSAEELDSTVEYDMDEEDSEWLAIINGRRVDAGLKAVPPTVFELLMDRLEKESCFLSQAQGRHPAPPTDDDAVCCVCKDGESDNTNAIIFCDACNIPVHQDCYGVPYIPEGQWLCRRCLASPSRGVDCLLCPNKGGAFKQTNDGRWAHVACAVWVPETSFANAVYLEPIDGVDDIPKARWKLTCYICRRREGACIQCSKTNCYAAFHVTCAQEAGTFMEIHHESNVEFPTKTAYCAEHSPADDSAPMGGRTQAHDSLGDVVGNDDEDDEGDDHGEAQRRRKRRLRNARKILQDDPEMPVVSVPVVPVHRLAKIVGRLSIEKKAQFVQKVQAYWKLKRQSRCGVPLIRRLQITHQRPANADTRTGDPVSDTPDDVDVQRLKWQRLRQDLERVRLLVEQVRKREKQKREGIRVAQQILELCVDPRQPIIRRIVTRLQDLDYKGFFSQPVPIQYVPDYLDVVSHPMDLGTMAHKAERCEYDDLHGVAEDLRLVCENAILYNAHDTPYYKAAVRLRDQAVGVFEEGGQLLAECEIAVDTLYGEADVADIVLPLFPSSMVATETTNKTGGNAVTEGGDDATMGANGGDGSSGSGSASESEDSDSESDSSSDSSESSSSSSHVKPVPADGESTKPSADALILDSKLTSRGRLPVGGTTFGMWDVVWAKCRGFPWYPAVLVDVDLFGATKKYDADRFTHLPSMEVMGLRDKQPPGSALVMFFDSKRTWQWLTIDRIAPLGPESVDSVKLRDSSKPSARKAVALSHAAALEYAASPERELHLQESEKLRGIVHMQQQTPSRTRRGQTLPGGGAGLGKGKIPPSHHGTPVRVGGAMDSAPSTQHGKEKAAASGSAAKLGLRTISDDMVRVASAVAAKNTSKRKREDRVVLVTPPRNDSESSDADGGGDAGADTDSGEDESDEEGDVDVSSGNNDEEEEEDGDGDAVSAHKRMRTTQKAEGLCVRNELCMKDDGHIGRCLTKDTRGALRAAALARKKKLARKR* # ORIGINAL: g12927.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 7664 9034 . + . ID=g12927;Name=g12927.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 7664 9034 . + . ID=g12927.t1;Parent=g12927;Name=g12927.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 7664 8305 . + . ID=g12927.t1.exon1;Parent=g12927.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 7664 8305 . + 0 ID=cds.g12927.t1;Parent=g12927.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 8402 9034 . + . ID=g12927.t1.exon2;Parent=g12927.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 8402 9034 . + 0 ID=cds.g12927.t1;Parent=g12927.t1 #PROT g12927.t1 g12927 MASIPNPYKKRSASQRDAAETSTDSPVVVPASILARTPAAAACGTPLEKRMSAPPIAATVPEQPAAKRQKSLHSFFGGTDTTVPQYFCLVWPRQALFLPSLPSELQGGQCLYSKDVEWRDQKKTITLCANVASLEAFAVDGINPVIGRETLYTNASFLKSHLQKCVRRRRGILAMRTALHLMRISMQDFLRRLPIIIIEDAILHRQFPILVWLMVAASKGFVLGKEIIEWLLGLVVLVADGDMRDIAPRTSPSFPLSKVPTSVQDTELKSILYAIQMRRSYGGMAGDMAMLDASAYLWMDRFASTSSKQHTDSIADISVTVQPVDVTSVKPLQVREWELAAIDFHCSNIDSMVLDVAPGVCGGDVGHVRQLIWRFSSSTSRKKTAAYSLPDADDSGESGSDVAEWRAIEPIFKMLAMSILEKSK* # ORIGINAL: g12933.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 26790 27386 . + . ID=g12933;Name=g12933.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 26790 27386 . + . ID=g12933.t1;Parent=g12933;Name=g12933.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 26790 27386 . + . ID=g12933.t1.exon1;Parent=g12933.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 26790 27386 . + 0 ID=cds.g12933.t1;Parent=g12933.t1 #PROT g12933.t1 g12933 MAQVFVIAATNRPDIIDPAMLRPGRLDKLLYVGLPTEAGRASILRTLVLGKPIAEDVDVNVLARDHRCAGMSGADLASLVREACVAALKEAFAADDARASISPEALGAVAAPDALVPVIVSKVHMEAAFRNVQPSVSEKDSARYSAMSGRLRRVRAHVTAGAVADDDAVKSAPHEPMDGVADGAAPPDSAPDAGVSLN* # ORIGINAL: g12932.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 23680 26628 . + . ID=g12932;Name=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 23680 26628 . + . ID=g12932.t1;Parent=g12932;Name=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 23680 23847 . + . ID=g12932.t1.exon1;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 23680 23847 . + 0 ID=cds.g12932.t1;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 24164 25003 . + . ID=g12932.t1.exon2;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 24164 25003 . + 0 ID=cds.g12932.t1;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 25174 26167 . + . ID=g12932.t1.exon3;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 25174 26167 . + 0 ID=cds.g12932.t1;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 26387 26628 . + . ID=g12932.t1.exon4;Parent=g12932.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 26387 26628 . + 2 ID=cds.g12932.t1;Parent=g12932.t1 #PROT g12932.t1 g12932 MGNARKGQRGPAGSSGTHSGAQYVFDRRMIPRVREYIAEQQALGPGKARIDSDSAADYLRRAFPRDYARKARAPFKATVERVLDLIRRLRGGSEEARLLAVEERRRSSMRPDDLSSDDSDSESLDDIPQDGKNESDEEEGAIEFKADGLVAGELSDAIGGAAVEGGVEGDTVCDPTKTPARGMSPVPMALDTPTALSYNPFAGNTRPSGVSGLSGHPTPTQVGGLGSSEGAAAPVTAPRTRPSKRRLDKSHSQRGDVGGSGGSSGASLITRPSVTFADVGGIESCLQEVRELIEWPLTHPEIYSHLGVEPPRGILLHGPPGCGKTMLANAIAGELEVPFLRVSAPEIVSGMSGESEAKIRDLFAQAVEAAPCLVFIDEIDAITPKRETAQREMERRMVAQLLTCMDGLSLENTGGRPVLVIGATNRPDSLDIALRRAGRFDREISIGVPDEAARARILGVVCSKLRLSGDFDFDLLGRKTPGYVGADLSALAKEAAVIAVNRIFHSLWGGDMPVETKDAGHVRDAYTSQPPTREGTPGPVHVSVALRGMVSDRLRAHGGPLSPTQLAQLSITMEDFTMALTKVQPSSKREGFATVPGVTWADVGALEDVRAELKMAILEPIRAPERFAQVGLSAPAGVLLYGPPGCGKTMLAKAIANESGANFISIKGPELLNKYVGESERAVRQVFQRAQASSPCVIFFDELDALCPRRGQSSDSHASERVVNQLLTEMDGLETRRQACRCVMSSI* # PASA_UPDATE: g12931.t1, single gene model update, valid-1, status:[pasa:asmbl_1033,status:12], valid-1 NODE_126_length_37163_cov_40.0764 . gene 18526 20797 . - . ID=g12931;Name=g12931.t1 NODE_126_length_37163_cov_40.0764 . mRNA 18526 20797 . - . ID=g12931.t1;Parent=g12931;Name=g12931.t1 NODE_126_length_37163_cov_40.0764 . exon 19281 20797 . - . ID=g12931.t1.exon1;Parent=g12931.t1 NODE_126_length_37163_cov_40.0764 . CDS 19281 20797 . - 0 ID=cds.g12931.t1;Parent=g12931.t1 NODE_126_length_37163_cov_40.0764 . exon 18526 18982 . - . ID=g12931.t1.exon2;Parent=g12931.t1 NODE_126_length_37163_cov_40.0764 . CDS 18526 18982 . - 1 ID=cds.g12931.t1;Parent=g12931.t1 #PROT g12931.t1 g12931 MATGAWGRGSAGPQGQVQAPSAPPPMSARDLVTGVVWFKSSDLRILDHAPLVAAHAECASVHHVFVFDPRHFRATNRVSLKSSRRRFQFLVDSINDVASSLHVRCVGRAPLHVLVGRPEEALHDFALRNNVTTVYCHEEVTHEEITVLAAVRSALSKIETKKTIVDANGRSGPSALTGPSKREVGGGVRLRSDYWGGTLLEPQQLPFAVADLPFFTAFRKKVEETDLIKRLSESKSPAFTPCQSAVSYSGNPHAPPSRGVLLEGIEAAPTTSARSPDAPPLIDADALWSRLLTLAKTEREQQSGIGGCAVERRGFQCDAGIASSTVSVHPVAVGPTEDEALQSTVSDARSAFPLAGGETAAWERIRHYIGQGEGRLSVYKETRNGMIGLDYSSKLSPYLALGCVSARSVLRAIRQFEVSSGIANESTYWLVFELMWRDYMRFYAHKIGRKLFLLGGAQGRKGREKYPWGADADKLRAWKEGRTGYPFVDANMRELLATGFMSNRGRQNVASFLVRDLGLDWRYGAEHFETHLVDHDPCSNYGNWQYAAGVGADPREDRYFNIVKQAGDYDSNGDYIRTWCPELCRLPTKYLLDIRLLTSTMRAECGISAEVYPLPIIALRGNTNSAGGGHSNNFNNKHNSGNYSNNRKKAEQTGRIR* # PASA_UPDATE: g12930.t1, single gene model update, valid-1, status:[pasa:asmbl_1032,status:12], valid-1 NODE_126_length_37163_cov_40.0764 . gene 15785 17847 . - . ID=g12930;Name=g12930.t1 NODE_126_length_37163_cov_40.0764 . mRNA 15785 17847 . - . ID=g12930.t1;Parent=g12930;Name=g12930.t1 NODE_126_length_37163_cov_40.0764 . five_prime_UTR 17806 17847 . - . ID=g12930.t1.utr5p1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . exon 17332 17847 . - . ID=g12930.t1.exon1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . CDS 17332 17805 . - 0 ID=cds.g12930.t1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . exon 17165 17224 . - . ID=g12930.t1.exon2;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . CDS 17165 17224 . - 0 ID=cds.g12930.t1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . exon 16549 16908 . - . ID=g12930.t1.exon3;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . CDS 16549 16908 . - 0 ID=cds.g12930.t1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . exon 15785 16150 . - . ID=g12930.t1.exon4;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . CDS 16088 16150 . - 0 ID=cds.g12930.t1;Parent=g12930.t1 NODE_126_length_37163_cov_40.0764 . three_prime_UTR 15785 16087 . - . ID=g12930.t1.utr3p1;Parent=g12930.t1 #PROT g12930.t1 g12930 MHNFRRISTLSSTFNCILRRHSSAASPNQSSAMRLITFDDAGAVRRVGVELNKDTVVDLSIADPTLPSSMKGIIAGGADVLTRLRAAVASGRGHVSAQGIALRAPIYDPEKVVCIGMNYADHCHEQNFPIPPEPIIFSKFASAIVGPGDNIIHPDDTNELDFEVELVVVIGTSGRNIKPADAYSHIFGYTVAHDVSARDWQLKRNGGQWLAGKTYDTFAPIGPAIVTADAIGDPHRLGIRCRVNGNIVQNSNTNQLIHRVPELVSFVSGFVTLKPGDLILTGTPPGVGCFRKPPMWLKRGDTVECEIDEIGTISNTVC* # ORIGINAL: g12936.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 35612 36456 . - . ID=g12936;Name=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 35612 36456 . - . ID=g12936.t1;Parent=g12936;Name=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 36304 36456 . - . ID=g12936.t1.exon1;Parent=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 36304 36456 . - 0 ID=cds.g12936.t1;Parent=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 35844 35957 . - . ID=g12936.t1.exon2;Parent=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 35844 35957 . - 0 ID=cds.g12936.t1;Parent=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 35612 35635 . - . ID=g12936.t1.exon3;Parent=g12936.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 35612 35635 . - 0 ID=cds.g12936.t1;Parent=g12936.t1 #PROT g12936.t1 g12936 MRVQLSFLEWLGSEARLCDYSGEYLCTDCHWNDRQIIPARALHNWDFKPRKVSRASKAMLALMFTRPVLDLEHLNPQLFRYLEELAEVKALCIFGG* # ORIGINAL: g12925.t1 original gene structure, not modified by PASA NODE_126_length_37163_cov_40.0764 AUGUSTUS gene 145 2352 . - . ID=g12925;Name=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS mRNA 145 2352 . - . ID=g12925.t1;Parent=g12925;Name=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 2134 2352 . - . ID=g12925.t1.exon1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 2134 2352 . - 0 ID=cds.g12925.t1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 1769 1956 . - . ID=g12925.t1.exon2;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 1769 1956 . - 0 ID=cds.g12925.t1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 1342 1495 . - . ID=g12925.t1.exon3;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 1342 1495 . - 1 ID=cds.g12925.t1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 1030 1122 . - . ID=g12925.t1.exon4;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 1030 1122 . - 0 ID=cds.g12925.t1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 598 747 . - . ID=g12925.t1.exon5;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 598 747 . - 0 ID=cds.g12925.t1;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS exon 145 342 . - . ID=g12925.t1.exon6;Parent=g12925.t1 NODE_126_length_37163_cov_40.0764 AUGUSTUS CDS 145 342 . - 0 ID=cds.g12925.t1;Parent=g12925.t1 #PROT g12925.t1 g12925 MSHYNFKKIQVVPTAKDFIDIVLSKTQRKTPTVIHKGYAITRIRGFYLRKVKFTAQTYHDKLQLIIEEFPKLDDIHPFYADLMNVLYDKDHYKLALGQINQALHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMCTIMKGQNTSLQYLEQVRQHLARLPSIDPNTRTLILTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHMDYKNLRWQVIDTPGILDHPLEERNTIEMQSITALAHLRAAVLYIMDLSEQCGHSIAEQVMLFNSIRPLFANKPVMLVCNKIDVVRPEQLTEDQRAALQALLDDGVDMVPMSNLTEEGVIQVKTS # PASA_UPDATE: g12926.t1, single gene model update, valid-1, status:[pasa:asmbl_1027,status:13],[pasa:asmbl_1030,status:12],[pasa:asmbl_1031,status:12], valid-1 NODE_126_length_37163_cov_40.0764 . gene 2872 7363 . - . ID=g12926;Name=g12926.t1 NODE_126_length_37163_cov_40.0764 . mRNA 2872 7363 . - . ID=g12926.t1;Parent=g12926;Name=g12926.t1 NODE_126_length_37163_cov_40.0764 . five_prime_UTR 7202 7363 . - . ID=g12926.t1.utr5p1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 7191 7363 . - . ID=g12926.t1.exon1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 7191 7201 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 6943 7033 . - . ID=g12926.t1.exon2;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 6943 7033 . - 1 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 6233 6811 . - . ID=g12926.t1.exon3;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 6233 6811 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 5016 5864 . - . ID=g12926.t1.exon4;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 5016 5864 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 4181 4783 . - . ID=g12926.t1.exon5;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 4181 4783 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 3706 4008 . - . ID=g12926.t1.exon6;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 3706 4008 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . exon 2872 3556 . - . ID=g12926.t1.exon7;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . CDS 3437 3556 . - 0 ID=cds.g12926.t1;Parent=g12926.t1 NODE_126_length_37163_cov_40.0764 . three_prime_UTR 2872 3436 . - . ID=g12926.t1.utr3p1;Parent=g12926.t1 #PROT g12926.t1 g12926 MSHSTYDKQWRQANLELQDVLELEDPKDAVLRPTDKESTFQQLAVLYVRYIQILRKLEEAYDQIVHPQKRRTIRKVLTGVIGRIIELKEAMVEVTASEYLYFDDILADLKLTPLDIEIPIPQYFLDENAKELKEREKTLDSLVAKRESTNEEEAEIEAEITFEEAIAIIQVNERARQGRLRAKFMREIRQQEERERKARNRVQPAMEPEEAAVIIQKHFKGFRTRKLTKAMTNEELVFVGMAVAEGTPKSKALLSAKATMTRRKAVRDQHELEYQQALVGVKQKLREVEGPDMKENMQDQIRQWFIETRDATGKFPDYPGETEGGSGRIFGRMPDSEKDKDGDGGEDGKKKKDDRAASAAGKKAPAKAPAKKGGDGKGKKGKTDEDAEQEAEMLKKLAQSKFVAPVREGVTEYSEMWSRRDEVSNFTQKHDVEIIKEEKRLEIEAEIRIQVDELMREELKNLKAAVDRDKAGPKTKKKGGKKGGKSSGKKKGSGKKASAKKGSAKKKKGKGSGKKGKKEKDLTSTRTIESLYEELVENSIIKKANKVRLADYVGDHTYLGTNLTRNKIEPNPSMADVRRLLTEVAILPLGTAEVRESVFHLKSMLLCGPKGCGKRMLAHAIATETGSNLFDLTPKNTAGRYTGKGGVSMMLHIVFKLARILQPSVILIDDAEMVTAKKVPKDDQTDPKRIFKEMGKYIKKMKPSDRILIIGKLISMYQKIVMVPRPDYASRLNIWPTLIEREGGKITEALDFHALAKITEGYTAGHLSLVVRDVLTDRRIQKLGERPLASSEFIPPLAKLDPIYKEEEEAFKTWFSKTPLGRKRAKSAATENEGDDDPKGKKGNAKGKKKK* # PASA_UPDATE: g12934.t1, single gene model update, valid-1, status:[pasa:asmbl_1034,status:12], valid-1 NODE_126_length_37163_cov_40.0764 . gene 27748 30619 . - . ID=g12934;Name=g12934.t1 NODE_126_length_37163_cov_40.0764 . mRNA 27748 30619 . - . ID=g12934.t1;Parent=g12934;Name=g12934.t1 NODE_126_length_37163_cov_40.0764 . exon 28748 30619 . - . ID=g12934.t1.exon1;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . CDS 28748 30619 . - 0 ID=cds.g12934.t1;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . exon 28252 28478 . - . ID=g12934.t1.exon2;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . CDS 28252 28478 . - 0 ID=cds.g12934.t1;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . exon 27748 28095 . - . ID=g12934.t1.exon3;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . CDS 27786 28095 . - 1 ID=cds.g12934.t1;Parent=g12934.t1 NODE_126_length_37163_cov_40.0764 . three_prime_UTR 27748 27785 . - . ID=g12934.t1.utr3p1;Parent=g12934.t1 #PROT g12934.t1 g12934 MDIQPPTASAGSAPASSLPSQALLCARVAPERDAGIDVSTFRRDALLACVADLRRHGLALGDCVAVSAAGGVGVGHVGHVAAVGVVFPSKQLRAGAVAMTPIMRLNAGVGIGDSVVISRIPDALLTCVRVTVRFDAEEDGAGSDGAVMAHVAAQMEDRVISIGSRYRIGLYGRTRQFQIVSVDAPPLVSLSRSNSIDSPSSPFYRTSRQTKYIPASDASRPPAVPSAQTDNASRARIVGGLATQMAAIREVVELPLTRPELYARLGLPRPRGVLLYGPPGTGKTLIARSVASECKCHVVCVNGPELVSKFYGETEANLRAVFAEAASKAPAIVFIDEIDAICPRREDGKGESEKRVVGTLLTLMDGAEEKSSGGDHRDGGDQSGAASSPSRPPPPHVVVIGATNRVNSLDPALRRPGRFDVEIEIGIPSASARLDILHVLMRDIPHSVAPDDLEAVAARTHGYVGADIAALVKEAALCALKRSCVPTPRMGGEAADMETVVTEAVVTTDDLHAAAAAIAPSAMREVAVEVPTVRWDDIGGQAETKQRLREAVEWPLRHPDAFVRMGVRPPKGILLYGPPGCSKTLMAKALATESGLNFIAVKGPQLFSKWVGESERAVREVFRKARAASPSIVFFDEIDSMAGARSDGGSSGGGVFDRVLSQLLSELDGIEARGHVTVVAATNRPDLIDKALLRPGRIDRMIYVAPPDEPARDAIFRIALRRTPLDASVSIASLATASAGRSGAEIGAICREAALCAMEDDLGASTVTAAHFARAMKRIPGQITDAMLQFYDNYRTKFGTRG* # ORIGINAL: g2802.t1 original gene structure, not modified by PASA NODE_18070_length_198_cov_45.7642_potentialcontaminant AUGUSTUS gene 2 198 . + . ID=g2802;Name=g2802.t1 NODE_18070_length_198_cov_45.7642_potentialcontaminant AUGUSTUS mRNA 2 198 . + . ID=g2802.t1;Parent=g2802;Name=g2802.t1 NODE_18070_length_198_cov_45.7642_potentialcontaminant AUGUSTUS exon 2 198 . + . ID=g2802.t1.exon1;Parent=g2802.t1 NODE_18070_length_198_cov_45.7642_potentialcontaminant AUGUSTUS CDS 2 198 . + 2 ID=cds.g2802.t1;Parent=g2802.t1 #PROT g2802.t1 g2802 KGGLFTINMCGKRTTIVSDPRLHSYFFSPRNEILSPREVYAFMTPVFGEGVAYGASYARMREQLG # ORIGINAL: g3623.t1 original gene structure, not modified by PASA NODE_4311_length_1838_cov_36.3142 AUGUSTUS gene 885 1659 . + . ID=g3623;Name=g3623.t1 NODE_4311_length_1838_cov_36.3142 AUGUSTUS mRNA 885 1659 . + . ID=g3623.t1;Parent=g3623;Name=g3623.t1 NODE_4311_length_1838_cov_36.3142 AUGUSTUS exon 885 1185 . + . ID=g3623.t1.exon1;Parent=g3623.t1 NODE_4311_length_1838_cov_36.3142 AUGUSTUS CDS 885 1185 . + 0 ID=cds.g3623.t1;Parent=g3623.t1 NODE_4311_length_1838_cov_36.3142 AUGUSTUS exon 1505 1659 . + . ID=g3623.t1.exon2;Parent=g3623.t1 NODE_4311_length_1838_cov_36.3142 AUGUSTUS CDS 1505 1659 . + 2 ID=cds.g3623.t1;Parent=g3623.t1 #PROT g3623.t1 g3623 MARNKKRPIVEVEPSSEEEEDVADEVQDASSSDAPAETECTTPAATDEQKEDAEDDTDDDGAEVSFTQLGLGKWLADQCLSVGLNRPTEIQRNCIPPILQGRDCIGCAKTGSGKTAAFALPILQQLAADPFGIYCLVLTPTRCVRVACIAV* # ORIGINAL: g4473.t1 original gene structure, not modified by PASA NODE_996_length_14951_cov_42.6259 AUGUSTUS gene 9931 10991 . + . ID=g4473;Name=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS mRNA 9931 10991 . + . ID=g4473.t1;Parent=g4473;Name=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 9931 10072 . + . ID=g4473.t1.exon1;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 9931 10072 . + 0 ID=cds.g4473.t1;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 10230 10310 . + . ID=g4473.t1.exon2;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 10230 10310 . + 2 ID=cds.g4473.t1;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 10453 10556 . + . ID=g4473.t1.exon3;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 10453 10556 . + 2 ID=cds.g4473.t1;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 10842 10991 . + . ID=g4473.t1.exon4;Parent=g4473.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 10842 10991 . + 0 ID=cds.g4473.t1;Parent=g4473.t1 #PROT g4473.t1 g4473 MVGGSTVVLGASSTSMHLAAHSPQPHYRATSVPICIGDRVIVKGHGPGVVKFVGTLSEDYITDAFYVGVKLDTPDPSRHDGVVRGKRYFSCTPGHGILVKSRNVALVQKPGAGPVSVAAFEGGSGAASVGPLNNKRHGGSTATAGIVGRRPAVLRTTV* # PASA_UPDATE: g4472.t1, single gene model update, valid-1, status:[pasa:asmbl_10261,status:3], valid-1 NODE_996_length_14951_cov_42.6259 . gene 8041 9430 . + . ID=g4472;Name=g4472.t1 NODE_996_length_14951_cov_42.6259 . mRNA 8041 9430 . + . ID=g4472.t1;Parent=g4472;Name=g4472.t1 NODE_996_length_14951_cov_42.6259 . five_prime_UTR 8041 8112 . + . ID=g4472.t1.utr5p1;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . exon 8041 8318 . + . ID=g4472.t1.exon1;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . CDS 8113 8318 . + 0 ID=cds.g4472.t1;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . exon 8462 8531 . + . ID=g4472.t1.exon2;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . CDS 8462 8531 . + 1 ID=cds.g4472.t1;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . exon 8622 9430 . + . ID=g4472.t1.exon3;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . CDS 8622 9335 . + 0 ID=cds.g4472.t1;Parent=g4472.t1 NODE_996_length_14951_cov_42.6259 . three_prime_UTR 9336 9430 . + . ID=g4472.t1.utr3p1;Parent=g4472.t1 #PROT g4472.t1 g4472 MKSGVKRKDVRTVTSVLLDGKGDGHVEDLPVEETKASGEAHPHPHTHKSVVTGCCAHEIPEYYRQRFILSGYRAPTGSLLTTAKTLFAIHNETVNIWSHFLSALIALVMYATTLRSLWSDGASIDRIAAFTVFFLCASACFVCSSLYHLFNCCSFHVYRKVMTLDYLGIFVHIMGAFISGLHFAFFCFPLYRTLYQAAIFTLCTVGIAMAVTPKFDSPQFRMWRIGVYVLVVSFAVLPLLHGLYLVGLAETAHWWGMIGVFSLGTVFYATQFPEKSFPGKFDIWLSSHQIWHLMVCLGTLYHYFNICRFYMRTVDGCDAFLAEVYSSEA* # PASA_UPDATE: g4471.t1, single gene model update, valid-1, status:[pasa:asmbl_10265,status:3], valid-1 NODE_996_length_14951_cov_42.6259 . gene 6324 7443 . - . ID=g4471;Name=g4471.t1 NODE_996_length_14951_cov_42.6259 . mRNA 6324 7443 . - . ID=g4471.t1;Parent=g4471;Name=g4471.t1 NODE_996_length_14951_cov_42.6259 . five_prime_UTR 7414 7443 . - . ID=g4471.t1.utr5p1;Parent=g4471.t1 NODE_996_length_14951_cov_42.6259 . exon 6832 7443 . - . ID=g4471.t1.exon1;Parent=g4471.t1 NODE_996_length_14951_cov_42.6259 . CDS 6832 7413 . - 0 ID=cds.g4471.t1;Parent=g4471.t1 NODE_996_length_14951_cov_42.6259 . exon 6324 6514 . - . ID=g4471.t1.exon2;Parent=g4471.t1 NODE_996_length_14951_cov_42.6259 . CDS 6434 6514 . - 0 ID=cds.g4471.t1;Parent=g4471.t1 NODE_996_length_14951_cov_42.6259 . three_prime_UTR 6324 6433 . - . ID=g4471.t1.utr3p1;Parent=g4471.t1 #PROT g4471.t1 g4471 MEPTDSDETQDTFDVFRPSLRDHALMCDLRVLATRSPKGVYVMPSFDAMQQWFGVIFVRSGLYAEGVFRFKLLFQDTFPNSWPIVRFMSQVFHPQINDSGFLVTPPEWNGPVRLWTVLEHIHHHMYSIEVANASNVDAAHQYESNPELFQTNAIRCVKESLDRRYLNPTEPGNSLRFSEWRPEIHEPCVIAVREGKGFDEVEAPTLMDIAKSEFSRLFTG* # PASA_UPDATE: g4474.t1, single gene model update, valid-1, status:[pasa:asmbl_10264,status:12], valid-1 NODE_996_length_14951_cov_42.6259 . gene 12100 14867 . - . ID=g4474;Name=g4474.t1 NODE_996_length_14951_cov_42.6259 . mRNA 12100 14867 . - . ID=g4474.t1;Parent=g4474;Name=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 14745 14867 . - . ID=g4474.t1.exon1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 14745 14867 . - 0 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 13952 14428 . - . ID=g4474.t1.exon2;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 13952 14428 . - 0 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 13570 13700 . - . ID=g4474.t1.exon3;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 13570 13700 . - 0 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 13102 13246 . - . ID=g4474.t1.exon4;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 13102 13246 . - 1 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 12639 12866 . - . ID=g4474.t1.exon5;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 12639 12866 . - 0 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . exon 12100 12349 . - . ID=g4474.t1.exon6;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . CDS 12164 12349 . - 0 ID=cds.g4474.t1;Parent=g4474.t1 NODE_996_length_14951_cov_42.6259 . three_prime_UTR 12100 12163 . - . ID=g4474.t1.utr3p1;Parent=g4474.t1 #PROT g4474.t1 g4474 MDIDISAVFATPKPALTNAEADAVFAAGKNRLEKMECFVLEGKKFVRLPKTEYGHFYREDCYVFLCTYWKEPDHVPEPTPDDGEEEEPEDEIECIVYFWEGTASGKMGWLTFTFGFEREIEALVKNNFGCELRVIRTWQQRESNDFLSHFEGKILVHSGRRPPAKKAVAQPSTSAPPAKGSKASQKSAASAEKLPVELFQVRRGADKLCTRTIQVEATASSLCSSDCFVLRVPFDNSKSGIVYVWIGSQAPKDLVPVVEQIAMQVKDSGFSMQTVAEGMEPENFFWVALGGRGGYDKRTAPRPALPRMFKSSNDNGTFTIRDIGFKFCQQDLLDGEVAILDDGDGRTFVWVGPNVLEVEKKLAIRSARIYSRHLERDAEKAVIVVDKYSEPPEFRWCFHGWVPFVRAEVKAAKGAFTREQLDTLQHAAH* # ORIGINAL: g4468.t1 original gene structure, not modified by PASA NODE_996_length_14951_cov_42.6259 AUGUSTUS gene 116 655 . - . ID=g4468;Name=g4468.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS mRNA 116 655 . - . ID=g4468.t1;Parent=g4468;Name=g4468.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 475 655 . - . ID=g4468.t1.exon1;Parent=g4468.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 475 655 . - 0 ID=cds.g4468.t1;Parent=g4468.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 116 306 . - . ID=g4468.t1.exon2;Parent=g4468.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 116 306 . - 2 ID=cds.g4468.t1;Parent=g4468.t1 #PROT g4468.t1 g4468 MHGRSAVTLTLGSRIFYSNSFCGVTTLVMGDVTYGACCVDDYTARALGADLMVHYGHSCLVNWLGCPNLRESAVPIDATEIKMLYVFVDIKIDTQHLVETLRHNFPAGSRLALVSTIQFVTALQ # PASA_UPDATE: g4469.t1, single gene model update, valid-1, status:[pasa:asmbl_10260,status:3], valid-1 NODE_996_length_14951_cov_42.6259 . gene 1724 3972 . + . ID=g4469;Name=g4469.t1 NODE_996_length_14951_cov_42.6259 . mRNA 1724 3972 . + . ID=g4469.t1;Parent=g4469;Name=g4469.t1 NODE_996_length_14951_cov_42.6259 . five_prime_UTR 1724 1860 . + . ID=g4469.t1.utr5p1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . exon 1724 2030 . + . ID=g4469.t1.exon1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . CDS 1861 2030 . + 0 ID=cds.g4469.t1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . exon 2121 2967 . + . ID=g4469.t1.exon2;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . CDS 2121 2967 . + 1 ID=cds.g4469.t1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . exon 3176 3280 . + . ID=g4469.t1.exon3;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . CDS 3176 3280 . + 0 ID=cds.g4469.t1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . exon 3504 3660 . + . ID=g4469.t1.exon4;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . CDS 3504 3660 . + 0 ID=cds.g4469.t1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . exon 3819 3972 . + . ID=g4469.t1.exon5;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . CDS 3819 3919 . + 2 ID=cds.g4469.t1;Parent=g4469.t1 NODE_996_length_14951_cov_42.6259 . three_prime_UTR 3920 3972 . + . ID=g4469.t1.utr3p1;Parent=g4469.t1 #PROT g4469.t1 g4469 MDAYDRKALIDVIDWHKARKDAKTTAPTAEGGGYFGWIWSCVPQSVVDYSTSAVSRALLSVETYAMDAAALAAIDEYMRTFAVSKGIQGGDISRLTLQHRDEIAASYCSPAAIAAFLQGAGLGLGGVFFVAADIPMLIAINCLMLAKVSRVYGVSASADCNANVVLRLLAAGIGSIALPVFEEEGDKLRVELQGELRVRLDRIQARINQLIVGSKDACVGTDDGTVDGSTGASSSPPDADAASLPSSQDESAGSTAGEGGDGECADTVDDQADVRGKDAPATESSPLQAPGNTPAGSELNDGPTTASRIGSAVVDAVQTVGRTVVEELRQDVMVELVKQLSTFLGLHFARSKMMQVVPLVGVAVGAGSNYWFTVRCTEAAVMTLRHHYLRSEHPEAVLAAHEEGSGWDWQVVDGADVGEDDCVHGNVALSAGVADASTQFFAAGQQVPDVEKKLDLPVG* # ORIGINAL: g4470.t1 original gene structure, not modified by PASA NODE_996_length_14951_cov_42.6259 AUGUSTUS gene 4376 5715 . - . ID=g4470;Name=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS mRNA 4376 5715 . - . ID=g4470.t1;Parent=g4470;Name=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 5624 5715 . - . ID=g4470.t1.exon1;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 5624 5715 . - 0 ID=cds.g4470.t1;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 5467 5533 . - . ID=g4470.t1.exon2;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 5467 5533 . - 1 ID=cds.g4470.t1;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 5207 5326 . - . ID=g4470.t1.exon3;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 5207 5326 . - 0 ID=cds.g4470.t1;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS exon 4376 5035 . - . ID=g4470.t1.exon4;Parent=g4470.t1 NODE_996_length_14951_cov_42.6259 AUGUSTUS CDS 4376 5035 . - 0 ID=cds.g4470.t1;Parent=g4470.t1 #PROT g4470.t1 g4470 MFSQWASKASRIGSRQLLVSAFVRQNQTAAPAMREIGRLSTEQSLKNPYKPGQFFIHRNFGYRGIVLDTWKAEIFDHDARNRAHLLDDIRDTPVICNKSDATTPEFGQHHYRYVRHTDIIPYEDSQPEQFEHDQFRSLFVVSRNGQDAPVCEPTVGLAQLRDRNANLFKYSNVHSQTSGNVRVTAVPFWLGFYHEGNNYWWIYQITIEHLGGPPVRLQRRTWTVTSGRGAQRTTRTLGGEGVVGLTPTLGADRKVFEYMSNVDLPMPGGSMEGEYTFIDENGEPLKVAVPKFTLNGAYEPPRATSTDRLTPS* # ORIGINAL: g1433.t1 original gene structure, not modified by PASA NODE_6230_length_611_cov_129.897 AUGUSTUS gene 1 519 . - . ID=g1433;Name=g1433.t1 NODE_6230_length_611_cov_129.897 AUGUSTUS mRNA 1 519 . - . ID=g1433.t1;Parent=g1433;Name=g1433.t1 NODE_6230_length_611_cov_129.897 AUGUSTUS exon 1 519 . - . ID=g1433.t1.exon1;Parent=g1433.t1 NODE_6230_length_611_cov_129.897 AUGUSTUS CDS 1 519 . - 0 ID=cds.g1433.t1;Parent=g1433.t1 #PROT g1433.t1 g1433 MSYKTARETIMKSEKIDVIQIARSSNYQVMVTTGDPDLSDEFVEAFKGLPDPECCTAGGRLAVSPCAALCDRYDEMVEKFGMFYASEVSLGVKVYRRMTITRAFLENMERMEMGVKSSVDYGAGGVSLASKLSVTIQQQAKDMKDEKSVSQSWYIFGGDPSKATFDPENFDDV # ORIGINAL: g3117.t1 original gene structure, not modified by PASA NODE_5784_length_718_cov_152.37_potentialcontaminant AUGUSTUS gene 2 718 . + . ID=g3117;Name=g3117.t1 NODE_5784_length_718_cov_152.37_potentialcontaminant AUGUSTUS mRNA 2 718 . + . ID=g3117.t1;Parent=g3117;Name=g3117.t1 NODE_5784_length_718_cov_152.37_potentialcontaminant AUGUSTUS exon 2 718 . + . ID=g3117.t1.exon1;Parent=g3117.t1 NODE_5784_length_718_cov_152.37_potentialcontaminant AUGUSTUS CDS 2 718 . + 1 ID=cds.g3117.t1;Parent=g3117.t1 #PROT g3117.t1 g3117 GAPPKPSLESLASWLSEQRGINNEFVGDFNKFLDSESNEWMRWFDPMASGSFGKIAKEWRLKTGLKTEFEEAPIDFNELSAVGRKGALEAYTEIWGKSITGGTATLRAEKAEAVKRYVDRMIKERGPASYDPLALNKSPDFVQELEKEWSDIVGVRTYGDFIATYEYLLAGVVRITRERKLYGTPRGLLFKLPNHLRVLDCCGADGNSSLAGLAGGSSLAGLARGCFGGCPSLAGGGV # PASA_UPDATE: g1009.t1, single gene model update, valid-1, status:[pasa:asmbl_10046,status:12], valid-1 NODE_938_length_15721_cov_47.5738 . gene 10071 12225 . + . ID=g1009;Name=g1009.t1 NODE_938_length_15721_cov_47.5738 . mRNA 10071 12225 . + . ID=g1009.t1;Parent=g1009;Name=g1009.t1 NODE_938_length_15721_cov_47.5738 . five_prime_UTR 10071 10273 . + . ID=g1009.t1.utr5p1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . exon 10071 10409 . + . ID=g1009.t1.exon1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . CDS 10274 10409 . + 0 ID=cds.g1009.t1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . exon 10719 10864 . + . ID=g1009.t1.exon2;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . CDS 10719 10864 . + 2 ID=cds.g1009.t1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . exon 11211 11300 . + . ID=g1009.t1.exon3;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . CDS 11211 11300 . + 0 ID=cds.g1009.t1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . exon 11811 12002 . + . ID=g1009.t1.exon4;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . CDS 11811 12002 . + 0 ID=cds.g1009.t1;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . exon 12205 12225 . + . ID=g1009.t1.exon5;Parent=g1009.t1 NODE_938_length_15721_cov_47.5738 . CDS 12205 12225 . + 0 ID=cds.g1009.t1;Parent=g1009.t1 #PROT g1009.t1 g1009 MASPLEQQAEELEVLRSIYGDDPNFKELSPNSLGFMITPPEDADKGDAARTVYLEVTWPPLYPDEVPVLSLNAFFNKDIRGEAKKAMVDALTKQAVDNIGVQMTYTLVDWLKEHLDGLLDGAYALPAVSNETKATAAAETPAHDDHETTKDAAAKKEKLSKRQKAKLADRIDAQGHLQRGFDWVDLVKLVLLLF* # PASA_UPDATE: g1008.t1, single gene model update, valid-1, status:[pasa:asmbl_10045,status:3], valid-1 NODE_938_length_15721_cov_47.5738 . gene 3943 9612 . + . ID=g1008;Name=g1008.t1 NODE_938_length_15721_cov_47.5738 . mRNA 3943 9612 . + . ID=g1008.t1;Parent=g1008;Name=g1008.t1 NODE_938_length_15721_cov_47.5738 . five_prime_UTR 3943 4176 . + . ID=g1008.t1.utr5p1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 3943 4199 . + . ID=g1008.t1.exon1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 4177 4199 . + 0 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 4463 5111 . + . ID=g1008.t1.exon2;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 4463 5111 . + 1 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 5468 5950 . + . ID=g1008.t1.exon3;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 5468 5950 . + 0 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 6347 6497 . + . ID=g1008.t1.exon4;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 6347 6497 . + 0 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 6640 6786 . + . ID=g1008.t1.exon5;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 6640 6786 . + 2 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 6965 7125 . + . ID=g1008.t1.exon6;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 6965 7125 . + 2 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 7409 7546 . + . ID=g1008.t1.exon7;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 7409 7546 . + 0 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 7922 8142 . + . ID=g1008.t1.exon8;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 7922 8142 . + 0 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 8384 8485 . + . ID=g1008.t1.exon9;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 8384 8485 . + 1 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . exon 8664 9612 . + . ID=g1008.t1.exon10;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . CDS 8664 9426 . + 1 ID=cds.g1008.t1;Parent=g1008.t1 NODE_938_length_15721_cov_47.5738 . three_prime_UTR 9427 9612 . + . ID=g1008.t1.utr3p1;Parent=g1008.t1 #PROT g1008.t1 g1008 MPRSSSSSSSGSDRSSHAGSPSRAKSPSPSKKDDDKKESAATAKSANTDDVKSRDDRRGRRRRDSSGSRRSRSSSRSSRSRSRSRSRSNGRGRGRDRDNYRRRRRSRSRSRSSSRSDSESRGRRGDGCRKAGDLRDVLNERKAQRGDGRGDGGRSRAPAEDRRPARDRPKKDEDVTLTTRTGGTYIPPARLRLMQTEVGDKGSVAYQRMTWDALKKSINGLVNKVNIGNLRNIAVELFGENLVRGRGLFSRSLMRAQLASPTFTPVYAALLSVINTKFPQIGELVIKRLVLQYRRSFKRNDQATCIASAKFLAHLVNQHVAHEVVALQILTVLLERPTDDSVEVAVGFIKDIGQALTEDSPKGLAAIYDRLRAILHEGQIDKRVQYVIEVAFAVRKDGFKEHVRIPEGLDVVEDDDQITHLVSLDDETIAAEDVLDVFKADPEFQLNEERYRKIKAEILGDDLDSESGDGDGDESSGEDESEEEEAAESKPTTTEIIDETQTNNVNLRRTIYLTVMSSASFEECAHKLMKLSLKPGQEMEICSMIIECCSQERSYLSFYGLLAERFCRINRVYQENFDLCFQQQYNLIHRLETNRLRNVARLFAHVLYSDAMPWNMLSIIHLNEDETTSSSRIFIKILVQEMASAMGLPKLAERFKDPTMAEPFSGLFPKDNPRNTRFAINFFTSIGLGGLTDDLREHLKIAPKLIMAQKQQVESSDSDSSSSSSSSSSSDSSSSDSSSDSSSSSGSSRGRSKAKATSKGSKGAAPAPDRTKTKENVDGCPNKANKFHECTEYCKKRWEAPPPRESAREPADRSRERTDDRARDGPSSRDVISDRARGSRGRDKSPSPKIREDERGHDRSRDAGRRERDGDRRDERDGRRDEARDARRGDDRREDGRRDERGRDERGSGRDERGRDDRKGVDDSRKRRRDSGSGSEGERGRKARA* # ORIGINAL: g1010.t1 original gene structure, not modified by PASA NODE_938_length_15721_cov_47.5738 AUGUSTUS gene 13427 14845 . + . ID=g1010;Name=g1010.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS mRNA 13427 14845 . + . ID=g1010.t1;Parent=g1010;Name=g1010.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 13427 14845 . + . ID=g1010.t1.exon1;Parent=g1010.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 13427 14845 . + 0 ID=cds.g1010.t1;Parent=g1010.t1 #PROT g1010.t1 g1010 MASFSSLSIEVVVTHVAPLLCNKDLASLAWVNSVLRNGLRLQCVYNLSPAFSKQYWESAEFCDAVCAQIPHDRLGLDLNSVDSVSGDLSVLGGVHSLILSACNGVTDVSALGGAHTLNLSGCTRVTDVSALGGVHTLDLSRCYGVTDVSALGGVHSLNLSFCYYGVTDVSALGGIHSLNLSACDGVTDVSALGGVHSLNLSGCTRVMDVSALGGVHSLNLSFCYRVTDVSALGGVHTLNLSACNGVTDVSALGGVHTLNLSGCTGVTYVSALGGVHTLDLSRCYEVTVVSALDGVHTLNLSGCTRVTDVSALGGVHTLDLSRCYEVTDVSALGGVHSLNLSECSEVTDESALGGVHSLKLAACKSVTNVSALGGVHSISLYECIRVTDVSALGGVHSLDLSYCYRVTDVSTLGVVHSLNLSGCTRVTDVSALGGVHTLNLSGCTRVTDLSALGGVHMLDLSSRCYEVTDVSA* # ORIGINAL: g1007.t1 original gene structure, not modified by PASA NODE_938_length_15721_cov_47.5738 AUGUSTUS gene 76 3289 . - . ID=g1007;Name=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS mRNA 76 3289 . - . ID=g1007.t1;Parent=g1007;Name=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 2652 3289 . - . ID=g1007.t1.exon1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 2652 3289 . - 0 ID=cds.g1007.t1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 2014 2318 . - . ID=g1007.t1.exon2;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 2014 2318 . - 1 ID=cds.g1007.t1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 1624 1732 . - . ID=g1007.t1.exon3;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 1624 1732 . - 2 ID=cds.g1007.t1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 1145 1304 . - . ID=g1007.t1.exon4;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 1145 1304 . - 1 ID=cds.g1007.t1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 548 743 . - . ID=g1007.t1.exon5;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 548 743 . - 0 ID=cds.g1007.t1;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS exon 76 197 . - . ID=g1007.t1.exon6;Parent=g1007.t1 NODE_938_length_15721_cov_47.5738 AUGUSTUS CDS 76 197 . - 2 ID=cds.g1007.t1;Parent=g1007.t1 #PROT g1007.t1 g1007 MSSPQRAQNKKKGGKGQGQGQGQGQQPDLNKQLQKKSKESDDESDVSSLRATSALQSPSETPGTSGDAANAGDDQAEVLNTSSSSSLGASSSAFSTPTKGIITPVKDAAMSDDSARGLRNRKKLDFERTVSANSKLAESPSVERIKLSEAGGSSALSPLRRARAVSWADTTGHMIPPYADGDSTLLSWAILAGLTVASFALRFYRLSEPHYVVFDEVHFGKFASYYIRGTYFFDVHPPLAKLLLALTAYISGNDGSFLYENIGMDYHEHKVNYMPLRSIVAFFGALLTPLAYVTVRGMGYSTAVSFVAGVFVLFDNAMVTQCRFVLLDAFLLFFTMATIACLAKFVNCAGRPFSVSWWLCLALTGLFMGMAVSVKYVGLFVVAIVGVHTIVDLWNIYGNHSVTLPRFGGHFSGRALCLIALPAIVYCSTFAVHLWALPRSGPGDSFMSMPFLAGIEGTDADKLVRNQPQFVSYGMWITIKADDSKCWLHSHKDKYPLRYDDGRVSSQQSQ # PASA_UPDATE: g4061.t1, single gene model update, valid-1, status:[pasa:asmbl_10112,status:3], valid-1 NODE_955_length_15517_cov_44.5677 . gene 7355 9099 . - . ID=g4061;Name=g4061.t1 NODE_955_length_15517_cov_44.5677 . mRNA 7355 9099 . - . ID=g4061.t1;Parent=g4061;Name=g4061.t1 NODE_955_length_15517_cov_44.5677 . five_prime_UTR 9036 9099 . - . ID=g4061.t1.utr5p1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 8996 9099 . - . ID=g4061.t1.exon1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 8996 9035 . - 0 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 8868 8894 . - . ID=g4061.t1.exon2;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 8868 8894 . - 2 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 8599 8757 . - . ID=g4061.t1.exon3;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 8599 8757 . - 2 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 8228 8295 . - . ID=g4061.t1.exon4;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 8228 8295 . - 2 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 7848 7957 . - . ID=g4061.t1.exon5;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 7848 7957 . - 0 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . exon 7355 7629 . - . ID=g4061.t1.exon6;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . CDS 7533 7629 . - 1 ID=cds.g4061.t1;Parent=g4061.t1 NODE_955_length_15517_cov_44.5677 . three_prime_UTR 7355 7532 . - . ID=g4061.t1.utr3p1;Parent=g4061.t1 #PROT g4061.t1 g4061 MENTLKAVAIGLAVPQTAEEVAVAPTSAAPVEAASPAEKSVASKASEYVDLDVIFNAIKPVANEITLGSISGFCTGYAAKKLGKAAAFVIGLGFLGIQGAAYSGYINVNWLKVQKDLIKALDTNEDGKIDSHEMKHYMEKAVTIARYQMPTSTGFVAGLLVGIRSG* # ORIGINAL: g4062.t2 original gene structure, not modified by PASA # ORIGINAL: g4062.t1 original gene structure, not modified by PASA NODE_955_length_15517_cov_44.5677 AUGUSTUS gene 9933 12884 . + . ID=g4062;Name=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS mRNA 9933 12884 . + . ID=g4062.t2;Parent=g4062;Name=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 9933 10163 . + . ID=g4062.t2.exon1;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 9933 10163 . + 0 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10258 10480 . + . ID=g4062.t2.exon2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10258 10480 . + 0 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10635 10768 . + . ID=g4062.t2.exon3;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10635 10768 . + 2 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10997 11060 . + . ID=g4062.t2.exon4;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10997 11060 . + 0 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 11441 11523 . + . ID=g4062.t2.exon5;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 11441 11523 . + 2 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 11753 11927 . + . ID=g4062.t2.exon6;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 11753 11927 . + 0 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 12156 12353 . + . ID=g4062.t2.exon7;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 12156 12353 . + 2 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 12466 12884 . + . ID=g4062.t2.exon8;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 12466 12884 . + 2 ID=cds.g4062.t2;Parent=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS mRNA 9933 11529 . + . ID=g4062.t1;Parent=g4062;Name=g4062.t2 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 9933 10163 . + . ID=g4062.t1.exon1;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 9933 10163 . + 0 ID=cds.g4062.t1;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10258 10480 . + . ID=g4062.t1.exon2;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10258 10480 . + 0 ID=cds.g4062.t1;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10635 10768 . + . ID=g4062.t1.exon3;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10635 10768 . + 2 ID=cds.g4062.t1;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 10997 11060 . + . ID=g4062.t1.exon4;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 10997 11060 . + 0 ID=cds.g4062.t1;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS exon 11441 11529 . + . ID=g4062.t1.exon5;Parent=g4062.t1 NODE_955_length_15517_cov_44.5677 AUGUSTUS CDS 11441 11529 . + 2 ID=cds.g4062.t1;Parent=g4062.t1 #PROT g4062.t2 g4062 MRMYLPWFSVLQSARAPPIHPSRLSRRGCPGVVNVTLSISKGWCGRRSFATNAGQAGGSARATANDTAFKRLTELFKTIASNWFYLVITADVAYGQYVEVRRNRAVTNSIERGVCPPPETADLFVERADMVAKVKQLLQPTNRTRSFAHITGEEGCGKTTIVRQAAIEVGSGVVYVAVPNNINNFGKAFARQIGFEYEEFIGVTSTLGHKLLGLDPKADIQIDPAWLASLERAKNVFYDHARDFKVRHGRPAVLIIDNAERLAKKSPNGFQIILDFAKDCAEESTVIVVLVTRQTLDSPNAMEGASTWSNHVLPPLEVGDVDEATAVRFLQFNGIDGSTATHTVREVTGGRFRLLLAAALRYSRGDTFDDVKDDAMTRAEAALERLGLLDKNTDEHKYGFPLLLSLAKLATAKTMRVTSGAHAESIKDRRIPYASVVDVVPSRELRDRLLNGQVFTSHTVDHTVSFASRMIETFAVAMLQEERKVTYAAGIAPHPSVATVDKKDAIEE* #PROT g4062.t1 g4062 MRMYLPWFSVLQSARAPPIHPSRLSRRGCPGVVNVTLSISKGWCGRRSFATNAGQAGGSARATANDTAFKRLTELFKTIASNWFYLVITADVAYGQYVEVRRNRAVTNSIERGVCPPPETADLFVERADMVAKVKQLLQPTNRTRSFAHITGEEGCGKTTIVRQAAIEVGSGVVYVAVPNNINNFGKAFARQIGFEYEEFIGVTSTLGHKLLGLDPKADIQIDPAWLASLERAKNVFYDHARDFKV* # PASA_UPDATE: g4060.t1, single gene model update, valid-1, status:[pasa:asmbl_10110,status:12],[pasa:asmbl_10111,status:12], valid-1 NODE_955_length_15517_cov_44.5677 . gene 161 7377 . + . ID=g4060;Name=g4060.t1 NODE_955_length_15517_cov_44.5677 . mRNA 161 7377 . + . ID=g4060.t1;Parent=g4060;Name=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 161 259 . + . ID=g4060.t1.exon1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 161 259 . + 0 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 502 2376 . + . ID=g4060.t1.exon2;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 502 2376 . + 0 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 2741 2866 . + . ID=g4060.t1.exon3;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 2741 2866 . + 0 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 3069 5816 . + . ID=g4060.t1.exon4;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 3069 5816 . + 0 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 6096 6306 . + . ID=g4060.t1.exon5;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 6096 6306 . + 0 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . exon 6707 7377 . + . ID=g4060.t1.exon6;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . CDS 6707 7047 . + 2 ID=cds.g4060.t1;Parent=g4060.t1 NODE_955_length_15517_cov_44.5677 . three_prime_UTR 7048 7377 . + . ID=g4060.t1.utr3p1;Parent=g4060.t1 #PROT g4060.t1 g4060 MGSSGTSAHKEILKSVRPGLCDKSMLVRVATAKVIACLSDQSNSAVASELDSTFSQCVKGFDGADVDARRAIADCIAEVLAAVQSDRPGQLNASSRSAGPGATAFMHPPQEVLAMLSSAFAKGSREARVGLAHAFVAFLRFVGPSWVSRNLSVVVQSLLDSLAAPKWAPNPADTSAGCVCVSYVLRNGITLQLGESSQVALVLELARHVGRLSAGDPSVTPYALSVALGEIGGLLQRMGMPPQTLYDAAIEPVFAVLGHPSPTARIAAAWCLRTMAVTAPAQLAAYANRCTEIVRKERASVSRLSGHACALAALMSAVASCPLGVPHTVPKTVLAVAEELLRISDSNTSPAIIDAGWGLITALMSLGPTFVKDHLRKLFLLWREVLPRTTKEREAERMRALPLGLNVLRSRSCALMSIHAFVVSCPGMLTSEVSKRIVGLLNNGLLMLSAAASVRATGEIRQLFTVARQRLYVAFAGLPKSAYEGSCTTLIRLLVADLTLVDAPDSGATPSILRSLCNAVDRAVDGGAERTDYSIIEDLVASGAALAYTAMENDPYSVAYVHADGTAPQPPPPDVAVLDAAIPLFAVVLPGLSPAHKQEVLEHFVSCADKAKQSSGQQRLSIQANCLSAYSQAIKTMAETKAELGGGKLLEKSKELIQICLVSPEAVLRCLAADSLGRLALIAGDSLVNETVQQGLERLQADRDPNVRAGYSLALGAIYRYVGSIGSNKHLKSSVAILSALANDPLPLVQAWALHGLRLTMDNAGLVFSPMVGSMLSLVAGLLSSDAHTSQSVRRCLGGILNSAIGTLGPELQANDNSRALCVVLTRELQETNDLGVRAEAMLAIQQLIMFAPRKFNVADYLPYIRLSLGSSHLPLRQAALTCVRQLSQREASTLSAKGTEIERDLFGMLDTETLPYMRGQVREAITGLMAALASDRPSYWLTLVNERLTASGDDAGGAEGGSGAASNTGGSSASAGAGNDDDEQDEDGEGMVSSPPPPRVDANGATGASTQRRVTPGWDSKVFAMECFREIIRLCGDNPAHFDLTLARGVRAASPTTDLLVLRLSELVRTAFNAATSSMDALSLHGLSSLETIISRFAPAKDPDVEGQALLEQYQAQIGAALRPAFGADVSPTVTAAACQVSAQWISSGVSQNLQDLRKVQGLLVSLLDTMETYERTAFNESAATMVRLALLTAWARVYVVTRTSDTCEYLDVIVEPFLGRLSKHWMDLLRDAAVISLPEQYLKQLPGGGTFYASGTRDRVQPYYERAWPMVVHAVSLLIDTEHGALFRRDPEPQTPTPTPLAAMPENSEAAPAPDATTASAEKREIVKRGDAFYLVLGLCVQALSSRSEPATISKCLRALHQLFAPTQLFDDASDGTDTMGLTMELYVELLAVLHRLVQTQEVVVQLLAMETVRQLVNASVWIEPPNALEVRPGRSRAFATLDVCACVLLRQIPTIDPSFDSRGQSLSLSNDSHQLVAVTLSTLATLPSVCPRTIALQILPTALFLTGGVLRSDDIRAGSLALKTLRTLVSLPVDGQAEHDVPQASILQCALSAFCDSFEGSIKTHGAKDVRSKLGLLGLAVFVLCAPPEVWTHDLEARYIAGYKQVLQCGDAQSRLAAIQTLASFVQLPDFPRAIPFVQALISDVVSVVAKAGMAPATSETDVLVVVDSLRLLEVLFTQAGEHASKVLALIIPLLVPFLRLSTDPKPLAEHAPHATALHTFALGALLQLGPIKPDAFRAIIASLPADRRSRLESAIREDADRAHKADLKKAAAAAKVVAQPATPSIQLKMDFSNFK* # ORIGINAL: g10799.t1 original gene structure, not modified by PASA NODE_1087_length_14053_cov_41.8043 AUGUSTUS gene 13462 14053 . + . ID=g10799;Name=g10799.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS mRNA 13462 14053 . + . ID=g10799.t1;Parent=g10799;Name=g10799.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 13462 14053 . + . ID=g10799.t1.exon1;Parent=g10799.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 13462 14053 . + 0 ID=cds.g10799.t1;Parent=g10799.t1 #PROT g10799.t1 g10799 MGMGGKLEIARQESSSDATGRAWTTVPVPADAYFQLFVSVSCPFGRVLLNITDGGSDHLLLPFTYVNGATKHAKHYLFRSLPITEHVIIGFAMHGGTNGDHCILEELRLSLIGPARQFAAPSFLRPNATVEASLATTARRPPWMLANAINSLYPFVDKIRVFLNGHETIPESLRDDPKIEVAMSRLWGDYGDANKFF # ORIGINAL: g10798.t1 original gene structure, not modified by PASA NODE_1087_length_14053_cov_41.8043 AUGUSTUS gene 10482 12277 . - . ID=g10798;Name=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS mRNA 10482 12277 . - . ID=g10798.t1;Parent=g10798;Name=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 11920 12277 . - . ID=g10798.t1.exon1;Parent=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 11920 12277 . - 0 ID=cds.g10798.t1;Parent=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 11648 11754 . - . ID=g10798.t1.exon2;Parent=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 11648 11754 . - 2 ID=cds.g10798.t1;Parent=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 10482 11429 . - . ID=g10798.t1.exon3;Parent=g10798.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 10482 11429 . - 0 ID=cds.g10798.t1;Parent=g10798.t1 #PROT g10798.t1 g10798 MSSPSRASLRRMKAPASYGSVNAERDSDMEEFASPSKRGGKRGRSGSASGRPSATTRNHTHQQHPAHNTHKSTATRPIAVPSAPVSESARSQYGWDVGTPRTQMGMMNQRRSELLDNIGEGLGQADTADALGLLYPEWIELVKKRDVAVRTMFEKEREREKYDALPRLLAHLEVCSGLTFASTQQEAGIRTLVAQLRNKLRQYCTERNISVLESDIAAAMATDMSRAHACANDSAAANAIGANGGPQATSAAPPPPPPPPPPAPPMMMAGTASRQPPVARKLDISSAVEDKENAGGVSANSDASRDDGSQGGVVFKAPLRPQQFSGQGGMATATGALKGSSTRSSAAGAAPNAAAGASFFVENISAAAKSSLRKTQCDRSPGGTPARKPRGHNAHLRHAQAPDEVSPAAKDEGSFLASALRKKFRSVALPHSPAGNADTPTNAPATIGGLAVVAGSPSAFDSPYQPKMVM* # ORIGINAL: g10796.t1 original gene structure, not modified by PASA NODE_1087_length_14053_cov_41.8043 AUGUSTUS gene 31 5129 . - . ID=g10796;Name=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS mRNA 31 5129 . - . ID=g10796.t1;Parent=g10796;Name=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 5127 5129 . - . ID=g10796.t1.exon1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 5127 5129 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 4786 4917 . - . ID=g10796.t1.exon2;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 4786 4917 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 4589 4656 . - . ID=g10796.t1.exon3;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 4589 4656 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 3969 4419 . - . ID=g10796.t1.exon4;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 3969 4419 . - 1 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 3631 3760 . - . ID=g10796.t1.exon5;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 3631 3760 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 3367 3473 . - . ID=g10796.t1.exon6;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 3367 3473 . - 2 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 3029 3172 . - . ID=g10796.t1.exon7;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 3029 3172 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 2109 2865 . - . ID=g10796.t1.exon8;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 2109 2865 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 1639 1919 . - . ID=g10796.t1.exon9;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 1639 1919 . - 2 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 1118 1427 . - . ID=g10796.t1.exon10;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 1118 1427 . - 0 ID=cds.g10796.t1;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 31 984 . - . ID=g10796.t1.exon11;Parent=g10796.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 31 984 . - 2 ID=cds.g10796.t1;Parent=g10796.t1 #PROT g10796.t1 g10796 MAQAANSPNVSVLRGHKKRIYCIQQYGDALYSASADKTVRRWNLMTKECEAVFESHKSDVFCLQVFNGLLFTGSRDRTARAFTLDGKKVAKFQKVGATEVHALQCISRDRFQKGGQHSASSTSQLRLFTGHEDGHVREWDVSTGACIRAMRHANNGPIRSIDVRITASQSAPHAGQNSSGVSWGAYAASDTLVAGCNDGSALVFNLATGMCSRVIDAKVGRLLCLQRTAGSHIAYAGGSRRDITCIDLARGVAVGRLVGHSGPVTSLATYTVAVGDWQGHMLVSTSADRTCRLWDASTGNELGSLLGHGDWVRRAIVTENSESIISCSDDCTIRIASLADTIRLRPQRKTPAVADPISAAAAAIAQSGEPDSDTQPVATTLGSPSCASSLVSSYHSLSSASLFSTSSVGAGFCDRRQHFSASGSEFGSTFSMSSSVATDSAFSEMTVMVDDTTSMASQDVDSEIHTDTDFKLVEGEYEIGRLTPSIDGTASSVDAADSRDSHVPEVQEDECDTDEYKCGDKRDSGISCDDLLEEESAHARLSCEHKAPVVPSVDDTCDVQHPDVYVDVAPDDHHGVPVPDHHGHYVPPRPASTDADSDEGFEDELLALRCKFSSWTSFQRARAIRVLVGDCSMADLSRLYPTLQSLIQRDFIACLPYELAVKILSMLDAQDLCRAALVSKQWRSMANDPFVWRQLCVRQEAADASVSPDVARQRLRTRGVVAIPRHPASMLTSLASGLNVDRRVELCGYANPYKKRYADSHRLVRNWKDGRYHVRVLEGHLGPVQALQYDDKAIVTASEDSTIKVWDMETGRCLTTLYGHTRPLTDVCFRRDTPTLANDIAVGGLIVSASLDSTVRAWDLSLGLCIGVLRGHEQGVCTAQIDDAGTVYSGSYDRTVKLWKRNTAAAAATPSDAAALAMSVAVRGMRGEDDSGGFQCVATLRGHGHYVYSVRVAADIFATASHDRTVRVWDKKTLECLRVLSGHESAVKCLSFGPESSGERLRRVKRESERRKSSLGGAVSATAATPGTIGVDGAVAVATPTPSGSTTRMPVVYVTPGMECVISGSFDRTDNIRVWDLLSNGRSEDVGGGQCELSVTCRNDWTRCVAMDARFI # ORIGINAL: g10797.t1 original gene structure, not modified by PASA NODE_1087_length_14053_cov_41.8043 AUGUSTUS gene 6003 9677 . + . ID=g10797;Name=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS mRNA 6003 9677 . + . ID=g10797.t1;Parent=g10797;Name=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 6003 6149 . + . ID=g10797.t1.exon1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 6003 6149 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 6308 6454 . + . ID=g10797.t1.exon2;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 6308 6454 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 6564 6680 . + . ID=g10797.t1.exon3;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 6564 6680 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 6901 7028 . + . ID=g10797.t1.exon4;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 6901 7028 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 7256 7377 . + . ID=g10797.t1.exon5;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 7256 7377 . + 1 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 7539 7879 . + . ID=g10797.t1.exon6;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 7539 7879 . + 2 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 7975 8055 . + . ID=g10797.t1.exon7;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 7975 8055 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 8375 8677 . + . ID=g10797.t1.exon8;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 8375 8677 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 8855 8952 . + . ID=g10797.t1.exon9;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 8855 8952 . + 0 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 9116 9210 . + . ID=g10797.t1.exon10;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 9116 9210 . + 1 ID=cds.g10797.t1;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS exon 9580 9677 . + . ID=g10797.t1.exon11;Parent=g10797.t1 NODE_1087_length_14053_cov_41.8043 AUGUSTUS CDS 9580 9677 . + 2 ID=cds.g10797.t1;Parent=g10797.t1 #PROT g10797.t1 g10797 MANPAQLQFQVRNNATEVQDFLRDLTNWETDIKKKDETLKKQKPVAAKQIPPVRNAAVVAKTSESAIADSAVGIADGTADKKDKIKAYDYRSWDKYDPDKVIEEQEEKEKTAEEIAEARKRAEAEAKLQRGVQAKEEGNSLFAKGEYVRAVECYARAIECDQSNAVYPANRAMAYIKLKKFEAAIIDCDAAIALDEKYVKAYSRRAACREELKNIDGAIRDFEKVLVLEPTNKEAQLAIQRLKAPKKAPTVAKAGSAVAPPATPVSTTPKAATAPAAQPQRATQPPVVVAATPPVVQPVQVAPRKDGGSAASTKKKSVGFKIEEIDDEHPVEAKRPLKRIPIEEIGFDELEKRKAKKEAPKIEGVEPKQPSPIPSKAPTVPPLASPTADVTPIKAAVKSTSAFAAADSPAAPTKRTPTTSPVPTPASPGASLLPSAPKTSFELEKGFAQLKKDDTALYRYFSAIDPATYKTLFQQSLSSEIFIKIMALVKRHHIAENQPVLPILKNLSTVKRFDVAVMFMSEKEKQVVRDIFAHVEAVKESGDVDEIAALKKLYGLQK* # PASA_UPDATE: g2201.t1, single gene model update, valid-1, status:[pasa:asmbl_7063,status:12], valid-1 NODE_4179_length_2066_cov_27.563_potentialcontaminant . gene 3 2061 . - . ID=g2201;Name=g2201.t1 NODE_4179_length_2066_cov_27.563_potentialcontaminant . mRNA 3 2061 . - . ID=g2201.t1;Parent=g2201;Name=g2201.t1 NODE_4179_length_2066_cov_27.563_potentialcontaminant . five_prime_UTR 2046 2061 . - . ID=g2201.t1.utr5p1;Parent=g2201.t1 NODE_4179_length_2066_cov_27.563_potentialcontaminant . exon 3 2061 . - . ID=g2201.t1.exon1;Parent=g2201.t1 NODE_4179_length_2066_cov_27.563_potentialcontaminant . CDS 3 2045 . - 0 ID=cds.g2201.t1;Parent=g2201.t1;3_prime_partial=true #PROT g2201.t1 g2201 MPPTNSFQMNVDAIKLQIQTCTESLRQCIGDCDGLAQKIGLETNGLTESRRRLDNDYASDARELAVYFPVYGVVKAGKSTLLSCLTRTTILPSRPLPMTTIPIKILHKGGTEGISLVIPNAEQWNACIADVVKTKTLPTGKKHPDHVTILFNNSKEGRVRFKTGILRDADAIADELMLLSDVARLCFLLGVDLDKYNIDLSLEHLPLITMDIAIFRNLGVDRPFFLVDTPGPNEACCDEFLERINQRVLDGGRGALLVAPQSQIESNDMYEILGNIADSKSVRKILVALNQVDGMSDRKKQLPDVIERLNGILKEVERPFDIIPVSSSRIKMMCELQAELDSGRAGFAESKIWTQVVEAMGIHPEKLVDVKKYARGLILRELGTYNAVDLVKAVKGFYLDWETFALQTRVDDLTDVRKALNKFVEQIKTSMVDKVAQDNELTKLRNAQENANGFRSQVSILVRTLRLTLRKSFNVERENFIVETKRLVQLVQKKVKDINADNPTPKSIRFQNMRALKTWCEETEKIAKGMIALACNNFLDIVRTKTSGVVKHEWQKLQGLLNEVEHNTGEPLKPTRANLSEPPTFTLRNPNYTSESASIDFWPTFTERDKGGVVIRDTDTFVDVVSQNLIKTASLFANAAYARFEESLESILNKFQVRADEYVRRVDDLIRCQKGLQTADR # PASA_UPDATE: g1147.t1, single gene model update, valid-1, status:[pasa:asmbl_7747,status:12], valid-1 NODE_4952_length_1120_cov_39.9569 . gene 318 1089 . + . ID=g1147;Name=g1147.t1 NODE_4952_length_1120_cov_39.9569 . mRNA 318 1089 . + . ID=g1147.t1;Parent=g1147;Name=g1147.t1 NODE_4952_length_1120_cov_39.9569 . exon 318 453 . + . ID=g1147.t1.exon1;Parent=g1147.t1 NODE_4952_length_1120_cov_39.9569 . CDS 318 453 . + 2 ID=cds.g1147.t1;Parent=g1147.t1;5_prime_partial=true NODE_4952_length_1120_cov_39.9569 . exon 729 878 . + . ID=g1147.t1.exon2;Parent=g1147.t1 NODE_4952_length_1120_cov_39.9569 . CDS 729 878 . + 0 ID=cds.g1147.t1;Parent=g1147.t1 NODE_4952_length_1120_cov_39.9569 . exon 1078 1089 . + . ID=g1147.t1.exon3;Parent=g1147.t1 NODE_4952_length_1120_cov_39.9569 . CDS 1078 1089 . + 0 ID=cds.g1147.t1;Parent=g1147.t1;3_prime_partial=true #PROT g1147.t1 g1147 SPRGAWQQRTSAVESPRALHRPTQGLCGDHVPPGTASQHSHQQYWALVDGSYNRDHCAVWTGAVKGCEAHFCAHPGQRTHRQHRTRPSWHDEGIYVFRL # PASA_UPDATE: g7833.t1, single gene model update, valid-1, status:[pasa:asmbl_1514,status:3], valid-1 NODE_1414_length_11484_cov_40.2375 . gene 110 2500 . - . ID=g7833;Name=g7833.t1 NODE_1414_length_11484_cov_40.2375 . mRNA 110 2500 . - . ID=g7833.t1;Parent=g7833;Name=g7833.t1 NODE_1414_length_11484_cov_40.2375 . five_prime_UTR 2426 2500 . - . ID=g7833.t1.utr5p1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 2040 2500 . - . ID=g7833.t1.exon1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 2040 2425 . - 0 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 1752 1844 . - . ID=g7833.t1.exon2;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 1752 1844 . - 1 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 1426 1453 . - . ID=g7833.t1.exon3;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 1426 1453 . - 1 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 1112 1249 . - . ID=g7833.t1.exon4;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 1112 1249 . - 0 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 671 831 . - . ID=g7833.t1.exon5;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 671 831 . - 0 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . exon 110 418 . - . ID=g7833.t1.exon6;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . CDS 325 418 . - 1 ID=cds.g7833.t1;Parent=g7833.t1 NODE_1414_length_11484_cov_40.2375 . three_prime_UTR 110 324 . - . ID=g7833.t1.utr3p1;Parent=g7833.t1 #PROT g7833.t1 g7833 MATLARKRLLSLATQAVRISGTRAIFTASRLAVARLPAVSARKAAYAAGAVAFAAVPSLAICASNPREIAPKLRLADTLYDQAKFQELHDFLESVLAQYSDSGEIAWRLARAKHELALDPATSNDAKKKLVYDAHALAKRAIEIDGSNFACHKWFAITLSDVGDFEGVKVKIGNAFVIRDHFVKAIELNPKDPTSRHLLGLWCFTFAEMPWYQQKVAAALFATPPKSTYDEALGNFLQAEDIEPGFYLKNAVMIAKTYQRMGKTDEFNKWVDAALKMPVRNPSDKESHDEAVALKGGRK* # PASA_UPDATE: g7835.t1, single gene model update, valid-1, status:[pasa:asmbl_1515,status:3], valid-1 NODE_1414_length_11484_cov_40.2375 . gene 7610 11430 . - . ID=g7835;Name=g7835.t1 NODE_1414_length_11484_cov_40.2375 . mRNA 7610 11430 . - . ID=g7835.t1;Parent=g7835;Name=g7835.t1 NODE_1414_length_11484_cov_40.2375 . five_prime_UTR 10815 11430 . - . ID=g7835.t1.utr5p1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 10769 11430 . - . ID=g7835.t1.exon1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 10769 10814 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 10588 10643 . - . ID=g7835.t1.exon2;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 10588 10643 . - 2 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 9868 10231 . - . ID=g7835.t1.exon3;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 9868 10231 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 9592 9681 . - . ID=g7835.t1.exon4;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 9592 9681 . - 2 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 9291 9379 . - . ID=g7835.t1.exon5;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 9291 9379 . - 2 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 8893 9000 . - . ID=g7835.t1.exon6;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 8893 9000 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 8455 8592 . - . ID=g7835.t1.exon7;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 8455 8592 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 8042 8230 . - . ID=g7835.t1.exon8;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 8042 8230 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . exon 7610 7825 . - . ID=g7835.t1.exon9;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . CDS 7646 7825 . - 0 ID=cds.g7835.t1;Parent=g7835.t1 NODE_1414_length_11484_cov_40.2375 . three_prime_UTR 7610 7645 . - . ID=g7835.t1.utr3p1;Parent=g7835.t1 #PROT g7835.t1 g7835 MGCVSSKRNIDFSAEVNFEHFKLLRSVGKGAFGKVCIVMRRDTDKLFAMKYMNKEKCIEKHAVRNVINECRILQMLEHPFIVNLWYAFQDEEDLFFVVDLMLGGDLRFHLNKTGAFAEDRVKLYAVELSLAIEYLHERKIIHRDIKPDNILLDELGHVHLADFNVAAFVPDGVELHVRAGTRPYMAPEVLLKQGYDTGADWWSLGVCLYEMLKGKHPFRSGNPDEVIELITRTPISYPPQWSIPCVNFLQRLLDRDPKVRFSIVRSSMADLKRDPWFTGIDWNSALKKEMTMAFIPDKDKINCDAMYELEEMMLEDNPLHKKKQRLRTAGKGDTMDSVKEKLGAELQLIADKFVVYDRLKSNGMVRQPSLGLIDDLRDDKSVDFSLDDDGAGPSAALSRAASARSNNRTLAPDDVKVQA* # PASA_UPDATE: g7834.t1, single gene model update, valid-1, status:[pasa:asmbl_1518,status:3], valid-1 NODE_1414_length_11484_cov_40.2375 . gene 3247 5560 . + . ID=g7834;Name=g7834.t1 NODE_1414_length_11484_cov_40.2375 . mRNA 3247 5560 . + . ID=g7834.t1;Parent=g7834;Name=g7834.t1 NODE_1414_length_11484_cov_40.2375 . five_prime_UTR 3247 3423 . + . ID=g7834.t1.utr5p1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . exon 3247 3426 . + . ID=g7834.t1.exon1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . CDS 3424 3426 . + 0 ID=cds.g7834.t1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . exon 3692 3870 . + . ID=g7834.t1.exon2;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . CDS 3692 3870 . + 0 ID=cds.g7834.t1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . exon 4242 4350 . + . ID=g7834.t1.exon3;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . CDS 4242 4350 . + 1 ID=cds.g7834.t1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . exon 4722 4757 . + . ID=g7834.t1.exon4;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . CDS 4722 4757 . + 0 ID=cds.g7834.t1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . exon 5230 5560 . + . ID=g7834.t1.exon5;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . CDS 5230 5391 . + 0 ID=cds.g7834.t1;Parent=g7834.t1 NODE_1414_length_11484_cov_40.2375 . three_prime_UTR 5392 5560 . + . ID=g7834.t1.utr3p1;Parent=g7834.t1 #PROT g7834.t1 g7834 MIQYVLLFSRQGKVRLQKWYQALPQKDKKKIMRELTTMILARKPKMCNFLEWKEYKIVYKRYASLFFCVAVDQDDNELITLEIIHRFVELLDKYFGSVCELDIIFNFEKAYYILDEYIVGGEVQESSKKTVLKGMAAQDQLQEDAEGGGGPLSVLDELVGGK* # PASA_UPDATE: g14356.t1, single gene model update, valid-1, status:[pasa:asmbl_5268,status:12], valid-1 NODE_2939_length_4686_cov_33.8974 . gene 2659 4443 . - . ID=g14356;Name=g14356.t1 NODE_2939_length_4686_cov_33.8974 . mRNA 2659 4443 . - . ID=g14356.t1;Parent=g14356;Name=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 4341 4443 . - . ID=g14356.t1.exon1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 4341 4443 . - 0 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 3883 3961 . - . ID=g14356.t1.exon2;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 3883 3961 . - 2 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 3633 3768 . - . ID=g14356.t1.exon3;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 3633 3768 . - 1 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 3265 3317 . - . ID=g14356.t1.exon4;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 3265 3317 . - 0 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 3012 3140 . - . ID=g14356.t1.exon5;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 3012 3140 . - 1 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . exon 2659 2847 . - . ID=g14356.t1.exon6;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . CDS 2766 2847 . - 1 ID=cds.g14356.t1;Parent=g14356.t1 NODE_2939_length_4686_cov_33.8974 . three_prime_UTR 2659 2765 . - . ID=g14356.t1.utr3p1;Parent=g14356.t1 #PROT g14356.t1 g14356 MQLHGRSREQRYSKLADWEYINQCSAVANPVPFFGNGDILSYEEAAHHIENAGVSGLMVARGALYKPWIFTEIKERRHWDISSGERLDILRDFVNAGLEHWGSDDQGIAATRRFLLEWLSFAYRYIPVGLLERLPQKINEPAHPYIGRNDLETLMASPSAGDWVKLSEMLLGPVPDDFVFIPKHKANSTTAEG* # ORIGINAL: g14355.t1 original gene structure, not modified by PASA NODE_2939_length_4686_cov_33.8974 AUGUSTUS gene 112 2682 . + . ID=g14355;Name=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS mRNA 112 2682 . + . ID=g14355.t1;Parent=g14355;Name=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 112 181 . + . ID=g14355.t1.exon1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 112 181 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 305 509 . + . ID=g14355.t1.exon2;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 305 509 . + 2 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 784 897 . + . ID=g14355.t1.exon3;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 784 897 . + 1 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 1100 1187 . + . ID=g14355.t1.exon4;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 1100 1187 . + 1 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 1333 1422 . + . ID=g14355.t1.exon5;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 1333 1422 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 1559 1599 . + . ID=g14355.t1.exon6;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 1559 1599 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 1723 1800 . + . ID=g14355.t1.exon7;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 1723 1800 . + 1 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 1959 1998 . + . ID=g14355.t1.exon8;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 1959 1998 . + 1 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 2123 2275 . + . ID=g14355.t1.exon9;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 2123 2275 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 2405 2488 . + . ID=g14355.t1.exon10;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 2405 2488 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS exon 2602 2682 . + . ID=g14355.t1.exon11;Parent=g14355.t1 NODE_2939_length_4686_cov_33.8974 AUGUSTUS CDS 2602 2682 . + 0 ID=cds.g14355.t1;Parent=g14355.t1 #PROT g14355.t1 g14355 VAMHALKVKEGLLREAHERIAAAERVTLDVRVFFERDKVRAEGEHALLRTRFESARRERDTLQLELTETIKQMQRLSAEKEKYEAIVNGVEYLKVLKEGNEESSSDILKKLATRPDAVATVHKANVWLGKEFAVLKRQHRDLSNESAAIRRERDQLLDRARRDMTEIQSMKAKLEAMTMECRQAEEENELLARRAKRPRSGNAPMLSLPNHNNEINLDMDDVPQTQTKRETAVSPASLFAIHTPRPTQATPVDAHKPSRAIDNVAGFNSLPKSLSLFTGRNAAAAAGIAKAADTSTVQIVNGFDGLGGQGRLLVHPTTAPLRSIAIPKKVTQRPHALKRAMLMGGIH* # PASA_UPDATE: g3888.t1, single gene model update, valid-1, status:[pasa:asmbl_4490,status:12],[pasa:asmbl_4491,status:12], valid-1 NODE_2520_length_6013_cov_36.6177 . gene 3120 5676 . - . ID=g3888;Name=g3888.t1 NODE_2520_length_6013_cov_36.6177 . mRNA 3120 5676 . - . ID=g3888.t1;Parent=g3888;Name=g3888.t1 NODE_2520_length_6013_cov_36.6177 . exon 5404 5676 . - . ID=g3888.t1.exon1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . CDS 5404 5676 . - 0 ID=cds.g3888.t1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . exon 4896 5063 . - . ID=g3888.t1.exon2;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . CDS 4896 5063 . - 0 ID=cds.g3888.t1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . exon 4655 4703 . - . ID=g3888.t1.exon3;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . CDS 4655 4703 . - 0 ID=cds.g3888.t1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . exon 4304 4483 . - . ID=g3888.t1.exon4;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . CDS 4304 4483 . - 2 ID=cds.g3888.t1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . exon 3120 4067 . - . ID=g3888.t1.exon5;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . CDS 3319 4067 . - 2 ID=cds.g3888.t1;Parent=g3888.t1 NODE_2520_length_6013_cov_36.6177 . three_prime_UTR 3120 3318 . - . ID=g3888.t1.utr3p1;Parent=g3888.t1 #PROT g3888.t1 g3888 MQDCEANPRCKRKALNDLLAMPMQRLTRYPLLLETIMQATPKSHKDYPTLLRATQMVKDVVTGVNEQVKRTQNMRRLAALQKTIDSSALGYSLDIMGVPREVLHEGQLTLSACPQTKNRNATVHAILFSDLVLLTYKKDVHLIVEIEPIPLYEVLVRNVESLKERCAFFLVSTSLKGPRMYELIAESEFEKKAWIAKIMNAARACGKPPLGLQSYMESLKKREVPAEGTDDASSSGPAAPPDTPDTPDTAHASLDDDAHAADDTLVHIGEIDALLAELVAVAAQTDGDLIPLVKRKHVLLARLDAEQLSRSQSWGLASAQAQAPEGAGLGESGGSGVSVPPAAAVLKKKPLMERSLSAELLKVFEEIRINVMGSPLSDKFETVSVADAESGKYERSRLVALVTDELRTARSYVANRSASPPDVPGDLSQAQGIHVIHENPASPDPLTRVRRPSMAPGPHVAAPDDETSEEEI* # PASA_UPDATE: g3887.t1, single gene model update, valid-1, status:[pasa:asmbl_4489,status:12], valid-1 NODE_2520_length_6013_cov_36.6177 . gene 125 2886 . + . ID=g3887;Name=g3887.t1 NODE_2520_length_6013_cov_36.6177 . mRNA 125 2886 . + . ID=g3887.t1;Parent=g3887;Name=g3887.t1 NODE_2520_length_6013_cov_36.6177 . five_prime_UTR 125 126 . + . ID=g3887.t1.utr5p1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 125 219 . + . ID=g3887.t1.exon1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 127 219 . + 0 ID=cds.g3887.t1;Parent=g3887.t1;5_prime_partial=true NODE_2520_length_6013_cov_36.6177 . exon 415 597 . + . ID=g3887.t1.exon2;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 415 597 . + 0 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 942 1220 . + . ID=g3887.t1.exon3;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 942 1220 . + 0 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 1332 1453 . + . ID=g3887.t1.exon4;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 1332 1453 . + 0 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 1631 1834 . + . ID=g3887.t1.exon5;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 1631 1834 . + 1 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 2003 2164 . + . ID=g3887.t1.exon6;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 2003 2164 . + 1 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . exon 2279 2886 . + . ID=g3887.t1.exon7;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . CDS 2279 2882 . + 1 ID=cds.g3887.t1;Parent=g3887.t1 NODE_2520_length_6013_cov_36.6177 . three_prime_UTR 2883 2886 . + . ID=g3887.t1.utr3p1;Parent=g3887.t1 #PROT g3887.t1 g3887 ETLCKYYLQGACALGRDCRFSHDKAVAKPSNICRYYAVGACAYGDRCRYDHVRPSPAPPQPQPQPQPVAPSADGPRKLQLVPLRKSDDAPSKAHAHVALSYSGVASAAPSGAENGDMSATHPHPTLTPEVATVETLRGRPLCPFHTQKGYCPASSCTYHHGTRCSTCGLHCLRHDDTVDRDRHLRECAEAADSKRRRMAVLQRSAQVECSICLELVLSKRSAGERRFGILTECTHPFCISCIRNWRGTSGDAGDATRACPICRKVSYFITPSAHWVDDPEEKRRLIDEYKGQLAKRPCKYYMDGESCPFGTSCFYRHVDKYGREEAKECKPRMYGTADGERGVIRAIRLWDFLEARDRRGRASPAAAPLAAHDGQGVTTTTEAEEADDDGGVNFDEYEYGYEDESGFAAYGPPDGDAGGDAYAAHYISAYGYPPNGDAGSFFSGSQLLHGQHGGPADDDNEMPTWNDEELAAYFAQHAVVGGDEDGRGLASVPDVGIASAGQAAPGGPFGAAHAGSGGSAVGGAGGGDADTARPPEERLLGAQLGLWQ* # PASA_UPDATE: g5380.t1, single gene model update, valid-1, status:[pasa:asmbl_6892,status:12], valid-1 NODE_403_length_24526_cov_42.1106 . gene 10486 12735 . - . ID=g5380;Name=g5380.t1 NODE_403_length_24526_cov_42.1106 . mRNA 10486 12735 . - . ID=g5380.t1;Parent=g5380;Name=g5380.t1 NODE_403_length_24526_cov_42.1106 . five_prime_UTR 12691 12735 . - . ID=g5380.t1.utr5p1;Parent=g5380.t1 NODE_403_length_24526_cov_42.1106 . exon 10486 12735 . - . ID=g5380.t1.exon1;Parent=g5380.t1 NODE_403_length_24526_cov_42.1106 . CDS 10486 12690 . - 0 ID=cds.g5380.t1;Parent=g5380.t1 #PROT g5380.t1 g5380 MRMHNSKTETHAAHGIILKMKSTPAIAVGLFSTFLILLTLCRQCTATGDLIIVSDFGNDLALLPGIITQIQIRGEASGATITVQSATATTIRIFAVLHPQPALPAPYTAVSSSLGVVGYRIDRADGGEFQMLKLSTATLLLTQDQASSQDVYLLKVDGTGLGYATMDRAVYSAIDSRVNVDSITTGSYTIATAPRGGAVASGYGEWRTLTTSPANFSLPGGLSVAVAETGAVRTSARPRLMVSKRDKVPSTFSDPGGAHVSLNTYIVVNIEPSDASVGSLSAGEFALTMSLPYALTLAAMSPPSPTPSQLRWEILSTSSTTPAWLRLASTADASAGTVGGQWAPGEVAPTASQGGRSHVWVFGLFAQQTGVQTLGEWLPLTSGASAGDKTVIKFHSVGIASPDIAPSLSIATTPTENSRMRLTAIAKGLTTVPPMHTIVAMDAENSVQGYTLEVDPTRAFVAGTLTIHTQNTDVITSAIASGWRIVALRCADAYEGDCETVRAIDTTSTASQLRSFDITLTDSGRYFLAVASADAATLAQYSRQQPIVPSSTDTTSKTTLIFPFGLSVDVTVSSPTFIAVYRAERTVRTLPPGRGGVGVFLRLYATKGDLTTDGGVVDTGVAVMDAPTDAFTLTMTFRYDDSRWKDASVAETSLRFARYDDATKVWLFPTAQSVDITKNVLTATMQPYVEWAVLGIQTEDMLDASSDAAGAHVLFGVAINFVATMAVSFLLAGM* # ORIGINAL: g5382.t1 original gene structure, not modified by PASA NODE_403_length_24526_cov_42.1106 AUGUSTUS gene 21988 24159 . - . ID=g5382;Name=g5382.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS mRNA 21988 24159 . - . ID=g5382.t1;Parent=g5382;Name=g5382.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 21988 24159 . - . ID=g5382.t1.exon1;Parent=g5382.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 21988 24159 . - 0 ID=cds.g5382.t1;Parent=g5382.t1 #PROT g5382.t1 g5382 MAEVLQPHFDFLWSPTLPMSPSYPEFPSLFEGAPVVVSAPTVETKRPPQMHMSLQPKGDLIVPLAPWHVNHRHANNVCAPSEIDIGGSFGIVNRDCCCRLFERTYTNEFFRQKHQVYIHSNSGRGGDDDVGVIVVVKSEKGRDSNHVAYRVLVWTAQCAHVFRIAHTVHDDSSKKLSEPALKAAVVTRLKSSCSSLKEASILASVRVRDRRGNVPPEFQRRLAEFEEQQADFAYPKSYKFGVVCVRPGQTTENEIFGNRDSTAAFDEFLSQLGVKVPLAGHSGFAGGLDTRRKSTGDYSVYFDSSAKISREAEGMDRSTALPDELEVMYHVSTLLPFTDKDPQQLQRKRHIGNDVCVIVFMEQGCTTFDPSILRSHFNHVVCAVRHEGYDEGSEAEGLRPTPRYSVQFSAKLGVPNFGIFSGGAPVAFAKGDRLANYLVSMLSEGQRAALLAPAFLSPILRFRSDSLGKIIAEIVSSLSLSEKMNASSNESLESDRGEGSVDDTKHPAARRLSSVPDWVNDKLNTFKLNWRRRTSSSASSASSTTSPGETSTSGDLLCNISDSPLAAVDGVYRDGETSSASSPNVSAVGERRNSRNYKGRPLSAPASRRKSSPAVSLIGQLAMHARRRKSAFSEREDVTETNSRATPPSTLFGDVKETCAESVGEAAPSDDTCTPFCGSACASQPLFATETALASPKMSIFRRADIFRRPLVNSKGKTRETEL* # ORIGINAL: g5378.t1 original gene structure, not modified by PASA NODE_403_length_24526_cov_42.1106 AUGUSTUS gene 105 3257 . + . ID=g5378;Name=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS mRNA 105 3257 . + . ID=g5378.t1;Parent=g5378;Name=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 105 861 . + . ID=g5378.t1.exon1;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 105 861 . + 2 ID=cds.g5378.t1;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 1075 1246 . + . ID=g5378.t1.exon2;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 1075 1246 . + 1 ID=cds.g5378.t1;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 1455 1904 . + . ID=g5378.t1.exon3;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 1455 1904 . + 0 ID=cds.g5378.t1;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 2130 2302 . + . ID=g5378.t1.exon4;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 2130 2302 . + 0 ID=cds.g5378.t1;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 2588 3257 . + . ID=g5378.t1.exon5;Parent=g5378.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 2588 3257 . + 1 ID=cds.g5378.t1;Parent=g5378.t1 #PROT g5378.t1 g5378 ATKAWGSNERMNVAAESTGDKHAHARIQSHTTTGHSASDRHHSPHGGNAAGAVSGGGSRRVGGEGASILPDFYHDPLFISTARSLRSEDSGRSQRKSRNTTAAVADELDKSIKYIDNSRVVRGERGDGTGGGGTADQRPPKETGETKAYYEKPPPKKSKKKSKKGKDKRSERKGRRRHETSSSSSSESSESTASTAESTDDGSDSSTSGERSKRRHNRRKRKMSAKKRAHKGTQLYFVLPDAIANNSMKRTRKNRGRRRSDSEMSDDISEGDSGRGRMGDRARKRAKKLDAEDRPRTARRRRRYKNRKEEAAVTIQRHYRGHMARRRYRSLVLARYLEKDRFARSYIDSIVNEYVTDVFIPDILIDIFAEQQRVGSEWSAMPEGGELDPREVALRYIVEDMVGEVVGACVRSMLGSVTDALVRQYFMDKLNLLDDPLSALRNEFIDEAVRESVRATVSETVRDLVSDYFSDRHANDQFEDILEECIPEMCLHIVEESIVEETNAALVNSIIDDVISRHVRRGIRDALREREGYLREAQAKEVSKYAGAKMLDSILMDCLLANVADQGERMSLLDQSHRLMEEVMGAILLRQMWAIDSRLGGNVLQNTTLLLHARSGAHDHSAGGGRTRSGNDVASPSAQEIVSSGVAISSGTVALRIPFNVSGLASSTSLSGGGQSPAVVAGQSQQVVFDSASRHIHRTIAADAALDVLLDELCDWLDAPLDTVTPAMQSAHVLTPAAR* # ORIGINAL: g5381.t1 original gene structure, not modified by PASA NODE_403_length_24526_cov_42.1106 AUGUSTUS gene 13385 21433 . + . ID=g5381;Name=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS mRNA 13385 21433 . + . ID=g5381.t1;Parent=g5381;Name=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 13385 13912 . + . ID=g5381.t1.exon1;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 13385 13912 . + 0 ID=cds.g5381.t1;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 14129 14231 . + . ID=g5381.t1.exon2;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 14129 14231 . + 0 ID=cds.g5381.t1;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 14512 15043 . + . ID=g5381.t1.exon3;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 14512 15043 . + 2 ID=cds.g5381.t1;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 15294 18449 . + . ID=g5381.t1.exon4;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 15294 18449 . + 1 ID=cds.g5381.t1;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 18697 21433 . + . ID=g5381.t1.exon5;Parent=g5381.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 18697 21433 . + 1 ID=cds.g5381.t1;Parent=g5381.t1 #PROT g5381.t1 g5381 MSFAHEKDGAFDEYSWRTVGQSTEDAIDLTRVDDSPVAVTPKYTSDTKAAIEGVIVPRMSVEEVADEDGIEVGLLRRHGDARESGTTWDNPFAVQVKSEDANEDAPSHEKDAHCKVDADAGGYCEVIGDDDIRQGDPLKDDQVEESEATSNEGERTRLASLLASTVEEDKLTFYAEALPFMTRLPPLSSCAHQAFLRELVFLLSIPDIISEREDIRAWRDKLHSDLSRCTDCVDAYHHAIDWLTTAASDRDSSKAFRQYIDKDDITRVANLLQSTMHSSGLATHAQDRQGATRRAPERQPGPLQDAIKVLKTASYEAVRYLGMHIGRNVKLRGLVGRALSVLSQRGVYDGESELAWGSHLNPGSATAWTLLWHCDARVRDRARAQLDRAAKIDAGSISSVITATAWAVDATFGEIDEGVNGVDPFFGSRAKRNRFVALLILMRRMNSAALGIFLSEAVRLDRLVAAIADAASATDAQLDDKENMVDATVACLDLVLGRLSIGVPYPFEKRPLAQLALMSPFLEIAVALWAAVSSTNPDPFPVKASGNISAARVLECILRHCLVVMCQSSSADFASNNRSDGSKPAVGIMDSAVEIVAFVVRECARARVSVPCVRAAVVGSANEVGWAGGLAMCGAFRHLHSNEHTHQHGASGASGAAGMKSASHHNDGGSSHRPLLVSSSCCHLAWAALEEYATSACKCVATRHNSTETAQPVSISLAPLTELLSLRHDGDALRLIMLALKCNSDMAGVFRTQPLSVSSEPFSVTDDVTACRIKLASRMGDVSRSVAGRAEIVSRLFSSDETLPMVAAACASPCLELASAGAHVICDYLSTRAITSPDASTDLAARMLQCRVKARTVADLGRRPSLDDAIVECVLALGQWLPVLLERCSGSDPSSAPAVPGEPSPDNPMWAPALSFVRALFDGAVRALKERCAVPFHNVRRSVGLSVKPTTAQRIAVLSALDRAEQGRSKSASETPSFPTTPVKSVANAPTPLLPTSAVTGKSENPPAHVTAATTAPSVASVPARALTPELPPKKTSLHLSAAQPARARTGPVKVMSLEEVRRLDAAKGTVARKTNPYGAGVTVASAPPNSLPQRSGTYTAPHNIVPARGSNAVAGPPVSAPSARQPSVFAGSGKAAAVTSVAAAPVPIVRPAPTPIFPPQQPRESSPFGGGSDRSDTQTRGAAVVPQEFYSSVFLLPLCKGGGGGAGVLQRDTDDVLSVIPTSFSSEAAFRRYFMDLLKLELQESLLGELQRWQSKRRYRLRFMSESATTTPDGFVDFKMATVDRASGVSMGGDSSSLGGDFGDNDIVLLWQGANDPFKAEDTARLLSVVLGGNRRAGSVSMRAQRRMMGECSAIVLDRAASAARAFKSVATLPQNWVRRLVSPVCELPRSIVPPEEPNPGWMDAIGVHLNEGQRMAVKSALSVKEGLALWQGPPGTGKTKTVLAFLGLALRPPTDPNGMHTKVLLCAPSNAAVEEVVRRIRRDGLVGCDGRKFFPEMLHLTMRDTHDDADNNNAGAQAHETEAQLIELNERLGMMQLASREDPENAASLAEEIAYLSAQIRSLEASLMGRAEAGVDAATERRQREEKMSKCELVCCTLSSAGNMALWRSPKRFEWIVVDEAAQSIEPETLIPISAHRCPRMLLVGDPRQLPATVVSAVAKKNGLGQSLFERITRHYEPKGVDQIPVVMLTEQYRMHPDICRFPSDAFYDGRVVTSAERMSWPTPSFYDDGRFGPYVFYDVAEGEETRQAGSYSVGNVVEAKFIARVIHELRLKHFTHDNPAEFARRVGVITPYQQQTEFIRHELVKFHGLDRVVASNVEISTVDGFQGREMDIIILSCVRATDQLGFLTDARRMNVALTRSRLALVVVGSAGVLSRSGLWRNLIEDARRRGLVRSTKSLAGENAPRTKPVATGHAASDRSTDITSCDERGRRDLIGRDKNDTKRPDKDRRDDVSRSDTRRDVDSARGEHRRVADPRANRHDSNGDHVSREADQRNDGRNTDTHARRGDGTRRTYDGTRRIDDTRRAVDDTRRGDDAHHANEDGGHRDSRVTYREGAKAYSRDQNPTSRSERRARSPSPSDSDRATKKPRHDSGSADVCAEDPADKKDRERESGRSRSGGGETDRFEMVLSAPIPRDARQDQPTRPQKRDSVAPTQGQTQPQAHTQAHALSGKSQPPHLPVGSQSNPMSDFVAPHWPGADSAQDSPHSSPPMSARAGTEKTRSVNPTAINMNIVANNKNSAKSAPQREPHALHVRRGLGQRAVAADWFRPAVDNRGEQQSDARTEQRRIAQDDPSSDASGEQPAAKRRRGHGFASGVSRDAPAANLQRHLARVAARSAAARDKAWSPFSS* # ORIGINAL: g5379.t1 original gene structure, not modified by PASA NODE_403_length_24526_cov_42.1106 AUGUSTUS gene 3745 10005 . - . ID=g5379;Name=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS mRNA 3745 10005 . - . ID=g5379.t1;Parent=g5379;Name=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 9829 10005 . - . ID=g5379.t1.exon1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 9829 10005 . - 0 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 9417 9569 . - . ID=g5379.t1.exon2;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 9417 9569 . - 0 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 8915 9133 . - . ID=g5379.t1.exon3;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 8915 9133 . - 0 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 7809 8574 . - . ID=g5379.t1.exon4;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 7809 8574 . - 0 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 7323 7529 . - . ID=g5379.t1.exon5;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 7323 7529 . - 2 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 4125 7101 . - . ID=g5379.t1.exon6;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 4125 7101 . - 2 ID=cds.g5379.t1;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS exon 3745 3913 . - . ID=g5379.t1.exon7;Parent=g5379.t1 NODE_403_length_24526_cov_42.1106 AUGUSTUS CDS 3745 3913 . - 1 ID=cds.g5379.t1;Parent=g5379.t1 #PROT g5379.t1 g5379 MAGPLQFGLPVVDYVALIGAAKGPPMPLFTGGSGGIGVDMDSSSHIPITDIVLISLGQPCPEGYVQVDGDLGNRSYVCIKRGGDEKQAITEIFTATVLDAGVPGLFDHAGTNRAEAAIMSSLRLLISPETQGRDLLPLTSEIATHASFLCTACKSAADAVLHTAVKQQFTAHSRSIAKGASALVASVRDLVQQRTDDARARLNDCARHLKAAVEALTAFTQCEAIPQGAFLVTRPVDTSGLGASTFALYIARDPSKAPVVDVLVLPAAQGAVPPPPQYAVCDTITFNTSVSNPYESKARMCIKRAQRYPEINVAYRASILDRHPLTDLPDFPLPQALPFFCLPDGVIYHAKERKPHFFTFVLTDSLGSRLYCNCLVFYERVQIDADGTVATAWAPKVLCVISHYAFYAMFARYLRCLHESMQVPSEVPLERVISNLFEVPVPPPGRIAIQVSVGTNSVVFSRPPPNDYPMADYSLLPLFHALDLENVVSFFSLILAERKVVVQSSHYSLLTPVCEALCALLFPFRWQHVFITLCPAVLMDFLQAPMPFIIGVKSGGVDISTLAPDVFVVDLDQNQIVRNADGNGPAAPQSGLPWRGKYRLMESLRREGCAANLFIKNYAQMEAIDSHPYAEPASPYPGFKSANQSRMEQIREAFLAFFVSLFGEYRDFLRPPTAETINDYDMDDLDRMFDMAGFLRSQMPENRAFVESFMERQAFARFLEERADFSGREHEFTFFDSCIDTMKSRPLGRGSLASSTGYLPGVIAQPTPTPAPILPTPAGVSSALGSSALLMGSSPTGGGSIGFLQAGPSISLHGALSSSSTTSGGAGGSLYRVVRFPPPEMGGLPPGKTYYYGGQFGGFDRKMFVPPRRHNINLRTLSQRAGDGGRTDGHHDDEMGGTPSLMGLGRRPSISYRDSGDLDDQEGGNGAQASHSQSQSQAQAQSAAPKGPELADAHGTARQFLRTIYNAWFLVFSTYVPFSADPDAAFAFSSGVLERMEWAGIPADETIFRYLLEACARAGLSRHAKAVLKMLGDAGIAPNAVTTGLFVKAVAGEQAGPAVLRLIAQQASSDSQATPLSAVARLRSDSIRAVRSASFREAASAVIAAQASNEDRRRSSVAAVVVSETEKSSDGATKGKEADVPQQGGEKSSENPPEKKMEKQPSEKELEKAPVITWMSDVFSLGSVVIESRQVCSSCQTSVCEEDVLIGWAVNRSVFKTVCPRCDSAFLPALSWQGVVSPATLTPQVKPAGKCPYLSPAMFLKEIDILIGQGDGVEFRKSPARLMAEHPTVFWNMHWYFGNLQLPTSASALRRTIIRSVPPGAEPRTSLRPNMVPATPATPATASSLLQATSPAHGGMGKTDRNSRLSAWWLGHESVQNGLRGVVTAHFRVAGGTSRLHHKPARKISTLCSLPISADDVTEKNDAVTQALAECAIALDEKNVRRAMEVFLSARSRCPRREHDGSAILHGRMYAVLYSLTTRHSFATEKVFTDAYKRELSSLRAGVKEELREATDAVPSEPYVAFRSTFEYLRPSFHPPWGVRVGAASHCAFVFGKAA* # ORIGINAL: g13084.t1 original gene structure, not modified by PASA NODE_2721_length_5342_cov_35.9687 AUGUSTUS gene 153 4904 . - . ID=g13084;Name=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS mRNA 153 4904 . - . ID=g13084.t1;Parent=g13084;Name=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 4616 4904 . - . ID=g13084.t1.exon1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 4616 4904 . - 0 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 3766 4209 . - . ID=g13084.t1.exon2;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 3766 4209 . - 2 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 3288 3510 . - . ID=g13084.t1.exon3;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 3288 3510 . - 2 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 2522 3081 . - . ID=g13084.t1.exon4;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 2522 3081 . - 1 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 1887 2249 . - . ID=g13084.t1.exon5;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 1887 2249 . - 2 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 1013 1226 . - . ID=g13084.t1.exon6;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 1013 1226 . - 2 ID=cds.g13084.t1;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS exon 153 661 . - . ID=g13084.t1.exon7;Parent=g13084.t1 NODE_2721_length_5342_cov_35.9687 AUGUSTUS CDS 153 661 . - 1 ID=cds.g13084.t1;Parent=g13084.t1 #PROT g13084.t1 g13084 MMILPAPQQSQTLLGLSGVVTCRRSPVQPPNALRFDVDASYYNVAVIRATVTFPGYDGGNVTRAYWGINLDGECSRPAVWSPMLTSGDMVAWTAKRTSRCLLACGMRSRFDRCNATGPSDCPASRAQSPLAARLQTGLPGQVLPVQVSLLTDKANTAVTQLQYAMAWQSSPNVMPAMACRAVGANSPDNAQYDLFFDQYVAAFNPMRLVINTTSGTTKVVLGLPCDESPSFDSGNYVWGTVTRQAPPPSYASIVRALYPLMHISFGASPASTFKGVFNVTDGTADTIGLLGPIKTVSPGLVVDDADADAAGLLIGAGARVIFKPILSPFFGFTLEGWFLFNDTASSILPATPLTIVSLGTTKLNLTSIVVTSTANNYIQLDVSVRFGPSVNDNVRISAGALMVVSSPYSPTGGSLPALTHIVVTASLVSGAVSVYIDSVLAAQGAALSPPYARPYDMGLSVTLGDTSNKAVFMVDEIALYGFVLDNDVITAHRTCGGAALCEMPSSCAPYAITGKACPASVIGDWKTTSIVSRDEIAHYISKLPSNYTQVYSISDDLVTVQKHIIFCRQIAASSFAVELVRLKDGGIVRGTFVVNPNGNNATVFLSEKSQGCSAVASQMSTTYLLKGAVGAYAANVKLSKPLLYIPFTRNTADGLSGDSVLPLKPVSVSPANLASNVTFVTNSIVVNADPFDSAHIFGRAYYVLPLFALNGTGVSFEFWFLIPAAGNMLGSFFLFTHGTDDALRLTVVSVIDSSTLRLTLETPSARMVVPDLNTFNMTVRVDTPYHIVIAYSSVTGAFSIFLNAQQQIFSTVGSPGQLNMPSSTFSLGDVTSGLAVVIDEFVVYPYELTVEVASSHYACGTNGTCLP # PASA_UPDATE: g1555.t1, single gene model update, valid-1, status:[pasa:asmbl_5302,status:12], valid-1 NODE_2956_length_4644_cov_41.568 . gene 52 2364 . + . ID=g1555;Name=g1555.t1 NODE_2956_length_4644_cov_41.568 . mRNA 52 2364 . + . ID=g1555.t1;Parent=g1555;Name=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 52 232 . + . ID=g1555.t1.exon1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 52 232 . + 0 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 524 620 . + . ID=g1555.t1.exon2;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 524 620 . + 2 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 1005 1158 . + . ID=g1555.t1.exon3;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 1005 1158 . + 1 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 1368 1566 . + . ID=g1555.t1.exon4;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 1368 1566 . + 0 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 1831 1993 . + . ID=g1555.t1.exon5;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 1831 1993 . + 2 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . exon 2154 2364 . + . ID=g1555.t1.exon6;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . CDS 2154 2262 . + 1 ID=cds.g1555.t1;Parent=g1555.t1 NODE_2956_length_4644_cov_41.568 . three_prime_UTR 2263 2364 . + . ID=g1555.t1.utr3p1;Parent=g1555.t1 #PROT g1555.t1 g1555 MVTWSRPLPQNFDMLLAYLRVVHCNCFYCGVSCEHPEELDRICAPYHVRVAARDSYVESEVAVREHETRIRHLITGRLPEKDLEKVGLRDAAVEAAAFVKENVAQVEPEKYRCNVCSKLFKGPEFVEKHIYARHEDKVGEAKEKAEMFNRYASDPFHITSSGGAAGARETKPIPAQLAARLSWNAPPSASAGAGGPPPPQPKMTSLLPPPVPPVSFGFPPPMPPPFIPGAPYPGRDHVGPMMGHDFPPYGPGRGDRFAPYRRDDRPSMRDRPPRNYVDLDNPAGALGATAGRNLVNYGDI* # PASA_UPDATE: g1556.t1, single gene model update, valid-1, status:[pasa:asmbl_5301,status:12], valid-1 NODE_2956_length_4644_cov_41.568 . gene 2676 4480 . - . ID=g1556;Name=g1556.t1 NODE_2956_length_4644_cov_41.568 . mRNA 2676 4480 . - . ID=g1556.t1;Parent=g1556;Name=g1556.t1 NODE_2956_length_4644_cov_41.568 . exon 4294 4480 . - . ID=g1556.t1.exon1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . CDS 4294 4480 . - 0 ID=cds.g1556.t1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . exon 3984 4093 . - . ID=g1556.t1.exon2;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . CDS 3984 4093 . - 2 ID=cds.g1556.t1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . exon 3595 3661 . - . ID=g1556.t1.exon3;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . CDS 3595 3661 . - 0 ID=cds.g1556.t1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . exon 3356 3397 . - . ID=g1556.t1.exon4;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . CDS 3356 3397 . - 2 ID=cds.g1556.t1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . exon 2676 2891 . - . ID=g1556.t1.exon5;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . CDS 2845 2891 . - 2 ID=cds.g1556.t1;Parent=g1556.t1 NODE_2956_length_4644_cov_41.568 . three_prime_UTR 2676 2844 . - . ID=g1556.t1.utr3p1;Parent=g1556.t1 #PROT g1556.t1 g1556 MFVSNFWLSDLNQLNLIFNVIGTPTSEDLVCIGNDKARAYIQSLPSKKRVPWSTIFPNASELALDLLDKMLTFNPENRITIDDSLAHPYLQQYYEPDDEPVAEAPLTFDYDEENLPTPMLKEIIYREMVEFHDRKAAENAVLTPVDMDTS* # ORIGINAL: g3726.t1 original gene structure, not modified by PASA NODE_3137_length_4226_cov_26.6597 AUGUSTUS gene 1 852 . - . ID=g3726;Name=g3726.t1 NODE_3137_length_4226_cov_26.6597 AUGUSTUS mRNA 1 852 . - . ID=g3726.t1;Parent=g3726;Name=g3726.t1 NODE_3137_length_4226_cov_26.6597 AUGUSTUS exon 1 852 . - . ID=g3726.t1.exon1;Parent=g3726.t1 NODE_3137_length_4226_cov_26.6597 AUGUSTUS CDS 1 852 . - 0 ID=cds.g3726.t1;Parent=g3726.t1 #PROT g3726.t1 g3726 MSTIVIEVPSQSLSSPLAAFDLDGTLIKTKSEKPFPTRHTDWQFAYSNVPDVLRKFYNDGYRVCIVTNQASRTSRTFEDIGLLRAKLVAIVEAVGVPISVYAALEHDEYRKPSPGFYHMICRNGRPSHAFFCGDAAGRSGDFANSDLMFAKNAGIEFKTPEMVFEPTPTPTFVTLTDDDFAQIADYSSQQVVLLVGLPGSGKSTLAKQFEERGFEIVNQDTLKTLPKCKSACRTALAHGKGVVVDNTNPTKKVRAEYVQIAAAANVRISAIVMDVSVEVAKQNL # ORIGINAL: g8650.t1 original gene structure, not modified by PASA NODE_190_length_32708_cov_53.4493 AUGUSTUS gene 4153 6215 . + . ID=g8650;Name=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS mRNA 4153 6215 . + . ID=g8650.t1;Parent=g8650;Name=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 4153 4234 . + . ID=g8650.t1.exon1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 4153 4234 . + 0 ID=cds.g8650.t1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 4406 4446 . + . ID=g8650.t1.exon2;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 4406 4446 . + 2 ID=cds.g8650.t1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 4760 4934 . + . ID=g8650.t1.exon3;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 4760 4934 . + 0 ID=cds.g8650.t1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 5139 5245 . + . ID=g8650.t1.exon4;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 5139 5245 . + 2 ID=cds.g8650.t1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 5697 5837 . + . ID=g8650.t1.exon5;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 5697 5837 . + 0 ID=cds.g8650.t1;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 6105 6215 . + . ID=g8650.t1.exon6;Parent=g8650.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 6105 6215 . + 0 ID=cds.g8650.t1;Parent=g8650.t1 #PROT g8650.t1 g8650 MADDDLEAMLAALTEDLNLVGTGVDPLGRCSKCSEHVLKKEDGCDALGKLWHNKCFVCDSCKTELKTVGYFDLNGLPHCEKCYVDKMCDKCSTCHKPLIDEAIKAMGMNFHPACFKCASCSKNLNGERYLEKDRAAHCETCYAKLTAPICTSCAQPIIADGKDNFCMKIGEKRYHSKCYSCASCKAAFTSEEGKGAYAFEDKLFCKDHYIEKKKTSQK* # ORIGINAL: g8651.t1 original gene structure, not modified by PASA NODE_190_length_32708_cov_53.4493 AUGUSTUS gene 6723 9521 . - . ID=g8651;Name=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS mRNA 6723 9521 . - . ID=g8651.t1;Parent=g8651;Name=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 9387 9521 . - . ID=g8651.t1.exon1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 9387 9521 . - 0 ID=cds.g8651.t1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 8418 8657 . - . ID=g8651.t1.exon2;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 8418 8657 . - 0 ID=cds.g8651.t1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 7842 7976 . - . ID=g8651.t1.exon3;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 7842 7976 . - 0 ID=cds.g8651.t1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 7391 7535 . - . ID=g8651.t1.exon4;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 7391 7535 . - 0 ID=cds.g8651.t1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 6905 7062 . - . ID=g8651.t1.exon5;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 6905 7062 . - 2 ID=cds.g8651.t1;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 6723 6758 . - . ID=g8651.t1.exon6;Parent=g8651.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 6723 6758 . - 0 ID=cds.g8651.t1;Parent=g8651.t1 #PROT g8651.t1 g8651 MSRADPAVYGSMNCYELGKKLGSGQFSTVYSAVVLGTREKVAIKKVPLHDIQDSKARADCLKETDLLRQLDHPNIIHCFAAFLENDELNIVLELADAGDLLLMIKHFEKNNKRLPEKVIWKYFVQVCSALEHMHSRRVMHRDLKPANIFVTRDGTVKLGDLGLGRFFSTQTRAAQSLLGTPYYMSPERLHESAYDFKSDIWSLGCILYELAALHSPFYGKNMNLSMLLRKIEKCEYPPLPTDIYSDDLRDLVDQCIKINPEERPDIAAIHKIARGMHNHYSK* # ORIGINAL: g8649.t1 original gene structure, not modified by PASA NODE_190_length_32708_cov_53.4493 AUGUSTUS gene 213 3568 . - . ID=g8649;Name=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS mRNA 213 3568 . - . ID=g8649.t1;Parent=g8649;Name=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 3535 3568 . - . ID=g8649.t1.exon1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 3535 3568 . - 0 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 3159 3257 . - . ID=g8649.t1.exon2;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 3159 3257 . - 2 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 2749 2901 . - . ID=g8649.t1.exon3;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 2749 2901 . - 2 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 2260 2333 . - . ID=g8649.t1.exon4;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 2260 2333 . - 2 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 1802 1981 . - . ID=g8649.t1.exon5;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 1802 1981 . - 0 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 658 763 . - . ID=g8649.t1.exon6;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 658 763 . - 0 ID=cds.g8649.t1;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS exon 213 288 . - . ID=g8649.t1.exon7;Parent=g8649.t1 NODE_190_length_32708_cov_53.4493 AUGUSTUS CDS 213 288 . - 2 ID=cds.g8649.t1;Parent=g8649.t1 #PROT g8649.t1 g8649 MAIANKRVLYVGGLAEEVDATVLRAAFLPFGDLVDIQLPMDYATEKHRGFAFVEFEAGEDALAAADNMNEAELFGRTIRVNFAKPARGKEGSSRAVWSDEQWLKEHAGETLKTTDGDAMQTEGGEAKGNPQVPSTAPDGASAQTTAADDGARAAKRAKSHSRVYFDISIGGKAAGRVVMEMCQGGDFTKHNGTGGKSIYGEKFEDENFTLKHMGPGTLSMANAGPNSNGSQFFICTEKTS # PASA_UPDATE: g8652.t1, single gene model update, valid-1, status:[pasa:asmbl_2986,status:3], valid-1 NODE_190_length_32708_cov_53.4493 . gene 10161 12689 . + . ID=g8652;Name=g8652.t1 NODE_190_length_32708_cov_53.4493 . mRNA 10161 12689 . + . ID=g8652.t1;Parent=g8652;Name=g8652.t1 NODE_190_length_32708_cov_53.4493 . five_prime_UTR 10161 10241 . + . ID=g8652.t1.utr5p1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 10161 10457 . + . ID=g8652.t1.exon1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 10242 10457 . + 0 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 10617 10810 . + . ID=g8652.t1.exon2;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 10617 10810 . + 0 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 11061 11201 . + . ID=g8652.t1.exon3;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 11061 11201 . + 1 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 11529 11608 . + . ID=g8652.t1.exon4;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 11529 11608 . + 1 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 11773 11921 . + . ID=g8652.t1.exon5;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 11773 11921 . + 2 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 12165 12287 . + . ID=g8652.t1.exon6;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 12165 12287 . + 0 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . exon 12512 12689 . + . ID=g8652.t1.exon7;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . CDS 12512 12673 . + 0 ID=cds.g8652.t1;Parent=g8652.t1 NODE_190_length_32708_cov_53.4493 . three_prime_UTR 12674 12689 . + . ID=g8652.t1.utr3p1;Parent=g8652.t1 #PROT g8652.t1 g8652 MASRLAKGGGGPCSACDNATIAGRLGHFECLWWRIARSGMDFSGVQEESSEDARGDTAMHSSAANGKTECLQWLVVNGGSPSCENEHGRVPAHGAAANGHLECLRLCAVEDACVAVDKNGDTPLHLAAVNGHTECVGLLLERSPADLVDAPNTRGWTPLHSAASRGHMATVRRLIDGRATVTLRALDGSSPADIASRGGHREVATLIMAQGPASVRVYSNRVASFAESSLPFIYVALGLFFAAAACAGHFSPELFEIFFPGTSILSHAFRGLLTIYVSLVAIFSVMLATEQRRPATFASLLIMLSVFFLAWTVSTVAYREVSDSLRVVALVSGSAAAWLSLARGSVSHKSVKRE* # PASA_UPDATE: g8654.t1, single gene model update, valid-1, status:[pasa:asmbl_2987,status:12], valid-1 NODE_190_length_32708_cov_53.4493 . gene 23543 32422 . + . ID=g8654;Name=g8654.t1 NODE_190_length_32708_cov_53.4493 . mRNA 23543 32422 . + . ID=g8654.t1;Parent=g8654;Name=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 23543 23659 . + . ID=g8654.t1.exon1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 23543 23659 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 23860 23946 . + . ID=g8654.t1.exon2;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 23860 23946 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 24309 24467 . + . ID=g8654.t1.exon3;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 24309 24467 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 24645 24791 . + . ID=g8654.t1.exon4;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 24645 24791 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 25081 25427 . + . ID=g8654.t1.exon5;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 25081 25427 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 25675 26650 . + . ID=g8654.t1.exon6;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 25675 26650 . + 1 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 26808 27095 . + . ID=g8654.t1.exon7;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 26808 27095 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 27246 27697 . + . ID=g8654.t1.exon8;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 27246 27697 . + 0 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 27886 30851 . + . ID=g8654.t1.exon9;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 27886 30851 . + 1 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 31138 31213 . + . ID=g8654.t1.exon10;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 31138 31213 . + 2 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 31528 31877 . + . ID=g8654.t1.exon11;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 31528 31877 . + 1 ID=cds.g8654.t1;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . exon 32079 32422 . + . ID=g8654.t1.exon12;Parent=g8654.t1 NODE_190_length_32708_cov_53.4493 . CDS 32079 32422 . + 2 ID=cds.g8654.t1;Parent=g8654.t1 #PROT g8654.t1 g8654 MVPTKYKAQQALVKYVKDHKKAGKGRPQADSNPEYYELTKHAESEELESRQDQLRMRSTPIVYGQVVQLRHAISGRYVKVMSGETALLDRNCIRVELDKHGGKGCHFRIVPRYKVRSEGDQVQKDDRLVLESMKTNGQYLGCSARSLFATPSIDTGSHEVSTSVSAGTFNIGIHSSALNFDTDPTLLRGGQIMRLFHSEHEGYLSAEGAFFGRDAHTRPEWGESVHLRLRSRTTKNDQGDSDSGSVRAEPTAPIVFWQLEHADAPMSGGPILWQEACRIKHVPTKSYLSVAPGRDGTKPSVFLTSTASSTFDRSDRNTVFRLHPMAEESSASPAKLGSFFQIQHAVSGLWVGSASDAPEFSRERYRLIKGDREGLSGLRWDKAQLRCITVSEEKSIDDAFVASPVDEEVVHAANTVAFSVPLIANYIRAVLGFSGDTQNLTGGSKTCRAAEERLSRACLGHLGRFVMVDGRPNRRRQKLLRHFRVADLLQELILSISARMASTNRPQVLASESSIEEMMSGAYALLVKFLLAGCRSNALYVARHVPFFMERLRGANASSSSSVHSTSQSTSKRIAQGSAIDVLTALVEGNISIVERIGLEQIKCIVRYLETDRDPVYLRFLSRLCFCAGEDVTVRQNEVLEQLVTARRDTLFLQTQFQSNNGAGSILVTIAPGVVVPLENLSSNKTSGDAAAGRLRSSTHGTKKMSEDAPATSGGLLTVPGAAGTGSQRRSLVSDTSISQQSTLASAYRFFKAQLELISSLCAGKNKVSIEALRERKIISWDECLCALRNGNVSNRLRGRYANLIVSAFIDVGSPEGTTVEEHGVLSFVKDALGQMNDRTRANTERKRAELSARADGKDVVQRMMDWIESYFAQEFAREPIIDASTAPSGFFGDQRSKNYFVGTLLNLIYRLVRNGFYSGPGDAERLFRKLLPLLDGKKDRPSANPVNAAEQQSEFVRNSMVPTGHNAAGYVALKDAARDAQTKHQAEEERKNLEKKQLEGWTKKDRFVRSANNDLIAQTRCRALDILRLLFSQRLDIRLRKFLILYVAVDELVKNPSKVSEKRLFARTEIPAEVLLPLTRKDGKVSPKDINKALADFFISQDQNTDFLASSGDPRIGGVAAVAGNFHHGAQDLQLSQPAGAHGIPYGTTLVRRLLDLSRYEFPGLVVRCVEILDDYYGQNRLLFDKAMDAMLLVHPDSVTFSTTIVIPQMTFVEDMTQSDWEPKDAKRLCGILDEFTENCVLKADSEAAHRSNQEILDNARLASLAFGLLLHPMDLDVAENARNFARVAVSCLKLMRALARDNPLKKRMFFEKLDVLLNHKLADLQLPDAGTNVSKELALCVAEIFRGDQELCLAIREQHIERMVQLLSMHGTKAPEWIDALRSFVEVTGRSGTENLRHNQGHVARYLLRHRKKVLVMISDEENDARLEMLRQKDETPELSYHLRLVDLLASCARGDGNKHIESLCQSIFDPDELFEVLCSTAISMSRKRPYIQFLLTVYLEAEEVDAGDDMNELGGGGPSSFGGNFNATPGDPLAPGGASTSTKTIVDPLEPASQTWTFLHMAKAFVQTVVTSVSSGAVSAKGLTMATRRGNRRNEKSDSAVEGVMVMLDAIVPLYHRLLEQFYHPDDVTETQDALLVSFGRLIAQFVDVASAIVRTRSQWLTLNSCVMIMIQKLPALADGPNPVKSPSNAGMDDDGDDNDRNEEICKHRLEFAEERELNNRLVSFVARLKHEIAGHNEEYHDCPRALSADIAQRDPSWAYDPACPYERNELPRGAEFQNLLEAFDGAIDREAAAGTGRRKKGVRKDFAKYFGSIIRYLKYKYVTADDGDDSVFVNADRWMDDEDLEVRCLQLMRGMVQNLKCRIKPSESTGELHEAAWNAVEEVQNALIKLGACDAVCYLFNSTSDRVVTEALRAAVALLDGGNRLAQDKFRIYLTGTLHDNAIFSNVQKELWSATITIKEKRTMELQKRRKAEKSKELVNTLQGSERLKANAIVNHPDESQSMELQVMGSTKPVQSSSAPAVEEPEKTESNKAIVEVLRMLQLLCEEHNIPMKNLMRVQAGGSLKTINIVQESVRFFMSIYRFLDTNDSRALIVQVRG* # PASA_UPDATE: g8653.t1, single gene model update, valid-1, status:[pasa:asmbl_2985,status:12], valid-1 NODE_190_length_32708_cov_53.4493 . gene 13934 19950 . + . ID=g8653;Name=g8653.t1 NODE_190_length_32708_cov_53.4493 . mRNA 13934 19950 . + . ID=g8653.t1;Parent=g8653;Name=g8653.t1 NODE_190_length_32708_cov_53.4493 . exon 13934 13987 . + . ID=g8653.t1.exon1;Parent=g8653.t1 NODE_190_length_32708_cov_53.4493 . CDS 13934 13987 . + 0 ID=cds.g8653.t1;Parent=g8653.t1 NODE_190_length_32708_cov_53.4493 . exon 14217 19950 . + . ID=g8653.t1.exon2;Parent=g8653.t1 NODE_190_length_32708_cov_53.4493 . CDS 14217 19862 . + 0 ID=cds.g8653.t1;Parent=g8653.t1 NODE_190_length_32708_cov_53.4493 . three_prime_UTR 19863 19950 . + . ID=g8653.t1.utr3p1;Parent=g8653.t1 #PROT g8653.t1 g8653 MDDPQSAIQRDYHLHLHEVLWRALRVRGNNAAVKEAEAHILQRSVADINAKETTKGRSAIHAAVNYSRSSELIDLLLNRGADVNANDNRRWTALHFASVYGHIDVVTLLLDRGADVNAVTTSRSSALHIASRNDCTGVVALLLDRGADMNAVDCKGLTALQIASQKNHVDVVALLLNRGADGSAVTTDGRLTALHIASQNDSTGVVALLLDRGADVNAVDNRRCTALHIASQNDCTRVVALLLDRGADVNAVDSKLWTALHYALSYRRMNVATLLLDRGAIFKAAHGRAKASPCAVLSAWGPGDVVALLAAMAANAHDDNNGQVWHLPKRYTNIVKCLLNQRAVDENRCTALHIAAKNGHMDVIKSLLDCGADLSSVNNRRCTALHIASEHGHTAVAVLLLDRGANVNAVEGSGWDALHFASVNGHTAVVALLLDRGANVSAVEGSGCDALLFASENGHSGVVALLLDRGANVNAVEVSGCTALHAASANGHSGVVALLVDRAANVNAVEGSGCNALLFASENGHTAVVALLLDRGANVNAVEGSGCTALHVASANGHTAVVALLLDRGADANAMETERRTALHLASQEGHVDIAALLVDHFADVKAIADLRRTALHNASQEGHVDVVAFLLNRGANVNAIDIDGRTALHLASKNGHVDVVSLLLNRGADASVVDANTHITALHIASKYGHTDVVALLLNRGANVNVIDSDGWTALHNASSHNSADVVSLLLNHGADVNAVRNRNTTALHSASRNNRADVVSLLLNRGADVSAVDANGETAFQIASRRGYSRVVSIFNHDHVANASNTDDLDMVVGNVPDNCRANLLTDRSADTNVVEGTGQTTLHSASEKGHTDVVASLLDGGADANAVDKNGKTAVQSAIASGFTDVVFVLITRNATVSPQLFSSVKQGHIGILELLLAAHVGSNSSPLVDDAIGCQSPDSRRRLKECMRLQSEWSVSSGAPLPLLTVASRALAATRLERVTPRRLPSSIDDAVDILPLASLLGEVLDGIPVSPTHSQEFTAALSSQTEYERLQRELAATTEATALVELVAKRDTARDALMSAVVVLQERFGDTSGANSLLRIAETAERMRGQLVTWIDRPDNDAPQSIELDVDGIRRCLDWHKTWCTAWDEERVRYAANTERCGKRTAAYAKSIASHFEGDQHASLNELRLLHIEGIAASLRVILAAWDEILSISHTRSPYEARLRQFAPVVDVYLRAFVRDVRAGWDELRRLVGFASATREAALNAPRVPILKRQLQERAVQLRNAKRKHRDTLTDLTDAEHDGIDDVEVAAFKERVKAARHDMCGAEQAYSDAALEFVLLATRLPEYQADFRGDLANVMQLPELLKPGRSAAQYRMDRVLARAGGGSRRDVYLAVLDENGTEQQCVLKSFHLGSEKERKDFLSESRLLRSLRHPNIVSIEAVFIEDGATRYSELPQTIGYIQLDFCEKGDLLQWVRATMPSNARKQAVLRGALLGLEHIHRMGVVHCDIKPQNILVDASGRGIISDFDVSSEQSARTSTATKAATRVAGTDAYLAPELIRGDVSAANASTDMYAFALTVYDTYFPPDEVTGALQRPSMTQVAHRGVLIAIPATADAALSSFLASVFSAEARERPSSRDALGHVYFVSPPPLAPGDREGRATCICCMDVHSLANGVACSDANEGSHFVCNEDFERYVQSCAADDIAVLKRRDGQITCPDSVCGRRFDSRLVADHVTSQTFGAFIDSQRKLSAAIATLELDRVWNERLEQVRQAARPSREMVIRLHKEHIEERILTLRCPRCATAFVEFEGCFALVCGTCNAKFCGWCLVDCGDPLSEPNRANNLTHRHVVRCSLRRSVDPLYGDMALFERVQCERRQKATREYLLKVGDAGIAEAVLAACATQLEVLGVRINMGE* # ORIGINAL: g1902.t1 original gene structure, not modified by PASA NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS gene 93 3504 . - . ID=g1902;Name=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS mRNA 93 3504 . - . ID=g1902.t1;Parent=g1902;Name=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS exon 2518 3504 . - . ID=g1902.t1.exon1;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS CDS 2518 3504 . - 0 ID=cds.g1902.t1;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS exon 2117 2308 . - . ID=g1902.t1.exon2;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS CDS 2117 2308 . - 0 ID=cds.g1902.t1;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS exon 1040 1674 . - . ID=g1902.t1.exon3;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS CDS 1040 1674 . - 0 ID=cds.g1902.t1;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS exon 588 823 . - . ID=g1902.t1.exon4;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS CDS 588 823 . - 1 ID=cds.g1902.t1;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS exon 93 297 . - . ID=g1902.t1.exon5;Parent=g1902.t1 NODE_3325_length_3730_cov_37.0585_potentialcontaminant AUGUSTUS CDS 93 297 . - 2 ID=cds.g1902.t1;Parent=g1902.t1 #PROT g1902.t1 g1902 MGHKGLVKTTTGHVVNLVSNDVQRFDQLLPFLHFLWIGPLQCALMLWLSTREVGVSAVAGFALIFLLAPFQAWSAKVFVRLRRASAKLTDERVRVMGEVISGMRVMKMYAWEVAYSDIVQTLRSSEMAKVLRTGYLRAANLSFYFFSPALISFVTFVTFHYLGGELTPSRVFTTVSYLAHVRLSMTLFVPVAIQALSETRVALERLQNFLLHDEMRTKPSVVSQQRREKETKDAKDAKDAVDVNDARDAAVGGVSDKVGREDGSVAVCVEAAAETAAAEGAIAPGVTPHIVFEKFTGSWDVDKVTLSDVSFRCEGDHCVAVVGPVGSGKTSLLMAALGELEASSGRVGIAGRVAYAGQEAWIVSGTLRDNILFGKNFDADRYDRALEACALDKDIASFEDGDLTEIGERGITLSGGQRARVSLARAVYADADVYLLDDPLSAVDSAVGRHLFEKCVRGVLRGKPVVLVTHQLQYLSGADTVLVLDHGAAVAVGHLDALVRDGYDLTTLIGTAHQVGDEAPKEAKPERKEEKASGAALGGATGILRRQTTLKLIQKEERSKGSVSWEVYRDYFKAGGSVVTLVVLLVLSLCGQAALVTSDWWLSYWSSSDFNDRNRPQNIGIYAGLIGVTMAMSIARAILFFGVLLTASKFLHDTMFRRVLRAPIHWYDITPVGRVLNRFSKDIGLMDDMLPYTFYDFIQCAFMVLGTVLLVAVINPWVFIPLVPLVFLFYKLRVYFLSTSREIKRIDGTSR # ORIGINAL: g7530.t1 original gene structure, not modified by PASA NODE_3273_length_3857_cov_38.0772 AUGUSTUS gene 286 3535 . - . ID=g7530;Name=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS mRNA 286 3535 . - . ID=g7530.t1;Parent=g7530;Name=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 3424 3535 . - . ID=g7530.t1.exon1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 3424 3535 . - 0 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 3170 3271 . - . ID=g7530.t1.exon2;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 3170 3271 . - 2 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 2435 2840 . - . ID=g7530.t1.exon3;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 2435 2840 . - 2 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 1713 2232 . - . ID=g7530.t1.exon4;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 1713 2232 . - 1 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 1269 1452 . - . ID=g7530.t1.exon5;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 1269 1452 . - 0 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 646 927 . - . ID=g7530.t1.exon6;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 646 927 . - 2 ID=cds.g7530.t1;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS exon 286 441 . - . ID=g7530.t1.exon7;Parent=g7530.t1 NODE_3273_length_3857_cov_38.0772 AUGUSTUS CDS 286 441 . - 2 ID=cds.g7530.t1;Parent=g7530.t1 #PROT g7530.t1 g7530 MLKRRRWAFALEILCPIIFFLIAAAIRRTLTPTPVVAAVYDPDFIYPSIAFRVANASGVAPTIGYSPSTPWAQTIMTTFAQRANIAVANAGLFGGILVASFANEASLEAVVKENPTQYYANIVFNNVPDSLSTPLPAQARYTIRMCSGCTPSTDDQFAERVGGSEGPTGDKKYPASGFLFVQRMMDASLSYHMAGINVFNSTIKFTRFPYPAYSENRFARSIGGFLPLFMVLSWLFTVSMAVKDVVFEKERRLKESMKMMGLSSLQGWLAWWISTVSWLILSVIFMTGIAKGGKVLEKSDSGVVFIFFLLSAISAVSFAFMVSSFFTRASVGAAAGGVLFFLSYVPYLFVSNPTTYPTLSKNEKLGLSLLSPSCLGIGGKVFSNFEERGLGVKWSTIGTVEDITGGGGVSMSSVFGMLILDTVLYIIVTWYMENAFPGRYGVGRPWYFFITPSYWGWGHLRRQDELVQKLQGTRDFGATAQLAANTEEGPSDIPIGISIRGMSKLFEDAHKPAVDDLTLDMYEGHITALLGHNGAGKTTTMSMLTGLYAPTTGDAFVNGHSILDNMDGVRSSLGLCPQVDVLFDSLT # PASA_UPDATE: g2753.t1, single gene model update, valid-1, status:[pasa:asmbl_8014,status:12], valid-1 NODE_5358_length_890_cov_49.4564_potentialcontaminant . gene 1 884 . - . ID=g2753;Name=g2753.t1 NODE_5358_length_890_cov_49.4564_potentialcontaminant . mRNA 1 884 . - . ID=g2753.t1;Parent=g2753;Name=g2753.t1 NODE_5358_length_890_cov_49.4564_potentialcontaminant . five_prime_UTR 849 884 . - . ID=g2753.t1.utr5p1;Parent=g2753.t1 NODE_5358_length_890_cov_49.4564_potentialcontaminant . exon 1 884 . - . ID=g2753.t1.exon1;Parent=g2753.t1 NODE_5358_length_890_cov_49.4564_potentialcontaminant . CDS 1 848 . - 0 ID=cds.g2753.t1;Parent=g2753.t1;3_prime_partial=true #PROT g2753.t1 g2753 MLPFVSDRAVLFSVGMAVEKGDAAVVEAIYRECTARGIDSHKVAEHLFCGAARSGRIEAIDVAVRLSPVKLSELADKALEEVEYLFTDQAFMARFVERGLRRIFVNPRVDNVADMHELKVTWLTLLECFRCGNYEAAEVVEPRLTVEDLNSVLGSLLDDGNSFAAVQWLHKRRPVSEMAADELVRYYPESKHAMGETRRKLTVDYVDCVWPIAKTLPVYEGNIFSLLSGAWFRKAIELGDMPLLRHLCKKFDFVSIFNYNSAHRSECDAAAAGHYDVISFMI # ORIGINAL: g9039.t1 original gene structure, not modified by PASA NODE_327_length_26869_cov_41.312 AUGUSTUS gene 21369 21764 . + . ID=g9039;Name=g9039.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS mRNA 21369 21764 . + . ID=g9039.t1;Parent=g9039;Name=g9039.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 21369 21764 . + . ID=g9039.t1.exon1;Parent=g9039.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 21369 21764 . + 0 ID=cds.g9039.t1;Parent=g9039.t1 #PROT g9039.t1 g9039 MSPIASDIDAIAREFALFRGRRGHFAGGDWDEEVDAFNGRKHQVMEKMRIAIPENRLTLTQVVAKFGETDILLESDSPILGIIRRTDPSYAATVATTAPLRAYSWRGQRDFLYLYAGEAGPAVVAWFYLGE* # ORIGINAL: g9032.t1 original gene structure, not modified by PASA NODE_327_length_26869_cov_41.312 AUGUSTUS gene 1 3315 . - . ID=g9032;Name=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS mRNA 1 3315 . - . ID=g9032.t1;Parent=g9032;Name=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 3254 3315 . - . ID=g9032.t1.exon1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 3254 3315 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 3100 3152 . - . ID=g9032.t1.exon2;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 3100 3152 . - 1 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 2829 2917 . - . ID=g9032.t1.exon3;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 2829 2917 . - 2 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 2539 2616 . - . ID=g9032.t1.exon4;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 2539 2616 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 2357 2431 . - . ID=g9032.t1.exon5;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 2357 2431 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 2018 2123 . - . ID=g9032.t1.exon6;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 2018 2123 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 1655 1755 . - . ID=g9032.t1.exon7;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 1655 1755 . - 2 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 1467 1546 . - . ID=g9032.t1.exon8;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 1467 1546 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 1143 1314 . - . ID=g9032.t1.exon9;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 1143 1314 . - 1 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 825 953 . - . ID=g9032.t1.exon10;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 825 953 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 378 563 . - . ID=g9032.t1.exon11;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 378 563 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 1 115 . - . ID=g9032.t1.exon12;Parent=g9032.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 1 115 . - 0 ID=cds.g9032.t1;Parent=g9032.t1 #PROT g9032.t1 g9032 MSFILDSVVMMGSQLIFFGFGWIFFMRRLFKDYEIRQRAVQLIYSATFAISCTMFELIIFEILDVLDKDSRYFHWRLAICIMLFDLIFLLPYYQLVLFLANFRFSQSIRAYVAAFGLWLGYIYFFWKIGDPFPILSSKHGILTIEQGISRVGVIGVTMMAILSGFGAVSCPYTYMSYFLRHVSEGDVQMLERRMNQTIDMIFSKKRRIALAERERERSTALKDGAQGGRLGFFGRVFTSVVGAGGSGGDDLADGNIPALKQEIAAMEEFCRQMYLEIADQQAARERIAYSKTWKGRYFNALGYFFSVYCVYKIFMCTINIVFDRVGKVDPVTRGIGIVVDYLGIDFDVPFWSQQISFALVGVIIVTSMRGLLIKLTKFFYAISSSGSSNIVVLFLAQLMGMYFVSCVLLMRMSMP # ORIGINAL: g9038.t1 original gene structure, not modified by PASA NODE_327_length_26869_cov_41.312 AUGUSTUS gene 18760 20674 . - . ID=g9038;Name=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS mRNA 18760 20674 . - . ID=g9038.t1;Parent=g9038;Name=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 20018 20674 . - . ID=g9038.t1.exon1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 20018 20674 . - 0 ID=cds.g9038.t1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 19728 19891 . - . ID=g9038.t1.exon2;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 19728 19891 . - 0 ID=cds.g9038.t1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 19488 19638 . - . ID=g9038.t1.exon3;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 19488 19638 . - 1 ID=cds.g9038.t1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 19256 19375 . - . ID=g9038.t1.exon4;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 19256 19375 . - 0 ID=cds.g9038.t1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 18997 19154 . - . ID=g9038.t1.exon5;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 18997 19154 . - 0 ID=cds.g9038.t1;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 18760 18889 . - . ID=g9038.t1.exon6;Parent=g9038.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 18760 18889 . - 1 ID=cds.g9038.t1;Parent=g9038.t1 #PROT g9038.t1 g9038 MINQPTPHRDPHLLAEGELTPGISAAEYRKRRQQLAKALPPHSLAIITAFPTKIMSCDIPYPFHQNTDFLYLCGLQEPDAVMLIETGSEEEKKRGGHKMTLVLHRSDPSYELWNGPRCGLDGALKFFNADEAYSLEEMPTVVSEAASRAKSVFYDNRQPAHPENHATIAVCISRALSLNAETVHLQLSAMVQELRLLKTPAERDILRKAGVIGGEGFAEVMRRTRPGVSEGFLMAVLEGAVKERGAQFLSFPPVVAGGDMALILHYVRNSALLRNGEMVLVDGGAEYNGYVSDISRTFPINGKFSKAQRELYEAVLRVQKQSLQLCAQKDATLELIHQMSVILMGEELARLGIVKAKGEVDRLRETCLYYPHHVSHYMGMDTHDTGYIPRTRRLTSGMVVTIEPGVYIPRKAGIPEQYQGIGIRIEDDVLITETGPEILTGSAPKEIDEIEAVMASFMK* # ORIGINAL: g9033.t1 original gene structure, not modified by PASA NODE_327_length_26869_cov_41.312 AUGUSTUS gene 3896 4831 . + . ID=g9033;Name=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS mRNA 3896 4831 . + . ID=g9033.t1;Parent=g9033;Name=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 3896 3967 . + . ID=g9033.t1.exon1;Parent=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 3896 3967 . + 0 ID=cds.g9033.t1;Parent=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 4071 4141 . + . ID=g9033.t1.exon2;Parent=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 4071 4141 . + 0 ID=cds.g9033.t1;Parent=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 4513 4831 . + . ID=g9033.t1.exon3;Parent=g9033.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 4513 4831 . + 1 ID=cds.g9033.t1;Parent=g9033.t1 #PROT g9033.t1 g9033 MERKGRIATDVINRYVKHATAANKAEEETFMWNEWKRDKGLSDRSEERWGHGGFLELHPELQVSTATKRRRRNSDDDPSDSVSSSGGRSSGTDDSESHVRKRRRRSRTSKGTKEKKDKKHKRDKKEKKDKKRKRDKKEKREKTTREEGETQRR* # PASA_UPDATE: g9036.t1, single gene model update, valid-1, status:[pasa:asmbl_5827,status:12],[pasa:asmbl_5828,status:12], valid-1 NODE_327_length_26869_cov_41.312 . gene 11544 14330 . + . ID=g9036;Name=g9036.t1 NODE_327_length_26869_cov_41.312 . mRNA 11544 14330 . + . ID=g9036.t1;Parent=g9036;Name=g9036.t1 NODE_327_length_26869_cov_41.312 . exon 11544 13317 . + . ID=g9036.t1.exon1;Parent=g9036.t1 NODE_327_length_26869_cov_41.312 . CDS 11544 13317 . + 0 ID=cds.g9036.t1;Parent=g9036.t1 NODE_327_length_26869_cov_41.312 . exon 13645 14330 . + . ID=g9036.t1.exon2;Parent=g9036.t1 NODE_327_length_26869_cov_41.312 . CDS 13645 14306 . + 2 ID=cds.g9036.t1;Parent=g9036.t1 NODE_327_length_26869_cov_41.312 . three_prime_UTR 14307 14330 . + . ID=g9036.t1.utr3p1;Parent=g9036.t1 #PROT g9036.t1 g9036 MGVEDDNSGSCDSSSTGTGGVLYEYGFQDSDNHTDSTDYDDDDDDDGAIDGAAAPAHSAASFSNEFAKTRATVTSSRIKSSALETLSVARGSNRLLSRPKLDPPRSRLDHAMLPRAVDSEGQASATYVTGSKTTMKPIASPIAWSPVDTDVAASQLRGHINSLPTELLVCIFSRFDVVDLVRCVAPVCRLWWNISRDWSARRLFSIDSCRLGGFNVRPIALLGLLSGCPLLTELRLGCYYAVSDPLLEIVSVTCKHLRVLDIAFAVDITEAGIECILSRCSRLSWLNIEGCASVGANALATMACLPMLRHLNLSHCVRLFEDMLGPFLASRGDHSRCVVASSAAVPRRRSSGELQHGAQSSVANHRALPVVPDNAPHGEYIAGMISAAQKRRSSLINGVEVEYTADSDAWRATDGLVHDALRFQLPCAGLVSLNLDGIESVCDSTVSMLACGCHSTLRHLALDGANLSDDAIRTVAGRLKKLVTLSLSFSESLTDASLDAIGSGLSLLQVLRLRKGPAFSPEALLAMFKAVGGSLVHADISECHGLTDDAAVAIGEFCRNLRRLNIAWCWSVTDVGVTTFARLLQLEALDLCGCHKITDQSLAVLGQHLVHLRYLNIKQCNAAGISSPLFSLLAIPGLTVIDYYDVPHIIQAKRPSSTSSRAAASAVHKLLSSACSANPAEARPPSPSTDFDLDERPSNNARCRASKALAASKSHRREEMKATEEPDAQQPLSRHGDECGRGICEVASSGTSYDNSSADECLEDLRGDTNGADGLSVVVDVPRFQVVIGVVGAVESPFDSVWADRYILLKD* # PASA_UPDATE: g9034.t1, single gene model update, valid-1, status:[pasa:asmbl_5821,status:3], valid-1 NODE_327_length_26869_cov_41.312 . gene 5023 7654 . - . ID=g9034;Name=g9034.t1 NODE_327_length_26869_cov_41.312 . mRNA 5023 7654 . - . ID=g9034.t1;Parent=g9034;Name=g9034.t1 NODE_327_length_26869_cov_41.312 . five_prime_UTR 7613 7654 . - . ID=g9034.t1.utr5p1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 7543 7654 . - . ID=g9034.t1.exon1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 7543 7612 . - 0 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 7385 7423 . - . ID=g9034.t1.exon2;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 7385 7423 . - 2 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 7137 7283 . - . ID=g9034.t1.exon3;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 7137 7283 . - 2 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 6770 6892 . - . ID=g9034.t1.exon4;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 6770 6892 . - 2 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 6532 6631 . - . ID=g9034.t1.exon5;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 6532 6631 . - 2 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 6055 6241 . - . ID=g9034.t1.exon6;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 6055 6241 . - 1 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 5783 5865 . - . ID=g9034.t1.exon7;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 5783 5865 . - 0 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . exon 5023 5576 . - . ID=g9034.t1.exon8;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . CDS 5129 5576 . - 1 ID=cds.g9034.t1;Parent=g9034.t1 NODE_327_length_26869_cov_41.312 . three_prime_UTR 5023 5128 . - . ID=g9034.t1.utr3p1;Parent=g9034.t1 #PROT g9034.t1 g9034 MDGWKHFALTGVVSALALSQFVLAAPSCDGGACATDGFNGALASNGTADGGDDSKSALKGYLAAVVAVLFFGSNFVPVKKFDTGDGMFFQWVMCAAIWCEALIVASIQGYPKFEPLAMFGGFLWCTGNITVVPVVKMIGLSLGMLIWGSTNLIGGWASGRFGLFGLDKQVPKNNVMNGLGVAICVVSIFVYMLVDSKGKETKEAHYSPAQVQEESEALLYDKSSAAADNDAPSDESWVDKLNPTTKRILGYTLAAVAGLFYGFNFDPVQYIIDNRTGASQNGLDYVFSHFCGIFLTSTVYFLAYCAYMRNRPKVYPRIILPAFISGVMWAIADTAWFIANQNLTQTISFPIITTGPGIVASLWGIIAFGEIRGMRNFIVLGSAFALTFTGVALTAVSK* # PASA_UPDATE: g9035.t1, single gene model update, valid-1, status:[pasa:asmbl_5823,status:12],[pasa:asmbl_5825,status:12], valid-1 NODE_327_length_26869_cov_41.312 . gene 8209 11044 . + . ID=g9035;Name=g9035.t1 NODE_327_length_26869_cov_41.312 . mRNA 8209 11044 . + . ID=g9035.t1;Parent=g9035;Name=g9035.t1 NODE_327_length_26869_cov_41.312 . five_prime_UTR 8209 8391 . + . ID=g9035.t1.utr5p1;Parent=g9035.t1 NODE_327_length_26869_cov_41.312 . exon 8209 9633 . + . ID=g9035.t1.exon1;Parent=g9035.t1 NODE_327_length_26869_cov_41.312 . CDS 8392 9633 . + 0 ID=cds.g9035.t1;Parent=g9035.t1 NODE_327_length_26869_cov_41.312 . exon 10042 11044 . + . ID=g9035.t1.exon2;Parent=g9035.t1 NODE_327_length_26869_cov_41.312 . CDS 10042 10818 . + 0 ID=cds.g9035.t1;Parent=g9035.t1 NODE_327_length_26869_cov_41.312 . three_prime_UTR 10819 11044 . + . ID=g9035.t1.utr3p1;Parent=g9035.t1 #PROT g9035.t1 g9035 MSGDGPPHLTQVEADEKHGQHDAGRGSDPTMAPSFIPADCERSQVKAGPNGELVDVWVETRMRLGGNTKGHTDKYYYFEAFPRRKLRSLKEIQRLLADQWPSYRSWADGNGAGGGAGGGNDVPNTPTRKQVAGGSVADAGRKGRVIERDAGTQEEPKQTRVAKEAKKSPGKIKGAHNELSEGNVSSADEEVKKRKAASDESPAVRQPRARTNIKGAVAKPSPDPAGARCLIQTPTKGVGAGLATRLKAESVAAHGEGGPSTAKASAVRTGVTNEPPKPKRGKMAKTTAFKRAAVSAAIASASGVVANPPPTTPAVIVAPATPLGEGGTETKKRKRGSVPASTAGATAANVADRALVIDESEDSDDYERSRGFRNMRTSLTSRVRAVSDTAADCPERVDRTARTLWRKMGPLERQRYDKDGEDEYDSGNDDLIAVPFKKRRADGDGATATPPPASSVTAASKAVTAALKKPVAPAATSIVTNSSDDDTRTRDMPAPADDATEKKIAKQMRWTASNESLAVSATGTGIKNAPVKAWHVRVPAHAEKASSELLDTEKKPTAPRKKAKTTMPVLALRVCRRGGCGMPACDLGGDRGDNYCSETCIMLDSYGQLMGDAGSASATANEGSAVAEGGIDVVGTVGDSMGSAAMDLHAGADVGAGVGVGLDGGVNGTPDA* # PASA_UPDATE: g9037.t1, single gene model update, valid-1, status:[pasa:asmbl_5822,status:3], valid-1 NODE_327_length_26869_cov_41.312 . gene 14942 17223 . - . ID=g9037;Name=g9037.t1 NODE_327_length_26869_cov_41.312 . mRNA 14942 17223 . - . ID=g9037.t1;Parent=g9037;Name=g9037.t1 NODE_327_length_26869_cov_41.312 . five_prime_UTR 16882 17223 . - . ID=g9037.t1.utr5p1;Parent=g9037.t1 NODE_327_length_26869_cov_41.312 . exon 16450 17223 . - . ID=g9037.t1.exon1;Parent=g9037.t1 NODE_327_length_26869_cov_41.312 . CDS 16450 16881 . - 0 ID=cds.g9037.t1;Parent=g9037.t1 NODE_327_length_26869_cov_41.312 . exon 14942 16334 . - . ID=g9037.t1.exon2;Parent=g9037.t1 NODE_327_length_26869_cov_41.312 . CDS 15327 16334 . - 0 ID=cds.g9037.t1;Parent=g9037.t1 NODE_327_length_26869_cov_41.312 . three_prime_UTR 14942 15326 . - . ID=g9037.t1.utr3p1;Parent=g9037.t1 #PROT g9037.t1 g9037 MAAVGFFDSALFHDVLADVDTTGVDVDVDMMDDVFGLSISSESYDDFKTVKPKPKRPSAKTSMSKAAARSLAARRMEGDVKLDAGSDESSSDSQTVHEKPPYSYAALIALAINGSPDKRLTLNEIYRWIEEHYPFYQEHESSWKNSIRHNLSLKKCFVKVPRPNEDKGKGAWWTIDPTFWESVDKIGRKRTVSEAGVVLGGNSPKKQRTAHRNSTGSMPATRPVSLTGSQAQSPIPHAPSSESAAEPLAVVPAQLRQQITLESMVTVVPASAAIVPGLTMSSSPSKKPALVRSRSVSVEESTSKPGAIKRRKSTTTPVLIGSATLHAHSPTKIASPKKPSVAKPITSDESARQSFISLCDPSLAKIDIDRFGIEGLLPLTASHYGPTLTALSANAMDLLHADLALDLEHCSSEESLPSFEGIAWDAAFGQSSFPTVTLGGDMASVSPLPPSNATSCLLASELDGDLFGDVEFNTAIEAL* # ORIGINAL: g9040.t1 original gene structure, not modified by PASA NODE_327_length_26869_cov_41.312 AUGUSTUS gene 23020 26661 . + . ID=g9040;Name=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS mRNA 23020 26661 . + . ID=g9040.t1;Parent=g9040;Name=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 23020 23070 . + . ID=g9040.t1.exon1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 23020 23070 . + 0 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 23197 23342 . + . ID=g9040.t1.exon2;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 23197 23342 . + 0 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 23752 24495 . + . ID=g9040.t1.exon3;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 23752 24495 . + 1 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 24840 24962 . + . ID=g9040.t1.exon4;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 24840 24962 . + 1 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 25118 25700 . + . ID=g9040.t1.exon5;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 25118 25700 . + 1 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 25794 25874 . + . ID=g9040.t1.exon6;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 25794 25874 . + 0 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 26087 26139 . + . ID=g9040.t1.exon7;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 26087 26139 . + 0 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 26345 26495 . + . ID=g9040.t1.exon8;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 26345 26495 . + 1 ID=cds.g9040.t1;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS exon 26659 26661 . + . ID=g9040.t1.exon9;Parent=g9040.t1 NODE_327_length_26869_cov_41.312 AUGUSTUS CDS 26659 26661 . + 0 ID=cds.g9040.t1;Parent=g9040.t1 #PROT g9040.t1 g9040 MLNDMIKYDVQKEQWCKVSTSGSPPSPRYHHSAVIHNDSMLVFGGYSGDLYSNSNLENRNDIFEYRFDTSQWFEWTTVGQSRPVARSAHGAVVWGGRLWMFAGYDGKARLNDMWTLSLSEPHEWTEVKQLGQRPPTCCNFPVAVARDRMYVFSGHSGANTTNDLFCFHFRTCRWERVLMRHLMHGGAPPPPRRFGHTMVFYDRHLYVFGGAADNTLPNELYVFDLDSQTWHVAEPKSDGQVPSGRCFHSAAVVKDALYVFGGTVDFSQNAKSADLYRFQFSAFPKCTLEEDFGAFLARGELCDLVIVVGPERKCFETHAAIVAARSPYLRELITRARQDQRSSYRQMIEDTHGSCEDPSANPFSRPARVEIELPQTQAEAFQTALYFMYADRMPEAEYQPEMTFDSLHSIIAVYELSLQLGLQRLERLCERCILASVDRRNILAVLRVVSSLGLAALKSFCLSYVVQEAHFRDVINSPEFETLDQQLIVEIVRRQQEPNKREHPLTAVDSPAGSLATDMAKLLADSTDAGIDFCDVALNLNGVTKMAHRAILAARSQYFAAMFRSGMKEAETSTVNIMIGDVLPTTQAFASLLRYIYHGSVDMSAEDSMYLFSSPHFYGFTNDRLQVFCRHNLEENVSGDNVLQ* # ORIGINAL: g11810.t1 original gene structure, not modified by PASA NODE_2536_length_5981_cov_53.7594 AUGUSTUS gene 4956 5363 . + . ID=g11810;Name=g11810.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS mRNA 4956 5363 . + . ID=g11810.t1;Parent=g11810;Name=g11810.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS exon 4956 5363 . + . ID=g11810.t1.exon1;Parent=g11810.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS CDS 4956 5363 . + 0 ID=cds.g11810.t1;Parent=g11810.t1 #PROT g11810.t1 g11810 MSYTRLSNDPCEFMSKNDMSTQQHEHVMFLPKYMSTTTCQFDKHGTVMRAPTTITSQLADRQNLVDLESSLTGRRSHVNTMSACHDPHMEFERLKRHAPIKAPATICSPLASVGSCPVVPFPVFVNPKAFGGSRC* # ORIGINAL: g11811.t1 original gene structure, not modified by PASA NODE_2536_length_5981_cov_53.7594 AUGUSTUS gene 5621 5959 . - . ID=g11811;Name=g11811.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS mRNA 5621 5959 . - . ID=g11811.t1;Parent=g11811;Name=g11811.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS exon 5621 5959 . - . ID=g11811.t1.exon1;Parent=g11811.t1 NODE_2536_length_5981_cov_53.7594 AUGUSTUS CDS 5621 5959 . - 0 ID=cds.g11811.t1;Parent=g11811.t1 #PROT g11811.t1 g11811 MSKVPSEFQGETVFHCPLEDTVDQDVAQYFAAAVEFIETNISAGRNVIIHCSAGRSRSVTIALAYLMHKGHKFESAMEHILQARSIADPNVGFVQQLQGFEARTAALPRHNV* # PASA_UPDATE: g1581.t1, single gene model update, valid-1, status:[pasa:asmbl_6041,status:12],[pasa:asmbl_6042,status:12], valid-1 NODE_3419_length_3509_cov_75.0341 . gene 1317 3304 . - . ID=g1581;Name=g1581.t1 NODE_3419_length_3509_cov_75.0341 . mRNA 1317 3304 . - . ID=g1581.t1;Parent=g1581;Name=g1581.t1 NODE_3419_length_3509_cov_75.0341 . five_prime_UTR 3254 3304 . - . ID=g1581.t1.utr5p1;Parent=g1581.t1 NODE_3419_length_3509_cov_75.0341 . exon 3193 3304 . - . ID=g1581.t1.exon1;Parent=g1581.t1 NODE_3419_length_3509_cov_75.0341 . CDS 3193 3253 . - 0 ID=cds.g1581.t1;Parent=g1581.t1 NODE_3419_length_3509_cov_75.0341 . exon 1317 2310 . - . ID=g1581.t1.exon2;Parent=g1581.t1 NODE_3419_length_3509_cov_75.0341 . CDS 2006 2310 . - 2 ID=cds.g1581.t1;Parent=g1581.t1 NODE_3419_length_3509_cov_75.0341 . three_prime_UTR 1317 2005 . - . ID=g1581.t1.utr3p1;Parent=g1581.t1 #PROT g1581.t1 g1581 MAAIVKRLAGLGGSLARVGQQLNRVDTKPAKEFLKKARVELTPPSVSQLGEVQASFAKVVNSARTGAFLNLTVKDAARNALVAAEIAGWFFVGEIIGRGSLIGYKINPKDLAVDGHAAEHH* # ORIGINAL: g1580.t1 original gene structure, not modified by PASA NODE_3419_length_3509_cov_75.0341 AUGUSTUS gene 434 988 . + . ID=g1580;Name=g1580.t1 NODE_3419_length_3509_cov_75.0341 AUGUSTUS mRNA 434 988 . + . ID=g1580.t1;Parent=g1580;Name=g1580.t1 NODE_3419_length_3509_cov_75.0341 AUGUSTUS exon 434 552 . + . ID=g1580.t1.exon1;Parent=g1580.t1 NODE_3419_length_3509_cov_75.0341 AUGUSTUS CDS 434 552 . + 0 ID=cds.g1580.t1;Parent=g1580.t1 NODE_3419_length_3509_cov_75.0341 AUGUSTUS exon 910 988 . + . ID=g1580.t1.exon2;Parent=g1580.t1 NODE_3419_length_3509_cov_75.0341 AUGUSTUS CDS 910 988 . + 1 ID=cds.g1580.t1;Parent=g1580.t1 #PROT g1580.t1 g1580 EPGFLARFWASLALTPEEKQRRHEAKVADAESRIQAIRQHRYMRSLPQTHVPMVVTESWNNDLVR* # PASA_UPDATE: g214.t1, single gene model update, valid-1, status:[pasa:asmbl_7098,status:12], valid-1 NODE_4206_length_2029_cov_40.652 . gene 43 608 . - . ID=g214;Name=g214.t1 NODE_4206_length_2029_cov_40.652 . mRNA 43 608 . - . ID=g214.t1;Parent=g214;Name=g214.t1 NODE_4206_length_2029_cov_40.652 . five_prime_UTR 396 608 . - . ID=g214.t1.utr5p1;Parent=g214.t1 NODE_4206_length_2029_cov_40.652 . exon 43 608 . - . ID=g214.t1.exon1;Parent=g214.t1 NODE_4206_length_2029_cov_40.652 . CDS 43 395 . - 0 ID=cds.g214.t1;Parent=g214.t1;3_prime_partial=true #PROT g214.t1 g214 MRNFVASSRRFRGIPFLLHVLIVACLVCNAVCQNTTVRVLYTGELRGHDQETLISGVYYGGLARASTWMANATASADTATFVVPIDVGSWMGTNVLDKMDEGKTTASILKTMGIQAR # PASA_UPDATE: g10480.t1, single gene model update, valid-1, status:[pasa:asmbl_3603,status:12],[pasa:asmbl_3604,status:12], valid-1 NODE_2138_length_7544_cov_36.8296 . gene 213 5581 . - . ID=g10480;Name=g10480.t1 NODE_2138_length_7544_cov_36.8296 . mRNA 213 5581 . - . ID=g10480.t1;Parent=g10480;Name=g10480.t1 NODE_2138_length_7544_cov_36.8296 . five_prime_UTR 5393 5581 . - . ID=g10480.t1.utr5p1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 5375 5581 . - . ID=g10480.t1.exon1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 5375 5392 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 4990 5127 . - . ID=g10480.t1.exon2;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 4990 5127 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 4687 4787 . - . ID=g10480.t1.exon3;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 4687 4787 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 4355 4444 . - . ID=g10480.t1.exon4;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 4355 4444 . - 1 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 3665 3782 . - . ID=g10480.t1.exon5;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 3665 3782 . - 1 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 3241 3396 . - . ID=g10480.t1.exon6;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 3241 3396 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 2820 2923 . - . ID=g10480.t1.exon7;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 2820 2923 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 2408 2512 . - . ID=g10480.t1.exon8;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 2408 2512 . - 1 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 2077 2214 . - . ID=g10480.t1.exon9;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 2077 2214 . - 1 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 1654 1735 . - . ID=g10480.t1.exon10;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 1654 1735 . - 1 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 1336 1477 . - . ID=g10480.t1.exon11;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 1336 1477 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 812 1017 . - . ID=g10480.t1.exon12;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 812 1017 . - 2 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 535 714 . - . ID=g10480.t1.exon13;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 535 714 . - 0 ID=cds.g10480.t1;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . exon 213 316 . - . ID=g10480.t1.exon14;Parent=g10480.t1 NODE_2138_length_7544_cov_36.8296 . CDS 213 316 . - 0 ID=cds.g10480.t1;Parent=g10480.t1;3_prime_partial=true #PROT g10480.t1 g10480 MASVDEVKFIIEQLNTPPFSRKFTLVTFDELGRNGLQLLQLLNDVFAEISPLQKVNLRDELPEQTAFRMLEFLRVLKYQPKRDPGGATFRQDLVQGEREAIYPLLLWILQRPDDLRKRAYLARFLVQIEVPDEFLADDSIAEVNEQYLEMLSQFKTLHKTVEGFRGTGLSPAEIKRDISNMEEEREQLRRRVEKAQKKIEAVRGHEKYLDAARDFRTEKERQQELVARMRDEKNRLLHAEQRHSQAMQTLKEMRTASVGGNPEALLKRVQEENRMNKMFVTEKLPKAIDEKRKMCVEMSKILSEPSVSDADLRGLEDQIHELNAEINSYVEKRMAKGDPADDKLALFRQQASIIERKKNSTAESMKDAMAELATLEKEIERKREESKGGEGQTKMLKGDDFKRYVAQLRAKSTTYKKKKAEIAELRAELVVLGRTEEVLRSRDENVKDLLSQLEAKKGVSGYQHTQETIEAVSSAKEDIDEQKGRTLTEISDMVKQIMQAIADKKSKLSPVIRELRSKRQQCQELEVVYEEKKGTYERKLADLDTSKGRVEQEVGQLRSD # ORIGINAL: g10481.t1 original gene structure, not modified by PASA NODE_2138_length_7544_cov_36.8296 AUGUSTUS gene 6098 7426 . + . ID=g10481;Name=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS mRNA 6098 7426 . + . ID=g10481.t1;Parent=g10481;Name=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS exon 6098 6245 . + . ID=g10481.t1.exon1;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS CDS 6098 6245 . + 0 ID=cds.g10481.t1;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS exon 6379 6434 . + . ID=g10481.t1.exon2;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS CDS 6379 6434 . + 2 ID=cds.g10481.t1;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS exon 6615 6714 . + . ID=g10481.t1.exon3;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS CDS 6615 6714 . + 0 ID=cds.g10481.t1;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS exon 6937 7062 . + . ID=g10481.t1.exon4;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS CDS 6937 7062 . + 2 ID=cds.g10481.t1;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS exon 7263 7426 . + . ID=g10481.t1.exon5;Parent=g10481.t1 NODE_2138_length_7544_cov_36.8296 AUGUSTUS CDS 7263 7426 . + 2 ID=cds.g10481.t1;Parent=g10481.t1 #PROT g10481.t1 g10481 MEHTLHRFPLVTETALFGLPLIYGSYRLAEFFPESWFGIAIALLGLICFAFASEGRNVGRAVGLFRANARPGLNVGATLVPFALIGTIIARGSTGGRDITIELLHYYLLLAIAMSAVGMTRHVRFIQALISFLLIASIAGLPVAPSHMVVGASVGLFVVTYELVVRLSGASFTAGEGLLLSSLVALLATDAVFATGTK # ORIGINAL: g36.t1 original gene structure, not modified by PASA NODE_3038_length_4465_cov_102.379 AUGUSTUS gene 584 1312 . + . ID=g36;Name=g36.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS mRNA 584 1312 . + . ID=g36.t1;Parent=g36;Name=g36.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS exon 584 1312 . + . ID=g36.t1.exon1;Parent=g36.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS CDS 584 1312 . + 0 ID=cds.g36.t1;Parent=g36.t1 #PROT g36.t1 g36 MRLFDMCESSVVAVVVTTLTGYHGFAGLTSHIDALDQANMVGTAYMRLLDMSEPEFEHWTICVQRLGGIVRHNRHMRDSLYLNTNACSDELLKVTFGHVEAVKPFLSETCVATVIRDIVHALCPACCRPDSDGTLHPCNAKWLDTFDLLFIICRGVLAIARIDATCIWVRRDVAFTHAALDSIYDATRFLLPISSVSVYLESALRILCILHDASGQSRFTAHMFAEWLNYAKTKKMRTSARD* # ORIGINAL: g37.t1 original gene structure, not modified by PASA NODE_3038_length_4465_cov_102.379 AUGUSTUS gene 2167 2502 . + . ID=g37;Name=g37.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS mRNA 2167 2502 . + . ID=g37.t1;Parent=g37;Name=g37.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS exon 2167 2502 . + . ID=g37.t1.exon1;Parent=g37.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS CDS 2167 2502 . + 0 ID=cds.g37.t1;Parent=g37.t1 #PROT g37.t1 g37 MTEHSAAAEIDTLKQAMAAAANKLIRELAACEMLLMNEERAKRGKGELEDHAYPSRLIHALDRGNRVLSALHPRTMEGYCYQFFTGALADTNIFIANLSAAYVNINWLRMP* # ORIGINAL: g38.t1 original gene structure, not modified by PASA NODE_3038_length_4465_cov_102.379 AUGUSTUS gene 3300 4268 . - . ID=g38;Name=g38.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS mRNA 3300 4268 . - . ID=g38.t1;Parent=g38;Name=g38.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS exon 3300 4268 . - . ID=g38.t1.exon1;Parent=g38.t1 NODE_3038_length_4465_cov_102.379 AUGUSTUS CDS 3300 4268 . - 0 ID=cds.g38.t1;Parent=g38.t1 #PROT g38.t1 g38 MTSLPVPLAPYAASLIHTAHETANNLEKALYKATKELVGSKPGAQSLEGYLEFGYQAHGAKLLATLRNNNIPPAALSRHHTVIEDANNLITNINLGIEQMTWYKKCAKTVASTHDNERPCKRARTDASRAGPASPATAASSGARASTAATKVATSPAIPPQAAMTEAQRKRLHIDAFVTLWKAAIGSWENPLASLHPRRIHVDAVRRALIIQRLEEAIQDIEHRRLSKDIDDTLHTAYVFNKGIFDWERRAIGRFPTIGTKPGGPPIAADDRPSTIMSTPMPPEACPYQASTTAALLERMTRLDRTAADAITQTGTLTTDPT* # ORIGINAL: g11.t1 original gene structure, not modified by PASA NODE_2755_length_5209_cov_96.828 AUGUSTUS gene 3374 3856 . + . ID=g11;Name=g11.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS mRNA 3374 3856 . + . ID=g11.t1;Parent=g11;Name=g11.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS exon 3374 3856 . + . ID=g11.t1.exon1;Parent=g11.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS CDS 3374 3856 . + 0 ID=cds.g11.t1;Parent=g11.t1 #PROT g11.t1 g11 MDAQYMRAAGYFFYDISLSDLFDEYQEDFESAKELMLLAVKEGDAHSTMYYGECLCRGLGLPQNMEAGLKVLEGMAVGEGRFEPAAHRLDRIYRIDPDLRKNPQLWFACLPRAKENLVRGIKRNCRICRSKLLTWEAPDSDDRCPRVVLAGEVVTNWHSL* # ORIGINAL: g10.t1 original gene structure, not modified by PASA NODE_2755_length_5209_cov_96.828 AUGUSTUS gene 2603 3349 . + . ID=g10;Name=g10.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS mRNA 2603 3349 . + . ID=g10.t1;Parent=g10;Name=g10.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS exon 2603 3349 . + . ID=g10.t1.exon1;Parent=g10.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS CDS 2603 3349 . + 0 ID=cds.g10.t1;Parent=g10.t1 #PROT g10.t1 g10 MEQKRARTTDYEADYVAGDWESILAGKDNPAAMFHVGLYYDSVKHDFVLARDAFQAAMDSGDTCACIVLAAYNRFYMAMKEAPVKAIDLGDVIKLALRCDADGRAWFLKHVARGDLAAAVYLWLALDLPGATPCDVCAEPHLNALPLETHPVGAFIRGLSLLHVADTKEQGMSLLKKAGEAGVLLAIVEYFDALFSPIVNDPAVIAYAESLRPWVPVFETYPFPVMHYWMAKSRLELISLLDRTAGDR* # ORIGINAL: g12.t1 original gene structure, not modified by PASA NODE_2755_length_5209_cov_96.828 AUGUSTUS gene 4528 5040 . - . ID=g12;Name=g12.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS mRNA 4528 5040 . - . ID=g12.t1;Parent=g12;Name=g12.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS exon 4528 5040 . - . ID=g12.t1.exon1;Parent=g12.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS CDS 4528 5040 . - 0 ID=cds.g12.t1;Parent=g12.t1 #PROT g12.t1 g12 MASYIPVGLAIALPVAGGVAGSIVTRNEIKTWYTGLKKPWFTPPNWVFGPMWTSLYTCMGYASYLVWRDGGGLSLNPISPAVVPLSLYAAQLGLNFAWSPLFFGKHKIRSAFVDIVAMWAGIAACIVTFRPINETASNLMIPYLGWVTLATALNHQIIALNPNEESSKRD* # ORIGINAL: g9.t1 original gene structure, not modified by PASA NODE_2755_length_5209_cov_96.828 AUGUSTUS gene 378 1862 . - . ID=g9;Name=g9.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS mRNA 378 1862 . - . ID=g9.t1;Parent=g9;Name=g9.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS exon 378 1862 . - . ID=g9.t1.exon1;Parent=g9.t1 NODE_2755_length_5209_cov_96.828 AUGUSTUS CDS 378 1862 . - 0 ID=cds.g9.t1;Parent=g9.t1 #PROT g9.t1 g9 MFAARVPILAASTVVVFLALCVAGIHGLPLASDLPDNLRSIGNLDTTAAGAFGRGLVAFMYGLPIVHMWQSREKYVAQSGGQLNVFIHQRQLTNASGPAIFVSPNADTLYSQAWIDLHTGPVRLSVPATDTADRYYVLELLDFYTNNFADVGTRATGTAAGEYLLTANNTANEQWLAVNRDALDSASVTIIACPTADVWIVGRTLVNLNDPTDLETVWKFQDKLLITPSDSANRSWRKPDALFTADPTPPKGLAFFELVGQYIKADAPPASDALFFAFFGAIGLTVSGGFNASVLTPEDSLALSLAGTAGYSLIHSADLLSGHFTKSNNGWRYIHHVGTYGINFLVRAVVSDKYLAANIPEEAMYFTRDHDSENRPLSGAENARYSVKFPGGIRSAIPCKAFWSITMYNATNYFLVDNEINRYAIGDRTAGLYEDPADGSLTVYIQADVPTDAHELSNWLPAPREGFYMLLRAYVPSSDVVSGVFQLPELVKVA* # ORIGINAL: g4641.t1 original gene structure, not modified by PASA NODE_3085_length_4363_cov_44.6931 AUGUSTUS gene 1571 3092 . + . ID=g4641;Name=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS mRNA 1571 3092 . + . ID=g4641.t1;Parent=g4641;Name=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 1571 1697 . + . ID=g4641.t1.exon1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 1571 1697 . + 0 ID=cds.g4641.t1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 1806 1880 . + . ID=g4641.t1.exon2;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 1806 1880 . + 2 ID=cds.g4641.t1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 2024 2240 . + . ID=g4641.t1.exon3;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 2024 2240 . + 2 ID=cds.g4641.t1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 2386 2530 . + . ID=g4641.t1.exon4;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 2386 2530 . + 1 ID=cds.g4641.t1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 2668 2843 . + . ID=g4641.t1.exon5;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 2668 2843 . + 0 ID=cds.g4641.t1;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS exon 3014 3092 . + . ID=g4641.t1.exon6;Parent=g4641.t1 NODE_3085_length_4363_cov_44.6931 AUGUSTUS CDS 3014 3092 . + 1 ID=cds.g4641.t1;Parent=g4641.t1 #PROT g4641.t1 g4641 MSDSEDIATSSKVHEDVFTDETAELADNVHDTIAEAVKAPLNGEYKAVEKKAEKAVEHAKCDCSSTKIAHDLVYWRDLKKSVAVFVGGLVGIYLFLHSDYTLLTLVSYLALFTLLGNFVYVNAVTMLQTFQGHPVVNPNKARIEYPVSNLLSEDAVGQAAKTVAAHTTHVAKAAQSLLLVENNVVSIKFGIALWALSVVGRVFSGASLVTLAFVGAFSVPKVYELYHNEIDAHFAQGKKVVVDLLHTVGAKVPFLQQHFGAAHSTAVHKKKE* # PASA_UPDATE: g9089.t1, single gene model update, valid-1, status:[pasa:asmbl_838,status:3], valid-1 NODE_1217_length_12952_cov_38.5452 . gene 7166 10554 . + . ID=g9089;Name=g9089.t1 NODE_1217_length_12952_cov_38.5452 . mRNA 7166 10554 . + . ID=g9089.t1;Parent=g9089;Name=g9089.t1 NODE_1217_length_12952_cov_38.5452 . five_prime_UTR 7166 7247 . + . ID=g9089.t1.utr5p1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 7166 7634 . + . ID=g9089.t1.exon1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 7248 7634 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 7766 7910 . + . ID=g9089.t1.exon2;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 7766 7910 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 8019 8092 . + . ID=g9089.t1.exon3;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 8019 8092 . + 2 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 8261 8454 . + . ID=g9089.t1.exon4;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 8261 8454 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 8622 8706 . + . ID=g9089.t1.exon5;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 8622 8706 . + 1 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 8882 8946 . + . ID=g9089.t1.exon6;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 8882 8946 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 9117 9219 . + . ID=g9089.t1.exon7;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 9117 9219 . + 1 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 9440 9544 . + . ID=g9089.t1.exon8;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 9440 9544 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 9697 9846 . + . ID=g9089.t1.exon9;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 9697 9846 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 9937 9976 . + . ID=g9089.t1.exon10;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 9937 9976 . + 0 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . exon 10120 10554 . + . ID=g9089.t1.exon11;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . CDS 10120 10391 . + 2 ID=cds.g9089.t1;Parent=g9089.t1 NODE_1217_length_12952_cov_38.5452 . three_prime_UTR 10392 10554 . + . ID=g9089.t1.utr3p1;Parent=g9089.t1 #PROT g9089.t1 g9089 MTVAVLSAAYVSLAASFVGICILSTVYVRYYQHKRGREKFPTLVTVCAMAAALVSVAIVPADIYVASSFKDSAGNFHGWATPDVVHSYETTVEKAYYGVYGTILGFIFFLIPFTYFYCDENDFGVTTRERVVAALKFTAVSLFIWVIFFIVGLFVKPNDVTNTGDDFQYIKDVLSANKGENALTFCIGVLTLIGFLVWISYTAYGLFALPMFLIKGRRGRDNSEADEAAAELRATRDQQRTIRARQSGMELNSRERKTLEDLQARERVLARQEEAWLASSQGKWAKCLRVIRPFQFLFGFALFALSLLLFVSLLLTCVDRAMHSAGAKSGYMIDRTRIVNPLDKIMLLSQKAFPLDYCFFVGIVAYIVLCTVSGIKNLGVRCLCVKLFAVKRKRTPPQALLFAIMVLMLAVLALSPMLMTILPQYTTFGNEKYLASGNATTGCTTTAPAGACISTRISGLTSRFFYRMWFFGAAYFYLSWTFVAACVFGCVVSLFRKPPPPSGAGEYDEADDYSSEDDAIVRRNRSRKPSAYQPLVMTE* # PASA_UPDATE: g9086.t1, single gene model update, valid-1, status:[pasa:asmbl_836,status:12], valid-1 NODE_1217_length_12952_cov_38.5452 . gene 218 1621 . - . ID=g9086;Name=g9086.t1 NODE_1217_length_12952_cov_38.5452 . mRNA 218 1621 . - . ID=g9086.t1;Parent=g9086;Name=g9086.t1 NODE_1217_length_12952_cov_38.5452 . exon 1472 1621 . - . ID=g9086.t1.exon1;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . CDS 1472 1621 . - 0 ID=cds.g9086.t1;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . exon 1001 1231 . - . ID=g9086.t1.exon2;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . CDS 1001 1231 . - 0 ID=cds.g9086.t1;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . exon 780 876 . - . ID=g9086.t1.exon3;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . CDS 780 876 . - 0 ID=cds.g9086.t1;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . exon 508 565 . - . ID=g9086.t1.exon4;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . CDS 508 565 . - 2 ID=cds.g9086.t1;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . exon 218 314 . - . ID=g9086.t1.exon5;Parent=g9086.t1 NODE_1217_length_12952_cov_38.5452 . CDS 218 314 . - 1 ID=cds.g9086.t1;Parent=g9086.t1 #PROT g9086.t1 g9086 MAMMPQQAPLVVSYTDGAVVELLLIGLWCVLAVAIPYLNLVAVDVHIIGPTALAKIPNESNKRPGQSASGDRHLKMDDFDGWFADKVKALKLDDETIVEYIDGIVRMDESTDEEKKEAITEFLSAAGSEDYTSFADDVVDKWNQIHSKKEAETKAKAQQARVAAIAAAIVADTEEVPSKPVDPLAHLSNAERRQREAILAQYAYDLDYEV* # ORIGINAL: g9090.t1 original gene structure, not modified by PASA NODE_1217_length_12952_cov_38.5452 AUGUSTUS gene 11454 12856 . + . ID=g9090;Name=g9090.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS mRNA 11454 12856 . + . ID=g9090.t1;Parent=g9090;Name=g9090.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS exon 11454 11860 . + . ID=g9090.t1.exon1;Parent=g9090.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS CDS 11454 11860 . + 0 ID=cds.g9090.t1;Parent=g9090.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS exon 12117 12856 . + . ID=g9090.t1.exon2;Parent=g9090.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS CDS 12117 12856 . + 1 ID=cds.g9090.t1;Parent=g9090.t1 #PROT g9090.t1 g9090 MTLPIPKRGVEAITSTPDCTTRKTNIRAVAGRRNKGPTWLRGVTLVITVTSLVFTAHAVDTVSATERHTSVSGGSSFDSCDAGGSTAAVTEAGRVIANAHPAARPAAVASRDGRKLGGSQPQPIGVWWRLEGMIGWGVYGANLVSQLEKRHNHTLELVLMVEPMTGGDGPVNAGLARQIWERSRTTHVEALSECLGRREQRLRKQSRHDVTHVMRCEVGYPVLHAFGNYLAPDGGDDEWPPVWGTRNALVVFFERQTLPPSVIARLSMYDVVITGSSWNAEALRAAGLPRVARVWQGVDGGVFDHATVLQRIARRQGSLSGVVSDGMREVAHQNTNNNNNNNSNNNNNHKIADNRVSPGVSRFKPEGVLTLPSVRKRCRALK # ORIGINAL: g9087.t1 original gene structure, not modified by PASA NODE_1217_length_12952_cov_38.5452 AUGUSTUS gene 2059 3483 . + . ID=g9087;Name=g9087.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS mRNA 2059 3483 . + . ID=g9087.t1;Parent=g9087;Name=g9087.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS exon 2059 2171 . + . ID=g9087.t1.exon1;Parent=g9087.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS CDS 2059 2171 . + 0 ID=cds.g9087.t1;Parent=g9087.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS exon 2343 3483 . + . ID=g9087.t1.exon2;Parent=g9087.t1 NODE_1217_length_12952_cov_38.5452 AUGUSTUS CDS 2343 3483 . + 1 ID=cds.g9087.t1;Parent=g9087.t1 #PROT g9087.t1 g9087 MQDDIYSRFCELPEKGIPFAVISTEGERDAVEQRLTDRVGFPITCVLPDTRDLWSAIERISPSHALANTVFDPSEAQLLWRPARFLETVVPYIERILLLGEQPIDDPERQVTQGALVRALAQMCGACFDGSTPCSGHEREDKVPAGSNCSEMHVNTAHPADCLPASLSFLDLACGSGRDSAWLGSRHARSSASPPMSSSQPASHINHTCTDTASHINHNCTDTAGPTQRDLASPPLWRGVAVDCDARAITRARMLFRRLIDNASTDTDGAADAVAYGVADLQGDFMSSVCRPVAQLALSARIAVESGGGGGGGVDGLNDPTFHLVLCVRYLHRPLLARLARLVRPGGFLLYQTFLEGATHPRDPAHLLRRGELRALFTPLGMRVLVDCEGRIADGRPMAYFLAQMQPSLMKPGDPPA* # PASA_UPDATE: g9088.t1, single gene model update, valid-1, status:[pasa:asmbl_837,status:12], valid-1 NODE_1217_length_12952_cov_38.5452 . gene 3901 6662 . - . ID=g9088;Name=g9088.t1 NODE_1217_length_12952_cov_38.5452 . mRNA 3901 6662 . - . ID=g9088.t1;Parent=g9088;Name=g9088.t1 NODE_1217_length_12952_cov_38.5452 . five_prime_UTR 6640 6662 . - . ID=g9088.t1.utr5p1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 6517 6662 . - . ID=g9088.t1.exon1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 6517 6639 . - 0 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 6175 6327 . - . ID=g9088.t1.exon2;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 6175 6327 . - 0 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 5781 5946 . - . ID=g9088.t1.exon3;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 5781 5946 . - 0 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 5499 5597 . - . ID=g9088.t1.exon4;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 5499 5597 . - 2 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 5125 5231 . - . ID=g9088.t1.exon5;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 5125 5231 . - 2 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 4765 4942 . - . ID=g9088.t1.exon6;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 4765 4942 . - 0 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 4380 4549 . - . ID=g9088.t1.exon7;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 4380 4549 . - 2 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . exon 3901 4139 . - . ID=g9088.t1.exon8;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . CDS 4047 4139 . - 0 ID=cds.g9088.t1;Parent=g9088.t1 NODE_1217_length_12952_cov_38.5452 . three_prime_UTR 3901 4046 . - . ID=g9088.t1.utr3p1;Parent=g9088.t1 #PROT g9088.t1 g9088 MGISVGCSSCQSRQSAACAARFVKMLASRFSPAFRATSARQLLRSYSTGGSNVLLYVDHNNATVSPATFNAVTAAAKLGKITALVAGNKCDAVVKEVGKIAGVSRVIYADSPAFDGFVPEALAPVILAAHKQFNFTHITSPATAVGKNVLPRVAAKLDVGAISDIIGIKDNDTFVRTIYAGNAIATVKSLDAVKVITIRNTAFEAAAATGGNATAEAAPAADFTQDKSKFHGQELSKSDRPDLTSARIVVSGGRGLKSGENFKILYDLADKLGAAVGASRAAVDAGYVPNDMQIGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADLGLVADLFKVVPEMTNLVK* # PASA_UPDATE: g5647.t1, single gene model update, valid-1, status:[pasa:asmbl_9690,status:12],[pasa:asmbl_9691,status:12], valid-1 NODE_853_length_16739_cov_46.7045 . gene 3519 10124 . - . ID=g5647;Name=g5647.t1 NODE_853_length_16739_cov_46.7045 . mRNA 3519 10124 . - . ID=g5647.t1;Parent=g5647;Name=g5647.t1 NODE_853_length_16739_cov_46.7045 . five_prime_UTR 9882 10124 . - . ID=g5647.t1.utr5p1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 9756 10124 . - . ID=g5647.t1.exon1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 9756 9881 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 9489 9656 . - . ID=g5647.t1.exon2;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 9489 9656 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 9083 9330 . - . ID=g5647.t1.exon3;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 9083 9330 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 8808 8958 . - . ID=g5647.t1.exon4;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 8808 8958 . - 1 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 8373 8507 . - . ID=g5647.t1.exon5;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 8373 8507 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 8167 8233 . - . ID=g5647.t1.exon6;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 8167 8233 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 7778 7906 . - . ID=g5647.t1.exon7;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 7778 7906 . - 2 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 7502 7663 . - . ID=g5647.t1.exon8;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 7502 7663 . - 2 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 7193 7303 . - . ID=g5647.t1.exon9;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 7193 7303 . - 2 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 6958 7004 . - . ID=g5647.t1.exon10;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 6958 7004 . - 2 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 6687 6832 . - . ID=g5647.t1.exon11;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 6687 6832 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 6302 6412 . - . ID=g5647.t1.exon12;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 6302 6412 . - 1 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 6005 6149 . - . ID=g5647.t1.exon13;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 6005 6149 . - 1 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 5076 5831 . - . ID=g5647.t1.exon14;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 5076 5831 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 3781 4929 . - . ID=g5647.t1.exon15;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 3781 4929 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . exon 3519 3638 . - . ID=g5647.t1.exon16;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . CDS 3588 3638 . - 0 ID=cds.g5647.t1;Parent=g5647.t1 NODE_853_length_16739_cov_46.7045 . three_prime_UTR 3519 3587 . - . ID=g5647.t1.utr3p1;Parent=g5647.t1 #PROT g5647.t1 g5647 MAYSLLNEVAEDTPDSPTAPRASNNVLLRSRRKDDTAVSEIEDIHGYRWSIPRAIAFAALGLATGGVLFLVCHWYPRLRMRLLMTRCSLGVAQSVLVVNEDTEWHIETVHVLAVPSASYGATSTEGLTTSVSDSDACTERTPIMGGRNTLGVAREASLRLFEHKHLRYVYSSEQLSFVRCGGIEAGATVGDMLAAGVAGLSEAEYARLQLTYGQNQIDVKVKPYLRMLFEEVLHPFYVFQVFSVTVWLLEPYTVYAICILCLSALSALITLIDMRRNQENLRKMAMYCCDVEVLRAGQYITVSSESLVPGDLMCLPAEAYTLPCDAVLLTGKCIVNESMLTGESVPVSKSALPREDRERPFLDDVDKKSTLYAGTRIIQTRGHGTDRVRALVIRTGFLTSKGGLILSILFPRPSKFKFYSDAFRFVFILAGCAVCGFAYALYTFIEHESPVRTTIIKALDVVTIVVPPALPAAMTIGTIFALSRLKVSQIFCISPPRVNVCGKLKVFCFDKTGTLTEDGLDVWGVVPVDTSRACFETPQHSIAELGPRPFLYALATCHSLTTVHGELVGDPMDVKMFQATTWELDEPGDESLADDSMVPTIVRPRNTRAPLLAADLDARCPHKTAGAPVRQASICEADEVMPYASTVGTATHGATSARAPSSGTAIPNLPAEFGILRQFHFSSQLQRMSVIVSDIASRRIEIFAKGAPETIVALCDPASIPADFSSRLSGYTHEGFRVLAVAGRVAPSAMTWLRAQRAKRDEIESNLTFLGFLVMQNRLKAETTPVIRELNRAAVRCVMVTGDNALTAVSVGRECSLLRTDDHIFLGDLDEEGNVTWTHADEPNLCTLDPSLLIPVPLKDWGATAQQLYDPSQLSYSLAVTGRAFGALHVAGGPAFSRLLVKGAVFARMSPDQKTALIESLQGLGYCVGMCGDGANDCGALKAAHVGISLSEAEASVAAPFTYKRSTIECVPILLREGRCSLVTSFALFKFRALYSLVQFTSVLLLYWVTSTLGDYQFLYEDIVIILTVGVLMGRTRPRGKLGACRPPGSLTSPPVMWSIVGQVVIAVAFQVGVYVWMERQSWFAPLHPVDGEHNIESMENTGAFSISVFQFLWVAVAFSDGRPFRKPLWTNRLYIVALVGLLGLTTYLVFVRDHWTAHVLQLVHLPMRARVTIGCAALINFACALVWDRIIVARILSRGACRRETGTKRYKNAYKQVLRDIAEDRHPLDVRF* # ORIGINAL: g5648.t1 original gene structure, not modified by PASA NODE_853_length_16739_cov_46.7045 AUGUSTUS gene 10709 16510 . + . ID=g5648;Name=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS mRNA 10709 16510 . + . ID=g5648.t1;Parent=g5648;Name=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 10709 11004 . + . ID=g5648.t1.exon1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 10709 11004 . + 0 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 11225 11301 . + . ID=g5648.t1.exon2;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 11225 11301 . + 1 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 11469 11541 . + . ID=g5648.t1.exon3;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 11469 11541 . + 2 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 11882 12432 . + . ID=g5648.t1.exon4;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 11882 12432 . + 1 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 12559 13512 . + . ID=g5648.t1.exon5;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 12559 13512 . + 2 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 13658 13892 . + . ID=g5648.t1.exon6;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 13658 13892 . + 2 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 14179 14425 . + . ID=g5648.t1.exon7;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 14179 14425 . + 1 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 14540 14774 . + . ID=g5648.t1.exon8;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 14540 14774 . + 0 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 15115 15281 . + . ID=g5648.t1.exon9;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 15115 15281 . + 2 ID=cds.g5648.t1;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 15467 16510 . + . ID=g5648.t1.exon10;Parent=g5648.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 15467 16510 . + 0 ID=cds.g5648.t1;Parent=g5648.t1 #PROT g5648.t1 g5648 MGGYESSSEDDFVVVDASDPATYGSGVADRMTPRRRTLLFHINGRRFVVEDGALDPTMTLNEFIRTRTEWKGTKLGCGEGGCGACAVLLSDWSPATGVRHRTANSCLRSIASVDGSVVTTIEGLGSVKRGLHPLQQAIVCSSGTQCGFCTPGMIMAMQGLLVNNPAPSRTQIISHMDGNLCRCTGYRSIVSGFDSFAADPVEAKRDCCVPEIEDTAKKVMPCGNTCADCPTRATCTVSKAGCTMTMKPAATTNRTSTCASASCYGGETCTQASPTAGSFDGAAPDVPEELRAAALDPLSLKYGDTHWHRATSVADVGRIIARHKGASVSIVQAFTSRGVYKNDTSSVYIDVKDIPELTVATLGASSFRFGAAVPIAQFLSLLGAAAETLPVGKGTAFDKMSKNLLRIASHHVRNVGSIAGNMTMCRRKGFESDLVLSLGAQNARVGAAVVSLLTGECSDVKEVSVEQFLSTPDDPNTILLVVYVDVPLSHENDFFDSFKISLRPMNAHALVNAAFRVRTDAARRTIEDATIVIGAVGPRPVFAKATAASLVGKPLARETLVAALAALQQEVHIEPERTKPAYRKSLALSLFYKFFLSMLECVPPRMRSAAVQYTRSPSSGTQAFKCDPSEAPVSLPIHKLEAKIQATGEAEYTDDLPASADDLHGAFVGSTRASARIVSIDASAALSVDGVHGFVCARDIPGKNDCGFIVDTEELFASSIVSYYGQPIGLVVAVTRSIAQAAAKLVTVEYEVKTPIFTIDDAIKAGSFFELNDPLAKVVSGDVDSALKQCDFVCSGEVRYGDQSHFYMEPQATYAVPSRDGSGMVVHASTQDPTGSQNAVATVLGCGAHDVVVSMKRCGGGFGGKLTRNYIVAAAAAVAASKFQRPVRLTLDRNTDMDMVGGRHPWYAKYALGFSKTGQFKAFDGRIYMNGGAFPDLGPDTITIETNLAIDSCYYFENFRVEGMLCKTNLPPNTAMRAPGHFQAALLMETAIEHAASKLGVPPEALREQNFYREPHMRTPIGQLVTHYTLPRLWTQVQASSDFKTRLAAVDTFNAANRWRKRGISCCPVKYGVNWAPAGSLVNVYGRDGTVVVSSGGTEIGQGLNTKVAQAAAYALGCPFASVRIAATATDRVANTFMTGGSVGSGTNAEATRLACEQIARRLDPTRIELRTKLGREPTWQELTAAAHAANVELSSLGRFVPVAVDGNPSLASYFNFGVAVTEVEVDVLTGEPQILRADILYDCGISLNPAVDIGQVEGAFVLVCATVQLMGWCPAERAVMRLCTLCADNWH* # ORIGINAL: g5646.t1 original gene structure, not modified by PASA NODE_853_length_16739_cov_46.7045 AUGUSTUS gene 413 2941 . + . ID=g5646;Name=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS mRNA 413 2941 . + . ID=g5646.t1;Parent=g5646;Name=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 413 715 . + . ID=g5646.t1.exon1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 413 715 . + 0 ID=cds.g5646.t1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 1316 1510 . + . ID=g5646.t1.exon2;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 1316 1510 . + 0 ID=cds.g5646.t1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 1683 1741 . + . ID=g5646.t1.exon3;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 1683 1741 . + 0 ID=cds.g5646.t1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 1918 2066 . + . ID=g5646.t1.exon4;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 1918 2066 . + 1 ID=cds.g5646.t1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 2286 2362 . + . ID=g5646.t1.exon5;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 2286 2362 . + 2 ID=cds.g5646.t1;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS exon 2798 2941 . + . ID=g5646.t1.exon6;Parent=g5646.t1 NODE_853_length_16739_cov_46.7045 AUGUSTUS CDS 2798 2941 . + 0 ID=cds.g5646.t1;Parent=g5646.t1 #PROT g5646.t1 g5646 HHALLLVNLRHLAVQLGKLKVQVAVAAAARSSELVPDALEVGVGDVLQYVVGHAATAHVVAGRVLQVVVHFALIGGQRGHKRCSLVCGMGRPLAAEVAIVVIQSSVETYTWVYVFSVRNMRNSKLKDVREQWKDSRFFLGKNKVMAVALGRTPEDEHAPNLHKLSERVVGNVGLLFTNRSRDEVKEWFTSFSEVDFARSGAKATETVTLEKGPMQFPHSMEPHLRALGLPTQLKNGVVSLLQDFQVCKPGDTLTPDQAKILKLLQMPLAVFQIELEAVWSGGEFESLKEPAESGADEDDEMDAAVEDE* # PASA_UPDATE: g3525.t1, single gene model update, valid-1, status:[pasa:asmbl_2253,status:3], valid-1 NODE_1655_length_9961_cov_39.8841 . gene 5949 8348 . - . ID=g3525;Name=g3525.t1 NODE_1655_length_9961_cov_39.8841 . mRNA 5949 8348 . - . ID=g3525.t1;Parent=g3525;Name=g3525.t1 NODE_1655_length_9961_cov_39.8841 . five_prime_UTR 8209 8348 . - . ID=g3525.t1.utr5p1;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . exon 8086 8348 . - . ID=g3525.t1.exon1;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . CDS 8086 8208 . - 0 ID=cds.g3525.t1;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . exon 6983 7727 . - . ID=g3525.t1.exon2;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . CDS 6983 7727 . - 0 ID=cds.g3525.t1;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . exon 5949 6703 . - . ID=g3525.t1.exon3;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . CDS 5964 6703 . - 2 ID=cds.g3525.t1;Parent=g3525.t1 NODE_1655_length_9961_cov_39.8841 . three_prime_UTR 5949 5963 . - . ID=g3525.t1.utr3p1;Parent=g3525.t1 #PROT g3525.t1 g3525 MPLPVRDFTWDQTDAEVHVTVPLKGVKPAKADVFATDCYVKINYPPYLFEVDLYSEIEEPQSVATFDDGCVKLRLVKQQIVAWPQLHADGEKDVTHKRREASVDAQRACLQEIERRRTDEKNKTDREMVAQQMEVERRDRERIEGLKRDEADAAALDVLRWQSAVDANGNLIEYVPGDGADDVDDDGTDSDDEPSPSDAPRLEKKAAPRMDAQGDKAAGAPVTTPAPVTSSRDEQSVHAVPQSKAIFDDDADADGRGKGRDVTSAVMHAVPRSPAEAARMAAAATAGGASAAPYAQRATAAQPPKPAEKTIPAPRASGTITVSFTPRTFPTAARESRLSEEEEWLNQIKARQSRVHPGVDGGGESAGASTDVPQSSSFESAATSSGGTSTSLPTVASHATQSIDERSAQWLKDKGDAFYRNGNFQSAVEAYTEAIKLDDGLPAIHSNRAACYLRLGSYALCVEDCTSALSLLPDSMPVNRVSRARAYARRYAAHTSLGNLVAAAADCEAAHRLDADNEDILRDLEKLRAELLRMQ* # ORIGINAL: g3526.t1 original gene structure, not modified by PASA NODE_1655_length_9961_cov_39.8841 AUGUSTUS gene 8833 9953 . + . ID=g3526;Name=g3526.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS mRNA 8833 9953 . + . ID=g3526.t1;Parent=g3526;Name=g3526.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 8833 8835 . + . ID=g3526.t1.exon1;Parent=g3526.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 8833 8835 . + 0 ID=cds.g3526.t1;Parent=g3526.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 8997 9953 . + . ID=g3526.t1.exon2;Parent=g3526.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 8997 9953 . + 0 ID=cds.g3526.t1;Parent=g3526.t1 #PROT g3526.t1 g3526 MIARQIFAVLLLVCTAAIAVRAQGVCINSATETCGTCPNPPATPGDRRPDKNTLTMMAYNVKFLFNEHPECTDPQSAYCIANPSSCTKSIGSFGCISPDSWPTLAHIESHLDAVAGVIRELNPDVVSFEEVENCRVLERLNGRLSGLGYKYYLVKGTDSVTLQNVALLTRVDPTIALVRANSGGVQTPVPGSQCGDATSKTESVSKSYYTEITVNNVAIRLMGLHFASEPLTPSPCRQREGQSLSARYFLESKVADNANKEIVVFGWCLAVSSGMLVRLELPACTRSGVCVCSYRVRSPAPLHLLLPGIFCITVHSHSL* # ORIGINAL: g3524.t1 original gene structure, not modified by PASA NODE_1655_length_9961_cov_39.8841 AUGUSTUS gene 367 4636 . + . ID=g3524;Name=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS mRNA 367 4636 . + . ID=g3524.t1;Parent=g3524;Name=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 367 1649 . + . ID=g3524.t1.exon1;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 367 1649 . + 2 ID=cds.g3524.t1;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 1866 2348 . + . ID=g3524.t1.exon2;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 1866 2348 . + 0 ID=cds.g3524.t1;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 2595 2655 . + . ID=g3524.t1.exon3;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 2595 2655 . + 0 ID=cds.g3524.t1;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 3122 3525 . + . ID=g3524.t1.exon4;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 3122 3525 . + 2 ID=cds.g3524.t1;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS exon 3746 4636 . + . ID=g3524.t1.exon5;Parent=g3524.t1 NODE_1655_length_9961_cov_39.8841 AUGUSTUS CDS 3746 4636 . + 0 ID=cds.g3524.t1;Parent=g3524.t1 #PROT g3524.t1 g3524 ELSVFNASFAVCTATSGGAIHATHTWPSTSLPAVTTTSVLRNCSFTNNTAVSNGGAVSTDAPIEVHACLFTSNLAAIGGSIFAQTGDAMKTDAPLPVALLVSSCSFIDSSVSAFGGAVYCVDDRSLNGTNGTEMNGPSFVLETSTFRGCRAGQSGGAVSVRGQSSATSAVIRACVFRNCSAHMFGGGIDVALAAVMSLENTTLDDCKARRGGAVHAVVGETSNSKALPQMALRNATVSACTATLTGGGVHVTMPLAHAGANVTSVALAGCVFLRNVAGDVGGGGALFVDGGARNLVEIADTVFEGNAVPGDYGASVASGPDSLLFVDIGSGSARRSPFARWAVVHPINRAISRALFATDDSHDTLSNKTDTEHGRQVKGTLVNLTEVSPGDRLPAVVMAPVDIFGQVMSVGDGVAVVDAVTTDGPCRLAQSASSTSIGGVVTMDFIAVVGPLSSRCTVEFRIRGSSTLPAAAASTFGAPIVSPRVTGRLSLSLDVTLAAACPPSSHYDPVALSCVHCEAGTFPSMSSNSGNCIACPSEGASCSGGSLVVEVGFAANGDDVLRCPNIPMGFFGTKEACLANGTCADGHSGPLCGTCIDPSEVKDGAACRACPAYWWIPSTALSVAASALALHLSAQPSVVASHVRAVVRFGQFMLLVSPDRAAFGLFSLFSFMPVPGAFIPGRSSAVVFGQGCMLPLDYWGRYTIAGALSIAVVVVCVCAEIMGIVKTRGARRGSLSSAAADAQSYPRVTKALVHFVSFLYIPMAWTLLSFFATHTESGFDSLVVDESIFSSDATHARLRPLAITSCVAWFAGVPVLAVSNLIRTHSLHGAAIGLLWERGSAEWRGVIPTCARALLYEATTLLVRVVLVIAWLFVRPHWPWVQWTTVLIATTALVSSFRSIVGRIISLRPHYTHARDDSPRPGIFGACGLQLPVALVQPGVPMVEYALDCCVVLVGVLGGCAEIASMFDSSELRSLASLEGLVDTGVTSADGNVLAATSFAVAVMALVTSLGLTGSLWAHVHMGGQSSVRSAEFSQGIVN* # PASA_UPDATE: g3781.t1, single gene model update, valid-1, status:[pasa:asmbl_155,status:12], valid-1 NODE_1040_length_14472_cov_40.6962 . gene 7384 11765 . + . ID=g3781;Name=g3781.t1 NODE_1040_length_14472_cov_40.6962 . mRNA 7384 11765 . + . ID=g3781.t1;Parent=g3781;Name=g3781.t1 NODE_1040_length_14472_cov_40.6962 . five_prime_UTR 7384 7677 . + . ID=g3781.t1.utr5p1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 7384 7750 . + . ID=g3781.t1.exon1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 7678 7750 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 8003 8115 . + . ID=g3781.t1.exon2;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 8003 8115 . + 2 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 8282 8390 . + . ID=g3781.t1.exon3;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 8282 8390 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 8695 8867 . + . ID=g3781.t1.exon4;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 8695 8867 . + 2 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 9065 9175 . + . ID=g3781.t1.exon5;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 9065 9175 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 9375 9476 . + . ID=g3781.t1.exon6;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 9375 9476 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 9760 9881 . + . ID=g3781.t1.exon7;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 9760 9881 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 10063 10334 . + . ID=g3781.t1.exon8;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 10063 10334 . + 1 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 10550 10638 . + . ID=g3781.t1.exon9;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 10550 10638 . + 2 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . exon 10918 11765 . + . ID=g3781.t1.exon10;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . CDS 10918 11490 . + 0 ID=cds.g3781.t1;Parent=g3781.t1 NODE_1040_length_14472_cov_40.6962 . three_prime_UTR 11491 11765 . + . ID=g3781.t1.utr3p1;Parent=g3781.t1 #PROT g3781.t1 g3781 MAPTQRTAGDFSNNKDDYELLDPIGKGATACVYAALYKPLSEKVAIKVIDLERYGGNIDEIRKEIQVMSQCNHENVVSYYTSFVVKDQLWLVMRLLGGGSALEIMKHLCPKGFEETVIATILKEVLKALAYFHKNGQIHRDIKAGNILIDMDGDVQVADFGVSSWLVENGERRNVRQTFVGTPCWMAPEVMEQVSGYDYKADIWSFGITAIELASGHAPFAKYPPLKVLYLTLNNPPPTLDLDGEHKRFSKTFKKVVDACLQKDPTKRLTAEELLKHDFFKKAKGREYLRETLISKLPPLTSRSLAAPKGVYRPGGSGRYRKSEDGAWDFEPFSEDDIDEEASDDDDTTGSPASATEARRKISTTSQVSTDGHESEDDDRKNAETVRQMPQGIAPGSAPILPQIAIQSDSAPGSPSVKVAPDVAPTTQTTAATAAAAPIPESSGAAVPAPAPSASPAAAPAMQPPVPLAQAPVATVVSMDSPGTLVQIKLRLRDKNRQLKDIRFGYSYGTDTAAGIAGELVEAGLIDKGDGEVCAQCIEQLLATRTTRSELRFPLSQTKKASIDPATLKGYAQLSIVP* # ORIGINAL: g3779.t1 original gene structure, not modified by PASA NODE_1040_length_14472_cov_40.6962 AUGUSTUS gene 303 4869 . - . ID=g3779;Name=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS mRNA 303 4869 . - . ID=g3779.t1;Parent=g3779;Name=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 4285 4869 . - . ID=g3779.t1.exon1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 4285 4869 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 3898 3981 . - . ID=g3779.t1.exon2;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 3898 3981 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 3277 3684 . - . ID=g3779.t1.exon3;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 3277 3684 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 2483 3148 . - . ID=g3779.t1.exon4;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 2483 3148 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 1598 2216 . - . ID=g3779.t1.exon5;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 1598 2216 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 1257 1356 . - . ID=g3779.t1.exon6;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 1257 1356 . - 2 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 791 1046 . - . ID=g3779.t1.exon7;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 791 1046 . - 1 ID=cds.g3779.t1;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 303 542 . - . ID=g3779.t1.exon8;Parent=g3779.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 303 542 . - 0 ID=cds.g3779.t1;Parent=g3779.t1 #PROT g3779.t1 g3779 MEPPTANQSWRDMYVEAQAQIEHMAGQATKIRQWVEKKVQETEAETRAATDRATTSETKCATLEQQLARAEERIRYLDKRLVDQLRATAEEAESVKEKAAKIREWVDKKVKDLEDENKGLRADIDKLSLALKKCGGDATDTLAPPFQRRSGSTSGAREKKPASDSATGTGTSSSSDDDDDAAIDMQRARSESAKKMMDHLKEQEGKGRGYAPYVEINASFPPAAPKPAQRTPGLTTPTEISMPGETPSRSNSMKSEKLYASPQDFKAEESPPTQRKEIPQYAQPKPKPRRGTVGVVSRSESLPTPKGAPPPPLFPQSRRNTDGALGSHSDSEDKEDAKSGKARRRLKTVSVYTTEQMHKDSLEKSGYLTKRGGKVKTWKRRWFLLRDRTLFYYKSHEDGQRGAEPLGKIPLNGLARIGIADPHAVSKENAFEISTPRRTYYLTAESADDMKAWLGVLQNLLKRTSTMLPEVDEDAPAATGWLRKVKRGISRTRWFVIRGNVLYYYRDPSDHTPLGEIFLQDAAVEDSNPQTDSDYEDDGEEWHCFGVNTRYASYFMIAESKEDKDRWMYHIVCASNSAHHKIGTETERFIANVEDDSDGVMRAIESSAAFAYTDLAIVSPLTSLPTRILEKEAVEMFRSVLLYCSIPIDLNAVDYHVALAQNMTERILSRTELRNECFCQLLKQGPGHRDQNGREAVQCWQLIAVMVGVILPSRHFLPYLKARLRVCGNSRTAGGKYALYCQQIVARAEAAKEKRCNRPSRYEALAVIQSNPFDRPWALMVNVLLPDGRYHMAGFDATTTIAELCATISNELGMRPPSRSGFSLFISEARGTEFCPRDNEIICDLISRWERKLREQQAGLVESGNLPRFSFRRRWYVTGRNRISAGTLESLGPMERMLVFHQSNNEVTHGMFPFNPIVNVRLAALQAQAMHGNIPNTGTAEHEDIVDRCIEAFYPMQLKDNTSASLKAIGGEIAKVWLELAGSGVE # ORIGINAL: g3782.t1 original gene structure, not modified by PASA NODE_1040_length_14472_cov_40.6962 AUGUSTUS gene 12350 14271 . + . ID=g3782;Name=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS mRNA 12350 14271 . + . ID=g3782.t1;Parent=g3782;Name=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 12350 12457 . + . ID=g3782.t1.exon1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 12350 12457 . + 0 ID=cds.g3782.t1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 12591 12693 . + . ID=g3782.t1.exon2;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 12591 12693 . + 0 ID=cds.g3782.t1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 12989 13101 . + . ID=g3782.t1.exon3;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 12989 13101 . + 2 ID=cds.g3782.t1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 13452 13521 . + . ID=g3782.t1.exon4;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 13452 13521 . + 0 ID=cds.g3782.t1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 13818 13919 . + . ID=g3782.t1.exon5;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 13818 13919 . + 2 ID=cds.g3782.t1;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS exon 14075 14271 . + . ID=g3782.t1.exon6;Parent=g3782.t1 NODE_1040_length_14472_cov_40.6962 AUGUSTUS CDS 14075 14271 . + 2 ID=cds.g3782.t1;Parent=g3782.t1 #PROT g3782.t1 g3782 MSKKDFSAMHLKVKCGDDVRLLTIDRTADLAALKDKLRDEFAIEGDFNVKYLDEDGDMITLSKDTEWRATCDSHAGSSHRHLRLEVQNRGPAQYLNSSRGTNPQTDAGSPQTAKRKGVSFGSDGLQSASGTDVTALRESRHLFPADYDDVDVINILRDIREYICGRENLGGQYPVHTKKKSLITREWTSEERASNMHHSVLLLPESASRFCSYYPPHLFHSLRSPFWFAF* # PASA_UPDATE: g3780.t1, single gene model update, valid-1, status:[pasa:asmbl_154,status:3], valid-1 NODE_1040_length_14472_cov_40.6962 . gene 5581 7381 . + . ID=g3780;Name=g3780.t1 NODE_1040_length_14472_cov_40.6962 . mRNA 5581 7381 . + . ID=g3780.t1;Parent=g3780;Name=g3780.t1 NODE_1040_length_14472_cov_40.6962 . five_prime_UTR 5581 5706 . + . ID=g3780.t1.utr5p1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 5581 5709 . + . ID=g3780.t1.exon1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 5707 5709 . + 0 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 5833 5871 . + . ID=g3780.t1.exon2;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 5833 5871 . + 0 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 6026 6135 . + . ID=g3780.t1.exon3;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 6026 6135 . + 0 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 6260 6315 . + . ID=g3780.t1.exon4;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 6260 6315 . + 1 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 6494 6693 . + . ID=g3780.t1.exon5;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 6494 6693 . + 2 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . exon 6878 7381 . + . ID=g3780.t1.exon6;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . CDS 6878 7045 . + 0 ID=cds.g3780.t1;Parent=g3780.t1 NODE_1040_length_14472_cov_40.6962 . three_prime_UTR 7046 7381 . + . ID=g3780.t1.utr3p1;Parent=g3780.t1 #PROT g3780.t1 g3780 MSKGTSIKDAIARWEEKSGEKAAEAKIVRLVGMLPPIEKMDANLSILISCEQLSISTSCIEKISNLQGLKNLKILSLGRNNIKKLEGLEPVADSLEQLWLSYNQIEKLKGIGSLKKLRILYLSNNKVKEWGEFEKIQELPALEELTFNGNPLEEKCSGEGTWRPEVQRRLPKLKKLDGAPIVSDTPEEEEA* # PASA_UPDATE: g9690.t1, single gene model update, valid-1, status:[pasa:asmbl_6778,status:3], valid-1 # PASA_UPDATE: g9690.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6777,status:12], valid-1 NODE_3963_length_2444_cov_36.2617 . gene 8 1632 . + . ID=g9690;Name=g9690.t1 NODE_3963_length_2444_cov_36.2617 . mRNA 8 1632 . + . ID=g9690.t1;Parent=g9690;Name=g9690.t1 NODE_3963_length_2444_cov_36.2617 . five_prime_UTR 8 137 . + . ID=g9690.t1.utr5p1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . five_prime_UTR 332 432 . + . ID=g9690.t1.utr5p2;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . exon 8 137 . + . ID=g9690.t1.exon1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . exon 332 444 . + . ID=g9690.t1.exon2;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . CDS 433 444 . + 0 ID=cds.g9690.t1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . exon 632 779 . + . ID=g9690.t1.exon3;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . CDS 632 779 . + 0 ID=cds.g9690.t1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . exon 994 1632 . + . ID=g9690.t1.exon4;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . CDS 994 1322 . + 2 ID=cds.g9690.t1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . three_prime_UTR 1323 1632 . + . ID=g9690.t1.utr3p1;Parent=g9690.t1 NODE_3963_length_2444_cov_36.2617 . mRNA 8 1632 . + . ID=g9690.t1.1.5b6be70b;Parent=g9690;Name=g9690.t1 NODE_3963_length_2444_cov_36.2617 . five_prime_UTR 8 96 . + . ID=g9690.t1.1.5b6be70b.utr5p1;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . exon 8 137 . + . ID=g9690.t1.1.5b6be70b.exon1;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . CDS 97 137 . + 0 ID=cds.g9690.t1.1.5b6be70b;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . exon 332 444 . + . ID=g9690.t1.1.5b6be70b.exon2;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . CDS 332 444 . + 1 ID=cds.g9690.t1.1.5b6be70b;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . exon 632 730 . + . ID=g9690.t1.1.5b6be70b.exon3;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . CDS 632 730 . + 2 ID=cds.g9690.t1.1.5b6be70b;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . exon 994 1632 . + . ID=g9690.t1.1.5b6be70b.exon4;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . CDS 994 1322 . + 2 ID=cds.g9690.t1.1.5b6be70b;Parent=g9690.t1.1.5b6be70b NODE_3963_length_2444_cov_36.2617 . three_prime_UTR 1323 1632 . + . ID=g9690.t1.1.5b6be70b.utr3p1;Parent=g9690.t1.1.5b6be70b #PROT g9690.t1 g9690 MRRKTASSTSLEACCGWHPSSLSRSRCTTKRRTCGPLVSSISAWNRGHWAVLCGIILSEIASRKIPWTDNDFGGSMPVMLYRLSEGQRPGLGTALLPSGFAEFFDSCTNINPDKRPTFSSVLKMLHDIDTTTMVAPPVADATGQTHFVAAMSEPVTANANWH* #PROT g9690.t1.1.5b6be70b g9690 MVYLHSHDPPIIHRDLKSMNLLLDDSYKVKVADFGLAVLGEDPKKKKDEAEDGELHLTGSLLWMAPELIKQESLHNEETDVWAFGIILSEIASRKIPWTDNDFGGSMPVMLYRLSEGQRPGLGTALLPSGFAEFFDSCTNINPDKRPTFSSVLKMLHDIDTTTMVAPPVADATGQTHFVAAMSEPVTANANWH* # PASA_UPDATE: g9042.t1, single gene model update, valid-1, status:[pasa:asmbl_1900,status:12], valid-1 NODE_1536_length_10644_cov_40.6454 . gene 203 1577 . - . ID=g9042;Name=g9042.t1 NODE_1536_length_10644_cov_40.6454 . mRNA 203 1577 . - . ID=g9042.t1;Parent=g9042;Name=g9042.t1 NODE_1536_length_10644_cov_40.6454 . five_prime_UTR 1492 1577 . - . ID=g9042.t1.utr5p1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 1462 1577 . - . ID=g9042.t1.exon1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 1462 1491 . - 0 ID=cds.g9042.t1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 1332 1368 . - . ID=g9042.t1.exon2;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 1332 1368 . - 0 ID=cds.g9042.t1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 1065 1150 . - . ID=g9042.t1.exon3;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 1065 1150 . - 2 ID=cds.g9042.t1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 861 956 . - . ID=g9042.t1.exon4;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 861 956 . - 0 ID=cds.g9042.t1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 530 653 . - . ID=g9042.t1.exon5;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 530 653 . - 0 ID=cds.g9042.t1;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . exon 203 336 . - . ID=g9042.t1.exon6;Parent=g9042.t1 NODE_1536_length_10644_cov_40.6454 . CDS 203 336 . - 2 ID=cds.g9042.t1;Parent=g9042.t1;3_prime_partial=true #PROT g9042.t1 g9042 MNFEQFRVELVLAPNQIREVVSCLLHTIVFHRAFGTVRPVEVDCDLFEVTYARCDNATVVQLVRDKTEQFAQCFGALGVSKASMTLSFFDKKRRKVVLFGKDESVCWEQWSIVVTLLPSIVDENERSEKSRLLEKEFLAQIDAVIHTVNFKFAHIPPVNNEHEIPFPFE # PASA_UPDATE: g9046.t1, single gene model update, valid-1, status:[pasa:asmbl_1901,status:3], valid-1 NODE_1536_length_10644_cov_40.6454 . gene 5999 8279 . + . ID=g9046;Name=g9046.t1 NODE_1536_length_10644_cov_40.6454 . mRNA 5999 8279 . + . ID=g9046.t1;Parent=g9046;Name=g9046.t1 NODE_1536_length_10644_cov_40.6454 . five_prime_UTR 5999 6080 . + . ID=g9046.t1.utr5p1;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . exon 5999 7023 . + . ID=g9046.t1.exon1;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . CDS 6081 7023 . + 0 ID=cds.g9046.t1;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . exon 7106 7626 . + . ID=g9046.t1.exon2;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . CDS 7106 7626 . + 2 ID=cds.g9046.t1;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . exon 7735 8279 . + . ID=g9046.t1.exon3;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . CDS 7735 7983 . + 0 ID=cds.g9046.t1;Parent=g9046.t1 NODE_1536_length_10644_cov_40.6454 . three_prime_UTR 7984 8279 . + . ID=g9046.t1.utr3p1;Parent=g9046.t1 #PROT g9046.t1 g9046 MAADTCGETTITIPGVVEESPLSVRNRISVAATAKVHDTLDDVHDVYADIVNVAEVVSQRVKAKSRRILANRWQYLRLVIAVPILVGTLAGTYFLTSTVDEKKLLGTEEFILSDCGLTISRVGISDKKTWESVLTETRHQRFRIRSIVGNYTFPPDNQTIFFASSIIYQIMPVKVLRGLSFGILPHRTLLVTLRYNTSANCGTIDVASTALQTSKMFADAGRDGKVVLSSGGPHADQEYDAETGHFRPVSISGLSLAFFVLNVVVVWVAAPVIIYISLKLLRSQWRSATTGWVEFYFPEVSDDGALDNKRSVACGILFVAEHLCGNPIANTSSLSKALISTAVHIGLILAPTVPLIAFRFFLASSAFDDISYVGMAAYVGVAVVHISLYYTDVRWRYQRPFSAAFVAVYFLAYCAFVVLAVNTVIWFVLGMVIEPVRCASVLLFIASIVFYAYFSIHEFTNIRHKVSAAYKDVKGVILQKLGLSLTDMYVMIVGGILIVVCTATFLLVGYLTFDGSANSIAGIIPAVVTPIVSFVTKFTQLNAVKNRVRSYDVAAIGKDMSSRLALIKLD* # ORIGINAL: g9044.t1 original gene structure, not modified by PASA NODE_1536_length_10644_cov_40.6454 AUGUSTUS gene 3942 4382 . + . ID=g9044;Name=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS mRNA 3942 4382 . + . ID=g9044.t1;Parent=g9044;Name=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 3942 3981 . + . ID=g9044.t1.exon1;Parent=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 3942 3981 . + 0 ID=cds.g9044.t1;Parent=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 4083 4188 . + . ID=g9044.t1.exon2;Parent=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 4083 4188 . + 2 ID=cds.g9044.t1;Parent=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 4307 4382 . + . ID=g9044.t1.exon3;Parent=g9044.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 4307 4382 . + 1 ID=cds.g9044.t1;Parent=g9044.t1 #PROT g9044.t1 g9044 MAEARVCTVVLTGGPCAGKTTVQAVLSEYFEKRGWKVYRVPETASILLGGGVLFSELSSDQGMIPCGNAVGML* # ORIGINAL: g9047.t1 original gene structure, not modified by PASA NODE_1536_length_10644_cov_40.6454 AUGUSTUS gene 8011 9460 . - . ID=g9047;Name=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS mRNA 8011 9460 . - . ID=g9047.t1;Parent=g9047;Name=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 9338 9460 . - . ID=g9047.t1.exon1;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 9338 9460 . - 0 ID=cds.g9047.t1;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 9083 9180 . - . ID=g9047.t1.exon2;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 9083 9180 . - 0 ID=cds.g9047.t1;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 8674 8902 . - . ID=g9047.t1.exon3;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 8674 8902 . - 1 ID=cds.g9047.t1;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 8011 8235 . - . ID=g9047.t1.exon4;Parent=g9047.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 8011 8235 . - 0 ID=cds.g9047.t1;Parent=g9047.t1 #PROT g9047.t1 g9047 MSPVTLIYVLFFLVGGYAIVFGGARFHQGGVIGRLHFVLTQGICTATWTAFELWLPAGIVQCASRWSDWLTEQRNPVVQSFYVALFATGLGIYYRDVRQWQTDWVKSLVILLVVACIALFVTMCLSDPGRLSRHNVGAHLSRYGYDGVLFEKPLLASMLVCLGCVAVVLWGFFAYHMRLAVSNRTTNEASKLEVIRERRATSDGVGGFYDRGVVRNVTEAVFGN* # ORIGINAL: g9043.t1 original gene structure, not modified by PASA NODE_1536_length_10644_cov_40.6454 AUGUSTUS gene 2054 3511 . - . ID=g9043;Name=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS mRNA 2054 3511 . - . ID=g9043.t1;Parent=g9043;Name=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 3278 3511 . - . ID=g9043.t1.exon1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 3278 3511 . - 0 ID=cds.g9043.t1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 3054 3167 . - . ID=g9043.t1.exon2;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 3054 3167 . - 0 ID=cds.g9043.t1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 2823 2966 . - . ID=g9043.t1.exon3;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 2823 2966 . - 0 ID=cds.g9043.t1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 2414 2706 . - . ID=g9043.t1.exon4;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 2414 2706 . - 0 ID=cds.g9043.t1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 2178 2274 . - . ID=g9043.t1.exon5;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 2178 2274 . - 1 ID=cds.g9043.t1;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 2054 2077 . - . ID=g9043.t1.exon6;Parent=g9043.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 2054 2077 . - 0 ID=cds.g9043.t1;Parent=g9043.t1 #PROT g9043.t1 g9043 MGATSHRNKKRRLEIIKAMAAEVRQDAHHNSASRSHSPPTVTRSKSSSPRKMNGAEYPRTFLSRCRETTGRIWNSLVKCLKLMNPWLSARTLAALEARIISLEKELEHSRKIPAIQNFTGIASVVPAPPMALMSSAPGAPAPLPPPPPPVFKPIQIKLALPKKKAGDGTGMQTRSASKAISLDEIRSVRLRSSVSRVTPAPTVAQDGRQPLVSLDALRTVSLRRTTDGSVTKVAPSRQNVATNGVCFEEMRRKSLRRVAMSRSPGGTPARENRSPGNENGPGQFMTRALMRKFKNPLSASW* # ORIGINAL: g9045.t1 original gene structure, not modified by PASA NODE_1536_length_10644_cov_40.6454 AUGUSTUS gene 4515 5843 . + . ID=g9045;Name=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS mRNA 4515 5843 . + . ID=g9045.t1;Parent=g9045;Name=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 4515 4571 . + . ID=g9045.t1.exon1;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 4515 4571 . + 0 ID=cds.g9045.t1;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 4826 5098 . + . ID=g9045.t1.exon2;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 4826 5098 . + 0 ID=cds.g9045.t1;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 5252 5290 . + . ID=g9045.t1.exon3;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 5252 5290 . + 0 ID=cds.g9045.t1;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS exon 5592 5843 . + . ID=g9045.t1.exon4;Parent=g9045.t1 NODE_1536_length_10644_cov_40.6454 AUGUSTUS CDS 5592 5843 . + 0 ID=cds.g9045.t1;Parent=g9045.t1 #PROT g9045.t1 g9045 MAPATQSSFATEEAWILPHTTAADGAESFYTTENNSVRSEGIDLARTLDQKTMNAWLGHPYFDVIDNSTGFHEKLQRVVRAVCKRLHVDTDEGPAARTKKRKFLISAHPSMALKPVSGEGAKPALRAQRDPKCATIRKVRRCFLYETYHFQLDVFVGPDNNRCRNLALLETYVPASAETVRLPPFLTVAGEVTGDPAYSMYTLASS* # ORIGINAL: g11107.t1 original gene structure, not modified by PASA NODE_629_length_19951_cov_43.2427 AUGUSTUS gene 10020 18714 . + . ID=g11107;Name=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS mRNA 10020 18714 . + . ID=g11107.t1;Parent=g11107;Name=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 10020 10128 . + . ID=g11107.t1.exon1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 10020 10128 . + 0 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 10426 10773 . + . ID=g11107.t1.exon2;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 10426 10773 . + 2 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 11015 11347 . + . ID=g11107.t1.exon3;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 11015 11347 . + 2 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 11493 16980 . + . ID=g11107.t1.exon4;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 11493 16980 . + 2 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 17158 17300 . + . ID=g11107.t1.exon5;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 17158 17300 . + 1 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 17390 17969 . + . ID=g11107.t1.exon6;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 17390 17969 . + 2 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 18093 18164 . + . ID=g11107.t1.exon7;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 18093 18164 . + 1 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 18284 18355 . + . ID=g11107.t1.exon8;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 18284 18355 . + 1 ID=cds.g11107.t1;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 18501 18714 . + . ID=g11107.t1.exon9;Parent=g11107.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 18501 18714 . + 1 ID=cds.g11107.t1;Parent=g11107.t1 #PROT g11107.t1 g11107 MKVVNILIVALWAAACVVSPAASEVHPTFTGNTAPPEVDRTVTAVDSASLVSVIGGKAYTTTQDSLYGVVLISLDGYPGTRVTFTPTVDDPSIVSLDPVTFELNDYNWWDGFLVTLKGLKNGETKVSYKITTNPVLPKSKIADFSFKVVVAPAKTTFKLTGPEFDKYEESQKFDVSVALASAPIHTLSAKIESFLNDKFDGAPEETVTIEDTSSFTNENFSDNRKLTLSVPAGASGPVYYRISKSKPDGVDVESLSFSIDAFSPVDIIAKGVAPFPHNKGGVSNVNVHLSSKPLDTTIVEISLKDPKSTLKLGATSLTFTPANYDVDQKIEVSNVILTKDTVDDTANVFFSKKSGRSTVQSADFDAILKSSCDKDNTPPVITNGKKGPTITIDEDVSRALNTGIFVAQVLKDIVTDSDITDLFTPVTISSVFNILYNVVSKTSADFTAGTENIASIISPDVVRPLEPSLKDLSDARVNFFVDDVFNAAHGIKVVDLTTDGAGEWQFTTNNKVDAKWTKIAKEDKIEPWARIRYVPDANVAGDFSLTFVAWDRMQGLIACNMKPETIFSAEEGTEKYTISSINDRPERATTSPNDPDPIDYWAPSEDKSNDVAGFLVSSVATAFTDVDVGTKLGVAVVGFTPDATGATGVWEYKKDDTWTPIGAISSSSALLLPEGAKLRFKPVSAYLGSATISIRGWDASSKATAYTKVSLTDTVSVGSSISSGSAYVVTQTRKDCNGDAGKLKQKDACGTCGGDGASCAGCDGVPKSNTKLDLCGKCNGTNECLGCDLIPNSGKKFDSCNVCGGGDKDKDCNGVCFGKASVDDCGKCTGGNTGLTANFEKDCNGVCKGLSYRNPCGACVDESKGETKLKGMDCAKQCGGTWTLDKCGICADPLQSDTNKPYTDCNGVCIGAVDYGAKLDSCGVCVGGSTGKTDTKNACGSCDEDLSCLDCDLVAFGKKKLDACGICGGENACTAVSKVTPNFVPSKSAKTVTVNGAGFVSNEAVQCAIFDKEGNKKAIPGKFKSGTEVTCDIPSIDVISSVGIAVAIDSEEDPAYTAVRGSFTVYDSEMAIAGVAEDTFDVDVTANVAPKVQFTTENFLPSDLIATAFCEIVEQSIGKFKPKFTNVATTGSCDLPVQFIRSSKKSISVTVFLAEGFSFFQTNISSIAPAAEVASALFTDSATDIIVTFSKPVSLAGFDGTCTKIFSAESCKTLNGDDKAVIKFTSSSILYISLPKTATIIPNDFLTFATAVALLRTDVEKSYATSGTFQVRYIAANPVSPVLALTVPSSVGPCNDIIGTLDVISGSGARPLTMAWLVVSSDKTEDVSGIQALLTSTTFGHFKIPNDKLKAGSSYTFAVSGTNFLLLKSATVSGIVSVSANNLPRVEISGGVSREVYRYDSLTLVSSVSFSDCNGASGSEFVFTWEIDQDISLGASATSGTLRIPAFTLKSGKTYTVTLTAAVKGQEATLFAVTSTLISVLNGAIGTTISSPGNVISTTKSFSLSASCADRDDDPAAPTACSFLWSCRDTARNSLCFSTSGKVLLGDGGVVTNDEAAALTIPEATLEADRTYEFSVLVYKQTRSTSASVLLTLKSAQVPLVTLTPQTYTTTKKQTVSSRLVIQGSTDLADANVDFYLWESVAAPSAVVLDLTAANLFCSKPPSDATKSTLCIRRNKLTAGATYKFRLSVKAKDTEEEKGETGSNYVIFTVNEPPKGGDITVTSLDSTIFPAGFASSTVFIIGAAGWVDADLPLTYQFYVEKNDLGDQQLLTDVRTGASTTFRSTLPLLASTKYTVQRVFVKICDGQGECTTAFVENEVKEFVPEGGATNFFKNTIDDLDRVIASNDFSGFLNIITDAFNILATVDVCDDENALPLELTRSVIKTLSTIANELDPSATNINRIIYLSVKMIDGAIECVDENDLLTILNTIEAFVTLSRESNDIVLDTETDVLSIELLNKVQQRLDVLQVPISRRRRALSALDEVTVAMIKLRRVANEAYRVGITAIDDETAVIEKGAVTVRYNVFSVKKTNRDAEYTLGGVCLGASGSGSCASAFDGASFDDLDFQDCDVVDCSKLVAVTWTEFIGSVGDGITGETGSFVDIEIQELASIDESGKAVWNDYHVTKEYLLGVAIKNAKSGSQYGCRALDLETADAIKTGVITATEPAEGLVACQVDDAGVTLLVTSTVSAVITDQVNVGYVLGESTVAFKVALDTQPEVSKIDLTVFSDDETISTVSPTTLTFTRDNYDTPQEVTAAHIAEGITSFYVQTADSDVVAKSEVVSFEVVELPPICKICECNAVNNKKNWEVTCKDVELGAEVVNDNGFPILPPAVVKLVLDNIGLSKIVTEDIKAVDTLQYLDISNNKLVNYPSDLFDSLPKDAVILFGGNPWDCGCQAVEVAAWAARRRQGGATIVAGFCATPELLKDLPYDGFANRISRRPVDQCSSVPLFDTL* # ORIGINAL: g11106.t1 original gene structure, not modified by PASA NODE_629_length_19951_cov_43.2427 AUGUSTUS gene 5858 9019 . + . ID=g11106;Name=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS mRNA 5858 9019 . + . ID=g11106.t1;Parent=g11106;Name=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 5858 6211 . + . ID=g11106.t1.exon1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 5858 6211 . + 0 ID=cds.g11106.t1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 6311 7002 . + . ID=g11106.t1.exon2;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 6311 7002 . + 0 ID=cds.g11106.t1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 7264 7963 . + . ID=g11106.t1.exon3;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 7264 7963 . + 1 ID=cds.g11106.t1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 8243 8328 . + . ID=g11106.t1.exon4;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 8243 8328 . + 0 ID=cds.g11106.t1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 8490 8568 . + . ID=g11106.t1.exon5;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 8490 8568 . + 1 ID=cds.g11106.t1;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 8690 9019 . + . ID=g11106.t1.exon6;Parent=g11106.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 8690 9019 . + 0 ID=cds.g11106.t1;Parent=g11106.t1 #PROT g11106.t1 g11106 MAQVARTARRDKGTTATMRILEEGVRALEVSAGNDAADGFNPYLDILPRILTECARPGGEDWVDTSGRAGVGMGTAGRGVVGFDGAGHPKDIVLCVAHNTKRRENESFTRALEDGIVTKTRGYVSILKLEESPEVDAFASSELIRSAVIKMLAEKDELLRKRKFEQEEARRRRELKQASAASTAQHAQQQHPHQHQHQQQAPANFLDVVRLRASRHGGHHAPSLPNSHSQSSRHGARVPVPSIPSVAPLSVALSGKPARLRTRYDTTDAELEMLRKMVQRASKDSRSDSRQRRASSFGFDEEGILSYSQGSKSVLDLLPKRRPSMLRRRIPNIPVPLPPPMRRQRMTVRFAETKEESEEEELAIEDAEVQSAAKFALAMLSQTAEIEGYGDGQFKMVEISHAQRRSSEMGGDGRMYTLDLIVENPDGSGLSTYSVSVTALAEGGLRLDGVEDKGPLLAGITPMRPQERTATARRLLRRRHTAGIRLTKSADVTDVVDTDPLQRDFAAEEQSEDVVQDVPTDPTYNMFHIQGLFSIVKQKPAQVLEKKFQELDSGKQRRITIEELREKMIDEASEVQIQQMLNIFDLNGTGSIEPDEFVVVASLNDRLTGYNRGGTHIKSTALDLDLRLLEKYIGAYKDLFAIIDQDQDGHLGDTDLMVMMSASVGIELGTDRDLIEQIKALVDTNKDGVIDFMEFLRYIPFFLKIHQNAVDDPLSLDAAEKGRKLIHRIVRRRDHKVAASKRRMTQ* # ORIGINAL: g11104.t1 original gene structure, not modified by PASA NODE_629_length_19951_cov_43.2427 AUGUSTUS gene 211 1827 . - . ID=g11104;Name=g11104.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS mRNA 211 1827 . - . ID=g11104.t1;Parent=g11104;Name=g11104.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS exon 211 1827 . - . ID=g11104.t1.exon1;Parent=g11104.t1 NODE_629_length_19951_cov_43.2427 AUGUSTUS CDS 211 1827 . - 0 ID=cds.g11104.t1;Parent=g11104.t1 #PROT g11104.t1 g11104 MSSQTGCAPGAPSADSVQNDQSSQNSIAPPAHVRGMTVLDREAFRVAVDCPCLVVDARDTGLVLKRLHHFLFNVPKIRNAIKDDSMPDKRIILLSSRLSSGDVLGSLPADVRTLVIDKGYRLSSHRVECTYDHFSADQVLRAVLPETFGDVTTSYDAVGHIAHMNLRDHQLPYKALIGQVMLDKGGSGIRTVVNKIGNIESTFRFFQMEVLAGDNDLTAEVHENGCKFRFDFSRVYWNSRLQVEHERIVSLLPPGGVLLDMCAGVGPFAVPAAKRGRVVYANDLNPSSHAALVANGERNRVGSKLRAFNMDARDFVRHVTAFINSDASWPAYTHVTMNLPSLSLELLSCFRGVFASLPSDRLPVAMPTILCHCFTSSPDPAEDVIDRAAKSLGLASATELRTLCGGEVEAREVRDVAPKKLMMCLAFRLPESVALAATTVPTTATGTTGEVAELSRGVTEKSGGGTAVEAAEGGCMGGETDADGDALSNSGSAKRVREAMHPDHPDASTDESRDAGEAKRRRTMDADSVGSDAAIQPR* # PASA_UPDATE: g11105.t1, single gene model update, valid-1, status:[pasa:asmbl_8571,status:3], valid-1 NODE_629_length_19951_cov_43.2427 . gene 2339 5619 . + . ID=g11105;Name=g11105.t1 NODE_629_length_19951_cov_43.2427 . mRNA 2339 5619 . + . ID=g11105.t1;Parent=g11105;Name=g11105.t1 NODE_629_length_19951_cov_43.2427 . five_prime_UTR 2339 2641 . + . ID=g11105.t1.utr5p1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 2339 2821 . + . ID=g11105.t1.exon1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 2642 2821 . + 0 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 3050 3165 . + . ID=g11105.t1.exon2;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 3050 3165 . + 0 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 3370 3521 . + . ID=g11105.t1.exon3;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 3370 3521 . + 1 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 3726 3841 . + . ID=g11105.t1.exon4;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 3726 3841 . + 2 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 4231 4332 . + . ID=g11105.t1.exon5;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 4231 4332 . + 0 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . exon 4818 5619 . + . ID=g11105.t1.exon6;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . CDS 4818 5573 . + 0 ID=cds.g11105.t1;Parent=g11105.t1 NODE_629_length_19951_cov_43.2427 . three_prime_UTR 5574 5619 . + . ID=g11105.t1.utr3p1;Parent=g11105.t1 #PROT g11105.t1 g11105 MNGSGSGASVSSAGSASSTSFVPPPVIDRPSTINLRSDSPGRARKGRKGEDRQTVAIKSKYNGEFRRYSIDRRHALHFADLYDNVRRMHEIPTETAYNGGPSTATGGIRAPRFRLSFLDADQNISFVDNDSDLADAVAHMEPVFKVFIEERKKRTFSLPAALLGDKGKERRKSEDRTAAIGTPNQFRMVSRVLETYGEVRKLELTRRPGEPLGMFLTQGRELGRKDGLFVSTLQMGSVASTAFQPGDELLDANGRDLTALSAADAMGILSSGTVLTVTVRSPLSAVEQHKELLSVRHALPGDSGKRKGADTERKRISSPAQLLRVVRGKSSNHIVTPSSGGVTPPSANLTSTPTDRAPMLREKSLSSSGLPLSAVERKRAAESLDGSGSDSIGSPRDRSPSHSRTSLQRPISDLDLPGEGVDEQRGDGAAECGEDTAGAPCQRRISSSVESSTAGVPVASVDKMARLSFLDNW* # ORIGINAL: g11355.t1 original gene structure, not modified by PASA NODE_3172_length_4110_cov_35.0843 AUGUSTUS gene 49 1276 . + . ID=g11355;Name=g11355.t1 NODE_3172_length_4110_cov_35.0843 AUGUSTUS mRNA 49 1276 . + . ID=g11355.t1;Parent=g11355;Name=g11355.t1 NODE_3172_length_4110_cov_35.0843 AUGUSTUS exon 49 399 . + . ID=g11355.t1.exon1;Parent=g11355.t1 NODE_3172_length_4110_cov_35.0843 AUGUSTUS CDS 49 399 . + 0 ID=cds.g11355.t1;Parent=g11355.t1 NODE_3172_length_4110_cov_35.0843 AUGUSTUS exon 1181 1276 . + . ID=g11355.t1.exon2;Parent=g11355.t1 NODE_3172_length_4110_cov_35.0843 AUGUSTUS CDS 1181 1276 . + 0 ID=cds.g11355.t1;Parent=g11355.t1 #PROT g11355.t1 g11355 VYDRFVEIGRVALINEGAEKGRLAVILDIVDQKRALIDGPSTGVRRQAIAFRHLALTGITVPVPRGARAGTVRAVFDKAEAQAKFNQTAWAQRLAARTKRANLSDFERFKLMVARKQRSAIVNTEFNKLKKAAGSKAAPKKKAAPKKK* # PASA_UPDATE: g4200.t1, single gene model update, valid-1, status:[pasa:asmbl_6999,status:12],[pasa:asmbl_7000,status:12], valid-1 NODE_4121_length_2156_cov_35.1509 . gene 156 1997 . - . ID=g4200;Name=g4200.t1 NODE_4121_length_2156_cov_35.1509 . mRNA 156 1997 . - . ID=g4200.t1;Parent=g4200;Name=g4200.t1 NODE_4121_length_2156_cov_35.1509 . exon 1907 1997 . - . ID=g4200.t1.exon1;Parent=g4200.t1 NODE_4121_length_2156_cov_35.1509 . CDS 1907 1997 . - 0 ID=cds.g4200.t1;Parent=g4200.t1;5_prime_partial=true NODE_4121_length_2156_cov_35.1509 . exon 1495 1677 . - . ID=g4200.t1.exon2;Parent=g4200.t1 NODE_4121_length_2156_cov_35.1509 . CDS 1495 1677 . - 2 ID=cds.g4200.t1;Parent=g4200.t1 NODE_4121_length_2156_cov_35.1509 . exon 156 1189 . - . ID=g4200.t1.exon3;Parent=g4200.t1 NODE_4121_length_2156_cov_35.1509 . CDS 156 1189 . - 2 ID=cds.g4200.t1;Parent=g4200.t1;3_prime_partial=true #PROT g4200.t1 g4200 VLDRVKYRVAWQQHEATERKKQQEANEAEKLAFASIDWHDFVIVEKVEFYDGEEASLPPPVRPEELGIRLLAQQRYEQLKEEEASRDVEMEVDMEEDEVEEAPPKVLAPSTAPAVAPNPLAMPESDGPLIIRKDYDPKQRTAEPAAAAAVDMRVCPNCGARVPASEIDEHLRIELLDPRWKEQRDRMQAERNRHAALLAAGEQIGASLKHLAERRTDIFGAEETGVIGLKVGEEDEEDKPQKPAWDGHTASAGAVSRALQSTVTPEERMRDRQRQLGFNPEANKIGPSVIPGQGGASSAPHLQQQQQQQQQQQQQQQQQQPPPHLRPQTMPPHMGAPGMGPPGMRPPIPGHPGMGPPGMGMGMPGMGPPGMPMGMRPPGMGPPGMGLPGMGHPGMGMPGMGLPGMGPPGMGMGHPGMPPMRPIGAPMGMPPALQQN # PASA_UPDATE: g8106.t1, single gene model update, valid-1, status:[pasa:asmbl_1319,status:3], valid-1 NODE_1359_length_11787_cov_50.1972 . gene 3800 5389 . - . ID=g8106;Name=g8106.t1 NODE_1359_length_11787_cov_50.1972 . mRNA 3800 5389 . - . ID=g8106.t1;Parent=g8106;Name=g8106.t1 NODE_1359_length_11787_cov_50.1972 . five_prime_UTR 5261 5389 . - . ID=g8106.t1.utr5p1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . exon 5157 5389 . - . ID=g8106.t1.exon1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . CDS 5157 5260 . - 0 ID=cds.g8106.t1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . exon 4953 5035 . - . ID=g8106.t1.exon2;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . CDS 4953 5035 . - 1 ID=cds.g8106.t1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . exon 4658 4791 . - . ID=g8106.t1.exon3;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . CDS 4658 4791 . - 2 ID=cds.g8106.t1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . exon 4274 4408 . - . ID=g8106.t1.exon4;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . CDS 4274 4408 . - 0 ID=cds.g8106.t1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . exon 3800 4042 . - . ID=g8106.t1.exon5;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . CDS 3905 4042 . - 0 ID=cds.g8106.t1;Parent=g8106.t1 NODE_1359_length_11787_cov_50.1972 . three_prime_UTR 3800 3904 . - . ID=g8106.t1.utr3p1;Parent=g8106.t1 #PROT g8106.t1 g8106 MKIYAISLYYKAGTAVRLLADAFELSQFGFFQKGSVQEFMKFFSKTLAERTAPGMRQSVEEQAYVCHVHMRHDNLCGVIICDKEYPQRVAFSLVTKSIEDFAKAYTKDVYTKTTVPVSFPVLQQHLVKYQNPQEADALSKVQKDLDETKIILHKTIEGVLDRGEKLENIVERTNELSAQSKLFYKQAAKTNSCCVLQ* # ORIGINAL: g8104.t1 original gene structure, not modified by PASA NODE_1359_length_11787_cov_50.1972 AUGUSTUS gene 1 375 . - . ID=g8104;Name=g8104.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS mRNA 1 375 . - . ID=g8104.t1;Parent=g8104;Name=g8104.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 1 375 . - . ID=g8104.t1.exon1;Parent=g8104.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 1 375 . - 0 ID=cds.g8104.t1;Parent=g8104.t1 #PROT g8104.t1 g8104 MLPASSRTSRRLRGLDPVPHQPASDHQVPAMDNNNANGQGPANPPGPADPANAGPANAGGPPAPPQPNPVVDIAQIVAATTQAVIAQLLPHFAAAAGAGQPPINNSPAGQNGQQNPPGHGLGPNN # ORIGINAL: g8105.t1 original gene structure, not modified by PASA NODE_1359_length_11787_cov_50.1972 AUGUSTUS gene 918 3466 . + . ID=g8105;Name=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS mRNA 918 3466 . + . ID=g8105.t1;Parent=g8105;Name=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 918 1154 . + . ID=g8105.t1.exon1;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 918 1154 . + 0 ID=cds.g8105.t1;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 1267 1401 . + . ID=g8105.t1.exon2;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 1267 1401 . + 0 ID=cds.g8105.t1;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 1520 2632 . + . ID=g8105.t1.exon3;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 1520 2632 . + 0 ID=cds.g8105.t1;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 2825 3466 . + . ID=g8105.t1.exon4;Parent=g8105.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 2825 3466 . + 0 ID=cds.g8105.t1;Parent=g8105.t1 #PROT g8105.t1 g8105 MATAAPRPAFWRPGTAGPVEREAADAPVLAVYNPNVKLSLQQQRQRLPIFGFRKEILYLVETYPVVVLVGETGSGKTTQVPQYLHEAGWTAGGRMVACTQPRRVAATTIAARVAEEMCVRLGDEVGYCVRFDDASSPRTRVRFMTDGMLVRETMADPLLSRYSVIMVDEAHERTVASDLLLGLLKKILRRRRDLRVIVASATIETDRFLGFFGSDAAAAITVEGRMYPVDVHYKQHPVADYVSESVRVVSDIAAREPAGDILVFLTGQAEIEAAMEMVVDNAALARDLHVLPLYAGLTHPEQLRCFQRPPAGKRKVVFATNVAETSITIDGIVYVVDCMFVKSKIFDPATGQERLAVIPEAIATADQRAGRAGRMCPGKAYRLCPESVLLASCPRWAVPEMQRVDAAPVFLQLKALGIDNVARFDFLTPPPAACAALALELLFALGALDGGGRLTEAVGMRMAELPVAPLMSRALIASAEYGCTHEIIGIAAMMQVQGVFVREGTPAADAARDAFGAREGDLITLLNVLTAFEKTIASLESSRSANMHARLTAWCDKRGLGYRSLARAVEVRRQIARSLERLGIAPTVAAKNRGVMGAEDTTPIRKCIAAGFFAQAARLHPDGRYRSLRGGRVIEVHPSSVLHGLTQGKLYAQQAAHVVYGEIACVGERELMRDVTAVDEDWLVEIAPHFYKRTIGGGEDRAAKRPKV* # ORIGINAL: g8107.t1 original gene structure, not modified by PASA NODE_1359_length_11787_cov_50.1972 AUGUSTUS gene 6128 6778 . + . ID=g8107;Name=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS mRNA 6128 6778 . + . ID=g8107.t1;Parent=g8107;Name=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 6128 6274 . + . ID=g8107.t1.exon1;Parent=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 6128 6274 . + 0 ID=cds.g8107.t1;Parent=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 6346 6481 . + . ID=g8107.t1.exon2;Parent=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 6346 6481 . + 0 ID=cds.g8107.t1;Parent=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 6567 6778 . + . ID=g8107.t1.exon3;Parent=g8107.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 6567 6778 . + 2 ID=cds.g8107.t1;Parent=g8107.t1 #PROT g8107.t1 g8107 MASAAQTEEPAIGGGQAYARRMSVADDVLVSKCVVSTLTQPIDGYMIAQDFGIVVGSAVGCRDKVSFTLRGELEAIALSSTQVRNTATQLMIREAVNKGANAVLGVHYDIETIGTSGSGQLVTAYGTACTIVPLQVGRDGCAGGTKAVPRRVGIGEGAFGAAEE* # ORIGINAL: g8109.t1 original gene structure, not modified by PASA NODE_1359_length_11787_cov_50.1972 AUGUSTUS gene 10013 11557 . - . ID=g8109;Name=g8109.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS mRNA 10013 11557 . - . ID=g8109.t1;Parent=g8109;Name=g8109.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS exon 10013 11557 . - . ID=g8109.t1.exon1;Parent=g8109.t1 NODE_1359_length_11787_cov_50.1972 AUGUSTUS CDS 10013 11557 . - 0 ID=cds.g8109.t1;Parent=g8109.t1 #PROT g8109.t1 g8109 MALNYGGKRILAPMVRIGTLPSRLLALQYGADIVYSEEIIDHKLIECRRVVNPVLDTVDFNLPDGTNVFRTCAEERGRVVLQIGTADPERAVQVAQLFGDDVAGIDVNMGCPKEYSKKGGMGAALLTTPDLAENILSALVAASKVPVTAKIRILSTVVESIRFAHMVEATGVAAIAVHYRFTKERPRDAGHMDYLRAVVDAVKSVPVIANGGSLDIRSASDLDAFWAESGASSVMVARAAQWNMSVFRRDGLLPYEDVARAYLQRSLDCGNCLGNTKYCLLMLLASASDDARHALSQSANSMRELCAVWGLARECDATLATHAARAEAIGSRLNDFSVPMPIGHREIDVDSDEPPGCARDGDAATTPLSRDQGVVSTADGAADTTGESAVKRLASVAVGEDRGDTSQGPSKRRRIATEVDVRADRTAFSGDVTPKSSLLELARQRGLGQPSYDTRQSGRMFRSFVRVGGREYTAAGWRKSKRHAEQAAALACLTALDAASPFATPAADGHVAAL* # PASA_UPDATE: g8108.t1, single gene model update, valid-1, status:[pasa:asmbl_1321,status:3], valid-1 NODE_1359_length_11787_cov_50.1972 . gene 7067 9793 . + . ID=g8108;Name=g8108.t1 NODE_1359_length_11787_cov_50.1972 . mRNA 7067 9793 . + . ID=g8108.t1;Parent=g8108;Name=g8108.t1 NODE_1359_length_11787_cov_50.1972 . five_prime_UTR 7067 7150 . + . ID=g8108.t1.utr5p1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 7067 7243 . + . ID=g8108.t1.exon1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 7151 7243 . + 0 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 7351 7527 . + . ID=g8108.t1.exon2;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 7351 7527 . + 0 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 7647 8267 . + . ID=g8108.t1.exon3;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 7647 8267 . + 0 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 8420 8552 . + . ID=g8108.t1.exon4;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 8420 8552 . + 0 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 8737 8897 . + . ID=g8108.t1.exon5;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 8737 8897 . + 2 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 9008 9114 . + . ID=g8108.t1.exon6;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 9008 9114 . + 0 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . exon 9250 9793 . + . ID=g8108.t1.exon7;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . CDS 9250 9430 . + 1 ID=cds.g8108.t1;Parent=g8108.t1 NODE_1359_length_11787_cov_50.1972 . three_prime_UTR 9431 9793 . + . ID=g8108.t1.utr3p1;Parent=g8108.t1 #PROT g8108.t1 g8108 MNTQLGAALAIDFVGLGGDKENYNPLVDTQQALTTSVPARKPTLSVDRAHKEHHQQPWDLIRALDDDEKWAERVQIVTKQDHIIHLAMAEEVVRDVIEDVVAHADDGAATPTEEAIAGEATDDAAGHEFGEEEHFATPSKAMSQLEFDYFDKLGAGGSASTNNARLRESLYTRFDPLLSDAPQEASQPQPHPPANAAPPSSRVGANRTPPLAKKRLEAIPQSPADTHGDDNTLIVLTPARPTAPRHAEAPAMTPLRASGVAARAVAVAGDVEGSPLVAMLKYSEKDMTLAKKTVKEESEKEIESLRAQVKALTEQTTVDGEKNKNLTKILDDYESVMTSMLAEMEAEKATHAAALQTALRDKEQALGEFRSVETAFSDLHRRYEKLKETNDSLKKNEDILKQALSATQQDLVTFEQRYNALKRHAEDKLEMANQEIERVRAGHSTELAVVSARLKKSEIAIAGLERTLAQKEQENKELVTICDELIAKVK* # ORIGINAL: g9530.t1 original gene structure, not modified by PASA NODE_4174_length_2075_cov_37.0705 AUGUSTUS gene 82 1458 . - . ID=g9530;Name=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS mRNA 82 1458 . - . ID=g9530.t1;Parent=g9530;Name=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS exon 1335 1458 . - . ID=g9530.t1.exon1;Parent=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS CDS 1335 1458 . - 0 ID=cds.g9530.t1;Parent=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS exon 917 989 . - . ID=g9530.t1.exon2;Parent=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS CDS 917 989 . - 2 ID=cds.g9530.t1;Parent=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS exon 82 550 . - . ID=g9530.t1.exon3;Parent=g9530.t1 NODE_4174_length_2075_cov_37.0705 AUGUSTUS CDS 82 550 . - 1 ID=cds.g9530.t1;Parent=g9530.t1 #PROT g9530.t1 g9530 MTDQINMLGMMAYDSMTANEAACKYLRANTSSWAEWIPFEARRLGWYIPKYMTEVNPYISYWRILAHPSSASLFTAPNVTLANNSSNVDIRCTSVAQTVQSLINGSSSDAAAVTSVRSYVDSILSNGTASANGSRPVLYIPDKAVWRSYDEQIVKNLDIDFVTTVVQEPTEANLLSLFANASRVKKGHVSYFWSPHFIHSTRSPIQLTRVQLPDWTPECQAK # ORIGINAL: g9072.t1 original gene structure, not modified by PASA NODE_2156_length_7482_cov_40.8962 AUGUSTUS gene 621 1118 . - . ID=g9072;Name=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS mRNA 621 1118 . - . ID=g9072.t1;Parent=g9072;Name=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS exon 1017 1118 . - . ID=g9072.t1.exon1;Parent=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS CDS 1017 1118 . - 0 ID=cds.g9072.t1;Parent=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS exon 810 932 . - . ID=g9072.t1.exon2;Parent=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS CDS 810 932 . - 0 ID=cds.g9072.t1;Parent=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS exon 621 710 . - . ID=g9072.t1.exon3;Parent=g9072.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS CDS 621 710 . - 0 ID=cds.g9072.t1;Parent=g9072.t1 #PROT g9072.t1 g9072 MAKSPKQNAKPVGKAKSGPTKSAIKPKKDSLPKKLTKGKTDVLFEKVNGQLDAMRTTMLPQPANPPLLAERAKKEPRFTIDEVERAEAEERARFEDALKDMAAM* # PASA_UPDATE: g9074.t1, single gene model update, valid-1, status:[pasa:asmbl_3637,status:12], valid-1 NODE_2156_length_7482_cov_40.8962 . gene 3994 6870 . - . ID=g9074;Name=g9074.t1 NODE_2156_length_7482_cov_40.8962 . mRNA 3994 6870 . - . ID=g9074.t1;Parent=g9074;Name=g9074.t1 NODE_2156_length_7482_cov_40.8962 . five_prime_UTR 6804 6870 . - . ID=g9074.t1.utr5p1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 6798 6870 . - . ID=g9074.t1.exon1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 6798 6803 . - 0 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 6472 6520 . - . ID=g9074.t1.exon2;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 6472 6520 . - 0 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 6059 6244 . - . ID=g9074.t1.exon3;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 6059 6244 . - 2 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 5720 5825 . - . ID=g9074.t1.exon4;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 5720 5825 . - 2 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 5309 5451 . - . ID=g9074.t1.exon5;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 5309 5451 . - 1 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 4864 4890 . - . ID=g9074.t1.exon6;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 4864 4890 . - 2 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 4400 4518 . - . ID=g9074.t1.exon7;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 4400 4518 . - 2 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . exon 3994 4225 . - . ID=g9074.t1.exon8;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . CDS 4085 4225 . - 0 ID=cds.g9074.t1;Parent=g9074.t1 NODE_2156_length_7482_cov_40.8962 . three_prime_UTR 3994 4084 . - . ID=g9074.t1.utr3p1;Parent=g9074.t1 #PROT g9074.t1 g9074 MESLRMQGKSVIVTGGAKGIGEGCVRACHRLGADVLVFDMDEVAMHALANELNSKGLGRVVVQKGDVRSESDVRLCMTLAVGNFLGIDALICNAGWHPPAVSIEDASVDDFESIMRLNLTSTFLFCKYATPLLKKSKGAIVIVSSHTAVYGQSNAVPYCASKAGQLGLMKGLAVDLAPFQVRVNAVCPSNVLTPLMTSWAQSLPDPAKALAELSAQQLIGRMATINEIGSICAFLASPDAAFITGQEIVADGGANLNK* # PASA_UPDATE: g9073.t1, single gene model update, valid-1, status:[pasa:asmbl_3636,status:3], valid-1 NODE_2156_length_7482_cov_40.8962 . gene 1341 3655 . - . ID=g9073;Name=g9073.t1 NODE_2156_length_7482_cov_40.8962 . mRNA 1341 3655 . - . ID=g9073.t1;Parent=g9073;Name=g9073.t1 NODE_2156_length_7482_cov_40.8962 . five_prime_UTR 3412 3655 . - . ID=g9073.t1.utr5p1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 3369 3655 . - . ID=g9073.t1.exon1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 3369 3411 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 3168 3187 . - . ID=g9073.t1.exon2;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 3168 3187 . - 2 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 2861 2938 . - . ID=g9073.t1.exon3;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 2861 2938 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 2425 2571 . - . ID=g9073.t1.exon4;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 2425 2571 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 2068 2136 . - . ID=g9073.t1.exon5;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 2068 2136 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 1714 1899 . - . ID=g9073.t1.exon6;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 1714 1899 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . exon 1341 1549 . - . ID=g9073.t1.exon7;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . CDS 1466 1549 . - 0 ID=cds.g9073.t1;Parent=g9073.t1 NODE_2156_length_7482_cov_40.8962 . three_prime_UTR 1341 1465 . - . ID=g9073.t1.utr3p1;Parent=g9073.t1 #PROT g9073.t1 g9073 MKALFGGNSTEELQKQLFNMKFSAKQMERMAQKAEKEQKGQQDKIKKAIQQGNTEGARIYAENAIRKKNESNNFLRMSSRLDAVAQRIQTAITMKQVTKDMGNLVKGLGSAMQSMDLEKMSKTMDQFEKQFEDLDVRSQVLENSMSAATTLQTPVDQVDSLIQQVAEEHGLEVAGQLDQAKVGTASLSVKEEQELSTRLAKLRDQAHG* # ORIGINAL: g9071.t1 original gene structure, not modified by PASA NODE_2156_length_7482_cov_40.8962 AUGUSTUS gene 2 112 . + . ID=g9071;Name=g9071.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS mRNA 2 112 . + . ID=g9071.t1;Parent=g9071;Name=g9071.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS exon 2 112 . + . ID=g9071.t1.exon1;Parent=g9071.t1 NODE_2156_length_7482_cov_40.8962 AUGUSTUS CDS 2 112 . + 0 ID=cds.g9071.t1;Parent=g9071.t1 #PROT g9071.t1 g9071 SNMNDLVSEYQQYQDATAEEEGEVDGEEEEADAEEA* # PASA_UPDATE: g730.t1, single gene model update, valid-1, status:[pasa:asmbl_6765,status:12], valid-1 NODE_3956_length_2464_cov_35.5278 . gene 25 2394 . + . ID=g730;Name=g730.t1 NODE_3956_length_2464_cov_35.5278 . mRNA 25 2394 . + . ID=g730.t1;Parent=g730;Name=g730.t1 NODE_3956_length_2464_cov_35.5278 . five_prime_UTR 25 43 . + . ID=g730.t1.utr5p1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 25 66 . + . ID=g730.t1.exon1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 44 66 . + 0 ID=cds.g730.t1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 458 646 . + . ID=g730.t1.exon2;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 458 646 . + 1 ID=cds.g730.t1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 959 1106 . + . ID=g730.t1.exon3;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 959 1106 . + 1 ID=cds.g730.t1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 1417 1655 . + . ID=g730.t1.exon4;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 1417 1655 . + 0 ID=cds.g730.t1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 1899 2038 . + . ID=g730.t1.exon5;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 1899 2038 . + 1 ID=cds.g730.t1;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . exon 2229 2394 . + . ID=g730.t1.exon6;Parent=g730.t1 NODE_3956_length_2464_cov_35.5278 . CDS 2229 2394 . + 2 ID=cds.g730.t1;Parent=g730.t1;3_prime_partial=true #PROT g730.t1 g730 MSWWSDLWLNEGFATWISYLAVDILFPDWQIWTQFAYADLGNALRLDSLITSHPIEVEVKSSGEINEIFDSISYSKGSAVIRMLAAFLGDADFKSGLRLYLRRHKYANACTADLWKALEEVSGKPVGEVMNRYTKQTGYPVLTIAVDDSHVSANGCSRCFKLRQSRFLVDETVTSDETLWWVPVSVAVKGSTDVQQVSLSKREDSVVVNVPSASFDGWIKFNVGQTGFYRTKYPSSMVQPLINAIKGFEIGPTDRLGVMNDAFALAKAGLLPTTDALRIASSFVNETDYTVWVDLTSNLCE # PASA_UPDATE: g7379.t1, single gene model update, valid-1, status:[pasa:asmbl_3726,status:3], valid-1 NODE_2191_length_7341_cov_43.0718 . gene 2200 5424 . - . ID=g7379;Name=g7379.t1 NODE_2191_length_7341_cov_43.0718 . mRNA 2200 5424 . - . ID=g7379.t1;Parent=g7379;Name=g7379.t1 NODE_2191_length_7341_cov_43.0718 . five_prime_UTR 5155 5424 . - . ID=g7379.t1.utr5p1;Parent=g7379.t1 NODE_2191_length_7341_cov_43.0718 . exon 3325 5424 . - . ID=g7379.t1.exon1;Parent=g7379.t1 NODE_2191_length_7341_cov_43.0718 . CDS 3325 5154 . - 0 ID=cds.g7379.t1;Parent=g7379.t1 NODE_2191_length_7341_cov_43.0718 . exon 2200 3125 . - . ID=g7379.t1.exon2;Parent=g7379.t1 NODE_2191_length_7341_cov_43.0718 . CDS 2646 3125 . - 0 ID=cds.g7379.t1;Parent=g7379.t1 NODE_2191_length_7341_cov_43.0718 . three_prime_UTR 2200 2645 . - . ID=g7379.t1.utr3p1;Parent=g7379.t1 #PROT g7379.t1 g7379 MGSAASTAQVAPSKTQAGIPPTNQAELNRLRKEIDGLKKEVAAKPKTKEGRLYDDVLREKDEEINKLKANIKAMDAQFKALRKAQEIITHNLAAAKNDDEKEEYRRMEVCAEVDQSILFDVPVAQRNRTKTPSDQSVIEMAVSESILFTSMDEAQKLAVIQEMYERRVKAGDVVIKQGDDDAIFYVISGGDFEVLISTDDGVQQSVLTIGRGKSFGELALMYNCPRNATVKARTDGVLWAIDRASFRTILRDISEGRMKECKDFLRSVPVLGSRLREEDLTRLTVALEEQTYQHGDHIIRQGDHGDRFFILKKGRVIVSKTINETDGQSIDVQELVQGDFFGEMALLNNEQRAANVIAKSESVECLTLGRTAFEKLLGPLESMKEKAKTRRDVLDEKAEAARSSRGTNLNHVGTDSPSRHGSEPVLDQHDSVSSKQKKLYFDGVNANHRPDVQLSDLKELVTLGRGAFGSVRLMHCSKTGETFAMKCLSMAKVIKLGQRQHVLNEKNVLSKMSHPFILKLYQTFKDQRNLYFLLEVCLGGEVFTLLRRRKKFSKSWAMFYGASVCLVLEYLHDHGIVYRDLKPENLLLDREGFLKVADFGFAKPVDGKSKTFTLCGTPDYIAPEVLKNVGHDRAADWWSYGVLIYEMLAGHAPFEGRDQMETYKKILSGKVNFGKDFNKNEMDLISKLLHVNQSKRLGNLRGGAVDIKRHKWFEGFDWEGLEKREMTPPYVPAVKSVTDASNFPTDYFASQKEDANEVKEDHRHLFEDF* # ORIGINAL: g7378.t1 original gene structure, not modified by PASA NODE_2191_length_7341_cov_43.0718 AUGUSTUS gene 218 1677 . + . ID=g7378;Name=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS mRNA 218 1677 . + . ID=g7378.t1;Parent=g7378;Name=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS exon 218 485 . + . ID=g7378.t1.exon1;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS CDS 218 485 . + 0 ID=cds.g7378.t1;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS exon 801 925 . + . ID=g7378.t1.exon2;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS CDS 801 925 . + 2 ID=cds.g7378.t1;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS exon 1132 1209 . + . ID=g7378.t1.exon3;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS CDS 1132 1209 . + 0 ID=cds.g7378.t1;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS exon 1456 1677 . + . ID=g7378.t1.exon4;Parent=g7378.t1 NODE_2191_length_7341_cov_43.0718 AUGUSTUS CDS 1456 1677 . + 0 ID=cds.g7378.t1;Parent=g7378.t1 #PROT g7378.t1 g7378 LGPASDVWSLGCILYAMTYGQTPFYHLTPLQKLQCIPDPSYEISFPAIDNADLLDVLRRCLRRNPKERPTIRELLDHAFLRPEGQGKSPESLLSLNEAQLYELIAQVLSVGANAAIDGASLSSGSVVALSREIVRQVRSGEQLNLANVLSLSAPHTKSRQSSTSQSDDKENQPMTHVQTHSAPHGYAPTPTATAAVNTLTARSLPQSAAYAKTPGNTVHSMGNMGQRAIA* # PASA_UPDATE: g7380.t1, single gene model update, valid-1, status:[pasa:asmbl_3725,status:3], valid-1 NODE_2191_length_7341_cov_43.0718 . gene 5846 6896 . + . ID=g7380;Name=g7380.t1 NODE_2191_length_7341_cov_43.0718 . mRNA 5846 6896 . + . ID=g7380.t1;Parent=g7380;Name=g7380.t1 NODE_2191_length_7341_cov_43.0718 . five_prime_UTR 5846 5945 . + . ID=g7380.t1.utr5p1;Parent=g7380.t1 NODE_2191_length_7341_cov_43.0718 . exon 5846 6257 . + . ID=g7380.t1.exon1;Parent=g7380.t1 NODE_2191_length_7341_cov_43.0718 . CDS 5946 6257 . + 0 ID=cds.g7380.t1;Parent=g7380.t1 NODE_2191_length_7341_cov_43.0718 . exon 6359 6896 . + . ID=g7380.t1.exon2;Parent=g7380.t1 NODE_2191_length_7341_cov_43.0718 . CDS 6359 6709 . + 0 ID=cds.g7380.t1;Parent=g7380.t1 NODE_2191_length_7341_cov_43.0718 . three_prime_UTR 6710 6896 . + . ID=g7380.t1.utr3p1;Parent=g7380.t1 #PROT g7380.t1 g7380 MSSCLVFSDAPLPSLADFVAKSVSQPSNVLMLRSIPRAAFESKTELAEIRSELEKSGVIVSFQPLKSFGRLRVVYDTIEAAVVAALHFAGALCHGIEIKSSFAERQFIQAPEDIVVPTRLAVPLSTRQFLLSPPASPPVGWEPITEHHPVIDHDLVAAICSMSNKGESYELFKATDGLPGIMVMDCDADATGSDRGGDGGESESFTLPSIIKERTRMPDY* # PASA_UPDATE: g4630.t1, single gene model update, valid-1, status:[pasa:asmbl_2042,status:3], valid-1 NODE_1585_length_10353_cov_42.3269 . gene 3136 8707 . + . ID=g4630;Name=g4630.t1 NODE_1585_length_10353_cov_42.3269 . mRNA 3136 8707 . + . ID=g4630.t1;Parent=g4630;Name=g4630.t1 NODE_1585_length_10353_cov_42.3269 . five_prime_UTR 3136 3639 . + . ID=g4630.t1.utr5p1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . exon 3136 4062 . + . ID=g4630.t1.exon1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . CDS 3640 4062 . + 0 ID=cds.g4630.t1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . exon 4298 6019 . + . ID=g4630.t1.exon2;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . CDS 4298 6019 . + 0 ID=cds.g4630.t1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . exon 6263 7135 . + . ID=g4630.t1.exon3;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . CDS 6263 7135 . + 0 ID=cds.g4630.t1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . exon 7486 7665 . + . ID=g4630.t1.exon4;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . CDS 7486 7665 . + 0 ID=cds.g4630.t1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . exon 7845 8707 . + . ID=g4630.t1.exon5;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . CDS 7845 8651 . + 0 ID=cds.g4630.t1;Parent=g4630.t1 NODE_1585_length_10353_cov_42.3269 . three_prime_UTR 8652 8707 . + . ID=g4630.t1.utr3p1;Parent=g4630.t1 #PROT g4630.t1 g4630 MRRIDNGHAGGCIRGCGMRTRAAVSFALRRAGTLFFITRFRGKRRVLTGFIVLSLLCLVGVFSPNITDYIRNTAGSDIEIVASPNKRLVDTLLLKIESRDAAHAALDNGRDPLLRALSAYTDDPAWDLSASHGVDHADDFNHGDHGTGDSKQVPSIFVAILSRPENLNKRKALRDLSLGATLEKLTGRTWSFRVSHSFFVLADTRRPLRARQTATYKDVYSESLVRSLHAESKKHNDIVFVGESEIDAASRVLGTGLSCRPNTGATPDASSDRPPILWSRRPCELLSVFSHVLRFEKFHTLLVISDKVFLRPEIIFPQLGALALSSHFPGGRGVAVTPLRVSLRGDNAAPEGLKPQLKSRAAPAEAEVDDDHSFDTGTASASTSTDAPGTARVDSRRPSLPRNFVVCDVVSDRPFDLNPRSPNFDARVCDDFLSVDKLSVSANGSTVVVSRAQPLTEDLLALLGAADKRPQGVPSAVLMSGGGSPASANGRDGRTYGTDTQRTSRGAQSAASAMSGGRQQTLRLSASKGHDVIASAGVIINHVFPDHCRESTFAASWNAVHSIVMNARVDMAVRDKPRGLWLRSQEGVLEGPLAQRGMPFPLHFDTVSNGNEASIEHGFGQDNTEKGNRVKGGAAVADSPVENANAFMPSLQPATVSATLDKAARVRALSGRLPLLPLYKRNDVTLGAWMLAAGATLIDDKMHFSVGVQDEAAEEDRHPASLCKEEAAVIGVDTSQAMFDLTARLRTHGHVCSHVCACPLNRRRRNVNGQTEESNIGSAQSVDSGGDMAGSHKGSSIAPSVEGARVMVAKPADSKKAVGGAGIKASLSTSAPGAGPACVAASSREFQHLSGAPIEHSIDPIDTFVVVFTSASEAAMKRRSVIRAQLHAQIYGIHKHADHARGKEGTAQHSDGGVDARALRDGKVSSGNGILAGDTTDTRKDSAESKSEKAAAPERRMDFQYVFVFQEDYEGGPIDRLRHASVDVSELVEHTDFMLLHEPINFREVELDVLSQLVVAVSPRDHSDNIMIVPNGNHHDRDAHSTPADSESVTDTDSESNQAQVSESAATMDDATRRSRASHLLRAVLHSQRCVRRVIFVGDAVWTNVTAVDAVLNKAGFDACSSALAVPSSMGLPADTDDVASLLSDVESVSVNDDHVGLEPPQRLPNSATPNGSESGPSDVQAHLNNNRADLTADSADRIRDSNGSNNGGETESMNSIPGTTASTKRTSKDPCVAKVTSVGSLLLHIDSLVTGTRNDLGTKTVDEREPEPLLEPQSEREEGRHGGGVRWMVFSRGLASTLSSLFVPHPLLSAPSADIRHKLVAWKESERDPFPLV* # PASA_UPDATE: g4629.t1, single gene model update, valid-1, status:[pasa:asmbl_2040,status:12],[pasa:asmbl_2041,status:12], valid-1 NODE_1585_length_10353_cov_42.3269 . gene 291 2354 . + . ID=g4629;Name=g4629.t1 NODE_1585_length_10353_cov_42.3269 . mRNA 291 2354 . + . ID=g4629.t1;Parent=g4629;Name=g4629.t1 NODE_1585_length_10353_cov_42.3269 . five_prime_UTR 291 298 . + . ID=g4629.t1.utr5p1;Parent=g4629.t1 NODE_1585_length_10353_cov_42.3269 . exon 291 611 . + . ID=g4629.t1.exon1;Parent=g4629.t1 NODE_1585_length_10353_cov_42.3269 . CDS 299 611 . + 0 ID=cds.g4629.t1;Parent=g4629.t1 NODE_1585_length_10353_cov_42.3269 . exon 721 2354 . + . ID=g4629.t1.exon2;Parent=g4629.t1 NODE_1585_length_10353_cov_42.3269 . CDS 721 1850 . + 2 ID=cds.g4629.t1;Parent=g4629.t1 NODE_1585_length_10353_cov_42.3269 . three_prime_UTR 1851 2354 . + . ID=g4629.t1.utr3p1;Parent=g4629.t1 #PROT g4629.t1 g4629 MGAITVFSMNATLPRRTFQPGETFKLSVSLRDKPTYRVALNISSRVPANVNVGTTTLVFTPENYGIAQGIDVTITAGAAVRPYFRFSLNQTRPVTCEALCLRVNASSSSSVAPPQSSAPPSSPPAPSSVVESSNPPPSSVAPSSNPPPQSSVAQSSVAGTSAAPAVSSAQSSSRSAITTQASNAASGTSRAASSGTQNANGVTSTSAKSTTVAAAASSTTQVAAAATTTSVAQDPPAESVPRGYTFVSGTTPSRFLSSSKALLEFRMAIAEKLNVPVSSVVITGATEDTKYVELTVIEFYVSGANDEESKALTSSAVQVLISNPPTLTNVTVVGVRGVPYISLDKESINYAAIIIPTVVIGLAVIGVSYYCGRKHRDVPKKGTIAPAPAVSPSPHADEVQPFTPTQPVASSIVQPHIRNEATIAEPVAASSVAGVATPDPTVRPKSSKAWEAVGDADALAVGESVDAAIVNSPAVGESDV* # ORIGINAL: g4631.t1 original gene structure, not modified by PASA NODE_1585_length_10353_cov_42.3269 AUGUSTUS gene 9416 10307 . - . ID=g4631;Name=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS mRNA 9416 10307 . - . ID=g4631.t1;Parent=g4631;Name=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS exon 10302 10307 . - . ID=g4631.t1.exon1;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS CDS 10302 10307 . - 0 ID=cds.g4631.t1;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS exon 10044 10195 . - . ID=g4631.t1.exon2;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS CDS 10044 10195 . - 0 ID=cds.g4631.t1;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS exon 9794 9936 . - . ID=g4631.t1.exon3;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS CDS 9794 9936 . - 1 ID=cds.g4631.t1;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS exon 9416 9522 . - . ID=g4631.t1.exon4;Parent=g4631.t1 NODE_1585_length_10353_cov_42.3269 AUGUSTUS CDS 9416 9522 . - 2 ID=cds.g4631.t1;Parent=g4631.t1 #PROT g4631.t1 g4631 MPVYSLAFSENGKYLLSNGRDSRVRLWEVTSGRVIHTYEGAVQTPLRTQCAFSVWTADNSSKENNNKRSYNEDYVLVGDEASSSVVMWDSRSGERLKTFSGHTAPIRAIATTPESSGFMTSGEDCRMRYWAIDIV* # PASA_UPDATE: g1317.t1, single gene model update, valid-1, status:[pasa:asmbl_2915,status:12], valid-1 NODE_1889_length_8729_cov_39.6848 . gene 42 3420 . + . ID=g1317;Name=g1317.t1 NODE_1889_length_8729_cov_39.6848 . mRNA 42 3420 . + . ID=g1317.t1;Parent=g1317;Name=g1317.t1 NODE_1889_length_8729_cov_39.6848 . exon 42 139 . + . ID=g1317.t1.exon1;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . CDS 42 139 . + 0 ID=cds.g1317.t1;Parent=g1317.t1;5_prime_partial=true NODE_1889_length_8729_cov_39.6848 . exon 375 682 . + . ID=g1317.t1.exon2;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . CDS 375 682 . + 1 ID=cds.g1317.t1;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . exon 957 1063 . + . ID=g1317.t1.exon3;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . CDS 957 1063 . + 2 ID=cds.g1317.t1;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . exon 1246 2629 . + . ID=g1317.t1.exon4;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . CDS 1246 2629 . + 0 ID=cds.g1317.t1;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . exon 2855 3420 . + . ID=g1317.t1.exon5;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . CDS 2855 3162 . + 2 ID=cds.g1317.t1;Parent=g1317.t1 NODE_1889_length_8729_cov_39.6848 . three_prime_UTR 3163 3420 . + . ID=g1317.t1.utr3p1;Parent=g1317.t1 #PROT g1317.t1 g1317 VTKDTLWKSVYRSLGGDATLTSASYSVRILYEKFLYPYEQETIRPSAAGKRAATAATDDVGPAPTEKKSEVGTRPSPGRRGATSRQLSNSNGLNNSTNSNGGRRSTGSKASPRRSKGGIEDSDESESDSDSSESEGEFVAVEDPADIPEELGENWRVSVKHPQDRKIYKAKVLMRSFLSATNKSKYRYFVHYDGWNARYDEWVAATCIMGYEARGPGAGSSDATATATAGDVKTAPNHPRGDAKGGNSDASEEKEKEKQPTAKSKGGRSSVTPTPTVVPKSSGVTRSGSALAVDVDADDKKEKIVDGARDRKRKSIEQVQSVRAKRRSGVRSEEEQSPDEADSKKPVETIVIADEEKAGNANGIGRDRKRASDDSSIQTESKRRSVGRRSGGSGKPAKGDDDERDRDVSDVSVLSRQSVNANASANAGARSSSGAKVPPAPVESETVGDAAAANVPVAAGDTEPVVVDAKPTPDVAASTAAGDVDVASELATSKRRLKRKRGRFAAASDEEVGDEKELPSHTQFAGTKAETSDDSVATKSPSDLPAVVPTVKTDSNMGACAMDGVVMGSGDTNSACDGLAVVPKIEGECAAGGEGAGKGDEASEVTVSTDHDGAKGDDLVRPKRERRDKKKTAAAEVIALDLPPFPVNGDATDLDYEMRLELLRKEYAKCKSELQRCTERSSRKKRGDAFVGFGGEGESVGADGLGGQDEGHVDALAGSAAGAMVQLQELQASG* # ORIGINAL: g1319.t1 original gene structure, not modified by PASA NODE_1889_length_8729_cov_39.6848 AUGUSTUS gene 6255 8632 . + . ID=g1319;Name=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS mRNA 6255 8632 . + . ID=g1319.t1;Parent=g1319;Name=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 6255 6284 . + . ID=g1319.t1.exon1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 6255 6284 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 6515 6550 . + . ID=g1319.t1.exon2;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 6515 6550 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 6757 6834 . + . ID=g1319.t1.exon3;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 6757 6834 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 7119 7217 . + . ID=g1319.t1.exon4;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 7119 7217 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 7812 8074 . + . ID=g1319.t1.exon5;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 7812 8074 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 8358 8523 . + . ID=g1319.t1.exon6;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 8358 8523 . + 1 ID=cds.g1319.t1;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 8597 8632 . + . ID=g1319.t1.exon7;Parent=g1319.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 8597 8632 . + 0 ID=cds.g1319.t1;Parent=g1319.t1 #PROT g1319.t1 g1319 MSFAKFMNQKDFHPSNMRNQRRIWIAEQKALASDKKTKDLQKEYKDEQEWYAHKEALGVSRADSDLERKKFSINFMYQLPPGLAKTAVKSTRDIHREILEAAAAGASSASHRDGDATTSKDAPAAGLRGAPREGEYTKDIAVRDKPFGIEVRNVHCMRCGAQGHSNTDRVCPLFSVLPPEAKRLDYEDPMAVFSADPIKKGKAGLVLKSTVLVGRRIDASDPNQEGWLGNSSQTN* # ORIGINAL: g1318.t1 original gene structure, not modified by PASA NODE_1889_length_8729_cov_39.6848 AUGUSTUS gene 3856 5838 . - . ID=g1318;Name=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS mRNA 3856 5838 . - . ID=g1318.t1;Parent=g1318;Name=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 5749 5838 . - . ID=g1318.t1.exon1;Parent=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 5749 5838 . - 0 ID=cds.g1318.t1;Parent=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 5457 5534 . - . ID=g1318.t1.exon2;Parent=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 5457 5534 . - 0 ID=cds.g1318.t1;Parent=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS exon 3856 5286 . - . ID=g1318.t1.exon3;Parent=g1318.t1 NODE_1889_length_8729_cov_39.6848 AUGUSTUS CDS 3856 5286 . - 0 ID=cds.g1318.t1;Parent=g1318.t1 #PROT g1318.t1 g1318 MLSAVSVAIAGIAVFVLAFVSKLLGAPAHKKGFEWLSGAERLMTYISYGYEKERPPVLHAMIAFDKSLDNAVVIQAFQSIVAGQPRLCKRRGIFMLPLVPSWLFSLLYLEDDPSFDLNRHISFEEADLWFPGDDRKSDAALAAFMQKSLADPLDPAIPLWRVRVVNAPPHATGKGSILLFCFHHSLADGASANILILNLMESVPVTTGTHPRVTADASGATPVVHGGEMHKVEFSHRSGSKGQARATNQSTGLVRIVRAMVGAVLILLRGVHGVWRLTYYQMSLFFIRTNPAESLGPVTPTVPKRVGWTRPLPLSEVKVVREAFSVTVNDVMLACLSGALRRLALANASGASASGTTFRDVMCSIPMSMRREVHRTDPIGNCVSGAWVFLPIACGDAVAVVKSIHERMAYIKTPAIPIFNHHAMKGVGFMPLAIIAAMNNSYFCNGKVALTNVPLPQLSMRFRGTDASMRGIRLFGLLPTLGGICVAVSGCDGTLVASIVADEHLPTASPFQIAEYMEEELRTLVAAARAVR* # PASA_UPDATE: g1431.t1, single gene model update, valid-1, status:[pasa:asmbl_2159,status:12], valid-1 NODE_1617_length_10172_cov_44.7715 . gene 6743 9310 . + . ID=g1431;Name=g1431.t1 NODE_1617_length_10172_cov_44.7715 . mRNA 6743 9310 . + . ID=g1431.t1;Parent=g1431;Name=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 6743 6808 . + . ID=g1431.t1.exon1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 6743 6808 . + 0 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 6964 7000 . + . ID=g1431.t1.exon2;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 6964 7000 . + 0 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 7383 7507 . + . ID=g1431.t1.exon3;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 7383 7507 . + 2 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 7898 8062 . + . ID=g1431.t1.exon4;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 7898 8062 . + 0 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 8354 8487 . + . ID=g1431.t1.exon5;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 8354 8487 . + 0 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . exon 8785 9310 . + . ID=g1431.t1.exon6;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . CDS 8785 9262 . + 1 ID=cds.g1431.t1;Parent=g1431.t1 NODE_1617_length_10172_cov_44.7715 . three_prime_UTR 9263 9310 . + . ID=g1431.t1.utr3p1;Parent=g1431.t1 #PROT g1431.t1 g1431 MSASLRPYRIGQSATSTAVLKAIVFDSKGEPSWSEFLKTDLASQLHLQTRDLRMLEFRKQQSSIVVRPSVIIVNLGTLKVLIRAESVILCDPNNPEIQEFIYDLQDRLRAQDKSDLLPYEFKVLEEVHISVLHALSSKLYYDIRPAITNQLSALTEPDNPELDKRDLMRFLSESKRLAAFESRVEDIRQAIDEVLNNDEDMAGMYLSNNAATGVIRRTEQHEEVEMLLENYLKQVEEIAAEVAQLKSFIKMTEDIININLDSQRNTMMRLELKLTMGTVSVATCGLIAASFGMNLDNSLEGNPYAFPITTALLVVSTAAMYGMLLRMGRRRHLW* # PASA_UPDATE: g1430.t1, single gene model update, valid-1, status:[pasa:asmbl_2158,status:12],[pasa:asmbl_2160,status:12], valid-1 NODE_1617_length_10172_cov_44.7715 . gene 4192 5909 . - . ID=g1430;Name=g1430.t1 NODE_1617_length_10172_cov_44.7715 . mRNA 4192 5909 . - . ID=g1430.t1;Parent=g1430;Name=g1430.t1 NODE_1617_length_10172_cov_44.7715 . five_prime_UTR 5864 5909 . - . ID=g1430.t1.utr5p1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 5696 5909 . - . ID=g1430.t1.exon1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 5696 5863 . - 0 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 5537 5587 . - . ID=g1430.t1.exon2;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 5537 5587 . - 0 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 5344 5405 . - . ID=g1430.t1.exon3;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 5344 5405 . - 0 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 5026 5107 . - . ID=g1430.t1.exon4;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 5026 5107 . - 1 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 4855 4909 . - . ID=g1430.t1.exon5;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 4855 4909 . - 0 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . exon 4192 4535 . - . ID=g1430.t1.exon6;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . CDS 4348 4535 . - 2 ID=cds.g1430.t1;Parent=g1430.t1 NODE_1617_length_10172_cov_44.7715 . three_prime_UTR 4192 4347 . - . ID=g1430.t1.utr3p1;Parent=g1430.t1 #PROT g1430.t1 g1430 MSGLRASLWGAIVCIVSALVLAAAVAQGGDAPPFTTVTQDFNIKPDGQTTTAQVEKDGFTCKFQYAAFGGTNEDWAMTIETETASGTSVCRIERPKQASYLFFTSFKLTLDGRNLDFAEFFGNSAVALPADNFVVDGNEVSSTAAFKGELARVFALVKPSPPAAETQAEGKQDAPKNINSASKQRPKRKVAPTPGKRRQEL* # ORIGINAL: g1429.t1 original gene structure, not modified by PASA NODE_1617_length_10172_cov_44.7715 AUGUSTUS gene 230 3735 . - . ID=g1429;Name=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS mRNA 230 3735 . - . ID=g1429.t1;Parent=g1429;Name=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 3600 3735 . - . ID=g1429.t1.exon1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 3600 3735 . - 0 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 3244 3437 . - . ID=g1429.t1.exon2;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 3244 3437 . - 2 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 2765 2912 . - . ID=g1429.t1.exon3;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 2765 2912 . - 0 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 2369 2463 . - . ID=g1429.t1.exon4;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 2369 2463 . - 2 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 1905 2000 . - . ID=g1429.t1.exon5;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 1905 2000 . - 0 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 1557 1660 . - . ID=g1429.t1.exon6;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 1557 1660 . - 0 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 1233 1434 . - . ID=g1429.t1.exon7;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 1233 1434 . - 1 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 766 965 . - . ID=g1429.t1.exon8;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 766 965 . - 0 ID=cds.g1429.t1;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS exon 230 515 . - . ID=g1429.t1.exon9;Parent=g1429.t1 NODE_1617_length_10172_cov_44.7715 AUGUSTUS CDS 230 515 . - 1 ID=cds.g1429.t1;Parent=g1429.t1 #PROT g1429.t1 g1429 MARSRLSSAFACAFVALSLAFACADAAHRFDVYRMQQFDLDGERYGSREANVNLEGRLAESEDLSRKLAVTHMSGLTAEKLGSIVDEKKAGAVLIVLPKNTTDFPQSIKKEWASTEKQLLSREYAVPIYFAFEDEGLATIRDELTKQAPVTEADQKQSSVLSRLLNAGGHQFAVQLPTAARMGDLSGANIQGNLAGAGIVGADGKRLPTIAIIAHYDAFGVAPDLAFGGDDNASGAVAVLELARLFQRLYSSSRTHAKYNLLFVLAGAGSQNYEGVRQWVESTDTRVVDSIELAICIDSIGKGNGLTLHASRTAKEGTPLGSLAEELRRVSASPSIGSGASFAALQKKINLAEKEVAWGHEHLAKKKVAALTLSGHVSSDIAAPRKSVLDNGFVVDYSSLERNIRVIAEAVAAHIYGIGSENGTAAGESAAAESVEKETAANREIFAGSLAVDRHFVRAWFEYLARTPRSPQLLPGSSSSVVAALQS # ORIGINAL: g4490.t1 original gene structure, not modified by PASA NODE_3309_length_3777_cov_77.0978 AUGUSTUS gene 1758 3152 . + . ID=g4490;Name=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS mRNA 1758 3152 . + . ID=g4490.t1;Parent=g4490;Name=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS exon 1758 1812 . + . ID=g4490.t1.exon1;Parent=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS CDS 1758 1812 . + 0 ID=cds.g4490.t1;Parent=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS exon 2549 2660 . + . ID=g4490.t1.exon2;Parent=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS CDS 2549 2660 . + 2 ID=cds.g4490.t1;Parent=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS exon 3008 3152 . + . ID=g4490.t1.exon3;Parent=g4490.t1 NODE_3309_length_3777_cov_77.0978 AUGUSTUS CDS 3008 3152 . + 1 ID=cds.g4490.t1;Parent=g4490.t1 #PROT g4490.t1 g4490 MALLLARGRMALQRVALEVRRSYASAAKEAPEAAEKAHPVDPHEAHAASTMRLWKIISFAVGAPVVAYLTYRNFGPNAHHAHHEKAHYPFNDIRSKVCTYMCM* # PASA_UPDATE: g4489.t1, single gene model update, valid-1, status:[pasa:asmbl_5873,status:12], valid-1 NODE_3309_length_3777_cov_77.0978 . gene 70 1406 . + . ID=g4489;Name=g4489.t1 NODE_3309_length_3777_cov_77.0978 . mRNA 70 1406 . + . ID=g4489.t1;Parent=g4489;Name=g4489.t1 NODE_3309_length_3777_cov_77.0978 . exon 70 210 . + . ID=g4489.t1.exon1;Parent=g4489.t1 NODE_3309_length_3777_cov_77.0978 . CDS 70 210 . + 0 ID=cds.g4489.t1;Parent=g4489.t1;5_prime_partial=true NODE_3309_length_3777_cov_77.0978 . exon 555 722 . + . ID=g4489.t1.exon2;Parent=g4489.t1 NODE_3309_length_3777_cov_77.0978 . CDS 555 722 . + 0 ID=cds.g4489.t1;Parent=g4489.t1 NODE_3309_length_3777_cov_77.0978 . exon 941 1406 . + . ID=g4489.t1.exon3;Parent=g4489.t1 NODE_3309_length_3777_cov_77.0978 . CDS 941 1138 . + 0 ID=cds.g4489.t1;Parent=g4489.t1 NODE_3309_length_3777_cov_77.0978 . three_prime_UTR 1139 1406 . + . ID=g4489.t1.utr3p1;Parent=g4489.t1 #PROT g4489.t1 g4489 GKSSLTIQFVEGQFVDSYHPTIENTFQKLIRYKGQDYTADIVDTAGEDEFSILPSRYSVGIHGYVLVYSVTSRTSFEMVKIIREKLLNMTGTNSVPIVLVGNKTDLHLERVVSVEDGKNLATEWGCQFVESSAKHNQSVREIFEAIIFAIEKNAEPPTKKEDGGCAIL* # PASA_UPDATE: g2263.t1, single gene model update, valid-1, status:[pasa:asmbl_6206,status:12], valid-1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . gene 1 1961 . - . ID=g2263;Name=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . mRNA 1 1961 . - . ID=g2263.t1;Parent=g2263;Name=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 1804 1961 . - . ID=g2263.t1.exon1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 1804 1961 . - 0 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 1582 1675 . - . ID=g2263.t1.exon2;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 1582 1675 . - 1 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 1262 1396 . - . ID=g2263.t1.exon3;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 1262 1396 . - 0 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 916 993 . - . ID=g2263.t1.exon4;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 916 993 . - 0 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 671 714 . - . ID=g2263.t1.exon5;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 671 714 . - 0 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 334 440 . - . ID=g2263.t1.exon6;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 334 440 . - 1 ID=cds.g2263.t1;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . exon 1 221 . - . ID=g2263.t1.exon7;Parent=g2263.t1 NODE_3554_length_3219_cov_39.2805_potentialcontaminant . CDS 1 221 . - 2 ID=cds.g2263.t1;Parent=g2263.t1;3_prime_partial=true #PROT g2263.t1 g2263 MDTSNVDTRTVGRRTVSYTVSDSDGNTAQAFRSVIVTDADECSMPSEDPNAARCSTRATCTNTDGAFTCACYPGFSGDGVTCTDISPPVISVSGGVTPRRLEQYDAYAIPAATASDNSDETIKVSVVGVVNSTQVGTYVVSYSAVDSSGNRAGVQIAVHVHDLDECVMSRHDCNVDAVCTNTDGSFECTCSIGYEGSGHGPQGCVDRVSPTISLLGGAIVTLDQYADYVESGVVASDNRDGDVTSSVVTQGRVDSSAIGTYTLTYSVVDRAGNRASVNR # ORIGINAL: g10639.t1 original gene structure, not modified by PASA NODE_2371_length_6528_cov_49.0973 AUGUSTUS gene 1268 5252 . + . ID=g10639;Name=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS mRNA 1268 5252 . + . ID=g10639.t1;Parent=g10639;Name=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 1268 1393 . + . ID=g10639.t1.exon1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 1268 1393 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 1579 2496 . + . ID=g10639.t1.exon2;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 1579 2496 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 2696 2790 . + . ID=g10639.t1.exon3;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 2696 2790 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 3284 3455 . + . ID=g10639.t1.exon4;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 3284 3455 . + 1 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 3620 3725 . + . ID=g10639.t1.exon5;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 3620 3725 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 3904 4175 . + . ID=g10639.t1.exon6;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 3904 4175 . + 2 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 4384 4827 . + . ID=g10639.t1.exon7;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 4384 4827 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 5010 5252 . + . ID=g10639.t1.exon8;Parent=g10639.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 5010 5252 . + 0 ID=cds.g10639.t1;Parent=g10639.t1 #PROT g10639.t1 g10639 MDVAVVTQGLLATFAADDAALAANLAGIVASVESRRLLDGRLHATEASILAIQKWIKRINSLILSGDSASRWCGLNLLRSALRQCTPGVFAESSPAWMTAVLQILKRPAEPPRAHQCAVEVGGHILSIASLTPDQRRDMAAAHVPRFVAICIELAGSQSPTATRIASFSALAVCLDSFPGAMRPHFDSVEAICASSAFDQCASVRKAAVQTLAKAPLAAPLPANSGQSGDGSQQPQQPKDAHTGPQGTAWKAQMGSFVAYMHDVLTAAHATVPKQSGVAVSGRAKLSDRLNAASPVAPGSPAAPFQFETACDAATAMLLCDAPFAVSIPTADVLALAARTLSWDDRALGALRGGMLDVPGLLVARFHRAVIELVHALVLRRLRASAYACVALLTDTCGPSASVASVDEIVAAAVSDIRLTSDAASKSGEDASKNANRVRPGKRRKLEEASAPIATDGQTGTTGHLVTLEALRALPSVINGYSAGLPGPTRRLIEDALVTCAASIQPCIGLPSTIPAPYSLPQCRAALVTALASALLAFSTLNQTRVHAIFALISAETKDASLEVRAAAVDALLSLDAIVHPRLPVPRRHMAPESDGSSRDAPGGQSTDYNNAAGAGGGFGARGLGWSTMQPSADNYAPPKVDATGAPSDEPMEDADARVDVASGVPASTTRVGGALVSGVAATLPAVHAPRLDDAANPPFNVHSHADAAPKSAPSAMDVDPAHAHAPSQTLVASHTAPISATAATVVQPGTTRSHNTLPTSDRKRTVSDREEGNDDDEAMPEIVDCGPDDD* # PASA_UPDATE: g10638.t1, single gene model update, valid-1, status:[pasa:asmbl_4166,status:12], valid-1 NODE_2371_length_6528_cov_49.0973 . gene 58 810 . - . ID=g10638;Name=g10638.t1 NODE_2371_length_6528_cov_49.0973 . mRNA 58 810 . - . ID=g10638.t1;Parent=g10638;Name=g10638.t1 NODE_2371_length_6528_cov_49.0973 . five_prime_UTR 738 810 . - . ID=g10638.t1.utr5p1;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . exon 626 810 . - . ID=g10638.t1.exon1;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . CDS 626 737 . - 0 ID=cds.g10638.t1;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . exon 373 473 . - . ID=g10638.t1.exon2;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . CDS 373 473 . - 2 ID=cds.g10638.t1;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . exon 58 204 . - . ID=g10638.t1.exon3;Parent=g10638.t1 NODE_2371_length_6528_cov_49.0973 . CDS 58 204 . - 0 ID=cds.g10638.t1;Parent=g10638.t1;3_prime_partial=true #PROT g10638.t1 g10638 MAQRVWVVAVNSSTASSRAYEFLQALLKNSKYRDEVHAYHVYDASEQAALPASQRAEYIRKTYDQLGLEWKMKAAGTQHLKFQASIAEKKGRNVHQCISDIAKQLSANYIVVGSGRAERK # ORIGINAL: g10640.t1 original gene structure, not modified by PASA NODE_2371_length_6528_cov_49.0973 AUGUSTUS gene 5427 6088 . - . ID=g10640;Name=g10640.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS mRNA 5427 6088 . - . ID=g10640.t1;Parent=g10640;Name=g10640.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 5930 6088 . - . ID=g10640.t1.exon1;Parent=g10640.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 5930 6088 . - 0 ID=cds.g10640.t1;Parent=g10640.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS exon 5427 5711 . - . ID=g10640.t1.exon2;Parent=g10640.t1 NODE_2371_length_6528_cov_49.0973 AUGUSTUS CDS 5427 5711 . - 0 ID=cds.g10640.t1;Parent=g10640.t1 #PROT g10640.t1 g10640 DESYYRIPLGIQRYQPPEALFQPGILGVDQCGVVETLDYVLRRLHLEEPSVPTRYFATGGGSYFPGMRNRLWSDIRSVLPAGHVFEVHTAAHPFQSAWEGASKWASCGGGVRLAAGSISRADYDEKGHDYLTEHEASNMFTPVASTE* # ORIGINAL: g2822.t1 original gene structure, not modified by PASA NODE_4441_length_1613_cov_48.7068_potentialcontaminant AUGUSTUS gene 281 1597 . - . ID=g2822;Name=g2822.t1 NODE_4441_length_1613_cov_48.7068_potentialcontaminant AUGUSTUS mRNA 281 1597 . - . ID=g2822.t1;Parent=g2822;Name=g2822.t1 NODE_4441_length_1613_cov_48.7068_potentialcontaminant AUGUSTUS exon 281 1597 . - . ID=g2822.t1.exon1;Parent=g2822.t1 NODE_4441_length_1613_cov_48.7068_potentialcontaminant AUGUSTUS CDS 281 1597 . - 0 ID=cds.g2822.t1;Parent=g2822.t1 #PROT g2822.t1 g2822 MDKSVDYFESIGYVCPENFTPTDFYMVLLENEEIGPQLLAKWQEFLELNEVIVQSARSPMNVEPQASPDNITSRNEPADSEMPPIEERRAHTGEALTVKRVDTVDMASGDTFKYILGDETPLNVLPYPSTAHPHHNNATNDYLKRHLALSGSSHWIQTVELFKRAFIFVYTDYSYLAMMIISHLFFAVIVGVIFNNLTDNFTGMQDRVGLLFMCSTNICFSHSNFALNRFRSGKLLYIREQQVGAYSPFLYFIATFVADIPIIAFSILLQCIIVYFATGLYNSAGAFFYFFAVLNCCSLASFGLGAMVGAAFDNEFVATAAVPMLQIPMLMCGGLLADNDQVRPYFIWMEKISMHRYGALLLFHNEFRNLGELTCDAQKFGTVTCSLVPKRGSEVMAYLDFDDEQDAEWTMWLTMAVFIFLVRLGQLIALYVISRSKL* # PASA_UPDATE: g6127.t1, single gene model update, valid-1, status:[pasa:asmbl_3359,status:12], valid-1 NODE_2049_length_7924_cov_42.516 . gene 4838 7823 . + . ID=g6127;Name=g6127.t1 NODE_2049_length_7924_cov_42.516 . mRNA 4838 7823 . + . ID=g6127.t1;Parent=g6127;Name=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 4838 5342 . + . ID=g6127.t1.exon1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 4838 5342 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 5634 5719 . + . ID=g6127.t1.exon2;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 5634 5719 . + 2 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 6000 6236 . + . ID=g6127.t1.exon3;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 6000 6236 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 6364 6519 . + . ID=g6127.t1.exon4;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 6364 6519 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 6859 7017 . + . ID=g6127.t1.exon5;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 6859 7017 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 7124 7249 . + . ID=g6127.t1.exon6;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 7124 7249 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 7433 7564 . + . ID=g6127.t1.exon7;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 7433 7564 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . exon 7740 7823 . + . ID=g6127.t1.exon8;Parent=g6127.t1 NODE_2049_length_7924_cov_42.516 . CDS 7740 7823 . + 0 ID=cds.g6127.t1;Parent=g6127.t1 #PROT g6127.t1 g6127 MSVQAGDSAGSRTVVDPAPSTPQGTVVQTHSQQQVEVNPFAQEEPVTPLSAPEWRFLLEQSDRPRSASAGSDESSHKRNRSSSMSSASESAMTCTRKASLGTEGESPRPVLVDKSKCPEAQLHHMASASKLFGDDKKIAGAAEAVPVVETQAVLSRDNTTQHYGKIVVVLVGLPARGKTFISRKLTRYLMWLGVETKVFNVGNYRRQYVGAEMSHVFFDHNNPEGNELRRVVAEKALEDMIDWLKASGQVAVYDATNTSRDRRKVVYERCLAEGLQTFYIESICNDPAIVAANIQEVKITSPDYAKAKPEDAIADFLNRIQHYEKAYEPLDAKLDEELSFIKMIDVGRMFIVNRALGYLQSRIVYYLMNTHICPRSIYLTRHGESMYNLNGKIGGDSDLSPSGRRYADALEGFMKENGPKDLKVWTSTLKRARQTAAPFTWAPVMEWRALDEIDAGVCDGMTYEEIHELYPEEFARRDQNKFAYRYPRGEVSST* # ORIGINAL: g6126.t1 original gene structure, not modified by PASA NODE_2049_length_7924_cov_42.516 AUGUSTUS gene 762 3832 . + . ID=g6126;Name=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS mRNA 762 3832 . + . ID=g6126.t1;Parent=g6126;Name=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS exon 762 867 . + . ID=g6126.t1.exon1;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS CDS 762 867 . + 0 ID=cds.g6126.t1;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS exon 1215 2036 . + . ID=g6126.t1.exon2;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS CDS 1215 2036 . + 2 ID=cds.g6126.t1;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS exon 2227 2772 . + . ID=g6126.t1.exon3;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS CDS 2227 2772 . + 2 ID=cds.g6126.t1;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS exon 2865 2969 . + . ID=g6126.t1.exon4;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS CDS 2865 2969 . + 2 ID=cds.g6126.t1;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS exon 3336 3832 . + . ID=g6126.t1.exon5;Parent=g6126.t1 NODE_2049_length_7924_cov_42.516 AUGUSTUS CDS 3336 3832 . + 2 ID=cds.g6126.t1;Parent=g6126.t1 #PROT g6126.t1 g6126 MAQIARSSPFPATFALFVMCAFAAALPHCVQAALPEVLCDGSYDVVTQADANPLQQCTSITGTLRFTGTDMVEVTGFNSLRNVLRLQFVDNNRLTTIRGFGNLTRIGPDWSVATGNRLAEQCSYALYDGGSQALRIASNAILTAVTGFPVLRDVNGFLVISNNPFLTSLAGLVSLRTISCPFGSPGSRGALYVTDNQRLPNLDIFASVKELGYLYVQRNALLANLDGFRAVVTVYNELHVTENVALRNISGLNAIRSASMIEVRANPALCIDAVAVAAQFGTVASSVNVADNANFPDCKGQCEAVCDRVSSVYVGTCHPTCMTCKGPLATDCITCSLVASLTVNSTCVSLCQGAATATVTATRAPVTVTPSPCAQPTVFVTRTAAAATATATTTKTTTVTSTTTATQNVTLTSTRVSTATVTATATINITSTMTATQTTTMTATTTLTMTATATASVPYTVTVGQTAAVATPIGELPDLSTCSDTDPNVHLGLQFSLTVGKEVSRLKLRRSGDGTLQDWCPCSAVGDTDCILSNWTDWSGCSRACGGGAQDRNRTVITPSSGQGLPCGTLREVRACNSAACVDYNVTLATSTLSGAGTTASIYVQLNGTIGAIPQSLISTGLATNAVKSTLLTGLPNIGTLTSLTVMVNAATDTWRCVTITVVYARQTITFLCPSVYIGKPPVVMKPCTTC* # PASA_UPDATE: g6850.t1, single gene model update, valid-1, status:[pasa:asmbl_4064,status:12], valid-1 NODE_2336_length_6660_cov_38.6241 . gene 284 1364 . + . ID=g6850;Name=g6850.t1 NODE_2336_length_6660_cov_38.6241 . mRNA 284 1364 . + . ID=g6850.t1;Parent=g6850;Name=g6850.t1 NODE_2336_length_6660_cov_38.6241 . five_prime_UTR 284 285 . + . ID=g6850.t1.utr5p1;Parent=g6850.t1 NODE_2336_length_6660_cov_38.6241 . exon 284 1364 . + . ID=g6850.t1.exon1;Parent=g6850.t1 NODE_2336_length_6660_cov_38.6241 . CDS 286 1164 . + 0 ID=cds.g6850.t1;Parent=g6850.t1;5_prime_partial=true NODE_2336_length_6660_cov_38.6241 . three_prime_UTR 1165 1364 . + . ID=g6850.t1.utr3p1;Parent=g6850.t1 #PROT g6850.t1 g6850 VATISLRLLFGDSPFPFSVVLTLKGETVGSLVGAIHVTEKEDELRAQMSGRSRSIIPDTVPNPFAPDPKRPDDDGGAPLPNALERRAIGAKQRSHSLADVVTLGEMRQRGRQISGARAPTLSFVGDSADGLVIPGVGGDGPLSPRMGDGPVSPRLGDTAPQSGSFSQDDPFGGSARSEGSAIASVPPRSPRIQRQVSMDDLLLSSDAQTTPTPTLELRYGALDGPAGLVSECLCAHGLGELVRTFIGAGYDDRSVLVHVGEDDLDAMGVTETVMRAKVLEMVRKLKENESSV* # PASA_UPDATE: g6851.t1, single gene model update, valid-1, status:[pasa:asmbl_4065,status:3], valid-1 NODE_2336_length_6660_cov_38.6241 . gene 1644 6397 . - . ID=g6851;Name=g6851.t1 NODE_2336_length_6660_cov_38.6241 . mRNA 1644 6397 . - . ID=g6851.t1;Parent=g6851;Name=g6851.t1 NODE_2336_length_6660_cov_38.6241 . five_prime_UTR 6353 6397 . - . ID=g6851.t1.utr5p1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 6300 6397 . - . ID=g6851.t1.exon1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 6300 6352 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 5934 6057 . - . ID=g6851.t1.exon2;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 5934 6057 . - 1 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 5619 5708 . - . ID=g6851.t1.exon3;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 5619 5708 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 5282 5434 . - . ID=g6851.t1.exon4;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 5282 5434 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 4922 5104 . - . ID=g6851.t1.exon5;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 4922 5104 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 4590 4745 . - . ID=g6851.t1.exon6;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 4590 4745 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 4241 4354 . - . ID=g6851.t1.exon7;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 4241 4354 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 3476 3859 . - . ID=g6851.t1.exon8;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 3476 3859 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 2969 3205 . - . ID=g6851.t1.exon9;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 2969 3205 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 2364 2564 . - . ID=g6851.t1.exon10;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 2364 2564 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . exon 1644 2167 . - . ID=g6851.t1.exon11;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . CDS 1979 2167 . - 0 ID=cds.g6851.t1;Parent=g6851.t1 NODE_2336_length_6660_cov_38.6241 . three_prime_UTR 1644 1978 . - . ID=g6851.t1.utr3p1;Parent=g6851.t1 #PROT g6851.t1 g6851 MLSKCVASIARRGIAANSVRIVSASAQRNYASAAPSNGAPSSQSSFARGLFLGKLREEQVFPFPATNVLPQEAAEELKMLVEPCSKFFREVNNPALNDENAEIPEGTLQGLREMGAFGLQVPQDLGGLGLTNTGYARLVEVVGAHDLAVGIALGAHQSIGFKGILIAGNDAQKKKYLPKLASGEQFAAFALTEPSSGSDANSIRTRAVLSADGKHFVLNGSKIWISNGGIAEIFTVFAQTEVVDAKTGKKGDKVTAFIVERSFGGVTNGAPEKKMGIKCSNTAEVYFEDVKVPIENVIGDVGGGFKVAMNILNNGRFGMGAALTGTMKALIAKAADHANGRVQFGHKIREYGLIREKFAKMALRAYATESIAYTLSANMDRGSDDYQIEAAISKVYASESAWFVADEAIQILGGMGFMKHTGLERVMRDIRIFRIFEGTNEILRLFIALTGIQSAATSLRQLQKALASPLSNLGVIMDEAPKRLRRTLGVSGGGDVLRGVHPDLRSSASLIESRTADFGAAIESLLSKHGKDVINQQMPLRRVAEVVIDLYAMAAVTSRATHALNSKLPTAAHEALLCKTYCEDADERLASNIRALVSSKTCDQQFSQIAGDVLDKGEYIPTHPLGF* # ORIGINAL: g9951.t1 original gene structure, not modified by PASA NODE_2083_length_7824_cov_41.6485 AUGUSTUS gene 3354 5238 . - . ID=g9951;Name=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS mRNA 3354 5238 . - . ID=g9951.t1;Parent=g9951;Name=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 5143 5238 . - . ID=g9951.t1.exon1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 5143 5238 . - 0 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 4972 5026 . - . ID=g9951.t1.exon2;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 4972 5026 . - 0 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 4759 4860 . - . ID=g9951.t1.exon3;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 4759 4860 . - 2 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 4494 4621 . - . ID=g9951.t1.exon4;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 4494 4621 . - 2 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 4020 4209 . - . ID=g9951.t1.exon5;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 4020 4209 . - 0 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 3725 3870 . - . ID=g9951.t1.exon6;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 3725 3870 . - 2 ID=cds.g9951.t1;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 3354 3533 . - . ID=g9951.t1.exon7;Parent=g9951.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 3354 3533 . - 0 ID=cds.g9951.t1;Parent=g9951.t1 #PROT g9951.t1 g9951 MDSQLKNLLAWSTGQSSGNGDAPPNPASVASMDRELMEAVLGKDDITRMKDALAFLRSGNNDVEMTERSLDDLLFLVESIDNAKYLISLGGLPLLHSLLEHDRSTVRMGAAWILGTATHNNPDVQAQVLKLNILPKLLWILRHDADCDVRSKALSTVSALLGHNDEAQAEFVTMGGLEVFSECLSDNNAGDLVLQRKIVFMLGQFAQSNPLFTREILSHGVVSTVMRLLALDDADLNEKSLSFFLMLLGEDETPTAAVVAALSREGVPDAVASARQVKSGESAASFGELADELLRRMA* # ORIGINAL: g9952.t1 original gene structure, not modified by PASA NODE_2083_length_7824_cov_41.6485 AUGUSTUS gene 6449 7540 . + . ID=g9952;Name=g9952.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS mRNA 6449 7540 . + . ID=g9952.t1;Parent=g9952;Name=g9952.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 6449 6550 . + . ID=g9952.t1.exon1;Parent=g9952.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 6449 6550 . + 0 ID=cds.g9952.t1;Parent=g9952.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 6776 7540 . + . ID=g9952.t1.exon2;Parent=g9952.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 6776 7540 . + 0 ID=cds.g9952.t1;Parent=g9952.t1 #PROT g9952.t1 g9952 MGAYTSRPQNALQDVWRDEWHKTYRRLVEKLKLVEEEASSEGSPSWPALLHAARLGRVDDVASDIHYANYATQSGLTVFHIASLGASRVQNSHELLRLLFTGGARQQHRDCIVPIHLAAAIGDADVLRLFVEYRAVLPSGGGGFMSDVTPLHIACMYGHESLISLLIDAGLSPDASDARGFTPLHLAIYFGHDRCVRALLGRGASVNAQSIKGDTPLHVAAFEDRRGDVALLLGSEGIEVDARDKELHTPLHYGCRRGHIAVVEAMLAHRKGADPYSVNSYKDSPLHR* # ORIGINAL: g9950.t1 original gene structure, not modified by PASA NODE_2083_length_7824_cov_41.6485 AUGUSTUS gene 109 2732 . + . ID=g9950;Name=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS mRNA 109 2732 . + . ID=g9950.t1;Parent=g9950;Name=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 109 218 . + . ID=g9950.t1.exon1;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 109 218 . + 1 ID=cds.g9950.t1;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 707 809 . + . ID=g9950.t1.exon2;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 707 809 . + 2 ID=cds.g9950.t1;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 1063 1173 . + . ID=g9950.t1.exon3;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 1063 1173 . + 1 ID=cds.g9950.t1;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 1672 2112 . + . ID=g9950.t1.exon4;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 1672 2112 . + 1 ID=cds.g9950.t1;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS exon 2444 2732 . + . ID=g9950.t1.exon5;Parent=g9950.t1 NODE_2083_length_7824_cov_41.6485 AUGUSTUS CDS 2444 2732 . + 1 ID=cds.g9950.t1;Parent=g9950.t1 #PROT g9950.t1 g9950 AAHAPGRVQRNGDFQERNGFKPAVVIDVEVWGKAAISEYFWSRIIGAPPAESKSKGLWFYGEAFVGKYRLRYRTGPGFQQHKVPTDAQNVILILNGRAPDKVQYARGWNVGVILHGSEDCHNPWLIDEYLPRLRFAAIIYGEATVEMTATSKVFQWPLGVASYRGFPRDIRTHDAQTPARPKLCNMISTVYPGSSREGLAAQLDKSLLAKERCIIRNRHNWAIKDTADESKHYLQALVTTDYTLSPAGMNTECYRIWEAIECGSIPVIEDVRSEDCPRPMALLHDTAAPMVFVPNWDDAHGLLSRLNSAGFLQTSKDRAKMADWYTEFKAKMRQRLVRAMDDFFELPNVV* # PASA_UPDATE: g14172.t1, single gene model update, valid-1, status:[pasa:asmbl_3183,status:12], valid-1 NODE_1999_length_8164_cov_39.3752 . gene 152 2996 . + . ID=g14172;Name=g14172.t1 NODE_1999_length_8164_cov_39.3752 . mRNA 152 2996 . + . ID=g14172.t1;Parent=g14172;Name=g14172.t1 NODE_1999_length_8164_cov_39.3752 . five_prime_UTR 152 160 . + . ID=g14172.t1.utr5p1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 152 332 . + . ID=g14172.t1.exon1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 161 332 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 472 575 . + . ID=g14172.t1.exon2;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 472 575 . + 2 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 809 952 . + . ID=g14172.t1.exon3;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 809 952 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 1355 1489 . + . ID=g14172.t1.exon4;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 1355 1489 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 1715 1768 . + . ID=g14172.t1.exon5;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 1715 1768 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 2058 2201 . + . ID=g14172.t1.exon6;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 2058 2201 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 2464 2614 . + . ID=g14172.t1.exon7;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 2464 2614 . + 0 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . exon 2827 2996 . + . ID=g14172.t1.exon8;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . CDS 2827 2978 . + 2 ID=cds.g14172.t1;Parent=g14172.t1 NODE_1999_length_8164_cov_39.3752 . three_prime_UTR 2979 2996 . + . ID=g14172.t1.utr3p1;Parent=g14172.t1 #PROT g14172.t1 g14172 MGRTFHNRHRISYSILRFSAPKAVCVVSTYKWILIIVALFFRSQSRAHSVQPKMGGGGENKKIDSSALKALVTGSAVVGEMVFGGLFMENVKMEKQRTSLPYPTIMSRILKQGIRGFEAGLVPWGLLLGATKGAVLGGSKSEITYWCHRAGMSKENTALFSGFAAGAVQGVFMSPILLARTRVNQSVTERSARGVTEGSIWQEVRLSTRILSDAVRNEGVMVLTSGMGTCVIKRAMDWGTRFIFLEYFRKTLQATKKPGETLTDAEKLLTSFFGGAVSVVVTMPIDRLMPVLQAASGGKGDSIATIVRNKLAAEGAGTLFRGLAMRTMHTGYHTMFATFVAEKLYDLAVGK* # PASA_UPDATE: g14173.t1, single gene model update, valid-1, status:[pasa:asmbl_3184,status:3], valid-1 NODE_1999_length_8164_cov_39.3752 . gene 3297 5150 . - . ID=g14173;Name=g14173.t1 NODE_1999_length_8164_cov_39.3752 . mRNA 3297 5150 . - . ID=g14173.t1;Parent=g14173;Name=g14173.t1 NODE_1999_length_8164_cov_39.3752 . five_prime_UTR 4839 5150 . - . ID=g14173.t1.utr5p1;Parent=g14173.t1 NODE_1999_length_8164_cov_39.3752 . exon 4047 5150 . - . ID=g14173.t1.exon1;Parent=g14173.t1 NODE_1999_length_8164_cov_39.3752 . CDS 4047 4838 . - 0 ID=cds.g14173.t1;Parent=g14173.t1 NODE_1999_length_8164_cov_39.3752 . exon 3297 3664 . - . ID=g14173.t1.exon2;Parent=g14173.t1 NODE_1999_length_8164_cov_39.3752 . CDS 3380 3664 . - 0 ID=cds.g14173.t1;Parent=g14173.t1 NODE_1999_length_8164_cov_39.3752 . three_prime_UTR 3297 3379 . - . ID=g14173.t1.utr3p1;Parent=g14173.t1 #PROT g14173.t1 g14173 MQGPRPSTVTTSATARRLPSIGDWLTSISKREDAEWPALYPHQQGVSVGRAVPVRDSGTPGTRSGSGALTSVATKLPAVVQADTRTTVHVQRPSTSVCIRERTKGDEGTDAEKQLPPSTIYSGVGKPESTTGKSQSDKVTVRRRTRRSIGGNCSVDSFDRRNEPLIASNDQLVFGTPTSLSVSGRSSYSSLKSHSARNAQSADTKMLNVVEELVREQQQIQLLFSHFRNSRRHSERMALVNDLVEACRDYFYVLENVFHKELDKVDHELACECREAFNAALPDAVILITMVDPIVSPKEFVQSVSDLSRTLSKHFEEYGEMAFPRLRQCCRLEDLHSLGIKVRQQKMRLQATRRRTLQ* # PASA_UPDATE: g14174.t1, single gene model update, valid-1, status:[pasa:asmbl_3185,status:12], valid-1 NODE_1999_length_8164_cov_39.3752 . gene 6249 7926 . - . ID=g14174;Name=g14174.t1 NODE_1999_length_8164_cov_39.3752 . mRNA 6249 7926 . - . ID=g14174.t1;Parent=g14174;Name=g14174.t1 NODE_1999_length_8164_cov_39.3752 . exon 7752 7926 . - . ID=g14174.t1.exon1;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . CDS 7752 7926 . - 0 ID=cds.g14174.t1;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . exon 7154 7240 . - . ID=g14174.t1.exon2;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . CDS 7154 7240 . - 2 ID=cds.g14174.t1;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . exon 6249 6702 . - . ID=g14174.t1.exon3;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . CDS 6632 6702 . - 2 ID=cds.g14174.t1;Parent=g14174.t1 NODE_1999_length_8164_cov_39.3752 . three_prime_UTR 6249 6631 . - . ID=g14174.t1.utr3p1;Parent=g14174.t1 #PROT g14174.t1 g14174 MQIQRENRPIFLAFVLLILAGLAYFAFKVYRFHTKSCPICEKEIQAGNAKSFTFLGLFSGINFALLFFTLCVAILCYRNFGKGLVEYVGPQRKKAGSETNTSSRTMNLVI* # ORIGINAL: g3120.t1 original gene structure, not modified by PASA NODE_15620_length_239_cov_31.1585_potentialcontaminant AUGUSTUS gene 2 239 . + . ID=g3120;Name=g3120.t1 NODE_15620_length_239_cov_31.1585_potentialcontaminant AUGUSTUS mRNA 2 239 . + . ID=g3120.t1;Parent=g3120;Name=g3120.t1 NODE_15620_length_239_cov_31.1585_potentialcontaminant AUGUSTUS exon 2 239 . + . ID=g3120.t1.exon1;Parent=g3120.t1 NODE_15620_length_239_cov_31.1585_potentialcontaminant AUGUSTUS CDS 2 239 . + 2 ID=cds.g3120.t1;Parent=g3120.t1 #PROT g3120.t1 g3120 QSIDNWLETRTFLVGERQTIADINLAFSLQAFYRGLDVSETLSKKFKDVWRLYNTVMQQPQTVEVLKSVGGSFGLVAK # ORIGINAL: g5391.t1 original gene structure, not modified by PASA NODE_3216_length_3996_cov_39.5914 AUGUSTUS gene 2421 3963 . - . ID=g5391;Name=g5391.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS mRNA 2421 3963 . - . ID=g5391.t1;Parent=g5391;Name=g5391.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS exon 3936 3963 . - . ID=g5391.t1.exon1;Parent=g5391.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS CDS 3936 3963 . - 0 ID=cds.g5391.t1;Parent=g5391.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS exon 2421 3691 . - . ID=g5391.t1.exon2;Parent=g5391.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS CDS 2421 3691 . - 2 ID=cds.g5391.t1;Parent=g5391.t1 #PROT g5391.t1 g5391 MSCGFKCAHADSVSKGLIDDNLPANVPSHVHRSRKPTGNNVADNPKNDARDAFFRLPFASVADALATALPQCNIPLSYPRPAYIERYGGVRMVVESVVYPKDGTAMLKGDKFESENGVMTDSDAQRVVSEYVTAVNTRLGESNRSLLQLVSIVNVVQKRHAVGENPGFRFLVELEVRQDGNDKLQRVSQYVYLPDGARSNEQYGGSRLCASPDFAWNPHAKVHIVIAVKNQGAWVRHLVEDVQQLLFETGDRNFRLVLVDFNSADIDVEAHLAASQLPRDMWHVVKRTGSFERAGGIQSGVDAVTSPDDIVFLCDLHLEMPRTIIENVRRYTVRGRKVYAPAVVRLACGHTPDSPNGFWEMGGYGLLALYKADYDRIGGMNTNEYKSKWGGEDWEFMDRVFTSGFEVERLRLAKFYHFFHSQRGMWTAAGRR* # ORIGINAL: g5390.t1 original gene structure, not modified by PASA NODE_3216_length_3996_cov_39.5914 AUGUSTUS gene 149 1603 . + . ID=g5390;Name=g5390.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS mRNA 149 1603 . + . ID=g5390.t1;Parent=g5390;Name=g5390.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS exon 149 1603 . + . ID=g5390.t1.exon1;Parent=g5390.t1 NODE_3216_length_3996_cov_39.5914 AUGUSTUS CDS 149 1603 . + 0 ID=cds.g5390.t1;Parent=g5390.t1 #PROT g5390.t1 g5390 MAASVRFICSACSKITAPNLAPYACTVCSFPLDLHKPTPPLFPKDDILKRPPSMWRYREAIPIDGDPVTLGEGMTPLIPISIPLDSLIVKTGPEDSNNNNNTNSTDCIARESINVHMKLESVMPTGSYKDRGASALVTWIRAVSRSPAHAHSTLIAVEDSSGNAGASVSTYCARAGIQCDIYTPSSASAGKRAQIAMSGAILHGIPGPRAEATAAALKVVAAASPQETSCLDNVEITARTNAKKASGNAAVRECGDECSGSGDSSASSSVGSASDDATSRVVRFYASHNWNPFFMEGVKTASFELWEQLGFTAPDAVVCPCGFGGLYIALHIGFTELRQAGCIDKLPRIYGIQAENCSPVARAFDAGSALVDDDTPVVPTVAEGIACARPIRGASLLAAVKTNGGAIVSVPETSIFPSLCELARLGVYGEPTSAVVVEGVRVLHRRGLIRSGETVVGIITGSGLKATDKIVTWTQAQEQQAQSA* # PASA_UPDATE: g4735.t1, single gene model update, valid-1, status:[pasa:asmbl_7275,status:12], valid-1 NODE_4394_length_1671_cov_148.259 . gene 196 1613 . + . ID=g4735;Name=g4735.t1 NODE_4394_length_1671_cov_148.259 . mRNA 196 1613 . + . ID=g4735.t1;Parent=g4735;Name=g4735.t1 NODE_4394_length_1671_cov_148.259 . five_prime_UTR 196 229 . + . ID=g4735.t1.utr5p1;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . exon 196 418 . + . ID=g4735.t1.exon1;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . CDS 230 418 . + 0 ID=cds.g4735.t1;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . exon 963 1094 . + . ID=g4735.t1.exon2;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . CDS 963 1094 . + 0 ID=cds.g4735.t1;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . exon 1570 1613 . + . ID=g4735.t1.exon3;Parent=g4735.t1 NODE_4394_length_1671_cov_148.259 . CDS 1570 1613 . + 0 ID=cds.g4735.t1;Parent=g4735.t1;3_prime_partial=true #PROT g4735.t1 g4735 MPPKKVVQEERPLLGRVGTNLRMGIVGLPNVGKSTFFNVLTNSSAAAENFPFCTIDPNESRCAVPDERFDWLCEHHKPASKVPAYLQITDIAGLVKGASEGQGLGNAFLSHIRAVDGIFHV # ORIGINAL: g5574.t1 original gene structure, not modified by PASA NODE_2286_length_6857_cov_38.2081 AUGUSTUS gene 170 3070 . - . ID=g5574;Name=g5574.t1 NODE_2286_length_6857_cov_38.2081 AUGUSTUS mRNA 170 3070 . - . ID=g5574.t1;Parent=g5574;Name=g5574.t1 NODE_2286_length_6857_cov_38.2081 AUGUSTUS exon 170 3070 . - . ID=g5574.t1.exon1;Parent=g5574.t1 NODE_2286_length_6857_cov_38.2081 AUGUSTUS CDS 170 3070 . - 0 ID=cds.g5574.t1;Parent=g5574.t1 #PROT g5574.t1 g5574 MDPFGLDPFAPTHTPASKVVHSPAASSSADPFGFDLDPFAPLPSVNASGNHGRDSLASFASSARPSLSSSAAASGFGGSGSLLDLDPLGGFGGASAQTTHAPIAPRDSVHSAYGTARSSLSSSHTSAHGYFDDLVSMPHIPAPTAHPAHPHSHSEDHSHAQPHDTLHFDNAHHTSTPATTSATPRASAVAVELFGMDDFASSFSSSSEAGSQRHDSVAHVSATHAAPLNPFGDAFSVGVTPASPLPPPQATASFPAFANHDHIVSASASVTAPVLASTSGSHLSPRPPRTAAASHPAFDEDIAHISTPDGGLSQLSDTTMEQFASKFPMDVDLAGAMSPMDFPASASASAAGTPLAGHSRQTSSADHLHDPPSQGHHGPHAHGLLEDLHRKHLEQALSTPTLTHAYDAHDIPSSTSSYEGGSIVDMLSMGGIGGGEHHVTESVHPSLHTSNPFSVDDEEYTGANAQETARAETETPADLTTHINNAVFDDVDDGSGDITAVAEPANAYVVPVNAPLETDVRVSEVEDASPDVDEGAVVQSFEQAFPETVSVSDDVSLEATPVAPIEATADAFASFEATPVAPIEATADAFASFEATPVAPIEATADAFASFEATPVAPIEATADAFASFEATPVAPIEATTDAFASFEATPVAHIEATTDAFASFEATPVAPVEATADAFASFEATPVAPVETTDAFASFEATPIAPVETTDAFASFVATPVAPIEATADAFASFEATPVAPIEATADAFASFDAPVAPVEATTDAFAPFEATPVAPVEATTDAFTPFEAPPVAPVEATTDAFTSFEVMPVAPVETTDAFASFEATPVAPIEATTDAFASFEATPVAPIEATTDAFAPFKATPLAPVEATTDAFASFEVTPVAPVEATDAFASFEATPVAPIEATTDGLTSFEATPSADPPLNLHAVADAAVETVPIPADIPSTSAAPHVSAFMPIAASSDAALRK* # PASA_UPDATE: g5575.t1, single gene model update, valid-1, status:[pasa:asmbl_3942,status:12], valid-1 NODE_2286_length_6857_cov_38.2081 . gene 3891 6690 . - . ID=g5575;Name=g5575.t1 NODE_2286_length_6857_cov_38.2081 . mRNA 3891 6690 . - . ID=g5575.t1;Parent=g5575;Name=g5575.t1 NODE_2286_length_6857_cov_38.2081 . five_prime_UTR 6646 6690 . - . ID=g5575.t1.utr5p1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . five_prime_UTR 6456 6508 . - . ID=g5575.t1.utr5p2;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 6646 6690 . - . ID=g5575.t1.exon1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 6395 6508 . - . ID=g5575.t1.exon2;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 6395 6455 . - 0 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 5707 5859 . - . ID=g5575.t1.exon3;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 5707 5859 . - 2 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 5428 5470 . - . ID=g5575.t1.exon4;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 5428 5470 . - 2 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 5122 5207 . - . ID=g5575.t1.exon5;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 5122 5207 . - 1 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 4853 4970 . - . ID=g5575.t1.exon6;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 4853 4970 . - 2 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 4536 4606 . - . ID=g5575.t1.exon7;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 4536 4606 . - 1 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 4266 4398 . - . ID=g5575.t1.exon8;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 4266 4398 . - 2 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . exon 3891 4043 . - . ID=g5575.t1.exon9;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . CDS 3935 4043 . - 1 ID=cds.g5575.t1;Parent=g5575.t1 NODE_2286_length_6857_cov_38.2081 . three_prime_UTR 3891 3934 . - . ID=g5575.t1.utr3p1;Parent=g5575.t1 #PROT g5575.t1 g5575 MVTGGSLSESREALALAAQYPSLYATVGCHPTRSLEFEDATKANGPDDYYEQLLQTLRSSDKIVAVGECGLDYDRLEFCPRDAQLKYFERQFELAEATQLPMFLHSRGTNGEFNQIVKQNRSRFTTGVVHSFDGSKEEAAEIVAMGLYIGINGCSLKTVQNLDVVATIPADRLMIETDAPWCDVRPTHAGNKFVKTRVADKKKERFERGVPVKGRNEPANIRQVLEVMAGARGEDPDILAEAMYQNSMRVFFSNLTR* # ORIGINAL: g10013.t1 original gene structure, not modified by PASA NODE_1110_length_13891_cov_39.9922 AUGUSTUS gene 34 1801 . - . ID=g10013;Name=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS mRNA 34 1801 . - . ID=g10013.t1;Parent=g10013;Name=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 1706 1801 . - . ID=g10013.t1.exon1;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 1706 1801 . - 0 ID=cds.g10013.t1;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 1475 1596 . - . ID=g10013.t1.exon2;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 1475 1596 . - 0 ID=cds.g10013.t1;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 917 1002 . - . ID=g10013.t1.exon3;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 917 1002 . - 1 ID=cds.g10013.t1;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 413 546 . - . ID=g10013.t1.exon4;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 413 546 . - 2 ID=cds.g10013.t1;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 34 222 . - . ID=g10013.t1.exon5;Parent=g10013.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 34 222 . - 0 ID=cds.g10013.t1;Parent=g10013.t1 #PROT g10013.t1 g10013 MRLLALFGVGAVIMRGAGCTINDMWDKDYDKMVERTKTRPLASGEITTRQSFVFLTGQLAAGLGVLVNLNPYSIAFGASSLALVAAYPLMKRVTYWPQAFLGLTFNFGIPLGWAAVHASMDPLVILPAYIAGISWTLVYDTIYAHQDKKDDALVGVKSTALRFGDNTRPWLSLFAVSTIGGLALSGANAGLAWPFYASLAAGAAHLAWQ # ORIGINAL: g10015.t1 original gene structure, not modified by PASA NODE_1110_length_13891_cov_39.9922 AUGUSTUS gene 7895 12857 . + . ID=g10015;Name=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS mRNA 7895 12857 . + . ID=g10015.t1;Parent=g10015;Name=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 7895 8329 . + . ID=g10015.t1.exon1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 7895 8329 . + 0 ID=cds.g10015.t1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 8608 9622 . + . ID=g10015.t1.exon2;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 8608 9622 . + 0 ID=cds.g10015.t1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 9915 10369 . + . ID=g10015.t1.exon3;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 9915 10369 . + 2 ID=cds.g10015.t1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 10654 10836 . + . ID=g10015.t1.exon4;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 10654 10836 . + 0 ID=cds.g10015.t1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 11177 12419 . + . ID=g10015.t1.exon5;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 11177 12419 . + 0 ID=cds.g10015.t1;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS exon 12679 12857 . + . ID=g10015.t1.exon6;Parent=g10015.t1 NODE_1110_length_13891_cov_39.9922 AUGUSTUS CDS 12679 12857 . + 2 ID=cds.g10015.t1;Parent=g10015.t1 #PROT g10015.t1 g10015 MGPSRPRFTMRALVFSLLVVAMADHAWCVTAPANVTLGGLFPKSFPDGSPRSAGLQRAVAMRLAVEDINNSTLVLPDTVVIGLIRDSRGDPKFALGETLSLVDQKVVGVVGDASSVISQTVQFFLRLVNKPQVSYASTSAALSNKDLYDYFLRVVPSDAFQGLAMASLVKKLNATRVATISSDDVYGASGMNVFLSAAATLNIPILTSQIISSGSSDVSLQMTALQSSDANVIVIFMNDPEIQKIWSRVAQYNLTADRVLWVCSDAITQSSVIGSNTNVLRGLLGFNPKRPSGPRLDTFMNAWNTRSEYASDAMNNIVPFVYDAVWSFAYAMDTMIKAGKDPSDGPTLLKTLLNTTFDGVTGKISFDKNGDPPGRYSIIHLRNGTLYEVGEWNETAGATLQFDRIVWPGPNASSFTSRLCEPPCEHGICATRDRCVCANGWNGPTCATAICGNACVHGNCTSPDTCTCSTGYKGPTCAQLTFEVPIPPSVVYAEDITGSSLSVLWVAGREGSSPITSFELQMSTDGGASFHSVFAGNVTGHTLTGLASGAEYMFRVRATNGEGTGLFSPILRVSTLGGSGSSKSIVIIVAVVIPVVCVIAACIAIGTWWHYRKKRRVMDMKTRGPKFDLDTPLQKVVADLSKVASSRLMDRKMRHVIKNAVDVIMSGNYFKPENVTEDMRKQCGNEAAAFVNELLQVRNPITQNLSVTSIGSLSRGGMGMLRRASLGSASKYSVKDAPIETPAEKRDREEHILAELDIINFESFSQWSFDPFALEAKTKNRPLFYAIRHVFRSLGIQAHFSIADDVICGFASAMEAGYHADNPYHNSTHAADVVHAMSVFLSQPNVAELVTMEELFACVVASAMHDLGHPGLTNSFLMATLDPLAVMYNDRSVLENHHCASGFKLIMSSDSTNVFSNLVPESFQKIRRLCCMLVLATDMANHFELLTKFKMWKTQYDIVRRAVMASSSVGTASQNARLNIASPNVNRSIGSVRSDFSTSNLSHSGSIGSGNSTTVAMANATMGDVTPMLSLAIKAADISNPTKPFGIYSQWCGRIEEEFYRQGDQERARGMPMSMFMDRLNPATAKCQNGFISVIVKPLYEHWSRFTGHEEPMLLLEENHSRWLDQLGASHVPTVTVNVVSAPRFGPNTHSLRPTISMLSQTSEVSQKA* # PASA_UPDATE: g10014.t1, single gene model update, valid-1, status:[pasa:asmbl_425,status:12], valid-1 NODE_1110_length_13891_cov_39.9922 . gene 2688 6568 . + . ID=g10014;Name=g10014.t1 NODE_1110_length_13891_cov_39.9922 . mRNA 2688 6568 . + . ID=g10014.t1;Parent=g10014;Name=g10014.t1 NODE_1110_length_13891_cov_39.9922 . five_prime_UTR 2688 2730 . + . ID=g10014.t1.utr5p1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 2688 3520 . + . ID=g10014.t1.exon1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 2731 3520 . + 0 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 3613 3773 . + . ID=g10014.t1.exon2;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 3613 3773 . + 2 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 3931 4103 . + . ID=g10014.t1.exon3;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 3931 4103 . + 0 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 4219 4451 . + . ID=g10014.t1.exon4;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 4219 4451 . + 1 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 5630 5866 . + . ID=g10014.t1.exon5;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 5630 5866 . + 2 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . exon 6099 6568 . + . ID=g10014.t1.exon6;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . CDS 6099 6496 . + 2 ID=cds.g10014.t1;Parent=g10014.t1 NODE_1110_length_13891_cov_39.9922 . three_prime_UTR 6497 6568 . + . ID=g10014.t1.utr3p1;Parent=g10014.t1 #PROT g10014.t1 g10014 MSSYSSRDRDHDRDRDRDRGSDRDRDRDRERDYGSSKYGSSSGGYGSSSHGSYGGGGGYGGGGSYGGGGGGGGGGFGGGNRGSIQTNMSKPNWDLNTLPKFEKNFYLEHPAVTAWSSADVEEYRRRREITVRGKSTPKPVRSFEEASFPEYVQEVIRIEGFKEPTAIQAQGWPMALSGRDMVGIAETGSGKTLSYILPAILHINAQPFLERGDGPIVLILAPTRELACQILEVAQKFGASSRIKSTCVYGGVPKGPQIRDLERGVEICIATPGRLIDMLSMGKTNLRRCTYLVLDEADRMLDMGFEPQLRQIVDQIRPDRQTLMWSATWPKEVQRLAEDYLKEYIQVNIGSLSLSANRKITQIVDVISSGEKDSKLMRLIERIMSEKDNKTIIFADTKRNVDELTRRLRRDGWPAMCIHGDKQQQERDLVLAEFKTGRAPILIATDVASRGLDVKDIRFVINYDFPNNTEDYVHRIGRTARAGLEGTAYTLFTIENASKARDLVAVLTEANQEVNPRLLEMANIRGGASAGGRSRYGSGRGGGGGGGGYGSQRSGANAEPLSNPRGGSSYSSGGTTGGSTGGGYYGGSSYSSSNGATSYGGASSYSAPASYTAPSTYSTGASAYTAAPAAAYSAPAAYGASSTGATAQYGSTYSSAPSYYGAR* # PASA_UPDATE: g12396.t1, single gene model update, valid-1, status:[pasa:asmbl_1931,status:12], valid-1 NODE_1549_length_10522_cov_39.827 . gene 277 685 . + . ID=g12396;Name=g12396.t1 NODE_1549_length_10522_cov_39.827 . mRNA 277 685 . + . ID=g12396.t1;Parent=g12396;Name=g12396.t1 NODE_1549_length_10522_cov_39.827 . five_prime_UTR 277 277 . + . ID=g12396.t1.utr5p1;Parent=g12396.t1 NODE_1549_length_10522_cov_39.827 . exon 277 685 . + . ID=g12396.t1.exon1;Parent=g12396.t1 NODE_1549_length_10522_cov_39.827 . CDS 278 454 . + 0 ID=cds.g12396.t1;Parent=g12396.t1;5_prime_partial=true NODE_1549_length_10522_cov_39.827 . three_prime_UTR 455 685 . + . ID=g12396.t1.utr3p1;Parent=g12396.t1 #PROT g12396.t1 g12396 RSFEDALSANAAVGGDSCARGQVIGTLLGAYKGTAGIPQRWIAGLRAGAAIEAALSSL* # ORIGINAL: g12398.t1 original gene structure, not modified by PASA NODE_1549_length_10522_cov_39.827 AUGUSTUS gene 6395 9820 . + . ID=g12398;Name=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS mRNA 6395 9820 . + . ID=g12398.t1;Parent=g12398;Name=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 6395 6455 . + . ID=g12398.t1.exon1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 6395 6455 . + 0 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 6623 6746 . + . ID=g12398.t1.exon2;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 6623 6746 . + 2 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 6849 6922 . + . ID=g12398.t1.exon3;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 6849 6922 . + 1 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 7096 7341 . + . ID=g12398.t1.exon4;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 7096 7341 . + 2 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 7605 7735 . + . ID=g12398.t1.exon5;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 7605 7735 . + 2 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 7890 8043 . + . ID=g12398.t1.exon6;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 7890 8043 . + 0 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 8383 8519 . + . ID=g12398.t1.exon7;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 8383 8519 . + 2 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 8840 8917 . + . ID=g12398.t1.exon8;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 8840 8917 . + 0 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 9150 9382 . + . ID=g12398.t1.exon9;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 9150 9382 . + 0 ID=cds.g12398.t1;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS exon 9613 9820 . + . ID=g12398.t1.exon10;Parent=g12398.t1 NODE_1549_length_10522_cov_39.827 AUGUSTUS CDS 9613 9820 . + 1 ID=cds.g12398.t1;Parent=g12398.t1 #PROT g12398.t1 g12398 MAHQGGAGVGSEVDALFKSDDTLERFLDPYFDSTGFTDAMIRAFAVQDTLKKLRVGIECLDRELQSQVYSRHDDLLQQATSIQRLEGVIEMVRGRVESIQAAVDRIRSRVSEPYAIIEARTMQLARLQGACDVLRRVIRFLYLSRRLKGQMEGGAREAAKSAQTLSEIDSLLAEANISGVHTVDREMKWIDSARLQIDTEAAEMLVRGMETQNQPEVATSLQVFYNLGILQQRVRLTIDGIESSLRKSISTAFSLAGLQIEAPTSGTMGGPGGARSSTQPPAGNSAAWRAALWTRIEKLMDAVYAAAVQVHHLQRVLAKKRDPVTHAGFLDEIVKPGDPAISTVFWDHATASLHEEMSRAADASPFFRQAFEGEFPKVLRLFGELWHRVGPFIVGGGAGHSHVEGPGKGQEESHERASLRTALRPFENGYLTRSLSRLFDPVNLVFPSGSKSPPTADEVANIAKAMARSAFYHYVMNFYHF* # PASA_UPDATE: g12397.t1, single gene model update, valid-1, status:[pasa:asmbl_1930,status:3], valid-1 NODE_1549_length_10522_cov_39.827 . gene 1098 5806 . - . ID=g12397;Name=g12397.t1 NODE_1549_length_10522_cov_39.827 . mRNA 1098 5806 . - . ID=g12397.t1;Parent=g12397;Name=g12397.t1 NODE_1549_length_10522_cov_39.827 . five_prime_UTR 5516 5806 . - . ID=g12397.t1.utr5p1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 5437 5806 . - . ID=g12397.t1.exon1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 5437 5515 . - 0 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 5107 5191 . - . ID=g12397.t1.exon2;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 5107 5191 . - 2 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 4805 4849 . - . ID=g12397.t1.exon3;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 4805 4849 . - 1 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 4661 4704 . - . ID=g12397.t1.exon4;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 4661 4704 . - 1 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 4290 4377 . - . ID=g12397.t1.exon5;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 4290 4377 . - 2 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 3815 3965 . - . ID=g12397.t1.exon6;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 3815 3965 . - 1 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 3375 3516 . - . ID=g12397.t1.exon7;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 3375 3516 . - 0 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 2992 3050 . - . ID=g12397.t1.exon8;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 2992 3050 . - 2 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 2610 2711 . - . ID=g12397.t1.exon9;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 2610 2711 . - 0 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 2202 2306 . - . ID=g12397.t1.exon10;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 2202 2306 . - 0 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . exon 1098 1960 . - . ID=g12397.t1.exon11;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . CDS 1748 1960 . - 0 ID=cds.g12397.t1;Parent=g12397.t1 NODE_1549_length_10522_cov_39.827 . three_prime_UTR 1098 1747 . - . ID=g12397.t1.utr3p1;Parent=g12397.t1 #PROT g12397.t1 g12397 MTQFMKKMVSKKKRRFNVDGFDLDLTYITDRIIAMGFPSEKVEGLYRNHIDEVVRFFDSRHKDHYKVYNLCSERCYDASKFHGRVAVFPFDDHNAPPFELIQPFCEDVEKWMKEDDRNVVVIHCKAGKGRTGVMIAAFLLHCKMWDKTEDALQYYGAARTQNAKGVTIPSQQRYVAYYGRLIRENLTYAPVALCIDAIKLYTVPNVSNGTCAPVFVIRQGESKLYVSKAVENVRKEQPVIEMPCEKHIQVAGDVKVEVYHKGFKKEKMFHFWFNTFFATDNKITLSKMELDKANKDKKDKIFKSNFHIEVLFSPPSGAYRPPGMEKRASSIPQLDRLKVSDKESASEPQTDADDDLSSEEDEDEWNEDHK* # ORIGINAL: g7057.t1 original gene structure, not modified by PASA NODE_660_length_19384_cov_41.36 AUGUSTUS gene 3204 5315 . - . ID=g7057;Name=g7057.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS mRNA 3204 5315 . - . ID=g7057.t1;Parent=g7057;Name=g7057.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 3204 5315 . - . ID=g7057.t1.exon1;Parent=g7057.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 3204 5315 . - 0 ID=cds.g7057.t1;Parent=g7057.t1 #PROT g7057.t1 g7057 MRGRPLRPGLHGGRLRASSMTITRRLPFDRIVFAVSAILCTAVVFLPSASLAVWSSACPPGTFMGSVPVWGADDADRCLPCPSGAYSASWNSTSCLKCSTTDVCADAAALQGRVCKSPRAYCPLGGSVGPLEIGWSDLPPLDRSLFNVPTSTYLKATSASEHVSYAVTSKDLINHASFSVQSVNSFLLFAYFITALLLVPLLACTRLGRRLLQFIDRVYEKPTRDIVITFSESADVGEDAVERSVKPVRTRSVARAIFTLLALLGGAAAAAYVIQDFIANRYFEERSLGPITALNAAARGGGYDVVHDVADTFPIPVFSFLLLGTSFTAANTTLSVVADFGDGLLVNETANIDDVGSSFARPSRIPTNNLSYPSTYHHQGSGGQSRIREWGAWVTDALDEWDDARPATPSVINGDTVSRMYDRIKPPGMTSIRRPEDMSTCRAMGRGHCLLVMMRHSASSRLNFGTTVRFTFYVGTKTGVPAVMQAVRARIVTLSWQTLKSSDGRINNSMSWVDLGSTLTQLPGVGRQYQLQIAPDLHNLFYTKTILKGPKMEPLSLGFDLQPGERAEGAESSTSSFSGSFLAEPGPLGTAVLRVEFTIPAYVLQIDIRERISMPAFLTSLVSLPAAVVGAGGIGFTIFVALRVSWKRGALGRLWDRVSLAVFASTRRNRKPSVARQPSESKENLLGAPLLPMTDIRSDTVVY* # ORIGINAL: g7056.t1 original gene structure, not modified by PASA NODE_660_length_19384_cov_41.36 AUGUSTUS gene 338 2239 . + . ID=g7056;Name=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS mRNA 338 2239 . + . ID=g7056.t1;Parent=g7056;Name=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 338 408 . + . ID=g7056.t1.exon1;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 338 408 . + 2 ID=cds.g7056.t1;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 637 772 . + . ID=g7056.t1.exon2;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 637 772 . + 0 ID=cds.g7056.t1;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 1125 1243 . + . ID=g7056.t1.exon3;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 1125 1243 . + 2 ID=cds.g7056.t1;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 1697 2239 . + . ID=g7056.t1.exon4;Parent=g7056.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 1697 2239 . + 0 ID=cds.g7056.t1;Parent=g7056.t1 #PROT g7056.t1 g7056 RVCKYDDRVFDLLLRRLWDEPNKDVRTEIVRAITDLGLGQRTFQAVFRSLDSSDQMARSRAVTSVATLGIKSSRVVKTLLDMLDTDPSHVVRLALIRGLRDLEVADPNVMAVLVSRSSGDNELSQEAAKAVESLQAAMERLAIEKDRNDRRKQIQDRVKAAEDKEKEKELVKEKEKELVNHQMQVQMEIQRAKEKGKRAVQFALAKASGASAVGRKTQSAKDRTARSHRGGSAPIAAVRSSTSLGAAPAVLLPLTLLSQRERRKKMRTPTMIAVDFVDLRKMTKLSIY* # ORIGINAL: g7060.t1 original gene structure, not modified by PASA NODE_660_length_19384_cov_41.36 AUGUSTUS gene 18087 19213 . - . ID=g7060;Name=g7060.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS mRNA 18087 19213 . - . ID=g7060.t1;Parent=g7060;Name=g7060.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 19124 19213 . - . ID=g7060.t1.exon1;Parent=g7060.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 19124 19213 . - 0 ID=cds.g7060.t1;Parent=g7060.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 18087 19049 . - . ID=g7060.t1.exon2;Parent=g7060.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 18087 19049 . - 0 ID=cds.g7060.t1;Parent=g7060.t1 #PROT g7060.t1 g7060 MRTPSDGTRMAARQQRHSRESPSDADFDRLADPSLTKAYHGTGLGLAICDNLIRLLGGELGVRSRKGFGSTFWFTLPSHSPGAAMSPANEPRGSIVVVGGREFSLCVATCLNTLNVVAVMPEPNGSIPEHAMSLPVVIDLDSPLGLAGLAGLCAEKSDVVLFSSRIAIATDRRICRKPVTCEKLRTVADPVKRISTVSQASLSAAGSITGSRTILVAEDNRINMMVVASFLGCAGYTVVRASNGVEVCDAYAAAPEGSVAAVLMDLQMPVRNGLDATREIRALERKRGWRPVPVIALTASTLPDIMRDCLDVGMDNFVAKPVKKEVLLHVLSRTVGCAADGGTNAPVLHA* # ORIGINAL: g7059.t1 original gene structure, not modified by PASA NODE_660_length_19384_cov_41.36 AUGUSTUS gene 12697 16990 . - . ID=g7059;Name=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS mRNA 12697 16990 . - . ID=g7059.t1;Parent=g7059;Name=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 16815 16990 . - . ID=g7059.t1.exon1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 16815 16990 . - 0 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 16513 16655 . - . ID=g7059.t1.exon2;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 16513 16655 . - 1 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 16211 16324 . - . ID=g7059.t1.exon3;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 16211 16324 . - 2 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 15572 15758 . - . ID=g7059.t1.exon4;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 15572 15758 . - 2 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 15175 15372 . - . ID=g7059.t1.exon5;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 15175 15372 . - 1 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 14449 14567 . - . ID=g7059.t1.exon6;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 14449 14567 . - 1 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 13995 14242 . - . ID=g7059.t1.exon7;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 13995 14242 . - 2 ID=cds.g7059.t1;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 12697 13710 . - . ID=g7059.t1.exon8;Parent=g7059.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 12697 13710 . - 0 ID=cds.g7059.t1;Parent=g7059.t1 #PROT g7059.t1 g7059 MEPTKISHPDGIDRIVSFDDEILLLTRPQWQEDATVAECPGCKAKFTALKRRHHCRQCGKVFCQQCCDKRVALPHLGYENAVRVCEDCTSIACLLSYAGTEHITMQGHAARGLGEMTSRPDQMIKVVALGGLDTLAYLCKSGDRDVQYYASGGLLNLARHSHVRPIMAEAGATVALVRLLQRTGEESVQLNVVGALCLLAASDELKDVLVGCGAVAPLASIALRSTKAQTLAAKTVSVLASLPSNQTIIGEMPGVTIQNILKLTQSELPDVQRYAAKTMAYLSLASERAKSSIILEDAALGGTLAAIALTAHGAQTLSHAACALANLATNGEDQPNLHPDCLRALTEMAVKGTDVEALKHVARGLANFALHQCHHERLLGNVAAILALLNQASPEVQRHTIRAVDNLITKSANPVGSRDALAASGVLLCLETLSSSGASNVRVRASSVLGRASNAASLPKYVPTQRHASASNAKGNNVQSGVSDNGEVKGKSAVSGGQHVTRRLSTAVNSVSKRNEKSAAEVLSDGEDEGELPDMHARPVSTFVARLPSRETDAPQSTNTALSATGENNKSDGLEAADPSVSFEDALREALEDDLYKPLPSTAAVAQQQRELARRKEHFQQEHAYLQRQISRGEGLHGVSSGRHALGEDMRDDGGDYATSEAGVRAFALVERMDALAKARVDRARKMSELCNVAAGNKTMDAIAGESSRMSARGERLHASAAILKELLVADG* # ORIGINAL: g7058.t1 original gene structure, not modified by PASA NODE_660_length_19384_cov_41.36 AUGUSTUS gene 8774 11401 . - . ID=g7058;Name=g7058.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS mRNA 8774 11401 . - . ID=g7058.t1;Parent=g7058;Name=g7058.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS exon 8774 11401 . - . ID=g7058.t1.exon1;Parent=g7058.t1 NODE_660_length_19384_cov_41.36 AUGUSTUS CDS 8774 11401 . - 0 ID=cds.g7058.t1;Parent=g7058.t1 #PROT g7058.t1 g7058 MHIRLWTPGVGEPEEAEMVPLLAVQNNTRSAQRYYSHFASRTIQYTSGVAAAVASSVAAAATRCIQQITSTNADSVTTTKLAECKSQIRRAKVAIAAIINKMRENGIQNPATTTNGKAMENLSEIADVQRRAAKAFDTLSGDDIKYFDGEPDYLHPLLAAIEAVEIKRVRIAVVAAIKAGKSLVVANFVGAKLSPSDSSACTTLPVLFRHDRHAVGSRLDICEALYESVTSAHSAIREFMKASGGDGQNIRRDLLNGADGLSDYARRVMNSSESVAITKTAVDDEIPRVLNSINKTARLCHRIPSLAISLITYAAQPEHYPVVTTAMSVFQGHDLPFDIEILDMPGIDEAEFAGEMGSIMDVGIKSSNQSILVIDAQTIEATHNIAALEPLIEAIASSGMWVVVSKMDVVPTLSRDAVRDIVTRQVNRVTPLSRDNVIPVSLTRGWLMQRLRSSRRRQLEQGADDANTSPGIANSEESADLQAARRILFGEGCPVESQVDELAARVLDESNVHELKSRILHDTQEHHLPSVVTGIVKATVVAFGGMLVKIDRFKNIIETKKEAADALYRQGTDCINTSCDCEFPHQAPNILGASASLRKIAIEDEAAADKVSRDLYRILRQHICPEEHTFASQEAAEKAARSVAGDARDRVQAEIHEKITGPHNRKLTELNLEGLVSKTVAAIVSTIEKDIGPPSSQVRVALQELSDSRDVFKVIPIDIHSCGGERETHFGDILRRYRWPTSKVLPGEGFFAMIIGFLAGRGISAFKEEEIITAIQGVAAQMVANEIERCAEEIKARLEGLEAFQRKLESEVRKTFDDVREKYDRISKCRDEVSRCLEEMRRIQDHLATDAQTIAAKMTAATNNRGSVVGDDVFE* # ORIGINAL: g764.t1 original gene structure, not modified by PASA NODE_5530_length_816_cov_278.003 AUGUSTUS gene 1 750 . - . ID=g764;Name=g764.t1 NODE_5530_length_816_cov_278.003 AUGUSTUS mRNA 1 750 . - . ID=g764.t1;Parent=g764;Name=g764.t1 NODE_5530_length_816_cov_278.003 AUGUSTUS exon 1 750 . - . ID=g764.t1.exon1;Parent=g764.t1 NODE_5530_length_816_cov_278.003 AUGUSTUS CDS 1 750 . - 0 ID=cds.g764.t1;Parent=g764.t1 #PROT g764.t1 g764 MPFGLKNAPAAFQRCMDLVLAGLTWQTCLVYIDDIIVFAPTFEEHLRRLREVFDRIRAAGLTLRGVKCNFGQSSLPFLGYIVGSDGLALNPAKTSKVINMPPPQNVSEVRSFLGMTQYYRKFIEKYAQIATPLTELTKNDIPWRWTPHEQAAFERLKIALTSAPVLAFPSFDPAFRFRVRTDASKHGLGAVIEQEQLDKSWRPIAYDSRKLHIGERLWTTQEWEALAILWALQQFRPYLHGRHFHLQTDH # PASA_UPDATE: g8459.t1, single gene model update, valid-1, status:[pasa:asmbl_5516,status:12], valid-1 NODE_3072_length_4401_cov_35.0106 . gene 199 732 . - . ID=g8459;Name=g8459.t1 NODE_3072_length_4401_cov_35.0106 . mRNA 199 732 . - . ID=g8459.t1;Parent=g8459;Name=g8459.t1 NODE_3072_length_4401_cov_35.0106 . five_prime_UTR 465 732 . - . ID=g8459.t1.utr5p1;Parent=g8459.t1 NODE_3072_length_4401_cov_35.0106 . exon 199 732 . - . ID=g8459.t1.exon1;Parent=g8459.t1 NODE_3072_length_4401_cov_35.0106 . CDS 199 464 . - 0 ID=cds.g8459.t1;Parent=g8459.t1;3_prime_partial=true #PROT g8459.t1 g8459 MEGNESDENDESQEDHPAGQGIHGHGHGSQAHHGAEFSLGADEWNRFDDDAEPSLFFQRMNSSQILYVPKRKIPKLVGSYILGDVLGE # PASA_UPDATE: g8460.t1, single gene model update, valid-1, status:[pasa:asmbl_5515,status:12], valid-1 NODE_3072_length_4401_cov_35.0106 . gene 2894 4233 . + . ID=g8460;Name=g8460.t1 NODE_3072_length_4401_cov_35.0106 . mRNA 2894 4233 . + . ID=g8460.t1;Parent=g8460;Name=g8460.t1 NODE_3072_length_4401_cov_35.0106 . five_prime_UTR 2894 3051 . + . ID=g8460.t1.utr5p1;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . exon 2894 3093 . + . ID=g8460.t1.exon1;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . CDS 3052 3093 . + 0 ID=cds.g8460.t1;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . exon 3377 3571 . + . ID=g8460.t1.exon2;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . CDS 3377 3571 . + 0 ID=cds.g8460.t1;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . exon 3826 3926 . + . ID=g8460.t1.exon3;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . CDS 3826 3926 . + 0 ID=cds.g8460.t1;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . exon 4091 4233 . + . ID=g8460.t1.exon4;Parent=g8460.t1 NODE_3072_length_4401_cov_35.0106 . CDS 4091 4233 . + 1 ID=cds.g8460.t1;Parent=g8460.t1;3_prime_partial=true #PROT g8460.t1 g8460 MTDNVKVAVRVRPFNSREKDRNAKVIIKMEGNNTYISDPNAPGEKPREFSFDFSYWSHDGFKERADGYLEAAQARYADQTKVFDDLGRGVLSNAWEGYNCSLFAYGQTGSGKSYSMVGYGTNKGIVPVVSEELFKGIDNHKGTPTQFQVTFSMLEIYNEQ # ORIGINAL: g14494.t1 original gene structure, not modified by PASA NODE_2222_length_7181_cov_42.234 AUGUSTUS gene 5394 6900 . + . ID=g14494;Name=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS mRNA 5394 6900 . + . ID=g14494.t1;Parent=g14494;Name=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 5394 5748 . + . ID=g14494.t1.exon1;Parent=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 5394 5748 . + 0 ID=cds.g14494.t1;Parent=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 5971 6348 . + . ID=g14494.t1.exon2;Parent=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 5971 6348 . + 2 ID=cds.g14494.t1;Parent=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 6599 6900 . + . ID=g14494.t1.exon3;Parent=g14494.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 6599 6900 . + 2 ID=cds.g14494.t1;Parent=g14494.t1 #PROT g14494.t1 g14494 MWIVSGGRRVPALRLHRQGRRLGFASLSHPRIGVLSALILVLAFGSVVNCVDGLLYGTQVVTDTELVLLAHGSGGQNDYVSCSAEVVGDDGAAMKVLLSRVDASTELTGSLVSGYKWQGSLPLSGKCRRYHIDCVRTPLKDVGSDGRDELRLLMAQNPPVAVPPPITPPSSLGGLIRHSRRSNPDALADTIVGRDDAGTAYAGGVQPAMESVDESIPRFPLQGSAFTFEGGVCDVCDLRVAKNCGLSETLVRVTVVSDMLIFLAYFSIPIQLLYFARRRQHLPLRHVVYLFGAFIVLCGLTHLVQVWMPWVHTYTLLAVLKVLTAIVSCITSGCLIHVSALSVG* # PASA_UPDATE: g14492.t1, single gene model update, valid-1, status:[pasa:asmbl_3809,status:12], valid-1 NODE_2222_length_7181_cov_42.234 . gene 1490 3203 . + . ID=g14492;Name=g14492.t1 NODE_2222_length_7181_cov_42.234 . mRNA 1490 3203 . + . ID=g14492.t1;Parent=g14492;Name=g14492.t1 NODE_2222_length_7181_cov_42.234 . five_prime_UTR 1490 1571 . + . ID=g14492.t1.utr5p1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . exon 1490 1660 . + . ID=g14492.t1.exon1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . CDS 1572 1660 . + 0 ID=cds.g14492.t1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . exon 1873 2017 . + . ID=g14492.t1.exon2;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . CDS 1873 2017 . + 1 ID=cds.g14492.t1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . exon 2289 2380 . + . ID=g14492.t1.exon3;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . CDS 2289 2380 . + 0 ID=cds.g14492.t1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . exon 2564 3203 . + . ID=g14492.t1.exon4;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . CDS 2564 2765 . + 1 ID=cds.g14492.t1;Parent=g14492.t1 NODE_2222_length_7181_cov_42.234 . three_prime_UTR 2766 3203 . + . ID=g14492.t1.utr3p1;Parent=g14492.t1 #PROT g14492.t1 g14492 MGEEIVSVVDENNLVVDNLPRSRVRRENLRHRATFIFVHNPTTGELVVQKRTPIKDYCPSHYDVCTGGVLQKGEEYGPSAARELEEEIGLHTDTLRHVFDFLFEDDATRVWGGAFACEFAGPLSSLSLQESEVSEVAWMTPAEIYRRIQAGEKFTPDSMRCLAIAIEKGILTATK* # ORIGINAL: g14493.t1 original gene structure, not modified by PASA NODE_2222_length_7181_cov_42.234 AUGUSTUS gene 2845 3463 . - . ID=g14493;Name=g14493.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS mRNA 2845 3463 . - . ID=g14493.t1;Parent=g14493;Name=g14493.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 3278 3463 . - . ID=g14493.t1.exon1;Parent=g14493.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 3278 3463 . - 0 ID=cds.g14493.t1;Parent=g14493.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 2845 2952 . - . ID=g14493.t1.exon2;Parent=g14493.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 2845 2952 . - 0 ID=cds.g14493.t1;Parent=g14493.t1 #PROT g14493.t1 g14493 MDSTEECLGLPASSEDNNVNANVEIKVGETKVLDHMGPLVVDVDGSLKRIANWDSMTEAEREVAHRRLTARNKARLEKLRAAAEANDAKDAKDKEEL* # ORIGINAL: g14491.t1 original gene structure, not modified by PASA NODE_2222_length_7181_cov_42.234 AUGUSTUS gene 256 1258 . - . ID=g14491;Name=g14491.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS mRNA 256 1258 . - . ID=g14491.t1;Parent=g14491;Name=g14491.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 1171 1258 . - . ID=g14491.t1.exon1;Parent=g14491.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 1171 1258 . - 0 ID=cds.g14491.t1;Parent=g14491.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS exon 256 866 . - . ID=g14491.t1.exon2;Parent=g14491.t1 NODE_2222_length_7181_cov_42.234 AUGUSTUS CDS 256 866 . - 2 ID=cds.g14491.t1;Parent=g14491.t1 #PROT g14491.t1 g14491 MAALALSEAVQRAVAAIRSAEALIITAGAGLGCDSGLPAFRTVDGFWRAYPPMKKLNLHFQEMSNPEWFRRDPSLAWGFFGHRLYLYKNATPHDGFRILRDVGARMRKGHFVVTSNVDGQFQKAEFSEDRILEVHGSIHHWQCTDAYGSDKCNGHIYPAPDAPIVVSEDTFRADTPLPLCPKCGTNLARPNILMFNDMLWLEDRTCAQEERFDAFLKQVGAAPLVVIELGAGK # ORIGINAL: g12266.t1 original gene structure, not modified by PASA NODE_2048_length_7932_cov_52.8177 AUGUSTUS gene 217 2954 . - . ID=g12266;Name=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS mRNA 217 2954 . - . ID=g12266.t1;Parent=g12266;Name=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS exon 2822 2954 . - . ID=g12266.t1.exon1;Parent=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS CDS 2822 2954 . - 0 ID=cds.g12266.t1;Parent=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS exon 950 1763 . - . ID=g12266.t1.exon2;Parent=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS CDS 950 1763 . - 2 ID=cds.g12266.t1;Parent=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS exon 217 700 . - . ID=g12266.t1.exon3;Parent=g12266.t1 NODE_2048_length_7932_cov_52.8177 AUGUSTUS CDS 217 700 . - 1 ID=cds.g12266.t1;Parent=g12266.t1 #PROT g12266.t1 g12266 MVPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVASNVVTEVKLRRSEKKGISVTEYVMAPVDLSNRGNNYTHQFIGIESEKTSVYKFEIGVLLTTTAIDDYRPGAQEWQDVYLEGSRTHRRSKPSKTNEQEHAKESEFGRKRRRVETEKSFPSNPSVAPSPPIHPNQPLAATVDGNDTTCAAFTSDVEFHGQPPHAVPSANTSSVDDIDEKGRSVLLRNVFHATNGDNSLITVLINKGAGLEYATTWGSQNVLHVAVGRSPCVVKIILDVLLEALDDADTPRNTTTAKRKYTLQDVRSILTHQSCRWKDESGKVVHGGNTAFHSFFFKCIALARKKSPRYISDSLEVLRLLCNAAARLFSDNDDEDQTYEGVWNMTNESRLCPRKLCRQLADVGKDSEWGEAVGKMECIIHYRGRESLLLWLPTANVVVDADDDDGSSAIQLNGIPSPSPSFVAFCEGFSPDSTGE* # PASA_UPDATE: g12267.t1, single gene model update, valid-1, status:[pasa:asmbl_3358,status:3], valid-1 NODE_2048_length_7932_cov_52.8177 . gene 5052 7652 . + . ID=g12267;Name=g12267.t1 NODE_2048_length_7932_cov_52.8177 . mRNA 5052 7652 . + . ID=g12267.t1;Parent=g12267;Name=g12267.t1 NODE_2048_length_7932_cov_52.8177 . five_prime_UTR 5052 5124 . + . ID=g12267.t1.utr5p1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . exon 5052 5274 . + . ID=g12267.t1.exon1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . CDS 5125 5274 . + 0 ID=cds.g12267.t1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . exon 5430 5631 . + . ID=g12267.t1.exon2;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . CDS 5430 5631 . + 0 ID=cds.g12267.t1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . exon 5813 6031 . + . ID=g12267.t1.exon3;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . CDS 5813 6031 . + 2 ID=cds.g12267.t1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . exon 6166 6380 . + . ID=g12267.t1.exon4;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . CDS 6166 6380 . + 2 ID=cds.g12267.t1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . exon 6523 7652 . + . ID=g12267.t1.exon5;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . CDS 6523 7326 . + 0 ID=cds.g12267.t1;Parent=g12267.t1 NODE_2048_length_7932_cov_52.8177 . three_prime_UTR 7327 7652 . + . ID=g12267.t1.utr3p1;Parent=g12267.t1 #PROT g12267.t1 g12267 MTQDQIYRPIEPTADVEYQLRRESSSLHDVVHASSVEIPEDESDKLGDDKIHFSFRKLWAFAGPGFLMSIAYLDPGNIDSDLQAGAAAGFHLLWVLFWATVLGWILQSLAARLGVVTGKHLAEVCRESLPKGPRIALWLMTELAIIGSDIQEVIGSAIAINILSNNHVPIWAGVLITAFDTFTFLFLENYGLRKLEAVFGILIAAMAVSFGAQYGIAAPNQLDVLKGVVIPSLPSGSITQAVGLIGAVIMPHNIYLHSALVQSRTIDRTNKKKVKEANYYYRIETAIALGIAFVINLFVVSVFADSFYGKDDPNTDFDISNAGDRLAEKFGTYAKYVWAIGLLAAGQSSTMTGTYAGQFVMQGFLNLTIVPWKRVLLTRSVAIVPAIIVATVTQNSSEVLSKMGEWLNILQSVQLPFAVIPVLVATSSTALMGGFRIGRKLESFCWAAAVLVMGTNFFLIEQFASDNLPHAPYVYIVLSLLAIFYVSFIVYLASRSELGIAIRSRLCWRSVANADIDERRPLIADTNSG* # ORIGINAL: g7586.t1 original gene structure, not modified by PASA NODE_3847_length_2635_cov_29.1367 AUGUSTUS gene 314 2142 . + . ID=g7586;Name=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS mRNA 314 2142 . + . ID=g7586.t1;Parent=g7586;Name=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS exon 314 469 . + . ID=g7586.t1.exon1;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS CDS 314 469 . + 0 ID=cds.g7586.t1;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS exon 927 1057 . + . ID=g7586.t1.exon2;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS CDS 927 1057 . + 0 ID=cds.g7586.t1;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS exon 1247 1325 . + . ID=g7586.t1.exon3;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS CDS 1247 1325 . + 1 ID=cds.g7586.t1;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS exon 1600 1818 . + . ID=g7586.t1.exon4;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS CDS 1600 1818 . + 0 ID=cds.g7586.t1;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS exon 1969 2142 . + . ID=g7586.t1.exon5;Parent=g7586.t1 NODE_3847_length_2635_cov_29.1367 AUGUSTUS CDS 1969 2142 . + 0 ID=cds.g7586.t1;Parent=g7586.t1 #PROT g7586.t1 g7586 ATAIETLGISLPFSSSYPAEHPGKRAECENVGAAIRNLLEKDIKPRDIMTKKAFENSIVITMALGGSTNAVLHLIAMARAAEVELTLDDFQRIADKVPFIADLKPSGTYVMEDLHSIGGVPAIQKYLLEKGLLHGDCLTVTGKTLAENLAPLPGLTPGQKIIHPIEAPIKSTGHIQILYGNLATEGSVAKITGKEGLQFTGPARNFDSEEEMLHALERNEIKKGDVVVIRYQGPKGGPGMPEMRGCPSRRVT* # PASA_UPDATE: g2257.t1, single gene model update, valid-1, status:[pasa:asmbl_2703,status:12], valid-1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . gene 294 1246 . - . ID=g2257;Name=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . mRNA 294 1246 . - . ID=g2257.t1;Parent=g2257;Name=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . five_prime_UTR 1211 1246 . - . ID=g2257.t1.utr5p1;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 1187 1246 . - . ID=g2257.t1.exon1;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 1187 1210 . - 0 ID=cds.g2257.t1;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 763 859 . - . ID=g2257.t1.exon2;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 763 859 . - 0 ID=cds.g2257.t1;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 294 418 . - . ID=g2257.t1.exon3;Parent=g2257.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 294 418 . - 2 ID=cds.g2257.t1;Parent=g2257.t1;3_prime_partial=true #PROT g2257.t1 g2257 MSGRIKAEDLKRVFEELGVHHTHYMVDEAARTLRTADGYIGVRQFAQWADHTWGWIVNERDQPNVGTLGAVLEVDGESELDM # PASA_UPDATE: g2258.t1, single gene model update, valid-1, status:[pasa:asmbl_2702,status:12], valid-1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . gene 4368 8853 . + . ID=g2258;Name=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . mRNA 4368 8853 . + . ID=g2258.t1;Parent=g2258;Name=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 4368 4479 . + . ID=g2258.t1.exon1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 4368 4479 . + 0 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 4668 5415 . + . ID=g2258.t1.exon2;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 4668 5415 . + 2 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 5728 6103 . + . ID=g2258.t1.exon3;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 5728 6103 . + 1 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 6302 6670 . + . ID=g2258.t1.exon4;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 6302 6670 . + 0 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 7083 7199 . + . ID=g2258.t1.exon5;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 7083 7199 . + 0 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 7632 8528 . + . ID=g2258.t1.exon6;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 7632 8528 . + 0 ID=cds.g2258.t1;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . exon 8686 8853 . + . ID=g2258.t1.exon7;Parent=g2258.t1 NODE_1819_length_9076_cov_40.632_potentialcontaminant . CDS 8686 8853 . + 0 ID=cds.g2258.t1;Parent=g2258.t1;3_prime_partial=true #PROT g2258.t1 g2258 MRRRADMAVRLSSMAVWAVVIVLMHATLCSAELLYGPDNGGCVTQEQELCDAVDAVHSDGPLLSDNGIIISYYILMRRAVSQQMMLLLNSTVPVRTNATGIEWYAQRIYYFHNESAFSSQHDLTSAYARPRTPFAVNFPLYYERYFYMERRDFEDWAQLPSPASLCAKPMVFIPSSKWHVVGVDANTTSPDFYVSDAFSCLPRNSSVCGWNASAPTVENSMVMYGEFDEQRYLPFACRRMYMLAPGVQPCLSSVVDDQMDLLRLYPCRVIYGNGLKILGPLIKSLWSLERLNRVYGYLVISNTSLVDFRTRAGKPLQLAAVSALDIDGNGRLSSLEGLNWLQLVLGQLRITNNPSLETIRGLSPRVEINGDIVIASNNRMQTLEGLYFPYNVLGSFTIANNTKLESLRGAENVTTINGNLRIYGNNLLNNTSGLSNVEVIGGTLVIESNPSLVNLDTFQMLNMIGFTVNPVDGSPMPDASSVIRDNAALAQILFAALFYCTSLEISLNPMLDLIAFASLDQISGDLRVSNNLNLRTLGFIFLQRIFGSLAIIHNPSIVRIIGLSNLTFVNDDLKIENNKNLKIPGDFNSLFVIGGNLHINGNAAITVLSLFSSLQIVGGDVVISANPRLLEILAFDTLLLVNGSLVVNHNPLLSDIRGFGQLMLVRMGIQVKNNSNIAHLGRGRGIGELLFLGGPLVITDNDSLENVTFFGSSRCENFFLRYNSFANSFGKAWELLTSLDVPQYDVNNGWYYRRRRGSFPASGGVFSMDDSGGARDRFAHVSGLGSRVERTYASLHMLIKQVRSSAVGAEHRRSRSVQPHVMPGDTYGCHCGPIQVSDNKALRSFNLPFLTVVEGDFELLRNPSLVAASMRIHGRGFVLGTCRVEDNMSLDNLFLIETNVTSYGFVIKRNAKLKGVILGAESIAPNGTV # PASA_UPDATE: g10406.t1, single gene model update, valid-1, status:[pasa:asmbl_2734,status:12], valid-1 NODE_1826_length_9049_cov_38.9334 . gene 7048 8944 . + . ID=g10406;Name=g10406.t1 NODE_1826_length_9049_cov_38.9334 . mRNA 7048 8944 . + . ID=g10406.t1;Parent=g10406;Name=g10406.t1 NODE_1826_length_9049_cov_38.9334 . five_prime_UTR 7048 7099 . + . ID=g10406.t1.utr5p1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 7048 7223 . + . ID=g10406.t1.exon1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 7100 7223 . + 0 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 7343 7420 . + . ID=g10406.t1.exon2;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 7343 7420 . + 2 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 7557 7625 . + . ID=g10406.t1.exon3;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 7557 7625 . + 2 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 7740 7873 . + . ID=g10406.t1.exon4;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 7740 7873 . + 2 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 8206 8361 . + . ID=g10406.t1.exon5;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 8206 8361 . + 0 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 8727 8835 . + . ID=g10406.t1.exon6;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 8727 8835 . + 0 ID=cds.g10406.t1;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . exon 8907 8944 . + . ID=g10406.t1.exon7;Parent=g10406.t1 NODE_1826_length_9049_cov_38.9334 . CDS 8907 8944 . + 2 ID=cds.g10406.t1;Parent=g10406.t1 #PROT g10406.t1 g10406 MSALRTITARMGLNAIRTFHATARASASEPVFKPDEPDSSLGETRKMNLCQAVNNAMDIALEKDSTAIIFGEDVAFGGVFRCTQDLARKHGKDRVFNTPLCEQGIVGFGIGAASAGASAIAEIQFADYIFPAFDQLVNEAAKYRYRSGNEFNCGGLTVRAPCGAVGHGGHYHSQSPEAYFAHTPGIKVVVPRSPIQAKGLLLAAIRDKNPVVFFEPKILYRQAKSESCVGFKSVS* # PASA_UPDATE: g10404.t1, single gene model update, valid-1, status:[pasa:asmbl_2729,status:12], valid-1 NODE_1826_length_9049_cov_38.9334 . gene 160 3185 . + . ID=g10404;Name=g10404.t1 NODE_1826_length_9049_cov_38.9334 . mRNA 160 3185 . + . ID=g10404.t1;Parent=g10404;Name=g10404.t1 NODE_1826_length_9049_cov_38.9334 . exon 160 219 . + . ID=g10404.t1.exon1;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . CDS 160 219 . + 0 ID=cds.g10404.t1;Parent=g10404.t1;5_prime_partial=true NODE_1826_length_9049_cov_38.9334 . exon 455 1719 . + . ID=g10404.t1.exon2;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . CDS 455 1719 . + 0 ID=cds.g10404.t1;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . exon 2454 2631 . + . ID=g10404.t1.exon3;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . CDS 2454 2631 . + 1 ID=cds.g10404.t1;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . exon 2756 3185 . + . ID=g10404.t1.exon4;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . CDS 2756 2911 . + 0 ID=cds.g10404.t1;Parent=g10404.t1 NODE_1826_length_9049_cov_38.9334 . three_prime_UTR 2912 3185 . + . ID=g10404.t1.utr3p1;Parent=g10404.t1 #PROT g10404.t1 g10404 PVASNATFPGGRVEKKPQHLSIKPLLPRTFLGPRRQLARGEVAKKPTNYLEMFLSRGGKVPEPEKKKIIRPGSQESIVEWDLKPTKYSVPVPAHAIINRIHHPPNRPPHDQGHNVGNTMQHLPAQPYVPLDYSGGHPPAGLDPLDMSMEANLDAQIAAETAAAYPSEPIRGQVAGGSNGPNNNNAGGVVASKWRGPAVVARHPPQHGKPANTTTTTTAGGQGKGRPPQPNNPQMNRALHASKRGAEPAVAALTNSSVRQQQQQRPGPTAPSGKAAPKGGPPAKVGVGAKGPANAHAAVTSRATQQQHGTTTQHPPPGHHGGPHGQPHETDASGLHSNSLRHAGPANGSHHPQQHLPPHAGGGSGGGGGGHVQVARGASMVAKGVAAKTSVRGHTMHQQHANDDGEWEADPERSPVQKRGTAAQPSKSMIAVPSKSMHNGNGGNKATADRAANKKQIPPPRRQQQPKRHGIASIPKPKLKTVQPIADNAAVDESYYYGYDGSVDDSSFNTSGGSHHRQQPHHQPHHQQQVPPQKGKAAAPQGRHPVAAPAKRR* # PASA_UPDATE: g10405.t1, single gene model update, valid-1, status:[pasa:asmbl_2733,status:3], valid-1 NODE_1826_length_9049_cov_38.9334 . gene 5397 6615 . + . ID=g10405;Name=g10405.t1 NODE_1826_length_9049_cov_38.9334 . mRNA 5397 6615 . + . ID=g10405.t1;Parent=g10405;Name=g10405.t1 NODE_1826_length_9049_cov_38.9334 . five_prime_UTR 5397 5614 . + . ID=g10405.t1.utr5p1;Parent=g10405.t1 NODE_1826_length_9049_cov_38.9334 . exon 5397 5780 . + . ID=g10405.t1.exon1;Parent=g10405.t1 NODE_1826_length_9049_cov_38.9334 . CDS 5615 5780 . + 0 ID=cds.g10405.t1;Parent=g10405.t1 NODE_1826_length_9049_cov_38.9334 . exon 5880 6615 . + . ID=g10405.t1.exon2;Parent=g10405.t1 NODE_1826_length_9049_cov_38.9334 . CDS 5880 6517 . + 2 ID=cds.g10405.t1;Parent=g10405.t1 NODE_1826_length_9049_cov_38.9334 . three_prime_UTR 6518 6615 . + . ID=g10405.t1.utr3p1;Parent=g10405.t1 #PROT g10405.t1 g10405 MNRMCYGDARPIRAHEVIRYGDCDSGYFEEYTCSVVEPANMDGHGDANAIPEPLTDFADVVIQNTFHRTYSPTFKPFMLELLRRSRCRPTALIMALIYLERLSNAIGAPAKAENCAHRLFLTAIILAVKYVSDDVYKNRDFASITGVDVTKINAMEREFLRFLDYRLYVSDQEYASFLSYIEESLFPVQQPMPAAVPVAQAPNIAPAVGSSRIVNGPVEIYAMNNSNPTYGCIWTYSGQPIYHQVSPVIEPSRLPIVPMDFNAYIIY* # PASA_UPDATE: g654.t1, single gene model update, valid-1, status:[pasa:asmbl_7214,status:12], valid-1 NODE_4307_length_1844_cov_26.3318 . gene 168 1729 . + . ID=g654;Name=g654.t1 NODE_4307_length_1844_cov_26.3318 . mRNA 168 1729 . + . ID=g654.t1;Parent=g654;Name=g654.t1 NODE_4307_length_1844_cov_26.3318 . five_prime_UTR 168 384 . + . ID=g654.t1.utr5p1;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . exon 168 469 . + . ID=g654.t1.exon1;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . CDS 385 469 . + 0 ID=cds.g654.t1;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . exon 698 876 . + . ID=g654.t1.exon2;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . CDS 698 876 . + 2 ID=cds.g654.t1;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . exon 1156 1298 . + . ID=g654.t1.exon3;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . CDS 1156 1298 . + 0 ID=cds.g654.t1;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . exon 1644 1729 . + . ID=g654.t1.exon4;Parent=g654.t1 NODE_4307_length_1844_cov_26.3318 . CDS 1644 1729 . + 1 ID=cds.g654.t1;Parent=g654.t1;3_prime_partial=true #PROT g654.t1 g654 MADGSFHDVPELVETTIGESISARTDSVGYFEGLGPCDMCHVRKQCEKTSTFGRPTLLDLGSYHHIYGADVSSPASIAAYVHSLANALVMQVASKGWRIHRTTFCSFNAFSRHDVRIEVAMPGGIDAYAVDSVGRRHEMNERAWMEVRVSAVLRALSVPPETKA # ORIGINAL: g4960.t1 original gene structure, not modified by PASA NODE_3979_length_2408_cov_175.446 AUGUSTUS gene 405 1988 . - . ID=g4960;Name=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS mRNA 405 1988 . - . ID=g4960.t1;Parent=g4960;Name=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS exon 1935 1988 . - . ID=g4960.t1.exon1;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS CDS 1935 1988 . - 0 ID=cds.g4960.t1;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS exon 1055 1779 . - . ID=g4960.t1.exon2;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS CDS 1055 1779 . - 0 ID=cds.g4960.t1;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS exon 735 825 . - . ID=g4960.t1.exon3;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS CDS 735 825 . - 1 ID=cds.g4960.t1;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS exon 405 581 . - . ID=g4960.t1.exon4;Parent=g4960.t1 NODE_3979_length_2408_cov_175.446 AUGUSTUS CDS 405 581 . - 0 ID=cds.g4960.t1;Parent=g4960.t1 #PROT g4960.t1 g4960 METEGRLIFNSYVKAGSALRNYAHVLDLIMRLRQICDHPALCTSRLPTQAEIDRAKQLGVDYTDENIRRLVHLLRGNEGENCSICYEPLSEAVITPCGHVFDRTCVVRALEASGGKCPFCCSEAMPAQLISAPPEDESGGIDGDSAVREKGVSGDTPVKSSTKVEALLRYLEATRAKDPSIKSVVFSQWTSMLKLIEKPLESAGIRFVKLEGTMTREKRDAAVDAFNTNPSVSVFLVSLKCGGVGLNLVAASQVFMMDPWWNPSTEDQAIDRVHRLGQTRPVHVFRLIIEGTIEERILALQSKKRDLVADTFGGERARDRLQEMRLDDLRLLLGGGHSRSDARGDGHVV # ORIGINAL: g12843.t1 original gene structure, not modified by PASA NODE_6424_length_572_cov_293.529 AUGUSTUS gene 2 572 . + . ID=g12843;Name=g12843.t1 NODE_6424_length_572_cov_293.529 AUGUSTUS mRNA 2 572 . + . ID=g12843.t1;Parent=g12843;Name=g12843.t1 NODE_6424_length_572_cov_293.529 AUGUSTUS exon 2 572 . + . ID=g12843.t1.exon1;Parent=g12843.t1 NODE_6424_length_572_cov_293.529 AUGUSTUS CDS 2 572 . + 2 ID=cds.g12843.t1;Parent=g12843.t1 #PROT g12843.t1 g12843 ADADDISPTQDTTTTSPPPGPPTPMDAVETPSPPPSDTPPPQIRRPSVHNPALDPERYELDPLTLLPHGVKLDPAILERLAANEAQELRWTLQEYVDTFVPKSGKPGRTDITTFKIDTGDNVPVSVPPRRYSFRERDAMTAQTTTNRSHGLVEPAHANPWAFRAVMADKPDGSLRFCIDYRKLNNITVG # PASA_UPDATE: g13955.t1, single gene model update, valid-1, status:[pasa:asmbl_4308,status:12], valid-1 NODE_2436_length_6287_cov_61.9477 . gene 142 6287 . - . ID=g13955;Name=g13955.t1 NODE_2436_length_6287_cov_61.9477 . mRNA 142 6287 . - . ID=g13955.t1;Parent=g13955;Name=g13955.t1 NODE_2436_length_6287_cov_61.9477 . exon 142 6287 . - . ID=g13955.t1.exon1;Parent=g13955.t1 NODE_2436_length_6287_cov_61.9477 . CDS 142 6287 . - 0 ID=cds.g13955.t1;Parent=g13955.t1;5_prime_partial=true;3_prime_partial=true #PROT g13955.t1 g13955 QQQQQQQQQQQQQQQQQQQQSRYLEHHRADSLKDGGGLSDGMHSSSSSSREARLEMQVRQLLSRSADLESHLVEYEQRHDELSAALSEAHVTLAQVNRQAGQQKQQLQQQQQQQQQQQQQQQQPLDHDLHSQRAQSRVHDSAWTGTATQPAIIQPMDSGSAVGGGLSGMSVDDLKEECESLRRELDEASALNGELTQRIRSLEHGEVEAERVLHEKERHRMALDSAEKRLQSLGHSAQAWETRAVTLESQLADARKMTETLALRARGEGARANELASQMALADERTVELVRKVASLEMALRESNASAAVFERRVKDAEARSSSAEHDLDATYARAASLERELRMAQWSAVSDKGDGSGGVDASASGASGRLFERCLQLESENGELQAAMRKLERALADGHLHSSTMIERHGAMVADVTTLSAEVTELRVSLRKAEGAVRQWQAQAVAAELRASDAERQCADLRARLSESDENVGDMQRKTHELQGEKAKLESRLEDSESDKLDAKSSASKWKSKFLELESKLHEAESRAAGLEVAAGEYRKELDRLRGATEDKSSNATTPANGHPSRPPLVRGPSSQSSPRSQSRQVITDSDAPSGVIVDGAVPMSPRHRDGVQSSPSLQHLQQNAQRPQVLVSADSSSRHFDGDLVRRDSRGDNGLEIEMLTRELEKARETICEFEIRVARSEVAAESAKAAAEVSMSQFLALQASIVSQSSGLERKAPASATAAEVQGHSKDAAIRSISPATVQQPLQEQDQHVSLQQQPQQPQQPQQQQQQQQQQQQHNAFQPQSKHPLDTITELAESWGSLSMEEPPAHPRTEVVKKPSPLSHTPETPVVITISASPPDTPSSGASLTTPSPENNQQQHQQQQQAPTPKRGRSPSLQAEYELLTYEKTLLESRLRTEKAVATLLESRFATVSGEKMALERKLGDALARAERFEAELHSSAEHGRVLETRRVELEGRLHDLEVMLARRAANHRRMNSLPRDQTISVPASSRTPDNMSPRGPPPRNLPFQASLSLTDDGASPLASASAGQLSALLEQSRVRQSELVDEMESARREKHQLHEKLESIRTLTAAERASSGAKVAEISEEAKRLTRENDVLRASALSSSAMVASLESRVYEVEQTMMEQSLALDDALAEIAARDRRMSEMDAEIASMESALAASSRASRDAAASEVVREVADGTVPIDSSRAELESERRAFEEERTGWDEEKKLWDDERTALEACVLGLRSELAKIKLAVGRTTPNGTSIGSGGSGGSGDGSGAPGTPSIRSGSLPGDADRLASEVERLKAAVASVEAALASKERELNTANARIAVCESELAESSVAHARTLEEFEDAVTSGVREQMAEYEDELDRREAKLDQRAAALAAREAGIARDVNSTGAHNCADDPDVVERMTSLEGRLVVAEERAREAELGNALLRVRVTEDVASSSSSLSVPASNTAHNDLGDRVSELEDALALADSKIAWLEAQCAAVSAKARQLEEESQAHVMGVGMYEDAEGDGLAFVGSGIAPSVSALQGLLFAAEQRSRDAVEESLVLTDRCADLEAEVNLLRTKCSSADDALVDADARLFEVRAECENLEDELSALRASMDIAEKSRRASSADGTSLIAGTIAADVRAPEVRDVRVHGAGRDDVVDRSALEALQKALELAHARLAAVEAERDMLAEQCELIDARARSVHHDAWEHRSDGHASVTPIEHSLQTARGSGSDGMNISGQTALFDDEMGQLASWEVERAQLHEKIDMLEDALQEATATSAAHDVACSRLRDELHVARTKLEAATAELYDATTRHADERELLLTQIHELELTLAKANNNARESDTGHGDGESVLLATDHSSTELSAHAQGNGGLKHSAHVNGTGHGSSGDVASIHAATENGGLSVLPSLIPRLVALQRGDGESNVWSSGDESSSMTGDDANHVDDIGESLLDSPMRVGDLTRKSASKDSRTLQRQWELAFVRNVSKAYAEALEKEKSRVRERAEFYADFDVEAAMAALRESDARIAELASELEVVRQRYEDALGSLKRQGDRGMRRRVLCSRVDDCDKDLS # ORIGINAL: g4170.t1 original gene structure, not modified by PASA NODE_598_length_20435_cov_47.0838 AUGUSTUS gene 14860 17136 . - . ID=g4170;Name=g4170.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS mRNA 14860 17136 . - . ID=g4170.t1;Parent=g4170;Name=g4170.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS exon 14860 17136 . - . ID=g4170.t1.exon1;Parent=g4170.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS CDS 14860 17136 . - 0 ID=cds.g4170.t1;Parent=g4170.t1 #PROT g4170.t1 g4170 MQHSAIDGTVFDDARLRQLVQVKQQELHDASELRIAALEAALAKAQTVNTTERERFHSLKNDFEYNLKLIDERDAELARFDSQFAQLTGTLAARDAQVSELMIALDRTTEEVARQRAASNEQRLVDASRHEELFKRADTNHAALEEAWCCERDQLNGEIRELRRRLNNFDEDAQLHRHEFDRALQDALAQRDRETLTRTTELIGALASAEDLARRAARDADACRLDAQARTEECRAMSKRVIDLECNAHRAESAFAERESELRSMITTLETALEGSRGECVRTQQNLESLRSQLADATCERERAVSSVAESAAAREDQLRTALTEAREATARELAAANERAWVAEDRCRALEAEVGKLHAGISEARAVVEEMYADRERIGAARDTELTGLRDKCEKLAAQRELALRKAMNERAREGEERRRALEAEVVKLRAAFSQACGVVDEVQSERKHSDAASKKELSALRDKCDRRTAQREQAVRRVRELEETIMALRKERARKLTDTATSPATSTSHSVSEYVPEHVPESGDSGRVVELEAQNGRLRSVIAEMRGEMERMSAEIGRLSRPQTPAYAVVQPHSRLRRSLEHAVQDIRRLIREREKLVDINNSLRAEIDRMSVVQFNAASSALQEPTRPRPSSRSSLLSPLYEESVRIPSPGSLLSGLDRDDDASKAECTSGGPDILVIDHAGDNSARALRESDMFSVEGRQHSLAERHRPLTSTERHTIGQRASRAKLRDHRPGNAGVNAATRTVRNYNLRDVDS* # PASA_UPDATE: g4168.t1, single gene model update, valid-1, status:[pasa:asmbl_8395,status:12], valid-1 NODE_598_length_20435_cov_47.0838 . gene 10773 12672 . + . ID=g4168;Name=g4168.t1 NODE_598_length_20435_cov_47.0838 . mRNA 10773 12672 . + . ID=g4168.t1;Parent=g4168;Name=g4168.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 10773 10841 . + . ID=g4168.t1.utr5p1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 10773 10851 . + . ID=g4168.t1.exon1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 10842 10851 . + 0 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 10948 11037 . + . ID=g4168.t1.exon2;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 10948 11037 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 11229 11375 . + . ID=g4168.t1.exon3;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 11229 11375 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 11711 11857 . + . ID=g4168.t1.exon4;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 11711 11857 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 12001 12219 . + . ID=g4168.t1.exon5;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 12001 12219 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 12390 12458 . + . ID=g4168.t1.exon6;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 12390 12458 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . exon 12593 12672 . + . ID=g4168.t1.exon7;Parent=g4168.t1 NODE_598_length_20435_cov_47.0838 . CDS 12593 12672 . + 2 ID=cds.g4168.t1;Parent=g4168.t1 #PROT g4168.t1 g4168 MAEDADSITESEIKRIAGEFDILSVSKFDASHRGIRSLSTFAQCVGIVSLNLAHNCIVSLSDLAELSKLRILDVSYNKVKRLNGLENLCELERLYLQGNQIDGFESVAVLSSHPLLTHLSFQKLDGSDANPICKLSVYEGALFSRFPSLVALDGRRIGARKGNERADFYAACDDLRRDIGKVRAGKQTGSVADVSAPKPISWMPDDFWKIAPCGKDEEMRAICDKFSDDLSYVKKLNGEALALIADLTDGTEP* # PASA_UPDATE: g4165.t1, single gene model update, valid-1, status:[pasa:asmbl_8401,status:3], valid-1 NODE_598_length_20435_cov_47.0838 . gene 733 2127 . - . ID=g4165;Name=g4165.t1 NODE_598_length_20435_cov_47.0838 . mRNA 733 2127 . - . ID=g4165.t1;Parent=g4165;Name=g4165.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 2082 2127 . - . ID=g4165.t1.utr5p1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 1860 1892 . - . ID=g4165.t1.utr5p2;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . exon 2082 2127 . - . ID=g4165.t1.exon1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . exon 1810 1892 . - . ID=g4165.t1.exon2;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . CDS 1810 1859 . - 0 ID=cds.g4165.t1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . exon 1633 1675 . - . ID=g4165.t1.exon3;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . CDS 1633 1675 . - 1 ID=cds.g4165.t1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . exon 1381 1475 . - . ID=g4165.t1.exon4;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . CDS 1381 1475 . - 0 ID=cds.g4165.t1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . exon 733 1160 . - . ID=g4165.t1.exon5;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . CDS 908 1160 . - 1 ID=cds.g4165.t1;Parent=g4165.t1 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 733 907 . - . ID=g4165.t1.utr3p1;Parent=g4165.t1 #PROT g4165.t1 g4165 MSGSANRKPIRVWCDGCYDMMHFGHANSLRQARLMGDLLVVGVHSDEEITRNKGPPVMNEQERYKMVRACKWVDEIVENAPYNTTIDTLDAYNCDFSVHGDDITTNADGIDTYQAVKDAGRYRCVLTVNIDVLCFCMHFVRACVCL* # PASA_UPDATE: g4171.t1, single gene model update, valid-1, status:[pasa:asmbl_8396,status:3], valid-1 # PASA_UPDATE: g4171.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8397,status:3], valid-1 # PASA_UPDATE: g4171.t1.1.5b6be70c.1.5b6bee88, alt-splice addition, valid-1, status:[pasa:asmbl_8399,status:24], valid-1 NODE_598_length_20435_cov_47.0838 . gene 17326 18777 . + . ID=g4171;Name=g4171.t1 NODE_598_length_20435_cov_47.0838 . mRNA 17326 18777 . + . ID=g4171.t1;Parent=g4171;Name=g4171.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 17326 17402 . + . ID=g4171.t1.utr5p1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 17326 17489 . + . ID=g4171.t1.exon1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 17403 17489 . + 0 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 17748 17869 . + . ID=g4171.t1.exon2;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 17748 17869 . + 0 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 17994 18081 . + . ID=g4171.t1.exon3;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 17994 18081 . + 1 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 18187 18341 . + . ID=g4171.t1.exon4;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 18187 18341 . + 0 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 18441 18585 . + . ID=g4171.t1.exon5;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 18441 18585 . + 1 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . exon 18703 18777 . + . ID=g4171.t1.exon6;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . CDS 18703 18726 . + 0 ID=cds.g4171.t1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 18727 18777 . + . ID=g4171.t1.utr3p1;Parent=g4171.t1 NODE_598_length_20435_cov_47.0838 . mRNA 17326 18777 . + . ID=g4171.t1.1.5b6be70c;Parent=g4171;Name=g4171.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 17326 17402 . + . ID=g4171.t1.1.5b6be70c.utr5p1;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . exon 17326 17489 . + . ID=g4171.t1.1.5b6be70c.exon1;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . CDS 17403 17489 . + 0 ID=cds.g4171.t1.1.5b6be70c;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . exon 17748 17869 . + . ID=g4171.t1.1.5b6be70c.exon2;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . CDS 17748 17869 . + 0 ID=cds.g4171.t1.1.5b6be70c;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . exon 17994 18081 . + . ID=g4171.t1.1.5b6be70c.exon3;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . CDS 17994 18081 . + 1 ID=cds.g4171.t1.1.5b6be70c;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . exon 18187 18585 . + . ID=g4171.t1.1.5b6be70c.exon4;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . CDS 18187 18345 . + 0 ID=cds.g4171.t1.1.5b6be70c;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . exon 18703 18777 . + . ID=g4171.t1.1.5b6be70c.exon5;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . three_prime_UTR 18346 18585 . + . ID=g4171.t1.1.5b6be70c.utr3p1;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . three_prime_UTR 18703 18777 . + . ID=g4171.t1.1.5b6be70c.utr3p2;Parent=g4171.t1.1.5b6be70c NODE_598_length_20435_cov_47.0838 . mRNA 17326 18777 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88;Parent=g4171;Name=g4171.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 17326 17402 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.utr5p1;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . exon 17326 17489 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.exon1;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . CDS 17403 17489 . + 0 ID=cds.g4171.t1.1.5b6be70c.1.5b6bee88;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . exon 17748 17869 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.exon2;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . CDS 17748 17869 . + 0 ID=cds.g4171.t1.1.5b6be70c.1.5b6bee88;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . exon 17994 18585 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.exon3;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . CDS 17994 18129 . + 1 ID=cds.g4171.t1.1.5b6be70c.1.5b6bee88;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . exon 18703 18777 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.exon4;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 18130 18585 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.utr3p1;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 18703 18777 . + . ID=g4171.t1.1.5b6be70c.1.5b6bee88.utr3p2;Parent=g4171.t1.1.5b6be70c.1.5b6bee88 #PROT g4171.t1 g4171 MGASNSTEQRRVTLERERVYTTQSGVGVKVSERVVRHYRGDEDSGNDTRERTPRRPSAAEQNEERSRAEREHARDLERLRIAQQEFMAQQLKQSTANEQELRKSIEKDIRAQIELEQRETASKRREEQLRTEIQRSEEIESLAAAMHSRFRREKMGDYSHQCEPQRRAAIECYLKNSQKPLNCSSEVRSFSNCAIAAKEDFLSQLK* #PROT g4171.t1.1.5b6be70c g4171 MGASNSTEQRRVTLERERVYTTQSGVGVKVSERVVRHYRGDEDSGNDTRERTPRRPSAAEQNEERSRAEREHARDLERLRIAQQEFMAQQLKQSTANEQELRKSIEKDIRAQIELEQRETASKRREEQLRTEIQRSEEIESLAAAMHSRFR* #PROT g4171.t1.1.5b6be70c.1.5b6bee88 g4171 MGASNSTEQRRVTLERERVYTTQSGVGVKVSERVVRHYRGDEDSGNDTRERTPRRPSAAEQNEERSRAEREHARDLERLRIAQQEFMAQQLKQSTANEQASDGWSQMYAHTQTK* # ORIGINAL: g4172.t1 original gene structure, not modified by PASA NODE_598_length_20435_cov_47.0838 AUGUSTUS gene 19823 20149 . + . ID=g4172;Name=g4172.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS mRNA 19823 20149 . + . ID=g4172.t1;Parent=g4172;Name=g4172.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS exon 19823 20149 . + . ID=g4172.t1.exon1;Parent=g4172.t1 NODE_598_length_20435_cov_47.0838 AUGUSTUS CDS 19823 20149 . + 0 ID=cds.g4172.t1;Parent=g4172.t1 #PROT g4172.t1 g4172 MDAALNSVAGFLSLRVRRAQLEMSNQSDDSGADAADGLPADVSDWSSSDVASWVQRVMHKPTENFGKTFEDEQYDGKQLLRLSAVPFEDGEWKCLVPRMAARGHLRQG* # PASA_UPDATE: g4169.t1, single gene model update, valid-1, status:[pasa:asmbl_8404,status:3], valid-1 NODE_598_length_20435_cov_47.0838 . gene 12664 14095 . - . ID=g4169;Name=g4169.t1 NODE_598_length_20435_cov_47.0838 . mRNA 12664 14095 . - . ID=g4169.t1;Parent=g4169;Name=g4169.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 13669 14095 . - . ID=g4169.t1.utr5p1;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . exon 13551 14095 . - . ID=g4169.t1.exon1;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . CDS 13551 13668 . - 0 ID=cds.g4169.t1;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . exon 13206 13430 . - . ID=g4169.t1.exon2;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . CDS 13206 13430 . - 2 ID=cds.g4169.t1;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . exon 12664 13014 . - . ID=g4169.t1.exon3;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . CDS 12806 13014 . - 2 ID=cds.g4169.t1;Parent=g4169.t1 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 12664 12805 . - . ID=g4169.t1.utr3p1;Parent=g4169.t1 #PROT g4169.t1 g4169 MPARPVTLSTAIGTSCLVVAWIMSIAAVSTPVWLNRDTMGLKTTLGLTAQCDESANGNSWCEEVKYANLPSCFRATLVLLVLGIIALAVTIMLSMSAMRRLRAMRPARYMGFVTSFFFALATLVFPGGFDSEYVGGKAFKLPEGTTVGYSYILFIMSTLLVFVGELFSGKANAERFHFHGHLH* # PASA_UPDATE: g4166.t1, single gene model update, valid-1, status:[pasa:asmbl_8394,status:12], valid-1 NODE_598_length_20435_cov_47.0838 . gene 2567 7709 . + . ID=g4166;Name=g4166.t1 NODE_598_length_20435_cov_47.0838 . mRNA 2567 7709 . + . ID=g4166.t1;Parent=g4166;Name=g4166.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 2567 2805 . + . ID=g4166.t1.utr5p1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 2567 2924 . + . ID=g4166.t1.exon1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 2806 2924 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 3064 3151 . + . ID=g4166.t1.exon2;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 3064 3151 . + 1 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 3440 3504 . + . ID=g4166.t1.exon3;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 3440 3504 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 3644 3696 . + . ID=g4166.t1.exon4;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 3644 3696 . + 1 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 3930 4020 . + . ID=g4166.t1.exon5;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 3930 4020 . + 2 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 4296 4372 . + . ID=g4166.t1.exon6;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 4296 4372 . + 1 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 4606 4668 . + . ID=g4166.t1.exon7;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 4606 4668 . + 2 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 4777 4820 . + . ID=g4166.t1.exon8;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 4777 4820 . + 2 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 4953 5102 . + . ID=g4166.t1.exon9;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 4953 5102 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 5269 5514 . + . ID=g4166.t1.exon10;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 5269 5514 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 5682 5795 . + . ID=g4166.t1.exon11;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 5682 5795 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 5904 6013 . + . ID=g4166.t1.exon12;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 5904 6013 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 6141 6303 . + . ID=g4166.t1.exon13;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 6141 6303 . + 1 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 6499 6569 . + . ID=g4166.t1.exon14;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 6499 6569 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 6716 6842 . + . ID=g4166.t1.exon15;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 6716 6842 . + 1 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 7035 7193 . + . ID=g4166.t1.exon16;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 7035 7193 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 7316 7438 . + . ID=g4166.t1.exon17;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 7316 7438 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . exon 7620 7709 . + . ID=g4166.t1.exon18;Parent=g4166.t1 NODE_598_length_20435_cov_47.0838 . CDS 7620 7709 . + 0 ID=cds.g4166.t1;Parent=g4166.t1 #PROT g4166.t1 g4166 MAATEDDKKHVNYILLAEFNIDTGSGLSHQYPAPTGADPHVLAELMLPDGAHKREEDWTIFFLNQEPPNDGRKPVSSNRQSVRRPEQHHQAATPVLEAYVYEFTEANQAWDQIGETRMKIHLEPNAIAIMDGETLIRRIGRNAELQHQSMEPMYHCVISGDAAFGFRFAEDQLERQFETHCEELRVPEVALVKKDEAAKKDDDVEEDPENSKPKPFLYCLNLIRNKLTAEVRRGAVVKSMAICTRHKFIHPLLLLALDRYFKTPDVSVLAELYDAINAMDLRGMPDLTQSERQILRTSGDKEKQVYTTAVNYMKINIPIRCPIAMLEDEVGDPSVVALINKFGLGVMTIYNALLSDKRIMFLGYNRPSHEVAQYVLSACQLVCPPIRGLITRAFPYTNLTYLKFLEFRGYIVGVTNPVFKENSNWWDVLCDMDSGKVIMNPKLPVPETVKHLGMDNEFMAEVLHRIEAHYGEDHIRKMFNDYTQRIAEIALECAEFSDDANKRKEIDGNSMRVEAWKRTMTFKTFSEDRNKMKAARTIKNCDAERHIAKLRVRKTLSAQEIYSIYKDFINSITTEAQLMEFLSYLPENQGGLYPVAVSLLHPAENVRKATAELFTRLAKLKTGSDFIGGMNPFLRLAYERSKVLLQPRKT* # PASA_UPDATE: g4167.t1, single gene model update, valid-1, status:[pasa:asmbl_8402,status:12], valid-1 NODE_598_length_20435_cov_47.0838 . gene 8625 10535 . - . ID=g4167;Name=g4167.t1 NODE_598_length_20435_cov_47.0838 . mRNA 8625 10535 . - . ID=g4167.t1;Parent=g4167;Name=g4167.t1 NODE_598_length_20435_cov_47.0838 . five_prime_UTR 10475 10535 . - . ID=g4167.t1.utr5p1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . exon 10404 10535 . - . ID=g4167.t1.exon1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . CDS 10404 10474 . - 0 ID=cds.g4167.t1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . exon 10120 10213 . - . ID=g4167.t1.exon2;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . CDS 10120 10213 . - 1 ID=cds.g4167.t1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . exon 9638 9839 . - . ID=g4167.t1.exon3;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . CDS 9638 9839 . - 0 ID=cds.g4167.t1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . exon 9280 9433 . - . ID=g4167.t1.exon4;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . CDS 9280 9433 . - 2 ID=cds.g4167.t1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . exon 8625 9034 . - . ID=g4167.t1.exon5;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . CDS 8893 9034 . - 1 ID=cds.g4167.t1;Parent=g4167.t1 NODE_598_length_20435_cov_47.0838 . three_prime_UTR 8625 8892 . - . ID=g4167.t1.utr3p1;Parent=g4167.t1 #PROT g4167.t1 g4167 MAPIALAALALLALSSFCSALDDRSTVMTLKLLPGKIECVWEQLNQGERLDITYQVLSGGQLDIDFTVFDPHDVLISHEQRSREGTTAHEVESGGQYRVCFSNSFSTMAEKNVFFELRALKPGHEFEWESEEADLRDNLVDISVQNVQNTVDRISMKIEHVTEDMGYFQHRMTRHMATAEDNLFRTTWFSVIECVVLVIVAVIQVYFIRSFFQDSRRIRL* # ORIGINAL: g8859.t1 original gene structure, not modified by PASA NODE_3952_length_2467_cov_37.3353 AUGUSTUS gene 1641 2271 . - . ID=g8859;Name=g8859.t1 NODE_3952_length_2467_cov_37.3353 AUGUSTUS mRNA 1641 2271 . - . ID=g8859.t1;Parent=g8859;Name=g8859.t1 NODE_3952_length_2467_cov_37.3353 AUGUSTUS exon 1641 2271 . - . ID=g8859.t1.exon1;Parent=g8859.t1 NODE_3952_length_2467_cov_37.3353 AUGUSTUS CDS 1641 2271 . - 1 ID=cds.g8859.t1;Parent=g8859.t1 #PROT g8859.t1 g8859 NASLLPRPSELHREFDERQRQDDWFESDDDSHVSTEPNSAHQSPNGKPPGDAFAVNTNNNNNNNNNNANNNNANANANNNSSTAIAGAPGASAIINSDGRSTTPPLAPLRRFNGLVDYPDDDDDDMLQSVAASASASASSPQVGVFARGVHAQPNVGRKPISIHISSSIHLRQLGEVESGQVSPKRPLDTSDERMDVDVQQSPTKKQRA* # ORIGINAL: g8270.t1 original gene structure, not modified by PASA NODE_1652_length_9981_cov_40.0074 AUGUSTUS gene 4891 6255 . - . ID=g8270;Name=g8270.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS mRNA 4891 6255 . - . ID=g8270.t1;Parent=g8270;Name=g8270.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 6211 6255 . - . ID=g8270.t1.exon1;Parent=g8270.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 6211 6255 . - 0 ID=cds.g8270.t1;Parent=g8270.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 4891 6027 . - . ID=g8270.t1.exon2;Parent=g8270.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 4891 6027 . - 0 ID=cds.g8270.t1;Parent=g8270.t1 #PROT g8270.t1 g8270 MSGFSRASFSSLPIEIQPDIGDVSALGGVHTLSLVSCKGVTDVSALGGVHTLSLVSCKGVTDVSALGGVHSLTISSCSGVTDVSALGGVHSLDLTCSKVADVSALGNIHTLKLFDCMKVTDVSALSGVHTLNLKYCKPVVNVSALGGVHSLDLSCCVGVTDVSALGGVHVLNLFACIGVTDVSALGGVHTLTLSLCSGVTDVSALGHVHSLRLTYCYGVTDVSALGGVHALDLKCCSGVTDVSALGGIHTLNLSCCRGVTDVSALGNVHTLDLSNCQGVTDVSALGGVHTLNLSCCRGVTDVSALGSVHTLDLSNCQGVTDVSALGSLHSLRFVTCQGVTDVSALGGVHTFDFSYCIGVTDVSALGRVHVLNITGCANVVDVSALGEVRALSR* # PASA_UPDATE: g8269.t1, single gene model update, valid-1, status:[pasa:asmbl_2239,status:12],[pasa:asmbl_2240,status:12], valid-1 NODE_1652_length_9981_cov_40.0074 . gene 2370 4767 . + . ID=g8269;Name=g8269.t1 NODE_1652_length_9981_cov_40.0074 . mRNA 2370 4767 . + . ID=g8269.t1;Parent=g8269;Name=g8269.t1 NODE_1652_length_9981_cov_40.0074 . exon 2370 2780 . + . ID=g8269.t1.exon1;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . CDS 2370 2780 . + 0 ID=cds.g8269.t1;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . exon 2887 3628 . + . ID=g8269.t1.exon2;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . CDS 2887 3628 . + 0 ID=cds.g8269.t1;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . exon 3847 4767 . + . ID=g8269.t1.exon3;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . CDS 3847 4430 . + 2 ID=cds.g8269.t1;Parent=g8269.t1 NODE_1652_length_9981_cov_40.0074 . three_prime_UTR 4431 4767 . + . ID=g8269.t1.utr3p1;Parent=g8269.t1 #PROT g8269.t1 g8269 MLRARNPHLHMQMRTNAQVLPSLDVSRVTLRRDGTCKVVFACGVRVALSPNGAFFACDGRQVRLQSTGDGQLGLHRCEMPPEACTCASFVKGRTPFALACQRIFVAEAIDARNVHAELPYICAEHMRSVRPDDVVVMPSRSVERDIRWQPTAAVVRTTNVGTIVELVSTDGSATLTLDPCGLIFTVQFLLTLPATHDARDGGAVDRDVAEARTEYLRKWNDESIDAWVARVTAVQLTMPTDAVDQHRGHSHADSPSASRNGGDDVTRTCVWVRQQRPVLLASDAWRAPLGIAMRALEGHVDGPLLPRVLQSGEASSPRPAPLDPLPSGTDPLSRVMHMCGDDRDFCQTDACNGGIEDTEADLSSPVVVMGDPLATHWVVDEQHGGCIPHVESLIAADSSLVAITSNDACFHVRPRLTHSRVDDSDSRCDFQRSLGIISPIAWPIPRDFAVARLSALHPPSIHPCQDGVPLLPPTDNDDKHSVNDARRSTFYDFGAVVRGAAQLFKSVSAALHSSGIQTDSYGGLGDTGMHHVPYAREERHGAWPSGPSSVNLSRMSIREAIAVENAKIERMLERLGPR* # ORIGINAL: g8271.t1 original gene structure, not modified by PASA NODE_1652_length_9981_cov_40.0074 AUGUSTUS gene 6753 8834 . - . ID=g8271;Name=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS mRNA 6753 8834 . - . ID=g8271.t1;Parent=g8271;Name=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 8551 8834 . - . ID=g8271.t1.exon1;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 8551 8834 . - 0 ID=cds.g8271.t1;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 8120 8242 . - . ID=g8271.t1.exon2;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 8120 8242 . - 1 ID=cds.g8271.t1;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 7835 7982 . - . ID=g8271.t1.exon3;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 7835 7982 . - 1 ID=cds.g8271.t1;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 7552 7568 . - . ID=g8271.t1.exon4;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 7552 7568 . - 0 ID=cds.g8271.t1;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS exon 6753 7368 . - . ID=g8271.t1.exon5;Parent=g8271.t1 NODE_1652_length_9981_cov_40.0074 AUGUSTUS CDS 6753 7368 . - 1 ID=cds.g8271.t1;Parent=g8271.t1 #PROT g8271.t1 g8271 MADSVENNVNHKGMAVFAVFASVTLFTCAGIFFYFAVRGTGFKYRRPHSKTKAPEENMLSGMATCITGVVWFSRAVLFIMLSGGHEVKFDIENFRYYDYLLSCPMLVLDVCFITEQPFKWTITLLTALTLFIGAISVNSNEPETFAYFTLGCVFFALLFYWLFRNLYRRLADYPKNIRIYLKLAMIAGFLSIEADAYVHGFLDICAKGLYGAFLTRFRLCIEDLHNEQYFANGGTEGTVSGEKEGNAMSYPASQADGKREAFAQRLEDVRLNMGSEMQPIETRNVFVPILGGGQGNVDDMHADGMPIADGGDAIDFRALPHGGGYSEYAHEGYVPSRPAQSVSGRQPVGAQSVRERRPAPSGDEVYMMLRNFNALVNGMLSGYDDAPGNTNDTTH* # PASA_UPDATE: g8268.t1, single gene model update, valid-1, status:[pasa:asmbl_2241,status:12], valid-1 NODE_1652_length_9981_cov_40.0074 . gene 102 1989 . - . ID=g8268;Name=g8268.t1 NODE_1652_length_9981_cov_40.0074 . mRNA 102 1989 . - . ID=g8268.t1;Parent=g8268;Name=g8268.t1 NODE_1652_length_9981_cov_40.0074 . five_prime_UTR 1676 1989 . - . ID=g8268.t1.utr5p1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . exon 1620 1989 . - . ID=g8268.t1.exon1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . CDS 1620 1675 . - 0 ID=cds.g8268.t1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . exon 1178 1319 . - . ID=g8268.t1.exon2;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . CDS 1178 1319 . - 1 ID=cds.g8268.t1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . exon 766 860 . - . ID=g8268.t1.exon3;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . CDS 766 860 . - 0 ID=cds.g8268.t1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . exon 463 568 . - . ID=g8268.t1.exon4;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . CDS 463 568 . - 1 ID=cds.g8268.t1;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . exon 102 216 . - . ID=g8268.t1.exon5;Parent=g8268.t1 NODE_1652_length_9981_cov_40.0074 . CDS 102 216 . - 0 ID=cds.g8268.t1;Parent=g8268.t1;3_prime_partial=true #PROT g8268.t1 g8268 MDYGSPRSVGMDTSYGMDPDLTEAEYNAFKEATNIIHNSARVIQRAWRRYSDRQLFMALKDCICRAEQSLTFELLRKLSPAEASLLRDPTLKARIRFRFGGCEFPPAIYYKIYTKADSVQYITGKKVIKAGTQAAADACKMMGNRKFLGQVMEDAYKSDKPTEDYDVATIK # PASA_UPDATE: g9209.t1, single gene model update, valid-1, status:[pasa:asmbl_8039,status:12], valid-1 NODE_5393_length_872_cov_45.8432 . gene 21 851 . - . ID=g9209;Name=g9209.t1 NODE_5393_length_872_cov_45.8432 . mRNA 21 851 . - . ID=g9209.t1;Parent=g9209;Name=g9209.t1 NODE_5393_length_872_cov_45.8432 . five_prime_UTR 798 851 . - . ID=g9209.t1.utr5p1;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . exon 794 851 . - . ID=g9209.t1.exon1;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . CDS 794 797 . - 0 ID=cds.g9209.t1;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . exon 432 584 . - . ID=g9209.t1.exon2;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . CDS 432 584 . - 2 ID=cds.g9209.t1;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . exon 21 295 . - . ID=g9209.t1.exon3;Parent=g9209.t1 NODE_5393_length_872_cov_45.8432 . CDS 21 295 . - 2 ID=cds.g9209.t1;Parent=g9209.t1;3_prime_partial=true #PROT g9209.t1 g9209 MILQYGFITLFVAAFPLAPAFALLNNIVEIRLDARKVLRQSRRVPALQAEDIGTWEGILTAVAKLSVITNAFVISFTSDFIPRLVYEDEFGTIDGFIPYGYAQSTITDPSNNEGACMYNDYKDANPLFYWKVVAARLAFVIVFE # PASA_UPDATE: g1801.t1, single gene model update, valid-1, status:[pasa:asmbl_5656,status:3], valid-1 NODE_3163_length_4139_cov_37.1156 . gene 1010 3999 . - . ID=g1801;Name=g1801.t1 NODE_3163_length_4139_cov_37.1156 . mRNA 1010 3999 . - . ID=g1801.t1;Parent=g1801;Name=g1801.t1 NODE_3163_length_4139_cov_37.1156 . five_prime_UTR 3874 3999 . - . ID=g1801.t1.utr5p1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 3800 3999 . - . ID=g1801.t1.exon1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . CDS 3800 3873 . - 0 ID=cds.g1801.t1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 3194 3459 . - . ID=g1801.t1.exon2;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . CDS 3194 3459 . - 1 ID=cds.g1801.t1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 2867 2949 . - . ID=g1801.t1.exon3;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . CDS 2867 2949 . - 2 ID=cds.g1801.t1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 2332 2467 . - . ID=g1801.t1.exon4;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . CDS 2332 2467 . - 0 ID=cds.g1801.t1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 1350 2057 . - . ID=g1801.t1.exon5;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . CDS 1687 2057 . - 2 ID=cds.g1801.t1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . exon 1010 1140 . - . ID=g1801.t1.exon6;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . three_prime_UTR 1350 1686 . - . ID=g1801.t1.utr3p1;Parent=g1801.t1 NODE_3163_length_4139_cov_37.1156 . three_prime_UTR 1010 1140 . - . ID=g1801.t1.utr3p2;Parent=g1801.t1 #PROT g1801.t1 g1801 MISGLFFFNHKGDVLISRIYRDDISRQNVDAFRVHVIHSRHQVRSPVTIIAKTSYFHIKANNVWIVAVTRQNVNAAMVFELLSKTVAVFKSHFGTVNEDAVKSNFVLIYEVLDEVLDFGYPQTVDANALKSLVLQEGIKAAVDEKGPGLTTQVTGAISWRREGIKYRKNQVYIDVIESVNLLMSLEGKVLSSHVAGSVMMRAYLSGMPECKYGMNDKIATDREAASKKKSGGGIAIDDCTFHQCVKLGKFETDRSISFVPPDGEFELMRYRTTENINLPFKVIPLVKESGRQRVEIKVCACVCVCVVVC* # PASA_UPDATE: g1812.t1, single gene model update, valid-1, status:[pasa:asmbl_2050,status:3], valid-1 NODE_1589_length_10322_cov_42.3407 . gene 460 2998 . + . ID=g1812;Name=g1812.t1 NODE_1589_length_10322_cov_42.3407 . mRNA 460 2998 . + . ID=g1812.t1;Parent=g1812;Name=g1812.t1 NODE_1589_length_10322_cov_42.3407 . five_prime_UTR 460 595 . + . ID=g1812.t1.utr5p1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 460 676 . + . ID=g1812.t1.exon1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 596 676 . + 0 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 911 1146 . + . ID=g1812.t1.exon2;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 911 1146 . + 0 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 1297 1413 . + . ID=g1812.t1.exon3;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 1297 1413 . + 1 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 1675 1723 . + . ID=g1812.t1.exon4;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 1675 1723 . + 1 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 1937 2098 . + . ID=g1812.t1.exon5;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 1937 2098 . + 0 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 2265 2367 . + . ID=g1812.t1.exon6;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 2265 2367 . + 0 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . exon 2696 2998 . + . ID=g1812.t1.exon7;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . CDS 2696 2832 . + 2 ID=cds.g1812.t1;Parent=g1812.t1 NODE_1589_length_10322_cov_42.3407 . three_prime_UTR 2833 2998 . + . ID=g1812.t1.utr3p1;Parent=g1812.t1 #PROT g1812.t1 g1812 MAALMAPLWRGLPIYSTRIAACASRGMHKSASLHADPRTYLQNAARQNQAKPIGRGSAPGRQIMIKPTCLPFVLDTYLPVGARRGDRFFLFRYHEAFKAFCSKWIALTSTYFTTRKYVGNSRFSYLRFPIEALDAFNEVMKASFEGNRRPIEQYTDGTLQQTILADLSKRSKSGLKGTYVRGDLIARPRIVHASLARPEEKTYACQVTLEIKQNMAGAFHDQSGRLVGGSLEVRPSREFIVFERMISEPKSKWRMVGRVDPATPRAKHEANESRLTSIWRAMKELVTGKKAKNA* # ORIGINAL: g1814.t1 original gene structure, not modified by PASA NODE_1589_length_10322_cov_42.3407 AUGUSTUS gene 6534 10111 . + . ID=g1814;Name=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS mRNA 6534 10111 . + . ID=g1814.t1;Parent=g1814;Name=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 6534 6639 . + . ID=g1814.t1.exon1;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 6534 6639 . + 0 ID=cds.g1814.t1;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 6810 8173 . + . ID=g1814.t1.exon2;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 6810 8173 . + 2 ID=cds.g1814.t1;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 8412 8883 . + . ID=g1814.t1.exon3;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 8412 8883 . + 0 ID=cds.g1814.t1;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 9209 9296 . + . ID=g1814.t1.exon4;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 9209 9296 . + 2 ID=cds.g1814.t1;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 9424 10111 . + . ID=g1814.t1.exon5;Parent=g1814.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 9424 10111 . + 1 ID=cds.g1814.t1;Parent=g1814.t1 #PROT g1814.t1 g1814 MDAHASAVPSSGAPTDSELGEKVSSLRKHEFPQLTGVAYLDHGGATIPPKSVISAHLTELSQALLGNPHSQSASSRASAARVDNARRAVLAFFNADPREYSVVFTSGCTAALKLVADCYPWESRDASDRSPVFTYATDVHNSVLGIREVAAAAGAACIPVAARDIVDASTLSHIDGLAPNKANVHDNRGNCNEKGFGLEEERDAEGASLRGRVGLFAMTAQCNFSGFRHDLSLVNRLCDGSASLRGVPHGRWHVLLDAAALTGTGRLDLASCSADFVSVSFYKMFGYPTGLGALLVRADAARVLRKRYFGGGTVAASVATDMFRVFREDTSARFEDGTVSFQAISALPGAIDFFNRELGGIAAVSRHVSFLAEHMRARLRVLAHWNGRPVVVLYDRSSPETARSPLPTDSLRDSSAQGVGEVSHKDAPGVHGGVVTFNILRADGAFVGYSEVEKLAALVDVHVRTGCFCNPGACQEFLGLTSDDIRRNLEAGHLCWDDNDIIRGKPTGAVRASLGMSSSIDDVRRLIRFVEEYFAEKRAVPPSQETVASHALTGAPTCTRSPCPASSMAASRIVGTVDGILLYPIKSCGAFEVDSWPIGEKGLLFDREYMVMDAAGGGCVTQKHEPRMCLVRPKIDCDADVMEVSAPGMPVLRVPLQSSGEPSVDATLCNARVCGDKIRGVDCGREAAAWMSTFLGRDCCLVRQLPTDVRECRLSQPSMTEPSSATPSSSTLLDAAAPLSVEGNARRDSASVHKSEDNYTGGAAAEVRKQSLSLSNESHFLMVSRESVRALNDLIRAEAASCNGEGGLSGMPRDIPAEQFRPNIILAPADELTSLPLSTADVISDCGVLVPFEEDSWTDLSIESGLSVSLRAMGPCNRCRMVCIDQTTGENSKEPLRTLAMHRRAQ # ORIGINAL: g1813.t1 original gene structure, not modified by PASA NODE_1589_length_10322_cov_42.3407 AUGUSTUS gene 3559 5825 . - . ID=g1813;Name=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS mRNA 3559 5825 . - . ID=g1813.t1;Parent=g1813;Name=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 5658 5825 . - . ID=g1813.t1.exon1;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 5658 5825 . - 0 ID=cds.g1813.t1;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 5363 5525 . - . ID=g1813.t1.exon2;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 5363 5525 . - 0 ID=cds.g1813.t1;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 5050 5137 . - . ID=g1813.t1.exon3;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 5050 5137 . - 2 ID=cds.g1813.t1;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 4560 4811 . - . ID=g1813.t1.exon4;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 4560 4811 . - 1 ID=cds.g1813.t1;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS exon 3559 4237 . - . ID=g1813.t1.exon5;Parent=g1813.t1 NODE_1589_length_10322_cov_42.3407 AUGUSTUS CDS 3559 4237 . - 1 ID=cds.g1813.t1;Parent=g1813.t1 #PROT g1813.t1 g1813 MAGDMANPHLGGFPDLKDDPMLSADAHYVTPGMPDLDKVKPGDWVDILGNGLLRKQLLKRGRGKRTMPRDGDKVTIHCFGSLKKDGTTFMDTRKDNAPLSFWLGEGEVPWGWDIGLPLWEEGEVARLASDHTYGYGDAGLPPSVPPKTWVDFEIELVSVERRPVFGEMSAADRIAYAKSKRTHGKKQFADRDPDAAAASFALADIMFQRASAVVLKNRLEELRRIKDTPAAKTEEGDDHTRMAATLEAAFPGMGDLGRMIAQGPGGAATDETGAGGLLTPADRRVWVSCLNWLTRVRLDMKMNDGARDASSRAMLLDPKNPKTLAQAAWLLITLGDNMAAAMQAIRALHIKPECSAAKKVVDELEVTAPGDVKDARAEFKRVLAREKKEAKAERDAELGRGGIPFKMILLALVFAALSVVAALYLNPSAGGFPISGGGQRIRTNQRFTA* # ORIGINAL: g6541.t1 original gene structure, not modified by PASA NODE_1074_length_14192_cov_41.1211 AUGUSTUS gene 1546 2790 . - . ID=g6541;Name=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS mRNA 1546 2790 . - . ID=g6541.t1;Parent=g6541;Name=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 2701 2790 . - . ID=g6541.t1.exon1;Parent=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 2701 2790 . - 0 ID=cds.g6541.t1;Parent=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 2259 2481 . - . ID=g6541.t1.exon2;Parent=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 2259 2481 . - 0 ID=cds.g6541.t1;Parent=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 1546 1937 . - . ID=g6541.t1.exon3;Parent=g6541.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 1546 1937 . - 2 ID=cds.g6541.t1;Parent=g6541.t1 #PROT g6541.t1 g6541 MNACDAQLFVREAIASVAESHGLVAVFLPKYFRNAAGNGCHMHVSITDMAGSNVIEGAGLHGMSSAGEHFMAGVLAHLPALCAVLAPSKNSYDRLVPQAWSGAYACWGEENREAAIRTAAPPGGGGGITNFEIKAMDATANPYLAVASAITAGVDGLTRKLSLPAPINADPAMMAAEERAERGIVALPSSVSDAVDALVKDAVVGEAFGVPFLKAFVAVRRAEAHGPDPSMLTY* # ORIGINAL: g6543.t1 original gene structure, not modified by PASA NODE_1074_length_14192_cov_41.1211 AUGUSTUS gene 7039 12274 . - . ID=g6543;Name=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS mRNA 7039 12274 . - . ID=g6543.t1;Parent=g6543;Name=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 12182 12274 . - . ID=g6543.t1.exon1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 12182 12274 . - 0 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 11673 11883 . - . ID=g6543.t1.exon2;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 11673 11883 . - 0 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 11400 11507 . - . ID=g6543.t1.exon3;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 11400 11507 . - 2 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 10378 11147 . - . ID=g6543.t1.exon4;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 10378 11147 . - 2 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 9074 10073 . - . ID=g6543.t1.exon5;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 9074 10073 . - 0 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 8485 8809 . - . ID=g6543.t1.exon6;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 8485 8809 . - 2 ID=cds.g6543.t1;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 7039 8326 . - . ID=g6543.t1.exon7;Parent=g6543.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 7039 8326 . - 1 ID=cds.g6543.t1;Parent=g6543.t1 #PROT g6543.t1 g6543 MFRKLGKNPHRRLADSDDEEVGESHELHGVDDDLRGEEDSFIGGGADSSQASLNRFDWDDGGESSAHGASSGKASRDGSGKRITPAERRRREREAHDKMVMESIPKWKRIALGVGTVCVLLGIFVGVSIYNSLDDNEAVPPAPADSIIATPTGVDVVTSLASVVQTSIFASSLPPLTVAPVVSASTAIQSASSLSVSVVSESAVVSSSLSSSADVASSSGVPSTTVDEAPVVTSSSAGSDSASITTLRDASVSVLSSSLAPLSSTLAPIESSSSADVSSSQPPSPTALSSSADVSSASPSATAASPTVEPPEVVSLGEVTKSPTDPRLVRLARHVSGMSMLLVSDPRTKAAAAAVSVAAGSFDDPTDAPGLAHFVEHLLFMGTQKYPGVDDYDQYISQNGGTMNAYTEDEGTTYFFQVNADALGGAIDRLAQFFIAPTGFRADSVEQERKAVESEHAKNKSNTFRRFYQLFKSLAVEGSPFSKFGTGDEASLSSPDILDKLKSFFDTNYVPSKLSVVVAGPQSLDDIEAAVVSAFRGIEKRAPLSTAPARASRKTRRSAKARDAPPFPALGKTMNADVVGSDTLLVAWPTSLTTRDHTTHALDYLSFFLGHESDGTALAVLKEKGLATQLSTFTEEFSSFSNVYAVVTLTPAGLEQWKDVAATVFTYARKVVNGHEERYEEFVDTMAIGYNFPKAERPGDACLALASNLRRTADPTLVLDGPTAYVKDPASFNTLLASIVPSNAVVIVGSASFDLASLPSTEPWYGTHYELADIDGELMLELLEDVSGVALPAPNSFVPPIDTALVEMPSNATGMPQEVVHSRFLHGFHAMDPAFREPYLSVHVFLGSPSVSKTVRSRALADLLAGVAMASAKSTLYFASVAGIHASVRALAGGIEIVASGISPSTITSIAVMLAEDLARCSTAPASPSYAVANETLRQTYREALVAQPFMQGIGQARQIVYGYATDASLLAAYTASTTADFTTFCEDFVRSVHVVGLTYGNLETSESISLFNDIRAMFGSEGASAEAFAQSVARVDDKNYAFRATNAIPSDVNSAVVAYYEHGPMNAEGSSWGASRARLGLAGAILAQRAFDELRTQQQLGYIVLLRDMIAYSVGGVALVVQSGTQSPEAVSTAMDAFAEMAAAYVASLDVPSFSSWVRSRIVTLRAGEETLVDAGRRRWQETVNMEPYGVREAEIAELEKLTHDDFVAYIAGLFAHRLSVRVYGEGSAIPGGNPVDGSSLITDAVAFYAAASKYLFDDPRTR* # ORIGINAL: g6542.t1 original gene structure, not modified by PASA NODE_1074_length_14192_cov_41.1211 AUGUSTUS gene 3101 5916 . - . ID=g6542;Name=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS mRNA 3101 5916 . - . ID=g6542.t1;Parent=g6542;Name=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 5750 5916 . - . ID=g6542.t1.exon1;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 5750 5916 . - 0 ID=cds.g6542.t1;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 4664 5519 . - . ID=g6542.t1.exon2;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 4664 5519 . - 1 ID=cds.g6542.t1;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 3804 4445 . - . ID=g6542.t1.exon3;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 3804 4445 . - 0 ID=cds.g6542.t1;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 3524 3667 . - . ID=g6542.t1.exon4;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 3524 3667 . - 0 ID=cds.g6542.t1;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS exon 3101 3265 . - . ID=g6542.t1.exon5;Parent=g6542.t1 NODE_1074_length_14192_cov_41.1211 AUGUSTUS CDS 3101 3265 . - 0 ID=cds.g6542.t1;Parent=g6542.t1 #PROT g6542.t1 g6542 MDAVIAAALARIPLIDHHCHGLDRPSHISNTPMVAAFSEAVGLDALAHAATSLPYMRSIRQIANVLECEPSEAAISLVRSTIPHEAYASRLVSATNTAVALIDDGFGSASAHPIAWHSTSGIFPCVRRVVRIETEAEEVIAGIARDPTVTDLGDSELVSVFDARLASALLAATRDDCAEPCMRGVAFKSIAAYRTGLDIDVSPSTVGPMAAVVRGAKDAADAGGRFRLSQKWLVDRVFMCALAIASQKRLPVQIHTGFGDTDLRLEMSDPLHLRHVLECRQYRDAPIVLLHAAYPFHRNAAYLASVYPHVYVDFGLANTHLSTRGLKEVVSGLLEQCPTSKILYSSDGHALPETFFCAATNTRTVLVSCLAASVDDGDLTLTQAIEVGKQILSGNATRLYRLESLVPSIQQQQQQQQQQQQQQQQHGHPAQLQRQHSHTSVDLTRTKKPLAISGSADVILPTGVKMIRVAWWDAGGVRRCRVVPATRFTSVVAHEGVGVTQALMAMPAYADCVIADSGLSPVGEVRLIPQLSTLRRLPNAPTQALVAADMMVAGKEWFACPRAALRRAVSKLNALGFDARIGFENEFLLLRKDAGGKYEPVDNAIYCSSSAFSAVAPVIEAIVDWLNAAGYTVEQVHKESAPGQYEARDFHCASRRL* # PASA_UPDATE: g6540.t1, single gene model update, valid-1, status:[pasa:asmbl_281,status:12], valid-1 NODE_1074_length_14192_cov_41.1211 . gene 104 951 . + . ID=g6540;Name=g6540.t1 NODE_1074_length_14192_cov_41.1211 . mRNA 104 951 . + . ID=g6540.t1;Parent=g6540;Name=g6540.t1 NODE_1074_length_14192_cov_41.1211 . five_prime_UTR 104 104 . + . ID=g6540.t1.utr5p1;Parent=g6540.t1 NODE_1074_length_14192_cov_41.1211 . exon 104 951 . + . ID=g6540.t1.exon1;Parent=g6540.t1 NODE_1074_length_14192_cov_41.1211 . CDS 105 887 . + 0 ID=cds.g6540.t1;Parent=g6540.t1;5_prime_partial=true NODE_1074_length_14192_cov_41.1211 . three_prime_UTR 888 951 . + . ID=g6540.t1.utr3p1;Parent=g6540.t1 #PROT g6540.t1 g6540 GGDICLGYALLRFVFPTVGEHEVPGQYDMRMNPLTETMAATASNNMRNKPGSQAVCSNDPEKVGYMSPCAWRDSQSDRLYADDAWATPGVKYVRGNRDCVFSERIHESCEYRFSDWAPRRATDAYDDVWLVSDGLCGSTCAVFSSFVQMRGLGKTVVMGGSEKISDMQFFSFPGGEVEDVAYVSKLAAQYGVTGDLVPEDFPNGAIFRFAIREIYPWDGKDSAPLEFRHVPATHHLHYDQPFDNVDAIYEQLSKLWTAEQ* # ORIGINAL: g2884.t1 original gene structure, not modified by PASA NODE_7488_length_433_cov_94.8101_potentialcontaminant AUGUSTUS gene 1 296 . - . ID=g2884;Name=g2884.t1 NODE_7488_length_433_cov_94.8101_potentialcontaminant AUGUSTUS mRNA 1 296 . - . ID=g2884.t1;Parent=g2884;Name=g2884.t1 NODE_7488_length_433_cov_94.8101_potentialcontaminant AUGUSTUS exon 1 296 . - . ID=g2884.t1.exon1;Parent=g2884.t1 NODE_7488_length_433_cov_94.8101_potentialcontaminant AUGUSTUS CDS 1 296 . - 0 ID=cds.g2884.t1;Parent=g2884.t1 #PROT g2884.t1 g2884 MDFLWPDHAPHSASVVPVPAAVPAPAPAGARRSSRAQEPRNQLHAEVSKTSHLQVLRVDGSQAPAIFLFISFAKCPSSPLTGLKYDNLRVVYREHLEK # ORIGINAL: g5460.t1 original gene structure, not modified by PASA NODE_1077_length_14149_cov_44.9859 AUGUSTUS gene 5288 9183 . - . ID=g5460;Name=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS mRNA 5288 9183 . - . ID=g5460.t1;Parent=g5460;Name=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 8654 9183 . - . ID=g5460.t1.exon1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 8654 9183 . - 0 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 8316 8486 . - . ID=g5460.t1.exon2;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 8316 8486 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 7789 7959 . - . ID=g5460.t1.exon3;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 7789 7959 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 7372 7455 . - . ID=g5460.t1.exon4;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 7372 7455 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 7064 7147 . - . ID=g5460.t1.exon5;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 7064 7147 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 6657 6747 . - . ID=g5460.t1.exon6;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 6657 6747 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 6408 6492 . - . ID=g5460.t1.exon7;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 6408 6492 . - 0 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 6079 6154 . - . ID=g5460.t1.exon8;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 6079 6154 . - 2 ID=cds.g5460.t1;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 5288 5846 . - . ID=g5460.t1.exon9;Parent=g5460.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 5288 5846 . - 1 ID=cds.g5460.t1;Parent=g5460.t1 #PROT g5460.t1 g5460 MTGPQYPRVEADAAMSLFTVPDDVFIDNVIFKHLTLTDVGRLATCCKALRNFARRNWGRLKETYESQTQEDESDDAVYARGRDMPSSSSTFSGLRRGCGSSPALGVLDKQASRDATPPPKYIPYSKWTPESSAKAGHWDVYAMLLADGIAVGDPYRVAAAAARDGQADVLKNLYVGRRPGMSLGRDLVDNAASNGHTACVAVLTEVGEPATASAMDLAASHGHISTLKWLHLNRKEGCTSLAIDGAARSGHMDVVQWITLNIPKLTATKAAMNFAAGNNHMDILVWLHANRREGCTHTAMDEAAKRGFLEVVQWLHVHRKEGCTHLAMDLACANAHLPVVLWLHYNRTEGCSTDAMDFAAERGHIAIVEWLHSNRREGCTERAMDAAARNGHLHVVKWLHENRMEGCTPSAMDMAAAMGHLHIVQWLHEHRREGCTRNAMDAAAAAGHLEVVVWLNEHRLEGCTQRALRGAIASGADAVARYLVEKARVVPPTAVPIVTALPPPAHNNASNFPAGSRFTTNRGGGGGGIGMSAARSLPPNGARVPAGLGARQNAPLLQQNQRQQQQQQQQPLPPFVFALVNNHVIDDDVIDLARFHGHTALAEWLSTIARASMVMR* # PASA_UPDATE: g5461.t1, single gene model update, valid-1, status:[pasa:asmbl_293,status:12], valid-1 NODE_1077_length_14149_cov_44.9859 . gene 9569 12888 . - . ID=g5461;Name=g5461.t1 NODE_1077_length_14149_cov_44.9859 . mRNA 9569 12888 . - . ID=g5461.t1;Parent=g5461;Name=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 12631 12888 . - . ID=g5461.t1.exon1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 12631 12888 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 12107 12346 . - . ID=g5461.t1.exon2;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 12107 12346 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 11676 11954 . - . ID=g5461.t1.exon3;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 11676 11954 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 11334 11511 . - . ID=g5461.t1.exon4;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 11334 11511 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 11085 11114 . - . ID=g5461.t1.exon5;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 11085 11114 . - 2 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 10845 10912 . - . ID=g5461.t1.exon6;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 10845 10912 . - 2 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 10655 10711 . - . ID=g5461.t1.exon7;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 10655 10711 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 10347 10454 . - . ID=g5461.t1.exon8;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 10347 10454 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 10074 10171 . - . ID=g5461.t1.exon9;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 10074 10171 . - 0 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . exon 9569 9874 . - . ID=g5461.t1.exon10;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . CDS 9727 9874 . - 1 ID=cds.g5461.t1;Parent=g5461.t1 NODE_1077_length_14149_cov_44.9859 . three_prime_UTR 9569 9726 . - . ID=g5461.t1.utr3p1;Parent=g5461.t1 #PROT g5461.t1 g5461 MTVSSLTIVVFGASGDLAKKKTYPAIFGIFKNNLLPPGTTIVGYARSNLTNAAFREQIGSYLGGNSDVRDNFLDLCHYVAGDYDTKAAYENLLHEMKHFETENQRNRVFYLALPPSVFIPVARRIKENLMSTNGFNRVIIEKPFGKDLASSAELANALAQQFREEEMFRIDHYLGKEMVKNIIILRFANVFYSAIWNRQWVNNVQITFKEPFGVEGRGGYFDEFGIIRDVMQNHLMQILALIAMERPVNLDGESIRDEKVKVLRCIRPVEMRDMVIGQYVASADGTKKGYLDDQGVPAHSITPTFAVASVYIGNERWDGVPFVLKCGKALNERKAEIRIQFNDVPGSLFKDLARNELVIRVQPDEAVYMKVMNKEPGSVGMETTISELDLSYKQRYSNRYLPEAYEALILDVIRGDHGNFVRSDELEAAWQIFTPILHALERQKIKPEPYEYGSRGPQSADDFVQHVGKYHRAKKAYEWKPHTPQKL* # ORIGINAL: g5459.t1 original gene structure, not modified by PASA NODE_1077_length_14149_cov_44.9859 AUGUSTUS gene 3667 4588 . + . ID=g5459;Name=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS mRNA 3667 4588 . + . ID=g5459.t1;Parent=g5459;Name=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 3667 3779 . + . ID=g5459.t1.exon1;Parent=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 3667 3779 . + 0 ID=cds.g5459.t1;Parent=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 3963 4059 . + . ID=g5459.t1.exon2;Parent=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 3963 4059 . + 1 ID=cds.g5459.t1;Parent=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 4439 4588 . + . ID=g5459.t1.exon3;Parent=g5459.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 4439 4588 . + 0 ID=cds.g5459.t1;Parent=g5459.t1 #PROT g5459.t1 g5459 MHILISTVGQALRHNPYAPVVPCHRVISTDHFIAGFYGQWGAGPNIDRKKDILRREGLAFGSDGKLVTKSSNVDPIFTGFVALNDKQLATFQTEMEGHVEHNLAALSSNNDNNTLACAC* # ORIGINAL: g5458.t1 original gene structure, not modified by PASA NODE_1077_length_14149_cov_44.9859 AUGUSTUS gene 222 1741 . - . ID=g5458;Name=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS mRNA 222 1741 . - . ID=g5458.t1;Parent=g5458;Name=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 1505 1741 . - . ID=g5458.t1.exon1;Parent=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 1505 1741 . - 0 ID=cds.g5458.t1;Parent=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 721 1364 . - . ID=g5458.t1.exon2;Parent=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 721 1364 . - 0 ID=cds.g5458.t1;Parent=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS exon 222 372 . - . ID=g5458.t1.exon3;Parent=g5458.t1 NODE_1077_length_14149_cov_44.9859 AUGUSTUS CDS 222 372 . - 1 ID=cds.g5458.t1;Parent=g5458.t1 #PROT g5458.t1 g5458 MDASSADGEADRARALLVSLGELHTRMHAATSACDYVKLFGVLSELSMTPVTVDALRESQIGKTVNSLVKCKDAAMSPQVRALAAELVSTWKKLVAQTGAVPANPVGSATSPQSTTTTPTITTATAAATTAATATSHPAIQPTASPPNAVSSTGSGGSSPIITTRQSLSSILRNGGRVSHIQAPAMHSAADDGVDVTGDLNAGARSQATGCHGLIALKSPEKRASVITNPDASTAEDMHAGAEAVDGGKRKDAADVMGVRATVTRKKMGVVGSNLAHDLSSAQRTTQLADGACRVPKLLTLAQMVIARNVDHLDYVGHVPVELLKPALSRCGAEQLLHLEECNP # ORIGINAL: g13062.t1 original gene structure, not modified by PASA NODE_1291_length_12369_cov_46.8912 AUGUSTUS gene 3392 4876 . - . ID=g13062;Name=g13062.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS mRNA 3392 4876 . - . ID=g13062.t1;Parent=g13062;Name=g13062.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 3392 4876 . - . ID=g13062.t1.exon1;Parent=g13062.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 3392 4876 . - 0 ID=cds.g13062.t1;Parent=g13062.t1 #PROT g13062.t1 g13062 MKTVPEGNAFLAEDYCAAVKEACDLLSADGAGHGLSPSTSDSSQSKHTHHLGISVLADALEDGWSLVAPVLMSLEADVRDALSTPSPLPTMQQTRVGDYLYSLLRAVGGGSTLRAPSKVCAQQLHIAHLINALGYALQTCVPVANLLSGAPVSTNHTPSHKDNDFFNRSESLGKRPERHVALGVARDSGELRDESSRLIVQNPLESGGVATTVGDIRRESPPLDVASRRRRSLRLIAKGELDTVGSPRLTERMLSRWTMALKALAKACAAGSAASAPGMFLFSKRSFESRRKAMSEAIRAVSASVHFEVERSDVLATSISHLARMSRATKLSGVSFHGEKGGGIGVIRGWFTSFGQALLERNNSERQAIANSLVGQAQAEGEVTSTGESASAGKIHVPAIGEPSPLLVPSEVPGTIVPLAIGEDAWTPALQIAYECVGKYLGLAIINEAIVPVVVARPVLRYLIGRQLHMTDLALGLTLTPWVNLTHQRAPQTY* # ORIGINAL: g13064.t1 original gene structure, not modified by PASA NODE_1291_length_12369_cov_46.8912 AUGUSTUS gene 7581 11479 . - . ID=g13064;Name=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS mRNA 7581 11479 . - . ID=g13064.t1;Parent=g13064;Name=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 11160 11479 . - . ID=g13064.t1.exon1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 11160 11479 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 10636 11041 . - . ID=g13064.t1.exon2;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 10636 11041 . - 1 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 10425 10531 . - . ID=g13064.t1.exon3;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 10425 10531 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 10271 10319 . - . ID=g13064.t1.exon4;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 10271 10319 . - 1 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 9947 10072 . - . ID=g13064.t1.exon5;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 9947 10072 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 9644 9837 . - . ID=g13064.t1.exon6;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 9644 9837 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 9411 9513 . - . ID=g13064.t1.exon7;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 9411 9513 . - 1 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 9134 9311 . - . ID=g13064.t1.exon8;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 9134 9311 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 8595 8951 . - . ID=g13064.t1.exon9;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 8595 8951 . - 2 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 8255 8385 . - . ID=g13064.t1.exon10;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 8255 8385 . - 2 ID=cds.g13064.t1;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 7581 8111 . - . ID=g13064.t1.exon11;Parent=g13064.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 7581 8111 . - 0 ID=cds.g13064.t1;Parent=g13064.t1 #PROT g13064.t1 g13064 MVKKGIEIFARIKPTKNAYNGFQIEEPSELSTDTQSTRIQFHVKREASEGIVNNKKETYKFKFNHIFKPDATQDQVFDVMAKKVILSVLQGYNGTIFAYGQTGSGKTFTITGGAERYADRGIIPRSLSFIFSEFAKRTNMVFTAHVSYMEIYNDNGYDLLDPNHEIKDIEDLPKVALMEDEGGNVTLKNLSTPQATSEEDALNLLFMGDTNRMIAETPMNLASSRSHCIFTVHIAAREAHSEVLRRSKLHLVDLAGSERIGKTNVEGKLLSEAKYINLSLHYLEQVIVALGEKADGKRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSVEQKNVDESISTSRFAQRVALIANDAQLNEELDPSLVIARLKREVQQLRDELALATGGDADRGPLTQDDIDQCRALVTRFVEDRDPEGVINLGDMRKIQECFRQLRTMIYDRPVGGSSDGAAAAPNALATIANPGPSTAAALEGPDSETKVRRLTDLLHQRDNEINILVEMLKKKKAQDGASASGPSSLSQLQRGTAAAQPSYAQYTQQPNIPAAAALSVDRQLAGPPGPSHAMPFVDRGKAFEIFKSKYPHNSAIHENKVALKAMYTEAKSLGERVNEARTKINHLKSTIERLRVDKAMQGLSSGDVPDRDEERMRSHIEDEKAAYKDNFERLRGLKTEIEHVQHILEKQRIKMEKDFERWFTDVNGYAPPPPAPVAVPPQRPPQDRTSQGRMDMSAPAPGPTPHAAWRTPPAGHPISGGASGGPPTGYATVQSGTTHPPASNYQVRQQTSQPGLHGGQGSTLAGQPRPPPAAGAPTLTGDSRTDADIIAFYRAKESMMKTKR* # ORIGINAL: g13063.t1 original gene structure, not modified by PASA NODE_1291_length_12369_cov_46.8912 AUGUSTUS gene 5412 5699 . - . ID=g13063;Name=g13063.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS mRNA 5412 5699 . - . ID=g13063.t1;Parent=g13063;Name=g13063.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS exon 5412 5699 . - . ID=g13063.t1.exon1;Parent=g13063.t1 NODE_1291_length_12369_cov_46.8912 AUGUSTUS CDS 5412 5699 . - 0 ID=cds.g13063.t1;Parent=g13063.t1 #PROT g13063.t1 g13063 MGRTPLFRALINGNCGLAATIVKQFNSADALAVTSKCVDALANNVLHVMFAFVSENSKDVGALAVARAMLSATDDKHRQAAFSQANMVGLASPLD* # ORIGINAL: g685.t1 original gene structure, not modified by PASA NODE_2710_length_5377_cov_45.0285 AUGUSTUS gene 1468 4761 . + . ID=g685;Name=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS mRNA 1468 4761 . + . ID=g685.t1;Parent=g685;Name=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS exon 1468 2220 . + . ID=g685.t1.exon1;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS CDS 1468 2220 . + 0 ID=cds.g685.t1;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS exon 2775 3917 . + . ID=g685.t1.exon2;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS CDS 2775 3917 . + 0 ID=cds.g685.t1;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS exon 4059 4223 . + . ID=g685.t1.exon3;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS CDS 4059 4223 . + 0 ID=cds.g685.t1;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS exon 4402 4761 . + . ID=g685.t1.exon4;Parent=g685.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS CDS 4402 4761 . + 0 ID=cds.g685.t1;Parent=g685.t1 #PROT g685.t1 g685 MAVATLPEFAGPNSARMSTYQGDLRRPDRQRTSPGVSQRPGVYNGLTGPSYTLPGDQFRFNLPPTDVLRPNLDMPAGEIDTWPARSAGAKPMQANDPEEDKTKPKPRFLQQLESYIERELELLECPREGPSDQRLQVYREVFRYLIEDFKTYKPLLSAIKNEYELVVESQTEQLQLLQPLQSRLSTVQQEVEQRIGGIRREHSREIQSHKEANARLQEKVLELSERADELKVQVDKLSSELTNEHGLYLEQVEARKMLVSQVHQLEQYKAEKEHDDARIQHNWQRMEAQLQRIRLDHQTAMRENKSLRDTLADVVPRADFDAAEAKGARLDAELKSVKTMYASLVDQHHAVTDMLKSLTAERENAKGTTTPRPDFDVCGDFVRGGREWWDKNAHGRSTKEQLDIVAREFEALYNEAHGKFQSTNEDFFEGLGTGPTVPKYLRHLGKVKNRRMQKRDTEILIKEIWADKIAHEAKNKREQLDNFLFAFLQRKYGTPVLAIEWGYNLHDACQRFLYDADIELFFRILTGDLDEEVYHNQMAMIEKLKNAFARLDIGGGNGGKEGIAPSVSSTSVGKGPGKGRLLKRDLMDALRKFFPFRSDKLLQELEDALNEDQPGEYADYRTLFSEDKDGNQGAFAEELRDQHIKERIDYVRDIEEAVHHLYPHVEEITVEQAKEAVLSFDTNKPPKELQQYLARGFGLPLEQLNPDSTVALNLFVKRLQSGMVRRSTKKGGEEGAAHSEDRPTSSAETRKHPASARSSRSVDNRDDEDSKRAKSPGTGGRKSPSAGPGGRKSPATGRRTPSRADE* # ORIGINAL: g684.t1 original gene structure, not modified by PASA NODE_2710_length_5377_cov_45.0285 AUGUSTUS gene 165 405 . - . ID=g684;Name=g684.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS mRNA 165 405 . - . ID=g684.t1;Parent=g684;Name=g684.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS exon 165 405 . - . ID=g684.t1.exon1;Parent=g684.t1 NODE_2710_length_5377_cov_45.0285 AUGUSTUS CDS 165 405 . - 0 ID=cds.g684.t1;Parent=g684.t1 #PROT g684.t1 g684 MTWRWRRSRQRSTKLAAIDQVEVALLNAGNAPDDIAYLRKKKSYLRQEEILLLQKENLLREKRLQLRRTSRSSNQVQWAP # ORIGINAL: g10815.t1 original gene structure, not modified by PASA NODE_2012_length_8102_cov_39.6346 AUGUSTUS gene 2923 3567 . + . ID=g10815;Name=g10815.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS mRNA 2923 3567 . + . ID=g10815.t1;Parent=g10815;Name=g10815.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS exon 2923 3567 . + . ID=g10815.t1.exon1;Parent=g10815.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS CDS 2923 3567 . + 0 ID=cds.g10815.t1;Parent=g10815.t1 #PROT g10815.t1 g10815 MADTPPRNVGGGRRGPLRPRVRDVGGTGSTGRGPAVTDALPRPWAGQPALPGHGRPFWLTADARAAVDGNCAGSAPSGPVAVGAAATVENLARANSRPGSGVAPNQTRGTVNAGAEGLGADVGFGDAREFADIRSLLTILPIRQRPLAPRPTGHNTSRFDGDNLHRPEQGAAMQQPATDSGDLNAGGESAVASGNLVRPQQHTVFRIRRDCHDE* # ORIGINAL: g10816.t1 original gene structure, not modified by PASA NODE_2012_length_8102_cov_39.6346 AUGUSTUS gene 4252 5926 . + . ID=g10816;Name=g10816.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS mRNA 4252 5926 . + . ID=g10816.t1;Parent=g10816;Name=g10816.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS exon 4252 4623 . + . ID=g10816.t1.exon1;Parent=g10816.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS CDS 4252 4623 . + 0 ID=cds.g10816.t1;Parent=g10816.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS exon 5282 5926 . + . ID=g10816.t1.exon2;Parent=g10816.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS CDS 5282 5926 . + 0 ID=cds.g10816.t1;Parent=g10816.t1 #PROT g10816.t1 g10816 MRTSTIPEVLFDSAHIARLIDLCGFGPRLANAGNDGNDEYDVDDGPFLMLLLAFQLNGLDAAKASGDRQRISVAEKIVALVSEMSDALSVDPSSVEPPATVSASADIQPSSGAAPKSDYKSQAEIAPARMAVIGQINECCSTGILEQDAADAVVAEAARTGEGLTMATPGTGCGAMAATQMGTTAPGPAELADASTVRRNEPSHNTLRTRPAKDPTSTTAAPAVTLPPTPAAAQLAAAAPWPMHHPQPTQQQTRPNAKDILRARMPDVFGEIDRRTNKAATRKRMRNCADAISDDEAYFRDVGVKGRGKEFDRMRDRSDNSDAVQTVAAAVILLLFQG* # ORIGINAL: g10817.t1 original gene structure, not modified by PASA NODE_2012_length_8102_cov_39.6346 AUGUSTUS gene 6357 8020 . + . ID=g10817;Name=g10817.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS mRNA 6357 8020 . + . ID=g10817.t1;Parent=g10817;Name=g10817.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS exon 6357 7143 . + . ID=g10817.t1.exon1;Parent=g10817.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS CDS 6357 7143 . + 0 ID=cds.g10817.t1;Parent=g10817.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS exon 7245 8020 . + . ID=g10817.t1.exon2;Parent=g10817.t1 NODE_2012_length_8102_cov_39.6346 AUGUSTUS CDS 7245 8020 . + 2 ID=cds.g10817.t1;Parent=g10817.t1 #PROT g10817.t1 g10817 MAESLDMRFSIDVECFVVSLYGVVQRAALHGIAGTDVRVALTRLLENVKWIINVLRKHRPAVDVDAEGSCVEKRLGSIENLMRLVVIVSKDDLAAADAAATVESRRQRRHKRCHNGSQSAQQPPAASSDAALAPVDTSARVSGVQLAAYEDHETNATSPGESDGGEEDGGIESEGSPAPRRSQSPVSLPKTTADDAKRSAPRQANEPLRLEDVRNLFTAIEATVKSIERCAAVGATLAAEFGTFGRMRALLLVKGSDINYEMDIDAPGSRLDPFKWTTLLLELRGFFDFRSSANGAEPETVDGLLKINTASRDRFVFPSTTLLQRQHGSRRPEDGAPRISVTNVKSWPATHAGWFNAMCFPSDDTGCEVVVSARPAQRLRNSSSVAVPVTNVRPQGRPSVETVAHRYGEELARLGSSVGLGAYRFGVLSIRHCHFTELVSARVHEVVDAGKEPSLDEIVAHVNLECRYAVTSGIGMQHYLAGNRNMLLTAVSQKMLMLSGCELLHSVCYGFQRCNMQQCL* # PASA_UPDATE: g10814.t1, single gene model update, valid-1, status:[pasa:asmbl_3272,status:12], valid-1 NODE_2012_length_8102_cov_39.6346 . gene 203 1018 . - . ID=g10814;Name=g10814.t1 NODE_2012_length_8102_cov_39.6346 . mRNA 203 1018 . - . ID=g10814.t1;Parent=g10814;Name=g10814.t1 NODE_2012_length_8102_cov_39.6346 . five_prime_UTR 649 1018 . - . ID=g10814.t1.utr5p1;Parent=g10814.t1 NODE_2012_length_8102_cov_39.6346 . exon 406 1018 . - . ID=g10814.t1.exon1;Parent=g10814.t1 NODE_2012_length_8102_cov_39.6346 . CDS 406 648 . - 0 ID=cds.g10814.t1;Parent=g10814.t1 NODE_2012_length_8102_cov_39.6346 . exon 203 241 . - . ID=g10814.t1.exon2;Parent=g10814.t1 NODE_2012_length_8102_cov_39.6346 . CDS 203 241 . - 0 ID=cds.g10814.t1;Parent=g10814.t1;3_prime_partial=true #PROT g10814.t1 g10814 MRSVRSASGDASASLTAAALSANAGVSRATDRSLFSETRAQSLPTSQLASASAASSSSSYYGSDGGLDGYVVTAQRAKPEKYEALLKPGSNLVE # PASA_UPDATE: g13531.t1, single gene model update, valid-1, status:[pasa:asmbl_7450,status:12], valid-1 NODE_4574_length_1444_cov_40.9255 . gene 181 1245 . - . ID=g13531;Name=g13531.t1 NODE_4574_length_1444_cov_40.9255 . mRNA 181 1245 . - . ID=g13531.t1;Parent=g13531;Name=g13531.t1 NODE_4574_length_1444_cov_40.9255 . five_prime_UTR 1144 1245 . - . ID=g13531.t1.utr5p1;Parent=g13531.t1 NODE_4574_length_1444_cov_40.9255 . five_prime_UTR 625 665 . - . ID=g13531.t1.utr5p2;Parent=g13531.t1 NODE_4574_length_1444_cov_40.9255 . exon 1144 1245 . - . ID=g13531.t1.exon1;Parent=g13531.t1 NODE_4574_length_1444_cov_40.9255 . exon 181 665 . - . ID=g13531.t1.exon2;Parent=g13531.t1 NODE_4574_length_1444_cov_40.9255 . CDS 181 624 . - 0 ID=cds.g13531.t1;Parent=g13531.t1 #PROT g13531.t1 g13531 MPSTPPDLSRLSMADRAGQRLHAVIGGKITKPTSDFKSSLKPATQSRLGSLFIADLVEEARGNQSARDLLQPIACVPAVPAGAVPAAPAVVTSTGPRVAPECARILGNLLDAQAKFHPPANYLKKVQKDEITEAMRRDIVEWLHKVR* # ORIGINAL: g12416.t1 original gene structure, not modified by PASA NODE_4190_length_2043_cov_48.8608 AUGUSTUS gene 629 1935 . + . ID=g12416;Name=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS mRNA 629 1935 . + . ID=g12416.t1;Parent=g12416;Name=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS exon 629 700 . + . ID=g12416.t1.exon1;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS CDS 629 700 . + 0 ID=cds.g12416.t1;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS exon 783 863 . + . ID=g12416.t1.exon2;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS CDS 783 863 . + 0 ID=cds.g12416.t1;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS exon 1106 1305 . + . ID=g12416.t1.exon3;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS CDS 1106 1305 . + 0 ID=cds.g12416.t1;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS exon 1498 1618 . + . ID=g12416.t1.exon4;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS CDS 1498 1618 . + 1 ID=cds.g12416.t1;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS exon 1850 1935 . + . ID=g12416.t1.exon5;Parent=g12416.t1 NODE_4190_length_2043_cov_48.8608 AUGUSTUS CDS 1850 1935 . + 0 ID=cds.g12416.t1;Parent=g12416.t1 #PROT g12416.t1 g12416 MARGGPKGKQAPKQLNKNGRNRFKFMPFSERVANIKINVVHKVGTLAAQPEDADCFFAEGVMKWRELNCTGHFQAYLYEIGNNVHTLAQLIFFKDKVVDTTLKHLAVHHTMAVEPLLDLLVQIARDLRDEFYSYFPRTFAVLVKLLDTRDEQGLHDPEVIEHTFTALSYLFKFLTKYLVRDLDEVF # PASA_UPDATE: g11686.t1, single gene model update, valid-1, status:[pasa:asmbl_6670,status:12], valid-1 NODE_3876_length_2581_cov_34.7909 . gene 1176 2533 . - . ID=g11686;Name=g11686.t1 NODE_3876_length_2581_cov_34.7909 . mRNA 1176 2533 . - . ID=g11686.t1;Parent=g11686;Name=g11686.t1 NODE_3876_length_2581_cov_34.7909 . exon 2377 2533 . - . ID=g11686.t1.exon1;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . CDS 2377 2533 . - 0 ID=cds.g11686.t1;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . exon 2010 2110 . - . ID=g11686.t1.exon2;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . CDS 2010 2110 . - 2 ID=cds.g11686.t1;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . exon 1176 1739 . - . ID=g11686.t1.exon3;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . CDS 1638 1739 . - 0 ID=cds.g11686.t1;Parent=g11686.t1 NODE_3876_length_2581_cov_34.7909 . three_prime_UTR 1176 1637 . - . ID=g11686.t1.utr3p1;Parent=g11686.t1 #PROT g11686.t1 g11686 MQVAVDRKREILLTMFQAADTDGSGKIMREGLLGIFKQLGWDITKGAVNNAISMLDKDNNGTIDMNEFLDWFDFAWRYKAYDKNAETHLSKNRKDAPKHVADANEVIIRENSKESVINL* # ORIGINAL: g11685.t1 original gene structure, not modified by PASA NODE_3876_length_2581_cov_34.7909 AUGUSTUS gene 176 358 . + . ID=g11685;Name=g11685.t1 NODE_3876_length_2581_cov_34.7909 AUGUSTUS mRNA 176 358 . + . ID=g11685.t1;Parent=g11685;Name=g11685.t1 NODE_3876_length_2581_cov_34.7909 AUGUSTUS exon 176 358 . + . ID=g11685.t1.exon1;Parent=g11685.t1 NODE_3876_length_2581_cov_34.7909 AUGUSTUS CDS 176 358 . + 0 ID=cds.g11685.t1;Parent=g11685.t1 #PROT g11685.t1 g11685 ELQLVKNGAPFDVNEEIASHILKHVDINIRIDLGAGAESITYFTCDFSLDYVKINANYRT* # ORIGINAL: g2771.t1 original gene structure, not modified by PASA NODE_6827_length_505_cov_46.0116_potentialcontaminant AUGUSTUS gene 59 505 . - . ID=g2771;Name=g2771.t1 NODE_6827_length_505_cov_46.0116_potentialcontaminant AUGUSTUS mRNA 59 505 . - . ID=g2771.t1;Parent=g2771;Name=g2771.t1 NODE_6827_length_505_cov_46.0116_potentialcontaminant AUGUSTUS exon 59 505 . - . ID=g2771.t1.exon1;Parent=g2771.t1 NODE_6827_length_505_cov_46.0116_potentialcontaminant AUGUSTUS CDS 59 505 . - 0 ID=cds.g2771.t1;Parent=g2771.t1 #PROT g2771.t1 g2771 LGAVCVTSRNKWQLNEVLKEIGVKLTSEEFADATKPELCKRIQERLMHLERTADSSTTYMILPANHPDYVFPYNRHDRIAYIKKRLTEHFANSYQDYIKLKFQTSSTAITVKIEPAGTQISKEDVKVILSLRGECTGKPDGCEWSVPI* # PASA_UPDATE: g7061.t1, single gene model update, valid-1, status:[pasa:asmbl_2530,status:12], valid-1 NODE_1756_length_9362_cov_42.908 . gene 181 1232 . + . ID=g7061;Name=g7061.t1 NODE_1756_length_9362_cov_42.908 . mRNA 181 1232 . + . ID=g7061.t1;Parent=g7061;Name=g7061.t1 NODE_1756_length_9362_cov_42.908 . five_prime_UTR 181 541 . + . ID=g7061.t1.utr5p1;Parent=g7061.t1 NODE_1756_length_9362_cov_42.908 . exon 181 622 . + . ID=g7061.t1.exon1;Parent=g7061.t1 NODE_1756_length_9362_cov_42.908 . CDS 542 622 . + 0 ID=cds.g7061.t1;Parent=g7061.t1 NODE_1756_length_9362_cov_42.908 . exon 749 1232 . + . ID=g7061.t1.exon2;Parent=g7061.t1 NODE_1756_length_9362_cov_42.908 . CDS 749 898 . + 0 ID=cds.g7061.t1;Parent=g7061.t1 NODE_1756_length_9362_cov_42.908 . three_prime_UTR 899 1232 . + . ID=g7061.t1.utr3p1;Parent=g7061.t1 #PROT g7061.t1 g7061 MDSVRFSYSLNRARDHAIERERAANSKSLSTDVHIASVSPIAWGFPLFETAASKMKASAERIAVHSMLFSLFTRSE* # PASA_UPDATE: g7064.t1, single gene model update, valid-1, status:[pasa:asmbl_2532,status:3], valid-1 NODE_1756_length_9362_cov_42.908 . gene 6118 8995 . + . ID=g7064;Name=g7064.t1 NODE_1756_length_9362_cov_42.908 . mRNA 6118 8995 . + . ID=g7064.t1;Parent=g7064;Name=g7064.t1 NODE_1756_length_9362_cov_42.908 . five_prime_UTR 6118 6332 . + . ID=g7064.t1.utr5p1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . exon 6118 6480 . + . ID=g7064.t1.exon1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . CDS 6333 6480 . + 0 ID=cds.g7064.t1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . exon 6804 6860 . + . ID=g7064.t1.exon2;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . CDS 6804 6860 . + 2 ID=cds.g7064.t1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . exon 7039 7129 . + . ID=g7064.t1.exon3;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . CDS 7039 7129 . + 2 ID=cds.g7064.t1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . exon 7334 7494 . + . ID=g7064.t1.exon4;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . CDS 7334 7494 . + 1 ID=cds.g7064.t1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . exon 7916 8995 . + . ID=g7064.t1.exon5;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . CDS 7916 8640 . + 2 ID=cds.g7064.t1;Parent=g7064.t1 NODE_1756_length_9362_cov_42.908 . three_prime_UTR 8641 8995 . + . ID=g7064.t1.utr3p1;Parent=g7064.t1 #PROT g7064.t1 g7064 MVMADKSTFLTSANGTGLALALSSSAFIGASFIIKKKGLWKASQSGTRAGADGHAYLKEPLWWAGMVTMILGEIANFSAYAYAPAVLVTPLGALSVIISAILASWLLNERLHAFGKIGCFICILGSTVIVVESPDEAAIESVEEVSRAMMQPAFIVYAVLAVAVSLFLVFFVAPKHGRTNILVYIMICSLIGSLSVMACKGLGTALRLSFSGNNQFKFASTYVFAIMVGVCVVTQMNYLNKALDIFNTAVVTPIYYVTFTVFTIVASVILFNDWKGKSGNLIIAQLCGLFTIMSGVYLLHATKDFGVDGPSHSHAQSNGSPPTPHPPGLGRGNAGEYAPLRTADGNESDDGDVEIAVFEGGRKEGAAAADGNFQLTAVLADNSRRQSRGAKTV* # PASA_UPDATE: g7063.t1, single gene model update, valid-1, status:[pasa:asmbl_2531,status:3], valid-1 NODE_1756_length_9362_cov_42.908 . gene 4011 5566 . + . ID=g7063;Name=g7063.t1 NODE_1756_length_9362_cov_42.908 . mRNA 4011 5566 . + . ID=g7063.t1;Parent=g7063;Name=g7063.t1 NODE_1756_length_9362_cov_42.908 . five_prime_UTR 4011 4141 . + . ID=g7063.t1.utr5p1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 4011 4198 . + . ID=g7063.t1.exon1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 4142 4198 . + 0 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 4308 4408 . + . ID=g7063.t1.exon2;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 4308 4408 . + 0 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 4539 4640 . + . ID=g7063.t1.exon3;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 4539 4640 . + 1 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 4789 4863 . + . ID=g7063.t1.exon4;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 4789 4863 . + 1 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 4993 5122 . + . ID=g7063.t1.exon5;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 4993 5122 . + 1 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . exon 5240 5566 . + . ID=g7063.t1.exon6;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . CDS 5240 5329 . + 0 ID=cds.g7063.t1;Parent=g7063.t1 NODE_1756_length_9362_cov_42.908 . three_prime_UTR 5330 5566 . + . ID=g7063.t1.utr3p1;Parent=g7063.t1 #PROT g7063.t1 g7063 MGNCCGREAEDGGDANTVPAAPTERTHLLTDPVRNSTNVSIAGGAGRPRTNSKRGNGLSQSVGSTAYSLSRTQEEDVMSSILHGTSKTMIDVFRTSASLKKKDYADRSRVYGKIVAETHTASSASVTVFGLPQQSASAEPISFLARPVAKEDLQLIFEAAAGASEGATGIAVVPTEAFVVNFSV* # ORIGINAL: g7062.t1 original gene structure, not modified by PASA NODE_1756_length_9362_cov_42.908 AUGUSTUS gene 1387 3327 . - . ID=g7062;Name=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS mRNA 1387 3327 . - . ID=g7062.t1;Parent=g7062;Name=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS exon 3236 3327 . - . ID=g7062.t1.exon1;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS CDS 3236 3327 . - 0 ID=cds.g7062.t1;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS exon 1994 2281 . - . ID=g7062.t1.exon2;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS CDS 1994 2281 . - 1 ID=cds.g7062.t1;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS exon 1678 1765 . - . ID=g7062.t1.exon3;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS CDS 1678 1765 . - 1 ID=cds.g7062.t1;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS exon 1387 1530 . - . ID=g7062.t1.exon4;Parent=g7062.t1 NODE_1756_length_9362_cov_42.908 AUGUSTUS CDS 1387 1530 . - 0 ID=cds.g7062.t1;Parent=g7062.t1 #PROT g7062.t1 g7062 MSRSRIDMNELVSRNETLTASLAAAVEEIANHFGAHNDVDDDEVDSTDTGNGNAVNGGGLVGRMHANGIGGGGDDAGADQAGGCVQEATLNPTCITARVALVNGRIGPDFRGNGSAAAYVQPPCADGARVVKYVEVVRGREERERLNGFDCDECEKFYTSMALSDQQKKLLLKCVSRHRRMFEKPATPPGFWDIDFPPTAHPE* # PASA_UPDATE: g6932.t1, single gene model update, valid-1, status:[pasa:asmbl_6853,status:3], valid-1 NODE_400_length_24707_cov_43.4771 . gene 16498 17610 . + . ID=g6932;Name=g6932.t1 NODE_400_length_24707_cov_43.4771 . mRNA 16498 17610 . + . ID=g6932.t1;Parent=g6932;Name=g6932.t1 NODE_400_length_24707_cov_43.4771 . five_prime_UTR 16498 16545 . + . ID=g6932.t1.utr5p1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . exon 16498 16560 . + . ID=g6932.t1.exon1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . CDS 16546 16560 . + 0 ID=cds.g6932.t1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . exon 16843 16960 . + . ID=g6932.t1.exon2;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . CDS 16843 16960 . + 0 ID=cds.g6932.t1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . exon 17161 17223 . + . ID=g6932.t1.exon3;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . CDS 17161 17223 . + 2 ID=cds.g6932.t1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . exon 17392 17610 . + . ID=g6932.t1.exon4;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . CDS 17392 17468 . + 2 ID=cds.g6932.t1;Parent=g6932.t1 NODE_400_length_24707_cov_43.4771 . three_prime_UTR 17469 17610 . + . ID=g6932.t1.utr3p1;Parent=g6932.t1 #PROT g6932.t1 g6932 MATESADFKAAAEDIKKLTTAPDNNEMLKLYGLYKQGTTGDCNTDRPGMFDLKGKAKWDAWNGNKGVSSEDAQAQYVAFVGELKTKYGTA* # PASA_UPDATE: g6933.t1, single gene model update, valid-1, status:[pasa:asmbl_6854,status:12], valid-1 NODE_400_length_24707_cov_43.4771 . gene 18197 24603 . + . ID=g6933;Name=g6933.t1 NODE_400_length_24707_cov_43.4771 . mRNA 18197 24603 . + . ID=g6933.t1;Parent=g6933;Name=g6933.t1 NODE_400_length_24707_cov_43.4771 . five_prime_UTR 18197 18410 . + . ID=g6933.t1.utr5p1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 18197 18546 . + . ID=g6933.t1.exon1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 18411 18546 . + 0 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 18766 18811 . + . ID=g6933.t1.exon2;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 18766 18811 . + 2 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 18971 19082 . + . ID=g6933.t1.exon3;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 18971 19082 . + 1 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 19409 19555 . + . ID=g6933.t1.exon4;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 19409 19555 . + 0 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 19930 20118 . + . ID=g6933.t1.exon5;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 19930 20118 . + 0 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 20452 20581 . + . ID=g6933.t1.exon6;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 20452 20581 . + 0 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 20766 20842 . + . ID=g6933.t1.exon7;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 20766 20842 . + 2 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 21004 21064 . + . ID=g6933.t1.exon8;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 21004 21064 . + 0 ID=cds.g6933.t1;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . exon 21230 24603 . + . ID=g6933.t1.exon9;Parent=g6933.t1 NODE_400_length_24707_cov_43.4771 . CDS 21230 24603 . + 2 ID=cds.g6933.t1;Parent=g6933.t1 #PROT g6933.t1 g6933 MTESKMPQANTTNMFLTRALQKILGEKETKRAQHLNLREACEHALADIKHDIEANEGKGQTESSAINYSNADKYFRPFELACQSKNPRIICTSLDCLQKLIAYGHLRGSTYDEADPSKRLLDFVIDTICNCFVGDQTDEGVQLQIIKALLTAVTSSACEVHEGALLKVVRTCYNIYLASRNLVNQTTAKATLTQMLNVIFQRMENQAAQKTDDAQASSQAAVDVPPVAAPSTNGDAASHDTDADADSRTDVQTEGDEDANSVEVMHDALSEQPAAGDAETPKETPPVDASEAGKYGFCIVCAKPANHYCAQTKQPVCGIECKRKYIEQVESQAPAPTTDADEGTAPEETTAQPPAQAPAAPAPVAAPAPTPTPTPTPAPVASLSSQSSRDADNGFADNLSKSYSDLGLNKDDLGNVGHFPHILQKDAFLVFRSLCRLSMRAITDAAQQDSKSHELRSKVLSLELLLSILQNSGPVFQTSDTFVNAIKQYLCLSLSKNGVSPIPGVFELSLAIFLTLISLYKGYLKTQIEVFFKDIFLNILETASSSFQHKWMVMQALSKVCADPQTVVDLFINYDCDLDMENIFERLVNDLSRIAQGRQSTELGGTPAQEQSMKTKGLECLVHILRSMVVWSNQMQAAERPELSTMLAQNAAEEPALDADAEGAAVANASAMATPTKTDLPEQLEELKQKKEILVRGFVRFNQKASKGIKYLQENGVLGTRPEDVAEFLHANDRLSKGQIGEFLGEGDKYTIDVMYAYVDLLHFAGLSLVEALRRFLEGFRLPGEAQKIDRLMEKFAQRYIANNPGNGIFANADTAYVLAYSIIMLTTDLHNPQVKKKMTKGEFVRNNRGINDSKDLPLEYLESIYDEIANRGIQMRGEKTMYKPTIAELANEKQRKEIYSKEMEVMLETAQAQLKDGSRATTFTTATRIEHIRPMFKVAWTPTLAAFSVTLKNTEDPPVVTLCLDGFKCAIRVSAIFYMELERDAYVQSLAKFTRLSSSGGPADMKPKNIETIKCLISIAHTEGNYLQRSWHHVLKCISQLEMAQLIGTGAKGNSALMQPDGRGGAGPNASGAGVSSSSMGGGRKGGVGSVSSERSVRPSVSSGMTVGERSTRRLSGNSETSVRGANGERLQSLQDTMGETSSQSIMVAVDRIFTGSVALRGDPIEEFVRWLCAVSLDELQSPQHPRMFCLQKIVEICYYNMGRIRLEWSRIWAIIGEYFNKVGCLPNLDVAMFAIDSLRQLSMKFLEKQELPSYHFQKDFLKPFEYIMNHNKSASIRDMVVRCLAQMVQSKAKNIVSGWKNIFFVFSLAAGDGEEGIVQLAFETSGSILDQHFELVPDSFMDAMNCLTEFACNPFFQDTAIEAVRLINEAASRVAGRPRLFYAKDGDGSDEEDRLWVRGWFPIVFGLSRVVSRCKLDIRTR* # ORIGINAL: g6930.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 11933 13432 . + . ID=g6930;Name=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 11933 13432 . + . ID=g6930.t1;Parent=g6930;Name=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 11933 11974 . + . ID=g6930.t1.exon1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 11933 11974 . + 0 ID=cds.g6930.t1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 12086 12260 . + . ID=g6930.t1.exon2;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 12086 12260 . + 0 ID=cds.g6930.t1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 12380 12512 . + . ID=g6930.t1.exon3;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 12380 12512 . + 2 ID=cds.g6930.t1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 12608 12742 . + . ID=g6930.t1.exon4;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 12608 12742 . + 1 ID=cds.g6930.t1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 12905 13028 . + . ID=g6930.t1.exon5;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 12905 13028 . + 1 ID=cds.g6930.t1;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 13211 13432 . + . ID=g6930.t1.exon6;Parent=g6930.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 13211 13432 . + 0 ID=cds.g6930.t1;Parent=g6930.t1 #PROT g6930.t1 g6930 MAAMDASLELKHHEVRDWLKGIYGDERIPPYEVNAATIEVMHELMRRNQDRDRESALLIEQNSKFGEEYASEASRLDGILGCLGLSHSALSQSGIVSMRALSSLALTLDLQTTSLPGYVAALSELTCSLADVRAKNEEEEVKIERTRQKMADEITRLSDLRRSVGEVASQTEKNRGVLDKRLRELPFYRGKAQEYTNLIAELKGGYSGCGYDESISHATLAARATVVAKLQADNASKSAALSSYNSLPPVRDAAVLHMHSGYCASVLGVLFSCREY* # ORIGINAL: g6926.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 1523 3787 . - . ID=g6926;Name=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 1523 3787 . - . ID=g6926.t1;Parent=g6926;Name=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 2880 3787 . - . ID=g6926.t1.exon1;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 2880 3787 . - 0 ID=cds.g6926.t1;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 2527 2654 . - . ID=g6926.t1.exon2;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 2527 2654 . - 1 ID=cds.g6926.t1;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 2237 2355 . - . ID=g6926.t1.exon3;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 2237 2355 . - 2 ID=cds.g6926.t1;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 1869 2116 . - . ID=g6926.t1.exon4;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 1869 2116 . - 0 ID=cds.g6926.t1;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 1523 1628 . - . ID=g6926.t1.exon5;Parent=g6926.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 1523 1628 . - 1 ID=cds.g6926.t1;Parent=g6926.t1 #PROT g6926.t1 g6926 MDTSGSAVISSRLNLHDRSGASPFSTVTPLRLGEGADTASTRDADLITPQNRRRPQAFPTEAPLPPPQQQQRHDDVGPLLAELDETRRHCAFLTDIVARLNSALAKYHGKTNVPPSMMVAGSVDGAETGADGQKMPPWWTDERAMCPLLTEYDQQLADKDAAIGGLETELDAMRRRVEALLVENEAAIVTMRSRMRTSDGDRDREGDESMRRHVVILEEENRILNEQTSSLQTELDGVQSALEVASRDAMRWRSRAEDAERKAARLNAAAEKNGESLRMSEDLRARENAEAQAISNALAQASNKFDEDRRIAQTTIDALRIDIADATRTLSVLDAEATGLRNELAGVRGRMGKMQRKIDASRDAAAAAFARESVAIRQSEHLSRKARQLRAQRDSALRSLRELEVSTVRLAERIESQKAVTTSSVESAIRMCAVGEGEKSRLLDALKSLEVTAKEQRGDIERLLGDKRSIEGDLDKLWRSTNMENRQMIDSLGPRAVWRIDN* # ORIGINAL: g6931.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 14245 15891 . + . ID=g6931;Name=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 14245 15891 . + . ID=g6931.t1;Parent=g6931;Name=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 14245 14402 . + . ID=g6931.t1.exon1;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 14245 14402 . + 0 ID=cds.g6931.t1;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 14583 14712 . + . ID=g6931.t1.exon2;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 14583 14712 . + 1 ID=cds.g6931.t1;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 14883 14984 . + . ID=g6931.t1.exon3;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 14883 14984 . + 0 ID=cds.g6931.t1;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 15165 15326 . + . ID=g6931.t1.exon4;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 15165 15326 . + 0 ID=cds.g6931.t1;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 15673 15891 . + . ID=g6931.t1.exon5;Parent=g6931.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 15673 15891 . + 0 ID=cds.g6931.t1;Parent=g6931.t1 #PROT g6931.t1 g6931 MTPRKTKAAAAIASETVDDGELDRLVGEAFADIKSRLGAAKQRTQAAPGAAAGGLLSALDAGIDTSALYIRYGDDQVASGTTGPAVGGLQSAIDAKVAKAMDALGNLEKSDTVQSYKTTSLELARKKKRDEVNDNAGKGWYNLPATPITPELKRDLQLLRMRNVLDRKRHYKANDMKTLPKYFQVGRIIEGAGEFFSSRIPKAHRKQTLVDELLSDAKFKKYAKKKFVDVQTANAGGRKAHYKGVKNMRKPKWAKE* # ORIGINAL: g6927.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 4348 7367 . + . ID=g6927;Name=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 4348 7367 . + . ID=g6927.t1;Parent=g6927;Name=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 4348 4464 . + . ID=g6927.t1.exon1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 4348 4464 . + 0 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 4868 4945 . + . ID=g6927.t1.exon2;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 4868 4945 . + 0 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 5182 5320 . + . ID=g6927.t1.exon3;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 5182 5320 . + 0 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 5588 5781 . + . ID=g6927.t1.exon4;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 5588 5781 . + 2 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 5936 6235 . + . ID=g6927.t1.exon5;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 5936 6235 . + 0 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 6416 6537 . + . ID=g6927.t1.exon6;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 6416 6537 . + 0 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 6820 6908 . + . ID=g6927.t1.exon7;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 6820 6908 . + 1 ID=cds.g6927.t1;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 7177 7367 . + . ID=g6927.t1.exon8;Parent=g6927.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 7177 7367 . + 2 ID=cds.g6927.t1;Parent=g6927.t1 #PROT g6927.t1 g6927 MSATNPDVEAQIRLNCPWSKLPQNVRTMLGNDVSVWELQNIVRQACRDERRYYEDMVKFSREALMLYPYHLSDVLVKGLRITPFSYYSQMLFDIMDAEKSYDALPNFTAADCLRLLGIGRNQYIDMMNQSRTKGWAWRAAKRKATLKSLLPTKPIAIAVEHWWIVHIGYVTEDDIRNCSPSEHRCIDHLIDHGARAAGELDCNVVQSLYAKGLVYLEVPIDDNDNVQVPPLEGFVMNRVLGDYFETVLYKIFVSIDEHTTLTDLAAMLNIDLQLAKNAVSVYCRLGFAKKKNVDVDFSDKKYHPSWQLRSQGIPDTRPASSSLLESRGDDSGAPIQAGESTKELLAEKPQGRRKRVAVLFDSTLTAFLMMGNLSPGLKKHAVTMFEVGKLSDESLDSFLAELNKASGAR* # ORIGINAL: g6929.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 9834 11018 . - . ID=g6929;Name=g6929.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 9834 11018 . - . ID=g6929.t1;Parent=g6929;Name=g6929.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 9834 11018 . - . ID=g6929.t1.exon1;Parent=g6929.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 9834 11018 . - 0 ID=cds.g6929.t1;Parent=g6929.t1 #PROT g6929.t1 g6929 MPTTQGKDYYKILGVPKGTADDDALKKAYRKLAMKWHPDKNPNNKEESEKRFKEISEAYEVLSDKDKREIYDKYGEEGLKGGAPPPGDHAFDGFNFAGGPAGGGGGGGAHQFHFSPSNAEDIFAQVFGDGGFASFFGGGGAGLGGRGGRQSFRMGRGGMGGMGGGMPGMGGMGGGMPGMGGMGGGMPGMGGMGGGMGSMGGMGGYGSDFEESQRAPETVKRPLPLTLEELYQGAAKKLKVTRRIQDSSTGEIVNTQKVLTIDVRPGWKVGTKITFPGEGDELAGRPAQDLVFVVEEKPHDRLKRDGDDLVTSLDISLTQALTGLTARVQGVDGRSLEVPMGDAIIKPGTQRVVANEGMPKKGGGRGNLIVNFNVQFPRSLSSMQKEQIRKILGP* # ORIGINAL: g6928.t1 original gene structure, not modified by PASA NODE_400_length_24707_cov_43.4771 AUGUSTUS gene 7603 9334 . + . ID=g6928;Name=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS mRNA 7603 9334 . + . ID=g6928.t1;Parent=g6928;Name=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 7603 7759 . + . ID=g6928.t1.exon1;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 7603 7759 . + 0 ID=cds.g6928.t1;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 7966 8129 . + . ID=g6928.t1.exon2;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 7966 8129 . + 2 ID=cds.g6928.t1;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 8280 8390 . + . ID=g6928.t1.exon3;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 8280 8390 . + 0 ID=cds.g6928.t1;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 8549 8756 . + . ID=g6928.t1.exon4;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 8549 8756 . + 0 ID=cds.g6928.t1;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS exon 8943 9334 . + . ID=g6928.t1.exon5;Parent=g6928.t1 NODE_400_length_24707_cov_43.4771 AUGUSTUS CDS 8943 9334 . + 2 ID=cds.g6928.t1;Parent=g6928.t1 #PROT g6928.t1 g6928 MAGAQVEGTSEGEAQRYFDHALTLRDTLAFLRYNATLGTPDDDEAGTAGFGLDLLRVESLSSLDTQTCTRLLQKNYQVVISIAPLAQDLRLVCGRPPPFHFGPPSPQANSFWMRLWLYATASSGPQTALFVMGTRLRALPTFLRGRDRLVMSTWGQEGVAIGGATALLSINEALVHGPVMVQVAQMASGMVVGEDDERKFVPLPLDAEDDVGADCGGLRAIAASIDLYSICGFITLARDVQSPPGTSKAAAAAAAADAPWIPFEISFGIPLFDGRTNVAVCERMRRRSMLSSAAQKDQGDASDALAQALAAFVAEHGGVPCDDGIPRPSRNLAFSGGKMVYLD* # PASA_UPDATE: g6925.t1, single gene model update, valid-1, status:[pasa:asmbl_6852,status:12], valid-1 NODE_400_length_24707_cov_43.4771 . gene 189 1288 . + . ID=g6925;Name=g6925.t1 NODE_400_length_24707_cov_43.4771 . mRNA 189 1288 . + . ID=g6925.t1;Parent=g6925;Name=g6925.t1 NODE_400_length_24707_cov_43.4771 . five_prime_UTR 189 190 . + . ID=g6925.t1.utr5p1;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . exon 189 250 . + . ID=g6925.t1.exon1;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . CDS 191 250 . + 0 ID=cds.g6925.t1;Parent=g6925.t1;5_prime_partial=true NODE_400_length_24707_cov_43.4771 . exon 521 772 . + . ID=g6925.t1.exon2;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . CDS 521 772 . + 0 ID=cds.g6925.t1;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . exon 925 1288 . + . ID=g6925.t1.exon3;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . CDS 925 1062 . + 0 ID=cds.g6925.t1;Parent=g6925.t1 NODE_400_length_24707_cov_43.4771 . three_prime_UTR 1063 1288 . + . ID=g6925.t1.utr3p1;Parent=g6925.t1 #PROT g6925.t1 g6925 EDINITYSFWDGSGHRKNITVKKGYTVQKFLEKCLEQLRHDFPELRAMSVDGIMYIKEDLIIPQHYTFYDFIVNKARGKSGPLFSFDVHEDIRLISDANVEKDESHAGKVLLRSWYERHKHIFPASRWEPYDPEKKWEKYTIHDLEKKN* # ORIGINAL: g10193.t1 original gene structure, not modified by PASA NODE_1808_length_9144_cov_53.0509 AUGUSTUS gene 1 5479 . - . ID=g10193;Name=g10193.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS mRNA 1 5479 . - . ID=g10193.t1;Parent=g10193;Name=g10193.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS exon 2072 5479 . - . ID=g10193.t1.exon1;Parent=g10193.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS CDS 2072 5479 . - 0 ID=cds.g10193.t1;Parent=g10193.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS exon 1 1847 . - . ID=g10193.t1.exon2;Parent=g10193.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS CDS 1 1847 . - 0 ID=cds.g10193.t1;Parent=g10193.t1 #PROT g10193.t1 g10193 MAPSCTRFGRHCCRPAVRCNLAASLASPGSPVSLMVILTVIIVVSTLFDTVNTAMAETVSTGDAGSESSPTIHIPPRKAPPKPFKNIGIFGGAPTTAESDPSAHRRRRTGVGRRNEEYVEPGSGDIGGAYGSRTAEETDSEGGLAKVSYAVEMHDYAFSLDLEDGIRSIACAGGSAEYLDQVDFRPSPQNADGQAAEEDAYETGRADAGTDSDEWDKDTLVVWATNLRWLSRFQERKTLIATSSAIGCDSPDQYRAYDSHTILRNRIYCGAIQGFEEEFSERTAADVCLYIVVLEGPRKAMFDFFRAGSSAIVSYTPPAQALSTHDGYGPSKAVASAEGDWQSAESDIPIFNVFAGTTHNNGTVNGASKTGTQSPGTGTPESTLSTSTETEKADSVADGENAINTKLGVDGMIDKDLPLGHDNSSSATAGVDIEDFPASDAFAGNRRRRISGYIADAFTWSFNEPGSPNYKESVGSADGAIVCENCYAVFKAGFEIRFEIGWTLTLERFYLRVAGALEVNFDATMTTTSNFKRLWELTIADVDLTMFSFTFSLGVFSVGVRSYIHLGAELEMAAALRFTANHGYYFNRQAAMSIAYTRDEGWTSQTPSNGINLDLKKTPTLSLPDAGSLSASLERTLHLVVSLVIVVYGTFSFSLTVGPYLGIALDAPSDRCPLIEYSVYAGIDWRWRVEQKEGSILSWITDDAFGFLPYPPDPTWNALFRRRDLTCGMCAGCIGTDGAQTHDNYQEGTGVTAGIDRLSAQASSSSAGPLTNVLGVLYGTFRTAVPDAGIYVSLQASWLPGTYETNRIHPSDRVWNEFLDLGTISDGALDVALREDRSFSVDPTLLSQRVSSLRTRVINEGGVLSFDVTDTTGSIRITFLAALYLTYTIETSGSFFLKSLFSPGKAPTSTRTIVMAMQVESYVTTVYAYFYLAATALSQVDLFLSPDSIPFNPLYANINTDNSVSKRVEWIRRDQDDMTSELYLGVRVRTGTIHSSVFSYFVLQMYIYSAPKFGLGGFTASIFGNPASSIDLDKGRSYLHYFLLDSNDIFSALNNPYTQTFSIECSTTDAESLGFLDMFAYINDGAPVLTTIGAAVGSGVGKSIPVADDIMRTVAYGGNQIYVQILARGSASYYLELNRREQLQVGVSGVTGTVDKILSRTVVRYSVSIPDDPNSGQLAVIFTATTVTSSRDPNSYVNAAFSFTDTSTAVATTMPSQTVAQGTRLEMALPSAESGALNIDIAFNSPFAFFFTSVALSYTISAFKTFTVIPGVPGGVGGLLGPGGVACFNVSLSKSSVPGELSLGISRPTAGSRFTLRIRPGATSCLTASTGTPAFDIKTSTAVVSAALSSSHTFAIVHVTGVLSTATLPCYLYISATETRNAPAGAVSVDIPRRGVVKVSFPFSSSTTAGDFSSGLLFKLAYTSGSSIAYVTSNLSSQHSLTPISVADKVTYIPYPSTEVGFTTNGVYTVVIDSSGGAIVSPSLVALRPGSLFVTQVGKSGSDIDCQTLANTGMRVQISLSGEQAHVLARASLEDTSSADNVRQQVAKGFAVYMNGRAVNTSAQWIDGISFARVSNESFTDIFALIPAVPTLSCNASWALGLAPPTIGTLNMSLPGDATSARVAFPSRRIANILASFNTQARVITTARTTTKVTKTVTSMATTTSAGASVVAGFQTVTLTPSAGIVMSITATKNNPAQTAALSMPSATVTAQAQAPTTTSLPVTIAVPLTVTAAPITVNAPPVTIAAPVTI # ORIGINAL: g10194.t1 original gene structure, not modified by PASA NODE_1808_length_9144_cov_53.0509 AUGUSTUS gene 6996 9144 . + . ID=g10194;Name=g10194.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS mRNA 6996 9144 . + . ID=g10194.t1;Parent=g10194;Name=g10194.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS exon 6996 7073 . + . ID=g10194.t1.exon1;Parent=g10194.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS CDS 6996 7073 . + 0 ID=cds.g10194.t1;Parent=g10194.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS exon 7298 9144 . + . ID=g10194.t1.exon2;Parent=g10194.t1 NODE_1808_length_9144_cov_53.0509 AUGUSTUS CDS 7298 9144 . + 0 ID=cds.g10194.t1;Parent=g10194.t1 #PROT g10194.t1 g10194 MRTVAYGGNQIYVQILARGSASYYLELNRREQLQVGVSGVTGTVDKILSRTVVRYSVSIPDDPNSGQLAVIFTATTVTSSRDPNSYVNAAFSFTDTSTAVATTMPSQTVAQGTRLEMALPSAESGALNIDIAFNSPFAFFFTSVALSYTISAFKTFTVIPGVPGGVGGLLGPGGVACFNVSLSKSSVPGELSLGISRPTAGSRFTLRIRPGATSCLTASTGTPAFDIKTSTAVVSAALSSSHTFAIVHVTGVLSTATLPCYLYISATETRNAPAGAVSVDIPRRGVVKVSFPFSSSTTAGDFSSGLLFKLAYTSGSSIAYVTSNLSSQHSLTPISVADKVTYIPYPSTEVGFTTNGVYTVVIDSSGGAIVSPSLVALRPGSLFVTQVGKSGSDIDCQTLANTGMRVQISLSGEQAHVLARASLEDTSSADNVRQQVAKGFAVYMNGRAVNTSAQWIDGISFARVSNESFTDIFALIPAVPTLSCNASWALGLAPPTIGTLNMSLPGDATSARVAFPSRRIANILASFNTQARVITTARTTTKVTKTVTSMATTTSAGASVVAGFQTVTLTPSAGIVMSITATKNNPAQTAALSMPSATVTAQAQAPTTTSLPVTIAVPLTVTAAPITVNAPPVTIAAPVTI # ORIGINAL: g2422.t1 original gene structure, not modified by PASA NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS gene 2 329 . + . ID=g2422;Name=g2422.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS mRNA 2 329 . + . ID=g2422.t1;Parent=g2422;Name=g2422.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS exon 2 329 . + . ID=g2422.t1.exon1;Parent=g2422.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS CDS 2 329 . + 1 ID=cds.g2422.t1;Parent=g2422.t1 #PROT g2422.t1 g2422 MTGGKGPGEHVGHKQYDHNAQTGFVLAFSKLVELDDHLELDAVYDWLGRVRVDGKADAELLRTFVRNAYKRLAENKTRFSKLQGSAPARQFMQPPSSTGASGHSSTGA* # ORIGINAL: g2423.t1 original gene structure, not modified by PASA NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS gene 822 1445 . + . ID=g2423;Name=g2423.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS mRNA 822 1445 . + . ID=g2423.t1;Parent=g2423;Name=g2423.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS exon 822 1445 . + . ID=g2423.t1.exon1;Parent=g2423.t1 NODE_3323_length_3736_cov_28.8681_potentialcontaminant AUGUSTUS CDS 822 1445 . + 0 ID=cds.g2423.t1;Parent=g2423.t1 #PROT g2423.t1 g2423 MANDETVTQTLVQNKPANEMWTKDSHEGEVDLEAEVGQACEAVEASEAIEVSETVEASEAIKVSETVEAAEAVEGGAAYFNRLIGTFPQDASISRTRVTNRVRHSFDDFDFRDEDSKDSEDSEDENFEYNVDEDDMPGFPSSLREYLLTNQRIVSGLSTPAVWFCDRLAFLIHRKKLSIIDKVNVIMDKPDGFGFSDTGMLCISHHD* # ORIGINAL: g1663.t1 original gene structure, not modified by PASA NODE_2585_length_5786_cov_40.8065 AUGUSTUS gene 2840 4972 . + . ID=g1663;Name=g1663.t1 NODE_2585_length_5786_cov_40.8065 AUGUSTUS mRNA 2840 4972 . + . ID=g1663.t1;Parent=g1663;Name=g1663.t1 NODE_2585_length_5786_cov_40.8065 AUGUSTUS exon 2840 4972 . + . ID=g1663.t1.exon1;Parent=g1663.t1 NODE_2585_length_5786_cov_40.8065 AUGUSTUS CDS 2840 4972 . + 0 ID=cds.g1663.t1;Parent=g1663.t1 #PROT g1663.t1 g1663 MWAGYACNPATAPTTQQESALDCEPQHAVMPVAAIFVVSAVTAQPIESLLSQLPTVSDVGGDEAADVRDAATESSVDVAQTAPVHEQHLNDMTGVRQPSNGGTAGCTVAVPKDEWVTWWEAQWPQECIPSPSSQEFVTNGILTGREYAYVRAQNEYVDAFRADAAPFYPESGLFPDDNMSSSLAHEDTKSCPYSKNTSEGWLSYPFESGTNYKANAGAVVEDTLINSIELTTTLQQLLRVNGSTGNLPSYHPEVSCMPHGEAYIETTVPARTHVHHETAAPAGSKWHDEPRACWSATTVYDCGACAATNVCRISAPPASRHTPLPSSECGHIVQNTHHNWDVQQLRGTSHFSAVGDCKYVWGDELLTANGGALGTDEGGTFFEPSAADADEGRASFRFPVMPADTFVERRDVQWLEPASPFTSSHSIAIAEHSDSGRPFEVAAHGDYPDGARDSQSGIQIRSLALPNQRCRTKPGLYDTAETATLQIALPSERLARPRKTATAVTAVLLANITTDNSDMNAQQCSVIGAATAWLQTRGTKTFGSRASATASLSQTDLPTDATPALMDSICPTHAKIRRDADNPVRPAARESRKRKCSAVHRVFHAKPTMRCVFGLLAPTAYAAECHGAHLRKKEGRHSRSQSAYGGISSHLTWVDSTLQAESQTPANIYRIQDQRQVTAGPQHDVPDPVDARSRHYILVQQIIQGLGAHI* # PASA_UPDATE: g1662.t1, single gene model update, valid-1, status:[pasa:asmbl_4594,status:12],[pasa:asmbl_4595,status:13], valid-1 NODE_2585_length_5786_cov_40.8065 . gene 1 1449 . + . ID=g1662;Name=g1662.t1 NODE_2585_length_5786_cov_40.8065 . mRNA 1 1449 . + . ID=g1662.t1;Parent=g1662;Name=g1662.t1 NODE_2585_length_5786_cov_40.8065 . five_prime_UTR 1 534 . + . ID=g1662.t1.utr5p1;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . exon 1 620 . + . ID=g1662.t1.exon1;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . CDS 535 620 . + 0 ID=cds.g1662.t1;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . exon 890 1043 . + . ID=g1662.t1.exon2;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . CDS 890 1043 . + 1 ID=cds.g1662.t1;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . exon 1396 1449 . + . ID=g1662.t1.exon3;Parent=g1662.t1 NODE_2585_length_5786_cov_40.8065 . CDS 1396 1449 . + 0 ID=cds.g1662.t1;Parent=g1662.t1 #PROT g1662.t1 g1662 MTDAFVDTVSRFFQHAPRCANAYVAFEKRVNFTLADMAAVSPEYDYFMSSLERHKMRFVATRIDTASIPTSTPYDRVPELELWRISPSHDRRQETYQ* # ORIGINAL: g9388.t1 original gene structure, not modified by PASA NODE_302_length_27653_cov_41.3267 AUGUSTUS gene 16775 21088 . - . ID=g9388;Name=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS mRNA 16775 21088 . - . ID=g9388.t1;Parent=g9388;Name=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 20725 21088 . - . ID=g9388.t1.exon1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 20725 21088 . - 0 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 20146 20213 . - . ID=g9388.t1.exon2;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 20146 20213 . - 2 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 19581 19637 . - . ID=g9388.t1.exon3;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 19581 19637 . - 0 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 19233 19355 . - . ID=g9388.t1.exon4;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 19233 19355 . - 0 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 18556 18898 . - . ID=g9388.t1.exon5;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 18556 18898 . - 0 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 18084 18178 . - . ID=g9388.t1.exon6;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 18084 18178 . - 2 ID=cds.g9388.t1;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 16775 17752 . - . ID=g9388.t1.exon7;Parent=g9388.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 16775 17752 . - 0 ID=cds.g9388.t1;Parent=g9388.t1 #PROT g9388.t1 g9388 MNSRGSKLVNIARTNGPTAPSHVNGAVAPGDVTIDAGDSVPMTIWPQPRKECGAGGGGTGGGSGGGNGSGNGSCFGSTVFTPEEEAAITAALRMKLGPEYISYRAAPGNQKLAYVEGWKYIELANETFGFNGWSSAVTSIATDFDVGYGTAENVKSRTAAFEKAKKEAVTDGLKRALRMFGSGLGNCVTDKSYLQRISRISGVEQEPLDETLLRRPLKQGRAPAYVNSHSPHSQPHAYVSAQRGAPQALRTHPTAGMGPPPVTVHGKQPGEASPAIASPAVRGVPPPLPTLAVTPVTEDVTSRPPATAAIKPALSNKEDLEYLIRQMDSGAGDAIPHHVVTSVAATTEDIICEDDFTASQCDALLMAEIPAPTAQVHPRAPAVAAQPPKAHLTEMSGAPPSKPYLTPAVHPPAPRDTSSPKSNPFSPKEKRQPPLTAVASVTSDAAGLNPYSSRPRAPGSAHHVTSTLTHTDVHGRGTGGSLSAGCYIPGLPGPSPPFENPSVLKASIDAAAPTTTPTTTVAPPTATTAGVPIVNPYGRPRAAPAPWESPLKSPLKGSGQPNTHGAGMGMHVTHQQQQQHVTIQRGDSNGHTANLHGSVAVAAPATAIATAAGTPVAMDHSVANGGVFQNTLDRLFPSRPPSSTPARADLAASAPDVGGGGGALYLPDAKRQRIE* # ORIGINAL: g9384.t1 original gene structure, not modified by PASA NODE_302_length_27653_cov_41.3267 AUGUSTUS gene 143 3475 . - . ID=g9384;Name=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS mRNA 143 3475 . - . ID=g9384.t1;Parent=g9384;Name=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 3289 3475 . - . ID=g9384.t1.exon1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 3289 3475 . - 0 ID=cds.g9384.t1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 2652 3005 . - . ID=g9384.t1.exon2;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 2652 3005 . - 2 ID=cds.g9384.t1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 1413 2478 . - . ID=g9384.t1.exon3;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 1413 2478 . - 2 ID=cds.g9384.t1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 1025 1170 . - . ID=g9384.t1.exon4;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 1025 1170 . - 1 ID=cds.g9384.t1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 731 793 . - . ID=g9384.t1.exon5;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 731 793 . - 2 ID=cds.g9384.t1;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 143 501 . - . ID=g9384.t1.exon6;Parent=g9384.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 143 501 . - 2 ID=cds.g9384.t1;Parent=g9384.t1 #PROT g9384.t1 g9384 MDDTRHPDDEQKAEVTAVDAHQVDVPLSVLKGTFGIDEFRPFQRDAVDAVLRGMDALVVLPTGAGKSLCFQVPALCTPVGIAVVVSPLIALMEDQVVRLRSNGIAAAHLSSTLSKQEQSAIVSDINAVTPTTRLLYVTPERMATKGFRSVLQGLHARSLLRFMAVDEAHCVSEWGHSFRHDYLELGIWKSLFPTLPCIAFTATATERVQSDIIRLLHMHDPVRVKASVARTNLTYSVLYKELVDDPIEHLCEWILGLSSENGGSAPASNRKRGPTLASFFEPVRNRTKTEDDGSASTQLGKGVGAVAGGAPAGAVPCGIVYCHTRQSCEEVAAALCKRCISAVAYHAGLANGERAEAQAKWSAGEVPVVAATVSFGMGIDKADVRFVAHWCLPASLEAYYQESGRAGRDGLPSVCRMYYSRKERDLRLFLMSKDVNGTADPGVGAGGGGGKGRPAMTAASAKAQTESFNSLIGYAEGVLCRHSAIARYFGENLAPCGTRCDACADPAGVAQQARLFAGAAVTGASRKGGRAKDFIRDATDGIALPRREAYDDDGGSDARDSYNGESRRRRRDDEDNEEISEMRRELAERTRRRSSLAEANHRIAQERARSTKNYSGPIIDAADDHIASLQLSVREHCYGLLRDAVIANRDAQHQQQQRQSAENDACSGSDVAVQSATTPEDVAAAVEHDCFVASKIDSLYKSACMRALREVRDATKGGRVYRRT* # PASA_UPDATE: g9390.t1, single gene model update, valid-1, status:[pasa:asmbl_5449,status:12], valid-1 NODE_302_length_27653_cov_41.3267 . gene 26721 27583 . + . ID=g9390;Name=g9390.t1 NODE_302_length_27653_cov_41.3267 . mRNA 26721 27583 . + . ID=g9390.t1;Parent=g9390;Name=g9390.t1 NODE_302_length_27653_cov_41.3267 . five_prime_UTR 26721 26767 . + . ID=g9390.t1.utr5p1;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . exon 26721 26855 . + . ID=g9390.t1.exon1;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . CDS 26768 26855 . + 0 ID=cds.g9390.t1;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . exon 27158 27300 . + . ID=g9390.t1.exon2;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . CDS 27158 27300 . + 2 ID=cds.g9390.t1;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . exon 27569 27583 . + . ID=g9390.t1.exon3;Parent=g9390.t1 NODE_302_length_27653_cov_41.3267 . CDS 27569 27583 . + 0 ID=cds.g9390.t1;Parent=g9390.t1 #PROT g9390.t1 g9390 MASRFVLVAVVALAVASSAVAFKTCRPHKNVFVGGERITEPLPSSYLKPEDIPASYSWTDVNGVNYVTKTRNQHIPQYCGR* # ORIGINAL: g9385.t1 original gene structure, not modified by PASA NODE_302_length_27653_cov_41.3267 AUGUSTUS gene 4766 6376 . - . ID=g9385;Name=g9385.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS mRNA 4766 6376 . - . ID=g9385.t1;Parent=g9385;Name=g9385.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 4766 6376 . - . ID=g9385.t1.exon1;Parent=g9385.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 4766 6376 . - 0 ID=cds.g9385.t1;Parent=g9385.t1 #PROT g9385.t1 g9385 MAILMGAALMLTVVCLGVFQRHLVLSFWKCAPEDELCVEQEYVPGNLRNTTALRSAIDVPLFHPGDGDDHATHGHEGHSHALPGHRESSAGVDATSVKADAGHAAIDGGEGSVANRPAEHDHKDATRPDHIAPTVDEVKMACSHLAPRHEMKLPMQFDRRNPMFRASIENALNDKRETDNFVATLKNKLSMLKGRGASKGDVDAFEKRVNKEYRSNRTNHLCVLVPFRDRHEQLHTFVPHMTRFLNAANISHEIWAINQVDSFRFNRAQLLNAGIALGGGRCNYFAMHDVDLLPLNPALDYSYPVRAVRHVSGPQYHPKYHYPAFVGGILVLNAGQFLRINGLSNNFWGWGKEDDELFARLRDADLEIERPTGLNTDSNNTFQHLHDDERVARDKSRDARQKWFSRQRDMQSGLRTLTFTLTGLRIGYVIDEVSLGHSHSKDSNNDLSRANNSTAVDNNGSNASGIRRDDPPGNNSDAAAPPSAPPSSVSSSSTTVPSRPDTSRAATAVRQGGCYQIADVILECNKRVTPWCEPAS* # PASA_UPDATE: g9386.t1, single gene model update, valid-1, status:[pasa:asmbl_5451,status:12], valid-1 NODE_302_length_27653_cov_41.3267 . gene 7976 13203 . - . ID=g9386;Name=g9386.t1 NODE_302_length_27653_cov_41.3267 . mRNA 7976 13203 . - . ID=g9386.t1;Parent=g9386;Name=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 13121 13203 . - . ID=g9386.t1.exon1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 13121 13203 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 12932 12992 . - . ID=g9386.t1.exon2;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 12932 12992 . - 1 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 12696 12775 . - . ID=g9386.t1.exon3;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 12696 12775 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 12370 12474 . - . ID=g9386.t1.exon4;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 12370 12474 . - 1 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 11839 12085 . - . ID=g9386.t1.exon5;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 11839 12085 . - 1 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 11394 11576 . - . ID=g9386.t1.exon6;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 11394 11576 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 10780 11181 . - . ID=g9386.t1.exon7;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 10780 11181 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 10462 10551 . - . ID=g9386.t1.exon8;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 10462 10551 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 9982 10133 . - . ID=g9386.t1.exon9;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 9982 10133 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 9541 9650 . - . ID=g9386.t1.exon10;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 9541 9650 . - 1 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 9169 9275 . - . ID=g9386.t1.exon11;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 9169 9275 . - 2 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . exon 7976 8981 . - . ID=g9386.t1.exon12;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . CDS 8205 8981 . - 0 ID=cds.g9386.t1;Parent=g9386.t1 NODE_302_length_27653_cov_41.3267 . three_prime_UTR 7976 8204 . - . ID=g9386.t1.utr3p1;Parent=g9386.t1 #PROT g9386.t1 g9386 MDSSNPQTDVLCESVASVRIKHGDREERRAEITIQVAIRTVSTPVHKRVMVVRLTEEDDPFFLYTLEIGEDDYGSLKTELSLVVDFADFPAKFIDLLQTCIRDATSDSPRFVLQLATGEPHNPATHHHYGMPGTAGMSSSAQQSTSLAASVAQLRVVEINNFRHMTVLSLRFMHGTDASLKKFLATCLKEHKTRSAMLASRLAIVEADLKSTVARAEQRIGERSQECESLKFDLATKLAEVSQRHTSELAGERERHSAALTEVQQRLDRERRESDDRKDSLLRATEQRLLAAESLVRELTSGKATADASLADKTSRLVHAEEELAAERERSRHLAGENKRLEAARYDMEKEAGRTGVRIAALQQEVKDKDEAIKRMVESTDTANEQKRRFDEAIVAYKSQITRLEDSVASQAKDITKANEIIQRLQSDIAAAKAKLKMRGEVTIRQERLLEERQAALEKHARDEEQLKVELSHVRADCVRLESEVAAMASRVEEARKVIESNQNLIDFLNRQLNDVALDGMGAANNAAHMSTHPPRPWAQQRQTAAPSTQRSTVNASASSAQYPLPSRATQQPTHLPRPVVYRPSHAGMASSPNDVPVPAARKREMGAEREMSASPRDAALPSSQQRRTHQHDLSADADSLPRQAPVRAAAHQSPTTGTVGAAADRDRNGTSGGGSASASQSKDRASLPGSILGDIPPPVYARRALGEMGQGHPSRAYDAVANVLAGLAPKQPAQVQMQMHAAKAAASALAPAQHAGDGGQKAPSRVSAADDRSFSAYFRKTDDAEGLTADGYSDFDS* # ORIGINAL: g9389.t1 original gene structure, not modified by PASA NODE_302_length_27653_cov_41.3267 AUGUSTUS gene 22263 25878 . + . ID=g9389;Name=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS mRNA 22263 25878 . + . ID=g9389.t1;Parent=g9389;Name=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 22263 23450 . + . ID=g9389.t1.exon1;Parent=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 22263 23450 . + 0 ID=cds.g9389.t1;Parent=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 23611 24939 . + . ID=g9389.t1.exon2;Parent=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 23611 24939 . + 0 ID=cds.g9389.t1;Parent=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS exon 25084 25878 . + . ID=g9389.t1.exon3;Parent=g9389.t1 NODE_302_length_27653_cov_41.3267 AUGUSTUS CDS 25084 25878 . + 0 ID=cds.g9389.t1;Parent=g9389.t1 #PROT g9389.t1 g9389 MQRSQRGLPPQAFISTATDRHVTASATPTAPEQDLQIVSHYRTLQKCLGAPGDGIASLRSTDEFVVQFTGPISHGKTTTAAQIARRGMRRYSCDRDEITITPGGGDDRWLSLQLKAALDNRDAPRDYLTAIQAQMRRSPDLPIGPGYSNPSGVGGSTAGVDIYSGSDGAHLYTEYVVPGEDFLKASCDKFKIALAANEDAVHETVEKGAEFARDILRAVIGEKHERRLTAQDVDAVFQHEHVAGLLGRTFSYSPKCKNYDEGCLNIVKFTERIRSNPIWTVMITCTRHNLPTSSLITSDGTHFRIQDNEGLHAGNTEVQLHKDDLANTPVVFVFASPTHLTTDTTRTLDAAGFFADVLQRGAAGRLTPHFGIICALDASNRVCTAASVQDIRSTIKRSTERFLREYMAEEGISPVETHADLIAARERYSVCLHSKHIETDTLAELIGIIANAVMERRRENVAANIDDINSILRRWGTLSRVTSIAGSELSAAVNSLTPAATTIAAEVCSEMRACISAVFKEVLAGDSRASFAWRLALTSIDVTMKTTSRQTLTSMLRLVAKGKDAGCSPAEATAIRHSLLRCMIEPMEKAIRTIAGNEIPAAAGRAVRRECERLQGDAMAHRDVQALTNSIEEEVEAMVKSRTADDLACALACAALKPMGECLHSINNDNSLPSSRVTEGRVDKMLDSRRLECQENVASAFLSVFEEHFFAGIRTTILNVITAWRQQGASGGLPAHSALKKYAADHEQCCPNSTTNSTAGAAVRNIAEAADLSDADKKAQLSAMLVPHLRDHLRSIGKPSWRLRKAQLIESIIFAAKTATAPATERSRGDKRKLTEVHNDVAGPSENVAVRGNTTITDGHVVGAPSKRLRVHEDSDNGVKGPSVEVARAKGKAPAEVNGDATLDSGRRQGVVVPGIRMDPAPAAPAALTSRAPASRERTPHRPVPVKSDPTEGHHPIKPEREPVERTHTAATAAAINDNASAIVSAATSIATKRAPRKTSPLSRERLHEVIQRLRHKKRLTTDANSQQTLDALSQLTIDQIRAEASKARAKESDISALLKVVYMRTRHAPSAQSAPSAQSARAPLPVRDAHGRFRPTDPLAHS* # PASA_UPDATE: g9387.t1, single gene model update, valid-1, status:[pasa:asmbl_5448,status:3], valid-1 NODE_302_length_27653_cov_41.3267 . gene 13664 16490 . + . ID=g9387;Name=g9387.t1 NODE_302_length_27653_cov_41.3267 . mRNA 13664 16490 . + . ID=g9387.t1;Parent=g9387;Name=g9387.t1 NODE_302_length_27653_cov_41.3267 . five_prime_UTR 13664 13814 . + . ID=g9387.t1.utr5p1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 13664 14124 . + . ID=g9387.t1.exon1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 13815 14124 . + 0 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 14294 14382 . + . ID=g9387.t1.exon2;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 14294 14382 . + 2 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 14648 14758 . + . ID=g9387.t1.exon3;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 14648 14758 . + 0 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 14954 15389 . + . ID=g9387.t1.exon4;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 14954 15389 . + 0 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 15686 15846 . + . ID=g9387.t1.exon5;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 15686 15846 . + 2 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . exon 16095 16490 . + . ID=g9387.t1.exon6;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . CDS 16095 16241 . + 0 ID=cds.g9387.t1;Parent=g9387.t1 NODE_302_length_27653_cov_41.3267 . three_prime_UTR 16242 16490 . + . ID=g9387.t1.utr3p1;Parent=g9387.t1 #PROT g9387.t1 g9387 MFRRKPSNNAEAAPSPSSLSASPNGPPSSLSASSSGQSLAVPPTWELGGSFGGGRPKSMDLDDSSLRTLKGHDLVVFHASAPIYCDHCTEYIWGLFKTCYRCTKCRYTCHKRCAATITLECLPVVKPTKTSFKRMMAQGEKFDMSRLSKKELKKIAETYTKNTGQQLEVMKDGDEAIARGIVRISMDLSRPVNVASQTRRPSIVSGKLDGPDLASLGSSGASGAALGAGATAYVRAVTPAGTIGRAPTGTIGRTPPRLLDIKNKSSFYIAPATLHSIALNSNLTSLETIAVLLAKFSIKDNPRKFALYVVTNDSKATVRRVSDSERPLEVVIGWGCSKHTGEHLSLQEEDEEDAAHDGGGGGGAETADEWSRYTEDELETFLSLLTTEEEEAVERLQNKYASTKTYVCSLISDATSS* # PASA_UPDATE: g11039.t1, single gene model update, valid-1, status:[pasa:asmbl_7665,status:12], valid-1 NODE_4845_length_1204_cov_34.5819 . gene 110 945 . + . ID=g11039;Name=g11039.t1 NODE_4845_length_1204_cov_34.5819 . mRNA 110 945 . + . ID=g11039.t1;Parent=g11039;Name=g11039.t1 NODE_4845_length_1204_cov_34.5819 . five_prime_UTR 110 111 . + . ID=g11039.t1.utr5p1;Parent=g11039.t1 NODE_4845_length_1204_cov_34.5819 . exon 110 242 . + . ID=g11039.t1.exon1;Parent=g11039.t1 NODE_4845_length_1204_cov_34.5819 . CDS 112 242 . + 0 ID=cds.g11039.t1;Parent=g11039.t1;5_prime_partial=true NODE_4845_length_1204_cov_34.5819 . exon 455 524 . + . ID=g11039.t1.exon2;Parent=g11039.t1 NODE_4845_length_1204_cov_34.5819 . CDS 455 524 . + 1 ID=cds.g11039.t1;Parent=g11039.t1 NODE_4845_length_1204_cov_34.5819 . exon 808 945 . + . ID=g11039.t1.exon3;Parent=g11039.t1 NODE_4845_length_1204_cov_34.5819 . CDS 808 945 . + 0 ID=cds.g11039.t1;Parent=g11039.t1 #PROT g11039.t1 g11039 AHYGPSVVRFNFHLFPLPYHHNSFYAAQGAKTAAQQDSALFFKWLEAVFAVQDSLGNAATANLTSTEVIAKFGDVGQSIGIAKQTIINGIANANTDGAIRTSWKYACTREWP* # ORIGINAL: g2842.t1 original gene structure, not modified by PASA NODE_6845_length_503_cov_289.848_potentialcontaminant AUGUSTUS gene 2 503 . + . ID=g2842;Name=g2842.t1 NODE_6845_length_503_cov_289.848_potentialcontaminant AUGUSTUS mRNA 2 503 . + . ID=g2842.t1;Parent=g2842;Name=g2842.t1 NODE_6845_length_503_cov_289.848_potentialcontaminant AUGUSTUS exon 2 503 . + . ID=g2842.t1.exon1;Parent=g2842.t1 NODE_6845_length_503_cov_289.848_potentialcontaminant AUGUSTUS CDS 2 503 . + 2 ID=cds.g2842.t1;Parent=g2842.t1 #PROT g2842.t1 g2842 SFIVVRNFRHDLLFGIDFLEQHGARIDLKRHVVLLDKNSPPLHLHTRMASQFATNAALFTTNTLTLKGRHETLVPVAPKTLNKHTPWSHEKTYPIVAFSHPHVAATLGLHIATGPADVRDGTTHIVVLNPSPKDVVLRADTPVGRFYRPPTDIVTTICEEPAAPVS # ORIGINAL: g3070.t1 original gene structure, not modified by PASA NODE_17820_length_211_cov_224.787_potentialcontaminant AUGUSTUS gene 1 129 . - . ID=g3070;Name=g3070.t1 NODE_17820_length_211_cov_224.787_potentialcontaminant AUGUSTUS mRNA 1 129 . - . ID=g3070.t1;Parent=g3070;Name=g3070.t1 NODE_17820_length_211_cov_224.787_potentialcontaminant AUGUSTUS exon 1 129 . - . ID=g3070.t1.exon1;Parent=g3070.t1 NODE_17820_length_211_cov_224.787_potentialcontaminant AUGUSTUS CDS 1 129 . - 0 ID=cds.g3070.t1;Parent=g3070.t1 #PROT g3070.t1 g3070 MLNTGVAGLPNFGLFGVTDTEVEFGGAVARASNATDASPPSGF # PASA_UPDATE: g7982.t1, single gene model update, valid-1, status:[pasa:asmbl_3999,status:3], valid-1 NODE_2305_length_6780_cov_39.8427 . gene 1277 3908 . + . ID=g7982;Name=g7982.t1 NODE_2305_length_6780_cov_39.8427 . mRNA 1277 3908 . + . ID=g7982.t1;Parent=g7982;Name=g7982.t1 NODE_2305_length_6780_cov_39.8427 . five_prime_UTR 1277 1545 . + . ID=g7982.t1.utr5p1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . exon 1277 1876 . + . ID=g7982.t1.exon1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . CDS 1546 1876 . + 0 ID=cds.g7982.t1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . exon 2104 2429 . + . ID=g7982.t1.exon2;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . CDS 2104 2429 . + 2 ID=cds.g7982.t1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . exon 2752 2913 . + . ID=g7982.t1.exon3;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . CDS 2752 2913 . + 0 ID=cds.g7982.t1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . exon 3154 3325 . + . ID=g7982.t1.exon4;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . CDS 3154 3325 . + 0 ID=cds.g7982.t1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . exon 3484 3908 . + . ID=g7982.t1.exon5;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . CDS 3484 3869 . + 2 ID=cds.g7982.t1;Parent=g7982.t1 NODE_2305_length_6780_cov_39.8427 . three_prime_UTR 3870 3908 . + . ID=g7982.t1.utr3p1;Parent=g7982.t1 #PROT g7982.t1 g7982 MGAILISLLLPILSTLLGYSLGVRQTYIWIVNCFLKYSARLQSDRNPDAPQARAPVPTTPANGSTPLRRRISALNITASPPRDAANTSAAGIGSSSAVFTRPALPRNVSFRTLRQEFHLSDACSFLTDGVAAIVDDEVTRCFSSEELPAWNMLFRTGANLDIGDIPKRVFPAYVLGFMLRYFFFFPIRLMSGLTGVAFFIWSFSIIAMMKPSRLRKFLEVRCSYLTARMFVLSWSAVIKYHDVQNRARGGICVANHTSPIDCIVLANDNCYSMVGQKHGGFIGLLQKTLSIAQTHVWFERSEARDRSIVAKRLKDHVSNPDNNPVLIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYHPKFGNCFWDSAHQSFLGHVFSLMTSWAVVCDVWYLPPMEQEEGESPVDFANRVKAAIARKGGLVDVQWDGMLKRQRVRPDFVEEVQREYSSQLLSVG* # PASA_UPDATE: g7983.t1, single gene model update, valid-1, status:[pasa:asmbl_3998,status:3], valid-1 NODE_2305_length_6780_cov_39.8427 . gene 4339 6769 . - . ID=g7983;Name=g7983.t1 NODE_2305_length_6780_cov_39.8427 . mRNA 4339 6769 . - . ID=g7983.t1;Parent=g7983;Name=g7983.t1 NODE_2305_length_6780_cov_39.8427 . five_prime_UTR 6617 6769 . - . ID=g7983.t1.utr5p1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 6576 6769 . - . ID=g7983.t1.exon1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 6576 6616 . - 0 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 6324 6484 . - . ID=g7983.t1.exon2;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 6324 6484 . - 1 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 5515 5781 . - . ID=g7983.t1.exon3;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 5515 5781 . - 2 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 5136 5201 . - . ID=g7983.t1.exon4;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 5136 5201 . - 2 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 4779 4909 . - . ID=g7983.t1.exon5;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 4779 4909 . - 2 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . exon 4339 4529 . - . ID=g7983.t1.exon6;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . CDS 4344 4529 . - 0 ID=cds.g7983.t1;Parent=g7983.t1 NODE_2305_length_6780_cov_39.8427 . three_prime_UTR 4339 4343 . - . ID=g7983.t1.utr3p1;Parent=g7983.t1 #PROT g7983.t1 g7983 MLMEDDPTFDAGRGSFLTQSGEVEMDAIIATDGYRMGAVCAVQNVRNPISLARLVMEKTKHVMLTGKGARAFADEHGVPFAPTDSLLVGRELERYHAIQQERVTYESKDAFRGHTKATDVHVTGPAAPRVKGQGMGTVGCVCVDDHGGVAIAVSTGGTPFKRAGRIGDTPLWGAGGYLEAGMGVAATGYGEDLIRVMATRTVSDHRKYLGLNPQQAVEATIRHLQSEVGGLGGLIALSSNGQVGIAFNTPRMAFACQIGDHSAPIVGIEPADLHQLPSSSAHA* # ORIGINAL: g8110.t1 original gene structure, not modified by PASA NODE_4625_length_1397_cov_35.4213 AUGUSTUS gene 204 1194 . - . ID=g8110;Name=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS mRNA 204 1194 . - . ID=g8110.t1;Parent=g8110;Name=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS exon 1132 1194 . - . ID=g8110.t1.exon1;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS CDS 1132 1194 . - 0 ID=cds.g8110.t1;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS exon 865 915 . - . ID=g8110.t1.exon2;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS CDS 865 915 . - 0 ID=cds.g8110.t1;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS exon 539 660 . - . ID=g8110.t1.exon3;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS CDS 539 660 . - 0 ID=cds.g8110.t1;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS exon 204 346 . - . ID=g8110.t1.exon4;Parent=g8110.t1 NODE_4625_length_1397_cov_35.4213 AUGUSTUS CDS 204 346 . - 1 ID=cds.g8110.t1;Parent=g8110.t1 #PROT g8110.t1 g8110 MGSTREWFAQGDDTKTPRSSVPQSPALHPLGSSSNEEVASAPAIVTKLRRIQHVLLKEVDHDLYLHLLKMEIEPQIYGLRWLRLLFGREFHLDDVLVLWDAIFADGSHFEIVDYICVSMLTYIRQQ # ORIGINAL: g7501.t1 original gene structure, not modified by PASA NODE_4290_length_1863_cov_39.9256 AUGUSTUS gene 1 1863 . - . ID=g7501;Name=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS mRNA 1 1863 . - . ID=g7501.t1;Parent=g7501;Name=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS exon 865 1863 . - . ID=g7501.t1.exon1;Parent=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS CDS 865 1863 . - 1 ID=cds.g7501.t1;Parent=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS exon 279 565 . - . ID=g7501.t1.exon2;Parent=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS CDS 279 565 . - 1 ID=cds.g7501.t1;Parent=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS exon 1 125 . - . ID=g7501.t1.exon3;Parent=g7501.t1 NODE_4290_length_1863_cov_39.9256 AUGUSTUS CDS 1 125 . - 2 ID=cds.g7501.t1;Parent=g7501.t1 #PROT g7501.t1 g7501 AENSVSFIQLKDNTETWRAQANEHALPIDGDHNDEAVPPYLAFSPSGNVTSTCLVYVNYCTKADFAVFVEQMTLMHTNSTLDGCVALCRYGSNFRGNKVSVAEQHNISAVLIFSDPAEVAHDGDALYPDGASMGPDGVQRGSLYMAWGDPQTPFYPARPGVYRTPIDSPDVAAVLPRISAQPISYLNAAMLFTQMGGPAVPSSWVGGLRGVTYRLGGQLTGDVAIRVVVASNFTVAPIANVCGSIRGSVEPDRVVIMGNHRDAWVYGGADPSSGTAAMMEAVRVFGELKKGGWQPRRTLTVCSWDAEEFGLIGSSEYCEDYAHVLSTDAVAYLNVDIAVQGTLSLDVKAAPILRDVILDAARTVPIAGDASAYSVWAAAFPDSTSPQEPDMPILGSGSDFTGFYQHLGIPSADIRHVRTLTPYALYHSVHDGFAWLDKLDPGFAAHTTVVRVWGATALRLLDARALPLNA # ORIGINAL: g277.t1 original gene structure, not modified by PASA NODE_3282_length_3838_cov_39.751 AUGUSTUS gene 84 3803 . - . ID=g277;Name=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS mRNA 84 3803 . - . ID=g277.t1;Parent=g277;Name=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 3796 3803 . - . ID=g277.t1.exon1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 3796 3803 . - 0 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 3456 3572 . - . ID=g277.t1.exon2;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 3456 3572 . - 1 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 3193 3311 . - . ID=g277.t1.exon3;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 3193 3311 . - 1 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 2895 3019 . - . ID=g277.t1.exon4;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 2895 3019 . - 2 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 2174 2470 . - . ID=g277.t1.exon5;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 2174 2470 . - 0 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 1826 1968 . - . ID=g277.t1.exon6;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 1826 1968 . - 0 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 1386 1530 . - . ID=g277.t1.exon7;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 1386 1530 . - 1 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 1079 1209 . - . ID=g277.t1.exon8;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 1079 1209 . - 0 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 699 933 . - . ID=g277.t1.exon9;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 699 933 . - 1 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 342 445 . - . ID=g277.t1.exon10;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 342 445 . - 0 ID=cds.g277.t1;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS exon 84 170 . - . ID=g277.t1.exon11;Parent=g277.t1 NODE_3282_length_3838_cov_39.751 AUGUSTUS CDS 84 170 . - 1 ID=cds.g277.t1;Parent=g277.t1 #PROT g277.t1 g277 MTKYTLLVVKNFHAVRIDNCHGTPVHVAQDFLDAARKVRPNLYVVAELFTASPEIDNVYVNRLALNSLIREAMQAHRPRDLGHLVHRYGGTPVGSLLSGLSGARLVVPTIPHALFMDETHDNETPASKRSSRDFLPNAALVSMACCAIGSNRGYDELVPHNIHVVEEDRTYAPWAATTTSAATATATSTPPSHALSAASGIVLARRALNKLHIDMVVGGFSQVYVDLVTDDVIAVTRHSPSSHESVICVAYTAFSHGVDQSARRHTPSIRIPGLVVGVVMEASLEIVDCAQPFTKMTSYINGLEGLKLDIASDESVMQDGAHTATASGRYFWLEDLMDSQEGFYQLLHLKDEFAPGSVVIVRTRLSKTAEDAAYGLQSEFDLIPRATTERRMSMESRRSARAALESVTSHLLSMPEELELIIRDLTLVDLNMVLYRTDGEEKDDGLGGGAYVIPSRGATVYCGLAGIGPLLAEVRASRDLGHPLCDNLRRGDWLMEYTVQRLT # ORIGINAL: g7369.t1 original gene structure, not modified by PASA NODE_1548_length_10530_cov_47.6204 AUGUSTUS gene 811 4068 . + . ID=g7369;Name=g7369.t1 NODE_1548_length_10530_cov_47.6204 AUGUSTUS mRNA 811 4068 . + . ID=g7369.t1;Parent=g7369;Name=g7369.t1 NODE_1548_length_10530_cov_47.6204 AUGUSTUS exon 811 1251 . + . ID=g7369.t1.exon1;Parent=g7369.t1 NODE_1548_length_10530_cov_47.6204 AUGUSTUS CDS 811 1251 . + 0 ID=cds.g7369.t1;Parent=g7369.t1 NODE_1548_length_10530_cov_47.6204 AUGUSTUS exon 1378 4068 . + . ID=g7369.t1.exon2;Parent=g7369.t1 NODE_1548_length_10530_cov_47.6204 AUGUSTUS CDS 1378 4068 . + 0 ID=cds.g7369.t1;Parent=g7369.t1 #PROT g7369.t1 g7369 MDSADAQKTLLALASAVSKHTEAFANKRLPTLQAKAAKEPAQHDLHKHSTARHDTAVSRNRSEKGHVERDPKKYATQTRSAESTEKYHQHKENAVRDGRASVTAKQIRADGARSAKGHVSVPLKNSQKADVTRDDLLLNFDGAAWHQVPLDVIDAAANFKHDDQDIVRRRFAEAEVIMHRECEKYEAIAKGGSSRSDSQWLSTVMQSGTMTDKLAACTVRLQESPAHRLTVLNTLMSMARKKNRREALLAMDTLREIFIETLLPDRRLKAFAERPVAHSAVTPRHLALWYVEEMIRRAYAEFVGIVEAVAKDPLADPRNKAIKTLHQLISKKPEQEKRLLEILVNKLGDQDAKLASKVGHHLSLLLQEHPNMKGIVATEVEHLMMRPHIAPRAQYYGVCFLNQIILTSKDVTLAGKLVAFYLALFKSIISRGDLDAKMLGALLTGVNRAFPFASPSDETMEAHANTLFRVVHVSPFGTSVQALTLLFQFMSSRQTLSDRFYRALYSKMLDPEVRTSSKQAMFLNVVYRAMKADSSQKRAMAFARRLVQAAVTCPPQFVCAALVLLSEVMVERPGLRALLLQPEDDDEEEAFVDAPEDDDANNDGMPGAHDGALDAHMADAEDADVNGGSRTSAEPTLAHSKDAYDALKREPLYAHADRSCMWELSELRHHFHPTVCVFASTLLEGKRIIMNGDPLNDQTLIRFLDRFVYKNPKKQQEKDRGGSLMQPKSRGAAGSALQVTALLNSDHFASLAEADVAPDDLFFHKYFSSKAVAQRKAEAKREKKKKDKLDDGDGGDAGSDIGDDEFFDAISGGPSGGDSDDEDDDAGDDEVDAGDGEGDLDGDEGDLDGDVDDSESSDGDGGGFNYDDMEELSEDELDGMDGARGATGAADSATGAADGMDFAEQLATMESPDSSDNSDEEDVGKAKALQKGKSKKASYAARTGSVFASADDFAHMLESSGDTGGAAAKQLNWEGKRGGGDGGDYGRRGGHGGRGGRGRRGGRGGRGGRGGSGTGGGGGGGASRGNKRRMSGQSGPAAKRTKR* # PASA_UPDATE: g7370.t1, single gene model update, valid-1, status:[pasa:asmbl_1929,status:3], valid-1 NODE_1548_length_10530_cov_47.6204 . gene 4562 10375 . + . ID=g7370;Name=g7370.t1 NODE_1548_length_10530_cov_47.6204 . mRNA 4562 10375 . + . ID=g7370.t1;Parent=g7370;Name=g7370.t1 NODE_1548_length_10530_cov_47.6204 . five_prime_UTR 4562 4678 . + . ID=g7370.t1.utr5p1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 4562 4921 . + . ID=g7370.t1.exon1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 4679 4921 . + 0 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 5169 6619 . + . ID=g7370.t1.exon2;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 5169 6619 . + 0 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 6930 7224 . + . ID=g7370.t1.exon3;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 6930 7224 . + 1 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 7397 7552 . + . ID=g7370.t1.exon4;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 7397 7552 . + 0 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 7833 8498 . + . ID=g7370.t1.exon5;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 7833 8498 . + 0 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . exon 8919 10375 . + . ID=g7370.t1.exon6;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . CDS 8919 10343 . + 0 ID=cds.g7370.t1;Parent=g7370.t1 NODE_1548_length_10530_cov_47.6204 . three_prime_UTR 10344 10375 . + . ID=g7370.t1.utr3p1;Parent=g7370.t1 #PROT g7370.t1 g7370 MFRAHAARLGAAASLPMTAGAGVAIVRHSWGAALASKVAASRVDEKSIRDNRLATQPLMSASEEMENELLRKRTVIELKRKHREVKFAVRKLASGGTLRQIALNALETGSFVRVADSSDTKTIPPHVLSQDASIGRTEPLSHVPAPVSSGDAQTDQFRRFLERADVDVLTIPMGLRAQLDKLPSTSGHPTHYRNIARDLSAGASHTVQAPLHRDHVGSGPRPRQGDQRTQPAAPEESVWRQTGPSHAEAQDTWATQIAVDPGSGARSSVSASASSPVAVDLIGTVESAAADAPVSRPVVALKVAVTSDGRPHGTGHPPSNVRNASMKPPRDAVPQAPKPATATPVESFPSEPSSGRHAPLRRELAAPPTLNQPALVSAGRPAALESAPPSNVASSVPSASVTTASSSTAPPSPMAGNVVPLLENFSDERSAASSYPLLAPQPSSSPPPVDVQHSQWLDESEPYSERKRNARMAIPPLPPLLQTPELPSSADARDARTPQSGVVMTDKVRLELAEMARLASTGSTYAAPSNRRPINALRHEGTVERSDNHVHETYIPSQGLGRIKEYPRLLRALRRVFSQPAVNPRHITLAIKNCWSVQIPYKRKLSLALRVKIACSRRGIPLNNIHYNALVRLFLYEDAARKELLDEMHAAGYQRDVFTYAAQMHLLVSRGDINAAWSVIDEMRAAGVEPDQKMFRILMRIRGRNQSQHVLACVENLRAMGVSLSVASYSLALQVCYEQRNLSIAEIVWGRMMEDGVEPNVITYTTLVALQGLCGSVERAQEIVTEMETAGSVKPNVITYTILMKAYVNHDDAARVRWLLDHMQAVGCPPNEFTYQEALRLYMRSGNVGAITDTVAEMRRQGVAVTAHVYTTLLSIYASQGNVEASLGVIAEMAHRGVKPDTLVYTKLIRLYEAARRPDGILTTLSAMHDGGLIADERLYGRAMRVLAAEGMFAAMTSVAAAAVERGVQITKESWVESIDLMTTNGHMETAKEAIAYVATLYNPADMGHFMFLDLIYFAEKAKDFDLTLRLYKSAVGAGLHLGNLLVKIARRHPNNVDWLSPERTDGANLPPDVTLFNARIAAHVAACDVRSAMATYLQMIQANIHPNASTEPILVSAMMLDPQVDWTRVLLDKSCPARAERSTYNSLLSFYVQLRRPHRGVPVLQQLLDSGIGLNGHTVVAAGHILQQISHALGTLHAQGRVREALELYEKHYDKGARERRAMSLREDILGSRSVNWTAMHEQASLSPLAYEITVDGRLVERSEGLRRDWPGSSERLPIEQRARTPNNMIAFMPPPSRFLVLDALGGAVGQSRRADVDWNAQRDVWAKIDRKTQEEMRLRTERALQRAVKLRHERSVTEMLRAERHAKEASMQSKADTHTRPAGSGAGAQQPGQPSGAKHRGGARDTQRR* # PASA_UPDATE: g8919.t1, single gene model update, valid-1, status:[pasa:asmbl_2434,status:12],[pasa:asmbl_2437,status:12], valid-1 NODE_1718_length_9527_cov_42.0575 . gene 99 2024 . - . ID=g8919;Name=g8919.t1 NODE_1718_length_9527_cov_42.0575 . mRNA 99 2024 . - . ID=g8919.t1;Parent=g8919;Name=g8919.t1 NODE_1718_length_9527_cov_42.0575 . five_prime_UTR 1963 2024 . - . ID=g8919.t1.utr5p1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 1429 2024 . - . ID=g8919.t1.exon1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 1429 1962 . - 0 ID=cds.g8919.t1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 1191 1305 . - . ID=g8919.t1.exon2;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 1191 1305 . - 0 ID=cds.g8919.t1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 824 955 . - . ID=g8919.t1.exon3;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 824 955 . - 2 ID=cds.g8919.t1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 592 681 . - . ID=g8919.t1.exon4;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 592 681 . - 2 ID=cds.g8919.t1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 308 462 . - . ID=g8919.t1.exon5;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 308 462 . - 2 ID=cds.g8919.t1;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . exon 99 194 . - . ID=g8919.t1.exon6;Parent=g8919.t1 NODE_1718_length_9527_cov_42.0575 . CDS 99 194 . - 0 ID=cds.g8919.t1;Parent=g8919.t1;3_prime_partial=true #PROT g8919.t1 g8919 MPPGRSAVVGPVSTKGIKRRLPQLPPHPAKRVRKDADEDARIRASDNSSDDDDVSGDTEESDGAHDIADEDEVDDEEEVDDEEEVDDEEEVDDEEEVDDEEEVDGEVDAGDDDQLDEEGSDDSEMAGAVDASEATTASAGDGSDAVGADGTRRVRGSKKKKSLKTLTPEELEEFKKEQARKGVVYLSRVPPFMKPDKIRHLLAQYGEIGRVYLQAEDPVIRKKRMKFGGNKKRSFTEGWVEFLDKRIAKQVAASMNNTMMGGKKRNYYHDDLWNLKYLPKFKWNHLTERIAYENAVREQKMRAETAQNRRENTAFLKNVEKSKMIMDMEKRHAGKRQDKRDEAAASVRRVFRQKQTVADPEDAPSGVNADIVRR # PASA_UPDATE: g8920.t1, single gene model update, valid-1, status:[pasa:asmbl_2436,status:3], valid-1 NODE_1718_length_9527_cov_42.0575 . gene 2368 5922 . + . ID=g8920;Name=g8920.t1 NODE_1718_length_9527_cov_42.0575 . mRNA 2368 5922 . + . ID=g8920.t1;Parent=g8920;Name=g8920.t1 NODE_1718_length_9527_cov_42.0575 . five_prime_UTR 2368 2540 . + . ID=g8920.t1.utr5p1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 2368 2759 . + . ID=g8920.t1.exon1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 2541 2759 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 2935 3091 . + . ID=g8920.t1.exon2;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 2935 3091 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 3454 3531 . + . ID=g8920.t1.exon3;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 3454 3531 . + 2 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 3681 3809 . + . ID=g8920.t1.exon4;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 3681 3809 . + 2 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 4068 4174 . + . ID=g8920.t1.exon5;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 4068 4174 . + 2 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 4329 4499 . + . ID=g8920.t1.exon6;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 4329 4499 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 4724 4909 . + . ID=g8920.t1.exon7;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 4724 4909 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 5255 5392 . + . ID=g8920.t1.exon8;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 5255 5392 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . exon 5703 5922 . + . ID=g8920.t1.exon9;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . CDS 5703 5864 . + 0 ID=cds.g8920.t1;Parent=g8920.t1 NODE_1718_length_9527_cov_42.0575 . three_prime_UTR 5865 5922 . + . ID=g8920.t1.utr3p1;Parent=g8920.t1 #PROT g8920.t1 g8920 MADVVVKVEFPETQTQKTVKLIGADTVTAALEVIRKKFGSSAPDMSRYSLFHPARNLWLEASKNIGDYHLAANDVLHLLPTGSTVASYTGPVFGAPLQLSTQVNNYGSVPYPVLVENVFDYISRRAMDMEGIFRLSGAASQIQKYKEKFDKGEKVDLEECNDPHVVAGLFKLFLREMPEPLLTFSLFDVFVAAQSAPDLTERARYFRAAIAGLPAENRALLKRTAGFMLKLSELSSVNKMGLENLATMLGPNIMRKRGETVMEMVHNTAVINSTANDLIRLYPRIFEYEGEENIAGVARVVYRYEPQAEGELPLTEDSIVFLTRPDGGDGWAEGESGGWGGHFPANYIEVLFYTGVVIVPREPEPAAVQSGDEGPSISAAQFKEDIVRLQKKAKQIATSRAEQDPIVSMLADGFASLQKKVASLEAQNEALVAELAALKESVASRAAQ* # PASA_UPDATE: g8921.t1, single gene model update, valid-1, status:[pasa:asmbl_2435,status:12], valid-1 NODE_1718_length_9527_cov_42.0575 . gene 6475 9239 . - . ID=g8921;Name=g8921.t1 NODE_1718_length_9527_cov_42.0575 . mRNA 6475 9239 . - . ID=g8921.t1;Parent=g8921;Name=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 9038 9239 . - . ID=g8921.t1.exon1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 9038 9239 . - 0 ID=cds.g8921.t1;Parent=g8921.t1;5_prime_partial=true NODE_1718_length_9527_cov_42.0575 . exon 8477 8849 . - . ID=g8921.t1.exon2;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 8477 8849 . - 2 ID=cds.g8921.t1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 8055 8242 . - . ID=g8921.t1.exon3;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 8055 8242 . - 1 ID=cds.g8921.t1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 7503 7755 . - . ID=g8921.t1.exon4;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 7503 7755 . - 2 ID=cds.g8921.t1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 7149 7297 . - . ID=g8921.t1.exon5;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 7149 7297 . - 1 ID=cds.g8921.t1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 6843 6986 . - . ID=g8921.t1.exon6;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 6843 6986 . - 2 ID=cds.g8921.t1;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . exon 6475 6692 . - . ID=g8921.t1.exon7;Parent=g8921.t1 NODE_1718_length_9527_cov_42.0575 . CDS 6475 6692 . - 2 ID=cds.g8921.t1;Parent=g8921.t1 #PROT g8921.t1 g8921 VLYILYESASGYALFEATETEEIGLELASVQASISDLAKFGKVVKLKAFAPFQSAQAALENINNISEGLLHDHLKAFLEMNVPKSKGDKKSKFSLGVSDARIGAAIQDGLTISCQTNEVVNEILRGIRQHFGKIVKALKEGDVEKAQLGLGHAYSRAKVKFNVHRVDNMVIQSINLLDQLDKDINTFAMRIREWYSYHFPELVRIVNDNYTFARLVKFIKSRKSLNDDSLEKLEEIVMDSSKAKQILDAARTSMGMDISEIDMINIESFASRVISLAEYRKSLHEYLNSKMHTIAPNLSSLVGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTKGNTPKYGLIYHSTFIGRAGLKNKGRISRYLANKCTIASRIDCFTDNPTTKFGTKMREQVEERLNFYETGVAPRKNIDVMKEALAEAGQETPAGKKDKKRKADSDSEEEPASKKKKVEKKEDKKEKKEDKKEKKEDKKEKKEDKKEKKEEKKEKKEDKKDKKSKK* # PASA_UPDATE: g3306.t1, single gene model update, valid-1, status:[pasa:asmbl_7072,status:12], valid-1 NODE_4181_length_2065_cov_35.7442 . gene 120 1859 . + . ID=g3306;Name=g3306.t1 NODE_4181_length_2065_cov_35.7442 . mRNA 120 1859 . + . ID=g3306.t1;Parent=g3306;Name=g3306.t1 NODE_4181_length_2065_cov_35.7442 . five_prime_UTR 120 121 . + . ID=g3306.t1.utr5p1;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . exon 120 344 . + . ID=g3306.t1.exon1;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . CDS 122 344 . + 0 ID=cds.g3306.t1;Parent=g3306.t1;5_prime_partial=true NODE_4181_length_2065_cov_35.7442 . exon 544 689 . + . ID=g3306.t1.exon2;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . CDS 544 689 . + 2 ID=cds.g3306.t1;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . exon 897 991 . + . ID=g3306.t1.exon3;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . CDS 897 991 . + 0 ID=cds.g3306.t1;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . exon 1253 1859 . + . ID=g3306.t1.exon4;Parent=g3306.t1 NODE_4181_length_2065_cov_35.7442 . CDS 1253 1859 . + 1 ID=cds.g3306.t1;Parent=g3306.t1 #PROT g3306.t1 g3306 YENMMHSANIRLPLDWEPDRRKAFVEETIDLLGLRRVRNSIIGDEYRRGVSGGQRKRVNIGMEMVANPRIIFLDEPTSGLDSTSSLTVIAALKKIAQERNVCIATVLHQPRYDIFILFDEILLLGVGGRTVYIGSSQEVDQYFKDLGFTCPTLVNPADFYMDVIAGSIPLEGREFDGSRLFAMWEDFAVQRSGNPEALRKLEEKRARESAEKQRRLSSSEPVAAATADPEATERTPTCGESVRQFGRDFRDNLVFAFGSDPSAQIRVNARFFTQVYYFMVRTLRQYSRGPTEIAMALFMFFLGGTIIGLAWSGNSFETIYKGVPYAFLNGLNDYIGTLCAQDKIPSLVSNVVGILV* # PASA_UPDATE: g12543.t1, single gene model update, valid-1, status:[pasa:asmbl_5897,status:3], valid-1 NODE_332_length_26762_cov_42.7776 . gene 6730 9613 . + . ID=g12543;Name=g12543.t1 NODE_332_length_26762_cov_42.7776 . mRNA 6730 9613 . + . ID=g12543.t1;Parent=g12543;Name=g12543.t1 NODE_332_length_26762_cov_42.7776 . five_prime_UTR 6730 7015 . + . ID=g12543.t1.utr5p1;Parent=g12543.t1 NODE_332_length_26762_cov_42.7776 . exon 6730 9613 . + . ID=g12543.t1.exon1;Parent=g12543.t1 NODE_332_length_26762_cov_42.7776 . CDS 7016 9541 . + 0 ID=cds.g12543.t1;Parent=g12543.t1 NODE_332_length_26762_cov_42.7776 . three_prime_UTR 9542 9613 . + . ID=g12543.t1.utr3p1;Parent=g12543.t1 #PROT g12543.t1 g12543 MSAMLVRSNAALSCILSATQRARARCVVARDVAATSACMRRRLHTGCKGAASLCAVTCTRSGESRQGPHLPLTHGIAPPHFLVAPAASSVRFLSNTAGVFDVSKNAPPSSAQKATPASSITSVSASSTNEALVVDSDGSICLLDDLYIDVSGGENEEAAAKVRSTAAEYHFDATVGGTSANDAQITGDVSFAAEPDSADDLAQYKDSFSLSASSPSPPPPPTVPIQEVHSIEGLDFVPEPEIAPADFTPVADPPFFVSSPMINSLAATEQCPIVARAWPYNVVGHHPEDAYIGDPNKYVGLCFSSGGMRSASLTAGQLRALHSQGYMKYVKYISAVSGGSWASVPYTFLPTTFSDEDFLGDPKLPGELTVEDFEPPASFLHAVGTLDIPVNPLTLTSWIVEGDESYSNFLGKWLLWPFGLWDPDLTREKYFTLNKGTLRLILDRNDGKLSRDDFIIPREGRPFLIVGASLLIDSSLLPESEIPIEFTPLYSGMRVSTANAKVGGGFVESFAYDTEFGRSESDPPTIHSYSHPGKSRFTIADIIGASGAAPSQKFYATEWLLRTLSRIFPAFHHFPVGTVPLQKETQFKELVEYVHADGGVQENLGIMPLLARRTPRIVVFENTKMALDSAAVAADKITHSTIDISIAALFIGIPDNEYDGVGVGGSDYRGNVIFSSGCIYDERGVPGPELTGRALYEALVRRLNDRRLAGKPVNARGEYTVAYGSDAAKKYGIYPEFDPDTWEPRPYRVEIAWVYNELCDEWIEQLPPHLRRDDDYFHRDLDGDFAFTHRQFERFPHYETFREDGGFSVCGLRTHQAAALAHHAFYASSSCMDIDAIFRPR* # ORIGINAL: g12546.t1 original gene structure, not modified by PASA NODE_332_length_26762_cov_42.7776 AUGUSTUS gene 22979 25138 . - . ID=g12546;Name=g12546.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS mRNA 22979 25138 . - . ID=g12546.t1;Parent=g12546;Name=g12546.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 22979 25138 . - . ID=g12546.t1.exon1;Parent=g12546.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 22979 25138 . - 0 ID=cds.g12546.t1;Parent=g12546.t1 #PROT g12546.t1 g12546 MSALAVIDEAGSLLADMNIMADDSYEPRVQTDPSPMGHFARLPIHLVHELTSNGTFSPGVLRRLAQTSKGMRDLVYFIALAHPLSPWSRSAWSLRTSVVSPIRLLEIDEFVRHSCVEEFEQECVAIIKSQIPGNVRNCLEYSLVPTSYRKVDESERARAAEIACNATEVDKKVNAYIHRYECIDDHPWMKHLLDESKGEGATLDGMIEAATGDVTSVLSSFLVQQWNVRDFVVTEDDGIFRMYCAVADLTFTLCNPEHSTDGSSPEWLQIKLAGLEKEFPCSETPRYNADYAQLYSCFDESVALLSFRTLADAPGTFHDAGKSPFLRAFGQKENARSKAEAAALDREHISDDGEQQHSWDIEPMSDDFLAAIVRTFPGMPPARILYCIYLCIRLIGSERDRESIGCWMFDPLVVSDCADQWLLENCDMFDSEDEGEYEEVDEDAPEMHDRNDVRSRRGGGVKYDEGTLAQACTAMTGRTWLNGTTENELDIVGIGQYFDAHIRWLEDGAVSFAGMRLCVHSGDTAFRHPKWEPENDSYDEELILESEVLRLRNGCDDFDPCLNGTTHPLVMECVNDCFRMRGYNLDMTARKRPREAVDAVDAWAYPGNQELVDASSEARRKKAFCETGLPVKRAIAREALEAYFADEGKWAPDEGCSDVEDDRTDSDVDELEARRERAKKGSAYHAHILLVPSSDSESEGWESEGGWESDGGSDSVDAS* # ORIGINAL: g12544.t1 original gene structure, not modified by PASA NODE_332_length_26762_cov_42.7776 AUGUSTUS gene 12679 14429 . + . ID=g12544;Name=g12544.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS mRNA 12679 14429 . + . ID=g12544.t1;Parent=g12544;Name=g12544.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 12679 13968 . + . ID=g12544.t1.exon1;Parent=g12544.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 12679 13968 . + 0 ID=cds.g12544.t1;Parent=g12544.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 14154 14429 . + . ID=g12544.t1.exon2;Parent=g12544.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 14154 14429 . + 0 ID=cds.g12544.t1;Parent=g12544.t1 #PROT g12544.t1 g12544 MPFSRPKGRLAIAASLLIVIVVVAIISNTSSSAGPAAPDASASVLDRISFAVRGFGLGGPNVLASDRSDVDQMLYQSIAAYRALAAKTAPRDGWTKILVRGSSRATRFALFRDVGAQLGFRIELQSSKDDRGGIRTAPSRDYVGVMCIEITADECIAPSEYSRFNFVQRVSKIRGLIGVTYGKDAFCRTMMNALDGFAPKRSIAVTNDVNQLDFVFPCYILPMDMTALSTDNAAGRWAADQRWIVKPVDGQGGSGITVSDSLADLLRDTENKNSLAVVQPLLDPPILIDGYKFDLRVYALVTSITPLRLYIHDMGLVRFAAEPYSTGGDNSSSSSGVGRKTQFLTNTSINTSLKDMIDLLWPFSQFAEYLTSLGHDAAAVFKRIHSAIVRVFLAAEAALHSPTMFDNSHNYMLFGVDVILDPSLAPRVIEINRNPSMDRDGPAGSWYVEMKEKIARDLLRTVFGSGQCGGQLYRQLKDIGVIFVGPQSEAAGTLPAECVEGSSERWRCLTDADVRFLFEAK* # ORIGINAL: g12545.t1 original gene structure, not modified by PASA NODE_332_length_26762_cov_42.7776 AUGUSTUS gene 16051 22124 . + . ID=g12545;Name=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS mRNA 16051 22124 . + . ID=g12545.t1;Parent=g12545;Name=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 16051 16140 . + . ID=g12545.t1.exon1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 16051 16140 . + 0 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 16306 16336 . + . ID=g12545.t1.exon2;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 16306 16336 . + 0 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 16828 17078 . + . ID=g12545.t1.exon3;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 16828 17078 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 17308 17668 . + . ID=g12545.t1.exon4;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 17308 17668 . + 0 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 17931 18914 . + . ID=g12545.t1.exon5;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 17931 18914 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 19205 19386 . + . ID=g12545.t1.exon6;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 19205 19386 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 19695 19704 . + . ID=g12545.t1.exon7;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 19695 19704 . + 0 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 19903 20461 . + . ID=g12545.t1.exon8;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 19903 20461 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 20583 20762 . + . ID=g12545.t1.exon9;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 20583 20762 . + 1 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 21098 21276 . + . ID=g12545.t1.exon10;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 21098 21276 . + 1 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 21464 21487 . + . ID=g12545.t1.exon11;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 21464 21487 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 21844 22124 . + . ID=g12545.t1.exon12;Parent=g12545.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 21844 22124 . + 2 ID=cds.g12545.t1;Parent=g12545.t1 #PROT g12545.t1 g12545 MEAVKSHRVVTFGHLMSTSAAVRERGEHLRLCVEHINNKTDGYWDDLLPGVILAFITNTTGGCNPTVAVTSVVDQVLNANVFAVVGPACSVDTEAVAQVLSIPLFRRVQITPSATSPKLSDKTSFPLLSRTALSDAYQGRVLAALCARQGYRRVGIVRGDSSYGQGIAAVFIREADALGITIAAHETFVEAEIDPDFGPALSMILRQNVRIVLLVAQPSDASRLFLQALTMGLLDAKHQWILSDGPTSDQSFQPKLLNGTTITSEPIRNAMLGMIGVQPATGYGSRFDAYVDLWARLDSSYFDADGDRTTLNVYGPATYDACVALAMGLNSTLASGRTERDTDVLVAHVRNASFLGVSGSIGFDANGDRTSGRYNIFNFNRTVGKAIGSWVSSAGFALMREPFFSGGASSSPIDGSCPDDCTGEGVCDTDTGLCACNTGRVGLNCAAVAPEVLPEHATQRSIPCHRIAHYAFNASSVGSFIAVSLKTGRDVTTGQFDAQLFVSRTGPLLSVNSSQGLPGAQVDAMAADMQAFSLGIIGAGDLGVYYVDVYGTGRACPANYRLVLAVDPPSSPGSLPLAAIIVPSVFVPLVAAACAVVAAALRWQRRTIRALEDKVHVWHIEYADLKFGKQIGEGAFGVVYEGEYRGTIVAIKVLKTDDMPENTLSVENGISQAQGRSSSLLATLSAAQLVRDRCRTEGRLPAWSKGGARGRGADAHGTSGMSLSARPFLPSTGNSDGLSTARVTGSKPIAIDARTQPSARSILGGVVGALGRWVRVGLGEESSSGARDIDGGAGTSASPQLLQFVFEIETMTKLRHPNIALFMGASLNTPVKAIVVEYLQGGTLMDRLHSNADIPWAARVSYACDCARGMLFLHSASPPIFHRDLKAANVLLDNFGRAKVADFGISRLKSIRGGVSDYDATDSLCGTLFFMAPELFLDHNFAEHCDVYSFGVVLCEIASRRTPYSDLSSSFHSGAIIVMVVCENVRPAGQLPPDTPPAFRSLLDECLSQYPDKRPTFRKVLEQLSAIDRNSCAVQAEGQPSEF* # ORIGINAL: g12541.t1 original gene structure, not modified by PASA NODE_332_length_26762_cov_42.7776 AUGUSTUS gene 163 744 . - . ID=g12541;Name=g12541.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS mRNA 163 744 . - . ID=g12541.t1;Parent=g12541;Name=g12541.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 564 744 . - . ID=g12541.t1.exon1;Parent=g12541.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 564 744 . - 0 ID=cds.g12541.t1;Parent=g12541.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 163 402 . - . ID=g12541.t1.exon2;Parent=g12541.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 163 402 . - 2 ID=cds.g12541.t1;Parent=g12541.t1 #PROT g12541.t1 g12541 MLILLEYIPHGDLKRWVSSIPYTHRQAGSSTAEMLERFCRHIALGMAYLSQMRIAHRDLAAFALSSASGLQTMCLSAPGRLPIVNVTVKTLRFVISVLVALPSVCTNQPLHLFSIFIDPSVRVTPLFSTARNCMVGQDAF # ORIGINAL: g12542.t1 original gene structure, not modified by PASA NODE_332_length_26762_cov_42.7776 AUGUSTUS gene 1236 5465 . - . ID=g12542;Name=g12542.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS mRNA 1236 5465 . - . ID=g12542.t1;Parent=g12542;Name=g12542.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS exon 1236 5465 . - . ID=g12542.t1.exon1;Parent=g12542.t1 NODE_332_length_26762_cov_42.7776 AUGUSTUS CDS 1236 5465 . - 0 ID=cds.g12542.t1;Parent=g12542.t1 #PROT g12542.t1 g12542 MSTKRKHSGSIFPRTAVPHSCMCAPVCTRTGGTLTRFLAFCLLAVAIRGDRFLVANAADNQRSFVRIVRAVASGEDASAFGVLSVDDATSTVRFTLTSAQPPMLWSNGSTDATNAMDGLHHVSAVRIIVRATDFNAASGVKTYNRLEIDAASVPMSCSGGIDPSPVTIHVVEGSLALLNVAVDGCSASSATSLVKASSNASVSIFTATFRNLARVRVAEVSGMAHVTMTTIQLADSSMGAIANSDQCTADVPADFDRTTCAGGALLRIAGDKGSSASIDGVVASNVGCDASSSVDALCLGALLVVAGASKASVVALSASALVADGGGIAYITGYASLLIGQSDIQGSTALVNGGAFVLSGNGELQIIAGLSCTDTAAQSGLGGLAWVSESARLTIVGAVISSSLASSGGVLYVGGGSAEVSQCNVTDCAAGDDGGFITATGAAVHVTVSGGFFSGLSASRGGALFLDDGASAVVSLVDARDLSASDSGGFAFVVSDASLTLASSQLQSVTAVWGGVIDVEASGIVDVDLCDFAHVSCDRGGGFVYASTGGSIDIRRSTFDDSSAMFGGVIFADKRANVHVISTHAVNVAASRNGGFVQVQNAAMMRADNVTVVGAMASFGGAVYMTGASAELHAQSLTVSGAAASEGGGFAYVQEEAYLNLSRLALDNAYSRDGGAFMVIVSSMVDIGSSVCTNLAADNNGGFAYVGDASMRISELTLGASSADWGGAFVSEIAGHVSIDGCIADGVTARRTGGFAFVQESGSMHVSGLSLQNAAARDGGSFYVIGAGAITVTSSTIISSAAHVSGGALYVAGTYTMAAVAGLTIVRATAGGPGGAIHAELSANVDVDGCTAHHVSAGVDGGFASVWDSARALFRNVTVHNVTAAQSGGVFSAQRSAAISASGINASMVTAGDSGGLVAADSRSAITLTDLDISDVSANSGGAFSLSRATATVSSVRAVNVRAVAARGGFFSGLDGFVLIARDVAVDGARAGSVGGLLYAGGSGGGSVSLVNAKIQGATAQASGGCVYVEGDATVVLDGGTFDGCLAGADPSTLGAGGIAFVGAGALLRVVSPTQFVSPGAVLGPGVYSEGTALDLMSRTNVSLVGSVRVFSTGESLPGWRPGGLFAGTPTTVAVSPAGPLLTTTGALLPTIEIQLRDAFGALVSTNAREQLSVRIRLADVTGNTTGAVVLAGDVERSLGTGATVVFSALRLYGPAGTECTLALESANPFLYGRFDDNNRRKALLVRGSFRLHATIRDCATVGMQLGEADGLSTCVVGSPSAGSSGNSNVLAISLPIALVVGGAVIVACAVAFRWRFEKARMELSRATHADFLARHVAKQPGLAAVELKRADVEVLMDKKIGEGEFGIVCIARVLSGDRPRVCAAKMMKTGATFQQRCDFLEEAEIMQV* # PASA_UPDATE: g2260.t1, single gene model update, valid-1, status:[pasa:asmbl_4754,status:3], valid-1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . gene 1115 2096 . + . ID=g2260;Name=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . mRNA 1115 2096 . + . ID=g2260.t1;Parent=g2260;Name=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . five_prime_UTR 1115 1213 . + . ID=g2260.t1.utr5p1;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 1115 1391 . + . ID=g2260.t1.exon1;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 1214 1391 . + 0 ID=cds.g2260.t1;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 1503 1607 . + . ID=g2260.t1.exon2;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 1503 1607 . + 2 ID=cds.g2260.t1;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 1859 2096 . + . ID=g2260.t1.exon3;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 1859 1992 . + 2 ID=cds.g2260.t1;Parent=g2260.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . three_prime_UTR 1993 2096 . + . ID=g2260.t1.utr3p1;Parent=g2260.t1 #PROT g2260.t1 g2260 MGVVVHIVLFKAKADAKPADIALMVSSIKALKKAVPNVIDLSIGAQDSKIYQNYKERCHGFTHILVVKFPTSEALQEYALHPEHQRVVREHVLPNTSDILAVDYTDRESAKCPGIFKWGGIVAGLVAAGAIGFALGRK* # PASA_UPDATE: g2261.t1, single gene model update, valid-1, status:[pasa:asmbl_4753,status:12], valid-1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . gene 2399 4073 . - . ID=g2261;Name=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . mRNA 2399 4073 . - . ID=g2261.t1;Parent=g2261;Name=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 3900 4073 . - . ID=g2261.t1.exon1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 3900 4073 . - 0 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 3740 3805 . - . ID=g2261.t1.exon2;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 3740 3805 . - 0 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 3383 3636 . - . ID=g2261.t1.exon3;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 3383 3636 . - 0 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 3159 3192 . - . ID=g2261.t1.exon4;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 3159 3192 . - 1 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 2829 2907 . - . ID=g2261.t1.exon5;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 2829 2907 . - 0 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . exon 2399 2592 . - . ID=g2261.t1.exon6;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . CDS 2528 2592 . - 2 ID=cds.g2261.t1;Parent=g2261.t1 NODE_2666_length_5516_cov_42.6409_potentialcontaminant . three_prime_UTR 2399 2527 . - . ID=g2261.t1.utr3p1;Parent=g2261.t1 #PROT g2261.t1 g2261 MSSSGAKKLPSGSSSSSSPSSSAKTASSKQQIKAAVSNSAKLVGSKGGRKPTAAEEEEACLNSLQRELEESSRKEMEKDERPSSNVSYDIEGALAEELNNASRELDGEDGGKRKGGSAVAKGGKVNSQKASARKAPKRKDEEDEDDYAQKLEASIARAPVSKSNRFEDDDQLEAVRVQNAIESMVDMELSHDMNDDDNCDDEDGDDIGRRIEASIQSNIRKKK* # PASA_UPDATE: g4130.t1, single gene model update, valid-1, status:[pasa:asmbl_7334,status:12], valid-1 NODE_4453_length_1598_cov_36.1904 . gene 153 1482 . - . ID=g4130;Name=g4130.t1 NODE_4453_length_1598_cov_36.1904 . mRNA 153 1482 . - . ID=g4130.t1;Parent=g4130;Name=g4130.t1 NODE_4453_length_1598_cov_36.1904 . five_prime_UTR 1401 1482 . - . ID=g4130.t1.utr5p1;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . exon 1248 1482 . - . ID=g4130.t1.exon1;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . CDS 1248 1400 . - 0 ID=cds.g4130.t1;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . exon 967 1137 . - . ID=g4130.t1.exon2;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . CDS 967 1137 . - 0 ID=cds.g4130.t1;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . exon 517 795 . - . ID=g4130.t1.exon3;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . CDS 517 795 . - 0 ID=cds.g4130.t1;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . exon 153 277 . - . ID=g4130.t1.exon4;Parent=g4130.t1 NODE_4453_length_1598_cov_36.1904 . CDS 153 277 . - 0 ID=cds.g4130.t1;Parent=g4130.t1;3_prime_partial=true #PROT g4130.t1 g4130 MSDEGDSVGVGISLGGTYASVAVCRGKAVDVVCSEDGDRVTPAHVAYVSGHEPVIGNAAKNELVRNPVNTVYGARSILGRPFDDPAVQALKKQLAATIVEHEGSAAYEVDDDSGSRKIRTASEVTTLLVRRMKEIAEQNVGSPVTSAVLTAPINYGPQQRAELKKAAEAAGIKVLRIISEPTAAVLAHMPDIGRGDSKNVVVFDLGASSLEVTVLAVRGGVIRILSTLSEPSIGGSAFDERL # PASA_UPDATE: g9644.t1, single gene model update, valid-1, status:[pasa:asmbl_10198,status:3], valid-1 NODE_978_length_15157_cov_42.1896 . gene 10346 11894 . + . ID=g9644;Name=g9644.t1 NODE_978_length_15157_cov_42.1896 . mRNA 10346 11894 . + . ID=g9644.t1;Parent=g9644;Name=g9644.t1 NODE_978_length_15157_cov_42.1896 . five_prime_UTR 10346 10396 . + . ID=g9644.t1.utr5p1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . five_prime_UTR 10661 10676 . + . ID=g9644.t1.utr5p2;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . exon 10346 10396 . + . ID=g9644.t1.exon1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . exon 10661 10758 . + . ID=g9644.t1.exon2;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . CDS 10677 10758 . + 0 ID=cds.g9644.t1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . exon 11087 11221 . + . ID=g9644.t1.exon3;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . CDS 11087 11221 . + 2 ID=cds.g9644.t1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . exon 11441 11573 . + . ID=g9644.t1.exon4;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . CDS 11441 11573 . + 2 ID=cds.g9644.t1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . exon 11720 11894 . + . ID=g9644.t1.exon5;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . CDS 11720 11735 . + 1 ID=cds.g9644.t1;Parent=g9644.t1 NODE_978_length_15157_cov_42.1896 . three_prime_UTR 11736 11894 . + . ID=g9644.t1.utr3p1;Parent=g9644.t1 #PROT g9644.t1 g9644 MADTGSLEKHIADRPAPEELIEKNILKANVDVSPAIVAKQEEFKHAQRRDSLEAKIAHRPDVTELTRVNILHGDGHSAPAIQATQDKLKMRRLSDAIEDHLESRPPPEMVPKRILEGVEHH* # PASA_UPDATE: g9645.t1, single gene model update, valid-1, status:[pasa:asmbl_10199,status:12], valid-1 NODE_978_length_15157_cov_42.1896 . gene 12397 14220 . + . ID=g9645;Name=g9645.t1 NODE_978_length_15157_cov_42.1896 . mRNA 12397 14220 . + . ID=g9645.t1;Parent=g9645;Name=g9645.t1 NODE_978_length_15157_cov_42.1896 . five_prime_UTR 12397 12517 . + . ID=g9645.t1.utr5p1;Parent=g9645.t1 NODE_978_length_15157_cov_42.1896 . exon 12397 14220 . + . ID=g9645.t1.exon1;Parent=g9645.t1 NODE_978_length_15157_cov_42.1896 . CDS 12518 14035 . + 0 ID=cds.g9645.t1;Parent=g9645.t1 NODE_978_length_15157_cov_42.1896 . three_prime_UTR 14036 14220 . + . ID=g9645.t1.utr3p1;Parent=g9645.t1 #PROT g9645.t1 g9645 MASRSTNKRPASDDVRTSPAQVRRCGTESAQEEATRMWKALADNSLHNYWEAQHFAKSFIVSLELRGKVKEQDLIDAIFSAAKRDANDTTPLVFAELNAFISGSNVDLRETIENRVTHFLDEKTRTTYGHSPSNGPTDNHGIIDSGHPTGSTGDGSSQHMDVYNWSSSDLNGDAAIDLPVDWIGSHSPEPSGSGDAAGSIDLRPLVEEEWETVKVKASTDIIAFVCHAKPVTGVDAESVSRIAQVYTHALEALLGREIASGFVAVRNAVAHVMRIFPDCAAIQKAGCTLLIHINDKAGEKSVSNTDSANAIIGALDRHCSNEETALTAVLALDRVVRKRGSTVRTLAAHGHLVVKAMEAHPDCVGMQVAALDALDSIAAARPVEMRKSSPNMVASDVQQQSVNFPFVHAVADALDRQGRLEPQNQALEAMHHASMFFGAVLLRPVFQNPEHVEQTVAMAAVAAAAMVRALSHMSDATLQDPAFPFSREIIRKEADSLVNELKKIA* # ORIGINAL: g9643.t1 original gene structure, not modified by PASA NODE_978_length_15157_cov_42.1896 AUGUSTUS gene 1608 9815 . - . ID=g9643;Name=g9643.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS mRNA 1608 9815 . - . ID=g9643.t1;Parent=g9643;Name=g9643.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS exon 1608 9815 . - . ID=g9643.t1.exon1;Parent=g9643.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS CDS 1608 9815 . - 0 ID=cds.g9643.t1;Parent=g9643.t1 #PROT g9643.t1 g9643 MSQQQRSLTNTGLGSSSPLLSSDGNRSAVLSTSGTQRSLLSSVSGKSSTNNTTSSLLAGSRSAHVSSISTSASSSLRSTAVPTSRLHSSVDSMHSLDGRTTASLRSLVSTVPSTPSSLASSGAAPGGYSTSATTQRLNLGGSDALLGRYRAQPTHASSATVAGNSALLSTTAPIGRTATLTSSNLSTLTSRPAFLRTTSNDSQSVSSLQQDVAQFMYDDDPADYADDAPLGMNRMDEGTLKLLSSATDDVAETILVKEGSTDTVTGASGAEISAAALKRELLNALAGSLIREPDFYDRENATRKAIVDLAAQVAEFDGEFLLKAALYTRLELNIRSTANFLLALCAHIDTARPHLRRYFNASIRLPSDWLEVAQYSQTIHGRIGQSQFEARDVQLGAIPSSLRRAMLEKFGDFDDYQLGKYNKDKSKSKKAGDKKGDQKNARGKANAAKDAGNDSGSDAEGEGRGDVAAAGDDGETDPDGERPVKLEFTIKQMVRKLHIVQPANRVMSILGKRYPDTLDKFISARLDGVFEASRAGQRMKLPVPETWETQVSMHGNNASTWESLISARKLPYMAMLRNLRNLLKANLQKKFHGMITSRLQDEHQVRNSRQFPLRFFSAYEALEDCLRPPPEPKAGGNGKRKPPKPFVPVDPALVARYRTALDGAIRVATLVNVPPIKGRTLVLCDASANMWSVCGSAKALGKPRSMVEVGLLLGLMCRQACEACELHAFGTGANPHGSLCLALASASSDNILTSLAEMVRAVQAEGGPNTTATQLPDSVVQRMLRERAHIDAVIVLGQTLPGGTNDFLAKYHALINPDLLFVLVDLAGAKVSADSMGDPEYAEFARHPNNVRVAGYSDSILRFVAERGDSSLIKHVEAIGVKHGIAPFVPAATRMEERMEKREQERGGGLGSLRTTPTGKQAASADATAKANKAVEDARSRAAKKAPPTKRRSVRVFISSTFLDMHGERDLLTRFVFPAIRERCERFGLSVHEVDLRWGVPARAVAGKGALEACLTEVERCRPFFIGILGDRYGHVPSPQDRMAAVTNDATGILSWLTSYPLDRSVTELEAHFGALAEPSAAAGRAFFYLRSAALLSEVPPEHVSAFAAEGPAAAQSMAALKSRIRASRLPLFDNYPCKWGGVVNGRPSAGALGAFGSRVAADLWSAIRAEFGIGSAAWSLMREKTLADGADRLTARALDEAAVHEALVDARAAAFFGRRQLLRRLHRAVNASCGGHIVVTGKSGAGKTALLSVFAREIAAARGERAIVVHCVGAAPGSADVRCILARLGHVLRQRCGEESKGQDSTDVAALSAEFLRALRLASASSPEGLIVLLDGLDQLDATHAARSMGWLPSVADVPPNVVIVASVSDGEPLVALRSRLEKRAKEIEVGALSPADRTDIVRGTLGLYRKTLDETSLGDQMRPLIAKRDAALPLFLALACEELRVFGVFERVSERIQSLPSSLPALVEDALGRMELDHGRPLVSAALAALVCSREGLSESELLVHLGRHLRQARDPLPRGLWAPLRCALTAFLAPDVSDASGAENVVAITHGELSRAVMRRYLPVERDRVTCHKALAESFRALADPSAAGAFKGTSARAFVELPHHLAEAHEWKALQSLLCDLRFVAAKAALGLINDLVADYVIGDATGRDLKRALGDERVVAFGAFVTRSAHVLAAHPTLAVQQALNEPDGTAPNTAARAMLGLVVALPAAVPSTRSARVTTSAGARTPTSASLSASNTESSLKHASVVALDNKDSGLDPCEMTVRPSGGVEIVAMAVCPSDDRNAAYGDSDGAVVLSDVVTGKVVRSVAHAGGAAVASLCFAGRSRLCVGRVNGHVEFHNLEAGCVLSVATTAHGGKHVTCVASDPQGGLVASCGWDGRVVMWNPKTGSAGDGTAPDWTFAEPSSRPLQSITFDSEGRRLAAGGWSTTVVVYDTANRTSAYLRFATDDAASLLCNDGGSSSSDSPFSVRSLCFSPDDKRLAAGTLDGRVAVWSVDSSSLLAAFRACDNTPAHSIAFSPRGHVLAVGAGDGDVHVWSGHLGRSLTSIVDPSAITTLQKENPECAWGSLSARGYALAAVPSPDGTRFAVGFHLGCAAIVNRFGEVIAPLIRESTSPSICAAWAADQVVIGCGDGKIRSFLASTGAAGVVFAGHEAAVTSVTYCASRSLFASTSNDTSARLWRITGGGVTCVHVLRGHEAPATSCSFNAAGDRLFTVGRDAAIVCWNVVSGTCVFTLPSAHADWINSVSVSRSGYIMTASNDFNAKVWRSAGGSLEEVCVLRGHTGAVLSCEISDDFGTIAVSAGADGTVRVWQVLTASEVTCLAGHGGRPVVSCAFVARDSSDDAGGASLRVVSSGDDGAVRAWAPLKPCLRARFGGHSRAVRGVAFASSGRLLSCSSDASVRRWSPAPFEDVSEVVSAPADAMSHSSSVSHVCFREDGGAALSCSRDGSIILWSVEAGKVTPTAMTVCAYAVNGVAFAGKTGSSFVAVCDDGTLRSFEHTAAGIRPVNSVRAHEGPASAVACCTSRRLVMTGGWDGLLRIHAADTLASVGTISHHSNWISSVAVSDDGLFFTAASFDGTSSVWRTATLSALRGAQISKTEPSAKFSVPVAAMGAKRPWLITTVFGSSTAAFSVDARGVCHAWNVTTGLIKRSFRMTRGRATHADVVDSRVVMAFADGVVRFYNGNNMPLDAEFVARAPCTAINGRGPGGMAAVGDSLGHVYFVRVVGGVASV* # ORIGINAL: g9642.t1 original gene structure, not modified by PASA NODE_978_length_15157_cov_42.1896 AUGUSTUS gene 143 685 . + . ID=g9642;Name=g9642.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS mRNA 143 685 . + . ID=g9642.t1;Parent=g9642;Name=g9642.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS exon 143 685 . + . ID=g9642.t1.exon1;Parent=g9642.t1 NODE_978_length_15157_cov_42.1896 AUGUSTUS CDS 143 685 . + 0 ID=cds.g9642.t1;Parent=g9642.t1 #PROT g9642.t1 g9642 IHIDSYDAENLLSWPAVLKDIDCNTATAESVNNIAADLTFKCIGSDELNGVLVWFDVAFAGAPSSSPAPTVATATATTTTACGGGTHPIPPLYGALGVPSSLILQTSPEVPPTHWRQAALYLDDPVRVKQDDVVCARVEMSPHPTNRRLFDVRLKIRVNDGEEVGKTFRDATWVTHEPQQ* # PASA_UPDATE: g424.t1, single gene model update, valid-1, status:[pasa:asmbl_2765,status:12],[pasa:asmbl_2766,status:12], valid-1 NODE_1836_length_8986_cov_52.4172 . gene 146 4678 . - . ID=g424;Name=g424.t1 NODE_1836_length_8986_cov_52.4172 . mRNA 146 4678 . - . ID=g424.t1;Parent=g424;Name=g424.t1 NODE_1836_length_8986_cov_52.4172 . five_prime_UTR 4382 4678 . - . ID=g424.t1.utr5p1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 4139 4678 . - . ID=g424.t1.exon1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 4139 4381 . - 0 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 3855 3928 . - . ID=g424.t1.exon2;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 3855 3928 . - 0 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 2877 3504 . - . ID=g424.t1.exon3;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 2877 3504 . - 1 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 2216 2380 . - . ID=g424.t1.exon4;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 2216 2380 . - 0 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 991 1831 . - . ID=g424.t1.exon5;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 991 1831 . - 0 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 471 571 . - . ID=g424.t1.exon6;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 471 571 . - 2 ID=cds.g424.t1;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . exon 146 268 . - . ID=g424.t1.exon7;Parent=g424.t1 NODE_1836_length_8986_cov_52.4172 . CDS 146 268 . - 0 ID=cds.g424.t1;Parent=g424.t1 #PROT g424.t1 g424 MSRMRLHDSGAHSHRQAKQASHLRNNDANDVNFQGEDGADGNAANNGELDVTPFVDASRAERARRVITEQFEREIELRKEELTIIENNLFETQTLLDKLRVAILSSDDRVRRRKPEEAGALSHNTPLLSTRPKAPAANTSDPLFGRREDGSFFRYVCPACKRDHFVNGGGFIAHCRIAHGFVFSSIEHAARLCGQTVAETDVPPLDACRTRIDIPLIPSHPSVLVPVDFSPAAPRGAGAEGGGSRGSLGNIKADLSAVGEDGGSRFYVTKRIIVGNTSKYIPPDKREADDESTHKWMVYVRGPAQAPSVSHFVKKVWFFLHPSYRPNDVVEVSSPPFQLTRRGWGEFPVRVQLHFVDSRNKPVDIIHSLKLDRTYSGLQKLGTETIVDVELNRFYADGTGTTAGLTGSTQSDLPNATAPPHSNSNINSGDLSAVNGGHKEEVDGTPALNTASSAPSDVPNDAGEVRLREDADTTGERRTLERRSRGYDNADGSEVDDSGAVLSARAGVRADESAVDGMKHGGAAAEGGRSDERALNDSHVAFEEMIRRRKQILARQAQMHEHHPGSAGGTALDGDGGVAGSRAEDAGYVRVHGANTSGSAAECEDVRLRCAAGEDGGMHEDGIRGDAVSERTERRLIACVRQFPLIVWDGDAMTDHDRQRLSYRTANSLHAFLSWPVGKRKSAEWQRARCIKKRMAAHGDVLSTRTVMRSVPVALKWTLLGAYA* # PASA_UPDATE: g425.t1, single gene model update, valid-1, status:[pasa:asmbl_2767,status:12],[pasa:asmbl_2768,status:12], valid-1 NODE_1836_length_8986_cov_52.4172 . gene 5580 8813 . - . ID=g425;Name=g425.t1 NODE_1836_length_8986_cov_52.4172 . mRNA 5580 8813 . - . ID=g425.t1;Parent=g425;Name=g425.t1 NODE_1836_length_8986_cov_52.4172 . five_prime_UTR 8803 8813 . - . ID=g425.t1.utr5p1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 8659 8813 . - . ID=g425.t1.exon1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 8659 8802 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 8380 8535 . - . ID=g425.t1.exon2;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 8380 8535 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 7838 8002 . - . ID=g425.t1.exon3;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 7838 8002 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 7476 7632 . - . ID=g425.t1.exon4;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 7476 7632 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 7179 7294 . - . ID=g425.t1.exon5;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 7179 7294 . - 2 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 6922 7008 . - . ID=g425.t1.exon6;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 6922 7008 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 6326 6715 . - . ID=g425.t1.exon7;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 6326 6715 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . exon 5580 5929 . - . ID=g425.t1.exon8;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . CDS 5747 5929 . - 0 ID=cds.g425.t1;Parent=g425.t1 NODE_1836_length_8986_cov_52.4172 . three_prime_UTR 5580 5746 . - . ID=g425.t1.utr3p1;Parent=g425.t1 #PROT g425.t1 g425 MWAPVSPEDALELLDSQFADSQVRAYAVTCLESLGDDKFVQYLLQLVQVLKYEGHIDCDLARFLLRRALRNRRIGHYFFWYLRSEMHLPDVSVRYGLLLEAYCRGCGGHMQMLARQTDAMTKLVEIANLIKKKSLDTREKKLAVLREALDGLKLQPFQLPLTPMVVVNKLRPDRCSFMDSKKLPLWLVFENDDPTGKDVYIIFKSGDDLRQDMLTLQMIEIMDNLWQQNGLDLRMLPYGCLSTGDQVGMIEVVLNSNTICNIQKEKGGGARGAFKDEPLHKWLQDHNPDASDFEKAVENFTLSCAGYCVATYVLGIGDRHNDNIMMTKSGQIFHIDFGHFLGNFKSKFGIKRERVPFVLTPDFVYVMSQKEGTKGERFKKFKELCKRAYQILRQHANLFINLFAMMLSTGIPQLRTSEDINYLREALCLTMTEEEAAVQIEKKIDEALANSLSTRLNWAVHGMVH* # ORIGINAL: g8173.t1 original gene structure, not modified by PASA NODE_2821_length_5057_cov_39.0257 AUGUSTUS gene 147 4599 . + . ID=g8173;Name=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS mRNA 147 4599 . + . ID=g8173.t1;Parent=g8173;Name=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 147 243 . + . ID=g8173.t1.exon1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 147 243 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 341 428 . + . ID=g8173.t1.exon2;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 341 428 . + 2 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 682 766 . + . ID=g8173.t1.exon3;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 682 766 . + 1 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 951 1109 . + . ID=g8173.t1.exon4;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 951 1109 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 1446 1739 . + . ID=g8173.t1.exon5;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 1446 1739 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 1905 2051 . + . ID=g8173.t1.exon6;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 1905 2051 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 2265 2374 . + . ID=g8173.t1.exon7;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 2265 2374 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 2496 2568 . + . ID=g8173.t1.exon8;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 2496 2568 . + 1 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 2819 2999 . + . ID=g8173.t1.exon9;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 2819 2999 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 3285 3397 . + . ID=g8173.t1.exon10;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 3285 3397 . + 2 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 3801 3973 . + . ID=g8173.t1.exon11;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 3801 3973 . + 0 ID=cds.g8173.t1;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS exon 4385 4599 . + . ID=g8173.t1.exon12;Parent=g8173.t1 NODE_2821_length_5057_cov_39.0257 AUGUSTUS CDS 4385 4599 . + 1 ID=cds.g8173.t1;Parent=g8173.t1 #PROT g8173.t1 g8173 MPLLTSLHLGNNSMTSIIPDTIGHLSQLEIFCASGNGIVSIAPDVANAHNLRHIFLANNKLSNLPHELCKLKHLQSVDVRDNNISWQHMAMSPRQEWHWSENPTLTHLDISGNRRLVVDLEKEFSNLHMAKWIDLEGTRRIGTVPARLSKVISDLDALTQSSNSSNLREKRTNSTGQSVPGTPASLSTPASAVNVASEGSAVGAQASSQSQSQLTSSGGALSAGASGLSSVPSVDPEHPQNRPLSWRSGVARMSTDGDGDAITCSLRIHGFDRNPNDAVFALFDGQGGEAVPSHLAERFVPTLRDSLTQTNGQVSRSLRRTFLALNRSIGTLPDAKCSGASGVAVYIAGNKVHVANAGDSMAVLCRDGKPLVLSYSHVTSDAAERQRIRCLGGYLGGPDGSRVNGILPMTRGFGYTLLQPCVNSSPHVTETELTDADEFVVVACGRTWECITAQQAVSLARREHNPARAAQRIRDYAWMVGGVGNITVIVVFTPKASNSSLRHKSTRGDGRFSQQQLNRIIDEIPPPTGSVALVFTDIKNSTALWESREEGMREGVKMHNELMRRLLRVYNGYEVKTE # ORIGINAL: g8206.t1 original gene structure, not modified by PASA NODE_501_length_22225_cov_42.3644 AUGUSTUS gene 19685 21489 . + . ID=g8206;Name=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS mRNA 19685 21489 . + . ID=g8206.t1;Parent=g8206;Name=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 19685 19735 . + . ID=g8206.t1.exon1;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 19685 19735 . + 0 ID=cds.g8206.t1;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 19976 20005 . + . ID=g8206.t1.exon2;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 19976 20005 . + 0 ID=cds.g8206.t1;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 20425 20775 . + . ID=g8206.t1.exon3;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 20425 20775 . + 0 ID=cds.g8206.t1;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 21193 21489 . + . ID=g8206.t1.exon4;Parent=g8206.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 21193 21489 . + 0 ID=cds.g8206.t1;Parent=g8206.t1 #PROT g8206.t1 g8206 MSNRTRSVSDASHRKGVLGDFGSKFKKMMGTGGRDVPESISAPASSTLLSTRDIPNPNPNPSPSDVGDGSERAPAHRPSFQADMAIASGGGPAAVDVINEEWVEGEGFAGRAPRKGSAKLEKFFGSDPSRGRLATATPPTVPKNSLPIISDASPTDDVSRRSSDKLGKFFGDAGGGHVLRQPLRHFLDSLSVYGDVAVVTATHEFSHLREALWREVVAPDVFAAMTAEERQLCDHAWEIFTTQ # ORIGINAL: g8204.t1 original gene structure, not modified by PASA NODE_501_length_22225_cov_42.3644 AUGUSTUS gene 14119 16753 . + . ID=g8204;Name=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS mRNA 14119 16753 . + . ID=g8204.t1;Parent=g8204;Name=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 14119 14251 . + . ID=g8204.t1.exon1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 14119 14251 . + 0 ID=cds.g8204.t1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 14525 14691 . + . ID=g8204.t1.exon2;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 14525 14691 . + 2 ID=cds.g8204.t1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 14922 15050 . + . ID=g8204.t1.exon3;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 14922 15050 . + 0 ID=cds.g8204.t1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 15762 15972 . + . ID=g8204.t1.exon4;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 15762 15972 . + 0 ID=cds.g8204.t1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 16210 16315 . + . ID=g8204.t1.exon5;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 16210 16315 . + 2 ID=cds.g8204.t1;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS exon 16576 16753 . + . ID=g8204.t1.exon6;Parent=g8204.t1 NODE_501_length_22225_cov_42.3644 AUGUSTUS CDS 16576 16753 . + 1 ID=cds.g8204.t1;Parent=g8204.t1 #PROT g8204.t1 g8204 MWEVYSENLVRRYYARSNSVAFALSVLYRGLMIVLPFVAAYAMQGFWLTEATYVEQPNVHFKHSLVAVLEGGDPFTSLVWSSFPDVNRLSQESIRVPVVQSYEVDNNQDGLNDQLKLTLTFPMNDDEVVTGVKLLVFFDYRLSRKLRLVMESMAYLEYSAGVGGSQLFADGSLVLRQRAPIAYRSTRTLYNTTIISKPDITFPEIFSSYLDRNETTEYVPPYRVWTAGRASGQPFVITATVRYPEQTIVFKPGFWMIIKFAWIQYMCIAAIFFGAFRYVRKYVYGSQMVPTFVSPDKHSINPRPHIS* # PASA_UPDATE: g8203.t1, single gene model update, valid-1, status:[pasa:asmbl_7809,status:12],[pasa:asmbl_7810,status:12],[pasa:asmbl_7811,status:12],[pasa:asmbl_7812,status:12], valid-1 NODE_501_length_22225_cov_42.3644 . gene 1 12942 . - . ID=g8203;Name=g8203.t1 NODE_501_length_22225_cov_42.3644 . mRNA 1 12942 . - . ID=g8203.t1;Parent=g8203;Name=g8203.t1 NODE_501_length_22225_cov_42.3644 . exon 12828 12942 . - . ID=g8203.t1.exon1;Parent=g8203.t1 NODE_501_length_22225_cov_42.3644 . CDS 12828 12942 . - 0 ID=cds.g8203.t1;Parent=g8203.t1 NODE_501_length_22225_cov_42.3644 . exon 12096 12674 . - . ID=g8203.t1.exon2;Parent=g8203.t1 NODE_501_length_22225_cov_42.3644 . CDS 12096 12674 . - 2 ID=cds.g8203.t1;Parent=g8203.t1 NODE_501_length_22225_cov_42.3644 . exon 1 11894 . - . ID=g8203.t1.exon3;Parent=g8203.t1 NODE_501_length_22225_cov_42.3644 . CDS 1 11894 . - 2 ID=cds.g8203.t1;Parent=g8203.t1;3_prime_partial=true #PROT g8203.t1 g8203 MRAAVTRLRFGGASVVVWILVALAYTTITQAASSGLTPASFNDNLVGNVWKSGCAAWGAPLPEHTKLYAHHTITFNGTRFTHELGVFVDDRCGESLFTSTISGYTCVPKSTDVVSDASPLTFIVTSILVDNRDEIVRACGLRNANEISLDRRELLIAEDGVPRDRHCIDSGSVNFFPTNDKCKWRDMRISIVDGDVKKIAIHGGAFWRYNACEKRTTSTPEDVVVLQASRGDQFDAPEAASACPLAVYIPSTTLTGGLAQARLELTEDIVHNVTLVFFAGVETSGDIVYRMESDPEMSPSAGIDDVSPFMGTTSVMDGLDSDVFRVVATADNIAEREEYGRYTFTATLPLIIQSPHVPFVIKASGSPLGVFSLSETIANVSTADINYLFRIDRADGADGNVGISLALVGSFGSRTIAVSFASGQTVLYGRMPLPGNMPPRSSFTLSLASFTYRSDADQGLASTGDGECAIRVVGVEGDIFGHIGMSIASASLPLGARSHALSVTRSGGVDGTIRISFAISAPVGAVLSAGDYWRASDSKGDFFIRDGATSGSLSIDFGKDISLDTTVNVTLTAAYMGAALLDGALITELSFIDMYGSISFSSSNTAAYVSDYSVVLPLVRAVFQSGQVRVAISLSDAPNLRFPDGSLYSEVVFEDGESSLDVLLLIAEAPDQGTTATVAIDYISGKGVVSIPSEVTVSFITPRFVDAVAFLLEAYEDSSLSRGAFVPIRRTLSTDTEPFSTLEVFYRVDCDGCGEASISHITLPVGVRAVALPVTHQVEGASAVNVTLLGVNGGAHPGVPATAHVSFTASAETAGFVALDFTVLRVPPGAINFWIPFTRTKSSAEAVVFAIVDGETDRDGAATYMLSATVGPVPVTLPLVPTFSNSLTVSILGVNGGPVFLGNSTFTVLSEYTDEYSFVSIDASEFFFYPDSIGRDGEDGRVWVGRVAIAMRRDGAVSSPVSCEYAVSLPTSRRSAGVQITPSAGVVSFASGVVRQTFDVEFTFDFEIESSLDFSLQITSATNAFALSGTSLATVVADSTPIHGAFRLLAEDDTSATEVVVDDAPVIVTLVVHRRGGFSGRVAVACKTQNVFREGDALPFIDFVPVEESVIFEDGQTLAEVYVTVLGSVHPGGTRVSFTVSLTAVELTATPSTSFGPTPTLHSTFTAYPTTATPTVDFDPLSLMERSEPSFEYVDFSMHEAPPLLSSVFDTVKIDIVTKADISDRGVFVFSPLSTFVSVNGTQADGAPTVVTLFVERINGSQQAASVLWTASEPVDGDFADDIAVHRGSVDFAAGESVQAISVLLSPDAFPEFDEYIHVRLTNTTIGSLGTEAETSATIHVRLHDHPVASVSILSDTRDVTGRAYGFVTISVVMASPFTFGTVGWRVLAVAGNGGIEPADAFSPSAGEISFTAEVTRADILLEVLVALEKRPGSTWVVELYELSDRPDFVVDTEASRAHVTIIGDYPGVFYFAPNSTYVVAEESTDKNATTSVTFWVERSFAGPTACTVMWTACSFANGECCDAGLSEELDLSPLSGFVMFGEDDTEAFFVVEIPADDIPELSKAYAIHISLMCNGDVGLSNASSYALLTVPESDNPDGRVGFEKALYTVDTQLETVATILLVRTGGALTEVTFLVYTISINAVPDSDYLTRSAAVVFGVGEFTREFVVPLLGGGVATAGQAVVRSFDVLLTGLSQNAHVGAVDQTRVDMEFTKPGTFSIVPGAVVALEGEAVPIVVRRRDGFWGEVTVSWMTTANEGDLIPAEGVVTFAEGQDEATIIVWVAEDGTPELAERYSVLLTGASAGDIAFDGANSTSYSVVIAANEVPLGTFSVSTVSALVTVDEETSVVATILVERTMGALADVYLGFEINTITAALGEDIVVPEAPQILFVESSRSGFIDIGIVNDNIPEATETFRVRLSAAWPRDRSLIVSSETIRDPVLAMMVVPPPHVVYNTTALVDIKPNDFPAGIAQLFSSESHVAEGGCITLTVSREVALMSATYALNITFPEGSGAYEQSGSAEDISLENGGVLTLAEGELSGTLLLTVVDDGAPEWDEPLDIFLVPTSEYAAVASPEVPLHLVIDASDDPFGLFYIVEGGDVVNLSEPDSEFGLPATAHFTVQRDQGSSTEIVATWVALDDNRDPSADITPNSGSIVFPAGVSTLGFSVSAINDNVPELEETVTIVLASAAPGRIADGLNLTTVVISPSQYPLGRFSIKTPTIKVSETMGNTTGEAVIVVERTGGAIGVVVVDVTTESLSAMLHDDYEPGVLTVVFEAGQREAEVRIAINADGIPELDESFVVELAIATLKSTDISTIATPVVTQDPCVVTIELNDFPAGFAAFSVGTVAVDEDAGVVNVTVIRFGGALLPLTVRAELSFRRESASGADAALAEGDHCEITFEAGQATADFSLTIVDDSEPEGNEVFDIVLSVEEGSYGLVVSPSVQTLTILANDGIHGIVSFKEGSAETSETGRQNIVYIELRRAVGTLGSVSVDWKVSEMDGDEIPDVLPQSGTVAFGDGADRSYIGLLVVDDPIAEKDEVILIELTGAAGGAAVGWNASVFSLVIAANGEYRGIARFESATTIVTAEGSGIVQIPVRRDAGAFDTAAVGYSFTNGGAEKDRDYYDAGIGRIEFAEGVREANISVGIFDDHLLEGAESFTLTLYALPAQDVQEPEWYPIQLTDPSTVQVTILPSDDPGVTVSFATASIVVEENADTVSIPIVRSGVVDIPVDLWVRLSGGNGTAAPGDDYVFIDGHVTFGAGETTAYATVSIVDDAEPELPESFSVELTVLDPENTRVTLSVVTVTIAENDDAHGVVSFDDPALAVVGREGESVSLALVRAAGTFGPIQVTWAAIDSDGDGIADVSPSSGTVDFEDGQMIAHVLLLVVADDFPELMELAPIALNAVQGGGRVSDAHSVADVYIPATEDALGDIGFASDLLISTVDESSGVAVLRIERVGGIPCAIDIIVGTAGISANGEDDYAELKNHVVHFGASDAHAFVSVAILDDGVPELAESLEVVILSATFNQTVGFPGYPGNDPTLPVHIRLDEETATVVIAESDTPGGTVDFELSTVSIAEGGTVSVRLTRTGAALLPVTVTVSVAGGSALNGVDVQLPAAESDGSFLVFMSADQFEATFNVVAIDDDEPELGETLSLVLSSIVVPELSRRSSRAVAAANCLLGTNRALDINILESDSPHGIFRWAPQNQSSVVLEGDSVTLVVFRSAGTIGASTVTWSVMTVASLGDLAPSTGTIDFADGESEKSILLLVVSDGIPEGDDAVAVELLSASAGDISDNAADASATVLIPANDRAFGVVQFGHDSLSLRVTEELSDSVVLLTIVRSVSHIGAIRVHVVSGGNATDGDYQLPVGFVDLFDGVAEANVTLVVSADGVPEVDELITVVITGVELLDRDAVTMGIESPVVGADTDALILIPANDFDYGSVSFSVEKLSVSEGQTAGEIGLTIVRTGVTLFPASFQVVLVAGSAAGEDVVFSSGSLFTLAAGESSVAVPLSIVADGSPELEEQLSLAIKAVTDGLKVGGECLVIIAPSDHPGGLISVVDSSVPLVVPESGAGTNNSVARVTVQRGPGAYGILHVAWDATESDADNGLSDISPSSGTVVFLDGETTADILIEVLSDGAPELDESIVLRLTDVSESEGALIVRDASARTIDIPANDDVYGRFAMESASLSTSEGDAVSVSIRRSVSTVGAVIVTVALIDGTARFGDDFVLSRGGPTVQVMFADGDELAHFNVSIVKGDAPELEEHFSAVIQSLSFVDLTTPPAGTYAIDDPRECTVAIALHGLPHGTVDFAVTEFSVAEGDGPVGIVLVRTGSSLAAVTILVTVSGGTAVEGEDYTLSTKTVEFEDDQTTVTFSVEIIDDTVAEQAETILLEVGSEMAGVSVTLAVATIHINASDLPGVVGFTVSALNVSESGDPQQFQVVRSEGTTGDVTVVWTVTDAQGSLAVSDIFPSGGTIVLTDGTSHGFVELKALVDQLPEFTEAFLLTLTDASGGASIDSEAQSIEISVPANDDPYGVFDLSTDAITVGEDVGSVSIVIKRSGGSLGAVAVPIQVTSGTALPADDFTLPTDAVVLFGVGQTEGSIRIGIVNDQVPEGDESFTVSLGDPKAIDVAESVLFSPRIGNPVSLVVIVSENDDHRGVFEFAPENAVMSVVEEDTAGAGSKVQVRVIRKAGLFSAQ # PASA_UPDATE: g8205.t1, single gene model update, valid-1, status:[pasa:asmbl_7808,status:12], valid-1 NODE_501_length_22225_cov_42.3644 . gene 17704 19033 . - . ID=g8205;Name=g8205.t1 NODE_501_length_22225_cov_42.3644 . mRNA 17704 19033 . - . ID=g8205.t1;Parent=g8205;Name=g8205.t1 NODE_501_length_22225_cov_42.3644 . five_prime_UTR 18895 19033 . - . ID=g8205.t1.utr5p1;Parent=g8205.t1 NODE_501_length_22225_cov_42.3644 . exon 18784 19033 . - . ID=g8205.t1.exon1;Parent=g8205.t1 NODE_501_length_22225_cov_42.3644 . CDS 18784 18894 . - 0 ID=cds.g8205.t1;Parent=g8205.t1 NODE_501_length_22225_cov_42.3644 . exon 17704 18418 . - . ID=g8205.t1.exon2;Parent=g8205.t1 NODE_501_length_22225_cov_42.3644 . CDS 18239 18418 . - 0 ID=cds.g8205.t1;Parent=g8205.t1 NODE_501_length_22225_cov_42.3644 . three_prime_UTR 17704 18238 . - . ID=g8205.t1.utr3p1;Parent=g8205.t1 #PROT g8205.t1 g8205 MAHYGRIAFGLGACGGMLYGTHLAMQWITPTHEQLLSEMTPERRSRTLLAVDEERRKNTILFDVMKVAIESPDPVWKIPDARQPTAAPSTRAADSR* # ORIGINAL: g9215.t1 original gene structure, not modified by PASA NODE_3210_length_4009_cov_42.165 AUGUSTUS gene 115 3886 . + . ID=g9215;Name=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS mRNA 115 3886 . + . ID=g9215.t1;Parent=g9215;Name=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS exon 115 378 . + . ID=g9215.t1.exon1;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS CDS 115 378 . + 0 ID=cds.g9215.t1;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS exon 858 938 . + . ID=g9215.t1.exon2;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS CDS 858 938 . + 0 ID=cds.g9215.t1;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS exon 1129 1211 . + . ID=g9215.t1.exon3;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS CDS 1129 1211 . + 0 ID=cds.g9215.t1;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS exon 1450 3208 . + . ID=g9215.t1.exon4;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS CDS 1450 3208 . + 1 ID=cds.g9215.t1;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS exon 3713 3886 . + . ID=g9215.t1.exon5;Parent=g9215.t1 NODE_3210_length_4009_cov_42.165 AUGUSTUS CDS 3713 3886 . + 0 ID=cds.g9215.t1;Parent=g9215.t1 #PROT g9215.t1 g9215 SFGWDSVDSFMQHDVQEFSRVLIDNVEGKMKIGGQARVISALFEGRMKSFVRCINVSYESTRSESFYDVQLNVKGMRGVEESFKDYIQVERLDGENKYMAEGHGLQDADKGVVFESFPPVLHLQLKRFEYDINTGAMVKINDRYEFSERLELDAYLEKPEETPASYSLHAVLVHSGDVHGGHYVVYIRPRRDGDWFRFDDDRVTRAQPSEALDGNFGSDETRDRGSVGVGVGLGAGRMLSTSGGVRGLAQRLGRRFTNAYMLVYIRDCLVDDVLAEVTDADIPQQLRERFDAERAADEARKRDQLEQHLYTTVRVVTAEHMARHAEFDLVNFDAEDIRSYRIRRDSKFTDLRRSVAADLDVNEGSVRLWQFVRRQNKTSRPDAPLVNDAQSMATLVKESPMRLFAETPLVLPDGHTIDPPAVIDDNEMLIFIKFYEPERALMRYVGHIFVNPTRRIGDIQALVRRMASVSADAALAAYEEIKPDMIEPIDVGRTFRQSELQTGDILCFQLRDRAPGAADAPLATVPAYFAHVSNRIRVAFRSVQSPREDAFTLDLSKRMSYEELADRVGRQVGHDPAKLRFLQCDPVRESPRVPYKRIIPQTTLMDLLTSSGAYSSTHFLFYEALPVTLAEYETKRVLRVAVYNTRVEEEREISVLVPLAGTAADVLTAALDELRAAPHPVSTAANKSGTAAPAGSGLYRLMEVGHARINRVCKEDDAVDKLHGELRLEEVLAEERSMHEGDRIVEVRHFHKDSIHAHGSPFLMLFGKVCFSVVMVVECLSRVCML* # ORIGINAL: g3440.t1 original gene structure, not modified by PASA NODE_630_length_19942_cov_41.7729 AUGUSTUS gene 14685 18650 . - . ID=g3440;Name=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS mRNA 14685 18650 . - . ID=g3440.t1;Parent=g3440;Name=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 18426 18650 . - . ID=g3440.t1.exon1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 18426 18650 . - 0 ID=cds.g3440.t1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 18257 18313 . - . ID=g3440.t1.exon2;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 18257 18313 . - 0 ID=cds.g3440.t1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 17451 18170 . - . ID=g3440.t1.exon3;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 17451 18170 . - 0 ID=cds.g3440.t1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 17071 17246 . - . ID=g3440.t1.exon4;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 17071 17246 . - 0 ID=cds.g3440.t1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 16572 16822 . - . ID=g3440.t1.exon5;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 16572 16822 . - 1 ID=cds.g3440.t1;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 14685 16390 . - . ID=g3440.t1.exon6;Parent=g3440.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 14685 16390 . - 2 ID=cds.g3440.t1;Parent=g3440.t1 #PROT g3440.t1 g3440 MGPKSARESRSGGAPAAARGKRGAGRVAQAAAGGAGARGAAPARKNHQTSRRLAKRSLNVYSAEDDKENPNVADRFKDVDIYEYELPEEFEDEEIDEDTAFGEDSDSDNEGPVGDLMEGLDAGEGVDADSGSDDNGDNGDKDDNGDDDGRHDRLLSAIASMDGVRRRKRKLAERSEAYRESEFNLNPVIDGGADGPIGVDDLVASLGGDDAAGYGSLKKKLARLDRDAAPLSTPLAKPAAARIERAVAYEATSKEVSKWVPTVKANREAEHLSFPLNTPIAGPNLTSVSLAASFKPETQMESEVHALLAAASGGKGDVEKQLLEAEQLALNELTVEEARERRKQLQKMRSVLSYYEEKCRRINRIKSKKYHRVKNRAVKRKEALREGDIPLENASVSKAERARVEERMTLRHKNKSKWAKRMLARGGGVDAGTREAIAEQLRIGDELRRKITLEGSDDEDQGGSEGEDSGDDEEEDVEPVTDSENEEEDGGVSAQRKAGKKTDGERLDALASDLDAKLPAKGLFGLKFMQRAIDKKRAEARQMLSELRDELGVATPGEGELVTPGHVRVVVEESGADVVSEAERSGASSKNRKTHARALVGVPARDENRRVGKNVAQSDDDSDTSAGVDSNMKDDFSRLHRQASESKKTQTGRKVFGKAAVAAPPTHQRADDGEDQGGDDDEAAGAGGRRAHVTQLRDAVRVDFTQTAGHSRPASAATAQQQSDTLPLGGKSALVFDMDDSDDGDDGDDGNGVDSDVDSGAGGRIVDEADGAPRSTRSRDDGEGIDEDANPWVLPIAGANSDKSGNKETGGSRRKRKADDDVMAAASTAHAHSEADTEAVSGKLGGSANESVRSADRPVKRVRIAGTEGAEATDAGLPPPPHAKAARVRDTGIDLARDGAQRQLIKMAFAGDDVVREFEDEKRALVDKETPKDEDMTLPGWGAWGGDGAPVPKRRFVKPAAPREPRRDDSLKHVIINEKLDKKAARLQVARVPHPFNSADQFERAMRNPLGKEWNTNASFKKAVMPKVSTKAGTIIEPIRTMKK* # PASA_UPDATE: g3439.t1, single gene model update, valid-1, status:[pasa:asmbl_8578,status:12], valid-1 NODE_630_length_19942_cov_41.7729 . gene 12966 14479 . + . ID=g3439;Name=g3439.t1 NODE_630_length_19942_cov_41.7729 . mRNA 12966 14479 . + . ID=g3439.t1;Parent=g3439;Name=g3439.t1 NODE_630_length_19942_cov_41.7729 . five_prime_UTR 12966 13016 . + . ID=g3439.t1.utr5p1;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . exon 12966 13492 . + . ID=g3439.t1.exon1;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . CDS 13017 13492 . + 0 ID=cds.g3439.t1;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . exon 13630 13713 . + . ID=g3439.t1.exon2;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . CDS 13630 13713 . + 1 ID=cds.g3439.t1;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . exon 14254 14479 . + . ID=g3439.t1.exon3;Parent=g3439.t1 NODE_630_length_19942_cov_41.7729 . CDS 14254 14479 . + 1 ID=cds.g3439.t1;Parent=g3439.t1 #PROT g3439.t1 g3439 MGEAMAAKTGDAGSSLAGGCPVPHDERKVPRAAPSPQASAGGLAGAGGCTAGLETATASLSAPPDAINPLNNMPPPNQRPAPGQKYSLPTDRVVSSIPKGGSESEEKWVFPSEQMFYNAMRRKAWNPNEDDMSTVVSIHNAVNERAWGEVLKWEKMHEGSCPAPKLLRFRGRPQDFSPKARLRSWFGYTLPFDRHDWVVDRCGTEVTYVIDFYQARGTPDKPLGFYLDCRPAVSVYGVIDRFRMAVRNVLHTDAKTTPPSP* # PASA_UPDATE: g3435.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8579,status:12], valid-1 # PASA_UPDATE: g3435.t1, single gene model update, valid-1, status:[pasa:asmbl_8580,status:12], valid-1 NODE_630_length_19942_cov_41.7729 . gene 866 2083 . - . ID=g3435;Name=g3435.t1 NODE_630_length_19942_cov_41.7729 . mRNA 866 2083 . - . ID=g3435.t1.1.5b6be70c;Parent=g3435;Name=g3435.t1 NODE_630_length_19942_cov_41.7729 . five_prime_UTR 2073 2083 . - . ID=g3435.t1.1.5b6be70c.utr5p1;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . exon 2029 2083 . - . ID=g3435.t1.1.5b6be70c.exon1;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . CDS 2029 2072 . - 0 ID=cds.g3435.t1.1.5b6be70c;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . exon 1653 1743 . - . ID=g3435.t1.1.5b6be70c.exon2;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . CDS 1653 1743 . - 1 ID=cds.g3435.t1.1.5b6be70c;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . exon 1455 1521 . - . ID=g3435.t1.1.5b6be70c.exon3;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . CDS 1455 1521 . - 0 ID=cds.g3435.t1.1.5b6be70c;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . exon 866 1275 . - . ID=g3435.t1.1.5b6be70c.exon4;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . CDS 980 1275 . - 2 ID=cds.g3435.t1.1.5b6be70c;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . three_prime_UTR 866 979 . - . ID=g3435.t1.1.5b6be70c.utr3p1;Parent=g3435.t1.1.5b6be70c NODE_630_length_19942_cov_41.7729 . mRNA 866 1814 . - . ID=g3435.t1;Parent=g3435;Name=g3435.t1 NODE_630_length_19942_cov_41.7729 . five_prime_UTR 1737 1814 . - . ID=g3435.t1.utr5p1;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . exon 1653 1814 . - . ID=g3435.t1.exon1;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . CDS 1653 1736 . - 0 ID=cds.g3435.t1;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . exon 1455 1521 . - . ID=g3435.t1.exon2;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . CDS 1455 1521 . - 0 ID=cds.g3435.t1;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . exon 866 1275 . - . ID=g3435.t1.exon3;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . CDS 980 1275 . - 2 ID=cds.g3435.t1;Parent=g3435.t1 NODE_630_length_19942_cov_41.7729 . three_prime_UTR 866 979 . - . ID=g3435.t1.utr3p1;Parent=g3435.t1 #PROT g3435.t1.1.5b6be70c g3435 MFGSFGAIAEISLVLYFMTASVIGLYSTAVSGSLRPIPQHTSLHQIIINCMILLVLSSSLPVLSRVLGITNFDLMGNFGDFAWLGNPHVMLVYNAAFLVSAALCFLSLLRSLNLLSRAPAPHPRRPDEDDEVGDELAALGEQSELNGSFEGRSLHAQLAQAKSSS* #PROT g3435.t1 g3435 MTASVIGLYSTAVSGSLRPIPQHTSLHQIIINCMILLVLSSSLPVLSRVLGITNFDLMGNFGDFAWLGNPHVMLVYNAAFLVSAALCFLSLLRSLNLLSRAPAPHPRRPDEDDEVGDELAALGEQSELNGSFEGRSLHAQLAQAKSSS* # ORIGINAL: g3437.t1 original gene structure, not modified by PASA NODE_630_length_19942_cov_41.7729 AUGUSTUS gene 6151 10441 . + . ID=g3437;Name=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS mRNA 6151 10441 . + . ID=g3437.t1;Parent=g3437;Name=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 6151 6452 . + . ID=g3437.t1.exon1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 6151 6452 . + 0 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 6590 8033 . + . ID=g3437.t1.exon2;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 6590 8033 . + 1 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 8245 8834 . + . ID=g3437.t1.exon3;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 8245 8834 . + 0 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 9124 9409 . + . ID=g3437.t1.exon4;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 9124 9409 . + 1 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 9577 9676 . + . ID=g3437.t1.exon5;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 9577 9676 . + 0 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 9883 10066 . + . ID=g3437.t1.exon6;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 9883 10066 . + 2 ID=cds.g3437.t1;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 10204 10441 . + . ID=g3437.t1.exon7;Parent=g3437.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 10204 10441 . + 1 ID=cds.g3437.t1;Parent=g3437.t1 #PROT g3437.t1 g3437 MWAANSSSNTAVAPTRHRQDAAHGTTSSFIDLRAPAPKSSLGPMLQTVENDGLVVGKEFRLQSYPSLKFAKECLPPTFKEVRETKKGSLYVTPVDPHKGPDAYDRLRTIHSKLRAAADAEARMTALPAGIATAGEIVERNAASEQSYIQQQLETKRQQAELAALAQEVYGHQGGASGASALSNPNAALMIGVHRLHLEEITPPRRLEESTRAILSTIVDQIEASTVPFLTRRPGLQNHIRSSLQEKINPARIFLKTMTGNAQTKDMHAAASHGGPGAADDDQQSVGNGGDDSAPTDGGPTPRAVSRASNGRASSPSHGAIDGGGAMRRYTDGGGVDRSGRDSRADDGGPRSSPPRLHADFKGHACVLTETFPRSPHVFDPLSKPHADGTMSPSGHGGSGALGFGRHPGRKGVADAADEEPVRDGWFARMLEIAGKRKTDTGSADDDGPRRVREPIVRRTIGMSRRWKEYPMPPKEKDIMMSAFALDEPRSVSLSSISGANSMHVTPGGPGRVPSDVMAAAAGHESASTLSDSAATNPNPAGRHVAIASGSEIAVYAGRASRRGSMFDDASSVIGSRLHSRQGSQSDLFSGRRRRSEACSPTIDSPTFAPLLPAYPTVDVLVNALTSIHERERLEALEACPTLESGIGRNNPPILNALSLSLSQDNSFRVRLGAAKALCSLGCGRQEDVLDVLRHALLFGKEIDRWTATECLAQCGIADADVLKSLYAELNSPRQRRVIARNLLCTLVLGNPVIEADLARIATQGEQAYARTEAINVLASIHTPQPESLAAIVSAYWNDRNQGIRTLALDVLTSRGHGQLLLRSLKDRMLSPEASERLSALERLEAMGHVPAQIVETYARMFKDPYVNIRTEIVQMTSRMRCKDPLIVFALTEATVDISVKVRIAALQCLAHIRARNEEVKKAFIWALRFETDPDAFSHAYAMGETLGYLDQDATEALTDRLATAEGMMRERTIAMLETLNVPMAVQQSETIQDDVILAVRKLATKERVLDGMSRKERMEKAEEADRARRLRRKSLGCDPDELMGACM* # ORIGINAL: g3438.t1 original gene structure, not modified by PASA NODE_630_length_19942_cov_41.7729 AUGUSTUS gene 10844 12436 . - . ID=g3438;Name=g3438.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS mRNA 10844 12436 . - . ID=g3438.t1;Parent=g3438;Name=g3438.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS exon 10844 12436 . - . ID=g3438.t1.exon1;Parent=g3438.t1 NODE_630_length_19942_cov_41.7729 AUGUSTUS CDS 10844 12436 . - 0 ID=cds.g3438.t1;Parent=g3438.t1 #PROT g3438.t1 g3438 MFGGMMFDPFSERSLGGAPAYGYTQRRPVRAPPREQYVVVEDEYGRPVRVPLSALRAAQSRNAPAPSRSAYYDHYDPRQDYAGRPVERVHAVDSEDDDENDRSLYYEDPRIARQRALAEQKRLVREQQLREQRQREIEAEEMRRVALEERRRQQELRAQQQLQRQLEQQWHAQPQAQQTHVRQPNACSVSVGGRQGHGPVVIPVMTREKQMQAEAVRRAEAEQRALARRVESLRVLVAARRIQRWFRAQRARRAITVIVRAIRCHTAVTAARRATTSLRKLRQIKHLAADISSEYNNSIPAARDAVSEAQRTGDEQAVQASQKARDKLVRAHNERLLQVLLKIDELSTAGSDFVREQRKAAVNMIEGLIRQAELRASERCQTEEKHNDATRADVEMADADDTEGARTAEEDKMQADVKQDDASAQTGSCTTDESVSAEPSSLAEGVSRLISAGDAASVSAENDVNSRSDGDIAVDGEPHADGVEATVIASCDEQGHVVSAPLAEDGTSGDVVEIQGPGSPTESSEWHIVE* # PASA_UPDATE: g3436.t1, single gene model update, valid-1, status:[pasa:asmbl_8581,status:12], valid-1 NODE_630_length_19942_cov_41.7729 . gene 3120 5652 . - . ID=g3436;Name=g3436.t1 NODE_630_length_19942_cov_41.7729 . mRNA 3120 5652 . - . ID=g3436.t1;Parent=g3436;Name=g3436.t1 NODE_630_length_19942_cov_41.7729 . five_prime_UTR 5518 5652 . - . ID=g3436.t1.utr5p1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 5458 5652 . - . ID=g3436.t1.exon1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 5458 5517 . - 0 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 5203 5299 . - . ID=g3436.t1.exon2;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 5203 5299 . - 0 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 4988 5018 . - . ID=g3436.t1.exon3;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 4988 5018 . - 2 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 4599 4738 . - . ID=g3436.t1.exon4;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 4599 4738 . - 1 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 4229 4329 . - . ID=g3436.t1.exon5;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 4229 4329 . - 2 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 3877 3940 . - . ID=g3436.t1.exon6;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 3877 3940 . - 0 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 3605 3715 . - . ID=g3436.t1.exon7;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 3605 3715 . - 2 ID=cds.g3436.t1;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . exon 3120 3313 . - . ID=g3436.t1.exon8;Parent=g3436.t1 NODE_630_length_19942_cov_41.7729 . CDS 3120 3313 . - 2 ID=cds.g3436.t1;Parent=g3436.t1 #PROT g3436.t1 g3436 MEDELHPEESAFYETVRQYVIFGIFLLSLYSMCLFIVSRFRKRHNTTDRHFPDEEEDFAYSISLWLCTFTLSISLASVLLLPITIASNEILLLYPGSVYMEWLNERLIHGFWNHIFVCSNASLFVFLPFAHFFTESEGIGRKRGLLGRFYEASLILLLVGLGLAGFTFVARAVVMPTVSDALSYLPFLYSTISLIGALVCLVCTPLGCVRMFSLGKVLVPMPGIAIDDALARLAMEADHLNRLIAGVFRVVAFLFGLCQRCDVVS* # PASA_UPDATE: g8485.t1, single gene model update, valid-1, status:[pasa:asmbl_3749,status:12], valid-1 NODE_2201_length_7297_cov_64.5461 . gene 83 4770 . - . ID=g8485;Name=g8485.t1 NODE_2201_length_7297_cov_64.5461 . mRNA 83 4770 . - . ID=g8485.t1;Parent=g8485;Name=g8485.t1 NODE_2201_length_7297_cov_64.5461 . five_prime_UTR 4622 4770 . - . ID=g8485.t1.utr5p1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 4586 4770 . - . ID=g8485.t1.exon1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 4586 4621 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 4286 4360 . - . ID=g8485.t1.exon2;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 4286 4360 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 3569 3934 . - . ID=g8485.t1.exon3;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 3569 3934 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 3025 3222 . - . ID=g8485.t1.exon4;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 3025 3222 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 2540 2659 . - . ID=g8485.t1.exon5;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 2540 2659 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 1980 2288 . - . ID=g8485.t1.exon6;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 1980 2288 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 1766 1837 . - . ID=g8485.t1.exon7;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 1766 1837 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 1336 1430 . - . ID=g8485.t1.exon8;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 1336 1430 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 846 939 . - . ID=g8485.t1.exon9;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 846 939 . - 1 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 432 512 . - . ID=g8485.t1.exon10;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 432 512 . - 0 ID=cds.g8485.t1;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . exon 83 253 . - . ID=g8485.t1.exon11;Parent=g8485.t1 NODE_2201_length_7297_cov_64.5461 . CDS 83 253 . - 0 ID=cds.g8485.t1;Parent=g8485.t1;3_prime_partial=true #PROT g8485.t1 g8485 MSSTWIEYKTDAGIPYYYNVTSKETVWVKPADLGGPKASNESIYGNAGTQPAASMYQSPRGSTAETYATPSHLAQATYQVPPSQTPPKSLYQSPSADTAQYQIPPAKPLPMYQSPSGDATQYQTPVGGGGPASPKSFPFGRKSIYGRSSASTEGSSENRMSRSVSENNLYDAVSAGKRGSIATSGRITHGTIFNAIQVLVDDKLMRIAVRRTETIRDFTQLVEAQYSVSYPTEAPLSIQALVDENESVVPLSDLASGIRAFSTLTVVRGDPNAAVAATTDADMGEGEKRKLRVITVAGDVKTLMVDDTAPVKSVMAQIVGKLGLVRHSEFWLCTYRQDKSDMAANLKRRKSTVRSSMIQRKPSLGSITGPTPEPKEQKKKDDDEEEPPMEREVWLNPDETLNAQGIRGNDVVYLRRRFFFLDDSAYLPDPVALQLVYAQAREAILNMEHPELTQRDAISFAALQCQVSMGDADRSLGEISDKVVTEVLPAEFQKVKKIDKLVAEDYNKLRGINTNNAMYHYVRKYATIPSYGITKFNAL # PASA_UPDATE: g8486.t1, single gene model update, valid-1, status:[pasa:asmbl_3750,status:12], valid-1 NODE_2201_length_7297_cov_64.5461 . gene 5317 7218 . + . ID=g8486;Name=g8486.t1 NODE_2201_length_7297_cov_64.5461 . mRNA 5317 7218 . + . ID=g8486.t1;Parent=g8486;Name=g8486.t1 NODE_2201_length_7297_cov_64.5461 . five_prime_UTR 5317 5472 . + . ID=g8486.t1.utr5p1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 5317 5571 . + . ID=g8486.t1.exon1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 5473 5571 . + 0 ID=cds.g8486.t1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 5724 5794 . + . ID=g8486.t1.exon2;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 5724 5794 . + 0 ID=cds.g8486.t1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 6015 6159 . + . ID=g8486.t1.exon3;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 6015 6159 . + 1 ID=cds.g8486.t1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 6650 6763 . + . ID=g8486.t1.exon4;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 6650 6763 . + 0 ID=cds.g8486.t1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 6911 7031 . + . ID=g8486.t1.exon5;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 6911 7031 . + 0 ID=cds.g8486.t1;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . exon 7151 7218 . + . ID=g8486.t1.exon6;Parent=g8486.t1 NODE_2201_length_7297_cov_64.5461 . CDS 7151 7218 . + 2 ID=cds.g8486.t1;Parent=g8486.t1 #PROT g8486.t1 g8486 MSAKTGLVQVWKNGKNPSKPRLLSVDASGARLYKDEARMRDRKVYVEMSLCTFAYGKEYFSGTNDKGTFFRMSSKSDSETEEWRGYLRALCRSFIAEFKAMHKFTIYQCGYVLLSDNRELNSERMFMTVENERVCFYKSHTDALKRGKAYKSYLLPECRMKWLPSVYEFAPANGDGKIFSANIGLGGYNFVLEHAIPMLRGECNL* # ORIGINAL: g12594.t1 original gene structure, not modified by PASA NODE_1012_length_14727_cov_39.223 AUGUSTUS gene 1253 2422 . + . ID=g12594;Name=g12594.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS mRNA 1253 2422 . + . ID=g12594.t1;Parent=g12594;Name=g12594.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 1253 2422 . + . ID=g12594.t1.exon1;Parent=g12594.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 1253 2422 . + 0 ID=cds.g12594.t1;Parent=g12594.t1 #PROT g12594.t1 g12594 MSTMSLVLHRSAHFILHGAPKVVDVSALGRIHTLDLSGCDGVGDVSGLAGVHSLRLSGCKVPRNYSVLGRIHTLDLSRSHVSDVSGLGQVHTLNISFCELISNVSALGTVHTLTLSGCNRVRDVSYLGGVHNLDLSGCNGVSDVSALGHVHSLNLSQCRRVANVSALGCVHTLILCGCTSLENVSALGSVHTLDLSKCASVADVSDLGGVHSLTLAHCRRIEDVSPLKDVKYLDLSFCEGVSDVSALGTVHTLKLTACYHVTDVSALGGVHTLDLRMCGGLDVSSLGTVHSLDVTGCHDLTGLGSVEASLLLHKGRRVCFESSGTLTEMPLSLALVALTSFVFVAGVGLTLFLSVSRACISEGIVVFGRRGTCICVVVALLALSVMGND* # ORIGINAL: g12596.t1 original gene structure, not modified by PASA NODE_1012_length_14727_cov_39.223 AUGUSTUS gene 11616 13108 . + . ID=g12596;Name=g12596.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS mRNA 11616 13108 . + . ID=g12596.t1;Parent=g12596;Name=g12596.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 11616 12469 . + . ID=g12596.t1.exon1;Parent=g12596.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 11616 12469 . + 0 ID=cds.g12596.t1;Parent=g12596.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 12694 13108 . + . ID=g12596.t1.exon2;Parent=g12596.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 12694 13108 . + 1 ID=cds.g12596.t1;Parent=g12596.t1 #PROT g12596.t1 g12596 MNTLLSGDANGRALLDGSFVTEFHAEPYSAAAGASCTKGPNALRRTQSMHPTGGMHTTDGNDSEPQAQFGLPSTIGSGALSGTRPHSRRRGDRDILLTSDCDGAGEFASTSHVRLTAASVPDGATTTGAAATVSGILLHSRRQRTLGVGPCTMPACSDEHNGITSNHPGYRDTAASSVGTGHRNGGVASARLTSTTSPPRSMLMQRASAKESHRLHPCSSATSTEASRSDEERRLDAIMTAARGSDNVFVKNAMTRRDYVRRMSTIERLGSDLMAKREEDLCNVKKSLAKLESYRRPSVLPLLDSHQAAIEAHLHSITHGKTPTSPAAVHASVGGPVQTHTSIVHPHVLAAHVHDAIFPIAPTSTPSAGRRRSKSVGAATASAAATVRRTTSATGDAYDTDGDGDSSRRQRVTFSRPDADGY* # PASA_UPDATE: g12597.t1, single gene model update, valid-1, status:[pasa:asmbl_44,status:12], valid-1 NODE_1012_length_14727_cov_39.223 . gene 13585 14644 . + . ID=g12597;Name=g12597.t1 NODE_1012_length_14727_cov_39.223 . mRNA 13585 14644 . + . ID=g12597.t1;Parent=g12597;Name=g12597.t1 NODE_1012_length_14727_cov_39.223 . exon 13585 13701 . + . ID=g12597.t1.exon1;Parent=g12597.t1 NODE_1012_length_14727_cov_39.223 . CDS 13585 13701 . + 0 ID=cds.g12597.t1;Parent=g12597.t1 NODE_1012_length_14727_cov_39.223 . exon 13888 14041 . + . ID=g12597.t1.exon2;Parent=g12597.t1 NODE_1012_length_14727_cov_39.223 . CDS 13888 14041 . + 0 ID=cds.g12597.t1;Parent=g12597.t1 NODE_1012_length_14727_cov_39.223 . exon 14369 14644 . + . ID=g12597.t1.exon3;Parent=g12597.t1 NODE_1012_length_14727_cov_39.223 . CDS 14369 14644 . + 2 ID=cds.g12597.t1;Parent=g12597.t1;3_prime_partial=true #PROT g12597.t1 g12597 MATFKVDIPDRESFKKTIIEELIAVGSETDADGWHRVQERDGVRISKKKTDESKIHIVKGEGDIDASIPEVLAMIWNIEGRKDWDELYMDGKVLEQYDDTSSTVYQQYKTPGPASNRDFVFFRVRETLPDGTVVVAGKSVKHPDMPKSSDFTRAKILSSGTVLRKTADGKTSVVYAVQLDPC # ORIGINAL: g12595.t1 original gene structure, not modified by PASA NODE_1012_length_14727_cov_39.223 AUGUSTUS gene 4187 5967 . - . ID=g12595;Name=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS mRNA 4187 5967 . - . ID=g12595.t1;Parent=g12595;Name=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 5818 5967 . - . ID=g12595.t1.exon1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 5818 5967 . - 0 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 5525 5660 . - . ID=g12595.t1.exon2;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 5525 5660 . - 0 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 5256 5386 . - . ID=g12595.t1.exon3;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 5256 5386 . - 2 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 4961 5130 . - . ID=g12595.t1.exon4;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 4961 5130 . - 0 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 4740 4887 . - . ID=g12595.t1.exon5;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 4740 4887 . - 1 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 4502 4600 . - . ID=g12595.t1.exon6;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 4502 4600 . - 0 ID=cds.g12595.t1;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS exon 4187 4372 . - . ID=g12595.t1.exon7;Parent=g12595.t1 NODE_1012_length_14727_cov_39.223 AUGUSTUS CDS 4187 4372 . - 0 ID=cds.g12595.t1;Parent=g12595.t1 #PROT g12595.t1 g12595 MSLYSSLESDIEDLQGSLAASKIRERHAALNASFGTAVSWRSLLCIGSVKTDAPNGDVYGQTCSGMPSLEDWRWANHVIDSRGFGIQVTETRMDVGLVPLADLFNAASRTALANCRCRSDFARQEVRCYTTRKVAAGSELLMTYAHSHSNVHYLLQYGFAFPSTSDYEVIHIFPPAMGGSADDPRNGVLNSCKLNSVYRRHGYIANATAVEPALLAYLRVLHTTRPSGVASMTNGLSTLEMCRRLESNVIVPFRDEQPLRHILSLIANSLRNYPTSIEYDMQQLNNIPASDDSVSAINKRNSLRLRVSEKTVLQSLLRAPAPYGLTIGPHFACRLSFEL* # ORIGINAL: g2823.t1 original gene structure, not modified by PASA NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS gene 45 1466 . + . ID=g2823;Name=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS mRNA 45 1466 . + . ID=g2823.t1;Parent=g2823;Name=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS exon 45 191 . + . ID=g2823.t1.exon1;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS CDS 45 191 . + 2 ID=cds.g2823.t1;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS exon 632 724 . + . ID=g2823.t1.exon2;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS CDS 632 724 . + 2 ID=cds.g2823.t1;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS exon 892 935 . + . ID=g2823.t1.exon3;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS CDS 892 935 . + 2 ID=cds.g2823.t1;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS exon 1269 1466 . + . ID=g2823.t1.exon4;Parent=g2823.t1 NODE_4435_length_1623_cov_21.8217_potentialcontaminant AUGUSTUS CDS 1269 1466 . + 0 ID=cds.g2823.t1;Parent=g2823.t1 #PROT g2823.t1 g2823 YHVNIWDEGPDSDSNIVFEKETDADGYRPVLAASFNKLVERMTDGKNVDVKFVKTFVLTYQSFTTPEKLLEKLTERYPLCAKLLEFYSQQRNIQIRVYNAMKMWLELSPELEGNDALCETFFKFIRETLLIEHPKLAKQLRTYCIRAKQVGEIEPKGGV* # ORIGINAL: g13655.t1 original gene structure, not modified by PASA NODE_2268_length_6968_cov_37.741 AUGUSTUS gene 76 2417 . + . ID=g13655;Name=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS mRNA 76 2417 . + . ID=g13655.t1;Parent=g13655;Name=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 76 178 . + . ID=g13655.t1.exon1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 76 178 . + 0 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 352 582 . + . ID=g13655.t1.exon2;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 352 582 . + 2 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 897 995 . + . ID=g13655.t1.exon3;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 897 995 . + 2 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 1199 1359 . + . ID=g13655.t1.exon4;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 1199 1359 . + 2 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 1603 1695 . + . ID=g13655.t1.exon5;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 1603 1695 . + 0 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 1910 1977 . + . ID=g13655.t1.exon6;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 1910 1977 . + 0 ID=cds.g13655.t1;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS exon 2285 2417 . + . ID=g13655.t1.exon7;Parent=g13655.t1 NODE_2268_length_6968_cov_37.741 AUGUSTUS CDS 2285 2417 . + 1 ID=cds.g13655.t1;Parent=g13655.t1 #PROT g13655.t1 g13655 KPGSVWVHLIAGTTAGLAATVCLHPLDLVKIRFQVNETEGGRHGTLRALRTIARTEGVSALYRGVVANLWGSGLSWGLYFFGYNVMKKELRALTGDAPLGPGHHLAAASVAGVSTLVITNPIWVVKTRMCTQSASGGESYRGFVDGMWRLARNEGLRGMYKGLVPGLFGVSHGAIQFVAYEELRSFRVQHWQAADNKLNSAEYIVIAALSKMLAAVTTYPYQVVRSRLQRQPSIDPSTGYRSASQLVSGIWKNEGLRGYYKGLGPNLLRVTPATCITFVVYEHVSGFLQEQSFFR* # PASA_UPDATE: g13656.t1, single gene model update, valid-1, status:[pasa:asmbl_3898,status:12], valid-1 NODE_2268_length_6968_cov_37.741 . gene 2624 6849 . - . ID=g13656;Name=g13656.t1 NODE_2268_length_6968_cov_37.741 . mRNA 2624 6849 . - . ID=g13656.t1;Parent=g13656;Name=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 6805 6849 . - . ID=g13656.t1.exon1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 6805 6849 . - 0 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 6187 6380 . - . ID=g13656.t1.exon2;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 6187 6380 . - 0 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 5931 6007 . - . ID=g13656.t1.exon3;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 5931 6007 . - 1 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 5620 5687 . - . ID=g13656.t1.exon4;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 5620 5687 . - 2 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 4848 5196 . - . ID=g13656.t1.exon5;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 4848 5196 . - 0 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 4462 4643 . - . ID=g13656.t1.exon6;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 4462 4643 . - 2 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 3847 4004 . - . ID=g13656.t1.exon7;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 3847 4004 . - 0 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 3535 3632 . - . ID=g13656.t1.exon8;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 3535 3632 . - 1 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 3200 3272 . - . ID=g13656.t1.exon9;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 3200 3272 . - 2 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . exon 2624 3000 . - . ID=g13656.t1.exon10;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . CDS 2685 3000 . - 1 ID=cds.g13656.t1;Parent=g13656.t1 NODE_2268_length_6968_cov_37.741 . three_prime_UTR 2624 2684 . - . ID=g13656.t1.utr3p1;Parent=g13656.t1 #PROT g13656.t1 g13656 MAITHNLPIHKWYYEATSVWTLDYPPFFAWFEWCLSQFAALVDPDMVVIAADHVPAYSTVVFQRATVMASDLVLLWAMHRYTDGSRDRVLRGFLVLFNAGLFMVDHIHFQYNGVLFGLMIWSLAELRRRGIARPDSVVPGGISGDLVFFLRRFSSVRFLSLGMAVLCVFAASFAPFVVAASLSSTGTGSHVDGHVEGVSSGSAAGAIVAQIASRLFPFKRGLCHAYWAPNFWALYTAADKVLAKLGMFSVVSGNLLSDSRITAVLGKGGSLASMTGGLVGDSDGHVVLPRVPPVATFALTLVAMLPALVALWRLPVGQGGNRAGDVLVRAVTCCGFASFLFGWHVHEKAILMAILPLGLLAASDSAAARSFVVASLAGQFALFPLFFRPTETPAKILLLALYTIISYYGIASALRRNMAAPVALRTRSAHGLSGGVGLTAIEGVYLAGFVPLGAYTGAIHTLVFGEGLPFLPLMLTSCYCAVGIAYAYLLCAIGTLNASRSAATQEQPHDEHDAWRKAL* # PASA_UPDATE: g7637.t1, single gene model update, valid-1, status:[pasa:asmbl_5965,status:12], valid-1 NODE_3384_length_3577_cov_39.432 . gene 100 2331 . - . ID=g7637;Name=g7637.t1 NODE_3384_length_3577_cov_39.432 . mRNA 100 2331 . - . ID=g7637.t1;Parent=g7637;Name=g7637.t1 NODE_3384_length_3577_cov_39.432 . five_prime_UTR 2270 2331 . - . ID=g7637.t1.utr5p1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . exon 1660 2331 . - . ID=g7637.t1.exon1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . CDS 1660 2269 . - 0 ID=cds.g7637.t1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . exon 1296 1371 . - . ID=g7637.t1.exon2;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . CDS 1296 1371 . - 2 ID=cds.g7637.t1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . exon 891 1003 . - . ID=g7637.t1.exon3;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . CDS 891 1003 . - 1 ID=cds.g7637.t1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . exon 389 474 . - . ID=g7637.t1.exon4;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . CDS 389 474 . - 2 ID=cds.g7637.t1;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . exon 100 183 . - . ID=g7637.t1.exon5;Parent=g7637.t1 NODE_3384_length_3577_cov_39.432 . CDS 100 183 . - 0 ID=cds.g7637.t1;Parent=g7637.t1;3_prime_partial=true #PROT g7637.t1 g7637 MSKRSAAQTAAEAAQKRAVNHTRISDSKGVEDSYDLGPVLGKGSFGVVEVAIHKKTGEKWACKSLDKQKAGSSAVRQLEREVGILKRVAHKHVVQLREVLEAPKKIYLIMELCDGGDLLTCVEDRRYLPERDVAVIMKRLADVIAYLHDNEIVHRDLKLENILLSRADPADNFNIKVSDFGLSYIKGKESAMMSTMCGTPIYMAPEVIAKLGYSQQCDIWSMGIIMYFLLCGSPPFYDKDEEQLYEKINRGEVSFDGPVWASISSQAKNLIQGMLKVDPAHRFTAKEIMDHAWISNRDNAEGTPLASNVLDMMRAYNAERRFK # PASA_UPDATE: g11765.t1, single gene model update, valid-1, status:[pasa:asmbl_5739,status:12], valid-1 NODE_3222_length_3970_cov_47.8298 . gene 1 1399 . - . ID=g11765;Name=g11765.t1 NODE_3222_length_3970_cov_47.8298 . mRNA 1 1399 . - . ID=g11765.t1;Parent=g11765;Name=g11765.t1 NODE_3222_length_3970_cov_47.8298 . five_prime_UTR 1110 1399 . - . ID=g11765.t1.utr5p1;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . exon 643 1399 . - . ID=g11765.t1.exon1;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . CDS 643 1109 . - 0 ID=cds.g11765.t1;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . exon 456 538 . - . ID=g11765.t1.exon2;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . CDS 456 538 . - 1 ID=cds.g11765.t1;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . exon 1 48 . - . ID=g11765.t1.exon3;Parent=g11765.t1 NODE_3222_length_3970_cov_47.8298 . CDS 1 48 . - 2 ID=cds.g11765.t1;Parent=g11765.t1;3_prime_partial=true #PROT g11765.t1 g11765 MELRHRNLALVGPPAQIDSTDGRHREDSAAWEPPASDTERRPRPLFDTDDAVFFRGRGRILEALFRTPRNRRIFVALIFLVLGIATRFHRISDPHQVVFDEVHFGGFASKYIQRSYFFDVHPPLGKLLIALPAYLRGYDGSFTFKDIGLDYNRAHVDVPYTAMRGMPALLNALVVPLAFLTMMEWGFSMSGSVVAGVLV # PASA_UPDATE: g11766.t1, single gene model update, valid-1, status:[pasa:asmbl_5738,status:12],[pasa:asmbl_5740,status:12], valid-1 NODE_3222_length_3970_cov_47.8298 . gene 1780 3856 . - . ID=g11766;Name=g11766.t1 NODE_3222_length_3970_cov_47.8298 . mRNA 1780 3856 . - . ID=g11766.t1;Parent=g11766;Name=g11766.t1 NODE_3222_length_3970_cov_47.8298 . five_prime_UTR 3789 3856 . - . ID=g11766.t1.utr5p1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . exon 3714 3856 . - . ID=g11766.t1.exon1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . CDS 3714 3788 . - 0 ID=cds.g11766.t1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . exon 2963 3518 . - . ID=g11766.t1.exon2;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . CDS 2963 3518 . - 0 ID=cds.g11766.t1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . exon 2463 2786 . - . ID=g11766.t1.exon3;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . CDS 2463 2786 . - 2 ID=cds.g11766.t1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . exon 1780 2277 . - . ID=g11766.t1.exon4;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . CDS 1955 2277 . - 2 ID=cds.g11766.t1;Parent=g11766.t1 NODE_3222_length_3970_cov_47.8298 . three_prime_UTR 1780 1954 . - . ID=g11766.t1.utr3p1;Parent=g11766.t1 #PROT g11766.t1 g11766 MSSDFVSGLQGVVKMDVASLTYGSQVTFKHSATGGYLHSHSHLYPAGSMQQQMTAYGFKDHNNWWLLRRPQNGQNSTDPSIRTGAIVYIEHVATEKGVYMHGYPPPVSKPGDPPTLFEVSVNDDDGHQWELRIVTPGPPRGGRRVNPSDLTLGTSVRFIHRGGGGTAECAIASTPTRLPEWGFSQQEVTCSTDIESPNTLWIVDEANAAKAETFTVFPAQKDRSGFLTRLRDIWDIQFIAWDANKRIKGEHVFASRPEDWPGLKRGISYWQNNGKHAQVYLVGNPLVWWSAGPALALYVVMGAVYLIRGRRGCRDFDAEGRRRYILIIDFLVLGWFLHYAPFFAMDRQLFLHHYLPAHLFTLLGLGALADHCISWLRLRFRVAAIAVITAAVVWSFWYFAPLCYATPLLPDESAVRKWLPDWDFV* # ORIGINAL: g2853.t1 original gene structure, not modified by PASA NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS gene 2 663 . + . ID=g2853;Name=g2853.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS mRNA 2 663 . + . ID=g2853.t1;Parent=g2853;Name=g2853.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS exon 2 404 . + . ID=g2853.t1.exon1;Parent=g2853.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS CDS 2 404 . + 1 ID=cds.g2853.t1;Parent=g2853.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS exon 523 663 . + . ID=g2853.t1.exon2;Parent=g2853.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS CDS 523 663 . + 0 ID=cds.g2853.t1;Parent=g2853.t1 #PROT g2853.t1 g2853 AYLSGADGGAVSVSQNVDYMQAGQQDFGTVTIRDGTFARCLGTITGGAISASTTGSVGLGMDAPDPAAVFSRAVGILSDAANGHMPIGLTIDTCLFEANYAPRSSAVFSDGLVHSLIDSTTFMDNSAFSGGAMESGGLSWVHVIGSHLVRNAASRGGVISATLNSQVKIALTSMTNCVSL* # ORIGINAL: g2854.t1 original gene structure, not modified by PASA NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS gene 677 1265 . + . ID=g2854;Name=g2854.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS mRNA 677 1265 . + . ID=g2854.t1;Parent=g2854;Name=g2854.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS exon 677 1033 . + . ID=g2854.t1.exon1;Parent=g2854.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS CDS 677 1033 . + 0 ID=cds.g2854.t1;Parent=g2854.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS exon 1178 1265 . + . ID=g2854.t1.exon2;Parent=g2854.t1 NODE_4763_length_1265_cov_84.421_potentialcontaminant AUGUSTUS CDS 1178 1265 . + 0 ID=cds.g2854.t1;Parent=g2854.t1 #PROT g2854.t1 g2854 MADSDAVLELDGVVASNNSALEAGGFLSLWNNATAKVLRSNFTAHSAGEGGGFAFCGSNTALLLDTVRIEFACTGLMGGSFRLVSRASLTATNLVVTYSGAMRGGFIYMHDSTTATLKLTSAQFALSQSEGGAFYLNSEAKLYVDDSN # ORIGINAL: g2924.t1 original gene structure, not modified by PASA NODE_18246_length_190_cov_55.1826_potentialcontaminant AUGUSTUS gene 2 190 . + . ID=g2924;Name=g2924.t1 NODE_18246_length_190_cov_55.1826_potentialcontaminant AUGUSTUS mRNA 2 190 . + . ID=g2924.t1;Parent=g2924;Name=g2924.t1 NODE_18246_length_190_cov_55.1826_potentialcontaminant AUGUSTUS exon 2 190 . + . ID=g2924.t1.exon1;Parent=g2924.t1 NODE_18246_length_190_cov_55.1826_potentialcontaminant AUGUSTUS CDS 2 190 . + 2 ID=cds.g2924.t1;Parent=g2924.t1 #PROT g2924.t1 g2924 STTGSRPAPSSLVSARPSPISTWPSPSRYSTALPPTPRPSPRSSRTCGACTTLLCSSPRPSRS # ORIGINAL: g13399.t1 original gene structure, not modified by PASA NODE_1912_length_8594_cov_37.3078 AUGUSTUS gene 100 255 . + . ID=g13399;Name=g13399.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS mRNA 100 255 . + . ID=g13399.t1;Parent=g13399;Name=g13399.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 100 255 . + . ID=g13399.t1.exon1;Parent=g13399.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 100 255 . + 0 ID=cds.g13399.t1;Parent=g13399.t1 #PROT g13399.t1 g13399 QPQQPPEVRFERQLQQLADMGFFDQQENIAALTATRGNVNAAVERLLNAPR* # PASA_UPDATE: g13401.t1, single gene model update, valid-1, status:[pasa:asmbl_2996,status:12], valid-1 NODE_1912_length_8594_cov_37.3078 . gene 3614 8449 . - . ID=g13401;Name=g13401.t1 NODE_1912_length_8594_cov_37.3078 . mRNA 3614 8449 . - . ID=g13401.t1;Parent=g13401;Name=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 8339 8449 . - . ID=g13401.t1.exon1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 8339 8449 . - 0 ID=cds.g13401.t1;Parent=g13401.t1;5_prime_partial=true NODE_1912_length_8594_cov_37.3078 . exon 7759 7971 . - . ID=g13401.t1.exon2;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 7759 7971 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 7444 7533 . - . ID=g13401.t1.exon3;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 7444 7533 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 7084 7195 . - . ID=g13401.t1.exon4;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 7084 7195 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 6826 6921 . - . ID=g13401.t1.exon5;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 6826 6921 . - 2 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 6379 6538 . - . ID=g13401.t1.exon6;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 6379 6538 . - 2 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 5934 6061 . - . ID=g13401.t1.exon7;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 5934 6061 . - 1 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 5600 5771 . - . ID=g13401.t1.exon8;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 5600 5771 . - 2 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 5009 5107 . - . ID=g13401.t1.exon9;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 5009 5107 . - 1 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 4642 4816 . - . ID=g13401.t1.exon10;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 4642 4816 . - 1 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 4346 4450 . - . ID=g13401.t1.exon11;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 4346 4450 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 4067 4102 . - . ID=g13401.t1.exon12;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 4067 4102 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . exon 3614 3909 . - . ID=g13401.t1.exon13;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . CDS 3841 3909 . - 0 ID=cds.g13401.t1;Parent=g13401.t1 NODE_1912_length_8594_cov_37.3078 . three_prime_UTR 3614 3840 . - . ID=g13401.t1.utr3p1;Parent=g13401.t1 #PROT g13401.t1 g13401 VASARAGRSSDAAAVVRHFVSLAGDSAFNRARDCARETTADASGVCPFAGRTTTTTVRVGRCPRDSLAHGVSPIAVSSFDTHPGDAKVTEHSAGVSHRRRSVASGAVPHSLFPFSERSLVLQSKVRAFVEKIILPAEKIYFEEVNSSPNRWIIPSIMETLKTSAKAQGLWNLFLPAVSGLSNLDYAPLAEIMGQSLIASEVFNCSAPDTGNMEVLHMYASDQQKQTWLEPLLRGDIRSCFAMTEPDVASSDASNMRCLARRDGSEWVISGRKWWSTGAGDPRCRLCIVMCITEDASDPTLQSRPRHGRHSMIIVPMDAPGVVKVRPLTVFGYDDAPHGHLELRFDNVRVPYANVILGPGRGFEIAQGRLGPGRIHHCMRAIGLGERCLSLMCQRVTERVAFGKPLARHGSIVQDIGKARVAIETARLLTLHAAHAMDAVGNKRARREIAMIKVYAPNAIIKLVDKAIQSFGAAGLCEDFPLAVAFAGLRSLRIADGPDEVHLASLGKDEIVAQIAKAKSHL* # ORIGINAL: g13400.t1 original gene structure, not modified by PASA NODE_1912_length_8594_cov_37.3078 AUGUSTUS gene 712 2940 . - . ID=g13400;Name=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS mRNA 712 2940 . - . ID=g13400.t1;Parent=g13400;Name=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 2925 2940 . - . ID=g13400.t1.exon1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 2925 2940 . - 0 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 2631 2745 . - . ID=g13400.t1.exon2;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 2631 2745 . - 2 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 2273 2400 . - . ID=g13400.t1.exon3;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 2273 2400 . - 1 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 1928 2072 . - . ID=g13400.t1.exon4;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 1928 2072 . - 2 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 1393 1586 . - . ID=g13400.t1.exon5;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 1393 1586 . - 1 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 889 1098 . - . ID=g13400.t1.exon6;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 889 1098 . - 2 ID=cds.g13400.t1;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS exon 712 740 . - . ID=g13400.t1.exon7;Parent=g13400.t1 NODE_1912_length_8594_cov_37.3078 AUGUSTUS CDS 712 740 . - 2 ID=cds.g13400.t1;Parent=g13400.t1 #PROT g13400.t1 g13400 MAEITEEQVYHRLLIEQGDKRLALGIKSFKKWIRTPKESPKEEIDALHSKIIGSVEQVDLAVTKWRLMQDMNTAELTHYDDTQRNIERMIKDAEREVIELRGKLEEERAIRANRQQYDAMAKGIALQPSRSETNAKIAGVEAELRDLERSKLGLDGALELRRKQFAAFVHSIRDLQAAIASEDAVLGNGPAAEEPAEEEEPGSIADDGGFANDESTAMAVDNDTNAAPTPQPQPQPQPQPQQAAPDADPSAGTSAGAAAAQQGPPQATTDAPDAMETD* # PASA_UPDATE: g11487.t1, single gene model update, valid-1, status:[pasa:asmbl_6667,status:12],[pasa:asmbl_6668,status:12], valid-1 NODE_3875_length_2583_cov_55.2388 . gene 1 1560 . - . ID=g11487;Name=g11487.t1 NODE_3875_length_2583_cov_55.2388 . mRNA 1 1560 . - . ID=g11487.t1;Parent=g11487;Name=g11487.t1 NODE_3875_length_2583_cov_55.2388 . five_prime_UTR 1203 1560 . - . ID=g11487.t1.utr5p1;Parent=g11487.t1 NODE_3875_length_2583_cov_55.2388 . exon 783 1560 . - . ID=g11487.t1.exon1;Parent=g11487.t1 NODE_3875_length_2583_cov_55.2388 . CDS 783 1202 . - 0 ID=cds.g11487.t1;Parent=g11487.t1 NODE_3875_length_2583_cov_55.2388 . exon 1 132 . - . ID=g11487.t1.exon2;Parent=g11487.t1 NODE_3875_length_2583_cov_55.2388 . CDS 1 132 . - 0 ID=cds.g11487.t1;Parent=g11487.t1;3_prime_partial=true #PROT g11487.t1 g11487 MMQQNFVNPNASYSVVQPGMQQMQPMQYGMQQPMMQMQQQPMMQMQQPMMQMQQPMPMQMQQPMQMQMQPSGPMTIQQAVPAGNTFGGGIQQFGFANGGGLDQQQDGVSNAVNFKDVFMNKEVGVVAQDIIARLDGFADQFHAKLEEKDKLYENIYRSLPSAQTTIVKTIKAIDVNTQTRVALK # PASA_UPDATE: g11633.t1, single gene model update, valid-1, status:[pasa:asmbl_4825,status:12], valid-1 NODE_2695_length_5428_cov_37.8117 . gene 195 3824 . - . ID=g11633;Name=g11633.t1 NODE_2695_length_5428_cov_37.8117 . mRNA 195 3824 . - . ID=g11633.t1;Parent=g11633;Name=g11633.t1 NODE_2695_length_5428_cov_37.8117 . five_prime_UTR 3728 3824 . - . ID=g11633.t1.utr5p1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . five_prime_UTR 3307 3327 . - . ID=g11633.t1.utr5p2;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 3728 3824 . - . ID=g11633.t1.exon1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 3159 3327 . - . ID=g11633.t1.exon2;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . CDS 3159 3306 . - 0 ID=cds.g11633.t1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 2403 2579 . - . ID=g11633.t1.exon3;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . CDS 2403 2579 . - 2 ID=cds.g11633.t1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 1942 2117 . - . ID=g11633.t1.exon4;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . CDS 1942 2117 . - 2 ID=cds.g11633.t1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 757 1254 . - . ID=g11633.t1.exon5;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . CDS 757 1254 . - 0 ID=cds.g11633.t1;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . exon 195 458 . - . ID=g11633.t1.exon6;Parent=g11633.t1 NODE_2695_length_5428_cov_37.8117 . CDS 195 458 . - 0 ID=cds.g11633.t1;Parent=g11633.t1;3_prime_partial=true #PROT g11633.t1 g11633 MAMYRRGSFAFGSKADGVGDFVLMDSINEEAFMKNLELRFSKDHIYTYIGEVVVSMNPYKNVDIFANDIIKNYTGRYMYERPPHIYALADAAYQSMKRNLRDQCIVISGESGAGKTEASKIIMRYIAAVTGQGKKVDEVKDMLLQSNPVLEAFGNACTTRNDNSSRFGKYMDIDFDFKGDPVGGHISNYLLEKSRVVKQLKGERNFHVFYMLLKGAADAMIKQFNLDRDPGKYSYLNQSGCTSVKTVDDKKEFEAMSRGMKTIGFSQDEQTTLMALVGAILHMGNVEFQDSDDGKTCQIKSSPSLKHTAELLGTSADLLQKALTYRVVAARGEVMESPQTKEQSQHTREALAKAVYDRMFTWLVGRINDSIKYDVSGGKGTVIGVLDIYGFEIMPTNSFEQFCINFCNEKLQQLFIELVLK # PASA_UPDATE: g11634.t1, single gene model update, valid-1, status:[pasa:asmbl_4824,status:12], valid-1 NODE_2695_length_5428_cov_37.8117 . gene 4420 5354 . + . ID=g11634;Name=g11634.t1 NODE_2695_length_5428_cov_37.8117 . mRNA 4420 5354 . + . ID=g11634.t1;Parent=g11634;Name=g11634.t1 NODE_2695_length_5428_cov_37.8117 . five_prime_UTR 4420 4507 . + . ID=g11634.t1.utr5p1;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . exon 4420 4569 . + . ID=g11634.t1.exon1;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . CDS 4508 4569 . + 0 ID=cds.g11634.t1;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . exon 4809 4834 . + . ID=g11634.t1.exon2;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . CDS 4809 4834 . + 1 ID=cds.g11634.t1;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . exon 5066 5354 . + . ID=g11634.t1.exon3;Parent=g11634.t1 NODE_2695_length_5428_cov_37.8117 . CDS 5066 5354 . + 2 ID=cds.g11634.t1;Parent=g11634.t1;3_prime_partial=true #PROT g11634.t1 g11634 MSLFRIAALSRSAAVQMPALRAAFVRSASVGATMGPRSVVVTAAGPDRKGIVSDLSKQLKKHGANVEESRMTILGNDFAMIFLVTLPPKGTTPDELKRSLEDLFPEFIVAARDTSVVQSSPGGSK # ORIGINAL: g11750.t1 original gene structure, not modified by PASA NODE_3918_length_2515_cov_40.75 AUGUSTUS gene 219 872 . - . ID=g11750;Name=g11750.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS mRNA 219 872 . - . ID=g11750.t1;Parent=g11750;Name=g11750.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS exon 702 872 . - . ID=g11750.t1.exon1;Parent=g11750.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS CDS 702 872 . - 0 ID=cds.g11750.t1;Parent=g11750.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS exon 219 464 . - . ID=g11750.t1.exon2;Parent=g11750.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS CDS 219 464 . - 0 ID=cds.g11750.t1;Parent=g11750.t1 #PROT g11750.t1 g11750 MVGGQRSIANFFKRPLSDAAPTDAARKVARTDDGPSVASPPPAQSNGELVEALTPEQIDRMERNRQDALAKRLARQAVACTSPTASTSPVASPSSSSVPVTSPAPIASASDKFALERNTMGPTWFAALEKEMGKPYFAE # ORIGINAL: g11751.t1 original gene structure, not modified by PASA NODE_3918_length_2515_cov_40.75 AUGUSTUS gene 1879 2453 . + . ID=g11751;Name=g11751.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS mRNA 1879 2453 . + . ID=g11751.t1;Parent=g11751;Name=g11751.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS exon 1879 2060 . + . ID=g11751.t1.exon1;Parent=g11751.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS CDS 1879 2060 . + 0 ID=cds.g11751.t1;Parent=g11751.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS exon 2240 2453 . + . ID=g11751.t1.exon2;Parent=g11751.t1 NODE_3918_length_2515_cov_40.75 AUGUSTUS CDS 2240 2453 . + 1 ID=cds.g11751.t1;Parent=g11751.t1 #PROT g11751.t1 g11751 MPVLYPAVSALLDVLVSAFYNTIDVQGGNNVAKEGIPTIVFANHFNSLTDAALLVSQSPRRLRIAAKDTLWQHPVFKHFCNGVGAVPIKRRKDHGNQRVDNSKVESHKYRACRVLRVCDFCVNRVWMCMCG* # ORIGINAL: g4934.t1 original gene structure, not modified by PASA NODE_3756_length_2815_cov_39.1978 AUGUSTUS gene 1858 2672 . - . ID=g4934;Name=g4934.t1 NODE_3756_length_2815_cov_39.1978 AUGUSTUS mRNA 1858 2672 . - . ID=g4934.t1;Parent=g4934;Name=g4934.t1 NODE_3756_length_2815_cov_39.1978 AUGUSTUS exon 2556 2672 . - . ID=g4934.t1.exon1;Parent=g4934.t1 NODE_3756_length_2815_cov_39.1978 AUGUSTUS CDS 2556 2672 . - 0 ID=cds.g4934.t1;Parent=g4934.t1 NODE_3756_length_2815_cov_39.1978 AUGUSTUS exon 1858 2292 . - . ID=g4934.t1.exon2;Parent=g4934.t1 NODE_3756_length_2815_cov_39.1978 AUGUSTUS CDS 1858 2292 . - 0 ID=cds.g4934.t1;Parent=g4934.t1 #PROT g4934.t1 g4934 PAQHIFDYDTVILVGAGIGVTPFASVLTDIWHRNHAEAQDKLGALRRVYFNWLTRDQTSFGWFASLLNGLDRECADGNLALELNHYVTGAFDKTDLRSALLYMGMKTMSEAGDRCIFTGLSKHMNFGRPNWPDVFARVARHNPGSTIGVFACGPKAMCQELREACAAQTLSGGARFVFAKENF* # PASA_UPDATE: g4933.t1, single gene model update, valid-1, status:[pasa:asmbl_6498,status:12], valid-1 NODE_3756_length_2815_cov_39.1978 . gene 176 1225 . - . ID=g4933;Name=g4933.t1 NODE_3756_length_2815_cov_39.1978 . mRNA 176 1225 . - . ID=g4933.t1;Parent=g4933;Name=g4933.t1 NODE_3756_length_2815_cov_39.1978 . five_prime_UTR 876 1225 . - . ID=g4933.t1.utr5p1;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . exon 845 1225 . - . ID=g4933.t1.exon1;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . CDS 845 875 . - 0 ID=cds.g4933.t1;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . exon 531 619 . - . ID=g4933.t1.exon2;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . CDS 531 619 . - 2 ID=cds.g4933.t1;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . exon 176 353 . - . ID=g4933.t1.exon3;Parent=g4933.t1 NODE_3756_length_2815_cov_39.1978 . CDS 176 353 . - 0 ID=cds.g4933.t1;Parent=g4933.t1;3_prime_partial=true #PROT g4933.t1 g4933 MKMGTNEETPAHWLWGEQKRLFSAAKMEPLTCDAIALTGPEAAPPSETPKDPPKRFKWATSLDYTFKFDFANAIPMECVPSVTWDESIKGVDRSASGSG # PASA_UPDATE: g6213.t1, single gene model update, valid-1, status:[pasa:asmbl_2718,status:12], valid-1 NODE_1822_length_9059_cov_41.9627 . gene 3751 8674 . - . ID=g6213;Name=g6213.t1 NODE_1822_length_9059_cov_41.9627 . mRNA 3751 8674 . - . ID=g6213.t1;Parent=g6213;Name=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 8499 8674 . - . ID=g6213.t1.exon1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 8499 8674 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 8123 8197 . - . ID=g6213.t1.exon2;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 8123 8197 . - 1 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 7887 7981 . - . ID=g6213.t1.exon3;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 7887 7981 . - 1 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 7558 7634 . - . ID=g6213.t1.exon4;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 7558 7634 . - 2 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 7324 7449 . - . ID=g6213.t1.exon5;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 7324 7449 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 7074 7201 . - . ID=g6213.t1.exon6;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 7074 7201 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 6753 6885 . - . ID=g6213.t1.exon7;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 6753 6885 . - 1 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 6410 6544 . - . ID=g6213.t1.exon8;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 6410 6544 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 5918 6026 . - . ID=g6213.t1.exon9;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 5918 6026 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 5565 5767 . - . ID=g6213.t1.exon10;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 5565 5767 . - 2 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 5269 5349 . - . ID=g6213.t1.exon11;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 5269 5349 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 4822 4991 . - . ID=g6213.t1.exon12;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 4822 4991 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 4579 4675 . - . ID=g6213.t1.exon13;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 4579 4675 . - 1 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 4384 4487 . - . ID=g6213.t1.exon14;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 4384 4487 . - 0 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . exon 3751 4233 . - . ID=g6213.t1.exon15;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . CDS 4092 4233 . - 1 ID=cds.g6213.t1;Parent=g6213.t1 NODE_1822_length_9059_cov_41.9627 . three_prime_UTR 3751 4091 . - . ID=g6213.t1.utr3p1;Parent=g6213.t1 #PROT g6213.t1 g6213 MNPPQMFTGGPYTQIAVSPNGKLLALFSEQRKLSVITADFQQNFSEIATQLDSPAQLVWCGTDSVVGYWECMIVMFGPSKDIIKYVYEDHAFLISESDAVRIVTNTSHELLQRVPNAIEDTFKIGSTAAGAMLFDALDHFEKRSPKSDDLIRSLRGELKQAVETCIEAAGHEYRPESQQVLLRAASFGKCFADDIDAKSFVEMCRTLRVLNALRYYEIGIPMTYTQYIRLTPEAVVGQLIARNHHLLAFRICEYLGMRTERVLVHWARKKVRQQEDDGVLCDAIVAKLAEARGGISYALIAKTALSHGKPGLAIKLLEHEPCASDQVPLLVDMKEYELALRKAVDSGDTDLVYFVLLHIKEKLPRKEFLRLVHKTPAARDLFIVYARERDVGILRDLYYQDDRKFETANVTIAEAYSKATVIERSVLLKGAMGDYTESKEHAAIAKAVEYQIKLTDLQRDLEVQTRYRFLDLSVSDTIYRLILINHSKRAGEVRKDFGVQDRRFWWIKIRAHAQMRDWPELERFADSKKSPIGYLPFVDVCMQKDEPKEALKYVKRMPAEERVGVYVRIGAFEEAVETAFQLRDDDALNDIRSKAKNRKDILALIENKKAQLAARR* # ORIGINAL: g6212.t1 original gene structure, not modified by PASA NODE_1822_length_9059_cov_41.9627 AUGUSTUS gene 2431 3141 . - . ID=g6212;Name=g6212.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS mRNA 2431 3141 . - . ID=g6212.t1;Parent=g6212;Name=g6212.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 2431 3141 . - . ID=g6212.t1.exon1;Parent=g6212.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 2431 3141 . - 0 ID=cds.g6212.t1;Parent=g6212.t1 #PROT g6212.t1 g6212 MSIVLDIDATAPTVKKYKFRLRKYVPCLFKQRDEGSEDNKTVNSNGDGRHAQTIESAIPTATSNGEVEPNNAVSQDTDESNATQKKTSTLSSRRVQVLSSSSDSNRPSPRASASLADIACDMHDMHDDVLPMQTVVCDDLPALPSRLTHKRVSIMKTGGSLCGSQRRDSMRRVSFNALVDVQAALSPALYDRSTSVMEPLTPSRIQIIGQELALYKLTEMAVHRDSVSNISLPYVR* # ORIGINAL: g6211.t1 original gene structure, not modified by PASA NODE_1822_length_9059_cov_41.9627 AUGUSTUS gene 1466 2391 . + . ID=g6211;Name=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS mRNA 1466 2391 . + . ID=g6211.t1;Parent=g6211;Name=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 1466 1730 . + . ID=g6211.t1.exon1;Parent=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 1466 1730 . + 0 ID=cds.g6211.t1;Parent=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 1876 2014 . + . ID=g6211.t1.exon2;Parent=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 1876 2014 . + 2 ID=cds.g6211.t1;Parent=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 2283 2391 . + . ID=g6211.t1.exon3;Parent=g6211.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 2283 2391 . + 1 ID=cds.g6211.t1;Parent=g6211.t1 #PROT g6211.t1 g6211 MAFQSGKAVFVTVGTTRFDDMIRAVATPGVAKALSALGYTRVVAQIGAGTFEPPPSVDGVPDLLYSFYRYKDSLHADVTRADLVISHAGAGSILEALRARRPLVVVVNEGLMDNHQLELARKLAFDGHLIYATCSTLGDKLAGARFDALRPLEDGSVARFGALVDSAMGY* # ORIGINAL: g6210.t1 original gene structure, not modified by PASA NODE_1822_length_9059_cov_41.9627 AUGUSTUS gene 108 1014 . - . ID=g6210;Name=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS mRNA 108 1014 . - . ID=g6210.t1;Parent=g6210;Name=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 987 1014 . - . ID=g6210.t1.exon1;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 987 1014 . - 0 ID=cds.g6210.t1;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 795 886 . - . ID=g6210.t1.exon2;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 795 886 . - 2 ID=cds.g6210.t1;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 369 671 . - . ID=g6210.t1.exon3;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 369 671 . - 0 ID=cds.g6210.t1;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS exon 108 210 . - . ID=g6210.t1.exon4;Parent=g6210.t1 NODE_1822_length_9059_cov_41.9627 AUGUSTUS CDS 108 210 . - 0 ID=cds.g6210.t1;Parent=g6210.t1 #PROT g6210.t1 g6210 MFGAKKSPQVQMREQKRDMSRIQRDLERDRGALDKQEKQLEAEIKKMAKQGNTDAAKVLAKQLIRIREQRTKSHATSAKVTAIGAQTTVSGTTSHPMFASPSCLACPTNLVSFWMPLSFPPVVQAMNSQMKMAQAMGGATKAMTAMNKQMNIQDIQKNMQEFSQESMKMEMAEDM # ORIGINAL: g6407.t1 original gene structure, not modified by PASA NODE_626_length_19996_cov_40.6383 AUGUSTUS gene 18868 19596 . + . ID=g6407;Name=g6407.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS mRNA 18868 19596 . + . ID=g6407.t1;Parent=g6407;Name=g6407.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 18868 19047 . + . ID=g6407.t1.exon1;Parent=g6407.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 18868 19047 . + 0 ID=cds.g6407.t1;Parent=g6407.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 19210 19596 . + . ID=g6407.t1.exon2;Parent=g6407.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 19210 19596 . + 0 ID=cds.g6407.t1;Parent=g6407.t1 #PROT g6407.t1 g6407 MARSLAVVALVACVAASLACISAAAMTHEELHAAFGDFVSTYGKKYRDNVELNARMAVFKANLDLIEEMNAASDGTVYAPNQFADMTTEEFRSKILMRPSPAPVHAAYKYLDVKVSDALPDSFDWRDKNAVSEVQDQGVAGSCWAFSTAGLLEGRRAVQLGVLEPLSVEQLVACDFDDCGVFGVGGFL* # PASA_UPDATE: g6405.t1, single gene model update, valid-1, status:[pasa:asmbl_8556,status:12], valid-1 NODE_626_length_19996_cov_40.6383 . gene 10277 15495 . - . ID=g6405;Name=g6405.t1 NODE_626_length_19996_cov_40.6383 . mRNA 10277 15495 . - . ID=g6405.t1;Parent=g6405;Name=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 15111 15495 . - . ID=g6405.t1.exon1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 15111 15495 . - 0 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 14944 15027 . - . ID=g6405.t1.exon2;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 14944 15027 . - 2 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 14586 14788 . - . ID=g6405.t1.exon3;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 14586 14788 . - 2 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 13738 14417 . - . ID=g6405.t1.exon4;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 13738 14417 . - 0 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 13417 13529 . - . ID=g6405.t1.exon5;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 13417 13529 . - 1 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 13019 13172 . - . ID=g6405.t1.exon6;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 13019 13172 . - 2 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 12557 12798 . - . ID=g6405.t1.exon7;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 12557 12798 . - 1 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 10765 12358 . - . ID=g6405.t1.exon8;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 10765 12358 . - 2 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . exon 10277 10551 . - . ID=g6405.t1.exon9;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . CDS 10455 10551 . - 1 ID=cds.g6405.t1;Parent=g6405.t1 NODE_626_length_19996_cov_40.6383 . three_prime_UTR 10277 10454 . - . ID=g6405.t1.utr3p1;Parent=g6405.t1 #PROT g6405.t1 g6405 MWVKPSEVLLANALWTTVQTNNFFALQKRRGHGGSGITSLFVGTLDNVMESKPAPFRILLQTKSSDVSYVLATSETKEDIEKDWEWLKANLLAKLNGFEDKREAREFVRKKIESLVASEGKSPDDEDENSEAFKFSSAAKTFHKRFGMPQEERLANYYSCSYWKGRAPRQGWIYLSENHLCFYSYFLGKEAKLVVPWIEVMGLEKENTRGFIPDAIRVRTREKLYFFSLLLHRNDTFNLMEELAKMAMQRLLESNDEDAFGSSAAANAAAGVSAPKGSTGRRGTADGKRAEEALRRDLRLRAMSQKFRETFRLPTSEVLLREDVCVLSSSSHMAERTSFQGRLCLSANFVCFLSRREGECRVVIPFREVTAIAASDGASPSVHVRTRNRNHFFFHGLDSRDETLGACDDLLKAVRSREEMPTDPWDELSKTAEMKPALYTVFGNGADEGANAAVKEAGLESLWQMHFTEFGRGICMCRTVKELQLVKKGIPDTLRAELWLVFSGAINDWEGHRGYYARLLQECTGKESLATEEIERDLYRSLPEHPAYQSEIGIGALRRILQAYAWRNPAIGYCQAMNIVSSVLLLYASEEQAFWLLCAVSERLLPDYYSTKVVGALIDQGVFEQLMQEYLPDVYAHLDKLGVVSMVGISWFLTLFLSSMPFRAAVRVVDCFFWDGPKVLFQIGLAVLDFNSDGLLAARDDGDAMDQLNKFLKAVDSDGTNGNTPAGSGRPSTDGNAPPVVSMTSLIQRAYEVYGFITDKVVTNLRNKVRLKVVQGFQDSSKKSAINSVKSDCRFGPAELDLVYRLFQECRQKSAYWGVKGSGWNKRQIDGKQFRILFHRLSPWGRGQEAASLADTVFHYLDTDADGLIDFVVFVRCLDIVCRGDVKQRLRFLFDAHKPCDDSVAAAVPGSARGSLANSQTSQLMSTASSRSMSVNLLFGGGGEEAFFPVERFVELWRAMYSMFHGTAWEQEYFPAVTECGRTALSLAEEMASGAPPPSLGLAKEDNTPLISLNDSFDVRPVSPNVTSLSTSRGASIVPDVPVPQQTRARSASGLSKETEDLLSDVFCAPAPTDAHPNRSSVLERGSTTTLGAMGRSASSMGSVEDLAGADFDDSVSVTGIIGSAEGPEPPTMLPLSTRAMDEAAAGSHRGRVKFDMFLTAVQTQPLLVDFFSMQWNLLEQAS* # PASA_UPDATE: g6403.t1, single gene model update, valid-1, status:[pasa:asmbl_8555,status:12], valid-1 NODE_626_length_19996_cov_40.6383 . gene 204 5500 . - . ID=g6403;Name=g6403.t1 NODE_626_length_19996_cov_40.6383 . mRNA 204 5500 . - . ID=g6403.t1;Parent=g6403;Name=g6403.t1 NODE_626_length_19996_cov_40.6383 . five_prime_UTR 5048 5500 . - . ID=g6403.t1.utr5p1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 4868 5500 . - . ID=g6403.t1.exon1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 4868 5047 . - 0 ID=cds.g6403.t1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 4647 4734 . - . ID=g6403.t1.exon2;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 4647 4734 . - 0 ID=cds.g6403.t1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 4263 4342 . - . ID=g6403.t1.exon3;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 4263 4342 . - 2 ID=cds.g6403.t1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 791 3976 . - . ID=g6403.t1.exon4;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 791 3976 . - 0 ID=cds.g6403.t1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 532 621 . - . ID=g6403.t1.exon5;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 532 621 . - 0 ID=cds.g6403.t1;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . exon 204 296 . - . ID=g6403.t1.exon6;Parent=g6403.t1 NODE_626_length_19996_cov_40.6383 . CDS 204 296 . - 0 ID=cds.g6403.t1;Parent=g6403.t1;3_prime_partial=true #PROT g6403.t1 g6403 MDGAGRRASSFIDAFSLSFGNDKNGASGSQNNNRLSVSLNAGGSGANSPIQRSPSGSKKKNSESRDEQWLPLYRQQANKEGFLLKLGREGGFLPSKFERRYFILHRSNLFYFRKKEEDQPVGVIQLRGASVSRDPQSQPGKPLITINSLTSVNFESQKCFSKRPYTFIAESEDDAVQWIAYLQSAVATAAAEGSISRSQSSDTLAVPDDNESRSRSSTNQSRVSARTDSVGSAGHEEQLQASSNSFGASGRIGTGSAPGSRGGSPMQSRSGSQSDLMKGGGSLSRGNSTASLEDVPTGQRALDLQTCLFLTVDANAYKPLETDIAAVLSAIADIENGMSRVDLPEPLFMVPSVSVMVTAGRATLARAEAAAELFAKQSPLRKTIEKQVPVINTELLTAIARSAKDLRDFIHELAQSDIPVTSPEVVRRSEHARGLINGAKSLALALGDLEELTTTARFFGETIPKVKASRPSEAGRVYFVIDYVVEALELALGAIDETAKQLYVDVTTPLLVLAGKVLKGLSEPSAEAAFKKVDEETRTRRTRLAALVSELVRTTRIAVGVWPPPRATSDMLRYLLGVSCCTLTLVGSLQRYSELWRALVLDLDDLPQLHFERTQSEVALRKKSESVGGDAAEGGDGLALPAPARKRSDAAVTLSQVDVIKRMDHELRLNTIIIDSIAGMVPVVKEGTVKLNEYAAADDRTAGMATAGHILDAANEIVESVDPMEILQTDGELPQRWLECKKELSESIRTFKKLHENADQPSQHDFALQYLASQAKDVSIRTTNLMDVATQVMTSQQQKIDSHQRDLEMHNKKIERARGKMTALDDLYKNILSATASPQPSSPFAKTQQPQPDHSVSPDVPPPVPPLPPAPLERKVSRIGLIGVATSNASQAAHGNGGEDLPAMRPRMVTSVSLPVLPIDGTAAQKAALAPGTQSLGPKTGAALKAEEVKEVSDLNSLTFLDDESQKTISGHLVVKAGTLEKLVERLTHEKSLDPHYPTAFMLTYRSFTSPEDLLALLLARFKITDGDEKTKVIPVRLRVFNALKLWINTNWDDFKIPALLEKLKEIIGEMQESLSSGAGTLNKLIEAKTRDANAQKQKKFVFDSKAPQPILPPENMRSPERVSFLDIDPLEIARQLTLIEFGLFASIQPKECLDLAWTKSNRELAPGILGMIERSNKVSNWVATEVLKDESLKNRIKIVQHIVNIADKCRSLNNFNCVMAIIAGMTNSAIFRMKRTWE # PASA_UPDATE: g6404.t1, single gene model update, valid-1, status:[pasa:asmbl_8558,status:12], valid-1 NODE_626_length_19996_cov_40.6383 . gene 7374 9534 . + . ID=g6404;Name=g6404.t1 NODE_626_length_19996_cov_40.6383 . mRNA 7374 9534 . + . ID=g6404.t1;Parent=g6404;Name=g6404.t1 NODE_626_length_19996_cov_40.6383 . exon 7374 8229 . + . ID=g6404.t1.exon1;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . CDS 7374 8229 . + 0 ID=cds.g6404.t1;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . exon 8510 8594 . + . ID=g6404.t1.exon2;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . CDS 8510 8594 . + 2 ID=cds.g6404.t1;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . exon 8822 8897 . + . ID=g6404.t1.exon3;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . CDS 8822 8897 . + 1 ID=cds.g6404.t1;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . exon 9121 9534 . + . ID=g6404.t1.exon4;Parent=g6404.t1 NODE_626_length_19996_cov_40.6383 . CDS 9121 9534 . + 0 ID=cds.g6404.t1;Parent=g6404.t1 #PROT g6404.t1 g6404 MPTQQQGTHAHPYGFVEYHDSATAAAAIQTLNGQVFNSNELKVNWAQGGAIGAHGNTHPRSPSNFHMNGAAAAANAAGAMGSAPSGSGGQSPVLDDLTVFVGDLAPDVTDAMLSNAFAQFGGVVDARVIQDGHTGKSKGYGFVSFRVKADAERAMMELNGKWIGSRPVRTNWAARKGANGNSNASGSGSGAGPHGHMHPRPRSQFDNGGGAYGHRQYFTQAPPMHGGKGMPGGSAPGQSSGQHPGSHAGQHPGQPLQKLNYDVVVAQTSQYNTTVYVGGIGTAVTDNLLREQFVQFGYIMDVRINREKLYAFVRFTTHDSAARAIVAMNGSNLGGRVVKCSWGKEPNYGVVAAVMPGGDGYNYYSHTQMPFFGQYGYAPTMGGAGAYGGPRAIPPHQFQQMVAQQQAAIAAAAQAQAQAQAHASQQLQGTSQQGGDAQGGAGPTGASQSGAQDGGVSDGPGHVHAAQFQQATAAAY* # ORIGINAL: g6406.t1 original gene structure, not modified by PASA NODE_626_length_19996_cov_40.6383 AUGUSTUS gene 16287 18581 . + . ID=g6406;Name=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS mRNA 16287 18581 . + . ID=g6406.t1;Parent=g6406;Name=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 16287 16304 . + . ID=g6406.t1.exon1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 16287 16304 . + 0 ID=cds.g6406.t1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 16430 16602 . + . ID=g6406.t1.exon2;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 16430 16602 . + 0 ID=cds.g6406.t1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 16821 16950 . + . ID=g6406.t1.exon3;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 16821 16950 . + 1 ID=cds.g6406.t1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 17096 17263 . + . ID=g6406.t1.exon4;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 17096 17263 . + 0 ID=cds.g6406.t1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 17391 18301 . + . ID=g6406.t1.exon5;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 17391 18301 . + 0 ID=cds.g6406.t1;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS exon 18464 18581 . + . ID=g6406.t1.exon6;Parent=g6406.t1 NODE_626_length_19996_cov_40.6383 AUGUSTUS CDS 18464 18581 . + 1 ID=cds.g6406.t1;Parent=g6406.t1 #PROT g6406.t1 g6406 MGGGDLNFKKSWHPQTFQNVEKVWIAEQKKVAEDKKIQELLKEKEEERQMENLQLQAINAGHIKKKSDRLDWMYQGARSAAVVTKSREEYLLGKTVEMDKIKEEPPKSTNAPGSLFGQASTPLSVLDLESKIREDPLLMIKKREQESLKEILNNPVKMRQLKKLREATEGKKDKKDKKEKKEKKEKKEKKEKKEKRDRSPSPTAHSVKRPRSQSPPPQGRVNGDPRMTSGDADHKRARVDRSPSPQRKGRDEHVPTHERARLRSRSRSLSRSPHRRDHSRDDREDRRREGRGDDVRHSRDHEPRDHTRDERRDGASHREPERERDRERDRERDRARDRESHTNERNRREDGGRSGEEDRRRSDGGQQARSRSPLHRGDESARQHSREDGPRQARDPHHRQGHSSHRPAPRSIGTANVDDRAARLAAMQADAAWVDTERMRKVEMGREMERREEESAGAASAKGSFLDKVRVESISESASKSLQDRIKRNIHFVQRTAADLGSFLK* # PASA_UPDATE: g6952.t1, single gene model update, valid-1, status:[pasa:asmbl_4321,status:12], valid-1 NODE_2440_length_6266_cov_38.234 . gene 1570 6108 . - . ID=g6952;Name=g6952.t1 NODE_2440_length_6266_cov_38.234 . mRNA 1570 6108 . - . ID=g6952.t1;Parent=g6952;Name=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 5881 6108 . - . ID=g6952.t1.exon1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 5881 6108 . - 0 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 4933 5692 . - . ID=g6952.t1.exon2;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 4933 5692 . - 0 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 4412 4677 . - . ID=g6952.t1.exon3;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 4412 4677 . - 2 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 4127 4227 . - . ID=g6952.t1.exon4;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 4127 4227 . - 0 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 3511 3859 . - . ID=g6952.t1.exon5;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 3511 3859 . - 1 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 3046 3356 . - . ID=g6952.t1.exon6;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 3046 3356 . - 0 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 2730 2852 . - . ID=g6952.t1.exon7;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 2730 2852 . - 1 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 2525 2606 . - . ID=g6952.t1.exon8;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 2525 2606 . - 1 ID=cds.g6952.t1;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . exon 1570 2193 . - . ID=g6952.t1.exon9;Parent=g6952.t1 NODE_2440_length_6266_cov_38.234 . CDS 1570 2193 . - 0 ID=cds.g6952.t1;Parent=g6952.t1 #PROT g6952.t1 g6952 MTAGLDRALVIAASTATTLAASIDLAFDNAGRVVSYAGNAVPLFKCPRANYSCFPADATLQSDIDFTVSTLDNALKVVVGKSNSTFDGGILCRARECSFGNLVTKAIQWKFPRDCKIVLINSGGLRTNMAPGNLSLNTILGALPFRNALSWYKLSGAVLVSALQFSVNIVPNATTWFPNSGRSLPTGSGRFLQVAGLRLAFNPDKPSLQKLVLAEAWNEVKQQYLPVNPNEIYSVCSTAFTRQGGDDFTMLTDAAVNPYDFGPVLSDIVRDYVSAIGTVSAVYDNRIVVDNVTRVFCVRGCGGHGKCVADDVCACDVGYSGLTCEVVQYVDVCEVVYTDAKHFFQRLRYSWDYSRGGVVFVFVMIIAMMLEILGVMYYSWIFIRRPGQMVGSGAKGKLVRMNITNAIPVLSVLILMFQVTSLVLATNLGWAPLNVTDKAVSSVGLSQFSFTWYYWIMFSIAIIFVTYGAIMLGGATTHVLKARIGSLLLAPAPLLLPLLGTVAYIPITRTLLATMACRYTQYGAFMATASVCKVQCWHDDIHWAYVITGMILFLFYFPLSATSAHFWQELNDQLDITYIPFFHSATALSNLAMIIISVYFRDYVWFTIISLFIINGAMIVYIYLTQPCHIGWMNHWLLLAYFLGMYTALIGIFSEAIGGRRSMWPPGLLFAGWGIAFIATLVYDLWKYPTKFMRSADTDGLHKISSMFQSLRNSRGSGKVHHMHIAPGSTDFIRPLSTIEMEDFTTNVAGWAKEGALTEVAAKWILRMAHANSPIVAIIIRDAGNAPAKFIAYLECLGTSYDAAVAYAAEDSLRFAKLQHPEDSADIELHPMSVPDAESHAEKKERSPHLADARATHETSSASSGNVASLSQETHARKGSSSSGSRGKLFDGHQMRRGSVGPASGSVEAAFGDPEGVVEVNVPGASDATEGNEAAVNDVRNDAGLFD* # PASA_UPDATE: g3559.t1, single gene model update, valid-1, status:[pasa:asmbl_1840,status:12], valid-1 NODE_1518_length_10775_cov_37.9174 . gene 5712 9541 . + . ID=g3559;Name=g3559.t1 NODE_1518_length_10775_cov_37.9174 . mRNA 5712 9541 . + . ID=g3559.t1;Parent=g3559;Name=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 5712 5840 . + . ID=g3559.t1.exon1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 5712 5840 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 6033 6200 . + . ID=g3559.t1.exon2;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 6033 6200 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 6417 6473 . + . ID=g3559.t1.exon3;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 6417 6473 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 6682 6798 . + . ID=g3559.t1.exon4;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 6682 6798 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 7159 7275 . + . ID=g3559.t1.exon5;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 7159 7275 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 7528 7617 . + . ID=g3559.t1.exon6;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 7528 7617 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 7983 8094 . + . ID=g3559.t1.exon7;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 7983 8094 . + 0 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 8281 8403 . + . ID=g3559.t1.exon8;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 8281 8403 . + 2 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 8790 9003 . + . ID=g3559.t1.exon9;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 8790 9003 . + 2 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . exon 9353 9541 . + . ID=g3559.t1.exon10;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . CDS 9353 9497 . + 1 ID=cds.g3559.t1;Parent=g3559.t1 NODE_1518_length_10775_cov_37.9174 . three_prime_UTR 9498 9541 . + . ID=g3559.t1.utr3p1;Parent=g3559.t1 #PROT g3559.t1 g3559 MTADIAVNKRLDEWITVDRMDLTKLEPPKDEKAARKGPTALAKKTGAPSSGTATPTEVKRTVGRKRKVDDLNASVGAVTPQTPATPVPGEGEFTFDTAKKPKLAALEVEEALIAGEQEQTPAEKKRVGPPQTGSIWTSDDIVTRMKNIKLIQMGKYRVEPWYFSPYPEELTKVPCVYICDFCLDYVRSKTALERHTIKCTMRHPPGSEIYRKASISVFEVDGRKNKAYCQNLCLIAKLFLDHKTLYYDTDPFLFYVMTELDSTGFHIVGYFSKEKESSEEYNVACILTLPQYQRLGYGKLLIEFSYELSKIEGKTGSPEKPLSDLGLLSYRSYWSHAIMEVLRHFQGTMSIQEITQHTAIRTEDVLSTLQHLNLIRYYKGGYVICLTDDLIVGHDKSMAKRKIRIDPKCIQWTPIDWVKRGRW* # PASA_UPDATE: g3558.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1837,status:12],[pasa:asmbl_1838,status:12], valid-1 # PASA_UPDATE: g3558.t1, single gene model update, valid-1, status:[pasa:asmbl_1839,status:12], valid-1 NODE_1518_length_10775_cov_37.9174 . gene 117 4666 . - . ID=g3558;Name=g3558.t1 NODE_1518_length_10775_cov_37.9174 . mRNA 117 4666 . - . ID=g3558.t1.1.5b6be70a;Parent=g3558;Name=g3558.t1 NODE_1518_length_10775_cov_37.9174 . five_prime_UTR 4487 4666 . - . ID=g3558.t1.1.5b6be70a.utr5p1;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 4400 4666 . - . ID=g3558.t1.1.5b6be70a.exon1;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 4400 4486 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 4199 4235 . - . ID=g3558.t1.1.5b6be70a.exon2;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 4199 4235 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 3940 4008 . - . ID=g3558.t1.1.5b6be70a.exon3;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 3940 4008 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 3461 3538 . - . ID=g3558.t1.1.5b6be70a.exon4;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 3461 3538 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 3035 3081 . - . ID=g3558.t1.1.5b6be70a.exon5;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 3035 3081 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 2608 2728 . - . ID=g3558.t1.1.5b6be70a.exon6;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 2608 2728 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 2177 2365 . - . ID=g3558.t1.1.5b6be70a.exon7;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 2177 2365 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 2006 2034 . - . ID=g3558.t1.1.5b6be70a.exon8;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 2006 2034 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 1709 1806 . - . ID=g3558.t1.1.5b6be70a.exon9;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 1709 1806 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 1340 1470 . - . ID=g3558.t1.1.5b6be70a.exon10;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 1340 1470 . - 1 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 1034 1101 . - . ID=g3558.t1.1.5b6be70a.exon11;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 1034 1101 . - 2 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 671 754 . - . ID=g3558.t1.1.5b6be70a.exon12;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 671 754 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . exon 117 287 . - . ID=g3558.t1.1.5b6be70a.exon13;Parent=g3558.t1.1.5b6be70a NODE_1518_length_10775_cov_37.9174 . CDS 117 287 . - 0 ID=cds.g3558.t1.1.5b6be70a;Parent=g3558.t1.1.5b6be70a;3_prime_partial=true NODE_1518_length_10775_cov_37.9174 . mRNA 117 4666 . - . ID=g3558.t1;Parent=g3558;Name=g3558.t1 NODE_1518_length_10775_cov_37.9174 . five_prime_UTR 4487 4666 . - . ID=g3558.t1.utr5p1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 4400 4666 . - . ID=g3558.t1.exon1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 4400 4486 . - 0 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 4199 4235 . - . ID=g3558.t1.exon2;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 4199 4235 . - 0 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 3940 4014 . - . ID=g3558.t1.exon3;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 3940 4014 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 3461 3538 . - . ID=g3558.t1.exon4;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 3461 3538 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 3035 3081 . - . ID=g3558.t1.exon5;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 3035 3081 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 2608 2728 . - . ID=g3558.t1.exon6;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 2608 2728 . - 0 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 2177 2365 . - . ID=g3558.t1.exon7;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 2177 2365 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 2006 2034 . - . ID=g3558.t1.exon8;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 2006 2034 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 1709 1806 . - . ID=g3558.t1.exon9;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 1709 1806 . - 0 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 1340 1470 . - . ID=g3558.t1.exon10;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 1340 1470 . - 1 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 1034 1101 . - . ID=g3558.t1.exon11;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 1034 1101 . - 2 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 671 754 . - . ID=g3558.t1.exon12;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 671 754 . - 0 ID=cds.g3558.t1;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . exon 117 287 . - . ID=g3558.t1.exon13;Parent=g3558.t1 NODE_1518_length_10775_cov_37.9174 . CDS 117 287 . - 0 ID=cds.g3558.t1;Parent=g3558.t1;3_prime_partial=true #PROT g3558.t1.1.5b6be70a g3558 MFRSIAPRAQSGLCFRRAASTLARVAVQKNVISAAQPVLARVQPRMPVLRATAASRFFHRSSMTADEFKVVNTPHMADSITEGELARWTKHIGDFVNRDDVVAVIETDKVDIEVNAPESGTLVERFAEEGAKVVVATPLFKLKLGGAAAAPAPAAAPKPQAAPAPKKEAAPAAPKAEAPKAPAAAEPPKAAAAPTAPKKETPAPEVAKPAEAGQRTERRVKMTRMRLRIAERLKEAQNTNAMLTTFNEIDMSNISALRNQFKDDFLEKHKVKLGFMSAFVKASVVALQDQPVVNAVIEGQEIIYRDYIDISVAVATPKGLVVPVLRNCEKMSFADVEKSIAALGAKARTNDIAIEDMIGGTFTISNGGVYGSLMGTPIINPPQAAILGMHGIFDRPVAINGKV #PROT g3558.t1 g3558 MFRSIAPRAQSGLCFRRAASTLARVAVQKNVISAAQPVLARVAVQPRMPVLRATAASRFFHRSSMTADEFKVVNTPHMADSITEGELARWTKHIGDFVNRDDVVAVIETDKVDIEVNAPESGTLVERFAEEGAKVVVATPLFKLKLGGAAAAPAPAAAPKPQAAPAPKKEAAPAAPKAEAPKAPAAAEPPKAAAAPTAPKKETPAPEVAKPAEAGQRTERRVKMTRMRLRIAERLKEAQNTNAMLTTFNEIDMSNISALRNQFKDDFLEKHKVKLGFMSAFVKASVVALQDQPVVNAVIEGQEIIYRDYIDISVAVATPKGLVVPVLRNCEKMSFADVEKSIAALGAKARTNDIAIEDMIGGTFTISNGGVYGSLMGTPIINPPQAAILGMHGIFDRPVAINGKV # ORIGINAL: g3522.t1 original gene structure, not modified by PASA NODE_1693_length_9679_cov_40.0761 AUGUSTUS gene 1179 5406 . - . ID=g3522;Name=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS mRNA 1179 5406 . - . ID=g3522.t1;Parent=g3522;Name=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 5311 5406 . - . ID=g3522.t1.exon1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 5311 5406 . - 0 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 4864 4974 . - . ID=g3522.t1.exon2;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 4864 4974 . - 0 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 4204 4323 . - . ID=g3522.t1.exon3;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 4204 4323 . - 0 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 3634 3696 . - . ID=g3522.t1.exon4;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 3634 3696 . - 0 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 3232 3313 . - . ID=g3522.t1.exon5;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 3232 3313 . - 0 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 2452 2553 . - . ID=g3522.t1.exon6;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 2452 2553 . - 2 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 1715 2003 . - . ID=g3522.t1.exon7;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 1715 2003 . - 2 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 1388 1504 . - . ID=g3522.t1.exon8;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 1388 1504 . - 1 ID=cds.g3522.t1;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 1179 1188 . - . ID=g3522.t1.exon9;Parent=g3522.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 1179 1188 . - 1 ID=cds.g3522.t1;Parent=g3522.t1 #PROT g3522.t1 g3522 MTAYLPANLLGLFQARPALPHLPPVDLLPYEKTLPPYIGVAPFIEKFEDPATAPAVARKESIEERRARKKKERDERNRAKLEKNLKEYEPNANAAATEDAFKTLFVSRIAYDVTEADLRKEFEAYGPIKKIRLVANQKTGKPRGYAFIEFEHERDLRSAYKHADGKKINNKRVLVDVERGRTVRDWKPRRLGGGLGGKSRRGPNEEERPEDQEREREKERDREQTDRSGDRDRDRDRDRDKDRGDRDRDRGDRDGRGDRDRERDRDRGGDRSGDRDRDRDRDRDRKDRGSDRDRDRDRDRDRDREYGDRDRDRERDRYGDRDRDRDRRR* # ORIGINAL: g3523.t1 original gene structure, not modified by PASA NODE_1693_length_9679_cov_40.0761 AUGUSTUS gene 8017 8834 . + . ID=g3523;Name=g3523.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS mRNA 8017 8834 . + . ID=g3523.t1;Parent=g3523;Name=g3523.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 8017 8084 . + . ID=g3523.t1.exon1;Parent=g3523.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 8017 8084 . + 0 ID=cds.g3523.t1;Parent=g3523.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS exon 8405 8834 . + . ID=g3523.t1.exon2;Parent=g3523.t1 NODE_1693_length_9679_cov_40.0761 AUGUSTUS CDS 8405 8834 . + 1 ID=cds.g3523.t1;Parent=g3523.t1 #PROT g3523.t1 g3523 MAAVDTGSSRTDADKYHGCPAPTAVAGLGVPGVAAGPQNYWWVHGGQSTGLERPTNAAGYCRLESKLAAQFKDIHAAKGWVALELGMDDGSQVDWARVNGASGAERSDADWMPWSATSDGRGVEGRSVGNVGSRVAVGATDMRGKESANCGRRKPPAHQAIRRCQ* # ORIGINAL: g14338.t1 original gene structure, not modified by PASA NODE_1842_length_8964_cov_40.3772 AUGUSTUS gene 2751 8840 . + . ID=g14338;Name=g14338.t1 NODE_1842_length_8964_cov_40.3772 AUGUSTUS mRNA 2751 8840 . + . ID=g14338.t1;Parent=g14338;Name=g14338.t1 NODE_1842_length_8964_cov_40.3772 AUGUSTUS exon 2751 3218 . + . ID=g14338.t1.exon1;Parent=g14338.t1 NODE_1842_length_8964_cov_40.3772 AUGUSTUS CDS 2751 3218 . + 0 ID=cds.g14338.t1;Parent=g14338.t1 NODE_1842_length_8964_cov_40.3772 AUGUSTUS exon 3521 8840 . + . ID=g14338.t1.exon2;Parent=g14338.t1 NODE_1842_length_8964_cov_40.3772 AUGUSTUS CDS 3521 8840 . + 0 ID=cds.g14338.t1;Parent=g14338.t1 #PROT g14338.t1 g14338 MSALIRTPSTAADKGSDVASLASDVGVDGGTTGPCTRCHKVSGKGTPRCCAHCHRLYCGSCKAKDMKKDGKDWVCKGCKADGLSLKSSKSAVSVDGSVTGEIVCAHCAHASAKGTSRPCQDCAKTYCGKCKHKQMKRLGKGVWQCTTCSKQSVKSENVSLQSSLNGKSLNSTSTTIDLSTADHVHTKDSVEITTTEANATGNGPAVAHVIQDGTNPPADTRADAADVDLVTPSESAIDGLHQSAGDDDPRLSITDESDAASLAQSVTSLESTKRKKKRKGDAIVSRLTYSIRYTYPPTEDGVQRSDTINTDVALGSAATSIESAAPDDSTASEVITYSKEKVKHPKSGKVSRSSSLSSGDLLEEISSQPISQLQAQAQVQSSLPKLHKQLPHAQPQPQGREQHIVQQALPPRQPPAANPTHLKPDSHDATDAYSISSLDEDQGLSPVPVLKRAALASSAATATTASTFATASPTPSPKPAHRSPRISTRSATATGTDRGHSDEPSVDDLYENARRHVRSSSVSEGSRNGGDSSRSQSSFADDADDFDSADDAGFDEGVKAAASQKDRRQSTSLAPQYGQPFSYHSPDPSRSPHTRKPSLSEVHRANAVGSEEEAAAPVSALSFYLPKKTTATLPTHDANSHSPGGRRASLSAADAAQAGSSVHNASAAGWGTVVSEFRRKSLGPSSESADLSLSPMLTRVSSNASPLLSRSNDSRDEVSSSSSPLLRSRSPSISKAHEEKQDGAPAIAGRARSPSVSRGPASAPAAATATERSPMAAHSPTHSRAPDVRQTTPSLSTASHPHHVRSKSDDDGVAVKANVGESSRLSAPTKQTSAAEKAGATLPDSFSGLEEGDGAKSAALVEDLSRVTETRHSSNAPSHRPILAHVGVVAQKPTGPSSVTRSVGVDAPHVATATAADAANSPIRTLHPPAGVGASSGDPATPGSARKSSALSAPVALDAQPHSQQANHTSATGNASRKADAVVAKSHSAPPASTTAPVAPSQAIFAARTWSSTHSAFADEESSDDDGHDGDAAPPVKSAVDTEARGRRQGEPAYTASHSVKEAVAAITAASAASHSGTQHSTERGSKPDNMPVAPPPSSALSLERHAPGPVDAPVAHHVSAHHVRAQQSVPKGTMFLPPNTPNSSAPVLTAPAERRASTASPSPQSRLVEQPTAGAQSVGTHSVTADEAIENRGLTASSRTSGVPAHSAQRSSTMQPTIATQQRPPSSGSSQREDGAAITPADPHPQSRYHTESSERDDGRITSARETDRPHAHNLQHKQGSRDSVAAARSSSVESRARVSWANSDESNDDADADPTAVGRSRSPFERRPTPHFRDEDMSYSSANDDEPNPRVAEAPPKPRDARAPIVPAAAAGRPITHAPSQVAWGAAADMSMGADRPNPRGGRDVAGGADGENTNDGARTGRAARPAVSGRTRDHAAATARAVHGGRPDQRHDVAAASSGAPLRSSLRAASPSAAVLSVAARSRGADSMDTSATPTRNAVSGEGEQRRGRAPERMQPGHGPQRSHATLSQMSPVRARSVERDSQPTRQMHTAPDQQPRATTRQNYAPDMYDATGSSPQRRPLSAQNSRQSLGSPSRDSSVGVTLPTRGRPSAEHIHSAAPSARRNDAEYQGRHPPSAQVQQPQRRRPGEHDARQPAHETIPSRQEPMSRRSRSLSPSTARREMPTSDQYALYSAPRGAGRAGREGAVTTWDDRANRTQSPPPHSRPQQQRGRSPSPPRSTWRPVSVVDRTTYHEPGVFCSRPDCRVCVARRVEHYYTPDVPEIHVGLDRIAYGQLPQARNAARIDRSRLFYLTGSSFIEEVDALRVGDPLADEFAERYVALKAEIDRMRAVAPPIGSGNPTLRTSQRPAERGNLSASTERGGYAPPEHRGRVPSSNSMRSSSSASHLDSWSSDVLRTNNSSPSQSPR # PASA_UPDATE: g14337.t1, single gene model update, valid-1, status:[pasa:asmbl_2778,status:12], valid-1 NODE_1842_length_8964_cov_40.3772 . gene 111 2035 . + . ID=g14337;Name=g14337.t1 NODE_1842_length_8964_cov_40.3772 . mRNA 111 2035 . + . ID=g14337.t1;Parent=g14337;Name=g14337.t1 NODE_1842_length_8964_cov_40.3772 . five_prime_UTR 111 112 . + . ID=g14337.t1.utr5p1;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . exon 111 250 . + . ID=g14337.t1.exon1;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . CDS 113 250 . + 0 ID=cds.g14337.t1;Parent=g14337.t1;5_prime_partial=true NODE_1842_length_8964_cov_40.3772 . exon 418 551 . + . ID=g14337.t1.exon2;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . CDS 418 551 . + 0 ID=cds.g14337.t1;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . exon 685 2035 . + . ID=g14337.t1.exon3;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . CDS 685 1936 . + 1 ID=cds.g14337.t1;Parent=g14337.t1 NODE_1842_length_8964_cov_40.3772 . three_prime_UTR 1937 2035 . + . ID=g14337.t1.utr3p1;Parent=g14337.t1 #PROT g14337.t1 g14337 EIENQVDDVLRVLNLRHVRNSSIGDEVQRGISGGQKKRVNIAMELVANPALMILDEPTTGLDSTSSLEVVAHLKTIADSGRTIVAVIHQPRFEILQLFDDLLILGRGGRTVYNGPCQDAVEYFTSLGFVLPKSVNPADWFLDITMGKVARNGAPCNITDLPSLWECSQKKVSGIAVGRDVIRGSGIELQLVSGGSIPRAEKGRGSARESEIRKTPGIATQALVFLERALRQKYRQPSLTITFLFIHVVTALTLGAGFLSASRLYLPPLPDWVSDYCPPSLSEYCNEKPLSNIGVTQSSFFFSLALGSAAVIIAVLAFGDELHIYRREARSGSSTLAYFIAKNVSEIPWIIMGALTFTGVLAILLRPITMYGDFLTIAILLECSAWGLGYLVSVIFRKESAHVVGVVAIFAMCVCSGLTPSLRKVFDDFSVARVIWDLSFPRYVVEAAYIKIVAPYAEASSPFREAVLLTLDKLGYDVDNYSFDIGILFLIGFGYRVIAYFCLRRHSK* # PASA_UPDATE: g6490.t1, single gene model update, valid-1, status:[pasa:asmbl_1887,status:3], valid-1 NODE_1531_length_10671_cov_37.5244 . gene 3280 8402 . + . ID=g6490;Name=g6490.t1 NODE_1531_length_10671_cov_37.5244 . mRNA 3280 8402 . + . ID=g6490.t1;Parent=g6490;Name=g6490.t1 NODE_1531_length_10671_cov_37.5244 . five_prime_UTR 3280 3364 . + . ID=g6490.t1.utr5p1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 3280 3367 . + . ID=g6490.t1.exon1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 3365 3367 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 3563 3673 . + . ID=g6490.t1.exon2;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 3563 3673 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 3861 3985 . + . ID=g6490.t1.exon3;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 3861 3985 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 4312 4499 . + . ID=g6490.t1.exon4;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 4312 4499 . + 1 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 4661 4852 . + . ID=g6490.t1.exon5;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 4661 4852 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 5062 5145 . + . ID=g6490.t1.exon6;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 5062 5145 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 5393 5481 . + . ID=g6490.t1.exon7;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 5393 5481 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 5826 5930 . + . ID=g6490.t1.exon8;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 5826 5930 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 6242 6389 . + . ID=g6490.t1.exon9;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 6242 6389 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 6625 6750 . + . ID=g6490.t1.exon10;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 6625 6750 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 6874 7002 . + . ID=g6490.t1.exon11;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 6874 7002 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 7222 7295 . + . ID=g6490.t1.exon12;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 7222 7295 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 7399 7636 . + . ID=g6490.t1.exon13;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 7399 7636 . + 0 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . exon 7871 8402 . + . ID=g6490.t1.exon14;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . CDS 7871 8040 . + 2 ID=cds.g6490.t1;Parent=g6490.t1 NODE_1531_length_10671_cov_37.5244 . three_prime_UTR 8041 8402 . + . ID=g6490.t1.utr3p1;Parent=g6490.t1 #PROT g6490.t1 g6490 MHGRKRVDATPEAIAAKAQEREQKVTAYLGIADKVEQLRAQKVYTLEAFKVAEKMVVVNPDHYTTWNYRREMLDVFKGAMDEVEYGSVLSKEFALVETCIASHPKTYWLWNHRRWLIEACPAHDLKFELGLCDKLLMADARNFHCWDYRRFVARKSGVSAEDELAFTTHKINENFSNYSAWHYRSSLLPVVHPGDNGLPSQQALLDDFNLVQNACFTEPNDQSAWFYQRWLIGNVHAGLRVTQLYISRRSHAAKIVLSFSEPVQADTPSAIAVAIDGVAAPVTPWRALAEDADGYSNNWTCDLHSPLIVMEAQMSLCVKVDTSLVACDSLRQKDAAVKLIEESVLFAPGQREGSLWLCDRKAPIATVTKELLLKGLESCTQLLELEPDSKWTWITSVFLRQAIDARAHHDHVTAALDELTRIDPMRHGFYVDMKSRHVMRGLLRDSLAPRELGEDDGRLPEKRDVVATGKGLTSLGNMDGLVSAHTLDVSHNSLRSLEGVGAGLLLRKVIAEANAIEQIPPEFGGLTNLRTLNLKDNKISEVTAVKPLVEVQFLSLWLLGNPIARRYDYPNCVWKALPLLEKLDGHEKTHSAR* # ORIGINAL: g6491.t1 original gene structure, not modified by PASA NODE_1531_length_10671_cov_37.5244 AUGUSTUS gene 9127 10514 . - . ID=g6491;Name=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS mRNA 9127 10514 . - . ID=g6491.t1;Parent=g6491;Name=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS exon 10351 10514 . - . ID=g6491.t1.exon1;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS CDS 10351 10514 . - 0 ID=cds.g6491.t1;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS exon 10066 10211 . - . ID=g6491.t1.exon2;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS CDS 10066 10211 . - 1 ID=cds.g6491.t1;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS exon 9787 9852 . - . ID=g6491.t1.exon3;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS CDS 9787 9852 . - 2 ID=cds.g6491.t1;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS exon 9127 9326 . - . ID=g6491.t1.exon4;Parent=g6491.t1 NODE_1531_length_10671_cov_37.5244 AUGUSTUS CDS 9127 9326 . - 2 ID=cds.g6491.t1;Parent=g6491.t1 #PROT g6491.t1 g6491 GNGTQDIFISDPSVLYISVHRFSNGSFYPGTGAATACGVDAGEGFSVNIPWNHTGYGDAEYIRAFRRVVMPITTEFNPDIVLVSAGFDAALGDPKGGMSITPAGYAAMTSMLMGLAGGRVLLALEGGYNPPYMATCVAACVSTLLGVPSESSEVPPPIASRNEDCNVSPTAEATLEDVIAIQSRYWQCMRR* # PASA_UPDATE: g6489.t1, single gene model update, valid-1, status:[pasa:asmbl_1888,status:3], valid-1 NODE_1531_length_10671_cov_37.5244 . gene 838 3087 . - . ID=g6489;Name=g6489.t1 NODE_1531_length_10671_cov_37.5244 . mRNA 838 3087 . - . ID=g6489.t1;Parent=g6489;Name=g6489.t1 NODE_1531_length_10671_cov_37.5244 . five_prime_UTR 2659 3087 . - . ID=g6489.t1.utr5p1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 2653 3087 . - . ID=g6489.t1.exon1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 2653 2658 . - 0 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 2298 2479 . - . ID=g6489.t1.exon2;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 2298 2479 . - 0 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 1918 2069 . - . ID=g6489.t1.exon3;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 1918 2069 . - 1 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 1566 1675 . - . ID=g6489.t1.exon4;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 1566 1675 . - 2 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 1297 1367 . - . ID=g6489.t1.exon5;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 1297 1367 . - 0 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . exon 838 1138 . - . ID=g6489.t1.exon6;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . CDS 943 1138 . - 1 ID=cds.g6489.t1;Parent=g6489.t1 NODE_1531_length_10671_cov_37.5244 . three_prime_UTR 838 942 . - . ID=g6489.t1.utr3p1;Parent=g6489.t1 #PROT g6489.t1 g6489 MLRDNSSSARKPWVGVVGIVSGVVIPLAIMAYAFASSLRSVWISYDRLLLEQPVVTKSLTAGFIGALSDFVAQRFEGKRNYDYARTMRMSAIGLFIAGPVTHHYLNLLERVVPGRPSLPVVLKKIVIDQTMFGPVMLCTCFTALGLMEGQSLSGISSKLRRDFISTQTRGMALWSCANMISFGVVPLHLRPVFGGLVGFCWNIYVSSVANKHHPHQSAPSSTSAGGSNPAASVRQKLS* # PASA_UPDATE: g9279.t1, single gene model update, valid-1, status:[pasa:asmbl_267,status:12], valid-1 NODE_1071_length_14222_cov_43.9345 . gene 9609 11072 . + . ID=g9279;Name=g9279.t1 NODE_1071_length_14222_cov_43.9345 . mRNA 9609 11072 . + . ID=g9279.t1;Parent=g9279;Name=g9279.t1 NODE_1071_length_14222_cov_43.9345 . exon 9609 11072 . + . ID=g9279.t1.exon1;Parent=g9279.t1 NODE_1071_length_14222_cov_43.9345 . CDS 9609 10829 . + 0 ID=cds.g9279.t1;Parent=g9279.t1 NODE_1071_length_14222_cov_43.9345 . three_prime_UTR 10830 11072 . + . ID=g9279.t1.utr3p1;Parent=g9279.t1 #PROT g9279.t1 g9279 MQWSVNVSEGGEWMYGAAQAHHRALLAALAAVSLLFSLYRWLMRLPSKQLLNLFDRKSARFEETRRALFPPPYPNGWWKLCDVSDLDGGRVHSVSALGLDLVVFRGEDGAVGVLDAFCPHIGAHLGQGGRVVGNTLQCPFHGWQFDATGKCRHIPYCTGQVPAVARTRSWTSCVWTGMVFVWFDAEGRPPAYELAPIEGVDSSWVSLGCKQNFFDQHVSEMAENSADYFHFNYLHAPLPVPLIGRFFTVRHETQLYFPEEPERGHVSYFDNFAEVWLLNRFRLTFTRQKTVVTFEGPSVVHFHIATPLGGVHLVKTLLPVAPFRQYTEDLWLLEPQTPRWLARIVSFIAGGALEQDRQVWQNKRYNAKPVLVKGDGPFPAHRRWFRQFYSESSRQVAYGSAGPLDW* # ORIGINAL: g9280.t1 original gene structure, not modified by PASA NODE_1071_length_14222_cov_43.9345 AUGUSTUS gene 12126 12356 . - . ID=g9280;Name=g9280.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS mRNA 12126 12356 . - . ID=g9280.t1;Parent=g9280;Name=g9280.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 12126 12356 . - . ID=g9280.t1.exon1;Parent=g9280.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 12126 12356 . - 0 ID=cds.g9280.t1;Parent=g9280.t1 #PROT g9280.t1 g9280 MDLELADDGEETSVNLDTLVPYSGSMWYATTSALEQLIEADENSDAENSDYDNRHNIKIGRSKWMKTVHVNASFDL* # ORIGINAL: g9281.t1 original gene structure, not modified by PASA NODE_1071_length_14222_cov_43.9345 AUGUSTUS gene 12777 13730 . + . ID=g9281;Name=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS mRNA 12777 13730 . + . ID=g9281.t1;Parent=g9281;Name=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 12777 12972 . + . ID=g9281.t1.exon1;Parent=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 12777 12972 . + 0 ID=cds.g9281.t1;Parent=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 13137 13333 . + . ID=g9281.t1.exon2;Parent=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 13137 13333 . + 2 ID=cds.g9281.t1;Parent=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 13470 13730 . + . ID=g9281.t1.exon3;Parent=g9281.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 13470 13730 . + 0 ID=cds.g9281.t1;Parent=g9281.t1 #PROT g9281.t1 g9281 MALTFLLAANPTVVVALSLALGSPKFVETLTPAVGNEAFVELTLPLAMFLKCLGHELDDLGANSQASGPRRMFSLPTFLTLAVGATVPQIRVLSVWGTSSLTAVKDVTAAAVCFESVPLANFLKVALSYFEDYRAWTNLRAYYARFDWTGLYASYFNLVGAPPEPSLSSLSSEQRGINNEFVGDFNKYLGGRANELMIWYDPIVSGSFGEIAKKWHL* # PASA_UPDATE: g9277.t1, single gene model update, valid-1, status:[pasa:asmbl_268,status:3], valid-1 NODE_1071_length_14222_cov_43.9345 . gene 3881 6212 . + . ID=g9277;Name=g9277.t1 NODE_1071_length_14222_cov_43.9345 . mRNA 3881 6212 . + . ID=g9277.t1;Parent=g9277;Name=g9277.t1 NODE_1071_length_14222_cov_43.9345 . five_prime_UTR 3881 3967 . + . ID=g9277.t1.utr5p1;Parent=g9277.t1 NODE_1071_length_14222_cov_43.9345 . exon 3881 5446 . + . ID=g9277.t1.exon1;Parent=g9277.t1 NODE_1071_length_14222_cov_43.9345 . CDS 3968 5446 . + 0 ID=cds.g9277.t1;Parent=g9277.t1 NODE_1071_length_14222_cov_43.9345 . exon 5755 6212 . + . ID=g9277.t1.exon2;Parent=g9277.t1 NODE_1071_length_14222_cov_43.9345 . CDS 5755 5913 . + 0 ID=cds.g9277.t1;Parent=g9277.t1 NODE_1071_length_14222_cov_43.9345 . three_prime_UTR 5914 6212 . + . ID=g9277.t1.utr3p1;Parent=g9277.t1 #PROT g9277.t1 g9277 MAIAKRIWRSCRVALAMTFIFCAVSLTISGSRTAVLPNSAAWIWTAHTAHDDSDLLGVDGNLGDSAGGRNALGEQLPLTTTSLSALVSDKAQPVTHTLRVSANNQDAPANYIFPAVAAVIEELDGKVPDAKEQSNVSPSESDGASRNVLCEMRQSCALPSMYEGVECGVRIVGNAHTDQNHLFDGRSIAEYVRRTFEHLPFCTTGDAAGRWLVACPITVFALDSPPPSPMRLSQSRSEAGWVSPNASTCDWDRAIWQPYECRLPDLSVEEARECLADYHVVTLGDSTLRGIINATVDVAGLDGMVHKHEYWSGATMGIPLSFMFFPRCKIFDNERCIEPADALYQTASRAVAEWALTAAAAAERGDRRPAESPAPRSLSMHPRRRRRRRPVVIFGTRKTKRDDVAWMRNVMGNATLLAAIDGLHRQAEGLSDAVEDATHPPIVECVGGTCEPIVILVGRGISSHDSVRGNVHHNNEVQTAVLASGIRFLDTMQVIHPAEHLRTVDGCMCHFRSYDGHAPRGRRVGVPVDHELARLVYGVLGCHTS* # ORIGINAL: g9276.t1 original gene structure, not modified by PASA NODE_1071_length_14222_cov_43.9345 AUGUSTUS gene 479 2648 . + . ID=g9276;Name=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS mRNA 479 2648 . + . ID=g9276.t1;Parent=g9276;Name=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 479 656 . + . ID=g9276.t1.exon1;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 479 656 . + 0 ID=cds.g9276.t1;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 874 1046 . + . ID=g9276.t1.exon2;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 874 1046 . + 2 ID=cds.g9276.t1;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 1358 1625 . + . ID=g9276.t1.exon3;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 1358 1625 . + 0 ID=cds.g9276.t1;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 1865 1915 . + . ID=g9276.t1.exon4;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 1865 1915 . + 2 ID=cds.g9276.t1;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 2236 2648 . + . ID=g9276.t1.exon5;Parent=g9276.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 2236 2648 . + 2 ID=cds.g9276.t1;Parent=g9276.t1 #PROT g9276.t1 g9276 MATVTDVLITAARVLIGTQFGAVLLATILVASVAALQGCSAEIHAPVERVVILADPGVDDTMAILLAVASPELRVEGIVVTYGNNGNTTLLGLNALRILGVANRTDIPVFLGSSDPLTHSYVENGGYKFHGANGLGNIDVPLPENARIQEESGVDFIVRMCRQHPGEITIVSLSPLTTIAMAYKTEPRIAVLARRFVMMGGTVRETGNVHPLGEANVFNDAMGAHVVFTAGWNVTMAPLDVTMATRLTEEYLDGFASPGNACGRLITDITRFYLNAYRTIVGVNFMPVHDSSAIVAMLRPDLYTGTTVYVDVETEGLMTSGTTVADFNGNFGKTPQTHLLMTVDADGVRDLLKQRIATLP* # ORIGINAL: g9278.t1 original gene structure, not modified by PASA NODE_1071_length_14222_cov_43.9345 AUGUSTUS gene 6572 8976 . - . ID=g9278;Name=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS mRNA 6572 8976 . - . ID=g9278.t1;Parent=g9278;Name=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 8848 8976 . - . ID=g9278.t1.exon1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 8848 8976 . - 0 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 8423 8589 . - . ID=g9278.t1.exon2;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 8423 8589 . - 0 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 8027 8165 . - . ID=g9278.t1.exon3;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 8027 8165 . - 1 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 7663 7779 . - . ID=g9278.t1.exon4;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 7663 7779 . - 0 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 7272 7389 . - . ID=g9278.t1.exon5;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 7272 7389 . - 0 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 6939 7056 . - . ID=g9278.t1.exon6;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 6939 7056 . - 2 ID=cds.g9278.t1;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS exon 6572 6680 . - . ID=g9278.t1.exon7;Parent=g9278.t1 NODE_1071_length_14222_cov_43.9345 AUGUSTUS CDS 6572 6680 . - 1 ID=cds.g9278.t1;Parent=g9278.t1 #PROT g9278.t1 g9278 MTRVTAELIAASATTKRLKTESLEQYLARITHANLAGKGIEDIENFRGCRHLSVLYLYENQIESMRSISCLTGLTHLYLQDNRIRKIEGLEGLTRVTKLYLNNNEIETVEGLESLVALQELYLQNQRIPEGHSLWFKPSVAEALSRNLRILNISNNSISSIDMIVELKGIHTLIAANNKIESAETLCQHVAQLRSLTNLDLRGNPICDLTKYRERIIIASSSLSVLDDKKIADNERRFLVSLKAVHVARQRKASEPNDRGVSGSPQVLFEDDFGDVPQLAYNAAHPKGHAGRSQRTHV* # ORIGINAL: g2044.t1 original gene structure, not modified by PASA NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS gene 115 1359 . - . ID=g2044;Name=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS mRNA 115 1359 . - . ID=g2044.t1;Parent=g2044;Name=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 1282 1359 . - . ID=g2044.t1.exon1;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 1282 1359 . - 0 ID=cds.g2044.t1;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 1062 1101 . - . ID=g2044.t1.exon2;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 1062 1101 . - 0 ID=cds.g2044.t1;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 852 907 . - . ID=g2044.t1.exon3;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 852 907 . - 2 ID=cds.g2044.t1;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 644 721 . - . ID=g2044.t1.exon4;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 644 721 . - 0 ID=cds.g2044.t1;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 115 453 . - . ID=g2044.t1.exon5;Parent=g2044.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 115 453 . - 0 ID=cds.g2044.t1;Parent=g2044.t1 #PROT g2044.t1 g2044 MGDRRRRVKPEDSEEEGSDTELTHSEDSASDVSGESDDDDAGGDVAAEGKSGEAASAQDGKEDATDKDKESGAAGRGRGRRPKEDPSVVPRAGGYFMHDDRDGSSDGPAAGRRGGRGGRGGGRRGSGGAGRRDSVGESAADSGNGDVGDGTADATQGDSPSGEDAGVVKGAPHARPKGEDKWQHDKYADADASSPRP # ORIGINAL: g2045.t1 original gene structure, not modified by PASA NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS gene 2920 8004 . + . ID=g2045;Name=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS mRNA 2920 8004 . + . ID=g2045.t1;Parent=g2045;Name=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 2920 2943 . + . ID=g2045.t1.exon1;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 2920 2943 . + 0 ID=cds.g2045.t1;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 3192 4233 . + . ID=g2045.t1.exon2;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 3192 4233 . + 0 ID=cds.g2045.t1;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 4384 5293 . + . ID=g2045.t1.exon3;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 4384 5293 . + 2 ID=cds.g2045.t1;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 5568 7492 . + . ID=g2045.t1.exon4;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 5568 7492 . + 1 ID=cds.g2045.t1;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS exon 7679 8004 . + . ID=g2045.t1.exon5;Parent=g2045.t1 NODE_2027_length_8033_cov_41.3585_potentialcontaminant AUGUSTUS CDS 7679 8004 . + 2 ID=cds.g2045.t1;Parent=g2045.t1 #PROT g2045.t1 g2045 MADIDIAKHGPISASGVVSGKRGAPLPGHVEGMARGAVGMKERKSEPARRADSKFFLWTVINPGHPSVVTKTTAPAAEKVSRVEADRGGKASVDSVWTRVSPPPLSYPSHRTLLHPPGAAAGNQSAQQGGALTARRVTSGDSSRAKARDEFLSLRTRIISALRDGPKQALELAVSRTPSSGATPDAAQRVHPILPMPPASVLALPVGLVAANVAGGASQTPYGVAGGADLRQASSWQLRPERTAVNATQLEGKSGVFTNSGTVVEHNGSADTQEATRSAFPPPSSRTVATAEGVQHPQTVITSKCDSSDSHVVDAGGKRDLGDRAKPGAAGSAPSITVASPQTYATSRHIASLEAVLLMHKRSSSTWLYGHTDPNGPHPEDVGEPTTDAAAAHSEFRQVKKEGRQQRPYRPILPASAAAVGSNAPSSPVSEANQHRLPNSGIDGIGEVGTAEDVDEALEGRSSPQPVSASGAEEQPYSATIGEGLESVSRLEEGAIQTAPNVSVDAHTEGTLASATEGPTAQSMPSFAASLPEECLYCIADNKLWARPVVPNSSLRSSWHLISDASGFAAFCCFGGELFAFGRPSVCVRRCEPSPGWTEVPSSGRLGEWNASNVRCACAAAAGVIVLVDDFTPDVSVHAQHLLFRPAEYFRRRASLSDGWSHIARVSDVCSITIAVSVAANAAVNEVVSSEVLSPACSYALVALCHGRLLWADLAETVAAPFAGGGLQWTDFCAAAGVVGVTYDIFRCQLYALTESAKVWVLSAVVVATTEGSGERKLVAGNSWNDVCDAYNTSSILMGPSPHGEAFKAQFGLHHSATAWVTAPSHMVVLPPPLEAPVIAQAPSPTQQPRILAKMHRVGGIPPYEYNQRFAQVQQMQLLQQQESHLRVPNATSLTASPTYNRVLASLHHTSEDSWDGMAQSTRGHLQASASVGAASAPGHARRRLPAYESAVDEINAQAVHKQQQHFQKQNQPPEQQQRQQQFPLPPQLVASYPQWAQGSTDVSMKNLQPGMNAQFAMPDREARIARPQQIRPPVQRTVDAVYIANGNRLNIVRISAASAPSYQLAVTHVATVPEVSSIYGITGSGNCVVLLCKQNFYVWSGGSFGGDASRCLPLGIAPKGLKSIAINADTVYGVARLDARGGVADDDDPNGELQTFDGDASSPLRQWGVFGARVSDGALGSPHKWAQVCLLPAAVAKDQPCGVVASGEFLFALCGTRIHAARVSGAPPGKVTSWKILGDAPAGAHAISTIGGRLLAASASRMWVCVGATDSDAAAGLIWTSLGRTLPGVVAIGVGPHVAATIPPNQGLAAALLSERFSFQPLSQRPYARTICMVKKDKNTSLGFFIQIDSGDELGAAVCVDMNECAAFHTVTKVVKFALFLSRVILVHMPPPRMHHTYIRTCIWLTS* # ORIGINAL: g2737.t1 original gene structure, not modified by PASA NODE_5170_length_983_cov_61.9681_potentialcontaminant AUGUSTUS gene 7 546 . + . ID=g2737;Name=g2737.t1 NODE_5170_length_983_cov_61.9681_potentialcontaminant AUGUSTUS mRNA 7 546 . + . ID=g2737.t1;Parent=g2737;Name=g2737.t1 NODE_5170_length_983_cov_61.9681_potentialcontaminant AUGUSTUS exon 7 546 . + . ID=g2737.t1.exon1;Parent=g2737.t1 NODE_5170_length_983_cov_61.9681_potentialcontaminant AUGUSTUS CDS 7 546 . + 0 ID=cds.g2737.t1;Parent=g2737.t1 #PROT g2737.t1 g2737 MLQRAAQNDSTIKVTNARISVPMFDAAGREVRLPASAVLYGSVVDKLSTTPEKSTPRIGTVGADTFDPLRVGPPFDKRRIWFPRVDVSPVSAVPPGQPLQYSPIACADSPSNFSAEAECAGESLSAAIESWIKAKETLSSGIVIGLRNDSPMSVVWLLTSKQPVLSFEFKGTLRVFAAH* # ORIGINAL: g10971.t1 original gene structure, not modified by PASA NODE_1796_length_9192_cov_37.9786 AUGUSTUS gene 763 5533 . + . ID=g10971;Name=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS mRNA 763 5533 . + . ID=g10971.t1;Parent=g10971;Name=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 763 835 . + . ID=g10971.t1.exon1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 763 835 . + 0 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 988 1191 . + . ID=g10971.t1.exon2;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 988 1191 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 1440 1551 . + . ID=g10971.t1.exon3;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 1440 1551 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 1737 1919 . + . ID=g10971.t1.exon4;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 1737 1919 . + 1 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 2054 2179 . + . ID=g10971.t1.exon5;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 2054 2179 . + 1 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 2656 2731 . + . ID=g10971.t1.exon6;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 2656 2731 . + 1 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 3050 3185 . + . ID=g10971.t1.exon7;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 3050 3185 . + 0 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 3357 3452 . + . ID=g10971.t1.exon8;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 3357 3452 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 3676 3840 . + . ID=g10971.t1.exon9;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 3676 3840 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 4097 4238 . + . ID=g10971.t1.exon10;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 4097 4238 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 4496 4650 . + . ID=g10971.t1.exon11;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 4496 4650 . + 1 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 5009 5135 . + . ID=g10971.t1.exon12;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 5009 5135 . + 2 ID=cds.g10971.t1;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS exon 5356 5533 . + . ID=g10971.t1.exon13;Parent=g10971.t1 NODE_1796_length_9192_cov_37.9786 AUGUSTUS CDS 5356 5533 . + 1 ID=cds.g10971.t1;Parent=g10971.t1 #PROT g10971.t1 g10971 MAPPRAAELRRLFTMAKDERGQLIVAIGLLLVSSGVTMAVPYAIGKMIDVIFGAEDKAAMRERLVDLSRVLVAVFIVGAIANYGRIVLIQMSGEKIVRRLRQTLYGNVLRQEMAFFDKNQSGELINRHVMLSSDTVVVAKALTDHVSDGLRSIAHAAVGIAMMVNMSGDLTKVVLQIVLPTVSVAALIYGRYVKDISRQVQSALADTTRVASERITNVRTVRAFGQEEPESKRYNIATDSVFGLAKKEAHARGAFHGATGFAGNMMMLGVLWNGGHMMMEGAITVGNLASFLMYSATVGVSIIGVSSFYTDLMKGVGASGRIWDLLDKKPTIPSSGGLRPDAASFDGDIRFEKVCFAYPTRTDAPVFKDLDLAVAAGRSLAVVGPSGSGKSTVAGLLLRLYDPDGGRVFVGNHDVRDLDPQWLRERVGLVSQEPALFSGSIAENISYGRPDATMDEIVAAAKQANASQFIEEFPDGYNTVVGERGQSLSGGQRQRVAIARALIKNPRILVLDEATSALDAQSEHLVQEALERIMKERTVIVIAHRLSTVKTADTIAVLNNGRVEEQGTYADLMAKENGTFRRLVARQTNF* # PASA_UPDATE: g10972.t1, single gene model update, valid-1, status:[pasa:asmbl_2643,status:3], valid-1 NODE_1796_length_9192_cov_37.9786 . gene 6114 8726 . - . ID=g10972;Name=g10972.t1 NODE_1796_length_9192_cov_37.9786 . mRNA 6114 8726 . - . ID=g10972.t1;Parent=g10972;Name=g10972.t1 NODE_1796_length_9192_cov_37.9786 . five_prime_UTR 8706 8726 . - . ID=g10972.t1.utr5p1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 8598 8726 . - . ID=g10972.t1.exon1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 8598 8705 . - 0 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 8341 8451 . - . ID=g10972.t1.exon2;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 8341 8451 . - 0 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 7981 8140 . - . ID=g10972.t1.exon3;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 7981 8140 . - 0 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 7705 7850 . - . ID=g10972.t1.exon4;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 7705 7850 . - 2 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 7389 7508 . - . ID=g10972.t1.exon5;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 7389 7508 . - 0 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 6629 6782 . - . ID=g10972.t1.exon6;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 6629 6782 . - 0 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . exon 6114 6455 . - . ID=g10972.t1.exon7;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . CDS 6130 6455 . - 2 ID=cds.g10972.t1;Parent=g10972.t1 NODE_1796_length_9192_cov_37.9786 . three_prime_UTR 6114 6129 . - . ID=g10972.t1.utr3p1;Parent=g10972.t1 #PROT g10972.t1 g10972 MRGVVFAASSLASSASTRLLFGRFARRLHNMAAADKIILPIADDLHVHLRQESMMKMVVPQIRKGGVGRVLVMPNLKPPVSSVDYALKYQRELQDVDPSVTYLMTLYLGPEVTPEEIAKAAAAGIVGVKSYPRGVTTNSESGIESYTVYYPVFKAMEEHGMVLNIHGEVPSDASKNICVLNAEEHFLRHLEEIHRDFPRLRIVLEHVTTAAAVEKVKSLGSTVGATITVHHLELTVDDWAGRNHNFCKPVAKYPADRDALRAVVREGHDRFFLGSDSAPHARKTKETAVGCAGVFTQPYILPYLAHTLEKIGCLDNLHKFACDNGRKFYGLPEARETVTLVRSPLKVADEFPFGEGEGAVVPFLANEAISWQLQ* # PASA_UPDATE: g11003.t1, single gene model update, valid-1, status:[pasa:asmbl_8193,status:12], valid-1 NODE_5608_length_781_cov_173.188 . gene 1 741 . - . ID=g11003;Name=g11003.t1 NODE_5608_length_781_cov_173.188 . mRNA 1 741 . - . ID=g11003.t1;Parent=g11003;Name=g11003.t1 NODE_5608_length_781_cov_173.188 . five_prime_UTR 711 741 . - . ID=g11003.t1.utr5p1;Parent=g11003.t1 NODE_5608_length_781_cov_173.188 . exon 1 741 . - . ID=g11003.t1.exon1;Parent=g11003.t1 NODE_5608_length_781_cov_173.188 . CDS 1 710 . - 0 ID=cds.g11003.t1;Parent=g11003.t1;3_prime_partial=true #PROT g11003.t1 g11003 MADATVTISPISDGSHEMLSVTIPNASGVTATFASGTLTLQGAAVASVYQDILRTVKYRNTADEPTGGDRTITFSVSDGDFSSGDQTATVTVSLVNDKTPVLSLNGASANRSVTFVEDSSTPVALTTNALSLTDADSGNMPLFGALVVVLDGQDGSNEALAATASGGITVAYDDATYTLSLSGQASVAAYAAVLKTVTYVNLADEPVQGSRRVGFAVSDGDFISESVYSFVTISYV # PASA_UPDATE: g3168.t1, single gene model update, valid-1, status:[pasa:asmbl_1245,status:12], valid-1 NODE_1337_length_11983_cov_41.9825 . gene 277 3755 . - . ID=g3168;Name=g3168.t1 NODE_1337_length_11983_cov_41.9825 . mRNA 277 3755 . - . ID=g3168.t1;Parent=g3168;Name=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 3607 3755 . - . ID=g3168.t1.exon1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 3607 3755 . - 0 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 3250 3504 . - . ID=g3168.t1.exon2;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 3250 3504 . - 1 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 3025 3127 . - . ID=g3168.t1.exon3;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 3025 3127 . - 1 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 2810 2899 . - . ID=g3168.t1.exon4;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 2810 2899 . - 0 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 2602 2707 . - . ID=g3168.t1.exon5;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 2602 2707 . - 0 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 2078 2429 . - . ID=g3168.t1.exon6;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 2078 2429 . - 2 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 1789 1903 . - . ID=g3168.t1.exon7;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 1789 1903 . - 1 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 1440 1576 . - . ID=g3168.t1.exon8;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 1440 1576 . - 0 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 1227 1285 . - . ID=g3168.t1.exon9;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 1227 1285 . - 1 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 976 1072 . - . ID=g3168.t1.exon10;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 976 1072 . - 2 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 658 771 . - . ID=g3168.t1.exon11;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 658 771 . - 1 ID=cds.g3168.t1;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . exon 277 376 . - . ID=g3168.t1.exon12;Parent=g3168.t1 NODE_1337_length_11983_cov_41.9825 . CDS 277 376 . - 1 ID=cds.g3168.t1;Parent=g3168.t1;3_prime_partial=true #PROT g3168.t1 g3168 MAADDSLHARLFSLFEVDWRWRLDDSPEFETFVYGTHANDDKLDDRSLESFVRREQHSNNMLSRAREFDPAKLSADDRLNLSLFVDQHETYLRGLRFKPYLTPINFLEGPHIDLPQLVGWMRLETEAQLRACISRLRAFPRQVDQIIQLLDKGIEEGRTTPKAALKNVEASISVHADKPPRETVFFECFRKLPESIEGQVRMQLQREAEAAIAESVQPAFKKLRNYVANTYYPNARETIACIALPDGADHYAACLRFHTTTAMSAQAIHAVGVETVASIKREMEAIMDEVGFAGDDGSGGDADTRLAAFTKHLQADPSHFYVNGADLIEGYDRMCREKIEPLLPAFFGRLPRASYKIQSMPEHQAMGAPAAYYLSGSADGSRPGVFYVNSYNLAGCPQYEMVALSLHEAIPGHHLQGALALEGEGLPAFRTTIEDRRYHEAPGKFPMNTGYIEGWGLYSEYLGIEMGLYTDPYARFGRLCYAMLRATRLVVDTGMHALGWDRGRAIQLLSRNASMGLHEATMEIDRYIAWPGQACAYKIGDIKIRELRRRAEAALCTSN # ORIGINAL: g3169.t1 original gene structure, not modified by PASA NODE_1337_length_11983_cov_41.9825 AUGUSTUS gene 4406 10585 . + . ID=g3169;Name=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS mRNA 4406 10585 . + . ID=g3169.t1;Parent=g3169;Name=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS exon 4406 4426 . + . ID=g3169.t1.exon1;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS CDS 4406 4426 . + 0 ID=cds.g3169.t1;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS exon 4533 6575 . + . ID=g3169.t1.exon2;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS CDS 4533 6575 . + 0 ID=cds.g3169.t1;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS exon 6847 9957 . + . ID=g3169.t1.exon3;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS CDS 6847 9957 . + 0 ID=cds.g3169.t1;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS exon 10108 10233 . + . ID=g3169.t1.exon4;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS CDS 10108 10233 . + 0 ID=cds.g3169.t1;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS exon 10463 10585 . + . ID=g3169.t1.exon5;Parent=g3169.t1 NODE_1337_length_11983_cov_41.9825 AUGUSTUS CDS 10463 10585 . + 0 ID=cds.g3169.t1;Parent=g3169.t1 #PROT g3169.t1 g3169 MASASPSPPCSVCRRPAVYSAVYQGREDYFCSEECYKRLYTYLMQQAQQAEEQLGLSGHSHQLSNASIGPQSQSYASQYAQDATVASAQSYAPAASSYEQSQQQSQQQPTASNGAYTNNGYTISTKSFPRTTNSMPRLPQEKPIPPRQQAQTYASSGNVSGGGPFVGGGDPFAGVSIPARTQSLAQGIAQSDSFAESTQTSESRHHSISNGSTSDIAPFSPDMTSGTTAQAFPDQGLPGDARPSYLMDPDADPFADALDDYARQPAQSNLPPASDVHVEHSLPPQTVQTTPSTAMPQQQAIPEDKATQQVPAASENVPSRMASIGALAQTGLPSLSSPKASAAPSPKASAAPSPKASAAPTPKQTPPASVGSSPKAIAAQPEATEPTHTPLDQASSKSTSVSSTSAASSLTSVHASSEVSVHAPSEVSVHAPLQVSTVASPKPAVKVATVTAPAPAKKTSTATSSVVKPAQKLSTAGNQPPKKKESSAAPPKAKTEEKAVRTAVGASKAPPNARSTSTGTAPSAVAVPPATVTAAVPTTTSTKKSSQKPPAVPPPKNGAQAQLQQVLAQKAQRPPSPPWAGPPAHQQSAAAPTEVHSGHGAAATAAASVHSSQQPTHHHLVSNASAATAATAATAATSAVVGDLPAKENLFVSSTEEPQFIGVVAAEAIGTSAPGKRGSVPHIPYDLSWRETPVSPLEVEMLAHGSNMQGLFSACKTGNMQVVMRMTAVPNMDLNAFDGDGRSCLMLASMGGHAECAEALVLAGALTELCDKNGRTALHWGAHYGQKRSVTTLTRLGALVGAEDAQGKSPLHFAVDAPDSTDAIVELLAANARIDVQDDEGMTALMWAAYRGHDAHATVLLQRGSDALIRDVEGKAALHWTAANANARCARVIAEHSRASLEATDKAKRTPLHLAAGEGNAAVTDALLNMGASTVAKDELQRTPLHWATVCGRLQCIHLLVASKNRGGIDVADEHGANPLHYAAQQNHVECAKALIRAGANVECEDATGRVPLMWAATLGHGSVMTLLLDSGAKIGRKERQGLTALHCAAHAGVAPSLRLLVGKEADVEARDNKGHTAMFQAAHNGHIDCVSTLIDCKAKVDAVDPDGRTPLHWAASAGHAGVVRVLIRGGANMDLADKKGGTALHEACFHGKEAVVRELLSLGASCNAIDATGFTALHWAVVDGHTAIAKLLAEAGAAMSPRDRSPNGLTPLDFALTKGHTPCATFLRTRGALTSAELIESVAKLFQAVYRRRLARRKVVLKRQRSATVIQAHWKGYKARALLRRRKDMKQRLLESKRRKAAVVIQRQWRSFLRERFKQEVAEFAEMERLMMGKIALRNEERSQLIRLHEQEVEELRLRRQIVEAEKKKLELALEEQRAKERDAAEKELRGMRREQLKSMRSQTMPTTPQSPAVRLSLRKASNPVFLQQLPPPPQQEQQPQQQHQPQQPQRYAPVPPTPGTQVQQGFKETLVAQSFGVSVQTYASFGHPPPPHPAQTQQRRPRSAGGDTWNHDTRTRREGENVSESLPGGRSALVSRTMGTRKSLDATMLRTFREAVATADANKSRELEDKLVEKNRELRRLKEENKLLTTIQKRQERALLMLERKTGSVLDSIGTRSAGKVVAMSPEDLRSASASGHVTGRRSTSSGTVHVVQCEMDAQERRLLNDARQIQTTTIRQQESLLKSQQKQLLLFKDKYERLRGELETAKKTGVPRAGGISSTSGQAGAQGASGGEGNAEEFRRQIKQALDEVIRLRTQTESLHQIAKVRKPGDDAPPHNGNSASTATGRLVLPPAAGATPLSAPTAS* # ORIGINAL: g8293.t1 original gene structure, not modified by PASA NODE_3885_length_2570_cov_31.9992 AUGUSTUS gene 574 2371 . + . ID=g8293;Name=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS mRNA 574 2371 . + . ID=g8293.t1;Parent=g8293;Name=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS exon 574 1552 . + . ID=g8293.t1.exon1;Parent=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS CDS 574 1552 . + 0 ID=cds.g8293.t1;Parent=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS exon 1901 1999 . + . ID=g8293.t1.exon2;Parent=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS CDS 1901 1999 . + 2 ID=cds.g8293.t1;Parent=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS exon 2247 2371 . + . ID=g8293.t1.exon3;Parent=g8293.t1 NODE_3885_length_2570_cov_31.9992 AUGUSTUS CDS 2247 2371 . + 2 ID=cds.g8293.t1;Parent=g8293.t1 #PROT g8293.t1 g8293 MHSRGHSESHSRGNSESHSRTPSESAHGHTPHTPHATPTHPGGTDAPDSPLMSPSVDPRVFRLDFREALEDTPRYRKTLAKAEADCYELEETTKHLIALTQQYFDAGARFNQCGVALASEFENIAKRDLFSENKALQESVAKFAQCLYDIVEVRGNLLDQTKTTLSEPLQDFLGREIGEARQSKRAYDKLTKELDGARRKYNAVPRSKQEEFRDAGNMLHATRACFRHTALDHAFNLNCIEARKAFEIPEHIMQFMFTQYNFFQQGLAVFEDIVPRMREVATRLKEQRDEYESEKTAMESRHALVREEFPNAAAPELGKMTELTKEGYLNKHSSEDRMFKKWNRRYFFVKNGFLYYEKRGQTDKPPTAAVDLRLCTVKPANDAERRFCFELVTPKKAFLLQ # ORIGINAL: g11136.t1 original gene structure, not modified by PASA NODE_3362_length_3631_cov_28.5877 AUGUSTUS gene 1629 2478 . + . ID=g11136;Name=g11136.t1 NODE_3362_length_3631_cov_28.5877 AUGUSTUS mRNA 1629 2478 . + . ID=g11136.t1;Parent=g11136;Name=g11136.t1 NODE_3362_length_3631_cov_28.5877 AUGUSTUS exon 1629 1681 . + . ID=g11136.t1.exon1;Parent=g11136.t1 NODE_3362_length_3631_cov_28.5877 AUGUSTUS CDS 1629 1681 . + 0 ID=cds.g11136.t1;Parent=g11136.t1 NODE_3362_length_3631_cov_28.5877 AUGUSTUS exon 1797 2478 . + . ID=g11136.t1.exon2;Parent=g11136.t1 NODE_3362_length_3631_cov_28.5877 AUGUSTUS CDS 1797 2478 . + 1 ID=cds.g11136.t1;Parent=g11136.t1 #PROT g11136.t1 g11136 MATRPPVSFSSLPIEVLLAILGVGHIPRCRVGRHSTGATRLESVVDTDVSALGGVHSLDLTNCERGTDVSALGGVHFLDLSGCTKVTDVSALGGVHSLNLLYCYGVTDVFALGGVHSLNLTNCLGLTDVSALRGVHSLNISYCRRVTDVSALGGVHSLNLSYCERVTDVSALGGVHSLNLYGCVGVTDVSALGCVHSLDLSGCHWVTDDSALGGVHSLNLTNCNRVTDVSALGGVHSLNLIAKE* # PASA_UPDATE: g5145.t1, single gene model update, valid-1, status:[pasa:asmbl_5187,status:12], valid-1 NODE_288_length_27952_cov_40.6398 . gene 25480 27895 . - . ID=g5145;Name=g5145.t1 NODE_288_length_27952_cov_40.6398 . mRNA 25480 27895 . - . ID=g5145.t1;Parent=g5145;Name=g5145.t1 NODE_288_length_27952_cov_40.6398 . five_prime_UTR 27823 27895 . - . ID=g5145.t1.utr5p1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . exon 27782 27895 . - . ID=g5145.t1.exon1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . CDS 27782 27822 . - 0 ID=cds.g5145.t1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . exon 27003 27558 . - . ID=g5145.t1.exon2;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . CDS 27003 27558 . - 1 ID=cds.g5145.t1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . exon 26667 26825 . - . ID=g5145.t1.exon3;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . CDS 26667 26825 . - 0 ID=cds.g5145.t1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . exon 26271 26465 . - . ID=g5145.t1.exon4;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . CDS 26271 26465 . - 0 ID=cds.g5145.t1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . exon 25480 25969 . - . ID=g5145.t1.exon5;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . CDS 25853 25969 . - 0 ID=cds.g5145.t1;Parent=g5145.t1 NODE_288_length_27952_cov_40.6398 . three_prime_UTR 25480 25852 . - . ID=g5145.t1.utr3p1;Parent=g5145.t1 #PROT g5145.t1 g5145 MQAKLGDCNVAADLPDIKPHYPLSTLAAKAMVAAAAAASPSTSRFGTLKKGFATLRGFGSTKDLNKSSDAAASPAPVPTPAPAAAAPAESDMPPGFDPHKKSRLGTIKRFTMRKNKSLTNINDPSGGGEDDSSDMAKAAAAAAAAAAEPSSPAPSAGSASPSPQKKTQSRFGTLKAGTMNTLRRVASLSSLASEEPKEKDPWEGVDYRKLQAAVDNEWQSLAGKSAHDAMREYVVLTKASWPGFGSTMFDVENFTNKIWPKLLTLGINMEGVNVFKRDAESILFVSYMNIISFSAPNSHTYKLAVDDHEPLIFETKEVLAIAKLIKAYISEITRRMQQRQSTISSSSSYASSVAN* # PASA_UPDATE: g5144.t1, single gene model update, valid-1, status:[pasa:asmbl_5185,status:12],[pasa:asmbl_5190,status:13], valid-1 NODE_288_length_27952_cov_40.6398 . gene 15477 23935 . - . ID=g5144;Name=g5144.t1 NODE_288_length_27952_cov_40.6398 . mRNA 15477 23935 . - . ID=g5144.t1;Parent=g5144;Name=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 23794 23935 . - . ID=g5144.t1.exon1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 23794 23935 . - 0 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 23313 23438 . - . ID=g5144.t1.exon2;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 23313 23438 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 22863 23026 . - . ID=g5144.t1.exon3;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 22863 23026 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 22512 22722 . - . ID=g5144.t1.exon4;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 22512 22722 . - 0 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 22182 22298 . - . ID=g5144.t1.exon5;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 22182 22298 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 21515 21859 . - . ID=g5144.t1.exon6;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 21515 21859 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 20766 21343 . - . ID=g5144.t1.exon7;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 20766 21343 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 19590 20494 . - . ID=g5144.t1.exon8;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 19590 20494 . - 0 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 19125 19334 . - . ID=g5144.t1.exon9;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 19125 19334 . - 1 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 18689 18899 . - . ID=g5144.t1.exon10;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 18689 18899 . - 1 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 17510 18519 . - . ID=g5144.t1.exon11;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 17510 18519 . - 0 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 17094 17263 . - . ID=g5144.t1.exon12;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 17094 17263 . - 1 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . exon 15477 16960 . - . ID=g5144.t1.exon13;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . CDS 16089 16960 . - 2 ID=cds.g5144.t1;Parent=g5144.t1 NODE_288_length_27952_cov_40.6398 . three_prime_UTR 15477 16088 . - . ID=g5144.t1.utr3p1;Parent=g5144.t1 #PROT g5144.t1 g5144 MELMAFVPYRVRRRFAGKSSKPLTDPLLENFTGATVFIDISGFTALTARMASLGPSGIEQLCDYLNQYFTKMINIIEPMGGDVIKFAGDAIQVIWSHDPKSGVAYEHTICVACQCAFELTATLNRFQIDTDLVLSLHIGVGAGKLFGLHVGGVNGRWEYLIAGDAVNELKDTVDEAKMGEVAVSEGAWACAQKIFAGGKRGKAYVLSALTNRIPSDAMIPIPRPAAAVETQFLECVKSYIPAVVNARYIAKGMAFLAENRRLTVLFARIPSLTFTDAKSIDPAHKATVLVQQVVMRHEGTMHQFMVDDKGAVMLASFGLVAHENDAQWALKAALELKEGLTASYPDFSIGLTTGTVFAGAIGSPTRKAYTIIGDVVNMSARLMCHSLAARGVLCDAATQEASGESFRFRRHEPISVKGRDTPMLVYTPVGVRQWQSVTRKQSRRQQLNGPLIDKIDDAVTSSDAPPMASGVRRGSLRGARSTINIGAAPKKRQTAFVGRREELGKVKRSLDSVKLQKACVMLLEGDAGMGKSAMVDVVCRNAANEGFDVLRAGALDIERGTPFYVWCEIMLQMCDLVGGPLAGRRRATVTGRSLASESMFSVATTTSGDFSGRSSMVFGGGDLKGSELVDYVHRLVEEYDDLAPLLPLLNALLPMNLPETDATREMAGSLRMSQLFYLIGELIQRRALTKPIALVIDDAHWIDSASWALTCHIAELAIPGLLLGVMSRPLALEYGTNIPAEWTKIRELPHTQHLPLEGLPIIEIRQLVASCLGADDCAVEVAEYIEGKSRGNPLFVEQLVDILKNMGHVDVVGGMCMLRATGVDAKNLELEVPNSMKGIITGRFDRLPLPQQSILKTASVIGRLFPINLLWEVMRLSDASLSESDLEAAITEIDMVVEVDTAVEFSFMFSSDVFRDVVYSLLTKTQAADLHKRVAGFLEMNESPNWAIIAFHWSKTRKIARTIEANEMAAKAAFDGFAVREAISHYETALAIVNDSKHVRASMTPQKGREAIPPDEQLPPVGRDRIMLWISMLGRCHVMITEFKRADEYFRIAFEHYGERLPQTTFKKILGILKQIRLQKKFKKERQKVESDRIRRASQAALVSPVEGISAELVLSAGRSRPPLILKKRSSKGLILKKSAVRPMDISEAQGEGGKGDEKRENESPSPVAEKKKKKAKKMETDAAPASSTTTTTTTTTTTATSTTTTSTPAKEAEEKEPPRDKDTRESFIVKSTPRAPTMTPPVTSTLAPDGTHMGLFLGRMLIRQQEVCFFLNDRFGYAYTTLRAMNLLEALRPEIHGELALCYAKWAFMMSAKKKKKVADEYIRMAIDVKDNTDIEPAMELYTLLFHCLYFAGRSKFDAVGVLTERINHLSQQLGDCFRRAQCFCTIGYSCYFPQDEIVRCSDVMNEIYSKARLCGDIQTIVWTVGIGAFMHLTLADRVSWSHRLQEDTVAMAKKRLDPKKDQATLVLLLGGYAQALVRVDKSFDRIVAPMLEVLTMSQEVNPPNFLPFPGLAAVIFALCEFEMTRGKELDEVKGRRALVVKIAKGCLKAAKRFISMFDLPREMFPLLKAMLCLLRRDVTEASDKAKALLADLEARVTAPMSYLRAWAHAIIGWVGMRRRQGKGFLCFGGGRHSDAGDAHPDETKERYRRACELYGKCHASYEPKALGLQLDGHADKIASVDSGI* # PASA_UPDATE: g5142.t1, single gene model update, valid-1, status:[pasa:asmbl_5191,status:12], valid-1 NODE_288_length_27952_cov_40.6398 . gene 2094 7389 . + . ID=g5142;Name=g5142.t1 NODE_288_length_27952_cov_40.6398 . mRNA 2094 7389 . + . ID=g5142.t1;Parent=g5142;Name=g5142.t1 NODE_288_length_27952_cov_40.6398 . five_prime_UTR 2094 2375 . + . ID=g5142.t1.utr5p1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 2094 2483 . + . ID=g5142.t1.exon1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 2376 2483 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 2818 2935 . + . ID=g5142.t1.exon2;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 2818 2935 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 3086 3228 . + . ID=g5142.t1.exon3;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 3086 3228 . + 2 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 3870 3988 . + . ID=g5142.t1.exon4;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 3870 3988 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 4621 4723 . + . ID=g5142.t1.exon5;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 4621 4723 . + 1 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 5177 5562 . + . ID=g5142.t1.exon6;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 5177 5562 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 5827 5953 . + . ID=g5142.t1.exon7;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 5827 5953 . + 1 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 6196 6309 . + . ID=g5142.t1.exon8;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 6196 6309 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 6606 6745 . + . ID=g5142.t1.exon9;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 6606 6745 . + 0 ID=cds.g5142.t1;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . exon 7203 7389 . + . ID=g5142.t1.exon10;Parent=g5142.t1 NODE_288_length_27952_cov_40.6398 . CDS 7203 7389 . + 1 ID=cds.g5142.t1;Parent=g5142.t1 #PROT g5142.t1 g5142 MDNEADTCCVCLKETNKNGSALIECAGDDCEVILHPECYGIVGKLPEKWMCMPCEEGYAGRKQIKCGICSNHSRKAAYKKSVSGVWTHVLCALWTPGVCFKDPVRLTGMSYDKVNAGAGQFQETCYICQYRGSIEKAVYGLKMPCETPGCVNKLHAFCGVRFRLLHSDDKRHWGYCEDHDPEIERRLVPSGKRVQEKADTDKKKKKTEKEREKSPPSVRDVKHEVKKRGGEGRDSNPGNDKGEEKTTPPRASVEGPTVGRKRKAESEPAENGKGGSGDATKGSSLTSESKKAIGSAVAATAAVGTDGRASKKQKVAAKNGGDAADTVMVAAPDNELNEKAVESFLDTEKLELRRFLQSTALATPRGLEAVLPYIAQLKQQNDELAGKLRSLIKERDDLTVRRDELQGQLATTDDAEATTTDHLTRLRRALLSLFGVMRPADVPRDLDASSVDRLLRDLAHAVETSDEGMKEALFSRTLREYKEKNAPPAPPPQEQQQQQQPLPSAPLMPQPTQQ* # PASA_UPDATE: g5143.t1, single gene model update, valid-1, status:[pasa:asmbl_5192,status:3], valid-1 NODE_288_length_27952_cov_40.6398 . gene 10994 12727 . + . ID=g5143;Name=g5143.t1 NODE_288_length_27952_cov_40.6398 . mRNA 10994 12727 . + . ID=g5143.t1;Parent=g5143;Name=g5143.t1 NODE_288_length_27952_cov_40.6398 . five_prime_UTR 10994 11131 . + . ID=g5143.t1.utr5p1;Parent=g5143.t1 NODE_288_length_27952_cov_40.6398 . exon 10994 11537 . + . ID=g5143.t1.exon1;Parent=g5143.t1 NODE_288_length_27952_cov_40.6398 . CDS 11132 11537 . + 0 ID=cds.g5143.t1;Parent=g5143.t1 NODE_288_length_27952_cov_40.6398 . exon 11659 12727 . + . ID=g5143.t1.exon2;Parent=g5143.t1 NODE_288_length_27952_cov_40.6398 . CDS 11659 12437 . + 2 ID=cds.g5143.t1;Parent=g5143.t1 NODE_288_length_27952_cov_40.6398 . three_prime_UTR 12438 12727 . + . ID=g5143.t1.utr3p1;Parent=g5143.t1 #PROT g5143.t1 g5143 MANPHAVDSLWGDDKRQLKAPSSPSQRRFVSPRRPSASSPPANGETADAPSSFVVYVTTPSSPQPLSVTVRGSDTVRELKSAVFEATSLAPGSQQLLFNGIDMDAAKNALGQSMTLAEMRLCAGSTVRVVPRLSSGADTKTAPATIATSDIAQAVRQLSVKQLAALVTGREPVVLMARIGNQRIAVQIRLVPDSVIGNGSSQPGAATSIARASPGVAGNSPNSIINNAPANAPISHPANYHQGQPQTIPVMRAPTSHPLLSDAMDVDSVCESRAEQDRLRATITNLRQRMATNAHPAARRDPITTVVSGRVEKKTSAPSVLGASAPANSKTGDCATCSKKLNSVLRFKCRCGGEYCGSHKHAEDHACTFDYKSHGRQQLADMNPTVCASKINYL* # ORIGINAL: g5141.t1 original gene structure, not modified by PASA NODE_288_length_27952_cov_40.6398 AUGUSTUS gene 800 1309 . - . ID=g5141;Name=g5141.t1 NODE_288_length_27952_cov_40.6398 AUGUSTUS mRNA 800 1309 . - . ID=g5141.t1;Parent=g5141;Name=g5141.t1 NODE_288_length_27952_cov_40.6398 AUGUSTUS exon 1300 1309 . - . ID=g5141.t1.exon1;Parent=g5141.t1 NODE_288_length_27952_cov_40.6398 AUGUSTUS CDS 1300 1309 . - 0 ID=cds.g5141.t1;Parent=g5141.t1 NODE_288_length_27952_cov_40.6398 AUGUSTUS exon 800 1053 . - . ID=g5141.t1.exon2;Parent=g5141.t1 NODE_288_length_27952_cov_40.6398 AUGUSTUS CDS 800 1053 . - 2 ID=cds.g5141.t1;Parent=g5141.t1 #PROT g5141.t1 g5141 MTKADSSSAGASTAAPLRTVSKRRPPTTLEHFAGGTVGGMMGVIASYPLDTVKVRIQTQGNPPIYTGMVDCFRQMVRKEGVRASLSL* # PASA_UPDATE: g13806.t1, single gene model update, valid-1, status:[pasa:asmbl_2853,status:12], valid-1 NODE_1868_length_8823_cov_52.5829 . gene 2688 4347 . + . ID=g13806;Name=g13806.t1 NODE_1868_length_8823_cov_52.5829 . mRNA 2688 4347 . + . ID=g13806.t1;Parent=g13806;Name=g13806.t1 NODE_1868_length_8823_cov_52.5829 . exon 2688 3094 . + . ID=g13806.t1.exon1;Parent=g13806.t1 NODE_1868_length_8823_cov_52.5829 . CDS 2688 3094 . + 0 ID=cds.g13806.t1;Parent=g13806.t1 NODE_1868_length_8823_cov_52.5829 . exon 3249 4347 . + . ID=g13806.t1.exon2;Parent=g13806.t1 NODE_1868_length_8823_cov_52.5829 . CDS 3249 3996 . + 1 ID=cds.g13806.t1;Parent=g13806.t1 NODE_1868_length_8823_cov_52.5829 . three_prime_UTR 3997 4347 . + . ID=g13806.t1.utr3p1;Parent=g13806.t1 #PROT g13806.t1 g13806 MARLIFSQTPCITVNSEDNAIIAGNFGEVAFTPDFPFRDGLVLEIVAVRNAAGSATPVEHQTRRRRSEHEPLVHGVTLWQVTFVRKANTGGVDEYELQVRRCANCTKHEECSGELKFIGKPKNQKSFRGQKLRDGSFIPSQDNLGFRCFCTSSVRKGHHRADSYAWCQQRGDAKIVLSNAFTIKGRPTGSKKLRNGDSAAATVDDSRPGSACDVFVRPNAPVSPAPTPRRPSTCSSRASECSDSEAEELRNYYGHHRAQYYYHGPGMYGHGSMAMGYAPLPTPPPQSPRTSSGFTPFQVAPSMNLPATGAYHHLPHNQGYVQMRCDDVHSKQMQHLHHHQQQQQPQQQQQQQQQQQQSFRCKRKLEAEESEMNAAHALLAMKSS* # ORIGINAL: g13807.t1 original gene structure, not modified by PASA NODE_1868_length_8823_cov_52.5829 AUGUSTUS gene 4611 5207 . - . ID=g13807;Name=g13807.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS mRNA 4611 5207 . - . ID=g13807.t1;Parent=g13807;Name=g13807.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS exon 4611 5207 . - . ID=g13807.t1.exon1;Parent=g13807.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS CDS 4611 5207 . - 0 ID=cds.g13807.t1;Parent=g13807.t1 #PROT g13807.t1 g13807 MMWMVEPLLVILVAVTLWRLSQHGVDSITRRRIDRSTPIYDIVHESSLSRYTCEMFKRHPLVLRVAVAVSAALIDAGVIGAVFTEKYHDLWALSLALGLRQLCLITTSLPKPPGMVWTNPKVPSLMVIYSKEASSFYISGHTIASLFLGNALVDVLGAPIVLVCCAYQISLVLLTRAHYTMDVIGAITAVLAVRACVC* # ORIGINAL: g13808.t1 original gene structure, not modified by PASA NODE_1868_length_8823_cov_52.5829 AUGUSTUS gene 6528 8376 . + . ID=g13808;Name=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS mRNA 6528 8376 . + . ID=g13808.t1;Parent=g13808;Name=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS exon 6528 6619 . + . ID=g13808.t1.exon1;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS CDS 6528 6619 . + 0 ID=cds.g13808.t1;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS exon 6871 7043 . + . ID=g13808.t1.exon2;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS CDS 6871 7043 . + 1 ID=cds.g13808.t1;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS exon 7338 7533 . + . ID=g13808.t1.exon3;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS CDS 7338 7533 . + 2 ID=cds.g13808.t1;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS exon 7860 8376 . + . ID=g13808.t1.exon4;Parent=g13808.t1 NODE_1868_length_8823_cov_52.5829 AUGUSTUS CDS 7860 8376 . + 1 ID=cds.g13808.t1;Parent=g13808.t1 #PROT g13808.t1 g13808 MEEGIRRTRAGTVVEGEPSVTYGNLIVFAICINYMIGTGVFSLPAAFYASGIPVMGALLCMGAFVSLIAAYYTLESMARMDGVENMIESSSTPSSSTESLPDELTSPLAGHHYPSKPLHEITFRKYNMVNICERFGGAWGKWFMEVTITLYCWGVMWAYVASFSTTMTTIYFLYFKTDEGTCDPFGSHPSTACKNAYYICAVIFAALVIPLTMIDLQHQRHVQLALATYRMVAFMVMLGTCARGLAGSGSLARDNFNEEIRPDFSGFATSFTSTIVALNFQKNLPDILHPSVDKLGAKRIVSIAVLFTLAFYIVVGVIAAVGNAT* # ORIGINAL: g7488.t1 original gene structure, not modified by PASA NODE_3506_length_3319_cov_22.3628 AUGUSTUS gene 747 1563 . + . ID=g7488;Name=g7488.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS mRNA 747 1563 . + . ID=g7488.t1;Parent=g7488;Name=g7488.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 747 846 . + . ID=g7488.t1.exon1;Parent=g7488.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 747 846 . + 0 ID=cds.g7488.t1;Parent=g7488.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 1019 1563 . + . ID=g7488.t1.exon2;Parent=g7488.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 1019 1563 . + 2 ID=cds.g7488.t1;Parent=g7488.t1 #PROT g7488.t1 g7488 MLYLSVAKSNVEAIACTAESKNTEGASAREFVVSRAAHPRHATDNSDELWSGQVFTAPVALFLTYNGDEVRSRGFELYLSGEPATFATSEPVSFLTLSVPVTVSATETKIDVVEQRTLTDLLARVFSFIGAIGTASALVIAIAFKWPTACAWAVGKCIRPMCQRVPDGAQWMWRRAESGVDCICRCSRTYRRASVDEESAEQSAHSDELTPLTH* # ORIGINAL: g7487.t1 original gene structure, not modified by PASA NODE_3506_length_3319_cov_22.3628 AUGUSTUS gene 1 682 . - . ID=g7487;Name=g7487.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS mRNA 1 682 . - . ID=g7487.t1;Parent=g7487;Name=g7487.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 1 682 . - . ID=g7487.t1.exon1;Parent=g7487.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 1 682 . - 0 ID=cds.g7487.t1;Parent=g7487.t1 #PROT g7487.t1 g7487 MATTPAIVNRSVTLRGHTNAVIALVFSSDGRTVATGSYDSTARVWDVLTGRCIFTLSGHSLAVWSVAFSPDGRTVATASWDKTARVWDAATGQCKLTLSGHSKEVTSVAFSPDGQTVATGGGDGIVRLWNAATGQCKLTLSGHSDWVYFAEFSADGRMIATGSGDNTARVWDEAAGQCKLTLSGHSHWVFSAAFSADGRTIETRSADNTVFVWDLATGNEIEMRRET # ORIGINAL: g7489.t1 original gene structure, not modified by PASA NODE_3506_length_3319_cov_22.3628 AUGUSTUS gene 2338 3139 . - . ID=g7489;Name=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS mRNA 2338 3139 . - . ID=g7489.t1;Parent=g7489;Name=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 3035 3139 . - . ID=g7489.t1.exon1;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 3035 3139 . - 0 ID=cds.g7489.t1;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 2723 2835 . - . ID=g7489.t1.exon2;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 2723 2835 . - 0 ID=cds.g7489.t1;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 2498 2576 . - . ID=g7489.t1.exon3;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 2498 2576 . - 1 ID=cds.g7489.t1;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS exon 2338 2370 . - . ID=g7489.t1.exon4;Parent=g7489.t1 NODE_3506_length_3319_cov_22.3628 AUGUSTUS CDS 2338 2370 . - 0 ID=cds.g7489.t1;Parent=g7489.t1 #PROT g7489.t1 g7489 MNNIQKLFSERVEVFGPVEFTRNSIVTGIIKIGLKTFFESIRLRTFNKYGYQQVQVDVQYLKAKLHKYAEDEGAVASLLEEVVSSTINRCLDPSPMDPAAIDNVVAKEP* # PASA_UPDATE: g9344.t1, single gene model update, valid-1, status:[pasa:asmbl_8215,status:12], valid-1 NODE_5656_length_766_cov_30.1042 . gene 234 685 . - . ID=g9344;Name=g9344.t1 NODE_5656_length_766_cov_30.1042 . mRNA 234 685 . - . ID=g9344.t1;Parent=g9344;Name=g9344.t1 NODE_5656_length_766_cov_30.1042 . five_prime_UTR 678 685 . - . ID=g9344.t1.utr5p1;Parent=g9344.t1 NODE_5656_length_766_cov_30.1042 . exon 234 685 . - . ID=g9344.t1.exon1;Parent=g9344.t1 NODE_5656_length_766_cov_30.1042 . CDS 234 677 . - 0 ID=cds.g9344.t1;Parent=g9344.t1 #PROT g9344.t1 g9344 MKDGDELGTVLEIIAEVLRTVNTTNKADIASVLHLLRPLTQNCMAVSGGNALSGQLASALIGCLHIVHTSGEFEGYVAGLPQDELADYLNESFVVFHLLSTVEVYPRDWLMMGLRQSVVIFQVLGALTPSLKEVGLIGIIVPWERIP* # ORIGINAL: g9689.t1 original gene structure, not modified by PASA NODE_2114_length_7663_cov_63.6596 AUGUSTUS gene 3887 6643 . + . ID=g9689;Name=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS mRNA 3887 6643 . + . ID=g9689.t1;Parent=g9689;Name=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 3887 3970 . + . ID=g9689.t1.exon1;Parent=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 3887 3970 . + 0 ID=cds.g9689.t1;Parent=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 4317 4454 . + . ID=g9689.t1.exon2;Parent=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 4317 4454 . + 0 ID=cds.g9689.t1;Parent=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 4694 6643 . + . ID=g9689.t1.exon3;Parent=g9689.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 4694 6643 . + 0 ID=cds.g9689.t1;Parent=g9689.t1 #PROT g9689.t1 g9689 MAHASRIVIHLDLDCFYCQVEEKRLGLLGSGIPLAVQQWNGLIAINYAARERGVSKRHVSPEDARKVCPEIKLVHVATYADGDEDAKYHDNPSRRTHKVSLDAYRNASLDIFRVISRFAPSCEKGGMDEAYIDATQIVADRLKARKNSGRAGQWAAGDAIGDGDGMVCDVDEDGDSDRGACAGGGGGHPRILDWASLGVTLIDGSRPAVAHAADSADAPQPTPPPRFECDSLFIPSSATLAQLFEAARYCEEIRSAIKAELGFTCSAGISHCKMLAKLGSSLHKPSKAVVIAPTGVAQLLHALPLAKIKSLGGKMGTVVQEKLGVQTAGACWPFTRPQLHRTLGEEVGDWLYGAVRGIDGCEVVARVQTKSMLAAKSFDTVRETAGLKHWLGILAVELASRMRNDVTGRAPRTLTVGFSRPMTSYGDHRSKSCALPPNRFDPGALADAAMGMLLLLPTEEYLPCSRLSLGLSGFGEAPVDEKRSIRGFFSRAAAKNAVPRQRHAVDAVGTDGTEGADFDSDSDAHCDPHDDPHSDGGQSPMSSPMKFVRNDRDNNSANALYAVSDEDTGDRQGTRAGRAGACIDRFVRRGVARDVADPPLCVRSAGDQATSMRAAAEHDRHKTGPASSIGGVAVVAGFHCDRCDRSVTHEDPDVHADFHYAFDLQRAERGGPPAQAHPGVQGASTTTEHPKHAKRRLGDGDKGRGTDPKVRRLDAFFSVSKAV* # ORIGINAL: g9688.t1 original gene structure, not modified by PASA NODE_2114_length_7663_cov_63.6596 AUGUSTUS gene 149 2045 . - . ID=g9688;Name=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS mRNA 149 2045 . - . ID=g9688.t1;Parent=g9688;Name=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 1998 2045 . - . ID=g9688.t1.exon1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 1998 2045 . - 0 ID=cds.g9688.t1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 1603 1683 . - . ID=g9688.t1.exon2;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 1603 1683 . - 0 ID=cds.g9688.t1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 1301 1404 . - . ID=g9688.t1.exon3;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 1301 1404 . - 0 ID=cds.g9688.t1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 899 1044 . - . ID=g9688.t1.exon4;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 899 1044 . - 1 ID=cds.g9688.t1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 553 639 . - . ID=g9688.t1.exon5;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 553 639 . - 2 ID=cds.g9688.t1;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS exon 149 246 . - . ID=g9688.t1.exon6;Parent=g9688.t1 NODE_2114_length_7663_cov_63.6596 AUGUSTUS CDS 149 246 . - 2 ID=cds.g9688.t1;Parent=g9688.t1 #PROT g9688.t1 g9688 MTANGDGVADSLAELQTRLLFGIPKKGRLYEQCIKLLAHIDVQYQRKNRLDIALGTNMNIALVFLPASDIALYVGQGRVDIGITGRDMIAEKEVTVDELLPLGFGKCRLCVQAPIANGIKDVKSLAGKRIVTSFPHLAAKYFKQIAPDVETPINYVSGSVEAACSLGLADAIVDLVETGETMRAAGLE # ORIGINAL: g3091.t1 original gene structure, not modified by PASA NODE_4254_length_1925_cov_64.4708_potentialcontaminant AUGUSTUS gene 1358 1798 . - . ID=g3091;Name=g3091.t1 NODE_4254_length_1925_cov_64.4708_potentialcontaminant AUGUSTUS mRNA 1358 1798 . - . ID=g3091.t1;Parent=g3091;Name=g3091.t1 NODE_4254_length_1925_cov_64.4708_potentialcontaminant AUGUSTUS exon 1358 1798 . - . ID=g3091.t1.exon1;Parent=g3091.t1 NODE_4254_length_1925_cov_64.4708_potentialcontaminant AUGUSTUS CDS 1358 1798 . - 0 ID=cds.g3091.t1;Parent=g3091.t1 #PROT g3091.t1 g3091 MLEVLRAARDHYLAENNLTGWEDDACLFQEKVLTCEGQGEDASRAFSNFKTEQSRKFRGHTNVDFDGYVPFTYDPRMDRKKPEDVVHLNFSNTSGNMVVNPQAMQTGGCQQEHFHAEHASKLLQVGGCNDRMNRQARTAAPPRHIV* # ORIGINAL: g3025.t1 original gene structure, not modified by PASA NODE_17542_length_225_cov_133.073_potentialcontaminant AUGUSTUS gene 2 105 . + . ID=g3025;Name=g3025.t1 NODE_17542_length_225_cov_133.073_potentialcontaminant AUGUSTUS mRNA 2 105 . + . ID=g3025.t1;Parent=g3025;Name=g3025.t1 NODE_17542_length_225_cov_133.073_potentialcontaminant AUGUSTUS exon 2 105 . + . ID=g3025.t1.exon1;Parent=g3025.t1 NODE_17542_length_225_cov_133.073_potentialcontaminant AUGUSTUS CDS 2 105 . + 2 ID=cds.g3025.t1;Parent=g3025.t1 #PROT g3025.t1 g3025 RRRSICRRRRSCAQRRSWCCARRSVCVKVRVGHV # PASA_UPDATE: g283.t1, single gene model update, valid-1, status:[pasa:asmbl_3917,status:12], valid-1 NODE_2275_length_6951_cov_44.6736 . gene 120 1856 . + . ID=g283;Name=g283.t1 NODE_2275_length_6951_cov_44.6736 . mRNA 120 1856 . + . ID=g283.t1;Parent=g283;Name=g283.t1 NODE_2275_length_6951_cov_44.6736 . five_prime_UTR 120 121 . + . ID=g283.t1.utr5p1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . exon 120 222 . + . ID=g283.t1.exon1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . CDS 122 222 . + 0 ID=cds.g283.t1;Parent=g283.t1;5_prime_partial=true NODE_2275_length_6951_cov_44.6736 . exon 400 691 . + . ID=g283.t1.exon2;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . CDS 400 691 . + 1 ID=cds.g283.t1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . exon 775 903 . + . ID=g283.t1.exon3;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . CDS 775 903 . + 0 ID=cds.g283.t1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . exon 1086 1304 . + . ID=g283.t1.exon4;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . CDS 1086 1304 . + 0 ID=cds.g283.t1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . exon 1450 1856 . + . ID=g283.t1.exon5;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . CDS 1450 1806 . + 0 ID=cds.g283.t1;Parent=g283.t1 NODE_2275_length_6951_cov_44.6736 . three_prime_UTR 1807 1856 . + . ID=g283.t1.utr3p1;Parent=g283.t1 #PROT g283.t1 g283 GNIGGLQSDEFHILSSTGEDTLLTCARCGYAANREVGEEGYHLDPYAKAGADPLTGLNITTSAVLVRSKNGGNPFYVPLMHREERPPTEIKLKREATRLELEYSGTIVTGQRAIEVVREDADKRAQVAGIKASEMKTPLLMERQIAMRPNVADILSKKFVGDTGVALVDNAIKMVDSGEAKEGDPCPMCDAHLGEEKGIEIGHAFVLGTKYSAPLKATISTKDGTTHPIEMGCYGLGVSRMLAGVVETHRDSKGIVWPESIAPYRMCIVTMHVEPPGSDEQLYALAEDLYDRLDALPGFTNEIVLDTRDLRPGQKLSQMSLVGYPWCVIVGSRTLSEGTVEVEYRITGEKKTMPLEQLVAHFTAL* # ORIGINAL: g284.t1 original gene structure, not modified by PASA NODE_2275_length_6951_cov_44.6736 AUGUSTUS gene 2377 4662 . - . ID=g284;Name=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS mRNA 2377 4662 . - . ID=g284.t1;Parent=g284;Name=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS exon 4552 4662 . - . ID=g284.t1.exon1;Parent=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS CDS 4552 4662 . - 0 ID=cds.g284.t1;Parent=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS exon 2741 4415 . - . ID=g284.t1.exon2;Parent=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS CDS 2741 4415 . - 0 ID=cds.g284.t1;Parent=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS exon 2377 2405 . - . ID=g284.t1.exon3;Parent=g284.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS CDS 2377 2405 . - 2 ID=cds.g284.t1;Parent=g284.t1 #PROT g284.t1 g284 MCAATAVKECLALVRFIRSAEDDFHVCGFYFNDFFVKDLWSALPLEWRDAFDSPSVTDHDCLLVAHSTVPPAHASSWPLSLVSFIREASSLSLLCETPNSVQQTVSHVSDQHQSTADASRDAPLQHAGANNIRRRTDSWRTDIPSVTGVHAEGMSAKKRHEVAVLASVIASVARDVGVTTALDVGSGTGYLSHYLSDVFGLDVVSVDCSEGGTHNNVKRGHRIREASNGCDKTKRKGRVVPVTSFVNEESMASPAIVRAFAALQEREYGEDQKYDGEDKDGDEVRRQTLPLHEGHFCSELFGNCPSAEFAQPRDMQPHDVVDGGFVLCGLHACGDLSAAMIRMFASSRSRPSSSTQLRHCQTGVRPAAVVSVSCCYNLLTERECTADTANTPTLTTSAATPTTTHTCSHSAPAAEATHTFGFPLSTALTEAGVRLGYDTRNLGCRALPSGSGGVDALAMIARRQLFRAALESVLVTDHPHRDRTKKLPRFSDSKLSDFNTYATFALSGLGIDCISAMSIRLPEGVSVDHVAKRRVMALWALGACVGTVVESLFLADRRLYLLEMEIADAHVIPLFDRAISPRNMAVIARGDAGYEGNKQNAQQG* # ORIGINAL: g285.t1 original gene structure, not modified by PASA NODE_2275_length_6951_cov_44.6736 AUGUSTUS gene 5440 6483 . + . ID=g285;Name=g285.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS mRNA 5440 6483 . + . ID=g285.t1;Parent=g285;Name=g285.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS exon 5440 6483 . + . ID=g285.t1.exon1;Parent=g285.t1 NODE_2275_length_6951_cov_44.6736 AUGUSTUS CDS 5440 6483 . + 0 ID=cds.g285.t1;Parent=g285.t1 #PROT g285.t1 g285 MASTMNAVAIRNYGSADKLEAVVVPVPTPGAHDILVKVAAVSVNPVDRKKRQNFGAEFDASTPFEQPLILGWDASGTVTAVGSEVSLFAVGDEVFFAGSLIRPGSNAEYTLVDERIAAKKPKSLSHADAAAIPLVALTAWEALVDGMGIPIPSEHSAPKRTKSILVIAGAGGVGSFAIQIAKRILGLRVIATASRPESRKFCIDNGADDVISHAAPLAEGLKSIGLTGVDYIFCTAGIADYIDQAVDIANPSGKIAAIDDDNLKPFDLSRLKLKRLTFHFELMFTRPIFGYELERQNEILSEISRLLDAGVLKTTLTKTYTFSAENLRQAHLDIESNRTIGKIALTL* # ORIGINAL: g6878.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 15636 24576 . - . ID=g6878;Name=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 15636 24576 . - . ID=g6878.t1;Parent=g6878;Name=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 24405 24576 . - . ID=g6878.t1.exon1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 24405 24576 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 24114 24269 . - . ID=g6878.t1.exon2;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 24114 24269 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 23830 24014 . - . ID=g6878.t1.exon3;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 23830 24014 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 23506 23710 . - . ID=g6878.t1.exon4;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 23506 23710 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 23124 23377 . - . ID=g6878.t1.exon5;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 23124 23377 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 22724 22949 . - . ID=g6878.t1.exon6;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 22724 22949 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 22394 22546 . - . ID=g6878.t1.exon7;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 22394 22546 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 22086 22232 . - . ID=g6878.t1.exon8;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 22086 22232 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 21850 21988 . - . ID=g6878.t1.exon9;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 21850 21988 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 21524 21699 . - . ID=g6878.t1.exon10;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 21524 21699 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 21308 21392 . - . ID=g6878.t1.exon11;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 21308 21392 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 20838 21169 . - . ID=g6878.t1.exon12;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 20838 21169 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 20519 20677 . - . ID=g6878.t1.exon13;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 20519 20677 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 20221 20253 . - . ID=g6878.t1.exon14;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 20221 20253 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 19794 20010 . - . ID=g6878.t1.exon15;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 19794 20010 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 19210 19296 . - . ID=g6878.t1.exon16;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 19210 19296 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 18923 18996 . - . ID=g6878.t1.exon17;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 18923 18996 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 18558 18717 . - . ID=g6878.t1.exon18;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 18558 18717 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 18275 18309 . - . ID=g6878.t1.exon19;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 18275 18309 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 17822 18054 . - . ID=g6878.t1.exon20;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 17822 18054 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 17503 17682 . - . ID=g6878.t1.exon21;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 17503 17682 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 17058 17242 . - . ID=g6878.t1.exon22;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 17058 17242 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 16713 16830 . - . ID=g6878.t1.exon23;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 16713 16830 . - 1 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 16306 16450 . - . ID=g6878.t1.exon24;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 16306 16450 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 16092 16190 . - . ID=g6878.t1.exon25;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 16092 16190 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 15854 15945 . - . ID=g6878.t1.exon26;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 15854 15945 . - 2 ID=cds.g6878.t1;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 15636 15743 . - . ID=g6878.t1.exon27;Parent=g6878.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 15636 15743 . - 0 ID=cds.g6878.t1;Parent=g6878.t1 #PROT g6878.t1 g6878 MASHCCHANPIHNVRDSHRCQRHVRATLLTVAIVALLASAATAATATLRVALLGHGDGTVAPNGFEEQAIRGCKLAANSFYGPGVEYENSMCHYFATNAELAPVTKLVAMACPLSPPATDSSFDHFVALGFDFEGIIASVADLYPNKTFSLVDSAYTNNLNVQGIVFAEDQAGYLAGVAAGLLTTTKRVCAVAGLPLAPVKRFRNGFIAGVRSQCADCIVHGPYVPSFINETMGRLAGEDAVQRLGCDVVFGCGGQMGSAAILRAASLSALVIGVDIDESTTTFANQTDAVSQMIVTSALKRVDNAVYSSLKARLDGSFAAGTKLLDARVNGIQLAKCSGVRACDLLQATLPPSAGSGNCSAAIMTRDKVLSDAYEAFLRNRAATGVGTDGDFSSLSTIESGTWVRVVAHGDGPGALASLGMAATSRGTIVVVGGEASQGIVGDAFVLDWGDSEWRRVSGPAPSARKDHSAVGFRDSVVVFGGVDFAAVVVDEVWRLNTTKDAWARDPPAAPRPQARSQHAAAVDGRKMYIFGGTKADLSITNDLWEYDLVALTWRLLDSDVTSVANRPSPRRGAAMAVLAGKLLLHGGETRDGLSSRMYAYDIAGRTWTVVVPSNGAAMPPTADHRAVAIDKDRLLFVGGRNRAGVSGAVVAYDAALNAYATDALGPLPAAASSAGVVVLPPPSAVDGMCEYTFNPQIVLCNVAESRRPVVVFGGALPGRDMILAYARDRPVSPTGQSLGASGGSSVALIAGLSCGMASIAIVAGVAIALRWKRNRFERALANLEWKVNYKDIDFGADSMADRFKKSYSVIGIVAPSCDLDSDDDDDPNPLGESARSMDNMIATNRKKSLSTESLAMQRRHRIASIAPGVARKGKCAVWRGRNVHVKILRKRSVELDRALRIEIKHIRDCMHTNLTRFIGASIDPPRVAILSEYCPRGSLEDILHNPKHNLDWVFRYSLATDAARGMEYLHTTPILFHGRLKAANCVVDSRWTLKITDFGLRGLRRDDTTTSRSSIGRVFGPEDLYNAPELVVLPFSGGTVKGDVYSYGILLQHIITREPPYAETNAPAESLIARIITENLRPVVMDDVPAGLSALMARCWEAAADARPSFEQVVLSIVAANPSMLTNVFDHCAQMLETYANHLEALVDERTSQLAEEQKRSQNLLYSMLPPAVVKSLMAGKKVNAESFDSVTIFFSDIVGFTKIASLSTPMQIVDLLNDLYTCFDSIIDSFDVYKASGLPMRNGNKHAGEIATMALDLLSAMTDFRIRHMQETQLQLRIGMHSGNVVAGVVGLKMPRYCLFGDTVNTASRMESGGLALRIHMSASTQVLLEELGGYQLELRGQLEVKGKGLMCTYWLLGKIGFEKPLPALDKAAAVADHDFK* # ORIGINAL: g6874.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 5800 7945 . - . ID=g6874;Name=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 5800 7945 . - . ID=g6874.t1;Parent=g6874;Name=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 7871 7945 . - . ID=g6874.t1.exon1;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 7871 7945 . - 0 ID=cds.g6874.t1;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 7678 7787 . - . ID=g6874.t1.exon2;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 7678 7787 . - 0 ID=cds.g6874.t1;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 7461 7517 . - . ID=g6874.t1.exon3;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 7461 7517 . - 1 ID=cds.g6874.t1;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 5800 7369 . - . ID=g6874.t1.exon4;Parent=g6874.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 5800 7369 . - 1 ID=cds.g6874.t1;Parent=g6874.t1 #PROT g6874.t1 g6874 MASLFDRLSDELIVLILSFCETTDLQSASKTSLRFQRIVGDDLLWRRVFERKWRSAWPVPMGRLMADSWREEYIERQHLSRAWQSAVAPPHRVYPGIGSIDTMCFDVDHRGCPSFVVASCVGGEAHRLTASGRATRRSTPFWTAATNPSIVNQNGGVSAAASTASVGHGAILCGSGDGRVRVVRLVEGGDRVRIPNRVSAAGTRAHSGRVTCSVLLGPDWGLAGGADGRVSVWQLSSPDAPVGFAVAGRAAGGPVLAVAGVAGVAVAAVHMTADGREGGLLRTWDWGCWDEPRSVVILPATPTSHLGLCAVPAAPFGSLAIVAHGLCGRDDAACVWWTDTNGALLSREMPTARCMSAASVGGIAVGCGSGGVALLAPWLVRGVDEVRPRGHRAAVGAIHLDSFKAVSACAENVRVWDRLTLDCLRKISLGGSLADAPARILAVGPLTVALVDGAHRALAVRTWDLTAWVNQVARGESTVQTAESSPWASAQASARSRRRSGGRRHSGGGDGTRDDAYADAEHGCREWVDMEDDLAREDAERARLARRYNVDGLTEQEALQLALAESMGAATLAVGAGVSKDDYVSAEEERQLLWALAASQLEG* # ORIGINAL: g6880.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 28186 29709 . - . ID=g6880;Name=g6880.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 28186 29709 . - . ID=g6880.t1;Parent=g6880;Name=g6880.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 28186 29709 . - . ID=g6880.t1.exon1;Parent=g6880.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 28186 29709 . - 0 ID=cds.g6880.t1;Parent=g6880.t1 #PROT g6880.t1 g6880 MGNSNGKRSNKAGCAAAFKPTSWKGKQQQPMGAPPAYEAVVGQGTGQPPLANNTIASSIIRASAHLEDSVRNSSIVGIVRRASERIDHFSTRSPSKKSAKGAHGAAPSLPSGAFRLDDFVLAETVGSGSFGKVIVTRHKQTARTLALKVVKKDMVIKRRQVEHIHNERRLLLEIDCPFIVNLHGTFQDNTNLYFIMDFVNGGEMFTILRRVGRFSVSASQFYAAEVLLALQYLHEDKNILYRDLKPENILIDRTGHIKLADFGFAKRVDPRDKAWTLCGTPEYLSPEMILNKGHGKEVDYWAYGVLVFEMLAGQPPFSGDNHYAMYETIIRGEYEFHGDYFSAEAKDLIKGLLQVDRTRRLGNLKNGAADIRNHPWFASMDWSALERQRVKPPYVPKVATESDATNFSAFDSVTALEIAPEADAAIDAHFVGFESVSPRFLKAAAVALVSISANDNSNNTHSVSMAAKPPKSRDHCAAAAKKDSLARALAYKKLATINASTTPNEAY* # ORIGINAL: g6876.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 9975 12435 . - . ID=g6876;Name=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 9975 12435 . - . ID=g6876.t1;Parent=g6876;Name=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 12353 12435 . - . ID=g6876.t1.exon1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 12353 12435 . - 0 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 12108 12225 . - . ID=g6876.t1.exon2;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 12108 12225 . - 1 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 11275 11860 . - . ID=g6876.t1.exon3;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 11275 11860 . - 0 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 10990 11089 . - . ID=g6876.t1.exon4;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 10990 11089 . - 2 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 10648 10862 . - . ID=g6876.t1.exon5;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 10648 10862 . - 1 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 10321 10481 . - . ID=g6876.t1.exon6;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 10321 10481 . - 2 ID=cds.g6876.t1;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 9975 10181 . - . ID=g6876.t1.exon7;Parent=g6876.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 9975 10181 . - 0 ID=cds.g6876.t1;Parent=g6876.t1 #PROT g6876.t1 g6876 MSVRRMSSVLSAGSEYSVEEEALLPSISSEEDYRLRWRSIRMMYLTMFLSSVGFSIVVPTLWSFLEEVGGSVTFQGWIVASYSLGQFIASPLFGAWSNRRRSIEPLAVSIAVNIAGNIMYCFSAAPHRHNDVYMLMARFVVGFGAGNVAVCRAYVSGATSVHERTGAMAHMSAAQGIGFIVGPALGAAFAPLKPGVRAGAFELDYLTGPGYLGAVFGVANFVLLVLLFTERRFDIAFDARGGLLRDVGSTSDDAFENEEDDDGIEAVRPPRFDRIAAGLCIFVFFVILFVFAVFETILSAFSMDMYGWSHQRTDLYTGILLACAGLLSVVTFMVAKPLSVRFGERRLLLAGLVIVSISFVAFVPFGPGSPRSCTKYAWCAHTPRLAFAQYVIATWLIAHGYPLASLCIYAIYSKVLGPAPQGIMMGALTSAGSAARALGPIYVSHVYEKIGPQPAFASIAAAVVVTAAVVLVFGRRLKPHRLFANSNAQ* # ORIGINAL: g6872.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 57 3297 . - . ID=g6872;Name=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 57 3297 . - . ID=g6872.t1;Parent=g6872;Name=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 3059 3297 . - . ID=g6872.t1.exon1;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 3059 3297 . - 0 ID=cds.g6872.t1;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 2625 2889 . - . ID=g6872.t1.exon2;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 2625 2889 . - 1 ID=cds.g6872.t1;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 1795 2484 . - . ID=g6872.t1.exon3;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 1795 2484 . - 0 ID=cds.g6872.t1;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 57 1665 . - . ID=g6872.t1.exon4;Parent=g6872.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 57 1665 . - 0 ID=cds.g6872.t1;Parent=g6872.t1 #PROT g6872.t1 g6872 MAQQIIHPTDPWDRLPLVDACLVDYVISFTCDDPDMSEAMPEPTDKDLPLLEGVGLFAFPFGHPGVPGAPFTLPVAVGDRTFNKHTFVLTDEVGVRRYGCVVTAITRLRVSNGAPNDVSDDIAWKTAVIISRWPFTQTFTALLSRLVDEWITHGSDAFVQKCSFLLFEIPLPPADGTIVNFRFCGDPFSVRRLPSSPLTQSSMGALAGRLGPGNLVTLFASLLLERSLLLFADDHRALTPACEALHTLVFPLLWEEVYVPLLPEELSAIAESPSPYIIGLKSTSALKLVGELDDYITCIDLDGDTITNGASFPRQRHAALVADLRAAVGDVWPVQSSASSSTGGDGLFTPDAEAAIRRVFGRFVEDILASAAPFISAGDFRTEDFVASAPSCDRDFLRAFVTTAMFCQHVDRTARRLVEDGVLSAENPVIRLRAATLEATRQDSVATSCPALSQSMQEHMTSAVCKKRASLASSAVVSIGENDGKAFVGRRHSQRFLKLTSSLSPVFLWQPYEHLVEHLSLLLPDAVALAEGGDAHAAGDNGLEDEESTRPRPDVVLWMRAVALYHMKLHTCCLQDLLASIIMHSRRSPPHVFPNDLVEVFSHLSEEDKAKFPANVIRIAEAESGDTFAMVVDATLAWAASLGQPLHKHPLCSHSIGNKFARTSTVRHPRVRSHPGGSPLVSSSAPSESSKAPVSERLRSDSHDGDADDGRDKASSYVSEGSGTPIPSGERRKLVRDRAESDGYVHAEEADDDFGDMQFPMSPPSASAIAAAAIAGPAMAHARRRLTRVPSVGEEGAKALRRMSVLVERRMSRSVLPAPRASLVGAVAGIQGVAAGAKRPSIAGPAAGGFLRRADSIAVRVRTGGGRIPAQTGAPTTPTSAGAMVPGMSSTERLILNLESIDDEETLAGPKDSEDHVGALNPVELSIELMERLL # ORIGINAL: g6881.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 31271 35560 . + . ID=g6881;Name=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 31271 35560 . + . ID=g6881.t1;Parent=g6881;Name=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 31271 31322 . + . ID=g6881.t1.exon1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 31271 31322 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 31486 32150 . + . ID=g6881.t1.exon2;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 31486 32150 . + 2 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 32310 32680 . + . ID=g6881.t1.exon3;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 32310 32680 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 32996 33089 . + . ID=g6881.t1.exon4;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 32996 33089 . + 1 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 33191 33301 . + . ID=g6881.t1.exon5;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 33191 33301 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 33445 33750 . + . ID=g6881.t1.exon6;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 33445 33750 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 34043 34600 . + . ID=g6881.t1.exon7;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 34043 34600 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 34787 34894 . + . ID=g6881.t1.exon8;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 34787 34894 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 35357 35560 . + . ID=g6881.t1.exon9;Parent=g6881.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 35357 35560 . + 0 ID=cds.g6881.t1;Parent=g6881.t1 #PROT g6881.t1 g6881 MGNSSSIQAHNSVAPAKVEPVRLAVTADDVVAFLKANPALVTHVVSEMATTKDIQAWISGHVVEARQLDPPRGTAMAVAPTLNGQSTPRRRDSEDEDGLAPLRRGSDQRSASTGNVRKMSTSAAELRIQKTKLQESLDDEIAKRIALLEVAHDIHEELDTPRLCMKIMQSVGKLLDAERCTLFLVDKDNNELFSYVMDTRTRKNSVAPNSSTMGLAMGDEVYRIPIGAGIHGHVAQTGEIVNLTDAATDPQFSPEHDGDGIRIKTMLSMPIQHKDEGIMAVASIANKHGDKPFDSYDEGLFENFLVLCSIGLRNAKLYERTVNANKQRETLLHLAKTIFEYVEIDELVKKIMLLARGLCKAERCSVFLVDKDKEQLYSKVFDLTEEEKQKTDVPQKEIRFPLSKGIAGHVATTGVSENILEPYSDPRFNSKVDEETGFKTRNILCMPITSADHSVVGVAQLVNKIGHNGFTREDEELFTGFAVYCGIALNNAQLYDKSFKSERRLKVAMELLSYHAQAPEEDVSRLRHRVKSKLTEYGPVENFFWSSWSIADDETCAVVFGMFEELGFMDRYKIFQETLCRFVLTVRKNYRKVRYHNWQHAFGVSHQMYSIIKGSPMIADALSDVEKFAMMVACVCHDVDHRGTNNSFQQQAKSPLADVYGTSTMEKHHFAHTVTILNTDGHNIFESISNYAEILAYLEDSILATDLALYFKNRDRFKQIIASKSFDKNSADHRSLLRGILMTCCDISAITKPWEVGFIDFICLPAFDMLAKLAAETQPLVEAVKANRERWQNMVGTEAAEQLKRELAVVPSVKVSSAVNLV* # PASA_UPDATE: g6883.t1, single gene model update, valid-1, status:[pasa:asmbl_7210,status:12], valid-1 NODE_42_length_53315_cov_40.6795 . gene 41895 46123 . - . ID=g6883;Name=g6883.t1 NODE_42_length_53315_cov_40.6795 . mRNA 41895 46123 . - . ID=g6883.t1;Parent=g6883;Name=g6883.t1 NODE_42_length_53315_cov_40.6795 . five_prime_UTR 46014 46123 . - . ID=g6883.t1.utr5p1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 45454 46123 . - . ID=g6883.t1.exon1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 45454 46013 . - 0 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 45177 45298 . - . ID=g6883.t1.exon2;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 45177 45298 . - 1 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 44970 44990 . - . ID=g6883.t1.exon3;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 44970 44990 . - 2 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 44591 44674 . - . ID=g6883.t1.exon4;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 44591 44674 . - 2 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 43459 44258 . - . ID=g6883.t1.exon5;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 43459 44258 . - 2 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 42875 43017 . - . ID=g6883.t1.exon6;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 42875 43017 . - 0 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 42393 42515 . - . ID=g6883.t1.exon7;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 42393 42515 . - 1 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . exon 41895 42067 . - . ID=g6883.t1.exon8;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . CDS 41947 42067 . - 1 ID=cds.g6883.t1;Parent=g6883.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 41895 41946 . - . ID=g6883.t1.utr3p1;Parent=g6883.t1 #PROT g6883.t1 g6883 MESDGDIPSVAAVTALPIPHFPALSPVPDAAAGGTDHGIPAPGPAQLALFTMWITCLVILAVWESAALYRAASSVLRKCGAMRGSRGKSRGGYDTDEELLLPRQERGRPPQLTGADCEAGDADRPRDSPEQAKRVGARPSAWLAAQQLMHRLGDGSKGTLRDVVVLGAIAYYMYACDVAKLFPDEDRVYNRDTFIFILISIGVLALATLRKSHTDKLLHREQTEEWKGWMQIIFVLYHYFAAKEIYNPIRIFIACYVWMTGFGNFSFFWIRKDFTLLRVCRMLFRLNFLVIVVATAVGKRYMVYYICAMHTYWFFSVYAMMRVGASRNNDDNRRFMAAKFAAYFVCNAAMFGIPGLFDALFSPFTFLLGLYDDPNGLPLHEWKFRATLDHWMTFVGMLCAYNHPTFEALMKKLTLFSADNWTEAWELVSGAAEKPHPKQAPQAAPPAPGNPATPGSADGSESAATAPDDGRKKGASLRVNGVGAAIARDGWRHVTLVGVSLVAVWSVIAAVFAVYASTCLVLPKLDFNEWHPYTAWMPILVYIPLRNATPWLRAYHSEVLAWLGKITLETYLAQSSIWLRQEAKRVIVYIPGYPLVNFALSTAIYIVLSKKLFDITGSLSSALLPDKGALRNVVCCVVAFAAYYFTSLAYIMEHGWN* # PASA_UPDATE: g6877.t1, single gene model update, valid-1, status:[pasa:asmbl_7207,status:3], valid-1 NODE_42_length_53315_cov_40.6795 . gene 13514 15098 . + . ID=g6877;Name=g6877.t1 NODE_42_length_53315_cov_40.6795 . mRNA 13514 15098 . + . ID=g6877.t1;Parent=g6877;Name=g6877.t1 NODE_42_length_53315_cov_40.6795 . five_prime_UTR 13514 13720 . + . ID=g6877.t1.utr5p1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . exon 13514 13801 . + . ID=g6877.t1.exon1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . CDS 13721 13801 . + 0 ID=cds.g6877.t1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . exon 14000 14068 . + . ID=g6877.t1.exon2;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . CDS 14000 14068 . + 0 ID=cds.g6877.t1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . exon 14166 14322 . + . ID=g6877.t1.exon3;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . CDS 14166 14322 . + 0 ID=cds.g6877.t1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . exon 14570 14646 . + . ID=g6877.t1.exon4;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . CDS 14570 14646 . + 2 ID=cds.g6877.t1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . exon 14797 15098 . + . ID=g6877.t1.exon5;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . CDS 14797 15069 . + 0 ID=cds.g6877.t1;Parent=g6877.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 15070 15098 . + . ID=g6877.t1.utr3p1;Parent=g6877.t1 #PROT g6877.t1 g6877 MAATDDLLLMFNNMGTTDHDVLVNQFQNLAGAEDPNICRFFLEANNWSLQHAIASYFDNAGSLEIYRVAPPQIAYLGDVSPDAWREVQPGAPFHRVYRLKNSGHDEWPDNCGLVFSGGDRLAAPDFMRLPRLAAGAEYDLELTLAAPAAPGQYACCWRCMTKSESGILVPFGEPMWVVVGVGQPLDISQLDFGRLGLGEQSSWQVQQQLQQQQSSAME* # PASA_UPDATE: g6879.t1, single gene model update, valid-1, status:[pasa:asmbl_7208,status:3], valid-1 NODE_42_length_53315_cov_40.6795 . gene 25102 28125 . + . ID=g6879;Name=g6879.t1 NODE_42_length_53315_cov_40.6795 . mRNA 25102 28125 . + . ID=g6879.t1;Parent=g6879;Name=g6879.t1 NODE_42_length_53315_cov_40.6795 . five_prime_UTR 25102 25152 . + . ID=g6879.t1.utr5p1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 25102 25234 . + . ID=g6879.t1.exon1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 25153 25234 . + 0 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 25435 25500 . + . ID=g6879.t1.exon2;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 25435 25500 . + 2 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 25584 25719 . + . ID=g6879.t1.exon3;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 25584 25719 . + 2 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 25800 25866 . + . ID=g6879.t1.exon4;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 25800 25866 . + 1 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 25988 26126 . + . ID=g6879.t1.exon5;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 25988 26126 . + 0 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 26291 26540 . + . ID=g6879.t1.exon6;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 26291 26540 . + 2 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 26711 26843 . + . ID=g6879.t1.exon7;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 26711 26843 . + 1 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 27032 27162 . + . ID=g6879.t1.exon8;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 27032 27162 . + 0 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 27269 27362 . + . ID=g6879.t1.exon9;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 27269 27362 . + 1 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 27467 27598 . + . ID=g6879.t1.exon10;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 27467 27598 . + 0 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . exon 27744 28125 . + . ID=g6879.t1.exon11;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . CDS 27744 27863 . + 0 ID=cds.g6879.t1;Parent=g6879.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 27864 28125 . + . ID=g6879.t1.utr3p1;Parent=g6879.t1 #PROT g6879.t1 g6879 MTSDTRTPAAKTGRPYDIIVHGASGFTGALVCEYLARTYGRKSGVSWAMAGRSADKLKAVRAKLVAADPSCADTPLLAAELSSHYSLVAMARQARVVINCVGPYKFFGEQVVKACLEAVTDYVDITGEPEFVRRIVARYHTEAERKGVLIIHCAGFDSIPADLGTFFAIRAASLSDAATTASLPASQVRSVEAVYRVQGHFSNGTMTSAVNALASFTLQDVRLVLGEWYGGSHSLAAIALPSPRAPRFYPHRNAATGTWVVPMPVVDSFIVRRSLSFATLAYPPPAVTYGQYFEVSSFWKLLLLGLLLPFICAFAILARFSLGRRLLLKLAPDQRSGPSEAQRKKSWFRCVFIARDSNGNILGRAQVSGGDPGYTETAKMVTESALSMLELRGGTKLTANASAPSAASSSAAPVGGVLTTASALGHGLVTRLVNAGIKFVVLDSLPAGR* # ORIGINAL: g6884.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 47497 49439 . + . ID=g6884;Name=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 47497 49439 . + . ID=g6884.t1;Parent=g6884;Name=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 47497 47962 . + . ID=g6884.t1.exon1;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 47497 47962 . + 0 ID=cds.g6884.t1;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 48104 48241 . + . ID=g6884.t1.exon2;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 48104 48241 . + 2 ID=cds.g6884.t1;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 48610 48722 . + . ID=g6884.t1.exon3;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 48610 48722 . + 2 ID=cds.g6884.t1;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 48915 49439 . + . ID=g6884.t1.exon4;Parent=g6884.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 48915 49439 . + 0 ID=cds.g6884.t1;Parent=g6884.t1 #PROT g6884.t1 g6884 MDIRTFCIVLAAALSIASHATDAKPAVRSPVLVLGIDGLGSMYFHPETDMARVHREIILEGAHTMDCRSVVPADSKPNWAAHTMGGSVPETGVRDNTWTLGSYAMIDATKGHGDGLLPLTDPGQYFPSIFSEVKRHSPHRKTMLVSDWGGFFEIIDPKMVDVALDCDEAECLVDKFVGHVLSPSGGVPDLAVVHFDHVDHAGHLHGWGSQEYMDAVRSADALAGKLFDAYRSAGVWDDTLFILVSDHGGSGNFHGQMRLDNVLVPWFVRGPGVVKNHTLGSYVRNVDTAPTVLEHLGVPIPRVWTGVSVAELRNATHGEAARGLMRLYGWVNMHLDPANAYISMPRIFRLAGGIGVVVFAAVVYGLYARRRSERRFRASRGGVKKVDEADDETYSPIPIAHNTRTRRPMAAST* # ORIGINAL: g6882.t1 original gene structure, not modified by PASA NODE_42_length_53315_cov_40.6795 AUGUSTUS gene 36073 41561 . + . ID=g6882;Name=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS mRNA 36073 41561 . + . ID=g6882.t1;Parent=g6882;Name=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 36073 36314 . + . ID=g6882.t1.exon1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 36073 36314 . + 0 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 36515 36593 . + . ID=g6882.t1.exon2;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 36515 36593 . + 1 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 36871 37052 . + . ID=g6882.t1.exon3;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 36871 37052 . + 0 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 37188 37345 . + . ID=g6882.t1.exon4;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 37188 37345 . + 1 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 37660 37783 . + . ID=g6882.t1.exon5;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 37660 37783 . + 2 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 38385 38520 . + . ID=g6882.t1.exon6;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 38385 38520 . + 1 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 38714 38851 . + . ID=g6882.t1.exon7;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 38714 38851 . + 0 ID=cds.g6882.t1;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS exon 39054 41561 . + . ID=g6882.t1.exon8;Parent=g6882.t1 NODE_42_length_53315_cov_40.6795 AUGUSTUS CDS 39054 41561 . + 0 ID=cds.g6882.t1;Parent=g6882.t1 #PROT g6882.t1 g6882 MPPAGQKKPPHDFRVLASLAGEGESGGSAHTADGSGVAAVAALTVGVDDFASPSVQHVAAAYGVSVSSAMQNEPEMAAMDLYLESLGLTRLPIVKDGSCLFRAIAAQLDHTQANHDDLRQECISFLEANRDDYEPFLAIPFDHYVFDMHKSSSWGGEIELQCMARLFSINFCIYQHTDAAPLEVTCGDDAIATVRLCYSGGNHYDCVFTKEAMGTIRLVQGLLYDIINCAIELPLDSEKFSERNVQYEVWLNDLKTQHACDRAIAASVSEQENDGYTALSGYYRKGADGSETGGRGKGGRRGNKSQQRRIPIGGDPEAAYERNSHSHTHSHGGSAASAKSPAVRTTDAVADFPSLKETPKKAPAASPAGPKAAKQAIPTPSMCVPVASSPTTPTPSFAPPVARSPATTPDAKTSVWGARRNWNEHFDDPHVMSHSPQPTIGDGASIVPVAASGDHAADAGSSAIGSAMASTASGGKTAADVPPSGAADAKQAAPHRKHAQATVIRYASEAEALAHGADLGVAAVTAHSVVTPPAVVTTAAAATTTRASDTKKAASGGASGAASGAASSGGGRRWETQKAVVASAESTPTAASAPSPSSSTSGAALATGHVPVPSTSPCSASAPSSATSAATSAATSAAPASAPASVSASSAVLLVGPIPVGPIPVDVKSAAAGTLRVPITETDSPLAQELTASPAVAVTATAHGSLHKSAPPSSAAVDRSAQQAMVTPVAKADVASVAAGDLALLRSISSSVAGGVGEDSMFMFGVFGGGNVSAPAAPSVAPDQRAVGGRGDGAIGSSAVHAYGGAVGGDVVGGVSALNNSDVMAPDYDDYSSIAYRDGDLDYGAAGIGQVGGSDALFYGGTHGGQHLYGGPYAYRGASGMPHVPQQHHPHGLPYAHASYGYGAFPGYAYSGDHPGGHFQSYQPFGYDGHNQPPYNAYNAYDLHNAYNAYAPALYGGGHAAPYSAPGAGEDPGVTWGVGLDGLEYDDADDAYTLPASHVTGVEADNDHVGETANGVSLDDVEDSGDNAATRRKKQRALQQQQQQQQQQLQLQLQLQQQQQLQQQLQYGVYSGQAFHSHVQYEPPRHTEHEFVQYEQIHDQPQHWQGRQMRQPQQSPRNDGRWRGRDRERRPGAGAGGDAVTGSQTPRQLQHQHTHQRTHQHQQQSRGKDGGDHAKQPMSSSSTERRKE* # PASA_UPDATE: g6875.t1, single gene model update, valid-1, status:[pasa:asmbl_7206,status:12], valid-1 NODE_42_length_53315_cov_40.6795 . gene 8313 10213 . + . ID=g6875;Name=g6875.t1 NODE_42_length_53315_cov_40.6795 . mRNA 8313 10213 . + . ID=g6875.t1;Parent=g6875;Name=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 8313 8392 . + . ID=g6875.t1.exon1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 8313 8392 . + 0 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 8509 8624 . + . ID=g6875.t1.exon2;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 8509 8624 . + 1 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 8725 8834 . + . ID=g6875.t1.exon3;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 8725 8834 . + 2 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 9023 9129 . + . ID=g6875.t1.exon4;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 9023 9129 . + 0 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 9328 9487 . + . ID=g6875.t1.exon5;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 9328 9487 . + 1 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . exon 9590 10213 . + . ID=g6875.t1.exon6;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . CDS 9590 9862 . + 0 ID=cds.g6875.t1;Parent=g6875.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 9863 10213 . + . ID=g6875.t1.utr3p1;Parent=g6875.t1 #PROT g6875.t1 g6875 MGRLSRHKKIKAIDPFYEGPRKKTSDDLEGVTAPSAADDDRLPRSLRTLISAKQRAERFVSLGKKGGITKARDAISAKPHAKKETPKNENKQKALADMVKPKPGETLRDFNDRVEMASRMRLNDAVKDTKEKSVRRKEHLAGRKAKQMAQKARRKDVLSERAPSLPTAVRFGEVAQAPPTLTAQPKRKTPKVGRSPLLLDALMRPSASSTAASAGATASAASARSSGGGSGSAATGPIRPRDMAPSARIKWEAERENVIAAYRRVRGTEKPAALALMGGMA* # PASA_UPDATE: g6885.t1, single gene model update, valid-1, status:[pasa:asmbl_7211,status:12], valid-1 NODE_42_length_53315_cov_40.6795 . gene 49904 53185 . - . ID=g6885;Name=g6885.t1 NODE_42_length_53315_cov_40.6795 . mRNA 49904 53185 . - . ID=g6885.t1;Parent=g6885;Name=g6885.t1 NODE_42_length_53315_cov_40.6795 . five_prime_UTR 53090 53185 . - . ID=g6885.t1.utr5p1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 52975 53185 . - . ID=g6885.t1.exon1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 52975 53089 . - 0 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 52399 52481 . - . ID=g6885.t1.exon2;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 52399 52481 . - 2 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 51691 51794 . - . ID=g6885.t1.exon3;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 51691 51794 . - 0 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 51337 51439 . - . ID=g6885.t1.exon4;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 51337 51439 . - 1 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 51038 51184 . - . ID=g6885.t1.exon5;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 51038 51184 . - 0 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 50504 50650 . - . ID=g6885.t1.exon6;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 50504 50650 . - 0 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . exon 49904 50221 . - . ID=g6885.t1.exon7;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . CDS 50099 50221 . - 0 ID=cds.g6885.t1;Parent=g6885.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 49904 50098 . - . ID=g6885.t1.utr3p1;Parent=g6885.t1 #PROT g6885.t1 g6885 MIFQKRSTRTRVSAETAMAYLGGHPIFLGKDDIQLGVNESTQDTSEVLSRLSSVILARVYKHSDVEELAQYSRVPVINALSDTYHPLQALADYMTIMERFGRNSLEGLRLAWVGDGNNILNSFIVTAPKLGIHLQVATPEKYRPREDILEIGKALALQNDTTISISNDPKKAYKDARVIATDTWVSMGDEAEKEERLRAFNGFQVTMSASTHAAPDWMFLHCLPRKQEEVDDNVFYSHRSAVYDEAENRLYTMMAVLMYVLRVPPPPGFAVSH* # PASA_UPDATE: g6873.t1, single gene model update, valid-1, status:[pasa:asmbl_7205,status:12],[pasa:asmbl_7209,status:12], valid-1 NODE_42_length_53315_cov_40.6795 . gene 3844 5526 . + . ID=g6873;Name=g6873.t1 NODE_42_length_53315_cov_40.6795 . mRNA 3844 5526 . + . ID=g6873.t1;Parent=g6873;Name=g6873.t1 NODE_42_length_53315_cov_40.6795 . five_prime_UTR 3844 3893 . + . ID=g6873.t1.utr5p1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 3844 3927 . + . ID=g6873.t1.exon1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 3894 3927 . + 0 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 4027 4069 . + . ID=g6873.t1.exon2;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 4027 4069 . + 2 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 4186 4307 . + . ID=g6873.t1.exon3;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 4186 4307 . + 1 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 4488 4591 . + . ID=g6873.t1.exon4;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 4488 4591 . + 2 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 4801 4923 . + . ID=g6873.t1.exon5;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 4801 4923 . + 0 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . exon 5097 5526 . + . ID=g6873.t1.exon6;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . CDS 5097 5330 . + 0 ID=cds.g6873.t1;Parent=g6873.t1 NODE_42_length_53315_cov_40.6795 . three_prime_UTR 5331 5526 . + . ID=g6873.t1.utr3p1;Parent=g6873.t1 #PROT g6873.t1 g6873 MASLRTFGHMRSLLRSTPFLPSTIVRSSALGLVHTTASTTVAAPSPATTSAGPIVARSSAAPSNAVEYVLAKVDQVVNWAHTGSLWPMTFGLACCAVEMMQAAAARYDFDRFGIVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKIRRSKTSTMWYRK* # ORIGINAL: g6344.t1 original gene structure, not modified by PASA NODE_3039_length_4474_cov_42.3403 AUGUSTUS gene 469 4305 . + . ID=g6344;Name=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS mRNA 469 4305 . + . ID=g6344.t1;Parent=g6344;Name=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS exon 469 623 . + . ID=g6344.t1.exon1;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS CDS 469 623 . + 0 ID=cds.g6344.t1;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS exon 766 824 . + . ID=g6344.t1.exon2;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS CDS 766 824 . + 1 ID=cds.g6344.t1;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS exon 1059 1267 . + . ID=g6344.t1.exon3;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS CDS 1059 1267 . + 2 ID=cds.g6344.t1;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS exon 1483 2580 . + . ID=g6344.t1.exon4;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS CDS 1483 2580 . + 0 ID=cds.g6344.t1;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS exon 2749 4305 . + . ID=g6344.t1.exon5;Parent=g6344.t1 NODE_3039_length_4474_cov_42.3403 AUGUSTUS CDS 2749 4305 . + 0 ID=cds.g6344.t1;Parent=g6344.t1 #PROT g6344.t1 g6344 MLAPCDALPLPRTVHVDDGSTLRLGCGWSLLRLFQSIDRLQDSSIAAPDVNRVEVYYGSPRALLFMEEPIIDNRGITAVPGCSLGYALQTHTSLCPALHLLAENDMVSDADTVPGILRSDAGRGRFASPQLCPTTTYYVRGVRLNLLPSVDVFEAELLRNMNILRALEVGADPSNPGVDGRAVALLERRVSVGVHNGRTYVHHPRIAQVDAVDDGHVGFEGTFELSELVADPLFALVFRLEYRFSWPLPQPPASAKGMKGALSSSFSSLPFTKTVGVAVGWVAFCPFRDGGAAAEATHSLRMIQGLSCNPEGTVVYRGCQKAAKGALPMEPPSLEFTISRRGGNLTSVPDRPPSTVPVPPAPASPSKRDSALLAAQTSAGRMGQTSVNPPTGQMSLSDLAARARVDQLKRQRELSMQSTAVSLMQHPSARTPPLAQDTQNTQRTPRTSGRPPLSMSALGDSITGARPPRPKNMTQLHAHTHDQSAGMKRVTSLVDVDLESSMALPDKRPSVPMSNMQGHLGSSLSRATKARLFSAGFADAITSEKGAPAIDVSTPLPFDNVAHAVEMAGGTASAAEALAMEEGDPRTNEIVIQMMAFSPCRSDSDLDGMGATLLAPQLVPFTPRSLFFTVQFYRFPTVVTESVVVDDPVGLGTEEASPHGSFEPPRFLMRHSDREEGGGETSDGIARRQKQFGLQLRFRVDVAGCGPSEHATLVRYMRDRAVQIEAWDGTTRLPLGAAMVPLRALLRRGRDAVQATEEVDLVWSDHTERAEVGDVAVGAHESHVRGRLILRTANIGRAPVVPMQGTQSSLSPDRRQMGSLRTRSETAISGVAPSLRRPVDVREGHIVDSRDRPSAVVKKRARAKRMVEEDGELAAVLVGRTQSRLSLDGGGERPGSGAPIPAGALSPERKRKLDRMEAIRHQGLRKGSRSQVSVSSAPGAVRASSPFRPGFMEEQKLRAEALGTIELYRQRQKRETIARLLEASITVTHRLRPSFGTTEFFEYVLRNPYSEDHAFSIVFDDPELR* # PASA_UPDATE: g3042.t1, single gene model update, valid-1, status:[pasa:asmbl_8308,status:12], valid-1 NODE_5833_length_703_cov_180.801_potentialcontaminant . gene 2 403 . + . ID=g3042;Name=g3042.t1 NODE_5833_length_703_cov_180.801_potentialcontaminant . mRNA 2 403 . + . ID=g3042.t1;Parent=g3042;Name=g3042.t1 NODE_5833_length_703_cov_180.801_potentialcontaminant . exon 2 403 . + . ID=g3042.t1.exon1;Parent=g3042.t1 NODE_5833_length_703_cov_180.801_potentialcontaminant . CDS 2 385 . + 0 ID=cds.g3042.t1;Parent=g3042.t1;5_prime_partial=true NODE_5833_length_703_cov_180.801_potentialcontaminant . three_prime_UTR 386 403 . + . ID=g3042.t1.utr3p1;Parent=g3042.t1 #PROT g3042.t1 g3042 QNDPDNVLYGSWMFHCLLDGLNRPDQCPGIAIRIISIQPLELPGERRHYAQLAIEFSAVEVLETWKFWLKAGTQYPDGEVATARTFIYIDNPDCFRSCALWKYKDTWKKWQQCNPTAVALHAEPRLF* # PASA_UPDATE: g11188.t1, single gene model update, valid-1, status:[pasa:asmbl_21,status:12], valid-1 NODE_1007_length_14807_cov_42.8485 . gene 7098 13171 . + . ID=g11188;Name=g11188.t1 NODE_1007_length_14807_cov_42.8485 . mRNA 7098 13171 . + . ID=g11188.t1;Parent=g11188;Name=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 7098 7760 . + . ID=g11188.t1.exon1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 7098 7760 . + 0 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 7908 7955 . + . ID=g11188.t1.exon2;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 7908 7955 . + 0 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 8172 8315 . + . ID=g11188.t1.exon3;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 8172 8315 . + 0 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 8444 8529 . + . ID=g11188.t1.exon4;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 8444 8529 . + 0 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 8703 9507 . + . ID=g11188.t1.exon5;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 8703 9507 . + 1 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 9650 9845 . + . ID=g11188.t1.exon6;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 9650 9845 . + 0 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 10044 10182 . + . ID=g11188.t1.exon7;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 10044 10182 . + 2 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 10303 10400 . + . ID=g11188.t1.exon8;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 10303 10400 . + 1 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . exon 10588 13171 . + . ID=g11188.t1.exon9;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . CDS 10588 12965 . + 2 ID=cds.g11188.t1;Parent=g11188.t1 NODE_1007_length_14807_cov_42.8485 . three_prime_UTR 12966 13171 . + . ID=g11188.t1.utr3p1;Parent=g11188.t1 #PROT g11188.t1 g11188 MAGMSRRFQFTAVSVTTAVALVFALSLFACISGTSAAVMFVNATNNNLARPTYGVAGYNYLRLIPARYGNATDATPISGLPSAREVSNKVFGRVAHFSAHSISDALPYWGQFLAHDITLTKGGSESFPIPVPTCDYHFDPKCTGTKTIGFSRGARSLDANGAWTHLNMITSFVDGSCVYGATDDRANAIRTFSDGKMNMSTGELPPFNVPELEQANAQNAKFFLTGDIRGNENPLLQSFHTVFLREHNRKVTELKTANPSWTDQQLYDYGRAWVAALLQKITFSDYLPPLLGKRLPTYTGYNASVDPRIDIFFTVAAFRYGHSAINMLIPRINADGTTHAAGHLLLRDGRWNMQPLQSHGIEPILRGLGQQIESAVDNRVVSDMRNAFDLGDYFDIASFNIQRGREAGLPSHNDMRAYFGLPRIQNFTHLTGGDTDSADILASLYPTIDDVDPWVAGLSEPENPGALLGALFAASMEDQFRRLRDGDRFYFEAGNLPLSADEIAEVRQTRLSDIIRRNFLAPVGTGLVSGDLFRKQPSPLESTGTSATADGTYAFSAKLNTKILLEWTIRDIKWLDARITYQGTGWVGFGMGSKTMPKSDIILGYVEDDTGKVVIEDRYASDNALPDTDVSLGNTNDITNINGSQISGVTVLKFSRLLKTGDPLDYAIVEGTASPVVFAFSTTDSLGYHGQDNRAIATIDFYTGQVTCGDAASTPFNVFAFHGGLMGVVFCIAYPLGILVARYGKSYYLWLVVHVEIMLFGASDVLILVAVALSGAHSASHTISSHGIIGMLIASCIILQVLLGLSARYFMKKSSATLMSKVTRIGHMVLGYAMLILGLINANKGISKLLIGKDDEKDMAFGFYYAWVSVITATFFILEANRFYIAHGHRIGFSKVAPSDHTPLTRSKSQAEMRGYTWKDISERVSNDGAHLFVVNRIVYDLGDWVSVHPGGERILLAAVGTDVTREFMGVELAKAESHEHLLDDLDYDDGGKLGWMARIFSPAGGAPGKALGLTPNPSGDYKGGAMPMSPLPTPLLRRRSSSAFKNRAEPQPVHAHSGIAWRSLRNFAVGRLLDSENGIALDHANNAGPPTLKRGVTSMSMVSVGSNSEEFARYTLVSKRTLTHPAAVNAVRLFRFAIEPDSSLAKAQMRTGQHVIVHAVVNGRSLQRSYTLVGYSAKAGLLELAIKIYPKGPLSSHLDQIAVGASVKLRGPLGHQLLCKTPIAKTFNGCWDHVGMIAGGAGITPFINLISHHVKKGPYKTRKGMSCNLLFANSTALDIFYGERLADLADETEGYFKVFHMLSRPPTEWDGMSGRITTEAIRISMPPPPGATESALKGRRMSADNVASSSLNLFGRHKSLMGLWKETKQDDDDETAAATEAGEAGTVTVTTGGDADADGDDPSSSQPRDEEQGGAVDKRSSSSARSVPNATEDAHAAPAVVVAAPPPALPRDKSSGVAFQRHEPDLREIDSAFSVETSIAVTTENMRIFVCGTGAFNAHVTSLLREMGYPQAVIVVL* # ORIGINAL: g11189.t1 original gene structure, not modified by PASA NODE_1007_length_14807_cov_42.8485 AUGUSTUS gene 14696 14807 . - . ID=g11189;Name=g11189.t1 NODE_1007_length_14807_cov_42.8485 AUGUSTUS mRNA 14696 14807 . - . ID=g11189.t1;Parent=g11189;Name=g11189.t1 NODE_1007_length_14807_cov_42.8485 AUGUSTUS exon 14696 14807 . - . ID=g11189.t1.exon1;Parent=g11189.t1 NODE_1007_length_14807_cov_42.8485 AUGUSTUS CDS 14696 14807 . - 1 ID=cds.g11189.t1;Parent=g11189.t1 #PROT g11189.t1 g11189 SNMNDLVSEYQQYQDATAEEEGEVDGEEEEADQEEA* # PASA_UPDATE: g11187.t1, single gene model update, valid-1, status:[pasa:asmbl_20,status:3], valid-1 NODE_1007_length_14807_cov_42.8485 . gene 137 5134 . + . ID=g11187;Name=g11187.t1 NODE_1007_length_14807_cov_42.8485 . mRNA 137 5134 . + . ID=g11187.t1;Parent=g11187;Name=g11187.t1 NODE_1007_length_14807_cov_42.8485 . five_prime_UTR 137 386 . + . ID=g11187.t1.utr5p1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . five_prime_UTR 505 625 . + . ID=g11187.t1.utr5p2;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 137 386 . + . ID=g11187.t1.exon1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 505 743 . + . ID=g11187.t1.exon2;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 626 743 . + 0 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 953 1081 . + . ID=g11187.t1.exon3;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 953 1081 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 1443 1609 . + . ID=g11187.t1.exon4;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 1443 1609 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 1847 2086 . + . ID=g11187.t1.exon5;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 1847 2086 . + 0 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 2341 2440 . + . ID=g11187.t1.exon6;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 2341 2440 . + 0 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 2820 3248 . + . ID=g11187.t1.exon7;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 2820 3248 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 3507 3584 . + . ID=g11187.t1.exon8;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 3507 3584 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 3814 3882 . + . ID=g11187.t1.exon9;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 3814 3882 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 4252 4568 . + . ID=g11187.t1.exon10;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 4252 4568 . + 2 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . exon 4818 5134 . + . ID=g11187.t1.exon11;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . CDS 4818 4901 . + 0 ID=cds.g11187.t1;Parent=g11187.t1 NODE_1007_length_14807_cov_42.8485 . three_prime_UTR 4902 5134 . + . ID=g11187.t1.utr3p1;Parent=g11187.t1 #PROT g11187.t1 g11187 MPADQSIYDAAGSGDLSRVRDLVEAGCPVDAKSVDEQTALITASRRGRTDIVAYLLQKGADVHVQDVHGETALLCAAANGHEECVALLVEAGADLNHTNVFGNKAADIALRKGYKDIARRLGATVTESDAPRMPDFGRLRGSSSMPSLFQLLEGKAVSPSTAARHSLDSQHAAEGSGRARFHHQRGASTTAARPTATTVRVAPLEERSSVDKAALKANFVGSPRPAPFLRAGSLDEMLKGQKSATSSVGSKAPVHEANTGGSAFSIPEDAEHEAAATLTGQEPSLFSRAKHPTCEDTQASTSASASASASAGKSHAFTIGKSTLASSEESGLLSVTTSEIDVGVNKDEFEATVELSEGTDDTVAAAPLADSEGRTESGKVFVEDGTSWKKTGLNGIEDAPQFSESDDDADGPSVPIPSSRRGSVTADMVIVPPPNKALKGILKNSSQPVRRRSSLRNFISEKILRRPSVTKLNTEGAELGSSPSSSSSTPVGSLSSATGSGPSAAAVLARFNRNISWNNRVAQIATFGRTEYDRGGPITWNLSGNEKKQVAKELNEYKRREMVVHKTSKKYTHYIV* # PASA_UPDATE: g1539.t1, single gene model update, valid-1, status:[pasa:asmbl_5484,status:12], valid-1 NODE_3050_length_4446_cov_38.3067 . gene 122 1066 . + . ID=g1539;Name=g1539.t1 NODE_3050_length_4446_cov_38.3067 . mRNA 122 1066 . + . ID=g1539.t1;Parent=g1539;Name=g1539.t1 NODE_3050_length_4446_cov_38.3067 . five_prime_UTR 122 173 . + . ID=g1539.t1.utr5p1;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . exon 122 281 . + . ID=g1539.t1.exon1;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . CDS 174 281 . + 0 ID=cds.g1539.t1;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . exon 531 703 . + . ID=g1539.t1.exon2;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . CDS 531 703 . + 0 ID=cds.g1539.t1;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . exon 926 1066 . + . ID=g1539.t1.exon3;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . CDS 926 1001 . + 1 ID=cds.g1539.t1;Parent=g1539.t1 NODE_3050_length_4446_cov_38.3067 . three_prime_UTR 1002 1066 . + . ID=g1539.t1.utr3p1;Parent=g1539.t1 #PROT g1539.t1 g1539 MPLLTIETSVPRSAIPEALVKEASALVAKQTSKPEAVVFVVVRPDALLSFGGSTEHAALVSINAIGGVTGDDNVGHTAEFSKLITAHLNIPASRIFFNFTDFQPTHWGWNGTTVAKLQ* # ORIGINAL: g1540.t1 original gene structure, not modified by PASA NODE_3050_length_4446_cov_38.3067 AUGUSTUS gene 2085 4070 . - . ID=g1540;Name=g1540.t1 NODE_3050_length_4446_cov_38.3067 AUGUSTUS mRNA 2085 4070 . - . ID=g1540.t1;Parent=g1540;Name=g1540.t1 NODE_3050_length_4446_cov_38.3067 AUGUSTUS exon 3666 4070 . - . ID=g1540.t1.exon1;Parent=g1540.t1 NODE_3050_length_4446_cov_38.3067 AUGUSTUS CDS 3666 4070 . - 0 ID=cds.g1540.t1;Parent=g1540.t1 NODE_3050_length_4446_cov_38.3067 AUGUSTUS exon 2085 3419 . - . ID=g1540.t1.exon2;Parent=g1540.t1 NODE_3050_length_4446_cov_38.3067 AUGUSTUS CDS 2085 3419 . - 0 ID=cds.g1540.t1;Parent=g1540.t1 #PROT g1540.t1 g1540 MAARQRRPPFWARRDSDEGVERVASARVTEDGDGSRRTSSAADDFESNDEPLPLPSRRVCHYNLGTGDVVWARLKRRSHAQTWWPAIVDDPLALVTKGSASSMPQTGPTASILVRYYGRHGARAWLPDEEIQPFKETYAYHCVNMTDDNFRSALSAACAAAGMDPPTVDGSDKVPSQGVVVGRQRTEADNNTFEYLMYNPVTLVYAWTPASELPEKMISAFELELPQSLRTKAGKLKPSQTNSTPPTSHARKRARQEKGDDDGADTGDVDRGMGANSSESNSSKRASKRAKKSKQTESVDASSTGDPSHPHSPPSAPPSPVDAPSRGHHPQHKTQAGDVDGSGAGAGKDGRRLAPKPPPPPAAQDRLIAPSPLRQASVGNPRVLFDRSSNPSDNSMFGTLSLSGGGGGSTGPRFGGAAPSPAGSGGFGLYPSFIPTEFDSRGFGIISPDPYPLLQMLVPILPSSRPSFTEQGADASGGAAKSGEGMTKKLTIKQAVPKGLRRTHPAEKVRSAVKGDDGASLLSAKDKDKVDTQATPPQAVSTMRVEARKSGSMNLTFMRSGPWGRLELTGADSANATKD* # ORIGINAL: g13435.t1 original gene structure, not modified by PASA NODE_2285_length_6857_cov_47.0405 AUGUSTUS gene 222 3560 . - . ID=g13435;Name=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS mRNA 222 3560 . - . ID=g13435.t1;Parent=g13435;Name=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 3495 3560 . - . ID=g13435.t1.exon1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 3495 3560 . - 0 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 3209 3337 . - . ID=g13435.t1.exon2;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 3209 3337 . - 0 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 2370 3114 . - . ID=g13435.t1.exon3;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 2370 3114 . - 0 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 1700 1883 . - . ID=g13435.t1.exon4;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 1700 1883 . - 2 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 1318 1472 . - . ID=g13435.t1.exon5;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 1318 1472 . - 1 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 552 612 . - . ID=g13435.t1.exon6;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 552 612 . - 2 ID=cds.g13435.t1;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 222 332 . - . ID=g13435.t1.exon7;Parent=g13435.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 222 332 . - 1 ID=cds.g13435.t1;Parent=g13435.t1 #PROT g13435.t1 g13435 MALKGKAALAKATATAKKGAAGAKKKDAKAKAVKATIAEIKQLESEEEKSIEHANNIADIITHTQSEEDEVVHAAIHSLHRIFRRHIKAGDLDPEKKKPTDAKATKRAKTDGDANASDADSADDADADGVEIDAARVAFRQWLRSQWQTFVATLERLLSHTQHGLRVPALKILMDCAVEQSQAAERRTAKHAFPVDLFGRIIHTLVCHPNLDLQLTAAFVDEYMRAYDDVRFFTLRALWKILDQRLKGDSASPAAAGQAKGKGKKAEKHLSMDVSLLVKNAFALLRDMNVPTKEDELTAFITGDPSFGYRAEVESEGRKKRKHDQVDDENDLAYLTDLAFIGKGPNKLKDLADDESDDGKVTKAKHPLLQLAAHRRVFSDAWLAFLRLPLGADMHKRVLLSLHKDVMPHMTRPRLLIDFLTDSYDMGGVVSVLALNSIFTLISQHNLDFPDFFRRFYALFDRNIFHVKYRARFFTLADLFLSS # PASA_UPDATE: g13436.t1, single gene model update, valid-1, status:[pasa:asmbl_3940,status:3], valid-1 NODE_2285_length_6857_cov_47.0405 . gene 3852 5837 . + . ID=g13436;Name=g13436.t1 NODE_2285_length_6857_cov_47.0405 . mRNA 3852 5837 . + . ID=g13436.t1;Parent=g13436;Name=g13436.t1 NODE_2285_length_6857_cov_47.0405 . five_prime_UTR 3852 3998 . + . ID=g13436.t1.utr5p1;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . exon 3852 4228 . + . ID=g13436.t1.exon1;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . CDS 3999 4228 . + 0 ID=cds.g13436.t1;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . exon 4377 5133 . + . ID=g13436.t1.exon2;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . CDS 4377 5133 . + 1 ID=cds.g13436.t1;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . exon 5656 5837 . + . ID=g13436.t1.exon3;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . CDS 5656 5760 . + 0 ID=cds.g13436.t1;Parent=g13436.t1 NODE_2285_length_6857_cov_47.0405 . three_prime_UTR 5761 5837 . + . ID=g13436.t1.utr3p1;Parent=g13436.t1 #PROT g13436.t1 g13436 MESGSGASIGRSLSPSFHSEIAESMSELEITDMEAGVDGDAGTVSITVDNTDAESALNYSTDSDSLPYLADSSFDENSARTCWVCFSGDEDDAGQLLWTQPCKCRGTTRWVHQACIQRWIDVKQGGATTAKVFCPQCRTEYVIECPEAGVFVLSMDLFDKIVNALSPFAALGVICSSVYVSALTYGGFTLCQVMGMEEGLQLMHRMEPVVLLASLPMIPFALVIPRFLRPTISISFGTQHDADGARHDDNPRADGANDGTAVDDARLAEAMVEGGVAQESDTPGAADVVERMPVSRAVVGALLLPSIAATLGQLFFRGRLASNFQRSIMGGLLFVVFKGTIRMYYKKQQRFLKTHRRVLDYVL* # ORIGINAL: g13437.t1 original gene structure, not modified by PASA NODE_2285_length_6857_cov_47.0405 AUGUSTUS gene 6132 6469 . - . ID=g13437;Name=g13437.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS mRNA 6132 6469 . - . ID=g13437.t1;Parent=g13437;Name=g13437.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 6297 6469 . - . ID=g13437.t1.exon1;Parent=g13437.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 6297 6469 . - 0 ID=cds.g13437.t1;Parent=g13437.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS exon 6132 6204 . - . ID=g13437.t1.exon2;Parent=g13437.t1 NODE_2285_length_6857_cov_47.0405 AUGUSTUS CDS 6132 6204 . - 1 ID=cds.g13437.t1;Parent=g13437.t1 #PROT g13437.t1 g13437 MRSPVHLQIRCDLKVLSLLSFNLLPDAEISSQTRNDDEAMRDDVRDMLVKYHLFSWEFVLLSRTLAFPDQYTYIRMPLQYH* # PASA_UPDATE: g13882.t1, single gene model update, valid-1, status:[pasa:asmbl_58,status:12], valid-1 NODE_1017_length_14651_cov_40.8869 . gene 7569 11828 . - . ID=g13882;Name=g13882.t1 NODE_1017_length_14651_cov_40.8869 . mRNA 7569 11828 . - . ID=g13882.t1;Parent=g13882;Name=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 11786 11828 . - . ID=g13882.t1.exon1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 11786 11828 . - 0 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 11393 11597 . - . ID=g13882.t1.exon2;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 11393 11597 . - 2 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 10890 11112 . - . ID=g13882.t1.exon3;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 10890 11112 . - 1 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 10094 10717 . - . ID=g13882.t1.exon4;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 10094 10717 . - 0 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 9688 9832 . - . ID=g13882.t1.exon5;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 9688 9832 . - 0 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 9346 9477 . - . ID=g13882.t1.exon6;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 9346 9477 . - 2 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 8833 9050 . - . ID=g13882.t1.exon7;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 8833 9050 . - 2 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 8394 8519 . - . ID=g13882.t1.exon8;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 8394 8519 . - 0 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . exon 7569 8183 . - . ID=g13882.t1.exon9;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . CDS 7914 8183 . - 0 ID=cds.g13882.t1;Parent=g13882.t1 NODE_1017_length_14651_cov_40.8869 . three_prime_UTR 7569 7913 . - . ID=g13882.t1.utr3p1;Parent=g13882.t1 #PROT g13882.t1 g13882 MAHDQYESDGSDDEALIKDLRADEPKFEDGVESIIVVDNVPKVPQDKEAKLVGVLAKIFAQFGELRADGIHLPRDDSANMSKGFAFVEYATPQEAARAIKQANGYKLDKQHVFEVTAFADIEKFSKIPEKYVEPEAKSYAEKDNLRSWLLNENCLDQFVTRFENKTDISWNARDGPESDYRRDNWTDTYVTWSPQGTYLTTLHRQGIALWGGQKWAQATRLSHHGVKLMDFSPCENYAVTWSNEAVDDPSDPQAVIVWDVRSGQKLRGFPTIRPEQWPVFKWSHDDKYVARMGEDAIAVYELPSMKLLDKKTIKIPSVREFSWSPSDNVISFWVPENDNNPARVTIMHIPSREERQVKNLFNVNDCKMHWQHNGDYLCVKVDRHTKTKKSTFTNFEFFRMREKGIPVDVLELKESIMAFAWEPCGPRFALIHGEAPRISVSFYSLEDEKKQSKVVLLRTLEKKTVNHLFWSPKGQYIVLAGLRNMNGALEFWDVNDMVCMNVGEHFMATDIEWDPTGRYICTSVSFWRHQMETGYALWSFQGRLLRKSNIDKFYQFLWRPRPKTLLSKEQIKNIKKNLKPYSAKFDRQDLLEANKLSREVIEKRTRMMEDWKDYRNRKFEDFEEDRPERMRLRDGWEESSESVVDDQETVEVFVKEEVSAA* # ORIGINAL: g13880.t1 original gene structure, not modified by PASA NODE_1017_length_14651_cov_40.8869 AUGUSTUS gene 702 4211 . + . ID=g13880;Name=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS mRNA 702 4211 . + . ID=g13880.t1;Parent=g13880;Name=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 702 2600 . + . ID=g13880.t1.exon1;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 702 2600 . + 0 ID=cds.g13880.t1;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 2799 2904 . + . ID=g13880.t1.exon2;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 2799 2904 . + 0 ID=cds.g13880.t1;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 3240 3355 . + . ID=g13880.t1.exon3;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 3240 3355 . + 2 ID=cds.g13880.t1;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 3603 3761 . + . ID=g13880.t1.exon4;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 3603 3761 . + 0 ID=cds.g13880.t1;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 3939 4211 . + . ID=g13880.t1.exon5;Parent=g13880.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 3939 4211 . + 0 ID=cds.g13880.t1;Parent=g13880.t1 #PROT g13880.t1 g13880 MDYEDFEYDDEDGDRRSRELEEELAAASRHGGASKGRGGGAQQQQQQHQQQKQKAVGSNPRGNNAAGNSNRLPNIGRAVGHASGAKGGATSKGVTQQPKGVTTHLPRISNNGGGQQQHNVADNGDGYEDYEEEQSAQRQNASYPPRTTFPSIARDIPQNRQQQQQQQQPQPQQQQGYGHGRGEVSQYGVSRDAALHFGPHGSQQQAEVYGQDWNGAGGVHPRYQQQQQLQQPQPQQQQLQAQQAIFRQEQQPSKFVPQPHFQPVQRPGYRAPPVTATFDTPLQHQLQSQMQTQSFYAGSLSGAPHAHPPSQQQQQLQHGYGGGSFVPHPQYASQTQPSAFVYAGAPDGVLATATYPPSQRSTSQNSYQSNSFRQTPTSKWGGGSMKGAPGQALPPQWASQQQQQQQQFQPVPVFNGPIYVPVNVGASMAVAAPMYAPQYPGGPALVLQQGLPPGAHVPMAQNYGPPLQQQQQQQQQRMHKVQPKGQSSRAAQKGIHAPRHQQQQQPQPQQQQRHPTNASPTPSVTSSHGIVYAAGSFIDGSIPNQFYGGAVYLANGAVVMGGGGGHVDAGFDGGAPPTQSLMSGVVAHGDQHNGELTLQEQMRQQQLREQQLYYEQQQAEAEADADNAWEDDPDAPRNKNGALPTIAEKRRFKRYIEPPKEKAEERERDLSMEYKPYTLKEYQQLERTPIKLGGLGPDKRSDQYLEKVEKTRKQKEYASKVRDLHMTSTIPAADPPAHPAAVVRKGISRSDELRQSKRDAMLQYAMSVPKPRVKPRQYHDNRSGEHDASDGSDEHGRDGTLAEEGEEFEEEGDGGEDDDDIANEQMLAVLAERHEHNKASAAAIRKELHL* # ORIGINAL: g13881.t1 original gene structure, not modified by PASA NODE_1017_length_14651_cov_40.8869 AUGUSTUS gene 5391 6616 . - . ID=g13881;Name=g13881.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS mRNA 5391 6616 . - . ID=g13881.t1;Parent=g13881;Name=g13881.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 5896 6616 . - . ID=g13881.t1.exon1;Parent=g13881.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 5896 6616 . - 0 ID=cds.g13881.t1;Parent=g13881.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 5391 5482 . - . ID=g13881.t1.exon2;Parent=g13881.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 5391 5482 . - 2 ID=cds.g13881.t1;Parent=g13881.t1 #PROT g13881.t1 g13881 MADTTIMAPTPQSVSLGSPATTSVEFKAPLPTQQQQQQQQQRRAVQQGGQSRRRIYSECVGGIAEEKNNGDAVKPVVKRRRHSVSAATCAADGPDSHGSSVSPAPPTTRRQRCRSGVSQSSTLADMDYCLNEYDSEDESNNGDWSGERRRSSCDLGALAAAADAMGDMDVCDDDEDGEKGSMMGRFYAARRAGDKESARQQHKANEQKRRNEIKDAFEGLKEHLPVLTNANSSKAEVLLHALQYIRQLQSREAEMETARSQLSAEVDELE* # ORIGINAL: g13883.t1 original gene structure, not modified by PASA NODE_1017_length_14651_cov_40.8869 AUGUSTUS gene 12607 14651 . + . ID=g13883;Name=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS mRNA 12607 14651 . + . ID=g13883.t1;Parent=g13883;Name=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 12607 13128 . + . ID=g13883.t1.exon1;Parent=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 12607 13128 . + 0 ID=cds.g13883.t1;Parent=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 13275 13628 . + . ID=g13883.t1.exon2;Parent=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 13275 13628 . + 0 ID=cds.g13883.t1;Parent=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS exon 13736 14651 . + . ID=g13883.t1.exon3;Parent=g13883.t1 NODE_1017_length_14651_cov_40.8869 AUGUSTUS CDS 13736 14651 . + 0 ID=cds.g13883.t1;Parent=g13883.t1 #PROT g13883.t1 g13883 MKKGKERRRKRGNDNAHSPTPGSVAISPVPGSSKTTKAAIETNVSIAPVIGGLSAHDAHSAPCVSWADLVLHEHLDAVHVGKFIEGLPALSVEFSLSILEPKFFMGAFPMRALLREQTVTLWNEIVAAFDKWGQTGRLSPYCMCLSAPSGMGKSYIAYVFAALARAHGWLVEYVGRADLIVKDGGAAKYLKMVVALNKKLLGEVMVTSGAEVGGVNYKGRPLLDLARVGIDHHTLADTALTELLNELQEWCKTPHIRIIDEHNAFWSAGDEDVRSWMPGWKQFFASFEALAGMRTFMVYSGSQHSQFEDCIPSGLHQCLRYIQPYSDDEFRVMQGLSTYPVALRAIEDEVAERTGLVPRELAVLVDTVSVLCAPSSDVSVSDCVRDWWDKSITLKRDRHAKYLASLSKKETRKFFNAVRQMLFAAVDNPYFSGAYRDRGLVFRRKSSANQPSSVRPVHEMARLVLLESLFSYGVPKDDILRMFREPLSKGTGGVCFEELVVRLFLSFGNDGVQTLEYVDQQGKNGGELIVPSLRDYIPLPRGTFVPRRQRWENRAVRFPPDFPRFDLLFDTSNCTVFIQVSIQTVSGHDRDTKELHL # ORIGINAL: g4694.t1 original gene structure, not modified by PASA NODE_2390_length_6445_cov_46.9692 AUGUSTUS gene 380 1081 . + . ID=g4694;Name=g4694.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS mRNA 380 1081 . + . ID=g4694.t1;Parent=g4694;Name=g4694.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS exon 380 504 . + . ID=g4694.t1.exon1;Parent=g4694.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS CDS 380 504 . + 2 ID=cds.g4694.t1;Parent=g4694.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS exon 980 1081 . + . ID=g4694.t1.exon2;Parent=g4694.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS CDS 980 1081 . + 0 ID=cds.g4694.t1;Parent=g4694.t1 #PROT g4694.t1 g4694 MISDKELVVNKFISVPKEMGNLNCAAFIGGIIEAILEGSNASARVTAHTTPKGTTILIKFDPAVMAREKALEGR* # ORIGINAL: g4696.t1 original gene structure, not modified by PASA NODE_2390_length_6445_cov_46.9692 AUGUSTUS gene 4431 5975 . + . ID=g4696;Name=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS mRNA 4431 5975 . + . ID=g4696.t1;Parent=g4696;Name=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS exon 4431 4639 . + . ID=g4696.t1.exon1;Parent=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS CDS 4431 4639 . + 0 ID=cds.g4696.t1;Parent=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS exon 4865 5025 . + . ID=g4696.t1.exon2;Parent=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS CDS 4865 5025 . + 1 ID=cds.g4696.t1;Parent=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS exon 5137 5975 . + . ID=g4696.t1.exon3;Parent=g4696.t1 NODE_2390_length_6445_cov_46.9692 AUGUSTUS CDS 5137 5975 . + 2 ID=cds.g4696.t1;Parent=g4696.t1 #PROT g4696.t1 g4696 MATRNRGPNPTAAAAAASVDVQVSSESRSIATKLLASMGADVSKVSPVVPIAASSGTGFTRGAQESRPARLGLGAKFLPHNKAAAAKDATAAKIEKKITTSVKRKSDEIDNEAQEVREKKRKADAKGKSVVGGGGDNDDDDDESESKARSVGPAKRPAPIDTRAPATAVSADATATGVNAAKNKRKRERRKLAKRDGAVSADVEKDVSETKLIAVGAPAVVENAFGAGVDDDSAAWSVVLPKGDAAKEVEAAWAKAGSFFKGESSVSAGVAATVHPVPVVNGQKQPKEQKTVIAKASSTVAVVAGARSSTPAHVAGKGDVSVAGTNNNYSNNNNNSKRPRGDDEEGAVAAGADGFTRGAKAPRTGGMGGHVKDVDGSDGAEHKRKKKRSKQKNLRKDNRPPEK # PASA_UPDATE: g4695.t1, single gene model update, valid-1, status:[pasa:asmbl_4205,status:12], valid-1 NODE_2390_length_6445_cov_46.9692 . gene 1565 4055 . - . ID=g4695;Name=g4695.t1 NODE_2390_length_6445_cov_46.9692 . mRNA 1565 4055 . - . ID=g4695.t1;Parent=g4695;Name=g4695.t1 NODE_2390_length_6445_cov_46.9692 . exon 4036 4055 . - . ID=g4695.t1.exon1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . CDS 4036 4055 . - 0 ID=cds.g4695.t1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . exon 3448 3520 . - . ID=g4695.t1.exon2;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . CDS 3448 3520 . - 1 ID=cds.g4695.t1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . exon 3005 3127 . - . ID=g4695.t1.exon3;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . CDS 3005 3127 . - 0 ID=cds.g4695.t1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . exon 2697 2875 . - . ID=g4695.t1.exon4;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . CDS 2697 2875 . - 0 ID=cds.g4695.t1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . exon 1565 2484 . - . ID=g4695.t1.exon5;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . CDS 2193 2484 . - 1 ID=cds.g4695.t1;Parent=g4695.t1 NODE_2390_length_6445_cov_46.9692 . three_prime_UTR 1565 2192 . - . ID=g4695.t1.utr3p1;Parent=g4695.t1 #PROT g4695.t1 g4695 MDDLQPRHSEEQANSPVRDRPSGNNGSSNDKGEPCSVLGFFGLSQFTTEDDLKAMCGVHGHVQSIELIRDKATGRSKCFGFVTMETTEGAIAAKTALSGTVVNSRTIRVDYSMTKKAHDPTPGYYHGIPTNKLRARDHPSASSSRRHSRSRSRSPRRSSGGGGRDRYRSRSPPRRRSPGRYDRDRERDHRDSRDSRRPRSRSPPRSYGRDRRDSGGSRRSRSRSPRRR* # ORIGINAL: g3771.t1 original gene structure, not modified by PASA NODE_7487_length_433_cov_150.332 AUGUSTUS gene 168 433 . - . ID=g3771;Name=g3771.t1 NODE_7487_length_433_cov_150.332 AUGUSTUS mRNA 168 433 . - . ID=g3771.t1;Parent=g3771;Name=g3771.t1 NODE_7487_length_433_cov_150.332 AUGUSTUS exon 349 433 . - . ID=g3771.t1.exon1;Parent=g3771.t1 NODE_7487_length_433_cov_150.332 AUGUSTUS CDS 349 433 . - 1 ID=cds.g3771.t1;Parent=g3771.t1 NODE_7487_length_433_cov_150.332 AUGUSTUS exon 168 248 . - . ID=g3771.t1.exon2;Parent=g3771.t1 NODE_7487_length_433_cov_150.332 AUGUSTUS CDS 168 248 . - 0 ID=cds.g3771.t1;Parent=g3771.t1 #PROT g3771.t1 g3771 IPKAICDEQIQFNAGATSPDQRLDGIHYDIEPHTLGAIWRTNAAGGKDNYNNELE # PASA_UPDATE: g10104.t1, single gene model update, valid-1, status:[pasa:asmbl_6238,status:12], valid-1 NODE_3578_length_3163_cov_44.3902 . gene 200 1487 . - . ID=g10104;Name=g10104.t1 NODE_3578_length_3163_cov_44.3902 . mRNA 200 1487 . - . ID=g10104.t1;Parent=g10104;Name=g10104.t1 NODE_3578_length_3163_cov_44.3902 . five_prime_UTR 1273 1487 . - . ID=g10104.t1.utr5p1;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . five_prime_UTR 941 1032 . - . ID=g10104.t1.utr5p2;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . exon 1273 1487 . - . ID=g10104.t1.exon1;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . exon 918 1032 . - . ID=g10104.t1.exon2;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . CDS 918 940 . - 0 ID=cds.g10104.t1;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . exon 720 806 . - . ID=g10104.t1.exon3;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . CDS 720 806 . - 1 ID=cds.g10104.t1;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . exon 200 491 . - . ID=g10104.t1.exon4;Parent=g10104.t1 NODE_3578_length_3163_cov_44.3902 . CDS 200 491 . - 1 ID=cds.g10104.t1;Parent=g10104.t1 #PROT g10104.t1 g10104 MALNTAGRFGDLALETLYTILEKMDADSLTRLALTCRPLQCAVMRFLLHGPLDVTGAPFAQLWRLESTTVGKNGVHSVAAAVRASVCIAGGSVRNVTIAHIVAAVNIVDQDRGMEWRVLKSVCLSVCGTRTHY* # ORIGINAL: g10105.t1 original gene structure, not modified by PASA NODE_3578_length_3163_cov_44.3902 AUGUSTUS gene 1982 3078 . + . ID=g10105;Name=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS mRNA 1982 3078 . + . ID=g10105.t1;Parent=g10105;Name=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS exon 1982 2141 . + . ID=g10105.t1.exon1;Parent=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS CDS 1982 2141 . + 0 ID=cds.g10105.t1;Parent=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS exon 2414 2541 . + . ID=g10105.t1.exon2;Parent=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS CDS 2414 2541 . + 2 ID=cds.g10105.t1;Parent=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS exon 2797 3078 . + . ID=g10105.t1.exon3;Parent=g10105.t1 NODE_3578_length_3163_cov_44.3902 AUGUSTUS CDS 2797 3078 . + 0 ID=cds.g10105.t1;Parent=g10105.t1 #PROT g10105.t1 g10105 MQRIQAKPKRRTNRPGRIVDLAKYPQRLQLYKVPPNEEITMETFEDLAIERVKLLRAVEVASIRYPKKNADYEALMREAVKKHMPLSELREGNEEVCHEERRRDHFSHFILRLAYCRTEDLRRWMLKQETDLFRHRLSTENSREIGDFLASSGLKYVPIGTDKKDVLHDKLRAAGAFLSDDDVDKEDYFS # ORIGINAL: g7126.t1 original gene structure, not modified by PASA NODE_3726_length_2883_cov_74.68 AUGUSTUS gene 928 2777 . + . ID=g7126;Name=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS mRNA 928 2777 . + . ID=g7126.t1;Parent=g7126;Name=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS exon 928 1416 . + . ID=g7126.t1.exon1;Parent=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS CDS 928 1416 . + 0 ID=cds.g7126.t1;Parent=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS exon 1886 1946 . + . ID=g7126.t1.exon2;Parent=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS CDS 1886 1946 . + 0 ID=cds.g7126.t1;Parent=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS exon 2659 2777 . + . ID=g7126.t1.exon3;Parent=g7126.t1 NODE_3726_length_2883_cov_74.68 AUGUSTUS CDS 2659 2777 . + 2 ID=cds.g7126.t1;Parent=g7126.t1 #PROT g7126.t1 g7126 MEVNKDEAQRCIDLGRRMFAERNYVRAEKFIRKSISLYPIDGAEVLLEITLNKMRAASEAPTEASDASEPPRQHRSFSASSSSSTAGGAGSGAGQGEPSLRRRTSPSRAAASAGAASSVTTADAGTPEQKEAVKRIRDCKTLYDVLGLKKDCTEADVRKQYKKLALQFHPDKNKAKGADEAFKRISKAFTVLSSTEKREEYDRFGESSPGIASTANNGWSRC* # PASA_UPDATE: g6987.t1, single gene model update, valid-1, status:[pasa:asmbl_6324,status:12], valid-1 NODE_3626_length_3090_cov_47.8551 . gene 2538 3090 . - . ID=g6987;Name=g6987.t1 NODE_3626_length_3090_cov_47.8551 . mRNA 2538 3090 . - . ID=g6987.t1;Parent=g6987;Name=g6987.t1 NODE_3626_length_3090_cov_47.8551 . five_prime_UTR 3090 3090 . - . ID=g6987.t1.utr5p1;Parent=g6987.t1 NODE_3626_length_3090_cov_47.8551 . exon 2538 3090 . - . ID=g6987.t1.exon1;Parent=g6987.t1 NODE_3626_length_3090_cov_47.8551 . CDS 2637 3089 . - 0 ID=cds.g6987.t1;Parent=g6987.t1;5_prime_partial=true NODE_3626_length_3090_cov_47.8551 . three_prime_UTR 2538 2636 . - . ID=g6987.t1.utr3p1;Parent=g6987.t1 #PROT g6987.t1 g6987 VDLIIAIDAGSDTAQNLPNGKAIVNAAAYAGEFARPFPAVPTMAQFNDASSQLLNKTTFFGCGDASVPTIVYIPNRFVTYDATAMPATLQLSYEQQQIDQLLMNAFATTTGFVNQPTLAKAIGCAVLDAGAQPLPQGCTDIDWTSYCWKK* # PASA_UPDATE: g6986.t1, single gene model update, valid-1, status:[pasa:asmbl_6325,status:12], valid-1 NODE_3626_length_3090_cov_47.8551 . gene 1 1972 . - . ID=g6986;Name=g6986.t1 NODE_3626_length_3090_cov_47.8551 . mRNA 1 1972 . - . ID=g6986.t1;Parent=g6986;Name=g6986.t1 NODE_3626_length_3090_cov_47.8551 . five_prime_UTR 1936 1972 . - . ID=g6986.t1.utr5p1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 1684 1972 . - . ID=g6986.t1.exon1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 1684 1935 . - 0 ID=cds.g6986.t1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 1198 1468 . - . ID=g6986.t1.exon2;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 1198 1468 . - 0 ID=cds.g6986.t1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 929 1061 . - . ID=g6986.t1.exon3;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 929 1061 . - 2 ID=cds.g6986.t1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 623 803 . - . ID=g6986.t1.exon4;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 623 803 . - 1 ID=cds.g6986.t1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 304 385 . - . ID=g6986.t1.exon5;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 304 385 . - 0 ID=cds.g6986.t1;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . exon 1 70 . - . ID=g6986.t1.exon6;Parent=g6986.t1 NODE_3626_length_3090_cov_47.8551 . CDS 1 70 . - 2 ID=cds.g6986.t1;Parent=g6986.t1;3_prime_partial=true #PROT g6986.t1 g6986 MLSALARGVGRPSVACAAVHQARGFASTPSKAAGGLLVNEFSFLKDLGITEENDGVFNGKWGGKGNVVETVNPANNRPIARVREGTVQEYHESIKIAREAWKDWAEVPSPVRGEIVRQIGDALRANRDSLGRLVSLEMGKILPEGWGEVQEYIDICDYAVGLSRIMSGKIIPSERPGHALQEHWHPLGVVGVISAFNFPVAVYGWNNAIAMIGGNVCLWKPAPTVALSAIAVTRIIQGVLDRNKLPGAIATLVCGGADVGKAMADDRNVNVLSFTGSTAIGREVNVAVQRRFGRSIMELGGNNALVVMDDADIELAVRSVLFAAVGTAG # PASA_UPDATE: g1193.t1, single gene model update, valid-1, status:[pasa:asmbl_4878,status:12], valid-1 NODE_2714_length_5366_cov_37.078 . gene 3498 5284 . + . ID=g1193;Name=g1193.t1 NODE_2714_length_5366_cov_37.078 . mRNA 3498 5284 . + . ID=g1193.t1;Parent=g1193;Name=g1193.t1 NODE_2714_length_5366_cov_37.078 . five_prime_UTR 3498 3613 . + . ID=g1193.t1.utr5p1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . exon 3498 3805 . + . ID=g1193.t1.exon1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . CDS 3614 3805 . + 0 ID=cds.g1193.t1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . exon 3982 4109 . + . ID=g1193.t1.exon2;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . CDS 3982 4109 . + 0 ID=cds.g1193.t1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . exon 4301 4644 . + . ID=g1193.t1.exon3;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . CDS 4301 4644 . + 1 ID=cds.g1193.t1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . exon 4876 5076 . + . ID=g1193.t1.exon4;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . CDS 4876 5076 . + 2 ID=cds.g1193.t1;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . exon 5203 5284 . + . ID=g1193.t1.exon5;Parent=g1193.t1 NODE_2714_length_5366_cov_37.078 . CDS 5203 5284 . + 2 ID=cds.g1193.t1;Parent=g1193.t1;3_prime_partial=true #PROT g1193.t1 g1193 MRAAVFASLLAMLCAVTFAAKPIPLVFTPITTNAPQQLHVSLGSDPSQIVVRWITTTNASSTLKVGTKSGNYGSVFQGTAPTTYSVSGYKSGFIHFAVATGLTPATTYYYVCGSDDGGYSAEHHFSTAPGSDVPVVIGVIGDLGTTDHSNATVYGLMGDPAGLHLVMHVGDLSYANDDEKYWDFYGSLVEPVSSNVPWMVAAGNHENYYSFAAYKNRFQMPSATGAGGNFYYSFDYSFVHFVILSTETDYSASSAQFKWVVGDLASVDRKATPWVILVWHRPVYNSNTAHEGEGDEFKSIYEDTLFKYKVDIVLC # ORIGINAL: g1192.t1 original gene structure, not modified by PASA NODE_2714_length_5366_cov_37.078 AUGUSTUS gene 328 2242 . + . ID=g1192;Name=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS mRNA 328 2242 . + . ID=g1192.t1;Parent=g1192;Name=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS exon 328 426 . + . ID=g1192.t1.exon1;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS CDS 328 426 . + 0 ID=cds.g1192.t1;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS exon 721 858 . + . ID=g1192.t1.exon2;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS CDS 721 858 . + 0 ID=cds.g1192.t1;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS exon 1530 1714 . + . ID=g1192.t1.exon3;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS CDS 1530 1714 . + 0 ID=cds.g1192.t1;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS exon 2101 2242 . + . ID=g1192.t1.exon4;Parent=g1192.t1 NODE_2714_length_5366_cov_37.078 AUGUSTUS CDS 2101 2242 . + 1 ID=cds.g1192.t1;Parent=g1192.t1 #PROT g1192.t1 g1192 MISLSRRDVSQYLDILRHSEGFVVKVNDGALEKYAVSIERVVRVLREGVIESSINGRFGPLSRRLFRLIKIHGHLEQKQVADLAMVPSKEAKERLYHMLRANFLQLQEISKTPDHAPSRTFFLWTVDTHHLTRMLTCFCLREHGNIRARQAMALQSTAGDASIKSTLDLLCARDLDTDSTLMILRDF* # ORIGINAL: g8420.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 4071 12704 . - . ID=g8420;Name=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 4071 12704 . - . ID=g8420.t1;Parent=g8420;Name=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 12559 12704 . - . ID=g8420.t1.exon1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 12559 12704 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 12236 12411 . - . ID=g8420.t1.exon2;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 12236 12411 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 12014 12108 . - . ID=g8420.t1.exon3;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 12014 12108 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 11661 11760 . - . ID=g8420.t1.exon4;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 11661 11760 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 11215 11273 . - . ID=g8420.t1.exon5;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 11215 11273 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 10963 11050 . - . ID=g8420.t1.exon6;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 10963 11050 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 10370 10508 . - . ID=g8420.t1.exon7;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 10370 10508 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 10053 10170 . - . ID=g8420.t1.exon8;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 10053 10170 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 9634 9761 . - . ID=g8420.t1.exon9;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 9634 9761 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 9305 9430 . - . ID=g8420.t1.exon10;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 9305 9430 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 8964 9113 . - . ID=g8420.t1.exon11;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 8964 9113 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 8658 8762 . - . ID=g8420.t1.exon12;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 8658 8762 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 8154 8501 . - . ID=g8420.t1.exon13;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 8154 8501 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 7717 7831 . - . ID=g8420.t1.exon14;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 7717 7831 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 7330 7506 . - . ID=g8420.t1.exon15;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 7330 7506 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 6878 7086 . - . ID=g8420.t1.exon16;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 6878 7086 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 6196 6695 . - . ID=g8420.t1.exon17;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 6196 6695 . - 1 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 5780 5869 . - . ID=g8420.t1.exon18;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 5780 5869 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 5381 5515 . - . ID=g8420.t1.exon19;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 5381 5515 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 4856 5167 . - . ID=g8420.t1.exon20;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 4856 5167 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 4368 4498 . - . ID=g8420.t1.exon21;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 4368 4498 . - 2 ID=cds.g8420.t1;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 4071 4160 . - . ID=g8420.t1.exon22;Parent=g8420.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 4071 4160 . - 0 ID=cds.g8420.t1;Parent=g8420.t1 #PROT g8420.t1 g8420 MGRSLCTSLLLVSLAVVVCNIGSAHALFSCNLTAGGLHYDLSTLGRNAGEEWEINGVVDQHGNSYFFRINPCLPTLDKNAAAIAYETDLGVPLPQGQFDNVEVKVTTSTVLTVIYHSNVLCDGKRFRQTEVKFLCDGGRAAAPEVTDSYDGCYLTLEWVDPAACPIVHSDDADTTTPCAISDYVGMYLPCNKTSNTRTAVYYLSGKCNPSNKASVSQPSPATTGCSLCTPGHYSPGPGAAYTNFDALPPGFFTICEQKDSRRTTACDTWRPTEDGTGLYSGDNRLEHNIVSTLVHSAHFVLPGKTNKIVFEYAVDAERCPTVKCDGFSFKIDEAEVLPFVSAGAGTFSQWLAPGLHTFKWQFSKDETQSAGLDTAVIRRIEVIGTTFATEDRCALCAPGSYTGNYNASTCDKCDWFTSANAYGSTQCKPCGMGTFAPPGAKSCDPMRPCTASDYALLYTQCTVGLPGHEPFRSRYFQSIKPPVSPRILCDDRNYPLPQLTIDDENLPCECELGQYLDVGNGTVHPVCRSCGVGQYNTDPMGRTCARCKAGTAAQKGLFVTRWEEKLRAPFQTFCVGDCLGFDGGWIGIGSALSSGMYFGSFDSVLHFETSLPNGGVLSFDYTLNCGTASKEDCTLRVVDINSTDFNEYVLTGAAVNPNAMRHMTIVLPPDDHIILVQMHQADPSKTQVYEARIYGLNVTGIPSGGGIGCERCPAGTYAPDASDVCTPCPPGTFSAAGSAACRPCEDGYFARDPGSAECIKCGESTWALPNRTDCATDCRLLAGPGVVYDLSPLSDPENMHFAGTEGDRRFWINVCTYHHTNTSCYDSRGIPVATFACQESLNHGFAYDVGSVLSLLPLTEDADLMDNGFMTGGGHEHAGGAVEITVRSGVLMRLSNGDRGCAGTYGGVPTPRETNVTLLCDLDAGAGSPVPIENTTAEHPPHSCRYHFVWRSMYACPLCTKTDFRPELGACADGRRERIFVPVRPCWGGSKPGSEGSVSCDNMLSSLTIAGKQVDIGAFDSSYVAGTNTDAGVVYLGPYPYTTTDVAIVANPRDGAARADVFGQSLVSGVARTFTVHSGNNTLPLRLTAEDGTQRTYGVVVVVDAAPVPSGPTVPIPAIVVAGVCFLAIVGVAAVFWYKHRVLRYKFYKSVGQATELTDFEQSQLDNQSLGLDDLDEH* # ORIGINAL: g8427.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 30559 31642 . - . ID=g8427;Name=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 30559 31642 . - . ID=g8427.t1;Parent=g8427;Name=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 31568 31642 . - . ID=g8427.t1.exon1;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 31568 31642 . - 0 ID=cds.g8427.t1;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 31349 31429 . - . ID=g8427.t1.exon2;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 31349 31429 . - 0 ID=cds.g8427.t1;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 31089 31201 . - . ID=g8427.t1.exon3;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 31089 31201 . - 0 ID=cds.g8427.t1;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 30559 30640 . - . ID=g8427.t1.exon4;Parent=g8427.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 30559 30640 . - 1 ID=cds.g8427.t1;Parent=g8427.t1 #PROT g8427.t1 g8427 MSWEALAYIMAVIISAILLFVMVFVIICVSDLECEYINIFRFRELFNKASFVVTLPEYLVHAALTAILCVNGQWFGVVLNIPLLAFHIQRMIVALLDDDSDVPTKIVLPAGDSVLS* # ORIGINAL: g8424.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 22683 24053 . - . ID=g8424;Name=g8424.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 22683 24053 . - . ID=g8424.t1;Parent=g8424;Name=g8424.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 22683 24053 . - . ID=g8424.t1.exon1;Parent=g8424.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 22683 24053 . - 0 ID=cds.g8424.t1;Parent=g8424.t1 #PROT g8424.t1 g8424 MSRAAFVPLSLVLLLAWTVSANPAYTCSTVRLTSGKATSRSYTGVYTSLSPTARVDAVLRRASPSDACRTVQPQNSSWVALVDFCGNDLCSTETKISNAAAAGAMGVILANCELTKDIPLLVTMKFSSTPSVSVSGNTGSILKDLLANLDDTYRATIEPDLSCDQQRVMSPTWLLYTGVVLLIICIGSLLAVAFYFIYRRRYMRARRVRIVVQKRPSPALIDAVRRIPTITIGEDASHTARYGTDTCAVCLEEYENGQVASVLECGHIFHSACVTTWLVSHGTCPLCKAEVMRSLLGDADMWTTVLESAGGNGNAEPTAAQAVAVLHEAGLLHIDMPTRTTRGTTSQSAVVETMSPSIIAAVVASNAQGSTTVEMVDLSPEARRRRGNDEQPRTPPGNAWTTTSELTSVHTHVSPRMSAVSDVSDANFPRASMVGITDDDDDIDVEIIGEVRVVPN* # PASA_UPDATE: g8428.t1, single gene model update, valid-1, status:[pasa:asmbl_1439,status:12], valid-1 NODE_138_length_35754_cov_41.7189 . gene 32670 34582 . + . ID=g8428;Name=g8428.t1 NODE_138_length_35754_cov_41.7189 . mRNA 32670 34582 . + . ID=g8428.t1;Parent=g8428;Name=g8428.t1 NODE_138_length_35754_cov_41.7189 . exon 32670 34032 . + . ID=g8428.t1.exon1;Parent=g8428.t1 NODE_138_length_35754_cov_41.7189 . CDS 32670 33773 . + 0 ID=cds.g8428.t1;Parent=g8428.t1 NODE_138_length_35754_cov_41.7189 . exon 34339 34582 . + . ID=g8428.t1.exon2;Parent=g8428.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 33774 34032 . + . ID=g8428.t1.utr3p1;Parent=g8428.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 34339 34582 . + . ID=g8428.t1.utr3p2;Parent=g8428.t1 #PROT g8428.t1 g8428 MATPLVMRAVEARALAPAGCRSLMTAKVKLSVRSQIKLANELEGFAGIRSTRGLRDYNEDRCCVAQLGPETYFFGVFDGHGGSMASDFCTKNLHWNVHAHLQSGKTLRGALEAAIADTDDDFCAIAMRKEQERVGTTVLVALLSGDQLCVANVGDSIAYLCTNGVTRRVSDLHKPDVPAERERIMASGGEVTKYDVPRVMGSLSMSRALGDIAFRRFGVIAEPFIFETRVTAADQFLLLTSDGLTDVLSESRMTDVVRDCATPEKAAVDLAHAAEVERTEDNTTALIVRLPGWSTMKKAAPPPKKAARYSIENAFGGRRVDFGKLLQMIDRHLPKDISADEVQKELERCVLADAVRCARLLHACAAA* # PASA_UPDATE: g8422.t1, single gene model update, valid-1, status:[pasa:asmbl_1442,status:12], valid-1 NODE_138_length_35754_cov_41.7189 . gene 14932 18006 . - . ID=g8422;Name=g8422.t1 NODE_138_length_35754_cov_41.7189 . mRNA 14932 18006 . - . ID=g8422.t1;Parent=g8422;Name=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 17818 18006 . - . ID=g8422.t1.exon1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 17818 18006 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 17566 17655 . - . ID=g8422.t1.exon2;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 17566 17655 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 17382 17441 . - . ID=g8422.t1.exon3;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 17382 17441 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 17019 17171 . - . ID=g8422.t1.exon4;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 17019 17171 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 16766 16896 . - . ID=g8422.t1.exon5;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 16766 16896 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 16336 16459 . - . ID=g8422.t1.exon6;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 16336 16459 . - 1 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 15923 16068 . - . ID=g8422.t1.exon7;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 15923 16068 . - 0 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . exon 14932 15675 . - . ID=g8422.t1.exon8;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . CDS 15330 15675 . - 1 ID=cds.g8422.t1;Parent=g8422.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 14932 15329 . - . ID=g8422.t1.utr3p1;Parent=g8422.t1 #PROT g8422.t1 g8422 MDSFGLKSSNAANDWKKVGPSPYDPSIIGQIDMLALEAVSKFSPQLGNVLQDIVRLLGTQVEKTSRLEREVQQRDALIKTFERDIDNLKDIVKDVQRQDVLIKELQGSVADIKSEVLTIKTVISTIDVDFQASMQQKLQATFSTVDSLEKRVKFMDGDTLKYTVDDIKKRMGDVGEAVKQITRLMAQTKKHDKEIVGVMKQIENFNLGFANLSAKAAERNYCDKRFDEILGQMGKMYQYAKKEDLDKLKLQMMAAEFSPLALGDVGTGTAAAGRRHYRCLTCDRVTPTLAGAQTEAFRMETSSGDTVVATRGREVGLFGEDGHVYKGSEDVMVLRASTQSPSPPDSPNASRRTKVARPKSAHQSRASMVEAVDGSAATTYVQQTALASGTGGGSTGKLQRPKSAYAKISRVT* # PASA_UPDATE: g8421.t1, single gene model update, valid-1, status:[pasa:asmbl_1438,status:3], valid-1 NODE_138_length_35754_cov_41.7189 . gene 13108 14816 . + . ID=g8421;Name=g8421.t1 NODE_138_length_35754_cov_41.7189 . mRNA 13108 14816 . + . ID=g8421.t1;Parent=g8421;Name=g8421.t1 NODE_138_length_35754_cov_41.7189 . five_prime_UTR 13108 13193 . + . ID=g8421.t1.utr5p1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . exon 13108 13487 . + . ID=g8421.t1.exon1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . CDS 13194 13487 . + 0 ID=cds.g8421.t1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . exon 13749 13758 . + . ID=g8421.t1.exon2;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . CDS 13749 13758 . + 0 ID=cds.g8421.t1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . exon 13885 14027 . + . ID=g8421.t1.exon3;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . CDS 13885 14027 . + 2 ID=cds.g8421.t1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . exon 14198 14314 . + . ID=g8421.t1.exon4;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . CDS 14198 14314 . + 0 ID=cds.g8421.t1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . exon 14574 14816 . + . ID=g8421.t1.exon5;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . CDS 14574 14714 . + 0 ID=cds.g8421.t1;Parent=g8421.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 14715 14816 . + . ID=g8421.t1.utr3p1;Parent=g8421.t1 #PROT g8421.t1 g8421 MNRLAIIEGHLSHSQHPTSTHSAAQANTPSAPTASRVEMAGAARALGKIAAGSTCFFLCDMQEAFRPSIKYYPEIIAVAQRMLSASHSLKVPTIVTEQYPKGLGKTVSELDVTGIPVFSKTKFSMLTNEVLDKMKDLAEVKSVVLFGIESHVCVLQTCMDLLGHGFDVHILVDGVSSRSMIDRGVALERMKQSGAFLTTSESLLFQLMGDARHPGFKDIQSLVKSPYPQIPLFP* # ORIGINAL: g8425.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 25716 27431 . + . ID=g8425;Name=g8425.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 25716 27431 . + . ID=g8425.t1;Parent=g8425;Name=g8425.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 25716 27431 . + . ID=g8425.t1.exon1;Parent=g8425.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 25716 27431 . + 0 ID=cds.g8425.t1;Parent=g8425.t1 #PROT g8425.t1 g8425 MHQQHQSLLSSLGGEAAPLSSRMPHSPVNISYTSNGSYHMGSAAPSSTHYGMLNGMKGEGGSVHMGLMSGPGAVPLQSASSPQQYNGYASGGGLAQSQYSQFGAQTSASTPTMNQMLAHQAMINRQTLVNQQHQQQAQDAKKRGSGPVNNNLYKTELCHSFQETGYCKYKDKCQFAHGRTELRQLARHPKYKTSLCRTYHTVGTCPYGTRCHFIHSLEEMQVHQPAVAPMMPVHFMQQQQQQQQQQQQQHQQHSQAQSQHAHAALNMNGIDIAQQFAGLSLAGGGQSNGIPQDQNGPLFGQQQQQQQQQQLYMPANYGGDNQRRQQFVPQNSSSYAYPPGHMTPAQHIAQNVLGGSGFADAPSAAARADGHSRDNYSGIYGSPSATVDMYRGSNLFWGDGMQAGVPQSTSPTSTQNTHQFGSIGDASRGMQQSASSRLSPIGRSNDGLSEDSPTRQDVNGQGQSFRSDYPKGGVLADSADLYHPTSDIAERQLKFSPGNGSTKTNGVASAGSDKMPAVAGDRHGRPGSDDTQIWSSPAKSVNAISAESSSATSAAISKRLPIFHTLAEPVV* # PASA_UPDATE: g8419.t1, single gene model update, valid-1, status:[pasa:asmbl_1440,status:12], valid-1 NODE_138_length_35754_cov_41.7189 . gene 2438 3988 . + . ID=g8419;Name=g8419.t1 NODE_138_length_35754_cov_41.7189 . mRNA 2438 3988 . + . ID=g8419.t1;Parent=g8419;Name=g8419.t1 NODE_138_length_35754_cov_41.7189 . five_prime_UTR 2438 2472 . + . ID=g8419.t1.utr5p1;Parent=g8419.t1 NODE_138_length_35754_cov_41.7189 . exon 2438 3988 . + . ID=g8419.t1.exon1;Parent=g8419.t1 NODE_138_length_35754_cov_41.7189 . CDS 2473 3546 . + 0 ID=cds.g8419.t1;Parent=g8419.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 3547 3988 . + . ID=g8419.t1.utr3p1;Parent=g8419.t1 #PROT g8419.t1 g8419 MHASRMCVRLVAPGGCVFPRATFGRSAGRLSPLLTFVSNAASASPFASGRRLLPCSPTIAVGRGSRLTHSITDATKGVDNLAHKTIDRLHEIDNKFKFRGYSTLKIGSAFVGAAVLYIYIFKEDIKDNLSTEVADVASRSLGDESVVQRAEEVSKAVLQQVIRDPSTLANASSFVVQISQEPTTQAALVALLKGVLADPEAMARVNEFVQHIVADLLKDTATMGRTVEFVQSLMAQEGTKESLSTLFRWLLTDPSFQHTATLLLKDVIASKEIVDQTAVLAIQVTHTVLDDTDVQDHAQQFIGHVLTDEAIHKHGGDAIWEAIKYSVTPTWLGGDPKSQMPTTSHDILPPNAKVMSE* # ORIGINAL: g8429.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 34786 35315 . - . ID=g8429;Name=g8429.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 34786 35315 . - . ID=g8429.t1;Parent=g8429;Name=g8429.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 35201 35315 . - . ID=g8429.t1.exon1;Parent=g8429.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 35201 35315 . - 0 ID=cds.g8429.t1;Parent=g8429.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 34786 34988 . - . ID=g8429.t1.exon2;Parent=g8429.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 34786 34988 . - 2 ID=cds.g8429.t1;Parent=g8429.t1 #PROT g8429.t1 g8429 MSPGHFNGAVQAIGGWDETQVSNWLVANGLGEYEALFKSNEITGELLLDLDHDTLKSMGIASAGRRMRVLRVVGALKSYLVHDLASVASAAVLGAGPTETSPVSK* # ORIGINAL: g8418.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 81 1519 . - . ID=g8418;Name=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 81 1519 . - . ID=g8418.t1;Parent=g8418;Name=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 1031 1519 . - . ID=g8418.t1.exon1;Parent=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 1031 1519 . - 0 ID=cds.g8418.t1;Parent=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 535 795 . - . ID=g8418.t1.exon2;Parent=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 535 795 . - 0 ID=cds.g8418.t1;Parent=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 81 317 . - . ID=g8418.t1.exon3;Parent=g8418.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 81 317 . - 0 ID=cds.g8418.t1;Parent=g8418.t1 #PROT g8418.t1 g8418 MVVGGAPVAKSTFKDREKPDEVRASNITAAKGVADAVRTSLGPRGMDKMIQAPNGEVTITNDGATILKQMQVLHPAAKMLVELSKAQDVEAGDGTTSVVVICGALLNAAQKLLDRGIHPTTISESFQLAVDKAVEILTRMSHPVELSDRESLLKSATTSLNSKVVSQYSNLLAPIAVDAVLHVIDPKTSVNVDLRDIRVVKKLGGTIEDCELVDGLVFTQRVAHVAGGVTRQEKAKIGLIQFCLSAPKTDMENTVIVSDYSQMDRVLREERQYILELVKKIKKAGCNVLLVQKSILRDAVNDLALHFLAKMKIMVITEIERDEIEFICK # ORIGINAL: g8426.t1 original gene structure, not modified by PASA NODE_138_length_35754_cov_41.7189 AUGUSTUS gene 28905 29755 . + . ID=g8426;Name=g8426.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS mRNA 28905 29755 . + . ID=g8426.t1;Parent=g8426;Name=g8426.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 28905 28923 . + . ID=g8426.t1.exon1;Parent=g8426.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 28905 28923 . + 0 ID=cds.g8426.t1;Parent=g8426.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS exon 29010 29755 . + . ID=g8426.t1.exon2;Parent=g8426.t1 NODE_138_length_35754_cov_41.7189 AUGUSTUS CDS 29010 29755 . + 2 ID=cds.g8426.t1;Parent=g8426.t1 #PROT g8426.t1 g8426 MPVLRRLRASKRPLAWDDEETDSAQHTSTNDASSPAVELLTISHKKFCEGTGTPRGRNLRRAILISNAVRVLQQRTEEPVEDDDNNSMDEFATDQDAHLTDLEPDHRGPSPKKRRIEGGLCGSQEPLLNVDLNIPYSHFHLPSDDAHRLDFDLESELSQVVPCDGSTTWSLQADPTAAAAAAAESGCNADEHLNSASEDAWQVLDLVASTDTDDEQPETRSPSPLAEDDGDTTSKVVECFSESRVLVHNVLCCI* # PASA_UPDATE: g8423.t1, single gene model update, valid-1, status:[pasa:asmbl_1437,status:12], valid-1 NODE_138_length_35754_cov_41.7189 . gene 18813 19993 . - . ID=g8423;Name=g8423.t1 NODE_138_length_35754_cov_41.7189 . mRNA 18813 19993 . - . ID=g8423.t1;Parent=g8423;Name=g8423.t1 NODE_138_length_35754_cov_41.7189 . five_prime_UTR 19944 19993 . - . ID=g8423.t1.utr5p1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 19941 19993 . - . ID=g8423.t1.exon1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 19941 19943 . - 0 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 19727 19820 . - . ID=g8423.t1.exon2;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 19727 19820 . - 0 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 19512 19611 . - . ID=g8423.t1.exon3;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 19512 19611 . - 2 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 19282 19364 . - . ID=g8423.t1.exon4;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 19282 19364 . - 1 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 19077 19150 . - . ID=g8423.t1.exon5;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 19077 19150 . - 2 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . exon 18813 18962 . - . ID=g8423.t1.exon6;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . CDS 18891 18962 . - 0 ID=cds.g8423.t1;Parent=g8423.t1 NODE_138_length_35754_cov_41.7189 . three_prime_UTR 18813 18890 . - . ID=g8423.t1.utr3p1;Parent=g8423.t1 #PROT g8423.t1 g8423 MSKLEVCEVDPEVIALLRKFRFRKEKNTAAIVLKIDPKELKVVLDEEFQDVTIEDVAKELPEAFPRYVIYSFPHNHGDGRISYPMLFIFVSPSGTKPDLQMMYSGTKTTLVKHIEVTKVFEIRNTDELTQEWLDEKLAYFK* # ORIGINAL: g10126.t1 original gene structure, not modified by PASA NODE_419_length_24148_cov_41.735 AUGUSTUS gene 527 2609 . - . ID=g10126;Name=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS mRNA 527 2609 . - . ID=g10126.t1;Parent=g10126;Name=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 2559 2609 . - . ID=g10126.t1.exon1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 2559 2609 . - 0 ID=cds.g10126.t1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 1746 1970 . - . ID=g10126.t1.exon2;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 1746 1970 . - 0 ID=cds.g10126.t1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 1534 1645 . - . ID=g10126.t1.exon3;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 1534 1645 . - 0 ID=cds.g10126.t1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 1270 1367 . - . ID=g10126.t1.exon4;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 1270 1367 . - 2 ID=cds.g10126.t1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 828 976 . - . ID=g10126.t1.exon5;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 828 976 . - 0 ID=cds.g10126.t1;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 527 641 . - . ID=g10126.t1.exon6;Parent=g10126.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 527 641 . - 1 ID=cds.g10126.t1;Parent=g10126.t1 #PROT g10126.t1 g10126 MAGGAPRTPLERSNMNGKHAVKKDETNLPEGRTLFAANVPWEASEESIREVFASCGAVDAVYFSVVAGEHDERSLGVTDDDAYEAIRVGGTRTAHVVLDTDKAVSKALKQKWGVTILTKGISHDAIGLKKWISDAKSARKDIDALQSEVDEFMARFDAAQDQARKDRDSMAAPDDEGWVTVVRNKRKDAVEDEDEAAAKRQKKKKELINFYRFQQREARRDQLADLRKKFEEDKVKIAQMKAARKFRPY* # ORIGINAL: g10129.t1 original gene structure, not modified by PASA NODE_419_length_24148_cov_41.735 AUGUSTUS gene 7492 9718 . - . ID=g10129;Name=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS mRNA 7492 9718 . - . ID=g10129.t1;Parent=g10129;Name=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 9509 9718 . - . ID=g10129.t1.exon1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 9509 9718 . - 0 ID=cds.g10129.t1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 9251 9420 . - . ID=g10129.t1.exon2;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 9251 9420 . - 0 ID=cds.g10129.t1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 8851 9163 . - . ID=g10129.t1.exon3;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 8851 9163 . - 1 ID=cds.g10129.t1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 8543 8733 . - . ID=g10129.t1.exon4;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 8543 8733 . - 0 ID=cds.g10129.t1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 8302 8454 . - . ID=g10129.t1.exon5;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 8302 8454 . - 1 ID=cds.g10129.t1;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 7492 8200 . - . ID=g10129.t1.exon6;Parent=g10129.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 7492 8200 . - 1 ID=cds.g10129.t1;Parent=g10129.t1 #PROT g10129.t1 g10129 MFFSHLVLQKQGPLGSIWLAAHWDRKLSRVHIIQTNIQSSVNSIITPQTPMALRMSSHLLLGVVRIYSFKAKFLLADCSSAMTKINNAFRPGVIDLPADSTTAHHNAITLQDNFNEFDVDFPEIDLDRLQEENQICVTVSRREDITLRENPFQTLAIHDDRMEVDDGFGEDSGYLFGGDVSVAGMTANQSVEVERLRDNANDVSARFDPLSLQADRGPNDSINKDANTSIKLPEQYGYDALNKDTDAVPMDLGGDADFGFGGGDYDFGQAPNMDLPDAPLQESMRVEEPATPIAKVAQQRRKRKLVIDEDVELSPEELRRQCDNTLSHTREYDVFAPRTKRGMYRREFNDGGIDFLLSVPASFGMGMNMDLCRSIASSVKSVLRPPVTRAPASARERAAAASTPAAVETSALDESRNNDTFGEFAPVDDYLGGGDYDYGADPAQTGETDVPKESAQNDEVVAPLRAEADASEIADIGGRAATIDPIDVTLPEGEDGQGHGEGEKGWSRRTQRMMQMLRKEFESDPTPIRLKSLVRTKDRKTAASSFFEVLVLKTKGYIDVEQRKPYEDILVSPTERLVSRA* # PASA_UPDATE: g10130.t1, single gene model update, valid-1, status:[pasa:asmbl_7083,status:3], valid-1 NODE_419_length_24148_cov_41.735 . gene 10572 14719 . + . ID=g10130;Name=g10130.t1 NODE_419_length_24148_cov_41.735 . mRNA 10572 14719 . + . ID=g10130.t1;Parent=g10130;Name=g10130.t1 NODE_419_length_24148_cov_41.735 . five_prime_UTR 10572 10670 . + . ID=g10130.t1.utr5p1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 10572 10811 . + . ID=g10130.t1.exon1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 10671 10811 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 11060 11254 . + . ID=g10130.t1.exon2;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 11060 11254 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 11595 11665 . + . ID=g10130.t1.exon3;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 11595 11665 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 11775 11876 . + . ID=g10130.t1.exon4;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 11775 11876 . + 1 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 11980 12052 . + . ID=g10130.t1.exon5;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 11980 12052 . + 1 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 12221 12359 . + . ID=g10130.t1.exon6;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 12221 12359 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 12615 12792 . + . ID=g10130.t1.exon7;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 12615 12792 . + 2 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 13072 13267 . + . ID=g10130.t1.exon8;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 13072 13267 . + 1 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 13407 13526 . + . ID=g10130.t1.exon9;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 13407 13526 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 13696 13960 . + . ID=g10130.t1.exon10;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 13696 13960 . + 0 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . exon 14123 14719 . + . ID=g10130.t1.exon11;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . CDS 14123 14301 . + 2 ID=cds.g10130.t1;Parent=g10130.t1 NODE_419_length_24148_cov_41.735 . three_prime_UTR 14302 14719 . + . ID=g10130.t1.utr3p1;Parent=g10130.t1 #PROT g10130.t1 g10130 MAEVEAVVNGDHAVAKKKVKVVAPDEKLFKQQTEELTAKIDAIYEKLNAMSIKKEKDADGKPIPQPKSPYQEKRDELMKKLQTARAAREAVFAKKQAVDEQLKGQNDKVKKRMDEANKLRADLRYRTSEEADEAIKRLEAELKMQNFTLTEEKRIVSEISALKKSKKQLQEYDAAKNAIETERNDSNKLRETQTTLFKELNKCRDEETEVKKQLDTIKAAQEKEHGSKEERQANWANLTKELDVLKAKRNEVWTKFTKERQEYFLATKEERDRQRAKAQEERKKRQEEITKQREQRRKEQEEYEASIDPHEDDKIKCTNLAGYLEALLPHQHAAAAEAPKAQEPARLSENNPKNKMDNVVVLKRKTEEDELSEMFSAFGKGKKAKKGAAPAKETAAPVAAAPSTKALKHALSIIEDFVAVGVAAPMNAAEIPATLEALKTRKEHFEGLTRQHREKAKERVAKRKAEEEAAAAAASAEPATEAEAEAEAAVPAEEEEAISEVAAPEDAPVPEAPEDDAEEEAAAPEEAAAPEESAAPEESAAPEEAAPESNDA* # PASA_UPDATE: g10132.t1, single gene model update, valid-1, status:[pasa:asmbl_7085,status:3], valid-1 NODE_419_length_24148_cov_41.735 . gene 18101 21614 . - . ID=g10132;Name=g10132.t1 NODE_419_length_24148_cov_41.735 . mRNA 18101 21614 . - . ID=g10132.t1;Parent=g10132;Name=g10132.t1 NODE_419_length_24148_cov_41.735 . five_prime_UTR 21452 21614 . - . ID=g10132.t1.utr5p1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 20285 21614 . - . ID=g10132.t1.exon1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 20285 21451 . - 0 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 20024 20136 . - . ID=g10132.t1.exon2;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 20024 20136 . - 0 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 19596 19701 . - . ID=g10132.t1.exon3;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 19596 19701 . - 1 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 19224 19319 . - . ID=g10132.t1.exon4;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 19224 19319 . - 0 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 18822 19032 . - . ID=g10132.t1.exon5;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 18822 19032 . - 0 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 18471 18573 . - . ID=g10132.t1.exon6;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 18471 18573 . - 2 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . exon 18101 18304 . - . ID=g10132.t1.exon7;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . CDS 18175 18304 . - 1 ID=cds.g10132.t1;Parent=g10132.t1 NODE_419_length_24148_cov_41.735 . three_prime_UTR 18101 18174 . - . ID=g10132.t1.utr3p1;Parent=g10132.t1 #PROT g10132.t1 g10132 MVVPKGKTPTKGKTPTKSAAAVTPRLSSASSDKIRNSTTDYAAPDNGAANDRPLNKATPRGKALMAAISELSNPKPMDFDPEDPFDAQSFSLAKSSLGARGEDSDDGVDGDDFPPPTKSILRGQARVDEDDDDPKYRGKRLSRKEFEMDSDGDDMEGIAQMSSSDDGSVDFNDDDEDDDEEEEEPIRARGKKAVASAAKKSPAVTKKGAIASRRSGRGMSDDDSSDAASGDDIDLDGEGDSDSEDQQGSFDSGESGASDLVEGEDSDGSDDDDEGGDESGLAVAGEQALIDEYKRIALEESSKGGIRTLAAEEEDDAEKGRHSKTQIEVFDALLETRIRFQGPVTLANRLPQGSDRRAFARSDARTEALYGECTSGLRRVLSSLLQLQEGLLAQNPETASVVKSRKRPREDDDVGSIWEYMSATDKGLLPYRDQTITKWSNKTRIVDGGSALHGKKFKAINQGILEQVNQALLAKDRLIRKTQLKRTPFRVLGKPAPAAVSNAPSESDGGVRLFDEDILSGGAVARKRSATENEEYDEETFDDADFYHALLRELIERKATGMDPDDPASMGRQWLEIQRLRVKTKRKVDTKASKGRKLRYDAHPKIINFMVPVEGVVENEMARTELFASLFGRLAEAPSAR* # ORIGINAL: g10133.t1 original gene structure, not modified by PASA NODE_419_length_24148_cov_41.735 AUGUSTUS gene 22007 23385 . + . ID=g10133;Name=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS mRNA 22007 23385 . + . ID=g10133.t1;Parent=g10133;Name=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 22007 22097 . + . ID=g10133.t1.exon1;Parent=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 22007 22097 . + 0 ID=cds.g10133.t1;Parent=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 22549 22897 . + . ID=g10133.t1.exon2;Parent=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 22549 22897 . + 2 ID=cds.g10133.t1;Parent=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS exon 23349 23385 . + . ID=g10133.t1.exon3;Parent=g10133.t1 NODE_419_length_24148_cov_41.735 AUGUSTUS CDS 23349 23385 . + 1 ID=cds.g10133.t1;Parent=g10133.t1 #PROT g10133.t1 g10133 MAETSSAAGADAACLSCPSSVPAQRTEKREVGACIVNPDKKIVGIGYNGMPNGCSDDVLPWTRVADNPLDTKYMYVCHAELNAILNKNSADVRGCSLYVALFPCNECAKLIIQSGISHVHYVSDKYRDKPEMIASRRLLDLAKVVCSLKVERDAARLI* # PASA_UPDATE: g10131.t1, single gene model update, valid-1, status:[pasa:asmbl_7084,status:12],[pasa:asmbl_7089,status:12], valid-1 NODE_419_length_24148_cov_41.735 . gene 15403 17862 . + . ID=g10131;Name=g10131.t1 NODE_419_length_24148_cov_41.735 . mRNA 15403 17862 . + . ID=g10131.t1;Parent=g10131;Name=g10131.t1 NODE_419_length_24148_cov_41.735 . five_prime_UTR 15403 15450 . + . ID=g10131.t1.utr5p1;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . exon 15403 15561 . + . ID=g10131.t1.exon1;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . CDS 15451 15561 . + 0 ID=cds.g10131.t1;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . exon 15686 15839 . + . ID=g10131.t1.exon2;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . CDS 15686 15839 . + 0 ID=cds.g10131.t1;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . exon 15948 17862 . + . ID=g10131.t1.exon3;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . CDS 15948 17560 . + 2 ID=cds.g10131.t1;Parent=g10131.t1 NODE_419_length_24148_cov_41.735 . three_prime_UTR 17561 17862 . + . ID=g10131.t1.utr3p1;Parent=g10131.t1 #PROT g10131.t1 g10131 MTQTEEYSGAIGIDLGTTYSCVGVWENDRVEIIANDQGNRTTPSYVAFSDSERLIGDPAKNQAAMNPENTVFDAKRLIGRRINETSVQHDMKMWPFKVVEKDGGKPFIRVNYKGEEKDCTPEEISSMVLTKMKETAEAYLGKTVKKAVVTVPAYFNDSQRQATKDAGAIAGLEVLRIINEPTAAALAYGLDISDKKERTVLIFDLGGGTFDVSLLTIAEGMFTVKATAGDTHLGGEDFDNRLLNYLKEEFKKKNGGKDISDSARAARRLRSACERAKRTLSTMTKADVEVEALYDGIDFNAVVTRAKFEELCSDLFLNCINPVDKVLKDAKVKKTEVDDIVLVGGSTRIPKVQALLRDFFGGKELNKSINPDEAVAYGAAVQAAILTGTRSKRTENVLLLDVVPLSLGIEMQGGIMSVVVPRNTTIPCVKTSIFTTTENNQTQVEFPVYEGERPMTRDNNLLGQFELTGILAAPKGTAQLEVTFNISADGIMAVKAQDLATKRTNQITIKNDGARLSSYDIERMVEDAKKFKEDDEAVRSSIAAKEELTSYISQIQDTILSDVNITNKLKKAFDLGEIENALMEAMDWVDSNAGTAKKEDILLQKRSIEKRIAPLTKYLYQHQSR* # PASA_UPDATE: g10127.t1, single gene model update, valid-1, status:[pasa:asmbl_7082,status:3], valid-1 NODE_419_length_24148_cov_41.735 . gene 2836 5246 . + . ID=g10127;Name=g10127.t1 NODE_419_length_24148_cov_41.735 . mRNA 2836 5246 . + . ID=g10127.t1;Parent=g10127;Name=g10127.t1 NODE_419_length_24148_cov_41.735 . five_prime_UTR 2836 3171 . + . ID=g10127.t1.utr5p1;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . exon 2836 3339 . + . ID=g10127.t1.exon1;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . CDS 3172 3339 . + 0 ID=cds.g10127.t1;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . exon 3495 3950 . + . ID=g10127.t1.exon2;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . CDS 3495 3950 . + 0 ID=cds.g10127.t1;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . exon 4158 5246 . + . ID=g10127.t1.exon3;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . CDS 4158 4919 . + 0 ID=cds.g10127.t1;Parent=g10127.t1 NODE_419_length_24148_cov_41.735 . three_prime_UTR 4920 5246 . + . ID=g10127.t1.utr3p1;Parent=g10127.t1 #PROT g10127.t1 g10127 MRRQSDKLSFAQPPPSPLGAEKVPLLYDVERVSISSDDSILGRQTSRYQSLPTDVSEAGPCPPDRFNLAYLIMFIQGVGMLFPWNMFITATDYYQSRFDNSSFADNFELYFTFTFQAANIIMLLFTVRFQHLFSVSTRIFVPLFVQLAVFSLTTALVKVEDISTNTFFFITMACVVAAGAMTAFLQGGIFGLAGTLPFKYVQAVMGGQALGAIIVSVTSIITIAVGESKQTSALAFFSVSVAVIAICIISYAMMLRLPFIIYHLEMRAPESINKDVARSFAFTDTFRRIRGLAFWVGYNFFITLALFPSITASVKTSNNFNHNLFVPIYNFLGFNVGDFLGRHSAGYFQRPGPDRLWIPIALRTIFVPLFMFCNVENSRFPTAFHNDAFPVIFMIVFATTNGYLGSLAMMYGPAQVPQAEKEVAGTMMVFALTLGLGLGSVSSFGVKAILTGQNPFISSST* # PASA_UPDATE: g10128.t1, single gene model update, valid-1, status:[pasa:asmbl_7087,status:12], valid-1 NODE_419_length_24148_cov_41.735 . gene 5722 7103 . + . ID=g10128;Name=g10128.t1 NODE_419_length_24148_cov_41.735 . mRNA 5722 7103 . + . ID=g10128.t1;Parent=g10128;Name=g10128.t1 NODE_419_length_24148_cov_41.735 . exon 5722 5817 . + . ID=g10128.t1.exon1;Parent=g10128.t1 NODE_419_length_24148_cov_41.735 . CDS 5722 5817 . + 0 ID=cds.g10128.t1;Parent=g10128.t1 NODE_419_length_24148_cov_41.735 . exon 5996 7103 . + . ID=g10128.t1.exon2;Parent=g10128.t1 NODE_419_length_24148_cov_41.735 . CDS 5996 6985 . + 0 ID=cds.g10128.t1;Parent=g10128.t1 NODE_419_length_24148_cov_41.735 . three_prime_UTR 6986 7103 . + . ID=g10128.t1.utr3p1;Parent=g10128.t1 #PROT g10128.t1 g10128 MTRGGSKESYFALRKRRIKESFNSSMQNIFDKYDRQFKNSDVVDLKSMTVSEEKGFLRDADVHLFGSTFKKPRRKGRLVAQLSEVGDDFEDKGSAAYFRDDISDDDVDDYQPSDRRVSGESNRRVERTRSSPIRLASKSPWKQNAEPVGSAEKLERSSVVYSPSATRKSAAKQGSEVGYGGSSGYDADVNRLMSALSQSAGADEAALGGDAVGEDDYCGRGADAKKRSAAGGKVTAAIASSPKAAPRGPGRPRAADKRLSGDFDEAFSSAEEDAVRVASVQRVDKKRKGEVVHRSPKKRAKRELFAEESAVEKRVTTATHKRADAPRDTVDRSAPRGVVGGECAGPGACTKVFCFKCAMGV* # ORIGINAL: g12201.t1 original gene structure, not modified by PASA NODE_4259_length_1920_cov_36.0211 AUGUSTUS gene 187 1683 . - . ID=g12201;Name=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS mRNA 187 1683 . - . ID=g12201.t1;Parent=g12201;Name=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS exon 1681 1683 . - . ID=g12201.t1.exon1;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS CDS 1681 1683 . - 0 ID=cds.g12201.t1;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS exon 1423 1533 . - . ID=g12201.t1.exon2;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS CDS 1423 1533 . - 0 ID=cds.g12201.t1;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS exon 1112 1165 . - . ID=g12201.t1.exon3;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS CDS 1112 1165 . - 0 ID=cds.g12201.t1;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS exon 638 800 . - . ID=g12201.t1.exon4;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS CDS 638 800 . - 0 ID=cds.g12201.t1;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS exon 187 336 . - . ID=g12201.t1.exon5;Parent=g12201.t1 NODE_4259_length_1920_cov_36.0211 AUGUSTUS CDS 187 336 . - 2 ID=cds.g12201.t1;Parent=g12201.t1 #PROT g12201.t1 g12201 MTAAEREAALDGINIRGASVEDLCLDFTLPGYPDIELKENGREFAVTLENLEEYLGLVVESTLRGGVARQFEAFRNGFNAVFPIMSMRAFAPDEIDTLLCGTSKELWDRKTLVESCKPDHGYTLGSGAVQKLFDILSEYAPEEQRKFLQFATGSPNLPVG # PASA_UPDATE: g2744.t1, single gene model update, valid-1, status:[pasa:asmbl_7483,status:12], valid-1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . gene 292 1271 . - . ID=g2744;Name=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . mRNA 292 1271 . - . ID=g2744.t1;Parent=g2744;Name=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . five_prime_UTR 1214 1271 . - . ID=g2744.t1.utr5p1;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . exon 1180 1271 . - . ID=g2744.t1.exon1;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . CDS 1180 1213 . - 0 ID=cds.g2744.t1;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . exon 839 927 . - . ID=g2744.t1.exon2;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . CDS 839 927 . - 2 ID=cds.g2744.t1;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . exon 614 676 . - . ID=g2744.t1.exon3;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . CDS 614 676 . - 0 ID=cds.g2744.t1;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . exon 292 531 . - . ID=g2744.t1.exon4;Parent=g2744.t1 NODE_4629_length_1391_cov_45.829_potentialcontaminant . CDS 292 531 . - 0 ID=cds.g2744.t1;Parent=g2744.t1;3_prime_partial=true #PROT g2744.t1 g2744 MSLQDIIRLATGGSDPRVEGAISDYVVNTMLSNDLSTASQRAVVVTLREELVALINIGEFPEDSLRRFSPRYDPVRSLRAFLDAACTVFVTRSVEFHHNRQLPLWLVAWVKDTCGLGVHLLTWLAVNGQEDMMVLVETIVDV # PASA_UPDATE: g177.t1, single gene model update, valid-1, status:[pasa:asmbl_5620,status:12], valid-1 NODE_3144_length_4201_cov_78.9624 . gene 248 4096 . + . ID=g177;Name=g177.t1 NODE_3144_length_4201_cov_78.9624 . mRNA 248 4096 . + . ID=g177.t1;Parent=g177;Name=g177.t1 NODE_3144_length_4201_cov_78.9624 . five_prime_UTR 248 509 . + . ID=g177.t1.utr5p1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 248 558 . + . ID=g177.t1.exon1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 510 558 . + 0 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 807 913 . + . ID=g177.t1.exon2;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 807 913 . + 2 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 1055 1120 . + . ID=g177.t1.exon3;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 1055 1120 . + 0 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 1359 1502 . + . ID=g177.t1.exon4;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 1359 1502 . + 0 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 1796 1901 . + . ID=g177.t1.exon5;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 1796 1901 . + 0 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 2145 2486 . + . ID=g177.t1.exon6;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 2145 2486 . + 2 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 3063 3295 . + . ID=g177.t1.exon7;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 3063 3295 . + 2 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 3539 3688 . + . ID=g177.t1.exon8;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 3539 3688 . + 0 ID=cds.g177.t1;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . exon 3902 4096 . + . ID=g177.t1.exon9;Parent=g177.t1 NODE_3144_length_4201_cov_78.9624 . CDS 3902 4096 . + 0 ID=cds.g177.t1;Parent=g177.t1 #PROT g177.t1 g177 MSKKGESTSFFDRGIEKLTAKDGVEDMTVIEDIDEEGINTNLEVRFKRDEIYTFTGTILVAVNPFKYIPGIYEQDIVRNYTGVRMGAIAPHVFATAEATYENIRSTPGNQSVIISGESGAGKTENTKLILQYLTAVTSNPKWIEQQIMEANTILEAFGNAKTVRNNNSSRFGKFTKVCFNNEHAIKGCIIQDYLLEQSRVVSQSPDERNYHVFYQLCAGCKASPELAGKFQVKEPKYYNYLNQSGCIAIPGLDDKKEFDALRLAMTVLSIQTETQDSLFCILSTVLLLGNLEFKDVDGESIDFTPEDVGLIETMCKLLKTQPAQMKKALAFRQLTVRDNTTEIPLKIGEARENRNAMAKALYSRVFTVIIHHINNCTNPGSEPARFIGVLDIFGFENFKINSFEQLCINYTNEKLHKFFNDYCFQVEQAEVCACVRACVRSLTCSLLGKCQSCACRSVLDLDL* # PASA_UPDATE: g9880.t1, single gene model update, valid-1, status:[pasa:asmbl_5455,status:12], valid-1 NODE_3036_length_4477_cov_41.2753 . gene 55 2238 . + . ID=g9880;Name=g9880.t1 NODE_3036_length_4477_cov_41.2753 . mRNA 55 2238 . + . ID=g9880.t1;Parent=g9880;Name=g9880.t1 NODE_3036_length_4477_cov_41.2753 . exon 55 1326 . + . ID=g9880.t1.exon1;Parent=g9880.t1 NODE_3036_length_4477_cov_41.2753 . CDS 55 1326 . + 0 ID=cds.g9880.t1;Parent=g9880.t1 NODE_3036_length_4477_cov_41.2753 . exon 1493 2238 . + . ID=g9880.t1.exon2;Parent=g9880.t1 NODE_3036_length_4477_cov_41.2753 . CDS 1493 2179 . + 0 ID=cds.g9880.t1;Parent=g9880.t1 NODE_3036_length_4477_cov_41.2753 . three_prime_UTR 2180 2238 . + . ID=g9880.t1.utr3p1;Parent=g9880.t1 #PROT g9880.t1 g9880 MDGMDPKQVGTYAGAVAACFAFGQFISSYLWGMMADRYGTKLVVMVSLLGTMASTVVFGFSTSVAMAAASRISAGLLNGNIGVLKSYLGKVTDSSNQSNAFAMLSLAWGTGSIVAPAVGGLLARPAKQYPSLFSETGFFGVHAYLLPCLVAASFVLLSFFLTVFLLKEDPKGVKKGYSRVSEGRSAGSELELNARIPETREDDVGAADGQSHAESVGELHALSQSTVKLCAVDAEGNAVSGSHNEEDEEGDCESATGGAVTGRGLLSGRFPSIGNKKGRYARLGQDDDSFSVDGDDDIELGKGAAPAIDRLSSLKKGKGIDGVAVASKAVANDDVNDDNDGAVPPVKESLGKNVWLATTLYGLLAFIFIMMDETYPLFCSSRPVDGGLGFESGKIGMSLSIMGGTVLFYTLCLYPHVAARIGLMNCYRWGLYLTIVVIMVFPMLNYIVTTNQPSALLWVVLITNLTLRGAIGATSFTAIMIFVNNSVPPHLMGRANGIGQSMASFARASGPALAGLLWSQTSHRHFVFHQGVPFLVITLIILGTAALSYSLPSKIIFPFVEQQRMAFGDMRLDGDGVSGTESEGEFSDDEDVVFDANNTSAVMQSVDNLAFDVDGASRQTRTVRNKARRSGRRRLSGAESGANGVTVMAMAH* # PASA_UPDATE: g9881.t1, single gene model update, valid-1, status:[pasa:asmbl_5456,status:12],[pasa:asmbl_5457,status:12], valid-1 NODE_3036_length_4477_cov_41.2753 . gene 2313 4182 . - . ID=g9881;Name=g9881.t1 NODE_3036_length_4477_cov_41.2753 . mRNA 2313 4182 . - . ID=g9881.t1;Parent=g9881;Name=g9881.t1 NODE_3036_length_4477_cov_41.2753 . five_prime_UTR 4156 4182 . - . ID=g9881.t1.utr5p1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . exon 3821 4182 . - . ID=g9881.t1.exon1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . CDS 3821 4155 . - 0 ID=cds.g9881.t1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . exon 3382 3604 . - . ID=g9881.t1.exon2;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . CDS 3382 3604 . - 1 ID=cds.g9881.t1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . exon 2862 3134 . - . ID=g9881.t1.exon3;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . CDS 2862 3134 . - 0 ID=cds.g9881.t1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . exon 2313 2713 . - . ID=g9881.t1.exon4;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . CDS 2669 2713 . - 0 ID=cds.g9881.t1;Parent=g9881.t1 NODE_3036_length_4477_cov_41.2753 . three_prime_UTR 2313 2668 . - . ID=g9881.t1.utr3p1;Parent=g9881.t1 #PROT g9881.t1 g9881 MSKSLKNFISIADFLSSGNTTQRARHFRLYCLLSSYRTRLDIEDTSTALVHAETIEHKVVEFLTMLRPPVAVAKAESAGIGTYASASGVDGGWSLTGPSLKWGPSEVALASKLHATRTAVDVALRCDFDTPAVIRECLSLISSANAYFNAHRNAPEATHSINRPLLANVALFIRTTFQTFGVNFDEVDGLSGVSSSASPSSADDVAAVLDVLGSFRMTVRAAALKELKDAKQLAKSGVAGLAPSTENNRGAAVANSVLRACDELRDKSSEVLGVVFKDTTTGSVWFRNRRS* # PASA_UPDATE: g12167.t1, single gene model update, valid-1, status:[pasa:asmbl_5227,status:12], valid-1 NODE_2912_length_4761_cov_46.3963 . gene 1 4729 . - . ID=g12167;Name=g12167.t1 NODE_2912_length_4761_cov_46.3963 . mRNA 1 4729 . - . ID=g12167.t1;Parent=g12167;Name=g12167.t1 NODE_2912_length_4761_cov_46.3963 . exon 4319 4729 . - . ID=g12167.t1.exon1;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . CDS 4319 4729 . - 0 ID=cds.g12167.t1;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . exon 3823 4029 . - . ID=g12167.t1.exon2;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . CDS 3823 4029 . - 0 ID=cds.g12167.t1;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . exon 3212 3534 . - . ID=g12167.t1.exon3;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . CDS 3212 3534 . - 0 ID=cds.g12167.t1;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . exon 974 3035 . - . ID=g12167.t1.exon4;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . CDS 974 3035 . - 1 ID=cds.g12167.t1;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . exon 1 770 . - . ID=g12167.t1.exon5;Parent=g12167.t1 NODE_2912_length_4761_cov_46.3963 . CDS 1 770 . - 0 ID=cds.g12167.t1;Parent=g12167.t1;3_prime_partial=true #PROT g12167.t1 g12167 MRMRRQKIESTPVDIITNAIDLELRIRYHLDNKNLLFKDPLAPVDKADKVEMARQKQVLLEVNEWYRAAAKRMPRSSLLHLFWSNHHLYVAHSKQLALAELSLAEELGPKFDEAFIIYRRRKMMEDEQSGGKGDVIQFITYQKYFEEAQRNDLRCTVYQLRFWTEVIKTQPDIIRLHRVADIITESLSVAQKSYGQLVKMNPNSPQTLRMYAGFLMDVAYDARTADALLARATDLEDSGQAQTETRGDSILNADASTFAQLIADHRSASVTISGDHGMEGIVQDTNASACKLLGYRPRELNGRNISTIIPKPFSSNHDMYIRNYLETGETKFLDRIRLACAVHRTGFIVPIHLGIRQSCSPSGGMVFVGYMRPIVTTDHFLCVDLNEGTITGCTVSASTLLGIPAEAFAEQQHGAPSAETLQTLQITRYLPEFQTIVLGGEAAATAHIARVTTAGEGVRKYEVVPAFVESFDASIVLLRLTAADRDVTPAMSFKDMHTAVDTDVDAPEHTRAAALSARRQNRPTLTVDTRRGDGSGMRSPSPRSPMPMRVSTVRPGDVNFSIPNSGNNTARGGQSSSEDLSPGNSGATKKPKHAKSNLLYGVPSVTSVDRSLAAAEALGASRDSAGLTGEEVPVQLVQSRRVGRRVSVSFMGDFNPIDATAVGVELRTPTSTAPPGYMGEDVYGSMPSKSASSDGIRVEVSQVPDDNTLETFHDVHDTRDENGHGMFGGPETEYPGEVVSPHELCRVQAFDTVEAGSFLEDSDSGAIRERGVRAEDADERGSVASSANTSVTYVQRARASIMAKGGVGLGRLGLVLRATFFVLVVGLIAISVIGTIIYKTDSNNLVSEIQDVTLAAQRRVESHDIIDSVRLLDLYRRNLSNTFSESELRQRLLSAAVTMDQIHAALYNRFSKMTNGQKSLYTVPSILTTISDNRVKSTRMFNLWDLINLLNSRAKLLAIAPLSDFRAGKPEFDFILDNTLIGVRTAFEESMVFYEDEAKNTRDVLESAIRSVFVAGIVFSIVMIVLVVFPALAIAERRNTHVIELFFNIPKHLARGLQDSCIQRLQSRSDLDEGYDAFEEGAGANATKAETAKSKKEKADKAAKIARHRSGKVIVTARQRARLLFMNQRMAIVLCLAVLTAAIVYTAITYENETAFSDKHGHSAAEINWSNRRNYRTRLVLFAARELAICNTTTVCDHFRDVGESALVTAEQINLWLTYSNETIEINDMAAINPALAKLMFDDACVSPHQPADCASF # ORIGINAL: g3057.t1 original gene structure, not modified by PASA NODE_6496_length_558_cov_38.0351_potentialcontaminant AUGUSTUS gene 225 299 . + . ID=g3057;Name=g3057.t1 NODE_6496_length_558_cov_38.0351_potentialcontaminant AUGUSTUS mRNA 225 299 . + . ID=g3057.t1;Parent=g3057;Name=g3057.t1 NODE_6496_length_558_cov_38.0351_potentialcontaminant AUGUSTUS exon 225 299 . + . ID=g3057.t1.exon1;Parent=g3057.t1 NODE_6496_length_558_cov_38.0351_potentialcontaminant AUGUSTUS CDS 225 299 . + 0 ID=cds.g3057.t1;Parent=g3057.t1 #PROT g3057.t1 g3057 VGEGPKDVTGTCASLLDSHGNPAV* # ORIGINAL: g13815.t1 original gene structure, not modified by PASA NODE_3785_length_2761_cov_37.0398 AUGUSTUS gene 424 1938 . - . ID=g13815;Name=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS mRNA 424 1938 . - . ID=g13815.t1;Parent=g13815;Name=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS exon 1880 1938 . - . ID=g13815.t1.exon1;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS CDS 1880 1938 . - 0 ID=cds.g13815.t1;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS exon 1436 1547 . - . ID=g13815.t1.exon2;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS CDS 1436 1547 . - 1 ID=cds.g13815.t1;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS exon 1065 1133 . - . ID=g13815.t1.exon3;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS CDS 1065 1133 . - 0 ID=cds.g13815.t1;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS exon 424 559 . - . ID=g13815.t1.exon4;Parent=g13815.t1 NODE_3785_length_2761_cov_37.0398 AUGUSTUS CDS 424 559 . - 0 ID=cds.g13815.t1;Parent=g13815.t1 #PROT g13815.t1 g13815 MDGLPSEISSLLVEAGFMQRDGKSGKHHITNKGFQFLLQDTDTQVWNFMVEYLNRLADRRMNLVEALTFLFQLSFLTLGQSSSRRYYPSRLAINLASGASSGFDTAKDAKGFIIVETNFRLYAYT # ORIGINAL: g6308.t1 original gene structure, not modified by PASA NODE_3757_length_2812_cov_43.6419 AUGUSTUS gene 1 1964 . - . ID=g6308;Name=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS mRNA 1 1964 . - . ID=g6308.t1;Parent=g6308;Name=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS exon 1917 1964 . - . ID=g6308.t1.exon1;Parent=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS CDS 1917 1964 . - 0 ID=cds.g6308.t1;Parent=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS exon 867 1200 . - . ID=g6308.t1.exon2;Parent=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS CDS 867 1200 . - 0 ID=cds.g6308.t1;Parent=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS exon 1 658 . - . ID=g6308.t1.exon3;Parent=g6308.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS CDS 1 658 . - 2 ID=cds.g6308.t1;Parent=g6308.t1 #PROT g6308.t1 g6308 MSQTLSQTMSQSQSPSNTGDDKVNHCNDLKEPNGIQLGQHQLEPFSLSIVNYVGNCYEYRIYNTIQYKLPVANTDSDRFNDPERFGQCHRVTVRIRIRNAIYIRKPVAISQCDTFQISYPINLPHEPPPYYKWRTLQNAPTIDNRRGEDATDSTRVISPIFSNPLLGSQLYSSCYVIDDYVTLECVVGQADLSISSDIQVAVSVNITNIVAPYYWAGHSFLVSVGSFPVVNEDFVNPAFLRVVNVMSASLILFTLAIGGPWIEFQCLLLVLRSSCAPYYDQDIARFAMYFVAPFSELAGMGEWGVVGNVLIVLVVAAIQFAVQAVQFRRQTKLFERLRQYRSGMLN # ORIGINAL: g6309.t1 original gene structure, not modified by PASA NODE_3757_length_2812_cov_43.6419 AUGUSTUS gene 2483 2812 . - . ID=g6309;Name=g6309.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS mRNA 2483 2812 . - . ID=g6309.t1;Parent=g6309;Name=g6309.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS exon 2483 2812 . - . ID=g6309.t1.exon1;Parent=g6309.t1 NODE_3757_length_2812_cov_43.6419 AUGUSTUS CDS 2483 2812 . - 0 ID=cds.g6309.t1;Parent=g6309.t1 #PROT g6309.t1 g6309 SDDTSGFYQAGTYNNTGSNSGGSLFVDQMLTGKIRINCPNPPFLADDAVKFIPALSIVSNMTATFTSATNLIHLYRRGRMRILVSISAESXXXXPLPATTAGCTIILRP* # ORIGINAL: g10588.t1 original gene structure, not modified by PASA NODE_140_length_35679_cov_47.8572 AUGUSTUS gene 26256 28656 . + . ID=g10588;Name=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS mRNA 26256 28656 . + . ID=g10588.t1;Parent=g10588;Name=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 26256 26426 . + . ID=g10588.t1.exon1;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 26256 26426 . + 0 ID=cds.g10588.t1;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 26562 27371 . + . ID=g10588.t1.exon2;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 26562 27371 . + 0 ID=cds.g10588.t1;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 27817 28299 . + . ID=g10588.t1.exon3;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 27817 28299 . + 0 ID=cds.g10588.t1;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 28432 28656 . + . ID=g10588.t1.exon4;Parent=g10588.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 28432 28656 . + 0 ID=cds.g10588.t1;Parent=g10588.t1 #PROT g10588.t1 g10588 MLLKETIVKWNDACVAFDGGDFQKALSLLTEVADSAKLFFGMGVCNARLKKPTDAIKSFSDAIKRDEHLAVGYFERALVLHLSGRHEDCLADYDETLNHLRGNEMIDYRQLGLDFKLYACEVLFNRALAQLSLGMKATAIEDLQIATQLKKETRHSAIDAALVDAQRSGSAGSSKPFTVSSGFLFRPPQDKVTNSKDVEFIKGKGKVVAALDSQDKFTGFSGRKLYGGAQTQSVPMAMGTKHASQDDLSRSAPGPPGSPQIGRRRSMSTDSFDAKVQQQQEQYHREEEEKQRRSSPFLAPPRPTTMAPPSSSLPARPFAPKSALPSRPPASDTHHSHPPVQEPPASQGASPYYSTPKRTTYPQNAPPGGSASAVSGPHRPPPPRVSAPDAHSSAPPPVPAAQPLWARKPATGAATATTTATQSHTPSYSQNAAPPPSAPKVAAPTAALLSKFGGGVSQPAQDYRPASTASAVSGYSGLSGVSSAGDGMMKIKCHYKDTRVVQVPADASFDELYSAVVKKFSVSKITLKYKDEEGDLVCLADQGDYDMAREAMQNKLLLWCSD* # ORIGINAL: g10586.t1 original gene structure, not modified by PASA NODE_140_length_35679_cov_47.8572 AUGUSTUS gene 20451 23111 . - . ID=g10586;Name=g10586.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS mRNA 20451 23111 . - . ID=g10586.t1;Parent=g10586;Name=g10586.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 20451 23111 . - . ID=g10586.t1.exon1;Parent=g10586.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 20451 23111 . - 0 ID=cds.g10586.t1;Parent=g10586.t1 #PROT g10586.t1 g10586 MAYAMSSVDADARLLNAFAGNHKEVMYAIVSVSKRHGGFAPFEHVRNIRLVRDAIDNGLIGADLEELIHANKATWFQYSNGFFVHKSRAAHLSSIAADNTDSDRLPLSSSAAHTHAHAHAAAPPPAPSAGSSVAGGSDITIKRSQSGLSTFVEVFVPESRLSANGRLRMEDACRIIFDIVATAPKKRVLLANLGNTQMRFGVGSKHMALGKVLPEAAPRLSDLLTHLADKVQHDPTSRHHIILKDPSGTTAQPAQPEHAPSPAALHAMEIFNAVQASASPSAVFQSALPPPPATHVPSSLAAPSHLPPSTAKKGPPVPKVRTFPAQGAASPVLAAATLLPPSHSGASPAPLAPSLHAPAVGSATSTGASATSSGTLAASILTHALAPTHLQRPSSPAPAPVAAVAAHPTDDIFWPIATAGSHAVHDSARLLSRGDVDAQEATSYGLLGSIASTGSDSAPAATERDRAVYLNTASPYCLVAVGADARDTAGTLSVVLENHLLDCHPHIRADTQPTAVVFHYNDNPAALCAFHELGERRASAPAIVPVVDQTVVLVSPSYYINRKQHYAQRKNCTVLPLLFNWADLAPAQVKTLLRFGESSECQVYEATIVDMLRRTQKGGAAVSFEDFKRSLGQPVVNAQIVTLMQRLRLLECFLSNFAENQAIRGPDFRAILHSDTTPSVRRSIVVDLTDPMLGVQDVRAVFSVVLSMLAALPSPAGGKLAVFDGAHRYLDAAGDVLGRRIVSLVRDQRQQGVSVVMGSESAAHVPAEVLSLASVVVLHRFHARDCFVRLQGKLPLADADYDAIMSLVEGRAIVFALQWTDSLLDWRIGVVGRFMRHVALRARLTGGGSVLHDVSDNTTSPAVVATPATPAAISLASIVAGTASKA* # PASA_UPDATE: g10587.t1, single gene model update, valid-1, status:[pasa:asmbl_1505,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 23554 25612 . - . ID=g10587;Name=g10587.t1 NODE_140_length_35679_cov_47.8572 . mRNA 23554 25612 . - . ID=g10587.t1;Parent=g10587;Name=g10587.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 25559 25612 . - . ID=g10587.t1.utr5p1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 25388 25612 . - . ID=g10587.t1.exon1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 25388 25558 . - 0 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 25226 25271 . - . ID=g10587.t1.exon2;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 25226 25271 . - 0 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 25000 25136 . - . ID=g10587.t1.exon3;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 25000 25136 . - 2 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 24562 24738 . - . ID=g10587.t1.exon4;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 24562 24738 . - 0 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 24246 24435 . - . ID=g10587.t1.exon5;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 24246 24435 . - 0 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 23949 24088 . - . ID=g10587.t1.exon6;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 23949 24088 . - 2 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . exon 23554 23781 . - . ID=g10587.t1.exon7;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . CDS 23566 23781 . - 0 ID=cds.g10587.t1;Parent=g10587.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 23554 23565 . - . ID=g10587.t1.utr3p1;Parent=g10587.t1 #PROT g10587.t1 g10587 MDNELACEAQMPLRRFLFKFSRDELLDMSAELWQCRDSLDGNKGKKALIEDLLALRFRKGMTHKEIAEIEHLMLEKSDCSSRRWNALVLSRRDGVIAPCEASTLVSEFKRRLRAYYRAYTSWWRREDSVLVRVCMLEGSSRLTLPSPANVVYIIHYPRSSLLLATPIRSEHRKFFLQSLVGAFGADEIRELGLEGKDPASLANLVLHQQSQGAFAALRRGDVDAGPLDRRSRKRKSRDEDDEVASNHTTKHGRILAEDATIFRDTQKTTTNTFGDCPLPVLERIEFKVDVPFKMNEAQALSFPMRVHFVGPNVLEGIRCLPLAGLSSAKLPSHLADLPHAGRSSFVIRESAELAAPDQ* # ORIGINAL: g10590.t1 original gene structure, not modified by PASA NODE_140_length_35679_cov_47.8572 AUGUSTUS gene 30131 31985 . + . ID=g10590;Name=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS mRNA 30131 31985 . + . ID=g10590.t1;Parent=g10590;Name=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 30131 30259 . + . ID=g10590.t1.exon1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 30131 30259 . + 0 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 30357 30490 . + . ID=g10590.t1.exon2;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 30357 30490 . + 0 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 30650 30771 . + . ID=g10590.t1.exon3;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 30650 30771 . + 1 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 31066 31167 . + . ID=g10590.t1.exon4;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 31066 31167 . + 2 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 31319 31447 . + . ID=g10590.t1.exon5;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 31319 31447 . + 2 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 31540 31666 . + . ID=g10590.t1.exon6;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 31540 31666 . + 2 ID=cds.g10590.t1;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 31841 31985 . + . ID=g10590.t1.exon7;Parent=g10590.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 31841 31985 . + 1 ID=cds.g10590.t1;Parent=g10590.t1 #PROT g10590.t1 g10590 MAVLNTSLPDLTLLSRGKVRDVYEVSPDELLFVASDRLSAFDVVMTNGIPLKGRILTQISAFWFDFLADACPNHVITCNVDEMPESVRKYRSEIDGRCMLVRRLQMLPIEVIVRGYITGSGWKEYLATGAVCGIVLPKDMKECDKLPQPLFTPSTKAEVGVHDENITLAQAAELVGAERAKEVERVAIALYEKARDFAATKGIIIADTKFEFGVDAEGRLVLGDEALTPDSSRFWPASEYAPGRGQNSYDKQYVRDYLESIKFDKKTPVAMPEDVISATQKKYVEVFEILTGRAL* # PASA_UPDATE: g10584.t1, single gene model update, valid-1, status:[pasa:asmbl_1503,status:3], valid-1 # PASA_UPDATE: g10584.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1504,status:3], valid-1 NODE_140_length_35679_cov_47.8572 . gene 13183 15905 . - . ID=g10584;Name=g10584.t1 NODE_140_length_35679_cov_47.8572 . mRNA 13183 15905 . - . ID=g10584.t1;Parent=g10584;Name=g10584.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 15701 15905 . - . ID=g10584.t1.utr5p1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . exon 15590 15905 . - . ID=g10584.t1.exon1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . CDS 15590 15700 . - 0 ID=cds.g10584.t1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . exon 15195 15449 . - . ID=g10584.t1.exon2;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . CDS 15195 15449 . - 0 ID=cds.g10584.t1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . exon 13183 15012 . - . ID=g10584.t1.exon3;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . CDS 13255 15012 . - 0 ID=cds.g10584.t1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 13183 13254 . - . ID=g10584.t1.utr3p1;Parent=g10584.t1 NODE_140_length_35679_cov_47.8572 . mRNA 13183 15905 . - . ID=g10584.t1.1.5b6be70a;Parent=g10584;Name=g10584.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 15590 15905 . - . ID=g10584.t1.1.5b6be70a.utr5p1;Parent=g10584.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . five_prime_UTR 14878 15449 . - . ID=g10584.t1.1.5b6be70a.utr5p2;Parent=g10584.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 15590 15905 . - . ID=g10584.t1.1.5b6be70a.exon1;Parent=g10584.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 13183 15449 . - . ID=g10584.t1.1.5b6be70a.exon2;Parent=g10584.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . CDS 13255 14877 . - 0 ID=cds.g10584.t1.1.5b6be70a;Parent=g10584.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . three_prime_UTR 13183 13254 . - . ID=g10584.t1.1.5b6be70a.utr3p1;Parent=g10584.t1.1.5b6be70a #PROT g10584.t1 g10584 MSGTDVSSQIAADVPPTRRKYAIPDAPLVRISPAEYMSAAQRSCVLPMAALTPSLIGTYVRDGLIITCPDVRGRQIPFRVRVIGTSPIAPAQIVSDSVDVASPSSPWLRISRDTRLLYAESENEKDNSVHVDAATAAQGYSDDYALLAVLFRSVFSATARTPSVSTRMHTALLTGPSGTGKTTIVHRLASACGASVLAPTPAAIAASYPGEPERGVCEWVARARIAAPCVLLLDDADTMFPYVDGDQGGESMAERRLALALGAALEAPQPPIPLSSSCAAVLVVVVAVDSSRVDPIVSGRADVHIAVSAPSPALRMHILSECLGGSLPEWAGEVLERCQGMSGAQLAALVRDAHAYHLLSLADSGYDGVPDESIGNCIASREDFHACLDRLRRPAGLTENQTVTGWGDVAGLTDVKAALEQAVTWTHRHAAALSRMGISPPKGVLLYGPPGTGKTLLARVVACESGASFFALAIPDLLRSEVGESERILRETFAAARHSRPSVVFMDEVQALFGSRGGPGGGGVNRTLVTQLIVEMDALDVCPGVVVLGATNAPHAIDSALLSAGRFERALFVPPPDASARRHILSSLRNAALRGGATAMPVWADSVDVEELVALTDGFTGADLRSLARQAAVESFKRRIALAETRQTDVTGDLLQMALSALGSRPPGAAIDHQDFTRALGSVMPSVGEDEVRRMRSWRPYAQGGDR* #PROT g10584.t1.1.5b6be70a g10584 MHTALLTGPSGTGKTTIVHRLASACGASVLAPTPAAIAASYPGEPERGVCEWVARARIAAPCVLLLDDADTMFPYVDGDQGGESMAERRLALALGAALEAPQPPIPLSSSCAAVLVVVVAVDSSRVDPIVSGRADVHIAVSAPSPALRMHILSECLGGSLPEWAGEVLERCQGMSGAQLAALVRDAHAYHLLSLADSGYDGVPDESIGNCIASREDFHACLDRLRRPAGLTENQTVTGWGDVAGLTDVKAALEQAVTWTHRHAAALSRMGISPPKGVLLYGPPGTGKTLLARVVACESGASFFALAIPDLLRSEVGESERILRETFAAARHSRPSVVFMDEVQALFGSRGGPGGGGVNRTLVTQLIVEMDALDVCPGVVVLGATNAPHAIDSALLSAGRFERALFVPPPDASARRHILSSLRNAALRGGATAMPVWADSVDVEELVALTDGFTGADLRSLARQAAVESFKRRIALAETRQTDVTGDLLQMALSALGSRPPGAAIDHQDFTRALGSVMPSVGEDEVRRMRSWRPYAQGGDR* # PASA_UPDATE: g10589.t1, single gene model update, valid-1, status:[pasa:asmbl_1506,status:3], valid-1 NODE_140_length_35679_cov_47.8572 . gene 28734 29809 . - . ID=g10589;Name=g10589.t1 NODE_140_length_35679_cov_47.8572 . mRNA 28734 29809 . - . ID=g10589.t1;Parent=g10589;Name=g10589.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 29639 29809 . - . ID=g10589.t1.utr5p1;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . exon 29575 29809 . - . ID=g10589.t1.exon1;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . CDS 29575 29638 . - 0 ID=cds.g10589.t1;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . exon 29248 29371 . - . ID=g10589.t1.exon2;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . CDS 29248 29371 . - 2 ID=cds.g10589.t1;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . exon 28734 28979 . - . ID=g10589.t1.exon3;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . CDS 28838 28979 . - 1 ID=cds.g10589.t1;Parent=g10589.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 28734 28837 . - . ID=g10589.t1.utr3p1;Parent=g10589.t1 #PROT g10589.t1 g10589 MNHSPLTPRRKPRDERLFDHYGNFGSGTSSDEEETELPKPALDAERLRALSFTLESMKENSQRQTGPHWVQTSEGSTVKLVGLSLLAAVVCAVMIKVFMDPDFLDFDDS* # PASA_UPDATE: g10591.t1, single gene model update, valid-1, status:[pasa:asmbl_1501,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 32382 35569 . + . ID=g10591;Name=g10591.t1 NODE_140_length_35679_cov_47.8572 . mRNA 32382 35569 . + . ID=g10591.t1;Parent=g10591;Name=g10591.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 32382 32512 . + . ID=g10591.t1.utr5p1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 32382 32753 . + . ID=g10591.t1.exon1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 32513 32753 . + 0 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 32890 32985 . + . ID=g10591.t1.exon2;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 32890 32985 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 33079 33134 . + . ID=g10591.t1.exon3;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 33079 33134 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 33376 33544 . + . ID=g10591.t1.exon4;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 33376 33544 . + 0 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 33687 33761 . + . ID=g10591.t1.exon5;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 33687 33761 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 34028 34129 . + . ID=g10591.t1.exon6;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 34028 34129 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 34287 34399 . + . ID=g10591.t1.exon7;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 34287 34399 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 34627 34736 . + . ID=g10591.t1.exon8;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 34627 34736 . + 0 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 34902 34975 . + . ID=g10591.t1.exon9;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 34902 34975 . + 1 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 35156 35272 . + . ID=g10591.t1.exon10;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 35156 35272 . + 2 ID=cds.g10591.t1;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . exon 35439 35569 . + . ID=g10591.t1.exon11;Parent=g10591.t1 NODE_140_length_35679_cov_47.8572 . CDS 35439 35569 . + 2 ID=cds.g10591.t1;Parent=g10591.t1;3_prime_partial=true #PROT g10591.t1 g10591 MLANTMRPAALLMRASRTVESRSHVSHIRSASTQSGAPLDAVNGYDVVVVGGGHAGSEAAAGAARTGARTLLLTHKISTIGEMSCNPSFGGIGKGTLIREIDALDGVCGKVCDAAGVQFRVLNMSRGPAVWGPRAQIDRDLYREHMQRTLLSYPNLTVHAMGVEDLVLHDGMPLSGDARPGVSGVKLADGTTVPCKAVIITTGTFLRGQIHIGLKAIPAGRIGDEPAIGLSKTLERFGFELGRLKTGTPPRLDGRTINYSGLEVQLGDEVPTPFSYMNSRVANQDKQLACHMTHTTPEFHQIVRDNLHQNRHVTQDVRGPRYCPSIESKVLRFKRATHQVWLEPEGYNSHVVYPNGISMTMPEEAQFKAIRTMKGLENVTMLRSGYGVEYDYVDPRQLHPSLETKKIGGLFLAGQINGTTGYEEAASQ # PASA_UPDATE: g10581.t1, single gene model update, valid-1, status:[pasa:asmbl_1496,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 4027 8105 . + . ID=g10581;Name=g10581.t1 NODE_140_length_35679_cov_47.8572 . mRNA 4027 8105 . + . ID=g10581.t1;Parent=g10581;Name=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 4027 4249 . + . ID=g10581.t1.exon1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 4027 4249 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 4735 4911 . + . ID=g10581.t1.exon2;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 4735 4911 . + 2 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 5024 5208 . + . ID=g10581.t1.exon3;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 5024 5208 . + 2 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 5370 5474 . + . ID=g10581.t1.exon4;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 5370 5474 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 5771 5869 . + . ID=g10581.t1.exon5;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 5771 5869 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 5992 6093 . + . ID=g10581.t1.exon6;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 5992 6093 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 6264 6390 . + . ID=g10581.t1.exon7;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 6264 6390 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 6557 6679 . + . ID=g10581.t1.exon8;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 6557 6679 . + 2 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 6779 6915 . + . ID=g10581.t1.exon9;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 6779 6915 . + 2 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 7095 7252 . + . ID=g10581.t1.exon10;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 7095 7252 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 7463 7685 . + . ID=g10581.t1.exon11;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 7463 7685 . + 1 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . exon 7890 8105 . + . ID=g10581.t1.exon12;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . CDS 7890 8027 . + 0 ID=cds.g10581.t1;Parent=g10581.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 8028 8105 . + . ID=g10581.t1.utr3p1;Parent=g10581.t1 #PROT g10581.t1 g10581 MTALLYNRRGASPGLSATDTVMQSVEEFARRKGYISDQWPSVDPRETHIDPNVVLEGPVLGTVSVISKKLATAAPLEMEGLEELSSQISDLDAELRSYDIRLNHMVVDSDTDEDVDELEAKRNEEGDELSDFRVFMTDIDHGGLAHPGISLSDASIARDRQSVSLSQQLPGDKADGALQVATGPPRQKLGLKMVEFAVFPGFNERELTPLPGILEPPYILTRVTDAMRLSRPFLKEWRKWFMSEAAGAMLQDSFWWIFLHRFQKDIDSQDRLFTRIADSYVALFTRITPRFKEDFFKRYPDALSQAVYSTFCEAFPKSAKRFNEEFKKAVCNLVYEWITGTKAPTNVWERWQLGVLEPNTMLREARAEEEVLPVKTSKVKGIDMIEFGETAGGTRGVDGDVEGEKSALASVSLKKKKEPAAKSQDSSMASGPSAGMTRVLFDVNGNSPLVAHYMRTHKFPKDAGLSVLVNRSEPLSTDGPQGPTYKAIVSESTRTAKAMSAEYANIRKVGERERNRIWKEMLGGKRRMELEQSRLLLNPDHVKQFSDKLVGIMSAAAGDTAAIDEVQAKDTESTQVVVATAGKAADVARRKSLAGLKE* # PASA_UPDATE: g10585.t1, single gene model update, valid-1, status:[pasa:asmbl_1499,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 16247 20218 . + . ID=g10585;Name=g10585.t1 NODE_140_length_35679_cov_47.8572 . mRNA 16247 20218 . + . ID=g10585.t1;Parent=g10585;Name=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 16247 16705 . + . ID=g10585.t1.exon1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 16247 16705 . + 0 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 16837 16926 . + . ID=g10585.t1.exon2;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 16837 16926 . + 0 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 17061 17191 . + . ID=g10585.t1.exon3;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 17061 17191 . + 0 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 17348 17528 . + . ID=g10585.t1.exon4;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 17348 17528 . + 1 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 17785 17943 . + . ID=g10585.t1.exon5;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 17785 17943 . + 0 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 18229 18479 . + . ID=g10585.t1.exon6;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 18229 18479 . + 0 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 18618 18821 . + . ID=g10585.t1.exon7;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 18618 18821 . + 1 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 19036 19154 . + . ID=g10585.t1.exon8;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 19036 19154 . + 1 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . exon 19307 20218 . + . ID=g10585.t1.exon9;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . CDS 19307 19713 . + 2 ID=cds.g10585.t1;Parent=g10585.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 19714 20218 . + . ID=g10585.t1.utr3p1;Parent=g10585.t1 #PROT g10585.t1 g10585 MIHQPPINYTLRQDEVRAYSRCTLAPTPCEPNMASLGRGRRPPQPVAATQPSHAQVALAASSASASSSSRGKYPPTQRDRQSVPTRAQLQSSRDSVVVAAVPPAGQKPVVRRSSLSKLVGSADNIEEATIEDADNEIGRSNRGMGTTINPDAILNESKEGDPSKIYEVVVHGGKLERIANLEKFVRLRSLDLSCNYIERIEGLETATELKELKLYSNKLTALGGLDRCKELEVMLVHHNALESLAGLPQLKKLKTLRADCNKLATTAYLPPSVTHLDLSRNCITKLEGFNQLLNLEELRITHNSVSSLENLLACTRLLELDLSFNPLQNIAALKQLRKLTILRLESVGLQSIDALPKLDVLCELHVPGNSLRRIGAAAKLYPRLELLDASRNQLDSADDIARLSVLDTLADLSVDANPVNDDARFRGEVVSRLPHVLIINNRSVRRSPFAIDNSDGRSSRNGASSSMSENRPVTRQELDADGDDYVDGSGESRPASALSRSHSSASMRTTSSLAGGAKPPPIRPQSAMRHRASNTARVEEQIRQLEFDVASFADAVSAQFDDLRRRVLQTFDTGKDMNVVDSVDNSSSEANDASALSTASGNVGVRSTGRKSAKQAPAGASPQPLAASQDVDGGVPAGAVDGEVPVDGTGRLKKSGTSRTRGARQS* # PASA_UPDATE: g10583.t1, single gene model update, valid-1, status:[pasa:asmbl_1497,status:3], valid-1 # PASA_UPDATE: g10583.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1498,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 9850 13031 . + . ID=g10583;Name=g10583.t1 NODE_140_length_35679_cov_47.8572 . mRNA 9850 13031 . + . ID=g10583.t1;Parent=g10583;Name=g10583.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 9850 9927 . + . ID=g10583.t1.utr5p1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 9850 10029 . + . ID=g10583.t1.exon1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 9928 10029 . + 0 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 10166 10968 . + . ID=g10583.t1.exon2;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 10166 10968 . + 0 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 11199 11313 . + . ID=g10583.t1.exon3;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 11199 11313 . + 1 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 11477 11534 . + . ID=g10583.t1.exon4;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 11477 11534 . + 0 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 11684 11808 . + . ID=g10583.t1.exon5;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 11684 11808 . + 2 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 12356 12503 . + . ID=g10583.t1.exon6;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 12356 12503 . + 0 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . exon 12794 13031 . + . ID=g10583.t1.exon7;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . CDS 12794 12933 . + 2 ID=cds.g10583.t1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 12934 13031 . + . ID=g10583.t1.utr3p1;Parent=g10583.t1 NODE_140_length_35679_cov_47.8572 . mRNA 9850 11998 . + . ID=g10583.t1.1.5b6be70a;Parent=g10583;Name=g10583.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 9850 9927 . + . ID=g10583.t1.1.5b6be70a.utr5p1;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 9850 10029 . + . ID=g10583.t1.1.5b6be70a.exon1;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . CDS 9928 10029 . + 0 ID=cds.g10583.t1.1.5b6be70a;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 10166 10968 . + . ID=g10583.t1.1.5b6be70a.exon2;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . CDS 10166 10968 . + 0 ID=cds.g10583.t1.1.5b6be70a;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 11199 11313 . + . ID=g10583.t1.1.5b6be70a.exon3;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . CDS 11199 11313 . + 1 ID=cds.g10583.t1.1.5b6be70a;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . exon 11477 11998 . + . ID=g10583.t1.1.5b6be70a.exon4;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . CDS 11477 11623 . + 0 ID=cds.g10583.t1.1.5b6be70a;Parent=g10583.t1.1.5b6be70a NODE_140_length_35679_cov_47.8572 . three_prime_UTR 11624 11998 . + . ID=g10583.t1.1.5b6be70a.utr3p1;Parent=g10583.t1.1.5b6be70a #PROT g10583.t1 g10583 MADAGTRLFVREGKPLIFHMHPCSARAQIKRLVEEHGGEMHHANHHKGENFIVLVPPGSEIPAESGPVYYTTLVEESVRTNTLVAFGEHLARPANNANANGKTRAREPQNTEQSDVELPPKKRRMGEEDAGENISDTANGQASSELSSSLSGDDTDEDHAMANRGTSPRGRGAGRGRGRGRGRGRGRGAAVDSATVVSSPSGVARGRGRARGRPRGTGRGAASGRGGAVEAAAAVRGLVPAPAGAEVPPAVAEDSTDEGGPSQPAEGGASAAAAAKPKGTPRQKAAAVMFGVRAISSGQPRSNSRQPYTAAEDEAMVLYLLEHGGRIHGNTLWMEMEHRRITAHPWQSMRTRFTKTIFKNLPPDHPVRNKIQSPIARGATPRTARTNNRDLNAEFSNAAWPSLDEASAAVSQLVKDFPQFEIVDVLRTIDCFNGDLKDARAFLLTGVSVSGILPWGPDEDVLLLSADAEDVEKIVALRDERQVAERHWYISTCMSA* #PROT g10583.t1.1.5b6be70a g10583 MADAGTRLFVREGKPLIFHMHPCSARAQIKRLVEEHGGEMHHANHHKGENFIVLVPPGSEIPAESGPVYYTTLVEESVRTNTLVAFGEHLARPANNANANGKTRAREPQNTEQSDVELPPKKRRMGEEDAGENISDTANGQASSELSSSLSGDDTDEDHAMANRGTSPRGRGAGRGRGRGRGRGRGRGAAVDSATVVSSPSGVARGRGRARGRPRGTGRGAASGRGGAVEAAAAVRGLVPAPAGAEVPPAVAEDSTDEGGPSQPAEGGASAAAAAKPKGTPRQKAAAVMFGVRAISSGQPRSNSRQPYTAAEDEAMVLYLLEHGGRIHGNTLWMEMEHRRITAHPWQSMRTRFTKTIFKSTALTRSRLPPFLSLLTGVLCVSYMSVSA* # ORIGINAL: g10580.t1 original gene structure, not modified by PASA NODE_140_length_35679_cov_47.8572 AUGUSTUS gene 1495 3759 . + . ID=g10580;Name=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS mRNA 1495 3759 . + . ID=g10580.t1;Parent=g10580;Name=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 1495 1946 . + . ID=g10580.t1.exon1;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 1495 1946 . + 0 ID=cds.g10580.t1;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 2171 2220 . + . ID=g10580.t1.exon2;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 2171 2220 . + 1 ID=cds.g10580.t1;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 2561 2687 . + . ID=g10580.t1.exon3;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 2561 2687 . + 2 ID=cds.g10580.t1;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 2798 3400 . + . ID=g10580.t1.exon4;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 2798 3400 . + 1 ID=cds.g10580.t1;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS exon 3516 3759 . + . ID=g10580.t1.exon5;Parent=g10580.t1 NODE_140_length_35679_cov_47.8572 AUGUSTUS CDS 3516 3759 . + 1 ID=cds.g10580.t1;Parent=g10580.t1 #PROT g10580.t1 g10580 MSRKRSSDSAELHSAAERRSLRPRSEPSAIAASVTSAAILPNDPNCAHVVRLKPPLPVHVVPHGSSIGLGNHTDAPRTNVTKAGAHHEDSGVNDENVPPMHGAVQAGSESVVPVLEPKILLDAVPAVGTFNAPAATFGVCSWTITARAPQSTQGIDAASVSQAFSTVALADQPCYWNMLPDEVVLLILSKLRRRYLTVFARVSKNFRRLAYDESLWRTVRFSSSAPRDFDLVVHLCAQRRFSKVELRLASFVAADSFAARVMCPWRNAALSENVPLLTLDLRGSNVSDTHLHSLLPWTPRLKEINLRGCVGISDASVGLLATACTELTSLVLTGCCRVTAECVGRVVAANPRLTALGAGWINSAGLDALLDSISHTSQLTHVNLSGTMLEDLHVGALVQKCGSRLQLLDVSDCLILSEGAAGEIAHHCPALQRLGISRCNRMSAAAAMRLLQMPSLSAINVNGVLTFVANILSEEQRARLKVNDPNLAEST* # PASA_UPDATE: g10582.t1, single gene model update, valid-1, status:[pasa:asmbl_1502,status:3], valid-1 NODE_140_length_35679_cov_47.8572 . gene 8494 9432 . - . ID=g10582;Name=g10582.t1 NODE_140_length_35679_cov_47.8572 . mRNA 8494 9432 . - . ID=g10582.t1;Parent=g10582;Name=g10582.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 9365 9432 . - . ID=g10582.t1.utr5p1;Parent=g10582.t1 NODE_140_length_35679_cov_47.8572 . exon 9161 9432 . - . ID=g10582.t1.exon1;Parent=g10582.t1 NODE_140_length_35679_cov_47.8572 . CDS 9161 9364 . - 0 ID=cds.g10582.t1;Parent=g10582.t1 NODE_140_length_35679_cov_47.8572 . exon 8494 8750 . - . ID=g10582.t1.exon2;Parent=g10582.t1 NODE_140_length_35679_cov_47.8572 . CDS 8580 8750 . - 0 ID=cds.g10582.t1;Parent=g10582.t1 NODE_140_length_35679_cov_47.8572 . three_prime_UTR 8494 8579 . - . ID=g10582.t1.utr3p1;Parent=g10582.t1 #PROT g10582.t1 g10582 MSLAAMRMYGSLRSCGRGLPSLRGINAAMPAITVGGMRLYSGGALSREDVISRIVGVLSNFEKVDPKKVTAEAHFIKDLGLDSLDTVEVVMAFEEEFSIEIPDADAEKIFTAKDAADYILSNKH* # PASA_UPDATE: g10579.t1, single gene model update, valid-1, status:[pasa:asmbl_1507,status:12], valid-1 NODE_140_length_35679_cov_47.8572 . gene 1 1008 . + . ID=g10579;Name=g10579.t1 NODE_140_length_35679_cov_47.8572 . mRNA 1 1008 . + . ID=g10579.t1;Parent=g10579;Name=g10579.t1 NODE_140_length_35679_cov_47.8572 . five_prime_UTR 1 2 . + . ID=g10579.t1.utr5p1;Parent=g10579.t1 NODE_140_length_35679_cov_47.8572 . exon 1 1008 . + . ID=g10579.t1.exon1;Parent=g10579.t1 NODE_140_length_35679_cov_47.8572 . CDS 3 647 . + 0 ID=cds.g10579.t1;Parent=g10579.t1;5_prime_partial=true NODE_140_length_35679_cov_47.8572 . three_prime_UTR 648 1008 . + . ID=g10579.t1.utr3p1;Parent=g10579.t1 #PROT g10579.t1 g10579 TKGCPVAFHLFRVWNATDSCGNKGIHRQNVTVMYTEYGYDDAANQNGNNGASSGASKSSGNGAVIGGAVGGALAVVLVAAALGYLYKTGRLGGNAHESSTAKMFESVPGNEANEVRYSRAESMGSKPDANGSSNQRNPSASGRPPSQAGPRSGSVLKSSAVAEAERLARQQNEIELKRTFTNLFQKDQLDELAEFNELPGQSMAALVDVSLSEA* # PASA_UPDATE: g5108.t1, single gene model update, valid-1, status:[pasa:asmbl_5242,status:12],[pasa:asmbl_5243,status:14], valid-1 NODE_2923_length_4733_cov_99.1973 . gene 734 1469 . - . ID=g5108;Name=g5108.t1 NODE_2923_length_4733_cov_99.1973 . mRNA 734 1469 . - . ID=g5108.t1;Parent=g5108;Name=g5108.t1 NODE_2923_length_4733_cov_99.1973 . five_prime_UTR 1238 1469 . - . ID=g5108.t1.utr5p1;Parent=g5108.t1 NODE_2923_length_4733_cov_99.1973 . exon 734 1469 . - . ID=g5108.t1.exon1;Parent=g5108.t1 NODE_2923_length_4733_cov_99.1973 . CDS 734 1237 . - 0 ID=cds.g5108.t1;Parent=g5108.t1;3_prime_partial=true #PROT g5108.t1 g5108 MCVCVCVCVCVCVFVGEGRERKRIKRERWIRASNARRPAMADFLNNHSIVNKFLFPVPERSYDESSFDGGEFFWINHVSPAVEETSSLRFWSSSASASGEDAASSRNNAAVNDPASIEIASIGPHDPIPCVLVRSPGAKHLFIYSHGNGEDIGYSYELFQLLSQTLGV # ORIGINAL: g5109.t1 original gene structure, not modified by PASA NODE_2923_length_4733_cov_99.1973 AUGUSTUS gene 2028 3450 . + . ID=g5109;Name=g5109.t1 NODE_2923_length_4733_cov_99.1973 AUGUSTUS mRNA 2028 3450 . + . ID=g5109.t1;Parent=g5109;Name=g5109.t1 NODE_2923_length_4733_cov_99.1973 AUGUSTUS exon 2028 3153 . + . ID=g5109.t1.exon1;Parent=g5109.t1 NODE_2923_length_4733_cov_99.1973 AUGUSTUS CDS 2028 3153 . + 0 ID=cds.g5109.t1;Parent=g5109.t1 NODE_2923_length_4733_cov_99.1973 AUGUSTUS exon 3410 3450 . + . ID=g5109.t1.exon2;Parent=g5109.t1 NODE_2923_length_4733_cov_99.1973 AUGUSTUS CDS 3410 3450 . + 2 ID=cds.g5109.t1;Parent=g5109.t1 #PROT g5109.t1 g5109 MAGAVAEAIYRILQDVAMEDGTDADALRSILSVDVTFDGPSMLPVSSIVFDAHVECEDSSRFGQHSVSLDDKQRLKVIGDAVLHIWEDCRQHGIAAFSAVHGWSQTTLHLLNAARACSSDACGSLSREAQRKVIVDVVDKTLSAASSNSNNAFDNLRMIREIIFEFKDFGITPPRTLIVDLISALADARFSPGDSDEEERNKALRDVKATFKSYADDDARADAANCHHTGEGCTPLHYAAQMHENAGGKDLTETLLEYGADPLKRTVSACLDSAGLTLCWSQSNAFNDSAGASAYVASIGAPCKCSNKLKCRSETPMHFAALRENLNVVECLLKAAAAQKARDGSGERLTKCDLLNSSGDLPSDVAAPCTKIAIQAADSCVSLGDTFF* # ORIGINAL: g13976.t1 original gene structure, not modified by PASA NODE_1991_length_8184_cov_42.3559 AUGUSTUS gene 1154 6718 . + . ID=g13976;Name=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS mRNA 1154 6718 . + . ID=g13976.t1;Parent=g13976;Name=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 1154 1221 . + . ID=g13976.t1.exon1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 1154 1221 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 1327 1413 . + . ID=g13976.t1.exon2;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 1327 1413 . + 1 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 1743 1770 . + . ID=g13976.t1.exon3;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 1743 1770 . + 1 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 2006 2113 . + . ID=g13976.t1.exon4;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 2006 2113 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 2344 2427 . + . ID=g13976.t1.exon5;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 2344 2427 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 2785 2940 . + . ID=g13976.t1.exon6;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 2785 2940 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 3354 3461 . + . ID=g13976.t1.exon7;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 3354 3461 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 3755 3997 . + . ID=g13976.t1.exon8;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 3755 3997 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 4185 4369 . + . ID=g13976.t1.exon9;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 4185 4369 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 4626 4785 . + . ID=g13976.t1.exon10;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 4626 4785 . + 1 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 4964 5053 . + . ID=g13976.t1.exon11;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 4964 5053 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 5301 5366 . + . ID=g13976.t1.exon12;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 5301 5366 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 5669 6718 . + . ID=g13976.t1.exon13;Parent=g13976.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 5669 6718 . + 0 ID=cds.g13976.t1;Parent=g13976.t1 #PROT g13976.t1 g13976 MTVGLPEGWEESRTSEGVLYYINHNAQTTTYLHPISKQARMLKFHRETPEAENKDADKAKDAKDDKKKKVDDRRKMVSTLAATQIDSPEHTGWLTKQGGTGLGKNWRRRWFVLKDFCLYYFKSPEDTENLGQVFLPSYNVSPAMPSDNIGKKYAFKVHHAGMRTYWFAGDDKDHMVKWMTVISLAAILQTPESARLAADPSDDGNGMRMHRVLELRVSAINNAMADAAKESAAATATATVDVAAAGASGAAAEGASPSSSDPAGEASAAVAASPLSTMATIAKGAEFAEYAGMSRDQLLEIIFAEKATVTRLRRERDSLRNGNRQTKDSIADLKQEMLQTFQTLQRQLFAEQERSRALEERIRSQEKDLERRRPALSMVDGMVRMGRAVADENEGLIKTLEEASIFGTRAAEALRRASDKARNGPSIRLIEYSRRLEEETEVHDQMEEMQQFMASQAESLEERLGALEESQLQLRESSEEAERLAQRQQELEAALSKLQSSESASSAAESPADADSASSATVVDVEAQRANIAAELKDIGERLEREREAVAESQQVNKALEDEVAHLRERLREAETINQRLEESAKVAADAAVSLVDGEALAGSAAAVASASAGGAAGDGASGPGGVEVAQTDEERRQQRDKQERDLRELREKASSAYETLVEVRAAAGAVRRVLLGLADPEDGDAGYRDAGVEFLVRGKGDVGKEGTRRTRVELELELHSLRRTVDAIEKEMGRVGDARRMLDEERGRMEATTTGGKAYHAPQWVPSIDLGNERSAGGGALNLSSSGRLVIANPETLSFRDKIALFLRG* # ORIGINAL: g13977.t1 original gene structure, not modified by PASA NODE_1991_length_8184_cov_42.3559 AUGUSTUS gene 7056 7511 . - . ID=g13977;Name=g13977.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS mRNA 7056 7511 . - . ID=g13977.t1;Parent=g13977;Name=g13977.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS exon 7056 7511 . - . ID=g13977.t1.exon1;Parent=g13977.t1 NODE_1991_length_8184_cov_42.3559 AUGUSTUS CDS 7056 7511 . - 0 ID=cds.g13977.t1;Parent=g13977.t1 #PROT g13977.t1 g13977 MGQYISSQLSNAAKAVPEKMVERQRETQLQLREVQMAVAQAQARDTVLWLSAFTATVGILGTAAFIKTRRPTGFIPLLPLSFVTAYNYDFAYGNKIDRIREEAGRILLLERDPSTVRFLPPLHNLLIGEDDYRRIFSTNTPSSTGDSFSPR* # ORIGINAL: g4963.t1 original gene structure, not modified by PASA NODE_2904_length_4787_cov_35.7997 AUGUSTUS gene 1178 4034 . - . ID=g4963;Name=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS mRNA 1178 4034 . - . ID=g4963.t1;Parent=g4963;Name=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS exon 3957 4034 . - . ID=g4963.t1.exon1;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS CDS 3957 4034 . - 0 ID=cds.g4963.t1;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS exon 3476 3721 . - . ID=g4963.t1.exon2;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS CDS 3476 3721 . - 0 ID=cds.g4963.t1;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS exon 1472 3113 . - . ID=g4963.t1.exon3;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS CDS 1472 3113 . - 0 ID=cds.g4963.t1;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS exon 1178 1233 . - . ID=g4963.t1.exon4;Parent=g4963.t1 NODE_2904_length_4787_cov_35.7997 AUGUSTUS CDS 1178 1233 . - 2 ID=cds.g4963.t1;Parent=g4963.t1 #PROT g4963.t1 g4963 MMPNDSRSLFWLFAVALSISMCARHAAAQRGTLMITLINATISADDCNDSDFTGYSACDPYFGITIRIDGVDTICDVTASVNKYIKSPVNPFDPSFSCGPVSMPSNWNKILTLTVVAMDHDTSSSDDYIATGKQTYDMTGKTGGRLALGLSSWVDFDAFPTCFAPYYGGASLCSTFCDSAITCNNHGICSASGQCLCLNNSSGPNCLGCRIGFYGPTCAQCPTTCNTDVYPPCLDGSSGNGSCVACPIPGNQYGPTCSSTCKCATVSGCNRGVNGDGTCTACPSGSYGPKCDFQCNCNGGTCADGPKGNGTCVACPLGIFGTNCQKACNCSGGTCSDGPKGSGMCLTCTAGRYGPNCASVCACNGGTCLEGPSSTGTCLTCTTGRYGATCQNVCNCNGGTCFAGVAGNGTCGSCPTGKLGANCQNSCACNGGTCVDGPTGNGNCLTCPAGRYGYTCAGVCNCNGGKCLDGLTGNGQCTSCPSGQWGLTCQNSCSCNGGTCSDGISGNGTCLTCPAGRYGTDCSLTCFCNGGTCSEGPKGTGLCLACPSNAYGNSCHKNCTCNGGKCNDGPFGNGACLTCLTGWYGSSCKNNCTCNGGTCSDGPSGTGACLTCSPGRWGSSCQNVCTCGGDCSDGVDGTGLCIACDARKYGPQCSQSCSIACSTCFGGRPSANG* # ORIGINAL: g4763.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 9847 12191 . + . ID=g4763;Name=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 9847 12191 . + . ID=g4763.t1;Parent=g4763;Name=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 9847 9902 . + . ID=g4763.t1.exon1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 9847 9902 . + 0 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 10224 10654 . + . ID=g4763.t1.exon2;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 10224 10654 . + 1 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 10857 11002 . + . ID=g4763.t1.exon3;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 10857 11002 . + 2 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 11190 11344 . + . ID=g4763.t1.exon4;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 11190 11344 . + 0 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 11631 11768 . + . ID=g4763.t1.exon5;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 11631 11768 . + 1 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 11889 11993 . + . ID=g4763.t1.exon6;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 11889 11993 . + 1 ID=cds.g4763.t1;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 12098 12191 . + . ID=g4763.t1.exon7;Parent=g4763.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 12098 12191 . + 1 ID=cds.g4763.t1;Parent=g4763.t1 #PROT g4763.t1 g4763 MQLAVSIRCVEELQAHAFGSKTQDAECISGGSGPASTGPYMATPITKDLPTAVASGNIRARMEDMILRTQADVCRALSELDASVGGVANKDGLSTIRVDRWERAEGGGGVSCVLQDGHVFEKAGVNVSVVHGELPAEAVRQMRARGKVLGDGPRRFFAAGISSVIHPRNPHCPTAHFNYRYFEVENPGGEPIWWFGGGADLTPTYLDEADAVHFHKTLRDACAKTDASLYNKFKAWCDDYFLIVHRGERRGVGGIFYDDFDDRPMDEIFKFATDCAKAFAPSYVPIVARHARDSFTEAEKEWQQLRRGRYVEFNLVYDRGTKFGLATPAARIESILVSLPLTARWEYMHEPKAGSREAKIVEVLKNPRDWLAGN* # PASA_UPDATE: g4765.t1, single gene model update, valid-1, status:[pasa:asmbl_1461,status:3], valid-1 NODE_139_length_35681_cov_41.8034 . gene 15893 19506 . - . ID=g4765;Name=g4765.t1 NODE_139_length_35681_cov_41.8034 . mRNA 15893 19506 . - . ID=g4765.t1;Parent=g4765;Name=g4765.t1 NODE_139_length_35681_cov_41.8034 . five_prime_UTR 19370 19506 . - . ID=g4765.t1.utr5p1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 18935 19506 . - . ID=g4765.t1.exon1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 18935 19369 . - 0 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 18232 18445 . - . ID=g4765.t1.exon2;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 18232 18445 . - 0 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 17594 17775 . - . ID=g4765.t1.exon3;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 17594 17775 . - 2 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 16673 17198 . - . ID=g4765.t1.exon4;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 16673 17198 . - 0 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 16236 16439 . - . ID=g4765.t1.exon5;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 16236 16439 . - 2 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . exon 15893 15996 . - . ID=g4765.t1.exon6;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . CDS 15974 15996 . - 2 ID=cds.g4765.t1;Parent=g4765.t1 NODE_139_length_35681_cov_41.8034 . three_prime_UTR 15893 15973 . - . ID=g4765.t1.utr3p1;Parent=g4765.t1 #PROT g4765.t1 g4765 MNGMDDHDQRAFSALERRLTAHFEERMREQAAEFTRQLEEARRGAVVAGGGGGAQNGKTGGPHHYNGEEVEELAPVVAFPTNWRAIIMSFMETTSMHGINRAFQRGHMFTRKVFWTVVFLGALAATIYLIMNLILDYLDYASTTQFTVSYVRDMVFPTVTFCNLNIASMTAMQKAGYGNFTSDVSTIRPAIKKIDMATYYHQNRTDFIHDCTYSLSDCTSSLTNKTDNDYGMCYQFNGDGTGTTEVSSRPGAQYGLRLKLNIQQDDYLPSTSEAGVLMQVHDSTKPFNIDEQGFGLEPGRHYRVSVRRISISNLKSPYGTCKDTVLEDGETYSLSTCYSKCRDQEVISQCGCRPSGSPIKSSSVSVDECSVIHNSSDDICRLSVEKQYASNKFDCNCPEPCSETTFQYSISAITSPSNAASATQLGKLGVTANAFASNFILVDVFYEELNFWSIEQQAADTPQALFGNIGGNLGLFIGASWLTILEFMELGWWWMKAAYLRRKSRKGAVRPAGDAELQEIGTTKVVG* # ORIGINAL: g4771.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 35108 35401 . + . ID=g4771;Name=g4771.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 35108 35401 . + . ID=g4771.t1;Parent=g4771;Name=g4771.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 35108 35401 . + . ID=g4771.t1.exon1;Parent=g4771.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 35108 35401 . + 0 ID=cds.g4771.t1;Parent=g4771.t1 #PROT g4771.t1 g4771 MRDYAEAIAVDPGYSLTQYNAGNMYIRTRQRDQDDAWTRQWSWPPATRARLSTGAIARYASGDIDGTVADLDTAEKLTGCRSDILQPRGCPHGRAAV* # PASA_UPDATE: g4762.t1, single gene model update, valid-1, status:[pasa:asmbl_1460,status:12],[pasa:asmbl_1465,status:12], valid-1 NODE_139_length_35681_cov_41.8034 . gene 3107 9198 . - . ID=g4762;Name=g4762.t1 NODE_139_length_35681_cov_41.8034 . mRNA 3107 9198 . - . ID=g4762.t1;Parent=g4762;Name=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 8516 9198 . - . ID=g4762.t1.exon1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 8516 9198 . - 0 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 8272 8392 . - . ID=g4762.t1.exon2;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 8272 8392 . - 1 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 7680 7946 . - . ID=g4762.t1.exon3;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 7680 7946 . - 0 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 7045 7383 . - . ID=g4762.t1.exon4;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 7045 7383 . - 0 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 6228 6851 . - . ID=g4762.t1.exon5;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 6228 6851 . - 0 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 4485 6085 . - . ID=g4762.t1.exon6;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 4485 6085 . - 0 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . exon 3107 4306 . - . ID=g4762.t1.exon7;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . CDS 3214 4306 . - 1 ID=cds.g4762.t1;Parent=g4762.t1 NODE_139_length_35681_cov_41.8034 . three_prime_UTR 3107 3213 . - . ID=g4762.t1.utr3p1;Parent=g4762.t1 #PROT g4762.t1 g4762 MRVTSRRVGGAVAVLLAGYMVAMAVLSQSPMTDEGRFDPAGHSNNKHYSVHNNMHGRDDGEDDGGEGGKGGGVEPAFVELPAPVEIAAIGGEHRNDLFGIERLKKEVVDDAFFPPPGDDPEVLRKSMFSIPRYLTHVSTDKPTYRPGDTLYVRAFVLGAFDRVPFSNTDSRVGYVHVGSTVEVLGPAGEVLNSERVLPSNGTVLYTWSLPKDTAGGEYTVRITHARDGFPPGVRKFNIQRVSRPRMRLLLEFRERGYGPSETVTATLKVSRAEGGIPVGAEVTFSARVEGRSVSMATAAVVILDESGVATASFVLPEKIEIDDGSVTAVVTDGGVVESATKTIPLIVTAIVINSYPEGGDLVVGLLNGIYFEARDARGEPVSFEGIVVAHPTGSRAPTGEDARKQAVVPVEAVHEGRAYARFVPEDGVWYSLVVTRPAGVVNPFPLPDVKDSGIAMIATETTYASGEGVALRVSGTHVGEYKIAAYRREKEIGFVDLSLREVNKPVDVVLSLPIGAAFEGVLRVTVVAKPNKPIAERLVYRVPHSRVHVTVETDSPEYVPGGGVDLKVVTTDAATGKPIAARVGITVTDDSVLSRIEPRRRPPRLPAMALFEDEVSALDDPAAYMCEDRLTGTEEGCALNIDLLLGTQGWRRWVYVDPDRIEGQRGAADQRMLAVFKGERLIRPKMFRAMPMAMAMVNEEGNVARGDMVQLAALGAEMAPEAGGPPPAAPEPVMFANAVDGDMAAGDMAAGDMAADVGMGNHMDDRMDDRMNVRVDDGVGVGAEGVAGDAPEAEIVDWNAPMGKVAADEVQPMGLIAGHRRVYRPQYDMIPGAVFVREYAHALRPGWRPDERSDFTETVYWVDTLTTSATTGEAVARFSLSDLVTEYRVVVDAVAFDGGVGASDSVLLPARKVFAVESRIPSELTLGDELQMPIAVLNRAEKAVEVIVRARLDGSGADLGAPQTAFVGPRGNAVVLQALSIPIPGFGVTTPAIFGERQLVFQGETLPKTSQELRLKDSQTLTTNVVPVGFPTSSFTSTLTKTGLNYSVTVPKDALPGATWLRVQLFPSPVGNIMSALESLIQEPYGCFEQTSATTYPMVMAMRFLAMNTAAPGAAAAMERARELLTKGYQRLVGFETTEGGFEWFGRAPGHEALSAYGLMQFLEMQAVMHVDPALTRRTHEWLQSRRNAKGGFNLSGAKLDSFGGATTQLTTLYILWALSEAGIPLRSEDVALAKDAGTGGNDGYLMALAASILYLNKQTDLADMVAERLAALQQRDGSIVAAQSSITGSGGQALVVETTSLAAIAWSRNIQRFGDSAFRAIAFIGKNCQDGRFGSTQATVLALKAIITFKEEALVKKGLADAGGNVSVFVDRQLLGTQAYAAGATEPVVFDTRTLENLEIARQLSAPGSHEVHVKVDQTTKGPSVIVAAMSQFTSPRPATSASARITLNTTLSAESLQQGDSVDVVATVVNTEATRAPMTIAIVGLPSGLEPRHDSLRELVDSRVVSYFEVTGRAVVLYWRTLDPNAVVRVKFDATAVHPGSFTGAASRAYLYYTDEAKHWCDPLKVTISPRSL* # PASA_UPDATE: g4768.t1, single gene model update, valid-1, status:[pasa:asmbl_1463,status:12], valid-1 NODE_139_length_35681_cov_41.8034 . gene 23560 25658 . - . ID=g4768;Name=g4768.t1 NODE_139_length_35681_cov_41.8034 . mRNA 23560 25658 . - . ID=g4768.t1;Parent=g4768;Name=g4768.t1 NODE_139_length_35681_cov_41.8034 . five_prime_UTR 25500 25658 . - . ID=g4768.t1.utr5p1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 25461 25658 . - . ID=g4768.t1.exon1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 25461 25499 . - 0 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 25273 25333 . - . ID=g4768.t1.exon2;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 25273 25333 . - 0 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 24953 25132 . - . ID=g4768.t1.exon3;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 24953 25132 . - 2 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 24511 24632 . - . ID=g4768.t1.exon4;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 24511 24632 . - 2 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 24096 24207 . - . ID=g4768.t1.exon5;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 24096 24207 . - 0 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 23783 23826 . - . ID=g4768.t1.exon6;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 23783 23826 . - 2 ID=cds.g4768.t1;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . exon 23560 23646 . - . ID=g4768.t1.exon7;Parent=g4768.t1 NODE_139_length_35681_cov_41.8034 . CDS 23560 23646 . - 0 ID=cds.g4768.t1;Parent=g4768.t1 #PROT g4768.t1 g4768 MGLFGKSKTPQELVRDWRLRMKHEERTLERQIRAIQTEENKVKISLKAAAKKGDADVCKILAKEIIQSRKAVNKMYASKAQINSVVMSMQQQLAMAKLANALGKSTEVMKAMSALVKIPEVQATMMELSKEMMKAGLIEEMMEDAMTAGESDDLDAEADAHVDALLWEITNGALGSAGHVSDSLGEGKGKEAEAADEEDGEDVMQARLEALRTA* # PASA_UPDATE: g4766.t1, single gene model update, valid-1, status:[pasa:asmbl_1462,status:12], valid-1 NODE_139_length_35681_cov_41.8034 . gene 19756 22407 . - . ID=g4766;Name=g4766.t1 NODE_139_length_35681_cov_41.8034 . mRNA 19756 22407 . - . ID=g4766.t1;Parent=g4766;Name=g4766.t1 NODE_139_length_35681_cov_41.8034 . five_prime_UTR 22380 22407 . - . ID=g4766.t1.utr5p1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 22311 22407 . - . ID=g4766.t1.exon1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 22311 22379 . - 0 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 22119 22213 . - . ID=g4766.t1.exon2;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 22119 22213 . - 0 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 21931 22017 . - . ID=g4766.t1.exon3;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 21931 22017 . - 1 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 21661 21816 . - . ID=g4766.t1.exon4;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 21661 21816 . - 1 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 21400 21542 . - . ID=g4766.t1.exon5;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 21400 21542 . - 1 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 20952 21140 . - . ID=g4766.t1.exon6;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 20952 21140 . - 2 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 20498 20751 . - . ID=g4766.t1.exon7;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 20498 20751 . - 2 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 20180 20353 . - . ID=g4766.t1.exon8;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 20180 20353 . - 0 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . exon 19756 20047 . - . ID=g4766.t1.exon9;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . CDS 19883 20047 . - 0 ID=cds.g4766.t1;Parent=g4766.t1 NODE_139_length_35681_cov_41.8034 . three_prime_UTR 19756 19882 . - . ID=g4766.t1.utr3p1;Parent=g4766.t1 #PROT g4766.t1 g4766 MLMGQRFIHIGLGGYSRLIFALVVLFVEFVSRCVFAFVPQPITSLLDWLRSKAVRQGVRFFRGYRDDAEHPACDLSTLELINYFGYTGEEHVVRTEDGYLLTLHRIPRGKHDTAHHDGDRPSVLLQHGLLMNSEGWVATREMIAFKLADAGFDVWIGNNRGNRYSCRHTRLKNTDAAFWDFSLDEMAQFDVPANVHYILGHTKHAQIGYVGFSQGTAQAFAAFSINATLASKISLFVALAPAGKAKGLKDGPLKNFVEMAPDSIFLIFGHQAILSSVIFWRNLLSRNSFVAIIDASCKYLFGWHMKNYGPIERKKLLYSHLYSYGSVKNVVHWMQIVATDSFQMYDDRHDVRRSSHYRAINPHSYPVGQIKCPMALFYGGSDGITDVDWLLARLPKNIYKYKEEKYEHIDLMWAQDAPQKIFPRVISLLKESTAPKAQAPTSA* # ORIGINAL: g4764.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 12412 14901 . - . ID=g4764;Name=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 12412 14901 . - . ID=g4764.t1;Parent=g4764;Name=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 14400 14901 . - . ID=g4764.t1.exon1;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 14400 14901 . - 0 ID=cds.g4764.t1;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 13738 14184 . - . ID=g4764.t1.exon2;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 13738 14184 . - 2 ID=cds.g4764.t1;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 12703 13563 . - . ID=g4764.t1.exon3;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 12703 13563 . - 2 ID=cds.g4764.t1;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 12412 12569 . - . ID=g4764.t1.exon4;Parent=g4764.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 12412 12569 . - 2 ID=cds.g4764.t1;Parent=g4764.t1 #PROT g4764.t1 g4764 MMHCYYLTVVIAAALAGVALSESATVVGTTPGTLTPTRPPDARMHSTARLLAPPGVTSGVHLIILKRNACQRAVDELRKTVAGTFGHVATIKDATARAAPSVASSEPDPDPRPAVRPAVADGRAAVGQVGQEAIELTYVARGWIAVLDNITLHAVLASDAVAYVEEATTSLTITVSQQDVILKQASRSPAKWFVQPKPHWALDRIDQRGRCLDGMFRCLHADTLGATSSGGAHLYLLDSSLRASHTEFGDRVARGFDVLANAPLVSSTVTRDETGMCSGHATHTAALAIGATVGVARSATLHPLRVVGCSGKSSVAAVVMGIEWMIANHKAPAVALVAISGGPSMVLDEAVRAATKRGIHVVVAAGNEASTACQFSPARIPEAIAVGSSDEEDSIAGFSNRGVCVGLYAPGVAVLSAYSRGDEEYARMSGTSASAALVAGLALTLAAHRPYLTPRDMAHVITCASTNGALSLCAPDCFNRMLYMGFFEPTAAMMRGSAGVRMEESCVDHSCESHRGQLLPGKQKDAFFPRAEGFASWAVDGGHGHRAWLTLSHVRKDTVFEARAVLYRWMGEGDGWEIAAESGIISSTGFVWHRGPPGYYVWGVHLVYGSGEFTLTFKRPDRRAIAAQDMGSCHFSVDAVFSAVSPGRAQAVTDE* # ORIGINAL: g4769.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 25951 31941 . + . ID=g4769;Name=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 25951 31941 . + . ID=g4769.t1;Parent=g4769;Name=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 25951 26115 . + . ID=g4769.t1.exon1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 25951 26115 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 26276 26391 . + . ID=g4769.t1.exon2;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 26276 26391 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 26587 26668 . + . ID=g4769.t1.exon3;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 26587 26668 . + 1 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 26862 26939 . + . ID=g4769.t1.exon4;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 26862 26939 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 27119 27191 . + . ID=g4769.t1.exon5;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 27119 27191 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 27550 27764 . + . ID=g4769.t1.exon6;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 27550 27764 . + 2 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 27888 27998 . + . ID=g4769.t1.exon7;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 27888 27998 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 28165 30096 . + . ID=g4769.t1.exon8;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 28165 30096 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 30348 30646 . + . ID=g4769.t1.exon9;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 30348 30646 . + 0 ID=cds.g4769.t1;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 30804 31941 . + . ID=g4769.t1.exon10;Parent=g4769.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 30804 31941 . + 1 ID=cds.g4769.t1;Parent=g4769.t1 #PROT g4769.t1 g4769 MAAAIVVPVAQWGSQPPAHPPTCVLAMRDRETIISGASNGHIVIWRAASVEGVWEVSPRLLCVGHHSAVRALAEGVCDKGEGDVAVIISGSEDGTLCCWDARDGLCLQSTRALPGAPSSLATLSDGKHFVCAGQFSQVFLMDVDTLEVVRVIHSGARPNWVRAIALCALDDGSADALFSIAPDGTLKIWAVPRPRHAVISQGREDAPLAPLRMVCLEGAQPVALTCDPCGRSLLLVAFKSEWRLYSCQDFRVLYSARCPAKVGWSGASFLGPSHVIAWGNDGCAYLFECPSLADVPPMEELFGSVGAKRHKPPAADSSSPAFLPSPPAGDTSSGAQGLQSAAAGMGSPTLLHVFRGGLPSAPCTAPYTAPNTAASVSGTDLHADDAGSTWCPSCPEELLRGTFPVMACVAASRGVDGETPVPIITSADSAGNLFIWAVSSSCMALIHHREVTPGPEPSRPSGAVAKHVCTSPLRVRSSFPQCVCSLQSVWPTVYTGAHGISACAILRDDSVACGLQNGDISVSSLHTFCGRLAHARTEFDAVLHGHRARVTCLMEAAPPIAGSRDGSFGASLSLSTLSSAVRRDRLLVSGSADFTVRVWSLANGGKELYVFGGHSAPIVTLLEPCPDSDANRHMWICSVGGDHSVALYSLSEGRCMYRLTGHPFPISTVRWRAGDDAVVVGCADGTAYVWQLATGHLDRIASGQYAADILESCDAMPVKKDRRVAELTCVYDGFLGDGALSAVVLTINVKRLINELRAALALDGAGGLEHGSAGTLAMFALSFINAGLYGHPALASCSKALDLQEPTGSDTSFGVMGVGNCMALVLPRPADRDTCGGGRDTLVSGNTSGAAACGMPLMRWRTSANVSAVNALATTALANAFMTVGKESLRDAWSKVVTFYCALLPDAVMQMRVPSVLFMARFWQDTQTEIQEAARALLLATLARMRPHERGAYAGSWFVRMIKAQTGEDALPVGLTGDTCVLILGILGSEYPESLAGDAPSTVARMLAMLVMDDSGDVGYKRTRYRMAAAELLGKGFQLWQPHIDVQQLLRRLMFLTGPTVKDSSARMSVAGDTQGFSSSANADVSQHKPFRASIGGTSTTSLVQTATSLAPAKAYESRPRTPAVAAPSSVGRSPISSRVATGGGRQIPSSPLAGGVPSSGGISVASVSISAPAPQPALMARVARHTLMLIASTDPNMFVTIIDREMAAATSNDDRASVLRVILGLVKKKPGAFATQGSRLVDVVMRCLDPNVPHLRDRCIADSSAILHEMVKNYPNVNFHNPSQRFAVGTPDGSVVVYDLKTGTRLHVFTAHSRAVTAVAFRHDGGLIASHSAEERLLRVWRISVGFFGMLGGAPKCVREEVTPTVLLADHVRVDWSDESSCVYLVSGSHGARLAAYMVDR* # ORIGINAL: g4770.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 32710 35060 . + . ID=g4770;Name=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 32710 35060 . + . ID=g4770.t1;Parent=g4770;Name=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 32710 33798 . + . ID=g4770.t1.exon1;Parent=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 32710 33798 . + 0 ID=cds.g4770.t1;Parent=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 33911 34234 . + . ID=g4770.t1.exon2;Parent=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 33911 34234 . + 0 ID=cds.g4770.t1;Parent=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 34449 35060 . + . ID=g4770.t1.exon3;Parent=g4770.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 34449 35060 . + 0 ID=cds.g4770.t1;Parent=g4770.t1 #PROT g4770.t1 g4770 MGIADEIASHLQRGISLRLGDPSAPLIVGGGTDALLNVVCEADGADPQQRAVVACIQPPGFGKTHASLALSLSDNVYVSALRCLGETSPLISCLQSVVMPQMSSRQPSMSNAVTWRDEQRRHFRLSAAIHVQRRRRHPPRAESVQCRAVRGNHQQLWPHAEERPEGVEGAGIPPACRWRTRAGLSWRRGRPDPRHPPRAHDGPVAYCFRGCVLRKRDPKKAIRDFSSSLLVDNGPDNKIAYCHRGILYASIRRFDESLADFQSVIKLDKGNVGAHINKGILLLTQYDEPRLTALSFTAALKTDPTSIRALLCRADAYVRLNDTQMAIRDYTRLIFANPTHHLYRLHRGRYLLEQKQLELSLDDELVIADPSPQLYVLLARTRMKNGQHAEAIGDLRSATGMDPQMFDAYFSLETIGEFEDAIVEYQQALALRPGSAEALHRRGMCRLHMNNGRGVADLNKQSNATRQTLMLGCVRAGCGHYSEALRDYSTVLLTDESNTNVLRFRSILYCVIGDHANAAADLLNVMSRHPFDATLHAVIGPCHHRLGKHRCAILDYNEVVRINPFLLEAFIGRGNVRMDLGTVEELVRCRRDYIRAIHLDPLRLPAYINLGYVLQAQGKHKLAWLQFSSAVSVNPHCKDALEGCAVVNTIMGNKFGALLDMNRAVDVGTRRLSC* # PASA_UPDATE: g4767.t1, single gene model update, valid-1, status:[pasa:asmbl_1464,status:12], valid-1 NODE_139_length_35681_cov_41.8034 . gene 22697 23718 . + . ID=g4767;Name=g4767.t1 NODE_139_length_35681_cov_41.8034 . mRNA 22697 23718 . + . ID=g4767.t1;Parent=g4767;Name=g4767.t1 NODE_139_length_35681_cov_41.8034 . five_prime_UTR 22697 22800 . + . ID=g4767.t1.utr5p1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . exon 22697 22803 . + . ID=g4767.t1.exon1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . CDS 22801 22803 . + 0 ID=cds.g4767.t1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . exon 22931 23004 . + . ID=g4767.t1.exon2;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . CDS 22931 23004 . + 0 ID=cds.g4767.t1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . exon 23174 23258 . + . ID=g4767.t1.exon3;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . CDS 23174 23258 . + 1 ID=cds.g4767.t1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . exon 23390 23718 . + . ID=g4767.t1.exon4;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . CDS 23390 23524 . + 0 ID=cds.g4767.t1;Parent=g4767.t1 NODE_139_length_35681_cov_41.8034 . three_prime_UTR 23525 23718 . + . ID=g4767.t1.utr3p1;Parent=g4767.t1 #PROT g4767.t1 g4767 MLFYSFFKTLVGKEVVVELKNDVGIRGTLHSVDQFLNIKLNDVSVTEPEKYPHMLSVKNCFIRGSVVRYVQLPAEEVDTELLQDAARREASQPVAATA* # ORIGINAL: g4761.t1 original gene structure, not modified by PASA NODE_139_length_35681_cov_41.8034 AUGUSTUS gene 20 2235 . + . ID=g4761;Name=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS mRNA 20 2235 . + . ID=g4761.t1;Parent=g4761;Name=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 20 187 . + . ID=g4761.t1.exon1;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 20 187 . + 0 ID=cds.g4761.t1;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 405 1175 . + . ID=g4761.t1.exon2;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 405 1175 . + 0 ID=cds.g4761.t1;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 1299 1700 . + . ID=g4761.t1.exon3;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 1299 1700 . + 0 ID=cds.g4761.t1;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS exon 1975 2235 . + . ID=g4761.t1.exon4;Parent=g4761.t1 NODE_139_length_35681_cov_41.8034 AUGUSTUS CDS 1975 2235 . + 0 ID=cds.g4761.t1;Parent=g4761.t1 #PROT g4761.t1 g4761 MQCAFTVLCESGHLLSFSSFDEFVSDRACEAMHLEGGPLWLDVLRPSMADFEQLGEVFDLHPLTIEDCLSEDGRERMGSYEAYTFVKLHGLPQDLSAAAEAAAFTYQRDSREDTSNELDDELSPFNNDDIVRVSTSTERLLGSESSRPRERRSSRQTEDERVRSATISTPWNEDPFTDPERKAFDEYRWGVYGGDTLEGSEGETCHMQTVCAIVFPGMVLTTHMHPWWAFPRVLTETARRWKSATAAGAHVRAGSRLTPSLFPRFVVYAVLWDMVAACEKVIRCAEMSCAVLADTTGLHDFLASAGMSGDERHTLLMRLSACSRRSMLVYREIARKRDIAAALKSHWGEGTDMSRLGAAAGASVGTERFQRQPDHLFAFETPIPAAAGTSLPPDEPVSAGARTPSDETLWSPFLYFRGLHGQLVGMSKRLEVVLDQVREAQGTYLALVDISISKRMVEGTVQMKRLTQVASITAPMSLVVGVFGMNVVIPGHYSLEERTYTPFIIICAILVSLVLLQLLFLRRMRRQPPPRLS* # ORIGINAL: g12591.t1 original gene structure, not modified by PASA NODE_2750_length_5243_cov_49.243 AUGUSTUS gene 110 5121 . - . ID=g12591;Name=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS mRNA 110 5121 . - . ID=g12591.t1;Parent=g12591;Name=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 4981 5121 . - . ID=g12591.t1.exon1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 4981 5121 . - 0 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 4686 4770 . - . ID=g12591.t1.exon2;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 4686 4770 . - 0 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 4294 4395 . - . ID=g12591.t1.exon3;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 4294 4395 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 4072 4170 . - . ID=g12591.t1.exon4;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 4072 4170 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 3756 3854 . - . ID=g12591.t1.exon5;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 3756 3854 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 3335 3442 . - . ID=g12591.t1.exon6;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 3335 3442 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 2288 2428 . - . ID=g12591.t1.exon7;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 2288 2428 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 1716 1770 . - . ID=g12591.t1.exon8;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 1716 1770 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 1372 1454 . - . ID=g12591.t1.exon9;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 1372 1454 . - 1 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 848 973 . - . ID=g12591.t1.exon10;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 848 973 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 443 580 . - . ID=g12591.t1.exon11;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 443 580 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS exon 110 247 . - . ID=g12591.t1.exon12;Parent=g12591.t1 NODE_2750_length_5243_cov_49.243 AUGUSTUS CDS 110 247 . - 2 ID=cds.g12591.t1;Parent=g12591.t1 #PROT g12591.t1 g12591 MCDALRPKLAATEAAATAKELAIVPLPGTATPRARNAPWAILAKVARNGECDGGLTGKGMCKSCSTGFYGPNCDKPITCAHGTSVSDGTSGTGLCLTCETGWYGPNCDMPCTCKNGVCKNGIDGDGKCSACRSSFYGINCDKAVTCINGVASNGTAGTGLCTSCDVGYYGVNCEAACKCNAVNGICSDGISGDGNCKSCNKPTAFGTLCDKKCNCTGRACYGNTNGNGTCFGQCPDPRRSQQLECADCTQQYWGTNCSTCTCQKGTCKDNTDGDGTCSSCSAGYKDINCDKCSDGYYRSGAACLACTCKHGVCDIQTGKCSGACDDGWTGEDCDVCAQGFAGRECRACSCVHGECDQGLTNSGFCKNNTCSAGYEGLDCQLCIVNRFGSACDACTCLNGLCNDGLKGSGTCVQNSCLKGWAGDNCDACAPGYYGPACA # ORIGINAL: g8121.t1 original gene structure, not modified by PASA NODE_3098_length_4322_cov_44.7376 AUGUSTUS gene 773 4227 . + . ID=g8121;Name=g8121.t1 NODE_3098_length_4322_cov_44.7376 AUGUSTUS mRNA 773 4227 . + . ID=g8121.t1;Parent=g8121;Name=g8121.t1 NODE_3098_length_4322_cov_44.7376 AUGUSTUS exon 773 3597 . + . ID=g8121.t1.exon1;Parent=g8121.t1 NODE_3098_length_4322_cov_44.7376 AUGUSTUS CDS 773 3597 . + 0 ID=cds.g8121.t1;Parent=g8121.t1 NODE_3098_length_4322_cov_44.7376 AUGUSTUS exon 3833 4227 . + . ID=g8121.t1.exon2;Parent=g8121.t1 NODE_3098_length_4322_cov_44.7376 AUGUSTUS CDS 3833 4227 . + 1 ID=cds.g8121.t1;Parent=g8121.t1 #PROT g8121.t1 g8121 MTSPEGDANSLSHPSSVGSLRASVVIAQNAISTSEDIEPVISTLAQVSLLLPRGNPRLQCGEDASRVYAGGALWHGHPVIPDGVDIPALRTAFAAEGIYAKFAEFLLRRMPVEWLPGFDSDQRASFFDVFFDEGPPTECLSVLSRAVTWPDAHPLTIKAITATLHSVIPRRIVEVLREQCALTGMTGGSKIKSMNASHMAMDSAIGLVLSLPDRAANTLQRDLPASLYPAAYARSLSQAIVCVADELALASPPPLLSRAQTTSTPNNNGAETLKANSDGSGDASGDSDGAFGIVFLRRLLARASSVGLSRAIVSHVIAHVVTLSGRIDFASLVATYARIFEVDDAAFEPVALAALNEAGRFRNPTAVAVARALFVGQIERRENVEYLFLTKFASVRCIPEPAHVVLVNVLAASPQLLSRAIARSVDHWRDPSHQRHASLEQRLHTTKGLLALFGIFAQWRACQATEGDKATFDRAVADAGTHTPADWLRLTMSAVQTHLQSAVVDVRVMGMVVAESFASVFATDSPLKFEYPSDEKAASFASSLQSLALKASWLIDEHTNTVAEDHFFVATALSGGADSSSPSSPLRSNRREDKDSHLPIGATVPPVSKNAATTSTTKTTTPTTTTTTDAGDPDADLIPFDMDEDDGELGDGTTTGSSGSTMRFGAAQQAAMAARRSDKLSFVRNCLEGLGVKDDPAKVEASLRALERAIEAHASEASDVAGKHNRADSYLGEDAARILLALHDEFATEGFETLRRRALAAAVVRWPTGAGELLAREFYGDNYTLTQRLDCLDALIDAARRLSDARPSTGSYIEDAREAQRRAAKGESGGGASDSLPLSNSTASAGASTTHAPSQQTSSSVSGKKDETPLEAAKRLREMRIEAKTRRFASPRRAPPVTRPNRFAAVAQRWFYTLINGYDGRPWTRQTASSASSGDRRSDGDGRHVRLGFRGRLEVDVEEESRFRVTRELLLAHRVALENVRGNRPDIIGEESMLLGKLAYSLGTFVSCVSNQPMVGGMGRALIEFVWTLRYHSDPSVRRALVYDVAMVASSLPAYTLLVEMQEEVGEVQQWLQ # PASA_UPDATE: g5964.t1, single gene model update, valid-1, status:[pasa:asmbl_5231,status:12], valid-1 NODE_2917_length_4739_cov_38.5903 . gene 95 3043 . - . ID=g5964;Name=g5964.t1 NODE_2917_length_4739_cov_38.5903 . mRNA 95 3043 . - . ID=g5964.t1;Parent=g5964;Name=g5964.t1 NODE_2917_length_4739_cov_38.5903 . five_prime_UTR 2837 3043 . - . ID=g5964.t1.utr5p1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 2678 3043 . - . ID=g5964.t1.exon1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 2678 2836 . - 0 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 2183 2340 . - . ID=g5964.t1.exon2;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 2183 2340 . - 0 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 1500 1886 . - . ID=g5964.t1.exon3;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 1500 1886 . - 1 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 1069 1198 . - . ID=g5964.t1.exon4;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 1069 1198 . - 1 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 732 840 . - . ID=g5964.t1.exon5;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 732 840 . - 0 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 381 501 . - . ID=g5964.t1.exon6;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 381 501 . - 2 ID=cds.g5964.t1;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . exon 95 185 . - . ID=g5964.t1.exon7;Parent=g5964.t1 NODE_2917_length_4739_cov_38.5903 . CDS 95 185 . - 1 ID=cds.g5964.t1;Parent=g5964.t1;3_prime_partial=true #PROT g5964.t1 g5964 MADAAAKPVDAAVESKLRSFPRKCAERVKKALTPPSIATVKATLKGPYDKDAPIVARWRRVYLFAAAYTLFSVPISAAFYDHVHTTTWLTLDYIADVIFIVDILIRLRRTYRDEYGQLHESQEEITKKYLRSWLLFDIATAIPIDLPLRLVGNYRMWGLLRLARLGRTRSFAVWFWDLDIPHISVPVGRLVKNIIIIVYLAHWNACFFYLVSESEGTEENWVYRHHEDADGFTGTMHGIEVPLIERHMWAQYSYSYFWAMRINFFIFRDSYRTDRERAYLMVEWLIAFVLFGSIFGNLGWIIKLMDTKVAGTEQRIMSQQHKLSSLRTFMQGYNFPVDMQRQVLDHEKFVWMVRSGMDEATLFSDLPTMLQQEIGNFLYGPLIEK # PASA_UPDATE: g13873.t1, single gene model update, valid-1, status:[pasa:asmbl_3384,status:3], valid-1 NODE_2054_length_7909_cov_39.3401 . gene 4915 6250 . + . ID=g13873;Name=g13873.t1 NODE_2054_length_7909_cov_39.3401 . mRNA 4915 6250 . + . ID=g13873.t1;Parent=g13873;Name=g13873.t1 NODE_2054_length_7909_cov_39.3401 . five_prime_UTR 4915 5417 . + . ID=g13873.t1.utr5p1;Parent=g13873.t1 NODE_2054_length_7909_cov_39.3401 . exon 4915 5590 . + . ID=g13873.t1.exon1;Parent=g13873.t1 NODE_2054_length_7909_cov_39.3401 . CDS 5418 5590 . + 0 ID=cds.g13873.t1;Parent=g13873.t1 NODE_2054_length_7909_cov_39.3401 . exon 5719 6250 . + . ID=g13873.t1.exon2;Parent=g13873.t1 NODE_2054_length_7909_cov_39.3401 . CDS 5719 6091 . + 1 ID=cds.g13873.t1;Parent=g13873.t1 NODE_2054_length_7909_cov_39.3401 . three_prime_UTR 6092 6250 . + . ID=g13873.t1.utr3p1;Parent=g13873.t1 #PROT g13873.t1 g13873 MAVVVASLSACIARQPLLANTALYSSLFLAGDVVQQRLEGHTVDWMRAARMGAVGLVLGPFHHHWYAFIDRRLPSSQGIINVVKKVTVDQALFAPFCILSFFGGVATLEGKPAADVKEEVGRKFWPTYKVDCAIWPVAQVLNFYFVPSQLRVAYVGTATLFWNVFLSHMKHSHAKIPIHTH* # PASA_UPDATE: g13870.t1, single gene model update, valid-1, status:[pasa:asmbl_3383,status:12], valid-1 NODE_2054_length_7909_cov_39.3401 . gene 11 1532 . + . ID=g13870;Name=g13870.t1 NODE_2054_length_7909_cov_39.3401 . mRNA 11 1532 . + . ID=g13870.t1;Parent=g13870;Name=g13870.t1 NODE_2054_length_7909_cov_39.3401 . five_prime_UTR 11 11 . + . ID=g13870.t1.utr5p1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . exon 11 71 . + . ID=g13870.t1.exon1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . CDS 12 71 . + 0 ID=cds.g13870.t1;Parent=g13870.t1;5_prime_partial=true NODE_2054_length_7909_cov_39.3401 . exon 521 592 . + . ID=g13870.t1.exon2;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . CDS 521 592 . + 0 ID=cds.g13870.t1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . exon 760 846 . + . ID=g13870.t1.exon3;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . CDS 760 846 . + 0 ID=cds.g13870.t1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . exon 982 1119 . + . ID=g13870.t1.exon4;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . CDS 982 1119 . + 0 ID=cds.g13870.t1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . exon 1251 1532 . + . ID=g13870.t1.exon5;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . CDS 1251 1361 . + 0 ID=cds.g13870.t1;Parent=g13870.t1 NODE_2054_length_7909_cov_39.3401 . three_prime_UTR 1362 1532 . + . ID=g13870.t1.utr3p1;Parent=g13870.t1 #PROT g13870.t1 g13870 PGTQCWSRWAKRLRQTQGTKWCEAEYLLTVARWEHYGATLYRVEERIVAEEIYRPLFLAIGESSIWLLDSETLKPLSSYDYHRLLSFGASGKDFMLVVNSTRRGSEKTTTEKRLFRMQQVRDATNLVASYINAIVRREGITCSVASISMLPGGGL* # ORIGINAL: g13871.t1 original gene structure, not modified by PASA NODE_2054_length_7909_cov_39.3401 AUGUSTUS gene 2252 3031 . + . ID=g13871;Name=g13871.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS mRNA 2252 3031 . + . ID=g13871.t1;Parent=g13871;Name=g13871.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS exon 2252 3031 . + . ID=g13871.t1.exon1;Parent=g13871.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS CDS 2252 3031 . + 0 ID=cds.g13871.t1;Parent=g13871.t1 #PROT g13871.t1 g13871 MAFRLPNIENVPFVPLDCGKQADTISQDAASAQTADLGINNNDKSENDCEASGVPNFPTTTQDTSIEQASGSTGGRSLGSPPRGDVDVHASNGDQHGPATQAPLDRGQLPSTEEGTVPSREQDPSELTVVAATAFDTVSPRSTDTEDSQSESEGSSLSSAVSNAPIDRVLKGHTDLVTSLSLSPDGLSLASGSDDRTVRIWNVQTGANTHTFRLHTSFISSVSFSPDGGSLASGGLDGAVHLWNVHTPTCVRTLTNDPM* # ORIGINAL: g13872.t1 original gene structure, not modified by PASA NODE_2054_length_7909_cov_39.3401 AUGUSTUS gene 3119 4318 . + . ID=g13872;Name=g13872.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS mRNA 3119 4318 . + . ID=g13872.t1;Parent=g13872;Name=g13872.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS exon 3119 4318 . + . ID=g13872.t1.exon1;Parent=g13872.t1 NODE_2054_length_7909_cov_39.3401 AUGUSTUS CDS 3119 4318 . + 0 ID=cds.g13872.t1;Parent=g13872.t1 #PROT g13872.t1 g13872 MGECILTLIGHTRPVWAVAFSPDGGTIASGGEDCNVRLWDTNTGDCRHRLSHDGTVWTVAFSPDGATIATGGEDSSVCLWNAHTAELVKQLCSHEEAVLSVTFSGDGGYLFSGGEDQRVVVWDMDSTSPSSASSRHTGADVFGIALSRDGTWMATTRRQTITFASVDAIVDGTASDGSETILFSGTRDYAFDDDDDDDDSDEDDDDDDREDDDDGDEDDDDAVARDLNLLRSDTEIEDIDDDGDDHRSAEDETDGDGEEESSPLRRRRNRMHHAMPSIARLRQHVLSDEEVVGTDEGDKVVRRTSISIPNAVVDEAIYEELPLGAIGGCVACLNRIVCTVVVPCGHACMCITCARELVLTTTGAVRSCPLCKCQMQSVLRLYLPDGSSANTHKHRTAQA* # PASA_UPDATE: g13874.t1, single gene model update, valid-1, status:[pasa:asmbl_3386,status:12], valid-1 NODE_2054_length_7909_cov_39.3401 . gene 6372 7698 . - . ID=g13874;Name=g13874.t1 NODE_2054_length_7909_cov_39.3401 . mRNA 6372 7698 . - . ID=g13874.t1;Parent=g13874;Name=g13874.t1 NODE_2054_length_7909_cov_39.3401 . five_prime_UTR 7605 7698 . - . ID=g13874.t1.utr5p1;Parent=g13874.t1 NODE_2054_length_7909_cov_39.3401 . exon 7569 7698 . - . ID=g13874.t1.exon1;Parent=g13874.t1 NODE_2054_length_7909_cov_39.3401 . CDS 7569 7604 . - 0 ID=cds.g13874.t1;Parent=g13874.t1 NODE_2054_length_7909_cov_39.3401 . exon 6372 7348 . - . ID=g13874.t1.exon2;Parent=g13874.t1 NODE_2054_length_7909_cov_39.3401 . CDS 6509 7348 . - 0 ID=cds.g13874.t1;Parent=g13874.t1 NODE_2054_length_7909_cov_39.3401 . three_prime_UTR 6372 6508 . - . ID=g13874.t1.utr3p1;Parent=g13874.t1 #PROT g13874.t1 g13874 MIWHVYASPNTKVKYQVHVGDGFNPATDGKFVRVTPHSIDPNTGSALETPVFLDASGADFSTDVAVVNGTLFLTLDHSKIASDYNFTARGANEKCIPRDVCQISADQQSCVASDAFTAKEPQLADEMSRICGYWASRAAGMYPGEQTTFADCPASGCLGYAFKMPTAFVPQPYASVGAKLTSCFPRSRSWGVSLKSTPGDASCPPPSPSSGYCPSPNTNAVPSKGADYPGSIVPGLRGPGALVRLFDFGEDAEGFGAIQEDSTDTERWQAAMQSWRAAFEEYKKSTEGQCA* # PASA_UPDATE: g14330.t1, single gene model update, valid-1, status:[pasa:asmbl_5048,status:12], valid-1 NODE_2802_length_5086_cov_49.4133 . gene 79 362 . + . ID=g14330;Name=g14330.t1 NODE_2802_length_5086_cov_49.4133 . mRNA 79 362 . + . ID=g14330.t1;Parent=g14330;Name=g14330.t1 NODE_2802_length_5086_cov_49.4133 . five_prime_UTR 79 80 . + . ID=g14330.t1.utr5p1;Parent=g14330.t1 NODE_2802_length_5086_cov_49.4133 . exon 79 362 . + . ID=g14330.t1.exon1;Parent=g14330.t1 NODE_2802_length_5086_cov_49.4133 . CDS 81 335 . + 0 ID=cds.g14330.t1;Parent=g14330.t1;5_prime_partial=true NODE_2802_length_5086_cov_49.4133 . three_prime_UTR 336 362 . + . ID=g14330.t1.utr3p1;Parent=g14330.t1 #PROT g14330.t1 g14330 VKQVVNETHMLLRAQSTATFRSLALYLGNRDTECVLFRPIAASIVESYQQLVSLLDAEYTPEDREIIGCPAIEHIRLMLAPPTS* # ORIGINAL: g14332.t1 original gene structure, not modified by PASA NODE_2802_length_5086_cov_49.4133 AUGUSTUS gene 2374 4996 . + . ID=g14332;Name=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS mRNA 2374 4996 . + . ID=g14332.t1;Parent=g14332;Name=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 2374 2436 . + . ID=g14332.t1.exon1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 2374 2436 . + 0 ID=cds.g14332.t1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 2678 2774 . + . ID=g14332.t1.exon2;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 2678 2774 . + 0 ID=cds.g14332.t1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 2874 2977 . + . ID=g14332.t1.exon3;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 2874 2977 . + 2 ID=cds.g14332.t1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 3092 3242 . + . ID=g14332.t1.exon4;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 3092 3242 . + 0 ID=cds.g14332.t1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 3474 3616 . + . ID=g14332.t1.exon5;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 3474 3616 . + 2 ID=cds.g14332.t1;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS exon 3764 4996 . + . ID=g14332.t1.exon6;Parent=g14332.t1 NODE_2802_length_5086_cov_49.4133 AUGUSTUS CDS 3764 4996 . + 0 ID=cds.g14332.t1;Parent=g14332.t1 #PROT g14332.t1 g14332 MASYTGDFRLPFLPGNTFNTRHVSAVLDPKFHKSHAFDYSNKVSVFDEAKPGIGGEPLLNQDRTKKTSFYPTTEGGETMPAWVAFDRQVLRFDSYFEEPVNDKREEQYRIRRCLVYFYLEDDTVQVVEPRQKNSGIPQGTLIRRHRIPLPEPDNDRFYTVEHFNIGKEISLYGRIFRLIDADQFSKNFLAKLGVKLGEGEALPGDPYSQHRAKQLSTMKPRRPYERVDTLRQFLDNDRRVLRFYCCWDDSANIFGDARDMVLHYFLADDTIEIRENVGQNSGRDHTPSFLRRQKLPRAFAGPQGPGGKVDDCYTDKDLAIGAVITVYGRRFLLCDCDEATKDYYRQRYAVSEFEPITYKADAPQPQQRTFPPYNGFGSEDDSLGSCLSLIPKPPRKDFNKIMSNDAMVLRYAARLRSAKHVDAERRFIISYFLADDTIAVWEPQQRNSGIMGGRFMERRQVKRDGTDAHLGASDFYVGGVVSLNKHEFVLFDADEYALNYMEEHGDEFPFSNLYAIEQKLIGSSRSQGAAGQARAVFEALDTQGRGYVTAQEFKEGLVRAGFALAEQERLTLARFFDRARDNRCDYREFVARVTSY* # PASA_UPDATE: g14331.t1, single gene model update, valid-1, status:[pasa:asmbl_5049,status:12], valid-1 NODE_2802_length_5086_cov_49.4133 . gene 519 1685 . - . ID=g14331;Name=g14331.t1 NODE_2802_length_5086_cov_49.4133 . mRNA 519 1685 . - . ID=g14331.t1;Parent=g14331;Name=g14331.t1 NODE_2802_length_5086_cov_49.4133 . five_prime_UTR 1630 1685 . - . ID=g14331.t1.utr5p1;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . exon 1602 1685 . - . ID=g14331.t1.exon1;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . CDS 1602 1629 . - 0 ID=cds.g14331.t1;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . exon 1392 1462 . - . ID=g14331.t1.exon2;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . CDS 1392 1462 . - 2 ID=cds.g14331.t1;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . exon 519 1286 . - . ID=g14331.t1.exon3;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . CDS 870 1286 . - 0 ID=cds.g14331.t1;Parent=g14331.t1 NODE_2802_length_5086_cov_49.4133 . three_prime_UTR 519 869 . - . ID=g14331.t1.utr3p1;Parent=g14331.t1 #PROT g14331.t1 g14331 MLIYKDIISGDELASDGFPMKLVKDLYYEIEGKMITVGAGIDESLIGGNASAEGEDGEDGVADGAQSVINIVYSHRLCETSFDKKSYMAYVKEYMKKVKKHLEENNPERVEIFTKGMPEVVKEILANFSNYNFYTGESMNVDGLVALLNYREDGVTPFFIVFKDGVKAEKV* # ORIGINAL: g4445.t1 original gene structure, not modified by PASA NODE_1444_length_11238_cov_42.8927 AUGUSTUS gene 322 1385 . - . ID=g4445;Name=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS mRNA 322 1385 . - . ID=g4445.t1;Parent=g4445;Name=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 1289 1385 . - . ID=g4445.t1.exon1;Parent=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 1289 1385 . - 0 ID=cds.g4445.t1;Parent=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 901 1049 . - . ID=g4445.t1.exon2;Parent=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 901 1049 . - 2 ID=cds.g4445.t1;Parent=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 322 774 . - . ID=g4445.t1.exon3;Parent=g4445.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 322 774 . - 0 ID=cds.g4445.t1;Parent=g4445.t1 #PROT g4445.t1 g4445 MAGAFAYTEVVATDGGPSGGGGLPMMGSFSPNGELILGARLPSSLVGGTSLCAPSEANHNSVWAIRQNPNVFGDERNSMDDLSESSSPRETFELLWRNGLPVVIDLVARVDGRDNSPFFETSESVVVERWTVSIESEGAFLDAPDDCEGGRSRFGSFRMGSPEGIALRHHGSFPCELASSPDAMGGGRSSGHINHRPGCDASRVMEAIQEYVSLTSVEFGVAIAGAECVKHR* # ORIGINAL: g4446.t1 original gene structure, not modified by PASA NODE_1444_length_11238_cov_42.8927 AUGUSTUS gene 2654 10626 . - . ID=g4446;Name=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS mRNA 2654 10626 . - . ID=g4446.t1;Parent=g4446;Name=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 10531 10626 . - . ID=g4446.t1.exon1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 10531 10626 . - 0 ID=cds.g4446.t1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 10112 10367 . - . ID=g4446.t1.exon2;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 10112 10367 . - 0 ID=cds.g4446.t1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 3728 9945 . - . ID=g4446.t1.exon3;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 3728 9945 . - 2 ID=cds.g4446.t1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 3388 3516 . - . ID=g4446.t1.exon4;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 3388 3516 . - 0 ID=cds.g4446.t1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 2999 3114 . - . ID=g4446.t1.exon5;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 2999 3114 . - 0 ID=cds.g4446.t1;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS exon 2654 2873 . - . ID=g4446.t1.exon6;Parent=g4446.t1 NODE_1444_length_11238_cov_42.8927 AUGUSTUS CDS 2654 2873 . - 1 ID=cds.g4446.t1;Parent=g4446.t1 #PROT g4446.t1 g4446 MARRCSSEDWTGDFDDVAATRTNPHESKSDIKDYTSGSINSLATNNSSSDFGSDFGEDAAQKLSDAVHKTGLGNHPAVEPPKPVFPRLSSNSTRPMSLVDIADFEWDSDDNGDAPHSVQSALTVHSTPSAENADQLDLASKGGRRASQYDARSLSTVVTAALAASNAPSTLNSDALSGEADRVSEHPGEGGTNGDAGGSDVSDGADDDGEDWDAELGIDTTAMRSTLRAMLSPAAGADVDSSAASSPGHADQGVPTPFGQIRDCDRLFHMLVPQGDDQRGLSLPSTPSFQLPRVSLVVNYDKGTCTVHVAPTQSANGGSVFADMEEQCDWVYRLASRIAGDATASHMAPSGSGQWSTSGREDASSPSSRQQSRRSSRVAGIATARRQMQQHVSGLVKQQLDQQKEAVFERRIASSSRMSVAWVDAHVAYCDHLMVVGAGDQCVAVAQRLVTQVKEAASVAIAAGASSSSAVPEHCRQGALAALRLVARSWSPSRDARFVALCESVSSIMSSGKAVVQELVALLTTECRAHYGRSSSWAEVEPRLLELAGRLHVWALALEAGDDTVQRHVIDASDDDLAVSADTLADIQLILHSCSPLTCSPTSTGDGASASVSAALHSGTESAPSSRTNSGNHDLQAQTQRPRDSTPAATTTTPSRGGGSSQSSQMLGLPEGGAGSDERVPGQRKSRVIDMGDDGGRLLRDADARSSVLGAMYARLPIHSLVKAKVAYALAMHAWHDLGDVERAEVLFLESARICECVLEALSPGPLVAGGDVLLHAHRSASASSIGAELSGETSAAGDTAAVCTTGSQNTYKTTTLVCKGSLSAHGLSQSLVAEVASNAVAGLGEVLMSRNAYLPAVRSLEASLVAGRRGMTAAQRYARVRWLAGVCSARSDLWRALRLYSRVLRQVRADGRENEATHVALVVADAYADVGNHRDAEVCLLEALAFLNATPAQRVDGNNFSMSPPPQSGLDAAGVGLTGRPNPLRQMLQLRLARLHAEGFDLDGGIAALETWLLSPNAQAPSSRTAALKSMLAASYAKKRWFSQTLSILAPPSFTMAPGSGGADGGNTAPASLHAVEGGVDRSHSDPAKLRSSLRARSTSMPHPMPEEGRERTVSDPTKGAVYGPPQSNTLQHQQQQQQQQQYSAEEPRRIRHSPSFFFAAFEGSADMSAGATTVTPGGVALSRVASASTTGLGYWRMAATVHLRDGSPALAIACIEYGMLSVARGAIGGSVSVRDCVALLPSLPGTTRAEVDLLRAKALASVVVHAPADAFPWKIPALDSCSDTDANGDGDAGGSVLVSGRLFSSRYEVLRDCARHFSSAIALFAAGGNVVASSKARVAMTAALLDHAVSRHVLGGCPVESVAFRTGDGGTAPFIVCRPPPSSFPAGSETPTTDPDGTCISLDDIERCARDALDAASALYYPLLIISAQLCLAEVRVLSGAVEEARAFWKESRDCFLALYGTAPAHEPPTPASAPPGHVERLFTIASRLVRLHLRLSPCAPGPADGTKQPDPLTSDPMLIDSFLRLQSGSEVAPRRRNVDGKLATPPMSSTSTVSTQSASTRVVSPDESRDTHAGHSLSAGPSASAVNGVNPLPSYSTFPPAMSRQKPQRAAAASVFARDSTDDIPSVADDRNANDSRKYSQQTLKVYSPSRNGAGAVEGSALSAIAQSLGATRSDEDLLSLKPTPRGPAQRQQQRRAGALGDDVGDAVFACETRMRRALKRYAVGELSAEDLRRTCREATEDMVSVTAAARRDLEDVLSSDVAVADRLAAASLDHAAVGAGDPSASAPLSRTLVVMSLFSHIVAVGPHVSSNGWSSRHLCGIDDGRMRVDTDGSRKSEMQFKSKLSLKLFADGKSKKAATISGTGDLAGLQSGRGGRRSKLPDAPHADTEGRLSRELCDFVTELVARPRELYGSRRAKLRKQRMDPASTDGDGGFGDASVQFALSNFCHVAAPWVSHVISALVPPLRTDSEAPTPTSGATTATATTAEVAGGDGGGDAQSRARLPHRSQAFADHSNSGTSKRRSIFGFFGVSAGGASEASMGQTGPPLPAHPLLFVCSRALHAFPWEMVLSADGMPPLVRGFSLCASLSSERDRQRRALQYASQKSTRPPTDVAEEDAGSNPGGQPPAGDADSALQQSPRLGGDLRLPEFFAPAYSLESREARKGAERARRGYLLRDLWVRVGIVDHCLERSRYSMSNRPFQSSLVKSLKSKPRAPKFLHFLDLSLVGDTPEDLVRGIIFGLGKGCYPVFLCTFADLLEMGECLTTILGDLNQCVVVAVPSSRMKDFARILGKTQEMLSKGSRKGLKGALALVKNPYQYLFHVLGDIQRQLRIPIAVFNAP* # ORIGINAL: g8526.t1 original gene structure, not modified by PASA NODE_4149_length_2118_cov_36.6397 AUGUSTUS gene 193 1870 . - . ID=g8526;Name=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS mRNA 193 1870 . - . ID=g8526.t1;Parent=g8526;Name=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS exon 1757 1870 . - . ID=g8526.t1.exon1;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS CDS 1757 1870 . - 0 ID=cds.g8526.t1;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS exon 1541 1648 . - . ID=g8526.t1.exon2;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS CDS 1541 1648 . - 0 ID=cds.g8526.t1;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS exon 1022 1136 . - . ID=g8526.t1.exon3;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS CDS 1022 1136 . - 0 ID=cds.g8526.t1;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS exon 491 643 . - . ID=g8526.t1.exon4;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS CDS 491 643 . - 2 ID=cds.g8526.t1;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS exon 193 362 . - . ID=g8526.t1.exon5;Parent=g8526.t1 NODE_4149_length_2118_cov_36.6397 AUGUSTUS CDS 193 362 . - 2 ID=cds.g8526.t1;Parent=g8526.t1 #PROT g8526.t1 g8526 MASLYRAMHTPGMLTSALLRHRSAAIGWRPDATGRLIQHRGLPLPFSRGSKTHTGKHHQQRPQPTPKETARKAVSTAATLPQSHSSAAAGTDNNAPPNKLEPQTLIGAFGFLGTLPLIASTAAMWNGDAAYAVWVTDLQLHYSACLLSSLGAVHLGFEAAGYGGSMPKQRCFAAAAPIAAAFLSLYMPQPIAVFVHLGAYPFTLAADMYFVKLSLAPAW* # PASA_UPDATE: g3406.t1, single gene model update, valid-1, status:[pasa:asmbl_5439,status:12], valid-1 NODE_3024_length_4508_cov_41.8947 . gene 2527 4396 . + . ID=g3406;Name=g3406.t1 NODE_3024_length_4508_cov_41.8947 . mRNA 2527 4396 . + . ID=g3406.t1;Parent=g3406;Name=g3406.t1 NODE_3024_length_4508_cov_41.8947 . five_prime_UTR 2527 2698 . + . ID=g3406.t1.utr5p1;Parent=g3406.t1 NODE_3024_length_4508_cov_41.8947 . exon 2527 4396 . + . ID=g3406.t1.exon1;Parent=g3406.t1 NODE_3024_length_4508_cov_41.8947 . CDS 2699 4396 . + 0 ID=cds.g3406.t1;Parent=g3406.t1;3_prime_partial=true #PROT g3406.t1 g3406 MKSPPLATDDRLTASTVSVHARSSRIFRTSIIFFATAFLLTAAAVSLYTSAIVSDRIARATSGSWIPSQEHPMPSSAIRVPAAVSSDHIFKECTLGSPLPPSPVAFDACALERCASAVSTVASLTFLPCHPHYINASLVTIAVEPERDALTVTVLIRLRNNANVGRGAIASVPPFVGALLRGKLSCRTCHNIIDPALSIQVYAYSYDHCDGQYSLSFMGLPREMNNGDLSVMPLYANYAHYVSTGDRCNRTLPGHIKVMPDSLGSLSCKSPRETTMLLAENILLGTNGSGHGNPGSKFSAMPPIMPPAQNISSTRRGLHAYGCTLPVRPTDPLSAKRSSNGWEYKATNHLSLCRTQGLDDGRWVLRSRPSDNRDGHRTSSDGDIERQDPCRQGGTPHAKLLWDHDNYAWCPYNCALRYYDASDVDTCFRRRNWTTAVFFGDSRMRNQFCDLRNRLSRASPGNPNDSDGPQYGCVSNGSVEFSVANAVFKLTTAWGYYPDVDHAPDECQYDEATRNNGTAFYLAKRRSLGRKDGPRLLQSVFENRPRNTSGTGADLVIISEGLHSMQ # PASA_UPDATE: g3405.t1, single gene model update, valid-1, status:[pasa:asmbl_5440,status:12], valid-1 NODE_3024_length_4508_cov_41.8947 . gene 636 2011 . - . ID=g3405;Name=g3405.t1 NODE_3024_length_4508_cov_41.8947 . mRNA 636 2011 . - . ID=g3405.t1;Parent=g3405;Name=g3405.t1 NODE_3024_length_4508_cov_41.8947 . exon 1828 2011 . - . ID=g3405.t1.exon1;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . CDS 1828 2011 . - 0 ID=cds.g3405.t1;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . exon 1567 1665 . - . ID=g3405.t1.exon2;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . CDS 1567 1665 . - 2 ID=cds.g3405.t1;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . exon 1213 1296 . - . ID=g3405.t1.exon3;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . CDS 1213 1296 . - 2 ID=cds.g3405.t1;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . exon 636 921 . - . ID=g3405.t1.exon4;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . CDS 857 921 . - 2 ID=cds.g3405.t1;Parent=g3405.t1 NODE_3024_length_4508_cov_41.8947 . three_prime_UTR 636 856 . - . ID=g3405.t1.utr3p1;Parent=g3405.t1 #PROT g3405.t1 g3405 MGAPEASPVLALGTVVVDGVDAPLHAPSLRDGDVFAAKSLVAFETLDRSSPELWPTEPAIAGAHVPLDRRISTPPPLEGRLREISEQDEDSIMREFGLLPSTEMLNRIKDLENLAYQLGLDEAYEMTKGKLLNVLGQGQPVPK* # ORIGINAL: g10477.t1 original gene structure, not modified by PASA NODE_2146_length_7511_cov_40.2188 AUGUSTUS gene 7003 7284 . - . ID=g10477;Name=g10477.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS mRNA 7003 7284 . - . ID=g10477.t1;Parent=g10477;Name=g10477.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 7003 7284 . - . ID=g10477.t1.exon1;Parent=g10477.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 7003 7284 . - 0 ID=cds.g10477.t1;Parent=g10477.t1 #PROT g10477.t1 g10477 MVRSFGANRKDATLRELSSLVREVHEPARRRGVVLEFAEVTSDRSGRHVLRELGQTVVGKRSEDDAKTLGDLKFRIGSFMDVSINTRAAARPY* # ORIGINAL: g10476.t1 original gene structure, not modified by PASA NODE_2146_length_7511_cov_40.2188 AUGUSTUS gene 1138 6026 . + . ID=g10476;Name=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS mRNA 1138 6026 . + . ID=g10476.t1;Parent=g10476;Name=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 1138 1158 . + . ID=g10476.t1.exon1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 1138 1158 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 1525 1734 . + . ID=g10476.t1.exon2;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 1525 1734 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 1970 2132 . + . ID=g10476.t1.exon3;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 1970 2132 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 2369 2507 . + . ID=g10476.t1.exon4;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 2369 2507 . + 2 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 2860 3037 . + . ID=g10476.t1.exon5;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 2860 3037 . + 1 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 3262 3439 . + . ID=g10476.t1.exon6;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 3262 3439 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 3747 3849 . + . ID=g10476.t1.exon7;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 3747 3849 . + 2 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 4071 4191 . + . ID=g10476.t1.exon8;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 4071 4191 . + 1 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 4458 4597 . + . ID=g10476.t1.exon9;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 4458 4597 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 4759 4877 . + . ID=g10476.t1.exon10;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 4759 4877 . + 1 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 5149 5275 . + . ID=g10476.t1.exon11;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 5149 5275 . + 2 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 5418 5496 . + . ID=g10476.t1.exon12;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 5418 5496 . + 1 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 5705 5775 . + . ID=g10476.t1.exon13;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 5705 5775 . + 0 ID=cds.g10476.t1;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS exon 5954 6026 . + . ID=g10476.t1.exon14;Parent=g10476.t1 NODE_2146_length_7511_cov_40.2188 AUGUSTUS CDS 5954 6026 . + 1 ID=cds.g10476.t1;Parent=g10476.t1 #PROT g10476.t1 g10476 MADISAQVEDLKKKGNTAFSGGDHQTAVRLFTDAIKLDPSNHVLFSNRSAAYASLKQYEDALNDANETVRLKPDWAKGYSRQGAAFAFLRRYEDAAESYQRGLQIEPENAQLKAGLEDAERVLSQDAGPGADALFGNMFQGDVFAKLAANPTTAKFLAEKDFVDLVNELQRNPKKLGMHLQDRRVLAMVGALMGIDTQSADDPMDIDRERERAQEEREAQRKKEAEQKAKEEEARRKAEEAARPLTEEDKLKQQALKEKDLGNDAYKRKSFEEAIKHYDAAIALDATNMTFYTNRAAVFFETGDHAKCIADCEKAIEVGREHKADYTNIAKAYARMGNSYLKQDKLDEAFAYFSKSLSEHRTPEVLKRVQQLEKQLKEKRLKDYIDPEKAAEEREKGNELFKKGDFVGAIQHYSEAVKRNPEDARVYSNRAACYTKLMEYSLGLKDCEECLKRDPKFVKGYTRRGAIQFLLKEYYKALEAYETALSIEPGNKEAEEGRFRCFEAIQQTGEPPEERAKRAMHDPEIQEIMKDPIMRQILEQMKESPAAAQDHLKNPIVAQRIQKLVNAGIIQMR* # PASA_UPDATE: g9406.t1, single gene model update, valid-1, status:[pasa:asmbl_5305,status:12], valid-1 NODE_2958_length_4641_cov_44.2446 . gene 3420 4383 . + . ID=g9406;Name=g9406.t1 NODE_2958_length_4641_cov_44.2446 . mRNA 3420 4383 . + . ID=g9406.t1;Parent=g9406;Name=g9406.t1 NODE_2958_length_4641_cov_44.2446 . exon 3420 3636 . + . ID=g9406.t1.exon1;Parent=g9406.t1 NODE_2958_length_4641_cov_44.2446 . CDS 3420 3636 . + 0 ID=cds.g9406.t1;Parent=g9406.t1 NODE_2958_length_4641_cov_44.2446 . exon 3812 4383 . + . ID=g9406.t1.exon2;Parent=g9406.t1 NODE_2958_length_4641_cov_44.2446 . CDS 3812 4383 . + 2 ID=cds.g9406.t1;Parent=g9406.t1 #PROT g9406.t1 g9406 MADTVVKQGWLLKEGGGAITKWQRRWFVLRGTAIFYSKYQDDTNWLGTIYVEDIVGSEATTAKAHKNCFVVSCINRDYYLCGETKEEADDWVACIARAAQKIETGGDDAIPQFVTVEAFVSKGIRVCGPVSASLLSTLSGGVPGERKKRDERGWFCDRHVSACSVINTFLQYGYRLESVFPGETHGPLDATMVAANVIVFSKQPASVNRRTLMFGYGHRPMSGIHRCVDAFCPFVDKFLGWSLEAVVDFVCFHSFARIPIRT* # ORIGINAL: g9405.t1 original gene structure, not modified by PASA NODE_2958_length_4641_cov_44.2446 AUGUSTUS gene 281 2628 . - . ID=g9405;Name=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS mRNA 281 2628 . - . ID=g9405.t1;Parent=g9405;Name=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 2485 2628 . - . ID=g9405.t1.exon1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 2485 2628 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 2179 2298 . - . ID=g9405.t1.exon2;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 2179 2298 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 1828 1999 . - . ID=g9405.t1.exon3;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 1828 1999 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 1498 1631 . - . ID=g9405.t1.exon4;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 1498 1631 . - 2 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 1204 1278 . - . ID=g9405.t1.exon5;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 1204 1278 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 838 1029 . - . ID=g9405.t1.exon6;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 838 1029 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 570 655 . - . ID=g9405.t1.exon7;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 570 655 . - 0 ID=cds.g9405.t1;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS exon 281 395 . - . ID=g9405.t1.exon8;Parent=g9405.t1 NODE_2958_length_4641_cov_44.2446 AUGUSTUS CDS 281 395 . - 1 ID=cds.g9405.t1;Parent=g9405.t1 #PROT g9405.t1 g9405 MAMDPVAAQKERERLEKEQEEHLNKACKNAENAPKQKHIRDIRNELHRHNGGSIFWSAIRKLPLGAQPIMCWKAMICLHKVLQDGHPNVVKEFYAHKTMLQGLSQLWQQNHNPLTQLISAQIIFINSKLDFHHKHPEIMGNLNMEDYLRLNVTSNVDAAFALAVDLFELQEAVLFFQGKVLSSLSAALSTDKSEMRIAALVPLIHESEPLYNMLRDIMLKLHRQLSPSQLAGHRDRFTAQFADLKQFYFDAANIKYLNTLCRVPVLEDSPPNFLEQPNVPKPVEQPKPVPPPQVDAFASFGNFGDTFSFQSGPDERDRLIEQLRARIRELEAQHEADVALIASLRQ # PASA_UPDATE: g11898.t1, single gene model update, valid-1, status:[pasa:asmbl_4229,status:3], valid-1 NODE_23_length_61570_cov_40.7854 . gene 17188 23510 . - . ID=g11898;Name=g11898.t1 NODE_23_length_61570_cov_40.7854 . mRNA 17188 23510 . - . ID=g11898.t1;Parent=g11898;Name=g11898.t1 NODE_23_length_61570_cov_40.7854 . five_prime_UTR 23182 23510 . - . ID=g11898.t1.utr5p1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 23009 23510 . - . ID=g11898.t1.exon1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 23009 23181 . - 0 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 22781 22888 . - . ID=g11898.t1.exon2;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 22781 22888 . - 1 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 22578 22674 . - . ID=g11898.t1.exon3;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 22578 22674 . - 1 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 22247 22360 . - . ID=g11898.t1.exon4;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 22247 22360 . - 0 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 21815 21947 . - . ID=g11898.t1.exon5;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 21815 21947 . - 0 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 21592 21713 . - . ID=g11898.t1.exon6;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 21592 21713 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 21030 21315 . - . ID=g11898.t1.exon7;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 21030 21315 . - 0 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 20669 20848 . - . ID=g11898.t1.exon8;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 20669 20848 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 20312 20473 . - . ID=g11898.t1.exon9;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 20312 20473 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 19636 20098 . - . ID=g11898.t1.exon10;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 19636 20098 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 19306 19505 . - . ID=g11898.t1.exon11;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 19306 19505 . - 1 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 17584 19032 . - . ID=g11898.t1.exon12;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 17584 19032 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . exon 17188 17455 . - . ID=g11898.t1.exon13;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . CDS 17403 17455 . - 2 ID=cds.g11898.t1;Parent=g11898.t1 NODE_23_length_61570_cov_40.7854 . three_prime_UTR 17188 17402 . - . ID=g11898.t1.utr3p1;Parent=g11898.t1 #PROT g11898.t1 g11898 MASASPRPACIGARVSRPRPVHQWLAVCSFLFTSVLCVRGVIGVDLASDPLPAVRVWTPVAYSGDTFRPRCDHTSVIYNSKVYTFGGYSEAEGSFDDLFEFDPATSTMRAVPVTGATPIARSGHFGGLVGSLYVVAGGVNTDFELLDDIFYVDLASAEPLEWIQPTIANPQDKPVQRAWGTAVAVNSSTLFLFGGLGEKIYMFDSHFMDVTSWRWTRILYPCNGSDFDPVSVRDPVSLTFKSFTDDEIKEISTMSAELILGNTDSNCTALQSSVTTHNDLLISLAPANASDANAIAGLVSCSPLVLCPNITCPLPPPAEGVRSAMLNGTIYLYGGWKCAEFGSSDNIGGGPDCFSDDVYAFNVGDHTWKVLNVTGDESLESARKPPARAYATFQIVGDEAFVFGGFYRDLVRIDYFFNDLYILNLRTLVWRRVSAKGMTPGQRWSHTISFVNGTGYLIGGCKSPSTFYNTVDKLFGVTPDPSSSAANGLGISSPIVVGDFGNFRLSMVDRNAVHLTYGGGNVVAFGFERGGFAYFQGVVVDQQNGTYDVSFRSNKASDYLLSVQYEGRDIKGSPFNVTLKAGVPDVSLSHLRTDTALPVASVAVSVLVDIVDRYGNRADGSGLAIHANVTTPSGSQSTMVFSVVETGVLSSSFIPYVAGRHVVGVDVAGQRLTMAFDVQDAPRSSSNSNLVIYVSVPVAVVCGCLLVAAVGAFMYARRMAKLAAVYSAPVTLDLDGPVAKAIKVIEKIRTKKLNGQELANELNAVRDALLSDNMYQPVLDAATAQVKIGLESVEFLDDLMLTRLMPKSHRHGHGRHGRRDSMRAGSMRQLSVTNVSMAASSTGSMFFREGLPGSIEDNYDGHATNSVVSSLASVHRWDFNIFTLESATEGRPLCALTVEVFFRMGLMDAFLIDHGKLKRFLVAMEVGYHRHGAEYHTSTHAADVLQAMFVFLQNEQFASFFSPLEILAACLACVGHDLDHPGVTNNFLIATGDDLALLYSDTSVLENHHSAAFFQALQDPDANILEGLDHEEFRRARKLICSLILATDVAQHFEHLNKFKTRTASGQLLSATSDSDRLLLLVMAIKCADVSNPTKARDVYDKWTSRIMEEFFKQGDRERELGMPVSMFMDRASTNVAKCQNGFIEVIVAPIFRAFTEYIGMEEPRRNLDSNHAYWKAKI* # ORIGINAL: g11899.t1 original gene structure, not modified by PASA NODE_23_length_61570_cov_40.7854 AUGUSTUS gene 23994 42228 . - . ID=g11899;Name=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS mRNA 23994 42228 . - . ID=g11899.t1;Parent=g11899;Name=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 40965 42228 . - . ID=g11899.t1.exon1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 40965 42228 . - 0 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 40554 40866 . - . ID=g11899.t1.exon2;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 40554 40866 . - 2 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 40355 40456 . - . ID=g11899.t1.exon3;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 40355 40456 . - 1 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 38568 40171 . - . ID=g11899.t1.exon4;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 38568 40171 . - 1 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 36218 38439 . - . ID=g11899.t1.exon5;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 36218 38439 . - 2 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 35947 36065 . - . ID=g11899.t1.exon6;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 35947 36065 . - 0 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 31472 35829 . - . ID=g11899.t1.exon7;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 31472 35829 . - 1 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 30931 31335 . - . ID=g11899.t1.exon8;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 30931 31335 . - 2 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 29399 30773 . - . ID=g11899.t1.exon9;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 29399 30773 . - 2 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 29041 29179 . - . ID=g11899.t1.exon10;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 29041 29179 . - 1 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 26399 28795 . - . ID=g11899.t1.exon11;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 26399 28795 . - 0 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 25791 26285 . - . ID=g11899.t1.exon12;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 25791 26285 . - 0 ID=cds.g11899.t1;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 23994 25655 . - . ID=g11899.t1.exon13;Parent=g11899.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 23994 25655 . - 0 ID=cds.g11899.t1;Parent=g11899.t1 #PROT g11899.t1 g11899 MAQAAIPGYTVNGFAIKANTLGGLLDLQVASHGERDFIRICRLKDGAGRSSVGGDDIGREGSDSAGKCTDLTISVAQFARSTARMCMTLRGLGIHKGSVVAVLSRNSYAYAELAFALASIGAVTAPVNTNVSADNLHHIASTSRATFCAASADRVTDARELRRRMPQMGLLLLDDPPQLSHRTASWDDEQNSAGNDRQNGNVDGETDLTPHVGSGLWTPDQPLSVEDRSNSTNETPVTSKDLCFILHTSGTRSAPKLVPLTHENILYNRECALRAWADLYFTESGVAGQSPSVATSAPYATLGWMPFFHVIGLAFELTGNLYNGGCYWFAPFVTREARNPRRSSPPSARDFIAAVKHTRADILYCVPWMLEQVRDVISIGGCEAEDAIKALQSARFIMSGGVRLRDDLGDFFSQNGVTVVEGLGMTDTAGALLLGNPRVGDWRAVTPIPGLNAEFVGDDGSILRQEEWEKPLESVDLTPRELVLVDCPSVLSGYLDNPEATMSAFPSPGRFHTRDLFERVGPASFRYIGRRDDTFCHTSGEKTNPLPIEAHIERAAIVNRAALYGDQRPFNVAIVELAETTPQMSAVDIQLLVWEAVDSASALQPAHSRVSRDAVVIVRGRDNRVDGDTASARGKAHVFPLKPIPVTAKGSIARAAVASEFVAELDDIYRRASAQLEQIALPATALALHTDKVGPPKAAALDVGAIRAAIADTVRPGVAFADLDADETFSDMGLSSVRMVQCRRQIESRLGLDEGSLPNTLLFDHATPRDLLAHLCSLFPNPAVIGGGATSGQPSDLADTEAGGARSSREEDPCIVGMACRLPGAASPEQLWRMLCEGLDPITRVPKGRWDSVRLHDPDMDAPGRLYTDAGGFLDRVDAFDAAVFGIGASEAREMDPQHRILLEVAWEALEDAGMCGASLAKGRYGIGGVFVGVTNTDYHTRQLRAGRPLSDVGPYYGTGNAACALAGRVAYHMNLRGPALTVDTACSSSAVAIHLACAAIARGECDFAVAGGVNLILAPDASLHCSRAHMLSPSGRCRTFDSSADGYVRSEGCGMVVIRRRRDAERGSQDVACVVAGTAVNQDGRSNGLTAPYGPSQVACIQRALSASCLKPNDVAYVEAHGTGTQVGDEVEGRSLRTVFGKSHPPRDRPLVVGALKSHIGHAESAAGVAGVIKTAMCLEWQMVPPNLHYEQPSDGVRLDAIPALIPSRVARELVAPAGRSVLTAGVCAYGATGTNAHIVLTRESRDDVVASDAAVSSSAGERPAHVIALSAHTRGSLIGLASRLVPFFRGGGETKRRPRSLADECHTINCGRRHFPIHRLGVCAADRESMAQRIDEAVAQLTADTNTESHSDAHEAHNKKTVFLFAGQGTQRAGMGRELYTSERAFKQAYDNCDRTIRRLAGFSVVSLLYGDGEDAKAPSAGSALHAHVTLFCLQHALVAMWDSWGIRPTHVIGHSFGEYAAACAAGVFTLEDALFLVVRRGELMDSIDATDGRMTAVFAAEEDVTRCLHSCYDGVSVAAVNGPKCTVLSGPSAVIARWLEDNAAPQGWTYRDLSSMALAFHSAAVDPILDELQSAVSKVTALPPRIPIACTLSGKLSVAAADVTDHVPPITHPLYWRRHARERVRFADGIRSILQSGAGHVGASEGVFIELGSDSTLLGLTKRCINAPLRASHFAFLPSLGTSGTCGADTAALTSLAALYQRGYDVDWDSFDSSRNRRIVRGVPTYSFALTRFWYDSNDDINAPAGAASRDSCTVDFSLTNKHAAPDAPDVVTTRPYNTGDHVVLGRAVVPAAGHVVMAVAALSRSSVFTCAEDEGKGSLCFVRYTMAPNVGLENVLFSRPLEATLDASSPSGCHTARIHFSKVSDSVWSIMSLGVGGRLTADKSVHMEGRVRPTSSSVASGLANLIVECAKSEADSALSESRPCHGDEFYKYAASTGLSLAQSFTLLRDAVRFNCGSISGKTHRYSRGCICSVSLDVHTMGNDVNRFMRLLTPGFVDSVFQGAFFTFIGQEYESLYLPVAAEAVYVFRAGDVPHKSTVTCFILRHRSDGTDIVVDVVATVDGLPLFAAHSLRFRRVAREIFMSYFEAGGSDSDRSHTMLIHTPELSAVSPRLHAIRWLATPMTSPLPGGRTGLTRWAVVSRDGTVPPELPLGNLSRDDETCAFVCGSADAQLSHALDSCISNGVVSVLCVIYDAGESLLPNVQALVEVFRMLALRGDRARVLCACLSAGGGSELIGPVAYAAFLRCAAMELPSLRWSVVACDTASIRQAVADEMHYLVSVPAHEIDPSGEVRYVDGIRYTPCLQYIASNAPSETSRHIRSDLSYIVTGGFGAVGLTVLEWLVDRGCRWVALVGRTGASSRESRAALASCRLRGAAVLELTADVASAGFATTLSAAMTSSAFPPCDGVFHLAGVLRDASVLTATAEVVRDVLSPKLNGAVNTALAVLEEAGGGGTAGNTPFFVFFSSVASLLGAPGQSVYAAANGALDGYAEALRSRGVPALSLNWGPLAVGGGMYADAAGASSADAFSRLVASFPVLSAQDARTLLDSAVHSLSGHNAPSRAGAFAVDWRAYAAHLRRLHRCVPLMLAEVHTVDQAPDDATTTRFGRAVSVADVGATVVDVIRSVLGLAPDVPVNESRALTAYGMDSLGALEIRNELSRRTLLTLPGALLFDCPTARDLTLRLHADLLATTAKAKAVGGAASVARANASVADQAEETKSASASAGVGGKAKSPPVSAAAHSADGDEEGVVIAGMACRFPGGIATPDAFWSALCNKKDCVATIPTDRFDAASLVSRGLLACNAGGFLGDVRKFDAEFFGIPAAEADSMDPQQRLLLEVAWEAIGDAGIAPSSIAGSRTGVFVGLSSQDYAGLQMKSGVDVTATYASGYAASVASGRLAYCLNLKGPTLTVDTACSSSLVAVHLACEAIRCGECDTAIAGGVNLILSHELSVAFSKSKMLSPSGRCRTFDASADGYVRAEGCGIVFLRRASSSSSTSVGGGRTICRVLGSALTHDGRSNGLTAPNGPAQASCIRGALARAGVAPSHVGFVEAHGTGTQLGDAVELGALADVFGAVHRETPLLLGSVKTNIGHAEAAAGIAALIKGALCVQRGFVPPAAHYTQPNPHVDLSAVPAAVNTAGVEWIARADDRIAGISSFGFSGTNCHVILAGASQYVPTDVSIGTAGADNVYVVSAANAESLEPQLARHLDYLAAIAEHSDGESAYARACSLSVLGRDHLPHRVSVVASSAAAARTGLMGIPRDMLSLSLGHVGVHQWSGGATCMGHVGAGRPTAAIVFGDCTSDVTLMTPLDIIASECPSLDANSIRASTGAMQTATLIAAYRELYALAPRMDEDDSWDAWHVASIGVYGALAVLCVCGAITMERALAAAACMHETHASAAHATMAETHTVKQAQMRSVARLWAAPDAPLARSFVASSGRLYSRDAIIARSLEELLCDTSEAHVPIRVGLSIVIGEGAHPHVAAGVVHYYHPSRGDRHAALRAVLFAAGVDVNPSARSLALHKWAMQSLTPLPTYAFQGTPHWFDSLNTSTAPSAAVSLVSHKPLSSLHEDEQAAISDAQHRISLTSVTAIVASAVRRLLGLPPTREMDPNRRLMELGVDSLVAVDLREAVCAALGVTLAPAAVYEHPTIALLSLAALQAVDDRAHVHTTQLTHASTIRAQRAVTHDEANRHAPFPLTPIQRAYWVGSSDAMPLGGVSCHIYMEFEIGDGTIPGAGCAENALDKLETAWAQLVRRHDMLRVVVSPDGMQRVLCADALLSHVQFRRRTIDGPLRSRDWASDEWRVSMAHRMYDPAVWPPFDIRATASSEGGHVRLHAGFSMIAVDLWSLAILFSEWKQLAEDSTRIDRLTPPTQVSFRDYVVCTARDGQAPVSLAVPKPIPPPPSLPLLRPIDHEMNSNLRFSHVDHEIPAAVWSQVASLAAANGVTKAMTLFAVYCDLLARWSENKEFALTVSVFNRPDSAHRDIRRIVGDFTTAVLVDLDLSGENTDALSTPAVSTQSPQSPQLVQSARTQPIPAPFRTVAHTVQQAFVTASNAAMDGQQRPRQTAPATGDGVGIELHPYVFTAFFAPQSMEYDMPDSWIAPLVYRSSETPQVTCLVFVCISLHYHARISRKEASVVIMIRATTGVFGAISAYCGVYCRPLLIWRHFNILRQVLLDCQVHESRSGGLVVSWDYAIDLFPAGLVADMFSSFVGCIHRLAMHDTWSTWLDVLPASQAASIARVNATAYAVDPMEPRKAPVAPPFLQPDSAGNVSGSQPTDPISENVPLILQPRSRTLLHDPFVEKALETSGALALVCGTTGRRMSYAQLLRAALDCADSIQACLIADGIDTASGGSVSGHHVGEAKQPVELVAVLMWKGWEQVVAVIAILLSGRAYVPIDPTTPPARIEKIVNACLSHTASRLTVLTQARVASEQPAALACFGRVVVVGAVGASSSFTQSSASEDSIDIRRRLVSLEREMMSHRLADDDRAYVIFTSGSTGEPKGVAVSHRSALNTLLDVNATHGVTARDCALALSELTFDLSVYDIFGVLAAGGSIVLPPSTSKRNPEVWAQLCSSESVTLWNSVPAYLDMLVEYISGVAVCHAAGRVDARAILPPLRVIMMSGDFVPTSLITKARALFEKEWGGQAMLPRIVTMGGATEAAVWSVFNILGEVSDGTPLPYGLPMARQACVVVDELLRPTPQHVRGELLIGGAGVALEYVGDPQKTSERFLCGIPGSPGRWYRTGDVCSWNGDGLLEIHGRKDHQVKIGGFRIETGEVEIALSAHPGVQRSVVKALRPNGSSTGALALTAFCIPRDMSSPPSPSDIRAHVRGLLPQHMVPSVVHTLDAFPLSANGKVDHAALERLVARTAPVRVDDARDAATASVASAGGIDTFSASILRVVYDTLGLAYDESEAAGLLCRSLFEVGGDSVTAVRIASRLSGLLGTRVPLRLVMASDSLGHMVSDLKGVAASAALIGASALPSAGTPTNPEASQSPLPLPSHALQPLPLGTYALTPGQRAYWDAEARGDYGARGSMPFSVRIRDASVDTLALQRALGRLVSRHEALRTVFPPQSANGCEPHAIALPTTAYQPRLRVVKCGKGGWPGALAEAIDKEIGAPLEMYPVPPLRVTLFRGYAEGAVLVFNVHHIICDGWSVHHTIHPELARFYAEESGCVHNAVDAVASGAMPTPFSVFASAQHALLGDTAAMQRLWSFWRDELSDGHIPRVCFGAPADAEASSDADSPIVDLVVSTDCEERARIRVLSAAVHATHGSFLPVLLLSYFVTLCRMRVGDTSRDLAVGVVASTERSKPENHGIVGYLTNVVCVRSPLPSLVARATLDTRGGSRVPVIAAVEEMAARWARCVEHADAPFESLVSSLSRALIGEDQEGAALPRPVVQASFGFIDMSNSSEVADVCVLGRPEHRGSDPCFDIALTVCDRGAAVGMEFRWQAEASAVSVSTLRRVAEECETVLRELVDGFEFTA* # PASA_UPDATE: g11896.t1, single gene model update, valid-1, status:[pasa:asmbl_4231,status:3], valid-1 NODE_23_length_61570_cov_40.7854 . gene 8130 9225 . + . ID=g11896;Name=g11896.t1 NODE_23_length_61570_cov_40.7854 . mRNA 8130 9225 . + . ID=g11896.t1;Parent=g11896;Name=g11896.t1 NODE_23_length_61570_cov_40.7854 . five_prime_UTR 8130 8263 . + . ID=g11896.t1.utr5p1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . exon 8130 8305 . + . ID=g11896.t1.exon1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . CDS 8264 8305 . + 0 ID=cds.g11896.t1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . exon 8466 8569 . + . ID=g11896.t1.exon2;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . CDS 8466 8569 . + 0 ID=cds.g11896.t1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . exon 8680 8756 . + . ID=g11896.t1.exon3;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . CDS 8680 8756 . + 1 ID=cds.g11896.t1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . exon 8990 9225 . + . ID=g11896.t1.exon4;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . CDS 8990 9123 . + 2 ID=cds.g11896.t1;Parent=g11896.t1 NODE_23_length_61570_cov_40.7854 . three_prime_UTR 9124 9225 . + . ID=g11896.t1.utr3p1;Parent=g11896.t1 #PROT g11896.t1 g11896 MAATPVQAKKKLEIAPAARDTDPITCATFVLHDEDHTLGNALRYMIMKNPDVEFCGYSIPHPSETKIHLRIQTKGKPASEILRIALDDLEKMCEHIGKTFDHSFNEFSANSSSAMDTN* # PASA_UPDATE: g11894.t1, single gene model update, valid-1, status:[pasa:asmbl_4230,status:12], valid-1 NODE_23_length_61570_cov_40.7854 . gene 112 3084 . + . ID=g11894;Name=g11894.t1 NODE_23_length_61570_cov_40.7854 . mRNA 112 3084 . + . ID=g11894.t1;Parent=g11894;Name=g11894.t1 NODE_23_length_61570_cov_40.7854 . five_prime_UTR 112 112 . + . ID=g11894.t1.utr5p1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 112 281 . + . ID=g11894.t1.exon1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 113 281 . + 0 ID=cds.g11894.t1;Parent=g11894.t1;5_prime_partial=true NODE_23_length_61570_cov_40.7854 . exon 535 641 . + . ID=g11894.t1.exon2;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 535 641 . + 2 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 839 1018 . + . ID=g11894.t1.exon3;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 839 1018 . + 0 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 1173 1543 . + . ID=g11894.t1.exon4;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 1173 1543 . + 0 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 1737 2130 . + . ID=g11894.t1.exon5;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 1737 2130 . + 1 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 2303 2372 . + . ID=g11894.t1.exon6;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 2303 2372 . + 0 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 2509 2601 . + . ID=g11894.t1.exon7;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 2509 2601 . + 2 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . exon 2736 3084 . + . ID=g11894.t1.exon8;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . CDS 2736 2920 . + 2 ID=cds.g11894.t1;Parent=g11894.t1 NODE_23_length_61570_cov_40.7854 . three_prime_UTR 2921 3084 . + . ID=g11894.t1.utr3p1;Parent=g11894.t1 #PROT g11894.t1 g11894 SHKFVALKVVKSASHYRDAALDEIKLLRAIHENEGPGKDCVVQMLDNFEVHGPHGQHVCMVFEVLGQNLLKLMTKYRHRGVPMASVKDISRQLLLGLGYLHQRCMIIHTDIKLENVLLRIDDAAISSLALLPENVSIPIPDFKDSNQRAVTKPQQADGASSAKASKNKKKRMKAKLKKAGGAAASGTKNPADGGGESGDSDPDVSEQSTCSSVVQPSSQAQTQTQTHAPGHPEAPAQTPAQTHAHSQAPSTLHTTVHDAADAAAAQREHPSATTDGPTPMDITSDASGHTNASRSTSDADMKGGETDAAVTTHITHATHLTHTANTHQPSAVSNAAASGALTEHVTEADGVDAGTSVCPVKIADLGNACWIHHHFTDDVQTRQYRCPEVILGAGYGTSADIWSAACMIFELATGDYLFEPFSGRDYSRDEDHIALIMELLGKIPKHLALSGKYSKEIFNKKGELRHIRRLRPWALQDVLREKYSFANRDAEEFASFLLPMLDLNPDKRVTAEECLSHPWLYS* # PASA_UPDATE: g11895.t1, single gene model update, valid-1, status:[pasa:asmbl_4228,status:3], valid-1 NODE_23_length_61570_cov_40.7854 . gene 3403 7789 . - . ID=g11895;Name=g11895.t1 NODE_23_length_61570_cov_40.7854 . mRNA 3403 7789 . - . ID=g11895.t1;Parent=g11895;Name=g11895.t1 NODE_23_length_61570_cov_40.7854 . five_prime_UTR 7661 7789 . - . ID=g11895.t1.utr5p1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 6872 7789 . - . ID=g11895.t1.exon1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 6872 7660 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 6436 6612 . - . ID=g11895.t1.exon2;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 6436 6612 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 5999 6127 . - . ID=g11895.t1.exon3;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 5999 6127 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 5789 5860 . - . ID=g11895.t1.exon4;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 5789 5860 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 5362 5515 . - . ID=g11895.t1.exon5;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 5362 5515 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 4908 5113 . - . ID=g11895.t1.exon6;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 4908 5113 . - 2 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 4599 4721 . - . ID=g11895.t1.exon7;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 4599 4721 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 4269 4388 . - . ID=g11895.t1.exon8;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 4269 4388 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 3981 4112 . - . ID=g11895.t1.exon9;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 3981 4112 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . exon 3403 3856 . - . ID=g11895.t1.exon10;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . CDS 3464 3856 . - 0 ID=cds.g11895.t1;Parent=g11895.t1 NODE_23_length_61570_cov_40.7854 . three_prime_UTR 3403 3463 . - . ID=g11895.t1.utr3p1;Parent=g11895.t1 #PROT g11895.t1 g11895 MAERMGGGGGARLPRVAKVKNKEPAPIQITAEQILRVAKSLQLEAAPKAPKQKVADPEELEDYKLKKRKHYEDSIRRNKHAMGVWMKYATWEESIKEFERARSVFERALVVDHRNIALWLRYAEMEMRNKNVNRARNIWDRAVAILPRVDAFWYKYSYMEEMLGNVAGARLVFERWMEWQPEEPAWQAYIKMELRYSEVGRARDIYERMIVVHPDIKHWIRFAKFEEQHNQPTKARAIYERAIGFFEEFQPDERLFISFAAFEESAREFERARVIFKYALDLLPKDKAQELFKAYTQFEKKHGDRAGIEDVVVGKRRLQYEEEVAANPKNYDAWFDYIRLEESTGDFAKTRDIYERSISNVPPAEEKRLWRRYIYLWIFYALFEELQAKDPERTRQVFKACIQLIPHKIFTFGKIWLLYAQFEIREKNLKAARLALGNALGMCPKDNIFKGYIELELQLREFDRCRKLYEKYLEFNPANCATWTKFAELETVLGDVERARALYELAIGQPLLDMPEVLWKAYIDFESELEEWDRTRDLYERLLKRTQHVKVWISFAQFEANIEGADGRVERARAIFERADKLLSQAQLKEERVMLLESWREFEANHGSSADLSAVQKKLPQKVKKRRQIQGQDGTEAGWEEYFDYIFPDEQSAAPGLKLLQMAHLWKMKQHNDDDDGGDDGDDPDTGDNGGNDGGDSASDDDAGQGEGRKSAPHQGDAAADGSSTTSSDSSSSSGSDDESEDAQIAPSAAAADHGSGSGAAADE* # ORIGINAL: g11900.t1 original gene structure, not modified by PASA NODE_23_length_61570_cov_40.7854 AUGUSTUS gene 42940 57722 . - . ID=g11900;Name=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS mRNA 42940 57722 . - . ID=g11900.t1;Parent=g11900;Name=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 56583 57722 . - . ID=g11900.t1.exon1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 56583 57722 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 53990 56394 . - . ID=g11900.t1.exon2;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 53990 56394 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 51593 53702 . - . ID=g11900.t1.exon3;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 51593 53702 . - 1 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 48449 51331 . - . ID=g11900.t1.exon4;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 48449 51331 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 47023 48228 . - . ID=g11900.t1.exon5;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 47023 48228 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 45404 46630 . - . ID=g11900.t1.exon6;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 45404 46630 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 44748 45242 . - . ID=g11900.t1.exon7;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 44748 45242 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 44526 44603 . - . ID=g11900.t1.exon8;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 44526 44603 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 43756 44364 . - . ID=g11900.t1.exon9;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 43756 44364 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 43458 43601 . - . ID=g11900.t1.exon10;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 43458 43601 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 43142 43243 . - . ID=g11900.t1.exon11;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 43142 43243 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 42940 42981 . - . ID=g11900.t1.exon12;Parent=g11900.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 42940 42981 . - 0 ID=cds.g11900.t1;Parent=g11900.t1 #PROT g11900.t1 g11900 METDNFLGLTAGAGVNEILGGLLDEEPLERLFALRRLVASLSNRLTVSFVNVNVRTALLRRVLDIIVGDERRENRLTALYLLGKLSKQLADARLRRMAYRAITERVALVLNFQRCARSYSDFVDEEEKAHLFCALGEYVEHEAQGLAERQSLTFYFCIEEIDHGARSPFVLYAILKVLNERITKDRRNKSLVPSMFGERVRPLKTNAYMPLRSEAVRFNIMWDHRNALEGMGPELGPGGLSEVFYSGFRQWRALLPPNAPVWIGYDTECKRLQKRQRVEERLNQVRLNWMCRLLEIPGTVARLKGNRQDQGYFAGATIRMPHTAEIVAELPDVRHDAKVTLTRLIPQIPGVPLDATTIPPVLREPGQSESEEVDEPALPPGFGKDPLEAVEYQCTGLPLGRGFTLNPAKGRRPDAIPEGTTLAAAKANRYLPSTSTSALVPPGCSPAFPNYYGRNEAILVTKPIPLGATAHSRLHARKAPEGCTVVPHPVVFPEGTEALKESTHKTDFPASAPVLIEIYTPGKLRRIYTKVVHPDKHLAALNLDQDGQSRSLTVGCTISLKIRRRVGGKSELEWKAVNLLVESIEDESRGERQRKGANPPNGVMLQATASATDENTASPEELTSVVAVGYSADGTPFFAPMVNIPPIPDGYTDDGTPYYCRPSALKTKPAGFTVEAEPFYSLTSVDQRSPAGYTNDGEPFFLMPHCLTCSPCGYTPQGIPFFTFAKLRRFVIQNTRLDLDRLVPLQGEEDPVLVLQDAERRNIMSKKKSPGGLPVVVTQGARVVGGPSTHQRRSLAQSIVEGDEKDGVDGQQVDGEDLPVPSRSRRPSMFHGGRTSVGDVIIEKLIENDPSHVTGLLNADGSNAVIPKVPLRRVGKSGKGETPPISSEEDWKNPFHAIKIGRKYSTAGAMQVVYDEEDDENAGLPAGVWRRATMDQSEDFGMDEFVFDEYTAVQTRSDADGFKYSVQFESQKVAFKSTFETSSAQLVIVHEAKSTDHSACAATKEPSPKKCFLTAYPPEIFHLFEFEVELKGTGQRTVAVEFHPRQARLPLQTFQGRVELLDETGSRLSMCTLEAQRMPVMKVPAKRIDAGWVAPGNQRKIYIPVANISTEAYRASISFGTAVENRSGAQMAPASAPAYFADGGAPLSVPDTPFRIITKEITLQPNSTGTFHVSFEPTVDGRHDTKLVIRGPSFEEAEVLVIGVAGQELHVEVAGGGSVGGPRKSRKRRSLAQISTEGESSTTAAPSALGALGEGSNILDEMLDYDELYAGASDDNDRSCMLDFGIMNEQRRMRSFVLTNSSERPVQIGLMAVDKSGGWEFPKTVMLPRNGTTRIDVVFDATKSSPGKVMQQLEIVRSTTQNSLIFARAHVGAPVQFALEEYVFFQPAAVGSGSDSIITAVLANHSDYEVQFVVSPFADRGAEGGAEGVSSFTTSVSRDPAHPTRLPANSLMSVEFKFRPAFVGPSVAELTIDLVTPIRQRYTGRGDGLRCFLVGLGIDPSGVPASSEDQAGQGLARYGGIAFLSEWIDSKQGSIPERYERFRLEFADDLRRRANAGGAVNPTPTTLSVLPRKLFTPVVEQSPTLGADGMKILPTLEEPSASEDDEMRTVEIVNTGDEESEAYIVCSPGFEVQPKTVRVPPSGIARVSIRASARGLLIPSGKDAVFWERNGFVAAFSEAGRNVTTMQVVGQRSALAVFPHEALEFGTVLTSQRNEQTVLLCNNSEDELDWTAELSPSTALVFRVSRTSGRLGPMGTAQVAIAFEPDVGGEFVAHVLFRNASLSASKGKDAKPLCLQVRGTCSGYVEIEGIPDAMDFGRAVLGQRVAQSLDIANKGTAAAEIVVQVPRPFFLEDEETAFVLESGTSKSLHIAYEPVHVLSDHQSILFLINNDVQSVSTTGVGEEIRMVSHLGEAVDFGAQEWESERWRDIYFVNEGSVEVSVLGCVSSQPERFMLFYVKDFEDSDIVGALGAPSSKFGKSTDASHILTELDVDDSLLEVLDVVADPATFDGVGAFGLEGGRPCVPPKMALHVKLGVRIPARQDLLADLTLIYRPKQPEAYRVDIARLWKLPLRVLASGYKKLEFHPTLHDYGIVPVTRGLERREGGASGSSASADDEHGGGYGVTRAQEKPRNVLSLVVVNNTAEAQLLRLESISASFSIIGDRWSLETGKSVVLPIQFFPRKASVQYVGQARFIDNHGPSCVELRGIGANADLELLSAASMDFGVIRLAKSATLNIEIRNVGLLDAEFTLSLEQAGTCFWLQLESGTLDLSTSGVIGSGDQIAIPVVFKPTILPAGSDNAFNGRALLGWQDVPRAPVQTHAIPLLAKVGVPHFAASCHGKPIADFDIAYLNIEKAIEITIKNGGSASCAWRCASESSALTVAPSEGVLEPGDTRSMRALFFPRMIEPLSSRLLFETDAGLIVLPIVSDVGAPYLHIDLAALPIDYGVVGIGTEKSRTITLANTSPTLPVVFAVSIAEERISGILTGGQHVFECRYTDNGVNGSIAPGSSGQVTFIARPEDYNAECTASFVILTKIGERYTGTLRCVGGLAKVIVEAGARAGLNNQPDFHSHLICDLGLVLGSTPVVVPDAFRLVNKGNLACAVDISYAEMSLPQDAQYPHRPPKAAVSLIKRQTLASLMSGLQVEHDSGTGGSVGGSLATLIPEENTGEAPRERAFIVSPTSMVVSPGESANLDISFEGFVGGTFKQGVRVTGTGLNEVIWLTATVGVPRIVANAARLYYGQVIADKEFRRSLTLSNTGSFPAQYSLSILSRAELKGQTSDPDEEMQFWVEGPTTGIIQQSAEAVIDIVFMCKHDTVAEKVLVVEWSPGPSILVVLRGVAGLGNLQTIFDNPADVKYGGLDFGVVALGSVATHKLILDNPGFEAIDMTISCQAPCVTISSSSTPVTLLPGSSLTFDVSFAPSDRGMTGAVICVDTSVGSRKIPLRGEGGLVSMRILEASLAFEPMPLKGTQYRRVTVENTGDIACTFCPEIRPAVHARAVSSYIDTGLSEMVLEAKSRATVNVKVTPVEVGDIAGRLVIVVKGFETLLPAPVEPTLDFVVPVFSSLLEMSAYDDVDFGRVRVGQEVRLTRTIRNHGEHPTLFKTELVTKTTDAEGNEIDTTVLYPDVDAVWIMSPENGTIPPKEVITITVVFRAAIDNESFHYAAQLVFTSMSGGERLTYRVSASVGHPELRLSVANLNFTGGAVERGGEGFVRRFSIYNTGTCDTDFSLRTLLTPTNFSRGNTFLIEASDPSGALSGKLLPGEERVVTIRFNPESNDKHEALIVIESSAGGVEIPVVGEGVVLKIDEASVPRSIDLGTVFVGESVSMAFDVINDCYDPVHLRLSVGNEPFSFEDSGLRLEQSEYQIAPNDAEVTGDARARTTVRFTLLAGVELLTRIAPANAGGFAAGRIIAGEPSERILFVDFGPKIISIPVRVAVQVKRLVVEPDSLDFGEFVIGVSHKRTFTLRNPSSIPIRYRLTTDAPELWIDGGSGSIDPGETVEASAGFKISTDSHMSDAPGPIVLREFDGAVEDLIIRVRGVAERSTFAIETEDIDFGEAFTAAPVARELLLPNGTLDDVHYSIVLETAFPEESLRWFSVVKEDRSGIIPKGESATVRLFFQPGQDAECVCTCVMTLYTKSNSFSINLRAMALLPSLQVSPLRLDFGSIAIGRPLTRPLVLRNTGSRPVAVALASRPPSGFSLALPVEEIAPSEEKIVQIEFTAVDDAVAHTGELRFMMRRSPSSVDATVDEMNRPLAACIVSGMGAALPVSLDPGVLDLGECPRNYIGAGFFIAENAGSHPMGVTVLDGRFAKAADDGQVDGEMSWRIFPTTTTVGPGERRTFEVVVQPRGFGRFEQPVIFHIETPEHASVHLPSRIVVTAPVDLDQPSRLLLSNRAALQHIRSLLGESIVPEKAESSESEYESIYEDDEDGSSMDDADNTADDGLLGEGITNARRKSRAKSLTPDVDDGAEEDPDAVGSLRQTPLEDDEGGDDAAPLPTSERRRSSVSQRRASVGGKAAIDGDAVKRRKSIKKPPPPQVPSLEAIKAYNRNDPSVVTKSIELDEFAPDGDGIWLILQQVVRVDAAPELLRGRAVPAIEPPLEYKDLHDVLVRPPPIPVAELEGKKPHFIAKKVLPLRATDWLADQ* # ORIGINAL: g11901.t1 original gene structure, not modified by PASA NODE_23_length_61570_cov_40.7854 AUGUSTUS gene 58161 61434 . - . ID=g11901;Name=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS mRNA 58161 61434 . - . ID=g11901.t1;Parent=g11901;Name=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 60826 61434 . - . ID=g11901.t1.exon1;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 60826 61434 . - 1 ID=cds.g11901.t1;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 59136 60709 . - . ID=g11901.t1.exon2;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 59136 60709 . - 1 ID=cds.g11901.t1;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 58870 59010 . - . ID=g11901.t1.exon3;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 58870 59010 . - 2 ID=cds.g11901.t1;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 58546 58718 . - . ID=g11901.t1.exon4;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 58546 58718 . - 2 ID=cds.g11901.t1;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 58161 58445 . - . ID=g11901.t1.exon5;Parent=g11901.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 58161 58445 . - 0 ID=cds.g11901.t1;Parent=g11901.t1 #PROT g11901.t1 g11901 STHERKSRTNLVSKQSKFYLKHNTLSEDVPIVIIMKAMGVESDQEMVQMVGSDPSYSDVFAPSLQECASLGIFTQAQALDYIGNRIRMSRRMWGVRKSKSEEARELLASVILAHVPVRDFNFRAKCVYTALMVRRVIHAMHDTIAIDDKDYYGNKRLELAGQLLALLFEDLFKKFNAEIKRVADTTIPKLRAAQFDVVKQMQRDDITNGLVHAISTGNWSVKRFKMDRAGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDDEEGPIMRLAVNLGVEDIMLLSGDELNDAGTYLVFLNGNLLGVARNPTALVRAFRRMRRAGRISAFVSICPNDRQRCVYIASDGGRVCRPYIVVERRRPMLTTVHIEQLTRGFRSFDDFLREGLVEYLDVNEENGCDIALYEADICAETTHLEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGTIGYNQLNRFDTLLYLMVYPQRPLCKTRTIDIIEFDNLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCQVLRKYATTIRKYQNQSYDRIMGPMVDEHGRPIAKHAILDADGICGVGERISPGDVFINKESPTNTQNPVTSADASAAKVGFKPSPMVYKGPASAYVDKVLITSNSEEHFLIKVLVRSTRRPEVGDKFSSRHGQKGVCGLIANQEDMPFTDLGICPDIVMNPHGFPSRMTVGKMIELLAGKAGAIEGRQHYGTAFSGDKVEDLCKVLIGAGFSYGGKDYVTSGITGEPLQTYIFFGPVYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDQFEVHVCRQCGLLGYSGWCHYCRSSAGISQLRIPYACKLLFQELQSMNVVPRLSLENY* # ORIGINAL: g11897.t1 original gene structure, not modified by PASA NODE_23_length_61570_cov_40.7854 AUGUSTUS gene 9917 16908 . + . ID=g11897;Name=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS mRNA 9917 16908 . + . ID=g11897.t1;Parent=g11897;Name=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 9917 10015 . + . ID=g11897.t1.exon1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 9917 10015 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 10199 10432 . + . ID=g11897.t1.exon2;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 10199 10432 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 10565 11701 . + . ID=g11897.t1.exon3;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 10565 11701 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 11897 13949 . + . ID=g11897.t1.exon4;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 11897 13949 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 14228 15518 . + . ID=g11897.t1.exon5;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 14228 15518 . + 2 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 15638 15719 . + . ID=g11897.t1.exon6;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 15638 15719 . + 1 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 15865 16309 . + . ID=g11897.t1.exon7;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 15865 16309 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 16471 16676 . + . ID=g11897.t1.exon8;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 16471 16676 . + 2 ID=cds.g11897.t1;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS exon 16780 16908 . + . ID=g11897.t1.exon9;Parent=g11897.t1 NODE_23_length_61570_cov_40.7854 AUGUSTUS CDS 16780 16908 . + 0 ID=cds.g11897.t1;Parent=g11897.t1 #PROT g11897.t1 g11897 MEGTVRTTDAIALLADAPSTNIDALLASSKHVRYLSIACSRAFIAIGASTGAVHVFPADKGGHRRRFISTDLGGISKVRFSPDGTRVCALTAQGYVVAWDLKLGVGAQKEQLLVCLSARDLWPNTPEPSSLVTCIEWDAFSKLVLCGDSVGRVFAIGSQLLRGAAKQGVPTTLSPSEANPSRADVTLLYAAESAIVQIAPCGHTIAVSSMQRCVVVDVSTRTSAQVGKAKRKAPGAYGVCWEAHANSDAAQRRNSAAVQGLDALCLYTGRQGYRIWRASAEGDVQATVIFEDDLTGPHVTGLARVGTDGALVVEKRLTTEGDVTADEEVPQNFAQLGALDGGLLLAWGAHRGWLCFLNPAVAEATKWQPFDGESVVDVCTAGERVHALVEAVGTSGRPVYRLRSFSAVSPRRAMSSLADGAHWRAVIDIALPYVDAADVEAVDASSFVAAVDAFEAQGLLDSSFAARLGPARDQLRSTLHAAPLESSAVMTEPADTHLVDGIVNASEVSTTASEAESDDRVHVIDTAGRPDDVPSVLSFSRADSPAMEAATADILEFDVTETPNVTKHADVPASMIPEDSHTAHVTTETTDGNDHRLDALVAGEVDESRDGPKRTLHAPESDHTSTPATVPALSLVETPAAVTEPATPAVTEPASLVEVTVPVATPAAVTAPVATTAAVTEPATPAAVTKPATPAAVTEPATPAEVTEPATPAAMTAPVATPAAGTEPTSPAAVTAPVATPAAVTEPATLATVTEPGTSAAVTAPVAIPAAVTEPATSVEVTAQTIPAAVTVPVATSAAVTAPVATPAAVTAPVATPAAVTALVATPAAVKAPVAAPAVVTRPAIPAASIATPAAVTVPVATSAAVTSPVATPAAVKAPVATPAALTVATPAAVTAPVATPAAVTALVATPAAVKAPVATPAALTVATPAAVTAPVATPAAVTARVATPAAVTAPAATPAAMTAPAATTAAVTAPVATAAVTASLATPASVTASVVTLASVTKPATPAEVTAPATTPAATTAPAVTPTAVTTAIATQALSPPSVWTEVSPSAQSGSDYGVSGPPVLSAPTEVAAIPRSVTLNPGIVAASLLRTDVDKLPTAVDVPPFVAHASLLGAVDSSSHAHLAVPQATALASLADPPISRDDAKVTKTRKVKKSDDPKKKGTKKKRPARVADILPAPESPSAAPPQQSQPTLPPTGYNPIPLPDAPSRAQNTDIAPSVASKGRADNKGSASVTAEPPRRDSSAPRPAVLNQHTAQSALHASAQGDMQGDMSATKRDSPGVSTRTDTPAHASTPPPAVKTGAVVAAPPSPVMPTVVATIAPQRTSALPKQRSAETPPLASSPYSESPPRFLPSLSGIFARSSPQQDAGTPPAHAASPPGPRVHTPPSVAATQGSASMPPRSASQKSLMQSSSKGDMRTSTSTTNGYHSPQPSDASSGMRSASGVSLTADVSGHTSAVVSSLEKKSAASHRAVVQSRLTCGQPADMYRLLREWLVSTETECVSLRNDGVPFGALVGRKDTRMSCAVALACINAAAALFADGADRTESASSNMHEDDWDDAALSLLARLGCLCDRVRCAWMAVEHKSAKVAAHIGSVEAADGIARAIRSAKESNSDPEALVRTLVDGYPRIPPPCAEHALAEDTLKMSYYRTLFSRPADGARPDARSFPFLVMRYIELAICSERPARGELFSSEDDDGRHPHPLRGSHHVPFVGDGVVCSVMHDRSGNWVLDAGLLWKVFVARGYWRGAVWAATRLGRPADALALIVALCAPELIDASLAAVMTPADWAVVVEACIHVDSAGNTPTTPTPTPLQAITRAYATYAGCEGVESLTAHLTTTPDGLPTAFYEALVAVRASEIKRADITEQLSHTLRRPSALFLADDAAMGRGDM* # ORIGINAL: g4119.t1 original gene structure, not modified by PASA NODE_697_length_18883_cov_41.1547 AUGUSTUS gene 4238 8254 . - . ID=g4119;Name=g4119.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS mRNA 4238 8254 . - . ID=g4119.t1;Parent=g4119;Name=g4119.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS exon 4238 8254 . - . ID=g4119.t1.exon1;Parent=g4119.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS CDS 4238 8254 . - 0 ID=cds.g4119.t1;Parent=g4119.t1 #PROT g4119.t1 g4119 MKESWQARDSRAQSVAPYSSTGGSSRHESSRKDANERDVKYDNNSKYDKYARDDKGRKDDRDAGGSDRYSRSTDKHEYNKEDKYERKYEQKYEQKYEQKYEKKYDDKYDAEREGRSSTGRRGDDIDARKRPSGRDKSVERDAPTRYSGVSDYVRDSAKRKSGGGRSPSPDRYRHEDSRDRNVGSASAKDSKRRRSPSPLPHSRSRKDASPSPPPTLNNVRDKGGRASEYGYGDKPQVYGRRDFSPTDKRIRSPPRDRERDRDRERVKERDRPVTTKEYASVTKEYSGRKKESPPPKGHSSSYGAPCGRVSARDQSPAGRQRSRSHSRSRSRSRERTTAHSKGRSPDPPIRGRSRSRSRTRGDVRKTRSRTPQSPSPSPSPQPPTSRRARTPSYSPPPSRDTNKRRRSPSLSVRGDASPPRSGSRYTATRSSPPAESGDRLGVSGRSDVSARPMIHPDRLAVFKSSPAGHPGPHRGHVAGGGAGSIPVGRHPIHMIQDPATNANVVPLAFNRLEQRDLGGGGGGESGAKPATLADLVHHGGASSGVGARDESDSDRMSGVTQRSSQLQHPTQRLSRGPRPPWAASRGGAGAGRGGYIPSAGSTPTGRGRGRGVPSYPHSADRHTDRYKALGADAPVWRHNKFDSTQEGVSSVSSRRVVLMGDEAKNEDVVGNDVLMRDADDGHNEHDEHAYHGDHGDNKDGGKEDDGRRDSLKRRRRREDTEDKSDRSDRSDRSGGHERMSKRIRADGGGQFADTHRVGYIAVKMEPIEGHVNDRASDDRHAHAAVAGTVVDSAVSAAAPILLIKAEAAASNAEETEAPDDRNDKDAEREKERERDDVEGTEGTQYDTADGKVQLLAGLKSVRQRFLRMNLQFTADERIASRPGPTAFVKESRQLDQAFANFAKRVVEVLSKVDVKSAELAEDKPYNLALWGLLVDLLGLAKECATLTTSSLRQMSADSQQLKDSLAKKMSIANRIVTLKERIEKLGAVEKTALEAAHPTIAELRVFLEQDLGLLSFELASLVFSQRVAASSDGASSTVDDPLMAAPTLAQVAMTSKLLAKMMLVAIPQQVVRGIETQVALLTSADENDDNNNNNSNSNNNNSSNAHGGDSGIGQDSHTSTTASSTRRTASIRSLLLEGARSAPVRAEFAHHCVLMGAVLATKAHDAIIRAPTDSSTAASLALATSSVIPDLNDYFLPSNPRVPNDHTVLSEAQKIISLLQPSTVLALYEGLSTCRRAVMSIDSFAASFPEDDAPPGALARPGQLNDKYVLYEPADPSQATLGEADADDVVISCTAVPVISGLGYDLLIPGRVLLVEAPQSATAHSSAVESALSTEATR* # PASA_UPDATE: g4122.t1, single gene model update, valid-1, status:[pasa:asmbl_8917,status:12], valid-1 NODE_697_length_18883_cov_41.1547 . gene 13312 18587 . + . ID=g4122;Name=g4122.t1 NODE_697_length_18883_cov_41.1547 . mRNA 13312 18587 . + . ID=g4122.t1;Parent=g4122;Name=g4122.t1 NODE_697_length_18883_cov_41.1547 . five_prime_UTR 13312 13379 . + . ID=g4122.t1.utr5p1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 13312 13421 . + . ID=g4122.t1.exon1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 13380 13421 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 13808 13852 . + . ID=g4122.t1.exon2;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 13808 13852 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 13967 14056 . + . ID=g4122.t1.exon3;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 13967 14056 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 14339 14430 . + . ID=g4122.t1.exon4;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 14339 14430 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 14811 14916 . + . ID=g4122.t1.exon5;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 14811 14916 . + 1 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 15095 15190 . + . ID=g4122.t1.exon6;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 15095 15190 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 15818 15933 . + . ID=g4122.t1.exon7;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 15818 15933 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 16443 16525 . + . ID=g4122.t1.exon8;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 16443 16525 . + 1 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 16904 17010 . + . ID=g4122.t1.exon9;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 16904 17010 . + 2 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 17420 17527 . + . ID=g4122.t1.exon10;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 17420 17527 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 17789 17813 . + . ID=g4122.t1.exon11;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 17789 17813 . + 0 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 17957 18176 . + . ID=g4122.t1.exon12;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 17957 18176 . + 2 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . exon 18352 18587 . + . ID=g4122.t1.exon13;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . CDS 18352 18475 . + 1 ID=cds.g4122.t1;Parent=g4122.t1 NODE_697_length_18883_cov_41.1547 . three_prime_UTR 18476 18587 . + . ID=g4122.t1.utr3p1;Parent=g4122.t1 #PROT g4122.t1 g4122 MSVMRAASMLRSAKTHKIAGIALRAYSTQGSGISFSLTPEQTEFQQLARKFTAEHIIPNAAKFDKSGEYPWDIMKKAHEVGLLNLHIPQAYGGIGMHCLDGCIVTEEIAYGCAGIQTAMESNALASMPLILAANEAQKKKYLGRLVEEPLVAAYGVTEPGAGSDVAGIKTTAVKKGDEWILNGSKMWITNGGHANWYFVLARTDAKASAGRGFTGFIVEGDTPGLTRGRKEWNMGQRASNTAGITFEDVRVKDENRLGDVGQGFKIAMGAFDHTRPAVAAGAVGLARRAHDEALQYAQGRKTMGVPIIEHQMVAQLIADMAIGVEASRLLVYRAAWEIDQGRRNTYYASAAKAMAADVANKCATDAVQVFGGNGYNSEYPVEKLMRDAKIFQIYEGTAQIQRVIISRELVNMGKLPV* # ORIGINAL: g4121.t1 original gene structure, not modified by PASA NODE_697_length_18883_cov_41.1547 AUGUSTUS gene 10676 13061 . + . ID=g4121;Name=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS mRNA 10676 13061 . + . ID=g4121.t1;Parent=g4121;Name=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS exon 10676 10713 . + . ID=g4121.t1.exon1;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS CDS 10676 10713 . + 0 ID=cds.g4121.t1;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS exon 11032 11146 . + . ID=g4121.t1.exon2;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS CDS 11032 11146 . + 1 ID=cds.g4121.t1;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS exon 11439 11946 . + . ID=g4121.t1.exon3;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS CDS 11439 11946 . + 0 ID=cds.g4121.t1;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS exon 12172 13061 . + . ID=g4121.t1.exon4;Parent=g4121.t1 NODE_697_length_18883_cov_41.1547 AUGUSTUS CDS 12172 13061 . + 2 ID=cds.g4121.t1;Parent=g4121.t1 #PROT g4121.t1 g4121 MAQSFYMKKPKTTYSPYKRTFARGRQEFDDIEAHMRAVSDIFNGMASFCGEKGKIMPKGSLKIHDSLRICKQELKEWLSHIETNSPAELMRPVIATTVSASISLLDTIAGHVSVIVKKQLEASHGQNEVDASIRRLESQETRLQQTKKELDAKIDALDSAAAKGAEVGGQSSAVAVETQLPLQFEIDNSIGAIGRDMEAFKEEMVLAAHPVLVRLFGEAAANDHVTAFEAAVCGVVFGELMASFRAKAECAYQRVCDACAISVASLSATPRVLCAIRDALIKESMVGYELLEAAVAHAHRCIELILTNATTDASLSAACGDGVANQNRNLADVDEETVNDIANTLQPCMILGIALVRKIAFSREVYVSLPTPAQLLSMYTDSSSASAATIAAEFAIDYGSTVKPLLVWPALVSSPDVTVPRLVYSKGLWIIPDSARGPVLSSVSGAATTGDATAAAAAPPAASADAGGGSGAGVHDGRQPMHGIEHEHTEVPSVHAHEGKEDAADGAGEETVVVNG* # PASA_UPDATE: g4120.t1, single gene model update, valid-1, status:[pasa:asmbl_8918,status:12],[pasa:asmbl_8919,status:12], valid-1 NODE_697_length_18883_cov_41.1547 . gene 8770 10270 . + . ID=g4120;Name=g4120.t1 NODE_697_length_18883_cov_41.1547 . mRNA 8770 10270 . + . ID=g4120.t1;Parent=g4120;Name=g4120.t1 NODE_697_length_18883_cov_41.1547 . five_prime_UTR 8770 8826 . + . ID=g4120.t1.utr5p1;Parent=g4120.t1 NODE_697_length_18883_cov_41.1547 . exon 8770 10270 . + . ID=g4120.t1.exon1;Parent=g4120.t1 NODE_697_length_18883_cov_41.1547 . CDS 8827 10209 . + 0 ID=cds.g4120.t1;Parent=g4120.t1 NODE_697_length_18883_cov_41.1547 . three_prime_UTR 10210 10270 . + . ID=g4120.t1.utr3p1;Parent=g4120.t1 #PROT g4120.t1 g4120 MPTTNSNVRYVGSINANKSNASFAKGGLVSFYLGIVLLAASASAVTPLVGVVEGFYWSAGDTVNGQSGQLSHAQRCQAVRIAAAAGAKVYLFAPHTGADSTVVPFTTASAASWRSLATLAHSVGLSFVYGLRPGWVDDNSKAAVVAKVSELKSVGVDLIALLFDDAAGANTTDQRAAQVSLVTTLSGGGPPSLWGLVPASYYGDPNIQASWLLPLAAALPVGASLILTGRSVTPDTVTLSDFPSLSRRIVFWDNWAAPDSSLRIPWSLGRATPLPQQLYSSSEYGYIAALTFPLERTVHQIARVGQLARAGAASTVVAGRTELATLSDASERWAAYLASSGFYVNATAIRTTQLSTVLSNLIATDSAWASLDTLVASYPLLKDVFVCNCSAGCANPLFCGASPSSPYQQSCACNATAISAYDCSVQEGTDADDGSGIVARPVHIVAQMAATLLVAVFLSA* # PASA_UPDATE: g4118.t1, single gene model update, valid-1, status:[pasa:asmbl_8916,status:12], valid-1 NODE_697_length_18883_cov_41.1547 . gene 180 3688 . + . ID=g4118;Name=g4118.t1 NODE_697_length_18883_cov_41.1547 . mRNA 180 3688 . + . ID=g4118.t1;Parent=g4118;Name=g4118.t1 NODE_697_length_18883_cov_41.1547 . five_prime_UTR 180 181 . + . ID=g4118.t1.utr5p1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 180 292 . + . ID=g4118.t1.exon1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 182 292 . + 0 ID=cds.g4118.t1;Parent=g4118.t1;5_prime_partial=true NODE_697_length_18883_cov_41.1547 . exon 473 548 . + . ID=g4118.t1.exon2;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 473 548 . + 0 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 705 828 . + . ID=g4118.t1.exon3;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 705 828 . + 2 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 1166 1331 . + . ID=g4118.t1.exon4;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 1166 1331 . + 1 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 1525 1623 . + . ID=g4118.t1.exon5;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 1525 1623 . + 0 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 1810 1935 . + . ID=g4118.t1.exon6;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 1810 1935 . + 0 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 2261 2367 . + . ID=g4118.t1.exon7;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 2261 2367 . + 0 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 2728 2941 . + . ID=g4118.t1.exon8;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 2728 2941 . + 1 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 3211 3302 . + . ID=g4118.t1.exon9;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 3211 3302 . + 0 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . exon 3510 3688 . + . ID=g4118.t1.exon10;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . CDS 3510 3642 . + 1 ID=cds.g4118.t1;Parent=g4118.t1 NODE_697_length_18883_cov_41.1547 . three_prime_UTR 3643 3688 . + . ID=g4118.t1.utr3p1;Parent=g4118.t1 #PROT g4118.t1 g4118 ALATDQLLNSSECLGADSLVKLLKNYCRNVDIKTAITVGVVGYPNVGKSSLINSLKRTRAVNVGPTPGVTKQAQLIHLDKNIRLLDCPGIVFPSGSSESDIILRNCVKVEQLTDALEPVAIILRRCVPEQIMELYGVPAFADSNEFLVHLARKRGKLRKSGIADIESAAKAVLQDWNTGKIPFYTRPPATDSSHLGNATIVSGWGREFSIEEIAADDKATLGKLGNDAKQYMTLESGAAAMDDAAMMNADEDMDDGDDDDDDEDDNDDEDDDEDDESGEMEVDADVIVPDSKVVAPIAAKSKTKEKAAAVTGAALKQKLKTAEDDHNPQVNRDKKKLQKAAKKTKRRVESGKMDMDEGEDDEDDGHVVQDDSYDFATDFVPTNGNRMAVLSTLQDDDSDDDDAMDHDRESTPEVD* # ORIGINAL: g10678.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 5203 5558 . + . ID=g10678;Name=g10678.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 5203 5558 . + . ID=g10678.t1;Parent=g10678;Name=g10678.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 5203 5399 . + . ID=g10678.t1.exon1;Parent=g10678.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 5203 5399 . + 0 ID=cds.g10678.t1;Parent=g10678.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 5483 5558 . + . ID=g10678.t1.exon2;Parent=g10678.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 5483 5558 . + 1 ID=cds.g10678.t1;Parent=g10678.t1 #PROT g10678.t1 g10678 MQIPRALQARCRTALQDGFATRSQCLGDNGRMCTCVAIDGVVVRVLCRHRRLTAVPTGIPFTVQILDLSHNRIAEVLTSDFAGLPELVHL* # ORIGINAL: g10676.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 1611 2966 . + . ID=g10676;Name=g10676.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 1611 2966 . + . ID=g10676.t1;Parent=g10676;Name=g10676.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 1611 2966 . + . ID=g10676.t1.exon1;Parent=g10676.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 1611 2966 . + 0 ID=cds.g10676.t1;Parent=g10676.t1 #PROT g10676.t1 g10676 MVSPVISRPMSMAAFAALLVFCALLVDADSFENLCHDDYGHRGHDKCRPFVHYLNFTGTAEDTAGVHGRPAIVFTTEDKHGRGLRVYYSIATDVHGTKWTRPINIVRRYFALQLSPFSARSVQLEVIAGRPAVAFFASPNNNTASGPYPLVYVRSADRLGRRWEAPILVTNGANVNCTTEPAFPLCALQQRSPQPFSFSLAAVARRPVICFAAIVPIRGFPHQALLRACLAAAHGHSTDWRFLPGYPEGIFLDPNIAPDNFLLSAHQVGGETGVALTIGTRTSAFEESWLDFQKPSSEFEVTVDRLNLSHSAESIQSTGNSPFLGLVGGRAAITYLELDPNHTATFALKYVSANNTAGTTWRLATYVALDVWPLFEPSLAEVRGRPLVAYVGSKLTLLRAKDVGGTQWLEPIGTGLDVSPAGKIARIDENVAGIAVSIFPNNGLAYVSVVC* # ORIGINAL: g10675.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 74 1156 . - . ID=g10675;Name=g10675.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 74 1156 . - . ID=g10675.t1;Parent=g10675;Name=g10675.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 1130 1156 . - . ID=g10675.t1.exon1;Parent=g10675.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 1130 1156 . - 0 ID=cds.g10675.t1;Parent=g10675.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 74 762 . - . ID=g10675.t1.exon2;Parent=g10675.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 74 762 . - 0 ID=cds.g10675.t1;Parent=g10675.t1 #PROT g10675.t1 g10675 MECSTIPTATPLKWIGGGSIGEGGASVVGTCIGDSGPDYATSKTYQWLPAEIDVDDNGRAVIRSYINNLHPYHHRDLYGTIASIFERFVPLFSRVLTDMLAPRMRTYVTYDNYGKTHLDIASDSDDDNNGNVNEAGRAANGQAGRDVTENSGHGYRASSPNQPPVCRFHVPDAPSKIVSLRGRRVQVIVKLSNIVLTPEYPEYGGGVWHVEGMQNERIVASGIYYYASENISESRLQL # ORIGINAL: g10677.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 3644 4231 . - . ID=g10677;Name=g10677.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 3644 4231 . - . ID=g10677.t1;Parent=g10677;Name=g10677.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 4217 4231 . - . ID=g10677.t1.exon1;Parent=g10677.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 4217 4231 . - 0 ID=cds.g10677.t1;Parent=g10677.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 3644 4033 . - . ID=g10677.t1.exon2;Parent=g10677.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 3644 4033 . - 0 ID=cds.g10677.t1;Parent=g10677.t1 #PROT g10677.t1 g10677 MSSDVSFTDGSEKSVSLVDVVGQQDSQLTLEYFLNVLLGSLTQDGTIFIATTNHLEVLDPAFYRDGRFDVRIEMKMCDSYQINTIYSQLMMRPIPPALLERIPEDKYTPANIIFHTKPYMFGDFTDEEILAPFL* # ORIGINAL: g10680.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 8442 10272 . - . ID=g10680;Name=g10680.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 8442 10272 . - . ID=g10680.t1;Parent=g10680;Name=g10680.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 9037 10272 . - . ID=g10680.t1.exon1;Parent=g10680.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 9037 10272 . - 0 ID=cds.g10680.t1;Parent=g10680.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 8442 8876 . - . ID=g10680.t1.exon2;Parent=g10680.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 8442 8876 . - 0 ID=cds.g10680.t1;Parent=g10680.t1 #PROT g10680.t1 g10680 MWGDSTSAGATVQSLSTGGNTDGVALAGIKSAATNVTLVSSPPVDMNDTIHRGDVDLILTAMRALQPDASVQTAGLKALEDLATVDESKRVTIAAKGGISAVLLAMRAHGGHAGVQEHGCAALRTLGRNDDNEMTIAREGGIGAVLSAMRAHGGHAGVQKEGCAALCNLGGNDDNEMTIAQEGGIGAVLSAMRAHDGHAGIQEQGCGALWRLGENDNNKVTIAQEGGIGAVLSAMRARGVHAGVQEQGCGALWSLGRNAYNKVTIAQEGGIGAVLSAMHAHGGHAGVQNSGCAALCNLGGNDDNAVTIAQEGGIGAVLSAMRAHGGHAGVQNSGCAALKTLGRNDDNKMTIAQEGGIGAVLSAMCAHGGHADVQEQGCAVLTNLGGNANGDGVEKDLSQAFKSYIKVAEQGEKDLSQAFKWYMKAAEQKNTIAQFIIGVRYEDGEGVEKDMSQAFKWYTKAAEKGMEDAQINIGRCYADGDGVEKDLSQSFNWYMKAAEKGHSEAQYYAGGCYADAKGVKRDRSQAFAWYMKAAEQGHRRAMHQVAEMLERRCGRP* # ORIGINAL: g10679.t1 original gene structure, not modified by PASA NODE_1287_length_12386_cov_49.2858 AUGUSTUS gene 7703 8389 . - . ID=g10679;Name=g10679.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS mRNA 7703 8389 . - . ID=g10679.t1;Parent=g10679;Name=g10679.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS exon 7703 8389 . - . ID=g10679.t1.exon1;Parent=g10679.t1 NODE_1287_length_12386_cov_49.2858 AUGUSTUS CDS 7703 8389 . - 0 ID=cds.g10679.t1;Parent=g10679.t1 #PROT g10679.t1 g10679 MAQMYDEGRGVARDDAKALALLRNNGKEYMIGSVFPYDEQLCPHHDLASRKMLFPTPFLDRDDPAPSDSGVARSLRELAMIRLSAAIREKLEWREKMGDPQVVERWKAEALSQGATSAMFRYVLKELRYHASLVCGAIEPSSVDGTWRADGHVPAEIKAKLLESVAALENVPERVKDYHPGSNGQVVDLVHPSLYCYVEGLSRTTACEANPPVLRPPVLRPPSLEPRP* # ORIGINAL: g8143.t1 original gene structure, not modified by PASA NODE_4173_length_2075_cov_58.4665 AUGUSTUS gene 2 168 . + . ID=g8143;Name=g8143.t1 NODE_4173_length_2075_cov_58.4665 AUGUSTUS mRNA 2 168 . + . ID=g8143.t1;Parent=g8143;Name=g8143.t1 NODE_4173_length_2075_cov_58.4665 AUGUSTUS exon 2 168 . + . ID=g8143.t1.exon1;Parent=g8143.t1 NODE_4173_length_2075_cov_58.4665 AUGUSTUS CDS 2 168 . + 2 ID=cds.g8143.t1;Parent=g8143.t1 #PROT g8143.t1 g8143 TTPCSWEKATALRTAVCASTAAQCMFTPLKRMGYRPFTPNAASLTMGFAPLLRSP # ORIGINAL: g7953.t1 original gene structure, not modified by PASA NODE_1558_length_10478_cov_40.7041 AUGUSTUS gene 1 3581 . - . ID=g7953;Name=g7953.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS mRNA 1 3581 . - . ID=g7953.t1;Parent=g7953;Name=g7953.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 351 3581 . - . ID=g7953.t1.exon1;Parent=g7953.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 351 3581 . - 0 ID=cds.g7953.t1;Parent=g7953.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 1 54 . - . ID=g7953.t1.exon2;Parent=g7953.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 1 54 . - 0 ID=cds.g7953.t1;Parent=g7953.t1 #PROT g7953.t1 g7953 MGARCNPLVLSVVAILTALLLGEHVAAVAWPPNVPSPPTGFADSTKPDPNELLTASTVDEPASTPTLTLTIPLSSSSTLLAILLSLNLSSMQRTPGIPLWLRVRLVIPPLIAAPVSFPLVTNGAAGPVKIVIPMSNYTSGAESAFIKAGINLHNATVSIEGEGIVALEYGCGTATDGTSASLTVFNGTLVINNVTMVMDTALFSKTMDWPENAAKLQPFDCSAVSVMPTGRLSLRTVSVVNTYMGIVASKGVAEVRNLRAVGVLALLKRPWFSVDGRGELLLRNIDMQTEVRYDITMLANTVGILALGDDASTVRGSRIVADYLRLASIRTPVPLAKSLPDGTPAHPTPNGASVFSVMCGGLGAAQIAVYGFQFVGARPSQSGYLATVFNIDGSSTSVTSSRYPDPLCRMLSVNSTMGGLAFGPGRTATIVVGKFQMEGGVVARMDAPAFVASFGSEVAVTGGAFHSLSATSMDVEAASVFVIKSLSSLVVTNCVFGEKISAGIVRLDDSQASIVSSSFMQLVYELASGRAAMVTATDVDVWGLTVRSAGVFHIDGTMRDSMLMVTNSRFRDLSVDTRLAPTFALVEGTARCTLDGVEISSVTNEDLYRIGDDNMFGINENIGVGGVLRFESGYTVLNNVTIVGGHVPSGGGGAVAIGDGVLEMHGCRISGTSARYGGALYLSANSIVMLDGLTVENSVATVAGGCVYVNGNVRNIRMRGVNLSGCVVAEQAIDASGFLESVVGTGGAIHVGIRSHRGAVELLRDWTLENVTVTHSWATLGPSIFVAGSSTPHDSVVRGMTYIPRPPPPIDGLNASGWCGGGAITSEPVRLISGIDAPLVAESGGLLPVFSISTADITGARVSFAPSTAPLLRLVVRKEGADARDSAQLADVALEGQTAFGFGFAAVVSFADIRVYGHPGLYALGLVSSSPVRNDSEPLIAEFSLPFRIDVCAASHVVAVRGDGKPYCVNALPTPSSSRAGVIVPAVLVPVFVVVAVAIGYRFWRAKQMRKSLEARKEFMERQVTMREALRQFEIERENVALMDVLGSGEFGIVYRARVALPGGRMRMCAAKQLKSTASYEERVEFVSEADVMKG # ORIGINAL: g7954.t1 original gene structure, not modified by PASA NODE_1558_length_10478_cov_40.7041 AUGUSTUS gene 4016 6254 . + . ID=g7954;Name=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS mRNA 4016 6254 . + . ID=g7954.t1;Parent=g7954;Name=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 4016 4146 . + . ID=g7954.t1.exon1;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 4016 4146 . + 0 ID=cds.g7954.t1;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 4324 4561 . + . ID=g7954.t1.exon2;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 4324 4561 . + 1 ID=cds.g7954.t1;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 4697 5021 . + . ID=g7954.t1.exon3;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 4697 5021 . + 0 ID=cds.g7954.t1;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 5416 6254 . + . ID=g7954.t1.exon4;Parent=g7954.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 5416 6254 . + 2 ID=cds.g7954.t1;Parent=g7954.t1 #PROT g7954.t1 g7954 MTVVNGDDPEDTAPLVDVEDAQGDTQEHAPLLGDESEPLRAAATFRGREKAYAYATLSVICLAYITNQMDRSMLGYVQSDVRTDLSLSDGEYGLLAGYGFSLMFVATGVPLGRMVDTWPRKYLLIVGLIVWSGMTAVAALTHTFGQFLATRIGVGIGEAACNPAAFSLISDYFPPEYRPFANALYNSGIYIGGTMATVSEAIAGRVGWRWTYGSYGFVGLGVAVVMMLAVFEPPRGRYGNALSNKPATTYSLRDTFRYLITLDAAWMLAFAAGIRSIGGYIFGYYVFARLNAIYGHLTYYYAVCTCLGGLVASYGGGYLTRLWVVRDSRAAAYVPALGALMSCPFVALFLYADAIVGEVNSRSEALALVSIFFAYATAEVWGGPAASIYQSILPANMQGSGFAVYFFLLTLLGGAGPEICGRFESEVINGSTVAKASVLTGLIVGSYVVCAVGFVISAAFVSSDVRRKESFEATRLFEPVSRVRIALYVAGIIALTALAGALMGLSFTDR* # ORIGINAL: g7955.t1 original gene structure, not modified by PASA NODE_1558_length_10478_cov_40.7041 AUGUSTUS gene 6948 9029 . - . ID=g7955;Name=g7955.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS mRNA 6948 9029 . - . ID=g7955.t1;Parent=g7955;Name=g7955.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS exon 6948 9029 . - . ID=g7955.t1.exon1;Parent=g7955.t1 NODE_1558_length_10478_cov_40.7041 AUGUSTUS CDS 6948 9029 . - 0 ID=cds.g7955.t1;Parent=g7955.t1 #PROT g7955.t1 g7955 MKFRQSRLDDERSTALTALVALCIFGSVAFLPLAEGLQLWCAPGTFVGTNYNVDDPDGVLQCMICAKGLYMPRWNNESKCLPCDAGDICADVDPSRGCVSPQKYCPLGGAVGPRETGWVHGLPPLDVSSLYGIPTSTYISSVSSKEHVEYTVTPYDLMHSSSFSANSPNLILLITYFVCVCVSVPVLLRTDLGLRALGYIDHVYEVPTRDISVPLTPVPPSVGDSTQCGGETIMATPVRTRDTARAVFTFLAIVGAAMAAAYVVEDFVKNRYIEERTLGPITALNEVSVGGFNITDDVMDTFPVPVFTFLLLGTSVRAENTTLSVYVEFDENGGVNETVNIDDLGKGDGPRASMRIPPDEFLWPSNWKNLAFLETHSSRIGNWAAWVTDALDVWDDARPADPSVLLKEGKGQQSSSATKKRRIKPAGMESLRRPEDIATCRAMGRGHCTIVMMRRSVNMVSMPKFTFGTHARFTFRVGSTLQSAGPVFVQAMRMRIITLSWRTEMMGDDKRNALTWIEGGATLTQTNMGDLPVSSFQYVPDLRGVLYTKTLLRGPKMEPMSRGFDLQVGERSEGTSGTGPTFKDAFLADPYDPAGTAILRVDITAPPYVLQIDIRERISIAAFLTALASLPAAVVGAGGVSYSVFVLARRWGSRLRRHVGGHSMVLSSLRESRLSTASLDEPLISHDNNNSIV* # ORIGINAL: g13321.t1 original gene structure, not modified by PASA NODE_2266_length_6988_cov_43.5484 AUGUSTUS gene 725 3874 . + . ID=g13321;Name=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS mRNA 725 3874 . + . ID=g13321.t1;Parent=g13321;Name=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 725 1061 . + . ID=g13321.t1.exon1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 725 1061 . + 0 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 1296 1348 . + . ID=g13321.t1.exon2;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 1296 1348 . + 2 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 1581 1737 . + . ID=g13321.t1.exon3;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 1581 1737 . + 0 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 2005 2126 . + . ID=g13321.t1.exon4;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 2005 2126 . + 2 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 2333 2489 . + . ID=g13321.t1.exon5;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 2333 2489 . + 0 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 2788 2882 . + . ID=g13321.t1.exon6;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 2788 2882 . + 2 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 3107 3214 . + . ID=g13321.t1.exon7;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 3107 3214 . + 0 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 3410 3477 . + . ID=g13321.t1.exon8;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 3410 3477 . + 0 ID=cds.g13321.t1;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 3739 3874 . + . ID=g13321.t1.exon9;Parent=g13321.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 3739 3874 . + 1 ID=cds.g13321.t1;Parent=g13321.t1 #PROT g13321.t1 g13321 MEEFLADYGMVWIGKNEDGADVDDGAHSNDAHNSAEIVDATDARITRHIQGISAHVQSASVAANVHSRESSPPQRTLAGSALGMRDAVSAATPAYVNFDKIIANVQDLNAMAGDGVAKIASAPDGSRRLRLPDPVTLVLYKNGLVVDDAPFRSYLDEATELFVRDLVDGYFPSEFQNKYPDGVPFNVVDKRTVDNGDAKPFVGTGFVLGGTIKPSSLVSTNLRQHSDRRQDKSPGEGRSRPSSGQYRDGRREGTVGVTVEQRQGMHLVNPQARSAATTDEFLSRLPKAVVKDGKVIDVRGSIADLLKPTTKQPELVVADAIALSPNSQQKTTTVQVKLDGGEQTLIVKLRFNDTIADLRQYIDRHRKGTSTYIIRTAFPSRIYDDESATLEECGLVPNATVHIAAVSAKR* # PASA_UPDATE: g13323.t1, single gene model update, valid-1, status:[pasa:asmbl_3897,status:12], valid-1 NODE_2266_length_6988_cov_43.5484 . gene 5546 6828 . - . ID=g13323;Name=g13323.t1 NODE_2266_length_6988_cov_43.5484 . mRNA 5546 6828 . - . ID=g13323.t1;Parent=g13323;Name=g13323.t1 NODE_2266_length_6988_cov_43.5484 . five_prime_UTR 6688 6828 . - . ID=g13323.t1.utr5p1;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . exon 6594 6828 . - . ID=g13323.t1.exon1;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . CDS 6594 6687 . - 0 ID=cds.g13323.t1;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . exon 6207 6309 . - . ID=g13323.t1.exon2;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . CDS 6207 6309 . - 2 ID=cds.g13323.t1;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . exon 5546 5879 . - . ID=g13323.t1.exon3;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . CDS 5870 5879 . - 1 ID=cds.g13323.t1;Parent=g13323.t1 NODE_2266_length_6988_cov_43.5484 . three_prime_UTR 5546 5869 . - . ID=g13323.t1.utr3p1;Parent=g13323.t1 #PROT g13323.t1 g13323 MDQVATVLEPTRQFAKDSARLLKRCNKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNILVGA* # ORIGINAL: g13322.t1 original gene structure, not modified by PASA NODE_2266_length_6988_cov_43.5484 AUGUSTUS gene 4389 5241 . + . ID=g13322;Name=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS mRNA 4389 5241 . + . ID=g13322.t1;Parent=g13322;Name=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 4389 4532 . + . ID=g13322.t1.exon1;Parent=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 4389 4532 . + 0 ID=cds.g13322.t1;Parent=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 4718 4892 . + . ID=g13322.t1.exon2;Parent=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 4718 4892 . + 0 ID=cds.g13322.t1;Parent=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS exon 5081 5241 . + . ID=g13322.t1.exon3;Parent=g13322.t1 NODE_2266_length_6988_cov_43.5484 AUGUSTUS CDS 5081 5241 . + 2 ID=cds.g13322.t1;Parent=g13322.t1 #PROT g13322.t1 g13322 MPRASRVGADGVEVSYGVIPVRRSRDGSAWEVLTVKGKGRHAHWSFPKGGVETFDADAIATATRELAEETGLSLERILCSEPFVTEYINGISNRKKRVGLFLAIVTGDVVLQEKEIGAGEWLRFDTGDTSTADAVLERLTFDGDKAVWRKAIDILSGCQ* # PASA_UPDATE: g6472.t1, single gene model update, valid-1, status:[pasa:asmbl_3421,status:3], valid-1 NODE_2072_length_7851_cov_43.0513 . gene 1697 4920 . + . ID=g6472;Name=g6472.t1 NODE_2072_length_7851_cov_43.0513 . mRNA 1697 4920 . + . ID=g6472.t1;Parent=g6472;Name=g6472.t1 NODE_2072_length_7851_cov_43.0513 . five_prime_UTR 1697 1800 . + . ID=g6472.t1.utr5p1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . exon 1697 1821 . + . ID=g6472.t1.exon1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . CDS 1801 1821 . + 0 ID=cds.g6472.t1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . exon 2065 2144 . + . ID=g6472.t1.exon2;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . CDS 2065 2144 . + 0 ID=cds.g6472.t1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . exon 2300 3752 . + . ID=g6472.t1.exon3;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . CDS 2300 3752 . + 1 ID=cds.g6472.t1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . exon 3967 4920 . + . ID=g6472.t1.exon4;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . CDS 3967 4392 . + 0 ID=cds.g6472.t1;Parent=g6472.t1 NODE_2072_length_7851_cov_43.0513 . three_prime_UTR 4393 4920 . + . ID=g6472.t1.utr3p1;Parent=g6472.t1 #PROT g6472.t1 g6472 MAKEKKKGQSGAATNYISRARAVRKLQISLADFRRLCILKGIFPREPKNKKKVSGGSTANKTYYYVKDIQFLAHEPLLQKFREFKVFIRKLKRAVHKNEPGLARSLEESKPIYNLDRLVKERYPTFIDAVRDLDDALCMVFLFAQMPRQGGRITSDLVGKCWRLSREFESFVVRTRALRKTFLSIKGIYYQAEIMGQTITWIVPYQFSQGEIPTDVDFRVMLTFLEFYATLLGFVNYRLFSSLSLKYPPRIDAAMDANAGGLQALVTESAAEGQNADGTTSATATPAESKEDQARRKESNKRVASLGFAMSKILAKDAKQGDANTAESEDVEMKDADKEASAGDEFVALPGGDEAPTLSGSSEQFDGTQRMFEGLRVFVSREVPRHALEFVLRSRGAQVSWDETVGAGSSFKENDTSVTHQIVDRPTQGHVFLDRTYVQPQWVFDCLNAGKRILAGDYAPGRTLPPHLSPFVEATEGEYVPQGAPTGDDNGESVAADMDADSEDEEEEGDESAGSADEDAGASDDEAAVFQKELEAELKGKSFSQQQQQAKKPKKGGKVEAAAPAAAPAQKKRKKDEASAAEEEKELAKIMMPKRQKRLYDQIMFSKKKKTEEAVKLEGRRREIEKAPKAKPPTKSPSKPQPKPESKPQPKAKAAPKRK* # ORIGINAL: g6473.t1 original gene structure, not modified by PASA NODE_2072_length_7851_cov_43.0513 AUGUSTUS gene 5003 6123 . - . ID=g6473;Name=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS mRNA 5003 6123 . - . ID=g6473.t1;Parent=g6473;Name=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 5987 6123 . - . ID=g6473.t1.exon1;Parent=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 5987 6123 . - 0 ID=cds.g6473.t1;Parent=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 5640 5902 . - . ID=g6473.t1.exon2;Parent=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 5640 5902 . - 1 ID=cds.g6473.t1;Parent=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 5003 5445 . - . ID=g6473.t1.exon3;Parent=g6473.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 5003 5445 . - 2 ID=cds.g6473.t1;Parent=g6473.t1 #PROT g6473.t1 g6473 MASQKALEKSTNEVDADAGYATLVEKLKSLPPNVLAKQGLPPIAFWSLAGDEEIIQKLLAAEADVDVETDEGLTPLMYAVEAKSIGVCRALVEADARVDKEGSACTTALMRACQKGLVDIAAFLIESGADVNHEGKTGDTPLLSAVAGGSVEAVELLIDNGANVNHVPACLASRGFTPLMLAALNGDAKCASALVEGGADVVKVSAKLGWSALDVARRGGRKEVMAVLQKAASYSSSRLAMSKAMWRVWPIITKVPVLLCFVFVYYAVHSMMHGPEEQDF* # ORIGINAL: g6474.t1 original gene structure, not modified by PASA NODE_2072_length_7851_cov_43.0513 AUGUSTUS gene 6767 7719 . + . ID=g6474;Name=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS mRNA 6767 7719 . + . ID=g6474.t1;Parent=g6474;Name=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 6767 7184 . + . ID=g6474.t1.exon1;Parent=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 6767 7184 . + 0 ID=cds.g6474.t1;Parent=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 7316 7462 . + . ID=g6474.t1.exon2;Parent=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 7316 7462 . + 2 ID=cds.g6474.t1;Parent=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 7565 7719 . + . ID=g6474.t1.exon3;Parent=g6474.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 7565 7719 . + 2 ID=cds.g6474.t1;Parent=g6474.t1 #PROT g6474.t1 g6474 MRRPDGRGSINSNGMNSDESSDDEHGHGHGHGHAPRRSSGEERRTASVGGASQGHGHSHSSGGHGHGHGGQEDERSHSHGAAPPIVNYVEEDTPLLESPPPGVRGRQRNPEHAKEARAARNKLLLASVLCAIFMVGEVVGGFMAHSLAIMTDAAHMLSDLAGFMISLFAIWLSQRPSTKTMSFGFHRAEIIGAIASVLLIWALTGVLVYEAVLRVIDQPDVDGKIMCITAACGVAVNIL* # ORIGINAL: g6471.t1 original gene structure, not modified by PASA NODE_2072_length_7851_cov_43.0513 AUGUSTUS gene 125 1359 . - . ID=g6471;Name=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS mRNA 125 1359 . - . ID=g6471.t1;Parent=g6471;Name=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 1220 1359 . - . ID=g6471.t1.exon1;Parent=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 1220 1359 . - 0 ID=cds.g6471.t1;Parent=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 721 1042 . - . ID=g6471.t1.exon2;Parent=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 721 1042 . - 1 ID=cds.g6471.t1;Parent=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS exon 125 403 . - . ID=g6471.t1.exon3;Parent=g6471.t1 NODE_2072_length_7851_cov_43.0513 AUGUSTUS CDS 125 403 . - 0 ID=cds.g6471.t1;Parent=g6471.t1 #PROT g6471.t1 g6471 MWRAVKEGVIAAFKEGASEVKAPLKEKMLYRFRTEEDVGKWLCTSDKQVGGFSEANFEMGDNCGRFHGNISLQRPDNPDIKRTGFAGMRSRFLPKGRFTGPTYHDLTDMLYLEMRVRGDGRAYLANLKSDSLQADDLHQAFLYTRGGPHFETIQIPLSSFLLTFRGFIQSEQMEMNLSKITFIGVTLADKNAGPFSLEIDYMKATRVANREALASQSYDPQAEMALADEKSEQLRKDKDGGQTAGS* # ORIGINAL: g5377.t1 original gene structure, not modified by PASA NODE_4622_length_1398_cov_43.2207 AUGUSTUS gene 1 846 . - . ID=g5377;Name=g5377.t1 NODE_4622_length_1398_cov_43.2207 AUGUSTUS mRNA 1 846 . - . ID=g5377.t1;Parent=g5377;Name=g5377.t1 NODE_4622_length_1398_cov_43.2207 AUGUSTUS exon 1 846 . - . ID=g5377.t1.exon1;Parent=g5377.t1 NODE_4622_length_1398_cov_43.2207 AUGUSTUS CDS 1 846 . - 0 ID=cds.g5377.t1;Parent=g5377.t1 #PROT g5377.t1 g5377 MSTIVIEVPAQSLSSPLAAFDLDGTLIKTKSGKPFPTSHTDWQFAYSNVPDVLRKFHNDGYRVCIVTNQASRTSRTFEDIGLLRAKLVAIVEAVGVPISVYAALEHDEYRKPSPGFYHMICRNGRPSHAFFCGDAAGRSGDFANSDLMFAKNAGIEFKTPEMVFEPTPTFVTLTDDDFAQITDYSSQQVVLLVGLPGSGKSTLAKQFEERGFEIVNQDTLKTLPKCKSACRTALALCKSVVVDNTNPTKKVRAEYVQIAAAANVRISAIVMDVSVEVAKQNL # ORIGINAL: g12513.t1 original gene structure, not modified by PASA NODE_2254_length_7052_cov_37.7346 AUGUSTUS gene 185 3186 . + . ID=g12513;Name=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS mRNA 185 3186 . + . ID=g12513.t1;Parent=g12513;Name=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 185 465 . + . ID=g12513.t1.exon1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 185 465 . + 0 ID=cds.g12513.t1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 634 780 . + . ID=g12513.t1.exon2;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 634 780 . + 1 ID=cds.g12513.t1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 927 981 . + . ID=g12513.t1.exon3;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 927 981 . + 1 ID=cds.g12513.t1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 1077 1406 . + . ID=g12513.t1.exon4;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 1077 1406 . + 0 ID=cds.g12513.t1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 1506 1694 . + . ID=g12513.t1.exon5;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 1506 1694 . + 0 ID=cds.g12513.t1;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 1885 3186 . + . ID=g12513.t1.exon6;Parent=g12513.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 1885 3186 . + 0 ID=cds.g12513.t1;Parent=g12513.t1 #PROT g12513.t1 g12513 AIKELDFFNEARNMQRVADNLRRTNIDCIIPAVSEGLVSERILTMEWVDGFKVTDVGRLKALGIDRAALLSRICQAYASQVYTDGFFNADPHPGNILVSTKGGVVRPVLLDFGLTKELPHDLRQAFSRMIHSAMVMDSGSLLRSFDEMGLRLNRTNPGEDMNNIRFLLRDTAPSAEARSQFRAHNDAINAKRKELPPSMRNPIDAWPGELLFFFRVTSLLRGLCSSLDTRIPIVQMMGPYAHRALLNDFPQDMHAKDVVYASPSLSSTHDKVVELLRRLHARGTFLGIQVAAYKDGVKVVDVAAGVMGLADPRAVTPSTLMNCFSVTKAVTATAIHMLAARGLVDYDAPVAKYWPSFAAEGKGLVTVRHVMAHTAGLESSVPVFTPISELCDYELMMSRVAAAKPSSPAGHVGRYHYYSFGWLCGGILRGALYGPAATAPTDDGKPAGKTSTRAAASGDGDGDAGAKGHTAVTDIARFVREEIAIPLGIESEFFLGCLPASEGTRVATLANGFGSSGGPPTAEDVATLIQAIKLRQEGDGAPSPATVADTTNATVTATASATATAKGADASGAATKGSMSDLEKAFGLSGAIADPCVFNTRQIRNACIPAANGHFSARSLARFYDCVARGGIVSPDAVASATSAVGRTWAEGSPSSSISTRIFPAETLSKVSTQQSLVSLPFVDEGMPYCLGFRLYPLRDKATGVVAQGRCIGHSGLGGSMALCDLHTRTSIAVTVNRLGFEREAADEVMSLLLAELAGAEMAGLMA* # ORIGINAL: g12514.t1 original gene structure, not modified by PASA NODE_2254_length_7052_cov_37.7346 AUGUSTUS gene 3728 6707 . - . ID=g12514;Name=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS mRNA 3728 6707 . - . ID=g12514.t1;Parent=g12514;Name=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 6623 6707 . - . ID=g12514.t1.exon1;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 6623 6707 . - 0 ID=cds.g12514.t1;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 5849 6125 . - . ID=g12514.t1.exon2;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 5849 6125 . - 2 ID=cds.g12514.t1;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 4388 5589 . - . ID=g12514.t1.exon3;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 4388 5589 . - 1 ID=cds.g12514.t1;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS exon 3728 4200 . - . ID=g12514.t1.exon4;Parent=g12514.t1 NODE_2254_length_7052_cov_37.7346 AUGUSTUS CDS 3728 4200 . - 2 ID=cds.g12514.t1;Parent=g12514.t1 #PROT g12514.t1 g12514 MASNFSAEGDAARVQSTLPVHGVRYSVGDCVYLASEAPGAPFDICRILEFFPHGSEQNPLEKHNGKLEDDPSDDRKEDDGDSSSGDGGDAEMSVNWFLRVSDLEDPNDKICLRMDSGLGARELVQSEVVDVNPVGALRGKCVIKHVEHIERLHDYAALPDSFFYQYKRPISGSVLVVADPRDTDLRRKTGFIRIGQEYQADIPLMRARLFAAKRASVVCGDAIHVPEACLLSPEELDSYLAEARAITLTRRRQRMIPPVSQYVPEDLHIQRDDHHRSYVSAYGGVSHRDGFHAGAGASQDRAPANRSSFPECAMIASDGEMGLVRSLTMLERQKCDTHAALVDVASAPVDVETLDTWEEDERIAFDKGVVRHGKCLGNVVRDFLNHRAPGDVIAYYYLWKKRSTLYARCVKKPKVRETFDTPTDIIGTTSPMVASNETQIGIGGMGGKRATAADDIHDEWGNVHEEEEDDDDSDYGGGSRARKVFRADDGGAHLLASNAAMTDYGSDSSEDVGRGGRRKMRCVHVGVGVNVDVEVGVEVGVRVGVDVEVFVEVFLALEARRGVVVPVEERREAEEAGDGEDGAGASKGVAIGVALTWALTCAAAEACLHAASDSRGSLLCRTVLPPLLLWPTALRFLHVACHSLPYFEELMSADDAMTRFSCVRAPINQRHPGTHADA* # ORIGINAL: g12523.t1 original gene structure, not modified by PASA NODE_5057_length_1047_cov_33.7191 AUGUSTUS gene 142 821 . + . ID=g12523;Name=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS mRNA 142 821 . + . ID=g12523.t1;Parent=g12523;Name=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS exon 142 223 . + . ID=g12523.t1.exon1;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS CDS 142 223 . + 0 ID=cds.g12523.t1;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS exon 351 431 . + . ID=g12523.t1.exon2;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS CDS 351 431 . + 2 ID=cds.g12523.t1;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS exon 524 608 . + . ID=g12523.t1.exon3;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS CDS 524 608 . + 2 ID=cds.g12523.t1;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS exon 713 821 . + . ID=g12523.t1.exon4;Parent=g12523.t1 NODE_5057_length_1047_cov_33.7191 AUGUSTUS CDS 713 821 . + 1 ID=cds.g12523.t1;Parent=g12523.t1 #PROT g12523.t1 g12523 LVSQEEANRRGVVYDQYKCSFLFNLNSDYVVDATRKGNKIRFANHSVNPNCEARVMMVNGDYRIGIYAKKSIQAGDELFFDYSYKQTDIIKFVNIEQRRRGRYVPQQYLCKTCVADCN* # ORIGINAL: g8396.t1 original gene structure, not modified by PASA NODE_1839_length_8976_cov_41.2354 AUGUSTUS gene 1289 6977 . - . ID=g8396;Name=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS mRNA 1289 6977 . - . ID=g8396.t1;Parent=g8396;Name=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 6815 6977 . - . ID=g8396.t1.exon1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 6815 6977 . - 0 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 6058 6552 . - . ID=g8396.t1.exon2;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 6058 6552 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 5557 5703 . - . ID=g8396.t1.exon3;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 5557 5703 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 5120 5359 . - . ID=g8396.t1.exon4;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 5120 5359 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 4808 4910 . - . ID=g8396.t1.exon5;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 4808 4910 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 4508 4649 . - . ID=g8396.t1.exon6;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 4508 4649 . - 1 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 4065 4146 . - . ID=g8396.t1.exon7;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 4065 4146 . - 0 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 3867 3928 . - . ID=g8396.t1.exon8;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 3867 3928 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 3654 3733 . - . ID=g8396.t1.exon9;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 3654 3733 . - 0 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 3347 3476 . - . ID=g8396.t1.exon10;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 3347 3476 . - 1 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 3077 3149 . - . ID=g8396.t1.exon11;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 3077 3149 . - 0 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 2606 2854 . - . ID=g8396.t1.exon12;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 2606 2854 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 2296 2391 . - . ID=g8396.t1.exon13;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 2296 2391 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 1772 1973 . - . ID=g8396.t1.exon14;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 1772 1973 . - 2 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 1563 1650 . - . ID=g8396.t1.exon15;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 1563 1650 . - 1 ID=cds.g8396.t1;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 1289 1324 . - . ID=g8396.t1.exon16;Parent=g8396.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 1289 1324 . - 0 ID=cds.g8396.t1;Parent=g8396.t1 #PROT g8396.t1 g8396 MSAPSTSARGAAMATIPNLSPKEVMILTELKSPLGGLPVGHKIYRRKAYKDVFKGVALVDWLLSHSGATWQVETREGAISFGQRLLDLKLLQRVPDSIDPVPFEDSPMLYTWCDANRGSIMDIVDVGTVEEPASLSQNGNHTATDDAIANGTALSSSSSSSVPEHGDILSLRTRTLSNESDETSRRRALSVGEGATTEQPKAPQPVRRASMLFAGSGNKGSGEDFADRLEQLRSEHNKKVAALETELELLKKQLATAGEAPAAPSTTKVTTETQTELDDNKEKDDSAAPEASAADESGAGAGPPPPPPPPGMGPPPPPPPPPPGMGGPPPPPGPPPPPGMGPPPPMGGFGPAAGGPKKPVVKPKNKMRPLFWSRLLIDSMEKSPVFGDTLWHSVEEAPVEDEEFEALFAQKVMKRRRSSTVESLTTKKKLVASLLDAKRAQSLGILMSRLPRVDICQAIVELNHEALSDDIVKAIYTNRGTDEELALIESHVQKDDGMPLDKPEQFLYDLSKVPDLTSRLECWMFTKTFHGWQFDNNQKMKTLKSACEELASNMAIKRICGYVLAFGNYMNGGTTRGQADGFNVEILSKLRDVKTVDNDSSLLDYIVSCYCKKYDDPAAAQQPFPMPDPTAMSAASTVSLEELERDLKQMETKLEACRVMTNQIAAKSDGTPASAHFKDVMDSFVARARDILDAETSELNDVSTRYSEILKYFGVAKTRMGERMPPGDFFTIWHVFCDTFKESWKAEQHKLAKKRFEEIQQRRIERRESQKTRKLNESGTKSSLKQKLTPKKPFM* # ORIGINAL: g8395.t1 original gene structure, not modified by PASA NODE_1839_length_8976_cov_41.2354 AUGUSTUS gene 80 898 . + . ID=g8395;Name=g8395.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS mRNA 80 898 . + . ID=g8395.t1;Parent=g8395;Name=g8395.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 80 468 . + . ID=g8395.t1.exon1;Parent=g8395.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 80 468 . + 0 ID=cds.g8395.t1;Parent=g8395.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS exon 571 898 . + . ID=g8395.t1.exon2;Parent=g8395.t1 NODE_1839_length_8976_cov_41.2354 AUGUSTUS CDS 571 898 . + 1 ID=cds.g8395.t1;Parent=g8395.t1 #PROT g8395.t1 g8395 MESHRAVDGDTAPNNVAFATAVVPKSSTLREASIMSFDSIVTFVAIGWGTVSYWRGTWNVLDIYLYPDDLETSAWVSLGISAAIILTCHALRKVLLRATNRLAGAWRAILERLFTYFAGWGVVCSWRGIWYIWNVYILPDDPVASAWLSHGVGIALLLACLSLRCIYAPPGVVMMDDEEGAFVLDTLRSYWQRREANGQRMPVFKAKDCRVQPAGLALKRVDGGQDAHDNVLVEVVLH* # ORIGINAL: g12455.t1 original gene structure, not modified by PASA NODE_2677_length_5476_cov_40.5853 AUGUSTUS gene 1352 3872 . - . ID=g12455;Name=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS mRNA 1352 3872 . - . ID=g12455.t1;Parent=g12455;Name=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS exon 2704 3872 . - . ID=g12455.t1.exon1;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS CDS 2704 3872 . - 0 ID=cds.g12455.t1;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS exon 2260 2441 . - . ID=g12455.t1.exon2;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS CDS 2260 2441 . - 1 ID=cds.g12455.t1;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS exon 1789 1953 . - . ID=g12455.t1.exon3;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS CDS 1789 1953 . - 2 ID=cds.g12455.t1;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS exon 1352 1482 . - . ID=g12455.t1.exon4;Parent=g12455.t1 NODE_2677_length_5476_cov_40.5853 AUGUSTUS CDS 1352 1482 . - 2 ID=cds.g12455.t1;Parent=g12455.t1 #PROT g12455.t1 g12455 MEGETNDWDDWEEEEAPTVCLFCATQFPSPTEALDHARAEHSFDLSKEKSSLSLDFYRFVRLVNFVRQTRSADGVAAGAPWPAYIAAAGSTAFLDDDQYLKPFVADDPLLSFDFDEEYGDGAENGLDAVASAVDSNADVVVDEAAATRRALEAAEQRAKESEAECEHLRRVIAQMKESTRDLVLGSGSGSAATGPRDAGATGSDSESDGDANEEKPREAGDGTDSEDESMDYYFSSYSHYGIHEDMLRDRVRTEAYRDFCLNNPSLFRGKTVLDVGCGTGILSMFAAKAGAARVIGIDRSSIVRQARQNVAENGLSDIITIIRGKVEEVSLPVDTVDVIISEWMGYFLLYESMLDTVLYARDKWLAPGGGVYPDQASMYVVGLEDVQDRRTFWDDVYGFRMSSMKRTAFKDATIEMSRDECVITTPCTLRVLDMNACKVSDLIFKAPFTLVFKKDATCHGILSYFDIYFEENCTNPVHFSTGPHAEYTHWKQTVFNFEVPVQVKTGSVMTGTLSLKRHWKSHRSLDVTIAYEVENSGVPARSQRFLID* # PASA_UPDATE: g12456.t1, single gene model update, valid-1, status:[pasa:asmbl_4780,status:12], valid-1 NODE_2677_length_5476_cov_40.5853 . gene 4154 5440 . + . ID=g12456;Name=g12456.t1 NODE_2677_length_5476_cov_40.5853 . mRNA 4154 5440 . + . ID=g12456.t1;Parent=g12456;Name=g12456.t1 NODE_2677_length_5476_cov_40.5853 . five_prime_UTR 4154 4187 . + . ID=g12456.t1.utr5p1;Parent=g12456.t1 NODE_2677_length_5476_cov_40.5853 . exon 4154 4932 . + . ID=g12456.t1.exon1;Parent=g12456.t1 NODE_2677_length_5476_cov_40.5853 . CDS 4188 4932 . + 0 ID=cds.g12456.t1;Parent=g12456.t1 NODE_2677_length_5476_cov_40.5853 . exon 5121 5440 . + . ID=g12456.t1.exon2;Parent=g12456.t1 NODE_2677_length_5476_cov_40.5853 . CDS 5121 5440 . + 2 ID=cds.g12456.t1;Parent=g12456.t1 #PROT g12456.t1 g12456 METQIRELGELLLDSRPHIRENAADVLLGLTGSDEGRTIVATYRHHLVKPLCTVAISLKDSPPSIAMLCLKTIVNLSADETIGDYMLSQGIIPSLVDAVVSRISSADWAAMALANLTRTANGSEKLLCVGAENEGVLLVSLIEAFCKTPAWESTTLSPLAGGAGDAKQSVDKNGVSTGPNLHFIASVLSNVTQTPSGCKVITNRERCILPRLLPFTQHPDVVRRGGIAAMLKNCSFDASVHSWLLSDEVGVLPHLLLPLAGPEEFDDEDMDGMPDELQYLPAEKQREPDAQIRVILLEALTQVSAVFPSFSPVLLRPVTGIVYVLSPLSLAFKRPALSPPAICAFVVAAFVSVS* # PASA_UPDATE: g12454.t1, single gene model update, valid-1, status:[pasa:asmbl_4779,status:12], valid-1 NODE_2677_length_5476_cov_40.5853 . gene 224 950 . + . ID=g12454;Name=g12454.t1 NODE_2677_length_5476_cov_40.5853 . mRNA 224 950 . + . ID=g12454.t1;Parent=g12454;Name=g12454.t1 NODE_2677_length_5476_cov_40.5853 . five_prime_UTR 224 299 . + . ID=g12454.t1.utr5p1;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . exon 224 402 . + . ID=g12454.t1.exon1;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . CDS 300 402 . + 0 ID=cds.g12454.t1;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . exon 521 592 . + . ID=g12454.t1.exon2;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . CDS 521 592 . + 2 ID=cds.g12454.t1;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . exon 781 950 . + . ID=g12454.t1.exon3;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . CDS 781 881 . + 2 ID=cds.g12454.t1;Parent=g12454.t1 NODE_2677_length_5476_cov_40.5853 . three_prime_UTR 882 950 . + . ID=g12454.t1.utr3p1;Parent=g12454.t1 #PROT g12454.t1 g12454 MSAGVPSRLRKALFASAASSPSLSNSPGVIPLSGDLDAMNNALFEQSIAHEYATELAKKQHENNMTSLRETLKSLDGDRWMYDTARVGVPR* # PASA_UPDATE: g9377.t1, single gene model update, valid-1, status:[pasa:asmbl_9995,status:3], valid-1 NODE_91_length_41645_cov_44.2073 . gene 26266 36466 . + . ID=g9377;Name=g9377.t1 NODE_91_length_41645_cov_44.2073 . mRNA 26266 36466 . + . ID=g9377.t1;Parent=g9377;Name=g9377.t1 NODE_91_length_41645_cov_44.2073 . five_prime_UTR 26266 26379 . + . ID=g9377.t1.utr5p1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 26266 26522 . + . ID=g9377.t1.exon1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 26380 26522 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 26668 26775 . + . ID=g9377.t1.exon2;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 26668 26775 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 26916 27009 . + . ID=g9377.t1.exon3;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 26916 27009 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 27179 27286 . + . ID=g9377.t1.exon4;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 27179 27286 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 27553 27682 . + . ID=g9377.t1.exon5;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 27553 27682 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 27885 28027 . + . ID=g9377.t1.exon6;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 27885 28027 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 28166 28451 . + . ID=g9377.t1.exon7;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 28166 28451 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 28642 28818 . + . ID=g9377.t1.exon8;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 28642 28818 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 28971 29132 . + . ID=g9377.t1.exon9;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 28971 29132 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 29346 29808 . + . ID=g9377.t1.exon10;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 29346 29808 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 30034 30239 . + . ID=g9377.t1.exon11;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 30034 30239 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 30469 30645 . + . ID=g9377.t1.exon12;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 30469 30645 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 30872 30889 . + . ID=g9377.t1.exon13;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 30872 30889 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 31145 31274 . + . ID=g9377.t1.exon14;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 31145 31274 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 31488 31574 . + . ID=g9377.t1.exon15;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 31488 31574 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 31823 31896 . + . ID=g9377.t1.exon16;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 31823 31896 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 32067 32147 . + . ID=g9377.t1.exon17;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 32067 32147 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 32261 32339 . + . ID=g9377.t1.exon18;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 32261 32339 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 32637 32837 . + . ID=g9377.t1.exon19;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 32637 32837 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 33018 33171 . + . ID=g9377.t1.exon20;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 33018 33171 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 33457 33579 . + . ID=g9377.t1.exon21;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 33457 33579 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 33803 33896 . + . ID=g9377.t1.exon22;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 33803 33896 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 34037 34124 . + . ID=g9377.t1.exon23;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 34037 34124 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 34338 34477 . + . ID=g9377.t1.exon24;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 34338 34477 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 34669 34774 . + . ID=g9377.t1.exon25;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 34669 34774 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 34903 34949 . + . ID=g9377.t1.exon26;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 34903 34949 . + 1 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 35133 35231 . + . ID=g9377.t1.exon27;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 35133 35231 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 35444 35535 . + . ID=g9377.t1.exon28;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 35444 35535 . + 2 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 35699 35746 . + . ID=g9377.t1.exon29;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 35699 35746 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . exon 35940 36466 . + . ID=g9377.t1.exon30;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . CDS 35940 35999 . + 0 ID=cds.g9377.t1;Parent=g9377.t1 NODE_91_length_41645_cov_44.2073 . three_prime_UTR 36000 36466 . + . ID=g9377.t1.utr3p1;Parent=g9377.t1 #PROT g9377.t1 g9377 MHTATSRDRRPRRTCIALYGIALAFCVCAFAGLASAALEDIKTVYAWNEIKMSGDIPAPRCDHSTLVYNNKMYIFGGYSENDGSFNDMFVLDIHGVSRAIPTTGDVPDARSGHYAGLVGSKLVIAGGIADDTFDDIYYVDLALSEPLTWVKVTPSNPSDGPGPRAWGFAVAINSTSLFVYGGFNKYSQYDSHIISTTNWRWVREAYTCADASGGEIIPELKDRFIPSAVDSASRSIAGPQLQTLTASVDGLTAADQTNATALSLLITDHAALYSSLVNGTETTANGTDVSKMITCGGIYFCPNVTCTLPPPAEGMRIATDASGRYIYLYGGWMCGTTLGKGGPDCFNGDVFKFDLVARTWQRLDTVGDESLSFETSPPAKSYGSFRIIGNEGFEFGGAYKDAVLDNYFFNDLYVLNLTTSVWRTVNVRGQKPPERWSHTLSFYNRTGYLFGGCKSPNLFYNTLHKLFEVTPDPSRSIAFGPALTTNTVVGNTATFRVEIRDNAGVPLTFGGNDVVAFGFEKGGFSYFQSTIKDLSNGTYDASFKFVKAASFLLSVQYNGVDIKNSPFTIKLLADKPDATQSTVAIVTAAPTTGSPVEFDLSLFDQYLNKATTTGTVLSGTARAPSGVGFPITFGAPVASVSRASFEPTEFGAYTLEIYIDGKNATSPAPFTVQLKKSSTVVNLGIAVGVPVGCSLVLGVLIFVFGRRRYQRHRLEKELAQQNWRISGKDVAIAAWGSAGSRMFRSVVSVRSSRATSRASGVGSRSSKNNHETRNTYIKTGEWKGTTVALKTINQKELEITRDVLMEVHVVREARCANLVSFLGAIVEPPSLYIVNEYCSKGSLADILYDTKIQLDSMFKFSLLQDLANGMKYLHTSDINCHGRLKPSNCVVDGRWALKITDYGLWRFRFGGASLTASPYDDETGFDGADVFYQAPEHCAIGRPALNNISQKGDIYSFGIIASEVVTRLPAYSEHMGSPQEIVTSIIEADARPDLTEVETGIPPAFLALLRSTWHKLPAQRPTFDFISTEVKRLNPQKGGNVVDNIMRMLESYATNLEALVAERTVELDGEKRRAEELLYRMIPKQVADELKVGKKVPAETFEQVTIFFSDIVGFTVIAGDSTPMEIVELLNDLYVTFDSIVDEHDVYKVETIGDAYMCVSGLPNRNGLLHAGEIATMALSLLSSTTTFRIRHMPDKYLQLRIGIHTGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFALRIHMSDSTARVLATLGGYNVEERGEIQVKGKGSMRTYWLTGKAGFTKPLPSIELAASMSQHHFK* # PASA_UPDATE: g9374.t1, single gene model update, valid-1, status:[pasa:asmbl_9994,status:12],[pasa:asmbl_9997,status:12],[pasa:asmbl_9998,status:12], valid-1 NODE_91_length_41645_cov_44.2073 . gene 14863 18322 . + . ID=g9374;Name=g9374.t1 NODE_91_length_41645_cov_44.2073 . mRNA 14863 18322 . + . ID=g9374.t1;Parent=g9374;Name=g9374.t1 NODE_91_length_41645_cov_44.2073 . five_prime_UTR 14863 14914 . + . ID=g9374.t1.utr5p1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . exon 14863 16063 . + . ID=g9374.t1.exon1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . CDS 14915 16063 . + 0 ID=cds.g9374.t1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . exon 16173 16533 . + . ID=g9374.t1.exon2;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . CDS 16173 16533 . + 0 ID=cds.g9374.t1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . exon 16644 17131 . + . ID=g9374.t1.exon3;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . CDS 16644 17131 . + 2 ID=cds.g9374.t1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . exon 17512 18322 . + . ID=g9374.t1.exon4;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . CDS 17512 18207 . + 0 ID=cds.g9374.t1;Parent=g9374.t1 NODE_91_length_41645_cov_44.2073 . three_prime_UTR 18208 18322 . + . ID=g9374.t1.utr3p1;Parent=g9374.t1 #PROT g9374.t1 g9374 MADPSSSNYRRVPCSYFAKGLCNRGDGCTFIHSGPPATRRTSVDRKSFQSEGSASSSHSHPHQTVPGSGGPSPRRLPAGDALHRGPRSPAAVAAPLGSHSNAKHADSSPSHADRHTSSKGGTPSYNAVPPPSSLYSNTPSPSLQRDKSTPHTPARTPTQSPANHVPYRVTPNSQKGFFSHDLAELGRIDLCDGGSPLLVRGAVHYAQQRGTDGTSRRVAAVKVKLTDISAGRLTHRAFVCVVEWLEQWLVCLRDRLLAEEHASRADGCAPSVGVFDSQMSLVTLSLGFERNCLGDASASLAIEMLTRHVVWLRVAVLWLYMNRLGDSAAANIAAFIRAHPHPIAELHLSHNKITSLGAVAILRAVKESGLYERAPQPLWLRMEFNTISVDQALSALSPEEWCPAQSPQHASSMSEWRRGEVKTHTGPVPRHCKSTGPCMLYASRNGCDVPDAHSHAAAQEHLTPAEVSVAALLSPSIKESTHPGGANPAESPCTATGVMGQSEDTLSGPLFFIGRSSGDHAYEDGEHSVSIDSDDDATSLVGDMHDTLREGSNVVVALAGEDATRARTQGSARPPLVHLFMLQFQNQTWNDAPALKLAEAAPVGDCPLVVFLDTNAAYFMATGAEKQFSFASLMSRSARGLLARSGADKIIVVLTETVMSELDGMKSRWAAEGKREAAQRIKWLYSESGPMQCESLRPHLVALTAPDEALTIDDPFSSVLGSLGESSASQSSRNDRAIMSVVLRWNHVIGKQGRVLFLTGDKDALRLAKSTRVPSAAVEDLSRALDAIPGIGDRPLTSGDLIAAVPRAFVDDTGRPLGAPLAPPRTFIDMLAEAASLVEALVAQIESGTTRDAASGSNAPDDASLVQRARKSVAQWKDVTTKHASQSQKLEGVLSSP* # ORIGINAL: g9372.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 4447 9787 . + . ID=g9372;Name=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 4447 9787 . + . ID=g9372.t1;Parent=g9372;Name=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 4447 4590 . + . ID=g9372.t1.exon1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 4447 4590 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 4749 5692 . + . ID=g9372.t1.exon2;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 4749 5692 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 6693 7064 . + . ID=g9372.t1.exon3;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 6693 7064 . + 1 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 7171 7283 . + . ID=g9372.t1.exon4;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 7171 7283 . + 1 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 7423 7589 . + . ID=g9372.t1.exon5;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 7423 7589 . + 2 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 7884 7990 . + . ID=g9372.t1.exon6;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 7884 7990 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 8118 8334 . + . ID=g9372.t1.exon7;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 8118 8334 . + 1 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 8566 8626 . + . ID=g9372.t1.exon8;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 8566 8626 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 8734 8873 . + . ID=g9372.t1.exon9;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 8734 8873 . + 2 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 9054 9139 . + . ID=g9372.t1.exon10;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 9054 9139 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 9259 9343 . + . ID=g9372.t1.exon11;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 9259 9343 . + 1 ID=cds.g9372.t1;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 9626 9787 . + . ID=g9372.t1.exon12;Parent=g9372.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 9626 9787 . + 0 ID=cds.g9372.t1;Parent=g9372.t1 #PROT g9372.t1 g9372 MFREFHSWNGDAAPPDPANAASNLASSAEDVVIEDLEDIRLVLCKLRKDDLDGTSLRTYSMPVCVSELAKSARMSAARKFFRGPTLELPSSDWTALIPAIPRGAMGSMIEASILAQIAAQGVTIDWITSGCATRQEFYSICNLIPSAPTEACLYVPMSSNFEWIDAVLMLPSDGISYFVRSSATESTSSVAFTRNETKSELGGSEANEGRDTKSSKSTSKRGRNTRGQRARQRPSESADSHDKVKDGLFTNRPSVNGEPRGGVRRRSQPGSSGHREDSREVASSRLSGRSTIGSDTLVSPALAAMSDSIESPSGIRAFAIQVTIGSPAAHQKTLNFFLHNRHVEWAAKFPGTQLEWHLVWITTPILPHKPPRELRFDDASVAFQSKSTMELVRALFVFKMCSWKWLVQNSETILGVSRRVLGTRLTMYGIKKTFFAHFCAGEDGSEIAPVLNRLASSGIGSILDYAAENDVEADNVKHAREGVYSARVYDYLGEAECEKNADTFLKCIDAARQSPGGFVAIKVTALGKPVLLEKMTTILLAVRRMFHVQFNKTNKQTISPNNFTEGLERMGVKLTNEQVQSLFEKFDSERDKEIDYLEWTESLRIEDLKNFSIITKGGMLPLLDADETRLMDNMIDRLTRIASAAADAKVRLMIDAEQTYLQAAIDHMARMLQRQHNKSFPVIFNTYQCYLTWSKKRLLNDLERAKREGWIFAAKLVRGAYMVLERKRATDRGYDDPIFTTIADTHSNFNDCVEIVLRNIERSNVLIASHNQQSMQLATSLMAQYKVDPLDGGVYFGQLLGMADHITFTLGANGYRAFKYVPYGPVEYVIPYLIRRAQENADIMKKAGDEIAMLKAELWQRIKPF* # ORIGINAL: g9373.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 9983 14355 . - . ID=g9373;Name=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 9983 14355 . - . ID=g9373.t1;Parent=g9373;Name=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 14228 14355 . - . ID=g9373.t1.exon1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 14228 14355 . - 0 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 13649 14114 . - . ID=g9373.t1.exon2;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 13649 14114 . - 1 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 12950 13362 . - . ID=g9373.t1.exon3;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 12950 13362 . - 0 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 11637 12570 . - . ID=g9373.t1.exon4;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 11637 12570 . - 1 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 11247 11341 . - . ID=g9373.t1.exon5;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 11247 11341 . - 0 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 10424 10541 . - . ID=g9373.t1.exon6;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 10424 10541 . - 1 ID=cds.g9373.t1;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 9983 10048 . - . ID=g9373.t1.exon7;Parent=g9373.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 9983 10048 . - 0 ID=cds.g9373.t1;Parent=g9373.t1 #PROT g9373.t1 g9373 MQSVSGARQAAAGQRTTGHKCIHDKITKETKIWHSSVEYADHPAHGRQNKLKNVIITRAVDFLNKALKVIPVQGNLQLKRQCYAWCSSGGIIKCTDYDGDMTCGSVTVPNAHIAPAGLFRGSGCTLTGPAVAQPSGPGVPSADYVLYVTANSDNCGGDINAFASYCAMDSLTDRPIAGAVPVTPEYVFGRVQPPLIIGPDRQFYTAIHEITHAIGFSSSAWPYFRDETGQPLTVRDSNGRPLKYDPSYQNTVKTYADATLGKTVSKFVTKTVKAELARHSGCPTIDGAEIEDEGGSGTAGSHWEERVFFNEYMTGVAKYTAVISALTLAVLEDSNWYKANYTYAHTIPWGRKAGCGFYTQKCLSGSLTSISPASSATAYPRFFRVNEYASSTSSCSLAQLQAAQCTVSCSADAYGVSYCMPPRAGLSDGCPHYYPFDGTNAECAATAGRGWVMAQASGAASYSAACYPMSCVRISGSFVVRFTVGTSSVDCCKDNSVLTTTDGTSIFCPVISDVCTDGDCPTDCGGPANGVCVSGLCRCVDGTSGATCAGGTATVGYNWVVLTYGACSAPCNGGVQSPNTYQCRTFGDAVTSDANCNGITKPTATIECNPMACFWNVATRSNCSATCDVMGTRTLTYSCRKPYNSSEVDETRFCASLLQPPTTESCLGMCTPGSYVFSSQKPCTEGTICVETGVSASGSGYLCLTPTDLYKHEFGEWKVAFEAWKTRECQPSANDSDEP* # ORIGINAL: g9379.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 40999 41493 . + . ID=g9379;Name=g9379.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 40999 41493 . + . ID=g9379.t1;Parent=g9379;Name=g9379.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 40999 41086 . + . ID=g9379.t1.exon1;Parent=g9379.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 40999 41086 . + 0 ID=cds.g9379.t1;Parent=g9379.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 41216 41493 . + . ID=g9379.t1.exon2;Parent=g9379.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 41216 41493 . + 2 ID=cds.g9379.t1;Parent=g9379.t1 #PROT g9379.t1 g9379 MTTVVDTLGKLDARISAVESRVLPCGDAAGAVESDLGTVHMVQSQVAHFIDRPLAVEHLVHSLTHDRQSVCVTALSGMGGVGKTQLAVRVANHETVRRAFPDGVYWKTLGSEAGALRALKV* # ORIGINAL: g9371.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 1732 3423 . + . ID=g9371;Name=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 1732 3423 . + . ID=g9371.t1;Parent=g9371;Name=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 1732 2085 . + . ID=g9371.t1.exon1;Parent=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 1732 2085 . + 0 ID=cds.g9371.t1;Parent=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 2182 2326 . + . ID=g9371.t1.exon2;Parent=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 2182 2326 . + 0 ID=cds.g9371.t1;Parent=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 2432 3423 . + . ID=g9371.t1.exon3;Parent=g9371.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 2432 3423 . + 2 ID=cds.g9371.t1;Parent=g9371.t1 #PROT g9371.t1 g9371 MASAVEREVDNLVCNLVRTFFDKPTPDNLSAVIEGIRGHEGTELRLAEVVSEIYRCALAINPDVAVELIKELCSCETLSTGLDSPHETTDNSVAELASSNRPITRNVIRNILLGHCQKDFDSERFQTSVIEARKKHARLENLPNSHLARLELDVCEGQLTKFFDLLSRLYQENLLSVNIIRSSIYKLLQDDHPSNENVESACTLIFAAGRGIDYPDKSSLLQSFTERLVEILDEGRLRNNAANAVNLLCSLQANGWVVVSRHNHRVGCAILPSTCTCPDVQWITANAIDARTSPRSGKWMLFLTLATVDATWTAIRKLLQVGKLGCSAKVSPISNRQGKCFLLCVYTSDHDDVGDVMRVLLDLRDGLSRTSVGRGVLNYKTDEDTLAGKYKSNAAAVAAGFDRRVETAGKISKYSSPAVRGSAICTRVTLIRNNIGPELKSAIVGERLPLNNTRKKFVLNRSDIQKDAVAASQLPVIGEAEPFVVRIYKLEDGHFI* # ORIGINAL: g9370.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 2 855 . + . ID=g9370;Name=g9370.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 2 855 . + . ID=g9370.t1;Parent=g9370;Name=g9370.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 2 855 . + . ID=g9370.t1.exon1;Parent=g9370.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 2 855 . + 2 ID=cds.g9370.t1;Parent=g9370.t1 #PROT g9370.t1 g9370 DNASPNVHDVVKQVLSALHVQHILTTPYHPEANAPVERFMRTLKTSEATLLAHIQTDWDVLLPYIVFAYNTSPHETTGYSPFFLAHGRNASLPIDRSLQAHASLHDFKPLAPAALHAAQEQHAKQLKSTLEHVNESALSSRTTQQAKTKARRDTTLRDVQFKRADLVWLYIPVRSKPGHSTKFQLAWRGPFSVLKRHPNNVSYDLANCIDPKTFIPIPGMNTAEYTTRRVHRAHVSRMRPYRIREPTPADAPSLPPSILDALETEVPWDLRDVDSTNVSPDPT* # ORIGINAL: g9378.t1 original gene structure, not modified by PASA NODE_91_length_41645_cov_44.2073 AUGUSTUS gene 37386 40982 . + . ID=g9378;Name=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS mRNA 37386 40982 . + . ID=g9378.t1;Parent=g9378;Name=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 37386 38049 . + . ID=g9378.t1.exon1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 37386 38049 . + 0 ID=cds.g9378.t1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 38245 38430 . + . ID=g9378.t1.exon2;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 38245 38430 . + 2 ID=cds.g9378.t1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 38725 38886 . + . ID=g9378.t1.exon3;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 38725 38886 . + 2 ID=cds.g9378.t1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 39442 39530 . + . ID=g9378.t1.exon4;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 39442 39530 . + 2 ID=cds.g9378.t1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 39826 39945 . + . ID=g9378.t1.exon5;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 39826 39945 . + 0 ID=cds.g9378.t1;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS exon 40419 40982 . + . ID=g9378.t1.exon6;Parent=g9378.t1 NODE_91_length_41645_cov_44.2073 AUGUSTUS CDS 40419 40982 . + 0 ID=cds.g9378.t1;Parent=g9378.t1 #PROT g9378.t1 g9378 MDVVNRFVSLDAIQPSLATLYGDRILDGTSQLSGTEHDGHPLSATATATAQASRTTEPLPPVTECVDAHGGSMLMRTPGGQRARDPVMRFARALKHVDAVWAVRDDGQALSPEALFGDRCFLVDVGSALYLQHRPSVQLRRRSQHGTSASTHTTVNAQVPVRLYVQMLWNAGLVGRLDEAWDEWTKAYSWVGECSGKPACVNPRHCVLDETKLLERHRERKGIKAVDRVISPLDAAVHVVSDETMAATDDNGVAVDDPSGALCGAVAFAGGECPSEATLLLEDLNELVDQLGGQELSDHGFLEACDAYDTYDAIAMPPQSFTAQPEGHIASTGSTFVDSPGTALQCDVTWAAYYEVVESFLILKYAELCSPSLSAAVGLSSDYVSGMSALRHHIEESSEGADFAEYLPIHPSEADIERACLRPGSLAFVEGGYVWSAARRSIPTTAFPVVISTRPCLVGRRDLRESGTSCACVALVGQVPIRTCNTARPDDRIYACNVAGGMSEARAIRPGEPLPSRAIAFVGLVLEVPADDQTLPLVLLASGSDASALFVRSSIASQMDLMGSTLSVISLESARAHARLDGLESCGCCCWESR* # PASA_UPDATE: g9375.t1, single gene model update, valid-1, status:[pasa:asmbl_9999,status:12], valid-1 NODE_91_length_41645_cov_44.2073 . gene 19175 21459 . - . ID=g9375;Name=g9375.t1 NODE_91_length_41645_cov_44.2073 . mRNA 19175 21459 . - . ID=g9375.t1;Parent=g9375;Name=g9375.t1 NODE_91_length_41645_cov_44.2073 . exon 20596 21459 . - . ID=g9375.t1.exon1;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . CDS 20596 21459 . - 0 ID=cds.g9375.t1;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . exon 20079 20366 . - . ID=g9375.t1.exon2;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . CDS 20079 20366 . - 0 ID=cds.g9375.t1;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . exon 19175 19642 . - . ID=g9375.t1.exon3;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . CDS 19361 19642 . - 0 ID=cds.g9375.t1;Parent=g9375.t1 NODE_91_length_41645_cov_44.2073 . three_prime_UTR 19175 19360 . - . ID=g9375.t1.utr3p1;Parent=g9375.t1 #PROT g9375.t1 g9375 MSMRTALTAALCRGLRLRAGHTSRIHTTAVSRKQPSDPHNSACCGPAATASQATPNSNPSASATHTTLAQLAAASSVHTPPPVYSTATREALGFDKTIPIERARTPSSFWYNSRDFALLERNRVWGRSWVPVCHSAQLNQPGDYVCGSIAGQPFLVVKPPEGPPAAYYNVCRHHAATLIQSDLGNVGPEACIVCPYHGWTYGLDGRLKKATRIKGITEFSAKTHGLKPIASHQVGPMIFINFDANADDASRAQIERDVAPAFAALNPTGWDGLKFLTRKSYTLNCNWKIFAENYLDGGYHVSYLHGDLFSQLDSSTYRTEVYDKCSIQSVASADPGKKKPAFSAPRQLPNAQAKGEDFVERIGGNAVYAFMYPSLMINRYGDWMDINYALPLTETTCLVIMDYFLSHDAAASKSHDFVEKSLRASHNVQMEDVMICEAVQKGVSSAAYDDHAGRYAPGVEQALYHFHQMLATELERQ* # PASA_UPDATE: g9376.t1, single gene model update, valid-1, status:[pasa:asmbl_10001,status:3], valid-1 NODE_91_length_41645_cov_44.2073 . gene 21783 24979 . - . ID=g9376;Name=g9376.t1 NODE_91_length_41645_cov_44.2073 . mRNA 21783 24979 . - . ID=g9376.t1;Parent=g9376;Name=g9376.t1 NODE_91_length_41645_cov_44.2073 . five_prime_UTR 24899 24979 . - . ID=g9376.t1.utr5p1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . exon 24638 24979 . - . ID=g9376.t1.exon1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . CDS 24638 24898 . - 0 ID=cds.g9376.t1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . exon 24185 24244 . - . ID=g9376.t1.exon2;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . CDS 24185 24244 . - 0 ID=cds.g9376.t1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . exon 22071 24074 . - . ID=g9376.t1.exon3;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . CDS 22071 24074 . - 0 ID=cds.g9376.t1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . exon 21783 21950 . - . ID=g9376.t1.exon4;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . CDS 21828 21950 . - 0 ID=cds.g9376.t1;Parent=g9376.t1 NODE_91_length_41645_cov_44.2073 . three_prime_UTR 21783 21827 . - . ID=g9376.t1.utr3p1;Parent=g9376.t1 #PROT g9376.t1 g9376 MGDEEALRAQFRAMEEQRQRKLSKRLRKDGKGKTSSAALLSGSGASLSGLSPKQRRAEIDDFFQSAAEAEAKLMEAGDYGDDDMGLELDYAIDDSFASRQHSAHTKKARHSQSPEPKQARRPQHPQSTSSTAALAASHAASASAANGINGAAHSHTVSFGGGMQSRGAASTSGAGLHGNVKDSRSFDWGGFSQMREVESENAALLKQLAEKDKQLRRLLQTTALQNSNVAGMALDPDKPAEAKILELAKKNRDLTAALEAERTRAKAMSVKVVDMEKAAAFADTGARRPTQQGASEHGKGGGGVDTGERQQRPVADLEERLRTMKDELAKAQGKSREYREKLEGAKRELKVAHRVLVDEIGDDAVVQRALAGASTEGMGTTGAGGYRGRAQQIIALKDKLSLAQQRIGACMCGVAGGGAHSTAAVNLNASANRSTAGGFGDADVSTAPVAGGVTPAAVASTGRFVEQQKEQLRKVERERKEALERAARECDQLRSELAETRTKYDAVSARCRTLQGEAKESREKIKVLLEKAANDDELIEQMRSAISTQKGRGAANKRIDDEDAKNAVRAEMEIDSLSKALRDAEQQIRRRDDTILRLKQEVQSASVAAQQARAVAVTAGAGASSVTGVSRPESGRSGSRVGSAGSRASLLTQHVGDGVGSVRVPSAAIDSAELKGSLRASQVECERLNELLQLLKARLTDAEKKLADAEGTARVHRHRAAQLEKQLAQSQLGASGASSGGGKSRGPGASVAGDRRQTEMESRLALQEDEITALKSSLHATINSKEEELSMYHRMLSQTRAAFASAMDELRAGVS* # ORIGINAL: g11597.t1 original gene structure, not modified by PASA NODE_2532_length_5990_cov_37.2171 AUGUSTUS gene 1102 5846 . - . ID=g11597;Name=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS mRNA 1102 5846 . - . ID=g11597.t1;Parent=g11597;Name=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 5685 5846 . - . ID=g11597.t1.exon1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 5685 5846 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 5242 5509 . - . ID=g11597.t1.exon2;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 5242 5509 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 4841 5025 . - . ID=g11597.t1.exon3;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 4841 5025 . - 2 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 4519 4639 . - . ID=g11597.t1.exon4;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 4519 4639 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 4014 4096 . - . ID=g11597.t1.exon5;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 4014 4096 . - 2 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 3563 3754 . - . ID=g11597.t1.exon6;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 3563 3754 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 3124 3311 . - . ID=g11597.t1.exon7;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 3124 3311 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 2836 2966 . - . ID=g11597.t1.exon8;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 2836 2966 . - 1 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 2400 2587 . - . ID=g11597.t1.exon9;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 2400 2587 . - 2 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 1997 2210 . - . ID=g11597.t1.exon10;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 1997 2210 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 1524 1705 . - . ID=g11597.t1.exon11;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 1524 1705 . - 2 ID=cds.g11597.t1;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS exon 1102 1257 . - . ID=g11597.t1.exon12;Parent=g11597.t1 NODE_2532_length_5990_cov_37.2171 AUGUSTUS CDS 1102 1257 . - 0 ID=cds.g11597.t1;Parent=g11597.t1 #PROT g11597.t1 g11597 MATAGNDGGIALWDLGRRQLSTVMRGAHRGGIHGLQFLQSQPLLLTAGSDNALKLWIFDNADGTGRLLRSRCGHSAPPSRVRHYGPTGHELLTTGIDRTLRFLSVIADHQSRELSQGSVESRSKKLGVASEELLLPPVTDFAAETLRQRDWDNIVTCHNGEVGVRTWNFENKALGKHVLAPPGANRGTSMNAAVSNAHLNGAKGKAVAMSPCGNFAIVGLSTGRLDKYNVQSGLHRGTFGERGSLAHAAAVTGIAVDATDSFVVSASLDGSIKFWDFQTLSPIATVVVGSALTQLCMHREASMIAVGGDDFSVRIIDADTHRVVRVFAGHRARITDLAFSPDGRWLVSSSMDATVRVWDLPTGRMIDAFSVHAAVTSVSFSPTGDFLATTHVDSLGVYLWANRSMFAGVVLRPIAADFQPTLVSMPTTASGAEHQGNDDDDNDAMDFVVDRTANGADGSTSAPAPTANEVDTTAFKSVDQIAESLITLSDVPRSRWQNLFNLELIKQRNKPKEAPTAPKAAPFFMPTLPGLAPKFSFEDDLAQQNEKNKGSRLVRLAGLNAQSDFARALDRSARSGDYTQAMAVIKELPPAAVDFEFRSLSPAEDYRQYAQLLDMLQSQLTARSNFELVQAYLSLFLRLHGDVVVSNAALQERCRALLVDGREAWTQVAELFQQSLCMVQFFRGGPTGM* # ORIGINAL: g10411.t1 original gene structure, not modified by PASA NODE_837_length_17100_cov_40.4122 AUGUSTUS gene 3889 9159 . + . ID=g10411;Name=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS mRNA 3889 9159 . + . ID=g10411.t1;Parent=g10411;Name=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 3889 4534 . + . ID=g10411.t1.exon1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 3889 4534 . + 0 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 4883 5026 . + . ID=g10411.t1.exon2;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 4883 5026 . + 2 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 5393 5562 . + . ID=g10411.t1.exon3;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 5393 5562 . + 2 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 5899 6168 . + . ID=g10411.t1.exon4;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 5899 6168 . + 0 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 6360 6539 . + . ID=g10411.t1.exon5;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 6360 6539 . + 0 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 6962 7268 . + . ID=g10411.t1.exon6;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 6962 7268 . + 0 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 7575 7664 . + . ID=g10411.t1.exon7;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 7575 7664 . + 2 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 7923 8047 . + . ID=g10411.t1.exon8;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 7923 8047 . + 2 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 8416 8501 . + . ID=g10411.t1.exon9;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 8416 8501 . + 0 ID=cds.g10411.t1;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 8733 9159 . + . ID=g10411.t1.exon10;Parent=g10411.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 8733 9159 . + 1 ID=cds.g10411.t1;Parent=g10411.t1 #PROT g10411.t1 g10411 MDEIRRLQAEFERAQKAESVNRLSERNCVELVTKLMQLGLIDVVFTTDGKEYVTPKQLEKEIRDEIFVHGGRLNLVDLPPLIGVDVAHIEARVADIVRSDGRTVLLAGEIIEPYYVDGIAEEINESLQEHGQLNIAELCKRFGLPVDFMQSVVIEPRLGSVIQGRMDSVRKGMLFTDAFVARQTAGIRGVLSGITQPVQLGSIVYEWKFEENIFYDVVNRLLDSGRLCGMLQGRMDKATYVPDVYSKTQRAYIDTFYRQNGYLEFDVLRRIDIPDAKAFIKKTIPDAMVLKTAVASPALLAQVDAAIDETFASGSFFDIATIVPSPFTDEDTALLVQECPILRSSSPSAPANSTRTEPTEATPAITGGRIVLEHYAVSAAFVDACLKQLVPIVREQAAEYARTAGAALSQTVQTPKQPEEGKKDAKNKRGARTNKGKKGRDNDSDDDDDASKRQKGRHGESEGGSGKQGEKGNSSAGFFASKNAQLSEHLRKAHPDADAEMLDAIAEVIRRPLADVAAEAQRAVILAAAAGTEGQSNTAGEKRQQREERADQITSLVLCAKISMRAARDVVGETGDTTQYDKHLLRTVCTDAFCKLLVDQAADAGEQFDAAKLVNSPDARTALIKRLPASVAKALSAANALLSSTVDGFLTVFEETLEACGIHLKKVDKKKERAYVQSIKESLLSQLHTEQDPARTLHIVAVLLFIKVNSGDMSLDCPGRCIPQVISYISSRVEKNRSTQENAAVIKSTLSEFQAGVIALAKAQQSRDAGKAGDASLGGGDASDALRDRLPVLKGLVNGDALATSTPTAAVAAE* # PASA_UPDATE: g10414.t1, single gene model update, valid-1, status:[pasa:asmbl_9615,status:12], valid-1 NODE_837_length_17100_cov_40.4122 . gene 14685 16715 . + . ID=g10414;Name=g10414.t1 NODE_837_length_17100_cov_40.4122 . mRNA 14685 16715 . + . ID=g10414.t1;Parent=g10414;Name=g10414.t1 NODE_837_length_17100_cov_40.4122 . exon 14685 15362 . + . ID=g10414.t1.exon1;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . CDS 14685 15362 . + 0 ID=cds.g10414.t1;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . exon 15582 15894 . + . ID=g10414.t1.exon2;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . CDS 15582 15894 . + 0 ID=cds.g10414.t1;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . exon 16262 16353 . + . ID=g10414.t1.exon3;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . CDS 16262 16353 . + 2 ID=cds.g10414.t1;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . exon 16641 16715 . + . ID=g10414.t1.exon4;Parent=g10414.t1 NODE_837_length_17100_cov_40.4122 . CDS 16641 16715 . + 0 ID=cds.g10414.t1;Parent=g10414.t1 #PROT g10414.t1 g10414 MVVTKNADALVITREEDVACRSISPMGLGLALQLARDDTSPEPHSDLDSPPPVKDKSRALFVTGSAPSSGECNEIPSETAINVVSGLVVDIVDASVTATVSPHVEFSHAHARSSPIPPPPSSLASVSNALLESAEAHLTGCVAPGDLLVVPVPPSSPSTTGGNLSSDAITSSPDAQYVAEVFENQRYNPPGTDSASGAAAGGLGFMRGWRLMGGGWTVRPTYSNEKGDVAYEMLPAFVESHYVVDREFGDTDADGWEYAPDFAAGVFHKSPDKYDKVRRRCWLRRESLGLVTPLTDLAPHSPGVGVDSACAADASLGALCTLPNETIAFIAACVTWVTPGGQRVEGKLVITTMRLRFFVGKSSDLSTPLLESMLGMIAAIDKIDR* # PASA_UPDATE: g10412.t1, single gene model update, valid-1, status:[pasa:asmbl_9612,status:3], valid-1 NODE_837_length_17100_cov_40.4122 . gene 9524 11545 . - . ID=g10412;Name=g10412.t1 NODE_837_length_17100_cov_40.4122 . mRNA 9524 11545 . - . ID=g10412.t1;Parent=g10412;Name=g10412.t1 NODE_837_length_17100_cov_40.4122 . five_prime_UTR 11496 11545 . - . ID=g10412.t1.utr5p1;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . five_prime_UTR 10968 10972 . - . ID=g10412.t1.utr5p2;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . exon 11496 11545 . - . ID=g10412.t1.exon1;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . exon 10688 10972 . - . ID=g10412.t1.exon2;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . CDS 10688 10967 . - 0 ID=cds.g10412.t1;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . exon 9524 10357 . - . ID=g10412.t1.exon3;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . CDS 9864 10357 . - 2 ID=cds.g10412.t1;Parent=g10412.t1 NODE_837_length_17100_cov_40.4122 . three_prime_UTR 9524 9863 . - . ID=g10412.t1.utr3p1;Parent=g10412.t1 #PROT g10412.t1 g10412 MGRVIRAQRKGAGSVFRAHVKHRKGAAKFRTLDFSERHGYLKGIVKEVIHDPGRGAPLARVQFHDPYRYKLKTETFICAEGVYTGQFLYVGKKATLSVGNVLPLESMPEGTIICNVEEKVGDRGSIARTSGNYATVVSHNPDENKTRLKLPSGAKKVVSSACRAMVGIIAGGGRIDKPMLKAGNAYHKYKAKRHEWPKVRGVAMNPVEHPHGGGNHQHIGKPSTIRRDASAGRKVGLIAARRTGRIRGGLKGGKQDA* # PASA_UPDATE: g10410.t1, single gene model update, valid-1, status:[pasa:asmbl_9614,status:12], valid-1 NODE_837_length_17100_cov_40.4122 . gene 132 2628 . + . ID=g10410;Name=g10410.t1 NODE_837_length_17100_cov_40.4122 . mRNA 132 2628 . + . ID=g10410.t1;Parent=g10410;Name=g10410.t1 NODE_837_length_17100_cov_40.4122 . five_prime_UTR 132 133 . + . ID=g10410.t1.utr5p1;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . exon 132 218 . + . ID=g10410.t1.exon1;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . CDS 134 218 . + 0 ID=cds.g10410.t1;Parent=g10410.t1;5_prime_partial=true NODE_837_length_17100_cov_40.4122 . exon 531 2066 . + . ID=g10410.t1.exon2;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . CDS 531 1912 . + 2 ID=cds.g10410.t1;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . exon 2314 2628 . + . ID=g10410.t1.exon3;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . three_prime_UTR 1913 2066 . + . ID=g10410.t1.utr3p1;Parent=g10410.t1 NODE_837_length_17100_cov_40.4122 . three_prime_UTR 2314 2628 . + . ID=g10410.t1.utr3p2;Parent=g10410.t1 #PROT g10410.t1 g10410 FEVPDLNPVDRKLSGFDITFTQRHVGIPDISSFYSRFYDANSYPVDVVAPRDSLTGGLRDAAVSGPSQQDGEHDEEADGAHQRGRQFSERVERMLHRLCERARQRVKLKRVQKAAQDIYETVNRKQMGYKKALANARNDETADDSGEESDAYSDISDGLETPRGERGGRNKEKVAPGQPKLNLGRAYDDDADSFAGSIKRLNKATFNGPHVERVIARPQYTRAIAYPVTDEIGFRPPGEYYAAVERTILLKLQQAGAQPPQPVARFDTRKRPPVLLDRRGSRAVALPPSMLIGERRGSRMFSFGTGGPNMARRQSAMLAPILSSNTATSPMSSSTTQYAQLQTSSTIATPSFLARDNMPAIVTLPPSFSATATSSTVIRRTSDAMINSQNAGIGTGAPSIRERRVSRATLVAFERKMSKSYQTLFDAPAMLYQGQTQATAAGGGGDDEVAADSALGEGIPMPGLFNELVGDGSAMAAAAELEAAKAGD* # ORIGINAL: g10413.t1 original gene structure, not modified by PASA NODE_837_length_17100_cov_40.4122 AUGUSTUS gene 11998 13800 . + . ID=g10413;Name=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS mRNA 11998 13800 . + . ID=g10413.t1;Parent=g10413;Name=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 11998 12185 . + . ID=g10413.t1.exon1;Parent=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 11998 12185 . + 0 ID=cds.g10413.t1;Parent=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 12721 12792 . + . ID=g10413.t1.exon2;Parent=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 12721 12792 . + 1 ID=cds.g10413.t1;Parent=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS exon 13191 13800 . + . ID=g10413.t1.exon3;Parent=g10413.t1 NODE_837_length_17100_cov_40.4122 AUGUSTUS CDS 13191 13800 . + 1 ID=cds.g10413.t1;Parent=g10413.t1 #PROT g10413.t1 g10413 MSEEDSSEGSLLAAAVAGGSGEAVEPSVEERELIARMLATAVAQDAALPKTCASCDNATPKYRKIRLRIMPLKMQRHVENTSYFDVKAAENIPLSELLASHLEPRQGNAADRQLVHPYAAAHATDASRLRVCMKVEGRPANDNRYLFFDSAFSLDRALPFMLIHEYPTLIVLLPDELARYPEIDPAEHNRESAERGGSNRSGNGDRQGKHAGKRNRDAGDAAADSDSTPSKMARIDASAVDSVGDAGADTTAEVGVGGQSIQHHDDDDGPPLEISRVPTRELDSMDAAV* # PASA_UPDATE: g9817.t1, single gene model update, valid-1, status:[pasa:asmbl_4690,status:12], valid-1 NODE_2635_length_5587_cov_37.0998 . gene 50 4993 . - . ID=g9817;Name=g9817.t1 NODE_2635_length_5587_cov_37.0998 . mRNA 50 4993 . - . ID=g9817.t1;Parent=g9817;Name=g9817.t1 NODE_2635_length_5587_cov_37.0998 . five_prime_UTR 4882 4993 . - . ID=g9817.t1.utr5p1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 4783 4993 . - . ID=g9817.t1.exon1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 4783 4881 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 4026 4181 . - . ID=g9817.t1.exon2;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 4026 4181 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 3482 3565 . - . ID=g9817.t1.exon3;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 3482 3565 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 3235 3332 . - . ID=g9817.t1.exon4;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 3235 3332 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 2661 2834 . - . ID=g9817.t1.exon5;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 2661 2834 . - 1 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 2270 2494 . - . ID=g9817.t1.exon6;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 2270 2494 . - 1 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 1828 1948 . - . ID=g9817.t1.exon7;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 1828 1948 . - 1 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 1384 1518 . - . ID=g9817.t1.exon8;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 1384 1518 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 885 995 . - . ID=g9817.t1.exon9;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 885 995 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 524 597 . - . ID=g9817.t1.exon10;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 524 597 . - 0 ID=cds.g9817.t1;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . exon 50 188 . - . ID=g9817.t1.exon11;Parent=g9817.t1 NODE_2635_length_5587_cov_37.0998 . CDS 50 188 . - 1 ID=cds.g9817.t1;Parent=g9817.t1;3_prime_partial=true #PROT g9817.t1 g9817 MLAQQIFAGDCAVYVLESDPVLHRCVPLLDQLADAATELFKYDVPTSTPGVYGDQVNVTKSSLSDGVSSIIDILNARSIAEQVFEDLERTWYYVLAGGAIAFGLSIFWTFILQVFAACMVWTSIFGSLACFIAVTAYTFVQYRNQKKKFDDRDLDKIDTDRYQEYTFLACAIVAAVISFVLLLVVLFLRTRIRIAVEIVREAGKAVRRMLALVFFPLVTVLLLVALIIWWMWVAIYLATASEATYIYRNTSGTFGTCDPNLNATGTGAACVFDGYKTNTRLRGMQVYHLFGLFWTSNFIIALGQTTIAGAIATYYFQRKNMPFFPILGAMKRTLIYNLGSLAFGSLLIAIVQLIRAIFEYIDKQTKDKQNLVAKFVMCCCRCCLWCLEKFIKLLCKNAYIEIAIYGYSFCTAARTAFKLLARNCLRLVAVDKVGDFLLFLGHVSVVAATGVLSYQFFKTLQNDLNYYMGPVV # ORIGINAL: g4064.t1 original gene structure, not modified by PASA NODE_3185_length_4074_cov_39.0795 AUGUSTUS gene 2682 3995 . - . ID=g4064;Name=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS mRNA 2682 3995 . - . ID=g4064.t1;Parent=g4064;Name=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS exon 3728 3995 . - . ID=g4064.t1.exon1;Parent=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS CDS 3728 3995 . - 0 ID=cds.g4064.t1;Parent=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS exon 3193 3315 . - . ID=g4064.t1.exon2;Parent=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS CDS 3193 3315 . - 2 ID=cds.g4064.t1;Parent=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS exon 2682 2842 . - . ID=g4064.t1.exon3;Parent=g4064.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS CDS 2682 2842 . - 2 ID=cds.g4064.t1;Parent=g4064.t1 #PROT g4064.t1 g4064 MRPVSQPAILTTMDITTDGFGFMLCFGDMAWVPFTYSLQARYLVEHQRNLGNLEVSLIVALYLLGYAIFRGSNNQKNAFRKNPNSPAVSHLKTIKTEAGTQLIVSGWWGVSRHINYFGDWLMSVAWTLPCGFVDFFPFFHITYFAILLLHRDIRDEHKCAHKYGKDWEKYCKIVRWRIIPYIF* # ORIGINAL: g4063.t1 original gene structure, not modified by PASA NODE_3185_length_4074_cov_39.0795 AUGUSTUS gene 465 1398 . - . ID=g4063;Name=g4063.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS mRNA 465 1398 . - . ID=g4063.t1;Parent=g4063;Name=g4063.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS exon 1170 1398 . - . ID=g4063.t1.exon1;Parent=g4063.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS CDS 1170 1398 . - 0 ID=cds.g4063.t1;Parent=g4063.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS exon 465 713 . - . ID=g4063.t1.exon2;Parent=g4063.t1 NODE_3185_length_4074_cov_39.0795 AUGUSTUS CDS 465 713 . - 2 ID=cds.g4063.t1;Parent=g4063.t1 #PROT g4063.t1 g4063 MAVSRPKTSRGMRAGMRGHPITVVVSMCALFVGVSLSASFESTSVRYAVDVKGDVVYTCTASEKFCLQYGVGKTWQEFPFIGELLGVDSASGDLFAEGVSPNSGKYRLSGGSAGQWASITSAEYDNSSKLNTFAAARALPTQPIVAVSSAGTSWKFDSA # ORIGINAL: g3766.t1 original gene structure, not modified by PASA NODE_2144_length_7520_cov_39.8654 AUGUSTUS gene 2703 7450 . + . ID=g3766;Name=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS mRNA 2703 7450 . + . ID=g3766.t1;Parent=g3766;Name=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 2703 2715 . + . ID=g3766.t1.exon1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 2703 2715 . + 0 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 2843 2944 . + . ID=g3766.t1.exon2;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 2843 2944 . + 2 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 3115 4638 . + . ID=g3766.t1.exon3;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 3115 4638 . + 2 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 4796 5216 . + . ID=g3766.t1.exon4;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 4796 5216 . + 2 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 5474 5576 . + . ID=g3766.t1.exon5;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 5474 5576 . + 1 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 5727 6362 . + . ID=g3766.t1.exon6;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 5727 6362 . + 0 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 6495 7089 . + . ID=g3766.t1.exon7;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 6495 7089 . + 0 ID=cds.g3766.t1;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS exon 7306 7450 . + . ID=g3766.t1.exon8;Parent=g3766.t1 NODE_2144_length_7520_cov_39.8654 AUGUSTUS CDS 7306 7450 . + 2 ID=cds.g3766.t1;Parent=g3766.t1 #PROT g3766.t1 g3766 MYESYEVDDAPPPAKRLKLSDDADATPDVNGDSNGDDKGASDSANFAHTIGNALPELDVDEDDEDAGAVGGDQEDGGAAGGDGQNSGFDGLADMEATIGGDGDLTAGDDAGGSGAQQDDAGGSGSGPSFDVAPAEDDGDNEGDNDDGVTPMDTDIAQSNSGTPATFPSTPVQFGALNVESSPAPGAGGIGGNVGVNAAAGAVGVGGLGAAGAAVPPTPTSGPVQAAIAAANALKSNPAVLAQMVRGKGRGRAKAPISMPQSQYAPTGMGALPMPNTGVGVAGMPGMGMGVSGANPRKRPLGGKDAPVTTKAVKAGGTVGASMVPMGMGGMGGMGGMGNIGLGGVGMPNAAAAAAAAAQAKGPKGKDVKQPAGRGRGVAVAAGAAPGPGGMTKQQQQAAMRQAQQGPNALADLAKVGAGGAGNGANAGAVGVQGVQGQGQGQGLTGPGQDPERRRAIQQQLLLLIHSHRCQSAAKGESCGVPHCSTMKNVLAHMASCKAGRACQHPHCGSSRQIISHYSTCKSPQCAICGSMRAPVRQAQQAVNPGQGNNNAVNTGNNGGNAMGMFSMSPVLQGGNLLQQNMQGNALNAIANQLQLNGQMGGQMAQRVGSPGMGAGLPGVNVAGGGANALKLPVTPVLGAGTPVANSNTAAMIGSIPGMPSASATAAAGGDWRKAVQQAHRTKLMQKLLEALRECVDGKTEEQLLHLAQQTENLVYQKANDLESYYQMLAERIYRLKRANEARRAGQPVDAATLNVPSGGMQQQLANAGGANYAMLQHQQQLLLAQRKGVPLAGGANPGVAGGGAVTAAAAGGVAAGQPTAQQLAMLKRQMLLNGANGGQANMAQLAHQMQMQAQAQQQQAKMVAGGGVGAGGAMVGGIGARGGVKKEEGGERKPKMPLSGQEMREVFMPILDSLIRSDDSMYYREPVKENELENYFEVIKNPMDLGTIRKRLNDDYYREALPFILDVRLVFANAHQYNAKKTPAHKMATRLSTAFEEDLRSAMRTLGYCCTLQKMPFSPLTLHCWGKCMSVIPRDTNYHTFENRIHYCEKCFRESPDPIVQDADPTPLPKDKFETKKNDHVDYEPILECDECGRNMHVVCTLHNKHVESPFVCPVCCERQGRSREPVHSAKNLPKTELSTFIETRVNSLLANVDGAGEVFIRVVLCRDKTSEVKPGMRE # PASA_UPDATE: g845.t1, single gene model update, valid-1, status:[pasa:asmbl_4597,status:12], valid-1 # PASA_UPDATE: g845.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4596,status:12], valid-1 NODE_2588_length_5775_cov_40.2607 . gene 141 1822 . - . ID=g845;Name=g845.t1 NODE_2588_length_5775_cov_40.2607 . mRNA 141 1822 . - . ID=g845.t1;Parent=g845;Name=g845.t1 NODE_2588_length_5775_cov_40.2607 . five_prime_UTR 1816 1822 . - . ID=g845.t1.utr5p1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . exon 1694 1822 . - . ID=g845.t1.exon1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . CDS 1694 1815 . - 0 ID=cds.g845.t1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . exon 825 1050 . - . ID=g845.t1.exon2;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . CDS 825 1050 . - 1 ID=cds.g845.t1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . exon 649 691 . - . ID=g845.t1.exon3;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . CDS 649 691 . - 0 ID=cds.g845.t1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . exon 313 506 . - . ID=g845.t1.exon4;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . CDS 313 506 . - 2 ID=cds.g845.t1;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . exon 141 199 . - . ID=g845.t1.exon5;Parent=g845.t1 NODE_2588_length_5775_cov_40.2607 . CDS 141 199 . - 0 ID=cds.g845.t1;Parent=g845.t1;3_prime_partial=true NODE_2588_length_5775_cov_40.2607 . mRNA 141 1638 . - . ID=g845.t1.1.5b6be70b;Parent=g845;Name=g845.t1 NODE_2588_length_5775_cov_40.2607 . five_prime_UTR 1479 1638 . - . ID=g845.t1.1.5b6be70b.utr5p1;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . five_prime_UTR 954 1050 . - . ID=g845.t1.1.5b6be70b.utr5p2;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . exon 1479 1638 . - . ID=g845.t1.1.5b6be70b.exon1;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . exon 825 1050 . - . ID=g845.t1.1.5b6be70b.exon2;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . CDS 825 953 . - 0 ID=cds.g845.t1.1.5b6be70b;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . exon 649 691 . - . ID=g845.t1.1.5b6be70b.exon3;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . CDS 649 691 . - 0 ID=cds.g845.t1.1.5b6be70b;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . exon 313 506 . - . ID=g845.t1.1.5b6be70b.exon4;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . CDS 313 506 . - 2 ID=cds.g845.t1.1.5b6be70b;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . exon 141 199 . - . ID=g845.t1.1.5b6be70b.exon5;Parent=g845.t1.1.5b6be70b NODE_2588_length_5775_cov_40.2607 . CDS 141 199 . - 0 ID=cds.g845.t1.1.5b6be70b;Parent=g845.t1.1.5b6be70b;3_prime_partial=true #PROT g845.t1 g845 MPQCVTNSFTPSPFMSTGSKGFTKRPYAVALACLFVAIVYSSGGRILFSARRPLSHRGVTADNLPPCSVSANAMVSRDTCEEIRARLSAQSQVAREQGSILTFQTTPVTIEDAGVKFAIRLATALSKKPQGEKDRTSDPFMPPYDTDMYVMDLSPKHVLLLNKFNIVENHALVVTRAFEQQTDPLNRDDFEELWKVVVSLDGLGFFNCGPLSGA #PROT g845.t1.1.5b6be70b g845 MVSRDTCEEIRARLSAQSQVAREQGSILTFQTTPVTIEDAGVKFAIRLATALSKKPQGEKDRTSDPFMPPYDTDMYVMDLSPKHVLLLNKFNIVENHALVVTRAFEQQTDPLNRDDFEELWKVVVSLDGLGFFNCGPLSGA # PASA_UPDATE: g846.t1, single gene model update, valid-1, status:[pasa:asmbl_4598,status:12], valid-1 NODE_2588_length_5775_cov_40.2607 . gene 1958 4409 . + . ID=g846;Name=g846.t1 NODE_2588_length_5775_cov_40.2607 . mRNA 1958 4409 . + . ID=g846.t1;Parent=g846;Name=g846.t1 NODE_2588_length_5775_cov_40.2607 . five_prime_UTR 1958 2129 . + . ID=g846.t1.utr5p1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . exon 1958 2190 . + . ID=g846.t1.exon1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . CDS 2130 2190 . + 0 ID=cds.g846.t1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . exon 2512 2737 . + . ID=g846.t1.exon2;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . CDS 2512 2737 . + 2 ID=cds.g846.t1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . exon 3100 3270 . + . ID=g846.t1.exon3;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . CDS 3100 3270 . + 1 ID=cds.g846.t1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . exon 3540 3826 . + . ID=g846.t1.exon4;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . CDS 3540 3826 . + 1 ID=cds.g846.t1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . exon 4186 4409 . + . ID=g846.t1.exon5;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . CDS 4186 4340 . + 2 ID=cds.g846.t1;Parent=g846.t1 NODE_2588_length_5775_cov_40.2607 . three_prime_UTR 4341 4409 . + . ID=g846.t1.utr3p1;Parent=g846.t1 #PROT g846.t1 g846 MHPSGPVSSLAGHRRNKSLAVDYLGDAPTASAQKGDNTPPRSASVSVGGTGHPQATRSSTSPQPLSPTAARSSAPSIFVHQPLAQTASFPVVPSYSASSLSAAAHSRETRTSSIGHGASIRHDQWTRVSGVIISLFQTTVMIETVELMNDCVTLVMKSEMGHLINEHFKDRLLTKGMIILRETLKDLTGRALLERLSDIWLQYFTIILPQLQAIFCPLQNGNNDIRRLSLGAFRDHVILSSAVRPRFEEALASSQLKPGRIMQMLLVLQGIRLHDENETVIQSIVSASIPYLTPPAGQR* # ORIGINAL: g847.t1 original gene structure, not modified by PASA NODE_2588_length_5775_cov_40.2607 AUGUSTUS gene 4553 5470 . - . ID=g847;Name=g847.t1 NODE_2588_length_5775_cov_40.2607 AUGUSTUS mRNA 4553 5470 . - . ID=g847.t1;Parent=g847;Name=g847.t1 NODE_2588_length_5775_cov_40.2607 AUGUSTUS exon 5379 5470 . - . ID=g847.t1.exon1;Parent=g847.t1 NODE_2588_length_5775_cov_40.2607 AUGUSTUS CDS 5379 5470 . - 0 ID=cds.g847.t1;Parent=g847.t1 NODE_2588_length_5775_cov_40.2607 AUGUSTUS exon 4553 5186 . - . ID=g847.t1.exon2;Parent=g847.t1 NODE_2588_length_5775_cov_40.2607 AUGUSTUS CDS 4553 5186 . - 1 ID=cds.g847.t1;Parent=g847.t1 #PROT g847.t1 g847 MKQHSHYPELLKDMGSKRILDVGCCTGTDIRQLIADGARQENLVGIDVSRRFMDLGYELFGDANRLTSRFVEINIIDPRWDDQAAFDANVTQSLGAPFDCVFAGSVLHLLGEEDVVRMCRACMRLTRPGGVFVGRNVGNTSHAARWEPTPEMVSLMASHDDAETAARVVANEERLKKERERHQLQFLHTAETLQRVLLQVGFLSADVRVAQRMDMPQTMGEWRGSEERCFLEFVATRGPAN* # PASA_UPDATE: g947.t1, single gene model update, valid-1, status:[pasa:asmbl_2828,status:12], valid-1 NODE_185_length_32925_cov_43.7039 . gene 28917 30816 . - . ID=g947;Name=g947.t1 NODE_185_length_32925_cov_43.7039 . mRNA 28917 30816 . - . ID=g947.t1;Parent=g947;Name=g947.t1 NODE_185_length_32925_cov_43.7039 . exon 30623 30816 . - . ID=g947.t1.exon1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . CDS 30623 30816 . - 0 ID=cds.g947.t1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . exon 30304 30448 . - . ID=g947.t1.exon2;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . CDS 30304 30448 . - 1 ID=cds.g947.t1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . exon 30018 30154 . - . ID=g947.t1.exon3;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . CDS 30018 30154 . - 0 ID=cds.g947.t1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . exon 29504 29579 . - . ID=g947.t1.exon4;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . CDS 29504 29579 . - 1 ID=cds.g947.t1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . exon 28917 29285 . - . ID=g947.t1.exon5;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . CDS 29139 29285 . - 0 ID=cds.g947.t1;Parent=g947.t1 NODE_185_length_32925_cov_43.7039 . three_prime_UTR 28917 29138 . - . ID=g947.t1.utr3p1;Parent=g947.t1 #PROT g947.t1 g947 MAASKKAIALDEWEKRMAAVKISKTDMNRLVMNYLVIEGYKDAAERFMHESGENPNIDLNSIEDRMRIRASVQKGNIEHAIELVNDLNPEILDTNPRLYFHLQQQRLIELIRQNRMQDALEFAQEEMAPRVEEHPQFLEELERTMALLAFENQKACPVGHLLDASQRQKTASELNAAILTSQAQEREPKLPGLLKMLFWAQSQLDEKVRYPRMTDVASASLENPADAMETSM* # ORIGINAL: g938.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 4217 6599 . - . ID=g938;Name=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 4217 6599 . - . ID=g938.t1;Parent=g938;Name=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 6509 6599 . - . ID=g938.t1.exon1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 6509 6599 . - 0 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 6048 6193 . - . ID=g938.t1.exon2;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 6048 6193 . - 2 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 5758 5886 . - . ID=g938.t1.exon3;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 5758 5886 . - 0 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 5435 5615 . - . ID=g938.t1.exon4;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 5435 5615 . - 0 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 5050 5153 . - . ID=g938.t1.exon5;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 5050 5153 . - 2 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 4547 4729 . - . ID=g938.t1.exon6;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 4547 4729 . - 0 ID=cds.g938.t1;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 4217 4231 . - . ID=g938.t1.exon7;Parent=g938.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 4217 4231 . - 0 ID=cds.g938.t1;Parent=g938.t1 #PROT g938.t1 g938 MFSVTILRDAWDNIDDSLCFLLLECRCHMLFNVHLPKDRVTQQTQGYGFVEFLAEEDADYAIKIMNMIKMFGKPIKVNKASADKKNFDVGANIFIGNLDPEVDEKMLYDTFSAFGVIIQTPKIMRDQETGNSKGFGFVNYASFDASDAAIEAMNGQYLCNRAITISYAYKKDAKGERHGSAAERLLAAQNPMAVHERPHQRFADAPPSAVPVQPPRPILPPQPVMHQPQFSQPQFNQPQFSQPQFNQPQQYGAPQFAHPPFGAGPPPPQMGFPPPQGQAQRL* # ORIGINAL: g943.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 17903 19351 . - . ID=g943;Name=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 17903 19351 . - . ID=g943.t1;Parent=g943;Name=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 19142 19351 . - . ID=g943.t1.exon1;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 19142 19351 . - 0 ID=cds.g943.t1;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 18910 18993 . - . ID=g943.t1.exon2;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 18910 18993 . - 0 ID=cds.g943.t1;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 18165 18746 . - . ID=g943.t1.exon3;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 18165 18746 . - 0 ID=cds.g943.t1;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 17903 18064 . - . ID=g943.t1.exon4;Parent=g943.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 17903 18064 . - 0 ID=cds.g943.t1;Parent=g943.t1 #PROT g943.t1 g943 MGAHAPAAPNSWKLDKYARFVPAATESDPLGHVSSRAFAESQMPMTQAHDDVQGHATATVGVRSATGEWKHMASPFEDVWLTVTDVGYLMVASGNMLLDVVTFYFRDGQDVRRARIKFAHPSHSSASGRATAAPQTRCVTNEFVASLARFIDISAVVRRIPDPAGETGPAQRPPQPVSQPAAPNGHADSHPAARGSDSVAQVDTAQPQNARASRGDGVLELAAQQHGPVHPHPAAAAVVQTAPLQSQPRQSAAPPVRTVLTPTALTLTALTPTALHTRGVFNDGMTIRATAQALLNGSMPHTLSDDGDEPGLSAFIRQCLADETFPEFVCSVERQLRRILQQADV* # ORIGINAL: g948.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 31343 32454 . - . ID=g948;Name=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 31343 32454 . - . ID=g948.t1;Parent=g948;Name=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 32407 32454 . - . ID=g948.t1.exon1;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 32407 32454 . - 0 ID=cds.g948.t1;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 32135 32251 . - . ID=g948.t1.exon2;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 32135 32251 . - 0 ID=cds.g948.t1;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 31946 32016 . - . ID=g948.t1.exon3;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 31946 32016 . - 0 ID=cds.g948.t1;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 31603 31814 . - . ID=g948.t1.exon4;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 31603 31814 . - 1 ID=cds.g948.t1;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 31343 31419 . - . ID=g948.t1.exon5;Parent=g948.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 31343 31419 . - 2 ID=cds.g948.t1;Parent=g948.t1 #PROT g948.t1 g948 MSDDLIKQIEEALGKQTGLGESKPVAVTASGAPADLYDATKYENNEEIERAWAMKAFKHAETYFGIIQKVNPKILKLTPIDDEIYDTFRESFPNLTIANIPERLLKAPDAKEKWREFCNKFEKKVEDFNFGTLLRLDAAQEYSEENTIFVTRIQFYAIEIARNREGINNVHFNS* # ORIGINAL: g945.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 22361 26336 . + . ID=g945;Name=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 22361 26336 . + . ID=g945.t1;Parent=g945;Name=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 22361 22594 . + . ID=g945.t1.exon1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 22361 22594 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 22698 22771 . + . ID=g945.t1.exon2;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 22698 22771 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 22880 22961 . + . ID=g945.t1.exon3;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 22880 22961 . + 1 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 23047 23274 . + . ID=g945.t1.exon4;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 23047 23274 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 23471 23587 . + . ID=g945.t1.exon5;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 23471 23587 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 23946 23988 . + . ID=g945.t1.exon6;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 23946 23988 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 24105 24197 . + . ID=g945.t1.exon7;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 24105 24197 . + 2 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 24556 24684 . + . ID=g945.t1.exon8;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 24556 24684 . + 2 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 24870 24948 . + . ID=g945.t1.exon9;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 24870 24948 . + 2 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 25186 25317 . + . ID=g945.t1.exon10;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 25186 25317 . + 1 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 25475 25598 . + . ID=g945.t1.exon11;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 25475 25598 . + 1 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 25825 25998 . + . ID=g945.t1.exon12;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 25825 25998 . + 0 ID=cds.g945.t1;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 26139 26336 . + . ID=g945.t1.exon13;Parent=g945.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 26139 26336 . + 0 ID=cds.g945.t1;Parent=g945.t1 #PROT g945.t1 g945 MMHDHDDPVEVTVPTLFRNPSFHSHQEAGHQTMAGCTGRQHIVQFANIHHEFKLPELVAVSAFVNAGLTYNVADYAVEYPFLIVKFANPSAIPAILERTILVKSIYELWGHGDTMEELHAALRAYPAEWLMPHVKSQTPFKYLVETYGKKSTLKRNISLIEGFSYMAFEGPIDLQQPQRTYVLLEYFGDDPSEIPELPLHLYFGMFVGQSRRGDTLDKYDLKKRRFIATTSMDAELSFIMANMAMARPGTFIFDPFVGTGSLLVPCAVRGAMVLGSDINPIVLRGKGIGTTEVWMRDNFVQYGILDKFVGILASDNSHIPWRLEEFFHAIVADPPYGIREGARKIGVKEGRELKKIPDHLRANHIPQSKPYELADVLGDLLDFSAKFLQMGGRLVYWMPCFRPDYDDSHVPQHPSLRLVSNCEQKLSGFVLSRRLITMEKIAPYQAHSLANDTVLFTALSNLRNKVMACHEEERPEAYNKRKERRSEATVRWKGDNPEEYERQMEYRRNVSAVGIAKRIEREHMRARGELVGRGTAKELCARSASSAASSAPPCEQLQQDAAADAHTA* # ORIGINAL: g939.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 7130 8423 . + . ID=g939;Name=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 7130 8423 . + . ID=g939.t1;Parent=g939;Name=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 7130 7195 . + . ID=g939.t1.exon1;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 7130 7195 . + 0 ID=cds.g939.t1;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 7585 7794 . + . ID=g939.t1.exon2;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 7585 7794 . + 0 ID=cds.g939.t1;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 7945 8094 . + . ID=g939.t1.exon3;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 7945 8094 . + 0 ID=cds.g939.t1;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 8190 8423 . + . ID=g939.t1.exon4;Parent=g939.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 8190 8423 . + 0 ID=cds.g939.t1;Parent=g939.t1 #PROT g939.t1 g939 MVASPLVKRRSAPAETSSAGGSVQQQIDVIEGVDNGFLATVAKRTSVLVALLLTQSLSSMILERYEVLLASHMIVTLFLTMLVGAGGNAGNQSAVNVIRGLATGAIGRGNTFQLVVSEFATGVVMATLMCMAAFVRVIYSQKDEDPRAGYAIVFSLFVIVVASVVLGTLLPLLFAGVGLDPAHAGPAIQVVMDILGVGITCLTCFWVLMTSDGSTVKNE* # PASA_UPDATE: g937.t1, single gene model update, valid-1, status:[pasa:asmbl_2831,status:3], valid-1 NODE_185_length_32925_cov_43.7039 . gene 2615 3677 . + . ID=g937;Name=g937.t1 NODE_185_length_32925_cov_43.7039 . mRNA 2615 3677 . + . ID=g937.t1;Parent=g937;Name=g937.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 2615 2664 . + . ID=g937.t1.utr5p1;Parent=g937.t1 NODE_185_length_32925_cov_43.7039 . exon 2615 3677 . + . ID=g937.t1.exon1;Parent=g937.t1 NODE_185_length_32925_cov_43.7039 . CDS 2665 3423 . + 0 ID=cds.g937.t1;Parent=g937.t1 NODE_185_length_32925_cov_43.7039 . three_prime_UTR 3424 3677 . + . ID=g937.t1.utr3p1;Parent=g937.t1 #PROT g937.t1 g937 MLPPLVKTPGNSSPRGSKNADLEMTTVLVSTNGRVSPIQSHVGQNDTAAVNAVTMPQLVPLSPTLETAQQRRSLEAQLAATSITIQQTRSYPGPADAASTEFRGRRASISVGNAGLLPVAARARRWTLGASDSVPIIIPNLPPESLSPSAGPQNTSPTQSTTGISAASTRSLLMSDSAKSLTLKSPANRRKSCAGELLYKCDKIRDSEKGMIGLMGEIETIVEKMGSQLQQQTEMAEFEAKLAKLSGIRRAD* # ORIGINAL: g946.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 26688 28894 . + . ID=g946;Name=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 26688 28894 . + . ID=g946.t1;Parent=g946;Name=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 26688 26719 . + . ID=g946.t1.exon1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 26688 26719 . + 0 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 26834 26880 . + . ID=g946.t1.exon2;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 26834 26880 . + 1 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 27060 27268 . + . ID=g946.t1.exon3;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 27060 27268 . + 2 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 27539 27661 . + . ID=g946.t1.exon4;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 27539 27661 . + 0 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 27966 28048 . + . ID=g946.t1.exon5;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 27966 28048 . + 0 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 28185 28321 . + . ID=g946.t1.exon6;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 28185 28321 . + 1 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 28539 28690 . + . ID=g946.t1.exon7;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 28539 28690 . + 2 ID=cds.g946.t1;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 28772 28894 . + . ID=g946.t1.exon8;Parent=g946.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 28772 28894 . + 0 ID=cds.g946.t1;Parent=g946.t1 #PROT g946.t1 g946 MSSLKLSVVKSLWGVDIDADDISQWDAVLSRVARDGFWGVECPVGQFFAFHKNPAVFVSLLAKHGLGFVAQVHTMGYPTPAATVDAHVAWFTERVREARALGACFVNCHGGKDSWPLADSARFHDECIRVASEEGVHVVFETHRQRALFNPWTSRDILNAVPHMRVNADLSHWVCVSERILDAAFDPEWPAILSLVADRAAYVHARIGHPQGPQAADPSAPEYAQELAAHLSWWTSIWRRLDAQPDSFFPRGERRAYVCVEHGPYPYMPSEPRTLKPVGGLDLWDINDFVKRAVETEFAKL* # PASA_UPDATE: g940.t1, single gene model update, valid-1, status:[pasa:asmbl_2829,status:3], valid-1 NODE_185_length_32925_cov_43.7039 . gene 8819 10509 . + . ID=g940;Name=g940.t1 NODE_185_length_32925_cov_43.7039 . mRNA 8819 10509 . + . ID=g940.t1;Parent=g940;Name=g940.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 8819 8877 . + . ID=g940.t1.utr5p1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 8819 9024 . + . ID=g940.t1.exon1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 8878 9024 . + 0 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 9128 9176 . + . ID=g940.t1.exon2;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 9128 9176 . + 0 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 9276 9433 . + . ID=g940.t1.exon3;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 9276 9433 . + 2 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 9547 9849 . + . ID=g940.t1.exon4;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 9547 9849 . + 0 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 9973 10128 . + . ID=g940.t1.exon5;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 9973 10128 . + 0 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . exon 10255 10509 . + . ID=g940.t1.exon6;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . CDS 10255 10350 . + 0 ID=cds.g940.t1;Parent=g940.t1 NODE_185_length_32925_cov_43.7039 . three_prime_UTR 10351 10509 . + . ID=g940.t1.utr3p1;Parent=g940.t1 #PROT g940.t1 g940 MTVKLYGVPYSTCTRRVATFLNEKNVPYELIQVDLTKGEHKLPEFLKLQPFGQIPALVDGDVHVFESRAICHYIEAKYSAGGPVLIPFDDAAKLAAVEQWLNVEVSHYNPPVSEIVAELVWKTMNPDYKPDLEHVAALKKKLEHALDIYEAHLAHNEYLAGAEFSFADLSHLPYGDYLVHAGHGDVFESRPHVKRWWHTIHSRPSFQKAIRPQTSAGVRSAIEKAKAVDSASRPTTPAKVVASSGSRPTTPAKAVAATVPGGSRPTSSAGKPSSRPTTPAKTASGAVPASNSRPSSRTGAAK* # PASA_UPDATE: g942.t1, single gene model update, valid-1, status:[pasa:asmbl_2830,status:3], valid-1 NODE_185_length_32925_cov_43.7039 . gene 14118 17920 . + . ID=g942;Name=g942.t1 NODE_185_length_32925_cov_43.7039 . mRNA 14118 17920 . + . ID=g942.t1;Parent=g942;Name=g942.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 14118 14261 . + . ID=g942.t1.utr5p1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 14118 15605 . + . ID=g942.t1.exon1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 14262 15605 . + 0 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 15747 16065 . + . ID=g942.t1.exon2;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 15747 16065 . + 0 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 16237 16430 . + . ID=g942.t1.exon3;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 16237 16430 . + 2 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 16593 16756 . + . ID=g942.t1.exon4;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 16593 16756 . + 0 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 16936 17024 . + . ID=g942.t1.exon5;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 16936 17024 . + 1 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 17203 17276 . + . ID=g942.t1.exon6;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 17203 17276 . + 2 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . exon 17459 17920 . + . ID=g942.t1.exon7;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . CDS 17459 17650 . + 0 ID=cds.g942.t1;Parent=g942.t1 NODE_185_length_32925_cov_43.7039 . three_prime_UTR 17651 17920 . + . ID=g942.t1.utr3p1;Parent=g942.t1 #PROT g942.t1 g942 MSSLSTAAAQRPLFRGEDNGGGGKPSVASGGVGAAGGGIGRKLSEGRIFPSIFDSNRVSLSPTERGVSVTQSAVPRKVQGLDMQKGSGGASKMESRNTGDYSMSRSASGQIPSQPLSHRQILAVCCTLLDGFNVNATTSEEYVDDFFARKGCPVSDPSDRALVDQIFGGCARHSKILNAAVAGFYSSTGETCLRSERSLYVTLLYLAIFRLDDLGFPHFKKFVKSQDPYRMHRLLAYIFDAKRLERELRDEWSRLYDASYVQANLVQPIMRAIPAATDLISKLEEVLNNGTVGIPSRPAQATTEPKPFKLTRPRPRLIPEPVAIPTMPKARDVPQTTYAGGFEREDLARQKDDNRRKAEELLRESNRRPFECARRTVSEKTKLVRLEIENERLAQLQFDKPKALPLPPPAENAPIKLNTAAILREEVVFRRKEELEARKLAMLESGAQDTSAFEKWQEEQRKQQLARDIEEIERRHLEGLLSYEEAIAARQAVAKGNREVVVAMQSEAERMLDEARKQRELEEEENRRLVELTNQMHLNAVEAKIKVQESKQKIVMEVTRDLEQMKLQAEAEEAAEREKRAELIRQIRALESVPLSKTKFVDLSETSGLGLLSEMSVLELRERIALLKMRIEQDEEAKRKEILQGKQQKEQSLMAKLDKISRHRAEEGRQAAIRNELKKVSTKDELKDKRILELQRKVEQKRTERFRDREKTQQKPQPYRVRSRDFDSAYMEELRYQEMEDSQQRAAKNRMRLTPEMPRLSHTLALTTRDYGAGESPPIGRKHDLIAMAHR* # PASA_UPDATE: g941.t1, single gene model update, valid-1, status:[pasa:asmbl_2826,status:12],[pasa:asmbl_2827,status:12],[pasa:asmbl_2832,status:12], valid-1 NODE_185_length_32925_cov_43.7039 . gene 10668 13329 . - . ID=g941;Name=g941.t1 NODE_185_length_32925_cov_43.7039 . mRNA 10668 13329 . - . ID=g941.t1;Parent=g941;Name=g941.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 13200 13329 . - . ID=g941.t1.utr5p1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 13029 13087 . - . ID=g941.t1.utr5p2;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 12696 12767 . - . ID=g941.t1.utr5p3;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 13200 13329 . - . ID=g941.t1.exon1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 13029 13087 . - . ID=g941.t1.exon2;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 12597 12767 . - . ID=g941.t1.exon3;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . CDS 12597 12695 . - 0 ID=cds.g941.t1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 11671 12448 . - . ID=g941.t1.exon4;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . CDS 11671 12448 . - 0 ID=cds.g941.t1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 11036 11472 . - . ID=g941.t1.exon5;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . CDS 11036 11472 . - 2 ID=cds.g941.t1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 10886 10918 . - . ID=g941.t1.exon6;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . CDS 10886 10918 . - 0 ID=cds.g941.t1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . exon 10668 10776 . - . ID=g941.t1.exon7;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . CDS 10753 10776 . - 0 ID=cds.g941.t1;Parent=g941.t1 NODE_185_length_32925_cov_43.7039 . three_prime_UTR 10668 10752 . - . ID=g941.t1.utr3p1;Parent=g941.t1 #PROT g941.t1 g941 MLTRATEDDLKKDKIARLSERLGRQSLSETDAFEHASTTQTAVIFHGRERSWTAPTGSPELLGVLQLMPSPTSLSPLSVLSSGLQHAHGTPPSALRFGDRSSVATITCSPGFQLPAVHAPAARSISPTASVASSSLMASRSPSRSPMCRGQSPPAIIPRPPPPSAYATGTATRDSPPLEPASPPRKRPKTVRFHRSQSLPAIPTLAFDSVMTCPGSLDSSHTSSGLAALSSALLSPGSGISSGRSAFASTVLGGPSPSHFSVHATAPTTPCPTPRPASPPQETETHRIAHRNALSDPIYLPCGRAGAARRRRASFRGNTRAQLPSSIGGKGPQRHLFSSADDVSSNGDSFTFRSAMFEGGFSAPSFPPSLDFHPRPTLEPISHPRVPTRQVAMQEDDWSTAAMETDDPVRANGRGSHKRLHDGSVRARPSINAARMLQKGSTDETSEDENIRMNSL* # PASA_UPDATE: g936.t1, single gene model update, valid-1, status:[pasa:asmbl_2825,status:12], valid-1 NODE_185_length_32925_cov_43.7039 . gene 72 1816 . - . ID=g936;Name=g936.t1 NODE_185_length_32925_cov_43.7039 . mRNA 72 1816 . - . ID=g936.t1;Parent=g936;Name=g936.t1 NODE_185_length_32925_cov_43.7039 . five_prime_UTR 1563 1816 . - . ID=g936.t1.utr5p1;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . exon 1400 1816 . - . ID=g936.t1.exon1;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . CDS 1400 1562 . - 0 ID=cds.g936.t1;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . exon 1032 1189 . - . ID=g936.t1.exon2;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . CDS 1032 1189 . - 2 ID=cds.g936.t1;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . exon 738 851 . - . ID=g936.t1.exon3;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . CDS 738 851 . - 0 ID=cds.g936.t1;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . exon 72 294 . - . ID=g936.t1.exon4;Parent=g936.t1 NODE_185_length_32925_cov_43.7039 . CDS 72 294 . - 0 ID=cds.g936.t1;Parent=g936.t1;3_prime_partial=true #PROT g936.t1 g936 MAPSGQSGLPGLSTARLISFVVGAVFVLMMLVNVVFILEESRRIGKLGHRGEGKHSGLRSDSGVVSIAVKSSFNHVFVMVDGEYAIHFNDTEEKTRGLHVVVVNEVTGQVMARQLFDTYTDGAEDALGEFLTNVHRDRIVVMAIKDEGSFRLSSEKRQTIGNMLGAQELGDFGWRDHWLLVSKKGRVQPIVEKHSKSPSLKEWGSPLDAQVWISLEHPR # ORIGINAL: g944.t1 original gene structure, not modified by PASA NODE_185_length_32925_cov_43.7039 AUGUSTUS gene 19932 21860 . - . ID=g944;Name=g944.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS mRNA 19932 21860 . - . ID=g944.t1;Parent=g944;Name=g944.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS exon 19932 21860 . - . ID=g944.t1.exon1;Parent=g944.t1 NODE_185_length_32925_cov_43.7039 AUGUSTUS CDS 19932 21860 . - 0 ID=cds.g944.t1;Parent=g944.t1 #PROT g944.t1 g944 MRRRTYVMIGAAACMLIFVLSLKRSPPPPPSLVYEDDVTFQTAVRSTSDGWLYRASGVEAVSDPSVQPRHGAEQRALRWGHLSPREVSVLNPVGPGRLLTFRNACFSGKTLAALSQPVGNASLDEAQHGWWMAWRKAYDEAVAEGNEKKNEELNIGEAVEINGERLDDTVVDADEYVWIDEFVVRGPTAGAEKPRVARVSRSVLDRAAHVTRLHGSAAYFVLGHKMGNLLHMHEHFFAIVNAKIALMKEIGDAGRHTERQGLAREANEVVSKGLFNELDTIITLDAALDPAFPTVFPVLKTFAQPARLVMQSSRDLHADDVFCASLGAFLTRISFTLTPTESASEERESDTGQHRGSKGREEGYAAEDTTAASGATKTIVEANVRHVALILRAHMLFASLRDRRTHDVRSDTGSPGDVGLNTTGARPRIAFADRDKSPRARNPLSLIVRLLDDNYSVRHLAPKNISFVEAVSLVSRSDAVIGVHGSEMMHALYLPPGGSIVLICPFGMALVCSEYYERLAAILRLEYRVVHVRLSDTRWPSLPARQRARQRALVGDFRFLAQQDLVLNTTVVVAAIADAVHSAKDKMDRSSSADCTDGSGLLGCGDNAGAPVVPEGEQMHNANADAVSSSTDNNNGGQWSNN* # PASA_UPDATE: g6350.t1, single gene model update, valid-1, status:[pasa:asmbl_6171,status:12], valid-1 NODE_3519_length_3280_cov_37.2228 . gene 96 2569 . + . ID=g6350;Name=g6350.t1 NODE_3519_length_3280_cov_37.2228 . mRNA 96 2569 . + . ID=g6350.t1;Parent=g6350;Name=g6350.t1 NODE_3519_length_3280_cov_37.2228 . five_prime_UTR 96 97 . + . ID=g6350.t1.utr5p1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . exon 96 222 . + . ID=g6350.t1.exon1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 98 222 . + 0 ID=cds.g6350.t1;Parent=g6350.t1;5_prime_partial=true NODE_3519_length_3280_cov_37.2228 . exon 582 800 . + . ID=g6350.t1.exon2;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 582 800 . + 1 ID=cds.g6350.t1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . exon 936 1047 . + . ID=g6350.t1.exon3;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 936 1047 . + 1 ID=cds.g6350.t1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . exon 1257 1396 . + . ID=g6350.t1.exon4;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 1257 1396 . + 0 ID=cds.g6350.t1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . exon 1701 1861 . + . ID=g6350.t1.exon5;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 1701 1861 . + 1 ID=cds.g6350.t1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . exon 2104 2569 . + . ID=g6350.t1.exon6;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . CDS 2104 2225 . + 2 ID=cds.g6350.t1;Parent=g6350.t1 NODE_3519_length_3280_cov_37.2228 . three_prime_UTR 2226 2569 . + . ID=g6350.t1.utr3p1;Parent=g6350.t1 #PROT g6350.t1 g6350 SDSNQPANAIQLKSRIGHSMLFNPEQRQLYIFAGQRNKDYLSDFYIYNVDSGVVVEMSRDSSKQGGPDAGFTQRATIDTELGEFYVLSGLMREKSTSVETVKNAFWVYNIAKDKWARVYQNENVDQEYWSRMQNVEPCPRFAHQLVYDHKNKVHYLFGGNPGEMGNPKMRLDDFWALRLERPSAENILKRSLFLIRRQKFQEMCKIDSMDALRFLQHDLAATVNHNDASESAEFRHLTSTLFQRKGTAAAQAALENGVDQFSQRTRLYEDLLLFFPESMKQPRGSLVDLLTL* # PASA_UPDATE: g12371.t1, single gene model update, valid-1, status:[pasa:asmbl_6651,status:12],[pasa:asmbl_6652,status:12], valid-1 NODE_3860_length_2610_cov_46.314 . gene 107 2415 . + . ID=g12371;Name=g12371.t1 NODE_3860_length_2610_cov_46.314 . mRNA 107 2415 . + . ID=g12371.t1;Parent=g12371;Name=g12371.t1 NODE_3860_length_2610_cov_46.314 . five_prime_UTR 107 108 . + . ID=g12371.t1.utr5p1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . exon 107 272 . + . ID=g12371.t1.exon1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 109 272 . + 0 ID=cds.g12371.t1;Parent=g12371.t1;5_prime_partial=true NODE_3860_length_2610_cov_46.314 . exon 556 620 . + . ID=g12371.t1.exon2;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 556 620 . + 1 ID=cds.g12371.t1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . exon 886 1208 . + . ID=g12371.t1.exon3;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 886 1208 . + 2 ID=cds.g12371.t1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . exon 1351 1514 . + . ID=g12371.t1.exon4;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 1351 1514 . + 0 ID=cds.g12371.t1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . exon 1632 1847 . + . ID=g12371.t1.exon5;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 1632 1847 . + 1 ID=cds.g12371.t1;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . exon 2022 2415 . + . ID=g12371.t1.exon6;Parent=g12371.t1 NODE_3860_length_2610_cov_46.314 . CDS 2022 2415 . + 1 ID=cds.g12371.t1;Parent=g12371.t1 #PROT g12371.t1 g12371 FSEVRWEDQERIRQGLGLASAAAAAPATVATSDPMDIDDTVPALSVDYAKAARGSCKDCDKKFAKGDVRVGKEEQKGSRKSTVWYHKDCFLAKLSDHVGKHVLTVDSFKGAADLTADDRESLVPAPPTAAPAKAAKAAKSRKRKGGASSPDDDATTKKARVEEPPAAAPTLLDILRLQNQQVWKVRDALQSLLTTSHMRDLLEHNHLDSHGGESALLERLSDAMVFGVPQRHDCGGRFRLAEHGYVCTGHVTDWARCDYETPAPPRNAFKPIKGLFTESEELKGMKFTPRDRVFPPPPAVLPAPAPPSADSVANGKAPASAAAPAPSHGKPLDIFKVVLVGKFTRTIAELKADLKALGATTGNTVTKTTNLCISTAEAVEEEWDKVMDAIEAKVPIVSEAFITKAKDTQSTPYVDEFSLYGRKGRTPARASRCVGLPGGGG* # ORIGINAL: g8289.t1 original gene structure, not modified by PASA NODE_270_length_28624_cov_41.2786 AUGUSTUS gene 26736 28624 . + . ID=g8289;Name=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS mRNA 26736 28624 . + . ID=g8289.t1;Parent=g8289;Name=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 26736 27057 . + . ID=g8289.t1.exon1;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 26736 27057 . + 0 ID=cds.g8289.t1;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 27183 27277 . + . ID=g8289.t1.exon2;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 27183 27277 . + 2 ID=cds.g8289.t1;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 27408 27661 . + . ID=g8289.t1.exon3;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 27408 27661 . + 0 ID=cds.g8289.t1;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 27831 27907 . + . ID=g8289.t1.exon4;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 27831 27907 . + 1 ID=cds.g8289.t1;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 28117 28624 . + . ID=g8289.t1.exon5;Parent=g8289.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 28117 28624 . + 2 ID=cds.g8289.t1;Parent=g8289.t1 #PROT g8289.t1 g8289 MSGDRRQSEYVIELAEASEAAKKEQTSNANGLDSDSKREFSDVDNVRIQVQPDADSHSVTPDGKRSKDDKKAGVKDEGGEDAKKSAKTAVVKPQVPFSELLFRFATPGDKFLMLIGSIGAMGAGAGMPCMTIIFGEMINVFTKYDQGEYDSHEFMNQIRMYTYYFLGLAAITFVCGYLQFALWMISSERQNRRIRIEYVRSILRQDIGWFDGQKSGDLTTRISSDTMLIQDAMGEKVGTAVQHTTTFIAGFVIGFVRGWRLALVLIAVTPLLAGCAAFFGKMLVSLTTKSQEAYANAGSRAEEVISSMRTIAAFSSEDKVCARYGDALKEAHSSGVKKGHVTGAGVAATFFVMFCTYALAFWYGSTQILDGNMTSGTVLNVFFAVLIGAFSLGHAGPPITAISEGRGAAHIVFDTISR # ORIGINAL: g8286.t1 original gene structure, not modified by PASA NODE_270_length_28624_cov_41.2786 AUGUSTUS gene 216 13753 . - . ID=g8286;Name=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS mRNA 216 13753 . - . ID=g8286.t1;Parent=g8286;Name=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 11332 13753 . - . ID=g8286.t1.exon1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 11332 13753 . - 0 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 10815 11215 . - . ID=g8286.t1.exon2;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 10815 11215 . - 2 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 10344 10554 . - . ID=g8286.t1.exon3;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 10344 10554 . - 0 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 9964 10162 . - . ID=g8286.t1.exon4;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 9964 10162 . - 2 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 8861 9736 . - . ID=g8286.t1.exon5;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 8861 9736 . - 1 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 6716 8634 . - . ID=g8286.t1.exon6;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 6716 8634 . - 1 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 6166 6524 . - . ID=g8286.t1.exon7;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 6166 6524 . - 2 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 4287 5963 . - . ID=g8286.t1.exon8;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 4287 5963 . - 0 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 1029 4114 . - . ID=g8286.t1.exon9;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 1029 4114 . - 0 ID=cds.g8286.t1;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 216 805 . - . ID=g8286.t1.exon10;Parent=g8286.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 216 805 . - 1 ID=cds.g8286.t1;Parent=g8286.t1 #PROT g8286.t1 g8286 MAIFKRLGRTLFLGALLLLSGRVDAKPAKRDAFLPLRYQPGTEYVYDYNSESHPTGNEHLVDAEIPISFNAELRIHLVSEDINAGSQLCALEILDLEVATTRSMGQPIDHSVDVSRSFFFRQSSNGAIIAVYYPRDESIDVANMKKGMLSAFVHRVPDADDLTDSSNYETTETDHGGEHMASYSIQVVEGSGAGKTRRSSSEQAIALRKVKGNPDAEYLDYEHEKVVLRKDSVIESIRETELVSFRRDIEIRETRSYEHIRRAGDAAGRETDRRARMAMPVRTPLSGDARLQDSDLPNVYVAFRSSVTVTLDSSHPADDGKVRRSIAAFSDPKALQTLVEDSIANKQNTAPPANQEKEEWWPPIMRSLECMEAYRGSITREAGDCLGALVKAARQLSERDLALLASFVFDDAGNAALPDKGATRKEATMSALAHVGTPFTQDLLVCHGLLSATATERDMEAFSVAVILLRDVSVPTAAAIGAACYPELDFLYGQSLESVRARVSASLRTSLLLAMGTMSGKLYSRDTQSATAIVRHLTAEMNAHRETIRRSARALQQHYETGDLASHPLHLHEAVLLESLGNAAIPHTLTLIAERIHDAEAPNVVRRSSINALRRFEGAAVEDVLATVVGFHADVEMRAMGRKVFASRTRTRTIDDAAHEVLDRHLRGNWSEYNEDYALYGELHDHLYQNVSVTHEQDYAVNSQETVRRKRGSNDADADVGLGGASSRRRRSLNDILDAGISFGLAAPTISYEKGFGNKDIGARAVVLLRNRMSFEASVLKTKLEIDVKNEAFLEIYGFGKSFKFAEGRLNFNAFVGYDLNVMKKLLDLDPSKLIDMLKNMVNEALKQLKDQVTGVYNTITNFGDMAEKFMDLISDFADKDRRDMHVAMYGEEGESPVTVSFEGSSDSTEVLSRGRRGLAGIKLKVAAMLLKFDMLKKLTKAIVKVFKSVISLFKNIKSAYTMIKSAVSKMSDCPISAVISITISAVSVVKAGFSAWVAIMDARTLWGVNGESTFAQRWAQIDSYFAGITEGDPPDDPSVTFTDKIGNGYSAVRDAIWDKLEDASYAVKNFGTIMKNWYAGVIMSIKRLFSTKFNKLFPDQVRSCSSTPESKCCRLNERVTGCCGKCGCTGVYPAGGVVDPSAMSDKDQAIFCGRDLDCPKPGVDLVVRGGQSIVAPFSGIVTRSLLGDAFLGSIQIEGNAGSWKGWVVDILHVDPTGKTETGASDNRNFADVKEGQVIARALDKHAECSVPFIHVSMYKRKDVDARDPNSPDEDVEYVDPTVYLPARYPSFAPVVSENEVFLQFLFFTVVPSKPILDFVGDLADKVKNRGKKARADDDTTNQEDVCSKELTNIPDMCMDTGELQPLFQKTEVVFHVEAVWPVGPLQIGFQLDITATFGIYYGLKVCLLTQSGEGRLAPRLAAGITLSVSVGIALFRGGVRLAGTLMDTMAIGRGLVSFAKIRNVTIVVDLEILPLTLTFSCFLEANGLFKWYNVFSYDIWTFQLAKLKWPAIISMSNVQRDPTGPVIAGPVAVGKPKAVTPRQESQNDLVVEFVADDPETGIKSVEYAVGSSPGGTDVVGYTTVGGASIRAPMLAPNSFTAYISLRVTNQQNTESVVKLGSIFWQLDVPLITVAAANAAQSHPSEMFATYTVTDRATLFSVEWALGTGQEMADVIPWTSVSLDAQTTSVSGSIGSSSLGGRLSHGRTYYFSVRAKSLVGWSAIASAGTLVDFTPPQGDASMIYNGLDVGIHTDYTGLTKSVAASWSPFTDPETHVVSYAWCLSRTECNAGDIMPWRDPFLGKDAASRLVAGASGSAFIHVREFLDDTPLTEGEYFVSVRATNEVGLTTTVCTRAYFIDLTPPMIDNVFATYDEDFVQLTVTWDAWDYASPPVDAFIFGLGYTASDDAVLPLTTYGPQTTSLTIPLAIPSGVRLFPKVVILNRVGLRKFVIAESFIIDVTPPEPGVVRDGDNVNIVRRFQSFADSLSSAWSGFRDLETGIAYYKVVFGTNRGACNPLTFIPLEGDAGNATVTVGSKQTVNASLDHGRTYYSMVLAYNGVKQGQGRVKWVAVCSDGITVDITPPVIPSTVADGPDATGDIKYQPHLSSIEAAWDAPFSDPESDIVLLKASVRDVTTNTTVYLRGMDDEGFVLIPQAATSFANYNLMLVLGRMYVIVLMAENGAGATSTASTNGVIVDNTPPVFTFLGVEGTDPSAGIVFVDPTYPVRLLFAVEDPESGLATVEWMLTLQTGATVIDYTPSTPDVGASESALRSARVVRGSVTCPASSCLRDGMFYAFAVRASNNAGMFSTRTTPNFGLDSTPPVLNSLWDGAGKEDVDLVETSQKALYCQVDASDDESGVIQIGAMLYWGEPSNANAAQLVAAVNVSASLSGRTIVSVPVDGFALVENDKYFFAAYVTNGVGMRSLVALSSGFMIVQQPTAGFVFDGPTFDDAYFQSGKTTITARFSGWVSRIVPITHYLWGVRTKSAPGDTRNVQEYTSAAISIDGQGSGQVQLPLPLMQGEEYQVTVKAIRADEDDTLWAESNGVIVHTRAPTLVSLTDGTARFVSLPELRCDWQYSDTLLGVNDYEYAVGRAPSDSTYFDAVHTVLSSLELTPVSGRKPRAGEAVLFSVRAFGINGLASEWAHTSGVAMDTTVPFTGLVRCPEVLTSDSTPFECSWLGFGDYESTVVSYSLAVGASIGGSEILYVPASSLGVSQRYSVSGLNFTDGHTYYAVVVARNGIGMEQSAVSSGTLVDRTAPLPGRVAKQTNNPALLGAPTDDATCQLSTRFIMTTWEGFSDPDYPGDGIAHYEVSVYGRGPADARSLPITRGPVNVGRSTHASVHFEFDLQVNGTYYVSVTAFNFAGLATTSVSNGVTVVAKGRSIVYSVVWDGSGSVDAQVQTSAEDYACSWYVEDACGVLEYRWALFRGDGIAVTNYTSTALARSASVFGIQLREGARYYASVVVVNNLGLESIVTSDGVIVDSIAPTPGRVFDGPTEGVDISFQGSVSSVAFSWSGFVEPKGRELTYMVAIGTLSQGLVDDTLKWTDVGSATTFKTTFTEKLTALRTYYASVRAVNPAGAVAVATSDGVKVGVGVSPVAGVVSDGASADDVMYQAATDTLWARWSGFFDPFLDIVRFDWGIFTSSAGVNMTSADTIGTAFDVLNYTSAALNSSASLTGLSLKTDGTVYYAVVRATNDAGLSAVSVSSGVIIDPTPPTTGTVRLVTSSGFLQDVLVFGSDPNMVNVSWTGFADPESGITSYRMRVFNTPSYGSPVRTPVSVEATVSGALGGYAVVAPLSGDGLFIVRVVATNGAGLTTTAESEPILVTVTPPTAGRVFDGSVVAALDDEYQSTEKRLRFTVLESNILHDDFCDHRIDDFVLRKGVESWVARGGRRNGGAYEAGRAVMRAEGLMLYAQLLSGAVLTSGMVESAKGASEGVYAVSMRVPGAYGLITSFAVWNSEPNSPGQVDFAPDLANIPYVESRAAQLDYGIGLLFYGNASGGASGNVVAWHANAAKRTVSFTYVKVNFDPSADVHEYQFEVKSLSTYFAVDGIPVQGLTGGPVITAAMIRIHVYTDLLANATLIPDNVQASALVKRIRTPLDSAARILCEFVPFADFRAPIVGYEVGVGTKQGKADVVGFSPIALPGAVYVPCREDWRAVCNESTPMQPHPWEFVLEGLNLPLFQCRDGFRFTDATNATCDDIDECAEGIDDCHSRATCTNTIGEFLCDCKDGLIGNGHGEATGCHSVFSTCTDRDCSCDQGYEGDGVTCNEVDECAVALTQNMTLCDGNATCVNTPGSFRCSCNTGFAGPGFVCFITGTQCAYAQPLSFALPLAPPGSPVMQSASGVLSAQSFAAFDIRCTPSDWNETTQGAIASVGAGYWMTVRGTGFRMTASMCGDGNDAFDSIIHVFP # ORIGINAL: g8287.t1 original gene structure, not modified by PASA NODE_270_length_28624_cov_41.2786 AUGUSTUS gene 14744 19395 . + . ID=g8287;Name=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS mRNA 14744 19395 . + . ID=g8287.t1;Parent=g8287;Name=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 14744 14952 . + . ID=g8287.t1.exon1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 14744 14952 . + 0 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 15141 15234 . + . ID=g8287.t1.exon2;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 15141 15234 . + 1 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 15383 15431 . + . ID=g8287.t1.exon3;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 15383 15431 . + 0 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 15558 15641 . + . ID=g8287.t1.exon4;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 15558 15641 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 15780 15875 . + . ID=g8287.t1.exon5;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 15780 15875 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 16014 16166 . + . ID=g8287.t1.exon6;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 16014 16166 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 16314 16400 . + . ID=g8287.t1.exon7;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 16314 16400 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 16490 16563 . + . ID=g8287.t1.exon8;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 16490 16563 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 16724 16800 . + . ID=g8287.t1.exon9;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 16724 16800 . + 0 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 16958 17105 . + . ID=g8287.t1.exon10;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 16958 17105 . + 1 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 17295 17406 . + . ID=g8287.t1.exon11;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 17295 17406 . + 0 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 17660 17725 . + . ID=g8287.t1.exon12;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 17660 17725 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 17873 17934 . + . ID=g8287.t1.exon13;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 17873 17934 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 18073 18229 . + . ID=g8287.t1.exon14;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 18073 18229 . + 0 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 18380 18472 . + . ID=g8287.t1.exon15;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 18380 18472 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 18706 18925 . + . ID=g8287.t1.exon16;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 18706 18925 . + 2 ID=cds.g8287.t1;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS exon 19176 19395 . + . ID=g8287.t1.exon17;Parent=g8287.t1 NODE_270_length_28624_cov_41.2786 AUGUSTUS CDS 19176 19395 . + 1 ID=cds.g8287.t1;Parent=g8287.t1 #PROT g8287.t1 g8287 MSKVLILCPAFRATDKHNFETRRDFLEELKQPLFTPLRYDISVNEQRSLTVRRLKRLSDLGVSRLLLIQSPSVDEQLKNQAISECLYLYDHSLIVKLGAVWALWGASVKNLGTEVHHAKYLKDIAELRLPGCFALTEFGHGSNVRGIETIATYDPESHEFIINTPTESAQKNWIGGATMAHAATVFAQLHIEGENKGIHAFVVPLRDSNGNVLPHIRIADCGHKMGLNGVDNGRLWFDKVRIPRENLLNRLANVTEDGAYESMIDDPDMRFAASIGELVLGRCGGANQVAKLGLAIAIAYSLERRQFGPPGGPERPIMDYKVHQYRLIPLLATSYALGSAGHSIMKQWVTRSDDISLRVRQMKDIHILASGLKGLAGWHMSKTLQTCREACGGNGVASWNRIGILKADTDVFLTFEGDNNVLLAQNAGQLIREYNRHLKSGFAAGSRLEYLNALIADNPLREPLKARAWDSEKHAFVDVRVDGSHLRSAEFQTRVFEAREADLLQKLSRALADCKAAGMDDEASWNDCGPLAAQCGLAYCERYVLGAFVRDIAADGSAFLQVESHNFSLGAHERAVLDKLRSLFALWRIAYEPSFLSAQILTKTAVAACERECHILMSELRPHLRQLVRAFNIPDHLLAPIATEYETYGTYDRAVNASEYLGRAVY* # PASA_UPDATE: g8288.t1, single gene model update, valid-1, status:[pasa:asmbl_4870,status:12], valid-1 NODE_270_length_28624_cov_41.2786 . gene 19452 25921 . - . ID=g8288;Name=g8288.t1 NODE_270_length_28624_cov_41.2786 . mRNA 19452 25921 . - . ID=g8288.t1;Parent=g8288;Name=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 25801 25921 . - . ID=g8288.t1.exon1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 25801 25921 . - 0 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 25469 25653 . - . ID=g8288.t1.exon2;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 25469 25653 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 25117 25270 . - . ID=g8288.t1.exon3;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 25117 25270 . - 0 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 24562 24876 . - . ID=g8288.t1.exon4;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 24562 24876 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 24017 24317 . - . ID=g8288.t1.exon5;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 24017 24317 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 23576 23852 . - . ID=g8288.t1.exon6;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 23576 23852 . - 1 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 23086 23371 . - . ID=g8288.t1.exon7;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 23086 23371 . - 0 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 22860 22955 . - . ID=g8288.t1.exon8;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 22860 22955 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 22258 22733 . - . ID=g8288.t1.exon9;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 22258 22733 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 21642 21970 . - . ID=g8288.t1.exon10;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 21642 21970 . - 0 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 21204 21487 . - . ID=g8288.t1.exon11;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 21204 21487 . - 1 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 20550 21043 . - . ID=g8288.t1.exon12;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 20550 21043 . - 2 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 20167 20396 . - . ID=g8288.t1.exon13;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 20167 20396 . - 0 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . exon 19452 20046 . - . ID=g8288.t1.exon14;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . CDS 19683 20046 . - 1 ID=cds.g8288.t1;Parent=g8288.t1 NODE_270_length_28624_cov_41.2786 . three_prime_UTR 19452 19682 . - . ID=g8288.t1.utr3p1;Parent=g8288.t1 #PROT g8288.t1 g8288 MTLWIRRQFMALSALIVTLCIVACAKAADDDYGLFVDPETAFALPAFQFELATPKDPDLLMCLWQGSLDSAFPTKLARTKPHRMSTPTKVVCVYVDDVTQEWRNNDYAEIVTVRLTDYDGSLIAIPVDWGYLRLASDKKVLAAANGFVGRLDGGEKRKRCNKPESEKFSWTFQPATAFKELPSGNRWYDSLSQGNLPEDAVDKARNAMDTKSMSDKDKEFCGSEDVGKAMKDILTDFVAKTGLSQNLAASLEMCFLSQCIKKEFTRAACGAFLREASKVGMYDFDVPPNAGQLHVGITKLVTGERIIYESTPGASAATDLEASKAQWKEGFKKKLSRLSGSLQEWLGVGNSQVTSTAHWRACIIESEHCLDKHPLYKAFAPLFLSKNPGDDPPTLLFNSRNPLPIWELFHEGYAMSLSGEVTVWVDGVTVRGDPLPFSYDILDPDATSGMRALLLYNTKVTGINVRIIVDPSGPDLASMCSRFINPLEKMLRMWSYVGCYTRKAFPTLSCVVGELQQVTDSVPRWTQLTQYSRVFIGNGDQKIAQKECKEWFFQRLIALGKGEPTDNTDCLSAPKKMPLISWSINGIGRLRRAGDWTPTWHTLINMVRQSNIVALQGVDGVAAVKDLVAAINYRASDGGVTSGTGGTITKNPKENQERSTYSACVSGDGKLAFIFRADRGFFRIQNSIAYDDYACAHSCKSFDDFVKAKYPNNNNYQDYVNEYGVVKGLVCRFELNPLPSDNFFEAMSREFYIANMDSVQSKSMGQLQNIVDSAHTVLKFALTSSSSDADPSKNPSSSLYQKQFSSNANSKVDYKASLSVDFKTTLARGLFAGTFSFEPTIFQSAYADATKGVNSTLVPPFRQLQKVLFSREGWTGLGRGGLFSADRALAATIVDGARGNNALYRDFAPALTGTNLLEPAPKYCDYIYSLKRPARSAITFGGRDLVVGTWDLGSFDDKRAIALRDIRANDPFRAIIAEFDLLAVQSLNVKGLPASPQDTTPYKKLLDLFTPESYARTERLAFATGEATFADIFKRIENRAPAQWATVRPKLLTQLAGASADGLFLFYNPAIFQDVVCHSVEYLPRDSDGLPTGKPALVCRMVVVAVGSTATTPLTVVNIDAAASADVASALPRIHALANAAFAASDSKYAAAGYSSQLILGAWNLQDSGAGTQFFPVFKSKFATAFAAQFSGSTTHPAGFVASDWAFPDSNTVAPTDIMTELTASGVAFAPASRLASRTIPLSALDLSYAKKRGGGDYILPRGSPPLTASRMPCVLVSDSSPVYVMKDEALYVSIGAGADGAL* # PASA_UPDATE: g7243.t1, single gene model update, valid-1, status:[pasa:asmbl_9068,status:3], valid-1 NODE_725_length_18565_cov_39.7312 . gene 10131 15854 . - . ID=g7243;Name=g7243.t1 NODE_725_length_18565_cov_39.7312 . mRNA 10131 15854 . - . ID=g7243.t1;Parent=g7243;Name=g7243.t1 NODE_725_length_18565_cov_39.7312 . five_prime_UTR 15609 15854 . - . ID=g7243.t1.utr5p1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 15536 15854 . - . ID=g7243.t1.exon1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 15536 15608 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 15085 15182 . - . ID=g7243.t1.exon2;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 15085 15182 . - 2 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 14819 14984 . - . ID=g7243.t1.exon3;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 14819 14984 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 14090 14457 . - . ID=g7243.t1.exon4;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 14090 14457 . - 2 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 13683 13757 . - . ID=g7243.t1.exon5;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 13683 13757 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 13286 13330 . - . ID=g7243.t1.exon6;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 13286 13330 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 12879 13100 . - . ID=g7243.t1.exon7;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 12879 13100 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 12454 12575 . - . ID=g7243.t1.exon8;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 12454 12575 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 11946 12237 . - . ID=g7243.t1.exon9;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 11946 12237 . - 1 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 11180 11838 . - . ID=g7243.t1.exon10;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 11180 11838 . - 0 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . exon 10131 10973 . - . ID=g7243.t1.exon11;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . CDS 10475 10973 . - 1 ID=cds.g7243.t1;Parent=g7243.t1 NODE_725_length_18565_cov_39.7312 . three_prime_UTR 10131 10474 . - . ID=g7243.t1.utr3p1;Parent=g7243.t1 #PROT g7243.t1 g7243 MGISMTTNTFSMRRVLVVLSLLAFGALVHGQGEDCSRWELQRCGACLRETTTCGWCESWASCVPLTEASFCGYGWKYPTGTTATSPATNDTVDGAPVLPLFNPASATLSLRKGITRTVSVTVTPRAMIPLDVYVLVDRTVSMASQLMTLRSLASSIASTVLNSTFASVHIGLGSFAEKPLAPFTDPAYTWPNGGSPASQATFMFRNDAPLADVNASAFGDAFAAMRPIGDYDVPHAGLDAMVQVALCDAKIGWRAGARKVLFVLTNAGYHVAMDGLRAGIELPAAKACAMSANSANIVDRDYPSVEMWRDVMYTSDIVPVFGIARSSMHLDWAYGAKSGLIGRLGRGFVMGLNDDFSDIPSEIAFSLKKIANTVHLYPDPTSAASSYISSIDPPIAHLMDDTGAVVSTAAIVTVSFVTPAHVVSTVTPRLLLAGHPGVFATTISAGYTYTCESCSGLSCPKDCNGRGTCECGRCVNCVGGFDGTECQFLSTSTCSTGAGVACSGHGTCDGYSRCKCDAGWTFQTLEGRVIPQFCDCPVSKCLADANGVECSGNGLCVCGKCRCLPGFDGANCGCETFKQCDVDCSAESDGRAECVCGKCQCKAPWFGDGCARCDPTDAACPYGKKICEAFQSDCGACVSHANGTECHWCGDVQACMPNAVLSTCKAPITPATQSACRCVKGCAHDVFYKYTSDGTVAYADVSKDKTSPGPAVGIAFACCIGAGVIIMLLWRVFVYYQDKEEWERFEFKCLELGVNATIAKDQAAKDRLFAAAAAAAQSYPAKRTDGIRVPVIEAAEKKRKQDEEDAKRNEKDRKKRAEKDAKKKKAAAAASSSVSGVDGPRTTVMEMNVLRQEEDLAAVADIMFANDNLFTM* # ORIGINAL: g7244.t1 original gene structure, not modified by PASA NODE_725_length_18565_cov_39.7312 AUGUSTUS gene 16645 18565 . + . ID=g7244;Name=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS mRNA 16645 18565 . + . ID=g7244.t1;Parent=g7244;Name=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS exon 16645 16859 . + . ID=g7244.t1.exon1;Parent=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS CDS 16645 16859 . + 0 ID=cds.g7244.t1;Parent=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS exon 17235 18241 . + . ID=g7244.t1.exon2;Parent=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS CDS 17235 18241 . + 1 ID=cds.g7244.t1;Parent=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS exon 18450 18565 . + . ID=g7244.t1.exon3;Parent=g7244.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS CDS 18450 18565 . + 2 ID=cds.g7244.t1;Parent=g7244.t1 #PROT g7244.t1 g7244 MRRIRDRMGRRGALMRISALALVISACILASTPSSMALTTSPYFFTDPEFTIAGPALGSGDDFAKSVVVSERTGQYNDETNALVHVAAPRANGGMGSIYSYRIENVIGNAAKFSTLGTFAGVVDRNSSRLTFGGNAGDYFETTPQSSSSPGNTTLFGMTMLVGSLLDGSDGQDFITSSPTLSGPSSSEVLVNATRFLYMQGTCGGSVNGNAAVSASATSSASPSATDGPTATAIATATADGNTSSVSPSASPSGSLPGNGGEIVWAPLVCPSIPNDASVLGQIFASKVDQYSGFPATGAYFSSRAGSTLCRQRPSVAAPIVDCNAQLGASIATGRVRSRHGTPPTSTDPMEIVSGAPLADAAVVYSLSSGGAAGSTTTVAAPLSAEGPDYFGAAVASGKSIDGDGFDDFVVGAPRATDNAAGLAYVGSITGYSGERRPSSPPPLLP # PASA_UPDATE: g7241.t1, single gene model update, valid-1, status:[pasa:asmbl_9069,status:12], valid-1 NODE_725_length_18565_cov_39.7312 . gene 1321 9385 . + . ID=g7241;Name=g7241.t1 NODE_725_length_18565_cov_39.7312 . mRNA 1321 9385 . + . ID=g7241.t1;Parent=g7241;Name=g7241.t1 NODE_725_length_18565_cov_39.7312 . exon 1321 9385 . + . ID=g7241.t1.exon1;Parent=g7241.t1 NODE_725_length_18565_cov_39.7312 . CDS 1321 9111 . + 0 ID=cds.g7241.t1;Parent=g7241.t1 NODE_725_length_18565_cov_39.7312 . three_prime_UTR 9112 9385 . + . ID=g7241.t1.utr3p1;Parent=g7241.t1 #PROT g7241.t1 g7241 MHLRIPIQLKECLMAACENGHADIAKCLLDKGAPVEAAVDPKRKRTPLLAACLNEHVTVAQCLLSRGADMNARDADGWGALHYACLKDHSTRTTQLATALLDAGADVGLCGKSGWTPLHACALTGNVSLVRLVHSRGAFLDAADHAKKTPLHVACERGNVEAAKLLLSLGASAAKTDASGKTPVDVCKDDVRRTLWPAEQSATQSTAAVNQSKGAWNASFTHTPPTPVATGTHGQPARPVASAQTAGAVASSSASAHAHAHMTPQSRPPMQTRAPAHPVTLGVRLPAEGNPMLKHVMCAVTAAIARLQPSQSTGSDDDSSDDSDIEGQDNEAATSKDGTHALFCTMRKKASESVTDEVLSAARSALAGTDVCGIAGMFEVECADTNAANAANAATNAVDVDLVAPALLGSAGLFRLACERVSVRAALPGRPRHDYHPDVVRTVDAFIGLMSGHTAPCDVTAMMRTVALAHAAVDRLLADHVQVMRSNFMHKIPSGCLGDAPVRPPTQQQAPVAANDPGNVIREIVSPAAAVQTIDVSSLALRDIVSVGGYIGIVVGCFVDGSVAFAHAAHSKALKNDAPAIRMVERSAPSVRRLCGASARSPPRGITWGQFVVSADGRVCISVATWTVAGGRGVVHSLVDPVTCTLYNGVTTSGLARPEAIAALLSRVPSQRPVRVPVEPASVCGLRVGDAVVRGKDWLVAQYVRNGMAQDGGAGCVGVVTGPGSQAGEVYVVWPQGPPGASGKGGCSASYRVRADAVDVVTTDKAPSWADLVIVPDALAQHPSFVGDSDYPAPGGSSTPGSVQTKARPSFGMSVAPISAGAEVRVTSDRHRLASRGQVAAVGATGTAVSRTPYGWWWCRLSCGYEGAFEEGVDIETADAATTRTAQALRTPTDVDPPPHGPRSVSSPSYVNPQRLPSPGSVVVPTGPVSTVLTSHKHSRSNGSGTYAAKPAVESRLIDAVVGVVVDTRTQGRRSNRGSVQGTSDGTDILVAWITAAREVYYGTATLADVIVVPTPSAHLEAPWLVRNGFVLPLQVAVAGAAAGGVAPSGQTGTRWCLSRWSFKPTTRVRSAAPGDIVVARDVDAVALWDRAATDTIRSASRMCWPFALVVVEVANEMVTCVPVAGDWRDITMDADDLHVLFQSAAAPNTLLPSGAVASMRRIKGTGTADDPLQWVYVRPHGPLDDLVAAIVAGGTSGGAVSRIVARWGFGSSLSALADAGASVGVVARVSASLEVCPLSVAIAVDTGVVVDARLVHHLVAAGMGSHISRDVALRHAKDVPPFPDHVPAGVVATMSISVDKVAVGGGAIPAAIRSCAEDVMASVDVIFAHARSGAPCNDGTVLLAAAWRMLDIKGLLHRSKSTGRRRVSKAAIKNPDGCADACHALLAMRLLGVRTEWIDVLAELHLDLLMSAAAQWEQTRAPPRPTIAPLPHVEVSVRRSPPSKSAVEWTALSCDASLSLSSAACDELMGMIGLEEVKAAVLETVRSVLLLNSQRRKATNDELTRNYLFVGKPGCGKTVVAKLFGRILADVSFRANSFYETTGSDIVANVDAFKEQLSKMEAADPPGGVVFIDEAYQIAPGGASASANSAASQLTREQQAAVDVLLNKVQAGAMGKHTTFILAGYPDDIQGMMQRNDGLERRFGYKVNFSDNSDEQLADIIEYEARKQKKRFVDVSTVGFDVALALARRVGLGRSSRTFGNAGAAIVRLNHVVGRQQKRLVDAQMQLQRRAQSGGQSRAGGQGGGQSRAGAGPRRGVIRDRDLELLTVRDCLGDPPNQATNKALAKIRAKIGWSKPKAHAEGIVEAMRASYEYELLGKAPVIPNLNAVMVGNPGTGKTSYAKLYAELLVSLELVRLPEVASRKAKDFVGQYIGSTSPMVDAEFRSAAGKVLLIDEAQGLDPGSQAMGGASGGTSAYKDEAGKALVNNMPGDGVGDTVVVMAGYLKGAESIEGLFKHADPGLTRRMNWPASKVHFEDFCDDDLAQVFARLAADNGIVVSDGAQEAARSLLRRRRQIAMFGNAGEVENLFRDACARCRARQSGTGNPTLEAIDVDHVRASQSETHPQLIPTLNKIRNAIENARKLQGAGADVRKAVGPLVFSFEGPPGTGKTTAARTVGRELADLGLLGSDEVFERGAKHMTGAFAGKTSREVQKCFDEARGAVLFIDEAYALGTIATFGKEAVDKITELLTHEDYMGNMAVVFAGYADKMREFYAMNVGIQSRIKRTVHFGPWTATQCADVFGRRCVERKARLDPPFDAVAVFADLVGRPGFSSGRTMEDLWPELEGDISRESDGTLCISRDALVAAADARCPRPPSSAMPHTSAPSAARHEGGYPGAHTYGPSGMPGMGTLSPMGGQGDAAMAIQHMQNFMLALQHSGGASWRPPLPTVPIAGPAVAVASDANVASMAFHQHQHQHQHQHQESPTSRIRPAVKQQKRSPSTGFQMTKEREEVNAAFLALNPAERPSIADIAAGRADSSKVDAVVRAMAAALQQQGLPVPSHDELRRTLESEARRAEDDFRQMAAEHEREQSEMERDEMSDMAAQHEADINAGIVVLETIEEQRVRMICAVCGREGCPVDPRPHTYTVRRVIARPR* # ORIGINAL: g7242.t1 original gene structure, not modified by PASA NODE_725_length_18565_cov_39.7312 AUGUSTUS gene 9610 9894 . - . ID=g7242;Name=g7242.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS mRNA 9610 9894 . - . ID=g7242.t1;Parent=g7242;Name=g7242.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS exon 9610 9894 . - . ID=g7242.t1.exon1;Parent=g7242.t1 NODE_725_length_18565_cov_39.7312 AUGUSTUS CDS 9610 9894 . - 0 ID=cds.g7242.t1;Parent=g7242.t1 #PROT g7242.t1 g7242 MYDRGQATAPSPCSCRVALGRTATITQKTKGMRRPPLLNGANGATADSVGANGTRKNADWHVPAPASCIERYREFVVNDRCQCYPEFLVEYRAE* # PASA_UPDATE: g1751.t1, single gene model update, valid-1, status:[pasa:asmbl_6349,status:12], valid-1 NODE_3642_length_3049_cov_38.0868 . gene 1134 2515 . - . ID=g1751;Name=g1751.t1 NODE_3642_length_3049_cov_38.0868 . mRNA 1134 2515 . - . ID=g1751.t1;Parent=g1751;Name=g1751.t1 NODE_3642_length_3049_cov_38.0868 . exon 1134 2515 . - . ID=g1751.t1.exon1;Parent=g1751.t1 NODE_3642_length_3049_cov_38.0868 . CDS 1364 2515 . - 0 ID=cds.g1751.t1;Parent=g1751.t1 NODE_3642_length_3049_cov_38.0868 . three_prime_UTR 1134 1363 . - . ID=g1751.t1.utr3p1;Parent=g1751.t1 #PROT g1751.t1 g1751 MDRPTRQVVSVGGIPTEILHLRKRQDDSRVCDVALVVIPGNPGLVDFYAEYISAFHDVATAADAVDVGVIVVGHAGHFPLEAGPHKDSLYTLDEQILHKKAFLDAFIVRPEPEDSAHLDEASTAAPSPPCAADALPFRARRVVLAGHSVGAHVCLKLLSFPKLGNDVVLRACLLFPTIHRIADTPNGRRMRLMFGSLRPAAAWTAHLLPFLPKKMLHTLVSWHLGMPPLYADIDATPSTADAQTGGGNEAKATDVHPLVSGAVRLLDYNVVNNALSLGAIEMREIGDLDNAQFAANAHRLVLYFGGNDDWVPSDRAQTLARDHPDARIYMCTEGISHAFVVDGAVSIGHKTWDWLREAAAAVPPVAAQRESASHQLAECARAV* # ORIGINAL: g1750.t1 original gene structure, not modified by PASA NODE_3642_length_3049_cov_38.0868 AUGUSTUS gene 331 854 . + . ID=g1750;Name=g1750.t1 NODE_3642_length_3049_cov_38.0868 AUGUSTUS mRNA 331 854 . + . ID=g1750.t1;Parent=g1750;Name=g1750.t1 NODE_3642_length_3049_cov_38.0868 AUGUSTUS exon 331 447 . + . ID=g1750.t1.exon1;Parent=g1750.t1 NODE_3642_length_3049_cov_38.0868 AUGUSTUS CDS 331 447 . + 0 ID=cds.g1750.t1;Parent=g1750.t1 NODE_3642_length_3049_cov_38.0868 AUGUSTUS exon 684 854 . + . ID=g1750.t1.exon2;Parent=g1750.t1 NODE_3642_length_3049_cov_38.0868 AUGUSTUS CDS 684 854 . + 0 ID=cds.g1750.t1;Parent=g1750.t1 #PROT g1750.t1 g1750 RNAEFMRFYFQQTIVQKIWPLLHCFDLPVASIGKPETEQARYDYIQRFLREDSVALLCGRDTEYISEPFDAAELYFDLMSVPFPPDADGEALAEN* # PASA_UPDATE: g5644.t1, single gene model update, valid-1, status:[pasa:asmbl_3594,status:12],[pasa:asmbl_3595,status:12],[pasa:asmbl_3596,status:12], valid-1 NODE_2132_length_7576_cov_39.5389 . gene 283 5837 . + . ID=g5644;Name=g5644.t1 NODE_2132_length_7576_cov_39.5389 . mRNA 283 5837 . + . ID=g5644.t1;Parent=g5644;Name=g5644.t1 NODE_2132_length_7576_cov_39.5389 . exon 283 1110 . + . ID=g5644.t1.exon1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . CDS 283 1110 . + 0 ID=cds.g5644.t1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . exon 1339 1488 . + . ID=g5644.t1.exon2;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . CDS 1339 1488 . + 0 ID=cds.g5644.t1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . exon 1740 1822 . + . ID=g5644.t1.exon3;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . CDS 1740 1822 . + 0 ID=cds.g5644.t1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . exon 2013 2198 . + . ID=g5644.t1.exon4;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . CDS 2013 2198 . + 1 ID=cds.g5644.t1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . exon 2353 5837 . + . ID=g5644.t1.exon5;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . CDS 2353 5581 . + 1 ID=cds.g5644.t1;Parent=g5644.t1 NODE_2132_length_7576_cov_39.5389 . three_prime_UTR 5582 5837 . + . ID=g5644.t1.utr3p1;Parent=g5644.t1 #PROT g5644.t1 g5644 MPAIPGSNTTTNTNTSDDGDALTRRCPFGLLYSTNGMRAYCLAQPVTPQALGLEDYCDFTNRGYFGFRWTTTVSPSMTTYDCPLGSTRGVDARGFSYCVWSDLPGASHLRSECGILAGRTGYSWELSKAIARVTTDGDACKLPFQVDGQWYDDCTLSTPGGELGGDSNYTSLPPAGVEWCSLTTVFGGRWGQCVPTATLPSGLPSDISVDAALVVGSGTFAKAYFFRGSSYVRFDVTANKQDADYPKPIAGKWSGLSFDTVDAAVEWAGNKAYFFKGTQFVRYDLTRDSQDAGYPLPINNATFPGLSFASIDAALNWGNGKVYFFKGDSYVRYDIASNQQDASYPRIIRDGWSGLSFTSDIDAAVKWTTSNGPKAYFFRSTSYARFDVTSGFQDPNYPAAIDDTTWPDLCFRPDVNCGEEAVGIRAETRQATTTAAVSSGSELIAAYRASSQPSGYCTKRVSTAAFLSSGAVCGTKSASPLIYRVTVRFYEPTDALSEWRFRFALNMDGGAMVMVDGQQVTFAGSAVTGAVFNSSDPINYVMDATAEGWHTVELFGLRISAVDSHAVQFSRVVTGMEGPNGGVVHTKRTPLWRPLTVVQLRDATAPADHSPLGTYRMWIRYRSAQPWMPVGNVAVGGALEAPVLRWAGGAPFTVTSRDVSGAIAFRTGADTYPSGVVTLRSADIPSDYYWSAFPVAAVGVRRLEGWYKASSGGIVADLKGILIDDLSGDVTPPSLVLYGGSTVVTSRGSPYVEPGFVAFDETDGDVTASVRVTGAVNADAVGMCILSYSAIDRMGNEARALRTAVVVDNSTCNGTTCGRFASCAASDAGVACACIGGFQGDGVTCADGTRPKLDLVGPPTMLIVKGAVFTDPGASALDNVDGDVTSSIVVAGAVDIQVPATYTLVYSVRDASNNTATAVNRTVTVVDYELCGNNFERPDGSTDGNGGCPPHSMCYGSAGRRVCVCADGYARSNPDAPCVDITPPVVVVKPSLVFVGLGASILPVSISAVDNNDGDISALVVRTPATLPAFQTGTSFEATFTVVDAAGNTGSATIVVAVASLDPCAQTVCNPKAVCSVTMSPAGEPLALCTCVNGTMGDGVTSCRDVDPPVIFIQGSQQLVWNVKVSLYGFSDPNVRAYDSRDGDVTSRLTMRFVVKSPSLIVTYRCVDKAGNAASPLVMSYAIPPELLDGLTFSGSNASPRALPMGSVRIVVPAVSPAVIVDRKDAIADLIAQLLSVASPSSGSAGGVGGGTRRDNAVFLALRAAVVFNWIDKYPGSSLATDIVFTVGNTAPSFVVAQLNANRGALNIAIGSPASLIESGPQFSSTSSGNSSSSQASPFRSVFFGVPAFFIITMVFSLIMYRRRMRRSAELRAGQSASRAAGEDAADDLPPPYDIPLPKGPPPPAFYGHSDEASGSSSPGDTVGDAHHTRNGTGGHIGNLGDDVESDHPATIEGTIEIVLGDDDDGEDVQGRSTGSLASVASAPPAYESQA* # PASA_UPDATE: g5125.t1, single gene model update, valid-1, status:[pasa:asmbl_125,status:3], valid-1 NODE_1034_length_14525_cov_40.1912 . gene 8059 9456 . + . ID=g5125;Name=g5125.t1 NODE_1034_length_14525_cov_40.1912 . mRNA 8059 9456 . + . ID=g5125.t1;Parent=g5125;Name=g5125.t1 NODE_1034_length_14525_cov_40.1912 . five_prime_UTR 8059 8457 . + . ID=g5125.t1.utr5p1;Parent=g5125.t1 NODE_1034_length_14525_cov_40.1912 . exon 8059 9456 . + . ID=g5125.t1.exon1;Parent=g5125.t1 NODE_1034_length_14525_cov_40.1912 . CDS 8458 9111 . + 0 ID=cds.g5125.t1;Parent=g5125.t1 NODE_1034_length_14525_cov_40.1912 . three_prime_UTR 9112 9456 . + . ID=g5125.t1.utr3p1;Parent=g5125.t1 #PROT g5125.t1 g5125 MPTMVDQLAASQLIPADIGADAFESDMKALKDKAAGVSGKRQYPQRARRERVTVVDSDGDDESDENNDGRSESSAGTHESTVADLQGAELLASMFTVSRHNSTSSNDDDSNSTPASPSVQSVSTTKRPSRGKSGSHTTKRVKRLEENRLAARRCREKKKEYVKTLEDRLRRMESWNKNLVSDLQTVQDILSKAYDAGTIVQPRLKLPLPSLSAGVHA* # PASA_UPDATE: g5126.t1, single gene model update, valid-1, status:[pasa:asmbl_124,status:3], valid-1 NODE_1034_length_14525_cov_40.1912 . gene 10237 13537 . + . ID=g5126;Name=g5126.t1 NODE_1034_length_14525_cov_40.1912 . mRNA 10237 13537 . + . ID=g5126.t1;Parent=g5126;Name=g5126.t1 NODE_1034_length_14525_cov_40.1912 . five_prime_UTR 10237 10596 . + . ID=g5126.t1.utr5p1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . exon 10237 10727 . + . ID=g5126.t1.exon1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . CDS 10597 10727 . + 0 ID=cds.g5126.t1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . exon 10906 11150 . + . ID=g5126.t1.exon2;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . CDS 10906 11150 . + 1 ID=cds.g5126.t1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . exon 11374 11598 . + . ID=g5126.t1.exon3;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . CDS 11374 11598 . + 2 ID=cds.g5126.t1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . exon 11785 12077 . + . ID=g5126.t1.exon4;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . CDS 11785 12077 . + 2 ID=cds.g5126.t1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . exon 12290 13537 . + . ID=g5126.t1.exon5;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . CDS 12290 13099 . + 0 ID=cds.g5126.t1;Parent=g5126.t1 NODE_1034_length_14525_cov_40.1912 . three_prime_UTR 13100 13537 . + . ID=g5126.t1.utr3p1;Parent=g5126.t1 #PROT g5126.t1 g5126 MAAVDVIIPSNEDKAFSSGDENSSADELEFTTANGIRLQATRNAAGDGIEVQAVLVDDIVIPVEEERLADDLGQKKRRGNGKALSAGAKERLKQKKREKKRQLKKKKVSAHPVISVSGDAENIISDNTSTDAAAYKARVLANLPKTTQVLQVDSARKITDLLEDELAKGKSTAFFIFNLSTVIGKMIEWKTHLPRVHPFYAAKCNPDVNIMSTLLSCGAGFDCASKTEMELALGLGTKPENIIFANPCKMIEHIQYAHSTGIKMMTFDNEAELVKVAKYHPTAEMVLRILSDDSHSTMPFGSKFGASSVESRNLLRKAHELKVKIVGVSFHVGSGCQSAEAYVNTFRMAKDVFDMAPEYGFTLNFLDIGGGWPGVNTEALNFPEIAKRISPILDSMFEADVRVIAEPGRFFAAECATLAANVIARRERNVKTTAAEMAAGLPEMKKIAQYYISDGVYGSFNNIIFDHQKPEPQILRSASASSATSLENDAARLQEQFDALKVTPAEKLQTTLFGPTCDSMDIITTDALLPPLDVGDWLYFMNMGSYTSASSSEFNGFKRPTITYIVN* # PASA_UPDATE: g5124.t1, single gene model update, valid-1, status:[pasa:asmbl_123,status:12], valid-1 NODE_1034_length_14525_cov_40.1912 . gene 5735 7252 . - . ID=g5124;Name=g5124.t1 NODE_1034_length_14525_cov_40.1912 . mRNA 5735 7252 . - . ID=g5124.t1;Parent=g5124;Name=g5124.t1 NODE_1034_length_14525_cov_40.1912 . five_prime_UTR 7190 7252 . - . ID=g5124.t1.utr5p1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . exon 6979 7252 . - . ID=g5124.t1.exon1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . CDS 6979 7189 . - 0 ID=cds.g5124.t1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . exon 6725 6856 . - . ID=g5124.t1.exon2;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . CDS 6725 6856 . - 2 ID=cds.g5124.t1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . exon 6371 6507 . - . ID=g5124.t1.exon3;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . CDS 6371 6507 . - 2 ID=cds.g5124.t1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . exon 5735 6087 . - . ID=g5124.t1.exon4;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . CDS 6028 6087 . - 0 ID=cds.g5124.t1;Parent=g5124.t1 NODE_1034_length_14525_cov_40.1912 . three_prime_UTR 5735 6027 . - . ID=g5124.t1.utr3p1;Parent=g5124.t1 #PROT g5124.t1 g5124 MKGYKSLGAHCWNFEEEENCVCLVWIAVRKMQFGVGTGLAVAAGIAAVGYCVYFDSWRRSQPDYKEKVKERRLRERSAKKTTAGPGGMPEFADAEAAHRYFLEEMQRSEPLLASGRFDEAVKHIANAVRICDQPTRLVMVLQQSLPAPVFQMLLAELDPESFGPGAAGPGAAPPADEQD* # ORIGINAL: g5122.t1 original gene structure, not modified by PASA NODE_1034_length_14525_cov_40.1912 AUGUSTUS gene 540 3206 . - . ID=g5122;Name=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS mRNA 540 3206 . - . ID=g5122.t1;Parent=g5122;Name=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 3202 3206 . - . ID=g5122.t1.exon1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 3202 3206 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 2819 2918 . - . ID=g5122.t1.exon2;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 2819 2918 . - 1 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 2531 2608 . - . ID=g5122.t1.exon3;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 2531 2608 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 1804 1920 . - . ID=g5122.t1.exon4;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 1804 1920 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 1512 1628 . - . ID=g5122.t1.exon5;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 1512 1628 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 1158 1274 . - . ID=g5122.t1.exon6;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 1158 1274 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 850 973 . - . ID=g5122.t1.exon7;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 850 973 . - 0 ID=cds.g5122.t1;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 540 640 . - . ID=g5122.t1.exon8;Parent=g5122.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 540 640 . - 2 ID=cds.g5122.t1;Parent=g5122.t1 #PROT g5122.t1 g5122 MKINLDGLLVYFPYDYIYPEQYQYMRELKRTLDAKGHCVLEMPSGTGKTVSLLSLIVSYQMVLEEMKGLIEFIKKERGADMPKFLGLGLTSRRNLCVNPEVSRERDGKLVDAACRSITASWVRNQHEQDPSVPVCRFYEGFDSNGRQAMLPSGVYSLDDMKDFGAERGWCPYFLSRHMITFANVVVYSYYYLLDPKIADLVSKELAKESVVVFDEAHNIDNVCIESMSVNITRRLLDRSAQNLTTLSRTIEE* # ORIGINAL: g5123.t1 original gene structure, not modified by PASA NODE_1034_length_14525_cov_40.1912 AUGUSTUS gene 3986 5321 . + . ID=g5123;Name=g5123.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS mRNA 3986 5321 . + . ID=g5123.t1;Parent=g5123;Name=g5123.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 3986 4497 . + . ID=g5123.t1.exon1;Parent=g5123.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 3986 4497 . + 0 ID=cds.g5123.t1;Parent=g5123.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS exon 4706 5321 . + . ID=g5123.t1.exon2;Parent=g5123.t1 NODE_1034_length_14525_cov_40.1912 AUGUSTUS CDS 4706 5321 . + 1 ID=cds.g5123.t1;Parent=g5123.t1 #PROT g5123.t1 g5123 MATPMDKSIAALIPALKGKSKSLGMNGLGIDVVPHDIMHFATFLKKLSIKDNKLRELPREVLSLVLLEFLNLGHNEIETVPKDIAALERLETLYLFANKLTSISPDIRRLGNLAVLNLNNNMLVELPPELFSLPSLRVFSADNNRLKGISREICNAEKLTDLSFSGNQLSRIRTLPDQMARMKKLAYLDVSLNKLVGFPFGLSRISLREFHFDRNPLIEGNNIVVVETEYEPLSLREMAARVLLEKCQLSADMDPNVLKVLARGRKCGLCGRPFVDTWLECARFTNLVKAQKAMEAKQKQKKLPPSQQRQIARKEREEEDALQEKERGEMLTGKMNTRNKIPLIVNLCSWNCFHSHQHSLLGIIHTSARPHTNMD* # PASA_UPDATE: g774.t1, single gene model update, valid-1, status:[pasa:asmbl_6224,status:12], valid-1 NODE_3567_length_3192_cov_42.3956 . gene 1 1618 . + . ID=g774;Name=g774.t1 NODE_3567_length_3192_cov_42.3956 . mRNA 1 1618 . + . ID=g774.t1;Parent=g774;Name=g774.t1 NODE_3567_length_3192_cov_42.3956 . five_prime_UTR 1 1 . + . ID=g774.t1.utr5p1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . exon 1 90 . + . ID=g774.t1.exon1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . CDS 2 90 . + 0 ID=cds.g774.t1;Parent=g774.t1;5_prime_partial=true NODE_3567_length_3192_cov_42.3956 . exon 320 489 . + . ID=g774.t1.exon2;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . CDS 320 489 . + 1 ID=cds.g774.t1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . exon 658 785 . + . ID=g774.t1.exon3;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . CDS 658 785 . + 2 ID=cds.g774.t1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . exon 1099 1456 . + . ID=g774.t1.exon4;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . CDS 1099 1456 . + 0 ID=cds.g774.t1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . exon 1568 1618 . + . ID=g774.t1.exon5;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . CDS 1568 1599 . + 2 ID=cds.g774.t1;Parent=g774.t1 NODE_3567_length_3192_cov_42.3956 . three_prime_UTR 1600 1618 . + . ID=g774.t1.utr3p1;Parent=g774.t1 #PROT g774.t1 g774 SLAWGVYLAWRTKAVPSKFRESKYIALSIWNITVIAVIILPLNYTVDQSNPDTQFLFTSIGLFVATTGTLLLIFAPKAYMHFMGDKAAASSGLTSGNGTKMSVASSGGSTSEGGDEARVVLENELLIQKEKYNKAVAENMELWDQINTLQRQNDALNDKVAEYAGDAASAVPHRLKEAGRRSSAVRFSDDKLKASDAEVTLSDVNLTTADSHQAALKQSEPESHAAESHFLLGINNRHLLLSDDFDPIDMRTVSATSV* # PASA_UPDATE: g775.t1, single gene model update, valid-1, status:[pasa:asmbl_6225,status:12], valid-1 NODE_3567_length_3192_cov_42.3956 . gene 2563 3192 . + . ID=g775;Name=g775.t1 NODE_3567_length_3192_cov_42.3956 . mRNA 2563 3192 . + . ID=g775.t1;Parent=g775;Name=g775.t1 NODE_3567_length_3192_cov_42.3956 . five_prime_UTR 2563 2644 . + . ID=g775.t1.utr5p1;Parent=g775.t1 NODE_3567_length_3192_cov_42.3956 . exon 2563 3192 . + . ID=g775.t1.exon1;Parent=g775.t1 NODE_3567_length_3192_cov_42.3956 . CDS 2645 3192 . + 0 ID=cds.g775.t1;Parent=g775.t1;3_prime_partial=true #PROT g775.t1 g775 MGEFAFDGVGLGANMLLALGPVNGAAGTIDATTMAFNRTSTSTFTGSAYLASALCLSQPNDVIRLVAGVYPTFQPPFAGMRFVGDGITSTFVSQQGAQTITIRAAISPVAYAGLYFLSSSSSSSITIDGGIATFNGTRFSTTGNVVPLTCDNGGAFNMSSAYFGNYSVTVTGGNIAGRPGGA # ORIGINAL: g6598.t1 original gene structure, not modified by PASA NODE_2326_length_6719_cov_38.9467 AUGUSTUS gene 3569 5170 . + . ID=g6598;Name=g6598.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS mRNA 3569 5170 . + . ID=g6598.t1;Parent=g6598;Name=g6598.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS exon 3569 5170 . + . ID=g6598.t1.exon1;Parent=g6598.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS CDS 3569 5170 . + 0 ID=cds.g6598.t1;Parent=g6598.t1 #PROT g6598.t1 g6598 MCAQLSTHLNVKTLHNIHTKWSNKSHTPTASFHSGRTLRARKSKQHLQLASLLGGSASSRRTDSLTSTQKGTSPPDAHVNNAVADVETRVNPSVAVKPAVAPPSTCPPASTSKADLSSIDRVVHDSRAWKELSASDLYTAARQTYLDSAAIRPPRQSGYQSSDYLNDSLRAFLAHRKPSDCVALRPSRIFSAQDDVTIVRMVKDGHGWSAIAAALNKPTSTVTLRFRLALDPRLRHGPFTPQEDNMIRAHVAQYGEGGWMLLSERMDYSRSNVSLRDRFDVLRCKGVWSDDERRRLLEGIVKHGRDWAAVAGHVDTGRTSKECRNTAVLAFKDSMPVKPTRRFTPEEDQRLRRAVEDCGRTDWEEVANFLPGRRITVLQRRYKMLLPKWLRVPYTRNARASLRALLRGDGDVENKLAAQFKDIDAAKGWVALELGMDDGSQVDWARVNGASGVERSAALDAVEKEIVPRVMIKEWKEGASAVWVPAWQWERPICTGRRAPIAAVMQHRRIRPFVAASLATAAKSAAVKARQKV* # ORIGINAL: g6597.t1 original gene structure, not modified by PASA NODE_2326_length_6719_cov_38.9467 AUGUSTUS gene 156 2180 . - . ID=g6597;Name=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS mRNA 156 2180 . - . ID=g6597.t1;Parent=g6597;Name=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS exon 1786 2180 . - . ID=g6597.t1.exon1;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS CDS 1786 2180 . - 0 ID=cds.g6597.t1;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS exon 1398 1479 . - . ID=g6597.t1.exon2;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS CDS 1398 1479 . - 1 ID=cds.g6597.t1;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS exon 682 1087 . - . ID=g6597.t1.exon3;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS CDS 682 1087 . - 0 ID=cds.g6597.t1;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS exon 156 508 . - . ID=g6597.t1.exon4;Parent=g6597.t1 NODE_2326_length_6719_cov_38.9467 AUGUSTUS CDS 156 508 . - 2 ID=cds.g6597.t1;Parent=g6597.t1 #PROT g6597.t1 g6597 MDSPASQLIFWAEDFTGASWDTRILDDGSDPVHLVPSTPPPTGSTHMAAPFLFSRASVRSIVRKPISERPRGLAALLSTLSGCVSGVRITWNDRPDVLPAGQWSIYRALASGSPSGVQVAVTFNASCPTTEGSPANRGINGVRELLRHLGFSADTLTCTSRMEGGRSARLASPDCHVGAAVGGTKTRFYYSPDTISVNPLAIISAVKSDLDGHSLAVIDSAALDASLTLVSLSLVRSPSNKEAFEASMEAVFRKGGDRVSADEVSVEVSRPLLTHVTVVAGSFDTQSADEQLEREYAIATPRAVIDTVNPVSAVSADVRRYISGNGLHRRLETRISLVDELCPDSSRLHLAVTESVQTSFYYDLDEIASQSTFGGPRVQSSSSIDIERPEYLSSQHVITVVTHVDRASDDG* # ORIGINAL: g2498.t1 original gene structure, not modified by PASA NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS gene 1136 8005 . + . ID=g2498;Name=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS mRNA 1136 8005 . + . ID=g2498.t1;Parent=g2498;Name=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 1136 1260 . + . ID=g2498.t1.exon1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 1136 1260 . + 0 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 1334 1405 . + . ID=g2498.t1.exon2;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 1334 1405 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 1622 1693 . + . ID=g2498.t1.exon3;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 1622 1693 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 1767 1838 . + . ID=g2498.t1.exon4;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 1767 1838 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 1914 1985 . + . ID=g2498.t1.exon5;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 1914 1985 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 2209 2280 . + . ID=g2498.t1.exon6;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 2209 2280 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 2355 2426 . + . ID=g2498.t1.exon7;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 2355 2426 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 2648 2719 . + . ID=g2498.t1.exon8;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 2648 2719 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 2941 3012 . + . ID=g2498.t1.exon9;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 2941 3012 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 3234 3305 . + . ID=g2498.t1.exon10;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 3234 3305 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 3381 3452 . + . ID=g2498.t1.exon11;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 3381 3452 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 3671 3742 . + . ID=g2498.t1.exon12;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 3671 3742 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 3824 3901 . + . ID=g2498.t1.exon13;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 3824 3901 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 4044 4933 . + . ID=g2498.t1.exon14;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 4044 4933 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 5070 5485 . + . ID=g2498.t1.exon15;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 5070 5485 . + 2 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 5562 6240 . + . ID=g2498.t1.exon16;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 5562 6240 . + 0 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 6390 6607 . + . ID=g2498.t1.exon17;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 6390 6607 . + 2 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 6835 6949 . + . ID=g2498.t1.exon18;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 6835 6949 . + 0 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 7031 7079 . + . ID=g2498.t1.exon19;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 7031 7079 . + 2 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 7159 7347 . + . ID=g2498.t1.exon20;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 7159 7347 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 7449 7582 . + . ID=g2498.t1.exon21;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 7449 7582 . + 1 ID=cds.g2498.t1;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS exon 7689 8005 . + . ID=g2498.t1.exon22;Parent=g2498.t1 NODE_1812_length_9125_cov_23.4379_potentialcontaminant AUGUSTUS CDS 7689 8005 . + 2 ID=cds.g2498.t1;Parent=g2498.t1 #PROT g2498.t1 g2498 MLLLHPPASHPVRSAARSDLHSNQIATLPTGIFDKLTALSFLYLYSNQIATLTPGVFDKLTALIYLYLNSNQISTLPTGIFDKLTALAYFRLDWNQIATLPAGIFDKLTGLTTFFLHSNQIASLPTGIFDKLTVVTTISLYSNQIGTLPTGIFDKLTALTQLLLDSNQIATLPTGIFDTLTRLSILLLDSNQIATLPTGIFDKLTRLIYLLLDSNQIATLTTGIFDKLTRLIYLLLDSNQIATLPTGIFDTLTRLSILSLYSNQIGTLPTGIFDKLTALTQLYLQSNQIATLPTGIFDKLTALTYFDLSSNQIATLPTGIFNTLASLSAPQLSGNPGVKGKLCTNSASRCVNKTCTSCFCEVGWTGPTCSSVCPANTFGPDCSISCGCQNDAACDRFTSICTCTAGWTGVKCNEACASGRFGANCNTTCACKNAASCDRFTGGCTCTAGWTGIICDQACAPDRFGINCSSACTCQNGASCDRFTGWCTCTAGWTGVKCNETCASDRFGANCNTTCACKNGAACDRFTGNCTCTAGWTGLSCDQACASDRFGANCNTTCACKNGACDRFTGACTCTAGWMGDICTIACPPGRYGVNCASTCVCGDGNCDSAHGNCTCIPGSGFHGPSCKSCTCENGGVCDDGVPGNGACDCSAVLGLTGPSCNTACDHLGGPLQMFGNGCQSYCLCRNGSSSCDSTTGKCTCAIGWTGMICDKIIPPSTPTVNARAESSMNGIGIRLRWSPPDTLGAQAWPGWRYEITRISCFSAMFSVAGNVFDYLDTDVVINQGYAYSITAFNGANVSSEVSGLVAIKSLQTMDPPSKPYNIAVTATLTPDKLKPMIAFTWKEDTSSGPILQSFIYRDGQFLVSLSSTEFNDMNVEVGKTYEYEFVSQNQYGNSTAERKTGTASIAPPSAASEPASSSTNVAGPVAGGVIGAVVGAAAIVLAILFFRKRSSKQKMERIARSELELIDTVVRRPEIAEIEIPGSCILLKNRIGEGEFGEVYLAEITLERAGSVSSIKGAVKTFKVTSLSTADEIRSARSAFMAEIDLMRSIPSHEHVIQLIGVCTQSDPNCMVLEFAAHGDLRHFLTDAKTIDFSPTDLLCFCIDIARGMEHLAKCQIVHRDLAARNCMVVAGPRAPNVAENGWKLSSKAQVIVKVADMGLSRDTGGSGDYYLAKTRRKLPVKWMAPESLDRRIFTHASDMWSFGIVMWEVFARGAKPYPGLENYGVAGYLSQNKRMDPPNDCPKPVHAVMDSCWRKHPETRPQFSQIVLQLRRAMALLQGISSTIDNIKIADDSTATSDTYALTVPDAPYSDITLGTIQNPGFLQEARHSLA* # PASA_UPDATE: g11272.t1, single gene model update, valid-1, status:[pasa:asmbl_4157,status:12], valid-1 NODE_236_length_29992_cov_42.4849 . gene 22665 29929 . - . ID=g11272;Name=g11272.t1 NODE_236_length_29992_cov_42.4849 . mRNA 22665 29929 . - . ID=g11272.t1;Parent=g11272;Name=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 29567 29929 . - . ID=g11272.t1.exon1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 29567 29929 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 29149 29285 . - . ID=g11272.t1.exon2;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 29149 29285 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 28730 28831 . - . ID=g11272.t1.exon3;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 28730 28831 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 28285 28499 . - . ID=g11272.t1.exon4;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 28285 28499 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 27719 28023 . - . ID=g11272.t1.exon5;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 27719 28023 . - 2 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 26872 27485 . - . ID=g11272.t1.exon6;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 26872 27485 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 26392 26643 . - . ID=g11272.t1.exon7;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 26392 26643 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 26066 26162 . - . ID=g11272.t1.exon8;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 26066 26162 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 25506 25727 . - . ID=g11272.t1.exon9;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 25506 25727 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 25250 25326 . - . ID=g11272.t1.exon10;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 25250 25326 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 24766 24939 . - . ID=g11272.t1.exon11;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 24766 24939 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 24434 24574 . - . ID=g11272.t1.exon12;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 24434 24574 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 23154 23967 . - . ID=g11272.t1.exon13;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 23154 23967 . - 1 ID=cds.g11272.t1;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . exon 22665 22829 . - . ID=g11272.t1.exon14;Parent=g11272.t1 NODE_236_length_29992_cov_42.4849 . CDS 22665 22829 . - 0 ID=cds.g11272.t1;Parent=g11272.t1 #PROT g11272.t1 g11272 MHAHICTGSRVLALDPAGRIRVTAMKQRLRKRLAGRPNQLVDGYFCKYAGVDAESGACTLGELDSLAETLLKRLLSAISAQYPLPDGGVGDLDPLADQRRLVVACKDSFVEARADLFVGRQDLLKEVCAHAEGASMAAASSSFMIILGSPGSGKSALLAKSLQLLGRFGGPGHHVLYHFAGVGPNATDTLSMLSRFCNELRARIAVVAGASAAADADRLIVANGGEAVVRPGAPPEICLPEQYAGLCVAFHGLLGILANAVRIVIVVDAINQLDDMPHEDRLAWIPLDMPTANVRTIVTCVTDSDSVAQLSARTSGKASLRIVHLGPLSKDEQRAVVKDALARVSKRLNESVGDNQMELLLAHDGAKFPLWLVVACEELRVFGVFEHVSQTIRDLPDDVAGLLQRLIGRLERMHGKPTVCRALLAIACSRAGLLEEEVLDLLTASASMQGVADSKPHADSVHTDAVSHASWAALHRDIDFSLAPSAETGEATLKFFHREMVLAVVRRYLKPLETEQSSSSASEVMMSSSATPSRDGASSQNIAAFDCRPVHAYLAAYFKSKSQAEEADREHGDFPRSLRELSFHQRMAGITPDVLVAVRLRPLTDDEIARGSKCVIKMRGAQITVTENGEVADKSEKTAANRTNQHFFAFDFCLDSSGQDGSRFVSQEAVFKLIGQDVFLNALEGYNVTVFSYGQTGSGKTYSMFGDPSTGSVDGFAPRFLAEMFRKVSGLNGESRAGSEYSVAMCMMEIYLEDIYDLLVPASAQTPLKVRCHPDTGPYVEKLTWASIRNFTAMNALMAEGFGQRTVAATNMNRQSSRSHTIVQLKFTWKRTIGKGSAVQGSSLISLVDLAGSERVRTRGGNVERHREGVAINSSLLVLNACLSSLALRSVKPQTVIPYRAFLHPTHILEPRIRVSGTSRRPRDCDLRSVYPSSKVSFRYSLMSIFFMFKNFSFGYVTGAICLFAMGFQAADIWDRCQVAPATSDIFSACAADSEQCGIDPSSPIVSGVASVAAAAAEAAKRVELGSAAEALSAAVLASPLSSFIFAVAWIVLGFFTDIGARTRLWGVLIGFIHAAAYLLVAATGHYMFYAVILPRYHALRLLRVYHQLWVKLVVFLFGCIGGPMVMGTYLLCAGIFGKHDNDSFAALKVEDYKSIVRIKIDSVDHTMTVYALGIDEVQKEWPAIRGMGARDALTSQCRNPLWYSPQADRMCHLIEKFTVFKDPM* # ORIGINAL: g11267.t1 original gene structure, not modified by PASA NODE_236_length_29992_cov_42.4849 AUGUSTUS gene 5499 8033 . + . ID=g11267;Name=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS mRNA 5499 8033 . + . ID=g11267.t1;Parent=g11267;Name=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 5499 6917 . + . ID=g11267.t1.exon1;Parent=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 5499 6917 . + 0 ID=cds.g11267.t1;Parent=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 7138 7311 . + . ID=g11267.t1.exon2;Parent=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 7138 7311 . + 0 ID=cds.g11267.t1;Parent=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 7473 8033 . + . ID=g11267.t1.exon3;Parent=g11267.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 7473 8033 . + 0 ID=cds.g11267.t1;Parent=g11267.t1 #PROT g11267.t1 g11267 MAQLKGAPEKKRVAGGRVTQPPIQRHGSGSGKAMTKKPTSVDSSSGDSDDERASPRRTRSSAPLAAVESPVSPDDNGGRLDEQLEHHMRIVREMLWAVEGCFKIPGQSATRPSSQAGGKGKAPASGHGTANNMRHNFDAVRVTRKYDGSSSGSEGDGDDGDASNASDRNSDVGSDISPLSHAKKSQQRARTAIPISGSGRGRGLKGKRGADPTVKKALRWVPGDGSGGAKSKSGAGGQKGEEKIKKRGRPPANKAAVIDSTSGNSDGGSSESDMPRKLPRRDQEYTRRGGKSEKGERDERPATRHEDEELVVIGVEEKDTKDTNGDDKSEGTGSNASAEDDAASAVDAATAKSAAGGTGRGALGGPFRFSSFAKENHKHVIYGVRFNPHHNTRQGTNILATVGGNRCTVYECNGDGSLVVLQSYMDEDQEEELYTCAWSYEPKHGGGSAPILAVAGLRGIIKIIRTDTRSVAKVLVGHGHAVNDLRFHPLLPHILLSASQDVSLRLWNVRTGVPVAIFGGDGGHRDQILHTDFNLDATRIVSCGMDVSIKIWAADTPEIARAIEQSDAYDPKSPKSYGETIVVHYPIFSTLSVHENYIDCVAWLGNLILSKSVREKNHVTLWMPDDGPRKTVAKDKAAYTGDPVIELHQFEIKDCNVWYVRFCIDALQRTLAVGNTKGVVFVYPLDVPRLSQSQAQVLSHPKCRSTVRQVAISADGQ* # PASA_UPDATE: g11269.t1, single gene model update, valid-1, status:[pasa:asmbl_4160,status:3], valid-1 NODE_236_length_29992_cov_42.4849 . gene 9806 13517 . + . ID=g11269;Name=g11269.t1 NODE_236_length_29992_cov_42.4849 . mRNA 9806 13517 . + . ID=g11269.t1;Parent=g11269;Name=g11269.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 9806 9992 . + . ID=g11269.t1.utr5p1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 9806 10053 . + . ID=g11269.t1.exon1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 9993 10053 . + 0 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 10298 10500 . + . ID=g11269.t1.exon2;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 10298 10500 . + 2 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 10641 11224 . + . ID=g11269.t1.exon3;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 10641 11224 . + 0 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 11404 11577 . + . ID=g11269.t1.exon4;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 11404 11577 . + 1 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 11852 12000 . + . ID=g11269.t1.exon5;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 11852 12000 . + 1 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 12172 12381 . + . ID=g11269.t1.exon6;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 12172 12381 . + 2 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 12509 12699 . + . ID=g11269.t1.exon7;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 12509 12699 . + 2 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 12854 12988 . + . ID=g11269.t1.exon8;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 12854 12988 . + 0 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . exon 13105 13517 . + . ID=g11269.t1.exon9;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . CDS 13105 13281 . + 0 ID=cds.g11269.t1;Parent=g11269.t1 NODE_236_length_29992_cov_42.4849 . three_prime_UTR 13282 13517 . + . ID=g11269.t1.utr3p1;Parent=g11269.t1 #PROT g11269.t1 g11269 MAEAVGAEIGLELKSTVGFGGNVHGGLNIHPDKKHVIYPLGSTVVVREIANNHKQDFLQGHTNTVSCVAVSKSGRFIASGQITHMGFQAEIIVWDFATRKLVYKFAIHKVKVQALAFSPNDKYLVSLGGQDDNSIILWDLAHGHAICGSPAAKESSGTALAVAYSNDNDDVFITGGSYTLRVWELDLANRKVRPTDCQLGQLKRVVMCIVVGNDNEHFFCGTTSGDVLQVNLRTKLFKHSGPQKEKLSMGVLSVCLAPNNDIVVGAGDGTVAIIKANSLKFGSSTKLDGAVTSITAPSACGSFFFAGTSQSNIYDISHESLTASLKSTCHYDVINDVAFPYGYSDCFATCSVNDIRVWNAKTSTELLRITVPNLECHAVCFTTDGKTIVSGWNDGKIRAFAPQSGRLVYVIHDAHNKGVTAVAATHDCKRLITGGGDGQVRVWRIGPSTQTMLGAMKEHKGLVTSICVRKNDNECVSSSNDGSCIIWDLERFVRNQVMFAATMFKSVCYHPDECQIVTGGTDRKIGYWETFDGSLIRELEGSQSSSINGLAVAPDGNHYVTGGNDKLIKVWKYDEGDVTHVGVGHSGDILRVKVCPNQRLIVSVSSDGAIFIWSYPYQRHQSQPSSR* # PASA_UPDATE: g11268.t1, single gene model update, valid-1, status:[pasa:asmbl_4154,status:12], valid-1 NODE_236_length_29992_cov_42.4849 . gene 8270 9397 . - . ID=g11268;Name=g11268.t1 NODE_236_length_29992_cov_42.4849 . mRNA 8270 9397 . - . ID=g11268.t1;Parent=g11268;Name=g11268.t1 NODE_236_length_29992_cov_42.4849 . exon 9182 9397 . - . ID=g11268.t1.exon1;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . CDS 9182 9397 . - 0 ID=cds.g11268.t1;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . exon 8869 9081 . - . ID=g11268.t1.exon2;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . CDS 8869 9081 . - 0 ID=cds.g11268.t1;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . exon 8270 8627 . - . ID=g11268.t1.exon3;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . CDS 8535 8627 . - 0 ID=cds.g11268.t1;Parent=g11268.t1 NODE_236_length_29992_cov_42.4849 . three_prime_UTR 8270 8534 . - . ID=g11268.t1.utr3p1;Parent=g11268.t1 #PROT g11268.t1 g11268 MGPARLSFESVRPGGFDRQKLLRHVGDIMSALGVGAYHVGVVFTSDARMQRLNSEYLGVDAPTDILSFPVEERAPGTLPTLDASAPGARMASELGDMYIGLRYVKRHCCEDGVLLQDRLAVLAAHGVCHLLGHDHGARDEWKKMNAEEWKALNVINRKFGRSLAPLTLPPDDG* # PASA_UPDATE: g11265.t1, single gene model update, valid-1, status:[pasa:asmbl_4158,status:3], valid-1 NODE_236_length_29992_cov_42.4849 . gene 1276 4420 . + . ID=g11265;Name=g11265.t1 NODE_236_length_29992_cov_42.4849 . mRNA 1276 4420 . + . ID=g11265.t1;Parent=g11265;Name=g11265.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 1276 1383 . + . ID=g11265.t1.utr5p1;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . exon 1276 1725 . + . ID=g11265.t1.exon1;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . CDS 1384 1725 . + 0 ID=cds.g11265.t1;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . exon 1907 1955 . + . ID=g11265.t1.exon2;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . CDS 1907 1955 . + 0 ID=cds.g11265.t1;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . exon 2134 4420 . + . ID=g11265.t1.exon3;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . CDS 2134 4088 . + 2 ID=cds.g11265.t1;Parent=g11265.t1 NODE_236_length_29992_cov_42.4849 . three_prime_UTR 4089 4420 . + . ID=g11265.t1.utr3p1;Parent=g11265.t1 #PROT g11265.t1 g11265 MLQRVRSLFPRGRALNSQRERLRGECKPQGDNDASVCMQLYGARQGDNGALNTCDSSVSSTTLSHNSPLKEDLMPGLTLPSARPSVEVDCVLLEEVKTEEEIYCEHWRVDMSQQLAARDKCQCAQFATLQEYQPPGRISEISDEDEAVTLAERLLYLETRLHKRTKMSRRSIRLLGAFLGFVLLIAILLSISLSRAILDALDPAADTCAGSFAITSVDTFTAFLDLGCVRVGNLSINGSALSRPVPSPSLHFLSLASVVNSLSVVAWHGNQSTLAFPALVQTGDLLLSDVTLRALEFPALVLSADLVADNVQILDGVRFPQLKYALSVALHDVYTSAIDLSALENVPGNFTIQGARSSTDMVVSRLRLAGLIDIEGPLRINEASDTYGTPPKINFPSLESARGIVVWTMVATSGVSFPRVKDVQFLSMGAIVFNPLYAVSVRPTNATIDFSSLQRASFIIMRAVNGLSAMNFPSLLHVDSAIFDSNTIMSTISFPSLETAADLFFGSNSALVNVTIPRLHTVTDGLRFMGHPRLPSLSAPSLKRGVVLFSLNSGITEVSFPVMEMGSVVFGANNRLKTISFPALVDVGIASFFRNTALTAISMPLVTGFSSSGWILPTGPSSIFWAVVQDDIVEAFHTTLTESKLMSVGRCLGLGSLSIFDNANLTHVDFSTLNNAQTLIVKENPKLCASRILIPSTTSVACGCSFEANGSDNAACSAPAPVGGSSAWCQALWSNVTATTGSVAAADPTVSRRSGSPVIPWPPPLAASSTTPHKSRHRGIG* # PASA_UPDATE: g11270.t1, single gene model update, valid-1, status:[pasa:asmbl_4162,status:3], valid-1 NODE_236_length_29992_cov_42.4849 . gene 14536 20712 . + . ID=g11270;Name=g11270.t1 NODE_236_length_29992_cov_42.4849 . mRNA 14536 20712 . + . ID=g11270.t1;Parent=g11270;Name=g11270.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 14536 14640 . + . ID=g11270.t1.utr5p1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 14536 15386 . + . ID=g11270.t1.exon1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 14641 15386 . + 0 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 15591 15705 . + . ID=g11270.t1.exon2;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 15591 15705 . + 1 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 15993 16368 . + . ID=g11270.t1.exon3;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 15993 16368 . + 0 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 16630 17383 . + . ID=g11270.t1.exon4;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 16630 17383 . + 2 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 17667 18369 . + . ID=g11270.t1.exon5;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 17667 18369 . + 1 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 18517 18674 . + . ID=g11270.t1.exon6;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 18517 18674 . + 0 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . exon 18901 20712 . + . ID=g11270.t1.exon7;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . CDS 18901 20083 . + 1 ID=cds.g11270.t1;Parent=g11270.t1 NODE_236_length_29992_cov_42.4849 . three_prime_UTR 20084 20712 . + . ID=g11270.t1.utr3p1;Parent=g11270.t1 #PROT g11270.t1 g11270 MSDPERPSVGTVAVSVDDFGGASRNSSSPSASVRDAREKAAYEEAIEMSEIRMHEDTMNSEVQRELSNAVKGGLVGVGAVPAGSDEDLRNLHSKKPTRSAFERANPLSRMTFWWMNPLISRARRGKLVDDDFELCDSEEAQFCYDQFSQHWDEELKRPEPSLLRALRKTFWKDFVIAGIFKLFWGAFMILAAFYFVLFLVKNVKNFNNPNYPQWQGFILATFFSVTCFCMSVSLQQMTSRCSQVGIRVRGAVMTAIYRKSLRTEGVSNKVGDVITLVSNDCSRLHEGCTNFHFLWSGPIESFTIVGLVFYQTGISALPGLIIMIAVVPLQYGLALLVTRARRKNIKITDVRVQIMQEILQAIKLVKFYAWERSFAKQVKTLRKKERYYLQKIANYKTIHLMIVFIIPPILVLAIFAVYVLWTGHILESDTSFTVLSLFNSLRFPLVVLPVALKNASDTLSALRRIGRFLQSAEIQPLERGETAAIEFHDASITYPKREDEKLDAEEIETLKELNEPGRGIVDDTSDFKLSGINFAMKPGQLMAVVGPVGCGKTSIINAILGEAVVSTGSMKVGGRLAYVPQTSWIQQMSVRDNILFGSKFDRERYDRVIHACALSRDLEILAQGDMTEIGEGGINLSGGQRQRISLARAVYSNAEVFLLDGPLSAVDQHTCNHIFEHCIKGLLADKLVILVTHQLHLLSECDIVAIVKDCAMVYCGPYNDESISKHMSAAAAQIAVEGSHHHKTRDPKKKNKRRDSVREIPTGALTFADRAAAADRKVTLATYMGWIRQGTRVGVMMALLVLAGTQVVRIISDLFVREWTNNNKAPNQAYYVKAYAGYVAAFLVLLLLRGWSFFTLALRAASRLHNKMFAAVLRAPISFFTLTPMGPLLNCFSKQQDQVDETLPDAVHMGGIYLMILCTTIGVVISVIPYFALVLPLLVAMFVGMQWFQGTAAEYLKNRLAVTNPPIYAHVAESLSGILVVRAFDAEERFKKDNRKMINTNHRIVFGMDQLQCWAAFRLDLFASLLVLATAFFCVGLRTDIKGSSAGLAISNSLQMLVFLTLLVRAFTEARSQMNAVESILFYTKNAGFESNKKEIEITRGQWPPRGQIEFRDVSMSYFADSDRVLSNVSLTIQAGEKVGIVGRTGSGKSSLLMVLFRLVEPATGTIFIDDVDICKMDLEDLRSSMSIIPQEPVMFKGTIRSNLDPFGAHPDERLWRALELSHLKATVEEFPMKLEAPVLEQGRNLSLGQKQLFCLTRAILNDSKILVLDEATSALDLETDALIQETIRTVFEARTVLTIAHRLETIMDYDKVLFMDRGLNVEFGKHADLLANPEGHFSRLVRG* # ORIGINAL: g11271.t1 original gene structure, not modified by PASA NODE_236_length_29992_cov_42.4849 AUGUSTUS gene 21040 22342 . + . ID=g11271;Name=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS mRNA 21040 22342 . + . ID=g11271.t1;Parent=g11271;Name=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 21040 21202 . + . ID=g11271.t1.exon1;Parent=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 21040 21202 . + 0 ID=cds.g11271.t1;Parent=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 21538 21899 . + . ID=g11271.t1.exon2;Parent=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 21538 21899 . + 2 ID=cds.g11271.t1;Parent=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS exon 22217 22342 . + . ID=g11271.t1.exon3;Parent=g11271.t1 NODE_236_length_29992_cov_42.4849 AUGUSTUS CDS 22217 22342 . + 0 ID=cds.g11271.t1;Parent=g11271.t1 #PROT g11271.t1 g11271 MALLFLRSGTSSMASCINRSGAAIISNNARRVSVPPHLKAVALRRFASGPDANKLLFALGDVIAQKLSTEDSEFDFKRLARASAYGFAILGPLSHYHFNLLHWIVVTRLGIRGAAMPFAKVALEQFGYWSPFILSVYITSMGLMEGLSVTEATRRLRERFWPTMKANWVVWPAVGIINFRFVPVAHQLNFVLIVSLGWAAYLSAMNAAAIAKLSGE* # PASA_UPDATE: g11266.t1, single gene model update, valid-1, status:[pasa:asmbl_4159,status:12], valid-1 NODE_236_length_29992_cov_42.4849 . gene 4605 5159 . + . ID=g11266;Name=g11266.t1 NODE_236_length_29992_cov_42.4849 . mRNA 4605 5159 . + . ID=g11266.t1;Parent=g11266;Name=g11266.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 4605 4628 . + . ID=g11266.t1.utr5p1;Parent=g11266.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 4809 4866 . + . ID=g11266.t1.utr5p2;Parent=g11266.t1 NODE_236_length_29992_cov_42.4849 . exon 4605 4628 . + . ID=g11266.t1.exon1;Parent=g11266.t1 NODE_236_length_29992_cov_42.4849 . exon 4809 5159 . + . ID=g11266.t1.exon2;Parent=g11266.t1 NODE_236_length_29992_cov_42.4849 . CDS 4867 5136 . + 0 ID=cds.g11266.t1;Parent=g11266.t1 NODE_236_length_29992_cov_42.4849 . three_prime_UTR 5137 5159 . + . ID=g11266.t1.utr3p1;Parent=g11266.t1 #PROT g11266.t1 g11266 MAETYVLRHPGSCTGMYWRADPSGASTKQVGNDDWPRNGAVLKGISHDRPDMKWLEVSSWKQAGSSEWIESKGLWMPFEQGGLLLHRQQ* # PASA_UPDATE: g11264.t1, single gene model update, valid-1, status:[pasa:asmbl_4153,status:12], valid-1 NODE_236_length_29992_cov_42.4849 . gene 219 705 . - . ID=g11264;Name=g11264.t1 NODE_236_length_29992_cov_42.4849 . mRNA 219 705 . - . ID=g11264.t1;Parent=g11264;Name=g11264.t1 NODE_236_length_29992_cov_42.4849 . five_prime_UTR 449 705 . - . ID=g11264.t1.utr5p1;Parent=g11264.t1 NODE_236_length_29992_cov_42.4849 . exon 219 705 . - . ID=g11264.t1.exon1;Parent=g11264.t1 NODE_236_length_29992_cov_42.4849 . CDS 219 448 . - 0 ID=cds.g11264.t1;Parent=g11264.t1;3_prime_partial=true #PROT g11264.t1 g11264 MADDGGIKGNYNLKNSAVKRILREVKEMQNATDQYYAQPLEDNIFEWHFTLRGPPDSDFTGGLYHGRILLPPEYPF # ORIGINAL: g12745.t1 original gene structure, not modified by PASA NODE_2537_length_5980_cov_40.5782 AUGUSTUS gene 4491 5596 . - . ID=g12745;Name=g12745.t1 NODE_2537_length_5980_cov_40.5782 AUGUSTUS mRNA 4491 5596 . - . ID=g12745.t1;Parent=g12745;Name=g12745.t1 NODE_2537_length_5980_cov_40.5782 AUGUSTUS exon 5356 5596 . - . ID=g12745.t1.exon1;Parent=g12745.t1 NODE_2537_length_5980_cov_40.5782 AUGUSTUS CDS 5356 5596 . - 0 ID=cds.g12745.t1;Parent=g12745.t1 NODE_2537_length_5980_cov_40.5782 AUGUSTUS exon 4491 5128 . - . ID=g12745.t1.exon2;Parent=g12745.t1 NODE_2537_length_5980_cov_40.5782 AUGUSTUS CDS 4491 5128 . - 2 ID=cds.g12745.t1;Parent=g12745.t1 #PROT g12745.t1 g12745 MVSPTAVALETTAPSMVNTSSVAKAFAFSSGKTDIVAGSNIIGGVLEGTDESVESSSSDESAGDDAMDVDGNTKTDDSSELAPIPATDPRTPTATTITATPTAAKRTKRPREHDENDKDNGKDNDKDNGNGSPAIHKRKSPKTRAEKREASSGDAEQRDDVKVASVSTPYTKTPKSAKRRAVAMEEDGDKVSVDAHVTDDVAASTETAETPAKKGKSPKTRAQKAVASANGTSNIATPAKTPAKTPAKTPAKTPAKTPAKTPAKTPAKQWTPGSTGKAIASVGKSAPRSTRK* # PASA_UPDATE: g12744.t1, single gene model update, valid-1, status:[pasa:asmbl_4516,status:12], valid-1 NODE_2537_length_5980_cov_40.5782 . gene 292 3920 . + . ID=g12744;Name=g12744.t1 NODE_2537_length_5980_cov_40.5782 . mRNA 292 3920 . + . ID=g12744.t1;Parent=g12744;Name=g12744.t1 NODE_2537_length_5980_cov_40.5782 . exon 292 501 . + . ID=g12744.t1.exon1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 292 501 . + 0 ID=cds.g12744.t1;Parent=g12744.t1;5_prime_partial=true NODE_2537_length_5980_cov_40.5782 . exon 616 1003 . + . ID=g12744.t1.exon2;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 616 1003 . + 0 ID=cds.g12744.t1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . exon 1315 1445 . + . ID=g12744.t1.exon3;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 1315 1445 . + 2 ID=cds.g12744.t1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . exon 1703 1781 . + . ID=g12744.t1.exon4;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 1703 1781 . + 0 ID=cds.g12744.t1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . exon 2080 3503 . + . ID=g12744.t1.exon5;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 2080 3503 . + 2 ID=cds.g12744.t1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . exon 3680 3920 . + . ID=g12744.t1.exon6;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . CDS 3680 3715 . + 0 ID=cds.g12744.t1;Parent=g12744.t1 NODE_2537_length_5980_cov_40.5782 . three_prime_UTR 3716 3920 . + . ID=g12744.t1.utr3p1;Parent=g12744.t1 #PROT g12744.t1 g12744 DIVKAQKDMAGYEFALPLEFSTHDRDYVSLTAKDLKHSIKSVAQKTLRKSKADYAAISVLARLYKGPLAQTLKDYDQTISSGNTSVTACIGIAPERIATVGGTDTRGTRHELQVRVAFADLHSEDLRRGCEISLSVRNARGQRVFRAVYCGWESRDEYRTAVYAGSHRPHYAETVRLSIPAVDYADLHLCIVARDVAEDGTTTGNTYYGFLPFSSRDQFSKPALMADGDHEASPCVGVVVVVEVTLFSVVTAEDNNYTKEMAALSSGLQPPAGPKHDYVLLQTSLPTRSIIDVDKLGKKATVPLKQIGSQPAFMPGKGPRLLEDLAVGNTMASSESQRTLRRQGSHNNILDDTTQLPSPSLRGHQRSASQPVLDIADPPEATSKPDAKVAGSTPDQKPHAQALIHAVGADAGPAPAPAPKASGPAKNLFSMVMSSRPPPAPSGGGAATGGVPAKDKDSTAQAATVLPSRSPSGAPPPVLPPKSETHVSRDDASSAAAPTPPRPSKPTHMRSRSEMPKVSPDIASMYATVNKRPRVGEENARSVELTAAEARQALDAEEASLATATATPHVHAPPQSPSAVLVAVSGAAVSSAPVSPSLAAAPALPPKRQNTAEFSVGAPPSLPPKAGSRVSLFGPAQTSSPATSPAPAGHVAGHVEAPAAAAHGSAPSSPVVVRGRTSDAGSVNATSTAVAEQLVSEAKGDGLAALQKKMKMLLGHDVAELNAEQLKSLLALQEAAVARTRIALEERLKKTASDA* # PASA_UPDATE: g9495.t1, single gene model update, valid-1, status:[pasa:asmbl_8086,status:12], valid-1 NODE_5462_length_841_cov_39.6136 . gene 2 841 . + . ID=g9495;Name=g9495.t1 NODE_5462_length_841_cov_39.6136 . mRNA 2 841 . + . ID=g9495.t1;Parent=g9495;Name=g9495.t1 NODE_5462_length_841_cov_39.6136 . exon 2 841 . + . ID=g9495.t1.exon1;Parent=g9495.t1 NODE_5462_length_841_cov_39.6136 . CDS 2 841 . + 0 ID=cds.g9495.t1;Parent=g9495.t1;5_prime_partial=true;3_prime_partial=true #PROT g9495.t1 g9495 QQQQQQQQQQQQQQQETQLRRHSLPARMASWDKKDAEASGYQTTSYAHTPSAWNPQTPIGDCPPPYETVDAALPVNGQFMPTAALSLATHPSMSPSAPRESLISAATQSPYAMPAPTVDAWRPGVRDGYTGGAAPSAPRVSVIQRADAGSRPVPRESTTLFDVKPVLKFDGYSDNSARGRNCAACFDSISPGADKTGIACVQGRNAFHYECFQLKMAPKCAYCADPLVGLPSKGLSGAWGVYQGKSYHQECYDGYAGPRCASCFDVISASAGKGLTGQWT # ORIGINAL: g4353.t1 original gene structure, not modified by PASA NODE_207_length_31583_cov_44.0937 AUGUSTUS gene 4799 9756 . - . ID=g4353;Name=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS mRNA 4799 9756 . - . ID=g4353.t1;Parent=g4353;Name=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 9691 9756 . - . ID=g4353.t1.exon1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 9691 9756 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 9435 9558 . - . ID=g4353.t1.exon2;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 9435 9558 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 8961 9136 . - . ID=g4353.t1.exon3;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 8961 9136 . - 2 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 8581 8693 . - . ID=g4353.t1.exon4;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 8581 8693 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 7940 8036 . - . ID=g4353.t1.exon5;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 7940 8036 . - 1 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 7162 7231 . - . ID=g4353.t1.exon6;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 7162 7231 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 6969 7006 . - . ID=g4353.t1.exon7;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 6969 7006 . - 2 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 6731 6880 . - . ID=g4353.t1.exon8;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 6731 6880 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 6503 6548 . - . ID=g4353.t1.exon9;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 6503 6548 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 6162 6258 . - . ID=g4353.t1.exon10;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 6162 6258 . - 2 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 5724 5853 . - . ID=g4353.t1.exon11;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 5724 5853 . - 1 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 5096 5600 . - . ID=g4353.t1.exon12;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 5096 5600 . - 0 ID=cds.g4353.t1;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 4799 5004 . - . ID=g4353.t1.exon13;Parent=g4353.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 4799 5004 . - 2 ID=cds.g4353.t1;Parent=g4353.t1 #PROT g4353.t1 g4353 MSELLCAPEATGQDDEQSGDDRVILSVVWKAGKLGAAYYEVETGHLRILNDVSESGCFEYLRSGNVEDADAPLQILPSTDFNMESCRVRLLNMDLASFAADLTPKEREMQISGLIDFQAHQMVIRLFSLDQQRPSPRLSSLPAPRHDRNDYMVLDEDALRERLDAISDFVDPRQRDIVDGLRRSLSGVRNLQFDHVESTNQGRFVVKPDVDEDLDEMKKVYTGLPDFMTKVAREEMACSSLDECNVVYFPQIGYLVAVPRKATQQTEEDFHIPGFEFQFVTKNAVHYKSVRTRDRETEIALTVQSKVLAATDILERTGDLLAELDCRHPLQELSVGAFIPNNFEAQTNCNRLHVVTGPNASGKSIYIKQVALIVFMAQVGSFVPAESATINIRDRIFTRIQSRESVSVAQSTFMIDAIQVSSVLRSATPRSLVVIDEFGKGTGSGDGVALLAATVRELLRRGSDGCPMCMISTHFYELFTEGLLRQSSPERAPLLKLSHMEVMKETSDLVFLYQAVDGCSTDAHGCRVAAAAGLPDNIVERGRLVSRTLDGSDTIVPQIPHEMAVRFQISDAIVQAFDTFDLDVAPLTELTSLVSRIKEHLTAKA* # PASA_UPDATE: g4354.t1, single gene model update, valid-1, status:[pasa:asmbl_3445,status:12], valid-1 NODE_207_length_31583_cov_44.0937 . gene 10187 12349 . + . ID=g4354;Name=g4354.t1 NODE_207_length_31583_cov_44.0937 . mRNA 10187 12349 . + . ID=g4354.t1;Parent=g4354;Name=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 10187 10372 . + . ID=g4354.t1.exon1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 10187 10372 . + 0 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 10552 10775 . + . ID=g4354.t1.exon2;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 10552 10775 . + 0 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 10901 11086 . + . ID=g4354.t1.exon3;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 10901 11086 . + 1 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 11406 11604 . + . ID=g4354.t1.exon4;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 11406 11604 . + 1 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 11689 11769 . + . ID=g4354.t1.exon5;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 11689 11769 . + 0 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . exon 11859 12349 . + . ID=g4354.t1.exon6;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . CDS 11859 12341 . + 0 ID=cds.g4354.t1;Parent=g4354.t1 NODE_207_length_31583_cov_44.0937 . three_prime_UTR 12342 12349 . + . ID=g4354.t1.utr3p1;Parent=g4354.t1 #PROT g4354.t1 g4354 MVFVCASECRMRLAGVFLATLTLALANSDSSGTVLPAGAAESEPESVVEQIPRIRIAVIGAGVGGRVSAVYLDEGKITTKPGRGRRIELGASIIHVKNEMMANYTDDLGLTRCKPFENEDFGVLEGSLLVYSSQSSSAILSALRALWRYGLNPYWASNIADELVSRFVGIYERTSPFRSIEEELDSLGLLETVNISASDLFDVCEGNEKVPEKLISRSGASLRLRTRVETVRRRENGGFRVEFTDLETGNTDYDFFDGIIIATPLETSTLDIGQLDLSEVIPTRPYETLHVTLISGNIDPQSIGLGSDEMPPAHILTSGKGAAVPFLSSSLVVPENGSTTRGVHKLFSHSKLGPTFVEKYFPGGTVLFETAWKAYPTLRPFTIQKPPPIVLTCGVVYANAFESVFSAMEAASIAGANAANLIETMFMNAESACRDIVELKAEFHSQQAHEEL* # PASA_UPDATE: g4355.t1, single gene model update, valid-1, status:[pasa:asmbl_3447,status:3], valid-1 NODE_207_length_31583_cov_44.0937 . gene 12944 13990 . + . ID=g4355;Name=g4355.t1 NODE_207_length_31583_cov_44.0937 . mRNA 12944 13990 . + . ID=g4355.t1;Parent=g4355;Name=g4355.t1 NODE_207_length_31583_cov_44.0937 . five_prime_UTR 12944 13003 . + . ID=g4355.t1.utr5p1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . exon 12944 13011 . + . ID=g4355.t1.exon1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . CDS 13004 13011 . + 0 ID=cds.g4355.t1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . exon 13096 13179 . + . ID=g4355.t1.exon2;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . CDS 13096 13179 . + 1 ID=cds.g4355.t1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . exon 13286 13356 . + . ID=g4355.t1.exon3;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . CDS 13286 13356 . + 1 ID=cds.g4355.t1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . exon 13459 13533 . + . ID=g4355.t1.exon4;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . CDS 13459 13533 . + 2 ID=cds.g4355.t1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . exon 13755 13990 . + . ID=g4355.t1.exon5;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . CDS 13755 13825 . + 2 ID=cds.g4355.t1;Parent=g4355.t1 NODE_207_length_31583_cov_44.0937 . three_prime_UTR 13826 13990 . + . ID=g4355.t1.utr3p1;Parent=g4355.t1 #PROT g4355.t1 g4355 MADLQAERKLRDNQARISLNQKLAESGERERLKELLHQRLTESGWRDELKAYCKEVVKSKGLERVTVEDLIAEVTPRARATVPDEIKAELLARIKEYVSQVA* # ORIGINAL: g4357.t1 original gene structure, not modified by PASA NODE_207_length_31583_cov_44.0937 AUGUSTUS gene 16934 31583 . + . ID=g4357;Name=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS mRNA 16934 31583 . + . ID=g4357.t1;Parent=g4357;Name=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 16934 17467 . + . ID=g4357.t1.exon1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 16934 17467 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 17578 17778 . + . ID=g4357.t1.exon2;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 17578 17778 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 17941 18163 . + . ID=g4357.t1.exon3;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 17941 18163 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 18307 18575 . + . ID=g4357.t1.exon4;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 18307 18575 . + 2 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 18754 18872 . + . ID=g4357.t1.exon5;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 18754 18872 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 18970 19171 . + . ID=g4357.t1.exon6;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 18970 19171 . + 1 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 19322 19558 . + . ID=g4357.t1.exon7;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 19322 19558 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 19657 19806 . + . ID=g4357.t1.exon8;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 19657 19806 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 19900 20035 . + . ID=g4357.t1.exon9;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 19900 20035 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 20178 31159 . + . ID=g4357.t1.exon10;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 20178 31159 . + 2 ID=cds.g4357.t1;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 31401 31583 . + . ID=g4357.t1.exon11;Parent=g4357.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 31401 31583 . + 0 ID=cds.g4357.t1;Parent=g4357.t1 #PROT g4357.t1 g4357 MEHPRSSGAAGPAVVVTGDAPGNASNNDGGAHGAPSPSAKQSTVPSVAAGARTARGPLPSAGSGPPSATKPLLDPNTAALNRRRTLSVSKVIAASHLTKKRDERIRQARKTVDDRHRYIFERIGAYLFLETPAIEFSILAREDLLSAVNDLLRPSDSDAAVAHVPPVFVHATGSQGDKDAVVVSTKPTALATQRSVVIMRVAHNIVSFANIHEALSFGEINGGMELLDSLRWSVGGLFASSLGAQAKWGRLDRSSVRDAAVMRDLVEGLRQFDAVIGRSLDCIRGCVALEPPSGLALIGCAPADIVAAASSAEVVGACEALLERWRGEIEALLNSASQLRRESEGMGPESELDHWKGRMLAFNNVTEQLRQAERKSVVAVVRAARPKSSTMARWRETDTRVTDAANEAKDNVKYLYTLGRFLDPLYECDPSRMVDTLPGLMSAISMMYSIARYYNTSEQMTALFGKITNQMVLCCKAFLLAPGADLWSVDRQSFLDKCDACIALNRAYQNAYHDARETPGGRKFDFSEASIFGRFDAFCKRLGVVCSVFRSVARFESLLPLAQTHETLEPVVVRFKTAMAEMRQVAGHPLDVKNAAFDSAAATFLINFAGLEEEIQASVTRALSEAPSTESAIALLGALRGGVLADAMERWMTVVFDHFLRDLDVVTHSYERYKEKPPIARDMPVVAGSIAWARHLMRKIEDPMRILREFDAVLHTDDGRRAVKRYNRVMGILTQFELLWIDSWSSRTRGVLGALSVTLLVCNPADGALLVNLDPVLLEALREACAMEKMGVELPHHALFLCEQGRRVKTLAVRLAQLCGRHQRIVASVPRELAGLFAPHMRRLERAFQPGITVITWMSARIDDFFASAEAQVDLVEECLRRTLDARNCRMKAVLAEVGAMRVWESDDALAAWAVARLYAPNELSLAESDLPTFEAFVHAVDRSVGSVAAGINNRIAAAENASKDVLEVITSSYDVDEMASVADHVPLFHQRCGAKALKALLRCIKGSVDTLKRQLDYRDAGAARAMTLAIASSLEVSAADLTASQGGADLTGGGAGGVQDGQSAHGDRDSASWRVPLFRAEAVLSTPHIAMQPPPEEVHASLIRLAQLILSLPRRVRQWGCPLSFAQLESQRARRNSQDGLALPSAVAAPAAGLSSAPAALDTAPSSDQAGAAPVQQSAVSSAAEADLANFVRPSRGGFYGDLVGKEHEVASFSLVLSSASGHMRAVLADNLLMFRPFEFLWRRNPSADLDAFVADNPSVSDFETEMRRYADMERAILTFPRAVVVGPVVVDMDNAVRALAASARAWREGLGDRLRRRAHAELDDLCAFMDAKQRVISTLCDAKCPDLAIVRDVMRHMSELRFVWPDAEVRIAPIEDAYALLGRLDVDVSQEETDRVGELRYSWSKLHIAAAETANFLLSVQPALGSTLETTAQELAAEVAVFVADYDARGPLSRGTPRRIALERTRGFTAQLEKIDRRAEDLWEGQRMFGASLSEFADVARIRRDLRLSERLFSLYDAVQASIVRHAEMPWAAVDVTLLTDQVAEHLAKCRSLPRAVREWRACTELRSTLETWSAALPLLVRLRSPAVQPRHWEATFALAPHPPTKPVADLLVRDLIAAGLSERADDIEELLHAAQREMEIETRLRTISADWTLREFEVVPFKGRGGVLLGAASTKDTMQALEDALVVLASLSANRHNAHFRTSISQWILKLSTANEVIDRWMEVQNMWVYLEAVFCGGDIARQLPAEARRFMSIDRAWTAMMKRTAEVRNVVALTAAGEDAGGVPRQLPGLLDQLELCQKSLAGYLEKKRTVFPRFYFVSDPPLLEMLGQTADPSAMQSHFRSIFDNVQLVEFDGAQREWIVALFSAEGERLPLTAPVVAAGNAELWLDVLVKGMQGAMQDVIRRVCVDAQERSLPDIVADYPAQAALMAVQVLWTRLCEDAISRARTDRQIMKQTNTRIAELLSSLVGLAMRDLSPRERTKIETLITIQVHQRDVFDKLVADGVRSIVDFEWLRQARFYWESDRDDCFVAIADAEFRYQHEYLGCTDRLVITPLTDRCYVTLAQAICLCMGGMPLGPAGTGKTETVKDMGRALGKYVLVFNCSDQMDYRGLGRIFKGLAQSGCWGCFDEFNRIELPVLSAAAQQIACVFSAKRERVKSFVFTDGDSVSLNPELGVFVTMNPGYAGRQELPENMKMLMRSVAMMVPDRQIIIRVKLASCGFQKSVVLARKFYVLYALCEGQLSRQRHYDFGLRNMLSVLRACGAARRANPSLPESVVLMRVLRDMNLSKLVDSDGPLFLSLVADLFPGQAIASDSHPELEAALALQAAEDGLVVEEEWKRKALQLYESSLVRHGLMVLGPSGSGKTACIRTLLRALTRMGRAHKEIRMNPKAITAPQMFGALDVATNDWTDGVFSALWRKAAKGGRRDEMWITLDGPVDTLWIESLNSVLDDNKILTLANGDRIPMPANLRLVFEVSSLENASPATVSRAGMVYMGETSLGWRAVFQGWCSRRNPEESKALVALCDRHVEALWAFVQGELHPRMDLRLPNQIGCLTDLLDAILPPAGDDDGLLSAANGGSAARPHHASTAAAEAEASAGDRRLGRLFSFALAWAFGGVLEEDDRRRLHVTMRDRGLDVPGCDADHRPSVSSFPLVPASPTVSVSGDVRVSFEVSASSSKLRLSQASATSLASASSSGIPPVDAGQAATPTVFDCCVTAGGEWRRWIDDIPQWSFPAVPAVDFYSLYVPTAESARTEALIELLSRRQRAVLLIGESGSAKTCIIERFLAQQESAGNLARTISFSSATTTTTFQRAIEAGVDKRVGNTYGPRGGRSMTIFLDNVNMPEINAWGDQPTNEIVRQLAEQRGFYSLERPGEWKHVTDIGMLAAMMHPGGGRNDIPQRLKRHFFPINCALPEDASIDRIYGALVGGYFTPQRGYSRIVCSTAPALVPLTRKLWQAAKGKLLPTPNKFHYTFNLRDLSRIVQGILRSHPATVSTSEQLFALWGHECARVIGDRLVSSDDSTWFASTLSRIASQAHGAASASMACDDSVCFANFMRDPPDDDQDDETVHAHHTMLTPSPNVYTPAGNPLHSPSSYFSTASAVYSSTPPTPMPIVREQADLCAPVPIAPYELARLEDVRERLGLLAARRSESVRGPHPQIVLFDDAVRHIARIARILSCDRGHALLVGVGGSGKRSLAKLAAYVAGHELCILSSGALYGPSNFLDDVRPAIRKTGEKGVPTTLLFAEDNARDGSVLELLSSFLATGEIPGLFAQEDADQIASDVGQVLRRERPDAADTPQAALRFFHERVRAHFHVVLCFSPDGAGFRSRALKFPSLVSACVMDWFNAWPAEALEAVAGNFLADFNPLTADAGKVRAGLVNHLANTHATALEASREFYERFRRQTFATPTSFLSFISAFKTVHGRLVAGISDTVGRMRTGVERLEEATKAVALLQQELGMKEKDLARAQEAASVTMAEIQAGAVAAELKRNEVLKEKERLAEMAARTAGDKRIAEARLEAARPALERAEKALNQLRAQDINTVRNLRRPPELIQRIMDAVLLLLRRRLDSVQAPTKDSPGGIIASWKESLLVMGQSTFLASLVAFDKDSINEEMCELMEPYLSAEDFNYERARMSCGDVAGLCAWVRAMVEFYAINRDVIPLKDAVRVAEARQREALASLAAAQKELDDRQAALDVMRETHAEAVRHTSALAAEAEGCRKKISVAVALTGGLAGERERWRATSRALERELGLVVGDAALCAAFLTYAGPFSQEFRQRLLNKWRVDCDRQAVPRRQDKDVVSLLTDAHALSQWQLQGLPADEQSSQNGVIATHSPRNPLLIDPQGQGRAWIRRKEADNLLGVTKFGAKDYMTKLEECLLLGRPLLVEDVGESIDASLENVLAGNFLRAGRLLKVVVGDRELDYDPAFRLYLATSLENPRYMPEVFARLAVINFAVTSHGLEEQLLGRVILAERAELETERHALLASVSANKKRALDMEADLLQRLSTGDGRSLLEDESMVFALEESRKTAVDIREKLRVAEETERKINSAREEYRTVAMRGSLLYFAATELSAINPMYQGSLRQFLDVFDRAIASLQGAAAGPVVGGRTKAMSDQVTWFVYQRIARGVYAIHRPLFLINVALKIGLQSGRMDVDECAFFVRGGTSVDPAALPKRPYAWMPDASWQNLCALAKLRLFGTIIERIAANEKGWRRWFALDAPESQACPDPTYAAHDPLRKLLLVRAMCPDRTLPAAEHVIAETFGPQYNESPAVDVDALADEASPAVPLLGLLSQGSDPSAMVEAAAKRRKVDCRTVSMGQGQEAVAREFLRTLIASGGWLLLQNCHLCLPFLEEIVASVGTHKGAHAAFRLWVTAEPHPSFPVVFLHACIPFTNEPPQGIKVRAHWCGGGG # PASA_UPDATE: g4356.t1, single gene model update, valid-1, status:[pasa:asmbl_3446,status:3], valid-1 NODE_207_length_31583_cov_44.0937 . gene 14656 16236 . - . ID=g4356;Name=g4356.t1 NODE_207_length_31583_cov_44.0937 . mRNA 14656 16236 . - . ID=g4356.t1;Parent=g4356;Name=g4356.t1 NODE_207_length_31583_cov_44.0937 . five_prime_UTR 16172 16236 . - . ID=g4356.t1.utr5p1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . exon 16060 16236 . - . ID=g4356.t1.exon1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . CDS 16060 16171 . - 0 ID=cds.g4356.t1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . exon 15815 15934 . - . ID=g4356.t1.exon2;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . CDS 15815 15934 . - 2 ID=cds.g4356.t1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . exon 15585 15676 . - . ID=g4356.t1.exon3;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . CDS 15585 15676 . - 2 ID=cds.g4356.t1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . exon 15128 15407 . - . ID=g4356.t1.exon4;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . CDS 15128 15407 . - 0 ID=cds.g4356.t1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . exon 14656 15002 . - . ID=g4356.t1.exon5;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . CDS 14764 15002 . - 2 ID=cds.g4356.t1;Parent=g4356.t1 NODE_207_length_31583_cov_44.0937 . three_prime_UTR 14656 14763 . - . ID=g4356.t1.utr3p1;Parent=g4356.t1 #PROT g4356.t1 g4356 MGHTTTEANAGPTAHVPVIAGGRNHAGAKILAGQYTEGKRRLEIFSVATCMSLTSLVFYFLWRDFERANLLGLFVCAGLGVLSADFLSGLLHWAADTWGSVELPLIGKAFIRPFREHHIDPTAITRHDWIETNGDNCMTTIPVLAATIAVCLSKSDMVGANKSTYFIVSYLFALCIFVTLTNQIHKWSHTYRPAAWVRVLQSMHIIMPRRHHRIHHVSPHDCYYCITTGWLNYPLEAVGFWPRLESIIEHLSGVGAREDDLKWAKMGADDKDAKSHAIAK* # ORIGINAL: g4351.t1 original gene structure, not modified by PASA NODE_207_length_31583_cov_44.0937 AUGUSTUS gene 327 1762 . - . ID=g4351;Name=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS mRNA 327 1762 . - . ID=g4351.t1;Parent=g4351;Name=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 1631 1762 . - . ID=g4351.t1.exon1;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 1631 1762 . - 0 ID=cds.g4351.t1;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 1181 1383 . - . ID=g4351.t1.exon2;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 1181 1383 . - 0 ID=cds.g4351.t1;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 704 916 . - . ID=g4351.t1.exon3;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 704 916 . - 1 ID=cds.g4351.t1;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 327 517 . - . ID=g4351.t1.exon4;Parent=g4351.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 327 517 . - 1 ID=cds.g4351.t1;Parent=g4351.t1 #PROT g4351.t1 g4351 MADDGAACACEDCKLQGTIRSTRFGRSPLFWAYLYRSPKTVQQLTEGLRYDVDDSRLCTHLRGKFVRLSADDGTRVFLAEAERKSWSVCAHYTCSAVKLLCGGFMSVTSINGLLGRGSMHVLSHAHACTLLGRTAGDAPVGRCLDVGAGDGHVTDELRPLFREVVCTEASAFMSWRLRQRGYTCHRVLDVADPAIDGQFDVVSCLNVLDRCDSPSDLLVKMRARLVPGTGRILLAVVLPFKPFMES # ORIGINAL: g4352.t1 original gene structure, not modified by PASA NODE_207_length_31583_cov_44.0937 AUGUSTUS gene 2374 4747 . + . ID=g4352;Name=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS mRNA 2374 4747 . + . ID=g4352.t1;Parent=g4352;Name=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 2374 2502 . + . ID=g4352.t1.exon1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 2374 2502 . + 0 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 2646 2686 . + . ID=g4352.t1.exon2;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 2646 2686 . + 0 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 2861 3014 . + . ID=g4352.t1.exon3;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 2861 3014 . + 1 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 3222 3326 . + . ID=g4352.t1.exon4;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 3222 3326 . + 0 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 3447 3739 . + . ID=g4352.t1.exon5;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 3447 3739 . + 0 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 4093 4247 . + . ID=g4352.t1.exon6;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 4093 4247 . + 1 ID=cds.g4352.t1;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS exon 4434 4747 . + . ID=g4352.t1.exon7;Parent=g4352.t1 NODE_207_length_31583_cov_44.0937 AUGUSTUS CDS 4434 4747 . + 2 ID=cds.g4352.t1;Parent=g4352.t1 #PROT g4352.t1 g4352 MDGSAHATLASLSVVDVTVDNIGDLECAIRAAISGATFIAIDTELTGLGSRAATTATSVDDRYRALMQSASTRALVSLGVACFKKHASQTSLASAYDVAVFNIYLLCQEDHVVEPKSLRFLANNGFDFNTQITKGLPYWPGNDARSGEKGRTAGARGSAATVRSLFSSILRARIPVVLHNGLIDLAFVHHHFIAALPQSLATFTADAAALYGPSKLYDTKYIAEFKSRHPASFLDYLFRKALSSSLSPLQCHGFCAASTCAKSHCLDRILDAEEQKAAARRSRKRRRSGRSVDTDGAPLAAQSPPAETGMATESVPDAAYKADSAHSHRAGFDAFMTGFVFAVDMAVHGEAVLQDSANRVCLSGKSFPLVITRSAFTSVSPQCKDKLQTLNMSTHD* # PASA_UPDATE: g6481.t1, single gene model update, valid-1, status:[pasa:asmbl_1083,status:3], valid-1 NODE_1285_length_12409_cov_43.2741 . gene 1017 6866 . + . ID=g6481;Name=g6481.t1 NODE_1285_length_12409_cov_43.2741 . mRNA 1017 6866 . + . ID=g6481.t1;Parent=g6481;Name=g6481.t1 NODE_1285_length_12409_cov_43.2741 . five_prime_UTR 1017 1244 . + . ID=g6481.t1.utr5p1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 1017 1502 . + . ID=g6481.t1.exon1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 1245 1502 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 1976 2089 . + . ID=g6481.t1.exon2;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 1976 2089 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 2364 2485 . + . ID=g6481.t1.exon3;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 2364 2485 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 2873 2999 . + . ID=g6481.t1.exon4;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 2873 2999 . + 1 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 3503 3600 . + . ID=g6481.t1.exon5;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 3503 3600 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 3873 3994 . + . ID=g6481.t1.exon6;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 3873 3994 . + 1 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 4308 4432 . + . ID=g6481.t1.exon7;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 4308 4432 . + 2 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 4750 4824 . + . ID=g6481.t1.exon8;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 4750 4824 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 5159 5230 . + . ID=g6481.t1.exon9;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 5159 5230 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 5411 5500 . + . ID=g6481.t1.exon10;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 5411 5500 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 5670 5819 . + . ID=g6481.t1.exon11;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 5670 5819 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . exon 6254 6866 . + . ID=g6481.t1.exon12;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . CDS 6254 6433 . + 0 ID=cds.g6481.t1;Parent=g6481.t1 NODE_1285_length_12409_cov_43.2741 . three_prime_UTR 6434 6866 . + . ID=g6481.t1.utr3p1;Parent=g6481.t1 #PROT g6481.t1 g6481 MASATQTRAASTCNTASLTGPLPAATTNTTATNAARIHVRSRDHRRHHQSGNTSLAGAGSSSSSIASYASLPSAEHSRATLSKFAVTATRGEAMIDRMLPAEVMLQILQYLDVVMLCRCAQVSRYWNTLALDGSVWQNIDFFSFQREIRDSVVTSISRRCGGFLRRLSLSGCEKIDDGAFTAFADNCRNIEELNLNGCRQLTNATIQSVGRHCHELRRLCVSNCKNISDTTCAALGSGCPALEELDLSWCDKVTSIALGYVASGCPSLRVLKLRGCSRITDDGLARLADGCKRIRSLNLYYCKLITDAGIARLAAGCTSIEKLCLAYCNLITDSSLMSLAKSCTELRTLEVANCQRLTDNGFHHISNHCHKIENIDAEECVRITDLTLKHLGRGCWALQSLVLSYCERLTDEGIQHLSTGCTDLRTLELDNCVLLTDTTLLHLASCQHLVKVEIYDCRNISSGAVRAFQSRGAGKTVQVRSFFIPAINGDDDDGEGSDRHRRTLCPCTVL* # ORIGINAL: g6482.t1 original gene structure, not modified by PASA NODE_1285_length_12409_cov_43.2741 AUGUSTUS gene 8147 12362 . - . ID=g6482;Name=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS mRNA 8147 12362 . - . ID=g6482.t1;Parent=g6482;Name=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 11961 12362 . - . ID=g6482.t1.exon1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 11961 12362 . - 0 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 11653 11872 . - . ID=g6482.t1.exon2;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 11653 11872 . - 0 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 11219 11325 . - . ID=g6482.t1.exon3;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 11219 11325 . - 2 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 9962 11142 . - . ID=g6482.t1.exon4;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 9962 11142 . - 0 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 9689 9739 . - . ID=g6482.t1.exon5;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 9689 9739 . - 1 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 9414 9548 . - . ID=g6482.t1.exon6;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 9414 9548 . - 1 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 9075 9128 . - . ID=g6482.t1.exon7;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 9075 9128 . - 1 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 8740 8874 . - . ID=g6482.t1.exon8;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 8740 8874 . - 1 ID=cds.g6482.t1;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS exon 8147 8492 . - . ID=g6482.t1.exon9;Parent=g6482.t1 NODE_1285_length_12409_cov_43.2741 AUGUSTUS CDS 8147 8492 . - 1 ID=cds.g6482.t1;Parent=g6482.t1 #PROT g6482.t1 g6482 MVTGTLTIVKNLHSLVGLDNLCVIGGHLVVSQTQLPDFQGLHGLRALGGALVVFDNNQLQSLRGIEGLRGAIGGFAAGRNPVLSSLGTIGGSRLLDAGGVRALNSAAARVFADKALMAALGANYHVNGTFNATAVGTDTILPNDLALYIEDNSALPALMGFEGLLCINGSVVIRKNRQLCMYVDPSAWSVLGASSAVIQDAQGRGLCGTCPKSCNKLGCWATSGQFCLVCEANGLPVSIGGVGGSLGPSNGVVAAIVLASVLAPTLVGLVAMFLYKRRKLRKDDATSLGATAGNPYIEKILRDPRYGAVVGALKLAPPEGRFEVAVAMGECIDAIQSRELPRSAVTLEYVLGRGEFGVIYSAQLDYAVVDGERSADAGVARDASRQQHSAAAPSKKSRFSRARAAKSSFSTTTATAASNGNNSNTGNSTSTGAASDAPLFRKRETGTASSSVSASTWSSNDSALVSDMTRPVRMPVVVGRGGSGAFSTVSRMATRVSDDSCADDGISASPSMPRRQQGIMEGVDAVGGVYATPNANLDGSSSSSSPPSPTSQTVHVAVKTVSEHATLDELRSILEEARLMAGLDHPHVLRLVGVCTSGPPLFVITELMECGDLRAFLRGRREAGRFLSPRELVGICGQVADAMDYLGRNKCVHRDLAARNILVAGDGATVKVADFGLSRALHDSEYYRKIGLAKMPIKWMAPEAINDRKFTPASDVWSFGVLCWEVFAHGATPYPLFTNAQTVEQVATGYRTQPTLNCPAEVHSLLMRCWDGDENNCPTFSAIYTALNTVMAYADKEPMSPLGPGVHAHLPAANSFDSGGDQPFGLRGGLGPDRASDFGLVAGMNSTHKYVWTDPALLSFAPLLPWRQSPDCQWRW* # ORIGINAL: g2691.t1 original gene structure, not modified by PASA NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS gene 298 1083 . + . ID=g2691;Name=g2691.t1 NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS mRNA 298 1083 . + . ID=g2691.t1;Parent=g2691;Name=g2691.t1 NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS exon 298 427 . + . ID=g2691.t1.exon1;Parent=g2691.t1 NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS CDS 298 427 . + 1 ID=cds.g2691.t1;Parent=g2691.t1 NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS exon 592 1083 . + . ID=g2691.t1.exon2;Parent=g2691.t1 NODE_5005_length_1083_cov_45.5317_potentialcontaminant AUGUSTUS CDS 592 1083 . + 0 ID=cds.g2691.t1;Parent=g2691.t1 #PROT g2691.t1 g2691 YSVTQNRLPQSDATLRLVMTLTKLEEAGLNPSDVVTALVSYFKETAGYASSGSSASTSAMNSVNTRLVSQQGLAVIGALAGRDFSAFQSGGGNGGGGAIEDESLSLTDIPGRFRELQEALGEAIRARDRAEQRVAVLEGETARAQEDCRMHAAVALQSEATVADLERQLLLVSSSSGRGAHAQQQQQQQQQQQQQQQQQQQQSRYLE # ORIGINAL: g242.t1 original gene structure, not modified by PASA NODE_2968_length_4629_cov_34.6579 AUGUSTUS gene 46 4492 . + . ID=g242;Name=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS mRNA 46 4492 . + . ID=g242.t1;Parent=g242;Name=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS exon 46 2773 . + . ID=g242.t1.exon1;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS CDS 46 2773 . + 0 ID=cds.g242.t1;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS exon 2968 3078 . + . ID=g242.t1.exon2;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS CDS 2968 3078 . + 2 ID=cds.g242.t1;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS exon 3306 3613 . + . ID=g242.t1.exon3;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS CDS 3306 3613 . + 2 ID=cds.g242.t1;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS exon 3839 4082 . + . ID=g242.t1.exon4;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS CDS 3839 4082 . + 0 ID=cds.g242.t1;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS exon 4353 4492 . + . ID=g242.t1.exon5;Parent=g242.t1 NODE_2968_length_4629_cov_34.6579 AUGUSTUS CDS 4353 4492 . + 2 ID=cds.g242.t1;Parent=g242.t1 #PROT g242.t1 g242 SIPESDSHAYLVWSALYTASTVLFFTFVKVSNILLHRAFDKLASVPDEVRLDDITSLPTDPTSYGRYSSSQSQLQSALSRGPPPPPPPSGDPNALAGGIRRRRIAAPRRSAVARRRQRNSISEPEGNIEVTVLDESAIVGVGDADDLSGASGIVTSGGVGVDAISRGKSDWEKPSSADVSSSLVSAPSGGSFTFAAVALERQRSRPRSRTGQNVPRDGLRELEVLSMHSMEDGGGIDSPSIVMETGRTSRTHNDSDGDLGLGFERLRTVARQVSNEYSKGRSASVVRDEGMDGSRTRKEAHGEAVDKGKGKRPASPSSERSDNDSMDITFAHRAPTSIVVGVDGGGASSSASVVTHVVQTTHARVEEKPVTRRRDSVGSMDTRSVSLRIDDVATNSRDGGGRVKLQMQSLSGEGVHAEMNGETSTTSDGQHSAAVLHVEPIEGASGQKSGRSNNSVDVNSVGDKDTSGRRAIGGSVSSMIALPPPHHQREGSHTSGEYRSASEQLQVESVRTPHPVTHRDPSIRSFGAASMHGTLVDALSAADSDATSRVHYYDDMSIGTGMGVDCRSNADAKSLTMRGHGDGRHDGDSEEDEGADGDDEDDVHDQDELPGLGVASSSVIRQNESTGDAEGRPRSKTSSFRREHADAGTSAAGGDGFHDVALDSVEVVVAEVQDAWVSAYLSGSAGKHMTAFRENSVNEEDDVLGGFGRRSDSLSIAPATAASMLSGVSVGESMDRSASRSGNWHSIYSTSSSVASRMKSTSRQLKLLAPLSDVTVGVDFDRLALQQMLDRDAGIVHSLACIALAGAVSGFACALAPHYTGFSVGLMWFVVASCHYALLKCPQPDSASPALGVDTHVTSLSRSAYFSAIALCIILLRGLDCAGGCNMFTMYDVPLLSLGVVNFMALVLQVVILAFPAIFLLGLLPQIKTFVFYALEQTDVHLLGGTGSASLSASAYSVLKCAIVTAICAPLCASALHPTGGDRPGETKTFSAYVGLIVGLSHLLSKRPSSVVTAWSSSFGNVFRACAAVGARVQGSSAEAPAVFPRLSVSLRLVSDVLSAVVIGVAYFLLHLTGCFTALQPVLKTTIVSVAAAVGFVSHYVGPQLRKRHPFLLIAQPLLRSAEYGKFEPGGAAKLVWFERVYVCAVWVEKHVLYPVIFVGALANDIESFAFKLHWT* # ORIGINAL: g3632.t1 original gene structure, not modified by PASA NODE_2574_length_5834_cov_41.4706 AUGUSTUS gene 80 1137 . - . ID=g3632;Name=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS mRNA 80 1137 . - . ID=g3632.t1;Parent=g3632;Name=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS exon 1099 1137 . - . ID=g3632.t1.exon1;Parent=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS CDS 1099 1137 . - 0 ID=cds.g3632.t1;Parent=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS exon 557 645 . - . ID=g3632.t1.exon2;Parent=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS CDS 557 645 . - 0 ID=cds.g3632.t1;Parent=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS exon 80 253 . - . ID=g3632.t1.exon3;Parent=g3632.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS CDS 80 253 . - 1 ID=cds.g3632.t1;Parent=g3632.t1 #PROT g3632.t1 g3632 MDETVLLESLLKWLRTFDEISGRRETAEEVSDGVALCEIMAQIAPERLDVSNVKRDAGANWRLKLSNLKKLLMAVTDFYEDVSGIIIHALLAVSLGLHVA # PASA_UPDATE: g3633.t1, single gene model update, valid-1, status:[pasa:asmbl_4572,status:12], valid-1 NODE_2574_length_5834_cov_41.4706 . gene 1983 4733 . + . ID=g3633;Name=g3633.t1 NODE_2574_length_5834_cov_41.4706 . mRNA 1983 4733 . + . ID=g3633.t1;Parent=g3633;Name=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 1983 2222 . + . ID=g3633.t1.exon1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 1983 2222 . + 0 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 2391 2793 . + . ID=g3633.t1.exon2;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 2391 2793 . + 0 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 3018 3197 . + . ID=g3633.t1.exon3;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 3018 3197 . + 2 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 3356 3441 . + . ID=g3633.t1.exon4;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 3356 3441 . + 2 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 3610 3716 . + . ID=g3633.t1.exon5;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 3610 3716 . + 0 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . exon 4071 4733 . + . ID=g3633.t1.exon6;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . CDS 4071 4632 . + 1 ID=cds.g3633.t1;Parent=g3633.t1 NODE_2574_length_5834_cov_41.4706 . three_prime_UTR 4633 4733 . + . ID=g3633.t1.utr3p1;Parent=g3633.t1 #PROT g3633.t1 g3633 MPPRTAVAAEVEGIFLAIHQRIATAYVTRFSASSRRFLEFLSFAAAVGTLSLLVFLHVSFVTNASCLQHRIHATNMTHVEVLRIRIQSEIGHIATAAYSAAVGAVAIDVGGDVGAVVAHAVNEAPRVLGNGHVASFVRSLDAVYEYSRERGFLMLGEDARLRRGVVVGEIVVRSGLGGDYDACVGGPLVRAVLECAVSFDSAVLSAVIGATAGPGYVLSQSTGETFFLGTPAQRASPFSFKANVVGSAFFLFFATTTLVALVLRETQLRMLKFTMALQQLSRQGFPIGFVLVSHTYKSLCFLLVLVGISYFLTDLLQDQVLAFCVLFVVWLSELFTVVCARTMTTIVYWPKFYLVYQLAFYVYLFAFPYAFTYLALLTAAAFIAHAMAYFYNACELPALRTGEVSRATPRAMPYGTAPPIMGALRVIIPAQALVHHHVTPSAVPTVASGLAMPTQPPLPLDTPLLGDDAQPPQQQQHLGMASEGAHVTHSRPHSVDTLGDVMSRDVAVDDSGANAGAQGLQTLIY* # ORIGINAL: g3634.t1 original gene structure, not modified by PASA NODE_2574_length_5834_cov_41.4706 AUGUSTUS gene 4998 5615 . - . ID=g3634;Name=g3634.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS mRNA 4998 5615 . - . ID=g3634.t1;Parent=g3634;Name=g3634.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS exon 4998 5615 . - . ID=g3634.t1.exon1;Parent=g3634.t1 NODE_2574_length_5834_cov_41.4706 AUGUSTUS CDS 4998 5615 . - 0 ID=cds.g3634.t1;Parent=g3634.t1 #PROT g3634.t1 g3634 MPNADGSLPVVSHDDAPPYYRDATPEDARELSRMVNSAFEVESRFLKVDGRGRIAEDELWELIAAGECALICMCQAATGRVLGSILYKDIWARPSTSAAAATDGTGNASAGYLGMLAVWPHLQGRGLGAALMRQAEQRAVSRGHRVMQLNVISARLELFPFYEKQGYAFSGEREEWDADDLRHVRPEQHSSYFRIMLKPLPSASA* # PASA_UPDATE: g12743.t1, single gene model update, valid-1, status:[pasa:asmbl_6056,status:12], valid-1 NODE_3429_length_3494_cov_35.0085 . gene 373 3308 . + . ID=g12743;Name=g12743.t1 NODE_3429_length_3494_cov_35.0085 . mRNA 373 3308 . + . ID=g12743.t1;Parent=g12743;Name=g12743.t1 NODE_3429_length_3494_cov_35.0085 . five_prime_UTR 373 374 . + . ID=g12743.t1.utr5p1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 373 432 . + . ID=g12743.t1.exon1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 375 432 . + 0 ID=cds.g12743.t1;Parent=g12743.t1;5_prime_partial=true NODE_3429_length_3494_cov_35.0085 . exon 682 726 . + . ID=g12743.t1.exon2;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 682 726 . + 2 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 1015 1171 . + . ID=g12743.t1.exon3;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 1015 1171 . + 2 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 1421 1460 . + . ID=g12743.t1.exon4;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 1421 1460 . + 1 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 1710 1763 . + . ID=g12743.t1.exon5;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 1710 1763 . + 0 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 2040 2253 . + . ID=g12743.t1.exon6;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 2040 2253 . + 0 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 2456 2796 . + . ID=g12743.t1.exon7;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 2456 2796 . + 2 ID=cds.g12743.t1;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . exon 3087 3308 . + . ID=g12743.t1.exon8;Parent=g12743.t1 NODE_3429_length_3494_cov_35.0085 . CDS 3087 3308 . + 0 ID=cds.g12743.t1;Parent=g12743.t1;3_prime_partial=true #PROT g12743.t1 g12743 TPLTDEEILSQVMIKNLDTGEYIPLSEAEKRLPKGLDPLALCIFRRTVDIDGEMDEGDGEDEDGPSHEKPELHADPAKGSEKTGMKGLKKGFKFLKDKVKDLVDDHHQDVHAEEGYLKTSVNNKSQVEFGHVRPVQDLTGAHVGAVWTMKFSCCGRLLATAGQDAVVRVWVAQSATPFFEELRHKFTGDSENGEDEPMSRRTSRAASGAPQPEFAVFEPFPYRLYVGHTADVLDLSWSKNYFLLTSSMDKTVRLWHVARQECLCCFQHSDFVTAIAFHPRDDRYFLSGSLDSKLRLWNIPEKKVALWNEIVGSGANLITAANFCQNGKMAVVGTYDGRCVFFDTERLKYHTQIEVRSTRGKNAKGRKISGIEPMPGE # PASA_UPDATE: g4094.t1, single gene model update, valid-1, status:[pasa:asmbl_1071,status:3], valid-1 NODE_1281_length_12429_cov_39.3808 . gene 1912 7345 . + . ID=g4094;Name=g4094.t1 NODE_1281_length_12429_cov_39.3808 . mRNA 1912 7345 . + . ID=g4094.t1;Parent=g4094;Name=g4094.t1 NODE_1281_length_12429_cov_39.3808 . five_prime_UTR 1912 1945 . + . ID=g4094.t1.utr5p1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . five_prime_UTR 2150 2182 . + . ID=g4094.t1.utr5p2;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 1912 1945 . + . ID=g4094.t1.exon1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 2150 2191 . + . ID=g4094.t1.exon2;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 2183 2191 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 2432 2474 . + . ID=g4094.t1.exon3;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 2432 2474 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 2701 2777 . + . ID=g4094.t1.exon4;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 2701 2777 . + 2 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 2946 3239 . + . ID=g4094.t1.exon5;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 2946 3239 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 3470 3622 . + . ID=g4094.t1.exon6;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 3470 3622 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 3847 3937 . + . ID=g4094.t1.exon7;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 3847 3937 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 4153 4402 . + . ID=g4094.t1.exon8;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 4153 4402 . + 2 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 4730 4808 . + . ID=g4094.t1.exon9;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 4730 4808 . + 1 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 4936 5090 . + . ID=g4094.t1.exon10;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 4936 5090 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 5377 5484 . + . ID=g4094.t1.exon11;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 5377 5484 . + 1 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 5697 5820 . + . ID=g4094.t1.exon12;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 5697 5820 . + 1 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 6216 6516 . + . ID=g4094.t1.exon13;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 6216 6516 . + 0 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . exon 6787 7345 . + . ID=g4094.t1.exon14;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . CDS 6787 6791 . + 2 ID=cds.g4094.t1;Parent=g4094.t1 NODE_1281_length_12429_cov_39.3808 . three_prime_UTR 6792 7345 . + . ID=g4094.t1.utr3p1;Parent=g4094.t1 #PROT g4094.t1 g4094 MAAKGTGIVKEGLLRKQGGTIQTWKDRWFVLTSVSLSYFQKKESDVPIKRILISEIKSADIISAGKLENRKSMAPGAVAHFYFNVVTPDRIYTISARDEKERQEWVDAVHSVTQSGKKVEQPTKEEAVVEKPVEKIIPRVLDRKDRAPFKGQSLEREFPFEAFVTDLRSLVRAETLSDLSFVVKDTVFPAHRSIVGARCAELAKHFSEEGGFVHAEANINTTTAEHFSTLLDYIYTDSVGLTSANVVDVHNVAVTYRLPRLVEICTVFIREKISVDNVLTMLKAANRLCEFEIERFCLGYMADVQRYQTVIRQKEATQIAQENKDLYIAMSQVLAQAPETFEHKFDSVSVSPSTLTKDIATLLETVKYADVRIFARDRELFAHKILISKRCALLLEEGSSRHSLDAMTSLSVAQGYTVLRFPTLDAHVVQNLLQYLYSNSIKVEYLDDAYGLIDLADRVQQDLIIGVCNEMMRNNLTGETALKILMVSSRYELIQLKKATLSLVVREASTICGRKDLRVVLSESPLNMIDVVRALVKGESGDFSDDQHDDDDDDTADDDFDE* # ORIGINAL: g4093.t1 original gene structure, not modified by PASA NODE_1281_length_12429_cov_39.3808 AUGUSTUS gene 710 1447 . + . ID=g4093;Name=g4093.t1 NODE_1281_length_12429_cov_39.3808 AUGUSTUS mRNA 710 1447 . + . ID=g4093.t1;Parent=g4093;Name=g4093.t1 NODE_1281_length_12429_cov_39.3808 AUGUSTUS exon 710 1447 . + . ID=g4093.t1.exon1;Parent=g4093.t1 NODE_1281_length_12429_cov_39.3808 AUGUSTUS CDS 710 1447 . + 0 ID=cds.g4093.t1;Parent=g4093.t1 #PROT g4093.t1 g4093 MATCEPNPKDSVNVRTAGSIDDAQATHMPDRRFDMEAELRKADEFANHARRKIEEARNAMRVHDQLKNEAFLLQQQNQKQAGEACNAMQNSLQQRDSAIQSERLMEEARVREHARAEAFEKQRAAAEADMVMCQKQAEHAAELQKKHEIGIFQAQQLARQGEFECKEAELRREMAMHRQGMPQVGPQIPLVNQPLQVEVEVKTNTIPEYRLSPGQTQPTVAKASSVIKEHIMQGSQAPAAIYKEE* # PASA_UPDATE: g4095.t1, single gene model update, valid-1, status:[pasa:asmbl_1068,status:12], valid-1 NODE_1281_length_12429_cov_39.3808 . gene 9344 11933 . - . ID=g4095;Name=g4095.t1 NODE_1281_length_12429_cov_39.3808 . mRNA 9344 11933 . - . ID=g4095.t1;Parent=g4095;Name=g4095.t1 NODE_1281_length_12429_cov_39.3808 . five_prime_UTR 11851 11933 . - . ID=g4095.t1.utr5p1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . five_prime_UTR 11525 11555 . - . ID=g4095.t1.utr5p2;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 11851 11933 . - . ID=g4095.t1.exon1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 11494 11555 . - . ID=g4095.t1.exon2;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 11494 11524 . - 0 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 11198 11280 . - . ID=g4095.t1.exon3;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 11198 11280 . - 2 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 11001 11034 . - . ID=g4095.t1.exon4;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 11001 11034 . - 0 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 10834 10890 . - . ID=g4095.t1.exon5;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 10834 10890 . - 2 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 10459 10577 . - . ID=g4095.t1.exon6;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 10459 10577 . - 2 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 10237 10327 . - . ID=g4095.t1.exon7;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 10237 10327 . - 0 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 9837 9982 . - . ID=g4095.t1.exon8;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 9837 9982 . - 2 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . exon 9344 9704 . - . ID=g4095.t1.exon9;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . CDS 9519 9704 . - 0 ID=cds.g4095.t1;Parent=g4095.t1 NODE_1281_length_12429_cov_39.3808 . three_prime_UTR 9344 9518 . - . ID=g4095.t1.utr3p1;Parent=g4095.t1 #PROT g4095.t1 g4095 MSIRITWLGHSAFEIRNEDRVILIDPWFQNPRFPADFKAEKVHDILISHGHFDHVGDAIELAKKHKAKVHASHEVANFLIKNGLEESLVSGMNIGGTVDLGDGFKATMVNAIHSSDCGHGPELSAGGHAAGFVVNTPLGHAIYHTGDTDVFSDMSIISDLWKPDVVLMCIGGHYTMGPRGAAYALDKFLPTVKIVVPMHYGTFPLLAGTPNELIGFLQRKDVVVARLNPGENVDLTGRDLKDALNALH* # ORIGINAL: g2629.t1 original gene structure, not modified by PASA NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS gene 5252 8578 . + . ID=g2629;Name=g2629.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS mRNA 5252 8578 . + . ID=g2629.t1;Parent=g2629;Name=g2629.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS exon 5252 8578 . + . ID=g2629.t1.exon1;Parent=g2629.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS CDS 5252 8578 . + 0 ID=cds.g2629.t1;Parent=g2629.t1 #PROT g2629.t1 g2629 MIKLMEAILLQIASNVERILFNATSLKDLLELDDLAERICWDAQDERGNNYLQVAIRLGNIYLVKLAMGNVQIDHHNDDGETALDIARGLHFDQAVLQLEEVWPEVCPPPPLPNPELLRAIREKKHKVVGELLQRGDHSVAQLQACVEESISHDSRLCFRTLLEVVSPNFHMRNRIAPLHMSVTTKFAWMLQPLLRITQLDLNFADRTGKTVLHHCVLANNGSFAPMLLYAGANPTIRDHNGISAVVLAMQTNRHDMAQLFFHNGVTLQRDEEEEVLILAEDIIVLYLNAGWIPSARSVNYAIVNNVAITTAILQKYLSAPVHPHFRPVDFIHIVVLLTKHQHEKGLATALHTMNDALWHPALTGGLNNILHALVLEHIDITAFLTTAVSTLSTHTLHGLLRHHNAEGKTPMYLAVSSGNVDAVKAFARCIPAHNLLVFTKQETSHNTLLHAALALRAPKQMLSTLFKELKLDEICDRFNKKMHAALHIAVAQQNYECVGLLLNHGCNPNAENSQKQTPLHKSAQLGSIDITRLLLSYGADPSHADGFGRTALYYACGTPAQLLVLVGYVDGFESLVDADGLSVLEYAAKSQKRYQSVLHLHFEKPLQLWPGECVRRAVAGACENGRRLLNFLLNNDNQTQTVETFLSSGAFQWEGAVANHMRRALGRFDCFGLGAKSYFNGRILGQIMATIAGSAATDGDDDNTLADIVTRMHEDVAAVVRMPLYLTRTNDNLTLLRQTLDQMKSSAEEINAPFSVSFANELGRDDGGLSRYLYATLGEALRGYAPARQFPVVGLDSGAWEVSGEVWQFPDFGQIAQSQTPTENSSSRERETQLSSRGGDTPLMLGHLLARCIAVDKQPLYLSLPCSTLICLLGRQFDSIEHYLAVLSVDDFDLYLAYMKLLNADDAAEQIAGLDLKMEADVDGRAMELLSGGSDVALTHENFSTYVLLKLRLAMRPDEKMQRMVQGFQEVLLPSVSSIMSVFQARRLIEGETKVSGEDVLERTRLGIDDMHDNAVQRRCFDVFVQLVRDEMSGEELSRLLEFWIGSGKLAFDDVLHVHVHPEWSNEHLPISHTCAKLLDLPPIEDLDKLRRKIALASSEGQSFSII* # ORIGINAL: g2631.t1 original gene structure, not modified by PASA NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS gene 11204 11590 . + . ID=g2631;Name=g2631.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS mRNA 11204 11590 . + . ID=g2631.t1;Parent=g2631;Name=g2631.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS exon 11204 11590 . + . ID=g2631.t1.exon1;Parent=g2631.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS CDS 11204 11590 . + 0 ID=cds.g2631.t1;Parent=g2631.t1 #PROT g2631.t1 g2631 MRILVIVFAEDIRDNDGLQSLLNREQAAIKNNPANLDNPTNSKTPDDPPDSLHILNYNCFSGDVFENGKMVPYHQLKAIIIVGDPMIRSKNEYTAKFKKMLSEASLAGGGNLPIILMSDVLQNTLAIL* # PASA_UPDATE: g2632.t1, single gene model update, valid-1, status:[pasa:asmbl_3016,status:12], valid-1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . gene 14504 26185 . - . ID=g2632;Name=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . mRNA 14504 26185 . - . ID=g2632.t1;Parent=g2632;Name=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . five_prime_UTR 26103 26185 . - . ID=g2632.t1.utr5p1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 25702 26185 . - . ID=g2632.t1.exon1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 25702 26102 . - 0 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 25522 25614 . - . ID=g2632.t1.exon2;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 25522 25614 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 25300 25383 . - . ID=g2632.t1.exon3;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 25300 25383 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 25035 25109 . - . ID=g2632.t1.exon4;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 25035 25109 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 24867 24938 . - . ID=g2632.t1.exon5;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 24867 24938 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 24697 24768 . - . ID=g2632.t1.exon6;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 24697 24768 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 24484 24555 . - . ID=g2632.t1.exon7;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 24484 24555 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 24143 24217 . - . ID=g2632.t1.exon8;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 24143 24217 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 23954 24031 . - . ID=g2632.t1.exon9;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 23954 24031 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 23657 23790 . - . ID=g2632.t1.exon10;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 23657 23790 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 23277 23570 . - . ID=g2632.t1.exon11;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 23277 23570 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 21951 23165 . - . ID=g2632.t1.exon12;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 21951 23165 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 21761 21862 . - . ID=g2632.t1.exon13;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 21761 21862 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 20928 21377 . - . ID=g2632.t1.exon14;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 20928 21377 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 20449 20763 . - . ID=g2632.t1.exon15;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 20449 20763 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 19801 20310 . - . ID=g2632.t1.exon16;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 19801 20310 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 17837 19478 . - . ID=g2632.t1.exon17;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 17837 19478 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 17465 17736 . - . ID=g2632.t1.exon18;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 17465 17736 . - 1 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 16815 17345 . - . ID=g2632.t1.exon19;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 16815 17345 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 16664 16740 . - . ID=g2632.t1.exon20;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 16664 16740 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 16279 16561 . - . ID=g2632.t1.exon21;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 16279 16561 . - 0 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 15111 16082 . - . ID=g2632.t1.exon22;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 15111 16082 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 14504 15018 . - . ID=g2632.t1.exon23;Parent=g2632.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 14504 15018 . - 2 ID=cds.g2632.t1;Parent=g2632.t1 #PROT g2632.t1 g2632 MISKRHPQPANMGNEFLHGGGVGNPFAHNRNRHRASVQHIHWTVIAILMCMGLALWTAPIQLAAAAPAHATTPPPEDIQATNLADNDRSKRGDDTSCCNKNVASKCLCFGIANVTTKATTSLTAVCGSLSGTTLLFSGRCYGEYLPDALAANNELLSLPNNINEVYIKDITVRPGGPLPKTLLDRLSGALTKISIRNAEGFQAYLPNLLSSIPFISHLDLSSNGLQDLQANAFNGMKALTHLNLSDNKLGVLPDNLFKDNTLLRLIDFSQNKLKLLPRGLFSGLAALEDVNFSNAMLRDIGEGIFPSSVIPLETLDLSENMLWRVLTHNLPKSNISAQVQLGVCPCVDMNFDCDEVCQCGGGRVDRGKCSNTDDGLGRACFVDKIGPGIKLQSPSDAFPTYTTMKTLAEGTVCACLVANYRGSESRAMEPLPNLAGKSYEQVQSFCSALIKTAPRDSQSSSAQEGALGQDGCKQLCQNDGNCQAVTYVEMSASCIAFGNASGTFPSRQWTRLSNLAINRRRRRSTPMVWATVGSDRSQEILIEASFRPPVSGDYSFAIPMGTRFLIYEESKSGSESDFTAALNEVTGAKLRCPDGENWRCGGLCCPPAFHLLIADDHQFDFNNPMVWQNMRGDPYGVDNCRCVNPAHLPVSGSVPKCGDSKQQLSPNIESILGQWVSDGQSIFRYRLHGDYCYDSSDPKFTDVPFSVCQAIGDVRIVGALHTADGKDRRQVPTCKILLKKDKTIAYKVRLLLKGPLSSWVPSHLLSPNWPVVESAQARWSSYTLDCNVPYNYGMFGELATRFESDPGDVDAFAYIPILSPESGVGGMDRLYLARCNSPIRQEKPAEELPFSFDAAMLTEQFFGYAVIPATDANFDKTVLGAAKQATRLVPMPSGMTETSFFDFATYLTEDVHPPVPPTPVVPGTEPHALFFVPPVSANTHLPTIAVTLLGEDSRAFTARGFNQVTGLSVTMPALATILSAKMESLSPTPRSLIVARKSNAVHFNLDNCRQTPSVCKQFPSAVTVGVMPSSVTWICEETGPSTTRKIGTSTVPTSALGIGVDFRTSMIGAAVGSASVQYPFKTKTRGTLLVDGVRIYSSSSPPPQVVIVFHDARASSAGIASTVTLKTENVDSVVLNDGAPGNNLYEWSSFVVGDANNLTITNAAKTPVTFQFMLRGEVTETCHMAVAFDVARFDEERFDDGYLAIQNVTITLPFVQLSRQAPLPTLPTTLIARDYTGLLGSQFGGDLTVDIATVFGHGIANKMGNRFCELKRNDEHAAYVCDLAASKELSDTIKTWMRGAQARVIFSPAAFQLNKNVEIPVRATAEGILWSSERDFWSKLTLAIHYEDEPMVFCVNSAMNTTVDEGLCAGVDKPNITTCGEKCKCDVDCSGCWSALAIAGEAGQCTRDMNSSAIAYSRPLNISCNLCKGQSVVFLNVSQVLCEGPPPPGRVTCSPTEVLESAAVWDELQSLRIVQISAERSTKETEIMLGVPTMEARQALAEAEAAIAEAELHILATNSLVSMEVPVVEAEAALLTAKVEVLRQSETLRTKLIEQTIATELVEARTRERQALAGLVEPLAGRTLPRIEVLGAGFNLVRGNPHCTDDPFGMGGIVPLVDLSYTTMTLVGNKFLPDGVYATELSTAEFNSNMEILTSESELRESAKMSLKFSTSFSAAEELSSEKTAFSMNTQFSTETEKIRSSKDVFVRNKVTVTVARMNLLPNIADVARPSKSLYDYWRSIKVDDDCCVDSSSTDCIGCNALDRMPDVFGTHLMKAVTLGCIGLQQLQLDVVEVKKLVDNEMSADSEASNEQSEGKTELGMGETTKVSTEVSVALKRAMQSSSSSTQQKIEEKYLGGIPQPGGFFDDGQVNNDALKTYAGTCIDNPFITDYTLMRVDEFIEQMGPSKFDEDRDVFVAKLKKFRIIMREYCAGIMNCAPDSRDVDRIDPVKFNDLMRFTYTHSNTSLYTLSITPNQQNVRLSSDISGEKDSMYDLSPDDEVCFPTVMTNQNLWVNDPDILDFPGLAWWLSDSPNFPGCSARRHGSCAGEFKILRVVPAAKTYVSCRQACQDTSSCVAGTFVSNPNGDGKHLSPDMYHDDPAQCVLFLSSMLTENTIMYAWNFDNHMNWRQHWRGRMISWRCGSMPLPAWDPFGLRSFRKEYADGDNSKEESLFRLSYPVEEHIDISDKTLRYGKGFLITSKNGCLSKVEQDAVSPVRYRWSVINVASSMAEPDCVIFRFLSRVQPIGSIVSYADSVFIEASTNFTIMRENYVFNRRPSLFVAPGDPNGILSSVVIVAENSPGSDLQSFSWSLSRGASLSVLQTIGEGTTSEYTFEASASVDQRLTSATITIKFTVPVSRVSFPVALAAAAKTQAKESVATYALRLIKSDFVVTMRRNQPITSGLSSMDEAPASMRFVSGRQSDDVLYVLNVTFTSPFGPQDTLFLSLSNPDNILGIEKQIASVAAKLPVPIVVNMPTSIWAELSCQILDPVTKNLTAIGRLHFSQLVMDYDKDSVSPSDFSVYRDNKLVNYAFDIHARDAGVAMSPDDTITPVTSATFSFSVSIPGGVNLSSITIGVGAGRIFTLELIAFPSSARASLQGALANPLKVCIMGAGKAWYIGDSKDGDGTGTIPNGTPNNPPSNPTPVDKGTKPVDMADVQQLVNDVVSSRTAKIASETGAWGSAATVGAVMGSLSFAALLVGGVVAYRNRWTLKRMIRRETRFMGGNAADIITNENAGFAPEMHNPLRDMQMPQTPAPAVAADVGAPAAEDLGDGDDDL* # PASA_UPDATE: g2633.t1, single gene model update, valid-1, status:[pasa:asmbl_3017,status:3], valid-1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . gene 26894 32098 . + . ID=g2633;Name=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . mRNA 26894 32098 . + . ID=g2633.t1;Parent=g2633;Name=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . five_prime_UTR 26894 26930 . + . ID=g2633.t1.utr5p1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 26894 29250 . + . ID=g2633.t1.exon1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 26931 29250 . + 0 ID=cds.g2633.t1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 29326 29403 . + . ID=g2633.t1.exon2;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 29326 29403 . + 2 ID=cds.g2633.t1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 29492 30031 . + . ID=g2633.t1.exon3;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 29492 30031 . + 2 ID=cds.g2633.t1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . exon 30147 32098 . + . ID=g2633.t1.exon4;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . CDS 30147 32068 . + 2 ID=cds.g2633.t1;Parent=g2633.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant . three_prime_UTR 32069 32098 . + . ID=g2633.t1.utr3p1;Parent=g2633.t1 #PROT g2633.t1 g2633 MLLLRWVSLLIPLVLWMGGIVCAPPSARTLGCVDFVSSTQEWYVLYQFDLGSSFCVVLSEDADAGRAPLCIANTTMSAWTALASKRSPLAQTVAQLFVRDSTGKLTDTPSPNVEHIVFDSDFSQLVGDLPDGVDRLAKDFESLHDVKRMHGIAAYSIVAQEGFVIFHSNPYFPMLAPGPNGPRVVPPTDSTGAHTWDTGLSVIEQYYICVSITKESSSSIFEALAAMNPFVTAHRVSSSIVSELGRFATPSQPFSGSVFAAVAWPSFLECFSMAGVDPKRQCLRHYQLDMQAHSQKYPAKTNVTILVKMRAAEPSVCVSSNADGTSLTLDYSWGLRPWSSPGFMTALVGPHVARGFVCFGTLFTERYVQTAAAVCIRNEHLWNVTLDAFNFVEAVCQAAPNRRNVRTIRPLEGPIVHAATRRREVSRRWTANGSPADASSADCSTGDFCDDQRRDLAFARSMPPPRSKPEPARDRSMDKWVADLKRVSDAMWSKIYSQFGHRGSAAAERNADFERAYTPSCLFRQFSHHGLRIREPSLISTRSHASQKSNDEEFASIQVRWAVSHRTYASIEVFEQLDDAAVRTHLATFAVDGKKNGILSVILPGLDEDGSRAFELKHATTFQYETPLAGRSVFALHNLNLTSIFSATVTLKTKPRSAMGMSGSSYWPPKDRTLRPNEQCVVGPCTYRIDRHVSNPDGSLQFAATINEHIEYRDAKRQKSRATVCRGKSLCVIELETMEENCLEEFEKMTAPSSDEPPLIPNLVPDTITPENAEPENGTPLKDDDPQAERTARADPEVNYDPMSWLGTTTLEEIPVDAPSTTIATSLRDKIDWYESALCEPHLFQQEDEEDEEEERDRAATLWALVPARSNHYVPVCHQYKPGHRYAFKVGRDLRSVLFEDNRTPQEEETLCTSIRGHQKAYSLKLPDTNKGLYMTLYDLEKKEPVVSAYSFTLGGPRTDYVTSIRPRSASTAMFMINYVLSGWAYANQPATLLTCDQSGGGVGIFGRGFLVEVNQAKENKLKNSLMLLDKQFRDEFRPKYQRGHLNPNHLNTLHRKASLTTTGSPYKQSRRDLATFTFLNVIPQAGSCNVGAWSKDEQRIAEALLQVSAALSVAGNNQDVTVYFMTGTRLMLRGSVQKKTIWTEFCAPSVFGAFRIERTNDDACSFVPMDGVLPPAIALQACQEQYERLRPPDDVNHPQQAYRDIVSIAILSNKDPQSKVFVADTPPDTCSQNKDVSRCELEKETCKWDLETNICRQRHRCDDFVEAECDSQACTFHTGQCHPWFGNVPRTHGSVTLRILPDYGGGSRADRDLKALISSLKEMIKTKNDVDDIPISHRAKTRTSITQLFIGAAIMWMCSPTNLQTPATSSFVRMACEPLLVGDKSNKLCYPKLGMDVDPLCSAAAPKDILGVLKKDFIPDVMEKIKGKGINLIIRAVEYLTRLDEEDEDEDEDQNNKDNGEGIEDDEDNEDNEDDENDKDDEDDEDVDEDDDDDDYGDDDDSPPDVNMDKIASIRKQLATAKRRLATAKRRSAHPKVWTKRRTTAPRKALSQRSKVEQRTKRRRTTEDAGTQRSKVARVDTDSGLSSAVGSGNSADRLFSLMEPSLCSCILVLLEKVV* # ORIGINAL: g2630.t1 original gene structure, not modified by PASA NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS gene 9809 10501 . - . ID=g2630;Name=g2630.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS mRNA 9809 10501 . - . ID=g2630.t1;Parent=g2630;Name=g2630.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS exon 9809 10501 . - . ID=g2630.t1.exon1;Parent=g2630.t1 NODE_191_length_32691_cov_22.8347_potentialcontaminant AUGUSTUS CDS 9809 10501 . - 0 ID=cds.g2630.t1;Parent=g2630.t1 #PROT g2630.t1 g2630 MRAVRERKIRSCNAAFARKSKTAPVPETVEQGFNPAVVQTVERRHNPAILHETVERSAIVHETVERRHNPATVHETVERRHNPATVHETVERGRNPAIVHETVERERNPAIVHETVERGRNPAVVGGDSRSPPRYSYVTLIYHAIKANNGAATLGQICRWMEETFPYFAATTTTTWKNSVRYNLSINSCFKRTKADKGSPWSVDEEAFAAIKQRVGRLKGTRHGTKSADG* # ORIGINAL: g2889.t1 original gene structure, not modified by PASA NODE_6587_length_540_cov_64.9914_potentialcontaminant AUGUSTUS gene 2 540 . + . ID=g2889;Name=g2889.t1 NODE_6587_length_540_cov_64.9914_potentialcontaminant AUGUSTUS mRNA 2 540 . + . ID=g2889.t1;Parent=g2889;Name=g2889.t1 NODE_6587_length_540_cov_64.9914_potentialcontaminant AUGUSTUS exon 2 540 . + . ID=g2889.t1.exon1;Parent=g2889.t1 NODE_6587_length_540_cov_64.9914_potentialcontaminant AUGUSTUS CDS 2 540 . + 1 ID=cds.g2889.t1;Parent=g2889.t1 #PROT g2889.t1 g2889 KHTSNVYFIVDFVRQVRRMISNMVRKILALIFGRRVAGDAIAAPVVNSSLTLQFKSTLFLMKAVVEYIKGHSECKHMVASQKEVEIANLNELTYTEEWVGINIQLPDMTVMFDMPLLLKFKRTKGQPSQLIEFKPAQPPCATDARISSFTDLLPCSQMKDMIKSEVASRTKTTQEGTVV # PASA_UPDATE: g9493.t1, single gene model update, valid-1, status:[pasa:asmbl_1619,status:3], valid-1 NODE_1448_length_11208_cov_40.6433 . gene 2707 4028 . + . ID=g9493;Name=g9493.t1 NODE_1448_length_11208_cov_40.6433 . mRNA 2707 4028 . + . ID=g9493.t1;Parent=g9493;Name=g9493.t1 NODE_1448_length_11208_cov_40.6433 . five_prime_UTR 2707 2779 . + . ID=g9493.t1.utr5p1;Parent=g9493.t1 NODE_1448_length_11208_cov_40.6433 . exon 2707 4028 . + . ID=g9493.t1.exon1;Parent=g9493.t1 NODE_1448_length_11208_cov_40.6433 . CDS 2780 3850 . + 0 ID=cds.g9493.t1;Parent=g9493.t1 NODE_1448_length_11208_cov_40.6433 . three_prime_UTR 3851 4028 . + . ID=g9493.t1.utr3p1;Parent=g9493.t1 #PROT g9493.t1 g9493 MSRKANLSVDLSGLSTPPATQTQMQTQPRARKGRTITQTHMRPSAVIPGLGSNGACTADLAHMGTNTLLQECERRLFGGDVQPSLFTSALNLPNDFTAHAPSARKSTKRPLVQDDSIDSLASLTGASSTWSADSSMYEAIESLASLSSLNALDSSSLGRTDMRDELRTRLSEHAPCEPSSMWASRDKRRRISEENLERKRKQTFLPKELVREYCEKTKCEVKALTTKPPSHEYRTPASAVKAEPSVAAHSPAVLPTPAADSHSTAVSAPAPKVGGRRRRNAHATAEERALAKRERNRVAAKNLRARKRELKSVLEFHEDNLTQGNVKLQSEIEGLRTELATLANALASHSCSKKSR* # ORIGINAL: g9492.t1 original gene structure, not modified by PASA NODE_1448_length_11208_cov_40.6433 AUGUSTUS gene 342 2198 . + . ID=g9492;Name=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS mRNA 342 2198 . + . ID=g9492.t1;Parent=g9492;Name=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 342 392 . + . ID=g9492.t1.exon1;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 342 392 . + 0 ID=cds.g9492.t1;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 680 748 . + . ID=g9492.t1.exon2;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 680 748 . + 0 ID=cds.g9492.t1;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 1054 1188 . + . ID=g9492.t1.exon3;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 1054 1188 . + 0 ID=cds.g9492.t1;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 1601 1732 . + . ID=g9492.t1.exon4;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 1601 1732 . + 0 ID=cds.g9492.t1;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 2052 2198 . + . ID=g9492.t1.exon5;Parent=g9492.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 2052 2198 . + 0 ID=cds.g9492.t1;Parent=g9492.t1 #PROT g9492.t1 g9492 TGEATPDLTTSQLQQLQETLSRTTTRSLGQAAPAQATIVTPSKSASTGIDRLLSLDPSSESLDDVPVAHVTATNNNTHVTISDSKGRVVAAGNCGLAGFKNAKKGTAYAAQQAAFLTSKKAYQKFGVREVRLKVSGVGQGRYSCVRGIQSAGIRIVSVTDVTPIPHNGCRPKKTRRL* # ORIGINAL: g9494.t1 original gene structure, not modified by PASA NODE_1448_length_11208_cov_40.6433 AUGUSTUS gene 4407 11020 . - . ID=g9494;Name=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS mRNA 4407 11020 . - . ID=g9494.t1;Parent=g9494;Name=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 10961 11020 . - . ID=g9494.t1.exon1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 10961 11020 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 10534 10659 . - . ID=g9494.t1.exon2;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 10534 10659 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 10189 10296 . - . ID=g9494.t1.exon3;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 10189 10296 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 9619 9861 . - . ID=g9494.t1.exon4;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 9619 9861 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 9358 9474 . - . ID=g9494.t1.exon5;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 9358 9474 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 8992 9099 . - . ID=g9494.t1.exon6;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 8992 9099 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 8571 8646 . - . ID=g9494.t1.exon7;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 8571 8646 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 7727 8160 . - . ID=g9494.t1.exon8;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 7727 8160 . - 2 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 7309 7578 . - . ID=g9494.t1.exon9;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 7309 7578 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 7050 7107 . - . ID=g9494.t1.exon10;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 7050 7107 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 6548 6650 . - . ID=g9494.t1.exon11;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 6548 6650 . - 2 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 6160 6226 . - . ID=g9494.t1.exon12;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 6160 6226 . - 1 ID=cds.g9494.t1;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS exon 4407 5789 . - . ID=g9494.t1.exon13;Parent=g9494.t1 NODE_1448_length_11208_cov_40.6433 AUGUSTUS CDS 4407 5789 . - 0 ID=cds.g9494.t1;Parent=g9494.t1 #PROT g9494.t1 g9494 MRTNDDSVASIIRIEVRLWKAGYVVSFHDDDQAPPFRIENLSHMPIVITQPGSLEQEIMPGQTVPHAWDDLSRERAIKMWPQTASPSIVAECHIENLGETVFMHYPNPMYISCGANESLVVTVSGLTPEAIASGRRTDNSPRLSGASIPSPFNSRASSASVKPRLVLAPKLQRSEAADQLFTFSADDKLVHIASGFCLEYSRDFFGGVSHSLTLSSRQGDDDTLRWRIRGGIISPMGRNALALEYSAGAVEGSEITVASTGFARQSLQHFKLAKLRPGSGKLRCHVVADGPTRVLRIADADKKSEAVLTASGRRQSPRVSMRRDASAESIGSSDERKEQDAPEVAVLLSLGGGLGVSVIDSSPMELLYLSTGPINVEFTQGTLRQSVEASITWLQVDNQTSGVFGNQSNAVVLYGGPNKTTSSQGGSLSSGRPFFRGLVMRSREALGTTAVFPYLDILFQEMHVQAEETFVLRLVKMAFAVAAAMEKTPLPLRAPDSIPTAAVVPIGVGDESRTIEYGRSVDDPRDAVALEYKGGDRLYFEIAILQPIKINVMVEAAAEIPGDLEATRRRFVPFVNVGPTSVRLNACVLENLFATRDSLVETLKSWYKQELLKQAYRIVGSADFLGNPLGIFNNFSTGFKDFFYEPAQGLVTSPKDFVGGLQKGTSSLLQNLTHGFADSTSRITGTLSSGLVSLAGDAEYARDREKARREKKEGVDRAISGVVGVTRGIVGGISGIVTQPVQGASRDGLGGFFKGVGKGLVGVVAKPVAGILDFAADTTAAIRDTAGLNNRLVFDRVRPPRAIGPDLAIVRYSKAMAVGAGLLSRMSDFEPGERYVMHCLVSSSDCVWAMLSSERLVLYVWVDTNTRTVQDTKAGKEKESKSAAAQGVVEIKPELSIRLAGMLPDALAATTNRSVPEKVVRLEANILEFAANSEFVRRQGLVAEARRQSVQVRRVPVQGGPQTHTHVPSRGGSARGSTSSVTSRGSGSSASGLSMATVEAETYLAVVVFDEHRVAQALADKVTGSLEALQQRSHVSVHERGEWTHASLSL* # ORIGINAL: g5445.t1 original gene structure, not modified by PASA NODE_2933_length_4710_cov_47.3722 AUGUSTUS gene 167 2769 . - . ID=g5445;Name=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS mRNA 167 2769 . - . ID=g5445.t1;Parent=g5445;Name=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 2675 2769 . - . ID=g5445.t1.exon1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 2675 2769 . - 0 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 2350 2418 . - . ID=g5445.t1.exon2;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 2350 2418 . - 1 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 2084 2209 . - . ID=g5445.t1.exon3;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 2084 2209 . - 1 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 1846 1924 . - . ID=g5445.t1.exon4;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 1846 1924 . - 1 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 1563 1620 . - . ID=g5445.t1.exon5;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 1563 1620 . - 0 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 1126 1213 . - . ID=g5445.t1.exon6;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 1126 1213 . - 2 ID=cds.g5445.t1;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 167 827 . - . ID=g5445.t1.exon7;Parent=g5445.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 167 827 . - 1 ID=cds.g5445.t1;Parent=g5445.t1 #PROT g5445.t1 g5445 MVLAFILCGGVGSQAQLDAIRQTHTSQATSTGDGRIGPSTVRLSTTNCSGVARFRHGDLEIESHSNFSTVRANVCVYSGKYMYEVQLGSSGLMQLGWALIDCPATNESGIGDSPDSYAFDGFRVKKWNVRPEEYGESWSSGDVIGCMIDMDAGSIEYARNGRRFGVAFDHVRKGMVGLAYFPSVSISRGERCLLNFGACPFAHPIAGFSPLESTPHTAVAVADHVTQCLLRATPLLHVMHRPHHRASADNGVYGCGRAGDLHYVPESVARGAMARVARLISVSAPAAGVSAGATRVTCLLWRTLFDVVHTCEYSVDAVVVPLLARLLDADSQPTTAGPAGGTASSTLCSHLDALTVALSDFEADWMVEHVMCAIALRAFSAGITATARGGDQ # ORIGINAL: g5446.t1 original gene structure, not modified by PASA NODE_2933_length_4710_cov_47.3722 AUGUSTUS gene 3874 4544 . + . ID=g5446;Name=g5446.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS mRNA 3874 4544 . + . ID=g5446.t1;Parent=g5446;Name=g5446.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 3874 4098 . + . ID=g5446.t1.exon1;Parent=g5446.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 3874 4098 . + 0 ID=cds.g5446.t1;Parent=g5446.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS exon 4245 4544 . + . ID=g5446.t1.exon2;Parent=g5446.t1 NODE_2933_length_4710_cov_47.3722 AUGUSTUS CDS 4245 4544 . + 0 ID=cds.g5446.t1;Parent=g5446.t1 #PROT g5446.t1 g5446 MASTVVRLLTLALAVSAVFVDACVTSPSRPWKGTACPELNCPDCAVKTTYTRHERRGGALAAAHRPGFASAEFALVIGIDGLGGEYLHPSRLPSNVSLPNFEVLKSTGTWTYHSRSVMPTISKPNWAGIIAGWVAEGIYHTHCYPPLSCTWFRLGCGYELVKLAAATARILVMF* # PASA_UPDATE: g9076.t1, single gene model update, valid-1, status:[pasa:asmbl_3593,status:12], valid-1 NODE_2131_length_7577_cov_36.6978 . gene 132 7406 . - . ID=g9076;Name=g9076.t1 NODE_2131_length_7577_cov_36.6978 . mRNA 132 7406 . - . ID=g9076.t1;Parent=g9076;Name=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 7212 7406 . - . ID=g9076.t1.exon1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 7212 7406 . - 0 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 6781 6864 . - . ID=g9076.t1.exon2;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 6781 6864 . - 0 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 5929 6441 . - . ID=g9076.t1.exon3;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 5929 6441 . - 0 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 5179 5491 . - . ID=g9076.t1.exon4;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 5179 5491 . - 0 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 4219 4936 . - . ID=g9076.t1.exon5;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 4219 4936 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 3802 3962 . - . ID=g9076.t1.exon6;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 3802 3962 . - 1 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 3505 3629 . - . ID=g9076.t1.exon7;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 3505 3629 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 3179 3350 . - . ID=g9076.t1.exon8;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 3179 3350 . - 0 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 2717 2809 . - . ID=g9076.t1.exon9;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 2717 2809 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 2340 2480 . - . ID=g9076.t1.exon10;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 2340 2480 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 1877 2020 . - . ID=g9076.t1.exon11;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 1877 2020 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 1427 1600 . - . ID=g9076.t1.exon12;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 1427 1600 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 925 1054 . - . ID=g9076.t1.exon13;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 925 1054 . - 2 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 498 684 . - . ID=g9076.t1.exon14;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 498 684 . - 1 ID=cds.g9076.t1;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . exon 132 300 . - . ID=g9076.t1.exon15;Parent=g9076.t1 NODE_2131_length_7577_cov_36.6978 . CDS 132 300 . - 0 ID=cds.g9076.t1;Parent=g9076.t1;3_prime_partial=true #PROT g9076.t1 g9076 MLDPVSIPFSKLCSVNKIAQLAYSGFSEDFTDKSVYPYYNRLSRGSGIEGVAIAKYIAAHGWSKIAIIENVAYPSPLSLKSTFRDLGISVAYSITIPSTAERIDLGDQLLKLKRAGVKVIVTYVQEDASYNLYKNAYKYGISGLHGVTWIAGTSVAGSFPFQNQWPNDGWCAERPYCTSILTGMLFFVQQYGSATDPRLITLTNKFVNKDHLTVRGDVLFPNQSVRPYLGLAYDTLMFALTAITNLVATNQTITGPKLSQTFKTLTYAGISGAVRLNKFGDRIGYSAAILELNNLYTRTYDAQPSRGVLNYQILAVLSMTDADQVLLEAPLGVPQFYPNASAVGTRSYAGINLATGQAVISTGQYFLTHNCSQGCGGGARADPRPYLPSINCAFSMAFTNVPKGILETITNMTVAGFATALPVGITSQVASAVQQRVLAIYMPTVYSKMTTEFIANFTAVLDAQVSAKVTTLLASNDASTITNCGPTGLSSTTTACRAYVGPMTTVGANCSNVLAAFLVSGCNATSIQQQSVCRPSAPCLAITSPPATAVACGMNMATNTGPTLLTSPECKALIEVPSASSADPLVTNCGYAAPNVSVPACNTYARATFTASTAIGTACSALLTASNGGLCASSPVAACTPTPACVSSVAPFVPVVAQCGADAPTVQSNLPKTPCSSLLLPALFATSNPYVDIFQACGLDGTKFVSAPCQAVARTRAVCRTISPAHDFVNGVCTSQDICTCHSKANKPNEAAYTGDTCSMPDCNPLCAKGNCTAPDTCRCFDGWAGALCDAAVCLSPYGAGACATDGGVCRGKTIHVYGADSNACSCFPGRFGLRCEQNCNCNPSGTLQSSFSSQTVNSTTYSAYTCSAEGKCLCKAEYEGATCGTKKTPIYVIVVPAVVCSVLLLILLVVLSRWYLRRSKEQAELRNMDWCIKYSDISLHEKKVQSRSSLASSNRSRSGKHSQSAASSGIHVKGAEGGQMFASTGFFRGSRVAIKRLAKPTVAIDIELRRDMRLMRNTRHSNVIDFIGACVEAPNVCVITEYAAKGSLQDVLGNQDIRLDWNFKFSLARDIASGMAYLHNSDIVSHGRLKSSNCLIDSRWVLKIT # PASA_UPDATE: g13954.t1, single gene model update, valid-1, status:[pasa:asmbl_1841,status:12], valid-1 NODE_1519_length_10773_cov_40.5152 . gene 593 10329 . - . ID=g13954;Name=g13954.t1 NODE_1519_length_10773_cov_40.5152 . mRNA 593 10329 . - . ID=g13954.t1;Parent=g13954;Name=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 3076 10329 . - . ID=g13954.t1.exon1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 3076 10329 . - 0 ID=cds.g13954.t1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 2595 2690 . - . ID=g13954.t1.exon2;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 2595 2690 . - 0 ID=cds.g13954.t1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 2141 2443 . - . ID=g13954.t1.exon3;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 2141 2443 . - 0 ID=cds.g13954.t1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 1575 1634 . - . ID=g13954.t1.exon4;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 1575 1634 . - 0 ID=cds.g13954.t1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 1170 1230 . - . ID=g13954.t1.exon5;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 1170 1230 . - 0 ID=cds.g13954.t1;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . exon 593 661 . - . ID=g13954.t1.exon6;Parent=g13954.t1 NODE_1519_length_10773_cov_40.5152 . CDS 593 661 . - 2 ID=cds.g13954.t1;Parent=g13954.t1;3_prime_partial=true #PROT g13954.t1 g13954 MPRIENAHFCLLIKAIQVVVALCLVASTCAAALTPAGRSAGNVMGAHVTIKEKGVTTANRIHNVAADIASQSAPPLPGEPSVARATERKARAVSAFESQTFSFDDALRAAHMSILQGHVVVAVELEVGRNYVWAFNSTIDAMPMASSTFTIASGVTFSIRRSAASGALGAEPPVVTCVRGATGTDQEVQYGARSPRFAVRFGGTFEIGGIVIEGCDGVLADVDDGAVLSVFDSTVFVSYCPEADLNFNISGVASFVRSEFVCGMNSSAVNQGQSDDEAQMRLVRMEQSAGDMPASRASALGGQGVAVNSENSTAAAVLINAHGMARVRVDGCRMERWAGLLSVKGNADAVVVASTITACSGACFHISSHASVSVTNSSRILAAEVADVRDAGLFTVSGSDVASARSAADSAARDFAQSRAPCDAFRTWDHARLVIVGSTLSLSGCRGLASRDDSTALIDGVLIDAVDTSNVWTLEDSASLYVRWTSVIANSSVAIVGDSKDLSMVTLLETYVSAPNFLFMSGGARVDAHRLSVESWADPSIYLDDQNVIVLKESASGVFSACHFTGTNLAPIFQLCGRHTVGLRDDATLEVTDSSFVNMPGALYARESASARLSAVSISANTILPTGEVKLEWPQYASVKVCEGGAFLLEDNATLFVNSSALTALPLVSEGGGVGAFAGTSRALIINTTVDVAGGTMGISGGAFFLRENAHVNISHCKFDNLFTVAFYSMQEIPSKGGFAQLNDGSFLAVTDSTISSSRSYNGGLVHAQENSVAVVTRVSVGVSVAILSGGVFFVTHDAQLTITDVTVGSAFAGLSGGFVYAGNSAIVAIDSARMGDVEAYWGALAYAMGIARASLSRITVRSALCKTYQVSAVDALDENPRNFRAKQYSLLGEPEYSGCLVFGSSDAFVGLEDVRVSDSVTTQFAGAVFGLKGSSKVYAQSILLAAVTAGRNGGVAQVLDMSVLEIGGLFVANVSVVVSGGIVSATGSATVSVDDFSIEQAFARQGGGCVHAAGTANVTLSRGRISSALTDGPGAVLLASGSSLVYLDAIAVKSASASKGGVLAVSDAVTVVAVNLAVDQSVALTDGGCATVEGSATATIVDSTFQSCTSGSRGGSVYAGANAVVRMANVTFLASRALEAGGFAAVVGSATIDMAHVSVSRSSSSRGDGGCIAADGTADVRIDDSEFHSTSAPNNGGFMSVGGDALSALTGVRVMSSSCNGRGGVISASERASINITLCTFSNATGKKTGGFVSATYAASIRVHQTSVVRAWSDAGVPGLFVRGVSRVDMHHVRLSHVLRPFWPGEGWISAAPGSVSLDDVVCDGCTADSLLSADYSLVGAESLVFANLTDIPDIGSDKERLVTLLSSLRADRPLRLRFPSWNRPVYSDTTIDTNLPFALSNVELERSAVVIRGVGAINFSSFIGGSSLTIGELAHAAIDYLDMTDSSVTIDGHAQFVHAWFKHSRLFIGTVGIFHCQRCTISSDTFLRRTSSNDASAGDVLTFVVLSRLSYAAFNESTIGDWSAVGNGGFARVSGSSILHINGGTVGSLQCSGDGGFVSAEVDPSDAVATSLVSVSGVRFGAPLSAGGHGGFVSLRGFSQAVIADCIFDSAVAGRSGGMAYLAESASLSMTRCNVSSAISLGSGVVGGGFVAILDAAAVLLHRVHVDDATAQSNGGFATISSHADGGDQKLPSLTAEDVFVGAVMAGDSGGGIECNRCRVSIVRGVFGGGSASDAGGLIHISGGTDSRVEFKRCVFDGFSTGVQGGLVSLADRSAVLFEECHVSNVQSVVYGGAVVMDAGTVVVTNSSFARTISLSGGGGSFLVRAGRLHVSDSVFTDTVAALNGGGFLLLEARGTAVLQNVTVWGGRCLLAGGGVLRLSGRALMTARGLIVRDAAAAGCGGVLLLDGIANATIDGLAVSGSTAEFSDGGAICIVGKGELCLSNSDIANPMAGSSGGAMSASGNATAILRGVTMRDTEARDGDGGAVYVAFGARVDMGNSTIDGALCSKRGGAIFAGSSAALSTETLVVRRAHAANGGLLYLADAATAIMRSTVAEDVSADENGGCIYASSGGLGLHGGTFSQCRASTLPSSYGRGGFLFADTHVTSLEGLTHLRVFGASSLSAPVVFTSNVLAQSQSVGRMFDSLGAYSAAFEAGNTSFASPITRFSVIRTTTNATVTLFPAHASGAALPEFSVEALDYYGNLAFAPPSHPLAIRFVVVIGSVNSSAGVGTGSSSGCTLSGDLRRTFSLSSRVDYSGIRLSTASLPAVCSLAFTPDNFLYDASSPLFQSFALSVNVSACDVGYERLANSTAPGTFYCSSIDVGGSSAPSSSGSNSGIVVVAVVVPVIVVCALVCAAAMFAIRRNRKRWNAKQMENFAQHVQTSMPGILSVELPEGSVTLCEQLGEGAFGVVHRSEVLMNGRLRVAAAKSLKPNSGVEQRIEFISEAEIMISLRHENIVSLVGVVTKTEPMLIVLEYCSYGALSIFLRKTDRGRHAAAAVSSVNGAAGANRGQLAQKTNAADLDLMFVRLAHDIAEGMCYLASQNIVHKDLAARNVLVAVNAFNELTAKIADFGLSRDVGDKGFYQKKKASAIPIKWTAIESLLHSTYDTQS # ORIGINAL: g14095.t1 original gene structure, not modified by PASA NODE_1798_length_9176_cov_43.0771 AUGUSTUS gene 7618 9176 . - . ID=g14095;Name=g14095.t1 NODE_1798_length_9176_cov_43.0771 AUGUSTUS mRNA 7618 9176 . - . ID=g14095.t1;Parent=g14095;Name=g14095.t1 NODE_1798_length_9176_cov_43.0771 AUGUSTUS exon 7618 9176 . - . ID=g14095.t1.exon1;Parent=g14095.t1 NODE_1798_length_9176_cov_43.0771 AUGUSTUS CDS 7618 9176 . - 2 ID=cds.g14095.t1;Parent=g14095.t1 #PROT g14095.t1 g14095 CNCNQCACEPDAFYVYDGAKCDCAHIPCRDNCNGNGVCGCGGICTCNSGFTGAACECRTGGSICQVGDSLCVHGSCVAGECLQNKCACSVGYTNDAKTGLCTVEVKACPIGPNGLVCNGNGNCNTTTGLCECTAPFSSTASNPACSCNTDSTICPNGCSGHGSCVCGVCVCEAGYKADVDSPSYDCSCPRGACKDDCNGHGSCVCGKCVCSKGYRGDFCDDYCPATGKTCAQLNCDTTGKTIDRTGKVLYNYCDEECGICRCVTGEGDDCRCSTDDCPSINAKACSGHGSCICAQCTCDAGWASPTTGCGCNTAKACPADNEDGAPDFCGVNKGRGRCVYGELNDYLNVVCTKCECSTDAAGSPLWSGDSCNCSTIACQMSDEPGNPPCGAKGKCICGKCKCEDGFLKDAAGNCLERCTIAAQSNCKNNGDTQACSGRGNCTCGECKCPWPWAGEFCEICTDESCYDCAAKTLCADCAQQPFCAWCGTNNDGGSPTGVCIKRIAQSNMKCDFNLTSTA* # PASA_UPDATE: g14094.t1, single gene model update, valid-1, status:[pasa:asmbl_2645,status:12],[pasa:asmbl_2646,status:12],[pasa:asmbl_2647,status:12], valid-1 NODE_1798_length_9176_cov_43.0771 . gene 1237 6218 . + . ID=g14094;Name=g14094.t1 NODE_1798_length_9176_cov_43.0771 . mRNA 1237 6218 . + . ID=g14094.t1;Parent=g14094;Name=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 1237 1294 . + . ID=g14094.t1.exon1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 1237 1294 . + 0 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 1476 1572 . + . ID=g14094.t1.exon2;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 1476 1572 . + 2 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 1780 1925 . + . ID=g14094.t1.exon3;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 1780 1925 . + 1 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 2126 2421 . + . ID=g14094.t1.exon4;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 2126 2421 . + 2 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 2736 2855 . + . ID=g14094.t1.exon5;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 2736 2855 . + 0 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 3184 3532 . + . ID=g14094.t1.exon6;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 3184 3532 . + 0 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 3775 3952 . + . ID=g14094.t1.exon7;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 3775 3952 . + 2 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 4459 4669 . + . ID=g14094.t1.exon8;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 4459 4669 . + 1 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 5002 5102 . + . ID=g14094.t1.exon9;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 5002 5102 . + 0 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 5311 5441 . + . ID=g14094.t1.exon10;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 5311 5441 . + 1 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 5736 5803 . + . ID=g14094.t1.exon11;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 5736 5803 . + 2 ID=cds.g14094.t1;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . exon 5979 6218 . + . ID=g14094.t1.exon12;Parent=g14094.t1 NODE_1798_length_9176_cov_43.0771 . CDS 5979 6218 . + 0 ID=cds.g14094.t1;Parent=g14094.t1 #PROT g14094.t1 g14094 MSGTGTCICKQGFRGTLCEECTSGRFGSQCAPCNVTCTIGDCDFGRGGDGTCKCKSGFGGTQCDQCQTGRYGFRCDLCPTCLNGGTCDEGIRGTGSCRCPANYAGNLCEKCAKGYYGPDCRQCVQCDADGGVCLDGLSGNGTCSCNVGFRHTKGNPLEICDDCDGVTRFGRLCTSCPDCGLHGTCRAGRAANGTCACSMGWSGLMCNECAKDFYGRTCTACPPCKEGTKCVQGLAGDGRCSSSDPVSSTTTGSSGGSPMAAVAGAAGGCVAVLAGLGIAYYYRASIAKALRARGWNVRMGANGSRDALAGSGYLDFEEASYVREYAMKNLSTISNTNVADYSMDLYTSIDESSLMNEIPRDRIRLGEKIGSGNFGDVWRGILYPENTVTAVKSLKEGATPEENKLFIAEAKLMAELKHPNIVRSIGVVTRGSPILLVLEFMSNGSLLSYLENKTEDDLSRKTLMGMCRDVAAGMVVLERKGLVHRDLAARNVLVDGDGTCKIADFGLARHLDSDYYFASSAQKIPMKWTAPEAIQYRKYSTASDVWAFGILCWEVFALGERPYGNISNAEAVALVERGDRLAMPAMANDRIYATMMSCWAAEPRERPAFIKLFSAFQGMILGQSRASQLPSGAAEGYVELDPAEAYALYVKPPDSYSINYESAQ* # ORIGINAL: g10178.t1 original gene structure, not modified by PASA NODE_3001_length_4558_cov_51.8189 . gene 3172 4260 . - . ID=g10178;Name=g10178.t1 NODE_3001_length_4558_cov_51.8189 . mRNA 3172 4260 . - . ID=g10178.t1;Parent=g10178;Name=g10178.t1 NODE_3001_length_4558_cov_51.8189 . exon 3172 4260 . - . ID=g10178.t1.exon1;Parent=g10178.t1 NODE_3001_length_4558_cov_51.8189 . CDS 3172 4260 . - 0 ID=cds.g10178.t1;Parent=g10178.t1 #PROT g10178.t1 g10178 MSAKLQNAKATLTRIVADLSPEDCLKFKEWVLSVADEVDRSVREASRIHDSNEEGDEGHGHGHGHGHGHGHGHHGGSCGCEAKAQPRGIAKIKKIIRALKGVVGVTAEAPQERILFPNIGEYEGCDANNTVHVDSFLYSEDDVDELVEAGRLSRQYCADCGSRNISDLNFISHSASLNQISFIFESLGDLKGKLVVDVGSRLGAMIYGAYFLSDASHIVGVEFSEYFCKIQRDMIAQFKLHDRASVVHADVRTQSDLLSQADVVVLNNVFQFFADRDEQQALWKFLAANITRPGCRLITIPSLEESLEEAGVDASLVTSWVRKIDLDYPAGPHDSHSDDGHSNDEGGTEEEGVHMYEVIASS* # PASA_UPDATE: g10177.t1, single gene model update, valid-1, status:[pasa:asmbl_5403,status:12], valid-1 NODE_3001_length_4558_cov_51.8189 . gene 2 3714 . + . ID=g10177;Name=g10177.t1 NODE_3001_length_4558_cov_51.8189 . mRNA 2 3714 . + . ID=g10177.t1;Parent=g10177;Name=g10177.t1 NODE_3001_length_4558_cov_51.8189 . five_prime_UTR 2 3 . + . ID=g10177.t1.utr5p1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 2 76 . + . ID=g10177.t1.exon1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 4 76 . + 0 ID=cds.g10177.t1;Parent=g10177.t1;5_prime_partial=true NODE_3001_length_4558_cov_51.8189 . exon 299 465 . + . ID=g10177.t1.exon2;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 299 465 . + 2 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 787 859 . + . ID=g10177.t1.exon3;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 787 859 . + 0 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 1052 1170 . + . ID=g10177.t1.exon4;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 1052 1170 . + 2 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 1523 1575 . + . ID=g10177.t1.exon5;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 1523 1575 . + 0 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 1803 1924 . + . ID=g10177.t1.exon6;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 1803 1924 . + 1 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . exon 2155 3714 . + . ID=g10177.t1.exon7;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . CDS 2155 2813 . + 2 ID=cds.g10177.t1;Parent=g10177.t1 NODE_3001_length_4558_cov_51.8189 . three_prime_UTR 2814 3714 . + . ID=g10177.t1.utr3p1;Parent=g10177.t1 #PROT g10177.t1 g10177 LVLVLVLVLVLVLVLVLVLVLVLVHLHKCSGGDIVKRGAARKEKYLFAMPGMFRPTAAGPLGTLARLNTPNPAMYIDFPEGRLVLLGTLVHPKNRLLVFQCKSSEVQCDEAYDKLVVFSEYKWIGTAADNPTEAPLPLPDSIAKTIEGSLSQVLPDLPPTQEISGDDVSEHDDDGSGADDDGGASHPASAKTTRPRRAAAVKATYVEKEELSVDESDSDNEENESKPKRAPAKLKRIIAKTSTPSTVARSSAVEDERVAPSQVSHASQASSQEGPTNNNASARKKRVATVKTTAKKVIQIDLETDDDDAEALDNALLVEEKAAPRSRPSAASKAKASAKTERAPDTFDSGFGSMHVPVRSERGATPSPAESDDELLKPSLFKWSPVVKKTPTGEEAARTPRAAQTGPRSASLKLFPANSGY* # PASA_UPDATE: g3992.t1, single gene model update, valid-1, status:[pasa:asmbl_5585,status:12],[pasa:asmbl_5586,status:12], valid-1 NODE_3113_length_4270_cov_37.2627 . gene 135 4149 . + . ID=g3992;Name=g3992.t1 NODE_3113_length_4270_cov_37.2627 . mRNA 135 4149 . + . ID=g3992.t1;Parent=g3992;Name=g3992.t1 NODE_3113_length_4270_cov_37.2627 . five_prime_UTR 135 135 . + . ID=g3992.t1.utr5p1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 135 292 . + . ID=g3992.t1.exon1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 136 292 . + 0 ID=cds.g3992.t1;Parent=g3992.t1;5_prime_partial=true NODE_3113_length_4270_cov_37.2627 . exon 519 1063 . + . ID=g3992.t1.exon2;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 519 1063 . + 2 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 1402 1645 . + . ID=g3992.t1.exon3;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 1402 1645 . + 0 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 1867 2076 . + . ID=g3992.t1.exon4;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 1867 2076 . + 2 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 2288 2462 . + . ID=g3992.t1.exon5;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 2288 2462 . + 2 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 2669 2873 . + . ID=g3992.t1.exon6;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 2669 2873 . + 1 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 3094 3216 . + . ID=g3992.t1.exon7;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 3094 3216 . + 0 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 3473 3673 . + . ID=g3992.t1.exon8;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 3473 3673 . + 0 ID=cds.g3992.t1;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . exon 3853 4149 . + . ID=g3992.t1.exon9;Parent=g3992.t1 NODE_3113_length_4270_cov_37.2627 . CDS 3853 4149 . + 0 ID=cds.g3992.t1;Parent=g3992.t1 #PROT g3992.t1 g3992 FSVREGIARMKEGAPILKVVSNGQPHYRTFKLSADETLLEWYSPKKADDRNSAAIAEFKEIRAGQTTPIFLKYNRADQIPLSLSIILNASKKISKAGTVSSFYNSISSKKAADGPTTIDLIFADASQYSSWKTALEYLVAKHNPSAHVPHISRAGTSPELSLGTSAGLGESSSYAPLSTSTSGSGGSGPSPFMSSMDLENFRRENEEARQALAVHEQRMSELLLEKDEIISVLQAKLSEIETSRARGAIAREPLARVIALKDRMTSKRKELQRMSDNFPEHNARISELVKTEEDLGQYIKPLEEMAVQLENYTIDGENLNNTLRYARALVEDVDALVQLRFTWFAKQLGDNAPATINDLFIRSPAERTHSVSLPPPAMFARGSQEGPLPDGSMPPPPPPGMPGAPPPPPMGLVSKGPQPNKPAVTPSIKMRQIYWKRIILDKTKWVDGATVWDNIDDDIAVTKDDVETAFGIRESSKEAAERRAAGIGAKKQTAVRILEKKRYEAVSIFMRKMPDARAILSYLLEMNVQKLPREITEQLILVLGTVEEMQLIEEAEKAGTVLDAPEQFLLDLHKFTNAKTHIRTWLFYLQFPETAGEIDSHVRQLLAAVQSVKSSRAFRKLLGVILVYGNYMNGGTNRGQADGFDLEILPKLRDVRDEKGASLYKYLVDFVKAKAPTVSMLPEELGAVRKARVVSLQQIKSAVATLGNDFRDIRPFAG* # ORIGINAL: g7428.t1 original gene structure, not modified by PASA NODE_3750_length_2829_cov_34.2959 AUGUSTUS gene 446 2191 . - . ID=g7428;Name=g7428.t1 NODE_3750_length_2829_cov_34.2959 AUGUSTUS mRNA 446 2191 . - . ID=g7428.t1;Parent=g7428;Name=g7428.t1 NODE_3750_length_2829_cov_34.2959 AUGUSTUS exon 446 2191 . - . ID=g7428.t1.exon1;Parent=g7428.t1 NODE_3750_length_2829_cov_34.2959 AUGUSTUS CDS 446 2191 . - 0 ID=cds.g7428.t1;Parent=g7428.t1 #PROT g7428.t1 g7428 MKSRREKGNSRAIADRVGREDPFDVVEGPHNVIVHLEHLPGSAALASDDDDDASGVSKRCDDSRQDRSLKPQGGHQSDRHIDSESKGARGSLCATESVQQSAAPRVFSGEPARATMQLKKEQRVGSASANSTTPGGPGDRIPVRMRLPSAIKSDSRAWKELSANNFHQENEERKVYMNVVVLNLADISTSTQSYTMRLELWVAWALTEEEVRNYIADPDNWKPNIHPQPTPWTINIEETTRMPFLSGRYTQVFMFRNKVVACECTLVTARFLESMELVNFPFDSQHFNFHIGLRCDCDIPLMIDEHNRVLQNSVESIGGFLNFDGRAMAKLKLDKKGCTLNVRTHLLSLQDFILHNIECEIENMERDVPFLHCSIRLSRNYQPYVFRVFVPMSIIMVSSTLAFRFDSEGALSDRLSFVATIMLTVVAFMFILSGALPQIPYLTLIDKYMTLAFGYVGWVGVMCVLLNWWDLEGSRAETTIFAIGIGFSIILHVALIFVFRHFREVEMRKLSMDRHTVSQLEDERLGQPKDRQEFLVHTDIHPVKANNVHEGTLRCQIAPEAAAGWLFEGQGRLIGKGELRK* # PASA_UPDATE: g7813.t1, single gene model update, valid-1, status:[pasa:asmbl_577,status:3], valid-1 NODE_1152_length_13520_cov_53.4753 . gene 8676 11203 . + . ID=g7813;Name=g7813.t1 NODE_1152_length_13520_cov_53.4753 . mRNA 8676 11203 . + . ID=g7813.t1;Parent=g7813;Name=g7813.t1 NODE_1152_length_13520_cov_53.4753 . five_prime_UTR 8676 9058 . + . ID=g7813.t1.utr5p1;Parent=g7813.t1 NODE_1152_length_13520_cov_53.4753 . exon 8676 11203 . + . ID=g7813.t1.exon1;Parent=g7813.t1 NODE_1152_length_13520_cov_53.4753 . CDS 9059 10834 . + 0 ID=cds.g7813.t1;Parent=g7813.t1 NODE_1152_length_13520_cov_53.4753 . three_prime_UTR 10835 11203 . + . ID=g7813.t1.utr3p1;Parent=g7813.t1 #PROT g7813.t1 g7813 MSGLHGDADTDEAIDALHERVREAWVTLARNQQTDGVDAILRDTLLRAWESLNERRSQRGISESRLDDDDPAVVDGGAAVGGIDNESLAGPVGGAGERAIPPQVDLDMEDAPAADAADDVSEPYHSEGDAHHDAEMGGDADSDGENDFVSLPSEGDSVSSDDGDFDDADDILFDAQQSQRTVITADDVRAGRDIQGIPWDRLTLTRATYRQTRLQEYSTYENPAFSANHLADMRDGVVETGRYFDFVCNNHGRRCAVVHFQLRNLLWATSKNNVYYMDRSCVHCWSPPSRQTRVVLNLEGGVGTDAVDRVQITTMAASADLVAAGGFNGEVYCRSLVTDRMIHTGRVTTEDNGITNAIEFSVTRSGQRILVSSNNDCSVRIFAIPSFSRLAQYTFDWAVNYLQMSPDGSLMCVVGDDSDGLICDSRTGQRVARLSGHKDYSFACAWSPNGTLVVTGNQDRTARIYDVRNTSRAIGVLATKMGAVRSLRFTSDGKCLGLAEPADFVHIYDATQPDFGSSQVIDFFSEIAGFSFTPDGDALFVGLADGTYGSLMEFARTKGDGIEERVYARRLRQSTQPLPPSSSLSRANAHR* # PASA_UPDATE: g7812.t1, single gene model update, valid-1, status:[pasa:asmbl_575,status:12], valid-1 NODE_1152_length_13520_cov_53.4753 . gene 2 5526 . - . ID=g7812;Name=g7812.t1 NODE_1152_length_13520_cov_53.4753 . mRNA 2 5526 . - . ID=g7812.t1;Parent=g7812;Name=g7812.t1 NODE_1152_length_13520_cov_53.4753 . five_prime_UTR 5447 5526 . - . ID=g7812.t1.utr5p1;Parent=g7812.t1 NODE_1152_length_13520_cov_53.4753 . exon 2 5526 . - . ID=g7812.t1.exon1;Parent=g7812.t1 NODE_1152_length_13520_cov_53.4753 . CDS 2360 5446 . - 0 ID=cds.g7812.t1;Parent=g7812.t1 NODE_1152_length_13520_cov_53.4753 . three_prime_UTR 2 2359 . - . ID=g7812.t1.utr3p1;Parent=g7812.t1 #PROT g7812.t1 g7812 MTRMSAVCRRARAGQLRRPAPTSMTRALLAVTVSVTALVVCLQGVSASTVGVDGTVDASGGESACMKEHCANGQASITASQDCAFLAASVKRTIKNNNDDAGSFDGDIRIVSTDDQGRPTGYTQYFHTCQANNKHFGVITDWCGAGRSMTIHLEAVECSVYSTWDAQATTSDQCQCRPGFHGTGGLASCFPCGSNAYKAEVGNGDCTLCGLGTAAQGSTSKDACKCAAGAFFDSSNAIPCTACPVDTYSSAANQDVACTKCPNYSSTKDHTGMTRITDCMCNDMFFPVLSDATTGTFQCRQITAPPQPSAPRVTSASDSTLMIAWDAVPETNGKITDITLHVGAVTGSAQANPQRISLGPAPSPPTYRVTQLKPNTRYEIYIEAFTKAGPTDGAKTYAATYDLGCADGMCPPGMATGAVDSGCTPCPTGTFQSQCKFNATCEVCPAGTYTEGTETKSSADCKLCPTGKYSHAGGSCVSCNAGYTCPGGSSTPTQNGYDEWYQGAAVSEIHIGSDVPRSDDGTGRVSGGKSSLDKRTVAGVIVGCFVLCAVVALAVCLRLACGRVCLRRIDVVLESASRDILVKETPSTSPTAHRHPFFLVKNVNMLRASMTLLIVVTILALWTYTAYDFAENRYMEVRTTIPVSGTAAVDTPVGTNAGHDETVHRTLADDPPVPRIEIVLLGFSESASNVVADVNVNPDSSSIGVGAETSATSFQCAVTSFALLSMDQLKHLANPIEQDTEANGFGGLLSEADIASCRSVGCALVTATPPDSARLYGTPIVTVSVRSTRGVALYAQHVRARLSVPSWKPSWFSWITYSRPTTEKNGRIWGPGMPLGARSLWAAVILSRALFRGPTGNINNIGYEMVPNHMSWEEPAPATSFVTDVATNITKYAGPLVLGLRVSVQSMAIEVRMTERISILQFLSSLLSFLGGVIALFGFITSVTLAIGKRCCNWNIGQDPDDFDETHGVKDVEGSKGSQGSTTFASIGRRFSEGALSLFRSSGRKGSSSSIEGTLRPLLETASDSHRE* # ORIGINAL: g7814.t1 original gene structure, not modified by PASA NODE_1152_length_13520_cov_53.4753 AUGUSTUS gene 11980 13353 . - . ID=g7814;Name=g7814.t1 NODE_1152_length_13520_cov_53.4753 AUGUSTUS mRNA 11980 13353 . - . ID=g7814.t1;Parent=g7814;Name=g7814.t1 NODE_1152_length_13520_cov_53.4753 AUGUSTUS exon 11980 13353 . - . ID=g7814.t1.exon1;Parent=g7814.t1 NODE_1152_length_13520_cov_53.4753 AUGUSTUS CDS 11980 13353 . - 0 ID=cds.g7814.t1;Parent=g7814.t1 #PROT g7814.t1 g7814 MCTYICIYVYNTTGSKKATRTFRQSAVPALAAAGHSAVIHDLQHHGHATELARTTALGSYDGIISSGGDGLFNEILNGLLTRSDGAYTRRPIPIVPFPMGSQNALAAAMGIRDIRRAILVTIKGEVGPLDVGSATELRGEIARAALEGRPPPDERASLPHENGGLGGDRTRYFACALYYGFMSDVLRDTLPRRWMGAARYAYCGFVRIVRGVRPYGATISFVPARAQRTRCGRCTGDDCVTCRVAHATATEGTLPGENGGESGLAKRTGGFTTVLFGCHAGRGTNIPEQGGMFPYGHVSDGFFDVVMLRPVTRMELLRFTFRVTSDGRSHLSLRDRRGAELVEYHKTNAAVLRREDRFVGFGLDGEYVDPPGSDCFYIRMHPGLVRVMLISGAMRMRVPGDMGGYKGLCRRVSDVLSMDFVRKVARKTKKLFTGKGASSSSGVGGASGDADRRPLLV* # ORIGINAL: g12411.t1 original gene structure, not modified by PASA NODE_4954_length_1116_cov_171.863 AUGUSTUS gene 184 1041 . - . ID=g12411;Name=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS mRNA 184 1041 . - . ID=g12411.t1;Parent=g12411;Name=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS exon 865 1041 . - . ID=g12411.t1.exon1;Parent=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS CDS 865 1041 . - 0 ID=cds.g12411.t1;Parent=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS exon 481 671 . - . ID=g12411.t1.exon2;Parent=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS CDS 481 671 . - 0 ID=cds.g12411.t1;Parent=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS exon 184 395 . - . ID=g12411.t1.exon3;Parent=g12411.t1 NODE_4954_length_1116_cov_171.863 AUGUSTUS CDS 184 395 . - 1 ID=cds.g12411.t1;Parent=g12411.t1 #PROT g12411.t1 g12411 MEIKHGNVRVLALTAFALFALCEAETLTFTLIHTGSLRGFVQEQNISTTYLQANGNLTSFAKTSTFGGLPRIRTFVDKIRSQRNHTVLALDGGQVIGYTPFDQFFKGDASKFIFQMIKYNAIGLGTSDFFNGPQVYVDGFTKNVLYDVVISNLDISGAASAPVRSALKNYAIYDVPTTSGSTMKVGVVGWVDL # ORIGINAL: g3446.t1 original gene structure, not modified by PASA NODE_6622_length_534_cov_128.523 AUGUSTUS gene 1 507 . - . ID=g3446;Name=g3446.t1 NODE_6622_length_534_cov_128.523 AUGUSTUS mRNA 1 507 . - . ID=g3446.t1;Parent=g3446;Name=g3446.t1 NODE_6622_length_534_cov_128.523 AUGUSTUS exon 1 507 . - . ID=g3446.t1.exon1;Parent=g3446.t1 NODE_6622_length_534_cov_128.523 AUGUSTUS CDS 1 507 . - 0 ID=cds.g3446.t1;Parent=g3446.t1 #PROT g3446.t1 g3446 MATVVEAPLKGAHDSNMQMVTVPASPSAVEPQRRQQAIEVLVRMMHEQLSHAGTARVEAHIRARYSDWDDVRNIVRRVVRTCRVCQTAGDAREREVVTPLHPLPIVTKPMARVAIDLLSLTRSTGGSRYVFGAQDAATKFMWLVPMTTKAAEDVVLIMTAYVLPWGIPA # ORIGINAL: g2963.t1 original gene structure, not modified by PASA NODE_7300_length_451_cov_51.4282_potentialcontaminant AUGUSTUS gene 149 357 . - . ID=g2963;Name=g2963.t1 NODE_7300_length_451_cov_51.4282_potentialcontaminant AUGUSTUS mRNA 149 357 . - . ID=g2963.t1;Parent=g2963;Name=g2963.t1 NODE_7300_length_451_cov_51.4282_potentialcontaminant AUGUSTUS exon 149 357 . - . ID=g2963.t1.exon1;Parent=g2963.t1 NODE_7300_length_451_cov_51.4282_potentialcontaminant AUGUSTUS CDS 149 357 . - 1 ID=cds.g2963.t1;Parent=g2963.t1 #PROT g2963.t1 g2963 YTYETTELTWKDGDATSKAISFLLVNDNVYQDSIETVVLSMVDAMAVRTTTVTGDGGNCTIFFKDDGDR # PASA_UPDATE: g621.t1, single gene model update, valid-1, status:[pasa:asmbl_9847,status:3], valid-1 NODE_88_length_42051_cov_43.0654 . gene 7790 11873 . + . ID=g621;Name=g621.t1 NODE_88_length_42051_cov_43.0654 . mRNA 7790 11873 . + . ID=g621.t1;Parent=g621;Name=g621.t1 NODE_88_length_42051_cov_43.0654 . five_prime_UTR 7790 7824 . + . ID=g621.t1.utr5p1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 7790 7983 . + . ID=g621.t1.exon1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 7825 7983 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 8194 8322 . + . ID=g621.t1.exon2;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 8194 8322 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 8555 8689 . + . ID=g621.t1.exon3;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 8555 8689 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 9323 9489 . + . ID=g621.t1.exon4;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 9323 9489 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 9692 9848 . + . ID=g621.t1.exon5;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 9692 9848 . + 1 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 10161 10381 . + . ID=g621.t1.exon6;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 10161 10381 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 10563 10911 . + . ID=g621.t1.exon7;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 10563 10911 . + 1 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . exon 11152 11873 . + . ID=g621.t1.exon8;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . CDS 11152 11568 . + 0 ID=cds.g621.t1;Parent=g621.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 11569 11873 . + . ID=g621.t1.utr3p1;Parent=g621.t1 #PROT g621.t1 g621 MTGKLLIAALLVATAACMCTALPTLDLAAIQAGEWTQGETVFRDKSVYVHESKMHTVVVDKLEYTAPLHPLELIPRIEKSKQDRSTFVSASPIPDQYYHFIPEYIGTIRAGEPISWDAPCFKNNTASVQMQNDGTATITFNVEKSSSLLCGDDYVIMTVSSWHLSAFELHGEHKVTWKQLSADEVDDVNRNGFRVFRFDESMTSTIADIYETAALFLGALDGLHGPHVPDAVANKNIQFLKDYANFELPNRTVIDLPISESDIHSGDVFGILRLDGLDPLICWGTGGRLGHTAVALRIDGELYVLESQTKSNYWPKNLIQRNKFSDWIANAINADYNVVLLPLSAENRAKFDEKAALDWFTGGIEGLLYGFPNFLSSWLDVNQANLPPPLDENFVMTGFALFDPIMDEMSAKLHFPSLWKEAFNKRLGTVNLTAVEAYAEAAKHGMTFADLVTMPEHDEWIYSGSPYWHEGPSMVCNVFVCNIFKAAGLFKGVANFNCAETVPLDLYEMQMYDDVATALPGCAAKEPGSQLCQLLGKHVINLPHFNTVKPFDGMRAKCPSTPPTYSDRFAPGTDSTC* # PASA_UPDATE: g625.t1_g626.t1, single gene model update, valid-1, status:[pasa:asmbl_9846,status:12], valid-1 # PASA_UPDATE: g625.t1_g626.t1.1.5b6bee88, alt-splice addition, valid-1, status:[pasa:asmbl_9845,status:25], valid-1 NODE_88_length_42051_cov_43.0654 . gene 36217 39732 . - . ID=g625_g626;Name=MERGED%3A%20g625.t1 NODE_88_length_42051_cov_43.0654 . mRNA 36217 39732 . - . ID=g625.t1_g626.t1;Parent=g625_g626;Name=MERGED%3A%20g625.t1 NODE_88_length_42051_cov_43.0654 . exon 39588 39732 . - . ID=g625.t1_g626.t1.exon1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . CDS 39588 39732 . - 0 ID=cds.g625.t1_g626.t1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . exon 39327 39459 . - . ID=g625.t1_g626.t1.exon2;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . CDS 39327 39459 . - 2 ID=cds.g625.t1_g626.t1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . exon 36968 37146 . - . ID=g625.t1_g626.t1.exon3;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . CDS 36968 37146 . - 1 ID=cds.g625.t1_g626.t1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . exon 36611 36814 . - . ID=g625.t1_g626.t1.exon4;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . CDS 36611 36814 . - 2 ID=cds.g625.t1_g626.t1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . exon 36217 36489 . - . ID=g625.t1_g626.t1.exon5;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . CDS 36368 36489 . - 2 ID=cds.g625.t1_g626.t1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 36217 36367 . - . ID=g625.t1_g626.t1.utr3p1;Parent=g625.t1_g626.t1 NODE_88_length_42051_cov_43.0654 . mRNA 36217 37797 . - . ID=g625.t1_g626.t1.1.5b6bee88;Parent=g625_g626;Name=MERGED%3A%20g625.t1 NODE_88_length_42051_cov_43.0654 . five_prime_UTR 37662 37797 . - . ID=g625.t1_g626.t1.1.5b6bee88.utr5p1;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . exon 37520 37797 . - . ID=g625.t1_g626.t1.1.5b6bee88.exon1;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . CDS 37520 37661 . - 0 ID=cds.g625.t1_g626.t1.1.5b6bee88;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . exon 37280 37412 . - . ID=g625.t1_g626.t1.1.5b6bee88.exon2;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . CDS 37280 37412 . - 2 ID=cds.g625.t1_g626.t1.1.5b6bee88;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . exon 36968 37146 . - . ID=g625.t1_g626.t1.1.5b6bee88.exon3;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . CDS 36968 37146 . - 1 ID=cds.g625.t1_g626.t1.1.5b6bee88;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . exon 36611 36814 . - . ID=g625.t1_g626.t1.1.5b6bee88.exon4;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . CDS 36611 36814 . - 2 ID=cds.g625.t1_g626.t1.1.5b6bee88;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . exon 36217 36489 . - . ID=g625.t1_g626.t1.1.5b6bee88.exon5;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . CDS 36368 36489 . - 2 ID=cds.g625.t1_g626.t1.1.5b6bee88;Parent=g625.t1_g626.t1.1.5b6bee88 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 36217 36367 . - . ID=g625.t1_g626.t1.1.5b6bee88.utr3p1;Parent=g625.t1_g626.t1.1.5b6bee88 #PROT g625.t1_g626.t1 g625_g626 MSELRITPVLSQADSLAPATLPTTFGNENGKELMMLESVLSQALLGSDESVLDFIDKFGWEKASLMNVGDVKGKIVDDVVAQALAAKTPGKDQLVFVELGCYCGYSAVRIGRLLRRWFESVANVNNATRPHFYSLEINPIYAAVAQKITTHAGLGEYVTIILGAGADSIISLRDILGISKFDFVFIDHWKDMYLADFKILENAGVLHKGTVVCADNILYPGAPDYLKYVEDSPKLTTVLHRSRVEYHDDKEDAVAVSICL* #PROT g625.t1_g626.t1.1.5b6bee88 g625_g626 MSVSVVTPVVVLSTGSVQQADLPSSFDENAKESKVLKIVQSNAHSNEESVMEVMDKYGWEENFMMNVGDVKGKIVDDVVGETLAKKVAGIDRLVFVELGCYCGYSAVRIGRLLRRWFESVANVNNATRPHFYSLEINPIYAAVAQKITTHAGLGEYVTIILGAGADSIISLRDILGISKFDFVFIDHWKDMYLADFKILENAGVLHKGTVVCADNILYPGAPDYLKYVEDSPKLTTVLHRSRVEYHDDKEDAVAVSICL* # ORIGINAL: g620.t1 original gene structure, not modified by PASA NODE_88_length_42051_cov_43.0654 AUGUSTUS gene 4568 5176 . - . ID=g620;Name=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS mRNA 4568 5176 . - . ID=g620.t1;Parent=g620;Name=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 5078 5176 . - . ID=g620.t1.exon1;Parent=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 5078 5176 . - 0 ID=cds.g620.t1;Parent=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 4864 4926 . - . ID=g620.t1.exon2;Parent=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 4864 4926 . - 0 ID=cds.g620.t1;Parent=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 4568 4681 . - . ID=g620.t1.exon3;Parent=g620.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 4568 4681 . - 0 ID=cds.g620.t1;Parent=g620.t1 #PROT g620.t1 g620 MSDQQKDSGNQNAPNAHKPINEAKGLHALHENKRGLVTAEDENHKIYPNVRPETLERLSKDQNMDDSQQQSTNTGGQKGHSRQTDHGRQQK* # PASA_UPDATE: g624.t1, single gene model update, valid-1, status:[pasa:asmbl_9844,status:12],[pasa:asmbl_9848,status:12], valid-1 NODE_88_length_42051_cov_43.0654 . gene 26742 35855 . - . ID=g624;Name=g624.t1 NODE_88_length_42051_cov_43.0654 . mRNA 26742 35855 . - . ID=g624.t1;Parent=g624;Name=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 35645 35855 . - . ID=g624.t1.exon1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 35645 35855 . - 0 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 35042 35471 . - . ID=g624.t1.exon2;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 35042 35471 . - 2 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 34886 34925 . - . ID=g624.t1.exon3;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 34886 34925 . - 1 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 32656 34715 . - . ID=g624.t1.exon4;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 32656 34715 . - 0 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 32333 32509 . - . ID=g624.t1.exon5;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 32333 32509 . - 1 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 31330 32168 . - . ID=g624.t1.exon6;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 31330 32168 . - 1 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 28371 31177 . - . ID=g624.t1.exon7;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . CDS 28374 31177 . - 2 ID=cds.g624.t1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 28030 28134 . - . ID=g624.t1.exon8;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 27580 27588 . - . ID=g624.t1.exon9;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . exon 26742 27370 . - . ID=g624.t1.exon10;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 28371 28373 . - . ID=g624.t1.utr3p1;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 28030 28134 . - . ID=g624.t1.utr3p2;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 27580 27588 . - . ID=g624.t1.utr3p3;Parent=g624.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 26742 27370 . - . ID=g624.t1.utr3p4;Parent=g624.t1 #PROT g624.t1 g624 MGNEGVEEGEVAVPATAHPPVEDGEIGPAEDGELPFDPKEIERPSPRTPYAVPPPQPVSSGRKKANSRGEQKSKARKAVPPTNESFDELLARHKAVQERLLEIDVLEAVSRSIPPRDHLPPRAVDARPEYRPDPPLPPRPPRRQPPPPPHEYDAPPPPPFGRPHQGPEGAYMDRMPAPPPPYEFDSRGPPNRRDFGPHPPPHMHPHSAPAMHYAIHESVRDHHQQFQPQPMHGGWDDPYEYEIRRPMHMGDGWPPPGEQYEHPNGIAQRMEYESGSRLLSPQRLPQYGRSPASFGSNMPPNSFSGGDSIEVVDMEIDDAPESNLALTAASSASAGDIPTETNSQSTGGTAADKDDDGGDLDLNELRKRALMSLKGKPKPKPKAKVTVAVAAVDAPSEVTVVAAVPESQHEVAPAAPPKPPIPATAGSVAKKAAPVPLKKAAVLATAKRLVAAAKATSASVPATGAVRSAPAAVAIPAVNTVYRPTPPLPGAARFGGSMYGHIPPEDRLIIQIGDSSSDESDESSEEEGRKESQNGTTRGMSDTDILARMRQIVRERMDATDTARSTTASGTATPTGVPAVVAATSTQLQAATAATSRLAKHEQEYQALKAAIACRQAEIQAKIAAKKSVGTAVSLAEKEWPATPDVAGNVPALLHDKREPTPSVDVVMDDAGSRAEISPPVAGNSSLRVDSISNNSEHSKEPAATVPIARSKRPRDDNGDADEQGKGIIADGASGSSGGSVPSAVVVAAASPAKKPRFASAPAGVRLPTKPPLKIPPSLVAKGGLGMGAGARAGAGVSVGVAPPATAKGPAAKAVPGATPAVPQKPAPKALSAASALASRVAVHPIAPSVLEPAPAKKPVRVDRNLELLRGQVQAAAAQLDVERQAGETTKKRLLMMQRSRDEASLAVAKSESRVQELKGLLAAEEERLAKAMLHKTKYADESVNIERDIDARQPVVQRLEQNLILAKEALERYEEKLRHSLASQSDRLEKKVAAMKDSLARGDIPRADMPSSAPATNTSADATASTVSSLSAMPAIQQALLTQLRRRHAARATLASAMNVSPATAGETFVSFGGVLCVPDALSTPDAALESEDTIAIIASHASNGPSGRVAGSLASVAAARAAGKGRMAVLVGGESSSASSRKPIAFRALGKYESPLLSLRAYRLNPYYRTKAGLSLSAPFASNKVDTQRPICRFEMHGVCNDHSCPYQHARDYMLPEEELYLDFASYVTCPSARNAVAVQPGQGTPQAVRDIVTKTRQRYGGRLTRDEMCLIISNEVTLASGMSSGAVFSEPRKWRPLQPPRPEIPTELDFGIRWSDDEDETPVPHPPNRHHNHKGGSANSKANDSHGGDKRVEDGVTVQQQNEGAVGVANAEKNAPAEFLKDGDTNDVDAAKDAPAAKFARSRLDAHVEQRYYRRESAHWGPSDYDSAMDAHPHDVNLVLEYAERTYTALASCLVDATTSVADPFAEHPSPEEVKRMGGSLGVLQRGLAVNSGSAVLWYHAVSLCARMAPQSVQLQLLCEDALLQCRDVDETLVWACLLTSGNSAWKSRALDLWMERLRAAIDDLSPGSADRSRQSRLLVEALLASAQVDVIAGRMERAVSRLLVWVGAGDISNGEFDTNPSSGAQISAHAGPLLASLEECALPAVDVAVAMAAHLDVGDLSLLWLCLVHFLARRRLPDLFDIDSRSFGRLCFPSNAPVPLRWDVSAVNTILPPRHHMARLFEIGVDALEAGAKKVQSTDPSLTWPHNDAHAPLVVAQMTYEFGTAGGIDGARTVARSALARWGSPLPDVWLALAMLEEKVGTTEPVRAIYAEAALACNAETSLWYFAAKVEASVGNISGAICLLCRAAARHFAAGAAAEFLGRHAGADKTLTDAFCGSLSVADSGAIARVNAGGWAATVDACVLLFNKLLGRPVPYNAGLPERVSARSRAAPMWMCLCMLLELTLPAGDAAVADAFEGALADVRGGGERWSVWHEYLVYELSQLGARARGEFSGGASASSPSLSAGRTVSEQLADFTRIVNRCISSLVDVTAGEAGSSRVVLNARCAEVVSMYARALPQQQALAVYEAALQRMPSSVPLALAGARVALDSKLHERARSMLASALRAQPGSALLWRAAAALESATAPIAHARWTYHSAAMALPHDAELWADYAAFEAANGAPDGSGTAKVLELARAAAVVVPA* # PASA_UPDATE: g618.t1, single gene model update, valid-1, status:[pasa:asmbl_9842,status:12], valid-1 NODE_88_length_42051_cov_43.0654 . gene 80 1591 . - . ID=g618;Name=g618.t1 NODE_88_length_42051_cov_43.0654 . mRNA 80 1591 . - . ID=g618.t1;Parent=g618;Name=g618.t1 NODE_88_length_42051_cov_43.0654 . five_prime_UTR 1561 1591 . - . ID=g618.t1.utr5p1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . exon 1530 1591 . - . ID=g618.t1.exon1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . CDS 1530 1560 . - 0 ID=cds.g618.t1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . exon 1196 1366 . - . ID=g618.t1.exon2;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . CDS 1196 1366 . - 2 ID=cds.g618.t1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . exon 910 977 . - . ID=g618.t1.exon3;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . CDS 910 977 . - 2 ID=cds.g618.t1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . exon 513 582 . - . ID=g618.t1.exon4;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . CDS 513 582 . - 0 ID=cds.g618.t1;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . exon 80 150 . - . ID=g618.t1.exon5;Parent=g618.t1 NODE_88_length_42051_cov_43.0654 . CDS 80 150 . - 2 ID=cds.g618.t1;Parent=g618.t1;3_prime_partial=true #PROT g618.t1 g618 MHLFHGLLCLAIVGVACGQGNPAFENEVFRLVNVMRAQNGLAALCLNSKLQVAAELHTIDQDTHNTMSHTGSDGSAPGDRVSAQGYSWNSVAENVAQGQRTPAEVMNSWMNSAGHKANILSGNTMIGVGFSNFYWTQ # ORIGINAL: g627.t1 original gene structure, not modified by PASA NODE_88_length_42051_cov_43.0654 AUGUSTUS gene 40365 42051 . + . ID=g627;Name=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS mRNA 40365 42051 . + . ID=g627.t1;Parent=g627;Name=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 40365 40472 . + . ID=g627.t1.exon1;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 40365 40472 . + 0 ID=cds.g627.t1;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 40633 40789 . + . ID=g627.t1.exon2;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 40633 40789 . + 0 ID=cds.g627.t1;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 41120 41242 . + . ID=g627.t1.exon3;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 41120 41242 . + 2 ID=cds.g627.t1;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 41475 41632 . + . ID=g627.t1.exon4;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 41475 41632 . + 2 ID=cds.g627.t1;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 41992 42051 . + . ID=g627.t1.exon5;Parent=g627.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 41992 42051 . + 0 ID=cds.g627.t1;Parent=g627.t1 #PROT g627.t1 g627 MTKLTVYIVQTQGVVGDVAVNVALAANHARDAVEKKARLLVLPELYTSGYNLSIEEVQENAVPVDGPVVTQLKDCARLNGIAIITGLLELGSDGKIYNSAIAISESGELAAHYRKTHLYSNHERSRFATPSVDDPAAQYQPFLMCGVRMALLICYDIEFPEPARILGIRGVDFIVVPTANFWMVDKDDPAKEHDIGFVGDIL # ORIGINAL: g623.t1 original gene structure, not modified by PASA NODE_88_length_42051_cov_43.0654 AUGUSTUS gene 22022 26258 . + . ID=g623;Name=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS mRNA 22022 26258 . + . ID=g623.t1;Parent=g623;Name=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 22022 22217 . + . ID=g623.t1.exon1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 22022 22217 . + 0 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 22470 22673 . + . ID=g623.t1.exon2;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 22470 22673 . + 2 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 22863 23079 . + . ID=g623.t1.exon3;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 22863 23079 . + 2 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 23396 23489 . + . ID=g623.t1.exon4;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 23396 23489 . + 1 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 23749 24158 . + . ID=g623.t1.exon5;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 23749 24158 . + 0 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 24320 24472 . + . ID=g623.t1.exon6;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 24320 24472 . + 1 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 24689 24771 . + . ID=g623.t1.exon7;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 24689 24771 . + 1 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 24914 25019 . + . ID=g623.t1.exon8;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 24914 25019 . + 2 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 25563 25652 . + . ID=g623.t1.exon9;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 25563 25652 . + 1 ID=cds.g623.t1;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 25901 26258 . + . ID=g623.t1.exon10;Parent=g623.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 25901 26258 . + 1 ID=cds.g623.t1;Parent=g623.t1 #PROT g623.t1 g623 MMEEVDLVDRGHVPYKCATCHARCLMQTDSDQPSMPISSVSSVSCHSYYACLCGHYEIVKYLLEKGARCEENTFDGERCMYGALTADIKRLLKDSKAVTAASIQRDPFHEFLRRCLDSIALSNLLTSSHGHPHGTLHSPFSPYSGSARFADVEFDVRGTSFHAHRAILAARCPKFRELFREKWRRRRRISLPKKALDPVAFGAVLRYLYTERLELPMTKLGACWVLCRYCGLDELAVLLKENAGVARGESDWVVIDPPVDAHALRRDFAVIAAYMKHRGLGSRGTYNGHTAAHTGDDAAPERKGSGDKDGGHTGGDKDGGHTGGDGCDSMDIVWMTEGGTEHVTLSDGNPFQCDVCFRVDGCLFPSHRIFCCGRSEYFEIMLSGRFKEASLFTDGRVAGNASEEHSIPVVHVGGVTADTFAKILEYIYTDRVEIDFETATELLTMADLFMLPDNAVDFYRAALSFQLARLEEACVLYMTDHIREIVVRDDFADLVLQDASAITNRQETDSIPLVDEIRFNIRVGSAAQRPSQQHQPQLQRGHVGATHSSTRNAASTLDPARVMMGGGHAGDVASLADATGAGDARIGGVDGGSEDSDDDDDEFVDETEEKERAEKICLLEGLLKKLGIDTVTASEH* # ORIGINAL: g619.t1 original gene structure, not modified by PASA NODE_88_length_42051_cov_43.0654 AUGUSTUS gene 3354 4211 . + . ID=g619;Name=g619.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS mRNA 3354 4211 . + . ID=g619.t1;Parent=g619;Name=g619.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS exon 3354 4211 . + . ID=g619.t1.exon1;Parent=g619.t1 NODE_88_length_42051_cov_43.0654 AUGUSTUS CDS 3354 4211 . + 0 ID=cds.g619.t1;Parent=g619.t1 #PROT g619.t1 g619 MAASCAQRVRTVGILLFRGFEPLDVFGPLEAFVIAEHVPHSRSISSLRQVSATNCPTKIQALEPLQRGTASSSPQSAADDKPFRVVTIAESLDPVAMNGGVCVVPQHTTTDYPPLSVLLVPGGYGIRTEYKNEKLVEFVRSNAVNLPRPSPLVLGGPEGTPGAPDGTKTEWNGKDLEVIASVCTGASLLAVAGVLAGVHVATTNRRAIDWVTSVSPPHIPWSERHRFADCGSVVTSAGISAGTDMALHLVRRMVGFESAKVAARRMEYTWNFDHMDSEFATTNAV* # PASA_UPDATE: g622.t1, single gene model update, valid-1, status:[pasa:asmbl_9843,status:12], valid-1 NODE_88_length_42051_cov_43.0654 . gene 12077 20925 . - . ID=g622;Name=g622.t1 NODE_88_length_42051_cov_43.0654 . mRNA 12077 20925 . - . ID=g622.t1;Parent=g622;Name=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 20345 20925 . - . ID=g622.t1.exon1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 20345 20925 . - 0 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 19976 20074 . - . ID=g622.t1.exon2;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 19976 20074 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 17836 19782 . - . ID=g622.t1.exon3;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 17836 19782 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 16989 17309 . - . ID=g622.t1.exon4;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 16989 17309 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 15298 16805 . - . ID=g622.t1.exon5;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 15298 16805 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 14246 15077 . - . ID=g622.t1.exon6;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 14246 15077 . - 2 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 13538 14014 . - . ID=g622.t1.exon7;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 13538 14014 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 13188 13361 . - . ID=g622.t1.exon8;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 13188 13361 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 13045 13093 . - . ID=g622.t1.exon9;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 13045 13093 . - 1 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 12768 12851 . - . ID=g622.t1.exon10;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 12768 12851 . - 0 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . exon 12077 12514 . - . ID=g622.t1.exon11;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . CDS 12452 12514 . - 0 ID=cds.g622.t1;Parent=g622.t1 NODE_88_length_42051_cov_43.0654 . three_prime_UTR 12077 12451 . - . ID=g622.t1.utr3p1;Parent=g622.t1 #PROT g622.t1 g622 MRISRKKAKKADADPAPTVATSDASSSSSSASKKDKDKKNKKKDKLAIVTPLPSVTESPSPIRKDSGVKSTFNNADAPEDAAVRAPSVQTQQPQQQPANTSSASRPPSTAHVTAAEEVPASVPASSNFVETPQPPQKYSLTRIGRLSARSPLFSIAVRPSDRETAAALWQSVLRESVAVVVVLRNGLSGLGSAWQFYPDEGEEMYLRGVCVCGNEAPQTAVGSHKWSEVDVRATEPSVRRSSSFAQKELSALSGNTSSPSKASSSKTRQETSVGILECDALFSLESLSCVVADASARVTQSSPLHSSGHVLVLCDPAASESAGLYCIAHACVAEARASSKITVDVIAAHAEAGRMLRETPFYDFRRAFEVESTRELWTTLGLSASAERGLGWSFPRIEIPLSKSPQQERNEENVFAMSTSATAGAVEGGRMDLDGMSTFRGTGPAVEVHASHVRADTGLPEALGELSLGNGHPGGQIATESDASASVSPIVAVAPASESGAHSAPNAPTHIAIDAHSEAVAPKDSVQESAHSDGESRDAHLQEADTDSLSEGKRTAAAHAHPMPTIEIDTSPAEDPIATALTHETLSGTHSMSDDGDGADGLNERATVRREASAPASSGPGAHVTLRGALSEPIRTGRRSSSGSALDEMHHHHAHAHAHAHTHAKSGHGGHGDMLGVEGTAEKKKKSRRQSLSNWLRGTAPSSSATPATPTSHPLLATGTPDASHTASPESVSTSPLPGNNLAWHSNGTDHDAVADSVGVNPFVAYFQSPQPINASLRDDNLVGHPFTSPSAASNSDTSGLPNPFAARLSTEEVDDWPLQRGDVTASSVENPFDREHAHASWHFALETKASSGRQPERARSNSMSLNPFETAFAPNAPEWDSIHPSSQSLASAPSRRFSSFFAAFSEKDTGKLEGEALSMHTASSEFHALVAADAHADASELYWSLKKRLPEHCKGNPALATSLHRVLATWMYRLPLAATSLRYFVHVLHSVARLDRVSSLALARLLVDMGRVTLFDKLYRENRVGPSQSLAEFLYECSEFGTIESETRFSRHVSQSRGRRHSRSASVAQELGSIPEDGGSNAPNTPSHSHSHLHDPSVAVPASGSDATQSAEAISSGAPSTPVTPYLRRSVSSSGGDPDAGESGVNTLRVLSIRASADVKAHWRVLEALLALHDCAGASDYLIHVANTWVSGHAAAVDGTPAPHLGVSSASAGVTPGFDVFSPVEYVERMCAIDAEGAVDVAVLLATAVRVRPRGKVGGFVATLARAIHRAVPPSQTHAALAVRFLQRCLDESASVSGRLPLVDCEASIFNTLLELHLAHTRPPNASAAIPILTGTVQFDRRLAADLCLRAGMTLWHLLLLVDSRDRLVVFDADARRRVRPFWGDVSAALSKSAPTLSPGELDAVLALDTLGADGRIACLEGLLMSLGAARGLPRMTGGHVIDACVRLAVHVTTRDGVTWETVAALFERHDRDDLLVKFARETSAITPPDHIQSIFADGGTRFVRLCEAAFRCGLVADACSIVRTRLGMLSPAAMSSYVAASVFLKDYAEVRRVCQASSSLDPIALKRILFVDLDRAWDLADARSETKTQSGAAISGNSFSPTHPTDDHFDGDVDRRDEVLALISLCVRYGMVEDLVHFVALRGRLDDITRSDDALALCTPSVLPSTVSTLLALGWPRARILSAIEPFVSGGRALAVHDNGRAAARAVAVIDDHFSQLCSPGGGDSDPHGASWDDGVSIDPMRSVRIVRRLASACDLEEWKRCLAPTTNAASHHGDPHVSATGEHSSATLPHMLHSQSQSSTDRAGLSALTSSTHVASPTHLTENRGEDAFPDTFDFAAAKIEEEEELAQSHARQESFAQSSHASHASLHEHHDRHEHHEHHCNNDDNNNNNNNTNANNHDAAADVASDTCSVGPAASDNRRAQAIVAALRDGVGFACFSSALECEVAVNAFVAVGLGLEASEWLESALLRNFELSQRRDIQTLLCRLAVRYSPQTLPSILSFLDNVDLLVVASEARSAGLLSEYRSLMVQAGHPFEAQLPFQ* # ORIGINAL: g13973.t1 original gene structure, not modified by PASA NODE_4613_length_1404_cov_36.8503 AUGUSTUS gene 108 1244 . + . ID=g13973;Name=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS mRNA 108 1244 . + . ID=g13973.t1;Parent=g13973;Name=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS exon 108 233 . + . ID=g13973.t1.exon1;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS CDS 108 233 . + 0 ID=cds.g13973.t1;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS exon 338 435 . + . ID=g13973.t1.exon2;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS CDS 338 435 . + 0 ID=cds.g13973.t1;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS exon 660 827 . + . ID=g13973.t1.exon3;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS CDS 660 827 . + 1 ID=cds.g13973.t1;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS exon 1160 1244 . + . ID=g13973.t1.exon4;Parent=g13973.t1 NODE_4613_length_1404_cov_36.8503 AUGUSTUS CDS 1160 1244 . + 1 ID=cds.g13973.t1;Parent=g13973.t1 #PROT g13973.t1 g13973 LRVMKHPSLKVLVTIDAHKGDVNDADFHPKGTQIASVGLDKKVIVWRISDGKQVCTIDHSKAIPNALQYKLQSCRYGQIMSADGNRQNVLYTVHCHLKLPSYVACWAADGDYKLIRTSVIEKGPVTAMTLSDNGERIAFGSAEGVISFFSASKLRVSW* # ORIGINAL: g13255.t1 original gene structure, not modified by PASA NODE_1973_length_8261_cov_61.4892 AUGUSTUS gene 6231 7646 . + . ID=g13255;Name=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS mRNA 6231 7646 . + . ID=g13255.t1;Parent=g13255;Name=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS exon 6231 6422 . + . ID=g13255.t1.exon1;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS CDS 6231 6422 . + 0 ID=cds.g13255.t1;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS exon 6670 6739 . + . ID=g13255.t1.exon2;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS CDS 6670 6739 . + 0 ID=cds.g13255.t1;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS exon 7262 7348 . + . ID=g13255.t1.exon3;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS CDS 7262 7348 . + 2 ID=cds.g13255.t1;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS exon 7537 7646 . + . ID=g13255.t1.exon4;Parent=g13255.t1 NODE_1973_length_8261_cov_61.4892 AUGUSTUS CDS 7537 7646 . + 2 ID=cds.g13255.t1;Parent=g13255.t1 #PROT g13255.t1 g13255 MVEASTLVNLATPGTVTVGGGSTASQERPPKKKIDLLDYRRFDKWSEVDGDDGIHEIFDVSGDEGVTKIIKKDAYPNDIPPAHSTVLVHYVGRLSTGEVFDSSRERKKRFEFTLGEGKVIKAWEAAVATMRVGEIAEITCKPEYGERAFALH* # PASA_UPDATE: g13254.t1, single gene model update, valid-1, status:[pasa:asmbl_3145,status:12], valid-1 NODE_1973_length_8261_cov_61.4892 . gene 190 5341 . - . ID=g13254;Name=g13254.t1 NODE_1973_length_8261_cov_61.4892 . mRNA 190 5341 . - . ID=g13254.t1;Parent=g13254;Name=g13254.t1 NODE_1973_length_8261_cov_61.4892 . five_prime_UTR 4872 5341 . - . ID=g13254.t1.utr5p1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 4679 5341 . - . ID=g13254.t1.exon1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 4679 4871 . - 0 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 4087 4160 . - . ID=g13254.t1.exon2;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 4087 4160 . - 2 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 3242 3339 . - . ID=g13254.t1.exon3;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 3242 3339 . - 0 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 2622 2722 . - . ID=g13254.t1.exon4;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 2622 2722 . - 1 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 2099 2137 . - . ID=g13254.t1.exon5;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 2099 2137 . - 2 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 1606 1781 . - . ID=g13254.t1.exon6;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 1606 1781 . - 2 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 1333 1434 . - . ID=g13254.t1.exon7;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 1333 1434 . - 0 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 911 1053 . - . ID=g13254.t1.exon8;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 911 1053 . - 0 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 530 611 . - . ID=g13254.t1.exon9;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 530 611 . - 1 ID=cds.g13254.t1;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . exon 190 322 . - . ID=g13254.t1.exon10;Parent=g13254.t1 NODE_1973_length_8261_cov_61.4892 . CDS 190 322 . - 0 ID=cds.g13254.t1;Parent=g13254.t1;3_prime_partial=true #PROT g13254.t1 g13254 MFLSDMELSIPALKRILTGTAPSRRRMSHMSLFTTSSVLLACVACAAFLPGAVEGATCLFANETVAVDLTIPTIRFGRANWDASYLNVEVAKILMEEKMGVRVEAVDAFDETQAFVDLEARNLDVYLELWANEQNKQTYIIDRKTVLGIGPLGPIGRIGWFVPHYVVQANEDLDNWRALRYQQNVNMFKDNATLTATNTVSGSDVAKNASSIINGAGCSGTLAACKQAVLDYLAAFNSTTTSNSPGVFYGVPSSWTQYDDQIIRNLKLNFDVRVMEEPTLDTDPGVEEKLITAIRTQYNLQRAIIAYFWTPHQIHHASSGIKLARVQLPEWTQACQDSADSGNYTCDYKFDILTKIAGSHLPGISPDVLQFVKQFQYSTE # PASA_UPDATE: g11161.t1, single gene model update, valid-1, status:[pasa:asmbl_7970,status:12], valid-1 NODE_5274_length_934_cov_247.788 . gene 67 934 . + . ID=g11161;Name=g11161.t1 NODE_5274_length_934_cov_247.788 . mRNA 67 934 . + . ID=g11161.t1;Parent=g11161;Name=g11161.t1 NODE_5274_length_934_cov_247.788 . five_prime_UTR 67 68 . + . ID=g11161.t1.utr5p1;Parent=g11161.t1 NODE_5274_length_934_cov_247.788 . exon 67 934 . + . ID=g11161.t1.exon1;Parent=g11161.t1 NODE_5274_length_934_cov_247.788 . CDS 69 934 . + 0 ID=cds.g11161.t1;Parent=g11161.t1;5_prime_partial=true;3_prime_partial=true #PROT g11161.t1 g11161 PTSSQHIDRDPRLSSTTTDTFSAPYPMERLMEKRNDLLLHTTRTYTTPTTYTTNSRYVVPPSMRHVLLEQFHDQPLGAHLGTTKTLAKVSVRFYWPNMSATVADYIASCTPCQQRKANNKARAGLTVSPQLHGPFENVHLDACGPFQETTLLGNKYVIVMVDSFTGYVEAIPCKEVNHATVAQAILRFCLRHGPPLRIVTDNASPNVHDVVKQVLAALKVEHVLTTPYHPEANAPVERFMRTLKTSESTLLSHIRTDWDVLLPYIVFAYNTAPHETTGYSPFFLAHGR # ORIGINAL: g5853.t1 original gene structure, not modified by PASA NODE_1637_length_10072_cov_36.531 AUGUSTUS gene 7207 8115 . - . ID=g5853;Name=g5853.t1 NODE_1637_length_10072_cov_36.531 AUGUSTUS mRNA 7207 8115 . - . ID=g5853.t1;Parent=g5853;Name=g5853.t1 NODE_1637_length_10072_cov_36.531 AUGUSTUS exon 7207 8115 . - . ID=g5853.t1.exon1;Parent=g5853.t1 NODE_1637_length_10072_cov_36.531 AUGUSTUS CDS 7207 8115 . - 0 ID=cds.g5853.t1;Parent=g5853.t1 #PROT g5853.t1 g5853 MVCESQGAAKPAAPHPKWVGGYEIGARIGEGPMHAAKCPSISRKLSCKLVCKERQGFFMLNEARVISRLNSVTHPNIAKVLDVAQNDSGTLLVLEGLGIDLHTLLRQAGRFSEEQARSLFGQIASGVERCHAMNVVLRDIKLSKIYTSSASRGTVKIADLDRSCVLDTPDQPMLDAHGSPAYVAPEMLTRAPYSGQSADLWSLGVILHTMLTGAYPFNDTTPAGLFTKIKTCDYAIPATVSPAAAALIARLLSPNPQSRGTARDLVRHPWLCMPLPVRLSSCATSEQDDQCVPDVIMQHASA* # PASA_UPDATE: g5851.t1, single gene model update, valid-1, status:[pasa:asmbl_2213,status:12], valid-1 NODE_1637_length_10072_cov_36.531 . gene 89 2832 . - . ID=g5851;Name=g5851.t1 NODE_1637_length_10072_cov_36.531 . mRNA 89 2832 . - . ID=g5851.t1;Parent=g5851;Name=g5851.t1 NODE_1637_length_10072_cov_36.531 . exon 2725 2832 . - . ID=g5851.t1.exon1;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . CDS 2725 2832 . - 0 ID=cds.g5851.t1;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . exon 2344 2524 . - . ID=g5851.t1.exon2;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . CDS 2344 2524 . - 0 ID=cds.g5851.t1;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . exon 1942 2169 . - . ID=g5851.t1.exon3;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . CDS 1942 2169 . - 2 ID=cds.g5851.t1;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . exon 89 1392 . - . ID=g5851.t1.exon4;Parent=g5851.t1 NODE_1637_length_10072_cov_36.531 . CDS 89 1392 . - 2 ID=cds.g5851.t1;Parent=g5851.t1;3_prime_partial=true #PROT g5851.t1 g5851 MADKKHQKAILAELEKKIQRANKQRNDLFKFSYPQKDLAFVGVVKISLFDGTHEKASKSVQLSSATKTSEVMLQMIEKFQLTHREYSIFEVKADGSGERLIQSHEYPLFIELEAAANNTVPTAQLRLRYDAAKRSLGGAAGFDEDKEETKRMSALVQERTLMDAIFFAELVKDIEGVQNLVDSQAIMARGLRELVQYCSRAQGPADVPIPQELSDDMIKATSTTVAIAKDLLDKLAAILGTSGPPHDKCLGTVTDLLRASLRNVAAVVKKVLTQQPIVEGETTRTMSAAEKVYKECVSAVRGAMVIPKATNHASSRIYSRDARGANNDYAPCILLEFTSRSIQELLKISLIGVKDEYMHAATAIVKSCERIHYAIDKSTAYIVQKGGDRSAVDVPRDALVTATEKLVTATKVASGFWPPENAGVDLVFAGYNLARAAADLVIASRGWGVFRLVDEFDAEPFAKLLYSAPDAVEDVQGASANQATTPAGVEQVRVVTSADIADYNINSAIATTILSHRETVNKSAAQLIALTKEKKALEYPAVHKFVVVLALQVMEDITAVERARLDFKLDNALREETQALGRVLKEDFDRRCKMATGVWPPEESHAQ # PASA_UPDATE: g5852.t1, single gene model update, valid-1, status:[pasa:asmbl_2214,status:12],[pasa:asmbl_2215,status:12], valid-1 NODE_1637_length_10072_cov_36.531 . gene 3757 6759 . + . ID=g5852;Name=g5852.t1 NODE_1637_length_10072_cov_36.531 . mRNA 3757 6759 . + . ID=g5852.t1;Parent=g5852;Name=g5852.t1 NODE_1637_length_10072_cov_36.531 . five_prime_UTR 3757 4061 . + . ID=g5852.t1.utr5p1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . exon 3757 4162 . + . ID=g5852.t1.exon1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . CDS 4062 4162 . + 0 ID=cds.g5852.t1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . exon 5254 5386 . + . ID=g5852.t1.exon2;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . CDS 5254 5386 . + 1 ID=cds.g5852.t1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . exon 5587 5702 . + . ID=g5852.t1.exon3;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . CDS 5587 5702 . + 0 ID=cds.g5852.t1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . exon 6004 6759 . + . ID=g5852.t1.exon4;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . CDS 6004 6160 . + 1 ID=cds.g5852.t1;Parent=g5852.t1 NODE_1637_length_10072_cov_36.531 . three_prime_UTR 6161 6759 . + . ID=g5852.t1.utr3p1;Parent=g5852.t1 #PROT g5852.t1 g5852 MADESKPMETFNIVVIGEGGVGKSAVTLKFMRNQGLWGDKFMRNGEGFLIVYAITSRQSFEKVEPLVQQLLRVKDTPKVPIVVIGNKSDLGSDREVPKDEAERKCKSLSIDAFLETSAKEGANIEGAFTELVRAMRKHRLSQGVKVGGRKGGDDDESTPKKEGCCVVM* # ORIGINAL: g3547.t1 original gene structure, not modified by PASA NODE_1904_length_8641_cov_41.5039 AUGUSTUS gene 46 230 . + . ID=g3547;Name=g3547.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS mRNA 46 230 . + . ID=g3547.t1;Parent=g3547;Name=g3547.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS exon 46 230 . + . ID=g3547.t1.exon1;Parent=g3547.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS CDS 46 230 . + 2 ID=cds.g3547.t1;Parent=g3547.t1 #PROT g3547.t1 g3547 ARRLVGTSGGRLWTRVRRWVLVLPCAWALLAWRSTTAIRCSSARATRQRAASRLASVSSFF # PASA_UPDATE: g3548.t1, single gene model update, valid-1, status:[pasa:asmbl_2975,status:3], valid-1 NODE_1904_length_8641_cov_41.5039 . gene 737 4800 . + . ID=g3548;Name=g3548.t1 NODE_1904_length_8641_cov_41.5039 . mRNA 737 4800 . + . ID=g3548.t1;Parent=g3548;Name=g3548.t1 NODE_1904_length_8641_cov_41.5039 . five_prime_UTR 737 885 . + . ID=g3548.t1.utr5p1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . exon 737 1077 . + . ID=g3548.t1.exon1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . CDS 886 1077 . + 0 ID=cds.g3548.t1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . exon 1269 1366 . + . ID=g3548.t1.exon2;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . CDS 1269 1366 . + 0 ID=cds.g3548.t1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . exon 1749 2291 . + . ID=g3548.t1.exon3;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . CDS 1749 2291 . + 1 ID=cds.g3548.t1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . exon 2479 3690 . + . ID=g3548.t1.exon4;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . CDS 2479 3690 . + 1 ID=cds.g3548.t1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . exon 4059 4800 . + . ID=g3548.t1.exon5;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . CDS 4059 4680 . + 1 ID=cds.g3548.t1;Parent=g3548.t1 NODE_1904_length_8641_cov_41.5039 . three_prime_UTR 4681 4800 . + . ID=g3548.t1.utr3p1;Parent=g3548.t1 #PROT g3548.t1 g3548 MEDQEQGSMESVQGGPHAPHVPTDASHGGPSSVAAAAELGHFGVWFAGNVASSAVKWAQWGTEQGFAWGRTAVEASGRFAETAILTVAAAAAGAVEGHGVNVPGDVPMSDADDSVYGPHDHSADGRMDTSEPTPNAGPDPQQGSRAPAGSESPGLTARFLDAVPRVLSGLEYGREAVIRSLHATERLTAFGIELADRAVSHSLTATDHVIEHAAGSRALGEALHRMGVRLPHETLGALASVSNVVREFAGTGHGGVSVGPIDSALGVAAIAAVQAETRVPVATWLRLQGSTPASRAELARLSHYMRFASAAYGHNAMRFMGYKIPAGAASLSAQAESTAERTARHADPAEASVGGGANERTPSTTLAAATDNAARGESGETVNVIEIVSSEQLQTALVDAADADDGDAGDVTDRSAASGAQPPLWSTQPTATDSMQRGGWGESAQPEQSGRARASTHHVLHHGAISHHTRVAEGDIRASEWGGSLFRPVHYVAFDRSVNAVVVTLRGTMCAEDILTDLVCKPVPYYSRRGIVALERRDSQQGTAEIRSREDANASATADADLERQRQTVEGGGQQGGQLGAPIGLVHGGFLRAAHRMDALLRPTMLDLLAEHPGSRVVVVGHSLGAGVSALLALLWADGGLPAHADVTCMAYATPCVASAELSRVLRQRVWSVVLEDDFVSRLSLGSACDLRKAVASVVAESGLAWRIIRAAATRSVARMRRASRQSEGLDFEPETRVEHEGEGEGVQGESREHRDAEAEARDATPEFFASVRNTLRADMQHDKLYPPGRVFWMRRLAAGTAERTDADRAAVAEFMRREESLRGSAASSAAASASASHVMAVVDCEQFGELPLTGRVLLDHMPLAYEEAIDSCVAAAEAYVDGERGTA* # ORIGINAL: g3549.t1 original gene structure, not modified by PASA NODE_1904_length_8641_cov_41.5039 AUGUSTUS gene 5432 6409 . + . ID=g3549;Name=g3549.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS mRNA 5432 6409 . + . ID=g3549.t1;Parent=g3549;Name=g3549.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS exon 5432 6409 . + . ID=g3549.t1.exon1;Parent=g3549.t1 NODE_1904_length_8641_cov_41.5039 AUGUSTUS CDS 5432 6409 . + 0 ID=cds.g3549.t1;Parent=g3549.t1 #PROT g3549.t1 g3549 MLPPGRLHRILRAVVWHAIVSDATARGMMCRGMCVRYISATSRHTAACSSTPPPSPTSSLLDQRGQSPRIDGLHLIPDFLSAEEQSAAVSELCAHIARTTPSASPAGGRRIYNLHGESDIQRTLPYVSWLLARVVSADGSLGLPAMRPPNALQLNDYDPDGGCQLHVDARSIGDTICMFSLMSPCIMTLAPESAVAEAAEAVHREHRERRARESSAGTAASVDPAASIEADVFSRITPSARQIRLDGGSLLVLAGEARREWAHGIARGRSHVDGAGERVVRARRLSLVFWRTLNATAGGWSVRRSSNSALRMTDPSTLPPARRIL* # PASA_UPDATE: g274.t1, single gene model update, valid-1, status:[pasa:asmbl_141,status:3], valid-1 NODE_1038_length_14501_cov_41.007 . gene 8314 11677 . - . ID=g274;Name=g274.t1 NODE_1038_length_14501_cov_41.007 . mRNA 8314 11677 . - . ID=g274.t1;Parent=g274;Name=g274.t1 NODE_1038_length_14501_cov_41.007 . five_prime_UTR 11581 11677 . - . ID=g274.t1.utr5p1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . exon 10435 11677 . - . ID=g274.t1.exon1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . CDS 10435 11580 . - 0 ID=cds.g274.t1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . exon 9960 10040 . - . ID=g274.t1.exon2;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . CDS 9960 10040 . - 0 ID=cds.g274.t1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . exon 9343 9424 . - . ID=g274.t1.exon3;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . CDS 9343 9424 . - 0 ID=cds.g274.t1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . exon 8314 9199 . - . ID=g274.t1.exon4;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . CDS 8655 9199 . - 2 ID=cds.g274.t1;Parent=g274.t1 NODE_1038_length_14501_cov_41.007 . three_prime_UTR 8314 8654 . - . ID=g274.t1.utr3p1;Parent=g274.t1 #PROT g274.t1 g274 MAHRVDLFGAAELKPVVRRCNSEGEDDNALLLTPGIYIANGLSIRRQNARRRSRRAGILIGLAAMAVALFVGGYVVGFTLGPLGSSPKSSPSGAAQSAPQGIKFADAYIPVVPLPAAFTRGNATLAVTSAPAFRFEFPAVAPSRILIAAAERYNGIIFDHTSSQMPHAKDGALNSLVVECADLSDAQTLETDESYSLDIPADGSPAKLTATTVFGVLRGLETFSQLVHYNYESAQYEIVGAPWSIQDAPRFKYRGLLIDTSRHFLPIRHIFNLVDALSFAKFNVLHWHIIDDPSFPVETPSRPKLWAGAYSAYERYTIDDVRAVVEYARMRGVMVMPEVDFPGHTRGFCAGYPELCTHSTLSACQQWNTPGLDPSVPGSFEALEAVVDDFVGGANSTFNFEYLHLGGDEVGLDCWNQEPHIAAWLKTMNFTDASDAYLYSVLLAQKAALKNGVTPVHWEEVFLHFGDTGKLDPSTIIHVWLDHNTLAKVVAAGYHGILSDSQHWYLDALDVTWQKMYANEPLDEISDPAQQALVVGGEACMWGETVDAGDLMATTWPRAAAVAERLWSPREVTDVDAAAPRMSTFRCIMNKRGYVAAPSVDAHARDAPPGPGGCYVQ* # ORIGINAL: g273.t1 original gene structure, not modified by PASA NODE_1038_length_14501_cov_41.007 AUGUSTUS gene 5566 7373 . + . ID=g273;Name=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS mRNA 5566 7373 . + . ID=g273.t1;Parent=g273;Name=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 5566 5621 . + . ID=g273.t1.exon1;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 5566 5621 . + 0 ID=cds.g273.t1;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 5929 6127 . + . ID=g273.t1.exon2;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 5929 6127 . + 1 ID=cds.g273.t1;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 6556 6727 . + . ID=g273.t1.exon3;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 6556 6727 . + 0 ID=cds.g273.t1;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 7186 7373 . + . ID=g273.t1.exon4;Parent=g273.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 7186 7373 . + 2 ID=cds.g273.t1;Parent=g273.t1 #PROT g273.t1 g273 MPRTDSGTEPPAVPRRRRRAAAPSYTFGGKVDLVCLGTGDLSGGISHVLKGAGDGSVLCKTVGDDASTFLTCGGRYVLSSPKEGDVAFSEDEQGENIVGTSALSYDGPAAEDVSGAGYKSAVASTDSIICRVAVQPMFIQVKADSKNVCEKSAYGSNDGANSPRALDCKVTVTGVSVVSELSDTADAGAKVACLISSLPANTAA* # PASA_UPDATE: g271.t1, single gene model update, valid-1, status:[pasa:asmbl_142,status:12], valid-1 NODE_1038_length_14501_cov_41.007 . gene 312 2752 . + . ID=g271;Name=g271.t1 NODE_1038_length_14501_cov_41.007 . mRNA 312 2752 . + . ID=g271.t1;Parent=g271;Name=g271.t1 NODE_1038_length_14501_cov_41.007 . five_prime_UTR 312 312 . + . ID=g271.t1.utr5p1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . exon 312 441 . + . ID=g271.t1.exon1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . CDS 313 441 . + 0 ID=cds.g271.t1;Parent=g271.t1;5_prime_partial=true NODE_1038_length_14501_cov_41.007 . exon 636 870 . + . ID=g271.t1.exon2;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . CDS 636 870 . + 0 ID=cds.g271.t1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . exon 991 1419 . + . ID=g271.t1.exon3;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . CDS 991 1419 . + 2 ID=cds.g271.t1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . exon 1718 1826 . + . ID=g271.t1.exon4;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . CDS 1718 1826 . + 2 ID=cds.g271.t1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . exon 2085 2752 . + . ID=g271.t1.exon5;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . CDS 2085 2736 . + 1 ID=cds.g271.t1;Parent=g271.t1 NODE_1038_length_14501_cov_41.007 . three_prime_UTR 2737 2752 . + . ID=g271.t1.utr3p1;Parent=g271.t1 #PROT g271.t1 g271 GGAGTEFYRKRWNSIRIMYLTTFLTSIAFSILMTSLWPFLEKELGGTESFLGMVVGAYSLGQTIGSPIFGYWSNARPYREPLIVSTVINGLGNVMYCFSKWPAHHNTWFLLVARFIVGFSGGNVAVSRAYVSGATTLAERTHTMAMLSACQATGFIVGPLFGAAFSALHPGLQYRYFEFDLYTAPAYLSAVLAIVQLVLIILYFHEFQLDESGAPVDRYALRKTKLEAEARSRARARSSSLPKSASVDELTGEDGLDDGDVEKDGDACVDPASKFKIDYATCAGCIVMFFMIIFVFALYETIGTPLAMKEYGWSDTKADFYMGITFGVAGAISVVVFICIRPLTERYGEQQLFTGGLVLIFIGFLIYLPWGPPSYTDPTGCTLSWCASTPQLPIYQFFIGCVFVAIGYPACTVLVYIMYSKIVGPGPQGTSMGIISMAGSGARLVGPVYITNIFRYQGPRVAFASVAGMIFVTLFVTIFSYRRLHYPGVRMGTKKEALLRPNAAQTIAATGESVPAH* # ORIGINAL: g275.t1 original gene structure, not modified by PASA NODE_1038_length_14501_cov_41.007 AUGUSTUS gene 12176 14501 . - . ID=g275;Name=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS mRNA 12176 14501 . - . ID=g275.t1;Parent=g275;Name=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 14379 14501 . - . ID=g275.t1.exon1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 14379 14501 . - 2 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 14217 14269 . - . ID=g275.t1.exon2;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 14217 14269 . - 2 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 13994 14069 . - . ID=g275.t1.exon3;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 13994 14069 . - 0 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 13444 13643 . - . ID=g275.t1.exon4;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 13444 13643 . - 2 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 12840 13068 . - . ID=g275.t1.exon5;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 12840 13068 . - 0 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 12528 12719 . - . ID=g275.t1.exon6;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 12528 12719 . - 2 ID=cds.g275.t1;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS exon 12176 12315 . - . ID=g275.t1.exon7;Parent=g275.t1 NODE_1038_length_14501_cov_41.007 AUGUSTUS CDS 12176 12315 . - 2 ID=cds.g275.t1;Parent=g275.t1 #PROT g275.t1 g275 ARKGATIPGLDKGTTLVDAFKKEWVLGEAIGKGGFGEVFLAAPKGIVVGRDAVHVIKAEPVTKNANPMDIETKFYMGPGRKEEVHAYVRSHPGIKHVGIPVYHSFGQHSVGAQKYTFLVIDRLGAPLSALFEQCGERFTPKTINTLALQLLDTLEYIHSKSYTYGDVKGANVMIGAGASQSLAYFVDFGLVDMYRFQSSGHIPYREAPGKGNGTTEYMSIDAHKGASIARRSDIESLGYLLLRWYRGSLPWADVASDKSRVLAMKSELSKAVKPTLASYFPKTKFPEGHPAELEVLFTHVFATQFSDEPNYVNLRAAFSDGLRRRKIKADGKFDWQ* # PASA_UPDATE: g272.t1, single gene model update, valid-1, status:[pasa:asmbl_143,status:3], valid-1 NODE_1038_length_14501_cov_41.007 . gene 3077 4982 . + . ID=g272;Name=g272.t1 NODE_1038_length_14501_cov_41.007 . mRNA 3077 4982 . + . ID=g272.t1;Parent=g272;Name=g272.t1 NODE_1038_length_14501_cov_41.007 . five_prime_UTR 3077 3137 . + . ID=g272.t1.utr5p1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . exon 3077 3230 . + . ID=g272.t1.exon1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . CDS 3138 3230 . + 0 ID=cds.g272.t1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . exon 3380 3503 . + . ID=g272.t1.exon2;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . CDS 3380 3503 . + 0 ID=cds.g272.t1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . exon 4030 4303 . + . ID=g272.t1.exon3;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . CDS 4030 4303 . + 2 ID=cds.g272.t1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . exon 4432 4982 . + . ID=g272.t1.exon4;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . CDS 4432 4741 . + 1 ID=cds.g272.t1;Parent=g272.t1 NODE_1038_length_14501_cov_41.007 . three_prime_UTR 4742 4982 . + . ID=g272.t1.utr3p1;Parent=g272.t1 #PROT g272.t1 g272 MKIDGAVALITGGTGGIGRAAAVALLQRGAKVLLVDLDPKQGNAAESALKKTYGDDKVAFVACDVADKDSLEDSFSRAFTRFGRLDIVLNNAGVGELSGDRWTTVVDVNLTAVIRGTALALEAMERTKTAGVVVNTASMGGLAPMPFSPIYCGTKHGVIGYTRSVAQALHGMRSPIRANVICPSFTDTALVRDGMAVNSVFKAVVESLGPLIDPSLVATGIVQLIEDDTKNGAVMRVTGQNGIDYQQYGGMAKRSAAAAEKPGSKL* # ORIGINAL: g11146.t1 original gene structure, not modified by PASA NODE_3792_length_2753_cov_41.8103 AUGUSTUS gene 270 2621 . - . ID=g11146;Name=g11146.t1 NODE_3792_length_2753_cov_41.8103 AUGUSTUS mRNA 270 2621 . - . ID=g11146.t1;Parent=g11146;Name=g11146.t1 NODE_3792_length_2753_cov_41.8103 AUGUSTUS exon 1586 2621 . - . ID=g11146.t1.exon1;Parent=g11146.t1 NODE_3792_length_2753_cov_41.8103 AUGUSTUS CDS 1586 2621 . - 0 ID=cds.g11146.t1;Parent=g11146.t1 NODE_3792_length_2753_cov_41.8103 AUGUSTUS exon 270 1173 . - . ID=g11146.t1.exon2;Parent=g11146.t1 NODE_3792_length_2753_cov_41.8103 AUGUSTUS CDS 270 1173 . - 2 ID=cds.g11146.t1;Parent=g11146.t1 #PROT g11146.t1 g11146 MVDGTLTVLDSYFDGTNATRGGAINMSKGTFIMRRCTMQRGSATSGGGLLYFDAGFSRGLIATIEDSLLAESVSTEFGGCVRLKRFASLTVRRTTFQQCSTMESGGAICAPDLSGVYIWNSVFLNCAAGKSGGAISVTDSAVLMATDTEFDRCRAMTMHGASIFIGTSTLGSSRVLRCTFTGGYAPTGAGGAITVMLDRSLVSSYDCVGRDIPTILDEDPGWTVVDACTFSGNGAQLGGALAVLEGGKVIVKSTNASDNSAPYGGFMFCDFATSASVSTTSVQRCSASSSGGGFMLRDGAQVGVNDSVIVGCRSLGSGGAVLAQVGAVYTSVRTLYTNNSALEAGGVISLEGDASAWFQSDQMHRNIASNNGGAIACKARSNFEATNVLISDNSAQSGGGVIVGGAANATFNDCRVSKNLANTGGGILVTSLGSARFNDGAVTYNQAKFGGGGVIVNEDGYLYAAGTSFSFNSGGLEGGAIAIQGRATVAISSLTIDSNTADAGGGISADGRADASVFRDDPGVAGGRVSFDMSVVNVTLSGNVAKSGNGGSAALLGGFTRVIGGSFAGSVAAVNGGGLYYKGGAGVGSGSVDGRPSSTLDVTGCAFSNNSAVADGGGLYLSQEGQNTPVALYDCMVSGNTAYFGG # PASA_UPDATE: g4981.t1, single gene model update, valid-1, status:[pasa:asmbl_5319,status:12], valid-1 NODE_2969_length_4627_cov_35.3051 . gene 82 4186 . - . ID=g4981;Name=g4981.t1 NODE_2969_length_4627_cov_35.3051 . mRNA 82 4186 . - . ID=g4981.t1;Parent=g4981;Name=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 4036 4186 . - . ID=g4981.t1.exon1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 4036 4186 . - 0 ID=cds.g4981.t1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 3592 3750 . - . ID=g4981.t1.exon2;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 3592 3750 . - 2 ID=cds.g4981.t1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 2728 3379 . - . ID=g4981.t1.exon3;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 2728 3379 . - 2 ID=cds.g4981.t1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 2263 2417 . - . ID=g4981.t1.exon4;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 2263 2417 . - 1 ID=cds.g4981.t1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 1016 1859 . - . ID=g4981.t1.exon5;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 1016 1859 . - 2 ID=cds.g4981.t1;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . exon 82 760 . - . ID=g4981.t1.exon6;Parent=g4981.t1 NODE_2969_length_4627_cov_35.3051 . CDS 82 760 . - 1 ID=cds.g4981.t1;Parent=g4981.t1;3_prime_partial=true #PROT g4981.t1 g4981 MRLVSLTGNVAQTGGAVLAINSDISISGSDFVLNRAIDYGDSDAFSVNRLGYLWDTFGSFTAINMTALEYSNNGILGAEGCGGALTILSTLRSTVVVENSTFNENRAISQGGAVLVACQECDLRVIVKGSFFKGNVVFGSFGRLVYSNIVNVTSATTANSTTPSIRLLLPPMGGACAFYGGRSTIPVGSRDMTGLVVDFVNTVFSRNNANVNGTNDFLSATEAILRAQQLHAQNIPVTYGGAIGCDSQLPCTAAPNVLIGTTLCAGRSMGIQLRMVGCTMKTNAADAGGGLYLSGGTATIESTVAANNSALMQGGAFSGYVAPNFVLTNVTCANNSAGMSGGCIHVGDLLLATTNQSATLTVDGSEFTGEVIRNLVGGFWALIQHASLQTSVTTPPSGGGAIYFGSVGHSTISTSFFAWNSAIDGAGGAYAAATIAGNVDIMEAPAVVTVMSSCIFNENNALKLDSRQTWAGMGGALAFNFTAKAGASIVDCIFSDSVAVKGGALGALFSQGATHVTSLRMERCSFYRNAAFTTGASLSLEEEAIGDTVSEYTDGSEPTLAVGAPFVPSDMVSTLRRAEAAGNLTLLSGERIPMEGIGTGRPRAVIMDCNSIVGGFRDTFWTTEGGVMYVTGIAVWIERSVFSKNAAATYGGTMSLRRGALLVVSGSSFLISGCETYGGVAFVTTSVLAVYDCDFFNSFSGLTGGVFHLELPGYIFSEDSRYNVQESIMFGGLLAVEGVRSRSSTYAVFTGGHILAGTAGEMGGVFWLNIKTRLVSLEMYHRLTGKSTPSNESVANVNGDVLLRNVSVEGAYAMSGSVAALTMFSSLSMQNCSMVKNGQENTMFGGVVVVTSGGNFEAFNTEFRDNMATNGGAISVAGEA # ORIGINAL: g10518.t1 original gene structure, not modified by PASA NODE_267_length_28663_cov_40.5916 AUGUSTUS gene 374 2877 . + . ID=g10518;Name=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS mRNA 374 2877 . + . ID=g10518.t1;Parent=g10518;Name=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 374 952 . + . ID=g10518.t1.exon1;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 374 952 . + 0 ID=cds.g10518.t1;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 1284 1397 . + . ID=g10518.t1.exon2;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 1284 1397 . + 0 ID=cds.g10518.t1;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 1788 1942 . + . ID=g10518.t1.exon3;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 1788 1942 . + 0 ID=cds.g10518.t1;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 2276 2543 . + . ID=g10518.t1.exon4;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 2276 2543 . + 1 ID=cds.g10518.t1;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 2857 2877 . + . ID=g10518.t1.exon5;Parent=g10518.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 2857 2877 . + 0 ID=cds.g10518.t1;Parent=g10518.t1 #PROT g10518.t1 g10518 VKSLIKAESDPQRLQQLDIRQRALKLTANSMYGCLGFGHSRFYAKHLAELITLRGRDTLQKTVDLAQGALALNVIYGDTDSVMIATNSEDLAEAKRVGVALKKEVNKLYRHLEIELDGIFRTMLLLKKKKYAALVVSEVDGNIVTHKETKGLDIVRRDWCELSHDVGNYILNQILSETARENLVSNIHAYLRQVAEDVMGGRTPLDKFIINKGLTKSPEDYADKKSQPHVQVALKLKAKGRSVRPGDTVPYVICEGDDPSFAMRAHHPDDIVRSPDTLKVDFKYYLRQQVHPVVGRLCEPIEGTDAAHLAECLGLDPRAYAHAIAAAEDAQGDQGDLPAEERYRSADRWSVSCVSCGWYGEFPGVVRTENKKLLMPSL* # ORIGINAL: g10519.t1 original gene structure, not modified by PASA NODE_267_length_28663_cov_40.5916 AUGUSTUS gene 3039 15965 . - . ID=g10519;Name=g10519.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS mRNA 3039 15965 . - . ID=g10519.t1;Parent=g10519;Name=g10519.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 3039 15965 . - . ID=g10519.t1.exon1;Parent=g10519.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 3039 15965 . - 0 ID=cds.g10519.t1;Parent=g10519.t1 #PROT g10519.t1 g10519 MGVSLRGAALLALVLGVVLSPNAADATPAVKGETVHAALLLDKTESTNVCDAIRCIASSPPSTMDELNGPVMQDMAWAAAQCDSSQDSGVIDFDSGWEALQPDALTINHLRKTSYSVTNAKRKRSLQGAIGKDGFPYVTVTVTVVADVSGTAGSVPFGAHITATINAHAAGVPSSMSGHALFPWTGVLVTNANSNAILADADLFDGNPPYFIVGVSLDATPTDIVSVLAVTADYLYRIRAVMDGVRAVPSGLASTIRGAFLDHSAFPAVSAAHITEGRLWNPDNGSLTRGWMMAQSSSTPDEAEVHAIVDAIEVMATEVSRGLCEHVRAVNGSVRHSISGALFLAGDRVRRLSLSAFTSAVVQCWRDDKVIGILAVQLAASHDPTSAAVTWPVSVFVEDERAAVAITKGARLRYGGKLAGYVLCTIGGITRPFTALKTDIFGDDGVGMLHPDVSLGSVAPVKALLSSATQFLQQGNQLLDTATASLLSVNRVDEIFAEYRATHALPTLLSFLSFMFPKVVTGAANLRLRLGGASLDRSLSGHVSVTIDALVSARLESKEWSDVSWLSSLINGALSTAYARVAGVPALKKMARPVIDEKVTISDAYIKASLGGSLNATFAVDGSMVQLSEASQIDAQVMASATVKFTASGSLSPIFRAATFTWDMKNNETTSVLQSSVDAAEAIGQQLISTVDDLVSGDGPLHFENALAAVEHYISSNIPWAGKELSPTSLKAGTIGGFSIVDFWKELAQFVSGGTVAAADVYRALAAFCRVVEKSHPLVTLRPLISSAKGGSVRIGIRSSELQRFTVDEKGWNMLATSRFRGSVGVWTDAALTLSGNGLEAAHIHVKASADIAGFTCPFRLDMMEGVVVDGNMHAAIDMDSAGKASATLDVAARVILRQMDGTWPWLYFSVSGLSLHVNTDATMDEASAEGPRVEIKTSADFRQSYAMLLSMIKEVVVGAASKLHTGALGGPLPPMSASTAADLQAAFADASEKRIVPWLYELTDEALSAAIAFKSDVSTDALTFPMSIKATVNGRASIVCTVPVPTDKTIQALLVSFKTALDECKLSAFVEVRTSNLNEDKPNSGDIGLYPTISGQVWRMELDVSDGGLFKGIAPFSLSIRPSFTGWWDLAHAASAVLERESGGRVKLSLDYADASAVVPTELQAVYSAKLPLITLNLTASAHFSATISQDALSSIKTSGSPFRTELSLKGSKMVAADFGWSASCGVGSWMGLPTPAQLQWSTNMDGDRLCLDSPVPAENNTFDIDLTIQVRQASSAGIGFDVSDGSVRRTVTLPVGVPSSDALKAAFADLLPDAWRPMLTYKIVPADDLHDRAEQLSFVLRRFEVTPGTWVIPQGIAITRNKFPGLAPAMSQVPRYTNSLLLTHMSLSTGAHAVALADSASGVLGVLDVTAKTVKAVGQTTASIVLRSPTKPNAFLSALTSADRITDMADITWSLKTNVSVSSLDFGAVGLEIPILEGISVQLNAFLTSENFTSSALASAIVNWKASMSHPFDSIRNAYEQLASLNSLCGWLRAIESVPLAVSKSAPASLPLPFLTKSIAWVSHDTVGAKLTDIRTRVCSKGESLTVAVLCSILDSEFGSGTCKAVRLRALSLDLDLAVSISKAYGDDFALDMPKMFPNSGIPVGIGSSGGVAISVGVDAELRVSADWTLGEAPTIRLGKETHLTITCTADTHGAAKVTIGPISANFANLAAQLGIGEPVRLQVTVNGDGVPAVGISGKGRLSGSLNALGEYVCDLNIGVDLARIGDGSAWDIEDACDPSFEVAWERVLAKFESSIMTYYADAVMVVDHLGDGIEGLVGALGPILEKSVIPFVSDLLMNLVPGHLRSMVGPEIRRGFTIALTALTDELKLTSGKRTEGETMRLILSGLTKIMCDLLKPDACPSVPDADADELLWPMNWTTTLRPPVQSLSFDVGGGKVAQLDAQCDLDVKADFKIAFTIVHEKRGGITIRFDNGPAVKTDIEIGTPHGCMLEGRIGPIAAVLEADKISGVKASFKAAKVDGEWKPHFEADATLKGSLNIGLVGKDADSMDAVKESVQALPHFQSTLTIGWSTSLDNPAPTAPGIHFTGMQMCIGSLLQMLKSLSKPLNMVLGPVKDVIGKDKLLMRKLGDVSIMVFGRSMSILEFVVYSAETLCEGGCQYDGALEAADAIMSTFGFMDKLANFGTMANGCAAFTDVASFSIDPGNTDDIEPTITGDAPDFSVNVDGVEAEHTGFVTDAWSSLTESTSGVRLLLNKASAPKAITSLIAGKPFELVEVRFDPLVVDIGTLSWEIIVYSPPMVWVGVTLSASVRLDFPVIFMDTRGLITAFESGNLADLTGGLGIKIKKDDGSPYTPFTASVIVAGYAGVGFNIGPIKVGGEIQVGLHLTASIAFVSPDGDSVMYFDTITHIFLRNPQKALKLSMRIDADIELRLRACVKLWRWTKCWDFLKKDYHVPIWALQTADPTAPSQVVHDDGSYNADFTQRSVDGGNDGPWIVQILEGGVMGVRNAMASRALSPIEGRANPSKGIVRARGTPSGPHILDVRGTPAVAGIEVHPLAALEYTIGCGKETAVNVRLTRETLNTDVAREGASGASFQFRSATVESPACMGLRVMKPRPGMSYTSTGLPCAAVIETDANSAVRIGGQPVDYAGAVVLTNGTRALDVISLAVRYELNEGTVLGDGGKVRVEMRVPHLVNNITVATAPDQPGTLIINNVPRPRSATAQGGKEHDKFVVPNMRDLRGHTRLDGGGNRNEVQVTSVTPVGGMTTTLSIGTVVTVTNEDTTAFTYKHILDFVLNVIGRRGERTTTRLLGADSDAWVRVRGIADSSDMDYNITACDPSAYYNVQMEGAGVHTLHLGSNGVFNGLQCTVAATCGVEGSPICQIMVHAYAETQPIRVILHNNKAVFYNIEDSRQFLTLFHSGFTRMALVLTREQGVKTQVASILPTPHLEIHADFSDGDGSNNVVTVCKSHGAILATGSFRAVLGPSNSDIPCNIPVDDKAASGDADPMDSNPLVDVRGTFVAVNTRQDVPISIGMDSFRNGGQGFILSAHSLDPVLPDGTRPATRPPPNPPSQWMCGLMRARGAPEGLCGDGSPAATVLYVGRVHMAITTGAGDDSVFAAHLLPSLQFSLSTNDGKDTLCVADSGAVINADTGRDPDTLLLVAPVGPTTVRLDPDTGDDAEDDVEVWIGDNRAGFADNTIAPLGDAASGHFLRLLGYHMNDQTVLRRGTPPSPQSWGIPGTATARSGLKAVGPDMSGQPLHIRGTPVAIARDANSNIIPVSMSEEGTTVRMNFATGDIIRVDELASGCVLVLNGKSQHGAEGAAQYELRVWLPRMEERGIIQVMSDPGTDGVLDFIVPPSPGDDGTTVYDVGVTRMEPGGYVAVQVGTNIIKGQFSHVRVRANHTALVRIDHPFATPDFVVEAVGDSHVQVEMVSIMSDVLLSNASTTISSVTIGALLQNGFGFALAGGQTQVSIDGTGAGQDTAVLDDDCMDISSSIKSPASKGKTRVPPTNWFTSMATGLGLRNETFHRCQFALHSTGVIAVRTRKLTARNIDAVRNVREIQTDALIIDISETLVLWESLVVAMANVTVNGRFHISAPEATSLSITAPIEAHIPVDITCGGNIHDGDALTMTIATFGDDPSQSSTVSARAGKCDVLIVVADDRPNPRVRMHDAFIDSLVVRMQAKHAQIGVHEPPDNGRARNVTVSSGFLSVLHPDGTSGLWLAWGGTPPTLPSLQFVDGNHDVLTLADAKSAVPVHLTADVTGFALVVSHETGIGFTETQLRTDAQKRLFVAAPSSADVCFDVDDMLSPGFWLASSSMSAVVCRSKPALDRCVRKQIATLSIAPKSPATAFSSSDNDSHVVMLFGSLAQPKAVGEYDSFVDNVVPIMIATCAIGIFVAAFTGRFLAHAWIGLQFSAALGRAAMQATSETPAVAIAIAVQRVVLNFLSPWYCGGDAATESSARTLANALQKAAICLACVVVLLALVGLARSRMSGRSIRLFAWLSFGERMTVPAYLFFVMAAQIAHMSREAWDGLFVASVISTAILVVAMVYHSHTDMRAPTKEDQDDDDDDDAAPHLLASNTPHHRKSAGFAPQRASEFLSRAVDAKRGWMQSSHTATQAVVAILICVVSHVDLTEHRNISQKGAFAASIVLFAIASIATCADGVLRQVRIVENQFSDPTSTEARRALLWRTSIAVASDAAVASLGLVFAVAVYADRGVTTSTLAKAVWLLWMALGIAVTLVPIAYGVVIGLRRQAGYNNMDSAVIDARGRIYREANQTEDYGVDQISEDSDGLPLMTLPPK* # PASA_UPDATE: g10520.t1, single gene model update, valid-1, status:[pasa:asmbl_4784,status:12], valid-1 NODE_267_length_28663_cov_40.5916 . gene 17741 18901 . + . ID=g10520;Name=g10520.t1 NODE_267_length_28663_cov_40.5916 . mRNA 17741 18901 . + . ID=g10520.t1;Parent=g10520;Name=g10520.t1 NODE_267_length_28663_cov_40.5916 . exon 17741 17866 . + . ID=g10520.t1.exon1;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . CDS 17741 17866 . + 0 ID=cds.g10520.t1;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . exon 18237 18405 . + . ID=g10520.t1.exon2;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . CDS 18237 18405 . + 0 ID=cds.g10520.t1;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . exon 18749 18901 . + . ID=g10520.t1.exon3;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . CDS 18749 18777 . + 2 ID=cds.g10520.t1;Parent=g10520.t1 NODE_267_length_28663_cov_40.5916 . three_prime_UTR 18778 18901 . + . ID=g10520.t1.utr3p1;Parent=g10520.t1 #PROT g10520.t1 g10520 MGDNGKIIRSDWLDVESRILRSWKRKWVVLDEHVVRFYEGETGNTTRGKLVDTLPCEAVVKVDGPLTEENILNITGRQRNYKIKCFTRERAEDWKKDITYRANKKDK* # ORIGINAL: g10521.t1 original gene structure, not modified by PASA NODE_267_length_28663_cov_40.5916 AUGUSTUS gene 19360 21655 . - . ID=g10521;Name=g10521.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS mRNA 19360 21655 . - . ID=g10521.t1;Parent=g10521;Name=g10521.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 21152 21655 . - . ID=g10521.t1.exon1;Parent=g10521.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 21152 21655 . - 0 ID=cds.g10521.t1;Parent=g10521.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 19360 20871 . - . ID=g10521.t1.exon2;Parent=g10521.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 19360 20871 . - 0 ID=cds.g10521.t1;Parent=g10521.t1 #PROT g10521.t1 g10521 MGVRGLTSLISREPSLRHPFLWTSPPVVGSECDIAPDHTLHTPRKAVVVDGSSLMHSLYSWCDDTMLGGSFDDYTRVISEFFLALSSVGVQVTVVLDGVVPTEKMPTMLSREDGKVTTCEDTFSRIRLPASTASLGGVAAPVRPVMIMHAFRRALCAAGIEMIVCDYEADEVLVRMALDRKAYVMSQDSDFIIHDLPCGFIPLDSVTWSATGVSGTVVSRTDVALKFNMAPHLMPLFGCLCGNDYVDTAVLSRFHEWVQSSYPQSQRSGQKLLLSVAAFIASFGPAASVDAVLNSLRGLGAVGLERAVTEGVSRYTVCGDVDALGGGASCLLLESPTANVPGEFVREYRRGGVPQCAALLIARQEFICYGQLEDLSKTTSWASGAKLRMRLYALLLGAQCTVTEFVRRGRRTVSEKVALTAQDSSAWWPAVEALDAFTLPVNLERVRALPRKSRLALLCGVAGVDRAVVNSPQFVSASDAAVYAACTLPWVISSGASERDVWASVSRAVVGGGGADSIPGMLMKLGREGTASSVCMRGIHLAAQVQALLVVVEAINWVLGSPLGPLEPCNVFDGALFHAALIPKAGAVFASLGTPDSALLSKAVAVETSRMGSASAMSASASAAAPTVKRGSRGSGASGAGTVRGSSSGGVGRGNVGNRFGVLADDAEGHE* # ORIGINAL: g10523.t1 original gene structure, not modified by PASA NODE_267_length_28663_cov_40.5916 AUGUSTUS gene 26421 27577 . + . ID=g10523;Name=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS mRNA 26421 27577 . + . ID=g10523.t1;Parent=g10523;Name=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 26421 26491 . + . ID=g10523.t1.exon1;Parent=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 26421 26491 . + 0 ID=cds.g10523.t1;Parent=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 26757 27283 . + . ID=g10523.t1.exon2;Parent=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 26757 27283 . + 1 ID=cds.g10523.t1;Parent=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 27531 27577 . + . ID=g10523.t1.exon3;Parent=g10523.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 27531 27577 . + 2 ID=cds.g10523.t1;Parent=g10523.t1 #PROT g10523.t1 g10523 MKFVPSSICSIKQVYGAQYPPLLGSNGLPRPARQSFDEFSLTSSDAWREDNTTLPEEQPNHGGGAPGTPTRTQNAPANASQHTRAASESSGTAVAASPTVSVARLSLAAQPQSQPQPHAPASPVSSSPSVGDGRGAGHNGAPPTHIDLTAASSGSSATSSSRQSSEPSTPQKTAVLAGELKRSSSGLSIGTHHPHPVPLASFLSIALWKFLRHA* # ORIGINAL: g10522.t1 original gene structure, not modified by PASA NODE_267_length_28663_cov_40.5916 AUGUSTUS gene 22288 25047 . + . ID=g10522;Name=g10522.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS mRNA 22288 25047 . + . ID=g10522.t1;Parent=g10522;Name=g10522.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 22288 22617 . + . ID=g10522.t1.exon1;Parent=g10522.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 22288 22617 . + 0 ID=cds.g10522.t1;Parent=g10522.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS exon 23074 25047 . + . ID=g10522.t1.exon2;Parent=g10522.t1 NODE_267_length_28663_cov_40.5916 AUGUSTUS CDS 23074 25047 . + 0 ID=cds.g10522.t1;Parent=g10522.t1 #PROT g10522.t1 g10522 MEHSENGPTSTSPANEDSKAHTECDDDLIEFGAQLRTGVAPVNIVMEGNVSDNNTTDTALGSTVSGVENAIRDKCPVCLDSPGDGKDGSSVRTDTCAHVFCRDCLVEWAKESRTCPLDRIPFALIFLLDASGQDIIGNELPPELPNAHGTDDGAYFGTLGDGDTPCEVCGVSDNETELLLCDACDRGFHCQCLSPRVREIAWDRDWFCPECAREEDCDEFGFSRSSQEEADDAMVLGAADARGPIRHVGIAATRVSVQDGLRARRSGRIRSERRRRRADRAVRAERQGAMLTHLLAAHRDAVVTGRSRGDNDRRLEAVRSEILALRRNRERVFGSVSFLPTLRGTRRVRQGNAEHVALHPPASATAAMGRLGKTSNDDAHADDWKAYDRLRADVSGGTSRELSSGGSASAVARGDNGVGKDDGKMKLTAGGQRLKSSYNASGLAINVAAALLPQARSSFSGNGVSSPSPSPNRELPRSRTSIGGVAPSPERQLSAPIAAQRQLSFSSSAQPKLSVHPGGEPTHYLLRPQSLPGGAVGPQPNHDALLARLTGGSRAQPAVIAIPPPVVESAVVLGTAPILSDGNNASSWVKQVPDASSSSLHALEVAPSPPLVLNAMPLTGNMARVGMDQNNNNSPNTATNNNNDGESSVEIATEDWVFGLPDVPSDPKYHVVWQAAHDAVKKHLRPFVSKDKISRTEYSDIIRRATLKVCAAYEKRRLQLGCDASDRKIESLLRSSIDDGRIESLVREYIRIAKHSRRKASAVRVEG* # ORIGINAL: g14067.t1 original gene structure, not modified by PASA NODE_1486_length_10995_cov_66.4828 AUGUSTUS gene 2016 6750 . - . ID=g14067;Name=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS mRNA 2016 6750 . - . ID=g14067.t1;Parent=g14067;Name=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 6718 6750 . - . ID=g14067.t1.exon1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 6718 6750 . - 0 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 6448 6623 . - . ID=g14067.t1.exon2;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 6448 6623 . - 0 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 6050 6121 . - . ID=g14067.t1.exon3;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 6050 6121 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 5893 5964 . - . ID=g14067.t1.exon4;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 5893 5964 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 5738 5809 . - . ID=g14067.t1.exon5;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 5738 5809 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 5430 5501 . - . ID=g14067.t1.exon6;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 5430 5501 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 5118 5189 . - . ID=g14067.t1.exon7;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 5118 5189 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 4960 5031 . - . ID=g14067.t1.exon8;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 4960 5031 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 4642 4713 . - . ID=g14067.t1.exon9;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 4642 4713 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 4488 4559 . - . ID=g14067.t1.exon10;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 4488 4559 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 4332 4403 . - . ID=g14067.t1.exon11;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 4332 4403 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 3654 3913 . - . ID=g14067.t1.exon12;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 3654 3913 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 3325 3536 . - . ID=g14067.t1.exon13;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 3325 3536 . - 2 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 2971 3059 . - . ID=g14067.t1.exon14;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 2971 3059 . - 0 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 2661 2846 . - . ID=g14067.t1.exon15;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 2661 2846 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 2449 2582 . - . ID=g14067.t1.exon16;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 2449 2582 . - 1 ID=cds.g14067.t1;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 2016 2344 . - . ID=g14067.t1.exon17;Parent=g14067.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 2016 2344 . - 2 ID=cds.g14067.t1;Parent=g14067.t1 #PROT g14067.t1 g14067 MEKRVCLGGVLGNQRSQLAVHVGLCRLSALVVAVCLLYQAEGVIGACPDTCTCNGGAVLSCAIPTGTTFFGLDSNQIATLPSGIFDKLTALTYLQLGSNRIATLPSGIFDKLTALTYLSLYSNQIATLPSGIFDKLTALTYLDLYSNQIATLPSGIFDKLTALTSISLYSNQIATLPSGIFDKLTALTSIDISSNQIATLPSGIFDKLTALTSLSLYSNQIATLPSGIFDKLAALAMLDISSNRIATLPSGIFDKLIALNSLSLSSNQIATLPSGIFDKLPTLYYLFTGDCTVGASSSGDVAGPVAGGVVGAIVGAAGIVFAILFVRKRMSRKKMEALARSELDLIDTVVRRPEITEIEILGSCIHLHNRIGEGEFGEVYLADITPRGGSAVIRAAVKTFKVTSLSSVDEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQQRLTPLVLNLVNADIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNALENGWKLSPKAQVIVKVADMGLSRDTGATDYYAAKTRRKLPVKWMAPESLQKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENHAVSTYLSQNKRMGPPKDCPNLAYAAMEACWRKHAETRPQLSQLVLQLRRGMTVLCGTERGGGGANATDSSAALEKSETYALIVPEGVYAETVKDAAEDGSLHTLQNPIFQQR* # ORIGINAL: g14068.t1 original gene structure, not modified by PASA NODE_1486_length_10995_cov_66.4828 AUGUSTUS gene 8068 9033 . - . ID=g14068;Name=g14068.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS mRNA 8068 9033 . - . ID=g14068.t1;Parent=g14068;Name=g14068.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 8068 9033 . - . ID=g14068.t1.exon1;Parent=g14068.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 8068 9033 . - 0 ID=cds.g14068.t1;Parent=g14068.t1 #PROT g14068.t1 g14068 MQTYEPMLDPKQSRLTAFPINQDRHPLWKLYKTAENAATWKATDVNFNEDANNWESMTPDAQYFILHVLAFFASSDAIVNQFIETEFSSQVKWLEAKYFYDLQKKVENVHAETYSRMILAYVKDPQEKLKLLDAIQTFPTIKKMADWAFKWMEESRSFAISLIANLVFESVFFSGSFCAIFYIKKQGILPGLTQANELISRDENLHCMFGCLMFSYLQNKPSEETVKAIFKEGVDISKEFITDALPCSLIGMNADLMSQYIEFVADRTLRHLGLTPLYGSVNPFDFMELMGLELNTNFLDTPSSSYQTSGGERTFVLDAEF* # ORIGINAL: g14066.t1 original gene structure, not modified by PASA NODE_1486_length_10995_cov_66.4828 AUGUSTUS gene 401 1045 . + . ID=g14066;Name=g14066.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS mRNA 401 1045 . + . ID=g14066.t1;Parent=g14066;Name=g14066.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 401 1045 . + . ID=g14066.t1.exon1;Parent=g14066.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 401 1045 . + 0 ID=cds.g14066.t1;Parent=g14066.t1 #PROT g14066.t1 g14066 MAQETHEENNLVAQEENDFVVRGRFPASGSWLPHLGPIFASDKFAQLTKFVNEERAAHTVFPPEEDVYTWAKMPLDKVRVVILGQDVYHGPGQAHGLSFSVRRGVRIPPSLANIYKELADSQPGWIAPNHGCLEHWVDQGVLLLNTILTVRQSQPGSHAKRGWEELTDAVICESREVQRRVHVVGKFCPVQSASHRRTKAFGVEGATSLAIVGG* # ORIGINAL: g14069.t1 original gene structure, not modified by PASA NODE_1486_length_10995_cov_66.4828 AUGUSTUS gene 9296 10207 . - . ID=g14069;Name=g14069.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS mRNA 9296 10207 . - . ID=g14069.t1;Parent=g14069;Name=g14069.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS exon 9296 10207 . - . ID=g14069.t1.exon1;Parent=g14069.t1 NODE_1486_length_10995_cov_66.4828 AUGUSTUS CDS 9296 10207 . - 0 ID=cds.g14069.t1;Parent=g14069.t1 #PROT g14069.t1 g14069 MSDDSKRNLFTYIAEILITAVAFFILIPDFKTVFFSNNIFDLLTAPYFTERVSVASGLVIALYLFELVYKPRSDWVLFVHHLTGLVITVFTIFNCHRYMGDIQVAMYAFRVLYFVNIMATTEQVIFIGMICRRSEYHKTAAIMFILSIIHTLFIKCSATVGVIYSLSVGFFSNFHNLTTPAAKAYCVLVLIIALLLSGSQLYIVKIYFYLYKSSMQVVRERQQDTENATKSQTPRFGGPLAGKPRLTHRTSAILRQKRFTMARLDQRDIDTATEALGENRPVVIVTAERIDKSHSNDSKRASV* # ORIGINAL: g7748.t1 original gene structure, not modified by PASA NODE_3986_length_2396_cov_38.1357 AUGUSTUS gene 1966 2250 . - . ID=g7748;Name=g7748.t1 NODE_3986_length_2396_cov_38.1357 AUGUSTUS mRNA 1966 2250 . - . ID=g7748.t1;Parent=g7748;Name=g7748.t1 NODE_3986_length_2396_cov_38.1357 AUGUSTUS exon 1966 2250 . - . ID=g7748.t1.exon1;Parent=g7748.t1 NODE_3986_length_2396_cov_38.1357 AUGUSTUS CDS 1966 2250 . - 0 ID=cds.g7748.t1;Parent=g7748.t1 #PROT g7748.t1 g7748 MAAAEGHVDCVRTLSASLLKMVDKVTGQFLPFYRGGRAFSCLDLFVAEEAAKRNAHAACAEAVREAIVYCENARRKNAKPLLAPTSPSSSIVST* # PASA_UPDATE: g2486.t1, single gene model update, valid-1, status:[pasa:asmbl_1684,status:12],[pasa:asmbl_1685,status:13], valid-1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . gene 132 2045 . - . ID=g2486;Name=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . mRNA 132 2045 . - . ID=g2486.t1;Parent=g2486;Name=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . five_prime_UTR 1578 2045 . - . ID=g2486.t1.utr5p1;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . exon 1452 2045 . - . ID=g2486.t1.exon1;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . CDS 1452 1577 . - 0 ID=cds.g2486.t1;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . exon 1072 1138 . - . ID=g2486.t1.exon2;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . CDS 1072 1138 . - 0 ID=cds.g2486.t1;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . exon 515 646 . - . ID=g2486.t1.exon3;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . CDS 515 646 . - 2 ID=cds.g2486.t1;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . exon 132 226 . - . ID=g2486.t1.exon4;Parent=g2486.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . CDS 132 226 . - 2 ID=cds.g2486.t1;Parent=g2486.t1;3_prime_partial=true #PROT g2486.t1 g2486 MPVKDMVQSWLKRLDYYLNSRSTSAMERLRAVLNIKAQATVESHNFEIFNNEKYRDMVAAASIRERRTVAAYRWAVYIISAALVALVFVVMTISADRLIKLRFSLLRDYIAAHDFGASWGLNFLMMTFLASIGCFTVLIE # ORIGINAL: g2487.t1 original gene structure, not modified by PASA NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS gene 4213 4758 . + . ID=g2487;Name=g2487.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS mRNA 4213 4758 . + . ID=g2487.t1;Parent=g2487;Name=g2487.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS exon 4213 4758 . + . ID=g2487.t1.exon1;Parent=g2487.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS CDS 4213 4758 . + 0 ID=cds.g2487.t1;Parent=g2487.t1 #PROT g2487.t1 g2487 MLLVTFEIRKTNLVLTEDTMKYEAVYTALESLRPFQRSMLSIKNLAEGDDYSVLIWASPRTRNEIMGTAWNHEPVKRGSEPKVGYCTHGPCLYDVLRTDGRTGEVTVYQRLQAIEMAEKIMKTYYPCRKPDSCSIALITDTADCTREDGTESDDDTENSDNNDDSDQSDGESTKERRQSEF* # PASA_UPDATE: novel_model_6_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_1686,status:3], valid-1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . gene 2753 3608 . + . ID=novel_gene_6_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1468_length_11103_cov_34.6184_potentialcontaminant . mRNA 2753 3608 . + . ID=novel_model_6_5b6be656;Parent=novel_gene_6_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1468_length_11103_cov_34.6184_potentialcontaminant . five_prime_UTR 2753 3029 . + . ID=novel_model_6_5b6be656.utr5p1;Parent=novel_model_6_5b6be656 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . exon 2753 3608 . + . ID=novel_model_6_5b6be656.exon1;Parent=novel_model_6_5b6be656 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . CDS 3030 3428 . + 0 ID=cds.novel_model_6_5b6be656;Parent=novel_model_6_5b6be656 NODE_1468_length_11103_cov_34.6184_potentialcontaminant . three_prime_UTR 3429 3608 . + . ID=novel_model_6_5b6be656.utr3p1;Parent=novel_model_6_5b6be656 #PROT novel_model_6_5b6be656 novel_gene_6_5b6be656 MWTFRRWRKSIVRSTRTCAKSNFTTSGLYNRKYIEDATFRDEVKATTHDGRLVLDGCNRSEANPELGAFAGVYSASIDCTPVSDMAPLRDVLELVVWPFCLVMSLFVNLQRLVVHSGSIVNAALLSTQPPPS* # ORIGINAL: g2488.t1 original gene structure, not modified by PASA NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS gene 8989 10740 . - . ID=g2488;Name=g2488.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS mRNA 8989 10740 . - . ID=g2488.t1;Parent=g2488;Name=g2488.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS exon 8989 10740 . - . ID=g2488.t1.exon1;Parent=g2488.t1 NODE_1468_length_11103_cov_34.6184_potentialcontaminant AUGUSTUS CDS 8989 10740 . - 0 ID=cds.g2488.t1;Parent=g2488.t1 #PROT g2488.t1 g2488 MSAVNFDSVPIEVFMSHVVPLLKEPELAALSKVNRVLRFHLLPRRLFELWPLYNNKFLNDAAFREEVTSVLPRNRLVLTGSRVKDVTPFEGVHTAILDSPECTDLRPLAGVHTLKTKGGPIKKGETQLDFSALGNVQVFHIEACGRLNMSLLKGADTVHYHGKGATFSQSSWNVRYLQIDETQAATLPPLPQIHTIELDGNSLPDLSFISSSPTCKVLRLLSKWAPLPADLSFVSRLHTVVLTHPKFSVAPAALGNIHTLELRYAKDLEDVSALGNHHSLFISGCGELSVVGNLCRVHSLTLESCSRYCEPGDISKLGKVHTLILDYSNVGDVSQLGGVHSLSLDHCDITAGVRNLGTVHTLNLNRLGHQHDDDVQYLGGVHHLRLSKSSVTDVSALSNVHTLILDDCEGVVDVSSLGNVHTLSLRYCSVVDVSALCNVHALDLTGTKVTDISALTHVHTLSAGTRSIAGRAPLLYCHTLDLTGCSICDVSLLGSVHTLSLRGCKLVRDVSMLGNVHSLSLRGNSGLDVGSLGAVHTLDLSYCAGLQNLSKLARVCILDISNFRGLSQADVDLLARSVRKLTC* # ORIGINAL: g7149.t1 original gene structure, not modified by PASA NODE_3802_length_2722_cov_32.0042 AUGUSTUS gene 352 2612 . + . ID=g7149;Name=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS mRNA 352 2612 . + . ID=g7149.t1;Parent=g7149;Name=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS exon 352 620 . + . ID=g7149.t1.exon1;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS CDS 352 620 . + 0 ID=cds.g7149.t1;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS exon 882 1134 . + . ID=g7149.t1.exon2;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS CDS 882 1134 . + 1 ID=cds.g7149.t1;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS exon 1421 1575 . + . ID=g7149.t1.exon3;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS CDS 1421 1575 . + 0 ID=cds.g7149.t1;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS exon 1886 2612 . + . ID=g7149.t1.exon4;Parent=g7149.t1 NODE_3802_length_2722_cov_32.0042 AUGUSTUS CDS 1886 2612 . + 1 ID=cds.g7149.t1;Parent=g7149.t1 #PROT g7149.t1 g7149 DLGANEIISWNFLEFEVIYPSLANEIKIGDHYIRILLEQGAKAGLIANPLEFFNDLYHRFLLSTTPQLKSVCLQAMAIVYSECHENIGTFNDTTFFVAMLMNAGGKEERDRLLVFIHQLMLVEKNAKLFIDANGVRALVDLLTLAHLHTDRATTPMQSNMIEAGSASKPEKSKEWYYAVGEEQRKGPHSIDEIIDMFNAGQLKADSKCWSQGLEGWRKMTDIPQLRWQVVDRSKPVMNETELATLALKTLIRVVEFYPTRDKDGAIVRPLPRAKRQLSDPSVLPHLVNLFLTFDPVLVEKTATLLHNVMQDNPMMPRLFLSGAFYFALMYTGSNVLPIARLFTYTHTRQAFRAEEGHRSVLSAALPEAMVCFLENHGPERFSEIFLGDFDTPEAIWNHEMRRHMIGKIAVHLAEFTPRLQSNTRALFLHCPMASVIYPELERELFCGIYYLRHLCDTVRFPDWPIINQ # ORIGINAL: g1811.t1 original gene structure, not modified by PASA NODE_3651_length_3025_cov_32.3031 AUGUSTUS gene 801 1070 . - . ID=g1811;Name=g1811.t1 NODE_3651_length_3025_cov_32.3031 AUGUSTUS mRNA 801 1070 . - . ID=g1811.t1;Parent=g1811;Name=g1811.t1 NODE_3651_length_3025_cov_32.3031 AUGUSTUS exon 801 1070 . - . ID=g1811.t1.exon1;Parent=g1811.t1 NODE_3651_length_3025_cov_32.3031 AUGUSTUS CDS 801 1070 . - 0 ID=cds.g1811.t1;Parent=g1811.t1 #PROT g1811.t1 g1811 MEVYHGDIAVVGDVERNFGTYALVSFTSLRLMAKPGRYRLRISSSNRLIYGKNDTSTTRRNLLSNAVSVISESTLESAKVPTRPQASRN* # ORIGINAL: g1831.t1 original gene structure, not modified by PASA NODE_4403_length_1665_cov_25.56 AUGUSTUS gene 362 1375 . + . ID=g1831;Name=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS mRNA 362 1375 . + . ID=g1831.t1;Parent=g1831;Name=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS exon 362 449 . + . ID=g1831.t1.exon1;Parent=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS CDS 362 449 . + 1 ID=cds.g1831.t1;Parent=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS exon 716 904 . + . ID=g1831.t1.exon2;Parent=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS CDS 716 904 . + 0 ID=cds.g1831.t1;Parent=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS exon 1272 1375 . + . ID=g1831.t1.exon3;Parent=g1831.t1 NODE_4403_length_1665_cov_25.56 AUGUSTUS CDS 1272 1375 . + 0 ID=cds.g1831.t1;Parent=g1831.t1 #PROT g1831.t1 g1831 QSMREDLSKGVTLVLDRYAFSGVAFTAAKGYDLDWCKGPDVGLPTPDLIVYLDLSIEEAVKRGKFGEERYEKRDFQEKVAAIFKRLATPSWQIVDAAVTVDALEQRLRNLVGGALDAVKRDVPPIG # ORIGINAL: g2710.t1 original gene structure, not modified by PASA NODE_6662_length_529_cov_107.121_potentialcontaminant AUGUSTUS gene 3 341 . - . ID=g2710;Name=g2710.t1 NODE_6662_length_529_cov_107.121_potentialcontaminant AUGUSTUS mRNA 3 341 . - . ID=g2710.t1;Parent=g2710;Name=g2710.t1 NODE_6662_length_529_cov_107.121_potentialcontaminant AUGUSTUS exon 3 341 . - . ID=g2710.t1.exon1;Parent=g2710.t1 NODE_6662_length_529_cov_107.121_potentialcontaminant AUGUSTUS CDS 3 341 . - 0 ID=cds.g2710.t1;Parent=g2710.t1 #PROT g2710.t1 g2710 MPDVTVREEIPFWDPTDRRVVWLNDNITPSWEDTGDGKKYRDLLNGPPSKAFQAIFPEEALSYEKAFKSGMPRSPPIAFSSWKRHCTACRTVVYELCAAATKQVLRDLLRGP* # PASA_UPDATE: g11182.t1, single gene model update, valid-1, status:[pasa:asmbl_9002,status:12], valid-1 NODE_712_length_18748_cov_40.2877 . gene 17074 18525 . - . ID=g11182;Name=g11182.t1 NODE_712_length_18748_cov_40.2877 . mRNA 17074 18525 . - . ID=g11182.t1;Parent=g11182;Name=g11182.t1 NODE_712_length_18748_cov_40.2877 . exon 18351 18525 . - . ID=g11182.t1.exon1;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . CDS 18351 18525 . - 0 ID=cds.g11182.t1;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . exon 17877 18013 . - . ID=g11182.t1.exon2;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . CDS 17877 18013 . - 2 ID=cds.g11182.t1;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . exon 17074 17495 . - . ID=g11182.t1.exon3;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . CDS 17301 17495 . - 0 ID=cds.g11182.t1;Parent=g11182.t1 NODE_712_length_18748_cov_40.2877 . three_prime_UTR 17074 17300 . - . ID=g11182.t1.utr3p1;Parent=g11182.t1 #PROT g11182.t1 g11182 MDKASKSWRERGEGHLKVNRLKPTLSEKKEEESKEGSKDESKEGETDGAAKKAAEYRLVMRTAGSLRLLLNTPLFDGMAFDRASAKSIRFTAVEGSQITSYLIMVSRPDANMLLDRIQELIKLAHPPGEAPPEREKTEEEKERERLKKEEAERAAAQDNDGSSGEESA* # PASA_UPDATE: g11181.t1, single gene model update, valid-1, status:[pasa:asmbl_9001,status:12],[pasa:asmbl_9003,status:12], valid-1 NODE_712_length_18748_cov_40.2877 . gene 13235 16949 . + . ID=g11181;Name=g11181.t1 NODE_712_length_18748_cov_40.2877 . mRNA 13235 16949 . + . ID=g11181.t1;Parent=g11181;Name=g11181.t1 NODE_712_length_18748_cov_40.2877 . five_prime_UTR 13235 13502 . + . ID=g11181.t1.utr5p1;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . exon 13235 14332 . + . ID=g11181.t1.exon1;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . CDS 13503 14332 . + 0 ID=cds.g11181.t1;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . exon 14649 15608 . + . ID=g11181.t1.exon2;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . CDS 14649 15608 . + 1 ID=cds.g11181.t1;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . exon 15886 16949 . + . ID=g11181.t1.exon3;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . CDS 15886 16156 . + 1 ID=cds.g11181.t1;Parent=g11181.t1 NODE_712_length_18748_cov_40.2877 . three_prime_UTR 16157 16949 . + . ID=g11181.t1.utr3p1;Parent=g11181.t1 #PROT g11181.t1 g11181 MENRYIGELESLLAGLSSETYDTLSAHAHQGVQVHDAGHGNGSNILGENVVGGDNNNYNSHNNNHGGPALTSVEKFPANYPPQSLSMQQLLPSSAQHRGSFAPPLEDIPDSTANHYSLELPLHSQGMSVSEMLPPLAHVAPRTTPPHAPHASMGYDIMSHQRLQQQQQQQQQQQQQQQQQQQQQQQQQQYLLHQEQQQYGVHTPQRTPSVHTPRSRPASSPARLDLADGSSGAEHASPTTFTQTEAIVHVFRQYGNDPLNVLQIRDRLINHGLYKNSIQPVNIKSCFARKWFLALFHVTQDPEGQRYYQLKHEVLARPMSPAHSSPVGSEVRTPQPKSQHLHQHQPLHQPQHQSQSKALSQPPSQSQHQSHHQPRHLHHQHQHQLSSPNTDPYRDYMALGMLEEPFQPPGITMSSFVVSPRLNTDGHVGAGGDDADTADPQHNDSGIGDEDGQGGNGDEGEDGEGGDGGDGDGHIVHRSIMHDDAVTHGGIHDGIHDGIHGSGNTMHYSDVGGGLDHGGEGHVDDIRSDGDDGDDAGDDGDGDADDVNEDGDDGDGGDDDHAGEYTDGGESDLGLGASLGVDLMEPLLHRQRLDSKRKNSIDFDAVDANNRVELALRPPKMARSSVVGVVPDSSDGYAQLSQYEALLNATAGGAGGAGVVDGVFTHPLSQGMVYGVMDAAWNAHAQ* # ORIGINAL: g11180.t1 original gene structure, not modified by PASA NODE_712_length_18748_cov_40.2877 AUGUSTUS gene 10975 11601 . + . ID=g11180;Name=g11180.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS mRNA 10975 11601 . + . ID=g11180.t1;Parent=g11180;Name=g11180.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 10975 11601 . + . ID=g11180.t1.exon1;Parent=g11180.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 10975 11601 . + 0 ID=cds.g11180.t1;Parent=g11180.t1 #PROT g11180.t1 g11180 MGCRVRAVEPQTPLVRFLRASLDVNGWDSDDSVELFEAAVGETPGTLLLKMLWVPGNVPNKWKKEVVAPIVPLYDIITSDVAFLKLDIDGPEVFVFRALLPLLKKGLRVSNIMAEITFGKWPIWFNVSHTEGYRLLDQYYDHGYKLYLTGAGLFPIYEKRVTSNLILLSPFQYFTAVYEIPRLHLENVLLMNNVSTKNIYFTQERLRY* # ORIGINAL: g11178.t1 original gene structure, not modified by PASA NODE_712_length_18748_cov_40.2877 AUGUSTUS gene 4984 9323 . + . ID=g11178;Name=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS mRNA 4984 9323 . + . ID=g11178.t1;Parent=g11178;Name=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 4984 5180 . + . ID=g11178.t1.exon1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 4984 5180 . + 0 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 5415 5484 . + . ID=g11178.t1.exon2;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 5415 5484 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 5868 6081 . + . ID=g11178.t1.exon3;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 5868 6081 . + 0 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 6238 6305 . + . ID=g11178.t1.exon4;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 6238 6305 . + 2 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 6713 6867 . + . ID=g11178.t1.exon5;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 6713 6867 . + 0 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 7252 7362 . + . ID=g11178.t1.exon6;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 7252 7362 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 7526 7610 . + . ID=g11178.t1.exon7;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 7526 7610 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 7811 7980 . + . ID=g11178.t1.exon8;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 7811 7980 . + 0 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 8189 8314 . + . ID=g11178.t1.exon9;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 8189 8314 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 8513 8617 . + . ID=g11178.t1.exon10;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 8513 8617 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 8884 8997 . + . ID=g11178.t1.exon11;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 8884 8997 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 9257 9323 . + . ID=g11178.t1.exon12;Parent=g11178.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 9257 9323 . + 1 ID=cds.g11178.t1;Parent=g11178.t1 #PROT g11178.t1 g11178 MSQYARLTDGQNEEDSSLSQATPSLNTDASASAVQAAAAVSAASVQLAQHAAVVRARSVPWEGFVGAGIISNNELEMLRSFDQRGSAVQSELLLANGKMYAGLFLKLLSKLNADEPLEYVLTLVDDLITEDEERVRLFHQVSEERNTTPLRPFLQLLAKENSYVFNKANKVLAILASTGSPLEGEPLAFYLDWISRNLRGSDDVTVESVVGALQFLLRSDAYRLAFFQQQSGVKGLLDILSNRRPNFQLQYMVIFDFWLLAFNPTVAGELYKTGAIGVLAEVLKTSNKEKVSRITIATYRNILVKASSKVASAAAMVQAKLLPHVTSMSARQWADEDMTEDITTVLDALRLSVQDMSSFDQYAAELRSGKLEWTPVHRSEKFWHENVMRLNENDFELVKLLVEVIQRSNTDAIALAVAAHDIGEYVRRNPRGKSAVEKYNGKSAVMQLMGHRDNAVRYEALLAVQKLMVNNWEYLGTQLPPTNAQAVKAGGKK* # PASA_UPDATE: g11176.t1, single gene model update, valid-1, status:[pasa:asmbl_9004,status:12], valid-1 NODE_712_length_18748_cov_40.2877 . gene 235 1449 . - . ID=g11176;Name=g11176.t1 NODE_712_length_18748_cov_40.2877 . mRNA 235 1449 . - . ID=g11176.t1;Parent=g11176;Name=g11176.t1 NODE_712_length_18748_cov_40.2877 . five_prime_UTR 1361 1449 . - . ID=g11176.t1.utr5p1;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . exon 1295 1449 . - . ID=g11176.t1.exon1;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . CDS 1295 1360 . - 0 ID=cds.g11176.t1;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . exon 756 1057 . - . ID=g11176.t1.exon2;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . CDS 756 1057 . - 0 ID=cds.g11176.t1;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . exon 235 448 . - . ID=g11176.t1.exon3;Parent=g11176.t1 NODE_712_length_18748_cov_40.2877 . CDS 235 448 . - 1 ID=cds.g11176.t1;Parent=g11176.t1;3_prime_partial=true #PROT g11176.t1 g11176 MMHALRLVSPLRRTALATTRSSVAGFHASSLRASDSLFVHRDSKENNESVPFDFTAENRARADAIIGNYPVNHKRAALLPLLDLAQRQHGWLPIAAMNKVAEILEIPKMRAYEVATFYTMFNRQPVGKYFLQVCTTTPCMLGGCGSTSIMHAIEKHLGIHNGQTTKDGVFSLLEVECLGACVNAPMVQINDDFY # ORIGINAL: g11177.t1 original gene structure, not modified by PASA NODE_712_length_18748_cov_40.2877 AUGUSTUS gene 2196 4196 . + . ID=g11177;Name=g11177.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS mRNA 2196 4196 . + . ID=g11177.t1;Parent=g11177;Name=g11177.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 2196 4196 . + . ID=g11177.t1.exon1;Parent=g11177.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 2196 4196 . + 0 ID=cds.g11177.t1;Parent=g11177.t1 #PROT g11177.t1 g11177 MELATLQVLGKRNAIALGFATALLLSIVVFFASFGSLQKYDGGGVDSPLADGRAGGQQEHGRDMHAAAAGEVARNGVLHDPIAQETSGPMHIHPRKAGTKVDIADNGGESAKTKRPCDSAEHPWWVTGRDTNGDGTIQVNEYFDRVLYLNVDFLTERRDVMRALFAAHGIHAERFSQYALSNPFLTSLHTEYVQRSLNPFESRMKRGKLMSNVTPFAYLKSCEGLIRLAKQRGYRRILLLDDTVTFHVNFTTEFDRKVRLLPADWKLLYLGASQFMWHGRSLTWDTSRNDEFYHPRLTDGGFAVGIDASVYDILLFEMEKVTSPFDAGALRAVLAAFHKQSFVFYPNLVIRTRAYFPTKKLPTGKVYEDAVRWDMSLYSARPPPAPLPKVCIVVTFKNAQDTIAYSLDSLLRQTYTNIEIVAVDDFSDDQSAAIVEDIALKNNRITLLRNPVNVGTYVSRNNGLRLCTGEIYMNHDADDVSMEDRVATQIVPILDNRAEITTSLFIRAHIGIADFKYNAREVLRRANLLRVHKTNNDFKYCCKEKLGLMTTMIKVEVFNRIGYFDETRYSGDAEFLERYLALTMNRFITSGVFNIHTYLWLKAAPETLEPYIVLIQRTLLVAADLDNSITHSVPLSGKDRSEYEHEYRQKIVARMNPDAGSYNPFY* # ORIGINAL: g11179.t1 original gene structure, not modified by PASA NODE_712_length_18748_cov_40.2877 AUGUSTUS gene 10446 10901 . + . ID=g11179;Name=g11179.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS mRNA 10446 10901 . + . ID=g11179.t1;Parent=g11179;Name=g11179.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS exon 10446 10901 . + . ID=g11179.t1.exon1;Parent=g11179.t1 NODE_712_length_18748_cov_40.2877 AUGUSTUS CDS 10446 10901 . + 0 ID=cds.g11179.t1;Parent=g11179.t1 #PROT g11179.t1 g11179 MRQLGPTVRLVSVAAGLFLVCAVLYTQVNPYDIGTGHSMRLSRASSSDSAESGQAGPDTKTPALDDHASELKVAAGRASIRRVSPFEDIALTIRAVVRNGVTVIPAHKMVATDLYGACSFGEHCSRFEEQTVDQQTRPLGLAHKPRRKVHT* # PASA_UPDATE: g12273.t1, single gene model update, valid-1, status:[pasa:asmbl_2881,status:12], valid-1 NODE_1878_length_8749_cov_34.9372 . gene 219 1358 . + . ID=g12273;Name=g12273.t1 NODE_1878_length_8749_cov_34.9372 . mRNA 219 1358 . + . ID=g12273.t1;Parent=g12273;Name=g12273.t1 NODE_1878_length_8749_cov_34.9372 . exon 219 290 . + . ID=g12273.t1.exon1;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . CDS 219 290 . + 0 ID=cds.g12273.t1;Parent=g12273.t1;5_prime_partial=true NODE_1878_length_8749_cov_34.9372 . exon 465 565 . + . ID=g12273.t1.exon2;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . CDS 465 565 . + 0 ID=cds.g12273.t1;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . exon 802 859 . + . ID=g12273.t1.exon3;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . CDS 802 859 . + 1 ID=cds.g12273.t1;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . exon 1113 1358 . + . ID=g12273.t1.exon4;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . CDS 1113 1307 . + 0 ID=cds.g12273.t1;Parent=g12273.t1 NODE_1878_length_8749_cov_34.9372 . three_prime_UTR 1308 1358 . + . ID=g12273.t1.utr3p1;Parent=g12273.t1 #PROT g12273.t1 g12273 AYFFRGHEYVRFDILTSTQDPGYPQPIDSASWMGLTFDGVDAVLKWNEGRAYFFHNGMYATYNVELDRAEGAPKAVQVKEDYRNYFTSDADCLFDMNLDPHALSTGLIAFDNSSADSVASAARRDSDGYAATPADAQDWMF* # PASA_UPDATE: g12274.t1, single gene model update, valid-1, status:[pasa:asmbl_2883,status:12],[pasa:asmbl_2884,status:12], valid-1 NODE_1878_length_8749_cov_34.9372 . gene 1747 8645 . - . ID=g12274;Name=g12274.t1 NODE_1878_length_8749_cov_34.9372 . mRNA 1747 8645 . - . ID=g12274.t1;Parent=g12274;Name=g12274.t1 NODE_1878_length_8749_cov_34.9372 . five_prime_UTR 8644 8645 . - . ID=g12274.t1.utr5p1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 8287 8645 . - . ID=g12274.t1.exon1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 8287 8643 . - 0 ID=cds.g12274.t1;Parent=g12274.t1;5_prime_partial=true NODE_1878_length_8749_cov_34.9372 . exon 7677 7754 . - . ID=g12274.t1.exon2;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 7677 7754 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 7057 7182 . - . ID=g12274.t1.exon3;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 7057 7182 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 6435 6572 . - . ID=g12274.t1.exon4;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 6435 6572 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 5701 5823 . - . ID=g12274.t1.exon5;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 5701 5823 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 5059 5217 . - . ID=g12274.t1.exon6;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 5059 5217 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 4705 4786 . - . ID=g12274.t1.exon7;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 4705 4786 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 4442 4534 . - . ID=g12274.t1.exon8;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 4442 4534 . - 2 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 4120 4208 . - . ID=g12274.t1.exon9;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 4120 4208 . - 2 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 3513 3632 . - . ID=g12274.t1.exon10;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 3513 3632 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 3166 3303 . - . ID=g12274.t1.exon11;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 3166 3303 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . exon 1747 2853 . - . ID=g12274.t1.exon12;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . CDS 2341 2853 . - 0 ID=cds.g12274.t1;Parent=g12274.t1 NODE_1878_length_8749_cov_34.9372 . three_prime_UTR 1747 2340 . - . ID=g12274.t1.utr3p1;Parent=g12274.t1 #PROT g12274.t1 g12274 AVAPAYTAQSVATPPRYNGAHAPVAASAPIASPAPPPSTGFSLLDLDVPVMRPQQPSSQQQQQQQQQQQQHQQQHHAPAPVTVPALQPPQHAQPQAQQQPQQQPQQQIQASALPSIKDIYSFQLTPPNARLRLGTQLYEKYISAKSAIRVPNITDAEAEAIRVGLDTQGEPKQDLFEPAIAANRVFLRGEPFAAFFDSHYFSRYLQWKFLEQRPVDKDDFRLYRVLGKGGFGEVYACQKRDTGKMYAVKCLDKKRIKKKKGESLAWNERNLLAKVSSPFVVELKYAYETKERLCLVLDLMNGGDLQYHLSMSQTFEEERTRFYAAELVLGLQHLHKANIVYRDMKPENVLLNTKGHIRLSDMGLAIELIPPKKDTRGKVGTPGYMAPELLQAERYGASVDWWGLGCVLYEMIDGQCPFRKKKERIKQEELQERILTATIEYSSSFTPAARSLCEQLLDKDCKTRIGCRAAGVEDIKSHPYFASINWRRLEAGLVNPPFVPNQYTVNARDVLDIDRFDSVKDVKLDDTDVATFQNFAGTMTRPWQEEILETVFKELNEFDPANLPADLRTDIPYVDGSASTRGGFFSRLKQKLGKQKSVENGTISGVPKQNSSLNVATLPKSSSFVAGETVPNKAPLAPRSSADTLSKSAGHGTVKSPSERGIRMERAHTGP* # PASA_UPDATE: g3876.t1, single gene model update, valid-1, status:[pasa:asmbl_4118,status:12], valid-1 NODE_2354_length_6601_cov_66.9972 . gene 341 4534 . - . ID=g3876;Name=g3876.t1 NODE_2354_length_6601_cov_66.9972 . mRNA 341 4534 . - . ID=g3876.t1;Parent=g3876;Name=g3876.t1 NODE_2354_length_6601_cov_66.9972 . five_prime_UTR 4405 4534 . - . ID=g3876.t1.utr5p1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 4393 4534 . - . ID=g3876.t1.exon1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 4393 4404 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 4074 4115 . - . ID=g3876.t1.exon2;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 4074 4115 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 3737 3799 . - . ID=g3876.t1.exon3;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 3737 3799 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 3301 3435 . - . ID=g3876.t1.exon4;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 3301 3435 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 2428 2967 . - . ID=g3876.t1.exon5;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 2428 2967 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 2093 2137 . - . ID=g3876.t1.exon6;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 2093 2137 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 1659 1721 . - . ID=g3876.t1.exon7;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 1659 1721 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 1236 1466 . - . ID=g3876.t1.exon8;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 1236 1466 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 982 1059 . - . ID=g3876.t1.exon9;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 982 1059 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . exon 341 430 . - . ID=g3876.t1.exon10;Parent=g3876.t1 NODE_2354_length_6601_cov_66.9972 . CDS 341 430 . - 0 ID=cds.g3876.t1;Parent=g3876.t1 #PROT g3876.t1 g3876 MSQKEGYLSKQGAVGGALSWRKRWFVLKDGKLYYYKSNKHIEGELGVIDLSDCSKVEACGGTGLLIHTPNRIFKMEADAETSRNAWLTTLLPLVGPPAMPVAAFDGSAADEDEDGDVPLSESRQETELLNPDRPSARRVSMSSSSECSSGDTTEDELSGLDLSVSGRAMLASMSSTGASSTSSHGGHNHAHVHLQHLSEDVAKQQKDAEEAPATVTSTLAEIDGVSSLLIRRNSSDKITFDAAERAPIALTTAGAASAPAEEKKILLSGSLYKLGAFHKAWRRRWFVLEPTRIVYYKKDKDDRPLGIIELASCYGVERMDDTSGRSFCFKLSSQRRVFVMSTNNASELNVWLSALCVLVVAVEDAHGSDEEQLGQGKTIAPSSSTQETNTKSGWLTKQGGIHRSWRHRYFVLRGTKVSYYKTDEVSVVTVHT* # PASA_UPDATE: g3877.t1, single gene model update, valid-1, status:[pasa:asmbl_4119,status:12], valid-1 NODE_2354_length_6601_cov_66.9972 . gene 4630 6410 . - . ID=g3877;Name=g3877.t1 NODE_2354_length_6601_cov_66.9972 . mRNA 4630 6410 . - . ID=g3877.t1;Parent=g3877;Name=g3877.t1 NODE_2354_length_6601_cov_66.9972 . five_prime_UTR 6316 6410 . - . ID=g3877.t1.utr5p1;Parent=g3877.t1 NODE_2354_length_6601_cov_66.9972 . exon 5071 6410 . - . ID=g3877.t1.exon1;Parent=g3877.t1 NODE_2354_length_6601_cov_66.9972 . CDS 5071 6315 . - 0 ID=cds.g3877.t1;Parent=g3877.t1 NODE_2354_length_6601_cov_66.9972 . exon 4630 4840 . - . ID=g3877.t1.exon2;Parent=g3877.t1 NODE_2354_length_6601_cov_66.9972 . CDS 4748 4840 . - 0 ID=cds.g3877.t1;Parent=g3877.t1 NODE_2354_length_6601_cov_66.9972 . three_prime_UTR 4630 4747 . - . ID=g3877.t1.utr3p1;Parent=g3877.t1 #PROT g3877.t1 g3877 MRTLKKYDGPSYCATNDVFPPDLTGMITAKRSDRGNTIIPEEIALSVAQRVVDAMNVADKGIAVCQTTLTLPQFTMALAMTSRMASRPWVLDGIVRILQRYDPKKNLGRYHVQIYAVNKLTAERRFVSDIIMVDLPLSTAVKVHVLQRVKRSDEIGMFAHISNRPSVTAPATAMTPSFCGTCRPVGYTPNLQAHVHVIIPMKNQGSWLQHLLGDLRDLRHLTGDTRFDLTIADFASTDIDVDRALKESGLTYRLVRLEGTFKRAGGLQAGLDAVRANAIGIPMSERIVFLCDLHLLLATDIFDLVRMHTVRGIQAFAPVVSRMDCGHYPGPLLSDPPTYSVISGFGKSRPINNLMHGEPLSGSPYGYWELAGYGLLAMYVEDLDKVGGMNTVDYSDKRGGEDIDLLDRIVSMGYEIDRFRVPNFRHFYSGKRGLWVTTETPSDGK* # ORIGINAL: g11059.t1 original gene structure, not modified by PASA NODE_2908_length_4769_cov_36.1261 AUGUSTUS gene 3352 4243 . + . ID=g11059;Name=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS mRNA 3352 4243 . + . ID=g11059.t1;Parent=g11059;Name=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS exon 3352 3509 . + . ID=g11059.t1.exon1;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS CDS 3352 3509 . + 0 ID=cds.g11059.t1;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS exon 3639 3748 . + . ID=g11059.t1.exon2;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS CDS 3639 3748 . + 1 ID=cds.g11059.t1;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS exon 3965 4128 . + . ID=g11059.t1.exon3;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS CDS 3965 4128 . + 2 ID=cds.g11059.t1;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS exon 4226 4243 . + . ID=g11059.t1.exon4;Parent=g11059.t1 NODE_2908_length_4769_cov_36.1261 AUGUSTUS CDS 4226 4243 . + 0 ID=cds.g11059.t1;Parent=g11059.t1 #PROT g11059.t1 g11059 MDLESERKRPRLEDVQNASSVGPNVHAETVDTSYFRSYNGITIHQEMLRDFQRQSIMHHADFLKDKVVLDVGAGTGILSAFCVEAGAKKVYAVEASAIADQAAIVFAANERLRDRIVLIRQRMEDVVLPEKVDAIVSEWMGYFLTAPPT* # PASA_UPDATE: g11058.t1, single gene model update, valid-1, status:[pasa:asmbl_5220,status:3], valid-1 NODE_2908_length_4769_cov_36.1261 . gene 577 3253 . + . ID=g11058;Name=g11058.t1 NODE_2908_length_4769_cov_36.1261 . mRNA 577 3253 . + . ID=g11058.t1;Parent=g11058;Name=g11058.t1 NODE_2908_length_4769_cov_36.1261 . five_prime_UTR 577 594 . + . ID=g11058.t1.utr5p1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 577 723 . + . ID=g11058.t1.exon1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 595 723 . + 0 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 1301 1516 . + . ID=g11058.t1.exon2;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 1301 1516 . + 0 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 1676 1775 . + . ID=g11058.t1.exon3;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 1676 1775 . + 0 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 1937 2064 . + . ID=g11058.t1.exon4;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 1937 2064 . + 2 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 2399 2637 . + . ID=g11058.t1.exon5;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 2399 2637 . + 0 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . exon 2782 3253 . + . ID=g11058.t1.exon6;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . CDS 2782 3037 . + 1 ID=cds.g11058.t1;Parent=g11058.t1 NODE_2908_length_4769_cov_36.1261 . three_prime_UTR 3038 3253 . + . ID=g11058.t1.utr3p1;Parent=g11058.t1 #PROT g11058.t1 g11058 MESTEALLQRIMLSAAADDVEKWTLKDLGRAFRWARLAIQERPNDALGSTVDPSCPCASTLSSSAIKCESDFASLSPVQHLAAVLLQNVALPGPLYGEVLKELQATEGGAEFLVQFYSQLSQRTALMGLLNTISNVTVDAHDIAFDSADVNGLVCRLRAAVHAAAPNRQSFKEKYVDAAIKADVDQWAAMQWAVVVVIASLDSVSLGESLSYLENMFVRITCELRPPATTQIPLHRLWADRQLASAASTRSVRVFLKYTKDLMASYRNGCREGNSSHADVVDVCVRLSLLVTCATPLGGPCLGASVAAAASFLGAIASLPLSSTPDVALCVAELESVVRCGSLSSPNRDELSTSD* # ORIGINAL: g9135.t1 original gene structure, not modified by PASA NODE_621_length_20076_cov_41.4679 AUGUSTUS gene 1 2571 . - . ID=g9135;Name=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS mRNA 1 2571 . - . ID=g9135.t1;Parent=g9135;Name=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 2484 2571 . - . ID=g9135.t1.exon1;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 2484 2571 . - 0 ID=cds.g9135.t1;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 2123 2249 . - . ID=g9135.t1.exon2;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 2123 2249 . - 2 ID=cds.g9135.t1;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 839 1992 . - . ID=g9135.t1.exon3;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 839 1992 . - 1 ID=cds.g9135.t1;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 367 443 . - . ID=g9135.t1.exon4;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 367 443 . - 2 ID=cds.g9135.t1;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 1 147 . - . ID=g9135.t1.exon5;Parent=g9135.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 1 147 . - 0 ID=cds.g9135.t1;Parent=g9135.t1 #PROT g9135.t1 g9135 MPSLQTVIALTSLVLYLSLSLRPVSACEEDCLTAFPTIPVSFRELANEGVPPQPGFDDGTVCSGVIGAAGCSIFVPLRSPRSGFRALTSHHVVATDDQSLLYAATSYVALSNNGTTAKTDSSCRRVVKVTAFLHLSADDADAGPITRLQPLFSEALYDTTMSCGAALDDFVEVTNFVSLSGGMLSLSICGPLSLCAVHLLRVDNATNPHLSPHVRVLARIDIVAPRELRFDAYGEAVSVDSALLYDAESNGMPMDVRADGSMLRHRLVTWPVDPDGRKFGDSVVSSIAFVQTNATKATTGDIADGRVWERAPTKAVVTCADSPSDSTNDLSDCRCTATLPDAPVGTPLFLFAGDAVHLHNNCSLSRVEVALRSKNRETMRILASLVPGKLEAHMLSINHLVPAAIGDSLFLTFFVRANASSASDVARTTDIPGLVYPSGPLFHYYTLGLTKDDVIAAMGGVGGTTVQAYNYALCQFKWSELRGVSGLSTNDTTPLTLTRVIAASRRTGASQPIADILESFASADTNYDDAL # PASA_UPDATE: g9140.t1, single gene model update, valid-1, status:[pasa:asmbl_8529,status:12], valid-1 NODE_621_length_20076_cov_41.4679 . gene 16081 20047 . - . ID=g9140;Name=g9140.t1 NODE_621_length_20076_cov_41.4679 . mRNA 16081 20047 . - . ID=g9140.t1;Parent=g9140;Name=g9140.t1 NODE_621_length_20076_cov_41.4679 . exon 18870 20047 . - . ID=g9140.t1.exon1;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . CDS 18870 20047 . - 0 ID=cds.g9140.t1;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . exon 16800 18429 . - . ID=g9140.t1.exon2;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . CDS 16800 18429 . - 1 ID=cds.g9140.t1;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . exon 16081 16486 . - . ID=g9140.t1.exon3;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . CDS 16385 16486 . - 0 ID=cds.g9140.t1;Parent=g9140.t1 NODE_621_length_20076_cov_41.4679 . three_prime_UTR 16081 16384 . - . ID=g9140.t1.utr3p1;Parent=g9140.t1 #PROT g9140.t1 g9140 MNALALTRNPAVVCILQCATTHNKYATNTNNNTTTTPQQHHLTDSDCSDSSSPSSRKTSLSAVRPEDVEQRKRELAQLFAIAESQIDEATAEHEQALTTDNNNSNSSNSSNNNSNAHAPSAMRARTSVVQPAATAASSASESTSSKPSRPVSSESIDSIRRQREEREQVYSDAEKEILKALEDIDKIEQSAPRPRTSVVSGRQPAHHDHVAHAAAPSTAASLASPSPPISSSAPQVTHEIEREIASSATVTNAEKATPAASVALETPAVLQSAAAAESVPVPAIHVIPAVTVTSGGDASVPISVVPTVLTADLSKATVFKRGDEGDTATTLAEWLRLLGVAVNGGESTDSEVFACTEESTQRDLTASRHTIPEGIARDDGLAAARDAVKRIRSHPHGNVEAPLAAWSPPNSGSVIILAYCGTPSTSLREWISREGRTPATLNALRSIVRDLLRALAHLHDVGVVHGRISLDSAFVHTSSTGSPAAVLCRPSYGLLASKRTNHDDAWDFGCAIYEATVGRTAVLSPDSSRISLPKDADASLRHLVRGFTCRHVHRRASALSALLEHFPLGDGAAEDLFKRARRQTSLSQHGRRQSSAVMADQERLESFYDSVATRRSGAPTSLLIVDIASDARVASTALSAFECMGESDMYRPLRYVMPTRTPEDTPAVLAEGFYRLFFRLFVTDHRALFEWSVANGDASILPASGIARASLSMLEALGRMLVRCLVDGCRMPLPVSSAALKFLVGRPPSPRDLEAFSPESVQTTIADDDARHMAAHTAAAAESSAIQPPSWLQARSVLVEPRRAELEALKTGMKSSEAHQRLRRMSCFEISWLCCGQIDTVVEVSQWVADHFVCVGYAAESHVAAHFAAFVATASLAELRRLLYLVTCQCGIAGLRLVDGDRVTGAFEYGVREGVVRVRPPSQAERRHSMAGSPSQILFYVGEVVIPDFDDATKFASELRDSLEIADKV* # PASA_UPDATE: g9137.t1, single gene model update, valid-1, status:[pasa:asmbl_8528,status:3], valid-1 NODE_621_length_20076_cov_41.4679 . gene 7139 8741 . - . ID=g9137;Name=g9137.t1 NODE_621_length_20076_cov_41.4679 . mRNA 7139 8741 . - . ID=g9137.t1;Parent=g9137;Name=g9137.t1 NODE_621_length_20076_cov_41.4679 . five_prime_UTR 8619 8741 . - . ID=g9137.t1.utr5p1;Parent=g9137.t1 NODE_621_length_20076_cov_41.4679 . exon 8437 8741 . - . ID=g9137.t1.exon1;Parent=g9137.t1 NODE_621_length_20076_cov_41.4679 . CDS 8437 8618 . - 0 ID=cds.g9137.t1;Parent=g9137.t1 NODE_621_length_20076_cov_41.4679 . exon 7139 8244 . - . ID=g9137.t1.exon2;Parent=g9137.t1 NODE_621_length_20076_cov_41.4679 . CDS 7404 8244 . - 1 ID=cds.g9137.t1;Parent=g9137.t1 NODE_621_length_20076_cov_41.4679 . three_prime_UTR 7139 7403 . - . ID=g9137.t1.utr3p1;Parent=g9137.t1 #PROT g9137.t1 g9137 MAATTKPFDGWSTGEQVTQGLDLSGKIVVVTGANTGIGLEAARVFALRGATVVLGCRNKDRGEEAVRAIKDRHPHATVRFMRLDLASQASVREFAAAFLAAYAGKCHILVCNAAVFVLPNGYEETAEGIETTVGVHVGHFLLSNLLKDALVASAPSRLVIVSSESHAYPVSRLNVPNEPPKVETDADGHVVRVVPAPRSGGLWERFTTTFPLHSANYNHQWAYSQAKLCDVMFAREFSRRFGGRNGRDVLAVSLHPGNMIMTDIARNSLFYRIIFKIATVVTKTIEQGAANTLYCSTHPDIRPGAYYNNCAEKKLTAGAIDEEDAGRLWRWCETVTGIRT* # ORIGINAL: g9136.t1 original gene structure, not modified by PASA NODE_621_length_20076_cov_41.4679 AUGUSTUS gene 3042 6961 . + . ID=g9136;Name=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS mRNA 3042 6961 . + . ID=g9136.t1;Parent=g9136;Name=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 3042 3142 . + . ID=g9136.t1.exon1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 3042 3142 . + 0 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 3399 3488 . + . ID=g9136.t1.exon2;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 3399 3488 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 3664 3739 . + . ID=g9136.t1.exon3;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 3664 3739 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 3993 4180 . + . ID=g9136.t1.exon4;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 3993 4180 . + 0 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 4455 4606 . + . ID=g9136.t1.exon5;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 4455 4606 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 4901 4961 . + . ID=g9136.t1.exon6;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 4901 4961 . + 2 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 5164 5307 . + . ID=g9136.t1.exon7;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 5164 5307 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 5642 5737 . + . ID=g9136.t1.exon8;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 5642 5737 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 5913 6003 . + . ID=g9136.t1.exon9;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 5913 6003 . + 1 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 6260 6346 . + . ID=g9136.t1.exon10;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 6260 6346 . + 0 ID=cds.g9136.t1;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS exon 6623 6961 . + . ID=g9136.t1.exon11;Parent=g9136.t1 NODE_621_length_20076_cov_41.4679 AUGUSTUS CDS 6623 6961 . + 0 ID=cds.g9136.t1;Parent=g9136.t1 #PROT g9136.t1 g9136 MAVLGAEVLLTFATAVTLVRSAGVLALPERLFRGLVYYALPHDAELRQMFASSIASNESKKKNKNKTPPAPTELKVPKGEGAMNLDPRKITDHELVNHIYYLELETLLSLVSAATIVVALVDIYYGLVASPEIARTSKYSLVWLYIALLYSGKSIYNVSSLYFKATKELSILAAIAVLSFVFASAAVMQDGVIFDFGLDQGMCFSAIIDATNKLLSENGLLIKVDASLARYKLALAAMSGIVGGLLLYPCLRIARSHVAALSGAGSDLIQRALLHISFLAPVALSLAWVRPLGRDVFRDAGLESSEDTYDRIRIGAVFAFCAIRIWLARTHIQAYLNQAFERVKAATLPSTKKITVTELRNAIDSIYRLMVVVAIQILAPTLLLLCSCLALKMQGGFQWWQSPNDGTAPESHDDAASEHVQSNDSVDSRAFERNHPFTIFARGLLSYVCWWLCASQALLCWLGFAYVKVAEKTN* # PASA_UPDATE: g9138.t1, single gene model update, valid-1, status:[pasa:asmbl_8530,status:3], valid-1 NODE_621_length_20076_cov_41.4679 . gene 8868 10497 . + . ID=g9138;Name=g9138.t1 NODE_621_length_20076_cov_41.4679 . mRNA 8868 10497 . + . ID=g9138.t1;Parent=g9138;Name=g9138.t1 NODE_621_length_20076_cov_41.4679 . five_prime_UTR 8868 8937 . + . ID=g9138.t1.utr5p1;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . exon 8868 9070 . + . ID=g9138.t1.exon1;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . CDS 8938 9070 . + 0 ID=cds.g9138.t1;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . exon 9324 9499 . + . ID=g9138.t1.exon2;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . CDS 9324 9499 . + 2 ID=cds.g9138.t1;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . exon 9669 10497 . + . ID=g9138.t1.exon3;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . CDS 9669 10313 . + 0 ID=cds.g9138.t1;Parent=g9138.t1 NODE_621_length_20076_cov_41.4679 . three_prime_UTR 10314 10497 . + . ID=g9138.t1.utr3p1;Parent=g9138.t1 #PROT g9138.t1 g9138 MILRSLLGGPSAGIFLCLMPPTQLTAMAMHQHGSYTRLALQVVRGMAGHSKWRTIKHDKMEADAARNRSFLKISREIMSCVRANGPDPAENIRLSSAIARGRKIDMPLSRIESAIKAALDRGEDAEKAEQVFYEGRGPAGVAVMVQVLTDNRRRAHQDVKNVFTHTPGAVFSSGGGDVAWLFERKGIVTLEGTPDLPLPTGEGLVELALALDAEDVKEDGADDDAFGSGAGGAAARTRTRTRTVDVVCDPALVGSVHRAAMQRGFKVPSAAIEYVPKEHVTLAGEDAVEAYRDFEERLQDLGDVMRIYSNAVVEGDG* # PASA_UPDATE: g9139.t1, single gene model update, valid-1, status:[pasa:asmbl_8531,status:3], valid-1 NODE_621_length_20076_cov_41.4679 . gene 10929 14056 . + . ID=g9139;Name=g9139.t1 NODE_621_length_20076_cov_41.4679 . mRNA 10929 14056 . + . ID=g9139.t1;Parent=g9139;Name=g9139.t1 NODE_621_length_20076_cov_41.4679 . five_prime_UTR 10929 11073 . + . ID=g9139.t1.utr5p1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . exon 10929 11243 . + . ID=g9139.t1.exon1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . CDS 11074 11243 . + 0 ID=cds.g9139.t1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . exon 11369 11492 . + . ID=g9139.t1.exon2;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . CDS 11369 11492 . + 1 ID=cds.g9139.t1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . exon 11650 11856 . + . ID=g9139.t1.exon3;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . CDS 11650 11856 . + 0 ID=cds.g9139.t1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . exon 12310 14056 . + . ID=g9139.t1.exon4;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . CDS 12310 13986 . + 0 ID=cds.g9139.t1;Parent=g9139.t1 NODE_621_length_20076_cov_41.4679 . three_prime_UTR 13987 14056 . + . ID=g9139.t1.utr3p1;Parent=g9139.t1 #PROT g9139.t1 g9139 MAALVSVPPAVVTDTTRLFNAFRERGKGYAVFCDAWRALNFSMIHYAGRDEQERTEALEEFVAHGAAQLSASHSMERRVFAIYFVYALYTSQPLRQVTTRIRLTQVLWHDLRLLIDALHRDGCHDALKIVERLCAARAFQFVATMQTMQPPLQREESALVPGAVKKPSMAPVFQEFGNVSSIDLSVDSATLEDLKAVSEAYYASKCRISALNLEGACVSLCRLGQPSADEDDAPDVSVSIASPAVPMRSLNIAARDVSEDLGTIAADLVNAQQERMRAVGTRVTLGSGPRIGLAGSQSASPRTPADSINAHRLQLRRQSFHSQMGSPQSSPWVNPHNAGGRQGGASARKGSAIEQRQHISQGARSRAQGGGAASSHTGQSAAGVGRGGGSGVATPRRMLHVPSLDDGPSLFGDDDGFAHAEAGVDARAHADDGSEGADGVPLPPPTAKAKARSRSKARTRRKSGSAETPAADTPLQKGPSNGSQGGKQKKRPAKHASDASTKPTNDGKTKTRKRRRKPHGDDVDVDAGLDVDAGLDGSVGGDVATAVPKKAKRRRTTKHMSAADDSLADRQSGGTPSQKAKKSSKATKTNKRRRSKHADGGEDASGCAVPPRKTKRRRVDDAVTDDHVNLADPHDAAPDEQQSSTSTKKKTAKSAESATIRKRKRSKKDHVADGDTAKSKGGKAKANASARDHAGDHGEVEAAAAAVSPRVSARGRTLRSTERYA* # PASA_UPDATE: g2920.t1, single gene model update, valid-1, status:[pasa:asmbl_282,status:12], valid-1 NODE_10755_length_300_cov_35.04_potentialcontaminant . gene 1 300 . + . ID=g2920;Name=g2920.t1 NODE_10755_length_300_cov_35.04_potentialcontaminant . mRNA 1 300 . + . ID=g2920.t1;Parent=g2920;Name=g2920.t1 NODE_10755_length_300_cov_35.04_potentialcontaminant . exon 1 300 . + . ID=g2920.t1.exon1;Parent=g2920.t1 NODE_10755_length_300_cov_35.04_potentialcontaminant . CDS 1 300 . + 0 ID=cds.g2920.t1;Parent=g2920.t1;5_prime_partial=true;3_prime_partial=true #PROT g2920.t1 g2920 TQLPDFQGLHGLRALGGALVVFDNNQLQSLRGIEGLRGAIGGFAAGRNPVLSSLGTIGGSRLLDAGGVRALNSAAARVFADKALMAALGANYHVNGTFNA # ORIGINAL: g2220.t1 original gene structure, not modified by PASA NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS gene 3196 4714 . - . ID=g2220;Name=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS mRNA 3196 4714 . - . ID=g2220.t1;Parent=g2220;Name=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS exon 4601 4714 . - . ID=g2220.t1.exon1;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS CDS 4601 4714 . - 0 ID=cds.g2220.t1;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS exon 4184 4329 . - . ID=g2220.t1.exon2;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS CDS 4184 4329 . - 0 ID=cds.g2220.t1;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS exon 3866 4022 . - . ID=g2220.t1.exon3;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS CDS 3866 4022 . - 1 ID=cds.g2220.t1;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS exon 3196 3441 . - . ID=g2220.t1.exon4;Parent=g2220.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant AUGUSTUS CDS 3196 3441 . - 0 ID=cds.g2220.t1;Parent=g2220.t1 #PROT g2220.t1 g2220 MSRVYGPGRHNLEDDLRDHWTSEGNSRERIAMINHLFTLAHRVGCRVTLLSGDVHVGGRGIIRKRRGHARNYSIINQLVSSGICALGPPTLLNRLAEQEWKEHGIRNIMLGFEEKDRKYCRYIFARNYLTLLPEVTVGQGSVVTYAARWYVEGETSEPYTKRIHPPGSWHSSAREFDQAEGYSTAGFMQRCCFACLGGSSGGGKVGPQDNACGGSQTGLN* # PASA_UPDATE: g2219.t1, single gene model update, valid-1, status:[pasa:asmbl_5179,status:12], valid-1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . gene 117 2263 . + . ID=g2219;Name=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . mRNA 117 2263 . + . ID=g2219.t1;Parent=g2219;Name=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . five_prime_UTR 117 169 . + . ID=g2219.t1.utr5p1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 117 280 . + . ID=g2219.t1.exon1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 170 280 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 429 476 . + . ID=g2219.t1.exon2;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 429 476 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 805 879 . + . ID=g2219.t1.exon3;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 805 879 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 1101 1187 . + . ID=g2219.t1.exon4;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 1101 1187 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 1628 1732 . + . ID=g2219.t1.exon5;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 1628 1732 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . exon 1949 2263 . + . ID=g2219.t1.exon6;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . CDS 1949 2041 . + 0 ID=cds.g2219.t1;Parent=g2219.t1 NODE_2882_length_4852_cov_38.0237_potentialcontaminant . three_prime_UTR 2042 2263 . + . ID=g2219.t1.utr3p1;Parent=g2219.t1 #PROT g2219.t1 g2219 MLRNSAGSITKMSKTLFDFVVKDSKGNDFPLSQFKDKVVLVVNTASNCGFTPQYTGLEELYQKYKEKGFVVLGFPCNQFGGQEPGDDNDIQHFVCERVKVTFPVLAKVDVNGSGEHEVFHFLKNHKNGGGWFGDGIKWNFTKFLIGRDGAPVTRYAPTTKPDSIEKDIISHL* # PASA_UPDATE: g8706.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9567,status:3], valid-1 # PASA_UPDATE: g8706.t1, single gene model update, valid-1, status:[pasa:asmbl_9564,status:3], valid-1 # PASA_UPDATE: g8706.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9563,status:3], valid-1 # PASA_UPDATE: g8706.t1.3.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9566,status:3], valid-1 # PASA_UPDATE: g8706.t1.4.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9565,status:3], valid-1 NODE_826_length_17262_cov_41.8438 . gene 11555 15843 . + . ID=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . mRNA 11555 15843 . + . ID=g8706.t1.1.5b6be70c;Parent=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11555 11661 . + . ID=g8706.t1.1.5b6be70c.utr5p1;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11752 11882 . + . ID=g8706.t1.1.5b6be70c.utr5p2;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11990 12047 . + . ID=g8706.t1.1.5b6be70c.utr5p3;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11555 11661 . + . ID=g8706.t1.1.5b6be70c.exon1;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11752 11882 . + . ID=g8706.t1.1.5b6be70c.exon2;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11990 12192 . + . ID=g8706.t1.1.5b6be70c.exon3;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12048 12192 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12401 12444 . + . ID=g8706.t1.1.5b6be70c.exon4;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12401 12444 . + 2 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12601 12711 . + . ID=g8706.t1.1.5b6be70c.exon5;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12601 12711 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12924 13085 . + . ID=g8706.t1.1.5b6be70c.exon6;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12924 13085 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13447 13550 . + . ID=g8706.t1.1.5b6be70c.exon7;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13447 13550 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13722 13813 . + . ID=g8706.t1.1.5b6be70c.exon8;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13722 13813 . + 1 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14033 14163 . + . ID=g8706.t1.1.5b6be70c.exon9;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14033 14163 . + 2 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14418 14486 . + . ID=g8706.t1.1.5b6be70c.exon10;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14418 14486 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14653 14859 . + . ID=g8706.t1.1.5b6be70c.exon11;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14653 14859 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15122 15274 . + . ID=g8706.t1.1.5b6be70c.exon12;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15122 15274 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15599 15843 . + . ID=g8706.t1.1.5b6be70c.exon13;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15599 15646 . + 0 ID=cds.g8706.t1.1.5b6be70c;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . three_prime_UTR 15647 15843 . + . ID=g8706.t1.1.5b6be70c.utr3p1;Parent=g8706.t1.1.5b6be70c NODE_826_length_17262_cov_41.8438 . mRNA 11555 15843 . + . ID=g8706.t1;Parent=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11555 11661 . + . ID=g8706.t1.utr5p1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11767 11862 . + . ID=g8706.t1.utr5p2;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11990 12047 . + . ID=g8706.t1.utr5p3;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 11555 11661 . + . ID=g8706.t1.exon1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 11767 11862 . + . ID=g8706.t1.exon2;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 11990 12192 . + . ID=g8706.t1.exon3;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 12048 12192 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 12401 12444 . + . ID=g8706.t1.exon4;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 12401 12444 . + 2 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 12601 12711 . + . ID=g8706.t1.exon5;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 12601 12711 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 12924 13085 . + . ID=g8706.t1.exon6;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 12924 13085 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 13447 13550 . + . ID=g8706.t1.exon7;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 13447 13550 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 13722 13813 . + . ID=g8706.t1.exon8;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 13722 13813 . + 1 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 14033 14163 . + . ID=g8706.t1.exon9;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 14033 14163 . + 2 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 14418 14486 . + . ID=g8706.t1.exon10;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 14418 14486 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 14653 14859 . + . ID=g8706.t1.exon11;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 14653 14859 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 15122 15274 . + . ID=g8706.t1.exon12;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 15122 15274 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . exon 15599 15843 . + . ID=g8706.t1.exon13;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . CDS 15599 15646 . + 0 ID=cds.g8706.t1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . three_prime_UTR 15647 15843 . + . ID=g8706.t1.utr3p1;Parent=g8706.t1 NODE_826_length_17262_cov_41.8438 . mRNA 11555 15843 . + . ID=g8706.t1.2.5b6be70c;Parent=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11555 11661 . + . ID=g8706.t1.2.5b6be70c.utr5p1;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11752 11862 . + . ID=g8706.t1.2.5b6be70c.utr5p2;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . five_prime_UTR 12061 12065 . + . ID=g8706.t1.2.5b6be70c.utr5p3;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11555 11661 . + . ID=g8706.t1.2.5b6be70c.exon1;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11752 11862 . + . ID=g8706.t1.2.5b6be70c.exon2;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12061 12192 . + . ID=g8706.t1.2.5b6be70c.exon3;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12066 12192 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12401 12444 . + . ID=g8706.t1.2.5b6be70c.exon4;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12401 12444 . + 2 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12601 12711 . + . ID=g8706.t1.2.5b6be70c.exon5;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12601 12711 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12924 13085 . + . ID=g8706.t1.2.5b6be70c.exon6;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12924 13085 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13447 13550 . + . ID=g8706.t1.2.5b6be70c.exon7;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13447 13550 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13722 13813 . + . ID=g8706.t1.2.5b6be70c.exon8;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13722 13813 . + 1 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14033 14163 . + . ID=g8706.t1.2.5b6be70c.exon9;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14033 14163 . + 2 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14418 14486 . + . ID=g8706.t1.2.5b6be70c.exon10;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14418 14486 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14653 14859 . + . ID=g8706.t1.2.5b6be70c.exon11;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14653 14859 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15122 15274 . + . ID=g8706.t1.2.5b6be70c.exon12;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15122 15274 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15599 15843 . + . ID=g8706.t1.2.5b6be70c.exon13;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15599 15646 . + 0 ID=cds.g8706.t1.2.5b6be70c;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . three_prime_UTR 15647 15843 . + . ID=g8706.t1.2.5b6be70c.utr3p1;Parent=g8706.t1.2.5b6be70c NODE_826_length_17262_cov_41.8438 . mRNA 11555 15843 . + . ID=g8706.t1.3.5b6be70c;Parent=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11555 11862 . + . ID=g8706.t1.3.5b6be70c.utr5p1;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11990 12047 . + . ID=g8706.t1.3.5b6be70c.utr5p2;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11555 11862 . + . ID=g8706.t1.3.5b6be70c.exon1;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11990 12192 . + . ID=g8706.t1.3.5b6be70c.exon2;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12048 12192 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12401 12444 . + . ID=g8706.t1.3.5b6be70c.exon3;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12401 12444 . + 2 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12601 12711 . + . ID=g8706.t1.3.5b6be70c.exon4;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12601 12711 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12924 13085 . + . ID=g8706.t1.3.5b6be70c.exon5;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12924 13085 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13447 13550 . + . ID=g8706.t1.3.5b6be70c.exon6;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13447 13550 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13722 13813 . + . ID=g8706.t1.3.5b6be70c.exon7;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13722 13813 . + 1 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14033 14163 . + . ID=g8706.t1.3.5b6be70c.exon8;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14033 14163 . + 2 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14418 14486 . + . ID=g8706.t1.3.5b6be70c.exon9;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14418 14486 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14653 14859 . + . ID=g8706.t1.3.5b6be70c.exon10;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14653 14859 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15122 15274 . + . ID=g8706.t1.3.5b6be70c.exon11;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15122 15274 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15599 15843 . + . ID=g8706.t1.3.5b6be70c.exon12;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15599 15646 . + 0 ID=cds.g8706.t1.3.5b6be70c;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . three_prime_UTR 15647 15843 . + . ID=g8706.t1.3.5b6be70c.utr3p1;Parent=g8706.t1.3.5b6be70c NODE_826_length_17262_cov_41.8438 . mRNA 11555 15843 . + . ID=g8706.t1.4.5b6be70c;Parent=g8706;Name=g8706.t1 NODE_826_length_17262_cov_41.8438 . five_prime_UTR 11555 12047 . + . ID=g8706.t1.4.5b6be70c.utr5p1;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 11555 12192 . + . ID=g8706.t1.4.5b6be70c.exon1;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12048 12192 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12401 12444 . + . ID=g8706.t1.4.5b6be70c.exon2;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12401 12444 . + 2 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12601 12711 . + . ID=g8706.t1.4.5b6be70c.exon3;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12601 12711 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 12924 13085 . + . ID=g8706.t1.4.5b6be70c.exon4;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 12924 13085 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13447 13550 . + . ID=g8706.t1.4.5b6be70c.exon5;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13447 13550 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 13722 13813 . + . ID=g8706.t1.4.5b6be70c.exon6;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 13722 13813 . + 1 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14033 14163 . + . ID=g8706.t1.4.5b6be70c.exon7;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14033 14163 . + 2 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14418 14486 . + . ID=g8706.t1.4.5b6be70c.exon8;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14418 14486 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 14653 14859 . + . ID=g8706.t1.4.5b6be70c.exon9;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 14653 14859 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15122 15274 . + . ID=g8706.t1.4.5b6be70c.exon10;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15122 15274 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . exon 15599 15843 . + . ID=g8706.t1.4.5b6be70c.exon11;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . CDS 15599 15646 . + 0 ID=cds.g8706.t1.4.5b6be70c;Parent=g8706.t1.4.5b6be70c NODE_826_length_17262_cov_41.8438 . three_prime_UTR 15647 15843 . + . ID=g8706.t1.4.5b6be70c.utr3p1;Parent=g8706.t1.4.5b6be70c #PROT g8706.t1.1.5b6be70c g8706 MDAADAMYPCLDADLAEATASNRAVLDLHQMDSSKNDMHIVISSPEKHGDGLDSYVTYCVTTKTTREGYHAREFFVRRRYGDFAWLRRKLEEEAPECIIPSLPEKHALKRLERFTPEFLERRRQGLEKFLIRVTEHLVLSNSPSFKLFLEAKNWELTTAQSKSMGFVDAVGETIWSLAPKATLKQPDPKFTELNSYAATMAKCLADLDAATAKIIKARQDVAADLSEYGPVFHLMSNAEMELCRAFTALGHGMDRLSSAHKAWAQSIDESLGVPVNEYVLYAESVKDTLARRDNVHAEAETMRDELERTRNEKKNAESGGPDRSTYLSSFTSMIYAETPQQRTERITKLDKAIWQLEHKVQKAEEDLGKTNAIVSAEFDRWNGRKREELKTMLKSFTKGEIDYYKKCIAIWEEVIPTIDSL* #PROT g8706.t1 g8706 MDAADAMYPCLDADLAEATASNRAVLDLHQMDSSKNDMHIVISSPEKHGDGLDSYVTYCVTTKTTREGYHAREFFVRRRYGDFAWLRRKLEEEAPECIIPSLPEKHALKRLERFTPEFLERRRQGLEKFLIRVTEHLVLSNSPSFKLFLEAKNWELTTAQSKSMGFVDAVGETIWSLAPKATLKQPDPKFTELNSYAATMAKCLADLDAATAKIIKARQDVAADLSEYGPVFHLMSNAEMELCRAFTALGHGMDRLSSAHKAWAQSIDESLGVPVNEYVLYAESVKDTLARRDNVHAEAETMRDELERTRNEKKNAESGGPDRSTYLSSFTSMIYAETPQQRTERITKLDKAIWQLEHKVQKAEEDLGKTNAIVSAEFDRWNGRKREELKTMLKSFTKGEIDYYKKCIAIWEEVIPTIDSL* #PROT g8706.t1.2.5b6be70c g8706 MYPCLDADLAEATASNRAVLDLHQMDSSKNDMHIVISSPEKHGDGLDSYVTYCVTTKTTREGYHAREFFVRRRYGDFAWLRRKLEEEAPECIIPSLPEKHALKRLERFTPEFLERRRQGLEKFLIRVTEHLVLSNSPSFKLFLEAKNWELTTAQSKSMGFVDAVGETIWSLAPKATLKQPDPKFTELNSYAATMAKCLADLDAATAKIIKARQDVAADLSEYGPVFHLMSNAEMELCRAFTALGHGMDRLSSAHKAWAQSIDESLGVPVNEYVLYAESVKDTLARRDNVHAEAETMRDELERTRNEKKNAESGGPDRSTYLSSFTSMIYAETPQQRTERITKLDKAIWQLEHKVQKAEEDLGKTNAIVSAEFDRWNGRKREELKTMLKSFTKGEIDYYKKCIAIWEEVIPTIDSL* #PROT g8706.t1.3.5b6be70c g8706 MDAADAMYPCLDADLAEATASNRAVLDLHQMDSSKNDMHIVISSPEKHGDGLDSYVTYCVTTKTTREGYHAREFFVRRRYGDFAWLRRKLEEEAPECIIPSLPEKHALKRLERFTPEFLERRRQGLEKFLIRVTEHLVLSNSPSFKLFLEAKNWELTTAQSKSMGFVDAVGETIWSLAPKATLKQPDPKFTELNSYAATMAKCLADLDAATAKIIKARQDVAADLSEYGPVFHLMSNAEMELCRAFTALGHGMDRLSSAHKAWAQSIDESLGVPVNEYVLYAESVKDTLARRDNVHAEAETMRDELERTRNEKKNAESGGPDRSTYLSSFTSMIYAETPQQRTERITKLDKAIWQLEHKVQKAEEDLGKTNAIVSAEFDRWNGRKREELKTMLKSFTKGEIDYYKKCIAIWEEVIPTIDSL* #PROT g8706.t1.4.5b6be70c g8706 MDAADAMYPCLDADLAEATASNRAVLDLHQMDSSKNDMHIVISSPEKHGDGLDSYVTYCVTTKTTREGYHAREFFVRRRYGDFAWLRRKLEEEAPECIIPSLPEKHALKRLERFTPEFLERRRQGLEKFLIRVTEHLVLSNSPSFKLFLEAKNWELTTAQSKSMGFVDAVGETIWSLAPKATLKQPDPKFTELNSYAATMAKCLADLDAATAKIIKARQDVAADLSEYGPVFHLMSNAEMELCRAFTALGHGMDRLSSAHKAWAQSIDESLGVPVNEYVLYAESVKDTLARRDNVHAEAETMRDELERTRNEKKNAESGGPDRSTYLSSFTSMIYAETPQQRTERITKLDKAIWQLEHKVQKAEEDLGKTNAIVSAEFDRWNGRKREELKTMLKSFTKGEIDYYKKCIAIWEEVIPTIDSL* # PASA_UPDATE: g8704.t1, single gene model update, valid-1, status:[pasa:asmbl_9562,status:12], valid-1 NODE_826_length_17262_cov_41.8438 . gene 417 4267 . + . ID=g8704;Name=g8704.t1 NODE_826_length_17262_cov_41.8438 . mRNA 417 4267 . + . ID=g8704.t1;Parent=g8704;Name=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 417 527 . + . ID=g8704.t1.exon1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 417 527 . + 0 ID=cds.g8704.t1;Parent=g8704.t1;5_prime_partial=true NODE_826_length_17262_cov_41.8438 . exon 745 897 . + . ID=g8704.t1.exon2;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 745 897 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 1216 1335 . + . ID=g8704.t1.exon3;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 1216 1335 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 1569 1784 . + . ID=g8704.t1.exon4;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 1569 1784 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 1975 2061 . + . ID=g8704.t1.exon5;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 1975 2061 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 2247 2335 . + . ID=g8704.t1.exon6;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 2247 2335 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 2567 2672 . + . ID=g8704.t1.exon7;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 2567 2672 . + 1 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 2928 3191 . + . ID=g8704.t1.exon8;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 2928 3191 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . exon 3479 4267 . + . ID=g8704.t1.exon9;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . CDS 3479 3814 . + 0 ID=cds.g8704.t1;Parent=g8704.t1 NODE_826_length_17262_cov_41.8438 . three_prime_UTR 3815 4267 . + . ID=g8704.t1.utr3p1;Parent=g8704.t1 #PROT g8704.t1 g8704 DFTIVENNADEKNCKDRLPPSVAAPPTVVDLQSRNATLSWPKLDNAHGLIIAYEAVATEVHGGNVTNHAYMNYTLPSPFNKTFTHTVTGLRPYTLYRFAIAAFDIAGSTIGNDTDALMTLEDAPEDVQVPTIARIFSRMANVTWGAPLRPNGVIRGYSVGVTAADPWNPSVIRRLQFDTGANDMMLQIDGLFPDTDYQVVLTAWTAVGNTSSLPAFFTTRPGTPDYHENCIRFQLQGLYTAVVKWDGCFRANDRQGLSRYEVHLNGTLVYKGVLSEFLADELVRPGEPQAFIVTAFNRVSFTQSDPAILLTPPSPPTDVPRPTVTVHNETALLVTWLSPVHPNGIVTLYELSVDGTVVCAGMIRSCIVGGLASKQTYTFVVSVHNLIGSATSAALVATMPTGGFLGSGISGGAIAGIILGIVGFMVSVFVVFVWRKRREHRLALEAYKRSRKERARQKRERQVESVEMDGRGVHAHTDEANMEYDADDTRGVL* # ORIGINAL: g8705.t1 original gene structure, not modified by PASA NODE_826_length_17262_cov_41.8438 AUGUSTUS gene 5005 10819 . - . ID=g8705;Name=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS mRNA 5005 10819 . - . ID=g8705.t1;Parent=g8705;Name=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 9901 10819 . - . ID=g8705.t1.exon1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 9901 10819 . - 0 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 9548 9719 . - . ID=g8705.t1.exon2;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 9548 9719 . - 2 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 8429 9356 . - . ID=g8705.t1.exon3;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 8429 9356 . - 1 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 8032 8213 . - . ID=g8705.t1.exon4;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 8032 8213 . - 0 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 6355 7894 . - . ID=g8705.t1.exon5;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 6355 7894 . - 1 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 6001 6089 . - . ID=g8705.t1.exon6;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 6001 6089 . - 0 ID=cds.g8705.t1;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 5005 5662 . - . ID=g8705.t1.exon7;Parent=g8705.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 5005 5662 . - 1 ID=cds.g8705.t1;Parent=g8705.t1 #PROT g8705.t1 g8705 MSAGRRQSYEFAIEAAAIQTLSTIDAPAPVTVPDEEDAAGGRRSFFKRMKSRRGSRMGRSRSRTRVVQADGKHTDAKTSERPSRDLGVGLPRNIIERVFFSWVVPAIRQAGSKGDESITQDDVFALDKYCEAGASADHVEGELREASKAGRSPSLGRVLAFHLNEHGTGWGWFPIALCVGIFRVACLLAQPVILEQILSIIDDKSKDAATGYGLIGILCAVVLVGTMADHQQAWVSQRASVRIRAALFSLIYRKSLRLRASATAGAAMSVMSVDAESIKAFFEILVPLLLGPVELIAILILMYRLLGLAMLVAVAVMFTSVMLSMSMAKRLVAIGKLKAKYTSERVKLVSEIVNGIRAIKFYGWEAQFISRIESVRQMEAKYIRGFSRASIALMGMVLSTPQLLTGAVFIIFSVISSDGLSLSIVFPALIYLNNVRMLIHVFPEHQSKFVAARLSFGKLAEFLFSQEEMPSLSDPTKRLQPHTGEHTTSPHTSSTAGKTAEKGAPVDPLDPQDEVEDPSSHFLCVDATDQTPHTTAVTSVTATPTDKALCDSESPVEMVEVDVGGEAVHDRVAPVALRPLSPEDLEVGEIRVENARFEWPSASASALSGVDGTSGMPFTLGTVDVRIRPGELVAVVGSVGCGKSSLAMALLGEMPIVQGRVTAKGRRAFVPQQAWIMNATLRTNVTFGRSFDPRAFAEALDACAMEHDLKLLQKGDMTWIGDRGINLSGGQKQRVSIARSLYSEANIVVMDDPLSAVDSHVSEHIFHKCIRGAMAGRTRLFVTNQVQYLPFCDRVIVIENGVIAACGTASEIGAHLERFGVLAESAPRNVDDCTEDDVDVVTPAATTEAVTAAEDMKTDDVAPSSAHGAGVSGGVSGGVSSEPALPSAVVAVVDEAEDDGAWQKRSSFWSTFVYAMGGPWMLALVAFVQGWATVLSVVINGVLSFWSTRTFDLTNHQYMGLLAGVSGLYVVFVFTRSVGFSAAARRTGTDLHTRLLRRVLRAPMSFFDTTPAGHIIGWLSADIGGIDTRQHPSAEMASILTCATALYLVLMVVILPWMLAGVVPLVVVYVALARFYRPGVTAMKRLEASTNPPIFAQFKETLEGLATIRAYGLRDAFSKGNERRVDGNNRSAYCLHATEHWFAFAIDLCGALVLLGTALVAVAQRGDTKSSLSALSIFFAVSLSVMINMMTRQQTEQLRLLNTIESLRVRTRMPVEAAPIIEGNRPAEHWPNKGHISIRNIMMRYRKGDRAVLDNVTCDIHPCEKIGIVGRTGSGKSSLVSALFRLVELECGSITVDGVNIADIGLDDLRSRFAIITQDPVLFSGSVKTNLDPFNVSSDEEMWEALELSHLAATVRTLPGGLDATVSENGENFSAGTRQQFSLARALLRRPRVLVLDEATSSIDNGTDALIQAALRRACKDATVLTIAHRLNTVMDSDKILVLSAGNIVEFDHPHTLLQHKTSAFAQMVAATGPANSELLRNMARDAWVARKGNQ* # ORIGINAL: g8707.t1 original gene structure, not modified by PASA NODE_826_length_17262_cov_41.8438 AUGUSTUS gene 16260 16583 . - . ID=g8707;Name=g8707.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS mRNA 16260 16583 . - . ID=g8707.t1;Parent=g8707;Name=g8707.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS exon 16260 16583 . - . ID=g8707.t1.exon1;Parent=g8707.t1 NODE_826_length_17262_cov_41.8438 AUGUSTUS CDS 16260 16583 . - 0 ID=cds.g8707.t1;Parent=g8707.t1 #PROT g8707.t1 g8707 MHLPERWGYLQFSELAAGTDSPTPDPRWGARRALAQMYNSLKMFYVVNGYYTRDLELLHLPRWVVRGDCASVPSIVLPTLYSFVVTVVSHADGSVGHVTDDRETYFE* # PASA_UPDATE: g3073.t1, single gene model update, valid-1, status:[pasa:asmbl_9044,status:12], valid-1 NODE_7209_length_459_cov_37.6198_potentialcontaminant . gene 2 459 . + . ID=g3073;Name=g3073.t1 NODE_7209_length_459_cov_37.6198_potentialcontaminant . mRNA 2 459 . + . ID=g3073.t1;Parent=g3073;Name=g3073.t1 NODE_7209_length_459_cov_37.6198_potentialcontaminant . five_prime_UTR 2 2 . + . ID=g3073.t1.utr5p1;Parent=g3073.t1 NODE_7209_length_459_cov_37.6198_potentialcontaminant . exon 2 459 . + . ID=g3073.t1.exon1;Parent=g3073.t1 NODE_7209_length_459_cov_37.6198_potentialcontaminant . CDS 3 459 . + 0 ID=cds.g3073.t1;Parent=g3073.t1;5_prime_partial=true;3_prime_partial=true #PROT g3073.t1 g3073 QLPPSECNKISDANKKVVSSRHDDDTASSSQQRHSFSQLLNMTTSQLEGTFGSFDASAFIVKSQSQLQFSQEFDIVKVHDTEKRTSPRRDEEPASLPQLTFSQVERWFTITPSQLNAAGRSPTQDALCFLKSLSQEQHYSQDSDATVMPPCT # PASA_UPDATE: g5444.t1, single gene model update, valid-1, status:[pasa:asmbl_2535,status:12], valid-1 NODE_1757_length_9360_cov_38.1418 . gene 6051 9137 . + . ID=g5444;Name=g5444.t1 NODE_1757_length_9360_cov_38.1418 . mRNA 6051 9137 . + . ID=g5444.t1;Parent=g5444;Name=g5444.t1 NODE_1757_length_9360_cov_38.1418 . five_prime_UTR 6051 6358 . + . ID=g5444.t1.utr5p1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 6051 6412 . + . ID=g5444.t1.exon1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 6359 6412 . + 0 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 6571 6652 . + . ID=g5444.t1.exon2;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 6571 6652 . + 0 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 6851 6936 . + . ID=g5444.t1.exon3;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 6851 6936 . + 2 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 7084 7144 . + . ID=g5444.t1.exon4;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 7084 7144 . + 0 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 7376 7419 . + . ID=g5444.t1.exon5;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 7376 7419 . + 2 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 7645 7974 . + . ID=g5444.t1.exon6;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 7645 7974 . + 0 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 8218 8533 . + . ID=g5444.t1.exon7;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 8218 8533 . + 0 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 8827 8925 . + . ID=g5444.t1.exon8;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 8827 8925 . + 2 ID=cds.g5444.t1;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . exon 9068 9137 . + . ID=g5444.t1.exon9;Parent=g5444.t1 NODE_1757_length_9360_cov_38.1418 . CDS 9068 9137 . + 2 ID=cds.g5444.t1;Parent=g5444.t1;3_prime_partial=true #PROT g5444.t1 g5444 MHVVVFVPWPRPQVAGGQPVWTDERDHRLWQLLSASPGATDGETDWDAIATSLGVTPEECVERSGYLYQQRLRQVHSKLRHRGATGPADVTRRNVTSAPPVFENSLELERRQDDMRSLNSGGIAYASAIGSQPQLPGQLGQSRQSGDRSMLPLPHPSQPLDNPPQSSQSSSGVMQPYAHVTAQVQLEHQAGAVSASAQSHVPLDAAGTQRHVTASSAAQALIDEGSNMHGGAIDSPHRIHRKPPAMSIADSSVQAQAAGACAQEAQAAPPDTSDYERNRGNRTPPIVGVVVEDPLCPPTPTVKANSDPAAAAMFSAGRVLPPLEEPSMAAPHPRDHGDRSAGDTEAPDAVVDQSFLSDSSITRSALEDALLAFSGSAGSV # ORIGINAL: g5442.t1 original gene structure, not modified by PASA NODE_1757_length_9360_cov_38.1418 AUGUSTUS gene 78 576 . + . ID=g5442;Name=g5442.t1 NODE_1757_length_9360_cov_38.1418 AUGUSTUS mRNA 78 576 . + . ID=g5442.t1;Parent=g5442;Name=g5442.t1 NODE_1757_length_9360_cov_38.1418 AUGUSTUS exon 78 136 . + . ID=g5442.t1.exon1;Parent=g5442.t1 NODE_1757_length_9360_cov_38.1418 AUGUSTUS CDS 78 136 . + 0 ID=cds.g5442.t1;Parent=g5442.t1 NODE_1757_length_9360_cov_38.1418 AUGUSTUS exon 270 576 . + . ID=g5442.t1.exon2;Parent=g5442.t1 NODE_1757_length_9360_cov_38.1418 AUGUSTUS CDS 270 576 . + 1 ID=cds.g5442.t1;Parent=g5442.t1 #PROT g5442.t1 g5442 FFCDPEAAHIVLSSCDALHRGRYFLRAVCAAYVDWSRPQFDGTSHHHAFLPCDAYAVAAAIVPGIVKGTTDLYGQIELAGTLTRGMCVWDWYNRRPHKPNATVVTAIDRDAFVACLKHTFA* # PASA_UPDATE: novel_model_9_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_2537,status:3], valid-1 NODE_1757_length_9360_cov_38.1418 . gene 3685 5787 . - . ID=novel_gene_9_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1757_length_9360_cov_38.1418 . mRNA 3685 5787 . - . ID=novel_model_9_5b6be656;Parent=novel_gene_9_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1757_length_9360_cov_38.1418 . five_prime_UTR 5618 5787 . - . ID=novel_model_9_5b6be656.utr5p1;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 5570 5787 . - . ID=novel_model_9_5b6be656.exon1;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 5570 5617 . - 0 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 5231 5299 . - . ID=novel_model_9_5b6be656.exon2;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 5231 5299 . - 0 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 4750 4865 . - . ID=novel_model_9_5b6be656.exon3;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 4750 4865 . - 0 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 4382 4496 . - . ID=novel_model_9_5b6be656.exon4;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 4382 4496 . - 1 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 3990 4092 . - . ID=novel_model_9_5b6be656.exon5;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 3990 4092 . - 0 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . exon 3685 3805 . - . ID=novel_model_9_5b6be656.exon6;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . CDS 3711 3805 . - 2 ID=cds.novel_model_9_5b6be656;Parent=novel_model_9_5b6be656 NODE_1757_length_9360_cov_38.1418 . three_prime_UTR 3685 3710 . - . ID=novel_model_9_5b6be656.utr3p1;Parent=novel_model_9_5b6be656 #PROT novel_model_9_5b6be656 novel_gene_9_5b6be656 MEVQEATYDPAEFIETNARNIVSRKTVLCGSQNIVLSGKTIVHADVIVRGDLAPVRIGQFCNISKGAVLRPSFKRFKSGYAFLPLQVGDYVVIGEGSVVNAASIGSCVQIGRNSVIGRRCIVRDCCRIEDGAVLAADTVFPAFSIVAGNPAVIVGELPETAHVTGEALARDLFAGFKPVAR* # PASA_UPDATE: g5443.t1, single gene model update, valid-1, status:[pasa:asmbl_2536,status:3], valid-1 NODE_1757_length_9360_cov_38.1418 . gene 1090 3144 . - . ID=g5443;Name=g5443.t1 NODE_1757_length_9360_cov_38.1418 . mRNA 1090 3144 . - . ID=g5443.t1;Parent=g5443;Name=g5443.t1 NODE_1757_length_9360_cov_38.1418 . five_prime_UTR 3120 3144 . - . ID=g5443.t1.utr5p1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . exon 2912 3144 . - . ID=g5443.t1.exon1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . CDS 2912 3119 . - 0 ID=cds.g5443.t1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . exon 2765 2803 . - . ID=g5443.t1.exon2;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . CDS 2765 2803 . - 2 ID=cds.g5443.t1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . exon 2449 2601 . - . ID=g5443.t1.exon3;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . CDS 2449 2601 . - 2 ID=cds.g5443.t1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . exon 1935 2050 . - . ID=g5443.t1.exon4;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . CDS 1935 2050 . - 2 ID=cds.g5443.t1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . exon 1090 1715 . - . ID=g5443.t1.exon5;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . CDS 1233 1715 . - 0 ID=cds.g5443.t1;Parent=g5443.t1 NODE_1757_length_9360_cov_38.1418 . three_prime_UTR 1090 1232 . - . ID=g5443.t1.utr3p1;Parent=g5443.t1 #PROT g5443.t1 g5443 MRIACRLAVPSFTRMLLQRQVVSLAALSLLCAVRCARGIATTHALRSRTENCILKGAHFSTFKPRSDVRVGKMEVHIVPLLQDNYGYVLVDVASRDAFVVDPVEPPKVLAATAALGVSVRGILTTHHHWDHAGGNEQLVKDLASAGMPVDVYGGDDRIPALTRQVKHGDTFELGALSITALDTSCHTSASISYHVTHGASEASAGVVFTGDTLFVGGCGRFFEGTPAQMHRALCEVLAALPDATRVYPGHEYTVKNLQFAATIEPANRDIVEGLAAMVEKRSRGEPTVPSTIAQEKKWNVFVRCGEPSVKAAVGVSDAIDSMAALRKAKDKF* # ORIGINAL: g2923.t1 original gene structure, not modified by PASA NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS gene 234 927 . - . ID=g2923;Name=g2923.t1 NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS mRNA 234 927 . - . ID=g2923.t1;Parent=g2923;Name=g2923.t1 NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS exon 405 927 . - . ID=g2923.t1.exon1;Parent=g2923.t1 NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS CDS 405 927 . - 0 ID=cds.g2923.t1;Parent=g2923.t1 NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS exon 234 256 . - . ID=g2923.t1.exon2;Parent=g2923.t1 NODE_4885_length_1163_cov_33.4421_potentialcontaminant AUGUSTUS CDS 234 256 . - 2 ID=cds.g2923.t1;Parent=g2923.t1 #PROT g2923.t1 g2923 MRSVPNVQGFRPLRGVSIEAWVMFTSIDSDQSVWSVTAAGPSDFPTTMTMTTRTTDQKVYFCVQLNSTVSITAVTPIEANHTYHTVVSMSFLTGVVTLFVDGITMEPLVVVSNTNTNNNINPDKVILPTNYASITIGNVLKSMIVDEFAVYSDVLPYKYGLAHARCGGGVECLSGLPGAVC* # PASA_UPDATE: g11869.t1, single gene model update, valid-1, status:[pasa:asmbl_7834,status:12], valid-1 NODE_5066_length_1045_cov_30.5866 . gene 1 699 . - . ID=g11869;Name=g11869.t1 NODE_5066_length_1045_cov_30.5866 . mRNA 1 699 . - . ID=g11869.t1;Parent=g11869;Name=g11869.t1 NODE_5066_length_1045_cov_30.5866 . exon 317 699 . - . ID=g11869.t1.exon1;Parent=g11869.t1 NODE_5066_length_1045_cov_30.5866 . CDS 317 699 . - 0 ID=cds.g11869.t1;Parent=g11869.t1 NODE_5066_length_1045_cov_30.5866 . exon 1 55 . - . ID=g11869.t1.exon2;Parent=g11869.t1 NODE_5066_length_1045_cov_30.5866 . CDS 1 55 . - 1 ID=cds.g11869.t1;Parent=g11869.t1;3_prime_partial=true #PROT g11869.t1 g11869 MFYNLAFTSLPPIAFAVLDKDVPATAALAMPQLYAEGLNNLCFNRRAFWIAIADGVYQSLIAFFIPYWAHSAAPDGKTDDIWCLGVTIYSALIVMANARLALEVHNWNSIITGLMLGSVSLWWFYMLAYMNIMPGSNSTFGVVWQL # PASA_UPDATE: g553.t1, single gene model update, valid-1, status:[pasa:asmbl_7062,status:12], valid-1 NODE_4177_length_2068_cov_39.7878 . gene 240 1188 . - . ID=g553;Name=g553.t1 NODE_4177_length_2068_cov_39.7878 . mRNA 240 1188 . - . ID=g553.t1;Parent=g553;Name=g553.t1 NODE_4177_length_2068_cov_39.7878 . five_prime_UTR 1032 1188 . - . ID=g553.t1.utr5p1;Parent=g553.t1 NODE_4177_length_2068_cov_39.7878 . exon 240 1188 . - . ID=g553.t1.exon1;Parent=g553.t1 NODE_4177_length_2068_cov_39.7878 . CDS 240 1031 . - 0 ID=cds.g553.t1;Parent=g553.t1 #PROT g553.t1 g553 MPPGPHTRHVASVSASASEADPLLPSTHSGTAVGQSDAHSEHTHVHTHAEYASVPTVSTAAALRGRFGADYVEECDDWDAADHAPNYTPKSPSLIGCYCNLATATVGAGILSYPAAMSDAGIVPTCILTVAFGVINFLTLVLLTRLAAMYAGSLRVHTYEELVSVILGRRAYCAAVFVILFNTVGALTGFLVVVADLGQPLFEKWITLDDGHSFLSSRAFVVICFAVGIALPLSMMGDMHALAGSSFVAVASVLMVAGAIVFR* # ORIGINAL: g5704.t1 original gene structure, not modified by PASA NODE_3548_length_3232_cov_35.8001 AUGUSTUS gene 272 3149 . + . ID=g5704;Name=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS mRNA 272 3149 . + . ID=g5704.t1;Parent=g5704;Name=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 272 323 . + . ID=g5704.t1.exon1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 272 323 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 513 567 . + . ID=g5704.t1.exon2;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 513 567 . + 2 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 668 731 . + . ID=g5704.t1.exon3;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 668 731 . + 1 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 963 1012 . + . ID=g5704.t1.exon4;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 963 1012 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 1420 1459 . + . ID=g5704.t1.exon5;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 1420 1459 . + 1 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 1628 1680 . + . ID=g5704.t1.exon6;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 1628 1680 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 1839 1912 . + . ID=g5704.t1.exon7;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 1839 1912 . + 1 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 2212 2294 . + . ID=g5704.t1.exon8;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 2212 2294 . + 2 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 2557 2643 . + . ID=g5704.t1.exon9;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 2557 2643 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 2765 2851 . + . ID=g5704.t1.exon10;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 2765 2851 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS exon 3085 3149 . + . ID=g5704.t1.exon11;Parent=g5704.t1 NODE_3548_length_3232_cov_35.8001 AUGUSTUS CDS 3085 3149 . + 0 ID=cds.g5704.t1;Parent=g5704.t1 #PROT g5704.t1 g5704 SKRDGSTPAPAPAAQTKTHKGASGHGDIFSREQEYMKMNAAIEAKTTQLAKQAESIVRGQDEYLSRPITRGETSAPPETDSTNTRKSNVQSPWDTPRTRTLSVARSISPTPSSRTGHDDDSTASGGMGTEATLRFLKAKVKVMQEELDRTTAELQDKDDALLQAEAKVREVTEDRAKLIRTHQQLQINHDKHKKVADDARKTNIALETQISNLRKELDGLQKQQKTTVVDQSSLEV # ORIGINAL: g2251.t1 original gene structure, not modified by PASA NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS gene 103 444 . - . ID=g2251;Name=g2251.t1 NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS mRNA 103 444 . - . ID=g2251.t1;Parent=g2251;Name=g2251.t1 NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS exon 379 444 . - . ID=g2251.t1.exon1;Parent=g2251.t1 NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS CDS 379 444 . - 0 ID=cds.g2251.t1;Parent=g2251.t1 NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS exon 103 173 . - . ID=g2251.t1.exon2;Parent=g2251.t1 NODE_4094_length_2191_cov_35.1366_potentialcontaminant AUGUSTUS CDS 103 173 . - 0 ID=cds.g2251.t1;Parent=g2251.t1 #PROT g2251.t1 g2251 MGDSEYCKHVLLMARYDAWANRKLLDVVRLLTDDQYYGHSGLCFR # ORIGINAL: g5977.t1 original gene structure, not modified by PASA NODE_2219_length_7198_cov_38.6351 AUGUSTUS gene 2535 3495 . - . ID=g5977;Name=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS mRNA 2535 3495 . - . ID=g5977.t1;Parent=g5977;Name=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS exon 3439 3495 . - . ID=g5977.t1.exon1;Parent=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS CDS 3439 3495 . - 0 ID=cds.g5977.t1;Parent=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS exon 2969 3295 . - . ID=g5977.t1.exon2;Parent=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS CDS 2969 3295 . - 0 ID=cds.g5977.t1;Parent=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS exon 2535 2684 . - . ID=g5977.t1.exon3;Parent=g5977.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS CDS 2535 2684 . - 0 ID=cds.g5977.t1;Parent=g5977.t1 #PROT g5977.t1 g5977 MYPRDNFNAVKGAPVFIVFAGCILYTTFLVRVFDRMDDFYESGNRAYIWYYWAINCIQVATAILTIADYPKTASRIAAANIATVFLLFIQTTNMIETFHCREADNVTTSRCAFAITGIVGSILLLVGQIVTIVAFEAVAIERYSASVKPGSDPESALTNYIRTKSTASIASSKCTQE* # PASA_UPDATE: g5976.t1, single gene model update, valid-1, status:[pasa:asmbl_3796,status:13],[pasa:asmbl_3797,status:12], valid-1 NODE_2219_length_7198_cov_38.6351 . gene 362 2124 . + . ID=g5976;Name=g5976.t1 NODE_2219_length_7198_cov_38.6351 . mRNA 362 2124 . + . ID=g5976.t1;Parent=g5976;Name=g5976.t1 NODE_2219_length_7198_cov_38.6351 . exon 362 799 . + . ID=g5976.t1.exon1;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . CDS 362 799 . + 0 ID=cds.g5976.t1;Parent=g5976.t1;5_prime_partial=true NODE_2219_length_7198_cov_38.6351 . exon 1030 1217 . + . ID=g5976.t1.exon2;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . CDS 1030 1217 . + 0 ID=cds.g5976.t1;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . exon 1378 1527 . + . ID=g5976.t1.exon3;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . CDS 1378 1527 . + 1 ID=cds.g5976.t1;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . exon 1691 2124 . + . ID=g5976.t1.exon4;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . CDS 1691 1826 . + 1 ID=cds.g5976.t1;Parent=g5976.t1 NODE_2219_length_7198_cov_38.6351 . three_prime_UTR 1827 2124 . + . ID=g5976.t1.utr3p1;Parent=g5976.t1 #PROT g5976.t1 g5976 GRRIEEEAVRRAERRLELEKKQQQDLRAQIEDLRRREDEQKLVLELQADALREDAEAARAEEMHRAMERREKMEEFRRGLERQTRVQMKRRSREMQESMALDLKVLEAALAAEMSEKRALQQRREVERRALIEQREIVRRQLQDEKERELLLDQMYEREAAEMWRRREAEWARERVARQRLMEAVLGERREQLRRRMDMLRERDEEIQKEREELMALVEETRMETERKRAMQAEQVTRRREELQYQVEDVDHRREMERRMALEEMRAEEEAKQDLDRYIQEETARMTARPLPTYTRRKVAWNQ* # ORIGINAL: g5978.t1 original gene structure, not modified by PASA NODE_2219_length_7198_cov_38.6351 AUGUSTUS gene 5738 7042 . + . ID=g5978;Name=g5978.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS mRNA 5738 7042 . + . ID=g5978.t1;Parent=g5978;Name=g5978.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS exon 5738 6661 . + . ID=g5978.t1.exon1;Parent=g5978.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS CDS 5738 6661 . + 0 ID=cds.g5978.t1;Parent=g5978.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS exon 6851 7042 . + . ID=g5978.t1.exon2;Parent=g5978.t1 NODE_2219_length_7198_cov_38.6351 AUGUSTUS CDS 6851 7042 . + 0 ID=cds.g5978.t1;Parent=g5978.t1 #PROT g5978.t1 g5978 MDNPQPSAGDPGGENFIIAVRVRPTPEPENAVVRVDSRTTLAITVAERGTEAATHSFSFDQAYGCDSEQTAVFQRTAQRAVVSAMEGLNATIFAYGQTGTGKTFTMEGTTEHPGIIPRAFDMIFSRVAEQKSAGVSFLLRASFCQIYNENVVDLLAPSAADQRPLKIREDAKGGVYVQNLSQWIVRERADCQRLLARGGEMRTVASTKMNATSSRSHAVFSVVVEQSGARSSGAGKVRVARLNLVDLAGSERVRDTGADGKRLDEAKNINQSLAAFGNVISALAQKAKGGQGQVHVPYRDSKLTRMLQTSLGGNCRTVLIATISPDYRSSLESLTTLRFAARARNVRAKVTVNEEAEGGTVLARCASLPSL* # ORIGINAL: g11684.t1 original gene structure, not modified by PASA NODE_1523_length_10742_cov_41.6108 AUGUSTUS gene 7016 10680 . + . ID=g11684;Name=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS mRNA 7016 10680 . + . ID=g11684.t1;Parent=g11684;Name=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 7016 8056 . + . ID=g11684.t1.exon1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 7016 8056 . + 0 ID=cds.g11684.t1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 8403 8495 . + . ID=g11684.t1.exon2;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 8403 8495 . + 0 ID=cds.g11684.t1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 8633 8765 . + . ID=g11684.t1.exon3;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 8633 8765 . + 0 ID=cds.g11684.t1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 9244 9340 . + . ID=g11684.t1.exon4;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 9244 9340 . + 2 ID=cds.g11684.t1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 9823 9919 . + . ID=g11684.t1.exon5;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 9823 9919 . + 1 ID=cds.g11684.t1;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 10567 10680 . + . ID=g11684.t1.exon6;Parent=g11684.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 10567 10680 . + 0 ID=cds.g11684.t1;Parent=g11684.t1 #PROT g11684.t1 g11684 MSESWFDSVEAPAWPEDADTDARQLGVGVVKGDGVFVDASSTRKKRKKRSKGAKKGADMGPPRDGDPPVGAARPSTGKAPITNTGKHSTVNPASTTGKNAAGKKGGKGDEAVEGTGPSSGDVSASTESKSAREIPAVSGGVKAQAGASSKQTDANPVVKAKGLSPAAVKGVASTAVDIATKNKRKRTQDGNSEQHSVPDNSKETDAPPPAKRSRKDVAAREVLSAVVSESPSTGGAGQSVAVDGAGAGAGAGTAKSSKKGLANAAAAKTPTVTADVKKDKKDVKDRKEPSDAVATVHASSTKKATPLTEAAKKLSGARFRWINEMLYTTTGDEAQRLFVNEPELFDAYHQGFQSQVASWPTNPVDVIIAQLLKMPRGKTVADFGCGEAALAREVKGHHIVHSFDLVAANVHVTACDISHVPLADASVDVAVFCLSLMGTNFADFLKEAFRVLKIGGTLKVAEVVSRLTDVKAFVASLKSLGFDIIGKAINEHLLRQSDKMSLGIGNLLKDEVNAANGSVVAMRI* # PASA_UPDATE: g11682.t1, single gene model update, valid-1, status:[pasa:asmbl_1859,status:12], valid-1 NODE_1523_length_10742_cov_41.6108 . gene 118 1610 . + . ID=g11682;Name=g11682.t1 NODE_1523_length_10742_cov_41.6108 . mRNA 118 1610 . + . ID=g11682.t1;Parent=g11682;Name=g11682.t1 NODE_1523_length_10742_cov_41.6108 . exon 118 231 . + . ID=g11682.t1.exon1;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . CDS 118 231 . + 0 ID=cds.g11682.t1;Parent=g11682.t1;5_prime_partial=true NODE_1523_length_10742_cov_41.6108 . exon 473 523 . + . ID=g11682.t1.exon2;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . CDS 473 523 . + 0 ID=cds.g11682.t1;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . exon 955 999 . + . ID=g11682.t1.exon3;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . CDS 955 999 . + 0 ID=cds.g11682.t1;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . exon 1136 1176 . + . ID=g11682.t1.exon4;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . CDS 1136 1176 . + 0 ID=cds.g11682.t1;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . exon 1435 1610 . + . ID=g11682.t1.exon5;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . CDS 1435 1471 . + 1 ID=cds.g11682.t1;Parent=g11682.t1 NODE_1523_length_10742_cov_41.6108 . three_prime_UTR 1472 1610 . + . ID=g11682.t1.utr3p1;Parent=g11682.t1 #PROT g11682.t1 g11682 DALKQYFSRYGSVKDSVVVIDRITGRSKGFGFIEFETKDEADKVLAAQHQMDGRDLAIQAATERPARRPFDGNFNNNNNSGPRGGRRDGPAEDAF* # ORIGINAL: g11683.t1 original gene structure, not modified by PASA NODE_1523_length_10742_cov_41.6108 AUGUSTUS gene 2035 6472 . + . ID=g11683;Name=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS mRNA 2035 6472 . + . ID=g11683.t1;Parent=g11683;Name=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 2035 2181 . + . ID=g11683.t1.exon1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 2035 2181 . + 0 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 2295 2636 . + . ID=g11683.t1.exon2;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 2295 2636 . + 0 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 2787 2851 . + . ID=g11683.t1.exon3;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 2787 2851 . + 0 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 3047 3309 . + . ID=g11683.t1.exon4;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 3047 3309 . + 1 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 3600 3904 . + . ID=g11683.t1.exon5;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 3600 3904 . + 2 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 4202 4311 . + . ID=g11683.t1.exon6;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 4202 4311 . + 0 ID=cds.g11683.t1;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS exon 4819 6472 . + . ID=g11683.t1.exon7;Parent=g11683.t1 NODE_1523_length_10742_cov_41.6108 AUGUSTUS CDS 4819 6472 . + 1 ID=cds.g11683.t1;Parent=g11683.t1 #PROT g11683.t1 g11683 MGDGSVFEGGGVVSSALEVFIVQLLLIVVFSRVIAFLLKPLKQPPVIAEIVAGIILGPTALSRSTPFKEHIFPTSSLGVLSVFANVGLIIFLFIIGLEADLTLLTKGSKQSLIISGVGIALPFGLGAALSKYLYDEFAPEGTDVDFGTFLLFIGCATSITAFPVLARILTERKLLNTTVGMATIGAAAIDDVAAWCILALVVSLVRAGSSKLVALYTSLTAIGLILFLVLLVRPVLRKLAVRSLSTRRQLPHSAVVMCFMGMFLCAWMTEWIGIHAIFGAFAFGLIVPREGGLTTQLTEKLEDLVVTMFLPLYFTLSGLKTNLGLISSGKAAGGTILIILIAITGKFGGCTAMARYCGYSVRHSLTIGILMNTKGLVEIVVLNIGLDNGIISQQLFSMCVVMALFCTFITTPLTYLTYPKHHVIKDMVGRMTQRLNEAKDVDGTPDNAAPGGVAGAVKPQKPTEQSSEMLELDIAAANRRGTKDSGHRRVVSWLFGDNATSFPLLTLTASVMASKGARNVSVVRLTDTSSRPSSYMRHIVSAGDPKSQQWRSMLGSHAQMLQIGGCTDVVTFASDAPIDDVCEVARVKNAEMVVAGFPAPDPFQSDGSRADAILNLARVVTSLGAQWKSDLGVFVVRGMPAVMRRVVCAVESTESVASVENDLLAMRLVGRMAKTRAAGEIVLLITGSAQPELRDYDATKAVAAVHETGAQEGGDVRVEVAMVDGTDVGGAGGASSYSTAAVGAGAEPTHHPSRSQLQPPLRDARVDPNDDRTNKFGFHDQSGESSVRSSRYGGFGSRESSYRIRNAMQEIKKKPAKTDTSASASGSRRSSVGGRDDAESRVFRLAEAIEIVLTREQRSKTARKITQVVRKPEDSLEHAIREEVDKFKPDLLVLDYDIVFGDSDRLSTSLARYILLECKCSVLLVRRDVDAVVAVAHAGTCETSAEELSHTDAIGVPFSHV* # ORIGINAL: g2959.t1 original gene structure, not modified by PASA NODE_5273_length_935_cov_60.3465_potentialcontaminant AUGUSTUS gene 2 630 . + . ID=g2959;Name=g2959.t1 NODE_5273_length_935_cov_60.3465_potentialcontaminant AUGUSTUS mRNA 2 630 . + . ID=g2959.t1;Parent=g2959;Name=g2959.t1 NODE_5273_length_935_cov_60.3465_potentialcontaminant AUGUSTUS exon 2 630 . + . ID=g2959.t1.exon1;Parent=g2959.t1 NODE_5273_length_935_cov_60.3465_potentialcontaminant AUGUSTUS CDS 2 630 . + 2 ID=cds.g2959.t1;Parent=g2959.t1 #PROT g2959.t1 g2959 TAVRAGRYELVRMIDRRLPGLSASLPSAVHSRRWRLCRWVIDRSPSALSPDKVRTAFLSAVSGCRLDFVRWFEERLPDVVASCVPDIKFALVKVRDMSIFRAILERNPTAFCYQDLSQQYKMPVAVSYDTFVVEQLLGVELVRRPLRVSDLAEAGRRDVLQAAIDFHVPLHRPYATMFDPTSPHVLRNPPLLEWFRKNDAAGKFNFTS* # PASA_UPDATE: g949.t1, single gene model update, valid-1, status:[pasa:asmbl_8214,status:12], valid-1 NODE_5652_length_767_cov_45.0737 . gene 148 723 . + . ID=g949;Name=g949.t1 NODE_5652_length_767_cov_45.0737 . mRNA 148 723 . + . ID=g949.t1;Parent=g949;Name=g949.t1 NODE_5652_length_767_cov_45.0737 . exon 148 222 . + . ID=g949.t1.exon1;Parent=g949.t1 NODE_5652_length_767_cov_45.0737 . CDS 148 222 . + 0 ID=cds.g949.t1;Parent=g949.t1;5_prime_partial=true NODE_5652_length_767_cov_45.0737 . exon 499 723 . + . ID=g949.t1.exon2;Parent=g949.t1 NODE_5652_length_767_cov_45.0737 . CDS 499 723 . + 0 ID=cds.g949.t1;Parent=g949.t1 #PROT g949.t1 g949 VYLRTTGGEAGAASSLAPKVGPLGLAPKKVGDDIAKSTQDWKGLKITVRLTIQNRQAKIDVVPSASSLVIKYLKEPPRDRKKEKNSAYRIYLQLRRISY* # PASA_UPDATE: g7562.t1, single gene model update, valid-1, status:[pasa:asmbl_3577,status:12], valid-1 NODE_2124_length_7620_cov_37.9755 . gene 2 2344 . + . ID=g7562;Name=g7562.t1 NODE_2124_length_7620_cov_37.9755 . mRNA 2 2344 . + . ID=g7562.t1;Parent=g7562;Name=g7562.t1 NODE_2124_length_7620_cov_37.9755 . five_prime_UTR 2 3 . + . ID=g7562.t1.utr5p1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 2 137 . + . ID=g7562.t1.exon1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 4 137 . + 0 ID=cds.g7562.t1;Parent=g7562.t1;5_prime_partial=true NODE_2124_length_7620_cov_37.9755 . exon 299 437 . + . ID=g7562.t1.exon2;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 299 437 . + 1 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 572 724 . + . ID=g7562.t1.exon3;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 572 724 . + 0 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 919 999 . + . ID=g7562.t1.exon4;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 919 999 . + 0 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 1329 1477 . + . ID=g7562.t1.exon5;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 1329 1477 . + 0 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 1738 1783 . + . ID=g7562.t1.exon6;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 1738 1783 . + 1 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . exon 2002 2344 . + . ID=g7562.t1.exon7;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . CDS 2002 2238 . + 0 ID=cds.g7562.t1;Parent=g7562.t1 NODE_2124_length_7620_cov_37.9755 . three_prime_UTR 2239 2344 . + . ID=g7562.t1.utr3p1;Parent=g7562.t1 #PROT g7562.t1 g7562 QISLRSAAEALGVSVMPVREAMQRLVAEQALELTPSRTLRVPRMTLDLGGVQLSLKFAELLSSFLESQSPACKLKYLDLSRTDISRKGVLMVVTALSRNHHLESLMIGGNDVDKMVVEVLAASLVHNTTLTELSLRRSDLLAAGYRALSDALKTNTTLRILDLGYNRVDNVALKCLGDALAINSSLENLILAGCADVGTDGLEYLVHPLGTNANKSLYRLNLDGCAIGDKGIDKVVFMLRQSKHLQKLSLRSNGLSHIGAMAVLCALEKNQSLRSLNLARNVVHKEDALVNLVAEHSAGGRQIIVEYAEPKK* # PASA_UPDATE: g7563.t1, single gene model update, valid-1, status:[pasa:asmbl_3578,status:3], valid-1 NODE_2124_length_7620_cov_37.9755 . gene 2732 5842 . + . ID=g7563;Name=g7563.t1 NODE_2124_length_7620_cov_37.9755 . mRNA 2732 5842 . + . ID=g7563.t1;Parent=g7563;Name=g7563.t1 NODE_2124_length_7620_cov_37.9755 . five_prime_UTR 2732 2887 . + . ID=g7563.t1.utr5p1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 2732 3010 . + . ID=g7563.t1.exon1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . CDS 2888 3010 . + 0 ID=cds.g7563.t1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 3345 3494 . + . ID=g7563.t1.exon2;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . CDS 3345 3494 . + 0 ID=cds.g7563.t1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 3889 4041 . + . ID=g7563.t1.exon3;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . CDS 3889 4041 . + 0 ID=cds.g7563.t1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 4305 4550 . + . ID=g7563.t1.exon4;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . CDS 4305 4550 . + 0 ID=cds.g7563.t1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 4872 5264 . + . ID=g7563.t1.exon5;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . CDS 4872 4940 . + 0 ID=cds.g7563.t1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . exon 5616 5842 . + . ID=g7563.t1.exon6;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . three_prime_UTR 4941 5264 . + . ID=g7563.t1.utr3p1;Parent=g7563.t1 NODE_2124_length_7620_cov_37.9755 . three_prime_UTR 5616 5842 . + . ID=g7563.t1.utr3p2;Parent=g7563.t1 #PROT g7563.t1 g7563 MFKVFGRTAKTADREFDEDLERLHRLETACTRIERDVAKYQESRKLMVTALQKLTTTLNTATTDGQSLDIIAARNAYAEAVLKIDQSCRDFDGNMRTLVNDPVDRLLKVFPHVDEHLKRREARLIEYEKIQERAGKSSTDLKMQQSLGSAKTAYTELHARLKEEVPTIFTSRVEYFDPCFEGLIRAQWHFYNSSCDSVAASLGSAKGMAPFKESNDQYERRYDQVMKDFSALSIVGGRARSGADKK* # PASA_UPDATE: novel_model_12_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_3576,status:3], valid-1 NODE_2124_length_7620_cov_37.9755 . gene 6069 7503 . - . ID=novel_gene_12_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2124_length_7620_cov_37.9755 . mRNA 6069 7503 . - . ID=novel_model_12_5b6be656;Parent=novel_gene_12_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2124_length_7620_cov_37.9755 . five_prime_UTR 7312 7503 . - . ID=novel_model_12_5b6be656.utr5p1;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . exon 7177 7503 . - . ID=novel_model_12_5b6be656.exon1;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . CDS 7177 7311 . - 0 ID=cds.novel_model_12_5b6be656;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . exon 6679 6762 . - . ID=novel_model_12_5b6be656.exon2;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . CDS 6679 6762 . - 0 ID=cds.novel_model_12_5b6be656;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . exon 6069 6253 . - . ID=novel_model_12_5b6be656.exon3;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . CDS 6092 6253 . - 0 ID=cds.novel_model_12_5b6be656;Parent=novel_model_12_5b6be656 NODE_2124_length_7620_cov_37.9755 . three_prime_UTR 6069 6091 . - . ID=novel_model_12_5b6be656.utr3p1;Parent=novel_model_12_5b6be656 #PROT novel_model_12_5b6be656 novel_gene_12_5b6be656 MAEASTTDLAVYGVGEDGKNKDLIVCVRCGSKILQRSMSKLVENELTLPPYKKRGEGSSDDEHEVVRQFWHVTNMFDFENMGFSHTVGTLKYLACADCDVGPLGLHDTADKTQTFLAAGRVKYIVQ* # ORIGINAL: g4091.t1 original gene structure, not modified by PASA NODE_500_length_22251_cov_37.7987 AUGUSTUS gene 14163 17434 . + . ID=g4091;Name=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS mRNA 14163 17434 . + . ID=g4091.t1;Parent=g4091;Name=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 14163 14542 . + . ID=g4091.t1.exon1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 14163 14542 . + 0 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 14777 15076 . + . ID=g4091.t1.exon2;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 14777 15076 . + 1 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 15305 15411 . + . ID=g4091.t1.exon3;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 15305 15411 . + 1 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 15582 15667 . + . ID=g4091.t1.exon4;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 15582 15667 . + 2 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 15921 16044 . + . ID=g4091.t1.exon5;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 15921 16044 . + 0 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 16728 16932 . + . ID=g4091.t1.exon6;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 16728 16932 . + 2 ID=cds.g4091.t1;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 17194 17434 . + . ID=g4091.t1.exon7;Parent=g4091.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 17194 17434 . + 1 ID=cds.g4091.t1;Parent=g4091.t1 #PROT g4091.t1 g4091 MESQVEGNASKRRRVDGGDSVLAVGDGRIESAPTGATAAQTGGSTTTASSSASATLTLAPPSGLPNNAGDRRKAAWFPDRCQHYCRNKQRYCRMEKVPGGEFCGVHVHEHSKDAETTRRPCPYDPNHTVTSNPKKYERHLRTCNSRPIARAYDVQGLNSHRPTDAEGEYDDYADPTALRSASMDELNALIARVDAVWKSDIGSLFLEDKGKVHPVFKEELEGATVGKHTRRHLLQESSLVSLMDDNGFVGRNKCFVEFGCGKARLTHALYRAVGSLPSAYLLVDRGHNKNKCDRFLKYDTSIALERVMIDIENLDVSKTATGIKMEGRAQAEDTPKSALSTADADVNGAAVNGAAVSETAAAGASTADKDGLASRGDVAGDDEDVAEDAEHTTGDTSFAAKLDLDAAAREALGRKCKMLINEGRARFLRDAGFDVTFHGYVARDVSPENVAMVVVRKRSVPTAPAVTTAPVTASVTPAHD* # PASA_UPDATE: g4090.t1, single gene model update, valid-1, status:[pasa:asmbl_7804,status:12],[pasa:asmbl_7805,status:12], valid-1 NODE_500_length_22251_cov_37.7987 . gene 8247 13689 . - . ID=g4090;Name=g4090.t1 NODE_500_length_22251_cov_37.7987 . mRNA 8247 13689 . - . ID=g4090.t1;Parent=g4090;Name=g4090.t1 NODE_500_length_22251_cov_37.7987 . five_prime_UTR 13572 13689 . - . ID=g4090.t1.utr5p1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 13528 13689 . - . ID=g4090.t1.exon1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 13528 13571 . - 0 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 13039 13276 . - . ID=g4090.t1.exon2;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 13039 13276 . - 1 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 12411 12658 . - . ID=g4090.t1.exon3;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 12411 12658 . - 0 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 12006 12148 . - . ID=g4090.t1.exon4;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 12006 12148 . - 1 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 11457 11618 . - . ID=g4090.t1.exon5;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 11457 11618 . - 2 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 11112 11323 . - . ID=g4090.t1.exon6;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 11112 11323 . - 2 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 10782 10868 . - . ID=g4090.t1.exon7;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 10782 10868 . - 0 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 9679 9816 . - . ID=g4090.t1.exon8;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 9679 9816 . - 0 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 9344 9425 . - . ID=g4090.t1.exon9;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 9344 9425 . - 0 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 8948 9133 . - . ID=g4090.t1.exon10;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 8948 9133 . - 2 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 8707 8764 . - . ID=g4090.t1.exon11;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . CDS 8721 8764 . - 2 ID=cds.g4090.t1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . exon 8247 8517 . - . ID=g4090.t1.exon12;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . three_prime_UTR 8707 8720 . - . ID=g4090.t1.utr3p1;Parent=g4090.t1 NODE_500_length_22251_cov_37.7987 . three_prime_UTR 8247 8517 . - . ID=g4090.t1.utr3p2;Parent=g4090.t1 #PROT g4090.t1 g4090 MQEPKSRVELRFSCKGLYSADITSKSDPFCVLYGIEGHTNSGNRHEIGRTEVVKNNENPSFAHEFVVDYFFERLQWFCVAVYDSDGHSQDLSTHDFLGEGVFNLGEIAGSSNRHIDRPLKKGHVTVSLDELQGSENNFIELWLGAEHVDKKDFFGKSDPFFLIHKQAADGSWVLVHRSEVIKNNLNPVWSPANVSLSSLCNGDVNRPIRIEVVDWDSDGSHDFIGATETTVAALVTHARFNLVNPKKQSKKGYTNSGELFVVKQRIYKKPSFLDYILGGCELNFTVAVDFTGSNGNPRAPDSLHYINPSGALNAYESAIVSVGSVVEPYDSDKLFPALGFGAKIQGGETVRFDFPLNFSDTNPYCSGVAGIMAAYRNAIPQVVLWGPTNFSPVINHVARFAAQSVKDGWGANDQQRYYVLLIITDGEITDMPETISAIVNASFLPMSIIIVGVGNADFSNMNALDGDGKLLQSGSKTAARDIVQFVAMNEFYNKPMDALATAVLAEVPAQIVEAFLKNGVAPRPRKC* # PASA_UPDATE: g4088.t1, single gene model update, valid-1, status:[pasa:asmbl_7803,status:3], valid-1 NODE_500_length_22251_cov_37.7987 . gene 1248 4622 . - . ID=g4088;Name=g4088.t1 NODE_500_length_22251_cov_37.7987 . mRNA 1248 4622 . - . ID=g4088.t1;Parent=g4088;Name=g4088.t1 NODE_500_length_22251_cov_37.7987 . five_prime_UTR 4416 4622 . - . ID=g4088.t1.utr5p1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 4365 4622 . - . ID=g4088.t1.exon1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 4365 4415 . - 0 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 4104 4138 . - . ID=g4088.t1.exon2;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 4104 4138 . - 0 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 3292 3481 . - . ID=g4088.t1.exon3;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 3292 3481 . - 1 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 2836 2878 . - . ID=g4088.t1.exon4;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 2836 2878 . - 0 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 2288 2394 . - . ID=g4088.t1.exon5;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 2288 2394 . - 2 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 1845 1933 . - . ID=g4088.t1.exon6;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 1845 1933 . - 0 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . exon 1248 1646 . - . ID=g4088.t1.exon7;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . CDS 1625 1646 . - 1 ID=cds.g4088.t1;Parent=g4088.t1 NODE_500_length_22251_cov_37.7987 . three_prime_UTR 1248 1624 . - . ID=g4088.t1.utr3p1;Parent=g4088.t1 #PROT g4088.t1 g4088 MGNSQSIFSEDQLEEYENCTFFTKKEILGIYKRYQDLNIDNRDRLTRDQILALPELSVNPFRDQIVKVFSEDGSGAMTFEDFLDLLSVFSEGATRDVKASYAFRIYDFDGDGYLDKSDLLDTVKCLCGSELTENDMEFVCDKILEESDLDGDQRLSYVEFEHIIARAPDFINTFRIRV* # ORIGINAL: g4092.t1 original gene structure, not modified by PASA NODE_500_length_22251_cov_37.7987 AUGUSTUS gene 18273 21871 . - . ID=g4092;Name=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS mRNA 18273 21871 . - . ID=g4092.t1;Parent=g4092;Name=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 21002 21871 . - . ID=g4092.t1.exon1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 21002 21871 . - 0 ID=cds.g4092.t1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 20620 20726 . - . ID=g4092.t1.exon2;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 20620 20726 . - 0 ID=cds.g4092.t1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 19301 20339 . - . ID=g4092.t1.exon3;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 19301 20339 . - 1 ID=cds.g4092.t1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 19016 19095 . - . ID=g4092.t1.exon4;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 19016 19095 . - 0 ID=cds.g4092.t1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 18674 18834 . - . ID=g4092.t1.exon5;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 18674 18834 . - 1 ID=cds.g4092.t1;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 18273 18355 . - . ID=g4092.t1.exon6;Parent=g4092.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 18273 18355 . - 2 ID=cds.g4092.t1;Parent=g4092.t1 #PROT g4092.t1 g4092 MLSTDGASGGSGSAVTAPSPRRDVSGDDAAIDIHGDEWIVELPATPGGLSVAADAAAINAAIPSSPHTSLTPSNSQTMGFGERPSSAQKGSVAATHNATATATATVTATATAGSSVALLVASDASASAQERSADSKGSSTQSSVKGKKGSASGSGAAGSAAAAAVVGVNKSESSSQIVAGGVSRTSTKDVSRKNSTALAMASTDVLACKKRAKKVRQRVIARGLEFAASYASERPSEGKSESDALSESKLARAGRQLRAVMEGSEDASPANKVDAIERCFAELARSYDAKTDPCDSQGLFEWLRGMASVLSATEVSLKPPHPMPAKTLIAAVTSMSAVLGSSRELAHVTSQNGVAALAAIDLCVRSLACLHSAAPPDASGPGNAGNGEHQKGAVGDSTLALQLATHTALLVARLFAAPVSIAPPQQQQQQQQQQQQKVAEPGDERGPSVSLRRQMRCDLIAYAQSVGVFDLVRRFFCLVSRPFDANPSTQPAPLVCTLLEVLLAATDDPSATEHAESTIAAQLSSSIAAASSGVGHPAAKASPEPDGALGALLSDDLCGIVPLLFAILPPPAQLSASASASSLLTSLSGNAGSLLNRATRATVSASLEIACRVARGCGILRFQKTCREGANGALGLCLVLSSVVYHASAIVAKGPLAVPAADARSREVVVGEEWLQRGSVQSLLQLLASLPFQYFSDARLIEVSFPTLIACCYANERNRRVLAEEMDVQMLAAHLKRWADRELPDAASDLGGVRTAFRIDRRFPSTLFSDAIAFFSAPV* # ORIGINAL: g4087.t1 original gene structure, not modified by PASA NODE_500_length_22251_cov_37.7987 AUGUSTUS gene 512 728 . + . ID=g4087;Name=g4087.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS mRNA 512 728 . + . ID=g4087.t1;Parent=g4087;Name=g4087.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS exon 512 728 . + . ID=g4087.t1.exon1;Parent=g4087.t1 NODE_500_length_22251_cov_37.7987 AUGUSTUS CDS 512 728 . + 1 ID=cds.g4087.t1;Parent=g4087.t1 #PROT g4087.t1 g4087 IAEGGLTAVAMSRDGTYAFAGVSEGYVRAFTTDLALLAQLASLKSAGPDGKAFVASIGDNRCVEQIAGLDL* # PASA_UPDATE: g4089.t1, single gene model update, valid-1, status:[pasa:asmbl_7802,status:3], valid-1 NODE_500_length_22251_cov_37.7987 . gene 4920 8077 . + . ID=g4089;Name=g4089.t1 NODE_500_length_22251_cov_37.7987 . mRNA 4920 8077 . + . ID=g4089.t1;Parent=g4089;Name=g4089.t1 NODE_500_length_22251_cov_37.7987 . five_prime_UTR 4920 5011 . + . ID=g4089.t1.utr5p1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 4920 5996 . + . ID=g4089.t1.exon1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 5012 5996 . + 0 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 6110 6239 . + . ID=g4089.t1.exon2;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 6110 6239 . + 2 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 6579 6870 . + . ID=g4089.t1.exon3;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 6579 6870 . + 1 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 7140 7334 . + . ID=g4089.t1.exon4;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 7140 7334 . + 0 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 7564 7645 . + . ID=g4089.t1.exon5;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 7564 7645 . + 0 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . exon 7939 8077 . + . ID=g4089.t1.exon6;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . CDS 7939 8057 . + 2 ID=cds.g4089.t1;Parent=g4089.t1 NODE_500_length_22251_cov_37.7987 . three_prime_UTR 8058 8077 . + . ID=g4089.t1.utr3p1;Parent=g4089.t1 #PROT g4089.t1 g4089 MRATVVVVCVFLLSVVASTSSSVIPPEQRGHGFSKMVSLVSVGDRPPLDDDDALLTDDTLAAYDKYRKRNFKIVPGMTAASDADGWFDDAVNQTGWGEFRGSSNPSLSALKQGFAVGFLEGALTYERIHQAYANFVAATGLPSTGALPDKVSAYVLAQNAYLWDNVNKSLESFANNDEGDDGERAFWIQVGVVLAQAEGIYAGYAHSAPSENSLTQSQVYALTLAGDLEDLLPALSGMRSANANDDTEADLNTAVNSVGEKLKDWPVRVTERMDCSGLVKLDPVTGKLLVGHSTFNMYSYLLRIFKHYTMDLSRYGAVSTTTSFSARPADLNSKDDFYLLDSGLVVMETSLSVFNKSLYAQLTPNSVPSWIRCQVANRLADSGSEWARIFALHNSGTHNNQWIVTDLKRSPSKMWRSASVSLDSLENGIVWIAEQMPGTVVSADVTTTLLATQLYVPSYNVPYFPEIFNLSGYRDAGFSYDKDPRASMFRRDHPLARDLASMGALMRQNRGAEDPLSGSTPCNAICARCDLQAQGGYAFGCIDTKVVDEESASEGRILAVAGPTHDQQPVFSFGSAWASVPHEGLPDSFPFDWVWMDPLA* # ORIGINAL: g2321.t1 original gene structure, not modified by PASA NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS gene 3088 3369 . + . ID=g2321;Name=g2321.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS mRNA 3088 3369 . + . ID=g2321.t1;Parent=g2321;Name=g2321.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS exon 3088 3369 . + . ID=g2321.t1.exon1;Parent=g2321.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS CDS 3088 3369 . + 0 ID=cds.g2321.t1;Parent=g2321.t1 #PROT g2321.t1 g2321 MGHPTEFDMFDENAPPRCDPGAPGPEGDEAQEAIDEAYYARTFQDVADVWGKASMERQFAALPLHATDPPDRVAHAKWLFARSEERVPPRATG* # ORIGINAL: g2320.t1 original gene structure, not modified by PASA NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS gene 336 1346 . - . ID=g2320;Name=g2320.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS mRNA 336 1346 . - . ID=g2320.t1;Parent=g2320;Name=g2320.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS exon 336 1346 . - . ID=g2320.t1.exon1;Parent=g2320.t1 NODE_3143_length_4207_cov_22.8287_potentialcontaminant AUGUSTUS CDS 336 1346 . - 0 ID=cds.g2320.t1;Parent=g2320.t1 #PROT g2320.t1 g2320 MHLISEKTELDYKDVLIRPKNSHLKSRQDVNLQTSLTFKHTASKFEGIPIIAANMDTVGTIEMAKALSQHDCVTALHKFIDPEEIAQLNPDRYMVSTGITKEDQVRLKRFTGYKMICVDVANGYMECVDSAVSRLRDEFPTAIISCGNVVTGDRTEELIEAGADIVKVGIGSGSVCTTRLKTGVGRPQLSAVSECADVARSIGGHVISDGGATVPGDLSKAFGAGASFVMLGSMLAGHHECAGELIDADDGRQFKLFYGMSSDTAMHKHFGGHAHYRSSEGKTVRVPYKGHVNHTILDILGGLRSTCTYVGASELSELPNLVSFYRVNSQVNQIYN* # PASA_UPDATE: g11428.t1, single gene model update, valid-1, status:[pasa:asmbl_7297,status:12], valid-1 NODE_4410_length_1659_cov_30.2475 . gene 168 1535 . - . ID=g11428;Name=g11428.t1 NODE_4410_length_1659_cov_30.2475 . mRNA 168 1535 . - . ID=g11428.t1;Parent=g11428;Name=g11428.t1 NODE_4410_length_1659_cov_30.2475 . five_prime_UTR 1535 1535 . - . ID=g11428.t1.utr5p1;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . exon 1400 1535 . - . ID=g11428.t1.exon1;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . CDS 1400 1534 . - 0 ID=cds.g11428.t1;Parent=g11428.t1;5_prime_partial=true NODE_4410_length_1659_cov_30.2475 . exon 954 1135 . - . ID=g11428.t1.exon2;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . CDS 954 1135 . - 0 ID=cds.g11428.t1;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . exon 624 750 . - . ID=g11428.t1.exon3;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . CDS 624 750 . - 1 ID=cds.g11428.t1;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . exon 168 278 . - . ID=g11428.t1.exon4;Parent=g11428.t1 NODE_4410_length_1659_cov_30.2475 . CDS 168 278 . - 0 ID=cds.g11428.t1;Parent=g11428.t1;3_prime_partial=true #PROT g11428.t1 g11428 IHVISTLKRPVPLEHHLYTGNSQKTQNELFKVVDSSGNFLQNGYKAAVDALADRKKKEKDKYGPKSGSGSGAGGRATDKAIYLNAVDFLKKKELLPVVVFTFSKRRCEENADSLSNVELTSSSEKSEIRVFIESCVARLKDTDKQLPQVLRMREMLSRGIGVHHGGLLPIIKEMVELLFQRGLVR # ORIGINAL: g3893.t1 original gene structure, not modified by PASA NODE_1446_length_11227_cov_43.6091 AUGUSTUS gene 2622 3458 . + . ID=g3893;Name=g3893.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS mRNA 2622 3458 . + . ID=g3893.t1;Parent=g3893;Name=g3893.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS exon 2622 3458 . + . ID=g3893.t1.exon1;Parent=g3893.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS CDS 2622 3458 . + 0 ID=cds.g3893.t1;Parent=g3893.t1 #PROT g3893.t1 g3893 MASFAISIGIQVAIGGIKQARTKSGNGGRAQELGKRLENVVELLKVLQTKYGNDALPAILTPDIEAMSATIQETVDYIRQADEESGVAGFFHAGAHEENFYRLDKAITACVSNLSVHCLELMMALPATSTTAPIKQQRHLSPIPSPTPMRPVSDPFDDLSDHAAAQEYQKPPAHARFHDSPVYASATPAYLSAPQPAQPQYAPARPVSPAPSSANSANSASGAHSGFAAAVGSSAVPSKAVSDAQTKRVPFRLVRKLYGRVERIGERLYGAVSDKRRD* # PASA_UPDATE: g3895.t1, single gene model update, valid-1, status:[pasa:asmbl_1614,status:12],[pasa:asmbl_1616,status:12], valid-1 NODE_1446_length_11227_cov_43.6091 . gene 6889 11227 . - . ID=g3895;Name=g3895.t1 NODE_1446_length_11227_cov_43.6091 . mRNA 6889 11227 . - . ID=g3895.t1;Parent=g3895;Name=g3895.t1 NODE_1446_length_11227_cov_43.6091 . five_prime_UTR 11227 11227 . - . ID=g3895.t1.utr5p1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 9553 11227 . - . ID=g3895.t1.exon1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 9553 11226 . - 0 ID=cds.g3895.t1;Parent=g3895.t1;5_prime_partial=true NODE_1446_length_11227_cov_43.6091 . exon 9036 9363 . - . ID=g3895.t1.exon2;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 9036 9363 . - 0 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 8697 8854 . - . ID=g3895.t1.exon3;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 8697 8854 . - 2 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 8437 8582 . - . ID=g3895.t1.exon4;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 8437 8582 . - 0 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 7959 8145 . - . ID=g3895.t1.exon5;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 7959 8145 . - 1 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 7512 7733 . - . ID=g3895.t1.exon6;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 7512 7733 . - 0 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . exon 6889 7223 . - . ID=g3895.t1.exon7;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . CDS 7155 7223 . - 0 ID=cds.g3895.t1;Parent=g3895.t1 NODE_1446_length_11227_cov_43.6091 . three_prime_UTR 6889 7154 . - . ID=g3895.t1.utr3p1;Parent=g3895.t1 #PROT g3895.t1 g3895 GPGGPPPPPPPPPVSAPKTGGAFGKKAEVAAPPAVKTEPLPVLAGAPQSYSAQPWTLNVRKETFAPNEKLDSPIAIDLIFAQIFNDVSSGSRARLQDEDISAAQSAFSSKGISSATGGDQAAKVEIIELAKKWPIYFCRFYAVAGQSGTPPGCNSFGVNHQGVRLLQAGGGVRTILSQHPFSEVGEVRADGENAFIAEIGGKTLRFVSDKALRIVQFVEATLIAASASAKHMLAIRDYAVTDQTLLRFKRNDIIKVTEKDGKDPGWLFGAANGRTGFFPQEYSIPIIGEPTPAAIEHAKKEYARKQEAAAVQSQQSGGASGASGPSASGAAGAGGRRLSVSGGVGGGPATVGAPPAGKLTAMSRSDSIEGALDRLLEEEDVRPLPHGKLSMVEFAKEHFRLGVERYEMQRTVKGSIRGTLKMLGTVKKSKSSQNFLDEAETALQGGMGEEEILVQWQANPVQASLLRMDVADTARNKLALESFICIMRYMGDYPAKGRSDADLAQWLVKCGLEHEGLRDEMFCQLIKQTTSNRSKRQDSCVRGWNLLLLCSAYFKPTETLEPYLRRYAIDASANTAADYYSASSLVDRYLLKTLRCGGRKVLPDTPEIDALSQGKHSRIQKIYLPGDVSKSVKLNAVAIVRDVIRDICMKMDTPDPDEFGIFVFTGQDQSTPLQPTDYMLDTTTILERRKIPYRFYLKKTLWYAPIRLENDLLNTLLYEQAVPELLKGNILSMTTGSITPQLMERDIALLAAFQHRICQIDIDLAAMPVDGLAGYIPKMLFPLLKPEEWRTAIQNHFASIGHFDVSQAKKAFLEIVMKQFPLYGSTFFQISYCSDTRAQGETILAINKHGIAFLEPITKATLISYTFNEIVSTRRLGSKNAGKHYVDLKCGNLMVQRVTRCETVKGFEITNLITAYVQRHLLANPPS* # ORIGINAL: g3892.t1 original gene structure, not modified by PASA NODE_1446_length_11227_cov_43.6091 AUGUSTUS gene 368 1224 . - . ID=g3892;Name=g3892.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS mRNA 368 1224 . - . ID=g3892.t1;Parent=g3892;Name=g3892.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS exon 1105 1224 . - . ID=g3892.t1.exon1;Parent=g3892.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS CDS 1105 1224 . - 0 ID=cds.g3892.t1;Parent=g3892.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS exon 368 775 . - . ID=g3892.t1.exon2;Parent=g3892.t1 NODE_1446_length_11227_cov_43.6091 AUGUSTUS CDS 368 775 . - 0 ID=cds.g3892.t1;Parent=g3892.t1 #PROT g3892.t1 g3892 MSPSRELTIAIASMYGSLIVVVLFQLARIIYYRHRLVSFQVGFLVLCLVWVSIRTMFFALFEVDFSDAIESILYWTPINLEFATFSLLTVFFARIVHRDTWEQTLRARTYAVWALFNIVFLGVNIVWLITIGEGTSSHTLTNLRVIFTACIFLLLAVFVGIYAVRLVRVVETANIS # PASA_UPDATE: g3894.t1, single gene model update, valid-1, status:[pasa:asmbl_1615,status:3], valid-1 NODE_1446_length_11227_cov_43.6091 . gene 3680 6207 . - . ID=g3894;Name=g3894.t1 NODE_1446_length_11227_cov_43.6091 . mRNA 3680 6207 . - . ID=g3894.t1;Parent=g3894;Name=g3894.t1 NODE_1446_length_11227_cov_43.6091 . five_prime_UTR 5995 6207 . - . ID=g3894.t1.utr5p1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . exon 5464 6207 . - . ID=g3894.t1.exon1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . CDS 5464 5994 . - 0 ID=cds.g3894.t1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . exon 5103 5302 . - . ID=g3894.t1.exon2;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . CDS 5103 5302 . - 0 ID=cds.g3894.t1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . exon 4578 4917 . - . ID=g3894.t1.exon3;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . CDS 4578 4917 . - 1 ID=cds.g3894.t1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . exon 3680 4428 . - . ID=g3894.t1.exon4;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . CDS 4231 4428 . - 0 ID=cds.g3894.t1;Parent=g3894.t1 NODE_1446_length_11227_cov_43.6091 . three_prime_UTR 3680 4230 . - . ID=g3894.t1.utr3p1;Parent=g3894.t1 #PROT g3894.t1 g3894 MASIRTSIQRLTAYSDENATKGANVPAGKAPVDTAPKRAALGDIGNIPKLDSVKEGGVKKVITRPPSARARVLTKPQAAAVLIGANKPGPPGQPTTRPQPMQMAPAAAIAQDAAHAQQATNVEMMDVEAAPVGFSAALLASTMAGMNIEDIDNGDSENPLLVSEYVNDIYQYLWGLERQFRVDVDYMSHQPELNVKMRAILVDWLVEVQLKFKLLQETLYLTVHIIDRFLGVEAVERSRLQLVGVTAMLVAAKYEEIYTPEVMDFVYITESAYERDEILAMERLILRKLGFSLGSPAPLHFLRRDSKAAGASGTLHTMAKYLMEITLPEYHMLKYLPSEIAAASLWLSMRLTNEGAWNSTIQHYSNFSERSLMPCVNDIFQILTKLPTARLQAIRRKYQSSKLFKVAVIAEHAAASITIPSA* # PASA_UPDATE: g14225.t1, single gene model update, valid-1, status:[pasa:asmbl_9471,status:12],[pasa:asmbl_9474,status:12], valid-1 NODE_803_length_17548_cov_42.1915 . gene 12229 14233 . + . ID=g14225;Name=g14225.t1 NODE_803_length_17548_cov_42.1915 . mRNA 12229 14233 . + . ID=g14225.t1;Parent=g14225;Name=g14225.t1 NODE_803_length_17548_cov_42.1915 . five_prime_UTR 12229 12275 . + . ID=g14225.t1.utr5p1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . exon 12229 12408 . + . ID=g14225.t1.exon1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . CDS 12276 12408 . + 0 ID=cds.g14225.t1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . exon 12572 12714 . + . ID=g14225.t1.exon2;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . CDS 12572 12714 . + 2 ID=cds.g14225.t1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . exon 12976 13012 . + . ID=g14225.t1.exon3;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . CDS 12976 13012 . + 0 ID=cds.g14225.t1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . exon 13170 13375 . + . ID=g14225.t1.exon4;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . CDS 13170 13375 . + 2 ID=cds.g14225.t1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . exon 13509 14233 . + . ID=g14225.t1.exon5;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . CDS 13509 13835 . + 0 ID=cds.g14225.t1;Parent=g14225.t1 NODE_803_length_17548_cov_42.1915 . three_prime_UTR 13836 14233 . + . ID=g14225.t1.utr3p1;Parent=g14225.t1 #PROT g14225.t1 g14225 MIADSIIEARFASVREADVSRAITNRYMQDLMDFAETDVVVVGSGPSGLVCAYELSKNPNIRVSIIEASVAPGGGAWVGGQLFSGMVVRKPADALLDELEIPYEDKGNYVLVGHAGLFTLTILSALLRRSNVRLFNATAVEDLVIRDGVVCGVVTNWALVTKAHGTQSCMDPQVIEARVVVSSCGHDGPFGATGVKRLAQLGLVKPVPGMGALDMNKSEDAVVAATREIFPGMVITGMEVAETDGLPRMGASFGGVMVSGLKAARVAGEVLERSKQKPSMA* # PASA_UPDATE: g14222.t1, single gene model update, valid-1, status:[pasa:asmbl_9472,status:12], valid-1 NODE_803_length_17548_cov_42.1915 . gene 281 1232 . - . ID=g14222;Name=g14222.t1 NODE_803_length_17548_cov_42.1915 . mRNA 281 1232 . - . ID=g14222.t1;Parent=g14222;Name=g14222.t1 NODE_803_length_17548_cov_42.1915 . five_prime_UTR 1066 1232 . - . ID=g14222.t1.utr5p1;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . exon 878 1232 . - . ID=g14222.t1.exon1;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . CDS 878 1065 . - 0 ID=cds.g14222.t1;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . exon 645 751 . - . ID=g14222.t1.exon2;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . CDS 645 751 . - 1 ID=cds.g14222.t1;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . exon 281 516 . - . ID=g14222.t1.exon3;Parent=g14222.t1 NODE_803_length_17548_cov_42.1915 . CDS 281 516 . - 2 ID=cds.g14222.t1;Parent=g14222.t1 #PROT g14222.t1 g14222 MKMASLRVLLACVVVAALQVMPTHASFNCGCNTGACCNYHDSCSSCRSGDVWGPYDGIACPYSSPWSYNSCYGKNTFGIARIIGAVIGGFVAIIFFIGLITICCSPTRRTHYVSYFTGGRRFVHPMVAGSTVVYPQQPMYPQPVYTQPTYGYQTYPPQQAFAPGTYPAPAVSVLCC* # ORIGINAL: g14226.t1 original gene structure, not modified by PASA NODE_803_length_17548_cov_42.1915 AUGUSTUS gene 14446 16829 . - . ID=g14226;Name=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS mRNA 14446 16829 . - . ID=g14226.t1;Parent=g14226;Name=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 16685 16829 . - . ID=g14226.t1.exon1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 16685 16829 . - 0 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 16181 16260 . - . ID=g14226.t1.exon2;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 16181 16260 . - 2 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 15834 15978 . - . ID=g14226.t1.exon3;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 15834 15978 . - 0 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 15590 15669 . - . ID=g14226.t1.exon4;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 15590 15669 . - 2 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 15285 15412 . - . ID=g14226.t1.exon5;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 15285 15412 . - 0 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 14956 15093 . - . ID=g14226.t1.exon6;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 14956 15093 . - 1 ID=cds.g14226.t1;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 14446 14566 . - . ID=g14226.t1.exon7;Parent=g14226.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 14446 14566 . - 1 ID=cds.g14226.t1;Parent=g14226.t1 #PROT g14226.t1 g14226 MSHFDIPVLSAATYALEVGGVVERPAVLSYADIRALPSVAMPITMEGSGTLLRNILNMVGIGERAVDIVFTGYDAGFQEGECRSYQRAISIDDPIVDHVLVAYMHNGTDLQPQHGFPIRVVVPGWYGMAGLKWLHRIDLVDHKFKASVYVGYAMTSYSYTKQQLDSNLELPVQEIRPRAIMIPPGLPQFVTRDRILLSGGVMLHGRAWVGGGHRGRHVTLVEVSTDVGVTWRPCEWDGDEGNVQKHAFAAADWNFRGMADGGAHCVSVSVVDDFKRTI* # PASA_UPDATE: g14223.t1, single gene model update, valid-1, status:[pasa:asmbl_9473,status:12], valid-1 NODE_803_length_17548_cov_42.1915 . gene 1398 7206 . - . ID=g14223;Name=g14223.t1 NODE_803_length_17548_cov_42.1915 . mRNA 1398 7206 . - . ID=g14223.t1;Parent=g14223;Name=g14223.t1 NODE_803_length_17548_cov_42.1915 . exon 1398 7206 . - . ID=g14223.t1.exon1;Parent=g14223.t1 NODE_803_length_17548_cov_42.1915 . CDS 1525 7206 . - 0 ID=cds.g14223.t1;Parent=g14223.t1 NODE_803_length_17548_cov_42.1915 . three_prime_UTR 1398 1524 . - . ID=g14223.t1.utr3p1;Parent=g14223.t1 #PROT g14223.t1 g14223 MLPGTQVLILLREWSGQPTPALFHKHLALVISALDHLNSSDTLRSASDALDVSSVYQEGDTDVELQQSLFRLFATAFLAAPRSMRKPISDAVDAMSARSRDAWVLHFIPALLTHIKPTSGTGVPALLSAELIAVTCEHFSTGARCALLCADALLFHIIQRLRRACGLQGEHPVASALPNVEAVANGASGSSGSSGSSGSDDPQALGKALYAATRVCASGASHSVLSEVLLVASTALSRDGLSRDCYVVLGPTVVQCLCVLVGDDAAIDVLAMSVADGGLNGADTAQAAPWSRAPEGGGDGEAESLPTCTVTTAMGRLALLRSVISQFGSTRLDRRPPPAQMSRGANNEAAVCRGDKWSKSVFVDVVLETVCGLCVGGGSPPSKLLAFQTLFLWMSAAGQLLNRQRGEDDRQRQAEDASESVTANTFRDRFTVAGCGCLDKIMGVLWSAWDDAAGIARNAHEVFELALSTLASLDTPRAVPVENSAGAGICDTACVQGTSASNLESGTDATMQRLRTLDDVCTEWIQRFAVLPTGVRWKYAPLATLAKTVGASRLLSLAPDLLNDLATASVDRALAGAAASLCVALAAGESESASRVADAVVVRVALCADEERRCMGEHFLPKLIEAEPAFCMAMASTLSSAKSTLLAFIRVYGSVAAERHRNIEPLPAFIALIAGARRAGVPAAQLVGAEGDGDAAPLVRALFHADPQLRFDAFELYGDMTDMMHDEDIEASDLRDRRIAGFVRKNAGTDSHVLRQRLCACVQRVVQTAQKQHKKRKDARFESRLFLVLHAVAVDCLYTDAPGHVRTGGMSLLSAVHSAAYDSQSPSNCSGCVADNARTLGVLVECLGDEQESVRAAAFDILSAALHSVPLLTNPSMCVESLAAAARCMVSIRAQDAEHGGRLVRLLFRSHALHRGAPLLDSCRSFSEKATVTLVIASIEFGEVSGVSREEAVLSFVRWIMRLLKTQIMVARSSILTAAKESPMYGTLNAMRTLLYDALLETDLTSARARDLWSSTITECIALASDAFAAISDVVCSDSPEGFIPDDAESGASAEKPSAGAGDAAAPVVGSASQLIGVCSWQTARAAAEFLVFAACDVPISCIEFNTCVACARGLLRMGLSVRHKGAMGTIGAAFGRLCSVFVGARGGLLPGLATLPITWMSHAIDEIEGRLPCDNDGPNEKLVGDSITRRSGGLQQIALGVLTSGLSHDSASAAVRRLLAIASSNRPSCNISGIGGVDVEPVSLIDDPPQSHALNILTALYKDARLVALMGAFVGEGLAAAVSCFASASWAVRNSATMALSALLGRVFGTARLEPMTDREFFGRFPSLHTYLLTCLVTCADQIAATASGSVHLHPFLHPVLTIISRLRPSPLTSDGADTLLCSFLEPTLACAASPIFMARRTAAAAVAAIINPAGAAHLVASLIMRLPNAPSGGSGRMTQNELHGILLTIESVATSHASVCTRILDASSMVQRAHWIATAVNRCAVTRATAIRAIRALGVVVDADSQGHNTARDIGGWWVPHSIAVGQLEHDDAAGALTASLIAAEAVEVRLAALRHAGQVYAPADPCTARHAMPFAVWSALCRSVDVEDDVKCLKIVARTIARTEGRIPASGSDQGETGMREASAVHGIHSLPLLVRSLLSRWRSTGSVPCRSWLLRAVGVVLAMLAEDSNTSRSEGATDEHIEAWVCALEASINPADQPAEIRDAAAHSLVVGCERILSSGPATLALRVFTIAFALLVDPDDDVRSIAATFTRHLGHGSEWVSCDSWTAIESLVAACARRAVALNSIVEWEETVFRWAAYSCGRMDSSSLVELHRTTGIPPSHASNSTPRQASQRLFPRLVDGCQCDYVLVCSQIRAGVRSQGCDEASARRICALMAVASSASGASVEAE* # ORIGINAL: g14224.t1 original gene structure, not modified by PASA NODE_803_length_17548_cov_42.1915 AUGUSTUS gene 9569 11536 . - . ID=g14224;Name=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS mRNA 9569 11536 . - . ID=g14224.t1;Parent=g14224;Name=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 11437 11536 . - . ID=g14224.t1.exon1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 11437 11536 . - 0 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 11118 11317 . - . ID=g14224.t1.exon2;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 11118 11317 . - 2 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 10851 11001 . - . ID=g14224.t1.exon3;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 10851 11001 . - 0 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 10556 10682 . - . ID=g14224.t1.exon4;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 10556 10682 . - 2 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 10174 10306 . - . ID=g14224.t1.exon5;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 10174 10306 . - 1 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 9863 9964 . - . ID=g14224.t1.exon6;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 9863 9964 . - 0 ID=cds.g14224.t1;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS exon 9569 9667 . - . ID=g14224.t1.exon7;Parent=g14224.t1 NODE_803_length_17548_cov_42.1915 AUGUSTUS CDS 9569 9667 . - 0 ID=cds.g14224.t1;Parent=g14224.t1 #PROT g14224.t1 g14224 MSTDKISFLLNWHANPYHAPIFVAQKNDYFADEGIKVAILEPTDPSDVTELIGSGKCDMGLKAMVHTIAAKARGFPVTSIGTLLDEPPTGIVFLKKSGIKSFDDIKGRRVGYVGEFGKIIIDEICARKGMSKADYTAVRVGMNLTEAIKNGDVDCGVGLSNYQQVELDDISNGGADMLRIDELADLGCCCFCSVLYIANDDFLKRHPDRVHAFMRAVKRGYEFCFQSPTKGFEIFAQAKPLMDTPLYKKIYEASAPFFHPTLENVERDWNKVTAYSRRLGLISEDFKANYSNEFVRFVDKKED* # ORIGINAL: g3027.t1 original gene structure, not modified by PASA NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS gene 191 995 . + . ID=g3027;Name=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS mRNA 191 995 . + . ID=g3027.t1;Parent=g3027;Name=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS exon 191 294 . + . ID=g3027.t1.exon1;Parent=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS CDS 191 294 . + 2 ID=cds.g3027.t1;Parent=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS exon 436 565 . + . ID=g3027.t1.exon2;Parent=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS CDS 436 565 . + 0 ID=cds.g3027.t1;Parent=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS exon 834 995 . + . ID=g3027.t1.exon3;Parent=g3027.t1 NODE_4866_length_1184_cov_30.7971_potentialcontaminant AUGUSTUS CDS 834 995 . + 2 ID=cds.g3027.t1;Parent=g3027.t1 #PROT g3027.t1 g3027 FHDAILFFLRRCQAMLSRGYFEVGDRDLSLALVLSVLKQDPQHPGALLEYAIHTHEGKNVREAIAVLLRVVVATNQNEADTSSFLAKRAKLELARIASMEGSIGLLEAELGGASDSAPALAFLAASVKDFG # ORIGINAL: g11861.t1 original gene structure, not modified by PASA NODE_388_length_24986_cov_42.3005 AUGUSTUS gene 851 3595 . - . ID=g11861;Name=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS mRNA 851 3595 . - . ID=g11861.t1;Parent=g11861;Name=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 3252 3595 . - . ID=g11861.t1.exon1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 3252 3595 . - 0 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 2955 3026 . - . ID=g11861.t1.exon2;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 2955 3026 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 2627 2698 . - . ID=g11861.t1.exon3;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 2627 2698 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 2181 2283 . - . ID=g11861.t1.exon4;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 2181 2283 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 1918 2021 . - . ID=g11861.t1.exon5;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 1918 2021 . - 0 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 1484 1594 . - . ID=g11861.t1.exon6;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 1484 1594 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 1188 1259 . - . ID=g11861.t1.exon7;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 1188 1259 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 851 974 . - . ID=g11861.t1.exon8;Parent=g11861.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 851 974 . - 1 ID=cds.g11861.t1;Parent=g11861.t1 #PROT g11861.t1 g11861 MATSHSHVHRRIGRVRSCVSTFIAATAAAYVCIIALAVPSAAEAQGEHALEAVGGTSDVQRRGGAYGHHNPSLECAFNAKCECVSNLAGDVVRVSCAGARLTAVPQGIPSTTITLDLSNNKITNISRSDFQTLLALKVLNLRGNRLTAIYPLTFVDLENLERLDLSHNLIAELLFEPTELFERGLGPFEGLSNLRFLTLRANRLTEVPVTFAGHLSTTVYSVFFNLTSLVCLDLSRNKIESLREAAFGIGFYPFQGNNSYTGLPALRSLNLSRNRISSLESNTLSGQFSIEKLDFSFNRIEAFPDGFFTDLVSLERLVSVFAVYVTFNRPLNY* # ORIGINAL: g11863.t1 original gene structure, not modified by PASA NODE_388_length_24986_cov_42.3005 AUGUSTUS gene 8028 9429 . - . ID=g11863;Name=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS mRNA 8028 9429 . - . ID=g11863.t1;Parent=g11863;Name=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 9339 9429 . - . ID=g11863.t1.exon1;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 9339 9429 . - 0 ID=cds.g11863.t1;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 9029 9202 . - . ID=g11863.t1.exon2;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 9029 9202 . - 2 ID=cds.g11863.t1;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 8662 8832 . - . ID=g11863.t1.exon3;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 8662 8832 . - 2 ID=cds.g11863.t1;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 8028 8461 . - . ID=g11863.t1.exon4;Parent=g11863.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 8028 8461 . - 2 ID=cds.g11863.t1;Parent=g11863.t1 #PROT g11863.t1 g11863 MHLVPSLTFTSGIGFATAKALAAKGAHVILACRDATKALAACEKITEETGNKKVDFITVNLLSLTSVREFCRQFLAKNLPLHVLVNNAGIMMGSADGWYTEDGLGSVMQVNYYAHFLITITLLDVLATTPGGARVVNLASFAHRMGYIDHHNMDGAGLTGMLCYGQSKLAMAVFTNELARRLRAAKITSVTVNSADPGPVWSSFYDPLPWAIRTAFRPFLPLMSSSEIGAKTTVFLASSQEVQGRSGGYYENSTETKCSSASADEELGAALWAATVTRTHANTKLIKME* # PASA_UPDATE: g11866.t1, single gene model update, valid-1, status:[pasa:asmbl_6679,status:12],[pasa:asmbl_6680,status:12], valid-1 NODE_388_length_24986_cov_42.3005 . gene 14816 20218 . - . ID=g11866;Name=g11866.t1 NODE_388_length_24986_cov_42.3005 . mRNA 14816 20218 . - . ID=g11866.t1;Parent=g11866;Name=g11866.t1 NODE_388_length_24986_cov_42.3005 . five_prime_UTR 19976 20218 . - . ID=g11866.t1.utr5p1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 19678 20218 . - . ID=g11866.t1.exon1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 19678 19975 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 19489 19542 . - . ID=g11866.t1.exon2;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 19489 19542 . - 2 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 19248 19321 . - . ID=g11866.t1.exon3;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 19248 19321 . - 2 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 18891 19039 . - . ID=g11866.t1.exon4;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 18891 19039 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 18663 18755 . - . ID=g11866.t1.exon5;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 18663 18755 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 18337 18472 . - . ID=g11866.t1.exon6;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 18337 18472 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 18129 18217 . - . ID=g11866.t1.exon7;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 18129 18217 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 17815 17977 . - . ID=g11866.t1.exon8;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 17815 17977 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 17384 17680 . - . ID=g11866.t1.exon9;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 17384 17680 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 17106 17227 . - . ID=g11866.t1.exon10;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 17106 17227 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 16757 16877 . - . ID=g11866.t1.exon11;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 16757 16877 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 16382 16486 . - . ID=g11866.t1.exon12;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 16382 16486 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 16069 16190 . - . ID=g11866.t1.exon13;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 16069 16190 . - 0 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 15404 15775 . - . ID=g11866.t1.exon14;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 15404 15775 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . exon 14816 15225 . - . ID=g11866.t1.exon15;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . CDS 15027 15225 . - 1 ID=cds.g11866.t1;Parent=g11866.t1 NODE_388_length_24986_cov_42.3005 . three_prime_UTR 14816 15026 . - . ID=g11866.t1.utr3p1;Parent=g11866.t1 #PROT g11866.t1 g11866 MRRHSSEAAVDVESIPAAHEVEDGHDANGIAVESVAPGTSAPSSWKRKALSPFMQIVKVIWHTRQTEGLTETTTEKKKYISTTLREIFIYILYVSTLCIVVYGMLNSLSFTFTKSLQALFLDEETPNGNKWGDILTASDFWEYMTTVFVNGVYWEQWYNGDPFPYPGFIFGENYLMGVPQLRQVRVRNNTCSVHKDFRDIITECFASYSTTNEFKIPYGPNNTYVYHTGSELHGQSHWGEVSTYDAGGYTVALAKNSTATLAILQSLISNLWIDRGTRAVFVDFPVYNGNINLFCIIRMIAEFPSTGGVITTSQFHTVKLIRYVSSFDSFVMACEIIFVIFTAYYMIEEVFEIYKLRKQYFRSFWNWCELFILCLSIVCISFNVYRLSEVNRLLDSLIAAPNEYANFEKLAYWQIQYDNIIAITLFLVWIKFFKYISFNQTLSQLYTTLGMCARDLVGFAVMFFIVFLSYAQLGYLLFGAQLEQFKTFGQSIFTLFRIILGDFDFISIQVSNRILGPIYFVTFVFFVFFILMNMFLAIINESYVQVKEKMQWQAGESYFDFPGYIREQYESVLERLSLRKRQNEDLQRALEVADTNDNQVIEREELRLAGVRDAVANEMFKQFDTNNDNVLDIEEQTALRKHLHQSNVDIQKKVEEMQSQAKAKQQQKQQQQSQQQSQQQSQQPPGMSSRALRRARRQSNAPTLSNAALAQSNVGVYTEEEEDTDTEDLVKVLTTRVEKLENSLASIVSKMDTILNGLDRLDARGRVSSRQPSSDSAAASTRSGARLDGHAAGSSEA* # ORIGINAL: g11864.t1 original gene structure, not modified by PASA NODE_388_length_24986_cov_42.3005 AUGUSTUS gene 10066 11746 . + . ID=g11864;Name=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS mRNA 10066 11746 . + . ID=g11864.t1;Parent=g11864;Name=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 10066 10089 . + . ID=g11864.t1.exon1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 10066 10089 . + 0 ID=cds.g11864.t1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 10173 10396 . + . ID=g11864.t1.exon2;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 10173 10396 . + 0 ID=cds.g11864.t1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 10536 10650 . + . ID=g11864.t1.exon3;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 10536 10650 . + 1 ID=cds.g11864.t1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 10861 11000 . + . ID=g11864.t1.exon4;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 10861 11000 . + 0 ID=cds.g11864.t1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 11143 11245 . + . ID=g11864.t1.exon5;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 11143 11245 . + 1 ID=cds.g11864.t1;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 11414 11746 . + . ID=g11864.t1.exon6;Parent=g11864.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 11414 11746 . + 0 ID=cds.g11864.t1;Parent=g11864.t1 #PROT g11864.t1 g11864 MASKSQQKVLVIGGGGFLGRHIVELLLERNYAVNVFDMRETFKDANIKFFVGDLLNKNDVMPALQGVDFVIHCASPSPLSDNRALFYKVNVDGTKNLMDWCKESNVHRLVLTSSASVVFEGLVLKASDDGKFMTVAVRPHGIFGPRDPHLVPTLVETARAGKTKFMIGDGENLVDFTHVRNVAHAHIVAGESLKKGAKINGKAYNITNDEPIRFWDFLGRILTGLGYPAPQSKLPYRFVYVIAVILQFFCFILRPITVIKPTFTPMKVALAGTYHYYDCSAAKRDFGYKPIVKLSDGIADTLEHFRHLRNEN* # ORIGINAL: g11862.t1 original gene structure, not modified by PASA NODE_388_length_24986_cov_42.3005 AUGUSTUS gene 4873 7560 . + . ID=g11862;Name=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS mRNA 4873 7560 . + . ID=g11862.t1;Parent=g11862;Name=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 4873 5081 . + . ID=g11862.t1.exon1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 4873 5081 . + 0 ID=cds.g11862.t1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 5162 5288 . + . ID=g11862.t1.exon2;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 5162 5288 . + 1 ID=cds.g11862.t1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 5411 6300 . + . ID=g11862.t1.exon3;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 5411 6300 . + 0 ID=cds.g11862.t1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 6448 6665 . + . ID=g11862.t1.exon4;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 6448 6665 . + 1 ID=cds.g11862.t1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 6835 6960 . + . ID=g11862.t1.exon5;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 6835 6960 . + 2 ID=cds.g11862.t1;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 7217 7560 . + . ID=g11862.t1.exon6;Parent=g11862.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 7217 7560 . + 2 ID=cds.g11862.t1;Parent=g11862.t1 #PROT g11862.t1 g11862 MTADEEDTPMYLTAQAAWSFEKITPIVDDEALPLDERYVRFAEASATARATLDAIGVVTGADYWELAVSRHSSHVALEHVGAEEKYTYAQVDARANQVARWALAIGLKAGHVVALMCENRPEFIMVVMGLAKVGVTAALINTNLTAHMLHHPIAISCAKHIIVSTEKRTNWESARGLFSDADRPAVWWLPLEGATAEIPKGDASLTDAVSCLDTSRVSRSHRQHVHPRSPMFYIYTSGTTGKSKAAKFSHLRFIGAGLTWSAPCELTERDRYYITLPLYHGNAMVVAMSPVIYSGATAVIRTKFSASNFLADIRKYACTATIYIGELWRYMYVQPAKADDAVNPLRVAVGNGLRADIWAQICTRFGIRRVVEHYGATEMPGAAVLNWTNRVGSCGFVPPHLRCGPAGDRVVTYDVSSGTVSRDDRGLCIEALPGQEGELVMPLHDGRYDGYVDDSATARKVYSDVFATGDLWWASGDLLRIDDEGFYFFVDRAGDAFRWKGENVSTNDVCEIVAAFPSVTEANVYGVAVPGYDGKAGMASVVFSDKDSEPNFRRLYEHLTANLPSYARPLFVRIRSTENDKTSTFKFQKNLYSQQGFDPRSPDVHPDKLYFCDVAHGTYIPLTADVFDAICGVKYRL* # ORIGINAL: g11867.t1 original gene structure, not modified by PASA NODE_388_length_24986_cov_42.3005 AUGUSTUS gene 20880 23195 . + . ID=g11867;Name=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS mRNA 20880 23195 . + . ID=g11867.t1;Parent=g11867;Name=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 20880 20954 . + . ID=g11867.t1.exon1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 20880 20954 . + 0 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 21279 21341 . + . ID=g11867.t1.exon2;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 21279 21341 . + 0 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 21497 21621 . + . ID=g11867.t1.exon3;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 21497 21621 . + 0 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 21763 21860 . + . ID=g11867.t1.exon4;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 21763 21860 . + 1 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 22260 22299 . + . ID=g11867.t1.exon5;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 22260 22299 . + 2 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 22559 22650 . + . ID=g11867.t1.exon6;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 22559 22650 . + 1 ID=cds.g11867.t1;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS exon 22972 23195 . + . ID=g11867.t1.exon7;Parent=g11867.t1 NODE_388_length_24986_cov_42.3005 AUGUSTUS CDS 22972 23195 . + 2 ID=cds.g11867.t1;Parent=g11867.t1 #PROT g11867.t1 g11867 MVLYVIGLGLGDESDITVKGLEAVKSSARVFLEAYTSILGVSKEKLEAYYSKSVTIADRECVESGCDVILDGADTENVAFLVVGDPFGATTHSDLILRARSRKIPVKVIHNASIMNAIGCYIKVKEPDFEALIRGKKVYEPPRFMTVNQAAEILLKVAESRSEPAYGPDTLCVGLARVGQETQTIISGTLRQLLDADFGPPLHALVISGNMHFLEAEMVATFAVNPDDFKPFMEESHH* # PASA_UPDATE: g11868.t1, single gene model update, valid-1, status:[pasa:asmbl_6683,status:12], valid-1 NODE_388_length_24986_cov_42.3005 . gene 23629 24878 . + . ID=g11868;Name=g11868.t1 NODE_388_length_24986_cov_42.3005 . mRNA 23629 24878 . + . ID=g11868.t1;Parent=g11868;Name=g11868.t1 NODE_388_length_24986_cov_42.3005 . exon 23629 24750 . + . ID=g11868.t1.exon1;Parent=g11868.t1 NODE_388_length_24986_cov_42.3005 . CDS 23629 24750 . + 0 ID=cds.g11868.t1;Parent=g11868.t1 NODE_388_length_24986_cov_42.3005 . exon 24852 24878 . + . ID=g11868.t1.exon2;Parent=g11868.t1 NODE_388_length_24986_cov_42.3005 . CDS 24852 24878 . + 0 ID=cds.g11868.t1;Parent=g11868.t1 #PROT g11868.t1 g11868 MEALVDVDALPVSAIESNPHSCDATTLIVPVPSLPLVDPAQIALAGSAEAAAGFAKERIVALACPAEVSDVHSAGGFVVDATVVDGGDALPTKDHATVADNVKSHNAFVIASAPAAADAGSPVDGEAVIVGSSLSTTHGGHALVSPAAETDSLARLVFDGPSGMLGEWMDRCVAASSVADEGAWEMTGCGRVRETICELRRLVADNTSHVLAMVTEAELKPKGWIPGVGGSYVWLEKSHLLFQRNALALDAIEQTAFPLTFAAVAHDFDRSMPGNGYRSLLSVVVACMNKLIVKHRAFAAARDGLLFRSQSHFERVQDYLRMLEMMAVILNLARDLANGSVAGCLFQLTPDPLIVQGLEEMRKDVFYGKRFGFQRTSQSPSN* # PASA_UPDATE: g11865.t1, single gene model update, valid-1, status:[pasa:asmbl_6681,status:12],[pasa:asmbl_6682,status:12], valid-1 NODE_388_length_24986_cov_42.3005 . gene 11866 13193 . - . ID=g11865;Name=g11865.t1 NODE_388_length_24986_cov_42.3005 . mRNA 11866 13193 . - . ID=g11865.t1;Parent=g11865;Name=g11865.t1 NODE_388_length_24986_cov_42.3005 . five_prime_UTR 13065 13193 . - . ID=g11865.t1.utr5p1;Parent=g11865.t1 NODE_388_length_24986_cov_42.3005 . exon 11866 13193 . - . ID=g11865.t1.exon1;Parent=g11865.t1 NODE_388_length_24986_cov_42.3005 . CDS 12195 13064 . - 0 ID=cds.g11865.t1;Parent=g11865.t1 NODE_388_length_24986_cov_42.3005 . three_prime_UTR 11866 12194 . - . ID=g11865.t1.utr3p1;Parent=g11865.t1 #PROT g11865.t1 g11865 MSTQTQSSSPVSPDSPHMMPVTFREMENPKLSALKASDGHRTHGSSMSPRSSPYDPKMRVVRRRQFICIHNDCRKPRPNKKSNVETHVWTQHVRRTIGMPNAPYVANQYQHLVMPYMMPVDEVVQLEKEAAPLFVLANATPLSEYLSKIGKTDYIEKFAYIPRKQGHGSVLSTPVHSDDDASSVAGSYGVRSREVTPAPNETDSGHHSDDESVHVVPEVAQHSQQMQQNAQQHYYNLQAHQAHQTHMAQAQAQYRRPVLNAKPRSAPTADSSLEVLSRAATGEPVWRPW* # PASA_UPDATE: g3144.t1, single gene model update, valid-1, status:[pasa:asmbl_3599,status:12], valid-1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . gene 2 7461 . + . ID=g3144;Name=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . mRNA 2 7461 . + . ID=g3144.t1;Parent=g3144;Name=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 2 4377 . + . ID=g3144.t1.exon1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 2 4377 . + 0 ID=cds.g3144.t1;Parent=g3144.t1;5_prime_partial=true NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 4613 4763 . + . ID=g3144.t1.exon2;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 4613 4763 . + 1 ID=cds.g3144.t1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 5015 5229 . + . ID=g3144.t1.exon3;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 5015 5229 . + 0 ID=cds.g3144.t1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 5452 6109 . + . ID=g3144.t1.exon4;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 5452 6109 . + 1 ID=cds.g3144.t1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 6265 6459 . + . ID=g3144.t1.exon5;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 6265 6459 . + 0 ID=cds.g3144.t1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 6913 7062 . + . ID=g3144.t1.exon6;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 6913 7062 . + 0 ID=cds.g3144.t1;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . exon 7210 7461 . + . ID=g3144.t1.exon7;Parent=g3144.t1 NODE_2135_length_7560_cov_42.4899_potentialcontaminant . CDS 7210 7461 . + 0 ID=cds.g3144.t1;Parent=g3144.t1 #PROT g3144.t1 g3144 SPACATAQLAYMSPEQTGRMNRHIDYRTDFYSLGVTLYEVLAGRLPFTGRDAIEFVHCHIAKIAKPLHVVDPKIPRAISDIIAKLMAKTAEDRYQSALGLLADLEQCLARLGPDWDSRPQAANAVHDFVAGLMDRRSQFVLPQKLYGRETEVARLFSAFQRVAMVGSVETIFVRGYSGIGKSSVVNEVHKPIVAARGYFAAGKFDQFRRQQSALLQALRELVRALLSEGESTIMHWRQRMHQRLGANARLITDVVPEVEHLVGRPPPVPELGPSESQNRFERVFRQFIGVFCTPDHPLVVFLDDLQWVDPASLRLLRIVMSDPDVKNFLLIGAYRDNEVPDSHPLAIAIDELRKEGTAISEIVIQPLQRDHVISLVRDTLQCATDAAETQVLMCDQLATLVHERTGGNPFFVTQLLKSLHQDGLILFDFTTGHWTVDIRRVALSHVTSNVVELMVSRIQRLSQSTQHILSVAAAVGARFSAVSLATAADTDPQEVARRLWPALEAGLILPLSGDYNILVEWEGPLEQLLEDRSVEIAGYRFQHDRVQQAAYSLVAEERRRDLHLSIGRRMLKSLAGDAKALEEQLLEIVNQVNVGKELITDDAERIELARLNLRAGRKAYKATAYAPAVVYHGVARALLPADAWESHFDLGWEILMGLALSEFVNTDYAAAEATCEALLDMARDVLQSAGVYELQMQFLIQQHRMQEALDIGLKTLNMLSIDLVTSRPKVPTAAELAAIGDMVLPAKLAGMRVLMNLCAPTYVLDPNLNARVALTMVDLTNRYGTSRIAAFALGLYGLISFLFDLDDGYNAGLLSLKLCEQYDATELYAKVSGLFYAHVFVWRSPIRDTVDHLQRGVITGLETGDIEWAGYDSFYTCDAMFFGGFPLVEVGKRQHALISGLIQRHQVLQSTYLNIWRRHTHKLLSGEWEEEYTFFERTVTDDQMIDELIKAKNHMFAFTAFLARGMLNYHMGRFANAVDDLRDAKAHAGGVVGMLTNGMHNFFYSLAVLAHARSLPNRSTSVNTARSVVADESISYEAAVAAVSAHTCPPADEMSVADALSVAQCNQTLMRKWAAACPSNWEHKHALVSAEIARLCGESGIAMKAYAAAIRSASEGGYTKEASMANELAAEFFGETGEQLAQREYFGQAFYGYLQWGGRLLLRKLEAMWPDFVVSDMGADRGDMEGASGASGKMVWRPRANTVSESGLHRRADDPSMSSINNNGSGGGMRTFPEIEVEGFGELTSGSGTGEELDMETIVKVSQVLSGEIQLDQLMKKLMAIVIENACADRGILLLPRDGELFVESVACVEGGGEVDVSVQLNIALSDYADIPMAVINYALATQQPVVIDQSAEPGSDQLLADKYFVLYHPKSVLCSPIVYLGSVVGLIYLENSVVSGVFHKDRLALISILSSQLGISLRNAQLFQEVRENNSFLEGVLQHMQDAVVVLDSRLQVTLANRCFFDRFNLDSQTSIGSSFFDIGDKDWDVPGLKHKLQQLLVDETHTIQSLEIDKNFRHGRSCLLINATRFEREAEGGEPLVLVTMYDVTDRRRIMELELLAKDLARMIEDANVPIFGIDTRECINEWNRKASWLTGFSAQEVIGLSLLDDVIADETVNEKLRGVFRRAYVGEGTSNIEVRLRTKTGVLIDLSINASPRVDHAGNVVGVVCVGQDITERKRGEGTLKEGIVHTLASYLPRMVLDKYAKDPQLPRNPPIADRFQGSALFVDVSGFTPLTSRLAMEAVDGAEQIGKLLNANFDRLIPVIIANGGDVVKFAGDAILAVFPTSEDVDLKTSAVYAIQCGLALGDSIEGGESTIGSLPMKVGIGVGEFQAVHFGGFNDVWQCLVLGPPLAQMAAAEKSAKSGQLVVSPETWELVSEVCVGEVLTETGLEPNIGCVAVYALREPLPPHPPEPMQVALVMEPSLRAYVNPEVLPFLYENQTAWMTELRSVTNVFARVSGFDYSRGALSTSDLVRLQSMLVAVQRILADFGGSMAKVSG* # ORIGINAL: g534.t1 original gene structure, not modified by PASA NODE_3260_length_3890_cov_39.3954 AUGUSTUS gene 1633 2356 . - . ID=g534;Name=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS mRNA 1633 2356 . - . ID=g534.t1;Parent=g534;Name=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS exon 2318 2356 . - . ID=g534.t1.exon1;Parent=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS CDS 2318 2356 . - 0 ID=cds.g534.t1;Parent=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS exon 1898 2062 . - . ID=g534.t1.exon2;Parent=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS CDS 1898 2062 . - 0 ID=cds.g534.t1;Parent=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS exon 1633 1686 . - . ID=g534.t1.exon3;Parent=g534.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS CDS 1633 1686 . - 0 ID=cds.g534.t1;Parent=g534.t1 #PROT g534.t1 g534 MVQCTIFEHGYQCDVVLGVRRAMGILSLCGTVLVISLIIAFKRYRRFPQRTILALNVATMAETLAYIMSKGIDYIGCVRAWLFPA* # ORIGINAL: g535.t1 original gene structure, not modified by PASA NODE_3260_length_3890_cov_39.3954 AUGUSTUS gene 3165 3701 . - . ID=g535;Name=g535.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS mRNA 3165 3701 . - . ID=g535.t1;Parent=g535;Name=g535.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS exon 3165 3701 . - . ID=g535.t1.exon1;Parent=g535.t1 NODE_3260_length_3890_cov_39.3954 AUGUSTUS CDS 3165 3701 . - 0 ID=cds.g535.t1;Parent=g535.t1 #PROT g535.t1 g535 MFFHSHARFHQLNRIIARPLATQLSAIIAAARLYKALRSFDASQRVRWSISPSLPDMFDGESDIIGRRPRSMLSYCTVVGWGASDDGAGCGRPSSRIETIAVSVPPPPPLKRITSRARAAAAPPPPKLQLCEESGEGEGDYVYADCSHLPGTVPTGDTGVDGLCQDIELPDDDAEIQV* # PASA_UPDATE: g11856.t1, single gene model update, valid-1, status:[pasa:asmbl_2044,status:12], valid-1 NODE_1587_length_10348_cov_37.6042 . gene 289 952 . - . ID=g11856;Name=g11856.t1 NODE_1587_length_10348_cov_37.6042 . mRNA 289 952 . - . ID=g11856.t1;Parent=g11856;Name=g11856.t1 NODE_1587_length_10348_cov_37.6042 . five_prime_UTR 671 952 . - . ID=g11856.t1.utr5p1;Parent=g11856.t1 NODE_1587_length_10348_cov_37.6042 . exon 544 952 . - . ID=g11856.t1.exon1;Parent=g11856.t1 NODE_1587_length_10348_cov_37.6042 . CDS 544 670 . - 0 ID=cds.g11856.t1;Parent=g11856.t1 NODE_1587_length_10348_cov_37.6042 . exon 289 419 . - . ID=g11856.t1.exon2;Parent=g11856.t1 NODE_1587_length_10348_cov_37.6042 . CDS 289 419 . - 2 ID=cds.g11856.t1;Parent=g11856.t1;3_prime_partial=true #PROT g11856.t1 g11856 MASAQAQRLEELRRASTFVKDFNQLWSKGGELDQEVDDDLARAQKQLNDLKHKISVHSKQNFALEKDVRYLDSRIALLINHRISFE # PASA_UPDATE: g11857.t1, single gene model update, valid-1, status:[pasa:asmbl_2043,status:12], valid-1 NODE_1587_length_10348_cov_37.6042 . gene 1919 8880 . + . ID=g11857;Name=g11857.t1 NODE_1587_length_10348_cov_37.6042 . mRNA 1919 8880 . + . ID=g11857.t1;Parent=g11857;Name=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 1919 2214 . + . ID=g11857.t1.exon1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 1919 2214 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 2426 2558 . + . ID=g11857.t1.exon2;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 2426 2558 . + 1 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 2733 2903 . + . ID=g11857.t1.exon3;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 2733 2903 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 3040 4122 . + . ID=g11857.t1.exon4;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 3040 4122 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 4316 4432 . + . ID=g11857.t1.exon5;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 4316 4432 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 4878 6347 . + . ID=g11857.t1.exon6;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 4878 6347 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 6587 7100 . + . ID=g11857.t1.exon7;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 6587 7100 . + 0 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 7378 7611 . + . ID=g11857.t1.exon8;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 7378 7611 . + 2 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 7846 7954 . + . ID=g11857.t1.exon9;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 7846 7954 . + 2 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . exon 8103 8880 . + . ID=g11857.t1.exon10;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . CDS 8103 8229 . + 1 ID=cds.g11857.t1;Parent=g11857.t1 NODE_1587_length_10348_cov_37.6042 . three_prime_UTR 8230 8880 . + . ID=g11857.t1.utr3p1;Parent=g11857.t1 #PROT g11857.t1 g11857 MIPNASPRGPQSVPETPLAGAAASASTEAPSRRSLLSDSGTDLVAGTRVGTELSRAGAVDAPPTTPPPAEASSGLIRRPSLALRRDSPSGLVRRDSASGEVADLVFLPEVTENAVVDALVRRYNHSRIYTYVGDVVLSLNPFKAVDIYGDKEISMFRDNVFYSNKPPHIYALANRAYRNVVRTNQNQCVLITGESGSGKTEASKIIVGYLAAVTAVPGAASSIDGIRRVLIESNPALEALGNAQTASNDNSSRFGKYFEIALDHRGCPVGGHVQTYLLEKTRVTGQAEGERNFHAFYQLLAGADDALVQSLSLAREPKAYRYLKHGNGEGKRPVDDAAGFSLTRRALDAMGMSLDDVHLVYTVLAAILHIGNVRFASHGSASGASARSSDSDAPSPVGSPTALRRSRTTTPDGAAAAAEIRAEGHFERGCALLQCDAEVVRVALTRRTVDVNARDAAECIEIPLDRRQARDARDALCRALYLRLFEWVVAKINISMSAERVRGAVHSGADGGGGGVGDCHAGSRQSPSPQPPCMSPRSPRSSTPRSPVIGILDIYGFEIFKQLFVRLTLGAEQAEYAEEGIPWVHVDYFNNELICELIDKKPTGIIPILDEECLLGDKTHFSLVQKLNSNCLRHPNYEQKVLSRKHGTTGFILKHYAGTVTYQANDFLKKNRDALHRDIIEALASSSSVANSRVLAALFEDPEALGSPQVARNAGSPLDAVARQHASSSSRTRRQSSLGGPASEAAAGTAQILRRKSTMNLATPVARKSSGVGDKRRPKTVAAQFRTQLGGLIDALAACSPHYVRCIRPNAGRVPAVADEALVRSQVRYLGVLENVRVRRAGYCFRQPHDRFVARYCMLSAVTWPSFRPVAGAPDALREAVVAIMNQVGITQSEYAFGRTKVFVREATTMLFVEELRDRALPWVAVILQRNWRGLARRLWLRRYRAARRIQARWRGFVCRRAYVRKRAATLLQAHVRGHLVRRRLRMGKAATVIAKRWRGFSTRRKMFRAKALLLVGSLILQAVLRKRFVKMRAQTRAARTIQRHVRGFLVRKNLHKIKAAITIQMHYRRYLARRCKAAVVLQSRWRGRKLRAAFVSQRRAVLLMQCAWRFVRVRRAVCTLQKHYRGHRARCFFLRHKRAAMRIQAALRAYKARIYFELLSRAFVAGGSWNRKGFPQPPSVLRRTVDMLDLRSKWKVALARRFIGTIMEQEKMLWMQRKVCASELFRGKKAGYANSVAEVFGGDYLRLAKGAMSQARKSASADDDPASIALSVSAMFSDIANKVNRNWRLDAAAIAISADALFRLQPKTLRVKERISLTQLQEVAMSPYADSLVIFKFAERHYIFECRRHVELITMLSEAYQKCTRLPLRVTFSDVHDTYMAQQPWKVHFQGDKSAKTPRIQQKDKSTILIIVPTTL* # PASA_UPDATE: g11858.t1, single gene model update, valid-1, status:[pasa:asmbl_2045,status:12], valid-1 NODE_1587_length_10348_cov_37.6042 . gene 8267 10250 . - . ID=g11858;Name=g11858.t1 NODE_1587_length_10348_cov_37.6042 . mRNA 8267 10250 . - . ID=g11858.t1;Parent=g11858;Name=g11858.t1 NODE_1587_length_10348_cov_37.6042 . five_prime_UTR 10198 10250 . - . ID=g11858.t1.utr5p1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . five_prime_UTR 10076 10111 . - . ID=g11858.t1.utr5p2;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . exon 10198 10250 . - . ID=g11858.t1.exon1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . exon 9812 10111 . - . ID=g11858.t1.exon2;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . CDS 9812 10075 . - 0 ID=cds.g11858.t1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . exon 9524 9625 . - . ID=g11858.t1.exon3;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . CDS 9524 9625 . - 0 ID=cds.g11858.t1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . exon 8946 9271 . - . ID=g11858.t1.exon4;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . CDS 8946 9271 . - 0 ID=cds.g11858.t1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . exon 8267 8693 . - . ID=g11858.t1.exon5;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . CDS 8450 8693 . - 1 ID=cds.g11858.t1;Parent=g11858.t1 NODE_1587_length_10348_cov_37.6042 . three_prime_UTR 8267 8449 . - . ID=g11858.t1.utr3p1;Parent=g11858.t1 #PROT g11858.t1 g11858 MRDEKEAAHERQIAELHKKTAALVAEYEQKIAAAATEQERESLRKQSLEMQAQAEKFAQKERELREKKEKYPRWNSRTLCQDGTVGKTVINKYDNDAGALKPPEMDTSLPEEEAAADFERKVDEWAQAMDALVADFGKIASLKESYEFISAHPGVLADECADALCLMAVDCFVRQYYDVMKDEKEVDCAVLDKGPKCEGRRLLFQSLVLSYCIDLTKAGNGKDGVILFFKRMHGQDNEHRDAFQKDLERIQLTAQRQAKERLDKAIDEARARRTQEVEEEMAQFKRNTKRLFVVAAILIACLAIFLARYVA* # ORIGINAL: g13446.t1 original gene structure, not modified by PASA NODE_5127_length_1009_cov_37.3779 AUGUSTUS gene 483 734 . - . ID=g13446;Name=g13446.t1 NODE_5127_length_1009_cov_37.3779 AUGUSTUS mRNA 483 734 . - . ID=g13446.t1;Parent=g13446;Name=g13446.t1 NODE_5127_length_1009_cov_37.3779 AUGUSTUS exon 483 734 . - . ID=g13446.t1.exon1;Parent=g13446.t1 NODE_5127_length_1009_cov_37.3779 AUGUSTUS CDS 483 734 . - 0 ID=cds.g13446.t1;Parent=g13446.t1 #PROT g13446.t1 g13446 MQHARDDTHSHQTQILRSCAKPGFEVPDPLSIMLDPGLVDRHARQSQAIIVHAEPDLGAVDADNVMRPGTMNPMVRALWKAAG* # ORIGINAL: g2447.t1 original gene structure, not modified by PASA NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS gene 1121 2502 . - . ID=g2447;Name=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS mRNA 1121 2502 . - . ID=g2447.t1;Parent=g2447;Name=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS exon 2007 2502 . - . ID=g2447.t1.exon1;Parent=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS CDS 2007 2502 . - 0 ID=cds.g2447.t1;Parent=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS exon 1446 1908 . - . ID=g2447.t1.exon2;Parent=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS CDS 1446 1908 . - 2 ID=cds.g2447.t1;Parent=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS exon 1121 1286 . - . ID=g2447.t1.exon3;Parent=g2447.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS CDS 1121 1286 . - 1 ID=cds.g2447.t1;Parent=g2447.t1 #PROT g2447.t1 g2447 MQAAHTKGTCCAVIATELSASETRTAGADGAHSNAYPGAGGYSYSSHDDFDDRARERSRQRPSPTLEERVDMLEQRVSIHFTAMTDFRADINKMFCDMFRMQSELTSELRRVPSRTQELQHPERQHPQQQMHTNARQDLLPIQRPHDQLTSTQAAQPPPQQEMHAEAARQGGVARKVPKEVVHRTVVSAVVRDAALLGKAKGTPSVDVEAAPAGALAVRVSNNHDDKTGNGRADMVGIAARETDCAMIQSTDNAASATDVRAEISPTKTAYSRKPPTLRRADKKSKFQDGPSAARNNPKDMNKDNDDNATLTGPRTTDLREIIHLARLSVKNLQMKRRKQQPSLSIICSKEVMNFDNTTCLYPGCKRNSVPLSR* # ORIGINAL: g2446.t1 original gene structure, not modified by PASA NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS gene 502 813 . - . ID=g2446;Name=g2446.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS mRNA 502 813 . - . ID=g2446.t1;Parent=g2446;Name=g2446.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS exon 502 813 . - . ID=g2446.t1.exon1;Parent=g2446.t1 NODE_2278_length_6939_cov_29.0251_potentialcontaminant AUGUSTUS CDS 502 813 . - 0 ID=cds.g2446.t1;Parent=g2446.t1 #PROT g2446.t1 g2446 MDHEYRKHPRQVWRRYVAELLKLKLPPRKRLPKIVADQVDMAVANGDFSDVDDSCEHDSGENKRDSDGSEDSDDLDDSDGSGDSNDSDDPGDSQFTQDPSNAE* # PASA_UPDATE: g11389.t1, single gene model update, valid-1, status:[pasa:asmbl_2398,status:3], valid-1 NODE_1705_length_9589_cov_41.031 . gene 2392 4625 . - . ID=g11389;Name=g11389.t1 NODE_1705_length_9589_cov_41.031 . mRNA 2392 4625 . - . ID=g11389.t1;Parent=g11389;Name=g11389.t1 NODE_1705_length_9589_cov_41.031 . five_prime_UTR 4436 4625 . - . ID=g11389.t1.utr5p1;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . exon 3795 4625 . - . ID=g11389.t1.exon1;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . CDS 3795 4435 . - 0 ID=cds.g11389.t1;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . exon 3326 3590 . - . ID=g11389.t1.exon2;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . CDS 3326 3590 . - 1 ID=cds.g11389.t1;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . exon 2392 3206 . - . ID=g11389.t1.exon3;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . CDS 2802 3206 . - 0 ID=cds.g11389.t1;Parent=g11389.t1 NODE_1705_length_9589_cov_41.031 . three_prime_UTR 2392 2801 . - . ID=g11389.t1.utr3p1;Parent=g11389.t1 #PROT g11389.t1 g11389 MCAHHQAVGRGRHSLGSLAVVLALSSALCLALYLWDGADTVGVTSPSAPQSHDNNLVRSVDENPLDDDPMRGANAIDGSQRGHVAARESRGLPAPPFGPCLAGFVPRASPVQSARAADGAGSGARGRGHACVACPAGSFSLAGWSECQPLLGCDDISEHVVDRVFVVNGGVKSIHRAQLLIRGGGPELKRPVMFATCHSPHAAEDFLLGIEMLKKLSPHPNIVQIVGFCERRRNAQLVTEWLPHGSANSLDGLLDGRRDAWLLRRRLALDYLRAIAHLHAGPTGTYVMCDSNTPQKTLTQFLVTPDVRLKLNDVDAVPEVRRPHLLVKCGHRRLGGRFVAPEQHWPWPGKPFSDADMPGYDEKTDIWKVPDTIELLLDHGRNGGALNETALAVVDGIRERCKRGLPSQRPDAVALLGMYRDALACGDACTPVLAAL* # ORIGINAL: g11391.t1 original gene structure, not modified by PASA NODE_1705_length_9589_cov_41.031 AUGUSTUS gene 7135 8044 . + . ID=g11391;Name=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS mRNA 7135 8044 . + . ID=g11391.t1;Parent=g11391;Name=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS exon 7135 7285 . + . ID=g11391.t1.exon1;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS CDS 7135 7285 . + 0 ID=cds.g11391.t1;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS exon 7377 7435 . + . ID=g11391.t1.exon2;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS CDS 7377 7435 . + 2 ID=cds.g11391.t1;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS exon 7604 7793 . + . ID=g11391.t1.exon3;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS CDS 7604 7793 . + 0 ID=cds.g11391.t1;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS exon 7917 8044 . + . ID=g11391.t1.exon4;Parent=g11391.t1 NODE_1705_length_9589_cov_41.031 AUGUSTUS CDS 7917 8044 . + 2 ID=cds.g11391.t1;Parent=g11391.t1 #PROT g11391.t1 g11391 MASPAGRVYQHAADILDRIRARRGTAKSLCLGAPIEEKKKLYALVCETVKYVPVLDEVMEEAEVSSSLKGMKRSMQQVLVYDMLIGRGIQCGGKLKRMLAPHKPRLDAALARLLVRRGVHEASALVVSAARMAAEATPRYVRVNNIKWAMDSAVACFVAEGYALVDPPQPITALV* # PASA_UPDATE: g11388.t1, single gene model update, valid-1, status:[pasa:asmbl_2397,status:12], valid-1 NODE_1705_length_9589_cov_41.031 . gene 155 2042 . - . ID=g11388;Name=g11388.t1 NODE_1705_length_9589_cov_41.031 . mRNA 155 2042 . - . ID=g11388.t1;Parent=g11388;Name=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 1866 2042 . - . ID=g11388.t1.exon1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 1866 2042 . - 0 ID=cds.g11388.t1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 1379 1646 . - . ID=g11388.t1.exon2;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 1379 1646 . - 0 ID=cds.g11388.t1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 1244 1294 . - . ID=g11388.t1.exon3;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 1244 1294 . - 2 ID=cds.g11388.t1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 977 1089 . - . ID=g11388.t1.exon4;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 977 1089 . - 2 ID=cds.g11388.t1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 631 713 . - . ID=g11388.t1.exon5;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 631 713 . - 0 ID=cds.g11388.t1;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . exon 155 500 . - . ID=g11388.t1.exon6;Parent=g11388.t1 NODE_1705_length_9589_cov_41.031 . CDS 155 500 . - 1 ID=cds.g11388.t1;Parent=g11388.t1;3_prime_partial=true #PROT g11388.t1 g11388 MKTVDSSYLTKQLICNRLATDGDIVLGMAADMTEMTTKATGFAFWRDVLRGAKYVVAPMVDQSELPWRMLCRRYGAELCYTPMIHAGLFCSNERYRSEFFSTCPEDRPLIVQFCANDPDILLRAAKMVEHQCDGVDINLGCPQHIARRGRYGAYLMDEWELIARMVSTLHKHLSVPVTCKIRVFPSIDKTLAYAKMIEAAGCQLLTVHGRTRDQKGHNTGMADWNAIKAVRESVSIPVYANGNILEFEDIARCMEHTGVQGVMSAEGNLANPALFAGINPPVWQMAREYLDECDKFPASLSMVRGHMFKIMRVPLTTYTDLRDRLGMSKSRADIDAIVDEMAARLQ # PASA_UPDATE: g11390.t1, single gene model update, valid-1, status:[pasa:asmbl_2399,status:3], valid-1 NODE_1705_length_9589_cov_41.031 . gene 5179 6829 . - . ID=g11390;Name=g11390.t1 NODE_1705_length_9589_cov_41.031 . mRNA 5179 6829 . - . ID=g11390.t1;Parent=g11390;Name=g11390.t1 NODE_1705_length_9589_cov_41.031 . five_prime_UTR 6567 6829 . - . ID=g11390.t1.utr5p1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . exon 6343 6829 . - . ID=g11390.t1.exon1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . CDS 6343 6566 . - 0 ID=cds.g11390.t1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . exon 6055 6112 . - . ID=g11390.t1.exon2;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . CDS 6055 6112 . - 1 ID=cds.g11390.t1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . exon 5658 5697 . - . ID=g11390.t1.exon3;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . CDS 5658 5697 . - 0 ID=cds.g11390.t1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . exon 5421 5453 . - . ID=g11390.t1.exon4;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . CDS 5421 5453 . - 2 ID=cds.g11390.t1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . exon 5179 5336 . - . ID=g11390.t1.exon5;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . CDS 5266 5336 . - 2 ID=cds.g11390.t1;Parent=g11390.t1 NODE_1705_length_9589_cov_41.031 . three_prime_UTR 5179 5265 . - . ID=g11390.t1.utr3p1;Parent=g11390.t1 #PROT g11390.t1 g11390 MEVAWTLCPCSEEHGTCVLGHLRYCTHDAAQHCLRQPPMTIRATCFRIACVSQHCRSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFRVPAATSAIITNDGVGINPAQSAGNVFLKHGSELRLIPRDRVGCGL* # PASA_UPDATE: g2825.t1, single gene model update, valid-1, status:[pasa:asmbl_8767,status:12], valid-1 NODE_6685_length_525_cov_45.84_potentialcontaminant . gene 1 525 . - . ID=g2825;Name=g2825.t1 NODE_6685_length_525_cov_45.84_potentialcontaminant . mRNA 1 525 . - . ID=g2825.t1;Parent=g2825;Name=g2825.t1 NODE_6685_length_525_cov_45.84_potentialcontaminant . exon 1 525 . - . ID=g2825.t1.exon1;Parent=g2825.t1 NODE_6685_length_525_cov_45.84_potentialcontaminant . CDS 1 525 . - 0 ID=cds.g2825.t1;Parent=g2825.t1;5_prime_partial=true;3_prime_partial=true #PROT g2825.t1 g2825 KPQDIFDALDSDNSFGNYVGNVDHLLDPAFIRYLFEEQSSGTRAGAQMVATSLSRPLTMADLLSRTPETLSVALFVSGVTDASVRDEWQAFRMLCKRHDVTACRVDALNVEAAARTRRFEFVYVACHGDIRSGLELGSEGYLHWRDFAAALASHELPSLVVLNGCFTASAAKELN # ORIGINAL: g12109.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 55529 59581 . + . ID=g12109;Name=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 55529 59581 . + . ID=g12109.t1;Parent=g12109;Name=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 55529 55696 . + . ID=g12109.t1.exon1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 55529 55696 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 55780 55935 . + . ID=g12109.t1.exon2;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 55780 55935 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 56098 56191 . + . ID=g12109.t1.exon3;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 56098 56191 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 56301 56459 . + . ID=g12109.t1.exon4;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 56301 56459 . + 2 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 56573 56835 . + . ID=g12109.t1.exon5;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 56573 56835 . + 2 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 56928 57014 . + . ID=g12109.t1.exon6;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 56928 57014 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 57090 57215 . + . ID=g12109.t1.exon7;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 57090 57215 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 57316 57492 . + . ID=g12109.t1.exon8;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 57316 57492 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 57582 58177 . + . ID=g12109.t1.exon9;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 57582 58177 . + 0 ID=cds.g12109.t1;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 58342 59581 . + . ID=g12109.t1.exon10;Parent=g12109.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 58342 59581 . + 1 ID=cds.g12109.t1;Parent=g12109.t1 #PROT g12109.t1 g12109 MMPIGGSAQSPAEVRMFESSFAVLRPLCAKLAAEPSLDMLDLLAVTWPALPAEAVQDILDYIIFPLHLTLRRPGIVEAVFISALDQLTALLTEHHVTNATMFYDLFDDLSVAIKHGSEERQRSSLVAMRVLSACLGDTSGSLRAQVVSDQKWMPRFGFVISNLLDVARETKSKELRVLAVECIGRLVRDICHAPSVAPFLPGIAGGVGGLVCGDYKLGSRTFCVSLDTLAAAIALSLADERWEGMPDAESTRVWALDAAARLSVLVRRVASLRVGHPSAKVREALVCFSAALLERCWVTMEASLPAMVEVVVALSADDVPTVSAKAGALLLRLQQRPGAITESLPLLACIEDNLAALLLSLPRTVMAGDDATKRNACLALAGYLDVLGDRLLPFLSAPGMAERLVSALVQVLDVESYDVSVLEGDRDYPLGAALRTIGDGFAHHVRRRFRLFSSDGVRDTLARVCRSVACGRSFAPVMERLRPRIARGSLHARAAGCIVVAFAFSSPHLSDREAMNCSAQRESAVASLLPDLFLCASFARDVDVREGYVLACAALDAVGACVECMGTRFQKHVMGVLYSTVGLAGDEDGRIAQSARRALQSMCGACGYTNASALICENADYIVDSTALMLRRGETSGEASRVLAATLALGGPALVPFLDDVLAAVLTSMDPADANLTQTSAMTLVAVLRALEVWALKECELGGIATTTNESKRDTVVAVGSVLARLCARSAKTTAGSARDAADDDATGDAPGGESTHDADVPDGEDGTRGDPDRKAAPGVTALVSRAMDAILPLLGWEPRLRRAALAGCGHALGALHAAGATTDFLPAVHRTWSPIAPCLADGDALVVAAAAGVLSSVCRTARDFVRTRFVRDVWPHLRGRLLRARQSDGTWQSTDPHARVVRVDVALFGLLCAAANADVLDEPTRKAALVMCAGHLVAGDAVEDRQRACAEAMAALAADDVDSAWLCIAATGCAGARGPSVSASPALEPVFGVPWEGRAAPCGESAACRGLHAIIPTVER* # PASA_UPDATE: g12112.t1, single gene model update, valid-1, status:[pasa:asmbl_9465,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 64093 66055 . + . ID=g12112;Name=g12112.t1 NODE_7_length_79538_cov_50.0942 . mRNA 64093 66055 . + . ID=g12112.t1;Parent=g12112;Name=g12112.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 64093 64155 . + . ID=g12112.t1.utr5p1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 64093 64188 . + . ID=g12112.t1.exon1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 64156 64188 . + 0 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 64378 64469 . + . ID=g12112.t1.exon2;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 64378 64469 . + 0 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 64618 64738 . + . ID=g12112.t1.exon3;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 64618 64738 . + 1 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 65037 65113 . + . ID=g12112.t1.exon4;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 65037 65113 . + 0 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 65294 65471 . + . ID=g12112.t1.exon5;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 65294 65471 . + 1 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . exon 65659 66055 . + . ID=g12112.t1.exon6;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . CDS 65659 65817 . + 0 ID=cds.g12112.t1;Parent=g12112.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 65818 66055 . + . ID=g12112.t1.utr3p1;Parent=g12112.t1 #PROT g12112.t1 g12112 MGDDRQGFLDKAKENVTTAFAIAKVVAYATYRRVFKMEDAMRPEISVVAVGLDGTGKTSALIAASGEEPPEVIEPTRGFGIKAIVRPKVIFNVKELGGAKEIRPYWNRYFEGADGFIFVAACDSDSHALIDAAEELKRVAGDSALEDVPALVLLTKSDVEGARGVDEMLQLLFVEEALSGRPFIVRACTATDPPTVIDAFDEYIRLFEDEGDGDGGDSK* # ORIGINAL: g12117.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 76545 79242 . + . ID=g12117;Name=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 76545 79242 . + . ID=g12117.t1;Parent=g12117;Name=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 76545 76622 . + . ID=g12117.t1.exon1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 76545 76622 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 76768 76860 . + . ID=g12117.t1.exon2;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 76768 76860 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 77009 77268 . + . ID=g12117.t1.exon3;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 77009 77268 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 77416 77494 . + . ID=g12117.t1.exon4;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 77416 77494 . + 1 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 77676 77906 . + . ID=g12117.t1.exon5;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 77676 77906 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 78116 78175 . + . ID=g12117.t1.exon6;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 78116 78175 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 78291 78584 . + . ID=g12117.t1.exon7;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 78291 78584 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 78740 78807 . + . ID=g12117.t1.exon8;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 78740 78807 . + 0 ID=cds.g12117.t1;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 78972 79242 . + . ID=g12117.t1.exon9;Parent=g12117.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 78972 79242 . + 1 ID=cds.g12117.t1;Parent=g12117.t1 #PROT g12117.t1 g12117 MQTREVITLQCGHYANHVGTHYWNAQEAMFNWSGGAAGSETSELNHDVLFRYGQTLAGHDTYTPRLILFDLKGASHDPCVLPAACMSLQTAGELIIKLASCTPSITQPLVLSLRHRCSYIAGSLGTLREEGTLYTVATDAGTCWDGGLDEHCAPQLKKNEFLKDLEEEDESFLSTLDVISDKKTAVAAPRIDETKYSLDNDVAVWSDFLRPHLHPRSTHMIREYLHGGDVLPFNAHPLGSSVLANHSVMDAFEDRLHFFVEECDVPQGFQLFCDVHDGFGGLSSSAVSLLADEHKGRGIAAFLTVPPTPADATAKDVDRLLLNTCASLVSILEQATVASVTSVDSTPWNRIRPPPRTFPHLDRLDMGRSYHTSAVLAAAIDTATVSYRLRARESSMSRFSSVLDADLGLRLTALRCAFPLGLSADSTLQERFGASPMWYAHDLAAAPLTPYATTEVISIKLNVASPSACPYFFVYLV* # ORIGINAL: g12116.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 74858 76213 . - . ID=g12116;Name=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 74858 76213 . - . ID=g12116.t1;Parent=g12116;Name=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 76016 76213 . - . ID=g12116.t1.exon1;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 76016 76213 . - 0 ID=cds.g12116.t1;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 75629 75778 . - . ID=g12116.t1.exon2;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 75629 75778 . - 0 ID=cds.g12116.t1;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 75353 75501 . - . ID=g12116.t1.exon3;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 75353 75501 . - 0 ID=cds.g12116.t1;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 74858 75077 . - . ID=g12116.t1.exon4;Parent=g12116.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 74858 75077 . - 1 ID=cds.g12116.t1;Parent=g12116.t1 #PROT g12116.t1 g12116 MDKVNMVVLPGDLVCDTASAGGWGNGGTLRIGAGLRQEQSHIVATKAGVLRFKDPNKLWIENHQRRYVPAKNDLVVGIVSERLGENYRVNLGCHAAAVLPGLAFEGATKKNRPNLTVGAIVYCRLSVANKDMEPEVVCVDGGGRAAGMGELAGGYLVECSISLARRLLATDSRVLQALEANSLRFEIAIGVNGRVWINSPSPQITVLIANAIEASEFMTARQIDVMVKRLVESSGESK* # ORIGINAL: g12097.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 6454 10206 . + . ID=g12097;Name=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 6454 10206 . + . ID=g12097.t1;Parent=g12097;Name=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 6454 6534 . + . ID=g12097.t1.exon1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 6454 6534 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 6675 6775 . + . ID=g12097.t1.exon2;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 6675 6775 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 7151 7242 . + . ID=g12097.t1.exon3;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 7151 7242 . + 1 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 7433 7498 . + . ID=g12097.t1.exon4;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 7433 7498 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 7833 7933 . + . ID=g12097.t1.exon5;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 7833 7933 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 8098 8244 . + . ID=g12097.t1.exon6;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 8098 8244 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 8443 8533 . + . ID=g12097.t1.exon7;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 8443 8533 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 8686 8742 . + . ID=g12097.t1.exon8;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 8686 8742 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 8859 8932 . + . ID=g12097.t1.exon9;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 8859 8932 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 9220 9316 . + . ID=g12097.t1.exon10;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 9220 9316 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 9469 9603 . + . ID=g12097.t1.exon11;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 9469 9603 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 9889 9992 . + . ID=g12097.t1.exon12;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 9889 9992 . + 2 ID=cds.g12097.t1;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 10111 10206 . + . ID=g12097.t1.exon13;Parent=g12097.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 10111 10206 . + 0 ID=cds.g12097.t1;Parent=g12097.t1 #PROT g12097.t1 g12097 MAREHDILVEFLAITGADESIAQSLLEATEWNLEAAVTLYLEDSPAAASFDPASVANQRARPPPADDVRAPIPQTTGVLVDEDGPYSFAPRVNVHQAARSAVFEPLRDFRSEHEAAVRGNAANNERQTLSELFRPPLDLMFNGSLEKALRHSSASNKWLLVNIQKTDVFACQVLNRDLWSDPDMRDFIREHLVFWQVYHDSVEGQEYQHVYPFDGYPHIAILHPVTGERVKYWAEPPESNELLATVVSLLAQYSDNDASDNVAVTPTNRKRRAVDDEEMELRAAIAASLADANSAPSVPPTAVDTPRQPSRPSTASGKGRVVTDVVPVEPPAGAPASDVTRVQFRMPDGKRVVRRFFKNDIVAGLYAFVRSSDAALETTPFEIMVHRDKLGDKKDMTLAAAGIQDALLTVTCT* # PASA_UPDATE: g12101.t1, single gene model update, valid-1, status:[pasa:asmbl_9460,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 19121 20803 . + . ID=g12101;Name=g12101.t1 NODE_7_length_79538_cov_50.0942 . mRNA 19121 20803 . + . ID=g12101.t1;Parent=g12101;Name=g12101.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 19121 19299 . + . ID=g12101.t1.utr5p1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . exon 19121 19416 . + . ID=g12101.t1.exon1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . CDS 19300 19416 . + 0 ID=cds.g12101.t1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . exon 19531 19783 . + . ID=g12101.t1.exon2;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . CDS 19531 19783 . + 0 ID=cds.g12101.t1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . exon 19876 19906 . + . ID=g12101.t1.exon3;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . CDS 19876 19906 . + 2 ID=cds.g12101.t1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . exon 19987 20288 . + . ID=g12101.t1.exon4;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . CDS 19987 20288 . + 1 ID=cds.g12101.t1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . exon 20397 20803 . + . ID=g12101.t1.exon5;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . CDS 20397 20776 . + 2 ID=cds.g12101.t1;Parent=g12101.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 20777 20803 . + . ID=g12101.t1.utr3p1;Parent=g12101.t1 #PROT g12101.t1 g12101 MALVNVDSEFIGKYKVRSVLGTGNTGEVKLGVHSETGEKVAIKIIPKSPATSKQAINLRREICYLKLIDHPNIVRLVDVAEGSNCTLIVMEYISGTELFYRIKEKIFKEKEMRHVFRQIVDALDYCHRHNILHRDLKPENVLIDKKDNIKIIDFGFSNMLGEDGYLETRCGSPHYLAPEIILGGKYGASIDVWSLGVILYVAVTGSFPFDGRNLQGVYESILKDRIEFPRALSPECGDLIARMLNRDAAHRATLDEVRMHPWTNKGYDAPPTMHRRLSMHPFPSEALDESVLSELAAMGFARDEVVTALQSGSQNLYATAYVLLSEKRALQAAVGGGGPSATPPREKKGIFSRILHSVHK* # PASA_UPDATE: g12107.t1, single gene model update, valid-1, status:[pasa:asmbl_9456,status:12],[pasa:asmbl_9463,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 43476 46304 . + . ID=g12107;Name=g12107.t1 NODE_7_length_79538_cov_50.0942 . mRNA 43476 46304 . + . ID=g12107.t1;Parent=g12107;Name=g12107.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 43476 43538 . + . ID=g12107.t1.utr5p1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . exon 43476 43676 . + . ID=g12107.t1.exon1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . CDS 43539 43676 . + 0 ID=cds.g12107.t1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . exon 43788 43845 . + . ID=g12107.t1.exon2;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . CDS 43788 43845 . + 0 ID=cds.g12107.t1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . exon 43939 44456 . + . ID=g12107.t1.exon3;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . CDS 43939 44456 . + 2 ID=cds.g12107.t1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . exon 44545 44853 . + . ID=g12107.t1.exon4;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . CDS 44545 44853 . + 0 ID=cds.g12107.t1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . exon 44974 46304 . + . ID=g12107.t1.exon5;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . CDS 44974 46185 . + 0 ID=cds.g12107.t1;Parent=g12107.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 46186 46304 . + . ID=g12107.t1.utr3p1;Parent=g12107.t1 #PROT g12107.t1 g12107 MQNQGHPASVYYENGNGKNSVGGNAYNQSAIMRDGDHENGLNLDRQLADLDLNRNGPSYGGGRGEGGRYVPPHLRNRAAGPPSDGNYAQSHPQERRAPREEYPPLEAQAPPAVLPTQGHGAYAEDDGRDVRDVPPQRSFADYRESHRDHRDPREYSGSGGGRNYGGQGGRSYGGPQQRWNDRGGREGGAPAPGATKLPRDERVEKELFAGNATGINFDKYEDIPVEATGRDCPKNIETFDDCDLGELVAENIKLANYTTPTPVQKYSIPIVGGGRDLMACAQTGSGKTAAFLVPILSQLFKEGPPPPQPRGYGRRAKQFPDALVLAPTRELASQIYDEARKFAYRSYARPCVVYGGADIGQQLRELERGCHLLVATPGRMIDMIERGRVSLERCRYLVLDEADRMLDMGFEPQIRQIVEREGMPPVGQRQTLMFSATFPKEIQMLARDFLDDYIFLAVGRVGSTSENITQKIIWVEEHDKRSALLDLIAAADAKCLTLIFVETKRGADALEDYLCREGFPATSIHGDRSQREREDALRTFRSGETPVLVATAVAARGLDIPNVRHVINYDLPSDIEEYVHRIGRTGRVGNLGLATSLFNDKNKNIVRDLVDLLTEAKQECPRWLEGLGYEGGRGRGAPTGGFRRGGGGGGGGSRFQSRDYRQQQPQGSHGGGYGGHGAGGAGGYGGGYGGGGGGGGGGGGGAPPHRGGKDSHGGHGGGAPMPPYGSYGGNYGGSYGGGSSAWDS* # ORIGINAL: g12103.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 27237 31672 . + . ID=g12103;Name=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 27237 31672 . + . ID=g12103.t1;Parent=g12103;Name=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 27237 27278 . + . ID=g12103.t1.exon1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 27237 27278 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 27399 27579 . + . ID=g12103.t1.exon2;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 27399 27579 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 27710 27863 . + . ID=g12103.t1.exon3;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 27710 27863 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 28406 28545 . + . ID=g12103.t1.exon4;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 28406 28545 . + 1 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 28633 28801 . + . ID=g12103.t1.exon5;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 28633 28801 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 29052 29113 . + . ID=g12103.t1.exon6;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 29052 29113 . + 1 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 29288 29346 . + . ID=g12103.t1.exon7;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 29288 29346 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 29455 29611 . + . ID=g12103.t1.exon8;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 29455 29611 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 29718 29876 . + . ID=g12103.t1.exon9;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 29718 29876 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 30115 30218 . + . ID=g12103.t1.exon10;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 30115 30218 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 30317 30461 . + . ID=g12103.t1.exon11;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 30317 30461 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 30608 30813 . + . ID=g12103.t1.exon12;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 30608 30813 . + 2 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 30925 31001 . + . ID=g12103.t1.exon13;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 30925 31001 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 31098 31164 . + . ID=g12103.t1.exon14;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 31098 31164 . + 1 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 31244 31345 . + . ID=g12103.t1.exon15;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 31244 31345 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 31523 31672 . + . ID=g12103.t1.exon16;Parent=g12103.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 31523 31672 . + 0 ID=cds.g12103.t1;Parent=g12103.t1 #PROT g12103.t1 g12103 MFKLSATLAGHSQDVRAVCTTPWGHILTGSRDTTARLWAANEAAGAYECIAVLTGHTHFVGAACHVPAHGPFEHGLLATGGHDKLVMTYNLDDPTVVVHTLVGHTEPVCALAAADNGVLISGSWDRSVKLWSATGDMLVEFNGHSSFVYACAAISSTTFLSSGEDRTVRIWTADGQCRQAIHHPATSVWAVAALPNGDFVSGTSDGMARVFSATQDRQADADSLQASCCESVGSINKKDLPGVEALQSPGTRDQQVRMIRQGRLVEAYQWSASEGRWVKVGEVVDAVGSGRQVLEGKEYDHVFDVDLGDGLPTRKLGYNNTENPWVVAQDFIHREELPQHFLDQVANFIVTNAKPVMLEAVDDTTQSQFADPFTDSPNALSCFIFDTASAALLGKKVAQFSDSLRGDQQLSAEEMRALETASPHIETGDKARRFNFTAQHIALADKMLGWPADMVFPGIDILRMIVLNPRQASLVATPARTREVLTVSRLGMEGSHDAACMLALRFFANALSVEASAPVVLAVAGEVISRLHKSGNVATKNTRVATASFLANLFIRGGTSAGAWQQGALALLLQAVNAVLIPARSEQGFATETEPDVLLRTLCGLTALVSKQRSRASDIAASGALPHIQRLLDSPSDPVRKMAAQLGELLLAAGKHA* # PASA_UPDATE: g12100.t1, single gene model update, valid-1, status:[pasa:asmbl_9443,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 17370 18825 . - . ID=g12100;Name=g12100.t1 NODE_7_length_79538_cov_50.0942 . mRNA 17370 18825 . - . ID=g12100.t1;Parent=g12100;Name=g12100.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 18760 18825 . - . ID=g12100.t1.utr5p1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . exon 18542 18825 . - . ID=g12100.t1.exon1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . CDS 18542 18759 . - 0 ID=cds.g12100.t1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . exon 18274 18417 . - . ID=g12100.t1.exon2;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . CDS 18274 18417 . - 1 ID=cds.g12100.t1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . exon 17954 18162 . - . ID=g12100.t1.exon3;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . CDS 17954 18162 . - 1 ID=cds.g12100.t1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . exon 17665 17807 . - . ID=g12100.t1.exon4;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . CDS 17677 17807 . - 2 ID=cds.g12100.t1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . exon 17370 17506 . - . ID=g12100.t1.exon5;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 17665 17676 . - . ID=g12100.t1.utr3p1;Parent=g12100.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 17370 17506 . - . ID=g12100.t1.utr3p2;Parent=g12100.t1 #PROT g12100.t1 g12100 MQDPNADTEWNDALRRHGIIPQKEKEMTEADLVDMIEQTIAEKQQGKSLEDMDLDELDELEDEEDERVLAQYRAKRLQEMKAFQHRARFGDLVQISAHEFVAEVNKAGEGVWVVLHLYKDGVPLSTLLNQHLLRLAKKFPATKFLKIYSTDCIPNYPDANLPTMLIYHNDKIVRQIVGLSTMGGSSTKMEDVEWALAQLGAVETEMEANPRENRRAGDVLTRSIHRKDNEEDE* # ORIGINAL: g12099.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 16130 17581 . + . ID=g12099;Name=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 16130 17581 . + . ID=g12099.t1;Parent=g12099;Name=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 16130 16284 . + . ID=g12099.t1.exon1;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 16130 16284 . + 0 ID=cds.g12099.t1;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 16483 16573 . + . ID=g12099.t1.exon2;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 16483 16573 . + 1 ID=cds.g12099.t1;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 16688 16903 . + . ID=g12099.t1.exon3;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 16688 16903 . + 0 ID=cds.g12099.t1;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 17049 17231 . + . ID=g12099.t1.exon4;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 17049 17231 . + 0 ID=cds.g12099.t1;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 17393 17581 . + . ID=g12099.t1.exon5;Parent=g12099.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 17393 17581 . + 0 ID=cds.g12099.t1;Parent=g12099.t1 #PROT g12099.t1 g12099 MAENALDAEYPGRANRPGDTDITFDLLPGWCASDGEGESGASRRRPMCLRCCRPVSACLCAHLPPSPILVATQVHILQHPNEASRPMRTSPLIEACLGEKCTVTRGRRFPPPVRATMPDSGTFLLFPGEGAREVQSVRPGDVACLIVLDGTWQQADKMLHRDRFLKGLPRLCLPSDVHRTSEYAIRTQPTADSVSTLEAIAFALQSIERSQAVQEVLMKPLRALVALQLERGQVVHHAKSQRGLRTTRTPGQYLRRQHHSGDMVNEAIQRHDSHAST* # PASA_UPDATE: g12095.t1, single gene model update, valid-1, status:[pasa:asmbl_9440,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 292 1698 . - . ID=g12095;Name=g12095.t1 NODE_7_length_79538_cov_50.0942 . mRNA 292 1698 . - . ID=g12095.t1;Parent=g12095;Name=g12095.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 1567 1698 . - . ID=g12095.t1.utr5p1;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . exon 1444 1698 . - . ID=g12095.t1.exon1;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . CDS 1444 1566 . - 0 ID=cds.g12095.t1;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . exon 678 902 . - . ID=g12095.t1.exon2;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . CDS 678 902 . - 0 ID=cds.g12095.t1;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . exon 292 480 . - . ID=g12095.t1.exon3;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . CDS 448 480 . - 0 ID=cds.g12095.t1;Parent=g12095.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 292 447 . - . ID=g12095.t1.utr3p1;Parent=g12095.t1 #PROT g12095.t1 g12095 MASLFERWFVVRAEEEQEAEAPAEEPVLAAEEEEKAVVPVEAEDEPAAVEPAAPEEEEEEPVDPRVALEEKCGASHHCAPLAREFEKCNARVASRPGTAETCSQELFDFVHCLDHCVSQKLFSKLK* # PASA_UPDATE: g12108.t1, single gene model update, valid-1, status:[pasa:asmbl_9448,status:12],[pasa:asmbl_9449,status:12],[pasa:asmbl_9457,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 46324 54968 . - . ID=g12108;Name=g12108.t1 NODE_7_length_79538_cov_50.0942 . mRNA 46324 54968 . - . ID=g12108.t1;Parent=g12108;Name=g12108.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 54833 54968 . - . ID=g12108.t1.utr5p1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 54787 54968 . - . ID=g12108.t1.exon1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 54787 54832 . - 0 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 54572 54678 . - . ID=g12108.t1.exon2;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 54572 54678 . - 2 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 54400 54450 . - . ID=g12108.t1.exon3;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 54400 54450 . - 0 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 54117 54282 . - . ID=g12108.t1.exon4;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 54117 54282 . - 0 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 47372 54020 . - . ID=g12108.t1.exon5;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 47372 54020 . - 2 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 47142 47263 . - . ID=g12108.t1.exon6;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 47142 47263 . - 1 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . exon 46324 47015 . - . ID=g12108.t1.exon7;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . CDS 46375 47015 . - 2 ID=cds.g12108.t1;Parent=g12108.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 46324 46374 . - . ID=g12108.t1.utr3p1;Parent=g12108.t1 #PROT g12108.t1 g12108 MAPLRVTVALVVAATALLLCNPSLGAVVVGGQDCSNGGQNCTSTIQCDSPLVYCLETRSCVNPNPCGNPANATCPEGQKFCSTLAKCINSNDTCDSVSCPSGTVWCVASSKCVNVTCANPPPSASTSQAPPSASPPPAASSPPPQAGNSSPPPSESSPPPPAGSSPPPQAGNSSPPPAGSSPPPPAGSSPPPQAGNSSPPPAGSSAPPAGSSPPPQAGNSSPPPAGSSPPPAGSSPPPQAGNSSPPPQASPSPSGGEVTCEAGKIFCMQQNGCVPRDSGACASPTPSPSAAVSSCQANEVFCLALGRCSVSCSTPCSIDEYSCSGTCINKTRQCGQECAPSYSFCASKGQCIPATANCPVVCADTSTYLCNTTNTCVKRTERCGGVCLADRIYCVTSSACLLKDGTCKDPICKDGETLCADATCSVACGVNTTCAAGSWFCKATTGCITNAQPCNKVCNVGFSACATTANPCIVVGTFCPPTCTAGSSYCDILQACISSSLPCVAPCAEGTVRCDIKNACIPANTPCTAHVDVFSRDTSFTLPAFDEDTTSLPVSLDGLLKVALAQRNASNGGIAIAFSQFKMMVMDSKKSVFQYSVNNGSTWAALGEVDISKAVVLRARPETLLRVVPEANFFGTGTLRAYGWDGGVYNQSQSVAIGGAFDHIDQFSIAITVKVNNVADTPSMDPTTITLPAMAEDLLDAQNPGVRLSTLGLGMEDADSALDSATFLPLLELVLTKLNLDLSAPDGNTRLKNIPADVFATILKGFDPTIKLETASDNQNALDVFVYSANEFPALAVVNTNGNGVWEVLKNGTWRTLNATNGQTPVVPVWSYVRFRPAANFVGKSSLTYRAIQRDATAVTDSNASSQMGTLNVDVTAVNDRPTLKANAGSFALTSLAYNVTATPPTGDTVPSIADAIGDDVDGDALGIAIVDFSPRVANDGSSAGLWQVKVFSTANWINFPSDITQRNVYLLNRNARIRYFPSEKSFANATVTVLPWDGANRGIRGNILRTLGTADFDASSELGAQSITITVKRMFCDNSTSSNKFFDACGVCDGDGKSCAGCDGVAGSNKKVDVCNVCGGDGKSCLGCDGVPNSGAKVDDCGDCKGFNASKDCAGVCRGKATRDDCGECTGGSTQKTPNYLKDCAGVCNGNSKFDQCGDCATPDNFNKKLDCAGECSGTAIRDSCGFCYKNGTARWWVDCKGVCSGKAKVDSCGVCDGKDASLDACGVCSGNNSTCADCAGVPRGSAKRDSCNVCNGDDSSCVKITTLSPAAAIAGLVSKLRINGPTGNATSQSQIFCTYVTSGTPTTVTATFVRKGAIDCPIPETLTTGKYDVTVTVSGSATNSVTFAILGNVAVSGIAPTEGTLPGPFVVRLSGSGFVDNGANTKCVFINVDTDARFATPVTFSNSSSLSCSIDYSFSARLSVYVIFDGDASAVVYKNSAPVFTVYAAAPTPSVAQFSTSGGSFAVSFNRDMTQRTGTSCDGYFNDAAVAKFGKNAQCFWSTQSLLTVSLRSGATIAPLDTISVGGSRLSPNGERFFRSATTTLSVSPPTELAPVKIIVDVPEEVGSCTSDVVIRYSVVDGSGGRDVTWSWTVVADPVEDTSAIVSDLNAGGNTERAVIRNLAAGSSYRIVVKAKNFLGVWSDALSAVLRKSAQALPSVSISGGRATTIPFRSSATTLYGIAVPPCNTTASLKYAWTFDNPSVVLKASALTQLNLVIPKYTLSSGKTYVATLTVTQGSVSASASQILTVGSVDLVARISGGAEQTFAADRDFVLQGECVDDDASDDEAAQNPCSFSWRCADAGGSVCGNIEVGTSLFSTNASARAADPAVAKVRVPKTYLAPGKYTFRMTVFKGSRNSFVETTVTVVAGNPPSIVFDEVGDNGKVLSNKRVRITANVITGSSDVSAKLVWSNVAANGFATVDLSNSTNVCTAGGSVTLQSLCIESDTLVAGSKYRFRLQATAAGAKGTSDIDVLVNGGPTLIDLSADKYTGEAGDSFEFTAKFVDDDTPLTYSWGYVLSNERPVSLVEPKPNNVATLRFPTGSSSANYNLTVYCTAYDKFSASTRATIQVTVKPPAAVTNHDVSAQIALARAKITESTEFNNGDYPSYLTTLVLALDLVNRAIGTDCPQTALDALEFVLTEFDKLYPKMELNDANIKRLTTFLNQMTLSGTCVPATVRSKVTDYLGKVVDAALKSQFSGSGGGAVDKDLCGFALDALSGSNGTSSSNSTVTDMVSNLGGALISDAAPGEAPQTVTSGDNSITVSAQVQQYSASDNSSASFGTGCTGSNCGGATVSSDAMGDIVNTTACDQATGVGCTVNVGGVYAAYKSDPYGSGTTVDSTIVDFSLTDSKTNKEFDVDGLSSGIDIVIQIDPSETGPLECKYYNATTKKWQTDGVRLVNRTSTTITCRTTHLTTFGGVQSQGSNVPVNRIFASLRGNGVNAATLNAANSTLMAQLKSGIASAIGSSGVTSSSVVVTSVVDQPDGSVVVGFYIAGANAAESASLTSAAESRLYAVRPTFASFTYFGLTWVSSSGVNVVAIAVPVAVGGAILIAIVVAVIINNNKKKQKVAPTESDDAKHTAEAPAPSQAF* # ORIGINAL: g12111.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 61784 63271 . - . ID=g12111;Name=g12111.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 61784 63271 . - . ID=g12111.t1;Parent=g12111;Name=g12111.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 62472 63271 . - . ID=g12111.t1.exon1;Parent=g12111.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 62472 63271 . - 0 ID=cds.g12111.t1;Parent=g12111.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 61784 62330 . - . ID=g12111.t1.exon2;Parent=g12111.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 61784 62330 . - 1 ID=cds.g12111.t1;Parent=g12111.t1 #PROT g12111.t1 g12111 MTNVHGIMRDERQPLPQKDVGGGHGLGVGPNGGENEAAEDAEHGQGDVAEPAAGDAAGVRPVRVVHDIPTGPQDRPALREGEFAGLIGERVAVEGALVPAVASSRIAFRRLPCEGGPLQSAGAVVDVVAVCTGVTASRMAVTMIKSVLYRRTVPLRFHIVTDDEFASSLVALLREWELPEVEVVIYDAAECFRRVEWVPNVHYSGRNGLLKLALHEVLPPSVTRAVVLDTDVLILVDIRMLIETLAAPGDGGGSAPCIAMAENLSDWYLGRLPVVRFPWPAVGRGLNTGVSAVDLACLRHIGWTEMWEDEADRQIASRRRKWPDEPRLYAAQLADQDIVNSMLASDVRGGAGGSTRLRDVVRQLPCEWNLQIGDNADPWRCIKRGTNETVADALRRAHVVHWNSRKKMRAEGDVVAQMRARYSFYANLTPDVLGERSDRFVCGRTEAV* # PASA_UPDATE: g12106.t1, single gene model update, valid-1, status:[pasa:asmbl_9462,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 40978 42901 . + . ID=g12106;Name=g12106.t1 NODE_7_length_79538_cov_50.0942 . mRNA 40978 42901 . + . ID=g12106.t1;Parent=g12106;Name=g12106.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 40978 41131 . + . ID=g12106.t1.utr5p1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 40978 41233 . + . ID=g12106.t1.exon1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 41132 41233 . + 0 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 41325 41374 . + . ID=g12106.t1.exon2;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 41325 41374 . + 0 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 41481 41551 . + . ID=g12106.t1.exon3;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 41481 41551 . + 1 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 41644 41751 . + . ID=g12106.t1.exon4;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 41644 41751 . + 2 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 41855 42057 . + . ID=g12106.t1.exon5;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 41855 42057 . + 2 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 42171 42302 . + . ID=g12106.t1.exon6;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 42171 42302 . + 0 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 42415 42608 . + . ID=g12106.t1.exon7;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 42415 42608 . + 0 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . exon 42705 42901 . + . ID=g12106.t1.exon8;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . CDS 42705 42786 . + 1 ID=cds.g12106.t1;Parent=g12106.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 42787 42901 . + . ID=g12106.t1.utr3p1;Parent=g12106.t1 #PROT g12106.t1 g12106 MQFVQSKLLGIGEFLTPVLKASKFQETGVLTPEEFVAAGDFLVFKCSTWAWESGEDSKRRSYLPPDKQYLVTRNVPCFKRAKNMEYVDEERTIEDEDDEGGWIETHTAAGASDGAHGDELVEITAALGKAAVSSGPTTAAPPPKKNASTPATTDCDSSDDDVPDMDDYEEENLEEEDAGALPAKTEASEGVDNILKSRTYDLHITYDKYYQTPRLWLSGYDEQRKPLSVEATYEDLSQDHAKKTVTIESHPHLSLSLPSIHPCRHSNVMKKIIQNVGLSGGELGVHMYLLIFLKFVQSVIPTIEYDYTREIRF* # PASA_UPDATE: g12096.t1, single gene model update, valid-1, status:[pasa:asmbl_9458,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 1981 6254 . + . ID=g12096;Name=g12096.t1 NODE_7_length_79538_cov_50.0942 . mRNA 1981 6254 . + . ID=g12096.t1;Parent=g12096;Name=g12096.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 1981 2258 . + . ID=g12096.t1.utr5p1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 1981 3734 . + . ID=g12096.t1.exon1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 2259 3734 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 3874 4050 . + . ID=g12096.t1.exon2;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 3874 4050 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 4324 4428 . + . ID=g12096.t1.exon3;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 4324 4428 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 4625 4717 . + . ID=g12096.t1.exon4;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 4625 4717 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 4828 4989 . + . ID=g12096.t1.exon5;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 4828 4989 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 5160 5370 . + . ID=g12096.t1.exon6;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 5160 5370 . + 0 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 5547 5708 . + . ID=g12096.t1.exon7;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 5547 5708 . + 2 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 5824 5856 . + . ID=g12096.t1.exon8;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 5824 5856 . + 2 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . exon 5966 6254 . + . ID=g12096.t1.exon9;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . CDS 5966 6207 . + 2 ID=cds.g12096.t1;Parent=g12096.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 6208 6254 . + . ID=g12096.t1.utr3p1;Parent=g12096.t1 #PROT g12096.t1 g12096 MEGEEDSNRARGPAPSRPLPAPKPAQPSKPLPKPPGPTTASPTPSPTAGAPASSQSPVSSPKPALRPKPNLAALPAKGAGGGGASPLASPAPSSGTQHVVPFGKPAEEEIHGDAEAVEPSIDASVCRPTAPLPRPPNSRAAPSTVIAQADEAVPLQESVAPAPTVLTNPTPGNNATASLAKGPPVSVVPGKGLPPAPRRAPPPPPPGATPVASSPRPSPSSSVRNSVDSERAVDSAALAAAVTASVEQSPPARRPPSFKAAVPPASAGDEPVRKKSAALVPPTFSQSLSVDATSTEPVRKKSFAPSSPLPVLPVQEAASAASTAPVALPMRKQSIAPSAPLPELPRQTEEVVSAVEGPIAAAAEVVVEDDDGRRLVVAMWSNDAQEDDEISFKEGDVFEVTNTENSEWWVGVANGKTGVFPSVYVKLIDKPGREKSNSMTHDSDDGTDVESAAPPKETPPRKLTPEEMRVRVMMEIFTTEKDYVDDLKLVIEGYEKKMIERKNVPEDVLEVLFGNIDEIYDFQQKFLVTMQHCMQPEAKYETQLGKSFLVHKDGFKIYSDYCNNHPRACEEMVRLLQEESLKAFFLGCRLLVDADISLEGFLLTPIQRICKYPLLLKELLKYTPEGHPDHANVNAALDGMKEVAMLINETKRRMENLEKISEWQHTIDGYQGPDITSTSTELILEGSLVKISSGRAQERYFFLFDNVLIYTRKDFLKTSVYIFKGRIPTDGFEVVDINDGEVTLNGSKVSNCWKVIRRASKNKSYVLIAKTPEEKKKWLDAFALEREKAAKADQNGTQPQRRMQVEKPGQKELKSSPSLRRKDSAKEKKAAPQPLAKTVVKKGLFAGADKSDKSDKKDASASPSSSPLIPAFGNVMKELQQTRGQS* # PASA_UPDATE: g12110.t1, single gene model update, valid-1, status:[pasa:asmbl_9464,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 59849 61754 . + . ID=g12110;Name=g12110.t1 NODE_7_length_79538_cov_50.0942 . mRNA 59849 61754 . + . ID=g12110.t1;Parent=g12110;Name=g12110.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 59849 59936 . + . ID=g12110.t1.utr5p1;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . exon 59849 60095 . + . ID=g12110.t1.exon1;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . CDS 59937 60095 . + 0 ID=cds.g12110.t1;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . exon 60197 60353 . + . ID=g12110.t1.exon2;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . CDS 60197 60353 . + 0 ID=cds.g12110.t1;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . exon 60556 61754 . + . ID=g12110.t1.exon3;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . CDS 60556 61613 . + 2 ID=cds.g12110.t1;Parent=g12110.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 61614 61754 . + . ID=g12110.t1.utr3p1;Parent=g12110.t1 #PROT g12110.t1 g12110 MEAKGMRKQDSAASRHPPVRSSAIALRRVSVQPTYYKRDLPYPAIEFSSPKGKSLFREALEGGTMEGFFRLMEQFQTQCETAFCGLATLSIILNALAIDPGRLWKGPWRWFDESLLDCCEPLETVKVKGITLPKLACLARCNGATAKLVYASTVTIDEFRAEVARCARGDGVHMAAAYARPALGQTGTGHFSPIGGYHAASDRVLILDVARFKYPPHWVPLKTMYAAIVEPDPETQKSRGYILLSARESRPGCLFTVTCQAPTWYSVARYVAQKFGTPQWAEGALVASRAPCAASTVVGEFLRGLPRDAQQFLSARQMVDGVEDIAGQLIEDVREAAMYDFVLETAGGAGASASAESSASSSDAAQDVSDAAVGQAVVNTLLCLLCPPALWVSAARLLFAGAPEAEVDAVVQALSQAADPAHLVRFAADEVRHLRSQVAELVCTNERCAPGHTCMTN* # PASA_UPDATE: g12102.t1, single gene model update, valid-1, status:[pasa:asmbl_9444,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 20873 26482 . - . ID=g12102;Name=g12102.t1 NODE_7_length_79538_cov_50.0942 . mRNA 20873 26482 . - . ID=g12102.t1;Parent=g12102;Name=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 26411 26482 . - . ID=g12102.t1.exon1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 26411 26482 . - 0 ID=cds.g12102.t1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 25198 26282 . - . ID=g12102.t1.exon2;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 25198 26282 . - 0 ID=cds.g12102.t1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 24835 25095 . - . ID=g12102.t1.exon3;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 24835 25095 . - 1 ID=cds.g12102.t1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 24048 24717 . - . ID=g12102.t1.exon4;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 24048 24717 . - 1 ID=cds.g12102.t1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 23688 23906 . - . ID=g12102.t1.exon5;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 23688 23906 . - 0 ID=cds.g12102.t1;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . exon 20873 23587 . - . ID=g12102.t1.exon6;Parent=g12102.t1 NODE_7_length_79538_cov_50.0942 . CDS 20873 23587 . - 0 ID=cds.g12102.t1;Parent=g12102.t1 #PROT g12102.t1 g12102 MAHSAAPLRNIHHIQFGIFSPEEVKQMSVCKIEYREAFENGHPKSGGVCDPRMGTIDKGFKCQSCTGTSGECPGHFAHIELVRPVYAIGFLTTIIKTLRCVCFHCGKLLVDQRDPKFREYLKIKRASLRFTKMVELCRTKTVCEATPTDVDGVSMANGDALHGVGHGGCGRKQPVIRRDGLALTVEWKDVDPESHDRKRPLKPEEVLNRLKSISDQDCIALGLDPLYSRPDWMVVTVLPVPPMAVRPAVMMDSSSAAQDDLTHKLSDIIVANNSLRLQQQNGAPDHILEEFHKLLQYHVATYVNNEIPGQPPATQKSGRPLKSISQRMKGKEGRIRGNLMGKRVDFSARTVITADPNLSLDELGVPRSIALNMTFPEIVTPYNIERMQELVRRGPLEHPGALAIIRDDGLRLNLQYSRKPGSDIHLQYGYKVERHIIDGDYVIFNRQPSLHKMSMMGHRIRILPWSTFRLNLSVTSPYNADFDGDEMNMHVPQSLETRAEISEIMAVPRQILTPQANRPVMGIVQDTLTGVRKFTKRSTFVDLDVVMNLLMWLPEWDGRIPQAAILKPKPQWTGKQLISLIIPDKVNIVRFHSTHDEAEDKSPLRHLTAGDTRVLIERGKLISGIMCKKTLGASDGGLIHVIFKECGHEICRNFFGSIQRLVNNWLMAEGHSIGIRDTIADVETSKTISALITKAKEDVKQVILNAIHGKLEPTPGNTLRQTFENEVNRILNEARDDAGKRAQNSLDESNSMRLMVIAGSKGSFINISQVIACVGQQNVEGKRIPFGFRFRSLPHFIKDDYGPESRGFVENSYLSGLTPSEFFFHAMGGREGLIDTAVKTSETGYLQRRLVKAMEDVMVKYDGTVRNSLGYVIQFLYGEDGFDGAHLEFEKLPTLMIDNATFDRQYRFDIDRRDLVSKLQPQAADNLLENPNSAAILEREFHQLQEDRRTVREIFPTGEGLFKWTMPFDMSRLVWNAQKMFRLSKRDATDLSPVDVVGQVGLLLDRLTVVGGTDAISSEAQENATRLVKIFLRANLASRFVVAEHRLNSAAFKWLLGEIENRFAMAMVHPTEMVGALAAQSLGEPATQMTLNTFHFAGVSAKNVTLGVPRLKELINVSKQPRTPSLLVHLLEDVAQNKERAKDVACALEYTVLRKLTTRTEIHYEPKVSETLVEEDIEFVRDYYEVEDPLGEKLNKLSPWVLRIELDRKAMTDKRMTNERVASEIIKVFEGDLDCIFNDDNSEKLVLRIRITNNGNKGDGGLVDADSEDDLVLRKLESNLLNNLPLAGVEDITRVYIAEKKARRFLPDGGTEMKKEFVLETDGSNLLHAMSQDKVDARRTTSNDVVEILQTLGVEAVRVALLKEMHAVYNTYGIYINYRHLALLCDVMTFRGSLMPITRHGINRMDTGPLMRCSFEETVDVLLEAATFAETDWLKGVTENIMLGQLAHLGTGDFELHIDEEMLEHAIDNPLANAVAPMDAMLYAESPKGDMSPAKTPFSGQTPMHSSWSPAQTPGQMAAFSPMSDGSSPFNSWSPASPSPYAANSPGAARSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNDKTQ* # PASA_UPDATE: g12115.t1, single gene model update, valid-1, status:[pasa:asmbl_9466,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 72962 75139 . + . ID=g12115;Name=g12115.t1 NODE_7_length_79538_cov_50.0942 . mRNA 72962 75139 . + . ID=g12115.t1;Parent=g12115;Name=g12115.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 72962 73024 . + . ID=g12115.t1.utr5p1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . exon 72962 73429 . + . ID=g12115.t1.exon1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . CDS 73025 73429 . + 0 ID=cds.g12115.t1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . exon 73517 73646 . + . ID=g12115.t1.exon2;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . CDS 73517 73646 . + 0 ID=cds.g12115.t1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . exon 73766 73875 . + . ID=g12115.t1.exon3;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . CDS 73766 73875 . + 2 ID=cds.g12115.t1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . exon 74022 74140 . + . ID=g12115.t1.exon4;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . CDS 74022 74140 . + 0 ID=cds.g12115.t1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . exon 74265 75139 . + . ID=g12115.t1.exon5;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . CDS 74265 74442 . + 1 ID=cds.g12115.t1;Parent=g12115.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 74443 75139 . + . ID=g12115.t1.utr3p1;Parent=g12115.t1 #PROT g12115.t1 g12115 MYTHMRPLSSFRLVMRLRAVLAPRRHAITASSGTFSVPSPPASQPITPAPSSSSVDGSEISKFVDVSAHWWNPCGPFAPLHALNAPRVRFLRDTAVAHFGGSALEHHRFSRSSPSAPLASLSILDVGCGGGILSESLAQLGGNVLGIDAAAASIAVAQRHAARDPSLRIRLSYEATTAEDLVAVGRQFDIVVASEVVEHVTNPPEFIRNCARLVAPQGMLVVSTINRTPAALALAVVFAEQIARIVPRGTHDHSRFVKPEELTHAIQAESALRVVASRGISYSPIGNTWALSSNLSVNYILAATHAMDAPVSA* # PASA_UPDATE: g12098.t1, single gene model update, valid-1, status:[pasa:asmbl_9441,status:12],[pasa:asmbl_9442,status:12],[pasa:asmbl_9453,status:12],[pasa:asmbl_9454,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 10379 15682 . - . ID=g12098;Name=g12098.t1 NODE_7_length_79538_cov_50.0942 . mRNA 10379 15682 . - . ID=g12098.t1;Parent=g12098;Name=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 14687 15682 . - . ID=g12098.t1.exon1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 14687 15682 . - 0 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 13869 14561 . - . ID=g12098.t1.exon2;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 13869 14561 . - 0 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 12910 13613 . - . ID=g12098.t1.exon3;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 12910 13613 . - 0 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 12582 12803 . - . ID=g12098.t1.exon4;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 12582 12803 . - 1 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 10809 12492 . - . ID=g12098.t1.exon5;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 10809 12492 . - 1 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . exon 10379 10695 . - . ID=g12098.t1.exon6;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . CDS 10381 10695 . - 0 ID=cds.g12098.t1;Parent=g12098.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 10379 10380 . - . ID=g12098.t1.utr3p1;Parent=g12098.t1 #PROT g12098.t1 g12098 MSGLLSVRGGAPPSSALSPQPSSGPRRALAAAIKHDADQRVPAADDASPPPVVLKAGDQAWIPCDRECYRRVTVRSVDIKAAVAAVYDAEFKVATVALKDALSANDVASDGVEDSTALTHLNEAALLQNLRSRYLDGDRIYTYTASILVAVNPYKEISGYGSDQMRRYCGVSLGRLPPHVYAIGDSAYRRMCAQKEDQSVLCTGESGAGKTETCKHLLRYLAFAAESTQRQSPAQPQPSQQPLSAGASLEARLLAANPVLEAFGNAKTLRNNNSSRFGKYSEVHFDRTGAIAGASLETYLLEKCRVTMAADGERTFHIFYQLIAGAAASEKEEYALGSPDEFKYLSRSQCTGVAGVNDAMEYASVCASLDAVGVPKEIQSHVFRVVAAILHLGNVSFVNRRGKTVEGAVIDESDALCTAAVSHAARLLGMAESALRSSLVSRTLVAGGGGGGAVERYEIPLSVAQAVAARDSFARHMYGLCFEWLVGRIRDSLRGETRVSGRIGILDISGFEVFETNRFEQFCINSANERIQQHFNAEILRQEQLIYELEGLRWKKIPYDDNSSIIDLLENKRTGIMAIIDEECLVPKATDRTVALKIHTMHGANQHLSKPKPVSRRARTTSVSLVDSEAFVVRHFAGEVTYSTDGFLERNNDALQEDLLALLDGSTDTFVSRLASIGRAGNSVASLASATSASGYGATLSVGGDADTRRRLSSGAGQPRVRTVVGVFQRQLQDLMDRLTQTHSHFVRCIKPNQAQQPDAFEGLEVMAQLRYAGMCTALLLMQKGYPTRCSFDELHARYSSLMPASIAHLRKATFCEALLVALDLHGGRDFQMGLSKVFFRAGRLAFLEELLSGSREQMESVVGRVRVWLARKRFRAAFFALRAARRFVPLLLKVRRIRRFRRAVCVYVRVLHVFRASVERARGRLVTDTATRERRAVEAMSRANAEALERHLREEAERIRIEQKAERRRQKLDAQHRLEARCAAAEAERAVLLTKLSDLEAQCAAAHQESHEQRQATLEAQAAAEQLRGEAATLGRRLDAAEASRDAAQAEAAAADTVRAGAQAAADEAVRMARAEAAAKDASERALAAELAARRALEATVGDLRQTVEAEAVDKESTWAQLASASSRLSAAEVALQSRDAALESLRASLESAQAALAETTARASAAEDASRTIRKSLDAALEEARRTVAAEVSAKELTVASLENCRLRLQESEGHSARQQDAANARIAELEQRIRALEAELRQRERANALLAEGSVQTASALAAEKTATAEARERLRAEYAARTSDAEGFRAQLDEIRKHHAAAVWSRDAAAEKTRRELRALQAETAALRQTFAATEANLADALDTIEHSEAHVMRLSEALREAEDAAGDASSRIRELEKDHASLVPIAVKCYEAQLRLKNIYSKYPKAADLAKVVFGDLGYNNVSRNATKVGVLLKLGGLNLDKFQERHIVLNDSFVFYYGAAGAWWPKGLWRVDQGRAEVLDAPFLGQPHAFRITVSDADGNTREYILAASNDMERDDWVEAIHDTGSALQLL* # PASA_UPDATE: g12105.t1, single gene model update, valid-1, status:[pasa:asmbl_9447,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 35664 39893 . - . ID=g12105;Name=g12105.t1 NODE_7_length_79538_cov_50.0942 . mRNA 35664 39893 . - . ID=g12105.t1;Parent=g12105;Name=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 39748 39893 . - . ID=g12105.t1.exon1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 39748 39893 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 39577 39651 . - . ID=g12105.t1.exon2;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 39577 39651 . - 1 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 39365 39483 . - . ID=g12105.t1.exon3;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 39365 39483 . - 1 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 38694 38794 . - . ID=g12105.t1.exon4;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 38694 38794 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 38460 38574 . - . ID=g12105.t1.exon5;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 38460 38574 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 38209 38328 . - . ID=g12105.t1.exon6;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 38209 38328 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 38039 38107 . - . ID=g12105.t1.exon7;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 38039 38107 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 37829 37930 . - . ID=g12105.t1.exon8;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 37829 37930 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 37664 37704 . - . ID=g12105.t1.exon9;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 37664 37704 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 37394 37527 . - . ID=g12105.t1.exon10;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 37394 37527 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 37174 37234 . - . ID=g12105.t1.exon11;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 37174 37234 . - 1 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 36688 36775 . - . ID=g12105.t1.exon12;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 36688 36775 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 36474 36547 . - . ID=g12105.t1.exon13;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 36474 36547 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 36301 36346 . - . ID=g12105.t1.exon14;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 36301 36346 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 35963 36213 . - . ID=g12105.t1.exon15;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 35963 36213 . - 2 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 35812 35885 . - . ID=g12105.t1.exon16;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . CDS 35814 35885 . - 0 ID=cds.g12105.t1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . exon 35664 35700 . - . ID=g12105.t1.exon17;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 35812 35813 . - . ID=g12105.t1.utr3p1;Parent=g12105.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 35664 35700 . - . ID=g12105.t1.utr3p2;Parent=g12105.t1 #PROT g12105.t1 g12105 MASLSGPCFFLRASDGLAVVGGALDGSPNRLGIDLSVPFVSLCFKMNNVEFGAAQKCTKFSPDGNLLASSDGSRVVIWNISGNAIARVIPQANVLQLVFSPKGSFLVTWERYAGIVTRLEAPGAAKIAVSQGPSGPHKLAVFVPGSKGAPSTVKLYNAAALSQGAPIASKSFYKADKVVLSWNPAGSAILIFAQTDVDTSGKSYYGETCLYLLRAGGDYDANIQLGKEGPIYDYAWSPDSKDFVVVYGFMPAKATLYDHTCKPIFDFGTGSRNTVQYNPHGNVIMLGGFGNLRGEMEFWDRRKLSVFAKCQASDSTHTEWCPDGTHILTCTTSPRLRVGNGYKVWRFSQQVASGQCQELWEARWQPRSMPAAVIPSVVAAAVSVQPLVQQASKPAAYRPPHLRGTDAPSQPSIKLHELEAPKRLDAAPAQAETLSKAALKNKKKREAKAKGEGEPPVPTATQAHTQGSPAQSPIAPATEDPELAKKIKNLTKKLKQIEVLREEKRSGKNLEVNQLQKLETEAALRAELVELESQLNR* # PASA_UPDATE: g12104.t1, single gene model update, valid-1, status:[pasa:asmbl_9445,status:3], valid-1 NODE_7_length_79538_cov_50.0942 . gene 31835 34011 . - . ID=g12104;Name=g12104.t1 NODE_7_length_79538_cov_50.0942 . mRNA 31835 34011 . - . ID=g12104.t1;Parent=g12104;Name=g12104.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 33893 34011 . - . ID=g12104.t1.utr5p1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . exon 33451 34011 . - . ID=g12104.t1.exon1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . CDS 33451 33892 . - 0 ID=cds.g12104.t1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . exon 32259 33354 . - . ID=g12104.t1.exon2;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . CDS 32259 33354 . - 2 ID=cds.g12104.t1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . exon 32052 32085 . - . ID=g12104.t1.exon3;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . CDS 32052 32085 . - 1 ID=cds.g12104.t1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . exon 31835 31954 . - . ID=g12104.t1.exon4;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . CDS 31853 31954 . - 0 ID=cds.g12104.t1;Parent=g12104.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 31835 31852 . - . ID=g12104.t1.utr3p1;Parent=g12104.t1 #PROT g12104.t1 g12104 METPVMSGVGRRFEIHVVEDVVPAPPTADATAAQMAGDSSASRPPNEGASSMARDEAEPIAAPAIVPAESSMAAAAVAGNKPARFRIVNVKEEEEEEQLSADYIEEPMASSSVVPSDGLPVGADNVPARRFVVETVEDDSLVSDSRAAERATDLSVSENAPEDTERQGVAQISDKEPKELNMRMDSSHIDADDESDEAGAPARRTRFHVKDVNSGDEGTAAPRMRPRRFLIVDVGDDKPRAKAQSLMNPVRYKRGRFTVRDCVELPNASGPASVQQPTQLSAATPATQPPATQQPPPPSSSTSSSLSSGAPPSALGHSHAPSSFASPSLSNAAAPTQTGVAAPPVTGRAAPPAARKSLAAGGTGTPPGSPTQPATLMALDGSLGRGRADGDPRDLVALPPPAIAGDASSFDAAAGGHEQERSDGFALGVATRADMQGQQGQGQAQSSQPSNAHGVGTGGALAAGRPSAGSGAATAASLQQKIDVLVQQGVQQQKMLIRLLELLRRPQDDDAGGPKDHSRVLDTLDDLRRQVNALKLENESLRNENASLKRLASQSQA* # PASA_UPDATE: g12113.t1, single gene model update, valid-1, status:[pasa:asmbl_9450,status:12], valid-1 NODE_7_length_79538_cov_50.0942 . gene 66233 67547 . - . ID=g12113;Name=g12113.t1 NODE_7_length_79538_cov_50.0942 . mRNA 66233 67547 . - . ID=g12113.t1;Parent=g12113;Name=g12113.t1 NODE_7_length_79538_cov_50.0942 . five_prime_UTR 67419 67547 . - . ID=g12113.t1.utr5p1;Parent=g12113.t1 NODE_7_length_79538_cov_50.0942 . exon 67260 67547 . - . ID=g12113.t1.exon1;Parent=g12113.t1 NODE_7_length_79538_cov_50.0942 . CDS 67260 67418 . - 0 ID=cds.g12113.t1;Parent=g12113.t1 NODE_7_length_79538_cov_50.0942 . exon 66233 66930 . - . ID=g12113.t1.exon2;Parent=g12113.t1 NODE_7_length_79538_cov_50.0942 . CDS 66580 66930 . - 0 ID=cds.g12113.t1;Parent=g12113.t1 NODE_7_length_79538_cov_50.0942 . three_prime_UTR 66233 66579 . - . ID=g12113.t1.utr3p1;Parent=g12113.t1 #PROT g12113.t1 g12113 MSLLASSPALAAAVRATFARLVVPARTYSNSANAAEKSGATEVVVKEQSTFVTAPLTAVTGVPEEHVRRPVRIFVPGRSTTQSGTNSSKRWRMEFDSPDRWENPLMGWSSAADPLSNLGLEFDSREQAVEFAQKNGWEVHVEDKTVIKRIKKNYGTNFAWNARTRVSTK* # ORIGINAL: g12114.t1 original gene structure, not modified by PASA NODE_7_length_79538_cov_50.0942 AUGUSTUS gene 67758 72411 . - . ID=g12114;Name=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS mRNA 67758 72411 . - . ID=g12114.t1;Parent=g12114;Name=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 72106 72411 . - . ID=g12114.t1.exon1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 72106 72411 . - 0 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 71751 71954 . - . ID=g12114.t1.exon2;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 71751 71954 . - 0 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 71195 71588 . - . ID=g12114.t1.exon3;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 71195 71588 . - 0 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 70406 71083 . - . ID=g12114.t1.exon4;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 70406 71083 . - 2 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 69980 70273 . - . ID=g12114.t1.exon5;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 69980 70273 . - 2 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 69382 69818 . - . ID=g12114.t1.exon6;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 69382 69818 . - 2 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 68750 69072 . - . ID=g12114.t1.exon7;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 68750 69072 . - 0 ID=cds.g12114.t1;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS exon 67758 68655 . - . ID=g12114.t1.exon8;Parent=g12114.t1 NODE_7_length_79538_cov_50.0942 AUGUSTUS CDS 67758 68655 . - 1 ID=cds.g12114.t1;Parent=g12114.t1 #PROT g12114.t1 g12114 MKRGFLIRGASAEDGQNGDGSASGATGSGGVGHRTVQLVQLEKPKRPSAAEVTHADAHVVVHPPVHTQHAQPQLHAHAHSHGQAHQQSRPHPAPIQAPMPPPSSHAEPLNKTQGRLRQKLSERQGDRKDAPAYPQTAVSGHGTHQHAPPHSHVYNGAAADLPIDLRRVQETKWTQPNLDRGFRPSLPSFERKGSDPSSMAAASADSHAAPKIVAPRPLVLMAPPKMSAVSSTGFRVSWTAPIDTPTPVTLYQLEMDSGSGSFVRQFEGTGLSTEVSGLRPGKTYRVRVLAMCDDSKSQYSQVVSATTLSTAPSVPEPPRLCGRTKNTLSLKWVPPADNGSTVTSYRLEWDEGTDGSTFIPEYQGPMLTHKIVGAQIKSGHKYSFRVAAENAVGWSPLSEVVAYYTSATVPSTPDAPQLVASSIDSLTVRWKAPLDNGSPISEYRVEMSRPDEEYGFRAAYSGDKTEFCAKGLKRNAEYALRVLAINAQGESKCSAVSLFTTRAAVPGAPNQPRTVGVLASDSINVAWDVPKDDGGAEIVSSRLELDRGDGLGFRLEYEGPLQSHRVQSLVPGTPHTLRVQCANESGFGPFSPELKTRTAAVPPGAPEALSASSIKSRPDALAVKWGAPSYNGGAQVSSYILEISEADSAAYRAVYSGPNTVATVEALHPGRSYRLRCVAVNSAGKSTATGDAAARTAASAPAPPPALSVTCTATGAVVSWQAPADNGSPIGEYRIEMTSGTAAVKHFSAGTATTYEVKGLVPASEYRFAVQALSSAGAGPLCTAVGASTLASPPSAPSSLTVTGVSASGASISWTAPRENGAAVTSYRLEVVAVSGDATPHVTEAQGSTAHADVGGLRADEGYRVRVQAANRLGMGPFSSFVSFQTAQLPPGQPSLEEGGVSHNSIKVKWSAPKGVGADADVEYTLEMRATGGKAQQSFVEVYRGPLRQFKATKLRAASQYAFRVRAANPAGEGPWSATAGSATLPEPLPQLPVPRAKGGSITWAPVPATTATAAAAPSKGAAESPRYELQRQRVGVDADFVTVYTGNDTAWPQGSDHAVGQVLYRVRIVVGDACGPYSAVMRGGAAEVPVTSKDGRDKDHDAAGADRKDGKADARKRKAEDSGVDTDDTRSGPATHSDSYSHSHVGHSRVLELVLPLALVCTSLAVSYLQSLVMGV* # PASA_UPDATE: g12053.t1, single gene model update, valid-1, status:[pasa:asmbl_5575,status:12],[pasa:asmbl_5577,status:12], valid-1 NODE_310_length_27350_cov_27.0675 . gene 18870 24872 . + . ID=g12053;Name=g12053.t1 NODE_310_length_27350_cov_27.0675 . mRNA 18870 24872 . + . ID=g12053.t1;Parent=g12053;Name=g12053.t1 NODE_310_length_27350_cov_27.0675 . five_prime_UTR 18870 18981 . + . ID=g12053.t1.utr5p1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 18870 19007 . + . ID=g12053.t1.exon1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 18982 19007 . + 0 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 19110 19286 . + . ID=g12053.t1.exon2;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 19110 19286 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 19498 19569 . + . ID=g12053.t1.exon3;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 19498 19569 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 19918 19989 . + . ID=g12053.t1.exon4;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 19918 19989 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 20087 20158 . + . ID=g12053.t1.exon5;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 20087 20158 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 20582 20653 . + . ID=g12053.t1.exon6;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 20582 20653 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 20747 20813 . + . ID=g12053.t1.exon7;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 20747 20813 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 21034 21441 . + . ID=g12053.t1.exon8;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 21034 21441 . + 0 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 21688 21817 . + . ID=g12053.t1.exon9;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 21688 21817 . + 0 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 22150 22914 . + . ID=g12053.t1.exon10;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 22150 22914 . + 2 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 23090 23267 . + . ID=g12053.t1.exon11;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 23090 23267 . + 2 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 23488 23695 . + . ID=g12053.t1.exon12;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 23488 23695 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 23854 23954 . + . ID=g12053.t1.exon13;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 23854 23954 . + 0 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 24148 24278 . + . ID=g12053.t1.exon14;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 24148 24278 . + 1 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 24415 24482 . + . ID=g12053.t1.exon15;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 24415 24482 . + 2 ID=cds.g12053.t1;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . exon 24585 24872 . + . ID=g12053.t1.exon16;Parent=g12053.t1 NODE_310_length_27350_cov_27.0675 . CDS 24585 24872 . + 0 ID=cds.g12053.t1;Parent=g12053.t1 #PROT g12053.t1 g12053 MLAVAEAAFRHGYVAVHSIDNRGSTWVVAVCLLLLYQTEDVLAACPNTCTCNGGAVLSCAFTPGTTSLDWSSKQLTSIASGLFDGLPGLQNLSLTSNQIATLPSGIFDKLTALTGLDLGSNQIATLPSGIFDKNTALTQLYLHFNQIATLPSGIFDKNTALDTLDLFSNQIATLPSGIFDGLSKLQAPHARQSALQEPLDRIVPCPAAVKMERLATVLLERAHALLGGRAQTATKSVQAVVLAPTAAVLALARTAQRATVSLERAHALLGGRAQTATKFVQAIVLAPTVWGSAHARTQQRATDSMVLAHARKGRAFTDRRVQHAHATVEFAMMASSAMELATAMPFWESEAPTVTQPVIVFPERKSNSISTPCITQVGDVLTFLDTDVVVNLGYAYYVTAYNIKNVASETAGVAAIQRLELRELPSPPYNVSSTPTLNPDNQKSMIKFTWKEDTSSGPIIKTFIFRDGRLVLEGLMATEYKDFNVEYGKTYIYEIISMNQYGNSTATRFNETASIGPSDSDSATGTSSSGNVTGPVAGGVVGAIVGAAGIVLAILYVRKRTSRKKMEALDRSRDALAGSGDLDIEDASYMRALTVLKQSDGDGGMEGHDLYATIDADGVIDEILRERIRLGDNIGSGNFGDVWRATLDPGGLVTAVKSLKGNASPEQNRLFVMEAKLMAELQHPNIVRILGIVTHGKPMLLVLEFMANGSLLSYLETKKDDLSRKTLMCMCRDIAAGMVVLERRGLVHRDLAARNILIDSDGTCKIADFGLARHLDSDYYISTSSQKIPVKWTAPEAIAFRKFSSYSDVWAFGIVCWEIFALGDKPYGQMTNAEALDMLEKGRRLAKPEMANDRIYAAMMSCWAVEPRDRPQFIKVFSEFQGMILGQSRASQLPSGANDGYIELDPAEAYALYVKPSLPTVQNPIFQQNTTDFDLTRQRLYTLQ* # ORIGINAL: g12050.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 8261 8950 . + . ID=g12050;Name=g12050.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 8261 8950 . + . ID=g12050.t1;Parent=g12050;Name=g12050.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 8261 8413 . + . ID=g12050.t1.exon1;Parent=g12050.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 8261 8413 . + 0 ID=cds.g12050.t1;Parent=g12050.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 8675 8950 . + . ID=g12050.t1.exon2;Parent=g12050.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 8675 8950 . + 0 ID=cds.g12050.t1;Parent=g12050.t1 #PROT g12050.t1 g12050 MPRAHGGHVGVQEAGCEALWCIGVNTDNKVSIAQEGGIAAILSAMRAHGGHENGCWALWNIGTNADNKVSIAREGGIVVILSAMRMHGGHVGVQEAGCGALRSIGLNADNKVSIAQTGGIAAILSAMCKHGGHAGVQEAAGR* # ORIGINAL: g12049.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 6418 7143 . + . ID=g12049;Name=g12049.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 6418 7143 . + . ID=g12049.t1;Parent=g12049;Name=g12049.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 6418 7143 . + . ID=g12049.t1.exon1;Parent=g12049.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 6418 7143 . + 0 ID=cds.g12049.t1;Parent=g12049.t1 #PROT g12049.t1 g12049 MWTRRITSITNLRGCVKDSKEWEKFLSSKNYIVNRVPELHATYENVVELLGATCPFIFVFAGHGSWMADATTKTQHQAIHLRDQPLCVQDILTNRLCRGVVLDCCFAGSQTSNVLASNSVDLTSCELVNPPPQPVSDSFSRNRFYGPSSNSEMCELHIRDDQFYFAASEWDSPSLELDFEIIGVRGVFSTFALHSLKSNPAGPIIDRSGRNDVSNAHTDVVDYAERLNLSPPKLGGTAPTF* # ORIGINAL: g12048.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 4417 5279 . - . ID=g12048;Name=g12048.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 4417 5279 . - . ID=g12048.t1;Parent=g12048;Name=g12048.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 4859 5279 . - . ID=g12048.t1.exon1;Parent=g12048.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 4859 5279 . - 0 ID=cds.g12048.t1;Parent=g12048.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 4417 4739 . - . ID=g12048.t1.exon2;Parent=g12048.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 4417 4739 . - 2 ID=cds.g12048.t1;Parent=g12048.t1 #PROT g12048.t1 g12048 MTLHLLTVDKTFYPVGLRKFESRIVRIDRHPPHHRLCSSSTVPRAQTRVTAPLEMGFACLGLLMLCAVLQCASNAIAETAALSVASTNETATVRVSGSGKSLVLDAGDKGTIWFNSSIDGAAVKALKRIDDLENKVKALESATDGILSCGPPHPTYGHVVFNTAKNTNKTAVGLDSPLEFWNIPYAQRFQSRGTCNSSLSTNCYCPSAYVRFAPSLVVRVTDVMADLAGTETVLFKATAAGIDPTMM* # ORIGINAL: g12046.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 1 897 . - . ID=g12046;Name=g12046.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 1 897 . - . ID=g12046.t1;Parent=g12046;Name=g12046.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 1 897 . - . ID=g12046.t1.exon1;Parent=g12046.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 1 897 . - 0 ID=cds.g12046.t1;Parent=g12046.t1 #PROT g12046.t1 g12046 MQGIAGMAAQIAAFALALAHFVSYAEAADYAWAAGQSGGRWDNGSLWLRHPLTPATPLFPCTEQVTNLPILSTVAIGGRARSAVVQVSKGAVMQIASGGTLQLRANRPDAPYCSVASRGPSQGPRVSSTLLPPQTYVFVESEWASKLDLASLFVNSNDGESLVYNVSWTTLNASSGSSIRFDTTTSSLKVFFPTMGAARDAGAGNGINLTVAAMTSSPVPAMQWTVIRATPSLVVTGISDVILQYEARKRFQGFSGIHVSTPPGRVLRVRFDIDRIGNGELVGGGINSTFTNPPSGNIT # ORIGINAL: g12051.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 10174 12179 . + . ID=g12051;Name=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 10174 12179 . + . ID=g12051.t1;Parent=g12051;Name=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 10174 10274 . + . ID=g12051.t1.exon1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 10174 10274 . + 0 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 10379 10450 . + . ID=g12051.t1.exon2;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 10379 10450 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 10600 10701 . + . ID=g12051.t1.exon3;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 10600 10701 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 10959 11030 . + . ID=g12051.t1.exon4;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 10959 11030 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 11124 11195 . + . ID=g12051.t1.exon5;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 11124 11195 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 11451 11522 . + . ID=g12051.t1.exon6;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 11451 11522 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 11774 11845 . + . ID=g12051.t1.exon7;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 11774 11845 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 11939 12010 . + . ID=g12051.t1.exon8;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 11939 12010 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 12104 12179 . + . ID=g12051.t1.exon9;Parent=g12051.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 12104 12179 . + 1 ID=cds.g12051.t1;Parent=g12051.t1 #PROT g12051.t1 g12051 MLRVKTNDCRDWTGKQLTSIASGLFDGLPGLTELFLGGNQIATLPSGIFDKLTALTKLSLGGDRFAGDRFAVNQIATLPSGVFDKLTALTDLALNSNQIATLPSGIFDKLTALTGLDLNSNQIAALPSGIFDQLTALRQLDLNRNQIATLPSGTFDKLTALLKLWLDSNQIATLPSGIFDKLTALTQLYLYSNQIATLPNGIFDKLTALTQLWLYSNQIATLPSGIFDKLTALDTL* # ORIGINAL: g12052.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 14899 18055 . + . ID=g12052;Name=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 14899 18055 . + . ID=g12052.t1;Parent=g12052;Name=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 14899 15040 . + . ID=g12052.t1.exon1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 14899 15040 . + 0 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 15129 15535 . + . ID=g12052.t1.exon2;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 15129 15535 . + 2 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 15635 16316 . + . ID=g12052.t1.exon3;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 15635 16316 . + 0 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 16408 16848 . + . ID=g12052.t1.exon4;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 16408 16848 . + 2 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 16987 17035 . + . ID=g12052.t1.exon5;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 16987 17035 . + 2 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 17117 17305 . + . ID=g12052.t1.exon6;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 17117 17305 . + 1 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 17439 17572 . + . ID=g12052.t1.exon7;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 17439 17572 . + 1 ID=cds.g12052.t1;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 17685 18055 . + . ID=g12052.t1.exon8;Parent=g12052.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 17685 18055 . + 2 ID=cds.g12052.t1;Parent=g12052.t1 #PROT g12052.t1 g12052 MCDVQCRRGQYGPNCALTCPCGDGTCDRFNGTCTCKARSGFYGPSCSTCACNSGVCDDGFLGNGTCDCNALLGIGGPNCNTTCDRLPGAQVWGAGCSKPCVCENGAACNAFTGECTCAFGWTGVVCNLIVAPSVPKVNATAELSQYGVGIRLNWYHDDVGPRAWNNSWRYEISRGGCFPKIYQVGDVLTFLDTDVAINQGYTYFVTAYNSKNVPSEAPAVAAIKSLQKTDLPSPPYNVSSTPTLNPDNQKSMIKFTWKEDTSSGPIINTFIFRDGRLVLQGRMATEYKDRDVVFGKTYVYEIISVNQYGNSTATRFSETASIGPTDAGATAGASSSSNVAGPVAGGVVGAIVGAAGIVLAILFVRKRTSRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSSDEIRSARSAFMAEIDLMRTIPNHPNIIELLGVCTQVGDQTVRSIPSNPSTLSVDFVTYIVIALTPALPFLSQSDPNCMVLEFAAHGDLRHFLSDSKVSDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSIENGWKLSPKAQVIVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMETCWRKHAETRPQFSQLVLQLRRGMAALCGTDGGVGGVGVNSDGANPIDGLSGGQSETYALTVPESAYAETLKPDEEGHLHTLENVMFQKDGGSTGHSSA* # ORIGINAL: g12047.t1 original gene structure, not modified by PASA NODE_310_length_27350_cov_27.0675 AUGUSTUS gene 1730 3460 . + . ID=g12047;Name=g12047.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS mRNA 1730 3460 . + . ID=g12047.t1;Parent=g12047;Name=g12047.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 1730 2968 . + . ID=g12047.t1.exon1;Parent=g12047.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 1730 2968 . + 0 ID=cds.g12047.t1;Parent=g12047.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS exon 3296 3460 . + . ID=g12047.t1.exon2;Parent=g12047.t1 NODE_310_length_27350_cov_27.0675 AUGUSTUS CDS 3296 3460 . + 0 ID=cds.g12047.t1;Parent=g12047.t1 #PROT g12047.t1 g12047 MLVAIIVAALCGPSLVLSETCEVKATLDDDLVLSTPPGRSIRLDSDVYYNGETATLQAKIASLNDQIRALKSCRIVSAPSLVASAWDYVASAGTAGLSGMRVFNGNVFVGRSDGLLTIYRVQPSGALLSVGTKTMTGFGTPAKYSLADIAENPVTKHLYIAWTCAGAGCPSVSAPSFGLIEIVDVSDLTSPIRLGFFDKIPGSLTAIVFVPASAVVGSKPLIVTSESKAGASINGMRALDVSNPSAPVQIGNALTPTMPNNMVAQMGDMKLLRGSIVAVSAWQDCELIIFDVGNPAVGIVERGRRSCRSDDSVQMNAAFAYPISYALTRLDTAGTILAMGLVQLYPKGNPGFMIYNTSNPSSIVALSPIVMTTSETNASPHAMFSMQNGRYLVIFHDAMGPAEYTGTTRPMDNGIYVFDLLDITSPKAVALVPVPKISSVQPLSNSTVVAVTSDGNILVYKLFENCD* # ORIGINAL: g8943.t1 original gene structure, not modified by PASA NODE_3808_length_2709_cov_95.9313 AUGUSTUS gene 133 2367 . + . ID=g8943;Name=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS mRNA 133 2367 . + . ID=g8943.t1;Parent=g8943;Name=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 133 238 . + . ID=g8943.t1.exon1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 133 238 . + 1 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 494 602 . + . ID=g8943.t1.exon2;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 494 602 . + 0 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 1000 1121 . + . ID=g8943.t1.exon3;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 1000 1121 . + 2 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 1245 1332 . + . ID=g8943.t1.exon4;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 1245 1332 . + 0 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 1594 1748 . + . ID=g8943.t1.exon5;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 1594 1748 . + 2 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 1873 1938 . + . ID=g8943.t1.exon6;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 1873 1938 . + 0 ID=cds.g8943.t1;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS exon 2194 2367 . + . ID=g8943.t1.exon7;Parent=g8943.t1 NODE_3808_length_2709_cov_95.9313 AUGUSTUS CDS 2194 2367 . + 0 ID=cds.g8943.t1;Parent=g8943.t1 #PROT g8943.t1 g8943 RQFIREGQLLRRKRDTRDRLERYFFLFNDVLVVSQHKGDKAYKLKERVMLYEAWVGNETQGPELSEKDVARSFIVGTPHRIYHLTAETEEERAGWVADITRHILTQKENFSRVLARLDIPDNFSSGLIIKAKMDYKGMCDAELSFSRDDEILVVSGLFDPEFDPNEEWWQGMYGTAYGWFPSGVMRGEEDTEQEKPKEVSLNMDQILSIKKKHRLLRHTFFSQIPDDPKKTSLIKLHLIDNTFKSFMAPVSAKTREVIKIYFEKTKKVLAYV* # ORIGINAL: g10371.t1 original gene structure, not modified by PASA NODE_563_length_21160_cov_44.1787 AUGUSTUS gene 19173 20774 . - . ID=g10371;Name=g10371.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS mRNA 19173 20774 . - . ID=g10371.t1;Parent=g10371;Name=g10371.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 19173 20774 . - . ID=g10371.t1.exon1;Parent=g10371.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 19173 20774 . - 0 ID=cds.g10371.t1;Parent=g10371.t1 #PROT g10371.t1 g10371 MRPNRFFAAGFALFVSGAILFAVSEFERSRPLVISTNVEWRNPGSSYTADDGSVAHMFDEVTETRMQQFASSSRPTVAVFVGTRPEAVKLAPLVAEMRRDSNAAVFNTAVISTGQHREMLLQMFQSFHIDVDVELSLMRPDQTPAGLLARALDATTAVLQRIQPAVVIVQGDTTTALAGALAAFFLRIPVAHVEAGLRSYDMDNPFPEELNRRAIDGFAAFHFAPTEYAAEALRREAICGREIHVTGNTGVDAILHALKRSPPPAAENILSMLDSAETVVLVTSHRRENLGGPLANICRAIRRLVTDYPSVTVVFPVHLNPNVRKVVHTLLRGVPRVITLDPLSYDILPFVMRRADLIMSDSGGIQEEAVSIGKPVILLRRTTERPEGVFAGTVRISGTDEQDLYDRGSSMLDNLVSITASLRAQNVFGYGNASQITSNVLRNFLQLSPEKRAELLSGCTDKKQGELAQAVYGFDALKKSREDNAVPRKDVKTAADAVLDGVDESAVRMSLSESKRVDERGATEPEASALPRM* # PASA_UPDATE: g10366.t1, single gene model update, valid-1, status:[pasa:asmbl_8203,status:3], valid-1 NODE_563_length_21160_cov_44.1787 . gene 112 3158 . + . ID=g10366;Name=g10366.t1 NODE_563_length_21160_cov_44.1787 . mRNA 112 3158 . + . ID=g10366.t1;Parent=g10366;Name=g10366.t1 NODE_563_length_21160_cov_44.1787 . five_prime_UTR 112 231 . + . ID=g10366.t1.utr5p1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . exon 112 289 . + . ID=g10366.t1.exon1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . CDS 232 289 . + 0 ID=cds.g10366.t1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . exon 525 713 . + . ID=g10366.t1.exon2;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . CDS 525 713 . + 2 ID=cds.g10366.t1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . exon 1013 1206 . + . ID=g10366.t1.exon3;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . CDS 1013 1206 . + 2 ID=cds.g10366.t1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . exon 1472 1735 . + . ID=g10366.t1.exon4;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . CDS 1472 1735 . + 0 ID=cds.g10366.t1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . exon 2063 3158 . + . ID=g10366.t1.exon5;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . CDS 2063 3070 . + 0 ID=cds.g10366.t1;Parent=g10366.t1 NODE_563_length_21160_cov_44.1787 . three_prime_UTR 3071 3158 . + . ID=g10366.t1.utr3p1;Parent=g10366.t1 #PROT g10366.t1 g10366 MDLPFEARAKPDFVIGTRPDPVVHEAVGGGKFSFALDAPPDVPVSVAVTCSQKILAFEPCRLNFTLDDWWIQREVKMSFVKPGAGKIWLTADANGGNYHRYSTECFVVTTVSKPGVDIKGLPPVLHEAEGCVELKVKLTTCPTAPVQVRMSTQTPVVTLHAYPHVLSFNKDDWNRPKTVTMQYVKAGQTTLTLRADANGGNYNGLVIVTPPLKTEKQPGFVVDGLPPVIYQEVVQIDCKIRMDTAPTAFTSVTPTSMQRTVSFSPPHITFSPFDWNETKVVTITFIRSGSDEIILACDANGGNYNCVRSRIAPLSTVRRMKSLPIAHSSDPVDSFFLTRNRRERAKGRAVNVHAPVTGWDGRHLPVDASSSSRAAGNRPPSPRRSPSPTYRSPTQSPPVSPRGARTSPLYAAPASVVPPQRAGTGFSTRLPAMVSPTRQQSPDRSERIRDPNVFGGPFQLDPNMPPPPAVFYYVQHGGGRMHTAVEQGGNNYGYVSQKAQVVPQAPSTSTRRAKERDRDLHLPLMATTPSHVAHGGSRRPAYQPPPSSEHSVVTAWGNPVSPPMHMARMG* # ORIGINAL: g10367.t1 original gene structure, not modified by PASA NODE_563_length_21160_cov_44.1787 AUGUSTUS gene 3405 4325 . - . ID=g10367;Name=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS mRNA 3405 4325 . - . ID=g10367.t1;Parent=g10367;Name=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 4162 4325 . - . ID=g10367.t1.exon1;Parent=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 4162 4325 . - 0 ID=cds.g10367.t1;Parent=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 3715 3981 . - . ID=g10367.t1.exon2;Parent=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 3715 3981 . - 1 ID=cds.g10367.t1;Parent=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 3405 3438 . - . ID=g10367.t1.exon3;Parent=g10367.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 3405 3438 . - 1 ID=cds.g10367.t1;Parent=g10367.t1 #PROT g10367.t1 g10367 MPSLSTIEPQQGQQEQDPMGSSWGELQSAIDAGASMSTLFALDGWSAAPPAPVKSVPNMPDAPRGIPKGFSATAHARDAQPRNKQRSRPPSITDDPRQGILEALTQLPLYCATFDPFGPSGFGATFEPPPMPVVLPLVALAPKIFVRPGDVSAE* # PASA_UPDATE: g10370.t1, single gene model update, valid-1, status:[pasa:asmbl_8205,status:3], valid-1 NODE_563_length_21160_cov_44.1787 . gene 16770 19053 . + . ID=g10370;Name=g10370.t1 NODE_563_length_21160_cov_44.1787 . mRNA 16770 19053 . + . ID=g10370.t1;Parent=g10370;Name=g10370.t1 NODE_563_length_21160_cov_44.1787 . five_prime_UTR 16770 16794 . + . ID=g10370.t1.utr5p1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 16770 16871 . + . ID=g10370.t1.exon1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 16795 16871 . + 0 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 16962 17027 . + . ID=g10370.t1.exon2;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 16962 17027 . + 1 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 17292 17406 . + . ID=g10370.t1.exon3;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 17292 17406 . + 1 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 17675 17779 . + . ID=g10370.t1.exon4;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 17675 17779 . + 0 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 18110 18226 . + . ID=g10370.t1.exon5;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 18110 18226 . + 0 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 18566 18731 . + . ID=g10370.t1.exon6;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 18566 18731 . + 0 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . exon 18979 19053 . + . ID=g10370.t1.exon7;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . CDS 18979 19022 . + 2 ID=cds.g10370.t1;Parent=g10370.t1 NODE_563_length_21160_cov_44.1787 . three_prime_UTR 19023 19053 . + . ID=g10370.t1.utr3p1;Parent=g10370.t1 #PROT g10370.t1 g10370 MSDEERVSEEDQDADFGTSVLGTKEYWDKVYKRELKNFEEHGDVGEVWFGIDAVEKVVDWLVDEGIDRELSILDVGCGNGVMLHELSKSGFTSLYGIDYSELSIALSKAIAEQEGFEATFAVVDFLADVAALPDQPYDISVDKGTYDAISLSENAPEARSSYIENVVKVTKPGGLVIITSCNWTEDEVKRDFTASPHLKYKTRLKYPVFEFGGKKGQTICTVVFTRTTE* # PASA_UPDATE: g10368.t1, single gene model update, valid-1, status:[pasa:asmbl_8204,status:12], valid-1 NODE_563_length_21160_cov_44.1787 . gene 4900 9838 . + . ID=g10368;Name=g10368.t1 NODE_563_length_21160_cov_44.1787 . mRNA 4900 9838 . + . ID=g10368.t1;Parent=g10368;Name=g10368.t1 NODE_563_length_21160_cov_44.1787 . five_prime_UTR 4900 4911 . + . ID=g10368.t1.utr5p1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 4900 4936 . + . ID=g10368.t1.exon1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 4912 4936 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 5175 5251 . + . ID=g10368.t1.exon2;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 5175 5251 . + 2 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 5613 5672 . + . ID=g10368.t1.exon3;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 5613 5672 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 5884 5988 . + . ID=g10368.t1.exon4;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 5884 5988 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 6200 6318 . + . ID=g10368.t1.exon5;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 6200 6318 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 6567 6747 . + . ID=g10368.t1.exon6;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 6567 6747 . + 1 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 7061 7207 . + . ID=g10368.t1.exon7;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 7061 7207 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 7435 8402 . + . ID=g10368.t1.exon8;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 7435 8402 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 8701 8890 . + . ID=g10368.t1.exon9;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 8701 8890 . + 1 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 9103 9215 . + . ID=g10368.t1.exon10;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 9103 9215 . + 0 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . exon 9467 9838 . + . ID=g10368.t1.exon11;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . CDS 9467 9665 . + 1 ID=cds.g10368.t1;Parent=g10368.t1 NODE_563_length_21160_cov_44.1787 . three_prime_UTR 9666 9838 . + . ID=g10368.t1.utr3p1;Parent=g10368.t1 #PROT g10368.t1 g10368 MPDYEGDKATLVRFLKEFAARDDGHLKYKYLAQLTKIANRQQSIITINLDDLYDFEEEALVESIENNTRRYTSLLEDAIDEAMPQTELAFDADGAGVMEIFLHHRQTLQANNAQNPGRRSYPPALLRRYEVYITPRNKAKAVAIREVKASCIGKLICIRGIVTRVTEVKPMVTVATYTCDRCSVELYQEVNGPHFMPLVQCQSETCMRNNSPGQLFMQTRGSKFTRFQELKIQEISDQVPVGHIPRTMTVHLRGELTRTATAGDVVTITGVFLPTPYAGFRAIRAGLLSDTYLEAHDIKKSKRTAEDGVDALAGVDEATKERIDRMSGDASLYDRMATSIAPEIYGHLDVKKALLLLLVGGVSRNMSDGMKIRGDLNVCLMGDPGVAKSQLLKYISTVAPRGVYTTGKGSSGVGLTAAVTRDPFTGEMVLEGGALVLADKGVCCIDEFDKMEEGDRTAIYEVMEQQTISIAKAGITTTLNARTSILAAANPAWGRYNPTKSAAANINLPAALLSRFDLLFLILDRPDPEKDLKLAEHITFLHKEGVHPKLNFEPLDAAFMRHYIAKARTFEPRIPANLNDYIVSLYLEMRNSMRDASKESYKQEGLLYASARSLLAVLRLSTALARLRFSEDVNADDIEEAMRLLTYSRVSLKDEEDKERQAKDDVGARVLEIIKSLVGADKTVAVNRVQDKARQRGITAEQLQAVFDEYTETDVLMFVGSRLKLCA* # ORIGINAL: g10369.t1 original gene structure, not modified by PASA NODE_563_length_21160_cov_44.1787 AUGUSTUS gene 11195 13439 . - . ID=g10369;Name=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS mRNA 11195 13439 . - . ID=g10369.t1;Parent=g10369;Name=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 13052 13439 . - . ID=g10369.t1.exon1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 13052 13439 . - 0 ID=cds.g10369.t1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 12410 12886 . - . ID=g10369.t1.exon2;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 12410 12886 . - 2 ID=cds.g10369.t1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 12239 12314 . - . ID=g10369.t1.exon3;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 12239 12314 . - 2 ID=cds.g10369.t1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 11914 12099 . - . ID=g10369.t1.exon4;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 11914 12099 . - 1 ID=cds.g10369.t1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 11677 11810 . - . ID=g10369.t1.exon5;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 11677 11810 . - 1 ID=cds.g10369.t1;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS exon 11195 11544 . - . ID=g10369.t1.exon6;Parent=g10369.t1 NODE_563_length_21160_cov_44.1787 AUGUSTUS CDS 11195 11544 . - 2 ID=cds.g10369.t1;Parent=g10369.t1 #PROT g10369.t1 g10369 MCTCTAGWTDANCGQACASGRFGANCTRLCTCRNVAACDRFNGDCTVGVSLSGNVASSVAGPVAGGVVGAVVGAAAIVFIILFVRKRTARKKMEALTFRAPPDRHRRATPRDSRDRNSGSCIRLRNRIGEGEFGEVFLADIMPRDGSIAVIKAAVKTFKVTSLSSTDEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQVILSRLYGMMASQKSSRLAALTVLSSRSIKCQWFIRALNHIGDDISSSTERSNCMVLEFAAHGDLRHFLTSSKFIDLTSVDLLCFCNVVMLTASSMQTLRGMEHLAKCGIVHRDLAARNCMVAAGPRAPSTLETGLKLSPKAQVIVKVADMGLSRETGATDYYAAKTRRKLPVKWMAPESLEKRILTHASDVWSLGIVMWEVFARGAKPYPGLENHAVSTYLSQHKRMGPPKGCPNLAYAIMESCWRRHAETRPQFSQLVLQLRQGMTTLSAAMDCSGATIGRDNSGAADATNSSVVVAVVPALGAAYAEIQMNSDEEAESLNTLQNPIFQQGQP* # PASA_UPDATE: g13150.t1, single gene model update, valid-1, status:[pasa:asmbl_4224,status:12], valid-1 NODE_239_length_29886_cov_41.589 . gene 15678 17457 . + . ID=g13150;Name=g13150.t1 NODE_239_length_29886_cov_41.589 . mRNA 15678 17457 . + . ID=g13150.t1;Parent=g13150;Name=g13150.t1 NODE_239_length_29886_cov_41.589 . exon 15678 16339 . + . ID=g13150.t1.exon1;Parent=g13150.t1 NODE_239_length_29886_cov_41.589 . CDS 15678 16339 . + 0 ID=cds.g13150.t1;Parent=g13150.t1 NODE_239_length_29886_cov_41.589 . exon 16508 17457 . + . ID=g13150.t1.exon2;Parent=g13150.t1 NODE_239_length_29886_cov_41.589 . CDS 16508 17294 . + 1 ID=cds.g13150.t1;Parent=g13150.t1 NODE_239_length_29886_cov_41.589 . three_prime_UTR 17295 17457 . + . ID=g13150.t1.utr3p1;Parent=g13150.t1 #PROT g13150.t1 g13150 MSTTKGGSLNLPFTAEAKATRYGTLDATDDDAPYDAEGATKVSIAIDGGNATLFSSFSNLGTGALGVGILSYPFAFSSAGIVPTILSTLFFALINLYTISLVSRFAQRHARALRLRTYEELVNAAIGRRAYGLAVFSVWGISIGALTGYFIILGDLATPVIEHWFNHDETTFYASRTFLVIVVGAAIIFPLSLGRDIHALAVTSAIAILSIVAVVVVLAVRGGQYVADNGGVHESVKVVHAGTGIVTSMPLCIFALCCHLQVVPVFTELPLPKRARFSRVSISTIVMCSSLYIASGIFGYILFGEDVKGDVLASFSPSDTVANVAKVLMVVHVVLAYPVALFPVRKAIDVLLLHTGGHQPTFTRTIIQNIGVIALTGVLAVAFPRIEKVFDIVGATTGVMITIIFPAWMLLKNKPAEDFGTEAEPIVTAERASLITTVDSTDGISYAVTDVDSKHRQKAIVLLVVGAVTGVVCLGVNIYSFM* # PASA_UPDATE: g13149.t1, single gene model update, valid-1, status:[pasa:asmbl_4223,status:12], valid-1 NODE_239_length_29886_cov_41.589 . gene 9083 11137 . - . ID=g13149;Name=g13149.t1 NODE_239_length_29886_cov_41.589 . mRNA 9083 11137 . - . ID=g13149.t1;Parent=g13149;Name=g13149.t1 NODE_239_length_29886_cov_41.589 . exon 10606 11137 . - . ID=g13149.t1.exon1;Parent=g13149.t1 NODE_239_length_29886_cov_41.589 . CDS 10606 11137 . - 0 ID=cds.g13149.t1;Parent=g13149.t1 NODE_239_length_29886_cov_41.589 . exon 9083 10411 . - . ID=g13149.t1.exon2;Parent=g13149.t1 NODE_239_length_29886_cov_41.589 . CDS 9414 10411 . - 2 ID=cds.g13149.t1;Parent=g13149.t1 NODE_239_length_29886_cov_41.589 . three_prime_UTR 9083 9413 . - . ID=g13149.t1.utr3p1;Parent=g13149.t1 #PROT g13149.t1 g13149 MSTIAADIGVVASAPIVDGNVAADDEIIATLADAHQGITANALSEKENAVSEKDDRKRPLSPSTSALAGDGEPPAKKQRIPKRKVALLLGFNGDGYQGMQLNPGARTIENDILEAMHKGGVVSEDNKMSLGKIHFQRCARTDKGVSAAGQCISVELLAVDDIVGKMNANLPPAIRVFDAIRTTNSFNAKRLCDKRRYEYVVPTFALINPAQWPSDLSQYRVDPDTIQRMNSALGRYVGTHNFHNFTKGRPATAASSKRYILSFECGEIFIGGSDGSSSIFGKVGNASAGHSGVRGHVTADTHPATPATATATTAITTTTTTTITTTTTTTAAAATAEATTAADATPATNPFEHLPAEPSAQSLEFVVLRVVGQSFMLHQIRKMVGVAIAVTSGIVGEDVIPHSYATTKRELPKAPGLGLVLDRVYFDGYNARWATEGRLPVELDRVEDAVHRFKHERIYSNIVRTECQSMAMSAWVKSLPMHTYEEVVPNDQRRPIMPDSENEDEEDDD* # PASA_UPDATE: g13146.t1, single gene model update, valid-1, status:[pasa:asmbl_4221,status:12], valid-1 NODE_239_length_29886_cov_41.589 . gene 332 1221 . - . ID=g13146;Name=g13146.t1 NODE_239_length_29886_cov_41.589 . mRNA 332 1221 . - . ID=g13146.t1;Parent=g13146;Name=g13146.t1 NODE_239_length_29886_cov_41.589 . exon 621 1221 . - . ID=g13146.t1.exon1;Parent=g13146.t1 NODE_239_length_29886_cov_41.589 . CDS 621 1221 . - 0 ID=cds.g13146.t1;Parent=g13146.t1 NODE_239_length_29886_cov_41.589 . exon 332 486 . - . ID=g13146.t1.exon2;Parent=g13146.t1 NODE_239_length_29886_cov_41.589 . CDS 332 486 . - 2 ID=cds.g13146.t1;Parent=g13146.t1 #PROT g13146.t1 g13146 MQPRTKVHTPQKTDGCIEEGDFDLETVVCDDSDERTATASDCADSAETGPGIALPGTPSDSLSADGQPQAHAQPPLVVIARVWEPVPASVGHSVTTGSHTKSLRPCGRRIEQSADRPLDRVECPYETLHPGRYCANPGCAQCKNRWSCIGAISARYLWMRDGVRRALQHPFLSMPLLRGMSPYLLDFTPLELAIFLVYISLSIPQVFNFFGIPYELNILSTMAFAIVTIPRNNVIVYLTGISFERMVRTTG* # PASA_UPDATE: g13152.t1, single gene model update, valid-1, status:[pasa:asmbl_4227,status:12], valid-1 NODE_239_length_29886_cov_41.589 . gene 22000 29731 . + . ID=g13152;Name=g13152.t1 NODE_239_length_29886_cov_41.589 . mRNA 22000 29731 . + . ID=g13152.t1;Parent=g13152;Name=g13152.t1 NODE_239_length_29886_cov_41.589 . five_prime_UTR 22000 22136 . + . ID=g13152.t1.utr5p1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 22000 22139 . + . ID=g13152.t1.exon1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 22137 22139 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 22257 22308 . + . ID=g13152.t1.exon2;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 22257 22308 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 22439 22533 . + . ID=g13152.t1.exon3;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 22439 22533 . + 2 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 22882 23076 . + . ID=g13152.t1.exon4;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 22882 23076 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 23420 23577 . + . ID=g13152.t1.exon5;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 23420 23577 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 24074 24193 . + . ID=g13152.t1.exon6;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 24074 24193 . + 1 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 24525 24622 . + . ID=g13152.t1.exon7;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 24525 24622 . + 1 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 25115 25184 . + . ID=g13152.t1.exon8;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 25115 25184 . + 2 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 25371 25525 . + . ID=g13152.t1.exon9;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 25371 25525 . + 1 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 25764 25978 . + . ID=g13152.t1.exon10;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 25764 25978 . + 2 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 26199 26372 . + . ID=g13152.t1.exon11;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 26199 26372 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 26698 26815 . + . ID=g13152.t1.exon12;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 26698 26815 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 27102 27244 . + . ID=g13152.t1.exon13;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 27102 27244 . + 2 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 27755 27814 . + . ID=g13152.t1.exon14;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 27755 27814 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 28389 28490 . + . ID=g13152.t1.exon15;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 28389 28490 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 28767 28967 . + . ID=g13152.t1.exon16;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 28767 28967 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 29244 29394 . + . ID=g13152.t1.exon17;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 29244 29394 . + 0 ID=cds.g13152.t1;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . exon 29691 29731 . + . ID=g13152.t1.exon18;Parent=g13152.t1 NODE_239_length_29886_cov_41.589 . CDS 29691 29731 . + 2 ID=cds.g13152.t1;Parent=g13152.t1 #PROT g13152.t1 g13152 MSATSENVKVAVRCRPFNGREKERSAVCSVRIDGKSTTLVNPDATDKQQKEHTFTFDHSYFWDTEQSRVYGDLGAPLLKKALEGYNATIFAYGQTGSGKTYNMTGMPDSPGIIPLMNKELFDIIGAAPPNMRYLVTVSYLEIYNEKIYDLLNPSERELKVRQHPQLGIYVDGIAELVVKSHEDIQTLQEQGNKVRTVASTNMNLVSSRSHSIFTMKIEQKDMNNLSNQGLNAKVNLVDLAGSERADSTGATGERLKEGAAINKSLSALGNVINALADPKKRSGHVPYRDSKLTRILQESLGGNTLTVMLAAISPADINFDETLSTLQYANRAKNIQNTQRKNEDENTRIIRELREEIMRLRDSLTSNSGGGMMPSGASTEQEVLKMESMIKDLEVAKRQTWEEKEKLSMMYEDERRKNLANKGILEWVMESLRKENKELHARVKEMQEEKDNLMNEYRDLKARADKMKDELQAVIKEYTQLSEAGKGESAEAKQKVTSIHTLKEQLKLANERLKAIKARIKDITDKQKQEKESSQAANMFLNEDSEIRKLIQEDERKKLEAKNAEVLKEERQRLVSEIQKDKEELQKRLGSSAKTEDLMKLEVALVEERAEKKILESRVEVLQQEKARLASDLEDAFTRQQAELEIQMLQHFQTFRHYRQYFEDQKRAIESKYRGLLEEAIQDAILLSSRNSQLNAENEEYRAELIAVKEKLGVQR* # PASA_UPDATE: g13147.t1, single gene model update, valid-1, status:[pasa:asmbl_4222,status:12], valid-1 NODE_239_length_29886_cov_41.589 . gene 2570 4284 . + . ID=g13147;Name=g13147.t1 NODE_239_length_29886_cov_41.589 . mRNA 2570 4284 . + . ID=g13147.t1;Parent=g13147;Name=g13147.t1 NODE_239_length_29886_cov_41.589 . exon 2570 2887 . + . ID=g13147.t1.exon1;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . CDS 2570 2887 . + 0 ID=cds.g13147.t1;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . exon 3106 3210 . + . ID=g13147.t1.exon2;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . CDS 3106 3210 . + 0 ID=cds.g13147.t1;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . exon 3474 4284 . + . ID=g13147.t1.exon3;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . CDS 3474 4208 . + 0 ID=cds.g13147.t1;Parent=g13147.t1 NODE_239_length_29886_cov_41.589 . three_prime_UTR 4209 4284 . + . ID=g13147.t1.utr3p1;Parent=g13147.t1 #PROT g13147.t1 g13147 MSEEEAQWYGVLLNGISIGVDLMNLVLIQRTFTLNHFRVRRSDLPACFGGGHRASKVTPLHDPAVHVTLHHTNSNGPRPSIGGHVTFPENYLAAVLWLLLASVILWLVGVFDDTLAGSTTTFDGKEELAAFVCHANYGFSETLYTTALFITMYRVIRPRTMWIAIGWVAVSLGHLISFASYIVSTMSESEQFADEVSYDDGDHVWISTLVYLSVLDALFAFFLIVDYLKHFHGEVEGFRNKLSAVFSSEYAFLGVECGISIFYIVLEALEASTGQAAFDNAGNVVVGLRHYLAMCFISYLVNEVPPMPEHLVTHRAGNGSLMGAKAGLGASRSIMCLRDPGHCGGDHDHDRLSVSSGKGDGLSSSSRGHEMMPSIRDAETVDVEV* # PASA_UPDATE: g13148.t1, single gene model update, valid-1, status:[pasa:asmbl_4226,status:3], valid-1 NODE_239_length_29886_cov_41.589 . gene 4812 8789 . + . ID=g13148;Name=g13148.t1 NODE_239_length_29886_cov_41.589 . mRNA 4812 8789 . + . ID=g13148.t1;Parent=g13148;Name=g13148.t1 NODE_239_length_29886_cov_41.589 . five_prime_UTR 4812 4884 . + . ID=g13148.t1.utr5p1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . five_prime_UTR 5029 5037 . + . ID=g13148.t1.utr5p2;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 4812 4884 . + . ID=g13148.t1.exon1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 5029 5067 . + . ID=g13148.t1.exon2;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 5038 5067 . + 0 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 5397 5511 . + . ID=g13148.t1.exon3;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 5397 5511 . + 0 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 5762 5875 . + . ID=g13148.t1.exon4;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 5762 5875 . + 2 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 6346 6427 . + . ID=g13148.t1.exon5;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 6346 6427 . + 2 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 6877 7322 . + . ID=g13148.t1.exon6;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 6877 7322 . + 1 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 7654 7943 . + . ID=g13148.t1.exon7;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 7654 7943 . + 2 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . exon 8324 8789 . + . ID=g13148.t1.exon8;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . CDS 8324 8479 . + 0 ID=cds.g13148.t1;Parent=g13148.t1 NODE_239_length_29886_cov_41.589 . three_prime_UTR 8480 8789 . + . ID=g13148.t1.utr3p1;Parent=g13148.t1 #PROT g13148.t1 g13148 MSYAQVRRVLGESNRELELNGYVGFDSLPDQLVNHRNKDGYEFNILCVGETGLGKSTLMDSLFKTDFESDESDHWRPKVGVKAATFDLEEKGVRLRLTIVDSIGFGDQINREDTCKPIVDYVNGKFEEYLQEELKAVRNSKEIADQRIHACLYFIAPTGHSLKSLDLVAMRALADKVNVIPVIAKSDCITAADLADYKKSILEEIEDNHIPIYRFPEDDDEVADLNAKLNAFIPFAVVGSRKEIKMGGQSVRVRQYPWGIVEVENENHSDFVRLREMLLRTNMEDLINTTQEKHYETFRMRRLSEMGYLDKGNQSIQEAFEKKRAEHTSELSRREDEIRQMFMRRVKEKESELKNAEADIIARFEKMRGELNAKKNELEERNRQLIAQIEQWRVQTSSPQSKKKKDKKST* # ORIGINAL: g13151.t1 original gene structure, not modified by PASA NODE_239_length_29886_cov_41.589 AUGUSTUS gene 18584 21148 . + . ID=g13151;Name=g13151.t1 NODE_239_length_29886_cov_41.589 AUGUSTUS mRNA 18584 21148 . + . ID=g13151.t1;Parent=g13151;Name=g13151.t1 NODE_239_length_29886_cov_41.589 AUGUSTUS exon 18584 18785 . + . ID=g13151.t1.exon1;Parent=g13151.t1 NODE_239_length_29886_cov_41.589 AUGUSTUS CDS 18584 18785 . + 0 ID=cds.g13151.t1;Parent=g13151.t1 NODE_239_length_29886_cov_41.589 AUGUSTUS exon 19044 21148 . + . ID=g13151.t1.exon2;Parent=g13151.t1 NODE_239_length_29886_cov_41.589 AUGUSTUS CDS 19044 21148 . + 2 ID=cds.g13151.t1;Parent=g13151.t1 #PROT g13151.t1 g13151 MLSGQQVALQPAGIPTMASISSETSSALAAHVAAQAWRPNASAVVPPLKAAKVAAARKPKAPKANAEGDAPAQKKQRSVAPKKKMPISSDASTGILAPVPIVAAGASPITKGGRKPKQLVSKNAAGAVPLLPAPQKGFTVPAPLSRQQSGQTGPSVDSLTQAQQQQLQQQTQAQVIPMMMNGQIVHVMSSMGAGGGASQGPHSVLMHGGQQMPIHVGMPQMIPVSQQNGQQPVQYLISVLAQQPQQLSAGPGNSASNNSNNNTNNNNNNNNNSSNNGGGNINSNGKNGQMQMHHQQQQQQQQQSFAMFIPQQSPIPTPTQQSSANPLLLLAEASQHTATSSPVPVTMHQAPASAFMSGANTPVPSTPWAMSARNSTVSTPITSPSHVWHSQSTQHFFPPSQPSGTKMEGGAADAFAQALHQQQQQQHQQQQQQQQQQQQQQQQMLQIQMGQMLPMGMHVYPVMAQPIAMQGQQQQQQQQQQQQQQQGQDVSHAHRPVPPKQPARRGKRATKDGVSMAPGVQQHLAPSSASPIIAPAGMHPSAQQQHHHQQQQQQQSTASSASAGASSVVSAIASPTAATPTAVNSADAAKRKINSILNARTREDLLKLSTKELNAFAAANGLTMLEMTELKTQRRRVKNRQAAQACRKKKKRLVTEMELRYEELKREGDKMHVQIGATDAEREAMERTREDLRAQRDKLAIELDALRKSSSQEQEQEQEQEQDGIDPNADNEADSGESGRSSSLQMQPSTEQSCAVSVVGEEGSNADR* # ORIGINAL: g5717.t1 original gene structure, not modified by PASA NODE_6605_length_537_cov_41.5671 AUGUSTUS gene 1 513 . - . ID=g5717;Name=g5717.t1 NODE_6605_length_537_cov_41.5671 AUGUSTUS mRNA 1 513 . - . ID=g5717.t1;Parent=g5717;Name=g5717.t1 NODE_6605_length_537_cov_41.5671 AUGUSTUS exon 1 513 . - . ID=g5717.t1.exon1;Parent=g5717.t1 NODE_6605_length_537_cov_41.5671 AUGUSTUS CDS 1 513 . - 0 ID=cds.g5717.t1;Parent=g5717.t1 #PROT g5717.t1 g5717 MLSKQMMQSMDTRFSDLLTSGVVNSFEAPLPILTAAQVYPNDKNSSRPHVISFSPLSGEIAGIGGGNNTEGITAYFSTQYMGTVVNNGIPTNADQCVTNMDNLGFIVGMESAAFEITVADAIDSVCQSLVDSKMEVASYIGGNVCGDLLSFLEYKTTGSQLCNSLITSGIL # PASA_UPDATE: g13097.t1, single gene model update, valid-1, status:[pasa:asmbl_2553,status:3], valid-1 NODE_1761_length_9343_cov_44.7025 . gene 5618 7211 . - . ID=g13097;Name=g13097.t1 NODE_1761_length_9343_cov_44.7025 . mRNA 5618 7211 . - . ID=g13097.t1;Parent=g13097;Name=g13097.t1 NODE_1761_length_9343_cov_44.7025 . five_prime_UTR 7110 7211 . - . ID=g13097.t1.utr5p1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 7079 7211 . - . ID=g13097.t1.exon1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 7079 7109 . - 0 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 6874 6922 . - . ID=g13097.t1.exon2;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 6874 6922 . - 2 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 6726 6754 . - . ID=g13097.t1.exon3;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 6726 6754 . - 1 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 6528 6612 . - . ID=g13097.t1.exon4;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 6528 6612 . - 2 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 6257 6399 . - . ID=g13097.t1.exon5;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 6257 6399 . - 1 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . exon 5618 6138 . - . ID=g13097.t1.exon6;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . CDS 5912 6138 . - 2 ID=cds.g13097.t1;Parent=g13097.t1 NODE_1761_length_9343_cov_44.7025 . three_prime_UTR 5618 5911 . - . ID=g13097.t1.utr3p1;Parent=g13097.t1 #PROT g13097.t1 g13097 MTEYKLVVVGGGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDEETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVYAITSKGSFEEIDVFREQILRVKDADQVPMMLVGNKCDLEDDRHVSKTEGQEKAKHFSIPFLETSAKTRTNVEDAFYTLVREIRRFKKRSAEDATPKRKSKKCSVL* # PASA_UPDATE: g13098.t1, single gene model update, valid-1, status:[pasa:asmbl_2554,status:12], valid-1 NODE_1761_length_9343_cov_44.7025 . gene 7618 8430 . - . ID=g13098;Name=g13098.t1 NODE_1761_length_9343_cov_44.7025 . mRNA 7618 8430 . - . ID=g13098.t1;Parent=g13098;Name=g13098.t1 NODE_1761_length_9343_cov_44.7025 . five_prime_UTR 8366 8430 . - . ID=g13098.t1.utr5p1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . exon 8323 8430 . - . ID=g13098.t1.exon1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . CDS 8323 8365 . - 0 ID=cds.g13098.t1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . exon 8194 8219 . - . ID=g13098.t1.exon2;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . CDS 8194 8219 . - 2 ID=cds.g13098.t1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . exon 8062 8116 . - . ID=g13098.t1.exon3;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . CDS 8062 8116 . - 0 ID=cds.g13098.t1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . exon 7618 7967 . - . ID=g13098.t1.exon4;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . CDS 7837 7967 . - 2 ID=cds.g13098.t1;Parent=g13098.t1 NODE_1761_length_9343_cov_44.7025 . three_prime_UTR 7618 7836 . - . ID=g13098.t1.utr3p1;Parent=g13098.t1 #PROT g13098.t1 g13098 MADRRVKIVGAIGAFANWMIPLAAIASFKDDPARINPGMTGALAVYSAFFMRWSLAIRPPNYALFACHVANEAAQLFQLGRYTV* # PASA_UPDATE: g13096.t1, single gene model update, valid-1, status:[pasa:asmbl_2555,status:12], valid-1 NODE_1761_length_9343_cov_44.7025 . gene 3445 5632 . + . ID=g13096;Name=g13096.t1 NODE_1761_length_9343_cov_44.7025 . mRNA 3445 5632 . + . ID=g13096.t1;Parent=g13096;Name=g13096.t1 NODE_1761_length_9343_cov_44.7025 . five_prime_UTR 3445 3466 . + . ID=g13096.t1.utr5p1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 3445 3565 . + . ID=g13096.t1.exon1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 3467 3565 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 3643 3685 . + . ID=g13096.t1.exon2;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 3643 3685 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 3765 3832 . + . ID=g13096.t1.exon3;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 3765 3832 . + 2 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 3949 4091 . + . ID=g13096.t1.exon4;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 3949 4091 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 4172 4325 . + . ID=g13096.t1.exon5;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 4172 4325 . + 1 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 4422 4646 . + . ID=g13096.t1.exon6;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 4422 4646 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 4726 4777 . + . ID=g13096.t1.exon7;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 4726 4777 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 4884 5008 . + . ID=g13096.t1.exon8;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 4884 5008 . + 2 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 5089 5318 . + . ID=g13096.t1.exon9;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 5089 5318 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 5411 5456 . + . ID=g13096.t1.exon10;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 5411 5456 . + 1 ID=cds.g13096.t1;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . exon 5543 5632 . + . ID=g13096.t1.exon11;Parent=g13096.t1 NODE_1761_length_9343_cov_44.7025 . CDS 5543 5632 . + 0 ID=cds.g13096.t1;Parent=g13096.t1 #PROT g13096.t1 g13096 MDRLGGVQVTCILEGRHVATLHVPMDASLLWLTDALELHVGQPVSFEYIDNEGDHIVVCNDEDMREMFGLYAWLEQKSPSRRIEPLQLVLRTSSRSRAPSRNAPSLTIDVVSEVHLDRGAYAAPAAHLTDGNFAVRYEDLRNIGIIGHGHGGTVQKALHMPTGRMIAVKSVPLDLTPDAQRQIMKELEVMERCHCEYIVAFHGAFFCDSHFLLAMELMDIGSLEYVASVVRRIPEPVLGKLVVAVVSGLVYLYERLKIVHRDVKPSNMLLNSAGQFKLCDFGVSGELVDSIAKTFVGTNAYMAPERVLGGAYSVRSDVWSLGVALVELATGGFPFRAGRLSAESNVPTAFELLECIVTEPPPALSTDEYSEALVQFVAECLTKDHETRPTPVLLQQHTFYRHYEERRVDVPQWIHSIVQVVPKP* # ORIGINAL: g13094.t1 original gene structure, not modified by PASA NODE_1761_length_9343_cov_44.7025 AUGUSTUS gene 100 766 . - . ID=g13094;Name=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS mRNA 100 766 . - . ID=g13094.t1;Parent=g13094;Name=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 628 766 . - . ID=g13094.t1.exon1;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 628 766 . - 0 ID=cds.g13094.t1;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 496 512 . - . ID=g13094.t1.exon2;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 496 512 . - 2 ID=cds.g13094.t1;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 339 351 . - . ID=g13094.t1.exon3;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 339 351 . - 0 ID=cds.g13094.t1;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 100 177 . - . ID=g13094.t1.exon4;Parent=g13094.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 100 177 . - 2 ID=cds.g13094.t1;Parent=g13094.t1 #PROT g13094.t1 g13094 MAAPAAASVPKYLRFLSPWVGNEVLFRNKLAQKLEAAVPLFKHFNNVTNTAPAWKWVLSIVPIYQAIKGNPPVEKLDLKQSS # ORIGINAL: g13095.t1 original gene structure, not modified by PASA NODE_1761_length_9343_cov_44.7025 AUGUSTUS gene 937 3158 . - . ID=g13095;Name=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS mRNA 937 3158 . - . ID=g13095.t1;Parent=g13095;Name=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 2625 3158 . - . ID=g13095.t1.exon1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 2625 3158 . - 0 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 2356 2437 . - . ID=g13095.t1.exon2;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 2356 2437 . - 0 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 2074 2195 . - . ID=g13095.t1.exon3;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 2074 2195 . - 2 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 1743 1965 . - . ID=g13095.t1.exon4;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 1743 1965 . - 0 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 1552 1620 . - . ID=g13095.t1.exon5;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 1552 1620 . - 2 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 1309 1460 . - . ID=g13095.t1.exon6;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 1309 1460 . - 2 ID=cds.g13095.t1;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS exon 937 1215 . - . ID=g13095.t1.exon7;Parent=g13095.t1 NODE_1761_length_9343_cov_44.7025 AUGUSTUS CDS 937 1215 . - 0 ID=cds.g13095.t1;Parent=g13095.t1 #PROT g13095.t1 g13095 MMDIFVKLPNGRVRPLTVRATDKLSSVTSHLESNEGLEAAKIRLSYEGKPLDQQKTFTEYGIVRETMIQSTIVSPRMLEIAVKGPDGRTESFSTRSSETLASFIGDVSHRFGVAATSALLRERSYGRALPLGPSTLDSWGIETESILDLEVKVDKGKAADAAGGSDSGPTALDKAREEVRTIPTFFTGVTLRPHHLPDFVRNSNSGDYCDYSTKTVIRLMDLSSDPEVICKFIESVPSSGGGDSPENYEYAMRRARSMSWTESAAKALVIIGDDVPHPPSYTNLNIDWNEEIDALAASNIKVYGVRAMNNASAQPFYEEIAARTGAINIDFRDFRVITDMFLAVCYKEAGEAHLAAFEMEARDQGRLEGELTAVLATLRDGADKCKESCEGEKKSSPDYAARNVPGDWWCRAQDRGVCQFHCTDAESDTWTPCPGHEQRSAPTAPTTAPASFMHTVSLAGDAPKKRMSFRRLSLKLEARRRSCIVS* # ORIGINAL: g11852.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 7156 8738 . - . ID=g11852;Name=g11852.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 7156 8738 . - . ID=g11852.t1;Parent=g11852;Name=g11852.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 7477 8738 . - . ID=g11852.t1.exon1;Parent=g11852.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 7477 8738 . - 0 ID=cds.g11852.t1;Parent=g11852.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 7156 7249 . - . ID=g11852.t1.exon2;Parent=g11852.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 7156 7249 . - 1 ID=cds.g11852.t1;Parent=g11852.t1 #PROT g11852.t1 g11852 MPADNVWTSPGGYTKGYTFADSNAIAAGVGGRLVTAVELESMRLLGFELCCCGFIADGRMVIPMQTAKAGCAPAGLNAVNVNSGDKYSAYIVADPAQAASNSKLTATKFMVPYSSGFCNPKLLTISGFTGKIVRPFVYNPSPNSESTWPFLFATNVQFVLVFNDGGSGGTDWAVYAPIPPPGYAPLSHYFTFQTVDSPPTTTQVVFVATDMPDEFKSQFGTRFAGKSVAVPPENYSQAWVSAGQGFHYAASLWEPRHSDKDYVFLGTAGSVESTYNVSYNPPLAANMLYGVHKDFLSLLFSKIEATTTATENLQMMTNDGVYSFYSSDYNTFRVQAYNKYASVALGYDINYFWSKFRNDKYDVVPLARRFKCCMNDGVSKPQCGDWFGSTGQCDTFMNSFCNSNPTDPSCGCLKSEIDLPSNPNGNANGNTNNTNNTNGNTNRNTNPINHH* # ORIGINAL: g11850.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 4888 6086 . + . ID=g11850;Name=g11850.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 4888 6086 . + . ID=g11850.t1;Parent=g11850;Name=g11850.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 4888 5250 . + . ID=g11850.t1.exon1;Parent=g11850.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 4888 5250 . + 0 ID=cds.g11850.t1;Parent=g11850.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 5322 6086 . + . ID=g11850.t1.exon2;Parent=g11850.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 5322 6086 . + 0 ID=cds.g11850.t1;Parent=g11850.t1 #PROT g11850.t1 g11850 MVQRKVLLVIQSIIVNPRFSTQTKEKLITKKDLFGSTCVITEDSPLVKKLLRGGITKIMNEEIKQTSLRSLNTMNDTKKARIYIDKLDDANEAGGRNSHKCSLILTEGDSAKALVVSGLSAIKNNKEIQNLLTILGLRFDKPDISRSQLRYGKILIMTDRDVDGSHIKGLLVNLIHAFWPNLLKEKFIGEIRSPLIKARHGQTTLEFYTLSEYTEWAKTVSKLHLWKIKYYKGLGTSSAAEGKEIFANLQKNEGIYSHGVLEDGTDDVQATNKVIDLVFKKENTHLRKEWLKTYDPTANLDMLQMSSITFTDFINLEMIQFSVEDNVRSIPSVIDGLKPSQRKVAFVMQTVMKPGQEERVAAIAGKVTTDAAYHQ* # ORIGINAL: g11849.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 4361 4807 . + . ID=g11849;Name=g11849.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 4361 4807 . + . ID=g11849.t1;Parent=g11849;Name=g11849.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 4361 4807 . + . ID=g11849.t1.exon1;Parent=g11849.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 4361 4807 . + 0 ID=cds.g11849.t1;Parent=g11849.t1 #PROT g11849.t1 g11849 MFTRNDPVITKVRKTTKEFTKITFTPDYARFNLPSLNDDHYEVIRRRVYDISACTNSKLKVYFNDQLIPVNTFKKFTDLVARVNAADGTALCLPPTTGRTRRSPTKGQRETKSGGKLASCTAPTKTNSDAYHSSTACARATAAPTSTT* # ORIGINAL: g11847.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 2 585 . + . ID=g11847;Name=g11847.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 2 585 . + . ID=g11847.t1;Parent=g11847;Name=g11847.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 2 188 . + . ID=g11847.t1.exon1;Parent=g11847.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 2 188 . + 0 ID=cds.g11847.t1;Parent=g11847.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 416 585 . + . ID=g11847.t1.exon2;Parent=g11847.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 416 585 . + 2 ID=cds.g11847.t1;Parent=g11847.t1 #PROT g11847.t1 g11847 AQRSAAVRRATVVEAPTYVKGDMVMVRARSGERKNKVAARWSGPPVDEYVEPDKYKVQTGRRGREFTYALGSPLRGWFAYYGSVGRNTTTSLSSEEMDVWLARAGGLASTTSQMRYQC* # ORIGINAL: g11855.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 15101 15754 . + . ID=g11855;Name=g11855.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 15101 15754 . + . ID=g11855.t1;Parent=g11855;Name=g11855.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 15101 15754 . + . ID=g11855.t1.exon1;Parent=g11855.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 15101 15754 . + 0 ID=cds.g11855.t1;Parent=g11855.t1 #PROT g11855.t1 g11855 MNEGDTSEGAAQKELEALRKELAERDKTIAALRKQIHLTIFLVIYGGNDDVAKLCDEATTYDAYHTTYAAIPHVVMPVSADGDFNVDDIKRLCPSDVLKAVVVAGRLSLLERKSSGTWASHIGSITDGKGAPIIFGMRRPYNEFVETEFVDYFKRHPATVLSPVFCENRLHVDGLIAEALLNASNKDGVKKAGARYLLRLEFTLRQYQTCGFESLQS* # ORIGINAL: g11851.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 6115 6875 . + . ID=g11851;Name=g11851.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 6115 6875 . + . ID=g11851.t1;Parent=g11851;Name=g11851.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 6115 6215 . + . ID=g11851.t1.exon1;Parent=g11851.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 6115 6215 . + 0 ID=cds.g11851.t1;Parent=g11851.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 6320 6875 . + . ID=g11851.t1.exon2;Parent=g11851.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 6320 6875 . + 1 ID=cds.g11851.t1;Parent=g11851.t1 #PROT g11851.t1 g11851 MAQNYIGCGNNINFLNPEGQFGTRHDGGIAAAPSGRWQAGRAKVLRARGSTCADQLALNTRFVGELKTTDTGLVYLSIPREFVDVAYEAFVTECDETVHRNATAVPYFESWNGLEPIGAHVTVASAREAVDIDMWQEHVGKTFDLRLTKPAKITTSPMWDVVWIYEVDCPQLCQLRKTMGMSPWVNFDHEFHFSFACNERGSGAMPGESKQDRQCTIQ* # ORIGINAL: g11848.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 3916 4317 . + . ID=g11848;Name=g11848.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 3916 4317 . + . ID=g11848.t1;Parent=g11848;Name=g11848.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 3916 4317 . + . ID=g11848.t1.exon1;Parent=g11848.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 3916 4317 . + 0 ID=cds.g11848.t1;Parent=g11848.t1 #PROT g11848.t1 g11848 MYIGNTNIEPFDTFILNAGGTALNHVTLGISKALINIINEVIINAYDAAQLYPVTEIRLTVNKETGQISCFNNGKGLEIAIHDAAKCYVPEMLFGRLLSTSNGDDSIEKTVAGQNGVQHHVHTVHCGNMRHYG* # ORIGINAL: g11854.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 11971 12465 . + . ID=g11854;Name=g11854.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 11971 12465 . + . ID=g11854.t1;Parent=g11854;Name=g11854.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 11971 12465 . + . ID=g11854.t1.exon1;Parent=g11854.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 11971 12465 . + 0 ID=cds.g11854.t1;Parent=g11854.t1 #PROT g11854.t1 g11854 MDPEIATQTWESLAEMYMKLKKAHQENIEKVARAQTLLADMDVATASMSAEAARQSQQSQQSRQPTSTVVTCGTCRTEMPRRSLRYHMQTHTSAKYTCRLKICKCAFLFNSEPSRSKHELHVFAKLHAAGRTGLSEPLVKLKEKHGRTFHAFILRVLASSSDTD* # ORIGINAL: g11853.t1 original gene structure, not modified by PASA NODE_776_length_17802_cov_59.3457 AUGUSTUS gene 9213 11306 . - . ID=g11853;Name=g11853.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS mRNA 9213 11306 . - . ID=g11853.t1;Parent=g11853;Name=g11853.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS exon 9213 11306 . - . ID=g11853.t1.exon1;Parent=g11853.t1 NODE_776_length_17802_cov_59.3457 AUGUSTUS CDS 9213 11306 . - 0 ID=cds.g11853.t1;Parent=g11853.t1 #PROT g11853.t1 g11853 MITETTVNVWNNRLKDVLLTGEEIKTAMNHVKEFVIAHARLFASASVGVFICFVRRAIALALRKLAVVRLKPCLKPAVVVPSALITIEPTLSLMQSLVNYIKTHPNDCTVRESNETSVKVINLEESCVTSVWDSIKVRFGRCEIRIVTPLHMTFKRQKQHDAILDHFSPIELNAPNIGRLTDILPDSAIKTFIKTTVDKFTNESREYKVQIPGIAHDRFEYDNSLKITKSTCGEVAHAYMYKKNFPNIDIHVCHYEYAMLQTFMRKYDIGITNFCSNYTLFNHTICISDEDQKAMLTEAKRDCYVQSDIKTALGKLQIEYPSVSDEEVKMYKNNFHTKEEIKKNTVKKVCIQVEVESVAGLSAGVSAGVSAGLSETELSAEFDKLLVQLSYNNIETGSIKIYNIRIDRKENKIEVPNPAYKALANEKMKRRHYSPPLPQVILKTEVTKQVLVELINEKRKPLNTLYMRKGDMFKLKSCLESFANHKELMAKLGLQHKLGILLYGEPGTGKSSAILAVATHLKKDVYYVHLNGVQTNDELQMIFDHVNKQCLNGGIIIFEDIDAMTTVVHSRTKPEQSMSLVDIVSQQTKELTLEYFLNVLQGSLTVDGTIFIATTNHLDRLDPAFYRDGRFDVRIELKKCDSYQIATIYNALMKRPIPPKLLERIAEDKYTPANLIFHIKPYMFGDYSDEEILTPFL* # PASA_UPDATE: g6435.t1, single gene model update, valid-1, status:[pasa:asmbl_4560,status:3], valid-1 NODE_2561_length_5865_cov_39.4618 . gene 128 4534 . + . ID=g6435;Name=g6435.t1 NODE_2561_length_5865_cov_39.4618 . mRNA 128 4534 . + . ID=g6435.t1;Parent=g6435;Name=g6435.t1 NODE_2561_length_5865_cov_39.4618 . five_prime_UTR 128 401 . + . ID=g6435.t1.utr5p1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 128 476 . + . ID=g6435.t1.exon1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 402 476 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 583 626 . + . ID=g6435.t1.exon2;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 583 626 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 850 1678 . + . ID=g6435.t1.exon3;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 850 1678 . + 1 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 1939 2183 . + . ID=g6435.t1.exon4;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 1939 2183 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 2539 2701 . + . ID=g6435.t1.exon5;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 2539 2701 . + 1 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 2935 3459 . + . ID=g6435.t1.exon6;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 2935 3459 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 3804 3893 . + . ID=g6435.t1.exon7;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 3804 3893 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . exon 4097 4534 . + . ID=g6435.t1.exon8;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . CDS 4097 4219 . + 0 ID=cds.g6435.t1;Parent=g6435.t1 NODE_2561_length_5865_cov_39.4618 . three_prime_UTR 4220 4534 . + . ID=g6435.t1.utr3p1;Parent=g6435.t1 #PROT g6435.t1 g6435 MMVEAEEDEAAGFGDALRPTTPVPQAATDYVQLETQKTDGRTRTASTLRTVGASLPTPRQSESDAQSSIDEGGIIVDDVGATESLNVEDFSRWVTCLCVVAFDIELGQAMEYMYPPGRLSDAETAAVCYLSFPDSNAGMVGDSVFSFRVKAGAENHPHSRGSLASSSSPVLSGNEAGALAVPASSVSMGSNGGSPSTRPSTASVSSATSAPSLQSTLSKAMMNTPSPVQGDVYYGYVFFRQVRDANLKRGYFQKSLVLLSPHPFVGLFSRIVRLIAPEFFDNGRPLLEAACRNISRWPSPAPGNTFELPILGHVLQVRVPAPHEKADFWNDSIDERDGVVGGQRRIHASLLEIDAFSCFRGVIGELYALWELVLTAEPLIVMAATPTCCSDTVLALISLISPLSYSCDYRPYFTIHDSDFKEFTSKTKPAPHAILGVTNPFFTKAFQHWPHMLKVGAAPKSSSPLSPNGDAGLVRRRRSDWKPILASDYRPFLDRDKVFLKRLISMPNRNPDGSVASVGVASPQNVSLRRHFAELTNAFMAPLERYFSSLMPLQKKVMAWRNPPRLKSFNKDEFLRAVEAHGPHVTGGRKGDWVGLYRKFIASPNFIVWYRARQSEANDRLRSIYLELLCQADVGTWMRGKAEIEVVDLLLRLREELTNPKSRRVMTPKMADALGGHIDTIVSNLPEDLRNSLQVTM* # ORIGINAL: g6436.t1 original gene structure, not modified by PASA NODE_2561_length_5865_cov_39.4618 AUGUSTUS gene 5210 5865 . - . ID=g6436;Name=g6436.t1 NODE_2561_length_5865_cov_39.4618 AUGUSTUS mRNA 5210 5865 . - . ID=g6436.t1;Parent=g6436;Name=g6436.t1 NODE_2561_length_5865_cov_39.4618 AUGUSTUS exon 5630 5865 . - . ID=g6436.t1.exon1;Parent=g6436.t1 NODE_2561_length_5865_cov_39.4618 AUGUSTUS CDS 5630 5865 . - 0 ID=cds.g6436.t1;Parent=g6436.t1 NODE_2561_length_5865_cov_39.4618 AUGUSTUS exon 5210 5288 . - . ID=g6436.t1.exon2;Parent=g6436.t1 NODE_2561_length_5865_cov_39.4618 AUGUSTUS CDS 5210 5288 . - 1 ID=cds.g6436.t1;Parent=g6436.t1 #PROT g6436.t1 g6436 PTHTNRIHHCDTCCICAASIARRLYLSQGLGVGALRRKYGGRKNNGTAPSHFKVGSGSVARACLHQLEKIKVVEKFTEGGRRVSQEGRRDLDRIAGQVAAAIRA* # ORIGINAL: g9062.t1 original gene structure, not modified by PASA NODE_1992_length_8180_cov_42.7339 AUGUSTUS gene 117 563 . + . ID=g9062;Name=g9062.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS mRNA 117 563 . + . ID=g9062.t1;Parent=g9062;Name=g9062.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 117 563 . + . ID=g9062.t1.exon1;Parent=g9062.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 117 563 . + 0 ID=cds.g9062.t1;Parent=g9062.t1 #PROT g9062.t1 g9062 MNVALPRKYDGVDILLMNTGLWELMGVQANMWESFWEPVLVQRFREFIEKLRNSPKIKYFVWITMPAVVPKDPERKMYMTPERVKWMNDFERRMAHEAGIDVIDLYQLSMERGQDFSDGYHFGGPLHDVLIDYIVNAICNSELVPGQR* # PASA_UPDATE: g9064.t1, single gene model update, valid-1, status:[pasa:asmbl_3174,status:3], valid-1 NODE_1992_length_8180_cov_42.7339 . gene 3951 5540 . + . ID=g9064;Name=g9064.t1 NODE_1992_length_8180_cov_42.7339 . mRNA 3951 5540 . + . ID=g9064.t1;Parent=g9064;Name=g9064.t1 NODE_1992_length_8180_cov_42.7339 . five_prime_UTR 3951 4016 . + . ID=g9064.t1.utr5p1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 3951 4101 . + . ID=g9064.t1.exon1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4017 4101 . + 0 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 4219 4304 . + . ID=g9064.t1.exon2;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4219 4304 . + 2 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 4396 4512 . + . ID=g9064.t1.exon3;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4396 4512 . + 0 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 4636 4687 . + . ID=g9064.t1.exon4;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4636 4687 . + 0 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 4818 4897 . + . ID=g9064.t1.exon5;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4818 4897 . + 2 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 4990 5091 . + . ID=g9064.t1.exon6;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 4990 5091 . + 0 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 5218 5276 . + . ID=g9064.t1.exon7;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 5218 5276 . + 0 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . exon 5422 5540 . + . ID=g9064.t1.exon8;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . CDS 5422 5512 . + 1 ID=cds.g9064.t1;Parent=g9064.t1 NODE_1992_length_8180_cov_42.7339 . three_prime_UTR 5513 5540 . + . ID=g9064.t1.utr3p1;Parent=g9064.t1 #PROT g9064.t1 g9064 MALPLGSRVVLIACGSFNPPTNMHLRMFELARNSLQKSQYQVLAGLLSPVNDLYKKKGLLPISHRANMCRAAIPKNGWLRVDEWESAQEVWQRTVEVLRRTSEVVNQEFHNGKDKVQVKLLCGADLMDTFKVPGLWAEEDLKEIINEFGIVCITRDGHDVVELLKTIPVLVGVENRVHIVTEFMPNKISSTELRSAIKRGDTIRYLTPHPVVDYIESEGLYQS* # ORIGINAL: g9063.t1 original gene structure, not modified by PASA NODE_1992_length_8180_cov_42.7339 AUGUSTUS gene 1038 3503 . - . ID=g9063;Name=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS mRNA 1038 3503 . - . ID=g9063.t1;Parent=g9063;Name=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 3409 3503 . - . ID=g9063.t1.exon1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 3409 3503 . - 0 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 3231 3309 . - . ID=g9063.t1.exon2;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 3231 3309 . - 1 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 2780 3083 . - . ID=g9063.t1.exon3;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 2780 3083 . - 0 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 2371 2609 . - . ID=g9063.t1.exon4;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 2371 2609 . - 2 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 1706 1960 . - . ID=g9063.t1.exon5;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 1706 1960 . - 0 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 1278 1435 . - . ID=g9063.t1.exon6;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 1278 1435 . - 0 ID=cds.g9063.t1;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS exon 1038 1122 . - . ID=g9063.t1.exon7;Parent=g9063.t1 NODE_1992_length_8180_cov_42.7339 AUGUSTUS CDS 1038 1122 . - 1 ID=cds.g9063.t1;Parent=g9063.t1 #PROT g9063.t1 g9063 MPNLGKWSRSKATLRAIELDAEITQGTQVQVVVEDKTPKVVKPRIDAKFHAFIARTMLSKYINGFIMITILMNAITIAAETTRDEEAKRVYDYFYWADYIFLGIYTAEAALKLYAEPRGYWRNGYNRFDFAIVIVSYIEIILGAVTAGGANLGFLKVVRALRALRALRSVSFIKSMQVLVNALLETIRSSVLDLLLLLFLGMFLFSIVGYYFFGYDSKANKASWGTVGVTFMSLFTYVTVDGWTATQDTINSYSGSIAYTIIFIFFGHFLFTNLFIGVIIQNIEHATHEYKVKQEDIKKETITKKKAYILERQRQEMKALLEKQRGGDFKSFQQMVKHLAGTLRHEDIVPMLDHACSTTWLDTFMTTLDYQENTMFRSQMLHFEIANTLAELAEHKLSGRTPVV* # ORIGINAL: g60.t1 original gene structure, not modified by PASA NODE_2249_length_7086_cov_40.3882 AUGUSTUS gene 1484 3586 . - . ID=g60;Name=g60.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS mRNA 1484 3586 . - . ID=g60.t1;Parent=g60;Name=g60.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS exon 1484 3586 . - . ID=g60.t1.exon1;Parent=g60.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS CDS 1484 3586 . - 0 ID=cds.g60.t1;Parent=g60.t1 #PROT g60.t1 g60 MARMEIWRAMVFVMSAGVISLLASIPMLVIHERNDAMGCACDCTMIDRRLRDQDALSPFPTDDDAALRKRMTQPSAPSSQQPAISTAAPTLPGHVTASDVSVEDDALSMSADNGCSTKKQTEEDRKSEFILSSKSESEIRGRDSVKLSECLSLYSRPRARTATPPYECDGSRCVSTSTAADERTSGVRQDVRDRTNADADGIGDVGGDRSTESNSRNGTDGQHNGSTADGQSEGQLEAAGCTWLSDSTRFLRYTPSQADLNATEGCTLLLSSLHKLLWVDRRIHYEIFGGTLLGAVRNGAIIPGDSDIDINVVLPPSPFRESRDDGGRVRTGERGRGGSADAPHDRDTCRHAPNLLHRRPMDWQRFWHLQTVAASLFLRLSEDMEASHPEWTLRWFFPTDSTAKLSLWKEPPDWRNVPSSAYVSTMCSADVGLFDVVTWVDTHPSDTVSREPAAAVNGTAAANSSGEESVPTTTPSEMYEQLVSSRAYCECAVGTAIARCPNGDAPRREFKDHYGDTWWLQMPDFKGFKNASNPGQGIRRDTPEHIRAVLGDLVRYDTDRDGAISLGETRRILDGIIATRRNGVSGGVLESVTHVETKKDADGSNPQSLSMVSAGAGRPAPPDDAFAAQTVGDNNKMKGGHTRLGGPEQGVVNSEEHDEQSVDTTYPDDFVRQRAAEVDSFYKYFRTLARARGIRWMRAT* # ORIGINAL: g59.t1 original gene structure, not modified by PASA NODE_2249_length_7086_cov_40.3882 AUGUSTUS gene 84 1082 . + . ID=g59;Name=g59.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS mRNA 84 1082 . + . ID=g59.t1;Parent=g59;Name=g59.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS exon 84 186 . + . ID=g59.t1.exon1;Parent=g59.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS CDS 84 186 . + 1 ID=cds.g59.t1;Parent=g59.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS exon 612 1082 . + . ID=g59.t1.exon2;Parent=g59.t1 NODE_2249_length_7086_cov_40.3882 AUGUSTUS CDS 612 1082 . + 0 ID=cds.g59.t1;Parent=g59.t1 #PROT g59.t1 g59 HLAAAEGRIEIVYWLLEQGADPLIRDRWGNLPMDDAFRHHHQHVYDLLSSEVTSRLRKRSLMDAADAALSTHTPSLAAGASATTTHARDAVTAEGSVDTHSSPSSPVGPRRKKDFQLRAPKEFRSARQAHPPGAASMMKRPENGPTRVSRAPASDGASGADAVGNDALCENDDVDGDDRDENAPLLGSAS* # PASA_UPDATE: g7632.t1, single gene model update, valid-1, status:[pasa:asmbl_8892,status:12], valid-1 NODE_692_length_18981_cov_42.5849 . gene 7927 9850 . + . ID=g7632;Name=g7632.t1 NODE_692_length_18981_cov_42.5849 . mRNA 7927 9850 . + . ID=g7632.t1;Parent=g7632;Name=g7632.t1 NODE_692_length_18981_cov_42.5849 . exon 7927 7982 . + . ID=g7632.t1.exon1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . CDS 7927 7982 . + 0 ID=cds.g7632.t1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . exon 8078 8114 . + . ID=g7632.t1.exon2;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . CDS 8078 8114 . + 1 ID=cds.g7632.t1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . exon 8462 8608 . + . ID=g7632.t1.exon3;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . CDS 8462 8608 . + 0 ID=cds.g7632.t1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . exon 8947 9129 . + . ID=g7632.t1.exon4;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . CDS 8947 9129 . + 0 ID=cds.g7632.t1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . exon 9541 9850 . + . ID=g7632.t1.exon5;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . CDS 9541 9633 . + 0 ID=cds.g7632.t1;Parent=g7632.t1 NODE_692_length_18981_cov_42.5849 . three_prime_UTR 9634 9850 . + . ID=g7632.t1.utr3p1;Parent=g7632.t1 #PROT g7632.t1 g7632 MRDPPGSMERVVALVSDFLPFSSLCFVPLNQSRMSASLQWAIIRNNSSFLVKNGKAILSREANNLTNENSFKASGLVNERTVGVAAGKDGKGVVLSIRNKGAARKPAKALRHVALKRNARRTLAAIRNETTNNHYREDLTRAALARASAILRSQQPKKAVVAKKRSHKARK* # ORIGINAL: g7636.t1 original gene structure, not modified by PASA NODE_692_length_18981_cov_42.5849 AUGUSTUS gene 16820 18956 . - . ID=g7636;Name=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS mRNA 16820 18956 . - . ID=g7636.t1;Parent=g7636;Name=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 18874 18956 . - . ID=g7636.t1.exon1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 18874 18956 . - 0 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 18562 18643 . - . ID=g7636.t1.exon2;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 18562 18643 . - 1 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 18275 18359 . - . ID=g7636.t1.exon3;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 18275 18359 . - 0 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 18021 18136 . - . ID=g7636.t1.exon4;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 18021 18136 . - 2 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 17677 17796 . - . ID=g7636.t1.exon5;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 17677 17796 . - 0 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 17333 17387 . - . ID=g7636.t1.exon6;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 17333 17387 . - 0 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 17052 17149 . - . ID=g7636.t1.exon7;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 17052 17149 . - 2 ID=cds.g7636.t1;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 16820 16879 . - . ID=g7636.t1.exon8;Parent=g7636.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 16820 16879 . - 0 ID=cds.g7636.t1;Parent=g7636.t1 #PROT g7636.t1 g7636 MIAQVTREQQDQFSANSHTKAKKAQDAGHFDAEIVSVHTITTDAEGNETPIVVSKDDGIRGVTTAKDLAKLRAAFKEGGTTTAGNSSQVSDGASAVVVARRSAAEKLGLPIIGSLCGYAVTGVPPEIMGVGPAYAIPNALKNAGLSIADIDVFEINEAFASQAIFCVKHLGIPEGKVNPNGGAIALGHPLGCTGNRQIATLLNELKRTNKRFGVVSMCIGTGMGAAAVFERE* # PASA_UPDATE: g7631.t1, single gene model update, valid-1, status:[pasa:asmbl_8889,status:3], valid-1 NODE_692_length_18981_cov_42.5849 . gene 5421 7660 . - . ID=g7631;Name=g7631.t1 NODE_692_length_18981_cov_42.5849 . mRNA 5421 7660 . - . ID=g7631.t1;Parent=g7631;Name=g7631.t1 NODE_692_length_18981_cov_42.5849 . five_prime_UTR 7539 7660 . - . ID=g7631.t1.utr5p1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . exon 7472 7660 . - . ID=g7631.t1.exon1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . CDS 7472 7538 . - 0 ID=cds.g7631.t1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . exon 7297 7342 . - . ID=g7631.t1.exon2;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . CDS 7297 7342 . - 2 ID=cds.g7631.t1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . exon 6789 7020 . - . ID=g7631.t1.exon3;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . CDS 6789 7020 . - 1 ID=cds.g7631.t1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . exon 6193 6397 . - . ID=g7631.t1.exon4;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . CDS 6193 6397 . - 0 ID=cds.g7631.t1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . exon 5421 5966 . - . ID=g7631.t1.exon5;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . CDS 5659 5966 . - 2 ID=cds.g7631.t1;Parent=g7631.t1 NODE_692_length_18981_cov_42.5849 . three_prime_UTR 5421 5658 . - . ID=g7631.t1.utr3p1;Parent=g7631.t1 #PROT g7631.t1 g7631 MAGVRAAGSMAFPFLRRCTAFAAPLPRPVTTLPLGIQWARHASTTPRLNEEWGSKKSKKTIIDAEAISVEDSAPTPSTPAGTPVSPLDQLFSITEKTADEQESKRRDGLAPVRDQYAHSIRQIRISIWKLNIVARLVRRMTVEDALKQLKFVNRSARMHVSKAIFEAAQKAKNTGLTYKDLYVDKCFVGRGKYERRRRIGARSHTGLGYLRRSHQFVVLRPTVHEKLVKAPQNAASDESTRKYLTPDGKHMWLPVAPPKKSKATKERRQKFQPINIKPRKITNVF* # ORIGINAL: g7635.t1 original gene structure, not modified by PASA NODE_692_length_18981_cov_42.5849 AUGUSTUS gene 13914 15750 . - . ID=g7635;Name=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS mRNA 13914 15750 . - . ID=g7635.t1;Parent=g7635;Name=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 15475 15750 . - . ID=g7635.t1.exon1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 15475 15750 . - 0 ID=cds.g7635.t1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 15273 15395 . - . ID=g7635.t1.exon2;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 15273 15395 . - 0 ID=cds.g7635.t1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 14991 15101 . - . ID=g7635.t1.exon3;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 14991 15101 . - 0 ID=cds.g7635.t1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 14630 14817 . - . ID=g7635.t1.exon4;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 14630 14817 . - 0 ID=cds.g7635.t1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 14152 14224 . - . ID=g7635.t1.exon5;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 14152 14224 . - 1 ID=cds.g7635.t1;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 13914 14003 . - . ID=g7635.t1.exon6;Parent=g7635.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 13914 14003 . - 0 ID=cds.g7635.t1;Parent=g7635.t1 #PROT g7635.t1 g7635 MASVQQQHPSAQHTMEHQGMKEASHLDMTALRNVVTIRHELRQRKKQKLPLDEDAFNMYAKTLSDLEIKGIYKGSMPPHSEKERRERDMVEKILDKTYFALYGLADPWLTVDATLKPTYDKLAHIMQSLLEFERTGAYTAETLRPIQVDLFDIESLTDEGKFVEKGRIPQGQNVLRTMLNRCYELAHKLLVSLEHIAPEMRHGHDRLVALKNELKAMQERGFGWSELRRVQHQLDDLEKSRKDARIETKNKRIPAGQAACALLAEECYDDIFDMMSVLESGNRMEE* # ORIGINAL: g7629.t1 original gene structure, not modified by PASA NODE_692_length_18981_cov_42.5849 AUGUSTUS gene 472 2436 . + . ID=g7629;Name=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS mRNA 472 2436 . + . ID=g7629.t1;Parent=g7629;Name=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 472 588 . + . ID=g7629.t1.exon1;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 472 588 . + 0 ID=cds.g7629.t1;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 770 881 . + . ID=g7629.t1.exon2;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 770 881 . + 0 ID=cds.g7629.t1;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 1145 1362 . + . ID=g7629.t1.exon3;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 1145 1362 . + 2 ID=cds.g7629.t1;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 1665 1876 . + . ID=g7629.t1.exon4;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 1665 1876 . + 0 ID=cds.g7629.t1;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 2076 2436 . + . ID=g7629.t1.exon5;Parent=g7629.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 2076 2436 . + 1 ID=cds.g7629.t1;Parent=g7629.t1 #PROT g7629.t1 g7629 MWGFAVLAELAETFVFLYLGVSIFPLDSTWEPWIIVIAIVGCLVGRALNVFPLAALANIGRTIKITGRMQIMMFHAGLRGAVAYALAVGVDSPNKDAIRSTTQAVVLLTVFLMGGSTAPLLSRMGLVRGRMGLKAAKTDTGRRGEAASVYSLVPEFSTEDGTERPPPASGHQQPHTQQPHAQPNPHRDVEDPHAEQSAAVRAAGGKRPWIMEKFVYLDRKYFLPFFSGLPPRTEDTAVDETPMGVRDQSASAEHVAGPSSASATASPHAGASQARQSTSVGAKPLFSRRGTAAGASDFAELDRIGGERRLSRANSDVDPLDLPTGLDDDDDVSLVNSYR* # ORIGINAL: g7634.t1 original gene structure, not modified by PASA NODE_692_length_18981_cov_42.5849 AUGUSTUS gene 12935 13559 . - . ID=g7634;Name=g7634.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS mRNA 12935 13559 . - . ID=g7634.t1;Parent=g7634;Name=g7634.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 13466 13559 . - . ID=g7634.t1.exon1;Parent=g7634.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 13466 13559 . - 0 ID=cds.g7634.t1;Parent=g7634.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 12935 13218 . - . ID=g7634.t1.exon2;Parent=g7634.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 12935 13218 . - 2 ID=cds.g7634.t1;Parent=g7634.t1 #PROT g7634.t1 g7634 MYSLTKSPSVGGAIRREVEQFANCREFIEGRDPSFACLDELVKSYTKAYTVLQPYFDNVELQKELFGIDCLREALPLGFNKPTQKPVFNPLFLDPFGDGARNLARDIATQARSQSPNVFGLVGAS* # ORIGINAL: g7633.t1 original gene structure, not modified by PASA NODE_692_length_18981_cov_42.5849 AUGUSTUS gene 11299 12300 . - . ID=g7633;Name=g7633.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS mRNA 11299 12300 . - . ID=g7633.t1;Parent=g7633;Name=g7633.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS exon 11299 12300 . - . ID=g7633.t1.exon1;Parent=g7633.t1 NODE_692_length_18981_cov_42.5849 AUGUSTUS CDS 11299 12300 . - 0 ID=cds.g7633.t1;Parent=g7633.t1 #PROT g7633.t1 g7633 MRLLMLDFADRGFIAAFADTNYSLAVICDIGRPSPINSRLTMVNTFCEASSYVMKELLTRLFSIDVPISDLEQFRGRPAFFVRNLLPKLVTSFRPGIDNVKWFEDARAIAHATSKGDVRRIVDRVAGKSAAIYSTFVGALQCAAIFAPQSGVAGISLISLAANADYYRSTNLLFAAGDTYDIATEPIVADVLRSRAYEAASERELVMRCLAARLDTEEGHVFEDILAWGMVRRVRQLRADRFLMTDYPVLLSAVLEPFLGGCKYPPVISSVTVKINQLVICAKADDPFAIAMRRPDAVCCRVSELAHSDIVFAAELDNRKAVVAIQCKAWGTR* # PASA_UPDATE: g7630.t1, single gene model update, valid-1, status:[pasa:asmbl_8891,status:12], valid-1 NODE_692_length_18981_cov_42.5849 . gene 3041 5218 . + . ID=g7630;Name=g7630.t1 NODE_692_length_18981_cov_42.5849 . mRNA 3041 5218 . + . ID=g7630.t1;Parent=g7630;Name=g7630.t1 NODE_692_length_18981_cov_42.5849 . five_prime_UTR 3041 3098 . + . ID=g7630.t1.utr5p1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . five_prime_UTR 3238 3255 . + . ID=g7630.t1.utr5p2;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . exon 3041 3098 . + . ID=g7630.t1.exon1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . exon 3238 3334 . + . ID=g7630.t1.exon2;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . CDS 3256 3334 . + 0 ID=cds.g7630.t1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . exon 3482 3911 . + . ID=g7630.t1.exon3;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . CDS 3482 3911 . + 2 ID=cds.g7630.t1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . exon 4216 4540 . + . ID=g7630.t1.exon4;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . CDS 4216 4540 . + 1 ID=cds.g7630.t1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . exon 4823 5218 . + . ID=g7630.t1.exon5;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . CDS 4823 5008 . + 0 ID=cds.g7630.t1;Parent=g7630.t1 NODE_692_length_18981_cov_42.5849 . three_prime_UTR 5009 5218 . + . ID=g7630.t1.utr3p1;Parent=g7630.t1 #PROT g7630.t1 g7630 MAFRNVLRSASAAAIRPSAARFMARASVATRSMSTTAAKPTHSSKSLWNQIGFIGLSSGVAAAAYLYFDSVKSEAKASQPNWAKLREEIADVMDDENYDDGSLGPVFVRLAWHAAGTFDPKHKIVGGSSGATMRFGPEAAHGANNGLAVARTVLETIHKRYPEVSYGDLWTLAGVVAIEKMGGPVIPWRAGRKDAADEKACPPDGRLPDASKAQDHVRAVFNRMGFNDQEIVALVGAHAIGRCHRDRSGYEGPWTFAPTTFSNEYFKQLLDNKWTERKWNGPKQYQDPTGELMMLPADMVIVQDAQFKKYAEAYAKDEALFFKDFAKAFSKLLELGVKF* # ORIGINAL: g10873.t1 original gene structure, not modified by PASA NODE_2483_length_6105_cov_37.0683 AUGUSTUS gene 3227 5322 . + . ID=g10873;Name=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS mRNA 3227 5322 . + . ID=g10873.t1;Parent=g10873;Name=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 3227 3337 . + . ID=g10873.t1.exon1;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 3227 3337 . + 0 ID=cds.g10873.t1;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 3532 3608 . + . ID=g10873.t1.exon2;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 3532 3608 . + 0 ID=cds.g10873.t1;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 3960 4107 . + . ID=g10873.t1.exon3;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 3960 4107 . + 1 ID=cds.g10873.t1;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 4318 4467 . + . ID=g10873.t1.exon4;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 4318 4467 . + 0 ID=cds.g10873.t1;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 5146 5322 . + . ID=g10873.t1.exon5;Parent=g10873.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 5146 5322 . + 0 ID=cds.g10873.t1;Parent=g10873.t1 #PROT g10873.t1 g10873 MDNVRYRQGYVLSYDRRNRTANWVVEHVSSDLLKQNNANRQESDFREDDADPPIFRAKNSDYRKSGFDRGHLAAAANHRYAQSAMDETFYLSNMSPQVGKGFNRDKWNELETYARDRVKSSKNVWICTGPLYRPYTETDGSKWIRYKVIGESNVAVPTHFFKIIVCEAHNGVLSAESYILPNVVIPDSTPISVFKVPLIEVEKASGFLFFDKIPNKYSIA* # ORIGINAL: g10872.t1 original gene structure, not modified by PASA NODE_2483_length_6105_cov_37.0683 AUGUSTUS gene 275 1471 . - . ID=g10872;Name=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS mRNA 275 1471 . - . ID=g10872.t1;Parent=g10872;Name=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 1402 1471 . - . ID=g10872.t1.exon1;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 1402 1471 . - 0 ID=cds.g10872.t1;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 1142 1242 . - . ID=g10872.t1.exon2;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 1142 1242 . - 2 ID=cds.g10872.t1;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 932 992 . - . ID=g10872.t1.exon3;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 932 992 . - 0 ID=cds.g10872.t1;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS exon 275 666 . - . ID=g10872.t1.exon4;Parent=g10872.t1 NODE_2483_length_6105_cov_37.0683 AUGUSTUS CDS 275 666 . - 2 ID=cds.g10872.t1;Parent=g10872.t1 #PROT g10872.t1 g10872 MSAQASDTELDLSVPMKGWLDVRCIDNTDDTFQHDWRRRYCMLMPTERLFYHAKDTSILNPSETKRLPSTDELIVDDDSKRPRRLSSSRPGENGSASAPDVTTHLNSNAAGMHSTVGQGQGHGDKPREMKTARSAGFFRPKRRDSASASDAPSADVVNGSAGGEAHVRSSRQRARSVTVHDMQTDTKWKQRVSAMKRTLSLSKDPDDS # ORIGINAL: g3171.t1 original gene structure, not modified by PASA NODE_2234_length_7124_cov_68.3549 AUGUSTUS gene 2348 3414 . - . ID=g3171;Name=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS mRNA 2348 3414 . - . ID=g3171.t1;Parent=g3171;Name=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 3301 3414 . - . ID=g3171.t1.exon1;Parent=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 3301 3414 . - 0 ID=cds.g3171.t1;Parent=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 2981 3067 . - . ID=g3171.t1.exon2;Parent=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 2981 3067 . - 0 ID=cds.g3171.t1;Parent=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 2348 2869 . - . ID=g3171.t1.exon3;Parent=g3171.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 2348 2869 . - 0 ID=cds.g3171.t1;Parent=g3171.t1 #PROT g3171.t1 g3171 MDKRKETAARLREKLKKKKESLADEFDFKTYMFIVHTAEKPPTVFELLSLVPVMTNDYENVIAKGVEDKKYSAASFADLLSKDTVQIHSARFRAVRSDMECRDQPMDFLFYPRKDIDRIEFRVLSRWKSMVSSERARATDDESSFREIPQLFVFNRRHYEDQCLRFLGASGDGKGLVIEDSDSSACIFVDRDRVSTNTGSAVLFRLRSVCLYLPQDRLTHWAADGVERVLAKYAEMRGPN* # ORIGINAL: g3170.t1 original gene structure, not modified by PASA NODE_2234_length_7124_cov_68.3549 AUGUSTUS gene 177 1171 . - . ID=g3170;Name=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS mRNA 177 1171 . - . ID=g3170.t1;Parent=g3170;Name=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 635 1171 . - . ID=g3170.t1.exon1;Parent=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 635 1171 . - 0 ID=cds.g3170.t1;Parent=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 460 512 . - . ID=g3170.t1.exon2;Parent=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 460 512 . - 0 ID=cds.g3170.t1;Parent=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 177 351 . - . ID=g3170.t1.exon3;Parent=g3170.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 177 351 . - 1 ID=cds.g3170.t1;Parent=g3170.t1 #PROT g3170.t1 g3170 MDADASPPRKRFKDDPSATAASDPLDFQSNSSVVLSQNACVDPSANDRSGVHIERNTAARVEEAGLSDHVGIHLDGVESEKDHGANKCTKLDDDHLASKSSVHSSDKAITDGASLISDHVGRASESTVLSDANGGVDGVGAAVDCRVPLAVISTHRQVAYVCSADYIMLVDLLPRVPGRATLVHSLIEAYSLPDLMRVIAPRKATASELEAFHSSEYVNVLSTVASADLRKGRVRKAMEEHGIDDECHPFERMYE # ORIGINAL: g3173.t1 original gene structure, not modified by PASA NODE_2234_length_7124_cov_68.3549 AUGUSTUS gene 5792 6948 . + . ID=g3173;Name=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS mRNA 5792 6948 . + . ID=g3173.t1;Parent=g3173;Name=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 5792 6011 . + . ID=g3173.t1.exon1;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 5792 6011 . + 0 ID=cds.g3173.t1;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 6161 6337 . + . ID=g3173.t1.exon2;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 6161 6337 . + 2 ID=cds.g3173.t1;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 6472 6569 . + . ID=g3173.t1.exon3;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 6472 6569 . + 2 ID=cds.g3173.t1;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 6847 6948 . + . ID=g3173.t1.exon4;Parent=g3173.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 6847 6948 . + 0 ID=cds.g3173.t1;Parent=g3173.t1 #PROT g3173.t1 g3173 MAWFNDQRTVCVLLAALCLVHRAAARIDAIDSSMKPPLGWSTWNTFRYDVSETLIKETADVFAASKLAAAGYEYVLIDDGWTDCAVYNENGGCTQQAPRDSEGRIPVDPRKFPSGMKSLSDYVHSKGLKLGIYTAVSAKTCGGFSSSLGYEAIDARTFADWGMDFIKHDTCNYDCGVHDGCMQNSTRAMRAGIDATGV* # ORIGINAL: g3172.t1 original gene structure, not modified by PASA NODE_2234_length_7124_cov_68.3549 AUGUSTUS gene 3965 4824 . + . ID=g3172;Name=g3172.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS mRNA 3965 4824 . + . ID=g3172.t1;Parent=g3172;Name=g3172.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 3965 4297 . + . ID=g3172.t1.exon1;Parent=g3172.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 3965 4297 . + 0 ID=cds.g3172.t1;Parent=g3172.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS exon 4522 4824 . + . ID=g3172.t1.exon2;Parent=g3172.t1 NODE_2234_length_7124_cov_68.3549 AUGUSTUS CDS 4522 4824 . + 0 ID=cds.g3172.t1;Parent=g3172.t1 #PROT g3172.t1 g3172 MFNRAALRMPATRNEWGCVIATTIVLFLCVRAVALSTEPQSLSSPHDGIFSQDVPLTATSAFDNLRAAGGDLSSCKRLDEVRVDYKSIEPFLIVNVTSNTGNNTWIRNSVKHRIPFAVFRGGMYVVEESVARAIISCAPIPRAHIDDIMSQLDYQAIQVLPRPFARRVVMKPVYVDEDGDADGEYKREESFNNGMGDDGAKRDAHKDENYG* # PASA_UPDATE: g852.t1, single gene model update, valid-1, status:[pasa:asmbl_7953,status:12], valid-1 NODE_5238_length_956_cov_35.3768 . gene 107 742 . - . ID=g852;Name=g852.t1 NODE_5238_length_956_cov_35.3768 . mRNA 107 742 . - . ID=g852.t1;Parent=g852;Name=g852.t1 NODE_5238_length_956_cov_35.3768 . five_prime_UTR 664 742 . - . ID=g852.t1.utr5p1;Parent=g852.t1 NODE_5238_length_956_cov_35.3768 . exon 547 742 . - . ID=g852.t1.exon1;Parent=g852.t1 NODE_5238_length_956_cov_35.3768 . CDS 547 663 . - 0 ID=cds.g852.t1;Parent=g852.t1 NODE_5238_length_956_cov_35.3768 . exon 107 330 . - . ID=g852.t1.exon2;Parent=g852.t1 NODE_5238_length_956_cov_35.3768 . CDS 107 330 . - 0 ID=cds.g852.t1;Parent=g852.t1;3_prime_partial=true #PROT g852.t1 g852 MDGKRRLEDDAGGALVVKRQRVDDALVPANAGGRQLIQSGPKRTSALMAPIMLLTGHEGEVFTCKFNPSGTALATGSFDRDVFLWHTYGECENYAVLKGHSNAVLDLHWSPDG # PASA_UPDATE: g6181.t1, single gene model update, valid-1, status:[pasa:asmbl_9806,status:12], valid-1 NODE_87_length_42081_cov_43.0188 . gene 296 4088 . - . ID=g6181;Name=g6181.t1 NODE_87_length_42081_cov_43.0188 . mRNA 296 4088 . - . ID=g6181.t1;Parent=g6181;Name=g6181.t1 NODE_87_length_42081_cov_43.0188 . five_prime_UTR 3987 4088 . - . ID=g6181.t1.utr5p1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 3973 4088 . - . ID=g6181.t1.exon1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 3973 3986 . - 0 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 3804 3847 . - . ID=g6181.t1.exon2;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 3804 3847 . - 1 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 3002 3652 . - . ID=g6181.t1.exon3;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 3002 3652 . - 2 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 2595 2692 . - . ID=g6181.t1.exon4;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 2595 2692 . - 2 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 2339 2371 . - . ID=g6181.t1.exon5;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 2339 2371 . - 0 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 2156 2204 . - . ID=g6181.t1.exon6;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 2156 2204 . - 0 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 1833 1951 . - . ID=g6181.t1.exon7;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 1833 1951 . - 2 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 1522 1609 . - . ID=g6181.t1.exon8;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 1522 1609 . - 0 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 1177 1346 . - . ID=g6181.t1.exon9;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 1177 1346 . - 2 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 622 939 . - . ID=g6181.t1.exon10;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 622 939 . - 0 ID=cds.g6181.t1;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . exon 296 382 . - . ID=g6181.t1.exon11;Parent=g6181.t1 NODE_87_length_42081_cov_43.0188 . CDS 296 382 . - 0 ID=cds.g6181.t1;Parent=g6181.t1;3_prime_partial=true #PROT g6181.t1 g6181 MANESGSGSEYESAAEDTQEAIPPKNKEPVKAASSPSAPPRTKAENTPEKSKGDPSPVKRKPQQQQQQQQQQRGKKKDRQNASKKEVGSASTLIQLDNELEAVTAPEIPPASAAGTPSLAPSPGTPETSNAPQAAQAAQVTHEPKLEAEAAVNTQGSTKTNAEVASIRTQTTPLPQVAAPTPTQTQTQTPTQTPMASVPTTAQPEASKQAPASSWGWGWGSIMSTAASTLTTVSSMTENISKYIESVEESLGVPTPKALAEKEATEGEEACTQASNQVDESRPASSGLMSVVDHGLGYLGNAILKVKENVSQQSFDEIGERWLSQGLDALEAVGKKALDVVAADINLDGSLPKESADAHQPARSQEWDRSFSGCFEKVNGNAHRDALTALAADSNIRIQQTLLTLRGTRKWAADEKISALTEVMNGDEDVATSKDLSATLSTLLAAFSEQSRTTRSNSGSSLGAGASVVSSMRSDAVTEPLCHAREGSLAAIQDQKAEMKAGLDQLCANWNGAETVGPRECAEQTRAYLEETLRGSFDDAMTRLAEFTSHGVLLQRK # ORIGINAL: g6185.t1 original gene structure, not modified by PASA NODE_87_length_42081_cov_43.0188 AUGUSTUS gene 27528 30446 . + . ID=g6185;Name=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS mRNA 27528 30446 . + . ID=g6185.t1;Parent=g6185;Name=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 27528 27752 . + . ID=g6185.t1.exon1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 27528 27752 . + 0 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 27931 28495 . + . ID=g6185.t1.exon2;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 27931 28495 . + 0 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 28711 28987 . + . ID=g6185.t1.exon3;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 28711 28987 . + 2 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 29211 29497 . + . ID=g6185.t1.exon4;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 29211 29497 . + 1 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 29685 29755 . + . ID=g6185.t1.exon5;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 29685 29755 . + 2 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 30027 30116 . + . ID=g6185.t1.exon6;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 30027 30116 . + 0 ID=cds.g6185.t1;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 30297 30446 . + . ID=g6185.t1.exon7;Parent=g6185.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 30297 30446 . + 0 ID=cds.g6185.t1;Parent=g6185.t1 #PROT g6185.t1 g6185 MSAAIAHTPARAAPPLRDTTPLGDNEVSPIDVCENRMRQFYAHIDIMASNVQAAKEVLMDLSDVMRAARMKSSGKVIDSARLSDLDSKHTKCVESARQMVNASHDFVHVLGNLKIAVDLAFSGNGTISACAATPISNSTASDDDRDKENSFANDSFRGLHPASSDAGSDNTPKMSASSPAYDLSLSSDDNNRSLTSVSDISPIAKRDFSGSEGNSVSTPDYMECSPQPATIDVKGRSNAVATPSTVFVDKRVAALGGARAAALVVDLSPTPVTPTFPSPPITVRPYGADGPINYANDDSTLSSDTSMASVGDTHNRSVFGVRKAASPPKTPLIRMPKNGILDESSESAADVNSADNTPQMDNSPTVLIKMIPSTNSFTPGANGRFDPSSVCLDTPSPVSVQSYAGRGDEIAVKPHIMAILDEMDDMAAAAANGVARAAIPAPAQNNSTVHEAEPALSVPVKAKRLDYSVFPATFQTGRGASELGSLFAVFLRKHEEGRGKKAVPMTFMEICDALGGASCDRERTSILLKMLKTRGYVAKVGGRSGDTKAYALAL* # ORIGINAL: g6187.t1 original gene structure, not modified by PASA NODE_87_length_42081_cov_43.0188 AUGUSTUS gene 38460 42010 . + . ID=g6187;Name=g6187.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS mRNA 38460 42010 . + . ID=g6187.t1;Parent=g6187;Name=g6187.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 38460 40208 . + . ID=g6187.t1.exon1;Parent=g6187.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 38460 40208 . + 0 ID=cds.g6187.t1;Parent=g6187.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 40493 42010 . + . ID=g6187.t1.exon2;Parent=g6187.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 40493 42010 . + 0 ID=cds.g6187.t1;Parent=g6187.t1 #PROT g6187.t1 g6187 MGSAASLPKRQVAPETTAATKSGKDVKDTANTKEKGMTAPKAGKDVKDAKDPKAGSVARVASHKATSTPPHASPLPIKKADTKSMSSMENILDSAITSIYRFAAHDENDANSGSRIGLGGKESTFVVKVDEKVVKFSVRYEGHAHEVRCVTSLDRILSRDVPALIELTNKAAPPAHASSFYLLLLVQRYLLSRINTTTLTEWSVREDETWIQKDTGFDIEGALDALGDMDDATSLKNALSIADTSAPSAPRQRSYSLAGARMSITGSSNSLIAPSVATGPQSTVPLVAVIGSLNADLMAKQSPDQLMPTENKSQPAAHFQVSAGGKGANEAVSVSRLGVRTALIGVIGGVILPNGVVRPDEFGKFLLRELRDQPSNISTDSIDVVTSEADGKTAVATGVSLIVINPHLRKNITVPCAGANRTVGQKQLETVSRVVAAGARFVVMQNEIPHDVNLRAAVIARSRGATSVLRGYPVLAPNPQSPVDLLADIGTFDVAIFLSFEIDNMIKDSRELAKAAAAASSSSSPSAAAADLPAIPNTQPGLSGYLVAARYMVSRGCKCVVIHHLAIGLLCYDQNGPFLVPNVEREANVVPEFIGAVDALIGGIVAGLTKFGDGPDSFRRSVVWGAALSTKVTEGPGPWFLPKNYDDFLIILKTKKLDECAIRGEASKDTMGNEAAALIFGAKVDEIRAVLAKKGPLAEKLTKGKDWQGQTALHLAIMCGLDKVTAQLLKANADPFARDRYGQDCHGRLKLLGPTSKPEMAEIAAQLELVVEFSKWTVGESTSAALIPRLCSVRDNELVSSIVASCVATGNLDGLLPKAHELPEERSILHSAAKNNNAELLRMLLKLPEMKTNKLKVRLPKSGDTPLHVAVRNSHYEAAKIIIESSVEHLGLKNEQGKTPMDIAIEMDKPENANFLFNLQGLAKRSDVFISYGHVDGEKGDTEFATWLKAQLEANHINVWMDTRRIGEGNDWRKDIEDGLNNTKILLFLVSQKSLKSKYCTNEFQFAQKHQLHIIPILPQDKLRADLRAGVMEAQEKHSYLNTRQYFQFALDATVSQEMDRLRQAGNDADAKKKEEEFWATRIQDLVKQ # ORIGINAL: g6182.t1 original gene structure, not modified by PASA NODE_87_length_42081_cov_43.0188 AUGUSTUS gene 6165 17743 . + . ID=g6182;Name=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS mRNA 6165 17743 . + . ID=g6182.t1;Parent=g6182;Name=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 6165 6206 . + . ID=g6182.t1.exon1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 6165 6206 . + 0 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 6512 6598 . + . ID=g6182.t1.exon2;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 6512 6598 . + 0 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 6782 6857 . + . ID=g6182.t1.exon3;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 6782 6857 . + 0 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 7215 7443 . + . ID=g6182.t1.exon4;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 7215 7443 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 7581 7890 . + . ID=g6182.t1.exon5;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 7581 7890 . + 1 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 8014 8623 . + . ID=g6182.t1.exon6;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 8014 8623 . + 0 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 8793 9158 . + . ID=g6182.t1.exon7;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 8793 9158 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 9325 9864 . + . ID=g6182.t1.exon8;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 9325 9864 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 10007 10279 . + . ID=g6182.t1.exon9;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 10007 10279 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 10400 12097 . + . ID=g6182.t1.exon10;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 10400 12097 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 12228 16437 . + . ID=g6182.t1.exon11;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 12228 16437 . + 2 ID=cds.g6182.t1;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 16606 17743 . + . ID=g6182.t1.exon12;Parent=g6182.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 16606 17743 . + 1 ID=cds.g6182.t1;Parent=g6182.t1 #PROT g6182.t1 g6182 MADKKVAVEASSPTSGTEARRWSLWVLAVFGLLFASLFAGDVMHWRLSKNGVSDDSDFMDIAEDGSDPLLITPPPANERETVCMIVDGFGFLNPSSGIATAYASLAEALARNGANVTVVYTQGLESSVLSNAQDYYMNRGVYLVTLPASGLVFNAPANVRKSYESYLWLRGQNCDIAHFHALGGSGYFTVLAKRQGLFPYAPMIVVGAHSIGGSMLKNLDKETAVDTPTYDLTDLKEDYMEQKSLELADRVVSPNQWVLDYLSRWRWNTDPRRVSVIPNVVPNYVLERTPSAPAKIVAPKEIVFFGRLSALKGLVLFCNAIDMAKPTLDPDTQVTFLGMDVLVRYRSSSDFIRRRAENWPFKVKIIATMNGREAIEYLSEPRSGRVAIMPSLMEVSPYAIVECIYANIPFQASNLSGNEQLVDVKVRDLVLFKANNSAALANRIEGIFENGAPTATPLVPASEITSQWIDFHATLFEERVIQISSSASVVDVHNGPLVTVVLVHHNRHTLLKQAIESLEAQTYKNFEIVIVDDGSTDTRSLAFLRQLSAAWEDRGWRVLFEPNRYLGAARNTGARNARGKYVLFMDDDDYAKPHQLETYVTVAEKTKSDVFTSGHDLFVGMEPPPGEGGYIYRYVPLGPAKLVGVLENCFGDSNMFVRRDFFLAFGGFTEDYGVGFEDYEFLAKITVAGHKLEAISEPLHWYRRHGASMSSETNLLQNRARYLRAFENDMEVAHLVHIVRRDGGNTTSPVDGKELCNTDTNCTVGICLAGVCSAACPGPAPPSGICNDRMRAINGSCYYPVTKEVNATCPGNVTALLGVCYLANVTCAASGNALSGGGCNTTCSVCERDCRGVCGGSAYYTSDYVCEVPSSSSSSPVPTATSASLTATASIATSATPSPSLFSTAAFATPTPTASPTSTSVPRPSGSSNPVITIDPMYWDPLDNTTYIVDDGYIYLNFDSYLHADPRLRIRLRASLVVGGELKPLPDWIVFIRGRLSFFGVPTLKDNPLGKHVIQLSGTDQFRRVVPALFSIVVVPPIQRQQYFSIAMRLNAKFESFSALDKVQVVQGLGRFLPFEQKDIRVLNVTKGSSIVDFTVNSVASLDGANSVLTLLVDGLKPNGTLVRTLGYKVLGITGNIPLPPVTSSSISAASSTVSSTIGVSSSVETPSATTGASFFATTGAFSQTTGASFSATTGAFSETTGAPFSATTGAFSETTGASFSATTGAFSETTGASFSATTGAFSETTGASFSATTGAFSETTGAPFSATTGAFSATTGAPFSATTGAFSATTGAPFSATTGASFSATTGAPFSATTGAPFSATTGAFSATTGAPFSATTGASFSATTGVASSTVVSATTGAFATSTFVPTVVASSSVGATSSAKPTPTGPVVVIPLAIIDPLDDIIYILDEAIIDPLDDIIYILDEGAIFANVDAKVHADPRLRLKFTTSSIANGVARPLPDWLVFTRGRLTYFGLPSRTDNAVGTTVVQLNAIDQFKRVVSRRFSVQVLNVAPPKAQFKIALTLFAKFESFSGLDKVNVLGGLGGFLGVPSNSIRFLNVTKGSTVLDFTLKNVDASAGSAAFDNMKAGLASGTLVKEIGYKVKSLDMPVDIVSSSSSLVPSSTPVSSASVVVTSTRSSSFVARSATTGAPFSATTGAPFSATTGASISATTGAPSETTGAPFSATTGAFSETTGAPFSGTTRASFSATTGAPFSETTGAPFSETTGAPFSATTGVFSETTGAPFTATTGAPFSATTGAPFSATTGAPFPATTGEPFSATTGAPFSATTGAFYETTGVPFSATTGAPFSETTGTPFSETTGAPFSETTGAPFSETTGAPFSATTGAFAATTGASFSATTGVASSTVVSATTGVFATSTFVPTAVASSSVGASSSATPTPTGPVVVIPLAIIDPLDDIIYILDEGAIFANVDAKVHADPRLRLKFTSSSIANGVVRPLPDWLVFTRGRLTYFGLPSRTDNAVGTTVVQLNAIDQFKRVVSRQFRVQVLNVAPPKAQFKIALKLFAKFESFSGLDKVNVLGGLGGFLGVPSNSIRFLNVTKGSTVLDFTLKNVDASAGSAAFDNMKAGLASGTLVKEIGYKVKSLDMPVDIVSSSSSLVPSSTPVSSASVVVTSTRSSSFVARSATTGAPFSATTGAPFSATTGASISATTGAPSETTGAPFSATTGASFSATTGAPFSATTGVPFSATTGAPFSATTGAPFSETTGAPFSATSGAPFSATSGAPFTATSGAPFSATTRVPFSATTGEPFSATTGAPFSATTGAPFSATTGAPFSATTGVIASSSRAPSSTFVPASTFTPALVSSAPSSSPTPTGPVVVIPQAFWDSIEDITYVLDRGYIFANVDPKLRADPRLRLNFKTSSIVNNVQRPLPNWLVFVRGRLTFFGVPALKDNAVGTTIVSITCQDQFKRVSEVRFRVIVLPKQDVVEDFKIKLTLFAKFESFSGLDKVAVLQGLTTFLKLGSSTPRFLNVTKGSTVLDFTVDNLAPGSGVGMLNNLTTGLGPNGTLVNTLGYKVKGLAGPAEPVTSSSSIVPSSTTAATSTVIVTSTVATTFSTTVVVQPSSTAASSSAVATASSTAALSSTASQQSSSSATSSIASSVTQVSSTSTQTVISSSSSILAETSTPVPEVISSSSSSSVPVASSTASSVASSVVSSVASQPSSTSVLSATPSFVEQSSSVSSTSVTTSSAEFVVQSTTAVSSSPVASSSVQSSNATSTAASTPERPSTSSTFIPTIVPVASSSVVPASSSLSASPTSTIPPVAIASSSKNTLTAVLVGVLVPVGAILAALVIFFWWRRRARRGAYYPSQREQDMSRQDDEFRAVVPVSTSPVVAKKPGRPTDAPPYVPPPVYPGGRDEEKSTAAPPYRPPPDYPASRPASDVDREGTVPAYRPPPDYDGALALAQGQQVHDGGVPVYKQPPDYAGALALAAANAGAAAADGSIPAYRQPPDYAGALALGAAAAQHQAEGSTIPAYRQPPDYGGALALGAAAAAQEQHASGGLPDYRIPPEYASVSSRLSTVLDPSPGAVPTETVVPVQNAAISLPEYKHAPSYRERSSLPAPAAAPLPAAPSAAAAPAKQPGVVPQYARPPTYDAVRSLQVRRSLASAAPGTTGTAQTDSAGPSSPTQPPQSTPPAEPSADADASAPASASRPASGVMPDYRFPPTYKSPENRRRS* # ORIGINAL: g6186.t1 original gene structure, not modified by PASA NODE_87_length_42081_cov_43.0188 AUGUSTUS gene 31155 36931 . - . ID=g6186;Name=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS mRNA 31155 36931 . - . ID=g6186.t1;Parent=g6186;Name=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 36812 36931 . - . ID=g6186.t1.exon1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 36812 36931 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 36233 36631 . - . ID=g6186.t1.exon2;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 36233 36631 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 35719 35949 . - . ID=g6186.t1.exon3;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 35719 35949 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 33456 35539 . - . ID=g6186.t1.exon4;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 33456 35539 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 33143 33269 . - . ID=g6186.t1.exon5;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 33143 33269 . - 1 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 32805 32934 . - . ID=g6186.t1.exon6;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 32805 32934 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 32306 32565 . - . ID=g6186.t1.exon7;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 32306 32565 . - 2 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 31928 32014 . - . ID=g6186.t1.exon8;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 31928 32014 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 31598 31705 . - . ID=g6186.t1.exon9;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 31598 31705 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 31155 31403 . - . ID=g6186.t1.exon10;Parent=g6186.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 31155 31403 . - 0 ID=cds.g6186.t1;Parent=g6186.t1 #PROT g6186.t1 g6186 MEDWFEVVASCDNVTAHMPYGVSAIAFDPLEELLWAGYQNGRVTSYSPSTLERYTSWMGHASEVRQIHSYEGGILTLSSQSIHCANRGGLVRFSTSTESMIDLQSVARVSPSQNTFLVGGLQPTLLVLDAVRGRVLKEVPFDDGAAILRRGRMMCCATPSGKIHLLDPISLKQEHTFEGHSGTISDMDVTGNLLVTCGFSNRNNMLVPDPFVKVYDIRVMKALPPLQFPSGAALLKFLPRFTSRLAMVSQMGQLQILDAQQGLSAGLLYRQISVNAPEAFVTSFDVSSSCNFLAFGDSSGLLHVWSSMEEAAVNTYSRESDVPDEVEPVLPLHVDDESMPLSVIPMPVDNGGHLLSHWRPLQTAVIRRPPVPVDKQILASMRLVDFVGYAPNPHGLRRNLVPYPKHTLALRKANQPGKRGGQRRTSFGRKKETKVPAQYLQVEIKYSRLGIEDFDFAQYNRTKFGGLEPHIPNAYCNAMLQALYFAAPMRVLSQSHVCAKEFCLTCEMGLLFHMLDGARGANCQASNFLRAFRTIPQASALGLVLPDDFAAAKANFPRLIQGFTRFVVQQVHTETVPSTVDAAPIEYSPFAGAPGYGSARDGATAGGPNKRGGKVAGAAGRGGGARTTSPVPSSGGASANEQQASKGGPSVAQQVFGAKVISRSRCVTCGFVSVRETDSFVFDLSYESVAAAAAKVQAQGGSAAPQQSSVTSRTEAMPVAPGSPNMGARGSPRLESTPVGITFGQLLSDSICREQSTKAWCEKCARYQPMVQSRGVHEMPPVLIINCAAERDADLQFWTQATVPPPPARNRGGPFNLPVPAAAGAQEDHDDRSVASDDFFSGDEFSTGGSPQLGPSQLQPNKFGGSVNNLPVPGGSSATQAHVHREWLPEAIRMWTEDERVVVADASCEDAEGSEASRGAVYDLLSTVAHVRDERSGGNLIAHVKVDPTYHDRLGSQSSGDGWFLFNDFLISETTSANARHFDTSWKVPCVLVYALRDISKNWNMPIKLPIDDRILMLENSLSRRKPGSAVAAKAHLAAPLTFTPLSSTELPQPGDIFGIDAEFVALNPEEAEIRSDGTRSTLKLAQLSVARVTVIRGHGPLEGTPFIDDYIATSEQVADYLTKFSGINPGDLDAAVSSKHLTSLKATYLKLRFLIDRGVKFVGHGLKKDFRVINILVPPEQIIDTVELFSLKRQRKISLRFLAWYLLGIDIQAVTHDSTEDARTALRLYNKYREYEQRGTFEAKLGEIYDAGRVYNWKAPHWT* # ORIGINAL: g6184.t1 original gene structure, not modified by PASA NODE_87_length_42081_cov_43.0188 AUGUSTUS gene 22489 26523 . - . ID=g6184;Name=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS mRNA 22489 26523 . - . ID=g6184.t1;Parent=g6184;Name=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 25987 26523 . - . ID=g6184.t1.exon1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 25987 26523 . - 0 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 25571 25744 . - . ID=g6184.t1.exon2;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 25571 25744 . - 0 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 25173 25293 . - . ID=g6184.t1.exon3;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 25173 25293 . - 0 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 24809 24917 . - . ID=g6184.t1.exon4;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 24809 24917 . - 2 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 24425 24620 . - . ID=g6184.t1.exon5;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 24425 24620 . - 1 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 23790 23970 . - . ID=g6184.t1.exon6;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 23790 23970 . - 0 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 23295 23579 . - . ID=g6184.t1.exon7;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 23295 23579 . - 2 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 22766 22899 . - . ID=g6184.t1.exon8;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 22766 22899 . - 2 ID=cds.g6184.t1;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS exon 22489 22566 . - . ID=g6184.t1.exon9;Parent=g6184.t1 NODE_87_length_42081_cov_43.0188 AUGUSTUS CDS 22489 22566 . - 0 ID=cds.g6184.t1;Parent=g6184.t1 #PROT g6184.t1 g6184 MADDAHSKGDDEGLKGIRGDDDSLDGSHASSSPTLLSMSPSLSSSLSSSFVPGGMRKKVSMQFRDGGLTRKVSDAGGGGGGIARKVSIRGERKPDTKKASDAVIDPAVLATISDRYKKCTEINSPHLDLSSIDTHMIPVFIFEATWVTELYLYSNKLTTVPPEVKSLVNLKILGLSENQITWLPEEMSALTQLSVLDLRHNRLNDIPGVIFMLTSLTKLYLRFNRLFTVPAEIESLVNLTLLSLRDNRIDDIHTNIGKLTALNILDLQQNALGELPQELCECKNLVSLNVQHNEIKALPENIGDLVGLTRLGLRYNKLTELPVSLGKCVKLEELALEGNELTTLPLELGANLSAVTSVMLSRNQMADVPDALLSLKGAQAFVLAYNLFSEIKPGFFPAIQRVVRLDLSNNNLKSLPADISFLRLLKELNLGTNKLESLPESIGRLQELESLILSNNLLISLPNEFVLLTRLKTLDLEGNKLQNLPEEFGRLRSLVTLTIQSNELTQLPESMGQLMSLKTLTISENKLTSLPVGLGGLISLTHLYMNDNAIDDIPLEICLCTRLKVFNLDDNPLKGIPTKVVEMGANDVIYHLKEKFEKARKKKS* # PASA_UPDATE: g6183.t1, single gene model update, valid-1, status:[pasa:asmbl_9809,status:3], valid-1 NODE_87_length_42081_cov_43.0188 . gene 18256 21494 . + . ID=g6183;Name=g6183.t1 NODE_87_length_42081_cov_43.0188 . mRNA 18256 21494 . + . ID=g6183.t1;Parent=g6183;Name=g6183.t1 NODE_87_length_42081_cov_43.0188 . five_prime_UTR 18256 18372 . + . ID=g6183.t1.utr5p1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 18256 18484 . + . ID=g6183.t1.exon1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 18373 18484 . + 0 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 18681 18723 . + . ID=g6183.t1.exon2;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 18681 18723 . + 2 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 18973 19037 . + . ID=g6183.t1.exon3;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 18973 19037 . + 1 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 19276 19598 . + . ID=g6183.t1.exon4;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 19276 19598 . + 2 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 19804 19894 . + . ID=g6183.t1.exon5;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 19804 19894 . + 0 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 20222 20358 . + . ID=g6183.t1.exon6;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 20222 20358 . + 2 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 20757 20813 . + . ID=g6183.t1.exon7;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 20757 20813 . + 0 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . exon 20956 21494 . + . ID=g6183.t1.exon8;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . CDS 20956 21162 . + 0 ID=cds.g6183.t1;Parent=g6183.t1 NODE_87_length_42081_cov_43.0188 . three_prime_UTR 21163 21494 . + . ID=g6183.t1.utr3p1;Parent=g6183.t1 #PROT g6183.t1 g6183 MSVFWRAGRLSGNVSSLVRARAGYATQAAKKPKILITGSLGQLGSELSKVLRAKYGVANVIESDIRKAPESNTGPFIYGDVLSYYQLESIVVNERIDWVVHFSALLSAIGEQNPQKALAVNVTGFQNVLELAKVHNLRLFCPSTIGAFGPTTPRENTPDLTIMRPTTIYGITKVHMELLGEYYHARYGVDFRSLRYPGVISADTEPGGGTTDYAVDIYHWALKKGNYSCFLSENTRLPMMYMPDCLKATVMMLEADPAVLKQRTYNVSAMSFTPAEIASSIRAHIPGLKMEYKPDFRQKIADSWPMSLDDSCARNDWGWGSEYDLNAMTADMIVRLRKRLNIPA* # ORIGINAL: g9774.t1 original gene structure, not modified by PASA NODE_1897_length_8669_cov_40.8925 AUGUSTUS gene 1762 3490 . - . ID=g9774;Name=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS mRNA 1762 3490 . - . ID=g9774.t1;Parent=g9774;Name=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 3363 3490 . - . ID=g9774.t1.exon1;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 3363 3490 . - 0 ID=cds.g9774.t1;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 3166 3229 . - . ID=g9774.t1.exon2;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 3166 3229 . - 1 ID=cds.g9774.t1;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 2931 3000 . - . ID=g9774.t1.exon3;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 2931 3000 . - 0 ID=cds.g9774.t1;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 1762 2819 . - . ID=g9774.t1.exon4;Parent=g9774.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 1762 2819 . - 2 ID=cds.g9774.t1;Parent=g9774.t1 #PROT g9774.t1 g9774 MFGNDRGGYRLANITEQADSFELSDVHDRFPEVDSASIIRRKKEPSKARVFVQLLGIVAFVVIQSYLIYSVYSLKSDIKDLQSRLASVEESNSRLENSVAAIKASSDDDDSKGASLATLNQLADSVSGLSEKLAALDGDVSSTRTLIQSANVEFTHLNNTVNVASGRVDNVVRGIAVYSAYVNASIAAGVTQEYVSRSIADALGPITEKVDEFEERIDGAGGIVTNVLYFGEQMTKLNEAWNGLSSSDVRHENDIRELQSLTQQAKGEMDEAVASVERLGEISDDLNVRVATVMELLQSMNNESSTSGGGGGGGGGGGGGIDTKALENVLGSISTLERRIDAYGHALSANATAVGGLSAAQTVLSARISVVEEVQVNSTVAITRMGTILKSLEKVNVTLLVSHLADEERELVTVQKALSTLVHDVDTISDRLQNLEVKS* # ORIGINAL: g9775.t1 original gene structure, not modified by PASA NODE_1897_length_8669_cov_40.8925 AUGUSTUS gene 4635 8576 . + . ID=g9775;Name=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS mRNA 4635 8576 . + . ID=g9775.t1;Parent=g9775;Name=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 4635 4664 . + . ID=g9775.t1.exon1;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 4635 4664 . + 0 ID=cds.g9775.t1;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 4881 7598 . + . ID=g9775.t1.exon2;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 4881 7598 . + 0 ID=cds.g9775.t1;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 7771 7962 . + . ID=g9775.t1.exon3;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 7771 7962 . + 0 ID=cds.g9775.t1;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS exon 8367 8576 . + . ID=g9775.t1.exon4;Parent=g9775.t1 NODE_1897_length_8669_cov_40.8925 AUGUSTUS CDS 8367 8576 . + 0 ID=cds.g9775.t1;Parent=g9775.t1 #PROT g9775.t1 g9775 MDGHGGQQNLWRPFSGDGQIQPDGNVTHPVMPVNANPNANVQRTQSAQWSGAVGGLTHPSHRQYALQQHTGQRVAMQNVQPQQPMMHEFDGGVYAAQVTQPTSITQQLMAQSHGGALQQQLQQQQQPQQLTQRHLLLFQQQQQQQQQQQQQQQQQQQQQQLLSHSSISPEHQQYLHQQQQFQQQKLLQHQLQQQQQQHQLVQPQQQHSPAIQYLSVSGPQSQLHSNRQPQQQQLSEQHSVAVIPNSGMPSVQSSNPLAHHDVGMMQQVQQVHQQQQQQQQQQLQLLHQQMVHQQQQQQQQQQHFAQSHSVPSSSEAASFHSYPSRDTAQFGAIGARPGPMSVTPLHGHVTGARHVMDPVVHTLPVQSYAGLGSSTAGHVLAAGGMSGGGMAPFATSLTGIPDRDASAIEAAAGLSQLRHDLGATAVTPVTPVAPVTLAAPVPPVAPTVTTFVHIPTPTPVAPALAPAVAHTPVTSAPSSRPVAPATPAVVPLVSSASLPVVTESTVPPTTAPTHAIQTVQTVQAVQATAIKSESSEEDENVDADVQRDSDVNADSPVAPVALSHDGGHVRRKAALVKKKADDGEDDFVGSESESSSEGDDANDDSDFNDSNIDVEDLAGSDANGVSNSGDDDDDEDEESDDEDEDDDYGRKNKRKGKKPAAAGGKKGGLSKGKKSKKNKKGTAANPKQKKPSRLKKVARDDDDGSGDGSDEGDGEDAIGARGREDESERSGLAAKTRRPQKEWIAIDDPELYGLRRSSRARKEVERPTFVPSGSNDDDSDVGGTKRRKGRKRVVSDDDDSDGDFGGGRKPRRGRVMSGADDDDDDVDDDDDDDDEFDGLKHAIAPRKSREKMKAKALAKTAVKSAKRKRGADSDDDGAWGKQRSAYMRTSTRRAATKPLNYREDSADEGRDDDDEAGSDEEEYLDGPGHGGPEVEDNRPSIDRVLYDRLNGDGEKEYFIKWEGKAHIHNSWHDAHELKYDMDIKGLKKLDNFIKRTAEDEAYFAATTTEVGRLFGVDCIFVESVVIVLLFAAFGIRRLIMLEDTPRYPR* # ORIGINAL: g992.t1 original gene structure, not modified by PASA NODE_2531_length_5990_cov_40.8409 AUGUSTUS gene 1513 5787 . - . ID=g992;Name=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS mRNA 1513 5787 . - . ID=g992.t1;Parent=g992;Name=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 4125 5787 . - . ID=g992.t1.exon1;Parent=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 4125 5787 . - 0 ID=cds.g992.t1;Parent=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 3602 3832 . - . ID=g992.t1.exon2;Parent=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 3602 3832 . - 2 ID=cds.g992.t1;Parent=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 1513 3314 . - . ID=g992.t1.exon3;Parent=g992.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 1513 3314 . - 2 ID=cds.g992.t1;Parent=g992.t1 #PROT g992.t1 g992 MTDRWASSGTAGNESDEGDFPHIELEDIELGRNTLGRALAESERKNGEYNMGAELGGSAKYDSGVYDGDDAPATGDTAEATAHGSSDSKGSSSDQSKRGGVGVGVGRHQGGSTRKRRRKTAGPNAASVTYQSRKVKDTALIALRRFKRPLWLSWQVMLVVATLLALGLGFGFYTRQRLFDNIDTATMTAATETCTKIAEEIGIAVGVARVYNRGTASAFFAARGNVTEAMYTSFAKLTATSGTPIDSSSPVNNAPLMLRRYAVRLLVYAPVVLGELRSQYEREALAWAPGFEFRDFNPVAQTIGTAVNRSVYLPVFYALSLSGDTPVRVNLGYYGVDLSNLFSTYPFYTARDKAIDTILGPLYYADNFFQEPDAHIATIFPLYNSTDPIPNESDRAASNYGFVTAMVNIAHIIKTNNNKRAYKVALFDRGTSLATLYGGLTLYSDVSGINGEAESGKLGGIENIIATAVVSGSIGHELALYCAPTAKSTNVDSIPPWAAVVLLVGFSTLIATVVLLVAKNRHILHEKNAEQTKTMEEAVRGRKLAQDMIGYVNHEVRNPLNGILGLMDLVLSVLHDVQAKEAEAIAEFGLVMPAFAEPVRDRIETRQSAVKNLLAGMETDIETARNCCQLIGHVVNDILDIRKIEEGRLVLNKSETSLARLIANVARIIRPKLDERPAVSFSAHFEDTIRLRCDVFRVMQVLLNLLSNAIKFTERGNIKIFVEVNKTEEVREVTFEQRPASKDLFRGFRRQASTTDRSSETGASASDALGGSRATTSMSDIESVVRGEMTFVRFSVEDSGRGIRQIEKDLIFKPYVQVDPTDGTRFTGTGLGLFLCSKLVQLMGGSIGFESEYGVGSTFWFEIPALAPESSNEAFRVTSFAPSTTESANDVMQSSSRACAREGATGKGRSSSSAAEKTQSHSGGGPGTAPRVGNSPELLRVALQQQRSTPESPMRERNTHDGDDAGDGHNVVTRKRSGSTRSTSSRATPGFANLEAIVNIPSVASQRRIAEEASNDGVRMAALQNMPLPGHIPSASVAGGVKSTVVAASEAGSALEPKKMILVVDDVVVNRMVLRRQLESLGYCVAMAENGAKAVELARSKRFYAIFMDVQMPVMNGLEATRAIRGRDSAGDAHPQQQQQQSSDADALDRTEPTVPICGLTADIKPSDVRSCLLAGMDFIVAKPATKESLETAFARIATGHMAARMQLNDAMLTGPDAMGFTVQSSCDMTM* # ORIGINAL: g991.t1 original gene structure, not modified by PASA NODE_2531_length_5990_cov_40.8409 AUGUSTUS gene 159 1250 . + . ID=g991;Name=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS mRNA 159 1250 . + . ID=g991.t1;Parent=g991;Name=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 159 239 . + . ID=g991.t1.exon1;Parent=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 159 239 . + 0 ID=cds.g991.t1;Parent=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 362 466 . + . ID=g991.t1.exon2;Parent=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 362 466 . + 0 ID=cds.g991.t1;Parent=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS exon 1077 1250 . + . ID=g991.t1.exon3;Parent=g991.t1 NODE_2531_length_5990_cov_40.8409 AUGUSTUS CDS 1077 1250 . + 0 ID=cds.g991.t1;Parent=g991.t1 #PROT g991.t1 g991 AVVGDVDYNDVELSVGAKKLLVRLSDEATREQLEAIKPDFGRMIAADNFGVVKGVIVTMAGKVGYWSKLLGNKTSLLARQCSSRGGDLLLSLDNCEAGRVSVAGRAAVVVEGKLNLPTC* # PASA_UPDATE: g4728.t1, single gene model update, valid-1, status:[pasa:asmbl_7448,status:3], valid-1 NODE_456_length_23402_cov_42.2243 . gene 5351 7339 . - . ID=g4728;Name=g4728.t1 NODE_456_length_23402_cov_42.2243 . mRNA 5351 7339 . - . ID=g4728.t1;Parent=g4728;Name=g4728.t1 NODE_456_length_23402_cov_42.2243 . five_prime_UTR 7263 7339 . - . ID=g4728.t1.utr5p1;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . five_prime_UTR 7091 7132 . - . ID=g4728.t1.utr5p2;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . exon 7263 7339 . - . ID=g4728.t1.exon1;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . exon 6997 7132 . - . ID=g4728.t1.exon2;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . CDS 6997 7090 . - 0 ID=cds.g4728.t1;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . exon 5351 6619 . - . ID=g4728.t1.exon3;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . CDS 5913 6619 . - 2 ID=cds.g4728.t1;Parent=g4728.t1 NODE_456_length_23402_cov_42.2243 . three_prime_UTR 5351 5912 . - . ID=g4728.t1.utr3p1;Parent=g4728.t1 #PROT g4728.t1 g4728 MGKNKSTKKKSAQQQQKPQAKKSLLDEKAEAGVSAAPAEVEDGPEDDAAASTSATPAAPAVVEDAKPAPVAEEVKPIPVAVVEEAQPTPAPEVAPVAVASAAPEVASAPIAVPAHAEAHAEINAETPKITSFPEPKTPVLAASPAEPSITDTKARSASTASTSSNSKAASSAPQQITPVKEAPKAAEAVLSTSPSARADERKASFAASSPAVDSASSSSAGPSAIVDNVELAQTPKKAAAIPEEAKPTDALIKKNNESAGCACTLL* # PASA_UPDATE: g4730.t1, single gene model update, valid-1, status:[pasa:asmbl_7444,status:12],[pasa:asmbl_7446,status:12], valid-1 NODE_456_length_23402_cov_42.2243 . gene 11086 19104 . + . ID=g4730;Name=g4730.t1 NODE_456_length_23402_cov_42.2243 . mRNA 11086 19104 . + . ID=g4730.t1;Parent=g4730;Name=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 11086 12124 . + . ID=g4730.t1.exon1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 11086 12124 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 12229 13241 . + . ID=g4730.t1.exon2;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 12229 13241 . + 2 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 13399 13908 . + . ID=g4730.t1.exon3;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 13399 13908 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 14206 14367 . + . ID=g4730.t1.exon4;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 14206 14367 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 14562 15736 . + . ID=g4730.t1.exon5;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 14562 15736 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 15950 16043 . + . ID=g4730.t1.exon6;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 15950 16043 . + 1 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 16384 16428 . + . ID=g4730.t1.exon7;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 16384 16428 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 16625 16748 . + . ID=g4730.t1.exon8;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 16625 16748 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 16918 17078 . + . ID=g4730.t1.exon9;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 16918 17078 . + 2 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 17206 17266 . + . ID=g4730.t1.exon10;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 17206 17266 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 17597 17676 . + . ID=g4730.t1.exon11;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 17597 17676 . + 2 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 17862 17939 . + . ID=g4730.t1.exon12;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 17862 17939 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 18245 18262 . + . ID=g4730.t1.exon13;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 18245 18262 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . exon 18514 19104 . + . ID=g4730.t1.exon14;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . CDS 18514 19068 . + 0 ID=cds.g4730.t1;Parent=g4730.t1 NODE_456_length_23402_cov_42.2243 . three_prime_UTR 19069 19104 . + . ID=g4730.t1.utr3p1;Parent=g4730.t1 #PROT g4730.t1 g4730 MAATTVFPSVLTLMILVGIFIPIGIVDTAFTTSDCPAAIFNYTWSPVTSQSACDVMSPLCSQELRFMSTEGRVMCERINASSFSFDFAVSSGSSGACGTATRQVFCVMRIVTTASNGLPDRIVVACGNATRPSIDSTTALTDSGSLRLGNLLTVRILQRPDVTTTDYVYADAVCHALNAGNDNAVNAASAPLGVAVIPPGRYSHSGFRFYANRSVSIMAVGPGVIISCVAPPLDAFGSSAHYFLHATNVSISNIFFEHCNRGIVSTDAEHNKSLFISFTNVVAVFAEGVSESVVYLSPSAAPVTVRVTGGSFLSTPNTTCVREGGFLSVQDALGRRDIVLSASVFGGFCAAGRGGFASVRGHNAGMTIAQSTVSVCVAERGGCLSLAGNASLLVENSRFSRGVAYAPDAPASPATDSAGSGGIILASEFSTVRSRNSTFETSVSASSGGCIALFDYSSLDFTEAYFSACTSRYGGAIALYPSQPNGAVSLFTATTFSECLASHGGALFAGSFASFHTHLCVFTDCAAMISGGGIVTQEIDEWLSTGDVFVKLLSGQNGGAVQIHHIVDVTLLDKVESARILFRNSTFSSCQAALGGGAIYAVSIPKPVAIPQAFAFTQHASIFEDVYAYVSNGSLPVVLQIIDSLFSGNAASQGGTVVVEGLMHPSVERSQFLDSIATTGGSISVSGAAWLAVSGCVFLRSLGAVGGALAFTDNSHGLVLGCQFIACVASSAGGAVAATVQARVQLLRVTGVQNIALELGGFAAFLDRTVGLIDQSSFGYNFADESGGFAVVAYNSTLTVTNVDVTKSCSTMGGSIRIVRNAKLIMANVTAVRSTAVSGGFMFLRNYATARLDNVTIYASAAAGNGGAFFIEVDAQLYVSASRIDFSVALRGNGGVAYLSGNGKATFMDTVVTRSNAINGGFAFVTSLTGVEDLRACALTVTIDAFKDYTQVYDNRLHPVLSISGVRSNSSSAQRGGFIYAIGGIVSIGENSVMKNSFSVDQGGAVFYSMLDVTGSGQSSSSFHVANSLFADCRSSLGGAIYVDSSTTLGNLTVDFSISNSEISSSSALAGGGLFVYTSDARRMPDVSTVRFTSNVAKFGANITSRVAGITTVPAISNGTTVFSGSAMPTFKIIALDTLGQVAYVPPSDSSLRVDLLHTDLTAVGPAEARLLGGDSKNIDDGIVIYENIQIRGSKAGEYVLRAIAPVFGASIAVAVNLGSCDGRKVQVDSTGETICSTLAEASASSGKISAGALSAAIVVPTLACVAGVAAAFLFGLRAHRKKVSQETHVRFVEKNIANRADLRDLEIPRENVDIQAKIGEGEFGVVCKGRVFLNNRWKTCAVKTLKEGSAESQRIAFLAEADVTKNIRHANIVGLLGMTSLSEPMLVMFEFAHHGNLRSFVQQLPVSAHGAPALELEFRQFAKDIAAGMAHLASLKIVHRDLAARNCLVADLDGSYTVRVADFGLSRNTGETDYYIKTKNLKLPVKWLAPECLTKKSFSSATDCWAFGVTLWEMWTFGEAPYAGIANGTVCAHVLKGNRLGKPVHCSADVYEIMLSCWNIVAAERPSFEKLSAIFERLISAEASPAAPVHPSAGSALLASATTTRGHGNIFNAAGELVGAHAGSYHNLECETDGLTGPGGDYRELEEGHVLDRQKSTRHGDGQYISLEMSDLKRSTRLSESAAHLLDGVDGQIAAGEQSESEA* # PASA_UPDATE: g4727.t1, single gene model update, valid-1, status:[pasa:asmbl_7443,status:3], valid-1 NODE_456_length_23402_cov_42.2243 . gene 2015 5193 . + . ID=g4727;Name=g4727.t1 NODE_456_length_23402_cov_42.2243 . mRNA 2015 5193 . + . ID=g4727.t1;Parent=g4727;Name=g4727.t1 NODE_456_length_23402_cov_42.2243 . five_prime_UTR 2015 2113 . + . ID=g4727.t1.utr5p1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . exon 2015 2383 . + . ID=g4727.t1.exon1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . CDS 2114 2383 . + 0 ID=cds.g4727.t1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . exon 2508 2711 . + . ID=g4727.t1.exon2;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . CDS 2508 2711 . + 0 ID=cds.g4727.t1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . exon 2888 3088 . + . ID=g4727.t1.exon3;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . CDS 2888 3088 . + 0 ID=cds.g4727.t1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . exon 3512 3956 . + . ID=g4727.t1.exon4;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . CDS 3512 3956 . + 0 ID=cds.g4727.t1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . exon 4249 5193 . + . ID=g4727.t1.exon5;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . CDS 4249 4472 . + 2 ID=cds.g4727.t1;Parent=g4727.t1 NODE_456_length_23402_cov_42.2243 . three_prime_UTR 4473 5193 . + . ID=g4727.t1.utr3p1;Parent=g4727.t1 #PROT g4727.t1 g4727 MAAAPGSSLAGKDFVAAKEEVLSWIVQLNGPQRKSFMFDLVEQSDRCTRSILHAHLNPLTRVDFVSALPDKLAKHVLSFCDAKRLCTAAQVSRKWQNMADDDYLWHRMCAQHINRKCHKCGWGLPLVLSEVNDDGQRAKRLKRRWKDIYAERLIIERNWRKGSYNVRKLTGHAEGVTCVQFDDHRIVSGSYDQSLRIWDMRSGECIKVLEGHESSVRCLQFDKMKIISGSQDGKVFVWNIETGAVVRKLEGHTSAVLSLQFDDKKLVSGGADATIRVYDFDGGCCRLLLGHTDYVNCVRLHGDHVVSASDDGTVRVWDIYKQACLSVLEGHNAEVNTLHVSHNTIISGANDNTLKVWNIETGKCTSTLFGHTEGVTCVQFDSLRVVSGSQDLTLKIWDKESGLCQHTLKGHLGAVNCLHFTDSKIVTGGDDGCVKVWDFAHAPQLLQ* # PASA_UPDATE: g4726.t1, single gene model update, valid-1, status:[pasa:asmbl_7447,status:12], valid-1 NODE_456_length_23402_cov_42.2243 . gene 377 1442 . - . ID=g4726;Name=g4726.t1 NODE_456_length_23402_cov_42.2243 . mRNA 377 1442 . - . ID=g4726.t1;Parent=g4726;Name=g4726.t1 NODE_456_length_23402_cov_42.2243 . five_prime_UTR 1425 1442 . - . ID=g4726.t1.utr5p1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . exon 1383 1442 . - . ID=g4726.t1.exon1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . CDS 1383 1424 . - 0 ID=cds.g4726.t1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . exon 1208 1282 . - . ID=g4726.t1.exon2;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . CDS 1208 1282 . - 0 ID=cds.g4726.t1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . exon 885 1013 . - . ID=g4726.t1.exon3;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . CDS 885 1013 . - 0 ID=cds.g4726.t1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . exon 663 717 . - . ID=g4726.t1.exon4;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . CDS 663 717 . - 0 ID=cds.g4726.t1;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . exon 377 480 . - . ID=g4726.t1.exon5;Parent=g4726.t1 NODE_456_length_23402_cov_42.2243 . CDS 377 480 . - 2 ID=cds.g4726.t1;Parent=g4726.t1 #PROT g4726.t1 g4726 MAARALLNNAFRGKGRWAAPLVGMSIAAPTIAHCTGSVNLDIYEPEDAESTEYVYIEEEVGPLRQTVSAVRQAVWDTSASIKGVAKSIAEKSNELEGKIRQGAKEIIPAEETVFPGMFIVAAAYMGGVVLAKNS* # PASA_UPDATE: g4731.t1, single gene model update, valid-1, status:[pasa:asmbl_7449,status:12], valid-1 NODE_456_length_23402_cov_42.2243 . gene 19649 23164 . - . ID=g4731;Name=g4731.t1 NODE_456_length_23402_cov_42.2243 . mRNA 19649 23164 . - . ID=g4731.t1;Parent=g4731;Name=g4731.t1 NODE_456_length_23402_cov_42.2243 . five_prime_UTR 23129 23164 . - . ID=g4731.t1.utr5p1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 23129 23164 . - . ID=g4731.t1.exon1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 22653 22772 . - . ID=g4731.t1.exon2;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 22653 22772 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 22243 22290 . - . ID=g4731.t1.exon3;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 22243 22290 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 21892 21924 . - . ID=g4731.t1.exon4;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 21892 21924 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 21428 21454 . - . ID=g4731.t1.exon5;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 21428 21454 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 21068 21150 . - . ID=g4731.t1.exon6;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 21068 21150 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 20488 20566 . - . ID=g4731.t1.exon7;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 20488 20566 . - 1 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . exon 19649 20301 . - . ID=g4731.t1.exon8;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . CDS 19681 20301 . - 0 ID=cds.g4731.t1;Parent=g4731.t1 NODE_456_length_23402_cov_42.2243 . three_prime_UTR 19649 19680 . - . ID=g4731.t1.utr3p1;Parent=g4731.t1 #PROT g4731.t1 g4731 MLLLLEFVPYGDLRSFVREIPPQSQGSDVTAGMLASFALQIACGMEYLASMRIVHRDLAARNVMVGQDAFGEYILKVADFGLSKNLRESDYYRKTKTGKVPVKWLALESLTKKVFSEKSDVWSYGILLWEMYTFGETPYPGVPNVEIVSHLTTGHRLGRPRNCDPHTFALMSLCWSLNSAERPSFSDIVRSTLNKMPETQPVQVARSRASTLVRPISGVDFDSTPLDIKLRKLNNYDNDDSNKGGLPVIADGYEEEPHLGTDNFRSGVVDALAVSGDRQALIGRIGRSAGRGSGYLALEDIAMVALESVSADEKTGEVDAPVTAAANTYSHAESIV* # ORIGINAL: g4729.t1 original gene structure, not modified by PASA NODE_456_length_23402_cov_42.2243 AUGUSTUS gene 10062 10591 . + . ID=g4729;Name=g4729.t1 NODE_456_length_23402_cov_42.2243 AUGUSTUS mRNA 10062 10591 . + . ID=g4729.t1;Parent=g4729;Name=g4729.t1 NODE_456_length_23402_cov_42.2243 AUGUSTUS exon 10062 10160 . + . ID=g4729.t1.exon1;Parent=g4729.t1 NODE_456_length_23402_cov_42.2243 AUGUSTUS CDS 10062 10160 . + 0 ID=cds.g4729.t1;Parent=g4729.t1 NODE_456_length_23402_cov_42.2243 AUGUSTUS exon 10337 10591 . + . ID=g4729.t1.exon2;Parent=g4729.t1 NODE_456_length_23402_cov_42.2243 AUGUSTUS CDS 10337 10591 . + 0 ID=cds.g4729.t1;Parent=g4729.t1 #PROT g4729.t1 g4729 MSAANIVSVCGRAASMLWFTRDVTLAAAGDDNEKNPAAASISSALVNILALLAYTHAVLVYVAHEDVGGSNWGGDGGGRDVAVPALQLAACVLTYLHLLYSENDDSEGQGLHSWKDE* # ORIGINAL: g3573.t1 original gene structure, not modified by PASA NODE_1914_length_8562_cov_37.4597 AUGUSTUS gene 6154 8475 . + . ID=g3573;Name=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS mRNA 6154 8475 . + . ID=g3573.t1;Parent=g3573;Name=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 6154 6324 . + . ID=g3573.t1.exon1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 6154 6324 . + 0 ID=cds.g3573.t1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 6499 6780 . + . ID=g3573.t1.exon2;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 6499 6780 . + 0 ID=cds.g3573.t1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 6953 7129 . + . ID=g3573.t1.exon3;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 6953 7129 . + 0 ID=cds.g3573.t1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 7434 7552 . + . ID=g3573.t1.exon4;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 7434 7552 . + 0 ID=cds.g3573.t1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 7746 7898 . + . ID=g3573.t1.exon5;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 7746 7898 . + 1 ID=cds.g3573.t1;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 8187 8475 . + . ID=g3573.t1.exon6;Parent=g3573.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 8187 8475 . + 1 ID=cds.g3573.t1;Parent=g3573.t1 #PROT g3573.t1 g3573 MEILKADYLSACAEVGLKPVPFLVSIIDLSIRNRTELQSITIKGNDARLGGKRITDRDLEAICVALARNQTVKELNLAYNVLTDHGAQTLAILLQKNRFLRSLDVSHNEIGHQGVDFIARELHMNNTLTRLVLNGTRGGTEGALVLASMLQINATLEELDVGNTDIGTNGLIAFATVLNNNHSLKLLNIEAPLLFSHGEETTMHIARMLQVNRGLQKLYLGKHGIKDHGVYLLSQYLLENASLTHLDLRCNKITQDGAKSISGLLEKTRCLQSLNLSANRLEDPGALILSKAVLKNSTLIFLGLDHCGMGDDGLVAIAKAIAGRPRITSFRVWGNKFAFESSQVRHLLCVVDFADGCLGGRWTVLEEKWSSLYWKERPSGLVESFMAQECSFIRVH* # PASA_UPDATE: g3571.t1, single gene model update, valid-1, status:[pasa:asmbl_3001,status:3], valid-1 NODE_1914_length_8562_cov_37.4597 . gene 197 3234 . - . ID=g3571;Name=g3571.t1 NODE_1914_length_8562_cov_37.4597 . mRNA 197 3234 . - . ID=g3571.t1;Parent=g3571;Name=g3571.t1 NODE_1914_length_8562_cov_37.4597 . five_prime_UTR 3081 3234 . - . ID=g3571.t1.utr5p1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 2899 3234 . - . ID=g3571.t1.exon1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 2899 3080 . - 0 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 2608 2731 . - . ID=g3571.t1.exon2;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 2608 2731 . - 1 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 2082 2509 . - . ID=g3571.t1.exon3;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 2082 2509 . - 0 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 1671 1764 . - . ID=g3571.t1.exon4;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 1671 1764 . - 1 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 927 1372 . - . ID=g3571.t1.exon5;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 927 1372 . - 0 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . exon 197 761 . - . ID=g3571.t1.exon6;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . CDS 218 761 . - 1 ID=cds.g3571.t1;Parent=g3571.t1 NODE_1914_length_8562_cov_37.4597 . three_prime_UTR 197 217 . - . ID=g3571.t1.utr3p1;Parent=g3571.t1 #PROT g3571.t1 g3571 MQALWTACQGRMCTRPPSLSLRLSLGRSTQCARDDVRRRCLSTGSALDALKERDLVNDCTSGDLDAVFATRPPVYCGFDPTADTLHVGNLVAIMALIHFRRKGHPVIALVGGATGQIGDPSGRHSERSQLGRLTLETNVAGIDATLRRIFTNATTLFPPDANSDNDKGESIAAAESKRQFVEAVRAARGIGSTGGSHGDILGAEGTGGSGIGNGTPQNDPMVAVVNNLDWFANMSVLDFVGGVGRLFRMTSMLAKESVKARLDSPDGMSYTEFSYQMFQAYDFYYLHRHYGCRVQIGGSDQWGNITAGCELIRRIMAERYADAATPAHSPSTIEVSRQSTLDTQSTATSLSSPSTALLAGAYGVTLPLVTTSTGEKFGKSAGNAVWLHEARTSPYELFQFFMKAEDADVEKYLKMFTFLSVEEIRAIVERHVHSPHLRTAQRTLASHVTRLIHGDGGLHRAERVTAVLFGDASIDGRIDLSPSDVEGLLRNAHVTKVDRRRLPPTDATERTAGAQAVAVTTGTTRTNDAAVASALGDSKVVSLAVDSGLCASRGAARRAVEAGGVYVNNVRVQSATAIVSEGDLFAGGIVVLRMGKANYRVLQFV* # ORIGINAL: g3572.t1 original gene structure, not modified by PASA NODE_1914_length_8562_cov_37.4597 AUGUSTUS gene 4192 5612 . + . ID=g3572;Name=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS mRNA 4192 5612 . + . ID=g3572.t1;Parent=g3572;Name=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 4192 4320 . + . ID=g3572.t1.exon1;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 4192 4320 . + 0 ID=cds.g3572.t1;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 4448 4513 . + . ID=g3572.t1.exon2;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 4448 4513 . + 0 ID=cds.g3572.t1;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 4748 4873 . + . ID=g3572.t1.exon3;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 4748 4873 . + 0 ID=cds.g3572.t1;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 5068 5133 . + . ID=g3572.t1.exon4;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 5068 5133 . + 0 ID=cds.g3572.t1;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS exon 5430 5612 . + . ID=g3572.t1.exon5;Parent=g3572.t1 NODE_1914_length_8562_cov_37.4597 AUGUSTUS CDS 5430 5612 . + 0 ID=cds.g3572.t1;Parent=g3572.t1 #PROT g3572.t1 g3572 MVAKSKAARRTAANSGTEQRRAADTLAIERGILALYSTSSTLQNVEDVLLQHYHEDAEFEDPIVKVFGRADVRTQFLGLRQIFHATPLEHTFVYDYLNDRLIFDAKIEYRIKRIPIPITLHQITTLSLNDQGKIVHHEDCWDFASLIEAIPVPLLGSAYSQLRSGLGSATTYVLRRFQPAAPPSDSRTD* # PASA_UPDATE: g10603.t1, single gene model update, valid-1, status:[pasa:asmbl_3803,status:12],[pasa:asmbl_3804,status:12],[pasa:asmbl_3805,status:12],[pasa:asmbl_3807,status:12],[pasa:asmbl_3808,status:12], valid-1 NODE_2221_length_7189_cov_38.7437 . gene 886 4716 . - . ID=g10603;Name=g10603.t1 NODE_2221_length_7189_cov_38.7437 . mRNA 886 4716 . - . ID=g10603.t1;Parent=g10603;Name=g10603.t1 NODE_2221_length_7189_cov_38.7437 . exon 3181 4716 . - . ID=g10603.t1.exon1;Parent=g10603.t1 NODE_2221_length_7189_cov_38.7437 . CDS 3181 4716 . - 0 ID=cds.g10603.t1;Parent=g10603.t1 NODE_2221_length_7189_cov_38.7437 . exon 886 2833 . - . ID=g10603.t1.exon2;Parent=g10603.t1 NODE_2221_length_7189_cov_38.7437 . CDS 1004 2833 . - 0 ID=cds.g10603.t1;Parent=g10603.t1 NODE_2221_length_7189_cov_38.7437 . three_prime_UTR 886 1003 . - . ID=g10603.t1.utr3p1;Parent=g10603.t1 #PROT g10603.t1 g10603 MASTAAVDDVVKVTARLRPSLKNEKGPAHGTGIRIEGTQLRISLPAAKEETCSFDRVHDEDASTRVVYAQTVAPLVGLLCEGYNTAVLAFGETGSGKSHTLEGPRGSQDGVIQLAIEGLFTMLADRQVKDPSLECRVRIQYYELYNELVSDLLQPQNKDLEFDEDEEVGIVVRGVTSREIRDVGEGVNVVAEGKLARTSVVTDIGPASARATAVCVVELSRAVGDGDPLRSRMMFVDMPGGEKLAEDPTSVRMREGASMNRSILAFGQLVEDLAGAAGNGRGGKGNTPFGLVSMRGLNASMSVGANASVRGLGGGAGGGGGGGGKSGEGGAVYEGSKLTMLLQDVIGGNAVTRVILTLKPTVDPGRTSATVAIARQLSRIRNSPLVNTRAVCSVLRRYRQRIAGLREQVSVLRDTRGAESDGRGATAGEGRTLRDNLDKVRLQEENERVQLRLSELRSKFNEVVASKTELSAALIASEEERLRVSKALVDLQIENNRVAEDGESKNFELVNKVLGLENDVLELEMRCERQERSAEEMRVRLESAEADRRELADEYAVLKGSHVALTKAHHSEVHKGEELGLELLNLVNAKAALLRERDALAAQLDALRTRNDSLLHKVSDGETTHTRREVELGDLRTTVDKVRADMMAKQVELGHRNVQLESQRVDLERQVIEMQRMRDKDVVALRRQHEEELRKSEDIRTAAQKEVNELKVALRRVERRAQDLAADAESAREAKGALERENAALQQHHRELVEEYRARLQRYVRDVSDHLGSMRANGVATVHLQVREAVESMIAEVRQSFAEREREAVEKASQQTERTRALETRVQRIALAYRQLRHRFEDFAGADAEKLALPSEAEVMAGVDVAQGAGGVRGGGVFGGGGGGGADGASMRAALAAAEHDLAEMRRKVADDSRRHRRTLADVEARYSAIVDELRGELEGRVRRMSSEDKARTILQMQKTITELRVAAMTAVSPQAAEELARLREDNDRLVKDARETARGGKFEALKQRLHDFTAQTQHDLEKERSALMVRCTLAEEQLSRMQEHLDKLTAAHRKEISRYKKALAAHAAASGGAGGSSQAAAAGEGDAHARASSHAQSTHQSHAQHDAGAHGHRRSRGERG* # ORIGINAL: g10604.t1 original gene structure, not modified by PASA NODE_2221_length_7189_cov_38.7437 AUGUSTUS gene 5548 6481 . + . ID=g10604;Name=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS mRNA 5548 6481 . + . ID=g10604.t1;Parent=g10604;Name=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS exon 5548 5729 . + . ID=g10604.t1.exon1;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS CDS 5548 5729 . + 0 ID=cds.g10604.t1;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS exon 5908 6026 . + . ID=g10604.t1.exon2;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS CDS 5908 6026 . + 1 ID=cds.g10604.t1;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS exon 6179 6231 . + . ID=g10604.t1.exon3;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS CDS 6179 6231 . + 2 ID=cds.g10604.t1;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS exon 6434 6481 . + . ID=g10604.t1.exon4;Parent=g10604.t1 NODE_2221_length_7189_cov_38.7437 AUGUSTUS CDS 6434 6481 . + 0 ID=cds.g10604.t1;Parent=g10604.t1 #PROT g10604.t1 g10604 MSQPHQLVRHKAGKSTFEVMTHPGTVLKWRKGEEQWANVPFAESIFKNFSKGERANAEELKAAFDTENVEECMKIICQKGAVSENAAERKEKTDKKRNEIVSYIHKYYMNPQTNTPHPSPNKLRSLQLVANGH* # ORIGINAL: g9934.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 13744 15646 . + . ID=g9934;Name=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 13744 15646 . + . ID=g9934.t1;Parent=g9934;Name=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 13744 13908 . + . ID=g9934.t1.exon1;Parent=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 13744 13908 . + 0 ID=cds.g9934.t1;Parent=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 14521 15023 . + . ID=g9934.t1.exon2;Parent=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 14521 15023 . + 0 ID=cds.g9934.t1;Parent=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 15238 15646 . + . ID=g9934.t1.exon3;Parent=g9934.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 15238 15646 . + 1 ID=cds.g9934.t1;Parent=g9934.t1 #PROT g9934.t1 g9934 MSAANSDFLGAKNVPNQKIQFNIKEGEIHMGVGAPGDDLLMHSVKAASKAAVHRLPGDCVYVEDPTYFLAHQVFADHGLKVIPIRTDAEGIVVEDLDAAATVNRSPHHQDIAADAVPSRFNGMVYLVPTFNNPTGRIMSDARRKEVVRLAYQHGLVVMCDDVYELLSYPPSGGTLDVPHRLAAYDTGAGRVVSNCSFSKIFGPGIRLGWFEAQQALLQPLADCGKLASGGALNQFTSGIMTSVMTLGLLDTLVDSLRTVYGARLGALVAALHKDLPEAEFSAPLGGYFLWVRLPEGIDTEKLLSHCRDAHAVAFQPGNRFSVTKSFGNYLRLSFAHYSAEQLTEGIARLSKGYRSLPQ* # PASA_UPDATE: g9941.t1, single gene model update, valid-1, status:[pasa:asmbl_1472,status:12], valid-1 # PASA_UPDATE: g9941.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1471,status:12], valid-1 # PASA_UPDATE: g9941.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1470,status:12], valid-1 # PASA_UPDATE: g9941.t1.3.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1469,status:12], valid-1 NODE_13_length_69504_cov_42.3791 . gene 45579 48804 . - . ID=g9941;Name=g9941.t1 NODE_13_length_69504_cov_42.3791 . mRNA 45579 48802 . - . ID=g9941.t1;Parent=g9941;Name=g9941.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 48739 48802 . - . ID=g9941.t1.utr5p1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 48552 48802 . - . ID=g9941.t1.exon1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 48552 48738 . - 0 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 48353 48435 . - . ID=g9941.t1.exon2;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 48353 48435 . - 2 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 48207 48255 . - . ID=g9941.t1.exon3;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 48207 48255 . - 0 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 47869 48080 . - . ID=g9941.t1.exon4;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 47869 48080 . - 2 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 47455 47677 . - . ID=g9941.t1.exon5;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 47455 47677 . - 0 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 47188 47256 . - . ID=g9941.t1.exon6;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 47188 47256 . - 2 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 46876 47028 . - . ID=g9941.t1.exon7;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 46876 47028 . - 2 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 46566 46694 . - . ID=g9941.t1.exon8;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . CDS 46567 46694 . - 2 ID=cds.g9941.t1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . exon 45579 45752 . - . ID=g9941.t1.exon9;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 46566 46566 . - . ID=g9941.t1.utr3p1;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 45579 45752 . - . ID=g9941.t1.utr3p2;Parent=g9941.t1 NODE_13_length_69504_cov_42.3791 . mRNA 45579 48804 . - . ID=g9941.t1.1.5b6be70a;Parent=g9941;Name=g9941.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 48739 48804 . - . ID=g9941.t1.1.5b6be70a.utr5p1;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48552 48804 . - . ID=g9941.t1.1.5b6be70a.exon1;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48552 48738 . - 0 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48353 48435 . - . ID=g9941.t1.1.5b6be70a.exon2;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48353 48435 . - 2 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48207 48255 . - . ID=g9941.t1.1.5b6be70a.exon3;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48207 48255 . - 0 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47869 48080 . - . ID=g9941.t1.1.5b6be70a.exon4;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47869 48080 . - 2 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47524 47677 . - . ID=g9941.t1.1.5b6be70a.exon5;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47524 47677 . - 0 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47188 47256 . - . ID=g9941.t1.1.5b6be70a.exon6;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47188 47256 . - 2 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46876 47028 . - . ID=g9941.t1.1.5b6be70a.exon7;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46876 47028 . - 2 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46566 46694 . - . ID=g9941.t1.1.5b6be70a.exon8;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46567 46694 . - 2 ID=cds.g9941.t1.1.5b6be70a;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 45579 45752 . - . ID=g9941.t1.1.5b6be70a.exon9;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 46566 46566 . - . ID=g9941.t1.1.5b6be70a.utr3p1;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 45579 45752 . - . ID=g9941.t1.1.5b6be70a.utr3p2;Parent=g9941.t1.1.5b6be70a NODE_13_length_69504_cov_42.3791 . mRNA 45924 48802 . - . ID=g9941.t1.2.5b6be70a;Parent=g9941;Name=g9941.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 48739 48802 . - . ID=g9941.t1.2.5b6be70a.utr5p1;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48552 48802 . - . ID=g9941.t1.2.5b6be70a.exon1;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48552 48738 . - 0 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48353 48435 . - . ID=g9941.t1.2.5b6be70a.exon2;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48353 48435 . - 2 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48207 48255 . - . ID=g9941.t1.2.5b6be70a.exon3;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48207 48255 . - 0 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47869 48080 . - . ID=g9941.t1.2.5b6be70a.exon4;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47869 48080 . - 2 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47524 47677 . - . ID=g9941.t1.2.5b6be70a.exon5;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47524 47677 . - 0 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47188 47256 . - . ID=g9941.t1.2.5b6be70a.exon6;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47188 47256 . - 2 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46876 47028 . - . ID=g9941.t1.2.5b6be70a.exon7;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46876 47028 . - 2 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46566 46694 . - . ID=g9941.t1.2.5b6be70a.exon8;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46567 46694 . - 2 ID=cds.g9941.t1.2.5b6be70a;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 45924 46425 . - . ID=g9941.t1.2.5b6be70a.exon9;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 46566 46566 . - . ID=g9941.t1.2.5b6be70a.utr3p1;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 45924 46425 . - . ID=g9941.t1.2.5b6be70a.utr3p2;Parent=g9941.t1.2.5b6be70a NODE_13_length_69504_cov_42.3791 . mRNA 45924 48804 . - . ID=g9941.t1.3.5b6be70a;Parent=g9941;Name=g9941.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 48739 48804 . - . ID=g9941.t1.3.5b6be70a.utr5p1;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48552 48804 . - . ID=g9941.t1.3.5b6be70a.exon1;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48552 48738 . - 0 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48353 48435 . - . ID=g9941.t1.3.5b6be70a.exon2;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48353 48435 . - 2 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 48207 48255 . - . ID=g9941.t1.3.5b6be70a.exon3;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 48207 48255 . - 0 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47869 48080 . - . ID=g9941.t1.3.5b6be70a.exon4;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47869 48080 . - 2 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47455 47677 . - . ID=g9941.t1.3.5b6be70a.exon5;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47455 47677 . - 0 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 47188 47256 . - . ID=g9941.t1.3.5b6be70a.exon6;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 47188 47256 . - 2 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46876 47028 . - . ID=g9941.t1.3.5b6be70a.exon7;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46876 47028 . - 2 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 46566 46694 . - . ID=g9941.t1.3.5b6be70a.exon8;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . CDS 46567 46694 . - 2 ID=cds.g9941.t1.3.5b6be70a;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . exon 45924 46425 . - . ID=g9941.t1.3.5b6be70a.exon9;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 46566 46566 . - . ID=g9941.t1.3.5b6be70a.utr3p1;Parent=g9941.t1.3.5b6be70a NODE_13_length_69504_cov_42.3791 . three_prime_UTR 45924 46425 . - . ID=g9941.t1.3.5b6be70a.utr3p2;Parent=g9941.t1.3.5b6be70a #PROT g9941.t1 g9941 MAENVVMNGNGEVLSKEADTIKLFVGQIPRTLDEQSLRAIFEEYGKVYELTILKDRHTGMHKGCGFLTYCQRASALLAMDALHEKKTLPGMSHAMQVKPADSEEKAVENRKLFIGMIPKTSMEEEVKKIFEPYGEVEDLTVLRMHDGTSKGCAFLKYARRESAVTAIATLNGRVTLDGAAQPIVVKFADTEKEKMQKKMQTGRPPMGFPGAMGYPYQQYPGFYPPFPAGGAMGMGGMDPLSQAYAGVQQFAAAYPGAYGQGFPQQGAGGVPKAQESAGPEGANLFIYHLPPEFLDNDLAATFAPFGNVISAKVFIDRLTGQSKCFGFVSYDNPGSAAAAIQAMNGFQIGNKRLKVQHKRPRDASRPY* #PROT g9941.t1.1.5b6be70a g9941 MAENVVMNGNGEVLSKEADTIKLFVGQIPRTLDEQSLRAIFEEYGKVYELTILKDRHTGMHKGCGFLTYCQRASALLAMDALHEKKTLPGMSHAMQVKPADSEEKAVENRKLFIGMIPKTSMEEEVKKIFEPYGEVEDLTVLRMHDGTSKGCAFLKYARRESAVTAIATLNGRVTLDGAAQPIVVKFADTEKEKMQKKMQTGRPPMGFPGAMGYPYQQYPGFYPPFPAAAYPGAYGQGFPQQGAGGVPKAQESAGPEGANLFIYHLPPEFLDNDLAATFAPFGNVISAKVFIDRLTGQSKCFGFVSYDNPGSAAAAIQAMNGFQIGNKRLKVQHKRPRDASRPY* #PROT g9941.t1.2.5b6be70a g9941 MAENVVMNGNGEVLSKEADTIKLFVGQIPRTLDEQSLRAIFEEYGKVYELTILKDRHTGMHKGCGFLTYCQRASALLAMDALHEKKTLPGMSHAMQVKPADSEEKAVENRKLFIGMIPKTSMEEEVKKIFEPYGEVEDLTVLRMHDGTSKGCAFLKYARRESAVTAIATLNGRVTLDGAAQPIVVKFADTEKEKMQKKMQTGRPPMGFPGAMGYPYQQYPGFYPPFPAAAYPGAYGQGFPQQGAGGVPKAQESAGPEGANLFIYHLPPEFLDNDLAATFAPFGNVISAKVFIDRLTGQSKCFGFVSYDNPGSAAAAIQAMNGFQIGNKRLKVQHKRPRDASRPY* #PROT g9941.t1.3.5b6be70a g9941 MAENVVMNGNGEVLSKEADTIKLFVGQIPRTLDEQSLRAIFEEYGKVYELTILKDRHTGMHKGCGFLTYCQRASALLAMDALHEKKTLPGMSHAMQVKPADSEEKAVENRKLFIGMIPKTSMEEEVKKIFEPYGEVEDLTVLRMHDGTSKGCAFLKYARRESAVTAIATLNGRVTLDGAAQPIVVKFADTEKEKMQKKMQTGRPPMGFPGAMGYPYQQYPGFYPPFPAGGAMGMGGMDPLSQAYAGVQQFAAAYPGAYGQGFPQQGAGGVPKAQESAGPEGANLFIYHLPPEFLDNDLAATFAPFGNVISAKVFIDRLTGQSKCFGFVSYDNPGSAAAAIQAMNGFQIGNKRLKVQHKRPRDASRPY* # ORIGINAL: g9947.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 61512 63748 . - . ID=g9947;Name=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 61512 63748 . - . ID=g9947.t1;Parent=g9947;Name=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 63482 63748 . - . ID=g9947.t1.exon1;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 63482 63748 . - 0 ID=cds.g9947.t1;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 62971 63216 . - . ID=g9947.t1.exon2;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 62971 63216 . - 0 ID=cds.g9947.t1;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 62539 62742 . - . ID=g9947.t1.exon3;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 62539 62742 . - 0 ID=cds.g9947.t1;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 62031 62208 . - . ID=g9947.t1.exon4;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 62031 62208 . - 0 ID=cds.g9947.t1;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 61512 61777 . - . ID=g9947.t1.exon5;Parent=g9947.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 61512 61777 . - 2 ID=cds.g9947.t1;Parent=g9947.t1 #PROT g9947.t1 g9947 MKNSRATTFTLGDRGTLLSELESAVIVPAAAKQKQQKFAYESLFRCVHFVLVDNVASEAHFLRDFFYCRAPELQELFDAIFTRTIQMYLKHAETSFLTCFDAIGMMLCLRILHHYRTRLGKDKIACLDDYFERVGSAYIWPRLKAVLEANSESLRNADIHRLGSLDIHPHYVTRRYAEFAAALVFVNEGYNNVHVAECLGTMRSEMENLILRMAAEFPTRKEQLIFLINNYDIILSVLHERTTVDAMETELFQAVLNARITEFVEEELAPFFGGMIGFVKEWEPLVEKSKADQAKFDQRKLEQIVRNFGSDWKKAIDAINGDITRSFDNFNNGTTIRQSVLTQLIVYYQRFQNLLNQPPFKMLPIRNELINIHNVMVEVKKHKGPI* # ORIGINAL: g9938.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 25689 34180 . + . ID=g9938;Name=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 25689 34180 . + . ID=g9938.t1;Parent=g9938;Name=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 25689 27041 . + . ID=g9938.t1.exon1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 25689 27041 . + 0 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 27255 27455 . + . ID=g9938.t1.exon2;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 27255 27455 . + 0 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 27657 27853 . + . ID=g9938.t1.exon3;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 27657 27853 . + 0 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 28019 32608 . + . ID=g9938.t1.exon4;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 28019 32608 . + 1 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 32947 33087 . + . ID=g9938.t1.exon5;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 32947 33087 . + 1 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 33302 33524 . + . ID=g9938.t1.exon6;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 33302 33524 . + 1 ID=cds.g9938.t1;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 33761 34180 . + . ID=g9938.t1.exon7;Parent=g9938.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 33761 34180 . + 0 ID=cds.g9938.t1;Parent=g9938.t1 #PROT g9938.t1 g9938 MKTRQSVRNRQKCKASVATAASLLRSARDSTAAKYSTPKHTPKASAAKATGAGRKRKAPVVAPESDGESDQNGEDDEEIGEPKPPVVVASKAARKRRTPQVQADVILEGPNGDGPSTASDVQPKRAPTRKRNAEAAELPSSAPPPHAASSSGAAKKRKRDTASGAVHPAHAISPPTNAQLAAGIAPQALVPADGGVHYRRPTIDVAPLGGDGRAIDSISVTRLQSQKDAPLVGKKRREEEIRAKKAAEMVAKAVPSMPSRLHFDPDDQRACCTGCASLAIFDAIRTSNLQVIESLVADKKGVSTVNPRLAPDAFVYALTMAIRGGDLPVVRALTATGIDQGRSPVPQNSIARENDTGAVGMNTYSHRVRKVNVARGGKEGNTALIDTSRGDPWEPPADVTQQAFRRAVQTLPDTDAALQCVEYLLLASHTNFKRYVEYYGVYDACESGNKRLLSHLVRAIGGGGPEGPLMNSSSGFNRLHVEVLSDSPLSPYKRISVPKKATSNNAITPVHFAAINPNPSYIRELFATLNSNDGDTLTDRRGRRAVHFAAACDGVGPLEYLLSRNNDLGKADQAGILPIHLCAKHGKVHNIAVFARFYGGSLAAINDRGGKNACHYAAHYGHAATLAELVKYGSPFDSAEKDKKITPLMEASRMGNVACVAVLLAAGANINGRDKAQRTALHWAAKNGHSDIVVRLLRQGSDPDGGDSSGNGPLHYAAAFGHLATVELLVSYGGASPASLSAWKTSPLSIAFIKGHMRVVDYLLRQPGSRLDLRDTEGRSLLHHALLASGTAGADATNGGDGNDGNETTIRQVEFLLTRGASPAIADSVQDTPLHVLAWCASDKAAKATTVAVGGGGGSGSSDAAETVADEPVVHWTLRAAKMLVDAGATLDACNSEGKTPLMIAIESGSHRLAEWFLRRGASIRGRQSGGVNALHSIVHAAATHDVGPLWAAASSRDAAELEACAAAVDKNGFTPLLLALLTANPAKTAPDAKADVGGVKAGVVASTLMDVEKLRVFTTEYIDKCKPNLNCAVIALSESNEKAEPVPVGAAPAVVGGDSGGAASKEVEDEGKGKGAMDTEGDGDHHEDESDGENAGNKDASEKAAFTTGEEDADKSGEEDANKSGEEADDNGERAADVVMKDADPAAGTSASAGGAGVVISSVAAAATGAVGDAAKPPPEHVGRTALHFAAYRATCAAIVAVLCARGADANRRDARGLTPIAQAVFSGSHENVKALLDGGADPNGCVCGNARRTPLMVAASKGTTRAVRILLEAGADASAVDENGQTALILAVLQGLKDNRQGFAVERAIVAYGGDVNTKDKSGCAVLHYAFRPSEFEKTSSVAMASRGFHGSFKARDANAPNADPIETIIDLCSLDGMDVNARDWRGRTALHYAAECGAVISTMYLLQHGADINATDALGNGPLQLALANGHTSYAAVLINKGADIRPHVTVTVEGAGDNSGGQAPKSLSTFEFVITKEMMGICYLLMDLGIDLLHATRDALSCAKFQVVVAVLDKKPPAAARAVDANGRGMFHILASCNFLGRSSNNSPDVSRDFSEMYAPQICAALEEREVDVFAKDNRGRTALHAAAASGYTELCEYFIRRGLTLTDEDEKGRSVLAHALASKRDTHGTVRALIARGADVNALGRGSAPSLLLAVRKNDLPTVRTLVDAGANPNLKSPLDGRTALLEAASLDRLDAAKLLIDMSQQGAAALALQFGAVDNCGRTALHWAVKGHDAHVTHEDTDLLRTLASARVPIDARDMDGNSAADYAKLQASGKMLTCLRELGATGADAVPSADILGRISAASDALFASAPALGHVDVVADSRAEKSRQEAERVEAYRRALSTASGEVNPVDPLSGLRLTGKVVVGGDGAPLDATLHKVDVRMGYHGQNDFYRMQVIHVTTQDLFILWTRWGRVGETGMHQRTPFGTAQEAEIEFGKVFRSKTGNTWQSRDTSDPKDGKYARVATSDMTDAGAQAAKNDGPLNKFPKKAIALPTSLDARVVKLLRIVSNRKAIVNATHNERAFVLGKVTDENITDAFGVLKEISVVVDQCAAADAALDLASITACREKMVQLGQRFYSIIRHNAWELGSAWTRARVAEKAAMLIRMSDLQAGMKIHLGAEYRSSDTNPYEYCYRALGCDIVPLNSGPERDLVERYFALSAGDSPSVEIADVFAVRRRGEADRFAPHATEPNQMLLWHGSPVSNYLGLLSEGLCIAPPNVPISGAMFGSGIYFADAFAKSAGYMRMGNGGNQETSNHGVALLCRVALGDYIEAASVDTNIAPVAMDRPSTKGVGDMQPHPRNAVVTVVDGTTVPLGPVVKVDRAASVPRWGNYALNYNEFVVYDQNRVNIRYAVLFRSKNYKPKKKAQ* # PASA_UPDATE: g9937.t1, single gene model update, valid-1, status:[pasa:asmbl_1467,status:3], valid-1 NODE_13_length_69504_cov_42.3791 . gene 22377 25194 . - . ID=g9937;Name=g9937.t1 NODE_13_length_69504_cov_42.3791 . mRNA 22377 25194 . - . ID=g9937.t1;Parent=g9937;Name=g9937.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 25124 25194 . - . ID=g9937.t1.utr5p1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 24489 25194 . - . ID=g9937.t1.exon1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 24489 25123 . - 0 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 24305 24371 . - . ID=g9937.t1.exon2;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 24305 24371 . - 1 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 23827 24131 . - . ID=g9937.t1.exon3;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 23827 24131 . - 0 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 23520 23595 . - . ID=g9937.t1.exon4;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 23520 23595 . - 1 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 23233 23392 . - . ID=g9937.t1.exon5;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 23233 23392 . - 0 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 22996 23051 . - . ID=g9937.t1.exon6;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 22996 23051 . - 2 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . exon 22377 22775 . - . ID=g9937.t1.exon7;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . CDS 22686 22775 . - 0 ID=cds.g9937.t1;Parent=g9937.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 22377 22685 . - . ID=g9937.t1.utr3p1;Parent=g9937.t1 #PROT g9937.t1 g9937 MGTRVWPPQQAATTGSPSQMRPPAPSSPSSRASTVASSSPSSTRASFASSPQLTPGASGLQRPPPPATNATAPVHSSPSSPPMAAPARPSRLPQSPMTSRPAPPSTVDRESSPASSPHPTATRPPAPARPSLPENPVNSQHASAPPRPKLPAQPAVDSTAVAPSSSSYAASSEATTPGKITLPPPRARQVAEQPKAALDNASSSQRSHASDDIDYPHVRGYEVKTDAYTKEKIVLYIIEIAGQNVYRRLAETREFHGKVSKLLAKMNAGEPPAFPVVNVGVFGSMEKAVADLDEYFRLMANLPEEVLTSSTVADFFRATPKDLQEREAGAAKAAKRNDPAAILAIHVVDCKKIRDPGEKFYAYGLEVSHGDGSTVIVWRRYREFFDFVGRLKEIYPTESGSLDDALPPRKFFGRSQVKDVASQRVPDLDKFMQYVMSNELTSDCQQLRYFLHPTFNNIVPPP* # ORIGINAL: g9945.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 57667 58353 . - . ID=g9945;Name=g9945.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 57667 58353 . - . ID=g9945.t1;Parent=g9945;Name=g9945.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 57667 58353 . - . ID=g9945.t1.exon1;Parent=g9945.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 57667 58353 . - 0 ID=cds.g9945.t1;Parent=g9945.t1 #PROT g9945.t1 g9945 MFNGIHTLDLHECNRVVDVSTLGGAHTLNLSACYGLVDVSALGGVHTLHLRFCVGVCDVSALGGVHALDISICGGVFVSYLGGVHTLSMSGCYRVEDVSALGGVHTLDLSGCLGVVDVSALGGVHTLDLSGCRVVDVSALSGVRALNLSRCSGVVDVSALGSVHNLNLTGCLGVVDVSALGGVHTLILAECYGVLDVSNLGGVYALDLSGCYGVVDVSSLTKIHTLRI* # PASA_UPDATE: g9940.t1, single gene model update, valid-1, status:[pasa:asmbl_1468,status:3], valid-1 NODE_13_length_69504_cov_42.3791 . gene 39593 44961 . - . ID=g9940;Name=g9940.t1 NODE_13_length_69504_cov_42.3791 . mRNA 39593 44961 . - . ID=g9940.t1;Parent=g9940;Name=g9940.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 44858 44961 . - . ID=g9940.t1.utr5p1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 44794 44961 . - . ID=g9940.t1.exon1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 44794 44857 . - 0 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 44595 44687 . - . ID=g9940.t1.exon2;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 44595 44687 . - 2 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 43864 44453 . - . ID=g9940.t1.exon3;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 43864 44453 . - 2 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 43501 43568 . - . ID=g9940.t1.exon4;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 43501 43568 . - 0 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 43017 43246 . - . ID=g9940.t1.exon5;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 43017 43246 . - 1 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 41917 42782 . - . ID=g9940.t1.exon6;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 41917 42782 . - 2 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 41601 41702 . - . ID=g9940.t1.exon7;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 41601 41702 . - 0 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 41138 41331 . - . ID=g9940.t1.exon8;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 41138 41331 . - 0 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 40850 40986 . - . ID=g9940.t1.exon9;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 40850 40986 . - 1 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 40199 40638 . - . ID=g9940.t1.exon10;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 40199 40638 . - 2 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . exon 39593 40023 . - . ID=g9940.t1.exon11;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . CDS 39751 40023 . - 0 ID=cds.g9940.t1;Parent=g9940.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 39593 39750 . - . ID=g9940.t1.utr3p1;Parent=g9940.t1 #PROT g9940.t1 g9940 MATTKTFSFRNSKDKVVGLYLGSRTIYDGPNQVVDPIEGVIKINDPSTLEGKVLYARVTCDYIFEDQDWEIHRETLYEKVLTLHPSASEECQPNGAQRALIKKIGDKCFPFVVTLPSNSPASVILKPEMYYEGHQIGISWTVSAYLMSGSLGQKTSVVNLPFQKINFCPAARDMPAPTAEGTKSFMFDSSRPLRLRASLEKDVFMHGEPIVVKVDIENMSKKEVYAIKVSVKQIAEIRIGAKKEKLKSQVALLESTRGCPVKKHDTFVYSYSVVPKVMAQETHHVAQEMKLNMADASKLAASTRLTHSKMDEGSGVSITYYLNVHAVVAMGADLITKIPFTISYPEPVKAAPKETKPRSESQSASQAPAVQKEPEVDLLIDFDSDPLPTQPALIPGPGMAGGMPTGEANGIDAAIAMVRATDRELLRAQSLAANGQLEMFPTSSSEGVGADVPRFVLGTKQAGSTIGRLLADASQLRPGDASTAVVVIGSAIASASALRSLADTAVAIAKSVTDDTAQQDMFISVHDILAKGALMLESAKAQMSAPLNERRSELSSLGEYLSQAFPALINALPGPRECVYACDTIATCTSHLDSTFKIPTKGDLAAAVDALHYHAQALSEAFKAVGQAALGPTAMSQLAQAARSYEAAIPKVIGCGQNVIIALPDVDQRKQLISLLKAVAQTSINLLNVAKATIIEPSAENRQHLEVSGSAVVESMRAILGITHHLKQTAASPAAKPATAVPEALQRIKSQPARRDSFEEFIQIRQGGAVPSLPPVSEGSNELSKQYAEADAKLANAKKKVDLVRKGLIDSRNKPRRRSIIVNQPILPGQTTVLDTMLPIVNSVSNLIGHARRRVNELGLLGQAFHAANTEHLRKDKSWAEGLAKSSMDLSSTIATLVLTADNVSNGEEEVSALVQAAQDVASSAADLVNASQVQESVNSDSQHDVEVASRSVQQAADNLASSVDAAVRIRAQEKATPGAAVSAPELERELTAMKLEEEVNNTQRKKFAARRGSAWEY* # PASA_UPDATE: g9943.t1, single gene model update, valid-1, status:[pasa:asmbl_1474,status:12], valid-1 NODE_13_length_69504_cov_42.3791 . gene 52191 53989 . - . ID=g9943;Name=g9943.t1 NODE_13_length_69504_cov_42.3791 . mRNA 52191 53989 . - . ID=g9943.t1;Parent=g9943;Name=g9943.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 53810 53989 . - . ID=g9943.t1.utr5p1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 53526 53989 . - . ID=g9943.t1.exon1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 53526 53809 . - 0 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 53321 53417 . - . ID=g9943.t1.exon2;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 53321 53417 . - 1 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 53179 53232 . - . ID=g9943.t1.exon3;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 53179 53232 . - 0 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 53050 53078 . - . ID=g9943.t1.exon4;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 53050 53078 . - 0 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 52835 52954 . - . ID=g9943.t1.exon5;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 52835 52954 . - 1 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . exon 52191 52723 . - . ID=g9943.t1.exon6;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . CDS 52498 52723 . - 1 ID=cds.g9943.t1;Parent=g9943.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 52191 52497 . - . ID=g9943.t1.utr3p1;Parent=g9943.t1 #PROT g9943.t1 g9943 MEERRLRLLTTRERKVKVLQKAFSASTLKERKNNKDARKDKKAATRKKANMVLTATMPTVNAERELLRATKPAPEKRKYTPVVSKNELVYTNCYCEENVYKLCQRLEAHDASLAEWAVVFISNPSQTVAIWQQKSAPIPNAPVVWDYHVILLHVRPHKKTFVYDFDSRLPFPCSWDLYSHMSFRDQTAIKDSYRSFFRVVYARDYLRTFASDRTHMLNESGEYVKPPPHYSPIKGCDAVDDMNLPRFINMTDRFVGDVVSFETMNERFS* # PASA_UPDATE: g9939.t1, single gene model update, valid-1, status:[pasa:asmbl_1478,status:3], valid-1 NODE_13_length_69504_cov_42.3791 . gene 36271 39522 . + . ID=g9939;Name=g9939.t1 NODE_13_length_69504_cov_42.3791 . mRNA 36271 39522 . + . ID=g9939.t1;Parent=g9939;Name=g9939.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 36271 36477 . + . ID=g9939.t1.utr5p1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 36271 36532 . + . ID=g9939.t1.exon1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 36478 36532 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 36648 36829 . + . ID=g9939.t1.exon2;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 36648 36829 . + 2 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 36957 37070 . + . ID=g9939.t1.exon3;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 36957 37070 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 37255 37758 . + . ID=g9939.t1.exon4;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 37255 37758 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 37944 38062 . + . ID=g9939.t1.exon5;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 37944 38062 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 38224 38416 . + . ID=g9939.t1.exon6;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 38224 38416 . + 1 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 38606 38770 . + . ID=g9939.t1.exon7;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 38606 38770 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . exon 38964 39522 . + . ID=g9939.t1.exon8;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . CDS 38964 39218 . + 0 ID=cds.g9939.t1;Parent=g9939.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 39219 39522 . + . ID=g9939.t1.utr3p1;Parent=g9939.t1 #PROT g9939.t1 g9939 MSLVQHGRRAGVVSKRGKKTFAQPYCNEMTAEVEHIATYVLHTDPTQVAVLDENDIRRIQDELNNYSAETKKMLADKAERERLRNMSKERAKNWENTIEGQRLKKLHAREERHAREEAERMKLDIEEARLQSEKRKDAIERAKRLQYSQVDRVRQLHSGLVLSEVLAERDAQLEQQRLRAEREKRRTLEERAQIDALTENELLKEETNLVRRRDRNMTVADFLKSQIKEHTEVDHQHKTQAQLEAEKVLRDVEEHKAEQARLLAQRRQKAIELHEDGLRMKQLKLKEEEALVKVAEAEALKLKEYHAGKEKLVKIRKTRDSERDRARQAFKQRILDHQMALMNTRKAEEDARLESNAAAAEVRRMAREQAEAEKRQRDIEAISEHMRQTVREHEDARQRQIEMDKVTLAEMRKEGDEARKDEAERRRRNLLTGRELQKHYEGQMDFRNETLTKEQQERLDFDRFVADKMKEEEAQFQSYAREVINEWEDAGRNTIPMRKAAETKQIPQRHNASIDTRRRLGFIQTAHN* # ORIGINAL: g9944.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 54576 57214 . + . ID=g9944;Name=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 54576 57214 . + . ID=g9944.t1;Parent=g9944;Name=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 54576 54636 . + . ID=g9944.t1.exon1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 54576 54636 . + 0 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 54723 54943 . + . ID=g9944.t1.exon2;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 54723 54943 . + 2 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 55128 55211 . + . ID=g9944.t1.exon3;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 55128 55211 . + 0 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 55333 55468 . + . ID=g9944.t1.exon4;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 55333 55468 . + 0 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 55745 55893 . + . ID=g9944.t1.exon5;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 55745 55893 . + 2 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 56062 56221 . + . ID=g9944.t1.exon6;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 56062 56221 . + 0 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 56325 56404 . + . ID=g9944.t1.exon7;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 56325 56404 . + 2 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 56586 56641 . + . ID=g9944.t1.exon8;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 56586 56641 . + 0 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 56800 56943 . + . ID=g9944.t1.exon9;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 56800 56943 . + 1 ID=cds.g9944.t1;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 57103 57214 . + . ID=g9944.t1.exon10;Parent=g9944.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 57103 57214 . + 1 ID=cds.g9944.t1;Parent=g9944.t1 #PROT g9944.t1 g9944 MLGNEECDAPPAVAPVVIEKDASDSSCEASDAANTDEGDAHAEESAFTQDDYFKHMKLRKIVKENHSQRISHLQLNLTSGVDSKNVLLSVGSNQASVYDNEHVGEHLDIVSNFCNENSPDVELQTLLCGTWVPSDIDAVFAVGGVDKCIHVCSVTRGEQLCELEGHKSPVVAIIANPVRRGLLLSLGRDGSGILWNVAPGCAERLVARLALTDASAAAFDTTGNTLAVGTNKGTILLFSVAALLEKAASSRDDFKASFAESSVKLHTGAIDFIKYTSDGCAVSKSAANLVLWDSNGKVVRKVTAKAASEDSQIDISFDGRYACVGSQRGTVSIVDLTSGKEVATLKHQKLKSAITACCFCSDLRQVLCATKEGYILRYDYVSPQQWAEWTKLARDLNGAE* # ORIGINAL: g9948.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 63939 65835 . - . ID=g9948;Name=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 63939 65835 . - . ID=g9948.t1;Parent=g9948;Name=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 65734 65835 . - . ID=g9948.t1.exon1;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 65734 65835 . - 0 ID=cds.g9948.t1;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 65332 65577 . - . ID=g9948.t1.exon2;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 65332 65577 . - 0 ID=cds.g9948.t1;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 64729 65196 . - . ID=g9948.t1.exon3;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 64729 65196 . - 0 ID=cds.g9948.t1;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 64400 64554 . - . ID=g9948.t1.exon4;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 64400 64554 . - 0 ID=cds.g9948.t1;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 63939 64098 . - . ID=g9948.t1.exon5;Parent=g9948.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 63939 64098 . - 1 ID=cds.g9948.t1;Parent=g9948.t1 #PROT g9948.t1 g9948 MSSQPRQVGPAGPASASREGIAKDSGKIDAKGAEVRKATAAKPPRDDAEGRDAKDGKKDMGDSKKDKARGEDDDGDDLDLDLDNLDLTTEDIDFDEVDGHIRENLEDDILKDALAKDVDLRVFAREIRVDLRKVERSSIQDYINEAGNIARLHSQIHVCDKILQTMEEMLGAFQEDLGNISSEIQTLQDQSLSMNVKLKNRKIVQNRLSSFLEQIALSPELVASICDGEVNDTYIDNLITLSEKIAFVKQHSSNKSLACEDVEPEYDKLLSKATDKVRDFLVSRIHALRKPMTNYQVAQQNLIRFKYLNQFMMERNPAIAKEIRLSYVETTSKMYYSLCKQYMQNVLKLQVEESPDKDDLLGVEDSVKKDIRNRLM* # PASA_UPDATE: g9930.t1, single gene model update, valid-1, status:[pasa:asmbl_1477,status:12], valid-1 NODE_13_length_69504_cov_42.3791 . gene 239 2885 . + . ID=g9930;Name=g9930.t1 NODE_13_length_69504_cov_42.3791 . mRNA 239 2885 . + . ID=g9930.t1;Parent=g9930;Name=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 239 323 . + . ID=g9930.t1.exon1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 239 323 . + 0 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 482 576 . + . ID=g9930.t1.exon2;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 482 576 . + 2 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 693 1091 . + . ID=g9930.t1.exon3;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 693 1091 . + 0 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 1215 1297 . + . ID=g9930.t1.exon4;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 1215 1297 . + 0 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 1499 1697 . + . ID=g9930.t1.exon5;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 1499 1697 . + 1 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 1905 2116 . + . ID=g9930.t1.exon6;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 1905 2116 . + 0 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 2346 2513 . + . ID=g9930.t1.exon7;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 2346 2513 . + 1 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . exon 2757 2885 . + . ID=g9930.t1.exon8;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . CDS 2757 2820 . + 1 ID=cds.g9930.t1;Parent=g9930.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 2821 2885 . + . ID=g9930.t1.utr3p1;Parent=g9930.t1 #PROT g9930.t1 g9930 MSILNIHAREILDSRGNPTVEVDLTTEKGLFRAAVPSGASTGIHEALELRDNDKSRYLGKGVLTAVKNVNERIKTALLAKNFTVLQQEEIDDFLIALDGTDNKGSLGANAILGVSLAVCKAGAAHKGVPLYRHIADLAGIKEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAKSFSEAMRMGAETYHHLKAVIKSKYGQDATNVGDEGGFAPNIQDNREGLELLKTAIEKAGYTGKIQIGMDCAASEFCKEGSMYDLDFKNPNSDKSKWLTGDQLADLYRQFVHDYSIVSIEDPFDQDDWDTYTKLTASVKVQIVADDLTVTNPKRIQTAIDKKSANALLLKVNQIGSVTESIKACNLARNAGWGVMVSHRSGETEDTFIADLVVGLGVGQIKTGAPCRSERLAKYNQILRIEEELGASGRFAGESFRHPQ* # PASA_UPDATE: g9933.t1, single gene model update, valid-1, status:[pasa:asmbl_1466,status:12], valid-1 NODE_13_length_69504_cov_42.3791 . gene 10258 13384 . - . ID=g9933;Name=g9933.t1 NODE_13_length_69504_cov_42.3791 . mRNA 10258 13384 . - . ID=g9933.t1;Parent=g9933;Name=g9933.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 13375 13384 . - . ID=g9933.t1.utr5p1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 13335 13384 . - . ID=g9933.t1.exon1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 13335 13374 . - 0 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 12953 13143 . - . ID=g9933.t1.exon2;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 12953 13143 . - 2 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 12458 12692 . - . ID=g9933.t1.exon3;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 12458 12692 . - 0 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 11987 12098 . - . ID=g9933.t1.exon4;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 11987 12098 . - 2 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 11559 11728 . - . ID=g9933.t1.exon5;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 11559 11728 . - 1 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 11211 11249 . - . ID=g9933.t1.exon6;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 11211 11249 . - 2 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 10772 10866 . - . ID=g9933.t1.exon7;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 10772 10866 . - 2 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . exon 10258 10539 . - . ID=g9933.t1.exon8;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . CDS 10366 10539 . - 0 ID=cds.g9933.t1;Parent=g9933.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 10258 10365 . - . ID=g9933.t1.utr3p1;Parent=g9933.t1 #PROT g9933.t1 g9933 MAGVDGLTGVATIEKDTNGDVLWTWCFPTCDARLRDVLVAKSGLEENSLPTDFLFGKLDSTWYYIFNASGQFAKLPKVRAFSVVMLSKVYNPEKYASLGKTLSSLYAETGDTGRIMEGYLAVMTRGQFDSKSPTAGKFVDAEHDVRKAYIAGSLKDVVNQFGESSILIFTAVALKKRVAVYSPSVDSLLKLMRAFPLFAWHRQDWGMLRPYAGLSDAELDDLRSASHYCAGFTDAAVGNRDDVYDVFVNAADGTVAVAPQAKEFFVMGKIHKDFAQVLIRGAEDPDVTDQALVKTLAIKTKELLGNLESIGTADASGKVIISPDEFKSKNFPQNVQSFLWNFAKTEGLARY* # ORIGINAL: g9932.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 5564 9528 . + . ID=g9932;Name=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 5564 9528 . + . ID=g9932.t1;Parent=g9932;Name=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 5564 7056 . + . ID=g9932.t1.exon1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 5564 7056 . + 0 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 7447 7632 . + . ID=g9932.t1.exon2;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 7447 7632 . + 1 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 7802 7856 . + . ID=g9932.t1.exon3;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 7802 7856 . + 1 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 8443 8514 . + . ID=g9932.t1.exon4;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 8443 8514 . + 0 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 8814 8938 . + . ID=g9932.t1.exon5;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 8814 8938 . + 0 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 9077 9175 . + . ID=g9932.t1.exon6;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 9077 9175 . + 1 ID=cds.g9932.t1;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 9300 9528 . + . ID=g9932.t1.exon7;Parent=g9932.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 9300 9528 . + 1 ID=cds.g9932.t1;Parent=g9932.t1 #PROT g9932.t1 g9932 MRGGKQGQRSGRLKLKGESRGGGGRGGRGGRGGRGGRGGRGAGRSRGRGRGGASRGDGEREEETSGAHTGTGFSRGRGRAPRPERPETRPKESVVAEEDDDEEDVEGMEEKDAYSLLVGSLKLSGRHAHAAKRRRMEEEGVEEEDIVRKTKKSKNGESDDDDSADEIDEDVSEDGELASGSDVDGEDGAEDSGSEGGDGASESSGENSDEEDAEVDDGKWEEIASSTSVEGRRKYKAHFGHLLSDAQVAATGLAPSAVGAISMATTGAQAKGKSSKRSEKEGSATAVASLAPLQVPSRTMEPDGADFASLIAGYGDVLHDARDLSEGGEAMRRAYCMHACNHVWAAQAQVVKHNAKLRQASSSSSEGGASRTAELPEYRDQGFTRPRVLIVAPFRESARRIVEAIGHIICENVGVANASKFKDEFGAPAEDDGDKDGSEGRDGKAADYKALFTGNIDDCFRVGIAVQKKKMRLYSEFYRSDIIVASPLGLRMIIGADGEKGRDFDFLSSIEVVVLDQTDVFLMQNWEHVTHLFEHMNLIPKQPHADTDFSRVREWFLNGWAGGKGYASFTLMQLRMHLVFTRIPCTSYANLPEERFDYFLKKVLPKIRGALGNHTMLFVPSYFDFVRIRNHFKKERYEFAQICEYTKNSNVSRARTYFFHGKRPLLVYTERFHYFRRYRVRGIRNVVFYAPPENAHFYSEMVNLLDGNVGGGGDVTCSVLYSKYESLRLERIVGTTRSQKMLASEKDTHMFC* # PASA_UPDATE: g9946.t1, single gene model update, valid-1, status:[pasa:asmbl_1475,status:3], valid-1 NODE_13_length_69504_cov_42.3791 . gene 58879 60901 . - . ID=g9946;Name=g9946.t1 NODE_13_length_69504_cov_42.3791 . mRNA 58879 60901 . - . ID=g9946.t1;Parent=g9946;Name=g9946.t1 NODE_13_length_69504_cov_42.3791 . five_prime_UTR 60694 60901 . - . ID=g9946.t1.utr5p1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 60628 60901 . - . ID=g9946.t1.exon1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 60628 60693 . - 0 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 60371 60434 . - . ID=g9946.t1.exon2;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 60371 60434 . - 0 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 60259 60278 . - . ID=g9946.t1.exon3;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 60259 60278 . - 2 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 60094 60166 . - . ID=g9946.t1.exon4;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 60094 60166 . - 0 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 59617 59726 . - . ID=g9946.t1.exon5;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 59617 59726 . - 2 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 59253 59332 . - . ID=g9946.t1.exon6;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 59253 59332 . - 0 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . exon 58879 59000 . - . ID=g9946.t1.exon7;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . CDS 58937 59000 . - 1 ID=cds.g9946.t1;Parent=g9946.t1 NODE_13_length_69504_cov_42.3791 . three_prime_UTR 58879 58936 . - . ID=g9946.t1.utr3p1;Parent=g9946.t1 #PROT g9946.t1 g9946 MAGIALTRLAEERKNWRKDHPFGFFAKPKTLPDNSMNLKEWECGIPGKKGTIWEGGVYKLVMLFTDDYPAAPPKCKFDPPLFHPNIFPSGTVCLSLLDAEKDWRPAVTIKQILLGIQELLNDPNEKDPAQSEAFYMYTGDKAQYERVVKQQAQRFTPK* # ORIGINAL: g9935.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 16020 20492 . - . ID=g9935;Name=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 16020 20492 . - . ID=g9935.t1;Parent=g9935;Name=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 20270 20492 . - . ID=g9935.t1.exon1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 20270 20492 . - 0 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 19148 20127 . - . ID=g9935.t1.exon2;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 19148 20127 . - 2 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 18826 19011 . - . ID=g9935.t1.exon3;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 18826 19011 . - 0 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 18490 18614 . - . ID=g9935.t1.exon4;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 18490 18614 . - 0 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 17451 18282 . - . ID=g9935.t1.exon5;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 17451 18282 . - 1 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 17076 17265 . - . ID=g9935.t1.exon6;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 17076 17265 . - 0 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 16719 16950 . - . ID=g9935.t1.exon7;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 16719 16950 . - 2 ID=cds.g9935.t1;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 16020 16497 . - . ID=g9935.t1.exon8;Parent=g9935.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 16020 16497 . - 1 ID=cds.g9935.t1;Parent=g9935.t1 #PROT g9935.t1 g9935 MSASICWGSARTLRASINHITRAAIAPVACASATSSAVRICVADTRSTRPSNSPTMSPKRSFSAESSPYKAVIFDLGGVVVGSPFGAIAAYEKEAGIEAGAINRVIRAGGETGAFSRLERGEMSLEEFLAIFEKECHSVGGIKIDARKLFAGIHAALEPSPQMLDAIQCIRAEGIKTAALTNNWKVTPQDTAGLIMFGGVRSTDSGESIRLVDIFDKVIESCVEGLRKPDPRIFQRACDRLGIRPMEAIYLDDIGTNCKSAASLGMLAIKVEDPSVAVENLERLMGFSLKGYVKGTTLVRQGHNFDAEALRSHLARTINLGQGSLSVRQFAHGQSNPTFHIRAPNGREFVLRKKPPGYLLPSAHAIEREYRVMAALAQAGFPVPRMHTLCEDSSVIGTPFYVMDYVRGRLFKDPSIPGMSPKERSEIYTAMCGVLASLHSIDPDKIGLTDYGRRENYAVRQVQRWSQQYRASQTEEIPAMEQIMEWLPKNIPPEGPTGIVHGDFRLDNIIFHPTEPRVLAVLDWELSTLGDPISDVSYNCLPYHLSPQFPGLRGFAGKDTSALGIPSEPEYVAEYCRRVKRPPVQGWNFYMGFSFFRVAAILQGVYQRALKGQASASNAQAVGAMAKEMATIAVRIAGINGTPSSLVDTDAGKSGASGPVSTRARHAEAHVAPSRKLTGRAEELRVKLLEFMDAHVYKAERAMAAHAQTDARWTIHPLVENLKQKAKEAGLWNLFMPVETDGGKYGAGLTNWEYAHLCEVMGRVLFSSELFNCSAPDTGNMEIIVRYGTEQQKAKWLMPLLEGTTRSCFAMTEPAVASSDATNISTRIERVGDEIVINGHKHWISGAMDPRCKLAIVLGRSDPHAPKHLQHSMVLVPMDAPGVTVRRPMTVMGFDDAPHGHAEMTFENVRVPAENVLLGLGRGFEIAQGRLGPGRIHHCMRLIGHAERALELMCHRVLNRTAFGKPLAEQGTIIADIAASRLDIEQARLLTLRAAELMDTVGNKAARAEIAMIKVAAPAMASRVIDRAMQAHGGVGLSGDTPLAQLWTWARVLRLADGPDEVHVQTVGLSELAKYRKAAKL* # ORIGINAL: g9936.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 21125 21862 . + . ID=g9936;Name=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 21125 21862 . + . ID=g9936.t1;Parent=g9936;Name=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 21125 21138 . + . ID=g9936.t1.exon1;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 21125 21138 . + 0 ID=cds.g9936.t1;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 21270 21346 . + . ID=g9936.t1.exon2;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 21270 21346 . + 1 ID=cds.g9936.t1;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 21445 21633 . + . ID=g9936.t1.exon3;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 21445 21633 . + 2 ID=cds.g9936.t1;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 21753 21862 . + . ID=g9936.t1.exon4;Parent=g9936.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 21753 21862 . + 2 ID=cds.g9936.t1;Parent=g9936.t1 #PROT g9936.t1 g9936 MKLVRFLMKLSSETVTIELKNGTVVHGTIIGVDHSMNTHLKSVKMTVRNKDPVTLESLSIRGNNIRYFILPDSLPVDTLLIDDTPKIKAKKKEVAMGRGRGRGGVRGRGRGGPRGGGGAGAPRGRGGPR* # ORIGINAL: g9949.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 66393 69348 . + . ID=g9949;Name=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 66393 69348 . + . ID=g9949.t1;Parent=g9949;Name=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 66393 66441 . + . ID=g9949.t1.exon1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 66393 66441 . + 0 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 66594 66679 . + . ID=g9949.t1.exon2;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 66594 66679 . + 2 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 66813 67980 . + . ID=g9949.t1.exon3;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 66813 67980 . + 0 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 68212 68301 . + . ID=g9949.t1.exon4;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 68212 68301 . + 2 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 68530 68640 . + . ID=g9949.t1.exon5;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 68530 68640 . + 2 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 68965 69034 . + . ID=g9949.t1.exon6;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 68965 69034 . + 2 ID=cds.g9949.t1;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 69249 69348 . + . ID=g9949.t1.exon7;Parent=g9949.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 69249 69348 . + 1 ID=cds.g9949.t1;Parent=g9949.t1 #PROT g9949.t1 g9949 MSRHVDVVDRRLRPIYDAIDVKNYKSAIQYADKAIKKSATDHTAKVLKAIALARSNKQRQGDARALVEEVKKAGGLDDATLQAMVLFYKDIGDIHAMVPVYESAVKAFPKNEEFAAHYFMACVRSLDFKQQQLAATNLVKNFPLSQKYQMWAIQSVFMRALDARAAGDATQADRLLLPLAERMFGKARDEKKVEREDDVRLLYAIYEAQGKWAEAIELVDGELGGKFDHPWERDELLAAALSASSRYADVARVHTATIERDADLWSAWAGLIDAASLRADAGEKEAALDDVQKMIDGAIAKQLEGDVSAGRRKRGPFLARVKLLVLRNGGKLEGAGLDAVVEYVRLFGGRPSCADDIRGYLSGLTSTSVGDALVARLTDVALGIDGIDAVEALLRRITVAQIDWIAGGKRALAPADRIELARTFIDRYSEGLVLGKDLTEKQPQYCDGYAHLAAVCLLSVHEETGKIEPLLGAVSVLEVALTRSKYAYLLRILLMGIYSILGAAEPANVHYRFLEPKHVQQDSISYIANEHLSRLGLHAEALGIFTDMLTHFDNNERE # ORIGINAL: g9942.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 50148 51242 . + . ID=g9942;Name=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 50148 51242 . + . ID=g9942.t1;Parent=g9942;Name=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 50148 50215 . + . ID=g9942.t1.exon1;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 50148 50215 . + 0 ID=cds.g9942.t1;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 50323 50377 . + . ID=g9942.t1.exon2;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 50323 50377 . + 1 ID=cds.g9942.t1;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 50630 50783 . + . ID=g9942.t1.exon3;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 50630 50783 . + 0 ID=cds.g9942.t1;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 50921 51078 . + . ID=g9942.t1.exon4;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 50921 51078 . + 2 ID=cds.g9942.t1;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 51207 51242 . + . ID=g9942.t1.exon5;Parent=g9942.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 51207 51242 . + 0 ID=cds.g9942.t1;Parent=g9942.t1 #PROT g9942.t1 g9942 MATYRRKNKWMVDFSTSQAVASRDAQTVAEPPGFSRRGVDKKAWEVAFSPGKSLPMNAFMMYMAGNTVHIFSIMITFMMFFNPIKAIFGVNQAFSKFQGLSLVLHKIVFVLCNCAAVAMALYKCSNLGLLPTAASDWLAFRDFAEINDVSGGGVAF* # ORIGINAL: g9931.t1 original gene structure, not modified by PASA NODE_13_length_69504_cov_42.3791 AUGUSTUS gene 3205 4939 . - . ID=g9931;Name=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS mRNA 3205 4939 . - . ID=g9931.t1;Parent=g9931;Name=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 4580 4939 . - . ID=g9931.t1.exon1;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 4580 4939 . - 0 ID=cds.g9931.t1;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 4267 4437 . - . ID=g9931.t1.exon2;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 4267 4437 . - 0 ID=cds.g9931.t1;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 3489 4047 . - . ID=g9931.t1.exon3;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 3489 4047 . - 0 ID=cds.g9931.t1;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS exon 3205 3287 . - . ID=g9931.t1.exon4;Parent=g9931.t1 NODE_13_length_69504_cov_42.3791 AUGUSTUS CDS 3205 3287 . - 2 ID=cds.g9931.t1;Parent=g9931.t1 #PROT g9931.t1 g9931 MRNPTPSMGLTFGPGASGMPDIHGKVAIKTERPMKENTSAPANNAQIATSDAAATNGSIPLMRPLAPSFQGAAAPTNVVHSGPDEDALPSLNWLQSVNLNCSALFTAKKNNATRKCTKPQEAQHVMKDRKGKPPFSFACLIAMALSSSPTKRMTVSQIYNWIRDNFPYFKNSTNGWKNSIRHNLSLNKCFCKVPREGGEPGKGSFWRVNPAYQRVIIREILKYRQRLAGTEFAFPKDVELDFSSPRRPLPNTQAAPPAGEAAQQTAPSTADADAQVQSASQGSVSQQMHPPKTPYAAHLHSVLMNRARRTGTPLARMFSPLGPLLDDVTFEAADWFTMDDVDLSMFGSGAFEMMDDEGMEDVEGDSLGESGSKSPFGFHVGKLAFDDFEM* # ORIGINAL: g1916.t1 original gene structure, not modified by PASA NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS gene 764 1444 . + . ID=g1916;Name=g1916.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS mRNA 764 1444 . + . ID=g1916.t1;Parent=g1916;Name=g1916.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 764 1444 . + . ID=g1916.t1.exon1;Parent=g1916.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 764 1444 . + 0 ID=cds.g1916.t1;Parent=g1916.t1 #PROT g1916.t1 g1916 MSTPTAPTSTTSTTSTTSTATTDTTAAPTAAATTAPIKLTEDQTIALITAMGGATVGKLYTLAMRISKAPSGAPTNSADCLEFAQTLTLLTDAELAQIVGSNTDNLVERRTMYMQLLSRLTSNPEVMDSFSKFLTTRVAPGLEKSTKMDPADLNNLVNFFTTLGRRRQEGSEKFKYIAIGAGIAALIFAIALIGLYFYMRGSCSPAVAMNAVSNYAPLSNFAVPTA* # ORIGINAL: g1917.t1 original gene structure, not modified by PASA NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS gene 1557 2299 . + . ID=g1917;Name=g1917.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS mRNA 1557 2299 . + . ID=g1917.t1;Parent=g1917;Name=g1917.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 1557 1701 . + . ID=g1917.t1.exon1;Parent=g1917.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 1557 1701 . + 0 ID=cds.g1917.t1;Parent=g1917.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 1872 2299 . + . ID=g1917.t1.exon2;Parent=g1917.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 1872 2299 . + 2 ID=cds.g1917.t1;Parent=g1917.t1 #PROT g1917.t1 g1917 MTLLDRMPDKESVCLADFQNELVKLSAKDGAWTMLPSPAANQEPWWRGERSAMSSVSIPVAGLSGCETGHDAPESAYWAYALGVLRNTDSAVDDVGEGAPLCTASSIVWGEYNTGNGTPRVGIVRLTDSAESLKTCELVQLVNNVDAFELEDVYFPHCSPFETAMDPSHSNMLFCQRPWKHLIFSKPLFF* # ORIGINAL: g1918.t1 original gene structure, not modified by PASA NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS gene 5581 6396 . - . ID=g1918;Name=g1918.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS mRNA 5581 6396 . - . ID=g1918.t1;Parent=g1918;Name=g1918.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 5581 6396 . - . ID=g1918.t1.exon1;Parent=g1918.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 5581 6396 . - 0 ID=cds.g1918.t1;Parent=g1918.t1 #PROT g1918.t1 g1918 MARYIDIGVNLANKRFDNIRDEVIKDATDWNVDMILTGTSIASSKAVQQIVNKFPTMFFTAGVHPHSASSLLGADFSQIEQLATDPKCVAVGECGLDYFRTLSPREVQIDCFKRHIDLALRLNKPLFLHERQAHEDFYQILREAQDKCGGKLRGVVHCFTGNAEEARKYLSLGSEWYIGITGWICDKRRNAPLLAALPHIPLDRIMVETDAPFLSPVKDCPLNVPSYVYYVVKRIAQELKRDESEVTEIFYKNTLRCFDLARTAAPPRCEV* # ORIGINAL: g1919.t1 original gene structure, not modified by PASA NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS gene 7107 8420 . - . ID=g1919;Name=g1919.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS mRNA 7107 8420 . - . ID=g1919.t1;Parent=g1919;Name=g1919.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 7107 8420 . - . ID=g1919.t1.exon1;Parent=g1919.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 7107 8420 . - 0 ID=cds.g1919.t1;Parent=g1919.t1 #PROT g1919.t1 g1919 MNLAPKNGDLDLVKRLTSANCTGALNHSEGGDIHDGCSDCTVAAMDLAAENGHLSVVKWLSANRTEGCTTYAMNTAAGNGHLPVVEWLSANRTEGCTTEAMNWAAGNGHLPVVEWLGANRTEGCTTDAMNWAAENGHLSVVKWLSANRTEGCTTDAMNRAAGNGHLPVVEWLSANRTEGCTTYAMNMAAENGNFDIVKCLSANTGKTLNRPEGAASDKLRCYNEWGRAIDAMEMAARIGNHDIVEWMRSIRESGESVCTTYAMDWAAKNGHLDVVKWLSANRIEGCTTLAMDWAAESGHLEVVKWLSTNRTEGCTRYAMELAAGNGHLAVVEWLRENHTARSPHSEGNIHELRSESGTAHSEGNIHELRSESATAHSEGGDSDELRSESGSEGSEGGDSNELRSESGTAHSYGYIAVKWLGGILMQTLGWFLTPWSR* # ORIGINAL: g1920.t1 original gene structure, not modified by PASA NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS gene 9825 10088 . - . ID=g1920;Name=g1920.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS mRNA 9825 10088 . - . ID=g1920.t1;Parent=g1920;Name=g1920.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS exon 9825 10088 . - . ID=g1920.t1.exon1;Parent=g1920.t1 NODE_1586_length_10349_cov_23.0694_potentialcontaminant AUGUSTUS CDS 9825 10088 . - 0 ID=cds.g1920.t1;Parent=g1920.t1 #PROT g1920.t1 g1920 MSPSTAAVDSEMYDDADGNSSWLDGLHRREPGRAASGKTPFPNDKQYDAPCASLGIAFGVATDNRTRAPSSTSSIVRTSESNDGRSD* # ORIGINAL: g6139.t1 original gene structure, not modified by PASA NODE_4093_length_2193_cov_35.3695 AUGUSTUS gene 283 2065 . - . ID=g6139;Name=g6139.t1 NODE_4093_length_2193_cov_35.3695 AUGUSTUS mRNA 283 2065 . - . ID=g6139.t1;Parent=g6139;Name=g6139.t1 NODE_4093_length_2193_cov_35.3695 AUGUSTUS exon 1691 2065 . - . ID=g6139.t1.exon1;Parent=g6139.t1 NODE_4093_length_2193_cov_35.3695 AUGUSTUS CDS 1691 2065 . - 0 ID=cds.g6139.t1;Parent=g6139.t1 NODE_4093_length_2193_cov_35.3695 AUGUSTUS exon 283 1487 . - . ID=g6139.t1.exon2;Parent=g6139.t1 NODE_4093_length_2193_cov_35.3695 AUGUSTUS CDS 283 1487 . - 0 ID=cds.g6139.t1;Parent=g6139.t1 #PROT g6139.t1 g6139 MVTPPRPRPFSHHDTTESIREGNENLFKLAREIYQDLDTSSVIHKILEEALMLISAERCSLFLVDETTNELYSTAFDVGSRMQLNEEDSDNPAPQRRERAKSFVGHEFRFKIGSGIAGHVAMTGEVVNLEDAYLDGRFNKMIDIQTGFRTRTLLCMPIRDGGQKDGKIIGVAQLVNKKGSLIDDDSLIVPEDGLLLTPALPVFDETDVTDFGNFLVLCGIAIKNALLYDDARRSHMEAAALATKNRELYERAEMEAKKSRTLLELAKSIFQEHDLRSLAGKIILHAKDLVAADRCSLFFVDHARQELYATVFDNATSDSPSVHPSEVRMPMTSGIAGHVAVTGKSVNIPDAYADLRFNKDIDLQTGYHTQTILCMPISDGETIVGVTQLINKRNGEQFTEQDEDIFTAFAAFCGLGLHKALLVNAITSERKRLEVALEVMSYHSQASSEEAHALSLTKVPSALELGAIDTFEFDPHSCPEESLVVVVLRMFIDLQFPAKYNIPYETLCRFVLTIKRNYRAVPYHNF # ORIGINAL: g7260.t1 original gene structure, not modified by PASA NODE_2082_length_7827_cov_57.7099 AUGUSTUS gene 341 1909 . - . ID=g7260;Name=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS mRNA 341 1909 . - . ID=g7260.t1;Parent=g7260;Name=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 1653 1909 . - . ID=g7260.t1.exon1;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 1653 1909 . - 0 ID=cds.g7260.t1;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 1373 1453 . - . ID=g7260.t1.exon2;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 1373 1453 . - 1 ID=cds.g7260.t1;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 944 1056 . - . ID=g7260.t1.exon3;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 944 1056 . - 1 ID=cds.g7260.t1;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 341 489 . - . ID=g7260.t1.exon4;Parent=g7260.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 341 489 . - 2 ID=cds.g7260.t1;Parent=g7260.t1 #PROT g7260.t1 g7260 MDAVALHGSESSVVSSPTGEHRSEHGNAHANGDHNKNGDPSTSSTNSLHGTAANGILALTPAELAGKLFRYEGFKRGDIAEQLSKNTEYNRAVAKEYLSHFDFTGEQLDKSLRKFIKAFEFKGETQEKGRILNAFADRYHDNNPIAFTSSDAANALTFSIILLNTDLHNPNVEKKMSLHDFIKNNTGLNDGKDFSSDILK # ORIGINAL: g7261.t1 original gene structure, not modified by PASA NODE_2082_length_7827_cov_57.7099 AUGUSTUS gene 2759 7592 . - . ID=g7261;Name=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS mRNA 2759 7592 . - . ID=g7261.t1;Parent=g7261;Name=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 6556 7592 . - . ID=g7261.t1.exon1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 6556 7592 . - 2 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 6139 6207 . - . ID=g7261.t1.exon2;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 6139 6207 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 5630 5790 . - . ID=g7261.t1.exon3;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 5630 5790 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 5210 5291 . - . ID=g7261.t1.exon4;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 5210 5291 . - 1 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 4935 4981 . - . ID=g7261.t1.exon5;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 4935 4981 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 4735 4795 . - . ID=g7261.t1.exon6;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 4735 4795 . - 1 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 4453 4539 . - . ID=g7261.t1.exon7;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 4453 4539 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 4193 4267 . - . ID=g7261.t1.exon8;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 4193 4267 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 3725 3880 . - . ID=g7261.t1.exon9;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 3725 3880 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS exon 2759 3391 . - . ID=g7261.t1.exon10;Parent=g7261.t1 NODE_2082_length_7827_cov_57.7099 AUGUSTUS CDS 2759 3391 . - 0 ID=cds.g7261.t1;Parent=g7261.t1 #PROT g7261.t1 g7261 YDGPPVTTLNGTFSLFDNKAEQRGGGAYLLLNFEVGSQAAYNDTFVTVTNCTSSVGGGVFVSNAVVSYVSVVGVKKYFMCENNTAAIDGADFASGLNDLHASAKSPVASVAYSGYRFPPIVVVPRDIFGQVWYGVGQVDAIMSMQLKNGTWVDATMYLSGGTILVTGDLTGAGFVVFDGLLLSTTFNEDASMRLSFTCTSRGSGFYAASMMTAGDAATLYGATISTRGVSPQNVLDSVTRKSDNFIPFMTKACDYSVYENECLKNVVGSGGDFTTGDYVAAIIPPFVTGLALAVGIMLLYVRRRRMRKSRETHEKFVQENIHGRADLEMLLVPREDLELADQLGEGEFGVVFKARVIVGGQWKVCAAKTVKAGATAAQRVEFLAEAEIMSKLSHVNVVGLIGMCTDEEPMCILVEYAGHGTLRQFVSAIAPSRQRLRSTQSQLVDFAAQVCRGMQYLFKSNVVHRDLAARNCMVATSSDGNFVVKISDFGLSRTINEGSYYRKQKNRPLPIKWMAPETLTRHTFSSMSDVWSFGVVLWEIFSFGSHPYPGIPVASVMDRLRQGYRMSSPDTCTDDMYAIMCHCWTEDPHGRPTFAVMSEALSTMAQLGVAGRPSLPPAPPKKSSTVAWQQTGMTLLAAVSEFGSKLSRGSFQRTPPRSRKGSGVELQAVVTNPAYLQQQQQLQQLRGDTNAESPYLTLEGPQEETPTGTRARRTMPVIITQRPSSVTSAEEVARQQQPSMDPQVRRSAVVSFGDEQQLQQQQQQQQQQQQQLEHEHEQQSGTGLVAPVETRDASVAMESTV* # PASA_UPDATE: g11876.t1, single gene model update, valid-1, status:[pasa:asmbl_3714,status:3], valid-1 NODE_2187_length_7360_cov_38.5556 . gene 5164 7096 . - . ID=g11876;Name=g11876.t1 NODE_2187_length_7360_cov_38.5556 . mRNA 5164 7096 . - . ID=g11876.t1;Parent=g11876;Name=g11876.t1 NODE_2187_length_7360_cov_38.5556 . five_prime_UTR 7031 7096 . - . ID=g11876.t1.utr5p1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . exon 6983 7096 . - . ID=g11876.t1.exon1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . CDS 6983 7030 . - 0 ID=cds.g11876.t1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . exon 6709 6717 . - . ID=g11876.t1.exon2;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . CDS 6709 6717 . - 0 ID=cds.g11876.t1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . exon 6042 6224 . - . ID=g11876.t1.exon3;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . CDS 6042 6224 . - 0 ID=cds.g11876.t1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . exon 5632 5799 . - . ID=g11876.t1.exon4;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . CDS 5632 5799 . - 0 ID=cds.g11876.t1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . exon 5164 5272 . - . ID=g11876.t1.exon5;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . CDS 5222 5272 . - 0 ID=cds.g11876.t1;Parent=g11876.t1 NODE_2187_length_7360_cov_38.5556 . three_prime_UTR 5164 5221 . - . ID=g11876.t1.utr3p1;Parent=g11876.t1 #PROT g11876.t1 g11876 MANKKILSVLPAGLSFIGWFLLLVFTAKLSYDANHPTNNNEDNTAYLYTFSNAGDMWYLWAILFLQLGTAILAFVGKPIAASRLFIVVLVLMFQFFAVTAKSLKPCNSDPIKSTRKTACQYNSLGMAGAVISFVAAALGVFLIETEVSDKFN* # PASA_UPDATE: g11875.t1, single gene model update, valid-1, status:[pasa:asmbl_3713,status:12], valid-1 NODE_2187_length_7360_cov_38.5556 . gene 1075 4773 . + . ID=g11875;Name=g11875.t1 NODE_2187_length_7360_cov_38.5556 . mRNA 1075 4773 . + . ID=g11875.t1;Parent=g11875;Name=g11875.t1 NODE_2187_length_7360_cov_38.5556 . five_prime_UTR 1075 1259 . + . ID=g11875.t1.utr5p1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 1075 1424 . + . ID=g11875.t1.exon1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 1260 1424 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 1656 1913 . + . ID=g11875.t1.exon2;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 1656 1913 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 2248 2346 . + . ID=g11875.t1.exon3;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 2248 2346 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 2647 2763 . + . ID=g11875.t1.exon4;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 2647 2763 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 3255 3366 . + . ID=g11875.t1.exon5;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 3255 3366 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 3632 3789 . + . ID=g11875.t1.exon6;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 3632 3789 . + 2 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 3940 4045 . + . ID=g11875.t1.exon7;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 3940 4045 . + 0 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . exon 4336 4773 . + . ID=g11875.t1.exon8;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . CDS 4336 4655 . + 2 ID=cds.g11875.t1;Parent=g11875.t1 NODE_2187_length_7360_cov_38.5556 . three_prime_UTR 4656 4773 . + . ID=g11875.t1.utr3p1;Parent=g11875.t1 #PROT g11875.t1 g11875 MFLRRASALASSAAAARVQLIATRVPVCLSATRGYATDDKVGRSAYLDMQATTPMDPRVLDAMGPYLYSYFGNPHSRTHEYGWESEKAVETARAQVADLIGADPKEIVFTSGATESNNIAIKGVAHFYNSKKKNHIITTQTEHKCVLDSCRVLQEEGFDVTYMPVQTNGLVDLQELEAAIRPETSIVSIMTVNNEIGVLQPVAEIGRLCRSKKVFFHTDAAQAIGKVPINVEEMNIDLMSISGHKVYGPKGIGALYVRRKPRVRLEPIQSGGGQERGLRSGTVPTPLVVGLGAACEVAKKEMKYDHARMVKLSQRLLDGIASRIDHVVRNGDPVQTYPGCINLSFAYIEGESLLMALNKFALSSGSACTSSSLEPSYVLRAIGTDEELAHSSIRFGIGRFTTEKEIDHLVEECVTQVKRLRDMSPLYEMVQEGVDLKTIQWTQH* # ORIGINAL: g11874.t1 original gene structure, not modified by PASA NODE_2187_length_7360_cov_38.5556 AUGUSTUS gene 213 771 . - . ID=g11874;Name=g11874.t1 NODE_2187_length_7360_cov_38.5556 AUGUSTUS mRNA 213 771 . - . ID=g11874.t1;Parent=g11874;Name=g11874.t1 NODE_2187_length_7360_cov_38.5556 AUGUSTUS exon 213 771 . - . ID=g11874.t1.exon1;Parent=g11874.t1 NODE_2187_length_7360_cov_38.5556 AUGUSTUS CDS 213 771 . - 0 ID=cds.g11874.t1;Parent=g11874.t1 #PROT g11874.t1 g11874 MVKTAGGTGKANPRAPKPATASASVPSAKLATTGASPIVDKKKDVTVAKKVDLKKGDHVQTKSGDKSAEHLPASAKSSVAHLDAKKKRKSDDIDDIFASKKTKLSAEVETGADTHGEVDGESEGEGEGEDDQVDPAEVYAQLQRKLAAKQKEREREKKAGDAQKKKKGAAADDDDGFSDSRGNRSQ # ORIGINAL: g2903.t1 original gene structure, not modified by PASA NODE_5324_length_906_cov_38.3141_potentialcontaminant AUGUSTUS gene 37 386 . - . ID=g2903;Name=g2903.t1 NODE_5324_length_906_cov_38.3141_potentialcontaminant AUGUSTUS mRNA 37 386 . - . ID=g2903.t1;Parent=g2903;Name=g2903.t1 NODE_5324_length_906_cov_38.3141_potentialcontaminant AUGUSTUS exon 37 386 . - . ID=g2903.t1.exon1;Parent=g2903.t1 NODE_5324_length_906_cov_38.3141_potentialcontaminant AUGUSTUS CDS 37 386 . - 0 ID=cds.g2903.t1;Parent=g2903.t1 #PROT g2903.t1 g2903 MSRCSLLEKNALLENIARLRRESDEHEKTFKEGIARLRRENDEYNAQREKTFKEMTARLRRESDERERTFNKEIVQLRRECNEYKKSNARLRLERNEYKAQNARLRRERNHEEAAK # ORIGINAL: g10501.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 28894 33332 . - . ID=g10501;Name=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 28894 33332 . - . ID=g10501.t1;Parent=g10501;Name=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 32033 33332 . - . ID=g10501.t1.exon1;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 32033 33332 . - 0 ID=cds.g10501.t1;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 31717 31848 . - . ID=g10501.t1.exon2;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 31717 31848 . - 2 ID=cds.g10501.t1;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 30470 31540 . - . ID=g10501.t1.exon3;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 30470 31540 . - 2 ID=cds.g10501.t1;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 28894 30122 . - . ID=g10501.t1.exon4;Parent=g10501.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 28894 30122 . - 2 ID=cds.g10501.t1;Parent=g10501.t1 #PROT g10501.t1 g10501 MDPALDGVMFYPTEGFQQPQYQNTRMQDASLTTPRDARGGRPGHSRGRGRNASTRRGGAAHGARTDIADAATDEPHQHQADQQPYMQEYVQNSQHIVDHEDQARDPSGRGRGRAQRGRERGGRGRGISGDRDGAPTNADIADVNAVVSGYVLSADAASYEPSVAFESGRTGTALGMGMNDGQSSRGAPVVRGRGRGRGRTSGRQHGEVQNSSSPNDSNALPARGNRGKSAPKHPAPLPRTLGDGAAVAEDVGEASTGPPVPAIYASTEREHRLTSVDDNTPQTTRDGFTLEADACAPSDAADVGINARGRRGGKRHDNAPGRGRDAAATFVTAPMGRGGGRGRESRVGMGPSGGQPAPKKRLGGSRGGGRADLSEASDRTTELIESLMANTCECMVCCELVGKREPTYACTCCHVIFHMRCVQKWANSSMQPDAKGNRKDAWRCPGCQAPTTTSSLVYKCFCGKVRDPEWNPYLTPHSCGEPCLKPRPNHPACLHQCSMPCHPGPCPPCLVSVQQQCGCGKHSRRTRCSDNSGTWMCGLVCGKLLACGNHSCERLCHDGPCFECPVRETQGCYCGGSSRDAACGTGSPDAATEPPGGSVGYFSCGSMCSGMLSCGRHACERRCHAGRCGDCPLEPSVVKTCPCGSLAIEALTGKPRSICTDAVPTCGGVCGRPLSCSAGVDGAVHMCKARCHVGPCPPCHESLVVLCACGSTKAVVRCADKPPGDELCAPPCSKVCTVMRSCGRHQCNQRCCPGKLQSDPAHLCVLVCGKQLRCGHHNCEMLCHKGHCNQCLRAEFQEVSCRCGNAVILPPVPCGTPPPPCSMPCNREHPCSHPGPCQEAAVVADAAHTLSGGLDRSGVGRTSSGDSSADALSSRSCGARCSLPLLRCNHPCPQRCHPGQPCPTDARACKHPTQVTCMCGRMTAAIPCTDAVRARSALSAAYAMIGGKMSDDGGAMQLRPNAALECDSACAAVERNRRLAGALEIEDANLSATPHPPYSEFLFLHAKAAKSGMQLVEFLEREYASLCNRARAENQPRHVTLPVMNQINRRVAHELAEAYCLQSESIDPEPSRSVAVTAIPSRSVVPGVLLSTLATYCPTYAATARFVQAGKSTAPVEVQVSAQISGKTSRDAWEWPDVANVADIYGGRWGPASGAAGGAQMQGIGQSADKTDAPSTQRTTPMALQESVRSAGGNEAGVERHVPDSWDDDVVSPSGPATARRGAPAVAVVDDDTVPADWTSLAD* # ORIGINAL: g10497.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 13461 15021 . + . ID=g10497;Name=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 13461 15021 . + . ID=g10497.t1;Parent=g10497;Name=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 13461 13501 . + . ID=g10497.t1.exon1;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 13461 13501 . + 0 ID=cds.g10497.t1;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 13641 13717 . + . ID=g10497.t1.exon2;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 13641 13717 . + 1 ID=cds.g10497.t1;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 13866 14824 . + . ID=g10497.t1.exon3;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 13866 14824 . + 2 ID=cds.g10497.t1;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 14983 15021 . + . ID=g10497.t1.exon4;Parent=g10497.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 14983 15021 . + 0 ID=cds.g10497.t1;Parent=g10497.t1 #PROT g10497.t1 g10497 MPRDCSSKVLVDSFGVAASSKDPVSLFAYMKKSIETAADVRQRDRSAAEVWLDARSEDVMKMLSTLPRELSLASLVVDLVEFTSKKQQSVAGTAPGAVEAQLQSPHEQSLGDTPEVNAPVFMRCSNCGRLKEGRNAPSQTGDDSDETTFASMADRVFSSRFFTAMSTAVTQATNSLSAATAPEPAKFFTSQEKGVEVGDIERVLLAHFFTSLEKGAPPEPVEVLPTIPLIPPKVIKDMQPKGQDKSTTGKQITLSRGTDDVPVTLQTSSKQAGRSNIYYRPVTEIGEDVGMRRSSPSVSSEGGRRTTDGASGSPNSPNRDARKSQIPKKRAATLEEGALRPPTPTDEQRLRSVSSSDELFQIWKSTRENVK* # PASA_UPDATE: g10495.t1, single gene model update, valid-1, status:[pasa:asmbl_7460,status:3], valid-1 NODE_45_length_51523_cov_40.6852 . gene 2939 6702 . + . ID=g10495;Name=g10495.t1 NODE_45_length_51523_cov_40.6852 . mRNA 2939 6702 . + . ID=g10495.t1;Parent=g10495;Name=g10495.t1 NODE_45_length_51523_cov_40.6852 . five_prime_UTR 2939 2967 . + . ID=g10495.t1.utr5p1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 2939 3111 . + . ID=g10495.t1.exon1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 2968 3111 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 3300 3389 . + . ID=g10495.t1.exon2;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 3300 3389 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 3598 3804 . + . ID=g10495.t1.exon3;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 3598 3804 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 4063 5284 . + . ID=g10495.t1.exon4;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 4063 5284 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 5490 5596 . + . ID=g10495.t1.exon5;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 5490 5596 . + 2 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 5855 5947 . + . ID=g10495.t1.exon6;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 5855 5947 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 6140 6216 . + . ID=g10495.t1.exon7;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 6140 6216 . + 0 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . exon 6451 6702 . + . ID=g10495.t1.exon8;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . CDS 6451 6514 . + 1 ID=cds.g10495.t1;Parent=g10495.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 6515 6702 . + . ID=g10495.t1.utr3p1;Parent=g10495.t1 #PROT g10495.t1 g10495 MSAMEGVELAAAQAGASFEAESRAVIAETRQSLNELRDIWAAPEKPLKNGTEADLIMRCSLLMLELKRISRETAVSGKALGKDTLETKQRIDGLNLQLQNLLYERDHLNKEIKKCRDFKSADQGIELISEEQLLSVRPEAAVLEPHGRMLSRLNLELEERKRLGTVHADLVKRKQSVTEEIAARRKTLDGVSTHLEGVLKATAPLGDFLAAGDNRAPVSSSLSLAGNTSAASLLPRSLYIVYVHASACASAFGTPKSISIVGDLTDARSFNDANTENLWRGSDALEDEDDTEEGAVGRDDTGQPAQVRRRRNTTASMLEERKKALIRRHPLSVEAVIECVEGISVTVRFEYVPVMAIVTAHAYAHDPKGPADRAKTALTGDALLAELYPGDSGLQLPTPSAYLRLDASGLKDLDAATFREIGRPFRWAQWIGGLDALPPPEMLAPNTSGGTVDALPTSRHHTAQIFAALRERVAARVALYGLGQKLLARAKEVPLTPAAAKLFNLKPLSSMADFREISEDEFRETASKRAGSASEHYSGVVGVRYFRATFTRDTASLSTVIAVHPAYPLQAPIFRAWFSEPYANNVEDVRTIEREVNGQYPDITVGGEEHFLLANQLRMLQMCFDIFVETEKSGEESSGRIFLRKHKGRDRARPFKFNHLIAFFNPR* # ORIGINAL: g10500.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 25248 27955 . - . ID=g10500;Name=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 25248 27955 . - . ID=g10500.t1;Parent=g10500;Name=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 27810 27955 . - . ID=g10500.t1.exon1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 27810 27955 . - 0 ID=cds.g10500.t1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 27559 27710 . - . ID=g10500.t1.exon2;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 27559 27710 . - 1 ID=cds.g10500.t1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 27178 27339 . - . ID=g10500.t1.exon3;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 27178 27339 . - 2 ID=cds.g10500.t1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 26033 26127 . - . ID=g10500.t1.exon4;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 26033 26127 . - 2 ID=cds.g10500.t1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 25691 25788 . - . ID=g10500.t1.exon5;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 25691 25788 . - 0 ID=cds.g10500.t1;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 25248 25419 . - . ID=g10500.t1.exon6;Parent=g10500.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 25248 25419 . - 1 ID=cds.g10500.t1;Parent=g10500.t1 #PROT g10500.t1 g10500 MPETERKLAYGGRSRFLCGGRFVTSPDSHVLFMTLALIIIPCGIFFGLEAPYLWHHVSPALPICVAYLLVSTLLFLFTTALSDPGIIPRSDVDESQEDGTPVDLGTSPASYAPKPRQKEVVVNGQRITLKYCFTCKIFRPPRSSHCNTCDNCVVGGFGFLAMWSVLGLACFHTYLAMANKTTNEDIKQPFGRDSYNPFSMGSCIENLCYVVCGPRLPSAFDVQGPLVRDVEHAVEGMTPNASTHQLPAVESGIASSRGSINVNEPAAVAASASS* # PASA_UPDATE: g10507.t1, single gene model update, valid-1, status:[pasa:asmbl_7463,status:12], valid-1 NODE_45_length_51523_cov_40.6852 . gene 49369 50907 . + . ID=g10507;Name=g10507.t1 NODE_45_length_51523_cov_40.6852 . mRNA 49369 50907 . + . ID=g10507.t1;Parent=g10507;Name=g10507.t1 NODE_45_length_51523_cov_40.6852 . five_prime_UTR 49369 49436 . + . ID=g10507.t1.utr5p1;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . exon 49369 49496 . + . ID=g10507.t1.exon1;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . CDS 49437 49496 . + 0 ID=cds.g10507.t1;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . exon 49655 50023 . + . ID=g10507.t1.exon2;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . CDS 49655 50023 . + 0 ID=cds.g10507.t1;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . exon 50284 50907 . + . ID=g10507.t1.exon3;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . CDS 50284 50448 . + 0 ID=cds.g10507.t1;Parent=g10507.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 50449 50907 . + . ID=g10507.t1.utr3p1;Parent=g10507.t1 #PROT g10507.t1 g10507 MVDIGSVIRRPSFLLRLAELLFAIIVFGCIADQGKIDTPDGKICIFNGKSANCNYGLGIGVSAFIICLILIVLELLWDNLEGRQKPIAGFEFVLSAVWSLLWFVAFCLLVNQWNKTHTSGIASKRKNAAQAAIAFSFFSIVTWIPSTYFAIKKYNSDGAAAGWGSVPEGGAQYGGSYQGGQAGPDGSFAPPPAASYQ* # PASA_UPDATE: g10496.t1, single gene model update, valid-1, status:[pasa:asmbl_7467,status:12], valid-1 NODE_45_length_51523_cov_40.6852 . gene 7080 12741 . - . ID=g10496;Name=g10496.t1 NODE_45_length_51523_cov_40.6852 . mRNA 7080 12741 . - . ID=g10496.t1;Parent=g10496;Name=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 12583 12741 . - . ID=g10496.t1.exon1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 12583 12741 . - 0 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 12306 12405 . - . ID=g10496.t1.exon2;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 12306 12405 . - 0 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 11945 12066 . - . ID=g10496.t1.exon3;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 11945 12066 . - 2 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 11580 11707 . - . ID=g10496.t1.exon4;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 11580 11707 . - 0 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 10976 11345 . - . ID=g10496.t1.exon5;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 10976 11345 . - 1 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 10549 10799 . - . ID=g10496.t1.exon6;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 10549 10799 . - 0 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . exon 7080 10381 . - . ID=g10496.t1.exon7;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . CDS 7141 10381 . - 1 ID=cds.g10496.t1;Parent=g10496.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 7080 7140 . - . ID=g10496.t1.utr3p1;Parent=g10496.t1 #PROT g10496.t1 g10496 MALFFDTKIQRPENDTGTTTHLAWHNNYPILAVAATEDRAGVVGCTVRFYLDEGEHVETASISNPFLVSAIKWHPLRKVLGMGWDTGTISLWNEHEHFLHEDTSVHKARIRFLEWNSLGTRLISGDEDGVVGVWRADQRGRITPMCQYRKAGAMTHCVFRALISDKLDLSASLAEAGAFSRINGADGQGGADASWRRAQRTNPGGIAGGMAGAAGGRNPLPPAECPPFFFGGEKGIVYLADDCGQCIEAFMVGEPLQQLLFYDGRDVVLAITKSMMLSQHVVPRDGKPYKLMEVKLSMGPTPSDIIWAGMGLLATASGESKIRVWDLEKDDNYVLSLAAHSGFNDSCHIQCAAYCPMKGILAAGTNKGQVVMWRFVGWDMNSSRDDGRSCWEFLPPSDVGGNVRQVSWGSRRNLLAANMHDMIKILDEHVMVHHFRDGVGAVQTTPSRLAIERHGFATDAEVKSEMHIKGVYVTRDNIAIWNGKQVETFELAQEPPIVRPLGSFASTSQTFAVSDSSIFIGEAGKVQVCTFNGTPKQTLTLSEAEGDPIFIDAIKGYIVVATSHGFVRVYDISRREVRPHTVGKNILEAVTGAGSVISARINCAGTRVSILTTKPSLSAASGLADSRIHVWDVESDALFSFDFGPTGRVPLRHYWDPHETKVLIIEARPLHPGLGVDTEIATIFASPESGGLFMQPGNALEPGFDCLLGVELPFLFFARRASGDTQPGQRLVVGRPIRDFVGLEDCDAGTRSAMVDFSFHMTVGNMDEAFKAVKLIKSGSVWENMARMCVKTKRLDVAALCLGHMGNAAGAKALREAMKEPELDARVASLAVHVGFLDEAERLYISCGRYDLLNKFYQAGGQWEKAIAIASKNDRINLRGTCYAFGKFLEASGEISRAIDMYERSETHRFEVPRMLSDRPVELEAYVNRSSDPQLRKWWAQFAESAGEMDTAMQYYESARDHLSVVRVYCLCGNLEKANEIANDTEDPLACYHLAQQYEAQEDFRQAVRYFSRARCFNHAIRLAKEHQMDHEVMNLALQAQPEDMLDAARYYEAKQGMTDKAIVLYHRAGEISRALDMCFRTQQFDALRQIAEDLDERTDPETVNRCAAFFIEHQQYEKAVQLMLVAKKHEDAIGMCLDHAIPITEDMAERMSTPPSAKDGKESEADTAVRQKLLLRIGDACLQQRSYHLACKKFTQAGDKVQAMKALLKSGDTEKIVFFAGVSRNKDIYVMAANYLQTLDWRSDPEIMKNIIGFYTKGRALDSLAGFYDACAQVEIDEYQNYEKALGALKESFKCMTKAKMRDPAEQEAAVATLQNRIHLVNKFVAARKLGATDPDEMVRQCQVLLEEPDLESAVRAGDVYGLLIEFSASRNDFRRAYALLETMRQRLPNVNAAYFIDVNTLEAIHREVGVPMKRQGETPRAQPQQQMQMPRPTTAQSRRGYDDDDDIREDIDER* # PASA_UPDATE: g10499.t1, single gene model update, valid-1, status:[pasa:asmbl_7461,status:12],[pasa:asmbl_7468,status:12], valid-1 NODE_45_length_51523_cov_40.6852 . gene 18777 24840 . + . ID=g10499;Name=g10499.t1 NODE_45_length_51523_cov_40.6852 . mRNA 18777 24840 . + . ID=g10499.t1;Parent=g10499;Name=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 18777 18926 . + . ID=g10499.t1.exon1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 18777 18926 . + 0 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 19208 19283 . + . ID=g10499.t1.exon2;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 19208 19283 . + 0 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 19422 19985 . + . ID=g10499.t1.exon3;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 19422 19985 . + 2 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 20231 20294 . + . ID=g10499.t1.exon4;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 20231 20294 . + 2 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 20506 20938 . + . ID=g10499.t1.exon5;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 20506 20938 . + 1 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 21319 21780 . + . ID=g10499.t1.exon6;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 21319 21780 . + 0 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 21942 23814 . + . ID=g10499.t1.exon7;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 21942 23814 . + 0 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . exon 23993 24840 . + . ID=g10499.t1.exon8;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . CDS 23993 24366 . + 2 ID=cds.g10499.t1;Parent=g10499.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 24367 24840 . + . ID=g10499.t1.utr3p1;Parent=g10499.t1 #PROT g10499.t1 g10499 MDPSVLSAEEAAYYGDLFARADVQGVGIIGGANAAHFLRLSMLPDELMMQFYCVLRLIALAQNNVAPSIELATSQNVPFPMFQGVAIPYVAPAQAESSLGKSAAPSAASMSSHARSGSLDSGALLAMQLAAMQQQPSGALSDAAIAQSTSAGGSAGNLTAASSSWVGAMQPASAVPSHLTSHVRAASWDASMARSSSGTGSMGGVTSQVVLDEIGRTPPMSPVNASSRNDLTDADVPWVIGPADKQKYELSFGQLNAVNGYLNGEQVKGFFEKSELPAKDLSTIWKLSDVDADGHLGLDEFCVAMHLIIRRRRGEDLPATLPRNLIPPGMRPPLANIQSTSYGSASSSATWTASPDASGMHAFQQLQRQQQQSQTPLISLDVDPIVVVSHGPPAAEHSGAVGQAVSGGGLAVDDGHAGADDVAKRRVSEHWSSFTMERAKLATSPESVGWSDQSANDDALAQQHHHHQQQQQLQQQYHQPARPPPPSALLISQRLSSVDDALPSPSLSTSSEVTFEAEDEFEESDSITRKGDKRGGGVSLKKMLFPGKWKALEHQEMTTDATTQKKDKDKDKDKDKDKSAKGAASSLSLSARDRSLSANPQSAPVAANLTLAPADVSQQPRTSPMAPRRFTEGNKAAVPVLPVQTPPAAAVPPGRPAPPAHAQQAQQAQQAQQAQQQQQSTSTPSLSLDPSKSSTSSQFVASPVAANVWPGASPTPTAGPGSLLPPPPGASRARSASDRPSPDVSLQQQLAPSTSAPAAKETSAAPPPTRPRPPSVISAPIDVPPVDAEPRKAPPPRPSLPSIASSSSPGAADSDGELQLRERKPPSRPAPPPQSSGSGSSPAPGQEAPASAPAVAERKGSTAGPMRPPPPSTSTPIPAPESDDGQPQSAKRPMVPPRPSSVISTDSADSDAPAEPPPRQRGPSAPPRPSISSLAPISSADEDRSADKPPLPPPRRRSVSRGFNDADDADAVGGSASGGSLGAASGAADESASVGEVPASEPLKPVGRDRPRQMGKKPPRRISWSQMQSALHAAANGALGDFGGVAGESPVPREMEESSSEDEEAEASDSALPDGSSHVQQAQAQAQAQQRVPPKRPSAPARPSLPVPAKQSRPERPPPPARQLSKEDVVQYKAPRAPSVTPTVAAPAAAKPAQPERVVRVYLDDDTFKTFGMSADATAADVIKMALSRNRRDATKYTDYILFVRRDGGQKERPLRMEDECFASVEDGDVVEFACRTRQSSGSSGNKGTDEPSTTRSEKERLKQAKELRSAIKKLRHKTEVLSRLNLELEMELRRETEARMTLEAELSLTNARLREAQQQQQQQQGDAQAS* # ORIGINAL: g10502.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 33780 35212 . + . ID=g10502;Name=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 33780 35212 . + . ID=g10502.t1;Parent=g10502;Name=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 33780 33952 . + . ID=g10502.t1.exon1;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 33780 33952 . + 0 ID=cds.g10502.t1;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 34218 34318 . + . ID=g10502.t1.exon2;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 34218 34318 . + 1 ID=cds.g10502.t1;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 34431 34452 . + . ID=g10502.t1.exon3;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 34431 34452 . + 2 ID=cds.g10502.t1;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 34601 34799 . + . ID=g10502.t1.exon4;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 34601 34799 . + 1 ID=cds.g10502.t1;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 35045 35212 . + . ID=g10502.t1.exon5;Parent=g10502.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 35045 35212 . + 0 ID=cds.g10502.t1;Parent=g10502.t1 #PROT g10502.t1 g10502 MEATALHDFAATSPDEVSFKNGSIVKIINMDDCNWYKAETDFGVGFIPSNYVQMKDHSFFHGKIPRASSEQLLLNNGTQGSYLIRESESSPGDFSLSVKHDQGVQHFRIMRDDTRRYYLWEKEKFISLNALLEHFKKASVSKQDNIVLRQVLPKVQPPTGGPRVTQQVRALFDFNPQEEGELGFKKGEIVQVLDDSDPNWWMGACNGTTGLFPSSYVNKC* # ORIGINAL: g10503.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 35601 37264 . - . ID=g10503;Name=g10503.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 35601 37264 . - . ID=g10503.t1;Parent=g10503;Name=g10503.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 36790 37264 . - . ID=g10503.t1.exon1;Parent=g10503.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 36790 37264 . - 0 ID=cds.g10503.t1;Parent=g10503.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 35601 36655 . - . ID=g10503.t1.exon2;Parent=g10503.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 35601 36655 . - 2 ID=cds.g10503.t1;Parent=g10503.t1 #PROT g10503.t1 g10503 MEAIVAPGNTLAPGDAQQAATIPSTVISEPAAIQMDPQPTALVLAVDASSLQMNITQSDAQVPLTAPEKATSEASLSVIQRTEPSDTVVPKTDNAVPRESDSSSPGAVPLAKKSSGKIVKSSKKKADKKKKKKRLAEFEKKERKKHKKSSKHSKKRKEDKDEGAEILMKLAKEVKPECSEQDSSSSSDSSSSSSDSDSSSSDSGSDSTSTGEEASGRKSKKRHRRNLPKDSIAKLRSWLFEHMTNPYPSEEEKKDLADESGLSLNQISNWFINARRRYLQPMMEQAKTQVQTSWIERPPHVQPMPYGYNQRMEYPPMAAHYIAPHLPRTPMYLQPPMQPPYQSDPYHNGVPYRMATGQQRPPSFSTRPRAIHDGDSPPRKQRSRANRDSPVGDEPDNRYDTGHRAGPSMVQLPPPPGYPSPYYPPTTTWGDYPQPTPPMPQDRPHFSPQYKGGTKFRYAEGARDLIRSGLLAGASRYQPQKGTKNVRPVTTAGGVTKKSEKKKAQKGAP* # ORIGINAL: g10506.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 47655 48576 . - . ID=g10506;Name=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 47655 48576 . - . ID=g10506.t1;Parent=g10506;Name=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 48375 48576 . - . ID=g10506.t1.exon1;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 48375 48576 . - 0 ID=cds.g10506.t1;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 48215 48278 . - . ID=g10506.t1.exon2;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 48215 48278 . - 2 ID=cds.g10506.t1;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 47889 48111 . - . ID=g10506.t1.exon3;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 47889 48111 . - 1 ID=cds.g10506.t1;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 47655 47708 . - . ID=g10506.t1.exon4;Parent=g10506.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 47655 47708 . - 0 ID=cds.g10506.t1;Parent=g10506.t1 #PROT g10506.t1 g10506 MLCDMNLIGAFVAMDVRMPMWHHASVNHPTDTLHNIVPVKFRYIVFRPFIGEVLSGKIKSCTNQGLHVSLGFFDDIVIPAEHLQKDTVFDPEERLWMWKYGEFELWMDVDEPIRFRIERECFVDAPALSDSLQPESGPSMPATADQQSNVDVEHTKVAPYTLTGSVDGPGLGLIAWWKGQ* # PASA_UPDATE: g10494.t1, single gene model update, valid-1, status:[pasa:asmbl_7464,status:12], valid-1 NODE_45_length_51523_cov_40.6852 . gene 451 2004 . - . ID=g10494;Name=g10494.t1 NODE_45_length_51523_cov_40.6852 . mRNA 451 2004 . - . ID=g10494.t1;Parent=g10494;Name=g10494.t1 NODE_45_length_51523_cov_40.6852 . exon 1852 2004 . - . ID=g10494.t1.exon1;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . CDS 1852 2004 . - 0 ID=cds.g10494.t1;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . exon 1306 1533 . - . ID=g10494.t1.exon2;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . CDS 1306 1533 . - 0 ID=cds.g10494.t1;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . exon 826 1065 . - . ID=g10494.t1.exon3;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . CDS 826 1065 . - 0 ID=cds.g10494.t1;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . exon 451 689 . - . ID=g10494.t1.exon4;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . CDS 576 689 . - 0 ID=cds.g10494.t1;Parent=g10494.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 451 575 . - . ID=g10494.t1.utr3p1;Parent=g10494.t1 #PROT g10494.t1 g10494 MDTSKKNVRVFLDIDIGDAAEHARHQSAVARANKFLLEAASQYGITAASVEDLTEDDVALVKEYYANDPTWTRQGEARFEPLKSLRAGRIVIELLVDAAPKTAENFRCLCTGVKGKGKESGKPLSYKGVPFHRIIPGFMCQGGDIVRQDGSGGESIYGGKFNDEKGGLSLKHDAPGVVSMANSGKNTNSSQFFISAAALKQLDGIHVVFGKVVDGMDVVRRIESYGTTEGKPTMPVVIADCGQL* # ORIGINAL: g10504.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 40107 44999 . - . ID=g10504;Name=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 40107 44999 . - . ID=g10504.t1;Parent=g10504;Name=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 44537 44999 . - . ID=g10504.t1.exon1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 44537 44999 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 44280 44390 . - . ID=g10504.t1.exon2;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 44280 44390 . - 2 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 44055 44157 . - . ID=g10504.t1.exon3;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 44055 44157 . - 2 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 43700 43838 . - . ID=g10504.t1.exon4;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 43700 43838 . - 1 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 43501 43589 . - . ID=g10504.t1.exon5;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 43501 43589 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 43030 43189 . - . ID=g10504.t1.exon6;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 43030 43189 . - 1 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 42682 42807 . - . ID=g10504.t1.exon7;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 42682 42807 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 42142 42246 . - . ID=g10504.t1.exon8;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 42142 42246 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 41182 41965 . - . ID=g10504.t1.exon9;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 41182 41965 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 40715 40971 . - . ID=g10504.t1.exon10;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 40715 40971 . - 2 ID=cds.g10504.t1;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 40107 40550 . - . ID=g10504.t1.exon11;Parent=g10504.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 40107 40550 . - 0 ID=cds.g10504.t1;Parent=g10504.t1 #PROT g10504.t1 g10504 MGKPMIEDAPQQRRVSVDELLRGDRDAQHREIRFVAATKPDTHTDTLKRKYIALIPKAAGSAAAPVGNGKTNGKSTSVASAANGDANPGGLAAPKRILFPDERVGELLSWKETRKIGSGLVNLGNTCFLNSVLQCLTYTPPLANYMLAGEHSQQCRAAGFCVFCEMERHVQRALAGSSGAIRPKNIIQNLKNIGKQFRFGRQEDSHEFMRYVVDGMQRSCLLNASALQIDDRSKETSFVHRVFGGHLRSQVKCSQCGFESNVFEPFLDLSLEIKRCGSVEKAFSHFTKAEILEKDNAYKCSRCAKKVTASKQLTIFRAPRILSVQLKRFDYTGKIGNFIDFQETLDISPYMSSGQKDRPRYRLYAVLVHSGHSCHSGHYYCFVRNSNNVWYSMNDSSVQQVSVSSVLKQSAYILLYSRVEAVASPARTLPPMSNGKSVAVGAKPPVPSIVASSPASSSLAGEVGQVVNRQKVEAKMRLEKERLARETPNLVNGSTGASQNGIVNSHGNKVNGTNADATSSHVQGITKWEVRKASAGESVNPATLLGFAWEITPRASVGSVAPSTAAQQQQQQQQQQQTKKRSLADSDVDAANAIDTNGPLLKKARVVAETNGDANGSVALGSAAPLVLRNVNGNAGSSIAGKPAAIRQTERADVDVDGVGKVLKGAGRMWDGKRDDSVRDTFSAASFDKIGGAVRGWDGAPNTVDAADVSDESEARRRRKRDEIEEMIDRGHVKRVKRPQQDEDAMEDESPYGRDIDSDSDTDNKKVNFFQAEQGRKNEEKARAKQNGYSAESENDGHNGHNGHSHANGYGDRGAPFGNRGRGGERGGRGSFGSGGVRGGRGSFGSGGFRGGRGSFGSGDFRGGRGSFGSGGFRGNRGRGGERGGRGSFGRGSFGRGSFGRGSFGGGGGFGGRGGQERPGSSGGYR* # ORIGINAL: g10505.t1 original gene structure, not modified by PASA NODE_45_length_51523_cov_40.6852 AUGUSTUS gene 45648 46915 . - . ID=g10505;Name=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS mRNA 45648 46915 . - . ID=g10505.t1;Parent=g10505;Name=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 46703 46915 . - . ID=g10505.t1.exon1;Parent=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 46703 46915 . - 0 ID=cds.g10505.t1;Parent=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 46321 46593 . - . ID=g10505.t1.exon2;Parent=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 46321 46593 . - 0 ID=cds.g10505.t1;Parent=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS exon 45648 46184 . - . ID=g10505.t1.exon3;Parent=g10505.t1 NODE_45_length_51523_cov_40.6852 AUGUSTUS CDS 45648 46184 . - 0 ID=cds.g10505.t1;Parent=g10505.t1 #PROT g10505.t1 g10505 MESFVTTVKSVFASAFVVEEDENEQPHIVFFAKLHDRVHLHDAVIPRGHQTIRMEQLIAARLSRGKIDTPEKEQFDKLPYTEDVACRLAIDPSIGVELKSFLVVFVKHENDERGDQGTLSVLLEKSPGEVPLWRSFKLHRVAIKAVDLAAIASNIAEHVTGSVGSPARRLFDRVSKLVRLPKNSVSREEFTARVQSYLSEARDATKWGRSEAAIAFDCLHRMLYDRLRGRTCGSVVDDERDAIHARDFARKCASYRIDGGLSVLHMAATYEDVVVIQVLLDEGHDPTFELHGTRPSHLANTEFVRDVLRAAETESGNRRGRTINSGVCAAVLPVAVQPAM* # PASA_UPDATE: g10498.t1, single gene model update, valid-1, status:[pasa:asmbl_7465,status:3], valid-1 NODE_45_length_51523_cov_40.6852 . gene 15303 17790 . - . ID=g10498;Name=g10498.t1 NODE_45_length_51523_cov_40.6852 . mRNA 15303 17790 . - . ID=g10498.t1;Parent=g10498;Name=g10498.t1 NODE_45_length_51523_cov_40.6852 . five_prime_UTR 17491 17790 . - . ID=g10498.t1.utr5p1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 17481 17790 . - . ID=g10498.t1.exon1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 17481 17490 . - 0 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 17307 17357 . - . ID=g10498.t1.exon2;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 17307 17357 . - 2 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 17043 17086 . - . ID=g10498.t1.exon3;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 17043 17086 . - 2 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 16819 16911 . - . ID=g10498.t1.exon4;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 16819 16911 . - 0 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 15815 16474 . - . ID=g10498.t1.exon5;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 15815 16474 . - 0 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . exon 15303 15618 . - . ID=g10498.t1.exon6;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . CDS 15538 15618 . - 0 ID=cds.g10498.t1;Parent=g10498.t1 NODE_45_length_51523_cov_40.6852 . three_prime_UTR 15303 15537 . - . ID=g10498.t1.utr3p1;Parent=g10498.t1 #PROT g10498.t1 g10498 MAEDADWREFAKDFLAGTLGGCAGVLAGHPLDTVKVRLQTQDHASGKPLRYTGTFNCFTTIIRQEKVMGLYKGMASPMAGVMVVNAMLFGVYGNALRMFHGDATGAPTISSIFKAGSISGVINSVISCPMDLMKTQMQVQGSPGAPILYTGPWDCFRQTLKSQGLRGCYRGMVATVIRETPSYGTYFASYEYLCRLMTPPGKDVSDLSPLALMVAGGMGGVCGWLSTYPSDVVKSRMQADSPVNPQYKGLVDCIVKSYKAEGYRVFFRGLNATIVRAIPTNAMTFMVYTMSMRFMETPDRQPVGNAPGLQTE* # PASA_UPDATE: g9093.t1, single gene model update, valid-1, status:[pasa:asmbl_7073,status:3], valid-1 NODE_4184_length_2062_cov_22.7287 . gene 1323 2027 . + . ID=g9093;Name=g9093.t1 NODE_4184_length_2062_cov_22.7287 . mRNA 1323 2027 . + . ID=g9093.t1;Parent=g9093;Name=g9093.t1 NODE_4184_length_2062_cov_22.7287 . five_prime_UTR 1323 1511 . + . ID=g9093.t1.utr5p1;Parent=g9093.t1 NODE_4184_length_2062_cov_22.7287 . exon 1323 2027 . + . ID=g9093.t1.exon1;Parent=g9093.t1 NODE_4184_length_2062_cov_22.7287 . CDS 1512 1973 . + 0 ID=cds.g9093.t1;Parent=g9093.t1 NODE_4184_length_2062_cov_22.7287 . three_prime_UTR 1974 2027 . + . ID=g9093.t1.utr3p1;Parent=g9093.t1 #PROT g9093.t1 g9093 MTSANDQHAALLTGMIAGAVGRGTVCLPTCAVAVGSDHSATLVARHTLASAAINMRVVDSGQPYWLLHGHLSVVAESAASIVRKYMASADAPASVTARTWHVPLEGTGLICLVHEIDVLVGPAKAIDRALVRICESQPPAPAPEASSVCVYFC* # PASA_UPDATE: g13639.t1, single gene model update, valid-1, status:[pasa:asmbl_8113,status:3], valid-1 NODE_549_length_21425_cov_38.0955 . gene 2151 3676 . + . ID=g13639;Name=g13639.t1 NODE_549_length_21425_cov_38.0955 . mRNA 2151 3676 . + . ID=g13639.t1;Parent=g13639;Name=g13639.t1 NODE_549_length_21425_cov_38.0955 . five_prime_UTR 2151 2283 . + . ID=g13639.t1.utr5p1;Parent=g13639.t1 NODE_549_length_21425_cov_38.0955 . exon 2151 2447 . + . ID=g13639.t1.exon1;Parent=g13639.t1 NODE_549_length_21425_cov_38.0955 . CDS 2284 2447 . + 0 ID=cds.g13639.t1;Parent=g13639.t1 NODE_549_length_21425_cov_38.0955 . exon 3099 3676 . + . ID=g13639.t1.exon2;Parent=g13639.t1 NODE_549_length_21425_cov_38.0955 . CDS 3099 3441 . + 1 ID=cds.g13639.t1;Parent=g13639.t1 NODE_549_length_21425_cov_38.0955 . three_prime_UTR 3442 3676 . + . ID=g13639.t1.utr3p1;Parent=g13639.t1 #PROT g13639.t1 g13639 MTLRIARGKFLIPNVAARVALQLGREPGSSYPLVADDPEVIAKNKSPQPATKAKSIVDYAAPPTKLIGVTMTKSWIRQPPLVEASLRALGLTRMHKTIIHKNCPSINGIITRVMGHVKVTPIVVKEMNADPEKYKNVFAGSDRSFLNHKGEYVIFRKAAKGAEQQQQQ* # ORIGINAL: g13640.t1 original gene structure, not modified by PASA NODE_549_length_21425_cov_38.0955 AUGUSTUS gene 3819 6097 . - . ID=g13640;Name=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS mRNA 3819 6097 . - . ID=g13640.t1;Parent=g13640;Name=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 5246 6097 . - . ID=g13640.t1.exon1;Parent=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 5246 6097 . - 0 ID=cds.g13640.t1;Parent=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 4676 4962 . - . ID=g13640.t1.exon2;Parent=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 4676 4962 . - 0 ID=cds.g13640.t1;Parent=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 3819 4491 . - . ID=g13640.t1.exon3;Parent=g13640.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 3819 4491 . - 1 ID=cds.g13640.t1;Parent=g13640.t1 #PROT g13640.t1 g13640 MAKTAKRVRTIHCGEHASPSDILAAIGIADNFEPQSPQCEDDIGSAHAVHKDSDYSGDAANSAVEPAVIRGRIDSWAARTWTVESMSREYGDVVAKIRMIPRRVSAKRGEMSAAGTVWETDCMHVLASIRQIAEWLCWSRSVISDEANGKEADASRPAQPCSTQDRTMPTTATDTTTPTTITTTAVLPDHSALTHPTIASDVGMSFDNPLRTYSPSEFSAYLDYQHMGHLFGGSMDSARALTCVDWRLFGLDSCGGASSTLWIGSAGAHTPCHKDTYGINFVAQIQGRKRWTLFPPSESTALYPTRIPYEESSVFSRVDVASPDLHAHPGFADARAWTVELEPGDVLFVPKHWWHFVCTVEGPSIAINHWTPVPSDAEDRIKEAVVRTLICATLGSSHALSDTRRTSPPQPLDVTPPAINAQPASATSQFPWLNPTEKFTNTSENLSLVSLALADAAGVHPSCYAASLAHIVDAVVSSDGVMAVVADALASSVYRRKEQDVCHGEPSDGHATFSSVDGLQDGMRTGDIHRRDSEEEEEGEKDRGVLGCLRPGAHESGDTVCVGRTNGCAGVGSVGSVGSVGSEDAEYSSPLRKRRRMCSKDKE* # PASA_UPDATE: g13641.t1, single gene model update, valid-1, status:[pasa:asmbl_8111,status:12],[pasa:asmbl_8117,status:12],[pasa:asmbl_8118,status:12], valid-1 NODE_549_length_21425_cov_38.0955 . gene 6813 16285 . - . ID=g13641;Name=g13641.t1 NODE_549_length_21425_cov_38.0955 . mRNA 6813 16285 . - . ID=g13641.t1;Parent=g13641;Name=g13641.t1 NODE_549_length_21425_cov_38.0955 . five_prime_UTR 15768 16285 . - . ID=g13641.t1.utr5p1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 15051 16285 . - . ID=g13641.t1.exon1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 15051 15767 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 12208 14859 . - . ID=g13641.t1.exon2;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 12208 14859 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 11644 11952 . - . ID=g13641.t1.exon3;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 11644 11952 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 11106 11246 . - . ID=g13641.t1.exon4;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 11106 11246 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 10569 10832 . - . ID=g13641.t1.exon5;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 10569 10832 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 10201 10341 . - . ID=g13641.t1.exon6;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 10201 10341 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 9759 9932 . - . ID=g13641.t1.exon7;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 9759 9932 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 9367 9528 . - . ID=g13641.t1.exon8;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 9367 9528 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 8846 9025 . - . ID=g13641.t1.exon9;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 8846 9025 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 8412 8545 . - . ID=g13641.t1.exon10;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 8412 8545 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 7975 8101 . - . ID=g13641.t1.exon11;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 7975 8101 . - 1 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 7547 7706 . - . ID=g13641.t1.exon12;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 7547 7706 . - 0 ID=cds.g13641.t1;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . exon 6813 7324 . - . ID=g13641.t1.exon13;Parent=g13641.t1 NODE_549_length_21425_cov_38.0955 . CDS 6813 7324 . - 2 ID=cds.g13641.t1;Parent=g13641.t1 #PROT g13641.t1 g13641 MAPRKGATGRALYDFLGEAAGDLVFFKDQVVTDIVRIDADWCRGRMDRYEGIFPSNLVAYDSPPPLEGEDATAPVVEEKAKEPHAIANLDFVAEDAQELTVLKGDVVILTSHVDDNWFRGTLGGKSGIFPKMCVDVVVALPADMTDDVFKAKEAAKSSSLLSSDVGKKAASSPGAVAAAVAAVVSTPAPAPAPTPVAVAVTVAKVEDGVRIAIANVDFDASESTDLPFKAGDRVRVLRELDQDWSEGELGGKTGIFPTAFVTFSDEPPAAPTAIEPDPPKPSSIASKASVFSGAITSTITSTSTPSSTASLAQEQSVPVTLAAPVAPPTVAMEAPSESAPPSVLSAAKMWERRSSMTQVVSSSTATTPSKATASNAAESAATSYSQSSSSYASPTPAMQTPSASAKETPPVAPAIAPPAVTVAASEPVYVTPAHAVTATGMITFTAESSGDLPFDIGERIFVTGAVDSNWVKGSTGTAEGIFPRSFVAFDKPCARVAAAFDGAVDGEVPLDTNEVVAFVDRVDSDWSKVRRKDGKEGLAPLCFLDVWRDVPSAATAYASPSRPSQPPTTQASQSNLASPASTSSAPQKVPPARPPPPGRPPTFVGTSSTSAPIPIPSAQTQAPTTPQPFSRTSSRSSPSNSISGPSGGSPYAKSSAGDIGNPPPVTPPPKPAVNPYRRLSGSTGSPQSPKPQPPTPTASPLRQSSSASSVGSVTVGTPAPSSAPVVTSAVTASSVAPTTSTATAPQPSGSGRPLSIGKPPVPTTKPEAPRSRPAGSAPAQTTAANANGSQSSTVISDAPRSAPPPRPQSTPVGPTAPSTRPNGAGPTTATAAATATIGTQDQQQQTQQQQQQLQQPPATPQPFGAAKAKPPPPTSKPVFTQKALSGTIAAPLSSVSAPASTQPPSVSPYAAPAKKEPPPKPSVGPVASRPVSFAPGQAPSPHSAPPTPAQPPRRSSNGAIIPADAPAELPSVADAVARFQQKPAATSTAGSGRAPPPKPSVGPRAVSIVVSKSQPVLPSYPASASASASTSAAIAQSSSGSGRASFSAVSGGQDSTQRAAAPVTSIERQPSLKSQPKVVSAPIVATTAPSSVTNSVATSNEDIDPEWDEPLYEEIDRVDDRPQAATVPTPAPAPVELDPEQAAIEKKRRKAENRPRVVDEIVKTEADFLRDMSVLVEGYAAPLAEAGITLEDCSILFGNIHEVISVSQRLLESLQLTVAQPPSEQQIGACFLASADDIRRVYATYCRNHDDAVALIQQWESDPHKMALLRERQDAVRGQSGAWDLSSFLIKPVQRVLKYPLLLHQMLDCTYDTHVDYVWLTEALDKMRGVAANINEIKRRKDIVQKYTAPIDDGIGANVSKINLHSLKKKTGRIKQLTLQATGKATRTIDPIFEECDLRFRALERLARAVLRDVEAYVVCIPDVSSKEQLLADAVKLFYGDAFQRQEVNMYQAAHLLLSTQGLNDHIAIIKSRVVRPLYSLLDQFPNPTYLIRKRNDKLLDFDKWANKVQGTKDTAKLQIAQEALVAAQNDYNALNEQLLEELPRFVKLGESLVADSIRNFLKSLGLYYRDAVGQLAQLEESDFVARNVPIMERFYERELEAVRKLTRLTIMPQYFDRVFEASFSSLSSGPPQSNSEDAQRGKRERERAQSIEEIEKKLAELSKELQIEHRTRNGMETLLRTYETQPGFGDDKAVAELKGKLSACDTRISRLAKDVEKYRVKLESVHESRRQSIAARGLPPGYIPPATTTTAAKSSSASTGSTSASTPTKGTSSSLPASNASPAAYSVAEEVEEEDEFSDDPLEEEPLPDTAHDMNPPEQFYAMYDYVGKDRTELSFSADETLYVLQRVDQDGGLDWWLAQKADGTEGYVPSNYLAPCAQQSESAGETAC* # ORIGINAL: g13642.t1 original gene structure, not modified by PASA NODE_549_length_21425_cov_38.0955 AUGUSTUS gene 16956 21313 . + . ID=g13642;Name=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS mRNA 16956 21313 . + . ID=g13642.t1;Parent=g13642;Name=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 16956 17153 . + . ID=g13642.t1.exon1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 16956 17153 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 17327 17404 . + . ID=g13642.t1.exon2;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 17327 17404 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 17626 17909 . + . ID=g13642.t1.exon3;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 17626 17909 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 18297 18450 . + . ID=g13642.t1.exon4;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 18297 18450 . + 1 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 18738 18824 . + . ID=g13642.t1.exon5;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 18738 18824 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 19059 19160 . + . ID=g13642.t1.exon6;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 19059 19160 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 19396 19611 . + . ID=g13642.t1.exon7;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 19396 19611 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 19840 19950 . + . ID=g13642.t1.exon8;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 19840 19950 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 20290 20367 . + . ID=g13642.t1.exon9;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 20290 20367 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 20726 20773 . + . ID=g13642.t1.exon10;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 20726 20773 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 20922 21088 . + . ID=g13642.t1.exon11;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 20922 21088 . + 0 ID=cds.g13642.t1;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS exon 21247 21313 . + . ID=g13642.t1.exon12;Parent=g13642.t1 NODE_549_length_21425_cov_38.0955 AUGUSTUS CDS 21247 21313 . + 1 ID=cds.g13642.t1;Parent=g13642.t1 #PROT g13642.t1 g13642 MATIQQAIQTVASLETFQLHDDQPVVEAQSVAIEYEVSMDPNFDDRNAFIGAMSKFLEEARTQGNLNSVLENGKYYQALLYSWRSCSRAIPQVQSQDQANKVELYERTVEILDPEIRKLREFYSFQEHAVEAFCKEIKTLSIPERRKDYISETLLLTLGRMVNMFGVLDALKNMKACLNNDFSMFKRASGFLKSRTKPGEDEILENQRMASLAMFLANQNQITTTLKDQLEGIAGYDEVLADVVNLCADIYEQNLYVTPEEKHVMLKVMAFGLFLMDGVKSQANIYKNKKIRLERFGKLFKQLSVVPLYGDMQITLLSYIKRCPHFEESRWMAAAEQASEERGDRQDNIMLAASSQKPEHFRFIADLTIRLNDKKLREGNLTPAQARDLSAVVLRGFKLLAQWTALVNEVHCWKLSHPADKYTNRDCPENAEEYERAIRYNYNSEEKFALVELMSMIKGTAAILRRHKTVLVAAINQYLHAEVQDFMHVTLRELIRRTIKKKKKMLTREWTMCLRGSSCLKLAVILNVS* # PASA_UPDATE: g13638.t1, single gene model update, valid-1, status:[pasa:asmbl_8112,status:12],[pasa:asmbl_8115,status:13], valid-1 NODE_549_length_21425_cov_38.0955 . gene 2 2021 . + . ID=g13638;Name=g13638.t1 NODE_549_length_21425_cov_38.0955 . mRNA 2 2021 . + . ID=g13638.t1;Parent=g13638;Name=g13638.t1 NODE_549_length_21425_cov_38.0955 . exon 2 262 . + . ID=g13638.t1.exon1;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . CDS 2 262 . + 0 ID=cds.g13638.t1;Parent=g13638.t1;5_prime_partial=true NODE_549_length_21425_cov_38.0955 . exon 595 718 . + . ID=g13638.t1.exon2;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . CDS 595 718 . + 0 ID=cds.g13638.t1;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . exon 1015 1112 . + . ID=g13638.t1.exon3;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . CDS 1015 1112 . + 2 ID=cds.g13638.t1;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . exon 1528 2021 . + . ID=g13638.t1.exon4;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . CDS 1528 1662 . + 0 ID=cds.g13638.t1;Parent=g13638.t1 NODE_549_length_21425_cov_38.0955 . three_prime_UTR 1663 2021 . + . ID=g13638.t1.utr3p1;Parent=g13638.t1 #PROT g13638.t1 g13638 PQNLTPLAYNVTPQQYQALQQQQQQQQQQQQQQQQQQQQQQQQQQQLQAQPLQSSFQISSNGMAQGQSRRSATKAQVSQIQIPQQGMSMGMQAPSNASPRPLAAMVQREKSADNSIDPSDSDGGGGKKGGDIQERRLLKNREAAKECRRKKKEYVKCLEDRVRVLEAQNIALIAELKKLKGLVGAGSAPMMQAPGGRPMGGQLMQ* # PASA_UPDATE: g3929.t1, single gene model update, valid-1, status:[pasa:asmbl_6414,status:12], valid-1 NODE_3694_length_2939_cov_40.764 . gene 826 2830 . + . ID=g3929;Name=g3929.t1 NODE_3694_length_2939_cov_40.764 . mRNA 826 2830 . + . ID=g3929.t1;Parent=g3929;Name=g3929.t1 NODE_3694_length_2939_cov_40.764 . five_prime_UTR 826 961 . + . ID=g3929.t1.utr5p1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 826 1146 . + . ID=g3929.t1.exon1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 962 1146 . + 0 ID=cds.g3929.t1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 1282 1399 . + . ID=g3929.t1.exon2;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 1282 1399 . + 1 ID=cds.g3929.t1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 1594 1656 . + . ID=g3929.t1.exon3;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 1594 1656 . + 0 ID=cds.g3929.t1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 1947 2072 . + . ID=g3929.t1.exon4;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 1947 2072 . + 0 ID=cds.g3929.t1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 2494 2670 . + . ID=g3929.t1.exon5;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 2494 2670 . + 0 ID=cds.g3929.t1;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . exon 2801 2830 . + . ID=g3929.t1.exon6;Parent=g3929.t1 NODE_3694_length_2939_cov_40.764 . CDS 2801 2830 . + 0 ID=cds.g3929.t1;Parent=g3929.t1 #PROT g3929.t1 g3929 MDVDERPPSFADLLQQSMLLVSSLDEVTEMPTVQRNIEQIERASRDLLQKHARPGDGAALKGQYLLATHGIDPEESKRNLDALNLKTTFEPLEPVEDTDVQSYLRHEYDMLILTAIEEAKKNTIAEFNANHSRNMVNQWEAEKREILETLGRIPEAADFTQEATPIATGASDGPLFAVGRSSLNARMLAYLRVVRALNDHRISRRQFGVIAAFREAVSRIDDMRVGCIVVLR* # ORIGINAL: g3928.t1 original gene structure, not modified by PASA NODE_3694_length_2939_cov_40.764 AUGUSTUS gene 95 284 . + . ID=g3928;Name=g3928.t1 NODE_3694_length_2939_cov_40.764 AUGUSTUS mRNA 95 284 . + . ID=g3928.t1;Parent=g3928;Name=g3928.t1 NODE_3694_length_2939_cov_40.764 AUGUSTUS exon 95 284 . + . ID=g3928.t1.exon1;Parent=g3928.t1 NODE_3694_length_2939_cov_40.764 AUGUSTUS CDS 95 284 . + 1 ID=cds.g3928.t1;Parent=g3928.t1 #PROT g3928.t1 g3928 STYPARQGRQPLPPGKRAGDPWRPLLNSRVPDPLHRCNHSQIPATCGCAQLSPRCGPRSECKV # ORIGINAL: g11600.t1 original gene structure, not modified by PASA NODE_1416_length_11474_cov_39.4334 AUGUSTUS gene 5564 6655 . + . ID=g11600;Name=g11600.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS mRNA 5564 6655 . + . ID=g11600.t1;Parent=g11600;Name=g11600.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 5564 6655 . + . ID=g11600.t1.exon1;Parent=g11600.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 5564 6655 . + 0 ID=cds.g11600.t1;Parent=g11600.t1 #PROT g11600.t1 g11600 MGDRALEILEKRCGLDLPGIPTMPVDNFPTEYSFSAAASACGTPALRARLYELVSDLRHKPNEYFWGAVQTAAIVRALRDTSLSPPQSAWLSPGGPPVREAAIYEARAVQAAAEVFADMRRLGYDPSTVNQAFLFKLLQRQPWDRNVPPSDATPMPRLDINSVVQRIADAAGTIPDVRLITSAIIEHGRTGNIGMAMSLFKDVVGGRVSGVAPTSILFNGAALACSLTCDLSSAIDLLDTLEEWIEKSKPSTICGDSPSAAPSVAGMAAQPIVVQEELVLYLLRVAVAARHIGLVARLLQIRQKNDVWLGTTQLVKLSAEINRAPEPFRRAVLDIFRKTRTRLPAGQNEQRTNSLPTDADALH* # ORIGINAL: g11599.t1 original gene structure, not modified by PASA NODE_1416_length_11474_cov_39.4334 AUGUSTUS gene 3420 4634 . + . ID=g11599;Name=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS mRNA 3420 4634 . + . ID=g11599.t1;Parent=g11599;Name=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 3420 3816 . + . ID=g11599.t1.exon1;Parent=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 3420 3816 . + 0 ID=cds.g11599.t1;Parent=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 3979 4405 . + . ID=g11599.t1.exon2;Parent=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 3979 4405 . + 2 ID=cds.g11599.t1;Parent=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 4547 4634 . + . ID=g11599.t1.exon3;Parent=g11599.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 4547 4634 . + 1 ID=cds.g11599.t1;Parent=g11599.t1 #PROT g11599.t1 g11599 MFQRLACLPAWGAQGASRLTRSACNGCAHADRITRWQQTSSAKYVSVTAGHVDESGSSAAAQLHETNDATQSPTRQQLHRQQQPQQQQQQQQQQQQQQQQKHYELQRKRNRTRDSHDIDALTQLLRPRHENLGDHTPSPLLKSSVVLMRIAGRSQQRSSLGSPPPPISVFVPVSATPLTPHGPLAGAQPKAPGGTRPTHPHPPSTTGHATQQRPPNNTKESSPSAPKNVHTKMNAAAVPKIAKATDTLASSSEPLRAPANSDVNNAHMVRTMHSHQVLLRLQDAGTKRDWMRAMHLMNEYEST* # PASA_UPDATE: g11601.t1, single gene model update, valid-1, status:[pasa:asmbl_1520,status:3], valid-1 # PASA_UPDATE: g11601.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1521,status:3], valid-1 NODE_1416_length_11474_cov_39.4334 . gene 6969 10480 . - . ID=g11601;Name=g11601.t1 NODE_1416_length_11474_cov_39.4334 . mRNA 6969 10480 . - . ID=g11601.t1;Parent=g11601;Name=g11601.t1 NODE_1416_length_11474_cov_39.4334 . five_prime_UTR 10368 10480 . - . ID=g11601.t1.utr5p1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 9741 10480 . - . ID=g11601.t1.exon1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 9741 10367 . - 0 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 9213 9414 . - . ID=g11601.t1.exon2;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 9213 9414 . - 0 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 8724 9001 . - . ID=g11601.t1.exon3;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 8724 9001 . - 2 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 8352 8480 . - . ID=g11601.t1.exon4;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 8352 8480 . - 0 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 8084 8182 . - . ID=g11601.t1.exon5;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 8084 8182 . - 0 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 7450 7720 . - . ID=g11601.t1.exon6;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 7450 7720 . - 0 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . exon 6969 7225 . - . ID=g11601.t1.exon7;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . CDS 6984 7225 . - 2 ID=cds.g11601.t1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . three_prime_UTR 6969 6983 . - . ID=g11601.t1.utr3p1;Parent=g11601.t1 NODE_1416_length_11474_cov_39.4334 . mRNA 6969 10480 . - . ID=g11601.t1.1.5b6be70a;Parent=g11601;Name=g11601.t1 NODE_1416_length_11474_cov_39.4334 . five_prime_UTR 10368 10480 . - . ID=g11601.t1.1.5b6be70a.utr5p1;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 9741 10480 . - . ID=g11601.t1.1.5b6be70a.exon1;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . CDS 9741 10367 . - 0 ID=cds.g11601.t1.1.5b6be70a;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 9213 9414 . - . ID=g11601.t1.1.5b6be70a.exon2;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . CDS 9213 9414 . - 0 ID=cds.g11601.t1.1.5b6be70a;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 8724 9001 . - . ID=g11601.t1.1.5b6be70a.exon3;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . CDS 8724 9001 . - 2 ID=cds.g11601.t1.1.5b6be70a;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 8084 8480 . - . ID=g11601.t1.1.5b6be70a.exon4;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . CDS 8268 8480 . - 0 ID=cds.g11601.t1.1.5b6be70a;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 7450 7720 . - . ID=g11601.t1.1.5b6be70a.exon5;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . exon 6969 7225 . - . ID=g11601.t1.1.5b6be70a.exon6;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . three_prime_UTR 8084 8267 . - . ID=g11601.t1.1.5b6be70a.utr3p1;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . three_prime_UTR 7450 7720 . - . ID=g11601.t1.1.5b6be70a.utr3p2;Parent=g11601.t1.1.5b6be70a NODE_1416_length_11474_cov_39.4334 . three_prime_UTR 6969 7225 . - . ID=g11601.t1.1.5b6be70a.utr3p3;Parent=g11601.t1.1.5b6be70a #PROT g11601.t1 g11601 MSTWLSGLAGKAEALLENIDNVAKVSLKEGGIASDEDHTNRDGFLRDDGSRFESEYGRGGYAVDEDRANGHGDGAYGGVYGSRDDPVSHSMTAGGRPTFDAVDGGLAAGASTLELENKLLKSEIKALNSELSSLTQRAKVASAGNAEVRRLLETLERKHATTETELRAARTADLEHRATVSVLREQMTQLHELVRTKEARVVELEEEKRTLSRTHAMSSGTHFGALDAAQIELRTERDTCTQLRSDLARLQARADADAHESRALITQLQRDLEDARQRLSEALGHLRTAKSELTAVSREFGDYKARATKVLQTKEKIIDDLRAARDTDAPSGGLAGAADFVEAQRERDQLREELVEARGEIEALRLAMEESERQMANDADASAASLREVEAALAEEKRRNADSEAEVSSLAQDLAQMRAVASRQRQTYDGYIKDRDIEIERLRGQISHRSSHAGEQRGLEDRLRALTESLIEKQTQIELLNAEKTSLQLQLESEMEKCAALALRYQHRSGMPGDGAYIDLLDDDGRFGQGVTWSHGGIQARLRELGLDSSVRQGMRLLAIVFGILGTVARRVGRFLRAYPHVIVIYVVLYIFFTFFVMSRSAPDATVNAKPNGAQ* #PROT g11601.t1.1.5b6be70a g11601 MSTWLSGLAGKAEALLENIDNVAKVSLKEGGIASDEDHTNRDGFLRDDGSRFESEYGRGGYAVDEDRANGHGDGAYGGVYGSRDDPVSHSMTAGGRPTFDAVDGGLAAGASTLELENKLLKSEIKALNSELSSLTQRAKVASAGNAEVRRLLETLERKHATTETELRAARTADLEHRATVSVLREQMTQLHELVRTKEARVVELEEEKRTLSRTHAMSSGTHFGALDAAQIELRTERDTCTQLRSDLARLQARADADAHESRALITQLQRDLEDARQRLSEALGHLRTAKSELTAVSREFGDYKARATKVLQTKEKIIDDLRAARDTDAPSGGLAGAADFVEAQRERDQLREELVEARGEIEALRLAMEESERQMANDADASAASLREVEAALAEEKRRNADSEAEVSSLAQVRPWHLALAGSSVCIVCDAALHCCIDV* # ORIGINAL: g11598.t1 original gene structure, not modified by PASA NODE_1416_length_11474_cov_39.4334 AUGUSTUS gene 1317 2389 . + . ID=g11598;Name=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS mRNA 1317 2389 . + . ID=g11598.t1;Parent=g11598;Name=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 1317 1350 . + . ID=g11598.t1.exon1;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 1317 1350 . + 0 ID=cds.g11598.t1;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 1508 1629 . + . ID=g11598.t1.exon2;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 1508 1629 . + 2 ID=cds.g11598.t1;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 1750 1888 . + . ID=g11598.t1.exon3;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 1750 1888 . + 0 ID=cds.g11598.t1;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS exon 2139 2389 . + . ID=g11598.t1.exon4;Parent=g11598.t1 NODE_1416_length_11474_cov_39.4334 AUGUSTUS CDS 2139 2389 . + 2 ID=cds.g11598.t1;Parent=g11598.t1 #PROT g11598.t1 g11598 MANDATLVGLSGIGEQLLLGLDNCIRMKVCVLQAEDRVATAQRHVARTRLLPNPDMVVVKRAEEAHQTARKQMAETESALLHQFSMLITLVMPFLTEPEFASFCGATALGWRGFGFKAARVQAALALDRARGATAGHVRAQTALVSGLVSELNRAAVAHLEADIAGYNASAASGGSSVADV* # ORIGINAL: g14195.t1 original gene structure, not modified by PASA NODE_4210_length_2023_cov_31.6242 AUGUSTUS gene 118 1676 . - . ID=g14195;Name=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS mRNA 118 1676 . - . ID=g14195.t1;Parent=g14195;Name=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS exon 1206 1676 . - . ID=g14195.t1.exon1;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS CDS 1206 1676 . - 0 ID=cds.g14195.t1;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS exon 903 995 . - . ID=g14195.t1.exon2;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS CDS 903 995 . - 0 ID=cds.g14195.t1;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS exon 471 563 . - . ID=g14195.t1.exon3;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS CDS 471 563 . - 0 ID=cds.g14195.t1;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS exon 118 241 . - . ID=g14195.t1.exon4;Parent=g14195.t1 NODE_4210_length_2023_cov_31.6242 AUGUSTUS CDS 118 241 . - 0 ID=cds.g14195.t1;Parent=g14195.t1 #PROT g14195.t1 g14195 MDISGIVRCNDVTCEGPNERAFAIDVAGNVPRRFVLASADWKDLVARIEGILRHRSSSPSLRARNSLGVSADGLVAKCSCPPDPILGDSFNTESFASRDLLSIPRELARQLTLIEHGLFRQITAADTLRKITGTKNAGRPSPAGSRTVEAFISRFNDVSLWVETMVLEKSTTVEERVYRITQFIKVAKFCHELSNFNGMMEVISGLSSTPVRRLKKTWEAVSKEARATFAALDEHMTTKGNFKTYRSLIRNSTLPALPYF # ORIGINAL: g12226.t1 original gene structure, not modified by PASA NODE_816_length_17362_cov_39.5339 AUGUSTUS gene 3763 5340 . + . ID=g12226;Name=g12226.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS mRNA 3763 5340 . + . ID=g12226.t1;Parent=g12226;Name=g12226.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 3763 4431 . + . ID=g12226.t1.exon1;Parent=g12226.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 3763 4431 . + 0 ID=cds.g12226.t1;Parent=g12226.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 4723 5340 . + . ID=g12226.t1.exon2;Parent=g12226.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 4723 5340 . + 0 ID=cds.g12226.t1;Parent=g12226.t1 #PROT g12226.t1 g12226 MRTTAMHRLQVSVHAFKAATKQRVTNGVHGQSMMSVAVHPHLSLRFHTGTHAECRPPAPTALVGEPVDVRSVRGQVEDAQDARASLARWVRRLECAGVAEPVESAAHLLVEVRDRRRRAERQRAAAAAGDSCSARAQPPMPDSRLPPPVRLSQALSWGRLGGRGRAGAAMATALSAEEAAEYNAMCARRLHHEPVQYIVGHWDFHGLRVAVRPPVLIPRPETEDLVRHILQHAVHAIDAHAPIRVLDVGCGTGCIALALLSSLPRATATALDVSEAAVVLARDNARSLGLSTRFHAVCADIADADNISDNISATAEGGPFDIVVSNPPYIPSARLHSLDRDVRCFEDARALDGGPDGLRVARSIVLRCGAQVERPLLHAGGRLWLELDAEEQVQSLAAWAEGAMPRMRMESTATDFAGIRRFCCLVAV* # ORIGINAL: g12229.t1 original gene structure, not modified by PASA NODE_816_length_17362_cov_39.5339 AUGUSTUS gene 11021 17299 . - . ID=g12229;Name=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS mRNA 11021 17299 . - . ID=g12229.t1;Parent=g12229;Name=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 16802 17299 . - . ID=g12229.t1.exon1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 16802 17299 . - 1 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 16535 16637 . - . ID=g12229.t1.exon2;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 16535 16637 . - 1 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 16286 16442 . - . ID=g12229.t1.exon3;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 16286 16442 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 16010 16150 . - . ID=g12229.t1.exon4;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 16010 16150 . - 2 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 15705 15778 . - . ID=g12229.t1.exon5;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 15705 15778 . - 2 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 15331 15510 . - . ID=g12229.t1.exon6;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 15331 15510 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 14889 15053 . - . ID=g12229.t1.exon7;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 14889 15053 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 14675 14725 . - . ID=g12229.t1.exon8;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 14675 14725 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 14452 14540 . - . ID=g12229.t1.exon9;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 14452 14540 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 14169 14304 . - . ID=g12229.t1.exon10;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 14169 14304 . - 1 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 13762 13903 . - . ID=g12229.t1.exon11;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 13762 13903 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 13416 13594 . - . ID=g12229.t1.exon12;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 13416 13594 . - 2 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 13222 13282 . - . ID=g12229.t1.exon13;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 13222 13282 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 13064 13131 . - . ID=g12229.t1.exon14;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 13064 13131 . - 2 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 12814 12912 . - . ID=g12229.t1.exon15;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 12814 12912 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 12495 12682 . - . ID=g12229.t1.exon16;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 12495 12682 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 12338 12404 . - . ID=g12229.t1.exon17;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 12338 12404 . - 1 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 12166 12223 . - . ID=g12229.t1.exon18;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 12166 12223 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 11972 12047 . - . ID=g12229.t1.exon19;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 11972 12047 . - 2 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 11659 11881 . - . ID=g12229.t1.exon20;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 11659 11881 . - 1 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 11165 11545 . - . ID=g12229.t1.exon21;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 11165 11545 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 11021 11086 . - . ID=g12229.t1.exon22;Parent=g12229.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 11021 11086 . - 0 ID=cds.g12229.t1;Parent=g12229.t1 #PROT g12229.t1 g12229 LRPPGSTAARKQPPRLVLNPLYGLPRACESLDQFHELVVPLVTRLGPHISADPSVLAKLVRIFTAFLKRIRDVVAAGDTQNATSQETERRLRVTIESLLETVLLPALSLTPSNAGLFSEMWDLLKNFGYVTRYKLYAGWKATGYAQTPELILRRAEIANQTRRILRRVTKENTKLSGRLLGKVIHTAPMIVFDEILMKVQVYDNFVAPLVDSLRYLTEMPYDALVFSIIELLSSPDKERLKGDGNSISGWLQGLALFGASITRRYSVELTGLLRHVASQLSTEKSYDLLVLKELVNKMAGIDYNEEVSDAQLEALGGGPTLRQEAGTFVQARNIAASQARLKNSLLSSGFALPLAVLLGQQRNVLVYKQTDLTHLKLIGNVYDQCTETLIQYAEFLSAFLSPAEYDALIPSFGVLVSDFHLEADVAFALFRPKFKHQIAQLMQSPELTAKHANMDELFAAAMSIAMAPLIEATAAIFDTKTLIDISPSLYVTFWVLSQYDLSVPRARYDTEIKRQKQLIVAIDENRDETQQMTASQRKKERDRLSAVVVRLQDDLKAQETNRRLVAKWLETEKAGWLGGASNAALKSRHRDSVTQFIQLCVYPRASFNPLDAVYAARFVPELLNLRVENFAFLSFFDKIFSNVKFSLDASTENEARRFGRFLNELLSVLSRWYSDKAAYEKEAAHQHGLTNRLAPVSYDDFKKLMMKWHLKMGKRFTLLLTSKEFMHIRNAILCLIQVSGNFPLFRRFALSLERIVDTIKKEDEREDLKLIASRQVLYHALLVSLKPKLLADELTKSVKASADPKADTKGADTKPAKPEPSKTTVATEPERPKPELRRAADAASKPALPAAKAETGAVDTERPAPRAAKRPQSPAGDGKPGIAAAVVAPSQTQKPVDGGDAVPDAKRRRVDKDKEVTKDEGRHKDAVGEREEREREKDGKGRSERDRKESKSDARESRVPQLHQAIRQVAAQSDRDAKEREKEKEKEKEKERDKDKEDKKDDRKDRDDKKEKXXXXXXXXXXXXXXXXXXDKDGKDHKEKSERKRERTSEENKERDVKRRREEECE* # ORIGINAL: g12228.t1 original gene structure, not modified by PASA NODE_816_length_17362_cov_39.5339 AUGUSTUS gene 9166 10280 . + . ID=g12228;Name=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS mRNA 9166 10280 . + . ID=g12228.t1;Parent=g12228;Name=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 9166 9363 . + . ID=g12228.t1.exon1;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 9166 9363 . + 0 ID=cds.g12228.t1;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 9455 9558 . + . ID=g12228.t1.exon2;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 9455 9558 . + 0 ID=cds.g12228.t1;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 9645 9747 . + . ID=g12228.t1.exon3;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 9645 9747 . + 1 ID=cds.g12228.t1;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 9882 10114 . + . ID=g12228.t1.exon4;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 9882 10114 . + 0 ID=cds.g12228.t1;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 10220 10280 . + . ID=g12228.t1.exon5;Parent=g12228.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 10220 10280 . + 1 ID=cds.g12228.t1;Parent=g12228.t1 #PROT g12228.t1 g12228 MQNAPQADTGAVAGAMPAETTGVGGPKGVLADYRRHQRAAAEQRKDDYARLVKEAGRMSLRGGGSEAQAEPSADEDEEAFMREYREKRLREMQQRQKADKGPRFGTYELMTSATFVDQIEDEPETVPVIVHLFQEGVASCALMSAALSHLARKHPYAKFRRMRAEEASRGFDEDSLPTLLVYRAGELVGNHVRVADSIGERFAPDEVEDFLVRHGFLERLVYQVSDDSTDTD* # PASA_UPDATE: g12225.t1, single gene model update, valid-1, status:[pasa:asmbl_9520,status:12], valid-1 NODE_816_length_17362_cov_39.5339 . gene 301 3430 . + . ID=g12225;Name=g12225.t1 NODE_816_length_17362_cov_39.5339 . mRNA 301 3430 . + . ID=g12225.t1;Parent=g12225;Name=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 301 1086 . + . ID=g12225.t1.exon1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 301 1086 . + 0 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 1293 1494 . + . ID=g12225.t1.exon2;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 1293 1494 . + 0 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 1644 1790 . + . ID=g12225.t1.exon3;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 1644 1790 . + 2 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 1887 2090 . + . ID=g12225.t1.exon4;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 1887 2090 . + 2 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 2209 2507 . + . ID=g12225.t1.exon5;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 2209 2507 . + 2 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . exon 2641 3430 . + . ID=g12225.t1.exon6;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . CDS 2641 3354 . + 0 ID=cds.g12225.t1;Parent=g12225.t1 NODE_816_length_17362_cov_39.5339 . three_prime_UTR 3355 3430 . + . ID=g12225.t1.utr3p1;Parent=g12225.t1 #PROT g12225.t1 g12225 MGDAAGGQLSPLSSPAARVASLSTLSPNTSRAATPSTPMTIPTISFDIDHDVDGTITPISPSINGGSVGSAPTTPETARRKHRSISASIHNITGSIKEMFSAARTVSMPATPAHGPGHGASHLHLAPADSPSSTKKQGLSPSSSRGQVNTLSSSLTASGWGVDAAIASPRTTPKAKGWRRVPLFPFVRRRNSPDSRSDGFIEEENARTRRTSLEVLSAMARAAEGAESSAGGTANQWDETLRQMQILWMGNRKELELARNAEEETVPLRRLLEFVPLVSVHVTRLAPREMPVLRQFALVEATTFASDITMPRSCIDDGFKGRRTTGTKKIDVPVAVPCSAFGVALDVALDRDARRIPGRRMSTMPLIVEQTVAYLEKEAVSVQGIFRVSGSAKRMKQLRALYESTDDIDLSSFSAHDVGGILKTYLRELPEPLLTAELYQSFLVSGGLSGEEQLRAQRLLCLLLPTCSRNVLEAVLNLLGHIAQHAGEGGAGNKMDTYNLALVFGPNILHRPSAQRGHLEMEHMQEQLAVVGVVKSLIERREGLFQVPGELIAKVVFEVGDLECELAQSVAFRPWLARLLVDAFPRALNTSRTHTPGNVSLAASPVPGRSPSNPDVAAAGSPTATSQPPSPASASPMPTGITGSDTDSALLRPTRGPSVRARPRSASAVPVPSSDLNSTFARMLASRSDTSATIGEEDNSVQTPQSPAVACSVPPSPVITVVADEDCNGDEKSTRKALPSGEPSGASVGAASLAADTTVPTDPLAAAPTVRADEILADFETTV* # ORIGINAL: g12227.t1 original gene structure, not modified by PASA NODE_816_length_17362_cov_39.5339 AUGUSTUS gene 5797 6069 . + . ID=g12227;Name=g12227.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS mRNA 5797 6069 . + . ID=g12227.t1;Parent=g12227;Name=g12227.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS exon 5797 6069 . + . ID=g12227.t1.exon1;Parent=g12227.t1 NODE_816_length_17362_cov_39.5339 AUGUSTUS CDS 5797 6069 . + 0 ID=cds.g12227.t1;Parent=g12227.t1 #PROT g12227.t1 g12227 MQATGGATMNGEHHKPKYATQVKGAATPSHSPTHHRHDPHAVRPRRRPAGPAHPDAHLPAAARQPLPGRPRANTHRDHQPAVHALLAQDQ* # PASA_UPDATE: g4953.t1, single gene model update, valid-1, status:[pasa:asmbl_2178,status:12], valid-1 NODE_1622_length_10149_cov_40.9998 . gene 793 1544 . + . ID=g4953;Name=g4953.t1 NODE_1622_length_10149_cov_40.9998 . mRNA 793 1544 . + . ID=g4953.t1;Parent=g4953;Name=g4953.t1 NODE_1622_length_10149_cov_40.9998 . five_prime_UTR 793 794 . + . ID=g4953.t1.utr5p1;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . exon 793 915 . + . ID=g4953.t1.exon1;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . CDS 795 915 . + 0 ID=cds.g4953.t1;Parent=g4953.t1;5_prime_partial=true NODE_1622_length_10149_cov_40.9998 . exon 1148 1215 . + . ID=g4953.t1.exon2;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . CDS 1148 1215 . + 2 ID=cds.g4953.t1;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . exon 1339 1544 . + . ID=g4953.t1.exon3;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . CDS 1339 1527 . + 0 ID=cds.g4953.t1;Parent=g4953.t1 NODE_1622_length_10149_cov_40.9998 . three_prime_UTR 1528 1544 . + . ID=g4953.t1.utr3p1;Parent=g4953.t1 #PROT g4953.t1 g4953 CLRDFYILYRLYFVSSVLNETSGRKQVASDRQIPSGLSALESAVLHTASDGELLVRLGGNIEEMSNNLSAMFKSISSQSVEVNELSKLVDEHGDFFRAWNLFVQKGAMINWGSNRREAPAPQVDQ* # ORIGINAL: g4957.t1 original gene structure, not modified by PASA NODE_1622_length_10149_cov_40.9998 AUGUSTUS gene 8729 9817 . - . ID=g4957;Name=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS mRNA 8729 9817 . - . ID=g4957.t1;Parent=g4957;Name=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS exon 9617 9817 . - . ID=g4957.t1.exon1;Parent=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS CDS 9617 9817 . - 0 ID=cds.g4957.t1;Parent=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS exon 9228 9328 . - . ID=g4957.t1.exon2;Parent=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS CDS 9228 9328 . - 0 ID=cds.g4957.t1;Parent=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS exon 8729 8978 . - . ID=g4957.t1.exon3;Parent=g4957.t1 NODE_1622_length_10149_cov_40.9998 AUGUSTUS CDS 8729 8978 . - 1 ID=cds.g4957.t1;Parent=g4957.t1 #PROT g4957.t1 g4957 TLFTVDVRPAQDTSKDPITVGRCCEFVVDVRRVGPFPVRTALLYEVALDSGLWAVVGRRKGLLPLDDATHVQLKVSLLALNAGRLPVPDIELSVADPPPSMLRNAPDSSSAINLRSNSLASTSVSSSGGLSLSIAPDAVSTAGGGDASDGDSPYRSFSIVHKGRGRQVTVLPKEQSYPTVLVA* # PASA_UPDATE: g4956.t1, single gene model update, valid-1, status:[pasa:asmbl_2179,status:3], valid-1 NODE_1622_length_10149_cov_40.9998 . gene 6197 8547 . + . ID=g4956;Name=g4956.t1 NODE_1622_length_10149_cov_40.9998 . mRNA 6197 8547 . + . ID=g4956.t1;Parent=g4956;Name=g4956.t1 NODE_1622_length_10149_cov_40.9998 . five_prime_UTR 6197 6267 . + . ID=g4956.t1.utr5p1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . exon 6197 6403 . + . ID=g4956.t1.exon1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . CDS 6268 6403 . + 0 ID=cds.g4956.t1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . exon 6517 6587 . + . ID=g4956.t1.exon2;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . CDS 6517 6587 . + 2 ID=cds.g4956.t1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . exon 6725 6943 . + . ID=g4956.t1.exon3;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . CDS 6725 6943 . + 0 ID=cds.g4956.t1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . exon 7184 8102 . + . ID=g4956.t1.exon4;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . CDS 7184 8102 . + 0 ID=cds.g4956.t1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . exon 8340 8547 . + . ID=g4956.t1.exon5;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . CDS 8340 8461 . + 2 ID=cds.g4956.t1;Parent=g4956.t1 NODE_1622_length_10149_cov_40.9998 . three_prime_UTR 8462 8547 . + . ID=g4956.t1.utr3p1;Parent=g4956.t1 #PROT g4956.t1 g4956 MVLDINHFREENGGNPEIVRDSQRKRFADVEIVDRIIAKDKEWRQMRFRVDTLNKMGNLCSKSVGEKMKNKEPVGDSDVVPVGISDNLTGLTLDGLKALTVTQIKAVKKLVEEDVKKTEASMEVVEKDRFSMLKQIGNLIHETCIISKDEANNGIERLSGDVTSRKKYSHVDLIVMIDGVDVDKGTATAGNRGYYLKGGAVFLEFALINYGLHLLGGKGYTPLYTPFFMNKEVMQEVAQLSQFDTELYKVTGKASEKAEEGGTDEKYLIATSEQPIAAFHRDEWMDVKDLPKRYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITTPHDNISWQMMDEMIGNSETFFQALGIPYRVVNIVSGELNNAAAKKLDLEGWFPGSGAFRELVSCSNCTDYQSRALRIRFGTSKKLDKAPEFVHMLNSTLCATTRVICAILENNQTETGVTIPEVLRPYMPAQFREFIPFVKRAPIDEENEKAAAKKN* # PASA_UPDATE: g4955.t1, single gene model update, valid-1, status:[pasa:asmbl_2181,status:3], valid-1 NODE_1622_length_10149_cov_40.9998 . gene 4058 5768 . - . ID=g4955;Name=g4955.t1 NODE_1622_length_10149_cov_40.9998 . mRNA 4058 5768 . - . ID=g4955.t1;Parent=g4955;Name=g4955.t1 NODE_1622_length_10149_cov_40.9998 . five_prime_UTR 5595 5768 . - . ID=g4955.t1.utr5p1;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . exon 5324 5768 . - . ID=g4955.t1.exon1;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . CDS 5324 5594 . - 0 ID=cds.g4955.t1;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . exon 4603 5179 . - . ID=g4955.t1.exon2;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . CDS 4603 5179 . - 2 ID=cds.g4955.t1;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . exon 4058 4416 . - . ID=g4955.t1.exon3;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . CDS 4299 4416 . - 1 ID=cds.g4955.t1;Parent=g4955.t1 NODE_1622_length_10149_cov_40.9998 . three_prime_UTR 4058 4298 . - . ID=g4955.t1.utr3p1;Parent=g4955.t1 #PROT g4955.t1 g4955 MAFSIKFASLRGSGPRAFDDFRLRLVRIVLPARLVRKYSTTDGESGGGKHKRGSGLDPRDRNGDPSVIQQAADHARVASTPPQTLKDLKLGLFYDERVLFPTDRLWTFRIADEARLRMITAAIATHGVFGHIGGFHMNMLTTREHDRPGVRAIGRAVSPDVGCMMRIVQHDRLPSGALEIQCSAVQRIRVSDAEWTRGSHWRASVMAIDDEPMEDEDELRAIENMERIKRSVSGWKTRHEGGHPLWTQHRRNITWLLGSRPGIAGIDWTTYSYRVASIVSDMRKGHYSRDKEHERLLAMLSTTDVEDRLRLVIEHMDDNYD* # PASA_UPDATE: g4954.t1, single gene model update, valid-1, status:[pasa:asmbl_2180,status:3], valid-1 NODE_1622_length_10149_cov_40.9998 . gene 1663 3669 . - . ID=g4954;Name=g4954.t1 NODE_1622_length_10149_cov_40.9998 . mRNA 1663 3669 . - . ID=g4954.t1;Parent=g4954;Name=g4954.t1 NODE_1622_length_10149_cov_40.9998 . five_prime_UTR 3560 3669 . - . ID=g4954.t1.utr5p1;Parent=g4954.t1 NODE_1622_length_10149_cov_40.9998 . exon 2858 3669 . - . ID=g4954.t1.exon1;Parent=g4954.t1 NODE_1622_length_10149_cov_40.9998 . CDS 2858 3559 . - 0 ID=cds.g4954.t1;Parent=g4954.t1 NODE_1622_length_10149_cov_40.9998 . exon 1663 2653 . - . ID=g4954.t1.exon2;Parent=g4954.t1 NODE_1622_length_10149_cov_40.9998 . CDS 1874 2653 . - 0 ID=cds.g4954.t1;Parent=g4954.t1 NODE_1622_length_10149_cov_40.9998 . three_prime_UTR 1663 1873 . - . ID=g4954.t1.utr3p1;Parent=g4954.t1 #PROT g4954.t1 g4954 MADHSHPPTASGASQQSSSSSPDSSHVGRRFSLLHLNRNKPRSGQKNVLPNFMHFGIDAAMWADISLENDDDQGQSIDDLLSHSSSKLLNKYSTADIMHQLDCHGIVTKLRAMGIDNIHIIFELADPFVHKVTIKYIPTTPLHTPTADHTSAVDAERSDVQKAELMICEIYLRRLRSAANLKAMTATDEHVPGGHLVHGLLTAFQDFDMVAVEWMRMQNPTKQFSKERSALPGQDHPSLGIGREVEEMLADMATRSARDAITNVPLYFHNALFYSSPGYKFVDPEFEGKFRTLVADVYPDIKEHGLSAVSFAVVHGRLFCDGRRAVVPATAATADLASKVGAVTLSASHGHSKIASSEHTSNAHGLAAVSENGEDRVHHSVAVPPATTANGANGSGSTHRGSLAGMFGVHRHIESIAERRANAVRVLWLAEEMMRPLSLRMKNYFEGKEYRDILAKNTSSGVFFIDWDASLPSNDDWAHARKLRLVNTLADFH* # ORIGINAL: g12889.t1 original gene structure, not modified by PASA NODE_5289_length_923_cov_32.6285 AUGUSTUS gene 307 809 . + . ID=g12889;Name=g12889.t1 NODE_5289_length_923_cov_32.6285 AUGUSTUS mRNA 307 809 . + . ID=g12889.t1;Parent=g12889;Name=g12889.t1 NODE_5289_length_923_cov_32.6285 AUGUSTUS exon 307 452 . + . ID=g12889.t1.exon1;Parent=g12889.t1 NODE_5289_length_923_cov_32.6285 AUGUSTUS CDS 307 452 . + 0 ID=cds.g12889.t1;Parent=g12889.t1 NODE_5289_length_923_cov_32.6285 AUGUSTUS exon 614 809 . + . ID=g12889.t1.exon2;Parent=g12889.t1 NODE_5289_length_923_cov_32.6285 AUGUSTUS CDS 614 809 . + 1 ID=cds.g12889.t1;Parent=g12889.t1 #PROT g12889.t1 g12889 MVIEYAEFGDLRHYLVDGGSSLTVADLLCFSIDIARGMEHLAKSQVVHRDLAARNVMVVAGPRPPNPQEKGWKLSAKGSVIAKIADFGLSRETAASGDYYHAKTRRKLPIKWM* # ORIGINAL: g3019.t1 original gene structure, not modified by PASA NODE_5868_length_692_cov_29.6937_potentialcontaminant AUGUSTUS gene 162 692 . - . ID=g3019;Name=g3019.t1 NODE_5868_length_692_cov_29.6937_potentialcontaminant AUGUSTUS mRNA 162 692 . - . ID=g3019.t1;Parent=g3019;Name=g3019.t1 NODE_5868_length_692_cov_29.6937_potentialcontaminant AUGUSTUS exon 162 692 . - . ID=g3019.t1.exon1;Parent=g3019.t1 NODE_5868_length_692_cov_29.6937_potentialcontaminant AUGUSTUS CDS 162 692 . - 0 ID=cds.g3019.t1;Parent=g3019.t1 #PROT g3019.t1 g3019 HDDADHYHNYSHDDNHDANHHNHDADDNHHDANDDDDDADHYHNYSHDDNHDANYNNHDADDDHDDADLDHHTDNNDNHADDNNHSNHYNHVHHHSNFHHNHVDDADLNDNPNDNDNHADFNDNPNNDHNVDHDAHHDHHANHHYHNSDHHDDSHHNHYHHNHINHHHDYHSHHHR* # ORIGINAL: g5836.t1 original gene structure, not modified by PASA NODE_2747_length_5249_cov_38.145 AUGUSTUS gene 173 3212 . + . ID=g5836;Name=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS mRNA 173 3212 . + . ID=g5836.t1;Parent=g5836;Name=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 173 382 . + . ID=g5836.t1.exon1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 173 382 . + 2 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 503 639 . + . ID=g5836.t1.exon2;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 503 639 . + 2 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 846 961 . + . ID=g5836.t1.exon3;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 846 961 . + 0 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 1187 1266 . + . ID=g5836.t1.exon4;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 1187 1266 . + 1 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 1427 2040 . + . ID=g5836.t1.exon5;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 1427 2040 . + 2 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 2247 2327 . + . ID=g5836.t1.exon6;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 2247 2327 . + 0 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 2517 2613 . + . ID=g5836.t1.exon7;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 2517 2613 . + 0 ID=cds.g5836.t1;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS exon 2812 3212 . + . ID=g5836.t1.exon8;Parent=g5836.t1 NODE_2747_length_5249_cov_38.145 AUGUSTUS CDS 2812 3212 . + 2 ID=cds.g5836.t1;Parent=g5836.t1 #PROT g5836.t1 g5836 QRCHVSPHVPVSLPLPVSVPVPVPVPVPVPVPVPVPLPVPMPVPVPVPVPVPVPVPVPVPVSVPVYAIESIYLTDLTFIADGNPDTVITPTGDELIHFQKYRLISRVIEEIQQYQHKPYALKKETPLYDQLAAWQPSMTTEAAYTRSLELEPRDGSVATMSRRRSLSAPNIDVISAAAAKAAADAERKPSGSMRSLMKAADGLSKIFTLKKKTSLKGRVKASDAFATMSDGESSVPGSPALARSQSVNSHKRTSKMDDRHRSRTVADNIGAVQLPKWDEGNDSETAHTTMEQRKGSDASTTPSIQREDEFGAAGEIPGAVDAAGDTDDVASGGEGDRTPRPRSDGSGGRRHGDSSRFAIVGISQLIQLDSVLSDAEADGDSGRLSDLSDVRNHIRSMRLGDDHGYRRRNSNYDVDEDSLHLRLNDDGSITHSRRGSNISTTSLGESRSRSLSDSDVSRLSYSSSRFGRGAVGADTPEVLDDLLGTLNLTSLRPCLASKGINCVRALASLNAEDLHGLRVGSSDVCETLATAASARLASMETASKTLASVGRHLTDSSSNNSDDDETDACRELSETQL* # PASA_UPDATE: g5837.t1, single gene model update, valid-1, status:[pasa:asmbl_4925,status:12], valid-1 NODE_2747_length_5249_cov_38.145 . gene 3602 5051 . - . ID=g5837;Name=g5837.t1 NODE_2747_length_5249_cov_38.145 . mRNA 3602 5051 . - . ID=g5837.t1;Parent=g5837;Name=g5837.t1 NODE_2747_length_5249_cov_38.145 . five_prime_UTR 5050 5051 . - . ID=g5837.t1.utr5p1;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . exon 4933 5051 . - . ID=g5837.t1.exon1;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . CDS 4933 5049 . - 0 ID=cds.g5837.t1;Parent=g5837.t1;5_prime_partial=true NODE_2747_length_5249_cov_38.145 . exon 4428 4537 . - . ID=g5837.t1.exon2;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . CDS 4428 4537 . - 0 ID=cds.g5837.t1;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . exon 4092 4143 . - . ID=g5837.t1.exon3;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . CDS 4092 4143 . - 1 ID=cds.g5837.t1;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . exon 3602 3847 . - . ID=g5837.t1.exon4;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . CDS 3668 3847 . - 0 ID=cds.g5837.t1;Parent=g5837.t1 NODE_2747_length_5249_cov_38.145 . three_prime_UTR 3602 3667 . - . ID=g5837.t1.utr3p1;Parent=g5837.t1 #PROT g5837.t1 g5837 SAAIASKLAAEKHGLVVLRESIEDDANSSTRYIVIAREQVIPAHHVRSKTSVAIHLKNQPGSLFKALAAFALREINIAKIESRPSARSGSLHAAARHWEYVNYIDAESGLGSPVMQNALQNLSEFATSVRVLGSYPVFQPKLQSNAFGPFGL* # PASA_UPDATE: g9485.t1, single gene model update, valid-1, status:[pasa:asmbl_8140,status:12], valid-1 NODE_552_length_21374_cov_41.5956 . gene 229 7262 . + . ID=g9485;Name=g9485.t1 NODE_552_length_21374_cov_41.5956 . mRNA 229 7262 . + . ID=g9485.t1;Parent=g9485;Name=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 229 369 . + . ID=g9485.t1.exon1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 229 369 . + 0 ID=cds.g9485.t1;Parent=g9485.t1;5_prime_partial=true NODE_552_length_21374_cov_41.5956 . exon 512 667 . + . ID=g9485.t1.exon2;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 512 667 . + 0 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 922 1132 . + . ID=g9485.t1.exon3;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 922 1132 . + 0 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 1306 2521 . + . ID=g9485.t1.exon4;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 1306 2521 . + 2 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 2695 2811 . + . ID=g9485.t1.exon5;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 2695 2811 . + 1 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 3098 6317 . + . ID=g9485.t1.exon6;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 3098 6317 . + 1 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 6462 6617 . + . ID=g9485.t1.exon7;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 6462 6617 . + 0 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . exon 6839 7262 . + . ID=g9485.t1.exon8;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . CDS 6839 7075 . + 0 ID=cds.g9485.t1;Parent=g9485.t1 NODE_552_length_21374_cov_41.5956 . three_prime_UTR 7076 7262 . + . ID=g9485.t1.utr3p1;Parent=g9485.t1 #PROT g9485.t1 g9485 EDWSGFVFAVESDVIDDGREAEMLAAAVQSGCRQRFQVITKESIVGVVKDTKGSDLGATLRGHLDAGTDIPPDMFARLLRARLLQIKSDAIERRAAMFKGDAGSGADNGGDRGKKGKPSAKTGSSKKRPETGKPVEEVPEVPLVDKDSGKKKLKLKKPTTKTQETVKTIDDEPKDGPDTYYLIQGFSSAQGLATALDLGVSIDALVRLNHSPEQLASTDNVNAAFSPFWADFTKLLESAGPGSPLRDLVTLTASAPIVEVPPKKDPRDFLSLPLFNEIVGSIYALVDKKREHAHYIERLRVVEVPESYGNPDMALYRRLMDRVPDSAVGVGFLLDCMLEQVNVNARAQSPDQRRADSVVGGTIGYAHSSVGWLAGDPFDLARECSETVSAYCDDLSTPMLLGTDVGGIGSVSASGQVDASGVALPMQQQQPSQASSQSGVSVFRHGDAISRRLAGVDPGLARHVERVERKMLAMHPASDTARQYLHFYRTANSELPPRERAIAKREFQSMCAGLTATETEAGLLQLAVERLLSEGPLASSECVSEERRGIERFDKTVFQQVLADALVTRPKASARYDPDADVLLLALHGGFGNSPSRTLEERVEAGLATRIGFRNFLHHVHGTPWNTPGCVGYDIGDSVVRLDEVDARMYLPDGGQILSTRQKFPWDQNPIVRTSVVSEGHVISLHANCVGGPLALPKSGASLARKERTNSATASLADGGVLSVASDGTSFFTTSDGVMVDLSCPALVRISTPRRVRGAKDDLNATRPVEVQRTLLQDGTIARYFADTTMEIIYPSGAVCARGDDGVWITTVPDGRRELRSSDGVRNESLTKLNCSTSRDFHTGETMSAREDGVVVITRKCGTVVTEHADGTRVTRFGARSTHVLPGTVRVECAGLPSVEFDPPLPTPHKDEDAAPDATDATADPTADAAQPLVLSSSSGATSAPAALSTTAVQPAAADNYVPAPASPVAGSRSASTDPSRTASVANLTLKTFTPIPERPAPVAEEVEPVARSILCANGTRIDSDIVRGRLVLTATTMGLILGYDRTRGEFDYIPPAQPAKDVAAQRERLFSDDTASLVGMYRLNVTVGSVRSLSIDGRVYSVSEDGAASVSQYAPQPTTTADDSVDAEEDGTLTAPIAFAFPEVRGNERNAPRVFAVHHDGSGFELLRSDDITRYVAYATTDPSAVILRERHDGNLPADPIAALLGVEESIAALTVPEQLRGRYYAESIIIPGGLRSTAWRAYEKYETVTVPRAIEAAFFALRKSVSPEKMSQIAANLERYRQLVEEREAEAQAAMEAAALAEAASASTSEDKPADGNAIQVPAGQETSAPVAPVDQPTPSKSHREGGSPVRGGLRRRFSVSASAPLPAEGIDASVRYADEIEHRRMAAALAAALAREPGVAERIRNNWRKRALPATFASRDKRQQHPPLIDPARIGLRDPIMRYFESEEGRSWIEGRSDVHAASARNNEDVGDNHGDDHCVIGDIAASLVDEALASVAQHVSDGREEHSDASDGGSAMVQREGAEKNGTRLQLDIDDARSFDDDALSILTPRSDGRPMTPTPHSLNNRQALPPIASARANEDAHGDVASVDRMSESPILSQSSTNNVRAATRVSSPGSARSRPRSLDFDVAGSPRKSKVKLPVALLTTKANASPNERHSAIEDSGRRKLQTSSVVQASVVPRGFEVYPDRVEFGILHAGTICRVPITLKNVGLDTARFKILAPPTSSGIRVLFNAGPLAAGMQTQLQVELSAASSAGAIYQEVEIVTESDIFRIPVSATVRPRPLPHTIHSGAAQSLGSPITPMSPDQHSRVVLR* # PASA_UPDATE: g9486.t1, single gene model update, valid-1, status:[pasa:asmbl_8141,status:12], valid-1 NODE_552_length_21374_cov_41.5956 . gene 8476 10332 . - . ID=g9486;Name=g9486.t1 NODE_552_length_21374_cov_41.5956 . mRNA 8476 10332 . - . ID=g9486.t1;Parent=g9486;Name=g9486.t1 NODE_552_length_21374_cov_41.5956 . five_prime_UTR 10295 10332 . - . ID=g9486.t1.utr5p1;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . five_prime_UTR 10007 10027 . - . ID=g9486.t1.utr5p2;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . exon 10295 10332 . - . ID=g9486.t1.exon1;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . exon 9899 10027 . - . ID=g9486.t1.exon2;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . CDS 9899 10006 . - 0 ID=cds.g9486.t1;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . exon 8885 9309 . - . ID=g9486.t1.exon3;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . CDS 9151 9309 . - 0 ID=cds.g9486.t1;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . exon 8476 8634 . - . ID=g9486.t1.exon4;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . three_prime_UTR 8885 9150 . - . ID=g9486.t1.utr3p1;Parent=g9486.t1 NODE_552_length_21374_cov_41.5956 . three_prime_UTR 8476 8634 . - . ID=g9486.t1.utr3p2;Parent=g9486.t1 #PROT g9486.t1 g9486 MGGAHKAFGNLARGKHFITFALSPFEQRAFANVLTKGIANVVRRVSRSAWDVVPGLGTGYAIYYWGNKEHDRLARKQPGQFDHEDIKH* # ORIGINAL: g9487.t1 original gene structure, not modified by PASA NODE_552_length_21374_cov_41.5956 AUGUSTUS gene 10937 21172 . + . ID=g9487;Name=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS mRNA 10937 21172 . + . ID=g9487.t1;Parent=g9487;Name=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 10937 13267 . + . ID=g9487.t1.exon1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 10937 13267 . + 0 ID=cds.g9487.t1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 13486 13654 . + . ID=g9487.t1.exon2;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 13486 13654 . + 0 ID=cds.g9487.t1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 13955 16807 . + . ID=g9487.t1.exon3;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 13955 16807 . + 2 ID=cds.g9487.t1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 17148 20126 . + . ID=g9487.t1.exon4;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 17148 20126 . + 2 ID=cds.g9487.t1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 20344 20438 . + . ID=g9487.t1.exon5;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 20344 20438 . + 2 ID=cds.g9487.t1;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS exon 20681 21172 . + . ID=g9487.t1.exon6;Parent=g9487.t1 NODE_552_length_21374_cov_41.5956 AUGUSTUS CDS 20681 21172 . + 0 ID=cds.g9487.t1;Parent=g9487.t1 #PROT g9487.t1 g9487 MSQAGTPPRGPPPSHPSTPPHPKTPLALAHGVSSPPQQQEPPQQQSDSTKQQSKKEVLPFLVEVNDNGFFPAHLSIEEGDIVEFNWKDCGRLHFIREIYVAGGQLVPVKGGPTGFQPSPAATGTFLHVFQTRGNFRYSSDGVVPGTFCNVTVRQRAPEAIAVHPDGTFQYEHLVIWEGSSIAWHLEKNSPPATASASPALIARTILPVNVVRREGVPIIKSARSGTPFVPPTPSDDLHHEHAFRSVGVFSFCAVTAEEASCDSLGPLSSRRRGSVLTVVVRARSKQTRVRIGAECFEPQTVTIRAGDSVRWTWTSSDCAHSVQETVTCGGDRDGRVVAKPNGITSAPIVGTTGAFIHCFNAAGVHYFATPGFKNRFCTVVVRPRPSEETVYVDTDGSFSQKSVTLLQGDRLWLDCDHSEAVYQVSSGTVATRSLMQSQDGATLLQTAAAAGCIHSGTALTNGGSFCVSYSHPGAYRIASESSAGQKSVVVIVKQRPREKDVRVDDSGFFPKRLVVSCGDRLWFSWTGRDSNSDTDSIQQYRQRTSVFTLGEIMSKGSVPDSDAGASSARVLTQSPSRMNYNNVVQVGVDASVGFTSGGGQDGSGAFAKVFSEPGVFYYENEAAGLGKLGCVAVVPRARDVRVELSETGPKPRLACLSVGDYLWFDWISSPLSHGVQSVSVDVSGKPTDTPEFTSGAAVAGGSVFGTSFDSPGIRFYRDCGASSRGDVATVLVDPRQPPECVLVSSEKGFEPANLTVGKGRGVLFRWDDAKAPQNIIQVTMDNDGEPKRVRRGFKSGHVLPKGEYFNVFNKVGTFTAVSSGAVGHRFTLTVADKVTPPAVPTIQPLREGIAYTITPFVISSPDNDVSVYYTIDGSIPSIAGAGSETSPTRKVAPSEHVTLPVGLHIVRAIAFCELRGFSATMTSGVVHVRTLDAPLPVAPTPTLLGEVSESTATIAWQWPGSLAEISARSAIMSCVQIVVNDKQYEFVGVDRSSAEIGGLTPGTTASVRLQFSLLPVYGQSPASDALLIDVPVGEDHNAVKTEALANDVVVGVINALAGALLDSFIDAALDERIAAIAVLEAAQLAEVERRKAEQEKEEKERLDREREEKERLDREREEAERLERERVEQEKIDRERKERDQLERDRVARELREQERLGRDREERERLDREREERERLDREREEKERLDREREEQERLEKERLAEEAAQRETEERERREREENERAEREESGRARIDLEDAEKTESERAEAQRERHAARICDDAIACASEVVMSDIISAAQAAHDEEDDRRHVITEEALRVAVATVADEMLSAAEDLVTAELVDAAVRVEAATKADAIAEDVVGAVAESLAGTELISAAIDAAVSQAPDPPAPIEHVTAVVVPETVEAAAPAEMEAAPVPIPPKEEVLVPLLPKEEAAVPALPTPAVQAAPIPPKEVTPPPSPPREKKVREPVLPNEEPVASKDPIPPRPVPPPPKRERVHLLPPSQLRVTWPSPTSASVSFEEPMLAITDEPARIAEYRLYVNGVAAQTVDFGTASVVVSGLKPRETYAFALSSLAFPDDERFLTSEKSRPLSVVCPDVPDAPSARVEMSADGYCTVMWAEVTAYGDTKVTGYSVAIDGVTVAPSDKDGDALSVGLTSGKQLRRGQRAHVIDSDAYSVGTHTVTVTAMCDYGTGASTSTPCQFESRGPTAPTVTAVRIGRHDAAFDIIPPVVGRRATVLGYRVTWTEAGLNKLSTRTIDVSTDKPSFVVEGIEPGTEYCIEVSTKTDKGGDAFVPMMTHTFASCAALLAPQPPTVLIDSATSSSVTFSWTLGPLSSERALPETYDITVNDSHVATVPSSTDSYTITGLPAGTDVYIRVVGVPDPKSRAPRSQTSMVVRGTTLGSVRPDLQAMSVKGTKATLGWTAAKSVGSAILKYYALSVWEASSMDIASFDADSAKEPVFVKAYVDPLERTYAVEGLSVGRMYHATLTAHFADIVGNALPDLDARSPHVTFETPAPPEKPRVTLSWVSSTSALIEWQRPIEYGGARVSYYRVELNGQQFAGNLKPVNTSCVLTGLRPRTHYDVTVTALVSSGLADPAKSDVLYVDTLPSDVLCVRASGMGMGSLSASWAALVPSGRAALTGYRVTCCMEEESTEGSADDAALRRLRSARGSADSVQSVTDLPTEISVEVGADQLAHTFVGLMPRRFHIVSVCALLESGGHVESAPARVRAPSLPDAVTVTYKFASGERVGIYWSDPEEYGGPDVVGFRVHVNGHIAIDAVPARAREADIPAEPLTEYSICVEVRCHGLPSGVAGPMSAPFKITTPGTEPSLDLREQWCDGESLSVAWARPHIPPGWTLGHYEVEWSSIVAPAVKTAVVAGKQRTFVIRDCAPGKPHFVVVNAVPTGGGEVLRSKQLVVQTAARPAAPTVTVGYAGPDKISLRWTKAVEYGCAAVAGYAVAVDGDPLFTSTSADTTTYDWASCCPGHTYTFTVRALTAGHPVGDGIASDPLVVVCPRGSTPHFRRVASTRVESIRVQWFDPVLPAGKVLAGYEITCTRPSDDNGGGDREGMGGALAAQVAHAPPGDGIYEFNFLMPSYEYVIRAIAIASDGTRFPSNVLRGRPPVRPTAPELHVEPASTTARARAERGICDMLAERERLMQKLFKLDVLAMNPGRHKGSSRRLFVEDLQRKEGYPRLIDLECRLNKALVEFEEKHTGYSTVGLRWRRAVDDRDAVVTGYQIYLDGVPFGKELSESSDRVTISLCVDRPSYAISIAATTAHPVGNGEPSNTVVVETSDFQPYYFYCLNHVHRRNASWPIGGCCSYWQTFRHELAERPVPEGEPVFGSTPYYSTVVASIRSGTTQAGAASGGAVLAPIRHHPTVTVPPQALAALSGATPKFLSGGLKTHDRLYLMRPRQDAATFGPKGTVFDLPARKTIDEMEEDYQQFRNLTAMHNNKAPDARVVDVATGAKTRLLSGVEGKAGLIVFWTQW* # ORIGINAL: g8266.t1 original gene structure, not modified by PASA NODE_1890_length_8719_cov_45.1691 AUGUSTUS gene 1875 4074 . - . ID=g8266;Name=g8266.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS mRNA 1875 4074 . - . ID=g8266.t1;Parent=g8266;Name=g8266.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 2723 4074 . - . ID=g8266.t1.exon1;Parent=g8266.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 2723 4074 . - 0 ID=cds.g8266.t1;Parent=g8266.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 1875 2499 . - . ID=g8266.t1.exon2;Parent=g8266.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 1875 2499 . - 1 ID=cds.g8266.t1;Parent=g8266.t1 #PROT g8266.t1 g8266 MRRGISRFVRRLSPFNLAFLFYIFVAVVFFFGVHLYSQIGGNAGSLPGRRPPALGKDSKPWAWLDSGSGRKERSADNPGSTVHICLASDLNYLVGVFALLNSTIQHCSRPHDLVFHFVTQGEPDPTVRTSLATVFPEVGFDFVTLDTAFVPAAKVWAAYRSSSLSKPIVFARYVLPTMFPQLDRLLYLDQDVLITTDIIPLYNVDLEGYPLAAARLCRDSALFAKQLEMREPELAGFNPYECSLNNGVLVYDMAMWRRSNYSAQLFEWTRLNNKKKIYKLGSQPPFNLVFHGNYKVLDKTWNVMDIAGLKDANGPITVPSSEFSKGAIIHWNGQLKPWMCEEGHYSELWRQYFPNFRAYVGEAYDSDRKLCDSVVITDLDLSIHDARSRFTVVITSHMRVDNLATIVHHLRRSDYVKEIILVWNDATRPCPKEVAGFVRCFPQPDNFVHNRFMIWNEVTTEGVLQHDDDVIIPLHELEAAFKIWRRNTDHMMGFEPRVVRCASADRSANCSYSFIMKEGYFDLVIGKMFFVANRYQEMFVRRPSLLDLTTRVPCEDLAMNYLIGEFTHKSPLWFKANLTAIESRLYAGLSQGIQSGDWRILRRECVNELYRFFGRHTVIPKTSRYSFTPDKSRVLKLPIELKESWCSDTLGGRICRQP* # ORIGINAL: g8265.t1 original gene structure, not modified by PASA NODE_1890_length_8719_cov_45.1691 AUGUSTUS gene 643 1003 . - . ID=g8265;Name=g8265.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS mRNA 643 1003 . - . ID=g8265.t1;Parent=g8265;Name=g8265.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 893 1003 . - . ID=g8265.t1.exon1;Parent=g8265.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 893 1003 . - 0 ID=cds.g8265.t1;Parent=g8265.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 643 780 . - . ID=g8265.t1.exon2;Parent=g8265.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 643 780 . - 0 ID=cds.g8265.t1;Parent=g8265.t1 #PROT g8265.t1 g8265 MDTFGMPEWLGGAKKELQETEEWKSLTAHMFDAIQQQLAENKIMFFTDLSDAEKILFTDRAAKIVQKSEAYRRMLVQVGWAL* # ORIGINAL: g8267.t1 original gene structure, not modified by PASA NODE_1890_length_8719_cov_45.1691 AUGUSTUS gene 5460 8482 . - . ID=g8267;Name=g8267.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS mRNA 5460 8482 . - . ID=g8267.t1;Parent=g8267;Name=g8267.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 8413 8482 . - . ID=g8267.t1.exon1;Parent=g8267.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 8413 8482 . - 0 ID=cds.g8267.t1;Parent=g8267.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS exon 5460 8137 . - . ID=g8267.t1.exon2;Parent=g8267.t1 NODE_1890_length_8719_cov_45.1691 AUGUSTUS CDS 5460 8137 . - 2 ID=cds.g8267.t1;Parent=g8267.t1 #PROT g8267.t1 g8267 MNMGDDIDHAKYCLCEVHTKGAEESRELKDDEIPLIVMVRWTAGKTYAEGDKRIYFIEKGTKVSLSTKETSSLAMPEAALAQSAERARLLSQGSKPSSRAGGSGSPSPVPKTGDDAVSTTPIKHDGDNKAEDGKTSNASADAPSTSTTPARKSSASAESPSSVARLRPPSIITASSPSPAAPEVSPGASLGGARSRLSVDGSSSPRGSVAPASPQPQRRASKENGATSPLPERKLSGGAPSLLPVGFGLKSPRDSVVVPIEKASPSSPFPALRKVGEETTSAVPSPSAQLTSPTVLLPSSTAALSTEPAVGAETSSTPRTAKDLFGAKGEKSPAIKRASESAASPSQSEDAKEEAVTSVTSPASAGVQVAKPSPANKLAALKTASEPAKSPEGGKLFPAALKPTISEAKGDSKAPTADESVPADILKGDKSPNSRVKPASDADKVVQDGKTSTASVDKIDAPVKEEGKSVGAAAKTWGAPKAASGTGVNTATADVAPAPSVTTVNGNKTSEPPAKTDSPAPVKSWGVVKAAVNSPAPVKASEPASASASASVSASKEASNGKAATTTETVKTDSPSPAPVKSWGNKAASTEASKPAAGGTKADTPAKAESSAPVKSWGATKTVGDGAKTEAGTPAAKSVGGAVETNDAPAKPDSPAPVKSWGAAKTASEVGKSSTADTAATAAAAKPSSGTTVKTSDPPAKTNSPAPVKSWGVVKAAVNSPAPVKASEPASASASTSASASKEASNGKAATTTETVKTDSPSPAPVKSWGNKAASTEASKPAAGGTKADTPAKAESSAPVKSWGATKTVGDGAKPEAGTPAAKSVGGAVETNDAPAKTGSPAPVKSWGKGKPAADASAAATAKPTVGGPSKAEAAPSSAPAADKGADGAPVAKGEADAASGPVDFKSRLKAVNKA* # ORIGINAL: g9863.t1 original gene structure, not modified by PASA NODE_845_length_16886_cov_40.7239 AUGUSTUS gene 11423 12437 . + . ID=g9863;Name=g9863.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS mRNA 11423 12437 . + . ID=g9863.t1;Parent=g9863;Name=g9863.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 11423 11502 . + . ID=g9863.t1.exon1;Parent=g9863.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 11423 11502 . + 0 ID=cds.g9863.t1;Parent=g9863.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 11654 12437 . + . ID=g9863.t1.exon2;Parent=g9863.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 11654 12437 . + 1 ID=cds.g9863.t1;Parent=g9863.t1 #PROT g9863.t1 g9863 MNLEYDSDASTASGKMRTSVNRTLQRRYRLRPSPLVHYDGMESPLRRHRHASRESSVAASDSAVEGTEWLSLLSPHLHNNAPETPTSAAATDGQGKAGPDRKRKRFAALPSPLSANTTPVSPSKRRRVRSAEDEYLSNAVVVSNGYDEDSAGGADLEFSFNAPLTPSSPTVCDAHPGSQPPADTTTEGMSPVAGSGPATVESVGAASIRPSMSFSTFVNKALIFAASALSVSASGINRVHSGVVSRARGIPSWIARFQYLLPHDRMYARHVARLRMIERETFSRHAL* # ORIGINAL: g9861.t1 original gene structure, not modified by PASA NODE_845_length_16886_cov_40.7239 AUGUSTUS gene 162 5532 . - . ID=g9861;Name=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS mRNA 162 5532 . - . ID=g9861.t1;Parent=g9861;Name=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 5529 5532 . - . ID=g9861.t1.exon1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 5529 5532 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 4991 5283 . - . ID=g9861.t1.exon2;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 4991 5283 . - 2 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 4222 4764 . - . ID=g9861.t1.exon3;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 4222 4764 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 3819 4098 . - . ID=g9861.t1.exon4;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 3819 4098 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 3580 3698 . - . ID=g9861.t1.exon5;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 3580 3698 . - 2 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 3149 3307 . - . ID=g9861.t1.exon6;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 3149 3307 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 2820 2981 . - . ID=g9861.t1.exon7;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 2820 2981 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 2550 2644 . - . ID=g9861.t1.exon8;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 2550 2644 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 2082 2193 . - . ID=g9861.t1.exon9;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 2082 2193 . - 1 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 1757 1862 . - . ID=g9861.t1.exon10;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 1757 1862 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 1489 1661 . - . ID=g9861.t1.exon11;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 1489 1661 . - 2 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 998 1222 . - . ID=g9861.t1.exon12;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 998 1222 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 490 683 . - . ID=g9861.t1.exon13;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 490 683 . - 0 ID=cds.g9861.t1;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 162 240 . - . ID=g9861.t1.exon14;Parent=g9861.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 162 240 . - 1 ID=cds.g9861.t1;Parent=g9861.t1 #PROT g9861.t1 g9861 MGAATLATLSDDLDGLLDDNELPEGLATDALMQHEETHDAPDSAVLAIEARHIEGQSLLDEFMAGEARNSEDGADLTLSKIDILLQSGDIGRAQARVIHDLFDQQLRAKFRFPPFVCKSMLSWWSTAGNAPSARRIFDYMRTHGHQIDLHDYACLVDAYANEDNMDALAAVLKEMRSAGFELAHMCRAHAMHPQRAAYVETQIASLVPGFVFHGRALESDAAANLGPAIRYLPLGEAEGESSATSPSPQPPSTEAAEEATEEVDETGEQVAFRHYRRGQKEGKEDEMLTGLASLLKSMESFEDGSHTPEALQWSLETRTIELARKRYLEDVDMVMKTGRAADLPMMRRLVAKWHTATTAVISREQQKIKSEYKVSDINGYTHSKKGLTPDQQEYGPFLTTLSAPNLASITLSVLVGTLFGTPENGTPTGPLVRIVGKRVYSTYVTDRVKTYRRGRESSGDAEAVKMLERVYADFNRLMRASHTTPIRGREKDIWQGLRVKYPDFFRDHNIPEWPDSVVLKVGAVLIKHVLDHAKLYPLDKDGGEAFGVVKNVEDKAFYQSYMYDNGKARGLIKFNPKLVDIVKKEGSTSFNMLLDPKMLPMVVPPIPWTSYNKGGYLVSSATGKMFSFCHWTAFPNDLLGAVLRVREGGGQVRALKEAGKSLEPVLDAINSLQRVAWRINTRVLDISTEVWNKGGDESLEIVPLADIPEPPVPAQLELQDLKTRYHHLRAKRAVRQRNAEMHSERCDLQYKFVVAHFFRSRKFYLPHSLDFRGRAYPIPPYLSHMGGDLTRGLLLFDEAKPLGEEGFKWLKIHLANNAGADKLSLKDRVRFADEHMDDAIDSARDPLG # PASA_UPDATE: g9862.t1, single gene model update, valid-1, status:[pasa:asmbl_9652,status:12],[pasa:asmbl_9655,status:12], valid-1 NODE_845_length_16886_cov_40.7239 . gene 6731 10234 . + . ID=g9862;Name=g9862.t1 NODE_845_length_16886_cov_40.7239 . mRNA 6731 10234 . + . ID=g9862.t1;Parent=g9862;Name=g9862.t1 NODE_845_length_16886_cov_40.7239 . five_prime_UTR 6731 6835 . + . ID=g9862.t1.utr5p1;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . five_prime_UTR 6949 6988 . + . ID=g9862.t1.utr5p2;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . exon 6731 6835 . + . ID=g9862.t1.exon1;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . exon 6949 7433 . + . ID=g9862.t1.exon2;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . CDS 6989 7433 . + 0 ID=cds.g9862.t1;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . exon 7650 10234 . + . ID=g9862.t1.exon3;Parent=g9862.t1 NODE_845_length_16886_cov_40.7239 . CDS 7650 10234 . + 2 ID=cds.g9862.t1;Parent=g9862.t1 #PROT g9862.t1 g9862 MVHATSRGASNGTRAATKPVGPAPTDEQIRLAKLTHTEDDGTHLSREQQNMIKEVASATQRDHELVTSMLLDCNWDVDAATLSLLDDDKVKEWKTSDAKKRQKRPQYSNGHGQYGQYGHSDANGNGRAPRESRGDRPADRADRADRAKGPRGAGPQGARSGRAEGTVQIHSVPQQQSAQQQSADASAAAHVPTTGSWTNGPPANIKLQAAAAAAAESQSAKIHAAHHAHALQQQQAQAQAHAHTHAHVQHSHSAVATTSSSSPVHVEAPVVAVPTQPAAPTWADKLKKQPAPKPTPTPAPAPVAAAPAHTHQHEQQPQQQPTTAAQAPSADASEHHHHAHAEVASAQQSQPEGAAAEKSGEGKEQRKKRGGRGRGGDREDRRKEAAAGGAAAAEESQAHQQQQQAAPSASESAAPAPTAEADASNAAAAEPKEDGKRSRKDRAAAPVDGAKPERRTVATAPAAAKPKKVLAQPVSIQFPASGEAEEESFVFGSFGVSNAAPAPVGALSAAKSPALKAASPVAAPAAPASPLATPAAPVAELQAEPAAPAPVAAQLPPAQQPVAVAQQPLQAEPAVAQQQQQPTVAQQQQQQQQTQHVAPVQYDAVAAHHMVPAVQSAQQQQASVLPHAAQQQMQQRMVPPTRGQQMPYAMPVELVDPSLAYYQMGPLFNPAMMPSYPSPYESDMSRPMYYGESYQAQQPARDAYVVARDGKFSQDGAVGATGAAGATAQAQGQAAQALPQGQHAAHAAQQPHMGQQGPYPGVPGGYGAYGGMNPYTNYGYPTYNYGHFQHHGNYKPMVPSYAKGAGAGNAPAPHAGGYQPVSGMQQTQQTQPQGQPQGQPQHHVHGGSYMQHQQVQQGGQGVNMFEDYAEPQAPAATVAGSAYKGYGQVSAQSQAGQQQAVPVQQQGQMGGYGGHHAHHAKAAGETGGYQGYNKQQQQQQQQQQQHSAYANTGNSAGAGASDGYGRGYQNSGWGNSQFNNHGGNGGNANYQNYGRQAQQHQWAPQQPNQ* # ORIGINAL: g9864.t1 original gene structure, not modified by PASA NODE_845_length_16886_cov_40.7239 AUGUSTUS gene 13163 14212 . + . ID=g9864;Name=g9864.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS mRNA 13163 14212 . + . ID=g9864.t1;Parent=g9864;Name=g9864.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS exon 13163 14212 . + . ID=g9864.t1.exon1;Parent=g9864.t1 NODE_845_length_16886_cov_40.7239 AUGUSTUS CDS 13163 14212 . + 0 ID=cds.g9864.t1;Parent=g9864.t1 #PROT g9864.t1 g9864 MSTTTMNAVAIRNYGNSDKLEAVVLPVPTPGAHDVLVKVAAVSVNPVDRKKRQNFGAAFDEATPFDQPLVLGWDASGTVTAVGSEVSLFSVGDEVFFAGSLIRPGSNAEYTLVDERIAAKKPKSLSHAESAVIPLVALTAWEALVDGMGIPIPSVASAHSSKTKSILIIAGAGGVGSLAIQIAKRVLGLRVIATASRPESRKFCIDNGADEVISHAAPLAEGLKSIGLSGVDYIFCTAKLADYIDQSVEIANPSGKIAAIDSDDLKPFDLSRLKLKRLTFHFELMFTRPIFGYELERQNEILSEVSRLLDAGVLKTTLTKTYAFNAQNLRQAHVDIESNSTIGKIALAL* # PASA_UPDATE: g9865.t1, single gene model update, valid-1, status:[pasa:asmbl_9653,status:3], valid-1 NODE_845_length_16886_cov_40.7239 . gene 14308 16749 . - . ID=g9865;Name=g9865.t1 NODE_845_length_16886_cov_40.7239 . mRNA 14308 16749 . - . ID=g9865.t1;Parent=g9865;Name=g9865.t1 NODE_845_length_16886_cov_40.7239 . five_prime_UTR 16449 16749 . - . ID=g9865.t1.utr5p1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 16278 16749 . - . ID=g9865.t1.exon1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 16278 16448 . - 0 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 15810 16078 . - . ID=g9865.t1.exon2;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 15810 16078 . - 0 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 15539 15598 . - . ID=g9865.t1.exon3;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 15539 15598 . - 1 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 15384 15430 . - . ID=g9865.t1.exon4;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 15384 15430 . - 1 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 15069 15234 . - . ID=g9865.t1.exon5;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 15069 15234 . - 2 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . exon 14308 14954 . - . ID=g9865.t1.exon6;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . CDS 14555 14954 . - 1 ID=cds.g9865.t1;Parent=g9865.t1 NODE_845_length_16886_cov_40.7239 . three_prime_UTR 14308 14554 . - . ID=g9865.t1.utr3p1;Parent=g9865.t1 #PROT g9865.t1 g9865 MSEMGDNAVVGRVESPDEWVRVTPLDVPPRSEPLTDAQIARVAGEQSSWTVFGVVAYPVLAVGSALYTVGSYIVWPFTRTPAPLADQPRPTAQPPSVVRLIGHPDAVARNMTPRDAHGSKNDLQMAVVNNGVRVSPQPSKIVQSSWDDIYPQLATGDVILFHGEHCLFSEIVEIGTSSLYSHVGIVLSPPHFFNAPGDVGKSLLMFESGLEDGIKDVEDNTNKFGVQIIPFGLDYVNKYVGKVYVRRLLDAGTMRSYGQEHHDELNSRLRVAHDHVHGKPYDCNPIDFLRAKLRRALMGDVLQTRAFFCSALVAYLYHSMGLIEFGDAGIEGWDLYAPKDFSCDADSTPGLALGVVLEGIQHEILREPLP* # PASA_UPDATE: g531.t1, single gene model update, valid-1, status:[pasa:asmbl_2590,status:12], valid-1 NODE_1774_length_9306_cov_43.9897 . gene 513 6063 . - . ID=g531;Name=g531.t1 NODE_1774_length_9306_cov_43.9897 . mRNA 513 6063 . - . ID=g531.t1;Parent=g531;Name=g531.t1 NODE_1774_length_9306_cov_43.9897 . five_prime_UTR 5902 6063 . - . ID=g531.t1.utr5p1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 5878 6063 . - . ID=g531.t1.exon1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 5878 5901 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 5499 5594 . - . ID=g531.t1.exon2;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 5499 5594 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 5088 5231 . - . ID=g531.t1.exon3;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 5088 5231 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 4807 4916 . - . ID=g531.t1.exon4;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 4807 4916 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 4446 4584 . - . ID=g531.t1.exon5;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 4446 4584 . - 1 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 4201 4277 . - . ID=g531.t1.exon6;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 4201 4277 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 3870 4008 . - . ID=g531.t1.exon7;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 3870 4008 . - 1 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 3527 3709 . - . ID=g531.t1.exon8;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 3527 3709 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 3026 3158 . - . ID=g531.t1.exon9;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 3026 3158 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 2741 2822 . - . ID=g531.t1.exon10;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 2741 2822 . - 2 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 2364 2439 . - . ID=g531.t1.exon11;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 2364 2439 . - 1 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 1988 2167 . - . ID=g531.t1.exon12;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 1988 2167 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 1642 1721 . - . ID=g531.t1.exon13;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 1642 1721 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 1222 1405 . - . ID=g531.t1.exon14;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 1222 1405 . - 1 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . exon 513 976 . - . ID=g531.t1.exon15;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . CDS 737 976 . - 0 ID=cds.g531.t1;Parent=g531.t1 NODE_1774_length_9306_cov_43.9897 . three_prime_UTR 513 736 . - . ID=g531.t1.utr3p1;Parent=g531.t1 #PROT g531.t1 g531 MRAVIFIIAVAAALAAPSCAFYLPGVEPNNYAQDARIELKVNKLTSIKTQLPFDYYSLPFCKPDKIKDTWENLGEVLRGDRIKNSPYEISMKKDVACTVLCDGEYSSTQLHAFRRRIKEEYRINWLLDNLPAAMGITLKDGSQRYVQGFPVGHVDAHTDGVEDVYLFNHANIHIKYTEDAAAFEGYRIVSFEVRPESIGPELIKLGENGQCELPEGDRSPFLLPGKDNEKPARIVWTYSVVFKKSDTKWSERWDVYLSMNDNQIHWFSIVNSLVIVLFLSGIVALILIRTVRRDIARYNDEEFQDDASDETGWKLVHGDVFRPPNYSTPLTACVGTGIQILGMLIVTLMFALLGMLSPASRGSLLTMSLVLFVFMGIFGGYFSARLYKTCKGQNWKRQAMMTAMLFPSAVMSLAFFLNFFVWGKDSTFAVPFTTMVVLLLMWLGISLPLVFLGAYFGYRKAPYEQPVRTNQIPRQVPDQPWYMSSVISMLLAGVLPFGAVFIELFFIFSALWENKFYYLFGFLFLVFVILVITCSENTIVLIYFYLCNEDYHWWWRSFLMSGGCALYVYFYAIFYYCTKLSITDPIATMIYFGYTFLIALTFWFLTGAIGFYASFFFLRKIYGSVKID* # ORIGINAL: g532.t1 original gene structure, not modified by PASA NODE_1774_length_9306_cov_43.9897 AUGUSTUS gene 6480 7989 . - . ID=g532;Name=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS mRNA 6480 7989 . - . ID=g532.t1;Parent=g532;Name=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS exon 7717 7989 . - . ID=g532.t1.exon1;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS CDS 7717 7989 . - 0 ID=cds.g532.t1;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS exon 7078 7617 . - . ID=g532.t1.exon2;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS CDS 7078 7617 . - 0 ID=cds.g532.t1;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS exon 6721 6918 . - . ID=g532.t1.exon3;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS CDS 6721 6918 . - 0 ID=cds.g532.t1;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS exon 6480 6611 . - . ID=g532.t1.exon4;Parent=g532.t1 NODE_1774_length_9306_cov_43.9897 AUGUSTUS CDS 6480 6611 . - 0 ID=cds.g532.t1;Parent=g532.t1 #PROT g532.t1 g532 MASGDRLKPLHSPAGIGAIPGGLPGLSGLAPDASEAMAAKAQQLWQMLDDLAESNPEAYAKLIKRQIEEGKDHVKQRLEPPKPGFCVRTLSYDGMPVYINVSQCARVNKPKDDNEPLPVLGLPVRRGVEIAGKSSAIIDIVFHPSIIERCNTDVPFRLGLIDLAIDSAEDLSKDTPPPLRLVRNGADAGDPYVGDAAHLYSFFDKGKKGAKPASEVRRGDGDASEGHGSSLFAQLGSIAQSMDPPMASGGSGSPNAADKIAVLPSEIVETTKKSGPSKPLIQEVSADTVASSPTTLDPLPEYSVEWGDGHAIVRFALPLIDSVAEVELEMAGDSAIELTVPGKYASVLVDLGRQMDGDNYKAKFIKSKRSLVVTIPFEAA* # PASA_UPDATE: g10117.t1, single gene model update, valid-1, status:[pasa:asmbl_7519,status:12], valid-1 NODE_4679_length_1338_cov_44.0918 . gene 2 1338 . + . ID=g10117;Name=g10117.t1 NODE_4679_length_1338_cov_44.0918 . mRNA 2 1338 . + . ID=g10117.t1;Parent=g10117;Name=g10117.t1 NODE_4679_length_1338_cov_44.0918 . five_prime_UTR 2 3 . + . ID=g10117.t1.utr5p1;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . exon 2 101 . + . ID=g10117.t1.exon1;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . CDS 4 101 . + 0 ID=cds.g10117.t1;Parent=g10117.t1;5_prime_partial=true NODE_4679_length_1338_cov_44.0918 . exon 331 367 . + . ID=g10117.t1.exon2;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . CDS 331 367 . + 1 ID=cds.g10117.t1;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . exon 625 724 . + . ID=g10117.t1.exon3;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . CDS 625 724 . + 0 ID=cds.g10117.t1;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . exon 1037 1338 . + . ID=g10117.t1.exon4;Parent=g10117.t1 NODE_4679_length_1338_cov_44.0918 . CDS 1037 1338 . + 2 ID=cds.g10117.t1;Parent=g10117.t1;3_prime_partial=true #PROT g10117.t1 g10117 IVKVADFGLSRDTGASGDYYVAKNRRKLPVKWMSPESLERRIFTHASDVWSYGITMWEVYSRSAKPYAGLENHEVLGFINATNRLEKPEGCPQAIYAIMESCWRKHAETRPSFADIVTQLRKVIASYTRTTSVLESDVDVTQSAGKKASAKNTESTDNLLLSEQQGTYAETAPESHYVE # ORIGINAL: g9118.t1 original gene structure, not modified by PASA NODE_183_length_33049_cov_40.7446 AUGUSTUS gene 232 2963 . - . ID=g9118;Name=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS mRNA 232 2963 . - . ID=g9118.t1;Parent=g9118;Name=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 1251 2963 . - . ID=g9118.t1.exon1;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 1251 2963 . - 0 ID=cds.g9118.t1;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 975 1067 . - . ID=g9118.t1.exon2;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 975 1067 . - 0 ID=cds.g9118.t1;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 580 741 . - . ID=g9118.t1.exon3;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 580 741 . - 0 ID=cds.g9118.t1;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 232 327 . - . ID=g9118.t1.exon4;Parent=g9118.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 232 327 . - 0 ID=cds.g9118.t1;Parent=g9118.t1 #PROT g9118.t1 g9118 MDPHARVRGRGNAGSFPHPRTTPHIALFARGIRPAPASTVRAPNTLGTADAQNVQSNAPRNVWDTLTPRPAVVDARTAADSNAPPHTHSRIPRPSASPRAGAQQQQISRAPPGGSTAPALTPYERQIVARAARKWMERARLRLGMIKARTHADLALLRRTIRAWHDAMFVGKFAWRMKLRAKYHDRFRLYKKAFAGWMDFVAMRRRKRASVEAALAHRRTSLLKTHMSLWKQYCRQQESSRRMDLSAYTFRRRRLTSLAIAALRAHVIRQHSFDRVHDAFLLRIAFSEWRRRTQLGGAVLELRARAMKTRRDVRAAVVFASWASLAAKKSAYRANKTTADNLASAAAARHTIGVMRSVVARRRFARNRDSAVVRMCQIAIMRRAFTRLRVHVARSKMLRDAATRADALFLRQRVMRVWKIFLSNRQRRREKKAVALSADAHFRKALARHALRTWSRAHDAAEEARLAPLTRVALDFRRGRSMRDILRQWHIVAQYTRRRRALAAVGARHATMAAQRSHLRAWMGIVAARRSAREAFDAVSRGRRRAVTAGVFARWRAVIAARVDARMLERMAVIHCDESAMKRAFLRWRLLVDRARHNSQLEAASDALRRRALLRHTFRAWRVWTDGAKLNRIQFVAAVAHSDTVHLRVCWIAWQAFVSRKKRKREISATANAFARGKLLRSALDQWI # ORIGINAL: g9123.t1 original gene structure, not modified by PASA NODE_183_length_33049_cov_40.7446 AUGUSTUS gene 31772 32868 . + . ID=g9123;Name=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS mRNA 31772 32868 . + . ID=g9123.t1;Parent=g9123;Name=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 31772 31883 . + . ID=g9123.t1.exon1;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 31772 31883 . + 0 ID=cds.g9123.t1;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 32086 32151 . + . ID=g9123.t1.exon2;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 32086 32151 . + 2 ID=cds.g9123.t1;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 32359 32393 . + . ID=g9123.t1.exon3;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 32359 32393 . + 2 ID=cds.g9123.t1;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 32749 32868 . + . ID=g9123.t1.exon4;Parent=g9123.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 32749 32868 . + 0 ID=cds.g9123.t1;Parent=g9123.t1 #PROT g9123.t1 g9123 MPLRLQYCEYGPVAEKCKEWLKTNYDEAYEKLYGAAELAAKLGDATLEDDEEKKKRQTRGGKGMPRPNKKAGLLRGHDTDLNPTFDVASTLSPYHIIHRVRTAIQRPSGD* # ORIGINAL: g9122.t1 original gene structure, not modified by PASA NODE_183_length_33049_cov_40.7446 AUGUSTUS gene 26134 30687 . + . ID=g9122;Name=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS mRNA 26134 30687 . + . ID=g9122.t1;Parent=g9122;Name=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 26134 26343 . + . ID=g9122.t1.exon1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 26134 26343 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 26562 26667 . + . ID=g9122.t1.exon2;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 26562 26667 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 26909 27058 . + . ID=g9122.t1.exon3;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 26909 27058 . + 2 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 27265 28064 . + . ID=g9122.t1.exon4;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 27265 28064 . + 2 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 28324 29463 . + . ID=g9122.t1.exon5;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 28324 29463 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 29725 29931 . + . ID=g9122.t1.exon6;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 29725 29931 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 30066 30170 . + . ID=g9122.t1.exon7;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 30066 30170 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 30556 30687 . + . ID=g9122.t1.exon8;Parent=g9122.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 30556 30687 . + 0 ID=cds.g9122.t1;Parent=g9122.t1 #PROT g9122.t1 g9122 MADSFGLFSPPPAPGDVRRPSFLSPEGIPIVDRRGKEQDTYLPPTPHEDVSSKPASAERRIMRADTDALQELDDDLDEKGAGRTQKVLKRKLTFAKDSIDEQDSPSKHKSKRSRSDNAAPRALTERQQMALLLKMDQKNNNKSQTEDKIHSRNERGETPLHRAAIRGDYRAAESLIQRGADVNSRDYAGWTPLHEAANHGHSMLVALLLRNGADVDSRGLGGDTSLHDASINGHVGVAKVLVMFGANIALTNDGGKTPLDVAATEELATILMSPPSMDAREDHAMSFLGVDAPAQQAPRDESVLVHAEDVTRPVSHTHGMEERRKRTSTEVVENDASDERRRRKRRVLRTVAESSPQDRSAVAAQTTNTPSCMSPTATAEGATTIPGEGSQAVRSSAETECAMGLFAMMAAAETNDSESANKAIKNAHSDIVHKEVRTMRRVDSAGVEVLAEAASALLATAAASRVPHDLSEHTATTGAATCAVLKQAPSAVPRSDKRADKSTKGSMPPAEEKQSRDSGLREQKKRSLDGPNHRNDKENADSNAKNGSAPSSAVVRSKDSDAAKSFKIPKLPRAPFAPSATSLSAIILAQKEKAAAAAAARAPPVSVPKVTKDVVVLPQKAVKETPAPAKASQLEDNIQKGATRKPAGDTVVERDTTLAADLFPIYPPTTTRIDTLNVNPQNDYRADGCMQATTTTTVAAAEETVDVEGIIPLDAAEDKEPDVHVDVCTDADTAAVAEVCIAALSPPRRKRAPFAVKGPNPFTVDWEGETDLPSNYDSFTLATRSYSLDVLNEDDGAEAQIPVTPTREGSSKDKLRTSHALARDALSVLHRSQRERARLFAEQQIVRLFQSSGPEPKSACRSLLSKTPSSWKRHVDELKANRKGRRAGCDMTVALALLEETTWQFATHEALALYAAQRLEWTERTGECADDNVPLVAVSSAAVIMDDLF* # ORIGINAL: g9121.t1 original gene structure, not modified by PASA NODE_183_length_33049_cov_40.7446 AUGUSTUS gene 23446 25515 . + . ID=g9121;Name=g9121.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS mRNA 23446 25515 . + . ID=g9121.t1;Parent=g9121;Name=g9121.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS exon 23446 25515 . + . ID=g9121.t1.exon1;Parent=g9121.t1 NODE_183_length_33049_cov_40.7446 AUGUSTUS CDS 23446 25515 . + 0 ID=cds.g9121.t1;Parent=g9121.t1 #PROT g9121.t1 g9121 MIGHPQAGKTCIVENDDEVERRRHSKVKRYGQSSADADRSGHRVVRILSRGMSSGSVCSSRANTPDVEFDTRDKDKDALFLQPSYFNRVPEEIIVRILRLLGPGDLLRSAQVCRQWRRIAHDRSPWQRLVHTKWPLCSPDMYFGDWRRMFLDGNSLGGRADLTWRVEKFREITSKSLYSPSAIAGGFPWRLFLFPKGNNVEGMLSLYLDVANADTLPEGWRQDARFHLRVVNHRNPAASVRRDVPSHVFVASERDWGFTNFMSLDTINNDPEAWLENGALVIETSVETLPTALQGGEDRFDSMRVQFAVMTESNFTSHHGYELFDFADMPSQKMLWDDTLEPFKAIVQKRYGIPTSEQQFWTCCMRTNRTVRVFKRVTPAAERIPLLSLFTEVERKKLKVKLLFLRRVPAEANESGLCDYSCFEDLQPDEDEGHYGPLGGVARMLEGTEREQCLIFFKHFDPVEQKMSYVGQILADSNMPLLQLFPAMRRMAGMPADQPLIVFEEVKPGMIDLLDAKNTLEQSHLINGDIVCFQPAPDLPSIPSGAPTVDVYLAKLLEKVSVLFERSPSQKDSSPQPHSIRVTMNRSDTMFDAAQALATRLNLTLGSIRLEAMGREANPWVRPVRYSMGMTLSAVFGYSTGSSLPAHKLREGFWEHPTLTALVRFETVSPPPQPESYERIDMYSLFGEE* # PASA_UPDATE: g9120.t1, single gene model update, valid-1, status:[pasa:asmbl_2772,status:12],[pasa:asmbl_2773,status:12], valid-1 NODE_183_length_33049_cov_40.7446 . gene 9964 20382 . - . ID=g9120;Name=g9120.t1 NODE_183_length_33049_cov_40.7446 . mRNA 9964 20382 . - . ID=g9120.t1;Parent=g9120;Name=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 20355 20382 . - . ID=g9120.t1.exon1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 20355 20382 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 20006 20160 . - . ID=g9120.t1.exon2;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 20006 20160 . - 2 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 19706 19870 . - . ID=g9120.t1.exon3;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 19706 19870 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 19144 19561 . - . ID=g9120.t1.exon4;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 19144 19561 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 18725 18891 . - . ID=g9120.t1.exon5;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 18725 18891 . - 2 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 17994 18529 . - . ID=g9120.t1.exon6;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 17994 18529 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 17662 17806 . - . ID=g9120.t1.exon7;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 17662 17806 . - 1 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 17287 17455 . - . ID=g9120.t1.exon8;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 17287 17455 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 16970 17138 . - . ID=g9120.t1.exon9;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 16970 17138 . - 2 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 16391 16745 . - . ID=g9120.t1.exon10;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 16391 16745 . - 1 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 15851 16218 . - . ID=g9120.t1.exon11;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 15851 16218 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 15418 15634 . - . ID=g9120.t1.exon12;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 15418 15634 . - 1 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 14662 15168 . - . ID=g9120.t1.exon13;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 14662 15168 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 13420 14505 . - . ID=g9120.t1.exon14;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 13420 14505 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 12973 13155 . - . ID=g9120.t1.exon15;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 12973 13155 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 12527 12772 . - . ID=g9120.t1.exon16;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 12527 12772 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 12028 12408 . - . ID=g9120.t1.exon17;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 12028 12408 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . exon 9964 11766 . - . ID=g9120.t1.exon18;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . CDS 10648 11766 . - 0 ID=cds.g9120.t1;Parent=g9120.t1 NODE_183_length_33049_cov_40.7446 . three_prime_UTR 9964 10647 . - . ID=g9120.t1.utr3p1;Parent=g9120.t1 #PROT g9120.t1 g9120 MASISRDEKGVSFIAASPAEFVKNFGGRRTIEKVLIANNGIAAVKCIRSIRRWAYEVFGNERAIKFTVMATPEDIKANAEYIKMADQYVPVPGGTNNNNYANVDLIVDLAERLGVQAVWAGWGHASENPKLPDALAEINISFIGPPGNAMRALGDKISSSIVAQSANVSTLPWNGSGLSIECNIVEGGAANPEDMITVPDDVYAKGTVQNAQDGLRAASLIGFPVMIKAAEGGGGKGIRLVSTADEFSSLFRQVQGEVPGSPIFIMKLAKKARHLEVQILADEYGNAISLFGRDCSVQRRHQKIIEEAPATIAPADVFEEMEKAAVRLARLVGYVSAGTVEYLFNEEENNYYFLELNPRLQVEHPCTEMVADVNLPAAQLQVAMGIPLHRIRDIRALYGEDPLGTTHVNFSAPKQKPQPKGHVVACRITAENPDEGFKPSGGLMQELTFRSSKNVWGYFSVSASGGLHEFADSQFGHVFSWGENRENARRNMVVALKEISIRGDFRTTVEYLVKLLETSEFQHNRIDTAWLDGLIREKVTAERPDIMLAVVCGAIHIADLQIQERFQSYLRSLERGQVLSRDFLKNSAVVELIYGNSKYVVDTTRSGPNGFVLTMNSSVVEVDMHKLSDGGTLVMFGGQSHVTYMKEEVDRYRVTLDGKTCVFQKENDPTKLRTSSPGKLMRYLVGEGEHVSAGKPYAEIEVMKMIMPLVSSESGVLHQTKQQGSILETGDVVATLVLDDPSRVQRVDVYASPFPELKDAQLQGARPHQVFRTAMAALESVMSGYELPDMIRNDKLREYITQFVTTLQDPRLPMLELQEVLAALASRLPAPLLNRISMLLGQYGNSINSMFCTFPTQQIANAVDLFASSLVSEQDRTQFFMVVEPVITLIQRYRNGIRGHMKMVLTALIRQYLDVEKLFGGEKSYEEVIYSLRELHRDRLPRVVQIISSHARVHCKNQLVLVLLDYLCGKDGSLTSPEDKLTLGELAALSSNSTTKVSLRSRQILIQSHLPSFNRRRLDIEVFLQSAVDSIGEKCAEKLQSLVDSSSTIFDVLMTFFYHKNVAIQLAALEVYVRRAYVAYEMEGIRHDWLPGGKIVIEWQFLLPKSHPSLQNNARLRTSDVGMGSPRRASMKKVMSLGDNLCLLDTTDRSICRLGVMASFDSLDEFSRHFNDVMERFPRRMAPISEMEADESHSDDELWGEPIHCLNIALRTSAPMDDSDPDDKILDLLGAFVNSQRRTLHDRDIRRVTFVIQRPENFPKYFTFRERLDFKEDSIYRHIEPALAFLLEIFRMSNYRIQFVPTANHKLHLYYGEGKPVDGQPVTDRRFFARSIIRHADLISSNTSLEYFFSEGERMLIEALDEFEVALADPRFGPTDCNHIFMNFAPTVLVDPLVLRENLRSLIIRHGKRLWKLRVTQAEIRIQARLTATTPPIPIRFFVKNMTGFLLLINVYREIEDPVTGKTIFETFVNSGAPGPLHGHDVSAPYMVKDHLQLKRYSAQSQGTTYAYDFPELFREAVHLAWARHTGTAGDASPAVPETLMNVAELVIDEHESLVPVQRQPGCNTCGIVAWKMELFTPESPQGREIVVICNDITYVIGSFGPAEDVMFKKASEYARIRGIPRIYVSANSGARIGLADEVKKLFRVAWINDDQPQKGFKYIYVTPEDYKTLNATNSVKAEVVEESGETRYKINDIIGALDGLGVENLRGSGMIAGETSLAYEETFTITLVTCRSVGIGAYLVRLGQRVIQVEGTHIILTGANALNKVLGREVYTSNAQLGGTQIMYNNGVSHLAVGNDFEGVASIVHWLSYVPKVRDGPLPVIKPIDPIDREIDFVPTETPYDPRWMLAGRADPANPKKWQSGFFDRDSFSETLGGWAQTVVCGRGRLGGIPMAVIAVETRTVEVIIPADPANHDSEVQLLQQAGQVWYPNSAFKTAQAIRDFDREQLPLIVFANWRGFSGGMRDMYEEILKFGAYIVDALRTYRQPAFIYIPPHGELRGGAWVVVDPTINPAMMEMYADEQSRGGVLEPAGTVSIKFRKRDIVKTIGRIDALAMALATELARPDLDDATAKDLRKRLKQRQDDLLPVYTQVANTFADLHDTAGRMKAKGCVSDVLQWKSSRLFFYWRLRRRRKSAGR* # PASA_UPDATE: g9119.t1, single gene model update, valid-1, status:[pasa:asmbl_2774,status:12],[pasa:asmbl_2775,status:12],[pasa:asmbl_2776,status:12], valid-1 NODE_183_length_33049_cov_40.7446 . gene 3905 9532 . + . ID=g9119;Name=g9119.t1 NODE_183_length_33049_cov_40.7446 . mRNA 3905 9532 . + . ID=g9119.t1;Parent=g9119;Name=g9119.t1 NODE_183_length_33049_cov_40.7446 . exon 3905 4096 . + . ID=g9119.t1.exon1;Parent=g9119.t1 NODE_183_length_33049_cov_40.7446 . CDS 3905 4096 . + 0 ID=cds.g9119.t1;Parent=g9119.t1 NODE_183_length_33049_cov_40.7446 . exon 4193 8628 . + . ID=g9119.t1.exon2;Parent=g9119.t1 NODE_183_length_33049_cov_40.7446 . CDS 4193 8628 . + 0 ID=cds.g9119.t1;Parent=g9119.t1 NODE_183_length_33049_cov_40.7446 . exon 8890 9532 . + . ID=g9119.t1.exon3;Parent=g9119.t1 NODE_183_length_33049_cov_40.7446 . CDS 8890 9532 . + 1 ID=cds.g9119.t1;Parent=g9119.t1 #PROT g9119.t1 g9119 MKLYCDKNAVALMSASAHWIFRGLLLMACVIGMLATAPAVASEVDDVSLFTSQQRTVNPLFLDNAGTQLVKREDSNIVAFTLTVGNGTIYDVDVSAINTSLVSILRRLQEAAQNALALLQNPSQPPQIRTTAQVNASSVTSAIPIFLPSDAIPYSLDSGERVSIVIDGGGAAFACTKTPAIASSAFAVDSGELQFLRVNISGCKAAGTSSDADLVHVSESAIFTMADSFFSAMDNVRIVTSSGRVSVSGCSFSGLLMKRGDNGGGVANLKDASSTSVVSSTFSSITVSNFYNGGAFSLHDNALLEVATSSFLKVFAKAYGFGGVFYLGDDATASVSQCLFNGVSAGSDGGVAMTSGSASFTMAHCTVQSATSDFSGGIVSAFDQSSVYLSGLDVADAGSSSGGLCAAQDTAHVVIANSVVRSVAGDSGGGMFRLYGTSLIEARNLTVSNPQTYGSGAIAIAAEESHLSLSNCTVSGINALGNGGAFWTSDTGKVSVADTFLVGVRSDMNGALFHSESQSTFELTACTIASVEAAFDGGVFHMIEESSGTVHDCTFQDSFGDTAGLAYVGDDAQLHMTSTGVLRATSRSHGGAFALYNNARVDVDDLSLVTLSGDGDGALVVAHDTAEFAGSNVRAQGLRSGGFGGISLLTGGANGSFKNSTFTDVTAALDGGGFTLQGTSTLSLDGCKLSHVTTGGFGGVFSLSRESSATVVGSTFILTSADWGGGLCHAKDDAALSVETSTVSNASTGVSGGILLLWSRAVAKFVGCTLVASSAVWNGGLASTSGASTLEVRDCSVSGVSAGSDGGVLSMSSSSTATVSNTTVVASHSARDGGFADLRDDSRLAVEDSELRSMRAFGSGGSVLASARSKVTFTHSVIADSVARVHGGVAHVGGSSTIVIVDCTANGTASETGAGGVLYAEDNATVTVYMTAFFNTSSATDGGNVYAQGAATVKLQNITIEGTTAGTADSSSNSELDGVCIGTQASEGNGGAVHAREGATITASGLTVSSARASGSGGVAYAKGSAVVVTFTNVKASSTRATLGGFVSAIGGATVLINQSSVEGSNAVGDGGCLYASSGARLQLSYLRQVDCNAGTTPSTYGAGGAAYVGAGATLAVGESVVSVNVSGMIGPGVFTIDRMDDATISRMQIDGARAPDVSSLPRGWSVGGKVSGAAARLAPTFPHVVVNSGAPLPPFNLTIYDAYGNAISLPDSLNLAVTLELRGSTSGVVNACPDNGCALIGNVERNFASSSVASFDVLQVFARPGIYRIVVRSTNPLKYGDKDPSAARRSLVDDAFIAVTVSNCTAGENLERKALSSHSVEGSQLLWQCVQLPIVAAASASSDSAEKIAIPVAAVVGCIVVACLFVALRWRVITLREAKHRATHERFVQGNNEVLQTLKTLEIPRELLDVQDKIGVGEFGIVYRVRVTSQDGCPRICAAKSLKTAATYDERVSFVAEADIMKGLTHPNIVAMIGVVFDAEPFYVLLEYVPHGCLKSFLEGIPSAKRDAHATVLVLEHFALQMATGMAYLVQMNIIHRDLAASRKAEQDGIYTRISGKNGKLPIRWLAPECTDQGSLAYSERSDAWAFAITVLVEMFSFGGIPFPTMTNAEVVAHISSGGRPQRLPTCPVDLFAVVSECWNADPMDRPTFAEIVKKLQRLRKNAPQSAAATPMMSRAFSAYDNTHSLEQSFLNGDGMRSAEDLSRYALSSAMMARLRGQSSPAPLSSAGSLSGSQRVLYDNVPTIAAEIEVYESLV* # PASA_UPDATE: g11457.t1, single gene model update, valid-1, status:[pasa:asmbl_5901,status:12],[pasa:asmbl_5902,status:12], valid-1 NODE_3335_length_3706_cov_41.2165 . gene 1282 3564 . - . ID=g11457;Name=g11457.t1 NODE_3335_length_3706_cov_41.2165 . mRNA 1282 3564 . - . ID=g11457.t1;Parent=g11457;Name=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 3376 3564 . - . ID=g11457.t1.exon1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 3376 3564 . - 0 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 3010 3222 . - . ID=g11457.t1.exon2;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 3010 3222 . - 0 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 2704 2866 . - . ID=g11457.t1.exon3;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 2704 2866 . - 0 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 2220 2454 . - . ID=g11457.t1.exon4;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 2220 2454 . - 2 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 1871 1972 . - . ID=g11457.t1.exon5;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 1871 1972 . - 1 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . exon 1282 1637 . - . ID=g11457.t1.exon6;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . CDS 1508 1637 . - 1 ID=cds.g11457.t1;Parent=g11457.t1 NODE_3335_length_3706_cov_41.2165 . three_prime_UTR 1282 1507 . - . ID=g11457.t1.utr3p1;Parent=g11457.t1 #PROT g11457.t1 g11457 MQLAPSVEGGTGVVEMLFCTSLVAIVGAGEQPAFSPRRLQIANTKRQSTICELNFVNTVLAVKMNRKRLVVVLEDRIHVYDITNMKLLHTVETPPNQRGVCALSPNSENNFLAYPYSQTPGDKNTLIFDALNLQAVTLFQAHKTPLSSMAFNYTGTLLATSSEKGTVIRVFSVPDGAKLYQFRRGTYPATVYSMAFNQASTLLAVSSDTDTVHIFKLDQGAQPRRKSASGLAAYIPEMLSEMWEPQRDFAHLKLPSQGVLNICALSSTTPQVMIVTSDGYFYQYNINMQEGGECALLRQYSILDPSEGKSRVDSDAVDQSSPAQQGTSAGAVEEKKEPEAATS* # ORIGINAL: g11456.t1 original gene structure, not modified by PASA NODE_3335_length_3706_cov_41.2165 AUGUSTUS gene 119 718 . + . ID=g11456;Name=g11456.t1 NODE_3335_length_3706_cov_41.2165 AUGUSTUS mRNA 119 718 . + . ID=g11456.t1;Parent=g11456;Name=g11456.t1 NODE_3335_length_3706_cov_41.2165 AUGUSTUS exon 119 718 . + . ID=g11456.t1.exon1;Parent=g11456.t1 NODE_3335_length_3706_cov_41.2165 AUGUSTUS CDS 119 718 . + 0 ID=cds.g11456.t1;Parent=g11456.t1 #PROT g11456.t1 g11456 MASEEEANGAAVRTRVRRRGNIYFYEAEDHEETAPVESLIAPPALPSFAPPSVESSGVSGISPTPIPSPVASVCEFVRYRFMNSFEDYVMLYGGHEAGLFIDGEDSPIPFDRHSSDAFYFVKSDAGDMFALARGATPESGLSESQSAASLLTALRALYANQTRVFLVDKGDENLYYYPDKKVGEFFAWNRTAHTIQQVS* # PASA_UPDATE: g4224.t1, single gene model update, valid-1, status:[pasa:asmbl_5094,status:12], valid-1 NODE_2837_length_5008_cov_41.4481 . gene 2544 4946 . + . ID=g4224;Name=g4224.t1 NODE_2837_length_5008_cov_41.4481 . mRNA 2544 4946 . + . ID=g4224.t1;Parent=g4224;Name=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 2544 2686 . + . ID=g4224.t1.exon1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 2544 2686 . + 0 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 2924 3027 . + . ID=g4224.t1.exon2;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 2924 3027 . + 1 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 3231 3283 . + . ID=g4224.t1.exon3;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 3231 3283 . + 2 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 3665 3768 . + . ID=g4224.t1.exon4;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 3665 3768 . + 0 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 4163 4244 . + . ID=g4224.t1.exon5;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 4163 4244 . + 1 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 4432 4601 . + . ID=g4224.t1.exon6;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 4432 4601 . + 0 ID=cds.g4224.t1;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . exon 4874 4946 . + . ID=g4224.t1.exon7;Parent=g4224.t1 NODE_2837_length_5008_cov_41.4481 . CDS 4874 4946 . + 1 ID=cds.g4224.t1;Parent=g4224.t1 #PROT g4224.t1 g4224 MAATAADSGPLYCAQQINIPADLPDILKQYTKAAVKAQPLDIVDWSADYFVQLFNRRGPLSAPTSAASTKKAVDHTAPEAPAASSAPVVTVAMISDLRRELISMSARDFLIPRDSLEEACEKVSLPKQSVQDVLTVGADYFDTADGINWLHFYALIWGLKSNDFVQNLNSICQLGGDQDGYLTYAEFEIIYNFLSDIDVDQEISVEQAAEVLDYLKGVSDEQDGRIYVDNLKSDDCPPLTGV* # ORIGINAL: g4223.t1 original gene structure, not modified by PASA NODE_2837_length_5008_cov_41.4481 AUGUSTUS gene 199 1627 . - . ID=g4223;Name=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS mRNA 199 1627 . - . ID=g4223.t1;Parent=g4223;Name=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS exon 1494 1627 . - . ID=g4223.t1.exon1;Parent=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS CDS 1494 1627 . - 0 ID=cds.g4223.t1;Parent=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS exon 667 910 . - . ID=g4223.t1.exon2;Parent=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS CDS 667 910 . - 1 ID=cds.g4223.t1;Parent=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS exon 199 420 . - . ID=g4223.t1.exon3;Parent=g4223.t1 NODE_2837_length_5008_cov_41.4481 AUGUSTUS CDS 199 420 . - 0 ID=cds.g4223.t1;Parent=g4223.t1 #PROT g4223.t1 g4223 MSTAPHQGGGGKRRASGKDASAGGGHGGASGSNAGRGGGGAPRGGGPSSSGGPQQSRGHGGQPQSRQAAAPASSAAHEHTASSAVSNTNTNTNTNTNNSNNNSPIHDEMRARFIFFQANLMGLPVLVQVKSGAMYEGIFDGCGTDHNNYGVSLRYVKKITPAGNASAHAGGNAGNAAANPRPAAEDCPPYMIIYGRDIVQ # ORIGINAL: g2840.t1 original gene structure, not modified by PASA NODE_4947_length_1124_cov_68.5825_potentialcontaminant AUGUSTUS gene 2 691 . + . ID=g2840;Name=g2840.t1 NODE_4947_length_1124_cov_68.5825_potentialcontaminant AUGUSTUS mRNA 2 691 . + . ID=g2840.t1;Parent=g2840;Name=g2840.t1 NODE_4947_length_1124_cov_68.5825_potentialcontaminant AUGUSTUS exon 2 691 . + . ID=g2840.t1.exon1;Parent=g2840.t1 NODE_4947_length_1124_cov_68.5825_potentialcontaminant AUGUSTUS CDS 2 691 . + 0 ID=cds.g2840.t1;Parent=g2840.t1 #PROT g2840.t1 g2840 VAPAPTLMPLSSTAPHTSRAFTATNRDYVAQTLSTASYELKRSLATSTLPTFPYGETAKTVLATAAIVDSCFWARAGSNIDNPNVLRKCQFFEKIPVPGRNGLNADVSERKYVEFFALVEQTTESEGALFIKSLTAHTCEVLKKPPAAEAASEYKMYRRADWVVALGQLRHAFVHRGSFVLEEDLKRVAAATGREWNDGAVSERNDWFEAAIRTLCITALNHLNKMSGF* # ORIGINAL: g10087.t1 original gene structure, not modified by PASA NODE_782_length_17740_cov_44.0771 AUGUSTUS gene 1655 2636 . - . ID=g10087;Name=g10087.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS mRNA 1655 2636 . - . ID=g10087.t1;Parent=g10087;Name=g10087.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS exon 1937 2636 . - . ID=g10087.t1.exon1;Parent=g10087.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS CDS 1937 2636 . - 0 ID=cds.g10087.t1;Parent=g10087.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS exon 1655 1746 . - . ID=g10087.t1.exon2;Parent=g10087.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS CDS 1655 1746 . - 2 ID=cds.g10087.t1;Parent=g10087.t1 #PROT g10087.t1 g10087 MAPLKTLNTHRATEPCTMLAEPHGRHHLRWHILPTGGLSEFATTSSAATTAPTTTSTACTAAATSIAAAPLSPSSFRLDHDGVILTWTPALTDTTGFTAEQVVGRSFDCLYTGDEVEQGLPARSLQHARAHGEYDEVAERTRSDGSLYYTSVTIRALHMGFVYTARDITGQMSALADERAGESRRIQSAVERRDAARTSFLARMLREAIAAVERVHGAGAEAVCTGTTATTPSVEAPVVHVMDVLQDTLDVILALSADDKRKS* # PASA_UPDATE: g10086.t1, single gene model update, valid-1, status:[pasa:asmbl_9355,status:12], valid-1 NODE_782_length_17740_cov_44.0771 . gene 135 877 . - . ID=g10086;Name=g10086.t1 NODE_782_length_17740_cov_44.0771 . mRNA 135 877 . - . ID=g10086.t1;Parent=g10086;Name=g10086.t1 NODE_782_length_17740_cov_44.0771 . five_prime_UTR 782 877 . - . ID=g10086.t1.utr5p1;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . exon 637 877 . - . ID=g10086.t1.exon1;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . CDS 637 781 . - 0 ID=cds.g10086.t1;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . exon 383 470 . - . ID=g10086.t1.exon2;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . CDS 383 470 . - 2 ID=cds.g10086.t1;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . exon 135 201 . - . ID=g10086.t1.exon3;Parent=g10086.t1 NODE_782_length_17740_cov_44.0771 . CDS 135 201 . - 1 ID=cds.g10086.t1;Parent=g10086.t1;3_prime_partial=true #PROT g10086.t1 g10086 MGDDYLDIFGEGLGVFGQPRIFHGERGADFEYENGAIRLKLKLPRDSNSDLFAHFVWISAITMADWITTGKIDVVNKRVLELGAGAALPGICSAANGARA # PASA_UPDATE: g10089.t1, single gene model update, valid-1, status:[pasa:asmbl_9354,status:12],[pasa:asmbl_9356,status:12], valid-1 NODE_782_length_17740_cov_44.0771 . gene 7944 16193 . - . ID=g10089;Name=g10089.t1 NODE_782_length_17740_cov_44.0771 . mRNA 7944 16193 . - . ID=g10089.t1;Parent=g10089;Name=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 14928 16193 . - . ID=g10089.t1.exon1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 14928 16193 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 13949 14672 . - . ID=g10089.t1.exon2;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 13949 14672 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 13237 13366 . - . ID=g10089.t1.exon3;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 13237 13366 . - 2 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 12539 12620 . - . ID=g10089.t1.exon4;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 12539 12620 . - 1 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 12020 12191 . - . ID=g10089.t1.exon5;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 12020 12191 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 11584 11764 . - . ID=g10089.t1.exon6;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 11584 11764 . - 2 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 11309 11345 . - . ID=g10089.t1.exon7;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 11309 11345 . - 1 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 10868 10927 . - . ID=g10089.t1.exon8;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 10868 10927 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 10361 10400 . - . ID=g10089.t1.exon9;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 10361 10400 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 9677 9768 . - . ID=g10089.t1.exon10;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 9677 9768 . - 2 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . exon 7944 9335 . - . ID=g10089.t1.exon11;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . CDS 8400 9335 . - 0 ID=cds.g10089.t1;Parent=g10089.t1 NODE_782_length_17740_cov_44.0771 . three_prime_UTR 7944 8399 . - . ID=g10089.t1.utr3p1;Parent=g10089.t1 #PROT g10089.t1 g10089 MLCDGAKGTCSCPPGWMGANCDKPCQSGLGGPTCNITCAAGTWGPNCTFTCRCMNGNCDVAGGCICRPGWTGTDCDKPCSTSTGDPYCVKPCASGCLSSNTVGGCDPISGCNCSAGWTGPDCSARCRAGYGAPACNCAGDPVVTTLCAHCDVGWQGRACTVPCNGSSYGVDCETKCNCSGGMCDRFNGRCVTCPPGKSLASGCADACPTGTYGRNCASKCTCKAGITCDPVVGCVCPPGWTGANCDNRCPNGTYGFLCANACPCSNNASCDSITGECMCATVAGWTGVMCNEKCPYNTYGQNCTQKCACMNGAMCSRTSGCVCTAGWMGVNCSTSCALSPIPLRYGANCVLPCQCKNGDCDPKTGVCTCKSAWVGATCANLLVPPKPNATIVRRLTEIVLQVNGEWLYEIKRIGCPTVDNIRVLGGAFVDTRLITNQQYAYTITAINNGINTNTSSSGDQREARSEALEMFAVRTDPPDPPRDVTALPIMPSKEVHMPYIKIMWVDDDSSGPIVNTTVVRSGDGQTNTTITVAMRTYADYDVLPGVAYSYAIASRNKYGVSNYTNSTIVIIPGNREKPPTDASGQASAQGTNTGVVVGGVLASVVCGAGGVIAAFLLWRRRHKRKREAVIRSELELIDAVVRRPEIAELEIPGSYIKIRNKIGEGEFGEVYLGEIDAGNGSAKRIVAVKAFKLAAMATTDEMRSARSAFMGEIDLMRTVPKHTNLISLIGVCTQSEPNCMCIEYAQFGDLRKYVSANVHAITTVDMMAFVIDIACGMEQLAACQIIHRDLAARNCMVFAGPRMGAQIDTTFNGLLSTIGHVTVKIADFGLSRESNRDYYTAKSRRKLPIKWMAPESLERQLFTHASDCWSFGVTMWEVFSKAGKPYPGVENHAIFDHLQNNRLLQPQDCPDNVYAVMESCWRRHPETRPAFSQLVPTLRKVALALCRNTTNGSSSTPINAAVAQKSRKKAIAIESESTDSLLGRGSASGESSAVVDAADAQKSRKKAFAIESESTDNGYGYGNGYGYGYEGDGVGVGRTSSVIMHTQLHSSSSSPPSGRPSSGSGSGSGSGSAADKLTSAPITRQGFAMAHFNAAGGTESADNTDGARSNSDPGKGKGGAGGKSGGAKETHPGGISDVDSDRYAEVASDAAVGTEKANRAELKHTPTQGSAVNASTPSSVGASDGNDSAMAASAAVPRSQTTQIIPTDTRTLDGVDGGGDAVFVCDSEYAETPPADECS* # ORIGINAL: g10088.t1 original gene structure, not modified by PASA NODE_782_length_17740_cov_44.0771 AUGUSTUS gene 5524 6336 . - . ID=g10088;Name=g10088.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS mRNA 5524 6336 . - . ID=g10088.t1;Parent=g10088;Name=g10088.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS exon 5524 6336 . - . ID=g10088.t1.exon1;Parent=g10088.t1 NODE_782_length_17740_cov_44.0771 AUGUSTUS CDS 5524 6336 . - 0 ID=cds.g10088.t1;Parent=g10088.t1 #PROT g10088.t1 g10088 MAPLAAKTPNTHHATEPCTTLAEPHGRHHLRWHILPTGSFSEFATTSSAATTAPTTTSTACTAAATSIAAAPLSPSSFRLDHDGVILTWTPALTDTTGFTAEQVVGRSFDCLYTGDEVEQGLPARSLQHARAHGEYDEVAERTRSDGSLYYTSVTIRALHMGFVYTARDITGQMSALADERAGESRRIQSAVERRDAARTSFLARMLREAIAAVERVHGAGAEAVCTGTTATTPSGVSAAVEAPVVHVMDVLQDTLDVMLALSADDKRKS* # ORIGINAL: g13099.t1 original gene structure, not modified by PASA NODE_3797_length_2728_cov_45.8952 AUGUSTUS gene 1274 2065 . + . ID=g13099;Name=g13099.t1 NODE_3797_length_2728_cov_45.8952 AUGUSTUS mRNA 1274 2065 . + . ID=g13099.t1;Parent=g13099;Name=g13099.t1 NODE_3797_length_2728_cov_45.8952 AUGUSTUS exon 1274 2065 . + . ID=g13099.t1.exon1;Parent=g13099.t1 NODE_3797_length_2728_cov_45.8952 AUGUSTUS CDS 1274 2065 . + 0 ID=cds.g13099.t1;Parent=g13099.t1 #PROT g13099.t1 g13099 MSVKWIMLLGDSNSRNLYDQFFADISGQGVSPSGHANPQLTIHEVGAPYKGVPDCEGLHSDRDRYVMLGDAIVLKISLRFIQRTSRLRAMLTGNWTAEQWNALTYWKGVAYQDGSDLEPYDKTPPELETFTRGKYPDAIVVNYGLWLTVNGLQAFEESFSQFNTNLRHIPTRLAMTSGGIQQHALFTDANVLEQDEFVLSAGERFGFPVINFREIISSVPVAESMADGIHFVSFVYQTLVTLIIGQLCTWKTVLQCRDDVKSH* # PASA_UPDATE: g7081.t1, single gene model update, valid-1, status:[pasa:asmbl_6945,status:12], valid-1 # PASA_UPDATE: g7081.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6944,status:12], valid-1 NODE_4099_length_2186_cov_39.5424 . gene 222 1012 . - . ID=g7081;Name=g7081.t1 NODE_4099_length_2186_cov_39.5424 . mRNA 222 1012 . - . ID=g7081.t1;Parent=g7081;Name=g7081.t1 NODE_4099_length_2186_cov_39.5424 . five_prime_UTR 919 1012 . - . ID=g7081.t1.utr5p1;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . five_prime_UTR 711 796 . - . ID=g7081.t1.utr5p2;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . exon 919 1012 . - . ID=g7081.t1.exon1;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . exon 599 796 . - . ID=g7081.t1.exon2;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . CDS 599 710 . - 0 ID=cds.g7081.t1;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . exon 222 307 . - . ID=g7081.t1.exon3;Parent=g7081.t1 NODE_4099_length_2186_cov_39.5424 . CDS 222 307 . - 2 ID=cds.g7081.t1;Parent=g7081.t1;3_prime_partial=true NODE_4099_length_2186_cov_39.5424 . mRNA 222 878 . - . ID=g7081.t1.1.5b6be70b;Parent=g7081;Name=g7081.t1 NODE_4099_length_2186_cov_39.5424 . five_prime_UTR 822 878 . - . ID=g7081.t1.1.5b6be70b.utr5p1;Parent=g7081.t1.1.5b6be70b NODE_4099_length_2186_cov_39.5424 . exon 599 878 . - . ID=g7081.t1.1.5b6be70b.exon1;Parent=g7081.t1.1.5b6be70b NODE_4099_length_2186_cov_39.5424 . CDS 599 821 . - 0 ID=cds.g7081.t1.1.5b6be70b;Parent=g7081.t1.1.5b6be70b NODE_4099_length_2186_cov_39.5424 . exon 222 307 . - . ID=g7081.t1.1.5b6be70b.exon2;Parent=g7081.t1.1.5b6be70b NODE_4099_length_2186_cov_39.5424 . CDS 222 307 . - 2 ID=cds.g7081.t1.1.5b6be70b;Parent=g7081.t1.1.5b6be70b;3_prime_partial=true #PROT g7081.t1 g7081 MNVDDKRIYNLIGDKKPTYEALGLVDTTEKEGLLQKQGAKPGALKPWTKRWCSLKGSFLYYFPAQP #PROT g7081.t1.1.5b6be70b g7081 MLHLHLCVGVVSIPLCPTALFFVCSSSRILRPLDILKMNVDDKRIYNLIGDKKPTYEALGLVDTTEKEGLLQKQGAKPGALKPWTKRWCSLKGSFLYYFPAQP # ORIGINAL: g2081.t1 original gene structure, not modified by PASA NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS gene 8028 8363 . - . ID=g2081;Name=g2081.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS mRNA 8028 8363 . - . ID=g2081.t1;Parent=g2081;Name=g2081.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 8028 8363 . - . ID=g2081.t1.exon1;Parent=g2081.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 8028 8363 . - 0 ID=cds.g2081.t1;Parent=g2081.t1 #PROT g2081.t1 g2081 MEPPKDCPTLANTAMEACWRKHAETRLQFSQLVLQLRRGMAVLCGTEGGGGGGGGGGNATDVAALGQSETYALMLPEGAYAESVAGEDESLHTLQNPIFQKDSFSTRHSSA* # ORIGINAL: g2080.t1 original gene structure, not modified by PASA NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS gene 255 7969 . - . ID=g2080;Name=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS mRNA 255 7969 . - . ID=g2080.t1;Parent=g2080;Name=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 7810 7969 . - . ID=g2080.t1.exon1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 7810 7969 . - 0 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 6974 7047 . - . ID=g2080.t1.exon2;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 6974 7047 . - 2 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 6541 6707 . - . ID=g2080.t1.exon3;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 6541 6707 . - 0 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 6312 6389 . - . ID=g2080.t1.exon4;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 6312 6389 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 5962 6033 . - . ID=g2080.t1.exon5;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 5962 6033 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 5645 5716 . - . ID=g2080.t1.exon6;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 5645 5716 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 5491 5562 . - . ID=g2080.t1.exon7;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 5491 5562 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 5176 5247 . - . ID=g2080.t1.exon8;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 5176 5247 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 4873 4944 . - . ID=g2080.t1.exon9;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 4873 4944 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 4567 4633 . - . ID=g2080.t1.exon10;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 4567 4633 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 3883 4009 . - . ID=g2080.t1.exon11;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 3883 4009 . - 0 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 3105 3505 . - . ID=g2080.t1.exon12;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 3105 3505 . - 2 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 2308 2992 . - . ID=g2080.t1.exon13;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 2308 2992 . - 0 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 1972 2183 . - . ID=g2080.t1.exon14;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 1972 2183 . - 2 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 1707 1821 . - . ID=g2080.t1.exon15;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 1707 1821 . - 0 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 1530 1578 . - . ID=g2080.t1.exon16;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 1530 1578 . - 2 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 967 1155 . - . ID=g2080.t1.exon17;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 967 1155 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 745 878 . - . ID=g2080.t1.exon18;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 745 878 . - 1 ID=cds.g2080.t1;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS exon 255 610 . - . ID=g2080.t1.exon19;Parent=g2080.t1 NODE_1522_length_10750_cov_23.1426_potentialcontaminant AUGUSTUS CDS 255 610 . - 2 ID=cds.g2080.t1;Parent=g2080.t1 #PROT g2080.t1 g2080 MELQCAYPPRATELQCTYPPRATELQCTYSPRATELQCAYSPLATQLYCDLRQGGWMQSLACLQSVMENKVGRLGGVLGDHSYVAVGFLNRLSALLVVCLLCQVEGVIGACPDTCTCNGGAVLSCAFPTGTTSLDWSDKQLTSIASGLFDGPSITGLKTLSLYGNQIATLPSGIFDKLDALTKLFLNNNHIATLPSGIFDKLTALTMLQLQSNQIATLPSGIFDKLTALTYIDIGSNKISTLPSGIFDYLPALHDLDLESNKIATFPIGIFDKLTALIRLDLQSNQIATLPSGIFDKLPNLPCLAGLYGPNCTHTCECGNDSCNRFNGTCTCSPGTGFYGSSCSACACTPGVCDDGLLGTGACNCTALLAIGGPNCNTSCDRLPGEPMYGYGCISRCACENGATCNRSTGECTCAFGWTGVVCSLIVPPSVPKVNATAELRPYGVGIRLKWYHDDTGPRAWNSWRYEISRTGLPKVYQVGDVLTFLDTDVVINQGYTYFVKAYNSRNVTSEMAGIATIESLRKTERPLPPLNVSSTPTLNPDNLQPMIKFTWNEDTSSGPIIKTLIFRDGRLLLEVAMVTEYKDRDVVFGQSYVYEIISENQYGKSTGTRFSETVTIGPSGSVTPTGGTSSSGNAAGRIAGGVVGAIVGAAGIVVAILFVRKRTSHKKMEALERSELDLIDTVVRRPKIAENEIPGSCIHLCNRIGEGEFGEVYLADIAPRGGSVAVIKAAVKTFKMTSLSADEIRCARSAFLAEIDLMLTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKNGDFSSIDLLCFCIDIARGMEHLAKCEIIHRDLAARNCMVVAGPRASNTIENGWKLSPKAQVTVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLERGIFTNATDVWSFGIVMWEVFARGVKPYPGLENHAVSIYLSQNRRMEPPKDCPKLVYAAMEACWRKRAETRPQFSQLVLQLRRGMVVLCGTEGGGSNLGGANATDSVAASDTYALTVPEDAYAETVTDAGEDESLHTLQNPIFHKDSLSTGHSHA* # PASA_UPDATE: g14449.t1, single gene model update, valid-1, status:[pasa:asmbl_7212,status:12],[pasa:asmbl_7213,status:12], valid-1 NODE_4302_length_1850_cov_40.0654 . gene 250 1670 . + . ID=g14449;Name=g14449.t1 NODE_4302_length_1850_cov_40.0654 . mRNA 250 1670 . + . ID=g14449.t1;Parent=g14449;Name=g14449.t1 NODE_4302_length_1850_cov_40.0654 . five_prime_UTR 250 250 . + . ID=g14449.t1.utr5p1;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . exon 250 346 . + . ID=g14449.t1.exon1;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . CDS 251 346 . + 0 ID=cds.g14449.t1;Parent=g14449.t1;5_prime_partial=true NODE_4302_length_1850_cov_40.0654 . exon 785 987 . + . ID=g14449.t1.exon2;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . CDS 785 987 . + 0 ID=cds.g14449.t1;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . exon 1311 1670 . + . ID=g14449.t1.exon3;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . CDS 1311 1386 . + 1 ID=cds.g14449.t1;Parent=g14449.t1 NODE_4302_length_1850_cov_40.0654 . three_prime_UTR 1387 1670 . + . ID=g14449.t1.utr3p1;Parent=g14449.t1 #PROT g14449.t1 g14449 GFGPAFSEKKDYKPNVVIEYVDESGRVMNPKEAFRHLSHRFHGKGSGKAKTEKRMKKIEEERAAMRGVGSLELTGGSFAALQEKQKEQGMAYVELKGFSTDSKQVGPLLKRPKIGKEDTLGSLY* # ORIGINAL: g2732.t1 original gene structure, not modified by PASA NODE_6595_length_538_cov_200.998_potentialcontaminant AUGUSTUS gene 113 397 . - . ID=g2732;Name=g2732.t1 NODE_6595_length_538_cov_200.998_potentialcontaminant AUGUSTUS mRNA 113 397 . - . ID=g2732.t1;Parent=g2732;Name=g2732.t1 NODE_6595_length_538_cov_200.998_potentialcontaminant AUGUSTUS exon 113 397 . - . ID=g2732.t1.exon1;Parent=g2732.t1 NODE_6595_length_538_cov_200.998_potentialcontaminant AUGUSTUS CDS 113 397 . - 0 ID=cds.g2732.t1;Parent=g2732.t1 #PROT g2732.t1 g2732 MGMGHCKVLRGITESERVGLLLELEECPYNNNLTVAEFFVLSHDLAVKNLGKDLLKTLLSEKDPAVVCDHLRDAFSRLRKGSTIAYYLKDIDAYD # PASA_UPDATE: g10630.t1, single gene model update, valid-1, status:[pasa:asmbl_9537,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 27247 29009 . + . ID=g10630;Name=g10630.t1 NODE_81_length_43628_cov_42.4499 . mRNA 27247 29009 . + . ID=g10630.t1;Parent=g10630;Name=g10630.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 27247 27332 . + . ID=g10630.t1.utr5p1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . exon 27247 27410 . + . ID=g10630.t1.exon1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . CDS 27333 27410 . + 0 ID=cds.g10630.t1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . exon 27918 28349 . + . ID=g10630.t1.exon2;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . CDS 27918 28349 . + 0 ID=cds.g10630.t1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . exon 28458 28571 . + . ID=g10630.t1.exon3;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . CDS 28458 28571 . + 0 ID=cds.g10630.t1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . exon 28735 29009 . + . ID=g10630.t1.exon4;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . CDS 28735 28923 . + 0 ID=cds.g10630.t1;Parent=g10630.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 28924 29009 . + . ID=g10630.t1.utr3p1;Parent=g10630.t1 #PROT g10630.t1 g10630 METLPVELAEDILGRLDAQSVVNAACTCKWMHRVATNRAVWQKVLRSACHPFPIDSVYFHGGMRASVAIQSSLEVVRKWATYAWMVRLEVPAKWKAIDEALVKIKRDVTGTEQPSGMRPGLAWKDIVSRSPKNVPFELAVSTMIHNGTDNSTDYYGVVHPYFHLQPVEEWEIYPTGAMDDVLSIDSVDDLEVDQTMINDYKKTGNVPFMIIGLGAADYWETVLVNTCTGSLFFVIHNIPEYNPLGSMLDWLKQAEVELQHPPPDVRESLS* # PASA_UPDATE: g10633.t1, single gene model update, valid-1, status:[pasa:asmbl_9542,status:12], valid-1 NODE_81_length_43628_cov_42.4499 . gene 35730 37689 . - . ID=g10633;Name=g10633.t1 NODE_81_length_43628_cov_42.4499 . mRNA 35730 37689 . - . ID=g10633.t1;Parent=g10633;Name=g10633.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 37633 37689 . - . ID=g10633.t1.utr5p1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . exon 37630 37689 . - . ID=g10633.t1.exon1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . CDS 37630 37632 . - 0 ID=cds.g10633.t1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . exon 37187 37273 . - . ID=g10633.t1.exon2;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . CDS 37187 37273 . - 0 ID=cds.g10633.t1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . exon 36890 37021 . - . ID=g10633.t1.exon3;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . CDS 36890 37021 . - 0 ID=cds.g10633.t1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . exon 36375 36631 . - . ID=g10633.t1.exon4;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . CDS 36375 36631 . - 0 ID=cds.g10633.t1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . exon 35730 36124 . - . ID=g10633.t1.exon5;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . CDS 36049 36124 . - 1 ID=cds.g10633.t1;Parent=g10633.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 35730 36048 . - . ID=g10633.t1.utr3p1;Parent=g10633.t1 #PROT g10633.t1 g10633 MGIDLIHKNDRKKVRREPKTEDVYIRLLVKLYRFLARRTDSKFNKIVLKRLFMSRVNRPPVSVAKLTRRMKGKEGKTAVVVGTVTDDIRLHEVPKLSVVALRFTDGARARILKAGGEVLTFDQLALRDPKGSKTVLLRGPKDREAIKHFGAAGVPDSTTKPFVRSKGRKFERARGRRASRGYKI* # ORIGINAL: g10631.t1 original gene structure, not modified by PASA NODE_81_length_43628_cov_42.4499 AUGUSTUS gene 31250 31945 . + . ID=g10631;Name=g10631.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS mRNA 31250 31945 . + . ID=g10631.t1;Parent=g10631;Name=g10631.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 31250 31424 . + . ID=g10631.t1.exon1;Parent=g10631.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 31250 31424 . + 0 ID=cds.g10631.t1;Parent=g10631.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 31644 31945 . + . ID=g10631.t1.exon2;Parent=g10631.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 31644 31945 . + 2 ID=cds.g10631.t1;Parent=g10631.t1 #PROT g10631.t1 g10631 MLTLRALGMPVRACIVASMATAVVSNHRYSTSMDPPIANNEEHPRGFSLAREGKRATHEWNETLASRSEAIVKAERMPYKDIAELQRETAEQRNQQEVRSLHRKERHAAQVHDKRDTHDGKHQHGKDMPHTTEVTGGDSFQMLEKSSTTTIVRRVVVP* # ORIGINAL: g10629.t1 original gene structure, not modified by PASA NODE_81_length_43628_cov_42.4499 AUGUSTUS gene 24834 25561 . + . ID=g10629;Name=g10629.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS mRNA 24834 25561 . + . ID=g10629.t1;Parent=g10629;Name=g10629.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 24834 24910 . + . ID=g10629.t1.exon1;Parent=g10629.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 24834 24910 . + 0 ID=cds.g10629.t1;Parent=g10629.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 25204 25561 . + . ID=g10629.t1.exon2;Parent=g10629.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 25204 25561 . + 1 ID=cds.g10629.t1;Parent=g10629.t1 #PROT g10629.t1 g10629 MDVKKGYKTRFEEHYNTSLRADVGFKKASVSTEFNGEQNVCRLNRAESGPCSVGGGVHDGKRVWVKSRGSKQGGAAEVVVMTMEGEMQYRTVICLRDDGTTASVDMYRGVFKVSADSIVHNGSTWYGSGYTCLESERDYSKLEI* # ORIGINAL: g10623.t1 original gene structure, not modified by PASA NODE_81_length_43628_cov_42.4499 AUGUSTUS gene 1553 4838 . - . ID=g10623;Name=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS mRNA 1553 4838 . - . ID=g10623.t1;Parent=g10623;Name=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 4562 4838 . - . ID=g10623.t1.exon1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 4562 4838 . - 0 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 4246 4404 . - . ID=g10623.t1.exon2;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 4246 4404 . - 2 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 3985 4050 . - . ID=g10623.t1.exon3;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 3985 4050 . - 2 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 3703 3821 . - . ID=g10623.t1.exon4;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 3703 3821 . - 2 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 3402 3515 . - . ID=g10623.t1.exon5;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 3402 3515 . - 0 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 1915 3189 . - . ID=g10623.t1.exon6;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 1915 3189 . - 0 ID=cds.g10623.t1;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 1553 1744 . - . ID=g10623.t1.exon7;Parent=g10623.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 1553 1744 . - 0 ID=cds.g10623.t1;Parent=g10623.t1 #PROT g10623.t1 g10623 MSIPNKYSLPDDERPEEIVRRRLMTSSQKSAASGTVGRFAASILSSGKAGRSGGDDMTKDVGDLLDAKAVTSLCDAIGRLGQLAALSVDIFSDINEQVERIASRSRVVSVRLQNVSDRLLPEFVLNYETATSFLKHPQRTDDPDLQFLMERDVCASDAVSHHHWPVSGHLRPTYRSRALVKAFEGAPPPPALQRLDRFRHDGRSSMKFYSHPEFFAEEWLEKKTQEAAARKERMRGKAKERADAKRHAQARLSTQQKPVAVPDVLVKHYDSDGNLLGVAPRGPGNPGMLSLRSANQQQTRPSASAAFEQYHMPSVDPHGGTSTASARRPTVSFNTNTNANANGNANPWMAATTSPITPSHVTAAPVRPGSARVKPSGDSENAPPPPHVRSAEKFHFSEFELPPPPEMYYEGYGESESLHRQTTSTPPPPPPPMFMDAEAAVYGGSVHASHWEEVQGDVCTSRGGPSDSPPPPPPPPPPPPPMYGTDADNDTERYGNASHEVNGAMEGCYYNGDDGRGSFEAYSPPPPPPPPPPPPQPESNSPTPMREDEYSHSPMTTSPPPPPPPMDVYERDVESPHTERARDAVYEAPAQWQSIPPPNVQTAPRLPPPPPPPPPPTLPTGDAEDPPRLSGERPLINPLALTATKLKAPTVQVQKEPDVRLDLLSQIRAGKRLRANPTEVEAPHAATEKAVTSSSGRSDVASVLMRRIAIAQDDDSDDAEDDDNDDDNDDEWD* # ORIGINAL: g10632.t1 original gene structure, not modified by PASA NODE_81_length_43628_cov_42.4499 AUGUSTUS gene 33487 35447 . + . ID=g10632;Name=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS mRNA 33487 35447 . + . ID=g10632.t1;Parent=g10632;Name=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 33487 34644 . + . ID=g10632.t1.exon1;Parent=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 33487 34644 . + 0 ID=cds.g10632.t1;Parent=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 34773 34919 . + . ID=g10632.t1.exon2;Parent=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 34773 34919 . + 0 ID=cds.g10632.t1;Parent=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS exon 35058 35447 . + . ID=g10632.t1.exon3;Parent=g10632.t1 NODE_81_length_43628_cov_42.4499 AUGUSTUS CDS 35058 35447 . + 0 ID=cds.g10632.t1;Parent=g10632.t1 #PROT g10632.t1 g10632 MTTRAIDCAKKAFASTNKDALRVAMQTVVGSILASLFVLVTVLRETFNNSNSVWVVITALVVIESNLGGSVTKSIQRAFGTALGCLFGYIVLVALIKCDPDTCLSCAYKPYVLCICLAVWGFALQYAKQVNPLHQYGCSLAILSASMVTLGTYLYSSANAETSSYALKYALYRIATIAVGAVIGTLVCIFVFPVTAVDQFRRTLILTWKDLGGVIIQVSDCLDSTWENGTEFDADGTITGSNDSPWSRRIIPQLRSVGRRLDGEIPLMRAAQGPERYFTLAISSLRRFVRRMHSADKVPSSSASIVPSDGSRDEQHNRGHLPGVVTVSASHASVRIEVEGRELDGLHRRHRGRQLDTKCLDSILRLSRRAYLLTVGMFSPAAYHRMASKLFADFEGGILAIALKQGIAGSLATFADILDGAYDDADAIIKKMNANIDSVEEIACRAVHAHTRLLLEAAQAELDKQLEVASFHRASTACSETADLTECCRLDGAVATSTQSQLGLDSQIDCGVDGAASRVPVKAGHVRYTTDDVEYFGLLVLTIRQYVRTLKELSCILSDVCHKQ* # PASA_UPDATE: g10628.t1, single gene model update, valid-1, status:[pasa:asmbl_9536,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 22177 24681 . + . ID=g10628;Name=g10628.t1 NODE_81_length_43628_cov_42.4499 . mRNA 22177 24681 . + . ID=g10628.t1;Parent=g10628;Name=g10628.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 22177 22423 . + . ID=g10628.t1.utr5p1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 22553 22613 . + . ID=g10628.t1.utr5p2;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 22177 22423 . + . ID=g10628.t1.exon1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 22553 22616 . + . ID=g10628.t1.exon2;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 22614 22616 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 22713 22832 . + . ID=g10628.t1.exon3;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 22713 22832 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 23051 23129 . + . ID=g10628.t1.exon4;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 23051 23129 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 23389 23417 . + . ID=g10628.t1.exon5;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 23389 23417 . + 2 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 23558 23710 . + . ID=g10628.t1.exon6;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 23558 23710 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 24010 24153 . + . ID=g10628.t1.exon7;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 24010 24153 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . exon 24396 24681 . + . ID=g10628.t1.exon8;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . CDS 24396 24503 . + 0 ID=cds.g10628.t1;Parent=g10628.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 24504 24681 . + . ID=g10628.t1.utr3p1;Parent=g10628.t1 #PROT g10628.t1 g10628 MPTDLKEYLYKVLVVGDIATGKTSMIKRYVHNIFSMHYKATIGVDFALKVINLDPETVVRLQLWDIAGQERFGNMTRVYYKEAVGAIIVFDVTRVSTFEAVQKWKNDLDQKVTLPDGSALPVILLANKCDLSKEGMVRNSAQMDRFCEEKGFVGWFETSAKENINIDKACKFLVQRILDNDRSSGSHNGQAGDSGKIDLNDAQAPKSGCCG* # PASA_UPDATE: g10634.t1, single gene model update, valid-1, status:[pasa:asmbl_9539,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 38221 43421 . + . ID=g10634;Name=g10634.t1 NODE_81_length_43628_cov_42.4499 . mRNA 38221 43421 . + . ID=g10634.t1;Parent=g10634;Name=g10634.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 38221 38451 . + . ID=g10634.t1.utr5p1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 38221 38728 . + . ID=g10634.t1.exon1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 38452 38728 . + 0 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 38866 38970 . + . ID=g10634.t1.exon2;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 38866 38970 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 39277 39392 . + . ID=g10634.t1.exon3;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 39277 39392 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 39623 39732 . + . ID=g10634.t1.exon4;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 39623 39732 . + 0 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 39973 40172 . + . ID=g10634.t1.exon5;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 39973 40172 . + 1 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 40407 40490 . + . ID=g10634.t1.exon6;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 40407 40490 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 40785 40910 . + . ID=g10634.t1.exon7;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 40785 40910 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 41154 41246 . + . ID=g10634.t1.exon8;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 41154 41246 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 41530 41640 . + . ID=g10634.t1.exon9;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 41530 41640 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 41964 42126 . + . ID=g10634.t1.exon10;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 41964 42126 . + 2 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 42319 42510 . + . ID=g10634.t1.exon11;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 42319 42510 . + 1 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . exon 42886 43421 . + . ID=g10634.t1.exon12;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . CDS 42886 43087 . + 1 ID=cds.g10634.t1;Parent=g10634.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 43088 43421 . + . ID=g10634.t1.utr3p1;Parent=g10634.t1 #PROT g10634.t1 g10634 MMAARRVIICAAVLLCVIAATSADGPGKYQDNDGVQLFVNKVGPYYNPSETYDFYSLPGVCRPDKVKKVEESLGEVLTGDRMQSSLFAIKFKEDLDNAKLCDKTLSAGDLERLHSAIEEWYYFEFVLDDIPMHGLIGSLEEQAFPHVHHVYLFTHFSFMFEYNGDRIIYANVTMDDGPELELTEGLDSIPIEYTYSVKWIQTTDTLSDRAKRLEHGVFMKSGEIHWISIFNSLVLVVLLTGLVGVILARVLNNDFARYSRVDAEAIEDDDASDYGWKLIHGDVFRFPAQKSMFCAILGAGTQFLALATFLIVMAIIGLFNIHNHGSMNSAAIVLYAMTSCISGYVSGSFYKKLGGENWVWNIMLTVSIFTVPVFLIWSLLNSLAWYYHSTQALPFTTIVLLLLMWLFVGFPLTVVGGILGKNQAGAFDAPCRTKNIPREIPPIPWYRSAAVQMFVGGFLPFSAISVELYYVFATLWGRAPYTLFGILFLVYLILLVVTAFISVALTYFQLSMEDYRWWWRSVLNGGCTGAFVFVYSLFYYFWRTQMSGTLQTAQFFGYTLLFCLVFFLMLGSVSFFSSLVFVRYIFKSLRTD* # PASA_UPDATE: g10624.t1, single gene model update, valid-1, status:[pasa:asmbl_9532,status:12],[pasa:asmbl_9533,status:12], valid-1 NODE_81_length_43628_cov_42.4499 . gene 5615 12791 . + . ID=g10624;Name=g10624.t1 NODE_81_length_43628_cov_42.4499 . mRNA 5615 12791 . + . ID=g10624.t1;Parent=g10624;Name=g10624.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 5615 5759 . + . ID=g10624.t1.utr5p1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 5615 5984 . + . ID=g10624.t1.exon1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 5760 5984 . + 0 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 6184 6824 . + . ID=g10624.t1.exon2;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 6184 6824 . + 0 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 7098 7269 . + . ID=g10624.t1.exon3;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 7098 7269 . + 1 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 7526 7636 . + . ID=g10624.t1.exon4;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 7526 7636 . + 0 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 7815 10536 . + . ID=g10624.t1.exon5;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 7815 10536 . + 0 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 10776 10938 . + . ID=g10624.t1.exon6;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 10776 10938 . + 2 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 11213 11308 . + . ID=g10624.t1.exon7;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 11213 11308 . + 1 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . exon 11701 12791 . + . ID=g10624.t1.exon8;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . CDS 11701 12508 . + 1 ID=cds.g10624.t1;Parent=g10624.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 12509 12791 . + . ID=g10624.t1.utr3p1;Parent=g10624.t1 #PROT g10624.t1 g10624 MASVAASDSAVPGKGSEDAPSPPAVDVQVDAPGDGGSREATPTTKEEEPVSVEPPEVIRQRELAFNSLDGAVRNVCESNGITKEKFVRGARSILALELFFFNMKRIEGLNQFVGLKELCIVVQDLEKIDGLDNLVVLEKLWICETKVSEMRGLSKLTNLRKLYMYANRITAIAGLATLTKLDTLWLFDNCIQAIEGLETLTNLVELDLSRNNISKIGNSLRKNVNLEMLHLSDNRISFFRDILDLAPLSRLRSLRLFDAHWDGNPVCKLANYTTFVLHHLSNLTSLDTQDVSDPAVRQQIETTFSRKAMYYSMRISTLRRNSNDVIAALEKEAMRRIQSIRQGLAKVYFQMRSIERELEDRNVQRKDPKTDPADPADRVIDAEKLRTKLKALRTRVDNREGEIQSLLNVLDRQRDHVNNICEVNARRLLIELGTGGNTQFEDGTPQEAWFSSCAELLQLRYTPTDQQVALGVASKLTESLAYSGVRVTRVTRIHSRPLRNAFDEKLENLFGGDIGRRGLNPAVPSPMATQAHKRFLEYCFFCWDPKMGDQMVETLRVCEFGFRTPHEYAAFGVQAGIPLTNSVNIAEVARLSSVMGSTLPAKADVARRGHLVIVKACFAKVSTLADGASIVPDKYGDSDCLMRVRHEDGCKERAIQPPPGKPNVRCKCRHREWFLLDPDLALPEYIVDFEYVGRGHSTDPSPYASVHVATASSEDKEQTSGGAQSSSDGTPRPKDVDRLRVSADSSGANSAGSSRSEVGPPPATPLTSIESEDNTGNPNVDVLELAPALKGRQKLVALSEDAMLRISGASWLSGIQSLNLHACGLARLEGLGALTTIKKLVVCFNRLTSIDGIAALPTLEYLDLGHNKIRKVDGIKGLVNLRHFDVSSNQLRKGDDLRTIRACLAPSLTWLDTRHNLFHEDGIFSARSLLVGKMKQLEVLDGVPVTAEEKGAAASGTGLERSPIAMATLRTVTALGDDLPRALWLPLSLEMNHNSCIQPPPEPDPKPDSQSHVWLTKVTCVDVSGLGLRQFGQFLESVPLVRWLRACNNRIKRIDGIERTPKVEELNLDHNELTKVDGLAAALPRLRKLSIGNNRLSSLEGMSSFANLTLLSVEGNGLRTIAGVEQLVCLSEFYAGNNHVANLKEVYRLKPLSRLAIVDLFGNPMSAESEYRAFVIYHLSRLRVLDGVGVETGEHASAADTYGGRLNADLLAERLGTSNMSNVAELDLPSLGLREVASNICECDFSALRSLNLEHNNLVSFGGLIYLPNVRVLCLNQNRIQTVVDDDQGLANQLLPTLEVLHLGYNNIKSLANLGLGRLRSLRCLFLQGNDLTRVDGLEGLSELRELVLDRNKIRGIDPQSFVHQTHLRELHIEDNRLKSLSHLWVLNRLQRLYLGLNRVHDMRELDKLEPLRLLAELSMVSNPVARKQMYRPTLVFLLRALLCLDGSDVTPEERTRADHYFLDQMGDLVGGTAVTNYLPSVPAGQRTLSSVPMAQASMQASIGRGLSGQTIQDNNAPDLRQASYGNNPVANISHPSTNTPLAVAPLTHFSLASTSSSSSTAHRQPQRGGGGGNGSQPQDSMPLGNARARIERVYAAAGVSTVQTAPRTTGLHHLIEGGVVALSGSSVGPAKGADGDGSKGRQKQ* # PASA_UPDATE: g10626.t1, single gene model update, valid-1, status:[pasa:asmbl_9534,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 15494 17868 . + . ID=g10626;Name=g10626.t1 NODE_81_length_43628_cov_42.4499 . mRNA 15494 17868 . + . ID=g10626.t1;Parent=g10626;Name=g10626.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 15494 15613 . + . ID=g10626.t1.utr5p1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 15494 15891 . + . ID=g10626.t1.exon1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 15614 15891 . + 0 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 16109 16206 . + . ID=g10626.t1.exon2;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 16109 16206 . + 1 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 16339 16496 . + . ID=g10626.t1.exon3;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 16339 16496 . + 2 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 16650 16804 . + . ID=g10626.t1.exon4;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 16650 16804 . + 0 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 17026 17138 . + . ID=g10626.t1.exon5;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 17026 17138 . + 1 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . exon 17305 17868 . + . ID=g10626.t1.exon6;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . CDS 17305 17558 . + 2 ID=cds.g10626.t1;Parent=g10626.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 17559 17868 . + . ID=g10626.t1.utr3p1;Parent=g10626.t1 #PROT g10626.t1 g10626 MAARAAVAVLAVLAAITTMSGAFASLTPRTPVILLTDIGTDIDDTWALAVLMQSSAYDIVLIVAESHNTPARAKVAAKFLEGTGRDSIPIALGIQQDETDSYLYGWAADYDLSTYKAGVVVDGVNALLNAIKQSTVPPVLVVLSPCPTLLAAYRQEPNTVALVRTVYAMMGSVRRGYKGASHPDSEYNVYDNVAAAAMLFDGASSGIYNLTVTPLDTCGIFQIDGESYDRFLRAAASTSAIAKLILESYVYWQPLVPWCTPEAPQPCEPHVRSSVIYDVVAIGMMEGFRSRKHLGFEQLAIDIVGNMTVIAPSGVPSTVATFWLSEKDVSHHSLSLTNFGDDVIECIISGC* # PASA_UPDATE: g10622.t1, single gene model update, valid-1, status:[pasa:asmbl_9540,status:12], valid-1 NODE_81_length_43628_cov_42.4499 . gene 228 1116 . - . ID=g10622;Name=g10622.t1 NODE_81_length_43628_cov_42.4499 . mRNA 228 1116 . - . ID=g10622.t1;Parent=g10622;Name=g10622.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 1108 1116 . - . ID=g10622.t1.utr5p1;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . exon 874 1116 . - . ID=g10622.t1.exon1;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . CDS 874 1107 . - 0 ID=cds.g10622.t1;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . exon 535 645 . - . ID=g10622.t1.exon2;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . CDS 535 645 . - 0 ID=cds.g10622.t1;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . exon 228 323 . - . ID=g10622.t1.exon3;Parent=g10622.t1 NODE_81_length_43628_cov_42.4499 . CDS 228 323 . - 0 ID=cds.g10622.t1;Parent=g10622.t1 #PROT g10622.t1 g10622 MSLHEANACTDADGAAEHNRANVMELVPWSSFTINGTPLLLKSSFSDVSGSYCIYLTRVLGSVWAERLRATSIEERCKKLNPGVELPFQQIIRIIRENIEVQSKNVVYRWSEKTPGDDSVCVLNLTLKLDVIDFQWSFECKKRQDR* # PASA_UPDATE: g10627.t1, single gene model update, valid-1, status:[pasa:asmbl_9535,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 18968 21815 . + . ID=g10627;Name=g10627.t1 NODE_81_length_43628_cov_42.4499 . mRNA 18968 21815 . + . ID=g10627.t1;Parent=g10627;Name=g10627.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 18968 19499 . + . ID=g10627.t1.utr5p1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 18968 19505 . + . ID=g10627.t1.exon1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 19500 19505 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 19604 19696 . + . ID=g10627.t1.exon2;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 19604 19696 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 19845 19907 . + . ID=g10627.t1.exon3;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 19845 19907 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 20160 20267 . + . ID=g10627.t1.exon4;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 20160 20267 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 20447 20599 . + . ID=g10627.t1.exon5;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 20447 20599 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 20790 20906 . + . ID=g10627.t1.exon6;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 20790 20906 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 21142 21254 . + . ID=g10627.t1.exon7;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 21142 21254 . + 0 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . exon 21567 21815 . + . ID=g10627.t1.exon8;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . CDS 21567 21645 . + 1 ID=cds.g10627.t1;Parent=g10627.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 21646 21815 . + . ID=g10627.t1.utr3p1;Parent=g10627.t1 #PROT g10627.t1 g10627 MEFDEEESPEVRKSSGQNVEMVLKVIVVGELGTGKTSVIRRWVHNAFTPNYRATIGVDFALKKLEIPGVATARVQLWDIAGQERVNNMTRIYYKDASAGIVVFDQTRWHTFNAVKRWKRDIDSKLRSPDGSPFPVILVANKADLPNSTFATKEALDAFCQENGFMAWYDVSAKTNLNIEESFGHLVRHVVEAGSRSPMSRLSVGASECGKIDLCGYSDENEGKRSSGCCSGGSFFFCKKSLPS* # PASA_UPDATE: g10625.t1, single gene model update, valid-1, status:[pasa:asmbl_9541,status:3], valid-1 NODE_81_length_43628_cov_42.4499 . gene 13037 15322 . - . ID=g10625;Name=g10625.t1 NODE_81_length_43628_cov_42.4499 . mRNA 13037 15322 . - . ID=g10625.t1;Parent=g10625;Name=g10625.t1 NODE_81_length_43628_cov_42.4499 . five_prime_UTR 15203 15322 . - . ID=g10625.t1.utr5p1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 15110 15322 . - . ID=g10625.t1.exon1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 15110 15202 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 14835 14915 . - . ID=g10625.t1.exon2;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 14835 14915 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 14373 14561 . - . ID=g10625.t1.exon3;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 14373 14561 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 14089 14234 . - . ID=g10625.t1.exon4;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 14089 14234 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 13814 13895 . - . ID=g10625.t1.exon5;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 13814 13895 . - 1 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 13439 13549 . - . ID=g10625.t1.exon6;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 13439 13549 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . exon 13037 13249 . - . ID=g10625.t1.exon7;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . CDS 13067 13249 . - 0 ID=cds.g10625.t1;Parent=g10625.t1 NODE_81_length_43628_cov_42.4499 . three_prime_UTR 13037 13066 . - . ID=g10625.t1.utr3p1;Parent=g10625.t1 #PROT g10625.t1 g10625 MTETIASKPLDWKTASETLQEWRKGGCRNSLETVTIGKALLDKHASKLGDDLWDVHEQVCRAALDIGNVDLAKKHAKALQMKFPDSLRVELLCGLINEADGRTELALAKYEGIIKRDASFLPAHRRKAAVFKSQGNTAKAIDTLTTHLKVFMADYESWAELADLYLSRGEYSLAAFCYEELIVSNPRNFQYHRRYAEILFAQGGSDNYLLARKYFSEAAVLAPGDARSLYGILMASAALANSKGSISKDDNAKVGDFAAKSLVRVYKAQSSPTLSIVEKMITSMQQQGGPSESS* # ORIGINAL: g9521.t1 original gene structure, not modified by PASA NODE_1538_length_10641_cov_39.5558 AUGUSTUS gene 9624 10533 . + . ID=g9521;Name=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS mRNA 9624 10533 . + . ID=g9521.t1;Parent=g9521;Name=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 9624 9813 . + . ID=g9521.t1.exon1;Parent=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 9624 9813 . + 0 ID=cds.g9521.t1;Parent=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 10006 10100 . + . ID=g9521.t1.exon2;Parent=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 10006 10100 . + 2 ID=cds.g9521.t1;Parent=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 10276 10533 . + . ID=g9521.t1.exon3;Parent=g9521.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 10276 10533 . + 0 ID=cds.g9521.t1;Parent=g9521.t1 #PROT g9521.t1 g9521 MPRIAAHDIDTSRARTRDVLVDGDADFASLLLSERAVAGLKGAGYKRPSPIQLKAIPVARSGLDVIAQAKSGTGKTCVFAVAALEAADASKTTPQAIIVAPTREIAVQIKDVISTIGASYAGIVAHVFIGGVSIAQDKTNARTCHIAVGTPGEGPRHTQTRMLICLFVVFVLGFFVYIAG* # PASA_UPDATE: g9520.t1, single gene model update, valid-1, status:[pasa:asmbl_1906,status:12], valid-1 NODE_1538_length_10641_cov_39.5558 . gene 5725 9072 . + . ID=g9520;Name=g9520.t1 NODE_1538_length_10641_cov_39.5558 . mRNA 5725 9072 . + . ID=g9520.t1;Parent=g9520;Name=g9520.t1 NODE_1538_length_10641_cov_39.5558 . exon 5725 5779 . + . ID=g9520.t1.exon1;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . CDS 5725 5779 . + 0 ID=cds.g9520.t1;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . exon 5906 7674 . + . ID=g9520.t1.exon2;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . CDS 5906 7674 . + 2 ID=cds.g9520.t1;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . exon 7956 8173 . + . ID=g9520.t1.exon3;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . CDS 7956 8173 . + 0 ID=cds.g9520.t1;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . exon 8448 9072 . + . ID=g9520.t1.exon4;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . CDS 8448 8685 . + 1 ID=cds.g9520.t1;Parent=g9520.t1 NODE_1538_length_10641_cov_39.5558 . three_prime_UTR 8686 9072 . + . ID=g9520.t1.utr3p1;Parent=g9520.t1 #PROT g9520.t1 g9520 MATGWADDVEIGIGDERNDGGVNVNSVVDDGLPWHLKDSVASPSRAASSSSLAGTRNSNPTSNPPSFSRISKGAEGISMSSNSAGSQSGQPPALAHSYPSRRSVFPESIIDVVADEDVSWVNAEDTPTPRMVLPHRVSVVPEDTTAERDIAPISPTEQRTRTISNAGNGGKRRMSTAGQWGEGHVEEADHSELRVRGLPKYYTMKDVCELLAPFGELQSVRTADPDANIDGDLEYNISSSRQTSLKELRANVQIGTTPTSDVTAGARKRKGLVYLIRFKDERATSCAFLSLGHVVIDNHRLQVTYINTRDPFWRAVNQRHRFPTKDGRLFNTRGTSLTVSVDDGPLPSRMSHDFGVDVDGTGRHGEGGEGGGGGDGGDRGGDRGCGDDRGLMDIGAAMERARLQRCLDFVDSIRVAFRPMGMVAGFLGFVPYSRMWKRREYIVMVYCVAVYLVAMFGIGSIWYGCYRSLRDRRSSGAIGEVALGLCALVHLVLYGLGVRVTNMRDKFRQLAHRLIDAQEVARLRRGVRIKAIITTTLFLLAWLCFSLALNFESPDFLDFLPPWARFVQALGTMYIFGACAVALNLSSSLRVLMTISVRRYGERVMRRQVDMDAVIFRYSDISLMVQNTSRMFSEYIVICFAVCVPMAIFAAYAIIESGGPPHLGTLLVIFISYVNFLGAFWYDTASPTREMGAILDNFKHMNAIVQYADSQRVQDFLNYTQHDVIGYRVLGFIINQRFGAGILYVGVYLIAVVSITKIT* # ORIGINAL: g9519.t1 original gene structure, not modified by PASA NODE_1538_length_10641_cov_39.5558 AUGUSTUS gene 1763 5085 . + . ID=g9519;Name=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS mRNA 1763 5085 . + . ID=g9519.t1;Parent=g9519;Name=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 1763 3123 . + . ID=g9519.t1.exon1;Parent=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 1763 3123 . + 0 ID=cds.g9519.t1;Parent=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 3227 3975 . + . ID=g9519.t1.exon2;Parent=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 3227 3975 . + 1 ID=cds.g9519.t1;Parent=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS exon 4280 5085 . + . ID=g9519.t1.exon3;Parent=g9519.t1 NODE_1538_length_10641_cov_39.5558 AUGUSTUS CDS 4280 5085 . + 2 ID=cds.g9519.t1;Parent=g9519.t1 #PROT g9519.t1 g9519 MPPVVACLTTDRMRAPSDSTDGVVGIEVCTSRSQTRSESRELGSRDMDTQNTTYHEDAAKVDPLCKEGARGLSSPGRAFIARNAATALVVLLVLAAGISGTTRGCLILNNEAEYSAREDFEASVGIASNVLDANLQRTWDYMHALTGYVQGRTNMTNAFFLNAPAILRPLDGDTEIMQTGYQPRVLDQDRASFERMVRAVNAEDYNNTFGNYRIRSTINASQPAAPKGEYIPNLYTVPPVQLGVVGVDVSFSQVRYAAVNKSRDSGDLVAVTPTLIIRGTPSVVVYAPLYVTGTVPTLVEYRRGNFSGIVVITVGLSKLVDRVMDWAEVSSVRLYIFDSTPGSPPALIHTPDSSSNATSPSDIPALSGLRATRTVSFADRTYTIVYVPIAGAYAVSHTKAIILGVFSSIGTLLATFIAIYLTQKYQRTSDVRHRALHERDLAEKERVSIVTMLGYMSHELRNTLNGQLALLELAIASLIPHVQSLDSPIAADADKTTKVCGEQPDCLVANGTAHMLRSLLQDLQTCDSLGQLVRSIINDVLDIRKMEEGLLELHETQTTVGEIVAEIQVIAAPIFGGKKHLKQTVVVDDNSLRSVHITVDAFKLKQVVLNFLSNAAKFTPDEPGNSVTFSVGHVTATGASALPVFGGRFVLRFSVTDTGRGIAEDKRGMLFRPYTQMEAADATRHGGTGLGLYLCALLVKLMHGHIGVSSMSGQGSTFWFDIPCGLVAATPQIEAKIRSCDADGMLKDDDTEPGVICLEEIVVAADDGPSANDGRLMTSDASPVPTERDMDGRRRLNGTFPGQPPTKTTQFRLDGPLMASGRLSNGEAGAALCLSDSTVNTLSSAPAPPRHLVHLVCDDGKINRIVLRRFLESFGDTVQEAENGRVAVDLVQSTRFDCIWIDTHMPVLDGISATLEIRQLDARVPIVGVTGSVGERSYASCVAAGMNSVLTKPISRAHIADQLKALRDHFN* # PASA_UPDATE: g11971.t1, single gene model update, valid-1, status:[pasa:asmbl_1037,status:12], valid-1 NODE_1270_length_12541_cov_43.1187 . gene 86 9751 . + . ID=g11971;Name=g11971.t1 NODE_1270_length_12541_cov_43.1187 . mRNA 86 9751 . + . ID=g11971.t1;Parent=g11971;Name=g11971.t1 NODE_1270_length_12541_cov_43.1187 . exon 86 6215 . + . ID=g11971.t1.exon1;Parent=g11971.t1 NODE_1270_length_12541_cov_43.1187 . CDS 86 6215 . + 0 ID=cds.g11971.t1;Parent=g11971.t1;5_prime_partial=true NODE_1270_length_12541_cov_43.1187 . exon 6398 9751 . + . ID=g11971.t1.exon2;Parent=g11971.t1 NODE_1270_length_12541_cov_43.1187 . CDS 6398 9378 . + 2 ID=cds.g11971.t1;Parent=g11971.t1 NODE_1270_length_12541_cov_43.1187 . three_prime_UTR 9379 9751 . + . ID=g11971.t1.utr3p1;Parent=g11971.t1 #PROT g11971.t1 g11971 LAINLRQCLDVYDACMEDPSFAVKWQTEFPSQCVVLTAQVSWARDTTKGLDSFNRDPSSYNLQRFRDRFRFELEEFQRALRGHISETRRLTLCALVTVCLHGRDVLDRLLVDGITSASDFEWLQELRYSWDRESRALSLNQADVSLDYGFEYIGCPRRLVVTPLTDRCRLAMMTAYSLHRGAVLSGPAGTGKTEIVKDLARSAGRHCVVFNCSLLVEMKIVARLLRGAVQSGAWACYDEMNRLGGELMSVFGQHVMTVQRALQAHEFKASKASDMRRMYGGSASAGQTKPIIVDKFMLDGRDVSLNPACALFATMNPGAVGRHVVPESLRSLFRPVAVAAVDHRTIAEVILLSEGFQTAPLLALRVGALFSLCVERMEPNARYDFGLRTRRSVYFAAGKMKRSNNESNNLSEDVIVMRAIYECLTPWLTKRDLALLSDFLEELFPGGLHLEACDSSLFKPLMQAMEDAGLVPSEELSEKCVQLYNMLNARQGVAIVGEAGCGKTVVREIIVRMLNKKGPDGGVQVDVAEIFPLAVTMAELFGFYNPALQEWNDGVVGKVVRRLLIERKTRTEKQWLVFDGPTDPMWMENLNSALDDTRVVCLASGERMDIPATLNLIFETDSLALASPATISRLGMVHISKRAMGWRAPLTTWVQAVTKRYAAIADVMKPLVDRFGEAAFDDTIGFLKKKRGFSSIETPVISKVQGFCLLFESLIEAEQASIRIVLDKTRVEGTEPPITKLLSLFAVFAFVWSFGGVFEDEDIRAQFDLHTRDLLPRAAPGVVVPDKDTLFDYCIDPYTPAFLDWRAQVSLLKPTRDAPAFNGHVVTVENFRYTCLTSLLVPTGASVMLVGQSGVGKTQIMRNYMHRYLPVDHTSTLIQATPAMTARDVQDHIECHLEQKRRNLLVPPNGKSALIAFVDDVSASASSSTDGKARPIFELARELMLTGSIYDKERWTSTKIRGVGFVATGRAVQPGMRAYDKRFSRLFFPLCVTEPSLRSQFDLLHPTIHTWLDGLPAYRLPNRDNMSRALALATVEIHAAIRKHLPASPSRPHYMFDLRALTRVVQGLLLLNPRPTANMKQDLGDMNVLVTTGESIVRMWAHEVARTYGDGFSRREDTDWLTMNIRGLLRRFFGADFADLDPFAVAFSHHFSPPHNSLHMTDGLYCEVKDFDEMGRLLTEAQSMFNVDKKEHLDMIFFRAALHTVARLGRILKMPGGHAILVGCGGSGRRSLVKLAAHLESYALLDIGGKHGKGSDVREELKQVVRNAGVKNKRAVLLLCEDEVGSEAVLDQHLGTLHSVVSHGTIHGLFDAAEIKTIADALRKSMRDTARDDSQDGIVEAFLLRATRNLHAVFCTSGTDGRLRHVAMRHPRLLSCSTVYFFKEWPSEALVSIAEKMVRGVEFPSDTLQDALAKIAAHIHETAMTMAARIRQETHVAAYVSPSMYSEMLKLFSNAAEKKRSILTSTATRLRTGLDRLQEAYKSVADMRLYVANLQPQLEEAAAKSEVLLEQVRAEQVEASKIRILVKADEAQVGRLVATVEAMREDAESDINHMRPQLDMAIEGIKNLDKHDLNELRMYVSPPEAVLSIMESVLLLLDSQPGWDEARKLLASDGIHFELEMIDKDNISDATLMKLRRYINSPSFQPNNVDKLSSRAARNFAHWVRAIASYSRLIRAAQPKRLRLKEAEKKLKTAKAALKEKQDQLGAIERRIDALQQEYDACLQRKLDFEKEIRLTRIKLDRADRVLQGLDTEALRWQKQIDETADTINAMHGSCLLTAAATAYFGQFKPRDRASLLSDWIRSCIVAGFSVSTDFALGDAIDTNEAEMWGVSGLTIDRHSLENAVIVRHSHRYPLLIDPDGQGTAWVRAIEGETQVRIVRAADATLTKAVETAVRQGYPLLIEDVKEHFLPADIMAIVGKDIRRERGRPVVWIGEIEVDVSPDFRLYMTCKTAQPRFLPVVFAKVSIVKYAATRDRVHESLLGRLMKLENPEADQQRSAVIVSLIDDRKLLAATETKMLQLLANAKGKLLEEDEVMDAIAVAKNSSVTIGARIRTSEEARIKLDQYRGYHAMVTERGGLLYSVLGGLKRLNPMYVFSFQSFVSLFERTVVECTVPRGVGTAAFPRIDALQRALTDNFHAMCCRGMFARHRIVFSLTLSCWIALSAGEIRADEWDFFVRGKLPPRPPSTLPPKPVVEIGGRPSSPASLSRAGGQEKRADPHLMKGASFFASHLMPQREEKASKPPEWMAAPTWAVCEELSQLPCFKGLSSSMIRNDTAWEEYFAKSPPSLSDPVPHDPVRMSSRSITPFQRLLLWRIVRPEQLSLLCKEMISSKLGAAWEMQGRSDTRSAFMEASPTVPILFILSAGADPIQSIQDYAREKGAVERMRILSLGSSQGNMAEEVLTAGARDGQWVVLQNCHLVPHWLKTLWQRYDEHVLKWSSSSQRAVHPEFRLVLTSMPTAEFPPPLLHQCLKVASEAPVGLRAHMLRALAELPAASFHEYPAESMPGPAREWRRLMYNVCAFHAITVDRLRFGSIGFTGWHGWNETDRAAALRILQRVVRAEVSRLGFTADCVPAPDLLVLRRFLCDMSYAQRVHDAVDLERLCAVYKRIFEPTKAQSGKPFAENSLEVADGSLLPDAYARYIESLSNVDNIEALGLASRAAEDQDTVRVKQLLADLSAIQPQSVVLRVLPPGAQGAASGGGGGSGQAEASSAPSASSNLPSMVQFVPLLARPEDDVPGMVRLLKDIEMKVPPQIPEIGDLPWDGFLPPVEAQILRNFIATERRAYNRLVARISSTLSMVRLGVTGMHTMTPDHDAVASALCKNVVPQCWADVSYPSNRTLGTWMADLARRMSVVRELSTKSLPACFALPMFFNPRRFLGCIRQLAYRRTGCSPDEMVFEVEVIAADPNLLACPPPTGVYVHGAYLEGAEWDTEFSCLADAGLGRGGTALPVVWLKPIGRDSIKVPEVTEETDEEEAKFLCECPIYFTTKRGPSQTDLCTPQFNSNFIATALVRCRQLPEYWQRKGVAIICQKDE* # PASA_UPDATE: g11973.t1, single gene model update, valid-1, status:[pasa:asmbl_1036,status:12], valid-1 NODE_1270_length_12541_cov_43.1187 . gene 11025 12416 . - . ID=g11973;Name=g11973.t1 NODE_1270_length_12541_cov_43.1187 . mRNA 11025 12416 . - . ID=g11973.t1;Parent=g11973;Name=g11973.t1 NODE_1270_length_12541_cov_43.1187 . exon 12200 12416 . - . ID=g11973.t1.exon1;Parent=g11973.t1 NODE_1270_length_12541_cov_43.1187 . CDS 12200 12416 . - 0 ID=cds.g11973.t1;Parent=g11973.t1;5_prime_partial=true NODE_1270_length_12541_cov_43.1187 . exon 11680 11762 . - . ID=g11973.t1.exon2;Parent=g11973.t1 NODE_1270_length_12541_cov_43.1187 . CDS 11680 11762 . - 2 ID=cds.g11973.t1;Parent=g11973.t1 NODE_1270_length_12541_cov_43.1187 . exon 11025 11515 . - . ID=g11973.t1.exon3;Parent=g11973.t1 NODE_1270_length_12541_cov_43.1187 . CDS 11336 11515 . - 0 ID=cds.g11973.t1;Parent=g11973.t1 NODE_1270_length_12541_cov_43.1187 . three_prime_UTR 11025 11335 . - . ID=g11973.t1.utr3p1;Parent=g11973.t1 #PROT g11973.t1 g11973 GIAPGASSEETTTREVKVVLEQLRVIEKPINVFQFVINPDSFSQTVENIFHLSFLIKDGHARMYIENELPFVVAVEGEESSGPTEQRKQSIFSMDVPQWRELISLLNITESIIPHREVTSDGQAYASTQYAGGGSQSQSQGQAGPAHDGEAAAPKKRRK* # ORIGINAL: g11972.t1 original gene structure, not modified by PASA NODE_1270_length_12541_cov_43.1187 AUGUSTUS gene 10011 10722 . + . ID=g11972;Name=g11972.t1 NODE_1270_length_12541_cov_43.1187 AUGUSTUS mRNA 10011 10722 . + . ID=g11972.t1;Parent=g11972;Name=g11972.t1 NODE_1270_length_12541_cov_43.1187 AUGUSTUS exon 10011 10220 . + . ID=g11972.t1.exon1;Parent=g11972.t1 NODE_1270_length_12541_cov_43.1187 AUGUSTUS CDS 10011 10220 . + 0 ID=cds.g11972.t1;Parent=g11972.t1 NODE_1270_length_12541_cov_43.1187 AUGUSTUS exon 10582 10722 . + . ID=g11972.t1.exon2;Parent=g11972.t1 NODE_1270_length_12541_cov_43.1187 AUGUSTUS CDS 10582 10722 . + 0 ID=cds.g11972.t1;Parent=g11972.t1 #PROT g11972.t1 g11972 MSGRVLGVGVGLFVLIILWVVAVVAGLAACRAKKARGVFAGALAVAVIITLILTLSPRKDANDSETDVATATDHTVVSRVALVVVMSICAFTSLLCMCKLHWMQPIYAGQQDNDLY* # PASA_UPDATE: g5673.t1, single gene model update, valid-1, status:[pasa:asmbl_8444,status:12], valid-1 NODE_6044_length_652_cov_94.1282 . gene 2 652 . + . ID=g5673;Name=g5673.t1 NODE_6044_length_652_cov_94.1282 . mRNA 2 652 . + . ID=g5673.t1;Parent=g5673;Name=g5673.t1 NODE_6044_length_652_cov_94.1282 . five_prime_UTR 2 3 . + . ID=g5673.t1.utr5p1;Parent=g5673.t1 NODE_6044_length_652_cov_94.1282 . exon 2 652 . + . ID=g5673.t1.exon1;Parent=g5673.t1 NODE_6044_length_652_cov_94.1282 . CDS 4 652 . + 0 ID=cds.g5673.t1;Parent=g5673.t1;5_prime_partial=true;3_prime_partial=true #PROT g5673.t1 g5673 STAAICDPNGGVCNCKAADNVEGDHCGACQKGFWNSVGDGKDSRNCAACACNGHKASSSNECEAAGGDCMKDFDGADQACEDNTEGSNCELCSAGFYRPCQEGGPHLTCTTVATQNCQACTCNGHPTTTVDGNGIDAECNAVGGNCTCTSDSNSQGPFCEECKPNTWNEDGNSEDGRNCKPCECYGHSTTCDSLGVCSGCVNNTENGVGNKCDVCK # PASA_UPDATE: g13385.t1, single gene model update, valid-1, status:[pasa:asmbl_8015,status:12], valid-1 NODE_5359_length_890_cov_33.2994 . gene 220 817 . - . ID=g13385;Name=g13385.t1 NODE_5359_length_890_cov_33.2994 . mRNA 220 817 . - . ID=g13385.t1;Parent=g13385;Name=g13385.t1 NODE_5359_length_890_cov_33.2994 . exon 620 817 . - . ID=g13385.t1.exon1;Parent=g13385.t1 NODE_5359_length_890_cov_33.2994 . CDS 620 817 . - 0 ID=cds.g13385.t1;Parent=g13385.t1 NODE_5359_length_890_cov_33.2994 . exon 220 379 . - . ID=g13385.t1.exon2;Parent=g13385.t1 NODE_5359_length_890_cov_33.2994 . CDS 220 379 . - 0 ID=cds.g13385.t1;Parent=g13385.t1;3_prime_partial=true #PROT g13385.t1 g13385 MFSLQTCAFAYWWLAVIDQGGIFKNAKLLPYQISNACPDKGYNVLDIAFFAFLGCVTGVGGALFNKISLTLFKLRKQHIVHTPVRQLMEALFVILLTSTITMGVPYLWSCTDVTNLVKQ # ORIGINAL: g7543.t1 original gene structure, not modified by PASA NODE_4342_length_1779_cov_44.0933 AUGUSTUS gene 482 1344 . + . ID=g7543;Name=g7543.t1 NODE_4342_length_1779_cov_44.0933 AUGUSTUS mRNA 482 1344 . + . ID=g7543.t1;Parent=g7543;Name=g7543.t1 NODE_4342_length_1779_cov_44.0933 AUGUSTUS exon 482 1344 . + . ID=g7543.t1.exon1;Parent=g7543.t1 NODE_4342_length_1779_cov_44.0933 AUGUSTUS CDS 482 1344 . + 2 ID=cds.g7543.t1;Parent=g7543.t1 #PROT g7543.t1 g7543 TDINPISALLLQGTYDIVNNLGSLVPRFVFQPIEESFYVFFTRVIKREDGLGALQPKDRLDLAASTYATLLRTMLTVGLVIACFGQAYSPLLLRMYGGSALATDAAVNILRWYCVYVLVMSLNGVAECFYHAVAPKSALEVYNRVMVAVSAVLLVASIYLVDWMGASGFVAANCIAMGLRGTYCFTYTRLYFIGTPHADLLRHCLPSSHIIAALALSAALTLASRVPIEAVLGAGLLGSAGHVGVGLLCLSGTVLVALATDHAFVSNAVNLFVSRGAAITVSEKTE* # ORIGINAL: g2133.t1 original gene structure, not modified by PASA NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS gene 2902 7177 . - . ID=g2133;Name=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS mRNA 2902 7177 . - . ID=g2133.t1;Parent=g2133;Name=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 6755 7177 . - . ID=g2133.t1.exon1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 6755 7177 . - 0 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 6267 6441 . - . ID=g2133.t1.exon2;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 6267 6441 . - 0 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 5707 5932 . - . ID=g2133.t1.exon3;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 5707 5932 . - 2 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 5219 5369 . - . ID=g2133.t1.exon4;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 5219 5369 . - 1 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 4937 5044 . - . ID=g2133.t1.exon5;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 4937 5044 . - 0 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 4596 4710 . - . ID=g2133.t1.exon6;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 4596 4710 . - 0 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 4296 4390 . - . ID=g2133.t1.exon7;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 4296 4390 . - 2 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 3925 4015 . - . ID=g2133.t1.exon8;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 3925 4015 . - 0 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 3607 3631 . - . ID=g2133.t1.exon9;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 3607 3631 . - 2 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 3089 3169 . - . ID=g2133.t1.exon10;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 3089 3169 . - 1 ID=cds.g2133.t1;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 2902 2971 . - . ID=g2133.t1.exon11;Parent=g2133.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 2902 2971 . - 1 ID=cds.g2133.t1;Parent=g2133.t1 #PROT g2133.t1 g2133 MDNIDPIERMRSSTEHSPTGDISSGARKSCWMNVLPESHTYPRLAENISCDVCVVGGGLAGLSVAYYLACENANVVLLEDGIIGSGESGRTTAHLMRYQDDGFCKIEKMLGAEAARLACESHTKAVDEIERICRQENIECEFERLDGWLIRAPHTDPDGSTILNEYKAATRAGHVDAELWDNAPIKDYQTGTAIRFKNQGQFHPYKYMIGLAEAATRRGCRIYNRSHASEYEGDGVERRTTTSDGFVVTSRSVVFCTNAPINDKLIVMAKMEPNRTYAIAAIVPKGVVSRALYWDTDTPYHYVRVTPRPGSDDTEWLVVGGEDHEVGMLQSGFQARYDRLEQWARERWPAMGRVEMRWSGQVQEPLDCMAYIGRNPMSHNNVYICTGDSGQGMTHATIAGFLLRDLILNRPNPYTKLYDPSRLTLKTMPELATHTLHINMQYKDYLRGGDVADIEDIPLCSAGRLSGLEGHGSRFDRYGTVVDGPSHVGLYPMPTTKVGGEKAAAAQGEESAARAPSEE* # ORIGINAL: g2132.t1 original gene structure, not modified by PASA NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS gene 534 2404 . + . ID=g2132;Name=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS mRNA 534 2404 . + . ID=g2132.t1;Parent=g2132;Name=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 534 568 . + . ID=g2132.t1.exon1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 534 568 . + 0 ID=cds.g2132.t1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 767 867 . + . ID=g2132.t1.exon2;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 767 867 . + 1 ID=cds.g2132.t1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 1065 1174 . + . ID=g2132.t1.exon3;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 1065 1174 . + 2 ID=cds.g2132.t1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 1331 1405 . + . ID=g2132.t1.exon4;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 1331 1405 . + 0 ID=cds.g2132.t1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 1798 1914 . + . ID=g2132.t1.exon5;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 1798 1914 . + 0 ID=cds.g2132.t1;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 2228 2404 . + . ID=g2132.t1.exon6;Parent=g2132.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 2228 2404 . + 0 ID=cds.g2132.t1;Parent=g2132.t1 #PROT g2132.t1 g2132 MTTTAPSLAQQIYAAAKAKGVASIDAPVSGGDIGAREARLSIMVGGDEPAVTAVMPLFQAMGQRIVHQGAAGNGQHTKMCNQIVLVQSTIGMCEALIYGHKAGLDLEVMISSVGKGAAACWVLDNLAPRILKRDFEPGFFVEHLVKDLKIALEEAQNMNLCLPGLALVSQLYTSVMANGGARKGSQSLISALEHLNNVTVNKKA* # ORIGINAL: g2134.t1 original gene structure, not modified by PASA NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS gene 8665 10029 . - . ID=g2134;Name=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS mRNA 8665 10029 . - . ID=g2134.t1;Parent=g2134;Name=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 9306 10029 . - . ID=g2134.t1.exon1;Parent=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 9306 10029 . - 2 ID=cds.g2134.t1;Parent=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 8992 9107 . - . ID=g2134.t1.exon2;Parent=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 8992 9107 . - 1 ID=cds.g2134.t1;Parent=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS exon 8665 8765 . - . ID=g2134.t1.exon3;Parent=g2134.t1 NODE_1643_length_10029_cov_37.857_potentialcontaminant AUGUSTUS CDS 8665 8765 . - 2 ID=cds.g2134.t1;Parent=g2134.t1 #PROT g2134.t1 g2134 QPHAFGQQQLQQQQQQQQQQQQQQQQQQQQLQQQQQQQLQAQQGKMQQQQPAFGAVLDGSRPKTSDPRREGDAPGPAFAGIGGLARQAGQPTQVSVAPAAAQQQPQPMLSQKEKEQSALAKILQRQQSNDSSFDESSAADAPAQPQQSSQQPQNRMVVRPAADDDDGDDYDYDDEEDERERERKERADALRNSTGPAKSTSMVGELKDRLRARKAISEGDDHEDLTVSPIDSEDDGRGTGRGASVSKPVLGGGKKKEDAIVNFSDDDEFDDILNSSHSRDLGVGAAADSKKPAFAMKKSAIDDIDFEDLDEI* # ORIGINAL: g14023.t1 original gene structure, not modified by PASA NODE_2650_length_5549_cov_38.5047 AUGUSTUS gene 823 5409 . + . ID=g14023;Name=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS mRNA 823 5409 . + . ID=g14023.t1;Parent=g14023;Name=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 823 1431 . + . ID=g14023.t1.exon1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 823 1431 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 1733 1834 . + . ID=g14023.t1.exon2;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 1733 1834 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 1957 2035 . + . ID=g14023.t1.exon3;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 1957 2035 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 2210 2360 . + . ID=g14023.t1.exon4;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 2210 2360 . + 2 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 2621 2820 . + . ID=g14023.t1.exon5;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 2621 2820 . + 1 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 2991 3073 . + . ID=g14023.t1.exon6;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 2991 3073 . + 2 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 3278 3469 . + . ID=g14023.t1.exon7;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 3278 3469 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 3694 3915 . + . ID=g14023.t1.exon8;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 3694 3915 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 4141 4274 . + . ID=g14023.t1.exon9;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 4141 4274 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 4405 4507 . + . ID=g14023.t1.exon10;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 4405 4507 . + 1 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 4875 5020 . + . ID=g14023.t1.exon11;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 4875 5020 . + 0 ID=cds.g14023.t1;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS exon 5223 5409 . + . ID=g14023.t1.exon12;Parent=g14023.t1 NODE_2650_length_5549_cov_38.5047 AUGUSTUS CDS 5223 5409 . + 1 ID=cds.g14023.t1;Parent=g14023.t1 #PROT g14023.t1 g14023 MPGRGKNNRSNGQNGGSSAQTQSQPVPDSTRPAANGSKASVPLNGSASKSKATEDREAQQATAAAPPKSVWVSYPDNSKTAFTSIGGCVGAPSQANAPATRDIHPVSPNNTIKGPDFGFDMASVDDGRPKLGRKQISLRGFPELKTVNEVKQAFNRHVHYTLAKDRNVATKHDYFLALAHTVRDQLVNRWIRTQQAYYEKDPKRVYYLSLEYYMGRTLTNTMINLGIQNECEESMYQLGLNIEELEEVEEDAGLGNGGLGRLAACFLDSMATMALPAYGYGIRYEYGIFTQRIVNGAQIEVPDEWLRRGNPWEIARPEYQIPVRFYGQVVVKEGPRFEWVDTQTVMAMPYDSPIPGFGNKNVNLLRLWSAKAPNSFDLSYFNHGDYMRAVIDRNLAENISRVLYPNDNFFEGKELRLKQEYFMVSATLHDIVRRYKASKFGSREITRTHFADFYKKVAIQLNDTHPSLAIPELMRIFVDEEGIEWDVAWDVCVKTFAYTNHTILPEALERWPVRLLETLLPRHLQIIYEINRRHLEDVQERFPDDMERVRHMSLIEEDGEKRVNMANLSIVGSHAVNGVAQIHTDILKAKTFRHFFEMWPEKFQNKTNGITPRRWLLLCNPGLAQVITDRIGMGWITDLYELRNLAKFADDADLQAAVFKAKQDNKTKLAIHIRDDYGVDINVESLFDCQVKRIHEYKRQLLNAFHIMTLYNRMYSCRRVILTPFVGLCLHSLVA* # ORIGINAL: g217.t1 original gene structure, not modified by PASA NODE_2915_length_4753_cov_38.8281 AUGUSTUS gene 463 1951 . + . ID=g217;Name=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS mRNA 463 1951 . + . ID=g217.t1;Parent=g217;Name=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS exon 463 537 . + . ID=g217.t1.exon1;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS CDS 463 537 . + 1 ID=cds.g217.t1;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS exon 857 1009 . + . ID=g217.t1.exon2;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS CDS 857 1009 . + 1 ID=cds.g217.t1;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS exon 1208 1393 . + . ID=g217.t1.exon3;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS CDS 1208 1393 . + 1 ID=cds.g217.t1;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS exon 1678 1951 . + . ID=g217.t1.exon4;Parent=g217.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS CDS 1678 1951 . + 1 ID=cds.g217.t1;Parent=g217.t1 #PROT g217.t1 g217 RFNFDMRKVEPGMPYFPLLTLSDVVYNPPVMDGNVFETASASAQREYSGDRNKTASMTDVCAACGSGSGKRRHCTGCIETRYCSVDCQRTDWPRHRAACKLGAARSESIELRSMLRTVPLVFINTRHEALEAPSEDLRTYNTDGRRFIVKVQNNEVDFNPKQQLRLYDSSRRLDGFFCNERIAKLIASDGILGANGLTSRKLFLWAISDGSDNRVRLYLRDYAPSQPW* # ORIGINAL: g218.t1 original gene structure, not modified by PASA NODE_2915_length_4753_cov_38.8281 AUGUSTUS gene 2458 4248 . + . ID=g218;Name=g218.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS mRNA 2458 4248 . + . ID=g218.t1;Parent=g218;Name=g218.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS exon 2458 4248 . + . ID=g218.t1.exon1;Parent=g218.t1 NODE_2915_length_4753_cov_38.8281 AUGUSTUS CDS 2458 4248 . + 0 ID=cds.g218.t1;Parent=g218.t1 #PROT g218.t1 g218 MGELSVEVIRGRDRFPVIVPPTATVREFQALVHASTNVLPEHQKLVCSGKTLFVGVDAHHTSVDECGIRSGMKILLVGSTPGDIEKTATQHVATHSASEGRRTGGAPVARIQSTSALLGAWYPPGRDEYGFQSIAVIDAFTNPPASEARALLERLASDPGILSVMRSHRWRVGVLSELIPKGKVGISEVCLLGYNRNRGMEISLRIRTDDLRGFRYYDTIRRVLLHELTHMVHDEHGIEFNELCSSLTREATEGDWTRSTGRLLIGGSYADAPPSSIGSGTASGTISGDGEYVLGRSPSTSVRGGAVRDRMAAAALGRAGAVPQKAPRHTHESRDNTTSVGTEQHKSPPLTNPLNIDREARHKADGTPDDNDVRLIVSGDTSSHVCSGSPSTARSQSTEECHTHAQDDVNRSGASEISVDIPHKLTTASHVGGSDAVPMEIDTDGDATLDAAFADAESVARVRTMRNHLVSLSSTLSKNGAALVAALETLRRIIGNVIDHPRDDKYRRIRTSNSSFYSRVGKYTDAIAFLTGAGFALSDGQGGGGQDGDLRLYRDDPGLLWMAAGILDDLLSRVSPSASSSSDLHLQSPAPLSADR* # PASA_UPDATE: g9175.t1, single gene model update, valid-1, status:[pasa:asmbl_3973,status:12], valid-1 NODE_22_length_62138_cov_42.6759 . gene 9925 12819 . - . ID=g9175;Name=g9175.t1 NODE_22_length_62138_cov_42.6759 . mRNA 9925 12819 . - . ID=g9175.t1;Parent=g9175;Name=g9175.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 12790 12819 . - . ID=g9175.t1.utr5p1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 12747 12819 . - . ID=g9175.t1.exon1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 12747 12789 . - 0 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 12263 12573 . - . ID=g9175.t1.exon2;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 12263 12573 . - 2 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 11950 12055 . - . ID=g9175.t1.exon3;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 11950 12055 . - 0 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 11456 11615 . - . ID=g9175.t1.exon4;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 11456 11615 . - 2 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 11102 11226 . - . ID=g9175.t1.exon5;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 11102 11226 . - 1 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 10606 10802 . - . ID=g9175.t1.exon6;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 10606 10802 . - 2 ID=cds.g9175.t1;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . exon 9925 10425 . - . ID=g9175.t1.exon7;Parent=g9175.t1 NODE_22_length_62138_cov_42.6759 . CDS 9925 10425 . - 0 ID=cds.g9175.t1;Parent=g9175.t1 #PROT g9175.t1 g9175 MRRQIVFIHPDLGIGGAERLVVDAALALQLRGHSVCIYTSHHDKTHCFVETRDGTLDVRVHGDWLPRHLLGRMYALCAYIRMIYLAIVLLFGVGRAADVVVADQISACVPILRLCRGKVFFYCHFPDQLLTQRRSLAKRLYRAPLDWLEERTTGLAHRVFVNSHFTAATYAETFTSLRSAPTVLYPSINFTAFDARPQPMDDIVSTRAAVVFLSINRYERKKNIGLAIEAFAAVRRRAGATDTHLVIAGGYDDRVTENKEHYSELVERATQLGVVDHVTFIRSFTDAQKRGLLERSACLVYTPDREHFGIGPLEAMYCERPVIAVNSGGPLETIADGVTGFLRPPTSDAFAGAMEAIARDRPAALRMGKAGRERVIRLFSFESFSSQLDSAVSEALGTAPAGGVARGDHVTQGKAKGRSRSPARKQGQSHNAHSAHSTHSTHSTHSANPNPPTATPTATPTAMGAAGGKGGVRTRKGGKR* # ORIGINAL: g9180.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 30897 31589 . + . ID=g9180;Name=g9180.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 30897 31589 . + . ID=g9180.t1;Parent=g9180;Name=g9180.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 30897 31589 . + . ID=g9180.t1.exon1;Parent=g9180.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 30897 31589 . + 0 ID=cds.g9180.t1;Parent=g9180.t1 #PROT g9180.t1 g9180 MARTQLAGPNVGNGQIHNANARVLGARRVAAGGMCIFFAAAAYVQLNDPDPLFWACIYGVSSLVCARVSAAPDPGPATASVSAAVGGVALATGFLLLPAATARGVGSIVEIEEGRECLGMLVTCAWMATVVLWCRTRTAPHPAMKSPPRNEGFLVHSGRLVVLQRLVSHSQQGCDGMLLAAAYACMVVAVGGWYMLPSHLLSRGAALCGGGTGGSDGQTGQTGHTWATHK* # ORIGINAL: g9172.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 182 2241 . - . ID=g9172;Name=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 182 2241 . - . ID=g9172.t1;Parent=g9172;Name=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 1954 2241 . - . ID=g9172.t1.exon1;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 1954 2241 . - 0 ID=cds.g9172.t1;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 1617 1823 . - . ID=g9172.t1.exon2;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 1617 1823 . - 0 ID=cds.g9172.t1;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 1105 1402 . - . ID=g9172.t1.exon3;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 1105 1402 . - 0 ID=cds.g9172.t1;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 182 803 . - . ID=g9172.t1.exon4;Parent=g9172.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 182 803 . - 2 ID=cds.g9172.t1;Parent=g9172.t1 #PROT g9172.t1 g9172 MAAPLPGMSASYLAATCAVVDVLHQQRVDPERGLAHVEAGVRRLKHGENDFDVTDKEPIWKKFIEQFKDPLIMLLLASAIVSVVMRQFDDAVSITVAVVIVVSVGFVQEYRSEKSLEALSKLVPHRCHCLREGQLIDMLATDLVPGDIIQISIGDRVPADIRLFEAVDLEVDESMLTGETMPSVKHTRVIIDSEDEKHPLADRKNVAFMGTLVRNGRGKGIVIGTGETSEFGVVFHLMREVEDRKTPLQSRMDELGKKLSIFSFAIIGLIVVIGLFQKRNLLEMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNAIVKKLPGVEALGSASVVCVDKTGTLTQNEMTVTQIFAPREQDTCDVTGVGYSASGTVLLRGQTVDLSSHPHVAKVLQVGSLCSNAQLRDGELLGQPTEGAILAAAFKMGLGDQRRMYERTFELPFNSDQKWMAVRCRAREGTADQELFYVK # PASA_UPDATE: g9174.t1, single gene model update, valid-1, status:[pasa:asmbl_3986,status:3], valid-1 NODE_22_length_62138_cov_42.6759 . gene 7244 9818 . + . ID=g9174;Name=g9174.t1 NODE_22_length_62138_cov_42.6759 . mRNA 7244 9818 . + . ID=g9174.t1;Parent=g9174;Name=g9174.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 7244 7444 . + . ID=g9174.t1.utr5p1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . exon 7244 7636 . + . ID=g9174.t1.exon1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . CDS 7445 7636 . + 0 ID=cds.g9174.t1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . exon 7759 7932 . + . ID=g9174.t1.exon2;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . CDS 7759 7932 . + 0 ID=cds.g9174.t1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . exon 8156 8669 . + . ID=g9174.t1.exon3;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . CDS 8156 8669 . + 0 ID=cds.g9174.t1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . exon 8906 9818 . + . ID=g9174.t1.exon4;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . CDS 8906 9387 . + 2 ID=cds.g9174.t1;Parent=g9174.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 9388 9818 . + . ID=g9174.t1.utr3p1;Parent=g9174.t1 #PROT g9174.t1 g9174 MKRSFFDIDKMRRNSHVVLIAAIVMVLSPVLLFLAFGGDSWKALPVWAGSHAVADFAIPSAHSTTLCGVTEAASIGTLPDVIDAIKKCDGENERFIAEAFDRIYIVNRREGSLNIPDTFAPKVRKWLGNNEAAYAQVFRQRIVSVMNKYTGENSIFNPLRALRPGANTGGDSVAYVDGKVEETQGTCDFCNYKEQTAADVFGRVEGRFSVTAANTFKYDGFHGLVLFRSHHPLHFNRAEFLDFCETAAEWFRRAHARDTRYVYPHLMWDLLPKASASQLHPHAQASLSPDRYYGMGETFRAALTSYARDTAGRNYFVDLISLHDGLGLSVHHGDAVAIAHLTPKKEHEVMVIAPSLSRDLAVLLHAVLRAFIDDAGIYAFSLGAFFPPMTPSATGEPSLPAVVRVIDRGAPTSDRSDISAMELFAASNVNADPFKVAAKIRDAVRKKLADETA* # ORIGINAL: g9177.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 20049 21296 . + . ID=g9177;Name=g9177.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 20049 21296 . + . ID=g9177.t1;Parent=g9177;Name=g9177.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 20049 21296 . + . ID=g9177.t1.exon1;Parent=g9177.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 20049 21296 . + 0 ID=cds.g9177.t1;Parent=g9177.t1 #PROT g9177.t1 g9177 MSKHVSGRRWHVSMCIGLVMVLSLMGLAVGGPTLDVALSSANANFTLTLTFSGYSQLELELGRCVSLGITASPNTRALNSSAMVACGYALLNTGSAVVLNGSIGVYSRTTNQRVHLFVGTLALSTPLNSTAMLTTVEVLEVASASVQVTAALPASLSACDQSVNGSAFAITVGSSVCLRMRLLVPKGIVLGYRQVTAASLRRSDTGAVVGDLLQSVANVVDTISTDASLVLWVAVGSVPCAQCDIRVSVSLYASVNSKRREAGLITGGESDGAVTATAGGNFSNALVYKSHGVLAASVTGGSADGGDGGGGLSRDAAVGIAAGVAGCVAVASACSVACVIVRRRRRMAAGGGRGDHVLPAVKIGAGVVYSGVLITPHGSRRSTLDVVNTYAGVGGEEDDSACDYLGDPQHSPVNV* # PASA_UPDATE: g9176.t1, single gene model update, valid-1, status:[pasa:asmbl_3982,status:12],[pasa:asmbl_3983,status:12],[pasa:asmbl_3987,status:12], valid-1 NODE_22_length_62138_cov_42.6759 . gene 13365 18981 . + . ID=g9176;Name=g9176.t1 NODE_22_length_62138_cov_42.6759 . mRNA 13365 18981 . + . ID=g9176.t1;Parent=g9176;Name=g9176.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 13365 13703 . + . ID=g9176.t1.utr5p1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . exon 13365 15223 . + . ID=g9176.t1.exon1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . CDS 13704 15223 . + 0 ID=cds.g9176.t1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . exon 15481 17645 . + . ID=g9176.t1.exon2;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . CDS 15481 17645 . + 1 ID=cds.g9176.t1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . exon 17895 18088 . + . ID=g9176.t1.exon3;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . CDS 17895 18088 . + 2 ID=cds.g9176.t1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . exon 18460 18981 . + . ID=g9176.t1.exon4;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . CDS 18460 18744 . + 0 ID=cds.g9176.t1;Parent=g9176.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 18745 18981 . + . ID=g9176.t1.utr3p1;Parent=g9176.t1 #PROT g9176.t1 g9176 MRAGAGEDAWAEGTTDASQDASAAAPSATRSTAWGDAGDKKSPASASPARVRAGISPSGGTNGDELVVVTTSYVDEDGGNEEEGDEEDGYGDEDEDEQAAEEERKRNEVNPWTLRYKDPEVETAYRLSRTEQTRIVYRAILAVLTVGFLIFFTLMVLGMFGTDDNANSYKEYYGIPLFMFVLSLAVLVSFEKWTRARALILQFHESFALVFGTLLILQSVIVLGLVGEGSFSPTMWLIQQGVCAVLEGVVVTVRLYAIMIVALTLQHSLAFYLPGASTIMVLLPLFGAMSFALMAVYVMDRSFRKVWSHRLCVEARSRSLRSERTQLEALARLQLPESVIVKLQTEAAQAVAVGGHTSLDGRSKAGRAGSEGMAQRVPVVTVIFVELYGWDKTVQAQDPDSAITLLNTIFTWMDALSAQHGLEKIKTIGSVYLAACNIPDPKADHTEATARFALELLRDWKAESARQGLARLDLRIGISRGEVVAGIVGDLKFCYDIYGDTVNTASRMCKFALPNHIQCTGEVASTLRASPEGFRLENAGKQEIKGKGVMETFNLVGDGTDCAAADAAPAPGAMGGAMGARVGKWAMLRQKIATEKVSRLGKLLGFTDPEGAPSAPTPGPRTDTAGTPGHAGSHLPPGHVPLPGAMDADSLLAAQEEAFGAAVPVVADGALARPTRRQRRISVINGINTTSLRRAVARRNSTVNNGGRLSGIGESKVSLTSSSSSSIANMASMLNNASSIASVHSVTKLAKPGNNANGGNGGNGEIEFRPSYASILFPSANSAMDMQNLGVSFSNIPTRSAAMLNVETGTPTLAPPSPRLLAADPLRSASASGLASPAPEKLNIVASPQPTSTSTARARKVSTMVGTPKLQAQPSRNSVSTSRSASEFGGTNGGGGPAIIRRQEALASALGGEDGTVARQLNQLRTVTTHRFSLRFGDASIERAFVLHYAGKQRSTLIWFLFVCFAYNVILVVCDLVSDADPAEKRTILKVRLIGASLVCGIPAAVLAFVPRAMRHSQKIAVCFLVAIVAVNYTAILLNSQLSYDWPPGENFYGPNTTVLLLNTMALALPGLLFRHALGLVCCHAVTILIIYGVSGAKLYLFDLAFAAFSLIVVVLVRYVFEKFVRAHFVLTETARVQQNELEREKAMGEHLVHNILPPSIARLLASDPNCKTARFFPSVTVLAMDIAGFTAMSSKMTAENVVAMLNDLFCRFDALVLAISVEKIGTIGDAYIAACGAPEECIDHRDRIILLAMGMLRVIEERNDGLVDSMPRVSVRIGIHTGSCFGGVMGGQLRFKYDLYGRAMAIAQVLEQTGTPTCAHVSDATLVESSLLDPAIAELSGIEQSASGPFLANFAGTEETLETFLLRPIIDGMPAMSTLVPNTAHH* # PASA_UPDATE: g9185.t1, single gene model update, valid-1, status:[pasa:asmbl_3985,status:12],[pasa:asmbl_3988,status:12], valid-1 NODE_22_length_62138_cov_42.6759 . gene 47311 53940 . + . ID=g9185;Name=g9185.t1 NODE_22_length_62138_cov_42.6759 . mRNA 47311 53940 . + . ID=g9185.t1;Parent=g9185;Name=g9185.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 47311 47651 . + . ID=g9185.t1.utr5p1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 47311 47743 . + . ID=g9185.t1.exon1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 47652 47743 . + 0 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 47928 48265 . + . ID=g9185.t1.exon2;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 47928 48265 . + 1 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 48402 49095 . + . ID=g9185.t1.exon3;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 48402 49095 . + 2 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 49305 49629 . + . ID=g9185.t1.exon4;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 49305 49629 . + 1 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 49906 50028 . + . ID=g9185.t1.exon5;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 49906 50028 . + 0 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 50212 50297 . + . ID=g9185.t1.exon6;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 50212 50297 . + 0 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 50404 50578 . + . ID=g9185.t1.exon7;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 50404 50578 . + 1 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 50697 50924 . + . ID=g9185.t1.exon8;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 50697 50924 . + 0 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . exon 51074 53940 . + . ID=g9185.t1.exon9;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . CDS 51074 53866 . + 0 ID=cds.g9185.t1;Parent=g9185.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 53867 53940 . + . ID=g9185.t1.utr3p1;Parent=g9185.t1 #PROT g9185.t1 g9185 MVGFLRPPEAPVFRPTSEEFANPLTYILKIRPVAEKAGICKIIPPAGWKPPFSINPTTFRFRTRLQRLCELEGTSRVRLLFRERLATFWELQGIENFREPIVEQRTVDLFRLHKEVEKRGGFQAVCTKSLWVDITKALGYSTHAGARPSTTAYFLRKNYERFLSPYDMFIERVKNGDSDSQDTEKAIMEARRGDAAPSMRSMKREPVLADVMVKEEIVPLALKTEDGAEVPRRRVRVAPVLSVPSPGQAVGNDAVELCKVCGHGHDEDSLLLCDGCDAPYHMYCLSPPLSKVPRGDWHCPECLREHVSVNEGAYGFEDSGLHSIDSFKRLAERFEAEHFRGDRRSGEELEREFWSLVSNPEKDVAVHYGADIHTSKTGSGFPTKATAMPENQSYVTHGWNLNNIPVLPESVLGYIRTDISGMMVPWLYMGMCFSSFCWHYEDHWSHSVNYLHFGQPKTWYGVPGSASDSFERAMRESVPELFEGNPDLLFQLTTLISPGALIAKGVPVCRTDQREGEFVITFPRAYHAGFNNGYNCAEAVNFATYDWMPLGMRCVETYRSLGRSPVFSHDELLCNIAVGGDDVNIAIALQAKRELKQRVAWEFDKRDALAKWGVTKAELCEIERLSDDERECVVCRMASYWSCVACSCKPKRMACLDHAKELCPCAPANKTLLLRHSVAEMDALVAKLQSRADRVVDFDKEAMQLLAVSGDGAAKPSIRALKTTLNAARRLIASLGAIVDGQEALFSLASLGPLDTAVSASEAVRQSGLSLLGRMQRTRSEKEDLPSLDEVSAWITAADAAPSDLGDLIARMTKIKDRAVAFQVRATAFLASKDMFTGDFDEVARMVDLAEALDVRVDEAQSVRECFRRWQWHEACVRATESPSTFTVSELHELVSQGRRLGYKCAVGDAVAALYDRAAAWTARVRPVLASRVDVDVLTQLLEEVEHIGVHTDEVDRLRDIVRKERDWSDRARTMLAATAPVDAIEALLVRARALPCIPMQETAAHTAVTECREWAVRADAIFFRRRAKDDGIRQVQSLVDALRLVDADAVRKRRDHHKAMALQNKYCCGEDSAGVMICCDLCHGWFHMRCVGARKDSRAARERFFCPTCGRTRRPMLDKVERLVEDSMKLKATVREIEAVRRQYEAALAFSGRARAFLATIGDAGPNTDDMTIERLNRLLTEGDSLEVLVPEVQVLVKAIAAAEGVDEDATDGKDDDDVTGDDKTTGVDGRHAASGHVTLHCLCRRPSRDFMIACDRCDEWFHGECVRITANDAETMASFVCPPCGETTRAVVEGPIGGRDCATNGGPRGKAPAEDHPRAAAAAVDGDERVMGRGSNGQPQRPTQPTPPLTPLESVSQLSSAGHAECNIAPVYQPTSTPALASPLSDDVPQSAKRPFIDGGMPASKRLCVDQATSEVEIARVPVGRGRGMRDRDYVPIRPSHAMQGSHSGASRAHFAVDMPAALHAAHVHGHQFQEAETDVYGIPLNARHAMGGPVPADLYTSASYRPEHAHAHAHAHAHAHAQAQAQAQAHAHAQTHMQSPYDASYDAPYESYGHRMHYAPRDPYLQHHSVHQPVHHAQYGQQRGYIPHPPNPHRFLHAPSSYVHVPRPYSGQHF* # ORIGINAL: g9187.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 56122 58004 . + . ID=g9187;Name=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 56122 58004 . + . ID=g9187.t1;Parent=g9187;Name=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 56122 56177 . + . ID=g9187.t1.exon1;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 56122 56177 . + 0 ID=cds.g9187.t1;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 56277 57098 . + . ID=g9187.t1.exon2;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 56277 57098 . + 1 ID=cds.g9187.t1;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 57312 57536 . + . ID=g9187.t1.exon3;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 57312 57536 . + 1 ID=cds.g9187.t1;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 57716 58004 . + . ID=g9187.t1.exon4;Parent=g9187.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 57716 58004 . + 1 ID=cds.g9187.t1;Parent=g9187.t1 #PROT g9187.t1 g9187 MQALRRLPTTLSVGRSGLRAATVARGLVGRNAHSSSNGGGSPRPPCTRGYSAALPRTGTGHPASGTHPHPHTHSHATTHSAQLTAGAAHVDVQATDVEGRPWRGSFHHIWLRDHCNCVRCFHPRTLQRTNDTHSIPVGIVPRTLAATTDGLRVTWEPDGHVSLYPWEWLHAHNYSARGAPLESLSGEFGRKRLWGAEVARSAPRFDYADVMGSDEVLMGYLQAIHDTGFAFIDNVPLDKADNERLARRIAYIRETLFGGFWDFSPNLEHGDTAYTTLALRAHTDGTYFNDPPGLQMFHCVQFNGTGGESLLVDGFRVASDVRRKKPALFDYLCKTRIPAHYQDVGVNMRALVPMINVDRASGNVVQIRYNGDDRDVLGCLPFDEVPVFYEALHEFNRALRDTEGEYRFRLHPNTVLIFDNWRVLHGRTAFTGDRRVLGCYINHDDYLSRLRTLREERGIFSEL* # ORIGINAL: g9179.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 24002 28567 . + . ID=g9179;Name=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 24002 28567 . + . ID=g9179.t1;Parent=g9179;Name=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 24002 24074 . + . ID=g9179.t1.exon1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 24002 24074 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 24234 24321 . + . ID=g9179.t1.exon2;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 24234 24321 . + 2 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 24572 24659 . + . ID=g9179.t1.exon3;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 24572 24659 . + 1 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 24835 24929 . + . ID=g9179.t1.exon4;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 24835 24929 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 25112 25250 . + . ID=g9179.t1.exon5;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 25112 25250 . + 1 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 25387 25449 . + . ID=g9179.t1.exon6;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 25387 25449 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 25593 25932 . + . ID=g9179.t1.exon7;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 25593 25932 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 26122 26468 . + . ID=g9179.t1.exon8;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 26122 26468 . + 2 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 26693 26918 . + . ID=g9179.t1.exon9;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 26693 26918 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 27104 27139 . + . ID=g9179.t1.exon10;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 27104 27139 . + 2 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 27257 27366 . + . ID=g9179.t1.exon11;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 27257 27366 . + 2 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 27547 27699 . + . ID=g9179.t1.exon12;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 27547 27699 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 27941 28044 . + . ID=g9179.t1.exon13;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 27941 28044 . + 0 ID=cds.g9179.t1;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 28354 28567 . + . ID=g9179.t1.exon14;Parent=g9179.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 28354 28567 . + 1 ID=cds.g9179.t1;Parent=g9179.t1 #PROT g9179.t1 g9179 MTSSLCTFVVGRRCGRLLAALRCVGQGALLGVPGLTSPAGFARLADEAIEASDRLVEDILSAPTSSAIIDRFDDISNVLCSVADMAEFVRNVHPNPVYVGAARDACMRLLPYFETLNTHVGLHAALSRLVDDPAKFGSLSEEGKRAGMLFMHDFEQSGITTPEAQRRGFVALSEQAVEYGMKFAGAQRSPRRIEVNPADLVSMDENHFGAVAHALSKNTDGRIFMQCDDIATHAVLSRAPSGSLRESVYRATHARDPAQLHLLESLLQTRRKLAAVSGFPSYAHKALRGTMAGHPDRVAEFLEKLSLRLRPFADAEVAAFARDKMTVEGDGAGPIRAWDRVFYEERGRVAAMRGVDERSLSLAMHFPLPAVIRGLGDLLGRLYSVRMVPQAIAEGEVWADGVTKYAVVNMENGALIGHLYLDLVERHGKIGTASHHTIRGARQSNGRRQTCIVAVVCSFRAGSGGAIVLGMSALETLLHEMGHAMHTMLGTTKYQHVAGTRCSFDFVETPSVLMEAFASDPRILDMMRQSDGRDHVVRKEHVQALRRMGRVGAALDLQWQVVMAMADQRFYGLAHEHPEVTFADVVRAHSSIPLADGTAPFLHFGHVFGYGASYYSYSWSRALATLIWRRLFAADPTSNAAGLRFRKDVLCHGGARDPWAMIGDVLGTRPSVDDYVDVLVDSISPDSDCNR* # PASA_UPDATE: g9188.t1, single gene model update, valid-1, status:[pasa:asmbl_3978,status:3], valid-1 NODE_22_length_62138_cov_42.6759 . gene 58146 61229 . - . ID=g9188;Name=g9188.t1 NODE_22_length_62138_cov_42.6759 . mRNA 58146 61229 . - . ID=g9188.t1;Parent=g9188;Name=g9188.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 61124 61229 . - . ID=g9188.t1.utr5p1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 61007 61229 . - . ID=g9188.t1.exon1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 61007 61123 . - 0 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 60809 60876 . - . ID=g9188.t1.exon2;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 60809 60876 . - 0 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 60596 60693 . - . ID=g9188.t1.exon3;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 60596 60693 . - 1 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 60237 60461 . - . ID=g9188.t1.exon4;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 60237 60461 . - 2 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 59783 59891 . - . ID=g9188.t1.exon5;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 59783 59891 . - 2 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 59520 59651 . - . ID=g9188.t1.exon6;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 59520 59651 . - 1 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 59292 59391 . - . ID=g9188.t1.exon7;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 59292 59391 . - 1 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 58856 59027 . - . ID=g9188.t1.exon8;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 58856 59027 . - 0 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 58622 58766 . - . ID=g9188.t1.exon9;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 58622 58766 . - 2 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . exon 58146 58494 . - . ID=g9188.t1.exon10;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . CDS 58296 58494 . - 1 ID=cds.g9188.t1;Parent=g9188.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 58146 58295 . - . ID=g9188.t1.utr3p1;Parent=g9188.t1 #PROT g9188.t1 g9188 MAAYESLPKLADGEYDVIVLGTGLKECILSGLLSVSGRKVLHMDRNDYYGGESASITPLEKLYTLFKKPGKPDAKFGSGRDWNVDLIPKLIMANGLLVKMLIITDVTRYLEFKSVEGSYVFKAGKLHKVPVTEKEALSSSLMGIFEKRRFRSFLMWAHDFDPKNPSTWQGHDPYRTKMQEVFDKFGLDRNTADFTGHAIALYKDDDYLNMPCIETINRVKLYSESLARYGNSPYIYPLYGLGELPQGFARLSAIYGGTYMLNKPVEEVVFDNGIAVGVKSEGEFAKAKVIIGDPSYFPDRVKKIGQVIRCICILSHPIANTNDSLSCQVIIPQNQVNRKNDIYISLVSYTHSVAAKGKYIALVSTNVETSVPENEIKPGLDLLGVIDEKFVKVYDMYEPIDDGTKNKVFISSSYDPTTHFETTCLDIMEVYQRVTGEPLNLDKVQKHVETVEAQ* # PASA_UPDATE: g9181.t1, single gene model update, valid-1, status:[pasa:asmbl_3975,status:12],[pasa:asmbl_3976,status:12],[pasa:asmbl_3984,status:12], valid-1 NODE_22_length_62138_cov_42.6759 . gene 31686 41298 . - . ID=g9181;Name=g9181.t1 NODE_22_length_62138_cov_42.6759 . mRNA 31686 41298 . - . ID=g9181.t1;Parent=g9181;Name=g9181.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 40872 41298 . - . ID=g9181.t1.utr5p1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 40758 41298 . - . ID=g9181.t1.exon1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 40758 40871 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 40510 40570 . - . ID=g9181.t1.exon2;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 40510 40570 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 40040 40167 . - . ID=g9181.t1.exon3;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 40040 40167 . - 2 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 39621 39752 . - . ID=g9181.t1.exon4;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 39621 39752 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 39319 39451 . - . ID=g9181.t1.exon5;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 39319 39451 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 39058 39179 . - . ID=g9181.t1.exon6;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 39058 39179 . - 2 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 38656 38781 . - . ID=g9181.t1.exon7;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 38656 38781 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 38201 38398 . - . ID=g9181.t1.exon8;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 38201 38398 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 37753 37877 . - . ID=g9181.t1.exon9;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 37753 37877 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 37455 37637 . - . ID=g9181.t1.exon10;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 37455 37637 . - 1 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 37088 37292 . - . ID=g9181.t1.exon11;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 37088 37292 . - 1 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 36646 36960 . - . ID=g9181.t1.exon12;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 36646 36960 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 33992 36280 . - . ID=g9181.t1.exon13;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 33992 36280 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 33704 33827 . - . ID=g9181.t1.exon14;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 33704 33827 . - 0 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 33427 33505 . - . ID=g9181.t1.exon15;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 33427 33505 . - 2 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 33001 33299 . - . ID=g9181.t1.exon16;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 33001 33299 . - 1 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 32512 32626 . - . ID=g9181.t1.exon17;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 32512 32626 . - 2 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 32190 32281 . - . ID=g9181.t1.exon18;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 32190 32281 . - 1 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . exon 31686 32024 . - . ID=g9181.t1.exon19;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . CDS 31834 32024 . - 2 ID=cds.g9181.t1;Parent=g9181.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 31686 31833 . - . ID=g9181.t1.utr3p1;Parent=g9181.t1 #PROT g9181.t1 g9181 MAPGSGNPALARQLIESMQGDLRLLSAEAKKKHPMVKEVAERTLLQLRQIESAANVPEALTRGSEDILRPFILGCDSKNPRLVQLSVHCIQRLISHNAVSQAAVEPILLALWSLMEQGTEEVKILQCILSMLTSSDLLHAELMSKAIVLCFRLYFGKESLTSATAAATLRQVVTVIFDRVVTEDAEIEDERQLTGSRQSVVDSKSPRPPRHRKSPKNLQPYAADAYLLFQDLCHLTNGDAPYWLVGIVEMSRTFGLELLESALVSHPEVFLKHPEFSFLLKERVCPLVIRLFSPVSKNQLQHGQPQSQQPPAERTSFSVSVRLLRMVCALVKKFYTLLVTESEIFLSMLIKFLDPDKPAWQRSLALEVFRDFFGHPELIRSICQYYDMQKHSTKVFRDMISALGGLSQSIINAQQQLMQSAASQPVIPVVPTHPTPQKRVYLDCLDKADPPTTSDAYALSVALACLLDLVASLSTLVLYRPTDEHDESGLDGAVTRTTKRTPAELIDSKDRPVWRELIDSSWLGVLSALSQLLRVATDEATIQAVLKALQTYINLAGVLDMGQPRDAYVGAICKGAMPTPSLAPALATDARADAIFPPYDLAWYGSIGNISCMKCLMNVAHCLGPILCDAWYPVLEVLLRLDTALGLHQLDKTAASSRRGPQEPRNTLHRSSSNPSLNVVAAVPAVDLSMLSSMLSRLFESSQFLPDAALRDLLGALCRLSGDEADRAGTAAPQQQQQQQQQHENSRGESKSNRSSRVFSFRQEQLFALSKIKEIGVANIARADVFWEFAIAHLLEVAASLSPNARECAVAAMVDLIEAGLSWCLGESDSQRPGESSLPAPPLRTPGSADGERLVALVMYPLRQLSRVVHTDAREKQLECLYHVLQTAGQSLGTAWPAVFEIIGTTVVPPTTNALEDTGAVDASLVRLAFQGLQLVIADFLATLPVTCLATCVDAVTRFGLQRADMNISLTAIGLLWNVSDFLSQNRVSVSDALARHAATQPPATDRPTLDGLWLAVFAGLAELCVDPRPEVRKSASQTLFSTVQAHGALLQPSTWHACMWRILFPLLDNIKAASTLASNQDTPSIIGGGGDGRGIIVHHSRNTAAKQWDETRVLSLAGVARVFAGYQRSVASGARKGHADAELTRAWALLLEFVEGAALSDSREVALAAVDALKDLLRPPSSGADQPSLVADAAAAAVATEMSAVAWRAWERIGTLSTEKATSGHVTDAVVPQDFLASLAEAFVLLHRRMRGEFGDGETRRALRVIRRIAACPTGDRVNAESDMVSKPQAAVLAALAGLDPRDDGAWPLVLGELLWFASLASDKAARHQMPAVAARPPGDFVPFAKRSLKTAAQLYSAHARTASVVQGRVFELFLKTLQVPLALKYACPSQSLWRLSLDTLRSIIPPGIAALKKPGADLLSKEDLALAWKALASVFSDFLFTKSLPADKYSALELQADEQLDVRLVQDIASTIFPLASDMPPGTSVVFVDLLRRGSMHVAAADDAHAFGPEPVRPLREDFARACFDGLLRFSFEDAKGLQRPDGASLTVSKTAVRVLLERCKDVLGSYVHDEELAGQCPLPRTRMAEVYHVLRATSSLVDTLISDAKNGGENDGDLGVRSRTDSGPRGARERALVMELYPNLVACVTCGDAEMRVLLRDVLSRIGELLAIGTSLL* # ORIGINAL: g9183.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 43514 44545 . + . ID=g9183;Name=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 43514 44545 . + . ID=g9183.t1;Parent=g9183;Name=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 43514 43608 . + . ID=g9183.t1.exon1;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 43514 43608 . + 0 ID=cds.g9183.t1;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 43730 43905 . + . ID=g9183.t1.exon2;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 43730 43905 . + 1 ID=cds.g9183.t1;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 44001 44141 . + . ID=g9183.t1.exon3;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 44001 44141 . + 2 ID=cds.g9183.t1;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 44277 44333 . + . ID=g9183.t1.exon4;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 44277 44333 . + 2 ID=cds.g9183.t1;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 44430 44545 . + . ID=g9183.t1.exon5;Parent=g9183.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 44430 44545 . + 2 ID=cds.g9183.t1;Parent=g9183.t1 #PROT g9183.t1 g9183 MDIVEAALLALHRGELAEQQLVDVVRGVGATSPSTLQLVQRLGRGSQDLSHPNASVPAPSVQARTHQLRRQVPAALELLLEKAEERLTRQEYISARLMLSWLRENEAAHPLLNVVSSRLDNTNAVDTLPETCVVCRKDVPCAPLLESATCVRGHSTPRCGVTFQAASEDAVDYSCGCCKQKASFSVAFPGNWQY* # ORIGINAL: g9182.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 41646 43184 . + . ID=g9182;Name=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 41646 43184 . + . ID=g9182.t1;Parent=g9182;Name=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 41646 41801 . + . ID=g9182.t1.exon1;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 41646 41801 . + 0 ID=cds.g9182.t1;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 41940 42524 . + . ID=g9182.t1.exon2;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 41940 42524 . + 0 ID=cds.g9182.t1;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 42741 42882 . + . ID=g9182.t1.exon3;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 42741 42882 . + 0 ID=cds.g9182.t1;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 42982 43184 . + . ID=g9182.t1.exon4;Parent=g9182.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 42982 43184 . + 2 ID=cds.g9182.t1;Parent=g9182.t1 #PROT g9182.t1 g9182 MLQAAARDAGGGLLKKASTFLATYRAECGVDALLWSADHRLALVTAAGVVVYTFVSGEPGMCGLKEAQTVMLRPGTHGPFRAAAWGPIVAHGGPTCALATLAATGQVALWVPRDSGAAAAVVLEAAAHGAPRARCITWLPAAAGARAHLVVGMSDGSLYVVSVGIPSRGGPLIVAQQDAHQCATAALTAVAWGTAVLAAGSEDGSVHILPWQWSPEDVVTSGVTIGVPTVLIASDRIPVSILRWTSQETGSLLIAKGRFLVQATVSASGDDAHVAVVPLVDCAGGTKQFQFDISGVAPCTSGVVVACSVDGTVGLNREDEALAGRLRIPKGAAGVISRGAFRGLASSQNHVLVAHIYEYVG* # PASA_UPDATE: g9178.t1, single gene model update, valid-1, status:[pasa:asmbl_3974,status:3], valid-1 NODE_22_length_62138_cov_42.6759 . gene 21490 23743 . - . ID=g9178;Name=g9178.t1 NODE_22_length_62138_cov_42.6759 . mRNA 21490 23743 . - . ID=g9178.t1;Parent=g9178;Name=g9178.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 23626 23743 . - . ID=g9178.t1.utr5p1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 23533 23743 . - . ID=g9178.t1.exon1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 23533 23625 . - 0 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 23162 23305 . - . ID=g9178.t1.exon2;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 23162 23305 . - 0 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 22879 22978 . - . ID=g9178.t1.exon3;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 22879 22978 . - 0 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 22573 22740 . - . ID=g9178.t1.exon4;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 22573 22740 . - 2 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 22187 22259 . - . ID=g9178.t1.exon5;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 22187 22259 . - 2 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . exon 21490 21861 . - . ID=g9178.t1.exon6;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . CDS 21741 21861 . - 1 ID=cds.g9178.t1;Parent=g9178.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 21490 21740 . - . ID=g9178.t1.utr3p1;Parent=g9178.t1 #PROT g9178.t1 g9178 MSIVTLMVTTSLGAMASERRFDKALTVLQVKEKLELITGSTAGYMRLQLHDRKDAVVCTLHDDNAMLGAYPVEDYMRLHVVDTDPHKKRGEFEDLSKIEKYEMEEDQYEKLGDSVRAFKKRNKLGRFADDAVDPDCEGEEDIEGVAVGARCEVTVDASMGKRGTVRYVGKASFKPGYWVGVQYDEPLGKNNGTVEGRKYFECPNNYGAFVRPKFVKVGDYPEEDLGLSDDEM* # PASA_UPDATE: g9186.t1, single gene model update, valid-1, status:[pasa:asmbl_3989,status:3], valid-1 NODE_22_length_62138_cov_42.6759 . gene 54274 55377 . + . ID=g9186;Name=g9186.t1 NODE_22_length_62138_cov_42.6759 . mRNA 54274 55377 . + . ID=g9186.t1;Parent=g9186;Name=g9186.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 54274 54353 . + . ID=g9186.t1.utr5p1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . exon 54274 54395 . + . ID=g9186.t1.exon1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . CDS 54354 54395 . + 0 ID=cds.g9186.t1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . exon 54497 54556 . + . ID=g9186.t1.exon2;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . CDS 54497 54556 . + 0 ID=cds.g9186.t1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . exon 54704 54781 . + . ID=g9186.t1.exon3;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . CDS 54704 54781 . + 0 ID=cds.g9186.t1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . exon 54947 55027 . + . ID=g9186.t1.exon4;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . CDS 54947 55027 . + 0 ID=cds.g9186.t1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . exon 55116 55377 . + . ID=g9186.t1.exon5;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . CDS 55116 55217 . + 0 ID=cds.g9186.t1;Parent=g9186.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 55218 55377 . + . ID=g9186.t1.utr3p1;Parent=g9186.t1 #PROT g9186.t1 g9186 MRLLTHNMLKCHVKGCIKDNFPLRIEVDELVKEEAELNPDFIRHIIGKLDWAALVATAKSLDISVPESLPESPDDEALEGIHNVIIETHLKAGRLVCNGCGRVYPVSNGIPNMLLNEDEV* # ORIGINAL: g9173.t1 original gene structure, not modified by PASA NODE_22_length_62138_cov_42.6759 AUGUSTUS gene 3286 6691 . - . ID=g9173;Name=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS mRNA 3286 6691 . - . ID=g9173.t1;Parent=g9173;Name=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 5877 6691 . - . ID=g9173.t1.exon1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 5877 6691 . - 0 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 5519 5658 . - . ID=g9173.t1.exon2;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 5519 5658 . - 1 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 5261 5367 . - . ID=g9173.t1.exon3;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 5261 5367 . - 2 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 4864 5004 . - . ID=g9173.t1.exon4;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 4864 5004 . - 0 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 4299 4529 . - . ID=g9173.t1.exon5;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 4299 4529 . - 0 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 3907 4086 . - . ID=g9173.t1.exon6;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 3907 4086 . - 0 ID=cds.g9173.t1;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS exon 3286 3606 . - . ID=g9173.t1.exon7;Parent=g9173.t1 NODE_22_length_62138_cov_42.6759 AUGUSTUS CDS 3286 3606 . - 0 ID=cds.g9173.t1;Parent=g9173.t1 #PROT g9173.t1 g9173 MATTAAETAHMAVVEDANKASAGCDVAADDAKADRAGGVTQSMDPPSQPERRLSMRVRNKPLAHSDEAEFRSPKVSPMRVPRIILPRPLPPSAPAVSVPDATAVPHAVVEEMCSPQGAENSWAVPMVGVEMEVQTQPIRGDSSGANAVNAANAVALSAKSPKNARPSPAGKKAKAGAASSGKPQAAVTNGNTDTMHATVVEGNAGGVGGSLTPNSNSKISQAPVVASSEGPAADSERYARLTAEKVKWCRYCGAQATSSWRKGPWGPNTLCNKCGVRYNGLGQKTAVGVNVILNLRAYEKETIDDRRVPLIIEFPGRFSWIPSAFVPPAPGSRKKKSAPSKQKEKKRLQKSHSKSGLESKRRKEAISTVAKKASDGGKKRKITPLNQEKKKKRLAAGLHATDRPPRSKQLPPPRPPPPPPFEIPETASGCARAEGLFRFTYIQKKSFAFPARFPRFLPPEGLRTVAPQRQLAIETGSRSSKAQSALLGDMSRWKRMKERRHTLIIDKSRIHGWGLYTSIDLEKDDIVLEYTGEIVRQSVADKRESIYEAEMGVGTSYLWRIDDDRIVDATRVGNVARLINHSCDPNCFARVVSIDGDKKVAICALRAIRAGEELCYDYKFDIEGDDKKIPCGCGSEKCRGALNG* # PASA_UPDATE: g9184.t1, single gene model update, valid-1, status:[pasa:asmbl_3977,status:12], valid-1 NODE_22_length_62138_cov_42.6759 . gene 44876 46375 . - . ID=g9184;Name=g9184.t1 NODE_22_length_62138_cov_42.6759 . mRNA 44876 46375 . - . ID=g9184.t1;Parent=g9184;Name=g9184.t1 NODE_22_length_62138_cov_42.6759 . five_prime_UTR 46324 46375 . - . ID=g9184.t1.utr5p1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 46228 46375 . - . ID=g9184.t1.exon1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 46228 46323 . - 0 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 45938 46132 . - . ID=g9184.t1.exon2;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 45938 46132 . - 0 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 45704 45823 . - . ID=g9184.t1.exon3;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 45704 45823 . - 0 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 45547 45605 . - . ID=g9184.t1.exon4;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 45547 45605 . - 0 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 45325 45427 . - . ID=g9184.t1.exon5;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 45325 45427 . - 1 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . exon 44876 45081 . - . ID=g9184.t1.exon6;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . CDS 44917 45081 . - 0 ID=cds.g9184.t1;Parent=g9184.t1 NODE_22_length_62138_cov_42.6759 . three_prime_UTR 44876 44916 . - . ID=g9184.t1.utr3p1;Parent=g9184.t1 #PROT g9184.t1 g9184 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRITSPLLETSSIEKVIEIDSHVGCAMSGLTADARTMIDHARVEAQSHWFTYNEKMKIESITQSVCDLALRFGEDLDDGDDVGETMSRPFGVALLIAGFDEKGAQLFHTDPSGTAYQYDAKAIGSGSEGAQTALQDAYHKSMTLREAEKTALTILKQVMEDKLNATNVELASVTKEAGFRVYPREELEAIVSTL* # PASA_UPDATE: g3533.t1, single gene model update, valid-1, status:[pasa:asmbl_1307,status:12], valid-1 NODE_1355_length_11811_cov_38.5497 . gene 9949 11066 . + . ID=g3533;Name=g3533.t1 NODE_1355_length_11811_cov_38.5497 . mRNA 9949 11066 . + . ID=g3533.t1;Parent=g3533;Name=g3533.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 9949 10134 . + . ID=g3533.t1.utr5p1;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 10394 10401 . + . ID=g3533.t1.utr5p2;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . exon 9949 10134 . + . ID=g3533.t1.exon1;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . exon 10394 10669 . + . ID=g3533.t1.exon2;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . CDS 10402 10669 . + 0 ID=cds.g3533.t1;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . exon 10856 11066 . + . ID=g3533.t1.exon3;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . CDS 10856 10872 . + 2 ID=cds.g3533.t1;Parent=g3533.t1 NODE_1355_length_11811_cov_38.5497 . three_prime_UTR 10873 11066 . + . ID=g3533.t1.utr3p1;Parent=g3533.t1 #PROT g3533.t1 g3533 MDPLRQRRAQQPGPQSVGGYLAGRKDASNVQLNLGRLPDRDDERPSLREEFNEVKTFLKEPRFIVFFVFVILVLAFVYFASSKPRKSRFDTPAM* # PASA_UPDATE: g3532.t1, single gene model update, valid-1, status:[pasa:asmbl_1309,status:3], valid-1 NODE_1355_length_11811_cov_38.5497 . gene 7385 9022 . - . ID=g3532;Name=g3532.t1 NODE_1355_length_11811_cov_38.5497 . mRNA 7385 9022 . - . ID=g3532.t1;Parent=g3532;Name=g3532.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 8961 9022 . - . ID=g3532.t1.utr5p1;Parent=g3532.t1 NODE_1355_length_11811_cov_38.5497 . exon 8384 9022 . - . ID=g3532.t1.exon1;Parent=g3532.t1 NODE_1355_length_11811_cov_38.5497 . CDS 8384 8960 . - 0 ID=cds.g3532.t1;Parent=g3532.t1 NODE_1355_length_11811_cov_38.5497 . exon 7385 8155 . - . ID=g3532.t1.exon2;Parent=g3532.t1 NODE_1355_length_11811_cov_38.5497 . CDS 7650 8155 . - 2 ID=cds.g3532.t1;Parent=g3532.t1 NODE_1355_length_11811_cov_38.5497 . three_prime_UTR 7385 7649 . - . ID=g3532.t1.utr3p1;Parent=g3532.t1 #PROT g3532.t1 g3532 MVSILRAVLLGTFGIALALALANPAPIACAASDNDDLPADYQQLSAEDKLTLLWTRITSDRKSETWPSTLSIFKMLFWDMRKVFSDPTDLRPYAPRVAHVVGAYVKARYVPNDSANALAYTGMYVSGAPAILRMSTATEPSPAGDGSIVPAVAVKMLRDGSPSANFAAMYTFDGTPGHNFFDFPVCTHGPRKGGNIGLQVLAWAFDKISTVGATCGGTMRVANASVDGTPVPVDKVNLPYAVILQPNPALKAALDGYVGSEIMKAIYERVNDTMIGQVGYRVLAVTGPNIPGDDKLVHVGDFVIESEMTTSGWGDRRLFFQQQLFDEELALRVDWKEKTTTEFLLEEGLPYKYINYMPPW* # PASA_UPDATE: g3531.t1, single gene model update, valid-1, status:[pasa:asmbl_1308,status:12], valid-1 NODE_1355_length_11811_cov_38.5497 . gene 3266 7131 . - . ID=g3531;Name=g3531.t1 NODE_1355_length_11811_cov_38.5497 . mRNA 3266 7131 . - . ID=g3531.t1;Parent=g3531;Name=g3531.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 7096 7131 . - . ID=g3531.t1.utr5p1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 6904 6919 . - . ID=g3531.t1.utr5p2;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 7096 7131 . - . ID=g3531.t1.exon1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 6877 6919 . - . ID=g3531.t1.exon2;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 6877 6903 . - 0 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 6325 6494 . - . ID=g3531.t1.exon3;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 6325 6494 . - 0 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 5878 5960 . - . ID=g3531.t1.exon4;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 5878 5960 . - 1 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 5366 5602 . - . ID=g3531.t1.exon5;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 5366 5602 . - 2 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 4970 5100 . - . ID=g3531.t1.exon6;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 4970 5100 . - 2 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 4644 4796 . - . ID=g3531.t1.exon7;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 4644 4796 . - 0 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 3895 4260 . - . ID=g3531.t1.exon8;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 3895 4260 . - 0 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . exon 3266 3543 . - . ID=g3531.t1.exon9;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . CDS 3424 3543 . - 0 ID=cds.g3531.t1;Parent=g3531.t1 NODE_1355_length_11811_cov_38.5497 . three_prime_UTR 3266 3423 . - . ID=g3531.t1.utr3p1;Parent=g3531.t1 #PROT g3531.t1 g3531 MSDNLRAAPEPTQATKLPTFEDVSTAAFRIRDIIPRTPCDRSHDGMIRMTGMEIYFKKDFLLQTGSFKERGARNALKLLTPDQRRVGVIAASAGNHALALAYHGQTLNVPVTVVMPQNAPLMKVSKCREFGAEVILFGEHILQCKDHAMTLVESRGLTYVNGYDHPNIIAGQGTMGLEIMEQLEDFDAIVVPVGGGGLLAGIALAVKTLRPEVKVIGVEPERCASLTAAMKAGKPVTIDAQSTLADGLAVPCVGSNAFEICRTRVDQIVTVSEKYIALAVLHLVELEKAVVEGGGATGLAACIAGLLPELRGKRVIVPLCGGNIDTTVLGRVIERGMAADGRLCRFVVTVSDRPGGIARLTGILASIGVSLKDIFHERAWLESDVFSVQVKCVVETRDAEHAEVLRQRLQDEGYMVYWGALHSVGRLL* # ORIGINAL: g3530.t1 original gene structure, not modified by PASA NODE_1355_length_11811_cov_38.5497 . gene 2 3286 . + . ID=g3530;Name=g3530.t1 NODE_1355_length_11811_cov_38.5497 . mRNA 2 3286 . + . ID=g3530.t1;Parent=g3530;Name=g3530.t1 NODE_1355_length_11811_cov_38.5497 . five_prime_UTR 2 2 . + . ID=g3530.t1.utr5p1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . exon 2 48 . + . ID=g3530.t1.exon1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . CDS 3 48 . + 0 ID=cds.g3530.t1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . exon 273 325 . + . ID=g3530.t1.exon2;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . CDS 273 325 . + 1 ID=cds.g3530.t1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . exon 659 2612 . + . ID=g3530.t1.exon3;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . CDS 659 2612 . + 0 ID=cds.g3530.t1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . exon 2699 3286 . + . ID=g3530.t1.exon4;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . CDS 2699 3018 . + 1 ID=cds.g3530.t1;Parent=g3530.t1 NODE_1355_length_11811_cov_38.5497 . three_prime_UTR 3019 3286 . + . ID=g3530.t1.utr3p1;Parent=g3530.t1 #PROT g3530.t1 g3530 ERVVHRLQACETLLKAVHSKLEPSCLPLEESEEFKIGKTTDIVNPLYGLLLFVEEYENKLECDAVRSARLLALDEQEEGGASFRLKWESGSGNKGIFSFVHAESGQLFESKGISCPWLMCTVADEDERALIAFDDAKFQSRSSVKDDKSLLVAVTATWDETGTAAPDAHARRRVIVVFPEGEAMRKWTDTDATYILSRRHVSTTIQIVSEAFHAQDRRMRASATTSLLVRLGTGAGKWGTHSGMADWRDAARHAQPPQHPEALRMIFGPPGSGKTDTVVRVLASILAAARDRGVKCGVVITCATKEAIAGLLRRLADKLRELQALSFIKLVTADTDRSPGADVTSATVRDIAAEVCGADIFVLGATPYKLNRIANEPNFRSSVEIKTTSGHVVTATRRAKWLGALHITRGPSDPIERLAVTTAEMRSDMVEWARRHGCDTKALQKFFDLDYRPLADILVVDEGTQLRTSVAALAFPLLNDTTGTLFVLGDPKQLGAIFKGTYAASGAGNAASSVFSFLTSGHNAGVGSEDRIVEHLKKNYRMNSDLARFTTTIYPDYVRADQIEKPLNFARMHDGYDCVFANGKSIVTIFVKKGSAADQADQAQAEFAAGIVDAWERRSVAEGDVRRSSIMLGTPHNKQRRDVLRGLETMGRRTRARNDSSNTGGSSGGSADAPESGSHSAGAGTDSVQGKEAACFVALLAHDTSNGSWRFTLEHSRVVVLLTRARERLVIVLTEAMLEPPVDCFIEKGTADGLALLRRAVRMSLQLRHVESAGHDGPIFEEMRWRGISQ* # ORIGINAL: g6137.t1 original gene structure, not modified by PASA NODE_1700_length_9627_cov_45.9625 AUGUSTUS gene 1935 7494 . - . ID=g6137;Name=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS mRNA 1935 7494 . - . ID=g6137.t1;Parent=g6137;Name=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 6877 7494 . - . ID=g6137.t1.exon1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 6877 7494 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 6290 6506 . - . ID=g6137.t1.exon2;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 6290 6506 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 5726 5997 . - . ID=g6137.t1.exon3;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 5726 5997 . - 2 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 5397 5525 . - . ID=g6137.t1.exon4;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 5397 5525 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 5055 5165 . - . ID=g6137.t1.exon5;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 5055 5165 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 4754 4872 . - . ID=g6137.t1.exon6;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 4754 4872 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 4445 4589 . - . ID=g6137.t1.exon7;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 4445 4589 . - 1 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 3701 3859 . - . ID=g6137.t1.exon8;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 3701 3859 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 3109 3541 . - . ID=g6137.t1.exon9;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 3109 3541 . - 0 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 2436 2793 . - . ID=g6137.t1.exon10;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 2436 2793 . - 2 ID=cds.g6137.t1;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 1935 2214 . - . ID=g6137.t1.exon11;Parent=g6137.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 1935 2214 . - 1 ID=cds.g6137.t1;Parent=g6137.t1 #PROT g6137.t1 g6137 MEDVPADAARQRPSEVSIQLLEAPTSADSIGNGAADAVTPVTPSARSRGDTRARIVGDSPTASPASRPRTASTKFADADSQVDSDGETAGKFGSVRRRRLSRAGTFTGWGKSNTPENQAHSRIVTTLKTLQDIWSQKVAEATLERSYDVMKTLLTEILSLDKLVPAFMVAGIILQVRALVESFRKRYQQRCFGHPEVLACIGDLQKALQELNTVMTSGERRNTGDEESSPGPRARKSILYESSPGPRARKSILYESNPVSARARKSISYETNSFAALQFLDGRTCGEVLLEIEELLLQDMLDTSADMELAFRSMRFNVMVEDKKAIKNSKRFVDKLRPPKMKKTILNGVSGYVEAGTVLAIMGPSGCGKTTLLDILAGRKTSGDLAGDIFINNEPRAHYGAMFARIAGYVTQDDVMPECLTVREALMYTAELRMPQALSMERKMERVQEVIMELNLARCADNKIGGKMIRGISGGERRRVSIGMELLTSPSLLFLDEPTSGLSSTDALNIMATMGELARQRRAVITTIHQPRSNIFMMFDRLLLLVNGSTVYFGKASGVLPYLSNLNIQCPPGYNVADFLLDIVTVNPNSGSRRTTSALEGIFEPTDESVRDLLTSFGASAENKSLDDHFLLTDKNQHTSGMETDGSKAVTARLGGVYATDFFWQLRVLMRRQFFLTVRNPLIFAAGIINSLVFGLITGSLWSSLKAYPEESKAVALYYIPVFLGLFTFLAAPAFIEERLLFNRERASGAYRTSAYLFGRVFNEAPQYALNSFLFGIICYYMIGITENFGFYMLVLIIFTNVGIAFVGLAAAIAPNVELAIVGAASFNTFSLLFAGFFVTYQNLPKFWRFAYWISYMQYGFLGLLKAEFKGAEDQSVILTNSTMRALLSSDALTAVALEQTKYTILQNYGMLDRSEWETVGVLIGFLFAFRACTYVALEYMNKERR* # ORIGINAL: g6138.t1 original gene structure, not modified by PASA NODE_1700_length_9627_cov_45.9625 AUGUSTUS gene 8781 9523 . + . ID=g6138;Name=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS mRNA 8781 9523 . + . ID=g6138.t1;Parent=g6138;Name=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 8781 8898 . + . ID=g6138.t1.exon1;Parent=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 8781 8898 . + 0 ID=cds.g6138.t1;Parent=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 9205 9387 . + . ID=g6138.t1.exon2;Parent=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 9205 9387 . + 2 ID=cds.g6138.t1;Parent=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 9501 9523 . + . ID=g6138.t1.exon3;Parent=g6138.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 9501 9523 . + 2 ID=cds.g6138.t1;Parent=g6138.t1 #PROT g6138.t1 g6138 MKMARARMPIAQCLLLSAWLMCAVVSPSARAAVTQCFECNVLSTPQLAFDCCKTANKANVYPCYWNAPDLSNAAFAAAQGYDSAVFADACQTFSAPWDESSGGIIYK* # ORIGINAL: g6136.t1 original gene structure, not modified by PASA NODE_1700_length_9627_cov_45.9625 AUGUSTUS gene 1 1131 . - . ID=g6136;Name=g6136.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS mRNA 1 1131 . - . ID=g6136.t1;Parent=g6136;Name=g6136.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS exon 1 1131 . - . ID=g6136.t1.exon1;Parent=g6136.t1 NODE_1700_length_9627_cov_45.9625 AUGUSTUS CDS 1 1131 . - 0 ID=cds.g6136.t1;Parent=g6136.t1 #PROT g6136.t1 g6136 MRRVWGTRRMVALGILTAALFVVVVHAALQVVLLGRETLEGLVRLPRNEDVDALGGRRSFDTARLGELSARVSRDADARHWRVKGIRLVTGDINFDGATQLKANADEDSTKRDVSWRDGRTRVTSSSGEGVVHVTPVLPMIVMRGAALLGNERTYADGTYPLPRATPVAMGVHTAGLSLTRGTVATLSAPVHVEPTPFESIETSLEPPQGVCDAGFVPVPQHSESTDEGHSSGMTDDVSRHSRGKQSTKAASQRERDRSVGQKPVITAGKWVCVPCPQDHFSLPSLPICTPLLGCDEMARKIRTVHVMRDIGSIKTTHVAVLRMGDGREHPVMYATSKSTDDGRTTAPVMLTSIKRLRQVVPLDVDVCERGGGEEGR # PASA_UPDATE: g11677.t1, single gene model update, valid-1, status:[pasa:asmbl_2145,status:12], valid-1 NODE_1613_length_10184_cov_40.4717 . gene 241 1680 . - . ID=g11677;Name=g11677.t1 NODE_1613_length_10184_cov_40.4717 . mRNA 241 1680 . - . ID=g11677.t1;Parent=g11677;Name=g11677.t1 NODE_1613_length_10184_cov_40.4717 . five_prime_UTR 1590 1680 . - . ID=g11677.t1.utr5p1;Parent=g11677.t1 NODE_1613_length_10184_cov_40.4717 . exon 734 1680 . - . ID=g11677.t1.exon1;Parent=g11677.t1 NODE_1613_length_10184_cov_40.4717 . CDS 734 1589 . - 0 ID=cds.g11677.t1;Parent=g11677.t1 NODE_1613_length_10184_cov_40.4717 . exon 241 352 . - . ID=g11677.t1.exon2;Parent=g11677.t1 NODE_1613_length_10184_cov_40.4717 . CDS 241 352 . - 2 ID=cds.g11677.t1;Parent=g11677.t1;3_prime_partial=true #PROT g11677.t1 g11677 MASAQSTAPIEREILPTTVTPSKYALQLHVHLDRFEFDGTVEITAQVHAATHDIIVHAVDLDLKSAVVHAQVLKNATEISAESINVDKASERAVLHFPHEIAPGSIMLRVHFSGKLSDALVGFYRSRYTVKVDGKDEERHLATTQFEATDARRCFPCWDEPAVKAVFEVELVIPNALTALSNMPVVDEGAFDAGRKIVKFAPTPVMSTYLLAFAVGEFEYIESKTKEGVLIRSYTTPGKKEQGQFALDVAVDSLSYFGEYFDSHYPLPKLDMIAIPDFAAGAMENWGLVTYREISILADPVNTSVSTKQNIAITVAHELAHQ # PASA_UPDATE: g11678.t1, single gene model update, valid-1, status:[pasa:asmbl_2143,status:3], valid-1 NODE_1613_length_10184_cov_40.4717 . gene 2472 6781 . + . ID=g11678;Name=g11678.t1 NODE_1613_length_10184_cov_40.4717 . mRNA 2472 6781 . + . ID=g11678.t1;Parent=g11678;Name=g11678.t1 NODE_1613_length_10184_cov_40.4717 . five_prime_UTR 2472 2598 . + . ID=g11678.t1.utr5p1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 2472 2820 . + . ID=g11678.t1.exon1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 2599 2820 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 2967 3012 . + . ID=g11678.t1.exon2;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 2967 3012 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 3152 3257 . + . ID=g11678.t1.exon3;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 3152 3257 . + 2 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 3441 3553 . + . ID=g11678.t1.exon4;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 3441 3553 . + 1 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 3678 3744 . + . ID=g11678.t1.exon5;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 3678 3744 . + 2 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 3895 3991 . + . ID=g11678.t1.exon6;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 3895 3991 . + 1 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 4162 4539 . + . ID=g11678.t1.exon7;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 4162 4539 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 4667 4747 . + . ID=g11678.t1.exon8;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 4667 4747 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 4872 4981 . + . ID=g11678.t1.exon9;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 4872 4981 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 5121 5139 . + . ID=g11678.t1.exon10;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 5121 5139 . + 1 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 5316 5405 . + . ID=g11678.t1.exon11;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 5316 5405 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 5586 5711 . + . ID=g11678.t1.exon12;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 5586 5711 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 5894 5965 . + . ID=g11678.t1.exon13;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 5894 5965 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 6143 6212 . + . ID=g11678.t1.exon14;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 6143 6212 . + 0 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . exon 6369 6781 . + . ID=g11678.t1.exon15;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . CDS 6369 6535 . + 2 ID=cds.g11678.t1;Parent=g11678.t1 NODE_1613_length_10184_cov_40.4717 . three_prime_UTR 6536 6781 . + . ID=g11678.t1.utr3p1;Parent=g11678.t1 #PROT g11678.t1 g11678 MPAPKDKRGKKAAAATAKSAKADAAVVATNKMAELALSARHVTGVLASRPASRDVIIESFNLSFHGQELIADATIELNFGRRYGLLGHNGSGKSTFLKCLAGREVPIPENIDIFLLNEEMAPSDRTALQAVIDTVAAEVHRLEAEETRLMEEEGPESQALQDVYERLELLDPATFEKRAGELLYGLGFSQEMMAKKTRDMSGGWRMRVALARALFIKPTLLLLDEPTNHLDLSACVWLEDYLSTYDRILVLVSHSQDFLNGVCTNIMHLAKKKLTYYTGNYDMYVKTRAENEVNQMKQYKKQQEDMAHLKEFISSCGTYSNLVRQAKSKQKILDKMEEAGLVEKVEKDFLFKLTFPSCGELAPPILAFNKVGFAYSGSMKDSLYADLELGVDLQSRIAIVGANGFGKSTLLKLMLGELAPTSGVINRHMHLSIGRYNQHSNDQLDPEMSALEFIRAQFPDKNQDIEIWRQQIGRYGVTGTAQTSKIKALSDGQKSRIVFALIALKAPHMLLLDEPTNHLDMESIDSLADAINRFDGGLVLVSHDFRLINQVAKEIWVCENKKIRRWDGTIAEYKNYLRKHQKMEATN* # PASA_UPDATE: g11679.t1, single gene model update, valid-1, status:[pasa:asmbl_2144,status:12],[pasa:asmbl_2146,status:12], valid-1 NODE_1613_length_10184_cov_40.4717 . gene 7691 10104 . + . ID=g11679;Name=g11679.t1 NODE_1613_length_10184_cov_40.4717 . mRNA 7691 10104 . + . ID=g11679.t1;Parent=g11679;Name=g11679.t1 NODE_1613_length_10184_cov_40.4717 . five_prime_UTR 7691 8042 . + . ID=g11679.t1.utr5p1;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . exon 7691 8479 . + . ID=g11679.t1.exon1;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . CDS 8043 8479 . + 0 ID=cds.g11679.t1;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . exon 8675 9218 . + . ID=g11679.t1.exon2;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . CDS 8675 9218 . + 1 ID=cds.g11679.t1;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . exon 9507 9620 . + . ID=g11679.t1.exon3;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . CDS 9507 9620 . + 0 ID=cds.g11679.t1;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . exon 9862 10104 . + . ID=g11679.t1.exon4;Parent=g11679.t1 NODE_1613_length_10184_cov_40.4717 . CDS 9862 10104 . + 0 ID=cds.g11679.t1;Parent=g11679.t1 #PROT g11679.t1 g11679 MPVVAMQPVAAQGQMQHHPQQQQQQQQGQQQQNQYPPSGAQQGQGGPRPMMSAMPQPIKGEGYTPGQLAVMQQQQQQHMMTPTHMGHPHMHPHHHSHMPIPGVAYASPARQPIGGHHAAAAAAAAAAAAAAAAQNPATRAPFVTEWLMANYESGEGVSMPRSSLYEHYSQFCMQSSLEPMNAASFGKLLRSIFPNLKTRRLGTRGNSKYHYYGVRLKATSQLRINPSPGGDEAGGMSDEGSGDESDTPSNHAPQPISTGGAPALADLQRPQSALGVNGKVQLPEFPKPDASSLPPGITAEQTQTFLLMYRAHCQRVLDTVYRTHFNEVEGLLAYFWHGIPQHFKELLACNEIIELIAECDNILYEMTLTILLPNVLQPMPVSLTQAIRNFAKYLESWLVKALADVPPALLKRKLDGALGFVAVITLVRAEIYVWHPQSNTCVGRA* # ORIGINAL: g10743.t1 original gene structure, not modified by PASA NODE_2069_length_7858_cov_40.4245 AUGUSTUS gene 2415 3131 . + . ID=g10743;Name=g10743.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS mRNA 2415 3131 . + . ID=g10743.t1;Parent=g10743;Name=g10743.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 2415 3131 . + . ID=g10743.t1.exon1;Parent=g10743.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 2415 3131 . + 0 ID=cds.g10743.t1;Parent=g10743.t1 #PROT g10743.t1 g10743 MLTVSRRALSSLKWAATTHPLKFNSVTTSVLFFAADATCQKLERDAGKGPEAWDASRSAKAALIGCFVSGPLDVLRLRTMEKISPGQTVKAMVGKIAVGLAFAPIMITSFLSCTHLLNGKTPAEIVPIARHKVPQTFAAAASYWPFVNVFVFYVVPPHSRPVVSGAFGFVWQIFNSFMANRTIDLVEDDEARANTHSAHDAHGDGTAALATALTIATAHGSHVSSSPNADVPAAAHAL* # PASA_UPDATE: g10742.t1, single gene model update, valid-1, status:[pasa:asmbl_3409,status:12], valid-1 NODE_2069_length_7858_cov_40.4245 . gene 143 1979 . - . ID=g10742;Name=g10742.t1 NODE_2069_length_7858_cov_40.4245 . mRNA 143 1979 . - . ID=g10742.t1;Parent=g10742;Name=g10742.t1 NODE_2069_length_7858_cov_40.4245 . five_prime_UTR 1956 1979 . - . ID=g10742.t1.utr5p1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 1890 1979 . - . ID=g10742.t1.exon1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 1890 1955 . - 0 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 1632 1778 . - . ID=g10742.t1.exon2;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 1632 1778 . - 0 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 1328 1528 . - . ID=g10742.t1.exon3;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 1328 1528 . - 0 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 1021 1214 . - . ID=g10742.t1.exon4;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 1021 1214 . - 0 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 681 799 . - . ID=g10742.t1.exon5;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 681 799 . - 1 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 367 499 . - . ID=g10742.t1.exon6;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 367 499 . - 2 ID=cds.g10742.t1;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . exon 143 254 . - . ID=g10742.t1.exon7;Parent=g10742.t1 NODE_2069_length_7858_cov_40.4245 . CDS 143 254 . - 1 ID=cds.g10742.t1;Parent=g10742.t1;3_prime_partial=true #PROT g10742.t1 g10742 MGAGESSLRFSNAVGDLCKLTHVIPSSDEKFWEQLWNAGVPLADVFLAMPNSDILSLKCDAPANLRTLIVKLVEKITAMATTGGCRGTLGGPSVADNQRVVQSCVRILTRIVPFLYEDPDWRYIFWTSKYRLSLSDGQDGSQFPYPDDFRTDIDGDDTHRAMMSTLGESLAAALLDLCFCPGFTIPRVRSDELDSLDSREHIWEAGVGMEVAPPSTDAMDEARLDLLRLLLVCMSDVLYFTQAEAKDHASNWLTILASQEHNAHALPLFCSLLNVACSYDPVGYGLPYNHYMFSDNRYPLAEVALQTLVVLLDFGGLNAGVPSQ # ORIGINAL: g10745.t1 original gene structure, not modified by PASA NODE_2069_length_7858_cov_40.4245 AUGUSTUS gene 4917 7781 . + . ID=g10745;Name=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS mRNA 4917 7781 . + . ID=g10745.t1;Parent=g10745;Name=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 4917 4994 . + . ID=g10745.t1.exon1;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 4917 4994 . + 0 ID=cds.g10745.t1;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 5170 5247 . + . ID=g10745.t1.exon2;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 5170 5247 . + 0 ID=cds.g10745.t1;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 5367 6159 . + . ID=g10745.t1.exon3;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 5367 6159 . + 0 ID=cds.g10745.t1;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 6363 6497 . + . ID=g10745.t1.exon4;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 6363 6497 . + 2 ID=cds.g10745.t1;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS exon 6982 7781 . + . ID=g10745.t1.exon5;Parent=g10745.t1 NODE_2069_length_7858_cov_40.4245 AUGUSTUS CDS 6982 7781 . + 2 ID=cds.g10745.t1;Parent=g10745.t1 #PROT g10745.t1 g10745 MLVFQKVFDIETDLLPHWPANPDGAKPPVRIVGQEAGHVLLVAWEGIDDATKMHGLTQTQKTFIDAFDLRTSTRQRLYSHDGVVFIESCTVNRERTAIGFVTISRRAGGSLAAGTHTHTQPHAHMGGLPRTTGSPRGSPSSSTHNLPIGSVVADGDGSRWYEPFLAEVPCGRVYPLRSGSRNYQRVQFLCHPDAPLKQSTNAVLFVHKECVSSYAIQVGIGAQHSRINAGSIRETKLAGKILWFQWDMHRQCAYFMYIRQNTKDQTARLETVLKCLQFGDKGACDAILDVALPVALHRNLSEPAEYLAMPCAHALPDRHFNMEVVHMSGGALAICYQHMRDAADNDDDGPRIEYSIFPLHYGDFILAYVPGLYLHLIDCSAEHEACHDIRFRYPDVPPLPSVVVRPVSSSGSIGAGAPHGLTICTPSHAPDSFLLHAPPGYFELVKQRTATMAYGPALFDSSGGAAYRYTLDSERLLAVVERPSTTEQFRIRGLHLAIAHFQDLPKSGSLAKRLIDRLCRRRPDAVTTAILMEYLVGTTFQSLKRHGVDPAALRLLPTTTVVQCIPGMDHDAIANDGMAWSGALSEWPDCRCVLCLAFASSACLRMQHPSHIELRGRMRGYRNYHVP* # PASA_UPDATE: g10744.t1, single gene model update, valid-1, status:[pasa:asmbl_3410,status:3], valid-1 NODE_2069_length_7858_cov_40.4245 . gene 2931 4439 . - . ID=g10744;Name=g10744.t1 NODE_2069_length_7858_cov_40.4245 . mRNA 2931 4439 . - . ID=g10744.t1;Parent=g10744;Name=g10744.t1 NODE_2069_length_7858_cov_40.4245 . five_prime_UTR 4353 4439 . - . ID=g10744.t1.utr5p1;Parent=g10744.t1 NODE_2069_length_7858_cov_40.4245 . exon 3927 4439 . - . ID=g10744.t1.exon1;Parent=g10744.t1 NODE_2069_length_7858_cov_40.4245 . CDS 3927 4352 . - 0 ID=cds.g10744.t1;Parent=g10744.t1 NODE_2069_length_7858_cov_40.4245 . exon 2931 3805 . - . ID=g10744.t1.exon2;Parent=g10744.t1 NODE_2069_length_7858_cov_40.4245 . CDS 3179 3805 . - 0 ID=cds.g10744.t1;Parent=g10744.t1 NODE_2069_length_7858_cov_40.4245 . three_prime_UTR 2931 3178 . - . ID=g10744.t1.utr3p1;Parent=g10744.t1 #PROT g10744.t1 g10744 MNLFVLHALPRAAAAMHCNKHVPKMIVEAAQLLSNTHHFLGSQWAAGGDGSSVVRLYKQYGSPNMRLAPMIWLQESLSNYRWACEMGLALCDVYTKRYGKRHKSQDVLAWLSAHEPADVLVDKGLTPFRPAVPEQYIVVTGEVIDPIESYRMYYVCEKNYFAKWPEGEVPDWYTAGLTKWAAVMLANRKDAADKSGSKTGKKMKMRRAEDQTSAVAADAGGAFRDVVGAGEHTTVASESKSGVDDRQLRSRGAQLSSEALYLPLRKRRRTSSPGGSTTPTTTSATTPTTAGHPSVVVLHTPHRMDSPGATTNGPKLRRRAAHARRMEDNDTGHASTRASRPRVTREKRAT* # ORIGINAL: g2050.t1 original gene structure, not modified by PASA NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS gene 9000 10070 . - . ID=g2050;Name=g2050.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS mRNA 9000 10070 . - . ID=g2050.t1;Parent=g2050;Name=g2050.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS exon 9000 10070 . - . ID=g2050.t1.exon1;Parent=g2050.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS CDS 9000 10070 . - 0 ID=cds.g2050.t1;Parent=g2050.t1 #PROT g2050.t1 g2050 MFEGCPDVSSCTVYAPRGSGKTTALKAFSPKIDSVLPVYIDFSDRNTRAVQLNKLLCTQISKAVHHPYFTSTTNYASSDISIALEESQKHLLLLVDEFECLLTEDETVDRQRGETARGSIFDLIGFANAPEGRVSTVICSNSMSIMDLIENDWARVDKGNLVARFPLIQSYPSMNDTKFELLQIPYSIPTDLDAVSSDVASLEERRKLAFYGTNSPPARISHFANPQCAGLCKQQRYSGPKQLHSHLRSGAFARAVLRSMRQCNQKLYDRSCPVEQIPWEQFEPMTLEQVRRIHATVSSPTSGANYIHDVRFLVDEGILVGRDHLFYPARFAAPHEHHEHHEHHEHHEHHEHHEHE* # ORIGINAL: g2051.t1 original gene structure, not modified by PASA NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS gene 11723 12121 . - . ID=g2051;Name=g2051.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS mRNA 11723 12121 . - . ID=g2051.t1;Parent=g2051;Name=g2051.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS exon 11723 12121 . - . ID=g2051.t1.exon1;Parent=g2051.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS CDS 11723 12121 . - 0 ID=cds.g2051.t1;Parent=g2051.t1 #PROT g2051.t1 g2051 MCHGNVDGSLDVSSRKTGNKTLRKDAEDIVEGIVARDPSTNFVGIKFIHCYSHVGKTRPPNAQLLDRQLNIHRSSGTSNNVPVTFNVPGSVLGYNNEVYFHTGLRPELLKEDRVVKWIRQQCVSAQNTSFIN* # ORIGINAL: g2048.t1 original gene structure, not modified by PASA NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS gene 5910 7568 . - . ID=g2048;Name=g2048.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS mRNA 5910 7568 . - . ID=g2048.t1;Parent=g2048;Name=g2048.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS exon 6613 7568 . - . ID=g2048.t1.exon1;Parent=g2048.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS CDS 6613 7568 . - 0 ID=cds.g2048.t1;Parent=g2048.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS exon 5910 6315 . - . ID=g2048.t1.exon2;Parent=g2048.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS CDS 5910 6315 . - 1 ID=cds.g2048.t1;Parent=g2048.t1 #PROT g2048.t1 g2048 MSVVIRSVQQTTDAVAATVEILEGGFVEYVAGPGVYQSSVYVEGRPIETEQPTVLKVESAEWTFQNQSAFKYVKVAPSERAKGGIIAVAVFGIVTSVVCMAFVAKYKKVKIVSRASPTFLHMFAFAVVMYNAVIIVEVAGGEGGGCIASEWLEHVAFALFFGSIIAKTYRLSCIFNNKRLDRLGNMSDPAITKRFAVIFVAVITYMVVWTAVRAPTVVTTSVSQSEPTDDGLLNYVTVSYTTTCSMGWWRGAILICEYAVVASLAFLVVRVWSIDPDFNESRYISFVVYNWLIVGGLIELIRNFWNGNETNPNFYYGLRMSDLTIQNIVDDDIRERLTNIFLSFDTAKKGVLRVGDMVDNKSALNKEVESKILKILGASKILGIFDYHGNVTKDEFDKKYRPILLQKIVTKLYEKILDESTEELMHEIKSKCRDCDVCVPPRAEVASLLIPRQ* # ORIGINAL: g2049.t1 original gene structure, not modified by PASA NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS gene 7588 8769 . - . ID=g2049;Name=g2049.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS mRNA 7588 8769 . - . ID=g2049.t1;Parent=g2049;Name=g2049.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS exon 7588 8769 . - . ID=g2049.t1.exon1;Parent=g2049.t1 NODE_1263_length_12581_cov_40.4221_potentialcontaminant AUGUSTUS CDS 7588 8769 . - 0 ID=cds.g2049.t1;Parent=g2049.t1 #PROT g2049.t1 g2049 MLTPDTTLNFFGTTLTGFWGSGIYGKAYTGIWVPEIESALLITGSQCANIPIGMTFNGTHEFHRTFRVTTTDVDVSGNWGPDFVATWNPPIPLCCLSLTAVYSEGSVFLAAVCFTNGLFGNVPLFPVFYRLDVATRVWTVLSSEENLPLYKPGLIAIGKQIYLYGGAFAGGRPASVSDPLNFNKYPQSTLYVYDIELDSWDGLSFDCGSSRIMPTIYRGLYKFGERGRYEPDPVGCNKIEVQELLTPPYWTDGDITYNADSIQTVDCVVPPPLYGHSILSLTDDTLVVFGGITSTYNYPNALYHDSSAYTYNLTSQQWTKRAGSFEYAFGAVATLSDCVIAWPGQQSNKAIALYSSEVLMCDMKTSTFTMEGDVVPPQDTFVLISTGTDLLRV* # PASA_UPDATE: g12481.t1, single gene model update, valid-1, status:[pasa:asmbl_4772,status:12], valid-1 NODE_266_length_28679_cov_42.0821 . gene 18638 21850 . - . ID=g12481;Name=g12481.t1 NODE_266_length_28679_cov_42.0821 . mRNA 18638 21850 . - . ID=g12481.t1;Parent=g12481;Name=g12481.t1 NODE_266_length_28679_cov_42.0821 . five_prime_UTR 21841 21850 . - . ID=g12481.t1.utr5p1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 21600 21850 . - . ID=g12481.t1.exon1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 21600 21840 . - 0 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 21265 21302 . - . ID=g12481.t1.exon2;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 21265 21302 . - 2 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 21049 21081 . - . ID=g12481.t1.exon3;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 21049 21081 . - 0 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 20440 20778 . - . ID=g12481.t1.exon4;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 20440 20778 . - 0 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 20011 20073 . - . ID=g12481.t1.exon5;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 20011 20073 . - 0 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 19399 19673 . - . ID=g12481.t1.exon6;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 19399 19673 . - 0 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . exon 18638 18830 . - . ID=g12481.t1.exon7;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . CDS 18713 18830 . - 1 ID=cds.g12481.t1;Parent=g12481.t1 NODE_266_length_28679_cov_42.0821 . three_prime_UTR 18638 18712 . - . ID=g12481.t1.utr3p1;Parent=g12481.t1 #PROT g12481.t1 g12481 MLPSSLLPAGRHAWFRQLLSVGASSSACHGNPVRGQCVGKVAMQIGISDKRNYSTPALPKPTIVHLRNARTGTDVFVVGTAHVSLISAEEVKEVIRNVKPNTVMLELCNQRALKMQAQSKAKGGFSEDVDMQSVVRYIKTQTDHAQKMGLLPSAGGKTAGVTNPAPSIPALLKGVEMARKLFGGSSGSSDNFDAEQMGKQFYGFAKQLGIYPGMEFKVAMGEAAALKAKLILGDIPIDKTLSDVSSAFQAAAKGFSPASIPAMAKRLMSTGIPPIVKHILSLPANASAEDIKTHMLMTAEIMKNREKVRQLRVFMDEMLPTLAMSAILHKRDEHMSKVLHLIEEKRAVAVVGFAHLDGIEKNWELLNR* # ORIGINAL: g12477.t1 original gene structure, not modified by PASA NODE_266_length_28679_cov_42.0821 AUGUSTUS gene 208 438 . + . ID=g12477;Name=g12477.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS mRNA 208 438 . + . ID=g12477.t1;Parent=g12477;Name=g12477.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS exon 208 438 . + . ID=g12477.t1.exon1;Parent=g12477.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS CDS 208 438 . + 0 ID=cds.g12477.t1;Parent=g12477.t1 #PROT g12477.t1 g12477 LPESVLAAMLSRGNATAAAALKARQAAAAAAAAQAAAASGTAPMSSGAGVQGGNNGGAGSVGGPGAMGHIPFGVQK* # PASA_UPDATE: g12480.t1, single gene model update, valid-1, status:[pasa:asmbl_4767,status:12],[pasa:asmbl_4769,status:12], valid-1 NODE_266_length_28679_cov_42.0821 . gene 15198 18141 . + . ID=g12480;Name=g12480.t1 NODE_266_length_28679_cov_42.0821 . mRNA 15198 18141 . + . ID=g12480.t1;Parent=g12480;Name=g12480.t1 NODE_266_length_28679_cov_42.0821 . exon 15198 15617 . + . ID=g12480.t1.exon1;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . CDS 15198 15617 . + 0 ID=cds.g12480.t1;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . exon 15785 16061 . + . ID=g12480.t1.exon2;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . CDS 15785 16061 . + 0 ID=cds.g12480.t1;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . exon 16302 16343 . + . ID=g12480.t1.exon3;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . CDS 16302 16343 . + 2 ID=cds.g12480.t1;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . exon 16754 18141 . + . ID=g12480.t1.exon4;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . CDS 16754 18114 . + 2 ID=cds.g12480.t1;Parent=g12480.t1 NODE_266_length_28679_cov_42.0821 . three_prime_UTR 18115 18141 . + . ID=g12480.t1.utr3p1;Parent=g12480.t1 #PROT g12480.t1 g12480 MAVRTSPIRGFFRGVERVLRIPLLSYSTDKEVRFHDTTLSLVHKLLFTLATTYMLVEILFRHKYATFEVPAGTVNTWSDFALHVREPLVKPKYCDNSEYDVYPTLASGNFEALNISCRALTSYEVVTLAATSFSANTFVQVKFNGTVENTFVTNVEDVAMNLQHSFSTSFMAQTNLNTKVFDHTGSVVMSTSNGEPLLGITVGQLLRWAGVDLDEHAQAAEGLGVAPFLRLTGVVILVKLEYTNFREWDFADRSPHCRIRFTVQSGLWGYLGPGARYYSPTSMARTETMAVRFLFITEGQLGQFSFYDLLVSILSGTILVSVATAFVNHIGSSWLPLAKRRRFNLAMTEHVILDSDLIDKAPSLIGLGDRIHVGQDGRVTHVGSAVSFAHSRAGSAAALEIGNAIDGRGVGSVDSVMATVVPVFDDDDDYGNYKGGNNGHTNSNSNNYNNNYNNNNYKSISTSDLKSGDHVDHHVVHEDWSGRYPPTKEPVAASGVELGTLRGWNQSGDRTPHERPQQPHPHPQTQTHERPQQPHPHPQTQPQSQRAHNINPSPPPPLMTASFPIEGGAIRIDHSGRVCVEDDSVTGPPAQSLSKVPSMHSGVYGDTGNAKEGIVQQSSSGEGPDPAQDSGFVSAVTSTPPRSDDSKAPSVVSASGADTGRNVAAEAGSTVAVDRRSYALPPLRSSNKVAPLGDHAATP* # PASA_UPDATE: g12479.t1, single gene model update, valid-1, status:[pasa:asmbl_4766,status:12],[pasa:asmbl_4771,status:12], valid-1 NODE_266_length_28679_cov_42.0821 . gene 10509 14468 . - . ID=g12479;Name=g12479.t1 NODE_266_length_28679_cov_42.0821 . mRNA 10509 14468 . - . ID=g12479.t1;Parent=g12479;Name=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 13448 14468 . - . ID=g12479.t1.exon1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 13448 14468 . - 0 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 13149 13312 . - . ID=g12479.t1.exon2;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 13149 13312 . - 2 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 12766 12979 . - . ID=g12479.t1.exon3;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 12766 12979 . - 0 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 12361 12571 . - . ID=g12479.t1.exon4;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 12361 12571 . - 2 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 11822 12056 . - . ID=g12479.t1.exon5;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 11822 12056 . - 1 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . exon 10509 11506 . - . ID=g12479.t1.exon6;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . CDS 10694 11506 . - 0 ID=cds.g12479.t1;Parent=g12479.t1 NODE_266_length_28679_cov_42.0821 . three_prime_UTR 10509 10693 . - . ID=g12479.t1.utr3p1;Parent=g12479.t1 #PROT g12479.t1 g12479 MASFRESGEIRTVPDTLHAFQRLLEEVMGQLDSLRQRMEVIDHPELADEFMRDELVAMDLRKSASVSLKAKDGEKRGKSDGLSDADRARNGSSATLASVDLSPEELEYEAEKVSLARSLLERRMRTEYLRFAKLHELVERLQQLDAVKDALPEELSLSTYETWLNSDAAMFDLRSEILDLETRRVRLLKDAPGAPSSRSNSVSAGVDDQQPVPDKTPDGEFRERLPSGRTRIPSVGKSGLLPTVTLAPPAEGEAAATDSPKARVRQRRFQRIATMLGRGPPKPIYVDEIVQPNSGSFESRKIRTFVSSFIDPSKGGSHPTFQDLVEALAEYVIEEYGPRLALSATKSKDRDALAPAAPTSAEVQERLEQFIIPQILKVAWDRCRDDEGDKAIAEKCHAFARVTQTQMRIMESHQSPETEPFHDACSKLKSLCFPNPPCQRLACILAAAKAVFATVEKFHPGVTTGGDEFMDIWVYVVLKARVNNLSTCISFISQYASPAILQAEHGYYFSALEMAATYIRNLTNESLDEDSGLLADRHCFVVCDRARFLRLSKADRPQYEIVHADVRLDGFALHVAAEWLLDSVRKVTWVLERSEGASAVVSVVRVNKRNASIEQRRAIESVYFNPSLDGVSTFEASLGYVLHANPRAFASTHSVTLLPVPSGDLDSVAVNISRQLTLHRLSCGASPDMWMNSDVSPRSAKSFESTYGFMLKGVASITLDAETWDRVAAFVVRFKALTMHLGLLSMSPEGLDGQYSHALLTAVRSFQEKFNAENSVSQMGGGRSSVAFDMDFDLGSLSLWPPLPVDGRLDRPTLDALADTLTTMRRHLKRLHHVFEGDPLAEWSPFREFLRGIQREWQLPEDGTLGTAMAREVARRVLEFDGLKR* # PASA_UPDATE: g12478.t1, single gene model update, valid-1, status:[pasa:asmbl_4768,status:3], valid-1 NODE_266_length_28679_cov_42.0821 . gene 1638 10351 . + . ID=g12478;Name=g12478.t1 NODE_266_length_28679_cov_42.0821 . mRNA 1638 10351 . + . ID=g12478.t1;Parent=g12478;Name=g12478.t1 NODE_266_length_28679_cov_42.0821 . five_prime_UTR 1638 1768 . + . ID=g12478.t1.utr5p1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . five_prime_UTR 1925 1925 . + . ID=g12478.t1.utr5p2;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 1638 1768 . + . ID=g12478.t1.exon1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 1925 1996 . + . ID=g12478.t1.exon2;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 1926 1996 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 2147 2232 . + . ID=g12478.t1.exon3;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 2147 2232 . + 1 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 2408 2490 . + . ID=g12478.t1.exon4;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 2408 2490 . + 2 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 2774 2908 . + . ID=g12478.t1.exon5;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 2774 2908 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 3231 3337 . + . ID=g12478.t1.exon6;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 3231 3337 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 3596 3686 . + . ID=g12478.t1.exon7;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 3596 3686 . + 1 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 3928 4060 . + . ID=g12478.t1.exon8;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 3928 4060 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 4213 4310 . + . ID=g12478.t1.exon9;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 4213 4310 . + 2 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 4544 4690 . + . ID=g12478.t1.exon10;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 4544 4690 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 4932 4991 . + . ID=g12478.t1.exon11;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 4932 4991 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 5228 5335 . + . ID=g12478.t1.exon12;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 5228 5335 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 5538 5636 . + . ID=g12478.t1.exon13;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 5538 5636 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 5868 5948 . + . ID=g12478.t1.exon14;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 5868 5948 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 6230 6482 . + . ID=g12478.t1.exon15;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 6230 6482 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 6797 7062 . + . ID=g12478.t1.exon16;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 6797 7062 . + 2 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 7325 7438 . + . ID=g12478.t1.exon17;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 7325 7438 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 7602 7823 . + . ID=g12478.t1.exon18;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 7602 7823 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 8039 8102 . + . ID=g12478.t1.exon19;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 8039 8102 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 8284 8415 . + . ID=g12478.t1.exon20;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 8284 8415 . + 2 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 8606 8694 . + . ID=g12478.t1.exon21;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 8606 8694 . + 2 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 8915 9094 . + . ID=g12478.t1.exon22;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 8915 9094 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 9356 9544 . + . ID=g12478.t1.exon23;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 9356 9544 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 9731 9831 . + . ID=g12478.t1.exon24;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 9731 9831 . + 0 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . exon 10091 10351 . + . ID=g12478.t1.exon25;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . CDS 10091 10226 . + 1 ID=cds.g12478.t1;Parent=g12478.t1 NODE_266_length_28679_cov_42.0821 . three_prime_UTR 10227 10351 . + . ID=g12478.t1.utr3p1;Parent=g12478.t1 #PROT g12478.t1 g12478 MTSMEVDGPSSAGSIDEGLYSRQLYVLGHEAMKKMNASDVLISGMGGLGVEIAKDVVLAGVKSVTIHDNAITQIKDLSSQFFLSEADIGKNRASATLPRLAELNSYVPVAAHTGALTDDFLARFKVIVLTDSTLEEQLRVNAFAHPRNIALIVASTRGLFGQLFCDFGKEFVIADTDGEQPATVMVASVSSEPEGVVTCLEESRHNLSTGDYVTFCEIDGMPALNNAAPRPVKVLGPFTFSIGDTTSLGTYVRGGIATQVKMPKTVDFKPLAESLAYPEFVVTDFAKFDHPNQLHVAFQALYKYAAKYQSLPRPYNAEDAQKFLAEADAVNKASASPIELNAKLLSLFAYNATGDIAPMCSTIGSIAAQEVMKACSGKFHPVFQWLYFDSIESLPETELNEDLCRPIGSRYDGQIAVFGRNVQHRLENLKYFLVGAGAIGCELLKNWALMGISAGPNGMIYVTDMDTIEKSNLNRQFLFRPWDVQKLKSETAAAAVKAMNPSIHITAHQNRVGPETESMYNDEFFEYLDGVANALDNVEARKYMDRRCVYYRKPLLESGTLGTKGNTQVVVPFLTESYSSSQDPPEKSIPICTLKNFPNAISHTLQWARDLFEGLFKQSPENVNLYAAGGDYVPLLLKQPASQVVETLDAVREYLVTARPHSYDDCIAWARLRFEDYYNNSIRQLLFNFPADQVTSTGQPFWSGPKRCPKPLAFDPEDATHFDFVFAGANLRAFNYGIPIPGDREYVKRLASAIAVPEFRPREGVKIQVNENEQPSANNDGSRESGDIEDRLKELPSAESLNGFKLSPIEFEKDDDTNFHMDFITAASNLRASNYSIAPADRHQSKLIAGKIIPAIATTTSLVVGLVCLEMYKVIQGHTKIESYKNGFVNLALPFVSFSEPIASPKLKYNDVQWGLWDRFEVQGEMTLEGFINYFKEVHNLEVTMLSCGVSMLYSFFMPKNKLKERLIMPMSQLVETVSKKQVPAWTRALVLEVCCNDTEGEDVEVPYVRYLLR* # ORIGINAL: g12484.t1 original gene structure, not modified by PASA NODE_266_length_28679_cov_42.0821 AUGUSTUS gene 27293 28483 . + . ID=g12484;Name=g12484.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS mRNA 27293 28483 . + . ID=g12484.t1;Parent=g12484;Name=g12484.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS exon 27293 28483 . + . ID=g12484.t1.exon1;Parent=g12484.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS CDS 27293 28483 . + 0 ID=cds.g12484.t1;Parent=g12484.t1 #PROT g12484.t1 g12484 MAAFSSLPIEIVVHHVILYLDNGDILSLCHTNSTLRSHLRGLAIYELRPRSAASYLIVTVFRTTVLSVIRRNRISVCFDSQHHLTDVSALGGVHTPGLMDCIGVTDVSALGGVHKLHLTSCIGVTDVSALGGVHWLDLSGCDYLRNVSALGGVHTLYLFGCNRVVDVSALGNVHRLILGNCYRIVDVSALGKVHSLNLSDCIGVVDVSALGNVHTLDLSHCSKLVDVAALGNVHTLLLGHCHAVVDVSGLGGVHTLFLHGCNGVVDVSSLGRVRKLNLSSCSGLVDVSALGGVHTLHLSGCERVKDVSALGGVHTLNLRNCRDIVDVSALGGVHTLNLSGCDRVKDVSALSCLHTLDLSGCSGVQAVSALIGVHTLNLSDCFGVKDLLALADFDMG* # ORIGINAL: g12483.t1 original gene structure, not modified by PASA NODE_266_length_28679_cov_42.0821 AUGUSTUS gene 24640 26428 . - . ID=g12483;Name=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS mRNA 24640 26428 . - . ID=g12483.t1;Parent=g12483;Name=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS exon 26251 26428 . - . ID=g12483.t1.exon1;Parent=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS CDS 26251 26428 . - 0 ID=cds.g12483.t1;Parent=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS exon 25119 26001 . - . ID=g12483.t1.exon2;Parent=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS CDS 25119 26001 . - 2 ID=cds.g12483.t1;Parent=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS exon 24640 24904 . - . ID=g12483.t1.exon3;Parent=g12483.t1 NODE_266_length_28679_cov_42.0821 AUGUSTUS CDS 24640 24904 . - 1 ID=cds.g12483.t1;Parent=g12483.t1 #PROT g12483.t1 g12483 MAQGRPDASVEAHLWAAHARTFDEEESRLQLIAHQRRAVAGVGARVPGPSAPQSWIRYEGTFGIAPGASPSASSANSPASRDKGGVRIILNGEPVLVHTTAADSFPTLLELCAFVVGTTLVHPVASDDDVINRSRIAKRIKKKAKRKQKKLVMARLEASPCAMELDVAEEAVVASAPAPLPASAEGVMGMEAMLRLERRYAEATLGCLALMPWDVRRTILKYASSVGRIDDSNMHAFALHSGESARAVDLTGCNLSNVGVLVAIGYLRRDADGGYSHTPISHPDKLGKHFTKLKTETADSTWEDIYFGRDCEDAYTTEGNAIVSMPSLRVLDLNLTGCKLVSGGSRFVGDIARSCPSLRKLTLAGCLGELTGPTTVAAIVSGLQTLEVIDLSGCVWLGDAEVRRLRHMPRLRKVIAKGCPLVTSGALLVGASSGEGAMLLQ* # PASA_UPDATE: g12482.t1, single gene model update, valid-1, status:[pasa:asmbl_4770,status:3], valid-1 NODE_266_length_28679_cov_42.0821 . gene 22115 24494 . + . ID=g12482;Name=g12482.t1 NODE_266_length_28679_cov_42.0821 . mRNA 22115 24494 . + . ID=g12482.t1;Parent=g12482;Name=g12482.t1 NODE_266_length_28679_cov_42.0821 . five_prime_UTR 22115 22178 . + . ID=g12482.t1.utr5p1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 22115 22476 . + . ID=g12482.t1.exon1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 22179 22476 . + 0 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 22652 22725 . + . ID=g12482.t1.exon2;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 22652 22725 . + 2 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 22996 23101 . + . ID=g12482.t1.exon3;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 22996 23101 . + 0 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 23325 23445 . + . ID=g12482.t1.exon4;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 23325 23445 . + 2 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 23680 23776 . + . ID=g12482.t1.exon5;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 23680 23776 . + 1 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . exon 24184 24494 . + . ID=g12482.t1.exon6;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . CDS 24184 24438 . + 0 ID=cds.g12482.t1;Parent=g12482.t1 NODE_266_length_28679_cov_42.0821 . three_prime_UTR 24439 24494 . + . ID=g12482.t1.utr3p1;Parent=g12482.t1 #PROT g12482.t1 g12482 MQTLKRVCFATYDGIGDEWNDDGALTEAVAASHGFAVEYVSWTKCAADWASYDLVVIRSTWDYYEPSKCGRFAEWLKSLRDGGVAVANSVDVMLWNMNKVYLRELAESGIGDLPACIWLEKMSEVKVDLKRTLGERGWSEVVVKPTVSAGSDRTNRITLETASEYDEWLRTELQVSDMMVQQYVPSIVEGEISLHFFGGVYSHSVIKRPKAGDFRVQNIHGGKIEAYSPEAKGLSLAQRIVDGTPAKDCLYVRVDLVVRPWTSAASSSSSPPTWDERGYYLMELELIEPMLYLHYDSNAPTAFAKAIQKRLSIARG* # PASA_UPDATE: g11311.t1, single gene model update, valid-1, status:[pasa:asmbl_3752,status:12], valid-1 NODE_2203_length_7291_cov_38.2004 . gene 5170 7256 . - . ID=g11311;Name=g11311.t1 NODE_2203_length_7291_cov_38.2004 . mRNA 5170 7256 . - . ID=g11311.t1;Parent=g11311;Name=g11311.t1 NODE_2203_length_7291_cov_38.2004 . five_prime_UTR 7217 7256 . - . ID=g11311.t1.utr5p1;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . exon 6969 7256 . - . ID=g11311.t1.exon1;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . CDS 6969 7216 . - 0 ID=cds.g11311.t1;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . exon 5597 6831 . - . ID=g11311.t1.exon2;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . CDS 5597 6831 . - 1 ID=cds.g11311.t1;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . exon 5170 5411 . - . ID=g11311.t1.exon3;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . CDS 5245 5411 . - 2 ID=cds.g11311.t1;Parent=g11311.t1 NODE_2203_length_7291_cov_38.2004 . three_prime_UTR 5170 5244 . - . ID=g11311.t1.utr3p1;Parent=g11311.t1 #PROT g11311.t1 g11311 MCVYVCACAKMDRLQYEILSSNALLAVMASSIEHPVQLYVYDLSHGLAAQLSPQLLGKQINGIWHTAIIVYGTEYFFGAGINRGIPGQTYHGRPLRIEDLGTTTIPREVFEEFIAQLSADRFRHDKYHLLDHNCNTFTTEAAQFLVGRSIPDYIRGLPREFLNTPFGQMMRPYIDAMFSPQGPGLSGAVMAGDRLSESLQSAFASPSATPTSIHNSASATSPLPSTDALPPFCYEHGSVAQICNKLRSFVGELDSVPFELSEAIMRAEKVLTSAKDGGDVTAAKLRITREDMTGMAARALADVAIASLSSLEEPSLAQVMSAPMGAARLPVERLFPLLDILRLLSMHPPSHAACTQAFVVVAQRLLLSSTTRPSDAVRLTALRLGVNVLGSTRLGATAKSAAESTVNAEANANGNNSNALLDADVYVRCAVSALVDPAPAQSAGTVAAIRQAATALAYDIAVVFGAARTLDLDAAAEVSAALCHVVESEEDNETAYRAVSALVAFGKDATVAELIGTLSPNVNRLAGISDRHAKLCAQFNRVFASGMAA* # ORIGINAL: g11310.t1 original gene structure, not modified by PASA NODE_2203_length_7291_cov_38.2004 AUGUSTUS gene 279 3942 . - . ID=g11310;Name=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS mRNA 279 3942 . - . ID=g11310.t1;Parent=g11310;Name=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 2974 3942 . - . ID=g11310.t1.exon1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 2974 3942 . - 0 ID=cds.g11310.t1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 2487 2581 . - . ID=g11310.t1.exon2;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 2487 2581 . - 0 ID=cds.g11310.t1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 1709 2225 . - . ID=g11310.t1.exon3;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 1709 2225 . - 1 ID=cds.g11310.t1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 1188 1428 . - . ID=g11310.t1.exon4;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 1188 1428 . - 0 ID=cds.g11310.t1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 858 975 . - . ID=g11310.t1.exon5;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 858 975 . - 2 ID=cds.g11310.t1;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS exon 279 375 . - . ID=g11310.t1.exon6;Parent=g11310.t1 NODE_2203_length_7291_cov_38.2004 AUGUSTUS CDS 279 375 . - 1 ID=cds.g11310.t1;Parent=g11310.t1 #PROT g11310.t1 g11310 MAAMTILAFADAVVYKIGVTAPLGLGDPGLDTYASEIVDVAQMAAYEINTRSTPLSRRLSPGLNVTLHVRSEGYDQRVALFAAIAFNSIDHVDVVVGCDWSDDSLIMNQYLSQVGIPMVSPGSTSMRLADRASFPLFMRTVGWDGAQAKSLAHIARHFGWDYVGTMCSDDDYGKQLASRFRIEATLLNMTVVESQQFTREAASLNSAMMSLKKSGVKIILVSALGGDAARALQAAQANGMVGRDYVYIGTDGWLYDSFFADYGLSSFSAGVIGAVPFNGEGSGGFDAFLDGMTAYKSMFNSSLPGFDLASRSLFSPYEPYYYEAVYVAALGLDAAYRANVSLPAGATILYEEMTRVNFTGPTGPVAFDSSGERLAEYSLVNWVTWETRLRSVGRYLGANGTIVTMRAVTWGEGATSAPPDAVCVAGCIHGTCLKVAGVATCICHSNYDGVSCSLYVGSTVYTVAIAVGVTLGTLALVCGFVVAFVVMMRRKRDQVLRERNRRRIVIDFREIALLEHIGGGSFGEVFRGEFRGTEVAVKKIKYSIAHKLSYGSSAKSGTASAPMTRSILRKISGITLQEGIATFADEVDVMCSLRHPNVLLYMGCCEPPDLAIVTEYMAHGSLRDLIVVDRVPIRFEMKLRMMQDAARGMNYLHSCTPTFLHGDLKTANLLLNVNYVLKV # PASA_UPDATE: g2994.t1, single gene model update, valid-1, status:[pasa:asmbl_7806,status:12], valid-1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . gene 113 1032 . - . ID=g2994;Name=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . mRNA 113 1032 . - . ID=g2994.t1;Parent=g2994;Name=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . five_prime_UTR 1021 1032 . - . ID=g2994.t1.utr5p1;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . exon 689 1032 . - . ID=g2994.t1.exon1;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . CDS 689 1020 . - 0 ID=cds.g2994.t1;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . exon 384 477 . - . ID=g2994.t1.exon2;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . CDS 384 477 . - 1 ID=cds.g2994.t1;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . exon 113 157 . - . ID=g2994.t1.exon3;Parent=g2994.t1 NODE_5013_length_1078_cov_67.0678_potentialcontaminant . CDS 113 157 . - 0 ID=cds.g2994.t1;Parent=g2994.t1;3_prime_partial=true #PROT g2994.t1 g2994 MQVRGNAPGRYMLTVVAPGPGMSVQANVTIGACDGRPTYSSDNEVLCDKESAAAASSSSRSGGVLAVAIVIPTIVGVGGAVAMFFIGLRAHKKRVSKETHDRFVQNVIAHRTDLKDLELNRDLLEMYERIGSGEFGVVSKGRAFMNGKWKLCAIKQL # PASA_UPDATE: g1122.t1, single gene model update, valid-1, status:[pasa:asmbl_3378,status:12], valid-1 NODE_2052_length_7916_cov_43.6609 . gene 6607 7690 . + . ID=g1122;Name=g1122.t1 NODE_2052_length_7916_cov_43.6609 . mRNA 6607 7690 . + . ID=g1122.t1;Parent=g1122;Name=g1122.t1 NODE_2052_length_7916_cov_43.6609 . exon 6607 6815 . + . ID=g1122.t1.exon1;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . CDS 6607 6815 . + 0 ID=cds.g1122.t1;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . exon 6924 7065 . + . ID=g1122.t1.exon2;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . CDS 6924 7065 . + 1 ID=cds.g1122.t1;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . exon 7229 7366 . + . ID=g1122.t1.exon3;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . CDS 7229 7366 . + 0 ID=cds.g1122.t1;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . exon 7556 7690 . + . ID=g1122.t1.exon4;Parent=g1122.t1 NODE_2052_length_7916_cov_43.6609 . CDS 7556 7690 . + 0 ID=cds.g1122.t1;Parent=g1122.t1 #PROT g1122.t1 g1122 MALGVFTGPAWSFLLICLAVNCAGIAFISSASAAAVGSTSRSTQRLSFVHIDNSTRHFVDEHGRVCIFHGVNVVYKQFPFYPSLDVFDPQNSLSDVDMDNLSAWGFNVVRLGVMWPAVETSKGVYNHTYLREIARIIDGLEQRGIYTIVDNHQDVLHPRFCGEGVPDYAAVPTKGLGSFPLPNPAKLTKDAGGLPSPDDCLAHNFGL* # ORIGINAL: g1120.t1 original gene structure, not modified by PASA NODE_2052_length_7916_cov_43.6609 AUGUSTUS gene 1975 2733 . + . ID=g1120;Name=g1120.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS mRNA 1975 2733 . + . ID=g1120.t1;Parent=g1120;Name=g1120.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS exon 1975 2042 . + . ID=g1120.t1.exon1;Parent=g1120.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS CDS 1975 2042 . + 0 ID=cds.g1120.t1;Parent=g1120.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS exon 2280 2733 . + . ID=g1120.t1.exon2;Parent=g1120.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS CDS 2280 2733 . + 1 ID=cds.g1120.t1;Parent=g1120.t1 #PROT g1120.t1 g1120 MRRDVLNAEYSDSVMELTATVERALNSIVFASSVALSATRCTSSAGGNKPISNHEDARTTINSSGHLFPEHFNAGRSVQNIERLATCTTSRSGTVLRAEPAPINNRGCTLEFFVRVDIPCRSISIDRVTVGATATVGEFLDSVSALLAADESGRFGHVVSWDGCFIETRSLLG* # ORIGINAL: g1121.t1 original gene structure, not modified by PASA NODE_2052_length_7916_cov_43.6609 AUGUSTUS gene 4537 6183 . - . ID=g1121;Name=g1121.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS mRNA 4537 6183 . - . ID=g1121.t1;Parent=g1121;Name=g1121.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS exon 4537 6183 . - . ID=g1121.t1.exon1;Parent=g1121.t1 NODE_2052_length_7916_cov_43.6609 AUGUSTUS CDS 4537 6183 . - 0 ID=cds.g1121.t1;Parent=g1121.t1 #PROT g1121.t1 g1121 MAVCGRQAKKTAGVLIILVLFGYISLHFALRERADGHMHGIEYIPGHRHGGITVRQAVEAAAANKLALDRAADHDHVHADTEVKDTVSELPAGHMDATIHVHRIYRPPKWDHRPEIIMPQRDVSGVRAGGDDDLATVETNRPSSPNATRAMQNEPGDGEHSISFAVDAPFAPVEGTIWDESPMVYAHVPGDNNTVFLLIRGALLVRRVKLCGIVIAGDISRFIPLPIVNLIPPASRTYTPRLDHVSAVQCRLPTAGIDSRIIELGAQYTLKLQGDRKFLPTIARHREFARRTTQPLYELCAITQVRNRAVDLPDWLEYHRRIGFNHFVILDNNSTDNLRSIKFSHHVEVISWPWRRTQPGGFFYMRRLAIERCEWVAFFDSDEYIYPVSSRSLHNIVHFLQVEQPNVGAIFMRSKMMGADGHVQRPTVPVPIAYVHHSVDSWEPSPKTILRPCVSDDEMAIHDMKARLPYDSRPVPASDVFIMHYKVKSWQDYVRKYESRATTLDWQLPSGFDANNPTSLWRKLDETYSKVLYTDFRDFFNSVMQAEP* # PASA_UPDATE: g733.t1, single gene model update, valid-1, status:[pasa:asmbl_2212,status:12], valid-1 NODE_1636_length_10081_cov_40.6554 . gene 5525 10081 . - . ID=g733;Name=g733.t1 NODE_1636_length_10081_cov_40.6554 . mRNA 5525 10081 . - . ID=g733.t1;Parent=g733;Name=g733.t1 NODE_1636_length_10081_cov_40.6554 . five_prime_UTR 10081 10081 . - . ID=g733.t1.utr5p1;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . exon 8143 10081 . - . ID=g733.t1.exon1;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . CDS 8143 10080 . - 0 ID=cds.g733.t1;Parent=g733.t1;5_prime_partial=true NODE_1636_length_10081_cov_40.6554 . exon 7117 7836 . - . ID=g733.t1.exon2;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . CDS 7117 7836 . - 0 ID=cds.g733.t1;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . exon 6492 6702 . - . ID=g733.t1.exon3;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . CDS 6492 6702 . - 0 ID=cds.g733.t1;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . exon 5525 6098 . - . ID=g733.t1.exon4;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . CDS 5599 6098 . - 2 ID=cds.g733.t1;Parent=g733.t1 NODE_1636_length_10081_cov_40.6554 . three_prime_UTR 5525 5598 . - . ID=g733.t1.utr3p1;Parent=g733.t1 #PROT g733.t1 g733 GMSSEVGGFAATFDTSTLSVSGSVLSGARATGMRLAEGRGGLIASNDRSVAVVLACSIADCQAIATGGVFDASDGSQMTVTNVTATNVASATGPSVSAGGGFAHIRSSGAGAGTAYLRLTGCIVSHAASLYGGAVLVDKGGRASINNSVFEWAHAVYAGSAIAVFGSVNLTGVAIRDCASDGLGGAIFVEGGALLGTGLHFERVACPEGAALVVSGGSLVEIDGAEFVDIDAQLGVLEVGPHSDFLKIENAVFRGLSGETGSIVHAMGSSFVVFKGVLMEDIIAYKSAAVYLSGAVNMLAQNITVRDVHVTGSAFFNVGGNSDCTIVDLTFQDASATDSVLMWAHDNSIVTIVRAYIARTSAYPDDCGAIWVGGSAHVTAKDILAVNTTALQSAGFAVVADNGYLFLLRVTLSGASVLQNGGALRAVDNGTLFVQDSQFASISAGGMGGLLHIEAMARVTIINVTARDVSADGDALGGGLISVLLGVRPFARMQTAAGVVLRPSLKIGRSRASHVTAGHDGGCIAVDIPMNLNVADSSFVGCVVSTGDPRLFGSGGFLFGGPNSANGTWTILRVNVSSSRAALGPVVYTHWRLPDSITHSKKTFLVVMDNNSTYTSGPVFATPISRLVPDRNAFAVEPGMTLGHLTITAVDAYDQPVYVSPLRSLAIVLVEAAADKSAFQLSGNVGLAFSDVSITIIDVAVYGLPSSRPYGIRMVPGNVLWNASDPIDQPIFREGINVTLQDCTQGALPVTDSSYTPPRTKCMAPFCAPACQHGACAMSGMGFAANFTCVCDYGWLGKACDVPVMYTVLAIGTATLFFFVTLSFIRYRGLLASYFRKGYEDWRTKENRLTIVILVKQLSAKFIDTIGIITDTYAFLELLGRPSAEQYGIMPAYTGFYVVGTFLVAVSVVASSARIRYMLTVVKHPERADDMKLLRRKLFVTISILLVALFKNVPIMALNAYLTQQDSSHCVSVNGAFMLSLGWSAYSIGAKMPRFGKLLRLIGQLLSETQVSPQPGEDAVPRDAVPRDCAARRASLSAHMMRFWKWLLACRVRRQKRRRRHSDWDASAEIGAEMVENPLRASMETPHAQGGSRESDSDCALQQPMSQSTAVLVLHPVMESES* # ORIGINAL: g732.t1 original gene structure, not modified by PASA NODE_1636_length_10081_cov_40.6554 AUGUSTUS gene 2946 5156 . + . ID=g732;Name=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS mRNA 2946 5156 . + . ID=g732.t1;Parent=g732;Name=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS exon 2946 3015 . + . ID=g732.t1.exon1;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS CDS 2946 3015 . + 0 ID=cds.g732.t1;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS exon 3206 4280 . + . ID=g732.t1.exon2;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS CDS 3206 4280 . + 2 ID=cds.g732.t1;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS exon 4453 4550 . + . ID=g732.t1.exon3;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS CDS 4453 4550 . + 1 ID=cds.g732.t1;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS exon 4966 5156 . + . ID=g732.t1.exon4;Parent=g732.t1 NODE_1636_length_10081_cov_40.6554 AUGUSTUS CDS 4966 5156 . + 2 ID=cds.g732.t1;Parent=g732.t1 #PROT g732.t1 g732 MHRPELIALAVVALATFCAAFPHHDRHNVGRRVAADFWSQDDAENDGFLKSLASMYQCQQSGGNASASASQGTSQTSDLPQLLYSGNFSLLSCVQQAATQPSTIVVPATLGSIVSVSAQQASETSVPVLSATESLIPVTETVIPVTQVISSPASSPSPSPTTPVLSAPYQFGSCAFSLPNGLFLWTVGENTRRAKCDLAADFLVPPGYNLTSTLAEGNATSTGTQSKANGVFLTHEALTSAIIAFQGGSIAAAWADANTRPTLVQNTITGEGMVLQSVQAAYTPLRAMVSTLVTNYWHAWSAQQQQGGNASAIPQVIVAGNGIAGAIAQLCAMDIAVNILPSLASASQQVELAAVSFGSPRVGDKSFSTAYNAAVPGNIRVFNTEDFLPTFPPAIQRNQTASTGNSASASAGDQSGSSSSKILMQHTQGLLVPFTENMGSYIDNHVGAYEAFFGQTPTAQTQTLGSCNAASSGTGSS* # PASA_UPDATE: g731.t1, single gene model update, valid-1, status:[pasa:asmbl_2211,status:12], valid-1 NODE_1636_length_10081_cov_40.6554 . gene 149 450 . + . ID=g731;Name=g731.t1 NODE_1636_length_10081_cov_40.6554 . mRNA 149 450 . + . ID=g731.t1;Parent=g731;Name=g731.t1 NODE_1636_length_10081_cov_40.6554 . exon 149 450 . + . ID=g731.t1.exon1;Parent=g731.t1 NODE_1636_length_10081_cov_40.6554 . CDS 149 316 . + 0 ID=cds.g731.t1;Parent=g731.t1;5_prime_partial=true NODE_1636_length_10081_cov_40.6554 . three_prime_UTR 317 450 . + . ID=g731.t1.utr3p1;Parent=g731.t1 #PROT g731.t1 g731 VWGVGPLPAPESGHQDNRSILDKQHQMVAIMELAGKKMHSDGLREPEPPADDDHH* # PASA_UPDATE: g2141.t1, single gene model update, valid-1, status:[pasa:asmbl_4897,status:12], valid-1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . gene 142 4171 . + . ID=g2141;Name=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . mRNA 142 4171 . + . ID=g2141.t1;Parent=g2141;Name=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 142 368 . + . ID=g2141.t1.exon1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 142 368 . + 0 ID=cds.g2141.t1;Parent=g2141.t1;5_prime_partial=true NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 503 625 . + . ID=g2141.t1.exon2;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 503 625 . + 1 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 728 835 . + . ID=g2141.t1.exon3;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 728 835 . + 1 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 965 1131 . + . ID=g2141.t1.exon4;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 965 1131 . + 1 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 1392 2183 . + . ID=g2141.t1.exon5;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 1392 2183 . + 2 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 2437 2621 . + . ID=g2141.t1.exon6;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 2437 2621 . + 2 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 2894 3158 . + . ID=g2141.t1.exon7;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 2894 3158 . + 0 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . exon 3415 4171 . + . ID=g2141.t1.exon8;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . CDS 3415 4040 . + 2 ID=cds.g2141.t1;Parent=g2141.t1 NODE_2725_length_5320_cov_38.5102_potentialcontaminant . three_prime_UTR 4041 4171 . + . ID=g2141.t1.utr3p1;Parent=g2141.t1 #PROT g2141.t1 g2141 KATFTHCYVALVRRRGPVTLAGVGLRLSCGMAAGMSTAKAALCGGPAVCRSLPRPIRKDACVWIALSDGCRLASTIWRPTDSDVAPVPAILEYLPYRRADWTARRDETRHAYFAGHGYASVRVDMRGSGDSEGILLGEYLQQEQTDAMDVLDWISRQPWCTGSTAMYGKSWGGFNGLQVAALKPPSLKAIITLYSTDDRYADDVHYLGGCHSAIQGLPWASTMLAWQARPPDPAVFETAEAWGEAYRRRLEYNTPWMSQWSREQLRGDFWKHGSVCERPADIACAVLAIGGFADGYTDPVFRMMRAHESGTGAYGRAFRAIVGPWGHEWPDIGSPGPTIPYTTECLRWLDAHLGTGTADAESIALSEPMLRVFVRETTPPAPSIDTMRGRWVGYNKLPEVRALLVARATRTLSVASVCPGVASSAGAVASDHNGADAELEVLNYVPKGLVGAAAGDWLGWGVAGGDDLSDDQTADDRLSMCFDSAPLDADMTIVGLPSATVCLVPAAAVGLIAVRLCHVAPDGSWSALISRAVLNLCNSDDHSSSAPLTPGKRTVRSIPMSACSHVVPKGHVIRLAISTSYWPWVWPSPAQHHVPIGVCVSSEGDGALFTHVKLPLALPEDEVPLQLDLNAPAVQCAPLPRTVLTDAECGVNASPSSSCKLFGDFASEPCFVSQRRTELLGGNVVRLTASDGCSPWRLKLAPDGGPSESENVAPIVVQHASPSQRHITYAESCTNAFTINVDDPMSGEVRCDWRVHVRYGIDCDTPASMCSDRTDSNDEQRLCVDAIVCTSSTMRCEEGAFKIDNSVHVTVDGAPFYSRRHTDSIPRLLS* # ORIGINAL: g3214.t1 original gene structure, not modified by PASA NODE_2255_length_7051_cov_44.9372 AUGUSTUS gene 2 2840 . + . ID=g3214;Name=g3214.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS mRNA 2 2840 . + . ID=g3214.t1;Parent=g3214;Name=g3214.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS exon 2 2840 . + . ID=g3214.t1.exon1;Parent=g3214.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS CDS 2 2840 . + 1 ID=cds.g3214.t1;Parent=g3214.t1 #PROT g3214.t1 g3214 NVLVGGNPGKCFKCQCNGQSTVRAAPNNLISGDTCTATKATKANPGDYMCTCNTGYIGTFCDSCAPGYRKTTQVGVDGNTYVICTPCDSCTLDLLNIHVLPVEARLKAAEDNLGQINATVNDFQLDVTVLALNIKDNADNIKASDSVVAALSTSITNEIKAVNDKIDGVVTNVEDVKTRTEQFVGDIQTAFEDLTTEVNDVLSKANAAIATANGVAGDVLTATTNIATLFTKSAQQSDAIVDLKAKAKDASDAITVNTFNIEETKTNVDGLKTRVTTLGDDVGAAKSDIDTLFTQSADQLASISELNAKVKAAGDAISENSVSIDGTKTDIEGLKTRVTAVENGANGGAANAENRIASLENTVATQSNTISELRDQIVSLQTTINNLVVQVNGIGSAVDGKIDTAISAVDTEIDTLDARVTKLEGSAAACDKNPCPGNKLCRNVVGGSGFECYCGGTDVETADGCVDTSSTCVVNGAPICANGASCASFVDGFECSCAAGWRGVTCESAFTPCEAAPCHNGGVCSVSPVDKESFVCTCAPDVTGALCQYEGFQFDGKTFVGLTPPASFRNFRVAFTLSTKASAGVVFASFRTSPVSSDNVVIFLSGGRIVFAFAPAVYGCNADVSTCSGALVARTDAVVNDGTAYRVSLSIAKNVVVYNIAHDSDQTKVASGQLDITFPGGSTIDTTGPLYFGRLNPAISSSSYPRYVRDNVGFVGAIWKVLISLDGSADTRYSLVAGSPNIVANEVSNPGPILAAANAPGERINFASPNGYAQFVPRLLGDEFTVSVSLTATQAGIVFATASADGKDFAVIEVLAGGSLQFSWSSGGVTHTVTGPNVFGANVVVATIDKTTGPTEAGLGPRSSVTLSATVDGVPAADSVVDVAGPYASIDNTEGIWVGGAEAYPVAGSSTNTGLVGSVWALTVDGVRIASSSAVAFGEGTTLSA* # ORIGINAL: g3215.t1 original gene structure, not modified by PASA NODE_2255_length_7051_cov_44.9372 AUGUSTUS gene 3836 6976 . - . ID=g3215;Name=g3215.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS mRNA 3836 6976 . - . ID=g3215.t1;Parent=g3215;Name=g3215.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS exon 6770 6976 . - . ID=g3215.t1.exon1;Parent=g3215.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS CDS 6770 6976 . - 0 ID=cds.g3215.t1;Parent=g3215.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS exon 3836 6523 . - . ID=g3215.t1.exon2;Parent=g3215.t1 NODE_2255_length_7051_cov_44.9372 AUGUSTUS CDS 3836 6523 . - 0 ID=cds.g3215.t1;Parent=g3215.t1 #PROT g3215.t1 g3215 IELLKEILEEWKKEVDKKPEALSVDDALELLNLEKGKKHDDAVVRKAYFKLAQKYHPDKNPEGREMFEKVLKAYEFLCTRSAAKMDGPDPHRIDLLIKTQSILFVRHPDILEPYKYAGYPMLLRTVQMETAYEDLFSRSTPLLPAASELAYHTVNVSALNAEELRRDGGIQLLAEALNRCVSAISPRTTPEELSVVVSGHILKCYAVCGRFPECRALIRELPHFISDLSRCLWFRGAPKLTVAALECAASVAADQMLQDKLVDAGALWHLLLLLFDYDYTLDEGGVEASAENNKQEILNQHARLALRALARLGGYLKTPGDETPKNPRVSTSLRSLITPYLARQLEKDDPMQVLKVVCSNAENPYLIWNNGTRLEVKDWLEVQQESVVRHGVQDATLGTSFVFTALQEELRVGDIYIRIFNNQPTFVLEDTAGFARAILDYLQDRGPKVSMSPEAAAADGGVVGERLKLLEHSRMTLNAMRNLLTNNANTGLEKNFLGRLPVLFPYLAAEDDGSVQVAALEVIAAITGNPDCVNAIAEAAMLGRIMLVADKVTASYEAILRIVHTLSSNNKIVAEVLSKGAILYLLEMFCCSLKAPIREQTAGVFSKLAANKLHGPKISIVLAKFIPGVFLDAMRENTEAAVNMFESQQENPELIWNDNARKKVKDTIRTMRAELAAEQRRNPDFQWKLSDDFDVVYAELQGEILIGGVYLSLFVKNPGWALRNPRQFLVALMERYVLYVSRKSADEEVLKNLAAAICGLVRTQPGMSDQVASMGHIPKLLPALELDNVIFRKSCMDIIHQISDCVNCAEKLGQTQCIKPIMKAMDETRELSGTGAEAIRRMADHNACEKGCIVAQALKVGAIAFLLGLLERGLEVVENPAATKAHIANALKSLAKDVVHGDEVQKKLDASPIWAAYRDQKHDLFITGTGIAGYITGPVAATKGYLTAGPANASSEHPPPVDND* # ORIGINAL: g3965.t1 original gene structure, not modified by PASA NODE_3374_length_3601_cov_37.2362 AUGUSTUS gene 308 3601 . + . ID=g3965;Name=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS mRNA 308 3601 . + . ID=g3965.t1;Parent=g3965;Name=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 308 376 . + . ID=g3965.t1.exon1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 308 376 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 578 674 . + . ID=g3965.t1.exon2;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 578 674 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 854 931 . + . ID=g3965.t1.exon3;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 854 931 . + 2 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 1178 1245 . + . ID=g3965.t1.exon4;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 1178 1245 . + 2 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 1422 1499 . + . ID=g3965.t1.exon5;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 1422 1499 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 1817 1918 . + . ID=g3965.t1.exon6;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 1817 1918 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 2122 2220 . + . ID=g3965.t1.exon7;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 2122 2220 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 2443 2525 . + . ID=g3965.t1.exon8;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 2443 2525 . + 0 ID=cds.g3965.t1;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS exon 2832 3601 . + . ID=g3965.t1.exon9;Parent=g3965.t1 NODE_3374_length_3601_cov_37.2362 AUGUSTUS CDS 2832 3601 . + 1 ID=cds.g3965.t1;Parent=g3965.t1 #PROT g3965.t1 g3965 MPPKRLFGNFDRDFISERRKGLQSFVDAILADPVFSSIFEVKNFFDPKSYGTDFSEEALREASMYFRSEPRWEISEPLKRFGWRLRKHYFAVQPKTGSTQILTWTEIGPDCAFRREDIGSIMKHALPNIKHPYIFPTVYADLKGSGLVIRAFTDKGSLRDVIYRTKPKKGYMRKYYDGPGRPLDDKFIRKNGREILEALRFLSDNGFPYAHLHAGNVLVEDGVCRLTDLEDGLLGVPCRHKQHIITLRKIVGQDAENAYLFGLLLYEMAFGREVEGASIESVPPECPAGLRPVLESLITVTAVKTGMPTLASLLGNPYFADVQPGQPPGPDGSKISFKLKDRAKEMLKAARDAQEKRMAEEQKRSSAFRRLSRMSKKDKGANSEDEKASGKPKKKKAAAAASASSSGPTTTIAAPNLTSFAAAAPVAPATPAPPAQQQAPSAPTPPPAAPKAPSAPTPPPAAPKAPSAPTPPPAAPKAPAA # PASA_UPDATE: g1295.t1, single gene model update, valid-1, status:[pasa:asmbl_974,status:12],[pasa:asmbl_976,status:12],[pasa:asmbl_977,status:12], valid-1 NODE_1256_length_12676_cov_41.0217 . gene 606 3730 . + . ID=g1295;Name=g1295.t1 NODE_1256_length_12676_cov_41.0217 . mRNA 606 3730 . + . ID=g1295.t1;Parent=g1295;Name=g1295.t1 NODE_1256_length_12676_cov_41.0217 . five_prime_UTR 606 868 . + . ID=g1295.t1.utr5p1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . exon 606 901 . + . ID=g1295.t1.exon1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . CDS 869 901 . + 0 ID=cds.g1295.t1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . exon 998 1070 . + . ID=g1295.t1.exon2;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . CDS 998 1070 . + 0 ID=cds.g1295.t1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . exon 1228 1321 . + . ID=g1295.t1.exon3;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . CDS 1228 1321 . + 2 ID=cds.g1295.t1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . exon 1631 1717 . + . ID=g1295.t1.exon4;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . CDS 1631 1717 . + 1 ID=cds.g1295.t1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . exon 1872 3730 . + . ID=g1295.t1.exon5;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . CDS 1872 3240 . + 1 ID=cds.g1295.t1;Parent=g1295.t1 NODE_1256_length_12676_cov_41.0217 . three_prime_UTR 3241 3730 . + . ID=g1295.t1.utr3p1;Parent=g1295.t1 #PROT g1295.t1 g1295 MGRKYKTRFPMARIKKMMQTDDDVGKVASATPLCISRACELFMEFLVLKSCDRTKAHNAKTMSVEHVKECIVSEPKFDFLRDRAGDLRPDQVQAASAGSAGPAKTHRGSVQQAQHQHQQQQQQQQHHHHHQQQQQQLQLQQQQQQHAAQQDAASAAAAAERHIQAQIAAHQQMHDQQLHQQQAQLQQQRMYSTSLLPLGHQPQQAMPTQQQQQQQQQQKQQQQQQQQHQKQQQQQLPMHQQFIDAAAQPVKRGRGRPRKGEEVNPPKVKVGGVVKQKPPPLPDGEKRKRGRPRKTELVLTGHVHVPMMSQPQPQLQGVGMMNRMAAAVSPKEGGRGRGRGRGKKQAVDSTGDGHQDPFGMSAGGLSGGMSSPGQSFDSFSFSQQLSQQPQTHFSMFNGMGGPYQHPGAQMFPGQYATQFGGVGQQSFNQQQQYNPQSQQQQHQQHQQHQQHQQHQQHQQQQAQLNYWQGGGGGGYVAPSAMGHMPPQQPQSQQQQQQQQQQQQQQQQQPYAMQGAQGMQPPQQPQMPMHMHMQLPFSSGSVKRSGYEDEYD* # PASA_UPDATE: g1298.t1, single gene model update, valid-1, status:[pasa:asmbl_973,status:12], valid-1 # PASA_UPDATE: g1298.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_972,status:12], valid-1 NODE_1256_length_12676_cov_41.0217 . gene 9089 12483 . - . ID=g1298;Name=g1298.t1 NODE_1256_length_12676_cov_41.0217 . mRNA 9089 12483 . - . ID=g1298.t1;Parent=g1298;Name=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 12007 12483 . - . ID=g1298.t1.exon1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 12007 12483 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 11614 11736 . - . ID=g1298.t1.exon2;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 11614 11736 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 11419 11510 . - . ID=g1298.t1.exon3;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 11419 11510 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 11050 11170 . - . ID=g1298.t1.exon4;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 11050 11170 . - 1 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 10755 10901 . - . ID=g1298.t1.exon5;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 10755 10901 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 10402 10635 . - . ID=g1298.t1.exon6;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 10402 10635 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 9867 10184 . - . ID=g1298.t1.exon7;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 9867 10184 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 9636 9705 . - . ID=g1298.t1.exon8;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 9636 9705 . - 0 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 9089 9480 . - . ID=g1298.t1.exon9;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . CDS 9209 9480 . - 2 ID=cds.g1298.t1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . three_prime_UTR 9089 9208 . - . ID=g1298.t1.utr3p1;Parent=g1298.t1 NODE_1256_length_12676_cov_41.0217 . mRNA 9089 12483 . - . ID=g1298.t1.1.5b6be70a;Parent=g1298;Name=g1298.t1 NODE_1256_length_12676_cov_41.0217 . exon 12007 12483 . - . ID=g1298.t1.1.5b6be70a.exon1;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 12007 12483 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 11614 11736 . - . ID=g1298.t1.1.5b6be70a.exon2;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 11614 11736 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 11419 11510 . - . ID=g1298.t1.1.5b6be70a.exon3;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 11419 11510 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 11050 11170 . - . ID=g1298.t1.1.5b6be70a.exon4;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 11050 11170 . - 1 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 10755 10901 . - . ID=g1298.t1.1.5b6be70a.exon5;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 10755 10901 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 10402 10635 . - . ID=g1298.t1.1.5b6be70a.exon6;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 10402 10635 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 9867 10154 . - . ID=g1298.t1.1.5b6be70a.exon7;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 9867 10154 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 9636 9705 . - . ID=g1298.t1.1.5b6be70a.exon8;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 9636 9705 . - 0 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . exon 9089 9480 . - . ID=g1298.t1.1.5b6be70a.exon9;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . CDS 9209 9480 . - 2 ID=cds.g1298.t1.1.5b6be70a;Parent=g1298.t1.1.5b6be70a NODE_1256_length_12676_cov_41.0217 . three_prime_UTR 9089 9208 . - . ID=g1298.t1.1.5b6be70a.utr3p1;Parent=g1298.t1.1.5b6be70a #PROT g1298.t1 g1298 MCCVLCLLTDTSPHVCQQVPVGDQPEDIEKQIRNLVRQYASNPNSIILAVTPANTDLANSDALKVAKSLDPEGNRTLGVITKLDLMDAGTDALDVLAGRVLPIKHGYVGVVNRSQQDINESRSIRDALRHEADYFRTHAAYGPISNRCGTAFLTRTLNKVLMNHIRECLPELKARVNALLVQAQQQMLVYGDSVLDKKNKAYLLLQILTKFASSYNERIEGTSGDIQTAELYGGARICYIFHETFGGFLDQMDPLEGLTLNDIRTAIRNATGPRPALFVPEVSFELLAKRQIRALEYPSLRCLELVHEELSRMIQQCETPLLNRFPSLKERVFDTVTQLIERRLPAATAMIESLVAIELAYVNTNHPDLMAGTRLAESRRIAQQQQQLQAQQQWEAKRVSIPSTSASQEDAARPPSAAVDVEPVKPIAIHASSAGAAPGHPQQQSHQAQQAQQAQQAQQAQGAGIFNYLFGQRGSKGISVKSPTHGDMGSHASDGHDAALAMESNVPVHLQERRTLSTKEQMETELIQSLISSYFAIVRKNIQDSVPKAIMHFLVNWMKESLQGELVSSLYKEDLVDELLNEAPHLAAQRQRAVDMLAALKRAQKILADVKNDMFEG* #PROT g1298.t1.1.5b6be70a g1298 MCCVLCLLTDTSPHVCQQVPVGDQPEDIEKQIRNLVRQYASNPNSIILAVTPANTDLANSDALKVAKSLDPEGNRTLGVITKLDLMDAGTDALDVLAGRVLPIKHGYVGVVNRSQQDINESRSIRDALRHEADYFRTHAAYGPISNRCGTAFLTRTLNKVLMNHIRECLPELKARVNALLVQAQQQMLVYGDSVLDKKNKAYLLLQILTKFASSYNERIEGTSGDIQTAELYGGARICYIFHETFGGFLDQMDPLEGLTLNDIRTAIRNATGPRPALFVPEVSFELLAKRQIRALEYPSLRCLELVHEELSRMIQQCETPLLNRFPSLKERVFDTVTQLIERRLPAATAMIESLVAIELAYVNTNHPDLMAGTRLAESRRIAQQQQQLQAQQQWEAKREDAARPPSAAVDVEPVKPIAIHASSAGAAPGHPQQQSHQAQQAQQAQQAQQAQGAGIFNYLFGQRGSKGISVKSPTHGDMGSHASDGHDAALAMESNVPVHLQERRTLSTKEQMETELIQSLISSYFAIVRKNIQDSVPKAIMHFLVNWMKESLQGELVSSLYKEDLVDELLNEAPHLAAQRQRAVDMLAALKRAQKILADVKNDMFEG* # PASA_UPDATE: g1297.t1, single gene model update, valid-1, status:[pasa:asmbl_975,status:3], valid-1 NODE_1256_length_12676_cov_41.0217 . gene 6729 9099 . + . ID=g1297;Name=g1297.t1 NODE_1256_length_12676_cov_41.0217 . mRNA 6729 9099 . + . ID=g1297.t1;Parent=g1297;Name=g1297.t1 NODE_1256_length_12676_cov_41.0217 . five_prime_UTR 6729 7327 . + . ID=g1297.t1.utr5p1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 6729 7405 . + . ID=g1297.t1.exon1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 7328 7405 . + 0 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 7596 7732 . + . ID=g1297.t1.exon2;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 7596 7732 . + 0 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 7882 8047 . + . ID=g1297.t1.exon3;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 7882 8047 . + 1 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 8215 8257 . + . ID=g1297.t1.exon4;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 8215 8257 . + 0 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 8615 8800 . + . ID=g1297.t1.exon5;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 8615 8800 . + 2 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . exon 9001 9099 . + . ID=g1297.t1.exon6;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . CDS 9001 9038 . + 2 ID=cds.g1297.t1;Parent=g1297.t1 NODE_1256_length_12676_cov_41.0217 . three_prime_UTR 9039 9099 . + . ID=g1297.t1.utr3p1;Parent=g1297.t1 #PROT g1297.t1 g1297 MRRPVAGAAFPCLVVPAALNFVAEEEATYKQVLTIYNPFEFPLKYKVLSTAPDRYVACPFLGVLKPSSSLDIVIRLKEAAASPREDKLKIEIADAKTDAVLGKKVIVCRVIPASLAEVSFADLRESEADAAMISQFRASQKAAESRGGVASASHNYASQAIVALVVLACIGVIVAPTAPPGGPAGITQFAFSAGQQLGAAFILGMVTLAILRAFG* # ORIGINAL: g1296.t1 original gene structure, not modified by PASA NODE_1256_length_12676_cov_41.0217 AUGUSTUS gene 3775 6157 . - . ID=g1296;Name=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS mRNA 3775 6157 . - . ID=g1296.t1;Parent=g1296;Name=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS exon 5475 6157 . - . ID=g1296.t1.exon1;Parent=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS CDS 5475 6157 . - 0 ID=cds.g1296.t1;Parent=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS exon 4579 5361 . - . ID=g1296.t1.exon2;Parent=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS CDS 4579 5361 . - 1 ID=cds.g1296.t1;Parent=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS exon 3775 4525 . - . ID=g1296.t1.exon3;Parent=g1296.t1 NODE_1256_length_12676_cov_41.0217 AUGUSTUS CDS 3775 4525 . - 1 ID=cds.g1296.t1;Parent=g1296.t1 #PROT g1296.t1 g1296 MGLTSSSIRRASAGVNATDAGAPATGHQPSRTQRHVHAAERSSRAQPSVSAGADSHAGAGGRVVEAGRRDGARHADDFLVDDFVVDDQEVERDTTTTPMAFNFARLLGRDASDASDAFLNTGWRATDGRPAQHLTSWRPIPSSQASAPTPRSGHTAVCDGTYVYVFGGYHYRRCYAELYRLHLATRVWEHMPVRGLVPAETASHSAVLLGHRMYCFGGSGPNFGHMNSDFLLVCDVRTGRWSHARALIGGSPTPDWTDDEDAGGDAGGRHRWQGAAGGTAGGDAAIYDRLWTFNMDAFDDWGLSAPDRADVLATIRDMLGWPPGEADGSVGPQAGAGGAGQHGRAGARVSNNLRRRTRRAIGSDGLDGTGDGQHAERIALNAVTAAAGAPGLGWVHGQTAGVADGVDTSSSGMSTDSDDVDSDIESEVDDSTGMSTDSDSEEDSEEDGPVIVGEGLLHGDVRHVRDASGVAAMAATTHGGQSGERPNARVFYGDMHAYHVPSGVWRAVGRLVELARPTPRYRHESVVVGGRLYVLGGGMPDPDAEADGVYMEHIASFDPETERWERRACKAADGHSLPHSRRSHACVAHGTSIFMFGGTNGQIVFGDLWQLDTRTLEWRLLHGDLPRPRTAFSVGGYLGLAAEDDKVVGPCPRYFHSACISRAGLLTVFGGCLDTSGQNRCNDAYTRWVCVPSLQDLCIDAVARDIGPRMRGPLADVAELKATIPPTLHERLFGCASD* # ORIGINAL: g3023.t1 original gene structure, not modified by PASA NODE_16305_length_234_cov_44.3585_potentialcontaminant AUGUSTUS gene 1 209 . - . ID=g3023;Name=g3023.t1 NODE_16305_length_234_cov_44.3585_potentialcontaminant AUGUSTUS mRNA 1 209 . - . ID=g3023.t1;Parent=g3023;Name=g3023.t1 NODE_16305_length_234_cov_44.3585_potentialcontaminant AUGUSTUS exon 1 209 . - . ID=g3023.t1.exon1;Parent=g3023.t1 NODE_16305_length_234_cov_44.3585_potentialcontaminant AUGUSTUS CDS 1 209 . - 0 ID=cds.g3023.t1;Parent=g3023.t1 #PROT g3023.t1 g3023 MSIVVPLSTLGLVDGPRSAASPLARTVQSIVDTGDTADFIVFSDEYSTNRPQGSFLDSRKIPVGIRDEL # PASA_UPDATE: g14209.t1, single gene model update, valid-1, status:[pasa:asmbl_4055,status:12], valid-1 NODE_232_length_30279_cov_46.7844 . gene 7288 12326 . - . ID=g14209;Name=g14209.t1 NODE_232_length_30279_cov_46.7844 . mRNA 7288 12326 . - . ID=g14209.t1;Parent=g14209;Name=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 12056 12326 . - . ID=g14209.t1.exon1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 12056 12326 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 11721 11838 . - . ID=g14209.t1.exon2;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 11721 11838 . - 2 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 11376 11514 . - . ID=g14209.t1.exon3;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 11376 11514 . - 1 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 11021 11104 . - . ID=g14209.t1.exon4;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 11021 11104 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 10619 10792 . - . ID=g14209.t1.exon5;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 10619 10792 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 10323 10458 . - . ID=g14209.t1.exon6;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 10323 10458 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 9916 9980 . - . ID=g14209.t1.exon7;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 9916 9980 . - 2 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 9713 9760 . - . ID=g14209.t1.exon8;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 9713 9760 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 9369 9530 . - . ID=g14209.t1.exon9;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 9369 9530 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 8699 9043 . - . ID=g14209.t1.exon10;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 8699 9043 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 8348 8518 . - . ID=g14209.t1.exon11;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 8348 8518 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 8032 8136 . - . ID=g14209.t1.exon12;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 8032 8136 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . exon 7288 7857 . - . ID=g14209.t1.exon13;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . CDS 7693 7857 . - 0 ID=cds.g14209.t1;Parent=g14209.t1 NODE_232_length_30279_cov_46.7844 . three_prime_UTR 7288 7692 . - . ID=g14209.t1.utr3p1;Parent=g14209.t1 #PROT g14209.t1 g14209 MAIMHVHNSALRSVCHEDVSLKAPILYFVSRNPLPSGGTVRPFASLGARTADSSFPSWHFLGRNFRVGAATAAAGMAVALYVWTRESHASASRQPTSRELCDHVRMNSVRQLQQAVQSGADPNGRHPLGWTALHLAAVRGSVEVVKALLEAGADPDVGDEYDFPRLLSESMQRAFQALEGRRDEFDRRIDPRRSFVGFTALHYAVLVDALPIVRLLLEGGADPLVKDHEGHTPIDYTDPASEAAPGSVAAKIRQLLSDYEGKAKEEKERRDKEMRRKYPLEQRLKERIIGQLEPIHAVAAAIRRKENGWQHEETPLVFLFLGSSGVGKTELAKQIAKYIHENNDKGFIRIDMSEFQTKHEVSKFIGAPPGYIGHDEGGQLTETLRACPNAVVLLDEVEKAHPDVLTVMLQLFDEGRLTDGKGKTISCPDAIFVMTSNLASDEIAAHAIELRREAKRQESGAHPGGRMGVRHPQATAPPSTASLTAAAAPDASHHPHPQAQTHADPTPLKGKSSEGGVSERFKEDVVRPILKAHFQRDEFLGRINEILYFLPFDDIELKALASMEMDHWAKKAESRHGIKLTWAPEVLDVVIRGYNVHYGARSIRNEVDRRVINMIALAHEKDEVAPGDSVHVTGANGHIGLQVTRGERKSGWGGLLRFGR* # PASA_UPDATE: g14212.t1, single gene model update, valid-1, status:[pasa:asmbl_4054,status:12], valid-1 NODE_232_length_30279_cov_46.7844 . gene 25488 30078 . - . ID=g14212;Name=g14212.t1 NODE_232_length_30279_cov_46.7844 . mRNA 25488 30078 . - . ID=g14212.t1;Parent=g14212;Name=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 28534 30078 . - . ID=g14212.t1.exon1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 28534 30078 . - 0 ID=cds.g14212.t1;Parent=g14212.t1;5_prime_partial=true NODE_232_length_30279_cov_46.7844 . exon 28252 28330 . - . ID=g14212.t1.exon2;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 28252 28330 . - 0 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 27945 28049 . - . ID=g14212.t1.exon3;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 27945 28049 . - 2 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 27398 27611 . - . ID=g14212.t1.exon4;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 27398 27611 . - 2 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 26977 27117 . - . ID=g14212.t1.exon5;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 26977 27117 . - 1 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 26661 26781 . - . ID=g14212.t1.exon6;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 26661 26781 . - 1 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 26360 26464 . - . ID=g14212.t1.exon7;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 26360 26464 . - 0 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 25978 26074 . - . ID=g14212.t1.exon8;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 25978 26074 . - 0 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . exon 25488 25844 . - . ID=g14212.t1.exon9;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . CDS 25672 25844 . - 2 ID=cds.g14212.t1;Parent=g14212.t1 NODE_232_length_30279_cov_46.7844 . three_prime_UTR 25488 25671 . - . ID=g14212.t1.utr3p1;Parent=g14212.t1 #PROT g14212.t1 g14212 VGAEDLANDSWVKVGRSDAYGVLSVDGQSVLKTRAARVAPTIDWGESTTTVVGVTSVITVEIHKRQLLRGDTVVGFVDIPVASLPAEAVAGQEREVRLRLRKDDRNDVVGDVLLRVALAGPAQPSSGAPAPAMASSSVTMRPSTGGDTSALLVPTITTTHASGVATGSSSPTVRSPASARDRPLSVASPMSTPSAADSAALPAGWEMRLDARGRSYYVDHNSRTTSWERPTAASVAVGVSPVAVPVASAAGTSVAARSSVVSAAPPTADAAGPLPAGWEMRFDQRGRPYYVDHNTRTTTWARPTAATINAYARWQQQNQANQLAARQLHQQRSMFSSSGAGGGSTASGAPLVTSGVGPSTAAAVGTAGATPAAGGVSGASGSDATASADDGELGPLPAGWERRRTPQGREYYVDHTTRQTTWDDPRKRPINPASLPLPAGWEERMTADGRQFFVDHNSRTTTFEDPRVKYVQSLAALPKYQRDFQVKVTNFRLSMAQLQHPGECKLQVSRATLFEDSVQQVMHTKPADLRRRLMLKFRGEDGLDYGGVAREWFFLLSHEMLNPMYCLFQYSDNTTYTLQINPDSSINPEHLLYFEFIGRVVGLAIFHSKVIDCGFTQAFYKRMLGKPTVMADIESVDQDYHKSLVWIRDNDISECGLGLTFSIDYDSFGEVKSHELKPNGSDIAVTEENKKEYLDLVTEWRLTRGIREQTEAFFKGVSDIVPLQKLRIFDEKELELLICGLNEIDVEDWCVNTIYRTYNPTSPQVKWFWKALQAFSNEKRARVLQFVTGTSRVPVGGFKDLHGSNGPQRFCIEKLGDENWLPRSHTCFNRLDLPPYKSYEQLVEKLTLAIEETQGFASE* # ORIGINAL: g14208.t1 original gene structure, not modified by PASA NODE_232_length_30279_cov_46.7844 AUGUSTUS gene 630 6561 . - . ID=g14208;Name=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS mRNA 630 6561 . - . ID=g14208.t1;Parent=g14208;Name=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 6405 6561 . - . ID=g14208.t1.exon1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 6405 6561 . - 0 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 5736 5870 . - . ID=g14208.t1.exon2;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 5736 5870 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 4983 5354 . - . ID=g14208.t1.exon3;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 4983 5354 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 4771 4863 . - . ID=g14208.t1.exon4;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 4771 4863 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 4234 4629 . - . ID=g14208.t1.exon5;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 4234 4629 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 3927 4082 . - . ID=g14208.t1.exon6;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 3927 4082 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 3538 3711 . - . ID=g14208.t1.exon7;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 3538 3711 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 3181 3322 . - . ID=g14208.t1.exon8;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 3181 3322 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 2830 3002 . - . ID=g14208.t1.exon9;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 2830 3002 . - 1 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 2192 2605 . - . ID=g14208.t1.exon10;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 2192 2605 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 1747 1934 . - . ID=g14208.t1.exon11;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 1747 1934 . - 2 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 912 1388 . - . ID=g14208.t1.exon12;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 912 1388 . - 0 ID=cds.g14208.t1;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 630 656 . - . ID=g14208.t1.exon13;Parent=g14208.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 630 656 . - 0 ID=cds.g14208.t1;Parent=g14208.t1 #PROT g14208.t1 g14208 MRYYRTGIPLQGFYARVVSLVSAILYVVAISVSVSVDAQRQVAVVFEKDVVTNGVPNLFQIQAWEACKAAEPRLNINCTLFIRHPTIYPTFLTSLAQNGTHDHIIAAGVRLAGLIDAAARAASANTTLCMVDSSVASSTGVRNLQGLVFREDQSGFMAGALAGLVTANRTVGVVAGVPSAAVQRFRNGFYAGVRYTCPSCDVVGMYVPSFSSVPLGIAAASQLIDSGCDVIFGAGGTMGSNAIFYAAGRGVQVIGVDADESLTTFANVTDPRRNLLLASAIKRVDVAVTLALEDRFGAGPFVGGDKSISAALGGVQLSDCPTAAACGVWAEKVSVTEYSPGTVCPVSRLVQRREVLSGVTSALVQNTLSAGLTSDGRFFSMERAASNTWVSVTSWGRWPSSVRGHVLVNIGKNAMLAYGGLSTLNDVVGAGFTFNLDTLEWEGVSASAGSQAQPGSRWGHSACPLAEGGAIIYGGASSFAVAGSTLGDAWLFNASARAWTQFNLTGGVFPSPRMGHSAALVGSVMYVYGGMSSTLTILGDFWSLNIVTGAWTLIAPLGTPPSAAHGTVLVAKADGTSLYLYGGEYSGGVLSDQFAVFSIETGRWEALSPLRTRVSHSAAAHVGMDRIAFIGGSSETGRLAETRVYNTLHGVFLDNADLALPYPIAQHAVVAVNQSATAGACMYVPPFDTLMVCAPSTRIAVISLGGATGDAGPHGPRPAFLVAQMDTAVLDAQGPGGATAGSAAKETTVTVAVVVPVGVLALAVLVIVWIRRRHDRIAKHHRQAWRVDIDALEIETLIGEGVFGKVYRGRWRGAVVAIKTLRSGQTGSRNNIIDSPLELMLARAEICDTQHALKRAEVPVDTGVLMRRQQYDVLQRTCVDAVRGETEPAERMESLLATAKVSQWSVKNQPGHHGTLLQSLRRIFSGRTAVGMDTHEKRSFREEIDVMCLMRHPNIVLFMGACVEDPG* # ORIGINAL: g14210.t1 original gene structure, not modified by PASA NODE_232_length_30279_cov_46.7844 AUGUSTUS gene 13638 19644 . - . ID=g14210;Name=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS mRNA 13638 19644 . - . ID=g14210.t1;Parent=g14210;Name=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 18048 19644 . - . ID=g14210.t1.exon1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 18048 19644 . - 0 ID=cds.g14210.t1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 17637 17928 . - . ID=g14210.t1.exon2;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 17637 17928 . - 2 ID=cds.g14210.t1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 16711 17497 . - . ID=g14210.t1.exon3;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 16711 17497 . - 1 ID=cds.g14210.t1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 15809 16461 . - . ID=g14210.t1.exon4;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 15809 16461 . - 0 ID=cds.g14210.t1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 14171 15573 . - . ID=g14210.t1.exon5;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 14171 15573 . - 1 ID=cds.g14210.t1;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS exon 13638 14011 . - . ID=g14210.t1.exon6;Parent=g14210.t1 NODE_232_length_30279_cov_46.7844 AUGUSTUS CDS 13638 14011 . - 2 ID=cds.g14210.t1;Parent=g14210.t1 #PROT g14210.t1 g14210 MPRNSHRKPAILFILALFGLALAAAEAASSPLFVLQDRFGASQPPQPIEVDSIDPTLLAELRGGTVHVVGPNGLETPFQVLSTDTLVVHSSLPGSPRRFQYGIIAADPDSNEIFLNTPHSLLAGAALSFVAQESNGPLPGGLSEGVIYYVHSVRYDSWYNTPRYRLSVDASLAEVVDIKSTGNADLIAHALVFENATNSFYRLDHQYFRGMPLSLDMDPARTDLPTPLSPIGTYYVIPLNNNRFQLAATVADAHANIAISIVAATDAALPYDGWVRLEFHVADGAPSPLVAPAHPASGTYTDDGRFYEVTNGLTGVRITFINAMPPVLAPIQGILGADGVWYADNDGAKNATLRVPDIRSHKFDLLVAEDLLSKYNFEVIESGSLLVRVRASYETNRPRYGDGSRWYVTSVDVNKNTLIVKDDEGNAGLSWHTRWPVEPIAAPDAELPCGLLSGVTYYPTVDFWDPVAKLTYVRLLQTPTGPEVDITCTGTGGANAFWLTETINFNGTGFFTQEITLYANHKSILIEDDFDTELQYFVNLYKSAKFEPNTARFRGFGTDDTACGYQISPDGTEEAAVIGGYTMTDVISPFDYTNSRIPMAPGAGKCADPTRWRSAPTWYMGTGVNSGYYWMLYNSTDASRNANAPLFGYFLGRLSSYLQTLNTGPSVYTSPTHEDSGYGPAAGFTNYFFTRRADGQRTTRTRKQWGIYASLASELKPLSEYQPIAIERHALAGIRISSLIRYQLDFPSPAAWQAIGGDATNFNKMVAKITTNDTFANYLLTYNPTRPYGDIVQYIRNRTTASAEEILREMELFTWQVANIMSSGDGAFDKRVHFYTMVSDWQTLHQYKARVLLTLGGLTTAQEDRVKACLAFIGGIIWDNDFMPFEHDVFDEAGNANQNAALVYHRAQSALILPNHPAMATRLPTARSMVLTKFNEYVSAEGAPRGGTWYERPGVDPAILAMLEFGTFGSPRQYDRVVSYASWYLSALTPHEPQIAGGRKLVALGDGSTYSSSFAAVVGKLLRKLFGPTSIRATELQWAWAEQQTAYSKIVYDTDWAPTFLIIDPDARANRPLLGSVNFPGYWTSLRQAQHTPYETAAWLIKGPFYIDHRHFDMGQLTMYALSAPLIIDWNANINHPATYGGYLHSKVFYERSLASISVSAWDSPEASIRGGDYDPFYYGWPDDSSRSESVPNFNQASYASSVSLVRDTLLDSWKRAVTLVSRTPDRPIIFVRDEFTGPGAGEAKVLSWWVEASGEMETPAGPMTPPPRFYSRDDTSSELPSATPAASFPAGEYRRFGFSGNQFPLHRAGGIDFDVHVDAGNAVDAPQFVVGAWSTQALSGREDYESDHLRGDTYRDRQSVIRVRSRASSLGTVFLPVEKGSFAAAGVVRRAPCGTLVTRADVGDRACFSAAGYSYADGLSVSVASYGVAPVWVDSELGTAARLAVEGGAAEVTCDLVLGTARVTLLGPAGTRMVTIACLGAAVAFAQDDNPMSVGNQFTFVYAGGFTVQYSFVALPTNTSIASETYRDPQEAMRVAADGYAGLLVLRRTGLAFACRSTAKGSSCMSLAADGGTKWTEVRGIGRDGVWVRGYEVHSGTVFGSPSIEDLTLYLLRDGQWKLASESWISLYAQEGAVDGTVPIPLKKGFPVPPVRVPPAQGSAFRTYLWATQRGVGTSTVDNPTTVRYSAVFDCTEECPARRR* # PASA_UPDATE: g14211.t1, single gene model update, valid-1, status:[pasa:asmbl_4052,status:12], valid-1 NODE_232_length_30279_cov_46.7844 . gene 20906 24649 . + . ID=g14211;Name=g14211.t1 NODE_232_length_30279_cov_46.7844 . mRNA 20906 24649 . + . ID=g14211.t1;Parent=g14211;Name=g14211.t1 NODE_232_length_30279_cov_46.7844 . five_prime_UTR 20906 20987 . + . ID=g14211.t1.utr5p1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 20906 21241 . + . ID=g14211.t1.exon1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 20988 21241 . + 0 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 21782 21856 . + . ID=g14211.t1.exon2;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 21782 21856 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 21994 22086 . + . ID=g14211.t1.exon3;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 21994 22086 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 22353 22427 . + . ID=g14211.t1.exon4;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 22353 22427 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 22881 22952 . + . ID=g14211.t1.exon5;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 22881 22952 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 23108 23176 . + . ID=g14211.t1.exon6;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 23108 23176 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 23429 23509 . + . ID=g14211.t1.exon7;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 23429 23509 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . exon 23968 24649 . + . ID=g14211.t1.exon8;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . CDS 23968 24427 . + 1 ID=cds.g14211.t1;Parent=g14211.t1 NODE_232_length_30279_cov_46.7844 . three_prime_UTR 24428 24649 . + . ID=g14211.t1.utr3p1;Parent=g14211.t1 #PROT g14211.t1 g14211 MKSTAQQARHVRISATARLAALLLVVSIVALGASAISGPCHVVPLGLPEADLNKFQYCTCTDGVMISCDYTKFNPQGNPLLIKELTVLLNENMKQIGSGVFDPLVNLEILNFEDETMLIDTSGLATLPAGIFDKLVNLKSLSLANRKIVRLPAGVFTPKLAKLESLDLAVMTSLKSIHRGDLNLPALKTLDLSYCSLSLEPGAFDLLPKLEKIDFFYGDVGQYLPSGIFDKNPRLNSTGLATLKGLKGARTTLGCDSTWHCVSPTCNVIGGCFCDAGWTGDLCDKPCTNGAYGEDCRLQCATDCINSAGACTGASGCPCKSGYVGSRCDVSAQYGTESASSSSTNVGAIVGGVIGGIAGLALIAGGVFYWHRTRSGGKSRDGGSVTLNPLHA* # ORIGINAL: g11231.t1 original gene structure, not modified by PASA NODE_3347_length_3676_cov_38.7306 AUGUSTUS gene 193 1147 . - . ID=g11231;Name=g11231.t1 NODE_3347_length_3676_cov_38.7306 AUGUSTUS mRNA 193 1147 . - . ID=g11231.t1;Parent=g11231;Name=g11231.t1 NODE_3347_length_3676_cov_38.7306 AUGUSTUS exon 865 1147 . - . ID=g11231.t1.exon1;Parent=g11231.t1 NODE_3347_length_3676_cov_38.7306 AUGUSTUS CDS 865 1147 . - 0 ID=cds.g11231.t1;Parent=g11231.t1 NODE_3347_length_3676_cov_38.7306 AUGUSTUS exon 193 368 . - . ID=g11231.t1.exon2;Parent=g11231.t1 NODE_3347_length_3676_cov_38.7306 AUGUSTUS CDS 193 368 . - 2 ID=cds.g11231.t1;Parent=g11231.t1 #PROT g11231.t1 g11231 MSHGHSHGEGVPCQHGHGGSAPINRDDDNHHGHAHSHGSSSGGGGAHAHGEQPMSGTGGYSRPIDSQLVSAQPATGASASRPPNVFDPSKPYVRPVEPIEYAIIGQFREFLNYAQKETSLFAGLDSDGRSVLHWAALYGEIDVVKEIIAHGIP # PASA_UPDATE: g11232.t1, single gene model update, valid-1, status:[pasa:asmbl_5910,status:12], valid-1 NODE_3347_length_3676_cov_38.7306 . gene 2596 3541 . + . ID=g11232;Name=g11232.t1 NODE_3347_length_3676_cov_38.7306 . mRNA 2596 3541 . + . ID=g11232.t1;Parent=g11232;Name=g11232.t1 NODE_3347_length_3676_cov_38.7306 . five_prime_UTR 2596 2733 . + . ID=g11232.t1.utr5p1;Parent=g11232.t1 NODE_3347_length_3676_cov_38.7306 . exon 2596 3541 . + . ID=g11232.t1.exon1;Parent=g11232.t1 NODE_3347_length_3676_cov_38.7306 . CDS 2734 3541 . + 0 ID=cds.g11232.t1;Parent=g11232.t1;3_prime_partial=true #PROT g11232.t1 g11232 MRMVPMPMMRHSTVVAFLCLLICAACIGGVQSDTAATLGMAHGIVHFYSPPGLGRACVDYFPSWSLLPQKQGPPMHLVQSNPPQGCANITNLSDFAGKIAVIERGGCTFYDKIMAAQQAQATGVIIVDRNATRAIVGVTDASLYANCKIPVIGVTGDDSAVNFTYILAENGTVSFFAPHVPSFEPSFILMWLIAIGVICSASFWANYGERMGKRPRASDSDSVEEGEIVEEEIEGGEAPSVTVSAKTAIAFVLIACTVILSMYFLYKYL # PASA_UPDATE: g490.t1, single gene model update, valid-1, status:[pasa:asmbl_2452,status:12], valid-1 NODE_1724_length_9511_cov_60.4495 . gene 7892 9392 . + . ID=g490;Name=g490.t1 NODE_1724_length_9511_cov_60.4495 . mRNA 7892 9392 . + . ID=g490.t1;Parent=g490;Name=g490.t1 NODE_1724_length_9511_cov_60.4495 . exon 7892 8143 . + . ID=g490.t1.exon1;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . CDS 7892 8143 . + 0 ID=cds.g490.t1;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . exon 8376 8453 . + . ID=g490.t1.exon2;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . CDS 8376 8453 . + 0 ID=cds.g490.t1;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . exon 8803 9049 . + . ID=g490.t1.exon3;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . CDS 8803 9049 . + 0 ID=cds.g490.t1;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . exon 9190 9392 . + . ID=g490.t1.exon4;Parent=g490.t1 NODE_1724_length_9511_cov_60.4495 . CDS 9190 9392 . + 2 ID=cds.g490.t1;Parent=g490.t1 #PROT g490.t1 g490 MVSTLIGIVLQGSLLGFSRLSPHSKAFYVLMIVQGLVVITLQSVILGVGDWSSTSMGGLGADRKVYAVLFLIAVTYSVFFTWDALRAENIISVMALTFMDVLYVVYGATQVFQFQQKNSPVVPVNQTLANGTTVVVYVTMDDNDIGAVDILAIINTCLLCVFTLSCVYLTMKLYREFGWKVFKRIGADPRVAAMYRMYQVFVMFLKVDMPMLVIFLIMHCSVLLEADDVEFILSIIAIPLIIIMLYASYWAVSALVSHI* # ORIGINAL: g489.t1 original gene structure, not modified by PASA NODE_1724_length_9511_cov_60.4495 AUGUSTUS gene 4061 5702 . + . ID=g489;Name=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS mRNA 4061 5702 . + . ID=g489.t1;Parent=g489;Name=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 4061 4224 . + . ID=g489.t1.exon1;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 4061 4224 . + 0 ID=cds.g489.t1;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 4424 4475 . + . ID=g489.t1.exon2;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 4424 4475 . + 1 ID=cds.g489.t1;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 4603 4942 . + . ID=g489.t1.exon3;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 4603 4942 . + 0 ID=cds.g489.t1;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 5127 5336 . + . ID=g489.t1.exon4;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 5127 5336 . + 2 ID=cds.g489.t1;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 5485 5702 . + . ID=g489.t1.exon5;Parent=g489.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 5485 5702 . + 2 ID=cds.g489.t1;Parent=g489.t1 #PROT g489.t1 g489 MSRQQFPCAVLAIGAACAIRLALFAQTADADVYPDTSYCSPKDYKYGDSYWIYNWCRYTDSPRDSRWAAWSPIYFTGLTHTQNLGDRAIYNGYWSGTHTDTLRMEALQLDWAAAPQWNGIINDMSIQVTCHIQNTGDVTVGAGQLCGTRVQELRLEGIQVRLLGKHARKFWVDIICKDQRNSLMYRRNLYEGETAIEGNHFCGSRGRSVALAAVKIFIYPVTLPWEPLYTPGMVADSRILDANTFSWTYYRDHNADLLNAFGPTNTAAYNNHFLTYGIYEKRASHPTFNIGTYLAKNPSVKTEFAGDAVSSTLHYIYTGRAAGLAAI* # ORIGINAL: g488.t1 original gene structure, not modified by PASA NODE_1724_length_9511_cov_60.4495 AUGUSTUS gene 70 2297 . - . ID=g488;Name=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS mRNA 70 2297 . - . ID=g488.t1;Parent=g488;Name=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 1920 2297 . - . ID=g488.t1.exon1;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 1920 2297 . - 0 ID=cds.g488.t1;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 1125 1285 . - . ID=g488.t1.exon2;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 1125 1285 . - 0 ID=cds.g488.t1;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 618 652 . - . ID=g488.t1.exon3;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 618 652 . - 1 ID=cds.g488.t1;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS exon 70 191 . - . ID=g488.t1.exon4;Parent=g488.t1 NODE_1724_length_9511_cov_60.4495 AUGUSTUS CDS 70 191 . - 2 ID=cds.g488.t1;Parent=g488.t1 #PROT g488.t1 g488 MASTAPDAEPSTLTGLLESFVTQLNAELDIFRAGNNYDTASYESVLVEQTHALAQADARDGRTAVANNANASERPSGTPFYDTASEHWWQLFDASARSLAAETTKLAMFFSKPPYDAADVRPLLQNFSTAFSALCITTNESVRGRGKALYDHVIVSVSRTLNAACQFVASLVQTVIAGDGPRNNRNIVERTGVIWEYCETLYTLSRDNSAAVSAELGAVEGLLTDAISELEE # PASA_UPDATE: g10659.t1, single gene model update, valid-1, status:[pasa:asmbl_7951,status:12], valid-1 NODE_5234_length_958_cov_52.0657 . gene 1 958 . - . ID=g10659;Name=g10659.t1 NODE_5234_length_958_cov_52.0657 . mRNA 1 958 . - . ID=g10659.t1;Parent=g10659;Name=g10659.t1 NODE_5234_length_958_cov_52.0657 . five_prime_UTR 958 958 . - . ID=g10659.t1.utr5p1;Parent=g10659.t1 NODE_5234_length_958_cov_52.0657 . exon 1 958 . - . ID=g10659.t1.exon1;Parent=g10659.t1 NODE_5234_length_958_cov_52.0657 . CDS 1 957 . - 0 ID=cds.g10659.t1;Parent=g10659.t1;5_prime_partial=true;3_prime_partial=true #PROT g10659.t1 g10659 ITTEIDSCKTRLNANVASRRQWNNASRLNEPARTPPSGITVVTAFFVIKSKHSSDQYSEWFCNFRRSTRLNVYIFTDDAGMRIMQRCEVHGCIYIDVREDVWDVGNMTHYREDYENQLEIDPERGVVQHSPDLYAIWNAKILMLREVAAWNPFESETFLWVDMGSFRVQNTWFGPRWPDPVSYRALGVPKGNILVSLISHPLWESWSLGEELPLTGRCESSEYVQGGFFGGSSEALEWWSREFFAVHDHALRTGRFVGKDQRIMNAVATLNGDRVSVLNSAEAHRCGGDVWFVFQHALAAPEYRCDGCSIPPTRPFSSF # ORIGINAL: g7196.t1 original gene structure, not modified by PASA NODE_2801_length_5087_cov_40.986 AUGUSTUS gene 2705 4551 . + . ID=g7196;Name=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS mRNA 2705 4551 . + . ID=g7196.t1;Parent=g7196;Name=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 2705 3005 . + . ID=g7196.t1.exon1;Parent=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 2705 3005 . + 0 ID=cds.g7196.t1;Parent=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 3309 3562 . + . ID=g7196.t1.exon2;Parent=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 3309 3562 . + 2 ID=cds.g7196.t1;Parent=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 4093 4551 . + . ID=g7196.t1.exon3;Parent=g7196.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 4093 4551 . + 0 ID=cds.g7196.t1;Parent=g7196.t1 #PROT g7196.t1 g7196 MFGAYSSGGRGWVLWDFIISSYTGHMRDAVALTGNGLASMAPHVTHFFEGMGLNMAEMCSITPETALALVKTSAAMTPYPLDQEMKSARKMLEKMVGTSHASIKASNTLADVFASAVAATGDDSGEDIAGDLSFSAWRDFVAAMGWQITTGHLVLLGIQPPPPEDRFMIRDFREKVPPPKQRSIQEAEFVARLRQVVCTRQTAGQLITCGPLRAMLDRTVHMSGVRPVTFDSLSMAFAEGGLANVIYTQLLSFAETTAPKLCPRSPAMLGWSESVAAELKRWKRSNGGKVPPREVIVETMCEIGSARSDVGWEAASFAAGVAKENLFSFLTHMKERL* # ORIGINAL: g7195.t1 original gene structure, not modified by PASA NODE_2801_length_5087_cov_40.986 AUGUSTUS gene 308 2527 . + . ID=g7195;Name=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS mRNA 308 2527 . + . ID=g7195.t1;Parent=g7195;Name=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 308 1440 . + . ID=g7195.t1.exon1;Parent=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 308 1440 . + 0 ID=cds.g7195.t1;Parent=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 1569 1714 . + . ID=g7195.t1.exon2;Parent=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 1569 1714 . + 1 ID=cds.g7195.t1;Parent=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS exon 1884 2527 . + . ID=g7195.t1.exon3;Parent=g7195.t1 NODE_2801_length_5087_cov_40.986 AUGUSTUS CDS 1884 2527 . + 2 ID=cds.g7195.t1;Parent=g7195.t1 #PROT g7195.t1 g7195 KRRTTHDLRTSEAIRVEPNNHLLWGNRSAALFMLNSFSDSLADAQRATTLCPTYAKGYTRQGQCFAALGLKDEAVLAYRKSLDLKPLNPFVVDRMRDVIGLDSNFNDTGSYVPGEAIKSSTLPVDIAMGLGYAAVTVHARNAARKDRWLRTMNGRQLRAILKNGVACAGGMATWIPGAEKAFAEVFCDNVELYISSVYAIAHVKTLVTEVPLAELMKPSFLKAHPQHAPKMQAFHDILSLPRTLSTKGGIEGELLFERSLMTLTAAFEGEVDIQYNKRAEEKMRSTPGKTDDELFGSASSSGGVAGTPSAPSAAGTDRKGSQQPQQKSKSSTSRRARQHCQFCPKFDDAAFTGCVLDDGVRDGMMSTVRTLGDEGAFGDAAFRRALLQLSLDPAASAGAVPLSIVDRLATSAGDDPTHQNASLACIVIANLYAQEAYDVDVPDAISVALCLFLRSSKATPHVGRAVANIALSGLDNTRLIIRAGVLSAMNATLARLKVRPPIDPNAPANGLARELLRAIGAMASHPKCGDVISAIYDSGCVAHMISMNEQNHPAGAMTASARVALFHSNEVGDGAADPNALPQHQDASMDTLYDLSASAPGRRTVDMGNPWGGHSALSAKEALGKCYLFRPDSKGGLGWK* # PASA_UPDATE: g430.t1, single gene model update, valid-1, status:[pasa:asmbl_6618,status:12], valid-1 NODE_382_length_25294_cov_41.6162 . gene 5681 9543 . - . ID=g430;Name=g430.t1 NODE_382_length_25294_cov_41.6162 . mRNA 5681 9543 . - . ID=g430.t1;Parent=g430;Name=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 9443 9543 . - . ID=g430.t1.exon1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 9443 9543 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 9083 9299 . - . ID=g430.t1.exon2;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 9083 9299 . - 1 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 8844 8981 . - . ID=g430.t1.exon3;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 8844 8981 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 8471 8605 . - . ID=g430.t1.exon4;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 8471 8605 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 8166 8248 . - . ID=g430.t1.exon5;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 8166 8248 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 7840 7981 . - . ID=g430.t1.exon6;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 7840 7981 . - 1 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 7401 7515 . - . ID=g430.t1.exon7;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 7401 7515 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 7086 7153 . - . ID=g430.t1.exon8;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 7086 7153 . - 2 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 6695 6877 . - . ID=g430.t1.exon9;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 6695 6877 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . exon 5681 6317 . - . ID=g430.t1.exon10;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . CDS 5928 6317 . - 0 ID=cds.g430.t1;Parent=g430.t1 NODE_382_length_25294_cov_41.6162 . three_prime_UTR 5681 5927 . - . ID=g430.t1.utr3p1;Parent=g430.t1 #PROT g430.t1 g430 MMRALGYPRLISMENFRNPNFKLVHEILIWLVQRYDPNAPLPTDIDTETDRVTFVKAVAQFMATRAHIKMNTKKLYSADGYAVKEMLKVTTVLYNAMRITEKMGEEEGGTTARMLDISGKVSDLKLSRQLASEITTRGAKLYDLLGREMELREARSMAIARPLEVDAIEKGVKESIMSISDQKQQIETMIANIASDEANLEAKIEKKRLDLERNQKRLNSLQSVRPAFMDEYEKLEVDLQKQYAFYLEKFRNLTYLEHQLDEHNRAEMDKLEKTESHLKRIQERLREENMKLMRGEEEDLLDDDYSRKPKGSSGPSKSYGTLDGGDDDDDDSDNLSGSVMSDADERPSKTRGATNAKAAVRSSGAAKGRAPASDDDEEIDIDEDEGEGDSELDQDDGGRRERIAKWNNAMSGPSASSSAHMSSENATMVAAGNAAIERRSGRGGDGDGSLRRRSSASSQQARGTVRDATWSAANARESSRATRESTIEAERSPRSTRNDDGSLEDPPFGEAPPASSHPWSYVR* # PASA_UPDATE: g431.t1, single gene model update, valid-1, status:[pasa:asmbl_6616,status:3], valid-1 NODE_382_length_25294_cov_41.6162 . gene 10546 18172 . + . ID=g431;Name=g431.t1 NODE_382_length_25294_cov_41.6162 . mRNA 10546 18172 . + . ID=g431.t1;Parent=g431;Name=g431.t1 NODE_382_length_25294_cov_41.6162 . five_prime_UTR 10546 10669 . + . ID=g431.t1.utr5p1;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . exon 10546 10751 . + . ID=g431.t1.exon1;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . CDS 10670 10751 . + 0 ID=cds.g431.t1;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . exon 10967 11144 . + . ID=g431.t1.exon2;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . CDS 10967 11144 . + 2 ID=cds.g431.t1;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . exon 11330 18172 . + . ID=g431.t1.exon3;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . CDS 11330 18065 . + 1 ID=cds.g431.t1;Parent=g431.t1 NODE_382_length_25294_cov_41.6162 . three_prime_UTR 18066 18172 . + . ID=g431.t1.utr3p1;Parent=g431.t1 #PROT g431.t1 g431 MATMMDTSDPAVADPQNMSVEEKLQEKARKWQQLQSKRYSEKRKFGYVEMQKEDMPPEHVRKIIRDHGDMTNKKFRHDKRVYLGALKYVPHAVLKLLENMPMPWEQVRDVKALYHVTGAITFVDEIPKVIEPVFLAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNILDVEPLEAIQLDLDPEEDASVKDWFYDNKPLSDSKFVNGPSYRFWHLNLPIRATLFRLANQLLSDISDQNYFYLFDLESFFTAKALNMAIPGGPKFEPLYRDLDAMNEDWNEFNDVNKIIIRQPVRTEYRIAFPYLYNSLPRSVHLTRYHHPTVQFIKTEDPDLPAFYFDPLINPISHRTALAGKYEEPTIDDDDEFQLPEGVDPFLSSSPLYTDNTANGIALLWSPRPFNLRSGQTRRALDVPLVKSWYREHVPPGQPVKVRVSYQKLLKCFVLNALHHRPPKALKKRYLFRTFKATKFFQSTTLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRMTKLIVDSHVQYRLGNVDAFQLADGLQYIFGHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGPVGKGPGCGFWAPSWRVWMFFLRGIVPLLERWLGNLLARQFEGRTSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIRQNKARAILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNTAHYQRERIKRGATVDKTVCKKNLGRLTRLFLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSKLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDVYSHLIPVYDIEPLEKITDAYLDQYLWFEGDKRRLFPGWIKPADTEPPPLLVYKWCQGINNLQEVWETAEGECNVMMEATFEKVHEKMDLTLLNRLLRLIVDHNIADYMTAKNNIVINYKDMNHTNSYGLIRGLQFASFITQYYGLVLDLLVLGLQRAAEMAGPPQLPNDFLTFQDVETEVRHPIRLYSRYIDRVHMMLRFTAEDARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIEWDNSFVSVYSKDNPNLLFDMCGFEVRILPRNRITAGEMTTRDGVWNLQNEATKERTAQAYLRVDDDSIEKFNNRIRQVLMASGSTTFTKIVNKWNTSLIGLMTYFREAVVNTQELLDLLVKCENKIQTRVKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDAGVTHFRSGMSHEEDQLIPNLYRYIPPWESEFIDSQRVWAEYALKRQEAMAQNRRLTLEDLQDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVMKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSKPSLLADTKDTMDSTTSQKYWLDVQLRWGDYDSHDVERYSRAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLYSAYGNWFPGMKPLIQQAMAKIMKANPALYVLRERVRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRGLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKASEPKMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNEKTKVLLKPDKTTITEAHHIWPTLGDEQWIAVEVALKDLILADYGKKNNVNVASLTQSEIRDVILGMEISAPSQQRQQIAEIEKQTKEQSQLTATTTKTTNVHGDEIIVATTTNYEAQTFSSKTEWRVRAISATNLHLRTQHIYVSSDDIKETGYTYILPKNLLKKFITISDLRTQIAGYLYGVSPPDNPQVKEIRAIVLVPQLGTHQTVTLPNQLPSHEYLKELEPLGWIHTQPNELPQLSPQDVTTHAKIMADNTPWDIEKTIVMTCSFTPGSCSLTSYRLTPSGYEWGRNNKDSGNNPHGYLPSHYERVQMVLSDRFLGFFMVPADGLWNYNFLGHRHQMNMRYDLQLAYPKEFYHEIHRPSHFLKFTDIEEEGYSNGADHEDAFA* # PASA_UPDATE: g429.t1, single gene model update, valid-1, status:[pasa:asmbl_6615,status:12], valid-1 NODE_382_length_25294_cov_41.6162 . gene 1310 5259 . + . ID=g429;Name=g429.t1 NODE_382_length_25294_cov_41.6162 . mRNA 1310 5259 . + . ID=g429.t1;Parent=g429;Name=g429.t1 NODE_382_length_25294_cov_41.6162 . five_prime_UTR 1310 1318 . + . ID=g429.t1.utr5p1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 1310 1369 . + . ID=g429.t1.exon1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 1319 1369 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 1567 1614 . + . ID=g429.t1.exon2;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 1567 1614 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 2007 2147 . + . ID=g429.t1.exon3;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 2007 2147 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 2386 2523 . + . ID=g429.t1.exon4;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 2386 2523 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 2977 3061 . + . ID=g429.t1.exon5;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 2977 3061 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 3227 3294 . + . ID=g429.t1.exon6;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 3227 3294 . + 2 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 3515 3695 . + . ID=g429.t1.exon7;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 3515 3695 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 4187 4278 . + . ID=g429.t1.exon8;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 4187 4278 . + 2 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 4645 4786 . + . ID=g429.t1.exon9;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 4645 4786 . + 0 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . exon 5047 5259 . + . ID=g429.t1.exon10;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . CDS 5047 5198 . + 2 ID=cds.g429.t1;Parent=g429.t1 NODE_382_length_25294_cov_41.6162 . three_prime_UTR 5199 5259 . + . ID=g429.t1.utr3p1;Parent=g429.t1 #PROT g429.t1 g429 MLSSLRTSLGRVAAASNISNVAARAFGSSAVMQDKQMTVRDALNSALEEEMRRDERVFILGEEVAQYDGAYKITRGLLDKFGPKRVIDTPITEMGFAGVAVGAAMAGLRPICEFMTFNFSMQAIDQVVNSAAKTFYMSAGQVPVPIVFRGPNGAAAGVAAQHSQCFAAWYSQIPGLKVLAPYSAEDARGLLKAGIRDGNPIVFLEHELLYGVSFPVSDEALSKDFVLPIGKAKIEREGKDVTVVSFSKAVGHCLDVATALEKEGISAEVINLRSIRPLDTETIVNSVKKTNRLVTVEGGFPQSGVGSEICARIMESEAFDFLDAPVVRVTGADVPMPYAKNLEALALPQDHNISRAIKRVLGVEK* # PASA_UPDATE: g432.t1, single gene model update, valid-1, status:[pasa:asmbl_6617,status:3], valid-1 NODE_382_length_25294_cov_41.6162 . gene 20284 25030 . + . ID=g432;Name=g432.t1 NODE_382_length_25294_cov_41.6162 . mRNA 20284 25030 . + . ID=g432.t1;Parent=g432;Name=g432.t1 NODE_382_length_25294_cov_41.6162 . five_prime_UTR 20284 20699 . + . ID=g432.t1.utr5p1;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . exon 20284 21603 . + . ID=g432.t1.exon1;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . CDS 20700 21603 . + 0 ID=cds.g432.t1;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . exon 22016 24269 . + . ID=g432.t1.exon2;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . CDS 22016 24269 . + 2 ID=cds.g432.t1;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . exon 24562 25030 . + . ID=g432.t1.exon3;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . CDS 24562 24745 . + 1 ID=cds.g432.t1;Parent=g432.t1 NODE_382_length_25294_cov_41.6162 . three_prime_UTR 24746 25030 . + . ID=g432.t1.utr3p1;Parent=g432.t1 #PROT g432.t1 g432 MVDEGGGGSASAACDCQRRADVDTAMGPTLEHAADCRREASEVVSSAKAVASIEDAPTLDDTMDPVRDAALAEETKPPTTTTSTTTTTTTTTTTTTTAGMHSAKHARDDEDSERDIAAPPAKKRATDMDSLTTHTADPPAAPVTNTATDTRLIRSESENPTDTRNEDSAASVESSAALVDGAGDVNSGIEGQSSLSAGADNKNISGVAASDARDLPALPLSAQLLQSYQGGGRAKVTQQELIRFMSQLSLNMRVQRFATNEVVFSVGDASSAMYFVRSGSVSLFAVDGKTLLDTMSPGSFFGEVGLLFGIPRVCSVRATKECELFVLHRDDFFLTLLEFPQVAGHIQTLGNERLKLRERFKSLAFLSIEDSSGGGAHAKDVKESTTGGNHAVTADGADKPDAMAAAASRTDFLSSTFLRELILATVANTPNRIESFDNICTRIAGVFPEIHQQHDWQVHVRSALRSNDCFVRSGDLWTTIVLHTKGLFADASMSSMGGHSRWPPVMLMPASQSQSQSQSQAQLVASRLVVASDAGDTHEKSKRITNATVASAAAKASKVGRRGTGVKILPAPTANAGVVSSGGGVGAMGGSSQSMQGAQLSPHQQPQQNTPSNVSPAPQQTQQQQQQQQQSQQHQLQQHHQHQQQQLQQHHQHQQLQQQQQQQQQHLHQQQHQQQQQQQQHYVHSQQQQQQQQQQHLQLVQQQAPLHPHGQYVGQTLSHTQGHALPTHPSHLSVRVPVQGDVQQQHQQHIQQQQYAPHIHGPSIAQQQQQQQQQQLLPQQAISPHHPLAMSPWSMHAPVLSGVLPPQQTPQPPPPQMAMLQQQAPMAMHSAHDAPMWPARPAVPGSAMTMAYPHADYRMQQHTMERPPLHFGPSTPLPLSHSQLQQHQQQLPLQHPPHTLAHHHPQHQQQQSQHEHMAPIMFDGGPQMHPGMHTAIVGPLPPQMQSHTTLPPPPQPPSTQSNEPQMREVSYSVARILAELSSGGSRQPEFKILLVEDNIIAQRAAGKIIRDSGFAYDLAANGKEALEKMETNNYGLVLMDCQMPTMDGYTATKYIRYYEGSTGGHTPVVALTAFAGPDVKSNCLASGMDDYMVKPMSKVALKDVVSRWARLRM* # ORIGINAL: g5950.t1 original gene structure, not modified by PASA NODE_1975_length_8253_cov_40.3233 AUGUSTUS gene 3888 7965 . + . ID=g5950;Name=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS mRNA 3888 7965 . + . ID=g5950.t1;Parent=g5950;Name=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 3888 7243 . + . ID=g5950.t1.exon1;Parent=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 3888 7243 . + 0 ID=cds.g5950.t1;Parent=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 7411 7693 . + . ID=g5950.t1.exon2;Parent=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 7411 7693 . + 1 ID=cds.g5950.t1;Parent=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 7900 7965 . + . ID=g5950.t1.exon3;Parent=g5950.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 7900 7965 . + 0 ID=cds.g5950.t1;Parent=g5950.t1 #PROT g5950.t1 g5950 MPTVTVHPSGDNSMESIVGDGDRLSLILTAGRSCISVAEERRYYGWDGVGNFRENHDVLSRTFATEGGDDVFDAIYNTVCRPVATTLTHTGERFNEAAAPVVAEASFVQDALSALMGLPSRSFVWVDDRMRFESNTPFRIGKGRGSVSCACAAETIACYATHFRRLELIAAFFSRGVSKGGLTLEAFASALHAHLHNCREIILAIPSVALRMRSEKTTKGHANTENSFRHSFSKPIAHHDAEVADNNIHILKHATSESDNGTSTSTPFGGRTWPSLPELLALCAPMGGQLRRLASICLCALPMAYDGAHGIPTMSPAVTSLAGGIPLEGIAEADPFAADTLAFLRGFPRGSALLSHIHACAEWADERDGQLLRSILAQACSPYLRFMNLWMHDGVIDDAHAEFSLVFSLDAAEARDERFWAAAYTRLGDISGTPTFMRNAWNAAFVCGKSLNLLRRHDPSHPYARLPMEPPPLALSLDVDECATANKVHSSHVASLNAMEMAYREARVEAERVELSVRVGVAAAERAKLRAAAKVKEDAERDEREAVVTRKRADLAELRRNMDDAATRKRDAIAREKSDDALLVRNVAGGGGTSLSLGNLMPGLTANEIAKATEEVRKEIESEYAALNSDADRATATAEWISARRRLDDGRVDRLIKSHEGVSGDSSTTIDGVSVHAGGGGDSGSPIVSFRAHRSGSGGNAGGLDVGTDRGDDAQNAASDDDLNTSGVDTFMRAIVGSNAVNAAAAVAAHDGGNDDHDTFDGEADKVDEDLLLSQESFPVHLGDVSVGGHASLDDVLPAVTGDGHTISLESVVYVTNPHSALDDVRGLRSDAVSELSGNAGHSASVANEDSVSTTGGDGGIEDDAHRVEGASGDGDLAVGGPSEMEIRVAQLQSQLDQRLRFPGEPGNAQYGNDVPTVLTCSGENSRLVPLSVLTMLSLAEPIETRCAVISSAVARVFTKDLNLEGLLYGLRQYMLMGAGDWADLLCTRLLGTALEHCVDVDPDALAFASGLADAMASAVAASSVCGDQRASLVSLSFDADAWRKRALHMEAQHQQQREGSSSLGRALALLSGVRVTCACGWPLNVVVNSASVDKYNRLFGFLFTLRNVTWALGDAWSRLDSSTDSYTTVKKEITQAQTTKGGKRKSSGRRLSLGGRLSIGGDLGATGEEAERARFANAVRHELEHFVNVMQGYVLHQVLDVSWKELVADLAKAKDIDELIKAHSQYLDKALFR* # ORIGINAL: g5949.t1 original gene structure, not modified by PASA NODE_1975_length_8253_cov_40.3233 AUGUSTUS gene 568 3201 . - . ID=g5949;Name=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS mRNA 568 3201 . - . ID=g5949.t1;Parent=g5949;Name=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 2761 3201 . - . ID=g5949.t1.exon1;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 2761 3201 . - 0 ID=cds.g5949.t1;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 2519 2665 . - . ID=g5949.t1.exon2;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 2519 2665 . - 0 ID=cds.g5949.t1;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 933 2330 . - . ID=g5949.t1.exon3;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 933 2330 . - 0 ID=cds.g5949.t1;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS exon 568 714 . - . ID=g5949.t1.exon4;Parent=g5949.t1 NODE_1975_length_8253_cov_40.3233 AUGUSTUS CDS 568 714 . - 0 ID=cds.g5949.t1;Parent=g5949.t1 #PROT g5949.t1 g5949 MATQVPKRRRISVSGSSTAAPHSKTADAGADNTGRWQEIQRQRALLPLFAAKQRLIEEVAKNDVLILVGETGSGKTTQIPQYLHDAGYTRKGGMIGCTQPRRVAALTVSRRVADEMAVKLGEEVGYSVRFDDCTSRKTRIKYMTDGMLLREAMTQGNSDLKGYSVIILDEAHERTLHTDVLFAIVKGIRKRRADLKVLVMSATLDADQFSAYFDNAPVVYVEGRHHNVEIMYTEMPQPDYLDAALVASLQIHRTEPLPGDILLFLTGQDEIESMERLLRDAMKRTLTPAGGQQHGGTIVGMGGEAHATNVDGYNTAGGAEEECAPLEICPIFAALPSQQQMKAFERPPAGTRKIVIATNIAETSITISGIRYVVDPGLVKARTYNPRTGMDALVVQPVSKAQARQRSGRAGREMDGTCYRLYTEHTFGTLDDATVPEIRRVGLSGVVLQLLALGITDVVNFDYMDRPDTEALVRAIDALLVLKAIDGEALRLTELGRRMSLFPLDPILARAILASCELGCAQEVLTIVAILSADAVFFSPNNKREAADAARRRFASADGDHVTYLSVYRGYRAAQRRNEEREWCMSNFVNGRTMRAAVDIRAQLKELCERLSLPIETCGNETGPIRKALLTGMFQNVAAIQADNTYKTILGGHVVAIHPSSVLFNRRPACLLFSELVHTTKKYMRDISVVDPAWLIDVAPTVFSQSQSKS* # ORIGINAL: g12465.t1 original gene structure, not modified by PASA NODE_1347_length_11868_cov_38.7106 AUGUSTUS gene 4393 5181 . - . ID=g12465;Name=g12465.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS mRNA 4393 5181 . - . ID=g12465.t1;Parent=g12465;Name=g12465.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 4393 5181 . - . ID=g12465.t1.exon1;Parent=g12465.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 4393 5181 . - 0 ID=cds.g12465.t1;Parent=g12465.t1 #PROT g12465.t1 g12465 MFADLFADAKRAYKESKHNTLKREGSAPRVNQSKASSKRPALHQHYLEELRAYLREHNLAPETSLRNSNFTIDEDRRIMGLIKEGKGWTEIGREFGKNGKAILERCAYSLDPRLHFGPFTAEEDAAILAHVREHGKGKWVALSVKMGYTCSSNVLRNRYADTLQPDIKKGSWSDDERRRLLEGIVKHWRTGLQWRVTWARGGLPMTINVLREKHSVVLMMWVPFGGSALPRMKTRASASQSSDTDAIGTKWRRMSREDVKAI* # ORIGINAL: g12463.t1 original gene structure, not modified by PASA NODE_1347_length_11868_cov_38.7106 AUGUSTUS gene 548 2177 . - . ID=g12463;Name=g12463.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS mRNA 548 2177 . - . ID=g12463.t1;Parent=g12463;Name=g12463.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 548 2177 . - . ID=g12463.t1.exon1;Parent=g12463.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 548 2177 . - 0 ID=cds.g12463.t1;Parent=g12463.t1 #PROT g12463.t1 g12463 MALHMAKAGDPVILIEDNDEDEDLFPLDMEQLDKLADDLERASLGSLEDADELTLPPEMSSDGMRIREMRAMDSQRSTLSSVFDIDSVQNDSEDGIQIYSDDRERRCESPRKRASSEELNPTDSATDANFGGAIRGTSGHIPHHGVLLRSSSGSGLLSVPSTAPPVASRTRTLSGRQASREDALVAALQHACNSVVLFYRTLDVGALRPAMFRLHGGLETREISVFDSDGSKIKIQSVGRDALKKHFQYFSDDAAPKTSTSPVSSPKHHISERATTVVELDGADTDAPALVVRLDGDTREPTAIVYKMRVIHSGAALPIVHRSEMIVPIVASGDDRAHFAIVWHGRDENGSVDLRRRTQMSRVVNDWVTCIGQEALSAMYPPSCGDGRLLLLQSLQCLLSLPADRDPPSPVALILSDRCLYTPDATKANGPRVPLIAAASTSSAGAGGLASSSTRTRARRGKSLKPRMYKSVSRRLFLQLLFNPALLQYMGGVGDPDNHVTVGGATVPVYTWTAACKNPGTCIHPHHCKIDPRVFIAFQVAEY # ORIGINAL: g12466.t1 original gene structure, not modified by PASA NODE_1347_length_11868_cov_38.7106 AUGUSTUS gene 6404 11233 . - . ID=g12466;Name=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS mRNA 6404 11233 . - . ID=g12466.t1;Parent=g12466;Name=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 11165 11233 . - . ID=g12466.t1.exon1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 11165 11233 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 10587 10733 . - . ID=g12466.t1.exon2;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 10587 10733 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 10128 10241 . - . ID=g12466.t1.exon3;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 10128 10241 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 9443 9621 . - . ID=g12466.t1.exon4;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 9443 9621 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 9112 9253 . - . ID=g12466.t1.exon5;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 9112 9253 . - 1 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 8472 8580 . - . ID=g12466.t1.exon6;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 8472 8580 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 8106 8208 . - . ID=g12466.t1.exon7;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 8106 8208 . - 2 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 7287 7680 . - . ID=g12466.t1.exon8;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 7287 7680 . - 1 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 6905 7036 . - . ID=g12466.t1.exon9;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 6905 7036 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 6404 6709 . - . ID=g12466.t1.exon10;Parent=g12466.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 6404 6709 . - 0 ID=cds.g12466.t1;Parent=g12466.t1 #PROT g12466.t1 g12466 MFVIRHYTSIAVYHRHVEFVMYQALAHHIGSDVWLHSVSLAVCVISYALLFIQQSPAMYYAYITFPIFFWCLILKRRFVLYDFFNYIRMKRASFSLIAHAVVYIVAIEILVLSFYRREVLSLGFAIVMVWPFFTRLRTTDMRTLISWAISCATTSIFLFVSPEEPDWRFVGLAGVLFICLALFSVSRPYFHRTAKYPHEASEATRARLRTHVITVFQLLLIGVSVIIVASTSNSLERKAGLPLLNQVFSWVVLGTSIFLPLASTHYYLSRLMAISLALAPPFLLLSVSFEGLFYLCLTSTLYFWFIIEHKLSPARERSLDVPPPQTPTSPGFSLSTSTVDRDFIQQQQQQQQQQQQQQQQQQQQQQQQQQQPSRRASSDGSLLMPFLSASSSMTGASLRRESRYVRYVIANDIRCALFFLFFVIVAFFGTGNIASLSSFNLASIYRFVTVFSPFVMGSLLVLKVAIPFLLVGCIFHAVNQTLHVPGPSLFFPVIVMTDVMALNFFFTVRDSGSWREIGTSISHFIVFGAINVILILLNSASRWMTGNLLIPSRKKLRKIHPHAQ* # ORIGINAL: g12464.t1 original gene structure, not modified by PASA NODE_1347_length_11868_cov_38.7106 AUGUSTUS gene 3926 4360 . - . ID=g12464;Name=g12464.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS mRNA 3926 4360 . - . ID=g12464.t1;Parent=g12464;Name=g12464.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS exon 3926 4360 . - . ID=g12464.t1.exon1;Parent=g12464.t1 NODE_1347_length_11868_cov_38.7106 AUGUSTUS CDS 3926 4360 . - 0 ID=cds.g12464.t1;Parent=g12464.t1 #PROT g12464.t1 g12464 MRVSFSPDVRASVRAVLRGDGEADSKLAAQFKDLDTAKGWVALELGMDDVSQVDWARVNGASGAERSAALEAMEKEIVPQVRAEEWKEGASAVWVPAWRWERPICAGRRAPSQTTRASSHSSLLLSRGRDRYNLIESPVVSAVA* # ORIGINAL: g3552.t1 original gene structure, not modified by PASA NODE_879_length_16322_cov_41.897 AUGUSTUS gene 5388 15889 . + . ID=g3552;Name=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS mRNA 5388 15889 . + . ID=g3552.t1;Parent=g3552;Name=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 5388 6001 . + . ID=g3552.t1.exon1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 5388 6001 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 6339 6579 . + . ID=g3552.t1.exon2;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 6339 6579 . + 1 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 6942 7061 . + . ID=g3552.t1.exon3;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 6942 7061 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 7302 7451 . + . ID=g3552.t1.exon4;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 7302 7451 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 7702 7861 . + . ID=g3552.t1.exon5;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 7702 7861 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 8166 8308 . + . ID=g3552.t1.exon6;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 8166 8308 . + 2 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 8651 8941 . + . ID=g3552.t1.exon7;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 8651 8941 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 9158 9337 . + . ID=g3552.t1.exon8;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 9158 9337 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 9632 9729 . + . ID=g3552.t1.exon9;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 9632 9729 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 10023 10164 . + . ID=g3552.t1.exon10;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 10023 10164 . + 1 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 10522 10692 . + . ID=g3552.t1.exon11;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 10522 10692 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 10984 11256 . + . ID=g3552.t1.exon12;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 10984 11256 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 11536 12114 . + . ID=g3552.t1.exon13;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 11536 12114 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 12391 12489 . + . ID=g3552.t1.exon14;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 12391 12489 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 12837 12901 . + . ID=g3552.t1.exon15;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 12837 12901 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 13224 14169 . + . ID=g3552.t1.exon16;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 13224 14169 . + 1 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 14406 14504 . + . ID=g3552.t1.exon17;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 14406 14504 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 14890 15040 . + . ID=g3552.t1.exon18;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 14890 15040 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 15422 15516 . + . ID=g3552.t1.exon19;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 15422 15516 . + 2 ID=cds.g3552.t1;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 15654 15889 . + . ID=g3552.t1.exon20;Parent=g3552.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 15654 15889 . + 0 ID=cds.g3552.t1;Parent=g3552.t1 #PROT g3552.t1 g3552 MDDSGGGRTRRSGVTAIAPTISIGRHDEVTAHALNEKDRTLETTSGLKDADARPRSQSAHAGTNATRSNSRGEADGALSSSLAEKDVRSSSSSSIGPSTDAAFRPRTASETPVVPPPRTSSLSSELGDLLKDETGDFTDAEPQVMIMREELEREKAELKRLVDEQGRSMSIPEVADQAKKVKSLKVGLAKFLLASRKELDWKQNGMELQLDVELPFQQVTKVQVNSGTSLADLLAIVCEKKDLGDPSNFTIVSAETTGRKRSSSIGKVVGNVGKLRAAKVIVTRKVPDLHDTLRKVDADRKLLAYERAVRCIRTHFLIARDAGDLEARGPPLRDAAQALLKDAFGVSTEQMHEVTSFVDGCGVALGWMELEHRLLHLLRGSERAQFVSDDDYTAWRLKEEKALCESMLCMRRAGTVTVTIFSVKDMRNEQLDTRGARCIVTVGDDKLETPTVRTSSNEFNWNQRFEFNVPGEDDDEVHVDVHLGGDKSAADDGFLGFISVPLRFVGEKGLFSSFQLQPRSSHEAAVTGRLALGVVYVPLMPFEPTKAVDSYLKHRHKQELMMKRKGMRRLAIRVHHVELATVESSAGYGFEPYCVANLGAENARTKSVRGKGGKAAFDEDMELVVDGDNAMFKIAVYNSSTMGQVGAFGLALTQIIQSESGRGPRTYSLELAGRVTCRLTVSLNYKSLVGDTSYLAKMGQEERTMDVTTAADDAARDRLGSMCRAGEWAFPVRVSVHGIRCTQVGGGAELSDGSLWTVSIMSEDETVLYSCEATARESSLEVTCSNASFTIPSPGMVLIVSLRSKMESDDAGRSLLGAWTISASASSGEGHVLTLLNADRAVVGHVTLMLSQWTSEFVKKMGFLERFVDNEWTRRYVALVTVAGRTTLYNFDMSACEKFIDQDGFEPESRERASSVTSAGSAGDKDNEEAEACEEEEELDEDDPDFLSKFLTRQAELQRKAMEKLKEKRPAVSFAVSSPSEAASMSRDTFESKQMHERRGRVGTMAASNDTEGFMSRKTLASKVIPGGRSWRRLYIVLRDCYLFVYESDDAKQKSIGYHDLRGSFCDKVEDYKGKPNVFRLTIQQGQTSVVAAKEEYLFQCSSAAELDRWMRRLRLAQRMNASASADDVSAADQSKRFKQRRRSLFTKKAASPAPVRRPVDRSLAITEVSEEESPPPTPKFQTVAKVEKKSSSTALAVPPLAKSASRASLLSRGSDVYTPSIDAVYLGPETTHAVSTSTASTLDPRDRRSDSVSSNTSDGSVIQRYAFTITCGPSRAGSMSRLAGSHRRMPSGQIEEEHRYTYAAESEAERDAWIGILGRLFSSEGAVRGGVSEPSSRTSSVSAVSAAAAVPLSIPSLSMSASSSSPVLSRSDSGNILKGEMEDRSIYGALLSDLTLRFPELPDYTSAFKTLFEAIIGRELESGGEARNWRACGEMSPEAGKILDRFISRYALDPIQASVLVFALLSRLFQFHPIEPSVILRSFERLEKAGHVRDGRKLTNVDSAVLGDALEALERFLERVLANYRTAFPHGKGGLGDTLRLLSMVLEHPAYRARRTRPPTLQSIVVSALDQNVRDTYLRFKEVTAPIASADSTKMSIDRLGEVIRLCHKELEEDAK # ORIGINAL: g3551.t1 original gene structure, not modified by PASA NODE_879_length_16322_cov_41.897 AUGUSTUS gene 58 4049 . - . ID=g3551;Name=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS mRNA 58 4049 . - . ID=g3551.t1;Parent=g3551;Name=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 1752 4049 . - . ID=g3551.t1.exon1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 1752 4049 . - 0 ID=cds.g3551.t1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 1461 1473 . - . ID=g3551.t1.exon2;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 1461 1473 . - 0 ID=cds.g3551.t1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 1236 1282 . - . ID=g3551.t1.exon3;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 1236 1282 . - 2 ID=cds.g3551.t1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 850 916 . - . ID=g3551.t1.exon4;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 850 916 . - 0 ID=cds.g3551.t1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 390 634 . - . ID=g3551.t1.exon5;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 390 634 . - 2 ID=cds.g3551.t1;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS exon 58 99 . - . ID=g3551.t1.exon6;Parent=g3551.t1 NODE_879_length_16322_cov_41.897 AUGUSTUS CDS 58 99 . - 0 ID=cds.g3551.t1;Parent=g3551.t1 #PROT g3551.t1 g3551 MLAQEETSLVQGKPDVLSDPQHSSADVDMDAQGEGSLQSTDATKIVSPDMVGDGEKSAIANSDESVVPVRDAQSSAADGGEGERKLREEYTRVIADLPSALQISRPALLMNRVIPLFSAEDLKELPIDAISTPTLNSGFSDAEVGKSWKDVDVTALISHAQTRAINGKNGVHSANGLLSATTEDVASGGDDSDTKRLDYEDMRLFGEYPMGDSVALVTCNHCGRAVTEHSFAEHMKTSHPPKLIVRLKTREDGGKADQPRTGIVGALQRGLSTPEKSVKIERSDSPSQASSEIGLKRKLSAMTDELLTPNKRQATGVGRPEQQLPQSQPPQPPPPFSPSLSGSGSASQFKLGAPPAVSMPAFTVEDPIMGEDDMDVDGDGSAKRVERVFVPDKFCGVLVNGVHCMRSLTCKSHSVTLKRAIPGRSRPFDDLLAAHIRRPKRSNTSESSAVANGGRDDADVSDADSVHSWDFEELSSGVVFEVQRPPGPLAMKHYGARPLGNNGVCFGRRLDKMRIIFAQYAQRASRPRQPMRRLTATGLPGGIAAGLGAQVGPGGKADAGGAVVGAGAGASGGAGTQPMTAAQKKAADAAARRAEAKKSAMARDLDKEKEASVTLAMNLALEKGGDGKAKSRTKPKGVAGAAKDKTVAGAKGKIKGAVGTVGAAGAVGAVGAVGADLNTGKGRGKGRAKGKVDVSSDDSGSEIDFEREFERVMELERAKAKAGQLLQQQPPSKTTPLQMTATAAAAAAARKKQLPPPKAGTQIPAQVFEAAANAKAKPKPKPKPQKSVSSAIITDALVRECMKPDSDFETPAPTGQHTGPFSVNSTLAHSPLAGLGMPAAHTPVGHSPMPPSNSAMNSRIHAPMPSLLGAGRGHVPRNAMKPPPQRQQPQPQQQVANSVLTLSS # ORIGINAL: g7121.t1 original gene structure, not modified by PASA NODE_1361_length_11765_cov_39.427 AUGUSTUS gene 9990 11414 . - . ID=g7121;Name=g7121.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS mRNA 9990 11414 . - . ID=g7121.t1;Parent=g7121;Name=g7121.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS exon 9990 11414 . - . ID=g7121.t1.exon1;Parent=g7121.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS CDS 9990 11414 . - 0 ID=cds.g7121.t1;Parent=g7121.t1 #PROT g7121.t1 g7121 MATESTNPLRIAVVGGGIGGLAFAHLMKIKCPNVIITIYERDESPNARAQGYSIGLLPEAIEQTLRPVAHQVPGLTKMLDDPRVIQRAFTTLDWKYRHLLSFKPTTTGSLVDRWGLRKCLTQNLDIRWNMRLVECIEREDGTGGNHIKLIFEDGTEETADFAVGADGANSRARRARLPDFVYEDTNVTFYAGSASLSSLKNPRMQSFVDGGLTRVLGRNGHSLLLLKYISHKNDDGTEDEVGSVRLLWALSHPGKRDDWRKLELGDLPDESTEMQGDDSANTAVVLQHAPPHLAKTEQERQQELSRAAFQSYVERARKHFEGSLAETVIAETPFEHILGVMQYYSTNPAYLKCVAADISSGRRHDVGRIVLLGDAAHAMTSHRGLGANSALFDAADLCDAFVAIGNGSGVPYRDALHVYEGKMFTRGHVNVAASLSNTRLIHAMGWRACVRDWVAWCIGWAIVAYSNAPRLPWR* # ORIGINAL: g7120.t1 original gene structure, not modified by PASA NODE_1361_length_11765_cov_39.427 AUGUSTUS gene 8178 8675 . + . ID=g7120;Name=g7120.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS mRNA 8178 8675 . + . ID=g7120.t1;Parent=g7120;Name=g7120.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS exon 8178 8675 . + . ID=g7120.t1.exon1;Parent=g7120.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS CDS 8178 8675 . + 0 ID=cds.g7120.t1;Parent=g7120.t1 #PROT g7120.t1 g7120 MGGTFKAMNDDSASRVPIGDVCGPHKLWTLVEHRVYGPVLKLMLEEVEAASVTAGKKVEDVWGWMQPIQLERLETMRTSIADNKYDAATYLNPAEAARIVLDLKTLHRAADAGALTYLESSDKRVVRFTSPLLVAMLKHGEADHGGWFTPFRRVCLALPILRSRH* # PASA_UPDATE: g7118.t1, single gene model update, valid-1, status:[pasa:asmbl_1329,status:12], valid-1 NODE_1361_length_11765_cov_39.427 . gene 343 6637 . - . ID=g7118;Name=g7118.t1 NODE_1361_length_11765_cov_39.427 . mRNA 343 6637 . - . ID=g7118.t1;Parent=g7118;Name=g7118.t1 NODE_1361_length_11765_cov_39.427 . five_prime_UTR 6576 6637 . - . ID=g7118.t1.utr5p1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 6571 6637 . - . ID=g7118.t1.exon1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 6571 6575 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 6295 6391 . - . ID=g7118.t1.exon2;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 6295 6391 . - 1 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 5529 5763 . - . ID=g7118.t1.exon3;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 5529 5763 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 5190 5276 . - . ID=g7118.t1.exon4;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 5190 5276 . - 2 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 4845 4932 . - . ID=g7118.t1.exon5;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 4845 4932 . - 2 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 4417 4495 . - . ID=g7118.t1.exon6;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 4417 4495 . - 1 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 4046 4133 . - . ID=g7118.t1.exon7;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 4046 4133 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 3638 3723 . - . ID=g7118.t1.exon8;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 3638 3723 . - 2 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 3329 3421 . - . ID=g7118.t1.exon9;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 3329 3421 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 2829 3059 . - . ID=g7118.t1.exon10;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 2829 3059 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 2603 2679 . - . ID=g7118.t1.exon11;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 2603 2679 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 2285 2411 . - . ID=g7118.t1.exon12;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 2285 2411 . - 1 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 1903 2040 . - . ID=g7118.t1.exon13;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 1903 2040 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 1551 1613 . - . ID=g7118.t1.exon14;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 1551 1613 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 1218 1280 . - . ID=g7118.t1.exon15;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 1218 1280 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 749 826 . - . ID=g7118.t1.exon16;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 749 826 . - 0 ID=cds.g7118.t1;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . exon 343 481 . - . ID=g7118.t1.exon17;Parent=g7118.t1 NODE_1361_length_11765_cov_39.427 . CDS 343 481 . - 0 ID=cds.g7118.t1;Parent=g7118.t1;3_prime_partial=true #PROT g7118.t1 g7118 MGDESSQSHPGMARRQSATDMGLLDLAWERQQQKTFTAWCNAQLQKTGTKVTSITEDFCDGKNLLKLLEIISGDKLPKAETGKLRLHKIQNINKALQFIRDKGVKLVGIGAEEICDGNLKLTLGMIWTIILRYQIQDITVEELSAKEGLLLWCQKKTKGYKNVNVQNFHMSFKDGLAFCALIHRHRPDLLDYDSLKKGPEDALHNLNLAFDIAEKHIGIPKLLDAEDIVGTPKPDERSIMTQVAAYYHAFASSQKSEVAARRIGKILDFAQENDRLIEEYESLVSDLLAWIQSTIARLDGAAISNTVAGVQEVLVAFRTYRKTDKPPRAEQKSTLEAQLSTLQTKLRANNRPAYVPAEGRLVADIDAAWKQLDAAEQRHDQLIRDQLIRLEKLELVASKFHQKADIHKSWTNGKDELLSSSDVGDSLASVIALKKQHDAFESDMAAHENRVLTVQALAKELEQEAYHSAEAILARRDEITSEWLRLQELSTDRKQKLIESEKRQIWLDELRLDFAKRAAAFNSWSETAIEDLTDTIKVWTEDELEKIRNEHAGFKSAIGGPQATLDELLALDDQLTSEGVTSNPYTTLSRA # ORIGINAL: g7119.t1 original gene structure, not modified by PASA NODE_1361_length_11765_cov_39.427 AUGUSTUS gene 7238 8092 . + . ID=g7119;Name=g7119.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS mRNA 7238 8092 . + . ID=g7119.t1;Parent=g7119;Name=g7119.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS exon 7238 8092 . + . ID=g7119.t1.exon1;Parent=g7119.t1 NODE_1361_length_11765_cov_39.427 AUGUSTUS CDS 7238 8092 . + 0 ID=cds.g7119.t1;Parent=g7119.t1 #PROT g7119.t1 g7119 MEQSFSQMHSSEPLLIDLATAHFVGRTARMPTASICGAQLKAAETVPESFLERLKDVHMSPTEEHPSLFLSEERTELATDYTRLIHSQCKRKLFGKSKGRLITGPKGTGKSSFLQTMVCVSASLIPNYLAVYADMNTTETSIELLVQSWERQNEGCTLVKQHDRDNIALVLTALRAEKWLALLFIDEYDTLYTNRSDNLVAQRALEQTNSLMNNTSGVILVGVSGSSTYLRDLCFGKHMKSDDDKSYPLYQGLKYNLNEQRTAVRYLGIIVTKRELADFIVEPD* # PASA_UPDATE: g6194.t1, single gene model update, valid-1, status:[pasa:asmbl_5004,status:12],[pasa:asmbl_5005,status:12],[pasa:asmbl_5006,status:12], valid-1 NODE_2788_length_5124_cov_37.6019 . gene 1146 4861 . - . ID=g6194;Name=g6194.t1 NODE_2788_length_5124_cov_37.6019 . mRNA 1146 4861 . - . ID=g6194.t1;Parent=g6194;Name=g6194.t1 NODE_2788_length_5124_cov_37.6019 . five_prime_UTR 4818 4861 . - . ID=g6194.t1.utr5p1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . exon 4744 4861 . - . ID=g6194.t1.exon1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . CDS 4744 4817 . - 0 ID=cds.g6194.t1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . exon 4467 4549 . - . ID=g6194.t1.exon2;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . CDS 4467 4549 . - 1 ID=cds.g6194.t1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . exon 3114 4329 . - . ID=g6194.t1.exon3;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . CDS 3114 4329 . - 2 ID=cds.g6194.t1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . exon 2945 2998 . - . ID=g6194.t1.exon4;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . CDS 2945 2998 . - 1 ID=cds.g6194.t1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . exon 1146 2537 . - . ID=g6194.t1.exon5;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . CDS 1502 2537 . - 1 ID=cds.g6194.t1;Parent=g6194.t1 NODE_2788_length_5124_cov_37.6019 . three_prime_UTR 1146 1501 . - . ID=g6194.t1.utr3p1;Parent=g6194.t1 #PROT g6194.t1 g6194 MYPCDKGQYQPLVGQTACQRCPEFSTTQSGGSTDFNSCICDDGLYMTSKSCNSCPVGNYCEANKAIPCDPRSIAPTGGALSCTQCLLENQVADDARVNCVCVSGYIIQSDGSCALAPPIDTNAVTSTAMSSAPLESSSMEPATEIPPPSTIVADAATTGDAIPTAPIPSGGVAATVTTVTAAVPVSDTGSAPASTSVVAPAGVTTAITTAPVARATASTVTTVRKVTTTTVAVARSVSTSIPPVAAGTSTATTVRAVAVTTASNVVSRATASATTTGGAVAPVKTTATTTATITTTTIPKPTAVTSATTSVGNFGPVTATARASSTVAAAAASTTKADAKPTSTSPTEDKKSPSIVPAATSTPSNAKASSLTPSRSPSSSATSSATGGGGGGAGIGADPVGADPNSGGNGGGASGSAGGGFPVAAIGAGIGGVAVIGAGAMAFFVIKRRRQDSLKRRSSLAPLSGFGADSADPAYGHVFPGLRGGPMVVGNPAFEAEGIYASTSDYARVGAHGGGDDGIYASAEEYTAPLVKGKGGKGMSAAPHDAENPYADPKNEGKRTQGGVYAQPQGDEYSAPNKGGLYSAPQAGGMYSAPQGGDAYSTPQKGGMYSAPQVGDAYSTPQKGDGGYSAPQQGGVYSAPQEESLYSQPEADVYSAPLKGASGDKAATGGAGYYARPQENPYAQGAYSSPQAAAALPPSIPASARPQSGRNLQSLAVNANPNFTAPSSSDSNADLYAAPQDGGRSQYEAPQDIRSRTESGYATPTRKAPTKPGRPGTPSQGANAASAYATPDAAYASPDGPYATPHARLGGSDSPNDSDA* # ORIGINAL: g6193.t1 original gene structure, not modified by PASA NODE_2788_length_5124_cov_37.6019 AUGUSTUS gene 304 622 . - . ID=g6193;Name=g6193.t1 NODE_2788_length_5124_cov_37.6019 AUGUSTUS mRNA 304 622 . - . ID=g6193.t1;Parent=g6193;Name=g6193.t1 NODE_2788_length_5124_cov_37.6019 AUGUSTUS exon 554 622 . - . ID=g6193.t1.exon1;Parent=g6193.t1 NODE_2788_length_5124_cov_37.6019 AUGUSTUS CDS 554 622 . - 0 ID=cds.g6193.t1;Parent=g6193.t1 NODE_2788_length_5124_cov_37.6019 AUGUSTUS exon 304 402 . - . ID=g6193.t1.exon2;Parent=g6193.t1 NODE_2788_length_5124_cov_37.6019 AUGUSTUS CDS 304 402 . - 0 ID=cds.g6193.t1;Parent=g6193.t1 #PROT g6193.t1 g6193 MPKRSASEDEDYDEAADAGSDNESGKKSPAKGKAKPAAKKPKQSEDDDEDAKDYFD # ORIGINAL: g4358.t1 original gene structure, not modified by PASA NODE_3896_length_2553_cov_36.8002 AUGUSTUS gene 113 2553 . - . ID=g4358;Name=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS mRNA 113 2553 . - . ID=g4358.t1;Parent=g4358;Name=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS exon 1613 2553 . - . ID=g4358.t1.exon1;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS CDS 1613 2553 . - 2 ID=cds.g4358.t1;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS exon 1213 1310 . - . ID=g4358.t1.exon2;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS CDS 1213 1310 . - 0 ID=cds.g4358.t1;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS exon 701 781 . - . ID=g4358.t1.exon3;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS CDS 701 781 . - 1 ID=cds.g4358.t1;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS exon 113 397 . - . ID=g4358.t1.exon4;Parent=g4358.t1 NODE_3896_length_2553_cov_36.8002 AUGUSTUS CDS 113 397 . - 1 ID=cds.g4358.t1;Parent=g4358.t1 #PROT g4358.t1 g4358 PHPTPASQPHPRSYVCDVNGWSFVKGDTAYYNECSKLLRQIAFDTVGASVTLRIEPKPASRLRAVIAVLRHGDRTPKQKIKLVTCHPVIVSLIHSGGRYHPGDANSPYSHKTQTPIIQEPQCSTTDTDASSAPHPSHLSVSSVTSDGACACDIELRSPQELDNLLLAVDAVLESIGRSPDDSMPMSPPTLTPPPLQSTSSSQTGDRQYEHTHDHEEGAHNSALDDSGASWDAPASLRMGVGAVPLTSAMSALSAIDSAANSYTVDRFVQLRSVLNRAYPSTKVQLKSRGDGGVQIVCKWGGELTHAGERQARQLGRQFRRRLFPVTESASMLGGKPAGPFLTNLKVYSSSEERVRRSAREFVHAMLTDAGVHVNTYSIKPDHAGSPPSSTFGSLSSLPTALEASSAGHSPAAIRKCPSSTGGAVEVTVIENDDSRVLLDDVDAARVHLNRTTEKIGELLTGTEPIGD # ORIGINAL: g9249.t1 original gene structure, not modified by PASA NODE_1971_length_8272_cov_44.7305 AUGUSTUS gene 1888 2394 . - . ID=g9249;Name=g9249.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS mRNA 1888 2394 . - . ID=g9249.t1;Parent=g9249;Name=g9249.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS exon 1888 2394 . - . ID=g9249.t1.exon1;Parent=g9249.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS CDS 1888 2394 . - 0 ID=cds.g9249.t1;Parent=g9249.t1 #PROT g9249.t1 g9249 MGGGSSKPKVGGASSKKKKSNPSANPPAATAGPDARAPPSASADKPTASPADSEAPLGGRTASTTASRKDKDDTLENLPVKSSPKLSPKASPKASAADDDSLTWDSKPTAARTSNDKTNEDVSADATKAKEEAADTPKKKASLPETAAKETSPVKAVESPKPKEDKVL* # ORIGINAL: g9250.t1 original gene structure, not modified by PASA NODE_1971_length_8272_cov_44.7305 AUGUSTUS gene 4895 6552 . - . ID=g9250;Name=g9250.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS mRNA 4895 6552 . - . ID=g9250.t1;Parent=g9250;Name=g9250.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS exon 5764 6552 . - . ID=g9250.t1.exon1;Parent=g9250.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS CDS 5764 6552 . - 0 ID=cds.g9250.t1;Parent=g9250.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS exon 4895 5230 . - . ID=g9250.t1.exon2;Parent=g9250.t1 NODE_1971_length_8272_cov_44.7305 AUGUSTUS CDS 4895 5230 . - 0 ID=cds.g9250.t1;Parent=g9250.t1 #PROT g9250.t1 g9250 MATPAATMTRTVFSVRRMRVALVVLSIAIMCVVVSGLLADVAVYDTADYHNHRRQVIASVPLPALVATASTVASERLMAQTDTHARGIPARQVHDSNAHFDSHLTADAARSSVQPAITAVPSRVDAYSRISIDSQRPSKSLASLSIADVSHPPTYPSTTNRVPVLHGHTASPVASAVAVSAPAERFLIADICQWGQSNQLLALTSAVNLARILGRSLVEPSLCTLTGPKTLTLSPLSKYFDMAALSRILSDCADLHGKAMPCRLRLACHLAVNQHTRASILRHWNAEWPGPDDFNSTSTVPPTRRFIRTNLREFSTNHSIYPGTEHNVVAAYWLFGMVLGTELSAGPMQVSDLMPHRRLLDIATAFIRLFTPWV* # ORIGINAL: g7735.t1 original gene structure, not modified by PASA NODE_2782_length_5136_cov_35.6264 AUGUSTUS gene 86 988 . + . ID=g7735;Name=g7735.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS mRNA 86 988 . + . ID=g7735.t1;Parent=g7735;Name=g7735.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS exon 86 988 . + . ID=g7735.t1.exon1;Parent=g7735.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS CDS 86 988 . + 0 ID=cds.g7735.t1;Parent=g7735.t1 #PROT g7735.t1 g7735 GETPLHLAAREGNVEVVRLLLSRFANRNLEDFQEKNPAAIATAHGHHEVLALLNDWTLATSATKGPNKLRSVRVDPTVGGQNGAGGVHSGGNASQMPQQAQQAHQGQHGQRHSQSPPSDRSPADHYYSLSNSNNSGINNGNNNNIGVYGVAYAPLPAAAAAASTRTSGASPSVHSEASRGESLSPPFSYTTQVSAYFSGSESSPASDSAYGMQSLPATHMTAPTKGNGSGNEYPAGGFLTPPSVAESLSPSSLYLSPSGASAPAYAHDVNINAGSVEDHAFESDFWNSILTDDALVGVDV* # ORIGINAL: g7736.t1 original gene structure, not modified by PASA NODE_2782_length_5136_cov_35.6264 AUGUSTUS gene 1865 4357 . - . ID=g7736;Name=g7736.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS mRNA 1865 4357 . - . ID=g7736.t1;Parent=g7736;Name=g7736.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS exon 1865 4357 . - . ID=g7736.t1.exon1;Parent=g7736.t1 NODE_2782_length_5136_cov_35.6264 AUGUSTUS CDS 1865 4357 . - 0 ID=cds.g7736.t1;Parent=g7736.t1 #PROT g7736.t1 g7736 MAPMSFISTAVSALLLMCSVWASVDATDADVKRLTTSALAICDPYGQAEPNIVTGSISGPTTVYVTSGVDGSKLASCVLSSHFGSGEVQSLACGDFYSVGFQHIAVHVAGSGILAVIDAHNCNITALVTVDTAVNGTLGNVNIAAGDVDGDGQFELVAASGVGALSASVGVYNISMGVLKYPLFAAFPVASFGENGVSLAVGDANGDGQDEIIAAQIGTNPHVRVIQYTGDASLPFNVTLDINSFEFVYPFSDGGIRVSISSAPPKSSSAVLVVPYAPMGQTKIYAAMLPNSLNGVTSIVDITSPPIASALSASNVNVGLVIAGSMMTYPAPANPSGGLVQINPPCVVAYIAAADAASTLVVSGSIPAAFKATIFASASGMSAANNASSVTTSTWSPVVQTPFFAFPARNYVSPYYVEFSFSNLTLDFSDGARGNQSRWAADPESEWYLESNMGRYTGWGPHPAVFPPLTESELQSPQWMRERYVASIYNLVGKADYQHHHVPVWVPSSDVWVWDQVSAGAHMAGLDCSDLTAWGWNWGFGLTLTAQTANQSYLPGVIAPWNGLEIQFETVQMDQSNYTDVVRSLQTGDMVYVKGCPTCAVSHVVSWLGSTGKCGPRVQGACPPLVLDSYGDGIVDSAGITVPNGPHLRPFLSDSWYFSSMSHVVRVVQATGFVYTAPPTPSSSANTGASTSDTPLPLSATATNVISATSKDPPATTSAATAGMASTVTMDTVASTLDATASTKSSELSRSTVTGVSVASTTSQKTSDIPVVTPSTTTTPAPLARSSSSGLSGGAVAGIVVGVCAGAILAGVAVYVAFGRRKSVTRGIEV* # PASA_UPDATE: g13106.t1, single gene model update, valid-1, status:[pasa:asmbl_8509,status:12], valid-1 NODE_619_length_20090_cov_40.9376 . gene 7132 9764 . - . ID=g13106;Name=g13106.t1 NODE_619_length_20090_cov_40.9376 . mRNA 7132 9764 . - . ID=g13106.t1;Parent=g13106;Name=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 9699 9764 . - . ID=g13106.t1.exon1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 9699 9764 . - 0 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 9340 9456 . - . ID=g13106.t1.exon2;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 9340 9456 . - 0 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 8839 9009 . - . ID=g13106.t1.exon3;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 8839 9009 . - 0 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 8651 8697 . - . ID=g13106.t1.exon4;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 8651 8697 . - 0 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 8232 8341 . - . ID=g13106.t1.exon5;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 8232 8341 . - 1 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 7942 8066 . - . ID=g13106.t1.exon6;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 7942 8066 . - 2 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . exon 7132 7717 . - . ID=g13106.t1.exon7;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . CDS 7568 7717 . - 0 ID=cds.g13106.t1;Parent=g13106.t1 NODE_619_length_20090_cov_40.9376 . three_prime_UTR 7132 7567 . - . ID=g13106.t1.utr3p1;Parent=g13106.t1 #PROT g13106.t1 g13106 MAAKFHVGVAQDRNSRYRRTMEDVHKYYIDFAGVKDMGLFFVLDGHGGKQAAEFCGKAVPEIFEGILKEAPSIDMIEALTKTFETADVKLKEAEILYSGAASVVVVVRNETDEAGNTKRVIYAANAGDARAVLYRNGCAHRLTYDHRTSDEAETRRIQDKGGFIIGSRVNGILAVSRALGDVAMKDFIIGTPYTSRSELEPSDKHVIIACDGVWDILTDQNASDFLTRNEGNPQLASEQIIKHCLENGSTDNVTCMVVELY* # ORIGINAL: g13107.t1 original gene structure, not modified by PASA NODE_619_length_20090_cov_40.9376 AUGUSTUS gene 10843 12973 . + . ID=g13107;Name=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS mRNA 10843 12973 . + . ID=g13107.t1;Parent=g13107;Name=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 10843 10930 . + . ID=g13107.t1.exon1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 10843 10930 . + 0 ID=cds.g13107.t1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 11055 11137 . + . ID=g13107.t1.exon2;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 11055 11137 . + 2 ID=cds.g13107.t1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 11568 11721 . + . ID=g13107.t1.exon3;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 11568 11721 . + 0 ID=cds.g13107.t1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 12000 12370 . + . ID=g13107.t1.exon4;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 12000 12370 . + 2 ID=cds.g13107.t1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 12500 12548 . + . ID=g13107.t1.exon5;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 12500 12548 . + 0 ID=cds.g13107.t1;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 12894 12973 . + . ID=g13107.t1.exon6;Parent=g13107.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 12894 12973 . + 2 ID=cds.g13107.t1;Parent=g13107.t1 #PROT g13107.t1 g13107 MAGLEYVVIHSVDPVLYCIRKQKRTSQIKVLHLAIYYVLDGTVYQAPDLYSVLNNRLLTCMHHMQESMDIMRSRARFHPSKGYYWSTGKEAAASGADGGSAEDVPGSEEPPSFQVTSAALEPKHVDTLLNELYRRFPPQLQPPQPPPPQQQPQQQQQLASLTTHSPATGPLGGDLRSSSTASLAPSAPQSASQSAAPSTATSPARQVPGVAAQMKKPVRALSVQSAIGTAKTSVPSPLGRPTAPSPARGAVASPNNRKRPLEDESSSTTAKRRK* # ORIGINAL: g13104.t1 original gene structure, not modified by PASA NODE_619_length_20090_cov_40.9376 AUGUSTUS gene 1344 3813 . - . ID=g13104;Name=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS mRNA 1344 3813 . - . ID=g13104.t1;Parent=g13104;Name=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 3225 3813 . - . ID=g13104.t1.exon1;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 3225 3813 . - 0 ID=cds.g13104.t1;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 2531 3049 . - . ID=g13104.t1.exon2;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 2531 3049 . - 2 ID=cds.g13104.t1;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 1805 2323 . - . ID=g13104.t1.exon3;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 1805 2323 . - 2 ID=cds.g13104.t1;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 1344 1555 . - . ID=g13104.t1.exon4;Parent=g13104.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 1344 1555 . - 2 ID=cds.g13104.t1;Parent=g13104.t1 #PROT g13104.t1 g13104 MAIARLSMLFAALCLAAAVGLSAGANPSPTGIPGICHLTANRYLQVTGLDSNVGCVQRIDNYQSQQPQGGVVQFPNVNNLQNNQYVELYLNYQDQTSCSGFIGVVFCTQSEESAIPLSATSANPATTSNVVVSATTGGAVVVPSSSSAPESQSSAIASPSTVPQQPPVYDIVFTAGNCSTTICDCPSGWIRVNCSSVIAPSSSAAGSSTQQSVFSSSFSTFPASSSAALDASASASASASASESASINTSGSASASASPSSSVIAVSDLRGICSVNGTVSNRCVCARMWKQENCTTSTGNGLVTPPTTNCTTAGADREVKCPRKELNATQLDTLANPNWVHRLRDDVCDTTPDECVCAMRFEPLVCPVYPPLYFLLPSAAPSASASASATATAVFSGVYPDGMQVVASYVLAANGSYTWQYDNCTGVTPIARCVAAGEPVNDGWRHVFVKGKCVNIPAGSSSSAFASASSSFAGDSSSIFVSASGVGASASASSAFASASASASASGSASASASVSPSFVPRRTFCQCPAGFARVNCTTPNAPPKPVVSSSTIPRSTSASSAAPAQSTAAPESTQITNPTETVQSFNAGASYSPAAAAVGALVIGVAALLLH* # ORIGINAL: g13105.t1 original gene structure, not modified by PASA NODE_619_length_20090_cov_40.9376 AUGUSTUS gene 5304 6470 . - . ID=g13105;Name=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS mRNA 5304 6470 . - . ID=g13105.t1;Parent=g13105;Name=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 6324 6470 . - . ID=g13105.t1.exon1;Parent=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 6324 6470 . - 0 ID=cds.g13105.t1;Parent=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 5953 6023 . - . ID=g13105.t1.exon2;Parent=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 5953 6023 . - 0 ID=cds.g13105.t1;Parent=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 5304 5757 . - . ID=g13105.t1.exon3;Parent=g13105.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 5304 5757 . - 1 ID=cds.g13105.t1;Parent=g13105.t1 #PROT g13105.t1 g13105 MLPTPDLSHLKSRDYDVVYEPAEDTFLFLDALEKDAEQLTAMKPAICVEIGSGAGAVLTFLAKIIGPTAALYLATDINPHATKATVGTGKQNGVSIDAINCYFASPLVPMLENRVDILLFNPPYVVTPSDEVGGDGVMAAWAGGDKGREVTDKFLFGDVNSSQRATVDALLSERGFAYVVLIEENDPEEIIALMKRLGFDGVTVMARKAGRERLSVVRFHRSR* # ORIGINAL: g13109.t1 original gene structure, not modified by PASA NODE_619_length_20090_cov_40.9376 AUGUSTUS gene 18579 19868 . + . ID=g13109;Name=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS mRNA 18579 19868 . + . ID=g13109.t1;Parent=g13109;Name=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 18579 18654 . + . ID=g13109.t1.exon1;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 18579 18654 . + 0 ID=cds.g13109.t1;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 18770 18837 . + . ID=g13109.t1.exon2;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 18770 18837 . + 2 ID=cds.g13109.t1;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 19148 19294 . + . ID=g13109.t1.exon3;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 19148 19294 . + 0 ID=cds.g13109.t1;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 19421 19480 . + . ID=g13109.t1.exon4;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 19421 19480 . + 0 ID=cds.g13109.t1;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 19599 19868 . + . ID=g13109.t1.exon5;Parent=g13109.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 19599 19868 . + 0 ID=cds.g13109.t1;Parent=g13109.t1 #PROT g13109.t1 g13109 MAKPLEESDVKSFVDSVDAFLFDCDGVLWHGPHLIPGAKELLEQLRKAEEIVGSAFVAADYLKNVARIGADKKVFVIGESGICDELDEVGLRWCGGTQPPLATGHGLDAVSVKEDPDVAAVVIGMDTSFSYAKLANGFHYLQANKGCIFVATNEDSTYPGPAGSMFPGTGCLVAAMETAYGRPAIVMGKPHPPMLETIIRRFAHIT* # PASA_UPDATE: g13108.t1, single gene model update, valid-1, status:[pasa:asmbl_8510,status:3], valid-1 NODE_619_length_20090_cov_40.9376 . gene 13174 18268 . - . ID=g13108;Name=g13108.t1 NODE_619_length_20090_cov_40.9376 . mRNA 13174 18268 . - . ID=g13108.t1;Parent=g13108;Name=g13108.t1 NODE_619_length_20090_cov_40.9376 . five_prime_UTR 18062 18268 . - . ID=g13108.t1.utr5p1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 17477 18268 . - . ID=g13108.t1.exon1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 17477 18061 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 17133 17258 . - . ID=g13108.t1.exon2;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 17133 17258 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 16587 16823 . - . ID=g13108.t1.exon3;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 16587 16823 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 16214 16330 . - . ID=g13108.t1.exon4;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 16214 16330 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 15815 16033 . - . ID=g13108.t1.exon5;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 15815 16033 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 15252 15446 . - . ID=g13108.t1.exon6;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 15252 15446 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 14192 15022 . - . ID=g13108.t1.exon7;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 14192 15022 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . exon 13174 13955 . - . ID=g13108.t1.exon8;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . CDS 13434 13955 . - 0 ID=cds.g13108.t1;Parent=g13108.t1 NODE_619_length_20090_cov_40.9376 . three_prime_UTR 13174 13433 . - . ID=g13108.t1.utr3p1;Parent=g13108.t1 #PROT g13108.t1 g13108 MPSQISGSRSNGLNELGDDEPSLAVGLRTPAKSVTNGSVNSLHAADNASQRATSKENLLSNGNAGATVTFEDNVADAAPAEGASASSRPMSRASLAPSGGAGSDKDDSGENFGSSESLLLEAEDLRDQIDAAITRSRPVSGKREAQKLIPESYKSNSYKEELALAFVENFRRQFVQLYPDRKPLLLCPPNENGIEKFVCTTLRPTLLPYKELYDYDGCASFVADYLVYEPLANPTELPDKIVSPTSTLERHVGNCFDFSLVLCSLLLGAGYDAYCVCGYAAREITLMDQSRVICPLLVTSAPPPVEHVKEADCSYQVKPPRELKSRFIQKYDAKQKLLAEAAEKKRKEDEEAAKAERNKPKADVLHGLRVHSWVLVLAGKREVPEAFFIEPSTGKIYPTNHNQYLGIECVWTSSNYWVNMQDCSEGVGNMAYELGDTSRWEYIFPENTKPLTNVPKATEDDDAPTSPPLSPEPEDDENDAILDLPPSWVSRILVNANEYQSRCPGGKKTLLYKGAKLEKFAEYVREDGLVARLTIYKEDSNNEVGEIRETYANRKDRLIERSRIVPKGLITETFAPGRVHCLRQHIYYEHGKGDGSMTMHFYSNARLDGLVTRHDTGRKLTETFVNTDDNLTYRSATFDLPTLISGAGPAKHRAGPANPVNEDRPVRKMTEKFALRSEAPAGDQVHKRTFFVGEDNIRLTFHLEADRIIASTRDYVKPQGEKATGLEDITQFHALKPSKPPKRIQLWEELQDLLHAETACMSLIRESEKQVRDILALRKKEEASVQLTVSFYDTARNKSIRSHRAEIETKKTEEDSTAADLDYLAPFLARLDRPNKLTTEDAQRVREECLKDLKQRLIDKANLIQSRFEEETAELQRRQAWYAQNQNTIDKDEEEEYVAFCNDAMFRVHILEQRLATHKESAPQKYIKLDGRLRGDQRLAHLL* # ORIGINAL: g13103.t1 original gene structure, not modified by PASA NODE_619_length_20090_cov_40.9376 AUGUSTUS gene 68 707 . + . ID=g13103;Name=g13103.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS mRNA 68 707 . + . ID=g13103.t1;Parent=g13103;Name=g13103.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 68 208 . + . ID=g13103.t1.exon1;Parent=g13103.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 68 208 . + 0 ID=cds.g13103.t1;Parent=g13103.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS exon 513 707 . + . ID=g13103.t1.exon2;Parent=g13103.t1 NODE_619_length_20090_cov_40.9376 AUGUSTUS CDS 513 707 . + 0 ID=cds.g13103.t1;Parent=g13103.t1 #PROT g13103.t1 g13103 LQLAESKAATFLSECRTLTQRIKGVDVERTRAEKECENLSREVSRLQDALVTTERNYESQMAVMADHIAGLNERLSAQRDRMDRHGMPANGKQGEAAGRTATPQKVAGGRR* # PASA_UPDATE: g1207.t1, single gene model update, valid-1, status:[pasa:asmbl_4926,status:12], valid-1 NODE_2748_length_5246_cov_40.1626 . gene 1035 4922 . + . ID=g1207;Name=g1207.t1 NODE_2748_length_5246_cov_40.1626 . mRNA 1035 4922 . + . ID=g1207.t1;Parent=g1207;Name=g1207.t1 NODE_2748_length_5246_cov_40.1626 . exon 1035 4922 . + . ID=g1207.t1.exon1;Parent=g1207.t1 NODE_2748_length_5246_cov_40.1626 . CDS 1035 4922 . + 0 ID=cds.g1207.t1;Parent=g1207.t1 #PROT g1207.t1 g1207 MSSAAGGRRGGGSPGVKLAGSAAGSEFGEMESVSSNSIFTATKLKDKLKKGIFGILFVLVKDTRHSIVYIFFELFTDFFQVLGFAFSPSVDFPWNGPQTLWLQKALKVFSPEKYVIGESGWFYAVISLVFFALAISLFVAYSFFKNRYRALFLLRILRQFGEMLTTILLMPFLGIMAGMIPCHEGEDCGSIEKTIHRILACVFGVLFFFFSLVVTSCYYEQNPTRKTLLSRPHAHFDVFYLVVRAFLAVIYEILYRNQYHWVLISLNAIGMVSSAALFTFLIPYHNEMINKVRMVFTWLCAFASLCLIVAKITDDPSASQASLFFYLMAPVVAALSVFVYTWRKNLALQMRVKQCQSVYEVEVRVRLLLDSKKLLRKSFSNPSVQGETVSVTREINGFYAEAAKRFPESPLIHIFWGQFYLHHMERRNLALTEFVKAGDKHPTFDVQFLLFRQRQLLTEDVTFNKNNMDAMAFVAYEKNLQEAKKYERKATRLQALFWKELSEDKPNRKVLYEYGVEVSDSITRGRRSFIKLIEASGTSPQLLRMYAGFLLYVARDARTSDALLSQADALETQQSEIRRREALSQQKSDAMTSYTDSTSATVTVSADLERVGEIVDVSGSACKFFGCRKSEMVGQNITCLMPPPFSLVHNDIMTAYIEGGADENSVIRLQRVVLARHKSGNILPVRLVIRQYYREPHGVVLIGQFSPINLEGAHRILIDKDGDIISHTANIGVAFGGHQDENFRGHSLSTVLPGYAHSPQVGAEPFVTVVRQLVNQTVVEFKAEVEWLSLHDIMYGVVALTSRPIDMAPDDGGHLHEGGASEDADDAMLMSVGLGHIVQPQLEADGPTVDSNGGQRIRSATGGAFGSLRGGSRGLGSVMSDSGMGLGGRDASRDEPLLEKVLKKNVSVRFVDEDDKPESEVDGERRGSEMSTVGAEEVIEPDAIQMKIINQKRLNSFESNRSSPKPKLAPGMPVGAYAFSAASDNEESVAPADALEREGSVSSARSTASASKIAKFVSARNKKMIIEPVLYRGFMFVMCGAFLIATTISVLNLTNSTNSFKESITCVIASSHLREDSVVGSLQARTLSLMAEGLMQNTSTQEERREDLIELQEEMLDATSELYFQGKCITEDIRQYYKTLLPFTVFPTGNFSDPLVTYMTLVQATQTFASDAVDLSNRTFDEMLQDAPDGLFLISNGVGNYLKAADAATTLYVHAVEDAADALKRQSESVSWPPFAILTSVLIAIVIPILYKVDRRMSVVLNLFLSIPKSMVQHRARTMTKRLESLDEEDSDDVS* # PASA_UPDATE: g2770.t1, single gene model update, valid-1, status:[pasa:asmbl_7501,status:12], valid-1 NODE_4651_length_1372_cov_51.0925_potentialcontaminant . gene 763 1346 . - . ID=g2770;Name=g2770.t1 NODE_4651_length_1372_cov_51.0925_potentialcontaminant . mRNA 763 1346 . - . ID=g2770.t1;Parent=g2770;Name=g2770.t1 NODE_4651_length_1372_cov_51.0925_potentialcontaminant . exon 763 1346 . - . ID=g2770.t1.exon1;Parent=g2770.t1 NODE_4651_length_1372_cov_51.0925_potentialcontaminant . CDS 795 1346 . - 0 ID=cds.g2770.t1;Parent=g2770.t1 NODE_4651_length_1372_cov_51.0925_potentialcontaminant . three_prime_UTR 763 794 . - . ID=g2770.t1.utr3p1;Parent=g2770.t1 #PROT g2770.t1 g2770 MTVTSQVRYLMQPVDEMILKNTLAGLSSLAAECYLKFFIPKMRTALEYRTYTPVFVYHENPGMLAGNNTVHYNAPGGFLGSEAAMIGLRDAVRRSPIGFADFDFNQFRDLLLHRETQRSDNLVVHISNADDKHFPYIPNIEGVLAETSIWLRHIAKPSKVFVVSTNGVYMASREGWTFDTNIY* # PASA_UPDATE: g5952.t1, single gene model update, valid-1, status:[pasa:asmbl_4066,status:12], valid-1 NODE_2337_length_6660_cov_26.3897 . gene 2 669 . + . ID=g5952;Name=g5952.t1 NODE_2337_length_6660_cov_26.3897 . mRNA 2 669 . + . ID=g5952.t1;Parent=g5952;Name=g5952.t1 NODE_2337_length_6660_cov_26.3897 . five_prime_UTR 2 3 . + . ID=g5952.t1.utr5p1;Parent=g5952.t1 NODE_2337_length_6660_cov_26.3897 . exon 2 45 . + . ID=g5952.t1.exon1;Parent=g5952.t1 NODE_2337_length_6660_cov_26.3897 . CDS 4 45 . + 0 ID=cds.g5952.t1;Parent=g5952.t1;5_prime_partial=true NODE_2337_length_6660_cov_26.3897 . exon 327 669 . + . ID=g5952.t1.exon2;Parent=g5952.t1 NODE_2337_length_6660_cov_26.3897 . CDS 327 575 . + 0 ID=cds.g5952.t1;Parent=g5952.t1 NODE_2337_length_6660_cov_26.3897 . three_prime_UTR 576 669 . + . ID=g5952.t1.utr3p1;Parent=g5952.t1 #PROT g5952.t1 g5952 ASLVHADAAPKKGEVIYGNYNDARGDDEVYSTPRPDDEYYAVPALKPVSELQYAQISFGKPKGELNYASLEMTTQAVSRAPAGSGSGPIYANTRDV* # ORIGINAL: g5953.t1 original gene structure, not modified by PASA NODE_2337_length_6660_cov_26.3897 AUGUSTUS gene 1300 3441 . + . ID=g5953;Name=g5953.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS mRNA 1300 3441 . + . ID=g5953.t1;Parent=g5953;Name=g5953.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 1300 2844 . + . ID=g5953.t1.exon1;Parent=g5953.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 1300 2844 . + 0 ID=cds.g5953.t1;Parent=g5953.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 2980 3441 . + . ID=g5953.t1.exon2;Parent=g5953.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 2980 3441 . + 0 ID=cds.g5953.t1;Parent=g5953.t1 #PROT g5953.t1 g5953 MARTFRVLCILLLVTMSCGVTSVQQYNLTIWTVFGANDEGYTSGTLSFKLYGSTTTAGPYSVPSGITSRTVSLTAPSTAPYVGTLLRIGIVPNADSWQPERITVTYGTESYDFKFSSVDALVDTSASPKEVFVCAIPQAPDNGAFSCPSTYASSGASRNYCSLRCDSGYSASSTTQAACSSATGFAGFQGYSNRLASCNPNCNPPISGECAYINRQSCRIPNVCGPCLNSYGVKSDLIASTSDSNIECTDFTTIYKIMLVMSYATGAGTDLPCTATLLGSNGKSDANTYLNPVSFFGNIQSLSGGTTYMATISSTFFGFELLRGLRIACVFNDNNPGVTNWWLPSYIEIDSDNAGLPAPVRYNFLTSDRLDVGTYTLFAPPTDYPPHGSISCTSSMPGRTCSVTCDSGYLPSTGVTLPSGTSPPFSTVGIARAACYPDCGARNSSYCAGLNRLPCGDVPNKCGACMPGYNTSTPSAPTAGDSPCARYINYRIDIKTLSQAFKAYFYMTINGDSDSTDEFVVKSGGASVNSVVSTVFYLKSVGTISTISFYYTDTMWPLGADPWNGQYINIAYSDGDIVRTFNATLPQTSLYAGTTYTACTLPASPANGNFTCESTLTTSVAGCVAKCNAPTYTTTSIASRAFTCGSDGSYRDGSLVLLNTTQPFCQSM* # ORIGINAL: g5954.t1 original gene structure, not modified by PASA NODE_2337_length_6660_cov_26.3897 AUGUSTUS gene 5254 6405 . + . ID=g5954;Name=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS mRNA 5254 6405 . + . ID=g5954.t1;Parent=g5954;Name=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 5254 5317 . + . ID=g5954.t1.exon1;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 5254 5317 . + 0 ID=cds.g5954.t1;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 5426 5566 . + . ID=g5954.t1.exon2;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 5426 5566 . + 2 ID=cds.g5954.t1;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 5725 5868 . + . ID=g5954.t1.exon3;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 5725 5868 . + 2 ID=cds.g5954.t1;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 5980 6114 . + . ID=g5954.t1.exon4;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 5980 6114 . + 2 ID=cds.g5954.t1;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS exon 6242 6405 . + . ID=g5954.t1.exon5;Parent=g5954.t1 NODE_2337_length_6660_cov_26.3897 AUGUSTUS CDS 6242 6405 . + 2 ID=cds.g5954.t1;Parent=g5954.t1 #PROT g5954.t1 g5954 MAACTCNPGYVSDTKDGLGCRVRTICDVNPTICGADSTCSTVPQKNNTAVCTCHPGFKSMAGNGTRCRQTTPCDGDVNPCGSFSKCSSPPNDNTTFTCDCDALYISDSGTAVKDCRLATFCDLNKAYCGAFSSCVSTDALSGTCPCIGAAYLPNADQRSCRVKTDCDDHPCFPEGIATCNVSSTNISISTCSCRDGYIADQSTRFCKGSFGYSMC* # PASA_UPDATE: g6783.t1, single gene model update, valid-1, status:[pasa:asmbl_7819,status:12], valid-1 NODE_503_length_22222_cov_39.6527 . gene 357 2579 . - . ID=g6783;Name=g6783.t1 NODE_503_length_22222_cov_39.6527 . mRNA 357 2579 . - . ID=g6783.t1;Parent=g6783;Name=g6783.t1 NODE_503_length_22222_cov_39.6527 . five_prime_UTR 2471 2579 . - . ID=g6783.t1.utr5p1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . five_prime_UTR 2315 2353 . - . ID=g6783.t1.utr5p2;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 2471 2579 . - . ID=g6783.t1.exon1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 1867 2353 . - . ID=g6783.t1.exon2;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . CDS 1867 2314 . - 0 ID=cds.g6783.t1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 1488 1726 . - . ID=g6783.t1.exon3;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . CDS 1488 1726 . - 2 ID=cds.g6783.t1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 1153 1335 . - . ID=g6783.t1.exon4;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . CDS 1153 1335 . - 0 ID=cds.g6783.t1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 618 905 . - . ID=g6783.t1.exon5;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . CDS 618 905 . - 0 ID=cds.g6783.t1;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . exon 357 440 . - . ID=g6783.t1.exon6;Parent=g6783.t1 NODE_503_length_22222_cov_39.6527 . CDS 357 440 . - 0 ID=cds.g6783.t1;Parent=g6783.t1;3_prime_partial=true #PROT g6783.t1 g6783 MTSERDTSTMDVKLQDVEPLVTSGAGVGSASATHVPGHVRTPSAGAGTAMQEPTLVRQNTSKEIPRHFQEMSIRLENSVKNIPASDVGMVAESYRTKKKKDKEREVEKAKAGEEPQGRDYVAHEHLLSVADLANEIEAELNVQHPRKSKGLTSADAEKRLLANGRNRLTPPKRTPEWILYLHEFINPFMILLEAAAVLCFIAYGLDQSEKTNLYLGFVLLAIVTLTCTMAHMQNRKSTKVMKGFENMLPQKCKVIREGREQIVESETIVLGDIVVLAAGDKVPADVRMVEVNDLKVDNSSLTGECEPQIRSIDSTDNNPLETGNLAFYSTLAVEGTGVALVIRTGDETLIGRIAKLSSVEKEELTTLQLEVRRFVKFISILALTLGIIFLVAGFIRGISAITNLINTIGIIVAN # ORIGINAL: g6787.t1 original gene structure, not modified by PASA NODE_503_length_22222_cov_39.6527 AUGUSTUS gene 15160 21014 . + . ID=g6787;Name=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS mRNA 15160 21014 . + . ID=g6787.t1;Parent=g6787;Name=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 15160 15327 . + . ID=g6787.t1.exon1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 15160 15327 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 15512 15754 . + . ID=g6787.t1.exon2;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 15512 15754 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 15896 16168 . + . ID=g6787.t1.exon3;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 15896 16168 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 16395 16532 . + . ID=g6787.t1.exon4;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 16395 16532 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 16668 16808 . + . ID=g6787.t1.exon5;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 16668 16808 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 16998 17147 . + . ID=g6787.t1.exon6;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 16998 17147 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 17276 17459 . + . ID=g6787.t1.exon7;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 17276 17459 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 17622 19021 . + . ID=g6787.t1.exon8;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 17622 19021 . + 2 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 19219 19581 . + . ID=g6787.t1.exon9;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 19219 19581 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 19879 20028 . + . ID=g6787.t1.exon10;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 19879 20028 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 20216 20376 . + . ID=g6787.t1.exon11;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 20216 20376 . + 0 ID=cds.g6787.t1;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS exon 20633 21014 . + . ID=g6787.t1.exon12;Parent=g6787.t1 NODE_503_length_22222_cov_39.6527 AUGUSTUS CDS 20633 21014 . + 1 ID=cds.g6787.t1;Parent=g6787.t1 #PROT g6787.t1 g6787 MWLKSVVIEGFKSYGQRTVIDGFDPHFNAITGLNGSGKSNVLDAICFVLGIQNLNQVRASSIQDLVYKQGQAGVTKATVTLNFNNEEKKDSPVGYEAYDEISITRQACAHEDAELHEHIPCVHYIPHHNWSQLMYSSVVIGGKNKYLINGTMAQPTRVQNLFHSVQLNVNNPHFLIMQGMITKVLNMKPPEILALIEEAAGTRMFETKKVAALKTIEKKDTKLKQLNDILAQDIAPQLERLGNERHNFLQFQNNKMEAERYGRLIIAYDYSKSEETLKKSNEEHKNLTDEIESLKNSIKKYDAQIEESKSTLSALERKRDAEMGGAMQELEGSVAALSKELVKENTTWQHRKDAVDSEKKAIRALDKNIQEVKTNIASAQKSKDAASQRLTKLEAASEAATAELESVQRRVHGFSMASSKDGHLKTQTDALMETQAEVDAAKTSAQQSDMRAAHLEADAEKRRKQAKAGERESAKLQGELKAAETAVKDLEAQIAALAHDPAKVQKLAAGLKQEEAKAAALREKVDSLSARLGGLDFAYSDPEPKFDRKRVKGLVANLISVKDAAAATALEVTAGGKLYNVVVDTEATGKSLIANGKLKKRVTIIPLNKITPHVLSDGQIRAAQKEASDSGNAGAVRPALSLVGYDDDVAAAMQYVFGPAFVCDGLDLARKVTFNKGVMARTVTLDGDVFDPSGTLTGGSREKNASSVLADLAALREASEDLAKVDARIEHLRKEHTKAKQAAAEFDKLTSACELKQHESKLLEQRMASSAHGKIVHELAEIEASIAKERASATEARDREKRSLARLESIQAEIGGSAQSRDKELKSMEGQLEKLKAKAASTIEATRLARDEVTTIALELAALESELMALKEQLAQAEANSAQAVADERAMAAMVDKKKAAYEAACDDLSRKREKLNATDKEISAAVAKRDKCAKQLSDAELAIKKAEHSLTRLAKDRKDASRIVEGLGAKYAWIATERQFFGKHGTAYDFAAVDPEEARKKLTRLEEQQAKLSKTINMKVMAMFERADQEYRDLMNKKRIVEKDKQKIEDAITELDAKKNEALKKTYTQVNRDFGSIFSTLLPGAKAKLAAPEGGTELDGLEVKVAFGDAWKESLTELSGGQRSLVALSLILSLLLFKPAPMYILDEVDAALDLSHTQNIGTMLRTHFSQSQFIVVSLKEGMFNNANVLFKTRFVDGVSTVSRTVQSSSSASSASHDENASGKNANKRQKTVAGASAASKGKALAPVNV* # PASA_UPDATE: g6784.t1, single gene model update, valid-1, status:[pasa:asmbl_7820,status:3], valid-1 NODE_503_length_22222_cov_39.6527 . gene 3090 9308 . - . ID=g6784;Name=g6784.t1 NODE_503_length_22222_cov_39.6527 . mRNA 3090 9308 . - . ID=g6784.t1;Parent=g6784;Name=g6784.t1 NODE_503_length_22222_cov_39.6527 . five_prime_UTR 9022 9308 . - . ID=g6784.t1.utr5p1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 8995 9308 . - . ID=g6784.t1.exon1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 8995 9021 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 8610 8773 . - . ID=g6784.t1.exon2;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 8610 8773 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 8332 8473 . - . ID=g6784.t1.exon3;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 8332 8473 . - 1 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 8031 8096 . - . ID=g6784.t1.exon4;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 8031 8096 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 7563 7667 . - . ID=g6784.t1.exon5;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 7563 7667 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 7374 7419 . - . ID=g6784.t1.exon6;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 7374 7419 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 6984 7063 . - . ID=g6784.t1.exon7;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 6984 7063 . - 2 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 6645 6743 . - . ID=g6784.t1.exon8;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 6645 6743 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 6246 6342 . - . ID=g6784.t1.exon9;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 6246 6342 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 5983 6056 . - . ID=g6784.t1.exon10;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 5983 6056 . - 2 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 5577 5701 . - . ID=g6784.t1.exon11;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 5577 5701 . - 0 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 5230 5357 . - . ID=g6784.t1.exon12;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 5230 5357 . - 1 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . exon 3090 4963 . - . ID=g6784.t1.exon13;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . CDS 3411 4963 . - 2 ID=cds.g6784.t1;Parent=g6784.t1 NODE_503_length_22222_cov_39.6527 . three_prime_UTR 3090 3410 . - . ID=g6784.t1.utr3p1;Parent=g6784.t1 #PROT g6784.t1 g6784 MATLEDNFWGTRMAGFGVLSHNMKAGQLAYKELSEFLRARSVAEDAYAKSLVRLGKTVIFEDLGSFMPMWAQLQSTTEELGNIHAQFSNDLIDLSKLVKDAGNMQAEGQKWTKTCEVPELQQTFQVAFQNLDKSKKASARYHKEAEDLQNEFIRKTKEPGVNPRELDKAEKDLKKAQTKANEAQKESRVMSTRFEEAKERYWASMSDALKRFQELEETHLEKLRTLTLKFSANEVLVLADCSRIADECKRKWEGLTVEKLIAKFAQTRGTGTERPDGSGGEVPAEASGSGKSAAVDPSLKHSDSNHSINSLPEDNGEKRGRAHTFTGTLRLFKKKKDSKDGEAAGAATATATGAAPAGGQAAAKVDEEGFSEAPDLATEYRAGFAGTDKKASDSDSDQEEENTPKLRFVINQAPAVQQATVEDIAANLTDLKLALPDQPRARSRTFNGPTTRMRPRGMSEAPGTAAQIPETASGPGTPGERSLDTSGKSTSEVFQFPTSASTDSFGSGGTPRPQSPGGTLLAPPGVDSPRTRRGSSASSSLAPAFNASHRHSVIGIPASSGSSGAGSSSAFSSGFGNFSTFGTFGASAQSASADGFPAASSDAPVLKGQTSSGNLFDSPLTMSRRTSSVPVPTSSGFPSFHLVDAALTETVNAYFKGAKVAKYVVAGDILFNFPAAAAGVFERATSAGFRIVEGLSKLDSFQPNPQFIDAAQSKPDEGVYAFDLAAVAKHLHGASASTSRVDVLKYSMKPVHDPSVIPLRLCANYKADATSTDVVLHFQCSSSLEHPLTEVSATIGVDGAVVSCMANPNGAWNAEQKRLLWSVPSLSASNPPSGRGKFTAKFETTALTTPTTANLRFRCDKSTLSGLKIEVFCIVPNEESPLQLSRVIKRFSTGKYMADPE* # PASA_UPDATE: g6785.t1, single gene model update, valid-1, status:[pasa:asmbl_7822,status:12], valid-1 NODE_503_length_22222_cov_39.6527 . gene 10522 11701 . + . ID=g6785;Name=g6785.t1 NODE_503_length_22222_cov_39.6527 . mRNA 10522 11701 . + . ID=g6785.t1;Parent=g6785;Name=g6785.t1 NODE_503_length_22222_cov_39.6527 . exon 10522 11701 . + . ID=g6785.t1.exon1;Parent=g6785.t1 NODE_503_length_22222_cov_39.6527 . CDS 10522 11604 . + 0 ID=cds.g6785.t1;Parent=g6785.t1 NODE_503_length_22222_cov_39.6527 . three_prime_UTR 11605 11701 . + . ID=g6785.t1.utr3p1;Parent=g6785.t1 #PROT g6785.t1 g6785 MGDAVVGRMAEIDRLVADSPERVILMLAGLLEQLILRNDLLPVRLNHFHARSPPPISVRSYLQRFAKYAPFGNECFILVLIYLDRIVQRSGVVVTSLNVHRLLVTGLMLAAKYSQDKYYTNKHYAKVGGLPVQELNMLEIEFLRMIDFDLHANVSWLEKYYAQLCAHCGHLVVDDLLAPPAAAPAQGQPSPAPVAAVVPAAQQAIAPALHPHTPNAVAAVAGVTGIARLDRGDTHLHRPPVSSPKRQAQEMGVPTSTPPRKRRQSQNASDGSPAVAAAMHSATVPALNSAPLAAGSAAAQSEHAIHAAGGANGWQDHHLHAQQRLRGVAGIGASPTVVATATAGYACDTGYSPEGVDRYY* # PASA_UPDATE: g6786.t1, single gene model update, valid-1, status:[pasa:asmbl_7821,status:12], valid-1 NODE_503_length_22222_cov_39.6527 . gene 12753 14660 . - . ID=g6786;Name=g6786.t1 NODE_503_length_22222_cov_39.6527 . mRNA 12753 14660 . - . ID=g6786.t1;Parent=g6786;Name=g6786.t1 NODE_503_length_22222_cov_39.6527 . five_prime_UTR 14585 14660 . - . ID=g6786.t1.utr5p1;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . exon 14410 14660 . - . ID=g6786.t1.exon1;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . CDS 14410 14584 . - 0 ID=cds.g6786.t1;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . exon 13625 13832 . - . ID=g6786.t1.exon2;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . CDS 13625 13832 . - 2 ID=cds.g6786.t1;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . exon 12753 13395 . - . ID=g6786.t1.exon3;Parent=g6786.t1 NODE_503_length_22222_cov_39.6527 . CDS 12753 13395 . - 1 ID=cds.g6786.t1;Parent=g6786.t1 #PROT g6786.t1 g6786 MSVGTANRFDLLVDDENDDTATLEKRAAEQKKKQEDAKRIVPAAAAPAPARSAAPAQQGRGGARPAGDRPPRANGDFPAERDNRSRGEGRGEGRGGRGGRGGRGGERGAGGEGRPRRDFERHSGSNKTGVKSEDKRHGQGKFNWGAEGAEATVEGAAAAPAAEGEAEGTPAAAPAEGAAAPAADAAPVEEEEKTMTLEEYRKKQQEALSKFALPEARKAGEGQQLDKKWQKAVELKNEEGDFINLGAKKETKAAAAAAAEVAKPRKEVQTVEVGFKFTEPARESREGSSRGGRGGRGGRGGRGDGRPSSGRGGNAPRGASRGPGGKVPDVNDKDAFPTLGK* # PASA_UPDATE: g3962.t1, single gene model update, valid-1, status:[pasa:asmbl_3449,status:12], valid-1 NODE_2080_length_7833_cov_41.603 . gene 1 1939 . - . ID=g3962;Name=g3962.t1 NODE_2080_length_7833_cov_41.603 . mRNA 1 1939 . - . ID=g3962.t1;Parent=g3962;Name=g3962.t1 NODE_2080_length_7833_cov_41.603 . five_prime_UTR 1753 1939 . - . ID=g3962.t1.utr5p1;Parent=g3962.t1 NODE_2080_length_7833_cov_41.603 . exon 1 1939 . - . ID=g3962.t1.exon1;Parent=g3962.t1 NODE_2080_length_7833_cov_41.603 . CDS 1 1752 . - 0 ID=cds.g3962.t1;Parent=g3962.t1;3_prime_partial=true #PROT g3962.t1 g3962 MAMVLYPRALTQHSTQYSAADSHLFVHATSASTQATADNGKHSLATSSSRSSSPLSHASLLLSMMVTPDKVIAVHADHSASFAAGDTDNALRDGDSNAGSQAGIDASADTPSEPLAAAERKPLLAGAAADQAATADGSGSTEPSAEKVFQQLVEIVCPKRESKKNHIKRPMNAFMIFSTSFRGTLREQFPNHDNKLISKMLGDMWAELAESEREKYVDMATQLKTAHRKAHPDWKYNKARKPPVTKITAQTVAAGGSTSPTTAAGGKASSTHARSVVKGSDGTRVSGRHQSSVPPPPSSMFAPGAPVPSYGQAAYQGADGYVQGRMYAESGHGGSAYDYGRRYPQSMPGMVPSSGRDAEAGRWYGQGRPDQYPSPVAAPYADAQAAANGMYSSPASVGWIGAVTAAAARHMATSQGGAKTTPTGYGQPGMPVPQGIYGASAGAYYATYPGADPSYGGWNDRQAYSGPPLNRPNYGGEWAQPDGRRMSPTGYPPSTQSAPLRPVGAQAQYSEQPQHTQQHTQQQQQQQNQHQQQQQQQLQQNQQQQIQHQQQQQQQLQQNQQQQQQQQQQQQQQQQQQQQQQQQQ # PASA_UPDATE: g3963.t1, single gene model update, valid-1, status:[pasa:asmbl_3448,status:3], valid-1 NODE_2080_length_7833_cov_41.603 . gene 3071 4261 . - . ID=g3963;Name=g3963.t1 NODE_2080_length_7833_cov_41.603 . mRNA 3071 4261 . - . ID=g3963.t1;Parent=g3963;Name=g3963.t1 NODE_2080_length_7833_cov_41.603 . five_prime_UTR 4026 4261 . - . ID=g3963.t1.utr5p1;Parent=g3963.t1 NODE_2080_length_7833_cov_41.603 . exon 3829 4261 . - . ID=g3963.t1.exon1;Parent=g3963.t1 NODE_2080_length_7833_cov_41.603 . CDS 3829 4025 . - 0 ID=cds.g3963.t1;Parent=g3963.t1 NODE_2080_length_7833_cov_41.603 . exon 3071 3556 . - . ID=g3963.t1.exon2;Parent=g3963.t1 NODE_2080_length_7833_cov_41.603 . CDS 3274 3556 . - 1 ID=cds.g3963.t1;Parent=g3963.t1 NODE_2080_length_7833_cov_41.603 . three_prime_UTR 3071 3273 . - . ID=g3963.t1.utr3p1;Parent=g3963.t1 #PROT g3963.t1 g3963 MPTHSRAGAFMSRCLGLFVRGDGRGRRAYLRPLASEVLTVHLRTLRPDCTSFYIPYHAAINDQFGRSRFNWNVDSRNYDILRMGCFPFVKYHCTHTSAPVDSTVDDAVFRVVKMVNFGIPTLAYGIGSLLLLKRSDTVQTSKGAVKIYFLYDENGNGVY* # PASA_UPDATE: g3964.t1, single gene model update, valid-1, status:[pasa:asmbl_3452,status:3], valid-1 # PASA_UPDATE: g3964.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3453,status:3], valid-1 NODE_2080_length_7833_cov_41.603 . gene 4607 7035 . + . ID=g3964;Name=g3964.t1 NODE_2080_length_7833_cov_41.603 . mRNA 4607 7035 . + . ID=g3964.t1;Parent=g3964;Name=g3964.t1 NODE_2080_length_7833_cov_41.603 . five_prime_UTR 4607 4768 . + . ID=g3964.t1.utr5p1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . exon 4607 4945 . + . ID=g3964.t1.exon1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . CDS 4769 4945 . + 0 ID=cds.g3964.t1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . exon 5145 5264 . + . ID=g3964.t1.exon2;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . CDS 5145 5264 . + 0 ID=cds.g3964.t1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . exon 5415 6114 . + . ID=g3964.t1.exon3;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . CDS 5415 6114 . + 0 ID=cds.g3964.t1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . exon 6420 6533 . + . ID=g3964.t1.exon4;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . CDS 6420 6533 . + 2 ID=cds.g3964.t1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . exon 6789 7035 . + . ID=g3964.t1.exon5;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . CDS 6789 6844 . + 2 ID=cds.g3964.t1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . three_prime_UTR 6845 7035 . + . ID=g3964.t1.utr3p1;Parent=g3964.t1 NODE_2080_length_7833_cov_41.603 . mRNA 4607 7035 . + . ID=g3964.t1.1.5b6be70b;Parent=g3964;Name=g3964.t1 NODE_2080_length_7833_cov_41.603 . five_prime_UTR 4607 4768 . + . ID=g3964.t1.1.5b6be70b.utr5p1;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . exon 4607 4945 . + . ID=g3964.t1.1.5b6be70b.exon1;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . CDS 4769 4945 . + 0 ID=cds.g3964.t1.1.5b6be70b;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . exon 5145 5264 . + . ID=g3964.t1.1.5b6be70b.exon2;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . CDS 5145 5264 . + 0 ID=cds.g3964.t1.1.5b6be70b;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . exon 5415 7035 . + . ID=g3964.t1.1.5b6be70b.exon3;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . CDS 5415 6314 . + 0 ID=cds.g3964.t1.1.5b6be70b;Parent=g3964.t1.1.5b6be70b NODE_2080_length_7833_cov_41.603 . three_prime_UTR 6315 7035 . + . ID=g3964.t1.1.5b6be70b.utr3p1;Parent=g3964.t1.1.5b6be70b #PROT g3964.t1 g3964 MFKSLLSFGGDSGHNKPTTDPGVKHGEEGDGEAAGSTSGWGSLVFGVTSNIATIATKIKTSMEEAPIMKDFTAQQDEFVKEKRQAGGSDGVPPWVGYIQEDQIKAQILALSTDKRNFITGPPQGSAFHFNFARYAPIAMATLNEDKSLEQMRFALVPSQVNEENFWRNYFYRVALIKRSSQLSAVSTSSRDSPHSHAVGTHSGRDSASDVGGESTTQPTLDGVSGSATGGNNSVTSSLGNIGLSSASADGTRSSSLEGISETKRAGSADAFKPIEYNPEDDDDNALSRGRGSVDGIEFASDSLEEQVLSGGRDVPVSVARETAAAASSIQSSKSALDVNAWEKELREDMLDLDISAALDTELAEYSLPDEPLSEMSWETEVRDALEDQ* #PROT g3964.t1.1.5b6be70b g3964 MFKSLLSFGGDSGHNKPTTDPGVKHGEEGDGEAAGSTSGWGSLVFGVTSNIATIATKIKTSMEEAPIMKDFTAQQDEFVKEKRQAGGSDGVPPWVGYIQEDQIKAQILALSTDKRNFITGPPQGSAFHFNFARYAPIAMATLNEDKSLEQMRFALVPSQVNEENFWRNYFYRVALIKRSSQLSAVSTSSRDSPHSHAVGTHSGRDSASDVGGESTTQPTLDGVSGSATGGNNSVTSSLGNIGLSSASADGTRSSSLEGISETKRAGSADAFKPIEYNPEDDDDNALSRGRGSVDGIEFASDSLEEQVLSGGRDVPVSVARETAAAASSIQSSSGCTYYFCLCLPVIVRVFVWGCLYVHMLFVIVFCVFVYVFVLGYMCVYMYVRMMCMWESRCVVVVS* # ORIGINAL: g2344.t1 original gene structure, not modified by PASA NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS gene 2 638 . + . ID=g2344;Name=g2344.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS mRNA 2 638 . + . ID=g2344.t1;Parent=g2344;Name=g2344.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS exon 2 638 . + . ID=g2344.t1.exon1;Parent=g2344.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS CDS 2 638 . + 1 ID=cds.g2344.t1;Parent=g2344.t1 #PROT g2344.t1 g2344 LEDNVVAWITASQLSQLQDCLKIFHMILGSPSTVAKYVKKIEDIVDDLHDTFNSVYIYPLLRALNIKLDGGFRIAPDATPILVSPTELTSPREYNRRGDCDGCDSSDAPNPLTALVERAITVGTDNVTGSVSINITNKKKLIEECVAALVPVIKKLHAVSHSMILLAAEIESINKSPLPGKLGGLFQLGESFSTINLDRIKAELVLIALRS* # ORIGINAL: g2345.t1 original gene structure, not modified by PASA NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS gene 1643 2391 . + . ID=g2345;Name=g2345.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS mRNA 1643 2391 . + . ID=g2345.t1;Parent=g2345;Name=g2345.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS exon 1643 2391 . + . ID=g2345.t1.exon1;Parent=g2345.t1 NODE_3991_length_2391_cov_42.7491_potentialcontaminant AUGUSTUS CDS 1643 2391 . + 0 ID=cds.g2345.t1;Parent=g2345.t1 #PROT g2345.t1 g2345 MITQCTLDELEGGADDASKCPFKKGMNVDSFRVAVLSSSVTRPGLNPCSSLSNDNIAKVTTKMANAFGLPATDPTLKTAVATLFNPSSVKQMKAADYNALANNSSWTDTLAALSTSGKTLLNNVTNALVSGLQPLRDKSLVGLRNYFTAAYPNMADAATTLGKITDYLNIKDSTGLYVCANGDIDNLVAGQPIANAACSSRIVTAKRYAALTSPATWSNTTAMRMYYIPMPSTNVWQGATGYSAGMPFD # PASA_UPDATE: g8175.t1, single gene model update, valid-1, status:[pasa:asmbl_5089,status:12], valid-1 NODE_2831_length_5031_cov_38.9401 . gene 1478 2414 . - . ID=g8175;Name=g8175.t1 NODE_2831_length_5031_cov_38.9401 . mRNA 1478 2414 . - . ID=g8175.t1;Parent=g8175;Name=g8175.t1 NODE_2831_length_5031_cov_38.9401 . five_prime_UTR 2402 2414 . - . ID=g8175.t1.utr5p1;Parent=g8175.t1 NODE_2831_length_5031_cov_38.9401 . exon 2324 2414 . - . ID=g8175.t1.exon1;Parent=g8175.t1 NODE_2831_length_5031_cov_38.9401 . CDS 2324 2401 . - 0 ID=cds.g8175.t1;Parent=g8175.t1 NODE_2831_length_5031_cov_38.9401 . exon 1478 2028 . - . ID=g8175.t1.exon2;Parent=g8175.t1 NODE_2831_length_5031_cov_38.9401 . CDS 1885 2028 . - 0 ID=cds.g8175.t1;Parent=g8175.t1 NODE_2831_length_5031_cov_38.9401 . three_prime_UTR 1478 1884 . - . ID=g8175.t1.utr3p1;Parent=g8175.t1 #PROT g8175.t1 g8175 MSGKGAEDPQVAFEIERQYLIDDLARELEDMSVLMSQLNDNMGVLVQRGVDFEKFGEIWAYFNTVLTAAKGSP* # PASA_UPDATE: g8174.t1, single gene model update, valid-1, status:[pasa:asmbl_5090,status:12], valid-1 NODE_2831_length_5031_cov_38.9401 . gene 346 1407 . + . ID=g8174;Name=g8174.t1 NODE_2831_length_5031_cov_38.9401 . mRNA 346 1407 . + . ID=g8174.t1;Parent=g8174;Name=g8174.t1 NODE_2831_length_5031_cov_38.9401 . five_prime_UTR 346 347 . + . ID=g8174.t1.utr5p1;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . exon 346 467 . + . ID=g8174.t1.exon1;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . CDS 348 467 . + 0 ID=cds.g8174.t1;Parent=g8174.t1;5_prime_partial=true NODE_2831_length_5031_cov_38.9401 . exon 785 911 . + . ID=g8174.t1.exon2;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . CDS 785 911 . + 0 ID=cds.g8174.t1;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . exon 1074 1407 . + . ID=g8174.t1.exon3;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . CDS 1074 1261 . + 2 ID=cds.g8174.t1;Parent=g8174.t1 NODE_2831_length_5031_cov_38.9401 . three_prime_UTR 1262 1407 . + . ID=g8174.t1.utr3p1;Parent=g8174.t1 #PROT g8174.t1 g8174 LGFLFLFQLATYAHINNLGDLSGGGWFPIPIFQVISLSQQLYRIGMGVLLLIMSRLERDSRSLRELLETADMNHRLIVARLQGFSVPPHIDAAVGIELNTFADVELRKKLNEEVKNYVAEDLAVAATTAAATQASAPADLRQRK* # PASA_UPDATE: g8176.t1, single gene model update, valid-1, status:[pasa:asmbl_5091,status:12], valid-1 NODE_2831_length_5031_cov_38.9401 . gene 2711 4769 . + . ID=g8176;Name=g8176.t1 NODE_2831_length_5031_cov_38.9401 . mRNA 2711 4769 . + . ID=g8176.t1;Parent=g8176;Name=g8176.t1 NODE_2831_length_5031_cov_38.9401 . five_prime_UTR 2711 2901 . + . ID=g8176.t1.utr5p1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . exon 2711 3111 . + . ID=g8176.t1.exon1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . CDS 2902 3111 . + 0 ID=cds.g8176.t1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . exon 3304 3477 . + . ID=g8176.t1.exon2;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . CDS 3304 3477 . + 0 ID=cds.g8176.t1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . exon 3639 3758 . + . ID=g8176.t1.exon3;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . CDS 3639 3758 . + 0 ID=cds.g8176.t1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . exon 4084 4230 . + . ID=g8176.t1.exon4;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . CDS 4084 4230 . + 0 ID=cds.g8176.t1;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . exon 4629 4769 . + . ID=g8176.t1.exon5;Parent=g8176.t1 NODE_2831_length_5031_cov_38.9401 . CDS 4629 4769 . + 0 ID=cds.g8176.t1;Parent=g8176.t1 #PROT g8176.t1 g8176 MVESDTENPDSLTVVPVMHRKPSWLAQTLCVDCLVPNGILIPLECTYAMTIADIKEKLWEHASSYPLIDKLKKPDSYVFICVNIEGEIEELLDEQKVLGDVHFFSPLLKVVERRGNKQEKLLNWQIGSLIGKALVMYGSMKVPEVDDFRRNILEVCQQATEERAKVSEELNAFPPDVENCDVPSHVRAKLTQKGTLLVNLYVLTEGTSYSKFTLSVDGDATPEKLVAMGLRKQAVSLNVPVEGEPGDYLIKVEYIHHFSSSSP* # ORIGINAL: g7806.t1 original gene structure, not modified by PASA NODE_1400_length_11597_cov_41.5857 AUGUSTUS gene 97 3461 . + . ID=g7806;Name=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS mRNA 97 3461 . + . ID=g7806.t1;Parent=g7806;Name=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 97 265 . + . ID=g7806.t1.exon1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 97 265 . + 0 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 547 634 . + . ID=g7806.t1.exon2;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 547 634 . + 2 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 884 982 . + . ID=g7806.t1.exon3;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 884 982 . + 1 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 1209 1354 . + . ID=g7806.t1.exon4;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 1209 1354 . + 1 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 1485 2262 . + . ID=g7806.t1.exon5;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 1485 2262 . + 2 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 2540 2632 . + . ID=g7806.t1.exon6;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 2540 2632 . + 1 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 2918 2986 . + . ID=g7806.t1.exon7;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 2918 2986 . + 1 ID=cds.g7806.t1;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 3398 3461 . + . ID=g7806.t1.exon8;Parent=g7806.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 3398 3461 . + 1 ID=cds.g7806.t1;Parent=g7806.t1 #PROT g7806.t1 g7806 DSMPPPLRIDGSLTKPGDRQKVVTAFNSDMRHRICLLTTQVGGVGLTLTGADRVIIFDPSWNPATDAQAVDRAYRIGQTRNVVVYRLITCGTIEEKIYRRQVFKGSLSITATRSANPTSLFTRQEMRELFVLDDVTESATHRQLAHLSSSRTSDPTLDAHVDWLLSRDKVAGITDHDLVFTDQMSGDGPPATPTPAPPLSRSHMGTVQATPSATPFQREGKQPTTRKKTKPSNETDDVPAGGNKEAWVFGDIAGAAVTALGDLSIGGDTSADMHVPSENSCAASPHASADAEGNCESIDLVEPSDAGCADVSAVDSTTLGVTHADTTPHSMIDDDRGETCGDDCDDGLYVSDGDRHSACDITLEVSARDQIGFHLDNLDMADGGTAGSLPPSTVDDCNGGGANDTNDAISAVCTAHKSTPRGLLNRGIVGLPVRVNRCGCAMSDEERTQYGALLEIAVELDNDGQSYQALEALLSALELSSDNPAVHMAALNMGIRLGLAN* # PASA_UPDATE: g7808.t1, single gene model update, valid-1, status:[pasa:asmbl_1479,status:3], valid-1 NODE_1400_length_11597_cov_41.5857 . gene 6304 10414 . - . ID=g7808;Name=g7808.t1 NODE_1400_length_11597_cov_41.5857 . mRNA 6304 10414 . - . ID=g7808.t1;Parent=g7808;Name=g7808.t1 NODE_1400_length_11597_cov_41.5857 . five_prime_UTR 10208 10414 . - . ID=g7808.t1.utr5p1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 10076 10414 . - . ID=g7808.t1.exon1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 10076 10207 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 9691 9793 . - . ID=g7808.t1.exon2;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 9691 9793 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 9238 9368 . - . ID=g7808.t1.exon3;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 9238 9368 . - 2 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 8910 9025 . - . ID=g7808.t1.exon4;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 8910 9025 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 8184 8349 . - . ID=g7808.t1.exon5;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 8184 8349 . - 1 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 7707 7980 . - . ID=g7808.t1.exon6;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 7707 7980 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 7219 7334 . - . ID=g7808.t1.exon7;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 7219 7334 . - 2 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 6857 6970 . - . ID=g7808.t1.exon8;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 6857 6970 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . exon 6304 6597 . - . ID=g7808.t1.exon9;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . CDS 6508 6597 . - 0 ID=cds.g7808.t1;Parent=g7808.t1 NODE_1400_length_11597_cov_41.5857 . three_prime_UTR 6304 6507 . - . ID=g7808.t1.utr3p1;Parent=g7808.t1 #PROT g7808.t1 g7808 MVKETKFYDLLGVEPTANEADLKKAFRKLALKYHPDKNPDAGDKFKELSFAYEVLADPKKREIYDKYGEQGLKEGGGPGGGFSPEDVFSQFFGGGGLFGGGGGGRRSERGERRGRDMAHPLKVSLEDLYKGKTSKLALQKHILCPKCDGKGGKDGAVQSCKSCNGQGVKISLRQIGPGMVQQMQSACPECQGEGEIIKEKDRCKNCMGKKTTVERKVLEVHIEKGMKDGQKIVFHGEGDQAPGIVPGDIIIVIDEKEHPTFKRDGQDLVMEIEVELGEALCGFKRIITHLDDRKLLVTSPPGQVIKEGAVKTIKNEGMPRHRNPFEKGNLYISFKVKFPEDNFADANGLELLRRILPPARPLPQFAPDEVEEVELDKFEPGTRKDSRSNGNAYDEDEEHSHAGGGPGVQCQTQ* # ORIGINAL: g7807.t1 original gene structure, not modified by PASA NODE_1400_length_11597_cov_41.5857 AUGUSTUS gene 4716 5243 . + . ID=g7807;Name=g7807.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS mRNA 4716 5243 . + . ID=g7807.t1;Parent=g7807;Name=g7807.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS exon 4716 5243 . + . ID=g7807.t1.exon1;Parent=g7807.t1 NODE_1400_length_11597_cov_41.5857 AUGUSTUS CDS 4716 5243 . + 0 ID=cds.g7807.t1;Parent=g7807.t1 #PROT g7807.t1 g7807 MPFVPTKGAFADIAGALLQWRMTILGGCRVLEGLSRWRHHRFFTRPVLPVLLGPRGTQRPSPPRGCAGCAGGGDVQASRQQSDDDHSRDHPGSAGVPLDALPVEIARSRGHTIDDWAPGWKRALARERNTIAQPVGGIDIVVMPTRRRVNELQSTATFSPGDTHSLPDDWLDTVT* # PASA_UPDATE: g13090.t1, single gene model update, valid-1, status:[pasa:asmbl_9020,status:12],[pasa:asmbl_9021,status:12], valid-1 NODE_716_length_18707_cov_44.4243 . gene 7836 13117 . - . ID=g13090;Name=g13090.t1 NODE_716_length_18707_cov_44.4243 . mRNA 7836 13117 . - . ID=g13090.t1;Parent=g13090;Name=g13090.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 12903 13117 . - . ID=g13090.t1.utr5p1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 12829 13117 . - . ID=g13090.t1.exon1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 12829 12902 . - 0 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 12412 12601 . - . ID=g13090.t1.exon2;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 12412 12601 . - 1 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 12095 12180 . - . ID=g13090.t1.exon3;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 12095 12180 . - 0 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 11759 11846 . - . ID=g13090.t1.exon4;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 11759 11846 . - 1 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 11184 11555 . - . ID=g13090.t1.exon5;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 11184 11555 . - 0 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 10732 10855 . - . ID=g13090.t1.exon6;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 10732 10855 . - 0 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 10305 10427 . - . ID=g13090.t1.exon7;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 10305 10427 . - 2 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 9626 9986 . - . ID=g13090.t1.exon8;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 9626 9986 . - 2 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 9059 9450 . - . ID=g13090.t1.exon9;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 9059 9450 . - 1 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 8657 8883 . - . ID=g13090.t1.exon10;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 8657 8883 . - 2 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . exon 7836 8429 . - . ID=g13090.t1.exon11;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . CDS 7992 8429 . - 0 ID=cds.g13090.t1;Parent=g13090.t1 NODE_716_length_18707_cov_44.4243 . three_prime_UTR 7836 7991 . - . ID=g13090.t1.utr3p1;Parent=g13090.t1 #PROT g13090.t1 g13090 MKDSVLSARLSTTGLGGNGASQERRAPFTVILAASKFVRVACVFLLFRITQQMPALACNALVLGISAFFFLVLQRPWSDSRVSITPKQWLRIFTQAVLHGASVCLWIVGLRLCGPVKSTLLFDFGDVIFMGISGTCLALEWRRPLKFQVAIVLAVSVLTLLWADRRDPSGPALGGAPVDDDTLDIGNEADGNGGGGRIAHRSTFESVGMSDTVGGALCLLLGGFLVMWRRMAARKLSVEIGGAKRLQAITVAIAALLSVPLAMLDNAAHKLLPDGHSVGLDNVLLTAVATTAGIVCDYYADSIASARMENPVYVRISLVASFGSALVLSWLGFEAAPTVGTATLIAFAGIFWALGSSSKGDRSSTGSGTLIGYAAGTGLPLYSFASSPDTTPMASFRAIMRTILESTDSRQIFIFLCINLCFMFVEFLYGMWTNSLGLISDAFHMLFDCTALAVGLYAAVVAKSKPTRAFSYGYGRMEVLSGFVNGVFLVLISFFVFSEAIDRIFDPPEMNTDRLLIVSVGGFCVNLVGIFAFSHAHSHGGGGGGGGGHGHSHGGDPHGHADGGECSGGHGHEDEHHHAHDAHAHGGGGECSGHGEGRNANIEGVFLHILADTLGSVGVIVSSLLIDFFGWKVADPICSIFIATLIFLSVIPLLRQSSAVLMLRTPSHMEKSLKDALYRVSCLEGVARVSRAHFWEHTGDMTVGLVHVTVHHGSPVSDHKVSSQIAQMFKERGITEITVQVDRDPVGAAAAQHEHGNLPTFAYPTLPSIHSAPAQSHPHAHHHQHQQQQAPQPLQSHQPPPPQQQQQQQHHGHSHAHGACHGHS* # PASA_UPDATE: g13092.t1, single gene model update, valid-1, status:[pasa:asmbl_9024,status:3], valid-1 NODE_716_length_18707_cov_44.4243 . gene 14914 16375 . + . ID=g13092;Name=g13092.t1 NODE_716_length_18707_cov_44.4243 . mRNA 14914 16375 . + . ID=g13092.t1;Parent=g13092;Name=g13092.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 14914 15126 . + . ID=g13092.t1.utr5p1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . exon 14914 15313 . + . ID=g13092.t1.exon1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . CDS 15127 15313 . + 0 ID=cds.g13092.t1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . exon 15435 15571 . + . ID=g13092.t1.exon2;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . CDS 15435 15571 . + 2 ID=cds.g13092.t1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . exon 15735 15797 . + . ID=g13092.t1.exon3;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . CDS 15735 15797 . + 0 ID=cds.g13092.t1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . exon 16177 16375 . + . ID=g13092.t1.exon4;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . CDS 16177 16236 . + 0 ID=cds.g13092.t1;Parent=g13092.t1 NODE_716_length_18707_cov_44.4243 . three_prime_UTR 16237 16375 . + . ID=g13092.t1.utr3p1;Parent=g13092.t1 #PROT g13092.t1 g13092 MDGKEGDDHGEQPTATAEQAASTDAAKDAPKDAAPPKGSEEAEGGEPTKVNSLGVKPPVKDKVIVRFRAAGNAPVMKQNKFKITASEKFQTVIDFLKKQLKFKPADSLFLYINQAFSPAPDEIVRNLYQCFEVDGKLDIHYCTTPAWG* # PASA_UPDATE: g13087.t1, single gene model update, valid-1, status:[pasa:asmbl_9019,status:12], valid-1 NODE_716_length_18707_cov_44.4243 . gene 238 1285 . - . ID=g13087;Name=g13087.t1 NODE_716_length_18707_cov_44.4243 . mRNA 238 1285 . - . ID=g13087.t1;Parent=g13087;Name=g13087.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 1133 1285 . - . ID=g13087.t1.utr5p1;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . exon 968 1285 . - . ID=g13087.t1.exon1;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . CDS 968 1132 . - 0 ID=cds.g13087.t1;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . exon 546 818 . - . ID=g13087.t1.exon2;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . CDS 546 818 . - 0 ID=cds.g13087.t1;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . exon 238 384 . - . ID=g13087.t1.exon3;Parent=g13087.t1 NODE_716_length_18707_cov_44.4243 . CDS 238 384 . - 0 ID=cds.g13087.t1;Parent=g13087.t1;3_prime_partial=true #PROT g13087.t1 g13087 MMASIAAGRCITTNSVVTNIFRGVSLKVRRISAPNIASIHSSAYADARLAWAASQGPFHAHSLRSARTIPLFERRSTITTVVTAHSGFLRAIVRAYATDVSATVTGGGASQSSARSPSQTGLKAVLKVYLKLSKPWLSTAVLVTTVAGYFFAPLPESRAGGLLSDRLSNAWTFTCTLVGTALCVFSANVINQILE # ORIGINAL: g13089.t1 original gene structure, not modified by PASA NODE_716_length_18707_cov_44.4243 AUGUSTUS gene 5353 6603 . - . ID=g13089;Name=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS mRNA 5353 6603 . - . ID=g13089.t1;Parent=g13089;Name=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 6292 6603 . - . ID=g13089.t1.exon1;Parent=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 6292 6603 . - 0 ID=cds.g13089.t1;Parent=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 5689 6156 . - . ID=g13089.t1.exon2;Parent=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 5689 6156 . - 0 ID=cds.g13089.t1;Parent=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 5353 5547 . - . ID=g13089.t1.exon3;Parent=g13089.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 5353 5547 . - 0 ID=cds.g13089.t1;Parent=g13089.t1 #PROT g13089.t1 g13089 MVFTASAFPPGGKGTARDSAFVVVKGMATALPTPGGFARPLYAASSLTRTDNQAIQHHVQRCRRDSGTTETDGGETTESDVEEWRRDAEAAAVLRIMALSGSDEDDYKQQSGQNTSDEGIGSRASTPPRTFHSAYYSITPATISTGKNRKRSRMDEDESPDNSVSGGSNPGSPTSASKRPKLHSCGSCSKTYTKSSHLETHLRTHTGERPFACTSEGCAKRFTRSDELTRHMRRHSGVKPFPCGVCGRFFTRSDHLSTHMRTHTGEKPFACSWQLCHRRFARSDELNRHVGTHQKRAMQGKAWPAPMSGQSVEMRLQSPGSADE* # ORIGINAL: g13093.t1 original gene structure, not modified by PASA NODE_716_length_18707_cov_44.4243 AUGUSTUS gene 16841 18542 . - . ID=g13093;Name=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS mRNA 16841 18542 . - . ID=g13093.t1;Parent=g13093;Name=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 18387 18542 . - . ID=g13093.t1.exon1;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 18387 18542 . - 0 ID=cds.g13093.t1;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 18039 18204 . - . ID=g13093.t1.exon2;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 18039 18204 . - 0 ID=cds.g13093.t1;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 17352 17897 . - . ID=g13093.t1.exon3;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 17352 17897 . - 2 ID=cds.g13093.t1;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS exon 16841 17187 . - . ID=g13093.t1.exon4;Parent=g13093.t1 NODE_716_length_18707_cov_44.4243 AUGUSTUS CDS 16841 17187 . - 2 ID=cds.g13093.t1;Parent=g13093.t1 #PROT g13093.t1 g13093 MSMSRAARAAARTLANVSSMRVASTVTPRTSMAAVATVRSVIAPRSTASITAVRGAKTLNFGGTKETVVERADYPKAKLHEIFGKDTMAVIGYGVQGRAQSLNMKDNGLNVIVGVRKDGDSWKLAQQDGWVPGKNLFGIEDAAEKGSVVMYLLSDAGQKDNWKKIEPKLTKGKTLYFSHGFSIVFKDQTSVVPPKGVDVILCAPKGSGTTVRSLFLNGQGINSSFAVFQDASGKAKERAMALGVAIGSGYLYETTFEKEVLSDLTGERGVLMGAIQGLFLAQYEVLREKGHSPSEAFNETVEEATQSLYPLIGKNGMDWMYANCSTTAQRGALDWYPEFYKASKPVFRKLYESVETGAETKRTLDVNSRPDVKERLERELKEIRESEMWQAGKTVRQLRPENQK* # PASA_UPDATE: g13088.t1, single gene model update, valid-1, status:[pasa:asmbl_9023,status:3], valid-1 NODE_716_length_18707_cov_44.4243 . gene 1519 4280 . + . ID=g13088;Name=g13088.t1 NODE_716_length_18707_cov_44.4243 . mRNA 1519 4280 . + . ID=g13088.t1;Parent=g13088;Name=g13088.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 1519 1655 . + . ID=g13088.t1.utr5p1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 1519 1802 . + . ID=g13088.t1.exon1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 1656 1802 . + 0 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 2000 2181 . + . ID=g13088.t1.exon2;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 2000 2181 . + 0 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 2324 2438 . + . ID=g13088.t1.exon3;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 2324 2438 . + 1 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 2723 2789 . + . ID=g13088.t1.exon4;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 2723 2789 . + 0 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 3030 3240 . + . ID=g13088.t1.exon5;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 3030 3240 . + 2 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 3402 3584 . + . ID=g13088.t1.exon6;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 3402 3584 . + 1 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 3749 3840 . + . ID=g13088.t1.exon7;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 3749 3840 . + 1 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . exon 4142 4280 . + . ID=g13088.t1.exon8;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . CDS 4142 4263 . + 2 ID=cds.g13088.t1;Parent=g13088.t1 NODE_716_length_18707_cov_44.4243 . three_prime_UTR 4264 4280 . + . ID=g13088.t1.utr3p1;Parent=g13088.t1 #PROT g13088.t1 g13088 MASNKRPFDGDESIFRALKQVRSGIHSTGKDAIVALAQNPFSSVSAALHQHDEAVNAQAASHSTAERQRLSEEISRLRRDIAELEDAVRRKEAESEETGSQSAADMQRIMGFLLRTSGMGFQASFLAEGDGGSEGAADGMRQQEMTSQLRSLATFTGIEFTDAHSQVKSSELLGTVRRYTVSGQTYDLPFTVIFDVDEPTVSADKSNGDASGNKQGRPRIMSVEPLLPPHASSELADFVQFVIAERALHTFFRGLVRYAELRMRRSRVFVGMKQRHPGHVGIPGGADGGDTMVVHDAEGRPGLKFMLSWKFALSRDGRVCPTMRLHAVATTAVRQADKTKTLANANKWMAQLVALRGLEFAIESLVACVSAR* # PASA_UPDATE: g13091.t1, single gene model update, valid-1, status:[pasa:asmbl_9022,status:12], valid-1 NODE_716_length_18707_cov_44.4243 . gene 13661 14658 . - . ID=g13091;Name=g13091.t1 NODE_716_length_18707_cov_44.4243 . mRNA 13661 14658 . - . ID=g13091.t1;Parent=g13091;Name=g13091.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 14635 14658 . - . ID=g13091.t1.utr5p1;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . five_prime_UTR 14482 14499 . - . ID=g13091.t1.utr5p2;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . exon 14635 14658 . - . ID=g13091.t1.exon1;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . exon 14385 14499 . - . ID=g13091.t1.exon2;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . CDS 14385 14481 . - 0 ID=cds.g13091.t1;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . exon 14105 14167 . - . ID=g13091.t1.exon3;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . CDS 14105 14167 . - 2 ID=cds.g13091.t1;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . exon 13661 13810 . - . ID=g13091.t1.exon4;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . CDS 13755 13810 . - 2 ID=cds.g13091.t1;Parent=g13091.t1 NODE_716_length_18707_cov_44.4243 . three_prime_UTR 13661 13754 . - . ID=g13091.t1.utr3p1;Parent=g13091.t1 #PROT g13091.t1 g13091 MDANYELNIRRFLVRSWRRQPVVFLSFVMAFVGVAAVAVGPGTTPNKRTLYFPRYTEETTDAGAPQATSKH* # ORIGINAL: g2790.t1 original gene structure, not modified by PASA NODE_8229_length_381_cov_29.1797_potentialcontaminant AUGUSTUS gene 66 367 . + . ID=g2790;Name=g2790.t1 NODE_8229_length_381_cov_29.1797_potentialcontaminant AUGUSTUS mRNA 66 367 . + . ID=g2790.t1;Parent=g2790;Name=g2790.t1 NODE_8229_length_381_cov_29.1797_potentialcontaminant AUGUSTUS exon 66 367 . + . ID=g2790.t1.exon1;Parent=g2790.t1 NODE_8229_length_381_cov_29.1797_potentialcontaminant AUGUSTUS CDS 66 367 . + 2 ID=cds.g2790.t1;Parent=g2790.t1 #PROT g2790.t1 g2790 RRQQTTTMQHHQQPVCLWHHHRRQKTTTQLHQQPVCLWHHQLLEQTTRTQHHQHRLCLRRHQRRQTTTTQLHQQPACLWQYQRRQTTRTQLHQQPVSLLH # PASA_UPDATE: g8090.t1, single gene model update, valid-1, status:[pasa:asmbl_2836,status:12], valid-1 NODE_1861_length_8859_cov_34.3553 . gene 86 3262 . + . ID=g8090;Name=g8090.t1 NODE_1861_length_8859_cov_34.3553 . mRNA 86 3262 . + . ID=g8090.t1;Parent=g8090;Name=g8090.t1 NODE_1861_length_8859_cov_34.3553 . five_prime_UTR 86 86 . + . ID=g8090.t1.utr5p1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 86 242 . + . ID=g8090.t1.exon1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 87 242 . + 0 ID=cds.g8090.t1;Parent=g8090.t1;5_prime_partial=true NODE_1861_length_8859_cov_34.3553 . exon 561 648 . + . ID=g8090.t1.exon2;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 561 648 . + 0 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 840 1051 . + . ID=g8090.t1.exon3;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 840 1051 . + 2 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 1235 1389 . + . ID=g8090.t1.exon4;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 1235 1389 . + 0 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 1522 1664 . + . ID=g8090.t1.exon5;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 1522 1664 . + 1 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 1824 1981 . + . ID=g8090.t1.exon6;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 1824 1981 . + 2 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 2161 2307 . + . ID=g8090.t1.exon7;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 2161 2307 . + 0 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 2566 2659 . + . ID=g8090.t1.exon8;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 2566 2659 . + 0 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 2851 2897 . + . ID=g8090.t1.exon9;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 2851 2897 . + 2 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . exon 3020 3262 . + . ID=g8090.t1.exon10;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . CDS 3020 3229 . + 0 ID=cds.g8090.t1;Parent=g8090.t1 NODE_1861_length_8859_cov_34.3553 . three_prime_UTR 3230 3262 . + . ID=g8090.t1.utr3p1;Parent=g8090.t1 #PROT g8090.t1 g8090 YIGDALAVRETAKTEYIQACKTAGVAPESLEGPAAFAVADTSVQGLIATGKTVNIRDRRNELGEVTVGLQELIMYGLKGMCAYAEHADVLGQYDPKLGAFLNESLAFLSSKDALVVDKLLAMALRVGENNFRAMELLDAGGTGTYGHPIPTKVNVQPVAGKAILVSGHDLKDLEDILKQTEGKGVNVYTHGELLPAHSYPGLKKHKHLVGNYGSAWQLQKFEFSKFPGPILMTSNCLVEPREGYKNRIFTHGPVGWPGVRHIAGNDYSAIVKQALEMPGFTETKTPQEITIGFGRNAVLSVADKVIDAVKSGAIKHFFVIGGCDGAEGERSYYTKLAKSLPKDHVILTLGCGKYRFNKNDFGSIGGIPRLLDVGQCNDAYSAIQIAAALSKAFNVGLNELPISFAISWFEQKAVAVLLTMLHLGIKNIRLGPTLPAFVPAPVLDVLIKNYGIGGTNEPAKDFKVFANSL* # ORIGINAL: g8091.t1 original gene structure, not modified by PASA NODE_1861_length_8859_cov_34.3553 AUGUSTUS gene 3988 8759 . - . ID=g8091;Name=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS mRNA 3988 8759 . - . ID=g8091.t1;Parent=g8091;Name=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 8320 8759 . - . ID=g8091.t1.exon1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 8320 8759 . - 2 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 7622 7909 . - . ID=g8091.t1.exon2;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 7622 7909 . - 0 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 7210 7402 . - . ID=g8091.t1.exon3;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 7210 7402 . - 0 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 6619 6796 . - . ID=g8091.t1.exon4;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 6619 6796 . - 2 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 5399 6112 . - . ID=g8091.t1.exon5;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 5399 6112 . - 1 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 4771 4995 . - . ID=g8091.t1.exon6;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 4771 4995 . - 1 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 4520 4580 . - . ID=g8091.t1.exon7;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 4520 4580 . - 1 ID=cds.g8091.t1;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS exon 3988 4227 . - . ID=g8091.t1.exon8;Parent=g8091.t1 NODE_1861_length_8859_cov_34.3553 AUGUSTUS CDS 3988 4227 . - 0 ID=cds.g8091.t1;Parent=g8091.t1 #PROT g8091.t1 g8091 GDLVISQNSKLQSLASLSALTKITGTLEISQSHPSLRVVDGPALLLSVSRLVLNGLDGPQSLAGLAALRTVINDVSIVSTSLTDIGDLAVVNTGGSFTVSSNPALKFFLSANALSRSVTGGADSITYGAVNFTSNVLACIPDSIFTVIVTPLKTVANNAPPTSSPCLVTSVSFTTLDAGNTVVATDMSNKLSTALNRSDWQTGDPKLAAFAANTILDKMLEIVTVALVTAALGPSSTLMVPEVSSGVFNSIDSVLSTTNIGVMRATKASNVLESVINKFSFAIAANAPCGNRENFEAANVFVKSIKESADNIGTLNFTNAQGGVTSFKVPSGLAQVSSIGAACVGSSFSVMTTDPFVPSSNATSLRPNSEIVTMTFDGVSISNLPSSNGFVFTVSLKDASTKDPICGFWNATSISWESSGCALISRVNASITCRCNHLTSFGVLFDTSTGADNAIPAADEKALSILTYIGCSMSIVGCFLTILTFVAIPRLRTVPTILVMNLCVALILVNMVYVIGIDKTSSTAGCKFVAILLQFGLLSAFSWMGLVGYNVWRNVVVVKMGDNPSKLSWKHYAFGWGLPAVFVIVCIIVDAGAKGSIDYGDDKRCWITSTGGLIGAFLVPVGIIIVCNIIIFALAIRSLRKAAKQRSFSMAGAESPDFVKDLLIYVSLLAILGCTWAFGYLGLIHYGFWYPFIILNCFQGVFIFCAYVLRARIYSAWHERLSSVASTFLSSGRSRASSANYSRSSGAGGDRGQSSTMEMTSVPGVIKTRLSVGDFADV* # ORIGINAL: g2604.t1 original gene structure, not modified by PASA NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS gene 837 2852 . + . ID=g2604;Name=g2604.t1 NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS mRNA 837 2852 . + . ID=g2604.t1;Parent=g2604;Name=g2604.t1 NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS exon 837 996 . + . ID=g2604.t1.exon1;Parent=g2604.t1 NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS CDS 837 996 . + 0 ID=cds.g2604.t1;Parent=g2604.t1 NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS exon 1198 2852 . + . ID=g2604.t1.exon2;Parent=g2604.t1 NODE_3523_length_3271_cov_61.2653_potentialcontaminant AUGUSTUS CDS 1198 2852 . + 2 ID=cds.g2604.t1;Parent=g2604.t1 #PROT g2604.t1 g2604 MRKEDAGQPSISSETLLQLFAPLRSEAERLLSLWEEKDVNMAQVEDSSCRVSVGTDGQNMKFNKDGGISAHVNDRDESFTAQTSPHVTYVAFAEELLLFFCAADADVANAIGACHITAMYPARSRVDAEWRVVIHCDGVTELPNLIAEGKRSGKLSAEFPLSQLVYLPNLYSDSRDPMALEPVSLPIYERMAAVVDEVCNDLFANHSNLLMVLGSSDNIVLVVRTTRFVPHLESEYPTNIRGFDVRTVEGPAWVHMTNEKIRFDTAACSKGGTSIGCNIGRLGDEMDGGTLTCFVRKRDCGGKLFALTNAHVVMRSTDASALRRFTGGLDVHEAKLRKEWTGLQEDFDKDDWEHPAFDYDYWTARAKDDGPVIVQPSNRAALRFSNAEVAQVGKVVDANYGSTCVTVGGSTLPVGIDAALFELSASVADPGCFVSDAYQFNEFELSPNIRLSSVVDVIGNGLKGTDDFIVFKYGAASGLTTGSFICHFGALRDSLSHEISHDDQFHFRDYLVTTRRPNVRRNQIVVRGPYDGMSQYEFMTNGDSGSLLWKATSTNEACALGQLYGGFNMGTYGLATPLRAILDEFKVDVVLSSPTTSGPSLSNE* # ORIGINAL: g7215.t1 original gene structure, not modified by PASA NODE_900_length_16052_cov_48.6814 AUGUSTUS gene 589 2498 . + . ID=g7215;Name=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS mRNA 589 2498 . + . ID=g7215.t1;Parent=g7215;Name=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS exon 589 768 . + . ID=g7215.t1.exon1;Parent=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS CDS 589 768 . + 0 ID=cds.g7215.t1;Parent=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS exon 1025 1171 . + . ID=g7215.t1.exon2;Parent=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS CDS 1025 1171 . + 0 ID=cds.g7215.t1;Parent=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS exon 1509 2498 . + . ID=g7215.t1.exon3;Parent=g7215.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS CDS 1509 2498 . + 0 ID=cds.g7215.t1;Parent=g7215.t1 #PROT g7215.t1 g7215 MDVVETAMDVRSLFDGVVDLGGADSVYTLRSMLCYYGRHYVAICVHEGVWYLFDDAQVKEIGRSWDHVIDKCIKGHFQPLLLYYCEQLASANPTKGRQRPSSVGVRVRSSANLMKIVSEPLLPPPPESRARAPVRPQPTTGSHAVAATPDLLGWTSPPEFSRISQPPSANATRSSGVTVGRRPSFERDSQRPRTHNGLNLIDDSQRSYSSDSLVQSDRERRVDSRPGDWWESHADPAPFGVTGPRDAASSYVPSAYASPPKRAPPPPPSSSSSATSLPANLSLTFPTSTGQRSMSDLTRALQMYGGSVAAAGNPLPYPPARSAATMGAPGATVFVPSYALPPSLFSETSESASFGAARPGYAGYRSQTDSRDSGCRAVEVTGDNRRMAHTAPDYGVGRRGSQVPSAGRLARCALCAAPVASGGELCPLCSEFGLHSRR* # PASA_UPDATE: g7216.t1, single gene model update, valid-1, status:[pasa:asmbl_9918,status:12], valid-1 NODE_900_length_16052_cov_48.6814 . gene 3317 6036 . + . ID=g7216;Name=g7216.t1 NODE_900_length_16052_cov_48.6814 . mRNA 3317 6036 . + . ID=g7216.t1;Parent=g7216;Name=g7216.t1 NODE_900_length_16052_cov_48.6814 . exon 3317 3389 . + . ID=g7216.t1.exon1;Parent=g7216.t1 NODE_900_length_16052_cov_48.6814 . CDS 3317 3389 . + 0 ID=cds.g7216.t1;Parent=g7216.t1 NODE_900_length_16052_cov_48.6814 . exon 3719 6036 . + . ID=g7216.t1.exon2;Parent=g7216.t1 NODE_900_length_16052_cov_48.6814 . CDS 3719 6036 . + 2 ID=cds.g7216.t1;Parent=g7216.t1 #PROT g7216.t1 g7216 MTETDPVAAGDETTAEKRPADDAADGDSSEKAKRRKRSRWGNEETRVHVPGFTTVLSQNMTSQQQEAYVTKLRIEEIGRKLKFNDLGIPAEQQDRSPSPEPIYDNYGKRLNTREFRCKKKLEDERHRLVEWLQKNDPDYKPPADYKPERKQIQQRVDIPQDEFPSINFIGLIIGPRGNTLKKLEGDTGAKVMIRGKGSVKEGRGRRDGQINPGEDEPLHAMVTGPTIEAVQKAVASIQKVIEVGKTCPEGQNELKRMQLRELASLNGTLRDDEGLRCMNCGSLEHRQWQCTEKKIFTNSAVCNTCGGVGHIARDCKFRGGAPPAIEGGSAGPAGGGAIDEEYSSFMQELSGDKRSSQSGPPGQSGQSGQVGQVGPPGGGSSGAPPPWQNKGPSSGGYPPSRPSNAYGPPQPRNDPPWQQGQQSAPRSSAPPPWQQSNNPPSQGGYSRAPPPWQSQPQSQPSSQAPSTNAPWLQSSQSSQASGQQSQSSGQPMMRPNANALPSWAVSGGSSTASTAAPQSNAGSAPSNQPAMLPTPVTQTPPSRAAYDSSSTYGAPSGGSYGGSGTPSAPTASGGYSGGYSSGGSSGGYSGSQGGYQSSQSTYSAPAPWQPSGGAWNAPPPSSGYSQPPPPSSGYSQPPPPSSGYSQPPPPSSGYTQPPPPSSGYSQPPPPSSGYSQPPPPSSGYSQPQPPSSGYSQPPPPSSGYSQPPPPPSTGYSSAGYSSSGYAGYSQPPPPSSGYSQPPPPSSGYSQPPPPSSGYSQPPPPSSGYSQPLPPSSGYSQPPPPPPSSYPPPPPSY* # ORIGINAL: g7218.t1 original gene structure, not modified by PASA NODE_900_length_16052_cov_48.6814 AUGUSTUS gene 15116 15894 . - . ID=g7218;Name=g7218.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS mRNA 15116 15894 . - . ID=g7218.t1;Parent=g7218;Name=g7218.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS exon 15825 15894 . - . ID=g7218.t1.exon1;Parent=g7218.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS CDS 15825 15894 . - 1 ID=cds.g7218.t1;Parent=g7218.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS exon 15116 15583 . - . ID=g7218.t1.exon2;Parent=g7218.t1 NODE_900_length_16052_cov_48.6814 AUGUSTUS CDS 15116 15583 . - 0 ID=cds.g7218.t1;Parent=g7218.t1 #PROT g7218.t1 g7218 SHSLGGAIDLIIEGTGNTLRIDKGKNRETVVYITNSGEEQSAPHLAGSPAAAPFTPRVTRATTSVTTTRKGTTFARSPSATQSLSTYGAAQNVNNANVNNATVNGTASSNDPSPTKSAVDVAVAGILSAISSGDADGSAAGVAGQAKERPAGYIPRNVSFVDTPSILSPKSDDSRSLH* # PASA_UPDATE: g7217.t1, single gene model update, valid-1, status:[pasa:asmbl_9919,status:3], valid-1 NODE_900_length_16052_cov_48.6814 . gene 6973 11695 . - . ID=g7217;Name=g7217.t1 NODE_900_length_16052_cov_48.6814 . mRNA 6973 11695 . - . ID=g7217.t1;Parent=g7217;Name=g7217.t1 NODE_900_length_16052_cov_48.6814 . five_prime_UTR 11513 11695 . - . ID=g7217.t1.utr5p1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 11497 11695 . - . ID=g7217.t1.exon1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 11497 11512 . - 0 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 11137 11293 . - . ID=g7217.t1.exon2;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 11137 11293 . - 2 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 10289 10912 . - . ID=g7217.t1.exon3;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 10289 10912 . - 1 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 9843 10017 . - . ID=g7217.t1.exon4;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 9843 10017 . - 1 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 9471 9549 . - . ID=g7217.t1.exon5;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 9471 9549 . - 0 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 8987 9180 . - . ID=g7217.t1.exon6;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 8987 9180 . - 2 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 8310 8733 . - . ID=g7217.t1.exon7;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 8310 8733 . - 0 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 7990 8147 . - . ID=g7217.t1.exon8;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 7990 8147 . - 2 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 7573 7815 . - . ID=g7217.t1.exon9;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 7573 7815 . - 0 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . exon 6973 7369 . - . ID=g7217.t1.exon10;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . CDS 7193 7369 . - 0 ID=cds.g7217.t1;Parent=g7217.t1 NODE_900_length_16052_cov_48.6814 . three_prime_UTR 6973 7192 . - . ID=g7217.t1.utr3p1;Parent=g7217.t1 #PROT g7217.t1 g7217 MSSRQDTSMRQAAVLSMLDLPQTHEHVAQHHVLTEDMFGIDTFNDRVMRAKLPKDTYRALHAMIKSGASMDNRLADIVANAMREWAIEKGATHFCHWFQPLTGKTAEKHDSFIEFSGDVLLLEFSGKQLIKGETDGSSFPSGGLRSTFEARGYTLWDPSSPAFIREGAYGKTLCIPTAFCSWGGEALDTKTPLLRSIAALQRETIPLLRLLGFEDVVGIHTNVGAEQEFFLIDRHFFVARPDLVACGRTLQGAEPAKGQSLQDHYFGSIHSRILAFLQESELILWKLGVPMKTRHYEVAPAQYEMAPIFEKVNIAVDHNMLVMQIMTEVALRHGLVCLLHEKPFANLNGSGKHNNWSVGAVTAMGEVSNLFEIHRRTEANAVRLNERFLVFLAATIRAVDMHADLLRISVSSNGQDLRLGGHEAPPAIMSVYLGKELDAMCRAIIGGVDARSHIVNHQEALDMGVAFLPELPKDTIDRNRTSPFAFTSNKFEFRAAGASQSLAFVNTVLNAAFADACVHIRTSIEARMKTGNNLETAVTAVVRETLTKHYRVVYNGDNYSYEWVKEAEGRGLLNLRTSPEALRLFDSPKNVELFERLAILSPNELQMWKVVAFETFDSMARIEGACLLDMARTIILPASMEHQRRMCKSVAAVKAIASADGSSLKAAVDRQQMECARTATLIAELLSTSQTLESTIAKFSGNNGKDLAQYAALATAMSAVRNACDTLETVVEDSLWQLPKYREILLLK* # PASA_UPDATE: g9750.t1, single gene model update, valid-1, status:[pasa:asmbl_6248,status:12], valid-1 NODE_3586_length_3156_cov_40.9461 . gene 1386 3042 . + . ID=g9750;Name=g9750.t1 NODE_3586_length_3156_cov_40.9461 . mRNA 1386 3042 . + . ID=g9750.t1;Parent=g9750;Name=g9750.t1 NODE_3586_length_3156_cov_40.9461 . five_prime_UTR 1386 1510 . + . ID=g9750.t1.utr5p1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . five_prime_UTR 1774 1786 . + . ID=g9750.t1.utr5p2;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 1386 1510 . + . ID=g9750.t1.exon1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 1774 1881 . + . ID=g9750.t1.exon2;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . CDS 1787 1881 . + 0 ID=cds.g9750.t1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 2012 2052 . + . ID=g9750.t1.exon3;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . CDS 2012 2052 . + 1 ID=cds.g9750.t1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 2234 2316 . + . ID=g9750.t1.exon4;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . CDS 2234 2316 . + 2 ID=cds.g9750.t1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 2485 2553 . + . ID=g9750.t1.exon5;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . CDS 2485 2553 . + 0 ID=cds.g9750.t1;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . exon 2917 3042 . + . ID=g9750.t1.exon6;Parent=g9750.t1 NODE_3586_length_3156_cov_40.9461 . CDS 2917 3042 . + 0 ID=cds.g9750.t1;Parent=g9750.t1 #PROT g9750.t1 g9750 MSDNLSLPDQPRSRVPSLSEQQQPRSRLPSLSKWISSYMPKTTYGQIERQDSVDQLSDLSTSLRGPGISFLVKYMGSEETAESKGKHIVSAAMDQLNMGLKNKKRFIMNISVAGIKLIDTDTQVVLTFHALRGCLCV* # ORIGINAL: g9749.t1 original gene structure, not modified by PASA NODE_3586_length_3156_cov_40.9461 AUGUSTUS gene 227 1047 . + . ID=g9749;Name=g9749.t1 NODE_3586_length_3156_cov_40.9461 AUGUSTUS mRNA 227 1047 . + . ID=g9749.t1;Parent=g9749;Name=g9749.t1 NODE_3586_length_3156_cov_40.9461 AUGUSTUS exon 227 1047 . + . ID=g9749.t1.exon1;Parent=g9749.t1 NODE_3586_length_3156_cov_40.9461 AUGUSTUS CDS 227 1047 . + 2 ID=cds.g9749.t1;Parent=g9749.t1 #PROT g9749.t1 g9749 PFPVGSQDGICPDVQNAAMLKSLQYRGTTRVVLSFVVDAIKSTDVAVFAAPGDPASSAITAGVFGFASPNNNDMSLVIHMNNGPDYSEKLKVPLESYTWYTLDVTFSKNWTSVSVYPGSSIEQAQTLRGNFDSSWADRFSVGVLTGHLADGYAGCAQNFRVDVPSYNPGGDLRCLGSSLVLIDADADRTILCDRDKNSGSIGCVVVDDMGNTFKFPNIGVDAPNPDHVAKSPSGAEYGVSMRGLHIRKNAQAVFELRAVWLCSGCGADLYLK* # ORIGINAL: g11444.t1 original gene structure, not modified by PASA NODE_1606_length_10218_cov_56.3267 AUGUSTUS gene 412 1743 . + . ID=g11444;Name=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS mRNA 412 1743 . + . ID=g11444.t1;Parent=g11444;Name=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 412 577 . + . ID=g11444.t1.exon1;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 412 577 . + 0 ID=cds.g11444.t1;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 744 841 . + . ID=g11444.t1.exon2;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 744 841 . + 2 ID=cds.g11444.t1;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 990 1070 . + . ID=g11444.t1.exon3;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 990 1070 . + 0 ID=cds.g11444.t1;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 1303 1451 . + . ID=g11444.t1.exon4;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 1303 1451 . + 0 ID=cds.g11444.t1;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 1644 1743 . + . ID=g11444.t1.exon5;Parent=g11444.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 1644 1743 . + 1 ID=cds.g11444.t1;Parent=g11444.t1 #PROT g11444.t1 g11444 VMGLVLATATEQGWPISSLSVTALARELVEHNVPAFAIRKCLSLYGEPAGELMEIDAAMRASEEDDVFTLPLESVCRFRAEELFKLHPRWRFPDFMESWSTKSPDGIIPTADLLKGLAIVEGTGEQAIILHFPVRDLPTEPQARFDRLFAAKPKWEHNEIAPYLQDIVHSKQPMDGLLLRYTRCSSEKNARMYNARY* # PASA_UPDATE: g11445.t1, single gene model update, valid-1, status:[pasa:asmbl_2124,status:3], valid-1 NODE_1606_length_10218_cov_56.3267 . gene 2135 4885 . - . ID=g11445;Name=g11445.t1 NODE_1606_length_10218_cov_56.3267 . mRNA 2135 4885 . - . ID=g11445.t1;Parent=g11445;Name=g11445.t1 NODE_1606_length_10218_cov_56.3267 . five_prime_UTR 4738 4885 . - . ID=g11445.t1.utr5p1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 4683 4885 . - . ID=g11445.t1.exon1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 4683 4737 . - 0 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 4465 4590 . - . ID=g11445.t1.exon2;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 4465 4590 . - 2 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 3388 4295 . - . ID=g11445.t1.exon3;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 3388 4295 . - 2 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 3020 3247 . - . ID=g11445.t1.exon4;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 3020 3247 . - 0 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 2722 2855 . - . ID=g11445.t1.exon5;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 2722 2855 . - 0 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 2478 2562 . - . ID=g11445.t1.exon6;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 2478 2562 . - 1 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . exon 2135 2324 . - . ID=g11445.t1.exon7;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . CDS 2163 2324 . - 0 ID=cds.g11445.t1;Parent=g11445.t1 NODE_1606_length_10218_cov_56.3267 . three_prime_UTR 2135 2162 . - . ID=g11445.t1.utr3p1;Parent=g11445.t1 #PROT g11445.t1 g11445 MAKMDGLDRIAVTSADIEDCLLLMNDLLTKCKSRDDAAVLQEAPKVIVILFERIMGVRLPEIIRSPKTFTENAHNCQAIIDRISQEVLREDMGHISGESVALGDTTSIIDLLEILNHIINIRMVDKRRKIADTKKSTTRRVSASSSSYSDSSDSEDDRRARRHEGVSRKPAAKVSYAKEVDIHRRRSHSDSDYSTSDSESYSSSSGSSRSSSSSHSSRSSSPSPHKYRGERRPRRSLTESPSFSEGSGSDTDSDAERERREREILRRNLRASRTVLLRELERKSGTASVTSVKPASSAKTGSPARLTRSPAATKDRDAVEAERVFPYLDVSDETIRKIVKRHSAEVLDSLRHERTRKNKKENEVDAAKQRQEALVSLMRKEAESTRRKHEKELLDKERRSIKSTERDERQKSVKLQKYADDYVLQHRSRMSAKTSREEMIFKRMLEDLLEVQKNRIREVRQESKEKKDKHEKEKKASLEALEKFYRDQYAILSEVLGQERREVDIQDKAKAEALRKMRRELKERMEGEIRKLQDKFFNADDAAHFRQKDADRVRHSVFPKHFPKY* # ORIGINAL: g11446.t1 original gene structure, not modified by PASA NODE_1606_length_10218_cov_56.3267 AUGUSTUS gene 5418 10015 . + . ID=g11446;Name=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS mRNA 5418 10015 . + . ID=g11446.t1;Parent=g11446;Name=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 5418 5532 . + . ID=g11446.t1.exon1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 5418 5532 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 5777 5878 . + . ID=g11446.t1.exon2;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 5777 5878 . + 2 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 6022 6082 . + . ID=g11446.t1.exon3;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 6022 6082 . + 2 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 6209 6369 . + . ID=g11446.t1.exon4;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 6209 6369 . + 1 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 6614 6705 . + . ID=g11446.t1.exon5;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 6614 6705 . + 2 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 6998 7207 . + . ID=g11446.t1.exon6;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 6998 7207 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 7446 7529 . + . ID=g11446.t1.exon7;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 7446 7529 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 7748 7798 . + . ID=g11446.t1.exon8;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 7748 7798 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 7967 8183 . + . ID=g11446.t1.exon9;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 7967 8183 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 8352 8450 . + . ID=g11446.t1.exon10;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 8352 8450 . + 2 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 8676 8778 . + . ID=g11446.t1.exon11;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 8676 8778 . + 2 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 9064 9157 . + . ID=g11446.t1.exon12;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 9064 9157 . + 1 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 9352 9732 . + . ID=g11446.t1.exon13;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 9352 9732 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS exon 9932 10015 . + . ID=g11446.t1.exon14;Parent=g11446.t1 NODE_1606_length_10218_cov_56.3267 AUGUSTUS CDS 9932 10015 . + 0 ID=cds.g11446.t1;Parent=g11446.t1 #PROT g11446.t1 g11446 MLTAKVEDVFGVDAATFFELFLAHEAFEQAYHKKLNHEEVKISPWEVVGDGFRRTIDFSTPFNGPAIIKKMLGKVSTTQVKATQFYSWSADKRELTYKQKNVIIGVPMADCFAVEETSIVTEDGSASCKFVSVARVEFTGRLPGAKGSIEKTMFKESENAQTVWNGLAKTTIDKHKGIATGPEDSGSIDSDREADATPEPSAGGKAAAPSPAEETHNQHTSAAGDKLIEVSIVSAQAVKPDEEKEYTEYVIEVKGPASKWSVKRRYRQFDSLNRSLHKRFGRKLKAQMPKKQVFGSMSASVVELRRKALEQYVRDVIANPDVGITDADIAAFLDLNNTWRAAADGDVRVLKLALDSLRGDINGRNEFGDTPLVCATSKGREDVSLMLIERGADVNGQGQAGESPLVGAATQGLEKTVIALIAKKALVECRDRVGGTPLYYAALNGHVNIVKLLIAAGADTNSQDKGGETPIYAASHQGHVDVVEALLQAGADPQFASIHADSASQDTAAAPQSTAGNLRAYGSALNSATPGTEVSAYSSQLIAAFIRAPPAETSDAARKLRAAVSLELELTRRLITAKFEAVGSQLGPGMDEARKNNASLKGLDVMSKRLASQVGRQ* # ORIGINAL: g13520.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 26551 27396 . - . ID=g13520;Name=g13520.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 26551 27396 . - . ID=g13520.t1;Parent=g13520;Name=g13520.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 26551 27396 . - . ID=g13520.t1.exon1;Parent=g13520.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 26551 27396 . - 0 ID=cds.g13520.t1;Parent=g13520.t1 #PROT g13520.t1 g13520 MLPDPPMLPPSALDLLLMPQSLPITQQRLQLLQQQQHQQQQLNHQQQSKQHQQQQPQLHQDQPKQPVSAPSDQMLQMQALQQQKLLASLTGFQSTPLRPASHLEKPSTMPAPLSIAPKTSVKRTLVKTESDEDLAAAARDATAANGGGSDSLGSKDLRDMSDEAIARLTREKRERNCAASTRFRMRKKQKFAELERTAGEMTDRCHALQMQVQKLESEVTYLKGLLTMVHTGHGSTGVTAATATTVIDLVASVRDQKSPLASAHSGEDGAPENGFGVGDSH* # ORIGINAL: g13514.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 423 6645 . + . ID=g13514;Name=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 423 6645 . + . ID=g13514.t1;Parent=g13514;Name=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 423 627 . + . ID=g13514.t1.exon1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 423 627 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 864 1369 . + . ID=g13514.t1.exon2;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 864 1369 . + 2 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 1690 1770 . + . ID=g13514.t1.exon3;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 1690 1770 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 1933 2067 . + . ID=g13514.t1.exon4;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 1933 2067 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 2245 2389 . + . ID=g13514.t1.exon5;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 2245 2389 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 2602 2709 . + . ID=g13514.t1.exon6;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 2602 2709 . + 2 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 2917 3043 . + . ID=g13514.t1.exon7;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 2917 3043 . + 2 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 3171 3267 . + . ID=g13514.t1.exon8;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 3171 3267 . + 1 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 3556 3612 . + . ID=g13514.t1.exon9;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 3556 3612 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 3878 4013 . + . ID=g13514.t1.exon10;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 3878 4013 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 4246 4451 . + . ID=g13514.t1.exon11;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 4246 4451 . + 2 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 4723 4797 . + . ID=g13514.t1.exon12;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 4723 4797 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 5054 5141 . + . ID=g13514.t1.exon13;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 5054 5141 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 5395 5477 . + . ID=g13514.t1.exon14;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 5395 5477 . + 2 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 5694 5812 . + . ID=g13514.t1.exon15;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 5694 5812 . + 0 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 6111 6254 . + . ID=g13514.t1.exon16;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 6111 6254 . + 1 ID=cds.g13514.t1;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 6525 6645 . + . ID=g13514.t1.exon17;Parent=g13514.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 6525 6645 . + 1 ID=cds.g13514.t1;Parent=g13514.t1 #PROT g13514.t1 g13514 MTRRSATGPDTAPVARNAAAVLAIELAMRPTPLVCTAVLARVFESTDAFPSGDDDRDDSTGYEGGGDGVAFVSQHQRPIHGEAHMSAGTRLEAADGGSDRRTLHSRTHTRVDRASGYESSFPAASSAPRQRRSSDGERDGSGHRSSARVFGAWEREKHGGPKGSGGAEDAEGTPSTSSPSALSLRALAGSLPLRGVRLADIKAAAHELTQNGDPDRLVLIVARVFSSPEELGQSFRKNPSLCAPNELPIDLAEVRAAYHLMAGLGNATVSGALVVATQHLVASLRLSALSDFPESSKPGFLHPFVVALENPLMMDPQHYAECVFGLCQTLAALPEPHAMRLASHWSTYDARALSWLLGVFQQLITVRVVSSVGEPMPHLDDWVAAATRCLGFIYKANEMEHRPNAQRLPHTEFYNDAVNEHVDVREDFRLWKSGEGFSFCDYPFMLDAPRKSELLKWENLVQMRQELQDAFFRAIFAGPQNPYLSLRISRKPPPEFKKQLRVQFVGEQGVDEGGVRKEFFQLIVREIFDEKYGMFAMDERSRLFWFRPNETDSDDEYELIGLVVGLAIYNSVILDLHLPLAAYKKLTGAAVGLPDLEVSHPDLARGLVHLLEFDGNVEEIFARSFQVSYERYGEHVTEDLVPGGAFIPVTSDNRREYVDRYVDWVLNKSVERQFTAFKRGFDYLFRPEEIELLVCGDKELDFDALEKATVYDGGFDEDHPVVRNFWDIAHSLDESQKRRLLAFATGSDRVPLGGLSKLQFIIAKNGPDSDRLPSAHTCFNVLMLCEYGTKDKLRERLLSAIENFEGFGML* # ORIGINAL: g13519.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 22409 26224 . - . ID=g13519;Name=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 22409 26224 . - . ID=g13519.t1;Parent=g13519;Name=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 26102 26224 . - . ID=g13519.t1.exon1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 26102 26224 . - 0 ID=cds.g13519.t1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 25935 26017 . - . ID=g13519.t1.exon2;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 25935 26017 . - 0 ID=cds.g13519.t1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 25815 25836 . - . ID=g13519.t1.exon3;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 25815 25836 . - 1 ID=cds.g13519.t1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 25572 25731 . - . ID=g13519.t1.exon4;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 25572 25731 . - 0 ID=cds.g13519.t1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 24769 25382 . - . ID=g13519.t1.exon5;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 24769 25382 . - 2 ID=cds.g13519.t1;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 22409 24646 . - . ID=g13519.t1.exon6;Parent=g13519.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 22409 24646 . - 0 ID=cds.g13519.t1;Parent=g13519.t1 #PROT g13519.t1 g13519 MPPPRKVRVFFADVPAEKLGPIKTLIDREIRAMDPNPEPELVFSTFFELDKLTDFVVWSDPTSSRKRRGHETTLSQRRTSRSMQMVEQARSNIQGQVTDRTAPPLWDVKTEEGRYYLAKGHGIHMWHAKDLFERHRLRRLQKYDQKSVAVPTKVNGGRKPQPMLARSFSASSASQPQLILYQGDYVKAEDVSGKYRPVAREFPLEVGTGRPSFPLLNLQSAMGCSPFGPGDDPRAGNDGDATGDSGSAPGDCGSSDGQSEPGALRDDGVPPDVPPLPRAGCNDENNAGSRAEGAMPAHTARSVSAKAGVEAPGALFLLKSGYCERCAVEFADHAHFNSDLHRRKSRPDARIATHADALTVASFVARHKLQLEKEATNASRRRKERKRLAKLTLATSNKRTEVVDVLPVAEQSATECQIMQTPPEMAAAPDITPEMDTAADTTPETPDAGTAPEMATVAPESKSACTITGNPACEGTRDSEAIGVLFATAIASEPANEEEWDAGYLAECHTGQWAQTASTPGFAEKKKSVSLSIPRAPLPIATPVSMRTTRTLAASAVAADTPVTPEVRCAAASTSTRRRPSNDGFLCASNPNPPMTPPLSAPPAKTPNSVRERLDAKKAKKSLRNASSALRSCSSPSNERDPFAFHYEESPPDLRTDQPRYATSRCRLGEASLSEEPASARPSVSPADTRPRNGGRVGLARDSLVSSPTNALSNANDALGAAGENRKRGKKNKSRPSNKMTPDTASKTPIYMSVAASTHAACVATTRRSKRRREEQPTPTAPYPDSTAGNAKRRRVETSSDVTSPTRGRRHPDEDALRTPVPCSHMSSEVSFPDVRDGSSPASFVGKRKAAMAAQDGVAKHVKSDNDVEHCFGGKKKWSEISSIRAGMDRLISSVRTDDHSSSKGERERERERREAQLRFGSIPDDSRDDCASGAAKRRRVEGVPASGDSDKENRGSRLRAVSAECVADISASSRKQRRAAAQLAVASAGHVYVPEKEAPDNTWGDTNITGAATGRKRQRKQQKQQKQQQQQQQQQPSKRISQSECARLRAESECILQDRHLQPRKQVLSAPGGDRQRR* # ORIGINAL: g13518.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 19052 21793 . - . ID=g13518;Name=g13518.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 19052 21793 . - . ID=g13518.t1;Parent=g13518;Name=g13518.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 20178 21793 . - . ID=g13518.t1.exon1;Parent=g13518.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 20178 21793 . - 0 ID=cds.g13518.t1;Parent=g13518.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 19052 20024 . - . ID=g13518.t1.exon2;Parent=g13518.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 19052 20024 . - 1 ID=cds.g13518.t1;Parent=g13518.t1 #PROT g13518.t1 g13518 MADTQLVPLGCGLFYIATDPCTGALIAEHFLLHGESTHFEQEDPVAVVASSLPHTELAGATADAMVQGPRVLASRPQFRTTAAQLGFACVSCAGTVRLACAASVADGAGVVRVLVVARLEHTCQLVAGGVRGAGAPGSRSPGGVRHVLCTPLVAHGEWAVLGAFDDDLGSVPSHEDGLVQQSMPMRIARGPAVCWSRGGAVHAWTPRWPSARCLASGDAVVGCVDARVFPSVSLASLAVVTSAGRALLVPLSCAHSPLSLPSADDLHVLPDVYAPVAVSVEVVSLSGRIHSMVFTRSAQACLFVDGCARHVITLPQLPQSVVMTAALLPGTPTFASVVTRGGLHVLLQWGVDGTRTVTLAPTHKDGATCLAACAVPCASGVCAVAVGMDDAGARPRFRVTAVTCRSARPVERQGPRQTQLAAHGAPPRHVTASLEARRSAGIAALSAASARRDGKRRLVLRSLAVVLSRAPADPRLARTSPLGLATVVASLARASATPPPAGEDGVLPRIVSVGCTFLRWMIILGRTIVFEAGLCNYGRTAISGLTIAAMQSCTEGVCPQSLVSDSSARSVSLEPHESACVTAACELRGFRCAGAHRISAVAVWSEADRPLCSREVAWLSLSLDDLLPGGRAAAGAQSLSPLANLPFPAASLHVTCASLRGPRLVGEHMLQALFGGDCTRQTSSASDGSVVAIGTCGGIFTPFVRVRVVPLPHSASQALVEVHAGSCEQLECALAAVIRRLPEGTRVLWRGRDDSVRVPARIVDSDGTGTPAGHRECSDCHDAALVDTLCIKPAHGAQRVAGLCREWSPVGRWVGEVESRLEREMDAMADVDIGAVSVGVECATDAAAAQLCSLIDFARPSL* # ORIGINAL: g13516.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 8904 11581 . - . ID=g13516;Name=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 8904 11581 . - . ID=g13516.t1;Parent=g13516;Name=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 11471 11581 . - . ID=g13516.t1.exon1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 11471 11581 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 11307 11367 . - . ID=g13516.t1.exon2;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 11307 11367 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 10981 11120 . - . ID=g13516.t1.exon3;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 10981 11120 . - 2 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 10658 10739 . - . ID=g13516.t1.exon4;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 10658 10739 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 10258 10520 . - . ID=g13516.t1.exon5;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 10258 10520 . - 2 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 9858 9947 . - . ID=g13516.t1.exon6;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 9858 9947 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 9538 9660 . - . ID=g13516.t1.exon7;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 9538 9660 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 9259 9432 . - . ID=g13516.t1.exon8;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 9259 9432 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 8904 9023 . - . ID=g13516.t1.exon9;Parent=g13516.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 8904 9023 . - 0 ID=cds.g13516.t1;Parent=g13516.t1 #PROT g13516.t1 g13516 MSKHARNNTASAVFTYHERKKLKYGTQKERIGKDSCRDFDACHLCLQFAVQPMCCPDGHIACRACVLSSLLQQKEEIARQEKHYHAKLKEFVAEEDSKMNQARQVLVDEFQRAQDSLLPVTHKNKTNALAEAAKASAPASAGLLRQPSSTSSAQTPSSHARSQSQSLVPRDASASASATDGMAENGNVVTAAGDGQPSLAASLDFESIAAHRKAEERLVVAAVIEKPKEIEKERQLPAFWLPSLTPAAKASMPQAPYKVTVCAATKHPLKLKQLFKVVFTPTPGGPMDARGKPDTSGAGGSNATERWICPSCIKSLSNNPKISIVRTCGHVLCSVCADKFCKNSGSCQACGTACKPDDVILLATEGTGFAGHGDNLVATRYTAAFQT* # ORIGINAL: g13515.t1 original gene structure, not modified by PASA NODE_307_length_27473_cov_40.5859 AUGUSTUS gene 7476 8250 . - . ID=g13515;Name=g13515.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS mRNA 7476 8250 . - . ID=g13515.t1;Parent=g13515;Name=g13515.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 7893 8250 . - . ID=g13515.t1.exon1;Parent=g13515.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 7893 8250 . - 0 ID=cds.g13515.t1;Parent=g13515.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS exon 7476 7762 . - . ID=g13515.t1.exon2;Parent=g13515.t1 NODE_307_length_27473_cov_40.5859 AUGUSTUS CDS 7476 7762 . - 2 ID=cds.g13515.t1;Parent=g13515.t1 #PROT g13515.t1 g13515 MAHARRPGPQQPRASLLKVVILGDGAVGKSSLMNRFVHNEFDAASRHTIGVEFLNKAIFANGEEFILQIWDTAGQERFRSLRTPFYRGADVCMLVFGVDDKKSFDALTTWKNEFLYYADVRENADAFPFLLVGNKIDLPNREIHREAAEAWCVENGGMPYIETSARDATNVDTAFYEIVRRVNRNEDVATEYNDTVDLAAPDTPAPPASRCGQC* # PASA_UPDATE: g13517.t1, single gene model update, valid-1, status:[pasa:asmbl_5525,status:12],[pasa:asmbl_5526,status:12],[pasa:asmbl_5527,status:12], valid-1 NODE_307_length_27473_cov_40.5859 . gene 12299 18964 . + . ID=g13517;Name=g13517.t1 NODE_307_length_27473_cov_40.5859 . mRNA 12299 18964 . + . ID=g13517.t1;Parent=g13517;Name=g13517.t1 NODE_307_length_27473_cov_40.5859 . five_prime_UTR 12299 12566 . + . ID=g13517.t1.utr5p1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 12299 12885 . + . ID=g13517.t1.exon1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 12567 12885 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 13152 13769 . + . ID=g13517.t1.exon2;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 13152 13769 . + 2 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 13882 13990 . + . ID=g13517.t1.exon3;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 13882 13990 . + 2 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 14296 14329 . + . ID=g13517.t1.exon4;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 14296 14329 . + 1 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 14577 14662 . + . ID=g13517.t1.exon5;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 14577 14662 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 14978 15176 . + . ID=g13517.t1.exon6;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 14978 15176 . + 1 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 15475 15663 . + . ID=g13517.t1.exon7;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 15475 15663 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 15934 16023 . + . ID=g13517.t1.exon8;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 15934 16023 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 16192 16284 . + . ID=g13517.t1.exon9;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 16192 16284 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 16509 16647 . + . ID=g13517.t1.exon10;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 16509 16647 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 17012 17082 . + . ID=g13517.t1.exon11;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 17012 17082 . + 2 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 17354 17521 . + . ID=g13517.t1.exon12;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 17354 17521 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 17786 17824 . + . ID=g13517.t1.exon13;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 17786 17824 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . exon 17957 18964 . + . ID=g13517.t1.exon14;Parent=g13517.t1 NODE_307_length_27473_cov_40.5859 . CDS 17957 18964 . + 0 ID=cds.g13517.t1;Parent=g13517.t1 #PROT g13517.t1 g13517 MSAEPGLDSRRGSLRGPPPTICLTGDGGDIPFDEAAVDDADNSRFSDAHSESCAESSSDSEDDVVTDSRAVTRDSATALDMKALRVDEKEKEKEKEKDKGSPRSSHEHVVFHSEMISARQLPTLDECQTAAHVVAATDPTEADAAPPVHIPEGMWIPPGKTQPVHIPEGMWIPPGKTQPVPRLTPRATLAPARTASKKKRAHSLTVDSESLREIAGQYNDGAAGQQSASGGSGLGSGSVSGGVLAAGSFGASTEQGGPSEDDAKAGVVPMYTLKPATVHKFAGYADVFPSLCAVCDKTILSWGKNHIGVKCKVCGYAVHGACVVFAKPKCRETNVEGSRPNISGPINVQHTDSSVFDKTARVTPSSLLFIRKRLELEVSRLPAHGMYRSVLEIYVTWLIEKAEKLIKVNVVPIEDLQSVFQQTLKTYERNGVERVTEDSAYESIAEFRRALHDSKFYSELQVDITLLGARDVAEEITLIDSRLYNSITRDECVLVLWTKKDKAERAPNIMAFINRFNALTLYVMTECLKKPTPKERSLVIHHFIKIATYCRELRNFNALKAIIAGLQSTPVFRLKRTWALVSSKARASFDDYSALMSEDSNSAHFREALNDLAKLKAPVPCIPFLGVFLTDLVYVHTAFSNTPDVSHQKSEEVFDQIRSYRIPYSFTSVFALRDYLASVTYKGEDENYSISLEREPKEDKRAVGTENSIESDHEGTAVSTVTVTPSGVMPSIVSQAQLYLNADPLGSAPSNDGRQSILQPQQWQSVQQLSVAPTSETALTPSGSRRKHKQSQSLSITSRFGLSHSSSDLTQISGGGASSIASEMMKSFKFFSGGSKKKEDKAAADKTMTMTHHQSLSSISARGDDAHVTDVSPMLVSGEAEFVVHARSRSADWDGSGSVESLASLDGGTEAGLRDHNSASVHSIDTVGASTVSQQPRAQLSRKGAARDVLDCGNSSPPAKELKVASSRKSPFGRSGSEKMVRKQHAERMNDAREKLEGAVRAHERVAMEARRLASGAGDSEDMFKRLLDLLDEEGRRLRQALSATAESSLAEV* # PASA_UPDATE: g2234.t1, single gene model update, valid-1, status:[pasa:asmbl_5157,status:3], valid-1 # PASA_UPDATE: g2234.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5156,status:12], valid-1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . gene 221 4519 . + . ID=g2234;Name=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . mRNA 221 4519 . + . ID=g2234.t1;Parent=g2234;Name=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . five_prime_UTR 221 587 . + . ID=g2234.t1.utr5p1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 221 862 . + . ID=g2234.t1.exon1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 588 862 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 1242 1302 . + . ID=g2234.t1.exon2;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 1242 1302 . + 1 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 1547 1696 . + . ID=g2234.t1.exon3;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 1547 1696 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2030 2144 . + . ID=g2234.t1.exon4;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2030 2144 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2410 2541 . + . ID=g2234.t1.exon5;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2410 2541 . + 2 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2721 2818 . + . ID=g2234.t1.exon6;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2721 2818 . + 2 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 3016 3147 . + . ID=g2234.t1.exon7;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 3016 3147 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 3440 3574 . + . ID=g2234.t1.exon8;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 3440 3574 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 4181 4519 . + . ID=g2234.t1.exon9;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 4181 4330 . + 0 ID=cds.g2234.t1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . three_prime_UTR 4331 4519 . + . ID=g2234.t1.utr3p1;Parent=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . mRNA 221 4519 . + . ID=g2234.t1.1.5b6be70b;Parent=g2234;Name=g2234.t1 NODE_2872_length_4879_cov_33.9819_potentialcontaminant . five_prime_UTR 221 223 . + . ID=g2234.t1.1.5b6be70b.utr5p1;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 221 382 . + . ID=g2234.t1.1.5b6be70b.exon1;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 224 382 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 738 862 . + . ID=g2234.t1.1.5b6be70b.exon2;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 738 862 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 1242 1302 . + . ID=g2234.t1.1.5b6be70b.exon3;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 1242 1302 . + 1 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 1547 1696 . + . ID=g2234.t1.1.5b6be70b.exon4;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 1547 1696 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2030 2144 . + . ID=g2234.t1.1.5b6be70b.exon5;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2030 2144 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2410 2541 . + . ID=g2234.t1.1.5b6be70b.exon6;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2410 2541 . + 2 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 2721 2818 . + . ID=g2234.t1.1.5b6be70b.exon7;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 2721 2818 . + 2 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 3016 3147 . + . ID=g2234.t1.1.5b6be70b.exon8;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 3016 3147 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 3440 3574 . + . ID=g2234.t1.1.5b6be70b.exon9;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 3440 3574 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . exon 4181 4519 . + . ID=g2234.t1.1.5b6be70b.exon10;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . CDS 4181 4330 . + 0 ID=cds.g2234.t1.1.5b6be70b;Parent=g2234.t1.1.5b6be70b NODE_2872_length_4879_cov_33.9819_potentialcontaminant . three_prime_UTR 4331 4519 . + . ID=g2234.t1.1.5b6be70b.utr3p1;Parent=g2234.t1.1.5b6be70b #PROT g2234.t1 g2234 MMMMLSLLLLLLLLLLLLLLSSSSLSLFFFVRCCCCCCCRFFSLFIPPTQLYKSIGSTEDRQMATDTCRESVTLLKNDGNLLPINPAALPNKRILVAGPSCNSLAFQTGGWSVHWQGALGDNEFPYGTTVLAGLTSLVNGSATITSVPGCDINGNTTPDQMQSLVTAAQQSDVAIVCVGEANYAERMGDIGNLLLPQGQQDVVNAIAGTNTPIVLVLLEGRPRILNGIAQKARSVVHGYLPGPDGGICLSEILLGVTNPSGRLPLSYPNQPDDLPVQYYHKFNEQPVNFEWEFGHGLSYTSFAYSNLRLNATTVAPGDYIQVTVTVTNTGARDGKEAVLLFLTDDYRRVTPEVRMLKGFEKIGPMAPGATLDVSFVLSTDDMAYYGIDTTRVIEEGTFTVAIGDQSTQFTLAFAS* #PROT g2234.t1.1.5b6be70b g2234 MVPLDTTFADNLIALVKSGDVPEDRVTVSASRILQLKKDMGLFSNAFPNKDSALYKSIGSTEDRQMATDTCRESVTLLKNDGNLLPINPAALPNKRILVAGPSCNSLAFQTGGWSVHWQGALGDNEFPYGTTVLAGLTSLVNGSATITSVPGCDINGNTTPDQMQSLVTAAQQSDVAIVCVGEANYAERMGDIGNLLLPQGQQDVVNAIAGTNTPIVLVLLEGRPRILNGIAQKARSVVHGYLPGPDGGICLSEILLGVTNPSGRLPLSYPNQPDDLPVQYYHKFNEQPVNFEWEFGHGLSYTSFAYSNLRLNATTVAPGDYIQVTVTVTNTGARDGKEAVLLFLTDDYRRVTPEVRMLKGFEKIGPMAPGATLDVSFVLSTDDMAYYGIDTTRVIEEGTFTVAIGDQSTQFTLAFAS* # ORIGINAL: g8602.t1 original gene structure, not modified by PASA NODE_122_length_37468_cov_40.7455 AUGUSTUS gene 26849 31934 . - . ID=g8602;Name=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS mRNA 26849 31934 . - . ID=g8602.t1;Parent=g8602;Name=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 31860 31934 . - . ID=g8602.t1.exon1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 31860 31934 . - 0 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 31362 31549 . - . ID=g8602.t1.exon2;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 31362 31549 . - 0 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 30862 31076 . - . ID=g8602.t1.exon3;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 30862 31076 . - 1 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 30417 30592 . - . ID=g8602.t1.exon4;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 30417 30592 . - 2 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 30035 30152 . - . ID=g8602.t1.exon5;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 30035 30152 . - 0 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 28243 29854 . - . ID=g8602.t1.exon6;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 28243 29854 . - 2 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 27684 27920 . - . ID=g8602.t1.exon7;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 27684 27920 . - 1 ID=cds.g8602.t1;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 26849 27545 . - . ID=g8602.t1.exon8;Parent=g8602.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 26849 27545 . - 1 ID=cds.g8602.t1;Parent=g8602.t1 #PROT g8602.t1 g8602 MIRGFLRERSFDAQYVMKNGTLTAEKLSIVVGGLPRVRTYFDQVTQEQNGTVVRLDGGQVVGYTPFDQRFNGEATKNLFNLAQYDAIGLGGSDFFSGPEAYAEGVGKNRIFEIVSSNMNFYGGPASASLNSIVKSTVILHKPLPDGRTVAIGVIGWDGVEGMCNTVKCSTSAVSVLLKDAVSSLNFAVQQLREKGVEHIVAICGWLSSQETAIAVASKVNHVDVFILSNYGLHYSNTPFDGMTQAQNAYPRVITTPNGNNALVVSVRGESLYVGRLDVTFQDGKPVAWSGDAHLLYSCDVSNAIECHNNDAESIAVLTTFEEELRGYGSAVIGRTTTLLDGTRERCRFVECTAGNFMADAIRTQLREQCTIVLVNGGAIRASIPKGNITFGQMQAMHPFSNVISTFEAPGIVITEALQNSVTFIPTDPTNETAAIAVTAQVTGTGRFLQISGIRIQVDPEKPLGRRVFRAEVLQTDGSWVELDPRTRYKVCSTDFIRLGGDGYTSLRDGALKAYDYGPTLDAVMRDYVVTLSNAGASVSETIEGRIRYVYNSDILPKVCARGCGRGTCVEYNICECEAGWAGDACNINTAAVGAASNTSGSPGTIAGAVVGSTVGLLCVAALVFSLLRRGKRKQLAQQTRMELEMIDAILHTPAIAEMEVPVESIELGDKIGEGEFGEVFKATLVRGAVRIVAAVKTFKVPVTLSAAEVQTARTSFMAEIELMLNIPPHTNVISILAVCTKAVPNCLVIEYACHRDLRHYVQEHEKDIGPAEMLAFCIDVARGLEHLENCQIVHRDVAARNCMVFAGPRLPSRAEASWQLSPAGCVVVRVGDFGLSRDASSGDYYLSKNRRKLPYRWIAPESLSKRLFTHATDVWGFGVTCWEVFSRGDRPYQGVANHEIADYLNSGRRLGQPAECPPGVFVTIESCWRKLPETRPRFSQLVLQLCKAMAAMQGLPTWSAVRDTYVEGDGTPRASHPQSRLSTFLKSHTVERRKSNQFAGDLNSGTVAEPRYAPDTSPRLSVRSLSLTPSVAVVVEKDTMEGRSSGTSAGLARVHNLSTPLSHSVHNVAVTLVEQTGGSTPPPPPLRRLETAPYLFLPVQVSEEI* # PASA_UPDATE: g8597.t1, single gene model update, valid-1, status:[pasa:asmbl_878,status:12],[pasa:asmbl_879,status:12], valid-1 NODE_122_length_37468_cov_40.7455 . gene 272 17039 . - . ID=g8597;Name=g8597.t1 NODE_122_length_37468_cov_40.7455 . mRNA 272 17039 . - . ID=g8597.t1;Parent=g8597;Name=g8597.t1 NODE_122_length_37468_cov_40.7455 . five_prime_UTR 16896 17039 . - . ID=g8597.t1.utr5p1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 16852 17039 . - . ID=g8597.t1.exon1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 16852 16895 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 16455 16533 . - . ID=g8597.t1.exon2;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 16455 16533 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 15639 15809 . - . ID=g8597.t1.exon3;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 15639 15809 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 15209 15315 . - . ID=g8597.t1.exon4;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 15209 15315 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 14683 14767 . - . ID=g8597.t1.exon5;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 14683 14767 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 14292 14537 . - . ID=g8597.t1.exon6;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 14292 14537 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 13799 13918 . - . ID=g8597.t1.exon7;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 13799 13918 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 13173 13430 . - . ID=g8597.t1.exon8;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 13173 13430 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 12651 12771 . - . ID=g8597.t1.exon9;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 12651 12771 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 12263 12393 . - . ID=g8597.t1.exon10;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 12263 12393 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 11968 12040 . - . ID=g8597.t1.exon11;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 11968 12040 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 11675 11769 . - . ID=g8597.t1.exon12;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 11675 11769 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 11318 11447 . - . ID=g8597.t1.exon13;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 11318 11447 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 11033 11127 . - . ID=g8597.t1.exon14;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 11033 11127 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 10800 10924 . - . ID=g8597.t1.exon15;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 10800 10924 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 10072 10240 . - . ID=g8597.t1.exon16;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 10072 10240 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 9798 9905 . - . ID=g8597.t1.exon17;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 9798 9905 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 9545 9652 . - . ID=g8597.t1.exon18;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 9545 9652 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 9178 9261 . - . ID=g8597.t1.exon19;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 9178 9261 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 8759 8858 . - . ID=g8597.t1.exon20;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 8759 8858 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 8225 8454 . - . ID=g8597.t1.exon21;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 8225 8454 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 7792 7950 . - . ID=g8597.t1.exon22;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 7792 7950 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 7413 7543 . - . ID=g8597.t1.exon23;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 7413 7543 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 6763 6982 . - . ID=g8597.t1.exon24;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 6763 6982 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 6314 6419 . - . ID=g8597.t1.exon25;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 6314 6419 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 5971 6110 . - . ID=g8597.t1.exon26;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 5971 6110 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 5674 5775 . - . ID=g8597.t1.exon27;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 5674 5775 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 5296 5362 . - . ID=g8597.t1.exon28;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 5296 5362 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 4875 5091 . - . ID=g8597.t1.exon29;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 4875 5091 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 4422 4587 . - . ID=g8597.t1.exon30;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 4422 4587 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 4090 4187 . - . ID=g8597.t1.exon31;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 4090 4187 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 3663 3756 . - . ID=g8597.t1.exon32;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 3663 3756 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 3096 3231 . - . ID=g8597.t1.exon33;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 3096 3231 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 2737 2833 . - . ID=g8597.t1.exon34;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 2737 2833 . - 2 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 2255 2423 . - . ID=g8597.t1.exon35;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 2255 2423 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 1911 2006 . - . ID=g8597.t1.exon36;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 1911 2006 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 1690 1782 . - . ID=g8597.t1.exon37;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 1690 1782 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 1450 1548 . - . ID=g8597.t1.exon38;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 1450 1548 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 1080 1309 . - . ID=g8597.t1.exon39;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 1080 1309 . - 0 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 813 936 . - . ID=g8597.t1.exon40;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 813 936 . - 1 ID=cds.g8597.t1;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . exon 272 398 . - . ID=g8597.t1.exon41;Parent=g8597.t1 NODE_122_length_37468_cov_40.7455 . CDS 272 398 . - 0 ID=cds.g8597.t1;Parent=g8597.t1;3_prime_partial=true #PROT g8597.t1 g8597 MAEEGKRAFAVKLQANRYTAAEARQKASLATQQSVEPVDNDASTSAQAPSAAPPTEVIDYEEVLLQKSALIEADKLKDILLVSNDELCIKTVGREYRTVRPPVPKETLDASDIESHIKICVDSSVTEWSIVDNKSGKYSRSREPVTPDFLPLQVFEIDVVEQERKEQEEKDKHKSAQDHLQAMFKSPGSPAPQKSLRVSQNTEGRKSPLPIHNILKQQTDETVAFEFGQLEHDGLHHELLNYVKGETERTNAKNRSQDRHQFFQMLMDTDGSDVVSDIERPDPEPYEEHVGRQILVECKELKFQLDEVEPYYAAMALYLVTDKVKKISETFHFDLNTPDIAGMLGAFAMHKEFPSIATQAIFSVTYPNAEIYLVIRIEKVLQGDIALCAEPYVKDAGNQKAAQKHRQVAGTFCSRLGNYRMPFAWGALPLFDLVETSEPGIKCPLFRQEGEKLSDDDLYKFLSEYRKGTMARKLKSIPGHLSLTIRELKETDEQLPGCLSPSLVPVKPFPESTANLRPIREIYEFHSTPVYAVASTYLHHLYVYPTSVNLGNRGATIKARNIACRAEIYDDDQKQATPLRCIYGKSSMTALTNNSTTAVTYHNKAPDFYEEVKIALPAKITARHHIRCQPPKKAHVPESVDTPIGYAWMPLLAPDGRLISEEHMLPIACELSPKYLADGPDIKWVDGKKPLFKVIAVPASTIISEDAAVNAFLQQSFVQLPADAAPKDEEPLVKAIQRLWSPDTQLQFVIQMLPQVLNQLIGIICRPSQNDVLAKEAFLAIVRIVSNVHSKDSVNRNPLINTYSSLVFSTPASKKSAHEEIIKQLIAVLKEGNLTTVSEVLKYLWFYFDIICKSMIQTLFRSGRHKLNRKERFPLLFQISLRTLVEMLSAENQRRTKTMVTVASRLNQSLAFFLRDLLAFMDRGFVFSMVQKHIEDSSRESDASGDTLMELKFEFLRILCSSEHYLALNLPVEEKLVAENLVVAIPECKKRHYLAGLLISEVTSLFDHPNKPIRKKAIRTLRDLIAKLDADDRLQTKEHKARIARLHFPVVPIVLDNFKKLVVHPEGDDSKVPVDAFDHEERRALLGVYLYILKHIDTELLRHWWKKEAVSRLWAMFDVLSVCVKAFDYPGKAKVANRQPNTSMLNASITSVDAKRALEETYTNIGSGRNLGRASIQAGVGTFRAVAAAKDSVRRFGTLKKGMQLASQPTKARDAAMDARLEGCICAESSLVGMDVLELFAMEHPEKLAPHGGGEGKPTIFMEKLFGLLLDFLRTNQGEKTLLHVFASLRSFLNKFPAVLFIGTNDFCADLTSAVLRHCNSGIVSTREQASAFMYLMIRKNTETTGRSFAKVKLQSTIALSRIVGSSEIVRGQCLQRALSTIAAYAAEDKAIATNSPFPSQVRDLCARLYTILRDTVRMKANDKDSDMLVDIMYRLAQGYANSPDLRVTWLENLAQYHKSTSNWAEAAQCTIHIAALVAEYLNIIDFKRGLPQGCASFQNISPNVLEESAVSEDVMPADGEGICESKLFSEDGLRNLLEQAISELEKAELYEVVNEVYKLLLPIYQKERAYGDLATAHRRLASIFDSIQAVTQSGKRLLGSYFRVGFYGAKLGELDGKEFIYKEPKITHLSEISLRLQGFYRKVFGDKFFEIIQDSNEVVVANLDPEKAYAQITFVEPYFDEYELKDRITQFERLHNLRRFIFDTPFTDSGKAHGSIDDQKKRKTILTVEAAFPYLKRRIQVIDRHVTVLSPIECAIEEIQGKAGELNQAVQLKPPNIKLLQM # ORIGINAL: g8603.t1 original gene structure, not modified by PASA NODE_122_length_37468_cov_40.7455 AUGUSTUS gene 33375 36347 . + . ID=g8603;Name=g8603.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS mRNA 33375 36347 . + . ID=g8603.t1;Parent=g8603;Name=g8603.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 33375 36347 . + . ID=g8603.t1.exon1;Parent=g8603.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 33375 36347 . + 0 ID=cds.g8603.t1;Parent=g8603.t1 #PROT g8603.t1 g8603 MGGTHDSKLKVKVPAMRKMAAIFFLLMSMAPSGTSGQYQVPKNFVCPDGTTPGCKKSEYLPPSEPHHSDHKRRDLTVRSTGPGRFECVDWECFPCSMNDFCVSPGVSTACFTGQNYNPVSFYFYGGFPEYMSRYGILRQTFNDEPGQSKCKYCPPGAMLRTQQDTLVCECADGFYTYDRTTVSADIGLPPPTVFTVEPNVYTVIKSLFSEDRLRQTSESLYRKSPTSECIPCPPGSMSQAGATSIDECRCKEGFFRSAEFKWSDPCRAIGRPPTPLAPRVTVLSDTEILVEWASTPDTNGPISKPYQLSINGAILYEGYNDTLIQTALTKTVDSLSPSTQYCIAIVASTDFGSSMGPQQCATTRPAGCKRYLSLPGSYMLPTGGDAPCPPGTYSDKCGARNCTACLPGLHQPNTSATSVTACKACPSGFKSALGAGECERCDSDVVCPRTSSHSARIKMAWNTVPPKSPLVRLQDNDVVATMPNAQPVVLNSGMTSGGLAVLWGGIFVVLAVAIILFVAMMCPSEEGDTKNAGACARIAATLSYVDFVFTSILRDIEVTVPIDTDDNILCAQVSTAEKVTDMEKQAAAVSRRRCEVRKVPSRRRATITVLYFAGILAAAGYLVGEWMNSRYVETRTVVPLYNAAGDVISPPPGLKFRIVLLGSQLSCADAKVTVRALDSYESQATSQPVVYGTSCTSNLTALALSDSGEYDDYAESDLHGCGVGGASCFAITLTPAPSVRIYRSQSVALQVASNASLPVWAQAMRVWVSVPSWVDGTDSWVSFGAPSPANSRAAVHSPEAGGLNSILSGQVFTAPVALSHAYLAYGGDVRSRGFELYLSGEPLAATAAEPTSFIAVTVPVSVAATQTRIDVVEQHSITDLLARIFSFVGAIGTATGVVLAIVFKWPSMRAWIQRTCWAPLCRRSSSATASVISGCSSLCAWICCKMRRYGCCGRYRKGDMHVDEEEGDWRLTEVSSAEDCDERTPLGLHL* # PASA_UPDATE: g8598.t1, single gene model update, valid-1, status:[pasa:asmbl_877,status:3], valid-1 NODE_122_length_37468_cov_40.7455 . gene 17635 18962 . + . ID=g8598;Name=g8598.t1 NODE_122_length_37468_cov_40.7455 . mRNA 17635 18962 . + . ID=g8598.t1;Parent=g8598;Name=g8598.t1 NODE_122_length_37468_cov_40.7455 . five_prime_UTR 17635 17763 . + . ID=g8598.t1.utr5p1;Parent=g8598.t1 NODE_122_length_37468_cov_40.7455 . exon 17635 18201 . + . ID=g8598.t1.exon1;Parent=g8598.t1 NODE_122_length_37468_cov_40.7455 . CDS 17764 18201 . + 0 ID=cds.g8598.t1;Parent=g8598.t1 NODE_122_length_37468_cov_40.7455 . exon 18456 18962 . + . ID=g8598.t1.exon2;Parent=g8598.t1 NODE_122_length_37468_cov_40.7455 . CDS 18456 18872 . + 0 ID=cds.g8598.t1;Parent=g8598.t1 NODE_122_length_37468_cov_40.7455 . three_prime_UTR 18873 18962 . + . ID=g8598.t1.utr3p1;Parent=g8598.t1 #PROT g8598.t1 g8598 MASHQELRRRRGTVCPLSIALFTVVAAHVCFDLVMGQCEVRTTPSDDLILTSAAGRSIALQNAASIELDAPVINIRDPQGYKMTLQSLVSMVVESQGNYTALLRQREADLSRLKALEDQVAKLQTTIEGLKKNGTATNEIAVNASLGILSCPADFVAVGSYCVYRTILSGAHYIPAMTVCGNLKASLCSADQMTFICARSRDNPSPTLPTVDLAFPDGEWFWTRDRVIAPWSGKVYNSGLVYRRQQADCTGAYIWAEESAAVYVQELNAIPVVAKARFMCCRGA* # ORIGINAL: g8600.t1 original gene structure, not modified by PASA NODE_122_length_37468_cov_40.7455 AUGUSTUS gene 23120 24475 . + . ID=g8600;Name=g8600.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS mRNA 23120 24475 . + . ID=g8600.t1;Parent=g8600;Name=g8600.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 23120 24475 . + . ID=g8600.t1.exon1;Parent=g8600.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 23120 24475 . + 0 ID=cds.g8600.t1;Parent=g8600.t1 #PROT g8600.t1 g8600 MGQVPKIDSDAITASILQFSMNAFKSPTSTLSISSCASSSDGNKGIDTPGYKHRRRERVTKAKVHKPCIPNALPQLHVAAYLQNQRLRPLTGATGASRAYSVLAMPIDSVAPELVPFRSRFEVLEVLGSGTFGVVSKAKDARRINSKHPDGPIVAVKEYCNGTNGTAELVSCLQEWTMSQHALTGAANHPHMHFIAEYHELLIYPGVCALSMRCYMTTLDKAVGHLFARSKMSSSVSAGSTAHLFSPKTSTWKRVWMGQLTHAVAYLHSIGIMHCDIKPNNVLVAADGTLRLTDFNSARFIARASPAHKYRLCLPYAPPEHMWECDLSPAGDVWALGCILLHFNGERFYRPAEEYGAEPLPGNKDAANAEEDSDIEWQSTVACYYRQLQGLLNVDVYRKYLFDKMHDEDANMNRKACEWIATAMELQCSIRAPAEQLLSMSYVSPFQPGDD* # ORIGINAL: g8599.t1 original gene structure, not modified by PASA NODE_122_length_37468_cov_40.7455 AUGUSTUS gene 20610 22150 . + . ID=g8599;Name=g8599.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS mRNA 20610 22150 . + . ID=g8599.t1;Parent=g8599;Name=g8599.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 20610 20918 . + . ID=g8599.t1.exon1;Parent=g8599.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 20610 20918 . + 0 ID=cds.g8599.t1;Parent=g8599.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 21059 22150 . + . ID=g8599.t1.exon2;Parent=g8599.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 21059 22150 . + 0 ID=cds.g8599.t1;Parent=g8599.t1 #PROT g8599.t1 g8599 MLGTASNLLRRRRGYTEEVRHELEHVLDDHPGMIPVTVLSGDAGAQATTRFSFHRRKSVGDGAGDGASEQPRLENKKFLVPATMNAKQLGLVIGNRLQLKPGKVLRLSPTRKTSVQITDAETMASLYSRYADNDGFLYITYRTTPEMRRRMSFDAGYQVLKERISSLSMSGAKAGLTSQSTGSTASSTSASRRRSLEEAKPHEARKVAEELRKTASHGSTMSQPNLDNLERQDSEWSQVSSKADTSTSDSWPSCTSEHGSSSDHDSPVSSASSGDSGDSGATEEQGSLKDSDESSLSEARSGTKAVVAVPDKNAIATVPDEDSKGAKERREKRAELRKSFSLQSGRSARGRLTHNRSWLHSGNDDDQSIPPYDVILAALDDDCSWRNALECESAIDEIARSMHKTSLLPDGRRHRQAAASVEGGRRMGTKSLSVPSLTAISEAENASIMRRRLSVHQQDPRLRIRI* # ORIGINAL: g8601.t1 original gene structure, not modified by PASA NODE_122_length_37468_cov_40.7455 AUGUSTUS gene 25769 26569 . + . ID=g8601;Name=g8601.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS mRNA 25769 26569 . + . ID=g8601.t1;Parent=g8601;Name=g8601.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS exon 25769 26569 . + . ID=g8601.t1.exon1;Parent=g8601.t1 NODE_122_length_37468_cov_40.7455 AUGUSTUS CDS 25769 26569 . + 0 ID=cds.g8601.t1;Parent=g8601.t1 #PROT g8601.t1 g8601 MGYTRNPKALQKRYRHTLRPDIKKGVWSDDERRRLLEGIVKYWRNWTAVAGHVGTGRTPCVCQITAKFALDPNCLSAVGWKRFTPDDDARLRIAVERHGRGDWDKVAEDVLGRSGSKLRMKYEQIIPQWMRVSYSPDVRASVRAFLRGDGNVESKLAAHFKDLDAAKGWDALELGMDEGSQVDWARVNGASGAERSAALDAVEKEIVPRVTTEEWKEGASAVWVPTWRWERPICAGRKAPIEAVANHPRIKGFVAVSGGNATSNIR* # ORIGINAL: g2497.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 19240 19443 . + . ID=g2497;Name=g2497.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 19240 19443 . + . ID=g2497.t1;Parent=g2497;Name=g2497.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 19240 19443 . + . ID=g2497.t1.exon1;Parent=g2497.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 19240 19443 . + 0 ID=cds.g2497.t1;Parent=g2497.t1 #PROT g2497.t1 g2497 MAVVIPSAKIRGNSLSSRFASFTCGTTAFCLTLATGIKGKLAAKYNYTGETVCDVFVDSHAASSEIE* # ORIGINAL: g2496.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 16545 17009 . + . ID=g2496;Name=g2496.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 16545 17009 . + . ID=g2496.t1;Parent=g2496;Name=g2496.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 16545 17009 . + . ID=g2496.t1.exon1;Parent=g2496.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 16545 17009 . + 0 ID=cds.g2496.t1;Parent=g2496.t1 #PROT g2496.t1 g2496 MDSVVPLAIARIFGYVLYTNYETGIEKEDKKCLTERARKMLKQFEEHYARKVFADHRLFARRMHKMFRYVGKLACAIRDKNKDEIDLYRSKSIKYVSTLQGMAHALNDVTLRSYYEKGLSELQTYLMATPVLSTRPGEETLSTRFCARAVCSPD* # ORIGINAL: g2493.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 12592 14491 . - . ID=g2493;Name=g2493.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 12592 14491 . - . ID=g2493.t1;Parent=g2493;Name=g2493.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 13736 14491 . - . ID=g2493.t1.exon1;Parent=g2493.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 13736 14491 . - 0 ID=cds.g2493.t1;Parent=g2493.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 12592 12981 . - . ID=g2493.t1.exon2;Parent=g2493.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 12592 12981 . - 0 ID=cds.g2493.t1;Parent=g2493.t1 #PROT g2493.t1 g2493 MALIFSDTHLGCDGSLKSLSYIIDDVCDDYPVEWVLIAGDLFDESVPLEQVYEEAANLFREFSRKHVNVEVLAIRGNHDGSGQTTGIDRLEAAGLLQIVHTGDGSPQMLCERVALYAFNYMFDDDFSHLINSIAWKRPVSPCVSILMMHQNITNYGGDGSFVRVEELPTWLDLVVLGNPHHFAKRTFPDRPTVLLQAGSTVITSLRKSEARPKYAHFFDARTRALTHIPVIVARKLVLLPNLRTLEADIDAQRFFVPWRWVLRSVPESLCAVVARRSMPEILCAVVARRSVPEILSAVVARRSVPEILCAVVARRSVPSMFSVSAIQTPHTDSARQCDESFFKRRGVANLMADECFINLEYNYGICRNDLAKKQTASHKTN* # ORIGINAL: g2495.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 16279 16503 . + . ID=g2495;Name=g2495.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 16279 16503 . + . ID=g2495.t1;Parent=g2495;Name=g2495.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 16279 16503 . + . ID=g2495.t1.exon1;Parent=g2495.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 16279 16503 . + 0 ID=cds.g2495.t1;Parent=g2495.t1 #PROT g2495.t1 g2495 MDAAKHKTAKALKCPKSASAKATNANAKSAAKPAGKAKSPKTPSETPKTPKTPTKSAKKPAAKPKTPTTKKAKT* # ORIGINAL: g2492.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 907 1554 . - . ID=g2492;Name=g2492.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 907 1554 . - . ID=g2492.t1;Parent=g2492;Name=g2492.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 907 1554 . - . ID=g2492.t1.exon1;Parent=g2492.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 907 1554 . - 0 ID=cds.g2492.t1;Parent=g2492.t1 #PROT g2492.t1 g2492 MWQLETTTADSTAATPSQPQRFAEAVSAGVKSTFDSVAKRYLYESLLADITSEFDRMPFATSGKSGYGRRSSNRKKKFTNCFILFSNRYRKLLRKRLPGAPNGALSIMLSRMWKVMPDSQKDEYRITAERMRQGEEMSTETFVGRGDDSRESSLEGRPVHLVPQGAVSPIVPSPPHVQTFHTGSNCGSISMQVIAAEHVVPGSHYWHWRVNVTLL* # ORIGINAL: g2494.t1 original gene structure, not modified by PASA NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS gene 15604 16104 . - . ID=g2494;Name=g2494.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS mRNA 15604 16104 . - . ID=g2494.t1;Parent=g2494;Name=g2494.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS exon 15604 16104 . - . ID=g2494.t1.exon1;Parent=g2494.t1 NODE_635_length_19890_cov_20.7117_potentialcontaminant AUGUSTUS CDS 15604 16104 . - 0 ID=cds.g2494.t1;Parent=g2494.t1 #PROT g2494.t1 g2494 MFESRRELLKLGHHKQLMRGVHVNKTTGTVESAALSRNYVDSIDCKTIMYSTGGGWDLRKNKPAKNQRMDHSYSKAFLRNMQTRHGANVLRSQLDCLRGFRRGEPAKPGYQFMGKYLVESCHVLKINKRSGRSVLHYAMLPKNRSSAVSSGGHTQWFLRRSKLSLL* # ORIGINAL: g4603.t1 original gene structure, not modified by PASA NODE_1734_length_9472_cov_37.7785 AUGUSTUS gene 2510 3241 . - . ID=g4603;Name=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS mRNA 2510 3241 . - . ID=g4603.t1;Parent=g4603;Name=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 3070 3241 . - . ID=g4603.t1.exon1;Parent=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 3070 3241 . - 0 ID=cds.g4603.t1;Parent=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 2821 2843 . - . ID=g4603.t1.exon2;Parent=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 2821 2843 . - 2 ID=cds.g4603.t1;Parent=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 2510 2707 . - . ID=g4603.t1.exon3;Parent=g4603.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 2510 2707 . - 0 ID=cds.g4603.t1;Parent=g4603.t1 #PROT g4603.t1 g4603 MAMSGHCHAAASGIPEVTWTPESSSAHYSLFLVDPDAPSRASHKMREWRHWAVVNIPGNDLTKGQTLTEYSGPTPPAGSGPHRYIFLLYKQPDVSAAHFEDIPPQRGQWHVGKFAKGDLVGGTFFFAENR* # ORIGINAL: g4605.t1 original gene structure, not modified by PASA NODE_1734_length_9472_cov_37.7785 AUGUSTUS gene 5867 8912 . + . ID=g4605;Name=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS mRNA 5867 8912 . + . ID=g4605.t1;Parent=g4605;Name=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 5867 5885 . + . ID=g4605.t1.exon1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 5867 5885 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 6055 6164 . + . ID=g4605.t1.exon2;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 6055 6164 . + 2 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 6436 6642 . + . ID=g4605.t1.exon3;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 6436 6642 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 6895 7023 . + . ID=g4605.t1.exon4;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 6895 7023 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 7536 7590 . + . ID=g4605.t1.exon5;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 7536 7590 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 7967 8160 . + . ID=g4605.t1.exon6;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 7967 8160 . + 2 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 8372 8533 . + . ID=g4605.t1.exon7;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 8372 8533 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 8700 8912 . + . ID=g4605.t1.exon8;Parent=g4605.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 8700 8912 . + 0 ID=cds.g4605.t1;Parent=g4605.t1 #PROT g4605.t1 g4605 MKRISMEEGLAMEIMKHFDKEHIKRLKSAFYDMGEGDGISLDQFVCVMQAHLPKVQSEEEERAVVGNLCEFFDEMDINGDQSLEWDEFVEFVVATGTSKTAGVNADDMAQVEYRPSSIVDTSSHKHSIERVEYFSKMDKLVALERSNIVKIYEPQNCRLEAELSAHKGSVVCCEYIPSHRTLATAAMDLSVNFWDANYNLTRRLRTNHTQYALRWADTSDILYSGDSTGAIHAWNYDNLQARAHLHRHDKAVMDLCSIPSLGILISASLDRSICVWDVVTWDIRNELEGHTKGVTSLAYMSDYHLLFSAGFEHDVLGWNPFIKNSIAKLQGHPCSLVALRAVPNSPRLISADKEGTVKVWDV* # ORIGINAL: g4602.t1 original gene structure, not modified by PASA NODE_1734_length_9472_cov_37.7785 AUGUSTUS gene 2 2237 . + . ID=g4602;Name=g4602.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS mRNA 2 2237 . + . ID=g4602.t1;Parent=g4602;Name=g4602.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 2 2237 . + . ID=g4602.t1.exon1;Parent=g4602.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 2 2237 . + 1 ID=cds.g4602.t1;Parent=g4602.t1 #PROT g4602.t1 g4602 IVKAAFNTVGIYETEIKTLKAQLASHTDQLRQFLDFETQRTQVAQRLAATTEDLERERREREDLEKRLQHLQSQLIGAGAASSSAGPTQASASGQPPNGGRSNGTVVDAGRSTTMGGVVIVYDADGEGAGAAGSDDDGDGLASSRHGGGGSNHRPAEVYQGKGPPGTSANLQEALQRMDEMAASLEMERVERKRLQREADELRRKASAFETTLQKREETLVRGQANLDAGTVTLTLSFGEAARWMLHGLGSEGGMATFTGKELVEWTMRNGGIAPDTARDVAQRLMDAGHLRRIDGRPRFSMRQQMSFHGVAMHEAAMAGDVDKLRKLVASSGPKLVDSRDSDGRTALMYAISSGREDCAKLLLECGASLVAKDKDKHTPLLWAVHTSQPKFVRLLMSRGADWRSMDARARTALHWCARNQDASCLRAIVECVKQGDGVRSADVNAGDDEGLTPLHWAAMYNGREQGKLLLSLGADAKATDIELKTPLHFAAASNGADLVKLLLGADDAKSRAPCDVRAITGHTPMHLACGGGAEVAVTCLLAHKPRPTLTLADDQGRTPLHYSSARGDAACVNRLVGAGADPWVVDSHGRTPRDYAEFFGPSNGDSSAFEKCARRLEEAEREWAKRGKGSRWRATPFVPSEMDYARAAGNASKRPQSLADSFSASFIADGGGDGGSFYGRARSVSPLPASLAVGYNSSTLGAPVGPKGGTCPACGRRAFMTPATPNIRAAALIPPDIPSSPPA* # ORIGINAL: g4604.t1 original gene structure, not modified by PASA NODE_1734_length_9472_cov_37.7785 AUGUSTUS gene 3560 4556 . - . ID=g4604;Name=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS mRNA 3560 4556 . - . ID=g4604.t1;Parent=g4604;Name=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 4488 4556 . - . ID=g4604.t1.exon1;Parent=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 4488 4556 . - 0 ID=cds.g4604.t1;Parent=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 4014 4092 . - . ID=g4604.t1.exon2;Parent=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 4014 4092 . - 0 ID=cds.g4604.t1;Parent=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS exon 3560 3660 . - . ID=g4604.t1.exon3;Parent=g4604.t1 NODE_1734_length_9472_cov_37.7785 AUGUSTUS CDS 3560 3660 . - 2 ID=cds.g4604.t1;Parent=g4604.t1 #PROT g4604.t1 g4604 MLSHPAASGGHSAKHQTQPWDTQFQQGCAHKMPLEAAAAAFKAEHIVGDVVPAFHPTTKLDVSYGGVHVTAGAHFTPKGKCI* # ORIGINAL: g219.t1 original gene structure, not modified by PASA NODE_2637_length_5580_cov_35.1639 AUGUSTUS gene 174 1289 . - . ID=g219;Name=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS mRNA 174 1289 . - . ID=g219.t1;Parent=g219;Name=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS exon 1268 1289 . - . ID=g219.t1.exon1;Parent=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS CDS 1268 1289 . - 0 ID=cds.g219.t1;Parent=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS exon 647 931 . - . ID=g219.t1.exon2;Parent=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS CDS 647 931 . - 2 ID=cds.g219.t1;Parent=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS exon 174 313 . - . ID=g219.t1.exon3;Parent=g219.t1 NODE_2637_length_5580_cov_35.1639 AUGUSTUS CDS 174 313 . - 2 ID=cds.g219.t1;Parent=g219.t1 #PROT g219.t1 g219 MAALVWLRSARLNEDNTSAFETASRHKHLETIDAGPLRERGTIDRHLFLDLCGSTVDAGRKSPKYPFNPDRRDQLVEGVLRSSIGFDNYFQRIFGYLHPDVSGSYIFAIACDDHCELWLGTDDRASSESLVAFVGAPSSSEGDEWTRPD # PASA_UPDATE: g13344.t1, single gene model update, valid-1, status:[pasa:asmbl_4639,status:3], valid-1 NODE_2605_length_5705_cov_39.5462 . gene 1624 5148 . - . ID=g13344;Name=g13344.t1 NODE_2605_length_5705_cov_39.5462 . mRNA 1624 5148 . - . ID=g13344.t1;Parent=g13344;Name=g13344.t1 NODE_2605_length_5705_cov_39.5462 . five_prime_UTR 5045 5148 . - . ID=g13344.t1.utr5p1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 5001 5148 . - . ID=g13344.t1.exon1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 5001 5044 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 4398 4692 . - . ID=g13344.t1.exon2;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 4398 4692 . - 1 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 4015 4149 . - . ID=g13344.t1.exon3;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 4015 4149 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 3571 3765 . - . ID=g13344.t1.exon4;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 3571 3765 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 3095 3298 . - . ID=g13344.t1.exon5;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 3095 3298 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 2546 2836 . - . ID=g13344.t1.exon6;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 2546 2836 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . exon 1624 2308 . - . ID=g13344.t1.exon7;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . CDS 2213 2308 . - 0 ID=cds.g13344.t1;Parent=g13344.t1 NODE_2605_length_5705_cov_39.5462 . three_prime_UTR 1624 2212 . - . ID=g13344.t1.utr3p1;Parent=g13344.t1 #PROT g13344.t1 g13344 MAGRLPACVIDNGTGYTKMGFAGNTEPQYIIPTSIGIKETAKVGDKSQQRVYKGLDDLDFHIGDEAVKNERTYATHYPIRHGIIDDWDLMERYWEQAIFKYLRAEPEDHYFLITEPPLNTPENREYTAEIFFESFNVPGLYIAVQAVLALAASWTSRQVNERTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPIAGRDITHFVQQLLRDREPQIPPEDSMEVAKRVKEQYSYVCPDIVKEFQKYDSEPDKWIKKYEGIHGVTKKPYSCDVGYERFLGPEIFFHPEFSNPDFETPISEVVDTVIQSCPIDVRRGLYKNIVLSGGSTMFKDFGRRLQRDVKRNVDARVARSEQLSGGRIKPKPIDVNVITHNMQRYAVWFGGSMLASTPEFYQVCHTKADYDEHGPSICRHNPVFGTMS* # PASA_UPDATE: g13343.t1, single gene model update, valid-1, status:[pasa:asmbl_4637,status:12], valid-1 NODE_2605_length_5705_cov_39.5462 . gene 252 1409 . + . ID=g13343;Name=g13343.t1 NODE_2605_length_5705_cov_39.5462 . mRNA 252 1409 . + . ID=g13343.t1;Parent=g13343;Name=g13343.t1 NODE_2605_length_5705_cov_39.5462 . exon 252 1409 . + . ID=g13343.t1.exon1;Parent=g13343.t1 NODE_2605_length_5705_cov_39.5462 . CDS 252 1355 . + 0 ID=cds.g13343.t1;Parent=g13343.t1;5_prime_partial=true NODE_2605_length_5705_cov_39.5462 . three_prime_UTR 1356 1409 . + . ID=g13343.t1.utr3p1;Parent=g13343.t1 #PROT g13343.t1 g13343 FPSVQVASQFSRVDRGPIYLCFLGLSLGIILCGVLLSPLMLAIVRRTRPSLYGQRASSSPYAKTAMHHAQRRKSTSTNARDLSTITFCFYLGFASIVGVPLRWWLGSMLGMDPFVWTAEFVVFHPTRLMLSGYWAMFVVLFIVALQLPSFAAHVARTRNIIVRKYFHALAVLMFVPGYILDPDFTRLAMGVALAGFVFVEFLRSARVPPFGISLNSFLSQYADARDAGPFILTHTYLLLGCAIPMWMEGVVGESSSLLPSAGLAGVLTLGVGDALASVVGTAYGRTRWRGTSKSIEGSLASLVGQLLVAVVVCSAHPACGIGLRERGPLRAVGEGFALLCGCVLEAVTDQIDNIVLPVYVFSLSCLI* # PASA_UPDATE: g4244.t1, single gene model update, valid-1, status:[pasa:asmbl_2229,status:3], valid-1 NODE_1645_length_10027_cov_41.2096 . gene 566 3228 . - . ID=g4244;Name=g4244.t1 NODE_1645_length_10027_cov_41.2096 . mRNA 566 3228 . - . ID=g4244.t1;Parent=g4244;Name=g4244.t1 NODE_1645_length_10027_cov_41.2096 . five_prime_UTR 3159 3228 . - . ID=g4244.t1.utr5p1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . exon 2725 3228 . - . ID=g4244.t1.exon1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . CDS 2725 3158 . - 0 ID=cds.g4244.t1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . exon 1396 2470 . - . ID=g4244.t1.exon2;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . CDS 1396 2470 . - 1 ID=cds.g4244.t1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . exon 748 1222 . - . ID=g4244.t1.exon3;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . CDS 905 1222 . - 0 ID=cds.g4244.t1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . exon 566 579 . - . ID=g4244.t1.exon4;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . three_prime_UTR 748 904 . - . ID=g4244.t1.utr3p1;Parent=g4244.t1 NODE_1645_length_10027_cov_41.2096 . three_prime_UTR 566 579 . - . ID=g4244.t1.utr3p2;Parent=g4244.t1 #PROT g4244.t1 g4244 MSARALRRLQEQQAQQQAVAGSEPQGLPAGDTDDEEDAPVHSSQRKNKKNGAVNPFDLLNEGADGAGGDAGDAGSSSDDGEGATREGKGVSASASAKRKKKKKAAKAKTAAKGKEREGSNDGATAVVDGEDEIDRTLREMNITITPSSDRESGASSRDAKSTQYGDSRPLLGIDTKFLSGDAEMRRIFGSRVVSEATAASARGRGAHGAVTKRAKTWFPTPKPTWPRTGRPGVSMEYLGSFDAGRDLRFELVHNAGYQEAQGRFLDAVDTLDPSSIAAVLNMHPYHVDALLQLSEICKMSGDPQLACDLIERALWAVETSFHAMFNLALGTCRLSYRRRENRGFFLALFRYAQFMSQRGCWRTALEYTRTLLSLDPEDDPLCALLMIDYLALRAGEHGFLCRLHSEWDAHRDLSLLPNFAYSIPLARFHLGDTETADAMLQKAIVSFPGVVPLLVTRCGVNWSSADSPYFLEAASASSSSHQSLRQLETLYVERAHSQWKEPEVLTWLQRNITLALKTVADGHPLVKSSAYSRATAYKGTPRNIHRHILISGAVPSIVLAALYSGKIQTFCADINCFSRMHLFWGICTFIIFVSSSCCRFEKCVRDAS* # ORIGINAL: g4245.t1 original gene structure, not modified by PASA NODE_1645_length_10027_cov_41.2096 AUGUSTUS gene 3510 4835 . + . ID=g4245;Name=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS mRNA 3510 4835 . + . ID=g4245.t1;Parent=g4245;Name=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 3510 3895 . + . ID=g4245.t1.exon1;Parent=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 3510 3895 . + 0 ID=cds.g4245.t1;Parent=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 4121 4324 . + . ID=g4245.t1.exon2;Parent=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 4121 4324 . + 1 ID=cds.g4245.t1;Parent=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 4622 4835 . + . ID=g4245.t1.exon3;Parent=g4245.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 4622 4835 . + 1 ID=cds.g4245.t1;Parent=g4245.t1 #PROT g4245.t1 g4245 MVSAPQISTERFVGGSDRPISRMFVSALLCMILWCHILPAVSSATATDSVSERAVSPSSATNDASTMVVASPALPSGTSAVSAPTATTTLASPTACDVVADGNTSAVIYAGCNMTSFNPNGPLVRCDNLPMEFITCDAPLDLTDNPALAESLGYGCVVYGGEKYASVQRTSVPCRALEGIECYGNRTFLVGGVPCIRYSGQHFPSTLLLSLFLGILGVDRFVLGHIATGVGKLITLGGVGVWWIVDIVLLCTGTLGPADGSSWVPFY* # ORIGINAL: g4246.t1 original gene structure, not modified by PASA NODE_1645_length_10027_cov_41.2096 AUGUSTUS gene 6970 7623 . - . ID=g4246;Name=g4246.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS mRNA 6970 7623 . - . ID=g4246.t1;Parent=g4246;Name=g4246.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 6970 7623 . - . ID=g4246.t1.exon1;Parent=g4246.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 6970 7623 . - 0 ID=cds.g4246.t1;Parent=g4246.t1 #PROT g4246.t1 g4246 MARTQYNKKVTEEKRLMKNKRRAFFAHLMIKNQVRGWKLKHLIATKGKILSGTRKIASLHLPIGRESTWADINKDIVAEIIAIDRQQQQQQQQQRVSSSDAVTSVSDRKDSELRNPSTLPEDILDCNTIDCSDTTDNEGIANGSHHNGDGSECGCLGDPAADMTEAVDSAVDVDFASLPIPAEKLSRTYVFIDLTFEDISLFQSAALGTIENPISLL* # ORIGINAL: g4247.t1 original gene structure, not modified by PASA NODE_1645_length_10027_cov_41.2096 AUGUSTUS gene 8174 9422 . - . ID=g4247;Name=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS mRNA 8174 9422 . - . ID=g4247.t1;Parent=g4247;Name=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 9231 9422 . - . ID=g4247.t1.exon1;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 9231 9422 . - 0 ID=cds.g4247.t1;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 8949 9068 . - . ID=g4247.t1.exon2;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 8949 9068 . - 0 ID=cds.g4247.t1;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 8584 8675 . - . ID=g4247.t1.exon3;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 8584 8675 . - 0 ID=cds.g4247.t1;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS exon 8174 8393 . - . ID=g4247.t1.exon4;Parent=g4247.t1 NODE_1645_length_10027_cov_41.2096 AUGUSTUS CDS 8174 8393 . - 1 ID=cds.g4247.t1;Parent=g4247.t1 #PROT g4247.t1 g4247 MSVGVLNVGYGTITLTNLGEQYRITFPDAYARSILTVPWVELGGKTTITCEKTGYQAHIEFHTKPTFGKPNKITCEVSQGNTEPFMRIFGEWNGIMYMKDNMTQETKVFIDTKALPIIRKQVPHYDEQEEFESRRLWKEVTEALRVGDVARATEFKMKLEERQRQEEKERKANNEVFQPALFNPTEDGWFYKTPLEGFQPPAASAVI* # ORIGINAL: g3039.t1 original gene structure, not modified by PASA NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS gene 340 773 . - . ID=g3039;Name=g3039.t1 NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS mRNA 340 773 . - . ID=g3039.t1;Parent=g3039;Name=g3039.t1 NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS exon 621 773 . - . ID=g3039.t1.exon1;Parent=g3039.t1 NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS CDS 621 773 . - 0 ID=cds.g3039.t1;Parent=g3039.t1 NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS exon 340 417 . - . ID=g3039.t1.exon2;Parent=g3039.t1 NODE_5380_length_879_cov_29.1318_potentialcontaminant AUGUSTUS CDS 340 417 . - 0 ID=cds.g3039.t1;Parent=g3039.t1 #PROT g3039.t1 g3039 MQLPPPSVEKSLILRTMSALRGMLDEADYFWRHFENYFFVFDQFARFGHLERVFLVEQRIVAEFVDIYMGDESCFPR # PASA_UPDATE: g8614.t1, single gene model update, valid-1, status:[pasa:asmbl_2392,status:12], valid-1 NODE_1703_length_9610_cov_62.4585 . gene 4234 6210 . + . ID=g8614;Name=g8614.t1 NODE_1703_length_9610_cov_62.4585 . mRNA 4234 6210 . + . ID=g8614.t1;Parent=g8614;Name=g8614.t1 NODE_1703_length_9610_cov_62.4585 . exon 4234 4836 . + . ID=g8614.t1.exon1;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . CDS 4234 4836 . + 0 ID=cds.g8614.t1;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . exon 4994 5408 . + . ID=g8614.t1.exon2;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . CDS 4994 5408 . + 0 ID=cds.g8614.t1;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . exon 5589 5646 . + . ID=g8614.t1.exon3;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . CDS 5589 5646 . + 2 ID=cds.g8614.t1;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . exon 5961 6210 . + . ID=g8614.t1.exon4;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . CDS 5961 6120 . + 1 ID=cds.g8614.t1;Parent=g8614.t1 NODE_1703_length_9610_cov_62.4585 . three_prime_UTR 6121 6210 . + . ID=g8614.t1.utr3p1;Parent=g8614.t1 #PROT g8614.t1 g8614 MSPSSESVFGNSTDHPNDKPKKSRKKSSAKSHVVGVVDDANVGSPRDDSRADLGGNFKSESGGPEPLYVSSSTHVESGAPALDVLPAEVAVDSTLTDDVESLCAMFPMLSVDAISRVHADCDGDVSACVEVLIGIAESSVEADYADSNVVRERTHSGTLDVGEKEGEWVSARTNSRPSKQPSRGKQTRGDRSESNIDRTAESQARSRKESSASVASGASDRHRSSSTSSSTSVDTPTHLPSSSKSEPLVSSDGRTHATSISTSATGGNASQQDSSIVLLREMYPNLSDMTIRDYLRVCQGDVSLCAERLLQLVDAVPPPQVRAPSKSSVEIDKEMRDMIVSRYALQEFDPSNPDPVPVQIDIGRVWKNEKKMIRYRGNRVVSTRGERISYELVNREERLAQMRAAEKENAA* # PASA_UPDATE: g8615.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2391,status:3], valid-1 # PASA_UPDATE: g8615.t1, single gene model update, valid-1, status:[pasa:asmbl_2390,status:3], valid-1 NODE_1703_length_9610_cov_62.4585 . gene 6323 9426 . - . ID=g8615;Name=g8615.t1 NODE_1703_length_9610_cov_62.4585 . mRNA 6323 9426 . - . ID=g8615.t1.1.5b6be70a;Parent=g8615;Name=g8615.t1 NODE_1703_length_9610_cov_62.4585 . five_prime_UTR 9341 9426 . - . ID=g8615.t1.1.5b6be70a.utr5p1;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 9171 9426 . - . ID=g8615.t1.1.5b6be70a.exon1;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 9171 9340 . - 0 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 8865 9060 . - . ID=g8615.t1.1.5b6be70a.exon2;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 8865 9060 . - 1 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 8432 8568 . - . ID=g8615.t1.1.5b6be70a.exon3;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 8432 8568 . - 0 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 8210 8243 . - . ID=g8615.t1.1.5b6be70a.exon4;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 8210 8243 . - 1 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 7756 7919 . - . ID=g8615.t1.1.5b6be70a.exon5;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 7756 7919 . - 0 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 7365 7477 . - . ID=g8615.t1.1.5b6be70a.exon6;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 7365 7477 . - 1 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 7015 7230 . - . ID=g8615.t1.1.5b6be70a.exon7;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . CDS 7178 7230 . - 2 ID=cds.g8615.t1.1.5b6be70a;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 6703 6802 . - . ID=g8615.t1.1.5b6be70a.exon8;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . exon 6323 6536 . - . ID=g8615.t1.1.5b6be70a.exon9;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . three_prime_UTR 7015 7177 . - . ID=g8615.t1.1.5b6be70a.utr3p1;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . three_prime_UTR 6703 6802 . - . ID=g8615.t1.1.5b6be70a.utr3p2;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . three_prime_UTR 6323 6536 . - . ID=g8615.t1.1.5b6be70a.utr3p3;Parent=g8615.t1.1.5b6be70a NODE_1703_length_9610_cov_62.4585 . mRNA 6323 9426 . - . ID=g8615.t1;Parent=g8615;Name=g8615.t1 NODE_1703_length_9610_cov_62.4585 . five_prime_UTR 9341 9426 . - . ID=g8615.t1.utr5p1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 9171 9426 . - . ID=g8615.t1.exon1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 9171 9340 . - 0 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 8865 9060 . - . ID=g8615.t1.exon2;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 8865 9060 . - 1 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 8432 8568 . - . ID=g8615.t1.exon3;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 8432 8568 . - 0 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 8210 8243 . - . ID=g8615.t1.exon4;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 8210 8243 . - 1 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 7756 7919 . - . ID=g8615.t1.exon5;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 7756 7919 . - 0 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 7365 7490 . - . ID=g8615.t1.exon6;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 7365 7490 . - 1 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 7015 7230 . - . ID=g8615.t1.exon7;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 7015 7230 . - 1 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 6703 6802 . - . ID=g8615.t1.exon8;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 6703 6802 . - 1 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . exon 6323 6536 . - . ID=g8615.t1.exon9;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . CDS 6444 6536 . - 0 ID=cds.g8615.t1;Parent=g8615.t1 NODE_1703_length_9610_cov_62.4585 . three_prime_UTR 6323 6443 . - . ID=g8615.t1.utr3p1;Parent=g8615.t1 #PROT g8615.t1.1.5b6be70a g8615 MTFGFVTIREGDKGIIVDRRNGKVELVEGPSRRFLFRADYTPLRRFFADQKEYLEVRHRNGIREHLAGPVSLYQNPIDHESIFVRNVITLDANEALVVYKQGGGENAVQRRIAYGPTLFVPQANEWLHEFSWHGSPDNDKTRKIPNALKFTKLRVIPDQFYYNVPDVRTSDDALLNAVKVMIFFELKDLEMMLVNTHDPIADFINALCADVIAFAATLTYEQFLEKTCMLNDLNCAPAASALDTTSRRSSIEDITLPICRECTIRLSNREQGFVWRRKQRRNPKRLRT* #PROT g8615.t1 g8615 MTFGFVTIREGDKGIIVDRRNGKVELVEGPSRRFLFRADYTPLRRFFADQKEYLEVRHRNGIREHLAGPVSLYQNPIDHESIFVRNVITLDANEALVVYKQGGGENAVQRRIAYGPTLFVPQANEWLHEFSWHGSPDNDKTRKIPNALKFTKLRVIPDQFYYNVPDVRTSDDALLNAVKVMIFFELKDLEMMLVNTHDPIADFINALCADVIAFAATLTYEQFLEKTCMLNDLNTYSQLCSRSKRIGYNITKVVYRGYHSANLQGMHDTAIESRTRLRLEAETEAQSQTLADMKLSKQMERARMEQSMEVDASEHSLKIQAQQAAHDLRCDHEQHEERLRQKSAEAAKEIEHLRLKNAEQLAFLDSLRNMGVDLTSYLVSQHVHPDKVYKVVGSHGDAAATQANVHIHDTA* # ORIGINAL: g10508.t1 original gene structure, not modified by PASA NODE_2276_length_6950_cov_43.0956 AUGUSTUS gene 186 2972 . - . ID=g10508;Name=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS mRNA 186 2972 . - . ID=g10508.t1;Parent=g10508;Name=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 1522 2972 . - . ID=g10508.t1.exon1;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 1522 2972 . - 0 ID=cds.g10508.t1;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 1225 1365 . - . ID=g10508.t1.exon2;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 1225 1365 . - 1 ID=cds.g10508.t1;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 868 981 . - . ID=g10508.t1.exon3;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 868 981 . - 1 ID=cds.g10508.t1;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 421 595 . - . ID=g10508.t1.exon4;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 421 595 . - 1 ID=cds.g10508.t1;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 186 290 . - . ID=g10508.t1.exon5;Parent=g10508.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 186 290 . - 0 ID=cds.g10508.t1;Parent=g10508.t1 #PROT g10508.t1 g10508 MSHSLRHYETDTAASQSRRERNEKLHKNRRLIHSWFVGEPATVVPTERRWLSEEDLHAKKGDTTTTDVIASSRIPQRPSSAASSPTHSPARSRRCPVPTEHSERKTGLGISGKKILKQGDREWLRDLDRIPTQTGPRVDYNPAHIGDGYTWASGTHRLDLGGGERSVAWNENANGNMRVSELEKMADRRLKSVLKRSKRLDTSLRDYKEKIESISSEVDAIKSGITKDRAYLRGGVDGPADDESCCSTCCDEIHDDERHALNERPSSRSSSPMRKEGRTSDAAAGCTHPGHASRCGHHVGRHSGHRADKLSRLENTLRESVGRLEGKADLVRSYHQQMDTFRNQLAEADGEIADMRNAMARMKEDEQRAKERVDAAETERKKYADMIGSVEDERERLINRVASLEEERDRLFDLATVRERDAALHAEYARRMERARDECESWRHAMQQRVKAKEIECTDRDTLIQTLQRQLKDSQEEARAARHRYKKLAHRDKSDRSVDVRQIEDARRHLKKELKTCKDELLRTKTELERREREASENAVLVDEARLQVQRYARERQSRDAELSAMQVRVRDLETAAESAREGGEAQTRSYATKLEDKTRELAQVRVELERTRAAVVRAEEQSRLNEVVANTKLASAEAEISQLQQGIQQYESIVAELKSQL # PASA_UPDATE: g10510.t1, single gene model update, valid-1, status:[pasa:asmbl_3918,status:12], valid-1 NODE_2276_length_6950_cov_43.0956 . gene 6687 6950 . - . ID=g10510;Name=g10510.t1 NODE_2276_length_6950_cov_43.0956 . mRNA 6687 6950 . - . ID=g10510.t1;Parent=g10510;Name=g10510.t1 NODE_2276_length_6950_cov_43.0956 . five_prime_UTR 6950 6950 . - . ID=g10510.t1.utr5p1;Parent=g10510.t1 NODE_2276_length_6950_cov_43.0956 . exon 6687 6950 . - . ID=g10510.t1.exon1;Parent=g10510.t1 NODE_2276_length_6950_cov_43.0956 . CDS 6779 6949 . - 0 ID=cds.g10510.t1;Parent=g10510.t1;5_prime_partial=true NODE_2276_length_6950_cov_43.0956 . three_prime_UTR 6687 6778 . - . ID=g10510.t1.utr3p1;Parent=g10510.t1 #PROT g10510.t1 g10510 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN* # ORIGINAL: g10509.t1 original gene structure, not modified by PASA NODE_2276_length_6950_cov_43.0956 AUGUSTUS gene 3743 6526 . + . ID=g10509;Name=g10509.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS mRNA 3743 6526 . + . ID=g10509.t1;Parent=g10509;Name=g10509.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS exon 3743 6526 . + . ID=g10509.t1.exon1;Parent=g10509.t1 NODE_2276_length_6950_cov_43.0956 AUGUSTUS CDS 3743 6526 . + 0 ID=cds.g10509.t1;Parent=g10509.t1 #PROT g10509.t1 g10509 MATNATNATNATDPATDNTNNTSAFVTTLVINLVICVVVVIVFEIVRCRIPFIYDARRRFVPPSKRFDVQSRRLFGWIPESIFTSTDEIFERCGLDAACVVLASNTALFICAVILLYGLIVLLPINIYGGMDLSSFSEIALSNVNEGSSLLWAHLISAYLFTGVSLAVLWKSHGQFVKMRQRHLSVMRCPSVRSILVTDIPRQLATTKRLFAHYDWVFPGEVESAWVSRPLNRLNRNVEKHDIAMRDLEHARAVAAAAAPEDEPPATRAYICCGKRTLLIPALREEVDARAEKVRMLRARYRDLDAKDVFEDESDDDGTQDQQDAKKSSRPSTGSQNQLKKENGEKSHGASRKTKQHRSGFVTFRSRRTASIAAQCVMSAHQFSMMAEAAPEPRAVVWENVSLTKAERVVRSLLLSAGFIALVLFWTIPVAFVASLTTLEELSARLPFLEPIVNSSPALKGFLQGFLPTLAYVIFFALLRPIILFMSQLEGARSKARLQTMLAGRLYAFYVCNGFIALTISGALFEKIDDIVSNPTSIASLLAESIPTQAAFFINLIMTRSLSGLSMKLLCIGPLIVSTIKLKWIAKTPRERFEAKLPSSLIIGVTYADILFVFCITIAYSTLNPVILIFAVTYFALLSGLVKLTVMRVHVPDHEGGGEAFPSFIDNMSIALIVYHVTLIGVLAIKHAGIQAGLTVPLPFLTMFAVTQWHDAFQRSSLHIALERTKGPVDGTGAPSTADELTGADNADDAAAVNPVTLGDVGALGSIFYETSGECISPYVHPSLLVDVLASTGNDKDFGPDPEVELSLLFADNESYSGDPRLRARSSFASSVSRSGGMSLSKSGTMQKRNSARAPIPSAMKSREEGETEPNVVVVSTDIGVASTIVEVVGDDDAAIGTREQGLSPAAHAYEPMEMDDRQGDQRGTTL* # PASA_UPDATE: g3239.t1, single gene model update, valid-1, status:[pasa:asmbl_7588,status:3], valid-1 NODE_475_length_23031_cov_42.4806 . gene 12945 22796 . - . ID=g3239;Name=g3239.t1 NODE_475_length_23031_cov_42.4806 . mRNA 12945 22796 . - . ID=g3239.t1;Parent=g3239;Name=g3239.t1 NODE_475_length_23031_cov_42.4806 . five_prime_UTR 22562 22796 . - . ID=g3239.t1.utr5p1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 22433 22796 . - . ID=g3239.t1.exon1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 22433 22561 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 21935 22033 . - . ID=g3239.t1.exon2;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 21935 22033 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 21486 21698 . - . ID=g3239.t1.exon3;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 21486 21698 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 20953 21252 . - . ID=g3239.t1.exon4;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 20953 21252 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 20265 20762 . - . ID=g3239.t1.exon5;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 20265 20762 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 19390 20100 . - . ID=g3239.t1.exon6;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 19390 20100 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 18646 19211 . - . ID=g3239.t1.exon7;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 18646 19211 . - 0 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 17825 18516 . - . ID=g3239.t1.exon8;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 17825 18516 . - 1 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . exon 12945 17655 . - . ID=g3239.t1.exon9;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . CDS 13211 17655 . - 2 ID=cds.g3239.t1;Parent=g3239.t1 NODE_475_length_23031_cov_42.4806 . three_prime_UTR 12945 13210 . - . ID=g3239.t1.utr3p1;Parent=g3239.t1 #PROT g3239.t1 g3239 MTSISLKINLVKTNTFKTMQFEGGLTVREVCKDIQNKAGDAGSAADHGLFWPDEDPKKGRWLEPGRTLNYYDLKAGDMLEYKKKHRPLRVKAVDGALKTVLVDDSLTVHELIRTVCEKFGIQNWDEFSLVAEGGIIKEESKQHMSDEEDDQKAKAKDAKRMADLKKKLHTDDEIAWLNHDKTLREQGVDETQVLILRKKFFFSDGNVDRNDPVQLNLLFVQTRDAILNGTHPVTEDEAVQMAAYICQINMGDHDPAKHRAGAVKLEELLPEEYRKVKGIEKRFFDEHRKLVAMTELNAKYRFIQLCRSLKTYGVTFFLVKEKEKGKNKLVPRLLGITRDSVMRVNEVTKEVIKTWPLTTIRRWAASPNSFTLDFGDYSESFYSVQTTEGEAISQLVAGYIDIIVKKKKDSDRKVNDDDDEMAVYEDSVGAARATAIQHLPSNMGYASEGGVALPGVVGRAGAGTAQLGRVGAQQLQYHNASVGQAGAVSGQGQIAGLSMAESGLGQAQRALMGNITNGFAAVTAATSELGVAASLPPLGTDPASIAWRQQTLEVAKQNVSSQLSAMTAATASVVTLTSGDPSTVDHTAVSSAVTTISTNLTELSKNAKMMAALVGDPALGDKVLEAARGLAGATGKLLTAVQTGTAESRMDLLNAAQAIGVSSSQLLAYMGEPDVDAAAQEELINMAKAVAAATTAMVTNAKNVAAKCDDPNLQNGVITATKGAAMSTQQLVACTKVVAPTINSPLCQDQLVEAVKFVGSSIDSLLSASEQGCRDEAVKSSLKSSAQVVREALEKLIEKSKEGGRSKGPSNDYEDACDLILATTEKLFGSMGNAAEMVKHAKALAQATSQLVNCIKGEAANERDPEAQKRLLAAAKSLADATAKLVLAAKDAATNPTDAAYQAKLRQAAEELRSATNAAASHAMKKKVLKKLEHAAKQTAAVTTQLIAASHGAASSNRNPASQQQLANSGKEMTEKIGRLINAVREHASNPDNASAQLDLINSAKEVLAPGAKLVAAAKAASPTVGDGGVALALNNFSKAATQALQDLKDAQAVASDACGSLEIDSAIQAVKQLGRDLGTAREAASAGKLMPLPGETAESCANELGATSKTVGSSMAQLLTAANQGNENYTGVAARDTSAALKILANAVRGVAATSKEKDVQDQILQAAQVVMDESARLIGEAKSAIGTGSNDPNKMQRLTNVAKAVSGALNQVVNCLPGQRDVDNCIKAIAKTTALLDAGSFPAGSGADFNSTQQSLTNAAAALSVCSNELLAASRGSPEELAAAARKFEKQHGELISVGMKLAGLTKDKAAQQELVTNLKGVSATSTKLLLSAKSMAADPNAPNIKNQLAMSARGVVDSINALLNVCSTAAPGQKECDNAIRNIQAAAQQLENPSEPVNEGSYFECLDSVMDKSRSLAQAIAQINSHSRAGDGDKIGESVTDASAAVTALTEAAAQAAYLVGVSDPYSTPAVPGLVDQNMFARALQGITDACDALLTPDATQQKILTSATVIAKHTSALCNACKAASTKTTNPVAKQQFVNFAKNVASTTAALVTDIKSLAGSLTDDNRAKCATTTKPLIEAVQSLVTYASSPEFASVPAKISPEARAAQQPLCGAGKGVIASSVLLLTSAKALAGNPKDASSQQLLLQHSKAVSEAIKALANGIKDHAPGQKECDEAISTISRALNDVDQASLAATVGSLPPREDSTLQGFQEQLVHSLKEIKDIVPKVSSAAKGEPQSLGHAVVAIANQFVPFVNAAVGAASRTTDKAKAEAMFDMVKTITESAMQLMYSAKESGGNQKAVGAHAKVDENVNDINEGIKDLFHTLETSKSDGDVSSTIMMEIQKATASVGSADQSTSLSFKQLQENILEEAKNLGRHAAKAVALSRTQPEDLLRNARDIAHSYAGVAAASRGILALTDNEEVRTSVETTVRDLGPACSQLAQSCATVQSSPENQATKKQLSDDARVVSERVAKVMAAVRASAKGVQACEQAMTAVVSLLGDLETMAMFANAGSLNPEDPKDTFNAHKEEILRMAKQLVDCTKNVAAGAAGSQEQLAAAAKGSVEAITRLAEACKLGATAITSNDINAQELLLNAIKDVASALNDLLGASKSASGQPVNDPSMDALKETARTLVSGISQLLKVVKSVEDETARGARAIESAMEGIVQEVKALESSDPPKRQATPEELVNITKAVTMSTAKMVAAGTSGKQEEIVGAANMARKAMVDLLQIAKGCASKPDVTSDQRSRVHETAKKAALEQKTLLQAVYQTLQGDKSAAAAKKQEVTESSKKVAGAVSAIVDVAKSLKGDWVDPDDPSVIAENELLAAAAAIEAAAKKLSELKPRERPREANEDLNFEEQILEAAKAIAAATSALVKAATVAQRELVQQGKVAITKGTAKYHEDAMWSDGLVSAAKGVAGATGALCEAANSAVQGDASQERLVSAAKSVAASTAQLVVACRVKAEPNSQAQSRLNTAASAVKRATDSLVTAASDAAVFQEQDVNVTVDQRFVGSIAAEMGAYEEILRKEKELEDARKKLAKLRQQKYQK* # PASA_UPDATE: g3236.t1, single gene model update, valid-1, status:[pasa:asmbl_7586,status:3], valid-1 NODE_475_length_23031_cov_42.4806 . gene 3667 4534 . - . ID=g3236;Name=g3236.t1 NODE_475_length_23031_cov_42.4806 . mRNA 3667 4534 . - . ID=g3236.t1;Parent=g3236;Name=g3236.t1 NODE_475_length_23031_cov_42.4806 . five_prime_UTR 4421 4534 . - . ID=g3236.t1.utr5p1;Parent=g3236.t1 NODE_475_length_23031_cov_42.4806 . exon 4267 4534 . - . ID=g3236.t1.exon1;Parent=g3236.t1 NODE_475_length_23031_cov_42.4806 . CDS 4267 4420 . - 0 ID=cds.g3236.t1;Parent=g3236.t1 NODE_475_length_23031_cov_42.4806 . exon 3667 4153 . - . ID=g3236.t1.exon2;Parent=g3236.t1 NODE_475_length_23031_cov_42.4806 . CDS 3909 4153 . - 2 ID=cds.g3236.t1;Parent=g3236.t1 NODE_475_length_23031_cov_42.4806 . three_prime_UTR 3667 3908 . - . ID=g3236.t1.utr3p1;Parent=g3236.t1 #PROT g3236.t1 g3236 MSAPPAYPGQQTTTVVVHEEGFMAKAKVLIPKMIMPLAILCCVFNFLAPGFGTIIAAFIVLCPCPASNPGMGIGLRIGSFITNLLMGCIQLALSLFIIGWVWSIVWGLAFVASSAESNKTTVITTTVHPVPV* # PASA_UPDATE: g3235.t1, single gene model update, valid-1, status:[pasa:asmbl_7585,status:12], valid-1 NODE_475_length_23031_cov_42.4806 . gene 169 3036 . - . ID=g3235;Name=g3235.t1 NODE_475_length_23031_cov_42.4806 . mRNA 169 3036 . - . ID=g3235.t1;Parent=g3235;Name=g3235.t1 NODE_475_length_23031_cov_42.4806 . five_prime_UTR 2976 3036 . - . ID=g3235.t1.utr5p1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 2964 3036 . - . ID=g3235.t1.exon1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 2964 2975 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 2762 2878 . - . ID=g3235.t1.exon2;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 2762 2878 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 2358 2430 . - . ID=g3235.t1.exon3;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 2358 2430 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 2017 2123 . - . ID=g3235.t1.exon4;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 2017 2123 . - 2 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 1619 1747 . - . ID=g3235.t1.exon5;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 1619 1747 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 1219 1349 . - . ID=g3235.t1.exon6;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 1219 1349 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 968 1024 . - . ID=g3235.t1.exon7;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 968 1024 . - 1 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 762 831 . - . ID=g3235.t1.exon8;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 762 831 . - 1 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 379 465 . - . ID=g3235.t1.exon9;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 379 465 . - 0 ID=cds.g3235.t1;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . exon 169 285 . - . ID=g3235.t1.exon10;Parent=g3235.t1 NODE_475_length_23031_cov_42.4806 . CDS 169 285 . - 0 ID=cds.g3235.t1;Parent=g3235.t1;3_prime_partial=true #PROT g3235.t1 g3235 MASKRTAAELSHDTPHAETKRARIDDDAARVVGVIGAPFSGGQPRGGVEQGTKYMREANIVDQIIELGWRVNDMGDLDLHEEIANDSFGNCKKPRTVGAACKKVYDAVSACAAQGQFVVTLGGDHSIGVGTVCGHASVRKDLCVIWVDAHADINTANGSLSGNMHGMPVAFALGIQNPSEVPGFEWCTPVLKTSDIVYIGLRDLDKAEKDLLKQHNIRAFSMYEVDKYGIGKVMEMALDHINPYRNRPIHISFDVDGLDPTVTPSTGTTVRGGLSFREGHFICEAAYETGLLRGIDIVEV # PASA_UPDATE: g3237.t1, single gene model update, valid-1, status:[pasa:asmbl_7587,status:3], valid-1 NODE_475_length_23031_cov_42.4806 . gene 6004 8065 . - . ID=g3237;Name=g3237.t1 NODE_475_length_23031_cov_42.4806 . mRNA 6004 8065 . - . ID=g3237.t1;Parent=g3237;Name=g3237.t1 NODE_475_length_23031_cov_42.4806 . five_prime_UTR 8021 8065 . - . ID=g3237.t1.utr5p1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . five_prime_UTR 7854 7859 . - . ID=g3237.t1.utr5p2;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 8021 8065 . - . ID=g3237.t1.exon1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 7745 7859 . - . ID=g3237.t1.exon2;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . CDS 7745 7853 . - 0 ID=cds.g3237.t1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 7427 7521 . - . ID=g3237.t1.exon3;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . CDS 7427 7521 . - 2 ID=cds.g3237.t1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 7007 7123 . - . ID=g3237.t1.exon4;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . CDS 7007 7123 . - 0 ID=cds.g3237.t1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 6651 6720 . - . ID=g3237.t1.exon5;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . CDS 6651 6720 . - 0 ID=cds.g3237.t1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . exon 6004 6550 . - . ID=g3237.t1.exon6;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . CDS 6444 6550 . - 2 ID=cds.g3237.t1;Parent=g3237.t1 NODE_475_length_23031_cov_42.4806 . three_prime_UTR 6004 6443 . - . ID=g3237.t1.utr3p1;Parent=g3237.t1 #PROT g3237.t1 g3237 MADSVKNVKLQSSDGLEASVEIEVAKMSETVKNMIEDLGVDSDDTAIPLPNVTGPILTKVIEYCRHHKDDPPPAEEDEAKEKRSDDIEAWDAEFCKVDQGTLFELILAANYLDIKPLLDLTCKTVANMIKGKTPEEIRKTFNIKNDFTPEEEEQVRRENEWCEEK* # ORIGINAL: g3238.t1 original gene structure, not modified by PASA NODE_475_length_23031_cov_42.4806 AUGUSTUS gene 9428 12652 . + . ID=g3238;Name=g3238.t1 NODE_475_length_23031_cov_42.4806 AUGUSTUS mRNA 9428 12652 . + . ID=g3238.t1;Parent=g3238;Name=g3238.t1 NODE_475_length_23031_cov_42.4806 AUGUSTUS exon 9428 12652 . + . ID=g3238.t1.exon1;Parent=g3238.t1 NODE_475_length_23031_cov_42.4806 AUGUSTUS CDS 9428 12652 . + 0 ID=cds.g3238.t1;Parent=g3238.t1 #PROT g3238.t1 g3238 MALARVAKAVQMVIGHSGQACAVNAIASLIDRLPGSAKNVLMLCEGVTHGANNPYHAEDVLTHSIAVAYHAHLNASARTDATERDVLVASLAGLFHDCGKPQTRQRKGKYVCFFGHAGYGSSLIHAVSDGLCGEFSLADADMAVLRLLVSTHMCLSFKGRPQPHLAARKATQVLQSLLASREDAHRFHSLAADLAAADAAGAVRTYALSDDHPASRPSSSTTTTVGIEGASAQSFNRAVFRVLGMAGSGKTTEAKRIVRAARDAGLTAEVVSRDVAAMRNGMRVARKTVGAERASLFASVGVTEEEVAAAVVDYERTANSTGRTYRVLRALSLTGTGDTQKTFVWMINSALERSQVVVVDTVQFLFAGNQLSKMLAGVSSHFSADTTLHAGVYCPSATFFGVQADALEHMHGVTHRTHVEEDTRAQYPVCATETDKAVTMDNPHIPLGICDPLVPAILDRIAASNAGQHTAVEMAEKCALAYLRGLMGRLGNNTTVQSACAEIECRLTPHRVKVSLQCLDQDGHLTQEADLPTIVTLGYVNNLKPTITAFRDLRGSAFIVDKVAASESTSPSTSLSTVPVLRVRQMKASLPIFDELRELMEKETAAIRALLATSRDAGETALRRMLGLDASAALDMEDTNILDNARGVLESDASAAGATGGAVSHPPLVCTAISASPKVDGSLAVLYLLDEHTAARCPKTVQGAVLAHVTVADGTRRAIVFGSKGTALAGQLMQDRVCESIIGSYGSVAAFVEAVTPLVVRLCAQWAHAEAWSLLFEAVPRDESSELATRYPHGAQFVMLAAAVQMDDTSPVAIVLPDKVLTTADSSLVCVRPISFTSIDEALDNLGAQIDAIAEDTHAARTAHPEGFVLTLGLQDGRSIMVKLKTSLYYVAHKVMARPTHTHKILESIRAHRTDDQVQRILAWFPHLSRYEGVSMALELLPPTLIQTLGSDDARLDRLHLHRQQLSEMVVKIEAHVCATYATHARVVAAKYLFTEYVPRLIDIVDDVLRPILAGAMVPANPFSSYTSASTPEKDVRVLSERFARSIVAEVKRNCELQAMAANALQADIKDAVA* # PASA_UPDATE: g7826.t1, single gene model update, valid-1, status:[pasa:asmbl_8032,status:3], valid-1 NODE_538_length_21581_cov_41.7083 . gene 8092 9318 . - . ID=g7826;Name=g7826.t1 NODE_538_length_21581_cov_41.7083 . mRNA 8092 9318 . - . ID=g7826.t1;Parent=g7826;Name=g7826.t1 NODE_538_length_21581_cov_41.7083 . five_prime_UTR 9276 9318 . - . ID=g7826.t1.utr5p1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . exon 9196 9318 . - . ID=g7826.t1.exon1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . CDS 9196 9275 . - 0 ID=cds.g7826.t1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . exon 8839 8971 . - . ID=g7826.t1.exon2;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . CDS 8839 8971 . - 1 ID=cds.g7826.t1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . exon 8619 8679 . - . ID=g7826.t1.exon3;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . CDS 8619 8679 . - 0 ID=cds.g7826.t1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . exon 8092 8228 . - . ID=g7826.t1.exon4;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . CDS 8179 8228 . - 2 ID=cds.g7826.t1;Parent=g7826.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 8092 8178 . - . ID=g7826.t1.utr3p1;Parent=g7826.t1 #PROT g7826.t1 g7826 MSWLPRFKLTQLTALAFNNVLNPLNRRHGASVFAKPRNHVEEIANYYAPVHKWKTVLTDARRDGFVFHEDEEYREDRASFMRRRGKAPPKKGQGKRNQKAQGGQKKK* # PASA_UPDATE: g7827.t1, single gene model update, valid-1, status:[pasa:asmbl_8033,status:12], valid-1 NODE_538_length_21581_cov_41.7083 . gene 10374 10845 . - . ID=g7827;Name=g7827.t1 NODE_538_length_21581_cov_41.7083 . mRNA 10374 10845 . - . ID=g7827.t1;Parent=g7827;Name=g7827.t1 NODE_538_length_21581_cov_41.7083 . five_prime_UTR 10808 10845 . - . ID=g7827.t1.utr5p1;Parent=g7827.t1 NODE_538_length_21581_cov_41.7083 . exon 10720 10845 . - . ID=g7827.t1.exon1;Parent=g7827.t1 NODE_538_length_21581_cov_41.7083 . CDS 10720 10807 . - 0 ID=cds.g7827.t1;Parent=g7827.t1 NODE_538_length_21581_cov_41.7083 . exon 10374 10542 . - . ID=g7827.t1.exon2;Parent=g7827.t1 NODE_538_length_21581_cov_41.7083 . CDS 10397 10542 . - 2 ID=cds.g7827.t1;Parent=g7827.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 10374 10396 . - . ID=g7827.t1.utr3p1;Parent=g7827.t1 #PROT g7827.t1 g7827 MALYDVRERVFEERRQDIVELRQRIASLQDAIKLEGKPPAPPSIFLRLCVFVVVLAVVALVIGALQTLTFYETVTPT* # PASA_UPDATE: g7828.t1, single gene model update, valid-1, status:[pasa:asmbl_8034,status:3], valid-1 NODE_538_length_21581_cov_41.7083 . gene 11065 14381 . - . ID=g7828;Name=g7828.t1 NODE_538_length_21581_cov_41.7083 . mRNA 11065 14381 . - . ID=g7828.t1;Parent=g7828;Name=g7828.t1 NODE_538_length_21581_cov_41.7083 . five_prime_UTR 14244 14381 . - . ID=g7828.t1.utr5p1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 14127 14381 . - . ID=g7828.t1.exon1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 14127 14243 . - 0 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 13701 13811 . - . ID=g7828.t1.exon2;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 13701 13811 . - 0 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 13462 13587 . - . ID=g7828.t1.exon3;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 13462 13587 . - 0 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 13030 13171 . - . ID=g7828.t1.exon4;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 13030 13171 . - 0 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 12572 12770 . - . ID=g7828.t1.exon5;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 12572 12770 . - 2 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 12111 12255 . - . ID=g7828.t1.exon6;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 12111 12255 . - 1 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 11829 11994 . - . ID=g7828.t1.exon7;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 11829 11994 . - 0 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 11412 11589 . - . ID=g7828.t1.exon8;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 11412 11589 . - 2 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . exon 11065 11191 . - . ID=g7828.t1.exon9;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . CDS 11086 11191 . - 1 ID=cds.g7828.t1;Parent=g7828.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 11065 11085 . - . ID=g7828.t1.utr3p1;Parent=g7828.t1 #PROT g7828.t1 g7828 MAAVGGAGTSEQPQLQSFSLAPEQELRFEVDGEKKVTLVLKRGTAEIFGTELAANKPYIFTSTKLAVFSWHGATIEVDGPTSVAYVSSETPMVSYVNVHHVLEQRRQDAARSGTLGPRVLIAGPVDVGKSTVCRILVNYAARMGHKPVYADVDIGQGSISLPGTIGAIQVERPIDVEEGYSTGAPLVYNFGHLTPSANASFFKMLVAKLSSKLEEKAATDASARVAGTIINTCGWIDGLGFTLLTHSIDTLKVDVVLVLDNERLFNELQNHVRRAGAATQVLRLAKSAGVVVRSVDYRRVSRNRRVREYFYGPTNDLSPSTLVIRFADLHLFKVGAPPVPLSMLPIGAAPVDNETKVTAVTPSMDLVHSVLALASDESDAKMPKADSNILGFVYVSDVDMAKGELTVLAPSPGRLPRKFLMYSQLKWME* # PASA_UPDATE: g7822.t1, single gene model update, valid-1, status:[pasa:asmbl_8031,status:12], valid-1 NODE_538_length_21581_cov_41.7083 . gene 154 977 . - . ID=g7822;Name=g7822.t1 NODE_538_length_21581_cov_41.7083 . mRNA 154 977 . - . ID=g7822.t1;Parent=g7822;Name=g7822.t1 NODE_538_length_21581_cov_41.7083 . five_prime_UTR 912 977 . - . ID=g7822.t1.utr5p1;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . exon 803 977 . - . ID=g7822.t1.exon1;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . CDS 803 911 . - 0 ID=cds.g7822.t1;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . exon 575 668 . - . ID=g7822.t1.exon2;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . CDS 575 668 . - 2 ID=cds.g7822.t1;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . exon 154 459 . - . ID=g7822.t1.exon3;Parent=g7822.t1 NODE_538_length_21581_cov_41.7083 . CDS 154 459 . - 1 ID=cds.g7822.t1;Parent=g7822.t1;3_prime_partial=true #PROT g7822.t1 g7822 MDLHSARTKFEDHLKKSQLFDMLEKKSGVPKLYIAMGGTFIFCFSLAVGFAAALLTNAVGFLYPAYCSFKAIESSNKDDDTRWLIYWVVFAFFNLIEYFTDILLTWIPFYYFAKLGILLFLMLPATDGANLIYFKFVRPYLTKHERQIDSAIRSGGREFADVSADLARE # PASA_UPDATE: g7829.t1, single gene model update, valid-1, status:[pasa:asmbl_8037,status:12], valid-1 NODE_538_length_21581_cov_41.7083 . gene 14901 18268 . + . ID=g7829;Name=g7829.t1 NODE_538_length_21581_cov_41.7083 . mRNA 14901 18268 . + . ID=g7829.t1;Parent=g7829;Name=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 14901 15213 . + . ID=g7829.t1.exon1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 14901 15213 . + 0 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 15421 15489 . + . ID=g7829.t1.exon2;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 15421 15489 . + 2 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 16021 16158 . + . ID=g7829.t1.exon3;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 16021 16158 . + 2 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 16319 16381 . + . ID=g7829.t1.exon4;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 16319 16381 . + 2 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 16692 16786 . + . ID=g7829.t1.exon5;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 16692 16786 . + 2 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 17168 17234 . + . ID=g7829.t1.exon6;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 17168 17234 . + 0 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 17399 17529 . + . ID=g7829.t1.exon7;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 17399 17529 . + 2 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . exon 17746 18268 . + . ID=g7829.t1.exon8;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . CDS 17746 17856 . + 0 ID=cds.g7829.t1;Parent=g7829.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 17857 18268 . + . ID=g7829.t1.utr3p1;Parent=g7829.t1 #PROT g7829.t1 g7829 MEENAFNDLSTRTGIFRSKLIEEFQLLDSLPDAGNVQAPVYNTKDIADNAIFQKLLRDVPNQLIKFQIFKRQANEGNSRTDRRLTRLRNLNFVPIGAWAKWLVDSDHYQTLMLVLICVNSILIGVQTELFTIIRDKRTSRGDFIFYSDRLIRLVVEEGLNELPYVEKAVVTPTGAEYKGVDFTTRLCGVSIMRAGEAMERGLRDCCRSVRIGKILIQRDESTKQPQLYYAKLPQDINTRYVMIMDPLLATGGTVCKAIEVILDHGVPEKNILFVSLIAAADGINLLVTRFPEVTIVVGQIDGGLDSEKYIVPGIGDFGERYFGTDDAQ* # ORIGINAL: g7825.t1 original gene structure, not modified by PASA NODE_538_length_21581_cov_41.7083 AUGUSTUS gene 7380 7589 . + . ID=g7825;Name=g7825.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS mRNA 7380 7589 . + . ID=g7825.t1;Parent=g7825;Name=g7825.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 7380 7589 . + . ID=g7825.t1.exon1;Parent=g7825.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 7380 7589 . + 0 ID=cds.g7825.t1;Parent=g7825.t1 #PROT g7825.t1 g7825 MAVSNAGMRTSAKFLGLVPALVAASIACAQPVAAGDIDGAGVFSIILGVSIGIVVILAGVGAYARNSRA* # PASA_UPDATE: g7823.t1, single gene model update, valid-1, status:[pasa:asmbl_8038,status:12], valid-1 NODE_538_length_21581_cov_41.7083 . gene 1305 3231 . + . ID=g7823;Name=g7823.t1 NODE_538_length_21581_cov_41.7083 . mRNA 1305 3231 . + . ID=g7823.t1;Parent=g7823;Name=g7823.t1 NODE_538_length_21581_cov_41.7083 . exon 1305 1909 . + . ID=g7823.t1.exon1;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . CDS 1305 1909 . + 0 ID=cds.g7823.t1;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . exon 2010 2087 . + . ID=g7823.t1.exon2;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . CDS 2010 2087 . + 1 ID=cds.g7823.t1;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . exon 2263 2447 . + . ID=g7823.t1.exon3;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . CDS 2263 2447 . + 1 ID=cds.g7823.t1;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . exon 2632 3231 . + . ID=g7823.t1.exon4;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . CDS 2632 2921 . + 2 ID=cds.g7823.t1;Parent=g7823.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 2922 3231 . + . ID=g7823.t1.utr3p1;Parent=g7823.t1 #PROT g7823.t1 g7823 MWLSSRAVVLMVLCALCVSSLCCSVDGRTVPACPSADALATDGSLHTDHVRFTGRCDRTNPSAVRFDWAGFTISAWFTGSSVAISLKDGLNFYNVLVDGFPICVLNATVDVTKRTYVLATGLDENVAHIVVLTKRTDPDVGAAEFHGVVLDKGAHLLDSSKHMDANPRRRIEFIGDSLTTGYGDEPVTVPCPFSPDTENNAIAWGSLIAKELNAEVHTESWSGYGISRHWGEHPPASALALPHVWAHALGTDNSTSWDFNEWRPHVVVVNLGTNDYWEPSTMPNDLFNLAYRGFVAQIMSAYESSNEQSLQVLLVCGPVCAGDCCATTRSVAASFEHSVSFVDISDSAHLNPEDIGCNGHPGPSGQQKMAAAVLPILRQLMQWDD* # ORIGINAL: g7824.t1 original gene structure, not modified by PASA NODE_538_length_21581_cov_41.7083 AUGUSTUS gene 3392 6896 . - . ID=g7824;Name=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS mRNA 3392 6896 . - . ID=g7824.t1;Parent=g7824;Name=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 6639 6896 . - . ID=g7824.t1.exon1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 6639 6896 . - 0 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 6115 6415 . - . ID=g7824.t1.exon2;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 6115 6415 . - 0 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 5586 5685 . - . ID=g7824.t1.exon3;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 5586 5685 . - 2 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 5415 5455 . - . ID=g7824.t1.exon4;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 5415 5455 . - 1 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 5114 5235 . - . ID=g7824.t1.exon5;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 5114 5235 . - 2 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 4715 4935 . - . ID=g7824.t1.exon6;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 4715 4935 . - 0 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 4322 4451 . - . ID=g7824.t1.exon7;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 4322 4451 . - 1 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 3945 4040 . - . ID=g7824.t1.exon8;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 3945 4040 . - 0 ID=cds.g7824.t1;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS exon 3392 3661 . - . ID=g7824.t1.exon9;Parent=g7824.t1 NODE_538_length_21581_cov_41.7083 AUGUSTUS CDS 3392 3661 . - 0 ID=cds.g7824.t1;Parent=g7824.t1 #PROT g7824.t1 g7824 MAVTGAHSLASGPSLRKQSGLRRVSGVVLLLSLAISLSFFTLCAADHKAEFVAWFKENGGYAHKNVAIQNVDKIVGDGVFATGKIKANATVFSVPANLIVVPGAAKTNASRYMDFLMNDDAYLMLFCILERRNASSWWAPYMRVLPAEEKAMQFPTFFEGSEIDALQASIVKKWITLRQEEMATYYKHFMQDIVGLKKDPIVVDALSEKSFGWAFGMMHSRAVTITVEGARRSALVPYVDLLNTDVPGKVNINCKFVDDKFVCRTTAAVEKGAQLLVGYGPYLDRPNSRLLLDYGFLLPLTVHDIAVIGPPRRFAEDEEPDDDAAEVLREEWLEKDKDEHKMWGAGDWDEFNVGYKSGVDLDLIRYARVLCATADSLSPANSKATAAKLDKDEPLSDAEETCMTKLLLRHLQNVIASYSTTLEADFKELRQLVADKSSLDAESTRRLMILQLLIGEKVALHDSIYGQGAALEMLAAIDAKKGTSGSEKTNSANKDESFEEETDKENSGKDEL* # PASA_UPDATE: g7830.t1, single gene model update, valid-1, status:[pasa:asmbl_8035,status:12],[pasa:asmbl_8036,status:12], valid-1 NODE_538_length_21581_cov_41.7083 . gene 18323 21060 . - . ID=g7830;Name=g7830.t1 NODE_538_length_21581_cov_41.7083 . mRNA 18323 21060 . - . ID=g7830.t1;Parent=g7830;Name=g7830.t1 NODE_538_length_21581_cov_41.7083 . exon 20608 21060 . - . ID=g7830.t1.exon1;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . CDS 20608 21060 . - 0 ID=cds.g7830.t1;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . exon 20233 20365 . - . ID=g7830.t1.exon2;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . CDS 20233 20365 . - 0 ID=cds.g7830.t1;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . exon 19041 20021 . - . ID=g7830.t1.exon3;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . CDS 19041 20021 . - 2 ID=cds.g7830.t1;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . exon 18323 18688 . - . ID=g7830.t1.exon4;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . CDS 18582 18688 . - 2 ID=cds.g7830.t1;Parent=g7830.t1 NODE_538_length_21581_cov_41.7083 . three_prime_UTR 18323 18581 . - . ID=g7830.t1.utr3p1;Parent=g7830.t1 #PROT g7830.t1 g7830 MSSSYMCTICAQKVPTAEAIKHFTPCIQGWIEKALAGVTRDADLDDASSMDSASAGQLAAVKRTLSDTTKRLEAIAAQSDENGKRLDLITGGAARDSMTAKRVTDLSTKIEHALSGKVGFGDLEKELDRQKSTMMAELKDFILATQAESVKAIRKGLDQGTMRVPLGISVVQEPPVHRDGQSTAVFRLEAKFGSAENDKGDSTHQKADKAQAPAKPSPKKKAATATATATAPAPAPAPAPAPAPATAQDKAKVLPAVPSAPVTPAAAKPAAKPAAKPAAKPVTAAVAASTPKPKTPAPAAKPAQPQSPMSRAQPQQKPIEVHSSSSETSSSSGDEADESVANKAKKAPEKTTQKKPASSESSSESSSSDSDSDDDDSSSQNKSKSKSADGASGRGRGRGRPRGVLATRGRASAAIGRGRGRGASTASSAPLSKDTANAPSNATKAAFPSNAATTAPVPATPNKAMAMGMSTMNIAPMPLMPSPPPPIVKSTSSGAVVSGVSARGRPRGRPRRVPGAMPRPVGDAAANRKRKASEGDSDDGKVSKKQAVSSGSDMDSD* # PASA_UPDATE: g10397.t1, single gene model update, valid-1, status:[pasa:asmbl_5209,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 54543 56956 . - . ID=g10397;Name=g10397.t1 NODE_28_length_60289_cov_41.835 . mRNA 54543 56956 . - . ID=g10397.t1;Parent=g10397;Name=g10397.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 56934 56956 . - . ID=g10397.t1.utr5p1;Parent=g10397.t1 NODE_28_length_60289_cov_41.835 . exon 55458 56956 . - . ID=g10397.t1.exon1;Parent=g10397.t1 NODE_28_length_60289_cov_41.835 . CDS 55458 56933 . - 0 ID=cds.g10397.t1;Parent=g10397.t1 NODE_28_length_60289_cov_41.835 . exon 54543 55303 . - . ID=g10397.t1.exon2;Parent=g10397.t1 NODE_28_length_60289_cov_41.835 . CDS 54578 55303 . - 0 ID=cds.g10397.t1;Parent=g10397.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 54543 54577 . - . ID=g10397.t1.utr3p1;Parent=g10397.t1 #PROT g10397.t1 g10397 MFARTLFVMASLGACVRGGVRASVQSLARLIARSPTQGHSWTPARLAHNCHPTTSIFPLFAQSQLPSLIGIKSLRNGVTFRTLATANPSTNTPHDTIESVRAANEAPVLVATSSAKSIAVADSVSGDVKPTDGAVVDAPETAAAEDDAISALVAEGLEALPRHCRGCGAQLQTDNPTQRGFIRAKALSPAPRDPSVRPPWDRHSVATDLPLSDADIALAAAQGQPIELIPSWGDVQAQMKSARERPIICQRCHDLRFRNKGSSTELTEDEFEKYIAVIRRRKCLIVNVVDLCDFPLSSFSALDRVVGSEGRVLFVGTKADLFVPRIDRHLDVVREWFKSAVLASGSIPNSLKERIAGFEVVSSRTQDGLKRVATAIERHRNGPELYAIGYANAGKSSLLNGLLSELGYRRGVAKKAPPLTVSPIPGTTLASIPIPLPRHRDRPDVRPFILHDTPGILRQSSILSGLTSEEITDVVPRDRKFDRRSFRLTDGKTLFIGGLARIDVAGLGEHGEAFLCVAAASTVSTHVCKTENADWVFDKHAGSGILTPPHRTPASENPPPSLDAASTFEVVGKGTHAEAVEVVISGLGTVSFRAKFGAKATLFVRLPTGVAVVLREPIPITEKGAVKKESGGTIGGNGSRKNKGADEPNVPSVPAARTPGSMQRSVRPHRPLPDTGDVRRSFIKRDSDGGREFGSGGHHKLAGAGTGTDSLFRRGERGRTRSAAGRAGRDPTR* # PASA_UPDATE: g10390.t1, single gene model update, valid-1, status:[pasa:asmbl_5205,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 21977 26870 . - . ID=g10390;Name=g10390.t1 NODE_28_length_60289_cov_41.835 . mRNA 21977 26870 . - . ID=g10390.t1;Parent=g10390;Name=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 26796 26870 . - . ID=g10390.t1.exon1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 26796 26870 . - 0 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 26575 26678 . - . ID=g10390.t1.exon2;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 26575 26678 . - 0 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 26335 26450 . - . ID=g10390.t1.exon3;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 26335 26450 . - 1 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 25981 26115 . - . ID=g10390.t1.exon4;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 25981 26115 . - 2 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 25522 25738 . - . ID=g10390.t1.exon5;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 25522 25738 . - 2 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 24733 25286 . - . ID=g10390.t1.exon6;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 24733 25286 . - 1 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 22726 24581 . - . ID=g10390.t1.exon7;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 22726 24581 . - 2 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . exon 21977 22555 . - . ID=g10390.t1.exon8;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . CDS 22265 22555 . - 0 ID=cds.g10390.t1;Parent=g10390.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 21977 22264 . - . ID=g10390.t1.utr3p1;Parent=g10390.t1 #PROT g10390.t1 g10390 MMEAEAGRLVSQEMPPIADIIEGCPDLSHNLSRSFLMEGDFLELTSKLSVKTYIKLYLFSDSIVVARKKMWRMRQSSAYKFDCMSDLTKLIAGAVSIQGAPALQLSFTEADEPLRVFSPAKNTDVRKWVAAINISTGHQQLSDELRTHPHAHPSGSASSHHHRNRRASVFVTMEDFLGEGDRIDTQEQQLRYFERQVAIQVADILKAPSNDALKERAFELRTLVDSFLSAASGWFAKSRPPSVDQPVSGNSLTAPMAMPHHAQASLVPQSPSDILFSASPSSGSMPLHAPTSFGTASDRSVEGRFARRCKALSDAVDALLEAVAPEAVAPDERKVRSLSISSNSVPLSPGFGPSGLNSPRGEDGGSGRGATLSEGKEGKCKEASKALVVATQLVGDYLQEALRIKRVDLKEEELAESPSSASSQHASPERGRARSSPAPAHFAPAPSMMGRRRSLSTSNIADLHAAQKLFQPKKLQDASLTSLTDDTLASIAGSEESLVSAHLPTVMPEDRLAIQSLPQSASLAAAAAKAARDRQATRALAPADRSDSDLDLEKALELGPDMLVSEDDTASNDDTPATPKRLERSVSHDGPHPTIGGASSQTSAAHPAAAALAVNSKHRRTASSFATLKGGLNWMKRETSKKQQPLTRTASLTNLQLIHRKMNRKSSDGSSALESRRSLRRQGESIDLDDDGFDAASEAGDPHADEDGVEADLLSIEAEDIARQLALMDTALLREITALECLDCAWTKKNKAERAPNIIACIEWFNRIALFLTTEILTCETMGVRAQVMAHCIQIARHCRKFNNFNALKAILTGLQCTPIFRLKKTWALIPAKARRHFEELSELMSEDSNHRNYREELRKAHEQGSPCVPYLGIFLTDFLFTESAFAEATAADKRQSKMMGILEQLQDLQRTAVYPFNASMRIQAFLRSARHNTEQENYRVSLEREPKETQAAVDEGGDDAFFEALGTATHEQLLAELKKLEERLDRLYAEIAKSSNKDDEEADRMWDMQRKVTQLRNLLKIKKRGTVLSDGCEPGGRLALMRQASVDDAGDSAAPTHAHADMHTHAHAHTTVHTAAHASTHSILSSSQNHSADSDHLAASATECEYDPALATTV* # PASA_UPDATE: g10393.t1, single gene model update, valid-1, status:[pasa:asmbl_5206,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 47368 48034 . - . ID=g10393;Name=g10393.t1 NODE_28_length_60289_cov_41.835 . mRNA 47368 48034 . - . ID=g10393.t1;Parent=g10393;Name=g10393.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 47991 48034 . - . ID=g10393.t1.utr5p1;Parent=g10393.t1 NODE_28_length_60289_cov_41.835 . exon 47914 48034 . - . ID=g10393.t1.exon1;Parent=g10393.t1 NODE_28_length_60289_cov_41.835 . CDS 47914 47990 . - 0 ID=cds.g10393.t1;Parent=g10393.t1 NODE_28_length_60289_cov_41.835 . exon 47368 47806 . - . ID=g10393.t1.exon2;Parent=g10393.t1 NODE_28_length_60289_cov_41.835 . CDS 47443 47806 . - 1 ID=cds.g10393.t1;Parent=g10393.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 47368 47442 . - . ID=g10393.t1.utr3p1;Parent=g10393.t1 #PROT g10393.t1 g10393 MRPQGTDGSDYAFRQVVVAQYKESATLKARLQVLAILTIGIAPLIVIVLRTSIKIEALVAWASLLVSLAVGTLRALPKNNSALLKVCLGGFALASLGAVGALYPVVSSSSSTAGALLGAYAVLQVAIFYHGVALRRAWSPAGRKKQ* # PASA_UPDATE: g10395.t1, single gene model update, valid-1, status:[pasa:asmbl_5207,status:12],[pasa:asmbl_5208,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 49947 52663 . - . ID=g10395;Name=g10395.t1 NODE_28_length_60289_cov_41.835 . mRNA 49947 52663 . - . ID=g10395.t1;Parent=g10395;Name=g10395.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 52596 52663 . - . ID=g10395.t1.utr5p1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 52256 52663 . - . ID=g10395.t1.exon1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 52256 52595 . - 0 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 52087 52131 . - . ID=g10395.t1.exon2;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 52087 52131 . - 2 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 51758 51912 . - . ID=g10395.t1.exon3;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 51758 51912 . - 2 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 51520 51600 . - . ID=g10395.t1.exon4;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 51520 51600 . - 0 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 51268 51374 . - . ID=g10395.t1.exon5;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 51268 51374 . - 0 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 50724 51087 . - . ID=g10395.t1.exon6;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 50724 51087 . - 1 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 50543 50620 . - . ID=g10395.t1.exon7;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 50543 50620 . - 0 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . exon 49947 50403 . - . ID=g10395.t1.exon8;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . CDS 50182 50403 . - 0 ID=cds.g10395.t1;Parent=g10395.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 49947 50181 . - . ID=g10395.t1.utr3p1;Parent=g10395.t1 #PROT g10395.t1 g10395 MGRKRQAEGAHQREAVVATVDAVRVTRSMLRTVAGSVAGGGSGATVAAVAAPKAVAAVRAASRATPTTAASPRRRKQAAESALPRDILKAGDEVDTMDSDSHKITSPAKRKIGVFRTSDGELRLIPKQGGASSKRVGAHMSAAGCVGNAPRNARSIGASAFAFFTRSQRRWDSPQYSQEEIDDFKGVCRSLEYTPSCILPHGSYLINAGSPDPESRAKSRAALLDEVRRCEQLGLALYNFHPGSTVGHGTVDECLTRIAESIDMVHGLTKGVTLVIENMAGQGSSLCCPPRLPPPPHWHALTIIGAVDARLPQEIRGIIDRVSDKSRVGVCIDTCHAFAGGYDLSSPAACERTFAEFERTVGFKYLKGLHLNDSKGAVDCRKDRHENIGKGKIGNACFEFVMNDSRFNDIPMVLETPAGGAASADGDGPGTPRPSKGTKDAEQAFLDVYKREIALLYSMEKRP* # PASA_UPDATE: g10399.t1, single gene model update, valid-1, status:[pasa:asmbl_5210,status:3], valid-1 NODE_28_length_60289_cov_41.835 . gene 59179 59929 . - . ID=g10399;Name=g10399.t1 NODE_28_length_60289_cov_41.835 . mRNA 59179 59929 . - . ID=g10399.t1;Parent=g10399;Name=g10399.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 59861 59929 . - . ID=g10399.t1.utr5p1;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . exon 59741 59929 . - . ID=g10399.t1.exon1;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . CDS 59741 59860 . - 0 ID=cds.g10399.t1;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . exon 59481 59549 . - . ID=g10399.t1.exon2;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . CDS 59481 59549 . - 0 ID=cds.g10399.t1;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . exon 59179 59354 . - . ID=g10399.t1.exon3;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . CDS 59235 59354 . - 0 ID=cds.g10399.t1;Parent=g10399.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 59179 59234 . - . ID=g10399.t1.utr3p1;Parent=g10399.t1 #PROT g10399.t1 g10399 MEFGAGPSASGASSPAGKREQIMEQVRMQMAVANAQELLQRMTEKCFTKCIYKPGTQLDGGEKTCLAKCMDRYTDAWNLVSRAYAGRLQRDRNSHMQHMNNE* # ORIGINAL: g10391.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 AUGUSTUS gene 27627 30923 . + . ID=g10391;Name=g10391.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS mRNA 27627 30923 . + . ID=g10391.t1;Parent=g10391;Name=g10391.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 27627 30923 . + . ID=g10391.t1.exon1;Parent=g10391.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 27627 30923 . + 0 ID=cds.g10391.t1;Parent=g10391.t1 #PROT g10391.t1 g10391 MATGARAQRPASLAQGPRHYEWASDKSRLEINLPCSKHSHNHSHSHRHARRGEKTDHLFCSRYFPTATTTTTTSTTATATAPADSAGASSEQPCTCPRSAPKGNVNGSNLEASQLSDRVRRIENDIDSVRLSADIASHETRLNGLSCEIEQCKRESERLRAGAAGDDRASRDLVARIDALTESQKSLVASIHKMRRDKQREIDREKENVRIGATRISNLRQDVTSKDCELDRMKVRVRTLRLDNETNKATADGYRGAYTALQDKLADTNKQLNDTIREREVLEGLCRKRDAMIASYKARFVAEGIDPETAFNGAANARTRRQQLETDVARMKQALADAQLRADAREIECREMKDELQKSSEALRLAARAKADNDSSIRDELRRLSVSLEQAHELRAAATAENEAVRKAASEVQLARDVSVRANRELQEQVRDTKHALDLAIRRAHDAECAAAAERSKLDECVRMRVVLEDSVREERASRESAQSTAARLSTEVALAVSQRDEASRSLRELQEILASTRNDLNGTRGSETALREQISRLQRDKEELELQMERRAVDVADARRAAETERQAREASQLSIRESLAILEAERKVRVEVEESRRGLESRIAELHVKLERSDATAVARADEAARRHDELLRALETERSRNAELTGRLEGHVQLAARQREEAAEQVRDLEAQLAASKGRVAELEVHRGQVIRLQERERSLQTELDEAKAAGGKAKARALELEGSQSAAAAAQQQCIELEEERGRLRSECARAASRIADLERCEKQLAEALARERDTLQDMHHLKLQNRVANSRGDEVDVVRRKLAQCEEREKKLKQEHAQAVAARDDALHSSASLERELVVLRQRDSAAASRLLNAAADGDELRTMLDEGRAERSDLLERCRRYEEEVEASRTKLERALNRNGELATELETVRRSERAHAAAAEEHRQVAADVARGMSRGADDATAKHARLVMSRVAALLDSVAAVAERLRSSSDVSFSLVDECCGAITAVCASGQEEISSHGTAEDIQRCDWCPDFEFLAPAIDAFERSRDQTREYLDDVHGLIGGDPAEFIRAKAKVVELNDQIGSLLVLLCRVVEIASSQMSILSAVHGGRA* # PASA_UPDATE: g10389.t1, single gene model update, valid-1, status:[pasa:asmbl_5213,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 20360 21966 . + . ID=g10389;Name=g10389.t1 NODE_28_length_60289_cov_41.835 . mRNA 20360 21966 . + . ID=g10389.t1;Parent=g10389;Name=g10389.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 20360 20545 . + . ID=g10389.t1.utr5p1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . exon 20360 20668 . + . ID=g10389.t1.exon1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . CDS 20546 20668 . + 0 ID=cds.g10389.t1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . exon 20868 21093 . + . ID=g10389.t1.exon2;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . CDS 20868 21093 . + 0 ID=cds.g10389.t1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . exon 21341 21470 . + . ID=g10389.t1.exon3;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . CDS 21341 21470 . + 2 ID=cds.g10389.t1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . exon 21699 21966 . + . ID=g10389.t1.exon4;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . CDS 21699 21777 . + 1 ID=cds.g10389.t1;Parent=g10389.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 21778 21966 . + . ID=g10389.t1.utr3p1;Parent=g10389.t1 #PROT g10389.t1 g10389 MGVFDKFLDFFGFRRRKVNILCVGLDNSGKSTIINKLKPDKSQINDVVPTVGFNVEVIAYQNLNFTVFDMSGQGRYRTLWEHYYSDCEAIIFVVDSTDKFRSVVVKDELSEMLSSKDIRKRRIPILIYANKMDLPGSLSHVEWSNLLELDKIKDKPWHITASNAITGQGLTEGASWLADKLRNEK* # ORIGINAL: g10394.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 AUGUSTUS gene 48396 50146 . + . ID=g10394;Name=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS mRNA 48396 50146 . + . ID=g10394.t1;Parent=g10394;Name=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 48396 48402 . + . ID=g10394.t1.exon1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 48396 48402 . + 0 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 48529 48594 . + . ID=g10394.t1.exon2;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 48529 48594 . + 2 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 48736 48804 . + . ID=g10394.t1.exon3;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 48736 48804 . + 2 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 48876 49000 . + . ID=g10394.t1.exon4;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 48876 49000 . + 2 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 49169 49306 . + . ID=g10394.t1.exon5;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 49169 49306 . + 0 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 49569 49707 . + . ID=g10394.t1.exon6;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 49569 49707 . + 0 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 49862 49924 . + . ID=g10394.t1.exon7;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 49862 49924 . + 2 ID=cds.g10394.t1;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 50040 50146 . + . ID=g10394.t1.exon8;Parent=g10394.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 50040 50146 . + 2 ID=cds.g10394.t1;Parent=g10394.t1 #PROT g10394.t1 g10394 MTNYHEEQAMELEALQAIYADDFEELASDPKSFRISIASEGVDEDEQISLVLQLTYSPTYPDELPIMDIETDDLEPSQIEALREMLVDQGNQSLGTVMVYTLVSAAKEWTDNIGITARQERESAARAIIEQEKQAEQRKFHGTPVTIDTFKAWKAAFDKEMADVAAKAGVKIDTKKAKLFTGRQLFEKDETLKDSDIAAYDEGDVVVDETLFENMGDLDLDADEDGTNIQFGDSDED* # PASA_UPDATE: g10387.t1, single gene model update, valid-1, status:[pasa:asmbl_5212,status:3], valid-1 NODE_28_length_60289_cov_41.835 . gene 4732 8550 . + . ID=g10387;Name=g10387.t1 NODE_28_length_60289_cov_41.835 . mRNA 4732 8550 . + . ID=g10387.t1;Parent=g10387;Name=g10387.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 4732 4916 . + . ID=g10387.t1.utr5p1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 4732 5012 . + . ID=g10387.t1.exon1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 4917 5012 . + 0 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 5158 5339 . + . ID=g10387.t1.exon2;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 5158 5339 . + 0 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 5535 5826 . + . ID=g10387.t1.exon3;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 5535 5826 . + 1 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 6060 6324 . + . ID=g10387.t1.exon4;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 6060 6324 . + 0 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 6519 6611 . + . ID=g10387.t1.exon5;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 6519 6611 . + 2 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 6733 7182 . + . ID=g10387.t1.exon6;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 6733 7182 . + 2 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 7373 7558 . + . ID=g10387.t1.exon7;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 7373 7558 . + 2 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 7790 8092 . + . ID=g10387.t1.exon8;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 7790 8092 . + 2 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . exon 8309 8550 . + . ID=g10387.t1.exon9;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . CDS 8309 8382 . + 2 ID=cds.g10387.t1;Parent=g10387.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 8383 8550 . + . ID=g10387.t1.utr3p1;Parent=g10387.t1 #PROT g10387.t1 g10387 MGKEEDLLDAAGKGDFDKVEKLLNKDSKKKKKDEDAAEPTKEKVVVTHLKINCREMVTAGHTPLMLASLNGFTEIVEILLWHSAETNLKDSKKNTALHLAAWSGKTEIVDLLLNFGAKINEKCATGDTALHYAAQFGHRFVIHRLLKAGADPMEANAAGETPLDVAARFDKRDCVSLLLDNDARVVACTRSLREAAKTGRNEIVAILLDAGMDPNDIDASTGSTALHEAARYFRKDAARLLLEYGADMLLKNSAGESALGIVEQYHKLKENDIYPLFKERYGKAATKHKRISVMPLAPVVVDPTTKVAPKSVVAPMKSRGRWTQNNDQFRNIAIAGHAPSNLLIDDPKKFWQIPSAQRNWIVFDFGTPHVITGIRLCGWSNAAMVREFQFDHAESLSGPWDTALVATAEKVGPESLSEPGVAQDFVGSFAATARYWRLFVRTNHGSFNTALHKVQFFGADKGLIEWLEGLGAAQYLESFVQHGFSELSDVPFLLDSDIASCVSLPGHRKKVSIAVKEQKDKSVVLQSISFSVPPVFETREHSVLPPFTVIGSAGCEDELELVAHGDPAIEGTLIRRLVNKGSRPSEATFDDIKLSPAGNYLLEVRAVHNVDIFVQQQAPIVVGFELKQNTQLDAMFGDLDSMLKFD* # PASA_UPDATE: g10386.t1, single gene model update, valid-1, status:[pasa:asmbl_5202,status:12],[pasa:asmbl_5211,status:12], valid-1 NODE_28_length_60289_cov_41.835 . gene 1 1867 . - . ID=g10386;Name=g10386.t1 NODE_28_length_60289_cov_41.835 . mRNA 1 1867 . - . ID=g10386.t1;Parent=g10386;Name=g10386.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 1586 1867 . - . ID=g10386.t1.utr5p1;Parent=g10386.t1 NODE_28_length_60289_cov_41.835 . exon 1582 1867 . - . ID=g10386.t1.exon1;Parent=g10386.t1 NODE_28_length_60289_cov_41.835 . CDS 1582 1585 . - 0 ID=cds.g10386.t1;Parent=g10386.t1 NODE_28_length_60289_cov_41.835 . exon 1 1475 . - . ID=g10386.t1.exon2;Parent=g10386.t1 NODE_28_length_60289_cov_41.835 . CDS 1 1475 . - 2 ID=cds.g10386.t1;Parent=g10386.t1;3_prime_partial=true #PROT g10386.t1 g10386 MATEQAPQFDILLAAAQMNPSSERDVVIRELSPTLSKKRTRTTSIQTENSNGDAAVRCDNSTALEGKSAVSVSDPACQTAPVVAAAGVQPAKKGEVLSPRTVLDAQNVFGGENGSQQPQSQTQPITEEGQTQRDEKPAIASADVKAEVPTVAVPADSEMGASSDDESEEANEDGKSEDGEATTAAASGKVRSGKQWSCAFAGCGKVYGKLSHLKAHQRSHTGEKPYLCAWAGCCARFTRSCELARHKRKHLGIKNFVCAVCGSRFARPDHLSQHTLRRHDMPPWVNKVMNVLQTANRTGPGATAMPTAEGFREAFRNDGVEAAKEMLGKTLLKLQGPGVKGIDIGGMNGPIGQHTAVGLVAQAMQQQQMHTLQQQQQQHMPVHVHVGQLQGQNVHPHSIAQQQHYMQQAAVGAGLSVNVNANPMGHMHSLSMSAPTTPREAQLLHLQQMHHQQMLVVGAGSQQQQQQQQQQQQQQQQQQQQQQQLAQSSMAMW # ORIGINAL: g10396.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 AUGUSTUS gene 53496 54138 . - . ID=g10396;Name=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS mRNA 53496 54138 . - . ID=g10396.t1;Parent=g10396;Name=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 54022 54138 . - . ID=g10396.t1.exon1;Parent=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 54022 54138 . - 0 ID=cds.g10396.t1;Parent=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 53739 53822 . - . ID=g10396.t1.exon2;Parent=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 53739 53822 . - 0 ID=cds.g10396.t1;Parent=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 53496 53627 . - . ID=g10396.t1.exon3;Parent=g10396.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 53496 53627 . - 0 ID=cds.g10396.t1;Parent=g10396.t1 #PROT g10396.t1 g10396 MNTLNSLLNDALTSTDHVQQCAIIRRKDGSLRSCSAGFPDIRENGIEFADKKYKVVRADNAAVYAKEGKNGLIIVRTPTLVVVGLYDANMYPGVCAEAIEKLGGASTDGT* # ORIGINAL: g10392.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 AUGUSTUS gene 31317 46903 . - . ID=g10392;Name=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS mRNA 31317 46903 . - . ID=g10392.t1;Parent=g10392;Name=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 46210 46903 . - . ID=g10392.t1.exon1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 46210 46903 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 45682 46022 . - . ID=g10392.t1.exon2;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 45682 46022 . - 2 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 45235 45558 . - . ID=g10392.t1.exon3;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 45235 45558 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 44445 45089 . - . ID=g10392.t1.exon4;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 44445 45089 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 33309 44339 . - . ID=g10392.t1.exon5;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 33309 44339 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 32924 33125 . - . ID=g10392.t1.exon6;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 32924 33125 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 32371 32765 . - . ID=g10392.t1.exon7;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 32371 32765 . - 2 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 31878 32216 . - . ID=g10392.t1.exon8;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 31878 32216 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 31317 31712 . - . ID=g10392.t1.exon9;Parent=g10392.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 31317 31712 . - 0 ID=cds.g10392.t1;Parent=g10392.t1 #PROT g10392.t1 g10392 MEQLDERHWWIISRLQEAFGLGGFDNPTVVEDFLCDDIVLSDVNDFLSAEGPERLFVHYQPPRPAKVHDDEGTAANGDGHGHDAHPHTRPSIAPPPVTLFLSHGDDAALHGKCVFFVRVNAQRPVDVFRFENEVLCGEISEPVLASLDRILGEVFVPLLSAKSDWGKASDDTAAQCIGSLMKLSASVQNAATQHDRHDIVLAKPEARYDVENKQATFNRVANNPEFVAHFEVLLEGWMGTIERVLEGNGTTTASGVSSGASPAAANGRPVAGDSHSGDAHAHDDPAAAELETWRERQGSLNAIVDQLRTAECKAVLGVLVAAKSRLLKRWKVVDASITDAANEAKDNVKYLETLRRTTSPITNGTPASIMDALPMILNGIRTVHAVAKANATKEKVTSVFVNVTAQIVAACRAYLAGEGAGNIWHVHPDEATARADACAALNKAYQEQFGAIKEKFVGGPKNRPLDLPETVVFARFERFVHNARQLVDIVVTRAQYVDLLGLLSPSEPLVERVAEFLDDIAHLREGTLAAFEEGGCGQITDVAIDAAHIEFTRRVTDIEISLRKYVNASFENKRTTEQALSLLAMFRPVTGRPGVRNELDSKYLDVFLMYEGELESVQGMYERDKQQPHLIRNSPLVAGNIAWARNLLRRIEEPMKTFREQKAVMASKEARRVFRIYNKVAGALIEFETLWHQQWCHHVDTVKAGLQATLLVQGEDGSLFVNFDSAVLELMHEARWMVRLGLRVPEAALAVVGQETRFKRYHDQLAHVIGRRERIVGRVNPVLRPLLAPHFEDLAARFKPGLVSITWSSMNIDAYLHRIHQGLARLDSLVGALNEAMESRVDRDLAAIGTCVLLDVGRDRTYTAEEFVSAQEAAVRTNAELLSARTTGILAGLQDVIRMARATVPSTAPGAGEHVPAAGKQTTQSREHPQHHHGAHSDDARKATTEQSADALLAHYARLLYHATVSAITNSLDLLRRRLGLIPPQPKTRGGKPVPLFFVDVELAIPDFTITPTLEDIQDVVGRVVHMVLGCSHSVRSWAGVHGAALVAVPSISDSSSGANSLVRQSLYGLVCETPCAVKAVLHLTGTAEGLRAGVLDQLASFRRFDALWKRDIHATYDAFLRSKPRLDDFESEIRHFLSVERDIEQIHPAMIVGPLLLVTQSLKYSLKAEAGAWKTQFAKSLHEDARRELEIVSSYMALTGQRLSKQIGTLDDLRDITQLLREVKEKDAEMGAMLCPVEERYDLLLNYEVHVPKEEADAVAALRRDWKGIRVAADGITDRLGALRVQFQRDLDRQVKAFVVDVIQFRNDFDANGPMVPGLKPADALARLSRFTRMFDERNANRMALEAGERLFGLQVTAYPELEKTEAELAMLQSLYSLYTDVTEFDRRFRGLLWSSTDFDSLATELQSYVEAAASLPERLREWEAYRELRRCLDAYAAVLPVVSSLGAAAIKNRHWLQVMGVTGKSFKVEAEYFRLGHLLDLGLLRYREEIATITHSASMELELETRMRHIEEEWSEQSLVFSRFRPTGDGPVILSPAETQRTIGLLEDSQIALASMLNSRYIAPLREEVSLWVAKLSTIGEVVEQWLVVQNMWTYLESVFSDPRIASQLPKEAKRFAMIDRSWNAIMQRAFEAPNIIHCCHGNEGLKHLLQHLTDQLELCQKSLAGYLEAKRQAFPRFYFVSDPILLGMLSNAGRPSSIVPFLKSIFDNVAGIEFDRPGPDATHITAIISEEGERYALASGVGLRGGVEEWLAVLRDELRSSLVGSLRGAMAKYRDDHADVDELAQRLPAQIAGLLAQVTWTEHAEDALREQKADRRTIIAANRRITTTLSRLTEAVRREGLTRAEIARLQLLIVIAMHQRDTFDDVVRKKVKDPTEFDWQRHVRVYFHGHAGSGASQLAASAMSAASSGPVSVSAANGSTAGDTRSSTSGGGQSKREEVEFSLLDTSFGYGFEYLGGRARLVATQLTERAFIALTQALASIRGAVPFGPSGVGKTETVKDLGRMLGRYVVVLNCSDQMDSGILGSLLKGLAQSGAFGCFDELARVQFQVLSVFAQQLHVVLSAIRAGRKTCVFTDGQHLRVGPQFGMFATMGMVAGSLSQSSLMPSNMKALFRQVAFVAPDTEVIVRVRLASMGLSEVRTIARKTVMLFRLCEEQLSRQPHYDFGLRTVLSILEFAGHEKTRRAQFIADGGAPPQSASQQPLTKQPSTANHPAIHSARSVVNLFVPAGTTNNNLSSVQAIATSQFDGATRKDVALLTQIIHDTTAPRLLEHDLPVFRALLRDMFLDVAPLSDDGSWHDSVERAIRKRASDAGLIQHTPWVSKVMELHSLALARKGIVVVGPAGAGKSKAVETLTAALSAMGSGMVHKVQRFNTCALTNEQLFGHFDGGAGRDWIDGVFSALLRKAVKAKNTTSWFCFDGPIAAPWTETLANALDESGTLTLVNGDRLPMATGIRLVFETTDLRFASPGAISRCGVVYVGESVLGWKPMVESWLQTRPPEEALLLRPLFERYVDKTLRFVNAESQTTRMRVCSVGLLSTCTALLAALLGTFVVTVATAALAPPATPMPTGHVGLSTPLPSNSPMPPATPAPRESREVDHRHERVFTFALVWSVGGLLPDGERAGFTELLRSLCPSLPTMDPGFTIFDYYLDETGEWDLWQSMVPIMRPGDAAVPAFTEPFVETAETVRVKYLLGLAADERRNVLLVGAPGSGKTSIIADFLSSRETDSQIVKRLVYSGATNASGVQQFVETCVQRRQGRTFGAENGKRLCAFVDDINLPATSIAGEQPANEVLRQLVEDGGFYSLEKPGDFKVLIDVGIYAAMRPPAAGLEDIPDRLKRHFAVFSLGAPHEDSVDTIFSGIVSAYLSRECAPYDLVSRCAVASRGLLQALAAALPRTAERWHYDFNMRDLVRVCQGLSQCPSEALFLPLWKYNCDRVFSDRLVDPADLTSYDKAFASVFEKHFVGTSAASFPAYFVNFSTADGEPIYATPSQAQLSAVSQTRMDVPVTAAAAAAQATSAAAAVVQSAQSAHGNSRPWIAMADASKLTACVEGFLRRYNEEHRFSSSHLVLFEDTIRHIIAIHRILSLPRGNALLIGPGGSGRRSLCNLASYIAGHRNATVRASRGHGLDQFLADVRNIYRSAVASATPQTLVLTENEVRDDETLDCVNRMLISGEITGLFKRDELETILADLVPAIKRDCPSRLINPYRYFIDRVINNLHVVLCLSADLGALKQKARNYPGLTSACQMVYFADWPKEALSVIAERVVVSVDSVAASINGALAAMHTAAAQACPEYFKKTGRRVDFTPRTYLVFLDKFRALYEDKSLETSSLLDALKVGLERIDQTSQSLTVMSDAIDNNNVRLGRARRLTEQLLADITNSAVRLEKAKARIFSLQGGYGAGAGNDAHSIAPAVAGLDENPLGEAVAVAKGPVEAAVGALELVAALPAEEFAGSNVVAGALLLPLAALAVVLARASADAAPEVVAAAVRANDALSPARIAPVQRDAFHVDATVALRGSTSLGDAAGSVAVLVDALLSTLDVVRAVHASDASHPAVSVTAAGAEADGLNSEVAQLRMELERLQAAFDAALDERQISDSLERSSRERLRAASALLASLGDLRTGWQARVATLTASTATLAADSAVVAAYLSYAGPFNSDFRRTLWTQWLGIMAAAGATVSKNLTPVGFLCNRPTLLSWEVLGLPRDGQPVENAAIVTRHCVAWPLLIDPQSEGVAWLRQNEECRGLLVLKHTDAHFRSVLEECVTKGRPLLVTDIDAEALWADGALRPVLQRQTVANGRACTVMVGDKEIEYNPEFRLYLATKSSNPNIPPDLASHTTIVDFITTMAGLEEHLLNRVVVIEKPTLDKQRRQLLRDAYALETCADDLETRILASLCASHALGFAEDELLVSDLAGFVSSLSEARVELARVQEQLEATSAAWQEYKGIAVRGGALYTVVSWMGQANNMYETSLEQFLRLFDSAVATADRSPLTSKRIENVIATLTYTIHVYMSRGLFERDKVLFLMLLAVQVGLSRDEFTPAEFNFVVRAGSGLDARNVPRKVVEWLSDEQWQNLAALGRFPLFADVIGRLQRLEPQWRPLLDHDKPETATLPDGLDGRMSRMQRLMLVRAFRPDRLVPAGLMFVRDTLGRKYVEALPLNLELAVQQSDSRTPLLLILSPEGTDPLSMVESLARREGIECRSISLGQGQERLALQIVERGMQAGHWVVLQNGHLGLQCIAEVDAMVAKSERVRDNFRLWITTAGDARFPVSVVQGGIKIVTEPSVNLRDGLKRSFLWLTQEHLDSSVRPEWVPFLYSASFLHNAIRVRRKFGAVGWHTAYDWNMGDLAAAVRFAEHQFSANMRSRFPSWPAIRYLISEIIYGGHITDIYDQRLMNVLTDLWIGPQVCNKGFEFYNDYKLPSAALQKDVTPNALHQSVDQLPLVDTPEVYGLHASAEMTFRMQHAAYILDSLATINPTEDSVIKSRSRLTALGEVLNDVLHKLPKEVSKEALQERMKKPGGASPMNLFLAREIDCLQRLLNEIKSTVKRIKSVIKGQTVATPGTLVVMDALLRGLAPKDWTDLSWDGEQTPLSPWLQDITQRGEHIAHMVAVRERTAVLWIGGFFNPQALLTVIKQEAVRSHPGWSHENVELQFDVTSRETVRDAPAEGMYVNGFFLRGAGWDKSGARLTDLPSVVRGPVPLPIIHVTAVHTVDKGPAAPGNVGMDAPPAPVVAATGNAATKSFEPKQLYSCPSYRSAKRSTDSFVCELDLKTDDSPSKWVLRGVCCTLRPY* # ORIGINAL: g10388.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 . gene 8967 20033 . - . ID=g10388;Name=g10388.t1 NODE_28_length_60289_cov_41.835 . mRNA 8967 20033 . - . ID=g10388.t1;Parent=g10388;Name=g10388.t1 NODE_28_length_60289_cov_41.835 . five_prime_UTR 19789 20033 . - . ID=g10388.t1.utr5p1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 19765 20033 . - . ID=g10388.t1.exon1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 19765 19788 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 19231 19467 . - . ID=g10388.t1.exon2;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 19231 19467 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 18978 19074 . - . ID=g10388.t1.exon3;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 18978 19074 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 17998 18844 . - . ID=g10388.t1.exon4;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 17998 18844 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 17171 17756 . - . ID=g10388.t1.exon5;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 17171 17756 . - 2 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 16305 17003 . - . ID=g10388.t1.exon6;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 16305 17003 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 15399 16171 . - . ID=g10388.t1.exon7;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 15399 16171 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 14884 15248 . - . ID=g10388.t1.exon8;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 14884 15248 . - 2 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 14576 14730 . - . ID=g10388.t1.exon9;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 14576 14730 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 14193 14383 . - . ID=g10388.t1.exon10;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 14193 14383 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 13929 14027 . - . ID=g10388.t1.exon11;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 13929 14027 . - 2 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 13576 13793 . - . ID=g10388.t1.exon12;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 13576 13793 . - 2 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 12854 13392 . - . ID=g10388.t1.exon13;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 12968 13392 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 10474 12580 . - . ID=g10388.t1.exon14;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 10474 11788 . - 0 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 10160 10327 . - . ID=g10388.t1.exon15;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 10160 10327 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 9891 10052 . - . ID=g10388.t1.exon16;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 9891 10052 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . exon 8967 9532 . - . ID=g10388.t1.exon17;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . CDS 9153 9532 . - 1 ID=cds.g10388.t1;Parent=g10388.t1 NODE_28_length_60289_cov_41.835 . three_prime_UTR 8967 9152 . - . ID=g10388.t1.utr3p1;Parent=g10388.t1 #PROT g10388.t1 g10388 MDVDPAAEASASEAADVDFIFEDSYNEEDALKRFITNRPPGFIVIGKPGCGKSTLARNLAARTNADLIDVPSALEDAIRMGTPAGIKAKEALYSGHEASAELIMEIIEERIDSEDVAYRGYILDGFLECGPDLATQLDFLRSLHRRPDVIIRIVMDDLDLERRRVGQMIDPRTNAIYVHDQYSPRVAIVQHKKEANPPQGDGQGDGQGGDADGGEEDGGSEATAELIDGDASLDIPSADVVARLVKRREDSIGMVRDSLQLYANHSAAIEGYVAEQDTLRTVHVDGTQPLDENMRLLLDKIALMELPPVVEPIRLHLPIDVGDDLSEDVLSRLVIVDTDEASPWLPSPFGRFCPVEYMRENRALVSGKAGCAVGYLGMLFLMASDENAELFMKNPRIYLLQRPTINCRLWLLGGPVAGKKTLAKGLADTYGAQIITLEDAIVGLMEDESHPDREAIVQAATALKAGGTFPPELNVTALRHAIDGVTAGDASAGFIVVGYPTNSDQAHELFDAGIPLPDGVVVLVDMSTDGATAMRAGNSFIDPTTGHAALFGKDRSKEGAMWPRYGPAHFETWNELYQEGISEVLDAVKVVALPVYEVNLDTPPDVVLRNVIKAVNPFHPRAIAKHSPLSDIEDAVTPYGDTKHYCPVILRDLRLLKRGTEEFSVQYLDKTYHLSTEEAMEAFVLKPDTFLPLATVPKIPPMRLVILGPRGSGKTTHGKRLGEELGIPWVPFHERFPETRAAEENEPPHVANALKDFWNGAAYAESGVVIEGFPKSTEEVSLMGEKNVIPDAVVILRLQSETAIRRLYKRTYEQELINRENRKKKAEAAKAEAERAGEEFDIEQEDADDDETGAALEAKLRELITEHNDNDLALLDEIRASFEELQVPVIEVNASRETRIVWSALRKAVAAYVEHRPSLLETVVPLESDIAESLVRSGHVLPSKYGHWCPVELAEGLAIIPLDKTRAPIAAKYRRHIYYFATNENREKFVVDPRKYTKLPPPPPMTPVRLAIVGPPKSGRTTLAKRFSTDLRLTRLSAGEAIRTVLDKHRDTQLALAMDATLRRGMELPDEMVVAALELAIGTASATGYVLDGFPSTQSQVELLEKKGILPSLIVELVLSDADILVRASADRTSPSRANHLHDSDRVVLERAAAYRSSVGGVRAWYETRHGNWRQLAGEKSKWWLVTETQRLLRGNMHHRQVFYAKQRKGHAASIADMGVSPSEFSANLGAFGHFCPVSLVDRGELVDCIECDFKYAAIYKGLYYKTMGPAELDAFLHRPAYYTSHALPEKLPVRRSALDVKMLFPKQLEIKGYCPVTFYEGGQRYESIVPGSLDFVAEYDGRLYAMATDDELTLFMRTPAKYAHLDLPKKLPPVRSPLSVSGLPILGYMEQTVATAITKALTDLGRLKPKFPFHSAQESALRYIGVHLKAYNPRLTDFTRKRFRKILTHFEDSCALITYLRQSMLDSYMKPDERPIDFDFKMDRFLALRDKRVLARLLVSGTTSAKPQRPSSRAGSSRASSRASSRPSSASSDIQPHAPSEGRPSSAGKRPHRPFSGRRIDIVPAETSVM*MRTTSAVFGATLAPLAFVTLVDGGVALPYALLGGALVLFDNALHTHSRLILLDAPLLAGVALCVWLVVKVRVSRTRPPSFSVRWWACMAATGLAMALAVGTKLNGVFIALFVGYYAARDVVVVVAESVLDIETEDWVPVGRHFGARFLCLVGLPVAAYVALFAMHFAMFNGPGPGDLFMSAGYRNHLLMRSVEWGPSHAAFGSVVHLRVADADADADANTPAYLHMRDVELPSGIRSAAVALLSVRSRANAWSIETPLLSTGPRDSGGRLLRAGDEFSLRHVVTGAYLSCGGVPSERRVVANGTADDSIAVGAIDVRAGDPQPPSRLRCATWKVLAGSGVFDDAASGNTNAMGAHVDAAENAMGGDVNTRAPDDSIRSYYTHFALVCQCDGCGVRVTHRTLPQWAGGLGELMCAPSPSSSGNAAPPSLWRIEGHLNANMPDERISADDPRGDASKPSFIRLFFGINWAILVANGRLKGSHPYASSAYSWPFLGGGVSYWMGPDNSQIYLLGNPLVWWASTVGIFAAIAAQVAVCCTWLGSLGDDETDGGRPPCPSRPVRVNDACAIFVCGYLFCYAPFFIMERQLFLHHYLPALYCAILASVAIADRATSLAAAALAPRWVHAHSVVSWVVALFTCAAAFVSFAKFRPLSEGTPISLEHLRALQWMRAWNFQYI* # ORIGINAL: g10398.t1 original gene structure, not modified by PASA NODE_28_length_60289_cov_41.835 AUGUSTUS gene 57188 59130 . + . ID=g10398;Name=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS mRNA 57188 59130 . + . ID=g10398.t1;Parent=g10398;Name=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 57188 57291 . + . ID=g10398.t1.exon1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 57188 57291 . + 0 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 57492 57623 . + . ID=g10398.t1.exon2;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 57492 57623 . + 1 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 57731 57775 . + . ID=g10398.t1.exon3;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 57731 57775 . + 1 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 57911 58080 . + . ID=g10398.t1.exon4;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 57911 58080 . + 1 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 58361 58446 . + . ID=g10398.t1.exon5;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 58361 58446 . + 2 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 58701 58808 . + . ID=g10398.t1.exon6;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 58701 58808 . + 0 ID=cds.g10398.t1;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS exon 59017 59130 . + . ID=g10398.t1.exon7;Parent=g10398.t1 NODE_28_length_60289_cov_41.835 AUGUSTUS CDS 59017 59130 . + 0 ID=cds.g10398.t1;Parent=g10398.t1 #PROT g10398.t1 g10398 MAKSKYEYVKAFESDNVCLVNTWMVVRVDGRSFHRFSVAHAFEKPNDSRALRLMDECAKAVMSEFTDVCVAYGESDEYSFVFGRKSTLYGRRSSKISTAVVSLFSSCYVLHWPEHFPGVPLAYPPSFDSRIVCYPSVENIRDYLCWRQADCHVNCLYNTCFWALVKGGKSERESEDALKETTSANKNELLFSQFGINYNEVDIMFRKGSVVVWKEVEEEVKPAVFRRRRRPMVVHDDLFDSAFYAAHPEILA* # ORIGINAL: g6039.t1 original gene structure, not modified by PASA NODE_2018_length_8073_cov_31.6153 AUGUSTUS gene 3669 6970 . - . ID=g6039;Name=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS mRNA 3669 6970 . - . ID=g6039.t1;Parent=g6039;Name=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 6113 6970 . - . ID=g6039.t1.exon1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 6113 6970 . - 0 ID=cds.g6039.t1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 5714 5916 . - . ID=g6039.t1.exon2;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 5714 5916 . - 0 ID=cds.g6039.t1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 5223 5325 . - . ID=g6039.t1.exon3;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 5223 5325 . - 1 ID=cds.g6039.t1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 4876 4938 . - . ID=g6039.t1.exon4;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 4876 4938 . - 0 ID=cds.g6039.t1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 4233 4641 . - . ID=g6039.t1.exon5;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 4233 4641 . - 0 ID=cds.g6039.t1;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 3669 4081 . - . ID=g6039.t1.exon6;Parent=g6039.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 3669 4081 . - 2 ID=cds.g6039.t1;Parent=g6039.t1 #PROT g6039.t1 g6039 MRAILKNFTLYLPDTLLEQSAPIPDLVKPVGSASTGAALDGAIFDHGSAHGGLPLTASAVDSIAPQWNVLGSNHASGLSGLSDPFAFASIPAKNDAPINAGAPTWQPEEGFSVPTAPASHPRAPPPPVAAESVLPLSQLAGAHNAHSAPTSDAAAPIAHAPSGVQRLSSADSFASFGDNSDDVDFSAFDSGGGSLGLSSAVTGPSLGGAGGVTGGNDGDGDDMDFGDFDGFEAPPPRAAGVLASSGVHGAAAAAQTSARRESEFGDFADFDGDDSADFEAFVLQVQPPSLGLGLAQQQQQAPSTAGTLDASADAHDVDTLAAHVQSIFKARPRSAVGIGGGAVRALAELNRREHPHLHWQSFSATNPPKFAWDGSAAEALLVESLRLKDLEAQAQANGLQPPLMPVSASGAQPLTAARMTSIPSGGADSPAFDASDPFALRSANGVVSPPPPVVSAPAVTAVTAVTAGAHVQAAALSPFEAAAGIGGASGSAQQQPHMGASQVHASGALDELADLFGAPSVAVARQTTGPSSASSGAANSADFDFDLLVSRQSAAVGHVTAAATPKRPTAEPPLPPQSASSVGGLPQQQPTHTPTRSSVANSAVAPPDAAVTPQRARAPSRPTRAPPAPPQASTGAPASTLPGIASGGVTSILSRLPDLSFMHATTLLPARSAVTAGSGDLL* # ORIGINAL: g6038.t1 original gene structure, not modified by PASA NODE_2018_length_8073_cov_31.6153 AUGUSTUS gene 91 3351 . + . ID=g6038;Name=g6038.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS mRNA 91 3351 . + . ID=g6038.t1;Parent=g6038;Name=g6038.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS exon 91 3351 . + . ID=g6038.t1.exon1;Parent=g6038.t1 NODE_2018_length_8073_cov_31.6153 AUGUSTUS CDS 91 3351 . + 0 ID=cds.g6038.t1;Parent=g6038.t1 #PROT g6038.t1 g6038 VDCLAGESADAPSCTPCDDDEAHCLRTDEMTALEAIAGPSFECPHPGVMRLTVGVDKLGEFSLEVRTGAKPLYPFEPPVVLVRHAALPAYARLALTAAANAAAREHVGTPAAYALSQWLESSAQAVLDALPKLTELRKWLGRLALAEGASVGTNEAEWEVLVDDAAHASGLGDASGHLPAPASGKKERPQRAGDVGDVAAESARLKRTLDAWRGEQRHARMRTQRAGLPSSAFAADIAGHVRTSQVVVIAGETGCGKTTQVPQFILDDAIDRMEGGACNIVCTQPRRIAALSVAARVADERGEAVGKTVGYSIRLETKQSRETRLMFCTTGILLRRMLGDATLSDGVSHVVVDEVHERSVDSDMLLAALRALVLSGTAPHLRIVLMSATADTTRLAAYFGGAPIVEIPGRTFPVTTFHLGEVLDVAGYELPMSGKRRVDENSSRDADEYEDSAPGGSGGSGGNIGAVPANARTGEGQLSERAQRSLAFCDAVDAAKDYGLIAAIVANASRRGWSGAVLVFLPGMEEIRRCVDVLQQRLPELAPDERFLLLPLHSALQPSDQQRVFAKAPQGTRKVIVSTNIAETSVTIDDVTHVIDSGRAREMGYDASADASCLVEGWVSRAAARQRSGRAGRTGPGRCYRLYSAARFDGMDAHAQPEMLRVSLSQLCLQALAMGHADPARFLSDALDPPAVEAVETAMRTLRDLGAIDRFHVGSDAPRDTSDGASPSSSSASDGYALTALGRHMAAIPAEPRVAKLLVYGAVFGCLSPALTIAACVGSRSPFLQPQDRRQEADAARIAFVGSGRSDLIGYSRAYAAWKEARRGGSSRERAFCEDKFLSVQTLCNIRDLRRQYRDSLTQLGFVRRHRREAIRGRKGAAQARGKKDADADGNAENGAADDHYADLASDEYDTRSDNERLLAAVIAASLYPSVARVVFPARTYQQIDAGTIAVAPSPSELRFVTRDGAQVRVHPSSVNSSHARFDDAPFLAFASRVRTAKDYVRDTTASSAHALLLFCGEVSVAHEAGIVTVDGWIRLAAPARIAVLVNGLRRLLDVLLARKMDDPRTSLARNAVIEALVRIVTTDGQ* # PASA_UPDATE: g8610.t1, single gene model update, valid-1, status:[pasa:asmbl_5458,status:12], valid-1 NODE_3037_length_4476_cov_51.1906 . gene 100 3751 . + . ID=g8610;Name=g8610.t1 NODE_3037_length_4476_cov_51.1906 . mRNA 100 3751 . + . ID=g8610.t1;Parent=g8610;Name=g8610.t1 NODE_3037_length_4476_cov_51.1906 . five_prime_UTR 100 101 . + . ID=g8610.t1.utr5p1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 100 285 . + . ID=g8610.t1.exon1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 102 285 . + 0 ID=cds.g8610.t1;Parent=g8610.t1;5_prime_partial=true NODE_3037_length_4476_cov_51.1906 . exon 642 692 . + . ID=g8610.t1.exon2;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 642 692 . + 2 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 936 985 . + . ID=g8610.t1.exon3;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 936 985 . + 2 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 1229 1323 . + . ID=g8610.t1.exon4;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 1229 1323 . + 0 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 1554 1650 . + . ID=g8610.t1.exon5;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 1554 1650 . + 1 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 1933 2027 . + . ID=g8610.t1.exon6;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 1933 2027 . + 0 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 2275 2389 . + . ID=g8610.t1.exon7;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 2275 2389 . + 1 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 2628 2730 . + . ID=g8610.t1.exon8;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 2628 2730 . + 0 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 2895 3007 . + . ID=g8610.t1.exon9;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 2895 3007 . + 2 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 3162 3329 . + . ID=g8610.t1.exon10;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 3162 3329 . + 0 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . exon 3564 3751 . + . ID=g8610.t1.exon11;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . CDS 3564 3707 . + 0 ID=cds.g8610.t1;Parent=g8610.t1 NODE_3037_length_4476_cov_51.1906 . three_prime_UTR 3708 3751 . + . ID=g8610.t1.utr3p1;Parent=g8610.t1 #PROT g8610.t1 g8610 DEARVSSPVTVRKSNATNNLGVGGGGQAQQARDQQPREQSTAFHGMPATYELQDFVPTFSRDRGQRQPQQVIADPLTAGPDIVVEEESAFNILTQDSYEEHRSRITHCRFSAEGNLVASVDADKTVKLWSLNPTPTTVASYTCPADVLSIEWETKTDRTLFVGLNNSCIKMYSTESKRLMGEILTDPEFPRVVELAYGSQVSLVSSAASAARMDEGALFVWNVRTNKLECTLPVHNSRTNSLCFSQNGKTLVAGGSDGMIRLFDMTMQNLFMGWQAHDGEVHSVQFSPDGNSIYSYGSDGKFVRWTQQRLGARLSEINIPSYPPSLSMAPQAGRFAFDASGEYILMGSPVNHGVIYEVNKPAPLIFLSGQSRPVVCVDWTPRYNACVTGSLDGTIRITKLIRAD* # ORIGINAL: g10981.t1 original gene structure, not modified by PASA NODE_4359_length_1745_cov_43.1383 AUGUSTUS gene 397 1745 . + . ID=g10981;Name=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS mRNA 397 1745 . + . ID=g10981.t1;Parent=g10981;Name=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS exon 397 472 . + . ID=g10981.t1.exon1;Parent=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS CDS 397 472 . + 0 ID=cds.g10981.t1;Parent=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS exon 836 1126 . + . ID=g10981.t1.exon2;Parent=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS CDS 836 1126 . + 2 ID=cds.g10981.t1;Parent=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS exon 1335 1745 . + . ID=g10981.t1.exon3;Parent=g10981.t1 NODE_4359_length_1745_cov_43.1383 AUGUSTUS CDS 1335 1745 . + 2 ID=cds.g10981.t1;Parent=g10981.t1 #PROT g10981.t1 g10981 MQLYMLHLTALYLAIFSTAVSAQVVDSCAGIPSVTFETCVGMREKANNAFCGWCLKSTAELASCVSEVTYNANKALCAAGFLRYFVVGEDGKQYATSTIYDTKKRTGSWEVEESEIKVALRPGETLTVPVTVQPNQCKNLDFYYLLDITGSMRGDLDNLKKLASTFTSTVSKLCNPTNPNPSGCSNSACANVGFGTFADKPISPIGYWRALQDADKVNFGDVPGQAFFKNQTSTAAFNYVFRNSLSLTAAGDGTAFTNA # ORIGINAL: g11761.t1 original gene structure, not modified by PASA NODE_967_length_15307_cov_29.5291 AUGUSTUS gene 999 3673 . + . ID=g11761;Name=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS mRNA 999 3673 . + . ID=g11761.t1;Parent=g11761;Name=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 999 1689 . + . ID=g11761.t1.exon1;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 999 1689 . + 0 ID=cds.g11761.t1;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 1811 1979 . + . ID=g11761.t1.exon2;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 1811 1979 . + 2 ID=cds.g11761.t1;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 2100 2388 . + . ID=g11761.t1.exon3;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 2100 2388 . + 1 ID=cds.g11761.t1;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 2549 2651 . + . ID=g11761.t1.exon4;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 2549 2651 . + 0 ID=cds.g11761.t1;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 2988 3673 . + . ID=g11761.t1.exon5;Parent=g11761.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 2988 3673 . + 2 ID=cds.g11761.t1;Parent=g11761.t1 #PROT g11761.t1 g11761 MVVRQWKNDYVNWASDNGCPLGEIGAIGWLPELDDTQEISYDEAITVFHNAMQAWQQTKSGCQVMCPSADDPGNSNGGACLWDGVFPYGSRVPVGRGSSSCATLWMIPPMTAGAPFGTCGCASPDDPKTNTEDPNMPCVWSYGDVPNGKAIYPGQTASCRLRMSMPYPINPSASHFYCSCVTNNDPGYFSNNCAYSGPYVPPNMQVVDGAVCFFPTTTSPDPITGVLKCEPRPGSPVPPNFLDKILSIPPRSFYDTSYWGIPYGSDRDSTLKAVSNDVSNYATADIRADYTNAILAPTVAENWLARMSSDSHNLRVTAAFSIPACNDACFDGVTSLLSEEFSDLSILSAWREVLDNVVISIQNEITAQIPIATSMVASSVQNPVTPPKPIAKIVMDIVGLALGVVATVVEGPLAIAIGILTGIAGDISSDPNDPYWNDKSQLYETIAVITSKINDAVMNFKASMRKRFSAVATNPLQLRMLASTLSSFAQGTLPTAADTATAIRNADIVIQQRLVRLFFAAMWSICYATTYGTRTSGDWYINCDSTTDHNYKIPYGRWYTMNVNMNNARWNIPSWFCPSGHYNNGEIPNTSVFVSAGNIQESSLISGFMTMSTDAKQPQNMQNLLNDGWSQAGLVKCPDCGQKHC* # PASA_UPDATE: g11764.t1, single gene model update, valid-1, status:[pasa:asmbl_10157,status:3], valid-1 NODE_967_length_15307_cov_29.5291 . gene 9702 14719 . - . ID=g11764;Name=g11764.t1 NODE_967_length_15307_cov_29.5291 . mRNA 9702 14719 . - . ID=g11764.t1;Parent=g11764;Name=g11764.t1 NODE_967_length_15307_cov_29.5291 . five_prime_UTR 14572 14719 . - . ID=g11764.t1.utr5p1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 13862 14719 . - . ID=g11764.t1.exon1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 13862 14571 . - 0 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 13702 13761 . - . ID=g11764.t1.exon2;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 13702 13761 . - 1 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 13260 13489 . - . ID=g11764.t1.exon3;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 13260 13489 . - 1 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 12862 12946 . - . ID=g11764.t1.exon4;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 12862 12946 . - 2 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 12528 12591 . - . ID=g11764.t1.exon5;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 12528 12591 . - 1 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 11830 12216 . - . ID=g11764.t1.exon6;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 11830 12216 . - 0 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 11402 11611 . - . ID=g11764.t1.exon7;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 11402 11611 . - 0 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 11019 11251 . - . ID=g11764.t1.exon8;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 11019 11251 . - 0 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 10706 10823 . - . ID=g11764.t1.exon9;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 10706 10823 . - 1 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 10313 10556 . - . ID=g11764.t1.exon10;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 10313 10556 . - 0 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . exon 9702 10049 . - . ID=g11764.t1.exon11;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . CDS 9892 10049 . - 2 ID=cds.g11764.t1;Parent=g11764.t1 NODE_967_length_15307_cov_29.5291 . three_prime_UTR 9702 9891 . - . ID=g11764.t1.utr3p1;Parent=g11764.t1 #PROT g11764.t1 g11764 MVSGHDMKRGRPHLVERAGSFSKKIAFGGESVIHINSDDAPADMIAPRTPRPTDDSLKPAAPLPHHSHDKTDSEICNDSGFAGDLSTPAGDELTDGNTATFTADLETERPHDEAETDTTCPFRARLIKEEMEKQGDTDDDVDAEDELRTSSLSHQLELIRKEVALREYNLRVEQHLVHREEEDADTMASDYADAELMRQSQMKERKRLEERAEAEAAELTEMMEAQRKQTAFLGKVRTMQDTIFNMEDIAAHVDETRRRLIRKRMSFNASILMIEERQKAERSLLTEMQKRKERKEKIRLEVHLRSLSPAEQKKARQLYRLTKPQRKVVQRKEAEQLRETQLLDQKHAAKKFELELSMLDAREQLEADQKKQLQPMREKHRLELKSRENGELDQQLRALHITEQQKLKAQQLIATQKREAKELRRKQKSQAKMREKARVREIRDEYAEMQARAKEGKSSDVRDTDSEADGSHASSHYTNSELSEVLTNDEDDSGGESLGDPDANEARRLLLETQKEELVSQLAKNEQTKAALLARQAQEMAELYATQMDETNSFLRTWQRKMKDLQEEHEDDLKIMRKDHAEEMEYLNAGHERELTNARLADELSAKLEDQHNEEVRLQEERQVSDRLLYQILPRSVAEKLKLGMAVEPEAFDLVTIFFSDLVGFTSISARSTPHQIVQLLNRLYTSFDAIVDRYDAYKVETIGDAYMIVSGLPIRNTNHACVMADLAMELRTAATQIDVSDQETDQLALRVGLHSGPCLAGVVGRNRPRYCLFGDTVNTASRMESTGEAFKVHVSTTTHALLIDTHILEERGAIDVKGKGTMSTYWLIGRK* # ORIGINAL: g11762.t1 original gene structure, not modified by PASA NODE_967_length_15307_cov_29.5291 AUGUSTUS gene 4573 5591 . - . ID=g11762;Name=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS mRNA 4573 5591 . - . ID=g11762.t1;Parent=g11762;Name=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 5472 5591 . - . ID=g11762.t1.exon1;Parent=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 5472 5591 . - 0 ID=cds.g11762.t1;Parent=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 4859 5006 . - . ID=g11762.t1.exon2;Parent=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 4859 5006 . - 0 ID=cds.g11762.t1;Parent=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 4573 4631 . - . ID=g11762.t1.exon3;Parent=g11762.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 4573 4631 . - 2 ID=cds.g11762.t1;Parent=g11762.t1 #PROT g11762.t1 g11762 MRKRKRKKRRKKRRKKIRKKRTEAEEVEEVEEVELNAERKSDEDAKLTFDQINSLVNDAADTFLPEFNIPSGPVLRYKHPKQDPTYPLSDDNDDFVGPDKLQTLTRDD* # ORIGINAL: g11763.t1 original gene structure, not modified by PASA NODE_967_length_15307_cov_29.5291 AUGUSTUS gene 5844 8537 . + . ID=g11763;Name=g11763.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS mRNA 5844 8537 . + . ID=g11763.t1;Parent=g11763;Name=g11763.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS exon 5844 8537 . + . ID=g11763.t1.exon1;Parent=g11763.t1 NODE_967_length_15307_cov_29.5291 AUGUSTUS CDS 5844 8537 . + 0 ID=cds.g11763.t1;Parent=g11763.t1 #PROT g11763.t1 g11763 MHRKSRNTGGGRSQEDPLLQLAHLQTMEGLSNIDAAKHLHTAIHAVESMCTVTVTAALLTGRRPPSLELQTSMRTMLRALIRVATLNMDARAFAGVPEADWNAVWKLVTETIQRISRVDADVSLLCDFFHCFALLRYHDLCSLQCRDALKEDDALGALLMSHAISNGRGDVVACGNAVCAIAEIHEYNATWVLANKEAVVLGCQALLSTTAVDTPAAMTDASVVRFVTHVSRHLIFEPSTWPRMVVDYERCAVAVGRDGGLFVSALANVHRRTTTSLSALIASAPTPPRGCYSIASAMLRITAHATFDAAEFKSPEDPQSPSFFFGLVTALKALKCTKGNQCTGIDCFCELRSAAMQFGAARACIQDLGDFIMRMGGLVQNGAVCPLLSAAVDCIAAPAQSSGLLSDASTADFQFACFTLSGAVEYCSRLCRRGADDMSATDSVPSEFERVFCQRHCVGVVSGLLARIGALSTAPIADVVAVWRGYVNRIDHLTTRNVAPLPLSAILAVGESNRTIVLTAAHRAVTAACAPANDLQRENNTRAALVKQGLLIPYKCFHAVSTLSGFHVTATSLPNIRAVYELVEVLLRHLAMDFIEAGELCRSYTQEVLHHVVRATGSLGVFRPGNSAGIDVCDEWLAAHPDAPLNTIVAVTGYMYEEFLLTIDPSSKTRGEVCSDLTDSCAPRAFMLRWLNARIAAMASLSSYSTLVGEPTRNSPPIVAAFPTVVRCAGAAGHFPAADASTMCLAAYCGSCYTDGASSNGVCVCGWWNVAPNGMADALVHVRANGAGDAPRKYAVHGKVDATGVTDVTNATDATDIARSGRVFTAARVEVPLQPLEPVEANRVGVNGASVTPGARVCNACGAHCVKLWKCSRCGGARYCSRECQKDAWPEHRKLCQ* # ORIGINAL: g3808.t1 original gene structure, not modified by PASA NODE_3819_length_2683_cov_17.3347 AUGUSTUS gene 1680 2360 . - . ID=g3808;Name=g3808.t1 NODE_3819_length_2683_cov_17.3347 AUGUSTUS mRNA 1680 2360 . - . ID=g3808.t1;Parent=g3808;Name=g3808.t1 NODE_3819_length_2683_cov_17.3347 AUGUSTUS exon 1680 2360 . - . ID=g3808.t1.exon1;Parent=g3808.t1 NODE_3819_length_2683_cov_17.3347 AUGUSTUS CDS 1680 2360 . - 0 ID=cds.g3808.t1;Parent=g3808.t1 #PROT g3808.t1 g3808 MAAKTQLSKCMKAAASKQANLRDYFKFAENIPKPEERLASKPSIATLLHSAQPVVITATEQTHYVFTDGSTLGNGKKTAVGGFGVFFGDGDPRNISEPYTNDVPTNQKTELTACIRAIKIVNRTMSNITPVVICTDSDYTIKCATVWYKAWMKNGWKMKAGEPVKNQELIKELIDLLQRPLTTMRHVRAHKKEPPKDSPDWFFWHGNHQADRLAVEGSRVSAAHRG* # ORIGINAL: g10973.t1 original gene structure, not modified by PASA NODE_828_length_17245_cov_38.4158 AUGUSTUS gene 97 4247 . + . ID=g10973;Name=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS mRNA 97 4247 . + . ID=g10973.t1;Parent=g10973;Name=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 97 152 . + . ID=g10973.t1.exon1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 97 152 . + 2 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 442 565 . + . ID=g10973.t1.exon2;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 442 565 . + 0 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 766 865 . + . ID=g10973.t1.exon3;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 766 865 . + 2 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 1285 1448 . + . ID=g10973.t1.exon4;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 1285 1448 . + 1 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 2444 2567 . + . ID=g10973.t1.exon5;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 2444 2567 . + 2 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 3529 3647 . + . ID=g10973.t1.exon6;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 3529 3647 . + 1 ID=cds.g10973.t1;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 4000 4247 . + . ID=g10973.t1.exon7;Parent=g10973.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 4000 4247 . + 2 ID=cds.g10973.t1;Parent=g10973.t1 #PROT g10973.t1 g10973 DGESEGSRSLWLPFELWRTIFSELDYVDLCRVSQVCRVFAHVTSDEALWRAVDFSTIDGATDGMISRVCRRFGPWLRSVNLRGCDRMTDAAIKEIADCCPDISCLMLGDCVGMSPDGIADAVTRLRSLTTLSLSGCHDVNDDCINTIGLTSLQIANCTSIRRWDFFPPDGRPLRTLRLDACHIDDDNLTPAQRGTLETISLLNCANLTDVSIVSLAEHSSRLNTVDLSGCYIITDVAVEAFAHHCLLLRRLHLSYCTNISERGLAHVLTTCARLSFVAIENCPNVAIAKVHALIESLTGKGSDRMLKVNW* # ORIGINAL: g10975.t1 original gene structure, not modified by PASA NODE_828_length_17245_cov_38.4158 AUGUSTUS gene 8056 9393 . + . ID=g10975;Name=g10975.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS mRNA 8056 9393 . + . ID=g10975.t1;Parent=g10975;Name=g10975.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 8056 9393 . + . ID=g10975.t1.exon1;Parent=g10975.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 8056 9393 . + 0 ID=cds.g10975.t1;Parent=g10975.t1 #PROT g10975.t1 g10975 MGGATAVLNDVKLHHVDNTPACHVHWQLVAEVIDGIFVEPLDATISSVVADSVTTLLECIAENRDSTWVSRALSLLAKIVSHVEGQKAALERGAVSSIIRLMCRTTNSDGGVVPSEGAEERATVRLSATKNHVITLTIDAMTVSVKSAAAAGDSAATEPRTTLFGTAVPGSTKSGALSSPTALPFTFRLPGSTENGAPPPTTAPPVAPMTFTLPGNTEYRASPPATAPSTTPVAIGKARKVRPGKGPAALFASQAELRKLYFGCEIETSSGAQGFNESVTLSAATTSPLTAARASPDPVILGCLTALVSLGACHNCLCAMVTGGCLRAVADVLRSGRLECIEQSLALVELMAKQVDCSDCTEGDTVYALDALLRLDVVVWSTVSGIGAMCALFATRLGKKCILARKEDVLRVLSLALGGEGEHCASTAERSAMVAALQSAIMGCN* # ORIGINAL: g10974.t1 original gene structure, not modified by PASA NODE_828_length_17245_cov_38.4158 AUGUSTUS gene 5398 8028 . + . ID=g10974;Name=g10974.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS mRNA 5398 8028 . + . ID=g10974.t1;Parent=g10974;Name=g10974.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS exon 5398 8028 . + . ID=g10974.t1.exon1;Parent=g10974.t1 NODE_828_length_17245_cov_38.4158 AUGUSTUS CDS 5398 8028 . + 0 ID=cds.g10974.t1;Parent=g10974.t1 #PROT g10974.t1 g10974 MACLSIHGDEGVVPQERSSPTQSDASCVDIISKLPVELLRSHILPRLNESDFVALSHVSTAYRSNFTPWREPLCLRQHFGRRFVAEEDFRRTVLNSLHPALRLHITLKQDSCEFWQRLPNCDGVSQSLRIHSMDLSFTSVRNVSALSGVHTLNLRHTWVTDVSSLGRVYSLDLSNTQVADVSALGGVHTLNLQHTCVTDVSSLGRVHSLDLTHTQVADVSALGGVHTLNLRHTCVTDVSSLGRVYSLDLSNTQVAAVSALGGVHTLDLSHTNVHDVSCLGHVHTLSLRECRALTDVSALGGVHTLDITFTSVVDVSSLGHVNTLVLSCCNAVTDVSALGGVYNLNLDFCANIRDIKPVLVVPFLHFSMRPDMVVKHLPYICDALSQGSVSTAAKSKAIEILFSSCPPGVWFCRSGSARRLIGLLFATVEAHLSNEMLCGRALEVIAIAVQAVLHDDSSFEFPCGAPHIVVCAMRMHSTSKCVQINGCDLVALLFSRTRNADVDGASFQDLYEQDVADAFEVAMAAADLLSGVVYVRSAGRLVGVHFVASALCNLARNATSAATALAMVDGGIIEKLILACTTQYYMTVYAFAAFDSLAKHRVCRERMAANGNALSLLKGVVELRIIFRILRTHFRDGGVVAAAIAFLDHHAKLRFTHTHTHTEAIHFLDDYADFLSLVRVVEEDSENVNPCVTIRDVRCGESECGNRMLACVAACFVRIVHVYGCLSPFGGRILAIITATKVMNCLRRCWDTAGGCDDGSAVRGSMVEWIAFILQPDWRLCVSSTKKFFTWSVPLLLELSAEIAVIVDRHPDEGTRKEAGVSLAHLDRLIGGKEMATGMFHTHTRYKLASIVREVRKGIDDRTLMHGHAKKDERQE* # PASA_UPDATE: g10976.t1, single gene model update, valid-1, status:[pasa:asmbl_9574,status:3], valid-1 NODE_828_length_17245_cov_38.4158 . gene 10104 13246 . + . ID=g10976;Name=g10976.t1 NODE_828_length_17245_cov_38.4158 . mRNA 10104 13246 . + . ID=g10976.t1;Parent=g10976;Name=g10976.t1 NODE_828_length_17245_cov_38.4158 . five_prime_UTR 10104 10247 . + . ID=g10976.t1.utr5p1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 10104 10373 . + . ID=g10976.t1.exon1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 10248 10373 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 10867 10974 . + . ID=g10976.t1.exon2;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 10867 10974 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 11234 11305 . + . ID=g10976.t1.exon3;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 11234 11305 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 11852 11977 . + . ID=g10976.t1.exon4;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 11852 11977 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 12488 12556 . + . ID=g10976.t1.exon5;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 12488 12556 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . exon 12929 13246 . + . ID=g10976.t1.exon6;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . CDS 12929 13024 . + 0 ID=cds.g10976.t1;Parent=g10976.t1 NODE_828_length_17245_cov_38.4158 . three_prime_UTR 13025 13246 . + . ID=g10976.t1.utr3p1;Parent=g10976.t1 #PROT g10976.t1 g10976 MASQPLFVATAAFKAALELINGLDDTKLPLVLVKIVQRLHLKEHTFSPEEKEQLVEVLEIEDTDLESVVETSSFIFEQSAYLNVKPDALGRHLIASGASEEKAQTFSAVWAREGSKYVSRLRDQPFFPTRLSSVNWSLNLQMSTASLAKLKSPAAFFDLGLDGETGEKDHVRIEFNHAQLLNLYNQMETVQEQLDQLS* # PASA_UPDATE: g10977.t1, single gene model update, valid-1, status:[pasa:asmbl_9575,status:12], valid-1 NODE_828_length_17245_cov_38.4158 . gene 13767 17103 . - . ID=g10977;Name=g10977.t1 NODE_828_length_17245_cov_38.4158 . mRNA 13767 17103 . - . ID=g10977.t1;Parent=g10977;Name=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 16429 17103 . - . ID=g10977.t1.exon1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 16429 17103 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 15534 16292 . - . ID=g10977.t1.exon2;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 15534 16292 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 15165 15309 . - . ID=g10977.t1.exon3;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 15165 15309 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 14891 15021 . - . ID=g10977.t1.exon4;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 14891 15021 . - 2 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 14699 14749 . - . ID=g10977.t1.exon5;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 14699 14749 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 14423 14557 . - . ID=g10977.t1.exon6;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 14423 14557 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . exon 13767 14109 . - . ID=g10977.t1.exon7;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . CDS 14035 14109 . - 0 ID=cds.g10977.t1;Parent=g10977.t1 NODE_828_length_17245_cov_38.4158 . three_prime_UTR 13767 14034 . - . ID=g10977.t1.utr3p1;Parent=g10977.t1 #PROT g10977.t1 g10977 MQALDTIIEFAQGCQENQRVLLKSHVITAVNHILRHGMQARKSIYNAKEGEDDKRATADILLLKSKCAALLHSMLEWNNPQSARIANELIDTLDARAVLLNLAQSLPKELKDNASAGEEELLECSDGESVSRCEFGFSLYIVTRRIGDLTGRPYAQEYVSTVFELPDPDEAPIKKPKKDEANSADSIAKYEAAVRSIEILRDGDIQRIHFKCTPKQRERLREEAKQHIFWNVDRSSPTGKVEDFIERCEKVMDEMGHVNTLMKQPVAHVIIHHSQVTYWMTVMVTVILNCIMLAGWHAPTVFIPADPNDNSTVDVVADTGSWKPQTNAWFMPTLSVFGAIHIALSVVLLMERFLLRPPTNLANCMKPMTIYYIVFLGLSIAGIPLKGYPYALHLFHIIINNDLLLRVITAVTRNGRSLLWVAALIIVIAYDYAVACFGWQRPEFNNDEGKFCGTLWQCFVTVLNFGIREGLAESIPTSGDFARVGVRAIMDLTFWIIILVIGLDLVFGIVVDTFSELRDERNSVLEDAEKSCFICSLRAYDFERYGRGFRHHVQNDHNMWDYVHYFIYLRNKDPTEYTSHEHFVMEMFKTKDSSMFPINKALCLQRGHEKIDSTLNDLKLQIQLLVQRFEQEDKRKAEDDGRRKRDEWERQQRVNA* # ORIGINAL: g11497.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 6803 14756 . + . ID=g11497;Name=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 6803 14756 . + . ID=g11497.t1;Parent=g11497;Name=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 6803 6962 . + . ID=g11497.t1.exon1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 6803 6962 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 7383 7489 . + . ID=g11497.t1.exon2;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 7383 7489 . + 2 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 7728 7790 . + . ID=g11497.t1.exon3;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 7728 7790 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 7986 8065 . + . ID=g11497.t1.exon4;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 7986 8065 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 8468 8944 . + . ID=g11497.t1.exon5;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 8468 8944 . + 1 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 9171 9329 . + . ID=g11497.t1.exon6;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 9171 9329 . + 1 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 9642 9717 . + . ID=g11497.t1.exon7;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 9642 9717 . + 1 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 9936 10122 . + . ID=g11497.t1.exon8;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 9936 10122 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 10344 10608 . + . ID=g11497.t1.exon9;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 10344 10608 . + 2 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 10916 11037 . + . ID=g11497.t1.exon10;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 10916 11037 . + 1 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 11661 12364 . + . ID=g11497.t1.exon11;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 11661 12364 . + 2 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 12615 12995 . + . ID=g11497.t1.exon12;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 12615 12995 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 13421 13488 . + . ID=g11497.t1.exon13;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 13421 13488 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 13758 13845 . + . ID=g11497.t1.exon14;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 13758 13845 . + 1 ID=cds.g11497.t1;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 14184 14756 . + . ID=g11497.t1.exon15;Parent=g11497.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 14184 14756 . + 0 ID=cds.g11497.t1;Parent=g11497.t1 #PROT g11497.t1 g11497 MRQDLFPSCFDLGPSEVNKTSIFLGSLFPTGYPSLKERNVHIQLALSHLRNRSDSWWDAENLLPNHDLRLVINDTQCKRDVGVKAALYQVTCGVAGIIGAGCSAVSAAIQILVQNFQTPQISPGSTLNALSDKAVYPYFLRTIVPDSWQGRVFASLCRNYGWRRVAIVHSEDDFGFGLAQQFRAITDGEIEVALQQVITDTMSVEQLMVKLLPIKSSNARIVLLFIVETAVQKLLRAAAAVGMLNNKRYVFIGPDTMAHEGSFLATNGTVLTDIKQSLLGVLGVLPQPGEGAVFERYMTLWKSLDPGQYYDADGDRNEINKYGSFAYDAAIAFAIAIDKVVAAGQSYMRGDLVLDALKQVSFLGVSGNVSFDSNGDRKSIKFDIKNMGANGWDTIGTFDISAGFKFTRAPLWPTNIVGAVPIDGTCPRDCSQNGVCGDDGVCSCYDGYVGLDCATISPHRLVGSVSLSSTAPCKQLVYFSVVADETTKVIVVSLVANVDLQTNSYHAGLIVQRGDASAGGAYALRYNSSDAIPTASGESTAQTHEIVVNGDDAYTGVYTIGIYGTESRCERFARYSLSTRDGMDCVADKHPGATVLVSVVFVVIAVQIGIIFYILRKAKRLEPPMVRRSIITRRSSNFVQLLSIAFQGFQFCAITLRSDVGWAFFKPLRSVFSVASLQFPFEAYFWVVFAFVIAWAWFAIPIYFSMRRFQKVRVWRVTKPLAGYILTLMGTIGYIPTLSVAMQPFACLMPAPCGSQAGYVDDTTCSMRCWQGQHWAYAIIGAIVLLVFFPLATASSHFWQECYDHEIKYRARYLILLSLARFAMSALFVFFAREQYAFYATIFAINAGMLYYNWLRQPCCVEWINPFQSTTFVVGAYTAAIAIIAKATDATVADGAERYWPIVTYLGGLGVILVVVLLWSRIEYPTKFPVINKKKMSVLAALKHQWSNMRAKSSVSVAPSQSSLKEDGKGHRTDSLISESNAFRHLMIARVDAWLEKGTITVRAAELLRLAIGRNNAALAVVFESAYMDDEATVALIHSMFDLCEGSQNAQSAVFRRRVSGTSEALRQSPNPPRALSVGSAPYPGSDAVDAFELTAMSTGKLHPHGKVSTISGAMFIEETQDAVVAAERGRDAGQMHAPMQDAVTAVTPASLGGVQDGDAVHQIDVDVE* # ORIGINAL: g11509.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 51793 52209 . + . ID=g11509;Name=g11509.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 51793 52209 . + . ID=g11509.t1;Parent=g11509;Name=g11509.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 51793 52209 . + . ID=g11509.t1.exon1;Parent=g11509.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 51793 52209 . + 0 ID=cds.g11509.t1;Parent=g11509.t1 #PROT g11509.t1 g11509 MSGRGKKTAETKAKAKSRSSRAGLQFPVGRIHRLLRKGAYAERVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRINPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIHNVLIPKKTGEKGEKGEKGSKAASSE* # PASA_UPDATE: g11500.t1, single gene model update, valid-1, status:[pasa:asmbl_7281,status:12], valid-1 NODE_43_length_52985_cov_42.8157 . gene 21020 22567 . + . ID=g11500;Name=g11500.t1 NODE_43_length_52985_cov_42.8157 . mRNA 21020 22567 . + . ID=g11500.t1;Parent=g11500;Name=g11500.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 21020 21082 . + . ID=g11500.t1.utr5p1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . exon 21020 21263 . + . ID=g11500.t1.exon1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . CDS 21083 21263 . + 0 ID=cds.g11500.t1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . exon 21443 21537 . + . ID=g11500.t1.exon2;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . CDS 21443 21537 . + 2 ID=cds.g11500.t1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . exon 21723 21914 . + . ID=g11500.t1.exon3;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . CDS 21723 21914 . + 0 ID=cds.g11500.t1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . exon 22069 22134 . + . ID=g11500.t1.exon4;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . CDS 22069 22134 . + 0 ID=cds.g11500.t1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . exon 22410 22567 . + . ID=g11500.t1.exon5;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . CDS 22410 22481 . + 0 ID=cds.g11500.t1;Parent=g11500.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 22482 22567 . + . ID=g11500.t1.utr3p1;Parent=g11500.t1 #PROT g11500.t1 g11500 MAAPVFQEGEALNLFHTAVGSVLQRWTALGLAVDHGWGGPESADKAEWLHDELVTLFTNDKKQLFEDDVVFFLEEIMQEEFETLPEDGSADEVARVVMHLARDIAAGNVQKVNDFIAKSAAKVKTGARTSVKAPGAEDSDDDDSDGQEDGSSHTQPAGGPMETSEADGPTPMDVETPNAPSGPDADGWEVVAGKKSGGRRR* # PASA_UPDATE: g11498.t1, single gene model update, valid-1, status:[pasa:asmbl_7280,status:3], valid-1 NODE_43_length_52985_cov_42.8157 . gene 15633 19118 . + . ID=g11498;Name=g11498.t1 NODE_43_length_52985_cov_42.8157 . mRNA 15633 19118 . + . ID=g11498.t1;Parent=g11498;Name=g11498.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 15633 15692 . + . ID=g11498.t1.utr5p1;Parent=g11498.t1 NODE_43_length_52985_cov_42.8157 . exon 15633 17051 . + . ID=g11498.t1.exon1;Parent=g11498.t1 NODE_43_length_52985_cov_42.8157 . CDS 15693 17051 . + 0 ID=cds.g11498.t1;Parent=g11498.t1 NODE_43_length_52985_cov_42.8157 . exon 17309 19118 . + . ID=g11498.t1.exon2;Parent=g11498.t1 NODE_43_length_52985_cov_42.8157 . CDS 17309 19093 . + 0 ID=cds.g11498.t1;Parent=g11498.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 19094 19118 . + . ID=g11498.t1.utr3p1;Parent=g11498.t1 #PROT g11498.t1 g11498 MAPIFFFGLSGAGKSTLMQSLCALHPHLFSMPSRLTTRPPKTGDVPGELEHVSREELLAMDARGELLFVMRQSEAVDSPLSAYRSSDLSASGCSGIPLLFCSIFNASDAQRVPGALVVHVRGDWHAGLSLRGGSERDARTALNESVEKHFRQLDAIADVSFTNTFSEATTDAQGLFVMLVHARAESTQSIASTRAHVRTESMDIVTADRHPPWPHVQHDAASISLECVTLGDVGPFIISGNVRRLSARQLGVDSPCKLAVRPGVGHWGDVVVVDVLPTGCNDSVSVRDADGTFRVGVPGRALRVVALLGNRESSTHVNGGVPPGGIHVGPSNTPDSQLNAGVQVTASGETASGGTHGADAAWLAGESGLVGVLWEQPTMANTLAEHSVACRTVGIVCFPKGHVREGTPVRADDVALRVTTGAVLSTPIVVVAGTSAEAGKTTMCEKLIRGLTERHGLRVAGIKATGTGGTQDSRRHRHAGAVVSFDQVDSGLPSTYVPENDFAERAMTPYLAAQDECVDVIVVELGGDIMWANNATLLKIPAFVGCVVRAFVIANDPMAAIGARVWLAAEAPLLSSTAVSLVASPFRNLAGMQQRADALGFPPFVDPNDAASLCAAAVDAMGKFAANFKLRSGHNTVSVQRNAIDAGLITCTPAPPPPTVEVTSSGVDASAGQAVILEDYWRQNGGMRAACLIPGHSRMSFELGTNATAIDRVTDVDVDFESLLRAAHARAGNVVIADSKHELVFGVGARQLLHASLYALRCIEGTTLRLTSVEPYYPLLARMGHVAPDTAVWAGVDCKWTGGMARSPSAGVEIADGPLVDIVVLPSNPTGAIREALPHATHAIHDLSYAWPHLMSSSSSLSPDSGQPAPSFPRCDSIMLFSLSKLSGHAGTRLGWAWVRNRDVARRMREYVRHMTIGVSGDAMERARTVLRRMFSDAKTGCEFYDGMVQHVRRTLSTRWSAVRLIVERSGGRLLLHGDETPTGWCYALFRDGADGSLWSHLSDAGVRATAGDQLGMPGLIRVNMMVSDDTFKVLTCQLVAFATAGL* # ORIGINAL: g11496.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 225 5451 . - . ID=g11496;Name=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 225 5451 . - . ID=g11496.t1;Parent=g11496;Name=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 5389 5451 . - . ID=g11496.t1.exon1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 5389 5451 . - 0 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 4293 5180 . - . ID=g11496.t1.exon2;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 4293 5180 . - 0 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 3775 3956 . - . ID=g11496.t1.exon3;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 3775 3956 . - 0 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 2125 3579 . - . ID=g11496.t1.exon4;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 2125 3579 . - 1 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 1131 1935 . - . ID=g11496.t1.exon5;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 1131 1935 . - 1 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 785 922 . - . ID=g11496.t1.exon6;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 785 922 . - 0 ID=cds.g11496.t1;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 225 323 . - . ID=g11496.t1.exon7;Parent=g11496.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 225 323 . - 0 ID=cds.g11496.t1;Parent=g11496.t1 #PROT g11496.t1 g11496 MASIGEGEIGGIAPENERQNMPMNFAPPQMIKFTSFSDYGARVPKRKAVHTADNREGAAQAIDPVRAPTPVKATTANNNDNTKRRQWEDAKDGSSGEEETVFRTLKAHPYVPRAHADLQNKKGASGSTAVRRRQASQAATSRATSTSVSVTRREDVELYPVHLTSWENRVVFEPYAAPFSEDERPASVLLNGRLHDGSWVDNIMWDEPVEVDMNDATGDAAGDGIANEEHRNGDGMGDHRGFNSVVNGRRPRLCFDMNDPQMHVLRAACMGVRSDRAKEIWKALGLTVERAPFIGEVGLVGAQRREAEEKERIEKEREHMKSLPPRLLPEAKRRQALERKVMTEYAKEERDAFNLSHDFFYRKKRDTTKVEHTRPALGLEKPHYRLSLTVQDMRLWHRPRLSNAQSNDDGTLIPWKISACPALLGDGGELDTDRVIQLDKDLSARDGKLVLFEYFEEYPPMLSNYGMASRVIKYVADAPSDTAPAKRAAKDKAAAKGDKGGASAGSAAGSAGAGAASGAASGAVMVGASGAVVPRASDTTVRATESKFGEIVRVGATEVSPFLSKLAPGEGLQALENNMYRAPIYEHAIPATDFIVTRTLEETSNGRVYKLCIRPADGLFCVGQLLPRMTVPDPVARSTRRLQRLRVVLYALRLMKNRQGDGLGGDLGDSQFSRKKTFMAADIFEAFKEEADKDTIRLLLTEKNADAEKASQLDGVFKSKGEKDTPSERFEYATKQKTRKLTKYILAHLKPETVCLYESMLAGVQRLRDAGYMNLRNAKDARDAEALGERRKEGLPYEIATMPWATTHDFRQGLTRLQVRGSANPASSLMAASYMLAPRRDTQAALKKKIVRMKQEEAKQILIHQFGMNPDIVMPMKSIDARKKAKSLIARQHKEAGNDAKQTTGVLTKANEEERQKIFFAMNKILSNTETKTADKVAKQADTTQAAAAAPEDSSSESSDDGSGSDADFGSSSADELDAGRSTAKAGGKAHVARGNGGGGSSNANIANTDGNAQRSGGRGGQGVPRELVIVHVLPEGGVRQTRLTDPRVIERYLAKTEAKRLHGPLDLHSVESQARRVFDSTPAKGKKGKGAERDSGKGKGKGKPGPKGGKRARESSSDDDDGRGKKRSKKDKYGDIDDVGTKRSNRNRLNSRVGDPLVPLRTLFEAILRKLIKLPEGAIYRKEIAKNKEFGAFYYKTIKNPRDFPMIFK # ORIGINAL: g11508.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 50416 51118 . - . ID=g11508;Name=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 50416 51118 . - . ID=g11508.t1;Parent=g11508;Name=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 51008 51118 . - . ID=g11508.t1.exon1;Parent=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 51008 51118 . - 0 ID=cds.g11508.t1;Parent=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 50747 50848 . - . ID=g11508.t1.exon2;Parent=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 50747 50848 . - 0 ID=cds.g11508.t1;Parent=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 50416 50613 . - . ID=g11508.t1.exon3;Parent=g11508.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 50416 50613 . - 0 ID=cds.g11508.t1;Parent=g11508.t1 #PROT g11508.t1 g11508 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* # PASA_UPDATE: g11502.t1, single gene model update, valid-1, status:[pasa:asmbl_7282,status:12], valid-1 NODE_43_length_52985_cov_42.8157 . gene 30944 34905 . + . ID=g11502;Name=g11502.t1 NODE_43_length_52985_cov_42.8157 . mRNA 30944 34905 . + . ID=g11502.t1;Parent=g11502;Name=g11502.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 30944 30974 . + . ID=g11502.t1.utr5p1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 30944 31068 . + . ID=g11502.t1.exon1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 30975 31068 . + 0 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 31230 31387 . + . ID=g11502.t1.exon2;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 31230 31387 . + 2 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 31724 31876 . + . ID=g11502.t1.exon3;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 31724 31876 . + 0 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 32017 33261 . + . ID=g11502.t1.exon4;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 32017 33261 . + 0 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 33417 33664 . + . ID=g11502.t1.exon5;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 33417 33664 . + 0 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . exon 33942 34905 . + . ID=g11502.t1.exon6;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . CDS 33942 34308 . + 1 ID=cds.g11502.t1;Parent=g11502.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 34309 34905 . + . ID=g11502.t1.utr3p1;Parent=g11502.t1 #PROT g11502.t1 g11502 MCGILFCAPGCRPGACAVRALQDAFPLVARRGPDYFGVVSGEGQSWACASSVLHLRGDKVTPQPIVDVDGNALQWNGEIFGGLEVAINENDGLSLSKALTDALSNTGTASWIREEVALRNAMEKIEGPYAFVYMRKSSNRVYFGRDPYGRRSLLWRRPVAQLPFLTIASVAPSTAPASHDNSVTMARYTTSDLHCTADTADSNARCCLCGSSNEYTHKDSQTDWPPWEEIPADGLRWVQLSPTEGAGMGDTAAIDADAMMRGMGWIAWNRPIGSGFCLDGARVPDAPDVRIDDCVRQFHSVLMDAVRRRVESIPPLPPCPHSAYACDVKRHVPPGTSSQQQVERSPQSHDSPGSTRPYMQTNADASTLPPTRVGVLFSGGIDCTVLASMIDRCLPPGEPIDLINVAFENSNSRGAPTVVAPVVVDGSRQKTAQTTATTAMTTAAVEMTSSSASTTLPRETWSSKKKKGTEKVGQKASATAGQDPDDPSPHVTDADPYAVPDRLSGMSSARVLASTSVSRREFRLVCVDVSRSMLDAHREHILDLLYPLDTVMDFSIAAAIWFAARGEGSATVFQSVADSADAAECVPSEPIVSASGAVSYTSGARVLILGMGADEQLGGYGRHRTRFAEDGVAGLAQEMHMQLCRIPKRNLGRDDRCISDCGKEARYPFLDEHVTSFLSSLPADVKADMTQPRGVGDKQILRLVAKQELGLPRECWALAKRAIQFGSRSAKMDSKGEKGCDRLKSAAAGSRDDE* # ORIGINAL: g11499.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 19448 20559 . - . ID=g11499;Name=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 19448 20559 . - . ID=g11499.t1;Parent=g11499;Name=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 20433 20559 . - . ID=g11499.t1.exon1;Parent=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 20433 20559 . - 0 ID=cds.g11499.t1;Parent=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 19996 20092 . - . ID=g11499.t1.exon2;Parent=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 19996 20092 . - 2 ID=cds.g11499.t1;Parent=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 19448 19658 . - . ID=g11499.t1.exon3;Parent=g11499.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 19448 19658 . - 1 ID=cds.g11499.t1;Parent=g11499.t1 #PROT g11499.t1 g11499 MAAMDVDGPAVEGAVDANEEERRRFQVELEFIQCLANPHYLHFLGQQQYFQDESFVNYLRYLLYWKSPEYAKFIKYPQCLYFLELLQNERFRGEMANKAKVEVIAHQQYNHWRFYAKNRAAAAMERAQQQQQQQQQQQLQKQQP* # PASA_UPDATE: g11504.t1, single gene model update, valid-1, status:[pasa:asmbl_7284,status:12],[pasa:asmbl_7287,status:12], valid-1 NODE_43_length_52985_cov_42.8157 . gene 37709 41131 . - . ID=g11504;Name=g11504.t1 NODE_43_length_52985_cov_42.8157 . mRNA 37709 41131 . - . ID=g11504.t1;Parent=g11504;Name=g11504.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 41070 41131 . - . ID=g11504.t1.utr5p1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 41011 41131 . - . ID=g11504.t1.exon1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 41011 41069 . - 0 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 40805 40917 . - . ID=g11504.t1.exon2;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 40805 40917 . - 1 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 40453 40617 . - . ID=g11504.t1.exon3;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 40453 40617 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 40097 40255 . - . ID=g11504.t1.exon4;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 40097 40255 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 39699 39851 . - . ID=g11504.t1.exon5;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 39699 39851 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 39375 39548 . - . ID=g11504.t1.exon6;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 39375 39548 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 39011 39169 . - . ID=g11504.t1.exon7;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 39011 39169 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . exon 37709 38774 . - . ID=g11504.t1.exon8;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . CDS 37942 38774 . - 2 ID=cds.g11504.t1;Parent=g11504.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 37709 37941 . - . ID=g11504.t1.utr3p1;Parent=g11504.t1 #PROT g11504.t1 g11504 MDAKFSWSLLDAKGARPSPRNGHAIASVSNVAYMFGGTGLNESEGEPIYFSDFYKLELGFTPTWKLIPPKGDVPCGRDGHSLTAVGNLLYLFGGSADADSEECLNDMYCFDPALGSWRLLDPAGAPPLPRSNHAAASVGSAIFIFGGFVEGEATNDIHIFDTGETVTCTWSTPQTIDKPPPPRCDHSLTPVDRKLYVFGGSGGEDVWLNDVYIFDCVTLAWGQPAINGSAPSKRDYHTAVPIATGDVPSIVIFGGLSGAAENYANFNDVHRLNLATMTWEHIRPSGLPPKARHGHSSFAFQGKMYSFAGSDEEGDLSDVWVLDITTGGVNQTAAAIGASISASLNRQAGGKSPARDNGTPITGSNTASHSSLGPESAQADGRSPSPRPLSRSRQASSSSGGSGVFPASIEGISSMLNTSSSTAFGPSSATQQQQQQQQLVQTPTQFQQQRRGSALAVRTSSVSSSSPGQPEKRDYEDLQMSITKRIFDIFDELRAESAALDAERLAIASKRSELIQDREAMEEEVREARAELSALAEKHAADNESWLAAQNELLAIERTKIAAEWDEVRAAREQLAAEKEAFTETSRRVNEVLKQFQGIAGVQP* # PASA_UPDATE: g11506.t1, single gene model update, valid-1, status:[pasa:asmbl_7289,status:3], valid-1 NODE_43_length_52985_cov_42.8157 . gene 46220 48519 . + . ID=g11506;Name=g11506.t1 NODE_43_length_52985_cov_42.8157 . mRNA 46220 48519 . + . ID=g11506.t1;Parent=g11506;Name=g11506.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 46220 46549 . + . ID=g11506.t1.utr5p1;Parent=g11506.t1 NODE_43_length_52985_cov_42.8157 . exon 46220 48519 . + . ID=g11506.t1.exon1;Parent=g11506.t1 NODE_43_length_52985_cov_42.8157 . CDS 46550 48061 . + 0 ID=cds.g11506.t1;Parent=g11506.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 48062 48519 . + . ID=g11506.t1.utr3p1;Parent=g11506.t1 #PROT g11506.t1 g11506 MTTGSVCVIDHNNRMAFPMDAHDGKHYSRGGGYKLPPPPSYASVVHQPPSMTDVGSMAPPDYSTHLGMQQHQHMRATAMHRAGWHGNFDEVDMMGPPQFDVMDPYFMYTQEPYGMPMGAYAHLDPAFESGMVDSESMRGQPPPYRSASAVGRVPSVGHYRPNYGSPHNDHHASKYNSPQMMHGSLLSGLAHLPDDYDAYGRQIEKLPDYGRHTGGHAPQHQHEFAHPLPVAPGRKKGSTAATAAPAAGPIDRSSSASSEEDSRSSGKASMGVVKVKAGGGRVRVRPRRTHTCTWEGCGKSYTKSSHLKAHVRRHTGEKPFECNYDGCGKRFSRSDELTRHKRSHSGVKPFECPVCDKCFSRSDHLSKHVKMHGSQVAKIYQYPQGMAHGGGPVSVALSRPPPPPSLPSALSHSRETIFHDESPAAKLSKKQQQQAAVAAAASAASAAASKASTQTTHAHAHAHTQGLKKATAGPHHPASQVQPLQLPAVWESQAQAHAKEMLI* # ORIGINAL: g11505.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 41405 45285 . + . ID=g11505;Name=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 41405 45285 . + . ID=g11505.t1;Parent=g11505;Name=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 41405 41464 . + . ID=g11505.t1.exon1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 41405 41464 . + 0 ID=cds.g11505.t1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 41661 41786 . + . ID=g11505.t1.exon2;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 41661 41786 . + 0 ID=cds.g11505.t1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 42003 43817 . + . ID=g11505.t1.exon3;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 42003 43817 . + 0 ID=cds.g11505.t1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 44016 44708 . + . ID=g11505.t1.exon4;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 44016 44708 . + 0 ID=cds.g11505.t1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 44872 45053 . + . ID=g11505.t1.exon5;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 44872 45053 . + 0 ID=cds.g11505.t1;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 45213 45285 . + . ID=g11505.t1.exon6;Parent=g11505.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 45213 45285 . + 1 ID=cds.g11505.t1;Parent=g11505.t1 #PROT g11505.t1 g11505 MAAFLQPTSETVALCDKVLQGLHHLYNNPDPKQKNVVQAWLVEVQKLDESWRLPWLLLKADQPVEAQLHGANTLRIRISQRWATLPDESIMSLRELIMAHLVGFATGPKIIRRKLCDVLAAFAMQAIPEYWSNFVADVLGMLQSMSTASPVDIQGLMIEFVAGLPGEMTQATLEAGRKKAVRGELGIAVPLVMQLIEHYLSPEQPIPLRTLALECLAHWIEFGLPLHAANNLLTLTIDAMSVEALFEPASEVISELASSTGGTKYPQTICRVIAGVLPACAAAANSGDDDIATAACKMLSELAVSHLRWLVAAPANLSLVAQLCEGMLCFLRVPGRYPVDETASENALVFWYELKEALAEVQRIDFESKTSHASQVEQTLMPIIAAALEALMAKASYPPDDEFSQWGSEERSRFMRTYRPDVGDAVSNIQEIMGDACTERLSAAVLATADGQQGWQAIEVALYLLKCVAEVIVRREAPQMCGVFASIGRGLPAHVLVQSAALHVVGAYAYWLARQPAYMDAAVPLILSCFASPRLATGAAAALSELCEACAIRLAPHAAALISAIAQATANSTLQAKAMRLLFQAMGNVISALTPSEATAHVIALAGASVSMMDAMTQAVRASPASLDDKVCGENIERAFQGISTLCAFVDPKKYEDQAPADTTELEELRLQLISQRQGDNSPHPVVRLLESIWDTFAQATYAWRAHPGACDAAAAVIVAAIRTSQLECMPLLDKIARLIIDCFDSSQRSLVEAAASLAGMLGLQREASRTLAVLLQSITARCLDVIANTNIRDQSDVISALFVVLSRLLRHCPLVVVEAGVLQETLACAQMAVVVPEPQSVKQAATFLVNMFKCASDPEVPRDHTKRGEYESGVAVAMQFREFIAPRGAEITGTVLQAIAGAAPLSAVPELAEVLYACARCGPGQLVQWLEICFKVEGFPVPHVTHEQKWRLIEALPRNVHKQKFKDLVRDFATLCQQPGK* # PASA_UPDATE: g11501.t1, single gene model update, valid-1, status:[pasa:asmbl_7283,status:3], valid-1 NODE_43_length_52985_cov_42.8157 . gene 23126 29724 . - . ID=g11501;Name=g11501.t1 NODE_43_length_52985_cov_42.8157 . mRNA 23126 29724 . - . ID=g11501.t1;Parent=g11501;Name=g11501.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 29536 29724 . - . ID=g11501.t1.utr5p1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . five_prime_UTR 29100 29343 . - . ID=g11501.t1.utr5p2;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 29536 29724 . - . ID=g11501.t1.exon1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 28868 29343 . - . ID=g11501.t1.exon2;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 28868 29099 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 28428 28621 . - . ID=g11501.t1.exon3;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 28428 28621 . - 2 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 28096 28300 . - . ID=g11501.t1.exon4;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 28096 28300 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 27676 27914 . - . ID=g11501.t1.exon5;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 27676 27914 . - 2 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 27338 27505 . - . ID=g11501.t1.exon6;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 27338 27505 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 26062 27160 . - . ID=g11501.t1.exon7;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 26062 27160 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 25242 25804 . - . ID=g11501.t1.exon8;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 25242 25804 . - 2 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 24721 24872 . - . ID=g11501.t1.exon9;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 24721 24872 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 24292 24437 . - . ID=g11501.t1.exon10;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 24292 24437 . - 1 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 24041 24108 . - . ID=g11501.t1.exon11;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 24041 24108 . - 2 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 23588 23680 . - . ID=g11501.t1.exon12;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 23588 23680 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . exon 23126 23415 . - . ID=g11501.t1.exon13;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . CDS 23245 23415 . - 0 ID=cds.g11501.t1;Parent=g11501.t1 NODE_43_length_52985_cov_42.8157 . three_prime_UTR 23126 23244 . - . ID=g11501.t1.utr3p1;Parent=g11501.t1 #PROT g11501.t1 g11501 MGSTIRSLEREYVQWREGWMHASIGARFPLQLPVTEIICSGVTTRTGGEGSPKSAGGIRVVLSMQCGSEKFTLRLSPGYPSASPIDVVQEMSKDDPTDQQASAANTWMIAIGEHTRLCTLLDELQCMFDVQHIDTLTRRSTEVFDATELPVLSTKDRDFIRAERQRAASARRAHDHEHAGSRARDSDDKAGGKRKRRRIDSGVALSPEDDETDSSCSSGDSHSGVGSAGNRTHSVGGTASVGTMSIACQEELLRSSPSWRLLRDFVEISSRVGQLGYQIEIVGGDIYRWMVRYDVRISNAHRRSPRLGSDVGGVSVELVFAPEAWPGFPPIARLVCPILPPPVYSEVTLFSALRPSVWDAHMKARSSLTPSGQVQPFGIAGTSAALLAHHLVEIGKAVSKCCDISTPIAAAYPRAHIEQTLANLAVTYGAEQLLRACATTAGIHAAFECCPMGQQQSTAAAMDVDTPDMALTGVPVATRTFTSGASASDLEVGGGSGVSAPTSGASEKQSMTSTEYWSRGVGYGHNKRPAWDVTAYKTAQKERNATMGSLLCTLLSQMRSAGDGKGDQKGDASSSAEPMEEVFAACERSAFLPIAESLLSQDNSLLEMQRHSGLYVALFDCLSFVAAHSVLGRLLVLPINENVVGGQSNEMASAPLAGVKGGKTVASLVHTHGALARQLIKRIAVAAPAQEDQPQIVPQTVVTDDGGASCVQDNEETFARALVALDEKVAIAVLRYTSSALLSGNVATHRASEAPTEMHVCCDLTAVKLPTARDYIHTMSSLLFQTGSIPLVGSHRHQFSKLVLPPPSTDTQAGAGAASTNPTATHHGLKAQGGSPSGGNAANSPSAAVNPNNKPKEAFSARRRILRIAQELDTLSTSLPLEATSAILVRTDETKMDLLQALIIGPEGTPYSGGCFLFDVYFPKDYPTVPPQVQLQTTGGGSVRFNPNLYANGKVCLSLLNTWEGQPGEKWAAETSTLLQVLVSIQSLIFVPSPWFNEPGYEKYLGTPEGDKNSSIYNQNLRVRTVQLAMLGILQSPPPCFDAAVKSHFFLRKEAVLAQCREWLADAAAVEQSVAGGKGNHRQELEKAVGELESLLGKLGDPRSTVIPA* # ORIGINAL: g11503.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 35004 37067 . - . ID=g11503;Name=g11503.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 35004 37067 . - . ID=g11503.t1;Parent=g11503;Name=g11503.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 35004 37067 . - . ID=g11503.t1.exon1;Parent=g11503.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 35004 37067 . - 0 ID=cds.g11503.t1;Parent=g11503.t1 #PROT g11503.t1 g11503 MDTFCAGSDADVTESSLYAYLAQRVEKLTKDLASVKSLLLLINEERKRAGKRPFSDLESSENCVGDEHGGMGAVFPPKKRRKLPVYSAVANDQCESQRSIIICENIDTSIASLDKGIVDMPSLHFPTFAPREFMPHDTVDNVNDSSTSPTTRYERSNSARSHEPSDKQTRHGLLELTPRSSAVHDSGAGAQGHGIESQGQGEDTPQQSTHVKSTEHSARAHDLPAGDCDERETCDGSESTARDGSTDDGGDESEYGADEGDVSTHDSTDDDESEPCESDYAPTPPTRRSRAHNRARTDDGDTHSGRSTVGAVAAADDEYFVLPRPLCRFEGEGQLEAALRSYTETTPPEVVRDAWVAYRRREKFRGVYGKITELKTKPSLRPSCADARRIVSFDKLTIARAVDLIQQAAKKGIWGLSFAVKGFDEAFQLSVRDVQALIRFNDDVLGYNDKMASVARACKASGLDSKTTAEVKAIAAHEAPHAVLLKKSSCLGLMTTHVLSMLRVHGEGGMAGAAAECIIAHADKNARGTAIKHPGCPERVLGLVHGRIVGLPHQKGDSLSVVIQEAGHWQLLRLDMSTSCTTLWTPSPSADAAAVIRARKRLAAAGAHMSTTSMTSFGRWPLAPCERAEVTAVDSCDESFFVAIALAETLSKGGDPDAMERRAHSPGIARAKWIRFFLNAIGRRGNQ* # ORIGINAL: g11507.t1 original gene structure, not modified by PASA NODE_43_length_52985_cov_42.8157 AUGUSTUS gene 49146 50187 . + . ID=g11507;Name=g11507.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS mRNA 49146 50187 . + . ID=g11507.t1;Parent=g11507;Name=g11507.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 49146 49802 . + . ID=g11507.t1.exon1;Parent=g11507.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 49146 49802 . + 0 ID=cds.g11507.t1;Parent=g11507.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS exon 50041 50187 . + . ID=g11507.t1.exon2;Parent=g11507.t1 NODE_43_length_52985_cov_42.8157 AUGUSTUS CDS 50041 50187 . + 0 ID=cds.g11507.t1;Parent=g11507.t1 #PROT g11507.t1 g11507 MPQYGAVAPSHPLRNCTCEKDVADALTANALEAPDVSVPTWRTRLHTVLESRKAHVIVIALVLIDAALVIAQLVLSDVDCNSNSNSNNNNNSVQMFCDSVSTNGLRSVCSSSAFIVLDAAGTHSQKFESVLHVIDIISLSILAIFVVEVALRIVGMGLRAYFTSWLHVIDLVLVYGSFGVEVWLFTGGNETAFSFVGLLVFLRLWRILRVVHAIMTSMEDEAKQKHDALHRRLHEVLDERDALRHQLGIPSTDIDTPDQQQLADAHI* # PASA_UPDATE: g3804.t1, single gene model update, valid-1, status:[pasa:asmbl_2719,status:12],[pasa:asmbl_2722,status:12], valid-1 NODE_1823_length_9056_cov_37.8228 . gene 5847 8316 . + . ID=g3804;Name=g3804.t1 NODE_1823_length_9056_cov_37.8228 . mRNA 5847 8316 . + . ID=g3804.t1;Parent=g3804;Name=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 5847 5887 . + . ID=g3804.t1.exon1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 5847 5887 . + 0 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 6111 6174 . + . ID=g3804.t1.exon2;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 6111 6174 . + 1 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 6414 6546 . + . ID=g3804.t1.exon3;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 6414 6546 . + 0 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 6746 6868 . + . ID=g3804.t1.exon4;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 6746 6868 . + 2 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 7163 7551 . + . ID=g3804.t1.exon5;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 7163 7551 . + 2 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 7698 7817 . + . ID=g3804.t1.exon6;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 7698 7817 . + 0 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . exon 7957 8316 . + . ID=g3804.t1.exon7;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . CDS 7957 8172 . + 0 ID=cds.g3804.t1;Parent=g3804.t1 NODE_1823_length_9056_cov_37.8228 . three_prime_UTR 8173 8316 . + . ID=g3804.t1.utr3p1;Parent=g3804.t1 #PROT g3804.t1 g3804 MDAIDVEDELELAKSIFKFDSGVAFSVRFAETFRGTFYDGNIDNTGMLIWPEALFMAEYLSTSPPWMRGRSVVELGSGTGACGIAAAVSVPLSLVVMTDREDSSLTLIQKNIADNTAAFKAHDVQCRRLEWGESTLLPAVSRANGGSHSPPATPTALGGSVEIGAHSSQSDITASFDIIIGAGVIYPREDADIVHLLFDTVALLLRRPCAPGAECGEGGENTVCGGGVFLCSYVQRNPATTQWMMEAASKHNLSIAHIATETFSSKRAPMDARLLAFYRSPSTSHVPPAQTASSCVCPSSLFVSSGVRASSFGATAESLFSGFSAQLDYTKVLLFGGKAAGDNAQPSEQWIAPFCDYDTLD* # PASA_UPDATE: g3803.t1, single gene model update, valid-1, status:[pasa:asmbl_2721,status:12],[pasa:asmbl_2723,status:12], valid-1 NODE_1823_length_9056_cov_37.8228 . gene 772 4630 . - . ID=g3803;Name=g3803.t1 NODE_1823_length_9056_cov_37.8228 . mRNA 772 4630 . - . ID=g3803.t1;Parent=g3803;Name=g3803.t1 NODE_1823_length_9056_cov_37.8228 . exon 3018 4630 . - . ID=g3803.t1.exon1;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . CDS 3018 4630 . - 0 ID=cds.g3803.t1;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . exon 2524 2685 . - . ID=g3803.t1.exon2;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . CDS 2524 2685 . - 1 ID=cds.g3803.t1;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . exon 772 2184 . - . ID=g3803.t1.exon3;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . CDS 1188 2184 . - 1 ID=cds.g3803.t1;Parent=g3803.t1 NODE_1823_length_9056_cov_37.8228 . three_prime_UTR 772 1187 . - . ID=g3803.t1.utr3p1;Parent=g3803.t1 #PROT g3803.t1 g3803 MYNEISYFHGRGGGASNKHAEDRSAPVDREMSEGHTHRRSHAHAERYEDGALPKQARRLAHDDAHGGPAAIPPDAQSGHEHMHDYSGEMDLPPRSDRESFVAGLPPLSGDSHDVSGRYTGSGHVYGSRYPGGGSGSGGYSYSSQYGFDDRDRGRNSYYPPQVQQMPGGRGGPIPEPRGHVTVEGRLDYIEQRIAELTTSMVDFRGDVNKMFREMFRMLSSTRERVPVDGTASLTPHQLPTPTQRPGLPPPHTQQQQPPHAHNNARHDDSPTPQRPPLQQQGQPTHTAHRTSVDASRGDGKTPAETQPRKKVRTMIAVPKEGDKGATAVTGDAASGNTEGSPSATHVTVGSAKKATPRAGDDETSRLGVRTGAVRVYNNHGILTGKGYVKAPSGEITAASIGNVPGTATDAGAGTGAARLDGDSARRALTEGGASGLSTPSQRQPGSTATSRYEMDASTKGPTHAQTKPTGHPIPRAAVGSYLLQLQKADLPVGRPGSGEGESRKRKNEADAEDDEPADKRPRYNLKVSASGARPVGLRHIIRLARSTVSNLRMKRRKQQPNLDIICSEQAMSNSGTTCLYPGCERNGVPLGSFRGLQVHWIRHLKDSRIFPCDFCDCWFPQQSAQLRHESEVHQHGVWRRLLAELVKMPRELRLQLPEELREEIDLAEANGAISDTEDSPGAPPLQLARVKASNTDSANSASANDDGECDHVTPVPGTAGSSEAASVPVDVVMSDVADDEKDEKGEKEEGISEPLVPVKITGVESNKATVDESVAVDSNSPPQKRNVEKDADAKEAQHKAIEDAKEKDIEREKKKDAEGDKSERDRDVDVDADAEDDKDKSGGEKNTPTVRLIVSRRQRPSRPATRPTVEHPIGDASEGDTPTAGKSDAKADSKAAHESDPKPSVAGGLRPRGTLTRRMILDV* # PASA_UPDATE: g3802.t1, single gene model update, valid-1, status:[pasa:asmbl_2720,status:12], valid-1 NODE_1823_length_9056_cov_37.8228 . gene 200 572 . + . ID=g3802;Name=g3802.t1 NODE_1823_length_9056_cov_37.8228 . mRNA 200 572 . + . ID=g3802.t1;Parent=g3802;Name=g3802.t1 NODE_1823_length_9056_cov_37.8228 . five_prime_UTR 200 200 . + . ID=g3802.t1.utr5p1;Parent=g3802.t1 NODE_1823_length_9056_cov_37.8228 . exon 200 572 . + . ID=g3802.t1.exon1;Parent=g3802.t1 NODE_1823_length_9056_cov_37.8228 . CDS 201 557 . + 0 ID=cds.g3802.t1;Parent=g3802.t1;5_prime_partial=true NODE_1823_length_9056_cov_37.8228 . three_prime_UTR 558 572 . + . ID=g3802.t1.utr3p1;Parent=g3802.t1 #PROT g3802.t1 g3802 QGHIPWITLTAFSAFVLLTTTFVSHTVAAIILIQPIAEIAYSIGHLRSIVMACAFMDSASMALPMSSFPNVNSLLVEDDFGRNYLHVWDYVKYGAPFSLIMLILMSSWGYFILETTFD* # ORIGINAL: g1206.t1 original gene structure, not modified by PASA NODE_843_length_16920_cov_42.0113 AUGUSTUS gene 13703 16813 . + . ID=g1206;Name=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS mRNA 13703 16813 . + . ID=g1206.t1;Parent=g1206;Name=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 13703 13764 . + . ID=g1206.t1.exon1;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 13703 13764 . + 0 ID=cds.g1206.t1;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 14015 14449 . + . ID=g1206.t1.exon2;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 14015 14449 . + 1 ID=cds.g1206.t1;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 14753 15863 . + . ID=g1206.t1.exon3;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 14753 15863 . + 1 ID=cds.g1206.t1;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 16075 16499 . + . ID=g1206.t1.exon4;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 16075 16499 . + 0 ID=cds.g1206.t1;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 16678 16813 . + . ID=g1206.t1.exon5;Parent=g1206.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 16678 16813 . + 1 ID=cds.g1206.t1;Parent=g1206.t1 #PROT g1206.t1 g1206 MSVNPITGETGRGDVGAMRRRDPFAPTRIAPSSTSAGMSFLEDQRVMYAQAVPDRSDRMMYSGFADANGGGSYRDAHRPAANQMAPSSPSSANWGIQIRAQPQHGLYSSGATAYGQHGVGVSSGMSSNASLSSGLGKFGKDAMSADSLAFLPPIATTSEPSSGRQSASSRPRSGTDVTFPAIPGANVVQSSYRSQQPSFDSPKVKALSTGHIDRTGAINSPDTIVRRPDRPNDPRNEPTVVTAGILAHTLAPLPSRARNSVPPAYDAHDTSVDKHNPISNDVGDDVVPRPPPTAAPANRKVIGNGFRRVHVASESERSEAVDDDGGSANNRDWNALRATSNYDKDEDHIPESLSASIDISGDSQPTRTTIDAKVGDGVDAVDRRNVDVRTLNSKHSHRRCNSEAVRDDAASTSVGDVTGDMARQSRDVAEPVDIISRDGVHAARESDVPSASPAPGSPARHVPVALGFKEIHPTGRSSDGISTSGNIVDVPTTPTMAPARPVHPTQATGMAVASAVPHSVAGADRPTSSPRAMGKPPRPEYQALSDESLDPDDIFGALSEDRQQHTVVAEVLSHRTRAVRASRASATAGIDALVVHVVSAGDNCLPVLVDLGPTLCSNLRRAAARARKAVVDGHTLSFLGENADGPAANSGPEGLMLPSSVSALCPLIAKLLLYKYENYLMGMLTLTSVLLRDWLPISASVIRAEVNRCADNDSAVGPAVSR* # ORIGINAL: g1203.t1 original gene structure, not modified by PASA NODE_843_length_16920_cov_42.0113 AUGUSTUS gene 4902 10352 . + . ID=g1203;Name=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS mRNA 4902 10352 . + . ID=g1203.t1;Parent=g1203;Name=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 4902 5193 . + . ID=g1203.t1.exon1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 4902 5193 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 5469 5866 . + . ID=g1203.t1.exon2;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 5469 5866 . + 2 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 6181 6314 . + . ID=g1203.t1.exon3;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 6181 6314 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 6639 6733 . + . ID=g1203.t1.exon4;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 6639 6733 . + 1 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 6901 6955 . + . ID=g1203.t1.exon5;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 6901 6955 . + 2 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 7268 7368 . + . ID=g1203.t1.exon6;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 7268 7368 . + 1 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 7647 7801 . + . ID=g1203.t1.exon7;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 7647 7801 . + 2 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 7944 8129 . + . ID=g1203.t1.exon8;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 7944 8129 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 8428 8496 . + . ID=g1203.t1.exon9;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 8428 8496 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 8696 8797 . + . ID=g1203.t1.exon10;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 8696 8797 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS exon 9177 10352 . + . ID=g1203.t1.exon11;Parent=g1203.t1 NODE_843_length_16920_cov_42.0113 AUGUSTUS CDS 9177 10352 . + 0 ID=cds.g1203.t1;Parent=g1203.t1 #PROT g1203.t1 g1203 MEVDEWPATTHASGLDDVPRVRHHARRMGSSSGGLHSMLSSRETALNVGARRRTLVEAKGKLVQNMRIDKTISERDSHGCIFHMGFNHDGSLLGATKSKYVHIYNPQTGRLLYRLDDHKEIVTSMAWFNEASTHSRDRTPVDMGSMDASDADCFQGDTSANSHVSVSPGAFFYTSSLDKTIKLWCDYRCISTYTEHPDWVRCLNVAPDNRTLLSGCVSATICGWDVETGSIRFRIPNSHESSMELNTINGLKFSSSDPNIFVSGARNGTVKLWDVRCIPTPSSSIQAHAVKLNTVTFNKAGSLLLSSGRDGCVRLWDTRSMRNCMDAKGSFVAEYTGHVCEKYNITAAFYNDERHVVTGSEDGSVWIYDVTTKEVVKRLQGHPNSVVHIAQPAPDEGVCPLSIATGSLESGDVLVWSPASHPDPPSAHSMHFTEMDSAIASEEASIGHDIPADDVHVTRRRAFTEGNVELTQDPARASRVIFDAFLRRHGERVINMLRMYGGDLVNARSVPELLRRARQEAESPEDAAEVEEIMRDFVESFRSFFSEQRQRMEERVNAQQQQQQLLAAQREQQQRQQQLLSSQEALGRLTPDPTSLRARHEEWRASVQRSLAQVTRRDSGGNRRDLRRPRMPHSRSRSSPATPLGSLSRQSSLVALERTAPRELFPIGIRSESPTVVSSAVGGRMDLLEEPLTAGHVNEMPSEQQPVCPVSAAQRAGRVDVSVSRDAEVFASSFGGLVALGGHMETKPSSADTSPSSSPLEFPFSSPWDSNGEQVSRATHTDHVPMVVGMSDGVYTPATIGSTVHSIPPPPFQLHSAVSARLRPFEASRSMSLNSPSFDHAEMTVEFEHMAHARSLSASETSTSFAHRERPHASIAHTMSGVINHVVIHSAGFGGISDERSMQSHDNVLAAPGAQSMDLS* # PASA_UPDATE: g1205.t1, single gene model update, valid-1, status:[pasa:asmbl_9645,status:3], valid-1 NODE_843_length_16920_cov_42.0113 . gene 11941 13039 . - . ID=g1205;Name=g1205.t1 NODE_843_length_16920_cov_42.0113 . mRNA 11941 13039 . - . ID=g1205.t1;Parent=g1205;Name=g1205.t1 NODE_843_length_16920_cov_42.0113 . five_prime_UTR 12954 13039 . - . ID=g1205.t1.utr5p1;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . exon 12903 13039 . - . ID=g1205.t1.exon1;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . CDS 12903 12953 . - 0 ID=cds.g1205.t1;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . exon 12499 12705 . - . ID=g1205.t1.exon2;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . CDS 12499 12705 . - 0 ID=cds.g1205.t1;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . exon 11941 12307 . - . ID=g1205.t1.exon3;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . CDS 12146 12307 . - 0 ID=cds.g1205.t1;Parent=g1205.t1 NODE_843_length_16920_cov_42.0113 . three_prime_UTR 11941 12145 . - . ID=g1205.t1.utr3p1;Parent=g1205.t1 #PROT g1205.t1 g1205 MARFVISGAADCVDFARAEAVADHFASNLPDFRVEKIMKHPSEWKSYLVETCEERKWHHDHSPMIWRKLGPKDAKLIGGCEEFIIMISRYYGEYPEIEASVLEEIAEENLKMCNEAREKAKEAEEEAARESGHDREEND* # PASA_UPDATE: g1204.t1, single gene model update, valid-1, status:[pasa:asmbl_9644,status:3], valid-1 NODE_843_length_16920_cov_42.0113 . gene 10818 11916 . + . ID=g1204;Name=g1204.t1 NODE_843_length_16920_cov_42.0113 . mRNA 10818 11916 . + . ID=g1204.t1;Parent=g1204;Name=g1204.t1 NODE_843_length_16920_cov_42.0113 . five_prime_UTR 10818 10895 . + . ID=g1204.t1.utr5p1;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . exon 10818 10949 . + . ID=g1204.t1.exon1;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . CDS 10896 10949 . + 0 ID=cds.g1204.t1;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . exon 11096 11199 . + . ID=g1204.t1.exon2;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . CDS 11096 11199 . + 0 ID=cds.g1204.t1;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . exon 11373 11916 . + . ID=g1204.t1.exon3;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . CDS 11373 11694 . + 1 ID=cds.g1204.t1;Parent=g1204.t1 NODE_843_length_16920_cov_42.0113 . three_prime_UTR 11695 11916 . + . ID=g1204.t1.utr3p1;Parent=g1204.t1 #PROT g1204.t1 g1204 MAVSSVFALLIAAVLFGQSSAYTYCYNCGQYLCSSSEYCCGCGCCTYGYAIWWVWLLVVLGIMLIFGIVFACIRRRRMRALELSSGTATAAVVVPPVYGAATTTQYYQAQPAGYAAYPQQQGYPPQQQYYQQGYPPQQQYPPQGYTEGEKPPAYANAPQ* # PASA_UPDATE: g1202.t1, single gene model update, valid-1, status:[pasa:asmbl_9643,status:12], valid-1 NODE_843_length_16920_cov_42.0113 . gene 108 3715 . + . ID=g1202;Name=g1202.t1 NODE_843_length_16920_cov_42.0113 . mRNA 108 3715 . + . ID=g1202.t1;Parent=g1202;Name=g1202.t1 NODE_843_length_16920_cov_42.0113 . five_prime_UTR 108 108 . + . ID=g1202.t1.utr5p1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 108 280 . + . ID=g1202.t1.exon1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 109 280 . + 0 ID=cds.g1202.t1;Parent=g1202.t1;5_prime_partial=true NODE_843_length_16920_cov_42.0113 . exon 492 640 . + . ID=g1202.t1.exon2;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 492 640 . + 2 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 1002 1081 . + . ID=g1202.t1.exon3;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 1002 1081 . + 0 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 1316 1400 . + . ID=g1202.t1.exon4;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 1316 1400 . + 1 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 1919 2070 . + . ID=g1202.t1.exon5;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 1919 2070 . + 0 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 2269 2365 . + . ID=g1202.t1.exon6;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 2269 2365 . + 1 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 2733 2855 . + . ID=g1202.t1.exon7;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 2733 2855 . + 0 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 3046 3201 . + . ID=g1202.t1.exon8;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 3046 3201 . + 0 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . exon 3478 3715 . + . ID=g1202.t1.exon9;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . CDS 3478 3582 . + 0 ID=cds.g1202.t1;Parent=g1202.t1 NODE_843_length_16920_cov_42.0113 . three_prime_UTR 3583 3715 . + . ID=g1202.t1.utr3p1;Parent=g1202.t1 #PROT g1202.t1 g1202 LPDGGYVLAGVSVEHPDHPELSGFVRANIVCGGFVIRPVEGEPMKTDLVYVAQVDLRGSIPSAVVNKVTAAQPMVVANVRNICDKLPDKEKYVEIAKLVPASSISSEALGRTEQSSLLSSSAASVAADSDLKASIPPQVPTVDWKQRLGDRAVIEFRTLANQAIADVMAEALETSQVTPSNAVTAKGNGWSIVNVEKNVVILKKAMPNSPINCVMGKGIINANAMDIYKFVKESTNRNVYDNMLKSIEVVARIDDNLFVMHMLHETNQCLMRHSRDFSILVQDRVDTTTGRYVVAGTSIASDLICREVPGVVRATVFASGWVMEPLDERRTMVTYVAQIDLKGNVPSRLINIISVKQPLCIAYLRKHMESLP* # ORIGINAL: g4415.t1 original gene structure, not modified by PASA NODE_3355_length_3662_cov_83.2615 AUGUSTUS gene 2093 3441 . - . ID=g4415;Name=g4415.t1 NODE_3355_length_3662_cov_83.2615 AUGUSTUS mRNA 2093 3441 . - . ID=g4415.t1;Parent=g4415;Name=g4415.t1 NODE_3355_length_3662_cov_83.2615 AUGUSTUS exon 3131 3441 . - . ID=g4415.t1.exon1;Parent=g4415.t1 NODE_3355_length_3662_cov_83.2615 AUGUSTUS CDS 3131 3441 . - 0 ID=cds.g4415.t1;Parent=g4415.t1 NODE_3355_length_3662_cov_83.2615 AUGUSTUS exon 2093 3053 . - . ID=g4415.t1.exon2;Parent=g4415.t1 NODE_3355_length_3662_cov_83.2615 AUGUSTUS CDS 2093 3053 . - 1 ID=cds.g4415.t1;Parent=g4415.t1 #PROT g4415.t1 g4415 MRAILLLCVCILLAAGGSRAIPMAADATADDGADMGGDGMLYVHPRSHVTFHPHIRQLSSKDVQDRQACHDASERCRITHETMDRLGLEEGTIVTSFTDDGDSGELIESADIEISADVPAAAEANGRQRRGLLSGLLGFLTSDQSFNINNYITAYKQGPNFNIAVKSFRFQINAVDGLKVFELILRASSKISVGIKAATPKLLAYDVEFLDTGSLTLGSVSFPVGPVPISISLVARNYLQVIGELDSQFKLDYGFQAEGYIEVGLSYDTAVSTDFRTIFNRGFKAGRYGQITTPSWDLSATVQSVAKLSAQIGIGIGPARVDFFGPYFRLIPCLQLVVSPTSYNATFFVNAKVGITGPSWQVLWFKLPALEWGKSFNLYNLPLEKGTWADLKFTQYIAKTLFDTTPAALADAGLTAGLQMDSM* # PASA_UPDATE: g9598.t1, single gene model update, valid-1, status:[pasa:asmbl_5741,status:12], valid-1 NODE_3224_length_3965_cov_38.8591 . gene 1284 3895 . - . ID=g9598;Name=g9598.t1 NODE_3224_length_3965_cov_38.8591 . mRNA 1284 3895 . - . ID=g9598.t1;Parent=g9598;Name=g9598.t1 NODE_3224_length_3965_cov_38.8591 . five_prime_UTR 3883 3895 . - . ID=g9598.t1.utr5p1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . exon 3571 3895 . - . ID=g9598.t1.exon1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . CDS 3571 3882 . - 0 ID=cds.g9598.t1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . exon 2712 3319 . - . ID=g9598.t1.exon2;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . CDS 2712 3319 . - 0 ID=cds.g9598.t1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . exon 2360 2496 . - . ID=g9598.t1.exon3;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . CDS 2360 2496 . - 1 ID=cds.g9598.t1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . exon 1905 2012 . - . ID=g9598.t1.exon4;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . CDS 1905 2012 . - 2 ID=cds.g9598.t1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . exon 1284 1715 . - . ID=g9598.t1.exon5;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . CDS 1348 1715 . - 2 ID=cds.g9598.t1;Parent=g9598.t1 NODE_3224_length_3965_cov_38.8591 . three_prime_UTR 1284 1347 . - . ID=g9598.t1.utr3p1;Parent=g9598.t1 #PROT g9598.t1 g9598 MASNDTLVYRTFARHWHSTIVSAGLFAHSSRLMRPYNPDKADTLLSRALRAWKWAEEYVSTEKKAGPHMYACLQLYISTGDDSFHKCFITEVDRVENGQLGYPQGFRPDYWNTDTMRQGQIFMDYFYDYLLLNHTGVTRYNTSAAPGARDTRPFPVDAATHKILRKWLGDKATEYASVSKSHAYPLGAPPNVGWGSVTAQGVFAETLLLEHRLTGDIELVAIAESLADYSLGLNPLGKSYTTGLGVDTPVTPLHCDSYFSEERGKGPIPGLTLYGPFSSAANIEYQARVWRKTYPNWYLLAEQRRFAEGWAFVDSNEFTTTWPMAPNAVMYATLAGLSGSADRVARSVDTTPANTFVYNPFHRAAFACTDGVCLVGAYIEGRWSRSWTAISNPDISVIDGVRVRDGVAIGRNASGVAFKSVDGGGVWTQIAEQERLDAFEDGFKPSRVLYPDAAAASDAPIHTLNDIAEGSIDGPFSVTSRGVYAFDEATGNAKMLALWKCVSSEVTCHR* # ORIGINAL: g9597.t1 original gene structure, not modified by PASA NODE_3224_length_3965_cov_38.8591 AUGUSTUS gene 187 892 . + . ID=g9597;Name=g9597.t1 NODE_3224_length_3965_cov_38.8591 AUGUSTUS mRNA 187 892 . + . ID=g9597.t1;Parent=g9597;Name=g9597.t1 NODE_3224_length_3965_cov_38.8591 AUGUSTUS exon 187 282 . + . ID=g9597.t1.exon1;Parent=g9597.t1 NODE_3224_length_3965_cov_38.8591 AUGUSTUS CDS 187 282 . + 2 ID=cds.g9597.t1;Parent=g9597.t1 NODE_3224_length_3965_cov_38.8591 AUGUSTUS exon 612 892 . + . ID=g9597.t1.exon2;Parent=g9597.t1 NODE_3224_length_3965_cov_38.8591 AUGUSTUS CDS 612 892 . + 2 ID=cds.g9597.t1;Parent=g9597.t1 #PROT g9597.t1 g9597 YIFLMCVHGFTLAVHRLVSCLNSDFDDIGCIGGNENGNTNWVIFIALLCFEGLLFGIFTFAIMCDQLCGLVDDATTVERLQHKERRKRSLMESLADVCGTRPSYQWLLPSDLPRKKLLQDTEVV* # PASA_UPDATE: g2961.t1, single gene model update, valid-1, status:[pasa:asmbl_8087,status:12],[pasa:asmbl_8088,status:12], valid-1 NODE_5468_length_838_cov_144.037_potentialcontaminant . gene 40 822 . - . ID=g2961;Name=g2961.t1 NODE_5468_length_838_cov_144.037_potentialcontaminant . mRNA 40 822 . - . ID=g2961.t1;Parent=g2961;Name=g2961.t1 NODE_5468_length_838_cov_144.037_potentialcontaminant . exon 40 822 . - . ID=g2961.t1.exon1;Parent=g2961.t1 NODE_5468_length_838_cov_144.037_potentialcontaminant . CDS 40 822 . - 0 ID=cds.g2961.t1;Parent=g2961.t1;3_prime_partial=true #PROT g2961.t1 g2961 MEPSFPLRGITMQADFLAFQKEVQVARDLRTPADKVLRTAMMRTMSTRAQKDIDTMSSLRFLKTPVLGAKHDSAGEPKPYLSVAPAFASATLFKARLRALPVHRNLQKQDNTIFEGVCTICRDNATEDETHFVLLCVALKEERSALFSALGKRGREIINALDRTTGGGKVITNGNNGNDSGNDTGAIDTLAARVLADLALMPKGKTFKGTKQHPVTLLHEMWRKRAELAEAAREGEVSAASAESPAHSIPRTPSPPLPAVR # ORIGINAL: g4822.t1 original gene structure, not modified by PASA NODE_2241_length_7102_cov_42.9399 AUGUSTUS gene 159 4934 . - . ID=g4822;Name=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS mRNA 159 4934 . - . ID=g4822.t1;Parent=g4822;Name=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 4761 4934 . - . ID=g4822.t1.exon1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 4761 4934 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 4171 4494 . - . ID=g4822.t1.exon2;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 4171 4494 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 3731 4045 . - . ID=g4822.t1.exon3;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 3731 4045 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 3308 3466 . - . ID=g4822.t1.exon4;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 3308 3466 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 2808 3113 . - . ID=g4822.t1.exon5;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 2808 3113 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 2532 2645 . - . ID=g4822.t1.exon6;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 2532 2645 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 2058 2312 . - . ID=g4822.t1.exon7;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 2058 2312 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 1756 1911 . - . ID=g4822.t1.exon8;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 1756 1911 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 1358 1621 . - . ID=g4822.t1.exon9;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 1358 1621 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 931 1110 . - . ID=g4822.t1.exon10;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 931 1110 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 529 692 . - . ID=g4822.t1.exon11;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 529 692 . - 0 ID=cds.g4822.t1;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS exon 159 262 . - . ID=g4822.t1.exon12;Parent=g4822.t1 NODE_2241_length_7102_cov_42.9399 AUGUSTUS CDS 159 262 . - 1 ID=cds.g4822.t1;Parent=g4822.t1 #PROT g4822.t1 g4822 MSIAAVSHRHVYGLKGDVKDNICYLDEQNIIYPAGSNIILYNIDQRTQRFITATERSEGITAMAVSPNRRYVAVAEKGEKASVAIYDLHSLRKRKSLIATDAQSTEFVSLAFSPDSKYLVTQGNSPDWVLTYWTWEKAKVMASVRSTNPQNMPVYQVSFNPQDNTQVCVVGNGIFRLYRYSEGNLKQFGFQKVDAQNYLCHAWLSEDRIIVGTDTSKLLLFEALELKAEYVNTFGPDKRPFSIECIVPYSKGFACSGDGGVVHLYDRSDDKDFYRKTKEIAIEGNAPMCKIKNLAISPSEEVLIGTTDTNQIYSLTLSNTEILKGEEVAFELLSQSFHHDAVTGLDTCVRKPLIATCGLDRSVRIWNYVENTLELVKYFQEEAYSIALHPSGLYVLVGFSDKLRLMNLLIDDIRPFKEFTIRGCREARFSNGGHLFAAVHGNVIQIYSTYTFENIGNLKGHNGKVRSISWTADDSHIVSCGMDGAVYEWQLSTFKREGENVLKSCSYTSAVVSGDGKTIYAVGSDKTLKEISDSQIVRDVDAKDTVLTQVSLSRSGRMLFTCAASGTVRSIKFPLTSPGEWQEHYAHSGSVTRMLISTDDQYLFTAGEDGCLYMFKISDREGRQLKRDKEMAYAEEILITKSDLEEKNAVMAELKTRVEELKMENEYQLRLKDMNYNEKIKELTEKFIQEMEALKIQNTVLKSEKDKEEARHDEEMVELRDRHQKELQEIEALNNQKLMSEYEKHQDLQARMLAVQESFERQLREMEQTKEQALEELTAYYESKLTEKIGDLDQANEESRQQFKEFDETKKQVEEDADREILDLKIKYEKKLKEEREA # PASA_UPDATE: g4823.t1, single gene model update, valid-1, status:[pasa:asmbl_3867,status:12], valid-1 NODE_2241_length_7102_cov_42.9399 . gene 5627 6889 . + . ID=g4823;Name=g4823.t1 NODE_2241_length_7102_cov_42.9399 . mRNA 5627 6889 . + . ID=g4823.t1;Parent=g4823;Name=g4823.t1 NODE_2241_length_7102_cov_42.9399 . five_prime_UTR 5627 5733 . + . ID=g4823.t1.utr5p1;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . exon 5627 5787 . + . ID=g4823.t1.exon1;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . CDS 5734 5787 . + 0 ID=cds.g4823.t1;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . exon 6075 6294 . + . ID=g4823.t1.exon2;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . CDS 6075 6294 . + 0 ID=cds.g4823.t1;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . exon 6478 6611 . + . ID=g4823.t1.exon3;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . CDS 6478 6611 . + 2 ID=cds.g4823.t1;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . exon 6784 6889 . + . ID=g4823.t1.exon4;Parent=g4823.t1 NODE_2241_length_7102_cov_42.9399 . CDS 6784 6889 . + 0 ID=cds.g4823.t1;Parent=g4823.t1;3_prime_partial=true #PROT g4823.t1 g4823 MSDDGSERSFADDQVNLGKYEGDRNENGKRHGFGKAILPSGDEYEGEYQEGMRHGKGTYKFVNGAKYVGEYHQNKKQGNGVFTYPDGSRYEGSWHDDMRNGYGTYYFVNGDVYEGEWSENLKNGQGTYTHADTNSKYQGSWRHGVRDGPAEWIHTNHRFVGQFTNNIPYGP # PASA_UPDATE: g8746.t1, single gene model update, valid-1, status:[pasa:asmbl_3842,status:12], valid-1 NODE_2233_length_7126_cov_70.7596 . gene 544 3247 . + . ID=g8746;Name=g8746.t1 NODE_2233_length_7126_cov_70.7596 . mRNA 544 3247 . + . ID=g8746.t1;Parent=g8746;Name=g8746.t1 NODE_2233_length_7126_cov_70.7596 . five_prime_UTR 544 545 . + . ID=g8746.t1.utr5p1;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . exon 544 702 . + . ID=g8746.t1.exon1;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . CDS 546 702 . + 0 ID=cds.g8746.t1;Parent=g8746.t1;5_prime_partial=true NODE_2233_length_7126_cov_70.7596 . exon 843 1526 . + . ID=g8746.t1.exon2;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . CDS 843 1526 . + 2 ID=cds.g8746.t1;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . exon 1790 2259 . + . ID=g8746.t1.exon3;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . CDS 1790 2259 . + 2 ID=cds.g8746.t1;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . exon 2462 2581 . + . ID=g8746.t1.exon4;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . CDS 2462 2581 . + 0 ID=cds.g8746.t1;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . exon 2969 3247 . + . ID=g8746.t1.exon5;Parent=g8746.t1 NODE_2233_length_7126_cov_70.7596 . CDS 2969 3247 . + 0 ID=cds.g8746.t1;Parent=g8746.t1 #PROT g8746.t1 g8746 ARNSFKLHITDPLTDTREVWTLICKSPAEKTTWLTASQKVMKKAASGSQKAQVVNRKTVARQAPAKLEKFFGQSAPPMQPPPPTPQRMSSLPSGASRPSTTMAPPSAPQPALPNIAPDAPSPLPTPRSDSLSLSASSGGTIRMKAAPPVEVAPPPPSHPAPPPPSHPAPPPPTHPAPPPPTVTAPSRAAEDVYALPQALTPTNSNKDTTERPLSVFAMAAAAKGPPPSAPVAAQEQEPAQYSAPSQSNYSIPSGARPLSVARDASIDDLEKMLSELATMQTPEHEYSTLPPPPAPDTRASVEEVIAESEAMAALAAAFSDLRSTCAKCAGVIADGQEGVFALGCAWHVEHFACAHCNKSLSSESYFESNGLPYCEVDYNRLYNCCVACSGLIDEREFVTLGDGPGRRWHKEHFCCTMCQTSLMACRVYERDGKLFCEAHFMSNAQSCGGCGQSIVSGQYLNALDKQWHVPCFKCSFKGCTKDFPDGAFHESGGMPYCEIHFFQLQNLLCKVCCTPLRGAFVQTASTRLHAECFSCVGCKRKLTLGEPAAELPLIDGKPFFKCSACLKNS* # ORIGINAL: g8747.t1 original gene structure, not modified by PASA NODE_2233_length_7126_cov_70.7596 AUGUSTUS gene 3532 6044 . - . ID=g8747;Name=g8747.t1 NODE_2233_length_7126_cov_70.7596 AUGUSTUS mRNA 3532 6044 . - . ID=g8747.t1;Parent=g8747;Name=g8747.t1 NODE_2233_length_7126_cov_70.7596 AUGUSTUS exon 4551 6044 . - . ID=g8747.t1.exon1;Parent=g8747.t1 NODE_2233_length_7126_cov_70.7596 AUGUSTUS CDS 4551 6044 . - 0 ID=cds.g8747.t1;Parent=g8747.t1 NODE_2233_length_7126_cov_70.7596 AUGUSTUS exon 3532 3555 . - . ID=g8747.t1.exon2;Parent=g8747.t1 NODE_2233_length_7126_cov_70.7596 AUGUSTUS CDS 3532 3555 . - 0 ID=cds.g8747.t1;Parent=g8747.t1 #PROT g8747.t1 g8747 MTSQPTASFSSLPVEVIECHSVPFLSNKDLASLAGVNSRLHCVLKHVRVCRLRPAFAKQYWESAAFRNAVWADIPRERLALELNGVHSVHGDLSVLGGVRSLTFSDCHGVTDVTALGGVHSLNLSKCREVTDVSALGRVNSLDLSYCHGVTDVSALGGVHSLILLTCKRVTDVSALGGVHSLDLSKCKRVTDVSALGGVHSLNLTNCYRVMDVSALGGAHSLNLSDCTGVTDVSVLGRVHSLDLSNCYRFTDVSALGGVHSLILSECRGVTDVSALTGVHSLNLSHCYRVTDVSALGGVHSLNLSNCKGVTDVCALGGVHSLDLSYCQGVTDVSALGGVHSLILSNCKSVRDVSALGGVHLLDLSKCKGVTDVSALGGVHSLNLTNCYRVMDVSALGRIHSLNLRYCEGVTDVSVLGRVHSLNLSGCGGVTDVSALGGVHSLNLSHCEGVTDVSALGGVHLLDLSGCNGVTDVSSLGGVHSLNLSFYKGVTDVSALGGTKMHFIN* # PASA_UPDATE: g9115.t1, single gene model update, valid-1, status:[pasa:asmbl_6403,status:12], valid-1 NODE_3682_length_2965_cov_39.8184 . gene 133 2869 . + . ID=g9115;Name=g9115.t1 NODE_3682_length_2965_cov_39.8184 . mRNA 133 2869 . + . ID=g9115.t1;Parent=g9115;Name=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 133 246 . + . ID=g9115.t1.exon1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 133 246 . + 0 ID=cds.g9115.t1;Parent=g9115.t1;5_prime_partial=true NODE_3682_length_2965_cov_39.8184 . exon 529 768 . + . ID=g9115.t1.exon2;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 529 768 . + 0 ID=cds.g9115.t1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 1018 1078 . + . ID=g9115.t1.exon3;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 1018 1078 . + 0 ID=cds.g9115.t1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 1274 1589 . + . ID=g9115.t1.exon4;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 1274 1589 . + 2 ID=cds.g9115.t1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 1838 2121 . + . ID=g9115.t1.exon5;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 1838 2121 . + 1 ID=cds.g9115.t1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 2400 2539 . + . ID=g9115.t1.exon6;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 2400 2539 . + 2 ID=cds.g9115.t1;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . exon 2770 2869 . + . ID=g9115.t1.exon7;Parent=g9115.t1 NODE_3682_length_2965_cov_39.8184 . CDS 2770 2869 . + 0 ID=cds.g9115.t1;Parent=g9115.t1;3_prime_partial=true #PROT g9115.t1 g9115 GKLTARERLELLMDPNTFREYDAFVEHQCNDFEMGDKKFTGDGVVTGFGKINGRTVYAFSQDFTVFGGSLSATHARKICKIMDKAMMVGAPVIGLNDSGGARIQEGVESLAGYAEIFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTMMVKDTSYMFVTGPDVVKTVTNETVTQEELGGAQVHTSKSGVAHCAYENETEALSKVRDLVDFLPLSNREKPPVRTSYTGDVANREEPSLDFIVPHDSMHPYDMKEVITKIVDESNFFEIQPDYAKNIIIGFGRLDGRTVGVVANQPREASGVLDINSSVKAARFVRFCDAFNIPLVTFVDVPGFLPGVGQEHGGIIRHGAKLLYAYAEATVPKLTVITRKAYGGAYDVMSSKHLRGDVNYAWPTAEIAVMGAKGAVSIIFRGSKDI # ORIGINAL: g13163.t1 original gene structure, not modified by PASA NODE_2827_length_5045_cov_38.2722 AUGUSTUS gene 252 2605 . - . ID=g13163;Name=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS mRNA 252 2605 . - . ID=g13163.t1;Parent=g13163;Name=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 2538 2605 . - . ID=g13163.t1.exon1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 2538 2605 . - 0 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 2202 2394 . - . ID=g13163.t1.exon2;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 2202 2394 . - 1 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 1843 2033 . - . ID=g13163.t1.exon3;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 1843 2033 . - 0 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 1420 1552 . - . ID=g13163.t1.exon4;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 1420 1552 . - 1 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 1108 1203 . - . ID=g13163.t1.exon5;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 1108 1203 . - 0 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 754 900 . - . ID=g13163.t1.exon6;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 754 900 . - 0 ID=cds.g13163.t1;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS exon 252 512 . - . ID=g13163.t1.exon7;Parent=g13163.t1 NODE_2827_length_5045_cov_38.2722 AUGUSTUS CDS 252 512 . - 0 ID=cds.g13163.t1;Parent=g13163.t1 #PROT g13163.t1 g13163 MSERKRKLDLTESDDNAMKRQNSSGAVPSVGDSSPYTGRPYSKKYFDILKKRLQLPVWEYREQFIKLLTENQTIVLVGETGSGKTTQIPQWCVEEMRRLQPNKCVACTQPRRVAAMSVAARVADEMDVTLGDEVGYTIRFEDVTSQKTMLKYLTDGMLLREAMGDPVLSRYSCIMLDEAHERTLATDILMGLLKEISRKRSDLKIIVMSATLDAGKFQQYFDNAPLLAVPGRTFPVEIFYTQEPERDYLEAAIRTTVQIHLCEGTGDILVFLTGEEEIEEACRRIKQDILGAGPTAGEVKVVPLYSTLPPNMQQRIFEAAPASREGTVGRKIIVSTNIAETSLTIDGVVYVIDPGFSKQKVR* # PASA_UPDATE: g13164.t1, single gene model update, valid-1, status:[pasa:asmbl_5084,status:12], valid-1 NODE_2827_length_5045_cov_38.2722 . gene 3190 4520 . + . ID=g13164;Name=g13164.t1 NODE_2827_length_5045_cov_38.2722 . mRNA 3190 4520 . + . ID=g13164.t1;Parent=g13164;Name=g13164.t1 NODE_2827_length_5045_cov_38.2722 . exon 3190 4520 . + . ID=g13164.t1.exon1;Parent=g13164.t1 NODE_2827_length_5045_cov_38.2722 . CDS 3190 4287 . + 0 ID=cds.g13164.t1;Parent=g13164.t1 NODE_2827_length_5045_cov_38.2722 . three_prime_UTR 4288 4520 . + . ID=g13164.t1.utr3p1;Parent=g13164.t1 #PROT g13164.t1 g13164 MGKDVVTVPTVAYEDLKRFVHAILKGAGVDDFSADAVTESLVETSARGTDSHGVRLLNHYMITVDDGGTTRCPNITHTSKFPCFVTLDADSGFGQAAGVRAVDVGMDIAEKYGLAVVTVINSNHPGAMWQYTVRAARKGYIAFGFTNTGPKILTHGGRDAYFGTNPICFAAPRKEEEPMCLDMATTIIPWNRVMHCKRTLEPLVPNVASDENGEMTTDPQDATHLLPIGSYKGFGLAAMVEILSTVVGGMPFGPHGIPMYGPGSSTSERRRLGQTYIILRADGCVSSDEFTASLQQMSDEIRGMTPAASNVAGRVMMPGDPEIIEAIRRKKWGVPLDDVIWGDFERMAAKYGVQLPPLLPSHCEQ* # PASA_UPDATE: g14084.t1, single gene model update, valid-1, status:[pasa:asmbl_2302,status:12], valid-1 NODE_1674_length_9845_cov_30.3021 . gene 128 1248 . - . ID=g14084;Name=g14084.t1 NODE_1674_length_9845_cov_30.3021 . mRNA 128 1248 . - . ID=g14084.t1;Parent=g14084;Name=g14084.t1 NODE_1674_length_9845_cov_30.3021 . five_prime_UTR 1213 1248 . - . ID=g14084.t1.utr5p1;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . exon 1000 1248 . - . ID=g14084.t1.exon1;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . CDS 1000 1212 . - 0 ID=cds.g14084.t1;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . exon 672 806 . - . ID=g14084.t1.exon2;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . CDS 672 806 . - 0 ID=cds.g14084.t1;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . exon 479 539 . - . ID=g14084.t1.exon3;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . CDS 479 539 . - 0 ID=cds.g14084.t1;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . exon 128 339 . - . ID=g14084.t1.exon4;Parent=g14084.t1 NODE_1674_length_9845_cov_30.3021 . CDS 128 339 . - 2 ID=cds.g14084.t1;Parent=g14084.t1;3_prime_partial=true #PROT g14084.t1 g14084 MSEPTPTPTSALAPPAPTTATPAAPVDVASAPPPTTATPPVEGPTKRLHVTNLPFRIREPELTELFSPFGELSSVEIIYNDRGSKGFGFVTFESLEAAEAARKAMHHKEFDGRKIEVNVAIPRGQIPARRDSSFRGGRGGYPGAYGSRDGYYGAAGRGGPPSGGAYGRGYGQQRDYGRPGPAPGRGGYGGYGGGYGHPEYDRAGYQQ # ORIGINAL: g14086.t1 original gene structure, not modified by PASA NODE_1674_length_9845_cov_30.3021 AUGUSTUS gene 6996 9340 . + . ID=g14086;Name=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS mRNA 6996 9340 . + . ID=g14086.t1;Parent=g14086;Name=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS exon 6996 8000 . + . ID=g14086.t1.exon1;Parent=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS CDS 6996 8000 . + 0 ID=cds.g14086.t1;Parent=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS exon 8255 8612 . + . ID=g14086.t1.exon2;Parent=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS CDS 8255 8612 . + 0 ID=cds.g14086.t1;Parent=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS exon 8928 9340 . + . ID=g14086.t1.exon3;Parent=g14086.t1 NODE_1674_length_9845_cov_30.3021 AUGUSTUS CDS 8928 9340 . + 2 ID=cds.g14086.t1;Parent=g14086.t1 #PROT g14086.t1 g14086 MPEKSFADADINSPITTVIRTSLAYSPDGKTIISGALYKSIPRSDSGTKLFAWHFNRKYVANATAFAVSTTSWFSVTVDETVALDFVVDSAGSLLLIYNDGVTDGLGIMPITDEEMGRIKGLQIALASPIVTVAASALSITKAQRLRAVLFRYKNINDNTNTDFVALTGFGLPAAPTNVVTPIAFFASFPSNSANVAYVSISDGQDYVQLGSLTQEPGLDCTDANPVTGVALCLVTNSRRSQTDPPSPSTVVTLVNIPVKAMESMDAKTGFVSAAVRGAAVFGNDDSLVAFASATDTTVTVELYDLKTSPFTLVNQEEGPEGIPFSSSDVEPGIPTSIGIWSSFRSDSLRPTLLVVSAWSQNLFAGLRGFTLRAALVGITDNVMKTVDISFNNVFGAPFKSAVSPNFEFPAFSFGPQFSTSQPMPIVQWFVADDIMSSNGLIGTGGPRWAVPGLATCEPVRISSGIQPVPRLCNVVPVDIDLSNQAIGSVRFEPATAAWGDITARGVGTLLSLKLPFDSIGGQLTVDGNENLAEFTAANLMRLTGGAIITGNKKLCLDDSIGLTYVRVHGNREWLVASNAPGCGSESWVLF* # PASA_UPDATE: g14085.t1, single gene model update, valid-1, status:[pasa:asmbl_2304,status:3], valid-1 NODE_1674_length_9845_cov_30.3021 . gene 1650 5468 . + . ID=g14085;Name=g14085.t1 NODE_1674_length_9845_cov_30.3021 . mRNA 1650 5468 . + . ID=g14085.t1;Parent=g14085;Name=g14085.t1 NODE_1674_length_9845_cov_30.3021 . five_prime_UTR 1650 1888 . + . ID=g14085.t1.utr5p1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 1650 1984 . + . ID=g14085.t1.exon1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 1889 1984 . + 0 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 2431 2780 . + . ID=g14085.t1.exon2;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 2431 2780 . + 0 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 3220 3370 . + . ID=g14085.t1.exon3;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 3220 3370 . + 1 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 3778 3917 . + . ID=g14085.t1.exon4;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 3778 3917 . + 0 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 4142 4260 . + . ID=g14085.t1.exon5;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 4142 4260 . + 1 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . exon 4728 5468 . + . ID=g14085.t1.exon6;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . CDS 4728 5209 . + 2 ID=cds.g14085.t1;Parent=g14085.t1 NODE_1674_length_9845_cov_30.3021 . three_prime_UTR 5210 5468 . + . ID=g14085.t1.utr3p1;Parent=g14085.t1 #PROT g14085.t1 g14085 MKESSVKLLNVVLMGLSFMLVFTSFQTSQSYQSTVLKNLGFSSDLGFNGLSVLYATFAVANFFSASIVLRMGPRLAMVFGAIFYGLFIASFIHVIEPVFYVASVLIGFGASVLWTAQGTLIAACSDEETRGRNSGLFWALFQFSVFIGSIIAYFIVPSDNSIPTSTVRTLYIALLGVCVAGIFLLFTLRPVPLSSLHLQDSSIVVPNGHKPMIESIKETFRMLGRTEMLLVSGVMIYTGLAPSFFGGKYPAMVGGNDPDCTDLPSAFKPRFIAFSMMCVGGSEIIGGFSLGYISDRIGRIPVLLFGLVLQLCAYALVYVNMVSRPFEPQPWLALVCAFLLGLGDSAFQTQIYATLGSLFPSENEPAFALYKFFQSVAAAAAFFYSGHLAIVGQLGLLAGFAIVGTIGHVVVETRRSRGVYAYKQLSVGETDTTYGSVHSVHEVDA* # ORIGINAL: g2514.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 9014 9682 . - . ID=g2514;Name=g2514.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 9014 9682 . - . ID=g2514.t1;Parent=g2514;Name=g2514.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 9014 9682 . - . ID=g2514.t1.exon1;Parent=g2514.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 9014 9682 . - 0 ID=cds.g2514.t1;Parent=g2514.t1 #PROT g2514.t1 g2514 MKGFDVDFVRNPHFRLGCFQRSGESSAIVFSIMVTKDVEGVGCRWDVSGAMANQLCADIASQLSLPLGTLWRIEWLGTQYVCMSLDVIDTHFFAVANAFLDRKCHLYFKDGTELNLDGGPDHIVLTLYTYWRAFADQMLRTWRDNDEPVPNQLPGIVSLCRFPINRDDLWGDDSELLAMAAEIRRRAALRGDRDFAVSGPSPDCLEGKAYRRHEWLWDKTAC* # ORIGINAL: g2517.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 12652 13908 . - . ID=g2517;Name=g2517.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 12652 13908 . - . ID=g2517.t1;Parent=g2517;Name=g2517.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 12652 13908 . - . ID=g2517.t1.exon1;Parent=g2517.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 12652 13908 . - 0 ID=cds.g2517.t1;Parent=g2517.t1 #PROT g2517.t1 g2517 MSSNAATLLPSFELALAQSFVQNNQYDLAHKWLLQAAESGNAIAMLELANLYMCGRGVGQDLIEAGVWLTRARNTVEVRNDVCVADGIAKNAVSVTENAVADTENAVSVTENAVASENEVGVTNAGVAKKAVEPNYAEFQWEKNREELDLEIEACELYGVYRALAEQASPAIAAKIVNSRLCRIYLKMTSAADANGIVHVARAITCTVINELADLCQFSLPPNDFPRKLSDLGSQFGKDVTETSTCVSVTTQLLHDGEAAKGRENKVRAAMAVFNVQAKVIGEMKKHSKFMETAQAKLDEFFMMENHLAFVVFSELLNLRAVDYTQWRTVPTFNDKSDMKTARLLAFQAAQMINPSLSDEDMHAFATNHACEFKRIVDIDLCTCGNNSLVDVVTWLHKHYGKTSAIAVLKTLVLIYFT* # ORIGINAL: g2515.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 10227 10496 . - . ID=g2515;Name=g2515.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 10227 10496 . - . ID=g2515.t1;Parent=g2515;Name=g2515.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 10227 10496 . - . ID=g2515.t1.exon1;Parent=g2515.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 10227 10496 . - 0 ID=cds.g2515.t1;Parent=g2515.t1 #PROT g2515.t1 g2515 MKRDSVMNHDGVMKHDGVMKHDSVMKHDSVMKRDSVMKHDGVMKHDGVVKHDGVMKHDSVMKRDSVMKRDSVTTHDSVLCYYARLCYVY* # ORIGINAL: g2518.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 15026 16468 . - . ID=g2518;Name=g2518.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 15026 16468 . - . ID=g2518.t1;Parent=g2518;Name=g2518.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 15026 16468 . - . ID=g2518.t1.exon1;Parent=g2518.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 15026 16468 . - 0 ID=cds.g2518.t1;Parent=g2518.t1 #PROT g2518.t1 g2518 MGQLFSTPEAPDVFNPSVVRRTDNEARAANVAVASLLKRTNAGWPIAGFVELLVRCHKVSELYSKIPAVFQQGVHRQIYAFLSRHAHMLITDTFRADIASRTLLGVKGCGKTVALKNFAEVASLAHGPRLIVLYVDCDVHPTLSMRLFERIYPSLVAAGVPLRVDPRAVRAKHVSEALQACGKYLLLLVDEFECVFKADNPVASEAGVGTVFDLISFCSESAGRVAPILCGSSSLMQLVTNKGREDVHLCMRFPLLRRVVSMNGTKFHAMPLIYSVATDMAAFDELAPDAPLADRRVLAFFVGTNARLFIKLREEARDIRARLDAGERLEATVQCFQSVLAPSSKQDAALDTALGDFLARLFRAFRKANEALVDAVIDLDSKRVVLKRIGELEWESFKPLSFQEVVQIHDTLPNRRPGTKALSDWRFLVDRGWFGERNECLYPSRFIDVVAFAMKGEAGGFPLNQDDDGFDIVVKILAGK* # ORIGINAL: g2512.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 3080 6618 . - . ID=g2512;Name=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 3080 6618 . - . ID=g2512.t1;Parent=g2512;Name=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 6596 6618 . - . ID=g2512.t1.exon1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 6596 6618 . - 0 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 6074 6145 . - . ID=g2512.t1.exon2;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 6074 6145 . - 1 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 5879 5950 . - . ID=g2512.t1.exon3;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 5879 5950 . - 1 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 5720 5791 . - . ID=g2512.t1.exon4;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 5720 5791 . - 1 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 5049 5268 . - . ID=g2512.t1.exon5;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 5049 5268 . - 1 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 4875 4973 . - . ID=g2512.t1.exon6;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 4875 4973 . - 0 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 4522 4707 . - . ID=g2512.t1.exon7;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 4522 4707 . - 0 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 3719 4406 . - . ID=g2512.t1.exon8;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 3719 4406 . - 0 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 3396 3610 . - . ID=g2512.t1.exon9;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 3396 3610 . - 2 ID=cds.g2512.t1;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 3080 3247 . - . ID=g2512.t1.exon10;Parent=g2512.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 3080 3247 . - 0 ID=cds.g2512.t1;Parent=g2512.t1 #PROT g2512.t1 g2512 MLAVAAALDWSNKQLTSIASGLFDGLAGLKTLQLNSNQIATLPSGIFDKLTALTSLQLNSNQIATLPSGIFDKLTALTSLHAPARTERRAIDSPDRARAPPAGRAPHAMSSAPADNTDRIVPSHAHVATGVATVSTALVHASKGRAFTDRLAHHARATVEFATMASSAPELATAVLYSALVAHTAIVTATVELSQYGIGASLAELSQYGFGGIGVRLRWYHDDVGPRAWNNTWRYEINRAGCLPKVYQVGDVLTFLDTDVVSNQGYTYFVRAYNSRNVSSETSGVAGIRNVQEIVLPAPPSDVSSTPMLNPVNQRPMIELTWKEDTRAGGILKTFIFRDDRLVLQGPMVTEYNDRDVVFGKTYVYEIISMNLYGTSNGTRFSETASVGPSDSGTPTTTGASSSGNVAGPVAGGIVGAIVGAAGIVFAILFVRERMSHKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNKIGEGEFGEVYLADITPRGGSVAEIKAVVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKISDFSSTDLLCFCIGKKPKSHVHDINHFILF* # ORIGINAL: g2513.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 7161 8699 . - . ID=g2513;Name=g2513.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 7161 8699 . - . ID=g2513.t1;Parent=g2513;Name=g2513.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 7161 8699 . - . ID=g2513.t1.exon1;Parent=g2513.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 7161 8699 . - 0 ID=cds.g2513.t1;Parent=g2513.t1 #PROT g2513.t1 g2513 MDRANNTNDDPRFWGQCDWCSETRQLRHLAAHVANCHQGPITRVLKTLRSLDRAQNIENNRIWSQLNVYSESLTAIQQANSCDAATTLAATKKEIQDVATKSQDTLAMARKVNATMLSRITDASENFSTVQVATAKACKKFADFRREMETSRDEVFAARNAIKQARDEADAFYTNSKAADVDSALSAIAALKSTMETALETALETALAATVESATLRAEIDALQEKVASQATALAAVIAARTTPTATQMDDDCSNTNSDDSGAPITDVSGAPITDDSSAPITDDSGAPITDDSGQSSIVDSSAPITDDSGAPITDDSGVSIVDDSGAMHTDSGALITNDSSALNTDDSGALNTDDSGVSITNDIPIRRRKRDDSPTRYAPPVKMGRWDNSDGDSSDSSDSTSCDTSRDSNSLFFKLPDVAVPVGETALSAAVCSFLTAPRLTLATTAHDFMSGKTVSWDYIVSLEEPPVDGYVSRPWLIRVSPDVLEAALEMVDPTEVETSGAWGVMFSRRI* # ORIGINAL: g2516.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 10569 11168 . + . ID=g2516;Name=g2516.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 10569 11168 . + . ID=g2516.t1;Parent=g2516;Name=g2516.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 10569 11168 . + . ID=g2516.t1.exon1;Parent=g2516.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 10569 11168 . + 0 ID=cds.g2516.t1;Parent=g2516.t1 #PROT g2516.t1 g2516 MDLKWLIGTSTLTRERVNDRKVMSLNATSLNAILTDLLKGDILGKYLKNSMYSSQSKTVIVECFSDEDVDPLIVGGVPSRRQIALSLLKWERVCMKDDKVCIVCIPRSRNDVLCEADAEIYQTEKGHVTVAICNFTAEEFIAEYPEWSHASFVSRIAKAKETLRLYRPITGSIEVVPGLFITRTSTDSMKLTELPLKVM* # ORIGINAL: g2511.t1 original gene structure, not modified by PASA NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS gene 2006 3033 . - . ID=g2511;Name=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS mRNA 2006 3033 . - . ID=g2511.t1;Parent=g2511;Name=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 2999 3033 . - . ID=g2511.t1.exon1;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 2999 3033 . - 0 ID=cds.g2511.t1;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 2720 2911 . - . ID=g2511.t1.exon2;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 2720 2911 . - 1 ID=cds.g2511.t1;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 2497 2630 . - . ID=g2511.t1.exon3;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 2497 2630 . - 1 ID=cds.g2511.t1;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS exon 2006 2388 . - . ID=g2511.t1.exon4;Parent=g2511.t1 NODE_825_length_17282_cov_25.3736_potentialcontaminant AUGUSTUS CDS 2006 2388 . - 2 ID=cds.g2511.t1;Parent=g2511.t1 #PROT g2511.t1 g2511 MEHLAKCEIVHRPRDLAARNCMVVAGPRPPNSIENYWKLSPKAQVIVKVADMGLSRDTGASDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMEACWRKHAETRPQFSPLVRQLRRGMTALCGTEGGGGEGGGGYLDGANATDNALEQSETYALTVPESAYAETLKPGEEGRFHRLYTLENVTFQKDSNAMTGHSST* # ORIGINAL: g11531.t1 original gene structure, not modified by PASA NODE_2469_length_6160_cov_34.2672 AUGUSTUS gene 184 2330 . - . ID=g11531;Name=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS mRNA 184 2330 . - . ID=g11531.t1;Parent=g11531;Name=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS exon 2148 2330 . - . ID=g11531.t1.exon1;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS CDS 2148 2330 . - 0 ID=cds.g11531.t1;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS exon 1566 1781 . - . ID=g11531.t1.exon2;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS CDS 1566 1781 . - 0 ID=cds.g11531.t1;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS exon 1007 1087 . - . ID=g11531.t1.exon3;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS CDS 1007 1087 . - 0 ID=cds.g11531.t1;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS exon 680 736 . - . ID=g11531.t1.exon4;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS CDS 680 736 . - 0 ID=cds.g11531.t1;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS exon 184 352 . - . ID=g11531.t1.exon5;Parent=g11531.t1 NODE_2469_length_6160_cov_34.2672 AUGUSTUS CDS 184 352 . - 0 ID=cds.g11531.t1;Parent=g11531.t1 #PROT g11531.t1 g11531 MTTFADIPTPTQYTCYGIMNVLGKPDDEDVTVSNVGDYYRYDCNSFLDFAAMNSKKATTFMVTLYDTSNAPSPVFNDAKGSIGIGCNRRCLEVTISLPPTFAFSGIVKINYKYPSRGKYYPFSIDAITAIGVPLDPLCRNCRAVYEMRRSEVGSGAVRILPVPFGDILAGPRRRFIDTTIDPAKSYTYEVRIRRDYADASDAWSPYSPVSPPYKIGMLCGDGIVDDFPNTEECDD # ORIGINAL: g6078.t1 original gene structure, not modified by PASA NODE_1616_length_10173_cov_42.3847 AUGUSTUS gene 1780 3183 . - . ID=g6078;Name=g6078.t1 NODE_1616_length_10173_cov_42.3847 AUGUSTUS mRNA 1780 3183 . - . ID=g6078.t1;Parent=g6078;Name=g6078.t1 NODE_1616_length_10173_cov_42.3847 AUGUSTUS exon 1780 3183 . - . ID=g6078.t1.exon1;Parent=g6078.t1 NODE_1616_length_10173_cov_42.3847 AUGUSTUS CDS 1780 3183 . - 0 ID=cds.g6078.t1;Parent=g6078.t1 #PROT g6078.t1 g6078 MAGIGAAASTPGVVVIFLPQGYDPLSKMSLSALGVGNERGALTDTDSPLKAPLFPFPSRPPTSLSSLATMAPAFGAHFTLNNGGPASSQSTLLSPHTIPQPMGTVVDIGLLDAQRLAMREPRVKRPMNAFMLWSSEERVKISRQDPSLNNAKISKILGEKWRCLSASEQQPYYERADQLRLHHRYTYPFYKYKPRARFLPRSSKSSSDNVGSRPDHTACAAATAASGAESEEQLSVSQVPSSFERRRTELCEGANVAAIDDGDATTDQYSPFIEDAGSELQNSMESSTPCTWPMDSQSHQQDQLEYVGDFSLSGLDFETVSFDTLSPQYAGDPELSETGCDFSGKQPISLHIEPYARDGIVEEDYCAFGSPLGLASNSETKDRFVPVASTSASIAFSSSDQRGAACDDEAEFQLDGASTMDKEAFVDDHECDLSHRPSLSDESADRDSSHCYFKDDPRYIAAGTDRL* # PASA_UPDATE: g6079.t1, single gene model update, valid-1, status:[pasa:asmbl_2157,status:3], valid-1 NODE_1616_length_10173_cov_42.3847 . gene 4809 9900 . - . ID=g6079;Name=g6079.t1 NODE_1616_length_10173_cov_42.3847 . mRNA 4809 9900 . - . ID=g6079.t1;Parent=g6079;Name=g6079.t1 NODE_1616_length_10173_cov_42.3847 . five_prime_UTR 9792 9900 . - . ID=g6079.t1.utr5p1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 9459 9900 . - . ID=g6079.t1.exon1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 9459 9791 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 9144 9308 . - . ID=g6079.t1.exon2;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 9144 9308 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 8726 8827 . - . ID=g6079.t1.exon3;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 8726 8827 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 8440 8572 . - . ID=g6079.t1.exon4;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 8440 8572 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 8122 8162 . - . ID=g6079.t1.exon5;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 8122 8162 . - 2 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 7732 7841 . - . ID=g6079.t1.exon6;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 7732 7841 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 7335 7453 . - . ID=g6079.t1.exon7;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 7335 7453 . - 1 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 6719 7141 . - . ID=g6079.t1.exon8;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 6719 7141 . - 2 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 6355 6408 . - . ID=g6079.t1.exon9;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 6355 6408 . - 2 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 5952 6127 . - . ID=g6079.t1.exon10;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 5952 6127 . - 2 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 5484 5622 . - . ID=g6079.t1.exon11;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 5484 5622 . - 0 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . exon 4809 5325 . - . ID=g6079.t1.exon12;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . CDS 4982 5325 . - 2 ID=cds.g6079.t1;Parent=g6079.t1 NODE_1616_length_10173_cov_42.3847 . three_prime_UTR 4809 4981 . - . ID=g6079.t1.utr3p1;Parent=g6079.t1 #PROT g6079.t1 g6079 MEHDPSVRVVSTEMSVLQPPRDGEERKLSYREAISGSPSSGLAPSGGAGGDTQSEKDLPVTISFSDLDYSVERPVRQLSLYEKLSGFSLSGFPKPEMTEKYLLRGVTGTIKPGTMTALMGPSGAGKSTLLDVIAGRKTAGNIAGELLFNGQPFSKELKRIVGYVEQTDTLLGTLTVRELLTYTAELKLPAAMPMAIKEKRVQEVIDELGLHRCADSIIGSATIRGISGGQAKRVNIGIELITNPRVLFLDEPTTGLDAATSFEVMSVVRGIANRGRSVIATIHQPSTDVFNLFNRLLLLVAGEVVYLGEIKDSIPYFIDLGFNLPEGMNPAEFLITVTGDPTSSDGVKTIEGPDVPKGYFAAQYRKSNLAQDRLQSAAASKASAAAASKIGSEPVQFQNTARHNFGVLTRRFFMQKRRDLPFFMARFMKIFFLDFVLGTLFSNQGHSQAAVYNIVSIIMFTTMTFGFGSVGLVGTFVEQRPFFTRERNAATYQVSSWYFANLVTDLPYNVGQVLTWSICIYFAVGLRSGASAFFLWCMVVYIVMDVGLGMAQMFACLAADYESAMVMAFPVLLLSFVFSGFYVQKPLIPDYFIWAYYISFLSYGLNALALNQFSGPTSYTYSTNCQMCTELTGLVCPSGATLTVQNATNYCCTAALSLPQPWLNSELLAFWGFGSNSATSSFWLNVLALGIMWAFFKLAAYLALRFKKHGKR* # PASA_UPDATE: g6077.t1, single gene model update, valid-1, status:[pasa:asmbl_2156,status:12], valid-1 NODE_1616_length_10173_cov_42.3847 . gene 383 1100 . - . ID=g6077;Name=g6077.t1 NODE_1616_length_10173_cov_42.3847 . mRNA 383 1100 . - . ID=g6077.t1;Parent=g6077;Name=g6077.t1 NODE_1616_length_10173_cov_42.3847 . five_prime_UTR 1042 1100 . - . ID=g6077.t1.utr5p1;Parent=g6077.t1 NODE_1616_length_10173_cov_42.3847 . exon 679 1100 . - . ID=g6077.t1.exon1;Parent=g6077.t1 NODE_1616_length_10173_cov_42.3847 . CDS 679 1041 . - 0 ID=cds.g6077.t1;Parent=g6077.t1 NODE_1616_length_10173_cov_42.3847 . exon 383 430 . - . ID=g6077.t1.exon2;Parent=g6077.t1 NODE_1616_length_10173_cov_42.3847 . CDS 383 430 . - 0 ID=cds.g6077.t1;Parent=g6077.t1;3_prime_partial=true #PROT g6077.t1 g6077 MTFELTHAPEGLVAACASLDRLPQSVLAQTTANVMRFVTYKQSVAPSAHELARSAPAHYAADTTDVKVDDAQATINALAFLCREGVRNGIATASDFASFVKSTAGVGEATATVLATAYETGRSASSESLAQILQVGQ # PASA_UPDATE: g10115.t1, single gene model update, valid-1, status:[pasa:asmbl_5483,status:12], valid-1 NODE_304_length_27583_cov_38.3891 . gene 25523 26843 . - . ID=g10115;Name=g10115.t1 NODE_304_length_27583_cov_38.3891 . mRNA 25523 26843 . - . ID=g10115.t1;Parent=g10115;Name=g10115.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 26826 26843 . - . ID=g10115.t1.utr5p1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . exon 26760 26843 . - . ID=g10115.t1.exon1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . CDS 26760 26825 . - 0 ID=cds.g10115.t1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . exon 26471 26612 . - . ID=g10115.t1.exon2;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . CDS 26471 26612 . - 0 ID=cds.g10115.t1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . exon 26093 26179 . - . ID=g10115.t1.exon3;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . CDS 26093 26179 . - 2 ID=cds.g10115.t1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . exon 25523 25892 . - . ID=g10115.t1.exon4;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . CDS 25696 25892 . - 2 ID=cds.g10115.t1;Parent=g10115.t1 NODE_304_length_27583_cov_38.3891 . three_prime_UTR 25523 25695 . - . ID=g10115.t1.utr3p1;Parent=g10115.t1 #PROT g10115.t1 g10115 MFDFVWAPLAIYMLWQASYYLKTEHVDGKRLAMDDALKTSFKWLSATPSHPSYKIMSKFDRKHWNLVFMGVQLLYTLLTLLPAILFFKFYWAHTIFLATIWCVALWNGANYYVDYLQARARRRSQSAVASATTTSLQQTTSSVVANATPAAVASPTAPPAQSN* # PASA_UPDATE: g10113.t1, single gene model update, valid-1, status:[pasa:asmbl_5482,status:3], valid-1 NODE_304_length_27583_cov_38.3891 . gene 15607 18978 . - . ID=g10113;Name=g10113.t1 NODE_304_length_27583_cov_38.3891 . mRNA 15607 18978 . - . ID=g10113.t1;Parent=g10113;Name=g10113.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 18792 18978 . - . ID=g10113.t1.utr5p1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 18597 18978 . - . ID=g10113.t1.exon1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 18597 18791 . - 0 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 18001 18355 . - . ID=g10113.t1.exon2;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 18001 18355 . - 0 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 17577 17737 . - . ID=g10113.t1.exon3;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 17577 17737 . - 2 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 17047 17167 . - . ID=g10113.t1.exon4;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 17047 17167 . - 0 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 16502 16623 . - . ID=g10113.t1.exon5;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 16502 16623 . - 2 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 16186 16267 . - . ID=g10113.t1.exon6;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 16186 16267 . - 0 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . exon 15607 16027 . - . ID=g10113.t1.exon7;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . CDS 15855 16027 . - 2 ID=cds.g10113.t1;Parent=g10113.t1 NODE_304_length_27583_cov_38.3891 . three_prime_UTR 15607 15854 . - . ID=g10113.t1.utr3p1;Parent=g10113.t1 #PROT g10113.t1 g10113 MASSDEERELQEYLGKHNVQALLKDILVHVCVDKPGNPLEYIRAYLNSLHSKSGYGSAYAATSHQERHVSFGTGKDEVIEQEEEHEEEAEEEEAEPEPRDSVSHPPPEAIRRRGAVSASVMTEEEATTYVKKVIPKDYKTMAALQKAMVKNILFSHLDDDERSEMFDAMDLVKFNAEDVIIQQGDEGDNFYVIDVGEVTVWVSSSGSEPRHVLTIGEGGSFGELALIYGTPRAATIKAKSDVRLWAIDRDSYRRILMGNTLRKRKMYEGFLEKVPILQSLDKWERLTVADALEPAVFENGDEVVRQGDEGNDFYIIVEGRATVTQKKSPADPPVVVGKLAPSDYFGEIALLTNRPRAATIVADGTLRTVKLDRGRFERVLGPVETILRRNISAYNSYIQLAV* # ORIGINAL: g10107.t1 original gene structure, not modified by PASA NODE_304_length_27583_cov_38.3891 AUGUSTUS gene 3752 4657 . + . ID=g10107;Name=g10107.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS mRNA 3752 4657 . + . ID=g10107.t1;Parent=g10107;Name=g10107.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 3752 4657 . + . ID=g10107.t1.exon1;Parent=g10107.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 3752 4657 . + 0 ID=cds.g10107.t1;Parent=g10107.t1 #PROT g10107.t1 g10107 MPIVSLPNRPSDDIALYEAALTRIEDIILTLSTESLRASEQPPPPLPRAPNDAPHPAAAADALRLHNPYAHLDITNGPDDSEGESDGDSNGNEPSSESDDGGDGHRRGTPHGRLSEAARRRLLIRCDIVKVDILVSIARLIAGSWKHTGGSTHSAQRVRLHSEEAAAICKSLIVRIDEQIAILLNEQGERRAEESEWHLLILNVSLTAEGAIASVDVLVRAIRRQINKLERFLKPMWDDRDSTKNRIGHNKWKSNPTPKNDYAERRRDAEGELRELQPAYSAITEDVLPSLESLRNAKHRI* # ORIGINAL: g10108.t1 original gene structure, not modified by PASA NODE_304_length_27583_cov_38.3891 AUGUSTUS gene 5638 6266 . + . ID=g10108;Name=g10108.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS mRNA 5638 6266 . + . ID=g10108.t1;Parent=g10108;Name=g10108.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 5638 5834 . + . ID=g10108.t1.exon1;Parent=g10108.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 5638 5834 . + 0 ID=cds.g10108.t1;Parent=g10108.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 5936 6266 . + . ID=g10108.t1.exon2;Parent=g10108.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 5936 6266 . + 1 ID=cds.g10108.t1;Parent=g10108.t1 #PROT g10108.t1 g10108 MSIMFLSLPIEIVVYHIAPLLSKSDRASLAGVNSRLGCVLKHVRLYTLRRVFATKYWESAEFRAVVGVSALAGVHKPNLSGCTGVTDVSALGGVHKLNLTECIAVTDVSALGGVYKLNLTGCTGVTDASALGGVYKLNLTKCIAVTDVTALGGVYELNLYGCKGVTDTSALGGVY* # PASA_UPDATE: g10111.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5481,status:3], valid-1 # PASA_UPDATE: g10111.t1, single gene model update, valid-1, status:[pasa:asmbl_5480,status:3], valid-1 NODE_304_length_27583_cov_38.3891 . gene 11612 13438 . - . ID=g10111;Name=g10111.t1 NODE_304_length_27583_cov_38.3891 . mRNA 11612 13438 . - . ID=g10111.t1.1.5b6be70b;Parent=g10111;Name=g10111.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 13414 13438 . - . ID=g10111.t1.1.5b6be70b.utr5p1;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . five_prime_UTR 13081 13118 . - . ID=g10111.t1.1.5b6be70b.utr5p2;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . exon 13414 13438 . - . ID=g10111.t1.1.5b6be70b.exon1;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . exon 13015 13118 . - . ID=g10111.t1.1.5b6be70b.exon2;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . CDS 13015 13080 . - 0 ID=cds.g10111.t1.1.5b6be70b;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . exon 12803 12869 . - . ID=g10111.t1.1.5b6be70b.exon3;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . CDS 12803 12869 . - 0 ID=cds.g10111.t1.1.5b6be70b;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . exon 11985 12586 . - . ID=g10111.t1.1.5b6be70b.exon4;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . CDS 11985 12586 . - 2 ID=cds.g10111.t1.1.5b6be70b;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . exon 11612 11820 . - . ID=g10111.t1.1.5b6be70b.exon5;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . CDS 11737 11820 . - 0 ID=cds.g10111.t1.1.5b6be70b;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . three_prime_UTR 11612 11736 . - . ID=g10111.t1.1.5b6be70b.utr3p1;Parent=g10111.t1.1.5b6be70b NODE_304_length_27583_cov_38.3891 . mRNA 11612 13438 . - . ID=g10111.t1;Parent=g10111;Name=g10111.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 13370 13438 . - . ID=g10111.t1.utr5p1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 13081 13118 . - . ID=g10111.t1.utr5p2;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . exon 13370 13438 . - . ID=g10111.t1.exon1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . exon 13015 13118 . - . ID=g10111.t1.exon2;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . CDS 13015 13080 . - 0 ID=cds.g10111.t1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . exon 12803 12869 . - . ID=g10111.t1.exon3;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . CDS 12803 12869 . - 0 ID=cds.g10111.t1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . exon 11985 12586 . - . ID=g10111.t1.exon4;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . CDS 11985 12586 . - 2 ID=cds.g10111.t1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . exon 11612 11820 . - . ID=g10111.t1.exon5;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . CDS 11737 11820 . - 0 ID=cds.g10111.t1;Parent=g10111.t1 NODE_304_length_27583_cov_38.3891 . three_prime_UTR 11612 11736 . - . ID=g10111.t1.utr3p1;Parent=g10111.t1 #PROT g10111.t1.1.5b6be70b g10111 MSGGHSILAPTEDDIQKLLAAQVHIGTKNADFQMEQYVYKRRLDGVHLLNLHKTWEKLVLAARIIVAIENPADICCISARPYGQRAVLKFAGHTGANAIAGRFTPGTFTNQIQAAFKEPRLLILTDPRTDHQPIREASYVNIPTIAFCDSDSPLRYVDVAIPCNNKNVNSIGLMWWLLAREVLRLRGTIARNQPWEVMPDLYFYRDPEEAEKEEAAAKPAAFEGDSFGAPAAQWDGAAPAEGAAEATGEWGATAEPGTWDAAAAQTWDQAAA* #PROT g10111.t1 g10111 MSGGHSILAPTEDDIQKLLAAQVHIGTKNADFQMEQYVYKRRLDGVHLLNLHKTWEKLVLAARIIVAIENPADICCISARPYGQRAVLKFAGHTGANAIAGRFTPGTFTNQIQAAFKEPRLLILTDPRTDHQPIREASYVNIPTIAFCDSDSPLRYVDVAIPCNNKNVNSIGLMWWLLAREVLRLRGTIARNQPWEVMPDLYFYRDPEEAEKEEAAAKPAAFEGDSFGAPAAQWDGAAPAEGAAEATGEWGATAEPGTWDAAAAQTWDQAAA* # ORIGINAL: g10112.t1 original gene structure, not modified by PASA NODE_304_length_27583_cov_38.3891 AUGUSTUS gene 13872 14832 . + . ID=g10112;Name=g10112.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS mRNA 13872 14832 . + . ID=g10112.t1;Parent=g10112;Name=g10112.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 13872 14088 . + . ID=g10112.t1.exon1;Parent=g10112.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 13872 14088 . + 0 ID=cds.g10112.t1;Parent=g10112.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 14708 14832 . + . ID=g10112.t1.exon2;Parent=g10112.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 14708 14832 . + 2 ID=cds.g10112.t1;Parent=g10112.t1 #PROT g10112.t1 g10112 MSSQIDFSKALERFLSEYKTRTPQLLKLIDAYLVYVLLTGIFQFVYCCLVGTFPFNSFLSGFISTVGTFVLTACLRIQTNPANEFKGISVERAFADYLFCNIVLHLVVMNFLG* # ORIGINAL: g10109.t1 original gene structure, not modified by PASA NODE_304_length_27583_cov_38.3891 AUGUSTUS gene 7331 8599 . - . ID=g10109;Name=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS mRNA 7331 8599 . - . ID=g10109.t1;Parent=g10109;Name=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 8435 8599 . - . ID=g10109.t1.exon1;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 8435 8599 . - 0 ID=cds.g10109.t1;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 7827 7908 . - . ID=g10109.t1.exon2;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 7827 7908 . - 0 ID=cds.g10109.t1;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 7612 7652 . - . ID=g10109.t1.exon3;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 7612 7652 . - 2 ID=cds.g10109.t1;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 7331 7399 . - . ID=g10109.t1.exon4;Parent=g10109.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 7331 7399 . - 0 ID=cds.g10109.t1;Parent=g10109.t1 #PROT g10109.t1 g10109 MASVALRSVRLVLARPAMCVRFASDVAHRGASSPAPVERERKDIREARFIDRVKEVNAHPAIDMINAIPPKKVHSRVIACDGGGGALGHPKIYINLDQPGPKACGYCGLRFEKDDHHH* # PASA_UPDATE: g10110.t1, single gene model update, valid-1, status:[pasa:asmbl_5478,status:3], valid-1 NODE_304_length_27583_cov_38.3891 . gene 8908 11498 . + . ID=g10110;Name=g10110.t1 NODE_304_length_27583_cov_38.3891 . mRNA 8908 11498 . + . ID=g10110.t1;Parent=g10110;Name=g10110.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 8908 8957 . + . ID=g10110.t1.utr5p1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 8908 9106 . + . ID=g10110.t1.exon1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 8958 9106 . + 0 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 9290 9389 . + . ID=g10110.t1.exon2;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 9290 9389 . + 1 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 9576 9609 . + . ID=g10110.t1.exon3;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 9576 9609 . + 0 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 9796 9872 . + . ID=g10110.t1.exon4;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 9796 9872 . + 2 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 10069 10094 . + . ID=g10110.t1.exon5;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 10069 10094 . + 0 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 10336 10431 . + . ID=g10110.t1.exon6;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 10336 10431 . + 1 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 10752 10820 . + . ID=g10110.t1.exon7;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 10752 10820 . + 1 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 10977 11091 . + . ID=g10110.t1.exon8;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 10977 11091 . + 1 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . exon 11276 11498 . + . ID=g10110.t1.exon9;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . CDS 11276 11380 . + 0 ID=cds.g10110.t1;Parent=g10110.t1 NODE_304_length_27583_cov_38.3891 . three_prime_UTR 11381 11498 . + . ID=g10110.t1.utr3p1;Parent=g10110.t1 #PROT g10110.t1 g10110 MASKGEKGVAGRAGSGRPGADKYSVLLPTYNERENLPLMVWLLAKAFEEGGYDWEVVVVDDNSPDGTQQVAEQLVKIYGSDHIVLRPRAGKLGLGSAYIHGMKHASGNFVFIMDADLSHHPKFIPEFIRKQKEKDYDVVSGTRYEGSGGVYGWDLRRKLISRCANFVTQVLLRPGASDLTGSFRLYKKDVLRRMMDVCVSKAYVFQMEMIIRARQLNFTIGQVPITFVDRVYGESKLGGNEIVSFAKGLLTLFLTT* # PASA_UPDATE: g10106.t1, single gene model update, valid-1, status:[pasa:asmbl_5474,status:12],[pasa:asmbl_5477,status:12], valid-1 NODE_304_length_27583_cov_38.3891 . gene 149 3264 . + . ID=g10106;Name=g10106.t1 NODE_304_length_27583_cov_38.3891 . mRNA 149 3264 . + . ID=g10106.t1;Parent=g10106;Name=g10106.t1 NODE_304_length_27583_cov_38.3891 . five_prime_UTR 149 149 . + . ID=g10106.t1.utr5p1;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . exon 149 255 . + . ID=g10106.t1.exon1;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . CDS 150 255 . + 0 ID=cds.g10106.t1;Parent=g10106.t1;5_prime_partial=true NODE_304_length_27583_cov_38.3891 . exon 656 781 . + . ID=g10106.t1.exon2;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . CDS 656 781 . + 2 ID=cds.g10106.t1;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . exon 1109 1236 . + . ID=g10106.t1.exon3;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . CDS 1109 1236 . + 2 ID=cds.g10106.t1;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . exon 1435 3264 . + . ID=g10106.t1.exon4;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . CDS 1435 3087 . + 0 ID=cds.g10106.t1;Parent=g10106.t1 NODE_304_length_27583_cov_38.3891 . three_prime_UTR 3088 3264 . + . ID=g10106.t1.utr3p1;Parent=g10106.t1 #PROT g10106.t1 g10106 LFIMCLTVALLAALAVTIVAFYLFIRHFVDSDARGAYDFFGSTGSDDAFAAVAGVTAFLALLAVYLVGQLFFFHMYLIHKKLTTYDYILLQRAKESNAAVVPAKPAVKEEATKEPQHRFKNKVHPDDTDLESGISEPRSEDDEESVRHPHDEMAATRGRAPSGSSMEQPNVSPHHHPATVLDESKSRRVSAVTADDSGQLPLPPPRRPTQPLPPLHNPRPASKRRSVPPAAESVYPEEQTQPQYVVHAMVRGPPDRVRQVTGQTGQSGIGTTQGGLLLPSDADDGSRNLQLVVVNGPNGVRTPSDGGDDYGYQQRQTRNGDPYYSSDAESVEAEPRDHHVRRQQPAQSRMRPEDMQLVPVRPPKHTPSPVDPRQAQHQRQSSRPIRRLVLPDGTTATVDHDAHGQERDAALPPPPPSRLARQPAQGGPADDHSSAGVRGSYQPQKPQQPQQQQQQQEQNLPEQEQPGNAQPLTVARAKRRSQKQQQRREMEEQFNAQLAVQAAARQQQMQQLDEFRQAQERHHLKQQKMADGDRAAAQQQQLPQSGPPPPRARKTLRDPAGAPARPGSVVSAAASHDEPPPSRLLQDDPTGLRNPSQDSIADGADMVPPAPPPPQPQRSSTPFVASQKVRGMPLGPLPPVPNKFASVVGGPRTPLEPIETVGALEEEGEY* # ORIGINAL: g10114.t1 original gene structure, not modified by PASA NODE_304_length_27583_cov_38.3891 AUGUSTUS gene 19706 25221 . + . ID=g10114;Name=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS mRNA 19706 25221 . + . ID=g10114.t1;Parent=g10114;Name=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 19706 19864 . + . ID=g10114.t1.exon1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 19706 19864 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 20092 20184 . + . ID=g10114.t1.exon2;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 20092 20184 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 20441 20602 . + . ID=g10114.t1.exon3;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 20441 20602 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 21063 21218 . + . ID=g10114.t1.exon4;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 21063 21218 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 21377 21468 . + . ID=g10114.t1.exon5;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 21377 21468 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 21725 21806 . + . ID=g10114.t1.exon6;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 21725 21806 . + 1 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 21969 22102 . + . ID=g10114.t1.exon7;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 21969 22102 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 22470 22580 . + . ID=g10114.t1.exon8;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 22470 22580 . + 1 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 22945 23324 . + . ID=g10114.t1.exon9;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 22945 23324 . + 1 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 23658 23809 . + . ID=g10114.t1.exon10;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 23658 23809 . + 2 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 24058 24192 . + . ID=g10114.t1.exon11;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 24058 24192 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 24517 24631 . + . ID=g10114.t1.exon12;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 24517 24631 . + 0 ID=cds.g10114.t1;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS exon 24740 25221 . + . ID=g10114.t1.exon13;Parent=g10114.t1 NODE_304_length_27583_cov_38.3891 AUGUSTUS CDS 24740 25221 . + 2 ID=cds.g10114.t1;Parent=g10114.t1 #PROT g10114.t1 g10114 MSLIGLSGYAAVSTAAFAVACAATVETETPPSLSHGYASDVLADLFQYPASVAAAVNMGLCLLLLFAKAVQLFIFGPLRAIEAQHFKDRLLNYVLFKIVFVGAILDTNLVELVVWGAWFAIMGFLKMFTLLARDRFEYLTFSPTTTVATHARVFSLLLCILASDVLWFSFCVYVFYGTAGLSIVLLLSYECLAVFLDTVQTIVKYGIHLRDVSRNGVWESRGTYVYYTEFITETLSLVATLAHYFHILYLHDDMFSLVMAILFLNIQSVWRNLRNKIGSYKNYRRAISTLDSHLTNATQGELDEYDDDCAICRERMGSAKKLPCGHLFHLSCLRSWLEQNSSCPTCRRPLVEYSPPSSGSTSVGVDANGQAVNGAVPGNLAGNIGDRVPEDAQRHLAAALEALNPAEAMRRASAATNNNNTVNDGAAAGGVGGAGGGPAAVIAGRPHAHHSVFQFDGPRWFRWLPFFSIEVVRRGGNAGRAARQNANINTTAIANDANARLGLMDQLVLQVLEVFPHFPPELIAADLAATNSVEDTMENILEGRVVAPAVDGTPPENDDRANSPSAREHVISLPPPAPAPDAGVWSGGANADYAPSAAPASHRVLTPHAHAMPIDAVDATGNILSSRESTAPPAPTRTLAYDASSYTGAALASPSLSRTSSAIGSSIEQPGRHMDASSTTPNPTATPTATTAAGVQVSHSQSAMGIEPGLPGDSEALSPAQDTPEVRRQKALAAAQRRMAMMQSPHAQSP* # PASA_UPDATE: g12151.t1, single gene model update, valid-1, status:[pasa:asmbl_5951,status:12], valid-1 NODE_3375_length_3600_cov_39.3733 . gene 118 3575 . + . ID=g12151;Name=g12151.t1 NODE_3375_length_3600_cov_39.3733 . mRNA 118 3575 . + . ID=g12151.t1;Parent=g12151;Name=g12151.t1 NODE_3375_length_3600_cov_39.3733 . five_prime_UTR 118 146 . + . ID=g12151.t1.utr5p1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . exon 118 446 . + . ID=g12151.t1.exon1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . CDS 147 446 . + 0 ID=cds.g12151.t1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . exon 993 1142 . + . ID=g12151.t1.exon2;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . CDS 993 1142 . + 0 ID=cds.g12151.t1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . exon 1550 1829 . + . ID=g12151.t1.exon3;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . CDS 1550 1829 . + 0 ID=cds.g12151.t1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . exon 2115 3575 . + . ID=g12151.t1.exon4;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . CDS 2115 3403 . + 2 ID=cds.g12151.t1;Parent=g12151.t1 NODE_3375_length_3600_cov_39.3733 . three_prime_UTR 3404 3575 . + . ID=g12151.t1.utr3p1;Parent=g12151.t1 #PROT g12151.t1 g12151 MVRVWHSVAVAASLSVLLSLVALQAHGFPQAEISAGDTADDQAENEAPPLTLFTVKGEFAEALKAVGLSLETLDVSASTVSQAREVTAEPADGTYLDVQLTFDGVETSLPITFTLAKVYPSPKNGFVYRQSNTVKGLLGRADDGFLELGKDHKNDDFKVTFSSRVAPKSGNYRHVFAVGFEMKSNANAGQERIEAYSITGRLIGRYRLPQHAQNNREGGLFVGIISTDAIGQVVFDEDESVQEAAAVKSFYFGVRESDVMDGLSNRERALFWLAFNVFVALMLSLDLCYMRARSFHFRDALKWSAVWVAMALVFDFGLYSVRGRTPAMLWLTSYLLEKFLSVDNLFVFLSIFQSFRTPLRFQHKVLTWGILGAIVLRALFIYAGVMLVAQFSWIVVLFGAFLVYTGVKMLMQKDDHETSLDGPDADADIAASIIHDVEAPMGGVGVLSSSSSSSSQQATINMAGTESNFILRHIQRVMPMTHEYDASGSFFVREGYAPLPPAGTASSSGSMQRNGSNAGLSRMMSSDLGAHVGSSSASSAGGSRRGLCSSSLGGWIATPLFLVLIVIETTDMVFAVDSIPAVLSITTDPFIAYTSNIFAILGLRALYFCLATMLDMFHYLKHALSVILMFVGAKMLLVPVGVHIPVDWALGIVVTILGASIALSIAKQRRKI* # PASA_UPDATE: g6045.t1, single gene model update, valid-1, status:[pasa:asmbl_8718,status:12], valid-1 NODE_656_length_19454_cov_40.9462 . gene 7640 9085 . - . ID=g6045;Name=g6045.t1 NODE_656_length_19454_cov_40.9462 . mRNA 7640 9085 . - . ID=g6045.t1;Parent=g6045;Name=g6045.t1 NODE_656_length_19454_cov_40.9462 . five_prime_UTR 9018 9085 . - . ID=g6045.t1.utr5p1;Parent=g6045.t1 NODE_656_length_19454_cov_40.9462 . exon 8763 9085 . - . ID=g6045.t1.exon1;Parent=g6045.t1 NODE_656_length_19454_cov_40.9462 . CDS 8763 9017 . - 0 ID=cds.g6045.t1;Parent=g6045.t1 NODE_656_length_19454_cov_40.9462 . exon 7640 8543 . - . ID=g6045.t1.exon2;Parent=g6045.t1 NODE_656_length_19454_cov_40.9462 . CDS 8004 8543 . - 0 ID=cds.g6045.t1;Parent=g6045.t1 NODE_656_length_19454_cov_40.9462 . three_prime_UTR 7640 8003 . - . ID=g6045.t1.utr3p1;Parent=g6045.t1 #PROT g6045.t1 g6045 MLDKCAKLIDRLELHLARRPDGDGVGESANKQSTKTRTVASDSDCEIDGDAADADIGAANRRPNARTAARLVAECKKEIDTIDGKHGSIPAVAEFVKTSRARLAACEHSTMAVSQAHDIDLLVRKAERQLRAVERATRGGKRDAALAAHAELVDGGVLEALMMHKNASSVSIFLAKALPTLDDFDRNFEATVSEKEASRARRSQAIRSEMQSLQREVMSLSSKIEAATDGRLQRAKKEADAQIARVQQGELAAATATKQKDTTR* # PASA_UPDATE: g6046.t1, single gene model update, valid-1, status:[pasa:asmbl_8720,status:3], valid-1 NODE_656_length_19454_cov_40.9462 . gene 9523 12881 . + . ID=g6046;Name=g6046.t1 NODE_656_length_19454_cov_40.9462 . mRNA 9523 12881 . + . ID=g6046.t1;Parent=g6046;Name=g6046.t1 NODE_656_length_19454_cov_40.9462 . five_prime_UTR 9523 9795 . + . ID=g6046.t1.utr5p1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . exon 9523 9851 . + . ID=g6046.t1.exon1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . CDS 9796 9851 . + 0 ID=cds.g6046.t1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . exon 11266 11374 . + . ID=g6046.t1.exon2;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . CDS 11266 11374 . + 1 ID=cds.g6046.t1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . exon 11855 11967 . + . ID=g6046.t1.exon3;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . CDS 11855 11967 . + 0 ID=cds.g6046.t1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . exon 12195 12352 . + . ID=g6046.t1.exon4;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . CDS 12195 12352 . + 1 ID=cds.g6046.t1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . exon 12492 12881 . + . ID=g6046.t1.exon5;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . CDS 12492 12847 . + 2 ID=cds.g6046.t1;Parent=g6046.t1 NODE_656_length_19454_cov_40.9462 . three_prime_UTR 12848 12881 . + . ID=g6046.t1.utr3p1;Parent=g6046.t1 #PROT g6046.t1 g6046 MNLAISMSMEYWRGNLASRELEREGLGFSLDAIVTVIDAINFKGYEDSSYTAKLQAQYTDLIVINKHEAVGERALDDVIDRINDLNTDTPRIKSNNGVVDPALIMGIDTKLFSLTSLSGARDGGANVTHNDHHSREVDVLCVESRVPITKEAMQQLLSTLPIDELYRAKGTFLNISDGRTVLCDHAFGRSTFHDIITESVMQDRIGNNDNNSLSSNPTGPNVVTGGTRVSFVFMGVGLRRHLPRLRAALSVEEGDLFKFSERP* # ORIGINAL: g6043.t1 original gene structure, not modified by PASA NODE_656_length_19454_cov_40.9462 AUGUSTUS gene 239 1140 . - . ID=g6043;Name=g6043.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS mRNA 239 1140 . - . ID=g6043.t1;Parent=g6043;Name=g6043.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 1003 1140 . - . ID=g6043.t1.exon1;Parent=g6043.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 1003 1140 . - 0 ID=cds.g6043.t1;Parent=g6043.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 239 378 . - . ID=g6043.t1.exon2;Parent=g6043.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 239 378 . - 0 ID=cds.g6043.t1;Parent=g6043.t1 #PROT g6043.t1 g6043 MEAVTKVFKRGDSTSSPTQKRKEKEMAKVQSAQSSCDDLLAPPESKPEQLSGWLHKQGDKGLVKMWKNRWFAFDDQSGLLLYFKGPDDVQPQ # PASA_UPDATE: g6049.t1, single gene model update, valid-1, status:[pasa:asmbl_8719,status:12], valid-1 NODE_656_length_19454_cov_40.9462 . gene 17458 19375 . - . ID=g6049;Name=g6049.t1 NODE_656_length_19454_cov_40.9462 . mRNA 17458 19375 . - . ID=g6049.t1;Parent=g6049;Name=g6049.t1 NODE_656_length_19454_cov_40.9462 . exon 19222 19375 . - . ID=g6049.t1.exon1;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . CDS 19222 19375 . - 0 ID=cds.g6049.t1;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . exon 18788 18957 . - . ID=g6049.t1.exon2;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . CDS 18788 18957 . - 2 ID=cds.g6049.t1;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . exon 18363 18416 . - . ID=g6049.t1.exon3;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . CDS 18363 18416 . - 0 ID=cds.g6049.t1;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . exon 17458 17930 . - . ID=g6049.t1.exon4;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . CDS 17724 17930 . - 0 ID=cds.g6049.t1;Parent=g6049.t1 NODE_656_length_19454_cov_40.9462 . three_prime_UTR 17458 17723 . - . ID=g6049.t1.utr3p1;Parent=g6049.t1 #PROT g6049.t1 g6049 MPVDFVEGFTIPDTDTRESLRGEQGLRVAMKKYIPAFSVLGVYAGRLHLEGESTDLRPHVSCQHEAYNFEMTVPLEDPKVILIDGYGYGNLLMLANDYREDPFSVPLSGKRQDAGAEEKVNAHFVNVTYRGWPFIIMCTGQNGNKKGLSAEEEIIVDYTDNYWSSMRQAIASADQYRSEIEDWIRTIDSIREAR* # ORIGINAL: g6048.t1 original gene structure, not modified by PASA NODE_656_length_19454_cov_40.9462 AUGUSTUS gene 14941 16120 . - . ID=g6048;Name=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS mRNA 14941 16120 . - . ID=g6048.t1;Parent=g6048;Name=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 15953 16120 . - . ID=g6048.t1.exon1;Parent=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 15953 16120 . - 0 ID=cds.g6048.t1;Parent=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 15611 15726 . - . ID=g6048.t1.exon2;Parent=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 15611 15726 . - 0 ID=cds.g6048.t1;Parent=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 14941 15100 . - . ID=g6048.t1.exon3;Parent=g6048.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 14941 15100 . - 1 ID=cds.g6048.t1;Parent=g6048.t1 #PROT g6048.t1 g6048 MAPRILILTGDFVEDLEIRSPFDCLAMVGAHVDVVAPKKKKGDIIRTCIHDFEGDDTYTEKRGHNFELNASIDDVDVTQYDGLVVPGGRAPEYIRFEVTAAGATYKDVPMDGVHVDGNIITAPAWPANGPWIGAFLNALGTSFVHSK* # ORIGINAL: g6044.t1 original gene structure, not modified by PASA NODE_656_length_19454_cov_40.9462 AUGUSTUS gene 1892 7182 . - . ID=g6044;Name=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS mRNA 1892 7182 . - . ID=g6044.t1;Parent=g6044;Name=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 7053 7182 . - . ID=g6044.t1.exon1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 7053 7182 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 6594 6812 . - . ID=g6044.t1.exon2;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 6594 6812 . - 2 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 5729 6409 . - . ID=g6044.t1.exon3;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 5729 6409 . - 2 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 5272 5432 . - . ID=g6044.t1.exon4;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 5272 5432 . - 2 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 5009 5113 . - . ID=g6044.t1.exon5;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 5009 5113 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 4548 4652 . - . ID=g6044.t1.exon6;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 4548 4652 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 4199 4324 . - . ID=g6044.t1.exon7;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 4199 4324 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 3975 4038 . - . ID=g6044.t1.exon8;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 3975 4038 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 3510 3652 . - . ID=g6044.t1.exon9;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 3510 3652 . - 2 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 2680 3199 . - . ID=g6044.t1.exon10;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 2680 3199 . - 0 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 2242 2422 . - . ID=g6044.t1.exon11;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 2242 2422 . - 2 ID=cds.g6044.t1;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 1892 2042 . - . ID=g6044.t1.exon12;Parent=g6044.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 1892 2042 . - 1 ID=cds.g6044.t1;Parent=g6044.t1 #PROT g6044.t1 g6044 MSDADVAAMALLVRGVSDAFNEARMRPMADDKENAGHPTNAAYDPRKEKLSAWREQRKMEAAHIERSKPKAFIPGGVAEVRKPTVGSDNSKRRPPIRSMLSRQSMYDSALFSRPDTAMSVRSVATEKHTKDSKKATPAQQPSTKHKPNPFVAPRSTTATSSTSEEMPSDAVCAVTQASELVSMDGVACTYASLLDAVGVEGACDADSSDASTQQKQGSQTESKESDGKGGKSDGTHGDKVESSPSPTSQQTVSASSGAAIANDGTVVCDVTNDDAIDEECTTHDVPTGASSGVLASSSGTSGAEKDGHFWRTVMEGEKVRLDVLCAKWDAVLQGDKSADIPEDVAGQIRATIGQAQLLVRKRFTQYGELCDHSVNKTGELETRATDLEGFWDVIKYQIDNVYSRFEHLAELEARNWSDVIAPRPSSAASKETKKKAAPKASTASVTNKTASAEAARQRLAAVKAAMKQRSAVSLPEGDSSVPAADIMRSPSAGANQMRTSPAFAKKSGKPLLPSSVAVLTPVRATRKERNELGSDVVLTPVRRSTRATPSRYRASGALDEMPMEALLEQTDYAFTPNKALAHTDIMTIKPSTMTRSTKKAAIASPTPAYTTPSPTRTTPTQKATPSSRPSVSRSPAVSTPSATKSRAQNSSPVCRNNTPTQSGSTMTQVGCPAAVAIPKEGVPAELAAAAALILGTDAPDVLQADAFGKYLCADISADANFADCDVNGHVDEAGVTDSIAVAPSPSVAKLTVTPSRGKLHFRIVRKEPTDSASGTPTRADVTAAAACAQKTISNTPSSVKKYAVYTPNKRVRELLGTDVVVSPVRRSGRLSIAHDTSATIASTDELPADLEYGYVPNPSLL* # ORIGINAL: g6047.t1 original gene structure, not modified by PASA NODE_656_length_19454_cov_40.9462 AUGUSTUS gene 13330 14535 . - . ID=g6047;Name=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS mRNA 13330 14535 . - . ID=g6047.t1;Parent=g6047;Name=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 14419 14535 . - . ID=g6047.t1.exon1;Parent=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 14419 14535 . - 0 ID=cds.g6047.t1;Parent=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 13919 14037 . - . ID=g6047.t1.exon2;Parent=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 13919 14037 . - 0 ID=cds.g6047.t1;Parent=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS exon 13330 13684 . - . ID=g6047.t1.exon3;Parent=g6047.t1 NODE_656_length_19454_cov_40.9462 AUGUSTUS CDS 13330 13684 . - 1 ID=cds.g6047.t1;Parent=g6047.t1 #PROT g6047.t1 g6047 MEQSIAECGREIDTTLPDVLPTDEIASMLEARGVSISMNASKDELLTLYGRYIMPRPQRERKRRCRVPCGRVESPSKKRHYPTDGDPEDPADHRGDYDFPFKRHASDKSVGRHMNSFMDRGSTENEPEGGGDCRLYHTGMGINAYGTFVMSAARCDDSDRRSDASNVSAIGDLRIDADYGEEEAFESMEGVVGMDE* # ORIGINAL: g3420.t1 original gene structure, not modified by PASA NODE_1081_length_14099_cov_40.5601 AUGUSTUS gene 6807 9769 . + . ID=g3420;Name=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS mRNA 6807 9769 . + . ID=g3420.t1;Parent=g3420;Name=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 6807 7156 . + . ID=g3420.t1.exon1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 6807 7156 . + 0 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 7257 7373 . + . ID=g3420.t1.exon2;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 7257 7373 . + 1 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 7574 8081 . + . ID=g3420.t1.exon3;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 7574 8081 . + 1 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 8365 8482 . + . ID=g3420.t1.exon4;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 8365 8482 . + 0 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 8657 8999 . + . ID=g3420.t1.exon5;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 8657 8999 . + 2 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 9188 9279 . + . ID=g3420.t1.exon6;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 9188 9279 . + 1 ID=cds.g3420.t1;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 9405 9769 . + . ID=g3420.t1.exon7;Parent=g3420.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 9405 9769 . + 2 ID=cds.g3420.t1;Parent=g3420.t1 #PROT g3420.t1 g3420 MTPPAPTQQSPTAAAQLTAQTASANSICDALVIGSGPHALALLCRMIEGTPDALSDTEHALYCYWAGNDASTASRSALVRKHVRVIDPSEQWGSWRAAFANLNITHLRSPHFFHIDPFDVDALQQYAESSGRADELISADGLFSRKRDKRRACVSRNATGLGSHFTPRDRQRFRMPSTRLFADFCDSRIEKYGLSGIVEHGRAVDIRSEPSAETIAGTGQLFRVNLDDGRYVLARRVVVAIGSGGTRLPTWIKPEKTHFSDCAFSVPCRSVKHSLDIMRTGELQEAVKAGLAAGARGKHLVIVGGGLTAAQLTHVAIQRPCQFSKVTWLIRGSLKHKQFDVDVDWVGRYRNIQLANFWALPTMQDPFTHSHSERFEAVSSARGGGSVTPEIMATLRPATVDGRLVIRQRCEVVSAVCQTSRNNSVGMQHTVSPHAQENADEEDKWTLKVCNADGAQEGREGPHVSDTLSCDEIWLATGCELDISTEGIFQSLQKEFPVSSIYGLPVLTQDLRWREDCAVHVMGAYAALQLGPNAHNLSGAKSGSERIAEQLESLCCHGHNETTDGINPTTSIVELTTDEAALTRHGLHVRAKGQRSAVMADRLRSGNASLYSVLLEAHREPIDRDRSNIT* # PASA_UPDATE: g3421.t1, single gene model update, valid-1, status:[pasa:asmbl_313,status:12],[pasa:asmbl_314,status:12], valid-1 NODE_1081_length_14099_cov_40.5601 . gene 10017 13739 . + . ID=g3421;Name=g3421.t1 NODE_1081_length_14099_cov_40.5601 . mRNA 10017 13739 . + . ID=g3421.t1;Parent=g3421;Name=g3421.t1 NODE_1081_length_14099_cov_40.5601 . five_prime_UTR 10017 10138 . + . ID=g3421.t1.utr5p1;Parent=g3421.t1 NODE_1081_length_14099_cov_40.5601 . exon 10017 13739 . + . ID=g3421.t1.exon1;Parent=g3421.t1 NODE_1081_length_14099_cov_40.5601 . CDS 10139 13579 . + 0 ID=cds.g3421.t1;Parent=g3421.t1 NODE_1081_length_14099_cov_40.5601 . three_prime_UTR 13580 13739 . + . ID=g3421.t1.utr3p1;Parent=g3421.t1 #PROT g3421.t1 g3421 MGRHSGAAVLAFVVCVVAAVVVLSVEEAEAANPNYAEALQKSMFFYEAQRAGRKDAQSRVHWRGDSVVNDGSDLGFDLSGGWFDAGDHIKFGVPMGYSATVLAWGGLTFRDGYVKSGQMQYLKSNLRFVAEYFLQAHSKGKFVLAGQVGVADYDHQSWVSPEVIHYAAAKTRPSQMITKNCPGSELAGEASAALASISLLLREDNATYADILLRHATELHEFADTYRGVYTACITAAAGYYDSYSGYLDELAWAGAWMYRATNNRTYLDKARDAYNQSTGGASCPCQWTLSWDDVSYGAAVVLYELTNDTLYSVNIEKNLDFWSKTLRKSAGGLSFLNQWGSLRYATTTAFTAFAYARLIAKSKPAVATAYTAWAKVQVDYALGVNPANRSYVVGFGKNYPKNPHHRGATGGWANSVTCCPTTSRHILYGALVGGPKAADDFAYADLRNDWIANEVATDYNAGFSGALSALMETYGGTALANFPVRESYTPSDEFGVSMALNGQDVAQYLGLRIIVKQMTAWPARRVQLSLRYFMNLADVEAMALVANPLDALTLSIEYADGNGKAVVSKGWLPQQVNNRTVYYLEVAWPAENAPWPGGVGSTGSEYEAQVRISLTATKRSTLWNRKTDYSYGALTSSITATELVCLYSNGALVFGREPGGDASVAPRPTTIKSTTAVTALSSSPSPAPASTLPTTSSKQALSASSSKQASSATSSKQASSATSSKQALSAVTSSKVASSATLSKQASSVMTTSIPPTPNNSIAPQVDVSCMWEDNGQKQAIVVTARISNTGAVGIALNTSKVQYFFGGSAAATLYNASVVSALVVYPDDQVAPLPLPISSILATVVAYGYGSSMYAARIGFQSTVTLPVNARLVLCISVVPATPGAAMNRDSEYSRVSTATWGYVTCPSISVTVGATLAWGTLPVALSSVTSSLLSSNTQTSSSNKVQSSPTPSPTTLRPTMTARTPSAVMTSTAAAGASLLPVVSVRFEPVSSSEGSITFRVSVTNAGSSNIALPALAFAYYFDGRPTATVSASEYAGEIYSGSVTTTGPPYYVDITSSTSSYVNAAPGSQQRGARLALTVRFSSSSPVVVPPSGTVSVQASVHTTSWAALNKGSDYSGQTNVGPNDRIVVTLNNIIVSGIPPS* # ORIGINAL: g3419.t1 original gene structure, not modified by PASA NODE_1081_length_14099_cov_40.5601 AUGUSTUS gene 190 6242 . + . ID=g3419;Name=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS mRNA 190 6242 . + . ID=g3419.t1;Parent=g3419;Name=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 190 237 . + . ID=g3419.t1.exon1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 190 237 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 550 630 . + . ID=g3419.t1.exon2;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 550 630 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 858 890 . + . ID=g3419.t1.exon3;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 858 890 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 1073 2155 . + . ID=g3419.t1.exon4;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 1073 2155 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 2368 2486 . + . ID=g3419.t1.exon5;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 2368 2486 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 2821 2908 . + . ID=g3419.t1.exon6;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 2821 2908 . + 1 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 3296 3424 . + . ID=g3419.t1.exon7;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 3296 3424 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 3800 4003 . + . ID=g3419.t1.exon8;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 3800 4003 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 4375 4667 . + . ID=g3419.t1.exon9;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 4375 4667 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 4875 5024 . + . ID=g3419.t1.exon10;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 4875 5024 . + 1 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 5263 5409 . + . ID=g3419.t1.exon11;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 5263 5409 . + 1 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 5554 5680 . + . ID=g3419.t1.exon12;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 5554 5680 . + 1 ID=cds.g3419.t1;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS exon 5835 6242 . + . ID=g3419.t1.exon13;Parent=g3419.t1 NODE_1081_length_14099_cov_40.5601 AUGUSTUS CDS 5835 6242 . + 0 ID=cds.g3419.t1;Parent=g3419.t1 #PROT g3419.t1 g3419 HAASAVKEEDSGTDIDVPDAKKPSPKKSPAKTASRKSPAKTNTALKDESATDVSGDEEPAPKPPKPTPPSSTKAVPAPAATVTPVTPKAAPKFKPGGRMVVSAAQSAPTIASPVSVKTPPVVTSPQSQPKTDASAAAEKAKPAAAGGRSAYNLHLSRAPPQALGTKEVPEGAEMCLNGYTFVVTGVLESIDREGVDDLIKKHGGKVTGSISKKTDYVVMGRDAGPSKIAKAEELGTKVLDEDKLFSLVRESMPWGKEFATKGKAVLERVNKEKAERERAAQAPPADVTLSAAAPAATATPAAGAPVNPYKKANPYKKAPAVDAAQPSAPAPAASVVEGAPVQSGPSSHTGVETQLLVEKYRPQTIREITGNQSNVAKLVEWLRAWDENFASSGPAKAKAPSFGRGSKGIDVAQCKAALLSGPPGIGKTTAALAVCRELGFEPIEFNASDTRSKNGLRDSVSELLGSRSIGEFFKSDRAPSFAAKAKGHDAHNKPFKRHVLIMDECDGMGGGDRGGLVELVQLIKTTKVPVICICNDHANPKMRTLINYCMDLRFQRPQVASIRQRIVDIAQKEGIQIDGPTIEQIITATNSDIRQVLNLLSMWRINTKRFNYDDVKSRLNDARKDIPLGPFDAVRKLLSAQESDKLTLTDRIDLFFEDYDLIPLMMHENYLSVDPVRAHRESGGVKNKAEIRKLELMSETADSFCDGDIVSRAIRSGQNWSLLSTLAVFSAAVPSTLIRGSASWKIDFPQWLGMNSKSTKFNRIARDLQLHMRLSAQADLQGTALEYLPSLRTLLTGPLVHEGTAGVDQVIRLMDDYHLMREDWDALLELTQLEGMPDPTKSIESKVKAAFTREYNKRAHLEPYSMGAGTAKGKKGAAGATSSADLDLIGNEDSSAVVAANAATEELDENVDEDDVANDRNVKSAAKPKGASGRGRGGGGSASAASGGSQGGSASGGAGSRGRGKGRGR* # ORIGINAL: g512.t1 original gene structure, not modified by PASA NODE_1885_length_8736_cov_41.4924 AUGUSTUS gene 3971 8553 . + . ID=g512;Name=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS mRNA 3971 8553 . + . ID=g512.t1;Parent=g512;Name=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 3971 6769 . + . ID=g512.t1.exon1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 3971 6769 . + 0 ID=cds.g512.t1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 6960 7116 . + . ID=g512.t1.exon2;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 6960 7116 . + 0 ID=cds.g512.t1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 7381 7411 . + . ID=g512.t1.exon3;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 7381 7411 . + 2 ID=cds.g512.t1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 7635 7772 . + . ID=g512.t1.exon4;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 7635 7772 . + 1 ID=cds.g512.t1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 7961 8065 . + . ID=g512.t1.exon5;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 7961 8065 . + 1 ID=cds.g512.t1;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS exon 8343 8553 . + . ID=g512.t1.exon6;Parent=g512.t1 NODE_1885_length_8736_cov_41.4924 AUGUSTUS CDS 8343 8553 . + 1 ID=cds.g512.t1;Parent=g512.t1 #PROT g512.t1 g512 MAPTKAKAKPANASMSAVFDDAQRGFSNHRKNVKLLQEMQRTWTTEAFRTEFVAHVNRILLIFKREPAVERLVEFVSSFATLKNADGEHLNAAEGEEGQSDENNDDFAVFLMRYLLHFADAKDKAVRFRVCQIVGKVLNNLGEDAEIDGELWEGIQTEMARRLKDKIPVVRMQAVNALSRLQEPADADCPIIAEFVRIATKDSSADVRRTVIGHLSLNKITLRVVVGRMRDANEGVRKQAIRVVTEKVAIKALSIADRVEIVRSGLGDRAESVQAQCTALIAKNWLRAVSNNIAELLRCLDVETNESLGEKIVAAVVSSVGDFGYTADHFVRMLSGEGEFGPAEALLWKSLCAYHSGGAQTLVGKKASHPLSEERFEQLAPELSGLCEIIRRTVAEIEGRAATRKDGDNADDDGEEEEEDEEENTLLDIQDAFVARQLLGMAATLDMSDEVGRKNCGRLCVDLLSRTSTPASLVKPLVALIASVHPGEEERMRVVNDTINGIRAAPAPAKAEKAPKEPKVVKETAESRAAQRALDLRIAALRIRALEARDKKEACVAKDDFQGASEAKEELDAILKEQAALIKLQEEPDVEVSDDDDEEDAHSPPAVVYLDTPEINVRCLLVASALFEGLTIRGPASKASNASTATAQRQATVRSLVDSLVLPSIQTEDADVRNCAMECLGLACLLDGDFARRHLLLFLQAAQVDQEAVIATALRALFDIALVFGPSLVATGASEGDDDVRQSIVPVLMRYLGNDSPLLRTVATEGFSKLALHGIAASPQLLSHLLILYFNPTTEDDVHLRQCLNVFFPAFAFASRGNQQTVERALLPTVRTFTAAPETSPLATVPAHSVAQFIIYLCGKPPMPTGTAAATASRMSQMGMHDDLAVSLCNEILVDASSQMSKALIKALGSLKLSFEDEENIRGLRVLAEQMLKAVTDKSGLRHVIAFADSLRSDDGRNDAEDDETALAIDDTDEKRAESSVTASAESGIVATTETSDAIASTAAITTESAPKKRVSKPKAESQSQPRAKKPSKKAQTAAAVEEPRVAPVATVSDAIGGDSDDEIIALKKTTKAKATSSRRKQRTDDALCQSDDSDGENAIKKSKESATGTCGPAEKQHAVARPSRKAATAAKAALTAIDNLVDDSD* # PASA_UPDATE: g511.t1, single gene model update, valid-1, status:[pasa:asmbl_2909,status:12], valid-1 NODE_1885_length_8736_cov_41.4924 . gene 946 3456 . - . ID=g511;Name=g511.t1 NODE_1885_length_8736_cov_41.4924 . mRNA 946 3456 . - . ID=g511.t1;Parent=g511;Name=g511.t1 NODE_1885_length_8736_cov_41.4924 . exon 3167 3456 . - . ID=g511.t1.exon1;Parent=g511.t1 NODE_1885_length_8736_cov_41.4924 . CDS 3167 3456 . - 0 ID=cds.g511.t1;Parent=g511.t1 NODE_1885_length_8736_cov_41.4924 . exon 946 3049 . - . ID=g511.t1.exon2;Parent=g511.t1 NODE_1885_length_8736_cov_41.4924 . CDS 1189 3049 . - 1 ID=cds.g511.t1;Parent=g511.t1 NODE_1885_length_8736_cov_41.4924 . three_prime_UTR 946 1188 . - . ID=g511.t1.utr3p1;Parent=g511.t1 #PROT g511.t1 g511 MGDSFGKGVDDGGEWEDGRHASDTTHHVPLGLSSPAFPGALTAASYGHSRVIVHIDIDCFYAQCHMVRDATLRDKPLAVQQKHIVVTCNYPARARGIGKLSLIKDAVKQCPELVIVDGSDLTDYRAYSLRIFKLFKRFTPSVERLVFDEFFLDVTDIVKTSMRATSDADQTRPAWRGHVVCSADKGAVPAGHVPASCDLGDCCDCHMRLRIGSEIAERARAALEAELGFTSSAGTGVCKLHAKMASGIHKPCDQTVLLPSCVRGMLEEMHARALPGVGWALWQRLKTRQPPIATVKDLQSLSIDDLIGEGVAPGLASRVHAACRGVDEEPVVPWASPKTLSVEDSFPLCVDRADLHRRLHDLCTMLRQRIDAEYDDSGRIPRVFRLVIRKKPESEGVRAYSHARESRQCALPAALHPRHAPAIIQADAASSAEHNAQSEARVDGLLRLSLSLFDKMVPPKSRFRLTLLNVGVASFSEPPVRGKGSLDAFVAFSPTAKPGCEVTTTSLGNTRHAIDCGNSGVKIITDSASNGANCHLSRPPSSRDTTGTGTVLIAPPDVDAQVFAALPIDIQREIAAQFASSVAGSRTSNTHLQKSAVSAAPPPSHFGGVRKKQPVAQKGQGSIQSLFKKMERVGQASSGALHDVSKVTNCSVATAEPRHLPASPFGLSRDECVSDYNSELGDGGRATASFVCDVCGECLPAWCGDAHAMFHASADQ* # PASA_UPDATE: g510.t1, single gene model update, valid-1, status:[pasa:asmbl_2907,status:12],[pasa:asmbl_2908,status:12], valid-1 NODE_1885_length_8736_cov_41.4924 . gene 2 903 . + . ID=g510;Name=g510.t1 NODE_1885_length_8736_cov_41.4924 . mRNA 2 903 . + . ID=g510.t1;Parent=g510;Name=g510.t1 NODE_1885_length_8736_cov_41.4924 . exon 2 44 . + . ID=g510.t1.exon1;Parent=g510.t1 NODE_1885_length_8736_cov_41.4924 . CDS 2 44 . + 0 ID=cds.g510.t1;Parent=g510.t1;5_prime_partial=true NODE_1885_length_8736_cov_41.4924 . exon 340 425 . + . ID=g510.t1.exon2;Parent=g510.t1 NODE_1885_length_8736_cov_41.4924 . CDS 340 425 . + 2 ID=cds.g510.t1;Parent=g510.t1 NODE_1885_length_8736_cov_41.4924 . exon 633 903 . + . ID=g510.t1.exon3;Parent=g510.t1 NODE_1885_length_8736_cov_41.4924 . CDS 633 686 . + 0 ID=cds.g510.t1;Parent=g510.t1 NODE_1885_length_8736_cov_41.4924 . three_prime_UTR 687 903 . + . ID=g510.t1.utr3p1;Parent=g510.t1 #PROT g510.t1 g510 SNFEHPGWKTVSGGAKNLITRLLKKEPLERLSANEALAHAFIKQLEVTFPDRRRTSYAAQ* # PASA_UPDATE: g11913.t1, single gene model update, valid-1, status:[pasa:asmbl_7896,status:12], valid-1 NODE_5155_length_993_cov_30.7974 . gene 29 965 . + . ID=g11913;Name=g11913.t1 NODE_5155_length_993_cov_30.7974 . mRNA 29 965 . + . ID=g11913.t1;Parent=g11913;Name=g11913.t1 NODE_5155_length_993_cov_30.7974 . five_prime_UTR 29 49 . + . ID=g11913.t1.utr5p1;Parent=g11913.t1 NODE_5155_length_993_cov_30.7974 . exon 29 215 . + . ID=g11913.t1.exon1;Parent=g11913.t1 NODE_5155_length_993_cov_30.7974 . CDS 50 215 . + 0 ID=cds.g11913.t1;Parent=g11913.t1 NODE_5155_length_993_cov_30.7974 . exon 562 965 . + . ID=g11913.t1.exon2;Parent=g11913.t1 NODE_5155_length_993_cov_30.7974 . CDS 562 764 . + 2 ID=cds.g11913.t1;Parent=g11913.t1 NODE_5155_length_993_cov_30.7974 . three_prime_UTR 765 965 . + . ID=g11913.t1.utr3p1;Parent=g11913.t1 #PROT g11913.t1 g11913 MMGFFRGGARWGLGMTTLAALFHGVSIYSRERRGADDALNYGVGGAASGSLFAFRHGLAGLALGIVIGASVGLGVGGIIQSLHIIDRELKAKGSSAVSMATTTAPAADTTADASSGAAAEKP* # ORIGINAL: g652.t1 original gene structure, not modified by PASA NODE_4010_length_2353_cov_34.2375 AUGUSTUS gene 157 2294 . + . ID=g652;Name=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS mRNA 157 2294 . + . ID=g652.t1;Parent=g652;Name=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 157 280 . + . ID=g652.t1.exon1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 157 280 . + 0 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 481 652 . + . ID=g652.t1.exon2;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 481 652 . + 2 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 904 960 . + . ID=g652.t1.exon3;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 904 960 . + 1 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 1147 1245 . + . ID=g652.t1.exon4;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 1147 1245 . + 1 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 1549 1627 . + . ID=g652.t1.exon5;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 1549 1627 . + 1 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 1841 1891 . + . ID=g652.t1.exon6;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 1841 1891 . + 0 ID=cds.g652.t1;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS exon 2223 2294 . + . ID=g652.t1.exon7;Parent=g652.t1 NODE_4010_length_2353_cov_34.2375 AUGUSTUS CDS 2223 2294 . + 0 ID=cds.g652.t1;Parent=g652.t1 #PROT g652.t1 g652 VDVNDTCLVLSEPPFNFKSIAQTTNEVVFEEYGFAACSRRVGSSLALLDGDATQSIGDNGDVAASSLSGAACIVVDSGYSFTHVVPHLDGRKITHAIRRIDVGGKLLTNYLKDVISYRQINVMEETHVVNQMKEDACYVSPNVIDDLVIAAKRGAGNTIVCDYVLPNFTHIKRGFIRQKGPDAKRVDGETGNEQTVVMNNERFMVPEVLFHPSDIGG* # PASA_UPDATE: g3333.t1, single gene model update, valid-1, status:[pasa:asmbl_8091,status:12],[pasa:asmbl_8095,status:12],[pasa:asmbl_8096,status:12],[pasa:asmbl_8097,status:12],[pasa:asmbl_8098,status:12],[pasa:asmbl_8099,status:12], valid-1 NODE_546_length_21480_cov_38.4091 . gene 1923 6932 . - . ID=g3333;Name=g3333.t1 NODE_546_length_21480_cov_38.4091 . mRNA 1923 6932 . - . ID=g3333.t1;Parent=g3333;Name=g3333.t1 NODE_546_length_21480_cov_38.4091 . five_prime_UTR 6625 6932 . - . ID=g3333.t1.utr5p1;Parent=g3333.t1 NODE_546_length_21480_cov_38.4091 . exon 4508 6932 . - . ID=g3333.t1.exon1;Parent=g3333.t1 NODE_546_length_21480_cov_38.4091 . CDS 4508 6624 . - 0 ID=cds.g3333.t1;Parent=g3333.t1 NODE_546_length_21480_cov_38.4091 . exon 1923 4161 . - . ID=g3333.t1.exon2;Parent=g3333.t1 NODE_546_length_21480_cov_38.4091 . CDS 1923 4161 . - 1 ID=cds.g3333.t1;Parent=g3333.t1 #PROT g3333.t1 g3333 MAPRASRASMRGAAPAKGHRKMPLIPPFKALKVAVDVLARNASGVSPPITIPHGFQLIKKIPHLRPPRVVVYDPTNAAYASVDLKVVNLFREDRHAKIQLSANVVCLVFCKRHRIFIGYTLDMRAKIFSDTFDILYDAATPKAILTLGFDDANDEVIMAGVGTVSFWRVVATKSKDYRYQLPKNSRSLLPTRPRSEEFSLQCRLTIDHTLPMDSLISTLHVDAAESKLYVAMDSNVFVFSTTDGSKVEILKDRHDNSITCITHVPSHDYLLTASTDGTVRAWNATGSLVHTFAGHTASVTGIVLFPAELKFVTCSTDGSLRMWDLETFEEAYRLEVQEELIGMGAIDVSHFFVFSPAGIQVWNNNQYLHPFTTLRSDLTMMRRVESDNGRPARILTMSSDGSVRVVSPVTGAILTIAFPVVETTPLVDVVLGSEEERLYALLANGDIYVFTTTTNPCQLKEVVKNGEQRADAACTCIAFSRIPRDEDETITRGQTPLSSSRSAAPTPTSVSSGGGGGDDVSVALPKRNLPAVRVSSPGDMLLFGGRRTGQLVVISLEEKGAVKLCVQAHAKGVNSLVVSKDYRRIVSLGDDSVARVWQVSRPDVDARSGGPVTFLGGAAPVPPPVVLTSERSIHCDSPPLRGCLLGNLLCASHKDRSLVFYNLDDADSSPIRHSVDEDHTEEINTIAACSALGLVLTSSDDNSLKVWDADNALVREIQLGQAIKAACFASLRGDIILSTSGNIALARVTDFLPLRQLSVLAEPHVNIEDDAIEEPIAFDAHIEVWKFDSKFKTLTSRDSSAGEYGTANITEVHSGASSAGTDGRHSANLRHKAREFEKQVLNKKHQQAENREQSKLQKKRKSVRMRAGMDLLRHIGLQLPLSTKDADADDQNDDGDNGDNDDDSAALEDDQGRILGDGTPSVFETDLIQRLIEGSMLARMEKHPVAPDGVIPNSVVLRLFKRSLMSKPAEQRWRPRPVRGAPPVPLPADDFDAEAITEWASDEDLSEQQPPAPVPAPAPETPVEVKPPPQKMYKVPSRGNVAPKLPPPPTPREPTPEPPPREPTPVPRDPTPEPPPPKELTPVPTREPTPVPPREPTPSPPEPPTYPPSPEPEDLPAVIKEVVGLAWFPSIPKVRRTVDGVLDQLVSLLSTGDWTIRRSACEALGRIHSEMGIPEVTTRALPAVIPLVSHHKWELRMQACRTLGQMGIRTDGAVAALISRLVDEVAEVGDQARHALFVLAGIRDKESLRREMVRLGLIDDDGVGNDREVLAGLREKAALEAEKAMMHSVLPLPAPTQRVTNRLKGWLVTVQNSFLPDGSDDRPRRKASQPAPDIPGLAPGSRVQKKTTLGHGGGGGSVSLSHSSMNKSISRIPNLESQRRSSSIVFRIRQTVRRMDVLKMYVPSESPDHSHGGRITLPPINSASPERTSPTHVHGRPSTLVMTAYDIHAAF* # PASA_UPDATE: g3336.t1, single gene model update, valid-1, status:[pasa:asmbl_8090,status:3], valid-1 NODE_546_length_21480_cov_38.4091 . gene 16160 18371 . + . ID=g3336;Name=g3336.t1 NODE_546_length_21480_cov_38.4091 . mRNA 16160 18371 . + . ID=g3336.t1;Parent=g3336;Name=g3336.t1 NODE_546_length_21480_cov_38.4091 . five_prime_UTR 16160 16342 . + . ID=g3336.t1.utr5p1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . exon 16160 16404 . + . ID=g3336.t1.exon1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . CDS 16343 16404 . + 0 ID=cds.g3336.t1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . exon 16538 16649 . + . ID=g3336.t1.exon2;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . CDS 16538 16649 . + 1 ID=cds.g3336.t1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . exon 16876 17098 . + . ID=g3336.t1.exon3;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . CDS 16876 17098 . + 0 ID=cds.g3336.t1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . exon 17214 17522 . + . ID=g3336.t1.exon4;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . CDS 17214 17522 . + 2 ID=cds.g3336.t1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . exon 17709 18371 . + . ID=g3336.t1.exon5;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . CDS 17709 17947 . + 2 ID=cds.g3336.t1;Parent=g3336.t1 NODE_546_length_21480_cov_38.4091 . three_prime_UTR 17948 18371 . + . ID=g3336.t1.utr3p1;Parent=g3336.t1 #PROT g3336.t1 g3336 MALNGVPVTPSGGVLIPPGERMMYSTTGVQFSIESGGGYPGNNGSYYGKGDVILTDRRILFVTKPPLEVFKSFALPFELIFDAKLNQPIFGANNFSGKVDPVADAGLAGTGEFKLTFKNGGAAEFATLFLHMNAPREVQAGPPLVNVTAIFQQNGQPAPIHGVSIPTRMVSGGSGGGGGGGRRPLQHNPGTTATAPRVGRAENTMGYDTYPAAAPPPYSAPSYGPPTHGVPQNAADAKAREAGHSTVSAASPSYRPPAGMVQTDAPLQSATYQGAPYNEPPPEYTDGVAYGAPQGGGGGGGQYASPSGVHRYPM* # ORIGINAL: g3337.t1 original gene structure, not modified by PASA NODE_546_length_21480_cov_38.4091 AUGUSTUS gene 18733 21032 . - . ID=g3337;Name=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS mRNA 18733 21032 . - . ID=g3337.t1;Parent=g3337;Name=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS exon 20775 21032 . - . ID=g3337.t1.exon1;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS CDS 20775 21032 . - 0 ID=cds.g3337.t1;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS exon 20393 20583 . - . ID=g3337.t1.exon2;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS CDS 20393 20583 . - 0 ID=cds.g3337.t1;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS exon 19999 20165 . - . ID=g3337.t1.exon3;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS CDS 19999 20165 . - 1 ID=cds.g3337.t1;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS exon 19234 19703 . - . ID=g3337.t1.exon4;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS CDS 19234 19703 . - 2 ID=cds.g3337.t1;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS exon 18733 19014 . - . ID=g3337.t1.exon5;Parent=g3337.t1 NODE_546_length_21480_cov_38.4091 AUGUSTUS CDS 18733 19014 . - 0 ID=cds.g3337.t1;Parent=g3337.t1 #PROT g3337.t1 g3337 MPWIMGDAVPFHPSDSVANAKRVLHVSSVPSHIVGREKEQVVVLDFLRQCVEGDCAGSLYVSGAPGTGKTASLREVTADFRAWLAKSGRVETRVAYVNCMSVRDPKAIYAHVLQSLGIEIGGNVKDAQEALQRLAVPETKTKTKKPAPVWVLIADEIDQLASSDQDVLYRLFSWAKFATSRLVLVGIANALDLTERLLPRLRAKMCEPNLLNFLPYDKDQIKAVILDRLGCIGGADVVFEPMAIEFAARKVAAHSGDVRKALDVCRRALEVAEAESRATNSPGTCNANATAAQHTPTPTGNHVATTKKVARAGLGHVNKVLQEVYGSPHVQKMRALGLHAKLLLCALFLAIDGKQRDVTGSKLLEAYVSICRRRSITPVTSSEFADISGCLSASGILNVTGVGKSFVRDVRLSKVSPSIHPSDIEFALKEQPLFKTIIEECAQDSMRLASLELAK* # PASA_UPDATE: g3335.t1, single gene model update, valid-1, status:[pasa:asmbl_8092,status:12],[pasa:asmbl_8093,status:12],[pasa:asmbl_8100,status:12], valid-1 NODE_546_length_21480_cov_38.4091 . gene 8623 15500 . - . ID=g3335;Name=g3335.t1 NODE_546_length_21480_cov_38.4091 . mRNA 8623 15500 . - . ID=g3335.t1;Parent=g3335;Name=g3335.t1 NODE_546_length_21480_cov_38.4091 . five_prime_UTR 15020 15500 . - . ID=g3335.t1.utr5p1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 14955 15500 . - . ID=g3335.t1.exon1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 14955 15019 . - 0 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 14656 14784 . - . ID=g3335.t1.exon2;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 14656 14784 . - 1 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 14294 14427 . - . ID=g3335.t1.exon3;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 14294 14427 . - 1 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 13963 14111 . - . ID=g3335.t1.exon4;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 13963 14111 . - 2 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 13701 13806 . - . ID=g3335.t1.exon5;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 13701 13806 . - 0 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 13347 13470 . - . ID=g3335.t1.exon6;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 13347 13470 . - 2 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 12727 12913 . - . ID=g3335.t1.exon7;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 12727 12913 . - 1 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 11696 12598 . - . ID=g3335.t1.exon8;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 11696 12598 . - 0 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 11228 11437 . - . ID=g3335.t1.exon9;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 11228 11437 . - 0 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 10208 10730 . - . ID=g3335.t1.exon10;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 10208 10730 . - 0 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . exon 8623 9787 . - . ID=g3335.t1.exon11;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . CDS 9309 9787 . - 2 ID=cds.g3335.t1;Parent=g3335.t1 NODE_546_length_21480_cov_38.4091 . three_prime_UTR 8623 9308 . - . ID=g3335.t1.utr3p1;Parent=g3335.t1 #PROT g3335.t1 g3335 MFSRFSEALGRNKSKLSLEHLKYLHTVLVRNAVVTDGNKSLLVETLRSIAEILIWGDQNDNRVFDFFLEKNMLTFFLRILGQRTGRYVKVQLLQTLSILFENIRNETSIYYLLSNNHINEIIVHKFDFSDEEVLAYYISFIKTLSLRLNTHTIHFFFNEHLHDFPLYTEAIKFFNHHESMVRIAVRTLTLNVYKVDDENMLSFILNKTAVPYFSNLVWFIGSQSIELDACVKTDADHLRRNRLDEFVAEHLDHLHYLNDIVSLGIEPLSQCLSRHLLKKLFLPLYVYNLSRRLQIADKEPTASLSPLLSLFLLSQVFLIFTYRPLVSSLTDAILCGNMDASPWTHGRLEAPYVLGRPAATPDERILQSPVDIPMTPVPNSSVGGGPSSLASNSAASVSSVHGSGSQAKIRERAVSKRVRDARAEFTEAKEAHIAEEETPLSSGSGSALSPQHPANGSTTAMLPVASTSENGNQASGSPSVSFSLPDSGIVVNESVVLSGAASARAVDVAAEVVVDAVIVTGRLARSASDGDSVLGGRTSFGTVFRDALFEYLDCSVDDVNTLSALCLVHSMVRNQGIPRQLLEAAEMCPQRLRKARMLLDELTSRCSSPTISFIDGEDGAEKASQKSGGNKDAMSAAVGAQSERDDDADSLSATPKDKERPSCDASVEVSPYNAVLVERLLQILYNSVGSDSRVRLVTLEMAIAVLQELVYFNGASPCLNDAHMGLLEDVVAVSTEQLRAVCKGTADDIFLDMFEGEWAAMRPVNVEYLMMDPSILLPPTNTPLTGIEFTKRLPCGEVEKSRRAIRVFFMLRRLLLTLRRVKETELPLADAADPVQLNDVLDLNNSDLIACRVTDAARPSVSVTRFLVIDMARLILVEPDTTRLGWGVVRFVAFLQNVETAADKVDPRVLTVGVYAAARPAATTPAATPTATPSAAAATWSGSLLFDDHIRCLAARQYLEKGRSELRARKMRKVANLIGIDAAHRTPTTQQQLLAEAMQATL* # PASA_UPDATE: g3332.t1, single gene model update, valid-1, status:[pasa:asmbl_8094,status:12], valid-1 NODE_546_length_21480_cov_38.4091 . gene 306 1079 . + . ID=g3332;Name=g3332.t1 NODE_546_length_21480_cov_38.4091 . mRNA 306 1079 . + . ID=g3332.t1;Parent=g3332;Name=g3332.t1 NODE_546_length_21480_cov_38.4091 . five_prime_UTR 306 307 . + . ID=g3332.t1.utr5p1;Parent=g3332.t1 NODE_546_length_21480_cov_38.4091 . exon 306 1079 . + . ID=g3332.t1.exon1;Parent=g3332.t1 NODE_546_length_21480_cov_38.4091 . CDS 308 835 . + 0 ID=cds.g3332.t1;Parent=g3332.t1;5_prime_partial=true NODE_546_length_21480_cov_38.4091 . three_prime_UTR 836 1079 . + . ID=g3332.t1.utr3p1;Parent=g3332.t1 #PROT g3332.t1 g3332 CSRSWWNNAIILAELAFLVAGVFLSFLVRKAPSGFNESRGIVATIYNWIVMGVLLIVLRLVISEKPDTSYALDCLFVWLTIGVMVGIIFGPKLYLVFRGKGELAQTNLYGDSNERKSSNAANATGDFTLSPSIETNLLKENGDLKGEVRRLMGEMEKLKMSMVSTGNRHLSGSYQ* # PASA_UPDATE: g3334.t1, single gene model update, valid-1, status:[pasa:asmbl_8089,status:12], valid-1 NODE_546_length_21480_cov_38.4091 . gene 7230 8515 . + . ID=g3334;Name=g3334.t1 NODE_546_length_21480_cov_38.4091 . mRNA 7230 8515 . + . ID=g3334.t1;Parent=g3334;Name=g3334.t1 NODE_546_length_21480_cov_38.4091 . five_prime_UTR 7230 7348 . + . ID=g3334.t1.utr5p1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . exon 7230 7369 . + . ID=g3334.t1.exon1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . CDS 7349 7369 . + 0 ID=cds.g3334.t1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . exon 7486 7566 . + . ID=g3334.t1.exon2;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . CDS 7486 7566 . + 0 ID=cds.g3334.t1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . exon 7825 7934 . + . ID=g3334.t1.exon3;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . CDS 7825 7934 . + 0 ID=cds.g3334.t1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . exon 8083 8515 . + . ID=g3334.t1.exon4;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . CDS 8083 8353 . + 1 ID=cds.g3334.t1;Parent=g3334.t1 NODE_546_length_21480_cov_38.4091 . three_prime_UTR 8354 8515 . + . ID=g3334.t1.utr3p1;Parent=g3334.t1 #PROT g3334.t1 g3334 MASTKMKDMSCLKNRLASFAGWPLPLDCLVTPIALAHAGFYHCPTDDSPDSVQCFSCGKALDGWDPQDDPMAEHRKHSGACPYLRQLDAGEGAPASADAQASSHAHIFAQFPPLPNETVEEYLKRRCDAETERLVADAEAMIARFADAAKATRTELEGLV* # PASA_UPDATE: g5066.t1, single gene model update, valid-1, status:[pasa:asmbl_5788,status:3], valid-1 NODE_3257_length_3907_cov_32.6576 . gene 1 2803 . + . ID=g5066;Name=g5066.t1 NODE_3257_length_3907_cov_32.6576 . mRNA 1 2803 . + . ID=g5066.t1;Parent=g5066;Name=g5066.t1 NODE_3257_length_3907_cov_32.6576 . five_prime_UTR 1 284 . + . ID=g5066.t1.utr5p1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . exon 1 366 . + . ID=g5066.t1.exon1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . CDS 285 366 . + 0 ID=cds.g5066.t1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . exon 677 866 . + . ID=g5066.t1.exon2;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . CDS 677 866 . + 2 ID=cds.g5066.t1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . exon 1137 1263 . + . ID=g5066.t1.exon3;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . CDS 1137 1263 . + 1 ID=cds.g5066.t1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . exon 1729 1829 . + . ID=g5066.t1.exon4;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . CDS 1729 1829 . + 0 ID=cds.g5066.t1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . exon 2235 2803 . + . ID=g5066.t1.exon5;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . CDS 2235 2802 . + 1 ID=cds.g5066.t1;Parent=g5066.t1 NODE_3257_length_3907_cov_32.6576 . three_prime_UTR 2803 2803 . + . ID=g5066.t1.utr3p1;Parent=g5066.t1 #PROT g5066.t1 g5066 MADMDLFIGHPACINQSVYGLWLQGNSLEKAVAARQSRGFASHNASAIHSDTIDQYQVFAMLEHYLKHPQQLASQSLVPLGSDLQHMLIERYFDFDEAVMRELLGKKLTAGLRKVLDDVSERSKINLQSCRRQFDNLKRIYKAVEDTEGGLAENVQNAFLLSRDMSNMYARIVFVCANKLEVSKKRVAHLAFSDIVQCAGVMMALWTPVGAAPGVQLDPVFLQELRDLKFLLNNDRDVLAEHRALVAAELAAHGDTFKTLHAHFKGVARACLAIGAGLSQPKEFRDVFVDVVDKVVDPLRALDWTLIEIDYFFPALFRSFDSIQSLSKQHRMRFSPVYTRLVRGIHHCVQRLYKP* # ORIGINAL: g11837.t1 original gene structure, not modified by PASA NODE_677_length_19185_cov_41.6 AUGUSTUS gene 12996 17178 . + . ID=g11837;Name=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS mRNA 12996 17178 . + . ID=g11837.t1;Parent=g11837;Name=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 12996 13103 . + . ID=g11837.t1.exon1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 12996 13103 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 13229 13524 . + . ID=g11837.t1.exon2;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 13229 13524 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 14336 14469 . + . ID=g11837.t1.exon3;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 14336 14469 . + 1 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 14856 15037 . + . ID=g11837.t1.exon4;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 14856 15037 . + 2 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 15231 15279 . + . ID=g11837.t1.exon5;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 15231 15279 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 15480 15574 . + . ID=g11837.t1.exon6;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 15480 15574 . + 2 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 15995 16102 . + . ID=g11837.t1.exon7;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 15995 16102 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 16278 16415 . + . ID=g11837.t1.exon8;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 16278 16415 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 16679 16775 . + . ID=g11837.t1.exon9;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 16679 16775 . + 0 ID=cds.g11837.t1;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 17072 17178 . + . ID=g11837.t1.exon10;Parent=g11837.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 17072 17178 . + 2 ID=cds.g11837.t1;Parent=g11837.t1 #PROT g11837.t1 g11837 MRSKRARLGAGNRRPLKAPKDASTRSEPAPPAPAKKATSVGTAASDSWKTVSMISYDGNFDGAYPIIRSASSVTRTIRLIIRALNDCKGSPTSSLAYRLAYGWCDTSPTGCPTPISLGEGRSYFGSVNQPEGGWEAGYEEASKAFKPDALATDLTGRSFIVTGANSGIGKETTLELVKRGATVHMVCRDVARAEAAKSEIAAAATNGAQLYVHQLDMSAPSAIKTFVKEFLEKETKLDGLVNNAGCMINKLETTPEGVEKNFATNTLGTFILTTELIPLLQKGDNARVITVSSGGMLVQKLDVEDPQCLKMSPFDGTMAYAQNKRQQVVMTSLLAKEYASTGISFYSMHPGWADTPAVRDAMPGFYEKMKDRLRSATQGADTVVWLCASKDISKGDNGQFFEDRKVVPIHLPLAWTRSSAEEEAKFLKYLTDLASKL* # ORIGINAL: g11834.t1 original gene structure, not modified by PASA NODE_677_length_19185_cov_41.6 AUGUSTUS gene 4459 4861 . - . ID=g11834;Name=g11834.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS mRNA 4459 4861 . - . ID=g11834.t1;Parent=g11834;Name=g11834.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 4811 4861 . - . ID=g11834.t1.exon1;Parent=g11834.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 4811 4861 . - 0 ID=cds.g11834.t1;Parent=g11834.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 4459 4692 . - . ID=g11834.t1.exon2;Parent=g11834.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 4459 4692 . - 0 ID=cds.g11834.t1;Parent=g11834.t1 #PROT g11834.t1 g11834 MSVVTMILKAIASFLVLAGCALYSVFLGRMYDDPNIFFGADISSATVRKNLWYFWLIVFFQLFTIVGLAFRSSLISAHSPSIAPHILCQHTYRR* # ORIGINAL: g11836.t1 original gene structure, not modified by PASA NODE_677_length_19185_cov_41.6 AUGUSTUS gene 8909 10153 . + . ID=g11836;Name=g11836.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS mRNA 8909 10153 . + . ID=g11836.t1;Parent=g11836;Name=g11836.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 8909 10153 . + . ID=g11836.t1.exon1;Parent=g11836.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 8909 10153 . + 0 ID=cds.g11836.t1;Parent=g11836.t1 #PROT g11836.t1 g11836 MCNPFTGDATAADGNDIANTNYLLARAVDSFEKAIEYLRNKLKERDMHLQKEWGKELARLRKEQKERGRALHKERMKEMALLRKEQKERGTALHKEWMKEIALLRKELKNMIGGSELPFHFYNFHGLFLTVTVLCELRLAGNMVEVSLSEISRPGCLSLMTAAGIESVPQAADLAITDDIVTRFCAKHPNVDFRAPFNWLASAEHSEANRKKYVDHIKERIVNPNLHVVDAMKKHLFSAEFPDKIYTGATDVAICTHSSASVTPLGILSSLLVAINLKKPRDMSESESQAIAELIVGAITTKRRIVVMASDLTEDFRFYWVEDKIVRYLLVDDAAQAFCVLNMMCDGLPSTVRRGITGVANQKIRPSVLHLPKVQLGDVANINSILSDLDETDAQETRILLARQAIARTPWLSA* # PASA_UPDATE: g11832.t1, single gene model update, valid-1, status:[pasa:asmbl_8824,status:12],[pasa:asmbl_8826,status:12], valid-1 NODE_677_length_19185_cov_41.6 . gene 110 3423 . + . ID=g11832;Name=g11832.t1 NODE_677_length_19185_cov_41.6 . mRNA 110 3423 . + . ID=g11832.t1;Parent=g11832;Name=g11832.t1 NODE_677_length_19185_cov_41.6 . five_prime_UTR 110 111 . + . ID=g11832.t1.utr5p1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 110 244 . + . ID=g11832.t1.exon1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 112 244 . + 0 ID=cds.g11832.t1;Parent=g11832.t1;5_prime_partial=true NODE_677_length_19185_cov_41.6 . exon 554 1064 . + . ID=g11832.t1.exon2;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 554 1064 . + 2 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 1183 1548 . + . ID=g11832.t1.exon3;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 1183 1548 . + 1 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 1933 2056 . + . ID=g11832.t1.exon4;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 1933 2056 . + 1 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 2369 2465 . + . ID=g11832.t1.exon5;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 2369 2465 . + 0 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 2794 2915 . + . ID=g11832.t1.exon6;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 2794 2915 . + 2 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . exon 3202 3423 . + . ID=g11832.t1.exon7;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . CDS 3202 3372 . + 0 ID=cds.g11832.t1;Parent=g11832.t1 NODE_677_length_19185_cov_41.6 . three_prime_UTR 3373 3423 . + . ID=g11832.t1.utr3p1;Parent=g11832.t1 #PROT g11832.t1 g11832 AVTSRNSVCFRGRWIDGFRHGAGVVTWPDGRMELREYNMGVLVAARAMDDADGANFDALSRVAALEAALAAANLTKDVLLAKMNATHAAELAAKDTEYSDRLRSMESAFSAKMEGEMRMRAQFEEELKSKMECVEEERETMKDTFQLALEIQKREVEKTRADYDAAVMEASEAQGRAEVERRLALDALRMELEAEKMPLLERIAFLEKSCEDFVKAQEMFMIESDARETEKLDALRKETEARIEAITANHVSEVDNLRHLCERQVLRVKEDYRGRVELQERERLLNELSLAEQALSEFKAEAETHLEVARAQSQRTIDELTAAAERDVAAIRRELDSALNRLSIAHEENARVASSHAVEISGLKASITQLRNDLTTFQDVSQRLEADVAARQRDVAMLKDTLGRLEGTAIEGLSLDELRCLSDSIKEHRRAVNRALIIAEEEERRRAMPAQTDVDASANTCAICFERPLDTILRPCNHAFCNHCADVMSSCPKCRGRVHAREHIYLN* # ORIGINAL: g11833.t1 original gene structure, not modified by PASA NODE_677_length_19185_cov_41.6 AUGUSTUS gene 3785 4319 . - . ID=g11833;Name=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS mRNA 3785 4319 . - . ID=g11833.t1;Parent=g11833;Name=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 4215 4319 . - . ID=g11833.t1.exon1;Parent=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 4215 4319 . - 0 ID=cds.g11833.t1;Parent=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 4015 4062 . - . ID=g11833.t1.exon2;Parent=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 4015 4062 . - 0 ID=cds.g11833.t1;Parent=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 3785 3862 . - . ID=g11833.t1.exon3;Parent=g11833.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 3785 3862 . - 0 ID=cds.g11833.t1;Parent=g11833.t1 #PROT g11833.t1 g11833 MNVALSLLLIDQTTTLFVGAFQCDTEDNYKLSACKYIGAGLAGAITVAFAQFLSVFIADGAAHEDAQREAKYHGAA* # ORIGINAL: g11838.t1 original gene structure, not modified by PASA NODE_677_length_19185_cov_41.6 AUGUSTUS gene 17938 18868 . - . ID=g11838;Name=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS mRNA 17938 18868 . - . ID=g11838.t1;Parent=g11838;Name=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 18749 18868 . - . ID=g11838.t1.exon1;Parent=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 18749 18868 . - 0 ID=cds.g11838.t1;Parent=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 18196 18333 . - . ID=g11838.t1.exon2;Parent=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 18196 18333 . - 0 ID=cds.g11838.t1;Parent=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS exon 17938 17982 . - . ID=g11838.t1.exon3;Parent=g11838.t1 NODE_677_length_19185_cov_41.6 AUGUSTUS CDS 17938 17982 . - 0 ID=cds.g11838.t1;Parent=g11838.t1 #PROT g11838.t1 g11838 MGIHFGPPDCEIDPLTGRMDYFGPVVNRAARVSSLADGGQVLLSNSCWEDVQTHLDELADALADPDVKVLGVFKLKDMEAEETVRQVLPRTLCKRNFATG* # PASA_UPDATE: g11835.t1, single gene model update, valid-1, status:[pasa:asmbl_8825,status:12],[pasa:asmbl_8827,status:12], valid-1 NODE_677_length_19185_cov_41.6 . gene 5825 7969 . + . ID=g11835;Name=g11835.t1 NODE_677_length_19185_cov_41.6 . mRNA 5825 7969 . + . ID=g11835.t1;Parent=g11835;Name=g11835.t1 NODE_677_length_19185_cov_41.6 . five_prime_UTR 5825 5852 . + . ID=g11835.t1.utr5p1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 5825 5885 . + . ID=g11835.t1.exon1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 5853 5885 . + 0 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 6045 6221 . + . ID=g11835.t1.exon2;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 6045 6221 . + 0 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 6368 6481 . + . ID=g11835.t1.exon3;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 6368 6481 . + 0 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 6714 6774 . + . ID=g11835.t1.exon4;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 6714 6774 . + 0 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 6937 6969 . + . ID=g11835.t1.exon5;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 6937 6969 . + 2 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 7108 7170 . + . ID=g11835.t1.exon6;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 7108 7170 . + 2 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 7390 7496 . + . ID=g11835.t1.exon7;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 7390 7496 . + 2 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . exon 7675 7969 . + . ID=g11835.t1.exon8;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . CDS 7675 7800 . + 0 ID=cds.g11835.t1;Parent=g11835.t1 NODE_677_length_19185_cov_41.6 . three_prime_UTR 7801 7969 . + . ID=g11835.t1.utr3p1;Parent=g11835.t1 #PROT g11835.t1 g11835 MLPTSRPSTIEPAGIRSTRIYRLLIIMANTRVLLALFALLAIAALASAQGGAKPASAQGGEKKGPKITDKVFFDITIGGKPAGRVVIGLYGATVPKTVQNFVALSTGEKGFGYKGSIFHRVIKNFMIQGGDFTNRDGTGGKSIYGNKFEDENFKLKHEGPGVLSMANAGPNTNGSQFFITTVKTPWLDGRHVVFGRVIEGMDIVTRVENNPTKSGDRPVEEVAIADSGVLPVDESEQ* # ORIGINAL: g11908.t1 original gene structure, not modified by PASA NODE_478_length_22867_cov_43.879 AUGUSTUS gene 7836 9983 . - . ID=g11908;Name=g11908.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS mRNA 7836 9983 . - . ID=g11908.t1;Parent=g11908;Name=g11908.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 8340 9983 . - . ID=g11908.t1.exon1;Parent=g11908.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 8340 9983 . - 0 ID=cds.g11908.t1;Parent=g11908.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 7836 8006 . - . ID=g11908.t1.exon2;Parent=g11908.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 7836 8006 . - 0 ID=cds.g11908.t1;Parent=g11908.t1 #PROT g11908.t1 g11908 MTQQRELFAVDSIFLEQQPRCGSTGNLLIRVDVSVDATVHSTVTPETVLRAFARVQHRHRVLRTVFERRSVADWLQIETNPLPIPHFTHLVAQDGDDFHRQASKLTLALLNHLWEEYEKRAGVGSGGASSPTHGEASAGPMRRYEVALGLVSASLSPASRDSAPPLNRTDDGKGHYSLLILLNHTAADMMSLKTVALELLDALFSSTTVDCASSAPSADPVARGSQSVQHQQDDVDRHYADYLPQFGPGLIRSLWKCRPEISRFNRAMTTIAKACPSSPIVNVDASLERCTIYSSRRISAEIFSALSRAANERGLTMHGPLCAGAIHAQLKQALSQDTLHLSQLKLERENMTNATAFVPVLPSIDLRRRLVLKSNDGRSAQLLSSDSVGSLSAVVTLDVPIRVSRNPADSDSNGENGNSNSNNNNNNNNNKSSSSSSSDNPTDKHIGCNTKPLSDHSDAKCRWMPVLDVDAFWATAVHVGRLQKEADVARPYLYLLSVLCRLGKMLVPSLVNKLAGTQPILIANVGKFEQKARCAGVEVEYAECLFSQVHMASSAAPYVLIIGLPDGTASVTMQAPAPFFTQDVLESQIDHFMTSLCGAADACS* # ORIGINAL: g11910.t1 original gene structure, not modified by PASA NODE_478_length_22867_cov_43.879 AUGUSTUS gene 15933 22447 . + . ID=g11910;Name=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS mRNA 15933 22447 . + . ID=g11910.t1;Parent=g11910;Name=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 15933 16057 . + . ID=g11910.t1.exon1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 15933 16057 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 16421 16555 . + . ID=g11910.t1.exon2;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 16421 16555 . + 1 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 16947 17379 . + . ID=g11910.t1.exon3;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 16947 17379 . + 1 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 17679 17732 . + . ID=g11910.t1.exon4;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 17679 17732 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 17974 18063 . + . ID=g11910.t1.exon5;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 17974 18063 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 18385 18498 . + . ID=g11910.t1.exon6;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 18385 18498 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 18610 18686 . + . ID=g11910.t1.exon7;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 18610 18686 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 19058 19133 . + . ID=g11910.t1.exon8;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 19058 19133 . + 1 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 19357 19488 . + . ID=g11910.t1.exon9;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 19357 19488 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 19907 20020 . + . ID=g11910.t1.exon10;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 19907 20020 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 20253 20308 . + . ID=g11910.t1.exon11;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 20253 20308 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 20628 20935 . + . ID=g11910.t1.exon12;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 20628 20935 . + 1 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 21071 21121 . + . ID=g11910.t1.exon13;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 21071 21121 . + 2 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 21632 21684 . + . ID=g11910.t1.exon14;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 21632 21684 . + 2 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 21975 22059 . + . ID=g11910.t1.exon15;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 21975 22059 . + 0 ID=cds.g11910.t1;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS exon 22329 22447 . + . ID=g11910.t1.exon16;Parent=g11910.t1 NODE_478_length_22867_cov_43.879 AUGUSTUS CDS 22329 22447 . + 2 ID=cds.g11910.t1;Parent=g11910.t1 #PROT g11910.t1 g11910 MIRQRLMRSQAVCCAACKSTLAGNVIEFGNSLFHPVCFKCGRCGDLIEDFGSQVMLANGLPACMTCTPNCAACGALVDETSVLLNDRHYHVLCLSCDTCGARPTAEAGQEVLVASTPGTTYTCASCLTAKGLPGGTSGVHITLTRTPSQPNIRPLSREHSLKGSSANGAAVGSPLASNAVEGETSADRSTDRMPSAGVTVATGGDVVAGKLNEDESRGQVAQAGVAPRQSQTRRISACGLDDEPVSPQEELDLVRMELADVKRNFTALVKSVKEYISAQAKAPGTPTEGNALNRSFSSGDTEDSLQSSESIETLRKQLFSERRTAEVMRTEVEKLKRRGSDIGSIASLDLVNRSDEIDRLKKEIAELKEESLRTKKELVDTKEALQLEAHKRALAENTVMRLTSEAGDLRKQLHSSLEDLRMYRNAASSAASESSANAPVRKSSEPSTRRQASLMAMHTSMSMDESVLRQPDETYSKSTKKTDKHPTHPSGHDHSDAHAPPTLMSRKSFTDAKQGRSSPITTIRKLSRMMTGFASGGAGSTVNVDAAGDEHGGLPVGHARSNSLSPNLKRKAGTAVDPRLSDGQDVIQGTSPPDDSGLLGVPHRFKLYSALKPSRCAYCGGLTWGGSKKALKCKGCGISCHSKCTQFVPPACGLRFARSTDALNDTSVITAAG* # PASA_UPDATE: g11905.t1, single gene model update, valid-1, status:[pasa:asmbl_7609,status:3], valid-1 NODE_478_length_22867_cov_43.879 . gene 1332 3268 . + . ID=g11905;Name=g11905.t1 NODE_478_length_22867_cov_43.879 . mRNA 1332 3268 . + . ID=g11905.t1;Parent=g11905;Name=g11905.t1 NODE_478_length_22867_cov_43.879 . five_prime_UTR 1332 1447 . + . ID=g11905.t1.utr5p1;Parent=g11905.t1 NODE_478_length_22867_cov_43.879 . exon 1332 3268 . + . ID=g11905.t1.exon1;Parent=g11905.t1 NODE_478_length_22867_cov_43.879 . CDS 1448 3094 . + 0 ID=cds.g11905.t1;Parent=g11905.t1 NODE_478_length_22867_cov_43.879 . three_prime_UTR 3095 3268 . + . ID=g11905.t1.utr3p1;Parent=g11905.t1 #PROT g11905.t1 g11905 MRVHPKHVVIVAAALLMLVVTKVIVDGMSPTERQVRERLQAGSRREGNENAHAHGEGNAHGDEQGHKDARVVDATKPHSGEDSLSEARKAAPVVVNAMDVDANGLPADDGEEKEDDLDPQDVDGAQDAQAGLHGTDRDRFKLRLVDKVIDAKRRRGSAPIVKPKKSLIVGIPTVKRPKQSYLLGTLHSLVNGMSETEKERTVLSIYVSELEDAAFVNEVTEKVRLEFPREFETGLIEVFGPDLSFYPPLTGLKEKYGDSEMRIKWRCKQVVDYAFMMDRLYNRADYYLQLEDDVITVSGWVSQVENFIKLQDTCSDNGNSHSPSYTCRRNWIMLHYCQLGAIGILFRNRDMPFVTGFYMLTFEEQPVDWLNDRIIEITDQRRPVRLSPSLFQHMGKISSLPGKVQELLDYTFRDTTQESPSKNPPATVETSLTPYSGFDAATPYVKIGGRFWALAPNAGDFYAIKFKDPLQLNRVIFEPCEGLPSDVFVHANIEAIIGGAGAGKHSLGTFDRGRLDTRPSLSNVKEIRITVEHPQKTWVCIGKIAINS* # PASA_UPDATE: g11909.t1, single gene model update, valid-1, status:[pasa:asmbl_7606,status:3], valid-1 NODE_478_length_22867_cov_43.879 . gene 10620 15081 . + . ID=g11909;Name=g11909.t1 NODE_478_length_22867_cov_43.879 . mRNA 10620 15081 . + . ID=g11909.t1;Parent=g11909;Name=g11909.t1 NODE_478_length_22867_cov_43.879 . five_prime_UTR 10620 10645 . + . ID=g11909.t1.utr5p1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 10620 10933 . + . ID=g11909.t1.exon1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 10646 10933 . + 0 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 11182 11334 . + . ID=g11909.t1.exon2;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 11182 11334 . + 0 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 11494 11679 . + . ID=g11909.t1.exon3;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 11494 11679 . + 0 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 11859 11989 . + . ID=g11909.t1.exon4;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 11859 11989 . + 0 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 12162 12263 . + . ID=g11909.t1.exon5;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 12162 12263 . + 1 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 12577 12727 . + . ID=g11909.t1.exon6;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 12577 12727 . + 1 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 12970 13057 . + . ID=g11909.t1.exon7;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 12970 13057 . + 0 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 13378 13491 . + . ID=g11909.t1.exon8;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 13378 13491 . + 2 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 13737 13952 . + . ID=g11909.t1.exon9;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 13737 13952 . + 2 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . exon 14430 15081 . + . ID=g11909.t1.exon10;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . CDS 14430 14668 . + 2 ID=cds.g11909.t1;Parent=g11909.t1 NODE_478_length_22867_cov_43.879 . three_prime_UTR 14669 15081 . + . ID=g11909.t1.utr3p1;Parent=g11909.t1 #PROT g11909.t1 g11909 MRLLRRVASSFLRLSSASPNLPRLYSATPSRLWSGSTHCTSRFGHTTHFKKMTSCGSNGVCSSEHAHERQYHAVPTDSFFSMGLDTHKVPMSIHAHNRSSLLGRMKEKASHSMGLSLNSIVLLVGGTTQHQYDTDRELRFRQESHFMYLFGCADPDCYGAIDLSTGESILFVPRLPEEYAVWEGVIHPLEHYKEKYAVDRAEYTDNIEKFVTERKPDAVHVLRGVNSDSGAKTIEATFPGMDKFNIDGSFLYSEICECRVFKSPEELEILRYVSRISSEAHKAVMRSVRPGMMEYQMESQFLHETYSRGGCRFMAYTCICGSGKSGATLHYGHNNKQIAENDMLLLDMGAEYHGYTSDITCSYPATGKFSADQRDVYETVLAAQLAVMKAMKPGVPWPAMHRLAERVICEELLKRGFLQGSIDDLIGLHVGATFMPHGLGHLMGMDVHDVGGYPNGTSRIQEPGINRLRTSRILQPGMVITVEPGVYFIDCLLDAAKKDAARTHLFCWDKIERFRGFGGVRLEDDVLVTADGIENLTQCPRTVDEVEAEMAKGCQ* # PASA_UPDATE: g11906.t1, single gene model update, valid-1, status:[pasa:asmbl_7611,status:12], valid-1 NODE_478_length_22867_cov_43.879 . gene 3467 4833 . - . ID=g11906;Name=g11906.t1 NODE_478_length_22867_cov_43.879 . mRNA 3467 4833 . - . ID=g11906.t1;Parent=g11906;Name=g11906.t1 NODE_478_length_22867_cov_43.879 . five_prime_UTR 4766 4833 . - . ID=g11906.t1.utr5p1;Parent=g11906.t1 NODE_478_length_22867_cov_43.879 . five_prime_UTR 4511 4513 . - . ID=g11906.t1.utr5p2;Parent=g11906.t1 NODE_478_length_22867_cov_43.879 . exon 4766 4833 . - . ID=g11906.t1.exon1;Parent=g11906.t1 NODE_478_length_22867_cov_43.879 . exon 3467 4513 . - . ID=g11906.t1.exon2;Parent=g11906.t1 NODE_478_length_22867_cov_43.879 . CDS 3626 4510 . - 0 ID=cds.g11906.t1;Parent=g11906.t1 NODE_478_length_22867_cov_43.879 . three_prime_UTR 3467 3625 . - . ID=g11906.t1.utr3p1;Parent=g11906.t1 #PROT g11906.t1 g11906 MADAADGDRRGRGRGGFGRGGDRRGGDAEGERGRGRGRGGDRGRGRGRGGNRGGKDEEKEWVPVTKLGRLVKDGKIKQLETIYLFSLPIKEYQILDYFLGSKLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSDGHIGLGVKCSKEVATAIRGAIILAKLAVVPIRRGYWGNKLGAPHTVPMKVTGKCGSVMVRLIPAPRGTGLVAAPVPKKLLTMAGVHDCYTCSRGCTKTMGNFAKATFEALNHTFTYLEPTMWRDTRPGKIPYQEFTDYLSKAHVHKASRAAHYAAPQDA* # PASA_UPDATE: g11907.t1, single gene model update, valid-1, status:[pasa:asmbl_7610,status:12], valid-1 NODE_478_length_22867_cov_43.879 . gene 5459 7621 . + . ID=g11907;Name=g11907.t1 NODE_478_length_22867_cov_43.879 . mRNA 5459 7621 . + . ID=g11907.t1;Parent=g11907;Name=g11907.t1 NODE_478_length_22867_cov_43.879 . exon 5459 7621 . + . ID=g11907.t1.exon1;Parent=g11907.t1 NODE_478_length_22867_cov_43.879 . CDS 5459 7396 . + 0 ID=cds.g11907.t1;Parent=g11907.t1 NODE_478_length_22867_cov_43.879 . three_prime_UTR 7397 7621 . + . ID=g11907.t1.utr3p1;Parent=g11907.t1 #PROT g11907.t1 g11907 MEEGPFNQGRAYARRAEDLASAGRLQEAIEFHVKAAEEFLKATQESSSPDTVKILRLHNLNHTKRAADLTLRMRQQQQQQQLLQQQQQQQQQQQQQQQQPQLHQQQTREQYHQAAAPPKQAASPQQQRHLGSANPSPSTHNHTSSNAHTAKHTGSRQGQSTSTAPASSAAGATDHVRSHPKGQSAPQTARPQAPAHVINFPPPEMDDDDLFQGFWDAIDRLIKKIPNPFANTGSNVKGRHYTPADRRRDSHGAGGSGGAIAAVDGSFFIVPSAQEKGKEGSAAVAKLQQQQHQQQQQQHASVSDARQAAIDAGDREAMRAEIASLREQVRRLTEENERMRSVDLENDSLKHSVVQFKRDVLQQAVRYKQERELRQSMSMSRSAMLASALNNNINTHGSIARSSNAFLAGGGVSDPRTIGQSPLSAASSGPQAAQQQQQQQPLQPQSPLAGAPPSFMSSAQLQQQQQNAGTASDSQLRRVIAENEKLKSELEKHRLRWESLKASAKKKRDPVPASSSDIGLSTATTGGGGSAPANGHHYMSTHTSHAGINTGGDVGGGVSLHTAASASSHVLHHARYTVPLANESVNGAGTVGGDFDLRMGQSAASDMFMSAYTDIGSAQSMYRPPQDVLDLLARSRESLNSQNAS* # PASA_UPDATE: g10320.t1, single gene model update, valid-1, status:[pasa:asmbl_4527,status:12], valid-1 NODE_2544_length_5951_cov_39.6695 . gene 514 5879 . + . ID=g10320;Name=g10320.t1 NODE_2544_length_5951_cov_39.6695 . mRNA 514 5879 . + . ID=g10320.t1;Parent=g10320;Name=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 514 993 . + . ID=g10320.t1.exon1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 514 993 . + 0 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 1252 1365 . + . ID=g10320.t1.exon2;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 1252 1365 . + 0 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 1785 1963 . + . ID=g10320.t1.exon3;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 1785 1963 . + 0 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 2117 2794 . + . ID=g10320.t1.exon4;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 2117 2794 . + 1 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 2990 3133 . + . ID=g10320.t1.exon5;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 2990 3133 . + 1 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 3353 3658 . + . ID=g10320.t1.exon6;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 3353 3658 . + 1 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 3831 3933 . + . ID=g10320.t1.exon7;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 3831 3933 . + 1 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 4156 5046 . + . ID=g10320.t1.exon8;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 4156 5046 . + 0 ID=cds.g10320.t1;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . exon 5397 5879 . + . ID=g10320.t1.exon9;Parent=g10320.t1 NODE_2544_length_5951_cov_39.6695 . CDS 5397 5879 . + 0 ID=cds.g10320.t1;Parent=g10320.t1 #PROT g10320.t1 g10320 MEDYFDETFSSVYSADVDGRSSEKRSILTWLKQGLFGVLFTIVKDSALPAFVVIFEIIVDLLQVLAFPFSHRFEFPWNHAATQWFVTLCSIFTPEVYVVSTRGWFFAALGLVGLVLVDVLYVGYSFSRKSYRMMWTIKILRAFGGLFSTILFIPLLGLLTGQLSCDVAEAHGDICGSGIDLLYKILAAVVSVLFIFLADPKSKDVLARPHGRVDVFYLTVRTVLTILMNAMPVSSTSRWIFTIVCVVGSCSSALLHTWYIPYYRFGYAKLKNATQWIFAYASLALVLAMARNNPDASEASILFFLGVPIVIPLSIFSIQARRRMIIERRVRACKDPYEVELKIRFALENESLLRATNEEDDNDEKSEAELASRMASLRSINTLYAEAVKRRPKSSLLHVFWGHFYLFYLDNSNMALTELSNAEELEPLVDEQFLIYRRQLTLSEAASQSAGAGGVDVIAYIQYQKYLADATKFDKRVSASRGAFWTELARAQPNMAKLHHLGSLISAALSAAQENYLHLIKLGSNSPQVLRMYASFLIDVMNDSAQGQELVAKAEALEDARTRVGENEDSEVAFDDSNPTITISGAKRKEGMVLEANLAACRLLGYKRTDLVGKNINMIIVKNIALHHNRILSTYLSSGVSTMLDRKRNVVALHSNGYIVPANIVIRQALDPQGFTCFIGVMRPIVSQDHYVVTDPNGIILSCTSGCAALFDSNIDEIEREGFHISHWIADTDQIPPTTSTGSTGKEKAPKPHVIRQRIGPEGVEYDLAVSIDRLQTAGDYVDIIRFKATPVTSMSADLSELPSGGDVGVFPDLDARIPSLDAALERVASPHPLLVSAEPVPAQRDPRDSRDQRGHRKRLLKPVSFGELRDRSNDSSRMASVENVCDSSAHSSDEHDSGREDEGGDYNGYFPGAMPGASGHSPSGNGGNSCDKDNRLRQIPSVRFAGSGAGNNDDYATGNIRLEQVEMQDLNSSMASRAFVPLDANRRDDHKSPKYGSSGDLIGGAKSKTPGTAGSISASSAAGYESMRQRTRNLIAEKGAKPASETLRLKYGFLFSCIVIIAFAIAAIVVLRMTTFQYTETVDCVFEGGTRRFKAVTIARNVRTLVLSAANVSCPSQWAFVDVL* # PASA_UPDATE: g12731.t1, single gene model update, valid-1, status:[pasa:asmbl_6413,status:12], valid-1 NODE_3693_length_2942_cov_42.1929 . gene 731 2532 . - . ID=g12731;Name=g12731.t1 NODE_3693_length_2942_cov_42.1929 . mRNA 731 2532 . - . ID=g12731.t1;Parent=g12731;Name=g12731.t1 NODE_3693_length_2942_cov_42.1929 . exon 2383 2532 . - . ID=g12731.t1.exon1;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . CDS 2383 2532 . - 0 ID=cds.g12731.t1;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . exon 1944 2231 . - . ID=g12731.t1.exon2;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . CDS 1944 2231 . - 0 ID=cds.g12731.t1;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . exon 1474 1698 . - . ID=g12731.t1.exon3;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . CDS 1474 1698 . - 0 ID=cds.g12731.t1;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . exon 731 1340 . - . ID=g12731.t1.exon4;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . CDS 807 1340 . - 0 ID=cds.g12731.t1;Parent=g12731.t1 NODE_3693_length_2942_cov_42.1929 . three_prime_UTR 731 806 . - . ID=g12731.t1.utr3p1;Parent=g12731.t1 #PROT g12731.t1 g12731 MHISLGRVFAIESTPSVPAIAENSDPAALKRFAVEAEVHGKLALAAKYYQERVARNKSNASNWFDYGAFCLRCGDNAKAEECLKEALSINQSHFNSLLLYGAIQCGNERMDVAETFFRAAVDTDPKSGLGLTMLGLYDDLVERDVEAERAFADAARIEMAGHNHGGIPEQLQEDTSPSIFMRAANFLLDCGASPLAERALAHELLANGTSPKYHLALARLQLMARDFRAAEASARACVGPDGLDTEATALLGHVQYIRGDYSDAMVTYERLLGMSRAPTDLYAVYLRLADAYVRNGEYERAKDIYLRACKDAPSSGTWLGVGVACLELGDLRQAEDALSEANVLNNGDPDVWGYLALLCKRGDRRFEAERAFHHAVKLNLSNACVRSEVETYLKASSS* # ORIGINAL: g2436.t1 original gene structure, not modified by PASA NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS gene 2436 3152 . + . ID=g2436;Name=g2436.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS mRNA 2436 3152 . + . ID=g2436.t1;Parent=g2436;Name=g2436.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS exon 2436 3152 . + . ID=g2436.t1.exon1;Parent=g2436.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS CDS 2436 3152 . + 0 ID=cds.g2436.t1;Parent=g2436.t1 #PROT g2436.t1 g2436 MSKLRTCCLVCGEESNAHVLAIVNGKGRQLTVCPAHNSNAKVKTFLAKTERISFFDWTTLRSPENYNVPGDRKALIRAISPFVTSVVSYMADGWDKWRTVHLDSFAEANKLVCHVDSTCELNVYDELDEGVATRSVEAMARLEVGEKLWLITETGEIQPHSHSYMAGSIRWYSLQSISTQIEALHRLLVHTKYYSANRDWEGKVRHGLETLATTYEQLNRVEDAEAIRRVTPPHDSFQ* # ORIGINAL: g2437.t1 original gene structure, not modified by PASA NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS gene 4085 7315 . + . ID=g2437;Name=g2437.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS mRNA 4085 7315 . + . ID=g2437.t1;Parent=g2437;Name=g2437.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS exon 4085 7315 . + . ID=g2437.t1.exon1;Parent=g2437.t1 NODE_2198_length_7315_cov_33.4503_potentialcontaminant AUGUSTUS CDS 4085 7315 . + 0 ID=cds.g2437.t1;Parent=g2437.t1 #PROT g2437.t1 g2437 MLKDTIAASLRKVELAVQSVLARSSAHTQSPELSALLRQIQQSVEPLGRSERDIVARIDAIGPLVAASLQPLNLLARIDSSIGRMNDVLANAQPANTGVVARIDRMDTAVRDVIGRLNSVGADVQQIKRLAESMAAGGNPNAAALAQILSIVSRLGQKTDGLVQADRDFIVQQLNALRQDTAAAINSVKEIVAQPVSSPAATAPIDLTSVFTRLDEHARAVNATMQSLQTMFEPKFADLKQHVTDVVKTSISALHQDILNANRERVEQRKNATAQLEAKNARIAEAEAQLVAQKQILADILSEVRGLAAVRPTSVANPSNPTSQLAEQIAAMQQAVGQLVAREDRATQGIQDVAREQAVLQRAIADLKTSLASSTTSGELAAIREAIANMHRPDGATAGIKSILDRINQLEAGRAAAVVTAGASASEVERIIQTGLNNIALPSAMSRLEQLLRQILAKPNGDNNQSESINAKAAEILAAVSLPRQTVPVTPAVQPALDELKTLLQQSTDHSDVLRAIEASRSQIAQLEALVNSNVATIVGAIKSGGVSDLHQLINAKASEIIAAANGRVVTSDVASGVVAAIAQLQASTAAGQQLLQNALSEIAGIKSALAARSQNPPVVSSAIMQRLDTLQRFIVENNQGNVTQPNAVVPGLNALAAEVGQLRQALLSGNNTAQLNEIAAELKRTPDLNQRLDRLEEAVRRMVTPHTDDAIKRIEEKINSLAGPTPAIVAGIDDLVRQMETVKALAQQAAQHPQAPASMWGDDAAPTAVVVQQEEGGRVLNRVLLEELRRLSTTVSTAFTSVENKLATILTERQAIEETLKLLQKDSAETKETLATILSKLGELNDKSKNVDGANEVLASVNALRDELAEARGLMKESLGEIVANAVEAAMAKALEEFKRGDRMQDLFDQQRKAMVDELAATRDALVNAVQSNQTELREKLIETKEYIKKTTTKVREAQQQDAEIASRALACPTGEQLKQVLAQLEQNAQALGRLSKERDDAIEEFRRIKTEYTKQKEVRMLEQAEREHADEERERENQRERENQRERENQREREERDREERDSEDQKDPREREDQ # ORIGINAL: g4190.t1 original gene structure, not modified by PASA NODE_412_length_24328_cov_44.2182 AUGUSTUS gene 23478 23993 . - . ID=g4190;Name=g4190.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS mRNA 23478 23993 . - . ID=g4190.t1;Parent=g4190;Name=g4190.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 23478 23993 . - . ID=g4190.t1.exon1;Parent=g4190.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 23478 23993 . - 0 ID=cds.g4190.t1;Parent=g4190.t1 #PROT g4190.t1 g4190 MVVVVPTDPGAAVVGGAVRYGLAPERILSHIMRYTYGVAISVPYDEQKHIGRRVRTYAGRAFCDDCFSPIVNLGQSVAVNEEISESYAVASAGATSVEVRFYATQNPNAPYIDDPSVEWLATLEIPMAGVGLDRGIAVHMFFGDSEIKVRVVDRRDVAIEKSCKLDYLGTH* # ORIGINAL: g4188.t1 original gene structure, not modified by PASA NODE_412_length_24328_cov_44.2182 AUGUSTUS gene 15382 15861 . - . ID=g4188;Name=g4188.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS mRNA 15382 15861 . - . ID=g4188.t1;Parent=g4188;Name=g4188.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 15382 15861 . - . ID=g4188.t1.exon1;Parent=g4188.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 15382 15861 . - 0 ID=cds.g4188.t1;Parent=g4188.t1 #PROT g4188.t1 g4188 MTDKSAPQSYASEESRLMGNADSNTMRSQRDAWTINRRSRFFKDGSNMIDEMSFVYYYHSSPPNQALHLTTTLCLFLGIFCLLAFPDPLRPHGVPVLSIAFAAAYILYYFYLHPPVAVAFASAFAGLLYVSSLVASHTDAYPNALYIAAASIICAALQG* # ORIGINAL: g4186.t1 original gene structure, not modified by PASA NODE_412_length_24328_cov_44.2182 AUGUSTUS gene 5091 5912 . - . ID=g4186;Name=g4186.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS mRNA 5091 5912 . - . ID=g4186.t1;Parent=g4186;Name=g4186.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 5091 5912 . - . ID=g4186.t1.exon1;Parent=g4186.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 5091 5912 . - 0 ID=cds.g4186.t1;Parent=g4186.t1 #PROT g4186.t1 g4186 MAARKAIIVGAIVSIPALGYALNRHLERRFPRVSAAEVPSFLSRVHPQWARPGLPMNWEDAFYVDVPIELVARHAQPGTATLSGGFPTPAQAFTKAFFSSRLILMERKVLLFARDKLGLLSNVRAAGPLRTPGLAGPDYKVGDALIEGAFHVESVVGLSGTSTSGPIAVSFEMPAATQRPGGLAGGRHVFAVESLSDGATARMWFVSHSSIMPPVGELVETPAPWWSPSRDAIPRPATKDGQRVPLSMMIGLRVHGVYSRLLMASAIRVLEGH* # ORIGINAL: g4187.t1 original gene structure, not modified by PASA NODE_412_length_24328_cov_44.2182 AUGUSTUS gene 7278 14655 . + . ID=g4187;Name=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS mRNA 7278 14655 . + . ID=g4187.t1;Parent=g4187;Name=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 7278 8162 . + . ID=g4187.t1.exon1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 7278 8162 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 8467 8620 . + . ID=g4187.t1.exon2;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 8467 8620 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 8910 9232 . + . ID=g4187.t1.exon3;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 8910 9232 . + 2 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 9474 9557 . + . ID=g4187.t1.exon4;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 9474 9557 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 9781 9911 . + . ID=g4187.t1.exon5;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 9781 9911 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 10095 10899 . + . ID=g4187.t1.exon6;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 10095 10899 . + 1 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 11067 11342 . + . ID=g4187.t1.exon7;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 11067 11342 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 11606 12741 . + . ID=g4187.t1.exon8;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 11606 12741 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 13054 13250 . + . ID=g4187.t1.exon9;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 13054 13250 . + 1 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 13400 13563 . + . ID=g4187.t1.exon10;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 13400 13563 . + 2 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 13929 14071 . + . ID=g4187.t1.exon11;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 13929 14071 . + 0 ID=cds.g4187.t1;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 14292 14655 . + . ID=g4187.t1.exon12;Parent=g4187.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 14292 14655 . + 1 ID=cds.g4187.t1;Parent=g4187.t1 #PROT g4187.t1 g4187 MDGSDRADVVDESQASNAAPTGAGVGPPAHLVPELLPISDDQPTNPDVAHPQTTKPESRDGKSARVSQFHSFSERVRGAHPVVTGEDVGDAYTIQRTEFDPVTLARRRAYSWDVRTGLHPRELHRRATIGDTSHGIIEGEHTPQITTADTTRHVPVRYQELSLRLDRSLRPHDQKPASTAEEAIDRLKKAKEAKEYDVTEHLLAIGDLAAIIDTDINVDDPKRSKGLTSDEAARRLQLHGRNKLTPPKRLPEIVILLLKFLNPFMILLEVAAVLGFVAYAIEPGETSNLYLGIVLVVIITGTSLMAYYQERKSSDVMKGFAALFPQKCKVIRDGREDVIDSELIVVGDKVPADIRVLSCSDFMVDNSSMSGECEPQPRAVDFTDHNPLETQNLAFYSTLAVDGRAIGVAVRTGDNTLIGRIAALAANQPAEVTTLQHEVNRFVKFITVVALAFGVLFFVLGLVRGMDVIPNLISTIGIIVANIPEGLPATVTVCLTLVARRLASKNVFVKKLESVETLGSTTVIVSDKTGTLTQNKMTVVHSFYDGETHDAIESTDAATTFTPMDIGGHPSCQAIIRVATICSRAVFAPPVDPSENEKKKQARAAKAAATAGTAAETAQRRPWWRRCCKRSGDPEVDIGMGVGVGKAHATEPSYVGGPGPAMEEEEEATHVDVPVGSGTRTEKAKLDIIGDASEKALLRLAEAHVDTDAVRERFPKLFEVPFNSKNKYQLSIHHYEPLLSGGAFDVTGLLDGETPPATRHLIVFKGAPEIVLERCVSHLHEGKEMPLDADAKKGILDAVEELAAMGERVLALANLWFVPGPSGDETVYKTEEGNYPTHGYVLAGLLSLKDPPRLGVPDAIATCRQAGVKIIMATGDHPLTGASIAKAIGLVTLPLSDIYTRPEGPPPLPKNYVRLKYNMTAAKLTRKEKKEKKKRDSQSAPGAVDSPSAEVDERRGWRGLWAAIVRGTRHTPPTPLPTRRMDVEAGIDETDVTDASESVAPDVPPPPPSSVAGGNDDVEEGDVGDSQGVTQTIAVDTRAPDDRNATFDSAGDARPRDAQQVELHVTEGTDGAHVETALQGQPSGVPLADDGLSRDDETVAVEGTSDAPIPAYMQSVDVHTTTTGPHTDDTGTFTLVRSIPRRASVAVVFDRPSNTVNRSGPESILPAATVGGGGAGRYDHGYVAKTSGAYPTEDMLRLLPLELRCAIVITGPTLLKMSDDQLDYALRAPEVVFARTSPQQKHRIVESLQRLGHVVAVTGDGVNDSPALKKADIGIAMGIGGSEVAKEAADIILTDDSFVSITFGILEGRLVFDNLRKSIAYTLSHLLPEANPSTISSFLRMYTTLQLVPFILAVALGFPPGLSAILILGIDLLTEMAPAISLAYEMGILESIPAVLLYLYVMNAHGFPPNSLLNQIDHFQKGGGAIIVDGNIKSETDQLNALNEAQSAWFMVIVTTQMVNLFACKTRESSLFQHGMFRNMRTLYGIMIAGVIMVLIIFVPFLNTVFSTRMITPAWVWLFILPYLVFLFAWAELRKWIIRRQRGQGLFCRLFFW* # PASA_UPDATE: g4189.t1, single gene model update, valid-1, status:[pasa:asmbl_7004,status:3], valid-1 NODE_412_length_24328_cov_44.2182 . gene 16276 22758 . + . ID=g4189;Name=g4189.t1 NODE_412_length_24328_cov_44.2182 . mRNA 16276 22758 . + . ID=g4189.t1;Parent=g4189;Name=g4189.t1 NODE_412_length_24328_cov_44.2182 . five_prime_UTR 16276 16481 . + . ID=g4189.t1.utr5p1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 16276 18443 . + . ID=g4189.t1.exon1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 16482 18443 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 18657 18830 . + . ID=g4189.t1.exon2;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 18657 18830 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 19146 19343 . + . ID=g4189.t1.exon3;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 19146 19343 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 19633 19950 . + . ID=g4189.t1.exon4;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 19633 19950 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 20117 20252 . + . ID=g4189.t1.exon5;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 20117 20252 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 20398 20790 . + . ID=g4189.t1.exon6;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 20398 20790 . + 2 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 20923 21209 . + . ID=g4189.t1.exon7;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 20923 21209 . + 2 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 21400 21527 . + . ID=g4189.t1.exon8;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 21400 21527 . + 0 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 21806 21892 . + . ID=g4189.t1.exon9;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 21806 21892 . + 1 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 22075 22170 . + . ID=g4189.t1.exon10;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 22075 22170 . + 1 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . exon 22321 22758 . + . ID=g4189.t1.exon11;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . CDS 22321 22498 . + 1 ID=cds.g4189.t1;Parent=g4189.t1 NODE_412_length_24328_cov_44.2182 . three_prime_UTR 22499 22758 . + . ID=g4189.t1.utr3p1;Parent=g4189.t1 #PROT g4189.t1 g4189 MSAPLEADGGAPFVDLSQLDPVEQARIRAMVAERMYLDLMKKYEVMNAKLVEAGGAQMPPAMPLPMEDMGLEGLNLGRNFAARNALPAQSDPSVSSAPFTAPESATVQRQSIDQGTNPRVALESPYATAGEVMAQVKPTLPATESPYAKPFAHAISASSSATGAAFATKQPSEAAPAAVRADDIPDSSMQSAQPNAAASGPPSSTSAPSTRSSGEFGSSRRMSLSVADARKSPVPQLRRHSHSVPAGTAVPDVGRLSPTPSVRRESLAASSSSSMNNDPHARPPISPRPVASSRDSSDYDTSDEEHYVPISSPRKTSVESTAGHPGGAGAVDASPRISPQELPIVSPRRESVGVSASVSPSSMRRPSSNDTHALTHQPASTSPSLRRVSLDGPGSYAAQRRGSSPTAVQLSSTGLAQQQVPSTPRGDRSTSDTPPPPSIIGVRSPGDALPAPPPSRSQLAPTYEADVPPVTSPRPVMLSAHDQQLLQQMNGDFYATAVPAATIKAAGNGIGYTSSSTQHSHAHLSHAISVPVGVPVEKLHGKRMFRSNSDPNVADEDDGLGALPTSTSREKETRRVSMELLFNRPRQTRQLTPVAPKRTVQSLPSSASYVPSPMRKEAVHNRRGKLIKSWVERVLELNRESLTVLIEKKKGVLEPEFAIDLDEISQVATCEEDTYDSCFFVFVAGKSRTFRTSTKENARLWVESIATLGLNKAVRSASNLGRLSLFLDQGALVNAIDCVENIPMVAQAVASNHLQEAHILINRGAHAHYLVRDNFLSKVPFDRVFSFMMANTKIDPNIVSNDDIGNTLMHVAARLGKTEAVMELLRRRVEVNHPNRLGDAPLHVAIKCDMRPVAIAVLRSGLADVNVPAKDGNLPIHLALMRNQEDVVKELETRGADINKPDSEKYPPVHYALKSANVPMATFFVNRGADVDAVNGDGDQPLHVALRAGPQFVALCGTLVNKGASLHVTDHHGRTPFHYAMEAGKGAQQLIRRMAEIDTALGGVGINVPDRRGETALMMAARQRDAGLFQYLLEHRANPNMQNDRGETAVHVIIDSRVENKAASASEEAAVCELISACVKEGLDLSLRTKETGDSLLHLTVKHGLVGVARHLLSLHPALLSQQNVANNQPLHLAAFFGSVSMMELLLSAGADRDALNGRHETPLHMAVRGQQLPMTEYLLSIGCNPHHWDCNGNFPLHSAIEFNLVDFVRHFIAYGVDINARTESFLTPLMLAVDNDAPNIVSLLLVAGANATHRMPGNRYTCLHHAVSRTLSACAQAIVLKSNGKIALLVDKDGKTALDICRDPSVSSLLRMAISQA* # ORIGINAL: g4185.t1 original gene structure, not modified by PASA NODE_412_length_24328_cov_44.2182 AUGUSTUS gene 628 4607 . + . ID=g4185;Name=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS mRNA 628 4607 . + . ID=g4185.t1;Parent=g4185;Name=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 628 1700 . + . ID=g4185.t1.exon1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 628 1700 . + 0 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 1810 1963 . + . ID=g4185.t1.exon2;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 1810 1963 . + 1 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 2060 2788 . + . ID=g4185.t1.exon3;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 2060 2788 . + 0 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 2897 3020 . + . ID=g4185.t1.exon4;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 2897 3020 . + 0 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 3196 3364 . + . ID=g4185.t1.exon5;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 3196 3364 . + 2 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 3473 3666 . + . ID=g4185.t1.exon6;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 3473 3666 . + 1 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 3811 3947 . + . ID=g4185.t1.exon7;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 3811 3947 . + 2 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 4054 4141 . + . ID=g4185.t1.exon8;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 4054 4141 . + 0 ID=cds.g4185.t1;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS exon 4273 4607 . + . ID=g4185.t1.exon9;Parent=g4185.t1 NODE_412_length_24328_cov_44.2182 AUGUSTUS CDS 4273 4607 . + 2 ID=cds.g4185.t1;Parent=g4185.t1 #PROT g4185.t1 g4185 MSRPSRKRSFVEADLSDDDADSNVEDGAYDTADEDALDSLITDESGEDDESDPLASDEDLVDTQSEIVADATVAQKLTGRMNTARQDATGKAPDSRTTIDNLADELMNESMMPAAEDLTDDSESDTEAQQLPAADKGKRPARDTHMHLTDLHLLDEEEQDTPITAAELAHDMHLFMQNRRKVKGSRAGMKMRDYATADVRRLMGEANQLFGATSADQRDERIEALCMEVIKLSPTNPDPYLTLSTLYRDKNDTLKALKYTLFAAHLDTKNRGLWQDAANLSYKEGMYEQAIYCYDRAYNCDPANKDYGSLYGRALVQTMRGRNAQALTAFRTVAEAVKNDDQVLYNMARAKAAEVDKLIKAQKDAERAERYLSKAPTELTEAQIEERVVRSMSSQLYAKAIEFVSNKWKGDPASMSLSLRTRLGVCYLRLNKVEEAKKSFAPLFESMMGHGSEEHLNLYMDVIRLFFTKRHYRDVLTMIQHLLPEQNPTLDENLRAEVANINALCILHEKNAVESQAALQAARASIRKKTPGTSTMSIAMATHMSTCYREHGLVDMAKTVVTLLSREPQIAGVTERLGVLVESALIAFEERDYEKFLATSLVVLRRVLGGYTRSWRPTDGQGLGWSLRDPENAYAPRREPLDAATQLELLRKTCSVLLQRGQHNDGLRAIDLLRVALRYCEPNQKAQLRLLLADASWRVGDVETAMNNIRKCFGTFTHQGSRHANEQQALDAVDVLSVLNAAQGRRALSAVYANEFESIRKFIAREMDLRKMKGRSKAPVDEESLSDALRAEHTALRLIHGHHFLFAGSFKRAYNDYLRVYKAMSDAGTLTPLLPLLVGVSQLQRVTSRRAEACHFDAVQSFGFLHEYFTIRKIGQETHYNMARALHQLGIRYLAVPYYEKVFDFPSPLQEAMGWEKVRASENIVRNAVDLQMLPIARIVSQNPFANDQHLCDRSFRFQTEAIEDDTDLRREAAYNLCLIYRASGQHTLARDLTWKYLSV* # ORIGINAL: g12700.t1 original gene structure, not modified by PASA NODE_2051_length_7920_cov_38.4945 AUGUSTUS gene 7037 7674 . + . ID=g12700;Name=g12700.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS mRNA 7037 7674 . + . ID=g12700.t1;Parent=g12700;Name=g12700.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 7037 7163 . + . ID=g12700.t1.exon1;Parent=g12700.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 7037 7163 . + 0 ID=cds.g12700.t1;Parent=g12700.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 7430 7674 . + . ID=g12700.t1.exon2;Parent=g12700.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 7430 7674 . + 2 ID=cds.g12700.t1;Parent=g12700.t1 #PROT g12700.t1 g12700 MEEPSMLVRRLAGKRLSAQVKQLDLFPKVQPECTETTSTGGTVLVFAEIVAFQPHTTSYEYFVDPKIDELMTLNVDMTIPMSCDHLGADVLDVSSMSASLGDNALKQEPAHYGLTDKQLKWIK* # PASA_UPDATE: g12699.t1, single gene model update, valid-1, status:[pasa:asmbl_3377,status:3], valid-1 NODE_2051_length_7920_cov_38.4945 . gene 5100 6514 . + . ID=g12699;Name=g12699.t1 NODE_2051_length_7920_cov_38.4945 . mRNA 5100 6514 . + . ID=g12699.t1;Parent=g12699;Name=g12699.t1 NODE_2051_length_7920_cov_38.4945 . five_prime_UTR 5100 5206 . + . ID=g12699.t1.utr5p1;Parent=g12699.t1 NODE_2051_length_7920_cov_38.4945 . exon 5100 5360 . + . ID=g12699.t1.exon1;Parent=g12699.t1 NODE_2051_length_7920_cov_38.4945 . CDS 5207 5360 . + 0 ID=cds.g12699.t1;Parent=g12699.t1 NODE_2051_length_7920_cov_38.4945 . exon 5494 6514 . + . ID=g12699.t1.exon2;Parent=g12699.t1 NODE_2051_length_7920_cov_38.4945 . CDS 5494 6269 . + 2 ID=cds.g12699.t1;Parent=g12699.t1 NODE_2051_length_7920_cov_38.4945 . three_prime_UTR 6270 6514 . + . ID=g12699.t1.utr3p1;Parent=g12699.t1 #PROT g12699.t1 g12699 MPSLSAVVGSAQHVLLVGSPAAPADGIAAALTDLRGAISDVVFEQVDRIVAAKLPAASFDAVVSGYIAPAAFTHSSDVLEEFARLLKPSGSVFIREPVVEDGKSVSHGGVAVRTAQQLASAIKLAGLIDTVATVGGEDVAAVAAFWKTSEISGVSIGQASAKKPSYEVGATAKLSFGIKKPAAPAAATEKIWRINATDFGDDDADLVADDDSLLDASDRAKPTAESLKAKTADDCEVGPGGKKRACKDCTCGRAEEEAQGFIKEEAKSSCGSCYLGDAFRCSTCPYLGMPAFKPGEKIVLSDRQLKADA* # PASA_UPDATE: g12697.t1, single gene model update, valid-1, status:[pasa:asmbl_3376,status:12], valid-1 NODE_2051_length_7920_cov_38.4945 . gene 331 1723 . + . ID=g12697;Name=g12697.t1 NODE_2051_length_7920_cov_38.4945 . mRNA 331 1723 . + . ID=g12697.t1;Parent=g12697;Name=g12697.t1 NODE_2051_length_7920_cov_38.4945 . exon 331 577 . + . ID=g12697.t1.exon1;Parent=g12697.t1 NODE_2051_length_7920_cov_38.4945 . CDS 331 577 . + 0 ID=cds.g12697.t1;Parent=g12697.t1;5_prime_partial=true NODE_2051_length_7920_cov_38.4945 . exon 817 932 . + . ID=g12697.t1.exon2;Parent=g12697.t1 NODE_2051_length_7920_cov_38.4945 . CDS 817 932 . + 2 ID=cds.g12697.t1;Parent=g12697.t1 NODE_2051_length_7920_cov_38.4945 . exon 1202 1723 . + . ID=g12697.t1.exon3;Parent=g12697.t1 NODE_2051_length_7920_cov_38.4945 . CDS 1202 1510 . + 0 ID=cds.g12697.t1;Parent=g12697.t1 NODE_2051_length_7920_cov_38.4945 . three_prime_UTR 1511 1723 . + . ID=g12697.t1.utr3p1;Parent=g12697.t1 #PROT g12697.t1 g12697 VTVSAGKGFADTRPLNCSASPSQLPAQPSPAAVSSSRKATVAPSATRGTTPVVTGGGTGTGDASGQSNDNPTTGANSGSGSGGVSVGAIAGGVVGGLAAIGGVAGVVIYFKMVQSSSPKHGRMGSQMDVELRGHSETVNVLHNPTNSNSYDDIRSVPPPKTAPKPPGGKEQRANYAYAAQNADELDLEAGDVITVTKVGADGWNAGRNKRTNKTGVFPATFAS* # ORIGINAL: g12698.t1 original gene structure, not modified by PASA NODE_2051_length_7920_cov_38.4945 AUGUSTUS gene 2591 4366 . - . ID=g12698;Name=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS mRNA 2591 4366 . - . ID=g12698.t1;Parent=g12698;Name=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 4335 4366 . - . ID=g12698.t1.exon1;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 4335 4366 . - 0 ID=cds.g12698.t1;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 4029 4128 . - . ID=g12698.t1.exon2;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 4029 4128 . - 1 ID=cds.g12698.t1;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 3669 3726 . - . ID=g12698.t1.exon3;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 3669 3726 . - 0 ID=cds.g12698.t1;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 3028 3156 . - . ID=g12698.t1.exon4;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 3028 3156 . - 2 ID=cds.g12698.t1;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS exon 2591 2760 . - . ID=g12698.t1.exon5;Parent=g12698.t1 NODE_2051_length_7920_cov_38.4945 AUGUSTUS CDS 2591 2760 . - 2 ID=cds.g12698.t1;Parent=g12698.t1 #PROT g12698.t1 g12698 MENAEYARDPCPFRILDDFGGAFAMGLVGGSVWHSFKGYKNSPKGARFAGTISAIKTRGPVLGGNFAVWGGLFSTFDCSLIALREKEDPWNSIMSGALTGGVLAARGGVGASLRSAAVGGVLLAIIEGVGIAVSRWMAEQTKPVMPELPDAPLPPKQNSAAL* # ORIGINAL: g10459.t1 original gene structure, not modified by PASA NODE_2169_length_7436_cov_35.0571 AUGUSTUS gene 548 3596 . + . ID=g10459;Name=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS mRNA 548 3596 . + . ID=g10459.t1;Parent=g10459;Name=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 548 871 . + . ID=g10459.t1.exon1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 548 871 . + 0 ID=cds.g10459.t1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 1126 1317 . + . ID=g10459.t1.exon2;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 1126 1317 . + 0 ID=cds.g10459.t1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 1595 1643 . + . ID=g10459.t1.exon3;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 1595 1643 . + 0 ID=cds.g10459.t1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 1824 1955 . + . ID=g10459.t1.exon4;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 1824 1955 . + 2 ID=cds.g10459.t1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 2125 2883 . + . ID=g10459.t1.exon5;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 2125 2883 . + 2 ID=cds.g10459.t1;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 3175 3596 . + . ID=g10459.t1.exon6;Parent=g10459.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 3175 3596 . + 2 ID=cds.g10459.t1;Parent=g10459.t1 #PROT g10459.t1 g10459 WCEKQPICRRLTLKSLLISPMQRLTKFPLFFRDVSRRLGKLQPGSSVLHGNSPQDVAGLVADMQSRFDAFLADVNAAVREKEGSLRARMLQECVEFDLGSDGAYEASREYLRLDAPGRFVVREGRLQKAGAIRATDRYVILMNDSLIVARLQRQLLAGSKSAPKEQYIVNKEPIPIGNLRVEDIEEDAGIGNAFIVLHVTPSGETVEGYTFLAASEKDKVAWLDSFATLITDVQEAAELWHIRVAIPASALTSTLTSSASASAVSMAAAVPEDDEAPSVPQPEGSVACVAAAVTVPSSARYGEITKAACALHGLDWTRFDLSVAKAFVEAAPSPHLGPDGRRGSQQSFSNSSINNTSINSSNNNNSNGSSSNSNNNSTPAARIRGMSASISSASIGSHSGQMHSAASPLPPARNTQSGQSAQPTQPTQPAQSRRSLSASHNAHAQELIVLCSGDHVVADPFAPVCEALLADDHVPRFLLVPKAEADDVSALRSRVRELEAAVSRLETASSASKVRARLVRRASTFGPAPGDDDAPMSPAEHSLALSLSANGAAPDALARLRMAARRGTLRGTMEEHVTASAAAPEIPKSSARLLAELRAALERERAELPREAADALTTLSQFATL* # ORIGINAL: g10460.t1 original gene structure, not modified by PASA NODE_2169_length_7436_cov_35.0571 AUGUSTUS gene 4149 6874 . - . ID=g10460;Name=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS mRNA 4149 6874 . - . ID=g10460.t1;Parent=g10460;Name=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 6203 6874 . - . ID=g10460.t1.exon1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 6203 6874 . - 2 ID=cds.g10460.t1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 5984 6075 . - . ID=g10460.t1.exon2;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 5984 6075 . - 2 ID=cds.g10460.t1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 5688 5727 . - . ID=g10460.t1.exon3;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 5688 5727 . - 0 ID=cds.g10460.t1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 5328 5416 . - . ID=g10460.t1.exon4;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 5328 5416 . - 2 ID=cds.g10460.t1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 4824 4958 . - . ID=g10460.t1.exon5;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 4824 4958 . - 0 ID=cds.g10460.t1;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS exon 4149 4235 . - . ID=g10460.t1.exon6;Parent=g10460.t1 NODE_2169_length_7436_cov_35.0571 AUGUSTUS CDS 4149 4235 . - 0 ID=cds.g10460.t1;Parent=g10460.t1 #PROT g10460.t1 g10460 IFIDEKTVAKINARNRGVSEASLGAHSAQQTSPKLSSNSLNEFSARRSSEHSVVSLGDNRMRVRSWLDDQEGGGDGGHRLSLSVDASQYRHQSQPSQSQGLHGGVGLDDGRGDRDVRAIATLAASAPASGGVLAPAAVDQHRGGHVHSHGQHDVEKGAGGGKDDGLSGVGSDAGDSSAALGAVSGVRSPTSVLSDSEGKSNEDTNKTSAVLNGSGPSTTTLTTGPDAKRKRKMNKKEEKEAMREAIAETLRLQEQLSPGTKDMATLMAADKDINETLKRWNRRMAANKKGLNVTIAKDRKHQVMMEMQQDKALVGIPRMVRNELLEEAYSINLRVVHAYRSQLGDRNENTLKATEQVRRIAAELERKCDV* # PASA_UPDATE: g2160.t1, single gene model update, valid-1, status:[pasa:asmbl_6205,status:12], valid-1 NODE_3552_length_3222_cov_37.8561_potentialcontaminant . gene 286 3160 . + . ID=g2160;Name=g2160.t1 NODE_3552_length_3222_cov_37.8561_potentialcontaminant . mRNA 286 3160 . + . ID=g2160.t1;Parent=g2160;Name=g2160.t1 NODE_3552_length_3222_cov_37.8561_potentialcontaminant . exon 286 2518 . + . ID=g2160.t1.exon1;Parent=g2160.t1 NODE_3552_length_3222_cov_37.8561_potentialcontaminant . CDS 286 2518 . + 0 ID=cds.g2160.t1;Parent=g2160.t1;5_prime_partial=true NODE_3552_length_3222_cov_37.8561_potentialcontaminant . exon 2748 3160 . + . ID=g2160.t1.exon2;Parent=g2160.t1 NODE_3552_length_3222_cov_37.8561_potentialcontaminant . CDS 2748 3160 . + 2 ID=cds.g2160.t1;Parent=g2160.t1 #PROT g2160.t1 g2160 PPPSPLLAVAPIENDMYSSPSSDEGERRTNAPRRRTSIGRGSPTGSRLVKQPAQVLETATPPDIDAIGTSSAGDDGSIATGHVNYSNIANNYANAMEVDHRENNNNTNDGAPPSAPDSELPSVHPSPVVTSRSLDSQDVSPKIAPFSPASVTSGAPVGGVITPSPLKGHASSSPPTKSHVAVLRRSESVKDVVKCVPQPPLLKRSGSSAFVHPSKIKGGPRIPLHIDIAKSMRDRRMQTLPETLPSMEGGAKVNHNPASLHSTSTAKASMSSTVPLARSGDVTKKATDAPRTVARPTAKRAGRVSHAASVDASVSTATAPDKRGRRPSMLTQSQSVDEPPRKGRAAVMRRNSTTSENSPATSRNNKHVMMLSPHGARRRASASGGDDGDRAETPKLLVTTPTMDGRKMAVLIEEGIRLAATASLDEERAEGAAEGVDAVDAMNVKEKLTENDDDETEGSLAADIAATKKRIAARESDGTVENHVVAHDESGGAVPAKYDSGAAVVAARLLAGGNVSIETQVAVMDLSGMVGSNTSIATLSSSVDDVNEDNNDPERIGDGGADAEKNHVYSSAAASEALAPKHTRELSSDFGSALSLTQDSRNATPSSGTSDSAAISSAVTPNPADIEWKEAMAPRDVACPETTAGSATLSWTRPPEVYVIEEGYESRVEVVVNGYMLRVGSLEIALDDVQTTMATIDGLDPGTQYTASLACLCDGRRVDSNGTTAVFAEESNESDPVVFTTGVQEPAAAPINLRVCNASVNEIDLEWVPVETDGGGRSNGTLVLGYRILLNGDEYGTVEGTGVSMVTIGGLEPGTAYRFGVQAFVEEGCGAQPAAEVDGSTLHAVEDSAPAQPLLMPPTSIQASQEGPDGVNLSWVAVEGM* # ORIGINAL: g11078.t1 original gene structure, not modified by PASA NODE_1213_length_12975_cov_52.205 AUGUSTUS gene 414 3040 . - . ID=g11078;Name=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS mRNA 414 3040 . - . ID=g11078.t1;Parent=g11078;Name=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 2195 3040 . - . ID=g11078.t1.exon1;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 2195 3040 . - 0 ID=cds.g11078.t1;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 1453 1640 . - . ID=g11078.t1.exon2;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 1453 1640 . - 0 ID=cds.g11078.t1;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 874 1024 . - . ID=g11078.t1.exon3;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 874 1024 . - 1 ID=cds.g11078.t1;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 414 647 . - . ID=g11078.t1.exon4;Parent=g11078.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 414 647 . - 0 ID=cds.g11078.t1;Parent=g11078.t1 #PROT g11078.t1 g11078 MAPARCKKLWAVALVLLVVVAALPSARASGDAAFDDDDEFEEDAEVASSPVPVAVGGAGTPDSATVHTQSAASPSKKQSARDYYDEEEFEGLDDDVIEAPVKPSKAKAKKADAPASPSEETKPHVITAMTGDPEGFTVEKYMIELAAVAGLFIYALNYLRGRSLNASIASSWFEGSRSVLENNFAVVGEGAQPPGTCALIKESPSDYILWASGRVHCESVEGIVSLVRRHDLVSIGLGRLQGAQKDSVSFTVSMDVNVMDAFVLAIVPKKKAAKIKQEYLDLFYLTNTYAGERYDLPAQYTILSDNIDLFHSIIDGNVAKAIRDNADIFESLHITDQFAGKIDPNAAPPSKLEGVKRIFMNITLPSRGDMERAHTFTRILIHLIDKVARLELPQSVREDTKRRRTGVIELLLKQTHLQRQEAAQLRKEEKRRKEREAAETMDPEARRKWEEKEHKREMKKKRASKQMVVMGR* # ORIGINAL: g11079.t1 original gene structure, not modified by PASA NODE_1213_length_12975_cov_52.205 AUGUSTUS gene 4601 6780 . + . ID=g11079;Name=g11079.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS mRNA 4601 6780 . + . ID=g11079.t1;Parent=g11079;Name=g11079.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 4601 4857 . + . ID=g11079.t1.exon1;Parent=g11079.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 4601 4857 . + 0 ID=cds.g11079.t1;Parent=g11079.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS exon 5460 6780 . + . ID=g11079.t1.exon2;Parent=g11079.t1 NODE_1213_length_12975_cov_52.205 AUGUSTUS CDS 5460 6780 . + 1 ID=cds.g11079.t1;Parent=g11079.t1 #PROT g11079.t1 g11079 MDGGMEGSEMSAEADAAGDCATGNASDTPPVLRTKAAICGICARQMAQYQCPRCHVPYCSLGCYKSESHADCSEGFYRDAFVEGLRNKTVDPSERRRIMDALVRLERESQAPPEPDDLTTDSDDEPDEHVPPACATAPSESSEEVPHVPSLAQRLQGVDLHGDDGEFDADVIWAKLTPQERADFERLAADGRLAEMAASNSHGTRVTLWWEGERRLIETIDADNGSQGNLLNGGVGSSGANALTVGPDVPAHATPLSVLLGGKTPSPDVVFNILEVMCAYAVALRSLSADAFAAGQVKAVDIHGSIASRVFDLSAVLSCNATYGDPLVPVHAVVLRASTNSHFDVRGVVEEADATECLIVDAEKLYASKSFALRAIGHTMTAFGVLKSSKKDSKRELTQTEGVGVLRAAALQQSSLDNNNNNSNNNNNKHNNSNNSSSVALSRNMALAVERKLAFFVSWLYAAPDDGFFDSTVAAIKAERDRLRIEREAHATDSARVKRTVVSSEKAGDIGNESSESRRALIRPL* # PASA_UPDATE: g11080.t1, single gene model update, valid-1, status:[pasa:asmbl_826,status:12], valid-1 NODE_1213_length_12975_cov_52.205 . gene 7584 9366 . - . ID=g11080;Name=g11080.t1 NODE_1213_length_12975_cov_52.205 . mRNA 7584 9366 . - . ID=g11080.t1;Parent=g11080;Name=g11080.t1 NODE_1213_length_12975_cov_52.205 . five_prime_UTR 9179 9366 . - . ID=g11080.t1.utr5p1;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . exon 9176 9366 . - . ID=g11080.t1.exon1;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . CDS 9176 9178 . - 0 ID=cds.g11080.t1;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . exon 8293 8798 . - . ID=g11080.t1.exon2;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . CDS 8293 8798 . - 0 ID=cds.g11080.t1;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . exon 7584 7923 . - . ID=g11080.t1.exon3;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . CDS 7704 7923 . - 1 ID=cds.g11080.t1;Parent=g11080.t1 NODE_1213_length_12975_cov_52.205 . three_prime_UTR 7584 7703 . - . ID=g11080.t1.utr3p1;Parent=g11080.t1 #PROT g11080.t1 g11080 MVSQALLVVFAGAAAIYFAVLYEKEYHDLATLGLTRAAFGSDGLTSHHYAALKTLPIASLLVYVLLVGLRGRTYNAKIAGGLIFSAIGDICLVWPKEYFIHGMIAFGVAHVIYVSAFGFRPLRISLGVLHAAAGTAVYCFLYPTLPRKLIFPVAAYLIVLVTMGWRALARIGTGQKGALLGAFGATAFMVSDLLLSVNKFHSTFPGAQFAIMSTYYLGQLGIALSTIDWHHTGGHVANKKLQ* # PASA_UPDATE: g11081.t1, single gene model update, valid-1, status:[pasa:asmbl_827,status:12], valid-1 NODE_1213_length_12975_cov_52.205 . gene 10219 12672 . - . ID=g11081;Name=g11081.t1 NODE_1213_length_12975_cov_52.205 . mRNA 10219 12672 . - . ID=g11081.t1;Parent=g11081;Name=g11081.t1 NODE_1213_length_12975_cov_52.205 . five_prime_UTR 12634 12672 . - . ID=g11081.t1.utr5p1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 12505 12672 . - . ID=g11081.t1.exon1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 12505 12633 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 12281 12343 . - . ID=g11081.t1.exon2;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 12281 12343 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 11928 12143 . - . ID=g11081.t1.exon3;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 11928 12143 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 11702 11767 . - . ID=g11081.t1.exon4;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 11702 11767 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 11219 11488 . - . ID=g11081.t1.exon5;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 11219 11488 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 10857 11063 . - . ID=g11081.t1.exon6;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 10857 11063 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 10696 10755 . - . ID=g11081.t1.exon7;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 10696 10755 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . exon 10219 10522 . - . ID=g11081.t1.exon8;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . CDS 10406 10522 . - 0 ID=cds.g11081.t1;Parent=g11081.t1 NODE_1213_length_12975_cov_52.205 . three_prime_UTR 10219 10405 . - . ID=g11081.t1.utr3p1;Parent=g11081.t1 #PROT g11081.t1 g11081 MKLFMIAALVALMVAGANADLKCEACEFAMGKVDGIATSTSTESEITSLVEKVCLKAPSILRTPCDSVIETYGPTIITNIVNKVLAPLKVCTALHICAAPSVVAAAPAGLETTIRCALCDYTVKKVETQITSGAGEAEINAEINKLCGDLPAGLMQSLCEKYVPTYADEVVSKIVAGEPADKVCAALGQCTAAFEMAAPVAGFSPKCALCELAVAKVDAAITSNKTENVVISDLQKVCAAVPSELRGECDSLVSQYGVNIVNALAMLANPKKVCSYVKLCTDDNEILLRSISDETKCAICEFALKEVDAGLDSATVESKVIGLLNGACSKMSKVETACDALVSAFAKQIWEALVSKIQPQAVCTKVKLCAAPSFY* # ORIGINAL: g2424.t1 original gene structure, not modified by PASA NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS gene 8 208 . - . ID=g2424;Name=g2424.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS mRNA 8 208 . - . ID=g2424.t1;Parent=g2424;Name=g2424.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS exon 8 208 . - . ID=g2424.t1.exon1;Parent=g2424.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS CDS 8 208 . - 0 ID=cds.g2424.t1;Parent=g2424.t1 #PROT g2424.t1 g2424 MSSKCQRCAEATSAGINSTFDSVPMRDLYETLLADITSEFDRMPLGAVETSGKWSRQRASSNRKKPW # ORIGINAL: g2425.t1 original gene structure, not modified by PASA NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS gene 4526 4798 . - . ID=g2425;Name=g2425.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS mRNA 4526 4798 . - . ID=g2425.t1;Parent=g2425;Name=g2425.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS exon 4526 4798 . - . ID=g2425.t1.exon1;Parent=g2425.t1 NODE_2726_length_5312_cov_57.6743_potentialcontaminant AUGUSTUS CDS 4526 4798 . - 0 ID=cds.g2425.t1;Parent=g2425.t1 #PROT g2425.t1 g2425 MRRKSDGVFTRGEALRTMLGLTAVESSEFLIRESDAPDFEIFVSAAHHGHHGVAIATGRAPTLLSAAEAEIVLVQPPFCRRVPKPAHNLL* # ORIGINAL: g7785.t1 original gene structure, not modified by PASA NODE_150_length_34624_cov_35.8053 AUGUSTUS gene 10746 17444 . + . ID=g7785;Name=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS mRNA 10746 17444 . + . ID=g7785.t1;Parent=g7785;Name=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 10746 10866 . + . ID=g7785.t1.exon1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 10746 10866 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 11256 11476 . + . ID=g7785.t1.exon2;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 11256 11476 . + 2 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 11628 11752 . + . ID=g7785.t1.exon3;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 11628 11752 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 11965 12026 . + . ID=g7785.t1.exon4;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 11965 12026 . + 1 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 12165 12223 . + . ID=g7785.t1.exon5;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 12165 12223 . + 2 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 12467 12517 . + . ID=g7785.t1.exon6;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 12467 12517 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 12750 12852 . + . ID=g7785.t1.exon7;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 12750 12852 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 13194 13270 . + . ID=g7785.t1.exon8;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 13194 13270 . + 2 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 13408 13470 . + . ID=g7785.t1.exon9;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 13408 13470 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 13831 13912 . + . ID=g7785.t1.exon10;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 13831 13912 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 14142 14356 . + . ID=g7785.t1.exon11;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 14142 14356 . + 2 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 14580 14632 . + . ID=g7785.t1.exon12;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 14580 14632 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 15113 15207 . + . ID=g7785.t1.exon13;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 15113 15207 . + 1 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 15560 16077 . + . ID=g7785.t1.exon14;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 15560 16077 . + 2 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 16431 16544 . + . ID=g7785.t1.exon15;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 16431 16544 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 16996 17100 . + . ID=g7785.t1.exon16;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 16996 17100 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 17304 17444 . + . ID=g7785.t1.exon17;Parent=g7785.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 17304 17444 . + 0 ID=cds.g7785.t1;Parent=g7785.t1 #PROT g7785.t1 g7785 MAQIEYDQSGHTFLYFILTLLSLYLIPSTLSYYREYAGSDGKDKRADASKCRCEPCIRKRRLMETKNAKKSKVSLGFVMWITAWIVFVVIAHRCATAAPTYEEWDPYKILNIEKGATVAEVRKQYRHLSRTLHPDKNPDDPLASEKFNEIAKAHEALTDDTARENWEKYGNPDGPRSTTFGIALPQWIVERENKGLVVGMYFLAFMVILPIAVGTWWYRSRRYLEGTVLIQTLRHYRSHIGPNMTIDKLVQVLAFSDEFRELLHLRRSDNLESVLKSFPDPLFATVKEKERSKSMLAYIIKARTLIMAHLYRVELSPDLKSDLAVVLAKTPMLIRAMADPTYVYLDQPHTLRVTQLCMHMSQMIVQAVWDSISPLVQVPHYTPEIGRHFNTKKRNIKTIYNLVDMPDEDRRSLLRSLSDESYEDVMEFLRTYPYVDMEIKHRSDGSPDGAIYAGSIVTVDVRLRRMSYFEYLSLKSTTEKAKDIAPKAIEAPALSKKARKRRVKDAAPTADGTVTAVEAADADADAGGESDGEDKEETNGAVVAGAGAGVLVVSGKKEGVEKENGKGDEQVEKEDDDDEDTIDWEHAKQLKRPLTEILDKGDKYSHPVHAPHFPEAKQEHWWLFVGDEKANQVKTKPQFLEGLKSSPSFEFTDFEIMMRAPEKAGDHRFTVFLVSDAYLGCDQKATLRMNVVDPPPETLAARTQPTENVADGDGDAYDDEYDEEDEESASEAEN* # PASA_UPDATE: g7788.t1, single gene model update, valid-1, status:[pasa:asmbl_1820,status:3], valid-1 # PASA_UPDATE: g7788.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1821,status:3], valid-1 NODE_150_length_34624_cov_35.8053 . gene 25055 28505 . - . ID=g7788;Name=g7788.t1 NODE_150_length_34624_cov_35.8053 . mRNA 25055 28505 . - . ID=g7788.t1;Parent=g7788;Name=g7788.t1 NODE_150_length_34624_cov_35.8053 . five_prime_UTR 28207 28505 . - . ID=g7788.t1.utr5p1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . five_prime_UTR 27744 28063 . - . ID=g7788.t1.utr5p2;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 28207 28505 . - . ID=g7788.t1.exon1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 27680 28063 . - . ID=g7788.t1.exon2;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 27680 27743 . - 0 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 26891 27480 . - . ID=g7788.t1.exon3;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 26891 27480 . - 2 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 26637 26750 . - . ID=g7788.t1.exon4;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 26637 26750 . - 0 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 26280 26404 . - . ID=g7788.t1.exon5;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 26280 26404 . - 0 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 25795 26010 . - . ID=g7788.t1.exon6;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 25795 26010 . - 1 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 25512 25613 . - . ID=g7788.t1.exon7;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 25512 25613 . - 1 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . exon 25055 25373 . - . ID=g7788.t1.exon8;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . CDS 25127 25373 . - 1 ID=cds.g7788.t1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . three_prime_UTR 25055 25126 . - . ID=g7788.t1.utr3p1;Parent=g7788.t1 NODE_150_length_34624_cov_35.8053 . mRNA 25055 28505 . - . ID=g7788.t1.1.5b6be70a;Parent=g7788;Name=g7788.t1 NODE_150_length_34624_cov_35.8053 . five_prime_UTR 27744 28505 . - . ID=g7788.t1.1.5b6be70a.utr5p1;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 27680 28505 . - . ID=g7788.t1.1.5b6be70a.exon1;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 27680 27743 . - 0 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 26891 27480 . - . ID=g7788.t1.1.5b6be70a.exon2;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 26891 27480 . - 2 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 26637 26750 . - . ID=g7788.t1.1.5b6be70a.exon3;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 26637 26750 . - 0 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 26280 26404 . - . ID=g7788.t1.1.5b6be70a.exon4;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 26280 26404 . - 0 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 25795 26010 . - . ID=g7788.t1.1.5b6be70a.exon5;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 25795 26010 . - 1 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 25512 25613 . - . ID=g7788.t1.1.5b6be70a.exon6;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 25512 25613 . - 1 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . exon 25055 25373 . - . ID=g7788.t1.1.5b6be70a.exon7;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . CDS 25127 25373 . - 1 ID=cds.g7788.t1.1.5b6be70a;Parent=g7788.t1.1.5b6be70a NODE_150_length_34624_cov_35.8053 . three_prime_UTR 25055 25126 . - . ID=g7788.t1.1.5b6be70a.utr3p1;Parent=g7788.t1.1.5b6be70a #PROT g7788.t1 g7788 MRLLFLILAIAAVSSVAVLLMVYPCLGAPTSDSKQPMGHRGDWTLARRFENTESADDESESDEPVDNADGVIIDDGEPDNDVEDAKFDPNDDDDEDDPESAESHEQDEDGSDGGRGRSRCHGRGRGHSAKHHGRRPCKGHRKHCTRRPSASTTPHSPTPTTSTPYRSSSLAQPTSTGSAVESTFPSIFPTVWKTLVIVYRTTNITYPDRTDPSNPITRTFHAEMKQAQLTNIEETVAEWANLTFSLSGGLGAIDVTIAYPDHPVTFEYVCDFGPTQFWLCPQNNPDVPILAPIGSYDSIIAVWKIFNETTFESFPQPFFGLTAYPPSGNGEAGWSEIIVPAWDNFLFNAGQRSVFLHEWMHQVLGYYSSRNALAGITGDPLHSASNYGYFDSSTIGLGFEWVDWYRDLMRGVVVDPSTGSHVGIGPCGWSAGTPTNPMPVDTSLPPCFGSGGASEATEREAGMARVDAIADGIIVRDVPFFIPGR* #PROT g7788.t1.1.5b6be70a g7788 MRLLFLILAIAAVSSVAVLLMVYPCLGAPTSDSKQPMGHRGDWTLARRFENTESADDESESDEPVDNADGVIIDDGEPDNDVEDAKFDPNDDDDEDDPESAESHEQDEDGSDGGRGRSRCHGRGRGHSAKHHGRRPCKGHRKHCTRRPSASTTPHSPTPTTSTPYRSSSLAQPTSTGSAVESTFPSIFPTVWKTLVIVYRTTNITYPDRTDPSNPITRTFHAEMKQAQLTNIEETVAEWANLTFSLSGGLGAIDVTIAYPDHPVTFEYVCDFGPTQFWLCPQNNPDVPILAPIGSYDSIIAVWKIFNETTFESFPQPFFGLTAYPPSGNGEAGWSEIIVPAWDNFLFNAGQRSVFLHEWMHQVLGYYSSRNALAGITGDPLHSASNYGYFDSSTIGLGFEWVDWYRDLMRGVVVDPSTGSHVGIGPCGWSAGTPTNPMPVDTSLPPCFGSGGASEATEREAGMARVDAIADGIIVRDVPFFIPGR* # PASA_UPDATE: g7786.t1, single gene model update, valid-1, status:[pasa:asmbl_1819,status:12], valid-1 NODE_150_length_34624_cov_35.8053 . gene 17789 20429 . - . ID=g7786;Name=g7786.t1 NODE_150_length_34624_cov_35.8053 . mRNA 17789 20429 . - . ID=g7786.t1;Parent=g7786;Name=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 20111 20429 . - . ID=g7786.t1.exon1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 20111 20429 . - 0 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 19916 20005 . - . ID=g7786.t1.exon2;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 19916 20005 . - 2 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 19573 19754 . - . ID=g7786.t1.exon3;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 19573 19754 . - 2 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 19352 19386 . - . ID=g7786.t1.exon4;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 19352 19386 . - 0 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 19002 19167 . - . ID=g7786.t1.exon5;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 19002 19167 . - 1 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 18618 18760 . - . ID=g7786.t1.exon6;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 18618 18760 . - 0 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 18202 18382 . - . ID=g7786.t1.exon7;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 18202 18382 . - 1 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . exon 17789 17921 . - . ID=g7786.t1.exon8;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . CDS 17844 17921 . - 0 ID=cds.g7786.t1;Parent=g7786.t1 NODE_150_length_34624_cov_35.8053 . three_prime_UTR 17789 17843 . - . ID=g7786.t1.utr3p1;Parent=g7786.t1 #PROT g7786.t1 g7786 MYLHAGDIVPWGSYRRLRLLLLMCMVEALAALQEDTSKETIRSSISFLLGCDIGDPAPHRLLLYARHILGVASGTSGSLEASAGGGATSPFPTTRFDSAWKCHFVEGGLAATSPHGICVVPNVDSLKTGEKERLAELLDEGAVHCTIPQQEADISHVWINKPAPMKVAVRCGFWMLSERPMPVPVFQPSLGWGKKTTESAGGLPRKLVSRVDIVLDCSFRASGAETVRHDKGFAEQYLCARLCNVSVEQQRSLFPSIDCDELVSVLRSAASLSVTIGSRARDMIQRYYVASRRVRMSGVHATEVPLSCLETLSKLAMAHARLSMRAVAEIEDVTVAIVMYEESLATLYGSSMLSIRPSPHYGDCADAYGGNTHGERMSRLTTHIMRFCDACAPTPFA* # ORIGINAL: g7790.t1 original gene structure, not modified by PASA NODE_150_length_34624_cov_35.8053 AUGUSTUS gene 31915 33164 . + . ID=g7790;Name=g7790.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS mRNA 31915 33164 . + . ID=g7790.t1;Parent=g7790;Name=g7790.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 31915 32253 . + . ID=g7790.t1.exon1;Parent=g7790.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 31915 32253 . + 0 ID=cds.g7790.t1;Parent=g7790.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 32412 33164 . + . ID=g7790.t1.exon2;Parent=g7790.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 32412 33164 . + 0 ID=cds.g7790.t1;Parent=g7790.t1 #PROT g7790.t1 g7790 MWYHLAEYQQCVSDEAASRRRKEMETAYSRGARGKRGQPTDLFYALRLLMLKMVEDSAIVVHPVFADTDFHIRVVRDIKEKSPMNSRLDVFSAFYAVSFKEVAQFVGEYFGLEENLRKLVSKALDHSELDECMENLLRMVALSQKPILSIESNKMADLLSTNMLFASDAVQSKVVEIARTGDVAHTFDDILEGSLKTLCVDMRDEPLMLAVLRQVAVDLAVTARKSALGVVPKNAPLIERTDFVYAKLQKELSLRKGEKAEEMFAWVIFRETMMLKRASLRTTLSTVLGCLLDTYRLDWLSEIEVCVDRIRDCTGGDPFSLALEWSAVCFQRRSGCRRRCSIPRQTHFGWCGRTVLSPVEGYE* # ORIGINAL: g7789.t1 original gene structure, not modified by PASA NODE_150_length_34624_cov_35.8053 AUGUSTUS gene 31075 31797 . + . ID=g7789;Name=g7789.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS mRNA 31075 31797 . + . ID=g7789.t1;Parent=g7789;Name=g7789.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 31075 31797 . + . ID=g7789.t1.exon1;Parent=g7789.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 31075 31797 . + 0 ID=cds.g7789.t1;Parent=g7789.t1 #PROT g7789.t1 g7789 MATTEVTPLSATASTVAWLYNDKTLHECADPYIEIYKRATAFRTLDEQKTIFGNVLKKIVPLTPIEEDHNPARFNSYLLEPFGTIASLLHSAVADADSRLQGRKTLALCAASGSGKTKLLYSLATNASLQHRASVVIIPLHTGAGWHAALRALEKMLGDLKPVSQNLNETETAIAALDLVRLFVASFVLWILVLNNRAADMNHDERRKMWVVAMENGHGELGVARVFELLLTSLPTADHS* # PASA_UPDATE: g7784.t1, single gene model update, valid-1, status:[pasa:asmbl_1817,status:12], valid-1 NODE_150_length_34624_cov_35.8053 . gene 1451 9530 . + . ID=g7784;Name=g7784.t1 NODE_150_length_34624_cov_35.8053 . mRNA 1451 9530 . + . ID=g7784.t1;Parent=g7784;Name=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 1451 2618 . + . ID=g7784.t1.exon1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 1451 2618 . + 0 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 2907 3756 . + . ID=g7784.t1.exon2;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 2907 3756 . + 2 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 4054 6516 . + . ID=g7784.t1.exon3;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 4054 6516 . + 1 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 6897 7651 . + . ID=g7784.t1.exon4;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 6897 7651 . + 1 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 8040 8752 . + . ID=g7784.t1.exon5;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 8040 8752 . + 2 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . exon 8933 9530 . + . ID=g7784.t1.exon6;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . CDS 8933 9247 . + 0 ID=cds.g7784.t1;Parent=g7784.t1 NODE_150_length_34624_cov_35.8053 . three_prime_UTR 9248 9530 . + . ID=g7784.t1.utr3p1;Parent=g7784.t1 #PROT g7784.t1 g7784 MAAVNPTAAQNARRTQEANASLFKAIDKGDVNTATRLLRERQVELWARHQSNSTLVEYARGLARRFTSLNDQARAKPYLDIVAAIERELAVVMRDAVVKSNEELAKVLVGAGADAYQGNQADPLGLVGVAAQFTANPAILHLLVASHKYCAGALEQIDGHGYSALQIAQRCANNATAAAIAWIMNGRLVECARIGDEGSRERFRRLLSMGASIESADADGNTPLCHAVLARQTEFVRFLLAIGADSSHKNKAGKNAYAISLDLDPRPAQLVTALRAHEASSALRTAILTRGTELTAADVREFVNKGADVNHCDGLLDSILHLCVRHGCTPDVLRMLVGTLRANIEAVNVANNRPVEEAIAAHNVGALDVLFSLGAEVVRSHGRIIDCAAASGSSASLSTVRSELNRRMWLMVQGNDIAGIRAMHACGAELASVAPPSSPVATNSDASTESAPEYTDASPGNDATSGWTVLHYAASVPLTDVIRVLAELGAIMDCQSASGMTPLLIACERGHLDAVTLLHTLGADIQLCDAAGDTALLVAVRGGHAAIVEYLVLWGADTAHENERKECALGIATAKENASLTSFFEALSFNAEELCAEPFVSVRGSIDLAPVAVAVQIQPLRRESSPFELSAIEAGNRNMGMLKGTPNDLLRKATNEVQLNEVRRALAEGADVTHRRNNETCIQSAHRIAEMHRTTAEMQRMTPIMYNDSIAKQRAALDVAAEMQRHLDDLFADAVAKQPVETLRALHAAGANIAQARGPFGFVGIAASARDEPSILDFLVRNSADNSKLIEHRTQNGETVISLARSKNNRNVVAYVIWVISTRLSSFVGKLNVAAVRYLHSIGALPECEHVPGQRSANLHAAVSTGNLELVRFLAQIGADIDWRGADGRTLSQFAASIGHIAIAKFLAGQERDHALRVAAASGDFASVRRIHAGGADINALNFEGSTAVSMCALHGDYIGVIKYLVERGASVVHRNVNLPTLVKMARDKGHGRVAAYVSGCVNAQFVRAARRGDVEAMGDLYALGVDMQYEEAGGHTALAVAASAHGLDVVQWLVLHGAEPNLPTSSGDYVLGLASAKGDYAMVKFLVEECRADTSALNGEGKTAAEIARANGNIEVAKYLNPADAAELDKLSASAKATAAAGDKPPKRTTEELLEAVRRAHLPVVREFEAEVYASLALKTEHCERMLLLARQLNQFEVVRLLEPHYLSLTSKADSTKTQDRLFAGSKEHAILLGGFLKGLSAHVTGGDVQIDPGDPRTFDALFNNMQGRVVHERERLNDAATAAAVLKQYREDSERLQREMASLSESRREMEFTRGKFVRQLSELEQRLNSAKSARERVAARKELEELRAQTGELNAQMTVLYRAHEVREARAKVLQTFKEDPSTFLYYRTVSLAIHDVFVSSKAAAGGMVQVETGDMHKAAVAVSLLGKVMSIIPAAGSAGSCICNAAAVGLDFLDKKRQIATAKGISMLASVSEAERVSDETARKLTLWYWNQIGLLERPDSKAGARDPTADLPARMFAEYAVLRIVRALNKSLFDSSRPLDDQFVWTVVSKDPFAKRSLLERIGVGIGSKKISLTNGEKTDLRSLYGLCGLMVDNGDLYTNDKSEVSKYGYCYGTILAAKGRGLSRSGHGPCPAKLFRPSIDSFDDDEKAVAAAISSASTSASASASANAGSSLDPAPSLNDKERKSADVARLVSSGMTKGKVREEIKAVLRDEELAREMIESRIAEANASTRLYAQEEVEGLREALEESTTSFHDKVDAITETVNSGVTVMQAEVKACKADVASTVSRANAELKAVSDGQLRELNATVSTATAALESTVRKAVDDSDKRAESLRLEIGNAKNDLRSQHASASAELRQLFEALRNESNESHTRWTQGQEARFKVLEGKVAAQQDALYSAASVKLEGLANVAAETALAAKQVADGALSLAEDAMRDARAAAEAVVVAAQRAETAQASVSEMAEAVKTALKRAETAEKMLKDVEKRTVDVGKDLERREARLKELETAFEKRSADVAKDMEKRNVDAQKEAEKRELRIKELEVALEKRAAEVAKDNDKREQKMKELEASVLKAFKKIKDKGLKLDD* # ORIGINAL: g7787.t1 original gene structure, not modified by PASA NODE_150_length_34624_cov_35.8053 AUGUSTUS gene 23703 24317 . + . ID=g7787;Name=g7787.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS mRNA 23703 24317 . + . ID=g7787.t1;Parent=g7787;Name=g7787.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS exon 23703 24317 . + . ID=g7787.t1.exon1;Parent=g7787.t1 NODE_150_length_34624_cov_35.8053 AUGUSTUS CDS 23703 24317 . + 0 ID=cds.g7787.t1;Parent=g7787.t1 #PROT g7787.t1 g7787 MRFLCRLDLRTPPYYWRLLIIAAYRRIQSLEGDSVDGLTKEYILRSLLAACPSDITEPPQPHYQPFSGYPAFDMNQILSRVMATVRDPPAVVLSELLSKEIVPAICAAGLGPVIWFARLHCSVSQDDIPPQFQHMDNCLIRQAHVMLELLAPFVAKTKKALAGTPYAVGRKSDAHYNLADDRMDTLLDCFRRAASKSDVYGIIE* # ORIGINAL: g2872.t1 original gene structure, not modified by PASA NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS gene 1 1643 . - . ID=g2872;Name=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS mRNA 1 1643 . - . ID=g2872.t1;Parent=g2872;Name=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS exon 1415 1643 . - . ID=g2872.t1.exon1;Parent=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS CDS 1415 1643 . - 1 ID=cds.g2872.t1;Parent=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS exon 723 1230 . - . ID=g2872.t1.exon2;Parent=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS CDS 723 1230 . - 0 ID=cds.g2872.t1;Parent=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS exon 1 565 . - . ID=g2872.t1.exon3;Parent=g2872.t1 NODE_4422_length_1643_cov_90.5893_potentialcontaminant AUGUSTUS CDS 1 565 . - 2 ID=cds.g2872.t1;Parent=g2872.t1 #PROT g2872.t1 g2872 VNITSSTFRDTSCGGDVYNNYGSGDYFGGSAVHFEDSSLFVSASTFRSNSAYMGGGAIGVYRSNLNVANSIFLGNEANSFGGAIFFLPDNVLYTTFEVSGSTFFRNYVFESEDDGSQFGSGGAIYVAVYISDDKQAQAQPYPVTITDSVFDSNEALPLGDGGAFWSDAWIDLRISRTKFTHNKGFWGGAVNLSSRTNFVTLEDVLATNNDGVEGGFANIDSVDTTVTNCHFINNKARLGGGFDVKGGPFKSTGSEYIQNSALEEGGAIYATIGSDGEISISLTRDDITSNTANERGGGIALYHNKRFTPGDPYAQFDTVTFSNNYAFMGGALSVGGLTFANDRVSGKPADPADVNTTVTVNVSTFKGNSGSTGGALFLSSYVVMYVQSTAFLNNVAQKGGVSYQAGNSRLHLLYSSIANNSASLGGVSLVDDA # ORIGINAL: g11452.t1 original gene structure, not modified by PASA NODE_1893_length_8706_cov_43.5699 AUGUSTUS gene 115 1151 . - . ID=g11452;Name=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS mRNA 115 1151 . - . ID=g11452.t1;Parent=g11452;Name=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 986 1151 . - . ID=g11452.t1.exon1;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 986 1151 . - 0 ID=cds.g11452.t1;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 781 846 . - . ID=g11452.t1.exon2;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 781 846 . - 2 ID=cds.g11452.t1;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 575 663 . - . ID=g11452.t1.exon3;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 575 663 . - 2 ID=cds.g11452.t1;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 115 213 . - . ID=g11452.t1.exon4;Parent=g11452.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 115 213 . - 0 ID=cds.g11452.t1;Parent=g11452.t1 #PROT g11452.t1 g11452 MASRTLGGLRRIVSGGLRASEGGVRLNTTSTSAPFLRCFSLWRSSTAVASSFGRADARTVKATAAVLMCHQRGFHATRSEASSTDYYKVLGVSKSASQADIKKAYYQVLGDEAKRKQYDEYGTAGPEQQHGGFGGFGGG* # ORIGINAL: g11453.t1 original gene structure, not modified by PASA NODE_1893_length_8706_cov_43.5699 AUGUSTUS gene 1753 3591 . + . ID=g11453;Name=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS mRNA 1753 3591 . + . ID=g11453.t1;Parent=g11453;Name=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 1753 1959 . + . ID=g11453.t1.exon1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 1753 1959 . + 0 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 2070 2195 . + . ID=g11453.t1.exon2;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 2070 2195 . + 0 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 2295 2412 . + . ID=g11453.t1.exon3;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 2295 2412 . + 0 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 2524 2623 . + . ID=g11453.t1.exon4;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 2524 2623 . + 2 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 2766 2890 . + . ID=g11453.t1.exon5;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 2766 2890 . + 1 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 3113 3213 . + . ID=g11453.t1.exon6;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 3113 3213 . + 2 ID=cds.g11453.t1;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 3391 3591 . + . ID=g11453.t1.exon7;Parent=g11453.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 3391 3591 . + 0 ID=cds.g11453.t1;Parent=g11453.t1 #PROT g11453.t1 g11453 MAFAEHQDAHLLAPHKHIKYVHPVKRIHRPEDVSKWQQSEAHHKLVSFILFLNDSVKGKKVSDPYPVSPIIDKLIALLDTLDKWVDEIPPIQQPMRFGNKAFRLWFAKVNENAAHLVRDILPHETQEAAIEIAPYLVESIGNQTRIDYGTGHEASFAAFLAALALVNAVAETDGTALVLRVFDRYLKLMRKVQKTYALEPAGSHGVWGLDDYQFLPFVWGSSQLLDNKDEIQPAHYLEPAALAKHEDYIFLGAIKFILEMKRGPFHEHSPILYDITGVPTWQKANQGLVRMYNVEVLSKFPVIQHFLFGTLFPANWESHSSVETK* # PASA_UPDATE: g11454.t1, single gene model update, valid-1, status:[pasa:asmbl_2936,status:12], valid-1 NODE_1893_length_8706_cov_43.5699 . gene 3665 6258 . - . ID=g11454;Name=g11454.t1 NODE_1893_length_8706_cov_43.5699 . mRNA 3665 6258 . - . ID=g11454.t1;Parent=g11454;Name=g11454.t1 NODE_1893_length_8706_cov_43.5699 . five_prime_UTR 6249 6258 . - . ID=g11454.t1.utr5p1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 5734 6258 . - . ID=g11454.t1.exon1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 5734 6248 . - 0 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 5493 5622 . - . ID=g11454.t1.exon2;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 5493 5622 . - 1 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 5202 5337 . - . ID=g11454.t1.exon3;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 5202 5337 . - 0 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 4880 5001 . - . ID=g11454.t1.exon4;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 4880 5001 . - 2 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 4624 4724 . - . ID=g11454.t1.exon5;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 4624 4724 . - 0 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 4336 4450 . - . ID=g11454.t1.exon6;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 4336 4450 . - 1 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 3979 4202 . - . ID=g11454.t1.exon7;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 3979 4202 . - 0 ID=cds.g11454.t1;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . exon 3665 3683 . - . ID=g11454.t1.exon8;Parent=g11454.t1 NODE_1893_length_8706_cov_43.5699 . CDS 3665 3683 . - 1 ID=cds.g11454.t1;Parent=g11454.t1 #PROT g11454.t1 g11454 MMATAVDAAPLVDARSYESPKRDPPPPSSSAEPSSLLQQPSQVPPPQSLITTAVDVVGPLSANIVIPLNLTSTPTSPASSLAPPSDADNAHVASSTLGPSHSTASQVGNIANESSSSTGSTGSTGSRAGESNSSSGTAAVRRTADGRAVPYLEPPVSSFEFEWRRADAVLKRARLNASKPPPPPLRVSQLDALRLDHELMLLLKAQFSKIFTFFKQSRVERMDPELNMLLQLLIYWLSVYKSDATYGQSLLNLKYGISVEDPRPITQRRKALQCALMVCGPWLWSRMNNALVAHGWIDRDDDDWRRKVWIALDYGEKAFRVASLLNLFAFLYDGKHHTLVDRLLGIRLVHARRLRRVVSFEFMDRQLLWNGFAELLLFLIPLINIQKIKTHVVRSLFPNSGVDGAASILSATACGICFADPANTPYVAIPCSHVHCYYCIKSNCMADRWLDTP* # ORIGINAL: g11455.t1 original gene structure, not modified by PASA NODE_1893_length_8706_cov_43.5699 AUGUSTUS gene 6901 8645 . + . ID=g11455;Name=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS mRNA 6901 8645 . + . ID=g11455.t1;Parent=g11455;Name=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 6901 6952 . + . ID=g11455.t1.exon1;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 6901 6952 . + 0 ID=cds.g11455.t1;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 7157 7234 . + . ID=g11455.t1.exon2;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 7157 7234 . + 2 ID=cds.g11455.t1;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 7420 7796 . + . ID=g11455.t1.exon3;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 7420 7796 . + 2 ID=cds.g11455.t1;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 8006 8365 . + . ID=g11455.t1.exon4;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 8006 8365 . + 0 ID=cds.g11455.t1;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS exon 8571 8645 . + . ID=g11455.t1.exon5;Parent=g11455.t1 NODE_1893_length_8706_cov_43.5699 AUGUSTUS CDS 8571 8645 . + 0 ID=cds.g11455.t1;Parent=g11455.t1 #PROT g11455.t1 g11455 MAKKEEARAAKASRKAEANLRRSSEPPKEETPTKTATQPSSDQKVRRRNSQQNRRSSLASAKSTPTREYTHIDGGSRPPSRGPSRAPTSDGGLTDASDGGNSDGGSSESESENVSGTEAVRGLASQEGPAVGGPYFDLNAVSTCLLSNDTVIAHPQRSKTHVIAMGPTETLCFLGELSLTVLRGSVSILGHIVLPGHTHTLSLAATASIPAVHAAPTPHALCHSALSPEMLSHIDACAGLPNAHTLFASRPHFAASAAVVMVEEHSSPAFASVSGVPSYRAACAYDVAKSPADAYGGSAASLFSASTFGIVSK* # PASA_UPDATE: g3355.t1, single gene model update, valid-1, status:[pasa:asmbl_1920,status:3], valid-1 NODE_1543_length_10569_cov_42.0917 . gene 6427 9910 . + . ID=g3355;Name=g3355.t1 NODE_1543_length_10569_cov_42.0917 . mRNA 6427 9910 . + . ID=g3355.t1;Parent=g3355;Name=g3355.t1 NODE_1543_length_10569_cov_42.0917 . five_prime_UTR 6427 6572 . + . ID=g3355.t1.utr5p1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . five_prime_UTR 6784 6854 . + . ID=g3355.t1.utr5p2;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 6427 6572 . + . ID=g3355.t1.exon1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 6784 7049 . + . ID=g3355.t1.exon2;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 6855 7049 . + 0 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 7300 7415 . + . ID=g3355.t1.exon3;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 7300 7415 . + 0 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 7569 7665 . + . ID=g3355.t1.exon4;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 7569 7665 . + 1 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 7925 8095 . + . ID=g3355.t1.exon5;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 7925 8095 . + 0 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 8347 8475 . + . ID=g3355.t1.exon6;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 8347 8475 . + 0 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 8634 8734 . + . ID=g3355.t1.exon7;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 8634 8734 . + 0 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . exon 8930 9910 . + . ID=g3355.t1.exon8;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . CDS 8930 9602 . + 1 ID=cds.g3355.t1;Parent=g3355.t1 NODE_1543_length_10569_cov_42.0917 . three_prime_UTR 9603 9910 . + . ID=g3355.t1.utr3p1;Parent=g3355.t1 #PROT g3355.t1 g3355 MTSVRSVNRMNCAFDVDISDLVEQRETWPAVAIRLERHARKKECARVVNATDIEARLDAARERREEILDRRRSGLTNVIELALLRSEEQERERRERWMRKIHLRELLAASTRRELARQRTAEIERHRERAVTVQQHERMRTEEFRDRARKLDFELNYASMLREKRRVAKIDRCREEVKKVREHVERRRDMDRKAIMSRIALLEDELAKAEEARSAMEGERVRKCRNLATKPAPSVRGERAGQCVARMTTEAMRSFREELEQKMLEATLRRQKALDERAGHAKDDLRRVTVIRTSGQPRQPIGVHSRTAWGSKPRYPVTPTITDDDKCAPALAFSGILDGSRRMSLREKKCPALALAMANSALGLGGCGNGSRDDDHCGEDGLDDDAHLTDEACGFSADTQCEPSGYVPPAPVLPLASLHHGRRHTHEMTPSLVAIDSFENITMEELQVDGGEAVANDAKECIKTDVAEQATETVAPAQADGIVDWALKLFYIR* # ORIGINAL: g3354.t1 original gene structure, not modified by PASA NODE_1543_length_10569_cov_42.0917 AUGUSTUS gene 410 4368 . - . ID=g3354;Name=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS mRNA 410 4368 . - . ID=g3354.t1;Parent=g3354;Name=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 4338 4368 . - . ID=g3354.t1.exon1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 4338 4368 . - 0 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 3865 4092 . - . ID=g3354.t1.exon2;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 3865 4092 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 3434 3475 . - . ID=g3354.t1.exon3;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 3434 3475 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 2911 3029 . - . ID=g3354.t1.exon4;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 2911 3029 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 2427 2601 . - . ID=g3354.t1.exon5;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 2427 2601 . - 0 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 1927 2124 . - . ID=g3354.t1.exon6;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 1927 2124 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 1579 1641 . - . ID=g3354.t1.exon7;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 1579 1641 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 1086 1191 . - . ID=g3354.t1.exon8;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 1086 1191 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 749 867 . - . ID=g3354.t1.exon9;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 749 867 . - 1 ID=cds.g3354.t1;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS exon 410 621 . - . ID=g3354.t1.exon10;Parent=g3354.t1 NODE_1543_length_10569_cov_42.0917 AUGUSTUS CDS 410 621 . - 2 ID=cds.g3354.t1;Parent=g3354.t1 #PROT g3354.t1 g3354 MKRPREDSVQALVEAHIGIHFGEEDAAAVLSNNNKHDAIPTNLATVHGGTGSSSGLVHIQIPRGQKEEVGAVAKRQKSSDATEKPPPGYRRCTHQHCLELVPNISWDSHMYKHAKEVKEARRIEELLIAKRGTESAGAEKAASTESSSIVQSEYARQYVSGLSREVERNKMTPTQFEEKKASLYEALQCGKMQEEKTFGVVSCIRQRFSKALLRGSKVTALFSCDTDHYSQTLGDRGWGCGYRNFQMIASALLRIPLYRVHMFGGSNAVPSIFKIQEAIEAAWKAGFDVDGAEQLGHKLVHTKKWIGTTEICALLRSFHIRCRVWEFIRETGKDHADLLTWAKDYFADKPDQPPLYFQHQGHSRVIVGHCLDAGVDRLLVLDPAHVPRTVANVCNGTGDLRPILKAVSNFSKPEFQVLEIGGVMESSAEVE # PASA_UPDATE: g5901.t1, single gene model update, valid-1, status:[pasa:asmbl_7279,status:3], valid-1 NODE_439_length_23764_cov_36.5897 . gene 8960 15327 . + . ID=g5901;Name=g5901.t1 NODE_439_length_23764_cov_36.5897 . mRNA 8960 15327 . + . ID=g5901.t1;Parent=g5901;Name=g5901.t1 NODE_439_length_23764_cov_36.5897 . five_prime_UTR 8960 8992 . + . ID=g5901.t1.utr5p1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 8960 9052 . + . ID=g5901.t1.exon1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 8993 9052 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 9237 9460 . + . ID=g5901.t1.exon2;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 9237 9460 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 9695 9737 . + . ID=g5901.t1.exon3;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 9695 9737 . + 1 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 9906 9998 . + . ID=g5901.t1.exon4;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 9906 9998 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 10327 10476 . + . ID=g5901.t1.exon5;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 10327 10476 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 10670 10837 . + . ID=g5901.t1.exon6;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 10670 10837 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 11202 11309 . + . ID=g5901.t1.exon7;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 11202 11309 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 11799 11906 . + . ID=g5901.t1.exon8;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 11799 11906 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 12139 12151 . + . ID=g5901.t1.exon9;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 12139 12151 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 12666 12760 . + . ID=g5901.t1.exon10;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 12666 12760 . + 2 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 13024 13072 . + . ID=g5901.t1.exon11;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 13024 13072 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 13293 13365 . + . ID=g5901.t1.exon12;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 13293 13365 . + 2 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 13693 13768 . + . ID=g5901.t1.exon13;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 13693 13768 . + 1 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 14230 14319 . + . ID=g5901.t1.exon14;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 14230 14319 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 14658 14735 . + . ID=g5901.t1.exon15;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 14658 14735 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . exon 14951 15327 . + . ID=g5901.t1.exon16;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . CDS 14951 15088 . + 0 ID=cds.g5901.t1;Parent=g5901.t1 NODE_439_length_23764_cov_36.5897 . three_prime_UTR 15089 15327 . + . ID=g5901.t1.utr3p1;Parent=g5901.t1 #PROT g5901.t1 g5901 MASLTRILSARTAVNGALAQRARAALHTTAVAMNAGTARQKTMFFDNPVDAVRDIPNGAKVLVGGFGLCGIPENLIEALQKTAQTDLTVVSNNAGVDDFGLGKLLKTRQIKRMVSSYVGENAEFARQYLSGELEVELTPQGTLAERIRAGGAGIPAFFTPTAYGTMIHTGGVPIKYNKDKTIAIHSKPREARSFNGIDYIMEEAITGDYSIVKAWKADGVGNLVFNKSARNFNAPMARAAKITIAEVEEIVPTGSLSPDEIHVPGVYVHRVFKGAAFDKRIERLTLRDDSGKVNSPLKKNKDAESRERIVRRAAAEFKDGMYINLGIGIPMLASNYIQPNTQVYLMSENGILGLGPFPRPGEQDPDLINAGKETVTVIPGASFFASDDSFAMIRGGHIDVTVLGAMQVSARGDLANWMIPGKMVKGMGGAMDLVASPGTKVVVTMEHTAKGEHKIIQECTLPLTGRHCVDMIITEMCVFNVHPTDGLTLVEIASDTTVDEVRSATGAPFKVALDLKPMQQA* # ORIGINAL: g5896.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 2 397 . + . ID=g5896;Name=g5896.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 2 397 . + . ID=g5896.t1;Parent=g5896;Name=g5896.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 2 397 . + . ID=g5896.t1.exon1;Parent=g5896.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 2 397 . + 0 ID=cds.g5896.t1;Parent=g5896.t1 #PROT g5896.t1 g5896 VAAAVSASAAAANADFAASVARVSATSVAQQSASSVASVASVASVVAVSASAATANAEFSSSVAAQQAASSASPVDAATSTAMAPAVSATATAVPTPTGAAQSAQEEWAQSMGAWQDSLAKWKRTSSGCGA* # ORIGINAL: g5899.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 4511 6383 . - . ID=g5899;Name=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 4511 6383 . - . ID=g5899.t1;Parent=g5899;Name=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 6189 6383 . - . ID=g5899.t1.exon1;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 6189 6383 . - 0 ID=cds.g5899.t1;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 5804 5902 . - . ID=g5899.t1.exon2;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 5804 5902 . - 0 ID=cds.g5899.t1;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 5074 5333 . - . ID=g5899.t1.exon3;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 5074 5333 . - 0 ID=cds.g5899.t1;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 4511 4787 . - . ID=g5899.t1.exon4;Parent=g5899.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 4511 4787 . - 1 ID=cds.g5899.t1;Parent=g5899.t1 #PROT g5899.t1 g5899 MAGVRAPACVGDALSSVETPVLLVDLDALEANVRVLKSTLGSHAERIALRPHAKAHKCSAIARLQVSMGGAVGVCCQKVSEAEAMVSGGVTNVHLSNEVVCPKKLLRLASLARAARVSICVDSVEGILRLEDACAVIGTRIAALVEIDVGQMRCGVEPGEPAVALARTIAACPHLCFAGLQAYHGSNQHIRTAAERAAVVDAVCGHVRATTVALASAGIECTFVTGGGTGSYLAEVASGLFSEIQPISTACHHSTQCLLVFVCFVESMGTVPKTMT* # PASA_UPDATE: g5904.t1, single gene model update, valid-1, status:[pasa:asmbl_7277,status:3], valid-1 NODE_439_length_23764_cov_36.5897 . gene 20112 21264 . + . ID=g5904;Name=g5904.t1 NODE_439_length_23764_cov_36.5897 . mRNA 20112 21264 . + . ID=g5904.t1;Parent=g5904;Name=g5904.t1 NODE_439_length_23764_cov_36.5897 . five_prime_UTR 20112 20237 . + . ID=g5904.t1.utr5p1;Parent=g5904.t1 NODE_439_length_23764_cov_36.5897 . exon 20112 21264 . + . ID=g5904.t1.exon1;Parent=g5904.t1 NODE_439_length_23764_cov_36.5897 . CDS 20238 20999 . + 0 ID=cds.g5904.t1;Parent=g5904.t1 NODE_439_length_23764_cov_36.5897 . three_prime_UTR 21000 21264 . + . ID=g5904.t1.utr3p1;Parent=g5904.t1 #PROT g5904.t1 g5904 MALNRPVAVALCFAAVMLCACSGAAAQHTYWVSAYKTGGCTGDVAWTPIQVPALTCVNVCNGVPTTDTCTSGFTSAFVVSGDNDVAATIQYACDSLCANCRQTATVDGNTCYTSLNFTGTNAVGTVGSLIVSFNTRAELIGGLLFSDTGCGHTANKFTAVNSGTCAFFYSSGGLGGQSFVINAIGSNLALVGPWTSGDCSGTPSQMSVGVLPSCLEISGPVPYSVYAVSDGTSVAVGTVVSLVAVVASLLLLL* # PASA_UPDATE: g5903.t1, single gene model update, valid-1, status:[pasa:asmbl_7276,status:12], valid-1 NODE_439_length_23764_cov_36.5897 . gene 18102 19626 . - . ID=g5903;Name=g5903.t1 NODE_439_length_23764_cov_36.5897 . mRNA 18102 19626 . - . ID=g5903.t1;Parent=g5903;Name=g5903.t1 NODE_439_length_23764_cov_36.5897 . five_prime_UTR 19610 19626 . - . ID=g5903.t1.utr5p1;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . exon 19485 19626 . - . ID=g5903.t1.exon1;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . CDS 19485 19609 . - 0 ID=cds.g5903.t1;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . exon 19109 19172 . - . ID=g5903.t1.exon2;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . CDS 19109 19172 . - 1 ID=cds.g5903.t1;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . exon 18102 18891 . - . ID=g5903.t1.exon3;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . CDS 18322 18891 . - 0 ID=cds.g5903.t1;Parent=g5903.t1 NODE_439_length_23764_cov_36.5897 . three_prime_UTR 18102 18321 . - . ID=g5903.t1.utr3p1;Parent=g5903.t1 #PROT g5903.t1 g5903 MEDFWTAVAATGANALFASVTAGGVRYLCFTGGDRAAGWRVGATDGLDLVWTGVFTGDKLQEHRKGGATWFDLFARICSQFGKGQTLLSLSGDGRTATVDVAGDKSLAFELAVLERAASRSAVRDLLFRLADVATSAAGAPAAQSLSLSQHHTTGTQPSHSMSPGSQGSVALFASQPSAPQISPKKLFQGASAEEHVTRRAPAAAVAPAPKRKAGYSVINPTVKRRQAGGIKFAGGGGGAGGGGDDETTGAD* # ORIGINAL: g5898.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 3424 4175 . - . ID=g5898;Name=g5898.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 3424 4175 . - . ID=g5898.t1;Parent=g5898;Name=g5898.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 4022 4175 . - . ID=g5898.t1.exon1;Parent=g5898.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 4022 4175 . - 0 ID=cds.g5898.t1;Parent=g5898.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 3424 3683 . - . ID=g5898.t1.exon2;Parent=g5898.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 3424 3683 . - 2 ID=cds.g5898.t1;Parent=g5898.t1 #PROT g5898.t1 g5898 MDADYARNKDASGQPFLQFAPSLSILATVMSRPVAARAVVDVGTKAHSMDSGPPEVLDLSGRAMDNVMYICGGDEHGILAKNGSGPSEWFDSLGVGDRVRLFPGHCDPTVNLYDWIVGVRGGIVESVWPIDGRGPGL* # PASA_UPDATE: g5897.t1, single gene model update, valid-1, status:[pasa:asmbl_7278,status:3], valid-1 NODE_439_length_23764_cov_36.5897 . gene 622 2712 . + . ID=g5897;Name=g5897.t1 NODE_439_length_23764_cov_36.5897 . mRNA 622 2712 . + . ID=g5897.t1;Parent=g5897;Name=g5897.t1 NODE_439_length_23764_cov_36.5897 . five_prime_UTR 622 900 . + . ID=g5897.t1.utr5p1;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . exon 622 1048 . + . ID=g5897.t1.exon1;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . CDS 901 1048 . + 0 ID=cds.g5897.t1;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . exon 1319 2162 . + . ID=g5897.t1.exon2;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . CDS 1319 2162 . + 2 ID=cds.g5897.t1;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . exon 2489 2712 . + . ID=g5897.t1.exon3;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . CDS 2489 2651 . + 1 ID=cds.g5897.t1;Parent=g5897.t1 NODE_439_length_23764_cov_36.5897 . three_prime_UTR 2652 2712 . + . ID=g5897.t1.utr3p1;Parent=g5897.t1 #PROT g5897.t1 g5897 MQVDEQLYDSVYGCALLTSGGAVAVTHLMRSRMSEGVEDLARTHRLHPEDEVLRLAALYGRLSVGGASTGTCRAALLSAETLAMGTDRRALRRALSGDPSVFVHPRTNDVTTDAPSQAESREAAQIASSAACAGVNVVSASAALDAPFVCAGMDEAPHTASCAGQDARWQGVDDVRCGTASRGRGDGEHGAQKTEAVAEACARLSVGTDGRDSPEQNVAQNVLVSRDHVLPRPPVRASRKRQHTAPSPVPLGPGDNENGHGVIASAAHSGDVFALGDIRAALPREEHVLLGMARRAGVRMAASGSAASAAVLVSSAPQQLRRTVIQSDLVRPPAEFSYGDGGLSFPTDDCDEDGSSGFSDELSFLVKRVKMSENDADSFMPYIL* # ORIGINAL: g5902.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 16117 17649 . + . ID=g5902;Name=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 16117 17649 . + . ID=g5902.t1;Parent=g5902;Name=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 16117 16264 . + . ID=g5902.t1.exon1;Parent=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 16117 16264 . + 0 ID=cds.g5902.t1;Parent=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 16756 16989 . + . ID=g5902.t1.exon2;Parent=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 16756 16989 . + 2 ID=cds.g5902.t1;Parent=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 17144 17649 . + . ID=g5902.t1.exon3;Parent=g5902.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 17144 17649 . + 2 ID=cds.g5902.t1;Parent=g5902.t1 #PROT g5902.t1 g5902 MCYDLEIFLQPVSQELICPINQGVLENSVCGPCDHVFCDGCVRPWIVRHGRCPVCRASFGPEKLRAAPPIVRGLLAELSVRCRNFTDGCTERLSLGTRDRHAESACKFETCLCPHKCDVGRIPRRFLDAHVENCSMAPMLCAKGCGLSMTRFSARNHDCVDALRAHAATLEAQLRASQQESENLRRQVETLTRRMAEGGHGGSGGGGGGHGHGHSHGHSHGQHGHSHGPSPQSPQSPQSSQSSQSPRSQTSQGQGGNGTARGQGGGNTARRQQSSASDANGEYGIFGEFMGMFQR* # ORIGINAL: g5905.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 22760 23764 . - . ID=g5905;Name=g5905.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 22760 23764 . - . ID=g5905.t1;Parent=g5905;Name=g5905.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 23265 23764 . - . ID=g5905.t1.exon1;Parent=g5905.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 23265 23764 . - 1 ID=cds.g5905.t1;Parent=g5905.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 22760 23157 . - . ID=g5905.t1.exon2;Parent=g5905.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 22760 23157 . - 2 ID=cds.g5905.t1;Parent=g5905.t1 #PROT g5905.t1 g5905 RRRVVLCQAVVHAPCNLPATFRRRVILCQAVVHAPCNLPATVRRRVILCQGVVHAPCNLQATVRRRVILCQAVVHAPCNLQATFRRRVVLCQAVVHVPCNLQATFRRRVVLCQAVVHAPCNLPATFRRRVVLCQAVVHAPCNLQATFRRRVVLCHHAPCNLQATFCWCDNFSASESCTQSPVCCEFHGCSPMHRRQMGHIRICLRADHVPSRCGSGGHRRRGEVVLAISPCVNRHCSGDAGGRSLFIIPHGDRPGRQIRWRRRAACSQQRCRHSAIRAHPRARSVACSRAAGGRGLLGL # ORIGINAL: g5900.t1 original gene structure, not modified by PASA NODE_439_length_23764_cov_36.5897 AUGUSTUS gene 7042 8312 . - . ID=g5900;Name=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS mRNA 7042 8312 . - . ID=g5900.t1;Parent=g5900;Name=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 8084 8312 . - . ID=g5900.t1.exon1;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 8084 8312 . - 0 ID=cds.g5900.t1;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 7629 7786 . - . ID=g5900.t1.exon2;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 7629 7786 . - 2 ID=cds.g5900.t1;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 7336 7455 . - . ID=g5900.t1.exon3;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 7336 7455 . - 0 ID=cds.g5900.t1;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS exon 7042 7140 . - . ID=g5900.t1.exon4;Parent=g5900.t1 NODE_439_length_23764_cov_36.5897 AUGUSTUS CDS 7042 7140 . - 0 ID=cds.g5900.t1;Parent=g5900.t1 #PROT g5900.t1 g5900 MAAAPPTNKMSIPILVDGHLAVGPAIVAGQPANAADIAYSVADVDYRTGQLQASIVPGLNTIIANAQARESEVRVACINAVPTAIANLSTTMNDMRVTIRASTGNTLIIRGGNTPNIPELEEQLYPVPREEPGSAAIPIGTVPGYMGSQNAHAVFPKNLTELQGLTNAQLNALEAFYGIPFARGAAVQSRRQRFTLFIMGA* # PASA_UPDATE: g12218.t1, single gene model update, valid-1, status:[pasa:asmbl_5082,status:3], valid-1 NODE_2824_length_5049_cov_69.2295 . gene 337 3686 . + . ID=g12218;Name=g12218.t1 NODE_2824_length_5049_cov_69.2295 . mRNA 337 3686 . + . ID=g12218.t1;Parent=g12218;Name=g12218.t1 NODE_2824_length_5049_cov_69.2295 . five_prime_UTR 337 521 . + . ID=g12218.t1.utr5p1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 337 576 . + . ID=g12218.t1.exon1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 522 576 . + 0 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 937 1019 . + . ID=g12218.t1.exon2;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 937 1019 . + 2 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 1436 1553 . + . ID=g12218.t1.exon3;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 1436 1553 . + 0 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 1959 2003 . + . ID=g12218.t1.exon4;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 1959 2003 . + 2 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 2475 2551 . + . ID=g12218.t1.exon5;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 2475 2551 . + 2 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 2853 2948 . + . ID=g12218.t1.exon6;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 2853 2948 . + 0 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . exon 3177 3686 . + . ID=g12218.t1.exon7;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . CDS 3177 3287 . + 0 ID=cds.g12218.t1;Parent=g12218.t1 NODE_2824_length_5049_cov_69.2295 . three_prime_UTR 3288 3686 . + . ID=g12218.t1.utr3p1;Parent=g12218.t1 #PROT g12218.t1 g12218 MGNVNRKRELEEFKGKTHFSEKELKLLQARFHTLGGTTINKPQFRKVIREALSGDWTNATVFLERLFDAFDVNHDHSIDFREFIHGLNIFLKGTPQEKLELSFRMYDIDRNGYIDREELFQIMSNVYTLYYKDDNREYIRAMVNRIFEDLDVNDDGQLSMTEFKLATLKEPLILDFLNECLRTPTEARERAATA* # ORIGINAL: g3388.t1 original gene structure, not modified by PASA NODE_4018_length_2336_cov_43.6758 AUGUSTUS gene 1622 1929 . + . ID=g3388;Name=g3388.t1 NODE_4018_length_2336_cov_43.6758 AUGUSTUS mRNA 1622 1929 . + . ID=g3388.t1;Parent=g3388;Name=g3388.t1 NODE_4018_length_2336_cov_43.6758 AUGUSTUS exon 1622 1646 . + . ID=g3388.t1.exon1;Parent=g3388.t1 NODE_4018_length_2336_cov_43.6758 AUGUSTUS CDS 1622 1646 . + 0 ID=cds.g3388.t1;Parent=g3388.t1 NODE_4018_length_2336_cov_43.6758 AUGUSTUS exon 1727 1929 . + . ID=g3388.t1.exon2;Parent=g3388.t1 NODE_4018_length_2336_cov_43.6758 AUGUSTUS CDS 1727 1929 . + 2 ID=cds.g3388.t1;Parent=g3388.t1 #PROT g3388.t1 g3388 MVTHHSKYVTTGATKSRKQKGRENNEVAEPMNKRKKDANLLDPRDGEEDEVAKDKGKAVESRKRKRDEAANESKP* # PASA_UPDATE: g11616.t1, single gene model update, valid-1, status:[pasa:asmbl_2300,status:3], valid-1 NODE_1673_length_9848_cov_47.6297 . gene 6108 8904 . - . ID=g11616;Name=g11616.t1 NODE_1673_length_9848_cov_47.6297 . mRNA 6108 8904 . - . ID=g11616.t1;Parent=g11616;Name=g11616.t1 NODE_1673_length_9848_cov_47.6297 . five_prime_UTR 8580 8904 . - . ID=g11616.t1.utr5p1;Parent=g11616.t1 NODE_1673_length_9848_cov_47.6297 . five_prime_UTR 7870 8175 . - . ID=g11616.t1.utr5p2;Parent=g11616.t1 NODE_1673_length_9848_cov_47.6297 . exon 8580 8904 . - . ID=g11616.t1.exon1;Parent=g11616.t1 NODE_1673_length_9848_cov_47.6297 . exon 6108 8175 . - . ID=g11616.t1.exon2;Parent=g11616.t1 NODE_1673_length_9848_cov_47.6297 . CDS 6670 7869 . - 0 ID=cds.g11616.t1;Parent=g11616.t1 NODE_1673_length_9848_cov_47.6297 . three_prime_UTR 6108 6669 . - . ID=g11616.t1.utr3p1;Parent=g11616.t1 #PROT g11616.t1 g11616 MVLRNKAFHVVDRTVFADVSCDIGYFTSDGGHYQIQATNSVPEEYRLDVSASTERGEKRYVCLTCFRENPTAVSLLAFTSTRNHAAIHAPREQWSLCPFQNCGMAFPQQQSVSRHYSNIHRKERVPLVDQKCGVVKKEGRSKRESKLREMVKAEADALPQKWALQVSIKGEIKEKEKPAVGMFATDKHMALSYVPKFEETGCDGVKMEPTMPTDDSTNDSYDDKLAEYGMSALKASLRMDPLSPELLEKIMLENLSDTNDKYAFGRLGEADEADETHHAVDAAHTAGDGVCANAPKGYTIHADLPLTDNPAEPILHNFDGGWESFWSTPFMSGGAEDTHGSFLADSAFITVEVAELMPPPFGPATSINLIASPSICSTVTNMGALEQEVCDAGEDFSLL* # PASA_UPDATE: g11614.t1, single gene model update, valid-1, status:[pasa:asmbl_2299,status:12], valid-1 NODE_1673_length_9848_cov_47.6297 . gene 212 2515 . - . ID=g11614;Name=g11614.t1 NODE_1673_length_9848_cov_47.6297 . mRNA 212 2515 . - . ID=g11614.t1;Parent=g11614;Name=g11614.t1 NODE_1673_length_9848_cov_47.6297 . five_prime_UTR 2333 2515 . - . ID=g11614.t1.utr5p1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . exon 2145 2515 . - . ID=g11614.t1.exon1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . CDS 2145 2332 . - 0 ID=cds.g11614.t1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . exon 1456 1973 . - . ID=g11614.t1.exon2;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . CDS 1456 1973 . - 1 ID=cds.g11614.t1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . exon 1225 1275 . - . ID=g11614.t1.exon3;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . CDS 1225 1275 . - 2 ID=cds.g11614.t1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . exon 866 1003 . - . ID=g11614.t1.exon4;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . CDS 866 1003 . - 2 ID=cds.g11614.t1;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . exon 212 382 . - . ID=g11614.t1.exon5;Parent=g11614.t1 NODE_1673_length_9848_cov_47.6297 . CDS 212 382 . - 2 ID=cds.g11614.t1;Parent=g11614.t1;3_prime_partial=true #PROT g11614.t1 g11614 MGAPSLCDECARDGFPGHNAARQDHVECLKEYYKDNAHPVNLAGPEDKYTPLHWAALKGHVQSVRALLWLGAAVDSLEKSGWSPLHLACMRGHDPVVKILVVHGANAELVDKRNSTAIHKAASAGSLSCLQTLLKRNPRIDMRDSLGWMPIHCAAFSGRLSCIQYLHRCGASVIEADEVGDTPLHLAVSEGYGECAKLLMTMGADATAKNTDGETARDVAGRLGQDEVLTHLDLFEIEQKIARLQAGLEEYDDESIGPCDACHSTHYSVHAAAYSGHLLCLRREVAWHNGDISAVDDEGFQPIHRAAGAGHLHCIRWLLSQGVYAFARTREELKTPRDLARENRHFDCVEFLPQN # ORIGINAL: g11615.t1 original gene structure, not modified by PASA NODE_1673_length_9848_cov_47.6297 AUGUSTUS gene 2920 5878 . + . ID=g11615;Name=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS mRNA 2920 5878 . + . ID=g11615.t1;Parent=g11615;Name=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 2920 3100 . + . ID=g11615.t1.exon1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 2920 3100 . + 0 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 3204 3283 . + . ID=g11615.t1.exon2;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 3204 3283 . + 2 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 3461 3583 . + . ID=g11615.t1.exon3;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 3461 3583 . + 0 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 3825 3974 . + . ID=g11615.t1.exon4;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 3825 3974 . + 0 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 4216 4660 . + . ID=g11615.t1.exon5;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 4216 4660 . + 0 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 4979 5086 . + . ID=g11615.t1.exon6;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 4979 5086 . + 2 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 5198 5344 . + . ID=g11615.t1.exon7;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 5198 5344 . + 2 ID=cds.g11615.t1;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS exon 5676 5878 . + . ID=g11615.t1.exon8;Parent=g11615.t1 NODE_1673_length_9848_cov_47.6297 AUGUSTUS CDS 5676 5878 . + 2 ID=cds.g11615.t1;Parent=g11615.t1 #PROT g11615.t1 g11615 MEAFESDPSEVRAAVGTRFIPGWSVCTTGTVASLVVPLFNYIPRKDYTEGGPHPAAKSLGARLRPESCLDLKSMLEQLESDVVYRETIEGHPWSVVSVLSPYARSLQLMIMETSADRYLPTPIWRTVTSTEGEAVASLLGSIVNVLVVRAEAAKETVHIGYNWSPRAWGTAEEKTGYQSVPTKWHAVAWTWPYLTEGVDGEGMSWRPITSLGGYLQSLFGDLSVNKYIPYLSVAMLSYVERYLAAAAQQRDNASKRRTFNLGKWRANRHGVECDVDVPMSVAMTSGTFYADALKPISVAVDALFVSISEAMTDMDCAAIDNILAKTSNGPLSDEDKAFVRKTPTLRSESDARARLGALGLPEGIADGLYDTLLDAVRRRCSEDGDPDDPVHGWWRKGFGYGIVFVTVPGQSSSHIRIMPGVHMGMGGTCETSGILISRPEDRFLSDAVTLQRSKLVWEFSELLTAQRTALGATGVIVN* # ORIGINAL: g49.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 20106 21099 . - . ID=g49;Name=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 20106 21099 . - . ID=g49.t1;Parent=g49;Name=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 20938 21099 . - . ID=g49.t1.exon1;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 20938 21099 . - 0 ID=cds.g49.t1;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 20730 20844 . - . ID=g49.t1.exon2;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 20730 20844 . - 0 ID=cds.g49.t1;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 20313 20504 . - . ID=g49.t1.exon3;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 20313 20504 . - 2 ID=cds.g49.t1;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 20106 20149 . - . ID=g49.t1.exon4;Parent=g49.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 20106 20149 . - 2 ID=cds.g49.t1;Parent=g49.t1 #PROT g49.t1 g49 MASLARKVENIGNAAARKKRQRPELTAEQKQEIKEAFELFDTNKDGFLDYYECKVALRALGFEDKKSDVQKIMTDHDRDASGRISFDDFFEVVADKILARNPRDELLRAFRLFDDDDSGRINLRKLRRIARELGENVSEEELQQWIDEFDTDGDGEINLEDFLSIMTADY* # PASA_UPDATE: g46.t1, single gene model update, valid-1, status:[pasa:asmbl_6408,status:3], valid-1 NODE_368_length_25752_cov_40.7379 . gene 10458 12857 . + . ID=g46;Name=g46.t1 NODE_368_length_25752_cov_40.7379 . mRNA 10458 12857 . + . ID=g46.t1;Parent=g46;Name=g46.t1 NODE_368_length_25752_cov_40.7379 . five_prime_UTR 10458 10480 . + . ID=g46.t1.utr5p1;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . exon 10458 10638 . + . ID=g46.t1.exon1;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . CDS 10481 10638 . + 0 ID=cds.g46.t1;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . exon 10931 12309 . + . ID=g46.t1.exon2;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . CDS 10931 12309 . + 1 ID=cds.g46.t1;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . exon 12454 12857 . + . ID=g46.t1.exon3;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . CDS 12454 12620 . + 2 ID=cds.g46.t1;Parent=g46.t1 NODE_368_length_25752_cov_40.7379 . three_prime_UTR 12621 12857 . + . ID=g46.t1.utr3p1;Parent=g46.t1 #PROT g46.t1 g46 MAAVARTSLEALVLFCKRRGFVFQSAEIYNGIKGCFDYGPLGIELKRNIANEWWRSMVHQRDDVVGVDTAIMSPRELWAASGHLELFNDRLADCLLSRDRFRADKAPLPNIGKDKRMCIRAPNPATATEWVERIRTMHAPGAAVERHGNDVILTCLEVHEPNESREGTLLLLAEDASSAPISIPYVGYVCPATNSPFVGKEWLFNAMFRTAMGAVDPVGAAVEAAIANRDKSPEEIRAAAAKAAAGGAVYLRPETAQGIFTQFLNVVNSTGRRPPFGIAQVGKAFRNEFSVEHFVFRSREFEQMEMEYFCDGGSGMRHMEFWTAERLSWWKTLLRHGDTRLRLVQHENKDLAHYARACTDIEFDFPFGWGELEGIAWRGDFDLRAHSKHSGARLCVPGGVDGEQDGSWTPHVIEPSAGLTRGFLAVLCDAFYADGSHVIHGTSGASGDNAAKSSGSALPRALLSLHPRLAPVKAAVLPLVKKDAQFMERAHVVHKALRKAGLPSQLSETGSVGRRYVAQDEIGTPCCITIDKTTLDDGTVTVRDRDTAEQRRIKMDDVVDHVSRLIA* # PASA_UPDATE: g48.t1, single gene model update, valid-1, status:[pasa:asmbl_6409,status:3], valid-1 NODE_368_length_25752_cov_40.7379 . gene 18122 19679 . + . ID=g48;Name=g48.t1 NODE_368_length_25752_cov_40.7379 . mRNA 18122 19679 . + . ID=g48.t1;Parent=g48;Name=g48.t1 NODE_368_length_25752_cov_40.7379 . five_prime_UTR 18122 18470 . + . ID=g48.t1.utr5p1;Parent=g48.t1 NODE_368_length_25752_cov_40.7379 . exon 18122 18785 . + . ID=g48.t1.exon1;Parent=g48.t1 NODE_368_length_25752_cov_40.7379 . CDS 18471 18785 . + 0 ID=cds.g48.t1;Parent=g48.t1 NODE_368_length_25752_cov_40.7379 . exon 19145 19679 . + . ID=g48.t1.exon2;Parent=g48.t1 NODE_368_length_25752_cov_40.7379 . CDS 19145 19483 . + 0 ID=cds.g48.t1;Parent=g48.t1 NODE_368_length_25752_cov_40.7379 . three_prime_UTR 19484 19679 . + . ID=g48.t1.utr3p1;Parent=g48.t1 #PROT g48.t1 g48 MLSRSHAPVKVEMAKARTLVAGHIGLAALCVCADWLVENRPRLSTRVWAPFDTAVHGVVAAAVWFLGHCSSGDRRALTGHVIACLFVACLMDLDHFIAAGSLKLEDALSLESRPFGHSLIFAALVATPIYVIGRIRESSWRLSLPLAVFVSLFSHQLRDAWRRGLWLGWNVTIVVPYWAYVVGIVLLPLIVRWLLNRIYALQAPKGFYKGGIFVQVA* # ORIGINAL: g50.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 21669 25627 . + . ID=g50;Name=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 21669 25627 . + . ID=g50.t1;Parent=g50;Name=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 21669 21771 . + . ID=g50.t1.exon1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 21669 21771 . + 0 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 21887 21972 . + . ID=g50.t1.exon2;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 21887 21972 . + 2 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 22082 22179 . + . ID=g50.t1.exon3;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 22082 22179 . + 0 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 22525 22642 . + . ID=g50.t1.exon4;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 22525 22642 . + 1 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 22809 22898 . + . ID=g50.t1.exon5;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 22809 22898 . + 0 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 23214 23337 . + . ID=g50.t1.exon6;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 23214 23337 . + 0 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 23648 23834 . + . ID=g50.t1.exon7;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 23648 23834 . + 2 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 24060 24181 . + . ID=g50.t1.exon8;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 24060 24181 . + 1 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 24306 24458 . + . ID=g50.t1.exon9;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 24306 24458 . + 2 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 24656 24792 . + . ID=g50.t1.exon10;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 24656 24792 . + 2 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 25067 25231 . + . ID=g50.t1.exon11;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 25067 25231 . + 0 ID=cds.g50.t1;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 25485 25627 . + . ID=g50.t1.exon12;Parent=g50.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 25485 25627 . + 0 ID=cds.g50.t1;Parent=g50.t1 #PROT g50.t1 g50 MSDKLTRVAIVSDDKCKPKKCRQECKKSCPVVRIGKLCIEVAPTAKISVISEELCIGCGICVKKCPFEAITIINLPSNLATSVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILANKEKPNLGRFDNPPQWEEILTYFRGSELQNFFTRILEDKIKAVIKPQYVDQIPRAAKGKVNDILTRKNERSEADSERFIKLLDLTNVLERDVEALSGGELQRFACAVACLQRAAVYMFDEPSSYLDVKQRLNAARVIRSLVEATNFVIVVEHDLSVLDYLSDFICVLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENLRFREVSLTFKMMENADNEEEIKKFYRNQYPKMVKTMGGFKLTVDAGDFTDSEIVVLLGENGTGKTTLIRMLAGLMPPDSADRIPVLNVSYKPQKISPTFEGSVRLLFHKKIRDAFVHPQFNTDVIKPLEIERLLDQEVKNLSGGELQRVAIILCLGQPADVYLIDEPSAYLDSEQRIVAAKVIK # ORIGINAL: g44.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 4603 6192 . + . ID=g44;Name=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 4603 6192 . + . ID=g44.t1;Parent=g44;Name=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 4603 4612 . + . ID=g44.t1.exon1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 4603 4612 . + 0 ID=cds.g44.t1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 4740 4834 . + . ID=g44.t1.exon2;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 4740 4834 . + 2 ID=cds.g44.t1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 4993 5296 . + . ID=g44.t1.exon3;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 4993 5296 . + 0 ID=cds.g44.t1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 5527 5639 . + . ID=g44.t1.exon4;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 5527 5639 . + 2 ID=cds.g44.t1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 5769 5927 . + . ID=g44.t1.exon5;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 5769 5927 . + 0 ID=cds.g44.t1;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 6124 6192 . + . ID=g44.t1.exon6;Parent=g44.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 6124 6192 . + 0 ID=cds.g44.t1;Parent=g44.t1 #PROT g44.t1 g44 MSWEDEDFEPVATKPVPAVRSAFDDEEEDDDNNVKESWDMSDDDDKPASKEGAAAAAAGGATSTAAVAKKKKKSWKQIAAEKEKEKLERKVDPFDNAEDRNRLLTPEEEAAEKLRRQKLIEEADLQNAKDLFSTGGEDAAPALTGDSIDTMRPKSAADFDKLEKAIAKKLGEYEHSVEYVPFLETLFRDLCAGVSSEDIRRIISVLNVLLNEKQKAEKGPANKGKKKAPPKKVVALDEDFVDGEYDDFM* # ORIGINAL: g45.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 6795 10043 . - . ID=g45;Name=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 6795 10043 . - . ID=g45.t1;Parent=g45;Name=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 10002 10043 . - . ID=g45.t1.exon1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 10002 10043 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 9280 9749 . - . ID=g45.t1.exon2;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 9280 9749 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 8897 8981 . - . ID=g45.t1.exon3;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 8897 8981 . - 1 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 8477 8602 . - . ID=g45.t1.exon4;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 8477 8602 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 8110 8265 . - . ID=g45.t1.exon5;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 8110 8265 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 7684 7797 . - . ID=g45.t1.exon6;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 7684 7797 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 7430 7546 . - . ID=g45.t1.exon7;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 7430 7546 . - 0 ID=cds.g45.t1;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 6795 6932 . - . ID=g45.t1.exon8;Parent=g45.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 6795 6932 . - 0 ID=cds.g45.t1;Parent=g45.t1 #PROT g45.t1 g45 MGRARQQSSPASAKVDGVIEVPTGGRNKTTFARKLAPAPITVNDAIASVPSSAPVAVTGLVAAAKSPRARGKAVKKDITADAGTNAHVAAHVSAVTPSAQPSVMPQRAPATKGRPPARRRRERSESSHDTSESDIAMTASDDSDAEASRAMEKPKGRAGRKSAKKEAAKTELSSYEESRMRTIQENNDFLKQLGLHETKAHLSASAVPSSRSPGNRHYVMKSKAVETSVRKSRRLGGLEAEYESIDESDADEVDAGNVRPEDPATAASAERGFYTKCLWMGRKQTTNFVLSDRLPKRIALPLTLCSIGTTVWELGAIHTGENKDNYWSNHQCLFKHPYPVGYRASKEHFGHLYHMHILEGPSGPIFRVQQFFGFSDPIVQRLIELMPNFEKPIVRRKGRDTDNTAEGAEGAEGGD* # ORIGINAL: g47.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 13519 17690 . - . ID=g47;Name=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 13519 17690 . - . ID=g47.t1;Parent=g47;Name=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 17524 17690 . - . ID=g47.t1.exon1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 17524 17690 . - 0 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 17175 17334 . - . ID=g47.t1.exon2;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 17175 17334 . - 1 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 16710 16972 . - . ID=g47.t1.exon3;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 16710 16972 . - 0 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 15837 16451 . - . ID=g47.t1.exon4;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 15837 16451 . - 1 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 15463 15542 . - . ID=g47.t1.exon5;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 15463 15542 . - 1 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 14934 15238 . - . ID=g47.t1.exon6;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 14934 15238 . - 2 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 14564 14789 . - . ID=g47.t1.exon7;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 14564 14789 . - 0 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 14246 14410 . - . ID=g47.t1.exon8;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 14246 14410 . - 2 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 13917 13975 . - . ID=g47.t1.exon9;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 13917 13975 . - 2 ID=cds.g47.t1;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 13519 13770 . - . ID=g47.t1.exon10;Parent=g47.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 13519 13770 . - 0 ID=cds.g47.t1;Parent=g47.t1 #PROT g47.t1 g47 MARYHRLGDPVLADTSCSLNADEEEHYAIVARGLCRNYGKTRILEGLDMAVPKGKIYSLLGPSGCGKTTLLKCLMGRLSVHGGRLTVLGNTPGAPGHDVPGPDVGYMPQETALFFEFTIRETLEFFGRVYRMDPEDIDSRIKFLIEFLELPPPDRIVRQMSGGQQRRLSFAVALLHMPRLLILDEPTVGVQSILRARIWQHLVELASGPNPTTIIVTTHYIEEARQSSVAAFMHNGRLLAEDAPDVLLARYSANTLEDVFLTLCVKETGAALDVGMPAPEVDAAPLDEAKTEHAHTHGSAAESVEDGNAHAHAHAHAAASVGTGISRPSAIAGRGMESPTTARTRQTSFSIMDGMQHRVHKHVGLKQSLSRGVSNTRTVVFKNITRMRRNYGFLAFQFLLPCLQIILFCLAIGADPKGLHVAIYNADVGFPPDAGFNTSMSVRYLALLDHNVIHQDAVTSPEEGRARVHRGDCWGLLEFGKNYSVDLFTRAIHNSADPDIIAGSSLYVTLDATDQQIAISIQQKVSQAFEALVSSVLTDLHMDPALGSLPVVINEPIYGSKNPSFTDFIAPGMIVSIGFGLSIGLTALAFVLERKDGLLDRMWGAGVRPMEVLLGHVITQSLVLVVQTTLLLFFALFVFKVPLKGSLILVALIAMLIGLAGMAYGILISAVSQDEIAAIQVALGSFYPVLLLSGVIWPTEAMPVYLKYVSYILPTTWSSDAMRSVLGRGWGIDHFEVWMGFVIPLAWLIILAAIAARCVRSTD* # ORIGINAL: g43.t1 original gene structure, not modified by PASA NODE_368_length_25752_cov_40.7379 AUGUSTUS gene 285 3531 . + . ID=g43;Name=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS mRNA 285 3531 . + . ID=g43.t1;Parent=g43;Name=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 285 336 . + . ID=g43.t1.exon1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 285 336 . + 0 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 505 641 . + . ID=g43.t1.exon2;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 505 641 . + 2 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 765 854 . + . ID=g43.t1.exon3;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 765 854 . + 0 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 1015 1094 . + . ID=g43.t1.exon4;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 1015 1094 . + 0 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 1363 1502 . + . ID=g43.t1.exon5;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 1363 1502 . + 1 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 1712 1875 . + . ID=g43.t1.exon6;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 1712 1875 . + 2 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 2164 2252 . + . ID=g43.t1.exon7;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 2164 2252 . + 0 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 2363 2478 . + . ID=g43.t1.exon8;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 2363 2478 . + 1 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 2807 2921 . + . ID=g43.t1.exon9;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 2807 2921 . + 2 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 3056 3141 . + . ID=g43.t1.exon10;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 3056 3141 . + 1 ID=cds.g43.t1;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS exon 3272 3531 . + . ID=g43.t1.exon11;Parent=g43.t1 NODE_368_length_25752_cov_40.7379 AUGUSTUS CDS 3272 3531 . + 2 ID=cds.g43.t1;Parent=g43.t1 #PROT g43.t1 g43 MFSEFHRRIGSARTKPIGIHKQQLGLLTRRLRQHILDEDFTRASDVLAVVATSVGTVPEIVWKAGLEVLQRTPHNHVQCVRFFRRMLPFARDRRTEVILELGLYLARRGDLRDAYDNLVGYLHTDPYSSEPLFHAYCGMLAAALWQDSLPKERPRRRSRSDSFSDNGSSGTEDDHGHARHARVRARKPSSVPPMLSSAITHFEKAFSLGTDDDAFHARYAELLEHVDRLDDARSHLSLFCESQPHNIVALRYFYVFLRRNGLGDRDSYVRILRDIAELDPTSDVLADAPLFDPELHLEILFRRLDLSSFASDVLLWRTATEVVSASKGSSVSHMWRARAAWWPRVYFDVQRVRGLAADNNSDGVSALLRARASFCRSLAKRIGSPEVNDIDKDATQTEIAPAEHASPDSGAGASSQKTLLAFADAADNATEEEEDAGDGNDG* # ORIGINAL: g816.t1 original gene structure, not modified by PASA NODE_1751_length_9394_cov_22.3934 AUGUSTUS gene 5897 8607 . + . ID=g816;Name=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS mRNA 5897 8607 . + . ID=g816.t1;Parent=g816;Name=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 5897 6094 . + . ID=g816.t1.exon1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 5897 6094 . + 0 ID=cds.g816.t1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 6227 7041 . + . ID=g816.t1.exon2;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 6227 7041 . + 0 ID=cds.g816.t1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 7212 7454 . + . ID=g816.t1.exon3;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 7212 7454 . + 1 ID=cds.g816.t1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 7633 7859 . + . ID=g816.t1.exon4;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 7633 7859 . + 1 ID=cds.g816.t1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 8049 8101 . + . ID=g816.t1.exon5;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 8049 8101 . + 2 ID=cds.g816.t1;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 8236 8607 . + . ID=g816.t1.exon6;Parent=g816.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 8236 8607 . + 0 ID=cds.g816.t1;Parent=g816.t1 #PROT g816.t1 g816 MGYCNCTKFWDGRNCDEPRRLLRPSGSGVVQSTTTGIRVRLYTEAQDAGWHYKIERVGCPIVPPVWQNNTDFLEDSNSLEPGQKYVYSITPFNPVAISITPEPFLLQSEPVQRTHPPNPPKITSIFTSIEGNAPAITITWTDDNVGLPIDKTLIIRSDGMARNVTADTNGTFVDSDDVVPGVSYSYTLASWNAIGKSNTSLPSKEVAVRVSTSVVGASSSSQTSAGAIAGAVVATIVGASASLGFMFWYRRRANRLKMEALIRSELELIDTVVQRPEIADLEIPIQCIRMRKNIGEGEFGEVYRAEVEVKGGQPTIAAVKTFKVTSLASADAVRSARSAFLGEIDLLRTVPKHRHVIELLGVCTQGDPNCMVMEYAEHGDARHYVQQYGKELSAVDLLCFCIDIARGMEHLANSQIIHRDLAARNCMVVAGPRPPNPQEKAWTLGSKAQVLVKIADFGLSRDSGDYYHAKTDRKLPIKWLSIESLEKRIFTHASDVWSYGVTAWEIFSKGIKPYPGIENRDIAAYLAQGRRMSAPEGCPVAVHAAMEACWRKHPETRPNFAQVVITMRRAMQALCSGVGGMMDLNIAGDNAMLDASGQEVSAVSVDGAQSNTLYVETTPNPMYEESRRPAVKSIM* # ORIGINAL: g815.t1 original gene structure, not modified by PASA NODE_1751_length_9394_cov_22.3934 AUGUSTUS gene 4680 5453 . + . ID=g815;Name=g815.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS mRNA 4680 5453 . + . ID=g815.t1;Parent=g815;Name=g815.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 4680 4706 . + . ID=g815.t1.exon1;Parent=g815.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 4680 4706 . + 0 ID=cds.g815.t1;Parent=g815.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 5154 5453 . + . ID=g815.t1.exon2;Parent=g815.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 5154 5453 . + 0 ID=cds.g815.t1;Parent=g815.t1 #PROT g815.t1 g815 MAGGVTDIPPQLSDPDVHLRAIVAMAQQCATVSQERANAPMGGWDAIALSHALQDSRGATAALLARAEILAPIAHQSALAITGPSAISLWAAIVPLDGRVRPATKLAL* # ORIGINAL: g814.t1 original gene structure, not modified by PASA NODE_1751_length_9394_cov_22.3934 AUGUSTUS gene 1351 2458 . + . ID=g814;Name=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS mRNA 1351 2458 . + . ID=g814.t1;Parent=g814;Name=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 1351 1554 . + . ID=g814.t1.exon1;Parent=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 1351 1554 . + 0 ID=cds.g814.t1;Parent=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 2145 2292 . + . ID=g814.t1.exon2;Parent=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 2145 2292 . + 0 ID=cds.g814.t1;Parent=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS exon 2445 2458 . + . ID=g814.t1.exon3;Parent=g814.t1 NODE_1751_length_9394_cov_22.3934 AUGUSTUS CDS 2445 2458 . + 2 ID=cds.g814.t1;Parent=g814.t1 #PROT g814.t1 g814 MAKRMCYDAGPEEKKTCKQHWRATVIYQRPRRMRTWDGAGSRLAMSMSAMLKMFVFFSVIGHQLGCVKAADLVVKISVISLTNPSQVTAAGRYCDQFFFAGSNCDPFVELCFGYTATAGMS* # ORIGINAL: g11315.t1 original gene structure, not modified by PASA NODE_1684_length_9763_cov_39.6224 AUGUSTUS gene 7236 7663 . - . ID=g11315;Name=g11315.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS mRNA 7236 7663 . - . ID=g11315.t1;Parent=g11315;Name=g11315.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 7620 7663 . - . ID=g11315.t1.exon1;Parent=g11315.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 7620 7663 . - 0 ID=cds.g11315.t1;Parent=g11315.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 7236 7437 . - . ID=g11315.t1.exon2;Parent=g11315.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 7236 7437 . - 1 ID=cds.g11315.t1;Parent=g11315.t1 #PROT g11315.t1 g11315 MWPFLLSLFRTALPRAATYIVLPAAALIGAIGYGIETTLRPPTQEPPTKAVWEQREERLLREFAEKQQQLQQQQQQQQQQQ* # ORIGINAL: g11314.t1 original gene structure, not modified by PASA NODE_1684_length_9763_cov_39.6224 AUGUSTUS gene 4312 7199 . - . ID=g11314;Name=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS mRNA 4312 7199 . - . ID=g11314.t1;Parent=g11314;Name=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 7176 7199 . - . ID=g11314.t1.exon1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 7176 7199 . - 0 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 6806 6960 . - . ID=g11314.t1.exon2;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 6806 6960 . - 0 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 6549 6595 . - . ID=g11314.t1.exon3;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 6549 6595 . - 1 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 6109 6225 . - . ID=g11314.t1.exon4;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 6109 6225 . - 2 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 5521 5581 . - . ID=g11314.t1.exon5;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 5521 5581 . - 2 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 5254 5332 . - . ID=g11314.t1.exon6;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 5254 5332 . - 1 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 4812 4914 . - . ID=g11314.t1.exon7;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 4812 4914 . - 0 ID=cds.g11314.t1;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 4312 4508 . - . ID=g11314.t1.exon8;Parent=g11314.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 4312 4508 . - 2 ID=cds.g11314.t1;Parent=g11314.t1 #PROT g11314.t1 g11314 MGKAEQERILQEPYTYLSKVPGKEVRSLLIKAFDLWLRIPKDKLAVITDVVTMLHQASLLIDDIEDNSKLRRGLPVAHMVYGVPQTINCANYVYFLALEKVLSLNKSEATTIFTETGGLFRLAVKLMQIFSENRSDFNPILDALGLYFQIRDDYANLQSAEYTENKSFCEDLTEGKFSFPIIHSITTDTSTRELLNILRQRTTDNDLKKYCLECMRRTGSFEYTKNELKVLEGRALDRIRELGGNELLTTLVADLRKVYQ* # ORIGINAL: g11316.t1 original gene structure, not modified by PASA NODE_1684_length_9763_cov_39.6224 AUGUSTUS gene 8253 9499 . + . ID=g11316;Name=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS mRNA 8253 9499 . + . ID=g11316.t1;Parent=g11316;Name=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 8253 8408 . + . ID=g11316.t1.exon1;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 8253 8408 . + 0 ID=cds.g11316.t1;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 8608 8851 . + . ID=g11316.t1.exon2;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 8608 8851 . + 0 ID=cds.g11316.t1;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 9101 9195 . + . ID=g11316.t1.exon3;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 9101 9195 . + 2 ID=cds.g11316.t1;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS exon 9440 9499 . + . ID=g11316.t1.exon4;Parent=g11316.t1 NODE_1684_length_9763_cov_39.6224 AUGUSTUS CDS 9440 9499 . + 0 ID=cds.g11316.t1;Parent=g11316.t1 #PROT g11316.t1 g11316 MAAPKPRCLVVASGHTAGVSAISFVPAFTLASSAFQVQLATPNGLRIEFTNMDDSSAKWLADFQGKPQSQPMSLESLAASWTDSPTSTSGGVQPHKGSSPYAAILVVGGMGAVFDLSTNVPLAALFTVHVAEKKPICAIGMGVAALCGKASKASSWLFREYALTGAKRLNVLSSARIDYIDYIC* # PASA_UPDATE: g11313.t1, single gene model update, valid-1, status:[pasa:asmbl_2319,status:3], valid-1 NODE_1684_length_9763_cov_39.6224 . gene 2390 3811 . + . ID=g11313;Name=g11313.t1 NODE_1684_length_9763_cov_39.6224 . mRNA 2390 3811 . + . ID=g11313.t1;Parent=g11313;Name=g11313.t1 NODE_1684_length_9763_cov_39.6224 . five_prime_UTR 2390 2532 . + . ID=g11313.t1.utr5p1;Parent=g11313.t1 NODE_1684_length_9763_cov_39.6224 . exon 2390 3196 . + . ID=g11313.t1.exon1;Parent=g11313.t1 NODE_1684_length_9763_cov_39.6224 . CDS 2533 3196 . + 0 ID=cds.g11313.t1;Parent=g11313.t1 NODE_1684_length_9763_cov_39.6224 . exon 3352 3811 . + . ID=g11313.t1.exon2;Parent=g11313.t1 NODE_1684_length_9763_cov_39.6224 . CDS 3352 3749 . + 2 ID=cds.g11313.t1;Parent=g11313.t1 NODE_1684_length_9763_cov_39.6224 . three_prime_UTR 3750 3811 . + . ID=g11313.t1.utr3p1;Parent=g11313.t1 #PROT g11313.t1 g11313 MAQMWAAVVAAVTLSLFVSINAADCGLPAVSAATNSFGECVGSAGYWFTDGRRVGVVAFGADKVEMRRNEAFAQPKMDTEPRMSIEGGPGEIWCDVSAIQKHATVKFTGPLGDRKVVVGCLSNRISMHALGVFVGSITRTLTLAHTVEGGTTEYTVEPVTAFIPKGTDTFRDDLDTSTADDITAKGATAGAIVRAQRGDAFLCDIVGGKCYQLTSGGSRVRQVPDLPGGGSIWIAGFDVASGAIFASRKPGLLPSRADAGGPTLWVLNNDAWIPADPSENLNSDDNAWRRIYDRTSWGTTYLKSETASTPFDQSPALTLDANGVNWSFTARGFATRTGSDPFALRGLLTCQCK* # ORIGINAL: g12965.t1 original gene structure, not modified by PASA NODE_1780_length_9291_cov_38.178 AUGUSTUS gene 3983 5612 . - . ID=g12965;Name=g12965.t1 NODE_1780_length_9291_cov_38.178 AUGUSTUS mRNA 3983 5612 . - . ID=g12965.t1;Parent=g12965;Name=g12965.t1 NODE_1780_length_9291_cov_38.178 AUGUSTUS exon 5571 5612 . - . ID=g12965.t1.exon1;Parent=g12965.t1 NODE_1780_length_9291_cov_38.178 AUGUSTUS CDS 5571 5612 . - 0 ID=cds.g12965.t1;Parent=g12965.t1 NODE_1780_length_9291_cov_38.178 AUGUSTUS exon 3983 5179 . - . ID=g12965.t1.exon2;Parent=g12965.t1 NODE_1780_length_9291_cov_38.178 AUGUSTUS CDS 3983 5179 . - 0 ID=cds.g12965.t1;Parent=g12965.t1 #PROT g12965.t1 g12965 MRCRVEELRRLKAQQAGSRIPNVSPPPYGESTGRAPPKYPGSSDAPVRQNAAIPSVPPPQYAEALSQRKQSMRVPAILRARHGDVTDSDREEGESELDEDGPTRVPLRVHHHHQQQRTQSRPDAHLRRSPQPTARGRRAGVPSATDLLPPPPLYGDRQPMPLGMGVARAITIDDDDGEGSGSDYQGEAGDGAEDDESGTPPPPRDQRHARPPTLPMYSVSAPPPHYDPRMHSGGHDSPWDDVSFLNPHMQRRHVMHPQSLGRPGAAPPPPYHGDSHQQPPWYSVHGADRRHRIAHHPYRQTPTRTHTTTHAPQSASLYDPIQQRPGAGGAHNSAHGAGRVMGLPPPPAYGSARLPPPPSLPAYGSSAPRLPAYGHGDYNMPPMAPPPYARWHHGEQDAPHDSGTDDTGSGDG* # PASA_UPDATE: g12966.t1, single gene model update, valid-1, status:[pasa:asmbl_2604,status:12], valid-1 NODE_1780_length_9291_cov_38.178 . gene 7428 9029 . - . ID=g12966;Name=g12966.t1 NODE_1780_length_9291_cov_38.178 . mRNA 7428 9029 . - . ID=g12966.t1;Parent=g12966;Name=g12966.t1 NODE_1780_length_9291_cov_38.178 . exon 8898 9029 . - . ID=g12966.t1.exon1;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . CDS 8898 9029 . - 0 ID=cds.g12966.t1;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . exon 8579 8631 . - . ID=g12966.t1.exon2;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . CDS 8579 8631 . - 0 ID=cds.g12966.t1;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . exon 8338 8416 . - . ID=g12966.t1.exon3;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . CDS 8338 8416 . - 1 ID=cds.g12966.t1;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . exon 7428 8152 . - . ID=g12966.t1.exon4;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . CDS 7949 8152 . - 0 ID=cds.g12966.t1;Parent=g12966.t1 NODE_1780_length_9291_cov_38.178 . three_prime_UTR 7428 7948 . - . ID=g12966.t1.utr3p1;Parent=g12966.t1 #PROT g12966.t1 g12966 MSEPAPRPAGATTTATATAPNSAPKQAASTQPPANIDTLIASIDNTLRTICTGVSEGVWINSAYAGPPTMTDHLEETLAHCQALYEAASLARTAAAMRSSADDRLSRIASGATTASEREEMYALYAAQCERRVDGARALHCELSGFVGSLRANGR* # PASA_UPDATE: g12964.t1, single gene model update, valid-1, status:[pasa:asmbl_2603,status:12], valid-1 NODE_1780_length_9291_cov_38.178 . gene 746 3232 . + . ID=g12964;Name=g12964.t1 NODE_1780_length_9291_cov_38.178 . mRNA 746 3232 . + . ID=g12964.t1;Parent=g12964;Name=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 746 937 . + . ID=g12964.t1.exon1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 746 937 . + 0 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 1159 1316 . + . ID=g12964.t1.exon2;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 1159 1316 . + 0 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 1532 1660 . + . ID=g12964.t1.exon3;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 1532 1660 . + 1 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 1817 1912 . + . ID=g12964.t1.exon4;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 1817 1912 . + 1 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 2223 2410 . + . ID=g12964.t1.exon5;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 2223 2410 . + 1 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . exon 2659 3232 . + . ID=g12964.t1.exon6;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . CDS 2659 2957 . + 2 ID=cds.g12964.t1;Parent=g12964.t1 NODE_1780_length_9291_cov_38.178 . three_prime_UTR 2958 3232 . + . ID=g12964.t1.utr3p1;Parent=g12964.t1 #PROT g12964.t1 g12964 MIGAGESGKSTVVKQLKLISQIKFQPDELKAIASNLRINTLTSMQVLIDACKKLDIKFEDAADQDRAALITAFEFKNDDGIMPGEIAEAITLLWKSKPILEAWERRSEFWCLDSVDFYFENIQRFVEEDYLPDEQDLVMVRMITNGIVTTAIENPPVNFTVVDVGGQRNERRKWMHVFSDVTAVIYVANLAGFNTIVYEDGTTNRLHECLSVFESTLNTDMFANTPIYLLLNKKDLFETMIRKHDLKKCFEDYPGGQDVHGAIEFVESKFRSKLKGDGSRMKTHAVATRMKKDVKAVWEEIQADLKAKNKAQIDKATKLLKKAEKRRSKAKKTSTPAAAPAETPAVPEPVEVK* # ORIGINAL: g6755.t1 original gene structure, not modified by PASA NODE_770_length_17926_cov_38.72 AUGUSTUS gene 307 1679 . + . ID=g6755;Name=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS mRNA 307 1679 . + . ID=g6755.t1;Parent=g6755;Name=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 307 430 . + . ID=g6755.t1.exon1;Parent=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 307 430 . + 0 ID=cds.g6755.t1;Parent=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 703 842 . + . ID=g6755.t1.exon2;Parent=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 703 842 . + 2 ID=cds.g6755.t1;Parent=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 1155 1679 . + . ID=g6755.t1.exon3;Parent=g6755.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 1155 1679 . + 0 ID=cds.g6755.t1;Parent=g6755.t1 #PROT g6755.t1 g6755 MVGDAHQERFEKLQTIISPADNRAGYRGLLSTCNPPCLPYIGVYLSDLVFIDEGNPSTISDPGCPDPLVNFTKYRRMANLIEEIRRYQPVRYKTVADPIVVQFFESHPVLDEEATYQRSLALEPRERSDRLSLGSEDSPNQKSVRRAKAKSLSIVRDIAKQLPQLIINASPKTLRKSQVNFATSAAASTSTPLSPMSNGQFTFTGGDASPSSSPSPIASTPTLQSRPSIVLPDAAEESEDPALSGTRKRASSALGRITTAWV* # PASA_UPDATE: g6760.t1, single gene model update, valid-1, status:[pasa:asmbl_9296,status:12], valid-1 NODE_770_length_17926_cov_38.72 . gene 13709 17856 . - . ID=g6760;Name=g6760.t1 NODE_770_length_17926_cov_38.72 . mRNA 13709 17856 . - . ID=g6760.t1;Parent=g6760;Name=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 17628 17856 . - . ID=g6760.t1.exon1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 17628 17856 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 17169 17327 . - . ID=g6760.t1.exon2;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 17169 17327 . - 2 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 16743 16810 . - . ID=g6760.t1.exon3;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 16743 16810 . - 2 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 16466 16607 . - . ID=g6760.t1.exon4;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 16466 16607 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 16293 16366 . - . ID=g6760.t1.exon5;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 16293 16366 . - 2 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 15909 16034 . - . ID=g6760.t1.exon6;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 15909 16034 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 15509 15646 . - . ID=g6760.t1.exon7;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 15509 15646 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 15231 15302 . - . ID=g6760.t1.exon8;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 15231 15302 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 14958 15116 . - . ID=g6760.t1.exon9;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 14958 15116 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 14324 14731 . - . ID=g6760.t1.exon10;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 14324 14731 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . exon 13709 14106 . - . ID=g6760.t1.exon11;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . CDS 13903 14106 . - 0 ID=cds.g6760.t1;Parent=g6760.t1 NODE_770_length_17926_cov_38.72 . three_prime_UTR 13709 13902 . - . ID=g6760.t1.utr3p1;Parent=g6760.t1 #PROT g6760.t1 g6760 MPFVCPLQELEIPGRTVLREGNVSLMTTKRRYQCVLFNDLLVFASKAPGGKTFNVDLSLALATIWFEDLHDLDPQTTADDAFEVYNPDRPYTVYAGTSNQKKLWLTAIRDAIVKYVYKEVKSANNDPDTSYRNATFRHKDGGEYVGEWNDSKRQGQGKFVWPNGTSYEGAWVDDQMHGFGAMTYNTGEKYSGDWKNGRPHGEGTLNFSGDAYSGQWEEGKKHGEGTITFANGDVFEGQWVQDEISGYGRIVYHGGGSYDGQWLNSKRHGQGTHINSKGVTYTGEWLNNERDGSGEWRHPDGSWYSGYFTKNMRHERGSSYSPQEGTYDGDWKMGHKKTLIFMLIRVSSYSPNALLPNNTLVHSAASQEGQGGMTFSNGDRYSGDWLRDMPHGHGTMTFSNGDVYDGELFQGQIHGRGTMQYAVGGNYSGSWTNGMRDGQGVLVLADGSIYEGYFRANLRDGEGKAQYADGTTYDGRWCEDKYHGRGTLSRHGTRYIGDWIMGRKEGNGTFADSHGQYVGAWKDDMRHGTGVFSNLVGGRYEGKWNMDVRVGKGTLTYNDGSSVVLVWKDGRLAAPGCEVIPPDLPSLPARDE* # ORIGINAL: g6757.t1 original gene structure, not modified by PASA NODE_770_length_17926_cov_38.72 AUGUSTUS gene 7251 9391 . + . ID=g6757;Name=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS mRNA 7251 9391 . + . ID=g6757.t1;Parent=g6757;Name=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 7251 7367 . + . ID=g6757.t1.exon1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 7251 7367 . + 0 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 7535 7694 . + . ID=g6757.t1.exon2;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 7535 7694 . + 0 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 7875 7984 . + . ID=g6757.t1.exon3;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 7875 7984 . + 2 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 8096 8210 . + . ID=g6757.t1.exon4;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 8096 8210 . + 0 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 8332 8461 . + . ID=g6757.t1.exon5;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 8332 8461 . + 2 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 8686 8908 . + . ID=g6757.t1.exon6;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 8686 8908 . + 1 ID=cds.g6757.t1;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS exon 9362 9391 . + . ID=g6757.t1.exon7;Parent=g6757.t1 NODE_770_length_17926_cov_38.72 AUGUSTUS CDS 9362 9391 . + 0 ID=cds.g6757.t1;Parent=g6757.t1 #PROT g6757.t1 g6757 MVALLSFFSIVHSICLNLSQRLNSSADVGSFLIELKDLLSSAVSTNALPHLPPAAHYETIVRELESIGWDSIQDVDEGMRTVSIAVRCICCACDYPRSPPGVRTCLPAPFEPRFNASGGLAGIVAQFRKVLARYQDLWQMLDELDQNVWVLFPEKPSPDIAVRRIALGPSCSLQVDIDAGNPRRFPTCKFLGSDRAARPLRESLNRNMQLWDTTKTIYANLCLCLGDNVAFPLRPSATHGAGGAADLAVVECAICYSYRLDDAVPDKGCDAPNCGRQFHTACLQEPIRVKMSVS* # PASA_UPDATE: g6759.t1, single gene model update, valid-1, status:[pasa:asmbl_9298,status:3], valid-1 NODE_770_length_17926_cov_38.72 . gene 12194 13552 . + . ID=g6759;Name=g6759.t1 NODE_770_length_17926_cov_38.72 . mRNA 12194 13552 . + . ID=g6759.t1;Parent=g6759;Name=g6759.t1 NODE_770_length_17926_cov_38.72 . five_prime_UTR 12194 12405 . + . ID=g6759.t1.utr5p1;Parent=g6759.t1 NODE_770_length_17926_cov_38.72 . exon 12194 13552 . + . ID=g6759.t1.exon1;Parent=g6759.t1 NODE_770_length_17926_cov_38.72 . CDS 12406 13437 . + 0 ID=cds.g6759.t1;Parent=g6759.t1 NODE_770_length_17926_cov_38.72 . three_prime_UTR 13438 13552 . + . ID=g6759.t1.utr3p1;Parent=g6759.t1 #PROT g6759.t1 g6759 MVFGNNKVHPAADVPAAAEDPTQTRLNLLSTLTRVTNLSCGDTGGSLYFEHDVVPGAPGPSRVVERPSCPFEAKYALHFVPGSVVLALEAIPTHEELLASGRIVKIPGAKEFSFGKGFHDGYGACYEMISTQLLQLEDGTFLSMSHKRVFFSHRWVQHPDGTATPDDKEGRKLAKMKALVQPGDLVWFDYMCIPQLTRDTQLAAVASLPYYIGHSDVVHILATDDENYAQYKTRAFTNIELVCASLPVTYGGYETADGAMSGGNAHVKVKPLCAIYDTNGAAYPFLNPVKADMYDKNDLRYIENLIDFVRAKCRDALASMEEKGMERPKDKDDVTRLLAFLDA* # PASA_UPDATE: g6756.t1, single gene model update, valid-1, status:[pasa:asmbl_9294,status:3], valid-1 NODE_770_length_17926_cov_38.72 . gene 2590 5261 . - . ID=g6756;Name=g6756.t1 NODE_770_length_17926_cov_38.72 . mRNA 2590 5261 . - . ID=g6756.t1;Parent=g6756;Name=g6756.t1 NODE_770_length_17926_cov_38.72 . five_prime_UTR 5070 5261 . - . ID=g6756.t1.utr5p1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . exon 4914 5261 . - . ID=g6756.t1.exon1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . CDS 4914 5069 . - 0 ID=cds.g6756.t1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . exon 4691 4805 . - . ID=g6756.t1.exon2;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . CDS 4691 4805 . - 0 ID=cds.g6756.t1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . exon 4246 4343 . - . ID=g6756.t1.exon3;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . CDS 4246 4343 . - 2 ID=cds.g6756.t1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . exon 3988 4057 . - . ID=g6756.t1.exon4;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . CDS 3988 4057 . - 0 ID=cds.g6756.t1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . exon 2590 3496 . - . ID=g6756.t1.exon5;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . CDS 2760 3496 . - 2 ID=cds.g6756.t1;Parent=g6756.t1 NODE_770_length_17926_cov_38.72 . three_prime_UTR 2590 2759 . - . ID=g6756.t1.utr3p1;Parent=g6756.t1 #PROT g6756.t1 g6756 MASPQPPQGYKPSPLDTEMSEQELLAMYDKYARGEIPRYKDHLSDDADKFFEDMEKVPLFMTKSPDSINSEDAPALAALQSIIYEDSTPENRANYHKEVGNEEFKKGKAHYKMALKCYDDGLKENCGVASVEAALYSNRAMVQLNLGNYRSCVDDCKEARKRDPSAIKVYYRAAKALSAVERYAEAVQWCDDGLAVDAANTSIQELRSSALKLKAAKEKKERAADAQRRKEKQATDALDSAIRARGIRLGNATANPAADVRGVVHNPTGTSVYIDADSVLHWPVCFLYPESGQSDFVADFNENTMISAQVDAVLAERPPWDEAGAYVSSTCDVFFEHFAEGSHDSVLVPVNRSATLREVLSDRRCVVSAHLPTFMIVPRASPFREKLVIAK* # PASA_UPDATE: g6758.t1, single gene model update, valid-1, status:[pasa:asmbl_9295,status:3], valid-1 NODE_770_length_17926_cov_38.72 . gene 9185 10826 . - . ID=g6758;Name=g6758.t1 NODE_770_length_17926_cov_38.72 . mRNA 9185 10826 . - . ID=g6758.t1;Parent=g6758;Name=g6758.t1 NODE_770_length_17926_cov_38.72 . five_prime_UTR 10751 10826 . - . ID=g6758.t1.utr5p1;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . exon 10528 10826 . - . ID=g6758.t1.exon1;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . CDS 10528 10750 . - 0 ID=cds.g6758.t1;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . exon 10019 10272 . - . ID=g6758.t1.exon2;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . CDS 10019 10272 . - 2 ID=cds.g6758.t1;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . exon 9185 9852 . - . ID=g6758.t1.exon3;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . CDS 9715 9852 . - 0 ID=cds.g6758.t1;Parent=g6758.t1 NODE_770_length_17926_cov_38.72 . three_prime_UTR 9185 9714 . - . ID=g6758.t1.utr3p1;Parent=g6758.t1 #PROT g6758.t1 g6758 MEVAAVQSGFKALDRRLRALEAALALDAGDADRVLSEAQTDGALTTCRAHLDQMEHTVALLVKENDGIAAVVARTADLDRLPSETSDPGALDDASKAEIVLASEHGVRTTGKLLEEIDALKGAINPPESEAVDQIVVALTEVEANVHSQQMKAQSVQRQVDALLSSFGGAMHAVSQQFVAWDTMLSTLEQRVESIAAAARERRS* # PASA_UPDATE: g6685.t1, single gene model update, valid-1, status:[pasa:asmbl_9907,status:3], valid-1 NODE_8_length_78047_cov_40.4926 . gene 59439 62540 . - . ID=g6685;Name=g6685.t1 NODE_8_length_78047_cov_40.4926 . mRNA 59439 62540 . - . ID=g6685.t1;Parent=g6685;Name=g6685.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 62258 62540 . - . ID=g6685.t1.utr5p1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 62149 62540 . - . ID=g6685.t1.exon1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 62149 62257 . - 0 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 61963 62019 . - . ID=g6685.t1.exon2;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 61963 62019 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 61674 61847 . - . ID=g6685.t1.exon3;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 61674 61847 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 61504 61557 . - . ID=g6685.t1.exon4;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 61504 61557 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 61292 61399 . - . ID=g6685.t1.exon5;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 61292 61399 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 60958 61113 . - . ID=g6685.t1.exon6;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 60958 61113 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 60652 60755 . - . ID=g6685.t1.exon7;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 60652 60755 . - 2 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 60315 60431 . - . ID=g6685.t1.exon8;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 60315 60431 . - 0 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . exon 59439 59589 . - . ID=g6685.t1.exon9;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . CDS 59533 59589 . - 0 ID=cds.g6685.t1;Parent=g6685.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 59439 59532 . - . ID=g6685.t1.utr3p1;Parent=g6685.t1 #PROT g6685.t1 g6685 MGNSASNGLGSSTTAEEAVRGADLHGKVILITGANTGIGRETARVLAKQGATLYVTCRDEAKGKVTVDYLKQETGNDDVHYLQLELSSLKSVRACAANFLALNKPLHVLINNAGIMATPYHKTEDGFESQIGTNHFGHFLLTNLLLPKLKESAPARIVNVSSMAHMFGGVLFDDIHFEKTNGYTSTYASWASYAQSKTANILFTVGLRKRLEGTGVTAFSLHPGGIKTDLQRNLGWFTQGIMAVSSVFMKSIPQGAATTVYLATAPEVADGKGSPYFADCNEAVAKPYAVDPTDADRLWEITAKAVGLGIN* # ORIGINAL: g6681.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 49851 51264 . - . ID=g6681;Name=g6681.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 49851 51264 . - . ID=g6681.t1;Parent=g6681;Name=g6681.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 50326 51264 . - . ID=g6681.t1.exon1;Parent=g6681.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 50326 51264 . - 0 ID=cds.g6681.t1;Parent=g6681.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 49851 50183 . - . ID=g6681.t1.exon2;Parent=g6681.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 49851 50183 . - 0 ID=cds.g6681.t1;Parent=g6681.t1 #PROT g6681.t1 g6681 MDAATKPAMDNAPVLSIADSPQFRALFTPQLVRLAGIFTGNAWQIRVVGGAVRDILLGKHPKDIDLSTDATPDEVMALLTAAGVRHIPTGLQHGTVTAVIDGENFEVTTLRIDRETDGRHAVVDFTRDWREDANRRDLTINAMSVSFDGMLYDYFGGVNDLAARRVVFVGDPTSRIREDYLRILRYFRFHARINETGTHDEATIRAIADNVSGLSGISGERIWAEMSKILSGPRAPQIMSLMRDIGLLGQIGFPPDFSIDDISRVHGCSSNPVTVLVSGVDRPDDFESICLRWRLSNAEKSLGVFIMRWRGPQVNLKLCKDLVVDATPILFAEELLKYHCRMDEAAALCAWTIPDAPVNGSVLAHAGYAKGPELGKALRDLREAWKQSDFTLTREQLLSILPPPPPAPAPTAKKGKGAVHRKV* # ORIGINAL: g6683.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 54567 55683 . - . ID=g6683;Name=g6683.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 54567 55683 . - . ID=g6683.t1;Parent=g6683;Name=g6683.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 55681 55683 . - . ID=g6683.t1.exon1;Parent=g6683.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 55681 55683 . - 0 ID=cds.g6683.t1;Parent=g6683.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 54567 55580 . - . ID=g6683.t1.exon2;Parent=g6683.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 54567 55580 . - 0 ID=cds.g6683.t1;Parent=g6683.t1 #PROT g6683.t1 g6683 MADFIPESSSAARVRASVKRALSPESTTEHTSPKKPTHSTSRAPRSPTLSDLRSIYTFDDAVEATSTDFIDRGGQGAVFKATVKHHNNPLLPLHVAVKKVSKVAVRTMVDVQGDGTRVIPSEAHYHRQASRAVTGVPRYYGCFEDHEHYYMTMELLTKEAGWMDLWRLRTPPSEAFAREMFSKVAYIVCQLAGTAGVFHFDVTTSNVMFNKHTREVKIIDFGLATSFSAGAKWRPSVDGMRGTPSWTAPEQRCSADYDLELAQTFSLGMLLHALTYGWRPCKKDGSFCPETVCQASKFKSVPQVVVSAEFSALITNMLSVDPKARPRMQELWRLAFLV* # ORIGINAL: g6687.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 70183 77941 . + . ID=g6687;Name=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 70183 77941 . + . ID=g6687.t1;Parent=g6687;Name=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 70183 70193 . + . ID=g6687.t1.exon1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 70183 70193 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 70573 70768 . + . ID=g6687.t1.exon2;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 70573 70768 . + 1 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 70907 70983 . + . ID=g6687.t1.exon3;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 70907 70983 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 71156 71193 . + . ID=g6687.t1.exon4;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 71156 71193 . + 1 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 71432 71529 . + . ID=g6687.t1.exon5;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 71432 71529 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 71661 71757 . + . ID=g6687.t1.exon6;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 71661 71757 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 71958 72040 . + . ID=g6687.t1.exon7;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 71958 72040 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 72300 72401 . + . ID=g6687.t1.exon8;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 72300 72401 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 72559 72692 . + . ID=g6687.t1.exon9;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 72559 72692 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 73025 73127 . + . ID=g6687.t1.exon10;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 73025 73127 . + 1 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 73286 73408 . + . ID=g6687.t1.exon11;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 73286 73408 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 73624 73711 . + . ID=g6687.t1.exon12;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 73624 73711 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 73892 73942 . + . ID=g6687.t1.exon13;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 73892 73942 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 74115 74251 . + . ID=g6687.t1.exon14;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 74115 74251 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 74423 74524 . + . ID=g6687.t1.exon15;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 74423 74524 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 74721 74814 . + . ID=g6687.t1.exon16;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 74721 74814 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 75052 75183 . + . ID=g6687.t1.exon17;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 75052 75183 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 75450 75559 . + . ID=g6687.t1.exon18;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 75450 75559 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 75747 75848 . + . ID=g6687.t1.exon19;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 75747 75848 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 76193 76276 . + . ID=g6687.t1.exon20;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 76193 76276 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 76671 76712 . + . ID=g6687.t1.exon21;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 76671 76712 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 76840 76944 . + . ID=g6687.t1.exon22;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 76840 76944 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 77201 77297 . + . ID=g6687.t1.exon23;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 77201 77297 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 77485 77615 . + . ID=g6687.t1.exon24;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 77485 77615 . + 2 ID=cds.g6687.t1;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 77834 77941 . + . ID=g6687.t1.exon25;Parent=g6687.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 77834 77941 . + 0 ID=cds.g6687.t1;Parent=g6687.t1 #PROT g6687.t1 g6687 MAGNGASDDNIKVFVRVRPGDVGVNQADSEGEQRKCVSVDIGNRAVILTGATEPKVFTYDHVATETATQEEVFAAVGKVISEGCIMGYNGTIFAYGQTGSGKTFTMLGPQDDHNIPRELRGVIPRTFEHVFSLISREVQMKGNKKEYLCKCSFLEIYNEQIFDLLDPTSNCLHLREDIKRGVFVEGQMERNVTSAAEAYEVLMAGSRNRRVASTSMNRESSRSHAVFTMEIQSKEMHVGDVANILCARLNLIDLAGSERQSDTNALGMRLKEAGSINKSLSALGNVINALTDVAHGKSRHVHYRDSKLTFLLRDSLGGNAKTFIIANISPLARCYGETLSTLKFARGAKLIKNKAVINEALHGNVVQLQDEVRKLKDELQQTTFMLNTLKANPRAHVDNGGSVGGLHIAVEAMVEERDKMVSECERLTERSSSLEEMVRRQENAVQSTKMIVKFRESYIAKLEKSAKGGVTPSDVATEKFCMLAKEIDELKAQYDHHPDVTRFAEENAALRFEVKRLRAQIPLNSNDNENAEMRSLRDKVVALSAALAEAAKAADAAKSFVPPSPRRPKDGEWRGQTEADAHVKKMQTELRETKMHMQTELQTLREREETLEGDLLAANAVIAELESSLKAYKMKSNFERETIFDEVMLSDVTMEGPGDVLRELTAVREENASLRTKVDEFEVIHRTLKQQIAKAENSRRVSDIFSMRDPGEYNALQKKIDHLASELSMAARRNEELLDDVRTANDRAEDAIAALNGERASVSANITRTQAALEAAEQSLGALGTEREKAQLEVERLTDAYEQIKVPLALHLLL* # ORIGINAL: g6675.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 32738 35262 . + . ID=g6675;Name=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 32738 35262 . + . ID=g6675.t1;Parent=g6675;Name=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 32738 33955 . + . ID=g6675.t1.exon1;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 32738 33955 . + 0 ID=cds.g6675.t1;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 34213 34346 . + . ID=g6675.t1.exon2;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 34213 34346 . + 0 ID=cds.g6675.t1;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 34437 34662 . + . ID=g6675.t1.exon3;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 34437 34662 . + 1 ID=cds.g6675.t1;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 34869 34992 . + . ID=g6675.t1.exon4;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 34869 34992 . + 0 ID=cds.g6675.t1;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 35153 35262 . + . ID=g6675.t1.exon5;Parent=g6675.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 35153 35262 . + 2 ID=cds.g6675.t1;Parent=g6675.t1 #PROT g6675.t1 g6675 MLPRKKQAFFGSPDSRKDEEKAERRSQSDLSSPLNFSSLGSDSHSDVVSACSTLIDWLHTRPICRDYGRPSKNLTKWTPTLLSTQDDAASPKRAKPNQQSKAMNGAPDAPQVKLVLRVAGQSSDGPPKTAMPRKHPRSESESDSSDDSDDSDDSDDSDRRRKDLSPPAKRPAVRSRSSPESALSRNGSGADAGRLSRLASGEDRVTENAGDDVRKDRSAAAAHERRDKVYDKEKKERDSDRERTLKGRRESRDDNEGRTSGKERDKGKERDRNRDREKEREKERDRERDKERDRRERDKEREKDEKKEREKEREREREKDREREREREKEREREREKEREREREKEREREREKERHRERDKDRERDKDRDRSDTNGRRDSRRPSTTEETYDALYKKAKAQKHEADKREASKRSGNEYIVQAVELYKGTIRMMETVINNFLGTSDKPRATLCLKCKAILERRLHLLDDGLLRRGAKVRESLNAAVTAAASHARPHGALGLPPPSRADTGAAPPSNGSGLQSPQLDHQSHLSVTLPSATVDAILKYVDETLLTLRARETWKQSETYVDQATFAQSTQACGPISLDSSPSSAVAYVEDALKRMHQR* # ORIGINAL: g6670.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 21542 23848 . - . ID=g6670;Name=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 21542 23848 . - . ID=g6670.t1;Parent=g6670;Name=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 23668 23848 . - . ID=g6670.t1.exon1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 23668 23848 . - 0 ID=cds.g6670.t1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 23481 23537 . - . ID=g6670.t1.exon2;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 23481 23537 . - 2 ID=cds.g6670.t1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 23186 23311 . - . ID=g6670.t1.exon3;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 23186 23311 . - 2 ID=cds.g6670.t1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 22797 22961 . - . ID=g6670.t1.exon4;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 22797 22961 . - 2 ID=cds.g6670.t1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 22356 22495 . - . ID=g6670.t1.exon5;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 22356 22495 . - 2 ID=cds.g6670.t1;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 21542 21880 . - . ID=g6670.t1.exon6;Parent=g6670.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 21542 21880 . - 0 ID=cds.g6670.t1;Parent=g6670.t1 #PROT g6670.t1 g6670 MAQQAAARAAAMARRLAAQPNDAVEVRVPGAPHDAGRELPVDRRLAFLESTLQRDPAVFLERWGRHLTADELNEFAASDDYEVRWHVRSIARERASGTGSAGTRAVVRNRRFHFMQDLVQKGEYFSDAAMRERNPAGFEDYIGRHMSQAEHRALSVMDPDSALSHLPLAGFLMNALDERLRREGTELMRGAGVRPEDAADDGCGSDGEDDADSEDECGPWGGEERALSRKDKARLRAEFLRLMEERFLDGRDTVSKHTDFFYTVSVSSLLALARQRSIVSAWIETDYYVVRATWMPDLPTQDIDYGPIDANEAYDDVDAMDRDAEEAYFDADDTE* # ORIGINAL: g6677.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 37230 38677 . - . ID=g6677;Name=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 37230 38677 . - . ID=g6677.t1;Parent=g6677;Name=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 38570 38677 . - . ID=g6677.t1.exon1;Parent=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 38570 38677 . - 0 ID=cds.g6677.t1;Parent=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 38110 38477 . - . ID=g6677.t1.exon2;Parent=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 38110 38477 . - 0 ID=cds.g6677.t1;Parent=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 37230 37959 . - . ID=g6677.t1.exon3;Parent=g6677.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 37230 37959 . - 1 ID=cds.g6677.t1;Parent=g6677.t1 #PROT g6677.t1 g6677 MRLARVVLGYDASKGELFKQVAHARHVPSGACLAHQVWHCVSHKVVRDVMGWRVIGDDWVGRDGMRMQHVTDFRPLENSRDAWRIVQALHEPRRLASCVVTNGFVRFHGFRAPSLLLAEVPYSGADILPAIVAACALAHANALEVKGRLFAAAASGDLRKLATIVAEGVFVDWEDSSHETALFLAAAGGHAACCRFLLHRGADPNARDWKGCTPLHIAASRGWSYVVDALEHFGAVRSFRTAYDVRPANSSARRRDRDFGFGNSSNYAQCAESVAVDEDDEDVLVDYDNFADNDCIDVSLDRFRELKALLEAGQLSIGEFEHRKCTIIDRMTGTSQITPPEVPPPQPPLSMEPWALFVDAAQPSCSSCPGVKNTGTHHGPSSASKRDSGYVSNASPALSIC* # PASA_UPDATE: g6679.t1, single gene model update, valid-1, status:[pasa:asmbl_9905,status:12],[pasa:asmbl_9906,status:12], valid-1 NODE_8_length_78047_cov_40.4926 . gene 43853 47840 . - . ID=g6679;Name=g6679.t1 NODE_8_length_78047_cov_40.4926 . mRNA 43853 47840 . - . ID=g6679.t1;Parent=g6679;Name=g6679.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 47729 47840 . - . ID=g6679.t1.utr5p1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . exon 47607 47840 . - . ID=g6679.t1.exon1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . CDS 47607 47728 . - 0 ID=cds.g6679.t1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . exon 46024 47438 . - . ID=g6679.t1.exon2;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . CDS 46024 47438 . - 1 ID=cds.g6679.t1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . exon 45766 45923 . - . ID=g6679.t1.exon3;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . CDS 45766 45923 . - 2 ID=cds.g6679.t1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . exon 45040 45639 . - . ID=g6679.t1.exon4;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . CDS 45040 45639 . - 0 ID=cds.g6679.t1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . exon 43853 44888 . - . ID=g6679.t1.exon5;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . CDS 43995 44888 . - 0 ID=cds.g6679.t1;Parent=g6679.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 43853 43994 . - . ID=g6679.t1.utr3p1;Parent=g6679.t1 #PROT g6679.t1 g6679 MPDDSIEAMQADIEAKRAARRERMRALEEQMQRDEAELKEKKERRQREREEKRAQATGVPVPATDAPPRIPSAVVEEKKAPATATSGSLDAFDDSERRREERRLRREEEDKEATRKKELERAERQKQLSSEEDAVAQRRLEREREREREREERRRKEEEEEKKEKERRAERERERAERRLKEEEDAKKEAAHRAEREKEREREKEERQRKEDEEEAKKEVARRAEREKEREREKVERRLKEEEDEKKEAARRAEREKEREERRRKEEEGEKKETARRAEREKEREKEREKEKENAKEKEKEKARERQMEGRVPKAEQDERREKESRALKREAVVHVKAPVHDATQAGTRAPAQTLPGEGSANAPVATPMKHTGRFERRESLVAAAADADYEAIEAQMEKRVLDATTYDERASARAMLRQLRADREEHLRKHPPSRQKAAPKATPTPTPMSTPASSSAGPCASNANKAFVAEKTPTKHSQSSVHHVPTVHHTHHAPAPVASAPVHSDGGELHDGMSYEERAAARARARDQRKSTDAGQPTAKAPSISTSSGAGAKAISGALSESKTVSHVKTAAAPSTQPASSTHSVADEKGKTPIITKAAGESKKADPPKATPTPTPTPTPAAAAPARTQQPAAAVESTKPAAFAPSKPLDGSLESLYAEFVNRSLASDAAGRGKLPVSKESIGAAFADGVLACKLVNTAVPGTVDVRVINTGAALSAAGGARENITLAFNSARGIGCNLAAVSVDALEKGTNDAAIKFAAAVVKSTVMARTKVEYVDEDKPVRPKSCSKCGERPAEKYGVRKDATVVCMTCLESPRALLALCGVDSAAASAGTSAPIGAPASVPVAASRTSAPTVHVTATPDVSGDSDSYEARAAARRTARESDDQKKRHSTGTTLNVTAFGGARSAPSSAPGSPAGSPKPQRPASAVFGSSPAASPMGSPASKRLSAGSSGKDALLEWCRLRTMGYEGVTMTDFSKSWADGLAFCALLHSCMPSYIEYAGLWREFAEGKADRRKLFAAAFNGFTKCGVHALLDVEDMVSMERPDAISVMTYVSSIYQYFK* # ORIGINAL: g6671.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 24146 26350 . + . ID=g6671;Name=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 24146 26350 . + . ID=g6671.t1;Parent=g6671;Name=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 24146 24269 . + . ID=g6671.t1.exon1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 24146 24269 . + 0 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 24591 24769 . + . ID=g6671.t1.exon2;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 24591 24769 . + 2 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 24865 24936 . + . ID=g6671.t1.exon3;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 24865 24936 . + 0 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 25065 25189 . + . ID=g6671.t1.exon4;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 25065 25189 . + 0 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 25366 25491 . + . ID=g6671.t1.exon5;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 25366 25491 . + 1 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 25597 25738 . + . ID=g6671.t1.exon6;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 25597 25738 . + 1 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 26022 26125 . + . ID=g6671.t1.exon7;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 26022 26125 . + 0 ID=cds.g6671.t1;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 26218 26350 . + . ID=g6671.t1.exon8;Parent=g6671.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 26218 26350 . + 1 ID=cds.g6671.t1;Parent=g6671.t1 #PROT g6671.t1 g6671 MSALRFEGSSHFRQRIALAVLSGRAVRIENIRALDDDPGLRGTAVLVRPGIVSGARNVVHDCGTARSIGYFLEGIIALLPFGKAPSRITFTGITNDDRDPSVDTLRTVTLPLLRKFGIDEGLELKITKRGAPPLGGGEVVFQCPIVRKLIPMQLLDPGKIKRIRGIAYSTRVAPQTANRIVDASRALLNAFIPDVYIYTDHYRGQESGLSPGFALSLVAESTTGTLLCAESAAVAGQLPEEVGERTAQLLFEEIKRGGCIDTQNQSLAMLLMALGPEDVSRVRLGMLSPHTVQFLRDMRDFFGTTFKIETDAQTHSLLVSCIGIGYLNVSKKVA* # PASA_UPDATE: g6673.t1, single gene model update, valid-1, status:[pasa:asmbl_9903,status:3], valid-1 NODE_8_length_78047_cov_40.4926 . gene 28114 29353 . - . ID=g6673;Name=g6673.t1 NODE_8_length_78047_cov_40.4926 . mRNA 28114 29353 . - . ID=g6673.t1;Parent=g6673;Name=g6673.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 29192 29353 . - . ID=g6673.t1.utr5p1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 29102 29353 . - . ID=g6673.t1.exon1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 29102 29191 . - 0 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 28950 28977 . - . ID=g6673.t1.exon2;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 28950 28977 . - 0 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 28780 28830 . - . ID=g6673.t1.exon3;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 28780 28830 . - 2 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 28554 28624 . - . ID=g6673.t1.exon4;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 28554 28624 . - 2 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 28297 28382 . - . ID=g6673.t1.exon5;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 28297 28382 . - 0 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . exon 28114 28178 . - . ID=g6673.t1.exon6;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . CDS 28166 28178 . - 1 ID=cds.g6673.t1;Parent=g6673.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 28114 28165 . - . ID=g6673.t1.utr3p1;Parent=g6673.t1 #PROT g6673.t1 g6673 MSAMEVDPSPAATTGTAGKGKERKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGR* # PASA_UPDATE: g6668.t1, single gene model update, valid-1, status:[pasa:asmbl_9913,status:12], valid-1 NODE_8_length_78047_cov_40.4926 . gene 1995 17203 . - . ID=g6668;Name=g6668.t1 NODE_8_length_78047_cov_40.4926 . mRNA 1995 17203 . - . ID=g6668.t1;Parent=g6668;Name=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 16957 17203 . - . ID=g6668.t1.exon1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 16957 17203 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 16491 16756 . - . ID=g6668.t1.exon2;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 16491 16756 . - 2 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 15776 15989 . - . ID=g6668.t1.exon3;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 15776 15989 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 15417 15637 . - . ID=g6668.t1.exon4;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 15417 15637 . - 2 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 15030 15314 . - . ID=g6668.t1.exon5;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 15030 15314 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 14428 14886 . - . ID=g6668.t1.exon6;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 14428 14886 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 3180 14243 . - . ID=g6668.t1.exon7;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 3180 14243 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 2705 2980 . - . ID=g6668.t1.exon8;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 2705 2980 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . exon 1995 2354 . - . ID=g6668.t1.exon9;Parent=g6668.t1 NODE_8_length_78047_cov_40.4926 . CDS 1995 2354 . - 0 ID=cds.g6668.t1;Parent=g6668.t1 #PROT g6668.t1 g6668 MATRVQVGARSTRDSEAADTDAQGDGVDHDNEDDHAKARKQAAEDELSAACDALVRWLHPRIALSLRPGEERWRKFTNSTERSLRKKCVVVSRRMEGVAVTAASVGVCLAHCDLQSPPLEHLDGLLDRVFRPALTECTTVGAAWPHVLSQDVTRHMGQLSTALHAALGLSKESVHASPPQLGSDPLSLPLAEIDFWAAREAKLRAMRDQLGSRGVVRVAEILAQCKSSYSHSFARITRDVDTAYAEATDVSLHMRTLRPYFERLTQASTSGLESIVAVFGPMFKTLQLVWQHSTCLHSPPRIIRVIQLVTGCLVAQVRDFLNWEALLTMDGDDALHMLDVALDVADCFSAEYSAAKASTLTLSPADGWRFADEAVLGDFDAFVDRMVAMREAMQTAYDFSRLEKIDVGGPKGRALTSDVHEVWGDFCRAYEAFRCLQADPFGAGAGDFDRRARWFRACVAALDERIGCVIDRGLADCDVTGHYLATLDTFAGLVGRPAVRRRIDGRYEGFVGALSREIDWVHASFVAGRNNPPIHKNMPPTAGALVWIAQLRDTLKTPWTRFLQLDDSIKALPTAVDCERKYNYLLRSMAEAEEGIRRAWAQRVDRDARDSLCKPLLRRAGADLAVNFDDALAAAMRELKYRGMLGLEMQVPTAIAPFDSETEAMRVLTTKLGIVAAQYNSVRRSVAPPEAPLVAQMVAHIDRLLCRGTDGFVSWESSAALEYVSEVQMAVEDLSTRTERLIVLVQEAADLTSRWAAPILTRRVRKDGTRYLPLDERPARRDARAKEVRAGVRRIAAIVDDIFALFSVAPQSRERIDYLAHMDALVSAAAEVSVRASVGYVLEQIADNRPEASTPLVEVQLDVVAPGGPVFTPELDGDSPSCVEALLCDIFMDAAGAFHDANRLVGNCDGDYGDLLLADTDLADLQRDLMMQIDAAVVSCKDYCAVYTDYEPLWMRTPTEALARFLSASKQGSLFSRSEVWADDPPNRRGDDLRSRTVEGCYGAEEFDANGSAAFVVPMDIDALAVAVGEIDSMVDTALRLPSSVDHERWLRVDMRPARQSLSVSLQQWRQGFADELRRRAEGLLRHLTSLVGRLTHAFPADRSGIQNHDDLIKAMGDVHTVRRLSAGMPARFEWLTAAHHCIETTARCKAPEMAAEIDSLQTAWQTIVHAAEHRQDALGPMQAKEGEALVARREEYAASVAAFRALFVERAPIRDGTSHAQAYREIDALAGDVAALERKGRELESYARMLGENAPLPPDVGDCWDYLRALKRLWDVAALADGLRTSYAPIAWADLDTRVLERDAKLVVGEVAAVGLHAFAKGAPAFHALQARARGMIDSARLVSDLCNSAIRPRHWNEFAAATSLRLAENGILTLGDVLAVDLPAHEADVAGVVDRAIKEQGMERLLADVSATWGAMEATFDTHDRTAVALVRVPPEFAVALEDNQVALQTMLASKYVVHFFSEITGWQQRLLAVESTMYLWMEVQSAWSYLESIFGGSADIRQQLPEDGERFDACDVRWRALMAAAVARSHVVTDLCADPRIMHELEVLRAQLALCEKALVAYLEHKRVAFPRFYFVSSADLLDILAKGAQPSLVSMHLSKLFGSLTQLEFQRGGDGAQRNIVVGLYSREGEYLELPSPCHLLGPVESWLGTLEKEMRGAVQHAISLAVASYGEKLREHWLLDHAAQAGLVAAQVWWTTEVAGAFVQLEEGRESAMKEYNKKLVAQLQRVITIVQGDLTPLDRQKIVTACTVDVHARDVVSSFIRDDATSQSHFGWQSQLRMAWDETTRVCAASICDARFHYDFEYLGNCPRLVMTPLTDRCYIALTQSLRLMMGGAPSGPAGTGKTETCKDLGRTLGMMVYVFNCSDQMDYRSLGDTFKGLAQTGAWGCFDEFNRISAEVLSVVSTQVKSILDALRAAKTHFDFQGDIISLRATVGLFVTMNPGYSGRVELPENIKALFRPCAMVVPDTELICEIMLLAEGFLETKALARKFSALYRLCSELLSRQDHYDWGLRAMKSVLVVAGAQKRADPDSPEDHVLLRAMRDSNVPKIVAADSVVFAGLINDLFPRMDIPRRVDAALDSAIRQSLRARRLQAEDPFVLKVTQLSELLAVRHSVFILGPAGTGKSAVWRTLADASERTGRRVLVHDMNPKAVSVDELFGCVDPLTREWHDGVFSSTMRTFSAMPGDDYKWIVLDGEIDPMWIESLNSVMDDSKVLTLASNERVAHTSSMRLVFEIDTLAHANPSTVSRAGILFMSAADFGWRAFVQSWVETLPHSPALRSNLLSLAERYVGTCLSYLSSGRVKTAVPMSDIGMVQALCVIVQDALCVRATLQAVERDAKVLEGLFAFACVWAFGGTLSREHAMDHRVEFSGWWRNEWRAVPAPARFPATGTVFDHAYDAVKGSFVPWEEMAGPEEARSVLVDAPMFVRTPDTIRTAHFLRVFVAAEKPAMIVGPGGCGKTALVRAVLGSLGDDRIPVDAPLHYFSSAATLQSALEKRLERKSGRSFGPPGLKKIVYFVDDLNMPQCDEFGTQSPHTLIRQHLDYGHWYDRAKLSLKHVSGVQYVACMNPTAGSFHINARLQRHFCVLAMDMPDADSIKRIYAAVFAQRSSEYLPAAAAAVDAMLSATVLLHRDVTTVFLPTAVNFHYLFNLRDLSRVFGGIAMASASAIRTPIDMCRLWMHETQRVYRDRMSSADDHRVFDDIQSRSLRRHLPDLDHSKLHDAPLIYANFAHGAAGEYGHVAGWAELKRCLETALDDHNDSNAAMDLVLFEDAMAHVCRIWRVLESPGGHALLIGVGGSGKQSLARLAAHLGGHEVHQISLRKGYELADFKEDVSGVLRAAGVREAGAVFLLTDSQIVSDDFLVLLNELLTTGYIEGLFSDDDAQAICDLVRSEARSVTGDDSRDACWSYFVAKVRRNLHVVLCFSPMESSFRARCRKFPSIFCASSIDWFMGWPAEALASVAARFVGEISLVPAEQRDAIVRFMAYVHQSVNQIAGEYAEVERRRIHTTPKTFLELLRLYRSLLEGRHGKLSVLVERLEGGLSRLTDASRQVDVLHDRLAVQEEQLSEKRKVTDAMLVQVDADSRHAESERKLADEEARVVDAITRDVAAKQQECAGDLALAEPALHAAVAALNTLNKPNLIELKSFNNPGKEVQQVMAATAIMLSRGKPIPRDLSWGSTKKAVGQVDKFLEALIAYDKDNIPDNVLAAVRPYTDNPEFNGAAIRVKSVAAAGLCDWITNVVKYYEIFRDVEPKRQALRQANASLAESQARLDACRRRVAEIDARLIDLRAAFAAATAEKDSVQRAADETAATIALADRLVRGLASEKLRWSASAATCRRQCVTMPGDVALASAFACYLGGYNRAYRAVLLRDKWVPYLREERVLLGDGVDPLAILADDRDMARWRSEGLPKDRFSQENAAILCNCLRWPLMVDPQMQGLRWLRAHEASRGLRVLRQGQRGFLDAIERGLAGGDPVLLESVPEHLDPVLEPLLSRATVKKGRFIRIGDKEVEFDRNFRLYLHSKMANPHFPPELQAQITMIDFTVTREGLEDQLLAEVVMRERPDLEQRKAELAAQQSAFREQLRELEDALLKRIATAEGNFLGDTQLVENLENTKATALEIEAKVREAERTEALIDETREKYRPVASRASLMYFLINDLHRINPMYQFSLAAFQSVFAKALAATLPSDTVERRVADLADAVTHGAFLYACRGLFERDRLTFATQMALQVLAGTPDSGIEPTKLDFVLRGPRVRNAVSPFEWMGAESWAAVTAIKSLAGFAALPADIQQSEKRWKKWYEAEVPEMEQLPQDWKHCTSFDRMCVIRALRPDRMTNAVAIFIGERMGRKYVELPAFRLADALADTDARSPVFFALSPGVDPVKDVEELAASSGGPTSLAMVSLGQGQEPLAEMRLRECRESGGWVLLQNIHLVQRWLPRLERLIEDFADEGVHPDARIFLTAEVLHGNGSLAVPASLLEASVKVTNEPPMGLRANLLQALDTFTTEAYEQCTNEEAYKGLLFSLCYFHAVVVERRRFGPQGWSRAYPFGIGDLKICRDVLLNHLEDQAAVPWTDLRYIVGEIMYGGHVTDTWDRRLCSTYLDVLFRPEILDGRSELAPGFSLPPVGDLASHRRHAEGMPAESPFLYGMHPNAEIGVFMARTDALFRSILELQPLVRGSGAGVAMEHKVKAVLDDILDRLPDVYPIDELLQRVVDRNPYVSVALQECALMNRLVTEMKRSLVQLELGLKGDLAISDVMDSLMRDLFLDAVPRSWSALAYPSLKSLGPWVDDLLLRARELESWISTFSLPVVVWLPGLFNPQAFLTAVMQVAARKNDWALDKLTLQCEVTRKDRDTVDDTPRDGAMLWGMCLEGARWDSALGVLQDGALKELHPRLPVMCVRAIPAQAGDRGDAAASRGMYRCPVYRTRDRGNTYVWSFNLRTKEPPSKWTLAGVAMLLSA* # ORIGINAL: g6678.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 40131 43522 . - . ID=g6678;Name=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 40131 43522 . - . ID=g6678.t1;Parent=g6678;Name=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 43202 43522 . - . ID=g6678.t1.exon1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 43202 43522 . - 0 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 42485 43101 . - . ID=g6678.t1.exon2;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 42485 43101 . - 0 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 42062 42176 . - . ID=g6678.t1.exon3;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 42062 42176 . - 1 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 41299 41855 . - . ID=g6678.t1.exon4;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 41299 41855 . - 0 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 41092 41177 . - . ID=g6678.t1.exon5;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 41092 41177 . - 1 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 40842 40952 . - . ID=g6678.t1.exon6;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 40842 40952 . - 2 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 40593 40745 . - . ID=g6678.t1.exon7;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 40593 40745 . - 2 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 40371 40498 . - . ID=g6678.t1.exon8;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 40371 40498 . - 2 ID=cds.g6678.t1;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 40131 40274 . - . ID=g6678.t1.exon9;Parent=g6678.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 40131 40274 . - 0 ID=cds.g6678.t1;Parent=g6678.t1 #PROT g6678.t1 g6678 MQTSCPHLARVRKPSASQIVYREECTQCFDSEVRPRPSFMSCALSNTESASDIAFHVGPHPQDSDTGVDVCLTCFNGGCRSHLSHAALHSQKFDHPIVLNIRRTIAESGNEQPAKITKLAIGLPGGLNAEEPQYKFAYRVCCYACGGLELDTRSADLPAVIETVMKAPSVNRTEELKAWSDEVVACEHTVMLAQQPGVQLASKSLAHCSDCELNSNLWLCLACGHLGCGRKNYDGSGGNNHAVDHFKQTAHGVVCKMGTITAEGSADIFCYACDETRLDTMLAEHLSHFGIELAKQSQTEKSTKELELDQNINCYMASILQSIIPLPAFRRNFASVTVDHRTTCTAASHAQCFRCQMEKMADGLLSGRYARTAAKHSSADDDAATAEAIALSLGGEGAAPASVAGGDGDTSQVGVRPSMFKSVAGKDHPEFSSMRQQDAFEFFQHLCARLERDAKAAGLGDAGSPASCFDFVMQQRLQCASCGGCRYSYTRENHAGVPMLVGADGRADLMTSLGLFVGEETVEFTCPGCKNKTSAVKRSRFFSTPDVLVVQVRRFVYEDWVPKKLDVEVDVPAVVELGQFIGGEPPADENVLPDDASAPPATGALLASVDALAVEQLVSMGFPQVRCEKALRATGNAGAEVAMNWILEHMDDPNIDIPDEPKAAPGATSAASQEHISALCDMGFTPAQARKALCETGGNMERAVDWLFSHSDDVGDSETSESGASDATNSMCGCTVRCGRCMC* # PASA_UPDATE: g6676.t1, single gene model update, valid-1, status:[pasa:asmbl_9904,status:3], valid-1 NODE_8_length_78047_cov_40.4926 . gene 35295 36535 . - . ID=g6676;Name=g6676.t1 NODE_8_length_78047_cov_40.4926 . mRNA 35295 36535 . - . ID=g6676.t1;Parent=g6676;Name=g6676.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 36487 36535 . - . ID=g6676.t1.utr5p1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . exon 36463 36535 . - . ID=g6676.t1.exon1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . CDS 36463 36486 . - 0 ID=cds.g6676.t1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . exon 36213 36350 . - . ID=g6676.t1.exon2;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . CDS 36213 36350 . - 0 ID=cds.g6676.t1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . exon 36083 36131 . - . ID=g6676.t1.exon3;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . CDS 36083 36131 . - 0 ID=cds.g6676.t1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . exon 35938 35988 . - . ID=g6676.t1.exon4;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . CDS 35938 35988 . - 2 ID=cds.g6676.t1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . exon 35295 35669 . - . ID=g6676.t1.exon5;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . CDS 35392 35669 . - 2 ID=cds.g6676.t1;Parent=g6676.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 35295 35391 . - . ID=g6676.t1.utr3p1;Parent=g6676.t1 #PROT g6676.t1 g6676 MTNVRYELLSTEAPNSVGSVEMLPIEEDTLPAYDGAEGKLPSYEEVRFQKGEDSGPVIISFAMEPVGELTVDGMPLGSELSFMGSFLVSFFFNWIGYLVAYCMSTTLAGQCGALAGFGLDMVKIGLLIRHYDYVRQASEYGHYQQFVVWAFVLVGWLSFFRGLSLFLTYKKAARFQARD* # ORIGINAL: g6674.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 29687 31969 . + . ID=g6674;Name=g6674.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 29687 31969 . + . ID=g6674.t1;Parent=g6674;Name=g6674.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 29687 31969 . + . ID=g6674.t1.exon1;Parent=g6674.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 29687 31969 . + 0 ID=cds.g6674.t1;Parent=g6674.t1 #PROT g6674.t1 g6674 MASLSNRIRSGLMGYLGSGTTPAASPTNENVARTHAPLGASSPPTTPRQRGSAQSAQSPSQLQAMSAATPSHEGVGGTPRFAAQGLVTGGRSFMQLLRGSSDSSPASGGNSTPPLSRGNSRAGLAEISREGRGAKLDLACASIFHALQQAHPPAITQHVQAIAAMLCDEDSDKAASQPCFRAFLHKGVLERLCSNKVLDAVPHLHYDLLHLFGVLLKRVRHHPILAHPQFRNALNWTLHSCNNVAPSTDIDDALVLLLHTICDCITRDNSLLVLFFDRHIGGASTKDGGQFVVFSLLTRYIHMDHMSLTDRAYDGIRLVLHLAVTNESLAEYIAIYSNFCDILALGLGGLYSTLPMTMLQSDDALTAREGRLLLRSLNLCCDAVRVGPANVASKLLGLFRSGFLQSVLVPSLLQPSDDAAAAATVHLTAMLRSIVDARVMRVVLDCLFAEAADNAVPSDVFCKRISEGGDVLCCSTLRLFHVLLELNCEDVVFELALRHLLEGRHVPVGMPCCTHDGESLVESARRFLSLAPVTPHSPDKSNFADYLAAAGVGVRHCAWACRDWSLPYSRCAGSASTGATAEDAQRTPFDGGPFIHALFVRLRRMLKQPVRTNLLLTAVISRLAMYPQPLLRSFLLDCRLVLAPGVVSLHDVLRKIVADVSELARTTHGFAASLLSARASLAHGVHIGRRASTSDLGGGRAREGADALMAVVCYEEFVKELAAIAQEHVTVSWGDAAFAIGDESVGAVTPAAISAVSAHT* # ORIGINAL: g6684.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 56829 59017 . - . ID=g6684;Name=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 56829 59017 . - . ID=g6684.t1;Parent=g6684;Name=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 58924 59017 . - . ID=g6684.t1.exon1;Parent=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 58924 59017 . - 0 ID=cds.g6684.t1;Parent=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 58348 58722 . - . ID=g6684.t1.exon2;Parent=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 58348 58722 . - 2 ID=cds.g6684.t1;Parent=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 56829 57547 . - . ID=g6684.t1.exon3;Parent=g6684.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 56829 57547 . - 2 ID=cds.g6684.t1;Parent=g6684.t1 #PROT g6684.t1 g6684 MAAGHPSPHVYDALLAETIPLHPRILQGLERARIRSLRDVLYRAPPELLRTAALSEGDVAVLYSAVRGVVGIPVFTAFQLTQGNDSPPNQRGEDGEVPHTLRLATGCAVLDEALGGGILSRGITEIVGESGSGKTQFCLQLCLTVQLPQALGGLAGGAVYFSTEDVFPHKRLHQMIPHFTRTYASQLGDVDPGDNILVDHLSSLDEQWEAINVRLPALLSRTNVRLVVIDSIAALYRAHMAEEFVDGEAHLKSSSISRAKSLGTLGARLKAISDEYHVPIVCVNQVSDAFNKDGDNECERQGDAENDPRLGHTTAVIPALGLVWSAALNVRLMLRRWRLPPDPREAAHGMDGALRRTMSVVLAPHLANVSSDFEVVAGGVRGRRRLPTSEDACSM* # ORIGINAL: g6682.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 51880 54091 . + . ID=g6682;Name=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 51880 54091 . + . ID=g6682.t1;Parent=g6682;Name=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 51880 52006 . + . ID=g6682.t1.exon1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 51880 52006 . + 0 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 52236 52309 . + . ID=g6682.t1.exon2;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 52236 52309 . + 2 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 52417 52637 . + . ID=g6682.t1.exon3;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 52417 52637 . + 0 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 52746 52854 . + . ID=g6682.t1.exon4;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 52746 52854 . + 1 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 53049 53262 . + . ID=g6682.t1.exon5;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 53049 53262 . + 0 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 53446 53468 . + . ID=g6682.t1.exon6;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 53446 53468 . + 2 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 53561 53740 . + . ID=g6682.t1.exon7;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 53561 53740 . + 0 ID=cds.g6682.t1;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 53837 54091 . + . ID=g6682.t1.exon8;Parent=g6682.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 53837 54091 . + 0 ID=cds.g6682.t1;Parent=g6682.t1 #PROT g6682.t1 g6682 MAGVSPADVRAVVSKCLGQVQAQLYDSVVPFWLRHSLDRVNGGYFNCLDRDGTPFDTKKHIWLQGRQVWMLSKLYNESERLKGDPALLDAARLGVDFLRKHASRDDGRVYFSVTAEGQPHFMQRKMFAECFFLMALAEYGRASGDASCKAEALAVFEQVLHYVDHPGVLGRPQLAGQRPTSELAVPMILLNVIDELRTAFADQSLYSERAEWCVNRIRQHVVDAKGWVLENVSAVDGTPMLDSPEGRLINPGHAIEAGWFLLAYAIKSQRKDLYDLAAKMVDDSFEIGWDKQYGGGILYFVDCLGHSPVQLEWSMKLWWPHNEAMVAYALLFKHFRDDKYLRRFVQVLEYSLSHFADAEHGEWFGYLDRRGVVTHNFKGGPYKVTADLTDVTQFYLSSTR* # PASA_UPDATE: g6686.t1, single gene model update, valid-1, status:[pasa:asmbl_9908,status:12], valid-1 NODE_8_length_78047_cov_40.4926 . gene 62718 69221 . - . ID=g6686;Name=g6686.t1 NODE_8_length_78047_cov_40.4926 . mRNA 62718 69221 . - . ID=g6686.t1;Parent=g6686;Name=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 69144 69221 . - . ID=g6686.t1.exon1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 69144 69221 . - 0 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 68304 68907 . - . ID=g6686.t1.exon2;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 68304 68907 . - 0 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 66981 68000 . - . ID=g6686.t1.exon3;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 66981 68000 . - 2 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 66654 66820 . - . ID=g6686.t1.exon4;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 66654 66820 . - 2 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 66080 66523 . - . ID=g6686.t1.exon5;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 66080 66523 . - 0 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 65197 65870 . - . ID=g6686.t1.exon6;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 65197 65870 . - 0 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 64877 65038 . - . ID=g6686.t1.exon7;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 64877 65038 . - 1 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 64299 64779 . - . ID=g6686.t1.exon8;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 64299 64779 . - 1 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 63483 64182 . - . ID=g6686.t1.exon9;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 63483 64182 . - 0 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 63143 63364 . - . ID=g6686.t1.exon10;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 63143 63364 . - 2 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . exon 62718 62962 . - . ID=g6686.t1.exon11;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . CDS 62865 62962 . - 2 ID=cds.g6686.t1;Parent=g6686.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 62718 62864 . - . ID=g6686.t1.utr3p1;Parent=g6686.t1 #PROT g6686.t1 g6686 MDGGSHRRSLGNVAFPAQVPASAVHMNAGFMGGMGANPAMMVPIGQGAGVRPNNNNNNNMGMGMGMGMGMGMNANIGANAGNGNMNPGLNFNAMNAGLNGSLSGGMGPGMGLGMGMGMGMGNMQQMTPQQLQQLQQVTMQQMQQLLQMQQMVGMMGGAGPGGNNSQQGGQGVAQAASLEPSAGQAPSQWNPQTEKRPLSGSTAGAGGSAAGLMTSTTLQESLSTSSQTNPSVFAVHVAAGTGEKNNLLNLLKSGQNPDMPDGSGRRPLLYTVLSDSRACAELLLKFKADINATDGDGRTAIHWAAYHGKAKMLQLLVEKGGDWRKRDVDGRNALHWCVGNQDSKCVMVLLKYVTPEDLEAGDREQMTALHWAAFHEAPHNIKALLKAGASPKTSDIEGKTALHWCAANKSGQCARLIIQTGPGLINVKDKQGRTPLHLAVGENATDVVDALASTSEFDPSPKDLSDRTPLHWAAVVGSRDLVRLLIAKGAKDSVRDKNGATALHFAAQQNHGACIQALLTAEGTKVLGDNNGRQPLVWAIQRNNVDAVQALLKMHVDPNAFDSAGSTALHEAAHLANVRCVELLLQAGASPNAMDSRNQTPLYRACEIGSPDIVLLLLQKSAQVNVRDVNGLTPLHFACSNNHAYVAQILLTNGADPDARDETGKPPLHNAAFAGHTTCLLALCDAGANADAQDKEGISALHWAALEGRFECVVGLLRYFAYPNFMEIGEKRYTPYDYAMVNGHSDCARALQESGGLSIMAIRVLAIVMIQSAWRGFRVRMLYRRLKEEKKKLGEEEFRRREAQRQADEERKREAAAALAGHERKIKDEDGRRQREDQERRQREEEARRREEESRKKMDDTRRGEDDVRKKEDEARRRAEEARRKEEDAKRAVDDAKRREEERAAAERRAVSMAQMAEHERRMKEEEARRLELEKQIAALKERQAAEEQMDTQRRTQEEEEQRMQLEKQIRELTERQAAERAAEDERRQKEEELERERQRREVELELERRRKEAEAEKIRRQREIEFEFQRRMQEEEEEKRRKAMEEEQRLREDERLRILAEEERLRIEREEAELAALEAERQLRELEQRAADEEERRRRDKEDRERRRKEEEARLIAEIRQQAMDDDERKRIEADRASKAQAEQHERELRELREKIENDEREEREREERERRQEEERLRREQEEREKAEAIEIEMRIRAEELRKEQEEKAKLRAIAEERKRKIEEERRRRVEAKRLQMEEEQRRVEQEKAEQRAKREEAVRRDQEKRKMALDKRRAEEQERIDRNEALKQRKKEEAAAVLLQANVRGFLARKERRRLHNIRVIVRAATVIQRAWRRYVRHRERRQRESDRRVRMLAPAPDGSDNYGDVREEAEALLARAASSHARSEIAKQREIAALIIQLAWRKYQRKFLRPGFRKPVPVLHEWSPAVLAQRQRERIQKIYGESMDLAPMYVPTPVKRMARPEEMWEAAPATDSYRFALTQYWDESKYLDVASLPSYRSNATVQKPTWDESVAGGPQNFTSIFRKNQENFNQFWRPEASSPSSMGAR* # ORIGINAL: g6680.t1 original gene structure, not modified by PASA NODE_8_length_78047_cov_40.4926 AUGUSTUS gene 48460 49733 . + . ID=g6680;Name=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS mRNA 48460 49733 . + . ID=g6680.t1;Parent=g6680;Name=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 48460 48984 . + . ID=g6680.t1.exon1;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 48460 48984 . + 0 ID=cds.g6680.t1;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 49148 49191 . + . ID=g6680.t1.exon2;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 49148 49191 . + 0 ID=cds.g6680.t1;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 49350 49464 . + . ID=g6680.t1.exon3;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 49350 49464 . + 1 ID=cds.g6680.t1;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS exon 49680 49733 . + . ID=g6680.t1.exon4;Parent=g6680.t1 NODE_8_length_78047_cov_40.4926 AUGUSTUS CDS 49680 49733 . + 0 ID=cds.g6680.t1;Parent=g6680.t1 #PROT g6680.t1 g6680 MSDEFESRESQERDVEALLERLSTLKADYETTAGVSETEVILHKTSLCGRMFVCTSLMMTEAVHCAASQRDTRPQSERPSMDKCRRVCGTVVRKVVGVWDSAVRENIELVRGAMLGAEAPPDRGAAGDTDSQVGSAGDLRRATKEKIGPFGDVEEVFGVLSRQLTRGLLEPIAQKIEDDCTSACSAALTEQQADCLEQAATFGQMCQCIESAMDEWGRKQRKRQIEAQIEQLERNLKALKEAKTA* # PASA_UPDATE: g6672.t1, single gene model update, valid-1, status:[pasa:asmbl_9915,status:12], valid-1 NODE_8_length_78047_cov_40.4926 . gene 26742 27701 . + . ID=g6672;Name=g6672.t1 NODE_8_length_78047_cov_40.4926 . mRNA 26742 27701 . + . ID=g6672.t1;Parent=g6672;Name=g6672.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 26742 26842 . + . ID=g6672.t1.utr5p1;Parent=g6672.t1 NODE_8_length_78047_cov_40.4926 . exon 26742 27701 . + . ID=g6672.t1.exon1;Parent=g6672.t1 NODE_8_length_78047_cov_40.4926 . CDS 26843 27646 . + 0 ID=cds.g6672.t1;Parent=g6672.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 27647 27701 . + . ID=g6672.t1.utr3p1;Parent=g6672.t1 #PROT g6672.t1 g6672 MYRLITIRPSHYNEKARWALDMFAIPYMEEPHAPMLHTLPVLWATRGAGKRDAVSSPLSTPVLVLDDGDVLTDSTAIMRFAASSSPQASIFLSDAALELDRRFSDKLGAHTRRYLYNQLLPRTDLFTEIASDNLGWWEASATSALMPVLVAGLRRGLNVTDTGAQRSLEVVRSEFEFVSNLLSDGRQFILGDTFTAADLSFATMASLVLLVQNSEGYGAHVPAVSKWPPAMQETVQFFRNTPAGNHALKMFSSHRGKRIVPCGKGKP* # PASA_UPDATE: g6669.t1, single gene model update, valid-1, status:[pasa:asmbl_9910,status:12], valid-1 NODE_8_length_78047_cov_40.4926 . gene 17673 21547 . + . ID=g6669;Name=g6669.t1 NODE_8_length_78047_cov_40.4926 . mRNA 17673 21547 . + . ID=g6669.t1;Parent=g6669;Name=g6669.t1 NODE_8_length_78047_cov_40.4926 . exon 17673 17718 . + . ID=g6669.t1.exon1;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . CDS 17673 17718 . + 0 ID=cds.g6669.t1;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . exon 17839 18284 . + . ID=g6669.t1.exon2;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . CDS 17839 18284 . + 2 ID=cds.g6669.t1;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . exon 18406 18458 . + . ID=g6669.t1.exon3;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . CDS 18406 18458 . + 0 ID=cds.g6669.t1;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . exon 18554 21547 . + . ID=g6669.t1.exon4;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . CDS 18554 21500 . + 1 ID=cds.g6669.t1;Parent=g6669.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 21501 21547 . + . ID=g6669.t1.utr3p1;Parent=g6669.t1 #PROT g6669.t1 g6669 MDISELRKLLKGDSRGPGRPEHDGSGSSPHGQVRSGPGHLPGRTPSPLSRGRRDGGSSAGKGRSPAQQAPVSQQSSQSQLSQGQSQAMTAQAEGASQPSTLPASASVSASASSSSPASAANLAGTVPGIGQNPTTNDSSRADNSPAKTGRRVSIRPFSAPGAKEEDDEGHKSSASVLPGITRVKSATVKRESPDLAAVISSTTMSSAPSVRSPSVLASVAMSGPVTSASQNERVGGATAAVDTRRAGMHKGVMPASLVRSRIPEAYHIYNDELVTSHGSGDGGDADDRRVTDGRLVVRRFPLALPTGTRKELVYLRQVVERMLADAQSDDGGGGQEGGYPMEKWRRTHSALFSGLHEMARQVCVGSVERGTAMAELFEKQDSLFQAVFKSLETLTRTLDSAQEGMTDAIEAAEEACRSRIEDIEAVMVERELCLVEHIQVLEAVAKAKQQQGTAHPPTQTQTQPQPSIAGMRKPSFIMQPSMLAAPRSPQTPVSPNAGGSQSPQQQTHPLRKGSINRRNSVLTEMLIMEAAAPPPVDPEQLPVVQSLRSERAVQGERIRKLEEQLAGSEKELGASRALLADTAGALEKTSRELERTRSLYAQFEERSVGKQTAQVWRREKVSRFCMFCESGRLQLLAEIQEAYHKAPSHKAMRELQYWEIELRLLQVERDRLARITAPDSLPAHPLAALCGRAAVEARALDPRRAVKSVSWVGSIVRMAYDAMSADILRRGELLPGRCDVPFAEIVYNTLLTRYGSCAAVDAVALDLVCALKAHKEASRWLGMFSEAVEGRLRPSCLRLRLQVLAHVEAAVRKPVDRETHYAAHVSLEAAQRIACECLPGIVDEDRKQVVARLTEASRPLKGAGDSGARTDRVVAVPVLVDTCSAVFERDVERFDAAVRSHLEEAAIDGFLDFAGAHGVVSRIDPSMTPMDTADAFKAAQRLLAASDPLGSHLPQPQHEPDGSVADARHVARISSGLVSVGAFAEVLHFRGRLFLRPLNLFHIPTRSDLSAVDAGGLFDAMARDWSQSFEPLIDAVLFSLGDVGTTDAAADGALLAETRAKLVHELSARSSLSRTVDLARRVTRAAEDALRHVRGLAAESHSRYLQRELALRRELLAQMSAGAATAAGIQGSEDDGDESAAAAPEAAQAMSLQQRVRQLLLQH* # PASA_UPDATE: g6667.t1, single gene model update, valid-1, status:[pasa:asmbl_9909,status:3], valid-1 NODE_8_length_78047_cov_40.4926 . gene 149 1820 . + . ID=g6667;Name=g6667.t1 NODE_8_length_78047_cov_40.4926 . mRNA 149 1820 . + . ID=g6667.t1;Parent=g6667;Name=g6667.t1 NODE_8_length_78047_cov_40.4926 . five_prime_UTR 149 212 . + . ID=g6667.t1.utr5p1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . exon 149 287 . + . ID=g6667.t1.exon1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . CDS 213 287 . + 0 ID=cds.g6667.t1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . exon 429 504 . + . ID=g6667.t1.exon2;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . CDS 429 504 . + 0 ID=cds.g6667.t1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . exon 721 848 . + . ID=g6667.t1.exon3;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . CDS 721 848 . + 2 ID=cds.g6667.t1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . exon 1163 1390 . + . ID=g6667.t1.exon4;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . CDS 1163 1390 . + 0 ID=cds.g6667.t1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . exon 1617 1820 . + . ID=g6667.t1.exon5;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . CDS 1617 1796 . + 0 ID=cds.g6667.t1;Parent=g6667.t1 NODE_8_length_78047_cov_40.4926 . three_prime_UTR 1797 1820 . + . ID=g6667.t1.utr3p1;Parent=g6667.t1 #PROT g6667.t1 g6667 MSDTTKQADELHEKGQYKQTFDLLKDALEKEPKNADLLWRLARAHYNLGEESTDKTAKEKHIRDGLELASQALAISADNFACHKWYGVLLSGLGDFISTKEKIQNAFKIREHIEQAIKLNGKDATSHHILGKWCLGVANIGWMERKLAATLFGSPPEATLDDALKHLLDASAIDPTFKRNMVTVADVYLQQKKYAEAKEWYNKALAVASVDKAEEALDVHSKNALKKL* # ORIGINAL: g2162.t1 original gene structure, not modified by PASA NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS gene 6633 7448 . - . ID=g2162;Name=g2162.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS mRNA 6633 7448 . - . ID=g2162.t1;Parent=g2162;Name=g2162.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 6633 7448 . - . ID=g2162.t1.exon1;Parent=g2162.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 6633 7448 . - 0 ID=cds.g2162.t1;Parent=g2162.t1 #PROT g2162.t1 g2162 MGHGRGRKTKVSAERSLLSSDLNARFRRTTPATLPAATCNYCNRTVTRGGPRLLRPEVEHIWEVQFFVAVTLRYYRNARRVEDIPERVLDAIETVVNANSNLCQSCGRCNMAKAHAFKSFIANDGFSLKDDDDMTSRLQSSPARMVNKSGGDDPVNQEHATEIARTALQATYELLVEALRRHDRLCDDYLWLGRGLLVNTENERLTHFMGWIKSRMYRRWLDDESPEDDNDSSSSDDDGGSTPVGGNPDKGRGNDRRDPPPPPGAAPIPVA* # ORIGINAL: g2163.t1 original gene structure, not modified by PASA NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS gene 8278 8754 . - . ID=g2163;Name=g2163.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS mRNA 8278 8754 . - . ID=g2163.t1;Parent=g2163;Name=g2163.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 8278 8754 . - . ID=g2163.t1.exon1;Parent=g2163.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 8278 8754 . - 0 ID=cds.g2163.t1;Parent=g2163.t1 #PROT g2163.t1 g2163 MELDDAQDRSEVSVSSSTSGSSAMSQKRKTMRDDLCDDYGSEQTRKKVRSEPRADEFKQAMRALWNLAMRLIEPSKHSSNVYDTIRSAIQTEFDTVMDVYASGDDIQHALRVLLRTLGIMLQPIYMFEETDARKSIQGEVAQAGKRAKDAFDRMRVKG* # ORIGINAL: g2164.t1 original gene structure, not modified by PASA NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS gene 8842 9135 . + . ID=g2164;Name=g2164.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS mRNA 8842 9135 . + . ID=g2164.t1;Parent=g2164;Name=g2164.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 8842 9135 . + . ID=g2164.t1.exon1;Parent=g2164.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 8842 9135 . + 0 ID=cds.g2164.t1;Parent=g2164.t1 #PROT g2164.t1 g2164 MRATLQAQFGGIFVKMLNASNTSATFAGVLSNQLRNSTSPLPKLQRWASYASQTGSDYGDDAMSTCSNSFNGMTLSSAFENAFINPARLWTSIPSLI* # ORIGINAL: g2161.t1 original gene structure, not modified by PASA NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS gene 4160 5888 . - . ID=g2161;Name=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS mRNA 4160 5888 . - . ID=g2161.t1;Parent=g2161;Name=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 5482 5888 . - . ID=g2161.t1.exon1;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 5482 5888 . - 0 ID=cds.g2161.t1;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 4837 5344 . - . ID=g2161.t1.exon2;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 4837 5344 . - 1 ID=cds.g2161.t1;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 4422 4479 . - . ID=g2161.t1.exon3;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 4422 4479 . - 0 ID=cds.g2161.t1;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS exon 4160 4308 . - . ID=g2161.t1.exon4;Parent=g2161.t1 NODE_1749_length_9411_cov_33.9106_potentialcontaminant AUGUSTUS CDS 4160 4308 . - 2 ID=cds.g2161.t1;Parent=g2161.t1 #PROT g2161.t1 g2161 MACCDTVQLAAERGHIECMKVLRDGGVDVSTYSYIFEWYGSAESAVPEERRVFGAVEGDSMSRTALHSACAFGHLPLVKWLVDNGASVDCEIYEGYGLTPLFCAVYYRHYDVARWLLEAGANPDACVISPVYRDEWDKISGTCCGVHGMTPVYVACIKLDLASVRLLLEFGANASLGERHYGEYQHQRCDPDGPLVRAVNESVYFPIGAPEWQVALDIAKALAAGGADLHADGVLNSVAYFGLDALKHFLAAGLSIELSASGCNASLDILRYFLGHVPNFATSYAGLDTMVLSCPQLSLCDLSEVITRVYAFFGAPVEAALQYSADGNSYVPTLQHLCRRVIIAHDLKFADPDVGLPQHLVDYLSVTISNEML* # ORIGINAL: g12888.t1 original gene structure, not modified by PASA NODE_5161_length_989_cov_85.2527 AUGUSTUS gene 40 584 . + . ID=g12888;Name=g12888.t1 NODE_5161_length_989_cov_85.2527 AUGUSTUS mRNA 40 584 . + . ID=g12888.t1;Parent=g12888;Name=g12888.t1 NODE_5161_length_989_cov_85.2527 AUGUSTUS exon 40 584 . + . ID=g12888.t1.exon1;Parent=g12888.t1 NODE_5161_length_989_cov_85.2527 AUGUSTUS CDS 40 584 . + 2 ID=cds.g12888.t1;Parent=g12888.t1 #PROT g12888.t1 g12888 CVLLIFSAGLLLGMMVYANGYFKEKAVPAPAKNLNIESLLAIDEINGALEHDEHEGDMHSPEPWKSVPDDYSVDADTEDVGAQPTDPHAGVDILMTSDMNTLIGMVAAINSVVVNAKEAKPRFHIVVDSRKTAYAVNTWVHAYHPDLILDTVIFDASLVRGRILIRGTRKELGSPVRACL* # ORIGINAL: g10980.t1 original gene structure, not modified by PASA NODE_3299_length_3799_cov_44.8206 AUGUSTUS gene 1666 2594 . - . ID=g10980;Name=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS mRNA 1666 2594 . - . ID=g10980.t1;Parent=g10980;Name=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS exon 2539 2594 . - . ID=g10980.t1.exon1;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS CDS 2539 2594 . - 0 ID=cds.g10980.t1;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS exon 2218 2360 . - . ID=g10980.t1.exon2;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS CDS 2218 2360 . - 1 ID=cds.g10980.t1;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS exon 1927 2032 . - . ID=g10980.t1.exon3;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS CDS 1927 2032 . - 2 ID=cds.g10980.t1;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS exon 1666 1822 . - . ID=g10980.t1.exon4;Parent=g10980.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS CDS 1666 1822 . - 1 ID=cds.g10980.t1;Parent=g10980.t1 #PROT g10980.t1 g10980 MFWSLFCAVVCVVAVRRYSIVHRYLLADNRHFTFYIWNRFFLKYELAKYILVPIYVFTAWSIWLVLDAAHIRPALWRVVLALATVAVLVPAPLVEPRYFIIPFILLRLHMPLLQGRQLYCEIALYAAVNTVVLSLFLFAPFKWADGSVQRFMW* # ORIGINAL: g10979.t1 original gene structure, not modified by PASA NODE_3299_length_3799_cov_44.8206 AUGUSTUS gene 2 206 . + . ID=g10979;Name=g10979.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS mRNA 2 206 . + . ID=g10979.t1;Parent=g10979;Name=g10979.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS exon 2 206 . + . ID=g10979.t1.exon1;Parent=g10979.t1 NODE_3299_length_3799_cov_44.8206 AUGUSTUS CDS 2 206 . + 1 ID=cds.g10979.t1;Parent=g10979.t1 #PROT g10979.t1 g10979 MTASSGETVASFAITNKIPKRPFLADSSAREKRDRRRTPKPGSPEVLSVPEELGANPPATDPRKAAY* # ORIGINAL: g13154.t1 original gene structure, not modified by PASA NODE_1199_length_13170_cov_40.9179 AUGUSTUS gene 3034 5970 . - . ID=g13154;Name=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS mRNA 3034 5970 . - . ID=g13154.t1;Parent=g13154;Name=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 5872 5970 . - . ID=g13154.t1.exon1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 5872 5970 . - 0 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 5554 5695 . - . ID=g13154.t1.exon2;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 5554 5695 . - 0 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 5121 5305 . - . ID=g13154.t1.exon3;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 5121 5305 . - 2 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 4924 5000 . - . ID=g13154.t1.exon4;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 4924 5000 . - 0 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 4478 4650 . - . ID=g13154.t1.exon5;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 4478 4650 . - 1 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 4116 4288 . - . ID=g13154.t1.exon6;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 4116 4288 . - 2 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 3682 3909 . - . ID=g13154.t1.exon7;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 3682 3909 . - 0 ID=cds.g13154.t1;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 3034 3444 . - . ID=g13154.t1.exon8;Parent=g13154.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 3034 3444 . - 0 ID=cds.g13154.t1;Parent=g13154.t1 #PROT g13154.t1 g13154 MSDMDQVKKFLQRIGLPQYEKIFEVEGFDTLAALQDATEDDLLAISVKGSHAKLLLKHAASIQSDGTFGSPPQGSLNVGSPTTQSLLLNIKIGDSGFLSGRSTPIMSMSPSTSGLLHAQKTEFPSTSPLSNGAFKQTPADTINVVLVGYGYGGRVIHAPLIKLAHGLRLYGVVARAADNRSRAEHDHGCKTFGSYEDALADPDVHVVVIATPHETHCPMAIQALNAKKHVVVDKVMCLSVAECDKMIAASRANNRILTVFQNRRWDGDFLTVRKLLADESLGKVRWLEMAYQKFGQSAKAWKSASIENGGGTFLDLGAHCVDQMLLLFPLKVVSVYCRMHFDFGNDGTDSHALLMLGFEDGSTGVIDTGSLAAIRKPRYYICGTKGAYIKHGVDPQEDALVRGNIDMAIEPESAYGRTSTGDGSEVPVPTVRGRWRNFYEGLSDALLSGGKTIEGFPIGDLTKVPVTPESVARQIAVLEAAVKSAKANVALEVSI* # PASA_UPDATE: g13153.t1, single gene model update, valid-1, status:[pasa:asmbl_744,status:12], valid-1 NODE_1199_length_13170_cov_40.9179 . gene 216 2561 . + . ID=g13153;Name=g13153.t1 NODE_1199_length_13170_cov_40.9179 . mRNA 216 2561 . + . ID=g13153.t1;Parent=g13153;Name=g13153.t1 NODE_1199_length_13170_cov_40.9179 . exon 216 313 . + . ID=g13153.t1.exon1;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . CDS 216 313 . + 0 ID=cds.g13153.t1;Parent=g13153.t1;5_prime_partial=true NODE_1199_length_13170_cov_40.9179 . exon 565 773 . + . ID=g13153.t1.exon2;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . CDS 565 773 . + 1 ID=cds.g13153.t1;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . exon 1120 1415 . + . ID=g13153.t1.exon3;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . CDS 1120 1415 . + 2 ID=cds.g13153.t1;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . exon 1714 1868 . + . ID=g13153.t1.exon4;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . CDS 1714 1868 . + 0 ID=cds.g13153.t1;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . exon 2156 2561 . + . ID=g13153.t1.exon5;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . CDS 2156 2402 . + 1 ID=cds.g13153.t1;Parent=g13153.t1 NODE_1199_length_13170_cov_40.9179 . three_prime_UTR 2403 2561 . + . ID=g13153.t1.utr3p1;Parent=g13153.t1 #PROT g13153.t1 g13153 SVRAGLRAPILYDRRLLRRFMFTEGSYGSTSVRIEDKLVSLVASLSTAGKGRGLCVFRVGDPVASVFGAATISLGPEGAAPRGAVGFTVRTNGPVAAAAQGYVDVINHNQWASWGVLKLEGVRIGASFKGQPDRFSVPESSSVSTAAAPAKKLPDVPKGETERGGSTTFRRMSNALRHSSLSEANFRVGYGKTFVSTRTGEPEFFEMAVSVENFGRRIVASYFHHMLFPIMDRLRHVSFAGQFVHSVHGDLEGSSSDKTNPNVLILGAGWQVTNNLVVRAKADSTGNVDALIGGISWASYPKLVLTVSAGANVIGALGGEQFGPRVGFSLSVDG* # ORIGINAL: g13155.t1 original gene structure, not modified by PASA NODE_1199_length_13170_cov_40.9179 AUGUSTUS gene 7334 13071 . + . ID=g13155;Name=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS mRNA 7334 13071 . + . ID=g13155.t1;Parent=g13155;Name=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 7334 7742 . + . ID=g13155.t1.exon1;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 7334 7742 . + 0 ID=cds.g13155.t1;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 7907 7996 . + . ID=g13155.t1.exon2;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 7907 7996 . + 2 ID=cds.g13155.t1;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 8149 8220 . + . ID=g13155.t1.exon3;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 8149 8220 . + 2 ID=cds.g13155.t1;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS exon 8426 13071 . + . ID=g13155.t1.exon4;Parent=g13155.t1 NODE_1199_length_13170_cov_40.9179 AUGUSTUS CDS 8426 13071 . + 2 ID=cds.g13155.t1;Parent=g13155.t1 #PROT g13155.t1 g13155 MDDYGYDAQGVDDGSEEEFDRESGNTEVIESWRNDSGLEHVARPTTVKDKKEKDPTADLHRRVRNIIANSPLSQKKHIVKKKRAASESTTPATTVSVNGDTYPMKTASTTVGNLATDSAAETLAGEDEEYSKLLLSGENQAYLYGCLCGTEPCSITLDEHFPCTFKGCTAKFHTRPPSDSVFKIHRRIQHASNDVHLGSELEQEVLLQRFRKTEPLVHSLVSLAASPSAPSENAISAVNRASAKPVPSDAGTSILGVKMEPEHEWTDSAEWLKTYGLRPKKLTAADLLSGGFSHKESFVASIDKHVSARYCESLFRHNHVVGGDVILGDGGSENIITRHVHFDPSLATYYEKRMNKAIGVYRRRLAWLCSGTRAAFGLVTGSRVVIAVDTTGGEERLDYLKESLSALLLEQFLRSQEVSPKISFNVVAYAAHGASMFRPRMAPVDEGSIGQAREWVQSLTSGTASTAAQRILAGAGGDAWAGLRLALSNEDADTVYMIGGTRANQRKGVLCALAAELLAGRTTRIHAVLLECADPAALIQYRALADECGGKFHRAWRDPSRGTSICLCEGLDVDAMREELHRAEEIVRQVRSHSVQYGTGKSRRAKLPGNDDGELPSEAPKPRKKRAERFDGPVVASKEWLKEHGLRSQHLGIYDVLSRDAFDHSETTGTLQADCDSARICAGMTHFRWHDGTIKHIHVDQAALREYEQRLGKAVDLFDRRVTWLRSGSRQAFGTIIEDRLIIAIDASAHILPRTEQFRQHLKTLFAEQLIHKRKFNIIRYASTAESYMPSLIEVTPEALDKAWAWVCATRPAGQPNQINAVNLALADRDADAVYLIAAGMPSHAGDAAVEELRKAQQLDTSRKLRVHSISYGCTEGITNAGLRKLAEISGGRFHYFGESAGGGLLLESDDVALIRSEINRARQYSEQSSKLRADNELRRMKQQAVDAAKKQAQTPDAGRSASPNKRALSSPQPNRPTSAMGTSGSRTRDIRQLPVRPQSAGANESRDVASTAAFDPFPDEIGEIGRMQIEELLTESTSVEEMVVLLQQLRRSDSGRDRAMYTCLVRTLFDYYHWLHRQSEPRLAIIATMFGQLVRHRLVSSTSLAFALRYILDAVRKDADSKEFRFAALSLLQFRPRLHEWTQYCRHIRDIPHFFQLPAKITDHVIKILKAATSVGKDPTSELVAGRLPFVIGGGGASFQQQFEGMQRAGEHVDDNDDPHATILSGGVEVYPREAVPQPVSMETARNITSIAALADAGIAKLTMATRPVFDDDARRGRSPTPHSPGARRSNSRSPLRANDSFDSAIATADDEVFAVAKTVESARNSSANSSPEPISDRSSSPTRRAQRPSSAGTDPASVIGNNRQDLMNSSFASEASSASVRSNRANRTPVPSRSITASSSSPVRPSSSSGRRSAKPTSPQKGQAGFPNLLDSIATTRTRKARRSAGPVAKEAGEPAHIVSKYDAPATVQFPDDELAMLSIDWIARHGLENRGLDFPRFSATFAELPGGSGATMTKSLLVDKYEKAIKRQLRRYGARLRWLQTGSRRIFGTVPERHVVFVIDVSGSMEEHMDLLRHEIASLVQSQLGPGVAFSLVRYSGRVEPWSEKLVSWSAQSVADAREWVMRCEAGGSTNTMEALRTALHVDGVDAVYLLTDGQPDQSTDDILNAVATWSRVTPVNTISFNCTDHTANKFLERLAIQVHVHEFAHTLYACCLAQAFMHLLKIAFGKYCTIKFTY* # ORIGINAL: g11668.t1 original gene structure, not modified by PASA NODE_3470_length_3401_cov_50.0725 AUGUSTUS gene 1099 2974 . - . ID=g11668;Name=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS mRNA 1099 2974 . - . ID=g11668.t1;Parent=g11668;Name=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS exon 2907 2974 . - . ID=g11668.t1.exon1;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS CDS 2907 2974 . - 2 ID=cds.g11668.t1;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS exon 2560 2617 . - . ID=g11668.t1.exon2;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS CDS 2560 2617 . - 0 ID=cds.g11668.t1;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS exon 2197 2352 . - . ID=g11668.t1.exon3;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS CDS 2197 2352 . - 2 ID=cds.g11668.t1;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS exon 1533 1639 . - . ID=g11668.t1.exon4;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS CDS 1533 1639 . - 2 ID=cds.g11668.t1;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS exon 1099 1164 . - . ID=g11668.t1.exon5;Parent=g11668.t1 NODE_3470_length_3401_cov_50.0725 AUGUSTUS CDS 1099 1164 . - 0 ID=cds.g11668.t1;Parent=g11668.t1 #PROT g11668.t1 g11668 DPSLIFELLNEVGCGTYGAVHKARNKRTGQTVAAKLISLEDGEELREVHHEIAILKDCNHDNVVRYYESYLRGTKLWIIMEFCGGGSIEHVYKVLGEPLDEREIAAIMHEALQGLQYLESKSKIHRDIKGGNILLTDDGKVKLGELRIQL* # PASA_UPDATE: g12630.t1, single gene model update, valid-1, status:[pasa:asmbl_9732,status:3], valid-1 NODE_864_length_16571_cov_57.7305 . gene 5539 11142 . - . ID=g12630;Name=g12630.t1 NODE_864_length_16571_cov_57.7305 . mRNA 5539 11142 . - . ID=g12630.t1;Parent=g12630;Name=g12630.t1 NODE_864_length_16571_cov_57.7305 . five_prime_UTR 11093 11142 . - . ID=g12630.t1.utr5p1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . five_prime_UTR 10928 10929 . - . ID=g12630.t1.utr5p2;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 11093 11142 . - . ID=g12630.t1.exon1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 10813 10929 . - . ID=g12630.t1.exon2;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 10813 10927 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 10266 10482 . - . ID=g12630.t1.exon3;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 10266 10482 . - 2 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 9888 10010 . - . ID=g12630.t1.exon4;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 9888 10010 . - 1 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 9517 9676 . - . ID=g12630.t1.exon5;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 9517 9676 . - 1 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 9148 9261 . - . ID=g12630.t1.exon6;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 9148 9261 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 8729 8825 . - . ID=g12630.t1.exon7;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 8729 8825 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 8329 8408 . - . ID=g12630.t1.exon8;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 8329 8408 . - 2 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 7795 7935 . - . ID=g12630.t1.exon9;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 7795 7935 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 7460 7588 . - . ID=g12630.t1.exon10;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 7460 7588 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 6982 7139 . - . ID=g12630.t1.exon11;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 6982 7139 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 6661 6805 . - . ID=g12630.t1.exon12;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 6661 6805 . - 1 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 6254 6405 . - . ID=g12630.t1.exon13;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 6254 6405 . - 0 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . exon 5539 6109 . - . ID=g12630.t1.exon14;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . CDS 5755 6109 . - 1 ID=cds.g12630.t1;Parent=g12630.t1 NODE_864_length_16571_cov_57.7305 . three_prime_UTR 5539 5754 . - . ID=g12630.t1.utr3p1;Parent=g12630.t1 #PROT g12630.t1 g12630 MGTRKWFHPHLSGGDAEKLLKEVGFEGSFLVRPSNSKPGDFTLSVRRAHDCTHVKIQNSGDYYDLYGGEKFASLSELVQYYMENTDQLKEKNGQLITLKFPLLCDDPTTERWFHGGISGKEAERLLKENGLDGSFLVRASQSKPGDYSFSVRVSKDRISHVIIRNRNGKLDVGGKETFTSLADLVAYFRDNPMLDNGTSSFLELKHPLNTTRVNATSLKGRVAELEKETDAIYGKAGFWEEFEHLQQMESKNMFSRSEGLRVENKAKNRYKNIVPFDHTRVALKQLASSDVGADYINANFISGEVRGSNRAYIACQGPLPGTVEHFWQMIFEQNSRVIVMTTNETEKGKSKCAKYWPDVDETLQFGKFSITFRAESTFKQYVLRELLLEKEDDPASARLVWQFHYTSWPDHGVPEKPGEVLLYLHDVRECQAQAHPAGPIIVHCSAGIGRTGTFIAVDVLLNRIAEEGIDCDIDIQKTIHNIRTQRSGMVQTEAQYKFVYMAILHHIDILREKMLQEQLSSSTPSGVTSDAVYGNIPSASFPARQTAPKPNDGQLYENLPRSAAPQPEYGNLPAPRAAASGPTYGNLPMPSRVPAPAPQPVYGNLNTIASEGPTYGNIPARTQPPPPVGSRPSEPIYGNTNNANTGGDYDTLNSQLRQTRL* # ORIGINAL: g12629.t1 original gene structure, not modified by PASA NODE_864_length_16571_cov_57.7305 AUGUSTUS gene 3988 4525 . - . ID=g12629;Name=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS mRNA 3988 4525 . - . ID=g12629.t1;Parent=g12629;Name=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS exon 4489 4525 . - . ID=g12629.t1.exon1;Parent=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS CDS 4489 4525 . - 0 ID=cds.g12629.t1;Parent=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS exon 4228 4385 . - . ID=g12629.t1.exon2;Parent=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS CDS 4228 4385 . - 2 ID=cds.g12629.t1;Parent=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS exon 3988 4110 . - . ID=g12629.t1.exon3;Parent=g12629.t1 NODE_864_length_16571_cov_57.7305 AUGUSTUS CDS 3988 4110 . - 0 ID=cds.g12629.t1;Parent=g12629.t1 #PROT g12629.t1 g12629 MGRARKTSECTEGPVPANAGAVPKAAQAKRGPNAYQIYLKEETERMKKDNPGMLFPDIRKIVSEKWKGKKDQTSKAGTAGHAADGDGSDSHGEVSHSPSSDSGST* # PASA_UPDATE: g12628.t1, single gene model update, valid-1, status:[pasa:asmbl_9733,status:12], valid-1 NODE_864_length_16571_cov_57.7305 . gene 106 1955 . + . ID=g12628;Name=g12628.t1 NODE_864_length_16571_cov_57.7305 . mRNA 106 1955 . + . ID=g12628.t1;Parent=g12628;Name=g12628.t1 NODE_864_length_16571_cov_57.7305 . exon 106 284 . + . ID=g12628.t1.exon1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 106 284 . + 0 ID=cds.g12628.t1;Parent=g12628.t1;5_prime_partial=true NODE_864_length_16571_cov_57.7305 . exon 478 583 . + . ID=g12628.t1.exon2;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 478 583 . + 1 ID=cds.g12628.t1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . exon 779 907 . + . ID=g12628.t1.exon3;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 779 907 . + 0 ID=cds.g12628.t1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . exon 1163 1271 . + . ID=g12628.t1.exon4;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 1163 1271 . + 0 ID=cds.g12628.t1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . exon 1450 1535 . + . ID=g12628.t1.exon5;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 1450 1535 . + 2 ID=cds.g12628.t1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . exon 1853 1955 . + . ID=g12628.t1.exon6;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . CDS 1853 1879 . + 0 ID=cds.g12628.t1;Parent=g12628.t1 NODE_864_length_16571_cov_57.7305 . three_prime_UTR 1880 1955 . + . ID=g12628.t1.utr3p1;Parent=g12628.t1 #PROT g12628.t1 g12628 QQQPSATKAKDSPSAPSQRKDKDREPDSGKKRGRKPTVQIDDHLKSQMEKVYDAVRKLMRDGRRVCELFITLPSKRAYPDYYQLIKNPIDLRTIWERAETGVYKTLDAFMDDMRLLVSNAQTFNVEGSDVYEDSVLIWKTCEEVKERVLSETPAVAAPAVDSEGDDESEPLDVGAPARKLTVKLNVGKPSNGDKRKSELDDEEPPRKSGRR* # PASA_UPDATE: g12631.t1, single gene model update, valid-1, status:[pasa:asmbl_9735,status:12], valid-1 NODE_864_length_16571_cov_57.7305 . gene 13958 15710 . - . ID=g12631;Name=g12631.t1 NODE_864_length_16571_cov_57.7305 . mRNA 13958 15710 . - . ID=g12631.t1;Parent=g12631;Name=g12631.t1 NODE_864_length_16571_cov_57.7305 . exon 15564 15710 . - . ID=g12631.t1.exon1;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . CDS 15564 15710 . - 0 ID=cds.g12631.t1;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . exon 15138 15295 . - . ID=g12631.t1.exon2;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . CDS 15138 15295 . - 0 ID=cds.g12631.t1;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . exon 14741 14789 . - . ID=g12631.t1.exon3;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . CDS 14741 14789 . - 1 ID=cds.g12631.t1;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . exon 13958 14472 . - . ID=g12631.t1.exon4;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . CDS 14287 14472 . - 0 ID=cds.g12631.t1;Parent=g12631.t1 NODE_864_length_16571_cov_57.7305 . three_prime_UTR 13958 14286 . - . ID=g12631.t1.utr3p1;Parent=g12631.t1 #PROT g12631.t1 g12631 MSVLLTSGFTRTFACTLPAHYSRTKDNSLGDDWVYETVRTIRKVSKEEKTTLENIASPAVTSVGAVTAAPSLNDAKTEPVAAVQHPGLDRSISLESTTSVDSEGTTKLDASIESMLSRFESVSTNEYLRFAIASLRASFARAEALSPGITGEMAFHVAYHRGAMESPSTDTVRFTSAPK* # ORIGINAL: g1278.t1 original gene structure, not modified by PASA NODE_3914_length_2521_cov_42.4816 AUGUSTUS gene 45 502 . - . ID=g1278;Name=g1278.t1 NODE_3914_length_2521_cov_42.4816 AUGUSTUS mRNA 45 502 . - . ID=g1278.t1;Parent=g1278;Name=g1278.t1 NODE_3914_length_2521_cov_42.4816 AUGUSTUS exon 406 502 . - . ID=g1278.t1.exon1;Parent=g1278.t1 NODE_3914_length_2521_cov_42.4816 AUGUSTUS CDS 406 502 . - 0 ID=cds.g1278.t1;Parent=g1278.t1 NODE_3914_length_2521_cov_42.4816 AUGUSTUS exon 45 185 . - . ID=g1278.t1.exon2;Parent=g1278.t1 NODE_3914_length_2521_cov_42.4816 AUGUSTUS CDS 45 185 . - 2 ID=cds.g1278.t1;Parent=g1278.t1 #PROT g1278.t1 g1278 MAAAPDDTATEEYFKQLEGILENGCHEQKKATDCQQLGEFLQAVRKDLTGAAAAYTIGCDGMNMPQSCFSLGTLCIIGK # ORIGINAL: g6072.t1 original gene structure, not modified by PASA NODE_957_length_15449_cov_41.7297 AUGUSTUS gene 1445 4507 . - . ID=g6072;Name=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS mRNA 1445 4507 . - . ID=g6072.t1;Parent=g6072;Name=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 4214 4507 . - . ID=g6072.t1.exon1;Parent=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 4214 4507 . - 0 ID=cds.g6072.t1;Parent=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 2672 3994 . - . ID=g6072.t1.exon2;Parent=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 2672 3994 . - 0 ID=cds.g6072.t1;Parent=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 1445 2275 . - . ID=g6072.t1.exon3;Parent=g6072.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 1445 2275 . - 0 ID=cds.g6072.t1;Parent=g6072.t1 #PROT g6072.t1 g6072 MERARELILGRLKNGTLVSDLRHGRWRVVLCILVVCAGPAYFFSAFRAVNRSSGAWLFSVPNFGWGQTETHFANDHGNDGLHDPSLSRRLTLDGMVSLLEGRASSCDLTDPLRVKVKESYPTTAERTHCHGSATFDGERECTRPQNFGKLLVPGAKTFIFVDPYDYTFEIIPGAILSTEGAALREENAVARRSSSITIAVQASIDRVFMHLLKLAAVWQGPISIAIIINNAENDESAVRSLVQTSPMLQKWVDFHFVRRRQPASDIVQPTFYPINMLRNVATQLVLSEWVMVLDLDVLPNACMSAFMAQVKIAEAAYASAYTTGACPGLLAYVPPALELPENVSIPFEGLVGKTCTLLTKKSAVDKLHKGTVRPMHMYFNPAYMPTNHSRWMGSDEMFEVKYSARFEPYYIARSNIPLFNDSFVDRGGNFAQQVYHLFAAGYRFIILPEIFTIDIPHSVATRASAFVKSLSLWDDFVVYTSQLYGVSQSNGVAKGPAWNAVKARLALEVAKFPVAMYNAAVTKNVFASSAANNRTSRFKQDGAASQFVLVTSTSVNDKRPAETVKAILGRYCSLPSLWGFVVVWNTVGQSVPHDAEPGGARLGCGKPILYRPQGTNLATNRFQSANLPLDAPDAVFLMENDLAFTQEAVEFAFRVWRSHEDQIVGFIPRSVKQAKLPAVGGGDGVYEYGLLIEDNEYQLILLEASFIHKKHFATYWRSPAEAHSFVASHGNCDGIAMNFAVAAETGLPPVWVNVGTWQSRQKPSKTGSDVYFDQIDDSVKTVRSECVTRLARIYNGTPLVPSNLLVRPVSTPHGA* # ORIGINAL: g6073.t1 original gene structure, not modified by PASA NODE_957_length_15449_cov_41.7297 AUGUSTUS gene 9158 11482 . + . ID=g6073;Name=g6073.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS mRNA 9158 11482 . + . ID=g6073.t1;Parent=g6073;Name=g6073.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 9158 11482 . + . ID=g6073.t1.exon1;Parent=g6073.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 9158 11482 . + 0 ID=cds.g6073.t1;Parent=g6073.t1 #PROT g6073.t1 g6073 MAPSRVFLLVVLLCLSIAASGAYSRELCTDMRLPKQPTSIPRTCSVYANKTCCSLDDEYDIAVAINALGSAVAANQTCSEALKSLACAQCDPSSFEVFASLQGDDRNGLPLGPDRVAHTFRIPLICGSFCESIYAGCASVRFAWLPFATAAIATGRTLSVGATNVTLAEAFPSRDDFCGLFANASSGIGSSVQNRTTVAAQQPRYCYAGHPFTIPANLSTASVNVSNTMCVATVLPAMLTPEQAPSSLGYVTMATIRNDTANRVFLGDLAGVVRRFLVSGQNGSFIDDGAFLNITSRVWSSGERGFLGFAFHPNFTANGRFFVSYSCNPATDKINCAWPCTRGCEFGPCGADGFCTGIDHVSNVVEYKLNPDGSSRASVFDSAANKTVPLPFNETSEVRQIFSTPNPMSTQNGGQLLFGPDGMLYFMVGDGGGANDPMDLSQTPASAMGKILRFNVDIAAEVAGSACGAEQDDVPRLWSQQSASSLPEVHAEGLRNPWRCSFDRERGHYMFCGDVGEKAFEEVNLIVRGGNYGWRDFEGPNITVNGWRRIAAALRMLTGDNTIPIANDSSVTNSVGFPRDSRGVALLMELIARSASSRYPTSLVFPVSGFRYRTMASITGGYVVRSEAAGCLRGRYAFADILGRFYAADELPRDSGVFVTSQFDTWLCNATMSAYGCPAGIGLITSFGEDNAGEVYALSSTGVHRLIDPTLCGLSCNRTVYAPGMAPSVVGMSATPTPTQTYDAQGSNSAGVAGKNEVALVVLAVCVIVLTMYW* # PASA_UPDATE: g6074.t1, single gene model update, valid-1, status:[pasa:asmbl_10118,status:12],[pasa:asmbl_10120,status:12], valid-1 NODE_957_length_15449_cov_41.7297 . gene 11645 14722 . - . ID=g6074;Name=g6074.t1 NODE_957_length_15449_cov_41.7297 . mRNA 11645 14722 . - . ID=g6074.t1;Parent=g6074;Name=g6074.t1 NODE_957_length_15449_cov_41.7297 . five_prime_UTR 14680 14722 . - . ID=g6074.t1.utr5p1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 14576 14722 . - . ID=g6074.t1.exon1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 14576 14679 . - 0 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 14344 14455 . - . ID=g6074.t1.exon2;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 14344 14455 . - 1 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 14118 14191 . - . ID=g6074.t1.exon3;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 14118 14191 . - 0 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 13646 13729 . - . ID=g6074.t1.exon4;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 13646 13729 . - 1 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 13279 13393 . - . ID=g6074.t1.exon5;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 13279 13393 . - 1 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 12890 12969 . - . ID=g6074.t1.exon6;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 12890 12969 . - 0 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 12610 12678 . - . ID=g6074.t1.exon7;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 12610 12678 . - 1 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 12253 12308 . - . ID=g6074.t1.exon8;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 12253 12308 . - 1 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . exon 11645 12060 . - . ID=g6074.t1.exon9;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . CDS 11807 12060 . - 2 ID=cds.g6074.t1;Parent=g6074.t1 NODE_957_length_15449_cov_41.7297 . three_prime_UTR 11645 11806 . - . ID=g6074.t1.utr3p1;Parent=g6074.t1 #PROT g6074.t1 g6074 MGKQRQYRKRRDEDDASEELQKTEDANGDPSEEIRAKLEETRELQRMRERAKGVSAVGLAVGEKVSKAAELAADDPFKTNTGGLVEISSVKDRNRDRADEDVDVKLLLGATFAAETKQRDEDKNMLKYIEEEMAKRKGVQNVDAESKTRSADDMLYEIPEHLQVKSAIKSEEMLSSQMLSGIPEIDLGFEEKVKNIEDTERAKQRLAESMGRRHVAPHPSDDGSGHRHHQRYSHVHHVHSDSAARARDGDRGRGGHRGGHQPGGHQQQGGRGGHQQGGRGGYQQGGRGGFGQKRQSDMASDDIAFDRFKKRMRKF* # ORIGINAL: g6071.t1 original gene structure, not modified by PASA NODE_957_length_15449_cov_41.7297 AUGUSTUS gene 205 1156 . + . ID=g6071;Name=g6071.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS mRNA 205 1156 . + . ID=g6071.t1;Parent=g6071;Name=g6071.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 205 584 . + . ID=g6071.t1.exon1;Parent=g6071.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 205 584 . + 2 ID=cds.g6071.t1;Parent=g6071.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS exon 863 1156 . + . ID=g6071.t1.exon2;Parent=g6071.t1 NODE_957_length_15449_cov_41.7297 AUGUSTUS CDS 863 1156 . + 0 ID=cds.g6071.t1;Parent=g6071.t1 #PROT g6071.t1 g6071 ASVIVTARRSKEGSEVAEEIRSQGGKAEFVNCDVAVASSVTSLFEHIRRAHGRIDIAINNAAFDGPDADFVDITEDHFDRVFDVTVKGTFLCMQEEIRMMRQQATRGAIVNMASRYGVVARAGLTPYVAAKHAVVGLSRVAAAEYAKHNVRINALCSGAIEGGMILKDFKLDPTMRDRISAAIPAKRLGSVEEIIGTTMYMCSDAAGFMHGHALVMDGGYTVV* # ORIGINAL: g10416.t1 original gene structure, not modified by PASA NODE_632_length_19937_cov_40.5693 AUGUSTUS gene 4808 6836 . + . ID=g10416;Name=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS mRNA 4808 6836 . + . ID=g10416.t1;Parent=g10416;Name=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 4808 4912 . + . ID=g10416.t1.exon1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 4808 4912 . + 0 ID=cds.g10416.t1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 5153 5256 . + . ID=g10416.t1.exon2;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 5153 5256 . + 0 ID=cds.g10416.t1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 5561 5714 . + . ID=g10416.t1.exon3;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 5561 5714 . + 1 ID=cds.g10416.t1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 5977 6105 . + . ID=g10416.t1.exon4;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 5977 6105 . + 0 ID=cds.g10416.t1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 6334 6411 . + . ID=g10416.t1.exon5;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 6334 6411 . + 0 ID=cds.g10416.t1;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 6708 6836 . + . ID=g10416.t1.exon6;Parent=g10416.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 6708 6836 . + 0 ID=cds.g10416.t1;Parent=g10416.t1 #PROT g10416.t1 g10416 MALLDVTEAERVTELLEAQVSQMRVDYGSKALLESDVHADPIVQFGVWLDEAVRCKVYEPNAMSLATSTPDGYPSARMVLLKGFGPQGFTFFTNYESRKGGELAQNPRAALVFWWGPLFRSVRIEGDVTRVSGDESSEYFHTRPRGSQFGAVASHQSTVVESRKVLETRMKELEEAFPDGTVIPRPDFWGGYLVAPRSIEFWQGRRSRVHDRIKYVRNADAAGGWTIERLSP* # ORIGINAL: g10415.t1 original gene structure, not modified by PASA NODE_632_length_19937_cov_40.5693 AUGUSTUS gene 156 4149 . + . ID=g10415;Name=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS mRNA 156 4149 . + . ID=g10415.t1;Parent=g10415;Name=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 156 261 . + . ID=g10415.t1.exon1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 156 261 . + 1 ID=cds.g10415.t1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 527 759 . + . ID=g10415.t1.exon2;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 527 759 . + 0 ID=cds.g10415.t1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 1196 1477 . + . ID=g10415.t1.exon3;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 1196 1477 . + 1 ID=cds.g10415.t1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 1825 2978 . + . ID=g10415.t1.exon4;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 1825 2978 . + 1 ID=cds.g10415.t1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 3217 3415 . + . ID=g10415.t1.exon5;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 3217 3415 . + 2 ID=cds.g10415.t1;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 3708 4149 . + . ID=g10415.t1.exon6;Parent=g10415.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 3708 4149 . + 1 ID=cds.g10415.t1;Parent=g10415.t1 #PROT g10415.t1 g10415 VVSETLRLFSPLSVTVRTPAHDDILAGYKVTPKMLISVSMSGSHVNPSQWGPNAHEFNPDNFLPENVSKRHRYAFIPFSIGHRSCVGAQMARLETKVVMATLLQQLRFRIHPDSNLEPMETLGFRPISPLVVPYVRRKSVFPGGIAPESSANVPLHEPVMRRISRVDASAVKKTAPALILYGSASGTGEDLASRLYTQGRANSFETSVDELDCYVDRLSSVNTLVVVCSTYNGYPPDNAARFLAWIKDPKHPPGMLSHLKYAVFGCGNVLWRTTFQKVPAAIDRRLFELGATRMLVAGTGDASSGGIEPAFLAWSAQLWTILRAAYNLNLDMEQDRFARHGTFSSSRKTQTQTHATKTDQPPTAASTSSAAADRRAFTRRTSSFMIKESDEAPTTLIDGAKLNLGRKTKLMRVVETAELNGPDGGKSTRLVRLEIPDGKTYNVGDHLCVHPHTSREIALALLAHLKIDRDEKLQFVDRSTKGEMSPIDMLCRFADLRQRPARETLRALASFVSDGAEADALLEVSGDELTSTSAYDARFGTTWPPKETLADVICSLKSVSMPFRELVCALPKIVPRNYSIASAPCERNVVNGKSTLTLCVGVVQEEAAGGRTYEGFCSGQLSRAVAGDVVECNIMASQGFTIPAEGSDVKELIFVSAGTGIAPFVGFLEELDRRRIAGIPFPPTRVYFGCRAPTHDFIHAETLQHHERTGVISSLRVAFSRAEPQHPRHYVQDLIAEDGDAIYSALSTGKGLFMVCGSAKRMGADVWATLNNIMAAKGGMSKEGAKEALDALVAGGRYLEDVWG* # ORIGINAL: g10418.t1 original gene structure, not modified by PASA NODE_632_length_19937_cov_40.5693 AUGUSTUS gene 11226 16332 . - . ID=g10418;Name=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS mRNA 11226 16332 . - . ID=g10418.t1;Parent=g10418;Name=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 16306 16332 . - . ID=g10418.t1.exon1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 16306 16332 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 15987 16153 . - . ID=g10418.t1.exon2;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 15987 16153 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 15592 15645 . - . ID=g10418.t1.exon3;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 15592 15645 . - 1 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 15197 15287 . - . ID=g10418.t1.exon4;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 15197 15287 . - 1 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 14884 14946 . - . ID=g10418.t1.exon5;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 14884 14946 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 14516 14626 . - . ID=g10418.t1.exon6;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 14516 14626 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 14208 14253 . - . ID=g10418.t1.exon7;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 14208 14253 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 13849 14027 . - . ID=g10418.t1.exon8;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 13849 14027 . - 2 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 13411 13530 . - . ID=g10418.t1.exon9;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 13411 13530 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 13032 13097 . - . ID=g10418.t1.exon10;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 13032 13097 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 12633 12764 . - . ID=g10418.t1.exon11;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 12633 12764 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 11975 12167 . - . ID=g10418.t1.exon12;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 11975 12167 . - 0 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 11578 11757 . - . ID=g10418.t1.exon13;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 11578 11757 . - 2 ID=cds.g10418.t1;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 11226 11398 . - . ID=g10418.t1.exon14;Parent=g10418.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 11226 11398 . - 2 ID=cds.g10418.t1;Parent=g10418.t1 #PROT g10418.t1 g10418 MLGFDANFWEQEGFEVLKKHMQQGNEYCDEIASILAERAEASKEYSRQLVRVAERASKAAKDTLGTLKVAWDEFRSEIEAEARWHQNVSGQVKDELVNPLYTFAKEQKKNRKPIADKVDKSLAKLNDARSSCLKAKRTAFQKTKDMEAEYVTYDEAKAGKKRPYTEKELQSLDKSARKAEETQYKSDKEYRASLKELELARRRWDETMIQGCQELQHMEEERINYLKTQLSRYVALKESLSVENTANCDRFKHTVESINDAEDIATATKTKGTGPNHPLEVLYDCYEEDTNNQIRKERRERRIGEKVQDYISELQREKKTFQGVVGLSTVYQNQTNFSDDKGRAEVARQMSEAQRTITGLQACVYKLECSHAEVSGNPAQNHRLAEYIHKRRDLKENMLETTLELNVPFDEYDDDLATFDAGSNAGYVPGNYSGGTLRVSNNTSSRPRAFSATSSSSQASQAETAPPLAQHYEEFASATYCYAIYDYVANNGDELSINVGDAIEFNEDLGDGWSRGTCNGASGLFPSNYVEFR* # PASA_UPDATE: g10417.t1, single gene model update, valid-1, status:[pasa:asmbl_8591,status:12],[pasa:asmbl_8592,status:12], valid-1 NODE_632_length_19937_cov_40.5693 . gene 7334 9884 . - . ID=g10417;Name=g10417.t1 NODE_632_length_19937_cov_40.5693 . mRNA 7334 9884 . - . ID=g10417.t1;Parent=g10417;Name=g10417.t1 NODE_632_length_19937_cov_40.5693 . five_prime_UTR 9592 9884 . - . ID=g10417.t1.utr5p1;Parent=g10417.t1 NODE_632_length_19937_cov_40.5693 . exon 8884 9884 . - . ID=g10417.t1.exon1;Parent=g10417.t1 NODE_632_length_19937_cov_40.5693 . CDS 8884 9591 . - 0 ID=cds.g10417.t1;Parent=g10417.t1 NODE_632_length_19937_cov_40.5693 . exon 7334 8549 . - . ID=g10417.t1.exon2;Parent=g10417.t1 NODE_632_length_19937_cov_40.5693 . CDS 7902 8549 . - 0 ID=cds.g10417.t1;Parent=g10417.t1 NODE_632_length_19937_cov_40.5693 . three_prime_UTR 7334 7901 . - . ID=g10417.t1.utr3p1;Parent=g10417.t1 #PROT g10417.t1 g10417 MQTMDGTDTNADSFLFFVSAMTGAATSSSLLGLPTMQQQQQQQQQQLSDSDVVAQQQLHQDAAFLHSLQMKRLEGQQPGYQYPISPISTPATPSPVLPSLVPLAHTNTATTLRGSSSPSSDSAHATKGLTWNSYGKKTGTKGTAHTTAAEKKAASKARASMASSASAVMATAAVPRGVVVPAVTPSRRRSAVEPKQAASLSALMVRAIESSPYRHCTPTQIYEWIRASNPDMKNCTTSSISVQLSHNKAFQRVTDCNIPGNEPLYTLRKARSPRGSPAKPPPIVVPGGSGNSSLNSSFNGSVTCLNGNNPFATPVSMRSLAAHMQNIAASSTSPLTPCSALSAQLSVQSLGYTPNTASPTQQHTSVDGTPSFYIPLASPMSASPDDRPKRLKLSPSPSALSTPRGMASLRMSPTMDGGSQSAGASSDDDALPSDFSFLTTAFIPPLLSLAL* # ORIGINAL: g10419.t1 original gene structure, not modified by PASA NODE_632_length_19937_cov_40.5693 AUGUSTUS gene 18048 19571 . + . ID=g10419;Name=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS mRNA 18048 19571 . + . ID=g10419.t1;Parent=g10419;Name=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 18048 18193 . + . ID=g10419.t1.exon1;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 18048 18193 . + 0 ID=cds.g10419.t1;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 18284 18645 . + . ID=g10419.t1.exon2;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 18284 18645 . + 1 ID=cds.g10419.t1;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 18970 19061 . + . ID=g10419.t1.exon3;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 18970 19061 . + 2 ID=cds.g10419.t1;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS exon 19392 19571 . + . ID=g10419.t1.exon4;Parent=g10419.t1 NODE_632_length_19937_cov_40.5693 AUGUSTUS CDS 19392 19571 . + 0 ID=cds.g10419.t1;Parent=g10419.t1 #PROT g10419.t1 g10419 MLEKLPALSASTFFPQVANESRKDESSDPYEHMLDSLMHRRTELKKMKWLPDLPGNRGKHGRHVLQAEPTDAHDSSETRANNPNHATSTVTALPSIKTANGKNDATSTHLPGSYVRGRKPLTATDPVIAPHAPASSGEEADKKKKSKRRLGFTDEIREKYLANLPPHFSGLNRHRLGPHDLNKFPREEIEDSNFRMKHVKYNPKLSFVKTASHKKDSESDPLEDEDAELDWFHAPNTQQAMLAMRRGEVLLGVTHWVIG* # ORIGINAL: g6938.t1 original gene structure, not modified by PASA NODE_2196_length_7315_cov_65.9977 AUGUSTUS gene 254 1187 . + . ID=g6938;Name=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS mRNA 254 1187 . + . ID=g6938.t1;Parent=g6938;Name=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 254 415 . + . ID=g6938.t1.exon1;Parent=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 254 415 . + 0 ID=cds.g6938.t1;Parent=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 610 753 . + . ID=g6938.t1.exon2;Parent=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 610 753 . + 0 ID=cds.g6938.t1;Parent=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 933 1187 . + . ID=g6938.t1.exon3;Parent=g6938.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 933 1187 . + 0 ID=cds.g6938.t1;Parent=g6938.t1 #PROT g6938.t1 g6938 MLTAQNKPARAKALAIASAINKKKNLGTAVPTPAGAGVDASQVAQQVLKGEAIEGGATASIEDAAGTEEARDRSEPELQQHFEEELEINEFPQKARWRVTHKDSVREIQEYSSAALTVRGSYFPPGKQPKEGERKLYLFLEGPTERAIQLAKLEIKRILKEELVKEAANAASGGGGQRQPGRYTVV* # ORIGINAL: g6940.t1 original gene structure, not modified by PASA NODE_2196_length_7315_cov_65.9977 AUGUSTUS gene 3746 4862 . + . ID=g6940;Name=g6940.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS mRNA 3746 4862 . + . ID=g6940.t1;Parent=g6940;Name=g6940.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 3746 3922 . + . ID=g6940.t1.exon1;Parent=g6940.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 3746 3922 . + 0 ID=cds.g6940.t1;Parent=g6940.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 4173 4862 . + . ID=g6940.t1.exon2;Parent=g6940.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 4173 4862 . + 0 ID=cds.g6940.t1;Parent=g6940.t1 #PROT g6940.t1 g6940 MVYFVCDACQETVKKPKVESHCLKCRNCWILSCVDCGVEFQGEAYAAHNSCISEAEKYQGALYKGKPTKQNKAEQKQQAWLDAVRNALSSVADPKLQSLFSRLADYDNIPRKKAKFVNFVKNSLNLRDGAVADQMWEVFSKATSKEQEAQKADKKGKAPVASAAASADGADDSGDASSVKEEKADVATDAKDKKDKKKDKKDKKRKERDEEESPAATSEKKSAKVAKTDEPSKKRKAEEEASADDKTPKKQKKEKKENKEKEEKEEKKKDKKEKKEKKEKKEKKDKSK* # PASA_UPDATE: g6941.t1, single gene model update, valid-1, status:[pasa:asmbl_3729,status:12], valid-1 NODE_2196_length_7315_cov_65.9977 . gene 5421 6944 . - . ID=g6941;Name=g6941.t1 NODE_2196_length_7315_cov_65.9977 . mRNA 5421 6944 . - . ID=g6941.t1;Parent=g6941;Name=g6941.t1 NODE_2196_length_7315_cov_65.9977 . five_prime_UTR 6917 6944 . - . ID=g6941.t1.utr5p1;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . exon 6122 6944 . - . ID=g6941.t1.exon1;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . CDS 6122 6916 . - 0 ID=cds.g6941.t1;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . exon 5882 5959 . - . ID=g6941.t1.exon2;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . CDS 5882 5959 . - 0 ID=cds.g6941.t1;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . exon 5421 5630 . - . ID=g6941.t1.exon3;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . CDS 5472 5630 . - 0 ID=cds.g6941.t1;Parent=g6941.t1 NODE_2196_length_7315_cov_65.9977 . three_prime_UTR 5421 5471 . - . ID=g6941.t1.utr3p1;Parent=g6941.t1 #PROT g6941.t1 g6941 MADSASGGESEAAAAARKRRELRRQRILNQGESRLAHITSGGTVPLLEEQPSPSPAATIAPAVGSARVSSVPAAQKDDTLTAGSDNATVGTDARQLAPLPGEVEVAGVSQRADDTTPVTKEASAKKGDNEDEHLPLPPSMRRRVADKEPGAPSLATASTNPHPPSAPLLAPMVASQIRAQGQRSGSLGVPAASASTSAAGSVRRLFALTERRFELLCLAALALLLASATVASHLRNGRDAAELTDMFKPNLTEETTEPLVLLGGQSVAWIFITFEVTMRMRGRIANSLRGRTPAAAMPSSTLVAAMDAFQAMRTVFDDVVIFLFTFVISLALLSHLAVSRAAA* # ORIGINAL: g6939.t1 original gene structure, not modified by PASA NODE_2196_length_7315_cov_65.9977 AUGUSTUS gene 1580 3269 . - . ID=g6939;Name=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS mRNA 1580 3269 . - . ID=g6939.t1;Parent=g6939;Name=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 3153 3269 . - . ID=g6939.t1.exon1;Parent=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 3153 3269 . - 0 ID=cds.g6939.t1;Parent=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 2816 2971 . - . ID=g6939.t1.exon2;Parent=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 2816 2971 . - 0 ID=cds.g6939.t1;Parent=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS exon 1580 2524 . - . ID=g6939.t1.exon3;Parent=g6939.t1 NODE_2196_length_7315_cov_65.9977 AUGUSTUS CDS 1580 2524 . - 0 ID=cds.g6939.t1;Parent=g6939.t1 #PROT g6939.t1 g6939 MAIFTFKRFLAGAAGVGAYFAYGKYEERAQRRLLWKQAVVLGDVLSPIDAKPRRLTVILNPVAGKRNAQYIFDRDVAPILNLAAIDYGIVETERIGHARDMATLLDVNMTDGVVLVGGDGIAHEFFAGLLSRDDAASVASTLPVGVIPTGTCNAFYAHAFGESTSAGQTALAIARAQTRQEDVLEISTDDGRRDFAVNLIAFGALGGPAAATRGWFPRFRYEKAALRAMFTNAFETVDVSLQTDSALGGSSAERSGKYAGVAVLKGHRISPTRSLASAEDNSPLRVALFPQQSSFAYVAALFSLPKHIGKDGAGHSPDSRDVEIIPGDVVKISVVDRRSDPHAKAPKDAKKPPPSENAAEESEKAPVVYPPKLANLDGERADNVAMTVRVRPNAIRLFSPEKEAS* # ORIGINAL: g14409.t1 original gene structure, not modified by PASA NODE_1219_length_12925_cov_41.6225 AUGUSTUS gene 881 5394 . + . ID=g14409;Name=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS mRNA 881 5394 . + . ID=g14409.t1;Parent=g14409;Name=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS exon 881 922 . + . ID=g14409.t1.exon1;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS CDS 881 922 . + 0 ID=cds.g14409.t1;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS exon 1000 1230 . + . ID=g14409.t1.exon2;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS CDS 1000 1230 . + 0 ID=cds.g14409.t1;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS exon 1616 1652 . + . ID=g14409.t1.exon3;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS CDS 1616 1652 . + 0 ID=cds.g14409.t1;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS exon 2345 5394 . + . ID=g14409.t1.exon4;Parent=g14409.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS CDS 2345 5394 . + 2 ID=cds.g14409.t1;Parent=g14409.t1 #PROT g14409.t1 g14409 MDTAVELVEGRRRRGSVADAIGGSVQDIHGTASGDKAPVAPDNAAAVPRGGSAAAIDSTVTVVVRHTAEYVTKVNISRHLEWAKQYRIFIELMLPVVTAMITMVDPKILSHSIAVVVFAALVIYANRTIGDELDVEDCKKKYFCRSNCVHSVSRYSWPVKQCVQISVGFYALILMVYTIVTVAQGEAFNLLTHTSTVTNVNQAAADDLLSQLYTKNLVVLGAAFTLHVLCSWLQYMATSASFLSCDFVWSSKPEVAVQKLSKPKVIFWAMMSFIFQAPYEFPLLRKWITSVHYALDLLTRINKENKMPPKPKEKKLNRDMEDSGSEDVTYRCPGIRRFLDSEYLRRRMRSFLYGELLCMIPDDSEFGEQARAELGGECVKNIYEKLARTLVKVTKVSSAPFRLFSTSIEAYNVNVAPFREEIASEYDKPPRCGECRPLSAPPTADNKSKRNSNIATTEIKADFSSDGKIAAAGNKSAPTTRGDGKSDADDMVNKVVKAMETFIAAFDCLLRTYGQETQITDVDSLTNKSHGSAGGDDGGEDPAGFSFGERSDTSDDDDRSDFGYEEVEQMSMSRRKFRIFDKMLRDKKSGYNFFRRWFAHQLRCIRDPCKEEKDADEPKSIFNAVYHLHGLLSAAHEATKTMDDLKEALDQIEAAYEEGDMFAVYTFNREYLGAYFSDTDPKEIIEVCKSAMKRICEKSDALDNAVSAVEETLKTALGSTEEDAAVLIAEIEHPENTRVTFQKQKNNKKGGSRAGKAGNSAAEPKNRRDLVKYPTVALRNFSASAGGKNLLTDADDQSVEVPVLAFAVRVPFSCPPLMTFIAWMKRVTLEDKFWKTMGKIYGRLEGDENKDWDRCLKLLELLGELKDRLQRMQEAEEEEKAETGEDGPDDDGAEVWEALMESFNELEFKVFRRKLFMELHESVVQVRGRERGEGALQLSVDSDNPIDEETTTRSHASDDDVDDSTDGKARDMAKFAGTSPDKEADDSTYDSDDSDGSSEAPAVPVPRHLYEPVASYGSDDPDFGQLLGDYEEHDVPFEGELPSGIKYTVTAETAGALIAELKEKRKKLQKRASSALTETWTRFVDEIVDPNLEAFIPFTFEFDQVWKEKKAPGDKVKAS* # ORIGINAL: g14408.t1 original gene structure, not modified by PASA NODE_1219_length_12925_cov_41.6225 AUGUSTUS gene 380 853 . + . ID=g14408;Name=g14408.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS mRNA 380 853 . + . ID=g14408.t1;Parent=g14408;Name=g14408.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS exon 380 853 . + . ID=g14408.t1.exon1;Parent=g14408.t1 NODE_1219_length_12925_cov_41.6225 AUGUSTUS CDS 380 853 . + 0 ID=cds.g14408.t1;Parent=g14408.t1 #PROT g14408.t1 g14408 WHIHDDDDSSEDGYPADGLYSSASASRLISTQRNAGALPQVHVSVNVDADSPHGGGIEKSNRLRGFASPASGSATSGRASSRKTLSASQAAAAPGDLYGEPASVDWTRDSSSPIKFSDASSYAMPSRGQKVPIPRHVGLNVLDGDTDASATEERAPL* # PASA_UPDATE: g14410.t1, single gene model update, valid-1, status:[pasa:asmbl_843,status:12], valid-1 NODE_1219_length_12925_cov_41.6225 . gene 6467 12680 . - . ID=g14410;Name=g14410.t1 NODE_1219_length_12925_cov_41.6225 . mRNA 6467 12680 . - . ID=g14410.t1;Parent=g14410;Name=g14410.t1 NODE_1219_length_12925_cov_41.6225 . five_prime_UTR 12625 12680 . - . ID=g14410.t1.utr5p1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . five_prime_UTR 12338 12409 . - . ID=g14410.t1.utr5p2;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . five_prime_UTR 11731 11794 . - . ID=g14410.t1.utr5p3;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 12625 12680 . - . ID=g14410.t1.exon1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 12338 12409 . - . ID=g14410.t1.exon2;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 11723 11794 . - . ID=g14410.t1.exon3;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 11723 11730 . - 0 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 11258 11338 . - . ID=g14410.t1.exon4;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 11258 11338 . - 1 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 9384 10859 . - . ID=g14410.t1.exon5;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 9384 10859 . - 1 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 9009 9076 . - . ID=g14410.t1.exon6;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 9009 9076 . - 1 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 8513 8585 . - . ID=g14410.t1.exon7;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 8513 8585 . - 2 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 8229 8282 . - . ID=g14410.t1.exon8;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 8229 8282 . - 1 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 7811 7905 . - . ID=g14410.t1.exon9;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 7811 7905 . - 1 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 7442 7530 . - . ID=g14410.t1.exon10;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 7442 7530 . - 2 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . exon 6467 7219 . - . ID=g14410.t1.exon11;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . CDS 6752 7219 . - 0 ID=cds.g14410.t1;Parent=g14410.t1 NODE_1219_length_12925_cov_41.6225 . three_prime_UTR 6467 6751 . - . ID=g14410.t1.utr3p1;Parent=g14410.t1 #PROT g14410.t1 g14410 MNIDLRNNDLERLPDSVFDSAITGKDSIQRCVDSSDDTAVNICLENNPGGNGDYCSVADNHCIKPTCDACFCSPGWTGATCNSTCSSGTYGYLCSKTCNCTGISMCDPVTGECRALYTSVNRTTTEIWPEEIHISFDLQCGGKPPGACTYKLFRYIEDGSNNRRRRALTNETFVAVLTRDRPSVIDAPLIQKTNYTYAIVTNDTGVPVSYFNSFVTPAVTVPAAPTNLRALTGLDTFHLGVAWNAVPNKWGKILFYTVYKNSKMAAVLDDETSTRTYMDTVAVLSTIAYQVSANTSAGEGPLTSPLSLTVSAAVPQTSGGGGGNVGGTVAGAVVGVLGFVVGAVLFAVYMRRRRQDNTLRKEQNEMIVLMENAMHNPKLADIEVDPTHLTLLERIGEGEFGSVHKGSLQSDEIGGATTPVAVKTLKLDKALSPEDTQAISSAFFGEIELMNSVPKHQNVVSLLGVVTKVEPRRIVLEFAEFGDLKSYVHKWGETMPPAQLVNMGADVARGMAHLSSMGIVHRDLAARNCLVSRKGASGLIVKVGDFGLSRHMEGSDYYRVRSNTKLPIKWMAPESISHRTFTSATDCWSFGVTLWEVFSQGAKPYSSMNNQDISKYLKAGNRLSVPDNCPAQVYDLMMMCWRKMPETRPSFTVLCERLEAISATFGSTFDKTNDNSPASLAKKSIRYQTVKGQKYAVGGGGVQSGAASQAVTAYADVPRPVSVSVPTPTVTVNDVSGLATHGALTPNAVQGRPISGYVVLASDTAPAPVRPVSYRELEAAEPYHELERTEEIDLMMEPGEGNV* # ORIGINAL: g276.t1 original gene structure, not modified by PASA NODE_1858_length_8871_cov_50.6106 AUGUSTUS gene 137 8616 . - . ID=g276;Name=g276.t1 NODE_1858_length_8871_cov_50.6106 AUGUSTUS mRNA 137 8616 . - . ID=g276.t1;Parent=g276;Name=g276.t1 NODE_1858_length_8871_cov_50.6106 AUGUSTUS exon 5970 8616 . - . ID=g276.t1.exon1;Parent=g276.t1 NODE_1858_length_8871_cov_50.6106 AUGUSTUS CDS 5970 8616 . - 0 ID=cds.g276.t1;Parent=g276.t1 NODE_1858_length_8871_cov_50.6106 AUGUSTUS exon 137 5838 . - . ID=g276.t1.exon2;Parent=g276.t1 NODE_1858_length_8871_cov_50.6106 AUGUSTUS CDS 137 5838 . - 2 ID=cds.g276.t1;Parent=g276.t1 #PROT g276.t1 g276 MRKVPQKDFSRRLAFVFRSLEEHPSDEFADGVGCLLFETVKGVQQQFHSRVDEFIPCFFGAIVPPEDVKGGTLLSHGIGTDGRLAAHAAVASCMRKMAEHTRREHCGQVYTLLLSQLSLFLKHWNAAAEEEGERDSSGSRAAVDNMDIRNISELSYHWGIALGRVASILCSWVEHRGGSRVCGIDALFSSLPPLLLTLGPSATTPRVAGVKLAPSLPAEAAESCVRLAAATFVVAGPDVSMSRGPPVVAAVVDRASLGLLRTLCARLLDSGLAKTVFPQLCLSHVVGCLDRHAHHEPLQTIAFLKQLLESVDLAGIASAIVTKRRLIRFPASATATDSKRAEAPSSADGKKKTSKKKGRQGGDDDDAAVATKEHLDVAAANAEGRPRHGVVDLLVATCASFDPHLTRDEQAQLEEIPLLVASLSCLRSAEVAYDATFAVVQSLVTRLFNAAEQERSTDPASTPPSDTHHETFANWSRVVAPSATVRRLLLAAGAALETLVCLMRSYLADNSDTIATHAQFFREALSRFHGDRHVVAAVDSYYSLLHKVCGSDVFPVSSLVGVMADLRDNLTSPSRELRLSTLRILARHQQYDTLLVADDDKSATAEPCPCFDVCLAAEMCEPTLDEYRQRLVHLRRLEQLLTVGRLAEFYLEVPTRFLLSQLYVNFRHLWAPVTEMIGKIATANQAVFWSVLLPTLREAYERARVVSGPRVSTDPQFNVDDVVASAALGDNASDFRVANTAAARDLVARFNAIAEEGIDGRADHGNFHALLLETLHSSASSIAERHSRDLVPLFLDFIDAEFNVLFEGSDLTQDLARPPIIVDPEEGDGGDDDGVGHGNGGEDEDKGDGETAPEADGDDDMKESDAENADDGGEKEEKMDIDGEDQSDDDETAAAATAAARKRHARTRSILKGKRDRSDVGTMRKAAMRKLSQFLTLFGKFANPKALFKSERLHSLYLDFLLRSDPVVQQLALACVFTYKHPHIMPYKEQLEKLTSESAFRDGLAAFDVEEESGTVAADHRPTLMPLVMRILYARMTRRKKGGKNSLSARRATVFAFLTGCSEPEIGYFVLSILLGPFGAFLPSAAEISETLHFTEETSITAAVPLRKQMGFLNAVGDVVSKMRTKVAPFLPTLLCVTLRLTRDACILLHADMKGSVAAAFSNTLREIRLVGTQRISEIFDTFPTANYAPYVPALFSTIITPRLPRLRDESLQRPSGILELFEVWSRHSSLSRLLVRDPTALPSAFSCLAAPTVSEQVVSHVLGIAENVLALEETGGEMLANEVTRPNIGHLLESLHVMILMVASPQQPRDETTGAVGAKHGKASASASASASSRAKLVLSGKFTRRALSVLSRISGFATDAAKAGALASILLPFLKKGSGRQSGALPAAARADILTIVRNAYKLARPAQSHLSFLSGLFSSLSHRHARTELCGVYEAVAQWEPWLSPVVPILKGLNAYNPKSIEDPDYDTRLGAFADFNEKAYNELEARQLLPILQNLVYFAATSEDFSIRDNAVFGLLKLVSRIASSARAVGFVGSVSPVESMDPTGGLYCLLAHVIAPSVKRAMRGGREGARNEFLSVLSLIVKEFPDDPNFGDMRHLDAETTGDEDSSFFLNIKHIQTHRRVRALRRLAECCREGKLGQRSLTNYLLPLVSHLLTETSRASEHNIAREAIDAIGASCGRLGWGQYYAQLSRFLRILSEKPGAIEKTVMRAVVSILDNFHFDLSTADGHVAAAEVLRQQAEEKALAELRMKEKSDAYARKVDKRSRPRDAQEPGAQKKKAVAFDENGEDAAEAVDKEDKDAIMAADGEEGEEGEGDAMEVDAAAGDADAGQGKDAAAASSASSASSATRILTILVNKILPDLHRYLTTKDGDSDVLRVPIALAMTKLLMKVPEDTTATLLPGLLTRVCHVLRNREQNVRDSARETLVKIASTLGTRFLPFILQELKAALDKGYQRHVLGYTVHALLDDYVTSGDAPLDQRVGKIDHCIPKVLELLEADLFGTLAEEKEVAEITSKSKEAKAKKGFDSFELIARVASFACVPSLLDPIRARLAETDSHKEVRRCEEILRRIALGVRANPSSTPHALLVFVHSLVAADNAVRREAEKARKLTEKEKLEERLSHHRVPLASDNDNLLLARNPGRVKNPTAFAATNAYLLGEFALSLLHTALKHGTIDGRTIETLQMLDPFIMLLRDTLHSRQTRTIVLSLKCLGFLARMPLPSLEAAAPHLSERAFKLINKAGVGSNGTDLVQGCFRLMAVILRDVRTHIITDNQLRLLISRTAEDLEDAERQAVTFSLLKAIVSRKLIVPELYDIMDRVAELMVRSPSGPVRDLCGQVVLQFVLDYPLGNKRLRAHLEFLVKNIGYEYESGRLSTLQMLEAVIRKFPDEIVRENAEFFFVPLVVRIVNDDSAKCREAVASVIKILVSRVDPGRADALHAMAAKWLSDGRRAVRRSALQVCGLFVEIEGSAYARRLKTVLPLLCACLGEGVAALEAIAEADPNDESVGDDGWEISYFGLSTLAKTISAVPDALSHEDFGGAAWDAVSHLLLHPHAWVRLASCRLFGALFSRLDPATFARPGSSSPQHKKKAAAALSKDADSVDVASIAGWDYVRTPGIGMHLARAFCRQLESPFLDDTLGDQIVKNLFFLGRGFHAQPELNLPQHKDRKRGRGGEDDEEDAEEDDELTRNDDATAAADGMAEDGEDGEDDAEADGGDGDGKDRPTRMEIDGEDAKTRRLRLSAEEAAHEDAERKRMPGLAWLFKRLSYLARAEASKNPKDARK # ORIGINAL: g4052.t1 original gene structure, not modified by PASA NODE_1732_length_9482_cov_58.3177 AUGUSTUS gene 1528 9392 . + . ID=g4052;Name=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS mRNA 1528 9392 . + . ID=g4052.t1;Parent=g4052;Name=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 1528 1734 . + . ID=g4052.t1.exon1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 1528 1734 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 1983 4337 . + . ID=g4052.t1.exon2;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 1983 4337 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 4516 4665 . + . ID=g4052.t1.exon3;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 4516 4665 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 4975 5056 . + . ID=g4052.t1.exon4;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 4975 5056 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 5378 5529 . + . ID=g4052.t1.exon5;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 5378 5529 . + 2 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 5706 5774 . + . ID=g4052.t1.exon6;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 5706 5774 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 5958 6032 . + . ID=g4052.t1.exon7;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 5958 6032 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 6206 6382 . + . ID=g4052.t1.exon8;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 6206 6382 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 6682 6818 . + . ID=g4052.t1.exon9;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 6682 6818 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 7012 7378 . + . ID=g4052.t1.exon10;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 7012 7378 . + 1 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 7568 7721 . + . ID=g4052.t1.exon11;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 7568 7721 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 7958 8058 . + . ID=g4052.t1.exon12;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 7958 8058 . + 2 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 8188 8301 . + . ID=g4052.t1.exon13;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 8188 8301 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 8858 8968 . + . ID=g4052.t1.exon14;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 8858 8968 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS exon 9256 9392 . + . ID=g4052.t1.exon15;Parent=g4052.t1 NODE_1732_length_9482_cov_58.3177 AUGUSTUS CDS 9256 9392 . + 0 ID=cds.g4052.t1;Parent=g4052.t1 #PROT g4052.t1 g4052 MVVVTTDSTLARGLDELQLLFQEFTEEGDFIDFDDDFTKSSLSHESAWASTSSLPQMLEVARQPTLDPEDLQLYVNTVRCVLQPTIGRRIYSSTRHLSLQPDPFVGFSRESELFDRPLWDLCVSGATELFAAQTETDEFFGIRPRFSRGRTMSGPFMQTQARAHAHRHTITASASNSLRRALSNESLPTIRHVPLRATVDCRLRRCTSLPTLLGSRRVDAIAEYPGARVRQSQLLKRLRLSFDVPLTHHELIVAREQKLCSVRNIACDDFSAQMRTLGSHPYYSSDAFVEGPVAYGQHVLQAREKLVVLTGRSQQRFAPHFADENDAHAFLGRVCVTLAAFESSVPSSSLSQGAPADLGRSPSQDDLLAADTSSNRDVTESGWVSPDCDDFARAVSASSQLDPQNGSFVIDVAYPTVALSIDLWEEEFFPHAVPGYTGNAKQPSVVRSRPFDSTDHPEVPDFIGRIVVPLQLPSSADGRSPWDWRTPGTLGGDAVRWCLLERRPGAVNYEGRVLVRVRFMPSLAEECAQQPRGHTMYRTLVERMLASELSQYERIKREDTQVKLARASSTLGRTASDSDALDNTIRRARSGSVAASSVPKPESAGLYPGKFSAYSAFLAEEFGVRFGVGVAFRRIVLAHALAKEYERTGRVDATVVWKALSELCRDIDACFDEDHDAKSLLFRRGSTAASVRTIAVPKISLDVADVGDGGDVSGGDDGGGGVGVRGRKQRPSISGNWDRALHVTHEERKLIEITLQLMVNSQTEQLTKYKDCFPLLQFGSGSALDATVGCLGFIVSTRVFRSMQTKVPPIEQLVLSCVKRGATEMYHRLHAMAVPAVAIKGHGNVETMLRLADMVRDEVEHDDTFFDRKPPLRVAHVTCVLYSSMLTADLEALFKSVQVSVSTEVFDLYFKLRDLKKRVLEIIDKYQPPDQEPEERTTPGPPVYLGDALDLTDWFLPFVHKYIDSLDGRMRVWAQMALEGDNFKAVSTPNRCSSSVVDIFDGLDQNRDFIINLEWPDEATLGEFRTKLAESTCHVLRLSADGLLTAFIRLLTNRRRVSLTHMVGRWLPSLHGSRPATVDPGRPVDIRAEVCVCMNNVAYSQTRMYEFLDSIGIERPREENPVLSRRSSVGFLSLSSNRKRLEEIAALAQQQQQGGSEDRSERSEGGNASESSSRGAFARGTGVTTARSFTSGEASSRPTDGSRSEMSSRPGELGRSPSSGEVLYGGPQLTPLEAAIREAEAAFTNALTSMIAVGADEIKRSVWVIVLTSVGARDAAIVAEKEAQIRALKVNSKASNTGSSRKLLSPSSGWQWRAGALSVAASKPPAPRTSDAMALSVMELFQEKPLTDAEIEMILEPLGTYLRTNIDTLSKNLQPSIFVELLRRTWRDLLNDTQELFVSPMDFLSNRHVIIIYRSLMLIRAFFYADGNGVAPEVLDGEQFSVVKRATELFAAPKHELIAECD # PASA_UPDATE: g12210.t1, single gene model update, valid-1, status:[pasa:asmbl_3182,status:12], valid-1 NODE_1998_length_8169_cov_38.298 . gene 132 1087 . - . ID=g12210;Name=g12210.t1 NODE_1998_length_8169_cov_38.298 . mRNA 132 1087 . - . ID=g12210.t1;Parent=g12210;Name=g12210.t1 NODE_1998_length_8169_cov_38.298 . five_prime_UTR 826 1087 . - . ID=g12210.t1.utr5p1;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . exon 749 1087 . - . ID=g12210.t1.exon1;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . CDS 749 825 . - 0 ID=cds.g12210.t1;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . exon 537 619 . - . ID=g12210.t1.exon2;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . CDS 537 619 . - 1 ID=cds.g12210.t1;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . exon 132 304 . - . ID=g12210.t1.exon3;Parent=g12210.t1 NODE_1998_length_8169_cov_38.298 . CDS 132 304 . - 2 ID=cds.g12210.t1;Parent=g12210.t1;3_prime_partial=true #PROT g12210.t1 g12210 MVAMEKSTGRDVQHAVLTFIAGGISGCVAKTSTAPLDRLKILFQAREVHYAHLRVFQALVAIGRLEGLRGFYKGNGAMMARIFPYAATQFMAYEQYKKVRVPCFHGLYLHA # PASA_UPDATE: g12211.t1, single gene model update, valid-1, status:[pasa:asmbl_3181,status:12], valid-1 NODE_1998_length_8169_cov_38.298 . gene 1529 8091 . + . ID=g12211;Name=g12211.t1 NODE_1998_length_8169_cov_38.298 . mRNA 1529 8091 . + . ID=g12211.t1;Parent=g12211;Name=g12211.t1 NODE_1998_length_8169_cov_38.298 . five_prime_UTR 1529 1793 . + . ID=g12211.t1.utr5p1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 1529 1953 . + . ID=g12211.t1.exon1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 1794 1953 . + 0 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 2089 2401 . + . ID=g12211.t1.exon2;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 2089 2401 . + 2 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 2766 2898 . + . ID=g12211.t1.exon3;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 2766 2898 . + 1 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 3038 3195 . + . ID=g12211.t1.exon4;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 3038 3195 . + 0 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 3450 4341 . + . ID=g12211.t1.exon5;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 3450 4341 . + 1 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 4497 6129 . + . ID=g12211.t1.exon6;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 4497 6129 . + 0 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 6447 6958 . + . ID=g12211.t1.exon7;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 6447 6958 . + 2 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 7238 7324 . + . ID=g12211.t1.exon8;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 7238 7324 . + 0 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 7834 7871 . + . ID=g12211.t1.exon9;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 7834 7871 . + 0 ID=cds.g12211.t1;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . exon 8013 8091 . + . ID=g12211.t1.exon10;Parent=g12211.t1 NODE_1998_length_8169_cov_38.298 . CDS 8013 8091 . + 1 ID=cds.g12211.t1;Parent=g12211.t1 #PROT g12211.t1 g12211 MADPHGVQPPRPYVVGLGVAWPGGDAYRGGDRRAFVFATGIWIACILLLCAQQVTSNVPVGGAGLSLFFDSARRDMVSPGEQSLPATELTFEAWVRPCAHISRGVIVGYSAFDASMSPKYDEPQEFVFGFTRTTLFVRVKGVLFECTSPQCVLAGDEWRHAAVSLSASNASLTMLLDGLAVYHSTLSLDSLSAEGCLVLGQEMRTFCEEYVAESALCGGLDGVRLWRTARSASQVAADYWRAPNTTDPLLSVYYDFDNDALSPTLPNMAIGGANNPGRIGHTPTIRNLMMGSDSVVRTPTAPIFVVSSAPLSGTSFAAAALVNGSATVSIFLPVRWPLVGGVDGGTVNLTVSGQGAWTTFPTTGSEQLVTYRRTSAGLVVNATVSMGLFRPHARLGALDNMTLSASFPVEAASGAGVGMTTVAVRLFELSVDPPANATLSGSEDTPLLVPVGARDSAGQAMRVLVTSLPSRGLLYQAVFAANNSYAYGHVTADMVPLLVPITAPGTAVAGFGDHVVFAPRMDDAATGDVYDLFAFAYRLGSLVTAPAWVAVSISSLDDPPAPHPQRVRMSATDASVYITLNSTDPDGDDPPLITIAANPRFGALRQATPDATPIVVPHSQPLVQQYASAWLNVSSQFSQCGSICWSPFTCPDECTQHGWSVSNVLGPPDVYPRYADNQRAWQPLLDRGEEFVVLEYPFSIYPTGVTVYETFKPGAVVRLSVAAEWLGPQTVWSVLWEGGVQDVPERARIFSPHTCPRTVPTRFLRVDLNTKLRPGWNSIDAVGMIGYSRVPEGRIADPAGRVVYVPASGVYADAGVDFDSFSFKSEDCDAGSISDGVITLERHVPSAATLSALAAADSLRAWRTVAVSVAMDATSSAMEYASAPLFDAVVQASRDAAVLSAQQSPGTPQNAVSFMADKVVAIARGIDPVPTSHTVTVLAVHPDSMTAGLSLSLDAAGTQFIDAPFTLPAGRDYVYVRATDAVAMARIVSARTAVRIVGIVASGGFHFVVEIDVTVSPSVAVLDSGANNEAVFVGVGVGVGVPIAVLLVVAGLLHRRHAAIAARIVRAEDHLRIRIDVSELEFFEKIGEGAYGHVFRGRFRGTDVAIKRITIQGEGSPGATPSNESRVAPRPRGDTAVDARLGELSMRVKTAKKNVRRMGGTHKPEADDGMADALADFEAEVDVMVTLRHPNIVLYLGNVRSGRDLLLVTEYMERGALSETLANKATRLPFARKVEFLRDAARGLYFLHSHSPFPIVHSDIKSANFLLDRNWVVKVADFGLTALLSGDPAMEVQRGTLLWMAPEVLLSVRYTERRWPDSFPHAVSAALCPRTRIS* # ORIGINAL: g4233.t1 original gene structure, not modified by PASA NODE_747_length_18185_cov_40.3304 AUGUSTUS gene 1997 7322 . - . ID=g4233;Name=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS mRNA 1997 7322 . - . ID=g4233.t1;Parent=g4233;Name=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 6898 7322 . - . ID=g4233.t1.exon1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 6898 7322 . - 0 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 6423 6694 . - . ID=g4233.t1.exon2;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 6423 6694 . - 1 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 6078 6159 . - . ID=g4233.t1.exon3;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 6078 6159 . - 2 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 5820 5906 . - . ID=g4233.t1.exon4;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 5820 5906 . - 1 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 5415 5520 . - . ID=g4233.t1.exon5;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 5415 5520 . - 1 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 4990 5216 . - . ID=g4233.t1.exon6;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 4990 5216 . - 0 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 4726 4839 . - . ID=g4233.t1.exon7;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 4726 4839 . - 1 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 4399 4558 . - . ID=g4233.t1.exon8;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 4399 4558 . - 1 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 3810 4034 . - . ID=g4233.t1.exon9;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 3810 4034 . - 0 ID=cds.g4233.t1;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 1997 3703 . - . ID=g4233.t1.exon10;Parent=g4233.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 1997 3703 . - 0 ID=cds.g4233.t1;Parent=g4233.t1 #PROT g4233.t1 g4233 MRRNTISSNGVDRSAVSALNNPSGSGDEITLARMGSTEDLRTPLLRYDDRRAVVKPINAPASMDSSFENLWSASATPRVSDSDVQCAGESSAAAAARASRDAPTSGASSPMGRRLSGLSTRFRDSFENLSAAVTKIPEKIPKPRSLNYRQQMTLSPFAKFKRFRRFPFKFLFNFLVTLLCTIRVGMMSTQFNDYANGQHDTFDALFRPQPDFWKSPLYFVNDVIGHFNATVDAYYNYVHRSVQPVSNWHTDKDREYHIEIAAKQYVQRDPFGYGPEDLSTFTQTYHMNSTYRSTPFDNLTDTQLRRLFYRLIRVEVRFKSESIQTHGPFLNEMRYEWVCVSAYDFKSGGGQVQHLVTIYKRLLNRSGGLFLGLDLATLICAVASSLLTIKALYKAWKIFMFAKRRLANRVKRNCTEACNAITWDALSSSDKMSFFNTWYIVTLLSDAFLIAACADSIRNDGGHYTDSTEKIDGADVARAFGSFLAWINLLKFLQWRPDFYMLFLAIRCAMGRVVRYMLALLPIYMAYVVMGVVLFSNVSDKFGSLDNAAVTLFALANGDSIFEVFSELNMEEDSAYKGLGRVYLYTFCAFFITTALNVFVFIIEDGFRLASTFDKSASTDTNNAVLAQKRLRQILNAAYCSTNDPHEDEDGDADARINIVSTEDTEDDFDANDNDDNNNDNNDNIDNNGGGHGGHGGHGGHGGHGGHGGHGDDGPGRGNGRSYSETTSLMSGISYAGCGHRQSGDRMSSRDSYGTISPPPTGGYSRQSTDAVLTAAAARVGGINNDAAPDVRSNSSSNNGNSNNNVGDPARTLASSRGALSSSMRKTPGNRWRQLRNSTKVVRIMNEAARRHSLLRESDREEDMEVINRELKPRVSTGSSANVTERVETTTPTMAAPTVEIVSAVDVVGGGEASRPVNMRGGKAAGNGAMSPSFRSVGTAWRHHDESSTDSESDTPTPPTKPSTTTTSAVSTPIGSPLRVRHGFSAPSNAANATGTTAPTALYAAGVGCKCGTCASCLGSSGKSLAVPLVASSSSQPAAVFTAADVSVLMRDMQMKFADEVGRLHAEFATQMKAMQKMTLEHMEAHTRATVAAASAHATANASTPAASAPASAPDAAVPAVGGGHVDGPAASAN* # PASA_UPDATE: g4234.t1, single gene model update, valid-1, status:[pasa:asmbl_9164,status:12], valid-1 NODE_747_length_18185_cov_40.3304 . gene 8287 16651 . - . ID=g4234;Name=g4234.t1 NODE_747_length_18185_cov_40.3304 . mRNA 8287 16651 . - . ID=g4234.t1;Parent=g4234;Name=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 16541 16651 . - . ID=g4234.t1.exon1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 16541 16651 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 16189 16374 . - . ID=g4234.t1.exon2;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 16189 16374 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 15975 16043 . - . ID=g4234.t1.exon3;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 15975 16043 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 15738 15777 . - . ID=g4234.t1.exon4;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 15738 15777 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 15430 15534 . - . ID=g4234.t1.exon5;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 15430 15534 . - 2 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 14949 15091 . - . ID=g4234.t1.exon6;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 14949 15091 . - 2 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 14590 14763 . - . ID=g4234.t1.exon7;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 14590 14763 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 14181 14425 . - . ID=g4234.t1.exon8;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 14181 14425 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 13920 13993 . - . ID=g4234.t1.exon9;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 13920 13993 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 13334 13503 . - . ID=g4234.t1.exon10;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 13334 13503 . - 2 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 13133 13200 . - . ID=g4234.t1.exon11;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 13133 13200 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 12863 12906 . - . ID=g4234.t1.exon12;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 12863 12906 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 12432 12595 . - . ID=g4234.t1.exon13;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 12432 12595 . - 2 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 12106 12229 . - . ID=g4234.t1.exon14;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 12106 12229 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 11574 11896 . - . ID=g4234.t1.exon15;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 11574 11896 . - 2 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 10980 11305 . - . ID=g4234.t1.exon16;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 10980 11305 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 10717 10830 . - . ID=g4234.t1.exon17;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 10717 10830 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 9935 10556 . - . ID=g4234.t1.exon18;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 9935 10556 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 9648 9794 . - . ID=g4234.t1.exon19;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 9648 9794 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 9415 9515 . - . ID=g4234.t1.exon20;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 9415 9515 . - 0 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 9056 9148 . - . ID=g4234.t1.exon21;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 9056 9148 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 8853 8900 . - . ID=g4234.t1.exon22;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 8853 8900 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 8625 8714 . - . ID=g4234.t1.exon23;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 8625 8714 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . exon 8287 8496 . - . ID=g4234.t1.exon24;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . CDS 8454 8496 . - 1 ID=cds.g4234.t1;Parent=g4234.t1 NODE_747_length_18185_cov_40.3304 . three_prime_UTR 8287 8453 . - . ID=g4234.t1.utr3p1;Parent=g4234.t1 #PROT g4234.t1 g4234 MREHGTAEGAEPGMSSTEMRMKLLDALRGKGHVDSVKSQFRQSVIIELRRASDPRRQHRASQSLMRRAVDSLVAEHLRACGYECSLSVFLPESSMDNEQSLPRTDVLRLLHLEDHASLCTKLLADSRTTDGSREEGFLVRLLEALSESFGVPRVHEYSQTDQTQSASFELDRQLAALDNEISLKTHAAKSEANESVEERMLAYSRQCDERARAQVEEEMSRFRRNEVMRVQLQERDKYKHELEAARAELERAYAQRADKLKMDEEVAMERIRRKEQELDAANHALRQRLLDDMERIRARESEVQRLADMGSTQSRIESERLRLAEDRIVSRERELRAAEEKASKIAMEEFERRVVCRPFKAQFDREVEERVRRLDTWEADLRIKEMGITQERELRMRADSSAHEAHRVITELRDVIQTRDTDIACVKRRCEGLEKELNEMNDYLVLKDSCERLKVEVSSLQSHLADAVIADKAKSAEYALTIDRLRDGLQRPAAELALVREEHERERQAWIKEKGVLQHKLQELYGRARLEASRATDLTKKVEDDELTVRELRKEIADLRLQLHHSQTGMSSCAALVLPVRAANLAFPRPLGTGLLRADVDPALMGLGEKLDLKGVGQGYFNANLPNEGPSLGTALAVGRGRRPKSPSAVAVGVSEAIDKSRHYMQSAQQAESELDETEAKLESAHRRLQERSSARSASTALAADFLAFASADAAIVSTENVFRARDGVYAAKTSSELHEEEAERELRAAAALEKRTKERQAADALSREASERARQRKDELEKAVRESSERKMEERALKEAEAARERVREATRQKDRDFAEADARARIVSVAEPLRQQPVAAPMPTPAPAQSAPAIAPVTAPTALERKDSVPLATAGVTTTAAADARPNSAVDEERRRTAEALALHRKAEEEEDARNVAEEEARRKLIEEKRREVEARRREAEELERRRKDLEEQRLRKEREETARKQAAEDERAQNEIRERQRQERLERERVRKELEEMERRQKADEERRQVELREKQQREAEQREQEERAAEERKRRDERERAEKEEREKKQKEEEEEKARRGPDPLDKYMKIVMEKRSKEAASKSVEHSRSSTLSPGTLTPSETSESRSSRSRRDQSDRTPREKTKADSSLESIGSVGGGRKSDRSDKSGSSSARSDGSSRRKSSRRSRSRSRTPTDESDVPFSLGGDSVSSIKLDSSGSEGQW* # ORIGINAL: g4232.t1 original gene structure, not modified by PASA NODE_747_length_18185_cov_40.3304 AUGUSTUS gene 260 1604 . + . ID=g4232;Name=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS mRNA 260 1604 . + . ID=g4232.t1;Parent=g4232;Name=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 260 874 . + . ID=g4232.t1.exon1;Parent=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 260 874 . + 0 ID=cds.g4232.t1;Parent=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 1077 1206 . + . ID=g4232.t1.exon2;Parent=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 1077 1206 . + 0 ID=cds.g4232.t1;Parent=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS exon 1507 1604 . + . ID=g4232.t1.exon3;Parent=g4232.t1 NODE_747_length_18185_cov_40.3304 AUGUSTUS CDS 1507 1604 . + 2 ID=cds.g4232.t1;Parent=g4232.t1 #PROT g4232.t1 g4232 MTGEAPASPLISGRFLANVQAISGLCFSTFLSLHLTNTALANLGPSAYDAAQAVFRNYYHAPLVEYGILGGSLVAHVTSSAILYLRKKSAAAKAAAARKKSDDDHPIAAVDSKKDASTGTWDGVGRSLHRYTGFILTAFIPGHVLATRFVPSVLYPIVSKNAASPFADFTTVTYSVQEAFGWGFSIYYVVLALSGLFHMSYGIFKAIGTLSPSAKKNGVFKALWNGKTLQRMLLFGAAAVIVSGVFAISGFYFDVPIPRADLYHEVEANLFALIKGLYTQ* # PASA_UPDATE: g4235.t1, single gene model update, valid-1, status:[pasa:asmbl_9165,status:12], valid-1 NODE_747_length_18185_cov_40.3304 . gene 17080 18051 . + . ID=g4235;Name=g4235.t1 NODE_747_length_18185_cov_40.3304 . mRNA 17080 18051 . + . ID=g4235.t1;Parent=g4235;Name=g4235.t1 NODE_747_length_18185_cov_40.3304 . five_prime_UTR 17080 17104 . + . ID=g4235.t1.utr5p1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . exon 17080 17227 . + . ID=g4235.t1.exon1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . CDS 17105 17227 . + 0 ID=cds.g4235.t1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . exon 17367 17568 . + . ID=g4235.t1.exon2;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . CDS 17367 17568 . + 0 ID=cds.g4235.t1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . exon 17649 17690 . + . ID=g4235.t1.exon3;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . CDS 17649 17690 . + 2 ID=cds.g4235.t1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . exon 17785 17858 . + . ID=g4235.t1.exon4;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . CDS 17785 17858 . + 2 ID=cds.g4235.t1;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . exon 17980 18051 . + . ID=g4235.t1.exon5;Parent=g4235.t1 NODE_747_length_18185_cov_40.3304 . CDS 17980 18051 . + 0 ID=cds.g4235.t1;Parent=g4235.t1;3_prime_partial=true #PROT g4235.t1 g4235 MWRISTSCSFCVLFFDKGYRARSSFVKDGTMDEDEFIFGDEDADLLDVPTALDINAQASSHSIHGGVKQTINAAISRIVGTRDVEVPTEDRGKRRGSCVDGLGVHIQAYFVTIATILGTGILGLPIRLSDAGFGPFIITFLINWVVQVMLICFMLELLQKAAAFGEGAVSK # ORIGINAL: g13300.t1 original gene structure, not modified by PASA NODE_1025_length_14569_cov_38.6744 AUGUSTUS gene 2388 3367 . - . ID=g13300;Name=g13300.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS mRNA 2388 3367 . - . ID=g13300.t1;Parent=g13300;Name=g13300.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 3172 3367 . - . ID=g13300.t1.exon1;Parent=g13300.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 3172 3367 . - 0 ID=cds.g13300.t1;Parent=g13300.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 2388 2869 . - . ID=g13300.t1.exon2;Parent=g13300.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 2388 2869 . - 2 ID=cds.g13300.t1;Parent=g13300.t1 #PROT g13300.t1 g13300 MLSLFAPLRSAAAVASRFLSALPAAVPTRVSPVYAAMRSTQFPSITARAATNSAEKAALMKLRAKYQQRKRRHMPKVIPLPDSMKRVLLPEAEVDSPKAMKTDLLNFLEHRAIQKRRSQIPIPYFTPGSIVSVTRVDAKSSPRRRGFVGICVAKYNKGYSSSFTLRNYIRGHAIELTFPLYSPLIIDINVIKLQRFRRAKLYYLRNRPPSESTVDMKLAKMSTQL* # ORIGINAL: g13302.t1 original gene structure, not modified by PASA NODE_1025_length_14569_cov_38.6744 AUGUSTUS gene 8802 12179 . - . ID=g13302;Name=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS mRNA 8802 12179 . - . ID=g13302.t1;Parent=g13302;Name=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 12014 12179 . - . ID=g13302.t1.exon1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 12014 12179 . - 0 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 11155 11869 . - . ID=g13302.t1.exon2;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 11155 11869 . - 2 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 10717 10849 . - . ID=g13302.t1.exon3;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 10717 10849 . - 1 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 10483 10571 . - . ID=g13302.t1.exon4;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 10483 10571 . - 0 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 10079 10236 . - . ID=g13302.t1.exon5;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 10079 10236 . - 1 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 9785 9925 . - . ID=g13302.t1.exon6;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 9785 9925 . - 2 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 9457 9530 . - . ID=g13302.t1.exon7;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 9457 9530 . - 2 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 9177 9273 . - . ID=g13302.t1.exon8;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 9177 9273 . - 0 ID=cds.g13302.t1;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS exon 8802 8992 . - . ID=g13302.t1.exon9;Parent=g13302.t1 NODE_1025_length_14569_cov_38.6744 AUGUSTUS CDS 8802 8992 . - 2 ID=cds.g13302.t1;Parent=g13302.t1 #PROT g13302.t1 g13302 MKYVVVSGGVISGIGKGILASSVGVILKACGLRVTSIKIDPYLNIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDITLHRDNNLTTGKVYKEVIEKERRGDYLGKTVQVVPHVTNEIQDWIQRVALKAVDDTGATPDVCVIELGGTIGDIESMPFVEALRQFQFRVGRENFCQLHVSLVPTVGSSSEQKTKPTQHSIRELRGLGLSPDMIVCRSTKPLEDGVKEKISMFCHVSPKQVLSVHDCSSIYRVPLVLESQGIIEYFGERLNLQGMIMSPHKGSLLNKWTKLADRYDRLYESVKIVIVGKYTGLGDAYLSVTKALQHASLAAGRKLVLEWVEATDLEPDTKKSNPVRYFEAWQRLCSSSGILVPGGFGNRGIEGKIAAARWARENSIPYFGICLGLQIAVIEFARNVLGWEDANSTEVNEATTRPVVVFMPEISKTHLGGTMRLGKRRTIFKDPACITRKLYSIVYGAKDLEYVEERHRHRFEVNPEVVPELESHGMKFVGQDIEGERMEIMELKGHKFFVAVQYHPEYLTRPLRPSPVFLGFVLASAGMLDEYMAKGTGVERYSGMSPSPSFVLDAE* # PASA_UPDATE: g13301.t1, single gene model update, valid-1, status:[pasa:asmbl_86,status:3], valid-1 NODE_1025_length_14569_cov_38.6744 . gene 3920 8198 . + . ID=g13301;Name=g13301.t1 NODE_1025_length_14569_cov_38.6744 . mRNA 3920 8198 . + . ID=g13301.t1;Parent=g13301;Name=g13301.t1 NODE_1025_length_14569_cov_38.6744 . five_prime_UTR 3920 4006 . + . ID=g13301.t1.utr5p1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 3920 4076 . + . ID=g13301.t1.exon1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 4007 4076 . + 0 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 4442 4599 . + . ID=g13301.t1.exon2;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 4442 4599 . + 2 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 4939 5030 . + . ID=g13301.t1.exon3;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 4939 5030 . + 0 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 5267 5390 . + . ID=g13301.t1.exon4;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 5267 5390 . + 1 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 5665 5819 . + . ID=g13301.t1.exon5;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 5665 5819 . + 0 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 6048 6175 . + . ID=g13301.t1.exon6;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 6048 6175 . + 1 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 6458 6558 . + . ID=g13301.t1.exon7;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 6458 6558 . + 2 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 6903 7068 . + . ID=g13301.t1.exon8;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 6903 7068 . + 0 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . exon 7388 8198 . + . ID=g13301.t1.exon9;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . CDS 7388 7872 . + 2 ID=cds.g13301.t1;Parent=g13301.t1 NODE_1025_length_14569_cov_38.6744 . three_prime_UTR 7873 8198 . + . ID=g13301.t1.utr3p1;Parent=g13301.t1 #PROT g13301.t1 g13301 MLSKSVRSARPMWTRVLVSQFHAGAVASAKKPEMPPCDFKPMPYEGPTFEEVLALRKKHISPGVIMYYKNPVLVHQGHMQWLFDHKGNRYLDMFAGIVTVSVGHCHPHTVAAAKKQLDTLWHTTNIYPHPKIHEYAKRLADKMPGNLKVVYFVNSGSEANDLAMMMARLYTGNFDILALRNAYHGMSPYTMGLTNVSTWKYNLAHGFGIHHAMNADPYRGHFGGANCRDSPCSLDKTCDCTPGQCKAGVKYADDIKDVIMHSTSGKVAAFFAESIQGVGGTVQFPVGYLKRAYDHVRAHGGVCVADEVQTGFGRLGSHFWGFESHGVMPDIVSMAKGIGNGWPLAAVVTTPEIAKVLAQRLHFNTFGGNPVACAVGMATLDVMEKENTQENCRIVGTHLLERLEGLKRKHKVIGDVRGKGLMIGVEMVKDRDARTPANEECARVWERAREMGVLLGKGGLYGNVIRIKPPMIITKADADFTVDVLDVALSEL* # PASA_UPDATE: g13303.t1, single gene model update, valid-1, status:[pasa:asmbl_87,status:12], valid-1 NODE_1025_length_14569_cov_38.6744 . gene 12738 13759 . - . ID=g13303;Name=g13303.t1 NODE_1025_length_14569_cov_38.6744 . mRNA 12738 13759 . - . ID=g13303.t1;Parent=g13303;Name=g13303.t1 NODE_1025_length_14569_cov_38.6744 . exon 13661 13759 . - . ID=g13303.t1.exon1;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . CDS 13661 13759 . - 0 ID=cds.g13303.t1;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . exon 13265 13395 . - . ID=g13303.t1.exon2;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . CDS 13265 13395 . - 0 ID=cds.g13303.t1;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . exon 12738 12914 . - . ID=g13303.t1.exon3;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . CDS 12818 12914 . - 1 ID=cds.g13303.t1;Parent=g13303.t1 NODE_1025_length_14569_cov_38.6744 . three_prime_UTR 12738 12817 . - . ID=g13303.t1.utr3p1;Parent=g13303.t1 #PROT g13303.t1 g13303 MEAFALDGILARHVLPAVRQTDDLAGAVDKMAAVIKSTPLEWIRPLDGSKPRPPLDVIKTQLRGLSVRIRLMGISAGPQLLQRALRLLLLVDDRSEVEKLAREWAVAL* # PASA_UPDATE: g13299.t1, single gene model update, valid-1, status:[pasa:asmbl_85,status:12], valid-1 NODE_1025_length_14569_cov_38.6744 . gene 242 1823 . + . ID=g13299;Name=g13299.t1 NODE_1025_length_14569_cov_38.6744 . mRNA 242 1823 . + . ID=g13299.t1;Parent=g13299;Name=g13299.t1 NODE_1025_length_14569_cov_38.6744 . exon 242 1823 . + . ID=g13299.t1.exon1;Parent=g13299.t1 NODE_1025_length_14569_cov_38.6744 . CDS 242 1615 . + 0 ID=cds.g13299.t1;Parent=g13299.t1 NODE_1025_length_14569_cov_38.6744 . three_prime_UTR 1616 1823 . + . ID=g13299.t1.utr3p1;Parent=g13299.t1 #PROT g13299.t1 g13299 MTAISEREEIRPSFSSLPIEVVVHHVTKYLDEKDVFSLADVNGALRLSLRHVRVYRLSLETSKRYYGDAGFRGTLQALIPRRKIAVSLLKCKYVDDTSVLEGIYSADLRSCFGLRQANGLQGLHSLDLSGCLNLRAVSSLSTIHTLNLGDCINLDDVSALSSVHTLNLRACTNLRDVSSLGNVHNLNISLCRQITDVSALGTVHTLDISKCAGIRDVSALGGVHSLKMRGCAGVQDIACLGTIHTLDVSEMSGMTTVPQSFGGIHTLNIGNTGVSDVSALGKVHSLNLSRCANVCDVSALGNVHILNLNGCTLIEDVSMLGRVHTLRLRGCNAVVDVSALGNVHTLDLSFCTGVTVVSALGRVHTLNLRGCLMNNVSALGGVHTLDLGSCVNVVDVSMLGKVHALDLSDCKCVTDVSSLGTVDTLDLRGCVGITTVACLAGVRMLNISGSWRTQLTQ* # ORIGINAL: g6863.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 AUGUSTUS gene 30513 31559 . - . ID=g6863;Name=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS mRNA 30513 31559 . - . ID=g6863.t1;Parent=g6863;Name=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 31535 31559 . - . ID=g6863.t1.exon1;Parent=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 31535 31559 . - 0 ID=cds.g6863.t1;Parent=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 31141 31332 . - . ID=g6863.t1.exon2;Parent=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 31141 31332 . - 2 ID=cds.g6863.t1;Parent=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 30513 30781 . - . ID=g6863.t1.exon3;Parent=g6863.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 30513 30781 . - 2 ID=cds.g6863.t1;Parent=g6863.t1 #PROT g6863.t1 g6863 MNEIDPDYVVIGETRNYNYERMQLAVNLVRRGAKLIGTNVDIYDKSLNGVNPGTGCLVAPIELATGAKAYYLGKPNPLMLRLAMRKLGCDPKDTVIIGDRMDTDIIGGIESGIETVLVLSGVTTMDELNRYAYRPDHILGSVSDIMSLTKMEHTTPVKGFN* # PASA_UPDATE: g6858.t1, single gene model update, valid-1, status:[pasa:asmbl_3475,status:3], valid-1 NODE_208_length_31571_cov_42.2741 . gene 15617 18886 . + . ID=g6858;Name=g6858.t1 NODE_208_length_31571_cov_42.2741 . mRNA 15617 18886 . + . ID=g6858.t1;Parent=g6858;Name=g6858.t1 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 15617 15742 . + . ID=g6858.t1.utr5p1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 15617 15869 . + . ID=g6858.t1.exon1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 15743 15869 . + 0 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 16010 16162 . + . ID=g6858.t1.exon2;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 16010 16162 . + 2 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 16316 16419 . + . ID=g6858.t1.exon3;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 16316 16419 . + 2 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 16536 16664 . + . ID=g6858.t1.exon4;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 16536 16664 . + 0 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 16773 16908 . + . ID=g6858.t1.exon5;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 16773 16908 . + 0 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 17057 17241 . + . ID=g6858.t1.exon6;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 17057 17241 . + 2 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 17374 17464 . + . ID=g6858.t1.exon7;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 17374 17464 . + 0 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 17629 17795 . + . ID=g6858.t1.exon8;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 17629 17795 . + 2 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 17989 18140 . + . ID=g6858.t1.exon9;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 17989 18140 . + 0 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 18284 18420 . + . ID=g6858.t1.exon10;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 18284 18420 . + 1 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . exon 18588 18886 . + . ID=g6858.t1.exon11;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . CDS 18588 18694 . + 2 ID=cds.g6858.t1;Parent=g6858.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 18695 18886 . + . ID=g6858.t1.utr3p1;Parent=g6858.t1 #PROT g6858.t1 g6858 MARLIALAAVMAFVGTVVAIPVHHHLFRGGAMNRMLDHQDKLNRMLGVPAAKTYDPQWFTQKVNHFDPSDERVWKQRFFINADYWKGPGSPIFLMIGGEGPIGDRYVTQFSFVEDAKAQGALILALEHRFYGESFPTPDASVASLKLLSSQHALADLAYFRMEMTNKLNAPTSRWLTFGGSYPGSLSSYARQKYPHLFHASVDSSGPVLAELNFYQYLEVCESALRYYGGDTCVSSVTTAIKQIQDLIATKEGREQLATTFKTCDPIATADDIPNFMQTMAGNVMGVVQYNNEASNTTVQVICDTMAASDDKLKNFAALNDILLADSNITCLDAGYDSFLKATRATSIGGGAVGGRAWLYQTCQEFGYYQTSDSPTSHVFGNLFPLDFSLKICRDIYDGLDTYSAADFESRIDWTNAYYGGRNVVATNILHVHGTIDPWHALGVTASNDPKQPAILITGTAHCANMRLAKDSDIPALVAARNATSAQITAWLAQP* # PASA_UPDATE: g6862.t1, single gene model update, valid-1, status:[pasa:asmbl_3479,status:12], valid-1 NODE_208_length_31571_cov_42.2741 . gene 29169 29947 . + . ID=g6862;Name=g6862.t1 NODE_208_length_31571_cov_42.2741 . mRNA 29169 29947 . + . ID=g6862.t1;Parent=g6862;Name=g6862.t1 NODE_208_length_31571_cov_42.2741 . exon 29169 29947 . + . ID=g6862.t1.exon1;Parent=g6862.t1 NODE_208_length_31571_cov_42.2741 . CDS 29169 29639 . + 0 ID=cds.g6862.t1;Parent=g6862.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 29640 29947 . + . ID=g6862.t1.utr3p1;Parent=g6862.t1 #PROT g6862.t1 g6862 MTASRGVVMDGRVWSRDFIAMCIEIDRRCMQVHKAIADVIKMCDRVQPDALPISAGFTSHLINGGTEDLLVPATAAAHTELSVRDCLSIANGRRWWLTDRAIRRIVQEINAALVHMACAVNVSVILEGDTPPDCVDADPDTVTLIAFRGSSVHLRT* # PASA_UPDATE: g6857.t2, single gene model update, valid-1, status:[pasa:asmbl_3474,status:3], valid-1 # PASA_UPDATE: g6857.t1, single gene model update, valid-1, status:[pasa:asmbl_3473,status:3], valid-1 NODE_208_length_31571_cov_42.2741 . gene 13929 15130 . - . ID=g6857;Name=g6857.t2 NODE_208_length_31571_cov_42.2741 . mRNA 13929 15130 . - . ID=g6857.t2;Parent=g6857;Name=g6857.t2 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 15085 15130 . - . ID=g6857.t2.utr5p1;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . exon 15013 15130 . - . ID=g6857.t2.exon1;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . CDS 15013 15084 . - 0 ID=cds.g6857.t2;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . exon 14706 14801 . - . ID=g6857.t2.exon2;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . CDS 14706 14801 . - 0 ID=cds.g6857.t2;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . exon 13929 14368 . - . ID=g6857.t2.exon3;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . CDS 14228 14368 . - 0 ID=cds.g6857.t2;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 13929 14227 . - . ID=g6857.t2.utr3p1;Parent=g6857.t2 NODE_208_length_31571_cov_42.2741 . mRNA 13929 15130 . - . ID=g6857.t1;Parent=g6857;Name=g6857.t2 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 15085 15130 . - . ID=g6857.t1.utr5p1;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . exon 15013 15130 . - . ID=g6857.t1.exon1;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . CDS 15013 15084 . - 0 ID=cds.g6857.t1;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . exon 14706 14837 . - . ID=g6857.t1.exon2;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . CDS 14706 14837 . - 0 ID=cds.g6857.t1;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . exon 13929 14368 . - . ID=g6857.t1.exon3;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . CDS 14228 14368 . - 0 ID=cds.g6857.t1;Parent=g6857.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 13929 14227 . - . ID=g6857.t1.utr3p1;Parent=g6857.t1 #PROT g6857.t2 g6857 MFYKFNGATGRVELAARESAYNPQRAYATASASHSGAVDSLTFKHNDVRVKQHSALGNPHIPTYLRGARDPIIFRGLMLVTVVCAAGCLAATVGMVLGKNKK* #PROT g6857.t1 g6857 MFYKFNGATGRVELAARESAYNPQGFSKPVSISAEQRAYATASASHSGAVDSLTFKHNDVRVKQHSALGNPHIPTYLRGARDPIIFRGLMLVTVVCAAGCLAATVGMVLGKNKK* # ORIGINAL: g6856.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 AUGUSTUS gene 13040 13891 . + . ID=g6856;Name=g6856.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS mRNA 13040 13891 . + . ID=g6856.t1;Parent=g6856;Name=g6856.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 13040 13183 . + . ID=g6856.t1.exon1;Parent=g6856.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 13040 13183 . + 0 ID=cds.g6856.t1;Parent=g6856.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 13289 13891 . + . ID=g6856.t1.exon2;Parent=g6856.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 13289 13891 . + 0 ID=cds.g6856.t1;Parent=g6856.t1 #PROT g6856.t1 g6856 MDTIDYSNATTAGWFMVGYGILVLYGLVDKSVKLRLPAALVEIYNVVQVIWNVGIIGLIVASLYESYHGRGVIYFYGSPASTWQENAYLATAVYVYYLNKFADLIDTLIIVLHGKTEQLSFLHVSHHISIVWCMWAGVYVFNPPDAFLSVLINALIHVIMYSYYFLAARKVRMPVIVKKSITTLQQLQFVLLSIQSAFGLRYYPSSSWQYTSAAVTLFEVTALFILFSLWRQRAYADKGASGKAKKQS* # PASA_UPDATE: g6859.t1, single gene model update, valid-1, status:[pasa:asmbl_3478,status:12], valid-1 NODE_208_length_31571_cov_42.2741 . gene 19730 23994 . + . ID=g6859;Name=g6859.t1 NODE_208_length_31571_cov_42.2741 . mRNA 19730 23994 . + . ID=g6859.t1;Parent=g6859;Name=g6859.t1 NODE_208_length_31571_cov_42.2741 . exon 19730 19849 . + . ID=g6859.t1.exon1;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . CDS 19730 19849 . + 0 ID=cds.g6859.t1;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . exon 20071 20273 . + . ID=g6859.t1.exon2;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . CDS 20071 20273 . + 0 ID=cds.g6859.t1;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . exon 20614 23994 . + . ID=g6859.t1.exon3;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . CDS 20614 23839 . + 1 ID=cds.g6859.t1;Parent=g6859.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 23840 23994 . + . ID=g6859.t1.utr3p1;Parent=g6859.t1 #PROT g6859.t1 g6859 MLHGIDGLAADGQATVRNVTIYVSGSLNGNFLPLRDMPDWADEYGGLARIATVLRARFDTALAETGTNATAVLAVDTGAFISVSVFDQFAPQPRIIDIAVSMGFSLFSLTATELYMGNKNFLSNYDNRPTIDVLSSNIVFNAGASARIRGVLRPFAVRVINNVTMGFLSFIDVGFCSRAISACGPGTEQIQDVVDTTEHEVAVAVDRLVATLLPSRPDMILVTCPRTLVDLAVSTSLWRYLARAGVDVVMLNDGNYWTQAEAVNATFVPPPTVELVDEKTGRRLIVASSLTNGRSIAKVDLSVHSSASNGSFVSVRPATTTHILTRPCKANSTMAWPDCVSSPAADVEAVMAQMDRDVNAQVDTTVVGMLKNPLPGSSFNCRFKECGSGDLLADAMVAQLPNCDIAFVNGGGIRGGFLAGNVTSRALLNAYPFQNTASSFTLRGNVLLDVIRHGLALIDNITDVPSAVRGGTGRYLQYSGLRIRYNPFNPMETRLLSLDVETSPGQYGVFNGFVLYRCCTLSYLLDGGDDFTMLRQNAIQRVNYPITQGELVRKYLSDFPDGFDAHFGTRIIIDANSSIAVCSPPCSHGMCTANFTCVCDSEWTGIDCGTLKPVDVCEVHRSHGSTLFRAHGVIERYKSGVAVVVLFAVLFGAEVVSVPFFTRRFSRVVRKTSTHSNGIVKSARWTTPNIVRLALLVFQSIQIHAIVLNVEVSDSYVSSNGKVFGSLGATSVSVSFFWFYWLIMSVTLLWIAYASMYILDGGSFLRRSAVGRAFLLPADQLLQLWVTGGFIPTLLNGMRTFHCWYLHDSDGNSSAFMAVDGVCGVACWSGEHWSYIVVAFVTILVYYPLATISSILWQDLNPLQDIRYAPHAFVFEPLIKVALVIMRVYFTNEPSVFLPIVGAICAATAIYHRYSNPCYVVWINAPASLTYVSASLTAMLLLIGWETNVPRVYYGMPAVWGSIALVAFVYLYRIYPDPLVKRRARIHATQARDMLMSMRKVFTARRTSAFASNMSLHTIRFPPQYRGSAHGAEIRPSILEIRSIAQQTVSAAVESGAINEKVGRWFDSVAVGNVTWPASLFAGSEDEDAFLVAVCELYQLATATAQKSGSTIMALSEIQAEAAIIVEADCIADEYNVNHRPSVTVVDDGAAINTSTVTAESDGMRSSPATTDDSLPGSVGKT* # PASA_UPDATE: g6854.t1, single gene model update, valid-1, status:[pasa:asmbl_3472,status:3], valid-1 NODE_208_length_31571_cov_42.2741 . gene 3879 6989 . - . ID=g6854;Name=g6854.t1 NODE_208_length_31571_cov_42.2741 . mRNA 3879 6989 . - . ID=g6854.t1;Parent=g6854;Name=g6854.t1 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 6748 6989 . - . ID=g6854.t1.utr5p1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . exon 6322 6989 . - . ID=g6854.t1.exon1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . CDS 6322 6747 . - 0 ID=cds.g6854.t1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . exon 6053 6139 . - . ID=g6854.t1.exon2;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . CDS 6053 6139 . - 0 ID=cds.g6854.t1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . exon 5378 5766 . - . ID=g6854.t1.exon3;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . CDS 5378 5766 . - 0 ID=cds.g6854.t1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . exon 4924 5059 . - . ID=g6854.t1.exon4;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . CDS 4924 5059 . - 1 ID=cds.g6854.t1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . exon 3879 4741 . - . ID=g6854.t1.exon5;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . CDS 3923 4741 . - 0 ID=cds.g6854.t1;Parent=g6854.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 3879 3922 . - . ID=g6854.t1.utr3p1;Parent=g6854.t1 #PROT g6854.t1 g6854 MAPNFTALVRQCTRRLSIVSRSHAAEFSTGLFTHNTQLLSALPVPSSALLISAGGPSTHVRAAVVRQFATSPRKWLMNKRVAQQSVPQSPRTPLSRGLSLSAKVAFVATAAGVGAFAYSPKLQQEGKLTVIAIARFLRASYTAVVISLDYKLSLRNIADDTSEEYRVVRNKVHQRAADRILSLCRWAGGIYIKGGQHVGALDYLLPAEYVHTLKVLHNQAPRTELKEVSRVFKEDVGKGLAELFLEFDSEPIGAASLAQVHRAVRASDGAVVAVKVQHPFVRERSEGDMRTIEIITKFISWMFPEFEFAWLAEEMRRNLPVELDFVQEGRNADELRALFRSTKYLKIPEIHWDLTSRRVLTMEFIDGGKVDDVEYMQKNKIDVNEVSRRLKHVFSEMIYLHGFVHCDPHPGNVLVQPPRGAFDGPKIILLDHGLYQRLSREFRLNYCRLWKALIEFDEAGIRESAARLGGDEATYHLFACMLTGRTWDAIETGIGALPTSPEEIEFVRRNMSRYLVDIAGILNRVPRPLLLLLKTNDLLRSVDHVLQTNTLAQSFAVIARLCIRAIHEDELSRHPTVMRRMRILLSGLWNSVRVTLYETALWIISPFVRPLISGAPPL* # ORIGINAL: g6852.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 . gene 122 771 . + . ID=g6852;Name=g6852.t1 NODE_208_length_31571_cov_42.2741 . mRNA 122 771 . + . ID=g6852.t1;Parent=g6852;Name=g6852.t1 NODE_208_length_31571_cov_42.2741 . exon 122 771 . + . ID=g6852.t1.exon1;Parent=g6852.t1 NODE_208_length_31571_cov_42.2741 . CDS 122 388 . + 0 ID=cds.g6852.t1;Parent=g6852.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 389 771 . + . ID=g6852.t1.utr3p1;Parent=g6852.t1 #PROT g6852.t1 g6852 DFFADDELRLPWRFNDPHKRTVRVHHYPPLSLSRCTHDWAWKMKNQFVRFRSAPAAHRPPRPPQSSDTPHPLYYSDSDSDDDTSSASE* # PASA_UPDATE: g6853.t1, single gene model update, valid-1, status:[pasa:asmbl_3471,status:3], valid-1 NODE_208_length_31571_cov_42.2741 . gene 761 3722 . - . ID=g6853;Name=g6853.t1 NODE_208_length_31571_cov_42.2741 . mRNA 761 3722 . - . ID=g6853.t1;Parent=g6853;Name=g6853.t1 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 3567 3722 . - . ID=g6853.t1.utr5p1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . five_prime_UTR 2829 3214 . - . ID=g6853.t1.utr5p2;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 3567 3722 . - . ID=g6853.t1.exon1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 2724 3214 . - . ID=g6853.t1.exon2;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . CDS 2724 2828 . - 0 ID=cds.g6853.t1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 2293 2441 . - . ID=g6853.t1.exon3;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . CDS 2293 2441 . - 0 ID=cds.g6853.t1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 1829 1962 . - . ID=g6853.t1.exon4;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . CDS 1829 1962 . - 1 ID=cds.g6853.t1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 1464 1644 . - . ID=g6853.t1.exon5;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . CDS 1464 1644 . - 2 ID=cds.g6853.t1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . exon 761 1183 . - . ID=g6853.t1.exon6;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . CDS 778 1183 . - 1 ID=cds.g6853.t1;Parent=g6853.t1 NODE_208_length_31571_cov_42.2741 . three_prime_UTR 761 777 . - . ID=g6853.t1.utr3p1;Parent=g6853.t1 #PROT g6853.t1 g6853 MCVSAGRLQPVITRPVPSDGDQTACKDAEKELSFMGWGLIPSFTKDRVEFSTLLNTINARDDNLTTSPIYRRLLNKRRCVVLCEGFFEWLKSGKMKIPYYIRPKRKEGESKFPPLLLMAGLYDIRHLDDGTEERTFTIITTEPNSEFRWLHDRMPVILTQDEADQWMDASRPFEDVVRLVRPAPPNRIEWYQVSQEVNKIGNDSPACTKPIPEKGKITGFFQRSPKKAAAPASCTTIANDGGDGGRIANADVTTNNCGATFTNSSGTAANSDDGCVHTAVGLGEATAARRERVESSVYGDECMPRKRTKLDAQDVQPAVTIHSQ* # ORIGINAL: g6860.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 AUGUSTUS gene 24674 26907 . - . ID=g6860;Name=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS mRNA 24674 26907 . - . ID=g6860.t1;Parent=g6860;Name=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 26590 26907 . - . ID=g6860.t1.exon1;Parent=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 26590 26907 . - 0 ID=cds.g6860.t1;Parent=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 25997 26173 . - . ID=g6860.t1.exon2;Parent=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 25997 26173 . - 0 ID=cds.g6860.t1;Parent=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 24674 25732 . - . ID=g6860.t1.exon3;Parent=g6860.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 24674 25732 . - 0 ID=cds.g6860.t1;Parent=g6860.t1 #PROT g6860.t1 g6860 MHSSVHRKRWSLWALLCTAGTLLAASSLVNGNSIYAEVTLRISGNESARFIAAPAKFGTTSTTFATVRGNLVVPARMDGCGEYSLVVPAGHAIVLLERGGCTFAEKSVWAFIAGAAAAIVYDNRDVSGLVFMSADTEMQPQSVPSFFVVRSDGLYMAAAAAMGVQVTISSSTTTTNNDASGWDATIFLIVSVTLTTTVATIGGLAIYAVYKRRVQTSDQPPPHALRKELLDQIPTKIYHKVAASGADQAGAANESSTVRRADVDVAAAVDRNNNQAQTMQSSVVRGNQPSVAMAIPCADAPRDGNAGSRPGYWRRLMRRRRIQEARGTGGEGNARGFSLFACCRRGRRADLPLVHAASTETHASECAVDDLAMATTDGAGELPEDAAAAAVALEEAEHAEDFGGDVCPICLEDYEEGDCLRVLYCLHTYHVQCIDEWLLKRSGTCPLCKRSVLPDAAGERPPPLAVGAARRESLSIATEATSSVDGRHVRTDPADGSMFDIQLNTPGTSVDGNGLVV* # ORIGINAL: g6855.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 AUGUSTUS gene 7518 12484 . - . ID=g6855;Name=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS mRNA 7518 12484 . - . ID=g6855.t1;Parent=g6855;Name=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 12412 12484 . - . ID=g6855.t1.exon1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 12412 12484 . - 0 ID=cds.g6855.t1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 12133 12309 . - . ID=g6855.t1.exon2;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 12133 12309 . - 2 ID=cds.g6855.t1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 11854 12022 . - . ID=g6855.t1.exon3;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 11854 12022 . - 2 ID=cds.g6855.t1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 11594 11707 . - . ID=g6855.t1.exon4;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 11594 11707 . - 1 ID=cds.g6855.t1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 7935 11475 . - . ID=g6855.t1.exon5;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 7935 11475 . - 1 ID=cds.g6855.t1;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 7518 7811 . - . ID=g6855.t1.exon6;Parent=g6855.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 7518 7811 . - 0 ID=cds.g6855.t1;Parent=g6855.t1 #PROT g6855.t1 g6855 MTGMPSLGKPNARPRPVDDDDDASNEPAGKIARKELPESVGLFDDEGEEGVPDSEVDAGSTLLTVLLRQAGADIKNPGYLTQLRVDPSEFRRRLRARITGHKGYPAIMVEVFEGIGQIFDDTESFQRVLSPVGTGNDRISALQDSLVRLLLGIDEVQPTLINMLLEKLPEYMMDDDADVGQGGDGTNIPRLIISQLRWLDNIVDCGKLTTKLVELLAIAPLHVQREIVSAIPEIVDDSKHDEVAEGLHDMIFGASRGLTAAVLDTLSNLTLNATLRERIRGSVLDAIPSVEANDLPVVVRFLLQSAQKEEATAAIAQLRRTLDLNSLGAPIANAPDRSIVGGLAGNVVSQRMSQKTGKTPGRTAASAESMTLDVIRSAIRFQRPVTDAWVRSLQSCSPDAPLVALDVFVLLCLHSMASHRKTSEALAKKRCGDGSLDRKLLAAIFRNHPASLRDHFQALLSLGASLLRSGDSYTIEIASEIYKRSFAAFDTYHRQEIVGALVTHVGSGSSWEINAALTVLCDIAIETPKEMCPFAVFVRGVLDYLDSLDLGQVRRLFSVLTILSTRSVEGGAAADFALSDDAHIVIRKQLSNSSPRYRRMGIVAAVAVVHHATLAAVDDPPLLEAAVQQCIALLELCKVSCRTPDCLALLCDELADALQVPSTTNASTEDSQKRMPEALIAWISENIAANFQTEFLGETEGAPSLFMGCHCQQVANLDGDEAPIVLNLFPLSAPPVGSDGLPLSSAAGPSGPPRAGERLQALHPMFRLLQACEKALNNGSLDNIDALLGSPVLMPDSELVIQVLRQHPSNVREVTCASLLSAANWFREVVNAYATESAEDMVKKVLRRIQSIVETDAQLINAIGASPTFRPYPATFEYDTALNKQQHAGAKGKKDAAVKAGREETKKGKAPAKEAGSDDDDDGASTVTASTGKQPAKLPSAQSALPKESMREIDFDVFGLLIHELRLPVDGDRDGSLHLEPSQLRFLLSDLSGKLDKALVSSTKKAVPFFAKGKRGESCHARLLRMPVRVLASRGTTLVPHLCAHLETIFNAFKAMSDVTDSAESQMNDADTIERLAECYELGLLCLHSLLSWEGMLAPTNSRILSRLLGSIAARIGENVTSQAPAHRSAGEAFDYLYRFAGALPSLSVVVALTRCLSAIVRHAAPAARATLNARISELCGKVLERGPGETGAKQDHIAFLLRAHISSAKDPLAVIGVFTNQVLPGLVKEAEGRTFESKSHPTLNNTSIGTFYRVLLEETVMSLKGNDSFVDRATMMPRILQSVSALHSLLNLTKTFERKPILAAALRCGRNFIDVFVRVSMPVLDAEFRRLKDEGLAILKALQMGTRLLQTLCGHSKVIQDVAMTAHVPLLKKGLETIIFRVKAMLELNNCREAFWLGNLKHRDIQGREVASQVAESESEADNDKDDDGDDDDDDDDDGEEEGEGEEEEGEADD* # ORIGINAL: g6861.t1 original gene structure, not modified by PASA NODE_208_length_31571_cov_42.2741 AUGUSTUS gene 28459 29046 . + . ID=g6861;Name=g6861.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS mRNA 28459 29046 . + . ID=g6861.t1;Parent=g6861;Name=g6861.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 28459 28607 . + . ID=g6861.t1.exon1;Parent=g6861.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 28459 28607 . + 0 ID=cds.g6861.t1;Parent=g6861.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS exon 28887 29046 . + . ID=g6861.t1.exon2;Parent=g6861.t1 NODE_208_length_31571_cov_42.2741 AUGUSTUS CDS 28887 29046 . + 1 ID=cds.g6861.t1;Parent=g6861.t1 #PROT g6861.t1 g6861 MEMRVDGLGGLMGNLHRAIDVTASDARRRPAPGHVGAAVSAFKSDDDDDILYGTSSEADNDEGAVSQIDDASLDHPLLHLGPNGVQGLKNTGKWKPQNTFGS* # ORIGINAL: g8577.t1 original gene structure, not modified by PASA NODE_3853_length_2623_cov_39.6601 AUGUSTUS gene 609 1097 . - . ID=g8577;Name=g8577.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS mRNA 609 1097 . - . ID=g8577.t1;Parent=g8577;Name=g8577.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS exon 609 1097 . - . ID=g8577.t1.exon1;Parent=g8577.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS CDS 609 1097 . - 0 ID=cds.g8577.t1;Parent=g8577.t1 #PROT g8577.t1 g8577 MSYSRARSSDASHDTSFSSDSQQQQHSNTDAFYSQPVFILEDEEVEKKAPKKGSFFGFGRSAEEKKAPWKTESESGFSAETGFSSEPTNSAHVSDSQRARTQSSGFDDGASSSSEGFGSDEGYRKHEAGEWDGTKGNEQQQPNQESFVIKHMVCTRSDGLAV* # ORIGINAL: g8578.t1 original gene structure, not modified by PASA NODE_3853_length_2623_cov_39.6601 AUGUSTUS gene 1585 2552 . + . ID=g8578;Name=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS mRNA 1585 2552 . + . ID=g8578.t1;Parent=g8578;Name=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS exon 1585 1665 . + . ID=g8578.t1.exon1;Parent=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS CDS 1585 1665 . + 0 ID=cds.g8578.t1;Parent=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS exon 1822 1968 . + . ID=g8578.t1.exon2;Parent=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS CDS 1822 1968 . + 0 ID=cds.g8578.t1;Parent=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS exon 2418 2552 . + . ID=g8578.t1.exon3;Parent=g8578.t1 NODE_3853_length_2623_cov_39.6601 AUGUSTUS CDS 2418 2552 . + 0 ID=cds.g8578.t1;Parent=g8578.t1 #PROT g8578.t1 g8578 MASKFIAGSFLPDFLTGDIEIIYTETQLLIVSVVMTVVLAVALGWGLSFVLEDIEKDKERVRLRKAADDAYRAGGESQDDTSADELFKRYNQAKEKLDKLAEERAGLTANNSVSEDSEKK* # ORIGINAL: g6122.t1 original gene structure, not modified by PASA NODE_2848_length_4979_cov_35.2588 AUGUSTUS gene 2861 4815 . - . ID=g6122;Name=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS mRNA 2861 4815 . - . ID=g6122.t1;Parent=g6122;Name=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS exon 4539 4815 . - . ID=g6122.t1.exon1;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS CDS 4539 4815 . - 0 ID=cds.g6122.t1;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS exon 4072 4156 . - . ID=g6122.t1.exon2;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS CDS 4072 4156 . - 2 ID=cds.g6122.t1;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS exon 3349 3406 . - . ID=g6122.t1.exon3;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS CDS 3349 3406 . - 1 ID=cds.g6122.t1;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS exon 2861 2917 . - . ID=g6122.t1.exon4;Parent=g6122.t1 NODE_2848_length_4979_cov_35.2588 AUGUSTUS CDS 2861 2917 . - 0 ID=cds.g6122.t1;Parent=g6122.t1 #PROT g6122.t1 g6122 MDRDTSHKQSDSDSDKDYFGNQVTPAAKKGAPVAAPKPADVPKKEEPAAKKSGWLSDAPAIAPVATKEKADLSSLKGLPSLGGAKTAPAVKTASKELGSLFEPSSKRPTGLSRSPLLSDGGSDEESMGDGFGGGFSPARKDRSKGYSDDDFEESDDDI* # PASA_UPDATE: g6121.t1, single gene model update, valid-1, status:[pasa:asmbl_5114,status:12], valid-1 NODE_2848_length_4979_cov_35.2588 . gene 92 2093 . - . ID=g6121;Name=g6121.t1 NODE_2848_length_4979_cov_35.2588 . mRNA 92 2093 . - . ID=g6121.t1;Parent=g6121;Name=g6121.t1 NODE_2848_length_4979_cov_35.2588 . five_prime_UTR 2006 2093 . - . ID=g6121.t1.utr5p1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . exon 1735 2093 . - . ID=g6121.t1.exon1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . CDS 1735 2005 . - 0 ID=cds.g6121.t1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . exon 1134 1323 . - . ID=g6121.t1.exon2;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . CDS 1134 1323 . - 2 ID=cds.g6121.t1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . exon 858 1012 . - . ID=g6121.t1.exon3;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . CDS 858 1012 . - 1 ID=cds.g6121.t1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . exon 512 600 . - . ID=g6121.t1.exon4;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . CDS 512 600 . - 2 ID=cds.g6121.t1;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . exon 92 178 . - . ID=g6121.t1.exon5;Parent=g6121.t1 NODE_2848_length_4979_cov_35.2588 . CDS 92 178 . - 0 ID=cds.g6121.t1;Parent=g6121.t1;3_prime_partial=true #PROT g6121.t1 g6121 MRPNVSPLAGIHRKCVRVVVLIAGLAGVALATQPQHAIVHAAAVSATTADIGIQPSGSFFTEALALRAVGRGFYAAHFRFTNDWEVASESLGHYTLFPKSIGSIFVAHPTLRRLSLSFARGRWREEQWGLPWAHTNPAGAVLWASFAGGDNSTGDSAMNTEDCDGRFRLLTSAIAGVFCSGLNAADASRTAATEWNVPWGTVGKDETIRRVSLPHDLVCTENLTPWLKQLPCREESGLASLLNPRRLFASSFFSMSVDVERKCK # PASA_UPDATE: g1078.t1, single gene model update, valid-1, status:[pasa:asmbl_5137,status:12], valid-1 NODE_2860_length_4917_cov_37.0382 . gene 364 2434 . + . ID=g1078;Name=g1078.t1 NODE_2860_length_4917_cov_37.0382 . mRNA 364 2434 . + . ID=g1078.t1;Parent=g1078;Name=g1078.t1 NODE_2860_length_4917_cov_37.0382 . exon 364 450 . + . ID=g1078.t1.exon1;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . CDS 364 450 . + 0 ID=cds.g1078.t1;Parent=g1078.t1;5_prime_partial=true NODE_2860_length_4917_cov_37.0382 . exon 592 665 . + . ID=g1078.t1.exon2;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . CDS 592 665 . + 0 ID=cds.g1078.t1;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . exon 901 1045 . + . ID=g1078.t1.exon3;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . CDS 901 1045 . + 1 ID=cds.g1078.t1;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . exon 1339 1846 . + . ID=g1078.t1.exon4;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . CDS 1339 1846 . + 0 ID=cds.g1078.t1;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . exon 2101 2434 . + . ID=g1078.t1.exon5;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . CDS 2101 2186 . + 2 ID=cds.g1078.t1;Parent=g1078.t1 NODE_2860_length_4917_cov_37.0382 . three_prime_UTR 2187 2434 . + . ID=g1078.t1.utr3p1;Parent=g1078.t1 #PROT g1078.t1 g1078 IKVKRKYMWTDEAGDETAAGSGLDAMVARCFRGSKLLATSVFKAILEELKMIEDIPMLVAIDELNTLFDKTTFRDFDYDVVHPHQTTLMHLMGEFFNDEKSLRYGAFVFSYSRSGDVLTEKEFAKSDWELYRRRFRPYSPQQSVVMQWLIRNAAAAAEAQTPDAIARLHQRMLGDMLGVDLARANRLPGEDASRATLRDPKGFADLHWALFRDASRAPTEELRKVTSADVLAPKLFDTWTGGALSVKVPFLTRAESASAVSYAKERGLISKPVTEKLQEELFQMTSGNPRILYKTIKFA* # ORIGINAL: g1080.t1 original gene structure, not modified by PASA NODE_2860_length_4917_cov_37.0382 AUGUSTUS gene 4169 4630 . - . ID=g1080;Name=g1080.t1 NODE_2860_length_4917_cov_37.0382 AUGUSTUS mRNA 4169 4630 . - . ID=g1080.t1;Parent=g1080;Name=g1080.t1 NODE_2860_length_4917_cov_37.0382 AUGUSTUS exon 4512 4630 . - . ID=g1080.t1.exon1;Parent=g1080.t1 NODE_2860_length_4917_cov_37.0382 AUGUSTUS CDS 4512 4630 . - 1 ID=cds.g1080.t1;Parent=g1080.t1 NODE_2860_length_4917_cov_37.0382 AUGUSTUS exon 4169 4242 . - . ID=g1080.t1.exon2;Parent=g1080.t1 NODE_2860_length_4917_cov_37.0382 AUGUSTUS CDS 4169 4242 . - 2 ID=cds.g1080.t1;Parent=g1080.t1 #PROT g1080.t1 g1080 TVRVHRLIARNTIEEPILNRAVEKLKLERDVSSSNAGVAAAAEIEADAAVCGNILSIALTLEC* # PASA_UPDATE: g1079.t1, single gene model update, valid-1, status:[pasa:asmbl_5138,status:12], valid-1 NODE_2860_length_4917_cov_37.0382 . gene 2555 3796 . + . ID=g1079;Name=g1079.t1 NODE_2860_length_4917_cov_37.0382 . mRNA 2555 3796 . + . ID=g1079.t1;Parent=g1079;Name=g1079.t1 NODE_2860_length_4917_cov_37.0382 . five_prime_UTR 2555 2648 . + . ID=g1079.t1.utr5p1;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . exon 2555 2716 . + . ID=g1079.t1.exon1;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . CDS 2649 2716 . + 0 ID=cds.g1079.t1;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . exon 2938 3190 . + . ID=g1079.t1.exon2;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . CDS 2938 3190 . + 1 ID=cds.g1079.t1;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . exon 3474 3796 . + . ID=g1079.t1.exon3;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . CDS 3474 3527 . + 0 ID=cds.g1079.t1;Parent=g1079.t1 NODE_2860_length_4917_cov_37.0382 . three_prime_UTR 3528 3796 . + . ID=g1079.t1.utr3p1;Parent=g1079.t1 #PROT g1079.t1 g1079 MLKPKVLTEVLKQANTSGVESTVLLNHEGALLAFAGDSDKEARVTAAIAFNVWNTYEKSGRQAFDNDQLDFVLVSCDDGRVAITKVAKLLLCIYAKKTVEFGLLKAKAEALVRYLEEPLKQVIV* # ORIGINAL: g2768.t1 original gene structure, not modified by PASA NODE_5713_length_743_cov_69.7994_potentialcontaminant AUGUSTUS gene 2 743 . + . ID=g2768;Name=g2768.t1 NODE_5713_length_743_cov_69.7994_potentialcontaminant AUGUSTUS mRNA 2 743 . + . ID=g2768.t1;Parent=g2768;Name=g2768.t1 NODE_5713_length_743_cov_69.7994_potentialcontaminant AUGUSTUS exon 2 743 . + . ID=g2768.t1.exon1;Parent=g2768.t1 NODE_5713_length_743_cov_69.7994_potentialcontaminant AUGUSTUS CDS 2 743 . + 1 ID=cds.g2768.t1;Parent=g2768.t1 #PROT g2768.t1 g2768 GFNLLAPETVVHHIVPYLSNVDVSSLAKVNRTLHAHLRQKRLYHLWPLYNRKYIEDATFREEVTATIPVGRLVLDGCDRGEANPQLEAFAGVYSACVNSNPVRPDLSPLRNVQELVLSGGRLDVSLFLCLQRLSMNRGRIVNAALLSRVPVIELTDVQLDSLEFVNVTRVKLVSCSLPVHVGITNISGLRNVRFVTLERLGHLVDVSPLANAIEVTIEKCDSVSRESLLTLGGVKKLFYRPSRTTYD # ORIGINAL: g9341.t1 original gene structure, not modified by PASA NODE_1596_length_10273_cov_42.7231 AUGUSTUS gene 537 4177 . - . ID=g9341;Name=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS mRNA 537 4177 . - . ID=g9341.t1;Parent=g9341;Name=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 4139 4177 . - . ID=g9341.t1.exon1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 4139 4177 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 3853 3970 . - . ID=g9341.t1.exon2;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 3853 3970 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 3689 3750 . - . ID=g9341.t1.exon3;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 3689 3750 . - 2 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 3417 3554 . - . ID=g9341.t1.exon4;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 3417 3554 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 2929 3121 . - . ID=g9341.t1.exon5;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 2929 3121 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 2655 2780 . - . ID=g9341.t1.exon6;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 2655 2780 . - 2 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 2293 2381 . - . ID=g9341.t1.exon7;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 2293 2381 . - 2 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 2075 2166 . - . ID=g9341.t1.exon8;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 2075 2166 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 775 1936 . - . ID=g9341.t1.exon9;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 775 1936 . - 1 ID=cds.g9341.t1;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 537 650 . - . ID=g9341.t1.exon10;Parent=g9341.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 537 650 . - 0 ID=cds.g9341.t1;Parent=g9341.t1 #PROT g9341.t1 g9341 MEEVTVTDAVYSDHLHLKLLRNISPPDGQPDTPADARPLAVASRTGVVAFARGLRTIIVAKSSDVFDADGGDAIANSKAFTTQFDVLHLSINCDGALLALASGSAVQVYHLAALFSSAPGPLPPAAIPPLREDGPIDGIRWNPCDADLLLVRLQSGSASVWRTSADQPKRTCAVSIGNALVSEACWGPKGKQFACGGKDGSIVQFGVDGAVKRTLQPPPSQKDKAVIGLYWLENFVFAVAFEEDSSPTLGIIYADKTKSVATLFPDAFLCTGPGESRIIFAGLWDWNLVIAACTTSSDVLVMGQTDPETYRMLSLPEGATVQMPLSADDNDTFPLGCAIDVTLRGGDGSGDGDEDGPPCPGAVLMNTTGHLISYDLVNLRSKETPSFLVRPSDIPANATPRQPTALSSTAPATAAAAPAPAAASAPKSTFSLVGAPAVPASASALPGLALTGGSALPGGGLSFAMPSPAPSSAATAMPFGSFSAIDKSVAPALSTSTPIQGLGTSLTTPFSGSFNATKTPAVPLFGAAAAPTGGSTTPAPRPLAPAALSATPAGDASGGAKIPVPLFGAGSSGAAPPTSSFMASTPASSGTAPAPAFGFSAVKPSVPAFGLAPKALDAQGMATPQVASGAALASAPPSKLGGGAATGAAGAQPPLAPASASIASQPPAAAAAMPPPTQSASQAPNGAAAAGQKSAAPAPTQAARPASSATA # ORIGINAL: g9343.t1 original gene structure, not modified by PASA NODE_1596_length_10273_cov_42.7231 AUGUSTUS gene 7352 9719 . + . ID=g9343;Name=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS mRNA 7352 9719 . + . ID=g9343.t1;Parent=g9343;Name=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 7352 8135 . + . ID=g9343.t1.exon1;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 7352 8135 . + 0 ID=cds.g9343.t1;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 8393 8546 . + . ID=g9343.t1.exon2;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 8393 8546 . + 2 ID=cds.g9343.t1;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 8752 8804 . + . ID=g9343.t1.exon3;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 8752 8804 . + 1 ID=cds.g9343.t1;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 8993 9147 . + . ID=g9343.t1.exon4;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 8993 9147 . + 2 ID=cds.g9343.t1;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 9480 9719 . + . ID=g9343.t1.exon5;Parent=g9343.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 9480 9719 . + 0 ID=cds.g9343.t1;Parent=g9343.t1 #PROT g9343.t1 g9343 MGGQEDADPGEEYAPLVPDDVNIAHAEVRVDCAGGKGKGKSARGARNTSGSSFGDLGYSGGNGCGSNNSGRRSAFGRAAQWCGCADPALANTDNGSGLLSRLLRIDRKTAIALALGQILSLLITGTGLTSNLLTSRHSVYIPTAQSFLNYALLAAVYGTVLVRRGNLRSLFRAHWLKYAVLALIDVEANFLVVKAYEYTTFTSVQLLDCFAIPSVVVLSWLVLRVRYRPVHVAGICICLGGLGALVASDVKYNTADGSNSAKNPAVGDVLCLAGALLYGVSNVAQEFMVRRFDRVEYLAFLGAFATVISGVQMAIVERSNIADIDWSWEIALLLVGFALCLFFLYSLVPVLIVLSSATFLNLSLLTADFYTLLFGLFVFHLKFAALYFVGFALVVCGLIVYNAIPTPIQLEAAPGYDANAVLGTADEDECEGDAGEEARDGPLLVAADKSLTATAASAHLL* # ORIGINAL: g9342.t1 original gene structure, not modified by PASA NODE_1596_length_10273_cov_42.7231 AUGUSTUS gene 4745 6991 . - . ID=g9342;Name=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS mRNA 4745 6991 . - . ID=g9342.t1;Parent=g9342;Name=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 6928 6991 . - . ID=g9342.t1.exon1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 6928 6991 . - 0 ID=cds.g9342.t1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 6614 6825 . - . ID=g9342.t1.exon2;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 6614 6825 . - 2 ID=cds.g9342.t1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 6322 6459 . - . ID=g9342.t1.exon3;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 6322 6459 . - 0 ID=cds.g9342.t1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 6039 6169 . - . ID=g9342.t1.exon4;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 6039 6169 . - 0 ID=cds.g9342.t1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 5432 5719 . - . ID=g9342.t1.exon5;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 5432 5719 . - 1 ID=cds.g9342.t1;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS exon 4745 5300 . - . ID=g9342.t1.exon6;Parent=g9342.t1 NODE_1596_length_10273_cov_42.7231 AUGUSTUS CDS 4745 5300 . - 1 ID=cds.g9342.t1;Parent=g9342.t1 #PROT g9342.t1 g9342 MDDELEDFASSDDGSDERTQHVPLRKYGVAPNARVETPSAALNRKYAFVTPPRMKETTGHGNAHTRGASAPALAVNGAAVQAQMHSRSKRTMKEARIASTIDDIESPEDSTPSSSPPRPFAHALAARDPAAAAVTRRPVRRGNGVGEDIEGFGSSEDDAEASAPVCRVWPCVAVHCSPRSARGPLGDQLRRALAAYHSDRTLWLHECSKTTAAPPSSAATVCVSTIHDRPAYTVVVFDALQIPATACLPPRFATVVSSDLAHVLKFTPSVVLDVWPPWLRIDGCAGLPFVLNLARALPSDCHGGARARGTMDASAALSLERRETFRGPVSAAATPTITSGPLGGSRTDTAPPPAPPRVLRPTPIRSIDPYQPAICIAGTVVGVVGVGSDSAHPMVAVEDGTGGCIVRCGGPSAAGGGVHPGAPGERFESGALRVVGRTRELHAHGLGMYISQGIAFILAPAD* # ORIGINAL: g14064.t1 original gene structure, not modified by PASA NODE_5293_length_922_cov_41.9787 AUGUSTUS gene 314 514 . + . ID=g14064;Name=g14064.t1 NODE_5293_length_922_cov_41.9787 AUGUSTUS mRNA 314 514 . + . ID=g14064.t1;Parent=g14064;Name=g14064.t1 NODE_5293_length_922_cov_41.9787 AUGUSTUS exon 314 514 . + . ID=g14064.t1.exon1;Parent=g14064.t1 NODE_5293_length_922_cov_41.9787 AUGUSTUS CDS 314 514 . + 0 ID=cds.g14064.t1;Parent=g14064.t1 #PROT g14064.t1 g14064 QDGVDLKLLTRVLASQAQIAEPDQPWDWDKTFTEISSELQAEQESAKAPDANDEDAKAIKDTKGLE* # ORIGINAL: g338.t1 original gene structure, not modified by PASA NODE_2237_length_7120_cov_38.2197 AUGUSTUS gene 3956 4983 . - . ID=g338;Name=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS mRNA 3956 4983 . - . ID=g338.t1;Parent=g338;Name=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 4933 4983 . - . ID=g338.t1.exon1;Parent=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 4933 4983 . - 0 ID=cds.g338.t1;Parent=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 4407 4593 . - . ID=g338.t1.exon2;Parent=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 4407 4593 . - 0 ID=cds.g338.t1;Parent=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 3956 4143 . - . ID=g338.t1.exon3;Parent=g338.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 3956 4143 . - 2 ID=cds.g338.t1;Parent=g338.t1 #PROT g338.t1 g338 MLSTVARVARTSRAANQMCRVRRQFADDAKKSAPKPAAEPPKATAAASATAAKPATAAAPATAAAPAAPATPKPADAPKVESFKPRIGTSSANVGATVPDPEVSSVYKNTQHHKFDVYTYYDVDANMAKHRLAQPTPVPKA* # PASA_UPDATE: g339.t1, single gene model update, valid-1, status:[pasa:asmbl_3849,status:3], valid-1 NODE_2237_length_7120_cov_38.2197 . gene 5642 6919 . - . ID=g339;Name=g339.t1 NODE_2237_length_7120_cov_38.2197 . mRNA 5642 6919 . - . ID=g339.t1;Parent=g339;Name=g339.t1 NODE_2237_length_7120_cov_38.2197 . five_prime_UTR 6674 6919 . - . ID=g339.t1.utr5p1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . exon 6628 6919 . - . ID=g339.t1.exon1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . CDS 6628 6673 . - 0 ID=cds.g339.t1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . exon 6301 6501 . - . ID=g339.t1.exon2;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . CDS 6301 6501 . - 2 ID=cds.g339.t1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . exon 5995 6173 . - . ID=g339.t1.exon3;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . CDS 5995 6173 . - 2 ID=cds.g339.t1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . exon 5642 5878 . - . ID=g339.t1.exon4;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . CDS 5795 5878 . - 0 ID=cds.g339.t1;Parent=g339.t1 NODE_2237_length_7120_cov_38.2197 . three_prime_UTR 5642 5794 . - . ID=g339.t1.utr3p1;Parent=g339.t1 #PROT g339.t1 g339 MAGEQGALLLRKQLQELSKNPVEGFSAGLIDDNDIYKWEVMIIGPPDTLYEGGFFKAHLIFPKEYPQRPPKMKFITEVYHPNVHSNGDVCISILHEPGEDKWGYEKASERWLPIHTVETILLSVISILSDPNDESPANLDAAKDWRERREEFRRKVQNCVRKSQEMAFD* # ORIGINAL: g337.t1 original gene structure, not modified by PASA NODE_2237_length_7120_cov_38.2197 AUGUSTUS gene 2 3024 . + . ID=g337;Name=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS mRNA 2 3024 . + . ID=g337.t1;Parent=g337;Name=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 2 100 . + . ID=g337.t1.exon1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 2 100 . + 1 ID=cds.g337.t1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 446 631 . + . ID=g337.t1.exon2;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 446 631 . + 1 ID=cds.g337.t1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 952 1107 . + . ID=g337.t1.exon3;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 952 1107 . + 1 ID=cds.g337.t1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 1282 1645 . + . ID=g337.t1.exon4;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 1282 1645 . + 1 ID=cds.g337.t1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 1798 1922 . + . ID=g337.t1.exon5;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 1798 1922 . + 0 ID=cds.g337.t1;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS exon 2232 3024 . + . ID=g337.t1.exon6;Parent=g337.t1 NODE_2237_length_7120_cov_38.2197 AUGUSTUS CDS 2232 3024 . + 1 ID=cds.g337.t1;Parent=g337.t1 #PROT g337.t1 g337 AVGLSCAEFESTGRGLRAERTFLEGDTLIAVPRHLLLTARSVLASSNPFAEQVKASSPCLSPLDTLVAYLIYERRRCRVCCDGCSCTAIPSGACGASNTDTVTPPSCYHPYLDVLPTSYGTPLSMGRTCWKLMMPHTATAAVQLRERALASFARITAFFEAHPAVMKWTCGHADPHSAEFSPSAAMEDHIWSWCAVNSRTVYVDESTSRTSTGGLRIPAAASNGEHYALAPFLDMLNHSVSADVDGRYDATLDAYVLTTNSAIASQSEAFIMYGGHDSTALLCEYGFVVPNNPNDAALLDGAIAGVVSCLTSLSSGVRRPPTAAHSSPRLQELADMWLYDTLQSSMPTRGRIARTPLQLSSLFDAKVLAHKDRLLSAHSLSDSLACGWDGPSYRTLVAARILAMSKAELSEWAAVMSGAEISHDNECLAGWIVGVACKRELARCGVRISQAESLVLDAVGAGASGWGHQEWTAFVRSRALPLERTDLFTRENDSLYLSTSTAGSGSDEHTAAFTAWLQCVGEAERRVHLPGKQCASCRCVEDTWVAHVALLLTTLAWSAVTSVTVITETVKRR* # ORIGINAL: g12498.t1 original gene structure, not modified by PASA NODE_2652_length_5539_cov_47.961 AUGUSTUS gene 607 4465 . + . ID=g12498;Name=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS mRNA 607 4465 . + . ID=g12498.t1;Parent=g12498;Name=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS exon 607 1149 . + . ID=g12498.t1.exon1;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS CDS 607 1149 . + 0 ID=cds.g12498.t1;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS exon 1425 1491 . + . ID=g12498.t1.exon2;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS CDS 1425 1491 . + 0 ID=cds.g12498.t1;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS exon 1862 3365 . + . ID=g12498.t1.exon3;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS CDS 1862 3365 . + 2 ID=cds.g12498.t1;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS exon 3571 3622 . + . ID=g12498.t1.exon4;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS CDS 3571 3622 . + 1 ID=cds.g12498.t1;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS exon 4262 4465 . + . ID=g12498.t1.exon5;Parent=g12498.t1 NODE_2652_length_5539_cov_47.961 AUGUSTUS CDS 4262 4465 . + 0 ID=cds.g12498.t1;Parent=g12498.t1 #PROT g12498.t1 g12498 MWCPDQPSVDADAFDVTAEQQQQPVPAGMKRSRSLEELQRRIGPMPTIDRDLLPELFAKDVPFETLERIENLEKRWKTFAKNKQLDERHTYSTWRRWHKERVSPSTADPSPVAGTPGSASSEAGSAKTDDLTRSISKRIDNAIWRAWHRHRNYLAAKAKQAQSTQPASTSMEWLESPLVMDDQLLEMFDFSTFEFTIDPRLGSGMGVPLDDLLHLDGGDSGLGSTSTAIVSADNNINNNNNNRGAIPRAAAMKAETEGHDVDMTSVFEQPSLGSANAVAVHAERLTEQQQLQQQQEQIRLLQQQIHNHQQIIQQQQWQQQQQQQQQQQQQQQQQQQQQHHARVLSAAATSVAPPTQHTLQSQSKRKSSTAPTSTPASTNSRRKTPRTSPGRPEAALPLAMSTMQDSMQPFLQASLQQQQQHQQQQQQQQQQQQRLLQQQQQQLQQLHHQLSLGLGGVTGIPGMASLAAASHPSLGAQFGVGLAASLGDFGGDFGAMSGSASSPGGVLRREQLRSEQQALEFEQRRLIESEQAQMMRALSAPDVALHSGGGVGAVVGAGVGIGSEGAGFTVGYAGDDAMSGDDGISGDSDDDEDDDGKPVGKGKGKGSSNNNSNSNSRRGSLSESRRAAHIEAEKKRRNNIKSGFDELAIILPTCQRKFPNQKFSKASVLVKTIDYIGAMTRGNTTQIDELQRLQREALALRLVNAKYQQLLQSKMAMGMKTKFRTFIEALFTSFNATVNLSTFDAMLTSIFLWLEQYCQSPTLRDIVLSAARDISARLLSLEAMHRMRP* # ORIGINAL: g3535.t1 original gene structure, not modified by PASA NODE_3821_length_2680_cov_36.0415 AUGUSTUS gene 198 2381 . - . ID=g3535;Name=g3535.t1 NODE_3821_length_2680_cov_36.0415 AUGUSTUS mRNA 198 2381 . - . ID=g3535.t1;Parent=g3535;Name=g3535.t1 NODE_3821_length_2680_cov_36.0415 AUGUSTUS exon 198 2381 . - . ID=g3535.t1.exon1;Parent=g3535.t1 NODE_3821_length_2680_cov_36.0415 AUGUSTUS CDS 198 2381 . - 0 ID=cds.g3535.t1;Parent=g3535.t1 #PROT g3535.t1 g3535 MESPTKMNSAISTATEKKVRPCLDYIDSVRRLLKDVDTVQVPRIVVCGEQSSGKSSLLETMSGVGLPRGKNIVTRTPLELRLRKDPEFRITIQASEPADDGTLPDIEITQETEIKLEETASKINEYTNLLVGDSKDVQDKPIFLTVYSPDVFDMTLIDLPGITRNSLEGQSENIEELINNMITKYIVEDHTIIVCVVAANEDITRSGALKLASKVDKDTERTLCVLTKCDEAASDKERKATVEATLSGDHKAGGAPHLHLGYIGVRNRLHSEEKESIEGVRRNESKFFQKAFPQLSQGKKDGNCTVESLSEKLADIQFKKVLKAIPTIHKQVREDLLRVEKALKSLPHHLTTSKQRRDHIRKFARKLQEDYKKLSSGDYDELLSTDMEPSTRLQFAQDMVEIYEEFAGDLEAKTADFFSHEFVEKTQSAIKSTRVPDKLPNFLSSPAFRKLYQEQLQSYMASCRKLADEMKRCVEEVLLELIHKSSLVPYPLLLHIGREKVRTLVAGKHTAVSAYIDLLMRQETVPLTFSREYGDMLREGKAIISNKGSPARSFEDTPKKSPKKSAVSPSVPNSTHNQWSKFTDLVESGDFEDQELDMVLSLHAYANITRRRIADNAIKCCHYAYVQVLTGNAATTEDVEGDCDLSTTFERLISDLDDNDAAAVTAGDSATPAQPPILDDVMWCEDPEQSALRSDLEERQRHLLRAIALEKGLPAVAMISHTAKGSG* # PASA_UPDATE: g10408.t1, single gene model update, valid-1, status:[pasa:asmbl_1708,status:12], valid-1 NODE_1477_length_11051_cov_45.5036 . gene 1579 7144 . - . ID=g10408;Name=g10408.t1 NODE_1477_length_11051_cov_45.5036 . mRNA 1579 7144 . - . ID=g10408.t1;Parent=g10408;Name=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 7120 7144 . - . ID=g10408.t1.exon1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 7120 7144 . - 0 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 6742 6871 . - . ID=g10408.t1.exon2;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 6742 6871 . - 2 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 6395 6636 . - . ID=g10408.t1.exon3;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 6395 6636 . - 1 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 5265 6080 . - . ID=g10408.t1.exon4;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 5265 6080 . - 2 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 4996 5099 . - . ID=g10408.t1.exon5;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 4996 5099 . - 2 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 4566 4632 . - . ID=g10408.t1.exon6;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 4566 4632 . - 0 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 3884 4185 . - . ID=g10408.t1.exon7;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 3884 4185 . - 2 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 3465 3658 . - . ID=g10408.t1.exon8;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 3465 3658 . - 0 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 2550 3319 . - . ID=g10408.t1.exon9;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 2550 3319 . - 1 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . exon 1579 2138 . - . ID=g10408.t1.exon10;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . CDS 1966 2138 . - 2 ID=cds.g10408.t1;Parent=g10408.t1 NODE_1477_length_11051_cov_45.5036 . three_prime_UTR 1579 1965 . - . ID=g10408.t1.utr3p1;Parent=g10408.t1 #PROT g10408.t1 g10408 MGDAAVVQADPAQAQGTGRYIYTKEFLLSFQSICTACPPHLADINKDILQTQAEYEARLAASRTAKQQAGGAQAGGAPSSPLVTSARPPPERSSRFMPDFKQGDEQPSASAVERGLPSAGPRDLHPFFPQAATADPSPLDMHRRAFASELRQHREPHSDRGDSKNFRESGRGRESRDVRGAAPGASGGSGDFHRGDRGDGREFDRDRRDPSGYFSRGDVQGRAGDTGSRRGGVSGGRYNGNSRDGGGHPGSRDSRDGAFGSSSRGRFDSRYERDGDRSIGGRGGFRGSNYDSRDRRDDHHGGGGGHHDDNVPEWFSEAPSSALEVIELGGLPDEDKQRAGAGGKDPKRDWRTNDDWRSEFTKGSARERTDSTSSRNESERNNGESESSRARLTSYNSETDRNDADIDDVIASVSRARIREDSMSGLDVDDIVSRNLLGQSMGEATPAKESSRFSHFFGPSDADDSPSVDEPASFLPSSLLAEDMGLDDPSPSHGSGRAQQQSQQQQQQQQQQQPQHRDGRASSYSDGQPAQPASGLSAFDRLVASIASTGNKPPPPLPAQSAQAMDARTLESQSRGTPDAGRTQPSAQPNMVALQQQQQQMQQLQQQQLAQQQLAQQQQGKQLPTAKPATSTLPKSSMNSFMPTSVIKHMSTQKKKEQQQQQQQQQQQQQQGQPLTQTNAPPGLSLQQQPHGSDANGQRLAQQQQQLQLQQQQQQQQQMHMSTPSLQHVLHPQMPDSQGRQPASYDMQYGAPPSHMQPPQPLGMPTHPMGHPMHPPMDMSSQGQRQPQQQQQQYPGGPYGMGVGVGMASQQRQPQPQPGSASDIGAQQWSQGSQGVGGNGPSYHPAMVMGYGMAPPGMHGPPGHAQYGMPPMGGPGQYDARGQGAVPQQMDPNLMRWFGGGQMQQAGMPAMPQMPQMPQMAMQAGRILSVEELERRRMGL* # PASA_UPDATE: g10409.t1, single gene model update, valid-1, status:[pasa:asmbl_1709,status:3], valid-1 NODE_1477_length_11051_cov_45.5036 . gene 8147 9033 . + . ID=g10409;Name=g10409.t1 NODE_1477_length_11051_cov_45.5036 . mRNA 8147 9033 . + . ID=g10409.t1;Parent=g10409;Name=g10409.t1 NODE_1477_length_11051_cov_45.5036 . five_prime_UTR 8147 8203 . + . ID=g10409.t1.utr5p1;Parent=g10409.t1 NODE_1477_length_11051_cov_45.5036 . exon 8147 9033 . + . ID=g10409.t1.exon1;Parent=g10409.t1 NODE_1477_length_11051_cov_45.5036 . CDS 8204 8962 . + 0 ID=cds.g10409.t1;Parent=g10409.t1 NODE_1477_length_11051_cov_45.5036 . three_prime_UTR 8963 9033 . + . ID=g10409.t1.utr3p1;Parent=g10409.t1 #PROT g10409.t1 g10409 MSTSFSISLPFALPDADELVPLLARTTAVATLTYWVMLAFLGKNTRIPIKQLALVHYTLLIAVSAVTFAGAMWAAVEKAMEDKSIEGLACVREGGVIDRRLYFWMVIFHATKYVELLDTTFPIWKGTGFSRFQAYHHTVVMWQTLIWLATDFALGIFGTIANSFVHIVMYYFYLQGSQGVRVSWKRHVTQVQIVQFIFSLGLYAFYVYLHFTVDGGCKGFVPSIFSIVFNVSLLMEFTKIAAKRPTKDDKLQ* # ORIGINAL: g10407.t1 original gene structure, not modified by PASA NODE_1477_length_11051_cov_45.5036 AUGUSTUS gene 2 1122 . + . ID=g10407;Name=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS mRNA 2 1122 . + . ID=g10407.t1;Parent=g10407;Name=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS exon 2 183 . + . ID=g10407.t1.exon1;Parent=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS CDS 2 183 . + 2 ID=cds.g10407.t1;Parent=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS exon 472 714 . + . ID=g10407.t1.exon2;Parent=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS CDS 472 714 . + 0 ID=cds.g10407.t1;Parent=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS exon 871 1122 . + . ID=g10407.t1.exon3;Parent=g10407.t1 NODE_1477_length_11051_cov_45.5036 AUGUSTUS CDS 871 1122 . + 0 ID=cds.g10407.t1;Parent=g10407.t1 #PROT g10407.t1 g10407 PPPHTHAHKQVLKGLPTIEGRPGASMPPLDFDKVKATLQNTFAEAKIRDVDVMSSALYPKVFSEYMAFKQENGDVSCLPTRNYLAGMHVGEEIAFDIERGKTLSIRLKTVSDADAFGKREVYFELNGQARSVYVADKTNVKSQQGREKATKSNPGHVGAPMPGQVIALRVKAGQEVQKGDPLVVLSAMKMETVVTAPISGRIERLPTAVGDDVSGGDLVIEIVP* # ORIGINAL: g9525.t1 original gene structure, not modified by PASA NODE_373_length_25595_cov_41.1622 AUGUSTUS gene 1112 6536 . - . ID=g9525;Name=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS mRNA 1112 6536 . - . ID=g9525.t1;Parent=g9525;Name=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 5359 6536 . - . ID=g9525.t1.exon1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 5359 6536 . - 0 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 4701 5167 . - . ID=g9525.t1.exon2;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 4701 5167 . - 1 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 4317 4426 . - . ID=g9525.t1.exon3;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 4317 4426 . - 2 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 3983 4044 . - . ID=g9525.t1.exon4;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 3983 4044 . - 0 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 3620 3766 . - . ID=g9525.t1.exon5;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 3620 3766 . - 1 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 2262 3428 . - . ID=g9525.t1.exon6;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 2262 3428 . - 1 ID=cds.g9525.t1;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 1112 2078 . - . ID=g9525.t1.exon7;Parent=g9525.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 1112 2078 . - 1 ID=cds.g9525.t1;Parent=g9525.t1 #PROT g9525.t1 g9525 MLDETVGLHDTASQGSLAGDSPPFPLVQVLARDDDANADADNNRCGTTQSVPHNLTGTDEEPPFEQCRSQVVAAGSAAAPSRPAAMPAQSSVSPALPPGGCQMVSSVMAMILADIPQDSSLLSANCNSDDSHDNNANNHVACDHRSPSLLFDKDLQVAPANGSVSRTQPRAPPAHVASAACAPSTPSENPPAVQTLREAVDNRVDDDSAVPITVIDPSLTLQPHSEHISPRSRVVSHTANTYEPPNCATPALTAAPLAPRTASTAPASAPAPQLHDSTRGLCTAGVVAVADGSGSADAAAASTSATYPFHSRDGASIEAIDGAAQACRCLVVEDNEILQRVLGRWLSSLAIPFSQSYNGEEAVDAARKAKYDVIFMDLLMPVLNGTDATLMIRQGGLNTTTPIIAFSAASDGSHLREFGIDDFMQKPFAKSDFQHKISQWCGRSSLATHTAHTALTTASIASTSSDAASSDGIASVSDQGTSRSGFTSSRSNASISEGSLMALGEGDMSLSQLHSTSGPTNGGSAPGVLFDGVDGGGVFDSLQSGSITAAKTPPALAPQTFDIVDDLNTMFDSFAQTLCKRTPTEDGQLRVLVAEDDTLTRRVITSQLRKMGMHVDQACDGQQAVDLAENSPYDVILMDISMPRLSGVDATERIRASNSLNTDTPIIAFTSAADLSGLKAVGVDDCLSKPYSRSELAGVVGKWAPLFHDPSESDPATSATANATAAVHATTAGDQKACGSTPARSSVDGPPGNSQRKPVQIQRRASEEASSGDLKKAASFLYRAEKPAFTRGRGLSAGQLSSLPENHVLASELAPIPGSPSMRARSPARRAHTKQTDRSSSSGHSGGPHSTDILSIVHDVDGSDGEDAPLPASTAAATIDRRVSIGSPVSYWQQQQEIQAQREQRVASLSKSMSEGRIKRGSIGDSPASSSNEPSVWLPRGAANVSVPAHTAQPHSQPTSADLFERRLQQFAPIPPQPGRVLPTEGASGMSGVSAVTAGTAGGRVGASRAFGLPQGGTFVGQAIDGIRTSTPDLVASSGRSPSRRQSSNMRRASLEADPVASQARRELRRAVDDLRSLLPLPRPPAHASDNGQLVYVPNETDDIETIKSAALCIRELRSLFARPGACSAPYYPPQGEYAVPPGMVPQGYAFVGDGGSYSAYGDTMDGQAPYGGADPRDVVFMSPGVSVVKQHQQQQQPQLYFQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQPQQMHSQFPSTQQRSDVSVHAATHPLVVPASQSAQAVQLFPSPAGAHNKQGMVSDQSDSTNAGFFRPSQSQSSLPRPAVGDGCLFRPFPAAKPMTPAWPAYNGEPGGEWRAAVHGKRSSVFGQMPPARPQ* # PASA_UPDATE: g9526.t1, single gene model update, valid-1, status:[pasa:asmbl_6472,status:3], valid-1 # PASA_UPDATE: g9526.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6473,status:12], valid-1 NODE_373_length_25595_cov_41.1622 . gene 8786 11871 . - . ID=g9526;Name=g9526.t1 NODE_373_length_25595_cov_41.1622 . mRNA 8786 11871 . - . ID=g9526.t1;Parent=g9526;Name=g9526.t1 NODE_373_length_25595_cov_41.1622 . five_prime_UTR 11813 11871 . - . ID=g9526.t1.utr5p1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 11737 11871 . - . ID=g9526.t1.exon1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 11737 11812 . - 0 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 11376 11656 . - . ID=g9526.t1.exon2;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 11376 11656 . - 2 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 10877 10988 . - . ID=g9526.t1.exon3;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 10877 10988 . - 0 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 10574 10651 . - . ID=g9526.t1.exon4;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 10574 10651 . - 2 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 10254 10345 . - . ID=g9526.t1.exon5;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 10254 10345 . - 2 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 9755 9829 . - . ID=g9526.t1.exon6;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 9755 9829 . - 0 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 9487 9538 . - . ID=g9526.t1.exon7;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 9487 9538 . - 0 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . exon 8786 9043 . - . ID=g9526.t1.exon8;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . CDS 8889 9043 . - 2 ID=cds.g9526.t1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . three_prime_UTR 8786 8888 . - . ID=g9526.t1.utr3p1;Parent=g9526.t1 NODE_373_length_25595_cov_41.1622 . mRNA 9209 11871 . - . ID=g9526.t1.1.5b6be70b;Parent=g9526;Name=g9526.t1 NODE_373_length_25595_cov_41.1622 . five_prime_UTR 11813 11871 . - . ID=g9526.t1.1.5b6be70b.utr5p1;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 11737 11871 . - . ID=g9526.t1.1.5b6be70b.exon1;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 11737 11812 . - 0 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 11376 11656 . - . ID=g9526.t1.1.5b6be70b.exon2;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 11376 11656 . - 2 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 10877 10988 . - . ID=g9526.t1.1.5b6be70b.exon3;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 10877 10988 . - 0 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 10574 10651 . - . ID=g9526.t1.1.5b6be70b.exon4;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 10574 10651 . - 2 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 10254 10345 . - . ID=g9526.t1.1.5b6be70b.exon5;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 10254 10345 . - 2 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 9755 9829 . - . ID=g9526.t1.1.5b6be70b.exon6;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 9755 9829 . - 0 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . exon 9209 9538 . - . ID=g9526.t1.1.5b6be70b.exon7;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . CDS 9374 9538 . - 0 ID=cds.g9526.t1.1.5b6be70b;Parent=g9526.t1.1.5b6be70b NODE_373_length_25595_cov_41.1622 . three_prime_UTR 9209 9373 . - . ID=g9526.t1.1.5b6be70b.utr3p1;Parent=g9526.t1.1.5b6be70b #PROT g9526.t1 g9526 MASSKVLSRKLQALDYPRYDAYDPAGIMSHLHLATVMPVFVSLMFSLLSVRVVSGSWHDLHTHTQIQRTQTHTHTHTDDRQFRDMVIWLEDTKIRAYKIEQRGPLKNIGAVTWATALADYLGELKCPKHSFSTPAERIALCDWLLGYAIQLEYADEAGKYNGQQTVSEPSGAVGSVGPLVIDYASPEFHSELCKVAETLALPVVDVDTATLLKAVAFFVENKLLADAIEVAKIQSTDKSKMAINLERETAGIDTGDATLNKAVAILRLLHMAELRDLQTKINEAIVAVQAITANPKTDSSLGQTGR* #PROT g9526.t1.1.5b6be70b g9526 MASSKVLSRKLQALDYPRYDAYDPAGIMSHLHLATVMPVFVSLMFSLLSVRVVSGSWHDLHTHTQIQRTQTHTHTHTDDRQFRDMVIWLEDTKIRAYKIEQRGPLKNIGAVTWATALADYLGELKCPKHSFSTPAERIALCDWLLGYAIQLEYADEAGKYNGQQTVSEPSGAVGSVGPLVIDYASPEFHSELCKVAETLALPVVDVDTATLLKAVAFFVENKLLADAIEVAKIQSTDKSKMAINLERETAGIDTGGGSVVWMETEIACFFCSLEILCAPENVCIVVWCVCGC* # ORIGINAL: g9527.t1 original gene structure, not modified by PASA NODE_373_length_25595_cov_41.1622 AUGUSTUS gene 12349 16174 . + . ID=g9527;Name=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS mRNA 12349 16174 . + . ID=g9527.t1;Parent=g9527;Name=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 12349 12641 . + . ID=g9527.t1.exon1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 12349 12641 . + 0 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 12778 13173 . + . ID=g9527.t1.exon2;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 12778 13173 . + 1 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 13359 13462 . + . ID=g9527.t1.exon3;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 13359 13462 . + 1 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 13709 13916 . + . ID=g9527.t1.exon4;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 13709 13916 . + 2 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 14447 14799 . + . ID=g9527.t1.exon5;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 14447 14799 . + 1 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 14974 15305 . + . ID=g9527.t1.exon6;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 14974 15305 . + 2 ID=cds.g9527.t1;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 15932 16174 . + . ID=g9527.t1.exon7;Parent=g9527.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 15932 16174 . + 0 ID=cds.g9527.t1;Parent=g9527.t1 #PROT g9527.t1 g9527 MDETRALLEEDAALYSQPSFIRTRSQPTRNQRTSEDFIAAIETVDLSFRDISCEVDLPSGRFFSCAPAGKKRILSGVSGHAASGSFLAILGPSGSGKSTEHVAAHASLNGFCRSLIDILSGRKTVGDITGALFVNGTAVDHHSMKAISGYVSQDDVLLPTFTIRETFRFAADLRLPRSISDHDRALIVETTIQDLRLSHVADTRVGGAFVRGISGGEKRRVSIGVEILTSPSILFLDEPTSGLDANAALVITDVLKDLAVKKKTAVICCIHQPRSSIYEKFDQLMVLAEGRLVYAGERTRAEAYFEGLGYPCPHGWNAADFILDLVALQFERSRGASLSVDQLADHYAESDTHASLLASLPAKKSASINSSGDLVTHAFMKRGYAVGFFQQVSVLTRRNATHTARHPLLAAQQIAGYIFSGVLIGLLFSQLRESKFEQLTLGLSFMMDVFAVFSFFAVPTYIENRLNFNREQSAKYYSPLAYFIANFAILLPFASAVASLYMFIIYRLQGWNGSFGFALLVGVLCLQVFLALNELIGAALRSVDVALGIAGFLNLIAMVFSGYPNIPVYLRWLYWLTPMSYAQSAILLNEFGGYPEGEQYLDVFGSPLRHRQWDAVYALIGFLVLYRGLCYFALRYLQKEKR* # PASA_UPDATE: g9528.t1, single gene model update, valid-1, status:[pasa:asmbl_6471,status:12], valid-1 NODE_373_length_25595_cov_41.1622 . gene 17898 21456 . + . ID=g9528;Name=g9528.t1 NODE_373_length_25595_cov_41.1622 . mRNA 17898 21456 . + . ID=g9528.t1;Parent=g9528;Name=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 17898 18079 . + . ID=g9528.t1.exon1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 17898 18079 . + 0 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 18282 18364 . + . ID=g9528.t1.exon2;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 18282 18364 . + 1 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 18577 18662 . + . ID=g9528.t1.exon3;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 18577 18662 . + 2 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 19045 19956 . + . ID=g9528.t1.exon4;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 19045 19956 . + 0 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 20118 20325 . + . ID=g9528.t1.exon5;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 20118 20325 . + 0 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 20620 20745 . + . ID=g9528.t1.exon6;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 20620 20745 . + 2 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . exon 21010 21456 . + . ID=g9528.t1.exon7;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . CDS 21010 21311 . + 2 ID=cds.g9528.t1;Parent=g9528.t1 NODE_373_length_25595_cov_41.1622 . three_prime_UTR 21312 21456 . + . ID=g9528.t1.utr3p1;Parent=g9528.t1 #PROT g9528.t1 g9528 MTGTDCNTSHSDSTDSPGSAPSVGSGAHTVGDRHSPGDDDNHRADSRDCFAKKTFLEKLVKIMNDTNNASIICWSACGRRVVVHNPDLLASRVLVRYFRHENSASFVRQMNMYGFRKHVTTGTGRWEFSHASFIRGRSDLVSKVIRRNRHRQQSTPTAQPSTQTRRATESPSCAPTGCTSAQTVPVSTRDTSGDVTHWQESRDSSFSSTGCTDTSAAQAVPSSQLSDSGSRASTRTVGVASSCAGSFDKTSGLMIAREDDVMANAAAQSDSLQFLQYPQLNTYASADNGTRLLPLPNAAIQYQFDGAPLEHYSHVVRLSGLSGLSGQAAPGGHSVPDPAPTAAMGLGDAVCDSEFDSACFAGSDGLFGESGDAMLTDDALDRMIRSAMSMDTESGSATSGAAVYASTADRTGDDINSTAFFGQVALNRSHDCGIMADEMLVDRNTYRNAEAQSVRLWSIDPIDGASVCHGGDYSATAPLIKRECVSPRLISATGLDRNVPRAGPAGAVDYQMPLKASQRRSTSDGDSDKRLAVRSRAQNVSPFVNAQSRSEHKNTRVPVTSQLRPGPVFTGSANGGSMRAGQRFPVGVQLPRFSVPAFKNGLPANIDIREVLSGKTGIPVHIHRGHTNAQGS* # ORIGINAL: g9529.t1 original gene structure, not modified by PASA NODE_373_length_25595_cov_41.1622 AUGUSTUS gene 21737 23875 . - . ID=g9529;Name=g9529.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS mRNA 21737 23875 . - . ID=g9529.t1;Parent=g9529;Name=g9529.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS exon 21737 23875 . - . ID=g9529.t1.exon1;Parent=g9529.t1 NODE_373_length_25595_cov_41.1622 AUGUSTUS CDS 21737 23875 . - 0 ID=cds.g9529.t1;Parent=g9529.t1 #PROT g9529.t1 g9529 MSAPASHPPRPSALSMQADAAAGEGQWRVRGALAHPADNVSEWLGRGHYEHQGYGAAGDNAYTHPHGGPWTRGPHDHRQASADGSGIQNSAHRRNANATAVAAAESEREILVRQLERELQRVIVAMGSEKTAQNERASELVHELRIARAQRDALSAADANRQQKLHVLESELASAVGTLERERRAWAERTARMEAETAEARAAAEAGRSSLANKSDEVVALKRRLAAEERSRATLQEQLNAEAAAAAANAEAHRRSVDQLSAALRAAESSAEGLRAELSTATERGALLERQAAGLELARQQLEGQLHAADVAASERLKAASQRVSEEWETRMKHVAAEHEAALARAERGKDAAVADTEERLRRHVRSLEDRIAHLTRERDDAHGRLQQSSSALMSRVDRIGVIGRASVDMAASLREMLGHHYEDAVRVLARLTGELRTLSADATTASIGSAQPLASAGIVNGGSGAGSNAASANTTPIKHTTTHKQRGAFSPSSGPFTDRALNIARTSLSPPDDRATGIQANTNRLGADAYHGAAKSGSSPVTAARPPLATGRADLPRALFGPSHTTALSSVSHHDAFEFEMDARARRRDNFDASMDVGELRVGGLRAADSTSGARLPANREGKHGGSLSSSSTMSTHSRSVASEIGGTKSAAHGPLRAGEAVSDRRRYVEPSSSVADGVQGRGRGVIVSAKRKTAAATAVASASSRPGLWR* # PASA_UPDATE: g2654.t1, single gene model update, valid-1, status:[pasa:asmbl_821,status:12], valid-1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . gene 522 2093 . - . ID=g2654;Name=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . mRNA 522 2093 . - . ID=g2654.t1;Parent=g2654;Name=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . five_prime_UTR 1963 2093 . - . ID=g2654.t1.utr5p1;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . exon 1608 2093 . - . ID=g2654.t1.exon1;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . CDS 1608 1962 . - 0 ID=cds.g2654.t1;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . exon 1107 1213 . - . ID=g2654.t1.exon2;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . CDS 1107 1213 . - 2 ID=cds.g2654.t1;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . exon 522 683 . - . ID=g2654.t1.exon3;Parent=g2654.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant . CDS 522 683 . - 0 ID=cds.g2654.t1;Parent=g2654.t1 #PROT g2654.t1 g2654 MHTNARTFVLLAVVSLAVASVARAEECPSPDAGSALADITSYGQYTEALLTSQQSSVKSVVDALNAVSREVQSILTAYVATEVSRTSACAALTTSIYGAASKVETRVTKAVATLLNSPACLSCDCRDALPGSYGGESVAVRTSASANECGDACNADARCNSWTYAIGGPYAGRCRLLRLTDPTFAQRIHFSVDFAGKVSEYRLSIAR* # ORIGINAL: g2656.t1 original gene structure, not modified by PASA NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS gene 8953 10300 . - . ID=g2656;Name=g2656.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS mRNA 8953 10300 . - . ID=g2656.t1;Parent=g2656;Name=g2656.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 9799 10300 . - . ID=g2656.t1.exon1;Parent=g2656.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 9799 10300 . - 0 ID=cds.g2656.t1;Parent=g2656.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 8953 9578 . - . ID=g2656.t1.exon2;Parent=g2656.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 8953 9578 . - 2 ID=cds.g2656.t1;Parent=g2656.t1 #PROT g2656.t1 g2656 MASVSWLWISLAAIQLIAPLVIADVNIMRMSTVFVTGYSCQIGQTCTRPELAYDGLTGLNHIWNAGTQACNNYITVQAAFGARRFVTAIKVTFGTNPPNSVGLQVNVPSGGWFNAFYPVSPAPVVLSPFYKTLDAPMESIGARITFPSLKVIAGKCSLAVEEIELYVDEEDCGLPACVVDCVQSPWSVWSECSAPCGSTSIATRTRTTLVSPTVDGRQCGPTDESTVCAPPCPSVLPASINSSTGADTKALAFDGNPTTVWESGLFACSGGANVGADWKAARAGGIWLSRVGFVNTMVNNASLLLDILGVDGLWVASGLSAVLHYDEDVVRRNISGSFVLSPPVRALGARLVFTLLRGDCSASVAELSFVEGNFL* # ORIGINAL: g2655.t1 original gene structure, not modified by PASA NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS gene 2699 8617 . - . ID=g2655;Name=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS mRNA 2699 8617 . - . ID=g2655.t1;Parent=g2655;Name=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 5473 8617 . - . ID=g2655.t1.exon1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 5473 8617 . - 0 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 4735 5027 . - . ID=g2655.t1.exon2;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 4735 5027 . - 2 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 4475 4628 . - . ID=g2655.t1.exon3;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 4475 4628 . - 0 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 4100 4371 . - . ID=g2655.t1.exon4;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 4100 4371 . - 2 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 3874 3947 . - . ID=g2655.t1.exon5;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 3874 3947 . - 0 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 3182 3709 . - . ID=g2655.t1.exon6;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 3182 3709 . - 1 ID=cds.g2655.t1;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS exon 2699 3047 . - . ID=g2655.t1.exon7;Parent=g2655.t1 NODE_1211_length_12983_cov_42.1704_potentialcontaminant AUGUSTUS CDS 2699 3047 . - 1 ID=cds.g2655.t1;Parent=g2655.t1 #PROT g2655.t1 g2655 MYDTLACITTDCPLFVAPSSSPPSVLADGSRERPFPRLVDALAAAFNDTTIILLPGTHVIAPGTVNVMLASVVIASLSSQLEDSGRPVITCKSPPDSVTASPLVSLSPGAKRLTLQGIDFVGCNASALWSFADDTDIQIYGCRFALFDSRLSSVIDVVGQNVRVNISDCAFESNAACMTAGVRVSTSNGSLTLARTTFLRNVMYDPTESAECMQLFVDRSGESGSEYLGGTAVSMRGEYALLTVSDCHFDANGDGNVNIWLPDTSPIPAGGAICAQGAICELVNCTFSDNVIGGYGGAVFLGCKAASIIDSRFMRNAASGGGGGLAVVSPDTDENVSVLLERSSFQYNGFAQHSFHDLLLGGAVYIYVSSESLMAVVPFSLRISYCEFANNGGALRGGSLGEHGGALYVYTPRNLNGTPVVVEGTLFRGNHVTKKGGAVFIHAVNATLTTCTFIDNGSVYGYLSAEYGGGGLFADWTDFDAYTSFSVIDCNFTGNSADSVGGAAHFRVTLKLWLIRTHFGSNSAASGGSIAFMPGQSSIHPNDVVIVNCSFTGNIAATGSSTIDLLGHGRGGAVLIQSRIWVWDTFGGMMVHIDQSNFDNNTAAVGGAIALFDFFDPLAYPSLITMYISQSEFRANHATESGGAISMEGRLIANVTHSLFSDNHAPAGGAVFVATARMPRPVVFGACFFQRLVVKSGGVTGGHFHLGADSTVEIYDGVVSMGSAEIGGCFFVGERASVSIWLSNLSNCSAKHGGGFAAFDSSSLFMYDTAASDAVAQLGGWIYAMGQSEVSAVGIALLRGAADYGGCLYLCGSVNVTVESSTFTHCISSGDGGALSLNDDATVSFFDAHLLQGLSTNGLGGCLACQDRAAVDMIRTTLSGCASPSSDGGSIATKADCILRLRDTAVRNSVAFSFGGGVLLSSSHPAFFDNVTAVGNMASVGGFLCMDSLQALNMSNSYLSDNSAVGDGGAIAVMGRSSLTLSRLAIMSNSAGDRGGGIVLVAHGRLFASHSIVGGNQALLGGGLSHHDSSALKLVRVTLVNNFVQTYGDNRAGGAAAGDGCGGGIAARFRGHSVNNLDIVDSVITGNNALSGGGIYSLEASFPFEPSVNALKLTLSMNKRYDGANSDYSSRPIDLSLSKDSPKLLRVESGATLPGVTAFILDAYENVTLVDSQGTVVLEAQVVDQAFGAPSARALVLGLIRVTVDNGLAHFNDVQVVGSPGHYYVRLLSSTYLYRNRLNITIPLEIVPCSGARGLVTSTSSSLARINGLSSRDAMTCADPDCASGCVKGVCTFQNYNGELSSTSVCHCFTGWSGATCNVPVLFMIVAVCLFVVVGAGLLFAFRFRLRLLRYALEFHKAVSHNSKRRLLIHVAQCFVSIALEAVDMGTDLVSFAQLLARPKDEQHGVLAAYTAFVSLALTASLVSLCAHIITVADLCAQHKLGVRQRDGDADERTPVLEKLTRARRKLRLLIPMLLLVVLEDVPFAALNGYILSEDARMLSSFHLSFFVSIVFGCFMVGVKIGKVGTLFRLYTKCKALEQDLRKMDGFHACEANEISMQTTSSLGLVKAYEVAGEIEMTDSPVAGRHVQHLASADRFDDVLSSSA* # PASA_UPDATE: g1146.t1, single gene model update, valid-1, status:[pasa:asmbl_6464,status:12], valid-1 NODE_3732_length_2875_cov_42.855 . gene 238 1540 . - . ID=g1146;Name=g1146.t1 NODE_3732_length_2875_cov_42.855 . mRNA 238 1540 . - . ID=g1146.t1;Parent=g1146;Name=g1146.t1 NODE_3732_length_2875_cov_42.855 . five_prime_UTR 1371 1540 . - . ID=g1146.t1.utr5p1;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . exon 1262 1540 . - . ID=g1146.t1.exon1;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . CDS 1262 1370 . - 0 ID=cds.g1146.t1;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . exon 997 1083 . - . ID=g1146.t1.exon2;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . CDS 997 1083 . - 2 ID=cds.g1146.t1;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . exon 238 591 . - . ID=g1146.t1.exon3;Parent=g1146.t1 NODE_3732_length_2875_cov_42.855 . CDS 238 591 . - 2 ID=cds.g1146.t1;Parent=g1146.t1;3_prime_partial=true #PROT g1146.t1 g1146 MALDTVQNWFSGIFDSNRGLATGEDGSKVVLVTGGAGFIGSHTVVELLESNYQVVIVDNLNNSCEESVRRVEKITGKRVAFYNVDIREKAPLARIFANHKVFAVIHFAGLKAVGESSKIPIEYYHNNITGTLILLEVMKEAGVKRLVFSSSATVYGVPQKLPLDEEHPLSATNPYGRTKLFIE # PASA_UPDATE: g12809.t1, single gene model update, valid-1, status:[pasa:asmbl_7950,status:12], valid-1 NODE_5230_length_960_cov_34.5141 . gene 179 691 . - . ID=g12809;Name=g12809.t1 NODE_5230_length_960_cov_34.5141 . mRNA 179 691 . - . ID=g12809.t1;Parent=g12809;Name=g12809.t1 NODE_5230_length_960_cov_34.5141 . five_prime_UTR 645 691 . - . ID=g12809.t1.utr5p1;Parent=g12809.t1 NODE_5230_length_960_cov_34.5141 . five_prime_UTR 380 391 . - . ID=g12809.t1.utr5p2;Parent=g12809.t1 NODE_5230_length_960_cov_34.5141 . exon 645 691 . - . ID=g12809.t1.exon1;Parent=g12809.t1 NODE_5230_length_960_cov_34.5141 . exon 179 391 . - . ID=g12809.t1.exon2;Parent=g12809.t1 NODE_5230_length_960_cov_34.5141 . CDS 179 379 . - 0 ID=cds.g12809.t1;Parent=g12809.t1;3_prime_partial=true #PROT g12809.t1 g12809 MFAITRVAAAAAGLRTVALRQNAVVVSARKYARAATPVTRVIERIEAKRQESLLGGGVDRIKQQHKK # PASA_UPDATE: g12188.t1, single gene model update, valid-1, status:[pasa:asmbl_6631,status:12], valid-1 NODE_3839_length_2647_cov_39.4514 . gene 87 1352 . + . ID=g12188;Name=g12188.t1 NODE_3839_length_2647_cov_39.4514 . mRNA 87 1352 . + . ID=g12188.t1;Parent=g12188;Name=g12188.t1 NODE_3839_length_2647_cov_39.4514 . exon 87 1352 . + . ID=g12188.t1.exon1;Parent=g12188.t1 NODE_3839_length_2647_cov_39.4514 . CDS 87 1292 . + 0 ID=cds.g12188.t1;Parent=g12188.t1;5_prime_partial=true NODE_3839_length_2647_cov_39.4514 . three_prime_UTR 1293 1352 . + . ID=g12188.t1.utr3p1;Parent=g12188.t1 #PROT g12188.t1 g12188 VDSCPKGAAFDVLTEGHFRPILIALGYRVPDGCGRLVTYIYPVFVGLLVSWTFLGWVCNSIVLAAHLDFPCLPGWYEIGLSQSLHTLIGLLLSTIPVASFIVGHYVHRRSAHLRDLAKNVCWCPAETECLQRTVRQWRIIVPVYSIVTASIFVSLNLVSGLVITNRFGGKSVFELSIDTIVTFTAFAYQNATIGAMVAYFVMSCELHMMELNRILVRVAQGEYRPEKIIPMHLDLKRSISWTSTKLQGYITYVSNVAALALFIQAALFVFRTETSEMRGWVFSAIFLLPVVFLLVKASTLTSAVQKVPSRINNIIVNANYCDGILGDNTPEDENGLPLAYAPCPTMEGLSRLNSYFTVWVLGGRYIGFTIFTVTITPALLARLAYGLASLLFVLISYHFRK* # ORIGINAL: g2874.t1 original gene structure, not modified by PASA NODE_4566_length_1456_cov_31.8573_potentialcontaminant AUGUSTUS gene 1 1456 . - . ID=g2874;Name=g2874.t1 NODE_4566_length_1456_cov_31.8573_potentialcontaminant AUGUSTUS mRNA 1 1456 . - . ID=g2874.t1;Parent=g2874;Name=g2874.t1 NODE_4566_length_1456_cov_31.8573_potentialcontaminant AUGUSTUS exon 1 1456 . - . ID=g2874.t1.exon1;Parent=g2874.t1 NODE_4566_length_1456_cov_31.8573_potentialcontaminant AUGUSTUS CDS 1 1456 . - 1 ID=cds.g2874.t1;Parent=g2874.t1 #PROT g2874.t1 g2874 TSTSAADGNGGVGAATSTPAVDAVASSSSVVFGVATSTPVANAVASSSSAVVDGDATSTPAVDAVALSLSAVAVDATSTPAADVVASSSSFVAGDATSTPAADAIASSSSVVVAGHATSTPVADAVASSSYVVAGVASSTPAADGNGGVGAATSTPGADEVASSSSAVVAGVATSTPAVDEVASSSSVVADDATSTLGADAVASSSSVVAGAATSTSAADAVASSSSVVAGDATSTPAVDEVASSSSVVVGVATSTPAADDVASSSSAVVAGVSTSTPAADTVASSSSVVAGHATSTTAADEVDEVASSSSVVAGAATSTPASDGNGGADAATSTSGADAVASPSSVVAGDATSTRAAHEVASSSSVVAGDSTSTTGADGVASSSSVVAGDATSTPAVDAVASSTSTVLAGDATSTPAVDAVASSSSVVARFATSTPATDGNGGAGAVTSTTGADGVASSSSVVAGDATSTPAADAVASSSSAVV # ORIGINAL: g4053.t1 original gene structure, not modified by PASA NODE_999_length_14921_cov_45.9068 AUGUSTUS gene 531 3230 . + . ID=g4053;Name=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS mRNA 531 3230 . + . ID=g4053.t1;Parent=g4053;Name=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 531 698 . + . ID=g4053.t1.exon1;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 531 698 . + 0 ID=cds.g4053.t1;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 1220 1327 . + . ID=g4053.t1.exon2;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 1220 1327 . + 0 ID=cds.g4053.t1;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 1670 2572 . + . ID=g4053.t1.exon3;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 1670 2572 . + 0 ID=cds.g4053.t1;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 2808 3230 . + . ID=g4053.t1.exon4;Parent=g4053.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 2808 3230 . + 0 ID=cds.g4053.t1;Parent=g4053.t1 #PROT g4053.t1 g4053 MLRDRWLAVNELFPEWRVWEQFIVNEFQRGMTLDSLLSSHPVEVEIPSSNQVDEIFDAISYAKGAAVIRMLVAYLDEDVFRRGIRLYIQRHKYANAATGDLWASLSDVSGRDVRALMEAWTRQTGYPVVTVSQAGGSLQVSQARYLGSGAESVRDDSTWIVPLQLSSGAFPGIRDEVLSAQSGSFAVPGDAAAWIKVNTGQTGFYRVRYTADLLARLAAVLPSLPASDRVGLVNDAFSLACAGYASTTGALTLLSHLGAESEYVVWADVAANIKALLAVWQRQPEDIVRRLRTFARSVFAPIATSLGWDVPASESHLSKLLRPIALGYAGRLGHVAILAEGRERFVRYAAGDATALHADVRAPAIAMTLAHGGRAEFDTAIALFKKAESQDLRITILSALGASGDSSLVLEALAFAFSDSVRDQDAYLIVASAASNAAGRRATWDYIRENWALIHSRYPHGSMLLGRLVTIGLEFLSSLAEADEVERFFREKNVTAISRSVDQTVEKIRSNAKWVDRDAAAVAEWLFANVKDE* # ORIGINAL: g4055.t1 original gene structure, not modified by PASA NODE_999_length_14921_cov_45.9068 AUGUSTUS gene 6530 7210 . + . ID=g4055;Name=g4055.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS mRNA 6530 7210 . + . ID=g4055.t1;Parent=g4055;Name=g4055.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 6530 7210 . + . ID=g4055.t1.exon1;Parent=g4055.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 6530 7210 . + 0 ID=cds.g4055.t1;Parent=g4055.t1 #PROT g4055.t1 g4055 MFENHRAANGWRRAMFFFTILLDPRITAVRTHRRQHNTDPALSCNRHVVVCVFSEVTQRPVTLPLDTRMETVHSHRHRQHRTDPAHLYDRHVVVRVHAEVTRRPASSLLDARITTVRTHRTHRNQRLSRALDLCNSFGAESFQLKLDFKKLPSTNVRRLNRIQCNLFDSMYLKVVDDVMRGPGQNVDGDVVVDDLASVWKIKLRRRDVRREVHVQNNGAPSVAQRL* # ORIGINAL: g4054.t1 original gene structure, not modified by PASA NODE_999_length_14921_cov_45.9068 AUGUSTUS gene 4673 5941 . - . ID=g4054;Name=g4054.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS mRNA 4673 5941 . - . ID=g4054.t1;Parent=g4054;Name=g4054.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 5630 5941 . - . ID=g4054.t1.exon1;Parent=g4054.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 5630 5941 . - 0 ID=cds.g4054.t1;Parent=g4054.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 4673 5398 . - . ID=g4054.t1.exon2;Parent=g4054.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 4673 5398 . - 0 ID=cds.g4054.t1;Parent=g4054.t1 #PROT g4054.t1 g4054 MAGVAVFHKRDSKLKGKSPDASRPDSQDSPQKRKRLDPTADETSTDAHIGEDDSPECDSSGQNFWSKSVNATANEQSVLSPRATEQGIVLFLFSSSESAQSSNETNGGVRVLVPPGITASDSRVVVGILAKDESAAHLFNAAVNATLGIRFVTCKIDDVQESEAADSDNDDDAPAPVSDALDGVVIKEQPERPSGLSHLPESTKPRSEKIFPLQKCLGDLLFDRIAYILSAKGTPLQQFERLVFRVMTANAMTLETQTADRLKEIKIFLTPTKWRDSHVLRERGDGADTPYFKDVSGVDRMVYSVQIEQRMHNFYAQLINDKFTLGLLVVDECHYAAIANQAYDV* # ORIGINAL: g4056.t1 original gene structure, not modified by PASA NODE_999_length_14921_cov_45.9068 AUGUSTUS gene 8825 14759 . + . ID=g4056;Name=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS mRNA 8825 14759 . + . ID=g4056.t1;Parent=g4056;Name=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 8825 12397 . + . ID=g4056.t1.exon1;Parent=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 8825 12397 . + 0 ID=cds.g4056.t1;Parent=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 12576 13367 . + . ID=g4056.t1.exon2;Parent=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 12576 13367 . + 0 ID=cds.g4056.t1;Parent=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS exon 13977 14759 . + . ID=g4056.t1.exon3;Parent=g4056.t1 NODE_999_length_14921_cov_45.9068 AUGUSTUS CDS 13977 14759 . + 0 ID=cds.g4056.t1;Parent=g4056.t1 #PROT g4056.t1 g4056 MSKMMMTPEEISHTLRGIAEEDSYEQFFRFCEDAPRFVRVKVGGVRMTTRENPMRVLQAMLKIAVFQTYYQYELGAPCKVEGRRFPLAHDEREEAVRWWLGARPLIRITRRIISAVMMDKLADKDESVASASNAIARLLKKLSPKKCGLVFWVLAEVIAFAVLEPYNLDAASEESFEGTAHYAFDTHERVEEAVRSVLTGINDGMLARLVLAALSGVLIAGNEPQIQNKALLLSDYVDTAEYETNPVSLVSALIDMGAADAGVESLSNALGKTVHRAAAKGGKRTSQTTLEIAHDLLNRGATLTMVKAGELKDALHEWGSFLQPTGHIAPLVALFRQQLGNSRPDVNDAYDTIVRILDAALRARAVDNDSESSVRLLEDEEPDNDQETREDDDDGTGSSRPVSPGGETASSLSMQPQELTPASPTVDNGKGKSADSPRRDSHCHSPRHSPRRDGPSQWTSATPIVIPCRNVDTTLDASWFEDFIKLLRGIDENKRNGTQNYAERRKLLEYSGIMCTRGIWKEFMEALLAAKVEPSDLDALLNAPADERENVMDAIISKRVPASRPPNKNVDGQSDSESDDGPDDSMDGFLVNDEQKGPDSPYDPNLHKDSGRERDRRVHAFGTDPDAHRGPSDVHMSSANEVQPSTFEGNMDEFEVPEMDVDVRIRTGAAQVTTATKSPTMQDGGEDVQQANNGQHNEESENGEWEDSDSIDRNDAVYDNDSNRGPEDDGAAPRDYLNCSVQRAPISGAIPVFADNHPDDEFGKAYFTASAVQKMWDVVYSAEAKHQRGTPAGGFASLINAVEKEVVTAIREKVASSPPEARFLDEYKRCVNLIRHVIDGEGVFHGYKSARWPSFMQALTAVRVKEHKMVGNFSSPGAGKTEAALLTCRYLHKDVGSSLYLIICPNAGGRLPAQWKEEILKPYAGSANPPRIQLRPKRGDLERMAASQCPSGDTFIIMNHEKMQKTRVFNYLDALLDAWHTAGVSLRAIVLDEAHSVKDAAALRSIHIRRLIANARGRKGADIRVLAMTGTPVVTDPQEGVTILDAMGLCVSVQSNEMVAACVDLHSQITANWSVRQEVTYGCSLDEKFVNVPFPERFHEMLEKICTDWKTLPKNQLALEYVFTHARLDSCVVPEVVANMNKSPKEKTLIYSEFIGGELNTEEDATILKLLVDTLSYKTGAKVGTFTGQSTIDQRADVIKDFTSGDCDVLVASKAISTGINGLQGVCGTLVFNILPKTAADYQQVVGRLYRHGQSKDKVRVVIPLVHGEAGVHVSHGMHNWRRITERQTLLKLVLDGVFNGDEDDLPDDDRQNKATLAWIIREHKKWKKGLQPPALDADDGADKSDNNNNQESSDNSEEPAPAPGGVPGSQHMHMGPMASYHTRYNNMHSGDLHKHFIDNPREWQEYHQLYAQQRQNWSVVPFQVIGDRIHACARETGWKVTVADLGCGTRELYKHLKKTLSMSLLRFLSVDHVLEADAHVTDNPDEANVRCDVSSLLDRPEANEFVGKCHFSIFSLSLMGNNIAAYIRVAHALTAHHGGLLVIAEALSRFGYDNETQERNIRAFRSTLKRLGFVTIDSDVRAALSASIRNAPPEDEMWDFVVCGNPKFVFMTFQKRGPDAGARDVVLRLRDQSGQSPSDDSDRDHVSIAEGDDDDIDADWDTSGEMEPAIIRRTDSAAMSRAKSGKRRCAQQRDAERDDCDGESYRKQKRARNY* # PASA_UPDATE: g12077.t1, single gene model update, valid-1, status:[pasa:asmbl_6870,status:12], valid-1 NODE_4024_length_2321_cov_21.8473 . gene 69 1908 . - . ID=g12077;Name=g12077.t1 NODE_4024_length_2321_cov_21.8473 . mRNA 69 1908 . - . ID=g12077.t1;Parent=g12077;Name=g12077.t1 NODE_4024_length_2321_cov_21.8473 . exon 1800 1908 . - . ID=g12077.t1.exon1;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 1800 1908 . - 0 ID=cds.g12077.t1;Parent=g12077.t1;5_prime_partial=true NODE_4024_length_2321_cov_21.8473 . exon 1457 1546 . - . ID=g12077.t1.exon2;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 1457 1546 . - 2 ID=cds.g12077.t1;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . exon 1109 1166 . - . ID=g12077.t1.exon3;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 1109 1166 . - 2 ID=cds.g12077.t1;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . exon 804 892 . - . ID=g12077.t1.exon4;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 804 892 . - 1 ID=cds.g12077.t1;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . exon 589 690 . - . ID=g12077.t1.exon5;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 589 690 . - 2 ID=cds.g12077.t1;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . exon 69 158 . - . ID=g12077.t1.exon6;Parent=g12077.t1 NODE_4024_length_2321_cov_21.8473 . CDS 69 158 . - 2 ID=cds.g12077.t1;Parent=g12077.t1;3_prime_partial=true #PROT g12077.t1 g12077 ECQCKNGTCDGGISAKANGTCVGACKPGAYGELCDKACTCQNGVCNRTTGKCDSCVKNFYGPLCDQQCAKNRACACKDGIAGDGTCNLCTTPKQNFDASIACNDCLPIYYGVNCTKNCSCVNGVSNSGINGTGNCTSCNPKYFGQNCDQNAACQNGTPRMTDGVCTECMDGYFGPTCND # PASA_UPDATE: g3219.t1, single gene model update, valid-1, status:[pasa:asmbl_6713,status:12], valid-1 NODE_3908_length_2534_cov_51.079 . gene 326 1988 . + . ID=g3219;Name=g3219.t1 NODE_3908_length_2534_cov_51.079 . mRNA 326 1988 . + . ID=g3219.t1;Parent=g3219;Name=g3219.t1 NODE_3908_length_2534_cov_51.079 . five_prime_UTR 326 326 . + . ID=g3219.t1.utr5p1;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . exon 326 453 . + . ID=g3219.t1.exon1;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . CDS 327 453 . + 0 ID=cds.g3219.t1;Parent=g3219.t1;5_prime_partial=true NODE_3908_length_2534_cov_51.079 . exon 638 980 . + . ID=g3219.t1.exon2;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . CDS 638 980 . + 2 ID=cds.g3219.t1;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . exon 1362 1988 . + . ID=g3219.t1.exon3;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . CDS 1362 1518 . + 1 ID=cds.g3219.t1;Parent=g3219.t1 NODE_3908_length_2534_cov_51.079 . three_prime_UTR 1519 1988 . + . ID=g3219.t1.utr3p1;Parent=g3219.t1 #PROT g3219.t1 g3219 GRTVSRGKDNNFHATSRSASPGDSQKKLALTAADENSPYYSPGRRKFDGQHRTASDLLAWDAPVLEPRPRVNPPANVGRRAPARPVFLSSPFAITEVPPSSGVREGSRLGLLSSSGSGQQHVRSGSAQASEKGPYWYMQEEEQEEAKKPFGRKNILMEECFGIHSRSTPSRTTSGHPMRNATSANSPFAPQPRSRVSSAGRMGFSEKI* # ORIGINAL: g5665.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 24608 26287 . + . ID=g5665;Name=g5665.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 24608 26287 . + . ID=g5665.t1;Parent=g5665;Name=g5665.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 24608 26287 . + . ID=g5665.t1.exon1;Parent=g5665.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 24608 26287 . + 0 ID=cds.g5665.t1;Parent=g5665.t1 #PROT g5665.t1 g5665 MAAHTVEGVASVRNDNDVLINVRESVGDSNYDPDGITDTLQVSKSQDFSDSDSSSESDDEEDADVVPIMLPEVGAQLRAAGRRASASGIIRDGETAKVLAKAVVAGIVPLPAPPAAAVARSNVALRADCPTRLAKFDDVYNFRDIGGFHTLDGRTLKSGMLFRSSRPDAASEIDIHLLSKVHGVRTIVDLRALEETASLTNTHAGRVDLLYQSTIVEVNPRKRRHFIRRILGTGRRGSRSNAALDAGAAGPSGHQHSHTPHEHAPHEHRQHTTTTSSGGASRSHIFSPKGYSPLEVSASVDSLPSTSRPAGHVPIDHVSVSVSEPVVAPDAPLLRRVRVGFIGRNFMRNAMWSAMPWTMKIAVVFRKLFDIIFRTNYAKALVITRLINPRGIKGQYRDFVDFCKMEIVCVLRFIADASSLPVLVHCAHGKDRTGIVLAMTLACLGVSDEDIALDYGLSETGLGRIRDKVHAEIVSDHGLAEEFAHADPDTMRATLKYVRQKYGSVRQYLTGAGFNDDDQDRLRCLLLESQEAHEGFVVTEHSDAPLAESLQQEEQGQHH* # ORIGINAL: g5668.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 34949 36665 . + . ID=g5668;Name=g5668.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 34949 36665 . + . ID=g5668.t1;Parent=g5668;Name=g5668.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 34949 35187 . + . ID=g5668.t1.exon1;Parent=g5668.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 34949 35187 . + 0 ID=cds.g5668.t1;Parent=g5668.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 35505 36665 . + . ID=g5668.t1.exon2;Parent=g5668.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 35505 36665 . + 1 ID=cds.g5668.t1;Parent=g5668.t1 #PROT g5668.t1 g5668 MSIKYASDVRSQGEYGGLARMATLMRSRFDRALQDTGTNSTAIIAIDTGGFVGVSRPFTQHAYRSALLGIAESIGFSAFSLTATDVFAGAAAFLDDYETLINASVICSNAVMSPTASDRMRRVLKPFAIQVVNNVTFGILSFVDLKLCEIAPSFCGRGKDVLGVDDPDDRATITTAVNRMLASVDTRPDIIVAVAPNLPFSSLASGHTFGDHVANVDIDIVLLPNGNYLSGIEASMVLTPPPIIDITFGSNRRLLVASSMANGLTVAKIDLTVDTTATERRLSVHPTTAHIFLRPCAPYAPVVEDPLASCVDPAADIAATLRDISNEAERDLDSVVGVLKTALFMEGSFHCRYAECSGGDILTDAIRSYIPSCDIAFINGGSIRAGFPNAIVTGRTVYNAYPFGNTISSFSLQGDVVADAIRHGLSLVTNVTSIPITPLAGSGRYLQFSGLRIRYNPFNPIETRLL # ORIGINAL: g5664.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 21004 22828 . - . ID=g5664;Name=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 21004 22828 . - . ID=g5664.t1;Parent=g5664;Name=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 22500 22828 . - . ID=g5664.t1.exon1;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 22500 22828 . - 0 ID=cds.g5664.t1;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 22141 22282 . - . ID=g5664.t1.exon2;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 22141 22282 . - 1 ID=cds.g5664.t1;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 21608 22033 . - . ID=g5664.t1.exon3;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 21608 22033 . - 0 ID=cds.g5664.t1;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 21004 21477 . - . ID=g5664.t1.exon4;Parent=g5664.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 21004 21477 . - 0 ID=cds.g5664.t1;Parent=g5664.t1 #PROT g5664.t1 g5664 MSAAPSVVTTQCPQVYGQLSHIDPNAVPKWLADRMAERPPPAAQPLRVQAPGESPEVGAPLPSLETTNQEGKGGADDDLMRRLNELKAGVGPMPQPTPSNEDIAGVPTTSSDGDLARRLAALRGDRVDASSESEDTLASRFQALSGRLPASHGTQKKLPPQTASDPDELIAIAMDECALLGDDVLDNILQQRLDRLRGVPSGGEGLNTSESTASRDGPGDAAPKTGVASEDVATDGIVARMLAEAALKAGASVGQDGAARDNNSTSAHKEDAALVAEAQSVLNAHRVLVAGAVDVHAGEDVPTDESGGESDDDAAAIVRQVTDSADLDRKFAPTDATGTLSTASIVPSQKLNEAKSLAGGDAKKQHDGVPTVLDRVDGPIPTVLSLTSVGESDQREEDELPWCCICNDDADVVCDGCDGDLYCKGCFVEGHRGDPEMKTHKMRPFKARRRNNPDDD* # ORIGINAL: g5667.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 28945 31509 . - . ID=g5667;Name=g5667.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 28945 31509 . - . ID=g5667.t1;Parent=g5667;Name=g5667.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 28945 31509 . - . ID=g5667.t1.exon1;Parent=g5667.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 28945 31509 . - 0 ID=cds.g5667.t1;Parent=g5667.t1 #PROT g5667.t1 g5667 MNRAVEEQLRAYAAFNVFSDAVPAIAFVEHLVVAIPFLYDPDHQPAAVLQHAWNVISEFASFSAEEVADLPLNSSQREFFGMSVWVKTVARIMDTPPYDPKEPRLHSRLWLLFLLLRYPSFGSSEVRTALKANAFILGLLKQHISQRDSPLAAYAAIGLAEIYEYDEALVSASASLFIRGLDAIFRISNEKFTVTHTTIARYTTLIGRVLTKIRDWPSFPAHLVQTKGFLNAVPYLNEIMAACRHKSKLMSFTGGAVRTVFVGPRKRLSMTDAANHVKLLGLVRPEWSLALADGTSFASLPSITNKSMPIDEPAQTILFALNLKCHRGSSCTRVNCACELQNAALHFAAGYASLNALSVELIRLSLCGKDGDLHKLFDVAAEIVVAYRVPGRQDPLASARQRISLSDYSTACYVLHNLAINYREIQGGLPGLSGADSPMPDFARLSLQKPCAVAATKALFSHIVALAGDGPLRETLLRWQLTFGRIGASTAGLYVGITVPALLLSSPPFEWCFANGVMFSYMACAVMLGLSVDIAKKSLGSAASTATLLNAILRHISCAFLSTDQSVVQQSMLDVLRRIADATEGFLGITPDVCTGQQLDTDSQAPRRPGVVSDVIINTRIAFEFIAGNRTYPVHQHIDTGALSRWISARFYALPSHVHGLPTAWASLTSESGGPSSLPLETCYAVYCGECDWARWARRVVEKTATAPDACGCGWLRLALSCGSDVKKARKMPGALVTFTDLQPEITAVDSAIVLRVIKGSSEAPAVGDTVAAAHNIITGASNVHQAHSKATPAPVAVEVLEDARTRACVHCGVQDVKTLRCSGCLSVRYCSRECQKSAWAAHKRVCAKNGVAK* # PASA_UPDATE: g5663.t1, single gene model update, valid-1, status:[pasa:asmbl_1222,status:3], valid-1 NODE_132_length_36665_cov_41.4293 . gene 16037 20794 . + . ID=g5663;Name=g5663.t1 NODE_132_length_36665_cov_41.4293 . mRNA 16037 20794 . + . ID=g5663.t1;Parent=g5663;Name=g5663.t1 NODE_132_length_36665_cov_41.4293 . five_prime_UTR 16037 16205 . + . ID=g5663.t1.utr5p1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 16037 16276 . + . ID=g5663.t1.exon1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 16206 16276 . + 0 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 16422 16545 . + . ID=g5663.t1.exon2;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 16422 16545 . + 1 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 16691 16906 . + . ID=g5663.t1.exon3;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 16691 16906 . + 0 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 17088 18425 . + . ID=g5663.t1.exon4;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 17088 18425 . + 0 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 18663 18969 . + . ID=g5663.t1.exon5;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 18663 18969 . + 0 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 19254 19398 . + . ID=g5663.t1.exon6;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 19254 19398 . + 2 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 19535 19681 . + . ID=g5663.t1.exon7;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 19535 19681 . + 1 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 19824 19893 . + . ID=g5663.t1.exon8;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 19824 19893 . + 1 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 20100 20197 . + . ID=g5663.t1.exon9;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 20100 20197 . + 0 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . exon 20359 20794 . + . ID=g5663.t1.exon10;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . CDS 20359 20566 . + 1 ID=cds.g5663.t1;Parent=g5663.t1 NODE_132_length_36665_cov_41.4293 . three_prime_UTR 20567 20794 . + . ID=g5663.t1.utr3p1;Parent=g5663.t1 #PROT g5663.t1 g5663 MSTLNPGDLRRGSVTASRRGGSSRIGGRTGMSVTGSVSRSMAGRQHLGLKKNAAIPEQQRRPAVQVLDGEGNDVTPQSLLQLKPAILKQHAALFGSDSGLASIGGTTDTSSSMTETSGTDVFSSAVAFGRSVFGGSEYNAGGSAMESHTTSGTIDDDDLDSGDAFADMGAGLTGVRTSHEADDEKETLTDADLEKSITINVCETETIWLLDIPSVTAANDAENVAAINKRNETYRNLLKIRPGNDRFVERAMQTFNAPVKNKDAMAMPPRLRDADCMVTQWDIHDSFEAQKKAPSTDANAEAASATAATNGTAGTQTAAPTAASVAPEAAQAVRDATALAASQMSLTGSEGGSVSQSRSGRHVDRSMRSMDLDSTSTTAMLNEALGGIGGLDALTGRAKGSSLQDETVLKSDALLSSLHLVERVINQNAYQTRHALYRDLPVLPQEALYVDGEGAEGDGDKEWDDSDASDDMESDIDPVEGEPTFEGHVEEDGTEAAQLAESAGQGGVLGGGVAEGHVSTGGLELPGMELLWSYRCSLTEGRNVSCIAWNKRNPDLVAVGYGQFNYAEQTTGLVCCWSLKNPEYPERVYKTEWGVMALDWSGSHASLLAVGLYDGAVAIYNVRAAGDKPILDSSETTGKHSDPVWEVKWVERERVTGEERGELLVSISTDGRVTQWSIRKGFEFSDLMKLKRVGSRSKQNGGGAGTSNGAKNEAFISRQAGGLCFDFSRKDSNIYLAGTEEGNIHRCSCSYNEQYLETFFGHTGPVYKIRWSPFNQHAFLSCSADWSVKLWHQEREEPVMSFQSSTNPVGDIAWSPRNASVFASVCENLLEIWDLSSNTLDPIISHKAIESKLSCVSFALNSEALLTGDSSGAVTVYRLVRMPDVDSQSKDEQADVLDKIMTPAAVE* # ORIGINAL: g5660.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 3461 5484 . + . ID=g5660;Name=g5660.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 3461 5484 . + . ID=g5660.t1;Parent=g5660;Name=g5660.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 3461 5118 . + . ID=g5660.t1.exon1;Parent=g5660.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 3461 5118 . + 0 ID=cds.g5660.t1;Parent=g5660.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 5343 5484 . + . ID=g5660.t1.exon2;Parent=g5660.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 5343 5484 . + 1 ID=cds.g5660.t1;Parent=g5660.t1 #PROT g5660.t1 g5660 MSLSARAHMRYMRPQRGRCVVWVGLSLLCFLAVLVSVSQGLRESGQPNSPSPAPTTEGTDASARPSQTASSSLRRGSRSSKTKVASGGVNAPPDAVRGAGGGTVVDGFTDALSVKAGLEHAGIDPTHPSMEAVAKSSGVPSPSPSDVPVAGSAGSQDAARPSVSLKPPVRRTAKKSASSTAPSSKAGGSNSERTVETPRPVAAADGDSGAVTYIDADSGLVEATSSSLSSASVSAATAVGETKASLASRVDATGTGDLLGAKSASPPARASDTETVASTTIASGTKATSVDASDDIPNASSTDRAQHSAQPTSDARVGSKTRSRRTTTTATAAPVADSRIASAMAYMVAGNGLPNTKVAGSAMPNKVADRPVAPSVPPSTPSSGGSLGGRSVGSPPNSVDLGAALLQPQSPEKLTRSTLSTSPVDDANKVEEKNTDAGISSEAVFVDANIETSAHFEEDEDAAATGNSGVFELDANKDTLHENVRGQKARRSRGSVLDASAQGEVGVSRDQGALAPANQVSAVSMSVNAVSLEEASPLLYVETLDGKMHAVESGTGAVRWSLNLGPLLESSPVAPGSSDKFFIPSPRDGVLFVCDPQVI* # PASA_UPDATE: g5661.t1, single gene model update, valid-1, status:[pasa:asmbl_1216,status:12], valid-1 NODE_132_length_36665_cov_41.4293 . gene 5781 10481 . + . ID=g5661;Name=g5661.t1 NODE_132_length_36665_cov_41.4293 . mRNA 5781 10481 . + . ID=g5661.t1;Parent=g5661;Name=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 5781 5874 . + . ID=g5661.t1.exon1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 5781 5874 . + 0 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 6156 6246 . + . ID=g5661.t1.exon2;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 6156 6246 . + 2 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 6494 6690 . + . ID=g5661.t1.exon3;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 6494 6690 . + 1 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 6853 7082 . + . ID=g5661.t1.exon4;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 6853 7082 . + 2 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 7351 8838 . + . ID=g5661.t1.exon5;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 7351 8838 . + 0 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 9190 9336 . + . ID=g5661.t1.exon6;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 9190 9336 . + 0 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 9548 9910 . + . ID=g5661.t1.exon7;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 9548 9910 . + 0 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . exon 10169 10481 . + . ID=g5661.t1.exon8;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . CDS 10169 10369 . + 0 ID=cds.g5661.t1;Parent=g5661.t1 NODE_132_length_36665_cov_41.4293 . three_prime_UTR 10370 10481 . + . ID=g5661.t1.utr3p1;Parent=g5661.t1 #PROT g5661.t1 g5661 MGLKTTSILAIDPIAGRVIKRYQPTLAADDEDSFPSLPPGTIFVGRTVYNLTIQFTDRTKPKWHVTYAQYLPSVTNGKDYKRIQSLGNTVFFAGVNNGTLTARDKTSGELRWSVRFQSTPMSLFAVRDEQTARLAFVPLLNDFDGPDDATNGDAFVRRQFGGDGFRIPATLSPHVLIGVHEGALYAQMVLRNAAEGHALRGRDGLPLISDGGQRIPAGKDGRDVTDVAIVGGHDPSLHYDALTCERVSLNCDARGGGDGLSDGAGAAEACVPGSPNFPFCLVGVHEVPSVGLSIIPEIHSSETTPSIPSDHTIRLPSTGDGRPRDDIADVDRKSDAEAQKIPAAPVTHTTVLTVGAATATVIAVMVVAYMSRGRPTPSPTPLKGSSAVENISAVGMQNSALSPSKPRKKKTKKKASSKSAIASTPGAPDADMDSADHSDPDVDAVVVTAAGNSGGANDAAWPSSPAPPSPVRPATTPLPKAPAGDSLRVESAASMENNASESGSRTDVPVQLFSGGTFSEPVHHSDGTYTLGRLRVSGTVLGHGCHGTVVLKGDYEGRPVAVKRMLAEWFDLATREIDLLQKSDAHPHVIRYYCREQDSRFLYIALELCAMTLVQWVEEQAKPADRRSEALAIHTKHPLDARRLLMEVMDGLAHLHSIGVVHRDLKPQNVLLTSRGRALISDFGLCKLLVDGQSSYHTNVVAGTVGWTAPEMLREARTTRAVDIFSAGCLVFYAVTGGRHPFGEHYERELNIRNGKSDLHLLAHDPETSDLVGSMICDSASMRRSAPDALRHPFFWAPARRLHFLMEFSDRIEKEDALSPLVTALEHAGASVVGEDWRTRLEPELLADMGKFRKYNWASVRDLLRAMRNKKHHYRELNESLRLSLGEVPDGFYGYFNSRFPLLLMRTYGIVRSGPCKDERMFEPYFASAAGHSIVG* # PASA_UPDATE: g5662.t1, single gene model update, valid-1, status:[pasa:asmbl_1219,status:12], valid-1 NODE_132_length_36665_cov_41.4293 . gene 10641 15550 . - . ID=g5662;Name=g5662.t1 NODE_132_length_36665_cov_41.4293 . mRNA 10641 15550 . - . ID=g5662.t1;Parent=g5662;Name=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 15501 15550 . - . ID=g5662.t1.exon1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 15501 15550 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 15075 15246 . - . ID=g5662.t1.exon2;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 15075 15246 . - 1 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 14764 14896 . - . ID=g5662.t1.exon3;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 14764 14896 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 14315 14536 . - . ID=g5662.t1.exon4;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 14315 14536 . - 2 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 13971 14137 . - . ID=g5662.t1.exon5;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 13971 14137 . - 2 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 13560 13722 . - . ID=g5662.t1.exon6;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 13560 13722 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 13287 13447 . - . ID=g5662.t1.exon7;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 13287 13447 . - 2 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 12951 13082 . - . ID=g5662.t1.exon8;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 12951 13082 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 12642 12761 . - . ID=g5662.t1.exon9;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 12642 12761 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 12315 12431 . - . ID=g5662.t1.exon10;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 12315 12431 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 11946 12155 . - . ID=g5662.t1.exon11;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 11946 12155 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 11634 11729 . - . ID=g5662.t1.exon12;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 11634 11729 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 11307 11366 . - . ID=g5662.t1.exon13;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 11307 11366 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . exon 10641 11012 . - . ID=g5662.t1.exon14;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . CDS 10827 11012 . - 0 ID=cds.g5662.t1;Parent=g5662.t1 NODE_132_length_36665_cov_41.4293 . three_prime_UTR 10641 10826 . - . ID=g5662.t1.utr3p1;Parent=g5662.t1 #PROT g5662.t1 g5662 MEEVDNIIILTLRQAGCTVPEGVSGLKDFTTDIVVQSTSKCLRLIDESRQIADRLPTAMSGRVRICSTLAAACQELGYSNDIGYHQFLYPSETEARKLFMWLIEKLPREAADAGDEPTGPAAVLNRTIAAEVTRRLDESWTLSMCKPNGVILRGKQRPHQWHFQGCRGVHRIRTHRVKAPGAVGDVTVRVSKEDKAAWDALPFITAQPPIRQDVAPSIIEKNQLEYILAKEWEDELARLGLDATTSEAEYRAKRRKGILSRMADHLRAAAMKGADGQSGALGGKGLSSGGGDGLDALLASFAGDRAHLDGKASRFAHAEKLQFTQDVKIATTADTSLAAAASQGAAAAVAAPEKNEISLEELQRQREAELAALQAKLDALSLDVERMETDIRGYTSGIGQMEGSLATSADSTSKKEEEYLVKKRVYDLLPDAQRNIAQLQGMIDAASARLRELAAQWESHRLPLIEQYRDAKEAKTNRLGASRRKLEQIKEFRDQMRTLAEEARTKDDLLKQLIDEYERMAKDINRAAYTRRILEIVRNIKKQREDIDKVLIDTRNVQKEINSTSETLNRTYAVTDELIFKDAKKDEACKKAYKYLATLHETCGTLVRTVEETGKTLNEIRDLEDKIENISALNISKNMEQITEDYLTIKKENSALAAKVGL* # ORIGINAL: g5658.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 136 1234 . - . ID=g5658;Name=g5658.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 136 1234 . - . ID=g5658.t1;Parent=g5658;Name=g5658.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 902 1234 . - . ID=g5658.t1.exon1;Parent=g5658.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 902 1234 . - 0 ID=cds.g5658.t1;Parent=g5658.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 136 639 . - . ID=g5658.t1.exon2;Parent=g5658.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 136 639 . - 0 ID=cds.g5658.t1;Parent=g5658.t1 #PROT g5658.t1 g5658 MALLLRSGLFARLASLPAASSVVRTCSFATSSAVKPDVAVLSRLRKETGLPMGTCREAVVVCSNDYDKAFAWLTEQQAKLGNSKLVKLASRATAEGALGVRISGSKAAVVEMNCETDFVSRNQVFQDLVNGVLDAAITLVPASQGSASQRSVISTDSLKNAVGSSGKTVATLTAESVSKLGENVQVGRSIAFSAPDNTRFGAYVHGMGRYAGLVALRTTPPVASSEVDKTQKLDELARRIAQHVVGMSPAALHPSADVPDERALLKQSFVLDPASRVEQ # ORIGINAL: g5659.t1 original gene structure, not modified by PASA NODE_132_length_36665_cov_41.4293 AUGUSTUS gene 1568 2469 . + . ID=g5659;Name=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS mRNA 1568 2469 . + . ID=g5659.t1;Parent=g5659;Name=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 1568 1594 . + . ID=g5659.t1.exon1;Parent=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 1568 1594 . + 0 ID=cds.g5659.t1;Parent=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 1936 2079 . + . ID=g5659.t1.exon2;Parent=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 1936 2079 . + 0 ID=cds.g5659.t1;Parent=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS exon 2413 2469 . + . ID=g5659.t1.exon3;Parent=g5659.t1 NODE_132_length_36665_cov_41.4293 AUGUSTUS CDS 2413 2469 . + 0 ID=cds.g5659.t1;Parent=g5659.t1 #PROT g5659.t1 g5659 MGHYPYPLQKSEAIERWASMRENTHLHFRFTRKTTAILFISMGLIPYGLFRLFTAQAEIIDAKKGRKVYYLGGSH* # PASA_UPDATE: g5666.t1, single gene model update, valid-1, status:[pasa:asmbl_1220,status:3], valid-1 NODE_132_length_36665_cov_41.4293 . gene 26979 28401 . - . ID=g5666;Name=g5666.t1 NODE_132_length_36665_cov_41.4293 . mRNA 26979 28401 . - . ID=g5666.t1;Parent=g5666;Name=g5666.t1 NODE_132_length_36665_cov_41.4293 . five_prime_UTR 28238 28401 . - . ID=g5666.t1.utr5p1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . exon 28195 28401 . - . ID=g5666.t1.exon1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . CDS 28195 28237 . - 0 ID=cds.g5666.t1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . exon 27846 27974 . - . ID=g5666.t1.exon2;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . CDS 27846 27974 . - 2 ID=cds.g5666.t1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . exon 27515 27633 . - . ID=g5666.t1.exon3;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . CDS 27515 27633 . - 2 ID=cds.g5666.t1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . exon 26979 27170 . - . ID=g5666.t1.exon4;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . CDS 27069 27170 . - 0 ID=cds.g5666.t1;Parent=g5666.t1 NODE_132_length_36665_cov_41.4293 . three_prime_UTR 26979 27068 . - . ID=g5666.t1.utr3p1;Parent=g5666.t1 #PROT g5666.t1 g5666 MTTEDNYYLLSAVPLSDSKETGASNLLVKNGLADEYRKFCANRPNGPHLNDYAASVVDGDVIVSDKYSLRVIVDQPPIGGEVIKPLDTTRFTLKPGKIPDMELQRLGRDVHSRHKQKRSKHNDGSRRGDR* # ORIGINAL: g6896.t1 original gene structure, not modified by PASA NODE_8496_length_368_cov_437.949 AUGUSTUS gene 1 368 . - . ID=g6896;Name=g6896.t1 NODE_8496_length_368_cov_437.949 AUGUSTUS mRNA 1 368 . - . ID=g6896.t1;Parent=g6896;Name=g6896.t1 NODE_8496_length_368_cov_437.949 AUGUSTUS exon 1 368 . - . ID=g6896.t1.exon1;Parent=g6896.t1 NODE_8496_length_368_cov_437.949 AUGUSTUS CDS 1 368 . - 0 ID=cds.g6896.t1;Parent=g6896.t1 #PROT g6896.t1 g6896 EEDTAGAGSKVQVRVIRKAGLFSAQTVSWSSEIEAGVTGEQYGPLSGVVAFDAGASEGFINLAITADDIAELSQSIRVNLTGVVGGGRLGSADTQSATVTITESDDAHGVFGFAAGSLSVST # PASA_UPDATE: g14057.t1, single gene model update, valid-1, status:[pasa:asmbl_8352,status:3], valid-1 NODE_590_length_20522_cov_41.0505 . gene 9693 12385 . - . ID=g14057;Name=g14057.t1 NODE_590_length_20522_cov_41.0505 . mRNA 9693 12385 . - . ID=g14057.t1;Parent=g14057;Name=g14057.t1 NODE_590_length_20522_cov_41.0505 . five_prime_UTR 12255 12385 . - . ID=g14057.t1.utr5p1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 12092 12385 . - . ID=g14057.t1.exon1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 12092 12254 . - 0 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 11771 11951 . - . ID=g14057.t1.exon2;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 11771 11951 . - 2 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 11337 11632 . - . ID=g14057.t1.exon3;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 11337 11632 . - 1 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 11050 11213 . - . ID=g14057.t1.exon4;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 11050 11213 . - 2 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 10645 10916 . - . ID=g14057.t1.exon5;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 10645 10916 . - 0 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . exon 9693 10497 . - . ID=g14057.t1.exon6;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . CDS 10095 10497 . - 1 ID=cds.g14057.t1;Parent=g14057.t1 NODE_590_length_20522_cov_41.0505 . three_prime_UTR 9693 10094 . - . ID=g14057.t1.utr3p1;Parent=g14057.t1 #PROT g14057.t1 g14057 MHFPKHAKFAAYAFAAQAAFVILFGLVTEYDSGLTGQNQADEITLKYSFYQDVHVMIFVGFGFLMTFLRKYGFSAVGFNFLIGAFVIQWSFFCLGFFHQLLGGTHWESIKLSVDSLISADFAAASCLIAFGAIIGKTSPLQLLVSSTLQVIVYSLNEAILVKKFNVVDIGGSMVIHAFGAYYGLATSLVMAKKETMAHKHNGSTHINDIFAMIGTIFLWMYWPSFNGALSVGPQQHRTVLNTVISLCACCVTAFLLSQLLRPSRKFEMVDIQNATLAGGVAVGAVADLYIRPYGAALIGCTAGAVSVLGYIFLQPRLERWIRLQDTCGINNLHGMPGIIGGVASIIASAVASYSTYGASLYVVFPARDPMGSNWSASHQALMQLASLGTTLGIALVAGALNGLLLRLPIFNEPAPENAFLDGEHWELPHGNSHEHGPELVEVKAWEEKTPESLSLSGPESTTRVGSSAKTSKKASKKKVTPIISDDLELQDV* # PASA_UPDATE: g14054.t1, single gene model update, valid-1, status:[pasa:asmbl_8350,status:3], valid-1 NODE_590_length_20522_cov_41.0505 . gene 840 4342 . - . ID=g14054;Name=g14054.t1 NODE_590_length_20522_cov_41.0505 . mRNA 840 4342 . - . ID=g14054.t1;Parent=g14054;Name=g14054.t1 NODE_590_length_20522_cov_41.0505 . five_prime_UTR 3982 4342 . - . ID=g14054.t1.utr5p1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . exon 3681 4342 . - . ID=g14054.t1.exon1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . CDS 3681 3981 . - 0 ID=cds.g14054.t1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . exon 3289 3416 . - . ID=g14054.t1.exon2;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . CDS 3289 3416 . - 2 ID=cds.g14054.t1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . exon 2792 2980 . - . ID=g14054.t1.exon3;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . CDS 2792 2980 . - 0 ID=cds.g14054.t1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . exon 2401 2525 . - . ID=g14054.t1.exon4;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . CDS 2401 2525 . - 0 ID=cds.g14054.t1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . exon 840 2007 . - . ID=g14054.t1.exon5;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . CDS 1080 2007 . - 1 ID=cds.g14054.t1;Parent=g14054.t1 NODE_590_length_20522_cov_41.0505 . three_prime_UTR 840 1079 . - . ID=g14054.t1.utr3p1;Parent=g14054.t1 #PROT g14054.t1 g14054 MANPSNVMPSPSKCMSPRGSLASTSNASITSESLGSYGTPTRSGESNRSSVRVYRKESGDKLMSAFMPGRVYAERPTGVDPVEVVVLMARGSMRAEKNLEIYAQMQCVIQGGNDDWDTLSIPVEKVVHKQRMRVHPLMSEDDETPNTPFHSYLRQKYGVDAIPITVAIPPGLPSTAYIHAINGKSQCKSKSSGVTFKLSLTYNTPAVPKDKDEASRTINFYFRKVSCLPKYPAIIDSMPFEIPGLQISLDKQIYYPGDVVTVTALVLNTSFWAIKKIRCQLEQHIELRLEKSQKGWTTQSTLSSSATKQGCPIGKNATVTATFTHTLRLPEAGQGDKLATNTLVAADGWDAKDGVELAASAALHEFESGYGKGRQLEQVGLEVQYMVTVTCKRIGGILTLSVPVILCGALATDPFVAAARPTEVGRRASFDAQSDPSSFAMSRDAPRRASLSLDSRPSRGLGVAFARTASTNSEVIHEAVDESEAPRRSALSTVSRISEDASEALEESRGSGDGSVFSAGADQDASERRKGSSTPSDSGTSGHSVAECATVCPPVT* # ORIGINAL: g14059.t1 original gene structure, not modified by PASA NODE_590_length_20522_cov_41.0505 AUGUSTUS gene 18352 20471 . + . ID=g14059;Name=g14059.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS mRNA 18352 20471 . + . ID=g14059.t1;Parent=g14059;Name=g14059.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS exon 18352 20256 . + . ID=g14059.t1.exon1;Parent=g14059.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS CDS 18352 20256 . + 0 ID=cds.g14059.t1;Parent=g14059.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS exon 20421 20471 . + . ID=g14059.t1.exon2;Parent=g14059.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS CDS 20421 20471 . + 0 ID=cds.g14059.t1;Parent=g14059.t1 #PROT g14059.t1 g14059 MSECPFRSGTISPRGTSVSTPGIFGGEADGGSGGGQNGNGPFRSSAHSSPNNAFSLDSNTPSALRAVRTVSRPASSLAPASPDTANTRSSPMFPRNLHGSASPSPQATPHSECAPMDTSDSIDSTHLPPEHMNSTLSLMALISGGNAEFTAPRCPVTKSRAGSGCPFPLMAATAPTNALRPDFNSGLSNLAMNSAAMATAAAHIAASEACPDVHMRSYTHGIVLVLDEIGLILRAEGDVRSCFGFGLEDLVGTHVSFIIPAFCREGHTWKEALRDGGVCIEARRRDGTELFLDMKISDGTSSIGGGNPLRSLSLERLLDGLAREEGRQLYVAYLRDVNDNSMMQRCLDLERQRLQAVLDLAIDAIITIDPQGTVASFNHAAERMFGYAAQEVVGRNVKMLMPSPFAENHDEYLRSYLSTGRRRVIGIGREVEGLRKNGSVFPMELSLSEVKSEDFHFFTGFVRDISQRTHMQNEIRHQQEKLQAVLDLAVDAIITIDPSAIIQSFNKAAEEMFGFSAMDVIGSNVNMLMPEEHAKLHDGYVRQYLLTGVRKVIGIGRDVRGQRKDKTTFPMELSVSEVKNDICHLFTGIIRDTTAKTERDDEMRRLARMEVELAEKTALSRNLFFANVSHEIKTPLNGIVGIIQMVRTRTA* # PASA_UPDATE: g14055.t1, single gene model update, valid-1, status:[pasa:asmbl_8353,status:12],[pasa:asmbl_8355,status:12], valid-1 NODE_590_length_20522_cov_41.0505 . gene 5527 7186 . + . ID=g14055;Name=g14055.t1 NODE_590_length_20522_cov_41.0505 . mRNA 5527 7186 . + . ID=g14055.t1;Parent=g14055;Name=g14055.t1 NODE_590_length_20522_cov_41.0505 . five_prime_UTR 5527 5701 . + . ID=g14055.t1.utr5p1;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . exon 5527 6116 . + . ID=g14055.t1.exon1;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . CDS 5702 6116 . + 0 ID=cds.g14055.t1;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . exon 6202 6964 . + . ID=g14055.t1.exon2;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . CDS 6202 6964 . + 2 ID=cds.g14055.t1;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . exon 7147 7186 . + . ID=g14055.t1.exon3;Parent=g14055.t1 NODE_590_length_20522_cov_41.0505 . CDS 7147 7186 . + 1 ID=cds.g14055.t1;Parent=g14055.t1 #PROT g14055.t1 g14055 MASFSSLPIEVLVTGVFPLLDQWDAIALSQTNSILRSHLRKLCIFRLTDKWSRLFYEDEGFRSRVLGVISRHLLAIRLDFESYSDHHGGSGVVDVSALGGVHTLNLSGCKGVVDVSALGGVHTLNLSDCSGVVDVSALGGVHTLDFHNCKRVVDVSALGGVHTLDLSGCNLVVDVSALGGVHTLDLSGCSGVVDVSALGGVHTLDLSGCNLVVDVSALGGVHTLDLSGCNLVVDVSALSGVHTLDLSGCNRVVGVSSLGSVHTLDLSGCNRVVDVSALGGVHKLNLRGCSGVVDVSALGGVHTFNLSTCNGVVDVSALGGVHTLNLSTCNGVVDVSALRGVHHTLNLSGSNGVVDVSALGGVHTLDLSYCEGVMDVSALGGVTRSSSIIAWEWRGAHTGHWRYEK* # PASA_UPDATE: g14056.t1, single gene model update, valid-1, status:[pasa:asmbl_8351,status:3], valid-1 NODE_590_length_20522_cov_41.0505 . gene 7718 9369 . - . ID=g14056;Name=g14056.t1 NODE_590_length_20522_cov_41.0505 . mRNA 7718 9369 . - . ID=g14056.t1;Parent=g14056;Name=g14056.t1 NODE_590_length_20522_cov_41.0505 . five_prime_UTR 9230 9369 . - . ID=g14056.t1.utr5p1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . exon 9206 9369 . - . ID=g14056.t1.exon1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . CDS 9206 9229 . - 0 ID=cds.g14056.t1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . exon 8985 9089 . - . ID=g14056.t1.exon2;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . CDS 8985 9089 . - 0 ID=cds.g14056.t1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . exon 8686 8833 . - . ID=g14056.t1.exon3;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . CDS 8686 8833 . - 0 ID=cds.g14056.t1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . exon 8222 8501 . - . ID=g14056.t1.exon4;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . CDS 8222 8501 . - 2 ID=cds.g14056.t1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . exon 7718 7958 . - . ID=g14056.t1.exon5;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . CDS 7793 7958 . - 1 ID=cds.g14056.t1;Parent=g14056.t1 NODE_590_length_20522_cov_41.0505 . three_prime_UTR 7718 7792 . - . ID=g14056.t1.utr3p1;Parent=g14056.t1 #PROT g14056.t1 g14056 MFVRRTSKENIMEKRTWEIVKDLLKILREADETDSDYEGTATEIFPWLYLGAAYDAHSLDWLSTTGVDCVLNMAAGQVQTGTGYYPSDMEYLEFDVVDGEDCDISAHFDAALSFLASAKSSNRRAFVHCVAGVSRSATVVLAYLVKHEGMALHEAVRYLAQRRPIICPNDGFLYQLVDFAMKFGPRDESGVPTVLSATASRKKHTPSRQNSVSLSSSSVASNITSPALSPSPVRNHVVVE* # ORIGINAL: g14058.t1 original gene structure, not modified by PASA NODE_590_length_20522_cov_41.0505 AUGUSTUS gene 13786 16500 . + . ID=g14058;Name=g14058.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS mRNA 13786 16500 . + . ID=g14058.t1;Parent=g14058;Name=g14058.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS exon 13786 15890 . + . ID=g14058.t1.exon1;Parent=g14058.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS CDS 13786 15890 . + 0 ID=cds.g14058.t1;Parent=g14058.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS exon 16356 16500 . + . ID=g14058.t1.exon2;Parent=g14058.t1 NODE_590_length_20522_cov_41.0505 AUGUSTUS CDS 16356 16500 . + 1 ID=cds.g14058.t1;Parent=g14058.t1 #PROT g14058.t1 g14058 MRRSSLRPRPCRTFTADVDADAESAEINEEAIEGGRRTKLAPSFDVLRDYLGDYSPVDSFSASVRSPKVYQPIRHGGVVVTPTINEDESNIRVDFLSHLPRELSVAILSHLNAVDLSIVGSVSSVWRDVALDSSLWRHLCARKGWGMDAGSSKKLVRAHSESDYQLQSSQDLSSQTSTRSAGAHALHWRSLYVRGHLTEQNWLRGHWRRKRTLHHAQIVLSIAIDPHSVSRGSCDNASASVISSPIKQRTLSTRASSYSANASPRTPRLMRSGSRVGDRLDTYDGSLASARVFTGSWNGRVLLWDLRGGSTFTEVAQCRSPVSCLSLASDSLAYGETTGPAHICDRETFKELAVLDPGVIAADINPLTHNPEHGLTAVAPSMTMSPHGAVSLDRSGSLVAVGGAEGVVWLWDLRAPSRPCAQSTHVGASIFCVGFAKRQGWESRDYGAADFGMSSMGIYFAHDRHLARWDLRRGTSGTSTVASTSREIVSLQVGSAHIVVGDESNRIRTWRTDPESLSNPPHVIHASARCMCIVNGNLVTGGYDAAVKLWRPSRDGERWVHLSTINHHTGDVNGVHGVDGLLASASDDGTAVLWSFEPSATQLHEHDGDDGTTRAPPESPFTIRSQSSQENRALMRRTSSFGGSDADRTFNKEIEVGSPTTRESNWGFREAALTALAGAPCPLSCAEIMEAVEEAGLLDLSTLCTGPSKCLVLFDGKPHRFAMIAGDDVANSVQVDASDVAPLNAFDTQ* # PASA_UPDATE: g1325.t1, single gene model update, valid-1, status:[pasa:asmbl_4804,status:12], valid-1 NODE_2688_length_5446_cov_38.801 . gene 1940 5005 . - . ID=g1325;Name=g1325.t1 NODE_2688_length_5446_cov_38.801 . mRNA 1940 5005 . - . ID=g1325.t1;Parent=g1325;Name=g1325.t1 NODE_2688_length_5446_cov_38.801 . five_prime_UTR 5005 5005 . - . ID=g1325.t1.utr5p1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 4891 5005 . - . ID=g1325.t1.exon1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 4891 5004 . - 0 ID=cds.g1325.t1;Parent=g1325.t1;5_prime_partial=true NODE_2688_length_5446_cov_38.801 . exon 4671 4779 . - . ID=g1325.t1.exon2;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 4671 4779 . - 0 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 4417 4523 . - . ID=g1325.t1.exon3;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 4417 4523 . - 2 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 4165 4228 . - . ID=g1325.t1.exon4;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 4165 4228 . - 0 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 3880 4010 . - . ID=g1325.t1.exon5;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 3880 4010 . - 2 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 3631 3761 . - . ID=g1325.t1.exon6;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 3631 3761 . - 0 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 3412 3497 . - . ID=g1325.t1.exon7;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 3412 3497 . - 1 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 2869 2963 . - . ID=g1325.t1.exon8;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 2869 2963 . - 2 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 2582 2704 . - . ID=g1325.t1.exon9;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 2582 2704 . - 0 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . exon 1940 2402 . - . ID=g1325.t1.exon10;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . CDS 2238 2402 . - 0 ID=cds.g1325.t1;Parent=g1325.t1 NODE_2688_length_5446_cov_38.801 . three_prime_UTR 1940 2237 . - . ID=g1325.t1.utr3p1;Parent=g1325.t1 #PROT g1325.t1 g1325 LGTIAADGTLLVWDTRGNKRDHMKSLKNLDLIWRPLMKVTLNRPDIAGEFGGTKFVLPRPLASQAHHHESALDRVSHGDDPHHLRGGSAGRSRKKLDIPTHSTKFFAGTEDGELVYMDWRVEKDHESGKIIPTKAEQFWRGHSGAVSALQRSPFFKDLLLGVGAWTFSIWKEDIRGSPLLISPCSQTYMTGGCWSPSRPGVFYIAKADGNVDVWDILDRSHEPAMTQNVSSFPIKSISPVQVSQHSQATRLQFLAIGDDAGTLHILEVPRSLTRPSSNEVAAVENFFEREAKRVHYMLDRNRVRADEKRNMDGNVPRAKGESGTEDVVEVEFHNRADNEYAEYLKMEQEFLDELGVRPAWQGGSGGLDEEPGAK* # ORIGINAL: g1324.t1 original gene structure, not modified by PASA NODE_2688_length_5446_cov_38.801 AUGUSTUS gene 340 1383 . + . ID=g1324;Name=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS mRNA 340 1383 . + . ID=g1324.t1;Parent=g1324;Name=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS exon 340 448 . + . ID=g1324.t1.exon1;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS CDS 340 448 . + 0 ID=cds.g1324.t1;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS exon 628 743 . + . ID=g1324.t1.exon2;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS CDS 628 743 . + 2 ID=cds.g1324.t1;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS exon 950 1092 . + . ID=g1324.t1.exon3;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS CDS 950 1092 . + 0 ID=cds.g1324.t1;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS exon 1239 1383 . + . ID=g1324.t1.exon4;Parent=g1324.t1 NODE_2688_length_5446_cov_38.801 AUGUSTUS CDS 1239 1383 . + 1 ID=cds.g1324.t1;Parent=g1324.t1 #PROT g1324.t1 g1324 MALVNITNIGVVENPAPFTHPFQFEISFECLAQLEEDLEWKIVYVGSAETEEYDQVLDSILVGPVPVGLNKFVFQANSPDVSRIPAQDLLGVTIVLITCAYRDKEFIRVGYYVNNDYADAELRENPPPKVDLLRVYRNILATQPRVTRFPIDWEPRQTQTAPLPTSPYAL* # ORIGINAL: g1889.t1 original gene structure, not modified by PASA NODE_755_length_18089_cov_39.0217 AUGUSTUS gene 16488 17204 . + . ID=g1889;Name=g1889.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS mRNA 16488 17204 . + . ID=g1889.t1;Parent=g1889;Name=g1889.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 16488 16671 . + . ID=g1889.t1.exon1;Parent=g1889.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 16488 16671 . + 0 ID=cds.g1889.t1;Parent=g1889.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 17086 17204 . + . ID=g1889.t1.exon2;Parent=g1889.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 17086 17204 . + 2 ID=cds.g1889.t1;Parent=g1889.t1 #PROT g1889.t1 g1889 MRLRSGEVDEDVVEEHASQESTQSERGRGTQSSRKNSSNVQPHARQQVTPHVKQWVLVAPKGEATRYILSDTCRLLELQELREDCRSWFAGNTYHESEYR* # PASA_UPDATE: g1887.t1, single gene model update, valid-1, status:[pasa:asmbl_9212,status:3], valid-1 NODE_755_length_18089_cov_39.0217 . gene 12439 14871 . + . ID=g1887;Name=g1887.t1 NODE_755_length_18089_cov_39.0217 . mRNA 12439 14871 . + . ID=g1887.t1;Parent=g1887;Name=g1887.t1 NODE_755_length_18089_cov_39.0217 . five_prime_UTR 12439 12509 . + . ID=g1887.t1.utr5p1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 12439 12714 . + . ID=g1887.t1.exon1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 12510 12714 . + 0 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 12846 12999 . + . ID=g1887.t1.exon2;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 12846 12999 . + 2 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 13334 13397 . + . ID=g1887.t1.exon3;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 13334 13397 . + 1 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 13580 13703 . + . ID=g1887.t1.exon4;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 13580 13703 . + 0 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 13940 14021 . + . ID=g1887.t1.exon5;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 13940 14021 . + 2 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . exon 14489 14871 . + . ID=g1887.t1.exon6;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . CDS 14489 14798 . + 1 ID=cds.g1887.t1;Parent=g1887.t1 NODE_755_length_18089_cov_39.0217 . three_prime_UTR 14799 14871 . + . ID=g1887.t1.utr3p1;Parent=g1887.t1 #PROT g1887.t1 g1887 MADIIATLKDIANLPIYNELVGVTKQPAAETARIAYDYVVELTKIKVGFWLFFAHCLLTVLYLRIKDADALPHARRNPIVSCLLTVVVCCGSSITTSIVIGERFQPLEYDYPIIAAILAWYIIYFSPFDLGIKLVKFTPIKVALSIMKEIQRVRKIIINVELAAATVFPKSIVGIVVLGTIGGCGSGLWGWIARVARGAPAHFELDDPTFSTRSSLYASIALALAQKGLVPYDKTGVAVIFLVATVLYHVVSAVTGASPNAFYPIELVPRALLAVGTATQPSEKTGTPSSAPRASAGVSAVSPNKNGKEKKH* # ORIGINAL: g1888.t1 original gene structure, not modified by PASA NODE_755_length_18089_cov_39.0217 AUGUSTUS gene 15654 15977 . - . ID=g1888;Name=g1888.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS mRNA 15654 15977 . - . ID=g1888.t1;Parent=g1888;Name=g1888.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 15654 15977 . - . ID=g1888.t1.exon1;Parent=g1888.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 15654 15977 . - 0 ID=cds.g1888.t1;Parent=g1888.t1 #PROT g1888.t1 g1888 MKNNKALPPSPKKRYHSTAREKSCAEWRPSIVRIINEFNADNHVPTINDIHDKLCNEGFPFKRSRLHKELSNMGYERLIGPTQADASQAQASPLSPCLPVEDPNPPL* # PASA_UPDATE: g1885.t1, single gene model update, valid-1, status:[pasa:asmbl_9210,status:3], valid-1 NODE_755_length_18089_cov_39.0217 . gene 1728 5690 . + . ID=g1885;Name=g1885.t1 NODE_755_length_18089_cov_39.0217 . mRNA 1728 5690 . + . ID=g1885.t1;Parent=g1885;Name=g1885.t1 NODE_755_length_18089_cov_39.0217 . five_prime_UTR 1728 1907 . + . ID=g1885.t1.utr5p1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 1728 1983 . + . ID=g1885.t1.exon1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 1908 1983 . + 0 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 2292 2389 . + . ID=g1885.t1.exon2;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 2292 2389 . + 2 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 2612 2771 . + . ID=g1885.t1.exon3;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 2612 2771 . + 0 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 2919 3212 . + . ID=g1885.t1.exon4;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 2919 3212 . + 2 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 3422 3586 . + . ID=g1885.t1.exon5;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 3422 3586 . + 2 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 3938 4199 . + . ID=g1885.t1.exon6;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 3938 4199 . + 2 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . exon 4391 5690 . + . ID=g1885.t1.exon7;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . CDS 4391 4667 . + 1 ID=cds.g1885.t1;Parent=g1885.t1 NODE_755_length_18089_cov_39.0217 . three_prime_UTR 4668 5690 . + . ID=g1885.t1.utr3p1;Parent=g1885.t1 #PROT g1885.t1 g1885 MATDGLGWRFSQAFGDKGNVEDITEADIISTVEFTHSGNFLATGDKGGRIVLFEHVTGKNKGKSGEFRFYTEFQSHEPEFDYLKSLEIEEKINKIKWIKPQNASNFLLSTNDKTIKLWKIYEKDIKSVTGLNLEGKDMSVRQSSRVTQLKVPKLKHVETAVAAVPKRVFANAHAYHINSISVNSDSETYLSADDLRINLWNLGINDQSFNIVDIKPANMEELTEVITAAEFHPIHCNVFMYSSSKGTIKLCDQRQSALCDTHFKSFEEEEDPANKSFFSEIISSISDVRFSNNGRYILARDYLTVKIWDIAMEKKPVQVFPIHDYLRSKLCDLYENDCIFDKFECAWGANDQSIVTGSYHNMFHVIDQDGENDVCLEASKVAKKPVRVTSPKKIAASKKRPKDDINVETIDFNRKILHSAWHPRENIIAVAATNNLFLYAQDK* # ORIGINAL: g1886.t1 original gene structure, not modified by PASA NODE_755_length_18089_cov_39.0217 AUGUSTUS gene 6171 11729 . + . ID=g1886;Name=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS mRNA 6171 11729 . + . ID=g1886.t1;Parent=g1886;Name=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 6171 6297 . + . ID=g1886.t1.exon1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 6171 6297 . + 0 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 6479 6553 . + . ID=g1886.t1.exon2;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 6479 6553 . + 2 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 6817 6944 . + . ID=g1886.t1.exon3;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 6817 6944 . + 2 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 7114 7455 . + . ID=g1886.t1.exon4;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 7114 7455 . + 0 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 7673 9198 . + . ID=g1886.t1.exon5;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 7673 9198 . + 0 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 9531 9664 . + . ID=g1886.t1.exon6;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 9531 9664 . + 1 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 10015 10908 . + . ID=g1886.t1.exon7;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 10015 10908 . + 2 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 11091 11172 . + . ID=g1886.t1.exon8;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 11091 11172 . + 2 ID=cds.g1886.t1;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS exon 11519 11729 . + . ID=g1886.t1.exon9;Parent=g1886.t1 NODE_755_length_18089_cov_39.0217 AUGUSTUS CDS 11519 11729 . + 1 ID=cds.g1886.t1;Parent=g1886.t1 #PROT g1886.t1 g1886 MRLFASADEYIITANDAEETLRCSRVDGTLCPGRPLLDHFEEEETKGGAPAVVGDIQGVIGKIRLFSGWRLIVITESTCVGQIAAADVFRIDKIAVLPLLKDVDPLSDMQNDGDEKEGGQATPSAPGVSGQRSPRPTPREEVVVGQPTERITMMQDKAPQSTPSGNTGSGTAGASTPPNAPIATTRNTNDKMQDMIAKTLDSVKTALALNLPMDNIKDRGKGLTPDIQLKFRTQLEQRLIREIRRMYDSGFFFYSYEYDLTNTVQRTAAANNAAGSSAGILPRKPLWRGADERFFWNKSMCIDLIGSLVASRRASVEVGATDDEGQPHSLHDIVDRWVLPVVQGYVSLIRCRVGSSDFEVALISRRSRHRAGTRYRRRGIDASGNVANYVETEQIVRFEGHTSAFVQVRGSVPVFWTQSGRQYRPLARLDPTKTADETLAAFRVHFGSEVARYGSKVVVVNLLERTGGQEMMLCNSFADNILRQGSDDVGYYEFDFHLHCKGMKYENVSLLIDQLDVCITDMRHSWVSPTGQLLCTQQGICRTNCLDCLDRTNVVQSAIARRAFAAQLMRFGILSPEQSVSGEGASALQEAWANNGDAISRQYAGTSAMKSDYTRTGKRNWHGMMNDGYNSLARYFMNNFRDVYRQAVIDLQLGIATPEDILASSSAETSSDGDGAEEAVEGEPSASVQPATEEEWNRFREDSYADALATCKSVLVPNNESQIGGWILVEVEGNGHEHDVVLLLTDLAFYLADYSFDSETVESFLRVPLNEIRLIKKGNFSTSRGNLSGFLSSRAVAKQFGFRIYSGNRAGADVASLSTDPTSPVLAPAVAPTSPERLPEIALGDAAGAGGMTQSPRPSPAAAAPAPAPSASPSAGRKAGLTFNSATAAFARLFGTSGSAAGVRRGSAGDLLATSPPSAGVALPSLAPPAQQSMGTPTPTPTQGSPQGASHHAVVATATVAGGVAVVSAHTSASSAPASHIDGAVHPTHPIPDVAVTAGDSVTPAAHVDGMHVHTVAATAHATATPAVATPAASPGSSTLAPVQSPSVRPRSGTKGSLIEHTLRVSVSRTSEDAKVVTDDICDKFAALGPKFGYTMTDGVLERGSNLLQTMNKIQSQIVSKIQSQMGSNRGQAASGANARAPPQSKLTSKSTEDVPSTDAPATAEAFHDVEL* # PASA_UPDATE: g12772.t1, single gene model update, valid-1, status:[pasa:asmbl_9192,status:3], valid-1 NODE_750_length_18155_cov_46.2017 . gene 5837 12116 . + . ID=g12772;Name=g12772.t1 NODE_750_length_18155_cov_46.2017 . mRNA 5837 12116 . + . ID=g12772.t1;Parent=g12772;Name=g12772.t1 NODE_750_length_18155_cov_46.2017 . five_prime_UTR 5837 6182 . + . ID=g12772.t1.utr5p1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 5837 6923 . + . ID=g12772.t1.exon1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 6183 6923 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 7006 7098 . + . ID=g12772.t1.exon2;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 7006 7098 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 7297 7358 . + . ID=g12772.t1.exon3;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 7297 7358 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 7532 7577 . + . ID=g12772.t1.exon4;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 7532 7577 . + 1 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 7778 7887 . + . ID=g12772.t1.exon5;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 7778 7887 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 8167 8315 . + . ID=g12772.t1.exon6;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 8167 8315 . + 1 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 8557 8671 . + . ID=g12772.t1.exon7;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 8557 8671 . + 2 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 8799 8898 . + . ID=g12772.t1.exon8;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 8799 8898 . + 1 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 9087 9185 . + . ID=g12772.t1.exon9;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 9087 9185 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 9386 9518 . + . ID=g12772.t1.exon10;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 9386 9518 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 9864 9952 . + . ID=g12772.t1.exon11;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 9864 9952 . + 2 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 10122 10238 . + . ID=g12772.t1.exon12;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 10122 10238 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 10402 10564 . + . ID=g12772.t1.exon13;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 10402 10564 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 10848 10954 . + . ID=g12772.t1.exon14;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 10848 10954 . + 2 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 11130 11245 . + . ID=g12772.t1.exon15;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 11130 11245 . + 0 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 11422 11565 . + . ID=g12772.t1.exon16;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 11422 11565 . + 1 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . exon 11825 12116 . + . ID=g12772.t1.exon17;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . CDS 11825 11945 . + 1 ID=cds.g12772.t1;Parent=g12772.t1 NODE_750_length_18155_cov_46.2017 . three_prime_UTR 11946 12116 . + . ID=g12772.t1.utr3p1;Parent=g12772.t1 #PROT g12772.t1 g12772 MRRFLRSAGLTFVDPASDSDESPETVRRNNARDDLAAARAELLGRDPRSTGTPRTVLSTAAGGSTSVNGGSNSHFGTSPQSQTPSPHAQSTRSSSRSQGSPGSGGGQRAQPSPPRSMPAASPTNTTSGASSSGQTSRRIRSPFGSPSSLQVDNVQCLCCGGSVPLPRMPPGRAACPVCQSTLSLDAYACFMSPAARVVTNVRHEHLSLDLLRNLAHASHISGDYAMLQNVLSDTFRSPELLNRSFLKAELADIDDCTLVDPGVDMDAVRKAFELVVLLPRHVHVGMLSSVHALVMEPRKPQHPCDLRFLMILLELPFFSETDAFDTFVRVLGLIGGLPNADHHHIVHWLKGYAECDFERLVNRIQKLLAVRVMTAVASLSAGRFLSDWRVIAATKTLALFYAANRMSTHPLVDVSIFYCKALQHIDVVRDYDAWQTGYRGFFFCQYSFLMPINAKMAILELDAQRQMNRELETAIVSSILRGVSVDPYLTLVIRRDHLIEDSLNQIAMRQQELKKKIRVKFQGEPGIDAGGLQKEWFLLLVREIFRPDFGMFTCDDDSRYVWFNPVSYESTSEYRLIGTLMGLAIYNGIILDLHFPPVCYKKLMGIAPSLADLSVSMPMLARGLQQLIDFDGDVEETFCRDFVVSLEQYGQVTQYPLKPGGDKIAVTAKNRQEYVSLYVEFILTRSIERQFAAFKDGFFSVCGGNAFSLFSAEEVERMVCGSTELDLNELSKVTEYEGFTRDNPTIKNFWEVVNAFPVEMKKKLLVFATGSDRVPVGGMAAMKFKITKAGPDSERLPVAHTCFNQICLCAYRTKEKLEDKLVVAITGSEGFGLK* # PASA_UPDATE: g12771.t1, single gene model update, valid-1, status:[pasa:asmbl_9190,status:12], valid-1 NODE_750_length_18155_cov_46.2017 . gene 108 5265 . - . ID=g12771;Name=g12771.t1 NODE_750_length_18155_cov_46.2017 . mRNA 108 5265 . - . ID=g12771.t1;Parent=g12771;Name=g12771.t1 NODE_750_length_18155_cov_46.2017 . five_prime_UTR 5229 5265 . - . ID=g12771.t1.utr5p1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 4959 5265 . - . ID=g12771.t1.exon1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 4959 5228 . - 0 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 3985 4709 . - . ID=g12771.t1.exon2;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 3985 4709 . - 0 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 3683 3822 . - . ID=g12771.t1.exon3;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 3683 3822 . - 1 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 3347 3458 . - . ID=g12771.t1.exon4;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 3347 3458 . - 2 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 3141 3222 . - . ID=g12771.t1.exon5;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 3141 3222 . - 1 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 2053 2876 . - . ID=g12771.t1.exon6;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 2053 2876 . - 0 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 880 1872 . - . ID=g12771.t1.exon7;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 880 1872 . - 1 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 536 617 . - . ID=g12771.t1.exon8;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 536 617 . - 1 ID=cds.g12771.t1;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . exon 108 178 . - . ID=g12771.t1.exon9;Parent=g12771.t1 NODE_750_length_18155_cov_46.2017 . CDS 108 178 . - 0 ID=cds.g12771.t1;Parent=g12771.t1;3_prime_partial=true #PROT g12771.t1 g12771 MVAVSTYCTSPLTRTVTLFIYFSWRLDPTIYCDKIVYLHTLCAALLVMERLRKSTASLFGGGARDTDQDVLRDTAATGRSVNANEPEANTTQAVMPQTAALPLVVVLTATAVKDAWEDYKRGKNDTMENARKCFVVTVTSEVAERTWADVAVGDIVRLVADDPVPADMLILATSDEDGECYIDTASLDGETNLKVREAHPLTADSGCDTAAGASRLRAAVEAEEPNNNLFRFQGTLNIGAGCEGDDGGFRGPIAMRHMLLRGCTLRNTEWVHGLVLYAGHDTKILRNDMRTRLKRSKVDSMVQNETLVVFIVLIGCCVFASVMSFVWENQHGQRQWPLANTDSPSLLGFINFWTFAIILQSMVPISLYVTVEMVKVFQAYFIGQDLEMYHAETDTPAVARTSSLSEELGQIEYIFSDKTGTLTMNSMVFAGCSIAGRPYALDEVPVGDEARAASACTAAMGDLTGSRRPLCTATRTGSDCSAAARARSLRAPFADRHFSFSDPNLMRDMLDNGMDDCVAFFTAIALCHTALPEKAATSRPGSGRSRGAGGRVAAKGNAAAIASIVAEGTITVDISDGSRVSLPQCDAESKLHISAPRSGLVGVIRDASCEAGSGIADDLPGYCQSLEGLRQEDSGLGLPDMVTLAHPYVHALTYQAQSPDEAALVSAARDFGVAFLGRTQSSATVNIRGRDVVYTLLNVLEFNSDRKRMSVIVRDPDSKRIVLVCKGADDVMVPLLRGGETDNKAVKDTVDITEEHLKAFARRGLRTLVIARREITDEAYALWSDKYMAATMAVDDREARVDEMAAEIEQKMELLGVTAVDDKLQEGVPDTIAALAMAGIRLWVLTGDKQETAVNVGHACRLLTDDMHVTFINAETSGDCARQLDAALARLDAARTSVELIRGCGAVDCGTPGLAKCGCTSRSLPDTDPSPGVSSPVDADCFKGVCDPARNALVIDGVSLQFALADDLQPVLMRLSDACASVVCCRCTPVQKAAVVQMVRHAKKAITLAIGDGGNDVGMLKAAEIGVGISGKEGMQAVMASDYAIAQFRFLKRLLLVHGRWSYKRISSMVLYFFYKNFVFISVNLWYGFFSGFSGQTVF # PASA_UPDATE: g12773.t1, single gene model update, valid-1, status:[pasa:asmbl_9191,status:12], valid-1 NODE_750_length_18155_cov_46.2017 . gene 12295 17917 . - . ID=g12773;Name=g12773.t1 NODE_750_length_18155_cov_46.2017 . mRNA 12295 17917 . - . ID=g12773.t1;Parent=g12773;Name=g12773.t1 NODE_750_length_18155_cov_46.2017 . five_prime_UTR 17859 17917 . - . ID=g12773.t1.utr5p1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 17646 17917 . - . ID=g12773.t1.exon1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 17646 17858 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 17186 17350 . - . ID=g12773.t1.exon2;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 17186 17350 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 16750 16938 . - . ID=g12773.t1.exon3;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 16750 16938 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 15209 16579 . - . ID=g12773.t1.exon4;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 15209 16579 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 14855 15060 . - . ID=g12773.t1.exon5;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 14855 15060 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 14536 14692 . - . ID=g12773.t1.exon6;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 14536 14692 . - 1 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 14057 14206 . - . ID=g12773.t1.exon7;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 14057 14206 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 13775 13867 . - . ID=g12773.t1.exon8;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 13775 13867 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 13476 13640 . - . ID=g12773.t1.exon9;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 13476 13640 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 12716 12820 . - . ID=g12773.t1.exon10;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 12716 12820 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . exon 12295 12516 . - . ID=g12773.t1.exon11;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . CDS 12403 12516 . - 0 ID=cds.g12773.t1;Parent=g12773.t1 NODE_750_length_18155_cov_46.2017 . three_prime_UTR 12295 12402 . - . ID=g12773.t1.utr3p1;Parent=g12773.t1 #PROT g12773.t1 g12773 MPAGMAAVADEKHCIEGQEDARALGNELFKKGDFQGAAASYTRAIESGSRKASAADVSVLHKNRAACHLKLGTFAAALDDCNTALLLTPNDAKGLFRRAQAYEGLDRITEAFEDLRLLVRVDPGNKEAVVATQRLAKMRSERAEAAVSTDSLSKELLGTLLSATADTAARVVAGNNLAVMAQSEGKADAITKTPGFEDIARLLSGTPEPSIAAAVLHLLASLASHKRWTAAVLHRVTVDRLVTLAVHPGDLGRAAVTLLARAFPLEGHNVLAKQAPPLVVDDRTADAVLDALLTVVARVRTAASSSIVSDIAINGIVRAVGREDVASRLLNRNGLKRLLEAASHVGPTVATDNGAPEAYTHLSLALSLLFESVRRKEEERFKTICADHVTELLDSETPESSLGALRALCCLLHGAAEVGQHVLSSGSNTDKLIVIARECGDGGLQQDARADKGEPADDEPSLSFGSAALCIAAAESLALAASDKKRCAVILEEGFDALKMLYKQRSHHVRCRALVGLCKIGSVGEGAPNQRMLAEGATLKLEKAARAFLVNGPDDARKWAIEGLAYLTLDGDVKEALVSDVPALRAMFAMVPAATGETAANARDQEKDRDGSEFRQAHADKALCYGLATVLVNLTNSGEKPPKDTQMEELRKIAKEKVPEPHPKDADEFVEKRVALALAHGIVHALVHLARIDSPVSAEMVSRVFLTLATNVQNRGILVQYGAAKALVPLALKGTPKGVLVATQALAKIAITTDPNLAFGTQKAADLIRPFVRLTSSESGLQQFEALMALTNLAGMSDEVRAKIIAEGGQKAMESLQFDDHELIQRGATEGLCNMLYFPDYYEEYVAKDGRCHDKVKLWVLLAGAEDEGTRRAASGGLAILSECAAGAQVIAEQKHTMEILKELAVLQNAELQHRSAHTLRNLVREVPAFADTLLDSQGLEVLTVLQQHALTPAARECATEALAMLQERGHIAPR* # ORIGINAL: g3034.t1 original gene structure, not modified by PASA NODE_4774_length_1254_cov_49.2926_potentialcontaminant AUGUSTUS gene 1 107 . - . ID=g3034;Name=g3034.t1 NODE_4774_length_1254_cov_49.2926_potentialcontaminant AUGUSTUS mRNA 1 107 . - . ID=g3034.t1;Parent=g3034;Name=g3034.t1 NODE_4774_length_1254_cov_49.2926_potentialcontaminant AUGUSTUS exon 1 107 . - . ID=g3034.t1.exon1;Parent=g3034.t1 NODE_4774_length_1254_cov_49.2926_potentialcontaminant AUGUSTUS CDS 1 107 . - 0 ID=cds.g3034.t1;Parent=g3034.t1 #PROT g3034.t1 g3034 MADVLHSVNQQIADIESLIGKLEEKIDKLEDKVVP # PASA_UPDATE: g9163.t1, single gene model update, valid-1, status:[pasa:asmbl_9017,status:3], valid-1 NODE_715_length_18742_cov_41.2898 . gene 8340 10860 . - . ID=g9163;Name=g9163.t1 NODE_715_length_18742_cov_41.2898 . mRNA 8340 10860 . - . ID=g9163.t1;Parent=g9163;Name=g9163.t1 NODE_715_length_18742_cov_41.2898 . five_prime_UTR 10801 10860 . - . ID=g9163.t1.utr5p1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . exon 10384 10860 . - . ID=g9163.t1.exon1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . CDS 10384 10800 . - 0 ID=cds.g9163.t1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . exon 9967 10173 . - . ID=g9163.t1.exon2;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . CDS 9967 10173 . - 0 ID=cds.g9163.t1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . exon 9634 9792 . - . ID=g9163.t1.exon3;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . CDS 9634 9792 . - 0 ID=cds.g9163.t1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . exon 8340 9391 . - . ID=g9163.t1.exon4;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . CDS 8768 9391 . - 0 ID=cds.g9163.t1;Parent=g9163.t1 NODE_715_length_18742_cov_41.2898 . three_prime_UTR 8340 8767 . - . ID=g9163.t1.utr3p1;Parent=g9163.t1 #PROT g9163.t1 g9163 MADSSKLQGKQPLALSERWAVDESLITPGGKEALRMLDDRQSVVGVIGLGYVGLPLCCAFADQGFKVIGFDIIANKVANLNKGISDVGDVSSEELATNIRDHKLEFTTDFSRIAELDTVSICVPTPLSKHRVPDLSFILSAMDPIERYGKKNQLIVLESTTYPGSTRDLVAERMSKRGFTIGQDLFVCFSPERIDPSNKNFNLRNTPKVIGGMTRTCMEVGRRLYEKIVVRVVPVSSTEEAEMVKLLENTFRAVNIALINELALMCDRMDVNIWNVVDAAKTKPFGFMPFYPGPGIGGHCIPLDPMYLSYTAKVYSHYNRFIELASDINENMPYFAVSKIGTVLNEEGRALKGSKVLLIGLAYKKNVSDKRESASIYVWRLLEKAGCVISYHDSFCPSHKELGVEHKSVEISKEEIKKHDIVVIVTDHDDVDYSLLLAESLCIFDSRNAIGGRGLYRPGEVPANVHLL* # PASA_UPDATE: g9165.t1, single gene model update, valid-1, status:[pasa:asmbl_9016,status:12], valid-1 NODE_715_length_18742_cov_41.2898 . gene 13710 18086 . + . ID=g9165;Name=g9165.t1 NODE_715_length_18742_cov_41.2898 . mRNA 13710 18086 . + . ID=g9165.t1;Parent=g9165;Name=g9165.t1 NODE_715_length_18742_cov_41.2898 . five_prime_UTR 13710 13802 . + . ID=g9165.t1.utr5p1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 13710 13826 . + . ID=g9165.t1.exon1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 13803 13826 . + 0 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 13947 14110 . + . ID=g9165.t1.exon2;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 13947 14110 . + 0 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 14447 14511 . + . ID=g9165.t1.exon3;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 14447 14511 . + 1 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 14753 14900 . + . ID=g9165.t1.exon4;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 14753 14900 . + 2 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 15282 15424 . + . ID=g9165.t1.exon5;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 15282 15424 . + 1 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 15644 15864 . + . ID=g9165.t1.exon6;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 15644 15864 . + 2 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 16182 16264 . + . ID=g9165.t1.exon7;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 16182 16264 . + 0 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 16445 16517 . + . ID=g9165.t1.exon8;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 16445 16517 . + 1 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . exon 16730 18086 . + . ID=g9165.t1.exon9;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . CDS 16730 16894 . + 0 ID=cds.g9165.t1;Parent=g9165.t1 NODE_715_length_18742_cov_41.2898 . three_prime_UTR 16895 18086 . + . ID=g9165.t1.utr3p1;Parent=g9165.t1 #PROT g9165.t1 g9165 MRGLRGQEPYTLFCVPQQTRISLSVKWTELGHECIVRDTAATQTLSRIRRHVDGLALRPEVARMRANVSGLRSAVEALQLLKDKERKELTLLKASLVARESALETERIRLVAARAKAGHERTSFAADIAEKRRRLVALQHEVMNMRRVKTNDLLSVFPVNPSSETHCRILTIVLPNHGGYSAVPPEHLSAAMCHTAQVVSHLSRILDVWIPQDYSYIEFCGVDGDGGSFMTRPLARMSESISKLNAAIASLCASQGQAVRGSAAVSQTLKNLVACTRSPLLGRDGPFATYLKEMLPSNGSRKGTLCEAPIEELVDSDEEGLDEWETVDSADATDPLEHPSGSASAAAVAMAINSAMAGSIS* # ORIGINAL: g9161.t1 original gene structure, not modified by PASA NODE_715_length_18742_cov_41.2898 AUGUSTUS gene 218 4458 . + . ID=g9161;Name=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS mRNA 218 4458 . + . ID=g9161.t1;Parent=g9161;Name=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 218 335 . + . ID=g9161.t1.exon1;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 218 335 . + 2 ID=cds.g9161.t1;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 522 742 . + . ID=g9161.t1.exon2;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 522 742 . + 1 ID=cds.g9161.t1;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 1010 1216 . + . ID=g9161.t1.exon3;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 1010 1216 . + 2 ID=cds.g9161.t1;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 1436 4458 . + . ID=g9161.t1.exon4;Parent=g9161.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 1436 4458 . + 2 ID=cds.g9161.t1;Parent=g9161.t1 #PROT g9161.t1 g9161 VDGNPKAIFKAYGTQSGAYFGWKVLLADVVATAADFNKKLADVVVSAPLESATLGSSSAVSAEVGCIYVYLGSGLPSGPFVPHLQRICGTDAGGRFGYSMAPLGDVDLDGLEDFAVGAPFSPNSNGDLNAGCVHIFFGRKVSLPTVADQVICGRTPNARYGMSMAGGIDLTKMDGFDQSYNDIVIGSIGERLIRVFRAKAVAKLRLSASSNLGVRVWDGKSTSFTFTVANDGPSAAARVIVDYTVRYTCGNQTGLCRPETGTVALPSIDVGTTRSNTFTVARTYTSSCCDLVLSAELSDRNAGAEMVIARDSLRVLSPPLKLSGCANTTNTPLSACATAELSLKDLVVHPEPAILGSIVTVRGTVSLDSFRNIGDSVGRVYVSLRVPAGMAVSTDSSSNVDCRVADAKAAASLGDSATLNVGLGAGIVAYECYLQSEPSAARRLLPFEVAFDTTKSNYQLREIAVDAMLVAPVYETRLDDNSARAVASVLNARVVLSTVTPASRVVSNNPFTFVAMATNKGGRAASGIAVTVMFPASDAFLGAVGVDGGSCGGMDASGSIVCAADSIAPGASLVVRVSGIPRGSTTRDGLIGCSARITGDVDGVADASASASQASVERTLPKVGSSATRSTDDSDVGWALFVGVFCGIVFLVLFYVGMHFLGILTRRPSPPWELLFPPEEIAKDEERRRQKEEAKRAAKEAEMERKAKLLAEKRRGSDTDYGVGVSHIVTEAGTSLAMPAGTLVRRFSISGLPSAVVASGAEDPLKPRLRASSSVPDFVTMFAPPKTKGKGPAAAAEKRGSAAPLLSKAAEPAKLSSSSSSAPAKKETEQVQKKEPIANAYEEIDPSTAPPAMAPPKGPAPPLPASVVAVTAASELSPGSRKQVSFKGTIKESTGKKLFPKEGKEPVPDEHEPPVDEESVSEDESPAGSDAEEAKASPAVPAVPVIVLEESASTEIDRALKLKAEEMDGGRDRTNTEQFGTAARSAVKEFKISMAALDTLDAALSDMPGSSPAASVSRATGAAVAAPALSAAAVAEKLAKEEKVEADGKQEKASPDAPPTEYASVASSKGLELKKRPEYEELEPPPLDYALLDVADKDKAEAAPAKDTAPPPLAASGPPPPPAPPVVSEPPPPPAPPAVSGPPPPPAPPAASGPPPPPAPPAVSGPPPPPAPPASSGPPPPPPPPPMK* # ORIGINAL: g9162.t1 original gene structure, not modified by PASA NODE_715_length_18742_cov_41.2898 AUGUSTUS gene 6202 8062 . + . ID=g9162;Name=g9162.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS mRNA 6202 8062 . + . ID=g9162.t1;Parent=g9162;Name=g9162.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 6202 7292 . + . ID=g9162.t1.exon1;Parent=g9162.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 6202 7292 . + 0 ID=cds.g9162.t1;Parent=g9162.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 7456 8062 . + . ID=g9162.t1.exon2;Parent=g9162.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 7456 8062 . + 1 ID=cds.g9162.t1;Parent=g9162.t1 #PROT g9162.t1 g9162 MLSFRPLPRLRLRPTGRVTVYVLWALLFVSCARVIFYRAQPNSPNTLVAPDDVADSGTSADELPALDLDRANGGIDRIPAARHAHQRMGINAPRQVKLAPFELRDSTTLRHQRLWKIISDSFKEKERIAANDKGPPVHDVAMQGESGGNAASANAEDKKFHGPHLGPPLLNLSVTELANGLTLLPDDVVVCISATEEKIDAIARVRAAWAGPAVVGMYCRDFACVDGVYDALPQLLGHTHNTAVVVVLGDRGSMYPLNAMRNIVADYVPGGQGYGVFTLDADMLLSEGAYELVRRAYVDAKHTRNPREPRLLVVPCFEFGADSYDVTAAAERNQSIPRTKNELIVAGRRWIRPSKIKYYPQGQSCTEYKRWFLGNDVSPWKQTTFNWEYEPFFIVNKTASLPGYDEYYVFYGGDKQSYSLLLWAAGCRFYTIPNVFSVHMPHPDRRRTATTEEDVQLDANRRYFMDFRTEIGVRFHIPIDKFEYKMVGMPSFKQLKQQPPPKQWLPPGIVKPVGNARPAGRLGAPAVDRRDGAVNAVGVRRDGDGGGEEALRRREALQPRRGRAP* # PASA_UPDATE: g9164.t1, single gene model update, valid-1, status:[pasa:asmbl_9015,status:3], valid-1 NODE_715_length_18742_cov_41.2898 . gene 11555 13287 . + . ID=g9164;Name=g9164.t1 NODE_715_length_18742_cov_41.2898 . mRNA 11555 13287 . + . ID=g9164.t1;Parent=g9164;Name=g9164.t1 NODE_715_length_18742_cov_41.2898 . five_prime_UTR 11555 11616 . + . ID=g9164.t1.utr5p1;Parent=g9164.t1 NODE_715_length_18742_cov_41.2898 . exon 11555 12627 . + . ID=g9164.t1.exon1;Parent=g9164.t1 NODE_715_length_18742_cov_41.2898 . CDS 11617 12627 . + 0 ID=cds.g9164.t1;Parent=g9164.t1 NODE_715_length_18742_cov_41.2898 . exon 12795 13287 . + . ID=g9164.t1.exon2;Parent=g9164.t1 NODE_715_length_18742_cov_41.2898 . CDS 12795 13166 . + 0 ID=cds.g9164.t1;Parent=g9164.t1 NODE_715_length_18742_cov_41.2898 . three_prime_UTR 13167 13287 . + . ID=g9164.t1.utr3p1;Parent=g9164.t1 #PROT g9164.t1 g9164 MMATRAPALVSALLILCISAHVATAAVYSILDYGAIPNDYSSHAAETNSMAIKKALYAANMTDPSDRERVALVPESAKFYIVNTTVIGLTWITLRVDGTLILSDNRTLWAQDGGDTGRLSSLYFEDIVGLTITGNGVIDGQGYNWWWHVILTGEDNRPSLIYLQECTDIVVTDIRMRDSPLYHLYMNDIARAHVRNVDIRVDVTKQRELLGAHGLLGDFGIPTFPLNTDGIDPAGIDVLIENVTIVNFDDAVAVKPSRQGRRYSSCSSNITVRDAYVEWGVGMTIGSVPPNPGVNCVRNVTFERIRFKNALKAIYIKSNPGTAGTGIIDDITYRDIRVEGSLWYPIFIGPQQQKQPHSSGTGCSFFYPIVKECPTQPRVAMSNIHLENVELTGGLLLPGVILCNATQPCTGFTFKNVTNTGTFLVQKNYVCENVVASTSDNSKPSIPCFTELPHNKRDEE* # ORIGINAL: g9166.t1 original gene structure, not modified by PASA NODE_715_length_18742_cov_41.2898 AUGUSTUS gene 17137 18595 . - . ID=g9166;Name=g9166.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS mRNA 17137 18595 . - . ID=g9166.t1;Parent=g9166;Name=g9166.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 18201 18595 . - . ID=g9166.t1.exon1;Parent=g9166.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 18201 18595 . - 0 ID=cds.g9166.t1;Parent=g9166.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS exon 17137 17977 . - . ID=g9166.t1.exon2;Parent=g9166.t1 NODE_715_length_18742_cov_41.2898 AUGUSTUS CDS 17137 17977 . - 1 ID=cds.g9166.t1;Parent=g9166.t1 #PROT g9166.t1 g9166 SEYLFNTLDALVAGCLRGEIDRGFVTIVVFIADERTDAAAELSASLRERYARLVGSGSLDIVRALPSFYPPLSADELPQNYGDPPARRRWRAKQCVDYALMMRYAVVTHAPTHYLQLEDDVISDKGWYETMRHIVDNESRPWIVLNFSPHGFIGKLFRARDASEFAAFSARFYREHPVDLLLYLWQFVRYQFKGVDEARLFRHIGQESSLEGKTQLVEGDGEVANDAAAASADDATGKARYANGNPSVTVVCKAKGRFVGTGDALYRGEGMLRIRDGVPGDHCRFRFAKPHMISDISVWTGTTVPSADSATGEGREKRADTVKDIQGAGDAGNTADMPPVPITVGRMSGAAVMVSMDGQRYERAAGFNAAGVATAKYFPSTPVVAFKLVLEGTMDADTEFVVTQVVVGTSD* # PASA_UPDATE: g7669.t1, single gene model update, valid-1, status:[pasa:asmbl_7868,status:12], valid-1 NODE_5104_length_1020_cov_439.183 . gene 2 1020 . + . ID=g7669;Name=g7669.t1 NODE_5104_length_1020_cov_439.183 . mRNA 2 1020 . + . ID=g7669.t1;Parent=g7669;Name=g7669.t1 NODE_5104_length_1020_cov_439.183 . five_prime_UTR 2 3 . + . ID=g7669.t1.utr5p1;Parent=g7669.t1 NODE_5104_length_1020_cov_439.183 . exon 2 1020 . + . ID=g7669.t1.exon1;Parent=g7669.t1 NODE_5104_length_1020_cov_439.183 . CDS 4 1020 . + 0 ID=cds.g7669.t1;Parent=g7669.t1;5_prime_partial=true;3_prime_partial=true #PROT g7669.t1 g7669 VAFEEGQTEAVISIGVTADEVPELDDAFSVTLTEIVGGARLDRATSQSIVTIVESDDARGVFRFADGQATLSVPEEEDSTGAGSKVVLRVVRERGSFFEQTVSWTSSGNAGQYTPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSLSQRVSEEDVDGKGSVVALLIVRTGGAFTEQTVSWTTEGPAGQFSPTSGSVSFGDGIVEMTVLISVLADDVPELDQTVAFGLTEVVGGGRIDENGVAGAFTILENDDATGVFGFAAESAAVSVSEEDVKGAGSVVQLRVVRQRGTFSAEIIS # PASA_UPDATE: g9515.t1, single gene model update, valid-1, status:[pasa:asmbl_7737,status:12], valid-1 NODE_493_length_22529_cov_36.4125 . gene 6876 8745 . - . ID=g9515;Name=g9515.t1 NODE_493_length_22529_cov_36.4125 . mRNA 6876 8745 . - . ID=g9515.t1;Parent=g9515;Name=g9515.t1 NODE_493_length_22529_cov_36.4125 . exon 8116 8745 . - . ID=g9515.t1.exon1;Parent=g9515.t1 NODE_493_length_22529_cov_36.4125 . CDS 8116 8745 . - 0 ID=cds.g9515.t1;Parent=g9515.t1 NODE_493_length_22529_cov_36.4125 . exon 6876 7963 . - . ID=g9515.t1.exon2;Parent=g9515.t1 NODE_493_length_22529_cov_36.4125 . CDS 6962 7963 . - 0 ID=cds.g9515.t1;Parent=g9515.t1 NODE_493_length_22529_cov_36.4125 . three_prime_UTR 6876 6961 . - . ID=g9515.t1.utr3p1;Parent=g9515.t1 #PROT g9515.t1 g9515 MASFNSLPPEIVVDRIVPFLGCADVAVLAQVNRTLRAHLWRVRVVHLRSPFLEKYLDSRAFRAKFASFLPVDRLYLKTQGSPEPLTDLAAFAGVHTADLVSGPVIGTTDLSPLCGVHSVTLWFNLDITPIIDLTPLSQAHSLSIGGVSDRVAILPIANVPRIHFMTFECVDLSPLQNHRPLSVRIDNGNGHLADVSALSCAKEVFIAVCKDIVDYSPLSLIRSVTLGPHDATTLPHALGSVHTLILEEWRYLRDVSVVRSVHTLIAASSCLADVSSLRGVHTLQCRINNIDISPLQSAHALYLDGINVRGLSSLGHVHTLEFQGDPVDKADFLALGGVRHLSIVQSDQLAYVSHLRDVQKLSIYHCHRVADVSSLGGLYWLRIWSRALRDVSSLGRVHTLDLSNCVSISDVSALTSVHTLSLEGCTHVQDVSCLGGVYNLNLNRTSVSDVSALGRVRILSLAECPIEDVSSLGAVHELNISYCRQVRDCSALGRVHTLNLSGTAVVDVSALGGVHTLDISFSLAVDVSALGRVRLKKNWGGRC* # PASA_UPDATE: g9513.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7734,status:3], valid-1 # PASA_UPDATE: g9513.t1, single gene model update, valid-1, status:[pasa:asmbl_7733,status:3], valid-1 NODE_493_length_22529_cov_36.4125 . gene 1900 3547 . + . ID=g9513;Name=g9513.t1 NODE_493_length_22529_cov_36.4125 . mRNA 1900 3547 . + . ID=g9513.t1.1.5b6be70c;Parent=g9513;Name=g9513.t1 NODE_493_length_22529_cov_36.4125 . five_prime_UTR 1900 2062 . + . ID=g9513.t1.1.5b6be70c.utr5p1;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . exon 1900 2225 . + . ID=g9513.t1.1.5b6be70c.exon1;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . CDS 2063 2225 . + 0 ID=cds.g9513.t1.1.5b6be70c;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . exon 2458 2520 . + . ID=g9513.t1.1.5b6be70c.exon2;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . CDS 2458 2520 . + 2 ID=cds.g9513.t1.1.5b6be70c;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . exon 2700 2888 . + . ID=g9513.t1.1.5b6be70c.exon3;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . CDS 2700 2888 . + 2 ID=cds.g9513.t1.1.5b6be70c;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . exon 3053 3199 . + . ID=g9513.t1.1.5b6be70c.exon4;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . CDS 3053 3195 . + 2 ID=cds.g9513.t1.1.5b6be70c;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . exon 3301 3547 . + . ID=g9513.t1.1.5b6be70c.exon5;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . three_prime_UTR 3196 3199 . + . ID=g9513.t1.1.5b6be70c.utr3p1;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . three_prime_UTR 3301 3547 . + . ID=g9513.t1.1.5b6be70c.utr3p2;Parent=g9513.t1.1.5b6be70c NODE_493_length_22529_cov_36.4125 . mRNA 1900 3547 . + . ID=g9513.t1;Parent=g9513;Name=g9513.t1 NODE_493_length_22529_cov_36.4125 . five_prime_UTR 1900 2062 . + . ID=g9513.t1.utr5p1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . exon 1900 2225 . + . ID=g9513.t1.exon1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . CDS 2063 2225 . + 0 ID=cds.g9513.t1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . exon 2458 2520 . + . ID=g9513.t1.exon2;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . CDS 2458 2520 . + 2 ID=cds.g9513.t1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . exon 2700 2888 . + . ID=g9513.t1.exon3;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . CDS 2700 2888 . + 2 ID=cds.g9513.t1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . exon 3053 3191 . + . ID=g9513.t1.exon4;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . CDS 3053 3191 . + 2 ID=cds.g9513.t1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . exon 3301 3547 . + . ID=g9513.t1.exon5;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . CDS 3301 3469 . + 1 ID=cds.g9513.t1;Parent=g9513.t1 NODE_493_length_22529_cov_36.4125 . three_prime_UTR 3470 3547 . + . ID=g9513.t1.utr3p1;Parent=g9513.t1 #PROT g9513.t1.1.5b6be70c g9513 MAYINCQSVTGMVLLLICVGMMIALQVYDYVYVFKRLPRYNSAGTNVTYIDVYFGFWETCFAAHNKGFGLCILYDPTDKDTYEVVQQSNIEQTQNAGRAGIAIADACLLASIFAAIVGIATFHRVRGFRAAAALVGIASTTEIVAIGTWFGASFESFDLIRQKIADNYKGSNRAAVTADLDGASK* #PROT g9513.t1 g9513 MAYINCQSVTGMVLLLICVGMMIALQVYDYVYVFKRLPRYNSAGTNVTYIDVYFGFWETCFAAHNKGFGLCILYDPTDKDTYEVVQQSNIEQTQNAGRAGIAIADACLLASIFAAIVGIATFHRVRGFRAAAALVGIASTTEIVAIGTWFGASFESFDLIRQKIADNYKGSNRAAVTADLDGASNEMGASFALLVCAAAIGIVVGIIFNRASRAPSDEGSVRREFDDQSTSQGVLMYERE* # PASA_UPDATE: g9518.t1, single gene model update, valid-1, status:[pasa:asmbl_7736,status:12], valid-1 NODE_493_length_22529_cov_36.4125 . gene 17728 21656 . + . ID=g9518;Name=g9518.t1 NODE_493_length_22529_cov_36.4125 . mRNA 17728 21656 . + . ID=g9518.t1;Parent=g9518;Name=g9518.t1 NODE_493_length_22529_cov_36.4125 . five_prime_UTR 17728 17866 . + . ID=g9518.t1.utr5p1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 17728 17940 . + . ID=g9518.t1.exon1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 17867 17940 . + 0 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 18185 18321 . + . ID=g9518.t1.exon2;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 18185 18321 . + 1 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 18718 18747 . + . ID=g9518.t1.exon3;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 18718 18747 . + 2 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 19132 19173 . + . ID=g9518.t1.exon4;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 19132 19173 . + 2 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 19358 19398 . + . ID=g9518.t1.exon5;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 19358 19398 . + 2 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 19579 19646 . + . ID=g9518.t1.exon6;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 19579 19646 . + 0 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 20101 20158 . + . ID=g9518.t1.exon7;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 20101 20158 . + 1 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 20376 20425 . + . ID=g9518.t1.exon8;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 20376 20425 . + 0 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 20548 20615 . + . ID=g9518.t1.exon9;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 20548 20615 . + 1 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . exon 21036 21656 . + . ID=g9518.t1.exon10;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . CDS 21036 21160 . + 2 ID=cds.g9518.t1;Parent=g9518.t1 NODE_493_length_22529_cov_36.4125 . three_prime_UTR 21161 21656 . + . ID=g9518.t1.utr3p1;Parent=g9518.t1 #PROT g9518.t1 g9518 MQSTRCITQFHEWGRKIVGVARNYEAHAAAGGNVIPNEPIIFMKPPTAYTTSESGGVIELPADRDELFVEVELGVVIGTTGKAIRQDIADAHIAGYVVAIDMTDRHDVPRLLQEGLPWDIGKGQDTFCPVSNFVSKHDAGNIMDMRLWLTINGVVAQEGLVSNMKFSIPFLFEFTSANMTLEAGDLYLTGTPGGITPVRNGDNIVAGIDGTNGIIVKSTFVVRRRIPSPS* # PASA_UPDATE: g9516.t1, single gene model update, valid-1, status:[pasa:asmbl_7735,status:3], valid-1 NODE_493_length_22529_cov_36.4125 . gene 8996 13650 . + . ID=g9516;Name=g9516.t1 NODE_493_length_22529_cov_36.4125 . mRNA 8996 13650 . + . ID=g9516.t1;Parent=g9516;Name=g9516.t1 NODE_493_length_22529_cov_36.4125 . five_prime_UTR 8996 9084 . + . ID=g9516.t1.utr5p1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 8996 9269 . + . ID=g9516.t1.exon1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 9085 9269 . + 0 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 9484 9577 . + . ID=g9516.t1.exon2;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 9484 9577 . + 1 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 9875 9997 . + . ID=g9516.t1.exon3;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 9875 9997 . + 0 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 10376 10511 . + . ID=g9516.t1.exon4;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 10376 10511 . + 0 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 10726 10808 . + . ID=g9516.t1.exon5;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 10726 10808 . + 2 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 11071 11196 . + . ID=g9516.t1.exon6;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 11071 11196 . + 0 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 11442 11488 . + . ID=g9516.t1.exon7;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 11442 11488 . + 0 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 11785 11936 . + . ID=g9516.t1.exon8;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 11785 11936 . + 1 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 12184 12298 . + . ID=g9516.t1.exon9;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 12184 12298 . + 2 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 12549 12689 . + . ID=g9516.t1.exon10;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 12549 12689 . + 1 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 12809 12933 . + . ID=g9516.t1.exon11;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 12809 12933 . + 1 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . exon 13346 13650 . + . ID=g9516.t1.exon12;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . CDS 13346 13398 . + 2 ID=cds.g9516.t1;Parent=g9516.t1 NODE_493_length_22529_cov_36.4125 . three_prime_UTR 13399 13650 . + . ID=g9516.t1.utr3p1;Parent=g9516.t1 #PROT g9516.t1 g9516 MAASATARPLVSIVNFYVYNPDFGTTEETEEEKLLYYYPRDTPIDTKIKHVGLSEALVKFTSTFSEAQPCEIVRTLKTRQSFLNPEGNFWAVLTLTVPTVARQNKDGDAIAYEDEDLHDIIVRNQLLQLYRTFKLLNGSLTYILESFNLKTVRDKLDSFYSQHLPSLRVDPLEVQSTFGGIHFLPLDRNSYLRIQCFIAQTESNLPQIVHTVFLYGDHLVYSGLEQDDMRIIYRYLTSAGFLTPLFSDQPASTRTSASPMPAHVRTGFLIGPENPSDSESPINSPRVYVDGRSESDPLHLVMYHIAGACLCCLVEARVVTDLSFYRRFEAAVNAPLRSIATQVAEQTVQRKNVTTEPQYRYVYFNHMNLALKTSAMTGRARALMAPEVMRTITDMHADFEKKDSGEIIVKGLSDTWVIGKKSEQREVFVVITQKNANLIEINDEVNKLNAAYFNNIFMD* # ORIGINAL: g9514.t1 original gene structure, not modified by PASA NODE_493_length_22529_cov_36.4125 AUGUSTUS gene 5745 6725 . + . ID=g9514;Name=g9514.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS mRNA 5745 6725 . + . ID=g9514.t1;Parent=g9514;Name=g9514.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS exon 5745 6725 . + . ID=g9514.t1.exon1;Parent=g9514.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS CDS 5745 6725 . + 0 ID=cds.g9514.t1;Parent=g9514.t1 #PROT g9514.t1 g9514 MDPISVVQNIYTIGKWVYDQKKAADGVKGQLLIFSRRMNTLMSAVKVLEDSINAGEIADNRLEAIREPLAALLATLQLFKTKAERQAKRKSVVSFFIAGFDEEEIRSLLDTLNDNLQDFQLALGIISNIPGTKQQGTDDVWSNLENMRGYTFADGELVALASQKMQQDHELQKLKAEQAHSIGRRNVALKEIAAKTAAEKESVEIERLKNKNEVAMQLELAKIENIKHMSDRGTMQATNNEIVRQQRLMADLPDGYLRCNGCGGKGLYSLDYDKSKCLMGAMVAVCTMGFGLLCAPCICQCHRSATCDGCNQKIQAPYNILSCLQK* # ORIGINAL: g9517.t1 original gene structure, not modified by PASA NODE_493_length_22529_cov_36.4125 AUGUSTUS gene 15945 16540 . + . ID=g9517;Name=g9517.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS mRNA 15945 16540 . + . ID=g9517.t1;Parent=g9517;Name=g9517.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS exon 15945 16044 . + . ID=g9517.t1.exon1;Parent=g9517.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS CDS 15945 16044 . + 0 ID=cds.g9517.t1;Parent=g9517.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS exon 16374 16540 . + . ID=g9517.t1.exon2;Parent=g9517.t1 NODE_493_length_22529_cov_36.4125 AUGUSTUS CDS 16374 16540 . + 2 ID=cds.g9517.t1;Parent=g9517.t1 #PROT g9517.t1 g9517 MTKERFIGTMSNKLSVVSNDEDVRQTFLAFDFDCTGFISFANLRKAFRMVAPHMSDEAIAGAFAEIDRDGDGRVGYREFRRMMHGNAY* # ORIGINAL: g8783.t1 original gene structure, not modified by PASA NODE_1962_length_8321_cov_58.4921 AUGUSTUS gene 251 3452 . + . ID=g8783;Name=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS mRNA 251 3452 . + . ID=g8783.t1;Parent=g8783;Name=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 251 319 . + . ID=g8783.t1.exon1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 251 319 . + 0 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 631 823 . + . ID=g8783.t1.exon2;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 631 823 . + 0 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 1247 1426 . + . ID=g8783.t1.exon3;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 1247 1426 . + 2 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 1710 1760 . + . ID=g8783.t1.exon4;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 1710 1760 . + 2 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 2123 2277 . + . ID=g8783.t1.exon5;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 2123 2277 . + 2 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 2689 2795 . + . ID=g8783.t1.exon6;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 2689 2795 . + 0 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 2905 3016 . + . ID=g8783.t1.exon7;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 2905 3016 . + 1 ID=cds.g8783.t1;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS exon 3438 3452 . + . ID=g8783.t1.exon8;Parent=g8783.t1 NODE_1962_length_8321_cov_58.4921 AUGUSTUS CDS 3438 3452 . + 0 ID=cds.g8783.t1;Parent=g8783.t1 #PROT g8783.t1 g8783 EEERAKDILKLLDQLALTIEVLKETRLGVTVNGLRKKSKNETITRMTKALVAKWKRLLDGEDAPTSQSQSQSQSQSQSQSQSDAASQDADAPKQRDVAKAETPKDNAKSQSQSAALNRRLSVEPTKDITRDKCRELLANALQKRDGEANEPYLDPFDLAAQIESLLFEEFKGTNDKYKTRIRSRIQNLKDARNPNLRIRLLMGDISPTEFATMTADQMASESLKELRSKYEKEALDSYAKAQGTMVKTTQFRCGKCGKRDASYFQMQTRSADEPMTTFMTCNLCGNNWKYITF* # PASA_UPDATE: g8785.t1, single gene model update, valid-1, status:[pasa:asmbl_3120,status:12], valid-1 NODE_1962_length_8321_cov_58.4921 . gene 6666 7898 . + . ID=g8785;Name=g8785.t1 NODE_1962_length_8321_cov_58.4921 . mRNA 6666 7898 . + . ID=g8785.t1;Parent=g8785;Name=g8785.t1 NODE_1962_length_8321_cov_58.4921 . five_prime_UTR 6666 6734 . + . ID=g8785.t1.utr5p1;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . exon 6666 6738 . + . ID=g8785.t1.exon1;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . CDS 6735 6738 . + 0 ID=cds.g8785.t1;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . exon 6989 7322 . + . ID=g8785.t1.exon2;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . CDS 6989 7322 . + 2 ID=cds.g8785.t1;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . exon 7673 7898 . + . ID=g8785.t1.exon3;Parent=g8785.t1 NODE_1962_length_8321_cov_58.4921 . CDS 7673 7898 . + 1 ID=cds.g8785.t1;Parent=g8785.t1;3_prime_partial=true #PROT g8785.t1 g8785 MATNVTCHVPYTGVFCDETWARYAGLTYVGVWIVTVVLTILLILAILLVGFKIISAKGWRPIDLQKTILYLNVAILATFIVRCVDPYAFNDVLPYWLGQLMTDMGTTGCYSIVLSVIENWFEIVCKATGKGKKFLPVAVGFYRASILTIFCVCFVCAIGEAESTNAWQFRAAKFFVLSFVFVLWIFAQ # PASA_UPDATE: g8784.t1, single gene model update, valid-1, status:[pasa:asmbl_3121,status:3], valid-1 NODE_1962_length_8321_cov_58.4921 . gene 3610 6098 . - . ID=g8784;Name=g8784.t1 NODE_1962_length_8321_cov_58.4921 . mRNA 3610 6098 . - . ID=g8784.t1;Parent=g8784;Name=g8784.t1 NODE_1962_length_8321_cov_58.4921 . five_prime_UTR 6024 6098 . - . ID=g8784.t1.utr5p1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 5964 6098 . - . ID=g8784.t1.exon1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 5964 6023 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 5579 5761 . - . ID=g8784.t1.exon2;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 5579 5761 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 5336 5410 . - . ID=g8784.t1.exon3;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 5336 5410 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 5062 5130 . - . ID=g8784.t1.exon4;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 5062 5130 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 4582 4764 . - . ID=g8784.t1.exon5;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 4582 4764 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . exon 3610 4055 . - . ID=g8784.t1.exon6;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . CDS 3984 4055 . - 0 ID=cds.g8784.t1;Parent=g8784.t1 NODE_1962_length_8321_cov_58.4921 . three_prime_UTR 3610 3983 . - . ID=g8784.t1.utr3p1;Parent=g8784.t1 #PROT g8784.t1 g8784 MGCGMGFLRVVLFTFNFLFWGLGGALVGIVAWFMVKNKDYKSLFGSTNIVIGLLVLGSFVFLIGFLGCCGAAKKNKKMLQAYVGIVTIIFIAEVVIAILVYVKRNDVNDALQTNWLKANNQTRDAFQHNFKCCGFNANVTAPTDNDSSCYVDYNTSGIKYTATCYTKLKDFITKHLIPIASVGISVAAMQIFGIIFSGCIIHDIKKGSEVKAY* # ORIGINAL: g3024.t1 original gene structure, not modified by PASA NODE_21331_length_133_cov_285.897_potentialcontaminant AUGUSTUS gene 2 133 . + . ID=g3024;Name=g3024.t1 NODE_21331_length_133_cov_285.897_potentialcontaminant AUGUSTUS mRNA 2 133 . + . ID=g3024.t1;Parent=g3024;Name=g3024.t1 NODE_21331_length_133_cov_285.897_potentialcontaminant AUGUSTUS exon 2 133 . + . ID=g3024.t1.exon1;Parent=g3024.t1 NODE_21331_length_133_cov_285.897_potentialcontaminant AUGUSTUS CDS 2 133 . + 2 ID=cds.g3024.t1;Parent=g3024.t1 #PROT g3024.t1 g3024 LRGPCGQAHPCRDADSGGADCRKRRDHQEVRGDPQDDPGRKRR # ORIGINAL: g6396.t1 original gene structure, not modified by PASA NODE_2834_length_5012_cov_49.6326 AUGUSTUS gene 1021 5000 . - . ID=g6396;Name=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS mRNA 1021 5000 . - . ID=g6396.t1;Parent=g6396;Name=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS exon 3282 5000 . - . ID=g6396.t1.exon1;Parent=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS CDS 3282 5000 . - 0 ID=cds.g6396.t1;Parent=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS exon 1574 2057 . - . ID=g6396.t1.exon2;Parent=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS CDS 1574 2057 . - 0 ID=cds.g6396.t1;Parent=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS exon 1021 1448 . - . ID=g6396.t1.exon3;Parent=g6396.t1 NODE_2834_length_5012_cov_49.6326 AUGUSTUS CDS 1021 1448 . - 2 ID=cds.g6396.t1;Parent=g6396.t1 #PROT g6396.t1 g6396 MASVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSPLHTHLRHVRLFHLWPMYNRKYIEDVQFRDEVRATIPVDRLVLVSFDGDSQDLSAFKGVHSALFLVRSRTGSTCKASDLSPLKGVNTVELSFHSKSPDFLTPLADAQVVRITESNCFIRVPAFRKAKSVDVCNGWLDLNDLIGIPRVRLVGGYTAPGTGIQDISPLRLARFVELRDVEKLEDLSCLENARELVIHDCPRIVTLPPATHLRAFTWHRSPLTAIPPEFGGLRFLDLSSSRDLEDVSAAGNVHELILHHCFSLKDVSALGSVHTLRISRIIAVLDVSALSRVHTLEFDDVDLVGVAKLAGVHYLSLSSVRFDIQEISQLGTVHTLRLPFVAIEDVSTLRGVHTLLFFRNQRIGDVSALGNCHKLELIECPVSDVSMLGRVHTLNLESTNVSDVSMLGDVHTLNLCGCKKVVDVSALGSVHDLNLRGCTSVSDVSMLFAVHTLNISACPITHDISMLADVHTLIMACCPISDVSALGRVHTLDLSECKLITDVSALGGVHTLILNRTPISDISGLIGYGRVRVLRVVGCPNALECSKASDLSPLKGVNTVELSFHSKSPDFLTPLADAQVVRITEINCFIRVRALRKAKSVDIRNGRLDLNDLTGIPRVTLGGGYTEPGTRFQDVSPLRLARYVELRSQEELEDLSCLENAREVVIHDCPRIVTLPPATYLRAFTWHHSPPVTAIPRVSWTFLGPVLNVSALSGVHTLEFDCTRLEGVSKLTGVHYLSLFSVRFDVQELSKLGTVHTLSLPLVAIEDVSTLGGVHTLLFERNERIVDVSALGNCHKLELIGCPVSDMSMLGRVHTLNLESTNVSDVSMLSDVQHIELIPLQKSC* # ORIGINAL: g14130.t1 original gene structure, not modified by PASA NODE_6871_length_499_cov_94.9481 AUGUSTUS gene 2 499 . + . ID=g14130;Name=g14130.t1 NODE_6871_length_499_cov_94.9481 AUGUSTUS mRNA 2 499 . + . ID=g14130.t1;Parent=g14130;Name=g14130.t1 NODE_6871_length_499_cov_94.9481 AUGUSTUS exon 2 499 . + . ID=g14130.t1.exon1;Parent=g14130.t1 NODE_6871_length_499_cov_94.9481 AUGUSTUS CDS 2 499 . + 0 ID=cds.g14130.t1;Parent=g14130.t1 #PROT g14130.t1 g14130 ILDWYYNCLVKYFPVTHWEALFMDTDSLYIAIAGRSLEELCRPELKEEFAADYANWFVTTDTTPIEFPSLDGPIKLPAKAYHKRTPGLFKVEFDAGVGGRAIALCPKMYVVEGEKEAKYSAKGIQKTTNFGSLGKSELFKQYYAVLMGESHSVENRGLRFHGSTMH # PASA_UPDATE: g13800.t1, single gene model update, valid-1, status:[pasa:asmbl_2584,status:12],[pasa:asmbl_2586,status:12], valid-1 NODE_1772_length_9310_cov_23.5617 . gene 1 1444 . + . ID=g13800;Name=g13800.t1 NODE_1772_length_9310_cov_23.5617 . mRNA 1 1444 . + . ID=g13800.t1;Parent=g13800;Name=g13800.t1 NODE_1772_length_9310_cov_23.5617 . exon 1 101 . + . ID=g13800.t1.exon1;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . CDS 1 101 . + 0 ID=cds.g13800.t1;Parent=g13800.t1;5_prime_partial=true NODE_1772_length_9310_cov_23.5617 . exon 339 375 . + . ID=g13800.t1.exon2;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . CDS 339 375 . + 1 ID=cds.g13800.t1;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . exon 644 743 . + . ID=g13800.t1.exon3;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . CDS 644 743 . + 0 ID=cds.g13800.t1;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . exon 1000 1444 . + . ID=g13800.t1.exon4;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . CDS 1000 1334 . + 2 ID=cds.g13800.t1;Parent=g13800.t1 NODE_1772_length_9310_cov_23.5617 . three_prime_UTR 1335 1444 . + . ID=g13800.t1.utr3p1;Parent=g13800.t1 #PROT g13800.t1 g13800 VIVKVADFGLSRDTGASGDYYVAKNRRKLPVKWMSPESLERRIFTHASDVWSYGITMWEVYSRGAKPYAGLENHEVLGFINATKRLEKPEGCPQAIYAIMESCWRKHAETRPSFADIVTQLRKVIASYTRTTSVLESDVDVTQSGGKKASAKDTESTDNLLLSEQQGTYAETAPESHYVEQEEGPQESAA* # ORIGINAL: g13801.t1 original gene structure, not modified by PASA NODE_1772_length_9310_cov_23.5617 AUGUSTUS gene 3697 9310 . + . ID=g13801;Name=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS mRNA 3697 9310 . + . ID=g13801.t1;Parent=g13801;Name=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 3697 3876 . + . ID=g13801.t1.exon1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 3697 3876 . + 0 ID=cds.g13801.t1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 4247 4504 . + . ID=g13801.t1.exon2;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 4247 4504 . + 0 ID=cds.g13801.t1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 4877 5066 . + . ID=g13801.t1.exon3;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 4877 5066 . + 0 ID=cds.g13801.t1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 5635 7421 . + . ID=g13801.t1.exon4;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 5635 7421 . + 2 ID=cds.g13801.t1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 7811 8824 . + . ID=g13801.t1.exon5;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 7811 8824 . + 0 ID=cds.g13801.t1;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS exon 8990 9310 . + . ID=g13801.t1.exon6;Parent=g13801.t1 NODE_1772_length_9310_cov_23.5617 AUGUSTUS CDS 8990 9310 . + 0 ID=cds.g13801.t1;Parent=g13801.t1 #PROT g13801.t1 g13801 MTPWWHTQPACSCGTHRQLKTAKRSLPTSTPITLTTAASFASFANVALIMCIVGSTFFFSIADAQRGTLTVTLGQASISQSDCNDAIFGYTLCDPYFGISFSIDGAQEVSCEASSSDYIKKPANPFDASRFSCSGTIPLLLDSSKSMITITVSATDYDSSSFLNSDDPIGSGSATALAVPTATALRLNFGSSSWVELKISFACATGTSGSAPMAGLATRSPGAAAHQGSTDRHALRARRRHMARHAPSAPLARRVSTATLAPRAQHNALPTNMALVVRQPAAVRMVDIVILSRDAYAPFPDGLDRNVRVLAVRVDLALSVGYRAPATGAECVIEWSDAGAAPDGWARIAKLRAHRGRMAPVASCRVYRHCAGRTARDAMHSKDVCARQDGWAHTAMSRVPWGRMGRAACTSACARTVQHVMLPSVASVRVGGLDGIARCPAQRTDSVRAARRPATAPMAAHAIALSAAPAAMQVGLVCVAARRVLQGRLVAIARVCARAAATAVFAIGSRASARARTGGWESIAASHVPLAGRDPIAISAVCRDGTGSTARHPACARTARRAMHRVVACAAQDGRVPLAQTNANLAPGGCAVPKSAAIATAILHAILFWGASVMRATRESRATLYATSNPALGVLVRLLANAHAPQVGLVWVVTRPAPQDPMGLHARPPVCVKMVHNATGSLVHVTVLPDGQDQRATHHVKVGTTDQAANSTCHAKTVDTKTARSDAPAPSVGVASTAHLRALREHTVTCADSRAGVATTGHAARSLERAIVHPFRDGQALCAIAAVHSQTRSVQIAQRRATAPMNGATSCDRFTGVCACTAGSYGDKCQIACPSGKFGPGCIQSCSCNNGATTCDRFTGACNCTAGWMGYSCSQPCNGTMYGPGCTMTCGCTNGATICNATTGQCACLAGWTGRACDSGCPSGKYGPGCTIACGCLNGASTCDRFTGICDCTGVTGWNGTKCESACPATAFGPACGRACNCSNGATTCNRFNGVCNCTEGWKGNACTDRCAPTEWGAGCTTPCGCRNNATDCDRFTGNCNCTQGWTGKVCNVSCSTLAPQRYGPNCDRACECMNKGRCDPVTGACNCTTLYTGTNCGSYAPPPPAIGKVAKASLKALYLELAEGEWEYEIERIGCPSVPIVRWAGGSFNDTRNVIPNQKYTYILTAVNPVDASNKTRALPVQLPAVNATREDRPDRPTAAEALAIPIDKTRRIVRLSWLDDDSSGPINRTYITRSDGKTNTTTAFRQFT # ORIGINAL: g4108.t1 original gene structure, not modified by PASA NODE_966_length_15326_cov_51.452 AUGUSTUS gene 751 975 . - . ID=g4108;Name=g4108.t1 NODE_966_length_15326_cov_51.452 AUGUSTUS mRNA 751 975 . - . ID=g4108.t1;Parent=g4108;Name=g4108.t1 NODE_966_length_15326_cov_51.452 AUGUSTUS exon 751 975 . - . ID=g4108.t1.exon1;Parent=g4108.t1 NODE_966_length_15326_cov_51.452 AUGUSTUS CDS 751 975 . - 0 ID=cds.g4108.t1;Parent=g4108.t1 #PROT g4108.t1 g4108 MANVYAAERRAIVNGVKGVVRSVASKPEKAQQLSVIGERGCAITVGCRALKWYPCVSCAVIPMCFGTYSKLVVI* # PASA_UPDATE: g4111.t1, single gene model update, valid-1, status:[pasa:asmbl_10152,status:3], valid-1 NODE_966_length_15326_cov_51.452 . gene 11558 14039 . - . ID=g4111;Name=g4111.t1 NODE_966_length_15326_cov_51.452 . mRNA 11558 14039 . - . ID=g4111.t1;Parent=g4111;Name=g4111.t1 NODE_966_length_15326_cov_51.452 . five_prime_UTR 13920 14039 . - . ID=g4111.t1.utr5p1;Parent=g4111.t1 NODE_966_length_15326_cov_51.452 . exon 13065 14039 . - . ID=g4111.t1.exon1;Parent=g4111.t1 NODE_966_length_15326_cov_51.452 . CDS 13065 13919 . - 0 ID=cds.g4111.t1;Parent=g4111.t1 NODE_966_length_15326_cov_51.452 . exon 11558 12818 . - . ID=g4111.t1.exon2;Parent=g4111.t1 NODE_966_length_15326_cov_51.452 . CDS 11604 12818 . - 0 ID=cds.g4111.t1;Parent=g4111.t1 NODE_966_length_15326_cov_51.452 . three_prime_UTR 11558 11603 . - . ID=g4111.t1.utr3p1;Parent=g4111.t1 #PROT g4111.t1 g4111 MAPSGRLAGAQRKPSPAGANDGLPPPSSSLYGDLRILRRAHKSIFNRLCSIDYDAQFVCEIRSQFFPPTFPLVANLRCGRWYAPAFDATAYYKSTDGHPGEWDFSVQRLNLHVAMLAASCGGCLIVDSTRKGRTLPDSFSKTIPIWCAVLNRAVHRHRAATNASLDAADCGTPLGSSRVANSGCWSSAIDSQSAVCTVREIDNGCDRDDDAPLSDDGNRGDPWSARYLPWDESLHTPAFVSASEHEQITALLDSFVDKLLRCGADIAALSAVLCRPLRPLWVTTKSRFSTSHSDIKYADLGFIPIVCVSTSEPVLAGTAAPMKSILIGLSPLHPSVTPGTPVDPRLHSTTGDDLSINDVNLLASANANGAVNDAGGGSMVVPFAYVQGAGDDEELWSHGLTASLFWLHRHVLLSAGAANCEGLVRRIVASGACVAVDRGVSIQESDRAHFVGLQPARDGSQGGAQWATPASFAWIGDTGVAIGLSSAASELVSLAAVEAGPSPLGLVVDCDGPSDHIASTLTCDNMCRSSTLVVADSDGATLSTPVTRVHLGVGEGKKHRGALCAALLPASQAVRDVLASGKRVLVCCATGTDTSVAVVLAALLYCRDVRCSWLGGGNDNPTRSPQAGAVCVDSVENPCHGVRKSSSDAGWKVIVSRALTQIAATWPVARPSRGALKIVRQFLMDNASL* # PASA_UPDATE: g4110.t1, single gene model update, valid-1, status:[pasa:asmbl_10154,status:3], valid-1 NODE_966_length_15326_cov_51.452 . gene 6744 11121 . + . ID=g4110;Name=g4110.t1 NODE_966_length_15326_cov_51.452 . mRNA 6744 11121 . + . ID=g4110.t1;Parent=g4110;Name=g4110.t1 NODE_966_length_15326_cov_51.452 . five_prime_UTR 6744 6854 . + . ID=g4110.t1.utr5p1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 6744 7336 . + . ID=g4110.t1.exon1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 6855 7336 . + 0 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 7708 7769 . + . ID=g4110.t1.exon2;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 7708 7769 . + 1 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 8259 8429 . + . ID=g4110.t1.exon3;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 8259 8429 . + 2 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 8695 8866 . + . ID=g4110.t1.exon4;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 8695 8866 . + 2 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 9067 9241 . + . ID=g4110.t1.exon5;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 9067 9241 . + 1 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 9524 9602 . + . ID=g4110.t1.exon6;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 9524 9602 . + 0 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 9866 9942 . + . ID=g4110.t1.exon7;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 9866 9942 . + 2 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 10310 10432 . + . ID=g4110.t1.exon8;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 10310 10432 . + 0 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . exon 10615 11121 . + . ID=g4110.t1.exon9;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . CDS 10615 10764 . + 0 ID=cds.g4110.t1;Parent=g4110.t1 NODE_966_length_15326_cov_51.452 . three_prime_UTR 10765 11121 . + . ID=g4110.t1.utr3p1;Parent=g4110.t1 #PROT g4110.t1 g4110 MGFNALVEDPCPTRASTSSTNSVAAQAAANAVSQLSQQNSVDDNNYNSRNETPHTAGHRHLTAVNTTRALRCKECNACHCQCDQASLDSRLSASSADHLTPAVGSTSPRIIEGDELDRSQSSCAPCFNFLFGRLCRAALSPGVNKLRAGAKRIGGKATHVTFGMGSSNTVWLLGCRYELPEDEGSIAEDFRSHFWFTYRGNFRSIGASMYQTDAGWGCMLRCGQMILAQTLVMGTLSRAWRISERQPSPEYLRIASLFMDTPESAFSIHRVAEKGAKFDKSIGQWFGPTTMAQVIRALVTESGPGRPFSVHIAMDGVLCKDRAAVDQGNGPLLVLVPLRLGLDKINPVYANRLKSIFCLPQTVGMIGGKPNAAYYFVGAQGDHLLYYDPHQVSPAITPDNFKDNLESLHCDVINRMRVDDIDPSLCVGFYCKDRADFIDLCNAITDPAASTKEPLLFSVMDRAPKYDDSKGLNDFAASSDEELGGGPEEDDEYDFC* # PASA_UPDATE: g4109.t1, single gene model update, valid-1, status:[pasa:asmbl_10153,status:12], valid-1 NODE_966_length_15326_cov_51.452 . gene 1807 6301 . + . ID=g4109;Name=g4109.t1 NODE_966_length_15326_cov_51.452 . mRNA 1807 6301 . + . ID=g4109.t1;Parent=g4109;Name=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 1807 1846 . + . ID=g4109.t1.exon1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 1807 1846 . + 0 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 2147 2222 . + . ID=g4109.t1.exon2;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 2147 2222 . + 2 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 2371 2462 . + . ID=g4109.t1.exon3;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 2371 2462 . + 1 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 2795 2906 . + . ID=g4109.t1.exon4;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 2795 2906 . + 2 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 3040 3162 . + . ID=g4109.t1.exon5;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 3040 3162 . + 1 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 3661 3700 . + . ID=g4109.t1.exon6;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 3661 3700 . + 1 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 3911 4078 . + . ID=g4109.t1.exon7;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 3911 4078 . + 0 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 4413 4519 . + . ID=g4109.t1.exon8;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 4413 4519 . + 0 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 4955 5098 . + . ID=g4109.t1.exon9;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 4955 5098 . + 1 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 5301 5451 . + . ID=g4109.t1.exon10;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 5301 5451 . + 1 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 5642 5734 . + . ID=g4109.t1.exon11;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 5642 5734 . + 0 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 5998 6067 . + . ID=g4109.t1.exon12;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 5998 6067 . + 0 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . exon 6247 6301 . + . ID=g4109.t1.exon13;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . CDS 6247 6281 . + 2 ID=cds.g4109.t1;Parent=g4109.t1 NODE_966_length_15326_cov_51.452 . three_prime_UTR 6282 6301 . + . ID=g4109.t1.utr3p1;Parent=g4109.t1 #PROT g4109.t1 g4109 MRLKRFLLRYYPPGILLEFEQHSGAVKTKSIDLLDLSPTTPLEPLVEAICEQEPLIPPTRKEQVFNLLQKLQYKLSRTDDRQFYLFKVLTAHILPLTNVAFNKSGSKFITGSYDRTCKVWDTASGEELYTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWSADTGKCYHTFKGHTAEIVCLGFNAQSTVIATGSMDSTAKLWDIETGTEICSLLGHSAEIITLQFNNTGDLLLTGSFDHTVSIWDVRSGKRVHALIGHRGEISSAQFNWEGSSVITGSMDKTCKLWDVGQGQCVTTLRGHTDEVLDVSFNLTGSRIVTGSADGTARVYNTMTHACVSTMIGHESEISKVVYNPQGSRVLTASSDKTARLWDPDSGECLQIFEGHTDDIFSCAFNYEGDTIITGSKDNTCRIWR* # PASA_UPDATE: g5802.t1, single gene model update, valid-1, status:[pasa:asmbl_7845,status:12], valid-1 NODE_5084_length_1034_cov_75.2054 . gene 25 911 . - . ID=g5802;Name=g5802.t1 NODE_5084_length_1034_cov_75.2054 . mRNA 25 911 . - . ID=g5802.t1;Parent=g5802;Name=g5802.t1 NODE_5084_length_1034_cov_75.2054 . five_prime_UTR 858 911 . - . ID=g5802.t1.utr5p1;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . exon 776 911 . - . ID=g5802.t1.exon1;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . CDS 776 857 . - 0 ID=cds.g5802.t1;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . exon 581 640 . - . ID=g5802.t1.exon2;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . CDS 581 640 . - 2 ID=cds.g5802.t1;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . exon 258 406 . - . ID=g5802.t1.exon3;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . CDS 258 406 . - 2 ID=cds.g5802.t1;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . exon 25 115 . - . ID=g5802.t1.exon4;Parent=g5802.t1 NODE_5084_length_1034_cov_75.2054 . CDS 25 115 . - 0 ID=cds.g5802.t1;Parent=g5802.t1;3_prime_partial=true #PROT g5802.t1 g5802 MVGTIQPTAGFNAEKDAEVLRKAMKGLGTDEAAITVVLANRTAVERQAIKVMFKQMFGKDLITDLKSELSGNFEEVCLALLKTPPEFDAYTLRKAMKGAGTDEQTLIEVLLTRGNREIEAIKAAYAH # PASA_UPDATE: g9652.t1, single gene model update, valid-1, status:[pasa:asmbl_1280,status:3], valid-1 # ORIGINAL: g9652.t2 original gene structure, not modified by PASA NODE_1349_length_11858_cov_42.9241 . gene 7506 11641 . + . ID=g9652;Name=g9652.t1 NODE_1349_length_11858_cov_42.9241 . mRNA 7506 11641 . + . ID=g9652.t1;Parent=g9652;Name=g9652.t1 NODE_1349_length_11858_cov_42.9241 . five_prime_UTR 7506 7684 . + . ID=g9652.t1.utr5p1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 7506 7746 . + . ID=g9652.t1.exon1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 7685 7746 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 8140 8195 . + . ID=g9652.t1.exon2;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 8140 8195 . + 1 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 8329 8420 . + . ID=g9652.t1.exon3;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 8329 8420 . + 2 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 8708 8817 . + . ID=g9652.t1.exon4;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 8708 8817 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 9002 9281 . + . ID=g9652.t1.exon5;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 9002 9281 . + 1 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 9541 9787 . + . ID=g9652.t1.exon6;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 9541 9787 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 10007 10176 . + . ID=g9652.t1.exon7;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 10007 10176 . + 2 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 10555 10683 . + . ID=g9652.t1.exon8;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 10555 10683 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 10868 10957 . + . ID=g9652.t1.exon9;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 10868 10957 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 11319 11641 . + . ID=g9652.t1.exon10;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . CDS 11319 11405 . + 0 ID=cds.g9652.t1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . three_prime_UTR 11406 11641 . + . ID=g9652.t1.utr3p1;Parent=g9652.t1 NODE_1349_length_11858_cov_42.9241 . mRNA 7685 11405 . + . ID=g9652.t2;Parent=g9652;Name=g9652.t1 NODE_1349_length_11858_cov_42.9241 . exon 7685 7746 . + . ID=g9652.t2.exon1;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 7685 7746 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 8140 8195 . + . ID=g9652.t2.exon2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 8140 8195 . + 1 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 8329 8420 . + . ID=g9652.t2.exon3;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 8329 8420 . + 2 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 8708 8817 . + . ID=g9652.t2.exon4;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 8708 8817 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 9002 9281 . + . ID=g9652.t2.exon5;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 9002 9281 . + 1 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 9541 9793 . + . ID=g9652.t2.exon6;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 9541 9793 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 10007 10176 . + . ID=g9652.t2.exon7;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 10007 10176 . + 2 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 10555 10683 . + . ID=g9652.t2.exon8;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 10555 10683 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 10868 10957 . + . ID=g9652.t2.exon9;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 10868 10957 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . exon 11319 11405 . + . ID=g9652.t2.exon10;Parent=g9652.t2 NODE_1349_length_11858_cov_42.9241 . CDS 11319 11405 . + 0 ID=cds.g9652.t2;Parent=g9652.t2 #PROT g9652.t1 g9652 MSGRNKRRVRRGDDEEDEAKSVESYGRSLSREISEDGGSVASRSNNPTAENSGDESEGDTATQDIEFKAKEHIDNLSERSGAARESALNALKDTLSKNILSEFLVDRKETMMDALRRCFRKGGDKEKELATDVISLAIIQLGAEVEADFQDIRENLLQTLFDRTGATEGVRAAAARALGMGAFITDDVVPAIELMEKLAEVYGRKPATGPLPAAAIGSWALLLTRVPTSRLREIFRRQFKPLVSLLDSDSLDVRVNAGEALALLFEAARGEGHLEEDIEDAEGEEGDDEDEKESISNGNDLAVLCDRLQALATESSKRIGKKERAQQRSSFRDILYAVEKGQAPEETLKFQREKIVLDTWALIIQSSAIRDVLGEGMKTHFEGNELIRDIFGMGGVLSEDAAPGRKMSALEKRKYMSSNSDQSKARSRSRQKSRDKRMVV* #PROT g9652.t2 g9652 MSGRNKRRVRRGDDEEDEAKSVESYGRSLSREISEDGGSVASRSNNPTAENSGDESEGDTATQDIEFKAKEHIDNLSERSGAARESALNALKDTLSKNILSEFLVDRKETMMDALRRCFRKGGDKEKELATDVISLAIIQLGAEVEADFQDIRENLLQTLFDRTGATEGVRAAAARALGMGAFITDDVVPAIELMEKLAEVYGRKPATGPLPAAAIGSWALLLTRVPTSRLREIFRRQFKPLVSLLDSDSLDVRVNAGEALALLFEAARGEGHLEEDIEDAEGAGEEGDDEDEKESISNGNDLAVLCDRLQALATESSKRIGKKERAQQRSSFRDILYAVEKGQAPEETLKFQREKIVLDTWALIIQSSAIRDVLGEGMKTHFEGNELIRDIFGMGGVLSEDAAPGRKMSALEKRKYMSSNSDQSKARSRSRQKSRDKRMVV* # ORIGINAL: g9651.t1 original gene structure, not modified by PASA NODE_1349_length_11858_cov_42.9241 AUGUSTUS gene 373 6551 . + . ID=g9651;Name=g9651.t1 NODE_1349_length_11858_cov_42.9241 AUGUSTUS mRNA 373 6551 . + . ID=g9651.t1;Parent=g9651;Name=g9651.t1 NODE_1349_length_11858_cov_42.9241 AUGUSTUS exon 373 4471 . + . ID=g9651.t1.exon1;Parent=g9651.t1 NODE_1349_length_11858_cov_42.9241 AUGUSTUS CDS 373 4471 . + 0 ID=cds.g9651.t1;Parent=g9651.t1 NODE_1349_length_11858_cov_42.9241 AUGUSTUS exon 4618 6551 . + . ID=g9651.t1.exon2;Parent=g9651.t1 NODE_1349_length_11858_cov_42.9241 AUGUSTUS CDS 4618 6551 . + 2 ID=cds.g9651.t1;Parent=g9651.t1 #PROT g9651.t1 g9651 MTVKQFVDTLTGTFRNTRGRPRQTILPAAGAQQVNEEDEKGAASPAPAPPLVKQVTALKLNAAGNDGRGAVRGDPLQPADLSTPASGARHAAIPKSHLLAVVRYSLEVVTRVSLYRHLTFGTQYQLVLQVLLPVVTAMLTMIDASNMSHSISVMFLGALVLYANFLIGDDLNIDDYTKRLHARKSCVHAIGRYPFPFKQVVQVVVGVYSLILILYTGSSLLTGQALDVFAGTSTPMSQEVTDAFLTNMVILVAMAFLHLLCSMFHWTATMGAFVSCRPMWSIPTQLEETSARRERNLVRERGKGHDRINACDKFEAATQFIWVCLVWYYRFLVSFFFIVPDSKDLREWIDQTNCSRDMLEELIKTTADSAMNIRAIPGAVVSLEQVLPYKHSAAYWKYRVRSFMHGELLCALSDGSVEVSGRAHSELRKFGGVKSMFGLLSHAVALTAWSTSDSVRFLAGDGLVDESQMKIGANLTAIDFNPFRSVWLKQKPEAEDDQPKSGAVAKENHADTATKGGPQSAGDATSPSDSAKAASSGGAGVVSGNDISQSEEIDGVAGEKRPPVQRGNDIPLRPMPARVPHSAKVLAAPPSLASTEYVTVTVPAGSDDPLLMESQPKEGKPKQSDEAAAPLERKQSRRKVAARDAMEPTQTVSSEDKTRSGDKAGEKDQSGENPANASDAVEPTVSAGSEGKAAMLSKSIADRALRQTRKHSKFYVAPDENAIPDMSTFDVISCVSLSADGRMLATATVPGDNGKCVIFIWATSGALIRRWCPESTMTDKLECTSLAFSPLPNNELAAAFSNGSVLVWDLKKGQRLLQEKGYVNNISHLAYATRVVGSAPNSGNFVVYASTTDHKWYITIRESTTDSQKGGEIVVIEYLLSRPEESSKAEPDARVVVACGMTLMSMAVGTNTTQTNHMIAAISASGDYVVYESDLKRDFAKAKTKPEEDFKADMTLKKLDIGRAEMIIFAEFSPDLRDLVFLTRHNSKVRFTAYGYRLDGMRYESKWSVTLDSAPTSVAIGARQKVGKRVKAKYALIRMADTVLVLSVKSGRELRRLGMSDSPSSSRETKDTTGDDDANGKEAQTKEKTDTLPAEENKQTETKIASGIDAKGGAAPANVQTDAYASTQPTDAEANPDVRLPWVAASSRMTEEITVAALFGRVVRVWGCDVKQEAVPAASELFFSCDDNSATLARLRKEKLAAMISESRQLWDITLLTVAARIACKPIASSVSSVSPDKKYVAIGCNGKEAFVCDMRNGNIVRAVTFDEDGAVSAVGYQDSGAQLVVAFSSARDTKATLTPPIVLKEGVLMAGNATVGVWSISEGKRVHFHKARKNDAGDSCKVGVWTIKNGYEVKLQLPGDVTCLANRSDVGHSDDRRSNGRRRDDSDSDGDDGDDSRSNGRCRDDSDSDGDDGDDSRSDDSDRDHDEDSESLDSEESHSTFGYYREEEEDDLSAYGFHQNYYSDEDADDWDREYDDNNEDGSKSAEDTPNQVAAQTAETNAEGRKFAIVAPGGKYAVLGVGASATLCNLSGNLRPKICDLTHSAPTDNSQPFLASFSPKGESIAWLATPNDVRTLTIAAEKGALLAHGNTSGPVVSMQWSPDSSKLLTVTLDGGTHFWDVEKSSCLSPANPSPPLCDTPLLFHQQTGSSSDAQNNTWAVSGKWPTLWEVDWGANTVKVRWEVAEGISGRDATQQNDIDNTLSMRRNKSSQKSADAAVREAFLPRVRGIPDLYRIWQELMSVLSLLLTRLKAPSEDVLDAMIKMEATLKKSLETFHENAWKWLVHYDRQSGRKRPTHLQFTEGIVLSAHVPLPEGVTLGGRVGAHRRAEADKAWESVRTKDDGSDSAQLSFCIRIPLKQPSSIDVVERIGKALAVQSRQDKEKEKPVVDDKAIGAPTQPSLPAPTTVVNGGGGKLNPIPGDHAGAAEALVSAEDPEVELLVKQMSQVYDQIVLDTYRARHHAHVIWTRIVNRCVRPNLLAFVPLRFQDDVADGYDEYDASKAAAGQMNED* # ORIGINAL: g11632.t1 original gene structure, not modified by PASA NODE_4095_length_2190_cov_36.9513 AUGUSTUS gene 693 2019 . + . ID=g11632;Name=g11632.t1 NODE_4095_length_2190_cov_36.9513 AUGUSTUS mRNA 693 2019 . + . ID=g11632.t1;Parent=g11632;Name=g11632.t1 NODE_4095_length_2190_cov_36.9513 AUGUSTUS exon 693 1263 . + . ID=g11632.t1.exon1;Parent=g11632.t1 NODE_4095_length_2190_cov_36.9513 AUGUSTUS CDS 693 1263 . + 0 ID=cds.g11632.t1;Parent=g11632.t1 NODE_4095_length_2190_cov_36.9513 AUGUSTUS exon 1433 2019 . + . ID=g11632.t1.exon2;Parent=g11632.t1 NODE_4095_length_2190_cov_36.9513 AUGUSTUS CDS 1433 2019 . + 2 ID=cds.g11632.t1;Parent=g11632.t1 #PROT g11632.t1 g11632 MASSSPTAPAIANATTADARDDGSGDSITEGLVDKIQNLLSKVGLGGISAENFDLSADDQPPVTADKKALRTLDLEGVAEYIRSGKCKNIVMMLGAGASTSAGIPDFRTPGTGLYYNLQKFGLPDPQAIFDIEFFGENPRPFFTLARELYPGMFKPTPTHYFIRLLAEKGLLKRAFTQNIDTLERLAGIPGELIVEAHGSFASATCTECKKPHSCDHVKEAVFSGGIPKCDACAGVVKPDIVFFGEGLPKRFFDLSRVDFPEADLLIIAGTSLVVHPFASLVHFVEDRTPRLLINREKCGQVSGIEALLSGRQGLAFDSPGNYRDVCHLGACDDGFVKLAKLLGWDEELNELVDREHARLEKEFAALKASGSNPVEEKTSSETKN* # PASA_UPDATE: g6191.t1, single gene model update, valid-1, status:[pasa:asmbl_10249,status:12],[pasa:asmbl_10252,status:12],[pasa:asmbl_10253,status:12],[pasa:asmbl_10254,status:12], valid-1 NODE_994_length_14963_cov_41.6147 . gene 2606 8223 . - . ID=g6191;Name=g6191.t1 NODE_994_length_14963_cov_41.6147 . mRNA 2606 8223 . - . ID=g6191.t1;Parent=g6191;Name=g6191.t1 NODE_994_length_14963_cov_41.6147 . exon 8107 8223 . - . ID=g6191.t1.exon1;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . CDS 8107 8223 . - 0 ID=cds.g6191.t1;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . exon 7735 7964 . - . ID=g6191.t1.exon2;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . CDS 7735 7964 . - 0 ID=cds.g6191.t1;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . exon 5469 7606 . - . ID=g6191.t1.exon3;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . CDS 5469 7606 . - 1 ID=cds.g6191.t1;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . exon 2606 5266 . - . ID=g6191.t1.exon4;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . CDS 2814 5266 . - 2 ID=cds.g6191.t1;Parent=g6191.t1 NODE_994_length_14963_cov_41.6147 . three_prime_UTR 2606 2813 . - . ID=g6191.t1.utr3p1;Parent=g6191.t1 #PROT g6191.t1 g6191 MDGLKGFLNKVQQPSAEKVREENQHKNAMLEQASTHIKQLQQNYCYSDGHMAIVGKRDSSLLLLCDVLDTIFRHGLKRKKDYWDFVSQFVQKDDLAMLSSLVYVKTDAGKCRAWLRHALNEGMVESYLDSFANDTHSRSSYYEPYAFIMDRERFLILQTLISGAARLKFRIPFDDADLDSAHTLQLPPSTTPASLPSSIPSSPQTPRVELHASHAGDDAAHISAEGSQLSATQQQQPTAAPAPAAAAPPPAGEESGLGLFATRFARAFSQATENIKVKIDAKMNEGKVATVDSSPSLSKGAIVEVSVSAEAGESPKSTPNTTTANPSVTATSTTTASAPAASGTPSATLVPPPVSSSLSLSGPAVDDGTPVALLSAELAAAAQPIGMPPANDSDLVFAHTARRKKKTSVSGDGAKSSKKARGKSFSKGADTVTKSAPGVDPGAGIAGNSDVSAAPISEAAEEVDAISLSSSVTASEVQPDDVARSFPGTSLSLAGAVEESTLTNVVESNNDSAMIAIAAQQIQTPTEASPPTTASTTTTPPPSVPEIQASPPTTTASVAATTLPTPVIVSAAAFTAPQGTAESGDTTPRSVGARLAATFGISTESAPGVTTLRIPESSRESWTDGDSAISAEVVLQATGERGLAVPGKKVDAKRSGAMEKSPSGKRKKKPAGIAAPSSTASFPPVSDTSDWPSVPPVAPEPVVAEDDFLTLAPRTDATVSEAFASGLGAESRAPDVLASSGSDVVGSIVGSSVGRRTSTEVEEEEDAVYSKLLMRSKATMLTSLQDIRFSSTTASTRSSGDSYSGPSEPAPPPPPRDPSLPVPIEELQVASPGATVGVVPIDTQMHMILAVHVLPGDKETILRLVKVRRPSSIPYRERTSYLLISSEAIYVLAPVSDPAVRFRVESRRPVTTAFGFYIGVDSQTLTIIYKDGTKDLLLTKDEACASACRSGIFLAAEKFNHVIQMDIAQSSEIDAAFLEANEPGFGKTAKRPGGILALYAIVHWHTETIPDDNSSSQIQSNSNNNSQQQQQQHQQQQHASAEDGASLPRHRQTFVEQPAEQETGTGIFRFRSWSLSSHSQQQGKATGNKNSDSGHPRLPSVTESSSANDGLELSLRDSRSTLGSVVSLGSESTTVSEAPSAGATANASGNTSGNTSGLASGSASGLTSGSAGAAGLLSSVAGWRPISTLTSLVSHSDLGDFEDDAEWVSLEMEVARRKDSGERARAASGGNDVRRPGRFGPHDVDLALCELKMFGLPLFEWIAMATVEEDKGHVQRQSPEPVLSSRLDYKGHYYKITTWKQNHFKLCGGSILHYRTEHDSSPKTTFRVAGTGCLCRKVIDYDKPHVFDVIVAGKVYSLAAHEAAEQQRWMRAINLVAALPLQNGTRSVLASAPALMTRSDGSSAQVRVRLILLSDILLVVNDDKKYTNEILYVLPLRSAVTAERKNCPCELTLVAPAATLVLQMESVADRNEWVVRLSSAIRGVNATPSPHDPQRNWFDPLAALELLGRPLQIIEKPLAFIGGIVLRPIFAVASGEMSQPAPPPVGRGYMACSMLMSTRNVYITIEDHRAHTFTLISARTIESISVLWRPPDMPTYCMVEFSEALPEKVWHLAFASKEEMLRVSKTIADLYKSRMDRDLPIVVSG* # ORIGINAL: g6190.t1 original gene structure, not modified by PASA NODE_994_length_14963_cov_41.6147 AUGUSTUS gene 192 2296 . + . ID=g6190;Name=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS mRNA 192 2296 . + . ID=g6190.t1;Parent=g6190;Name=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS exon 192 357 . + . ID=g6190.t1.exon1;Parent=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS CDS 192 357 . + 0 ID=cds.g6190.t1;Parent=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS exon 475 1131 . + . ID=g6190.t1.exon2;Parent=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS CDS 475 1131 . + 2 ID=cds.g6190.t1;Parent=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS exon 1371 2296 . + . ID=g6190.t1.exon3;Parent=g6190.t1 NODE_994_length_14963_cov_41.6147 AUGUSTUS CDS 1371 2296 . + 2 ID=cds.g6190.t1;Parent=g6190.t1 #PROT g6190.t1 g6190 MAHEGDSRKVSAADVFKTVGVLGGGQLGRMMAQAAHRIGARIVVLDPAEDSPAGQVAHKQVLGNFRDVSKIAELAAECDVVTVEIEHVNADALMELQNAPRNRQLDIQPSPKTIKLIQDKYLQKVHLAKHGVPIPPFFDAPNEAAIADIGATLGYPLMLKSRLLAYDGKGNAVVADKSDIGRALKSLVSQSVYVEGWVHFTKELAVMVARDTAGNVVSYPVVETIQRNNICDTVIVPAAISEAAANKARSFAEDAIKSFEGAGIYGVELFLLANGDVLLNEIAPRPHNSGHYTIEASVTCQFEQHLRAVLGLPLGDTSLRVNAATMINIIGEADGEEGMRIAWDVCGRALSVEGASLHWYGKHEVRRARKMGHITVTGSSPSEVASRVARIRGVCADASAATPAHAKAAPVVGIIMGSDSDLPTMRPAAQILTDFGVPFELTVVSAHRTPLRMVEYAKSAHTRGLKVIIAAAGGAAHLPGMVAALTPLPVIGVPVPLSYLDGQDSLYSIVQMPRGVPVATVAIGNSTNAGLLAVRMIGGCSDPSLLQKMCDYQSRMEIEVLGKVERLEREGWDKYDVAPAHK* # PASA_UPDATE: g6192.t1, single gene model update, valid-1, status:[pasa:asmbl_10251,status:12], valid-1 NODE_994_length_14963_cov_41.6147 . gene 8870 14222 . - . ID=g6192;Name=g6192.t1 NODE_994_length_14963_cov_41.6147 . mRNA 8870 14222 . - . ID=g6192.t1;Parent=g6192;Name=g6192.t1 NODE_994_length_14963_cov_41.6147 . five_prime_UTR 14164 14222 . - . ID=g6192.t1.utr5p1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 14076 14222 . - . ID=g6192.t1.exon1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 14076 14163 . - 0 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 13658 13813 . - . ID=g6192.t1.exon2;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 13658 13813 . - 2 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 11535 13237 . - . ID=g6192.t1.exon3;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 11535 13237 . - 2 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 11105 11318 . - . ID=g6192.t1.exon4;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 11105 11318 . - 0 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 10842 10962 . - . ID=g6192.t1.exon5;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 10842 10962 . - 2 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 10548 10617 . - . ID=g6192.t1.exon6;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 10548 10617 . - 1 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . exon 8870 10259 . - . ID=g6192.t1.exon7;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . CDS 8970 10259 . - 0 ID=cds.g6192.t1;Parent=g6192.t1 NODE_994_length_14963_cov_41.6147 . three_prime_UTR 8870 8969 . - . ID=g6192.t1.utr3p1;Parent=g6192.t1 #PROT g6192.t1 g6192 MADWGSVRARQWPASTILSVGCVLMLVFQAAVTQANFEMDVGRAPTVGMEDMHQAHSRGRRALSNIDPWWCSWFGGCDPFDGVALSLISTAANCTDAPGAYTFAPTCGSATRVTCQSSFRSYIPYSKVSHNISKTTTLKSCGLFTGSTAEPTTLALQAYIVVGTGGPATLSTCTGSSTRQGDTTLIGVMTGTCGALTCLAGVTSSACGAHRTVTFTTTANQEYVVYVTGAGGFTLTASGAIRLGTPVITPTVRRGQAVAFAVSASRDLASAGSFDAMLTEPGALGESSLSTLGFTATTMTSSSLHITVPVTAKVGTYTVRYGVGALSTRATFTVLPAQTVTFNERRKDNMDAHRTQRFRAACTATTPTGTPTNTACAAAIDLGASACNTFLIDTTAQKTATMTPGTNAYCAWLDSNMKAPAFVQWFKFVSPGGNISISTCSEDSAEIDTFVAAWIGTCPTSTTKKQCDLIRDDTAGCNGYNSKFEMKTVAGTTYYFVIGAHGGAKGQIRVTLTGDAAAFNRYTQSVYRRGQEITLDVNLATPLDPMETVVPSLDMAEPVAIPQPITSLSAPRVSPPVDWFAYYTKQVNATKVQLSVYPPANAYLGDYTLSVDVGGQRVATVPFTLIFNPMVQEDDVYYENAALREEYVFNENGLIWRGSAGVDAKGVAENSGYGWGFDQFNLIHLTVAINGLKDLIKTRLEERRAPFRIARQLSYYIGNEVLEGRWSGDYADGKDPSYWHASNLLLESYWTTKLPTKYAQCWVFSGVSTTIARALGIPVRSVTNFESAHEDARTTTPRYTAKLSMYYALSGDSYLSWDTYNDGSIWNFHVWNDMWFRRPDIGQNRPDWNAVDATPQEVSMQDMKYSEAQYQMGPAYLPTVKARNSTMYYDTDFVISEVDADYYEWLCSSKTKSTCKSTVDIKKVGQETATKLPGFMVEEDPQRSRQLVVNDYKNETINNKARARRSDLTMRNAVSMDAWVEYVSPVDPVVVVELHPEANADQAPHRLVVRVDVEVTSYTGDTLRNNIHAATETITPPREVDASPVTVRLPVDKHHSFVGRNRFLRLIVSATCPDTGDVLFFTTLTANPRMKLDVSIQYDWAVSARNAREAMSGHFLLSGTEARPRVRFTNPLPHAINDAVVQLTSGTGSVIGMGGLSYSAKVHMGRVEAGASVTALGPRFIAIEEGQHVIHASMEGAGLADIHGHTLVYVAHR* # ORIGINAL: g7231.t1 original gene structure, not modified by PASA NODE_1309_length_12258_cov_43.1516 AUGUSTUS gene 232 2580 . + . ID=g7231;Name=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS mRNA 232 2580 . + . ID=g7231.t1;Parent=g7231;Name=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 232 296 . + . ID=g7231.t1.exon1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 232 296 . + 2 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 713 880 . + . ID=g7231.t1.exon2;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 713 880 . + 0 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 1075 1166 . + . ID=g7231.t1.exon3;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 1075 1166 . + 0 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 1574 1728 . + . ID=g7231.t1.exon4;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 1574 1728 . + 1 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 1897 2013 . + . ID=g7231.t1.exon5;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 1897 2013 . + 2 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 2182 2222 . + . ID=g7231.t1.exon6;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 2182 2222 . + 2 ID=cds.g7231.t1;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 2431 2580 . + . ID=g7231.t1.exon7;Parent=g7231.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 2431 2580 . + 0 ID=cds.g7231.t1;Parent=g7231.t1 #PROT g7231.t1 g7231 QSTFHIITGPNMGGKSTYIRQVGVICLMAQMGCFVPCASAEISVADCILARVGAGDSQLKGVSTFMAEMLETAAILKSATKNSLIIIDELGRGTSTYDGFGLAWAISEHIATKIGAFCLFATHFHELTALADAVKTVSNLHVTALTSNKTLTLLYRVMPGVCDQSFGIHVAELANFPKKVIDLAKRKAEELEDFQGEDEADPARKKQRIEQKEGESLISQFLSELAAIPESTSSEEIAKRADVLMASLEKSHNSYVQSVMR* # ORIGINAL: g7233.t1 original gene structure, not modified by PASA NODE_1309_length_12258_cov_43.1516 AUGUSTUS gene 8746 9442 . + . ID=g7233;Name=g7233.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS mRNA 8746 9442 . + . ID=g7233.t1;Parent=g7233;Name=g7233.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 8746 8989 . + . ID=g7233.t1.exon1;Parent=g7233.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 8746 8989 . + 0 ID=cds.g7233.t1;Parent=g7233.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 9261 9442 . + . ID=g7233.t1.exon2;Parent=g7233.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 9261 9442 . + 2 ID=cds.g7233.t1;Parent=g7233.t1 #PROT g7233.t1 g7233 MNTAQVSDCKTSRNGAFVAAYTAAQVSLRDVTLTTTGHLCRGEHEGVETINNASYLAPVNIVGDLLPGWQRGGMVAGVPVKMATTTPHFGVFESASLRRRLDDNEDAKRLPESLRINVTLKEGPEMQRLQTSGWARAVRGH* # PASA_UPDATE: g7232.t1, single gene model update, valid-1, status:[pasa:asmbl_1162,status:12], valid-1 NODE_1309_length_12258_cov_43.1516 . gene 3743 7110 . + . ID=g7232;Name=g7232.t1 NODE_1309_length_12258_cov_43.1516 . mRNA 3743 7110 . + . ID=g7232.t1;Parent=g7232;Name=g7232.t1 NODE_1309_length_12258_cov_43.1516 . exon 3743 7110 . + . ID=g7232.t1.exon1;Parent=g7232.t1 NODE_1309_length_12258_cov_43.1516 . CDS 3743 6634 . + 0 ID=cds.g7232.t1;Parent=g7232.t1 NODE_1309_length_12258_cov_43.1516 . three_prime_UTR 6635 7110 . + . ID=g7232.t1.utr3p1;Parent=g7232.t1 #PROT g7232.t1 g7232 MEPSSWAGGTPPCLECNGPVYMMERIVIENDAYHANCFKCCECGAKLTTATYRRDRQRHLYCAKHGNSSSPRASPGGSPATLRHRNVNVDANASSSPSTMSPATERRTSLSIVLNAGQGGRRPSFSPLGSPRTPRSPRSPRGSCTGDSETLVTWRRLYRTAKDIAGGLVQTRTTPSGERDDTFYADDMLAWLVESGNAATRGDALGLCERLQLMGGLRPIAENEPFRDSHDLCAFSAAMLDGSEGPLSTSQVHRALRASITSMDGGSVAPMATTGPLQSNEEAVRQMIRRTDGWIIEDAPVAGPFVPPASPVLKAPPSPTPASASAAAAAFAAAAPNALAASLLQPEESSVHPLEHLDPDAGEYRAHFFGKEHGNYYATAEMGGPAVISIRKDKIGADEVYRAILRTMTKDYRGQVSIASAVSADGRGRGKPTVEGIAKTVSAGACAVERWLPCFHADSSDCMFKYDENGIVRQYKFGIVYGKDGQTTEEQFFGNCEMSPAFDEFLNMMGERVSLLGFTKYRAGLDVKYEMTGDKSVYTTWCRREVMFHVSNLLPFTEGDPQQVQRKRHIGNDIVSIVFHEGTTPFIPTCIKSHFLHVYVVVQPDVLSGGSSTQPARYRVSVVHRDGVPSFGPAASAPTIVERGPALREYLLAKMMNGENASYKAPNFARLVQRTRNGLLRDMVDTFSRAANDEKSPAAAAMLKRTKALGLVLLDDDGTGADGEEKPKNRLLDSLRTLRKPKTLSRTNSDDAALAGNTSAPSSPTPVKRDSLRVVVGEESERRLSASAVDIGGASGSGGGFKMIRHDEPDVAARDRSKSDVAPLKPTVGRTASLVLPLKPEKEKLSLAEMLFEMDQFDDDGDAPEEGASGGAAAESEREKKDAEADKKKSKAQLLQENKALRAHLVASEVEKARLHNRVSLLGGDTVRIKDENQALKTEVQALKNEAQKLKVQLKLLQQRPSA* # ORIGINAL: g7234.t1 original gene structure, not modified by PASA NODE_1309_length_12258_cov_43.1516 AUGUSTUS gene 9859 10815 . - . ID=g7234;Name=g7234.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS mRNA 9859 10815 . - . ID=g7234.t1;Parent=g7234;Name=g7234.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS exon 9859 10815 . - . ID=g7234.t1.exon1;Parent=g7234.t1 NODE_1309_length_12258_cov_43.1516 AUGUSTUS CDS 9859 10815 . - 0 ID=cds.g7234.t1;Parent=g7234.t1 #PROT g7234.t1 g7234 MSDPSFRAPIHQSHIVIEVPKGKNIYLREASGGDIILDGPSATAVIGGAAGKPSLLTNIAGLLERTLAAERNYASLVDLLTTAFVRIQKLELDAAARRIVLTATGSNITEANDKVVYFDMAWSAVPALQATAVYLVQARGLPNRCGGNYVSYSTGIVTIGILYDSPDSTVLSHLVYAMSAHVSAGYDSNNLFTAQVVQAVSYAGLTSAQPIVLLDNGKNQTAGEILVQATFYNTGLRLPQEKNFFPISQTTTATWDKLRFKLSGFTFDSNSCRAQEVALSSVTHETGLGLAVRTEINVSKRTPTLALTAKLSAYKCET* # PASA_UPDATE: g3065.t1, single gene model update, valid-1, status:[pasa:asmbl_8359,status:12], valid-1 NODE_5915_length_682_cov_140.379_potentialcontaminant . gene 1 682 . - . ID=g3065;Name=g3065.t1 NODE_5915_length_682_cov_140.379_potentialcontaminant . mRNA 1 682 . - . ID=g3065.t1;Parent=g3065;Name=g3065.t1 NODE_5915_length_682_cov_140.379_potentialcontaminant . exon 1 682 . - . ID=g3065.t1.exon1;Parent=g3065.t1 NODE_5915_length_682_cov_140.379_potentialcontaminant . CDS 1 682 . - 0 ID=cds.g3065.t1;Parent=g3065.t1;5_prime_partial=true;3_prime_partial=true #PROT g3065.t1 g3065 AECPNQVLVDGEVTDEFDIRAGLKQGDVLSPLLFNIFINDVVQAMKEGGIEGVQLTYSDAKEVQWASILLFADDVVLMSYSVGEINRALGIFSNFLRKWRGTLNVGKLKGMSICPTVVRDGDATVEYRGEPLEIVSKFPYLGVALTPNLDWTEAMSEAATHGRRQTGAIHGILTNKNLSMRTRQVVLQTRVRSGMEYGLELFRPTTQALAKLDSVQRMALCLIAGCN # ORIGINAL: g13814.t1 original gene structure, not modified by PASA NODE_3605_length_3129_cov_39.5796 AUGUSTUS gene 214 1259 . - . ID=g13814;Name=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS mRNA 214 1259 . - . ID=g13814.t1;Parent=g13814;Name=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS exon 1168 1259 . - . ID=g13814.t1.exon1;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS CDS 1168 1259 . - 0 ID=cds.g13814.t1;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS exon 861 931 . - . ID=g13814.t1.exon2;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS CDS 861 931 . - 1 ID=cds.g13814.t1;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS exon 629 741 . - . ID=g13814.t1.exon3;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS CDS 629 741 . - 2 ID=cds.g13814.t1;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS exon 214 300 . - . ID=g13814.t1.exon4;Parent=g13814.t1 NODE_3605_length_3129_cov_39.5796 AUGUSTUS CDS 214 300 . - 0 ID=cds.g13814.t1;Parent=g13814.t1 #PROT g13814.t1 g13814 MPDDKQRYLRLGDVVSLFAEGSACGFLSTLGLIDDRCVVQPDAGTLESIPKKFRDCHFKLYPMHRYTAQKQYKKARSNLSTLPDVVFQKKLQIASSFEEKQNEEEDKRTFGQVVEYGQVLQ # ORIGINAL: g9358.t1 original gene structure, not modified by PASA NODE_1944_length_8405_cov_59.7955 AUGUSTUS gene 224 4592 . - . ID=g9358;Name=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS mRNA 224 4592 . - . ID=g9358.t1;Parent=g9358;Name=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 4554 4592 . - . ID=g9358.t1.exon1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 4554 4592 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 4218 4311 . - . ID=g9358.t1.exon2;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 4218 4311 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 3974 4057 . - . ID=g9358.t1.exon3;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 3974 4057 . - 2 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 3754 3836 . - . ID=g9358.t1.exon4;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 3754 3836 . - 2 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 3256 3534 . - . ID=g9358.t1.exon5;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 3256 3534 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 2530 2875 . - . ID=g9358.t1.exon6;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 2530 2875 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 2118 2228 . - . ID=g9358.t1.exon7;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 2118 2228 . - 2 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 1804 1907 . - . ID=g9358.t1.exon8;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 1804 1907 . - 2 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 1306 1436 . - . ID=g9358.t1.exon9;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 1306 1436 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 857 937 . - . ID=g9358.t1.exon10;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 857 937 . - 1 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 507 663 . - . ID=g9358.t1.exon11;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 507 663 . - 1 ID=cds.g9358.t1;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 224 349 . - . ID=g9358.t1.exon12;Parent=g9358.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 224 349 . - 0 ID=cds.g9358.t1;Parent=g9358.t1 #PROT g9358.t1 g9358 MDKGGFFGFNADLPPFDDSLESELAAVDDVGEFDVKNDETFGDDDVIAEGVGPWGTKAEDLISQEAAKFKGADALSQGMKGLDLKDAAAFQLDLRPTSQQERFDYNGGQFGAASVWGGAPPHRPPSHADSPWGNSKATPSSPSARTMGLPPPPTGSTVLSLDEIERKMREGGQQGGAAALQQQQQHAPPGFPPGVNFPPYGYPNYGPPPGHPGHPGHPGEYGGGMQQWSPYGGPMGNIPPNMGPYGMMPPPMHPMHQMPVQQPPPNFQPPPLHQPPLRRESRFMTRGDKDFIIRIQLSQLHTDNPAVEDFYYQAYMLKKYRQDESDNLRIMIPQHAAAQPRRQGPVFENALGKIPMSSIRNPRQMIEVPRDDKVHDPNAPASDDDVREIARRRRLMRSIEGAYQRLVDIEDLDKKMLGLPKADRQALFERREELVRDIAAAVRIPSDPSPKESDDAFFVEAMSVPKGLRLVRRVLALLPRDQSVVAIGALLRNAPAIAAARAEMTAILLSHAAPSAVRVVDTLPLALVNQLWSVGAAVRDLAKHK # ORIGINAL: g9359.t1 original gene structure, not modified by PASA NODE_1944_length_8405_cov_59.7955 AUGUSTUS gene 5240 7110 . + . ID=g9359;Name=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS mRNA 5240 7110 . + . ID=g9359.t1;Parent=g9359;Name=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 5240 5317 . + . ID=g9359.t1.exon1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 5240 5317 . + 0 ID=cds.g9359.t1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 5570 5658 . + . ID=g9359.t1.exon2;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 5570 5658 . + 0 ID=cds.g9359.t1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 5803 5878 . + . ID=g9359.t1.exon3;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 5803 5878 . + 1 ID=cds.g9359.t1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 6116 6307 . + . ID=g9359.t1.exon4;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 6116 6307 . + 0 ID=cds.g9359.t1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 6631 6765 . + . ID=g9359.t1.exon5;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 6631 6765 . + 0 ID=cds.g9359.t1;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS exon 7045 7110 . + . ID=g9359.t1.exon6;Parent=g9359.t1 NODE_1944_length_8405_cov_59.7955 AUGUSTUS CDS 7045 7110 . + 0 ID=cds.g9359.t1;Parent=g9359.t1 #PROT g9359.t1 g9359 MAEEGLGSEDERQCKRLWRIRRTLTQMAADRGYLVEEEEVNISFERALQDNNYTPNRSNMAFAKKDDPTDQLIVFFPDVKKVGITHLRTFCNQMEKEKIQRGIVVVSEGMTSSAKNFLSEMAASNYIIEQYQETELLVNITEHQLVPEHRLLSEEEKLTLLAKYKLRDTQLPRIQHTDPIARYYGLRRGQVVKIIRPSETAGRYVTYRLVV* # PASA_UPDATE: g13926.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_3084,status:3], valid-1 # PASA_UPDATE: g13926.t1, single gene model update, valid-1, status:[pasa:asmbl_3083,status:3], valid-1 NODE_1949_length_8389_cov_40.1113 . gene 2764 8144 . - . ID=g13926;Name=g13926.t1 NODE_1949_length_8389_cov_40.1113 . mRNA 2764 8144 . - . ID=g13926.t1.1.5b6be70a;Parent=g13926;Name=g13926.t1 NODE_1949_length_8389_cov_40.1113 . five_prime_UTR 8128 8144 . - . ID=g13926.t1.1.5b6be70a.utr5p1;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . five_prime_UTR 7687 7908 . - . ID=g13926.t1.1.5b6be70a.utr5p2;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . exon 8128 8144 . - . ID=g13926.t1.1.5b6be70a.exon1;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . exon 7189 7908 . - . ID=g13926.t1.1.5b6be70a.exon2;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . CDS 7189 7686 . - 0 ID=cds.g13926.t1.1.5b6be70a;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . exon 4461 6919 . - . ID=g13926.t1.1.5b6be70a.exon3;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . CDS 4461 6919 . - 0 ID=cds.g13926.t1.1.5b6be70a;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . exon 3601 4180 . - . ID=g13926.t1.1.5b6be70a.exon4;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . CDS 3601 4180 . - 1 ID=cds.g13926.t1.1.5b6be70a;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . exon 2764 3310 . - . ID=g13926.t1.1.5b6be70a.exon5;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . CDS 3101 3310 . - 0 ID=cds.g13926.t1.1.5b6be70a;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . three_prime_UTR 2764 3100 . - . ID=g13926.t1.1.5b6be70a.utr3p1;Parent=g13926.t1.1.5b6be70a NODE_1949_length_8389_cov_40.1113 . mRNA 2764 8144 . - . ID=g13926.t1;Parent=g13926;Name=g13926.t1 NODE_1949_length_8389_cov_40.1113 . five_prime_UTR 8128 8144 . - . ID=g13926.t1.utr5p1;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . five_prime_UTR 7687 7908 . - . ID=g13926.t1.utr5p2;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . exon 8128 8144 . - . ID=g13926.t1.exon1;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . exon 7189 7908 . - . ID=g13926.t1.exon2;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . CDS 7189 7686 . - 0 ID=cds.g13926.t1;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . exon 4461 6919 . - . ID=g13926.t1.exon3;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . CDS 4461 6919 . - 0 ID=cds.g13926.t1;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . exon 2764 4180 . - . ID=g13926.t1.exon4;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . CDS 3547 4180 . - 1 ID=cds.g13926.t1;Parent=g13926.t1 NODE_1949_length_8389_cov_40.1113 . three_prime_UTR 2764 3546 . - . ID=g13926.t1.utr3p1;Parent=g13926.t1 #PROT g13926.t1.1.5b6be70a g13926 MSKTFFDDIAASKWQTRKECLEGLLALVSKPKAAPGEYGELVRCLSKAVSDSNVVVVALAVQCIGGLAKGLRTNFSHYAVGALAVLLRKFKEKKTNVVAALRIAVDAAGISCPFANLAEETAACLDDKNPSVKAETALWLGRILRETPRSDITKPVLKQLIAVLILRLDDGVPEVREAAMEALGVSMKAVGEAAVMPYLADIDKTKLAKIQEHCQNTVLSPSVLRAAIRAAKAAKAKEAAKANGTAPAKGAPAGKAAPGGAKKAPAKKVAGAPAASAPAKKTSAAPAKAEEFPEPAVARSASVSEKKTGPVAAAPTSLTLKKTSAAGAKASDSPADSRPKTAVSADSVRAKAAGAQEEDGPALLVGEAKEVRMEKEKKNILLRWTFEAPRDEFVVQLKDQMQPILSRSVFTQLFHEDFKHHIAGMGVLATGLTSPAEGVDAPLKAAGLANADLLLRYVTLRFFDTNTSVMLKCLELIRALFTVLDHDAYHLSEYEAYAFIPYLVMRVGDKFENVRKDIRSLFRVLCNVYPASKLFGYLLDGLKIKNARSRTELLEELATLIQRHGIAVCQPSPAKTLPQVAIHVGDRDNGVRSAAINVIIEAHALVGDAVWKYAGEMSQKDRDFIEERIKRNTAVPKKSAAAPAAKQAPTVPEPAVFESVQEPVAAAPAKAAAPSAPKTPSKGGVRARVISKTGGLPMPASVVAASNAHADAEIDVPTMTIPAPAPVAAPAPAARKAFSLDFEFDAPISTLSSMPSLRPTSADSEESTKPAAPPAPTAAHTAIPLRPSSAENVNNAQPQSQPPAKVQQKQQQQMPTKSPVAIAPSPSGRRFKSVDLYVTQVNSDDLQTSNAALKQIEAILAAESDTGASVRGHEDALLGAITLQLRLVFLQHIPAANQSLSASGDAQSPVMRVLRRLISVLLAFFRCTPLAMGVKGDVLEPLTSELMHRLLDDSLGKMKDGPQIVRAMNGLAIKVLESSDRNTMFSVLLQMLSKSCTQHPTTKYCELVMKCMWKLTRALPQIAGSIDKDRLVADCELFLRTHPPSSRPVSTGEDLPLRTVKTLLHATVGDSHPTVTVVDAVPAEQHSAPVNAKKDAFAVDVQAAAAPIVAGATSVSSSSSTPAADSSVSPVVAGYMERLKSLRSKYETLRGGETGIGPLGLPTSAGHAHVTSPSRSTLEAPSSGLGSTRTSPRIPPAEPLDVGPKMISASNAVTSAEYAQQQSEANATAKSLDLIRQRLERIKATAMH* #PROT g13926.t1 g13926 MSKTFFDDIAASKWQTRKECLEGLLALVSKPKAAPGEYGELVRCLSKAVSDSNVVVVALAVQCIGGLAKGLRTNFSHYAVGALAVLLRKFKEKKTNVVAALRIAVDAAGISCPFANLAEETAACLDDKNPSVKAETALWLGRILRETPRSDITKPVLKQLIAVLILRLDDGVPEVREAAMEALGVSMKAVGEAAVMPYLADIDKTKLAKIQEHCQNTVLSPSVLRAAIRAAKAAKAKEAAKANGTAPAKGAPAGKAAPGGAKKAPAKKVAGAPAASAPAKKTSAAPAKAEEFPEPAVARSASVSEKKTGPVAAAPTSLTLKKTSAAGAKASDSPADSRPKTAVSADSVRAKAAGAQEEDGPALLVGEAKEVRMEKEKKNILLRWTFEAPRDEFVVQLKDQMQPILSRSVFTQLFHEDFKHHIAGMGVLATGLTSPAEGVDAPLKAAGLANADLLLRYVTLRFFDTNTSVMLKCLELIRALFTVLDHDAYHLSEYEAYAFIPYLVMRVGDKFENVRKDIRSLFRVLCNVYPASKLFGYLLDGLKIKNARSRTELLEELATLIQRHGIAVCQPSPAKTLPQVAIHVGDRDNGVRSAAINVIIEAHALVGDAVWKYAGEMSQKDRDFIEERIKRNTAVPKKSAAAPAAKQAPTVPEPAVFESVQEPVAAAPAKAAAPSAPKTPSKGGVRARVISKTGGLPMPASVVAASNAHADAEIDVPTMTIPAPAPVAAPAPAARKAFSLDFEFDAPISTLSSMPSLRPTSADSEESTKPAAPPAPTAAHTAIPLRPSSAENVNNAQPQSQPPAKVQQKQQQQMPTKSPVAIAPSPSGRRFKSVDLYVTQVNSDDLQTSNAALKQIEAILAAESDTGASVRGHEDALLGAITLQLRLVFLQHIPAANQSLSASGDAQSPVMRVLRRLISVLLAFFRCTPLAMGVKGDVLEPLTSELMHRLLDDSLGKMKDGPQIVRAMNGLAIKVLESSDRNTMFSVLLQMLSKSCTQHPTTKYCELVMKCMWKLTRALPQIAGSIDKDRLVADCELFLRTHPPSSRPVSTGEDLPLRTVKTLLHATVGDSHPTVTVVDAVPAEQHSAPVNAKKDAFAVDVQAAAAPIVAGATSVSSSSSTPAADSSVSPVVAGYMERLKSLRSKYETLRGGETGIGPLGLPTSAGHAHVTSPSRSTLEVGCAVLSLYVCVVCVSM* # PASA_UPDATE: g13925.t1, single gene model update, valid-1, status:[pasa:asmbl_3082,status:12], valid-1 NODE_1949_length_8389_cov_40.1113 . gene 340 1798 . - . ID=g13925;Name=g13925.t1 NODE_1949_length_8389_cov_40.1113 . mRNA 340 1798 . - . ID=g13925.t1;Parent=g13925;Name=g13925.t1 NODE_1949_length_8389_cov_40.1113 . five_prime_UTR 1620 1798 . - . ID=g13925.t1.utr5p1;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . exon 1495 1798 . - . ID=g13925.t1.exon1;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . CDS 1495 1619 . - 0 ID=cds.g13925.t1;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . exon 1100 1381 . - . ID=g13925.t1.exon2;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . CDS 1100 1381 . - 1 ID=cds.g13925.t1;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . exon 796 845 . - . ID=g13925.t1.exon3;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . CDS 796 845 . - 1 ID=cds.g13925.t1;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . exon 340 512 . - . ID=g13925.t1.exon4;Parent=g13925.t1 NODE_1949_length_8389_cov_40.1113 . CDS 340 512 . - 2 ID=cds.g13925.t1;Parent=g13925.t1 #PROT g13925.t1 g13925 MGGEMGVEKEMKMGTTGTMFPQVCEFLPSCDTARRLYFLSNSPLLACPLCQRRISDTITARDSQRTDCASTSLETDCRPSLSPNDGTCIVGDACQERIALGGYCGSSRVKIDSPLVDGHKQPRSLLVKTTYGVFHRDYTSSALLHVGVSNSQGTVYNFDEHGFHRDGDRWEEAIAVSLTEGESNLCDSDFDGALEMYANACTGDRALST* # PASA_UPDATE: g12920.t1, single gene model update, valid-1, status:[pasa:asmbl_5128,status:3], valid-1 NODE_2857_length_4934_cov_43.1836 . gene 190 2447 . + . ID=g12920;Name=g12920.t1 NODE_2857_length_4934_cov_43.1836 . mRNA 190 2447 . + . ID=g12920.t1;Parent=g12920;Name=g12920.t1 NODE_2857_length_4934_cov_43.1836 . five_prime_UTR 190 269 . + . ID=g12920.t1.utr5p1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . exon 190 362 . + . ID=g12920.t1.exon1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . CDS 270 362 . + 0 ID=cds.g12920.t1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . exon 650 737 . + . ID=g12920.t1.exon2;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . CDS 650 737 . + 0 ID=cds.g12920.t1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . exon 1266 1430 . + . ID=g12920.t1.exon3;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . CDS 1266 1430 . + 2 ID=cds.g12920.t1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . exon 1963 2134 . + . ID=g12920.t1.exon4;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . CDS 1963 2134 . + 2 ID=cds.g12920.t1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . exon 2355 2447 . + . ID=g12920.t1.exon5;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . CDS 2355 2439 . + 1 ID=cds.g12920.t1;Parent=g12920.t1 NODE_2857_length_4934_cov_43.1836 . three_prime_UTR 2440 2447 . + . ID=g12920.t1.utr3p1;Parent=g12920.t1 #PROT g12920.t1 g12920 MFTLFSGFWQYVTRKDEYYVLILGLDNAGKTTLLEQLKHFYNPKYKGIPLEKITTTVGLNVAKVDAKKACLIFWDLGGQIELHSLWDKYYSEAHGVMYVIDSTDPARFEASRSAFESMVQHPYLEGVPLLILANKQDVSTALTVQDIKDVFNASSRLVGQRDCKVQPVCAITGEGLASGMTWLLDGMIKNISRPPKLREV* # ORIGINAL: g12921.t1 original gene structure, not modified by PASA NODE_2857_length_4934_cov_43.1836 AUGUSTUS gene 3829 4934 . + . ID=g12921;Name=g12921.t1 NODE_2857_length_4934_cov_43.1836 AUGUSTUS mRNA 3829 4934 . + . ID=g12921.t1;Parent=g12921;Name=g12921.t1 NODE_2857_length_4934_cov_43.1836 AUGUSTUS exon 3829 4934 . + . ID=g12921.t1.exon1;Parent=g12921.t1 NODE_2857_length_4934_cov_43.1836 AUGUSTUS CDS 3829 4934 . + 0 ID=cds.g12921.t1;Parent=g12921.t1 #PROT g12921.t1 g12921 MVTMRDRAPFTEEEILALQIDDVDGQYTSRSRSFFDGSEDKIVVPSKGKCYKFDQSGNEWQADFETSMSKDSVIVVLGGGGPLGQALARELRLRGHHVHLHMSKHVTDFQDNIVPNAATNPLLEFDGMRIRVVFLLAWDTRQPSADMVAAAAKYFAGRQIPVVFPSTVQVSNSDSWFGASKLEAERLVQTSAGKYANIVRLPDVFGVERWHVGESKQHFVGKILNKCIRGDLRVTASDFKIHTGGAFRQLLYADDVATTLVNTFAPSVDFHPTALSGPVSVDGIPIVRTVTASATVGTPSSGWAEIDSVADDINVAWGRFVDSMAESDRRTEAGAESEHGPQFARRECVPASVIATLRAAAGRALNAS # ORIGINAL: g12420.t1 original gene structure, not modified by PASA NODE_3494_length_3338_cov_35.3044 AUGUSTUS gene 95 2665 . + . ID=g12420;Name=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS mRNA 95 2665 . + . ID=g12420.t1;Parent=g12420;Name=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS exon 95 367 . + . ID=g12420.t1.exon1;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS CDS 95 367 . + 1 ID=cds.g12420.t1;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS exon 513 984 . + . ID=g12420.t1.exon2;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS CDS 513 984 . + 1 ID=cds.g12420.t1;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS exon 1204 1279 . + . ID=g12420.t1.exon3;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS CDS 1204 1279 . + 0 ID=cds.g12420.t1;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS exon 1733 1950 . + . ID=g12420.t1.exon4;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS CDS 1733 1950 . + 2 ID=cds.g12420.t1;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS exon 2264 2665 . + . ID=g12420.t1.exon5;Parent=g12420.t1 NODE_3494_length_3338_cov_35.3044 AUGUSTUS CDS 2264 2665 . + 0 ID=cds.g12420.t1;Parent=g12420.t1 #PROT g12420.t1 g12420 FQKVFQGIVGLAHYDGTGRLELTTLLNSMDAAKAANLTLMPAYSPSTHFIIPYMPYAYEAAYVIALGADAALSHGFDPATNGSALLSFMKDVRFDGPTGVTHFEGNGDRTARYNLINLSPSGVRVVGNLLQTNATAPLPLWNITGRITWPDGSSRVPLDGLCRPVCAHGACMLSDAGGVLRQACVCDSGWEGESCNAPSAADTMHVVRLVVPVVVVASASVAVTVGCLALVMQKKKKQLLARERIERQVIDFHELVMEDFIGRGAFGDVYKATWRGTTVAVKRIMPERLRPHFAGQRAARRGVGVRLPGVQLGVPMGDGATQQQRIRMADRTAVMCTAGLQQSLDKASSDGTVEPMALPPQRKLSLGVRRAPQSDEFVPSTGHSRRAYGSKMPLSSAEMQRREFWVRRAWRSIQRALCGTAVLPMHVRQYNAGKRLSRMGAGVGMGSPASSASPNGSALATDAQRLEAFHHEVTVWVCV* # ORIGINAL: g9850.t1 original gene structure, not modified by PASA NODE_2813_length_5074_cov_35.0906 AUGUSTUS gene 271 4743 . - . ID=g9850;Name=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS mRNA 271 4743 . - . ID=g9850.t1;Parent=g9850;Name=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 4682 4743 . - . ID=g9850.t1.exon1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 4682 4743 . - 0 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 3954 4463 . - . ID=g9850.t1.exon2;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 3954 4463 . - 1 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 3581 3740 . - . ID=g9850.t1.exon3;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 3581 3740 . - 1 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 3021 3313 . - . ID=g9850.t1.exon4;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 3021 3313 . - 0 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 2788 2856 . - . ID=g9850.t1.exon5;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 2788 2856 . - 1 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 2254 2573 . - . ID=g9850.t1.exon6;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 2254 2573 . - 1 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 1886 1983 . - . ID=g9850.t1.exon7;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 1886 1983 . - 2 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 1204 1238 . - . ID=g9850.t1.exon8;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 1204 1238 . - 0 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 662 1007 . - . ID=g9850.t1.exon9;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 662 1007 . - 1 ID=cds.g9850.t1;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS exon 271 321 . - . ID=g9850.t1.exon10;Parent=g9850.t1 NODE_2813_length_5074_cov_35.0906 AUGUSTUS CDS 271 321 . - 0 ID=cds.g9850.t1;Parent=g9850.t1 #PROT g9850.t1 g9850 MSDVFSAQVLIDLCLSYNWKSVAVLVVMDSYGSGLVTRFSTLAKAANITIRHMEQISGLVTVDDLPGEARTSLSNIAAKELRIVLMFLTSTRGIQLVMQQANQLGLLDGSRGRYLFVGAETAVSDTIGRNPVGQLDSSIIANVAGVVGVRAASGSGAMYNRYLALWSTLSQAQYPDADGNRNGTDFFGPASYDAVIAMASGLHNMVYANRTPYDFPGLLAQLKQLRFQGVSGAVSFDANGDRNTALFDVLNVDINGIPRLIGRWNSSNGLAMTPDVRITWPGNFSTPPIDGSCPNDCGSNGLCDHNSGKCDCYTGHVGASCSQFRPLAVSSSTTTSSVNCLRFVYFNVTASNPGDTIKLQLTTLKDLSSASVAVVLLVAKAADIGNPKVDPTALNRLLVTRQQQLGNESDPVSSLSGYASGASSSKTQSVQSFTLPVTESTVGAYVVALYGTGYVCPASYELSVVVQTPTSGSNIGRNIGIAVGVIVPVFIMIVLGIIAYHRQKGAYGKVYKGKYRGTAVAIKTISQNPVQSRKLLQKYFPNPLARLSQLSFRKSGGSTQTRNVSDGTRTSNESASGGKNAMSRVFGTTQQQQKTFYNSVNLATRPKPSSRDNNAKEAELLYKQSVADFLQEVDTMVSLRHPNIVLFM # ORIGINAL: g8070.t1 original gene structure, not modified by PASA NODE_2927_length_4721_cov_39.4128 AUGUSTUS gene 3413 4618 . + . ID=g8070;Name=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS mRNA 3413 4618 . + . ID=g8070.t1;Parent=g8070;Name=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS exon 3413 3499 . + . ID=g8070.t1.exon1;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS CDS 3413 3499 . + 0 ID=cds.g8070.t1;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS exon 3626 3857 . + . ID=g8070.t1.exon2;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS CDS 3626 3857 . + 0 ID=cds.g8070.t1;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS exon 4000 4122 . + . ID=g8070.t1.exon3;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS CDS 4000 4122 . + 2 ID=cds.g8070.t1;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS exon 4271 4618 . + . ID=g8070.t1.exon4;Parent=g8070.t1 NODE_2927_length_4721_cov_39.4128 AUGUSTUS CDS 4271 4618 . + 2 ID=cds.g8070.t1;Parent=g8070.t1 #PROT g8070.t1 g8070 MLIIKASYGDVRRRFVVDSSVSWDELSVKIREAFNLSQVWVRYRDSDNDLVTVASDGDLRVAVSSCAMTANMYMLTFEVSPPHTKEMKAPPTEHGVQCKGCQSWIRGVRYRCGMCDDFDLCDGCESVVVHDESHVFVKLRKMVSCKSGPLLLANFVPITAIPRDCAHAWQLQQQASLASATLEQADIASRTRTDALPQRPRSHSVGDGVSASSDVKAYLARFVRDVACADGTVVEPNARFVKVWRMENNGIESWPRGTRLVSA # PASA_UPDATE: g8069.t1, single gene model update, valid-1, status:[pasa:asmbl_5249,status:12], valid-1 NODE_2927_length_4721_cov_39.4128 . gene 606 1754 . + . ID=g8069;Name=g8069.t1 NODE_2927_length_4721_cov_39.4128 . mRNA 606 1754 . + . ID=g8069.t1;Parent=g8069;Name=g8069.t1 NODE_2927_length_4721_cov_39.4128 . exon 606 756 . + . ID=g8069.t1.exon1;Parent=g8069.t1 NODE_2927_length_4721_cov_39.4128 . CDS 606 756 . + 0 ID=cds.g8069.t1;Parent=g8069.t1 NODE_2927_length_4721_cov_39.4128 . exon 1050 1754 . + . ID=g8069.t1.exon2;Parent=g8069.t1 NODE_2927_length_4721_cov_39.4128 . CDS 1050 1690 . + 2 ID=cds.g8069.t1;Parent=g8069.t1 NODE_2927_length_4721_cov_39.4128 . three_prime_UTR 1691 1754 . + . ID=g8069.t1.utr3p1;Parent=g8069.t1 #PROT g8069.t1 g8069 MDLDNLAGSDASGNDGEGSDDGEDEDDDMGDRLDIPLPQDPRVDDIPMPDGPPPGPPPPRPPGMPPGPPPGPPPVRPGMHPGASAGGIFPPGPPPSHHPMGMGPPRGPPQHSPYGPPPVQPAYSQQPMPPQHQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQLQQQPAEKRPQPDGPVQATISAKPKIRNMQEEVRRLVPTTLLVRRAQGPIKAKPAPRPLNAPLAHATSAPGRPAAGQTQQGPKVTTDDAYNDFMKDLEGLI* # PASA_UPDATE: g9214.t1, single gene model update, valid-1, status:[pasa:asmbl_2970,status:12],[pasa:asmbl_2972,status:12],[pasa:asmbl_2973,status:12], valid-1 NODE_1902_length_8645_cov_39.0292 . gene 4869 8359 . + . ID=g9214;Name=g9214.t1 NODE_1902_length_8645_cov_39.0292 . mRNA 4869 8359 . + . ID=g9214.t1;Parent=g9214;Name=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 4869 5141 . + . ID=g9214.t1.exon1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 4869 5141 . + 0 ID=cds.g9214.t1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 5340 5414 . + . ID=g9214.t1.exon2;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 5340 5414 . + 0 ID=cds.g9214.t1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 5760 5966 . + . ID=g9214.t1.exon3;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 5760 5966 . + 0 ID=cds.g9214.t1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 6279 6406 . + . ID=g9214.t1.exon4;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 6279 6406 . + 0 ID=cds.g9214.t1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 6694 7915 . + . ID=g9214.t1.exon5;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 6694 7915 . + 1 ID=cds.g9214.t1;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . exon 8216 8359 . + . ID=g9214.t1.exon6;Parent=g9214.t1 NODE_1902_length_8645_cov_39.0292 . CDS 8216 8359 . + 0 ID=cds.g9214.t1;Parent=g9214.t1 #PROT g9214.t1 g9214 MSAPGSMKRPREDEDDDLLLSPTPTAAKRLRADVDEDALMEFDASDAIDADAEIAPANDSDDGHGGGGGGGAADDDEDEVDPLDAFMAGVQAEVQTLKASDNAKRITQQQQPKGTKGAGAKRRGELMVNDADAMEYSSEGSEDEIKAVGKPKKKELKLVDHTKIQYRQFSKRFYVEVPEIARMTKEEVDLARMELENIKVKGAAPKPVKNWSQCGVSSKIMQVLQKLKYDKPTPIQSQAVPAIMDGCDLIGIAKTGSGKTLAFLLPMFRHILDQPPLGQDEGPIGIIMTPTRELATQIYAECRKFAKVCGLRTVCVYGGAGVSEQIAELRKGAEIVICTPGRMIEMLTLNSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMRIVDNIRPDRQTVLFSATFPRQMESLARKILIRPVEILVGGRSVVCKDVEQNVVVLEEEQKFVKLLELLGHWYEKGSCLAFVDRQESADGLLKELLRHGYPCLSLHGGMDQGDRDSVISDFRNGVIKLLIATSVAARGLDVKNLNLVVNFDAPNHYEDYVHRVGRTGRAGNKGTAFTFITPDQDKLAPDVAKALEASGTPIPAELKQLVDAFAEKKKQGKDTGGGRFTIRTGKGFKFDDEEEQRREAMRKMQKQAAGLNDSGDEDEKEGPSQLDEEIEAMLSAGKKKPATTKEGMALHSCS* # PASA_UPDATE: g9213.t1, single gene model update, valid-1, status:[pasa:asmbl_2971,status:3], valid-1 NODE_1902_length_8645_cov_39.0292 . gene 906 4441 . - . ID=g9213;Name=g9213.t1 NODE_1902_length_8645_cov_39.0292 . mRNA 906 4441 . - . ID=g9213.t1;Parent=g9213;Name=g9213.t1 NODE_1902_length_8645_cov_39.0292 . five_prime_UTR 4383 4441 . - . ID=g9213.t1.utr5p1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 4368 4441 . - . ID=g9213.t1.exon1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 4368 4382 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 3970 4144 . - . ID=g9213.t1.exon2;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 3970 4144 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 3642 3742 . - . ID=g9213.t1.exon3;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 3642 3742 . - 2 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 3197 3403 . - . ID=g9213.t1.exon4;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 3197 3403 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 2577 2747 . - . ID=g9213.t1.exon5;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 2577 2747 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 2285 2359 . - . ID=g9213.t1.exon6;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 2285 2359 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 1846 2079 . - . ID=g9213.t1.exon7;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 1846 2079 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 1605 1742 . - . ID=g9213.t1.exon8;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 1605 1742 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . exon 906 1324 . - . ID=g9213.t1.exon9;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . CDS 1130 1324 . - 0 ID=cds.g9213.t1;Parent=g9213.t1 NODE_1902_length_8645_cov_39.0292 . three_prime_UTR 906 1129 . - . ID=g9213.t1.utr3p1;Parent=g9213.t1 #PROT g9213.t1 g9213 MAALRGLRQVCAQASLPSLSRAAVRTVGASSSTARVARAYSSGIVGHQPLSVLTDEEQAMRDAVHRFARDVIQPKVAEMDRNAKLDPAVLQGMFDQGLMGVEIEEEFGGTNASFMSSIVVIEEIARVDPAVAVICDIQNTLIDTLFRKLGTKEQKAKYLPQLAKNMVGSFCLSEPVSGSDAFALQTRAERRGDDYIINGSKCWISNSEEAGVFLVMANADPSKGYRGITCFIVDRDTPGFEIGKKEDKLGIRASSTCVLNFTDMRVPASNILGEFGQGYKYAITMLNEGRIGIGAQMVGLAQGVFDVTLPYLFQRKQFGKPIADFQAMQHQRAQIATEIEAARLLVYNAARRKEHGLPFVKEAAMAKLYSSQVAEQASSKCIEWLGGVGFTKDFPAEKFFRDCKIGAIYEGTSNIQLNTIAKLVDADYGASSKGSK* # PASA_UPDATE: g1038.t1, single gene model update, valid-1, status:[pasa:asmbl_8562,status:12],[pasa:asmbl_8563,status:12], valid-1 NODE_627_length_19995_cov_42.0532 . gene 2629 5234 . + . ID=g1038;Name=g1038.t1 NODE_627_length_19995_cov_42.0532 . mRNA 2629 5234 . + . ID=g1038.t1;Parent=g1038;Name=g1038.t1 NODE_627_length_19995_cov_42.0532 . five_prime_UTR 2629 2743 . + . ID=g1038.t1.utr5p1;Parent=g1038.t1 NODE_627_length_19995_cov_42.0532 . exon 2629 5234 . + . ID=g1038.t1.exon1;Parent=g1038.t1 NODE_627_length_19995_cov_42.0532 . CDS 2744 4819 . + 0 ID=cds.g1038.t1;Parent=g1038.t1 NODE_627_length_19995_cov_42.0532 . three_prime_UTR 4820 5234 . + . ID=g1038.t1.utr3p1;Parent=g1038.t1 #PROT g1038.t1 g1038 MRASCIAAACVIFALVFASAQASHDDGDFPDGGASPVDFSDKEVADALAFAIDTVNARSNSLFRTVLVRPISGTQQVVNGIKYCLTFEAGRSHLCLNTPSAAQDLSLCAVDADSVQQYTVTVVAHASGEANFIALGDVQINPTAPVALGAGAAEPVEPDFPHVQDWTNPTVVGALEAAVERINAMSNSALRNVLVKPVSGSLQTVSGILFRFVLETAESSSCPKSGSKKTLVECPVAAATAHEQWKVKVLAVPWLRTFEVEGEPILVSASQGSSSAASDDAIINALAALLFTTGEKPFDGISLPEMPSVEDPALPEMPSVEDPALPEMPSVEDPALPEMPSVEDPALPEMPSVEDPALPEMPSVEDPALPEMPTEDEPSLPEVPVVVASTDLPQVDFNDQTVVDALHYIVGKIQLMTAYGGLAVFVKGINGTQETGASSGVNVYRLWVQMGVSVKCKPTDTAYSSADCPMDDDSQLQLWRVVVQYKAAEAAGKQFSLAEEPVMVTPSALDSDLSQADVQAAIAWLVSKINEGYNSVNKAVLVKAVSASKQVVAGNLYRLIVDVGLSTKCAKTSTLTDLVNCPVEGGAFERYKASVLYKSWANPQYVFSSAPQKIGDSGTILQSASPSGSSSGSKGGSSTTIILAAAVPGCAVIVVGAAAWIVRQRRSGKDHLYRPLEEGPESHQYKLMNDD* # ORIGINAL: g1039.t1 original gene structure, not modified by PASA NODE_627_length_19995_cov_42.0532 AUGUSTUS gene 5697 6752 . - . ID=g1039;Name=g1039.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS mRNA 5697 6752 . - . ID=g1039.t1;Parent=g1039;Name=g1039.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 5697 6752 . - . ID=g1039.t1.exon1;Parent=g1039.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 5697 6752 . - 0 ID=cds.g1039.t1;Parent=g1039.t1 #PROT g1039.t1 g1039 MATREEFDAIISASCDNVEDVCQALQRLAAGKPVTLDCVPSSTALDVTTPTLFGADARTSTLTPAASKTSGARGPSSETARRQSGIPPFGKKGDPFAFSIDDVAAPPVVTLNSYRVESRKGATPAKDALLHRTPARDGALLSRTNSATKRGMRESDIRDNEDCPDVVMVPADDDHDLFLASQEDVAQVHLQAAVSKLKLLGGRNPSAAESGDTQDQPPNGDGDCSGDDSDGQVRINGSSEHSQRQQSTQQQQQQQQQQQQKQQQKQQQQQQQQQQQLQQQHSNDGASAGGGGEVGEQTGRRRVGRPRKIRHDQEDSQNLESTEYLLEELAMDDARDGLKWAIMTLTKDKLV* # PASA_UPDATE: g1037.t1, single gene model update, valid-1, status:[pasa:asmbl_8561,status:12],[pasa:asmbl_8566,status:12], valid-1 NODE_627_length_19995_cov_42.0532 . gene 187 1903 . + . ID=g1037;Name=g1037.t1 NODE_627_length_19995_cov_42.0532 . mRNA 187 1903 . + . ID=g1037.t1;Parent=g1037;Name=g1037.t1 NODE_627_length_19995_cov_42.0532 . exon 187 436 . + . ID=g1037.t1.exon1;Parent=g1037.t1 NODE_627_length_19995_cov_42.0532 . CDS 187 436 . + 0 ID=cds.g1037.t1;Parent=g1037.t1;5_prime_partial=true NODE_627_length_19995_cov_42.0532 . exon 689 1903 . + . ID=g1037.t1.exon2;Parent=g1037.t1 NODE_627_length_19995_cov_42.0532 . CDS 689 1773 . + 2 ID=cds.g1037.t1;Parent=g1037.t1 NODE_627_length_19995_cov_42.0532 . three_prime_UTR 1774 1903 . + . ID=g1037.t1.utr3p1;Parent=g1037.t1 #PROT g1037.t1 g1037 VDNGWGGYVVIDGNGDSPAKVDTSDITMESGKLNFKADLVRGWHVIEYVGSENQMGSTKQSIFFHRGTDAKVVVSQDNLRNAARAAFRVASTSADAFARLASASSVAYATSVSVADAVEARRSASEAASAEAYASSVDVAVSVASVASFASEASRQSAADVSASRTSVDVAVSAASVADVLASIDNVRASAATQASIASDNAAAATAASQASMASRATQASDVAARATASIASDAAARATASVDSARAAAATQASVIASLAAVAASSSVDAARAAASQREAEKNAAASSSVDSARGVASQREANKNALASSSVDSVRVVASQREADKNAAASSASARAAVVTSTVAPAQSATATVVGAVGNPAGPPVTGSQSSGGGSNTAAVAGGVAGGVIACALIAGVAYYVVKQRANPKGFVQRSASKKYLGGDEAFNGTVIRNELFQDTYA* # ORIGINAL: g1040.t1 original gene structure, not modified by PASA NODE_627_length_19995_cov_42.0532 AUGUSTUS gene 7659 10616 . + . ID=g1040;Name=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS mRNA 7659 10616 . + . ID=g1040.t1;Parent=g1040;Name=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 7659 7871 . + . ID=g1040.t1.exon1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 7659 7871 . + 0 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 8045 8125 . + . ID=g1040.t1.exon2;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 8045 8125 . + 0 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 8236 8433 . + . ID=g1040.t1.exon3;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 8236 8433 . + 0 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 8631 8897 . + . ID=g1040.t1.exon4;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 8631 8897 . + 0 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 9041 9156 . + . ID=g1040.t1.exon5;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 9041 9156 . + 0 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 9377 9639 . + . ID=g1040.t1.exon6;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 9377 9639 . + 1 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 9879 10017 . + . ID=g1040.t1.exon7;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 9879 10017 . + 2 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 10269 10444 . + . ID=g1040.t1.exon8;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 10269 10444 . + 1 ID=cds.g1040.t1;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 10585 10616 . + . ID=g1040.t1.exon9;Parent=g1040.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 10585 10616 . + 2 ID=cds.g1040.t1;Parent=g1040.t1 #PROT g1040.t1 g1040 MHEQWDAAEGGDLDVAAAASRFASIDLDAPQDWSYRGEGAANIVVGYVGSDPTLVGATVIHNTGLFVFVHDPFSPLRLHSYLAGVMAPLIGRRFVHAGSLVRLHEGFVAALDARIRGERPTKRLKMELDPTCTHGLLVRDVGLPFAHVPLSAGEDSPTICFEIKPKWGFLPSSPFVSRERAHKTTTCRFCMHQQLKMTTTDEWPCVSRYCPMDLYSGDADRTGLALRNMISTPQNNARVFADAHLVYTGDHQQVDIPAHDLRRNLASVLSTAFVDTGSNSDIDYGDDHFVERGPFPHFSRVVARLLLENGVLSDIRATQMMDARDIEGCISLFRTLEDNGAATEGSLAWLWHGEYERPEWAQIVRDELAHRTASSHSAVEVDVSKHMPADQLSFNQMANILARFIVSVTAKDCSVMVTLRHLPDTAGVHKDASVPVFTDPESGRRYLYSVTVVDLDPKAFRKVPSYAKDDARIADHYADWERAGAAFRAVGVSG* # PASA_UPDATE: g1043.t1, single gene model update, valid-1, status:[pasa:asmbl_8565,status:12], valid-1 NODE_627_length_19995_cov_42.0532 . gene 14469 17473 . - . ID=g1043;Name=g1043.t1 NODE_627_length_19995_cov_42.0532 . mRNA 14469 17473 . - . ID=g1043.t1;Parent=g1043;Name=g1043.t1 NODE_627_length_19995_cov_42.0532 . exon 16399 17473 . - . ID=g1043.t1.exon1;Parent=g1043.t1 NODE_627_length_19995_cov_42.0532 . CDS 16399 17473 . - 0 ID=cds.g1043.t1;Parent=g1043.t1 NODE_627_length_19995_cov_42.0532 . exon 14469 16078 . - . ID=g1043.t1.exon2;Parent=g1043.t1 NODE_627_length_19995_cov_42.0532 . CDS 14736 16078 . - 2 ID=cds.g1043.t1;Parent=g1043.t1 NODE_627_length_19995_cov_42.0532 . three_prime_UTR 14469 14735 . - . ID=g1043.t1.utr3p1;Parent=g1043.t1 #PROT g1043.t1 g1043 MDPLDSFLGDGALSSNLFSDDAMLNDPGFVDQLTQFCSDVLLPADLNFGDAGLTNAPEPAWQPSNLEHLKSLPESFFMLAPNLIPDLSAQPFNPFASLGMLGGFGDVTGGLGPQVKMEGAIDPSVAYGGAVDPSSFIAAQAIQLQILQQQQAIKLQQLHTLHLRQRQVMEQQRLREQAEQQQQLQQQQQQQQQQLTTQQGKQKKSALSASSLASSGAQQQQTLRARSTAAAVHQQPIAAPLAQQQPAPPPPAVPSFESFMGGIGGSVDGFGEEDREGKQKSHLVAEQKRRENIADGFASLKGTMPHLKASASRAVILRKAAEFIQLLQQQNAQLRQKAVALGRKPSTADEGSAMDVSGGTTAAEDLVELLEKQLQIRTREPSEKRLNFMYRDEGELVQLGRIGDVDDLFSQYAAGASTLKLSLFVPNPLHAAHATDAPPVPTLASAAAQVQAANHAHLQHQRNVIEQQQLQLAHIQHLRHLQQMALELGQPLPQELLAAPLFAQQHGMSTGHSLAHAFSQHHASAQSASGAADHVPNEDEDHGAVNEVEKAEEKVRVVPDEPPEPLATEVELKKVVGLFNELQRHPGMALGGARFQTLHWQKARVYRFMKACNWSVKDAQKMLEAHFAWLAAYRPECISEADIANELRREKLYWHKTDAAGRPCLVFRVRKHYLAQRDKYETIKFVVYRIQQFVNFLADHPSRRFVFLYDRRGCTRANSDVPMFKKFLEIFLANYPETLHRMYVIEPDFVFKYGWSLCRRFCSPAFREKIIMLGDDWRTELTQCFGANNLEQEFGGCAPNVTSSQ* # ORIGINAL: g1042.t1 original gene structure, not modified by PASA NODE_627_length_19995_cov_42.0532 AUGUSTUS gene 12287 14116 . + . ID=g1042;Name=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS mRNA 12287 14116 . + . ID=g1042.t1;Parent=g1042;Name=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 12287 12289 . + . ID=g1042.t1.exon1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 12287 12289 . + 0 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 12437 12603 . + . ID=g1042.t1.exon2;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 12437 12603 . + 0 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 12761 12822 . + . ID=g1042.t1.exon3;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 12761 12822 . + 1 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 12947 12978 . + . ID=g1042.t1.exon4;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 12947 12978 . + 2 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 13397 13438 . + . ID=g1042.t1.exon5;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 13397 13438 . + 0 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 13761 13811 . + . ID=g1042.t1.exon6;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 13761 13811 . + 0 ID=cds.g1042.t1;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS exon 14015 14116 . + . ID=g1042.t1.exon7;Parent=g1042.t1 NODE_627_length_19995_cov_42.0532 AUGUSTUS CDS 14015 14116 . + 0 ID=cds.g1042.t1;Parent=g1042.t1 #PROT g1042.t1 g1042 MSSQIYIRVKRKKTTVFLDTTPSEQIVSLKRRLEPIVKVAPENIRLVLNDKPLEDNKSVGDSKIDNDELVALCFRKDDGDWEEVDLTPVPCSFCLPQVSICWVCQLPRVLGAYIQDCAVGGSERNQQLLIQTPGVARDMRMWRTGDVMGVVK* # PASA_UPDATE: g1041.t1, single gene model update, valid-1, status:[pasa:asmbl_8560,status:3], valid-1 NODE_627_length_19995_cov_42.0532 . gene 10852 11908 . - . ID=g1041;Name=g1041.t1 NODE_627_length_19995_cov_42.0532 . mRNA 10852 11908 . - . ID=g1041.t1;Parent=g1041;Name=g1041.t1 NODE_627_length_19995_cov_42.0532 . five_prime_UTR 11858 11908 . - . ID=g1041.t1.utr5p1;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . exon 11769 11908 . - . ID=g1041.t1.exon1;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . CDS 11769 11857 . - 0 ID=cds.g1041.t1;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . exon 11471 11577 . - . ID=g1041.t1.exon2;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . CDS 11471 11577 . - 1 ID=cds.g1041.t1;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . exon 10852 11264 . - . ID=g1041.t1.exon3;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . CDS 11056 11264 . - 2 ID=cds.g1041.t1;Parent=g1041.t1 NODE_627_length_19995_cov_42.0532 . three_prime_UTR 10852 11055 . - . ID=g1041.t1.utr3p1;Parent=g1041.t1 #PROT g1041.t1 g1041 MASAGGRFLRNLRKMTVEYCPIGGSSEGVRQFLATKIKDVAKDKPEVVFIALRRLYAHPRIIYEYAGKSNSVGTVPLRNMNMDKVASEVDRLCEFGGRWAPKNERKVTMRPSLQGVWTPATYGNLRPPKETPSA* # ORIGINAL: g2993.t1 original gene structure, not modified by PASA NODE_9817_length_322_cov_137.332_potentialcontaminant AUGUSTUS gene 43 322 . + . ID=g2993;Name=g2993.t1 NODE_9817_length_322_cov_137.332_potentialcontaminant AUGUSTUS mRNA 43 322 . + . ID=g2993.t1;Parent=g2993;Name=g2993.t1 NODE_9817_length_322_cov_137.332_potentialcontaminant AUGUSTUS exon 43 322 . + . ID=g2993.t1.exon1;Parent=g2993.t1 NODE_9817_length_322_cov_137.332_potentialcontaminant AUGUSTUS CDS 43 322 . + 0 ID=cds.g2993.t1;Parent=g2993.t1 #PROT g2993.t1 g2993 MVHALGNPLVHMAYAAYHREYVRALADAYGALRHFVVTKFGRSPFGLYLLNKSLELGGVEEAAVLLRQAREGGMLDVIFGRGSKKGALEDSPS # ORIGINAL: g10812.t1 original gene structure, not modified by PASA NODE_3060_length_4431_cov_43.517 AUGUSTUS gene 1084 3392 . - . ID=g10812;Name=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS mRNA 1084 3392 . - . ID=g10812.t1;Parent=g10812;Name=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 3301 3392 . - . ID=g10812.t1.exon1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 3301 3392 . - 0 ID=cds.g10812.t1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 2898 3037 . - . ID=g10812.t1.exon2;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 2898 3037 . - 1 ID=cds.g10812.t1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 2605 2709 . - . ID=g10812.t1.exon3;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 2605 2709 . - 2 ID=cds.g10812.t1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 1936 2369 . - . ID=g10812.t1.exon4;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 1936 2369 . - 2 ID=cds.g10812.t1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 1572 1675 . - . ID=g10812.t1.exon5;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 1572 1675 . - 0 ID=cds.g10812.t1;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 1084 1270 . - . ID=g10812.t1.exon6;Parent=g10812.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 1084 1270 . - 1 ID=cds.g10812.t1;Parent=g10812.t1 #PROT g10812.t1 g10812 MESLDEFDAAFVVSNTFCRQMTARDYEEEGRIHTKMALCELIAQLETNPQAYLKAQRAKRLDGEDGDILSLIKCRLKGFFSSKADDDEEEKKLMRELENLKEELFKVYFYSQEAKKIDEGASRKSRRLTERNLNAAADSIARIATALPDKETRRPMSGPAGVPTTIPPPAQTAAPIAASSAENLTPLGIVLAAVPAAHGRAQSGPPPPPPPPPPTAPIVASKGILAVAETLTASVSSKLTARRPLGTASGADDKENQCNGASNVRGTKDGLLKEIAKGSECKKRLKKTQLNRSPGGTPERKRRKPSPDAAAKGLKPSIGEALLRKFKNTRTPSPDCSPTRSEQASRLDDSFGC* # ORIGINAL: g10813.t1 original gene structure, not modified by PASA NODE_3060_length_4431_cov_43.517 AUGUSTUS gene 3936 4289 . + . ID=g10813;Name=g10813.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS mRNA 3936 4289 . + . ID=g10813.t1;Parent=g10813;Name=g10813.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 3936 3969 . + . ID=g10813.t1.exon1;Parent=g10813.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 3936 3969 . + 0 ID=cds.g10813.t1;Parent=g10813.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS exon 4099 4289 . + . ID=g10813.t1.exon2;Parent=g10813.t1 NODE_3060_length_4431_cov_43.517 AUGUSTUS CDS 4099 4289 . + 2 ID=cds.g10813.t1;Parent=g10813.t1 #PROT g10813.t1 g10813 MADVPTANSEIELLDRVLFRLGMADSDEQLQRTIGNFMAPALLKLASPHEAVKKKVSLVGFPLTRFPLRNCVRE* # PASA_UPDATE: g10811.t1, single gene model update, valid-1, status:[pasa:asmbl_5502,status:12], valid-1 NODE_3060_length_4431_cov_43.517 . gene 2 631 . + . ID=g10811;Name=g10811.t1 NODE_3060_length_4431_cov_43.517 . mRNA 2 631 . + . ID=g10811.t1;Parent=g10811;Name=g10811.t1 NODE_3060_length_4431_cov_43.517 . exon 2 631 . + . ID=g10811.t1.exon1;Parent=g10811.t1 NODE_3060_length_4431_cov_43.517 . CDS 2 247 . + 0 ID=cds.g10811.t1;Parent=g10811.t1;5_prime_partial=true NODE_3060_length_4431_cov_43.517 . three_prime_UTR 248 631 . + . ID=g10811.t1.utr3p1;Parent=g10811.t1 #PROT g10811.t1 g10811 RPPCHTQWVCRTSTKECDDGFFTFASTGCWPKEALDSFTKFSGVVKGWFSETEDAVSGVLSKLFSKRDALDGAAEDVVVVV* # PASA_UPDATE: g4703.t1, single gene model update, valid-1, status:[pasa:asmbl_6508,status:12], valid-1 NODE_3765_length_2794_cov_85.2369 . gene 152 1182 . + . ID=g4703;Name=g4703.t1 NODE_3765_length_2794_cov_85.2369 . mRNA 152 1182 . + . ID=g4703.t1;Parent=g4703;Name=g4703.t1 NODE_3765_length_2794_cov_85.2369 . exon 152 1182 . + . ID=g4703.t1.exon1;Parent=g4703.t1 NODE_3765_length_2794_cov_85.2369 . CDS 152 763 . + 0 ID=cds.g4703.t1;Parent=g4703.t1 NODE_3765_length_2794_cov_85.2369 . three_prime_UTR 764 1182 . + . ID=g4703.t1.utr3p1;Parent=g4703.t1 #PROT g4703.t1 g4703 MHTITTQVHVLAYEYPGYGLAMGRPSEAHVTRAAKATYAFVRHKLHWPAENIVLFGRSVGGGPTMKMATQCMPGGIVLLSAFTSVCDVTRDAFGDLVALLVSDRFVNREAITRVTCPTLFIHGQADALIPYEHSVRLHDLCPATKKQLVTPSKMDHNCFRYDEDVHTPIARFFGLGRGATKGPTPALTIPAECFVSQSAPSTT* # ORIGINAL: g4704.t1 original gene structure, not modified by PASA NODE_3765_length_2794_cov_85.2369 AUGUSTUS gene 1360 2066 . - . ID=g4704;Name=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS mRNA 1360 2066 . - . ID=g4704.t1;Parent=g4704;Name=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS exon 1851 2066 . - . ID=g4704.t1.exon1;Parent=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS CDS 1851 2066 . - 0 ID=cds.g4704.t1;Parent=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS exon 1632 1691 . - . ID=g4704.t1.exon2;Parent=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS CDS 1632 1691 . - 0 ID=cds.g4704.t1;Parent=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS exon 1360 1404 . - . ID=g4704.t1.exon3;Parent=g4704.t1 NODE_3765_length_2794_cov_85.2369 AUGUSTUS CDS 1360 1404 . - 0 ID=cds.g4704.t1;Parent=g4704.t1 #PROT g4704.t1 g4704 MEVLDTDPTVSSIHDVKADSIGADVFRFKAEINFDGRAVTRRMLDGAKFDEILAEVKRFEKPEQMEEFLLSQGSRVVDQLGQEVDRIEQSIKSADPDVRHVDLEIL* # ORIGINAL: g1077.t1 original gene structure, not modified by PASA NODE_3837_length_2650_cov_32.1779 AUGUSTUS gene 1 1357 . - . ID=g1077;Name=g1077.t1 NODE_3837_length_2650_cov_32.1779 AUGUSTUS mRNA 1 1357 . - . ID=g1077.t1;Parent=g1077;Name=g1077.t1 NODE_3837_length_2650_cov_32.1779 AUGUSTUS exon 1 1357 . - . ID=g1077.t1.exon1;Parent=g1077.t1 NODE_3837_length_2650_cov_32.1779 AUGUSTUS CDS 1 1357 . - 0 ID=cds.g1077.t1;Parent=g1077.t1 #PROT g1077.t1 g1077 MSSVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSPLHTHLRHVRLFHLWPMYNRMYIEDAQFRDEVRATIPVDRLVLVSFDGDLHDLSAFKGVHSALFPIVGRTGSTCSASDLSPLKGVHTVELSIHSDSPDYLAPLADARAVCIREFHCSTRVPAFRKAKSVDIRNGWVDLNDLTGIPRVTLGGSYTEPGTRIQDVSPLRLALYVELRSQKELEDLSCLENAREVVIHDCPRIVTLPPATHLRSFTWHGSPLTAIPPELGRLRFLDLSGARYLEDVSAARNVHELILSQCSWLNDVSALGSVHTLRISSAGVLDVSALCGVHTLEFDCVRLTGVSKLTGIHYLSLFSVEFDVQELSQLGTVHTLSLPLVDVEDVSTLGGVHTLLLKRNERIVDVSALGNCHRVELIGCPVSDVSMLGRVHTLNLESTNVSDVSMLGNVHTLNLRSCKKV # PASA_UPDATE: g4866.t1, single gene model update, valid-1, status:[pasa:asmbl_2078,status:12],[pasa:asmbl_2080,status:12], valid-1 NODE_1597_length_10273_cov_38.412 . gene 5197 10013 . - . ID=g4866;Name=g4866.t1 NODE_1597_length_10273_cov_38.412 . mRNA 5197 10013 . - . ID=g4866.t1;Parent=g4866;Name=g4866.t1 NODE_1597_length_10273_cov_38.412 . five_prime_UTR 9999 10013 . - . ID=g4866.t1.utr5p1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 9897 10013 . - . ID=g4866.t1.exon1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 9897 9998 . - 0 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 8228 9548 . - . ID=g4866.t1.exon2;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 8228 9548 . - 0 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 7897 8072 . - . ID=g4866.t1.exon3;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 7897 8072 . - 2 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 7521 7749 . - . ID=g4866.t1.exon4;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 7521 7749 . - 0 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 7004 7115 . - . ID=g4866.t1.exon5;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 7004 7115 . - 2 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 6521 6704 . - . ID=g4866.t1.exon6;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 6521 6704 . - 1 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 6113 6295 . - . ID=g4866.t1.exon7;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 6113 6295 . - 0 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . exon 5197 5803 . - . ID=g4866.t1.exon8;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . CDS 5612 5803 . - 0 ID=cds.g4866.t1;Parent=g4866.t1 NODE_1597_length_10273_cov_38.412 . three_prime_UTR 5197 5611 . - . ID=g4866.t1.utr3p1;Parent=g4866.t1 #PROT g4866.t1 g4866 MSHAIPTSADAVVPIECASAATSPLATTYARHTLAVHDVCLSPDNDVIVSGGADGLVCFFDATLARSHGTHTHGPVVNSVLRSFTARDDGAPVFAVALLSGGADMVETFLDVTSPNSKPRMLPSLLAVGFLHNSEIRLFSCTHNFACLQTVSFSSPPSSINTPSNQLPWNHVSTEPSSRFLVLSSVNRRSSVIALMVGATNRPNSAENSLGFVGAVEFGVAQPLLSFVVPSTVINDDAEGGAVALGAGELWDQRITMQAYCMQEKAIQQLTLSFKPVPAAVVGSGEWNSISGAGASDIDVSANADIAAHTSLETAAAMLEGLPLPPSSSQSSSTATTPLIPSPTPIEAAFAPALSASVSAPLPTAHVAQASATPAEEPAREKSRETAASQKGQSAAHAPNTQRQQPSQPTRQPKGPTSGGAKGFGGAVHATPQQQTQTHIAATDSTSGHVDLASLEQRMNDRLEALARENAAHVARLEELQLRIFNKLEADLTSGSAHSLDTSQTLTAAADRIVAKVTESIGALKKDLPRAVQANNTAIDKAVKEAVASSLATPAGAAAIGAAVASSLQPVIADAFRRSVAESLVPAFERACQTMFTQVNATFERGMREFSDRAGPKGNAVTVTQLQELLASHSAQTQASIAQAVEKLEGNLSKSIVSAVQAEVSKSGKPAREGSEKGEKKRPDSKVQMWAEIQQNIKDKDYAPAFSKALGAMDLAIVVKLCQAVSAHEPNAIFGRKPPVLTQPIFLSLIQQLSVDFTKDTDLKLLFLQNALMEINTDDHVIKKHAPTVLAQLSSKLDQLITNVGDGSENSNLIQTARMIKFVVDSICRRIE* # PASA_UPDATE: g4865.t1, single gene model update, valid-1, status:[pasa:asmbl_2079,status:12], valid-1 NODE_1597_length_10273_cov_38.412 . gene 269 4111 . - . ID=g4865;Name=g4865.t1 NODE_1597_length_10273_cov_38.412 . mRNA 269 4111 . - . ID=g4865.t1;Parent=g4865;Name=g4865.t1 NODE_1597_length_10273_cov_38.412 . five_prime_UTR 3842 4111 . - . ID=g4865.t1.utr5p1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 3528 4111 . - . ID=g4865.t1.exon1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 3528 3841 . - 0 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 2708 3191 . - . ID=g4865.t1.exon2;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 2708 3191 . - 1 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 1966 2394 . - . ID=g4865.t1.exon3;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 1966 2394 . - 0 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 1222 1404 . - . ID=g4865.t1.exon4;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 1222 1404 . - 0 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 911 1017 . - . ID=g4865.t1.exon5;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 911 1017 . - 0 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 528 736 . - . ID=g4865.t1.exon6;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 528 736 . - 1 ID=cds.g4865.t1;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . exon 269 372 . - . ID=g4865.t1.exon7;Parent=g4865.t1 NODE_1597_length_10273_cov_38.412 . CDS 269 372 . - 2 ID=cds.g4865.t1;Parent=g4865.t1;3_prime_partial=true #PROT g4865.t1 g4865 MSQVAVNVDPAGGTPNQQLRASVTGLRRISSLVLGQPMPEDETFGITAEALGKIVSFDNRDKPQQLAVLRDAGDVEGIARSLKCNLDTGIPLPTAENNYAKRQEWYGRNVVPPPPPLSLLGLVLDAFKHDRIHQILVLGVAVTLTFGLIEDVQSGWTESVAIFVAILIVVGVTSGNDYHRDRKFKKILMLQSDKKVKVVRAGVQDQISSWDVQCGDLVELSMGDEVPADGIFVRGLNLTIDESPLTGETMPVKKRREAPFLFSGCQVSDGNGTYIVTGVGPLSSGGQIQKMLNEQQNQTTPLQEKLHVFAVQIGYVGLAAGVITFLGLTIRWIISISDETWKWSKLEDLSEFFVIGVTIVVVAVPEGLPLAVTISLAFSMYKMIRDQNFVRHLIASETMGEATCICSDKTGTLTENRMTVTECMIGGQVYKPDTFTADTFSTRKLLDLVAECAAINSTCFVKYKEKDPLPIFVGSSTEGALLVWAHKMGKPYEDIRRHVRKIEEATLAFSSDRKRMSSTCVPSDSLSPYRMYTKGASEIVLALCKHIIVKDGHTEVLGDETRKWILDHVQRMASDGLRTLVLAYRNFDDIPTVEQNPEEELTFIGLVGIK # ORIGINAL: g8656.t1 original gene structure, not modified by PASA NODE_1843_length_8959_cov_41.3704 AUGUSTUS gene 6822 8781 . - . ID=g8656;Name=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS mRNA 6822 8781 . - . ID=g8656.t1;Parent=g8656;Name=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS exon 8742 8781 . - . ID=g8656.t1.exon1;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS CDS 8742 8781 . - 0 ID=cds.g8656.t1;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS exon 8524 8578 . - . ID=g8656.t1.exon2;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS CDS 8524 8578 . - 2 ID=cds.g8656.t1;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS exon 7811 7968 . - . ID=g8656.t1.exon3;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS CDS 7811 7968 . - 1 ID=cds.g8656.t1;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS exon 7183 7409 . - . ID=g8656.t1.exon4;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS CDS 7183 7409 . - 2 ID=cds.g8656.t1;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS exon 6822 6947 . - . ID=g8656.t1.exon5;Parent=g8656.t1 NODE_1843_length_8959_cov_41.3704 AUGUSTUS CDS 6822 6947 . - 0 ID=cds.g8656.t1;Parent=g8656.t1 #PROT g8656.t1 g8656 MLSYTLPLPPNPLGPKTAQSIEDQTMKINEPKRLVIEVHNSTPKVPYGDCFHSQLRHCITFESAQSTRLRVHYEVRFTKSTFVKGMIKTKSVEGVKDNYKTYLGVLRKFVGLKEGADATPTTPTAAKATVFTEAAKAAPESSPGLPIALVALVVFLVLLLIAYLLLYIRLGRVEGELARIRDACAAHQSYGHSESDSLPST* # PASA_UPDATE: g8655.t1, single gene model update, valid-1, status:[pasa:asmbl_2780,status:3], valid-1 # PASA_UPDATE: g8655.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2782,status:3], valid-1 NODE_1843_length_8959_cov_41.3704 . gene 616 5676 . - . ID=g8655;Name=g8655.t1 NODE_1843_length_8959_cov_41.3704 . mRNA 616 5676 . - . ID=g8655.t1;Parent=g8655;Name=g8655.t1 NODE_1843_length_8959_cov_41.3704 . five_prime_UTR 5566 5676 . - . ID=g8655.t1.utr5p1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 5496 5676 . - . ID=g8655.t1.exon1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 5496 5565 . - 0 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 4899 5002 . - . ID=g8655.t1.exon2;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 4899 5002 . - 2 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 3809 4170 . - . ID=g8655.t1.exon3;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 3809 4170 . - 0 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 3498 3651 . - . ID=g8655.t1.exon4;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 3498 3651 . - 1 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 3045 3272 . - . ID=g8655.t1.exon5;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 3045 3272 . - 0 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 2462 2737 . - . ID=g8655.t1.exon6;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 2462 2737 . - 0 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 2065 2110 . - . ID=g8655.t1.exon7;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 2065 2110 . - 0 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 1725 1856 . - . ID=g8655.t1.exon8;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 1725 1856 . - 2 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . exon 616 1430 . - . ID=g8655.t1.exon9;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . CDS 730 1430 . - 2 ID=cds.g8655.t1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . three_prime_UTR 616 729 . - . ID=g8655.t1.utr3p1;Parent=g8655.t1 NODE_1843_length_8959_cov_41.3704 . mRNA 616 5676 . - . ID=g8655.t1.1.5b6be70a;Parent=g8655;Name=g8655.t1 NODE_1843_length_8959_cov_41.3704 . five_prime_UTR 4899 5676 . - . ID=g8655.t1.1.5b6be70a.utr5p1;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . five_prime_UTR 3847 4170 . - . ID=g8655.t1.1.5b6be70a.utr5p2;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 4899 5676 . - . ID=g8655.t1.1.5b6be70a.exon1;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 3809 4170 . - . ID=g8655.t1.1.5b6be70a.exon2;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 3809 3846 . - 0 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 3498 3651 . - . ID=g8655.t1.1.5b6be70a.exon3;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 3498 3651 . - 1 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 3045 3272 . - . ID=g8655.t1.1.5b6be70a.exon4;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 3045 3272 . - 0 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 2462 2737 . - . ID=g8655.t1.1.5b6be70a.exon5;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 2462 2737 . - 0 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 2065 2110 . - . ID=g8655.t1.1.5b6be70a.exon6;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 2065 2110 . - 0 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 1725 1856 . - . ID=g8655.t1.1.5b6be70a.exon7;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 1725 1856 . - 2 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . exon 616 1430 . - . ID=g8655.t1.1.5b6be70a.exon8;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . CDS 730 1430 . - 2 ID=cds.g8655.t1.1.5b6be70a;Parent=g8655.t1.1.5b6be70a NODE_1843_length_8959_cov_41.3704 . three_prime_UTR 616 729 . - . ID=g8655.t1.1.5b6be70a.utr3p1;Parent=g8655.t1.1.5b6be70a #PROT g8655.t1 g8655 MAFPPSFGSSDAFTADLLLDIGEGVSGYRSPHAQPQPISGLHSTTGGLQVLFADKSLQVYRLIAPNGRPVEAPDSVHAFLQVDHWKHPLTPGKSPVLRAKRRFYVFPEVETVEEDVWAASQSTAKAAADGASSGRLADWSVSAVNSAALRQAAEAVASHATSVILSMSVPDAEVDVFESLLIEYADMRATGESAADPLSQSGADDDWMVLDDAIDELVFETNGNATDHATQHESVTSAGRRAASSIYMTTTSVVTATSEFVRDAYTAYQIGDWASIGVDTEQLVLDTPAVTCYRVLEGNAVEPLHKGSMQLVDREYSAWIRMGEIIVPLGSIKRMEHVSARSVKLTTDSKQGTMLMVFGEASAKAMGEVQLDACTMFASALQSLAAVERPTLNDRLSKGMESMGDWMALKLARGSESAANAIQLGGKAVKDRMTPSERTYVASPQMETRLQSVRSFTEKATIASAALASGVQSAGAAVVRKVSVPLANLAAKHLSDGTTGGTVQVLGSGAKGIVVVYAGLEAAARRLASELSATFADVISHVYGEDAGRATGMALDSAGNISSAYMNISRVSVRGALTHGTAHAVAESAQVVGSSRNAVNHSTGNGTGGGFAGAPGCAESVLGVADESDRRPGEGQSACDGEGNLGTAASSAAAVQTQIPGALREGGVTAVTPAPSAPPMYDWTVFRDKQ* #PROT g8655.t1.1.5b6be70a g8655 MSVPDAEVDVFESLLIEYADMRATGESAADPLSQSGADDDWMVLDDAIDELVFETNGNATDHATQHESVTSAGRRAASSIYMTTTSVVTATSEFVRDAYTAYQIGDWASIGVDTEQLVLDTPAVTCYRVLEGNAVEPLHKGSMQLVDREYSAWIRMGEIIVPLGSIKRMEHVSARSVKLTTDSKQGTMLMVFGEASAKAMGEVQLDACTMFASALQSLAAVERPTLNDRLSKGMESMGDWMALKLARGSESAANAIQLGGKAVKDRMTPSERTYVASPQMETRLQSVRSFTEKATIASAALASGVQSAGAAVVRKVSVPLANLAAKHLSDGTTGGTVQVLGSGAKGIVVVYAGLEAAARRLASELSATFADVISHVYGEDAGRATGMALDSAGNISSAYMNISRVSVRGALTHGTAHAVAESAQVVGSSRNAVNHSTGNGTGGGFAGAPGCAESVLGVADESDRRPGEGQSACDGEGNLGTAASSAAAVQTQIPGALREGGVTAVTPAPSAPPMYDWTVFRDKQ* # ORIGINAL: g2773.t1 original gene structure, not modified by PASA NODE_14581_length_248_cov_57.1792_potentialcontaminant AUGUSTUS gene 39 228 . + . ID=g2773;Name=g2773.t1 NODE_14581_length_248_cov_57.1792_potentialcontaminant AUGUSTUS mRNA 39 228 . + . ID=g2773.t1;Parent=g2773;Name=g2773.t1 NODE_14581_length_248_cov_57.1792_potentialcontaminant AUGUSTUS exon 39 228 . + . ID=g2773.t1.exon1;Parent=g2773.t1 NODE_14581_length_248_cov_57.1792_potentialcontaminant AUGUSTUS CDS 39 228 . + 1 ID=cds.g2773.t1;Parent=g2773.t1 #PROT g2773.t1 g2773 APPLPANPDGLAVEGNAANAPAPLAPVVPPQPAPQAAAPVQMPLPADFAAAVLQVVGAPLQAV # PASA_UPDATE: g11037.t1, single gene model update, valid-1, status:[pasa:asmbl_2792,status:12], valid-1 NODE_1847_length_8939_cov_42.2907 . gene 2 6588 . + . ID=g11037;Name=g11037.t1 NODE_1847_length_8939_cov_42.2907 . mRNA 2 6588 . + . ID=g11037.t1;Parent=g11037;Name=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 2 160 . + . ID=g11037.t1.exon1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 2 160 . + 0 ID=cds.g11037.t1;Parent=g11037.t1;5_prime_partial=true NODE_1847_length_8939_cov_42.2907 . exon 374 487 . + . ID=g11037.t1.exon2;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 374 487 . + 0 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 737 844 . + . ID=g11037.t1.exon3;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 737 844 . + 0 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 1132 1835 . + . ID=g11037.t1.exon4;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 1132 1835 . + 0 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 2124 3646 . + . ID=g11037.t1.exon5;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 2124 3646 . + 1 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 3833 4260 . + . ID=g11037.t1.exon6;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 3833 4260 . + 2 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 4562 4728 . + . ID=g11037.t1.exon7;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 4562 4728 . + 0 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 5008 5142 . + . ID=g11037.t1.exon8;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 5008 5142 . + 1 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 5417 6237 . + . ID=g11037.t1.exon9;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 5417 6237 . + 1 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . exon 6405 6588 . + . ID=g11037.t1.exon10;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . CDS 6405 6445 . + 2 ID=cds.g11037.t1;Parent=g11037.t1 NODE_1847_length_8939_cov_42.2907 . three_prime_UTR 6446 6588 . + . ID=g11037.t1.utr3p1;Parent=g11037.t1 #PROT g11037.t1 g11037 AIYFNGKKIEVTISYSQFVENDALNSDYSDGGVAVIEGSAVVTYSGCLFQGNQGYYSGVTWARGFTRIVYDSCIFIENVGIIGGTAYIESSALLTVSQCNFIGNTASNGGTIYGGAQVVDSIFENNKARKSGAVAFVPSINSMLTMTNCIFRGNTAREAGGLVYVDSMGRLDYRPCVTVTGGSASSNTANIGGLFFVKSGLGEDREQTPLPPPSDDTPNLVVEDFSVSFSRATEGGIIAATAGGVAVFRRLTGSSNTASFGGVGHISDDSRILCTECVVQKSSASSGGAFYVTERGVLTLMSSHMERSFAIFFGGGISLLVEGSLVMSNSSGMGNGALYGGFLEMSLNSAAVITDSTITHNSASNSGGAISMTGETELTLENVSFISNCAERGGAIYVNDNAFVVGFGDVESDRPADDRYVAFFAGNRALEGGAMYLGRKSHVSLAYSRFEGNAAFRAGGAIVATGCSDMTLWKSSFHRNNAAGIANGGGIVFQDRTIALIVRVNFTENSARSGGALFGSVDISQSPCQALATGTKSENDNSIYCGDIDGISPRRRDIHQSRIRMRRDDVFDALVDLFDPETYELYPKAAVALLHCRLENNTALSEGGAIRVKDEAKAVIRSCVLEGNSVTESGRNGVGSAVFWDPILTSPSDAVRIVESDVTHNRGVYGTVYCENPVDGNLTRPFAVRLEDANVRDNVGDGAGMDVSTSPTSLDMFVSGEVDAAVNGTLDAVGGQSGVFIPTIRVRVKDAYDKTARPNDLIVQLELRVNSSAFTGNVYDLRVASNATLAGRTAIIADAYGVVVFAGLRVIGVPGQYSLVAFAPAVRVVTGDSLPVTIAECHLGYHLEPYAASDVSMSICDPDPVQSVQVNNQDGQVGTIVPAVVLPTVALSAFLGGLLWWRLRVAKREASRVTHQQFLVKHFQAADKSQRLTAIEFSHDSIDLLEPLGHGEFGAVHRAMLTTSERPRLCAAKSMRDGTTYRERVEFIAEAEVMLGLQHPNIVSLVGVVVQQEPMLILLEYAPYGNVKSFVQNIPNFRRGTANTMALLGNFAVQIALGMTYLASVKIVHRDLAARNVMVGQDVFGDYVVKVADFGLSRRFEQSYYRKKSKGGRLPYKWMSPESCDGVYSEKSDVWSWGVTVFEMYTFGASPYPGYSPDELQRFLKAGHRLDHPDGCPHTTYTLLLSCWAYDAANRPTFASICERLILSSQLKDTPSKATVLLGVDAAVLNPPADGVGGLPSIHVTVDSHESDAPTQAGRRQQDTLAHLDDEHFQLSAVRRIHRISNAYMPEFAVPPAMPPAATKRVLLGAPAAEYDAVGHVTADSDSAGYVDFSATAATNNASVLGASDEAMPRTTRTTADSEGSTASVEFNVHSTRVAAALPTELDIQFNAEVRTSDV* # ORIGINAL: g11038.t1 original gene structure, not modified by PASA NODE_1847_length_8939_cov_42.2907 AUGUSTUS gene 7412 8783 . + . ID=g11038;Name=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS mRNA 7412 8783 . + . ID=g11038.t1;Parent=g11038;Name=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS exon 7412 7736 . + . ID=g11038.t1.exon1;Parent=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS CDS 7412 7736 . + 0 ID=cds.g11038.t1;Parent=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS exon 8101 8283 . + . ID=g11038.t1.exon2;Parent=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS CDS 8101 8283 . + 2 ID=cds.g11038.t1;Parent=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS exon 8493 8783 . + . ID=g11038.t1.exon3;Parent=g11038.t1 NODE_1847_length_8939_cov_42.2907 AUGUSTUS CDS 8493 8783 . + 2 ID=cds.g11038.t1;Parent=g11038.t1 #PROT g11038.t1 g11038 MADNHIREDVEATWNPNEVIKPMGRVALDSLLADYDDENMDHADDELAVDELRRLVSSELHVIADDEGPQLDFESAHTRQEKVELLGRLLNMDRPAVTRPMTHFLLQDEVIELLVSFITRVDESNGDNPNRPRDYNDESVMRRAYNAMLVLCSRESIISEVVDKKISLIVVSLFQIFRPCSDGSFHHFKQLITRLLASNADDVLFEITRNPSKTVALALPLLHEPSVYLCFRELLVVQCGMAPRRRLFDVMRELDFLGHFARAIVD # PASA_UPDATE: g8809.t1, single gene model update, valid-1, status:[pasa:asmbl_5551,status:3], valid-1 NODE_3094_length_4333_cov_39.7731 . gene 1080 4176 . - . ID=g8809;Name=g8809.t1 NODE_3094_length_4333_cov_39.7731 . mRNA 1080 4176 . - . ID=g8809.t1;Parent=g8809;Name=g8809.t1 NODE_3094_length_4333_cov_39.7731 . five_prime_UTR 3998 4176 . - . ID=g8809.t1.utr5p1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . five_prime_UTR 3682 3754 . - . ID=g8809.t1.utr5p2;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 3998 4176 . - . ID=g8809.t1.exon1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 3629 3754 . - . ID=g8809.t1.exon2;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . CDS 3629 3681 . - 0 ID=cds.g8809.t1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 2906 3032 . - . ID=g8809.t1.exon3;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . CDS 2906 3032 . - 1 ID=cds.g8809.t1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 2350 2568 . - . ID=g8809.t1.exon4;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . CDS 2350 2568 . - 0 ID=cds.g8809.t1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 1926 2054 . - . ID=g8809.t1.exon5;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . CDS 1926 2054 . - 0 ID=cds.g8809.t1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . exon 1080 1671 . - . ID=g8809.t1.exon6;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . CDS 1582 1671 . - 0 ID=cds.g8809.t1;Parent=g8809.t1 NODE_3094_length_4333_cov_39.7731 . three_prime_UTR 1080 1581 . - . ID=g8809.t1.utr3p1;Parent=g8809.t1 #PROT g8809.t1 g8809 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPKTFETLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRMVSQKRALAWCQSKNNIPYFETSAKESINVEQAFQTIAKNALQQETEVELYNDFPDQIKLSSDDKPKQDGCGC* # ORIGINAL: g8808.t1 original gene structure, not modified by PASA NODE_3094_length_4333_cov_39.7731 AUGUSTUS gene 188 771 . + . ID=g8808;Name=g8808.t1 NODE_3094_length_4333_cov_39.7731 AUGUSTUS mRNA 188 771 . + . ID=g8808.t1;Parent=g8808;Name=g8808.t1 NODE_3094_length_4333_cov_39.7731 AUGUSTUS exon 188 771 . + . ID=g8808.t1.exon1;Parent=g8808.t1 NODE_3094_length_4333_cov_39.7731 AUGUSTUS CDS 188 771 . + 2 ID=cds.g8808.t1;Parent=g8808.t1 #PROT g8808.t1 g8808 RDVSPLGTAGSFTVSRILFNLAKPYRSSVPLVLGDVTSEFAHFFQQSDQTPTVADMTCLIDATTGHVTSCGGMIVQATPGTPASLIAEIAEYKNKEGSHSNPPTDDTSLFHKLSQSLTVSEDTRSAYRVRFECSCSREQCLDGVAALPELSELAEDAKRSPSGGLDVTCHYCKATHTLTAAELTERSVRHRGG* # ORIGINAL: g8984.t1 original gene structure, not modified by PASA NODE_2980_length_4612_cov_39.1252 AUGUSTUS gene 229 3285 . + . ID=g8984;Name=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS mRNA 229 3285 . + . ID=g8984.t1;Parent=g8984;Name=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 229 406 . + . ID=g8984.t1.exon1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 229 406 . + 1 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 627 749 . + . ID=g8984.t1.exon2;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 627 749 . + 0 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 967 1095 . + . ID=g8984.t1.exon3;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 967 1095 . + 0 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 1694 2097 . + . ID=g8984.t1.exon4;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 1694 2097 . + 0 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 2419 2572 . + . ID=g8984.t1.exon5;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 2419 2572 . + 1 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 2855 2995 . + . ID=g8984.t1.exon6;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 2855 2995 . + 0 ID=cds.g8984.t1;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 3196 3285 . + . ID=g8984.t1.exon7;Parent=g8984.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 3196 3285 . + 0 ID=cds.g8984.t1;Parent=g8984.t1 #PROT g8984.t1 g8984 TLAGSTIMLLTLPWFGALVIGRCDLNERGEAVDGRFTGFKPKQQGVTVLDEVPLAAKIMGADWYYGATKPGELEPPYVLRAALATFVLSLVGLCVFLYYQIRGGPAPEIATEKRKEHSRKAKMHAMSAALYVQYLMKERKRGPSSRNGGVRRSDSAIARHYGNTWRYAARLRREERERAAAAGTGIAAADLRVRIDEQRPLLSVQEEPNVRLQEEEEEEVLGEASTEAIEAGEHEAQPRWKIGMWSAAYLVVGVGLVTIFSDPMCDVLSALTDKRNKSYIPIPAFYMSFLVTPVCSNASEIISSLIFAAKKRKTNISMTYGQLYGAATMNNTLCLGIFTALVYWRKLYWNYAAETTVIVLAQFIVGGLAITKSTYKVWYGFPIAAIYFGSIGLVALLESSAVGWN* # ORIGINAL: g8985.t1 original gene structure, not modified by PASA NODE_2980_length_4612_cov_39.1252 AUGUSTUS gene 3962 4321 . - . ID=g8985;Name=g8985.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS mRNA 3962 4321 . - . ID=g8985.t1;Parent=g8985;Name=g8985.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 4197 4321 . - . ID=g8985.t1.exon1;Parent=g8985.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 4197 4321 . - 0 ID=cds.g8985.t1;Parent=g8985.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS exon 3962 4070 . - . ID=g8985.t1.exon2;Parent=g8985.t1 NODE_2980_length_4612_cov_39.1252 AUGUSTUS CDS 3962 4070 . - 1 ID=cds.g8985.t1;Parent=g8985.t1 #PROT g8985.t1 g8985 MPVPAYQSQGPSCLDRVKMGAMIGGTVGLCVGGLFGGFAALRYGLRGRELVNTVGKTMLQSGASFGFFMGIGSGIRC* # PASA_UPDATE: g2066.t1, single gene model update, valid-1, status:[pasa:asmbl_3099,status:12], valid-1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant . gene 7923 8342 . - . ID=g2066;Name=g2066.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant . mRNA 7923 8342 . - . ID=g2066.t1;Parent=g2066;Name=g2066.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant . exon 7923 8342 . - . ID=g2066.t1.exon1;Parent=g2066.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant . CDS 7923 8342 . - 0 ID=cds.g2066.t1;Parent=g2066.t1 #PROT g2066.t1 g2066 MSLRQHWISHLQDRDVYVCEFCDLRFHHHLTRLRHEYEMHTHRVWRRFVPELLDMPREWVPKEVADQMDIAEANGDISDGNNSDGLGDGDLNERGLNKRDLRDSGDSGDLGDSGDSGDSGDLGDSAESYPDSLYPTPKC* # ORIGINAL: g2064.t1 original gene structure, not modified by PASA NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS gene 5774 6478 . - . ID=g2064;Name=g2064.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS mRNA 5774 6478 . - . ID=g2064.t1;Parent=g2064;Name=g2064.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS exon 5774 6478 . - . ID=g2064.t1.exon1;Parent=g2064.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS CDS 5774 6478 . - 0 ID=cds.g2064.t1;Parent=g2064.t1 #PROT g2064.t1 g2064 MATSRNRAETSAPLGGGRLDLRSERAETSTQATSFEKRSNNGVDCSGKKLAVEDRLEFEQNVEDRQRELEREKLAPEDRQRQREFEREKLAIELEQEKLATENRQRQHQHQLELEKLVAEDRQGQLELEKLVAENRQRQRQFELEKLAAQNRQRQHQLELEKLAAEDRQRQHQHQLELEKLAAENRQRQRQHQLELEKLTAELELAKLAIHERLSIAKGITDFILTEKAMYKLV* # ORIGINAL: g2062.t1 original gene structure, not modified by PASA NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS gene 623 2262 . + . ID=g2062;Name=g2062.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS mRNA 623 2262 . + . ID=g2062.t1;Parent=g2062;Name=g2062.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS exon 623 875 . + . ID=g2062.t1.exon1;Parent=g2062.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS CDS 623 875 . + 0 ID=cds.g2062.t1;Parent=g2062.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS exon 1856 2262 . + . ID=g2062.t1.exon2;Parent=g2062.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS CDS 1856 2262 . + 2 ID=cds.g2062.t1;Parent=g2062.t1 #PROT g2062.t1 g2062 MSATGAGQDGVTADSWLSNSTKSCLSFEITTFSPRGARVRASNSPRGARSGALRYTLQTRPVVRSGTRSGARRYALQTRPVVRGVVVYYNAAAVLDNNRAALDDLMNALVKLDDSCRENAQIVGKEKNHKKKNVELAMSLDEMKAACKETRDALANIKVTAGTMKVALEVLKVALGDLEAGFREMRERIAEMESALVTSKRQATNLLGKRRGVSILSGG* # ORIGINAL: g2065.t1 original gene structure, not modified by PASA NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS gene 6770 7048 . + . ID=g2065;Name=g2065.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS mRNA 6770 7048 . + . ID=g2065.t1;Parent=g2065;Name=g2065.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS exon 6770 7048 . + . ID=g2065.t1.exon1;Parent=g2065.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS CDS 6770 7048 . + 0 ID=cds.g2065.t1;Parent=g2065.t1 #PROT g2065.t1 g2065 MSNKRTHRSGGDGRGHQCDEVMKLKSELRDAEDKIRDEADKLRDEADKLRDAEDKLRKIELEEVARQQTITRVVNEIANGTFNLELEISKIV* # ORIGINAL: g2063.t1 original gene structure, not modified by PASA NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS gene 4430 5650 . - . ID=g2063;Name=g2063.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS mRNA 4430 5650 . - . ID=g2063.t1;Parent=g2063;Name=g2063.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS exon 4430 5650 . - . ID=g2063.t1.exon1;Parent=g2063.t1 NODE_1952_length_8370_cov_23.8482_potentialcontaminant AUGUSTUS CDS 4430 5650 . - 0 ID=cds.g2063.t1;Parent=g2063.t1 #PROT g2063.t1 g2063 MDSIAQSSRRFFDGHLCPGFLAPREYKRGPDIIIHTGNLIRTSKRGKKHPSTTSIVVIGNVKLAFTTKDIYQLYRYARTLYLADPSRKSILTFLVSHTSVQSYQFEWSEEGRLLEVVKHRVYNCSSSTDEGARLLYGLFTSKSIHYPGYLDRIPSNYVIHKRLGRGAFGTVFELKGKRTNAVLKVFESDEAHSDELSALRKLANGPKCDARNSFVKLVDSSIPMCLIMQPMGVQNGLSSSAATQLVDAVEYLHTKVRLVHRDIRPLNLVRYLNRIVIIDLGSAIKLGTYAFYAGTLSTASNRVLTLLAEGEVSLKAVAKDDHESLIKTLLLIWQPIALPKLGRLSRTDKAAALIEFWSNIDKVLPIEIATAFRAACVNINSTNDAFATFVNHAFCGERSLGPWTNK* # ORIGINAL: g3116.t1 original gene structure, not modified by PASA NODE_4568_length_1451_cov_44.5647_potentialcontaminant AUGUSTUS gene 381 1208 . - . ID=g3116;Name=g3116.t1 NODE_4568_length_1451_cov_44.5647_potentialcontaminant AUGUSTUS mRNA 381 1208 . - . ID=g3116.t1;Parent=g3116;Name=g3116.t1 NODE_4568_length_1451_cov_44.5647_potentialcontaminant AUGUSTUS exon 381 1208 . - . ID=g3116.t1.exon1;Parent=g3116.t1 NODE_4568_length_1451_cov_44.5647_potentialcontaminant AUGUSTUS CDS 381 1208 . - 0 ID=cds.g3116.t1;Parent=g3116.t1 #PROT g3116.t1 g3116 MPPKSAPSKSPKKTPKSPASAKTKKAPKSPASGKTSGKNKVKKAVDEDTSRLFQLTNPTAVGGMSKTFDANHINIVTAPSAKDAANMFYKRIENTMINGSPNNRKFYFSFRELNGADDAKGERKESDNSYSYMGMVSADKKSGEKKFTIKKMSQKKVTKGRIPREKLANMIADNVRQTGGKHVPAAEQEGGNYYLATAPTVGTVGVVDENFLLSGFNWLYLADLYYTIDEPYFWDIWYGLYPMPLAVPYYQNAIITQPYSGTSVVVIDGGLLQLA* # ORIGINAL: g4156.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 7761 10773 . + . ID=g4156;Name=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 7761 10773 . + . ID=g4156.t1;Parent=g4156;Name=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 7761 7926 . + . ID=g4156.t1.exon1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 7761 7926 . + 0 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 8037 8149 . + . ID=g4156.t1.exon2;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 8037 8149 . + 2 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 8293 8526 . + . ID=g4156.t1.exon3;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 8293 8526 . + 0 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 8722 8791 . + . ID=g4156.t1.exon4;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 8722 8791 . + 0 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 9000 9114 . + . ID=g4156.t1.exon5;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 9000 9114 . + 2 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 9379 9420 . + . ID=g4156.t1.exon6;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 9379 9420 . + 1 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 9698 9858 . + . ID=g4156.t1.exon7;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 9698 9858 . + 1 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 9976 10426 . + . ID=g4156.t1.exon8;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 9976 10426 . + 2 ID=cds.g4156.t1;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 10611 10773 . + . ID=g4156.t1.exon9;Parent=g4156.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 10611 10773 . + 1 ID=cds.g4156.t1;Parent=g4156.t1 #PROT g4156.t1 g4156 MSTPLAQPFSVARMPPPERRGYAVPKEIEDYLGFVSTVKSKLSMHKLIYNGIIAGVFVTFGGFLSTVAAGGLLGTFRSEYPAVPKLLAGAVFPLALILILLYGGELFTGNTMYFVMGRMQKRISFKDLALNWAVVYLSNFLGCAVSAYLFGYQTLFFAAEPYHSYVTKAAETKCSYGFWVILLRSIPANWLVCLAVTLSVAAQDVGGKMFAMWFPIFGFATVGFEHVIANMYTIPLGMYYGANVTIGELIVKNLIPATIGNIIGGGIMCGASLVYLHRFFPPPPTLPVTATDALAVEMHADCRNAILLAVHNNHADGHVSVAHGKDSAEGVEMHTDHASGNAMAHHDPPSYRHAVFTAANEYLVTYVKRYVTKSGECILVSVTSYLSSNKPAGVTLPDDGAGASSTAAGADMGPPVQLVAYIQRVGDFGDGSRQDGRAPIGVLIVDLVGARTIEEGRIQFADEAICGMLGYSREELCKLTVGTITHPADADVSSRSMGSKFSPR* # PASA_UPDATE: g4158.t1, single gene model update, valid-1, status:[pasa:asmbl_191,status:3], valid-1 NODE_104_length_39705_cov_42.2637 . gene 13965 20792 . + . ID=g4158;Name=g4158.t1 NODE_104_length_39705_cov_42.2637 . mRNA 13965 20792 . + . ID=g4158.t1;Parent=g4158;Name=g4158.t1 NODE_104_length_39705_cov_42.2637 . five_prime_UTR 13965 14002 . + . ID=g4158.t1.utr5p1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 13965 14140 . + . ID=g4158.t1.exon1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 14003 14140 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 14541 14992 . + . ID=g4158.t1.exon2;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 14541 14992 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 15365 15452 . + . ID=g4158.t1.exon3;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 15365 15452 . + 1 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 15802 15901 . + . ID=g4158.t1.exon4;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 15802 15901 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 16146 16259 . + . ID=g4158.t1.exon5;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 16146 16259 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 16440 16569 . + . ID=g4158.t1.exon6;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 16440 16569 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 16786 16964 . + . ID=g4158.t1.exon7;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 16786 16964 . + 1 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 17109 17230 . + . ID=g4158.t1.exon8;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 17109 17230 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 17531 17696 . + . ID=g4158.t1.exon9;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 17531 17696 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 17857 17967 . + . ID=g4158.t1.exon10;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 17857 17967 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 18227 18315 . + . ID=g4158.t1.exon11;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 18227 18315 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 18559 18610 . + . ID=g4158.t1.exon12;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 18559 18610 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 18743 18838 . + . ID=g4158.t1.exon13;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 18743 18838 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 19025 19109 . + . ID=g4158.t1.exon14;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 19025 19109 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 19277 19376 . + . ID=g4158.t1.exon15;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 19277 19376 . + 1 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 19525 19677 . + . ID=g4158.t1.exon16;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 19525 19677 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 19806 19906 . + . ID=g4158.t1.exon17;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 19806 19906 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 20182 20263 . + . ID=g4158.t1.exon18;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 20182 20263 . + 1 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 20424 20502 . + . ID=g4158.t1.exon19;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 20424 20502 . + 0 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . exon 20615 20792 . + . ID=g4158.t1.exon20;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . CDS 20615 20730 . + 2 ID=cds.g4158.t1;Parent=g4158.t1 NODE_104_length_39705_cov_42.2637 . three_prime_UTR 20731 20792 . + . ID=g4158.t1.utr3p1;Parent=g4158.t1 #PROT g4158.t1 g4158 MSLFSAREYWSTTIGVGEDFDIGSLCVGCVDNNVATGDKIVVGSFQGILRIYRPADKAYKPDDLLAEIALNDPIIQLGVGRFVPNSTDNALAVLHPRRLAVYVVGRDGDNQVELRMVYEHILGRSAANMAWGPFGGSKGKDCVCVQSLDGVLSFFDRESFQFACCLPGALIPGPLCYVARTDSFVTWSAARHIQSYRFSSIAASSRDEDNTTSHTSQNVTSGKLLQPDWSLNVGEDVVDIVVARFSVAQTASQLDLIVLGERNLFCLKPTGSVRTSRRLDYNPSCMVAYPVGVTETFVDGVKDNLIVASQTASLMIYSEMRLVWAAKAVSVPVALAIGTFCGIAGFIVSLDDTGHLTCLFLGTDPSTATVPLPELREPNYAAIESELGRLQTIIRDHAGYGIAKTQPTNPTSPKSRPSSRVEREEELLVQPIVPYRLDDPTPSDDGDSFSTDPADCVTAQIALRYTGQGSVADARVSVQVVQPVKTPTPFVVVPILESRSSSPTVLSITFSCDQRLLPSSTEVFVAVTYTSTDGEPRCIRTSFRLPLPLFCSSSPPSKDAAHKLTLETNRPPVQLLELFDDMHSREMGISANAVGFKFNSGPEVSVVTSKNAGRYRLQSDAFEALWLVVAELMARLSSYFGSQAGKPGLERFAITYAEALPLASFFPLVDEHLSLRHNLAQIRAIVAERASEYRGVQKRLLARYKDKTPAALQGLDVLLADAYKTIMDAADSEIECKRKLASLGNRLSCGTRLILALVRIQCNLDDAQFQILESALSPFVSDVCQQGWEERTDAAVSLLLQTCLARTPKERKVGHLELQMPTDASKLKKHILLLCERLAKGARLQIADIA* # PASA_UPDATE: g4162.t1, single gene model update, valid-1, status:[pasa:asmbl_187,status:12], valid-1 NODE_104_length_39705_cov_42.2637 . gene 30621 32075 . - . ID=g4162;Name=g4162.t1 NODE_104_length_39705_cov_42.2637 . mRNA 30621 32075 . - . ID=g4162.t1;Parent=g4162;Name=g4162.t1 NODE_104_length_39705_cov_42.2637 . exon 31958 32075 . - . ID=g4162.t1.exon1;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . CDS 31958 32075 . - 0 ID=cds.g4162.t1;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . exon 31190 31548 . - . ID=g4162.t1.exon2;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . CDS 31190 31548 . - 2 ID=cds.g4162.t1;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . exon 30621 31072 . - . ID=g4162.t1.exon3;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . CDS 30908 31072 . - 0 ID=cds.g4162.t1;Parent=g4162.t1 NODE_104_length_39705_cov_42.2637 . three_prime_UTR 30621 30907 . - . ID=g4162.t1.utr3p1;Parent=g4162.t1 #PROT g4162.t1 g4162 MWANAAGVALSGNAILAGTVVNDADLADACRDMALCALFGGAIPPRFRNGPNNNNHNDGPNNNNNNNNDNNNVNDILAALARLERRFDAVDRRFDAVDRRFDAVDLRFDAMDLRFDQVDNRLDAISSALEANNKARRACQLNANLPANAGVNFQPVPLTSLTPGNMPNGLMQRSEERRRCMLGLDRTGLLEMGTFRNILDARITKSSLGRESS* # ORIGINAL: g4159.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 22020 26177 . - . ID=g4159;Name=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 22020 26177 . - . ID=g4159.t1;Parent=g4159;Name=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 26175 26177 . - . ID=g4159.t1.exon1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 26175 26177 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 25827 26048 . - . ID=g4159.t1.exon2;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 25827 26048 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 25563 25670 . - . ID=g4159.t1.exon3;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 25563 25670 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 25075 25192 . - . ID=g4159.t1.exon4;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 25075 25192 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 24507 24853 . - . ID=g4159.t1.exon5;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 24507 24853 . - 2 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 24103 24188 . - . ID=g4159.t1.exon6;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 24103 24188 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 23503 23710 . - . ID=g4159.t1.exon7;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 23503 23710 . - 1 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 23181 23309 . - . ID=g4159.t1.exon8;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 23181 23309 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 22376 22971 . - . ID=g4159.t1.exon9;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 22376 22971 . - 0 ID=cds.g4159.t1;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 22020 22185 . - . ID=g4159.t1.exon10;Parent=g4159.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 22020 22185 . - 1 ID=cds.g4159.t1;Parent=g4159.t1 #PROT g4159.t1 g4159 MVRMVLLLLVGMCAATTVTSTSALHTEATSHSQESPTTAFGPFSPASWPPGELEKYAAANDVYNVPKTADGPLGKGVVSGTSSALAVHVASDVLRKGGNAVDAALAGSLAQVTIAAGAYVSFAGILSLLHFDASTGKTSNLNGCYNTVINERDARSIPKRGLEPKGRQVLVPGFMAGVEEALHTAGSGRFSLADIIGPALYFAEVGFPLSRLVAGNLVKNKALVTASDEGRRLFEKAPGVLYAAGDVFRQPELAQLLRNVSASGSKYMYTGDWGKRFVSAVAGRGGALTMDDMSKYRPVWTDAVATTVTLGADGVPATVYGPGEPGWGGVQFAETMNILEQMSGVVSPSTPHDKDGDALFWVVQALRWSQFVQMINATVPSIMALAFPELVNINSDVTRTSPALAAKVWALMSATNGTEDIKARLKKYYFRGNGVSMRNVAGDDTQQHGVGKHSDGFLVVDSNGDACSLVHSINTQPWGTGIFVDGVALPDSAAIQQWAVNHTLPGGRLSDPTGPAIVTTASSGGVASGAAADVPSRVLALTSAVGGGLLEVAVQGVLAMLRYGRTAGEAGTTGKVQAIEYSGSVYPTNQSVEVGQFQEAILQRVRLLGQSIHEHTNTAGDSTGDKGYWVGVRAPNDASKGTWSAFAASELNGLAEVVAD* # ORIGINAL: g4163.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 34429 34810 . + . ID=g4163;Name=g4163.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 34429 34810 . + . ID=g4163.t1;Parent=g4163;Name=g4163.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 34429 34459 . + . ID=g4163.t1.exon1;Parent=g4163.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 34429 34459 . + 0 ID=cds.g4163.t1;Parent=g4163.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 34575 34810 . + . ID=g4163.t1.exon2;Parent=g4163.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 34575 34810 . + 2 ID=cds.g4163.t1;Parent=g4163.t1 #PROT g4163.t1 g4163 MGPASELQHPGSGEGRDVNGWWACGDVESLADDATGAGDARRTGAVGEDTGSDEDDDEFVEETEEKEREEKICFSTGGPPQEAVGIDT* # ORIGINAL: g4161.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 28703 30555 . + . ID=g4161;Name=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 28703 30555 . + . ID=g4161.t1;Parent=g4161;Name=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 28703 28818 . + . ID=g4161.t1.exon1;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 28703 28818 . + 0 ID=cds.g4161.t1;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 29020 29224 . + . ID=g4161.t1.exon2;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 29020 29224 . + 1 ID=cds.g4161.t1;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 29453 29568 . + . ID=g4161.t1.exon3;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 29453 29568 . + 0 ID=cds.g4161.t1;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 29762 29957 . + . ID=g4161.t1.exon4;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 29762 29957 . + 1 ID=cds.g4161.t1;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 30286 30555 . + . ID=g4161.t1.exon5;Parent=g4161.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 30286 30555 . + 0 ID=cds.g4161.t1;Parent=g4161.t1 #PROT g4161.t1 g4161 MQALTAIRSLHPDAIVEIIEIDVSSPSSVLMAASEFRQRFGRLDLLFLNAGIMPVARVRWESLWPPTPSRLADVLPRGKELFMADDPVGANGMRTIFATNVFGHYQLVRELEPVLGRTQDARIIFTSSNAASPEDFSVTDIQHAKGRNPYGSSKHAIDLICWALNDRYARPSNPGAGTRVYAACPGLVVTRITSSFLPHWFWTIFLPVIIVLRFFFPTLSVTPYNGAEALVHLALTYNPTPEVTCKYYSNCTSVGRLFATQRRMYLNAAHARLLCKQLDELAELFRGRFLGEPRDAPQDS* # ORIGINAL: g4160.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 27458 27814 . - . ID=g4160;Name=g4160.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 27458 27814 . - . ID=g4160.t1;Parent=g4160;Name=g4160.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 27458 27814 . - . ID=g4160.t1.exon1;Parent=g4160.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 27458 27814 . - 0 ID=cds.g4160.t1;Parent=g4160.t1 #PROT g4160.t1 g4160 MSAPDATDIARQPDDSAGAGVEVWLRTRAEWLAKRASNSPAIDGAASAGTEDSDAHGGLVDAAMSERQRRLIHSPVHYDAIYNELNLGNPTGTLPQSVPLADIVGILVEQWEAKGMFV* # ORIGINAL: g4157.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 11587 13543 . - . ID=g4157;Name=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 11587 13543 . - . ID=g4157.t1;Parent=g4157;Name=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 12944 13543 . - . ID=g4157.t1.exon1;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 12944 13543 . - 0 ID=cds.g4157.t1;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 12350 12673 . - . ID=g4157.t1.exon2;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 12350 12673 . - 0 ID=cds.g4157.t1;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 11921 12061 . - . ID=g4157.t1.exon3;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 11921 12061 . - 0 ID=cds.g4157.t1;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 11587 11769 . - . ID=g4157.t1.exon4;Parent=g4157.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 11587 11769 . - 0 ID=cds.g4157.t1;Parent=g4157.t1 #PROT g4157.t1 g4157 MGPREASVPAMDVSPVARPIMPLSNSNPGMLPPPVFDPNAVYYDESGEQVSFEQYCAAYERQQDEIKRSQSLAATHGKSSAGLNTLHESRGEESDADSNFSPRTKASGLNLNKSSSGGGGGGDDDYETVESLVEEIERLKLENMRLTDANEDLTVQLSTQTSLKALDLLAVVNDTLAETNSEPQRQYQEWLKVAQHRALRIKNGGGAAGGIPASNSGPGSGGGSTGKSPRGNGRNPRDIAEISRLKIELDTRDKQLNKTRKHLDLARRENSALQKKLDDYGNAGQLTSMENEIVALKKTIKGYEHELQVMRNIQHQQENALLQRERRMASNTSADKPPKEDYYIPARGPLRLSTQTRRPMLPMGPMKPSQMGTLPSISHAAARAAAEAAGSSHIPYVKTGLHGDHVVPDGASGPW* # PASA_UPDATE: g4164.t1, single gene model update, valid-1, status:[pasa:asmbl_190,status:12], valid-1 NODE_104_length_39705_cov_42.2637 . gene 35522 39705 . + . ID=g4164;Name=g4164.t1 NODE_104_length_39705_cov_42.2637 . mRNA 35522 39705 . + . ID=g4164.t1;Parent=g4164;Name=g4164.t1 NODE_104_length_39705_cov_42.2637 . exon 35522 39705 . + . ID=g4164.t1.exon1;Parent=g4164.t1 NODE_104_length_39705_cov_42.2637 . CDS 35522 39705 . + 0 ID=cds.g4164.t1;Parent=g4164.t1;3_prime_partial=true #PROT g4164.t1 g4164 MADPGGRATAGDRVPSLTLKRPRTLAIVYGGTSANRDDTQRQAKRPKHTLGSPEPTSKGRTHRRIQRKRQFESEDSSDDSHINATEDSKEKPVPGAIHRMPGHSDATSADMDVAPNKRRHIEQQSATEEVSQPSSVLPRSNANSEDESADSLFFRRVWERLWSTLTDSKSATAMQSGEGTNIASQDRALEGNVLFLLTSESPLRGVSLSDDDVRWFASKVALGGNLVFALARLDDEGIMPKTHFIVEFARGNSESKKDFEEFDRIPTKSLKSRIIRDSTRELRNQSANGGARVIIPPGDLPTVVGILADDTFGAKLFAAAVELGVQYVTCASADIDVPADEGELDESNTDSDDHDEPPPVSDALKDVVLEAQAERPVGLSHLPEALSKPRSDKIFPLQQCLGDVLFERIAHILAAKDTPLASFERFVFRVMTARFTTLETQTADRLRDIEDIFDTDDWRESHVKRVERGDGAKTAAPVGSGVDRMVYNKDIEQRMHNFYAQLIDDPSTLGLLIVDECHYGATANQAYDVFANLASPTNPKDFKWSVNMVDDLRALCTKRGMAGLTSCHQIGNLVVLLVSATPYNQLSKSSRIPVCHLVSSSNGTECLKAEDDITGGDCIIVRDAHVVDWSEGQLRMGESFRLLVAPSAMQSDDWAYLRADTLEGRLSFSPVSPSGLFTQAMDAVIDLPASESAHATFSFNSATKSLSVSTVQGDGTSKEAFLSVDGKTVVLVNSPDRASAFELDRRVAYDVVRIKIAGHDVWISYNKHTRSLCVDKKQSGLCTEFLVCPSNTRAPYYRSVNYYINSMRSHATGNALVRGDAFLSDLCRESAEKQRGKGGNPPKNALTRDDALSCDYVYSIVRFALFFECCLTDDVAGTPRARPEERLAELLGNSEEWWRDCGKRVQRVLEEIEKNTKLPLRKYCQKYAETLKADSNPWAYLLHAPALLHSDDENLDDTWLEARNALCEAAGVDLDRLFHSSRTETDLIVSNLISERVQRVDDKRYMKGCMKIVRASSVKDGNRLYDSVCLAIMKTGMGKVFAVLREFDKWSLKTSFEKVIGAPTSDYERRCAEAKRHWRQLLQPPHRKCKECDCNHPRMEPESWDCLSCKHLHKPITQYEDLEDLPCILILVDRGGMGDTFPRTFDCMDLRTSYTTSVGELSTVVQELGRMCRYAAPGGKVPYALVGDALVRLLNQGLPSHFAVRSMFASHDRYLTSAQTHPDYPWRYTCGPPPPSKQTKKTIEKEGKAKKESGVHLDQPDRALVHHDARLILQAEPQVGKTGTYLALIQRIRRLIDQPDVRWPGDITVDDTFNEKMWAYPCYKDIDGDREMEKYTPGESKYDQMGARPYTRGFMFTREELDERSMRASQARGKREDQPASESDKERGLVNGLP # ORIGINAL: g4154.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 2108 3244 . - . ID=g4154;Name=g4154.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 2108 3244 . - . ID=g4154.t1;Parent=g4154;Name=g4154.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 2108 3244 . - . ID=g4154.t1.exon1;Parent=g4154.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 2108 3244 . - 0 ID=cds.g4154.t1;Parent=g4154.t1 #PROT g4154.t1 g4154 MLEQLSHIAAILASFAAVAAPPAAVVAGLVPRIGPGRAVGLGLYSRLFLRAKHESQRSEELGKVRKTLSTLREDQYLIVMGQKGVGKTCLVQTATQATCGVVNVRVQPGTSRKEIMADVFLAISRGFFRNALDYGPSARRVLWWHRLMFRRPATVVLQADERKPTQPFADLDSAARSLSGDYGMRVIIDASNNSLPESAKATLREVSMDIGPMPRPILEQLPELEALHAALKAADLADVVWACIGGVPASYFSLDQKWEDDGRKNVRHTAAGHIQKMLGTAILNKDGYVAANERLEQLCDRFRKDSELPASVLGDMKLVRLSPDKVLRVVWRPSPVGDESGENFLIPADSAMALVLRFGLRKPPTIDELKALVRGANA* # ORIGINAL: g4155.t1 original gene structure, not modified by PASA NODE_104_length_39705_cov_42.2637 AUGUSTUS gene 3542 6760 . + . ID=g4155;Name=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS mRNA 3542 6760 . + . ID=g4155.t1;Parent=g4155;Name=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 3542 3626 . + . ID=g4155.t1.exon1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 3542 3626 . + 0 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 3817 3898 . + . ID=g4155.t1.exon2;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 3817 3898 . + 2 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 4006 4261 . + . ID=g4155.t1.exon3;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 4006 4261 . + 1 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 4370 4618 . + . ID=g4155.t1.exon4;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 4370 4618 . + 0 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 4787 4957 . + . ID=g4155.t1.exon5;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 4787 4957 . + 0 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 5098 5958 . + . ID=g4155.t1.exon6;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 5098 5958 . + 0 ID=cds.g4155.t1;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS exon 6344 6760 . + . ID=g4155.t1.exon7;Parent=g4155.t1 NODE_104_length_39705_cov_42.2637 AUGUSTUS CDS 6344 6760 . + 0 ID=cds.g4155.t1;Parent=g4155.t1 #PROT g4155.t1 g4155 MSVFSWGSSKAGALGGGDLVERLVPRVVDAGIQGKHIIQVACGEQHSVALDDLGHVYCWGRQREGQTGHGVATALPLPVPEQVKALSHEFITQVTCGVHHTLAVTEGGRLYHWGISHAKMTDALPAYYGVGAAPQTDRVKEMIDRSHYQYFANVVLDDSSAMDASTDTETVGAFRRILLTTPTPVAVPEDDDHVIHVAAGYCFTVFVTARGAVYAYGFGDKGQLGQNNRFMSAAPVRLTFPTEEGAAQPSFIRVAAGQQHALALTSDGRVYAWGGGVFGAIGLGREIDQLAPERIRALEAAHIKAIACGSYHSVFVGSDGALYSCGHSEYGQQGVGDEGSSGAAHEHNFLVPRHCRHMLVPVREVTCGQLHTVAVAESGVVYAFGWGGSGALGLGDLKYRVRPTAVAQLEGVNIVSVAAGWKHTLALAPGEATTFALDFGRICHPMAREAHVPDMVFVAEGKPIMAHRAVVCARSPMFRSRIAFSERFCDGGVALLAGMSLVKRRVPSSRHGLVAVDIPLRFGVAVAYVQYLYTDHVRAAPYFMGELFKFAGALGDSRLYWLTRRSESVGSSEFGAHRAILMARCEFFRTWFDGSVAYVDRSLPVIDLGAALVEGAQGSADDIEAAFRTLIEFVYTGDRALVVPENALDVLICADYFLVGDLKRLCEAALVLIVDDENVTDLFGYSQRHDAPRLAERCRRLMSSRA* # PASA_UPDATE: g5937.t1, single gene model update, valid-1, status:[pasa:asmbl_1950,status:12], valid-1 NODE_1554_length_10503_cov_38.6718 . gene 212 947 . + . ID=g5937;Name=g5937.t1 NODE_1554_length_10503_cov_38.6718 . mRNA 212 947 . + . ID=g5937.t1;Parent=g5937;Name=g5937.t1 NODE_1554_length_10503_cov_38.6718 . five_prime_UTR 212 213 . + . ID=g5937.t1.utr5p1;Parent=g5937.t1 NODE_1554_length_10503_cov_38.6718 . exon 212 342 . + . ID=g5937.t1.exon1;Parent=g5937.t1 NODE_1554_length_10503_cov_38.6718 . CDS 214 342 . + 0 ID=cds.g5937.t1;Parent=g5937.t1;5_prime_partial=true NODE_1554_length_10503_cov_38.6718 . exon 554 947 . + . ID=g5937.t1.exon2;Parent=g5937.t1 NODE_1554_length_10503_cov_38.6718 . CDS 554 694 . + 0 ID=cds.g5937.t1;Parent=g5937.t1 NODE_1554_length_10503_cov_38.6718 . three_prime_UTR 695 947 . + . ID=g5937.t1.utr3p1;Parent=g5937.t1 #PROT g5937.t1 g5937 LRSGPLAVKKEPSDVYAFGVVLFEIVTRSLAYPNMNAMQIGMKVVLEDLRPSFPCPVAAHYEQLIEVCWQSDPSKRPTFKQIIPILEKL* # ORIGINAL: g5940.t1 original gene structure, not modified by PASA NODE_1554_length_10503_cov_38.6718 AUGUSTUS gene 9069 10205 . + . ID=g5940;Name=g5940.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS mRNA 9069 10205 . + . ID=g5940.t1;Parent=g5940;Name=g5940.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 9069 10205 . + . ID=g5940.t1.exon1;Parent=g5940.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 9069 10205 . + 0 ID=cds.g5940.t1;Parent=g5940.t1 #PROT g5940.t1 g5940 MAAIEAHQPPAVWSLTQLFDLVGADGLAHQHTVYSNNADARRFAWFGDRLLSGILAEMLHERMLHERMLNVSNVGTLSLTMARYSCNSTMATFMRYGTDAMQRISNPELSDHTIGTVFEAMLAGCFFLRGRIRCHTAVTNYCAWIDANQNLFNFPTNVVAASVEFLEFGGSRVAENVVGSCVLSNGHSIEHALQFLHAGPPVAQRSLTPAGAVVQKRPAAQQQQQQQQPEQQQQLRIGHSKPEVYVSWRSLSGLTWEDPYMPCCGVRGGRLTCLRCFWDDPTASHPGELRIIHLGNKVGGGKPQFGRNHIPRGRSPTWSCCGRSALAPGCKSTVFTAEAEYTLLVIAWLRAYDEFVKLEGDVLTGTDGVNGPRRAANQ* # PASA_UPDATE: g5939.t1, single gene model update, valid-1, status:[pasa:asmbl_1951,status:12], valid-1 NODE_1554_length_10503_cov_38.6718 . gene 6092 7750 . + . ID=g5939;Name=g5939.t1 NODE_1554_length_10503_cov_38.6718 . mRNA 6092 7750 . + . ID=g5939.t1;Parent=g5939;Name=g5939.t1 NODE_1554_length_10503_cov_38.6718 . exon 6092 6136 . + . ID=g5939.t1.exon1;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . CDS 6092 6136 . + 0 ID=cds.g5939.t1;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . exon 6654 6740 . + . ID=g5939.t1.exon2;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . CDS 6654 6740 . + 0 ID=cds.g5939.t1;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . exon 7019 7131 . + . ID=g5939.t1.exon3;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . CDS 7019 7131 . + 0 ID=cds.g5939.t1;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . exon 7339 7750 . + . ID=g5939.t1.exon4;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . CDS 7339 7483 . + 1 ID=cds.g5939.t1;Parent=g5939.t1 NODE_1554_length_10503_cov_38.6718 . three_prime_UTR 7484 7750 . + . ID=g5939.t1.utr3p1;Parent=g5939.t1 #PROT g5939.t1 g5939 MWVMEGCGQGMTKCWNGYNVGVRYRPKDCDVRSGKGDRLSVHYTGTLEDGTQFDSSIPRGQPFEFALGAGQVIKGWDMGLLDACVGEKRVLRIPPHLGYGDRGAPPKIPPGANLRFEVEVVNIKKKDEL* # ORIGINAL: g5938.t1 original gene structure, not modified by PASA NODE_1554_length_10503_cov_38.6718 AUGUSTUS gene 1716 6046 . - . ID=g5938;Name=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS mRNA 1716 6046 . - . ID=g5938.t1;Parent=g5938;Name=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 5228 6046 . - . ID=g5938.t1.exon1;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 5228 6046 . - 0 ID=cds.g5938.t1;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 4634 4980 . - . ID=g5938.t1.exon2;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 4634 4980 . - 0 ID=cds.g5938.t1;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 4045 4386 . - . ID=g5938.t1.exon3;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 4045 4386 . - 1 ID=cds.g5938.t1;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 2154 3592 . - . ID=g5938.t1.exon4;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 2154 3592 . - 1 ID=cds.g5938.t1;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS exon 1716 1819 . - . ID=g5938.t1.exon5;Parent=g5938.t1 NODE_1554_length_10503_cov_38.6718 AUGUSTUS CDS 1716 1819 . - 2 ID=cds.g5938.t1;Parent=g5938.t1 #PROT g5938.t1 g5938 MAAVSANTTHATGDAAPTCTFEVSTTLTVVPTSAYTLFVGLVDTSFIPWENVTTVSVSTKITTAVPACTVLCVNGGVCSSTNKCTCPTGFDGPTCATAVVPPVDPCATHDCSGLGVGGECASVGTNAHCTCKVGFMMNGTMCEDVDECGENPPCHPKAVCKNTPGSFACVCPSDSDGTGIGKTGCTPRVRWRGAAQYYVFVRALNAAGLYSPSSVTNGVMVDLTVPGFIRAYIVSMVDALIDGHNQAVFQSNGTALTVLFSCADYESGIARYEVAVGHSTGPESVRPFQPVAIVDPNDDTIMTVVTKISLAHNESYFATVRAINGAMLSSSLETAPVLVDLTPPVVTNVTVSVSVLNKTVDGSGATFTTTDDRIAIKYEGFSDPESGIKYYDWAIGSTPGGSDIQRFVSVGFNYSTSALRTAMGTSAFKHYNDTDMTGLTLGLFSGKSETGRNISSIRRFHSQFLLERYRTLWNTVRAHNHAGITSQVTMQQPVVVLSGTDYRFAEADDIDAHFPRRAKPVGITMSLSRTPDTKMLNNGTLVAGDISPEDYDAPVTLEPGTVPFLQKPVQFTSGNKMVQFLNLSFVLSDAATVVKVSITLSGPALKTATEGDGFVELVTWDAASRQWLAGTGTCGSSKLTGTPATVDGVEARVFEWTVCPRDVTRTRANSQSISFSQYTFATSQIIGGKGTSSVAPIVGSVIGALALAAVVVGAVVVYRRRQNAPRHKGMTGVHRTLSQENVIEDWMATHDDIAMLDNPMHRFRGRSVEDLTVAGDVTLAHRPTHAPLSKAEDREVLLFVDEEGVTVHPVAKESPISEVSAVSAAFIEPVVAPEESVLMRHALEVTRVAQEPTAQERVAAEWMFDKDDIEMLDNQKHALLRTGSRDNLLETVPSGSRATADVLIEKMRLADDVSDGQELARDRSTGKGAAAAMATRFVDTSRVSAGVDDPNTVEMHAVGDVDVDDEEDDEEEESPLNDPQVVAKVNDFAMYSRRAFGLHTKFETVRKNKENILKKK* # ORIGINAL: g1804.t1 original gene structure, not modified by PASA NODE_1666_length_9907_cov_40.4833 AUGUSTUS gene 3452 9804 . + . ID=g1804;Name=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS mRNA 3452 9804 . + . ID=g1804.t1;Parent=g1804;Name=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 3452 3536 . + . ID=g1804.t1.exon1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 3452 3536 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 3776 3844 . + . ID=g1804.t1.exon2;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 3776 3844 . + 2 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 3995 4143 . + . ID=g1804.t1.exon3;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 3995 4143 . + 2 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 4560 4813 . + . ID=g1804.t1.exon4;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 4560 4813 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 5072 5189 . + . ID=g1804.t1.exon5;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 5072 5189 . + 1 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 5439 5915 . + . ID=g1804.t1.exon6;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 5439 5915 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 6283 6369 . + . ID=g1804.t1.exon7;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 6283 6369 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 6623 6826 . + . ID=g1804.t1.exon8;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 6623 6826 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 7013 7350 . + . ID=g1804.t1.exon9;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 7013 7350 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 7558 8012 . + . ID=g1804.t1.exon10;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 7558 8012 . + 1 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 8141 8211 . + . ID=g1804.t1.exon11;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 8141 8211 . + 2 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 8537 8646 . + . ID=g1804.t1.exon12;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 8537 8646 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 8916 9032 . + . ID=g1804.t1.exon13;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 8916 9032 . + 1 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 9236 9305 . + . ID=g1804.t1.exon14;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 9236 9305 . + 1 ID=cds.g1804.t1;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 9670 9804 . + . ID=g1804.t1.exon15;Parent=g1804.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 9670 9804 . + 0 ID=cds.g1804.t1;Parent=g1804.t1 #PROT g1804.t1 g1804 MEGLFAGGAGKIAEKSRGLQNFISEIRACKSKEAEQKRINKELNNIRNKFKGDKQQQLSGTQRKKYVAKLLYMFLLGVDIDFGHMEAVGLIASNVYSEKMIGYLFVTVILNENSELIRLIIQSIKNDLMSRNESHVCLALNCIANIGGKEMSESLSQEVQKLLVSADSKNFVKKKAALTLLRLFRKYPEVLPAGEWTSRIINLLDDDDLGVVQSVVSLLLALVQKDPYEYRACTSKAVARLYRVANGEDNLDGYVYYHVPAPWLQVKLLRLLQAFSLSEMESATQRRLLDVLGKIVAKASAEPSKDKNNKDHTMQYFNARNAVLFEAIQVIIHIESETDLLIQSSNLLGKFLSSKETNLRYMALEAMTSLATVEFAHEPLKQHQPTVIAALRQEKDISVRRRALDLLFNLCDKENARVIVKELLSYLQKADYELREEMVLKIAVLAERYAEDYTWYVDTILKLITLSGDSVSEEVWHRVIQVVTNRGEDIQEYACRVVFEALQQPATHEKMVRVGGYIFGEFGHLIANDPKSSPESQFEVLHSHYGMVGIETRAMLLSTYVKFVNLFPELKPHIVDIFRHPNQSRNADSEIQQRAVEYLALASYARDDVIQTVLEAMPNFPERESSILSKLKMKEDHLTDKPHEASRRRSSVSAHDERTRAASDTTSAPAPARGGVDDLIGIGGDQQQQVQQQGSGPAGLTAGAAPPPTAGAEKWLPRFVCSNEGVLYEDDFLQVGVRSEFKNNLGRVALYFGNKSKQYSLDNFLSNVYVKPVPTVLPPGQQSQQFINIECIKEFEAHPLVAISFSVAGRPVGVSLRLPVYISKFFSPMEMNQQDFFNRWKQLGSGPLEAQKIIQARDAMDVPLMKKKVSTFGLTLLEGIDPNPDNAVAAGIVQTSSGQVGCLLRLEPNFDAK # ORIGINAL: g1802.t1 original gene structure, not modified by PASA NODE_1666_length_9907_cov_40.4833 AUGUSTUS gene 356 899 . - . ID=g1802;Name=g1802.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS mRNA 356 899 . - . ID=g1802.t1;Parent=g1802;Name=g1802.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 762 899 . - . ID=g1802.t1.exon1;Parent=g1802.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 762 899 . - 0 ID=cds.g1802.t1;Parent=g1802.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS exon 356 437 . - . ID=g1802.t1.exon2;Parent=g1802.t1 NODE_1666_length_9907_cov_40.4833 AUGUSTUS CDS 356 437 . - 0 ID=cds.g1802.t1;Parent=g1802.t1 #PROT g1802.t1 g1802 MSTQKYTSFGTIAIHVGQEPDKETGAVVPPISLSTTFKQDSPSVHKGFEYSRSGNPTRNNYEACVAALENAKY # PASA_UPDATE: g1803.t1, single gene model update, valid-1, status:[pasa:asmbl_2277,status:12], valid-1 NODE_1666_length_9907_cov_40.4833 . gene 1438 2487 . - . ID=g1803;Name=g1803.t1 NODE_1666_length_9907_cov_40.4833 . mRNA 1438 2487 . - . ID=g1803.t1;Parent=g1803;Name=g1803.t1 NODE_1666_length_9907_cov_40.4833 . five_prime_UTR 2450 2487 . - . ID=g1803.t1.utr5p1;Parent=g1803.t1 NODE_1666_length_9907_cov_40.4833 . exon 1438 2487 . - . ID=g1803.t1.exon1;Parent=g1803.t1 NODE_1666_length_9907_cov_40.4833 . CDS 1502 2449 . - 0 ID=cds.g1803.t1;Parent=g1803.t1 NODE_1666_length_9907_cov_40.4833 . three_prime_UTR 1438 1501 . - . ID=g1803.t1.utr3p1;Parent=g1803.t1 #PROT g1803.t1 g1803 MEGNQGDVRVSTALREGTKVVHEQAEQTVIVARILAGVVTRPEYVRLLRALRCVYAALEKELDSAAARDENVRLLHFPRELARTDAISEDIAFHTDTDKPSSSIESDFQPTPAVVKYIERLRSVSSSPKPWLLVAHSYTRHLGDLSGGQILARRIKKIFPSRPSGIVDPRGRTGVSFYTFDLVHDPAGFKTLFRDRMNMLALGDADLALLTEEAVEAFKLNIGLFEEIGREMQLERPIGKLDGGHAHGHGHGHGHGGEANGHVHSHAHGPDVAPLHASKPANAATGIRIAVLSLVVALLAYYLTAFSRFGFVWSA* # PASA_UPDATE: g7720.t1, single gene model update, valid-1, status:[pasa:asmbl_6297,status:12], valid-1 NODE_3608_length_3128_cov_38.0675 . gene 135 2894 . - . ID=g7720;Name=g7720.t1 NODE_3608_length_3128_cov_38.0675 . mRNA 135 2894 . - . ID=g7720.t1;Parent=g7720;Name=g7720.t1 NODE_3608_length_3128_cov_38.0675 . five_prime_UTR 2893 2894 . - . ID=g7720.t1.utr5p1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 2707 2894 . - . ID=g7720.t1.exon1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 2707 2892 . - 0 ID=cds.g7720.t1;Parent=g7720.t1;5_prime_partial=true NODE_3608_length_3128_cov_38.0675 . exon 2300 2470 . - . ID=g7720.t1.exon2;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 2300 2470 . - 0 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 1934 2070 . - . ID=g7720.t1.exon3;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 1934 2070 . - 0 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 1641 1761 . - . ID=g7720.t1.exon4;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 1641 1761 . - 1 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 1353 1415 . - . ID=g7720.t1.exon5;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 1353 1415 . - 0 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 1011 1079 . - . ID=g7720.t1.exon6;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 1011 1079 . - 0 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 751 845 . - . ID=g7720.t1.exon7;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 751 845 . - 0 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 397 520 . - . ID=g7720.t1.exon8;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 397 520 . - 1 ID=cds.g7720.t1;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . exon 135 209 . - . ID=g7720.t1.exon9;Parent=g7720.t1 NODE_3608_length_3128_cov_38.0675 . CDS 135 209 . - 0 ID=cds.g7720.t1;Parent=g7720.t1;3_prime_partial=true #PROT g7720.t1 g7720 GESRDKNEKNFSFTFLPLISADGTTIKDDRHNLAIYKYDKKIDDPRIYLKEAASNNPKSALERNPKESFTVRTLLCSTKLTQNANLLSLLRWNSGLSDLEGTLKRITYIEPDEIVKFMQDIFDALFNILAKDQNRYGSLVFDALVFILGILTDKKYTNFRPVLDRYIAEFFSMATAYGSLLDTLRKYLVNCEDHSLSQQVRSTMKALEFLVKFIIRSRELYADTQMMVGGVTDVRGGEDFKVAMFAMLKDFNSVMARKSPTVIGTQTAALQNFGPMYRSLSPVFTSSELGKVVGQFIDAVVYDPSDRSKAKLQQTKLQLMLQVVEDDLFLNREFRGAFLPSFVQQLK # PASA_UPDATE: g6123.t1, single gene model update, valid-1, status:[pasa:asmbl_7119,status:3], valid-1 NODE_4229_length_1977_cov_34.4232 . gene 87 1141 . + . ID=g6123;Name=g6123.t1 NODE_4229_length_1977_cov_34.4232 . mRNA 87 1141 . + . ID=g6123.t1;Parent=g6123;Name=g6123.t1 NODE_4229_length_1977_cov_34.4232 . five_prime_UTR 87 93 . + . ID=g6123.t1.utr5p1;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . exon 87 252 . + . ID=g6123.t1.exon1;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . CDS 94 252 . + 0 ID=cds.g6123.t1;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . exon 469 646 . + . ID=g6123.t1.exon2;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . CDS 469 646 . + 0 ID=cds.g6123.t1;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . exon 830 1141 . + . ID=g6123.t1.exon3;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . CDS 830 951 . + 2 ID=cds.g6123.t1;Parent=g6123.t1 NODE_4229_length_1977_cov_34.4232 . three_prime_UTR 952 1141 . + . ID=g6123.t1.utr3p1;Parent=g6123.t1 #PROT g6123.t1 g6123 MVNLLLTGRACSNVFDGDMTLDSGGDTGSLLKGVRSQSSIGFLSLFEHYDSVKVGNFLKNPKFPLWVVCSESHFSVLFCADRECLANPRCKKFDMYYFDGLARQEEEIRLTVDLSTSFRANAKDELVPPLEHCIRTRWMGASISWNGSDPIL* # PASA_UPDATE: novel_model_20_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_7118,status:3], valid-1 NODE_4229_length_1977_cov_34.4232 . gene 1284 1965 . + . ID=novel_gene_20_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_4229_length_1977_cov_34.4232 . mRNA 1284 1965 . + . ID=novel_model_20_5b6be656;Parent=novel_gene_20_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_4229_length_1977_cov_34.4232 . five_prime_UTR 1284 1566 . + . ID=novel_model_20_5b6be656.utr5p1;Parent=novel_model_20_5b6be656 NODE_4229_length_1977_cov_34.4232 . exon 1284 1965 . + . ID=novel_model_20_5b6be656.exon1;Parent=novel_model_20_5b6be656 NODE_4229_length_1977_cov_34.4232 . CDS 1567 1944 . + 0 ID=cds.novel_model_20_5b6be656;Parent=novel_model_20_5b6be656 NODE_4229_length_1977_cov_34.4232 . three_prime_UTR 1945 1965 . + . ID=novel_model_20_5b6be656.utr3p1;Parent=novel_model_20_5b6be656 #PROT novel_model_20_5b6be656 novel_gene_20_5b6be656 MHTFRQQKTIDDDTARRGETNKNTKRNVTAIRSVTTPKPAALYPNNNNNNNTQHIQLSTHASEGEWGTCVGDMCVKICVEGQKCIGPQNRQRQHVEEKTQRKWQGQDRTKQETSDSKAYARSYRH* # ORIGINAL: g2324.t1 original gene structure, not modified by PASA NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS gene 2282 3021 . + . ID=g2324;Name=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS mRNA 2282 3021 . + . ID=g2324.t1;Parent=g2324;Name=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS exon 2282 2375 . + . ID=g2324.t1.exon1;Parent=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS CDS 2282 2375 . + 0 ID=cds.g2324.t1;Parent=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS exon 2483 2766 . + . ID=g2324.t1.exon2;Parent=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS CDS 2483 2766 . + 2 ID=cds.g2324.t1;Parent=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS exon 2875 3021 . + . ID=g2324.t1.exon3;Parent=g2324.t1 NODE_2566_length_5854_cov_47.8448_potentialcontaminant AUGUSTUS CDS 2875 3021 . + 0 ID=cds.g2324.t1;Parent=g2324.t1 #PROT g2324.t1 g2324 MYAAQRTTDVSTRLHVDICDAVNVALFVGKNDVDDNSTDGAEWTFWRAKDRSRLAAALYDMSVEEQQQSAKKRMKAAVHVLHGVHDQTIYVKDEWIIKLREQGIIEVKYTQKRGDAVFIPAGCPHQVKNLRPCIKLAMDFVSPDTMGESLALAAEFCQLPMEYNNAEDKLQASI* # ORIGINAL: g2863.t1 original gene structure, not modified by PASA NODE_6087_length_642_cov_43.873_potentialcontaminant AUGUSTUS gene 2 436 . + . ID=g2863;Name=g2863.t1 NODE_6087_length_642_cov_43.873_potentialcontaminant AUGUSTUS mRNA 2 436 . + . ID=g2863.t1;Parent=g2863;Name=g2863.t1 NODE_6087_length_642_cov_43.873_potentialcontaminant AUGUSTUS exon 2 436 . + . ID=g2863.t1.exon1;Parent=g2863.t1 NODE_6087_length_642_cov_43.873_potentialcontaminant AUGUSTUS CDS 2 436 . + 0 ID=cds.g2863.t1;Parent=g2863.t1 #PROT g2863.t1 g2863 LKKRILNSVTLRVYEDVNNVPSVPVSTVLYLNLPLPSDVQQAIFVPPATNNSKSKPSAKTLIEIPTTNEELADHMEMLMGNLNQTVSENQRLQSANKFLREQLNIRIGKGGKDAKKSKSGKSGKSGKSGKSSKAGGAKGVCTVM* # ORIGINAL: g3044.t1 original gene structure, not modified by PASA NODE_4330_length_1810_cov_38.6715_potentialcontaminant AUGUSTUS gene 267 1731 . - . ID=g3044;Name=g3044.t1 NODE_4330_length_1810_cov_38.6715_potentialcontaminant AUGUSTUS mRNA 267 1731 . - . ID=g3044.t1;Parent=g3044;Name=g3044.t1 NODE_4330_length_1810_cov_38.6715_potentialcontaminant AUGUSTUS exon 267 1731 . - . ID=g3044.t1.exon1;Parent=g3044.t1 NODE_4330_length_1810_cov_38.6715_potentialcontaminant AUGUSTUS CDS 267 1731 . - 0 ID=cds.g3044.t1;Parent=g3044.t1 #PROT g3044.t1 g3044 MASGSFCEIAKKWRLASSLTMVIEEAPIDFNKVPAVGRKAAMQAYAEIWSKSITGGTESLRAEKAEAVKQYVNRMIKERSPVSYDPLALDKSPDFVQELEREWSDIVGVRTYGEFIETFEYLLAGVVQRTRERNLYGTPHGLLFKLPNHLRVLDCCGADGNSSLAGLAGGSSLAGLAGGCFGGCPSLAGGGVSPGCVSSLSGGCSFLAGGVGGNGRGSAGKSGSDVAPRRRAELESDGWPKNAARNYLVNCSAVFYDQPDEDTSAFLKMGGKKYLGGQFRWKRDSRLNFRVELLNGSMVMTTFEIKANELIVPMDARVYDRVFALIESTLPPYQKSMLRLKNLPKEYEDYAVLIWAEPRPRMELHAFAWNYEPPREGEADEGVGYCVWGPCLFHIYLTREGEKSHIFRSFVSEEVAAKIVKKYSSCMHPNVCDIVIATDYGDCTGENDPEIDVAPSSVEDDETSEIIGRAAERDISDISINSRQRRAQ # PASA_UPDATE: g6000.t1, single gene model update, valid-1, status:[pasa:asmbl_2600,status:12], valid-1 NODE_177_length_33421_cov_39.7363 . gene 9854 12786 . - . ID=g6000;Name=g6000.t1 NODE_177_length_33421_cov_39.7363 . mRNA 9854 12786 . - . ID=g6000.t1;Parent=g6000;Name=g6000.t1 NODE_177_length_33421_cov_39.7363 . five_prime_UTR 12732 12786 . - . ID=g6000.t1.utr5p1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 12657 12786 . - . ID=g6000.t1.exon1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 12657 12731 . - 0 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 12361 12469 . - . ID=g6000.t1.exon2;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 12361 12469 . - 0 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 12087 12247 . - . ID=g6000.t1.exon3;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 12087 12247 . - 2 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 10894 11861 . - . ID=g6000.t1.exon4;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 10894 11861 . - 0 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 10384 10576 . - . ID=g6000.t1.exon5;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 10384 10576 . - 1 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . exon 9854 10212 . - . ID=g6000.t1.exon6;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . CDS 10123 10212 . - 0 ID=cds.g6000.t1;Parent=g6000.t1 NODE_177_length_33421_cov_39.7363 . three_prime_UTR 9854 10122 . - . ID=g6000.t1.utr3p1;Parent=g6000.t1 #PROT g6000.t1 g6000 MAQQPAVAFRPPKIQDNPAGWGPVSVPEDFKDIPYQPFSKSDRIGKVSDWTGGTYTDRRYANRYSSQYGAGGAAFSYYHEEDESSFHLVDSSRQPSRPKFGQQRRFQQQNQRRPQQNPRRTERRGMQKLGGGQGGRQFHRRRDDRQQRVREASIEVRSDWKLLEEIELARLAKLNFGVSDPDDVMMCGAVEYYDKSYDRVNTKLERPLAKVDRVYHTVTTSDDPIIRQLSSEGGRVFATDAILATLMACPRSVYSWDIVVTRVGDKVFFDKREGSTFDLLTVNETAQDPPTDEADAINTPASLALEATYINRNFVQQVLKREGKTFEHPNPFVSEGEEAPSVAYKYRKWDLGSDIGLVARCELDAAFWKKENTDEGLMMIKALNEYDPKTSSNSVDWRQKLDTQKGAVLATELKNNSFKLAKWTASALLGGADQLKLGYVSRNNRKNHTSHVILGTQGFNPGELATQINFNMNNAWGILRMFVDTVLALPEGKYLILKDPNKAVVRIYEVPEDAFDQTDSEGDDEGDNVGQ* # ORIGINAL: g5999.t1 original gene structure, not modified by PASA NODE_177_length_33421_cov_39.7363 AUGUSTUS gene 5867 9098 . + . ID=g5999;Name=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS mRNA 5867 9098 . + . ID=g5999.t1;Parent=g5999;Name=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 5867 7687 . + . ID=g5999.t1.exon1;Parent=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 5867 7687 . + 0 ID=cds.g5999.t1;Parent=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 8013 8714 . + . ID=g5999.t1.exon2;Parent=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 8013 8714 . + 0 ID=cds.g5999.t1;Parent=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 8877 9098 . + . ID=g5999.t1.exon3;Parent=g5999.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 8877 9098 . + 0 ID=cds.g5999.t1;Parent=g5999.t1 #PROT g5999.t1 g5999 MAERALRSRRAAGVENGTVQGVSAAVTAHNAAVPAATGAAEGPGAQAIITRGRTRAALAELNAAVPTTTPAPASARTPHSDSSCGAAAYASSLILKTPSNQAAMADKTVNMRSRDTAKGSSNAACVSAQSSAQGSGTTKASAARSNRSSPEAPPVTDGNKARGTRASPQSSPTSANGSKCATPQSSPESGNNIKAAGGVTRKASRPRALSSTTGSRPTTHAATKVRHLGAAPLAVTDSSTIQPTEEMQPDNLKTFAELLKQVLAQRAEEQATRRQEALRAEELQLRLEAERRQEAVRVEAERRQEALRTEELQLRLEAERRQEALRAEELQLRLEAERRQDALKIEALEKTVHVALQIQTRAGISKRLRTHPSQFYDQVDTALNGTTRAPATKFALDESDITEVEWDKLCKYFGEEHGLQPTSTVTPSDVDGGAEGPEPSQEKPWPGLDKPGRKPKGQLKSAQPPRLDGHVSHTAAPPVRSSGPKGDALEPFAALDVRAAERTCTDFPPLAPTRRTFHIDRQWNFTKECQVQKFFNGLFPIFLEDDASREVYDHSHTIVSPAFGGMELKPDLVLAAKGRSANWSTVMSVTELKCKFNTADLREGVAQSVLLQNAFDLCARDEVRALGATVGSQSVPVDICIKLFKGESASACLRHGRELSALKELQPNALQPAPKSVPMLVGKVACSIGDTEFLGVASTPLLSSPASSVQVGHMFATVRQVWLALRYVLDKGLLHLDVKPENIACSADGSQSALIDFDCAIKKSDSMGLKYVGTFEFMSLPMMAAYLSIKSGEENVRAVTVDELHDMESLFFTAFFLAAKYVGTTGWMSELCLLVIQSKPEWEFFQLKKWMHLDKAAFDKIVEQMPFQLANLKPFLVGAREALYGDVPSSCTSRLQHARDVFNEHLEAPERCLE* # PASA_UPDATE: g6003.t1, single gene model update, valid-1, status:[pasa:asmbl_2601,status:12], valid-1 NODE_177_length_33421_cov_39.7363 . gene 29511 33407 . - . ID=g6003;Name=g6003.t1 NODE_177_length_33421_cov_39.7363 . mRNA 29511 33407 . - . ID=g6003.t1;Parent=g6003;Name=g6003.t1 NODE_177_length_33421_cov_39.7363 . five_prime_UTR 33401 33407 . - . ID=g6003.t1.utr5p1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 33398 33407 . - . ID=g6003.t1.exon1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 33398 33400 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 32558 33046 . - . ID=g6003.t1.exon2;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 32558 33046 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 32132 32312 . - . ID=g6003.t1.exon3;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 32132 32312 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 31536 31897 . - . ID=g6003.t1.exon4;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 31536 31897 . - 2 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 31060 31175 . - . ID=g6003.t1.exon5;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 31060 31175 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 30674 30776 . - . ID=g6003.t1.exon6;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 30674 30776 . - 1 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 30293 30418 . - . ID=g6003.t1.exon7;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 30293 30418 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 29965 30152 . - . ID=g6003.t1.exon8;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 29965 30152 . - 0 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . exon 29511 29716 . - . ID=g6003.t1.exon9;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . CDS 29545 29716 . - 1 ID=cds.g6003.t1;Parent=g6003.t1 NODE_177_length_33421_cov_39.7363 . three_prime_UTR 29511 29544 . - . ID=g6003.t1.utr3p1;Parent=g6003.t1 #PROT g6003.t1 g6003 MEEIRDLLAPEQNKRLELKENPETGVYVKDLSSFVVKSASELDNLMTNGNKNRVVGATHMNEHSSRSHAILTLTIECIENGPDGKEHLRMGKLNMVDLAGSERQSKTGATGDRFKEAAKINLSLSTLGNVIASLVNGASHVPYRDSKLTRLLQDSLGGNAKTLMIANVGPASYNYDETLNTLAYANRAKNIKNKPKINEDPKDAMLREFQQEIERLKMELENAEGGGGGGGGDDDDDDGGDGGDGRRRRRKGARKEKGPPANKGEKKPRLQGVPQEKLEEMQRKLDAEKRALTETTDIADSERRRIAEELEDRQQELTMASEEREKLNAKLKNMQEKLLVGGVNLLEKAEEQERLLEQTNRELAEKQRKEELLSKEIKLKEDERFELEGHYTSLQEEAQAKKRKLKKVWGMFMTAKSEINEIQEEMQRERETMLDHIRELTRELRLKMVVIDNYIPPEYQELIESHATWIEDLDEWQLQHIAHAGNNIHKLPEDTKDEARVQPAVHTEMENIYLSYDQFVENSNRTQTARPKTARPKTAGAKRPKTATSKRQEDAAADGEGEEQYPTSNRRQSSRKHYA* # ORIGINAL: g5998.t1 original gene structure, not modified by PASA NODE_177_length_33421_cov_39.7363 AUGUSTUS gene 363 5084 . - . ID=g5998;Name=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS mRNA 363 5084 . - . ID=g5998.t1;Parent=g5998;Name=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 3040 5084 . - . ID=g5998.t1.exon1;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 3040 5084 . - 0 ID=cds.g5998.t1;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 1983 2669 . - . ID=g5998.t1.exon2;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 1983 2669 . - 1 ID=cds.g5998.t1;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 970 1057 . - . ID=g5998.t1.exon3;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 970 1057 . - 1 ID=cds.g5998.t1;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 705 845 . - . ID=g5998.t1.exon4;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 705 845 . - 0 ID=cds.g5998.t1;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 363 461 . - . ID=g5998.t1.exon5;Parent=g5998.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 363 461 . - 0 ID=cds.g5998.t1;Parent=g5998.t1 #PROT g5998.t1 g5998 MSNNMLEYETHLFAELLAEDALVIMARGLGLERLVASCLRLHCDPQSLVLVVNATAQEERYFLETLRTAGVEEARLPRVVTNEYTGADRSEAYVKGGVVIVTSRILVVDLLKKRLPTHVVTGVVICNAHRVVETSTEAFIMRLFRQDNKKGFVKAFSDSAEAFLPGFMRVEKVMKCCYVGKLHLYPRFQASVVSSLQPHAPEVIELRQKMTARMTEIQAAIVEIMDECIGELKRCNPSIDDTNLTVENGLFSSFESLVRQQLEPIWHQTSQKTRQLAADLSTLRKLLDYLVRYDCVTFNRFLATIRASNKAFSHHTWMFLDAADRMFTSSRDRVYRVNGVGKGAGGTASAGAATCGKVKTPGTVAHADSNSTNLRVGGGTAGTGTGIGTDASFNTGAQGVSLVLEENTKWGLLLEILREIDKENARAPARDPRSANMGRASTRGDDGALNRTLPDRGESDGGSDVHMGDAESTVAVDAGCVDTVPRVGEGGEGSGDVCVEGHEHGSGGSVLVLASDDRSCHQLREYLQDGGEAMLLRLYLRDVAFRGELNKVDANVIVPSTVAQDDALIAAAQPEGHARKRQRMESDARGAGGDIAQRWREGAVDGGGVGVGVGGGVAGRGGATGGRSAYQPRMRRREKRKVAERETERRTEEAELASLRDAAVGKKIKAKDAAPQARQTRGSERSHNFEPLPTPEDPYAACGGHSLNFAGSEIGLTSTPRIVLHAIRNKEGRHSLSSALSACMPRFVVLYDADPGAVRTIEAHQALHPHVAMRVYYVLYDTSVEEQKYLTAIRREKDAFQFIIREKSIMVVPSEREGRTDVSPATVDASALASSRKAGGRTDALAVNKGKGKVVVDMREFRSTLPSLCHQRGMAVDPVTLEVGDYILAPEMCVERKSLSDLIGSLKNGRLYNQAEAMCRYYKLPILLIEFDEGKSFSLQSKSELTSEVSFQNLSSKLVLLTLHFPNLRILWCQSPHATAEVFETLKANFGEPDPAVAAAIGVDGPVNAELGSMSNPGPQ # ORIGINAL: g6002.t1 original gene structure, not modified by PASA NODE_177_length_33421_cov_39.7363 AUGUSTUS gene 20113 28853 . - . ID=g6002;Name=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS mRNA 20113 28853 . - . ID=g6002.t1;Parent=g6002;Name=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 28503 28853 . - . ID=g6002.t1.exon1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 28503 28853 . - 0 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 27847 28147 . - . ID=g6002.t1.exon2;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 27847 28147 . - 0 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 26918 27211 . - . ID=g6002.t1.exon3;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 26918 27211 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 26347 26649 . - . ID=g6002.t1.exon4;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 26347 26649 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 25819 26106 . - . ID=g6002.t1.exon5;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 25819 26106 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 25388 25675 . - . ID=g6002.t1.exon6;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 25388 25675 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 24832 25226 . - . ID=g6002.t1.exon7;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 24832 25226 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 23851 24571 . - . ID=g6002.t1.exon8;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 23851 24571 . - 0 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 23192 23318 . - . ID=g6002.t1.exon9;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 23192 23318 . - 2 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 22689 22818 . - . ID=g6002.t1.exon10;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 22689 22818 . - 1 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 22345 22457 . - . ID=g6002.t1.exon11;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 22345 22457 . - 0 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 21931 22122 . - . ID=g6002.t1.exon12;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 21931 22122 . - 1 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 20834 20935 . - . ID=g6002.t1.exon13;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 20834 20935 . - 1 ID=cds.g6002.t1;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS exon 20113 20458 . - . ID=g6002.t1.exon14;Parent=g6002.t1 NODE_177_length_33421_cov_39.7363 AUGUSTUS CDS 20113 20458 . - 1 ID=cds.g6002.t1;Parent=g6002.t1 #PROT g6002.t1 g6002 MASPPALPGSLRRSLYSPLLLALCLAIVPVTVDAGARDANVAFTLQQVMYATKASATTEFCSTPCDTYCLVDLEYTLPLGGSTTTIAKGKQTLTKTNTASPAYNFVITGRVSNFAEKGSFRVTLSCVDINNNNKFFTSQSFAFNADPLKSVTNREEGLTATFGIVSVVRSMSISCDETYFGASCETQCLVSSLCLGCTSQGTCSACGPGLTGSLCTTDDNVEPTGIALSSTVVTENAPIGSIIGYLAAIDKNTVNGQAFTFALLNSANGRVMLGNNNTLLVGARIDYEQATSFSVQLSVSDGFGSASTVFIIIVQNVYEAPTGIIANLSLPLSIPENANVGSVLATFRPENPDATIAQPPSFAFNVTSPVFGFSGNALVTLATLDFETTAKYSLNIALTDGGRSPVIYRVFDVVVGDVNEPPTSFTLSGTTVRENAATNTAIGTAVCSDPESGASCTFTVLPPADALFNFAGNSLRSSAPFNFETNSTFRITVRATDSGSLSRDFPVTIAVINVDDPPTDIVLSSLLAVEKAAAGAVVAAITTVDEDTPTSRFVYTVTSDPPDAFAVNAGNLTTRTVLNATATPAYLVTITATDGVNSFTKTFTITVKECLCVNGGRCISYGVCDCAGVVGFGGETCNSSCTALTSNKKYGIGCASDCRCVNGAACDSISGACTCEFGWIGSFCNEAMHPSKPSVTIVSFSATKIVLSWTHIEEELAGRVAWGPYSYFINRYGCPDKMIEVGTATNYTDTDIASRQSYTYSVIAVNSKQQSSPAADTRRIVALSQLPPDRPVVSAQPLIEADSVNPAVMRSVVKLSWTEDGANAAVEKTFVFRNREVLVVAFFASGSTGRASYTDTTVVAGMKYVYNVTTMNAFGNSSAGESPEIIAATIPDGTSTGVTAGASSSTSVNAGYIAGSICAVAAGVAAVLGVLWYRRRKEKRKLHMMAMSELALIDTVVRKPEIAEIQLPGSAIILRRRLGEGEFGEVYLADVVLAGSDKPRVTAVKTFKLTQFSTAEDIRSARSAFMSEIDVMRSVPPHVNVVSLLGVCTIDDPNCMVIEYAEYGDLRHYVSENSSALSTADLTCFCIDIASGMEHLESQKIIHRDLAARNCMVAAGPRPSNVRENAWPLTRLGRVVIKIADFGLSKEKNGESSDYYVARTRKKMPVKWWEVFGRGSKPYPGLQNHEVLNHLLQNRRMDPPQGTPDMAYECMTNCWKRLPETRPKFRDVVLQLRRCMAALSSGEEAAGGASRKSAGKKRKDDTTSVLHNTAHAEPGPSTGEYKLMDVDVDAEAGESAGRYETLEVPLSEHNDRHTNI* # PASA_UPDATE: g6001.t1, single gene model update, valid-1, status:[pasa:asmbl_2599,status:3], valid-1 NODE_177_length_33421_cov_39.7363 . gene 13525 19102 . + . ID=g6001;Name=g6001.t1 NODE_177_length_33421_cov_39.7363 . mRNA 13525 19102 . + . ID=g6001.t1;Parent=g6001;Name=g6001.t1 NODE_177_length_33421_cov_39.7363 . five_prime_UTR 13525 13841 . + . ID=g6001.t1.utr5p1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 13525 14247 . + . ID=g6001.t1.exon1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 13842 14247 . + 0 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 14435 14478 . + . ID=g6001.t1.exon2;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 14435 14478 . + 2 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 14777 16422 . + . ID=g6001.t1.exon3;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 14777 16422 . + 0 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 16608 17476 . + . ID=g6001.t1.exon4;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 16608 17476 . + 1 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 17668 17812 . + . ID=g6001.t1.exon5;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 17668 17812 . + 2 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 18408 18517 . + . ID=g6001.t1.exon6;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 18408 18517 . + 1 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . exon 18776 19102 . + . ID=g6001.t1.exon7;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . CDS 18776 18933 . + 2 ID=cds.g6001.t1;Parent=g6001.t1 NODE_177_length_33421_cov_39.7363 . three_prime_UTR 18934 19102 . + . ID=g6001.t1.utr3p1;Parent=g6001.t1 #PROT g6001.t1 g6001 MVDAPAVAGAAATPVKAHSASAGASPRATPAEPVEGKEKDNKDTAGTPARTPKTFAPPPEKNPWNKTPKTAAGGDAKPAASVHDQHADVPAAVKAVATHVSPAASVPAPTQAQAQANKDAPATTAASAPAEHADDGKGKNAKKPKRKTSKAPELGDLKAWPSLGEAVTDQPTPKPAGSAAMTAKEEEEAHRKVSKSKWVPFKVYDAPASGATDAKPAEGEPASAPAHVQTGQAQQQGHAHQVGQGQASRNNAQSHGQQQQHGGRRGGAQAGGNRAGNNAASGRSQQQGHKDAPAAAAAVTATPSSATAPAVAAAVAAEASGAAPPSATATSTAPAAQPQSHTQSQSSRGGNAGGQQQQQQQGGHGQAQRGGRSGAARGGAGNKGHHGASSAGSGRGGYSAGYSGSGYRQQSSWEGQANSQSASAVPSGAPAGGQQQQAYYGAGAQGGFRGGAAASASASAASAPIVDEAALREAVRVQIEYYFSTDNLVRDVYLRRQMDDKGFVPLVFIANFNRLKQLGADVAFIADALANSDKVDLVESRIRKRGDWHAWLLPQTPTTQPAQPLPGTTPAAAATQPQGAKHVTLADSVSAEPFVPRVAAAPTVPATAQQQQQQSAPAAAAGSHPPEWTEVRRRRHNSRSFSAEPGEEKTFGARDSHGSSGKKGKKDDYEELDFQFDEEMMGSGKKGQRLEDDDSDSESDADSEMSDEEVSKLLIVTQTPPVRKHGGHDRTGNFMSRMQWTKQWAQMVNDGLYYYEQDLVSVDDETAYVNRTEQIASSMNKLGIMSREEFEAAGGSGALHDKAIAAFGEQIDRHRQRTTSANYSASPANLPPVPVTSLDNSPAASQPLGLSGSQTPKTPKTPKTPKDAKKAPRFFPVAEKEDEGKPPVAPGTPQKEKTKYSENPPLEMHVGWVMGNKPHPPSATPTPSPSDPSPLARRLSESSQRVRRVSESSEGGSLPAFQHPSHEILKDGGFIQHKYHKFYQKCTRERKRLGIGQSSEMNTLFRFWSFFLRDHFNRKMYNEFRALALEDAKGGYRYGAECLFRLYSYGLEKKYRQDLFDDFQTETLADCDSGHLYGLEKFWAYLKYRKDTRPVDVMPRLKEILGKYRTLEDFRPKAGAGSAAH* # ORIGINAL: g11134.t1 original gene structure, not modified by PASA NODE_3413_length_3522_cov_38.6858 AUGUSTUS gene 44 1554 . + . ID=g11134;Name=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS mRNA 44 1554 . + . ID=g11134.t1;Parent=g11134;Name=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS exon 44 125 . + . ID=g11134.t1.exon1;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS CDS 44 125 . + 1 ID=cds.g11134.t1;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS exon 430 486 . + . ID=g11134.t1.exon2;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS CDS 430 486 . + 0 ID=cds.g11134.t1;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS exon 659 844 . + . ID=g11134.t1.exon3;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS CDS 659 844 . + 0 ID=cds.g11134.t1;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS exon 1063 1109 . + . ID=g11134.t1.exon4;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS CDS 1063 1109 . + 0 ID=cds.g11134.t1;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS exon 1392 1554 . + . ID=g11134.t1.exon5;Parent=g11134.t1 NODE_3413_length_3522_cov_38.6858 AUGUSTUS CDS 1392 1554 . + 1 ID=cds.g11134.t1;Parent=g11134.t1 #PROT g11134.t1 g11134 FIKKHLATMQDRLVGNVAAGAEDIEKEIMAQVHVMQPHPREAGAADDESSSSEEENGAAVAPAVPAARGRGAARGAARGARGAARGVAAASAGAGRGSRKRKANEDEDDDEDGGQASTPKRSARSRRARVYTESEEEEEDEAGAAASSGTEPEDEPVRPAARAPAATRGRGRGRGAR* # PASA_UPDATE: g11135.t1, single gene model update, valid-1, status:[pasa:asmbl_6035,status:12], valid-1 NODE_3413_length_3522_cov_38.6858 . gene 1975 3290 . + . ID=g11135;Name=g11135.t1 NODE_3413_length_3522_cov_38.6858 . mRNA 1975 3290 . + . ID=g11135.t1;Parent=g11135;Name=g11135.t1 NODE_3413_length_3522_cov_38.6858 . five_prime_UTR 1975 2203 . + . ID=g11135.t1.utr5p1;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . exon 1975 2320 . + . ID=g11135.t1.exon1;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . CDS 2204 2320 . + 0 ID=cds.g11135.t1;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . exon 2616 2702 . + . ID=g11135.t1.exon2;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . CDS 2616 2702 . + 0 ID=cds.g11135.t1;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . exon 3039 3290 . + . ID=g11135.t1.exon3;Parent=g11135.t1 NODE_3413_length_3522_cov_38.6858 . CDS 3039 3290 . + 0 ID=cds.g11135.t1;Parent=g11135.t1 #PROT g11135.t1 g11135 MLDLFFIFSKGGLVLWSFQGTAFVSGSPINVLIQQVLLEEKGAATKTSIQDPYALKWSFANDFDLVFVAVYQKVINLTYVEKLLDDIKSAFCGKFSAEIRPGHHEPVDFASDFNKIVKEIEAKNREEVRPNCCLCFTVERATCLRSADGPY* # PASA_UPDATE: g2894.t1, single gene model update, valid-1, status:[pasa:asmbl_9299,status:12], valid-1 NODE_7711_length_414_cov_112.879_potentialcontaminant . gene 1 414 . + . ID=g2894;Name=g2894.t1 NODE_7711_length_414_cov_112.879_potentialcontaminant . mRNA 1 414 . + . ID=g2894.t1;Parent=g2894;Name=g2894.t1 NODE_7711_length_414_cov_112.879_potentialcontaminant . exon 1 414 . + . ID=g2894.t1.exon1;Parent=g2894.t1 NODE_7711_length_414_cov_112.879_potentialcontaminant . CDS 1 309 . + 0 ID=cds.g2894.t1;Parent=g2894.t1;5_prime_partial=true NODE_7711_length_414_cov_112.879_potentialcontaminant . three_prime_UTR 310 414 . + . ID=g2894.t1.utr3p1;Parent=g2894.t1 #PROT g2894.t1 g2894 PSAQTTIVKTIKAIDVNTQTRVALKLDIAIKSSEQPTTTEDKYMQTAQKSCCCGCTCCACCVTPAVYGTRVMLVKTEIQAVLAKINEGAKVNDNDAANERAI* # PASA_UPDATE: g5963.t1, single gene model update, valid-1, status:[pasa:asmbl_4247,status:3], valid-1 NODE_240_length_29855_cov_42.0385 . gene 27831 29447 . + . ID=g5963;Name=g5963.t1 NODE_240_length_29855_cov_42.0385 . mRNA 27831 29447 . + . ID=g5963.t1;Parent=g5963;Name=g5963.t1 NODE_240_length_29855_cov_42.0385 . five_prime_UTR 27831 27907 . + . ID=g5963.t1.utr5p1;Parent=g5963.t1 NODE_240_length_29855_cov_42.0385 . exon 27831 29447 . + . ID=g5963.t1.exon1;Parent=g5963.t1 NODE_240_length_29855_cov_42.0385 . CDS 27908 29146 . + 0 ID=cds.g5963.t1;Parent=g5963.t1 NODE_240_length_29855_cov_42.0385 . three_prime_UTR 29147 29447 . + . ID=g5963.t1.utr3p1;Parent=g5963.t1 #PROT g5963.t1 g5963 MTGEIHRQRRKAILLAHPEVAKLNGVEILTFPYCVAVFLVQVALLAYVGDNMQRAIWLGFTIGPFVALGALVAIHEISHDLVFLTPAWNHWLGIVTNMTILMPLSEIFRQHHKAHHNHLGDEKNDVDVPSAREINMVSNSTFRKLMWVVFNGLVLPLRSLMRLPVKTSKWLAFNWIACIGSGLVLLATVGPAPVIYLALSMLVSQGLHPANGRLVQRHMWHDEKKFESEMDRLMCPNTFSYYGSINAWTLNVGYHVEHHDFPHIPWTRLPQLRAMAPEWYARGHYTERGIWHMFHFITKRFMTLQQLSTLSESIEIVKPSASSTASPATSTKTTEPKLDAQNSPSTATLVKRTATKERTEPQRAQAPVVETVASRTVVSSASSACSVRPSLILATSPLPLAAAAAPATALVY* # ORIGINAL: g5960.t1 original gene structure, not modified by PASA NODE_240_length_29855_cov_42.0385 AUGUSTUS gene 12429 19372 . + . ID=g5960;Name=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS mRNA 12429 19372 . + . ID=g5960.t1;Parent=g5960;Name=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 12429 12687 . + . ID=g5960.t1.exon1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 12429 12687 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 12829 17687 . + . ID=g5960.t1.exon2;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 12829 17687 . + 2 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 17924 18038 . + . ID=g5960.t1.exon3;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 17924 18038 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 18326 18444 . + . ID=g5960.t1.exon4;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 18326 18444 . + 2 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 18603 18680 . + . ID=g5960.t1.exon5;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 18603 18680 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 18835 18897 . + . ID=g5960.t1.exon6;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 18835 18897 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 19109 19141 . + . ID=g5960.t1.exon7;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 19109 19141 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 19307 19372 . + . ID=g5960.t1.exon8;Parent=g5960.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 19307 19372 . + 0 ID=cds.g5960.t1;Parent=g5960.t1 #PROT g5960.t1 g5960 MNSHTSEDRSSAGSSRPVKSSMRSDSGVRVRSQNSARFDDNVGVIPPKSPDSDGGEARDEATEHEMFERMRSMQKEILETQGPEDAAVQDAGRQSVLSEFSDVDFFEDSEPTSESEGEDDNERYNELKILEKYTHPATGVVSTMSTEAQRADRKRNMELIRQMENADNDLREKQRAVESCNDELALTKSAFNSLREEANRLSHELRDASGADAIPAVKEQRVRRLQAALDKCLAQMAMQESAVGRAEDALRVADADVSRAELARMHLTSISEEARAVLEQYEQENVVLARVRAAKEAEFDRSQARRRRRHEAKVAAAWREQEERIIRAMEAARDGHRKATERLETTLSQKKEEDITAATRARREYEKRMGAIIGLKGNMDQIRESIVARHDRRTKAAAATAEREAAERAEILAQGGNPDVVFRQRLARQIKEKERREHERRQSERQLEIVQKLVAEDTARRRGETRSEKKQKERDAIFDEEARRQRRAMQLRRWKGMYRTDSPTSEDGSSSLTSRDYEKGGVLASSSATIMRRVSGIDREESASPGKMSSPTLPNALSSVNISMHNAGVAESSAGAASDKDESSASSEDEVLAVPEFQGMWGDVIPSGRSNTRKAATMATHSGAAATEVTGHQQSKMEKEMMEKALIKQRASVVRKQVVAGKEFKGIAFSAKPDRVIFKDFEVGKVYKKKVTFTNISYSVNTFRPLDIPANLSEFVTLEHTPPGHLSAGLTCEVTVVFKPLVNEDLAGELPFLAETGPFTLAIECVTRKCHARLSANAIDFGDVCLGESVVRSIKILGEGALPTQYKIVRLNESDERIDTAAASLLTAADVATVAATPSAATVANSSDQPSVRTSIGTHKDLHSHALQPTSTEASPALSHAILVDGTETRKGSSENLASSSTSQPAEFGFGMIVRRGEAGEVGAYSQCNVEFAFAPMAVGPMEASFEVIFDDPSVEPQRLYLRGRGTDVPIFVERDSVDLRMCMFDRMYRDVLLINNRGSVAQRIRLNVPKELKGFLEITPKKTALVQAHSSLTAQLRFVPGPALFKHCREYIDSVTGQLDISLEICVHGQVLPVTYRLRAIVTPSDIEFDVPSIEFGPATVHESVRVPFVITNRSALPQKFGFVGLPKHAEVQPNDGFGVLLPYEHIHLDAIFSPMSAGEFSFPLRLRSAIGREFLLPCTGVGIHPPIRLSSSVIELLPTAIGDEMSESIYATNTDRSPQAFEFYVPEGAPVKVSPVVGILQPGQRTRVIVTFAPRLDFGDDDDVDGNDGEVGAAPSEHDEHSIAGDDLEESKSGRKSAVPGQKGTNSGNNNLAPVASGGALASASFAKRNQQAHRLAVNNSRPTSRAGDGRAGLSRQGSTKSSQVNLMRAAGVKGSSMQEEGSQMLFTQQDAETLERQLALRIQRQRAYTGSDGWFRLSCFVRPARHGVHAADSDGLPLADEPCDVRRTVYLDVHARSVPPPIVILSNGGEGSLEFGRIPLGQPAQLSIVIQNVSEEKQHVKSSILCTKGPFDIINALRCLEPGEKHDIYVSFVPQEEAEFFEVLEIRSHACRIPVRLSGVGVQPTVTIEPRNGLLDLGDVLVGDTAHKTFTVRNTSAFEVTYRIVLDGTTSARERANMGLSAESSEMLSGVDEIDIDFDTGLPLVRRSSMTPTANANNMNAFDIVPSEATLAAGESREVVVTFSPDHQSKYYRDTARVQVSSQQEQHVIHLQGRAWSRTMYVIGEDDVAANGDEIFAPANDAEKGQDSRVLLLVFKCNPAVHDGPIKRELEIGNLRGGAKKGPNGEYAFEALSADATAEGFSIEPLKGQIESGARKVVTIQFAPPRDKLYGRWVETTVPLSLKGDVTEQFLVVLRGYIII* # ORIGINAL: g5962.t1 original gene structure, not modified by PASA NODE_240_length_29855_cov_42.0385 AUGUSTUS gene 25434 26325 . - . ID=g5962;Name=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS mRNA 25434 26325 . - . ID=g5962.t1;Parent=g5962;Name=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 26238 26325 . - . ID=g5962.t1.exon1;Parent=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 26238 26325 . - 0 ID=cds.g5962.t1;Parent=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 25738 26044 . - . ID=g5962.t1.exon2;Parent=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 25738 26044 . - 2 ID=cds.g5962.t1;Parent=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS exon 25434 25491 . - . ID=g5962.t1.exon3;Parent=g5962.t1 NODE_240_length_29855_cov_42.0385 AUGUSTUS CDS 25434 25491 . - 1 ID=cds.g5962.t1;Parent=g5962.t1 #PROT g5962.t1 g5962 MHPEAEWWTDQRRLCVDSQYGECAGGVTWAAAWSVAGGVVCGTRFWSCLVYDAQWSGNLWTCTTGYDCGYAVAGAVAAACTCLLVSVCRLRVGDAVVRDKDWLVAPHVRNGMAEDGGTGCVGVVTGPVSQASSPNAEAVDYSVSPFNRSF* # PASA_UPDATE: g5957.t1, single gene model update, valid-1, status:[pasa:asmbl_4241,status:12],[pasa:asmbl_4243,status:12], valid-1 NODE_240_length_29855_cov_42.0385 . gene 77 5035 . + . ID=g5957;Name=g5957.t1 NODE_240_length_29855_cov_42.0385 . mRNA 77 5035 . + . ID=g5957.t1;Parent=g5957;Name=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 77 210 . + . ID=g5957.t1.exon1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 77 210 . + 0 ID=cds.g5957.t1;Parent=g5957.t1;5_prime_partial=true NODE_240_length_29855_cov_42.0385 . exon 493 700 . + . ID=g5957.t1.exon2;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 493 700 . + 1 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 810 995 . + . ID=g5957.t1.exon3;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 810 995 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 1255 1356 . + . ID=g5957.t1.exon4;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 1255 1356 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 1625 1696 . + . ID=g5957.t1.exon5;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 1625 1696 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 1952 2077 . + . ID=g5957.t1.exon6;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 1952 2077 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 2300 2392 . + . ID=g5957.t1.exon7;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 2300 2392 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 2680 2781 . + . ID=g5957.t1.exon8;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 2680 2781 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 3023 3109 . + . ID=g5957.t1.exon9;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 3023 3109 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 3245 3299 . + . ID=g5957.t1.exon10;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 3245 3299 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 3528 3688 . + . ID=g5957.t1.exon11;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 3528 3688 . + 2 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 3905 3991 . + . ID=g5957.t1.exon12;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 3905 3991 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . exon 4245 5035 . + . ID=g5957.t1.exon13;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . CDS 4245 4838 . + 0 ID=cds.g5957.t1;Parent=g5957.t1 NODE_240_length_29855_cov_42.0385 . three_prime_UTR 4839 5035 . + . ID=g5957.t1.utr3p1;Parent=g5957.t1 #PROT g5957.t1 g5957 RFAEGKSFKYQLWADFFRVCVSFLVQPPLQLEQFDETKRLLILNRHGDMRVGMGHTIKNMWEILGSNKIKFIPSLVGPLLEITLVPQLELRRTTLPIFVDIFECEFAATGSFGQVENETIDKLDIFVGAGKGDDEYRMMFGDILERKFLENPQLATSGVAFVRTVKSLLELLQQMRVLGEKEEYKDERSAVLLKLMRFFKESNREDMYYKYVERLCELHVRCGNFTEAAFCLQLHAEHLNWSNEKLRGYGKYPSQAHRQRKELIYTDIINYFDKGKAWENAITLCKELAEQYESELFDYAKMSQILQREARFFENIVSVPRYYSEYFRVGYYGKGFPASIRNKEFIFRGEELERIANFCERVQSQYPDAQILKTNTAPDDTVLNSEKQHIQIVKVDPVRTKERFKGRKVPEVIEKYFDVNDINTFTFARPFRKGAKSGNEFADLWTEKTFLVTEDSLPGILRRAEVLKTERVEISPIENACDAMVSKNRELISFINKYESMTGSFNVNPLTMAFNGVIDAAVNGGTEMYKKAFFVKSYLQQYPHHADFARQLKEAMDQQMQILEQGLVLHNKLVPDEMRALHTKMETFFADMKEKYHRPADGEDGKATTSTAAPSPAANALRDDVAEPGSPSSMRGSMAGEEARPSRPLRPSIKPKALKLLGEDAGNS* # PASA_UPDATE: g5961.t1, single gene model update, valid-1, status:[pasa:asmbl_4242,status:12], valid-1 NODE_240_length_29855_cov_42.0385 . gene 20478 25532 . + . ID=g5961;Name=g5961.t1 NODE_240_length_29855_cov_42.0385 . mRNA 20478 25532 . + . ID=g5961.t1;Parent=g5961;Name=g5961.t1 NODE_240_length_29855_cov_42.0385 . exon 20478 24012 . + . ID=g5961.t1.exon1;Parent=g5961.t1 NODE_240_length_29855_cov_42.0385 . CDS 20478 24012 . + 0 ID=cds.g5961.t1;Parent=g5961.t1 NODE_240_length_29855_cov_42.0385 . exon 24173 25532 . + . ID=g5961.t1.exon2;Parent=g5961.t1 NODE_240_length_29855_cov_42.0385 . CDS 24173 25356 . + 2 ID=cds.g5961.t1;Parent=g5961.t1 NODE_240_length_29855_cov_42.0385 . three_prime_UTR 25357 25532 . + . ID=g5961.t1.utr3p1;Parent=g5961.t1 #PROT g5961.t1 g5961 MASRTPPASKAVSRTAQTPPGVPSPASRALKTDVNDPDVDSTSDDSEETNDHAFEPSEDVVTSLLTDLLHLQVPEGAANLKGAIESLRERWNALTSKEFEQLGVLLVGNNRLGKTFLINMLLLLSCASASTYKSDAYNQARKELKKGLEACNDDEQETPSEQRAADEGSKNGGEVYRPMEVSKGTETDTATFNAAVARSHWQSTYSILREHAAAGFSDNFSEAVRISDSNMWGGFILPSAKEGDLNTTTAVHNRIRFGHTFHVLVVYQTMDFIRGVLTDIARDTLEGKSVAEASKSRWLWITGESLAALKSNPQGKEKLEGYVSSNGATIPIHEDIAAIAGCRRVYAGMGVNIEEDRWYVQGILRDINGKFDTKNKEDTRVQRYKRQRAILEAVFTYVPCSIVDHGMELLDAPGLDDCDPLSKALLRECEDYPSTRTMIMVIKSNLSANEALLEHIKKSTFIGRLMADPERHNLYILQYTENGVESPQVSNLVDDEKYTTLTETWAEREDSCLTTLREGLEQVVDAANGGSEMLDKVMSRVKFITGYQVLFASLLLNEQLRQEIAGKHSDASNPVDVKVLQRSRGHELCGVFEALGETQLREEVERSKDQLNVVHRIAKELQLKAQPKSYNLGPDGLKQAAAFKPKTRAKLETLQETIARALNGTDVSFQTKGLQSAGRLLDAAKKEWSSAAEKRITQQWNVAKQRLTAKNVHTVLARLSKGTNHVISIRDIVFSPNSTPVEALAAFNAAVVEILNTLKMQLIADFTHILPEIMPALFDEKRGVNNDAIALRDIFIRDVVEPALKAHLDVLLERGRAGERLTKEAQLRLWTGICNAAINTAVQRCAGKATKGRPIEAISADILPHLIETASSAFRQLVESIEDRLKTQAKAMWNDISAPRKHGNKTPIMRTLVQRFCELIWEQGQKAKGGQEIHNPVFAYARSVGFIVSQLESAIGRLAKPEKTLAECGEAFVSRHRINLMQIELSETIGKVSLHPYIPVQVAEPTEPSHQYAGPRKNQAIRAPNPADMAKTIASFKDALARNGLQVAGMGSQRLFEQLALAIFGQLKVKDAKAMQTFLHLKSLLFVLKVARVNRKEQEHAEKATGQKLEDWAARAWQSNALFDEYILPMVTEVTGGKFVINLWVGRANAPPRVFQYKPTSREGQPHKSVNIAIVATQEPDENDKTLPYKHTYVALLPREREKKTAAANPPHAPAPTHVQTEHDGLAVVVDDSAIMHPQFETLVPVLIELGKKRGKRIVIVVPVAAYDMIRRLARDPRSVGETPRKREKFLLDHKANVEVKQHTLEGSLLAMIKESDRKRQYELRVLDTVRKCANKRQRRTLFWTSNAEIIDLDRRTVQMYEAGWYTVKRTEDVKDLVGKGHLDALFPPPGDVSGMGVSPQKPQPHHPRAPPADKVQAGSATLHTRAVLKAASAQQDVGERKRPRGDDAGGEPPQKPQPQHPRAPPADKVQAGSATLHTRAVLKAASAQQDIGERKRPKEDDAGGEERGKRRTRQEDPSGRLKEETNRDAGNGTKNDGNGTNKDGNRTSKDRERRKREDDNGDGREGARRRP* # PASA_UPDATE: g5958.t1, single gene model update, valid-1, status:[pasa:asmbl_4248,status:12], valid-1 NODE_240_length_29855_cov_42.0385 . gene 5922 8714 . - . ID=g5958;Name=g5958.t1 NODE_240_length_29855_cov_42.0385 . mRNA 5922 8714 . - . ID=g5958.t1;Parent=g5958;Name=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 8586 8714 . - . ID=g5958.t1.exon1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 8586 8714 . - 0 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 8050 8175 . - . ID=g5958.t1.exon2;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 8050 8175 . - 0 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 7801 7908 . - . ID=g5958.t1.exon3;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 7801 7908 . - 0 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 7498 7607 . - . ID=g5958.t1.exon4;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 7498 7607 . - 0 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 6675 7301 . - . ID=g5958.t1.exon5;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 6675 7301 . - 1 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 6244 6383 . - . ID=g5958.t1.exon6;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 6244 6383 . - 1 ID=cds.g5958.t1;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . exon 5922 5974 . - . ID=g5958.t1.exon7;Parent=g5958.t1 NODE_240_length_29855_cov_42.0385 . CDS 5922 5974 . - 2 ID=cds.g5958.t1;Parent=g5958.t1 #PROT g5958.t1 g5958 MAAATLESKAIWDDGEEALDEEVLRMSTEEIISRTRLLDNDIKIMKNENTRLQHEQGAMKEKIKDNQDKIKMNKQLPYLVGNIVELLDIDPNDQAEEDGANVDLDSQRKGKCAVIKTSTRQTIFLPVIGLVDSTKLRPGDLVGVNKDSYLVLDTLPAEYDSRVKAMEVDERPTEEYTDIGGLDKQIHELVEAIVLPMTHAERFRNLGIKPPKGCLLYGPPGTGKTLMARACAAQTQSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFGSDDRIKVIAATNRIDILDPALLRSGRLDRKIEFPLPTEEARARIMQIHSRKMNFSPDVNFEELARCTDDFNGAQLKAVCVEAGMIALRREATELTHEDYMEGIQEVQAKKKANLNYYA* # PASA_UPDATE: g5959.t1, single gene model update, valid-1, status:[pasa:asmbl_4249,status:3], valid-1 NODE_240_length_29855_cov_42.0385 . gene 9138 11830 . - . ID=g5959;Name=g5959.t1 NODE_240_length_29855_cov_42.0385 . mRNA 9138 11830 . - . ID=g5959.t1;Parent=g5959;Name=g5959.t1 NODE_240_length_29855_cov_42.0385 . five_prime_UTR 11632 11830 . - . ID=g5959.t1.utr5p1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . exon 11578 11830 . - . ID=g5959.t1.exon1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . CDS 11578 11631 . - 0 ID=cds.g5959.t1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . exon 11253 11408 . - . ID=g5959.t1.exon2;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . CDS 11253 11408 . - 0 ID=cds.g5959.t1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . exon 9837 11055 . - . ID=g5959.t1.exon3;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . CDS 9837 11055 . - 0 ID=cds.g5959.t1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . exon 9568 9677 . - . ID=g5959.t1.exon4;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . CDS 9568 9677 . - 2 ID=cds.g5959.t1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . exon 9138 9471 . - . ID=g5959.t1.exon5;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . CDS 9172 9471 . - 0 ID=cds.g5959.t1;Parent=g5959.t1 NODE_240_length_29855_cov_42.0385 . three_prime_UTR 9138 9171 . - . ID=g5959.t1.utr3p1;Parent=g5959.t1 #PROT g5959.t1 g5959 MADFTTEQLAEFREIFNEFDIDKNGSITSSELGTVLTKLGENVPGFKLREMIAEIDKDNNGTVEWNEFLAMLANVRKGKEAGFNKVVKKVEQVVKVGGSSEASAAGTTHSFSEDEKVAFVDWINDVLGPDEDLKGFKLVPVSEDGDALFKAVNNGILMCKLINSAVSDTVDERAINKKKLNTYTIHENQTLSLNSAKAIGCSVVNIGAQDLIDGKSHLVLGLIWQIIRIGLFARINLQSCPGLARLLEGSETLDDLMALPADQILIRWVNFHLKEAGSARRIGNFSKDISDSEAYTILLKQIAPKNLGVDTSPLNEQDLTKRADKMLKNAEKMDCRKFVRPRDIVKGNPKLNLAFVANLFNKFPALTPVEEVEITEETREERTFRNWMNSLGVNPFVNNLYQDLRDGIILIQLFDKVTPGCVNWSKVNQPPYKKIGGNMKKLENCNYALELGKEHKFSLVGIDGKDVFDGNKMLTLAIVWQLMRAYTLAILNRLSAGGARISDAQIVEWVNERLGSNGKSTSIRSFKDSSISTSHPVIDLIDAIRPGSIDYSTVTTGENDKDKLNNAKYAVSMGRKIGAGIYALPEDLVEVKDKMVLTVFACLMAASFEQKQ* # PASA_UPDATE: g5496.t1, single gene model update, valid-1, status:[pasa:asmbl_1672,status:12], valid-1 NODE_1461_length_11142_cov_50.9274 . gene 5032 10152 . - . ID=g5496;Name=g5496.t1 NODE_1461_length_11142_cov_50.9274 . mRNA 5032 10152 . - . ID=g5496.t1;Parent=g5496;Name=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 10052 10152 . - . ID=g5496.t1.exon1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 10052 10152 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 9773 9833 . - . ID=g5496.t1.exon2;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 9773 9833 . - 1 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 9494 9542 . - . ID=g5496.t1.exon3;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 9494 9542 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 8808 8956 . - . ID=g5496.t1.exon4;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 8808 8956 . - 2 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 8362 8514 . - . ID=g5496.t1.exon5;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 8362 8514 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 7984 8056 . - . ID=g5496.t1.exon6;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 7984 8056 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 7684 7751 . - . ID=g5496.t1.exon7;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 7684 7751 . - 2 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 7408 7435 . - . ID=g5496.t1.exon8;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 7408 7435 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 6768 6925 . - . ID=g5496.t1.exon9;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 6768 6925 . - 2 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 6461 6580 . - . ID=g5496.t1.exon10;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 6461 6580 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 6005 6157 . - . ID=g5496.t1.exon11;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 6005 6157 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . exon 5032 5571 . - . ID=g5496.t1.exon12;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . CDS 5488 5571 . - 0 ID=cds.g5496.t1;Parent=g5496.t1 NODE_1461_length_11142_cov_50.9274 . three_prime_UTR 5032 5487 . - . ID=g5496.t1.utr3p1;Parent=g5496.t1 #PROT g5496.t1 g5496 MIAAFNKSCLSYVPSKGTVGASGDLAPLSHLALGLIGIGKMWDPTDKAYGNAAEVLAKHGLDRVVLGAKEGLAMINGTQFMAALGCEALVRATMAAKQADVIAALSLEVLMGTFKAFDSRIHAARPHPGQVECASRMRALLHTSSHPSEIYTSHKSCSRVQDSYTLRCIPQVHGIAADTLDFVRKIVTTEINSGTDNPMVFSDTRETISGGNFHGEYIAKACDFLAIGAHEIASISERRIERLLNHSLSGLPAFLVKEGGLHSGFMIAHCTAASLVSENKVLCHPSSVDSLSTSAAKEDHVSMGGFAARKSLEVVSHVETVIAIELLCACQALEFHRPMKTTPALEAVHAVVRSVVAPYDKDRYMAPDIEAAVRLVREGRIWEAVKPHIDLNLAHLTI* # ORIGINAL: g5495.t1 original gene structure, not modified by PASA NODE_1461_length_11142_cov_50.9274 AUGUSTUS gene 1967 4320 . + . ID=g5495;Name=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS mRNA 1967 4320 . + . ID=g5495.t1;Parent=g5495;Name=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS exon 1967 2317 . + . ID=g5495.t1.exon1;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS CDS 1967 2317 . + 0 ID=cds.g5495.t1;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS exon 2549 2686 . + . ID=g5495.t1.exon2;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS CDS 2549 2686 . + 0 ID=cds.g5495.t1;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS exon 2866 3143 . + . ID=g5495.t1.exon3;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS CDS 2866 3143 . + 0 ID=cds.g5495.t1;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS exon 3261 4320 . + . ID=g5495.t1.exon4;Parent=g5495.t1 NODE_1461_length_11142_cov_50.9274 AUGUSTUS CDS 3261 4320 . + 1 ID=cds.g5495.t1;Parent=g5495.t1 #PROT g5495.t1 g5495 MGTADASRLARRPPHSGGTNATATSEHASSKRAKLTSARALPQHLLHEIDGARVLDVKRGGAVSDDVASEATGSVPTTPRSALKKREHTNSCPSTAEKRQSVKFGPVDVQHYPTVLGGSCSVPSCGGGPLGLGWEPEDRMMFESIDKYEHVRGYRCNLKFYSPLTTTDRMMILTRNDVSESDLHKEDQNLKSVRRIRAKVGCACKPKYVPEAYAAVGRSDDVAAPAVPDVCCSADCVCHDNGIPCHEDACGCMGLGCENPSGCHTFDPTTMQELWNKQLPLLNSAAKKAHAAAIARRLEFTEVPSGQVPTAHCGASTAGVVAGAIGGVVSSMTQAVSAAIAAVAAESAKYTMSRLQQPQPQPTQDHARGDTEQQPQHRHCDQENKQQQQQQQQQYYHHHQQRVSPNQIQGQGHATAGVFQHLQQQQELQQQQQQQQQQKKLSDDLLRRGPRRACRDAAMRAMADAKALEQRRMLKRAAAVKASRDRAESSSSSSASELDEKGVRCKRKLFSESSEDSEGTGDDSAKVPSVVRNNVDAAQKARRAGVASSAVAGGRVSKAKGRTSTRAAAVLPTSAAVGGKLALSKKRELAGAIAVSAAHGVQRKSARR* # ORIGINAL: g2326.t1 original gene structure, not modified by PASA NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS gene 869 2497 . - . ID=g2326;Name=g2326.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS mRNA 869 2497 . - . ID=g2326.t1;Parent=g2326;Name=g2326.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS exon 869 2497 . - . ID=g2326.t1.exon1;Parent=g2326.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS CDS 869 2497 . - 0 ID=cds.g2326.t1;Parent=g2326.t1 #PROT g2326.t1 g2326 MAPAGVFSAIDIGLSNRSLALITVSLVTVIKSTTLVFLLIFSIAFRLERFRWPLLLVVISIAAGAALFSYDNTSSEQPIVKTIAAVIAPSPTASVYPSVDGGLATASGTRALGCILALAAAVVGGLRWVLVQAGMQRRGAVAVANVPPKTSHSPPSNTNSSRAGDAHNAHSDEFVVGPVDSAAGGESEGETDDAQQRIATEDAGDASQAHSHKMHPMDGMFYISPTAFLTLLPFAAALEGSQFVHSSVLFGASNGGTLLMSVLIIVSAANIAFFMTLAEYLLVQRTSSLSFAVAGMVKEVVTILLSVVIFGDRHSPMNYAGLAISLCGIGMYNYIKYTAMRDPTAFTAASLAPPNNSSIHRSNGDGEGASHDGDAGRNSLQRGEWRGRMHSATADLPQKSTGVGAFFRTLGQKIRSALSRGRAYRTLPSMEDVFYDSNEDGDIVFDVNGAENFGMVDLASTERTRDGAPPRSGEGGRGTFKGGKGGQGAPAPAMVAMGTAVAASDDVSCSDVDDDEETVLWSHGEVTSAAPRPASARTFARR* # ORIGINAL: g2325.t1 original gene structure, not modified by PASA NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS gene 200 438 . + . ID=g2325;Name=g2325.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS mRNA 200 438 . + . ID=g2325.t1;Parent=g2325;Name=g2325.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS exon 200 438 . + . ID=g2325.t1.exon1;Parent=g2325.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS CDS 200 438 . + 2 ID=cds.g2325.t1;Parent=g2325.t1 #PROT g2325.t1 g2325 IVLTEIAARANPYGEEVYQRMSLKAFLDALVNDPTVRPSYQVDGIPSEFAEIVESCLRRDPLRRPTFAAIVDLLEAWQ* # ORIGINAL: g2327.t1 original gene structure, not modified by PASA NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS gene 3147 9915 . - . ID=g2327;Name=g2327.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS mRNA 3147 9915 . - . ID=g2327.t1;Parent=g2327;Name=g2327.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS exon 3147 9915 . - . ID=g2327.t1.exon1;Parent=g2327.t1 NODE_1664_length_9915_cov_47.6359_potentialcontaminant AUGUSTUS CDS 3147 9915 . - 1 ID=cds.g2327.t1;Parent=g2327.t1 #PROT g2327.t1 g2327 KFKITAADGKTEIAGDVLVATDKFTVASASGNTAIKGDVAVNTDKFKIMAADGKTEIAGDVAVASDKFTIASATGNTAIKGDVAVNTDKFTVAAASGNTLIAGTASITGNVAVNTDKFKITAADGKTDIAGDVAVASDKFTIASASGNTAIKGDVAVNTDKFTVAAASGNTLIAGTASITGNVAVNSDKFKITAADGKTEIAGDVAVASDKFTIASATGNTAIKGDVAVNTDKFTVAAASGNTVIAGTASITGNVAVNTDKFKITAADGKTEIAGDVAVSSDKFTIASATGNTAIKGDVAVNTDKFNIAASSGNTAIAGTASITGNVAVNTDKFTIAASSGNTVIAGTAAIAGDVSVNSDKFTIASATGNTAIKGDVAVNTDKFTVAAASGNTLIAGTASITGNVAVNTDKFKITAADGKTDIAGDVAVASDKFTIASASGNTAIKGDVAVNTDKFTVAAASGNTVIAGTASITGNVAVNTDKFKITAADGKTEIAGDVTVASDKFTIASATFTVAASSGNTAIAGTASITGNVAVNTDKFTIAASSGNTVIAGTAAIAGDVSVNSDKFTIASATGNTAIKGDVAVNTDKFTIAAASGNTLIAGTASITGNVAVNTDKFKITAADGKTEIAGDVAIASDKFTIASATGNTAIKGDVAVNADKFTVAASSGNTAIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAIAGDVSVNSDKFTIASATGNTAIKGDVAVNTDKFTVAAASGNTLIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAIAGDVSVNSDKFTIASASGNTAIKGDVAVNTDKFTVAASSGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAIAGDVSVNSDKFTVAAASGNTVIAGTASITGNVAVSTDKFKITAADGKTEIAGDVAVASDKFTIASATGNTAIKGDVAVNTDKFTVAAASGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAIAGDVSVNSDKFTIASATGNTAIKGDVAVNTDKFIVAASSGNTAIAGTASITGNVAVNTDKFTVAASSGNTAIAGTAAIAGDVSVNTDKFTIAASSGNTVIAGTAAIAGDVAVNSDKFTVASATGNTAIKGDVAVNTDKFTVAAASGNTAIAGTASITGNVAVNTDKFTVAASSGNTAIAGTASITGNVAVNTDKFTVAASSGNTAIAGTAAIAGDVSVNTDKFTVAASSGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTVAIAGDVSVNSEKFTIASATGNTAIKGDVAVNTDKFTVAASSGNIVIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAITGNVAVNTDKFTITATSGNTVIAGTAAIAGDVSVNSDKFTIASATGNTAIKGDVAVNTDKFTVAASSGNTAIAGTASITGNVAVNTDKFTVAASSGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTVAIAGDVSVNSDKFTVASATGNTAIKGDVAVNTDKFIVAAASGNTAIAGTASITGNVAINTDKFTITAASGNTAIAGTAAIAGDVSVNTNKFTVAASSGNTVIAGTASITGNVAVNTDKFTIAASSGNTVIAGTAAIAGDVSVNSDKFTVASATGNTAIKGDVAVNIDKFTVAASSGNTAIAGTASITGNVAVNTDKFTITAASGNTAIAGTASIAGDVSVNTDKFTITAASGNTVIAGTASITGNVAVNTDKFTVAASSGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTASITGDVSVNTNKFTVAASSGNTVIAGTASITGNVAVNTDKFTITAASGNTAIAGTAAIAGDVSVNSDKFTVASATGNTAIKGDVAVNTDKFTVAASSGNTAIAGTASITGNVAVNTDKFTITAASGNTAIAGTASITGDVSVNTNKFTVAASSGNTVIAGTASINGNVAVNTDKFTITAASGNTAIAGTVAIAGDVSVNSDKFTVASATGNTAIKGDVAVNTDKFTVAASSGNTAIAGTASITGNVAVNTDKFTITAASGNTAIAGTASITGDVSVNTDKFTITAASGNTVIAGTASITGNVAVNTDKFTVAASSGNTVIAGTASITGNVAVNTDKFTVAASSGNTATAGGLYAAKTAFFDAHAYGASTETDGDTSVTLTAADLLGGLVVIAGTAGSKITVTLPGASALATAIGESGQTAGAGDWVALSICTEDIQFIVVATGSGGSVPSQHTWDDHGLGDPDNTSFWTGCQDYILRLTSTSAYEVYAA* # PASA_UPDATE: g1410.t1, single gene model update, valid-1, status:[pasa:asmbl_4181,status:3], valid-1 NODE_237_length_29967_cov_43.4126 . gene 10076 15693 . - . ID=g1410;Name=g1410.t1 NODE_237_length_29967_cov_43.4126 . mRNA 10076 15693 . - . ID=g1410.t1;Parent=g1410;Name=g1410.t1 NODE_237_length_29967_cov_43.4126 . five_prime_UTR 15321 15693 . - . ID=g1410.t1.utr5p1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 14622 15693 . - . ID=g1410.t1.exon1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 14622 15320 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 14207 14377 . - . ID=g1410.t1.exon2;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 14207 14377 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 13708 13965 . - . ID=g1410.t1.exon3;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 13708 13965 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 13259 13512 . - . ID=g1410.t1.exon4;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 13259 13512 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 12761 13084 . - . ID=g1410.t1.exon5;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 12761 13084 . - 1 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 12428 12583 . - . ID=g1410.t1.exon6;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 12428 12583 . - 1 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 12144 12225 . - . ID=g1410.t1.exon7;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 12144 12225 . - 1 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 11716 11832 . - . ID=g1410.t1.exon8;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 11716 11832 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 11336 11595 . - . ID=g1410.t1.exon9;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 11336 11595 . - 0 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . exon 10076 11200 . - . ID=g1410.t1.exon10;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . CDS 10774 11200 . - 1 ID=cds.g1410.t1;Parent=g1410.t1 NODE_237_length_29967_cov_43.4126 . three_prime_UTR 10076 10773 . - . ID=g1410.t1.utr3p1;Parent=g1410.t1 #PROT g1410.t1 g1410 MSEMQNSVSVEHSPIVSSQGSIDAGQNELEALADNFMFGSAVLIARSPQPQRASSSAAASSDVHTLTRVSISRPMTRSPSLSQAPASTTRQMIDVHTALGAPRLRRSSKVEETAEVASSLRRQATESHGGHSTAAMPDSNARETASHNRNDGSKEDATRHGDGASSRTTSPPQRANDEGVVEGGEEEGSGIRWQTSTLIGQGAFGKVYLGLNLETGELMAVKKVPLTIEYSGELRAMEKEINLLSTLHHDNIVHYMGTARDDQCLNIFLEYVPGGSIASLVAKFGSFTEQVMAVYTRQILMGLAYLHSNGIVHLDIKGANILVDNNGTIKLADFGTAGRLAMTMSINSGVGHNSNGGGNPLRGTPYWMAPEVIKQKDYGKPADIWSLGCTVLEMATGKPPWFKFKDYISAIFHIASSRESPEIPESLSKEARDFLRVCFQRNPADRPTAAECLNHEFLAESRARRGLSRSTSTSSPVTPAAVVALQSSGSTTPTFAGGRSPQPTRAAASSLSSASASSASPMLTRHSSLKQRSVRSADGPAQTRGAVHHTVEDPNMQRLSYPGSSADDVDKSSGLLRRLSAPAYRSNASNPSVVVDGAGGQQSVVGTRSPQTRSPATAVRRQRPTSDATGLLQANRMTWHEGDGARAQALAQTQGDPSRWLGTALQPMMSESEYEHGEVEDVPNTDPLPVLHHSLSSPMPQRSASAMARIATTASGHTSPLVRTPTVMEESHNTHPLLVVDAASGYLCTSESISDLQEAGSGRRSAPISPLTSRANDRTTSHLEPGSAQSKGSVLGLSLYIPQQNTHRIGGSGSGSASPSFNTGGRASPYHNAPVSASVLMNPPSITSNASMPMSISLPGTPIFESKTFESVRDVRATLTPNTIAEQPGAPTGRRQRSISSPLSPNSLGNLPPIF* # ORIGINAL: g1413.t1 original gene structure, not modified by PASA NODE_237_length_29967_cov_43.4126 AUGUSTUS gene 20749 23357 . + . ID=g1413;Name=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS mRNA 20749 23357 . + . ID=g1413.t1;Parent=g1413;Name=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 20749 21052 . + . ID=g1413.t1.exon1;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 20749 21052 . + 0 ID=cds.g1413.t1;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 21248 21607 . + . ID=g1413.t1.exon2;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 21248 21607 . + 2 ID=cds.g1413.t1;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 21865 22263 . + . ID=g1413.t1.exon3;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 21865 22263 . + 2 ID=cds.g1413.t1;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 22571 22869 . + . ID=g1413.t1.exon4;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 22571 22869 . + 2 ID=cds.g1413.t1;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 23079 23357 . + . ID=g1413.t1.exon5;Parent=g1413.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 23079 23357 . + 0 ID=cds.g1413.t1;Parent=g1413.t1 #PROT g1413.t1 g1413 MAYMQMYETELLLRNSASTGDWTESFESKEITGDAHAHPPCNGKTSSAARRPARYAPVSCTTCKNAHKACSGGRPCARCIRLGISDTCVDVTHQKRGRPKKMKDGSGTLKSSRTNVALVNDFAALGEDLQLVPLGPQTPPRAVGSDFNPLSLEHLLNASGWETLMSEIATSSLHANKPFQGPYFGASNLVAHQDDFVNGQYSFARDFELGLVPADAGFGSIEAVHNYPRYIEAPSSPDHLSFNSASPTSSSDSGVDVGDLFALPADRSSGGSVPSPAGDSSLDLPYGGNGIGFEGSRIESLSGHSVPITEDLTIHFDLLDLSSPTAGKVVVSTKEIGSRDIMIFGTQDPPLVPGGTWALLANVDWRRSKNPVVLTTLQSAVGCKSLKAALLSEQDPTARAALYNLMTKSLETTQEQWEKLRAAAFRKVCIVDYVQWPLENQPMCAWGMDAVLFKVNPLLCELLELSPEEIIMKVKFAFNLVAPEDVSACMILHVGAVLSGLDIYESTYAMLGKNGVRIRRRVRTTVARNSSGQYLYSYATSMSTDP* # PASA_UPDATE: g1408.t1, single gene model update, valid-1, status:[pasa:asmbl_4177,status:12], valid-1 NODE_237_length_29967_cov_43.4126 . gene 6755 7434 . - . ID=g1408;Name=g1408.t1 NODE_237_length_29967_cov_43.4126 . mRNA 6755 7434 . - . ID=g1408.t1;Parent=g1408;Name=g1408.t1 NODE_237_length_29967_cov_43.4126 . exon 6755 7434 . - . ID=g1408.t1.exon1;Parent=g1408.t1 NODE_237_length_29967_cov_43.4126 . CDS 6781 7434 . - 0 ID=cds.g1408.t1;Parent=g1408.t1 NODE_237_length_29967_cov_43.4126 . three_prime_UTR 6755 6780 . - . ID=g1408.t1.utr3p1;Parent=g1408.t1 #PROT g1408.t1 g1408 MCNVVFHGDCVVGNFVPQVCSQGTAPHSFGGQPHLHDALLNWELTTSADDETQYDAVPNVFPERLLDACFRHCSEVASGRKFSPLHGIYMLYDRVYNQSSVPALVGGMGANVFSPSQHAQLKARLGGLLEGVKKAAQPQFTDGLVRKLVRFSDDYWVTKFSTYLDPVLEPEAVAFILQRCGVPFGQAYGAVHLRIPSEAARSAESLAQAKTSLVDLL* # ORIGINAL: g1415.t1 original gene structure, not modified by PASA NODE_237_length_29967_cov_43.4126 AUGUSTUS gene 26566 29862 . + . ID=g1415;Name=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS mRNA 26566 29862 . + . ID=g1415.t1;Parent=g1415;Name=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 26566 26605 . + . ID=g1415.t1.exon1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 26566 26605 . + 0 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 26833 26936 . + . ID=g1415.t1.exon2;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 26833 26936 . + 2 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 27042 27120 . + . ID=g1415.t1.exon3;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 27042 27120 . + 0 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 27309 27370 . + . ID=g1415.t1.exon4;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 27309 27370 . + 2 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 27752 27884 . + . ID=g1415.t1.exon5;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 27752 27884 . + 0 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 28223 28687 . + . ID=g1415.t1.exon6;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 28223 28687 . + 2 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 28959 29023 . + . ID=g1415.t1.exon7;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 28959 29023 . + 2 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 29340 29418 . + . ID=g1415.t1.exon8;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 29340 29418 . + 0 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 29636 29768 . + . ID=g1415.t1.exon9;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 29636 29768 . + 2 ID=cds.g1415.t1;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 29850 29862 . + . ID=g1415.t1.exon10;Parent=g1415.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 29850 29862 . + 1 ID=cds.g1415.t1;Parent=g1415.t1 #PROT g1415.t1 g1415 MVSDQNTVSEYSVRHRNKDRGCWTLLTVALAAIIVFGAIDGVDAYDAVAPNGLYWSLFKAKWELRPPSGVVDVQSALIVKIGSRRTGTPGVLSVESDDGEGDEDYGGIEGDSDSVDGPMSLANDECMLLITARLDGTPLLNQLSTEQEFAGFMSLSESCAPANADAHFSVLRDPADNNAVHYTNAILATSAPEFSVVSPYVTVPSGVLDPSAWTMAAFSFNGTTFTNGRLAARTMNYALYVCALVGVDILLLAHQSERTRTRALASKAATLTAIMCAQADLFASVGHIVGAFVFEPVFYTLIVVTIVKFVFFSIFEMRYLGNLLKAQSVVSQVVPWTFYFAFYASAVAGGAFIRYVSKDAAVALLCSFWVPQIVHNARHYVRCGVAQFGT* # ORIGINAL: g1406.t1 original gene structure, not modified by PASA NODE_237_length_29967_cov_43.4126 AUGUSTUS gene 358 2642 . - . ID=g1406;Name=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS mRNA 358 2642 . - . ID=g1406.t1;Parent=g1406;Name=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 2577 2642 . - . ID=g1406.t1.exon1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 2577 2642 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 2382 2447 . - . ID=g1406.t1.exon2;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 2382 2447 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 2133 2265 . - . ID=g1406.t1.exon3;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 2133 2265 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 1907 2001 . - . ID=g1406.t1.exon4;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 1907 2001 . - 2 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 1653 1733 . - . ID=g1406.t1.exon5;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 1653 1733 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 1391 1457 . - . ID=g1406.t1.exon6;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 1391 1457 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 926 1070 . - . ID=g1406.t1.exon7;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 926 1070 . - 2 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 562 676 . - . ID=g1406.t1.exon8;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 562 676 . - 1 ID=cds.g1406.t1;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 358 399 . - . ID=g1406.t1.exon9;Parent=g1406.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 358 399 . - 0 ID=cds.g1406.t1;Parent=g1406.t1 #PROT g1406.t1 g1406 MADVCGRLVHKLRPRKPGGPVESLDYEIINNQEYRESIKARTRKTVKFKAVIRWFMFVAIGLIVACIYKAIHVVTEHLADAKFDLLAEYLEHGQSGVAWIVNTIIMVGLVLIGVGVVLYQPAAGGSGIPEVLAFLNGAAPPRAMDFRTLVCKIIGITCAVGAGLALGPEGPMIHIGAMVGVRLVRDLSKLNCFHALSDEKSRSKTLRNDRDERIFIACGSAAGISAAFRAPIGGTLFVLEEAISFFNSKLIFRTYVTCAVAYYLLGFMSQ # PASA_UPDATE: g1407.t1, single gene model update, valid-1, status:[pasa:asmbl_4179,status:3], valid-1 NODE_237_length_29967_cov_43.4126 . gene 3210 5390 . - . ID=g1407;Name=g1407.t1 NODE_237_length_29967_cov_43.4126 . mRNA 3210 5390 . - . ID=g1407.t1;Parent=g1407;Name=g1407.t1 NODE_237_length_29967_cov_43.4126 . five_prime_UTR 5328 5390 . - . ID=g1407.t1.utr5p1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 5234 5390 . - . ID=g1407.t1.exon1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 5234 5327 . - 0 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 4933 5116 . - . ID=g1407.t1.exon2;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 4933 5116 . - 2 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 4732 4756 . - . ID=g1407.t1.exon3;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 4732 4756 . - 1 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 4546 4630 . - . ID=g1407.t1.exon4;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 4546 4630 . - 0 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 4158 4303 . - . ID=g1407.t1.exon5;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 4158 4303 . - 2 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 3451 3809 . - . ID=g1407.t1.exon6;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 3451 3809 . - 0 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . exon 3210 3331 . - . ID=g1407.t1.exon7;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . CDS 3268 3331 . - 1 ID=cds.g1407.t1;Parent=g1407.t1 NODE_237_length_29967_cov_43.4126 . three_prime_UTR 3210 3267 . - . ID=g1407.t1.utr3p1;Parent=g1407.t1 #PROT g1407.t1 g1407 MKVSNCIAAVLVACCLVQLASGKVLPIAIMHGISASASSLDFMAKFIAEKVPGIYVKNLEVGNGDVDSFFMPMEKQVDSLCRQLKEDTNLAGGFNLLGVSQGGLVARGYLERCNDPPVHTFISWVSPQAGQYGVPIVNDACNKVTKNATYCELLDDIFNKISYAGALQAHVTFAEYWKDPFALTEYATDSRYLADINNERGLACPDDDTACFRGSVNATYKNNMLALENFLLIHSAVDDTLVPMATSAWGFYAPGDLTQIIPLEDSYIYRNDVNGLRTLDATGRLRRFTTMCAHADYSSECFQKYFGDFVVPFLSKEV* # ORIGINAL: g1409.t1 original gene structure, not modified by PASA NODE_237_length_29967_cov_43.4126 AUGUSTUS gene 7646 8608 . - . ID=g1409;Name=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS mRNA 7646 8608 . - . ID=g1409.t1;Parent=g1409;Name=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 8434 8608 . - . ID=g1409.t1.exon1;Parent=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 8434 8608 . - 0 ID=cds.g1409.t1;Parent=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 8280 8357 . - . ID=g1409.t1.exon2;Parent=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 8280 8357 . - 2 ID=cds.g1409.t1;Parent=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 7646 7869 . - . ID=g1409.t1.exon3;Parent=g1409.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 7646 7869 . - 2 ID=cds.g1409.t1;Parent=g1409.t1 #PROT g1409.t1 g1409 MHRSRTTHEPHKTTVSASAQRTVLLVAPPHRLGHYVDRKRTVDEAYGDAKKKVFASVIEKNAYSDHRDYLIVDKTGPKLSDILENGDVIEHGSNIKVRLDHDMAAFCKVVGFEGFENNSGKHVKRHTVDSREVSLKVEWIYTREDREQFVEDGNTLFP* # ORIGINAL: g1411.t1 original gene structure, not modified by PASA NODE_237_length_29967_cov_43.4126 AUGUSTUS gene 16586 18503 . + . ID=g1411;Name=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS mRNA 16586 18503 . + . ID=g1411.t1;Parent=g1411;Name=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 16586 16639 . + . ID=g1411.t1.exon1;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 16586 16639 . + 0 ID=cds.g1411.t1;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 16822 17535 . + . ID=g1411.t1.exon2;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 16822 17535 . + 0 ID=cds.g1411.t1;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 17646 17820 . + . ID=g1411.t1.exon3;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 17646 17820 . + 0 ID=cds.g1411.t1;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 18096 18197 . + . ID=g1411.t1.exon4;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 18096 18197 . + 2 ID=cds.g1411.t1;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS exon 18400 18503 . + . ID=g1411.t1.exon5;Parent=g1411.t1 NODE_237_length_29967_cov_43.4126 AUGUSTUS CDS 18400 18503 . + 2 ID=cds.g1411.t1;Parent=g1411.t1 #PROT g1411.t1 g1411 MDLDLHSTIANQPIVIDNGSGVIKAGFAGDQVPKLIYPTYVGRPKHKRVMAGAIEGDHFVGSRAEEYRGLLKLRYPMEHGIVNDWGDMERLWQHVYSPECLHTAPEEHPVLLTEAPLNPRRNRERSAEIFFESFGVPALFVSIQAVLALYASGRTTGVVLDSGDGVTHAVPIYEGFAMPITISRVDLAGRDVTRYLQLQLRREGYAFKTSAEMETVRLIKEKVCQVSSSAAAAERMSGPDVLESVPFTLPDGTVIQVGQSRFRAPEVLFQPEMIGEECQGVHECLSDAIRKADLDLRKTLYSSIVLSGGTTLFKGFGERLLSELKQAAPADAKIKIMAPQERKYLTWIGGSILASLGSFRKMWVTKAEYEEEGAEVIHRKTF* # PASA_UPDATE: g1414.t1, single gene model update, valid-1, status:[pasa:asmbl_4183,status:3], valid-1 NODE_237_length_29967_cov_43.4126 . gene 23644 25768 . - . ID=g1414;Name=g1414.t1 NODE_237_length_29967_cov_43.4126 . mRNA 23644 25768 . - . ID=g1414.t1;Parent=g1414;Name=g1414.t1 NODE_237_length_29967_cov_43.4126 . five_prime_UTR 25639 25768 . - . ID=g1414.t1.utr5p1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . exon 25558 25768 . - . ID=g1414.t1.exon1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . CDS 25558 25638 . - 0 ID=cds.g1414.t1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . exon 24724 25353 . - . ID=g1414.t1.exon2;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . CDS 24724 25353 . - 0 ID=cds.g1414.t1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . exon 24012 24467 . - . ID=g1414.t1.exon3;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . CDS 24012 24467 . - 0 ID=cds.g1414.t1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . exon 23644 23856 . - . ID=g1414.t1.exon4;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . CDS 23788 23856 . - 0 ID=cds.g1414.t1;Parent=g1414.t1 NODE_237_length_29967_cov_43.4126 . three_prime_UTR 23644 23787 . - . ID=g1414.t1.utr3p1;Parent=g1414.t1 #PROT g1414.t1 g1414 MSSVQVVLAVVAMGAFACLVSSETITFETMNLGLVEADFVPFYALRKMHVVEELLKSDADVLCLQEVWEDPDQRMIAAGLREKFPHIHTKVDLNGPSTSRAPVCSPSQGEALAAVSACVTEKCDTTQPTGIVFGCIFARCFAEFYPLYRTDCHNCLSSNLPRGVGEAGQICMTDTSRRYDSTFGVMLLSKRPMSQLSYEEIPAALLRRGFLQANIEGVGKVTCTHISAALPSLPYTKGSPIGQYDGWEDENKEHIKLIDKAIGSRGILLGDLNMGPAFPSLGLQGELANNWPVIESLGYVSGYVKSGNVQCSWCYQENFLVSVTGDVSTILIDHVLTKNRHSLKYVSSKIVHNMPVTTVPGFGIPITLSDHFGLSSTYEIDSTGHGQWMEAMDEWKESFAAWKAETAACGK* # PASA_UPDATE: g1412.t1, single gene model update, valid-1, status:[pasa:asmbl_4182,status:12], valid-1 NODE_237_length_29967_cov_43.4126 . gene 18527 20136 . - . ID=g1412;Name=g1412.t1 NODE_237_length_29967_cov_43.4126 . mRNA 18527 20136 . - . ID=g1412.t1;Parent=g1412;Name=g1412.t1 NODE_237_length_29967_cov_43.4126 . exon 19070 20136 . - . ID=g1412.t1.exon1;Parent=g1412.t1 NODE_237_length_29967_cov_43.4126 . CDS 19070 20136 . - 0 ID=cds.g1412.t1;Parent=g1412.t1 NODE_237_length_29967_cov_43.4126 . exon 18527 18952 . - . ID=g1412.t1.exon2;Parent=g1412.t1 NODE_237_length_29967_cov_43.4126 . CDS 18685 18952 . - 1 ID=cds.g1412.t1;Parent=g1412.t1 NODE_237_length_29967_cov_43.4126 . three_prime_UTR 18527 18684 . - . ID=g1412.t1.utr3p1;Parent=g1412.t1 #PROT g1412.t1 g1412 MASPLRPPPLTQRRTYRALYPFTASDATELSCSTGDIFTEVSPPQSEWLQLRCERTGREGLLPGNYLEQIASPAPANSVASTSPGGSGLAYLRLKHTLTREFWCAHWGADTPRADWSDFWDCVLVDTPSARPAAQAVKSVLDPDGDGYVSMVRLNSITASASATASLGSLLANYGNSEKPTAHVASPTAPSLGSLAMGSPAAVATARFTDDAPPPYVEAVRTAPPMPVTPTNAPMPPGYDYAVRPGVSYGMPPYPPASSQGYPTQATPVAGGYYPTGVQYSFPGPPVVLQPLPEFPGGINVGDAMECLEQSSIPLPNGNKMGGTKWWPCRIMRIDPSRVGRNIFIDYASYENSEWSHWTSPEFLRPVQGPSPASIPCRVGDAVEGRIGNRQTYMWWPGVVTRVDASGVTIRFQTNSGTTDTLTIARKDVRIGHDAKWRPSYSMH* # ORIGINAL: g3743.t1 original gene structure, not modified by PASA NODE_1282_length_12424_cov_40.7482 AUGUSTUS gene 1811 7432 . - . ID=g3743;Name=g3743.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS mRNA 1811 7432 . - . ID=g3743.t1;Parent=g3743;Name=g3743.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS exon 6864 7432 . - . ID=g3743.t1.exon1;Parent=g3743.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS CDS 6864 7432 . - 0 ID=cds.g3743.t1;Parent=g3743.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS exon 1811 6635 . - . ID=g3743.t1.exon2;Parent=g3743.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS CDS 1811 6635 . - 1 ID=cds.g3743.t1;Parent=g3743.t1 #PROT g3743.t1 g3743 MCWRFKRKVVPLPSVDGVVQSSSGPVPPDGIHLSTTTHPHGKVNFDASDDSHSHGKNADTKNNNNKNGNVNKGSVIIAADASHGGVRSPNARPTLPVARGDHDVDDWPVLTLDYVRNMLHRPGIRGGGGHAALRRRLSLGQWIELPVFVSSTFLDMHSERDLLSARAFRRLERKLQDDGYKIKIREIDLRWGITQEETDQGLGVEICLELVHMCRPFFLGLIGRRYGWQPDSSSYGVSNPDSPLFSQWLSRFPAGRSVTELEMFFATTPYTDEDGRVVHPRALVYERDGAFLDTPEFASDAATKPSLRAHFEQEPALVEGLKRRLSARGVHVRRYACKWSGAQCIVDEEGLAGGEVARDGVPRDSVGLLEDMVMNDLGAAVRAAFIPAPKHVTALDQSRNDHASFAEDCGSSAFGRDVIVSRLTSFAATGVLDTGVTRTTPKVVVLVATPGIGKSAVMARVVTALSESSHSVPVVSHFVGPVVGSSGVRQLLPRLCQEIARIGIDMSTTGVGSDAGTESYVELVNKGILGKAMADACTRVGRIAIVIDALNQLDDLDGAHEMRWLPKDIPDGVTVLVSAVEGRCTDALRRRTDVEFEVLQGLDDHEQRKEIVRRLLGAYGKRLGETACVGATVDGDDTQVPGMSQMDVLVSKACANSPLYLALACEEVRLFGDYGNKGDAVTLRIASLPGDVPGLLVQVLDRLEERHGCDIICDALSLLACARHGLGAEELRHALVIAGHVSDAQGRLPSRLWFELEVSLRPFLKTSVNGDGEQLLGFFHRQLALAVRIKYMAKCPANCVAFGVGDRCVHLSSPNTSDERSRRIHTILASLFDSAANTAAIGCKDGRATLRTLSESLYHRAMNGDASHVAAFLCNFGYLDARTALGDAQGIAEDFAWTETMFESNEDPVHVKVRSMRRFFQSHIHEFVKYPVAARVLVAALNGADEKTLLPESQRSACVANVRAAGAPVVVHRNRSTEPERCVGVLEAHTAAVSACPVSADGRIIATASLDATARLWDARTGQCTAVLEGHTAQILRCAMTVDGSMLATASGDSTVCLWDTASGRLVFSLAGHVGGVFGCAFSTDGRLLVTCSADRTGRVWDVASGECSAVLVGHDDWVTGCCMVTPNASLVATCSGDKTVRIWNGIDNRLLAALGGHTASIAAITCHMESGTIATVSNDATARLWKVTWDGVTWDGSASAGCLGLLEGHSDAVLCCAFSTDGVLLVTGSNDRSARLWRVYDGACLHTVTGHTNQIPSVAFALGGTAFVTCSMDRRICLWDVTSGKAIDVLRGHAGAVLSCSVGNNGTQLVTCSGDKTVRVWDLSLSALNRDSMPESTNSVAMGYHDAMQSACVFSPSGQVVATTSRDGSAGVYDCNGRLLAYMPGHTGTLNGCAFSCDSSLLATASDDRTCRVWNIAPLLSADSVATSRSSPPPVVDFIVLSGHKMGLTACTFSHRGRMLLTASDDRTARVWTQSQPSTAESAFTCTQVLQGHTLGLRTCSFSPDDSLVATLSNDKTARLWSTDRWASVVLEGHTASVIQCDFSADSKVLITCSNDKTTRGWATDAASRGTCLFVLEGHAAAVTCCTFSADNRIIASSSDDRTVRLWSFSEKRSTGALQSLFNTVGKGFGKAIGKETASGTPVCAQILRGHTTAVTWCAFSPDGKFVASVSSNGVVIHPTGVSRASGAGEWASPSLSWAILLSGGAVRCAIRPSGGSNTPGCTAVNNSNNTDARAAHAPPQSTPQSLVSSFLSSFSASAPALTPTVPASASSWVTAVTHGASCALLDVEWTAVTGD* # ORIGINAL: g3744.t1 original gene structure, not modified by PASA NODE_1282_length_12424_cov_40.7482 AUGUSTUS gene 8630 9682 . + . ID=g3744;Name=g3744.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS mRNA 8630 9682 . + . ID=g3744.t1;Parent=g3744;Name=g3744.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS exon 8630 9682 . + . ID=g3744.t1.exon1;Parent=g3744.t1 NODE_1282_length_12424_cov_40.7482 AUGUSTUS CDS 8630 9682 . + 0 ID=cds.g3744.t1;Parent=g3744.t1 #PROT g3744.t1 g3744 MSDGHLSRQERIAKTMECIITGWGGKINGGLFGHHLHTEGYSGRLKDFLEKFDTKFERPSRNGDVYLCDRRLELDRAVVDAVLDAIKADESRCIHGGELGMLLLNEGYSRVKVKHFLRAYDDEFEFQNGYVYAKELEFADAFNDLCKALYPSSLEGEGVLMAGVSAELKPRSNSHIQKNGRLLRFVRAHSAFMTAWDAKGGHKYCGLTVKGRKYAEKVIARERIAKSHLSKQMTAAPDHTKSSEDTTTPLLVADNTPLSPPVADDTPTPLLAADDTPLSPPVADDTPTPLLAADDTPLSPPVADETPTPLLAADDTPLSPPVADDTPTPLLAADDTPLSPPVADDTPTPC* # PASA_UPDATE: g3742.t1, single gene model update, valid-1, status:[pasa:asmbl_1072,status:12], valid-1 NODE_1282_length_12424_cov_40.7482 . gene 2 709 . + . ID=g3742;Name=g3742.t1 NODE_1282_length_12424_cov_40.7482 . mRNA 2 709 . + . ID=g3742.t1;Parent=g3742;Name=g3742.t1 NODE_1282_length_12424_cov_40.7482 . exon 2 208 . + . ID=g3742.t1.exon1;Parent=g3742.t1 NODE_1282_length_12424_cov_40.7482 . CDS 2 208 . + 0 ID=cds.g3742.t1;Parent=g3742.t1;5_prime_partial=true NODE_1282_length_12424_cov_40.7482 . exon 454 709 . + . ID=g3742.t1.exon2;Parent=g3742.t1 NODE_1282_length_12424_cov_40.7482 . CDS 454 507 . + 0 ID=cds.g3742.t1;Parent=g3742.t1 NODE_1282_length_12424_cov_40.7482 . three_prime_UTR 508 709 . + . ID=g3742.t1.utr3p1;Parent=g3742.t1 #PROT g3742.t1 g3742 GEGFQRLELDARLHVAVRAPPLRIHMSESTVRVLHQLGGYQIELRGTLAVKGKGEMTTYWLTGKEGWTKAMPDLSLAASMSQHHFK* # ORIGINAL: g4851.t1 original gene structure, not modified by PASA NODE_3157_length_4154_cov_34.6286 AUGUSTUS gene 144 3041 . - . ID=g4851;Name=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS mRNA 144 3041 . - . ID=g4851.t1;Parent=g4851;Name=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS exon 2885 3041 . - . ID=g4851.t1.exon1;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS CDS 2885 3041 . - 0 ID=cds.g4851.t1;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS exon 2313 2590 . - . ID=g4851.t1.exon2;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS CDS 2313 2590 . - 2 ID=cds.g4851.t1;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS exon 1677 1842 . - . ID=g4851.t1.exon3;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS CDS 1677 1842 . - 0 ID=cds.g4851.t1;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS exon 716 1339 . - . ID=g4851.t1.exon4;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS CDS 716 1339 . - 2 ID=cds.g4851.t1;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS exon 144 526 . - . ID=g4851.t1.exon5;Parent=g4851.t1 NODE_3157_length_4154_cov_34.6286 AUGUSTUS CDS 144 526 . - 2 ID=cds.g4851.t1;Parent=g4851.t1 #PROT g4851.t1 g4851 MQRNKHLLFMLSTALMLAIIAWSSAVVAEDILAYDDSSDMLYYTNNHLYEDTQFKMPRFFMWTIDARLPPPADTNLNSFTGKSAEEIRENIKSSFQCLYESFGKLGYVSERLGARLSIPEVDIVYSSPSAAKSINVFCSYSNTVAIFEDFNLKAELKFVVLVKTTQTSLVTKKYIGDILRDHDPGLIWGWKYGIVGRLDGGEARHICGNTPDKSRSALAIGPLKSKEGMDEVSAADYNELPPLFSRTDIVNAHKLAEANAKAATEAEKARVKRLKKIAVAEDADCYEDVKKADPPTDTTPVGVSEEIEWEREIGMLPGYGIEEGDFEYPKNVKKSDGDLSKGEDVSADEKSKGDGKDGAGKPLFCAVSREARQKQADNAFDDVLKKAAGEDGEAALKTWWNLCYVESCGRSADFKSKTCGEFIRRVGLKPTSLENGRGANLNVGWSISDTGVPMIMGAGTLEAFKQPDDEGGSTGFMGTMTTFVGKLVNAPSYAELDVILNRKYGGAGLDVVPDWLGLGTSTVISYSHKWVKCGF* # ORIGINAL: g7037.t1 original gene structure, not modified by PASA NODE_2869_length_4888_cov_41.4645 AUGUSTUS gene 826 2047 . + . ID=g7037;Name=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS mRNA 826 2047 . + . ID=g7037.t1;Parent=g7037;Name=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS exon 826 1199 . + . ID=g7037.t1.exon1;Parent=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS CDS 826 1199 . + 0 ID=cds.g7037.t1;Parent=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS exon 1332 1689 . + . ID=g7037.t1.exon2;Parent=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS CDS 1332 1689 . + 1 ID=cds.g7037.t1;Parent=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS exon 1883 2047 . + . ID=g7037.t1.exon3;Parent=g7037.t1 NODE_2869_length_4888_cov_41.4645 AUGUSTUS CDS 1883 2047 . + 0 ID=cds.g7037.t1;Parent=g7037.t1 #PROT g7037.t1 g7037 MASSSRVVVAVAGGTGGLGLIIAKALLEKKEAYEVRILTRDASATGDKKAVVDELKSLGASILSYTSDDVDSLAAVLRGSEIVVSALGGAALYQQQLNLIEASKKSGVRKFVPSEYGVDSDTHPDTGLPFFGPKLAVKAALKSSGLEYTFYYTGYFVDTTFIPWFGLDFSSGNVVIPGDGNAEITFTHREDVARFVAASLNSPLSKNASLRLSGETATLNQAAKKFADAGKKANVSYKSIADLDAAVKADPNPFGTIGEQLLLTLAKGYALVGASHNNNDFGAAGAPKHTLSAYIAGH* # PASA_UPDATE: g7038.t1, single gene model update, valid-1, status:[pasa:asmbl_5144,status:12], valid-1 NODE_2869_length_4888_cov_41.4645 . gene 2438 4734 . - . ID=g7038;Name=g7038.t1 NODE_2869_length_4888_cov_41.4645 . mRNA 2438 4734 . - . ID=g7038.t1;Parent=g7038;Name=g7038.t1 NODE_2869_length_4888_cov_41.4645 . exon 4719 4734 . - . ID=g7038.t1.exon1;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . CDS 4719 4734 . - 0 ID=cds.g7038.t1;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . exon 4417 4504 . - . ID=g7038.t1.exon2;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . CDS 4417 4504 . - 2 ID=cds.g7038.t1;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . exon 3440 4066 . - . ID=g7038.t1.exon3;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . CDS 3440 4066 . - 1 ID=cds.g7038.t1;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . exon 2438 3125 . - . ID=g7038.t1.exon4;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . CDS 2711 3125 . - 1 ID=cds.g7038.t1;Parent=g7038.t1 NODE_2869_length_4888_cov_41.4645 . three_prime_UTR 2438 2710 . - . ID=g7038.t1.utr3p1;Parent=g7038.t1 #PROT g7038.t1 g7038 MLEGCCATLGRGIGTFVNQFIKKPLNQTLIDPGSWALLGAAGFWTGSARVTVTVAAIIFEITGDIRYLPAIAIVVCFSKLVADRLDHGLYHMMLDAKRLPFLPDEPDHAMERLAVWDVMATQVVCLEVLEKASHIRTILEDTTHNGFPIVTYGPGPEHKNKLVGLVLRSQLNAILNMTRDFVEENVVNLSGHMHATPTVVVADAKVIQAYRQFRNLNLRHMCVVTSEFEVIGMLTRKDFLFHYRTRSLSASSSMASLHDGGRRDSTPLLDDQDLTGHEDSLAGNVAANTFANASFVTGYPSGDGDDGTSLKSEDDGVLAGVGTTGTDAFEMRNFSTFVGGGGSTGDRRAVGAGSRLSARSSDNTYGDHSDDDDNDERSLIR* # ORIGINAL: g5306.t1 original gene structure, not modified by PASA NODE_3664_length_2996_cov_40.6001 AUGUSTUS gene 57 2320 . + . ID=g5306;Name=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS mRNA 57 2320 . + . ID=g5306.t1;Parent=g5306;Name=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS exon 57 228 . + . ID=g5306.t1.exon1;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS CDS 57 228 . + 2 ID=cds.g5306.t1;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS exon 390 1106 . + . ID=g5306.t1.exon2;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS CDS 390 1106 . + 1 ID=cds.g5306.t1;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS exon 1394 1642 . + . ID=g5306.t1.exon3;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS CDS 1394 1642 . + 1 ID=cds.g5306.t1;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS exon 2050 2320 . + . ID=g5306.t1.exon4;Parent=g5306.t1 NODE_3664_length_2996_cov_40.6001 AUGUSTUS CDS 2050 2320 . + 1 ID=cds.g5306.t1;Parent=g5306.t1 #PROT g5306.t1 g5306 PVSDVAGSFSFRDALGLDHSFEVPASLQSVFGMNVTCAISTFAVFRNNPFVPVQPQEVLSNIVSFSFENTTVTNLQEPVTFSISLFNSTSVNESSLAYLQCAWWNEGTGLYSTDGCVVVSRSQTSVKCACTHLTSFAVLFDVSGNSLSSTEENVLSIMTYVGCGISIAGCALTILTFLALPRLRTGPSVLVMNLCLALIAVNIIFLSAIDATGNKGRCKAAAVLLHYFLVAAFTWMALIGINVWQNVVKVSIGSTFGAVSWRTYVVGWGAPVLLVGATVIADAGLHGAVEYGDDEKCWIGDRWGLVGSFVVPVGIVIVANIVVFSLAARSLISAAKQRSEMSGTLRNMQQEVLIFLSLLIILGGTWIFGYFALFSKGFWYPFVILNSLQGAFICIAYTLRSRVYRAWKDKLEETTGITTSQITSSRRTSSYVTGSVGSQRKESTYDDAYVETIDMNMKTIREESGDVV* # ORIGINAL: g3764.t1 original gene structure, not modified by PASA NODE_2107_length_7707_cov_58.7348 AUGUSTUS gene 3982 6168 . - . ID=g3764;Name=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS mRNA 3982 6168 . - . ID=g3764.t1;Parent=g3764;Name=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 5965 6168 . - . ID=g3764.t1.exon1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 5965 6168 . - 0 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 5273 5536 . - . ID=g3764.t1.exon2;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 5273 5536 . - 0 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 5102 5183 . - . ID=g3764.t1.exon3;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 5102 5183 . - 0 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 4764 4945 . - . ID=g3764.t1.exon4;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 4764 4945 . - 2 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 4520 4672 . - . ID=g3764.t1.exon5;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 4520 4672 . - 0 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 4300 4393 . - . ID=g3764.t1.exon6;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 4300 4393 . - 0 ID=cds.g3764.t1;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 3982 4196 . - . ID=g3764.t1.exon7;Parent=g3764.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 3982 4196 . - 2 ID=cds.g3764.t1;Parent=g3764.t1 #PROT g3764.t1 g3764 MDRAIDSLRIFLKSIPLNSSFNIVGFGSRSVKLWPESNRYDEKSLQVAEAHVDGIKADEGPKCSMRSNKSLKLACFAVLRGVKYPPPGSAQLKPVKRLVLQEGRFGDGRFTKKLFKKWAKDSAYEKFIKQSFRDKRNHVTSALKSALARLVEDRATTLLALGGHNFTSVSAAMLAVRVDWSTTEAIARGDYRVEKNDDDEKTDDYGELFRDAIKKIFLTPFRNIKESDLLKKLTLSDLAFAEIVMEHFLVNPNSNFNMESREENLLTSRMSDLKDRKTNWKAATQAIATARSDDATTQGEDSPNDGSELSGKSRRHQLTKAGGSLKGKRKRPTGTDGESSDEDSGRDKKRFRRASSSTSDSDESESDAESESDESQSSDNDESKSSCSDDGSSDSSD* # PASA_UPDATE: g3763.t1, single gene model update, valid-1, status:[pasa:asmbl_3535,status:12], valid-1 NODE_2107_length_7707_cov_58.7348 . gene 1992 2971 . - . ID=g3763;Name=g3763.t1 NODE_2107_length_7707_cov_58.7348 . mRNA 1992 2971 . - . ID=g3763.t1;Parent=g3763;Name=g3763.t1 NODE_2107_length_7707_cov_58.7348 . five_prime_UTR 2959 2971 . - . ID=g3763.t1.utr5p1;Parent=g3763.t1 NODE_2107_length_7707_cov_58.7348 . exon 1992 2971 . - . ID=g3763.t1.exon1;Parent=g3763.t1 NODE_2107_length_7707_cov_58.7348 . CDS 2275 2958 . - 0 ID=cds.g3763.t1;Parent=g3763.t1 NODE_2107_length_7707_cov_58.7348 . three_prime_UTR 1992 2274 . - . ID=g3763.t1.utr3p1;Parent=g3763.t1 #PROT g3763.t1 g3763 MIQRNWKRWFKRRMYFVKMACRVVIIDMGGELNDRCRFYPLTAECHLYSVNSSGEFPSFGDLFRYPNNAGTFTYDTLKAVVVVGNTFKDAFVVRGDRYEDDCRDLSFIDAAQFAGNISSNAQTRNPNADPVPLIFIQGGDFRANMAKDIDFMLKSIGASPKFWTVHALDGEFDKGRLTSLLGTLKRTESREGCRNSVLGKEPTQIDLSTVETCSARIRRELWANSGR* # ORIGINAL: g3765.t1 original gene structure, not modified by PASA NODE_2107_length_7707_cov_58.7348 AUGUSTUS gene 6224 7074 . - . ID=g3765;Name=g3765.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS mRNA 6224 7074 . - . ID=g3765.t1;Parent=g3765;Name=g3765.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 7072 7074 . - . ID=g3765.t1.exon1;Parent=g3765.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 7072 7074 . - 0 ID=cds.g3765.t1;Parent=g3765.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS exon 6224 6862 . - . ID=g3765.t1.exon2;Parent=g3765.t1 NODE_2107_length_7707_cov_58.7348 AUGUSTUS CDS 6224 6862 . - 0 ID=cds.g3765.t1;Parent=g3765.t1 #PROT g3765.t1 g3765 MQFYKVGEDRSEITYIFPIDSKAAIVGFVAVVGNRTLVGKVQSKETARDVYEVSKDAGHGTFLLEAVTGDVLEVSLGNVAKNTEIKITVSYVAEVTVSQHGFQFVPTVVVPRYGGVGGSAGGSASGSASGILSSVNLTIEDVAEPPISGSHQISAAWDGSQALVSLLSGSVTMDRDFVVEYVPKGVVSKAGFVTAIANERNGSAVPVYSPARA* # ORIGINAL: g11592.t1 original gene structure, not modified by PASA NODE_1346_length_11872_cov_40.9167 AUGUSTUS gene 43 710 . + . ID=g11592;Name=g11592.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS mRNA 43 710 . + . ID=g11592.t1;Parent=g11592;Name=g11592.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS exon 43 710 . + . ID=g11592.t1.exon1;Parent=g11592.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS CDS 43 710 . + 2 ID=cds.g11592.t1;Parent=g11592.t1 #PROT g11592.t1 g11592 GTADLIAWVSDGGTNTEYDSQSPLAATVVDMANVLGDRELALQAAMDNAFATLAGSPFQLRMTAAVASANPAATTAGVASWFAENQSTVTSNILKYLVRVLFPAKWQVCYYYNYKNEHSPCQGQNGGSKFWDYSNGGIHYYTLGAVDPDWNAETSYGWICPDGEFTKDVKVAASVYNLAGYDYSFEESIVDWLVPTPPNTVTLDNDHWSTFQPAVACPESS* # ORIGINAL: g11593.t1 original gene structure, not modified by PASA NODE_1346_length_11872_cov_40.9167 AUGUSTUS gene 1386 3302 . + . ID=g11593;Name=g11593.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS mRNA 1386 3302 . + . ID=g11593.t1;Parent=g11593;Name=g11593.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS exon 1386 3302 . + . ID=g11593.t1.exon1;Parent=g11593.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS CDS 1386 3302 . + 0 ID=cds.g11593.t1;Parent=g11593.t1 #PROT g11593.t1 g11593 MGTEELDCEYTRTADCINPNCVHPKKHVQLDRSAFNKNANADSSESCVHMAMDSISGDGSDGDAASTAVLQELNDALSRLTDSSSREIELSADAQFSDEFRRICDAMDSLYVILGDHRVVGEHQLSVAESSSSMIRACNNTLQLCGKVSDFISGLHLGAMHPTVVAANALFTMASVKSTLGLYHEALALYERALYELMKLDGDEHAARVGDTLYAMGAVLTQLGRCDEAKAVLERSLSSRRKQLQDGNDGIVDIAETLIALAIVVLKTANKDEGVAFIRDALEIHRKLSCAGDCASPPNTLPPPSSDQDQPLRSVFIARLKKRRQIAVAQSLYDIGVGLFASAASIDEALASLTESLSVRRGCLGNDHVDVAASLMAIANVHVQREQYNNALFALQEALAIQQRALVYAEQVSRAELPPAPASSLAANTVRLRLLIVDTLRQLAGVLFKANQLDDAIDYLLDALDIARLCHGANHDDVAEIMLKIGSIFLSRGDCKEGVEFCSVALAIKRMHLGDDHPQVIDVEGVIALFSSMDDDDDDDIFDEMTFTQAIEATTCRIPATVVAKSAKSSKSAKVSGVKKKQKRKKGKIGTGGVIGKEALQVPPSPTPGGWGWTDVGVAVAVIVLGAFLVRRLMTASP* # ORIGINAL: g11595.t1 original gene structure, not modified by PASA NODE_1346_length_11872_cov_40.9167 AUGUSTUS gene 8811 10393 . - . ID=g11595;Name=g11595.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS mRNA 8811 10393 . - . ID=g11595.t1;Parent=g11595;Name=g11595.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS exon 10147 10393 . - . ID=g11595.t1.exon1;Parent=g11595.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS CDS 10147 10393 . - 0 ID=cds.g11595.t1;Parent=g11595.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS exon 8811 9745 . - . ID=g11595.t1.exon2;Parent=g11595.t1 NODE_1346_length_11872_cov_40.9167 AUGUSTUS CDS 8811 9745 . - 2 ID=cds.g11595.t1;Parent=g11595.t1 #PROT g11595.t1 g11595 MAARVVAPSPEKDTPERVATVEDVAHPDGEMAAAAVAGRSGAFGLGDQWRIPGGFDYIACAIAAVLLAQVLYWALPQYNVASEFIRKDVYIKSERGDSSLVLRAKETNYVGLLDRKYPEYLAQQWTFTDGGYILNMADPSLVVGITHANMARLVQRQSSDASQRWFWDGHRIANVFDPDLVLKVANDNRLLASKRVANETRQLWRHTPDKCIESLHKFEYVLEASPAVTVGGRSTGRALAVYGRERAADHKAQLWVFFEDGTIRNRANGMYLQVSVNNDVVVLGKADSIEAAVLASRATHARWWYAYIPEMIINALGSAYGSGKDETGSLVPSPLQKWVVLPDGSVRSGLGRNFVLDLDDDNRAILWERKPTRRPNQSWNIVEKEATLSQNKD* # PASA_UPDATE: g11594.t1, single gene model update, valid-1, status:[pasa:asmbl_1274,status:3], valid-1 NODE_1346_length_11872_cov_40.9167 . gene 3855 8418 . + . ID=g11594;Name=g11594.t1 NODE_1346_length_11872_cov_40.9167 . mRNA 3855 8418 . + . ID=g11594.t1;Parent=g11594;Name=g11594.t1 NODE_1346_length_11872_cov_40.9167 . five_prime_UTR 3855 4088 . + . ID=g11594.t1.utr5p1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 3855 4660 . + . ID=g11594.t1.exon1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 4089 4660 . + 0 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 4935 5079 . + . ID=g11594.t1.exon2;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 4935 5079 . + 1 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 5495 5562 . + . ID=g11594.t1.exon3;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 5495 5562 . + 0 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 5837 5987 . + . ID=g11594.t1.exon4;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 5837 5987 . + 1 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 6381 6450 . + . ID=g11594.t1.exon5;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 6381 6450 . + 0 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 6645 6743 . + . ID=g11594.t1.exon6;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 6645 6743 . + 2 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 7047 7199 . + . ID=g11594.t1.exon7;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 7047 7199 . + 2 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 7551 7666 . + . ID=g11594.t1.exon8;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 7551 7666 . + 2 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . exon 7825 8418 . + . ID=g11594.t1.exon9;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . CDS 7825 7980 . + 0 ID=cds.g11594.t1;Parent=g11594.t1 NODE_1346_length_11872_cov_40.9167 . three_prime_UTR 7981 8418 . + . ID=g11594.t1.utr3p1;Parent=g11594.t1 #PROT g11594.t1 g11594 MNDSTESLEDAQAPLLADRGVKSNNKGFLSSIRRLSSTQGSSSQVASSSEQQFNARGADATVVDKEMTKGQNLGVSGGSRDNLVIDRNSGGAARGGNRSQESLEMDETNEVPPPREPEGDYRRENGPFNGDRRVTSVDVGEEEAEGMSQDDIKHGAAQVINLIIPVSICMMFVVATMQSITYYKDGGGQTLYYIAFKENDNQSSGEKFGGAIVNVIIIIGVILAMTCLLVVLYKYRCYKAIWLWMFLSTCMLQFLFTYTYLLMVLDRYNTPMDWITFVFVIWNFGVVGVLSIHYKLPLLLQQGYLIITSALLALTLIKYLPDWTTWILLGAIAVYDLFAVLCPRGPLKVLVETAQARNEPLFPALVYSSTMLWLVGGMADVETPTNGRSSQQQLNRQSAPAAVEEREATDEEAAGEEEERHGVKLGLGDFIFYSVLVGKAATRDEWSTILACFVAILVGLCLTLLLLAVFRHALPALPISIAFGLVFYFTSRYVLVPFNEQLAIDQVFV* # PASA_UPDATE: g2888.t1, single gene model update, valid-1, status:[pasa:asmbl_7161,status:3], valid-1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . gene 498 1903 . + . ID=g2888;Name=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . mRNA 498 1903 . + . ID=g2888.t1;Parent=g2888;Name=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . five_prime_UTR 498 603 . + . ID=g2888.t1.utr5p1;Parent=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . exon 498 774 . + . ID=g2888.t1.exon1;Parent=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . CDS 604 774 . + 0 ID=cds.g2888.t1;Parent=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . exon 1170 1903 . + . ID=g2888.t1.exon2;Parent=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . CDS 1170 1469 . + 0 ID=cds.g2888.t1;Parent=g2888.t1 NODE_4269_length_1903_cov_39.267_potentialcontaminant . three_prime_UTR 1470 1903 . + . ID=g2888.t1.utr3p1;Parent=g2888.t1 #PROT g2888.t1 g2888 MSSSLRAFIVLEAVVSLGSGVFMALAPRLALQQMMPPHRHLLITPVAEAAVAWFSAMVCMSAYQLFRSLYIADASQAHAVRRVVTETFLLGDILYLLAFVPFVQYGGGGEWNPATLFAAGITVFLALGRAFFLATELTLQAPQQQQQSGRGLAKRK* # PASA_UPDATE: g7573.t1, single gene model update, valid-1, status:[pasa:asmbl_6862,status:12], valid-1 NODE_4017_length_2337_cov_31.2538 . gene 66 2111 . - . ID=g7573;Name=g7573.t1 NODE_4017_length_2337_cov_31.2538 . mRNA 66 2111 . - . ID=g7573.t1;Parent=g7573;Name=g7573.t1 NODE_4017_length_2337_cov_31.2538 . five_prime_UTR 2035 2111 . - . ID=g7573.t1.utr5p1;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . exon 1933 2111 . - . ID=g7573.t1.exon1;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . CDS 1933 2034 . - 0 ID=cds.g7573.t1;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . exon 1226 1329 . - . ID=g7573.t1.exon2;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . CDS 1226 1329 . - 0 ID=cds.g7573.t1;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . exon 486 654 . - . ID=g7573.t1.exon3;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . CDS 486 654 . - 1 ID=cds.g7573.t1;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . exon 66 209 . - . ID=g7573.t1.exon4;Parent=g7573.t1 NODE_4017_length_2337_cov_31.2538 . CDS 66 209 . - 0 ID=cds.g7573.t1;Parent=g7573.t1;3_prime_partial=true #PROT g7573.t1 g7573 MSRDGETRGRSRGRDLLRMHKMHRMQMLMRPPNAHYIRTAGPSEDRACFEHSGFEVAMFVDPSDGDVYSPAMAENRLMSQFESEQLMAVTCVSLFDSLVSEMIRSLMSSSSGGVGLHLEIAALYEAAIALHHRGDEGYAVHRINFAKFIAKSSKAFAINKIHTDNLYLLERAM # ORIGINAL: g11978.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 17639 18100 . - . ID=g11978;Name=g11978.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 17639 18100 . - . ID=g11978.t1;Parent=g11978;Name=g11978.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 17639 18100 . - . ID=g11978.t1.exon1;Parent=g11978.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 17639 18100 . - 0 ID=cds.g11978.t1;Parent=g11978.t1 #PROT g11978.t1 g11978 MATPLLGRFTKFPCELFRIGAKRGVVLRDFAKQEALGRAAFDFHFEKDGLIHPRPGSEFLGPNGMSLRPGGPNLGNILSSFRGDVIYAIPAGTVLPPHFVLLHEHTDHYSLQTTEPVTLKEINKRMTDFVEQFPVITRKQYFERFPLFARPSS* # ORIGINAL: g11983.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 37291 42195 . + . ID=g11983;Name=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 37291 42195 . + . ID=g11983.t1;Parent=g11983;Name=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 37291 37359 . + . ID=g11983.t1.exon1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 37291 37359 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 37522 38193 . + . ID=g11983.t1.exon2;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 37522 38193 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 38560 38676 . + . ID=g11983.t1.exon3;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 38560 38676 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 39014 40384 . + . ID=g11983.t1.exon4;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 39014 40384 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 40740 41804 . + . ID=g11983.t1.exon5;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 40740 41804 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 42064 42195 . + . ID=g11983.t1.exon6;Parent=g11983.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 42064 42195 . + 0 ID=cds.g11983.t1;Parent=g11983.t1 #PROT g11983.t1 g11983 MVADSAALAMDDKSSKMAAARKRLDEFRKKKSTSNESAADGDSAIVKPKKSQVSDNSAFTQHTPVASTADPVHPVASSQALRSSANVRHNGPSMPLSPVAEASPIAPRRDISAGRPVVASTVNAQKSLWGSMPDINGGAAPRAYGSGDVVPLASMDRQDVVPSSVGVNGGVPQLRLSGDLALQPVTSTGIARVGSYTHVGAPASSSYVPIDRSLSASDLQQVGRSAPLAHANGGSAAGMSSTDRLRQLTQRLNNLAADTRVVTPTGRTSPAPSPSPSASESVLVSKIQQLSVERDQLKRALDELQRVHASQPTTSSNAVTQLQRQVDSLQSHMQQMGVRADADRRALEQQLRIHTQTIDILVEEKNELSSREKSVLARIAEADRLSTQLRAELDAERKRSSALASASSNGAGSASASAMHALEGEVAKLKVRVGELSGQLTVAADERQRALARADDASQAADELRLKLVTAVGEGESLRKRNVELEGKLDAADAIMRQLGHWDRAGHATLGGGDDGEGGNIRSAGVAGASGVAGEGSRTAGGPMDLAEGMRRLTSERQELHAQLAQAQHTSEQLKAEKREVTAHWKAANERMTVASKQLSEAQQRLASLESQLATAVDEREEAFRRTAESKTVAEGLQKELDALSTTRRALEDQVALVLASAAHASDSQAKEADGLREEMEQLRAQVAGLEGALAEQAERARRFGEQASDKEGILSRARADADTISRATTQNRELKERLVLLEDKFIEMTNANAELTDKLYSANHVLNAERRKREEAEVARNAAESLVETLTAQVSETRREMEEHRGDKQLHKHASGHAGDEELHAPPNGDRTLSRVTSSDSGAGSIEVAEDANAAEIARLSMLLDDHKRQLEAQRRLSESLQKELLLETHRAASGQTTATAIATGRSQATGTTTLQTTGEGAAADKETVGVRRSGEDQEDHTLAMIAELKAENVRLRDAIDALGVRLSALLEERQALIDRVETEEHLNVQLSGEVETIGEYISLYHQERRALRERAVQKDALVAQLALSRDEMQEKCGELKSLVLRLLAERDGSAAHRVEGKADGDTAETQSSAAAPVDGGAALNNSEGANVRQALEKLEGPRLPRHGESVVNILESIKFDAPAIEFKPCARCSSRMYRV* # ORIGINAL: g11981.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 26620 27990 . - . ID=g11981;Name=g11981.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 26620 27990 . - . ID=g11981.t1;Parent=g11981;Name=g11981.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 26620 27990 . - . ID=g11981.t1.exon1;Parent=g11981.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 26620 27990 . - 0 ID=cds.g11981.t1;Parent=g11981.t1 #PROT g11981.t1 g11981 MLRFAPSAARAATKAVASRRTLATAAAASVKPWHLDAALRRRFPDRQGAPTAPEDYMALELECGAHNYTALPAVLERGEGIFLYDVKGKRYFDFLSAYSAVNQGHCHPRIVKAMIDQCQKLTLTSRAFHSDQLGIFELFITDFFGYDKVLPMNTGVEGGETAVKLTRKWAYTTKGVPHNQAKIIFAEGNFWGRTTTAVSTSTDPTCKDGFGPFTPGFPIIPYNNLDALREAVKDPTVAGFYIEPIQGEAGVVVPHEGYLREAKKICKDANVLFIADEIQTGLCRTGRMLACDHEGVRPDILILGKALSGGLMPISAVLCDNEVMLSIKPGEHGSTYGGNPLACRVAMEALQVLRDEKLAERSEKLGQKFRERMREMKYPWIKDVRGKGLLNAVELHPTHHFSAYKITKKLIENGLLAKTTHDYTIRFAPPLVMSDAHLEEGCEIIKKVFAYADQAH* # ORIGINAL: g11979.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 18700 20332 . - . ID=g11979;Name=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 18700 20332 . - . ID=g11979.t1;Parent=g11979;Name=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 20237 20332 . - . ID=g11979.t1.exon1;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 20237 20332 . - 0 ID=cds.g11979.t1;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 19866 19980 . - . ID=g11979.t1.exon2;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 19866 19980 . - 0 ID=cds.g11979.t1;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 19436 19738 . - . ID=g11979.t1.exon3;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 19436 19738 . - 2 ID=cds.g11979.t1;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 18700 19265 . - . ID=g11979.t1.exon4;Parent=g11979.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 18700 19265 . - 2 ID=cds.g11979.t1;Parent=g11979.t1 #PROT g11979.t1 g11979 MSFNVRLDVEMDGNNAWLFRKDAVGNLLRHLQPDVIGLQEPLAHQVADIASSLGEEYAWVGVGRDDGVCKGEFAPVFYNTNSLRALRWKTLWLSDTPQSPGTRFDSSACNRTATVVDFESLYARNSAAGYDRTPLMLRFINTHLDHIGHYARVQSSRLLLAAAASCGGADCDIVAIVGDFNCESGSEPYSIIANAMQDARFVRSEGTDDVNEGRHSHVPQDMARQSPVSLSALGNAAARDNALSRNSCDGPTGLGLRTPDDSHCGSATFTGFRGEYCAVIDHVFIGGCAMKLRTSKCDQMAMNTAAVDGLWRQSSTWAAQVEKYILEDHSRTRTGGLLSDHRPVIVDVLIAPEKRNHTQ* # PASA_UPDATE: g11984.t1, single gene model update, valid-1, status:[pasa:asmbl_8849,status:12], valid-1 NODE_67_length_45685_cov_42.0148 . gene 42447 45558 . - . ID=g11984;Name=g11984.t1 NODE_67_length_45685_cov_42.0148 . mRNA 42447 45558 . - . ID=g11984.t1;Parent=g11984;Name=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 45343 45558 . - . ID=g11984.t1.exon1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 45343 45558 . - 0 ID=cds.g11984.t1;Parent=g11984.t1;5_prime_partial=true NODE_67_length_45685_cov_42.0148 . exon 44938 45162 . - . ID=g11984.t1.exon2;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 44938 45162 . - 0 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 44523 44672 . - . ID=g11984.t1.exon3;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 44523 44672 . - 0 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 44254 44307 . - . ID=g11984.t1.exon4;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 44254 44307 . - 0 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 43803 43945 . - . ID=g11984.t1.exon5;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 43803 43945 . - 0 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 43431 43643 . - . ID=g11984.t1.exon6;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 43431 43643 . - 1 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 43037 43182 . - . ID=g11984.t1.exon7;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 43037 43182 . - 1 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . exon 42447 42734 . - . ID=g11984.t1.exon8;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . CDS 42649 42734 . - 2 ID=cds.g11984.t1;Parent=g11984.t1 NODE_67_length_45685_cov_42.0148 . three_prime_UTR 42447 42648 . - . ID=g11984.t1.utr3p1;Parent=g11984.t1 #PROT g11984.t1 g11984 ELALIIDGHSLLYALDDDIKKDFLRLAHTCRAVICCRVSPLQKAEVVRLVRDNSGAITLAIGDGANDVGMIQAAHVGVGISGQEGLQAARAADYAIAQFRFLKRLLLVHGAWSYARLSKVILFCFYKNIALYFIEFWFAMTNGFSGQILFDKWLLALYNVLFTVLPPLAIGVFDRDVSAEMLMKVPQLYSIGQTNSRFNTRVFWGWCANAIFHSLLLFWLPLAACTQDVIFGNGQGSGMWLQGLIVFTCAIITVTLKAGLITTRWTRPVHIAIWGSLFIWLFFILIYGAVWPGMGSIGTEMYAVDKHMFASGVFWFLMFIVPVSCLFRDYTWKTAQRMFFPRPIHIVQEMEMSDADVSLFIHAFSAASAAIRRIPHMIGLRNRGFAFSQEEKGQADLIRKYDSNMDKPEG* # ORIGINAL: g11977.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 14062 16379 . - . ID=g11977;Name=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 14062 16379 . - . ID=g11977.t1;Parent=g11977;Name=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 15894 16379 . - . ID=g11977.t1.exon1;Parent=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 15894 16379 . - 0 ID=cds.g11977.t1;Parent=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 15186 15605 . - . ID=g11977.t1.exon2;Parent=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 15186 15605 . - 0 ID=cds.g11977.t1;Parent=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 14062 14709 . - . ID=g11977.t1.exon3;Parent=g11977.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 14062 14709 . - 0 ID=cds.g11977.t1;Parent=g11977.t1 #PROT g11977.t1 g11977 MATVYDVACLAADALSTSIHLSFSVPSWLLLVLTLWLLAVFLARKIITKICALFYIANASRRAQLGTHTFKNRRMQVHVVRPKFLDATARLDLFDLVNDMVDVNVADTEATARAASLFERYLESFEFALIFRDMVDGSLRGMMLLSRNEYEGPNNRRVLVMQAGLALFREEYRGSGLFFVVVGYFMLWEMLRHLRSGFYISYKSYSYKSYLGAIESFENVWPRYDRSIPEFEKSMIDEMGMRVMHGSETYDPSTCVVNREDTALRADAAPITEEDMKNPHIRFFQQQNPGWHRGNLLIVLAKVGPKDVWNMVWRGIVRMLGRGKGIRRTRGKVVATHAQFNAEQSQPQQPSSADGDKGVGAASTDQESNSRASAAPSPAVSIAATAPATTTDDHGSADSVSASEDSAHISPHLLPTPDGSVSRDGGGGRHDELLTSAQNACGCVRRVTHDNARHPRALSIAQLIMEPSVAMADVLTGERLFVSRRSSVLSSSLAKVQPDIDIPIDAQLDHATDNVSM* # ORIGINAL: g11982.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 29053 31899 . - . ID=g11982;Name=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 29053 31899 . - . ID=g11982.t1;Parent=g11982;Name=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 30383 31899 . - . ID=g11982.t1.exon1;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 30383 31899 . - 0 ID=cds.g11982.t1;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 30036 30180 . - . ID=g11982.t1.exon2;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 30036 30180 . - 1 ID=cds.g11982.t1;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 29608 29801 . - . ID=g11982.t1.exon3;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 29608 29801 . - 0 ID=cds.g11982.t1;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 29379 29445 . - . ID=g11982.t1.exon4;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 29379 29445 . - 1 ID=cds.g11982.t1;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 29053 29184 . - . ID=g11982.t1.exon5;Parent=g11982.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 29053 29184 . - 0 ID=cds.g11982.t1;Parent=g11982.t1 #PROT g11982.t1 g11982 MERNSLETILLTQLRGGQSGHSNKGSGTASGHVSGSDTDGDSTPGRSVYNTSVDSNLHSQHSGHSPSADMGVATDTQSSFGMQGADGPDLEMHQTRRLSREREDDEESKSRKKMAQRACVKCRIARARCSDVRPCVRCTRLGHADTCTDAPTSEVPGVRVGSVGSASIFPSPAFRGKGQSDGALLDIPQLHPQVAGSGTVRMPTGVPGPGVAPTPYPLGLGMMMVTPSSGSMSGNAVAIGGVSGGGVLMGGFAGHVGGGMAVPGQSLESGMHARTVQIHHQQQQVQAQPPPPQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHQQQQQQYYHGHKLSDSQSETAGQPIAMRGGSTGQGRLSAPGVGLPPHAIQSNLPSNDAIRQITIADGDLKQGGTLRLRPVAVMNGAVAAAAAAAVGVPAPKLPVVSGFGDLSVTHDGLSVDVAIGSGPLQSMDGSMSLYQVTLSNVMYESVRVLRERLEIYYKATGGDPSVGMSPEFLRFRIVWTTLLRYILSFRAASVLSDEDLHNNLEALSHSPLIIDWTAPVALHGRTRTIDLEMAMSAKMSMFHCVPCGIVMETTVGGRVIHYANDYMCRMFGYSQAEMVDILSKGFFNLLLQLFHPDEWSQSVLFIWKAAVENLEARLEYKAVLLRKNGEAFRAAVNVSFDYDHLGYFNSTSCLMEI* # PASA_UPDATE: g11974.t1, single gene model update, valid-1, status:[pasa:asmbl_8842,status:12],[pasa:asmbl_8843,status:12],[pasa:asmbl_8844,status:12], valid-1 NODE_67_length_45685_cov_42.0148 . gene 285 8949 . - . ID=g11974;Name=g11974.t1 NODE_67_length_45685_cov_42.0148 . mRNA 285 8949 . - . ID=g11974.t1;Parent=g11974;Name=g11974.t1 NODE_67_length_45685_cov_42.0148 . exon 6341 8949 . - . ID=g11974.t1.exon1;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . CDS 6341 8949 . - 0 ID=cds.g11974.t1;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . exon 5693 6132 . - . ID=g11974.t1.exon2;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . CDS 5693 6132 . - 1 ID=cds.g11974.t1;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . exon 285 5431 . - . ID=g11974.t1.exon3;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . CDS 429 5431 . - 2 ID=cds.g11974.t1;Parent=g11974.t1 NODE_67_length_45685_cov_42.0148 . three_prime_UTR 285 428 . - . ID=g11974.t1.utr3p1;Parent=g11974.t1 #PROT g11974.t1 g11974 MFVGDGLAHDILPRTIAAAFPPDEEIVSVACGPDNVAGLTSNGEICILSKTAAEVSPPTITKWKCAWLQADESTAMKSAMSTLSPPPAQIVVAGEKVSGVWATLRLVYLLTTEGRVCSALWSSIKLHTTIMKQQVVTPESTLPFKLYKPTNLTNPAGDASSSDFKAVLLATSTKRISVVYHHAPSDKYQLISSIDIPDGKIASIMEINETLASKPLSIAASDMATTALFADGSICVWGCRTDVAKSYASFGPSTVPVPPNSFKVGAHVAISAEAGNKTDWSVENGIVCMGFAGGYPVIVGDQWTQAIKTGASPFILKQDDVALLSEQYNACLSEMSGRAVSVDETAEINASAQDSHGLKTQRDDSGSLSPLTVPVVAQTADSQSTSSSIAPSFPLVVIGFMPPPNKNTGTVLALYNRGDVEYASVLLDSFACPSRTTNGEDGTNAKLTVNSADIGQAVMTVPVSRLLSSSELPNPTALRLSGRPLKIVPLLRKHFNVAASASVQVLAFAPGWDGVHVIATTMDGSAKELHHLVVAFSEFQKTEQEHQEKPLILSATLLERTEFDGVAEPVMGEKRVVDTVAHRGREGWLRVFGTRAFWMGAGPAEVLVCIDTRRSTKDDYRAFNCDTLGNLSCVDVQPTDSFGGIAVAGMAVVKQQLLHAAKTGDFDLFVRELARCDGSSTNCRMAILQKTEEGNILHHVRTIEQLTYLGKHPVFRQYARELAIHRDVAGRMPLDCALSTDTGLAVALLTLLRKCDALSFASISESVARFANEILSPLVVHLPVHKAEPTGSVTKLNGPASLRTRGGRAVLKNGDSLVLVQKNQKSSMGSAMIECDVSNGFVAEFSFVAEGAADGFAFVVMSGMSNETAGAHAGNTLGYSNAIGSGIAVEFDFYCNSDIGDPEVDHISVQHNRITGVHTTSNHSASVGCAKLAGRRLADGLEHSAKIVMDVNGSLAVCLDGTALVCAERWLTVVPQALLRSALNSWGDFIGKPRVGFTAATGGLTSTITITKFSLEVVGCVCQGKGTCAPEFGCQCGPCMAFTAPPAASVFKKTGLGETESLNSVPCDKIIAGDSRKDDSVRTPNSKGTTNATTKMSARSLRKSGKTTDVSPALGSFVFGSQENHTNTLFGAAAPQIPTFKFTMPSSTGAFGQTPVFGTSSASGTGAAPSPAFASGFAFGASTLPFGSPVAVDGSLTPFRFGSAAAETPVPLFGSPSTREASSGGGIEGGVPQTPAPAIASTVASKEISLVGWVSQNALSTHPHLQEFMLSAKVESLSLLTLVPAQLILDVRRSVCPGVQPPWQCPVYTEAARKLHGGDATFGPHTLIPLVALCGPAPCLLACRKLSGRTTVHATVMSLLSGDLADCAYDVVTTMAQQLSTAPAAALMEALVENALRLDGDSFCARAAAKVTLRGSMIAAVLESADVPELGRLVKTIIPAFKSVPGPIQDVLARLFQQSKAQAFVAVVSEAIAAGLSITMQSLCACIQAAPASDDILPAENADNPSSTAKSVHSEARRILLHTFSAKQEGPASPKHAVGECAEAAAMCVLTCRTCNVAVCNACAPHCHNTHELNYAVPGVGCKCKCSTVTGAILMGTPSLFSYLSCENASAMRDAIMALPMGEPASACDASVVSPLSQVDRDGRTPLLRAVFDHDWAYASRLVDMWKGQENRICNTTTGDSQGSTGLGALADNPTSHAEASALLTVDSKGNNFMHFVCVQTASSPLLSVKESYFPALGAFMEKIFAAVDIDQVKQGLRQRNAVGQTPLMAALLAAIELQANNAATNTRRSGDSASTPAAPVTPSLFLNTCSAFPIEDAVRETFHSADTISDSLCDVFCASLQNLSGNAVFKGRVIAAVHTLPEEQRTLVVRSAVRVFISFFLCNDASQNSPPDVLLRILRLSPSVALNALAEAARAVGHTVYSGFSMSDEQLNDSAEPSAALQAILHAHMAVPTLTPGSLLADTVGVDDALAKVSQSGRNNQTNNQRNTLGHIYFRIVKMACDFFVQNEAMSADIAGLLHARMSLAAAVTEAWTVAAQALACLELDLREGLRSPIVFRAQGCSLGDVLYGISRAWDGARGFASVRVPVHLAHIAHLADACHYVAQRSLSISALVGKLSFVPQHHAHHDRRTSGSNDTSEIEDVDQFFNRANSLSTRTKPTTLADRERASVLLLRNATVSGTPTDATLGSVVAAAPPTSYSGRRRTSRLLAAVEGDGSSAVPELTTGAFASWPLALTAIADAMATSGALQDPGTLTAAHVSMNARKTMLTNRVKKLVSKRSNASFRVTRQHIVMTSLSALKEASNPGTVSVAFANEAGSGPGVVRGWFTMFGKALIGDVPGDANATPASRSGLSTTTGSASTTGATPVPALRAPASDIFFVPSEVQGTFVPRTPLGVEWNTVREDAYKSIGVYLGMALLNNCVVPLVLVRPTLKYMIGRSLHMEDLAFYSPERYDALAKVLAMGAEELEAACLSFVIPHSDAEGGGTTDLLAPSGSDGGSVTVTQRNVREYVRLHAEALMVGSCKRELDALRTGFQSVIPPSTLSCASTIEFTMLLCGSQNVTGAELRAVCCIKNDSDSRPEAVQTEAWLWEIFNEMNSQQLAAFIYFSTGSPSIAPGITSITIAIGECCSRSADRRCRFGHCTHLPTAGVCSSSIQIAAYPSKDILREKILLASVHGTSYEFG* # ORIGINAL: g11980.t1 original gene structure, not modified by PASA NODE_67_length_45685_cov_42.0148 AUGUSTUS gene 21001 26175 . + . ID=g11980;Name=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS mRNA 21001 26175 . + . ID=g11980.t1;Parent=g11980;Name=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 21001 21088 . + . ID=g11980.t1.exon1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 21001 21088 . + 0 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 21365 21507 . + . ID=g11980.t1.exon2;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 21365 21507 . + 2 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 21820 22038 . + . ID=g11980.t1.exon3;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 21820 22038 . + 0 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 22260 22356 . + . ID=g11980.t1.exon4;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 22260 22356 . + 0 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 22514 22727 . + . ID=g11980.t1.exon5;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 22514 22727 . + 2 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 23046 23175 . + . ID=g11980.t1.exon6;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 23046 23175 . + 1 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 23306 23537 . + . ID=g11980.t1.exon7;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 23306 23537 . + 0 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 23670 24266 . + . ID=g11980.t1.exon8;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 23670 24266 . + 2 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 24430 24474 . + . ID=g11980.t1.exon9;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 24430 24474 . + 2 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 24614 24701 . + . ID=g11980.t1.exon10;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 24614 24701 . + 2 ID=cds.g11980.t1;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS exon 24930 26175 . + . ID=g11980.t1.exon11;Parent=g11980.t1 NODE_67_length_45685_cov_42.0148 AUGUSTUS CDS 24930 26175 . + 1 ID=cds.g11980.t1;Parent=g11980.t1 #PROT g11980.t1 g11980 MSLYGSVGGALVQSSFGISPARLVGTQQGASSLSIVPSGPLVGLSNNVELLRSHLEGVLHSHVGDDASAASVTAASMLRSLQNSFPTTYVPGSLVCDLAADDIVRDKRRRQYDPIDGSLLAHFYDANGVPCIAHAGGPQGNAVHIRNCLHFGVDGSPLSIHPSDSINVGQPIRGIAVSAAATDAHGVARTDYACHFFPLDCDATGESDRRDGRAVRRVNFEDVICCTSMGHQLGDECVIVTERGRTYTWSVSAGTRLVYDPPSSETDATTWRSVHFGANPQTIVCGVAKELSLLDIGSHARVTLARADGSNLIFGNGQLYACAAHPRNPLLTAACGETSLFLVDQRMPNRPLLNWTHEVDGHPTFLSCGRLGTEDYALLGCKDTRESVLFRYSSSPLPAHDTPLVYIDGRPVSYDVSAFARPGPTLGPSLPRRMCVYADAAFDGVSRVPMPLSGVALVFASARDEARQWELSPGDVRMEQERRRRSRGASRNDDSDVCPAFAFLSCSVAGDVYGQRYSTGGATDSPGVLREGCAAAAPIYEGLYGRMGVREGDYVSRAQLASCKRVDIRAACRHLIAESDEADPFESSDKVEISSQAMDALCSHIIGAVHTKWRSFTLFELCRDMIEAFSDEHITPRDVLAAVKRLCSDANPLITCHAARPIAGLRQSDHVTVAPPLLSRDADGVSGLPRSEDDGDRLHAARDAVRQCLEDAEAWIGNVRILGAGGGGKRSRFANTRRAAAAGVSAASVIVAPVALTAPALKGACSNPMAPFERILDTWVDGQRARPGEDDNWDGRTTAANADKTGEDVDPVPTREHPAMYLLHMWRRGGGSDGVAATDPSTVPVGPPARVGARAEAASKAPKRELAAAVKPKKVLVVPSVAAVGDSPARAKSRVTFSFEDDDAHGHGDDAYKAVTTRPTQLSNTSGALHATTTRTAGATNKTVAGAVPDPNSHESVDSDDWPRTPTRPPPLAIAIAATPPPAIASTRPPPESPSVRVGAVGMGATIVPDLKRASTGKDKGKTVKKPRISGF* # PASA_UPDATE: g11975.t1, single gene model update, valid-1, status:[pasa:asmbl_8838,status:3], valid-1 # PASA_UPDATE: g11975.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8840,status:12], valid-1 # PASA_UPDATE: g11975.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8839,status:12], valid-1 NODE_67_length_45685_cov_42.0148 . gene 10195 11401 . + . ID=g11975;Name=g11975.t1 NODE_67_length_45685_cov_42.0148 . mRNA 10195 11401 . + . ID=g11975.t1;Parent=g11975;Name=g11975.t1 NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10195 10376 . + . ID=g11975.t1.utr5p1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . exon 10195 10418 . + . ID=g11975.t1.exon1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . CDS 10377 10418 . + 0 ID=cds.g11975.t1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . exon 10510 10566 . + . ID=g11975.t1.exon2;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . CDS 10510 10566 . + 0 ID=cds.g11975.t1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . exon 10708 10745 . + . ID=g11975.t1.exon3;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . CDS 10708 10745 . + 0 ID=cds.g11975.t1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . exon 10831 11003 . + . ID=g11975.t1.exon4;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . CDS 10831 11003 . + 1 ID=cds.g11975.t1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . exon 11251 11401 . + . ID=g11975.t1.exon5;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . CDS 11251 11333 . + 2 ID=cds.g11975.t1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . three_prime_UTR 11334 11401 . + . ID=g11975.t1.utr3p1;Parent=g11975.t1 NODE_67_length_45685_cov_42.0148 . mRNA 10195 11401 . + . ID=g11975.t1.1.5b6be70c;Parent=g11975;Name=g11975.t1 NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10195 10418 . + . ID=g11975.t1.1.5b6be70c.utr5p1;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10510 10566 . + . ID=g11975.t1.1.5b6be70c.utr5p2;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10708 10804 . + . ID=g11975.t1.1.5b6be70c.utr5p3;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 10195 10418 . + . ID=g11975.t1.1.5b6be70c.exon1;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 10510 10566 . + . ID=g11975.t1.1.5b6be70c.exon2;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 10708 11003 . + . ID=g11975.t1.1.5b6be70c.exon3;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . CDS 10805 11003 . + 0 ID=cds.g11975.t1.1.5b6be70c;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 11251 11401 . + . ID=g11975.t1.1.5b6be70c.exon4;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . CDS 11251 11333 . + 2 ID=cds.g11975.t1.1.5b6be70c;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . three_prime_UTR 11334 11401 . + . ID=g11975.t1.1.5b6be70c.utr3p1;Parent=g11975.t1.1.5b6be70c NODE_67_length_45685_cov_42.0148 . mRNA 10195 11401 . + . ID=g11975.t1.2.5b6be70c;Parent=g11975;Name=g11975.t1 NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10195 10418 . + . ID=g11975.t1.2.5b6be70c.utr5p1;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . five_prime_UTR 10510 10804 . + . ID=g11975.t1.2.5b6be70c.utr5p2;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 10195 10418 . + . ID=g11975.t1.2.5b6be70c.exon1;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 10510 11003 . + . ID=g11975.t1.2.5b6be70c.exon2;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . CDS 10805 11003 . + 0 ID=cds.g11975.t1.2.5b6be70c;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . exon 11251 11401 . + . ID=g11975.t1.2.5b6be70c.exon3;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . CDS 11251 11333 . + 2 ID=cds.g11975.t1.2.5b6be70c;Parent=g11975.t1.2.5b6be70c NODE_67_length_45685_cov_42.0148 . three_prime_UTR 11334 11401 . + . ID=g11975.t1.2.5b6be70c.utr3p1;Parent=g11975.t1.2.5b6be70c #PROT g11975.t1 g11975 MAHSEGEDITLALQDDDSDVELDHGPSSHSERKKSASQPTQTRRQRFWHDPGVRKNWKQIAASIALFVVGFFFLIAAVAVWATSGFSSALVFVVVGLLCFIPGAYQTYMIYKIVQGTRGYEFSSLPYFES* #PROT g11975.t1.1.5b6be70c g11975 MSTSAIFPRFWHDPGVRKNWKQIAASIALFVVGFFFLIAAVAVWATSGFSSALVFVVVGLLCFIPGAYQTYMIYKIVQGTRGYEFSSLPYFES* #PROT g11975.t1.2.5b6be70c g11975 MSTSAIFPRFWHDPGVRKNWKQIAASIALFVVGFFFLIAAVAVWATSGFSSALVFVVVGLLCFIPGAYQTYMIYKIVQGTRGYEFSSLPYFES* # PASA_UPDATE: g11976.t1, single gene model update, valid-1, status:[pasa:asmbl_8847,status:3], valid-1 NODE_67_length_45685_cov_42.0148 . gene 11538 13681 . - . ID=g11976;Name=g11976.t1 NODE_67_length_45685_cov_42.0148 . mRNA 11538 13681 . - . ID=g11976.t1;Parent=g11976;Name=g11976.t1 NODE_67_length_45685_cov_42.0148 . five_prime_UTR 13554 13681 . - . ID=g11976.t1.utr5p1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . exon 13177 13681 . - . ID=g11976.t1.exon1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . CDS 13177 13553 . - 0 ID=cds.g11976.t1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . exon 12826 12926 . - . ID=g11976.t1.exon2;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . CDS 12826 12926 . - 1 ID=cds.g11976.t1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . exon 12320 12510 . - . ID=g11976.t1.exon3;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . CDS 12320 12510 . - 2 ID=cds.g11976.t1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . exon 11538 12100 . - . ID=g11976.t1.exon4;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . CDS 11621 12100 . - 0 ID=cds.g11976.t1;Parent=g11976.t1 NODE_67_length_45685_cov_42.0148 . three_prime_UTR 11538 11620 . - . ID=g11976.t1.utr3p1;Parent=g11976.t1 #PROT g11976.t1 g11976 MLLLLQQLRTGAASKVMAQQHAALRLLQGIIASGLPRTPLYQPLRSLSVTTRLCEQHRPSKSGDASAGKQAATTTSTTPPSGAWASFKAGAKKILGPFMTGSKALYNDYKKMRAIKRKLKDFHGDRTKLTREELIHLWETPRDVRKTLPLVIFFWVPTIGYLSPVLGYFFPKQLLSKQFWTPEQKEQFASDDFKNKVTAAEDVIECLRRDCEKIARDHAVLRKVLDTVTSGGEASPKDLLALLPLFMDALDLKNLPVTHLRALASVAGKSTYLPVPFILRRRISMEASEIAFDDLMLLKESADLPSEDARIAAHRRGIASWDSAASASTAVALHEWMEMSRAATATSKGRSIASFLAHVTAFNAVRKAASNVSPRHTTAPPA* # ORIGINAL: g2936.t1 original gene structure, not modified by PASA NODE_4891_length_1159_cov_25.4917_potentialcontaminant AUGUSTUS gene 2 468 . + . ID=g2936;Name=g2936.t1 NODE_4891_length_1159_cov_25.4917_potentialcontaminant AUGUSTUS mRNA 2 468 . + . ID=g2936.t1;Parent=g2936;Name=g2936.t1 NODE_4891_length_1159_cov_25.4917_potentialcontaminant AUGUSTUS exon 2 468 . + . ID=g2936.t1.exon1;Parent=g2936.t1 NODE_4891_length_1159_cov_25.4917_potentialcontaminant AUGUSTUS CDS 2 468 . + 2 ID=cds.g2936.t1;Parent=g2936.t1 #PROT g2936.t1 g2936 CAIAADSVENRAAIVSEGGLSVVVAGMCDAPRNAEIQVLGCRLLELLALDPTCVRCMERCRIQVSVIGAVPMDSTRCMERENAMSAIVAALNALPCDRHVLVAALKALLVFAELAENRRLLGVGAAGESIRRAMASLGDAHVEPDLCASLFAVM* # ORIGINAL: g8119.t1 original gene structure, not modified by PASA NODE_4340_length_1791_cov_37.4202 AUGUSTUS gene 182 1701 . + . ID=g8119;Name=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS mRNA 182 1701 . + . ID=g8119.t1;Parent=g8119;Name=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS exon 182 436 . + . ID=g8119.t1.exon1;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS CDS 182 436 . + 0 ID=cds.g8119.t1;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS exon 592 659 . + . ID=g8119.t1.exon2;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS CDS 592 659 . + 0 ID=cds.g8119.t1;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS exon 835 949 . + . ID=g8119.t1.exon3;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS CDS 835 949 . + 1 ID=cds.g8119.t1;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS exon 1189 1258 . + . ID=g8119.t1.exon4;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS CDS 1189 1258 . + 0 ID=cds.g8119.t1;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS exon 1541 1701 . + . ID=g8119.t1.exon5;Parent=g8119.t1 NODE_4340_length_1791_cov_37.4202 AUGUSTUS CDS 1541 1701 . + 2 ID=cds.g8119.t1;Parent=g8119.t1 #PROT g8119.t1 g8119 AVHGLNALRYGQWTQKMVPLLEMPDVLTTARKIINVERGAWVRMKRGVYKDDLGQVVRGNDNDDRVRVRIMPRIDITFLREKYSREGDKRRKATRRPPQRFFNADEITSIGGEVATVSEDGDEYQVFASGRYRDGYLYKDFPLDALITEGVKPSLDELQKFQTEDTGADLGLGDTKQAKSAPLTFSRGDHVEVTSGALINLIGIVQSVEGDNVLVLPTNVDGL # ORIGINAL: g4583.t1 original gene structure, not modified by PASA NODE_340_length_26485_cov_46.7418 AUGUSTUS gene 5925 10841 . - . ID=g4583;Name=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS mRNA 5925 10841 . - . ID=g4583.t1;Parent=g4583;Name=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 10017 10841 . - . ID=g4583.t1.exon1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 10017 10841 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 9551 9685 . - . ID=g4583.t1.exon2;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 9551 9685 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 8930 9338 . - . ID=g4583.t1.exon3;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 8930 9338 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 8537 8665 . - . ID=g4583.t1.exon4;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 8537 8665 . - 2 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 8179 8222 . - . ID=g4583.t1.exon5;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 8179 8222 . - 2 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 7703 7912 . - . ID=g4583.t1.exon6;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 7703 7912 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 7231 7422 . - . ID=g4583.t1.exon7;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 7231 7422 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 6620 6899 . - . ID=g4583.t1.exon8;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 6620 6899 . - 0 ID=cds.g4583.t1;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 5925 6232 . - . ID=g4583.t1.exon9;Parent=g4583.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 5925 6232 . - 2 ID=cds.g4583.t1;Parent=g4583.t1 #PROT g4583.t1 g4583 MATPQTPNGTASSHSGLIPPPDIPIRKRRIIGFDGLKRNFSTDPERLNRTRHLQVNGGRVADALVNRVLGNVPTHDTLFPPTVVKRPPEWKPPLISQQSLLSRRMLSNLTSDSHDSITSGGGNTAAALAGIAEAAEPPLPMLKHLKRITAALEPPPSPSLQSRQISAAGFLFGSDASAIVSYREAEVRRSGKSTPSSPKLAKSKSTSRLPPDHEKQRDRLARMVGDVPLLMAEGGESLGTSRDSLVDEFRNRQIEQIERDARKTQKEKDELAAFAYRYHSYARSCPDLSKDDLYLEQLEDDMNLTPPATAAIGGPMILLPHINNSVLHITRQSQGDEYNSNAAHSMYDHPRLSPSPSLDFRRKSMHAASLSVRTSEGMPSLTVDIPHPRRVSAPGITSPTLLLEQSDRFEAIKMMEEQEIRKRKNGMLRALAHNLRTYRAVADFEPVDSAELPLRKGDVYMVIRREKKGMWIAETGHGQQGRVNMDYLIAYDPALDTSDEARRQEEQRFQKRTNVAREIVDTERTYIHGLKTVIDLFQDPLFESGIMPKSVVQAMFPTHLPMLHTCHMILLERLEERLQNWGKNVYAQYCNDFTGAIQTINSALDHYDAFRLFLKETVQNPACNNLDLAAFLLTPVQRLPRYVLLLGQMLKYTGLDHPDHYYIGHALEKMRRVTEYVNERKGDMENRVAVSNMAANIKRASPQLRSEKTRLVKEVDVGIYIAETNHVKRGHMFLLNDALLVARYRKRPKEHCPEYGQFKQLEYLRLQELEFTLESGEIQLQIRSKGRGPVLQFNTTSERTKWKGMIDDAKNKFLADKTRARDARASKHIKAKSLVLPADKSFV* # PASA_UPDATE: g4585.t1, single gene model update, valid-1, status:[pasa:asmbl_6029,status:13],[pasa:asmbl_6030,status:12], valid-1 NODE_340_length_26485_cov_46.7418 . gene 17078 24967 . - . ID=g4585;Name=g4585.t1 NODE_340_length_26485_cov_46.7418 . mRNA 17078 24967 . - . ID=g4585.t1;Parent=g4585;Name=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 24761 24967 . - . ID=g4585.t1.exon1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 24761 24967 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 24397 24513 . - . ID=g4585.t1.exon2;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 24397 24513 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 23400 24029 . - . ID=g4585.t1.exon3;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 23400 24029 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 22925 23030 . - . ID=g4585.t1.exon4;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 22925 23030 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 22301 22463 . - . ID=g4585.t1.exon5;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 22301 22463 . - 2 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 21865 22029 . - . ID=g4585.t1.exon6;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 21865 22029 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 21544 21559 . - . ID=g4585.t1.exon7;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 21544 21559 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 21037 21318 . - . ID=g4585.t1.exon8;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 21037 21318 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 20666 20844 . - . ID=g4585.t1.exon9;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 20666 20844 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 20302 20333 . - . ID=g4585.t1.exon10;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 20302 20333 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 19628 20042 . - . ID=g4585.t1.exon11;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 19628 20042 . - 2 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 18879 19340 . - . ID=g4585.t1.exon12;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 18879 19340 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 18410 18556 . - . ID=g4585.t1.exon13;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 18410 18556 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 17666 18131 . - . ID=g4585.t1.exon14;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 17666 18131 . - 1 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . exon 17078 17493 . - . ID=g4585.t1.exon15;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . CDS 17431 17493 . - 0 ID=cds.g4585.t1;Parent=g4585.t1 NODE_340_length_26485_cov_46.7418 . three_prime_UTR 17078 17430 . - . ID=g4585.t1.utr3p1;Parent=g4585.t1 #PROT g4585.t1 g4585 MAGEEKWQSVCRWMGGLSLFPGLAPDAPSPFESVAEFACALKDGSLLCLLANKIKPRAIPKIQRNPQMQFLCFDNINNFLNVCKREFNLPPASMFTVEDLFYATDFGKVINALVLLSNSNACRVAGIPPVQLAPVKRNSSVHTLEAVFPLSSRTASPAGDVVTESLHEDDANAAACAEDEEEDIYGGLPEAMDKFREEQNQARSSLGNAMATHRGSIFAPNAIMPEGEVYSSGDMDDGVLVGVGGGDGSGEQEVAAEEDPVAKKERKRFLRLKEIVDTERAYAEQLRIIAEEFIPSIKRTCAWFMNDHMAFTLFANIEELSMQHAYIFPLLEEALDGNESMSQVFLDNRECFNGYGEYCANIPDAMKQLTLLDARSDFHQVHMAAKERAHQSFDLFSMLNLPMQRILRYPLLLEALQKATDSDHPDYATVEEALRTMREIAVGVNETKRERDKVRLVDELQERMDQYDGPNFTEFGALLKDGDLKIREDDRSHKHRFVFLFETALIICAAVEDRFTFKRLLRLCNCRLSDLHADDAKAHAWMLSCVVENISLRVTFYASSPQVKKEWVSALDTALSYLFPDDEFDETTDDKSGAPLDEVKHIFTLTDYRRPKFCAQCSKFLWGLSKQGYKCKNCDMDVHKHCLRLVTAPCCMKVGSPSVDSLPIHRSQSSTTLNSIASGASSSLSPGAGGLGVLPHAHSSSALPIGGSTYAIEENHYQAPNADAAARARLAGALMQMQQNQLALKSSPDAMRRPSVGTALDAMPLPPPRQRTLTDTSGLKHPRDHSSMQIPILPPSHVASSSTPASSAADQPPAMRVPPPILPRSPRPLSQMTDPPSTPPTRTVPVGASATISGTTPSRRPVPSVVGGNIFQSPVPATYNALQPGNRSSVAPGQSAAPYVAPRKALPIPGVSVTAAPPVVQRRASIPDKVESLPYYHGPTSRQDADALLQSRGVGAFLLRKRENAINDYVISVRHAEGIAHLLLKPSGDGYGLVEDEIFPSIADIVRTYRTALLSRHFERYPFPLSDPVLAPHVTAKPQPPNPATTTPRVASLGPTTQPQPQQQPQPQSQAPPPVQPRVSVAPRPASRSIGKPLARVLYDYAPTRADELALTAGDVIEIVNRDPNGWWKGAIDGRIGLVPSNYCEEILR* # ORIGINAL: g4582.t1 original gene structure, not modified by PASA NODE_340_length_26485_cov_46.7418 AUGUSTUS gene 307 5238 . + . ID=g4582;Name=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS mRNA 307 5238 . + . ID=g4582.t1;Parent=g4582;Name=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 307 1307 . + . ID=g4582.t1.exon1;Parent=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 307 1307 . + 0 ID=cds.g4582.t1;Parent=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 1606 4637 . + . ID=g4582.t1.exon2;Parent=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 1606 4637 . + 1 ID=cds.g4582.t1;Parent=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 5189 5238 . + . ID=g4582.t1.exon3;Parent=g4582.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 5189 5238 . + 2 ID=cds.g4582.t1;Parent=g4582.t1 #PROT g4582.t1 g4582 MARHSFEDRRENIAKELLATERSYVADLEVIVNGFMPNNSCVGGSECLSDYEWGIVFGNIEAVLACNRCFLSRLEMAIETGLPSGGYGVFAPCFTEHKAEFAAVYTEYCRNYRQAEQFLISRKEDRAVQAYIRACTSHLNLQLGLEASLLKPIQRILKYPLLLNELVKHTPDGYPETGVLANAKAHMDALASDINAKARSDAEALRSLTELIQGWTGDEYSRGRKIAESDVLVSKVTATRGPGGIVIATRKSTKARVAVLFDRAFMLLSRRVIHMRHKYAVSADIPLGRAKVLSVADGDGISHAWEILHMDTHKKYMILHKTAEEKADFGTTVIRQILKVSAVSTSKKRPLNPSSLPTAPFLDSAMQDPSTSRIGEKLQHHRSLPDLAAVGVPDALLAAPSSSVSSASASSIRPVSLTTAGLLSLPETPNISSFVPSTGNSTPTSSDSERPRFDFESEVFAALAEAADAGTGRKGGQPNGGIVDMSADLDKPGNEEESVSTPKSAGLNRQNQKKRVKKTRDSAGSASGGGVGGNKSSLTGLPTPPPDVANGASHSTAPPASYGDAGGGAVAVSAATEVCVAVVAYQPFEGDPDSLPLVVGDIVRVIRGSDGLGDKSRWLVSKGSARGLVPSAVLKRLRVEPSLDTKSASSSLNKMTSGASHLPRAVRNSDGTQSSPAVTTGAPDARPAHSVGGGGNGFAPSPATNATSPRRRQPDASMTLDGAMTSLNVAVGGTRSPRQSPLASPRGSISGPDGHERARSRKNSASNGSGNAAASVVVAGAGTSDAATQPKPSQPPTRGVVRITAVSNSNARTNASASASASASVSAAPVAPASTTPRLQRTISVRSGGPGSTAIVATAANASAAAAAPSTPQRSGAEPKTYKRMVSLQGRHVTNSPFLELDKSMNAGSGAHGSTPRKRSSKASTNPDGTPSRTRSQRQATHRSVFAEGWNGDISSAGIAAVAASLPEGCESAAPAVKQSSAEATEPASVEVPPAPASASRDVPSDAVIPTPTPTIEPRAAPEAVSGPPASVFREAFVQPEQPTAPRTGSARPVPSPRNAYHTPVMSNSATPVTTPLSTPMSQRRNVATGGQAPPTHTMSASTQGAITPSDTAAPPPATSAFRKTTRGSATTPRGSIATPRGSIATPRKSSATSEAGSVSAAHVSATRTRTPRTSDSTADGSNAGNATPTQSGSNGTSNNAPARTPSQRGTPGYANPTRKRTSREDAMANVANGRRGSSNNLLANKGGVPSAASSASAMAPSPSGRRPSVRSSVDSGKAPRTKEASQSTSADRPVSPAPSNSSRVSSASATASTGVRTRAPVAPKPTGRPAAPIVGYRPPVVARVTDARDISLGPQTDQP* # ORIGINAL: g4584.t1 original gene structure, not modified by PASA NODE_340_length_26485_cov_46.7418 AUGUSTUS gene 11399 12498 . - . ID=g4584;Name=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS mRNA 11399 12498 . - . ID=g4584.t1;Parent=g4584;Name=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 12447 12498 . - . ID=g4584.t1.exon1;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 12447 12498 . - 0 ID=cds.g4584.t1;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 12132 12262 . - . ID=g4584.t1.exon2;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 12132 12262 . - 2 ID=cds.g4584.t1;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 11792 11985 . - . ID=g4584.t1.exon3;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 11792 11985 . - 0 ID=cds.g4584.t1;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS exon 11399 11465 . - . ID=g4584.t1.exon4;Parent=g4584.t1 NODE_340_length_26485_cov_46.7418 AUGUSTUS CDS 11399 11465 . - 1 ID=cds.g4584.t1;Parent=g4584.t1 #PROT g4584.t1 g4584 MDRLTNKRRDEDRSMSKGMANQSQANDGSIEGGGYQHAMGAQSQTQPTTTASGISGGALAMGGTENAQVDGHAEARAVDHHARGISGAIRAGGDIIGDTEVFGDDEDQERFHAGESVHSAGIDAAEGDRIRQYYEAERKAYDRTAYH* # ORIGINAL: g963.t1 original gene structure, not modified by PASA NODE_2571_length_5842_cov_41.6437 AUGUSTUS gene 3902 5681 . - . ID=g963;Name=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS mRNA 3902 5681 . - . ID=g963.t1;Parent=g963;Name=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 5421 5681 . - . ID=g963.t1.exon1;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 5421 5681 . - 0 ID=cds.g963.t1;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 5083 5137 . - . ID=g963.t1.exon2;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 5083 5137 . - 0 ID=cds.g963.t1;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 4753 4902 . - . ID=g963.t1.exon3;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 4753 4902 . - 2 ID=cds.g963.t1;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 4323 4473 . - . ID=g963.t1.exon4;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 4323 4473 . - 2 ID=cds.g963.t1;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 3902 4031 . - . ID=g963.t1.exon5;Parent=g963.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 3902 4031 . - 1 ID=cds.g963.t1;Parent=g963.t1 #PROT g963.t1 g963 MSSTPSGSRPSSARPSSAHRSARPSSASRGDGPYSSWARPTSASSTGPRPSTTAGNALTREESWQNGTTPIEALVPRSVKELRDAKETLSTGRDVVDFFASNSHRGVMEFVYLQRAPSTAYRPYDLIVVPKDKIGQEHYVMSPSGVIHVQPDEPTEVMTLADWVHEATLFNAVSKLSFFKNYLQYKTFQAWRRYLRLKTYRRKRDNFPRILLQAMPIFHKTIIDVHSALIDGVADLRFIVINESLTYT* # ORIGINAL: g962.t1 original gene structure, not modified by PASA NODE_2571_length_5842_cov_41.6437 AUGUSTUS gene 346 3555 . - . ID=g962;Name=g962.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS mRNA 346 3555 . - . ID=g962.t1;Parent=g962;Name=g962.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 1234 3555 . - . ID=g962.t1.exon1;Parent=g962.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 1234 3555 . - 0 ID=cds.g962.t1;Parent=g962.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS exon 346 972 . - . ID=g962.t1.exon2;Parent=g962.t1 NODE_2571_length_5842_cov_41.6437 AUGUSTUS CDS 346 972 . - 0 ID=cds.g962.t1;Parent=g962.t1 #PROT g962.t1 g962 MCTPIFPITTEFCRSLQEFEDLRTSSFKRAVEALNALGAKVRGIVEQTCLGILTRLAGEAQRIVLPSYNSKVTSMHAEKRAFKEGIKAAKDARAEADLIGRLVRVCELMVDEVIATHTVTILSGDFYEAFVNHKRKRPLIRIKAAYGADEIVFVPPRRRVCAAVSDAMRTVVATLGKFPRISDLPTLQHAVAPSSEAGSLQPLMLRLGGRREFTEPIIKVEGAMSVSFDEAQQHAQTFSILWDIHVVVRDWTDETFESSVYDAAQFRDWIDKTTAWRAEVHKVDANFKSANFVLLLEANELRTSLEPRLESVSASIQRSLCRRSLTATEKLKSDLEEACVALSARPETLEEFGDYASRLSDIATGEGAFKASLDRVGSLHQVIVVRGVEHSTEARVSYSQLSASWMQYQNKLQEARAFEDEQVPLMRQSIEGTSEGLEEELIRLQNVLKTGMSSEFRGIPSAVLRHLAEVGEELADITARSGELQKWRTMFKCSATEEVRLALCAQELAARREVWTLREAWKETTSSWMRSAFRTMDLAGMKKQLETWSVSSTRLTVDRPNDIVAYHLNTDVEKLRSAVPVLLDLGSQAMKTRHWKEVFVVLGRTYNANREYTLEDLLQYDVVDKAPAISRIVGIATAEYALETALDKIRTTWDMTRFRLVGRQSELARNLASFDVNPGVAAAPPMRMTSQKSMASMNLTGRSTPSAGTAPMSSSNSTLPVDPADIAKLSKEAQAELCVIAGLDEMQAAVEDHQITLAAMLTNKAVGEIREEVEAWEKHLSLLAEILDAMGQMQRKWIYLDAIFSQPDMRSQIPVSANKFIIIDRKWRGFTESIRTQPLAISLATRRGGSKSTRPEFEGEALLRMLADGDKQLEEIMRTLDDYLETKRHVFPRFYFLSNDELLDILSHPGNAHAIQSQVRKCFDGVATLYVRDVANLEAGGTQQVVVGVESSTREVLLLESVVKAIGPVEEWITHVDQAIKST # PASA_UPDATE: g12501.t1_g12502.t1, single gene model update, valid-1, status:[pasa:asmbl_6126,status:3], valid-1 NODE_348_length_26325_cov_46.4033 . gene 4647 8596 . - . ID=g12501_g12502;Name=MERGED%3A%20g12501.t1 NODE_348_length_26325_cov_46.4033 . mRNA 4647 8596 . - . ID=g12501.t1_g12502.t1;Parent=g12501_g12502;Name=MERGED%3A%20g12501.t1 NODE_348_length_26325_cov_46.4033 . five_prime_UTR 8551 8596 . - . ID=g12501.t1_g12502.t1.utr5p1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 8145 8596 . - . ID=g12501.t1_g12502.t1.exon1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 8145 8550 . - 0 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 7729 8005 . - . ID=g12501.t1_g12502.t1.exon2;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 7729 8005 . - 2 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 6384 7587 . - . ID=g12501.t1_g12502.t1.exon3;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 6384 7587 . - 1 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 6089 6208 . - . ID=g12501.t1_g12502.t1.exon4;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 6089 6208 . - 0 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 5770 5965 . - . ID=g12501.t1_g12502.t1.exon5;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 5770 5965 . - 0 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 5411 5673 . - . ID=g12501.t1_g12502.t1.exon6;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 5411 5673 . - 2 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 5107 5268 . - . ID=g12501.t1_g12502.t1.exon7;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 5107 5268 . - 0 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . exon 4647 4849 . - . ID=g12501.t1_g12502.t1.exon8;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . CDS 4676 4849 . - 0 ID=cds.g12501.t1_g12502.t1;Parent=g12501.t1_g12502.t1 NODE_348_length_26325_cov_46.4033 . three_prime_UTR 4647 4675 . - . ID=g12501.t1_g12502.t1.utr3p1;Parent=g12501.t1_g12502.t1 #PROT g12501.t1_g12502.t1 g12501_g12502 MEPPTYLRGANSAGRGRGRQPLSPAASTPRSVVESDALAMGVQGARDSRVLSLVSKPVGRPAASPAASVSQNAAAPFSASTHAERVAVAVAQQKATAAAASAASIYEESSDDSSGEEFDGVAVINATFKNYRGVAGSDAQAQIERTRQLVHDACTAGSQVCLVCIGSIRRADAVWNCSVCFCMYHITCVQAWVRDGIARKELETAANPDLREVGARSDQRDRPRVWCCPKCRAEYDIQTHQPSKYVCFCGKAVDPSPDPWLVPHSCGEVCGRALPGGCGHRCLLLCHPGPCPPCPQMLALPCHCGKLSAQRRCGSKPHSCSSVCAKVLGCGEHRCDKVCHAGVCDECRRTSVQKCRCGKASQLRACNDADYMCGSPCGKTLSCGFHACDKICHVGACGSCKMEGARSCPCGKKSAVLACTDPDVDPCGDSCGRTLACGVHLCVRRCHRGPCDICRHEVERTCRCGATRRRAQCCEGSFQCERKCGRTKECGRHTCKRRCCDGNCPPCEETCGRRLACGNHKCAAPCHSGPCYPCQLTIPVTCRCERSVIEVPCGGEAAAKPPKCRHACSVPTECDHMVADRPPHACHFGRCPRCRLPCAKVHAACGHRCDAQCHVYRPIALPADAIAGKGMLSKREAKEIAKAQPPPPDVRQCPPCTVPVSISCRGKHEVVPMPCSEAREFDCGRACGKPLPCGNHTCDAGCHLPTTNCRPCERACEHPRAEHCKHPCPRMCHAGPCPPCVGTVRVKCHCENVVLSLSCSEYVKAMASAEASARLFSCNAPCSKAKDCGHPCNVVCHAGQCALAASCTKRTAMRCPCKRKKKEFVCREIDEIRRKIGAIAPLLECDEDCEKAKAAVASAEAHAAARLVAEEHKRQQAELELYNRKLNPTGRKRKTKETAPVDRPWLDAVNWSRLGGILVALSLVLLVYWIFNE* # PASA_UPDATE: g12503.t1, single gene model update, valid-1, status:[pasa:asmbl_6128,status:3], valid-1 NODE_348_length_26325_cov_46.4033 . gene 8852 13040 . + . ID=g12503;Name=g12503.t1 NODE_348_length_26325_cov_46.4033 . mRNA 8852 13040 . + . ID=g12503.t1;Parent=g12503;Name=g12503.t1 NODE_348_length_26325_cov_46.4033 . five_prime_UTR 8852 9012 . + . ID=g12503.t1.utr5p1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 8852 9131 . + . ID=g12503.t1.exon1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 9013 9131 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 9313 9434 . + . ID=g12503.t1.exon2;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 9313 9434 . + 1 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 9583 9730 . + . ID=g12503.t1.exon3;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 9583 9730 . + 2 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 9826 10000 . + . ID=g12503.t1.exon4;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 9826 10000 . + 1 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 10288 10423 . + . ID=g12503.t1.exon5;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 10288 10423 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 10832 11049 . + . ID=g12503.t1.exon6;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 10832 11049 . + 2 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 11165 11353 . + . ID=g12503.t1.exon7;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 11165 11353 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 11529 11609 . + . ID=g12503.t1.exon8;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 11529 11609 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 11748 11960 . + . ID=g12503.t1.exon9;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 11748 11960 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 12180 12393 . + . ID=g12503.t1.exon10;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 12180 12393 . + 0 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . exon 12695 13040 . + . ID=g12503.t1.exon11;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . CDS 12695 12828 . + 2 ID=cds.g12503.t1;Parent=g12503.t1 NODE_348_length_26325_cov_46.4033 . three_prime_UTR 12829 13040 . + . ID=g12503.t1.utr3p1;Parent=g12503.t1 #PROT g12503.t1 g12503 MSAEGAKGPTAAVPRRASPVDKAMGYDMPAVDASATKTDKIPNFLSKQFRINKSVVIPPAISSVKPEDELMDLKQKLTLMEGDRRAYFETAQWTIKLNSERIAALREENKDIRTRLKKVQTGSSDSISDGARRSAGDRLEASTIHHRKKLDQVHTANEDKEAELARLRSEWAEIENAVDLSEEPTDVQQLRVIENRLEKALLKSEEATTITVTYKKILHALQEERLAYDQRISAIESQLRQKQREYDELKAMAEDALLARDVMKTELQKAEQGFYEEKKSREKELKDKQEVVRKKLEMRDKSDKKKTPMVDMMEQDGGVDAAKQPIDAEQVRASEEDRDGRLVQYEEAFRKIKGAAGVFDINDVVQKFQAQKETQNHLEELKATYEQEIQRLTELKAKTQTEYEELKFSRASHISQRLVDEFEQRLEDAARKYDARHGEFNRATNILTQAKTGIQHIGDKLSNYMTENNRRLPPMADETVVDILSACDGKLTKLIASLDQFGFEKDKVDLPREFPLPKNNIRIKLPQKDNIEEVLLSTAAVDFDEEESGDDDLLDREGMKKQANSLVEQKRKKKKSKGRKKI* # ORIGINAL: g12507.t1 original gene structure, not modified by PASA NODE_348_length_26325_cov_46.4033 AUGUSTUS gene 20161 21280 . - . ID=g12507;Name=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS mRNA 20161 21280 . - . ID=g12507.t1;Parent=g12507;Name=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 21254 21280 . - . ID=g12507.t1.exon1;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 21254 21280 . - 0 ID=cds.g12507.t1;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 20887 21041 . - . ID=g12507.t1.exon2;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 20887 21041 . - 0 ID=cds.g12507.t1;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 20637 20771 . - . ID=g12507.t1.exon3;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 20637 20771 . - 1 ID=cds.g12507.t1;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 20161 20515 . - . ID=g12507.t1.exon4;Parent=g12507.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 20161 20515 . - 1 ID=cds.g12507.t1;Parent=g12507.t1 #PROT g12507.t1 g12507 MAGVSGKLMAADKVEFVFGKHTVVLEQQPHSNEFGSYLWDAAIVMGRYFDALPPHTFLGTRCIELGAGCGLVGILAGLMGAHVTLTDVEEVLPLLRKNVKQNLGERGSVCALKWGADEETVTLLRDPPPDYIILADCVYSDPNGPNSDYNVRALADAVGALAGPKTVILCGTEIRNQSAHDAFMDGCLKNGLVIERLPPSKLPKSVRGETHVAMYVMRRPSSQ* # PASA_UPDATE: g12506.t1, single gene model update, valid-1, status:[pasa:asmbl_6127,status:3], valid-1 NODE_348_length_26325_cov_46.4033 . gene 18708 19864 . - . ID=g12506;Name=g12506.t1 NODE_348_length_26325_cov_46.4033 . mRNA 18708 19864 . - . ID=g12506.t1;Parent=g12506;Name=g12506.t1 NODE_348_length_26325_cov_46.4033 . five_prime_UTR 19603 19864 . - . ID=g12506.t1.utr5p1;Parent=g12506.t1 NODE_348_length_26325_cov_46.4033 . exon 19387 19864 . - . ID=g12506.t1.exon1;Parent=g12506.t1 NODE_348_length_26325_cov_46.4033 . CDS 19387 19602 . - 0 ID=cds.g12506.t1;Parent=g12506.t1 NODE_348_length_26325_cov_46.4033 . exon 18708 19225 . - . ID=g12506.t1.exon2;Parent=g12506.t1 NODE_348_length_26325_cov_46.4033 . CDS 18968 19225 . - 0 ID=cds.g12506.t1;Parent=g12506.t1 NODE_348_length_26325_cov_46.4033 . three_prime_UTR 18708 18967 . - . ID=g12506.t1.utr3p1;Parent=g12506.t1 #PROT g12506.t1 g12506 MGCGPSKVDVEAPKQAHADAPTKVSGDAPAPAAHEEPKPKSILSAAKEDGPTPSSPGGDAVADMRRQVAKKKVQNANGAVSDDLVWSARRGSMISQSEHQADEVVAKAVANAFRDGARSVHDLRGGGSRSNSSSDLRKAAGSPAGTKRTPLSSEMLV* # ORIGINAL: g12508.t1 original gene structure, not modified by PASA NODE_348_length_26325_cov_46.4033 AUGUSTUS gene 22136 26092 . - . ID=g12508;Name=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS mRNA 22136 26092 . - . ID=g12508.t1;Parent=g12508;Name=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 26035 26092 . - . ID=g12508.t1.exon1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 26035 26092 . - 0 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 25412 25786 . - . ID=g12508.t1.exon2;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 25412 25786 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 24802 25228 . - . ID=g12508.t1.exon3;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 24802 25228 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 24392 24441 . - . ID=g12508.t1.exon4;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 24392 24441 . - 1 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 24012 24176 . - . ID=g12508.t1.exon5;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 24012 24176 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 23747 23796 . - . ID=g12508.t1.exon6;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 23747 23796 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 23332 23455 . - . ID=g12508.t1.exon7;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 23332 23455 . - 0 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 22937 23068 . - . ID=g12508.t1.exon8;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 22937 23068 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 22570 22691 . - . ID=g12508.t1.exon9;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 22570 22691 . - 2 ID=cds.g12508.t1;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 22136 22405 . - . ID=g12508.t1.exon10;Parent=g12508.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 22136 22405 . - 0 ID=cds.g12508.t1;Parent=g12508.t1 #PROT g12508.t1 g12508 MLRWAHSPWNRKQLSSTARSQLFSAKLANVQQNATAAPTTQRSVCSFAYSNNTAQLQPVRFFATFPIESVASVSIVDVHSQTPVFSLQKASAILFQFTGNIVEFGQVFNLTQTDADSLYTGDLACHVQLVDNATWQGTMQLVEKGTVYLGRWRNTNVAIKECSLLASVAPKRLIGIDSATASDASRDSVLVGQVRAAIANRRVSRHSMGDVDSGIASDQSAEANSDPRGRVAEVSDSDTIGHSVKRSIRHMSSLVSRTTERSRSLHGLNEDEKNAMLTFEAEIDIMCSLRHPNLLLYMGYCAPPHLAIVTELMSNGSLADRLHNNDPAVLDWRRRVAIIVDIALGMTYLHLHSPPIIHGDLKSMNILLDVNFTAKVADFGMTTTRELLDTTHIDDMGTQFWSAPEVLQGLRYTSKSDVYSYSIVLWEVATCKTPYSDVCLTRDLVNREDREVVLYEIVNCGLRPTLPDRIPPRFYLLMVMCWNASESDRPAFNDILKWFEMTHVEDAGYTEPLQLEEAQAQALALAPVVQPVHAPITEIPSVNKDSPDDADCEDAESLYYAEEDHPDKSVFAAHDATDAAEGQPFGDVDA* # ORIGINAL: g12505.t1 original gene structure, not modified by PASA NODE_348_length_26325_cov_46.4033 AUGUSTUS gene 15959 17965 . - . ID=g12505;Name=g12505.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS mRNA 15959 17965 . - . ID=g12505.t1;Parent=g12505;Name=g12505.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 15959 17965 . - . ID=g12505.t1.exon1;Parent=g12505.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 15959 17965 . - 0 ID=cds.g12505.t1;Parent=g12505.t1 #PROT g12505.t1 g12505 MLPFASHGRICARQCGVALQLLRHVPAKRILTIDRHYASLSSPLSRGPLRSTWIDLSHYFLKRRASAVTSVRSVSSPALRSSRALFSAAAFVVAPAVGDVRASALSSKPGVVSDPRAITPTGRVGVHHQVPCDPRDGTNRPYVTVHGAIALVRLFARTCGISLRLGPVMLLYPLCWLGSAWKDRWWRMLLLAIQCCGPLFIKLGQWASTRRDLFSEEFCERLSVLHSGTRPHRVTHTLKALDEAGLGDAIVHIDETPIGSGCIAQVHRAIMRINGEDVQVALKVLHPGVRSNICIDLEIFTLAARVAEYVPYLKWLGPTDAARQFGDVMWAQLDMRIEGRNLARFRANFEGDCTVAFPRPYLDLSTDSVLVETFEDGIQMEDFVRLGSTPLGNRLAAHILQAFLKMMLLHNFVHADLHPGNILVRYEKEGAPASVPSPATPSSGLNKRAGDTTAVRSDDGSCPAAAAAVQTAIARATMDYAHDVAHEAVARDMPRGMEARLIFLDAGIVTELSDRDKNNFLDLFSAIAYGDGKRAGELMIERMPGDPSLVINADGFKEEIGSLVSRVRRETLTLGKMKVGDILGRVFELVSQHHVRMEGGFSSLGLGIMVLEGLGRSLDPNLDLLTSSIPILARIDKNVVVTLATQGLNWFFSRLTALDMMMTIPPDA* # ORIGINAL: g12504.t1 original gene structure, not modified by PASA NODE_348_length_26325_cov_46.4033 AUGUSTUS gene 13597 14610 . + . ID=g12504;Name=g12504.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS mRNA 13597 14610 . + . ID=g12504.t1;Parent=g12504;Name=g12504.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 13597 14610 . + . ID=g12504.t1.exon1;Parent=g12504.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 13597 14610 . + 0 ID=cds.g12504.t1;Parent=g12504.t1 #PROT g12504.t1 g12504 MPAADVVHPFLATKHVDYLGSFRIGSRDYEQVMTAHLRMSGIYWTITALDVLNSLDKLPRADIVAFVRLCQRPSGGFAAGPGHDEHLLYTLSAVQILCTYNAVKEGCDADAVVAYVKSLQQADGSFAGDRSAAVEIDSRFSFCALACLSLLGRLDDVDMDAAVAFIVRCRNFDGGFGRIPGSESHAGQVFCCVGALAIAESLRHIDCDQLGWWLCERQLSSGGLNGRPEKLPDVCYSWWVLSALAIIDRLHWIDQSKLRSFILAAQDAAAGGIADRPGDIADPFHTLFGTAGLSLMGEGGLKKIDPVYCLAAEVVAAHAKKRERKRAKYSQVCGESQ* # ORIGINAL: g12500.t1 original gene structure, not modified by PASA NODE_348_length_26325_cov_46.4033 AUGUSTUS gene 1124 4353 . + . ID=g12500;Name=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS mRNA 1124 4353 . + . ID=g12500.t1;Parent=g12500;Name=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 1124 1316 . + . ID=g12500.t1.exon1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 1124 1316 . + 0 ID=cds.g12500.t1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 1412 2443 . + . ID=g12500.t1.exon2;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 1412 2443 . + 2 ID=cds.g12500.t1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 2593 2767 . + . ID=g12500.t1.exon3;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 2593 2767 . + 2 ID=cds.g12500.t1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 2920 3232 . + . ID=g12500.t1.exon4;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 2920 3232 . + 1 ID=cds.g12500.t1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 3370 3472 . + . ID=g12500.t1.exon5;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 3370 3472 . + 0 ID=cds.g12500.t1;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS exon 3662 4353 . + . ID=g12500.t1.exon6;Parent=g12500.t1 NODE_348_length_26325_cov_46.4033 AUGUSTUS CDS 3662 4353 . + 2 ID=cds.g12500.t1;Parent=g12500.t1 #PROT g12500.t1 g12500 MSLPIPVHNDSSTTVPNAGPPCSAAANDWRADNTVVSGDYAHSSSCCRSKHARFDALRHMYRCTEVPFGEPIPLGGMGCDETTRVCGGNAMCFRAVKWPGNDTRCMCASADDPTDGAGNCLWPAGSVPTGMHVFWDASLEHTRPKDPALSCDTRRGEPFGDFTKDKSFFPLPLLKCMETLCECVSPDDPHYHDTYWSDVRCAECWSSGDRKVPNGLRLFAPRFGGSSCMSSFSGDMRDGKFGLCSCPSPDDPQHANNSCAWDKKSVPYGARTWETAYCTTGWSVRDGEWDRCACASPNDPKDNADRNITCQWTTPRSVPHKSRVPKDMMAFCASGYGVPVAAESNELECTCPSYDDEAIEDGDVSHCVWGFGMVPPGHRVHDLRACFFQPASNVTTIEQISDLVLKCPDLYNASGEMLVEDVNLFGRIQGLVDSQESDKYWEFAKGSPEEAAYRTVSHVISRRDDIRALYASQGVGAADMAPSWEGRIDEDNFADTIFKIVNDTESEYHNPECGHACVERVLHVLRAEFVAVRMLHSSLMTAKLAHDTHSDIVQSNIDYAKESVKAQDDNAVNSPPGGMAMAYLDMFLNVLGSLPVVGSAAAFTASIFEGVGNIIANDNDKSYDASAPLEAAVAQLKSVMQDRHMALHAKYAKQLETLAENPLRVRMFGAVLQNAGVASDFEIVNNIRNSMKAVRSSLVRLLMPAKWQICFYETCRVEKSYDPMFPGEIWTCPCGKRASYSVGRTYDVKGLVDHPPGCGETHCGGSLFAWMCPNGHFDGGTLADLQMYTDAGLAEASKPEDAERLLIERVLKNEWDDLKRMGFGKFEVPRPCEIK* # PASA_UPDATE: g3145.t1, single gene model update, valid-1, status:[pasa:asmbl_6212,status:12], valid-1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . gene 1916 3211 . + . ID=g3145;Name=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . mRNA 1916 3211 . + . ID=g3145.t1;Parent=g3145;Name=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . five_prime_UTR 1916 1967 . + . ID=g3145.t1.utr5p1;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . exon 1916 2205 . + . ID=g3145.t1.exon1;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . CDS 1968 2205 . + 0 ID=cds.g3145.t1;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . exon 2567 2943 . + . ID=g3145.t1.exon2;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . CDS 2567 2943 . + 2 ID=cds.g3145.t1;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . exon 3131 3211 . + . ID=g3145.t1.exon3;Parent=g3145.t1 NODE_3557_length_3211_cov_44.7529_potentialcontaminant . CDS 3131 3211 . + 0 ID=cds.g3145.t1;Parent=g3145.t1 #PROT g3145.t1 g3145 MKIRAITLGVSFGPSSDVASDISSAAGVLGRIRSRIEVAGHVVQTVRVATNSFEDYVDAGNKEATLAKMMAIDAACSANGISHFSVGPATTIVGIRMVEDIILSTSNLSSSIRIPSSIECDDISVVCAEAARVVVSVGNRTQGNGNFRLCTASNLPPGTPYLPAAHHENGAARMFWIGFESGDALATAFGDGSARTAKQMETKLRDTLAAAMVPVDLLAATIASEEGIEVG* # ORIGINAL: g12016.t1 original gene structure, not modified by PASA NODE_1972_length_8265_cov_60.5612 AUGUSTUS gene 959 8089 . - . ID=g12016;Name=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS mRNA 959 8089 . - . ID=g12016.t1;Parent=g12016;Name=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 7922 8089 . - . ID=g12016.t1.exon1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 7922 8089 . - 0 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 7614 7644 . - . ID=g12016.t1.exon2;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 7614 7644 . - 0 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 7131 7381 . - . ID=g12016.t1.exon3;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 7131 7381 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 6633 6990 . - . ID=g12016.t1.exon4;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 6633 6990 . - 0 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 5340 6326 . - . ID=g12016.t1.exon5;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 5340 6326 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 5018 5173 . - . ID=g12016.t1.exon6;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 5018 5173 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 4506 4617 . - . ID=g12016.t1.exon7;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 4506 4617 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 4284 4370 . - . ID=g12016.t1.exon8;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 4284 4370 . - 1 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 3996 4069 . - . ID=g12016.t1.exon9;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 3996 4069 . - 1 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 3501 3660 . - . ID=g12016.t1.exon10;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 3501 3660 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 3334 3368 . - . ID=g12016.t1.exon11;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 3334 3368 . - 1 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 2605 3208 . - . ID=g12016.t1.exon12;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 2605 3208 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 2265 2370 . - . ID=g12016.t1.exon13;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 2265 2370 . - 1 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 1516 1663 . - . ID=g12016.t1.exon14;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 1516 1663 . - 0 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 1251 1349 . - . ID=g12016.t1.exon15;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 1251 1349 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS exon 959 1104 . - . ID=g12016.t1.exon16;Parent=g12016.t1 NODE_1972_length_8265_cov_60.5612 AUGUSTUS CDS 959 1104 . - 2 ID=cds.g12016.t1;Parent=g12016.t1 #PROT g12016.t1 g12016 MPVPKLKAHAGAAAAFALTAISLLALVAQCEAQRTITFGLLISTSAGVRERSEHLRMCVNHINNKTDGYWDDLLPNITFAYITNTTGACAPNIALNSAVWQVLTANLFAVVGPACSGDTEIVAQLLALGNFRRPQISYSATSPKLADKKSFPFLMRTTLSDDFQGRALAELCIYHGYRRVAVLKSDSAYGQGISLVFLQQAAILGITVVAHESFVEFSTDDVSTQLGVIKQQNARVVLLFAQAVDAYHVFRQALNKGMMTTQYQWIGSDVTMSDQSFQYKLANGTTVNDEAVRTAMFGLIGVQPATGYGDRFGPYMQLWQNSPSYFDADGDRTTVNAYGPATYDACVTLALGVNATLNQGKLETDPDALLANLKNVSFLGVSGDIAFDANGDRISGRYNVLNFNRTLGQPIGTWVSSGGLVYLRAPVFSNFLTVPPIDGSCPNDCIGEGLCDVNVGRCTCNTGRTSPNCSVVAPEALSEQATQNTIPCGRIAHYKAIAATIGSTLTFKLKTGRDVTTGMFDTILYVRRGGSLLSANVSLPEFAPTLDPANTDLQVIVVHILTASDLGSYYVDIFGSGRSCPANYRVEYLLGLPPVPGTDYTATIAGAVAGSVSGLIALTFIVVIVYRRKKFEDDLRNMSWRVMWSDVQISGSVMGSVASAKGSMMSVGAHSESSSHQGHQRFLPMGKWKETVIAIKKLNISTLQMDRELLLELKQMKDIDHPNWARFIGACIDQPNVCILLEACSRGSLQDVLANQAYKIDWLFKYSMALDLAKGMAHLHSSPFQSHGRLKSSNCLIDSRWVLKITDYGLHGLRSRVVTDKSEAEGEYAQYARLLWTAPELLRETVPTPAGTGEADVFAAGIIMQEFVTRELPYFERAAEPRVIVEQVRDSCLRPQRAEDCPAALWTLMEECWADEPAARPSFASIVSRLHKINPEKGSVVDNMAKMLEKYANHLESLVEERTQELAAEKQKTEELISRMLPPSVAESLKRGSKVEPESFGCVTLFFSDIVGFTDIAGKSTPLQVVDFLNDLYTCFDSIIDNHVASGLPIRNGNRHAGEIATMALDLLCATTTFTIRHIPGLTLQLRVGLHSGPVVAGVVGLKMPRYCLFGDTVNTASRMESGGYALRIHMSESTTDILRNVGGYQIELRGTLAVKGKGDMTTYWLAGKDGWTK # ORIGINAL: g13317.t1 original gene structure, not modified by PASA NODE_420_length_24123_cov_39.7067 AUGUSTUS gene 21366 23973 . + . ID=g13317;Name=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS mRNA 21366 23973 . + . ID=g13317.t1;Parent=g13317;Name=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 21366 22485 . + . ID=g13317.t1.exon1;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 21366 22485 . + 0 ID=cds.g13317.t1;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 22818 22891 . + . ID=g13317.t1.exon2;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 22818 22891 . + 2 ID=cds.g13317.t1;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 23207 23347 . + . ID=g13317.t1.exon3;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 23207 23347 . + 0 ID=cds.g13317.t1;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 23759 23973 . + . ID=g13317.t1.exon4;Parent=g13317.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 23759 23973 . + 0 ID=cds.g13317.t1;Parent=g13317.t1 #PROT g13317.t1 g13317 MASGGPDFRSLLSQASSLHRSLRRSLKTQNPTHSTIVDLRRNIRDTYERAIFADYPASLAADCERHLWKSLHGVIERLRALLRDAQARDSAERKSGSAKKSGHPPKRPSAREEVQQLSTAFGALLDESTSFYTMLINRFVEHFELDLAGTESTVAAITPEFSESQARVSAGVRPDASVDSDAYVAAPVLTPVEVQWQAYLSVARCHVGLGDLARYRDMQLRGDASSSHTGARTMYRLANRIAPFDGTAHNQLAVVATYMSDELGAAYHNCMSLSFQRLFEAAPDNTRRCFELARSARLKAKDADMGQDVSSRRARYILHFLATAGDLFVEDAAISGNAVDYVALTTDVECLAEFDALRIAVVAVFIEWRCHLKASDLCAKAAGLGLSLLSSLCEYGQKWKERGLGHPPYVSAIRILCDWVVLSADRLFASGVTAVDDATALVKPLIHLINSVTTSNAWSSKVHRAAMTPFAVRMTHSRPGTQDDVELWGFGPLRALQRKTDYAASARDSKDMQIRH # PASA_UPDATE: g13313.t1, single gene model update, valid-1, status:[pasa:asmbl_7100,status:12], valid-1 NODE_420_length_24123_cov_39.7067 . gene 169 3366 . - . ID=g13313;Name=g13313.t1 NODE_420_length_24123_cov_39.7067 . mRNA 169 3366 . - . ID=g13313.t1;Parent=g13313;Name=g13313.t1 NODE_420_length_24123_cov_39.7067 . five_prime_UTR 3236 3366 . - . ID=g13313.t1.utr5p1;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . exon 3218 3366 . - . ID=g13313.t1.exon1;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . CDS 3218 3235 . - 0 ID=cds.g13313.t1;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . exon 2643 2804 . - . ID=g13313.t1.exon2;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . CDS 2643 2804 . - 0 ID=cds.g13313.t1;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . exon 511 2518 . - . ID=g13313.t1.exon3;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . CDS 511 2518 . - 0 ID=cds.g13313.t1;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . exon 169 347 . - . ID=g13313.t1.exon4;Parent=g13313.t1 NODE_420_length_24123_cov_39.7067 . CDS 169 347 . - 2 ID=cds.g13313.t1;Parent=g13313.t1;3_prime_partial=true #PROT g13313.t1 g13313 MNYIGRILSGAKEFYKDLNPATLSGAIDIVVVEQPDGSLACSPFHVRFGKLHILRSKEKVVDIEVNDEPVDVKMKLGDAGEAFFVKHSAVSASAVPAYLVTSPLPRPSSPDSPDMEPLSIGPSAVPEASLSLGPAATAPASGGTDSIPASPASDSGFDYAFGADGKPLTPTGEAWTWGWGDLPAHAKDALGAAPHADAAAPTTSTSLPASSAGLLSSKSESEIISVKTTVGFDLPAEGQESTSSFPTAPDAAASSGAGEGGVVEGVSAAAAAQARLAQAHSKGSWMGSIMNMLRKPEGPNPQSSPDVALASTSAPSLSSGAMKTAVAAAVKVREDEDLEGGVYLSELSPDQESKYFDDIFDGFGEDDYEPKASFLRSRSPEGQSALVTEAHAAPSADAAGRIPGVGRASSALSDTHGDPISRQTSLTVSKAAEGGVDSSWPPAGGLAAGPFEAAALADNDIPILSLCGVPADGCQPTQDAFLRERIDFVRLCGRPDLIANPNLVVLYGGKYYTARAALPLLVSLSAFGRPLPRDVLQHMAPELRSRDIPRSQSERKGWLWGRWSAGDDRSSGNMGASAESLLVATPSANAADTQLPTGRGSSPMLASAAVVQQVDSVSVAMGTVRAPGLAGARSDSEASLMSTGESYVKTLCLDSDQLKELRLRPGANTIKFSVTTKLQGTATCVSSIFFWRHDAKIVISDVDGTITKSDVMGHILPALRMDWTHSGVAGLYSGMKKNGYEILYLSSRAIGQANITRGFLKGVRQGEITLPDGPVLLSPDRLLTSFTRE # ORIGINAL: g13316.t1 original gene structure, not modified by PASA NODE_420_length_24123_cov_39.7067 AUGUSTUS gene 18096 20237 . + . ID=g13316;Name=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS mRNA 18096 20237 . + . ID=g13316.t1;Parent=g13316;Name=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 18096 18184 . + . ID=g13316.t1.exon1;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 18096 18184 . + 0 ID=cds.g13316.t1;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 18524 18728 . + . ID=g13316.t1.exon2;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 18524 18728 . + 1 ID=cds.g13316.t1;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 18939 19106 . + . ID=g13316.t1.exon3;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 18939 19106 . + 0 ID=cds.g13316.t1;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 19503 19638 . + . ID=g13316.t1.exon4;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 19503 19638 . + 0 ID=cds.g13316.t1;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 19921 20237 . + . ID=g13316.t1.exon5;Parent=g13316.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 19921 20237 . + 2 ID=cds.g13316.t1;Parent=g13316.t1 #PROT g13316.t1 g13316 MSPELYSLLFTKILPSFGVVVSVALSLSPMPSVLRIMRTGEGLGGLNPIPFPFLFSNALGWLAYGAVQHDIMIILPNVIGGILSLFYITVCAEHGNQRERFTNRIIAFSTLTILGTVVVLGMFVVKSAHTQLLMYGFTTNAILICFFTSPLSGMVQVVRMRDASSISLPIAIASLVNCVLWVAYGVGKTDPFIYVPNGIGLASSILQLFLKMIFRNSDAYENLKGSPVPDRSSWSSATSGVCQPASTSPKVKALGPLDALDGIASSGDAYDVAVVVRDQARDSRDRRASRRESVSAVSAPVRLS* # ORIGINAL: g13314.t1 original gene structure, not modified by PASA NODE_420_length_24123_cov_39.7067 AUGUSTUS gene 4113 6387 . + . ID=g13314;Name=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS mRNA 4113 6387 . + . ID=g13314.t1;Parent=g13314;Name=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 4113 4247 . + . ID=g13314.t1.exon1;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 4113 4247 . + 0 ID=cds.g13314.t1;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 4438 5049 . + . ID=g13314.t1.exon2;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 4438 5049 . + 0 ID=cds.g13314.t1;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 5250 5542 . + . ID=g13314.t1.exon3;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 5250 5542 . + 0 ID=cds.g13314.t1;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 5678 5852 . + . ID=g13314.t1.exon4;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 5678 5852 . + 1 ID=cds.g13314.t1;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS exon 6163 6387 . + . ID=g13314.t1.exon5;Parent=g13314.t1 NODE_420_length_24123_cov_39.7067 AUGUSTUS CDS 6163 6387 . + 0 ID=cds.g13314.t1;Parent=g13314.t1 #PROT g13314.t1 g13314 MSLSVKEGASLLTILEDDDSSLESIAENFRKTLARTEHFRLGCALSVLLEGHELLSRLPHRISALSILHEMYRGESLGVNPFTPTLLSSIEAAVGRVPTGIAHGLSSSISVGVGGWQVPITPAACPPGSQAADALIEAQFVAQMLFNPPKDLHRRSPRQIATAPPDPTYVFPTAQIRQLAEVVDKKFAELSPLGRSAAFSVAGEAVVDPSQYASGAAVEKLLSMPMALTLPALAPVFARPVPPLYAPSEDEIVWLNPTDTVPLVEWDVTMCTDNSRGAEIRSLVAKAFRGPLTPQQQQAVQAGLETNPKLVYHIGLTPARLPELVENNPFVAIEVLLRLMSSNQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPTEFVHLYITNCITTCETIKDKYMQNRLVRLVCVFLQSLIRNGIINVQDLFIEVQAFCIEFSRIREAASLFRLLKSIDALPSDAGGDSAAAQGASAGAAADAASQ* # PASA_UPDATE: g13315.t1, single gene model update, valid-1, status:[pasa:asmbl_7101,status:12],[pasa:asmbl_7103,status:12],[pasa:asmbl_7104,status:12],[pasa:asmbl_7105,status:12], valid-1 NODE_420_length_24123_cov_39.7067 . gene 7217 15610 . - . ID=g13315;Name=g13315.t1 NODE_420_length_24123_cov_39.7067 . mRNA 7217 15610 . - . ID=g13315.t1;Parent=g13315;Name=g13315.t1 NODE_420_length_24123_cov_39.7067 . five_prime_UTR 15349 15610 . - . ID=g13315.t1.utr5p1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 15183 15610 . - . ID=g13315.t1.exon1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 15183 15348 . - 0 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 14745 14876 . - . ID=g13315.t1.exon2;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 14745 14876 . - 2 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 14338 14456 . - . ID=g13315.t1.exon3;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 14338 14456 . - 2 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 14030 14138 . - . ID=g13315.t1.exon4;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 14030 14138 . - 0 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 13738 13798 . - . ID=g13315.t1.exon5;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 13738 13798 . - 2 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 11370 13557 . - . ID=g13315.t1.exon6;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 11370 13557 . - 1 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 10283 11161 . - . ID=g13315.t1.exon7;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 10283 11161 . - 0 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 8830 10141 . - . ID=g13315.t1.exon8;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 8830 10141 . - 0 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 8414 8586 . - . ID=g13315.t1.exon9;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 8414 8586 . - 2 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 7960 8272 . - . ID=g13315.t1.exon10;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 7960 8272 . - 0 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . exon 7217 7719 . - . ID=g13315.t1.exon11;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . CDS 7652 7719 . - 2 ID=cds.g13315.t1;Parent=g13315.t1 NODE_420_length_24123_cov_39.7067 . three_prime_UTR 7217 7651 . - . ID=g13315.t1.utr3p1;Parent=g13315.t1 #PROT g13315.t1 g13315 MAPPSNGVHIVQAEVTLVVTSMRRNQRWSSYQQNEERDPILQRFASLKELLTITSDLHSVDIGELIIPFLEVIRSEETTGPITGVALSSVNKFLSYGIIDPHSPHASRGIRLIADAVTNARFPATDAVTDEVVLMKIVQVLRTILMTPIGHLLSDDAVCEMMQTCFRICFQKRLSEVLRRSAEQTLVDMIQKLFGRLDEFVGTDGDGNTASISAASVLKRSASVGAKVPEGVLLAAQIAPALALQGGDAAHASPPPSGGNDGPHSSASVASRGGSAGEEPHSPTGHSDAEADGYDVVIVASDIASHQPSLGSQPIAHVAADGTAIVAPEAAATETTGDLSSGPASSASANNSSGSSNSNNGQSDAFINRQGVRFSSQEALAVELAAAMDRPLTPSSADALDERTLVPHGLPCVRELLRFLISLADVTDKNNSDTMLQMGLSLITVALESGGHLIARHASLMELIRDKLCRCAFRLMGADSVPLFLLALRVCFLLFEGLRAGLKFQLEAFVNILMARIGSDLHPGPVGGSRGPPQQAGAPAMNALPVGPVEIQELALDCLVQMCRIPSFVAELYLNYDCDLYCSNLFELLAKFLSKNAFPAHGSLYTTHVLSLNALLAVVDSIEARCHDAKTQPRSGAMAALHSLAVAAKDALVTAAGSLVVGGNRLGDSDKGSRGPLPDSVAGFGTERPARRPVPRKLESCGPPSLDPQHLPTAEELIEHRQRKKLLVAGAEQFNIKPRKGIQFLQEHGLLTEPIDPVAVAEFLRNNPRLDKKMIGEYIGDKNNIEVLRAFVTSYDLAGLRIDEAVRLLLESFRLPGEAQIIDRIIECFADRYYTMNRDSHRNIADRDSAYILAYAIMQLNTDQHNPRVKKPMTIADFIRNQRGVNAKGDYPPDFLELIYNSIKTREIVMPDEQMGAVRDDYQWKVMLQRSASPAGTYLAAHSSAYDQDVFLLAWGPAIAAISYVFETAMDEIIVQRAIAGFRKCAVISGHYGLCDVFDNLVISLCKFTTLLTPPPHGLIAAGGGGAATATGASHLVYDQAAVAFGRNLKAQMAAQTVFALTREYGNMLREGWKNILDCMVQLYRLRLLPKAMLEAEDFADPSGRVPLQRQRQPMEAQRNRGDSSLWSAMSYYLSLSSEPSTDELAADDVAARTRAVECVAECRLEELIAESRFLSSESLREFVKALVFASQGPLAHAALGTQYDADAAVFFLELLVEVTLRNKDRIDILWETVREHLLGIATLSLQPSVHAVQHVHPISVASQHGAAVHLASSGSSSHIAPDAQPMVVVTPLALPSGPSPTPTANSNPNATPNANSNTAGYPPTSSAAAAASSASSAWHVERAVVGLLRIGIRLFHKERMGDEILGALRRLASAGRALEWEGVRFQLASGLQALLKANGALIKRADDWETVFVLLDGARLHPKARTSAFDALAYIVTDAEHIRRSNFGLFVAALNSIAFVPPPTAAAGASIASASGGSVAAGRSQSPPSSSPHLAHHPASQHMAAPGSAGHALSQTASGGQPQQVTPLGVPHALVSVPALLEVLAVLYSRVPSLVAEGPVYPDEIARVQRVAGLAPSPLSGASPAWHVFWCPLLRMMAQLCCEPKRELRQAALTLLQRSLLSPEMRTLSPADWEACFADVLYPLLSWLLDPALSAGDPTSIDETRMRASALACKVFLLHLNLLLTLPAFSRLWLHLLDFTHMYMRADNSELLAEAILESLKNMLLVMSTSGILVDPSSPSPRKHNGNGGGIELQVSQQAQLWEVTWTGIGKFLPSLRGELFPSSIPQAPPQHVQLPSDSHVDVAAAAAAAPQAKGQAPAPRQGQRAPEFSRAAAVVNI* # ORIGINAL: g12406.t1 original gene structure, not modified by PASA NODE_4569_length_1451_cov_33.1933 AUGUSTUS gene 1022 1378 . + . ID=g12406;Name=g12406.t1 NODE_4569_length_1451_cov_33.1933 AUGUSTUS mRNA 1022 1378 . + . ID=g12406.t1;Parent=g12406;Name=g12406.t1 NODE_4569_length_1451_cov_33.1933 AUGUSTUS exon 1022 1378 . + . ID=g12406.t1.exon1;Parent=g12406.t1 NODE_4569_length_1451_cov_33.1933 AUGUSTUS CDS 1022 1378 . + 0 ID=cds.g12406.t1;Parent=g12406.t1 #PROT g12406.t1 g12406 MPPPPPPPGPPPPPAPMAPPVLSKNEEKARSGLLGDIHKGAKLKKTVTVDKSKPLIEAPKGSAGGGGGGGGGGGGGGGGGGGGGGMGGGMGGGLFAGGMPQLKGRGGAPGPGGPRECL* # PASA_UPDATE: g651.t1, single gene model update, valid-1, status:[pasa:asmbl_5265,status:12], valid-1 NODE_2936_length_4699_cov_35.0597 . gene 530 4474 . + . ID=g651;Name=g651.t1 NODE_2936_length_4699_cov_35.0597 . mRNA 530 4474 . + . ID=g651.t1;Parent=g651;Name=g651.t1 NODE_2936_length_4699_cov_35.0597 . five_prime_UTR 530 531 . + . ID=g651.t1.utr5p1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 530 647 . + . ID=g651.t1.exon1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 532 647 . + 0 ID=cds.g651.t1;Parent=g651.t1;5_prime_partial=true NODE_2936_length_4699_cov_35.0597 . exon 838 967 . + . ID=g651.t1.exon2;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 838 967 . + 1 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 1199 1360 . + . ID=g651.t1.exon3;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 1199 1360 . + 0 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 1607 1700 . + . ID=g651.t1.exon4;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 1607 1700 . + 0 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 1959 2594 . + . ID=g651.t1.exon5;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 1959 2594 . + 2 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 2956 3260 . + . ID=g651.t1.exon6;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 2956 3260 . + 2 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 3585 3619 . + . ID=g651.t1.exon7;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 3585 3619 . + 0 ID=cds.g651.t1;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . exon 3928 4474 . + . ID=g651.t1.exon8;Parent=g651.t1 NODE_2936_length_4699_cov_35.0597 . CDS 3928 4474 . + 1 ID=cds.g651.t1;Parent=g651.t1 #PROT g651.t1 g651 IGIADEFMKATVRYSVEVAHREVLPINRAGDADAVAKLQTMKDKKIHIFIVGMVRFDAQAFFAAAASLQMSGAGYTFIGPDWSADSVYQAEGSGNTIPAVRALATGSLMIRSQAGYGPMFTKYAAEWLVRTSYFNQNANRAIMHPRGPSVFDAVCTFGYAIDNITRSGGNPRDGALLLDRMKRVSFVGASGNVAFDYATGDRRGERYEIMNLGPTGSMVRVGTWDIVNGFNMTGVVLHAGSTANNTVTTTPIDGKCPGRCAGNGVCDFWLGQCECYDGYTDSSCSTVKAQLIGVGSSRFASTAPCGMFVFYNTTVERRPHVLKISLRTGMGVTARDYGYDVRLVVRASTAASAFNRTLEKSQLSLLSNASNGDQVFTTTGPSGLDTLATMPTDYLIALYGTGRVCPASFIIQADVTYLDTDSGSSNKGLVIGLPVGLGSAIVVLCVVFFVWFHRKKSALIEASRDWQLSLDELTFICKIGQGAFGVVYKGTYRGTVVAIKLIVPSGQSVSNNFRRLFASMEDSKKSVESKDGTSNALLRTLYETVVPAPSSTGDSKKQGRNTASGASGKAFEVRASGGSNGSSKFSMAISRLFRGSQTGQQQLSQNANEQFITEITRCVSLRHPNIVTFMGGLGSLLLSVSGGSFMLWMELDSFCVDGGVLVSRLLSEHRALQT* # PASA_UPDATE: g6401.t1, single gene model update, valid-1, status:[pasa:asmbl_7748,status:12], valid-1 NODE_4955_length_1118_cov_76.4525 . gene 32 1100 . - . ID=g6401;Name=g6401.t1 NODE_4955_length_1118_cov_76.4525 . mRNA 32 1100 . - . ID=g6401.t1;Parent=g6401;Name=g6401.t1 NODE_4955_length_1118_cov_76.4525 . five_prime_UTR 1087 1100 . - . ID=g6401.t1.utr5p1;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . exon 1039 1100 . - . ID=g6401.t1.exon1;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . CDS 1039 1086 . - 0 ID=cds.g6401.t1;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . exon 529 840 . - . ID=g6401.t1.exon2;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . CDS 529 840 . - 0 ID=cds.g6401.t1;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . exon 32 357 . - . ID=g6401.t1.exon3;Parent=g6401.t1 NODE_4955_length_1118_cov_76.4525 . CDS 32 357 . - 0 ID=cds.g6401.t1;Parent=g6401.t1;3_prime_partial=true #PROT g6401.t1 g6401 MAKDATVSPLLAVIEMVIDFVQLLAFPFSAYHQDFPWNRSQTSWFESFVRPFVFETYLDKNRSVFYVVIAIIVLLLANAAFVGYSFSRSKYRMMWTLKLLRTISGLVSTIFFIPFTGILASQLACVPTEACWTGADLIDKILAIVFGIGFIFLAFLVASSVYELDPSSRSVLTRPHSRVDVYYLAVRAVLTIMFSLMTSEKDQWILIIALLIGSITVSIAYTWFQPWY # PASA_UPDATE: g4860.t1, single gene model update, valid-1, status:[pasa:asmbl_9804,status:12], valid-1 NODE_878_length_16332_cov_40.8923 . gene 7921 9453 . - . ID=g4860;Name=g4860.t1 NODE_878_length_16332_cov_40.8923 . mRNA 7921 9453 . - . ID=g4860.t1;Parent=g4860;Name=g4860.t1 NODE_878_length_16332_cov_40.8923 . five_prime_UTR 9420 9453 . - . ID=g4860.t1.utr5p1;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . five_prime_UTR 8977 9013 . - . ID=g4860.t1.utr5p2;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . exon 9420 9453 . - . ID=g4860.t1.exon1;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . exon 8836 9013 . - . ID=g4860.t1.exon2;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . CDS 8836 8976 . - 0 ID=cds.g4860.t1;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . exon 7921 8580 . - . ID=g4860.t1.exon3;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . CDS 8452 8580 . - 0 ID=cds.g4860.t1;Parent=g4860.t1 NODE_878_length_16332_cov_40.8923 . three_prime_UTR 7921 8451 . - . ID=g4860.t1.utr3p1;Parent=g4860.t1 #PROT g4860.t1 g4860 MFGIMSVSARRLSAVPVRGYAAVAEDPVKALVLDAVRKYQADKQANKDAMVKLTAEEKKSFADQIEKYKRLLNIEGEIKVPEQVRKFAQ* # ORIGINAL: g4862.t1 original gene structure, not modified by PASA NODE_878_length_16332_cov_40.8923 AUGUSTUS gene 12462 16126 . - . ID=g4862;Name=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS mRNA 12462 16126 . - . ID=g4862.t1;Parent=g4862;Name=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 15987 16126 . - . ID=g4862.t1.exon1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 15987 16126 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 15657 15821 . - . ID=g4862.t1.exon2;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 15657 15821 . - 1 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 15188 15347 . - . ID=g4862.t1.exon3;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 15188 15347 . - 1 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 14821 14904 . - . ID=g4862.t1.exon4;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 14821 14904 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 14359 14535 . - . ID=g4862.t1.exon5;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 14359 14535 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 13895 14101 . - . ID=g4862.t1.exon6;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 13895 14101 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 13423 13656 . - . ID=g4862.t1.exon7;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 13423 13656 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 13243 13307 . - . ID=g4862.t1.exon8;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 13243 13307 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 12740 13043 . - . ID=g4862.t1.exon9;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 12740 13043 . - 1 ID=cds.g4862.t1;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 12462 12617 . - . ID=g4862.t1.exon10;Parent=g4862.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 12462 12617 . - 0 ID=cds.g4862.t1;Parent=g4862.t1 #PROT g4862.t1 g4862 MNTHMHYAAKHSPFPLCTQPLDVVATQYLIAGSISTPSDDDLKVTITSTERPEGTDAELKRTSHGYSYEHWARKGDRLEVTPLSSKLLFRPARRTVDVDDVATFVEGSVSPAIEGAEVTITTTDESNRETVVSVATDAAGHYRVGPLVDYSKFTVTARKEGYAIVNEGATDFRASRLGGLVVKVVDASHAPLAGAVFSVSGGSYRTNNVSNSEGILRLSNLVPGEFFVRPNLKEYQFKPQSQLVAVVEGEPFSSFEFSATRVAFSCHGTVRSLTGEVERGIVVEAVSIADESDREEATTDAAGKYRIRGLKPSVAYEVRVKVGRPTSESLAAAASAGAARIERATPSSAAISVTDDDVKGIDFIAFRLPNKMDITGHVECPWEFVSTIKVSVYAESAPERPIQTVELGPTRFFEFGSLLLKASNGADGYFVRLESSIGKNGQAYTSQAVPVAAPHVGTTAHVVLKMTPKENSGLHADDFLGNASEDSRDQKGSLLGIVFALLGVVALANFNETKKQIRQILILLRIADAPPEVDRRDVAASFDPALVHASPKRKGTQTNSQRR* # PASA_UPDATE: g4858.t1, single gene model update, valid-1, status:[pasa:asmbl_9803,status:3], valid-1 NODE_878_length_16332_cov_40.8923 . gene 614 1994 . - . ID=g4858;Name=g4858.t1 NODE_878_length_16332_cov_40.8923 . mRNA 614 1994 . - . ID=g4858.t1;Parent=g4858;Name=g4858.t1 NODE_878_length_16332_cov_40.8923 . five_prime_UTR 1902 1994 . - . ID=g4858.t1.utr5p1;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . exon 1826 1994 . - . ID=g4858.t1.exon1;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . CDS 1826 1901 . - 0 ID=cds.g4858.t1;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . exon 1416 1634 . - . ID=g4858.t1.exon2;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . CDS 1416 1634 . - 2 ID=cds.g4858.t1;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . exon 614 1220 . - . ID=g4858.t1.exon3;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . CDS 811 1220 . - 2 ID=cds.g4858.t1;Parent=g4858.t1 NODE_878_length_16332_cov_40.8923 . three_prime_UTR 614 810 . - . ID=g4858.t1.utr3p1;Parent=g4858.t1 #PROT g4858.t1 g4858 MAVESISGTAGACTHVIFDMDGLLLDTEKFYTIVGQKIAERYGKNFEWSLKSKMMGKKALEAGRIYVEELAIPLSAEDFIKEREEQLDIMFPQCNILPGVERLVNHLKKHGIPICVATGSHRRHFDLKTQHHQHLFRLFDFIVTGDDPEIKRGKPHPDLFLVAKSRFAAQPSDGSNCLVFEDAPNGVEAAHNAGMKVVFVPDPNMSRVGVHPDAVIDTLEHFLPESFGLPPYAA* # PASA_UPDATE: g4859.t1, single gene model update, valid-1, status:[pasa:asmbl_9800,status:12],[pasa:asmbl_9802,status:12], valid-1 NODE_878_length_16332_cov_40.8923 . gene 2582 7479 . + . ID=g4859;Name=g4859.t1 NODE_878_length_16332_cov_40.8923 . mRNA 2582 7479 . + . ID=g4859.t1;Parent=g4859;Name=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 2582 2784 . + . ID=g4859.t1.exon1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 2582 2784 . + 0 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 2960 3046 . + . ID=g4859.t1.exon2;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 2960 3046 . + 1 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 3426 3503 . + . ID=g4859.t1.exon3;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 3426 3503 . + 1 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 3932 4065 . + . ID=g4859.t1.exon4;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 3932 4065 . + 1 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 4567 4700 . + . ID=g4859.t1.exon5;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 4567 4700 . + 2 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 4993 5130 . + . ID=g4859.t1.exon6;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 4993 5130 . + 0 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 5390 5449 . + . ID=g4859.t1.exon7;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 5390 5449 . + 0 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 5689 5855 . + . ID=g4859.t1.exon8;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 5689 5855 . + 0 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 6060 6210 . + . ID=g4859.t1.exon9;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 6060 6210 . + 1 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 6378 6547 . + . ID=g4859.t1.exon10;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 6378 6547 . + 0 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . exon 6830 7479 . + . ID=g4859.t1.exon11;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . CDS 6830 7028 . + 1 ID=cds.g4859.t1;Parent=g4859.t1 NODE_878_length_16332_cov_40.8923 . three_prime_UTR 7029 7479 . + . ID=g4859.t1.utr3p1;Parent=g4859.t1 #PROT g4859.t1 g4859 MDPKRQTMRRLDSDPNLVATASQKPTRPSMRGPRETLPQLQLQLKKVADRKSKRLPKDTDLAKAEASLIEQFQIAIDELTRKRIETINYFQKVHEGKILWMNVVQIVYHDYGMLYSNEKHRERAKNFFFLGLSMGVLLSLPDGQQFVRAVAQLIEEYRYHISNPAFKGIVSLTKSNKGVAQNMPSEEDAPVTSEIVFAGNTPQYKYLITTEMNIQVDYYEVMMCLCTTLKQAYEKFKHPNCVSLVLMDAVVKIDTRLMNLVFEFVVHDLSKISKLICKHMVTAFKPRRRVGQPESESSSEDDDPFVLGGPNSGQADADDDDDADDDADDDHEERDMEMAETASVTAGVEDSREPPEVLVARLQELQQALEVSRDTFHRLDDQCTTTARALQELSLRLSSQSKVAAMLEEQKNLHEAYQRDLADSGPDAIVRVRDNFAFLERRSREASAERDRLSAEVASLAEESRALNTQRNTQKPEMMVLMKKVDKVEMQLRRSKETYVNTAGND* # ORIGINAL: g4857.t1 original gene structure, not modified by PASA NODE_878_length_16332_cov_40.8923 AUGUSTUS gene 113 271 . + . ID=g4857;Name=g4857.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS mRNA 113 271 . + . ID=g4857.t1;Parent=g4857;Name=g4857.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS exon 113 271 . + . ID=g4857.t1.exon1;Parent=g4857.t1 NODE_878_length_16332_cov_40.8923 AUGUSTUS CDS 113 271 . + 0 ID=cds.g4857.t1;Parent=g4857.t1 #PROT g4857.t1 g4857 LDFDVFNALDLMENSEFLKELKFGIGDGLLHYYLYNYRCPKLQPSDMGLVLL* # PASA_UPDATE: g4861.t1, single gene model update, valid-1, status:[pasa:asmbl_9805,status:3], valid-1 NODE_878_length_16332_cov_40.8923 . gene 9745 11552 . - . ID=g4861;Name=g4861.t1 NODE_878_length_16332_cov_40.8923 . mRNA 9745 11552 . - . ID=g4861.t1;Parent=g4861;Name=g4861.t1 NODE_878_length_16332_cov_40.8923 . five_prime_UTR 11444 11552 . - . ID=g4861.t1.utr5p1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . five_prime_UTR 11236 11269 . - . ID=g4861.t1.utr5p2;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . exon 11444 11552 . - . ID=g4861.t1.exon1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . exon 11179 11269 . - . ID=g4861.t1.exon2;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . CDS 11179 11235 . - 0 ID=cds.g4861.t1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . exon 10781 10906 . - . ID=g4861.t1.exon3;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . CDS 10781 10906 . - 0 ID=cds.g4861.t1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . exon 10341 10517 . - . ID=g4861.t1.exon4;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . CDS 10341 10517 . - 0 ID=cds.g4861.t1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . exon 9745 10156 . - . ID=g4861.t1.exon5;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . CDS 9959 10156 . - 0 ID=cds.g4861.t1;Parent=g4861.t1 NODE_878_length_16332_cov_40.8923 . three_prime_UTR 9745 9958 . - . ID=g4861.t1.utr3p1;Parent=g4861.t1 #PROT g4861.t1 g4861 MHEYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLAYSITAQSTFNDLTDLREQILRVKDAEHVPMVLVGNKCDLEDERVVGKDQGQGLAKQWGNCTFMESSAKAKINVNEIFYDLVRQINRVDPSSTGSKKAKKGCLIL* # PASA_UPDATE: g13134.t1, single gene model update, valid-1, status:[pasa:asmbl_7435,status:12], valid-1 NODE_4555_length_1463_cov_34.5043 . gene 174 1193 . + . ID=g13134;Name=g13134.t1 NODE_4555_length_1463_cov_34.5043 . mRNA 174 1193 . + . ID=g13134.t1;Parent=g13134;Name=g13134.t1 NODE_4555_length_1463_cov_34.5043 . five_prime_UTR 174 337 . + . ID=g13134.t1.utr5p1;Parent=g13134.t1 NODE_4555_length_1463_cov_34.5043 . exon 174 457 . + . ID=g13134.t1.exon1;Parent=g13134.t1 NODE_4555_length_1463_cov_34.5043 . CDS 338 457 . + 0 ID=cds.g13134.t1;Parent=g13134.t1 NODE_4555_length_1463_cov_34.5043 . exon 714 1193 . + . ID=g13134.t1.exon2;Parent=g13134.t1 NODE_4555_length_1463_cov_34.5043 . CDS 714 1193 . + 0 ID=cds.g13134.t1;Parent=g13134.t1 #PROT g13134.t1 g13134 MATTTPYAFKDNYSKWENIFVKAIETVFADLHPELRVTSDAVSEVERLIYSVLATLCIKPAKSPSEIREIVFKSFPEALHKWVFNAGDDAIKTFRKAPKKLALVSASVFPVAALLEKLQKEVFPSTKIDVECVVYLCATLEYIVSDMLKLAGNYAKNNQKGETRKEHVLAAIENDPVLQTLFRSAQMELAPPLPPKVLC* # ORIGINAL: g2950.t1 original gene structure, not modified by PASA NODE_5343_length_898_cov_25.9417_potentialcontaminant AUGUSTUS gene 2 898 . + . ID=g2950;Name=g2950.t1 NODE_5343_length_898_cov_25.9417_potentialcontaminant AUGUSTUS mRNA 2 898 . + . ID=g2950.t1;Parent=g2950;Name=g2950.t1 NODE_5343_length_898_cov_25.9417_potentialcontaminant AUGUSTUS exon 2 898 . + . ID=g2950.t1.exon1;Parent=g2950.t1 NODE_5343_length_898_cov_25.9417_potentialcontaminant AUGUSTUS CDS 2 898 . + 0 ID=cds.g2950.t1;Parent=g2950.t1 #PROT g2950.t1 g2950 TGTVPADGCDTASASDGGASGGGASGGGASDAGGSGEAPQVPLSKSGRPCSVPTALWTEICAPKCFGAFRVQLTNSGNCGVGKFSQTVEVMTACQTAWNKQKTVSSDEGNRLDRCNNAVKTILESDRHSDKQTTDASAAQCVGLDKAACERRFCKWEGNRCVDSNGDRCSEFTGDKHTCELRGCVVARDDGSCKSHFGFGVKGSKLGVTLNPFKNNKAVDLETLLAAVLPVLFGLVDTISRKNTLEPRKASDRWKLRKEILQFFFNAGFAYYCEKESNRAISDGLCAAIAGNKPVAVCH # ORIGINAL: g3418.t1 original gene structure, not modified by PASA NODE_4431_length_1625_cov_49.3 AUGUSTUS gene 1 1625 . - . ID=g3418;Name=g3418.t1 NODE_4431_length_1625_cov_49.3 AUGUSTUS mRNA 1 1625 . - . ID=g3418.t1;Parent=g3418;Name=g3418.t1 NODE_4431_length_1625_cov_49.3 AUGUSTUS exon 1 1625 . - . ID=g3418.t1.exon1;Parent=g3418.t1 NODE_4431_length_1625_cov_49.3 AUGUSTUS CDS 1 1625 . - 0 ID=cds.g3418.t1;Parent=g3418.t1 #PROT g3418.t1 g3418 RTPGVGIGWLSAPTGAIGEYTNVRCVNCTEELFAIYSVNGQLDDSILPGSPSLYDQMYLDINVVLELIRAGYRFGSDARRRLAGIQIDADNSFMTDNIAFDALVLRVGKIAIIASAPVTSATEISVLSSGRLVLAGVELISSPITVDGLLSVAYATVVDSPITVRGSGWANFENCEFRTQTGRRTTGGDETILTPALVVLSDESFATVTQLQLGTYLATTGNGGFASMSGDSVLTITNGNVQHISTLGSGGFVSVEPVTGSDAATTRLIIRGIDFEQCDSQVHGGFLYLRGNAMASVHDCNIRASSAGGQGGLVSAADTVVLDIRGTNISSTSAGLNGGVFSIIDGASVSLATVAVTDAISASNGGFASLIPTAGSARIPYIVADGLMIDGATATVHGGAFFTSGAQLRITRSSFRGIAAGGSGGFAHFAGDTPSGMLLADSSLSSFHAETRAGLISLTDTSVVTITRCHAASASSTLDGGCIAVGAGRLHVENSEFTDCDAIAGGGGGIFSTGGSISLANCTFSNAKADLGGGVLMMQAL # ORIGINAL: g5804.t1 original gene structure, not modified by PASA NODE_2630_length_5604_cov_39.868 AUGUSTUS gene 3628 5375 . + . ID=g5804;Name=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS mRNA 3628 5375 . + . ID=g5804.t1;Parent=g5804;Name=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS exon 3628 3962 . + . ID=g5804.t1.exon1;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS CDS 3628 3962 . + 0 ID=cds.g5804.t1;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS exon 4118 4612 . + . ID=g5804.t1.exon2;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS CDS 4118 4612 . + 1 ID=cds.g5804.t1;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS exon 4928 5004 . + . ID=g5804.t1.exon3;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS CDS 4928 5004 . + 1 ID=cds.g5804.t1;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS exon 5233 5375 . + . ID=g5804.t1.exon4;Parent=g5804.t1 NODE_2630_length_5604_cov_39.868 AUGUSTUS CDS 5233 5375 . + 2 ID=cds.g5804.t1;Parent=g5804.t1 #PROT g5804.t1 g5804 MDDDELFEDFEGGPLYGEDDLEAEFAELDDSADNFTGTTTRRRSSTGTKAAQTKQDAPVDVKDVGKNGTAGADDATAQATTTTTAATSTPAQPPAPAQSSLLPLPESRKRLLSETDVADEKERRRTKFGEPERVADKFEPNIIVDTRPGRKVPGLDSALPDGPTPAERGRGNYGGGRGGRGGGHNDGGQRNMRGGGGGGWNGGGGRGGYGMPHMQPQHLQHQLAQQQQHQQQQQQQQQQQHMMHRPPMPPHQHPHAQLMHQQQQQQQAHMQQMGYGMPPGAMQGQAGGPMQNQMMQMYQAQMAAAAAASGIYLNPAVMQQMAAMGYPPMMMAGMVPGAMASGVGRAFWH* # PASA_UPDATE: g5803.t1, single gene model update, valid-1, status:[pasa:asmbl_4688,status:3], valid-1 NODE_2630_length_5604_cov_39.868 . gene 208 3136 . + . ID=g5803;Name=g5803.t1 NODE_2630_length_5604_cov_39.868 . mRNA 208 3136 . + . ID=g5803.t1;Parent=g5803;Name=g5803.t1 NODE_2630_length_5604_cov_39.868 . five_prime_UTR 208 268 . + . ID=g5803.t1.utr5p1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 208 333 . + . ID=g5803.t1.exon1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 269 333 . + 0 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 569 695 . + . ID=g5803.t1.exon2;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 569 695 . + 1 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 856 970 . + . ID=g5803.t1.exon3;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 856 970 . + 0 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 1150 1226 . + . ID=g5803.t1.exon4;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 1150 1226 . + 2 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 1482 1637 . + . ID=g5803.t1.exon5;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 1482 1637 . + 0 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 1934 2060 . + . ID=g5803.t1.exon6;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 1934 2060 . + 0 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 2245 2345 . + . ID=g5803.t1.exon7;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 2245 2345 . + 2 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 2651 2751 . + . ID=g5803.t1.exon8;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 2651 2751 . + 0 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . exon 2928 3136 . + . ID=g5803.t1.exon9;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . CDS 2928 2955 . + 1 ID=cds.g5803.t1;Parent=g5803.t1 NODE_2630_length_5604_cov_39.868 . three_prime_UTR 2956 3136 . + . ID=g5803.t1.utr3p1;Parent=g5803.t1 #PROT g5803.t1 g5803 MILLEFGNRIIEETLTNRFENSSKPESVDITVADFDGILFHMSTPESKSKILLSISIKCWDELKGHDVEGLLKRKYGDLIAPTESGYNFTVQYDLEKLPADKEKAIREASLLKRNCLAAPFEKYFAIQEAGGAGGDKTAVIHYRDDETIFISAHHDRVTVVFTTTFKDDDDVVIGKVFLQEFVDARRNVQQAPQVLFTHKDPPRELDGLGARTGDNIGYVTFVLFPRHFGKDKKEDCINLIQTFRDYLHYHIKCSKAYLHSRMRSRVTSLLKILNRARPENITTEKKTASGKTFTRKV* # PASA_UPDATE: g3325.t1, single gene model update, valid-1, status:[pasa:asmbl_7556,status:12], valid-1 NODE_4708_length_1305_cov_34.6862 . gene 55 1288 . - . ID=g3325;Name=g3325.t1 NODE_4708_length_1305_cov_34.6862 . mRNA 55 1288 . - . ID=g3325.t1;Parent=g3325;Name=g3325.t1 NODE_4708_length_1305_cov_34.6862 . five_prime_UTR 1287 1288 . - . ID=g3325.t1.utr5p1;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . exon 1100 1288 . - . ID=g3325.t1.exon1;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . CDS 1100 1286 . - 0 ID=cds.g3325.t1;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . exon 623 742 . - . ID=g3325.t1.exon2;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . CDS 623 742 . - 2 ID=cds.g3325.t1;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . exon 359 432 . - . ID=g3325.t1.exon3;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . CDS 359 432 . - 2 ID=cds.g3325.t1;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . exon 55 174 . - . ID=g3325.t1.exon4;Parent=g3325.t1 NODE_4708_length_1305_cov_34.6862 . CDS 55 174 . - 0 ID=cds.g3325.t1;Parent=g3325.t1;3_prime_partial=true #PROT g3325.t1 g3325 MREDSSDDSDRDDVSDGDNDEDDEDDDVITDMPAIKVRRDSLDIKLGNRPDRRNLVDRNIVTEASDEEKQAIHDKLEKKLQNHLATRPEKVDLIDRNILKGQNVNPNLFDSQESLKWASTVDILNNAMKRRPSIAELEERNILINFRETVDVGTTFTPGEYDRKVEK # ORIGINAL: g2787.t1 original gene structure, not modified by PASA NODE_4584_length_1430_cov_55.0915_potentialcontaminant AUGUSTUS gene 1 1353 . - . ID=g2787;Name=g2787.t1 NODE_4584_length_1430_cov_55.0915_potentialcontaminant AUGUSTUS mRNA 1 1353 . - . ID=g2787.t1;Parent=g2787;Name=g2787.t1 NODE_4584_length_1430_cov_55.0915_potentialcontaminant AUGUSTUS exon 1 1353 . - . ID=g2787.t1.exon1;Parent=g2787.t1 NODE_4584_length_1430_cov_55.0915_potentialcontaminant AUGUSTUS CDS 1 1353 . - 0 ID=cds.g2787.t1;Parent=g2787.t1 #PROT g2787.t1 g2787 MFLEFIIICVTALAVAAWWSVHSYNTTRPTDPPLVRSSVPFLGHIISFGTDPLGFLMKCKKDKGGLFTINMCGKRTTIVSDPRLHSYFFSPRNEILSPREVYAFMTPVFGEGVAYGASYARMREQLGFLSEELTVSKFQNFCPAIQSEVRKFIENNWKGESGEINLQEDMSAMIINTACQCLFGEDLRKRLDARRVSHLLAEMEASLVPAALFLPILLKLPTTTVGRCRKARGELQSVLASIVEARQKEGSDDSSTSDLLAGLMNAVYRDGTPMSLHEVCGMIVAAMFAGQHTSTITTTWTLLHLIQPGNKEHLAKVREETSEFSVNVTYDNVMNDMPFTDACARESIRRDPPLMMLMRMCMENVKIGDVVVPKGDIIACSPLLSHHDEDAFPNARQWNPDRKVVIEGANVAFGAGVHKCMGEKFGLLQVKTILATILTDFDLVPLHPTIP # PASA_UPDATE: g2007.t1, single gene model update, valid-1, status:[pasa:asmbl_6647,status:12], valid-1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . gene 1496 2550 . + . ID=g2007;Name=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . mRNA 1496 2550 . + . ID=g2007.t1;Parent=g2007;Name=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . five_prime_UTR 1496 1627 . + . ID=g2007.t1.utr5p1;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . exon 1496 1753 . + . ID=g2007.t1.exon1;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . CDS 1628 1753 . + 0 ID=cds.g2007.t1;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . exon 1900 1995 . + . ID=g2007.t1.exon2;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . CDS 1900 1995 . + 0 ID=cds.g2007.t1;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . exon 2191 2277 . + . ID=g2007.t1.exon3;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . CDS 2191 2277 . + 0 ID=cds.g2007.t1;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . exon 2458 2550 . + . ID=g2007.t1.exon4;Parent=g2007.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant . CDS 2458 2550 . + 0 ID=cds.g2007.t1;Parent=g2007.t1 #PROT g2007.t1 g2007 MLSSQATVNKDVEVANAPADGISCLKFSPVANHLVATSWDNQVRCWEINAATGASVPKAAITHDAPVLSASWHSDGSKVFTGGCDKLVKMWDLPTNQQMQVAVHDAPIRHVIWLPSANMLVTASWDKSIRVRW* # ORIGINAL: g2006.t1 original gene structure, not modified by PASA NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS gene 1 975 . - . ID=g2006;Name=g2006.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS mRNA 1 975 . - . ID=g2006.t1;Parent=g2006;Name=g2006.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS exon 802 975 . - . ID=g2006.t1.exon1;Parent=g2006.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS CDS 802 975 . - 0 ID=cds.g2006.t1;Parent=g2006.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS exon 1 681 . - . ID=g2006.t1.exon2;Parent=g2006.t1 NODE_3851_length_2628_cov_44.2099_potentialcontaminant AUGUSTUS CDS 1 681 . - 0 ID=cds.g2006.t1;Parent=g2006.t1 #PROT g2006.t1 g2006 MPNSLDNDLLDLLGDDDGPSTKKKAPAATTAHKPPMPKLERSGSELNFFPSSKPVARKAAGRHAKFADDDNLYANLAASAGGGGGGGGSIDDDIVPDEDATGKVTSSLSGIDDLETDLFSFRGKQRRGRKGSNDSANIHTPPPATPEKPPTAGSIASSSGGATAMAEVARSLRSASPAPMSPGLQRQRATMGSPSVRFADDVSDDLVPPKSGGSVGTGGGGYGDDIGSSGGYASSFGSSGRTRGSSQNLFDDTPAPRPSSSGGLEDSHGSGGFGYGGGSGSGGGG # PASA_UPDATE: g7832.t1, single gene model update, valid-1, status:[pasa:asmbl_5020,status:12], valid-1 NODE_2794_length_5104_cov_38.9897 . gene 282 4222 . - . ID=g7832;Name=g7832.t1 NODE_2794_length_5104_cov_38.9897 . mRNA 282 4222 . - . ID=g7832.t1;Parent=g7832;Name=g7832.t1 NODE_2794_length_5104_cov_38.9897 . five_prime_UTR 4120 4222 . - . ID=g7832.t1.utr5p1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 4029 4222 . - . ID=g7832.t1.exon1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 4029 4119 . - 0 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 3380 3858 . - . ID=g7832.t1.exon2;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 3380 3858 . - 2 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 2915 3205 . - . ID=g7832.t1.exon3;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 2915 3205 . - 0 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 2286 2651 . - . ID=g7832.t1.exon4;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 2286 2651 . - 0 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 1775 1870 . - . ID=g7832.t1.exon5;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 1775 1870 . - 0 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 1548 1580 . - . ID=g7832.t1.exon6;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 1548 1580 . - 0 ID=cds.g7832.t1;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . exon 282 1342 . - . ID=g7832.t1.exon7;Parent=g7832.t1 NODE_2794_length_5104_cov_38.9897 . CDS 282 1342 . - 0 ID=cds.g7832.t1;Parent=g7832.t1;3_prime_partial=true #PROT g7832.t1 g7832 MAFKGVVRFCCALLIAAIAVTTVCAAPAKKDAKAGTSVTYPGEDTREFYPVFSTMVEEHEDEHSRHARFARNAGESFHVQPFADRVSLRFSTPFGDHVYEHLEINRNMYAPDFVYSFYSSEHNISAQIKPDLVSYSGLTPNGAIALTYKGKDDFHATILDSDGHWVIDTVQGQSRSMNDKHRRDVGDSAMVFVRLSYDNAIQSACGVTEEIVEASRKVREAERKESADAGENNAPGRRGLKAIDVWTGCFTGQDLGVWTTTMSIATDTAFFIAMGSTNQLVVDAINQVIGATNLVYGAQFSVNLALKETMIMTSAGTPDWNKQLASTTTPRSCGYPAGNDINTALDSFTAWRSTQKKAGSLWHLLSNCFNLASSGGGCSGTVGLAWVGVICSGSNTGVSNSGCGCNGVVIKDKTWLTFAHETGHNFHAQHTFSNMKPPNSWGIMDYSDGKWQGEYQFYTPTNKAEMCQEIKDTLSTKDPTQTVSCWSPPTKTDGTQVGNKWVLDDTTKYTCVVTNFDSAGNALPTCGIGMKSVPYVCVNALNAPAADSTCALPKPAVSQVRCDTGIACYRWIDGTPSDYYCFPPCGTGQRTVPARCVDVGNNRQPDSVCTSQVGAAPTSKTLTCTGQPSCTSLYAWRLTSSFTQCRVPSEDNPNGIGFCGTAGSQWKPYACYDTTLNIPVDNYWCLSTVMPSVTLSKCDTGVTCYRWTTRTTTDCSVRCGKGVTGTFAFCEATLDPGKNVGESACTGLGLAKPAVAQTECDAGVCPANVLPKDVTYYQWKSVVKTTCDKRCDGGDIGDLVYCADT # PASA_UPDATE: g13521.t1, single gene model update, valid-1, status:[pasa:asmbl_4732,status:12], valid-1 NODE_2656_length_5534_cov_29.9194 . gene 257 2020 . - . ID=g13521;Name=g13521.t1 NODE_2656_length_5534_cov_29.9194 . mRNA 257 2020 . - . ID=g13521.t1;Parent=g13521;Name=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 2013 2020 . - . ID=g13521.t1.exon1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 2013 2020 . - 0 ID=cds.g13521.t1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 1644 1668 . - . ID=g13521.t1.exon2;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 1644 1668 . - 1 ID=cds.g13521.t1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 1219 1313 . - . ID=g13521.t1.exon3;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 1219 1313 . - 0 ID=cds.g13521.t1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 891 1060 . - . ID=g13521.t1.exon4;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 891 1060 . - 1 ID=cds.g13521.t1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 522 585 . - . ID=g13521.t1.exon5;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 522 585 . - 2 ID=cds.g13521.t1;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . exon 257 332 . - . ID=g13521.t1.exon6;Parent=g13521.t1 NODE_2656_length_5534_cov_29.9194 . CDS 257 332 . - 1 ID=cds.g13521.t1;Parent=g13521.t1;3_prime_partial=true #PROT g13521.t1 g13521 MGVDLKCLNLLVDDRWTVKVADFGLAHFSDAVNVDEIAGTIYWMAPELLSQKGEFSIKSDVYSFAMVMAEVISRALPYDAYLDDHPGTNADTLIERVTNGLRPHIPLDVPAEYRELMVDCWNADEGLRPSFVEINSRLLQMHASVS # ORIGINAL: g5368.t1 original gene structure, not modified by PASA NODE_2115_length_7661_cov_39.7307 AUGUSTUS gene 74 130 . - . ID=g5368;Name=g5368.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS mRNA 74 130 . - . ID=g5368.t1;Parent=g5368;Name=g5368.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 74 130 . - . ID=g5368.t1.exon1;Parent=g5368.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 74 130 . - 0 ID=cds.g5368.t1;Parent=g5368.t1 #PROT g5368.t1 g5368 MSAAGDSPSRGVAASKSGD # ORIGINAL: g5371.t1 original gene structure, not modified by PASA NODE_2115_length_7661_cov_39.7307 AUGUSTUS gene 5824 7569 . - . ID=g5371;Name=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS mRNA 5824 7569 . - . ID=g5371.t1;Parent=g5371;Name=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 7423 7569 . - . ID=g5371.t1.exon1;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 7423 7569 . - 0 ID=cds.g5371.t1;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 7149 7260 . - . ID=g5371.t1.exon2;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 7149 7260 . - 0 ID=cds.g5371.t1;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 6924 7045 . - . ID=g5371.t1.exon3;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 6924 7045 . - 2 ID=cds.g5371.t1;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 5824 6591 . - . ID=g5371.t1.exon4;Parent=g5371.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 5824 6591 . - 0 ID=cds.g5371.t1;Parent=g5371.t1 #PROT g5371.t1 g5371 MQLVNAAESQLVDAVDLFARTDAFLSMCDDGIRSIQSHVLENSPLAGAMVFKHNVHTRFESLPSIPDVDRNTLPRSSDNGKLVSVFGTIIRTGAVKTVEAAREFVCGKCKHVFLVKASGGKGSLPGTAEFNQYNTIPKPDRCPSPANPSCASTKFSEVAGQQATALSCRDYQEIKIQEQAQRLAIGTIPRSMPVVLEDDLVDTCKAGDDITVYGTVVRRWRPLVQDGRCDVELVIRAIFVRVHNERSHVQVTDEMRAEFEDFWRRHAGRPLVARNAIVGSFCPQVYGLQPVKLSVLLALIGGVARVDECGTRVRGESHILLVGDPGTAKSQFLRYAAKVVPRSVQTTGIGTTSAGLTVTAVRDGGEWQLEAGALVLADGGVC* # ORIGINAL: g5370.t1 original gene structure, not modified by PASA NODE_2115_length_7661_cov_39.7307 AUGUSTUS gene 4351 5769 . - . ID=g5370;Name=g5370.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS mRNA 4351 5769 . - . ID=g5370.t1;Parent=g5370;Name=g5370.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 4351 5769 . - . ID=g5370.t1.exon1;Parent=g5370.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 4351 5769 . - 0 ID=cds.g5370.t1;Parent=g5370.t1 #PROT g5370.t1 g5370 MEQQTLSVAKAGLVCKLNTRTTIIAATNPKGGYDPCADLAVNIAVASPLLSRFDMVLVLMDTRNPEWDAIVSRFILNRTRGAESSQQRPQASQSQQEEGGGDAGGAVGGPSAGESDEQWSLERLQAYVCYVKQKFQPRLSLEAEAVLGAYYRLQRRADTRNAARTTLRMLESLVRLAQAHARLMHRGTVMIADATIAVALTEASMQGSALLGVTGNPLHAPFPDNPDEEHRALQENILRRLRLDFPPEEPSDGRDATPPPAHPIVVPPRDTRETAAQCRTVPQHAVATPALIPSPHAPPITPPPRTDPSGGRPRQTVDVPVSRTPLRTLSLSQQSAPPSAVAMKAPVAAVGTVSGVMQTAPMSSRQLPAPTPAIYNTGQAMPLRSAQAAAGAPRTGNAGGLALLGFGSHGDGDDDDGGSVLDDAAMDDECFEWLPTPQLQPSLHSAKRKADDGSGDDTPDGMRRNGRPREAG* # ORIGINAL: g5369.t1 original gene structure, not modified by PASA NODE_2115_length_7661_cov_39.7307 AUGUSTUS gene 942 4073 . + . ID=g5369;Name=g5369.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS mRNA 942 4073 . + . ID=g5369.t1;Parent=g5369;Name=g5369.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS exon 942 4073 . + . ID=g5369.t1.exon1;Parent=g5369.t1 NODE_2115_length_7661_cov_39.7307 AUGUSTUS CDS 942 4073 . + 0 ID=cds.g5369.t1;Parent=g5369.t1 #PROT g5369.t1 g5369 MPLLALCGRARALPLRKYAARVRIAVASTTLQCARRGIVIPPGSRDRIRVGSSGSPMATVDVRPGDRLHGYTVQRVSPVPSLFLTAVLLSHDATGAQHLHVARADPNNVFSVAFRTAPTDSTGVAHILEHTTLCGSEAYPTRDPFFAMTDRSMATYMNAWTSLDYTQYPFATQNTQDFNNLMSVYLDATFFPLLKEADFRQEGWRLEHETVGDASSPITFKGVVFNEMKGALAESDARFGLSMQQLLLEGTPYAHVSGGEPLAIPDLTHAALKDFHRRNYHPSNAVFFTYGDIPLSNHLRLISTHALSRFKRRPVDFSPDALRVARWSQPRRHTIHCPPDPNAARPDRQAHAALAFLAGPRHSTFDGFCMQVVSWLLSSGNGSPFYKALIKPDIGEDFAPGTGYSAHAADTFFAAGLSGIRPEDAPRVEEIVRDALEVCASQPFDPRRVEAALHQMEIGVRHQSSSMGISLASSIVGPWLGGADPIELLDVDASVQRFREAVKDDMFLPGLIRTHFLNNPHTLSLLMVPDEGHQKRLADAEAALLASRVSALTDADRERTLADGVALAASQRAPRNAECLPRITLHDVDRVGQFTVVDHVGIAGVPVQVSVQPTNGIVYFRAIASVDSVPPELRAYLPLFAAVLTRLGADTMDDANLSNQMQLVTGGMSAGVHLALNPHDVAQFEQGIAFQSHCLGRNIGRMFDLWTALFNSPHLTNTAVMSTLAKAIASRYASSLIDESSHYAAQFASRGISSFHATSELIGGLTQVEFAKQLVSRDFAGVAERMAEIAKHVLTRPVLRCALNVDAQYRPPSEIALGQFLDRIDSRTPGASHLPLAPVPSLRSAFGLPTGGINGVALAVPTVPYMHVDSMALRVLASVMTSKRLHIDVREGGGAYGGGASHGSGAFLFHSYRDPRTTETLDAFRKAAQWAADESFTDSDVDDAKLTILKGLDAPVSPGARGMTIFVHGITHAMRQLQRERLFAVRRADVGAAVRKYIVSGLDGASAAIVGDDAAVAELAKAGWAVGLGKALDNLSLPPPLAA* # ORIGINAL: g5135.t1 original gene structure, not modified by PASA NODE_2435_length_6290_cov_34.5241 AUGUSTUS gene 146 2282 . + . ID=g5135;Name=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS mRNA 146 2282 . + . ID=g5135.t1;Parent=g5135;Name=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS exon 146 256 . + . ID=g5135.t1.exon1;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS CDS 146 256 . + 0 ID=cds.g5135.t1;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS exon 738 863 . + . ID=g5135.t1.exon2;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS CDS 738 863 . + 0 ID=cds.g5135.t1;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS exon 1081 1369 . + . ID=g5135.t1.exon3;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS CDS 1081 1369 . + 0 ID=cds.g5135.t1;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS exon 1656 1795 . + . ID=g5135.t1.exon4;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS CDS 1656 1795 . + 2 ID=cds.g5135.t1;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS exon 2115 2282 . + . ID=g5135.t1.exon5;Parent=g5135.t1 NODE_2435_length_6290_cov_34.5241 AUGUSTUS CDS 2115 2282 . + 0 ID=cds.g5135.t1;Parent=g5135.t1 #PROT g5135.t1 g5135 LRESQMHDLLEAKTIALAQADRVIAEHKAHRVQAEMEVSRLKRHCQDLELRSHDMKVQADEREARLAELAGEMRRLRHENDALIKRLKESDSAMGEFDALRDVHGHLERRFAELQGRYAEKCDEFASSTSACESLRKELTDASRRHSRAAEMQRVAEAQLAERTHELASCQKVLEDAQVRMEKQSDRCHRLDGELAAVTARANASEAALKKSDEERAELLEEASRMREKCRVHEAIARQCEETMQQQQAELQRHAHIVSLIHNISGNAVAAVNPSVC* # PASA_UPDATE: g6544.t1, single gene model update, valid-1, status:[pasa:asmbl_4394,status:12], valid-1 NODE_2474_length_6147_cov_38.1879 . gene 2288 5765 . - . ID=g6544;Name=g6544.t1 NODE_2474_length_6147_cov_38.1879 . mRNA 2288 5765 . - . ID=g6544.t1;Parent=g6544;Name=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 5682 5765 . - . ID=g6544.t1.exon1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 5682 5765 . - 0 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 5321 5442 . - . ID=g6544.t1.exon2;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 5321 5442 . - 0 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 4932 5055 . - . ID=g6544.t1.exon3;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 4932 5055 . - 1 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 4576 4717 . - . ID=g6544.t1.exon4;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 4576 4717 . - 0 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 4094 4190 . - . ID=g6544.t1.exon5;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 4094 4190 . - 2 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 3454 3552 . - . ID=g6544.t1.exon6;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 3454 3552 . - 1 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 3097 3206 . - . ID=g6544.t1.exon7;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 3097 3206 . - 1 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . exon 2288 2758 . - . ID=g6544.t1.exon8;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . CDS 2664 2758 . - 2 ID=cds.g6544.t1;Parent=g6544.t1 NODE_2474_length_6147_cov_38.1879 . three_prime_UTR 2288 2663 . - . ID=g6544.t1.utr3p1;Parent=g6544.t1 #PROT g6544.t1 g6544 MYCRPVTAVCLSEDGENVFSVSVDTLLKVHSVADKKQIRSISPSGSPLTSCALTSDGKTVLVGSYDNHVYQYSVEYGRVLEKKQLHDDAVSALCLRGGRLVTGSWDSGVRVWDYASLFGGRRGSIVDPSADFNEHDTAVTCLAITPDGQTAASGTRSGHVVVWDLKRSRSLWNADHGSAVVALALSPCARYIAIVFEESDQTVSVLQAPGIEHITLDTGASVRSLVWDGHIMLVGDVDGCVQLWDSDTRKRLASVTGVDGEPLTCLAISPSGRFVAAGTEGGSLCVWRVA* # PASA_UPDATE: g11277.t1, single gene model update, valid-1, status:[pasa:asmbl_5058,status:3], valid-1 NODE_2809_length_5076_cov_40.1648 . gene 486 2925 . - . ID=g11277;Name=g11277.t1 NODE_2809_length_5076_cov_40.1648 . mRNA 486 2925 . - . ID=g11277.t1;Parent=g11277;Name=g11277.t1 NODE_2809_length_5076_cov_40.1648 . five_prime_UTR 2663 2925 . - . ID=g11277.t1.utr5p1;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . exon 2211 2925 . - . ID=g11277.t1.exon1;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . CDS 2211 2662 . - 0 ID=cds.g11277.t1;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . exon 1209 1805 . - . ID=g11277.t1.exon2;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . CDS 1209 1805 . - 1 ID=cds.g11277.t1;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . exon 486 1024 . - . ID=g11277.t1.exon3;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . CDS 847 1024 . - 1 ID=cds.g11277.t1;Parent=g11277.t1 NODE_2809_length_5076_cov_40.1648 . three_prime_UTR 486 846 . - . ID=g11277.t1.utr3p1;Parent=g11277.t1 #PROT g11277.t1 g11277 MSDDSGACECSQTALWSADGFCVHPSHAHSWFLLRWRYRLREYILSFDETHTDGDDAAAAEESDEERLRGPVTADARRTGADDVDDDEDAQSVRVSDRAANGRTAGSNGGASSNRPTSVAGHVGDWIRARFAWIVLVAAIFAVSSAATVFKYLGGVGLFTKGAWRLLSTSFILLPCYVYQAAASPRRIRTRMFTAKSMLIQLGGGLVLSLHFATWLYSLEHTSLPHSLLLVCMHPVLIVGAMLLIGVPVGRWEVLGTAISFGGTVLLMRDVESDGEVTLVGDFMALVGAVFMILYLCVGRVLRSWMPIFVYAFPVTCWAGVWLAVMAIAVEGVSVFAAGKDGVFGFFAMDIHTLTPTTTPTTAPTHAPTRTATFRTSHISPSAPASWATPVSTMPYRLWVRWSSRLRC* # ORIGINAL: g11278.t1 original gene structure, not modified by PASA NODE_2809_length_5076_cov_40.1648 AUGUSTUS gene 3411 4864 . + . ID=g11278;Name=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS mRNA 3411 4864 . + . ID=g11278.t1;Parent=g11278;Name=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS exon 3411 3503 . + . ID=g11278.t1.exon1;Parent=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS CDS 3411 3503 . + 0 ID=cds.g11278.t1;Parent=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS exon 3749 3834 . + . ID=g11278.t1.exon2;Parent=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS CDS 3749 3834 . + 0 ID=cds.g11278.t1;Parent=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS exon 4066 4864 . + . ID=g11278.t1.exon3;Parent=g11278.t1 NODE_2809_length_5076_cov_40.1648 AUGUSTUS CDS 4066 4864 . + 1 ID=cds.g11278.t1;Parent=g11278.t1 #PROT g11278.t1 g11278 MSVTHSNGDGGDAQAALRSASRAAYLNMGLQLGLRILTFVMNAFVLRHVSRELLGTVNVRLTLLWSSILFLSRESLRKACLGDEFRNKQSVRNTVWLAVPIGACVSVALFLVWTALLVDPGVDGYTTAAAAFALAAVVELAAEPLYVHSQWNMHVGVKVCAEGVAMVVRCVVVAIAVTQFPGNGLTGFAIAQLAYAVGVVGAYYGHYALRIRGGQEPLLASVASLLPRRPPDAESFAESSLSAPLIPQAPEAPRSPRDSFRGPQVTYRRPMGADSWRSRAGEGGLFNVRALSLAAVFFRQGVLKQLLTEGERYIMTVFAVIGMGEQ # ORIGINAL: g9792.t1 original gene structure, not modified by PASA NODE_3619_length_3104_cov_32.6306 AUGUSTUS gene 113 2420 . - . ID=g9792;Name=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS mRNA 113 2420 . - . ID=g9792.t1;Parent=g9792;Name=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS exon 2368 2420 . - . ID=g9792.t1.exon1;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS CDS 2368 2420 . - 0 ID=cds.g9792.t1;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS exon 1324 2077 . - . ID=g9792.t1.exon2;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS CDS 1324 2077 . - 1 ID=cds.g9792.t1;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS exon 1002 1109 . - . ID=g9792.t1.exon3;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS CDS 1002 1109 . - 0 ID=cds.g9792.t1;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS exon 500 680 . - . ID=g9792.t1.exon4;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS CDS 500 680 . - 0 ID=cds.g9792.t1;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS exon 113 325 . - . ID=g9792.t1.exon5;Parent=g9792.t1 NODE_3619_length_3104_cov_32.6306 AUGUSTUS CDS 113 325 . - 2 ID=cds.g9792.t1;Parent=g9792.t1 #PROT g9792.t1 g9792 MTTKGSITVDNEDIKTGRLMLGLVVLPPTSGECNIVKNFTITVRKQISRSQYPGPILAVLAMFFAVYFLVALYMYLARHRLFERTMVRFRAVSTRARTPRQHTVRQTSNSSRNKELSPLLGDSDATPGRGSTFQDDEIAPYQRYLQQQQQQQSQQSGQIDGQRSSDLSAASIRGRGLSRRSPGMEDEEIKLAEASAAANGGSSGDGVSRNNRTDELVRTDDDALNGSVASLHGSSSEDEDTVVIGDADLADKQIARQKKNVHVADLTMKSFKYSKKKLSQYAANLLIIATFYFLPVVQLVIAYQKIFRKGEQDQCYYNFLCSRPLGDLSNFNNIYSNIGYILLGFLLVLIVKAKSLAYERNIAQSESGEEGSVAPPTPAASGQQPQGSQGSQQRRVEECGLPRHYGLFYAIGLAQMFEGVFSACYHICPTGNNFQF # ORIGINAL: g12563.t1 original gene structure, not modified by PASA NODE_474_length_23073_cov_44.9491 AUGUSTUS gene 83 2817 . - . ID=g12563;Name=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS mRNA 83 2817 . - . ID=g12563.t1;Parent=g12563;Name=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 2743 2817 . - . ID=g12563.t1.exon1;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 2743 2817 . - 0 ID=cds.g12563.t1;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 2503 2613 . - . ID=g12563.t1.exon2;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 2503 2613 . - 0 ID=cds.g12563.t1;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 2102 2245 . - . ID=g12563.t1.exon3;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 2102 2245 . - 0 ID=cds.g12563.t1;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 83 1612 . - . ID=g12563.t1.exon4;Parent=g12563.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 83 1612 . - 0 ID=cds.g12563.t1;Parent=g12563.t1 #PROT g12563.t1 g12563 MPHFSEEEFRGAKVQAISKPQSFFKVCHLAKGCELEEVSLRTASANTVFTPRLCAAILPMVNEGMPFQLSVSFRTRPIDRGKDAHATGNLWLVVVESKAHLANAMRDLREHGIPPVDAPYFALRIGECSADNTLRTTHFQATSGTIHKGYHTARPRSTTGNSSHRASIYSSGSNASFGSGVHADGPNDPLATLVSAHSESTGRGSSEGTGDNDAVELEVNEHGELEEVRFLLRRIVLSARMWREFERTNMVRMVHAFYILSDGMVEMERPASIASGAGVGTSRAGGSVAQLGEKELRKQSLLCKFKLGIGVVKHGVAPMTLIPGGLVDTVHPTQPNGHHPRPALLADAASNGSHVLDMNAPLYKRTMLKQLQSRNRAQRDPFGSLVEAQQRLLDRTTTADVGDVVPAPAPAPVAMSAAEVMRLWSMIVIGRTVHYIIAHDRIQLAYRLAVPPPPPSGVPVKPLAVVVLVPGPFVNSLLRQFILDGLVKMLPVHGFTIDMRGHGLSEGRRGDAPNAKCLLKDIRSMVEHVRANYHGIPVVLAAHGVGAPIVLNYAAWKRRAPVDAYFLMAPVIHAIVKQETLAFFGIAMNPKHLFAMITAKDMINAVSAGRYYKRNMVNWQ # PASA_UPDATE: g12566.t1, single gene model update, valid-1, status:[pasa:asmbl_7579,status:3], valid-1 NODE_474_length_23073_cov_44.9491 . gene 8624 11059 . + . ID=g12566;Name=g12566.t1 NODE_474_length_23073_cov_44.9491 . mRNA 8624 11059 . + . ID=g12566.t1;Parent=g12566;Name=g12566.t1 NODE_474_length_23073_cov_44.9491 . five_prime_UTR 8624 8805 . + . ID=g12566.t1.utr5p1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 8624 8898 . + . ID=g12566.t1.exon1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 8806 8898 . + 0 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 9043 9585 . + . ID=g12566.t1.exon2;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 9043 9585 . + 0 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 9731 9872 . + . ID=g12566.t1.exon3;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 9731 9872 . + 0 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 10073 10188 . + . ID=g12566.t1.exon4;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 10073 10188 . + 2 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 10525 10671 . + . ID=g12566.t1.exon5;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 10525 10671 . + 0 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . exon 10821 11059 . + . ID=g12566.t1.exon6;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . CDS 10821 10940 . + 0 ID=cds.g12566.t1;Parent=g12566.t1 NODE_474_length_23073_cov_44.9491 . three_prime_UTR 10941 11059 . + . ID=g12566.t1.utr3p1;Parent=g12566.t1 #PROT g12566.t1 g12566 MSSAVKIGKVTWPPQTTDSEAADDKAEAATEPAVTGNAGKDENNTAVAEAVASTDSTTENAASDSNANATSEDLSTTTTVAPTVEAAPKETPAVASPSIAKKATADAHKPAYGSPSSTRKPADAVTQDNKPFVSPLTARKAAAETSHVSAPAYGLPSTMRGKPADPKNDAAIEKPSNAKGIGGYHSVSIPLSDSARGALERFKANEINWVSLEINAAGTSIEPIEAKSIDSSDVASLVKKDAPRFYIYSFGQGEIGRKTVFIYCCPGKSPPKLRMVYSTAKQHVIDAVAAFGVSITKKIESADADEVTGKFISDEVSHTAAMPSGGSSSTPSWAKPPEKEEKMVKPKVNTIGGAQHPVYSLMLQGKDAGTSTTKKKVVIPPSHAYG* # ORIGINAL: g12567.t1 original gene structure, not modified by PASA NODE_474_length_23073_cov_44.9491 AUGUSTUS gene 11447 12553 . + . ID=g12567;Name=g12567.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS mRNA 11447 12553 . + . ID=g12567.t1;Parent=g12567;Name=g12567.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 11447 12553 . + . ID=g12567.t1.exon1;Parent=g12567.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 11447 12553 . + 0 ID=cds.g12567.t1;Parent=g12567.t1 #PROT g12567.t1 g12567 MSWMAGWLLRKYDAFGVWYHSHPPLNVVGDVGDARDSAAIATESSKEPQLQQCQPEQRDNVARPDALVVSRNLSKGMLRLKGAFMGDDGKSVDYQGMVASEEFCALKQVAKSLVSIDLSHLDATERRAFFINVYNALTLHGIALAGPSLTSVLNVMSFWRTTSYLIGGHVYDLDSIENGILRNNSPHPTTKRISFHAGDPRLAYCVPLDPRIHFALNCSSKSCPAIRVFSGDRLEAELDSATKAFIEGDVEVIEKVSTRSSRARSLLGVKASLQAASGSTDSLQDSDGATGNTGSPQRHKARVKLRLSPIFNWYGVDFGGNAESVLSFVGRYADDALREQIVRAVSEHAGHHAAAIEWGQFDWQLNNK* # ORIGINAL: g12564.t1 original gene structure, not modified by PASA NODE_474_length_23073_cov_44.9491 AUGUSTUS gene 3413 4384 . - . ID=g12564;Name=g12564.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS mRNA 3413 4384 . - . ID=g12564.t1;Parent=g12564;Name=g12564.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 3413 4384 . - . ID=g12564.t1.exon1;Parent=g12564.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 3413 4384 . - 0 ID=cds.g12564.t1;Parent=g12564.t1 #PROT g12564.t1 g12564 MSSHGMSSQPASITSLPLEVIVTKLATKLNQPSLTALSSVNRWFREALRCERVYSLKRTYAALFRDDAAFRETVCKSLPENRLSLPMMGLSLTDLSIVNRVHTLNLGYEKAVNNENVALLANIHNLTLMWCPNLTDASPLGRVHTLSLGGCDVDDVSALGGVHTLVLFCCQRVTDVSALGGVYSLNLFECHNITDVSALGTVHTLNLSGCDSIRDVSTLGTVHTLDLSNTLVEDVSALGHVHTLDLRGCANVTDVSSLGTVYMLNISDCDSITDVSALGGVHHLEASYCLKVPLESYEALERSRALVLKRRHAESQHHSSLHW* # PASA_UPDATE: g12565.t1, single gene model update, valid-1, status:[pasa:asmbl_7577,status:3], valid-1 NODE_474_length_23073_cov_44.9491 . gene 5241 7901 . - . ID=g12565;Name=g12565.t1 NODE_474_length_23073_cov_44.9491 . mRNA 5241 7901 . - . ID=g12565.t1;Parent=g12565;Name=g12565.t1 NODE_474_length_23073_cov_44.9491 . five_prime_UTR 7851 7901 . - . ID=g12565.t1.utr5p1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 7778 7901 . - . ID=g12565.t1.exon1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 7778 7850 . - 0 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 7341 7583 . - . ID=g12565.t1.exon2;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 7341 7583 . - 2 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 6947 7079 . - . ID=g12565.t1.exon3;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 6947 7079 . - 2 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 6569 6736 . - . ID=g12565.t1.exon4;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 6569 6736 . - 1 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 6069 6343 . - . ID=g12565.t1.exon5;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 6069 6343 . - 1 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 5791 5855 . - . ID=g12565.t1.exon6;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 5791 5855 . - 2 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . exon 5241 5563 . - . ID=g12565.t1.exon7;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . CDS 5528 5563 . - 0 ID=cds.g12565.t1;Parent=g12565.t1 NODE_474_length_23073_cov_44.9491 . three_prime_UTR 5241 5527 . - . ID=g12565.t1.utr3p1;Parent=g12565.t1 #PROT g12565.t1 g12565 MAPITFRTAVAVVLIAAASSVFAERRSIEYDPTKFGFPAKEGAKFTVYTDTDASGKPTVAGFRIPDFLNSPADLTVDMTKNVRADLVLPETPGLGYKILGVNWNFAGHRGGLTAEDRAIFNTLPAGQQQADFLTAHGAWVAPHFDFHSYTVDGAWLDQIKCSNGFPPCKMNDDDLKKFTTYPDARFMPTNYLPSIYLSTPRMGIHWDDVTDSVSKAKFNMTPGVLYGSYNGRVAFFETMIANPTFLNLQSTGDKLVQSLNRPDHFQRSGYYASQFSLQWDAMTSEYIYEIFGFDYFTVDPAFANDEWKETFGEWQKAFKAWKDDTACPTA* # ORIGINAL: g12568.t1 original gene structure, not modified by PASA NODE_474_length_23073_cov_44.9491 AUGUSTUS gene 12980 15343 . - . ID=g12568;Name=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS mRNA 12980 15343 . - . ID=g12568.t1;Parent=g12568;Name=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 13772 15343 . - . ID=g12568.t1.exon1;Parent=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 13772 15343 . - 0 ID=cds.g12568.t1;Parent=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 13445 13650 . - . ID=g12568.t1.exon2;Parent=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 13445 13650 . - 0 ID=cds.g12568.t1;Parent=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 12980 13319 . - . ID=g12568.t1.exon3;Parent=g12568.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 12980 13319 . - 1 ID=cds.g12568.t1;Parent=g12568.t1 #PROT g12568.t1 g12568 MSNTAASDGLRKVGLMMALIFMVAVGFTFFLFHETLFQNSVTLHVDEPMNVVYDAEEFEPHIPSTESDTDFIVDHLNYKGHIREYDADTWKSVDDDVERKLFLTSAKRGTPKGNVLETSDADVTVEYERKIAAAAEKRRNAAAARALAEAEAEYSPDANSTHPLGTRYSRLLESLVHLEWRYADTMYKRGSPSLILRGLDWVLERDASTYVFAFRNNRIRLTRTIPGTVEQTRRTVSGILCASFNDGDVECLPGNAYKTLKRFQRISRLHGLRSVLWDKTHFCKVLRTAQEGYERTFPGRSIVPFTFPCFVMPREFNQLEEYARADNSVPIGEQKWIIKPPAMGAGRGIYVVHGLSRLRYLRDHRPKNSTLLVQPYLNTPYLLDGYKFDLRTYVLVTSISPLRIYIYKEGLVRLAGRPYDATAAAGGDKTQFLTNVSINKKFKSISELVWTFARFKSYLSKHGEVPEVIFGRIYAAIVKTFMASEPAFTRHFDQMSKGYKCENCYQLMGVDVIFDSKLRPLVIEVNGSPDMSLSWNPDSAYYDNTKKNMMTNVLAINYGRTTAATTLYREMKSVGVVHASDEKCKKARPYAFDIHVTPAEQARDSSNGMRPGTEYWQCLDDDELSTFLVERTEEKKAGGFVRLYPSRFLGNRLDIVQLLRHVATRMPPKTKGTYYYHPLTMSMLNSRPQTSKGGQKDKSVRKPKR* # PASA_UPDATE: g12570.t1, single gene model update, valid-1, status:[pasa:asmbl_7578,status:3], valid-1 NODE_474_length_23073_cov_44.9491 . gene 20137 21699 . - . ID=g12570;Name=g12570.t1 NODE_474_length_23073_cov_44.9491 . mRNA 20137 21699 . - . ID=g12570.t1;Parent=g12570;Name=g12570.t1 NODE_474_length_23073_cov_44.9491 . five_prime_UTR 21605 21699 . - . ID=g12570.t1.utr5p1;Parent=g12570.t1 NODE_474_length_23073_cov_44.9491 . exon 21392 21699 . - . ID=g12570.t1.exon1;Parent=g12570.t1 NODE_474_length_23073_cov_44.9491 . CDS 21392 21604 . - 0 ID=cds.g12570.t1;Parent=g12570.t1 NODE_474_length_23073_cov_44.9491 . exon 20137 20863 . - . ID=g12570.t1.exon2;Parent=g12570.t1 NODE_474_length_23073_cov_44.9491 . CDS 20228 20863 . - 0 ID=cds.g12570.t1;Parent=g12570.t1 NODE_474_length_23073_cov_44.9491 . three_prime_UTR 20137 20227 . - . ID=g12570.t1.utr3p1;Parent=g12570.t1 #PROT g12570.t1 g12570 MHSNSKSTEHLGLAETAVGGAEIPPGQFVLMADAGSAKFKEGEYYYSLFGCLKECAITCCTCTAYPWMVAKAAGDLNEGGLDWCLFCVAFIFPGVSGLFLRDRTKKAFNLQESEFATFCKACCCTCCATVQDIRELKARGKYDPIWGKMGSNGVPEKTKYSTNICGCCGDPTTCLLTWCCGPIIMGKAAGDVDKTGYDCLLCCCSIVNFWMGSLALREKVKNKYKISEPFVKTLCCTLCFPLCAVTQDVREVKIQGDYSAGLVIDPSATAKKYAAGAGVTFQ* # PASA_UPDATE: g12571.t1, single gene model update, valid-1, status:[pasa:asmbl_7576,status:12], valid-1 NODE_474_length_23073_cov_44.9491 . gene 22323 23057 . - . ID=g12571;Name=g12571.t1 NODE_474_length_23073_cov_44.9491 . mRNA 22323 23057 . - . ID=g12571.t1;Parent=g12571;Name=g12571.t1 NODE_474_length_23073_cov_44.9491 . five_prime_UTR 23023 23057 . - . ID=g12571.t1.utr5p1;Parent=g12571.t1 NODE_474_length_23073_cov_44.9491 . exon 22323 23057 . - . ID=g12571.t1.exon1;Parent=g12571.t1 NODE_474_length_23073_cov_44.9491 . CDS 22672 23022 . - 0 ID=cds.g12571.t1;Parent=g12571.t1 NODE_474_length_23073_cov_44.9491 . three_prime_UTR 22323 22671 . - . ID=g12571.t1.utr3p1;Parent=g12571.t1 #PROT g12571.t1 g12571 MNGRGDATGPQFLGYGYGESTQFVDSSSLPAPADAGVIGEHGSGYSSAAGGASGDNTQDPDDTDELMGWARNSANGRAKAQSGGKGTEGATGADGGSFAKRSERARYVDTFNATSS* # ORIGINAL: g12569.t1 original gene structure, not modified by PASA NODE_474_length_23073_cov_44.9491 AUGUSTUS gene 16110 18278 . - . ID=g12569;Name=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS mRNA 16110 18278 . - . ID=g12569.t1;Parent=g12569;Name=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 16905 18278 . - . ID=g12569.t1.exon1;Parent=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 16905 18278 . - 0 ID=cds.g12569.t1;Parent=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 16552 16784 . - . ID=g12569.t1.exon2;Parent=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 16552 16784 . - 0 ID=cds.g12569.t1;Parent=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS exon 16110 16416 . - . ID=g12569.t1.exon3;Parent=g12569.t1 NODE_474_length_23073_cov_44.9491 AUGUSTUS CDS 16110 16416 . - 1 ID=cds.g12569.t1;Parent=g12569.t1 #PROT g12569.t1 g12569 MTETTPLSPVLETESVTRLRIFLIAMVIVSVGAAGLLVAQHEQRNSMSVEEAPIGLEVDRVKVNAYVRSIGKSGELIKAGAKTPKQAALEIRQLRQLEATSHLVLFETLLRMEWRMNEALFKRRRPTVVFRGIPWVMARDQLTYRASFDNASIRSVRLGLGRNQTSTGLSSISGIVCAAISDADLFCLKGSQYPRLGRFQRISRLHGLREILWKKNGFCRVLRDAIDGYEDTHPGYELEPFTFPCYVLPEEYSSLVKYSTSLAKTEPIAAQKWIVKPPDLGAGMGIYVVTGLERLKKLRDDGDTFIIQPYLNRPFLLNGYKFDLRTYVLVTSISPLRMYMYREGLVRLAGRPYNENAKGGGLRTQFLTNVSVNKKFKSISELVWTFKRFKAYLRKVGQDPTEVYNRIYEAVTKVFISAEPAFLRHFETMGRGYRCPQCYQLMGVDVIFDADMKPIVIEVNGSPDMSLSRKAESAYYDQTKKGMMSNVLEINFAKAPTVVADLYRELRALGVNHKTEKRCRAGVNKFHINYTSKLQKASSNGWIANFKAGANATLPEYWQCLDNEDLGILLVDRVQMTKANGFKRLYPSDVIGDNEDIGRLLRHIAAKLPEGTRGTYYYHPLSMSLMRIHTGSVRRQK* # ORIGINAL: g5504.t1 original gene structure, not modified by PASA NODE_3459_length_3416_cov_39.5702 AUGUSTUS gene 421 3293 . + . ID=g5504;Name=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS mRNA 421 3293 . + . ID=g5504.t1;Parent=g5504;Name=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 421 563 . + . ID=g5504.t1.exon1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 421 563 . + 0 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 647 1214 . + . ID=g5504.t1.exon2;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 647 1214 . + 1 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 1389 1469 . + . ID=g5504.t1.exon3;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 1389 1469 . + 0 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 1728 1889 . + . ID=g5504.t1.exon4;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 1728 1889 . + 0 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 2144 2294 . + . ID=g5504.t1.exon5;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 2144 2294 . + 0 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 2448 2533 . + . ID=g5504.t1.exon6;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 2448 2533 . + 2 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 2882 2991 . + . ID=g5504.t1.exon7;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 2882 2991 . + 0 ID=cds.g5504.t1;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS exon 3155 3293 . + . ID=g5504.t1.exon8;Parent=g5504.t1 NODE_3459_length_3416_cov_39.5702 AUGUSTUS CDS 3155 3293 . + 1 ID=cds.g5504.t1;Parent=g5504.t1 #PROT g5504.t1 g5504 MASLGRAGSVMRCVPAPRSNVSGAVLQQKRAYRRYISGSSNVSAAIPVRKDAPSVDTSGNQLSELHPRINSAKFVGMTGGQIFHEMMLDHGVKHVFGYPGGAILPVFDAIYESPHFNFVLPRHEQGAGHMAEGYARASGKPGVVLVTSGPGATNTVTPLQDALMDGTPMVVFSGQVPTTAMGSDAFQEADVVGITRHCTKWNVLVRDIRELPRRINEAFYIATSGRPGPVLVDLPKDVTAGTLTTAPDVTPRLPSEIRHRPKAQGPLGREDWERLAHMINSAKRPIIYAGQGVINSGASTLLREFAAKANIPVTTTLQGMGAFDELNPLSLHMLGMHGAAYANFAMQNADVIIALGARFDDRVTGNIKKFAAEANRAERENRGGIIHFEISPKQINKVVHATEAVIGDLGTNLKHLLPLVRSSARQEWFASIKEWKEKYPFRYTPAKAKGAIKPQRVLEEVCTTNVYMCVCAHSADPTD* # PASA_UPDATE: g3598.t1, single gene model update, valid-1, status:[pasa:asmbl_363,status:12], valid-1 NODE_1097_length_14022_cov_39.1584 . gene 10651 13941 . - . ID=g3598;Name=g3598.t1 NODE_1097_length_14022_cov_39.1584 . mRNA 10651 13941 . - . ID=g3598.t1;Parent=g3598;Name=g3598.t1 NODE_1097_length_14022_cov_39.1584 . five_prime_UTR 13941 13941 . - . ID=g3598.t1.utr5p1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 13512 13941 . - . ID=g3598.t1.exon1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 13512 13940 . - 0 ID=cds.g3598.t1;Parent=g3598.t1;5_prime_partial=true NODE_1097_length_14022_cov_39.1584 . exon 13356 13422 . - . ID=g3598.t1.exon2;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 13356 13422 . - 0 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 12985 13043 . - . ID=g3598.t1.exon3;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 12985 13043 . - 2 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 12430 12753 . - . ID=g3598.t1.exon4;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 12430 12753 . - 0 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 11950 12229 . - . ID=g3598.t1.exon5;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 11950 12229 . - 0 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 11542 11717 . - . ID=g3598.t1.exon6;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 11542 11717 . - 2 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 11105 11254 . - . ID=g3598.t1.exon7;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 11105 11254 . - 0 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . exon 10651 10920 . - . ID=g3598.t1.exon8;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . CDS 10852 10920 . - 0 ID=cds.g3598.t1;Parent=g3598.t1 NODE_1097_length_14022_cov_39.1584 . three_prime_UTR 10651 10851 . - . ID=g3598.t1.utr3p1;Parent=g3598.t1 #PROT g3598.t1 g3598 DSEEKHWVIARTEAEALEEAVSRFCVAKELIRLDQDPDVLDTWFSSALFPFSIFGWPEQTEELELFYPGALLETGHDILFFWVARMVFFGMELTGKVPFKEVFLHAIVRDAHGRKMSKSLGNVIDPVDVIRGIKLEDLHKQLEGGNLDPQEVIKAIEAQKRDYPDGIPECGTDALRFALCAYTAQGRDINLDVNRVVGYRHFCNKLWNATRFALQKLGEGYVPPAAFSLAADEAPIDRWILSRLSHAVAECDAGFNGYDFQKATTAIYNFWLYELCDVYIEAVKPVFGGADAKAAAASRSTLHTCLDFGIRILGPFMPFLTEELYHRLPKRADDVFVSICVTPYPSPADCARSDAAVEAEFAQAQDVIKAIRSLKMSYLTAKAKPHSFIRCFDGALREVLTKFVSVIGTLAGSDPISLVLDTAEVPAGCAMEVVTGKCEVNILVKGLVDVDKEIARLTDKVEKLNVTLDKQRKATQVPEYEKRVPEKVREQNAEKIKDIETEINAVERARQTYEEMR* # ORIGINAL: g3597.t1 original gene structure, not modified by PASA NODE_1097_length_14022_cov_39.1584 AUGUSTUS gene 101 10219 . + . ID=g3597;Name=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS mRNA 101 10219 . + . ID=g3597.t1;Parent=g3597;Name=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS exon 101 3840 . + . ID=g3597.t1.exon1;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS CDS 101 3840 . + 0 ID=cds.g3597.t1;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS exon 4150 4343 . + . ID=g3597.t1.exon2;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS CDS 4150 4343 . + 1 ID=cds.g3597.t1;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS exon 4619 4730 . + . ID=g3597.t1.exon3;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS CDS 4619 4730 . + 2 ID=cds.g3597.t1;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS exon 5273 7698 . + . ID=g3597.t1.exon4;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS CDS 5273 7698 . + 1 ID=cds.g3597.t1;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS exon 7956 10219 . + . ID=g3597.t1.exon5;Parent=g3597.t1 NODE_1097_length_14022_cov_39.1584 AUGUSTUS CDS 7956 10219 . + 2 ID=cds.g3597.t1;Parent=g3597.t1 #PROT g3597.t1 g3597 LNVIRLVAPDVCVLIMSVLGAILTRGDKGAEVHVPPFKFASGGSRRLRTRDYACLAALFPCAVLLPSGLSSPYMLMIVLGALRWAFRIGGVSAWPLMLGVAHPYTVLHMMVLYMYQWKFFQEAVEPDCDIAVSVGLVAYVDAAYDASTHPQRTPLALYGTSISWFHFAFAAWLLAFSLALSFRRTALRRRVLVQILRDRRASGVPAASSSANANAARLPRVGASSVAADLRTPLLSAAPTMTTAASRPTSLHHQQSRSGDDVQLSRRTASVQQPDAGSLPREKPSFERANSSSRPADGSAVGVASTTATTATPAGGSIPVVLSSDGIGRPSMGARVRAVLGIGRNFVARYGWHVAPLGMLVWSIIFHSWPSLVLLVWALAGWLFPRTYFLRSTPLIALYASVLLLAEFVYQMRVPYIVTYRQAGLMVDSTPCLAVGAKTIVFLVLSYISHHRFDAIEDEADGHIPDNHVHYGGVGITATVTHVDAPSQRAHAASSVVTPTSPPTTRTSLGVGGLARASDSLVTPLMADVHDRSGPGGDGYVSPVLTRKGIPPLRRSISEGQKSAFSTFSMTSGGTTSTSDNLDGHAHSVQAPIGQKSAALPPVVVVDSRWAKFRDIFKAGLTFLYSLVLQYSHVMCLLALYVCGLQQVALVNAVYMVACVVFWTFPNIARRFWTALILYTDVVVIALYVWRFPFSDHFHSSWPEVVGLVSEDADTTLAEILSWHLAILAFSLLQRHVYCIRDDQPVVVLSRAGSYSRLRTVSEGIESNDGLDGSDWRVRTESADDEELCDETDPLLDGGGGLDVRAGIRDIKLSELIQQWIDWYEDCTDVLKRYWILASYVALLTVAFVGHATVLRLAYLFVFFLCCLCHHSMSRPLRVVRPLWWLVGIASGIAVIVMYAFQFTQLEKQLLKITTKSVLLDLGLEHHRNFALFTYLAGPTAMLLVAMYQTSLWGQNYIASVARFRPLRASADHASWMLSVWHFVERFAILHARTLVIVVLFIAAITQVAALNTVSMLLLILITPSRTLSTGLAIVVLLWIEMLALAKYAYQFSFFTDQGISTHNNTASMDAGSMPSLAPALIPAVTPSVANSMLFHAVEGIAHAGLGGIVGNGTAMSNITTSSITDAIWIGFRKHSEHPAAYIQVYVFLVLFLVLQSLARGWDKAIQQLYRPHRPYNPDFPVPLFVGRSGDEDGKPGTAVHFANNVLTYIGVELCAVIAVIVSFVRLNAFAVVYLLLVGVWLAVPKRRLVRVWKVFVVIVTLLLIVQYASLVGLPPSSHYRYWWENWNLHWQTGMARWLYLPPGQSSLVLIADFFLLLVTSMQGMVFDFEKANPSPADAPVEDFTVFPRSFTSHVKFFFFRYFYFVVLAFVFVSGATCTDVLAFGYILSSLYLFRGETLVLSAKKRRRHWNALLAYNYFVLCVKCCYQLPAYIVYWPTVNSSVVTGLSIIGLRRGLTIDRSGLDADMSLAWTNRGILFDFICFVLIVAQRRLFQSPQLAPVVNDTKLDRMTSFMRARLVAASLRTAQQEQMMCENERRESTRRRIAALRQTNRSSRAMGYPSDGLFKGPQSLYPELSQETAENVLHDMEDNVPHGAQRGFAHEIAGATGGVVDGGVVDGDCTVALPQTGGDGLDAAGVPGEASGVVGVAGMADGEDECVPQIVECPESDPGEGSRVRWTGVQLTPPHVTHVTRPRAGTDSDRQCEQICDDALVSELISSTADGPHVTIGGSTDGASSSRNDGPVVIAADAPTRAHVMRLVRDGTDAFIAWLWSFSVEYRAIRYWADAGAGAGSVSASMGDLFPPTDPPTTPGARPPRTTVTPARDSGVSLLVGSQTHSLAQSLTAGRTPTGQGSLDDVKNGWPIHRLKEDALRTKQSLKSPHAMGNSGSMTSLSGLGNSSGDMLIDIYEGVPYGADAGQDSETRENARHPRDNSDDSDDEGVARHRTNSRAVTPSRRTSYGEETLAHAKGTVTSSSRNASGVMPAHARVIDTGGVRPWQMCKSLYYLVLSHTEDVCLALMVLNNMANCNLLSVIFPIVVFTLAPLQRPRPPAAFWVSMILYTEFVICIKYLFQFDFWTFNNVCNLDSACEIIGIEKSRNNFVFAIGWDLCVLLALFAHRGTMRRLGVWRFHSKLRAFEMGGEETVRVAVGALADEARETFADLQLRQTLPTAGITESPFGRRTSLSDLQIDLLGTPRVGSPAPHTQHTHVHIRSHSIGGGVDDGTASSSYDTLPLAHMETGAGAGAGGDGGATTTSVAAADAVYWASMRGRSASSLSSMSYSEGVRSASISQPHSRSASFQRNNNNNNSGGIGGSGVEIRDMGTLKPFFSRMLDTSSLPSRDYYTVMFAFDFVAFIVIMFGWTGFQAAGSRNVTYFITENKIPLTFVLVLLAQFCLIIVDRCIYLRHSLSAKLALQIVLALLIHVGVFFLLPTLVNGRAFGDNAVLVCWYLAKAGYLYVSAQQIKYGYPTQILNNFLTRKFNIMNKVLFLGYMAIPFVHELRVIIDWTCTDTTFTLPHWFKMEDIYSQLYSVKALRQFESDFPRKLGEKQKWYAKGGVGGLLMFLLLFVVFLPLILIALATQNSVSNPPVGMSCTISIAGFEPLFKMSTLTENIVGLTHAQYSRLGQSGVALSEYEVGDTSAARIAPQSTGTWDTSPPSRENLVAMLLSSAENINVRADFTFYRASPISSVAETIEGGYVAPLAYGNPIRDALASMLTGPVSDNDTVPAGVVIPGLYPSVFRLPETGSASPLLPGNWPQFEFVNVSVGLSSMVDANGARREWWTVNQTSPHLVLWGDYPARAEWLEVVMVSDRVSDPKWGFVDSYGLIGLYISIVLVIGRFLRMSVANMSHTIVYDDMPCVDALLLICMDIYLARETGELDVEETMFWELVTLYRSPEALIEWTKPSSKRE* # PASA_UPDATE: g11309.t1, single gene model update, valid-1, status:[pasa:asmbl_7170,status:12], valid-1 NODE_4277_length_1893_cov_30.2382 . gene 117 1869 . - . ID=g11309;Name=g11309.t1 NODE_4277_length_1893_cov_30.2382 . mRNA 117 1869 . - . ID=g11309.t1;Parent=g11309;Name=g11309.t1 NODE_4277_length_1893_cov_30.2382 . five_prime_UTR 1762 1869 . - . ID=g11309.t1.utr5p1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . exon 1697 1869 . - . ID=g11309.t1.exon1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . CDS 1697 1761 . - 0 ID=cds.g11309.t1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . exon 1076 1283 . - . ID=g11309.t1.exon2;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . CDS 1076 1283 . - 1 ID=cds.g11309.t1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . exon 592 762 . - . ID=g11309.t1.exon3;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . CDS 592 762 . - 0 ID=cds.g11309.t1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . exon 117 284 . - . ID=g11309.t1.exon4;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . CDS 276 284 . - 0 ID=cds.g11309.t1;Parent=g11309.t1 NODE_4277_length_1893_cov_30.2382 . three_prime_UTR 117 275 . - . ID=g11309.t1.utr3p1;Parent=g11309.t1 #PROT g11309.t1 g11309 MCLENFASQSVERHNKPEVEIRSSPEVLMNPLVISRNEKERVLIETSINSMRVSIAIKQADEIEKILCKKFMSFIMMRAESFVVLRRKPVAGYDISFLITNFHTEQMYKHKLVDFIVQFMEDIDKEISEMKLSVNARARICAEEFLKKFV* # PASA_UPDATE: g2198.t1, single gene model update, valid-1, status:[pasa:asmbl_5284,status:12],[pasa:asmbl_5286,status:12], valid-1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . gene 175 1855 . + . ID=g2198;Name=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . mRNA 175 1855 . + . ID=g2198.t1;Parent=g2198;Name=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . five_prime_UTR 175 176 . + . ID=g2198.t1.utr5p1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . exon 175 260 . + . ID=g2198.t1.exon1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . CDS 177 260 . + 0 ID=cds.g2198.t1;Parent=g2198.t1;5_prime_partial=true NODE_2947_length_4664_cov_38.873_potentialcontaminant . exon 429 584 . + . ID=g2198.t1.exon2;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . CDS 429 584 . + 0 ID=cds.g2198.t1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . exon 753 920 . + . ID=g2198.t1.exon3;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . CDS 753 920 . + 0 ID=cds.g2198.t1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . exon 1202 1243 . + . ID=g2198.t1.exon4;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . CDS 1202 1243 . + 0 ID=cds.g2198.t1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . exon 1459 1855 . + . ID=g2198.t1.exon5;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . CDS 1459 1590 . + 0 ID=cds.g2198.t1;Parent=g2198.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant . three_prime_UTR 1591 1855 . + . ID=g2198.t1.utr3p1;Parent=g2198.t1 #PROT g2198.t1 g2198 CAGSRIYVHESIYDEFVQKSADRALRRKVGDPFDKTVEQGPQVDADQFKKVLAYIDTGRKDGARLVAGGKAAASKGYFVQPTVFADVKDNMTISREEIFGPVSCISKFSSADEVVKRANDTRYGLAAAIFTKDLSKAHSIAHKIRAGSVWVNCYDVLDTAAPFGGFKMSGIGRELGEYGLQQYTEVKVVTVKI* # ORIGINAL: g2199.t1 original gene structure, not modified by PASA NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS gene 3238 4476 . + . ID=g2199;Name=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS mRNA 3238 4476 . + . ID=g2199.t1;Parent=g2199;Name=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS exon 3238 3243 . + . ID=g2199.t1.exon1;Parent=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS CDS 3238 3243 . + 0 ID=cds.g2199.t1;Parent=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS exon 3586 3788 . + . ID=g2199.t1.exon2;Parent=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS CDS 3586 3788 . + 0 ID=cds.g2199.t1;Parent=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS exon 4158 4476 . + . ID=g2199.t1.exon3;Parent=g2199.t1 NODE_2947_length_4664_cov_38.873_potentialcontaminant AUGUSTUS CDS 4158 4476 . + 1 ID=cds.g2199.t1;Parent=g2199.t1 #PROT g2199.t1 g2199 MQTKIVYFGRPETPTFFNKVAEFEALNPGYKIEIFSNTTNDATQQSETMKQLLGKKSDVLDVILMDVIWVGDFADHLEDLNPYNVSSVTEGMFQSMVRNDIVDGRLVALPWFSDVGLLFYRKDLLRKYGFHSPPRTWVELRDMSMTIMDGEGNPNLWGFIGHMAGGGHLTAIVFL* # PASA_UPDATE: g3061.t1, single gene model update, valid-1, status:[pasa:asmbl_7456,status:12], valid-1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . gene 112 1362 . - . ID=g3061;Name=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . mRNA 112 1362 . - . ID=g3061.t1;Parent=g3061;Name=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . exon 1258 1362 . - . ID=g3061.t1.exon1;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . CDS 1258 1362 . - 0 ID=cds.g3061.t1;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . exon 941 1090 . - . ID=g3061.t1.exon2;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . CDS 941 1090 . - 0 ID=cds.g3061.t1;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . exon 501 722 . - . ID=g3061.t1.exon3;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . CDS 501 722 . - 0 ID=cds.g3061.t1;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . exon 112 329 . - . ID=g3061.t1.exon4;Parent=g3061.t1 NODE_4598_length_1417_cov_27.8547_potentialcontaminant . CDS 112 329 . - 0 ID=cds.g3061.t1;Parent=g3061.t1;3_prime_partial=true #PROT g3061.t1 g3061 MQFAVFVNSGSSANLLALAAIANPVRSRYLKAGDEVLVPAVCWSTTVWPIIQMNLKPVFVDVDPVTMNVCLDDLQRKITPNTKAMVAVHVLGNATNMAAFMKIIHDNHIILVEDTCESLGVLANGKFVGTHGDFGTYSFFFAHHMTTGEGGMVVCQTQEDVDLLRCLRAHGWTRELSNKTELEAKFSDVDPRFLFVNVGYNVRPMECQAVMGLVQLTRIDGLNGARVANHA # PASA_UPDATE: g6439.t1, single gene model update, valid-1, status:[pasa:asmbl_6377,status:12],[pasa:asmbl_6378,status:12], valid-1 NODE_3661_length_2998_cov_34.3685 . gene 1 1878 . - . ID=g6439;Name=g6439.t1 NODE_3661_length_2998_cov_34.3685 . mRNA 1 1878 . - . ID=g6439.t1;Parent=g6439;Name=g6439.t1 NODE_3661_length_2998_cov_34.3685 . five_prime_UTR 1713 1878 . - . ID=g6439.t1.utr5p1;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . exon 1153 1878 . - . ID=g6439.t1.exon1;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . CDS 1153 1712 . - 0 ID=cds.g6439.t1;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . exon 781 998 . - . ID=g6439.t1.exon2;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . CDS 781 998 . - 1 ID=cds.g6439.t1;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . exon 310 426 . - . ID=g6439.t1.exon3;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . CDS 310 426 . - 2 ID=cds.g6439.t1;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . exon 1 114 . - . ID=g6439.t1.exon4;Parent=g6439.t1 NODE_3661_length_2998_cov_34.3685 . CDS 1 114 . - 2 ID=cds.g6439.t1;Parent=g6439.t1;3_prime_partial=true #PROT g6439.t1 g6439 MPPIXXXXLAPRVFVTAPSERLRCVLCGDVFSDPVIAQCGHSFCRGCVVVAAVAGAPQPGSATARGQGTLGLLREPPCCPTDGTALSPRGPFIPNIIVAEQVAELLVHCRHGCIQRDDGSFVVCDAEDEGCPAHVRLGARDDHEAACEYAPVGCPYAPACGAVVRKKNLHSHVMSCAHAACPHKQRGCTYLGHAAAVEAHAAQCPFAPIDVQLVNSGDRLGTIAAVLGQREEEIAFLRSVLVRVSERVDRNEREHVQRMSSMEDRLAKMVEIVEDFGGQIALLKSELSHVHGKLGAGDADARDVMPGTYAHKCKGTFVGHLGPVWALAVDGDYLYS # ORIGINAL: g4967.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 9789 10833 . - . ID=g4967;Name=g4967.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 9789 10833 . - . ID=g4967.t1;Parent=g4967;Name=g4967.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 10815 10833 . - . ID=g4967.t1.exon1;Parent=g4967.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 10815 10833 . - 0 ID=cds.g4967.t1;Parent=g4967.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 9789 10090 . - . ID=g4967.t1.exon2;Parent=g4967.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 9789 10090 . - 2 ID=cds.g4967.t1;Parent=g4967.t1 #PROT g4967.t1 g4967 MLILQVRVLQQFPRIISGFPSKWEYANSYLFQTFVDPRTPFGAELTKKMQNAEQACQIATKMAVALCLEKYAAENPSANVHTFYPQSFVFRLDDGSFSRTEQQFID* # ORIGINAL: g4965.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 4583 7455 . + . ID=g4965;Name=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 4583 7455 . + . ID=g4965.t1;Parent=g4965;Name=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 4583 4648 . + . ID=g4965.t1.exon1;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 4583 4648 . + 0 ID=cds.g4965.t1;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 4829 5030 . + . ID=g4965.t1.exon2;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 4829 5030 . + 0 ID=cds.g4965.t1;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 5520 5605 . + . ID=g4965.t1.exon3;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 5520 5605 . + 2 ID=cds.g4965.t1;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 5859 5945 . + . ID=g4965.t1.exon4;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 5859 5945 . + 0 ID=cds.g4965.t1;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 6208 7455 . + . ID=g4965.t1.exon5;Parent=g4965.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 6208 7455 . + 0 ID=cds.g4965.t1;Parent=g4965.t1 #PROT g4965.t1 g4965 MNSPQPNTPRRFPGPAGALPPPSEVDKHGKRPSDESFAANGGASIVHGNAGVRFGKSPEVIARGMLEAAVDFEGGPWATLGRTHPAYAKRSILGSIHAKAIVEYDGILTPGCAILLQAVSVLMPSPRNIYLNITSDNIVQVFGVDGKVSDQKPLRVVPMPQRPPAPAQFVPVATDRGAQSREYASAGKPNAVLRRTNESSDASNVTSGANGAGGGLGVHGQLQGRTLAAAPQRVPTAEVRSQQVPMRQPLPTQQAHNQHTQQQLQQQQSPHYAQQQQQQPQSARMQAVGATSAPPPAGTVHAQSPANPQCDLQPFSPLNRTLPSLSPGSPIPPARVPVSGMQPQSPLDARPKPTNIYKTASTQQQQPQHQQQQQQQQPATHIAGAIVSPTIGNLAGPTLRFTTAVSASIAPTHCDTKGVLKAAPALSNNPYRTQPPAQRAPLATIAPPSNVRNAAAVTGLSGQSAVVVEAKAVLTAPLTTVKTVGRTLNPWSAPAAGAVSVNPPPPTVSSLVSSVKAPAPCNTAEDDFDEEGDQLFEGLDASIFDAFGDGDGAPDAKRQRLL* # PASA_UPDATE: g4968.t1, single gene model update, valid-1, status:[pasa:asmbl_2216,status:12], valid-1 NODE_163_length_34035_cov_60.397 . gene 11829 19658 . - . ID=g4968;Name=g4968.t1 NODE_163_length_34035_cov_60.397 . mRNA 11829 19658 . - . ID=g4968.t1;Parent=g4968;Name=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 19601 19658 . - . ID=g4968.t1.exon1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 19601 19658 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 18700 19382 . - . ID=g4968.t1.exon2;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 18700 19382 . - 2 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 18252 18551 . - . ID=g4968.t1.exon3;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 18252 18551 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 17754 17985 . - . ID=g4968.t1.exon4;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 17754 17985 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 16091 17594 . - . ID=g4968.t1.exon5;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 16091 17594 . - 2 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 14831 15863 . - . ID=g4968.t1.exon6;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 14831 15863 . - 1 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 13702 14630 . - . ID=g4968.t1.exon7;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 13702 14630 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 13412 13535 . - . ID=g4968.t1.exon8;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 13412 13535 . - 1 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 12909 13298 . - . ID=g4968.t1.exon9;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 12909 13298 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 12413 12775 . - . ID=g4968.t1.exon10;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 12413 12775 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 12134 12259 . - . ID=g4968.t1.exon11;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 12134 12259 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . exon 11829 12032 . - . ID=g4968.t1.exon12;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . CDS 11988 12032 . - 0 ID=cds.g4968.t1;Parent=g4968.t1 NODE_163_length_34035_cov_60.397 . three_prime_UTR 11829 11987 . - . ID=g4968.t1.utr3p1;Parent=g4968.t1 #PROT g4968.t1 g4968 MTELLCKWLNEEVKLSKSVESTSFQREFSNGYLFGELLQRFHLQDDFDAFVRSNTSDAKLNNFRRLEKTLSLLGVPFTARTAQEIMNENPREAANLTYQLYLALKRKNAASGQQTSTSLQAAKGAVRNNFDELDRARHESLLRHQVPRQTDIDLQRLSDPFVREAKRKEFMSQSQKLQEEAELQRLRKDRHEEMITKNKTKKAEFDMWAGGFEHLAKTHGASHPDSWQTAHRRMEEQKLQEAKTRKEYSRKTHSLDVAQGIETFERTLRKFVMNSENNEEGAAGGTGAAPANAQAAQVAAHARNVQLPRLGASPRRAVSPLGSTNAESEEYIARIKMRKTEEALARREREKRRRKVMVDQQRAQEDLEASRHESVLLARLMRQSMHERKIAAQLMQTRREKDVIRENRLFRERQYTERRQRDYEEAMRREAELARQVKQEYENHAKAERERYEMMEEARLHARYNKHYNFCQGVLVDIVDLASKVAEYTEISGNKLPPKLMREWKTLFLSSKPLYNESVEKREGSGSRPQSGVVTSSAGVQLAVAGQPPQTAAVDRFFVPIGNGVEETAPTEEDEEVQCLLDSADFEDYLEARGDWTTDADTTAIVPKAGVILGHVVHRLLTTTYPVEPPAPPPEFPAFPLRAAFIGKSFSGKTLSAVAIATQYRAAVLDINRLVDEAVQAYKAREPPKRKASGKAGEEDTAPMDMSVRADLGRQAQELLLEGRDVDDIILVKLMAEAIRSIDVDSEQAGGWILDGFPATARQAQLLEKELTGYEGPQQNKPEANDGGDKKGGAGAKNARGKGQQRDKKKKSVIVVDPDSERQTEQRPPRSGIDLVVMFSLPDNVALKRALGRRQDPLSGATYHLENDPPPSQADAILRGDTGVHGRLTPVRDASNEEAQLQQRLTAFQDEGKLLEDWYAMFKNMRPVDASLSRDGMLERIRGVFDEFLRAKRAEADGVVSEGSPATTSAPASAPSAGTPVAPVAPAAPAAAPIPAAPTAPLIPLATSAAAQMGSLTSVQNPSVQMIPEDRPPDETTAVSGAPAVVPLGKDAAGGRRSGNASPVATPTSAGRARGKGTPKDSAGAAQNATLTVMAPTALAVSESSLISAGSGMDAAGASAGTPEADGFADLPIDQELATVLTSQWELIENNYVDTTRHGFRMLRQERERILRYFFNTKQNFLSFLRRPDRKQDLVARWQRAYNALDEDIRDDAETKAELHRRVDDLREALWDICDARKDEAEKERHSIMEERWLEDHIGILTNLYIRLMQVEVDRFQDSSQLLDDYYCAMTENRMIEEPIGGMLIPMIDLPPTEGPPEAGAEGASVSLSTTQTQAHGNNAVGASRSDGGQGGLGSADPSKRRKLPLVKRMTYQPQPVKPSKKGEGGGNANNAAAAAAAAAAAAAAAAAAGSSQGLSDADRQLVLDAFAAAMQSVTKMRIRHEQEFLQENAPATATGSAAPSAPAQPTRHGKESVMDVRQGIASSSMALNTAGAAAAAAAVAPVVIEGEAEGDGANAADDVERLRLIEKALSERDRAVKHETKRVELRLELIRTRTLAILTELKSIAEETFKFMDDWLGERYRREMDSIDALCDVMREAIESEQKIVNELILEGAELVVDEEVLTFEPAPPPRAPTPIEDPHPDTFTVSQLKSLAMQFSALSPSGFVSTTDFVLLMQSLAALSGQADSLPDDWTAVTTGLLQAVCGLLSSTDCVDWRVFVVAASGVSHIPTIALAERYRCAFEEKDEAKSGKVDRATYDSIVLWFEQDEEAADGQYDRPANLKDLFYSIFKDGDGNIPYRDFLLYFVSGRDSTEGLRKAFAIMSSEIAPSDDAEFVHTVSAEELFRVLHHGNSDVHENHRLKSIADASDPLSKDRIFAVFAELGVPTNGRVSIDKLNKSADATQMMDACVSFRVTDFRAAVKLRRESLL* # ORIGINAL: g4970.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 22676 24331 . + . ID=g4970;Name=g4970.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 22676 24331 . + . ID=g4970.t1;Parent=g4970;Name=g4970.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 22676 24331 . + . ID=g4970.t1.exon1;Parent=g4970.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 22676 24331 . + 0 ID=cds.g4970.t1;Parent=g4970.t1 #PROT g4970.t1 g4970 MRLSTKGSDSGGGAGIQADLLAIHALGGHPCTVITALTAQNSVGVARIECVSDDIIRATIEALWTDLPPVAIKLGMLGSVAVMRIVAEFLGGIARDIPVVVDPVMIATNGANLMPASSNPTFDVDAPEQTPLSFFMSAILPLATLVTPNLPECATLCRVPLDSIANVDATAIERCAQVILSFGAGAVLVKGGHATGHYSSDYFLNASGTATWLSLPRLATTDSHGTGCTLSAAIATCLASGAAGSNPNVGTGVASNISLVDAVVISKAYVWEGLRRAVRLGKGPGPVAHTQWPRDPASIPFASAHPPVAPAEESPEGRAAAGHVTAGQWGDVPVAAFLTCGADPLGFYPIVGTAEMVERMAKCGVTTVQIRVKKSEKRNDAAVAQEVHLAIEVSKRYPHLRLFVNDHWRIAVECGAYGVHVGQEDLEVTDVDAIRAAGLRLGVSTHSYIEFARTKALRPSYVSLGPVYPTSSKEVPFAAQGPETVAHWRELIPSGTPLVAIGGISLNNVRCVLDAGAEGVAVISAISQSVDPEATALEWMRLCAEKTTTLK* # ORIGINAL: g4966.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 8713 9321 . - . ID=g4966;Name=g4966.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 8713 9321 . - . ID=g4966.t1;Parent=g4966;Name=g4966.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 8713 9321 . - . ID=g4966.t1.exon1;Parent=g4966.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 8713 9321 . - 0 ID=cds.g4966.t1;Parent=g4966.t1 #PROT g4966.t1 g4966 MPHDDSTKGFGGKGIRVFDSAPALLSAVKQNARSGALVAQKLIDDVMNFRGRRFDLRLYVLVTSLSPLKLYINFPGTVVRLAGSTATAKKESPTRHSQDDDVDAEDVAEIQGADTESEENGDDPDSQSEPEGELDRKKFLTNVSVHHDATALATLDSLLDYFRSLGFINVWNERTVPAIKRIAKIIFGLWNTCEHRDYSFKL* # PASA_UPDATE: g4972.t1, single gene model update, valid-1, status:[pasa:asmbl_2218,status:12], valid-1 NODE_163_length_34035_cov_60.397 . gene 25918 30066 . - . ID=g4972;Name=g4972.t1 NODE_163_length_34035_cov_60.397 . mRNA 25918 30066 . - . ID=g4972.t1;Parent=g4972;Name=g4972.t1 NODE_163_length_34035_cov_60.397 . five_prime_UTR 29956 30066 . - . ID=g4972.t1.utr5p1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 29854 30066 . - . ID=g4972.t1.exon1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 29854 29955 . - 0 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 29537 29615 . - . ID=g4972.t1.exon2;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 29537 29615 . - 0 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 29314 29390 . - . ID=g4972.t1.exon3;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 29314 29390 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 28954 29206 . - . ID=g4972.t1.exon4;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 28954 29206 . - 0 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 27926 28834 . - . ID=g4972.t1.exon5;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 27926 28834 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 27581 27724 . - . ID=g4972.t1.exon6;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 27581 27724 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 27310 27437 . - . ID=g4972.t1.exon7;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 27310 27437 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 26926 27001 . - . ID=g4972.t1.exon8;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 26926 27001 . - 0 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 26450 26622 . - . ID=g4972.t1.exon9;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 26450 26622 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 26184 26274 . - . ID=g4972.t1.exon10;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 26184 26274 . - 0 ID=cds.g4972.t1;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . exon 25918 25985 . - . ID=g4972.t1.exon11;Parent=g4972.t1 NODE_163_length_34035_cov_60.397 . CDS 25918 25985 . - 2 ID=cds.g4972.t1;Parent=g4972.t1 #PROT g4972.t1 g4972 MDMRVRKGIQPAFLQQVGIVGRKTGLRAKENVRKDEYDMDDVDDFFTSSGSEFSEEDDENVMPVALQSQPASAKSIRGPLTDNNQEARSTAKRQSLAPPKSHSKKDAGDDASAARVRSSTKKASALKSALKSASRKSVAPTATSFVVEPKEVHKRLSFSDDEDIVNGGSGDFDDIIMDNNNAQTDDSDDAEEVAKLPMPQTASKASARKKGAAVASVAASPAPRVAPEAPHSERLTRSALKKSAAVAAVTEMSSPFVSKSIAVASPRSVRKSVPGVGVQTGVEEEAASFTPRRSARKSVVTVAVSASKDRDVRASPAVSVVSRRSAAANESMSSASVAPTDSSRSLVDTTADGDDDEDMPRGNRSRKSKSTRELKQIAIEKEVTRSDANADAPSSPAPVANYDGGDYGDLDGDVNSMDHDAREDGDVDMPARDDAAASVSVSAEAEAEAVAAPVQKKRGGKRKREDPALREIAVPAGQPSLRFADDEELDANGNIRRSKRTKVAPLEFWKNERVVYDRRKSGAIIKEVIKREGVEDVPKRTRQTGPKKPRQRPAEADDSDDTPIPAGFSVDENPMAIVMNAEGTDEIELAIAKSDPMLKYKAVTGGDGNDGSLLIGRAFNADVFRSGSLVMRPKAIKPNQSSAGYTIVFFVSTGRVQVTVHKTSFIIKAGAHFFVPPGNQYSISNVYTKESKLAFIQLK* # ORIGINAL: g4969.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 20362 22032 . - . ID=g4969;Name=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 20362 22032 . - . ID=g4969.t1;Parent=g4969;Name=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 21999 22032 . - . ID=g4969.t1.exon1;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 21999 22032 . - 0 ID=cds.g4969.t1;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 21508 21908 . - . ID=g4969.t1.exon2;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 21508 21908 . - 2 ID=cds.g4969.t1;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 21246 21419 . - . ID=g4969.t1.exon3;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 21246 21419 . - 0 ID=cds.g4969.t1;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 20767 20943 . - . ID=g4969.t1.exon4;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 20767 20943 . - 0 ID=cds.g4969.t1;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 20362 20463 . - . ID=g4969.t1.exon5;Parent=g4969.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 20362 20463 . - 0 ID=cds.g4969.t1;Parent=g4969.t1 #PROT g4969.t1 g4969 MSDPELDDLLDDALDDFDKAKQAAAAASSAPRAATASASGAPLPSFPPNAAGDAFSEDAFADMFSKELEKMMEGFSLDPSLAQSLSQVAQQFVADSGAPSAASSGSTAGAKPSGGAAGSSSSASGVKTSVAQTLEELEKNARSLEEGGDVSLFGDDALVNSLVAEFEKALGGGEGGFPGMDQMLEGLISKEMLYPPFKDLTDKFPAWLAENEATVDPAQASKYHSQYVIATRIVAHFDAEAESDPREVKSQRIQDVMELLQELPGMQFDDAGNPRLPQMPDGLGPAEGADPCKMM* # PASA_UPDATE: g4974.t1, single gene model update, valid-1, status:[pasa:asmbl_2219,status:12], valid-1 NODE_163_length_34035_cov_60.397 . gene 32978 33795 . - . ID=g4974;Name=g4974.t1 NODE_163_length_34035_cov_60.397 . mRNA 32978 33795 . - . ID=g4974.t1;Parent=g4974;Name=g4974.t1 NODE_163_length_34035_cov_60.397 . exon 33715 33795 . - . ID=g4974.t1.exon1;Parent=g4974.t1 NODE_163_length_34035_cov_60.397 . CDS 33715 33795 . - 0 ID=cds.g4974.t1;Parent=g4974.t1;5_prime_partial=true NODE_163_length_34035_cov_60.397 . exon 33407 33553 . - . ID=g4974.t1.exon2;Parent=g4974.t1 NODE_163_length_34035_cov_60.397 . CDS 33407 33553 . - 0 ID=cds.g4974.t1;Parent=g4974.t1 NODE_163_length_34035_cov_60.397 . exon 32978 33139 . - . ID=g4974.t1.exon3;Parent=g4974.t1 NODE_163_length_34035_cov_60.397 . CDS 33080 33139 . - 0 ID=cds.g4974.t1;Parent=g4974.t1 NODE_163_length_34035_cov_60.397 . three_prime_UTR 32978 33079 . - . ID=g4974.t1.utr3p1;Parent=g4974.t1 #PROT g4974.t1 g4974 DTKGVEIKEAILAINKHYTAFLDPRTKRPIEQFDYAALANWREGKDTRLTSDTPCLVLKISDSVGKSKAVRFGCVEIAEVSSVLEKYVDAMADDY* # ORIGINAL: g4964.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 108 3540 . - . ID=g4964;Name=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 108 3540 . - . ID=g4964.t1;Parent=g4964;Name=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 2998 3540 . - . ID=g4964.t1.exon1;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 2998 3540 . - 0 ID=cds.g4964.t1;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 1648 2812 . - . ID=g4964.t1.exon2;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 1648 2812 . - 0 ID=cds.g4964.t1;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 1043 1443 . - . ID=g4964.t1.exon3;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 1043 1443 . - 2 ID=cds.g4964.t1;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 536 919 . - . ID=g4964.t1.exon4;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 536 919 . - 0 ID=cds.g4964.t1;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 108 302 . - . ID=g4964.t1.exon5;Parent=g4964.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 108 302 . - 0 ID=cds.g4964.t1;Parent=g4964.t1 #PROT g4964.t1 g4964 MAAPFTMDPGGVPVFRPTMEEFHDFSGYISRMEAAGAHEIGLAKVIPPDGWYPNRDYSAVGDLKISSPIQQIVTGRQGVYTQMNMVKRAMTVRDFEKLANSDRHKTPKHKDDDDLERIFWKNVTFIEPIYGADLPGSVFDPTVEDWNVDKLETILNTLSENAGGVRILGVNTAYLYFGMWKATFSWHVEDMDLYSINYIHYGEPKTWYVIPPSHGPRLERLAQGFFSADFRECPQFLRHKMSLISPNVLRQYSIPFSKITHRAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIDYGCRARLCHCSKDSVKIDMRIFLRKYRADSYVSSESSASESDSDSASDSDGEGSSGEEASDGVAVTAATGKRKRKSGADGTETTTKGKKAGAKSKAEKKDKKETKTKKAKKERKGEDAPKAKRQRTAETKESARERRARAAAATLAARHAAEFARECETNISLSREPLKGTPMCCVCRGEGVLQMGPDSTDDIAFSDRIAIARVAKTAGMTGIGGVRAACGPDVVVDVVGMGADGVDEDPLSEAEWNQEGKWRDEIGSRLVRCDSCHVTVHRDCYGVVHSSFPWRCVRCASLGEVPVSCVLCPKTGGALLPVHELAENLVTQAPSATTEERLESVPMQGENGGISSQQQQPPPPLQQHQQQQEQQQQPGWCHVACAAGISEVKFAAPLFLNAVTRIADVPKARKNLICVYCRRENERARNEMLNSTHAAAATATVTVTTTSVASAPGDSSAMEGVQMQSMGAVDPAVSAKSRPPPSSSSSRGACMQCLKPKCAIAFHASCALAHGHFQIVSTDAIVKNGLLAEALCPSHTSTKKGAKVEKPPLSLGDAVWAKWSRDALYYPGVISGVCDMSSSADVIFEDGTLTSDLLWSELRPLGTER # ORIGINAL: g4971.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 24522 25295 . - . ID=g4971;Name=g4971.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 24522 25295 . - . ID=g4971.t1;Parent=g4971;Name=g4971.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 24522 25295 . - . ID=g4971.t1.exon1;Parent=g4971.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 24522 25295 . - 0 ID=cds.g4971.t1;Parent=g4971.t1 #PROT g4971.t1 g4971 MHPTATPTRRRTLPRALVVTPHPSASDLDDPNHFLKRVSAFLEAGALVQLRAKSVDRGQTETTSTHGDAQNLTRTTVPSKFSELARLASLLPGASERLVVNGDPSLAAELNIGVHLNGERLSSLKSRPLSMQPNALVGASCHDGDQLSAAIRVIGCDYVVISPVKQSVSCPTDRPLGWDGFRRLAGVVANELQLQTQSDSDDNVSRGCAVYALGGVGPNDASDAAENGAHGIAAISSFWSASNPTAAVNEVTQFPWP* # ORIGINAL: g4973.t1 original gene structure, not modified by PASA NODE_163_length_34035_cov_60.397 AUGUSTUS gene 31053 32420 . + . ID=g4973;Name=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS mRNA 31053 32420 . + . ID=g4973.t1;Parent=g4973;Name=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 31053 31265 . + . ID=g4973.t1.exon1;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 31053 31265 . + 0 ID=cds.g4973.t1;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 31625 31779 . + . ID=g4973.t1.exon2;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 31625 31779 . + 0 ID=cds.g4973.t1;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 32001 32103 . + . ID=g4973.t1.exon3;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 32001 32103 . + 1 ID=cds.g4973.t1;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS exon 32349 32420 . + . ID=g4973.t1.exon4;Parent=g4973.t1 NODE_163_length_34035_cov_60.397 AUGUSTUS CDS 32349 32420 . + 0 ID=cds.g4973.t1;Parent=g4973.t1 #PROT g4973.t1 g4973 MVKIYSGSHIFSTKWEDVTLAFWRKYSLESPQTRHVMCSDVIDRHVDPQTNCLHTRRLLVKTNSKPKWGDLISAAKWVYVVEDSVVDPVNKVMTTQTRNVMYTGILSVNEKCVYTVNDKNPDLTECKTTATIHAGVWGFRSRIENFAFERFKNNVQQARQAMQHVIEMMKNDRREPEHRQ* # PASA_UPDATE: g10683.t1, single gene model update, valid-1, status:[pasa:asmbl_2266,status:12], valid-1 NODE_1661_length_9924_cov_39.5544 . gene 4459 7510 . - . ID=g10683;Name=g10683.t1 NODE_1661_length_9924_cov_39.5544 . mRNA 4459 7510 . - . ID=g10683.t1;Parent=g10683;Name=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 7364 7510 . - . ID=g10683.t1.exon1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 7364 7510 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 7122 7180 . - . ID=g10683.t1.exon2;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 7122 7180 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 6896 7004 . - . ID=g10683.t1.exon3;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 6896 7004 . - 1 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 6277 6438 . - . ID=g10683.t1.exon4;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 6277 6438 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 5933 6051 . - . ID=g10683.t1.exon5;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 5933 6051 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 5567 5729 . - . ID=g10683.t1.exon6;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 5567 5729 . - 1 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 5281 5349 . - . ID=g10683.t1.exon7;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 5281 5349 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . exon 4459 5125 . - . ID=g10683.t1.exon8;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . CDS 4997 5125 . - 0 ID=cds.g10683.t1;Parent=g10683.t1 NODE_1661_length_9924_cov_39.5544 . three_prime_UTR 4459 4996 . - . ID=g10683.t1.utr3p1;Parent=g10683.t1 #PROT g10683.t1 g10683 MLESATSIPIAESASLLCGNLSSQTLPSGQTAFATISRSEVTISVVDGRGASSSMKVVDTDGSQVLQARWCPLLSKLVFVLATTRGFRIYEQDGGSLLYEHRLPRDTEAEQLLFCRGITSAHINNGRKHTVFIGCADSSILSVRISREIEASETYHGHESAISDLASDGKMLVSGDDGGAVVVWSADLMERRGKYEDPSKSPCTSVAVGKGAVIAAFGDGRIRVLDLRGRASIEIAAHARYIYAIDYDPLAGLLASVSEDSFLHLWQLPADGSAKEVSLVFSQKQTDRMICGVQFVSQGEALAVAVFESPSIKTFRRV* # ORIGINAL: g10685.t1 original gene structure, not modified by PASA NODE_1661_length_9924_cov_39.5544 AUGUSTUS gene 9073 9868 . - . ID=g10685;Name=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS mRNA 9073 9868 . - . ID=g10685.t1;Parent=g10685;Name=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 9517 9868 . - . ID=g10685.t1.exon1;Parent=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 9517 9868 . - 0 ID=cds.g10685.t1;Parent=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 9264 9370 . - . ID=g10685.t1.exon2;Parent=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 9264 9370 . - 2 ID=cds.g10685.t1;Parent=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 9073 9177 . - . ID=g10685.t1.exon3;Parent=g10685.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 9073 9177 . - 0 ID=cds.g10685.t1;Parent=g10685.t1 #PROT g10685.t1 g10685 MGQRTASKRKKHYQVHAVVSKTKKNRRGQNRHFKKLVVANPLVKAQWDVKQTLRQNMKRLGILNDPNEIAPLSAFVPKPKEFVLGANGLEEYKPEGGDAEEGAMRVEPAAEPTSLVKAFEEKAANGAAKVIHMAAGDAEFARVCILKHGDNYKAMARDLKLNTHQHTAKQLRNKCEEYIATFGAPNA* # PASA_UPDATE: g10682.t1, single gene model update, valid-1, status:[pasa:asmbl_2267,status:12], valid-1 NODE_1661_length_9924_cov_39.5544 . gene 1261 4447 . + . ID=g10682;Name=g10682.t1 NODE_1661_length_9924_cov_39.5544 . mRNA 1261 4447 . + . ID=g10682.t1;Parent=g10682;Name=g10682.t1 NODE_1661_length_9924_cov_39.5544 . five_prime_UTR 1261 1332 . + . ID=g10682.t1.utr5p1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 1261 1337 . + . ID=g10682.t1.exon1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 1333 1337 . + 0 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 1450 1547 . + . ID=g10682.t1.exon2;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 1450 1547 . + 1 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 1704 1785 . + . ID=g10682.t1.exon3;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 1704 1785 . + 2 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 1919 1972 . + . ID=g10682.t1.exon4;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 1919 1972 . + 1 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 2155 2316 . + . ID=g10682.t1.exon5;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 2155 2316 . + 1 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 2530 2623 . + . ID=g10682.t1.exon6;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 2530 2623 . + 1 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 2980 3705 . + . ID=g10682.t1.exon7;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 2980 3705 . + 0 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 3847 3928 . + . ID=g10682.t1.exon8;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 3847 3928 . + 0 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . exon 4252 4447 . + . ID=g10682.t1.exon9;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . CDS 4252 4307 . + 2 ID=cds.g10682.t1;Parent=g10682.t1 NODE_1661_length_9924_cov_39.5544 . three_prime_UTR 4308 4447 . + . ID=g10682.t1.utr3p1;Parent=g10682.t1 #PROT g10682.t1 g10682 MRVPTATLAVIFAIACAALVSAEVSLLDRSDLCDVCEIVTDELHELLKKTEKKREVFEIGGRMDASGRVKPKNKIQYKKSEVRLLEALDAVCPRMEDYRTNYWNKDLPKFVRKSESAKEEGAEVDMFSVDHVEGNSAQEMMEGIRDAIVGQFGHMAEDHSELRVACSNLLEEYEDEISEWYKGDQEESLKRVLCVDVLRGQGHRCYYYDVPVTREYLDKDTEDAIREADLADKEAKSKRNEEKETRRRLNQERMQNATARIEAQIEKEKKLEQKRLRDIERRKAEMARQKLALEEAARDLEEEEREQAARIAAIQGEEIAWLATLNQPEADAGGVEGEDAETVETSEAAETSENAEAKGAEEWDALQSTATDAGVNAAEQPAEDVGGSVTQPAPAEAASGAQKDTEDAKAIAAEIDAVLLRARKRYEELKAAGADEKTLRRYAAAFEAVSDD* # ORIGINAL: g10681.t1 original gene structure, not modified by PASA NODE_1661_length_9924_cov_39.5544 AUGUSTUS gene 235 896 . - . ID=g10681;Name=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS mRNA 235 896 . - . ID=g10681.t1;Parent=g10681;Name=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 810 896 . - . ID=g10681.t1.exon1;Parent=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 810 896 . - 0 ID=cds.g10681.t1;Parent=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 511 615 . - . ID=g10681.t1.exon2;Parent=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 511 615 . - 0 ID=cds.g10681.t1;Parent=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS exon 235 394 . - . ID=g10681.t1.exon3;Parent=g10681.t1 NODE_1661_length_9924_cov_39.5544 AUGUSTUS CDS 235 394 . - 0 ID=cds.g10681.t1;Parent=g10681.t1 #PROT g10681.t1 g10681 MATQKPKGDKEKDTVVDARFLSRRVWLVRIPNFLADALENADEEQEIGTLNIATESVQGRKRQKLTFNFKTENPELPVDFDFFAADAPADDKGKQPGPAPPESTKAVAAVFSENTTA # PASA_UPDATE: g10684.t1, single gene model update, valid-1, status:[pasa:asmbl_2268,status:12], valid-1 NODE_1661_length_9924_cov_39.5544 . gene 7761 8843 . + . ID=g10684;Name=g10684.t1 NODE_1661_length_9924_cov_39.5544 . mRNA 7761 8843 . + . ID=g10684.t1;Parent=g10684;Name=g10684.t1 NODE_1661_length_9924_cov_39.5544 . five_prime_UTR 7761 7843 . + . ID=g10684.t1.utr5p1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . exon 7761 7915 . + . ID=g10684.t1.exon1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . CDS 7844 7915 . + 0 ID=cds.g10684.t1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . exon 8060 8183 . + . ID=g10684.t1.exon2;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . CDS 8060 8183 . + 0 ID=cds.g10684.t1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . exon 8293 8359 . + . ID=g10684.t1.exon3;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . CDS 8293 8359 . + 2 ID=cds.g10684.t1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . exon 8618 8843 . + . ID=g10684.t1.exon4;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . CDS 8618 8789 . + 1 ID=cds.g10684.t1;Parent=g10684.t1 NODE_1661_length_9924_cov_39.5544 . three_prime_UTR 8790 8843 . + . ID=g10684.t1.utr3p1;Parent=g10684.t1 #PROT g10684.t1 g10684 MASANGCIFCKIAKGDPSTELLFEDEEFCAFKDIRPAARHHLLVIPKRHIDSAKELRNSEKDINIVRRMEEIARVLLSERGCTPQVSRLGFHWAPLVRINHLHLHAIAPQSELSFIGRALFCADSRWFSSPQATIEWLKQQQQQ* # PASA_UPDATE: g14102.t1, single gene model update, valid-1, status:[pasa:asmbl_8306,status:12],[pasa:asmbl_8307,status:12], valid-1 NODE_582_length_20633_cov_38.4006 . gene 148 7060 . + . ID=g14102;Name=g14102.t1 NODE_582_length_20633_cov_38.4006 . mRNA 148 7060 . + . ID=g14102.t1;Parent=g14102;Name=g14102.t1 NODE_582_length_20633_cov_38.4006 . five_prime_UTR 148 149 . + . ID=g14102.t1.utr5p1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 148 489 . + . ID=g14102.t1.exon1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 150 489 . + 0 ID=cds.g14102.t1;Parent=g14102.t1;5_prime_partial=true NODE_582_length_20633_cov_38.4006 . exon 768 1060 . + . ID=g14102.t1.exon2;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 768 1060 . + 2 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 1451 1706 . + . ID=g14102.t1.exon3;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 1451 1706 . + 0 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 1948 2484 . + . ID=g14102.t1.exon4;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 1948 2484 . + 2 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 2732 3144 . + . ID=g14102.t1.exon5;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 2732 3144 . + 2 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 3457 4259 . + . ID=g14102.t1.exon6;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 3457 4259 . + 0 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 4675 4756 . + . ID=g14102.t1.exon7;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 4675 4756 . + 1 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 5106 5272 . + . ID=g14102.t1.exon8;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 5106 5272 . + 0 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 5475 5660 . + . ID=g14102.t1.exon9;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 5475 5660 . + 1 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 5880 5933 . + . ID=g14102.t1.exon10;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 5880 5933 . + 1 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 6118 6193 . + . ID=g14102.t1.exon11;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 6118 6193 . + 1 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . exon 6533 7060 . + . ID=g14102.t1.exon12;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . CDS 6533 6955 . + 0 ID=cds.g14102.t1;Parent=g14102.t1 NODE_582_length_20633_cov_38.4006 . three_prime_UTR 6956 7060 . + . ID=g14102.t1.utr3p1;Parent=g14102.t1 #PROT g14102.t1 g14102 FTTGGSSIFPGLLGYAGHALSLGSPGLPLTGTIMCYIADSNSVTVLQAASAGTFTGCASSIDLSLVVADAPARLVTVSGAPASYGGEASLRCQFTTSAPSRLSDIVVSKTVRLDVGVVYEAKRVNLTLIDLTNDPYPALSAVFAAGASLGPSSPCRAVLVSGGVQLDSFTLPLVCGLAAADVGSGVASRITASLYEPTGNQQWSFAFQASATDFSKGGYVLVDGNRASPVKATFTNTRISGKSPLDFVSNFTIGWHVIEVVSVDGGAMATAGQSITFVRGTAASAPLTQASVRKIAQACPPGKYGASCTNNCVCSNGASQECDAVDGFCLACAAGWTGASCNQTCPSGSYGLRCLEKCACKNNAVCNPRDGSCDCATVSGWMGIQCADACAPGNYGPGCSRQCGCLNGGACDRFAGTCDCAAGWTGPTCADACLTGTYGANCARNCTQCGNGVCERFNGTCICGANTGYYGRLCSPCTCMNGGACADGLAGPGTCNCTQVLGFTGPQCATPCTALNAYGLNCVNSCQCDNGAVCGTADGTCKCALGWTGRRCDVLVAPSDPKVTYRFVSSNTSGDVSVILDWTHDEDLAGLPRAWPKWRYVIEKTGCPSIKTTVTDVTSFEDRQVNVNQKYLYSIGAVNARDVASRVVDIVVFVQKQERPLMPHSIIVTPTLTEDGLSPMLRITWKEDVSSGAITTTTIYRNGVFLVRVVLDTTYSDKNVVYGQSYAYSFVSTNAYGDSERAVADGTASVAPTTVSTPSAAKSSTDTGAVAGAVVGTVVGGIAVVLGVLFWRKKKALRKKEAIARSELDLIDTVVRRPEIAEIELPGSWVRLRDRIGEGEFGEVYRADVTLMEGGKAIVAAVKTFKVSPMCSLEEIRSARSAFMSEIDLMRNVVNHVNVIKMLGVVTQSEPNCLILEFAAHGDLRHYIMHKNANELSVMDLLCMCIDVARGMEHLSVTCQIVHRDLAARNCMVVAGPRPANPQERGWKIGQHAQVLVKIADFGLSRDTGVSGDYYRAKTSRRMPIKWMAIESLEKRVFTTATDLWSFGVVMWEVLARGAKPYAGLENHQVLEYLGNGNRLAIPKGCPRSVYSIMEACWRARPETRPVFSQLVVQLRRAMAGLASGRDELVDTTAEDDAASDKVYEMAPLMEDSKPTSSGYALHGGDSHEEGAGAGVYAMYSREPASITTTGNPMYLAEVDLGAESERHV* # ORIGINAL: g14103.t1 original gene structure, not modified by PASA NODE_582_length_20633_cov_38.4006 AUGUSTUS gene 7811 19018 . + . ID=g14103;Name=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS mRNA 7811 19018 . + . ID=g14103.t1;Parent=g14103;Name=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 7811 14745 . + . ID=g14103.t1.exon1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 7811 14745 . + 0 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 15064 15130 . + . ID=g14103.t1.exon2;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 15064 15130 . + 1 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 15503 15598 . + . ID=g14103.t1.exon3;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 15503 15598 . + 0 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 16001 16071 . + . ID=g14103.t1.exon4;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 16001 16071 . + 0 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 16326 16491 . + . ID=g14103.t1.exon5;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 16326 16491 . + 1 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 17032 17095 . + . ID=g14103.t1.exon6;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 17032 17095 . + 0 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 17891 17938 . + . ID=g14103.t1.exon7;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 17891 17938 . + 2 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 18114 18163 . + . ID=g14103.t1.exon8;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 18114 18163 . + 2 ID=cds.g14103.t1;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS exon 18488 19018 . + . ID=g14103.t1.exon9;Parent=g14103.t1 NODE_582_length_20633_cov_38.4006 AUGUSTUS CDS 18488 19018 . + 0 ID=cds.g14103.t1;Parent=g14103.t1 #PROT g14103.t1 g14103 MMARIVLSFTCFILVVGMQPLSAVAISSGVPLPSVSPSPTPTGSSLSALGRFASLVDAVDAVRLAIANGTPNISVVIENGDHGWLLASETLEIPSGISVLISASVDEDGAGNGTTTTAPRCAITFDAAVNASSAFIVRGNGSLAFADLTLLKESQGNATFASVDAEGTLRVTRCVVGFVSSLTSNGTTANVTDAVYPRTSSATPAAFAVLGNATFDAVSFYRDGGVGRNQTGYFVRAEGSASVRLARARYANSTSAILCADQSTVTLESCTFNACIGECITVSGNGVAFVRDFAAQLVGSGVFVAASGSGRVDISFGEIVTTPINDGNADAQDGICVALSATGSATFAVTDVRALLLSCSALFLTGYSRADFARVNVSVLAVPTAPFQLSDATLLRASELSVAAQYVPIVMSISGFSSVLIEGGNVSSTNRLFAISVYSMLAAVQVSFHTITLAENAIQASDSSHVFLQDCNMSGPVPNEIVLYMSFSAHAILAAGRSVVVMDGVAVHNCAGAVRATDFASVSMLRVVVQGSRQAPRLSSRGDTNPAAFGNIPDVFKGGVFWMDGSTFLTAESCIFLDLPTVVEGGVGALEGLAVAKLQNVSIAGAGGKGSTGAGFALSGSSMLTLADCSVQDTYTLIFYNRDLLPSIGGFGGVAMLRGFSRLSVDNLSVAHARAIRGSVFFLTDYASILATRVRCDSIVATTSGAVVDATGSSFVLLDDFNSSSIWVGAEGGVVMARDGASVNVRTANIFNTTSYRGGFASVLGGARVTWTASRMDLIVAAEHTFAFSQYVLTRNDPNLSALPAVYVLPKRQSSLLILAYGTAVFVDEFASLTMTDVSISRAQTEWSGGVVAIMAYGRVTANRMECVDISASGYGSVVYATESSGFVGNEMRISNVSVGRDGGSIFLSNRASLLITGIVVTNSHCKGYGGVVAVTEDANVFIVGINVTDTLAGIGGGVVYLSGFPVAVFRDLIVTRSHANEHGGVASLAQSSSMEFVGGSVQMSVATRDGGCFSVFDSSTLSLARSNLSGCHSDRNGGTLRVGAARNSETESIRQAGATLVDCILSDSSAGGDGGAVYAEAGTVELTRCSVSFSSASGNGGSLAMIGSASVLLESCAVISTATGGNGGLAILSDASALSLRNTSVAAISAPNGVGGTAFVADRASFTAASSTFTGMNCGGGSAFSMQMGTSLVALSSCTIADARNGLAASTITVRGAAVIRMSHVAGSNLTRPFGLGDGWLSADPEAILQYDNITCDACAKPSSLLTDPLEYLVPNATIREVPLFTYGEPLSAHMDAILGGGVTVFTGFGRVDGTGITIRTNSSFGIAVAGFSNAQLSLGGTTFMGAVTFFDSTIVVERTGSVGFRSWGAPIPVSIGQSAVEVRGFLEMVSVIFSNSRVAVVGTGSLRCVGCIFYGRSLVTVTSAADTSTFILLGSAMAVLSATSVLMAGDVASRFALVSESAVLRIDGGSVDALSAVGNGGFLQADNGGAGTSQRISVSDFNAGSASTTAGSGGFISLAGSAAAVLRRCTIDSASALQSGGFAHVIDTAQLSVFDAIIKEPTASRRTGGGLVHLGGSAVATFDNVFIAKSTASGGYGGIARVDSDDESKNPNLPTLTLTNCQVQSAQATLGGGGFFLRGAHLVIFNSTFNQSSALLSSGGGVIMTSGDRPSDVSLVGCAFNDGSAGGDGGLVYVTDASAVVVCACTVRNISAGYDGGLATLTGAGSVDVQSSSVDGVSAGGGGGAFFASVGLLSVSDSVFARSSAHLEGGFASILGTGRAVFRNNTVSDTRSLYMSGGAFSVSGLASLRADALRISGVTSPGSGGAFVVNGQADVTLVRSALAHSRSEFGSGGSFVVLGTATLSMTDTSVMNSSANVDGGAICALGSSMVTANNVSFTNVSSPNGNGGALSLSDRTSAALVSVRVEYAFADLKRGFGGALHVSDAAAVVADRFVSSHTSASQGGAFSLAGVTASLMLTGATAASASANQHGGCISAVSGALSVDGGSFTDCRANLHESSYGVGGFLYAEEGASRTMRLARLNVTSSYAAAGPVVFTATTFNASGVFTYVQDFVAAVDDGASAFLTPPVRLVVGLLSGGAVGDRPFGSLQSGSYLPHFNLDLADGYSRRAFASPSSPLTVQLYVSQSETPDTTVRRRDANGNCTVSGDLVQTFSLSSRVTFSNVRLSSPSAAICTLKFRSGNRLYSNDDSLFNTSVQVPVAPCSPGSISVLEQETGLYVCTVQQTTMPASSDNTGTIVAIVAPIAVSALAVCGVAFIIARRARRKWNEKQLESLAKHLQSTQPGMADLELRREAIDLQNILGEGAFGVVYRAQLVDGTRIRTCAAKALKENVAVDQRIEFMSEAQIMMSLKHKNIINLVGVITASDPMLIVLEYAEHGSLLSFLHKLSKRRDNPGMNTSVLFGRLATSIAYGMAYLVQQNIVHKDLAARNIMVSVDAFSEVQAKVRSAVPVKWTAPECLRQDVWSFGVVLWEIYSFGLVPYPGISNTEVLEWLMGGRRMEQPPDCPSDVYGIMHECWLLEPAKRPSFSSLADRFNAAHNSTVTVRRRPSKLGVKSPDNPAAPPGVVSFRPYDNDLSSSVLSASHPYDNSLGFSKPTDVDSGDLKRYSTASMGALSLSSIAVTSPRVYDNVFDPNAVEGPDCTSLGYIVIEESTV* # PASA_UPDATE: g5057.t1, single gene model update, valid-1, status:[pasa:asmbl_1863,status:12], valid-1 NODE_1527_length_10719_cov_34.8338 . gene 378 3297 . - . ID=g5057;Name=g5057.t1 NODE_1527_length_10719_cov_34.8338 . mRNA 378 3297 . - . ID=g5057.t1;Parent=g5057;Name=g5057.t1 NODE_1527_length_10719_cov_34.8338 . five_prime_UTR 3248 3297 . - . ID=g5057.t1.utr5p1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 3137 3297 . - . ID=g5057.t1.exon1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 3137 3247 . - 0 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 2743 2928 . - . ID=g5057.t1.exon2;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 2743 2928 . - 0 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 2336 2556 . - . ID=g5057.t1.exon3;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 2336 2556 . - 0 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 1833 1910 . - . ID=g5057.t1.exon4;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 1833 1910 . - 1 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 1632 1696 . - . ID=g5057.t1.exon5;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 1632 1696 . - 1 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 1267 1358 . - . ID=g5057.t1.exon6;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 1267 1358 . - 2 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 817 926 . - . ID=g5057.t1.exon7;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 817 926 . - 0 ID=cds.g5057.t1;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . exon 378 512 . - . ID=g5057.t1.exon8;Parent=g5057.t1 NODE_1527_length_10719_cov_34.8338 . CDS 378 512 . - 1 ID=cds.g5057.t1;Parent=g5057.t1;3_prime_partial=true #PROT g5057.t1 g5057 MADTPQHTELVEQFRGITGSSLEHAEFYLASADWSLDGAVCNFFDSNDQIDSESSAPPTRAAALNATQHSINGSNNNDIALDTDDSDEDWQPSADDQEPLDTNPGHTAVRASARPQPIALSQPSFNQPSSRKRTHSNMSKRIVSLNDFKEKDKDDNDSGDEPNQYYAGGSEKSGQLIEDPKKPKARDDVVKSMFDQARANGAVPVEEEAAAKKPRTFVGGGRRLGDTLEEAAPAAPAVAQTPTEPAEVDAPTTHMLTFWRNGFTIDDGELRSLDDPANREFLADINQGRAPRELTRNSRHGVNINLQDRRTEDYVAPKRSIKAFHGQGQMLG # PASA_UPDATE: g5060.t1, single gene model update, valid-1, status:[pasa:asmbl_1866,status:3], valid-1 NODE_1527_length_10719_cov_34.8338 . gene 8558 9861 . + . ID=g5060;Name=g5060.t1 NODE_1527_length_10719_cov_34.8338 . mRNA 8558 9861 . + . ID=g5060.t1;Parent=g5060;Name=g5060.t1 NODE_1527_length_10719_cov_34.8338 . five_prime_UTR 8558 8627 . + . ID=g5060.t1.utr5p1;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . exon 8558 8630 . + . ID=g5060.t1.exon1;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . CDS 8628 8630 . + 0 ID=cds.g5060.t1;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . exon 8829 9085 . + . ID=g5060.t1.exon2;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . CDS 8829 9085 . + 0 ID=cds.g5060.t1;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . exon 9253 9861 . + . ID=g5060.t1.exon3;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . CDS 9253 9415 . + 1 ID=cds.g5060.t1;Parent=g5060.t1 NODE_1527_length_10719_cov_34.8338 . three_prime_UTR 9416 9861 . + . ID=g5060.t1.utr3p1;Parent=g5060.t1 #PROT g5060.t1 g5060 MASGVTVHDDVVTKFNDMKLRSSSKYIIFKLNDTFSEIVVEKTAPIEASYDDFMKDIPKDDCRYAVFDFDFTTKDGGKRNKLTFFVWAPNTAKIKAKMLYASSKDAVRKKLVGIATEIQATDASEIDFEEVLDKVSSRDK* # PASA_UPDATE: g5058.t1_g5059.t1, single gene model update, valid-1, status:[pasa:asmbl_1864,status:12],[pasa:asmbl_1865,status:12], valid-1 NODE_1527_length_10719_cov_34.8338 . gene 3946 7583 . - . ID=g5058_g5059;Name=MERGED%3A%20g5058.t1 NODE_1527_length_10719_cov_34.8338 . mRNA 3946 7583 . - . ID=g5058.t1_g5059.t1;Parent=g5058_g5059;Name=MERGED%3A%20g5058.t1 NODE_1527_length_10719_cov_34.8338 . five_prime_UTR 7525 7583 . - . ID=g5058.t1_g5059.t1.utr5p1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . exon 7431 7583 . - . ID=g5058.t1_g5059.t1.exon1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . CDS 7431 7524 . - 0 ID=cds.g5058.t1_g5059.t1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . exon 7146 7268 . - . ID=g5058.t1_g5059.t1.exon2;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . CDS 7146 7268 . - 2 ID=cds.g5058.t1_g5059.t1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . exon 5915 6024 . - . ID=g5058.t1_g5059.t1.exon3;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . CDS 5915 6024 . - 2 ID=cds.g5058.t1_g5059.t1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . exon 5274 5439 . - . ID=g5058.t1_g5059.t1.exon4;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . CDS 5274 5439 . - 0 ID=cds.g5058.t1_g5059.t1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . exon 3946 4944 . - . ID=g5058.t1_g5059.t1.exon5;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . CDS 4598 4944 . - 2 ID=cds.g5058.t1_g5059.t1;Parent=g5058.t1_g5059.t1 NODE_1527_length_10719_cov_34.8338 . three_prime_UTR 3946 4597 . - . ID=g5058.t1_g5059.t1.utr3p1;Parent=g5058.t1_g5059.t1 #PROT g5058.t1_g5059.t1 g5058_g5059 MVLEALSRILLSPRTTSPLGVCSMNGGTGPIRDTPHRIVHSDTISPGTATTANLERAGEHFGNDTSESSEFTEEENVDEDTEVIEEAAETLYGLIHARYILTNRGISQMVEKYQSGEFGRCPRYFCDNQPLLPIGLSDTPNESTVKMFCPRCEEAYLPRSSRHHNLDGAYFGTSFAQMLFAVHPELRPERATSRYVPRLYGFKIHPSAYEIGKPLGQNVALARAYADADGQQQRLPSNSNLGGTRTAGNGPAGAAAVGGAGAAGVPLAAGTPAAAAVRK* # ORIGINAL: g13222.t1 original gene structure, not modified by PASA NODE_1209_length_13000_cov_54.8128 AUGUSTUS gene 6438 9149 . + . ID=g13222;Name=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS mRNA 6438 9149 . + . ID=g13222.t1;Parent=g13222;Name=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 6438 6599 . + . ID=g13222.t1.exon1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 6438 6599 . + 0 ID=cds.g13222.t1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 6985 7131 . + . ID=g13222.t1.exon2;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 6985 7131 . + 0 ID=cds.g13222.t1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 7435 7558 . + . ID=g13222.t1.exon3;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 7435 7558 . + 0 ID=cds.g13222.t1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 7716 7927 . + . ID=g13222.t1.exon4;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 7716 7927 . + 2 ID=cds.g13222.t1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 8215 8748 . + . ID=g13222.t1.exon5;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 8215 8748 . + 0 ID=cds.g13222.t1;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 9090 9149 . + . ID=g13222.t1.exon6;Parent=g13222.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 9090 9149 . + 0 ID=cds.g13222.t1;Parent=g13222.t1 #PROT g13222.t1 g13222 MPNPSTFPFDKISFTVKEDPDRPIELTGAELETALQYSPTPGITGLVDMLVDLQANEHKPPLGSASLSVCVSTGSQDALSKVRDSRLHFVFFSNMSVIIQLEQAFEMCVSKEDSLLVEIPTYSGSLAHLVPLGCKLVGVETDELGLRPESLESVLNGWSEARDGRRPRVLYVIPTGANPSGGTLNTERRKRLYDIARRPENNLLIIEDDPYYYLQFGGEGDGKRYPSLLSMDVDGRVLRFDSFSKILSSGLRTGWVTGPKPLVERIEMHMQSTSLHPSGLSQAVVLALLRRWKQEGNGFEKHVRSVCDFYLRQRDAFLESADRHLTGLAEWNRPTAGMFVWIRLLGVEDSQALIQTRAVEKKVLLVPGVAFMPDARKTPYVRAAYSTATPQEMDEALKRLAALLRDEQSRRA* # ORIGINAL: g13224.t1 original gene structure, not modified by PASA NODE_1209_length_13000_cov_54.8128 AUGUSTUS gene 12167 12908 . + . ID=g13224;Name=g13224.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS mRNA 12167 12908 . + . ID=g13224.t1;Parent=g13224;Name=g13224.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 12167 12281 . + . ID=g13224.t1.exon1;Parent=g13224.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 12167 12281 . + 0 ID=cds.g13224.t1;Parent=g13224.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 12403 12908 . + . ID=g13224.t1.exon2;Parent=g13224.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 12403 12908 . + 2 ID=cds.g13224.t1;Parent=g13224.t1 #PROT g13224.t1 g13224 MAPNIFSSAVSESKEYAVAREVTDLLIASMHMPYIGEDVTQCEHMTQAAYFAEHDGAPEAVIVAALCHDLGHICVGPDAPRMGPPDVGVEKHEDAGAEYLRDRGFPREICEMVRAHVNAKRYLVTVRGDDYYASLSAASRQTLEFQGGRMTPEERIAFEADPLFESKVRVRKYDELSKVSPHPEYIPSPDAYIPMIVRVLLAARGS* # ORIGINAL: g13223.t1 original gene structure, not modified by PASA NODE_1209_length_13000_cov_54.8128 AUGUSTUS gene 10115 11271 . + . ID=g13223;Name=g13223.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS mRNA 10115 11271 . + . ID=g13223.t1;Parent=g13223;Name=g13223.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 10115 11041 . + . ID=g13223.t1.exon1;Parent=g13223.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 10115 11041 . + 0 ID=cds.g13223.t1;Parent=g13223.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS exon 11173 11271 . + . ID=g13223.t1.exon2;Parent=g13223.t1 NODE_1209_length_13000_cov_54.8128 AUGUSTUS CDS 11173 11271 . + 0 ID=cds.g13223.t1;Parent=g13223.t1 #PROT g13223.t1 g13223 MRYMLVAFIALAASVAAADLNAFAEWKITHGKAYNTPELEAYRRSVWADNVAKIERHNSEGHSFTLAMNHLGDLTEDEYRQLYLWSVPFAALVDSASRNITTRALADAEAADAAINAGADDPDKDASVDWREKKIVAEVKNQGQCGSCWAFAAIAALESQHALKTGSLVSLSEQQLVDCSGRYGNQGCSGGLMDNGYKYLEAVGGAEKEEVYPYKTAQGTCAFKKSEIVATIKGHKDLPSGDEAALAKAVREVGPIAVAIDASAITFQFYSKGVYVEPACSSSQLDHGVTVVGVGSDADKADYYIVKNSWGLQWGNQGYILMARNKKNQCGVATVASYPLV* # PASA_UPDATE: g13221.t1, single gene model update, valid-1, status:[pasa:asmbl_810,status:3], valid-1 NODE_1209_length_13000_cov_54.8128 . gene 758 2943 . - . ID=g13221;Name=g13221.t1 NODE_1209_length_13000_cov_54.8128 . mRNA 758 2943 . - . ID=g13221.t1;Parent=g13221;Name=g13221.t1 NODE_1209_length_13000_cov_54.8128 . five_prime_UTR 2732 2943 . - . ID=g13221.t1.utr5p1;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . exon 2612 2943 . - . ID=g13221.t1.exon1;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . CDS 2612 2731 . - 0 ID=cds.g13221.t1;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . exon 2253 2439 . - . ID=g13221.t1.exon2;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . CDS 2253 2439 . - 0 ID=cds.g13221.t1;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . exon 758 2150 . - . ID=g13221.t1.exon3;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . CDS 835 2150 . - 2 ID=cds.g13221.t1;Parent=g13221.t1 NODE_1209_length_13000_cov_54.8128 . three_prime_UTR 758 834 . - . ID=g13221.t1.utr3p1;Parent=g13221.t1 #PROT g13221.t1 g13221 MESPRGSRTGSTRKVSFATDADAPVIKRSSVERCRNPACEEMRDIVAELRLDNKKWQAEVLRLRELLTSLGHPDRSTPSHSPRGSSVSSPSMERRKSLAKDAASLVHNDIKHKSADAIISSPSDVASTSSTFASPTRNPTESSTQAVSTNEAPAERRRSSCTGVDGVLPPPEELFERVDPRFRSGSEVSDGSVIVDEAMESKKNSSPLTDTAPDAGSLPHGHADDDSNAKEGHFVKEIRSFMSMFVGSLFDAGRSLSEEDKSRFGKLCESEAGRLWFARTLDRHRSNTMQVADVTFFRLMQFVSVALNECTLADDFGPAKILMNMCFTFYRLHEGDEREYLHTQLSSQPIWQSLRFWQAALFNSVAHERSRKRAMSGGNKWSQLSDTQREESIVSDSNIVFGQLGTFTANMLSLGVPREACEHFLEKMAVIGDLGDEQKALLFDNIERLSPRVLRITLERDRLIGFGFALRIVDGVVKVSSVLPLSPAARCGRMRTGDVVVSINGQSCDGMISQALVRTVKGLGHTVTLELKDVPSALSD* # ORIGINAL: g713.t1 original gene structure, not modified by PASA NODE_1394_length_11622_cov_39.3458 AUGUSTUS gene 7488 11296 . + . ID=g713;Name=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS mRNA 7488 11296 . + . ID=g713.t1;Parent=g713;Name=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 7488 7763 . + . ID=g713.t1.exon1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 7488 7763 . + 0 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 8136 8186 . + . ID=g713.t1.exon2;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 8136 8186 . + 0 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 8456 8503 . + . ID=g713.t1.exon3;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 8456 8503 . + 0 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 8701 8907 . + . ID=g713.t1.exon4;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 8701 8907 . + 0 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 9541 9617 . + . ID=g713.t1.exon5;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 9541 9617 . + 0 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 9768 9884 . + . ID=g713.t1.exon6;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 9768 9884 . + 1 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 10276 10361 . + . ID=g713.t1.exon7;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 10276 10361 . + 1 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 10693 10786 . + . ID=g713.t1.exon8;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 10693 10786 . + 2 ID=cds.g713.t1;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 11164 11296 . + . ID=g713.t1.exon9;Parent=g713.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 11164 11296 . + 1 ID=cds.g713.t1;Parent=g713.t1 #PROT g713.t1 g713 MVEGSRGKPKALELDGHATQHKQVRAASVAAVGGSASNDEECSTSYPMKAAEKAGLLKSSRRPSDSKTQSATSLPIHSAKPNDRLSPAKIPKAGKTLGSNIALAKTSGKASPFPTVPPISGPALEINLPDDAILPVDTAAVAMEAESLWDAIDRKCAALSRAEPVIKQRSKGEWATARIFVSSTFKDMFSEREAVVKRVIPELKYQCRRFRVNVFECDLRWGIPKDASTEETVSTCMFEIDRCVKENENPFVVAFVGERFGWIPASDQIPANLRDDVQWEDGFSITAMELLRGVYRDLNPNAFVFMRDSSSFIGPSDHVEPLSKIADKRTPSDIRSIRANFLDWSIGGHVDGGKSIEPPYFE* # ORIGINAL: g712.t1 original gene structure, not modified by PASA NODE_1394_length_11622_cov_39.3458 AUGUSTUS gene 2815 6371 . - . ID=g712;Name=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS mRNA 2815 6371 . - . ID=g712.t1;Parent=g712;Name=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 6112 6371 . - . ID=g712.t1.exon1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 6112 6371 . - 0 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 5706 5812 . - . ID=g712.t1.exon2;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 5706 5812 . - 1 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 4909 5000 . - . ID=g712.t1.exon3;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 4909 5000 . - 2 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 4542 4631 . - . ID=g712.t1.exon4;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 4542 4631 . - 0 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 4043 4159 . - . ID=g712.t1.exon5;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 4043 4159 . - 0 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 3732 3841 . - . ID=g712.t1.exon6;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 3732 3841 . - 0 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 3429 3526 . - . ID=g712.t1.exon7;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 3429 3526 . - 1 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 3127 3243 . - . ID=g712.t1.exon8;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 3127 3243 . - 2 ID=cds.g712.t1;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS exon 2815 2945 . - . ID=g712.t1.exon9;Parent=g712.t1 NODE_1394_length_11622_cov_39.3458 AUGUSTUS CDS 2815 2945 . - 2 ID=cds.g712.t1;Parent=g712.t1 #PROT g712.t1 g712 MLSSANSQKSQSSDANGGPGATLTRPAVNIESRADVKTDMTSGTSREHSSIYRQSHVSPTPHLRTPRPDEEERLARICVDAFTTFSRRHNYEPYLPEGDEPMRQMMHYFISGGNPSIRSICADVQGRAVGSNFIMADGDTVGVGPITVDQTISACGIGKALMKWAIKEGYALSNNIKSVRLVQEAFNRVSFSLYAKLGFNPCEQISILRMDHAAKKVTSHVDISRFEVRKGAISDITACQELCNSVTGMRRSLLLAHGGVRPDLFVAVSQHGKIAAYTTGFNQFSHSVASSENALMALLVYHCNELPGHINPIAAGTSTVDLFCIGRTNPGILQWALDTGFRLDRQCTLMCHRDGEYKHLVQDGTAYIPGIYF* # PASA_UPDATE: g711.t1, single gene model update, valid-1, status:[pasa:asmbl_1449,status:12], valid-1 NODE_1394_length_11622_cov_39.3458 . gene 276 2657 . + . ID=g711;Name=g711.t1 NODE_1394_length_11622_cov_39.3458 . mRNA 276 2657 . + . ID=g711.t1;Parent=g711;Name=g711.t1 NODE_1394_length_11622_cov_39.3458 . five_prime_UTR 276 276 . + . ID=g711.t1.utr5p1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . exon 276 318 . + . ID=g711.t1.exon1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 277 318 . + 0 ID=cds.g711.t1;Parent=g711.t1;5_prime_partial=true NODE_1394_length_11622_cov_39.3458 . exon 689 877 . + . ID=g711.t1.exon2;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 689 877 . + 0 ID=cds.g711.t1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . exon 1096 1225 . + . ID=g711.t1.exon3;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 1096 1225 . + 0 ID=cds.g711.t1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . exon 1620 1686 . + . ID=g711.t1.exon4;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 1620 1686 . + 2 ID=cds.g711.t1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . exon 1923 2049 . + . ID=g711.t1.exon5;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 1923 2049 . + 1 ID=cds.g711.t1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . exon 2277 2657 . + . ID=g711.t1.exon6;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . CDS 2277 2372 . + 0 ID=cds.g711.t1;Parent=g711.t1 NODE_1394_length_11622_cov_39.3458 . three_prime_UTR 2373 2657 . + . ID=g711.t1.utr3p1;Parent=g711.t1 #PROT g711.t1 g711 RYNLYKVGPVISVSHGMGIPSMSIMLHEITKLLAYAGATDVVYIRIGSSGGLGVPPGSIVITDEALDGELNAYHTLKINGKSVQRPAVLDRKLADEIYSLAEPGINVVIGKTICAEDFYEGQARLDGAICEHTHDEKLEFLKRAHDMGVRNVEMESLVFAAFTTKLNIPGVVICATYLNRLDGDQIDTPADVLKEYSDRPQRLAVRFMKHRLGLPL* # PASA_UPDATE: g12184.t1, single gene model update, valid-1, status:[pasa:asmbl_5853,status:12], valid-1 NODE_3294_length_3805_cov_40.4474 . gene 299 3583 . + . ID=g12184;Name=g12184.t1 NODE_3294_length_3805_cov_40.4474 . mRNA 299 3583 . + . ID=g12184.t1;Parent=g12184;Name=g12184.t1 NODE_3294_length_3805_cov_40.4474 . five_prime_UTR 299 397 . + . ID=g12184.t1.utr5p1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 299 426 . + . ID=g12184.t1.exon1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 398 426 . + 0 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 630 761 . + . ID=g12184.t1.exon2;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 630 761 . + 1 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 1025 1140 . + . ID=g12184.t1.exon3;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 1025 1140 . + 1 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 1436 1522 . + . ID=g12184.t1.exon4;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 1436 1522 . + 2 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 1817 1964 . + . ID=g12184.t1.exon5;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 1817 1964 . + 2 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 2267 2345 . + . ID=g12184.t1.exon6;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 2267 2345 . + 1 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 2604 2899 . + . ID=g12184.t1.exon7;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 2604 2899 . + 0 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 3030 3177 . + . ID=g12184.t1.exon8;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 3030 3177 . + 1 ID=cds.g12184.t1;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . exon 3387 3583 . + . ID=g12184.t1.exon9;Parent=g12184.t1 NODE_3294_length_3805_cov_40.4474 . CDS 3387 3583 . + 0 ID=cds.g12184.t1;Parent=g12184.t1;3_prime_partial=true #PROT g12184.t1 g12184 MRRWNSASERRNCLIFVLVGLPARGKSYISKKILNYLTWKGVRAKLYNVGNKRRQVCEGVQSADFFSQTNADAAKARENLAFDVFGELLGWLAHGGEVALFDATNTTRERRAAIVQHVQASGVRANLIFLESICDDKAVLQSNFDQKISNSPDYVTMPREAAIADLQQRIANYERVYETVSDDENISYVKLINLQSKVICNNIRGNLAHVVVAYLMSIHVIPRPIWLVRAGSDRLARRSSLGEKPRSHSRDEQDTAFKPQDYVSMVGKRHSSEGPTELVTQKFSGCLAAFVEERIGELVPGGVNDLLVYSSLLPRAMDAIADLPVQQIQIEYWSALNPLNAGDCQGLSMEEIKTKRPDVHESWSRDPFNFRMPGGGESYRDLVLRLDPLISEMERIDTGMLIVSHLSTLQ # ORIGINAL: g82.t1 original gene structure, not modified by PASA NODE_2807_length_5080_cov_28.411 AUGUSTUS gene 71 4846 . - . ID=g82;Name=g82.t1 NODE_2807_length_5080_cov_28.411 AUGUSTUS mRNA 71 4846 . - . ID=g82.t1;Parent=g82;Name=g82.t1 NODE_2807_length_5080_cov_28.411 AUGUSTUS exon 71 4846 . - . ID=g82.t1.exon1;Parent=g82.t1 NODE_2807_length_5080_cov_28.411 AUGUSTUS CDS 71 4846 . - 0 ID=cds.g82.t1;Parent=g82.t1 #PROT g82.t1 g82 MSETRVERPRFGGQPTDRLSVFQRRWMAYEEALRTPLKERQRAIGLVEACEANITARVSAILANLFAVSPGLNIGPMDSAEMVRIAIWSEYGIVARALEVRDASERPSFAAQLDRVGARTAEASLEWLEEIMATLAPTVAARLLTTRGLRKKETLDIKVDDDESIERYRGWLNEVQSGRSLEYKRALIHTAMANPVIHIAEATYPKSFQRELAETYGALRHFMMTRFGRSAFGINLLTKYLELGGVEEAIVLLRQARDGGQLESIFGRGEKGKRIDGSTGTATTEKSAQGGSSSTATQNGRAKASKSAPRAGESAAGAQRDGGSRKESSSEKDGGSERQLRCWVCESPEHRARDCPVKRARGGATIAAFAAVARDDVPDLVTDSESSDDEDDEPFETWTHDGTIVIGGAMRKGVASVLFDSGASTCGVSHTACRRFNIPVKIPDVKEVPFRGVGKGVVRPVGRVDGDVEVRIGEHGTTQLRGVRVFEDLPGQTDVLLGYGRLKKMGVLGAATVAAMERGVDATFADIVGASLASAKDDRIGVDDAALSVWLPDGECTTVNRDDFKHLTAAGVPDVKVDKVVVAINERGWRDGARLGMAFPPAELKLKEGAPPARISYPLRSPAKRAALRADIEKALKGGLIRRLTRAEARRVRYVTVPSLSLKPDGTYRMAIDYRNINGFIEVGERTEIPREDEYLSRLAENCVFSVMDAVKGYWQRRLSPESQLLTAFQDTSADEYVVYVWLVLPFGITNAGDLFQDAMSRCLRETRARAYIDDIGLGSKSYAWHVEELLEVLAALRERNVFLRIAKCQFFKSEVIALGRQVSAAGVTVPESAMQGIRDLAVPKGRDDVRSAYQALTWWARFVPNFAIIGAPISDLLKSERRFKWGPDQQAAYDALKEAICSAKPVLPPDYTHPMVLTTDASRVGVGAVLYRTDDGDRRVVACASAKWSAAEANYRHTGELEALGIVWGALKFETYLSGVSHPFVVETDHQPLVTLFGGIDKISSSVTKRRIRRWAEILSQFKFRIRHVPGTEMGMTDALSRLPTSHDALLERKGERIIAAASAASADALAEAQAVDVNAGTLTAVPAEQDGRRRKAIEALVRIIHEQLSHAGTTRVEAHVRARYTDWDDVRNIVRMVVRTCQVCQAAGDAREHETIVPLRPLPIVTRPLERVAIDLLSLVRSTGGARYVFGAQDAATKFMWLVPMTSKASEDVVLVFMANILPWGVPARVQHDAGSEFDNDVFAAFCKSYAIERHMTSIDRPQANGQIERGFSTAIDWMRKDMAHHQTERWEYAVARVANAYNNSVSSTTGKTPYELMRGELPQLPVDRQIGWKPVVRYVDEAQLRERLTAAQAVQRAVADKRATILEAPTYVKGDMVMVRVRSGERKNKTAARWSGPFPIEGEAGPDKYEARTGRRCITAHVSDLKRHEPLPTTPQEDVASADLPAPPLETGGALTIPAAADAPDRTIRMAGTAAFTTWVWTHPWAARAGDEDVTRTRKALSTKAGRAFAYTMGSPLRGWMAYCGSVGRDAMLTPTAEEMDAWVAREGGQDSTKSQRRYVVRRAYRFVDEPVFRAELTERFLGAQKEW* # ORIGINAL: g1961.t1 original gene structure, not modified by PASA NODE_2320_length_6745_cov_28.1415_potentialcontaminant AUGUSTUS gene 2897 4075 . + . ID=g1961;Name=g1961.t1 NODE_2320_length_6745_cov_28.1415_potentialcontaminant AUGUSTUS mRNA 2897 4075 . + . ID=g1961.t1;Parent=g1961;Name=g1961.t1 NODE_2320_length_6745_cov_28.1415_potentialcontaminant AUGUSTUS exon 2897 4075 . + . ID=g1961.t1.exon1;Parent=g1961.t1 NODE_2320_length_6745_cov_28.1415_potentialcontaminant AUGUSTUS CDS 2897 4075 . + 0 ID=cds.g1961.t1;Parent=g1961.t1 #PROT g1961.t1 g1961 MDKNAPKSGRIVVLTTTNAKEDEIRMKAIEDSKALTDTAGGKLTRGVKLLYSVDVSDTRAVLRCVKDKLADYAISGTVFHIDIETAKDTIYDCDGIKNSITSIRHTIVDKKRMSGRAFLIIQEDDGEAIALLNNQMDFITFLRTFTTQTDEFIEQYLALEEGKTKNSIFSVEFRFLANWLGVQPYNLRPRLKTFEEGVDFVKLTRQDGKTEIRLTMECAKSIALTSKGPLADNVRLYFIELEELLKKYKCLIVQSLENRLKQVTEHHTVFDYPHAMSIYAFWCDDEKELAKIGRTEDLRERMHPTGRGGKVKIFYRLDVCDINAVERCVKTFLKEFQYRGKAEVYKVEKEVIISTIEQCNKLFGSPNTKTEYTDPRKITDTGNTYMAFAPMT* # ORIGINAL: g13704.t1 original gene structure, not modified by PASA NODE_2584_length_5790_cov_38.7991 AUGUSTUS gene 2251 4609 . - . ID=g13704;Name=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS mRNA 2251 4609 . - . ID=g13704.t1;Parent=g13704;Name=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 4400 4609 . - . ID=g13704.t1.exon1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 4400 4609 . - 0 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 4151 4228 . - . ID=g13704.t1.exon2;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 4151 4228 . - 0 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 3953 4056 . - . ID=g13704.t1.exon3;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 3953 4056 . - 0 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 3660 3742 . - . ID=g13704.t1.exon4;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 3660 3742 . - 1 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 3329 3507 . - . ID=g13704.t1.exon5;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 3329 3507 . - 2 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 3059 3157 . - . ID=g13704.t1.exon6;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 3059 3157 . - 0 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 2757 2880 . - . ID=g13704.t1.exon7;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 2757 2880 . - 0 ID=cds.g13704.t1;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 2251 2510 . - . ID=g13704.t1.exon8;Parent=g13704.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 2251 2510 . - 2 ID=cds.g13704.t1;Parent=g13704.t1 #PROT g13704.t1 g13704 MHSIAIPQGARGGAQQQQRPIAQSPQRQQQQLQQQQQQQGHPQRSGGMEDPSVVRQMLRADPGLIARLRMNGEGELADAAMSEDPTQFESLWTQRQAAERASRDEREKAYRLLASDPFNIEAQKLLEEAIRKENVNQNYLNALEHVPESFTHIHMLYIDAEIQNTPVKVFVDSGAQMTIMSLPCAERCGLLRLLDDRFQGVAKGVGSAKILGRVHVAPMKIGNEVLPCTFTILENSDIECLLGLDMLRRHQCCIDLQKNVLKIGSTNTETPFLAEQELPDWAKRADSIKAEAEGADIVSGASQPSTPGLPNPAPQQQLPRATSAVGGQASNPSASFPAEIINNLTAMGFPREAVLAALEASGGNADVAAQFLLSSFQD* # ORIGINAL: g13703.t1 original gene structure, not modified by PASA NODE_2584_length_5790_cov_38.7991 AUGUSTUS gene 2 1520 . + . ID=g13703;Name=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS mRNA 2 1520 . + . ID=g13703.t1;Parent=g13703;Name=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 2 689 . + . ID=g13703.t1.exon1;Parent=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 2 689 . + 1 ID=cds.g13703.t1;Parent=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 913 1015 . + . ID=g13703.t1.exon2;Parent=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 913 1015 . + 0 ID=cds.g13703.t1;Parent=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS exon 1249 1520 . + . ID=g13703.t1.exon3;Parent=g13703.t1 NODE_2584_length_5790_cov_38.7991 AUGUSTUS CDS 1249 1520 . + 2 ID=cds.g13703.t1;Parent=g13703.t1 #PROT g13703.t1 g13703 GYYCRYSGRGLWFDAPTVSLKDRKWRILPSCGALDLPESEKATTYATIGDVFSAARDGGPTFDAYCAHIRSAIAADVAHTGHMSFGALVLEPVLHGANGMVMIDPQFQRALVHVCKSELGIPVICDEVFVGSYRCGPATASSLLRITPDIAAYGKLLTGGHVPLGVTLASSRVFDAFLGDSKAQALLHGHSFTAYPIGCAAALHALSMYHQSPFYMSDSNTMASPWPEEVMHRLSEHKLVGRVVSIGLMFAVEVDNKQSVAVNGASSVGMVARIIRHMRLQSNIFARPLGTVIYVMASPMTTGNWCERMLLSLERALDAAAVDCAEGSAPGTARVSAGMAERKTLPTEDGVIC* # ORIGINAL: g4760.t1 original gene structure, not modified by PASA NODE_3149_length_4189_cov_37.7523 AUGUSTUS gene 283 1876 . + . ID=g4760;Name=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS mRNA 283 1876 . + . ID=g4760.t1;Parent=g4760;Name=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS exon 283 398 . + . ID=g4760.t1.exon1;Parent=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS CDS 283 398 . + 0 ID=cds.g4760.t1;Parent=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS exon 645 836 . + . ID=g4760.t1.exon2;Parent=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS CDS 645 836 . + 1 ID=cds.g4760.t1;Parent=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS exon 1372 1876 . + . ID=g4760.t1.exon3;Parent=g4760.t1 NODE_3149_length_4189_cov_37.7523 AUGUSTUS CDS 1372 1876 . + 1 ID=cds.g4760.t1;Parent=g4760.t1 #PROT g4760.t1 g4760 RHFLLKAKPTDFSTVDLLCFCIDVARGMEHLANCNVIHRDLAARNCMVFAGRTSNPQETGWKLGPTARNVTIRVADFGLSRDSSGSSEYYRAKTRRKLPVKWMSFGIVAWEAFSRGAKPYSGLENHAVRDYLAQDRRLSPPDECPADVYTLMLSCWRKHPETRPSFPQIVLTLRRTMVSACEIGGQSSAGGGSKKLQREATTKDSYVTDTIAVSLGSGSEGALMPKTKGEPMSGAGFVSGAETGKRGDDAVTVREGYTFLQPMYEMDSES* # ORIGINAL: g5731.t1 original gene structure, not modified by PASA NODE_3340_length_3691_cov_39.3197 AUGUSTUS gene 1433 3111 . - . ID=g5731;Name=g5731.t1 NODE_3340_length_3691_cov_39.3197 AUGUSTUS mRNA 1433 3111 . - . ID=g5731.t1;Parent=g5731;Name=g5731.t1 NODE_3340_length_3691_cov_39.3197 AUGUSTUS exon 2746 3111 . - . ID=g5731.t1.exon1;Parent=g5731.t1 NODE_3340_length_3691_cov_39.3197 AUGUSTUS CDS 2746 3111 . - 0 ID=cds.g5731.t1;Parent=g5731.t1 NODE_3340_length_3691_cov_39.3197 AUGUSTUS exon 1433 2551 . - . ID=g5731.t1.exon2;Parent=g5731.t1 NODE_3340_length_3691_cov_39.3197 AUGUSTUS CDS 1433 2551 . - 0 ID=cds.g5731.t1;Parent=g5731.t1 #PROT g5731.t1 g5731 MSSKADYLKKYLSGNDDVKKKKKKKAAAAAGSAGPPAKQQFRIVDDDADDWRRYSPADDAAGAIAARKRLLGLTDAQSVVATDDALDTREDMPLVVGEDDKEKAAKERAKWDRSKWEVMEEESNNNNDKDASPPRRIRHDSVSPVRNVPSQSLADASPPRRRRGDSPEDNSPPRKRTRGDEDPNNGDISPPRRRQRHDSPDMSPPRKGASAADTRDQSPPRRRMRHDSPDLSAQHERSGREGSGRGAADNNDGDLSPPRRRGGSPDQSGDLSPPRRPAGGRPQGDLSPPRRGKPLMSSGHTSGLHTAAEIMEENVRKKEREAEAFRAADPLALGKGAETVYRDKGGKRIDVKFERIRKREEEAKKTEELERQMEWGKGIAQRKAREDKLGDIAHEIHKPFARGRDDEDLEAMLRDREREGDPMAAMMRKKKAGNAPPKPMYRGPPPQPNRFGILPGYRWDGVDRSNGFETRFFARQSDKSAVASESYKWSVEDM* # ORIGINAL: g3927.t1 original gene structure, not modified by PASA NODE_3746_length_2841_cov_45.1005 AUGUSTUS gene 2 2841 . + . ID=g3927;Name=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS mRNA 2 2841 . + . ID=g3927.t1;Parent=g3927;Name=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS exon 2 454 . + . ID=g3927.t1.exon1;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS CDS 2 454 . + 2 ID=cds.g3927.t1;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS exon 768 891 . + . ID=g3927.t1.exon2;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS CDS 768 891 . + 2 ID=cds.g3927.t1;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS exon 1236 1270 . + . ID=g3927.t1.exon3;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS CDS 1236 1270 . + 1 ID=cds.g3927.t1;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS exon 2254 2398 . + . ID=g3927.t1.exon4;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS CDS 2254 2398 . + 2 ID=cds.g3927.t1;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS exon 2673 2841 . + . ID=g3927.t1.exon5;Parent=g3927.t1 NODE_3746_length_2841_cov_45.1005 AUGUSTUS CDS 2673 2841 . + 1 ID=cds.g3927.t1;Parent=g3927.t1 #PROT g3927.t1 g3927 PINRTYITRSDGKTNTTTAFRQFTDDAVEPGKVYWYMITSENDWGKSDNATTNNVTVPIVERENNGPVTDASVSAKESNTGAIVGSVIGSLVFVCASVFGGLFIWRRRHKKKREAMVRSELELIDTVVRRPEIAEIEIPGSCIRFREKIGEGEFGEVYLSDVDFGNGKSTAAVKTFKLSAMASVDDIRSARSGFMSEIDLMRTVVLEYAQHGDLRHFIADNAKTLAVFDFVVFCLDIARGMEQLAKCQIVHRDLAARNCMVVAPRKASKNDEALAMKLSSKANVIVKVADFGLSRDTGASGDYYVAKN # PASA_UPDATE: g5713.t1, single gene model update, valid-1, status:[pasa:asmbl_5820,status:12], valid-1 NODE_3279_length_3844_cov_50.4526 . gene 679 3549 . + . ID=g5713;Name=g5713.t1 NODE_3279_length_3844_cov_50.4526 . mRNA 679 3549 . + . ID=g5713.t1;Parent=g5713;Name=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 679 888 . + . ID=g5713.t1.exon1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 679 888 . + 0 ID=cds.g5713.t1;Parent=g5713.t1;5_prime_partial=true NODE_3279_length_3844_cov_50.4526 . exon 1102 1233 . + . ID=g5713.t1.exon2;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 1102 1233 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 1904 2086 . + . ID=g5713.t1.exon3;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 1904 2086 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 2408 2569 . + . ID=g5713.t1.exon4;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 2408 2569 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 2717 2848 . + . ID=g5713.t1.exon5;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 2717 2848 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 3013 3144 . + . ID=g5713.t1.exon6;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 3013 3144 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . exon 3313 3549 . + . ID=g5713.t1.exon7;Parent=g5713.t1 NODE_3279_length_3844_cov_50.4526 . CDS 3313 3549 . + 0 ID=cds.g5713.t1;Parent=g5713.t1 #PROT g5713.t1 g5713 KYDTEIKVPGLLIIDTPGHESFSNLRTRGSSLCDIAILVVDIMHGLEPQTIESINLLKRFKTPFIVALNKIDRIYDWKATPWMPVQETLSQQKKNVTMEFAERTKAAITAFAEQGLNACLYYDNKDFRKYVSLVPTSAHTGEGIPDLLMLLVQLTQKLMSDRLAFVSEVQCTVLEVKVVSGLGTTIDVILTQGCLREGDTLVLCGTDGPVVTPVKALLMPQPLRELRVKNQYQQYKEIYAAQGVKILAKNLDTVVAGTQLFVARNDDEVLVLKEEARKELKDALMSIKTVDRGVAVQSSTLGSLEALMDFLNTSKIPVSIVNIGPVHKRDIIKASVQLEHDRKYAVMMAFDVKIDKDAREMADDMGIRIFSADIIYHLFDSFTAYIEVCSLRAYV* # ORIGINAL: g13319.t1 original gene structure, not modified by PASA NODE_2246_length_7093_cov_36.4374 AUGUSTUS gene 2306 5918 . + . ID=g13319;Name=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS mRNA 2306 5918 . + . ID=g13319.t1;Parent=g13319;Name=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 2306 2364 . + . ID=g13319.t1.exon1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 2306 2364 . + 0 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 2585 2672 . + . ID=g13319.t1.exon2;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 2585 2672 . + 1 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 2869 2961 . + . ID=g13319.t1.exon3;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 2869 2961 . + 0 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 3324 3381 . + . ID=g13319.t1.exon4;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 3324 3381 . + 0 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 3666 3789 . + . ID=g13319.t1.exon5;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 3666 3789 . + 2 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 4112 4197 . + . ID=g13319.t1.exon6;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 4112 4197 . + 1 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 4573 4663 . + . ID=g13319.t1.exon7;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 4573 4663 . + 2 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 4832 5091 . + . ID=g13319.t1.exon8;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 4832 5091 . + 1 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 5420 5530 . + . ID=g13319.t1.exon9;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 5420 5530 . + 2 ID=cds.g13319.t1;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS exon 5788 5918 . + . ID=g13319.t1.exon10;Parent=g13319.t1 NODE_2246_length_7093_cov_36.4374 AUGUSTUS CDS 5788 5918 . + 2 ID=cds.g13319.t1;Parent=g13319.t1 #PROT g13319.t1 g13319 MSSLQRTIAAAKGVPPPSGGGLRKQRDYTPLPWSNYYEKKDTVTFDNGNKFRAYFRGTEGPLLVLLHGGGHSALSWALLSAHMTSLCKCRILAIDLRWHGKTHTVDKEGDLSGDTMADDVESILLRLFGMDPPPIVLVGHSMGGALAVRIAARKTIRTLIGLIVIDVVEGTAMDALASMQNFLRGRPKSFRSVEHAIEWGHRGGQIRNLESARVSMPAQVERANHGVVPTAWRVGSAHGNRGDVAAGSLVEEDETGNDSDGGAKPAEDPTGFVWRTDLEKTAPFWRGWFQGLSKSFLSVPAAKLLLLAGVDRLDKDLTIAQMQGKFQMHVLPEVGHAIHEDAPDKVAEVLADFLVRNKFTTRVPKE* # PASA_UPDATE: g13318.t1, single gene model update, valid-1, status:[pasa:asmbl_3872,status:12], valid-1 NODE_2246_length_7093_cov_36.4374 . gene 158 1234 . - . ID=g13318;Name=g13318.t1 NODE_2246_length_7093_cov_36.4374 . mRNA 158 1234 . - . ID=g13318.t1;Parent=g13318;Name=g13318.t1 NODE_2246_length_7093_cov_36.4374 . exon 1227 1234 . - . ID=g13318.t1.exon1;Parent=g13318.t1 NODE_2246_length_7093_cov_36.4374 . CDS 1227 1234 . - 0 ID=cds.g13318.t1;Parent=g13318.t1 NODE_2246_length_7093_cov_36.4374 . exon 158 875 . - . ID=g13318.t1.exon2;Parent=g13318.t1 NODE_2246_length_7093_cov_36.4374 . CDS 158 875 . - 1 ID=cds.g13318.t1;Parent=g13318.t1;3_prime_partial=true #PROT g13318.t1 g13318 MLNRTSDLDAYYAFVQQTILAHQNPVTGLLPSSVNFSSRSPDIHHSWIRDSVYGILSVWGLGLAYRKRTDEIGRARAYELEQSVVKLMRGLLFAMMQQADKVEKFKVTQAKEHSLHAKYDTCTGLTVVGDAEWGHLQIDAISLYVLMLANMTASGLTIIFTLDEVAFVQNLVFYIHSAYRTPDYGIWERGDKTNHGLPELNASSIGMAKAALEAISGLDLFGSSGGPSSVVHVLPDEIRRNY # ORIGINAL: g13864.t1 original gene structure, not modified by PASA NODE_1853_length_8903_cov_44.7346 AUGUSTUS gene 1773 4399 . - . ID=g13864;Name=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS mRNA 1773 4399 . - . ID=g13864.t1;Parent=g13864;Name=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 4279 4399 . - . ID=g13864.t1.exon1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 4279 4399 . - 0 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 3998 4138 . - . ID=g13864.t1.exon2;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 3998 4138 . - 2 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 3792 3862 . - . ID=g13864.t1.exon3;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 3792 3862 . - 2 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 3542 3702 . - . ID=g13864.t1.exon4;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 3542 3702 . - 0 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 3261 3356 . - . ID=g13864.t1.exon5;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 3261 3356 . - 1 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 2730 3093 . - . ID=g13864.t1.exon6;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 2730 3093 . - 1 ID=cds.g13864.t1;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS exon 1773 2504 . - . ID=g13864.t1.exon7;Parent=g13864.t1 NODE_1853_length_8903_cov_44.7346 AUGUSTUS CDS 1773 2504 . - 0 ID=cds.g13864.t1;Parent=g13864.t1 #PROT g13864.t1 g13864 MLVGNKLVEAVHAQERVVPSSVKAGRALSDDETEDDERMADGRKLAAKRPRTEHGTPLKRDATGSITPPVVDHGDGMGTPAAVKRLPDAPLLAAIDRQDLDYIRDYLPEDQVNSPIRVSDPRQLFTPLHWAAILRLPRVIQFLIEEKGANMDVVESTMEDTALHRMVKGAEFEDEADKTRCAACIRLLWPLGLRRNRFGDTALLIAAKRLQHAKKARRKMMDLRWLCAEFARAARDLRATDPSVPDVMNATDANHCTAFHYVMSTQSGDVIKEFQSAGVDETVRNRDGLLARDMPAVSAAATGSKKGHGVDGPHSDHMSPSVPSSHIATAVSSTGSSPHHVPMAVVAQHAPLPHTLAHALPHVQAHYGHSNGDNGHASQLQHQHQHHHQHPQHAKPAEDGHGYPAAANAFGFASTGIHPFGHNGEHGGLETLTLAATAAQSGGRIELSSVGLVCNASPVVHSAAPAAVAASGVKQALVSPQGADPHFRTQHGTATPGAVPSYLHELRAHASSPVHAAVTHMPLAMDFETCLAHVSRHYRDAVGLLHLRDEGPCMFVLRRYM* # PASA_UPDATE: g13865.t1, single gene model update, valid-1, status:[pasa:asmbl_2810,status:3], valid-1 NODE_1853_length_8903_cov_44.7346 . gene 5517 8455 . + . ID=g13865;Name=g13865.t1 NODE_1853_length_8903_cov_44.7346 . mRNA 5517 8455 . + . ID=g13865.t1;Parent=g13865;Name=g13865.t1 NODE_1853_length_8903_cov_44.7346 . five_prime_UTR 5517 5694 . + . ID=g13865.t1.utr5p1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 5517 5893 . + . ID=g13865.t1.exon1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 5695 5893 . + 0 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 5980 6104 . + . ID=g13865.t1.exon2;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 5980 6104 . + 2 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 6284 6472 . + . ID=g13865.t1.exon3;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 6284 6472 . + 0 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 6648 6743 . + . ID=g13865.t1.exon4;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 6648 6743 . + 0 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 7003 7049 . + . ID=g13865.t1.exon5;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 7003 7049 . + 0 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . exon 7270 8455 . + . ID=g13865.t1.exon6;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . CDS 7270 7999 . + 1 ID=cds.g13865.t1;Parent=g13865.t1 NODE_1853_length_8903_cov_44.7346 . three_prime_UTR 8000 8455 . + . ID=g13865.t1.utr3p1;Parent=g13865.t1 #PROT g13865.t1 g13865 MAEMKVVAPEAVPQGSNRHRVFRKASYDDHIMVYMAKREFIDHGTHVDPIDAVVLPCADFEKLDSKIFAHLACILRYGNDDWDSLGVPYEKMLYSKTMQVFPPDRPVEKLTSFHRKMMRKLGDRAIPIMMVLPTGLPSSVFLQAVGTEKPKKPERACGISLQLIVNFAEKEEEPANKKKMVRFVFRKLSFIPPPEKPVQPSVSTMNKHLLGSPTKVDLSLDKDTYYPGDTVLISLDVTNFGREIKKVRAQIEQNVELKIDDGPKNWTSRCVIARVKTAEGCPIEKGKSQSMKLTLPVELPTSTKQPSTRLVAVDGWIRGEDLRLAASTRKTHTARDQSIGLAVSYCVTVKCKRLGGNVAVNIPFVLSGAPPKAKPKTIAAPSGSAAAASPASGMPEMKEIPPHERASASADVRRPSQMLHDEPEDSDDDLIDFGGDSDTEDLSKEFAEFVATRAKVEPQLA* # ORIGINAL: g12320.t1 original gene structure, not modified by PASA NODE_2207_length_7261_cov_47.2147 AUGUSTUS gene 1608 7186 . + . ID=g12320;Name=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS mRNA 1608 7186 . + . ID=g12320.t1;Parent=g12320;Name=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 1608 2115 . + . ID=g12320.t1.exon1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 1608 2115 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 2501 2589 . + . ID=g12320.t1.exon2;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 2501 2589 . + 2 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 3524 3742 . + . ID=g12320.t1.exon3;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 3524 3742 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 3922 4782 . + . ID=g12320.t1.exon4;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 3922 4782 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 5054 5173 . + . ID=g12320.t1.exon5;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 5054 5173 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 5358 5517 . + . ID=g12320.t1.exon6;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 5358 5517 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 5724 5878 . + . ID=g12320.t1.exon7;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 5724 5878 . + 2 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 6084 6278 . + . ID=g12320.t1.exon8;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 6084 6278 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 6449 6515 . + . ID=g12320.t1.exon9;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 6449 6515 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 6663 6817 . + . ID=g12320.t1.exon10;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 6663 6817 . + 2 ID=cds.g12320.t1;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS exon 7043 7186 . + . ID=g12320.t1.exon11;Parent=g12320.t1 NODE_2207_length_7261_cov_47.2147 AUGUSTUS CDS 7043 7186 . + 0 ID=cds.g12320.t1;Parent=g12320.t1 #PROT g12320.t1 g12320 MTWPRGVRQPCARRPVMTSPRWTLPLCAAFSVVVFVLSAVTTAEGASTTPPKPFRDLFVLDCTGALHILPQHDRLSAGISLSVVKRVFDRVAALVQNRAKCRCPNIPADDLARRFGLNFGSALKSVTRDPWDVIANKRDGDGWACQQDDSTSFTHTINDIARYFQLGVPDATCSFDRWERNEPCLVQAKLPHFSNTGIQLAVDKCPDSALPFVSVSCAGDMCGEFLRPCSNNNECKTGKCLNVFDSFAPLDGTPAAAQSIRSTYDKVESFLKTMMMWTDSEAAAGKCATNANNTAGMQMLRRILPVFLSTYGLAVNESQSNIPVGLCGVDTLEQPIVGDSDSSASAQGLLARALLNETLWAAAVQRVTANVYYTPATTYLLTTSFPGYTDITVAYSSYLEAIAMQNIDRSWTMSTIRDYFFQTDVTLGSYTKAAKIPADICIDFASRFASLYTLGSYARNSLGVYNSPPVYSAACRKLLTCQYPLRMAYYPSNITDANIASIYNSRLATLSRESAPIRYFLNTFTGGACSNVEQEIARSIVDNTFPDKSMFVKERAFPRNLVTGCGRSGKKYSQTDYTTRFYPGSSEAYTVPVSFGSIQHSGTYPELDIAEAPRFECDADIVFSWNGVLENGESAASSARKSGQSFTRRFMHCNSTDKRIVPVAHLSCASTLTLLPDTGLAVRAYLPQVQQIVSIVGKALRTQASCRNATLANDGIITQYFPWSVQMWSWLMTKVDATMDALGYSSIPTPIRKIADLLGYDRATFSHYIAMPAGCTMQNWVTNKNCSLEFSGLSDLLKADVTVRLVMRACADSPDALPEVYVDCVGTDCRSLLEPYDFTSCVQDTDCGVNSKCQLFSDLDPFDGRDPLAALLWFASVSFVDVSLLCGFLM* # PASA_UPDATE: g7529.t1, single gene model update, valid-1, status:[pasa:asmbl_1814,status:12], valid-1 NODE_1508_length_10829_cov_41.4742 . gene 7103 10352 . + . ID=g7529;Name=g7529.t1 NODE_1508_length_10829_cov_41.4742 . mRNA 7103 10352 . + . ID=g7529.t1;Parent=g7529;Name=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 7103 7180 . + . ID=g7529.t1.exon1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 7103 7180 . + 0 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 7289 7368 . + . ID=g7529.t1.exon2;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 7289 7368 . + 0 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 7562 7656 . + . ID=g7529.t1.exon3;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 7562 7656 . + 1 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 7792 7833 . + . ID=g7529.t1.exon4;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 7792 7833 . + 2 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 8019 8168 . + . ID=g7529.t1.exon5;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 8019 8168 . + 2 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 8421 8469 . + . ID=g7529.t1.exon6;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 8421 8469 . + 2 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 8730 8781 . + . ID=g7529.t1.exon7;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 8730 8781 . + 1 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 8905 8977 . + . ID=g7529.t1.exon8;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 8905 8977 . + 0 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 9207 9327 . + . ID=g7529.t1.exon9;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 9207 9327 . + 2 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 9462 9572 . + . ID=g7529.t1.exon10;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 9462 9572 . + 1 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 9780 9860 . + . ID=g7529.t1.exon11;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 9780 9860 . + 1 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . exon 10042 10352 . + . ID=g7529.t1.exon12;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . CDS 10042 10165 . + 1 ID=cds.g7529.t1;Parent=g7529.t1 NODE_1508_length_10829_cov_41.4742 . three_prime_UTR 10166 10352 . + . ID=g7529.t1.utr3p1;Parent=g7529.t1 #PROT g7529.t1 g7529 MATFEVPKTFKQAVVARIPSGEADIKSADRLREHIEIREVPVPTLHAGQLLVRVEFSPINPSDLGHIAGRYRNRLETPYALGFEGAGTVVAVGGGISTWGKTGKKVAFSVQKGGAWGQFVVVNALEALVLPEGVTTESGCAAFVNPLSVLSMIEEAKAAGATSILHTAAASALGRMLIREGKANGLEIIGVVRREEQAETCRDEGMENVFVTTDPDFSKKLSECLSAKNCTLGYDAIAGESAGTILSLMPPKSTLKVYGGLSGANVSNVGIHDLIFSGKVLTGWYLPAYLETKSMFGQYQLIRRLSAALGSSLSTSVRASFEVEKTAEAVADYVANMSGGKVLIKPNQPLA* # ORIGINAL: g7527.t1 original gene structure, not modified by PASA NODE_1508_length_10829_cov_41.4742 AUGUSTUS gene 415 1778 . - . ID=g7527;Name=g7527.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS mRNA 415 1778 . - . ID=g7527.t1;Parent=g7527;Name=g7527.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS exon 1270 1778 . - . ID=g7527.t1.exon1;Parent=g7527.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS CDS 1270 1778 . - 0 ID=cds.g7527.t1;Parent=g7527.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS exon 415 1122 . - . ID=g7527.t1.exon2;Parent=g7527.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS CDS 415 1122 . - 1 ID=cds.g7527.t1;Parent=g7527.t1 #PROT g7527.t1 g7527 MSEPRRGAGKSSHVDGVRSASAGGAPNREQRRNGPHAQQQWQQRNQQPHHTHPRPHQQAKTGTAGSATLARGLSVVEFADARAREIAALRKAVSGTTGTRRVFQTLPRHMRRRAVSHHVRRLPVRLRAAAKRENVETTAPSAKSKVRKSDSRRARRHPSKLLDAAARLSRKSKWLETHIWHAKRMKMVSQWGYSIALHPCDKNSRAGYAAVSHHSVLQDASFMACIEVTGSPRAIGDVFSRIAADGLSRLPVDAACFVQGSRQGTCVLYSLATDGQRVCIGPATFVWKQASRSSVEKSVNTAFESVNSAMEGVNGDTQQLWLWVHPLMHDAAIDAICASTKCSTDAVAVHSLADSVCLFRLRGPNSHAVAREALAVHPSMMAEHPETMSVWQAMVAMGATSTLPA # ORIGINAL: g7528.t1 original gene structure, not modified by PASA NODE_1508_length_10829_cov_41.4742 AUGUSTUS gene 5346 5957 . + . ID=g7528;Name=g7528.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS mRNA 5346 5957 . + . ID=g7528.t1;Parent=g7528;Name=g7528.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS exon 5346 5957 . + . ID=g7528.t1.exon1;Parent=g7528.t1 NODE_1508_length_10829_cov_41.4742 AUGUSTUS CDS 5346 5957 . + 0 ID=cds.g7528.t1;Parent=g7528.t1 #PROT g7528.t1 g7528 MSPRSINMASGSYPRRPLPNFALFESCSGDDKNNSGESTDSHTAEAVNDGHRSILRAPLRRPKPSSFAPGKSFVRRAVELTRSSSNACVRTQSSLFNKIMTLASIAERPEHADSEQALEMSVPSSASDVPTLAPPTESEIHQDAAAVERHESSLMTLQFGVECEYGFVQLGGATFRVLGALCEDVAEDVYDAMSRGDIVHIDL* # ORIGINAL: g7000.t1 original gene structure, not modified by PASA NODE_2253_length_7068_cov_51.898 AUGUSTUS gene 3193 5206 . + . ID=g7000;Name=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS mRNA 3193 5206 . + . ID=g7000.t1;Parent=g7000;Name=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS exon 3193 3424 . + . ID=g7000.t1.exon1;Parent=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS CDS 3193 3424 . + 0 ID=cds.g7000.t1;Parent=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS exon 3527 3790 . + . ID=g7000.t1.exon2;Parent=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS CDS 3527 3790 . + 2 ID=cds.g7000.t1;Parent=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS exon 3957 5206 . + . ID=g7000.t1.exon3;Parent=g7000.t1 NODE_2253_length_7068_cov_51.898 AUGUSTUS CDS 3957 5206 . + 2 ID=cds.g7000.t1;Parent=g7000.t1 #PROT g7000.t1 g7000 MASAVGAPSAAPVRPQVTGLLGETPGGIAVKNGVPQGPLFNIDKGYMNYTTATRILYFWRQNPYGFLLFDKHPANVPDGFVYFYKASRKKMRSSSNSVYPDSRKITFGGAQKKSGGKGGVDYFEVPGDDSWPVPGPIRGKVTFGPRQLHIRRWGLVGFGPDMPDLIQIRNKIDFFGPDSKSVMRADSSNVRVRASSVDGKDSGSESEAASSPRGGEPDAKRRKISPSPSRDDAQVPHGHVQQQQQQTQQQQQTQQAQQQQLLRTTLAGGRPPMPVMQHPHAAPQSQMRPYADPYAGAHAYPGWPAPSMQGPPPRGMVAPSYPGSMGMGMGMGMGMGPYGAGAARHNAMVGAPHHGGCDCPHCRSWTAAFYHGHRPSQPQGHYMGHYPVNASSPYPGYYPPHMISQQQQQQAQQQAASVMHRPTMPGLPVSMQQSSPAYNYAHVQQQQQDQQHHQQQQDLQPQQQQQQQQQQQQQPQQHEAGFATSARQQSRSPPREPVCDTSRETSVVRSPRSPGIAVPGTRSPSATTVPDASVVASNAVVPVELSSSSADAVPVKESASGDNLEKCAIEWLTGQKPLACS* # PASA_UPDATE: g1576.t1, single gene model update, valid-1, status:[pasa:asmbl_75,status:3], valid-1 NODE_1021_length_14612_cov_41.4726 . gene 1035 4684 . + . ID=g1576;Name=g1576.t1 NODE_1021_length_14612_cov_41.4726 . mRNA 1035 4684 . + . ID=g1576.t1;Parent=g1576;Name=g1576.t1 NODE_1021_length_14612_cov_41.4726 . five_prime_UTR 1035 1189 . + . ID=g1576.t1.utr5p1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 1035 1235 . + . ID=g1576.t1.exon1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 1190 1235 . + 0 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 1384 1618 . + . ID=g1576.t1.exon2;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 1384 1618 . + 2 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 1883 2039 . + . ID=g1576.t1.exon3;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 1883 2039 . + 1 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 2211 2381 . + . ID=g1576.t1.exon4;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 2211 2381 . + 0 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 2695 2859 . + . ID=g1576.t1.exon5;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 2695 2859 . + 0 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 3340 3468 . + . ID=g1576.t1.exon6;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 3340 3468 . + 0 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . exon 3799 4684 . + . ID=g1576.t1.exon7;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . CDS 3799 4290 . + 0 ID=cds.g1576.t1;Parent=g1576.t1 NODE_1021_length_14612_cov_41.4726 . three_prime_UTR 4291 4684 . + . ID=g1576.t1.utr3p1;Parent=g1576.t1 #PROT g1576.t1 g1576 MADNAVIKEGWLHKRGEYIKNWRPRWFVLRANGDLRGYKNGPPQPGDEAINFFEILNSKVALSDKVKKNAFTITFFQLATFVERVFQADSAEERDEWFKALTAVMENTKNRETADAEAKDEAQINKKLSLTDFEILKVLGKGTFGKVVLARLKETGEIFAIKILKKEVIMAKDEVAHTMTENRVLQKTKHPFLTELKYSFQTEDRLCFVMEYVNGGELFFHLSRERIFSEDRARFYAAEILLALKYLHEHGIVYRDLKLENLLIDKDGHIKITDFGLCKEGVQYGSTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGHLPFYNRNHDILFELILKEDIKFPAHLSKEAVGVLQGLLNKDAKKRLGGGKRDGEEIMEHPFFVPVDWSAVMARKVEPPFQPRIQSQTDVSNFDTDFTNENPTLTPSEPSQLRKSAEPVKFENFTFVGGSHLDQKPK* # PASA_UPDATE: g1577.t1, single gene model update, valid-1, status:[pasa:asmbl_73,status:12],[pasa:asmbl_74,status:12],[pasa:asmbl_77,status:12], valid-1 NODE_1021_length_14612_cov_41.4726 . gene 5387 14488 . - . ID=g1577;Name=g1577.t1 NODE_1021_length_14612_cov_41.4726 . mRNA 5387 14488 . - . ID=g1577.t1;Parent=g1577;Name=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 13718 14488 . - . ID=g1577.t1.exon1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 13718 14488 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 12542 13186 . - . ID=g1577.t1.exon2;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 12542 13186 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 12209 12386 . - . ID=g1577.t1.exon3;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 12209 12386 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 11780 11883 . - . ID=g1577.t1.exon4;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 11780 11883 . - 2 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 11436 11520 . - . ID=g1577.t1.exon5;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 11436 11520 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 10196 11021 . - . ID=g1577.t1.exon6;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 10196 11021 . - 2 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 9296 10001 . - . ID=g1577.t1.exon7;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 9296 10001 . - 1 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 8922 9174 . - . ID=g1577.t1.exon8;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 8922 9174 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 8710 8737 . - . ID=g1577.t1.exon9;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 8710 8737 . - 2 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 8494 8542 . - . ID=g1577.t1.exon10;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 8494 8542 . - 1 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 8297 8320 . - . ID=g1577.t1.exon11;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 8297 8320 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 8058 8137 . - . ID=g1577.t1.exon12;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 8058 8137 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 7824 7872 . - . ID=g1577.t1.exon13;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 7824 7872 . - 1 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 6851 6964 . - . ID=g1577.t1.exon14;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 6851 6964 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 6516 6585 . - . ID=g1577.t1.exon15;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 6516 6585 . - 0 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 6115 6237 . - . ID=g1577.t1.exon16;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 6115 6237 . - 2 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . exon 5387 5900 . - . ID=g1577.t1.exon17;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . CDS 5566 5900 . - 2 ID=cds.g1577.t1;Parent=g1577.t1 NODE_1021_length_14612_cov_41.4726 . three_prime_UTR 5387 5565 . - . ID=g1577.t1.utr3p1;Parent=g1577.t1 #PROT g1577.t1 g1577 MGTWVAAQDQDSIGGGFDKSQALVAFLDEFRIWSVARTQDEIKQSMLKELDGTEANLWAYYKFDEGTGDIAYNKVNASRYPFKLASGAAFLASPSQKPLWATSRAPVWGSSALTALINRGKITRVELSPTSAANITLGSISGSSCAGKVDFFSDEAGTSALSDSASMGANAPYAFVRIASGAPTPFGSCFVPYDVTNVYGTAAQRITFSENPVPTVESKTLSFVEDSNTVFPLTGKDNEIIAAVIITSLPKKGALYALTTALVRAYPLLANGSTQLVSGGPMQYVPLPNNYGSPYDTFKYRVMDASGGLSAEATVVINITPADDLPVAGNNPYYLDFIRTELVLSMPTIDPSNGGATFSVAFFAKFPALPSSQQNNYTVFYMPTAATPPSYPYSMRLSSNGRLICAVAGSDAASVDITSLVGDAWFHVAVGFAGTTVVMHLNGAWAANGTATSRPTVTPGIMLGGFVGSVDEFSVYSRILTVSDLAVVRTVKQASLIGALVAAFSFEEGIDLESKCYGTSGACSFKGLLGDGEALKAPIWVLTPPRAAASFSTFPQFETIITDEDVARVVNLRAIDVDTDARALSLVIMNAPSAGKLYQYDDNAPNKRGAAIDPYVYWRNTIEPVTVYPFKAFGVYFPFPCCSSEAEFFDAVNFATRLPCRFCEREDNTLFFSTQFGYVIYGVYSLLFNGGRPYRYNPDNPPSYGYGDFLYAYCPQSSGDPDSNGKRDCADKVPGDISQNLFQWSCPKTTENEYFEIGFKEPLYLQAVTLYENYYPGAVVNIKARMNGTANQWVDVWNGAPQIELYDAHGNYIDEKYRVFEPATCNTAFLVDALHIELATHLVPGWNEIESVALTGTRSLKDGVVTDPKGRVVYVPNKYTNGNDEFSYRVFDCPFQQARSSGTATVRVSVTPVNNAPISTSPSSSAPLSVSVGTPASIVLQGTDFDGNESMYFVLKSNPSLGLLMLNGVVVSTASGRINAGTSTPFVPVNFTLTYESLSATSCGDDSFSYIVTDGTVDSSVIPVRVTVACGVLKSSNSLNLVPIIVPIALAFAILIIVFLAVSVHMSLKRKRDVQRLQRRVIDFKELKVMETLTEGSFGVVRKAEFRGTEVAIKMLKAQAGVSNSETLKEAPLDTERMAAGRIGQAIIATILNRRHDSIQSKFSEIFSSFMNSHTLKTQRDDHGRAELAEFLAEIDIMCNLRHPNVVLFMGCCDKPCYVIIQEFMGGGSVLDAFAAKPNWNLVMRIQMAIDAARGLAYLHSNTPPILHCDLKTPNLLLDRNLVVKVSDFGLARMKYANTKITGQVGSLLWMAPEIMQGEAPTYTWHADVYSYGIMLSEFVTMERPYEVYRETGEITSNEELFMKICMQDFRPNMPASCPLKLSRLTRECWDFRPTNRPPFEIILHRLLEIKEAEASGAAINGAKGDHVKMSRSAAASVANLGQNVSQTMPKPNRLGSRQSIKRDSNPAIRDENLKLEEM* # PASA_UPDATE: g11606.t1, single gene model update, valid-1, status:[pasa:asmbl_9731,status:3], valid-1 NODE_863_length_16571_cov_44.3279 . gene 9744 11024 . - . ID=g11606;Name=g11606.t1 NODE_863_length_16571_cov_44.3279 . mRNA 9744 11024 . - . ID=g11606.t1;Parent=g11606;Name=g11606.t1 NODE_863_length_16571_cov_44.3279 . five_prime_UTR 10974 11024 . - . ID=g11606.t1.utr5p1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . exon 10915 11024 . - . ID=g11606.t1.exon1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . CDS 10915 10973 . - 0 ID=cds.g11606.t1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . exon 10542 10755 . - . ID=g11606.t1.exon2;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . CDS 10542 10755 . - 1 ID=cds.g11606.t1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . exon 9950 10418 . - . ID=g11606.t1.exon3;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . CDS 9950 10418 . - 0 ID=cds.g11606.t1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . exon 9744 9834 . - . ID=g11606.t1.exon4;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . CDS 9764 9834 . - 2 ID=cds.g11606.t1;Parent=g11606.t1 NODE_863_length_16571_cov_44.3279 . three_prime_UTR 9744 9763 . - . ID=g11606.t1.utr3p1;Parent=g11606.t1 #PROT g11606.t1 g11606 MDPHNLEEAKGGFSFDLCHRNELLASKGMKVPKATKTGTTIAGIVYKDGIVLGADTRATEGNIVADKNCRKIHYIAPNIYCCGAGTAADTDQTTDLISSQLELHRLTTGRPSRVVTACRMLKQMLFKYQGQISAALVLGGVDVDGPHLYSIYPHGSVDTLPFVTMGSGSLAAMAVFEAGYRPNLELDEAKLLVRDAIAAGIFNDLGSGSNVDLCVITKDGVDYIRPFEVANAKGERANSYRYARGTTATLTSSVKNLRQVVVTEGDAMEL* # ORIGINAL: g11607.t1 original gene structure, not modified by PASA NODE_863_length_16571_cov_44.3279 AUGUSTUS gene 11519 15123 . - . ID=g11607;Name=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS mRNA 11519 15123 . - . ID=g11607.t1;Parent=g11607;Name=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 14974 15123 . - . ID=g11607.t1.exon1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 14974 15123 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 14687 14836 . - . ID=g11607.t1.exon2;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 14687 14836 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 14366 14495 . - . ID=g11607.t1.exon3;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 14366 14495 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 13503 14225 . - . ID=g11607.t1.exon4;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 13503 14225 . - 2 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 13092 13381 . - . ID=g11607.t1.exon5;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 13092 13381 . - 2 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 12773 12968 . - . ID=g11607.t1.exon6;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 12773 12968 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 12516 12634 . - . ID=g11607.t1.exon7;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 12516 12634 . - 2 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 12241 12386 . - . ID=g11607.t1.exon8;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 12241 12386 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 12006 12153 . - . ID=g11607.t1.exon9;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 12006 12153 . - 1 ID=cds.g11607.t1;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 11519 11881 . - . ID=g11607.t1.exon10;Parent=g11607.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 11519 11881 . - 0 ID=cds.g11607.t1;Parent=g11607.t1 #PROT g11607.t1 g11607 MEVHRCRFFEYVPRAIHCVAFNKSGSLLAVSRADADIEIWNLDSDWHLEKRILGGEGQSIEALSWVGDDRLVSAGLNGRIVEWDLQRLCEKNAADSYGGPAWSLAVCDALSLLAVGCEDGMVRLFSLESGSLSYERSLPDKLEGRILSVAWWPDGSAIVAGATDGTIRKLSLASNRTVFRATLEDGRAGSRAARRANGRMHKTSSSVSEDNDVDVDDDATSGKALVWSIAVLADGTIVSGDSLGHVRFWDGVHGVLIQTIRAHEADVLTVASAPDGRTVFASGVDSVVVQFKYVAQSAKWVEAGKSRAHTHDVRALAVAPAPRSIVVSAGVDTNLVVYPLADFGKAAHRRISPFPHRPLVALASDARRVLGQDARRLNVWQLGEAASVGDGASATDRARLAVRKNPSQLVEIKPKVRSRFGVPCYGCAIDPSWFPVEIESALMHYMQGSLNISCSAISRDGSLVAFSDRKETRLLRIESGKSSDVPPRVKRVRLNDAFQPAIALAFTLDGKRLVSASFSGTVQVLDVESGDVLADFAHHTQLPDGQDEDSWEWRPLCSLALSDDGQWAASGDGHNTVHVFNLDVLKHHATLPRFDSQHTALAFQPTARGNSPVVALALADHRIILYDVERRCLSKWSRDNGKDALPLQWLRRQEKVVGIVFDPADSHRMLLYDSAMFCLVDTRKALPRRDAFLTEQAPGARKHFRAPRAGGRTTKGVNNAQTHTDASDADHGESSDGGDENGVATKDAPIVDEHGRFNFQMLTRFQPLLYLGFAANNTIVTVERPWLAVMEHLPPTLYRVRYGT* # PASA_UPDATE: g11604.t1, single gene model update, valid-1, status:[pasa:asmbl_9730,status:3], valid-1 NODE_863_length_16571_cov_44.3279 . gene 2104 4584 . - . ID=g11604;Name=g11604.t1 NODE_863_length_16571_cov_44.3279 . mRNA 2104 4584 . - . ID=g11604.t1;Parent=g11604;Name=g11604.t1 NODE_863_length_16571_cov_44.3279 . five_prime_UTR 4438 4584 . - . ID=g11604.t1.utr5p1;Parent=g11604.t1 NODE_863_length_16571_cov_44.3279 . exon 3770 4584 . - . ID=g11604.t1.exon1;Parent=g11604.t1 NODE_863_length_16571_cov_44.3279 . CDS 3770 4437 . - 0 ID=cds.g11604.t1;Parent=g11604.t1 NODE_863_length_16571_cov_44.3279 . exon 2104 3670 . - . ID=g11604.t1.exon2;Parent=g11604.t1 NODE_863_length_16571_cov_44.3279 . CDS 2383 3670 . - 1 ID=cds.g11604.t1;Parent=g11604.t1 NODE_863_length_16571_cov_44.3279 . three_prime_UTR 2104 2382 . - . ID=g11604.t1.utr3p1;Parent=g11604.t1 #PROT g11604.t1 g11604 MTDVQDFIHHFTLEKPENVDKQENDQGKKARFFHPFMKPKNSSKMSFRKKLVGSTKKPLHSIDEGLDGAESLARRSSGAASASPDSRAALDEVRRQLLVGQQQMNGLGGMGTGMGMGPHSNYARQGSIATSSAPASASHSRESSDSSDWALHGHGDAHRRQLSDSSVMSTAGYGRVPSHSGSLTAGNHAHSRSHSAEAGDDMQPLPDGWERALTADGHVYFIDHKSMATTWVDPRTKRPTPGTQQVPVAPAAAPSAVADSSALPTPRSSRAWEFLPDPSLSRQPLPPGWEQAITPDGVPYFINHNTRATTWVDPRTNIDMQSLFKRHMDQTDALARRHSHQPQSSEHTLPTPRDIVVEPQHMRSASMPSPRAPFGASQGGAHVTHRSMSHDPPSPTNDALDDLRRQSHELQMRNLRVKKEALRLQQMRLKQQEHQLESVMRTLHRSTSVGSGIPAIPTIPGGLPEHGHAHSMSGLLLPDYNSRAHASFMAMDGSRDDHDGDLVPVDFAMLTLDGHGNNDMSNSINTHMNGSINNCASASSSAPMDEGMHSLDLLNQLGISLGFGMDADGCGGMRETPIVDDGGDMTAYGDAPPGDGSLGGHVTHTRKLSMDSGYGDANPAMDLSGIDELLNLNMHNMEEPAQEFMFDILGN* # PASA_UPDATE: g11605.t1, single gene model update, valid-1, status:[pasa:asmbl_9728,status:12], valid-1 NODE_863_length_16571_cov_44.3279 . gene 8736 9604 . + . ID=g11605;Name=g11605.t1 NODE_863_length_16571_cov_44.3279 . mRNA 8736 9604 . + . ID=g11605.t1;Parent=g11605;Name=g11605.t1 NODE_863_length_16571_cov_44.3279 . five_prime_UTR 8736 8817 . + . ID=g11605.t1.utr5p1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . exon 8736 8823 . + . ID=g11605.t1.exon1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . CDS 8818 8823 . + 0 ID=cds.g11605.t1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . exon 8965 9090 . + . ID=g11605.t1.exon2;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . CDS 8965 9090 . + 0 ID=cds.g11605.t1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . exon 9166 9230 . + . ID=g11605.t1.exon3;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . CDS 9166 9230 . + 0 ID=cds.g11605.t1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . exon 9335 9604 . + . ID=g11605.t1.exon4;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . CDS 9335 9398 . + 1 ID=cds.g11605.t1;Parent=g11605.t1 NODE_863_length_16571_cov_44.3279 . three_prime_UTR 9399 9604 . + . ID=g11605.t1.utr3p1;Parent=g11605.t1 #PROT g11605.t1 g11605 MTSVPINPKPFLNDLINKPVMVKLKWGMEYKGFLTSVDGYMNLQLANTEEYVDGALAGNLGEVLIRCNNVLYIRGAPVDSGSSMQE* # ORIGINAL: g11603.t1 original gene structure, not modified by PASA NODE_863_length_16571_cov_44.3279 AUGUSTUS gene 216 1666 . - . ID=g11603;Name=g11603.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS mRNA 216 1666 . - . ID=g11603.t1;Parent=g11603;Name=g11603.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 757 1666 . - . ID=g11603.t1.exon1;Parent=g11603.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 757 1666 . - 0 ID=cds.g11603.t1;Parent=g11603.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS exon 216 481 . - . ID=g11603.t1.exon2;Parent=g11603.t1 NODE_863_length_16571_cov_44.3279 AUGUSTUS CDS 216 481 . - 2 ID=cds.g11603.t1;Parent=g11603.t1 #PROT g11603.t1 g11603 MATGGVAGVAVASREGYLVKEGGSVKNWKRRWFVLHGNAVLYYADQADAGNGGAPLGTIYLEEIMSAEPTVERPSRAHCFALRGTEYSRRVYYMCADTEDEMREWLKCINAARHGASRRRAAPKREYVSAECFAQAGLRVSGHVHPRVLRSLSHSSGADDKRRDERGWFCARHVPLCAVLAAFGGHGWRADHLYDGVGLVPGNPTPRPATCILFSRGIEGEAGEDDHNARYAHDSDGSDDSDDEVVQAAGTVQAAVEPEPQLLAPMDGFRIEDGTERTALGSAAVLENAELEVCWYRNFFLGRNHSNLIGLMEEEGPFALSIIHEIDRHAHAVGDAAARQPTFQYRVIVWRKTGNERMVIPVKEKQTLTPAEVLEHACPQLSGARGKLRDVE # PASA_UPDATE: g11608.t1, single gene model update, valid-1, status:[pasa:asmbl_9729,status:12], valid-1 NODE_863_length_16571_cov_44.3279 . gene 15542 16328 . + . ID=g11608;Name=g11608.t1 NODE_863_length_16571_cov_44.3279 . mRNA 15542 16328 . + . ID=g11608.t1;Parent=g11608;Name=g11608.t1 NODE_863_length_16571_cov_44.3279 . five_prime_UTR 15542 15582 . + . ID=g11608.t1.utr5p1;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . exon 15542 15585 . + . ID=g11608.t1.exon1;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . CDS 15583 15585 . + 0 ID=cds.g11608.t1;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . exon 15777 15863 . + . ID=g11608.t1.exon2;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . CDS 15777 15863 . + 0 ID=cds.g11608.t1;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . exon 16037 16154 . + . ID=g11608.t1.exon3;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . CDS 16037 16154 . + 0 ID=cds.g11608.t1;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . exon 16318 16328 . + . ID=g11608.t1.exon4;Parent=g11608.t1 NODE_863_length_16571_cov_44.3279 . CDS 16318 16328 . + 2 ID=cds.g11608.t1;Parent=g11608.t1 #PROT g11608.t1 g11608 MAEGDAATQLERLQDQSGVLVLNLDGSIAHSSGELTGDKKVAAAIYTILQDTNKILTSGSRPDGFKRLSVTP* # PASA_UPDATE: g12307.t1, single gene model update, valid-1, status:[pasa:asmbl_5957,status:12],[pasa:asmbl_5958,status:12],[pasa:asmbl_5959,status:12],[pasa:asmbl_5960,status:12], valid-1 NODE_3380_length_3586_cov_39.0068 . gene 990 3470 . - . ID=g12307;Name=g12307.t1 NODE_3380_length_3586_cov_39.0068 . mRNA 990 3470 . - . ID=g12307.t1;Parent=g12307;Name=g12307.t1 NODE_3380_length_3586_cov_39.0068 . exon 3216 3470 . - . ID=g12307.t1.exon1;Parent=g12307.t1 NODE_3380_length_3586_cov_39.0068 . CDS 3216 3470 . - 0 ID=cds.g12307.t1;Parent=g12307.t1;5_prime_partial=true NODE_3380_length_3586_cov_39.0068 . exon 990 3034 . - . ID=g12307.t1.exon2;Parent=g12307.t1 NODE_3380_length_3586_cov_39.0068 . CDS 1007 3034 . - 0 ID=cds.g12307.t1;Parent=g12307.t1 NODE_3380_length_3586_cov_39.0068 . three_prime_UTR 990 1006 . - . ID=g12307.t1.utr3p1;Parent=g12307.t1 #PROT g12307.t1 g12307 LSDLHHHRVVERRPPSHSVSASHAKAAQAAISGRAAGKDSAVSAVGAEGSGDPWGASSAKGAAAKGGSGGVGAVLFSPYVVKTAIVMLFMLVLGVGLYNGATPTETTSLGDAPGLPEPSYSLWRLLSGHANIQLRHRFIEVYAPVAIAMLPSTTRDTLIKVEAGDDGKDSARAAAVEQLAGHIGAVVAFWRNHSALVQTVAIVGVITLVVYSAALRLWPRLIAEAPKVKCAWADPAAPLDEMVLPEPPASVSAGRPEIECLQCDGNRIVSVGIDGVILCHDANTGELRFRLLCGGASIWCMRLSGSLCAVGSADGFVRVFDFDIAAGNALSVNVSHANGTSQRSPPISPGGSDAPPPVVRSHSVSHQVTPPDGQSATGAASVNGSASKPSSPSSILKSAAQSAKQGTSGTGALGTPGTPGSAGTLTAPGDRKPRSSSVSSAQAPQSPHAVPVPPSHVSGELHKPLRFVLKGHEGGVTCLWVMETSTCVHLISGGVDGTLRVWDMATGALLHVLRGHKQGISCLQGSGGRIVSGSNDGTLKIHRVADGHCLYTLYGHPRGITALHIDGETIASGSADGSVRMWHIKDGQCKFVLTGHAASVLSIRSDLDACRFVATASLDETVRVWDVASGRCVHVLPHFCADMVLFPLSATLVCGGQGSLRAFDLAAGVCVRTVQLASSSPSSRLFGLSLRRGARREAAVIGGSDASANVVEAAAPFSLDCSDDEAAVLVNRVVPVGEHIVCDYEGKVILVGPPSPIKHE* # ORIGINAL: g1635.t1 original gene structure, not modified by PASA NODE_2874_length_4872_cov_40.2904 AUGUSTUS gene 681 1886 . - . ID=g1635;Name=g1635.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS mRNA 681 1886 . - . ID=g1635.t1;Parent=g1635;Name=g1635.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 681 1886 . - . ID=g1635.t1.exon1;Parent=g1635.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 681 1886 . - 0 ID=cds.g1635.t1;Parent=g1635.t1 #PROT g1635.t1 g1635 MSAHAADVADMSASSTATDEQHASVDSPSAGSVADSGASQLRGIIRARLSSRIISRQSVASKRGGVANDTNNHEKNGDKRDVLSSLTDGRFNAAFAACGNPLSSREFFLVSSKGCDVQLIHTLRMLSSDYSGTERLVAAIDPLAVPSAGLPQERADAADGALQASEHEANLLRVRGALLRQGNRQVLVDFIAARWGHHVVVGEEAHGGRRYIVVSSRATVSTLSAGTRPAVRLVIDHDTMTVLLFAFDCEAGRGGLTSPGDLHVWCNRVSGGLPLCGGLARDDVSESTDVAVAQELPYRGLRSHRCAWFPAAQQSATAGAQSEVGAASPAALCEARGSASLNLGVCHACKDVPQLIRDERKRKRKASAAGLGVGSIPGVVDGAAVHKARRTSSSQHVFVFD* # ORIGINAL: g1636.t1 original gene structure, not modified by PASA NODE_2874_length_4872_cov_40.2904 AUGUSTUS gene 2714 4299 . + . ID=g1636;Name=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS mRNA 2714 4299 . + . ID=g1636.t1;Parent=g1636;Name=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 2714 2918 . + . ID=g1636.t1.exon1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 2714 2918 . + 0 ID=cds.g1636.t1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 3107 3162 . + . ID=g1636.t1.exon2;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 3107 3162 . + 2 ID=cds.g1636.t1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 3360 3414 . + . ID=g1636.t1.exon3;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 3360 3414 . + 0 ID=cds.g1636.t1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 3697 3765 . + . ID=g1636.t1.exon4;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 3697 3765 . + 2 ID=cds.g1636.t1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 3915 4007 . + . ID=g1636.t1.exon5;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 3915 4007 . + 2 ID=cds.g1636.t1;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS exon 4190 4299 . + . ID=g1636.t1.exon6;Parent=g1636.t1 NODE_2874_length_4872_cov_40.2904 AUGUSTUS CDS 4190 4299 . + 2 ID=cds.g1636.t1;Parent=g1636.t1 #PROT g1636.t1 g1636 MAAVGTEELPEEVVASIRAFEESVSTLESNLKPLLEAPLHEMRSKLEDPVDRAKFELTLAYAMNSLFWMYLNTQGVSPADHPVKQELERIRGYMKKVKDLSETKKFSNSRVNKDAASRFVRSALWDLKAKEAAKKGGALETLDDSADAMQVDDPADEEPVARTPSPAKATKRKEHPQSDSKTNHSNKKKKTRDGK* # ORIGINAL: g1028.t1 original gene structure, not modified by PASA NODE_2527_length_6003_cov_39.5169 AUGUSTUS gene 173 454 . + . ID=g1028;Name=g1028.t1 NODE_2527_length_6003_cov_39.5169 AUGUSTUS mRNA 173 454 . + . ID=g1028.t1;Parent=g1028;Name=g1028.t1 NODE_2527_length_6003_cov_39.5169 AUGUSTUS exon 173 454 . + . ID=g1028.t1.exon1;Parent=g1028.t1 NODE_2527_length_6003_cov_39.5169 AUGUSTUS CDS 173 454 . + 0 ID=cds.g1028.t1;Parent=g1028.t1 #PROT g1028.t1 g1028 NKGEELARAQGGPNMSDVLKDIGKVQLRKSERSPGGTPIRRAPEKREATNPADLIAQALRRKFAHRHSKVDAEASTEDKENFSPHKTIPVTSA* # PASA_UPDATE: g1030.t1, single gene model update, valid-1, status:[pasa:asmbl_4503,status:12],[pasa:asmbl_4505,status:12], valid-1 NODE_2527_length_6003_cov_39.5169 . gene 2880 5658 . - . ID=g1030;Name=g1030.t1 NODE_2527_length_6003_cov_39.5169 . mRNA 2880 5658 . - . ID=g1030.t1;Parent=g1030;Name=g1030.t1 NODE_2527_length_6003_cov_39.5169 . five_prime_UTR 5634 5658 . - . ID=g1030.t1.utr5p1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 5574 5658 . - . ID=g1030.t1.exon1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 5574 5633 . - 0 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 5326 5435 . - . ID=g1030.t1.exon2;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 5326 5435 . - 0 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 5133 5190 . - . ID=g1030.t1.exon3;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 5133 5190 . - 1 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 4863 4976 . - . ID=g1030.t1.exon4;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 4863 4976 . - 0 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 4630 4706 . - . ID=g1030.t1.exon5;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 4630 4706 . - 0 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 4301 4459 . - . ID=g1030.t1.exon6;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 4301 4459 . - 1 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 3914 4050 . - . ID=g1030.t1.exon7;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 3914 4050 . - 1 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 3619 3770 . - . ID=g1030.t1.exon8;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 3619 3770 . - 2 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . exon 2880 3491 . - . ID=g1030.t1.exon9;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . CDS 2964 3491 . - 0 ID=cds.g1030.t1;Parent=g1030.t1 NODE_2527_length_6003_cov_39.5169 . three_prime_UTR 2880 2963 . - . ID=g1030.t1.utr3p1;Parent=g1030.t1 #PROT g1030.t1 g1030 MASAEALLILDDLRTRPGNNNCFDCNAYNPQWVSVSYGIFICLECSGVHRGLGVHLSFVRSVTMDKWNDNQLAKMKAGGNEAARNFLTGRPDYRESMSIQEKYNTQAAALYRDKISAASEGRPWSLNTAIASIQASAPQRRTMSPATNPQGQGGHAGDAGGRATYTTEQLMMSAAGKDDFFARKQLENQSRSENLPPSQGGKYAGFGSTPLKPSGGGSADLLDDAWSSLASGWSSIAWGASKLASTATEKAAELSAAVRENVIKPTSDRMADGTLLTGVTTTVSSLAQKVAVAGETGWHSMQSYLAEGGASGSSSGRTSSQAGHGGSDDDWVKGGWDSGDAWSDSPSSRRQSNQASSGAVGRPKSSGPSSLATMANDDDGDGWVEGGWEPAKPSLAHGTYGAVSTGSVSAAAATVRQSMSTAATGTERGPVPKASGGSKGGSGRWDDGDWGNGDDWEEMLNGKK* # PASA_UPDATE: g1029.t1, single gene model update, valid-1, status:[pasa:asmbl_4504,status:3], valid-1 NODE_2527_length_6003_cov_39.5169 . gene 1059 2826 . + . ID=g1029;Name=g1029.t1 NODE_2527_length_6003_cov_39.5169 . mRNA 1059 2826 . + . ID=g1029.t1;Parent=g1029;Name=g1029.t1 NODE_2527_length_6003_cov_39.5169 . five_prime_UTR 1059 1118 . + . ID=g1029.t1.utr5p1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 1059 1206 . + . ID=g1029.t1.exon1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 1119 1206 . + 0 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 1319 1467 . + . ID=g1029.t1.exon2;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 1319 1467 . + 2 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 1663 1821 . + . ID=g1029.t1.exon3;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 1663 1821 . + 0 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 1944 2107 . + . ID=g1029.t1.exon4;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 1944 2107 . + 0 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 2252 2520 . + . ID=g1029.t1.exon5;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 2252 2520 . + 1 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . exon 2649 2826 . + . ID=g1029.t1.exon6;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . CDS 2649 2707 . + 2 ID=cds.g1029.t1;Parent=g1029.t1 NODE_2527_length_6003_cov_39.5169 . three_prime_UTR 2708 2826 . + . ID=g1029.t1.utr3p1;Parent=g1029.t1 #PROT g1029.t1 g1029 MRALFVLAVLATAALAAGDPVPVVLWHGMGDNCCLPESMGSIQKMIESQVPGVYVKSLRIGDSAAQDSENSFFMDSDAQVANVCAQLAADPKLANGFNALGFSQGGQFLRAYVQRCNKPQMLNLITFGAQHQGVYGMPRCIGANWTLCEVMRSMLNVGAYESYVQHHLVQAQYWHDPKNEKEYLEKSAFLADINNARADKNATYKQNLLTLKNFVMVKFTKDTMVQPRESEWFGFYEPGQDKLTLAMQNTSTYINDDLGLQELNAGNRLHFLEADGDHLQFTDAFFTENIIPYLQ* # ORIGINAL: g13229.t1 original gene structure, not modified by PASA NODE_3969_length_2427_cov_49.5255 AUGUSTUS gene 725 2089 . + . ID=g13229;Name=g13229.t1 NODE_3969_length_2427_cov_49.5255 AUGUSTUS mRNA 725 2089 . + . ID=g13229.t1;Parent=g13229;Name=g13229.t1 NODE_3969_length_2427_cov_49.5255 AUGUSTUS exon 725 2089 . + . ID=g13229.t1.exon1;Parent=g13229.t1 NODE_3969_length_2427_cov_49.5255 AUGUSTUS CDS 725 2089 . + 0 ID=cds.g13229.t1;Parent=g13229.t1 #PROT g13229.t1 g13229 MRIDLNKCSVVQSTIPSLSGLHSVNLSNCRSVNDVSPLSAVHTLILSECRGLINVSSLGGVHTLDLSHCTGIQDASALGGVHTLNLSCCNALSDVSALGSVHTLVLYRCKGIRDVSALGGVHNLSLSHCPNVEDVSSLGGVHTLDLSYCERVSQVSRLGSVHTLNLTGCRYLTDVSRLGGVHNLTLAGCKTLSDVSHLGRVHTLNLSGCQEVVNLSALGAVHTLNLSGCTRVHNVQALSAVHTLDLSRCTFLTDVSALRTIHSLNLVGCAGLTDVTALGLVHTLNLRHCLHVTDISSLGAVHDLNLSYCGALVDVSALHSVHTLDLSGCESLTDVSALSRPYQQGGVHTLRLADCRRLVDISVLGGVHTLDLTRCHCVSDVSHLGSVHTLILSECEGIQDVSALRSVHTLDLSRCRNVRDVSSLAGVRHLDLRFCLNVTDLSALANVPILLRNY* # ORIGINAL: g12272.t1 original gene structure, not modified by PASA NODE_4736_length_1287_cov_75.5223 AUGUSTUS gene 2 1287 . + . ID=g12272;Name=g12272.t1 NODE_4736_length_1287_cov_75.5223 AUGUSTUS mRNA 2 1287 . + . ID=g12272.t1;Parent=g12272;Name=g12272.t1 NODE_4736_length_1287_cov_75.5223 AUGUSTUS exon 2 46 . + . ID=g12272.t1.exon1;Parent=g12272.t1 NODE_4736_length_1287_cov_75.5223 AUGUSTUS CDS 2 46 . + 0 ID=cds.g12272.t1;Parent=g12272.t1 NODE_4736_length_1287_cov_75.5223 AUGUSTUS exon 443 1287 . + . ID=g12272.t1.exon2;Parent=g12272.t1 NODE_4736_length_1287_cov_75.5223 AUGUSTUS CDS 443 1287 . + 0 ID=cds.g12272.t1;Parent=g12272.t1 #PROT g12272.t1 g12272 GGVVYMAGRALADFKRCTVFEVSAVQGGFAYVDTSSRIGDLESCTAVIDGLGTAESFLRVSLPVLSVTGMNFSSGFAARGGFVHATGGAVSLVSLVVNGSTASYNGGALYVAANSASVPAALSRTHFAVADTVMGGCEARSVGGCVYVDESISRVVPRNFTLSHVTIGNSHASAGGGIFVATNNPALLPNLSTVTFFNNNGESGPNRAASVHRLVLAVDLSAPVYPGAILPRMTVVAYDAFSQTAYVPIESRGVYATLLTHVTDAVNTTAGLRLVGGESRNFQKGSALFENMQVRG # PASA_UPDATE: g14184.t1, single gene model update, valid-1, status:[pasa:asmbl_6256,status:3], valid-1 NODE_358_length_26049_cov_41.3683 . gene 10912 14761 . + . ID=g14184;Name=g14184.t1 NODE_358_length_26049_cov_41.3683 . mRNA 10912 14761 . + . ID=g14184.t1;Parent=g14184;Name=g14184.t1 NODE_358_length_26049_cov_41.3683 . five_prime_UTR 10912 10987 . + . ID=g14184.t1.utr5p1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 10912 11225 . + . ID=g14184.t1.exon1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 10988 11225 . + 0 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 11411 11500 . + . ID=g14184.t1.exon2;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 11411 11500 . + 2 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 11845 11948 . + . ID=g14184.t1.exon3;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 11845 11948 . + 2 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 12309 12354 . + . ID=g14184.t1.exon4;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 12309 12354 . + 0 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 12681 12793 . + . ID=g14184.t1.exon5;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 12681 12793 . + 2 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 13042 13371 . + . ID=g14184.t1.exon6;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 13042 13371 . + 0 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 13756 13837 . + . ID=g14184.t1.exon7;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 13756 13837 . + 0 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 14032 14147 . + . ID=g14184.t1.exon8;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 14032 14147 . + 2 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . exon 14449 14761 . + . ID=g14184.t1.exon9;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . CDS 14449 14538 . + 0 ID=cds.g14184.t1;Parent=g14184.t1 NODE_358_length_26049_cov_41.3683 . three_prime_UTR 14539 14761 . + . ID=g14184.t1.utr3p1;Parent=g14184.t1 #PROT g14184.t1 g14184 MSQSPQPPQSTSAVDMPRPASVAPTADVPSQHGLTGNLRDQIYDQRHSDRDSSNSKLMVIYTGGTVGMKLADGALKPEKGFLTQQLKELPDFNSPDMPKFDVHEWDPLLDSSDMSTSDWQRLALEIEQHYYDYDGFVVLHGTDTMAYTACALSFMLEHLGKPVIITGATIPFVEVYNDARRNVIVSMLYASRFDIPEVCIFFNNSLLRGNRSSKFDTFGLGAFESNNFPLLGTLGTEIMLRSDILLPQPRKRFRIHTAFNGNVAVLRLTPGFSDDIVRNLLLPPIQGLVMETYGVGNVPSKKEAFIAVLADAIKRGVVIVVISQCNRGFVDLNKYATGHGLRDIGVVSGGDMTAEAAATKLAYLLGKGLPVSEVKRYLSMNLRGELSPQHIDFARTTFKTQA* # PASA_UPDATE: g14188.t1, single gene model update, valid-1, status:[pasa:asmbl_6257,status:12], valid-1 NODE_358_length_26049_cov_41.3683 . gene 24314 26016 . - . ID=g14188;Name=g14188.t1 NODE_358_length_26049_cov_41.3683 . mRNA 24314 26016 . - . ID=g14188.t1;Parent=g14188;Name=g14188.t1 NODE_358_length_26049_cov_41.3683 . five_prime_UTR 26015 26016 . - . ID=g14188.t1.utr5p1;Parent=g14188.t1 NODE_358_length_26049_cov_41.3683 . exon 25686 26016 . - . ID=g14188.t1.exon1;Parent=g14188.t1 NODE_358_length_26049_cov_41.3683 . CDS 25686 26014 . - 0 ID=cds.g14188.t1;Parent=g14188.t1 NODE_358_length_26049_cov_41.3683 . exon 24314 25411 . - . ID=g14188.t1.exon2;Parent=g14188.t1 NODE_358_length_26049_cov_41.3683 . CDS 24844 25411 . - 1 ID=cds.g14188.t1;Parent=g14188.t1 NODE_358_length_26049_cov_41.3683 . three_prime_UTR 24314 24843 . - . ID=g14188.t1.utr3p1;Parent=g14188.t1 #PROT g14188.t1 g14188 MLMLKLHLRNQQYQIQQHELLQKAGVAAIANSPANLFKQIGPLEEKLYVRCIPALKRLGATGRLPALDTDGFLNVPSSGLTALHVAAEFGWIRFVETLLAAGADPNQLDGLQNSALDWGFMSDQDKICRLLTSRGGQYNTFRTKMEELQTGLEHIDIGSPAVSARPGSAGSPAAPPVPMAIDDLAQQETFVNEAMNLESDVLDPSAFNMDVPVFASGVSCVPGVVVPLPNYPHDSSAASGHMASHSPGGIFDALGESGNLADNEADDSHLGRAGDDGSEGPRKRASMQSLMSNIKRRF* # ORIGINAL: g14186.t1 original gene structure, not modified by PASA NODE_358_length_26049_cov_41.3683 AUGUSTUS gene 18135 19202 . - . ID=g14186;Name=g14186.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS mRNA 18135 19202 . - . ID=g14186.t1;Parent=g14186;Name=g14186.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 18135 19202 . - . ID=g14186.t1.exon1;Parent=g14186.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 18135 19202 . - 0 ID=cds.g14186.t1;Parent=g14186.t1 #PROT g14186.t1 g14186 MTALRLSVLLLLSCALARADALTGRDVTGTGGDHCLAGSAATSPPGKCSDGNRPLSFALAGSALLVPYYFGVFESLIEVGAVDASTTFGGISGGAVTSMLICAGHSPQRINTSFSDMFAWCRNNIEWCGSHLSGHAKKRVYDPLLTAETVNGCVDGRVTVGLTRLNPLSDSFQDATAMSVNRFNGAADIVEALLASSFLSCFVAPHTYTTFRGEPVIDGAYKGDFVDICPPNTECIRISAFVVGDRVTEGNANPDWHCFPRASTTGELHNWPQFYAEEWNLPTSCDYDHNEFQTPTNPHIYPGKYTTIPYSRAQWHGLAMCLGSQEDVNNMYKAGRADALAWWSERLASQHRDEL* # ORIGINAL: g14183.t1 original gene structure, not modified by PASA NODE_358_length_26049_cov_41.3683 AUGUSTUS gene 7212 10169 . - . ID=g14183;Name=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS mRNA 7212 10169 . - . ID=g14183.t1;Parent=g14183;Name=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 9100 10169 . - . ID=g14183.t1.exon1;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 9100 10169 . - 0 ID=cds.g14183.t1;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 8565 8744 . - . ID=g14183.t1.exon2;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 8565 8744 . - 1 ID=cds.g14183.t1;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 8051 8174 . - . ID=g14183.t1.exon3;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 8051 8174 . - 1 ID=cds.g14183.t1;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 7494 7706 . - . ID=g14183.t1.exon4;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 7494 7706 . - 0 ID=cds.g14183.t1;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 7212 7304 . - . ID=g14183.t1.exon5;Parent=g14183.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 7212 7304 . - 0 ID=cds.g14183.t1;Parent=g14183.t1 #PROT g14183.t1 g14183 MPASPRPPHTYASVVSTAYSPLKLSSLQEVASTPRARRSRWRHSQAASDSHVPTIQMPVFLQPTYKAVDPDLPSNEFEDAFFAVLPRKSSVVSVACSKTAVLGLLLPNAVRPEPNTSKFTLLDSEIASRIRALIISAPHQSIAIAKALSRYTAVEGWESSLWMVLVLTGFPRVEDERQTDALRKLASMMIPNDRRLIDTVIQGLTTPNIIQLLLKAERLTREYDRREFWPLADGCMDELAVRASIGNASAKLLGELFTMLAQSRTYHNLLLETLCVVAKERYVMWTKARPAPLPATRRNHTKRTQSVDPQKGAPQSPLERQKLAANDFLAMTPSVAAGIIACLATLGYGDVRVFLECVMNDKSFPLDELDNHDLVELAWGLCAFEAYTPLLKRAVEMIGSRADSLIAYEKKIYLHARIALIYMSVKMGTSWRIQIPPSLAEDIALNRRPPTVSVFHKEVMRFFSDMKLPIQHEMPLPDGGLSLDIAIAKIRLALEVDGPNHFLRNTHVLDGLSKMKSRLVEKSGWTVQRIPYFEWNELTTPEARADYILKEKLRAVTMS* # ORIGINAL: g14185.t1 original gene structure, not modified by PASA NODE_358_length_26049_cov_41.3683 AUGUSTUS gene 15235 17286 . - . ID=g14185;Name=g14185.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS mRNA 15235 17286 . - . ID=g14185.t1;Parent=g14185;Name=g14185.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 15235 17286 . - . ID=g14185.t1.exon1;Parent=g14185.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 15235 17286 . - 0 ID=cds.g14185.t1;Parent=g14185.t1 #PROT g14185.t1 g14185 MAIPDEATWIADASARCGGVSSIIRDIVRRMRVLFVHSHSFDSNKLSRPCGIFITGPSGVGKTTIATSVASASTLPTFLVNGADVFKRDEGDSEAVISLVFKRARACAPSIIIIDGVESVAPSSDDAGAAERRLASHLCAEVDTITHASLSSSASSNQHCGPVCVIAIAANASLVAARARSTGRLDYVVAMGMPTASQRLEILSLLSKPLCGLPLCPNDETLAMVADHMHGYTPADIRSVFGTAVTRAASRQSTGGAVGVDDPSTGSSHTLSPLSWADFATLLEQGVPSALLGQTAPKGCLRVRLDDIAGVEDIMSDLRLSVVFPLKHPRAASKLGVRAPRGVLLHGPPGTGKTAIAMALAAETGLGICVLNGSEARSKVVGESERTLSRFMAQARLASPCVVIMDDVDAIAPRRNTLETAGEQAGDRLLSSLLTEMDGLWESAGSGAGSNPSIVFVATTSRFDSLDPAVLRPGRLEKHVSVPMPDENARVRIFERFLSKMPATDTVLETIPAVARDTPGYTGADIAAVCNEAGMCAIRAGSATVELDHVNASLGTIIAQSAEVDSDGDSSGTDDAVESSSSSLRALSRELRRLRMQSVGKNRWSDDRKKQQQQQQQQSRRRSAGAGSRGHLPVPVAVDADGGGLLASGGFAVAASETPADARSTSGFNFVYVPSSDVSFPCD* # ORIGINAL: g14187.t1 original gene structure, not modified by PASA NODE_358_length_26049_cov_41.3683 AUGUSTUS gene 19633 23216 . + . ID=g14187;Name=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS mRNA 19633 23216 . + . ID=g14187.t1;Parent=g14187;Name=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 19633 19872 . + . ID=g14187.t1.exon1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 19633 19872 . + 0 ID=cds.g14187.t1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 20043 20119 . + . ID=g14187.t1.exon2;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 20043 20119 . + 0 ID=cds.g14187.t1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 20469 20654 . + . ID=g14187.t1.exon3;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 20469 20654 . + 1 ID=cds.g14187.t1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 20961 21455 . + . ID=g14187.t1.exon4;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 20961 21455 . + 1 ID=cds.g14187.t1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 21790 21954 . + . ID=g14187.t1.exon5;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 21790 21954 . + 1 ID=cds.g14187.t1;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 22319 23216 . + . ID=g14187.t1.exon6;Parent=g14187.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 22319 23216 . + 1 ID=cds.g14187.t1;Parent=g14187.t1 #PROT g14187.t1 g14187 MDPPSPASTDVDYGPFELIDLTGDGGEVVVITRTTKHMESVSTDVCSEEPRYDEEPDADLSSTTFHCHIPEQHCAPDHDQIGKFGFTHPEYLLAVCDGCLAQYHDGHHLMELGDWRRCRVCGQKADPVDKACVWACSRRDCHYVYHKVCCAESDSPSDDDKAWKCFKCRDNHWFYRPGLVSDDDGESEISNDEDDDKDEDDYSSLGGGDDGGGEASHDHEDGEADVGVRVSAACTPINVRDAGSNSNRHGNYKRKGKNPEREGGIKRMRRDRGVTTGKDEDAYADGDDDDDGAEVGCTGRVAVAQSSGLTPTAQAAFRTHFAMPNVKIQNAAKVLEERQWDSLKHAYYNPISPLLPRNKQRGIRVLSLFDGIGAGYVALLTVGIKVDWYLAVEIDQNAIKVSQRWFRGTGVFEAFHDVTVMVRLEEIIKPEYARQIDIVIGGPPCSEFTSNNPRAAGKNGMKTPTGSLPFYFNEVLTEVRRHNPNVLFMVENVSSMHLHVKMRMSALLKVIPTDFNASVVSAASRQRLYWTNFPWSLPPKRPVSRDDQRRVPIFQDCLDPSTSAEYVAVSKIANCVLTSRAPPEVNAKDVDPDRLKRLSKFNVLCSRRGDGLQLPTPTELERLMGFPAGYTEYGIDRDGRVERMNEKTRRVLLGMSYSIPAVAHIFFHLRDYFATFATDDEVRVAY* # ORIGINAL: g14182.t1 original gene structure, not modified by PASA NODE_358_length_26049_cov_41.3683 AUGUSTUS gene 134 6461 . - . ID=g14182;Name=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS mRNA 134 6461 . - . ID=g14182.t1;Parent=g14182;Name=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 6264 6461 . - . ID=g14182.t1.exon1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 6264 6461 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 4964 6153 . - . ID=g14182.t1.exon2;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 4964 6153 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 4583 4772 . - . ID=g14182.t1.exon3;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 4583 4772 . - 1 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 4052 4421 . - . ID=g14182.t1.exon4;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 4052 4421 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 3630 3829 . - . ID=g14182.t1.exon5;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 3630 3829 . - 2 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 3238 3465 . - . ID=g14182.t1.exon6;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 3238 3465 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 1827 3054 . - . ID=g14182.t1.exon7;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 1827 3054 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 1445 1641 . - . ID=g14182.t1.exon8;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 1445 1641 . - 2 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 1089 1217 . - . ID=g14182.t1.exon9;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 1089 1217 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 663 869 . - . ID=g14182.t1.exon10;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 663 869 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS exon 134 376 . - . ID=g14182.t1.exon11;Parent=g14182.t1 NODE_358_length_26049_cov_41.3683 AUGUSTUS CDS 134 376 . - 0 ID=cds.g14182.t1;Parent=g14182.t1 #PROT g14182.t1 g14182 MADYVHRLDTLIGLVGSKDMKEKIQGCTELLTAIEHGDLPVKVFDDEAMGRLVDSLQAVSKTSNFKASQLALDSLAAVCTRVGDAFNHHHLPITPAIIERLGDAKQPVRDAAQSLLQAMMDSCGSVQSVMDRIKPAFSHKNPKVREGALVCICRTLGREDGCGDLKVSPLLTPVCTLLEDSQQPVREQAIQTLVELYRSVGERIRDDITKRGLQKSRLAIVLERLDAAAAEGPIGDGRASPVQQQSAPRTKSAPAPAKASAPPARQNSLPGPSQAPTSAAPPLDRQASIASNGSALDSEFVDAADECAAVRVHSDKELDGELMRIGSTIADQNVEWERRIKSTKRLRSLVNGGAANMDCFVPLLKQHAGATLAAMAVDLRSAVQRDACVTIAHLARVLESRLEPMCESLAPALLKMTCSTVKIMAENAHCCLRQLAANTPSQRSLKMFCDSLTDSKSVMLRTRAAEYLTIALRDWDISQLERSGAMLETVIRKGLGDADGGVRTQSRRAYWAFFAIMQDRATAVAATLDASAEKLLIEERKKMSTDGDKASHVRAPSATRPARTGAVTSAPPAMQRHASQPALSQQQRAALDAPTAPPKKAGVASGAVRLNVQSGAQSQPNLTAVVTPAKEDVQRRTAMLRPMATAGLAGGAKRAGPSTETPPPGILSLLHRNPRLNSAGSTGREANVQSAEASADESDSDARSVDRQSPTRMLSESGQGPSIATMLQRLASDQWADRMQALGSLRARIARASNSPSVAEIESICHSLARRVDIEKHPKASAFCTVFSGAVVVLASALDALLDLIQSFREALLPIAVSGERPWMDFMLAALFLRQSQEPGAEVDGRIERIVDTFRSTFPYSDQLQSCFRLLADADSNPRTRDIVARTFLLDHALAVLPKAPAAALSAESSLASEGVARIVAMTGDPRSKDFRSMAEDVLVAMYRVNPPAFNTIVRSLPSAEAAGAADVLSAHLPTWQLGNGSAAASGTQSVHDNADDDDHDDDAMNDDVSDHHRRMDARPSSSLSSRGVTSHVADSESDGDDAEPASPPRDVESTPRVAKYSPSHYARPPSATSETAARGTPSSAHRASSRALSGRTPSRAYEMEAGSRPVSSSSSTASRTLFGADAAAAQGMPVGVSSSRSASEMGDHSSMASPALDFYAPAPHAPSSASKEQPRSALSSLPAMVSRRIGQQTQGYPTGGGLSPATVSVPSLLARLAAPEENSTPKEREDALNKLAKASRENDERTWEKHFAAAFAIALDHLRAIEGGVRTAALRLLREMFRNQCDAMADKISVVLPRLLEMHSDREREVLRWAEEVTVSASEVVSPMECIAVINPTIASSDGAPMLAAIKLLTRLLAQLAPESLEEALPLVLPGLFRGYRHSAAEMRKAAVFCLVEMHLVLGDALLPSLAELSTSQMRLLTIYINRAKTKAGADGTVPEDAVGGSGPQYAPSSSIYV* # PASA_UPDATE: g11239.t1, single gene model update, valid-1, status:[pasa:asmbl_6075,status:12], valid-1 NODE_3443_length_3455_cov_43.6663 . gene 2504 3380 . + . ID=g11239;Name=g11239.t1 NODE_3443_length_3455_cov_43.6663 . mRNA 2504 3380 . + . ID=g11239.t1;Parent=g11239;Name=g11239.t1 NODE_3443_length_3455_cov_43.6663 . five_prime_UTR 2504 2571 . + . ID=g11239.t1.utr5p1;Parent=g11239.t1 NODE_3443_length_3455_cov_43.6663 . exon 2504 2693 . + . ID=g11239.t1.exon1;Parent=g11239.t1 NODE_3443_length_3455_cov_43.6663 . CDS 2572 2693 . + 0 ID=cds.g11239.t1;Parent=g11239.t1 NODE_3443_length_3455_cov_43.6663 . exon 3203 3380 . + . ID=g11239.t1.exon2;Parent=g11239.t1 NODE_3443_length_3455_cov_43.6663 . CDS 3203 3380 . + 1 ID=cds.g11239.t1;Parent=g11239.t1;3_prime_partial=true #PROT g11239.t1 g11239 MAARQVARKVFDWAGVSSRIPAELRPTVGDLRTRYDQLWGRLDSLPKTEPIDWEYYSVALAPAKKTVDEFRKQVEAIQLPSFGDVQAKNADEIAKAEKEN # ORIGINAL: g11238.t1 original gene structure, not modified by PASA NODE_3443_length_3455_cov_43.6663 AUGUSTUS gene 165 1724 . - . ID=g11238;Name=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS mRNA 165 1724 . - . ID=g11238.t1;Parent=g11238;Name=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS exon 1551 1724 . - . ID=g11238.t1.exon1;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS CDS 1551 1724 . - 0 ID=cds.g11238.t1;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS exon 1318 1384 . - . ID=g11238.t1.exon2;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS CDS 1318 1384 . - 0 ID=cds.g11238.t1;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS exon 1019 1184 . - . ID=g11238.t1.exon3;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS CDS 1019 1184 . - 2 ID=cds.g11238.t1;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS exon 576 708 . - . ID=g11238.t1.exon4;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS CDS 576 708 . - 1 ID=cds.g11238.t1;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS exon 165 282 . - . ID=g11238.t1.exon5;Parent=g11238.t1 NODE_3443_length_3455_cov_43.6663 AUGUSTUS CDS 165 282 . - 0 ID=cds.g11238.t1;Parent=g11238.t1 #PROT g11238.t1 g11238 MVEDVLFADSGAQPLTKVVVGGVPEHFNSPFKIGKERGIFAKYGVDLDFVECFGGTGEMTKKLKEGSLDLAVALTEGLIASIAKDPAPFRIVSSYTASPLTWAISVAPDSALASVDDLEGAPIGISRIGSGSHIMTFVLAKQRGWTKPNSFVVLDNFKGLREGTRSDRVKAFLWEHFTTKPFFDTKEVRRLDEITTPWPAFMVAARTEADQGVVRRVLR # PASA_UPDATE: g5462.t1, single gene model update, valid-1, status:[pasa:asmbl_7274,status:12], valid-1 NODE_4391_length_1678_cov_30.0742 . gene 226 1547 . + . ID=g5462;Name=g5462.t1 NODE_4391_length_1678_cov_30.0742 . mRNA 226 1547 . + . ID=g5462.t1;Parent=g5462;Name=g5462.t1 NODE_4391_length_1678_cov_30.0742 . exon 226 363 . + . ID=g5462.t1.exon1;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . CDS 226 363 . + 0 ID=cds.g5462.t1;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . exon 744 855 . + . ID=g5462.t1.exon2;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . CDS 744 855 . + 0 ID=cds.g5462.t1;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . exon 1121 1254 . + . ID=g5462.t1.exon3;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . CDS 1121 1254 . + 2 ID=cds.g5462.t1;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . exon 1434 1547 . + . ID=g5462.t1.exon4;Parent=g5462.t1 NODE_4391_length_1678_cov_30.0742 . CDS 1434 1547 . + 0 ID=cds.g5462.t1;Parent=g5462.t1;3_prime_partial=true #PROT g5462.t1 g5462 MPSVAGGFSFVFLAQDSDGGGKYALKRLLAIDEQRYRAFKTEVDVFRRLGSHENIVGFLGSEDIRSGSDEGVSEVRILMEYCPGGHVGEALYGTSPSKWTILKHFTSAARAVALMHSQQPPIIHRDIKAENLLLSARGVAKLCDFGSSTTTVMRPETLKEITAAEE # PASA_UPDATE: g8180.t1, single gene model update, valid-1, status:[pasa:asmbl_2563,status:12], valid-1 NODE_1768_length_9318_cov_41.1055 . gene 141 4362 . - . ID=g8180;Name=g8180.t1 NODE_1768_length_9318_cov_41.1055 . mRNA 141 4362 . - . ID=g8180.t1;Parent=g8180;Name=g8180.t1 NODE_1768_length_9318_cov_41.1055 . five_prime_UTR 4130 4362 . - . ID=g8180.t1.utr5p1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 4084 4362 . - . ID=g8180.t1.exon1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 4084 4129 . - 0 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 3510 3602 . - . ID=g8180.t1.exon2;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 3510 3602 . - 2 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 2989 3086 . - . ID=g8180.t1.exon3;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 2989 3086 . - 2 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 2078 2185 . - . ID=g8180.t1.exon4;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 2078 2185 . - 0 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 1712 1814 . - . ID=g8180.t1.exon5;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 1712 1814 . - 0 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 1287 1433 . - . ID=g8180.t1.exon6;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 1287 1433 . - 2 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 793 943 . - . ID=g8180.t1.exon7;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 793 943 . - 2 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 507 609 . - . ID=g8180.t1.exon8;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 507 609 . - 1 ID=cds.g8180.t1;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . exon 141 294 . - . ID=g8180.t1.exon9;Parent=g8180.t1 NODE_1768_length_9318_cov_41.1055 . CDS 141 294 . - 0 ID=cds.g8180.t1;Parent=g8180.t1;3_prime_partial=true #PROT g8180.t1 g8180 MARPPPHPREVMTDLANGSLPPGFPSGRRGSKVTALGGISAGGNEKPAFNGRNSFSGGPVDMVPSSPSPRRGSVHTVNLNDPEAAPFPPLPPGDHDGPTFPSRRLLNRRPSSGQPIIERRGSMSNKSSGRTSPSEERLPDDESQPYANGASSIDSENVWGRRIDDMEKRHAHEMASMMGQIDTLKMKVLEKESALSQAGTEIETLRSSQDKLSRQIAQSRERQQTVEKQIDDTMKALSLREKTIKEMTRMRDNVLCTPAPTGQVALVFTDVESSTEQWEMFPQVMSLAIRLHNRAMRELIDEFKGYEVKTEGDAFMVAFGKPINAVKFCLKAQE # PASA_UPDATE: g8181.t1, single gene model update, valid-1, status:[pasa:asmbl_2566,status:12], valid-1 NODE_1768_length_9318_cov_41.1055 . gene 5222 9318 . - . ID=g8181;Name=g8181.t1 NODE_1768_length_9318_cov_41.1055 . mRNA 5222 9318 . - . ID=g8181.t1;Parent=g8181;Name=g8181.t1 NODE_1768_length_9318_cov_41.1055 . five_prime_UTR 9318 9318 . - . ID=g8181.t1.utr5p1;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . exon 8571 9318 . - . ID=g8181.t1.exon1;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . CDS 8571 9317 . - 0 ID=cds.g8181.t1;Parent=g8181.t1;5_prime_partial=true NODE_1768_length_9318_cov_41.1055 . exon 7106 8364 . - . ID=g8181.t1.exon2;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . CDS 7106 8364 . - 0 ID=cds.g8181.t1;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . exon 6756 6975 . - . ID=g8181.t1.exon3;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . CDS 6756 6975 . - 1 ID=cds.g8181.t1;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . exon 5222 6514 . - . ID=g8181.t1.exon4;Parent=g8181.t1 NODE_1768_length_9318_cov_41.1055 . CDS 5222 6514 . - 0 ID=cds.g8181.t1;Parent=g8181.t1 #PROT g8181.t1 g8181 TSQEYFASGASESKDVVAYMTFIQSVQAARSAESKCLQAQTAFWATLLQPQPDSTRLREISSVISRHITIGQAAFHTLLRVSPDSPQVCRMYSNWLGTIMYDQDKKLIYQNRATVLESSRDEDKQVVSLGGALAIFDDGVIRADDSKHAKTINGGTKALKSSLNVDGMRDGVSAVLGLVSDEDHFGFIASANPAAARLFGYTRHDLLGQQVGNLTAMPFAGDIERAALAYISSGDLAIRGTRNVFFRHKNGYIFPGRLTIKEITGTGVLPTFVAIAEPMDSKDAFVLVDPATGVVTGYTANCLVVFGIRIEELMDKTVSIADWIPDYAGMRTAMASYGGAPFSISDDVDSAYPAKATIWESQMGEVEDRVLVIRIRRDEAMDEQPPLLLREKPALERRHSTGINGSLSESFDSTNARVQQHPRSSLRNSKLFSRQNTRDEMANASRESSLPSLPVWEDPAKQQRKHTPVKTANYSKDARMPVVDDRTISFEHGGAAETKGENADEQSAHEHKPHEIIELEEIRPRNGSVVLEGLDALPSAGDGQNSDMDESRSSSSRQSSRGRRVNALRRTLVNANNGGLARSLQAFRVVVVLTLAAILSVAIASYVVEKQQVSEFQDAFASLNAAAEIRFQAVSAGYITRRLSFANTGLRPSTLLAPSIAQLSSIANSLEDGYKAITARVPKMSAQHRLLFETPSVDFISDFTAAGQTIMRTTLGEALKTTISRVRQITRTNLTGHIAFDPLFVVPIVNGLETGSLSRSFNASSAFTLKEVDDQIRSMREVYVALAVSGLTVVFALTAFVILPTVIYVERASEHTLRVFENVPRETVRKMRRKCTKKLKELQTEDENSDSNSDDDSERHTHRRGSNAVAVSKSKSAQNQPVRMRFRRAPKYVAIMGLKISTFLILGVLFFSLSYYFGFLRIENSLRDGAVRVNYAGYIRTTTRSLTWLGYEYNVNTAGQDLSAQVDNATADLSEIVRGLEIGSAVFRIPPRSNVESAHAVLLDDNACIAAQLTHKDYSDCMTAGDGIFANGLNQAMLWYIRRMGELKVVPPVNTTGEYIFTAANNPQIIQTQDYEERFVQPALALSASYYTDSTEKIIRESKNIVLALLVMFVVLSIVAYFAVYARLIVALDTEMKRTRSMMLMLPEEALMQMEAYVSKLAAETTVHTSRV* # ORIGINAL: g7900.t1 original gene structure, not modified by PASA NODE_127_length_37076_cov_40.3831 AUGUSTUS gene 279 2169 . - . ID=g7900;Name=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS mRNA 279 2169 . - . ID=g7900.t1;Parent=g7900;Name=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 2116 2169 . - . ID=g7900.t1.exon1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 2116 2169 . - 0 ID=cds.g7900.t1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 1596 1751 . - . ID=g7900.t1.exon2;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 1596 1751 . - 0 ID=cds.g7900.t1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 1200 1317 . - . ID=g7900.t1.exon3;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 1200 1317 . - 0 ID=cds.g7900.t1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 902 985 . - . ID=g7900.t1.exon4;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 902 985 . - 2 ID=cds.g7900.t1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 618 712 . - . ID=g7900.t1.exon5;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 618 712 . - 2 ID=cds.g7900.t1;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 279 401 . - . ID=g7900.t1.exon6;Parent=g7900.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 279 401 . - 0 ID=cds.g7900.t1;Parent=g7900.t1 #PROT g7900.t1 g7900 MVRPLPKTLSDYAISWSPVDGEDSVLVSAVTVALSSIASSHTVSIIPVSPWGAFIPALNALVLHAAKRCKTSSRPAAVAFASPEVELGGGIGTLHNGNSLDQLIRHLSNDTLVVGAALPGHDFTSGARDLDGCTCPWNTLAVWRADRLALTGFTLVAEGILPNVSGGIEEVTTVALHQRLWPSLSVAKLVGINGIEWDTKKWANFKCRG* # PASA_UPDATE: g7905.t1, single gene model update, valid-1, status:[pasa:asmbl_1065,status:12], valid-1 NODE_127_length_37076_cov_40.3831 . gene 19829 21966 . - . ID=g7905;Name=g7905.t1 NODE_127_length_37076_cov_40.3831 . mRNA 19829 21966 . - . ID=g7905.t1;Parent=g7905;Name=g7905.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 21749 21966 . - . ID=g7905.t1.utr5p1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . exon 21477 21966 . - . ID=g7905.t1.exon1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . CDS 21477 21748 . - 0 ID=cds.g7905.t1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . exon 21149 21317 . - . ID=g7905.t1.exon2;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . CDS 21149 21317 . - 1 ID=cds.g7905.t1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . exon 20913 20988 . - . ID=g7905.t1.exon3;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . CDS 20913 20988 . - 0 ID=cds.g7905.t1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . exon 20492 20659 . - . ID=g7905.t1.exon4;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . CDS 20492 20659 . - 2 ID=cds.g7905.t1;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . exon 19829 20271 . - . ID=g7905.t1.exon5;Parent=g7905.t1 NODE_127_length_37076_cov_40.3831 . CDS 19829 20271 . - 2 ID=cds.g7905.t1;Parent=g7905.t1 #PROT g7905.t1 g7905 MSNLRPLKHLWWREDFYARYMLLVKNGTGVSSASSAGQQRPSSPPMTLKSSTHTGGADTANSMVGYVATANLVSGSLAAKKYSKTLSASWGDIQSASVLGSYVVNADPPFAVYEIEVVRGEEKWIITRRYSDFDELHEQLLRNFSSRIIDSLRLPSKRWYKLNKFDPDFLLEPYAYFTSLALFLLFDVTLMQAVLSHPVMRKCHYLRLFLSDEWRDVLSGTPENLRIDEYMKINPHVPAYGCKKGRKCKTCRGAYAPRNTLDAPLPSPTSASPHRNSGGWAAPAPKKLPPLLNKRVVALREEYDYERKWEPMGTPTSSTDNWFKKSTWKAGRPSFYDDVYPSRTQMAQKRLFLQDYHRQRFGPMWRPTNVVVNPN* # PASA_UPDATE: g7906.t1, single gene model update, valid-1, status:[pasa:asmbl_1055,status:3], valid-1 NODE_127_length_37076_cov_40.3831 . gene 22690 24908 . + . ID=g7906;Name=g7906.t1 NODE_127_length_37076_cov_40.3831 . mRNA 22690 24908 . + . ID=g7906.t1;Parent=g7906;Name=g7906.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 22690 22737 . + . ID=g7906.t1.utr5p1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . exon 22690 22912 . + . ID=g7906.t1.exon1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . CDS 22738 22912 . + 0 ID=cds.g7906.t1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . exon 23044 23132 . + . ID=g7906.t1.exon2;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . CDS 23044 23132 . + 2 ID=cds.g7906.t1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . exon 23236 23339 . + . ID=g7906.t1.exon3;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . CDS 23236 23339 . + 0 ID=cds.g7906.t1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . exon 23459 24908 . + . ID=g7906.t1.exon4;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . CDS 23459 24887 . + 1 ID=cds.g7906.t1;Parent=g7906.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 24888 24908 . + . ID=g7906.t1.utr3p1;Parent=g7906.t1 #PROT g7906.t1 g7906 MLGLRLSRPLLRSACDSVRRSISTLLHGSGDDGPWASVIGLSRLATVMYGDHAMEERNAPSVFKAAGLLLCDDVDGVPSILVAFEKRSKGSQLCHNPLGGKRETCDDDALVTACREFQEETGNLLWPGVDCRTAALRLRSLVTTAGVRCAYHPPSKYAIFVASCRDMPEEERARILQLPAKFAEMRHLELALSPQPNEVHSVAVALPVGSTISSTENVCTVAEQVPTQLPWERPYNINGNVGDPPTPPSTVGSDLTIVRALESEKCAVPVSVSDCFTGVHLTVTCADGVVDPWCLPTNASDCGVHSVGAVDSRFDGAPSIGSTVDAVPLLSANSVLPASAESETYLSNVDVEGQQNGEEGGHAQHTDPDDSRNEPNQSCGEIATNTHCHGADACPAATEEVSKTTQTPTKMRPVRNRTGVEHKSPAHRVCVAAKLEWIPLPTLLHHSDIAKSLLLDTPSFRPSYLMRSVAYTLASDGDLRNYLQDACGVSVISFRQQNGSPLRPLRGDSENLASHSPSPSTPPVSAVSSADASATAKEKYKTRRKCRRSNRKSGLAGDGSQAENLPAGVVLDSAPVQGLSDVDETSAGVASMNINVAA* # PASA_UPDATE: g7902.t1, single gene model update, valid-1, status:[pasa:asmbl_1054,status:12], valid-1 NODE_127_length_37076_cov_40.3831 . gene 7557 8518 . + . ID=g7902;Name=g7902.t1 NODE_127_length_37076_cov_40.3831 . mRNA 7557 8518 . + . ID=g7902.t1;Parent=g7902;Name=g7902.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 7557 7608 . + . ID=g7902.t1.utr5p1;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . exon 7557 7675 . + . ID=g7902.t1.exon1;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . CDS 7609 7675 . + 0 ID=cds.g7902.t1;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . exon 7827 7942 . + . ID=g7902.t1.exon2;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . CDS 7827 7942 . + 2 ID=cds.g7902.t1;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . exon 8101 8518 . + . ID=g7902.t1.exon3;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . CDS 8101 8169 . + 0 ID=cds.g7902.t1;Parent=g7902.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 8170 8518 . + . ID=g7902.t1.utr3p1;Parent=g7902.t1 #PROT g7902.t1 g7902 MRSLMRPLRLKDAAIRNRKESKPAICVEQMNALMNCWKSSAFDDRVCRRELMMLTECVAANAAAAKPPKDNIAVALTSFNKVR* # PASA_UPDATE: g7904.t1, single gene model update, valid-1, status:[pasa:asmbl_1064,status:3], valid-1 NODE_127_length_37076_cov_40.3831 . gene 15164 19263 . - . ID=g7904;Name=g7904.t1 NODE_127_length_37076_cov_40.3831 . mRNA 15164 19263 . - . ID=g7904.t1;Parent=g7904;Name=g7904.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 19167 19263 . - . ID=g7904.t1.utr5p1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 19020 19263 . - . ID=g7904.t1.exon1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 19020 19166 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 18467 18882 . - . ID=g7904.t1.exon2;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 18467 18882 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 17997 18223 . - . ID=g7904.t1.exon3;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 17997 18223 . - 1 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 17709 17812 . - . ID=g7904.t1.exon4;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 17709 17812 . - 2 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 17405 17519 . - . ID=g7904.t1.exon5;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 17405 17519 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 16974 17067 . - . ID=g7904.t1.exon6;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 16974 17067 . - 2 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 16538 16667 . - . ID=g7904.t1.exon7;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 16538 16667 . - 1 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 16217 16279 . - . ID=g7904.t1.exon8;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 16217 16279 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 15839 15931 . - . ID=g7904.t1.exon9;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 15839 15931 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 15518 15568 . - . ID=g7904.t1.exon10;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 15518 15568 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . exon 15164 15341 . - . ID=g7904.t1.exon11;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . CDS 15270 15341 . - 0 ID=cds.g7904.t1;Parent=g7904.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 15164 15269 . - . ID=g7904.t1.utr3p1;Parent=g7904.t1 #PROT g7904.t1 g7904 MTNDVEMKDADQAKAATETEAPVVKDPNVLAIADIRNNITLIEKGVAIKETRYATRVLRTTVSLRRKLNPTVLRAAISAHFPIAASESKTELLKYVDALGPVAMEVDAGPGVPATPSAKDDAKKKVVTAVLPEVDVYIHLLVLVALLDAKKNGDALDCANAIARKVQGQNRRTLDHVAARAYFYYARAYEVNGQLGEIRNTLHATLRTATLQHDEATQASVINLLLRYYTEHSLYDQADKLVSKSTFPESANNNEWARYLYYLGRIKAIQLDYSESQKNLQQAIRKAPQTSAVGFQQTANKLAIIVQLLLGEIPERSLFRQKTLSTALKPYFQLTQAVRVGDLATFSHVVEKHADAFRADKNLTLIHRLRHNVIKTGVRMINLSYSRISLVDIAKKLQLDSPEDAEYIVAKAIRDGVIEATIDHEQGFVQSKENVDIYTSTEPQAAFHQRITFCINIHNESVKALRFPPNAHRKDIETDEERREREREESELAKEIADEEDDF* # PASA_UPDATE: g7909.t1, single gene model update, valid-1, status:[pasa:asmbl_1058,status:12], valid-1 NODE_127_length_37076_cov_40.3831 . gene 35376 36915 . + . ID=g7909;Name=g7909.t1 NODE_127_length_37076_cov_40.3831 . mRNA 35376 36915 . + . ID=g7909.t1;Parent=g7909;Name=g7909.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 35376 35534 . + . ID=g7909.t1.utr5p1;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . exon 35376 35669 . + . ID=g7909.t1.exon1;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . CDS 35535 35669 . + 0 ID=cds.g7909.t1;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . exon 35894 35924 . + . ID=g7909.t1.exon2;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . CDS 35894 35924 . + 0 ID=cds.g7909.t1;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . exon 36117 36416 . + . ID=g7909.t1.exon3;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . CDS 36117 36416 . + 2 ID=cds.g7909.t1;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . exon 36701 36915 . + . ID=g7909.t1.exon4;Parent=g7909.t1 NODE_127_length_37076_cov_40.3831 . CDS 36701 36915 . + 2 ID=cds.g7909.t1;Parent=g7909.t1;3_prime_partial=true #PROT g7909.t1 g7909 MVAIRPLVLVVLAVAAVAGTALAVAPPPEWQARIDQAEMLFSHEEPSDKELMPMIGNGYIGHAIGSNAIFSTGLYVGLRHLWQYYINSDRARIPSTSCAAVVGVEACRERGLAVTEVGIAVDYARAVVYRRWIVDAAVVEFRWYCHQSRKAILVVEIDVDNSAGSASLDIPVHAPYVFESEDIGFKKVAGAAGTRAANASVYAGKVLRKENPYTHEILQDVAVVYDG # ORIGINAL: g7908.t1 original gene structure, not modified by PASA NODE_127_length_37076_cov_40.3831 AUGUSTUS gene 33726 34295 . + . ID=g7908;Name=g7908.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS mRNA 33726 34295 . + . ID=g7908.t1;Parent=g7908;Name=g7908.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS exon 33726 34295 . + . ID=g7908.t1.exon1;Parent=g7908.t1 NODE_127_length_37076_cov_40.3831 AUGUSTUS CDS 33726 34295 . + 0 ID=cds.g7908.t1;Parent=g7908.t1 #PROT g7908.t1 g7908 MPAQPSNFGRRPATAGNNPHRATQAQAMEPLLPTQMIPADDSHDDGIFFGLRPDPIYSGFLSAHSDTQSPNMPSFFSTNDPMLLVTKVYGMPSLGNAHQATAADRRSKQAPLPTFPSILVLGDHIGDVVQPDSISPFPTMHWSNTVGCSNLDLHTDFELCAMESHATADTDVTDCNTAPDMLRQAANMC* # PASA_UPDATE: g7901.t1, single gene model update, valid-1, status:[pasa:asmbl_1062,status:3], valid-1 NODE_127_length_37076_cov_40.3831 . gene 2777 7277 . - . ID=g7901;Name=g7901.t1 NODE_127_length_37076_cov_40.3831 . mRNA 2777 7277 . - . ID=g7901.t1;Parent=g7901;Name=g7901.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 7258 7277 . - . ID=g7901.t1.utr5p1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 7150 7277 . - . ID=g7901.t1.exon1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 7150 7257 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 6977 7039 . - . ID=g7901.t1.exon2;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 6977 7039 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 6742 6826 . - . ID=g7901.t1.exon3;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 6742 6826 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 6225 6495 . - . ID=g7901.t1.exon4;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 6225 6495 . - 2 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 5847 6066 . - . ID=g7901.t1.exon5;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 5847 6066 . - 1 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 5202 5550 . - . ID=g7901.t1.exon6;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 5202 5550 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 4752 4879 . - . ID=g7901.t1.exon7;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 4752 4879 . - 2 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 4171 4629 . - . ID=g7901.t1.exon8;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 4171 4629 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 3976 4010 . - . ID=g7901.t1.exon9;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 3976 4010 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 3397 3601 . - . ID=g7901.t1.exon10;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 3397 3601 . - 1 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . exon 2777 3180 . - . ID=g7901.t1.exon11;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . CDS 2956 3180 . - 0 ID=cds.g7901.t1;Parent=g7901.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 2777 2955 . - . ID=g7901.t1.utr3p1;Parent=g7901.t1 #PROT g7901.t1 g7901 MIGFISTLCRACIPRAGVPLTASRLFRPAALSPLLKSLRRHSTATMAPTVSPFGTWKSPITSEHVVQKSVRFQGIQLDSKTRGADGTVYWAELRPDEGGRVAVCSHKPFASQGDSPVTWTPREHNARTRVHEYGGGSFWVSGGTVYYTNFGDQRLYRQSSPTEAPIPLTTDAKGERYADGFVHPDRHVIYAVRETHTEGEKEARNEICTVDALSGEQATIASGCDFYASPRVSPCGTLIAWVEWDHPNMPWDTTRLCIAKLDASTGFKTALPGHVTVAGGNDVSVMQPSWLPDGSLVYISDYTNWWNLYKIDGAAVAAMQDAGSVKPVALRPEAAEYGQPHWTFAMSTYGVGADGAVLACSKDWIGLVNSKTLEATRVNPGFTSYTSVWMGADGTAYFVAGSPDKFSQVIAHRTATGESRVVRISTPLEIDTAYISVPKHIEFPTTNGRTSHGYFYAPRNKDYSGPSDELPPLLVKVHGGPTAATGDTLAVLMQYWTSRGFAVLDVNYGGSTGYGREYRSRLNGNWGIVDVDDCCNGALYLANEAKEVDGKRLAIDGGSAGGYTTLAALAFKKVFAAGCSNYGVSDIEALAKDTHKFESRYMDILVGPYPAARDVYLERSPINHIDGITCPIILFQGDEDKIVPPDQSERMFEAVRTKGIPTAYVLFKGEQHGFRNADNIRTALDGEFYFYSRVFKFTPADEASLPSAAITIHNM* # PASA_UPDATE: g7907.t1, single gene model update, valid-1, status:[pasa:asmbl_1056,status:12],[pasa:asmbl_1057,status:12], valid-1 NODE_127_length_37076_cov_40.3831 . gene 25701 31131 . + . ID=g7907;Name=g7907.t1 NODE_127_length_37076_cov_40.3831 . mRNA 25701 31131 . + . ID=g7907.t1;Parent=g7907;Name=g7907.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 25701 25857 . + . ID=g7907.t1.utr5p1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 25701 26118 . + . ID=g7907.t1.exon1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 25858 26118 . + 0 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 26233 26361 . + . ID=g7907.t1.exon2;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 26233 26361 . + 0 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 26734 26877 . + . ID=g7907.t1.exon3;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 26734 26877 . + 0 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 27202 27326 . + . ID=g7907.t1.exon4;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 27202 27326 . + 0 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 27553 27648 . + . ID=g7907.t1.exon5;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 27553 27648 . + 1 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 27937 28035 . + . ID=g7907.t1.exon6;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 27937 28035 . + 1 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 28311 28427 . + . ID=g7907.t1.exon7;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 28311 28427 . + 1 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 28605 28723 . + . ID=g7907.t1.exon8;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 28605 28723 . + 1 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 28987 29421 . + . ID=g7907.t1.exon9;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 28987 29421 . + 2 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 29628 29774 . + . ID=g7907.t1.exon10;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 29628 29774 . + 2 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 29965 30098 . + . ID=g7907.t1.exon11;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 29965 30098 . + 2 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 30451 30545 . + . ID=g7907.t1.exon12;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 30451 30545 . + 0 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . exon 30683 31131 . + . ID=g7907.t1.exon13;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . CDS 30683 30827 . + 1 ID=cds.g7907.t1;Parent=g7907.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 30828 31131 . + . ID=g7907.t1.utr3p1;Parent=g7907.t1 #PROT g7907.t1 g7907 MDAVETAAAGGLEVADIAIIAAILVGIVFLIYTRPQKVKVQSTSSAKRLSTSDAKGTAAAAKTPATAAAVNKPAPKDTSFVGRMKTSNKNMVVFYGSQTGTAEDCANRLAKEAQFFGFRALALDVADYELSDLARMKEIPNSVAIFCIATYGEGEPTDSSQAFHDWLIEEDVDANLSSVFALGNKTYEHYNAMGRLVDKRLEELGGQRLYERGEGDDDGNLEEDFVNWKQAMWPALCTHFGLPVPDMSQQKSLRQYTLKTYESAPTQGVFIGEMFRIGSYSKQQPPFDAKNPFLAKVAVNRELHKSGNRSCRHIELDITGSGISYQAGDHVAVYAENDPALVDALIKRLGADANTIFSLEPMDVGGTKKRAFPLPCTYRTAFLHYLDITSIVRTNVLRDLAEYASDPKDKDFLLRVTSPEGKKEYHEWVVTPQRTLLDALEALHSWQPPIDHVIELLPRLQCRYYSISSSPKAHPQSIHVTSAVVMYTTSTGREAKGVATNWLKALDVGAKVPVYVRRSTFRLPKNVSTPAVMIGPGTGLAPFRGFIQDRAAASAPAGGSKGAMVLFFGCRNRASDFIYEDELRAFESSGAVALHVAFSRDQATKDYVTHHLRNNKDRIWELIDKQGGHLYVCGDGRHMSKDVHALLLGIVMEKTGGSAADGEKYIKKLQTTGRYQQDVWS* # PASA_UPDATE: g7903.t1, single gene model update, valid-1, status:[pasa:asmbl_1063,status:12], valid-1 NODE_127_length_37076_cov_40.3831 . gene 8775 14669 . - . ID=g7903;Name=g7903.t1 NODE_127_length_37076_cov_40.3831 . mRNA 8775 14669 . - . ID=g7903.t1;Parent=g7903;Name=g7903.t1 NODE_127_length_37076_cov_40.3831 . five_prime_UTR 14611 14669 . - . ID=g7903.t1.utr5p1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 14500 14669 . - . ID=g7903.t1.exon1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 14500 14610 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 13272 14341 . - . ID=g7903.t1.exon2;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 13272 14341 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 12966 13055 . - . ID=g7903.t1.exon3;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 12966 13055 . - 1 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 12703 12754 . - . ID=g7903.t1.exon4;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 12703 12754 . - 1 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 12352 12426 . - . ID=g7903.t1.exon5;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 12352 12426 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 11862 11967 . - . ID=g7903.t1.exon6;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 11862 11967 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 11342 11686 . - . ID=g7903.t1.exon7;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 11342 11686 . - 2 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 10897 11156 . - . ID=g7903.t1.exon8;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 10897 11156 . - 2 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 10634 10714 . - . ID=g7903.t1.exon9;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 10634 10714 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 10291 10386 . - . ID=g7903.t1.exon10;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 10291 10386 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 9771 10070 . - . ID=g7903.t1.exon11;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 9771 10070 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . exon 8775 9577 . - . ID=g7903.t1.exon12;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . CDS 9131 9577 . - 0 ID=cds.g7903.t1;Parent=g7903.t1 NODE_127_length_37076_cov_40.3831 . three_prime_UTR 8775 9130 . - . ID=g7903.t1.utr3p1;Parent=g7903.t1 #PROT g7903.t1 g7903 MEFHAEGADVRSIKARVAASIAGVKLDTKPLTPAVQRNVPHLNAALKTPILFASGQWFANPNAIVLRILNGKLAAKAPFASAKIAEWLDWEESKLSPHVTALVAHLSGAEKLPEADLNEARKATVGLLGHLNASFASNKFVAGADLSAADIVIFATLVPALVSEGGLLPADARASIPNVIEWFAAREKDALFASAIPKGAKPGTLRAPFDRQAYAEAKELTAEHRRHHQGAASAHAAIEAAVQQESLSQSVDLEVRASKDEIAASLAEISKPTPDAHARIRERSHPILPQHNERNLLITSALPYVNNVPHLGNIIGCVLSADVYARFARLRDYNVLYVCGTDEYGTATETKALEEGLTPQQICDKYHKLHKEIYEWFNISFDKFGRTTTEQQKVISQDIFLKCHKNGFLLEDKVEQLHCAKCDRFLADRFVEGTCPFCKYPDARGDQCDKCGKLINAIELIDPKCKICNDRPGPRTSSHMFLDLPKIEGELRKWIDSSSVTGEWAQNGIGISYAWLNSKEGLRPRCITRDLKWGVPVPLKGFEDKVFYVWFDAPIGYISITATYTEHWEKWWKNPQQVQLYQFMAKDNVPFHTIIFPSSLIAAQDNYTLLHHVNSTDYLNYEDGKFSKSRGIGVFGNDVMSTGIPSDIWRFYLLSVRPETQDSAFAWSDFVSRNNSELLNNLGNFVNRALSFVKNTYGGRVPKAIPGEEEGNLGAHVTRCIKEFNACLEKVRLREGLRVVLGVSRLGNQYMQQQAPWKLVKEGKAERAATAIAACVSCVHLLATLLHPYMPTTADQILLQLNALRLPLLDEHFRITIPEGHSIGEPKPLFAKIEPSVADELKKRFAGTQAQQAATAAATTAKSQSAASPSPAPASASSPVDIATIEAEVNAQGEKVRKLKAEKADKKVVDAEVASLLALKGKLTAAKSQATAAPTTSPAAPAPASAPASASEVAAIEAEVNAQGEKVRKLKAEKADKKVVEAAVASLLALKGKLTAAKGEAPASASTKKK* # PASA_UPDATE: g405.t2, single gene model update, valid-1, status:[pasa:asmbl_6555,status:12], valid-1 # PASA_UPDATE: g405.t1, single gene model update, valid-1, status:[pasa:asmbl_6554,status:12], valid-1 NODE_3798_length_2727_cov_37.727 . gene 42 1508 . + . ID=g405;Name=g405.t2 NODE_3798_length_2727_cov_37.727 . mRNA 42 1508 . + . ID=g405.t2;Parent=g405;Name=g405.t2 NODE_3798_length_2727_cov_37.727 . exon 42 320 . + . ID=g405.t2.exon1;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . CDS 42 320 . + 0 ID=cds.g405.t2;Parent=g405.t2;5_prime_partial=true NODE_3798_length_2727_cov_37.727 . exon 507 620 . + . ID=g405.t2.exon2;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . CDS 507 620 . + 0 ID=cds.g405.t2;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . exon 827 914 . + . ID=g405.t2.exon3;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . CDS 827 914 . + 0 ID=cds.g405.t2;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . exon 1079 1508 . + . ID=g405.t2.exon4;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . CDS 1079 1203 . + 2 ID=cds.g405.t2;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . three_prime_UTR 1204 1508 . + . ID=g405.t2.utr3p1;Parent=g405.t2 NODE_3798_length_2727_cov_37.727 . mRNA 42 1508 . + . ID=g405.t1;Parent=g405;Name=g405.t2 NODE_3798_length_2727_cov_37.727 . exon 42 320 . + . ID=g405.t1.exon1;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . CDS 42 320 . + 0 ID=cds.g405.t1;Parent=g405.t1;5_prime_partial=true NODE_3798_length_2727_cov_37.727 . exon 504 620 . + . ID=g405.t1.exon2;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . CDS 504 620 . + 0 ID=cds.g405.t1;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . exon 827 914 . + . ID=g405.t1.exon3;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . CDS 827 914 . + 0 ID=cds.g405.t1;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . exon 1079 1508 . + . ID=g405.t1.exon4;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . CDS 1079 1203 . + 2 ID=cds.g405.t1;Parent=g405.t1 NODE_3798_length_2727_cov_37.727 . three_prime_UTR 1204 1508 . + . ID=g405.t1.utr3p1;Parent=g405.t1 #PROT g405.t2 g405 PHLETGRTAHVTGTGVRRTMRPATTTTSDTHPATATAQAHVTHVTPVIRETHVTTTAVTPATTRGTRAIMTAGVDLILAVLIRMIRTIADTIEHTIVRMTAMTGPQLPTIADHPAILHPPRARLTPLPPTHTPGCTLPLAHPARGTIGTEMRLGEHMTGTAGIPHQWTRVCTTRVLHTAHTLRHTTATIAANRQSFLENGL* #PROT g405.t1 g405 PHLETGRTAHVTGTGVRRTMRPATTTTSDTHPATATAQAHVTHVTPVIRETHVTTTAVTPATTRGTRAIMTAGVDLILAVLIRMIRTIADTIEQHTIVRMTAMTGPQLPTIADHPAILHPPRARLTPLPPTHTPGCTLPLAHPARGTIGTEMRLGEHMTGTAGIPHQWTRVCTTRVLHTAHTLRHTTATIAANRQSFLENGL* # PASA_UPDATE: g406.t1, single gene model update, valid-1, status:[pasa:asmbl_6553,status:12], valid-1 NODE_3798_length_2727_cov_37.727 . gene 1649 2706 . - . ID=g406;Name=g406.t1 NODE_3798_length_2727_cov_37.727 . mRNA 1649 2706 . - . ID=g406.t1;Parent=g406;Name=g406.t1 NODE_3798_length_2727_cov_37.727 . five_prime_UTR 2609 2706 . - . ID=g406.t1.utr5p1;Parent=g406.t1 NODE_3798_length_2727_cov_37.727 . exon 1649 2706 . - . ID=g406.t1.exon1;Parent=g406.t1 NODE_3798_length_2727_cov_37.727 . CDS 1733 2608 . - 0 ID=cds.g406.t1;Parent=g406.t1 NODE_3798_length_2727_cov_37.727 . three_prime_UTR 1649 1732 . - . ID=g406.t1.utr3p1;Parent=g406.t1 #PROT g406.t1 g406 MCPPELYLIMRKCWEVVVDNRPSFSDLSSSIAALLSSAPSIVIENMSEYHDLPRSASGDLGPASADSNSMVGRIAQFATNARQRLGSIVAATMHGTQSSGGDRHRPALLHPEYTEFVSLHGGAPRRSTDQGTMHVNPLTINVTAGDGDGGNDYQLDAHGTMLSVPLGGGGGLSINLDKARPPSPSRTLRPDGYDQYPGDPTDTLNVHVGTHLRKGSESGCSYVNDDFVFSTAAESQLGKQMEQLALVEEPLALKQKAGYDVLPQHSRMSTMSLSEKRASCEAYDNYGEEEL* # PASA_UPDATE: g6520.t1, single gene model update, valid-1, status:[pasa:asmbl_6982,status:12], valid-1 NODE_4113_length_2174_cov_35.8518 . gene 133 2174 . - . ID=g6520;Name=g6520.t1 NODE_4113_length_2174_cov_35.8518 . mRNA 133 2174 . - . ID=g6520.t1;Parent=g6520;Name=g6520.t1 NODE_4113_length_2174_cov_35.8518 . five_prime_UTR 2174 2174 . - . ID=g6520.t1.utr5p1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . exon 1959 2174 . - . ID=g6520.t1.exon1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 1959 2173 . - 0 ID=cds.g6520.t1;Parent=g6520.t1;5_prime_partial=true NODE_4113_length_2174_cov_35.8518 . exon 1676 1747 . - . ID=g6520.t1.exon2;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 1676 1747 . - 1 ID=cds.g6520.t1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . exon 1110 1181 . - . ID=g6520.t1.exon3;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 1110 1181 . - 1 ID=cds.g6520.t1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . exon 730 843 . - . ID=g6520.t1.exon4;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 730 843 . - 1 ID=cds.g6520.t1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . exon 393 464 . - . ID=g6520.t1.exon5;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 393 464 . - 1 ID=cds.g6520.t1;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . exon 133 201 . - . ID=g6520.t1.exon6;Parent=g6520.t1 NODE_4113_length_2174_cov_35.8518 . CDS 133 201 . - 1 ID=cds.g6520.t1;Parent=g6520.t1;3_prime_partial=true #PROT g6520.t1 g6520 APALSSLPADVAWIKASVSITLYGPLFVSAVQHLKRFVTFIPLGRVCRVLTNTQYQSFPSRLLWNNTNLETLEIANIQFYTFEDGFFFNLTNLISLTIRDVNIDVLSNDTFSKLTQLQYLHFSNPYSIPVRRRSVVSGGLATVLQPGLLDNLVELTEVHFENVQYKDFPADFFRKLNSLVKVSVSGSRSSIPSGLFANLTKLEY # PASA_UPDATE: g10807.t1, single gene model update, valid-1, status:[pasa:asmbl_4352,status:12], valid-1 NODE_2457_length_6196_cov_48.6167 . gene 235 6196 . - . ID=g10807;Name=g10807.t1 NODE_2457_length_6196_cov_48.6167 . mRNA 235 6196 . - . ID=g10807.t1;Parent=g10807;Name=g10807.t1 NODE_2457_length_6196_cov_48.6167 . five_prime_UTR 6196 6196 . - . ID=g10807.t1.utr5p1;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . exon 1425 6196 . - . ID=g10807.t1.exon1;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . CDS 1425 6195 . - 0 ID=cds.g10807.t1;Parent=g10807.t1;5_prime_partial=true NODE_2457_length_6196_cov_48.6167 . exon 1047 1171 . - . ID=g10807.t1.exon2;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . CDS 1047 1171 . - 2 ID=cds.g10807.t1;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . exon 732 849 . - . ID=g10807.t1.exon3;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . CDS 732 849 . - 0 ID=cds.g10807.t1;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . exon 235 552 . - . ID=g10807.t1.exon4;Parent=g10807.t1 NODE_2457_length_6196_cov_48.6167 . CDS 235 552 . - 2 ID=cds.g10807.t1;Parent=g10807.t1;3_prime_partial=true #PROT g10807.t1 g10807 PSLSSPLSPWPRAAQSFQNDVSSIAGWRVEAADPTTVPAIRTFYIDDVSFVRRDCAGAEDSLNIALMKPVTCSSTYGAEYGCALVVDGVKTDFGRRWSSAFRPSFSDETVDIDLGYSHAIDSIKIYWAIPATFYDVDILLDSGRYANVASISYNTDHVREHVMAAGTRASSVRVTMRAQGGQSVYSIYEVEILGRNTRAIIAGSVCTVAYGASCYSMQSVPLPKDRATAACVALGGKTAVLSEDEYAHVFTLVPQTPFWVATAGVGATTADDARNCVQRNGRNYELTSCENFLPYLCELPIGIDSFRQGYHISKACGGAACPGSPFSDPPVVSVPKEVSANEGFPTSLQFTFDDRDSTGPFSALVDWDDGSAERVTIDAGTWVVTRKHIYSSSGLYRATVTVSDSEGSFGSASAVFRIFNVAPSVPAAVAIECYEGALCSVNVPVADDGAGNAHTIIAEWADPLLDGIVMQTYVLSVEAISLAVSKQIPSFGTPRSIDLRLTVRDDGGANTTHSMKVIVRTSKLRELADIAAGWITTTATTPATKTMKLDRKTVRSYGGADMEALVSAQLGWMPNMLDSVASLTLTDVEMRVIDAVYPLTPRVIVKGTAARIDSLYFTTSVVVAINLFVRRIPFESREMAVVVEVPDTVVREQVGLDSTTIIPISIPWRPDYAFPATDVFTSWLGSFDFESTTMTISTTSLTISQARALFGDTLVAHSATASEFDRFSTSLGKLIDTLTDLFSNTVHHTIIEKGVNFYANVKYNFRVPSFDTLNRLFSGLSAKPLRSDNPLTLWGGFILEPVGPLFNYSRVVSSRFRINLDAPMNVFRDDPNADLIVTGPVVIQIEGVQRSPAGALFGADSTRPSTLFLNAVVSVRMREFGTMSFFVEQSRWQLAKNNHGTATLTGSVVQPVPFNVYGRPWLQLTSVQVTCQLRTDADQMMTEFEMNGIAAVNMPYDPPSAAHSLRVTALARLVLNLANNVFTIESFLRTSPELPMKATTTTNITSYLWLGSTTAIPQDKAFDLTPLPNRGVDLVLATADFVDYGVTKGFSITTVGQLRGWLLNELTILSESYDAVALATFKLSIQGQLFDITRGSEPGLDVVIAGSPFDIVSPGLRMSRLVVRARLTRSGPTDIAAAFVMTGRLRLNFDRNARSNVIMFDTKAAWTYGQDITISGGSSAVWNPFGESWITLNALQIRLNFPKSCFGDNSFPNVVACHDSRVAAMPFRTGFTVDGAYSVNIHGVRITLPADVFVRRNFATGLYEGAVVPRVPLPVRDSSTVSLLVGQIMRSRTVFDAKAYDDFLGALSTPVSSVFAYPSAGGLFDTTFLNTQMSTTYKTESLPYADPIAEFPATSAVPQFTDTFLPASSSTTNAAKRFLYFVISSSNIDTGYPAKDIAGAAANGRVLYEGITIYDKFIVDGVALSKYLAALPEAAPLGQKSSEAIVALRVPILTAASVSEGELDVYFLGTTKAPIESVKTMRTQMQIWQSKDALVLRGYGCPLNRFNCKAAVYGAQIDSKPFALADNPPTSHVELLSVRPPRVYSEDCSTPPCIPANKEYTCDSCSIGFIGTEEGCYASDSSLLFDSCSAGSCLDGRGVYDYIKNYCECNKGWRNRDVRSPCAICAPGFYPQVPGMELGMPVLPVNTTYCSVVCTPSTCPTGVCDDFGVCRTCGPNGFWNATANGVAARKWNLQQCTCKPGFAHTPTEPCGMCVADYYPHPNITARAIASGLNMSLVVPACSVNCSLTYCGGVCNENGTCVTAPPYIPSAFELFFSL # ORIGINAL: g2529.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 9313 12738 . + . ID=g2529;Name=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 9313 12738 . + . ID=g2529.t1;Parent=g2529;Name=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 9313 9515 . + . ID=g2529.t1.exon1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 9313 9515 . + 0 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 9707 9774 . + . ID=g2529.t1.exon2;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 9707 9774 . + 1 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 10121 10269 . + . ID=g2529.t1.exon3;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 10121 10269 . + 2 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 10357 11041 . + . ID=g2529.t1.exon4;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 10357 11041 . + 0 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 11165 11379 . + . ID=g2529.t1.exon5;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 11165 11379 . + 2 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 11510 11624 . + . ID=g2529.t1.exon6;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 11510 11624 . + 0 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 11722 11770 . + . ID=g2529.t1.exon7;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 11722 11770 . + 2 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 11875 12060 . + . ID=g2529.t1.exon8;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 11875 12060 . + 1 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 12134 12267 . + . ID=g2529.t1.exon9;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 12134 12267 . + 1 ID=cds.g2529.t1;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 12377 12738 . + . ID=g2529.t1.exon10;Parent=g2529.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 12377 12738 . + 2 ID=cds.g2529.t1;Parent=g2529.t1 #PROT g2529.t1 g2529 MERRAIDSPEHARARQGGLAQTATCRARAVDSGPTATPPATARMVRVAIVLWGCVIALRGGRVQNAISCNRFDGTCTCTPGSGFYGSSCSLPKVNATVELSEYGIGIRLRWYHDDVGPRAWNNSWRYEISRTGCFSKLYQVGDVLTFLDTDVVINQGYSYYVRAYNGRNVSAETEALAGIRDLQKTERPSPPYNVSSTPTLNPDNQQAMIKFTWKEDTSSGSIIKTFIFRDGLLVLEGPMDTEYKDRDVVFGKTYVYEIISVNHIGNSTATRFSEKASVGPSDSGTPTAGTSSSGSVAGPVAGGVVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKVSDFSSTDLLCFCIDIARGMDHLAKCEIVHRDLAARNCMVVAGPRAPNTIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLACAAMEACWRKHPETRPQFSQLVLQLRRGMAVLCGTEGGGGGNLGGDNVPDSVDALGRSKPFAITFPEGAYAETVGEDESLYTLQNPIFRKDNNSLSGHSSA* # ORIGINAL: g2531.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 17014 20841 . + . ID=g2531;Name=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 17014 20841 . + . ID=g2531.t1;Parent=g2531;Name=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 17014 17323 . + . ID=g2531.t1.exon1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 17014 17323 . + 0 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 17455 17739 . + . ID=g2531.t1.exon2;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 17455 17739 . + 2 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 17836 18242 . + . ID=g2531.t1.exon3;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 17836 18242 . + 2 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 18355 19039 . + . ID=g2531.t1.exon4;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 18355 19039 . + 0 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 19188 19402 . + . ID=g2531.t1.exon5;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 19188 19402 . + 2 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 19533 19647 . + . ID=g2531.t1.exon6;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 19533 19647 . + 0 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 19736 19784 . + . ID=g2531.t1.exon7;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 19736 19784 . + 2 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 19893 20078 . + . ID=g2531.t1.exon8;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 19893 20078 . + 1 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 20248 20381 . + . ID=g2531.t1.exon9;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 20248 20381 . + 1 ID=cds.g2531.t1;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 20483 20841 . + . ID=g2531.t1.exon10;Parent=g2531.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 20483 20841 . + 2 ID=cds.g2531.t1;Parent=g2531.t1 #PROT g2531.t1 g2531 MARHAIDSPERVHALLGGRVLTATSRVPVVVLAPIAAVFAIVRTAQRATGSPERAIALLGGRVVTVTMHARAIVLEPTALEVAPATTELQRATDSPVCAIALRGWMGGKCDLACASDHFGVHCTQSCTCKNGAACDRFTGACSCTAGWTGATCNAECPPGQYGPNCSLMCACGNGGCNRFNGTCTCTPGSGFYGSSCSSCACNRGVCDDGFLGTGTCDCSALLGVGGPNCNTTCDRLPGAQMYGYGCTTPCACENGAACDASAGECTCAFGWTGVVCNLIVPPSVPKVNATAELTQYGIGIRLRWSHDEVGPRAWNSTWRYEIRRAGCFPKVYQVGDVLTFIDTDVVINQGYTYFVQAYNSRNVSSTTAGQISIERLEKAELPLPPYNVSSTPTLNPDNQQAMIKFTWKEDISSGPIIKTFIFRDGRLVLEGPMATEYKDRDVVFGKTYVYEIISVNQYGNSTATRFSEKASIGPSDSGTPTAGASSSGSVAGPVAGGVVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKVSDFSSTDLLCFCVDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNPIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKPVYAAMESCWRKHAETRPQFSQLVLQLRRGMAVLCGTEGGGGNLGGDNVRDSVVALGRSKPFALSDPEGAYAETAGEDESLYTLENPIFQKDSNSLTGHSSA* # ORIGINAL: g2528.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 5891 8792 . + . ID=g2528;Name=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 5891 8792 . + . ID=g2528.t1;Parent=g2528;Name=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 5891 5968 . + . ID=g2528.t1.exon1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 5891 5968 . + 0 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 6159 6250 . + . ID=g2528.t1.exon2;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 6159 6250 . + 0 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 6394 6465 . + . ID=g2528.t1.exon3;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 6394 6465 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 6644 6715 . + . ID=g2528.t1.exon4;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 6644 6715 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 6956 7027 . + . ID=g2528.t1.exon5;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 6956 7027 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 7119 7190 . + . ID=g2528.t1.exon6;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 7119 7190 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 7290 7361 . + . ID=g2528.t1.exon7;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 7290 7361 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 7450 7521 . + . ID=g2528.t1.exon8;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 7450 7521 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 7610 7681 . + . ID=g2528.t1.exon9;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 7610 7681 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 7928 7999 . + . ID=g2528.t1.exon10;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 7928 7999 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 8244 8315 . + . ID=g2528.t1.exon11;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 8244 8315 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 8399 8470 . + . ID=g2528.t1.exon12;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 8399 8470 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 8717 8792 . + . ID=g2528.t1.exon13;Parent=g2528.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 8717 8792 . + 1 ID=cds.g2528.t1;Parent=g2528.t1 #PROT g2528.t1 g2528 MQSLVGETLAVQSVMESNVGRPGGMSVEGVIGACPDTCTCNGGAVLSCAIPAGTTTLNWAGRQLTSIASGLFDGLPGLKGLHLYSNQIATLPSGIFDKLTALTALPLSSNQIVTLPSGIFDKLTALAVLRLYSNQIATLPSGIFDKLTALSELRLDSNQIATLPSGIFDKVTALTTLQLDSNRIAALPSGIFDKLTTLATLRLNSNQISTLPAGIFDKLTGLTYLSLNSNQIATLPSGIFDKLTALTELGLYSNQVATLPSGIFAKLTGLTYLYLDSNRIATLPNGIFDKLTTLATLYLNSNQIATLPSGIFDKLIVLANL* # ORIGINAL: g2530.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 13467 15912 . + . ID=g2530;Name=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 13467 15912 . + . ID=g2530.t1;Parent=g2530;Name=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 13467 13774 . + . ID=g2530.t1.exon1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 13467 13774 . + 0 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 14260 14331 . + . ID=g2530.t1.exon2;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 14260 14331 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 14593 14664 . + . ID=g2530.t1.exon3;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 14593 14664 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 15059 15130 . + . ID=g2530.t1.exon4;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 15059 15130 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 15370 15441 . + . ID=g2530.t1.exon5;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 15370 15441 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 15523 15594 . + . ID=g2530.t1.exon6;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 15523 15594 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 15846 15912 . + . ID=g2530.t1.exon7;Parent=g2530.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 15846 15912 . + 1 ID=cds.g2530.t1;Parent=g2530.t1 #PROT g2530.t1 g2530 MEKNVGRPGGVNVSVSIVLTYHDNRSVVKLNVYLACSAYLQGNRRFVSVVDARVGFHNRLGALVVAVCLLCQVEGVIGACPDTCTCNGGAVLSCAIPAGTIDVDLYSNQITTLPSGIFDKLTALTQLRLYSNRFATLPSGIFDKLTALTRLYLSSNQIATLPSGIFDKLIALTYLYLNSNQIATLPSGIFDKLTALSWLGLSSNNITTLQSGIFDKLTLLNSLYLNIATLSSGIFDKLTRLTEL* # ORIGINAL: g2532.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 22456 23350 . + . ID=g2532;Name=g2532.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 22456 23350 . + . ID=g2532.t1;Parent=g2532;Name=g2532.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 22456 23350 . + . ID=g2532.t1.exon1;Parent=g2532.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 22456 23350 . + 0 ID=cds.g2532.t1;Parent=g2532.t1 #PROT g2532.t1 g2532 MAYPTTDSFYNTSAKACELAIKKFSEADPDCDDYCVDDVNVISVFFERVIRCGTLAFEGVDPATENELLLAELNKYAADKDMRFGAKSIVHQDLPLLAKIQFARYYRVWTLLNPTFCFSVRVGVSILHSVDDLYANREITQFERTVLLTYLWAAIVDTSGMLFRNESACHVLKALFEFHSQQRSIAGGRVIPTKANKDSYESIAERDMAMRRIVMGHVLSSDGTIIDTTTGGPTFADVLRAAAPVRSISGWYEGTWSNSYISEYAALECNEPTTDLDELVRTAVVLPNIPVWAPHISK # ORIGINAL: g2527.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 1378 4147 . + . ID=g2527;Name=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 1378 4147 . + . ID=g2527.t1;Parent=g2527;Name=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 1378 1381 . + . ID=g2527.t1.exon1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 1378 1381 . + 0 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 1872 1963 . + . ID=g2527.t1.exon2;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 1872 1963 . + 2 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 2057 2244 . + . ID=g2527.t1.exon3;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 2057 2244 . + 0 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 2638 2709 . + . ID=g2527.t1.exon4;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 2638 2709 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 2789 2860 . + . ID=g2527.t1.exon5;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 2789 2860 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 3123 3194 . + . ID=g2527.t1.exon6;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 3123 3194 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 3432 3503 . + . ID=g2527.t1.exon7;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 3432 3503 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 3892 3963 . + . ID=g2527.t1.exon8;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 3892 3963 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 4072 4147 . + . ID=g2527.t1.exon9;Parent=g2527.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 4072 4147 . + 1 ID=cds.g2527.t1;Parent=g2527.t1 #PROT g2527.t1 g2527 MDPENRLAEDAKLAGATLSGQSIMEKNVDRRAGNGRFVSIVDVRVVGCYNRLSALVVAACLLYQVEGVMGACPDTCTCNGGAVLSCAFPSGTTSLRLNSNQLVTLPSGIFDKLTALNDLDLNTNQIATLPSGIFDKLTALNGLLLDSNQITILPIGIFDKLTGLSWLQLNSNQIATLPSGIFDKLTALIQLFFSSNKIATLPSGIFDELTALTQLGFYSNNISILPIGIFDKLTSLTIL* # ORIGINAL: g2526.t1 original gene structure, not modified by PASA NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS gene 1 465 . - . ID=g2526;Name=g2526.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS mRNA 1 465 . - . ID=g2526.t1;Parent=g2526;Name=g2526.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS exon 1 465 . - . ID=g2526.t1.exon1;Parent=g2526.t1 NODE_458_length_23350_cov_23.1403_potentialcontaminant AUGUSTUS CDS 1 465 . - 0 ID=cds.g2526.t1;Parent=g2526.t1 #PROT g2526.t1 g2526 MRRLVAGNKLALVPFDRRDKGNVLKGNLSCYLSNVRAMASAGPQQKVVFDFDGTLVNTNLAELFWHLTKRVSGWKMPFAFFIALIQSVIIIACHKLSSVKLTTQTIIWLCLRGWNVDELNKHADTIMKEFYYSRLNFASLDQLMFHLNRGDDVVI # ORIGINAL: g9853.t1 original gene structure, not modified by PASA NODE_2713_length_5368_cov_52.399 AUGUSTUS gene 127 803 . - . ID=g9853;Name=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS mRNA 127 803 . - . ID=g9853.t1;Parent=g9853;Name=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS exon 670 803 . - . ID=g9853.t1.exon1;Parent=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS CDS 670 803 . - 0 ID=cds.g9853.t1;Parent=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS exon 317 566 . - . ID=g9853.t1.exon2;Parent=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS CDS 317 566 . - 1 ID=cds.g9853.t1;Parent=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS exon 127 220 . - . ID=g9853.t1.exon3;Parent=g9853.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS CDS 127 220 . - 0 ID=cds.g9853.t1;Parent=g9853.t1 #PROT g9853.t1 g9853 MFSVLRVQSLCTESARASMMPARRALTTPAFAFEITHASKKPGSRARLGKITTAHGTIETPAFVGVGTNGTMKCLTADAAAATGLQLMFCNTYHLLLQPGPTVIEDAGGVHEFTGWSRPIITDSGGFQVFSLSHSGGSDELKGKSIKDRPSTVLKVTEE # ORIGINAL: g9854.t1 original gene structure, not modified by PASA NODE_2713_length_5368_cov_52.399 AUGUSTUS gene 1317 5296 . + . ID=g9854;Name=g9854.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS mRNA 1317 5296 . + . ID=g9854.t1;Parent=g9854;Name=g9854.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS exon 1317 4985 . + . ID=g9854.t1.exon1;Parent=g9854.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS CDS 1317 4985 . + 0 ID=cds.g9854.t1;Parent=g9854.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS exon 5153 5296 . + . ID=g9854.t1.exon2;Parent=g9854.t1 NODE_2713_length_5368_cov_52.399 AUGUSTUS CDS 5153 5296 . + 0 ID=cds.g9854.t1;Parent=g9854.t1 #PROT g9854.t1 g9854 MGSGASVPAQPDVDDLRKNLKDADSKLATLARRLEEAESRSRNTDKELEALRLRQEEDAKVIARAEADAKKLQDAEAAAMVRMEERLRLEHAAEMEALKSMFLEKLEDEKRKATEAASKERDAEHAFRDTVGETPHQVVGTSEEENPNVDRVDREEDAPDCPSNFGKLSAVDSDSSDDAPATDTVAVASPPASNVDHHRTAPPADTSTGIQREVAFADSVVAPLDEDDLDYYRDDNECAVDDGEQGRGRITAFSVLPGIGRTQAFDAADEVDNSGASTRQPYADARDRNNDHGLYGVRPSSSLGNSRPISSLGNNSRPLSSLANARPISSLGSNSRPLTSLANARPISSLGNNTRPLSSLANARPPSALASARPSSAMGGVRPVSSRAMERPSSSMGGGRPSSSQGQHERSLPPVRPQSAATSRTAHAGAGVDLPYDVVQRPSTSMGHYSDAAPEEIARPSSSRGHFSIAKDAATESKLSLGGIGGRFASQDKMPLSDSHSSLSRGHPVLPRIESTANHDIDESHVAQEGWREEEGAVGGSVNECDMDADREEKSEDENEAPDGSDGGDDVSRDTEPSVDGAVEPNANPIGARGSEETAPAGIDEAMGAVDDVDSTDNVEDNAVPPPDAATEEVDAATEEVDAAAEEVDVAAADDEIVYAGEVAGTADAATASVMDRPLYVDDPETAHPDVSDGVLRDYCAYTTEPWEDEDPDAPQLNDEGTPREAARDNGTDGQDDQDDLGGDQSEAAPRDSNATNAASRDGLEQSDEAITCGDESAGNTLNANAELIASAAALTALSDNDVLARTSSESSLEDEFDGQGEDGFLADAEKAIADAESVAAAVAAAATSSANASTDGDGTDNGSAPEGEDTQVDDEADTAALLRAESAGSLGDIADGAEARIGQVAHAVDAVDKILHAAQTQLDVSHRAEEMSHIAGASRTGRTGSKTLQKGRGKAGVSKNAEENDGIDSDDDGDDGASLSIDNLLKTVELMSLAVVPPPSNSSEDDVVASNNSTGNADAFLRNESDASLGLILDTARSSTSIASDTGMAVDRDAEDALGQRVGNLISSIEDEVDEQNAEATDKPADLLLKRLERRATNPSLFTGHSADVDGARRESMDKNATASTVDVSVTSAEESRPLDDPAVSIAAAAEVEAALRCRVPYGKGKIPPMYSTLPKRDPQTGWVTLYAFISSCFVDMHGERDILTRSVFPRLNEMCASRRVQIIPIDLRWGVRQESEVNTSALVCLNEIDKSTFFIGILGERCVLALFV* # ORIGINAL: g9654.t1 original gene structure, not modified by PASA NODE_3703_length_2925_cov_87.3074 AUGUSTUS gene 125 2097 . + . ID=g9654;Name=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS mRNA 125 2097 . + . ID=g9654.t1;Parent=g9654;Name=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS exon 125 328 . + . ID=g9654.t1.exon1;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS CDS 125 328 . + 1 ID=cds.g9654.t1;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS exon 815 965 . + . ID=g9654.t1.exon2;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS CDS 815 965 . + 1 ID=cds.g9654.t1;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS exon 1375 1512 . + . ID=g9654.t1.exon3;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS CDS 1375 1512 . + 0 ID=cds.g9654.t1;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS exon 1885 2097 . + . ID=g9654.t1.exon4;Parent=g9654.t1 NODE_3703_length_2925_cov_87.3074 AUGUSTUS CDS 1885 2097 . + 0 ID=cds.g9654.t1;Parent=g9654.t1 #PROT g9654.t1 g9654 NDLQSPECPKTPTFEDFGISALTMAALKKNSAAITASAKKGVHVVPAYKSAPAYDATAMTPRGTHKGSTRSNAATPHAPPSYAAITPSMRRTASSATPSANQHVTPGSLRKAIQPFTPRRNLANPSGTGEGQIVRHVTAEEWGTMPDYIRAQVTLDFINDTVDAISAYAQYKASEATSQGVAVAGGISQSEMREGLELGAKTKAIVLVLLKLKRILLRSSDYGDPTDPTYTIVA* # PASA_UPDATE: g6083.t1, single gene model update, valid-1, status:[pasa:asmbl_7059,status:12], valid-1 NODE_4172_length_2076_cov_31.9755 . gene 8 1928 . - . ID=g6083;Name=g6083.t1 NODE_4172_length_2076_cov_31.9755 . mRNA 8 1928 . - . ID=g6083.t1;Parent=g6083;Name=g6083.t1 NODE_4172_length_2076_cov_31.9755 . exon 1734 1928 . - . ID=g6083.t1.exon1;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . CDS 1734 1928 . - 0 ID=cds.g6083.t1;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . exon 1399 1520 . - . ID=g6083.t1.exon2;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . CDS 1399 1520 . - 0 ID=cds.g6083.t1;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . exon 948 1069 . - . ID=g6083.t1.exon3;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . CDS 948 1069 . - 1 ID=cds.g6083.t1;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . exon 480 643 . - . ID=g6083.t1.exon4;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . CDS 480 643 . - 2 ID=cds.g6083.t1;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . exon 8 99 . - . ID=g6083.t1.exon5;Parent=g6083.t1 NODE_4172_length_2076_cov_31.9755 . CDS 8 99 . - 0 ID=cds.g6083.t1;Parent=g6083.t1;3_prime_partial=true #PROT g6083.t1 g6083 MACAFCRYEHVAFVLGDAMYVFGGIAAQNKGPSMTGTQAAVVRGPMNDLWRLPLERTGNSWTEWLAMAWERLATGVEKVDGFPSPSRRHAHAAVVSGGQAYVFGGRGPGRSDGTEGETMGDLWVFRPEAVGIPRGLPWVKLEQAVNVRDKLWPGRRMGHSMMAVLGSPALFGGVLCTEAGCKGNSELWIYDVYAQKWASKTPSGGGPHGRFYFSFAAGYANVTTSRSGDSI # PASA_UPDATE: g9435.t1, single gene model update, valid-1, status:[pasa:asmbl_6066,status:12], valid-1 NODE_3439_length_3461_cov_36.866 . gene 175 2760 . + . ID=g9435;Name=g9435.t1 NODE_3439_length_3461_cov_36.866 . mRNA 175 2760 . + . ID=g9435.t1;Parent=g9435;Name=g9435.t1 NODE_3439_length_3461_cov_36.866 . five_prime_UTR 175 175 . + . ID=g9435.t1.utr5p1;Parent=g9435.t1 NODE_3439_length_3461_cov_36.866 . exon 175 1658 . + . ID=g9435.t1.exon1;Parent=g9435.t1 NODE_3439_length_3461_cov_36.866 . CDS 176 1658 . + 0 ID=cds.g9435.t1;Parent=g9435.t1;5_prime_partial=true NODE_3439_length_3461_cov_36.866 . exon 1914 2760 . + . ID=g9435.t1.exon2;Parent=g9435.t1 NODE_3439_length_3461_cov_36.866 . CDS 1914 2692 . + 2 ID=cds.g9435.t1;Parent=g9435.t1 NODE_3439_length_3461_cov_36.866 . three_prime_UTR 2693 2760 . + . ID=g9435.t1.utr3p1;Parent=g9435.t1 #PROT g9435.t1 g9435 SSFNDNVASADPSTYGSGGAIYIASFPPASTLIEACTFANNVASFGASIHVEVNGAQKYSLIASVNIANNSYVSGSGEYTSDAALASTSSRIFVTNAAGDTPSMSTASDAAWAEIALVSGGDVRDVTVGSFDAYRHPVALNPRRLLAVRADVMDADSLAISLDGDGTVPVESTAAIASARASVKAVVLGNRVQAFLSDPYVRFSGLRVVGAVGKYFLRFSSTTLLYNSSYGFSAIVPLRIDACASDQYSVTATELSSREYSLIDQSAKVKCQKPDCVGGCLNGQCVQLTAGSTVTNTAATFACNCKMGWGGAQCDVPVIFMVVGCVVGIVFIASGFGIFRYRRRIANKVLQMQLASRDNPRIQRRWELSRILVSQALEFFDMVSDIVAFSNLLERPKDQQHGVATAYTAFFVTSMLVSLVGLCFMLETMLDVVHGRNKPMKPRRGHGGDTELTDDEYHELYTEYKQLKRHIRLLVPVMLLVAFEDVPFVCINVYILYSDFNLHLTFQASFIVSIAISCFMIGLKISRAGNFFRMILHRYELRTELKRYQKSKMSIAGRGSIALPMDGILDGSDDGDNGDGGAIGTVTTVTTIDAAGVTCADHCDSVSREAVDNCRGVRRAAADRDEPPPAYAEDHNLVNNTTAHASSAPVQPSVAKLRVFGKRASSNVNPGESEAQAAASGVGSTVSLRSTAASAPVGGGNASASAGSSDGHSAPYRQLSGSRANIGPVDGTPATGIDFTNFVANTIGGLGGR* # ORIGINAL: g9436.t1 original gene structure, not modified by PASA NODE_3439_length_3461_cov_36.866 AUGUSTUS gene 2902 3314 . - . ID=g9436;Name=g9436.t1 NODE_3439_length_3461_cov_36.866 AUGUSTUS mRNA 2902 3314 . - . ID=g9436.t1;Parent=g9436;Name=g9436.t1 NODE_3439_length_3461_cov_36.866 AUGUSTUS exon 2902 3314 . - . ID=g9436.t1.exon1;Parent=g9436.t1 NODE_3439_length_3461_cov_36.866 AUGUSTUS CDS 2902 3314 . - 2 ID=cds.g9436.t1;Parent=g9436.t1 #PROT g9436.t1 g9436 NRPILPDGVDVSLANLVWQCWAALPEDRPSFTYIREELIDLCKRTHESDVRGGGATNATSFSGYGVSSPNTFVRARMLRDGVLATHGNSEGAGVGSAAAPDTRSTQQLQLPTALSSAVSASNPMMMSSDVVIVECD* # PASA_UPDATE: g4733.t1, single gene model update, valid-1, status:[pasa:asmbl_1697,status:3], valid-1 NODE_1470_length_11096_cov_40.0022 . gene 3984 6051 . - . ID=g4733;Name=g4733.t1 NODE_1470_length_11096_cov_40.0022 . mRNA 3984 6051 . - . ID=g4733.t1;Parent=g4733;Name=g4733.t1 NODE_1470_length_11096_cov_40.0022 . five_prime_UTR 5969 6051 . - . ID=g4733.t1.utr5p1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . exon 5763 6051 . - . ID=g4733.t1.exon1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . CDS 5763 5968 . - 0 ID=cds.g4733.t1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . exon 5503 5640 . - . ID=g4733.t1.exon2;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . CDS 5503 5640 . - 1 ID=cds.g4733.t1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . exon 5051 5336 . - . ID=g4733.t1.exon3;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . CDS 5051 5336 . - 1 ID=cds.g4733.t1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . exon 3984 4751 . - . ID=g4733.t1.exon4;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . CDS 4152 4751 . - 0 ID=cds.g4733.t1;Parent=g4733.t1 NODE_1470_length_11096_cov_40.0022 . three_prime_UTR 3984 4151 . - . ID=g4733.t1.utr3p1;Parent=g4733.t1 #PROT g4733.t1 g4733 MTDLELLGFRHAAAATKADASSRVGAVVWPDVELDKDGYIEYRKGSLNSPIVITMPHGGDLKPSSVKTRTKGVVMEDFATIKVGVAMAEKLYALTGELPHVVINHLHRSKLDCNRAIVEATEDDDRAKEAYNEYHAHVLTACEMATDASIRVSPAGTAQWSILFDVHGHNHKVQRVEIGFALKGDKLRLPDAELLALGPSSTVRHLVARGNDFLTLLRGTNSLGALLEKKGYKCVPSPSEHFPTADEAYFSGGYTSIRYSKISTAHATDCIQLEHPPTIRKKGDAVIKTYAAAFGPCALKFIKAWYGVDLEKKKVAVDACASCTLSALPEYSQVCAGPTHSTSGDGASKHPAHSIIVVPVACAGTKSAVHREKKVWAVLLPVLFFLGCAAFTLIFRPEFLRGELKHRLH* # ORIGINAL: g4732.t1 original gene structure, not modified by PASA NODE_1470_length_11096_cov_40.0022 AUGUSTUS gene 237 3826 . + . ID=g4732;Name=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS mRNA 237 3826 . + . ID=g4732.t1;Parent=g4732;Name=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS exon 237 373 . + . ID=g4732.t1.exon1;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS CDS 237 373 . + 0 ID=cds.g4732.t1;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS exon 707 1418 . + . ID=g4732.t1.exon2;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS CDS 707 1418 . + 1 ID=cds.g4732.t1;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS exon 1578 2225 . + . ID=g4732.t1.exon3;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS CDS 1578 2225 . + 0 ID=cds.g4732.t1;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS exon 2456 3826 . + . ID=g4732.t1.exon4;Parent=g4732.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS CDS 2456 3826 . + 0 ID=cds.g4732.t1;Parent=g4732.t1 #PROT g4732.t1 g4732 ISNECGFYPNIHLYREVKKKDGSGQYVFQGIGADDGPWHGMDIMSRYTAKSPLQARRYIAQKAGTSYVYDIPELLRHVLRRRWNQYRTELSKASKATSAAPNAAVQAMRDHQRELQLAAAVASAVAQNADRSPRGSIDGQQQSAHATPGTPRLSRGYISELKELILDPSACGERRNSVGAPGEGCRGTIVPGLLESNREAGMNTVGMVAWKVTMVTPEYPGGRPAVIIANDMTHVIGSFGPLEDLLFQKASELARKMKIPRIYIAANSGARIGLAEEVKACFKVAWVDANEPWKGFRYLYLDPEDYKRLAEQKSVRAEIINEKGEVRYRVTDIIGAKDGLNVENLRGSGLIAGETSAAYDEIFTISLVTCRSVGIGAYLVRLGQRVIQVDGSEATGEIILTGADALNKVLGREVYTSNLQLGGTQIMHANGVTHTTVEDNLAGIAAIERWLSFVPSVTGGPVPVLACFDAPDRDVEFLPSRTPYDPRWMLAGRPSPFKKGEFELGFFDKDSFVETLAGWAQTVVCGRARLGGIPIGAIAAETRIVETLVPADPANAQSEVQVQQRAGQVWYPDSSFKTAQAIRDFQREGLPLIIFANWRGFSGGMRDMYDEVLKFGAWIVDALREYTQPVFLYIPPNGELRGGAWVVVDPTINPNHMEMYADPTSRAGVLEPEGIISVKFRRADQLRAMARLDPLFGDLHRQLASMDEHVPAATRESVMRRMQSREEELSAVYHQVAVQFADLHDGSGRMLAKGVISAAVDWRKSRRFFHWRLRRRLAECRLTKRLVDADTAVASTANALDIVRQWFLETRPGGSDDWSNDRVVAEWLEKHAAHIDDLVEQRRKSSVAAELSRLCGGDSAVAWGGVMQLLPSLTQASRSDLYARLKGLPKPSTDVAAGVAAAVKSGPTVVLNRQLSLGMSPEGVDPKAQQQQQQQQQQQQQQQAASQPSPPSETC* # ORIGINAL: g4734.t1 original gene structure, not modified by PASA NODE_1470_length_11096_cov_40.0022 AUGUSTUS gene 8887 10704 . + . ID=g4734;Name=g4734.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS mRNA 8887 10704 . + . ID=g4734.t1;Parent=g4734;Name=g4734.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS exon 8887 10704 . + . ID=g4734.t1.exon1;Parent=g4734.t1 NODE_1470_length_11096_cov_40.0022 AUGUSTUS CDS 8887 10704 . + 0 ID=cds.g4734.t1;Parent=g4734.t1 #PROT g4734.t1 g4734 MLRHAARLAVLSGTSKFRVPARRITASAVCLQRTTVGGPSSFNRDRTGPNMPGHGASRDAAESREESGRMDAKAKATDGAKGALDAAKDKVKDVASEVKETAKGRWEAVTGAAKDVASDVKAGVKEKWETISHYAAANSADTVTDKYDGVHAAGKSVDWEGRTEWDVTMDAAEETAAYARDEPKEKWEAAKDKASEATSDVKDVVKDTWEAAKGTAFGAQESVKGKWEAAKDETKEAARDAKKTVKGKWEAAKDETKEMARDAKESVKGNWEAAKDETKEAARDAKESVKGKWEAAKDETKEMARDAKESVKGKWGAAKDETKEAARDAKESVKGKWEAAKDETKEMARDAKESVKGKWEAAKDTVRGASAEASSESAHPSMGERFRSAVHAVADAAKHAPETVREFVHKAEDTSRGIVDKVIHAGEEMGDRGEGLAFGATHSYSANEEVVDAAKNVKEGVRGATKKAASTAEGVASKAQKASEDTIEAAEGWRDQMPEVSGQEAERVAFAPVTAEDAAEKEVWQDIGGNVRQGTDAQLAPDKEAWQSNAGGATSVNEGASGEPKKRNVTDRIESFTERLGRKTSSLDLNRYDHGKSMDDIDVQG* # PASA_UPDATE: g6625.t1, single gene model update, valid-1, status:[pasa:asmbl_5178,status:12], valid-1 NODE_287_length_27980_cov_40.9378 . gene 18621 20106 . + . ID=g6625;Name=g6625.t1 NODE_287_length_27980_cov_40.9378 . mRNA 18621 20106 . + . ID=g6625.t1;Parent=g6625;Name=g6625.t1 NODE_287_length_27980_cov_40.9378 . five_prime_UTR 18621 18680 . + . ID=g6625.t1.utr5p1;Parent=g6625.t1 NODE_287_length_27980_cov_40.9378 . exon 18621 18879 . + . ID=g6625.t1.exon1;Parent=g6625.t1 NODE_287_length_27980_cov_40.9378 . CDS 18681 18879 . + 0 ID=cds.g6625.t1;Parent=g6625.t1 NODE_287_length_27980_cov_40.9378 . exon 19293 20106 . + . ID=g6625.t1.exon2;Parent=g6625.t1 NODE_287_length_27980_cov_40.9378 . CDS 19293 19705 . + 2 ID=cds.g6625.t1;Parent=g6625.t1 NODE_287_length_27980_cov_40.9378 . three_prime_UTR 19706 20106 . + . ID=g6625.t1.utr3p1;Parent=g6625.t1 #PROT g6625.t1 g6625 MGAETGAARALTAACIMIAAILSATPSSAQTAILGGSVTLPALPSLIVQQESINLLITVTAGWKGSVNVSSADSAVLFSQGPGQPFTPSVLVVFAGIRDSMIFRMKPQVVQASNAVDFTVVTGPESAPVGAPYKHTLAFKSTSQADYCNYFNGINTGLYSKTVYDGTVAAAAPGDLKGPYDSVVFSGGAVYCSHRPPEFKIPQ* # ORIGINAL: g6622.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 AUGUSTUS gene 10628 12769 . + . ID=g6622;Name=g6622.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 10628 12769 . + . ID=g6622.t1;Parent=g6622;Name=g6622.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 10628 10822 . + . ID=g6622.t1.exon1;Parent=g6622.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 10628 10822 . + 0 ID=cds.g6622.t1;Parent=g6622.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 11144 12769 . + . ID=g6622.t1.exon2;Parent=g6622.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 11144 12769 . + 0 ID=cds.g6622.t1;Parent=g6622.t1 #PROT g6622.t1 g6622 MAAAVVDATECDGTFSEVDELRALLTARERDLQLAAELGKALLDSNRDLAERYDAAVADCAKRVGDLEQEVHVHKSRADTAHKSAAIVRADGEREIASLTAKLADALQRASDVERRMACDSDSQAATVARLQDELSAARMCERQLQGRVLQQFDLIAALKDELAAVHASRDDRDGALVDANARALLDRVGVLEESLHLAADAREQATHALVQVAAARDEAYAARALAHEQLCEAREEMAELRMEIAGLTTALEDARSGVNGRIDEGMSLFSEVEDRRAELERKLSAMGVQYAAAKRACDVQRRLVQSLRTQIAGLLRMGGSRADAEHCRRLEQALAQSAGEAARLADRVAQLEGGHGMGSSHAAADARRMRDFRAAFGAPAGGALGGDREAYIECLEGAVRASEVALEQCRGELRTARMTRASESAKVREAEHELHKCQVQRDQLHADIASLQLRLEEARAASLSAPSTDAAVEPMPARIAVSTAAVSSPSSARAPAVAPLNASGVANVAAVGASVPQRSEQEAHAQDHARPVLTTTSSSSASARANANAHAHGCSVPSKESALPPQDGTGGGAKENGGGAKENGGASVIRIRQSNVRRNDECAQQ* # ORIGINAL: g6623.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 AUGUSTUS gene 13213 13821 . - . ID=g6623;Name=g6623.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 13213 13821 . - . ID=g6623.t1;Parent=g6623;Name=g6623.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 13643 13821 . - . ID=g6623.t1.exon1;Parent=g6623.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 13643 13821 . - 0 ID=cds.g6623.t1;Parent=g6623.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 13213 13429 . - . ID=g6623.t1.exon2;Parent=g6623.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 13213 13429 . - 1 ID=cds.g6623.t1;Parent=g6623.t1 #PROT g6623.t1 g6623 MANEEKKIDVDLRWEDVFDDHIFSQLLAIQDEDNPTFVADVIEMYFTQADERLEEMKKMIKQKDTVPFSREAHALKGSAAGIGAKRIVEICQRLQKETPDANLDHAAELAALVERHAEARAVLKKYQNIPV* # PASA_UPDATE: g6626.t2, single gene model update, valid-1, status:[pasa:asmbl_5176,status:12], valid-1 # ORIGINAL: g6626.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 . gene 20176 23412 . - . ID=g6626;Name=g6626.t2 NODE_287_length_27980_cov_40.9378 . mRNA 20176 23412 . - . ID=g6626.t2;Parent=g6626;Name=g6626.t2 NODE_287_length_27980_cov_40.9378 . five_prime_UTR 23290 23412 . - . ID=g6626.t2.utr5p1;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 22968 23412 . - . ID=g6626.t2.exon1;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 22968 23289 . - 0 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 22701 22864 . - . ID=g6626.t2.exon2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 22701 22864 . - 2 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 22425 22583 . - . ID=g6626.t2.exon3;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 22425 22583 . - 0 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 22116 22268 . - . ID=g6626.t2.exon4;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 22116 22268 . - 0 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 21833 21984 . - . ID=g6626.t2.exon5;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 21833 21984 . - 0 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 20968 21676 . - . ID=g6626.t2.exon6;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 20968 21676 . - 1 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 20176 20747 . - . ID=g6626.t2.exon7;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . CDS 20490 20747 . - 0 ID=cds.g6626.t2;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . three_prime_UTR 20176 20489 . - . ID=g6626.t2.utr3p1;Parent=g6626.t2 NODE_287_length_27980_cov_40.9378 . mRNA 20490 23289 . - . ID=g6626.t1;Parent=g6626;Name=g6626.t2 NODE_287_length_27980_cov_40.9378 . exon 22968 23289 . - . ID=g6626.t1.exon1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 22968 23289 . - 0 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 22701 22864 . - . ID=g6626.t1.exon2;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 22701 22864 . - 2 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 22425 22583 . - . ID=g6626.t1.exon3;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 22425 22583 . - 0 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 22116 22268 . - . ID=g6626.t1.exon4;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 22116 22268 . - 0 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 21833 21984 . - . ID=g6626.t1.exon5;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 21833 21984 . - 0 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 20968 21676 . - . ID=g6626.t1.exon6;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 20968 21676 . - 1 ID=cds.g6626.t1;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . exon 20490 20750 . - . ID=g6626.t1.exon7;Parent=g6626.t1 NODE_287_length_27980_cov_40.9378 . CDS 20490 20750 . - 0 ID=cds.g6626.t1;Parent=g6626.t1 #PROT g6626.t2 g6626 MNGATGASALAKSKPAGAVGVGGKPAGEKVAKVPGAPKSPTKEKRKHDQVDAGVVGVGVAGKKDKSKGKGKDSDSSEEGDDTTEEEQQGAAHHVLLAQDHGRKLKDPNTIVWTQDDGIILERLRYITRFTEHEPSLKWEGFVWNNEWTAEKIKERWNKIARTVRTQRGQFSFGEAVARVWQHYQEAMGQGRVLMGEEYEEFKANGGRRLKKKKKKDPEAPKRPDTAYMIFTRQKREELKDSMKGAPMTEVMKKLAELWRSLPPTNKSKYEKKAEKLKAAYMQHKQEYLLTHPKPKKGDGFDGSGRKRKRDDGKRRARTGNQIWKDEYTPVLRQTRPELTFGDLQIELGKIWKELPEERKKPYMDRAAVERDQIRREEEAAAAAVAFDPAGMDIFGPGFPPGTANPQYIFHPSSVLVTQYAHPQAYATAGGSEKPAKKRAKKDPNAPKPPLKTAYLLWASQFRPTLTEQQPLLSFEDISRQLGVAWKSLSEHERNSWEERLKQEREKYIRDFSEYVRTLPEGDRARALREAQEGEKEAKKKAKKAAAAAAVYAQPSPNAGGLGSLPMQVQVQQMPMAMGVPPAVQASKKKTVLPATQNQILPQMPVPIDMQSLGNPAVAAMQKTKQKNKGQAQQMGVDF* #PROT g6626.t1 g6626 MNGATGASALAKSKPAGAVGVGGKPAGEKVAKVPGAPKSPTKEKRKHDQVDAGVVGVGVAGKKDKSKGKGKDSDSSEEGDDTTEEEQQGAAHHVLLAQDHGRKLKDPNTIVWTQDDGIILERLRYITRFTEHEPSLKWEGFVWNNEWTAEKIKERWNKIARTVRTQRGQFSFGEAVARVWQHYQEAMGQGRVLMGEEYEEFKANGGRRLKKKKKKDPEAPKRPDTAYMIFTRQKREELKDSMKGAPMTEVMKKLAELWRSLPPTNKSKYEKKAEKLKAAYMQHKQEYLLTHPKPKKGDGFDGSGRKRKRDDGKRRARTGNQIWKDEYTPVLRQTRPELTFGDLQIELGKIWKELPEERKKPYMDRAAVERDQIRREEEAAAAAVAFDPAGMDIFGPGFPPGTANPQYIFHPSSVLVTQYAHPQAYATAGGSEKPAKKRAKKDPNAPKPPLKTAYLLWASQFRPTLTEQQPLLSFEDISRQLGVAWKSLSEHERNSWEERLKQEREKYIRDFSEYVRTLPEGDRARALREAQEGEKEAKKKAKKAAAAAAVYAQQPSPNAGGLGSLPMQVQVQQMPMAMGVPPAVQASKKKTVLPATQNQILPQMPVPIDMQSLGNPAVAAMQKTKQKNKGQAQQMGVDF* # PASA_UPDATE: g6621.t1, single gene model update, valid-1, status:[pasa:asmbl_5173,status:12],[pasa:asmbl_5175,status:12], valid-1 NODE_287_length_27980_cov_40.9378 . gene 7251 9560 . - . ID=g6621;Name=g6621.t1 NODE_287_length_27980_cov_40.9378 . mRNA 7251 9560 . - . ID=g6621.t1;Parent=g6621;Name=g6621.t1 NODE_287_length_27980_cov_40.9378 . exon 9450 9560 . - . ID=g6621.t1.exon1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . CDS 9450 9560 . - 0 ID=cds.g6621.t1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . exon 8850 9010 . - . ID=g6621.t1.exon2;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . CDS 8850 9010 . - 0 ID=cds.g6621.t1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . exon 8446 8601 . - . ID=g6621.t1.exon3;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . CDS 8446 8601 . - 1 ID=cds.g6621.t1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . exon 7936 8146 . - . ID=g6621.t1.exon4;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . CDS 7936 8146 . - 1 ID=cds.g6621.t1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . exon 7251 7814 . - . ID=g6621.t1.exon5;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . CDS 7533 7814 . - 0 ID=cds.g6621.t1;Parent=g6621.t1 NODE_287_length_27980_cov_40.9378 . three_prime_UTR 7251 7532 . - . ID=g6621.t1.utr3p1;Parent=g6621.t1 #PROT g6621.t1 g6621 MAQESKAEWELVTIFFFHGVGGSFLTWREQLEHFSGQGFRVICPELFGHGGSTGKGGRAGYTFHELAADMLAAFDHYRKNSSNIIVGHSYGTAFAAYLARERSQYIERVVLVSGGAPCPLGGPKVGMWSMPGPLLACMSPMLRYSYKRLAFSPNAPRHLVRSDPVMAMSAMVLRRVMLGQVWSEGDEWYHSRIRIPVLLVYGESDRLVTLDDEKWMQSTIAESQLEVIANAGHMVMLEQPEAVNRAILRFIAGVEVAATTTAATRKISTASASEKARISSSGRTSSQASIQSKQSTRTKSFTSVAE* # ORIGINAL: g6627.t2 original gene structure, not modified by PASA # ORIGINAL: g6627.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 AUGUSTUS gene 24416 27087 . + . ID=g6627;Name=g6627.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 24416 27087 . + . ID=g6627.t2;Parent=g6627;Name=g6627.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 24416 24984 . + . ID=g6627.t2.exon1;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 24416 24984 . + 0 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 25080 25278 . + . ID=g6627.t2.exon2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 25080 25278 . + 1 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 25392 25557 . + . ID=g6627.t2.exon3;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 25392 25557 . + 0 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 25724 25773 . + . ID=g6627.t2.exon4;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 25724 25773 . + 2 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 26106 26207 . + . ID=g6627.t2.exon5;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 26106 26207 . + 0 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 26582 26644 . + . ID=g6627.t2.exon6;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 26582 26644 . + 0 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 26773 27087 . + . ID=g6627.t2.exon7;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 26773 27087 . + 0 ID=cds.g6627.t2;Parent=g6627.t2 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 24416 24988 . + . ID=g6627.t1;Parent=g6627;Name=g6627.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 24416 24988 . + . ID=g6627.t1.exon1;Parent=g6627.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 24416 24988 . + 0 ID=cds.g6627.t1;Parent=g6627.t1 #PROT g6627.t2 g6627 MSRVGSSRRDPALERTFRGHKDSVTAVDFNPNMKQLATSSMDGSVMVWNFKPQMRAFRFVGHKGAVQSVRFSPTGQILASGARDNTVRLWIPSVRGESTVFKAHSATVRSVAFSRNGRQLVTASDDKTVKVWSVDRQRFQYTLQGHSNWVRCAEFSPDGRLIVSSGDDKTVRLWDAESHTCVHTFTDHSGMVNSAAFHPDGTCIASCSTDHTIKLWDVRTMRLLQHYQAHGDTVNSVAFHPSGNFLISSSNDSTLKVWDLLEGHLLYTLHGHQNAATCARFSARGDYFASGGADNGVLVWRTNFDANDSDEVLGGGRDYEDVRPDGLRPPSGAAHVRDTVHRQPPVVNVGAALFQDPISAPEGAFYNDEGDDGPVTRRLAPRQYSDEISDKLSAILGQLDVLTNTVGILERRVSLTEDKVAELLFDPRRVRLQVRRHDDRDEHADRDDADHYAHHAAEGSSAHADTGFASHDVDSAGKGKAGAGASR* #PROT g6627.t1 g6627 MSRVGSSRRDPALERTFRGHKDSVTAVDFNPNMKQLATSSMDGSVMVWNFKPQMRAFRFVGHKGAVQSVRFSPTGQILASGARDNTVRLWIPSVRGESTVFKAHSATVRSVAFSRNGRQLVTASDDKTVKVWSVDRQRFQYTLQGHSNWVRCAEFSPDGRLIVSSGDDKTVRLWDAESHTCVHTFTDHSG* # ORIGINAL: g6624.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 AUGUSTUS gene 14695 18209 . - . ID=g6624;Name=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 14695 18209 . - . ID=g6624.t1;Parent=g6624;Name=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 17529 18209 . - . ID=g6624.t1.exon1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 17529 18209 . - 0 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 16498 17185 . - . ID=g6624.t1.exon2;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 16498 17185 . - 0 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 16119 16250 . - . ID=g6624.t1.exon3;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 16119 16250 . - 2 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 15685 15815 . - . ID=g6624.t1.exon4;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 15685 15815 . - 2 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 15437 15519 . - . ID=g6624.t1.exon5;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 15437 15519 . - 0 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 15230 15283 . - . ID=g6624.t1.exon6;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 15230 15283 . - 1 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 14852 14907 . - . ID=g6624.t1.exon7;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 14852 14907 . - 1 ID=cds.g6624.t1;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 14695 14756 . - . ID=g6624.t1.exon8;Parent=g6624.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 14695 14756 . - 2 ID=cds.g6624.t1;Parent=g6624.t1 #PROT g6624.t1 g6624 MAAAAVKRVLSAPFRRRSAAKEKEWTQLTDDAPRDDPRDSVSYRTHDSLEHFRIRVVLRRATAAQAPLRKQREGEGDDGASDEGEDGENEGGEGGEGGEGGQQAARQRRRRQQRRGNAEDSGEAGEAASRDVLLTVGWQEKVFGRDELRQYADPASCADDPLAAKHCAQVATLVSEGSPHLSASRGAGGVLFTYVDADDFVSENEYTREVTNSVDTAPATLIENVIQARRRHGDGHLRLNDGQPVRVVPRGIRAHHVPDTACQAMHIMVDLAAASAFGGDSNGDDRASVGAEGPPDVRVLCSLVADAKGVITMRPDFSRDGSPYRIESLMHDVFEFRLENASRAQDRAAQEREREVYRELYHRHADLLANRVGTEFVREPDLDATRVWVLGEIVWAKGFDSDGVYVHYALELPRPWSLPDADQPLAAVSAVGNRGGSTGAAVIALPFEWELLCAATAGSASSAAGGPVPFPRVYLQVVSLDGWDRYRVEGYGYFEIPDNAGSTTVEVSMWRPIGSADQMTRRFFVGGAPELEDISYTAVPPDFTGRHLSKLGFRTVTTGTVCVRLNTVHQSSRLSQSTRAVQSQFERAFGRLSLDGASAEYKSTAAVLEAFARARKRLEQQRSGTKTE* # ORIGINAL: g6620.t1 original gene structure, not modified by PASA NODE_287_length_27980_cov_40.9378 AUGUSTUS gene 3320 6796 . - . ID=g6620;Name=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS mRNA 3320 6796 . - . ID=g6620.t1;Parent=g6620;Name=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 6744 6796 . - . ID=g6620.t1.exon1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 6744 6796 . - 0 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 6462 6564 . - . ID=g6620.t1.exon2;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 6462 6564 . - 1 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 6248 6324 . - . ID=g6620.t1.exon3;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 6248 6324 . - 0 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 5836 5923 . - . ID=g6620.t1.exon4;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 5836 5923 . - 1 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 5553 5676 . - . ID=g6620.t1.exon5;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 5553 5676 . - 0 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 5293 5418 . - . ID=g6620.t1.exon6;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 5293 5418 . - 2 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 5044 5148 . - . ID=g6620.t1.exon7;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 5044 5148 . - 2 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 4702 4894 . - . ID=g6620.t1.exon8;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 4702 4894 . - 2 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 4459 4533 . - . ID=g6620.t1.exon9;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 4459 4533 . - 1 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 4185 4338 . - . ID=g6620.t1.exon10;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 4185 4338 . - 1 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 3896 4063 . - . ID=g6620.t1.exon11;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 3896 4063 . - 0 ID=cds.g6620.t1;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS exon 3320 3793 . - . ID=g6620.t1.exon12;Parent=g6620.t1 NODE_287_length_27980_cov_40.9378 AUGUSTUS CDS 3320 3793 . - 0 ID=cds.g6620.t1;Parent=g6620.t1 #PROT g6620.t1 g6620 MGAAELLVALSRRRLLLGALLYVAGIAWTLSLAADWNTRRSYLSENALGVGKITAIYDRANADQAKKWSRELNATIPSARRQWLQKAITSVGAEPYEFAYGGGINIEVRLASYAVLRAPKGDGTESVAIVAGRPQDVPFVLSLVSVLQASADSLAKDVVAILPLDADDEGSARRVCAAWLQAYVSPDWGRGSGQGLQGRAGALQAAFIVEAPSVSSGFAAVEFFTEGPFGRLPNLDIVNAASALSLQHGVRVVQHGIGADATAGEQIVSALLMLCRLAVGGCGAHGPFLGWQIDAFTLRAVETPGAMHRPELYGRIVEGTLRSANNLLERLHQSFFLYVLPGPGRFVSIAHYIPATTLFVVGLLVVAVGAWIALPREATYGTLRTAHSEVSQSVAEPIGRFGLSVICAAGASAAPSFPSWGMVESGVAACTLAALLLAGCLALLRKAGEIAHYESAVLACVACAYAAAGLLALSVVHFASALVVGAVAVPACLCLAAACDRHSPWLAAGAAALAWPVFTLCALSVGATCLGCTAETHGITSRGIWMPAVMVLWPVHAAAVAAWARAGHPQSHEKCVKIE* # PASA_UPDATE: g6619.t1, single gene model update, valid-1, status:[pasa:asmbl_5177,status:12], valid-1 NODE_287_length_27980_cov_40.9378 . gene 413 3280 . + . ID=g6619;Name=g6619.t1 NODE_287_length_27980_cov_40.9378 . mRNA 413 3280 . + . ID=g6619.t1;Parent=g6619;Name=g6619.t1 NODE_287_length_27980_cov_40.9378 . five_prime_UTR 413 414 . + . ID=g6619.t1.utr5p1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . exon 413 540 . + . ID=g6619.t1.exon1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . CDS 415 540 . + 0 ID=cds.g6619.t1;Parent=g6619.t1;5_prime_partial=true NODE_287_length_27980_cov_40.9378 . exon 649 735 . + . ID=g6619.t1.exon2;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . CDS 649 735 . + 0 ID=cds.g6619.t1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . exon 918 954 . + . ID=g6619.t1.exon3;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . CDS 918 954 . + 0 ID=cds.g6619.t1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . exon 1114 1284 . + . ID=g6619.t1.exon4;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . CDS 1114 1284 . + 2 ID=cds.g6619.t1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . exon 1524 3280 . + . ID=g6619.t1.exon5;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . CDS 1524 3082 . + 2 ID=cds.g6619.t1;Parent=g6619.t1 NODE_287_length_27980_cov_40.9378 . three_prime_UTR 3083 3280 . + . ID=g6619.t1.utr3p1;Parent=g6619.t1 #PROT g6619.t1 g6619 ELFDYIVARHRLNEKEARKFIRQMISAIHYCHKNGIVHRDLKLENLLLDKNGNIKITDFGFSAMYRPGQLMTTFVGSPAYAAPEIIANEQYIGPSADIWSLGVIMFTLITGRMPFNDENQATCLEAILNAKYEVPDTVSADARNLIESILKRRPHERLSLQDIRQHSWVCSGGDGSQTTDYLPSAAMVDPEVLSKLARLGMDVATVEADLRANFVTRFTASYHLMTDKIAREKEESAKDDEIRAIAEQLAAKYAGPNMRMSLTPGPVRRPRTMSVGVDTAPRPLSLPQGIAGQLNSPLGAGSMKQVATRSATSEGGMFSRALLSPATDHSGSLNKRRQRSNTVDAPRNVDDIVASARRKAQGATLPMTSSPLAAGAAGAGILDVRSRTPSASEEEHTTSASISSAMTGHEDSEPSSPPSADQQGRRDEEGKETPGLQRKKSHKLFWLRKTKPRASLTDMSTGSDDAGMTSSRDDILLPELNPAHIHDMGHAATLTFPRIGSSPKSQRSRSPFAGRRMKTAIDGISDGMARIFGLTKRTSVGRSVSVTSPPHASGERESDARILENVAVFNHLTTSSKNVKDLTREVGRVLTANKVRHTVAGYIIHCEMGLGPSDLLVWEMEICRLAQLDRLHGIKFRRIGGDMWTYKNTIDSLVQQMKL* # ORIGINAL: g8699.t1 original gene structure, not modified by PASA NODE_2679_length_5467_cov_34.5547 AUGUSTUS gene 142 5262 . + . ID=g8699;Name=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS mRNA 142 5262 . + . ID=g8699.t1;Parent=g8699;Name=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 142 322 . + . ID=g8699.t1.exon1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 142 322 . + 0 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 572 769 . + . ID=g8699.t1.exon2;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 572 769 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 1030 1212 . + . ID=g8699.t1.exon3;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 1030 1212 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 1368 1568 . + . ID=g8699.t1.exon4;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 1368 1568 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 1767 1982 . + . ID=g8699.t1.exon5;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 1767 1982 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 2243 2443 . + . ID=g8699.t1.exon6;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 2243 2443 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 2570 2688 . + . ID=g8699.t1.exon7;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 2570 2688 . + 2 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 2936 3723 . + . ID=g8699.t1.exon8;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 2936 3723 . + 0 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 4088 4147 . + . ID=g8699.t1.exon9;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 4088 4147 . + 1 ID=cds.g8699.t1;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS exon 4362 5262 . + . ID=g8699.t1.exon10;Parent=g8699.t1 NODE_2679_length_5467_cov_34.5547 AUGUSTUS CDS 4362 5262 . + 1 ID=cds.g8699.t1;Parent=g8699.t1 #PROT g8699.t1 g8699 MCPGTTEVPCTTGTYQDQTGSASCISCPANATTLSTGSTRFADCICADGYFMNTASKTCVACNQGSFCKGGISTLCPPKSYQPSRGKSSCISCPDANTSTNQGATALADCLCISGFYKPDGQSTCVACPTGATCTGGLTSCSAGQYLSSGNCFVCSPTTATPTTLPECKCPEGRYINGTNIATDFCVLCPLGASCSNGAFAQCDRGSFSDRTGAASCTQCNSAGTMTTATKGSTARSACLCIGGYYMDNNGLCLECPRGSACRGSPSLPIACVSPNYAPTTKIASCTFNVCGSGFIASPDINGPPNQGTTRCRCVDGQKPVLGACVACSPGEYCTLGDATKCPIGSYQALTAQTTCSHCGDGMTTSDVGATAASMCVCSLAGFWNSTTTGKCEACPAGYACTGGGTRTLCPSEKYQPNYGQSLCLNCPAANFKIVNTDKTDCACRTGFVPLGSDTCVCALNPSAKSVDECNAATTIVFPIVTSSSSPVVSTTLTSATTTVIARPSSTGVRAPTASASAAAVTTAAVVPASTQITPQSSVVPPAQSSATISAVAPTVTGGVDASSTVGGGGGGGVTAQTSQTVPPTQTDGGGGGGGGSGGVTDTTSQAVPPTQTDGGGGGGGGGGGGDGGGVTDTTSQAVVPTQTDGGGSNNNGGSNGGDVSASEGGGGGGLPIAALAGGAAGAVAVIGLLALLVVREDFVRRSRQGVVELTELTDWKAPTKPVVMGSMRPSESIDSISVAYVSGGPHGQKMRLSANPVYEETGHYAALAPKSRPATGVAKGGAADGNYAQPSENTYARPSDYATANYAQPKGGANYAQPEDRNSYAQPQKGDLYASPQESTYATAEQVLGQPYAMPQLGGDLYAQPQSGSSSYAQPQSGPSYAQPQSESSYAQPQSGSSYAQPQSGSSYAQPQSGSSYAQPQSGSSYAQPQSGASYAQPQSGSSSFAQPQVAGDAYAAPHGRQPDHYLVASGNNDPVAYATPAKAAKTAPIDLYAFTPEPSQYASPQDRPGSSRA* # ORIGINAL: g2451.t1 original gene structure, not modified by PASA NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS gene 152 2212 . + . ID=g2451;Name=g2451.t1 NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS mRNA 152 2212 . + . ID=g2451.t1;Parent=g2451;Name=g2451.t1 NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS exon 152 1230 . + . ID=g2451.t1.exon1;Parent=g2451.t1 NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS CDS 152 1230 . + 0 ID=cds.g2451.t1;Parent=g2451.t1 NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS exon 1711 2212 . + . ID=g2451.t1.exon2;Parent=g2451.t1 NODE_3061_length_4431_cov_37.3829_potentialcontaminant AUGUSTUS CDS 1711 2212 . + 1 ID=cds.g2451.t1;Parent=g2451.t1 #PROT g2451.t1 g2451 MSLSNIPVEILEQHIASLLSNKDLVSLAHVNSQLHRLLKKKCCFTLKDAERFHESAKFRAAVLAIIPKDRLVLRLRNFDIENVSLLAGVHSLVLSNCQGFTDVSALGGVHSVGLYNCRGVTDVSALGGVHSLNLARCRGVTDVSALGSVHTLDLSDCQEVTDVSALGGVHSLYLARCRKVTDVSTLGSVHSLSLARCRKVTDVSTLGSVHSLVISDCQGVTDVSALGSVHSLVLSDCKGVTDVSALGGVHSLDLSDCQGVTDVSALGGVHTLNLSDCQGVTDVSALGSVHSLIISDCKGITDVSALGSVHSLILSDCQAVVSALGSVHFLNLAHCEGVTDMSAMGSVYSLNLARCNKEVTVHSLVLSDRQGVTDVSALGGVHSLNLARCRGVTDVSKLGSVHTLDLSECQGVADVSALGGVRSLNLARCRGVTDVSTLGSVHTLDLSDCQGVTDVSALGGVHSLNLARCRGVTDVSTLGSVHTLDLSDCNGVTDASMLDGVHTLNLARCGVLNTLASLGYSTYTWW* # PASA_UPDATE: g12195.t1, single gene model update, valid-1, status:[pasa:asmbl_7147,status:12], valid-1 NODE_4257_length_1922_cov_39.8912 . gene 113 1636 . - . ID=g12195;Name=g12195.t1 NODE_4257_length_1922_cov_39.8912 . mRNA 113 1636 . - . ID=g12195.t1;Parent=g12195;Name=g12195.t1 NODE_4257_length_1922_cov_39.8912 . exon 1631 1636 . - . ID=g12195.t1.exon1;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . CDS 1631 1636 . - 0 ID=cds.g12195.t1;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . exon 1388 1498 . - . ID=g12195.t1.exon2;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . CDS 1388 1498 . - 0 ID=cds.g12195.t1;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . exon 453 1116 . - . ID=g12195.t1.exon3;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . CDS 453 1116 . - 0 ID=cds.g12195.t1;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . exon 113 208 . - . ID=g12195.t1.exon4;Parent=g12195.t1 NODE_4257_length_1922_cov_39.8912 . CDS 113 208 . - 2 ID=cds.g12195.t1;Parent=g12195.t1;3_prime_partial=true #PROT g12195.t1 g12195 MAAPTVKVQEAKDLTRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQSAARRAAGVILEMIREQKIAGRAVLIAGQPGTGKTAIAMGMAQALGQDTPFTMIAGSEIFSLEMSKTEALTQAFRQSIGVRIKEETEIIEGEVVEIQIDRPATGSGQKVGKLTLKTTEMETIYDLGQKMIDSLTKEKVTAGDVITIDKATGKITKLGRSFARARDYDAMGAQTRFVQCPEGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDIGEIKPEVREQIDSKVAEWREEGKAEIVPG # PASA_UPDATE: g9049.t1, single gene model update, valid-1, status:[pasa:asmbl_5644,status:12], valid-1 NODE_3159_length_4150_cov_38.2923 . gene 194 1884 . + . ID=g9049;Name=g9049.t1 NODE_3159_length_4150_cov_38.2923 . mRNA 194 1884 . + . ID=g9049.t1;Parent=g9049;Name=g9049.t1 NODE_3159_length_4150_cov_38.2923 . five_prime_UTR 194 195 . + . ID=g9049.t1.utr5p1;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . exon 194 322 . + . ID=g9049.t1.exon1;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . CDS 196 322 . + 0 ID=cds.g9049.t1;Parent=g9049.t1;5_prime_partial=true NODE_3159_length_4150_cov_38.2923 . exon 621 766 . + . ID=g9049.t1.exon2;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . CDS 621 766 . + 2 ID=cds.g9049.t1;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . exon 873 1096 . + . ID=g9049.t1.exon3;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . CDS 873 1096 . + 0 ID=cds.g9049.t1;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . exon 1456 1884 . + . ID=g9049.t1.exon4;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . CDS 1456 1693 . + 1 ID=cds.g9049.t1;Parent=g9049.t1 NODE_3159_length_4150_cov_38.2923 . three_prime_UTR 1694 1884 . + . ID=g9049.t1.utr3p1;Parent=g9049.t1 #PROT g9049.t1 g9049 AGKDLQPGREGGTWLGVTRTGRFAALTNFREPLDNQPEVKGRGMLVSDFLQSTQDTPLEYAGRIAASASEYAGFNLIIGDFSQLNSEGIPSVAYVSNRSHPPFKELGANSYGLCNATLDIPWPKVSEGRHRFCEIIRTHTAAEGDALKDAPILVGDLLALMADKKTYADDLLPATGVGIEWERKLSGLFVTIPEAKYGTRATSVLIVLADGTAHFCERSLDPTGSVGEWKDNAFVLTPGNGHLR* # PASA_UPDATE: g9050.t1, single gene model update, valid-1, status:[pasa:asmbl_5643,status:12], valid-1 NODE_3159_length_4150_cov_38.2923 . gene 2043 3736 . - . ID=g9050;Name=g9050.t1 NODE_3159_length_4150_cov_38.2923 . mRNA 2043 3736 . - . ID=g9050.t1;Parent=g9050;Name=g9050.t1 NODE_3159_length_4150_cov_38.2923 . exon 2043 3736 . - . ID=g9050.t1.exon1;Parent=g9050.t1 NODE_3159_length_4150_cov_38.2923 . CDS 2249 3736 . - 0 ID=cds.g9050.t1;Parent=g9050.t1 NODE_3159_length_4150_cov_38.2923 . three_prime_UTR 2043 2248 . - . ID=g9050.t1.utr3p1;Parent=g9050.t1 #PROT g9050.t1 g9050 MGVSRVGQSLLADAEIVLCRDLLEHGHIPSLLAGTERYAAMLASDYAQNARASGMFRFCLNTLAKYTLFRGNDGAKGESNSAACMQLLASIVDRAEKYEQGYERRKLSTSLESNSSDSGGADLARIASIWEHPGRGARPSVVRACVKVIVSHYSQPHNALRFRELFRLALGVEGALSLPTPTRASLNPPPHDAREVLSVSPSRRAVGLRASVDRPTSTRRRILPPILSAVPDQDAVSNDACRHGSVEADPTVGPMPQLSAPASAFLKTTKCTLPLLAVAASFVASLGSVYEASLWGQSEGCATASMCAATLLRSQWVSRSLLSSLDTDRLAQVRDVLMDAAADVEDDLRGILSIAALPPPGAPLLDDLHSIVSSTLLTVSKVRSQRLLLSRGGMLRKGAVDMFAGVPSPPSMPRPPRRPASRAELRSASRSRTMTGPAGLVSVDMSGLVSVHQSSSVPLARLRRMVPIRSMTGPSRPLTSLGMADEWHTRSAFAM* # ORIGINAL: g2729.t1 original gene structure, not modified by PASA NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS gene 2 593 . + . ID=g2729;Name=g2729.t1 NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS mRNA 2 593 . + . ID=g2729.t1;Parent=g2729;Name=g2729.t1 NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS exon 2 249 . + . ID=g2729.t1.exon1;Parent=g2729.t1 NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS CDS 2 249 . + 1 ID=cds.g2729.t1;Parent=g2729.t1 NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS exon 439 593 . + . ID=g2729.t1.exon2;Parent=g2729.t1 NODE_6221_length_614_cov_44.462_potentialcontaminant AUGUSTUS CDS 439 593 . + 2 ID=cds.g2729.t1;Parent=g2729.t1 #PROT g2729.t1 g2729 ARVTISPRSQSTQGLDFNFAETNLTWAMNDSSNKTVSIRLIDDARYEASEHIIFRLWQYSSVDNGWRVVQLHKMNVLDNGDAGTVRFERTRFDVLESAGTLYIVVKRVNGSSGAAHVSIAVSAGSTANSTRCV* # PASA_UPDATE: g14471.t1, single gene model update, valid-1, status:[pasa:asmbl_8805,status:12], valid-1 NODE_673_length_19253_cov_42.1248 . gene 16705 19253 . + . ID=g14471;Name=g14471.t1 NODE_673_length_19253_cov_42.1248 . mRNA 16705 19253 . + . ID=g14471.t1;Parent=g14471;Name=g14471.t1 NODE_673_length_19253_cov_42.1248 . five_prime_UTR 16705 16837 . + . ID=g14471.t1.utr5p1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . five_prime_UTR 16940 16986 . + . ID=g14471.t1.utr5p2;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 16705 16837 . + . ID=g14471.t1.exon1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 16940 17055 . + . ID=g14471.t1.exon2;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 16987 17055 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 17220 17324 . + . ID=g14471.t1.exon3;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 17220 17324 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 17417 17463 . + . ID=g14471.t1.exon4;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 17417 17463 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 17612 17705 . + . ID=g14471.t1.exon5;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 17612 17705 . + 1 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 17972 18043 . + . ID=g14471.t1.exon6;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 17972 18043 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 18255 18366 . + . ID=g14471.t1.exon7;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 18255 18366 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 18603 18712 . + . ID=g14471.t1.exon8;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 18603 18712 . + 2 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . exon 19114 19253 . + . ID=g14471.t1.exon9;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . CDS 19114 19164 . + 0 ID=cds.g14471.t1;Parent=g14471.t1 NODE_673_length_19253_cov_42.1248 . three_prime_UTR 19165 19253 . + . ID=g14471.t1.utr3p1;Parent=g14471.t1 #PROT g14471.t1 g14471 MNRLFGSGKPKQPPPTLTDAISSTDARGESIEKKIQKLDVELKKYKDQMAKMREGPGKNQLKQRAMRVLKQKRMYEAQRDQLMQQSFNMEQANFATQTLKDTITTVDAMKIGVKEMKKQFKNVDIDKIEDIQDEMEYMLDQANEIQESLSRSYGIGDDIDDADLEAEFDALGEEIADSDASYLDEATSAPSAPTAEPTSDSKKDVKVDEFGLPEVPLTI* # PASA_UPDATE: g14468.t1, single gene model update, valid-1, status:[pasa:asmbl_8802,status:3], valid-1 NODE_673_length_19253_cov_42.1248 . gene 3101 9203 . - . ID=g14468;Name=g14468.t1 NODE_673_length_19253_cov_42.1248 . mRNA 3101 9203 . - . ID=g14468.t1;Parent=g14468;Name=g14468.t1 NODE_673_length_19253_cov_42.1248 . five_prime_UTR 9023 9203 . - . ID=g14468.t1.utr5p1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 8954 9203 . - . ID=g14468.t1.exon1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 8954 9022 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 8576 8707 . - . ID=g14468.t1.exon2;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 8576 8707 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 8333 8453 . - . ID=g14468.t1.exon3;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 8333 8453 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 8030 8095 . - . ID=g14468.t1.exon4;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 8030 8095 . - 2 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 7574 7651 . - . ID=g14468.t1.exon5;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 7574 7651 . - 2 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 7307 7380 . - . ID=g14468.t1.exon6;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 7307 7380 . - 2 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 6905 6957 . - . ID=g14468.t1.exon7;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 6905 6957 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 6546 6749 . - . ID=g14468.t1.exon8;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 6546 6749 . - 1 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 6075 6267 . - . ID=g14468.t1.exon9;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 6075 6267 . - 1 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 5712 5801 . - . ID=g14468.t1.exon10;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 5712 5801 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 4976 5395 . - . ID=g14468.t1.exon11;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 4976 5395 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 4578 4747 . - . ID=g14468.t1.exon12;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 4578 4747 . - 0 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 4270 4359 . - . ID=g14468.t1.exon13;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 4270 4359 . - 1 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . exon 3101 4159 . - . ID=g14468.t1.exon14;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . CDS 4126 4159 . - 1 ID=cds.g14468.t1;Parent=g14468.t1 NODE_673_length_19253_cov_42.1248 . three_prime_UTR 3101 4125 . - . ID=g14468.t1.utr3p1;Parent=g14468.t1 #PROT g14468.t1 g14468 MAEAAASDFEALIKRHIADNKVAIFSKTTCPYCKKVKALFDSLGQQYGTIELDLIPDGPAVQATLEKVSGQRTVPNVFVGGTHVGGCDATLKANDEGTLAKLLGIEAVSYEFDLVVIGGGSGGLACAKQAASHGKKVACLDFVTPTPIGTTWGLGGTCVNVGCIPKKLMHTAALHGEHLEDAKAYGWDVDKEKITHRWDAMVQGVQDHIGSLNWGYRVALRDKKVEYINGLGAFSDPHTVVATMRNGKTRTLTTASVVIAVGGRPKYPGIPGDTECCITSDDLFSLDHAPGKTLVVGASYVALECAGFLAAFGYDTTVMARSIFLRGFDQDIAERIVEYMGNHKTKFIRGAVPSKFEKIPYEDGKTRIKATWVRSNGEEESDHYDTVILAIGRYPLTQQLGLDRAGVAVDAVTGKIPADAAERTNVRHIYAIGDILLGRPELTPVAIQAGKLLADRLYAGKTTLTDYEKIPTTVFTPLEYGCIGLAEEDALKKYGEENIETYLMNFKPLEWTVAHREDNACYMKLICNKADEDRVVGLHVLAPNAGEITQGYAVGIRLGATKADFDATIGIHPTNSENFTTLSITRSSGEDATATGC* # PASA_UPDATE: g14467.t1, single gene model update, valid-1, status:[pasa:asmbl_8804,status:12], valid-1 NODE_673_length_19253_cov_42.1248 . gene 133 2613 . + . ID=g14467;Name=g14467.t1 NODE_673_length_19253_cov_42.1248 . mRNA 133 2613 . + . ID=g14467.t1;Parent=g14467;Name=g14467.t1 NODE_673_length_19253_cov_42.1248 . five_prime_UTR 133 133 . + . ID=g14467.t1.utr5p1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 133 300 . + . ID=g14467.t1.exon1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 134 300 . + 0 ID=cds.g14467.t1;Parent=g14467.t1;5_prime_partial=true NODE_673_length_19253_cov_42.1248 . exon 550 639 . + . ID=g14467.t1.exon2;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 550 639 . + 1 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 927 1113 . + . ID=g14467.t1.exon3;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 927 1113 . + 1 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 1251 1376 . + . ID=g14467.t1.exon4;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 1251 1376 . + 0 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 1681 1782 . + . ID=g14467.t1.exon5;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 1681 1782 . + 0 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 2145 2240 . + . ID=g14467.t1.exon6;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 2145 2240 . + 0 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . exon 2367 2613 . + . ID=g14467.t1.exon7;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . CDS 2367 2588 . + 0 ID=cds.g14467.t1;Parent=g14467.t1 NODE_673_length_19253_cov_42.1248 . three_prime_UTR 2589 2613 . + . ID=g14467.t1.utr3p1;Parent=g14467.t1 #PROT g14467.t1 g14467 PTFIVALRADMDGLRMTEANPHLAYRSQVDGLAHMCGHDGHMASLVGAALIIADMRHKLPSSRGVRLLFQPAEENPGGALPMIKEGCLDGVDEIYGFHNWPSVPLGQLAVIPGPVMAHVTEFALTVTGKGGHASQPNMCIDPVICSAHIITAAQTVISRNVASADNAVLSITMVHGGEANNVIPDSVVIKGTIRDLSDSVSKTINTRFEKIATGTAETFGCKAKLVYDPMYPVLINAPVETEHVIRIAKKTLGDDKVTGKGLPLMGAEDFAYFLQERPGCFFFLGGGEDGRNNSICHGTDFDFNDKILPTALRMWVRLVEDRLGAALFE* # ORIGINAL: g14470.t1 original gene structure, not modified by PASA NODE_673_length_19253_cov_42.1248 AUGUSTUS gene 15557 16119 . + . ID=g14470;Name=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS mRNA 15557 16119 . + . ID=g14470.t1;Parent=g14470;Name=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS exon 15557 15633 . + . ID=g14470.t1.exon1;Parent=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS CDS 15557 15633 . + 0 ID=cds.g14470.t1;Parent=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS exon 15733 15836 . + . ID=g14470.t1.exon2;Parent=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS CDS 15733 15836 . + 1 ID=cds.g14470.t1;Parent=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS exon 15968 16119 . + . ID=g14470.t1.exon3;Parent=g14470.t1 NODE_673_length_19253_cov_42.1248 AUGUSTUS CDS 15968 16119 . + 2 ID=cds.g14470.t1;Parent=g14470.t1 #PROT g14470.t1 g14470 MASDVSASSSSAPSDERTYKGWDVIRFMPKDVISRMIQFTIAMFLVPLGSYFGARDLLFEGFLGYDNGSVPASIVAVVMVQVVLGVCVWIAYSEGDESSAAPSDDSRKRK* # PASA_UPDATE: g14469.t1, single gene model update, valid-1, status:[pasa:asmbl_8801,status:12],[pasa:asmbl_8803,status:12], valid-1 NODE_673_length_19253_cov_42.1248 . gene 9479 15013 . - . ID=g14469;Name=g14469.t1 NODE_673_length_19253_cov_42.1248 . mRNA 9479 15013 . - . ID=g14469.t1;Parent=g14469;Name=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 14978 15013 . - . ID=g14469.t1.exon1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 14978 15013 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 14041 14820 . - . ID=g14469.t1.exon2;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 14041 14820 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 13799 13960 . - . ID=g14469.t1.exon3;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 13799 13960 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 12795 13687 . - . ID=g14469.t1.exon4;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 12795 13687 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 11819 12695 . - . ID=g14469.t1.exon5;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 11819 12695 . - 1 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 11646 11708 . - . ID=g14469.t1.exon6;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 11646 11708 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . exon 9479 11538 . - . ID=g14469.t1.exon7;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . CDS 9781 11538 . - 0 ID=cds.g14469.t1;Parent=g14469.t1 NODE_673_length_19253_cov_42.1248 . three_prime_UTR 9479 9780 . - . ID=g14469.t1.utr3p1;Parent=g14469.t1 #PROT g14469.t1 g14469 MADYDMDAEFVQVLGESTTNRKNAAPAKGKKAANAAAAPLTAKGGNTGRSVEDTYQKLSQLEHILLRPDTYIGSTEMQSLPLWLCDADGTFSFRSVTYAPGLYKIFDEILVNAADNKQRDPSMDTIKVTIDQENNKISVWNNGHGIPVVMHEKEGVYVPELIFGQLLTSSNYDDNEKKTTGGRNGYGAKLCNIFSKEFTIETCDGERRYVQTFTNNMSAKTTPKITPSTKEYTCITFRPDLARFGMTTLDSDFVGLLRRRAYDIAGTSNGVKVFLNDVRLPLRNFKDYIDLYLKDQDNGINRTVIHEKVNDRWEVAMVLSDGQFNQVSFVNSIATTKGGTHVDYITNQLTTKILEIVAKKNKAATVKPYQVKNHMFVFVNALIENPSFDSQTKENMTLRAKAFGSECSLSDKFIKQAVNSGIIEQILSWAKQKQQSELASKCSGSKKSHISGIAKLDDANEAGGRNSEKCTLILTEGDSAKALAVSGLAVVGRDYYGVFPLRGKLLNVREATHKQILENQEIQHVVQILGLQFGKQYETTKGLRYGHLMLMTDQDHDGSHIKGLLINFIHHFWPSLLKVPGFLVEFITPIVKAIKGNREHVFFTLPEYDSWKESVSSDRSWKIKYYKGLGTSTSKEAKEYFGNMGLHQIDFRWQSQDDDSSIDMAFSKKKADERKEWLRQFRPGTFLDHKSGPIAYADFINKELVLFSMADNVRSIPSVVDGFKPAQRKVLFSCFKRNLKEEIKVAQLAGYVAEHSAYHHGEQSLAGTIINMAQTYVGSNNVNLLFPAGQFGTRLQGGKDAASPRYVFTHLSPITRLLFHQADDALLSYLDEDGQRIEPEWYMPVLPLVLINGSEGIGTGWSSSVPNYCPRAVARNILNLMNEEPLEEMMPFYKGFGGSVSKIGEGRYLVEGRINKIDDCTLEVTELPVHMWTQSYKEFLESLMTATEKSPAFITGYREYHTDTTVRFVITLTEENMKVAETIGLMKKFKLDTTISTSNMVLFDSDGRIRKYESVEEILREFYNLRMSFYQRRKENLAEKLEEEWRRFDNKVRFIQMVIRGELVINNRKKQDLLAELKAKGFTALSPASAKAADVNAEDEDAAPDAKAYDYLLSMPLWSLTLEKVQQLLGERDRKADELKTLLATTVNELWRADIDAFLVQLDATEEHEAAEEAAGAKVQAKGKGAAGKKAVVARKTVKKAAASESDDDIEEFDEDDEFVVSKPKKRAPAEKKPKVAPVAAVVAQKAPAPVPKPAAVAPAKAAAVPPAKAAPAVKPPAPARKAADSDDDDDPVGGMSLADRLAARMMNGATKPVATQQISALLGQTNAKAAPAAKKNARPAVDPISPSVAPIAKRQRQIVIDDEIEAISQTLSDVEIVDVVAKKLPANKKPAAPRVKKAPVAKANTDMFEFSDEDIVAKPTAKKSAAPKAPTAAAAKKAAAPAAAAKASIPAKKSVAKKAKKGSDDDEDEDGDDGEFAPVARPRRAAVPKKYVISDTEEEEDGEDDEAVSEFEGEEDDYSDA* # PASA_UPDATE: g7303.t1, single gene model update, valid-1, status:[pasa:asmbl_7254,status:12], valid-1 NODE_4361_length_1744_cov_40.1486 . gene 39 1535 . + . ID=g7303;Name=g7303.t1 NODE_4361_length_1744_cov_40.1486 . mRNA 39 1535 . + . ID=g7303.t1;Parent=g7303;Name=g7303.t1 NODE_4361_length_1744_cov_40.1486 . five_prime_UTR 39 39 . + . ID=g7303.t1.utr5p1;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . exon 39 240 . + . ID=g7303.t1.exon1;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . CDS 40 240 . + 0 ID=cds.g7303.t1;Parent=g7303.t1;5_prime_partial=true NODE_4361_length_1744_cov_40.1486 . exon 575 672 . + . ID=g7303.t1.exon2;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . CDS 575 672 . + 0 ID=cds.g7303.t1;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . exon 936 1027 . + . ID=g7303.t1.exon3;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . CDS 936 1027 . + 1 ID=cds.g7303.t1;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . exon 1417 1535 . + . ID=g7303.t1.exon4;Parent=g7303.t1 NODE_4361_length_1744_cov_40.1486 . CDS 1417 1535 . + 2 ID=cds.g7303.t1;Parent=g7303.t1 #PROT g7303.t1 g7303 YLHEAWHHAVGLDHGYSPLPQKIDNYTGVAPVTEPKRVDMVLTPEARRIVDDVQAQYDEFVKDTHTETLNFRDYGKAFCKTLGVSPDATIQVAMQLAYFRTHGTLHSFYESCMTKHFLRGRTEAIRSVNSDSLAFVTAFGASSPETRLALFRKAAKAHVGLVNECKNGR* # ORIGINAL: g9266.t1 original gene structure, not modified by PASA NODE_461_length_23309_cov_40.2115 AUGUSTUS gene 11118 18068 . - . ID=g9266;Name=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS mRNA 11118 18068 . - . ID=g9266.t1;Parent=g9266;Name=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 16656 18068 . - . ID=g9266.t1.exon1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 16656 18068 . - 0 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 14900 16166 . - . ID=g9266.t1.exon2;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 14900 16166 . - 0 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 14566 14729 . - . ID=g9266.t1.exon3;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 14566 14729 . - 2 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 13772 14314 . - . ID=g9266.t1.exon4;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 13772 14314 . - 0 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 13540 13591 . - . ID=g9266.t1.exon5;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 13540 13591 . - 0 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 13153 13269 . - . ID=g9266.t1.exon6;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 13153 13269 . - 2 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 12618 12688 . - . ID=g9266.t1.exon7;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 12618 12688 . - 2 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 11960 12095 . - . ID=g9266.t1.exon8;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 11960 12095 . - 0 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 11504 11654 . - . ID=g9266.t1.exon9;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 11504 11654 . - 2 ID=cds.g9266.t1;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 11118 11220 . - . ID=g9266.t1.exon10;Parent=g9266.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 11118 11220 . - 1 ID=cds.g9266.t1;Parent=g9266.t1 #PROT g9266.t1 g9266 MEKQGKAILGAVAWLAVVMHCVCVASSLPSSTVHVAPWGNDSVAVDGSAAQPYASISWALRQPGVAVIRLLSGTHVVHNTIFGTPVTLESHGDGNGALITCADDSFDDDGHDDKSSFSRANISALTLPTCQVELTSCVDAFTELTRNADPFSSAMIISSRVLLRNLTFWACPKTLLSVGSGADLTIDNCRSRGMSSASKGGVGSIFGNATVTVRDSQFVNGGSSIEGGVFSISDTATLTVNNCTFVGNQANGAGGGAISLTDEAQLRVVASVFARNGALARSGGAVRLLGQSKAVFVVTRFSENTAAESGGAIFMQDMTSVLVTDCAFDDNIALSVGGALYAQDSANITANHTRFVRNGATSFGGGVYLARSSQFAATDVLAAENFAYDKSGGFLFATDSCEIVVTRSVVRGNQCAEYGGGLSLVGAVTLTVHHSILVNNSALVYYGGALHAEGPSRITMSHTAVDGNYAAEYSGAIDLWTDAHMEMVDSTCNDNVALRYGGACALCYLGVEFNLTRVEILRNSGGSDGTIFSVYGPAALHMTNCTVGDTHQYLPSPGASMSGGGIALLDNAVLDLTDVVVRNMTFPTVGAISASSTSIVRTRRTVFTRNTSLRPFAEGGGALLLRGSASAYIQDCTFFRNSASSQGAALFMSESATATIERSTFMLNSVTSVTEGGGSAVFWKAAVVTAGKLTFNNTVIASNSGFYGAVYVDDPALALSGALVLSNTTFWKNVIYAATGGRNVATASNQLQWCASMAKRPPMRLYSGALIADSLSVDVIDGYGNPSASSPSSVLVVRLFIAASPSVLAPESGVVIGETEKAILYASIAFSETRVVAYPGKYFLVVKSSTPLYSADRFHVTLPIEIGECPGDTHPEPYLDTGYPICQPNQTEKQFPVGGVVGGFCGALFLLATGSFVAYRRKKARIEQASRTWIVEFTELSFDHEIGRGTFGRVYLGTFRGSRVAIKTLAFGDLRGSHTWPLPAAVAHSTALSMSKSVDSPAKSLEFNSLEFAAVMGGGDPHAGAAVDGDGMWSVRVHHHAAIGSVEEEVLSLGSNRMPGLKASPSQKVGKTPLAMAAARPSPSADGSSGSLSAAVSHVGMALKRLTTRLRTKREEKHTIRRAVDGFMQEVQTLVRLRHPHIVLFMGASVQAPNLCIITELQSGSLYDLYRAHPEELTWPIRLQLARDAASGMEYLHSSKPPVVHLDLKVADFGLSRLKLAESIATEFHGTVWWMSPEMLSHLPLNERADVYSYGIVLSEMVCKKRPYWDDLCATEQLIERILYADHRPSLEPDCPPEFAALVKSCWSATPAARPSFASISIALRDMDATSWPTAQPT* # PASA_UPDATE: g9267.t1, single gene model update, valid-1, status:[pasa:asmbl_7477,status:12],[pasa:asmbl_7478,status:12], valid-1 NODE_461_length_23309_cov_40.2115 . gene 20152 22674 . + . ID=g9267;Name=g9267.t1 NODE_461_length_23309_cov_40.2115 . mRNA 20152 22674 . + . ID=g9267.t1;Parent=g9267;Name=g9267.t1 NODE_461_length_23309_cov_40.2115 . exon 20152 20521 . + . ID=g9267.t1.exon1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . CDS 20152 20521 . + 0 ID=cds.g9267.t1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . exon 20752 21272 . + . ID=g9267.t1.exon2;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . CDS 20752 21272 . + 2 ID=cds.g9267.t1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . exon 21596 21778 . + . ID=g9267.t1.exon3;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . CDS 21596 21778 . + 0 ID=cds.g9267.t1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . exon 22054 22199 . + . ID=g9267.t1.exon4;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . CDS 22054 22199 . + 0 ID=cds.g9267.t1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . exon 22479 22674 . + . ID=g9267.t1.exon5;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . CDS 22479 22644 . + 1 ID=cds.g9267.t1;Parent=g9267.t1 NODE_461_length_23309_cov_40.2115 . three_prime_UTR 22645 22674 . + . ID=g9267.t1.utr3p1;Parent=g9267.t1 #PROT g9267.t1 g9267 MTGFACASTYACALAIMCVCAVVCVECAPTSSSPTGTGRRVILISVDGMRIDYLPLAKDLNLTNIAALIEGGTVAKATLSVAPAMTFPAHTSMISGVNPNTHGILINCEDEWRKMKIPAETACGEHYFYEDIEGKTIFDVATASGLSVGTVDWPVTVGLEVDYNYPGNVADPENVKEAGWFMAALRGAAVRKLFPTPEHLWGVDDPKRGDIAVEILRAGAASGKPVDLLALHYNDLDGVQHGHGWMSPAAIAQLQLIDASIGKLRATVTELGLAETTAFVVVSDHGFMNITKTVNPQVVFNAFGLVGETVLPYVGSTGGFFPVFLAPNASADNIARLDNVLDYMKSQTNLGIREIYGEAELKAKGCFRGAHAAIEFEMGTDYDVMIEGSVISAVRDKVGQHGYPPWRPEMYASFVAAGAGVKSAFAIDEAHLIDVAPTIAQLLGIRLDWAVEGRALSEIFV* # ORIGINAL: g9264.t1 original gene structure, not modified by PASA NODE_461_length_23309_cov_40.2115 AUGUSTUS gene 163 5125 . + . ID=g9264;Name=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS mRNA 163 5125 . + . ID=g9264.t1;Parent=g9264;Name=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 163 248 . + . ID=g9264.t1.exon1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 163 248 . + 1 ID=cds.g9264.t1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 405 733 . + . ID=g9264.t1.exon2;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 405 733 . + 2 ID=cds.g9264.t1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 1261 1518 . + . ID=g9264.t1.exon3;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 1261 1518 . + 0 ID=cds.g9264.t1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 1678 2404 . + . ID=g9264.t1.exon4;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 1678 2404 . + 0 ID=cds.g9264.t1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 2555 3241 . + . ID=g9264.t1.exon5;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 2555 3241 . + 2 ID=cds.g9264.t1;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 3495 5125 . + . ID=g9264.t1.exon6;Parent=g9264.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 3495 5125 . + 2 ID=cds.g9264.t1;Parent=g9264.t1 #PROT g9264.t1 g9264 NAGEDPDIEDVMEVSDSFAQDIAETSIHVRFGGIILRLSERKNQMAVCMVQLEELRFSLYPGQRVRVDNSDPSASPLYADDVISRWHSQYSALFSKPERDQFLAALKRKRGCVSCANAMIVPTGFAGDGAHVAYVRMLASLKHELSLPPDTPIVKAEYSEYWAVGRAAKNRPVSAGVRLEPPKPSLAAKVTPFQLVFDNRQFGKIVNYFKDIPAFVGAAAFLCQLEDSFASSARTAAPSTTTAPATMTAESDWSVRVELVMPKLVLPPFSGHSGPPEIASQVMHVTASKVIVSSNDASMQPSNCVGELLPFLQGALYSSDPSFPSEISDPSALVPDDPAEWRAAVLQGWRVDIEQLWIDTLPHPDHGKSATILEPADITAFFPNFAASSKSQEKAQLSSQSSTSSASLPCIFVRASQLNATLNHLQYVYLLHMAEERFAIPEEISATSFRAPDREQRAAFAAAADAPRGDSLIYLAVDHVGLRLQRAYPDTAPPAPSASAPSVSSAGANQIPHSQSHTSVTHPSPVQQQSSPAPMRAEGPKGTQNSNDSGRVIAPLASSDIHKTSPARRSLGASTAMMRASTSDVPGFGSRGGGAAVGLSSPSSRSVTSLPGALGLGMTPSSSEDVFVVDALAAAMGTQHPDVDAGSGGADGQDSANSASASQTTLAMPSMGVSTAVSESTLNLQYDEIQAEIVEVADRTDDISAQDDRTASATHPSAQPPIATTDPNYIASARLDGLQLVHASSGVLRLLIKRVAIGDTMFPLPPALASPSLISGLASSSAAGLSADFDVASLTSSLPKEDGPDALFSATIDPAHVVVRFKMKQPPKGDAIDADTDPDVASVRVCGIGASLANSTVAAIGAFFDDYGPPFPQPEIHILAERCHVGLHDEVYVPSQYSEYQRRAGQQPKPPVQLHMGHVTAFKDARGTWSVGAASSNTGTSEDDTLSVVHEIGEAVSTVGEVVVGHVSLGTDNRRGSVVLSADEFDPLRFCGDTFDGDAINNGGLRPRNESRPPGSRTSSVSTTASYAVSMSASVGGESTRAPAHVERELKVLRAQVAELNRENGDISRDRNRMTTVIDGLREDADSSKRRVEKLSAELERVRQIALRQQERLKEYQAERDRMRQGTGKSAAARPGKDGGPTQTLHQQQQLKQQQPLLQPKGGDGGDDGGDVMWARERADFQRQVELLNSRVQEMTEERRLNMQAKQRLAEQFQGLVDEKDAEIEALRRKLGIQKTKR* # ORIGINAL: g9265.t1 original gene structure, not modified by PASA NODE_461_length_23309_cov_40.2115 AUGUSTUS gene 6478 9866 . + . ID=g9265;Name=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS mRNA 6478 9866 . + . ID=g9265.t1;Parent=g9265;Name=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 6478 6816 . + . ID=g9265.t1.exon1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 6478 6816 . + 0 ID=cds.g9265.t1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 7131 7274 . + . ID=g9265.t1.exon2;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 7131 7274 . + 0 ID=cds.g9265.t1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 7434 7547 . + . ID=g9265.t1.exon3;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 7434 7547 . + 0 ID=cds.g9265.t1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 7765 8885 . + . ID=g9265.t1.exon4;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 7765 8885 . + 0 ID=cds.g9265.t1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 9092 9256 . + . ID=g9265.t1.exon5;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 9092 9256 . + 1 ID=cds.g9265.t1;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS exon 9530 9866 . + . ID=g9265.t1.exon6;Parent=g9265.t1 NODE_461_length_23309_cov_40.2115 AUGUSTUS CDS 9530 9866 . + 1 ID=cds.g9265.t1;Parent=g9265.t1 #PROT g9265.t1 g9265 MMDEMDSVSHGKDASAIDMDIADGLGDDNGEMSTRADGKGKGRANGYGSSGHFSTGGASMKASLVRLFERLRRRDGASTAPNVPMELNPKPETTEQKTSFWRRLWAFVLRANPYAHIQREPTVVKDMPTMNNSPLQPYEYHELSEKWTPEAVDAIIPEALQVYNGLRLSQNEHIDVRKFTQGLGLMGYGDSKLPKYLFEAINIDGTGTISFMELVQFMLCVTRGSQEDRLAFGFRLFDTDRDNVISRMDVMRFVDAICNSLWGLTITAPELNRFVEGLYSRFEFDSTGHMSYEGYCKGCSDSEAFIRSFGLTELQSATPQRTLNRHGRLFVFGHEKWNLMLGVMLALQLSEEKMPPRPRAVEEALTPDEFTSEETYEINATFIKDKTFIVHYASEAFRDIRAWSGISLTRYLYSLGIKQVFSSLLLGDLTTYTGLGSEGKSGSFFFYSHDGKFIVKTISVAEKDTILRILPDYYEFLRRTRDTLLSRVYGLYQLRFRGQTFFFVVMSNIFCSPKAIHLRFDLKGSTVGRFTATSAEEIQRADVVYKDLDFLKSSRMLNIGEKRGNLLMAQLRKDSEFLSSHGIIDYSFLIGVHKTSGGFETDPEEWVIRHMDELVGLFQQLQEKTSDGYLDKLDFHDFGHFAYKNSSSSGLGSDPEVDKDNGLGRLAVMESQRTTTEGSLMIGEEIFFVALIDIFIAYEFRKQAEHMIKSAIHDSTKISVVPPALYRNRFLDFISDIIM* # ORIGINAL: g3030.t1 original gene structure, not modified by PASA NODE_9179_length_341_cov_41.5827_potentialcontaminant AUGUSTUS gene 2 341 . + . ID=g3030;Name=g3030.t1 NODE_9179_length_341_cov_41.5827_potentialcontaminant AUGUSTUS mRNA 2 341 . + . ID=g3030.t1;Parent=g3030;Name=g3030.t1 NODE_9179_length_341_cov_41.5827_potentialcontaminant AUGUSTUS exon 2 341 . + . ID=g3030.t1.exon1;Parent=g3030.t1 NODE_9179_length_341_cov_41.5827_potentialcontaminant AUGUSTUS CDS 2 341 . + 1 ID=cds.g3030.t1;Parent=g3030.t1 #PROT g3030.t1 g3030 IRAQGKPFTACGRHILASSECRTPHHHRQWHPRIHCNAIPRRCAPARPHRHLCVTADNVSLVRSCDGAAGGRRPDSGSASLHRDLCDNNRRPSLGHSVVRGDHHPARPAFAHI # ORIGINAL: g12387.t1 original gene structure, not modified by PASA NODE_4571_length_1449_cov_37.3981 AUGUSTUS gene 1 1423 . - . ID=g12387;Name=g12387.t1 NODE_4571_length_1449_cov_37.3981 AUGUSTUS mRNA 1 1423 . - . ID=g12387.t1;Parent=g12387;Name=g12387.t1 NODE_4571_length_1449_cov_37.3981 AUGUSTUS exon 1 1423 . - . ID=g12387.t1.exon1;Parent=g12387.t1 NODE_4571_length_1449_cov_37.3981 AUGUSTUS CDS 1 1423 . - 0 ID=cds.g12387.t1;Parent=g12387.t1 #PROT g12387.t1 g12387 MKRLSIASLLIAAVAFIGLSSATPLDDYVYTDDGAFQITDLKKTLNGTTGYTVHLYNFTSQKWLTPADSSMPVWWHILAVIIPDEVDKTLDSAVLYITGSHNSATWLPASDDEDLAVAASLAVGTKSTAAVMYQVPCEPITFPADPWHKNDRTEDAIIAYTWWHYATVAPDQPEWVLELPMTKAGVKALDALQIILPNYIGGTPINKFSVAGASKRGWTTWLVGAVESIRPNNRVLSIIPMVLDAIHLTDFFHRQFTFYGAWTFALKDYVDCNITLLVDSVGLNNVFELVDPWFYRDRLTMPKLILNAGGDEFQMPDDHRYWGHQLPGETHFLLVKNAEHTLAIGLVEALSAITAWAASVQAKAVRPTVDWAIDSTGRIFVNTTVAPLSVDVTWSDSALGVSQGRRDFRWGAKGVEPCIGILGGCLRPLLWETSNTTGITFTSPTSFNALMDTIEGQWRAFTLEIRFETPFSTE # ORIGINAL: g7603.t1 original gene structure, not modified by PASA NODE_3367_length_3612_cov_39.4142 AUGUSTUS gene 2548 3219 . - . ID=g7603;Name=g7603.t1 NODE_3367_length_3612_cov_39.4142 AUGUSTUS mRNA 2548 3219 . - . ID=g7603.t1;Parent=g7603;Name=g7603.t1 NODE_3367_length_3612_cov_39.4142 AUGUSTUS exon 2548 3219 . - . ID=g7603.t1.exon1;Parent=g7603.t1 NODE_3367_length_3612_cov_39.4142 AUGUSTUS CDS 2548 3219 . - 0 ID=cds.g7603.t1;Parent=g7603.t1 #PROT g7603.t1 g7603 MAPKKELTFYCDICEKNFALHSKRNHEFVHATRQLRCSHPKCNKTYTQPPALSRHYKLQPSHNPRQDRAKVHIEQACRSKSRSNTRASSFAVVPNLSDDSDFTDDDQPSSESEDGQDEQRFPSVVAEVALMPAAQFSLSTTSSEDVYSPVFSGDLSEEQQSSDIDQGVWQFIFSDVLSTNETPLSTPQDSCDIACVPQQMEMSPLIWGLDFDALAQWLSLPAA* # PASA_UPDATE: g7602.t1, single gene model update, valid-1, status:[pasa:asmbl_5943,status:12], valid-1 NODE_3367_length_3612_cov_39.4142 . gene 45 1920 . - . ID=g7602;Name=g7602.t1 NODE_3367_length_3612_cov_39.4142 . mRNA 45 1920 . - . ID=g7602.t1;Parent=g7602;Name=g7602.t1 NODE_3367_length_3612_cov_39.4142 . five_prime_UTR 1687 1920 . - . ID=g7602.t1.utr5p1;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . five_prime_UTR 1326 1501 . - . ID=g7602.t1.utr5p2;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . exon 1687 1920 . - . ID=g7602.t1.exon1;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . exon 1057 1501 . - . ID=g7602.t1.exon2;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . CDS 1057 1325 . - 0 ID=cds.g7602.t1;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . exon 590 727 . - . ID=g7602.t1.exon3;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . CDS 590 727 . - 1 ID=cds.g7602.t1;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . exon 45 419 . - . ID=g7602.t1.exon4;Parent=g7602.t1 NODE_3367_length_3612_cov_39.4142 . CDS 45 419 . - 1 ID=cds.g7602.t1;Parent=g7602.t1;3_prime_partial=true #PROT g7602.t1 g7602 MYSTRCDNVAMCVAPVNMVRRGSPRMQPRRKFTLSRWTGAVLPLCAAVAMIAFGCAPVADALIAPKAITLPLAWWRTDTHSTEKPVGRYGHASVYHEEMVWMFGGYRHDKNPIWLDDTWYFDTGRSQWERVHQSNGPLPRSGHTICAYKGRLLLFGGDDGGQRNRGDSQSPSYVAGHFFDDMWVRDIRVFSERARRARADALAAEEEMAALNAGEHLLQNRNGFADDGEEDNIGTRHGWTDDWQRIAPAESETGDRWPSS # ORIGINAL: g13897.t1 original gene structure, not modified by PASA NODE_5137_length_1005_cov_54.7226 AUGUSTUS gene 84 545 . - . ID=g13897;Name=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS mRNA 84 545 . - . ID=g13897.t1;Parent=g13897;Name=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS exon 478 545 . - . ID=g13897.t1.exon1;Parent=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS CDS 478 545 . - 0 ID=cds.g13897.t1;Parent=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS exon 303 345 . - . ID=g13897.t1.exon2;Parent=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS CDS 303 345 . - 1 ID=cds.g13897.t1;Parent=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS exon 84 156 . - . ID=g13897.t1.exon3;Parent=g13897.t1 NODE_5137_length_1005_cov_54.7226 AUGUSTUS CDS 84 156 . - 0 ID=cds.g13897.t1;Parent=g13897.t1 #PROT g13897.t1 g13897 MAGRKLYKLDGVSLTPEDLFLLSHGETDIDLTDEAWERVKESREVIEDIVAKGDPVYGINT # ORIGINAL: g2893.t1 original gene structure, not modified by PASA NODE_4942_length_1126_cov_27.6708_potentialcontaminant AUGUSTUS gene 1 68 . - . ID=g2893;Name=g2893.t1 NODE_4942_length_1126_cov_27.6708_potentialcontaminant AUGUSTUS mRNA 1 68 . - . ID=g2893.t1;Parent=g2893;Name=g2893.t1 NODE_4942_length_1126_cov_27.6708_potentialcontaminant AUGUSTUS exon 1 68 . - . ID=g2893.t1.exon1;Parent=g2893.t1 NODE_4942_length_1126_cov_27.6708_potentialcontaminant AUGUSTUS CDS 1 68 . - 0 ID=cds.g2893.t1;Parent=g2893.t1 #PROT g2893.t1 g2893 MINDEVERLMFLEMLKASKNNA # ORIGINAL: g216.t1 original gene structure, not modified by PASA NODE_1927_length_8495_cov_39.3958 AUGUSTUS gene 4612 8432 . + . ID=g216;Name=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS mRNA 4612 8432 . + . ID=g216.t1;Parent=g216;Name=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 4612 4710 . + . ID=g216.t1.exon1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 4612 4710 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 4972 5751 . + . ID=g216.t1.exon2;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 4972 5751 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 6037 6135 . + . ID=g216.t1.exon3;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 6037 6135 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 6591 6683 . + . ID=g216.t1.exon4;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 6591 6683 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 6938 7054 . + . ID=g216.t1.exon5;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 6938 7054 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 7679 7753 . + . ID=g216.t1.exon6;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 7679 7753 . + 0 ID=cds.g216.t1;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 8175 8432 . + . ID=g216.t1.exon7;Parent=g216.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 8175 8432 . + 0 ID=cds.g216.t1;Parent=g216.t1 #PROT g216.t1 g216 MAGQYESSNAVSSWSALNVPQPVIDPRKQGLLEARMARMGAAMDSASFDAYTSDARLDASDGAFSSSPDTRKRKQSTPGDQRTKQARIDAETIASATVRYEEELRKMKASVDDAERIAAVHSERVDLLEATSAQLRRELEGKIAQVTRATATIKELLTQKSIEEKRVLRERQMRDSVRLINLSVRRQGTEFVEDWQDGAAFIELNRRQAELQVQKDEIEKMKKALTKKKTLQVESGGDSLSSQSSYVEDVGEREEVIRLRLLTIRRTEGEIAVQRDALERERNLHVRETKRIRDEDASRFNDNRVLNGRYLLLDLLGKGGFSEVFRAFDLDDNRYVACKIHQLNSQWNEAKKSNYVKHAVREYNIHKSLNHPRIVRLYDVFEIDSDSFCTVLEYCKGNDLDFHLKQHKALSEREARSITVQVMSALKYLNEIRPPVIHYDLKPGNVLIDDGDVKITDFGLSKVMADHDHPNGSSEGMELTSQGAGTYWYLPPECFELSKLPPKISSK # ORIGINAL: g215.t1 original gene structure, not modified by PASA NODE_1927_length_8495_cov_39.3958 AUGUSTUS gene 207 3814 . - . ID=g215;Name=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS mRNA 207 3814 . - . ID=g215.t1;Parent=g215;Name=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 3713 3814 . - . ID=g215.t1.exon1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 3713 3814 . - 0 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 3268 3509 . - . ID=g215.t1.exon2;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 3268 3509 . - 0 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 2609 2823 . - . ID=g215.t1.exon3;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 2609 2823 . - 1 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 2042 2116 . - . ID=g215.t1.exon4;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 2042 2116 . - 2 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 1654 1811 . - . ID=g215.t1.exon5;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 1654 1811 . - 2 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 1230 1384 . - . ID=g215.t1.exon6;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 1230 1384 . - 0 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 619 829 . - . ID=g215.t1.exon7;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 619 829 . - 1 ID=cds.g215.t1;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS exon 207 377 . - . ID=g215.t1.exon8;Parent=g215.t1 NODE_1927_length_8495_cov_39.3958 AUGUSTUS CDS 207 377 . - 0 ID=cds.g215.t1;Parent=g215.t1 #PROT g215.t1 g215 MGDLRGGLVAYGSGFGKFAVPQSQGLLHQQQYGLGPQSKALQGTDTNGGVEINANKPTEVVGIDMAGMALRALSPSLYRFSHITMLYLSGNLLTRIPAGMSRMAALTVLDLSNNRLQSIPADIGDLVRLRELLLYNNLVSSLPFELGRLFMLQTLGLAGNPLIEPFLSLSQEGANHLVTFLLDNGPVRPAPAERPWIQLPAPEDVNIPPTAEGFTIMCYNVLCDKYATRQLYGYCPTWALEWGYRKQRILQEIIGHNADIVCLQEVETEQFQDYFYPELQRQGYGGVFHPKSRARTMSDEKRRFVDGCAIFFRTSKFALVKDYLIEFNQLATANAIDCDSKENMLNRVMPKDNIAVAVMLEFRGSQTPLFVSNVHIHWDPSYKDVKMVQCAMLMEEIRKIIASSRKMRMPLIVCGDFNSLPDSGVYEYLSNGRLAVDHSDFET # ORIGINAL: g2765.t1 original gene structure, not modified by PASA NODE_4691_length_1322_cov_44.1282_potentialcontaminant AUGUSTUS gene 1078 1322 . + . ID=g2765;Name=g2765.t1 NODE_4691_length_1322_cov_44.1282_potentialcontaminant AUGUSTUS mRNA 1078 1322 . + . ID=g2765.t1;Parent=g2765;Name=g2765.t1 NODE_4691_length_1322_cov_44.1282_potentialcontaminant AUGUSTUS exon 1078 1322 . + . ID=g2765.t1.exon1;Parent=g2765.t1 NODE_4691_length_1322_cov_44.1282_potentialcontaminant AUGUSTUS CDS 1078 1322 . + 0 ID=cds.g2765.t1;Parent=g2765.t1 #PROT g2765.t1 g2765 MLDLVAVGFNSLTPETVVHHIVPYLSNVDVSSLAKVNRTLHAHLRQKRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVL # ORIGINAL: g6827.t1 original gene structure, not modified by PASA NODE_331_length_26763_cov_42.4469 AUGUSTUS gene 48 3485 . + . ID=g6827;Name=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS mRNA 48 3485 . + . ID=g6827.t1;Parent=g6827;Name=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 48 96 . + . ID=g6827.t1.exon1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 48 96 . + 1 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 356 522 . + . ID=g6827.t1.exon2;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 356 522 . + 0 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 890 914 . + . ID=g6827.t1.exon3;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 890 914 . + 1 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 2025 2105 . + . ID=g6827.t1.exon4;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 2025 2105 . + 0 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 2244 2294 . + . ID=g6827.t1.exon5;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 2244 2294 . + 0 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 2516 2545 . + . ID=g6827.t1.exon6;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 2516 2545 . + 0 ID=cds.g6827.t1;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 2775 3485 . + . ID=g6827.t1.exon7;Parent=g6827.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 2775 3485 . + 0 ID=cds.g6827.t1;Parent=g6827.t1 #PROT g6827.t1 g6827 HPNVMGLVGIAVREEPVLIVLEYVPHGSLKSFCHHVPESQRQLHVTIELLVQMAAQIASGMQYLHSIGIVHRDLAARNVMVADFGLSKHIQKDYYRKQSKGGKIAAKWMAIECLTRKIYSEKSDVWSYGVTIWEAFTFGESPFPGISNADVVGHLERGHRLSQPPACPPQLFPILAQCWEFDPAFRPTFAEIAARVQAICDGLALMHSHAGHVPLGPAGVSVVDDDIDDAAKPLKPRTKHMTRTHGNRGPSDYIEMVARTIRGAVTTGRSQPSTARTSEWMESQSNPLRSLDLASESGAAIAQQYSTENSYLNEGEGDGQLLKSVSSGASNPLRPIVASLYDNDGCSTDDGKHTPLSVREKKGRSHYDNE* # ORIGINAL: g6829.t1 original gene structure, not modified by PASA NODE_331_length_26763_cov_42.4469 AUGUSTUS gene 18270 20979 . + . ID=g6829;Name=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS mRNA 18270 20979 . + . ID=g6829.t1;Parent=g6829;Name=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 18270 18508 . + . ID=g6829.t1.exon1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 18270 18508 . + 0 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 18784 18889 . + . ID=g6829.t1.exon2;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 18784 18889 . + 1 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 19050 19231 . + . ID=g6829.t1.exon3;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 19050 19231 . + 0 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 19438 19535 . + . ID=g6829.t1.exon4;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 19438 19535 . + 1 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 19782 19860 . + . ID=g6829.t1.exon5;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 19782 19860 . + 2 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 19975 20137 . + . ID=g6829.t1.exon6;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 19975 20137 . + 1 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 20397 20537 . + . ID=g6829.t1.exon7;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 20397 20537 . + 0 ID=cds.g6829.t1;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 20728 20979 . + . ID=g6829.t1.exon8;Parent=g6829.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 20728 20979 . + 0 ID=cds.g6829.t1;Parent=g6829.t1 #PROT g6829.t1 g6829 MTAASFRGACIPLVTCMVTCMVGLTADGADALAHKALRYSEGSNSSGATVAVTDAELSDDELAAYDACFGPQRAAFVCGRFGTLTILAILTALVCLGKALQFHCNGGKRAWLRHQVVIFYLAFVQSLLCFFHWVKWPYSALIFAAQYVQLIQFLVVSWFCGTMACRIVGRHELVKRIVHPPLIFFFLYFTCVFVFGLIYVKEAAKECLEPHWLLFSVSNAILAQLCVVAGYLIIRKLNATAVSLNYKLTTIRGLIGLMVVYEISAAVAIIYDILLITIGREYGCDGIFGGKNSVGTTLAYVILKFCKILLPSWTFLFIFKAAKAPPADVPAVDSSVHSSTFESRHDSHGSKSQHSMFGETAALGANDEEGASPRIYGSLDSLSTPLMNGYDAAYARLSPGDINSASQSTPAYEHYSEDD* # ORIGINAL: g6830.t1 original gene structure, not modified by PASA NODE_331_length_26763_cov_42.4469 AUGUSTUS gene 22450 26284 . - . ID=g6830;Name=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS mRNA 22450 26284 . - . ID=g6830.t1;Parent=g6830;Name=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 25841 26284 . - . ID=g6830.t1.exon1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 25841 26284 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 25275 25736 . - . ID=g6830.t1.exon2;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 25275 25736 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 24904 25031 . - . ID=g6830.t1.exon3;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 24904 25031 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 24317 24509 . - . ID=g6830.t1.exon4;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 24317 24509 . - 1 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 23925 24096 . - . ID=g6830.t1.exon5;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 23925 24096 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 23495 23631 . - . ID=g6830.t1.exon6;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 23495 23631 . - 2 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 23220 23327 . - . ID=g6830.t1.exon7;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 23220 23327 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 22898 23074 . - . ID=g6830.t1.exon8;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 22898 23074 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS exon 22450 22701 . - . ID=g6830.t1.exon9;Parent=g6830.t1 NODE_331_length_26763_cov_42.4469 AUGUSTUS CDS 22450 22701 . - 0 ID=cds.g6830.t1;Parent=g6830.t1 #PROT g6830.t1 g6830 MVPPIGPTPLSSGMAGSGGAGALFRMGSAGRDARDLQGTPGGSVFESTGTPVLHPHDTPLSAHDGDTPCAKILFASPDENSNMDMMASSQTSVGTQVLYGSSALDAENSMIGDAPPITPRENSECFTFELPGSAYELRRRKRSSADMENSPSESLPRLPRLPTLPGSPKLKVVPGMKNRLHELLGHSQRPRPFGGIGADQSSLSIQSQQHQQYTSHAPAHAGHAPLAAPIVAGSNVNPFTPRVAHVQSHSQGQAQGERDRTSGAHEHSDGLSDSLQEGFEIALQRETMRGARSVSNIARYNQEFEELEVIGRGEFGTVFKVRNRLDGCHYAVKKTNQRIRNSSEEKRLLREVFAHAVLGVSPYIVRYYSAWEEDNFLFIQNEFCDGRSLGDAVSKRTFLEPELKEIVRQISEGLAFMHEENLVHLDLKPGNIFVSTSTHVGHRSKKRRSEGSDVEAATCTYKIGDLGHVTAADRPVVEEGDCRYLSREVLEENFEDLTKADIFALGLSVYELASGQPLPKSGEEWQALRNGNLPHLPLVSEGFQALLKVMVHPDPSQRPAADEIPAILESLDPKKRTRTDSQSQLRIELNQEKFKTSVLQEQLRVHKENGLVDVTPVIIPPPPCASDASSITLMPPPASRPRGAAVVALGKGRGRGLANHPPGVHSVGGVLLDESGKPIGRLNRSHSVSW* # PASA_UPDATE: g6828.t1, single gene model update, valid-1, status:[pasa:asmbl_5889,status:12], valid-1 NODE_331_length_26763_cov_42.4469 . gene 4350 17553 . - . ID=g6828;Name=g6828.t1 NODE_331_length_26763_cov_42.4469 . mRNA 4350 17553 . - . ID=g6828.t1;Parent=g6828;Name=g6828.t1 NODE_331_length_26763_cov_42.4469 . exon 4350 17553 . - . ID=g6828.t1.exon1;Parent=g6828.t1 NODE_331_length_26763_cov_42.4469 . CDS 4561 17553 . - 0 ID=cds.g6828.t1;Parent=g6828.t1 NODE_331_length_26763_cov_42.4469 . three_prime_UTR 4350 4560 . - . ID=g6828.t1.utr3p1;Parent=g6828.t1 #PROT g6828.t1 g6828 MRARRSAVVACVAIALVLASSSAGASTRVAKGGESAESTPCDVIRALSASQIFPDGLSGVALDVTWAEGLCAASPQSLDYESAWTALPSDAIVFTALSRASQLSVAGLEVHRSLRARVDVDAVYVDVAIGLRGRVSGTAGGVAFDAPFVATMSLRTGGFSSEVSCHAVYPWTGSLLSSLSDDATATAVVVDADLFDGTPAQLVVSAAQSAQNAQRNGLVALIASHFGRLRLRLDGIAAATTSLSASVRGAFLDAASLGDVDAASAFSGRLWDNAASTLSSTGEFVVLLPRSEVGVEEDAATRDAVHAIASASAGVYCDSVQVVAEAIQRSIGATIFVESDAFRVLSVSASTSAVVTCIRGDVAMGALSLSLSTAQPYAPRTASLSWPPRFPTSIFTGDARAAIHMTKGAPMQCRGSLWGYAKVPSPTGGDDVVVTATRGDLFGDEHAGRLVADILLSEASAVAAVNAAFGQAAQAVSFVGPLASIAARIPTDISPLLSKLGNRCTAPTLVRFIDWAHSELAPLRVTLPTPSEVSGSSLVNLTFSLSASMRTQPVSTADFQWIQARLSSRLDDLYARFEKMWGPAVRPWARPSLDATVKVSSASVSGIANAGLSVLLDVHAGTSTPHSDGASVVTRTLATLAVTFPRATGLFGSALFVYDSNADSLSVAADLSLSARETFPEYAWRALLTGDVLSLNRRVSVALLVDAARSALTTARSVSWLGQTLQPTSLVSGSAADGVDFAHMWANVIDAFEQLRGAVGTVDVHSALSRVMSSINANGHFAACAWSVADVNSGRSEAAVALAFNFSASHVQPFVVNDDGWPMLATSRFRGNAVMVSSLAFVLSGQDVSAFEMSAQSRARLTGWSAPFRHDMLSGHVEAGSLSVSVALDTRDASSATSYATLDVDARVVLDEADGSTQSLQLSVSGLGLAADANADTLDFSRGPRVEIKTDSSFRIATGVLVAALRESIVRAPSKLSSGAFGVPVAPLLPASLEKVVQSWDGMADTSILPWMSSISIDGGPYLVQSDVCVGSLALPARVSFSINGGAFSFACDVPALPTSSLKSFVDSLHTVLSGCVGTEFFSVGVVSVQKDKTDCGSFGLIPTIPGAVWRMDVTNSQPTGTATVFPSRTWTLATFASFTHWSDLAVAATALFGSGGRLRPWLSSVVSANYVPEELRSVFPASLNLVGIDIEFSKEHDFVPDALESAVSKFSVTGDKWSTFNFEGSALARASLACNVSAGIGAVFGVAPAARLSVTTNFDGVALLPSAVVADGQNTFDLTVYVEHRAPPSSNASTATPTVARVEWRQSIRLDTGVPVWDALLGSFPAQLSPEMSAVVSVSAVNGSTVRGLNPTAQVRIAVSRASGPNGTWILPYGISLSNSLVLALGNVTQMPTVPRTTVARMSISARVSASASASSASGHLGILDVTANDASVSGEVVATAGLRDAADANQVVVSMSDVGRLGNIFDYDWSVRAEARVAQLSFGAASLQVPVLEGLSFDVNASMTSPSAGDMLSASAGWALSIKHPIDSITKVYERFAALNYTTFCGWMDAAELVRTGMTGYPAANAPIPFLSKAVADISQDGIGRIMQDARARACDLHQSWTVTLLCAVLDAELGAGACESIEMGETALTVVVTANTARSYADRFRLDFAWMGLGHDIPLGLGFPGSVSINGTFSLRLALTADWSNGGIHLHAAPGSFVRASVAAEMLGAVELAIGPVSSRFGNLNAAIGRGAPAFLEARIGDDGGVAVQLSGSARMSGSLTALSEPVCDLRISVALADALDPSAWHVTTYCDPDFVGAWERVMERFGSALLNYFKNAMVVMSQLQDGFDEFMQTLLVAVPSWIVPIVDRAIADAIPAKLESIIGHDARQGIITELTEFTNSLIMNHTGVIDYGLLDQILVDGFTFILCKHLKPDTCPPAPDASKDELTWPLTWTDTLRPPVPAVHFGLGGGGFAQLDFNCDPKLTLDFTFRATLVLSKTKGISLRFDNNPVLHSGIAFALGGDCGLEGRLGFVSAILAPDTSSGVSGALTVTHVSDKWSADFAVDAVLRGELDIGLAGKLKGVLSEDVEALQTLPYVKVASMDIEWHWNLTHPSVVPPTIKFGGVSFCVGSFVSRMLSSVKKKLEILLNPLDKVIGPNSLLMSHVGEPAKVLFGRDMTLLEFLMEVEKTQCEESCMFDGVFEALEALSSVEKILAKIDALMGLADCMSWSQIKSFHFDPSVADPAPVPDGPEPANGFPALSFAPDADPVHVERVTEVWADVTRDDKDSGLKFLLKAKDIPKYILDLIMGKPFDICELRLKPFRISIGMVTWQVVVWPVPTVWLGVSVSAQLVLTPPTIVYTSRGISKFISSHRPADMAAGFGMRARNDDGSPYWPLQATVRVGGFVGVGFGWGPAWVEGDAELFLEAVGKLGLVTAYSDSVVYFDQLFWIIKKNGGLGALALEFDLNGGVEVRLRACVSVAFGRKCWTLASKEWKMNLFHIQSYNPAVPPPVCSDRGGLNLNLNSYSRRSIGDDVLPHTYGVARRAWDEFTDNSAWTYQLHEHDGLRTHGLLPPGDSASVSVPSNSRDVSAAMPITFEGSSGGERFSCRVLSRISQPVQFPANSAGSVHVNIDGDRSVGLLQLSPSLLKTSQADGASPQAPTSGSSVMFAGGAPIGQRCRTVLLDQPVGGMTVHVTGVPCTTMMKTDVTSLVRIRGAPADYASQPVHMGSALSVHVTVEATEYRMNDNTVTGDRGVLALNLEEPEGVTNMHVASHPVLPSLLVVESLPEYRVLEPRGGSGDDMFDIPDLITIAGYLNMSGAESRNTLNVTMYTPTTGLNASLTPAVVMMDASAKRRSATFSDIKRRFLTVFGKSDATSIVKVLGAEDLSHVRVRGIGDGNSTMVYPVTQCDPLARIDLDLQGGGEHTVLVGRDEAIRDVTCTIAVAGGVEEGQVNSIVIQSRNDGRPYQFTLHSDKLLVYDSVDTREFMTVYFENIHRFVFQFSNVSGVYSRVTVVTPTARTEMHFDFPAEPTNADWPNHITVCRSLASTVITGSFLETVVGPDQYDITCNTQRTSLEDDDVLAPNPLYDIHGSVYLVNTASGVTNASLHSYKSGNQGFVVGPSCIDPVENTGMTSPTRPPPVGPSEWLCSILQQHGVAAEHCYANCTVVYLGLMHVAVQTGAGADYMHGHDLLPSASFNIALGDGRDKIVWARSAADALLDLGSDSDQLIVEAPVYRTFAALGDDDVIDAIDVWCGASIPHVVNGVVWPLGADSSFVLSLGYYRVRDQLNVRAGLPLWSPENGAAFDIPIVVAAPVARPRVWSSAGHVAEQSRRLAEAQLPVGVTHDARSIRAGGRGVADDGSVVYVVMNVTGSVVRRDLVDNSTVVVLAMENQCVLSLNADVPQPGVVPPANWNVRVQLPALVVSNFIVVESTAASNGTVHVVVPATSTPASTHLRDSVYAIGIAASDPGDYLVWTAGGLTVKASNLPHLRTSLEHPSAIAVDHARSWPELVFDSAMPGSTVSVANTGASVFLSGVRAVLSGSLLTAAHTGGFVFGAAGLHTDVTVSASDAGVSLVHVVDDCVNLNFTTAGSPSRTVSPWLVDLGAAFGVRPGALRECSLALHNASRLAVVTHAINATNLDGLRNVGLLTCQSAMVALAETANPWSAVDISGNNVTIPGRFTVQVDPGAAVTAVAAFRPIAAPFSADCGDDSRDPATQWSFVDPSGSASSAAAITWTSRACRASIIVPDVGFAPAVTLHDSTLLSVGVHFQSDRAAAGAYRRTLLLSDTAFRATGMGEGIAKEGISLSSVDWAAECPLDIVLQDGANTLQLAAVARSSGANAGNVRVGGSVTAFTLDMPPMTGVEFPSSAVFMSPRTGALELQPSASTTCFDADRVCSAGFWIAAATLGSQVCFSAPALSECTREKTIALSVDSGAGSSFDAEFSCAASPASTVLRFGADAEPQPQHRYDLWVRLAFGLFFISAVCCVVVWVVTRQWVLFSWHILLVSASLWPVAMDATEPSDAAAIVLASQRAVFSLLSPWYCGGNSVADAAAATFGTAVSGFCVAAACVVAAVFAVEIAAKKVELPDRAKRVHAASTIVSTVLVAVYVFVFMPAHIFHLSRFGWTGIASVSVIAVVVVFAAFLRASLDVGDSGSSGVDRLQRTILPPVFAPRGLTPSRVNLALNAVAFVTACFVCMVSSTDLRETGAVSTTSLLGTVTFFYIVLHAVSIWNTLAWNANATPLASSGRSRVFAVLNIAVEVLVLVLGFAFIALVKGGSGSATPGRVWVTWQLVSLLWVLGQCGYAIHQRRRKQSGASDGTDGDRDARDPQAENRALLDMETMEL* # ORIGINAL: g12206.t1 original gene structure, not modified by PASA NODE_2538_length_5978_cov_37.4633 AUGUSTUS gene 210 3642 . + . ID=g12206;Name=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS mRNA 210 3642 . + . ID=g12206.t1;Parent=g12206;Name=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 210 275 . + . ID=g12206.t1.exon1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 210 275 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 734 1078 . + . ID=g12206.t1.exon2;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 734 1078 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 1302 1490 . + . ID=g12206.t1.exon3;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 1302 1490 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 1843 2025 . + . ID=g12206.t1.exon4;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 1843 2025 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 2252 2385 . + . ID=g12206.t1.exon5;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 2252 2385 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 2522 2690 . + . ID=g12206.t1.exon6;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 2522 2690 . + 1 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 2842 2977 . + . ID=g12206.t1.exon7;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 2842 2977 . + 0 ID=cds.g12206.t1;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 3317 3642 . + . ID=g12206.t1.exon8;Parent=g12206.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 3317 3642 . + 2 ID=cds.g12206.t1;Parent=g12206.t1 #PROT g12206.t1 g12206 MFRDNKFITCFASLIMSQTGSALRMAAPKPTPFTHDNGGSPAHTRSLAPLYAAFPATREINPHQWDSKMMHWRRRLVCDCATGALEGGGGENAICTTDTAALSAAAHSPRAVSFDAGGIVRHYTTGGVVPLGLDTVLASMESTGDVLREGDYTSTMSSPSAWGPWLVNSFVRKPLTWALGHVVRPGNALSGRFVVRELVETAAQEILDRHWDTAIHGTDGVMPYTRFVALSHLPAPDAAHVLAWLVSSRKAAVFTLDSGEKMVKLCEAKDSVVAPPSDVDRGIARLELATAAVQAQVDKLHAEVDRLRGLARVAAVEGKKSVGVFSLKRAYAIEAMASNKLGVLANLADLLTKIQSAETDAKALEALGIGARALKLTTTSADKADRVMADVQDAFDDHNEVEEAFRTGFPQMESVDEAELEAELEALCAEQSQPSTLRPASAAPPLASPSDDTLADSLSRLTLAQKTDLTTASPNSTQRALDSAPNVPQGEPRAAPTLTLRAKEAPSKDAQVALF* # ORIGINAL: g12205.t1 original gene structure, not modified by PASA NODE_2538_length_5978_cov_37.4633 AUGUSTUS gene 8 70 . - . ID=g12205;Name=g12205.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS mRNA 8 70 . - . ID=g12205.t1;Parent=g12205;Name=g12205.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS exon 8 70 . - . ID=g12205.t1.exon1;Parent=g12205.t1 NODE_2538_length_5978_cov_37.4633 AUGUSTUS CDS 8 70 . - 0 ID=cds.g12205.t1;Parent=g12205.t1 #PROT g12205.t1 g12205 MPDLELKVLAVETPGGRKGGE # PASA_UPDATE: g12207.t1, single gene model update, valid-1, status:[pasa:asmbl_4517,status:12], valid-1 NODE_2538_length_5978_cov_37.4633 . gene 3950 5856 . - . ID=g12207;Name=g12207.t1 NODE_2538_length_5978_cov_37.4633 . mRNA 3950 5856 . - . ID=g12207.t1;Parent=g12207;Name=g12207.t1 NODE_2538_length_5978_cov_37.4633 . five_prime_UTR 5818 5856 . - . ID=g12207.t1.utr5p1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . exon 5787 5856 . - . ID=g12207.t1.exon1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . CDS 5787 5817 . - 0 ID=cds.g12207.t1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . exon 5220 5639 . - . ID=g12207.t1.exon2;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . CDS 5220 5639 . - 2 ID=cds.g12207.t1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . exon 4379 5100 . - . ID=g12207.t1.exon3;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . CDS 4379 5100 . - 2 ID=cds.g12207.t1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . exon 3950 4228 . - . ID=g12207.t1.exon4;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . CDS 4097 4228 . - 0 ID=cds.g12207.t1;Parent=g12207.t1 NODE_2538_length_5978_cov_37.4633 . three_prime_UTR 3950 4096 . - . ID=g12207.t1.utr3p1;Parent=g12207.t1 #PROT g12207.t1 g12207 MSKSLLPFKVADLSLAEWGRAELELAENEMPGLMQMRRLYGESKPLKGARIAGCLHMTIQTGVLIETLTALGAEVTWSSCNIFSTQDHAAAAIAKTGIPVYAWKGETDDEYLWCIEQTIIFPDGQPLNMILDDGGDLTQLVHSKYPHLLPGIKGVSEETTTGVHGLYKMHKQGLLKMPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAASLRHMGARVIITEVDPINALQAAMEGFEVITMEEAVHKGNIFVTTTGCRDIIVGEHFAHMKEDAILCNIGHFDVEIDVAWLNANSVKKQNIKPQVDRYTLANGRHIILLAEGRLVNLGCARGHPSFVMSNSFTNQVLAQIELWTNPGKYPIGVFMLPKSLDEQVAAAHLEQLGVKLTTLSGKQADYLGIDTKGPFKPDHYRY* # ORIGINAL: g5615.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 2780 4108 . + . ID=g5615;Name=g5615.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 2780 4108 . + . ID=g5615.t1;Parent=g5615;Name=g5615.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 2780 4108 . + . ID=g5615.t1.exon1;Parent=g5615.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 2780 4108 . + 0 ID=cds.g5615.t1;Parent=g5615.t1 #PROT g5615.t1 g5615 MGKEIIESIRAQRRRIRHAMERRLADPEDDCVLVTSEDDHDDANAFWGPLFQHYFVESHDDSRDDMLFFVKNAVGWGDGRSKSVAASRDNSSDETLADESANDPYFVRRKNGRKALPSPTSARINWEESFYLNLIVNQFEYTLTVAICKQDSSGKLRCLSRVSQRVYGSPSRRQMHMTDKAVETELTYPLIYFTVDNFDDIFGEVFVQQEESLCVELVACTSIITRDVPPSTSSPSLSRSLSATGAAVHSADSSPGGVAHVTHAATPAPSSRPIRSTIFQGQVGFPALRQAYCAKQREGASLLSTRSRMEYLLLRGPGGKGGAQVAMGPTTRDPKQLATPRGKMLAESTSAGQGGVLPSPASSQSSMASDAGGVGGLFSGALSSIKRISQTLWKTEEPESYTALNSFLTYVSIPWHTVIDDVLDKHPAPILERMKMHAQVSQ* # PASA_UPDATE: g5617.t1, single gene model update, valid-1, status:[pasa:asmbl_3700,status:12], valid-1 NODE_217_length_31011_cov_41.5533 . gene 6456 11498 . + . ID=g5617;Name=g5617.t1 NODE_217_length_31011_cov_41.5533 . mRNA 6456 11498 . + . ID=g5617.t1;Parent=g5617;Name=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 6456 6593 . + . ID=g5617.t1.exon1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 6456 6593 . + 0 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 6845 6940 . + . ID=g5617.t1.exon2;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 6845 6940 . + 0 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 7231 7625 . + . ID=g5617.t1.exon3;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 7231 7625 . + 0 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 7832 8528 . + . ID=g5617.t1.exon4;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 7832 8528 . + 1 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 8933 9991 . + . ID=g5617.t1.exon5;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 8933 9991 . + 0 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 10535 10932 . + . ID=g5617.t1.exon6;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 10535 10932 . + 0 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . exon 11263 11498 . + . ID=g5617.t1.exon7;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . CDS 11263 11344 . + 1 ID=cds.g5617.t1;Parent=g5617.t1 NODE_217_length_31011_cov_41.5533 . three_prime_UTR 11345 11498 . + . ID=g5617.t1.utr3p1;Parent=g5617.t1 #PROT g5617.t1 g5617 MASTANAEPPPTMDQFFTAINAAVVNVQNGAMQKEADAWLLKFQRTIYAWPMSDQVLVMRSSVPEPISVFAAMTIRNKVRASFDELSQETHTSLRDAIVSHLEHFVQKRNVSEHLCTALADVALLMSGWRCPVRDLVGRCRQQQELVPGIVDVLRLIPEELDSDTLKIPDSRRSAVSGELAEDAVTVHEFLVDCLAIAPPGSALRTKIYRNWIKFNAFTDTLMYNSRLLQEAVVSAQSAGSSDFEQACLVITEALLFSSIADNFPNLYVGLPTLVFQFEPVYRAAVENKDDETAAGLARVFTDLGISRIDGILLDELPSALAVNIFRLLVSIAGHSAVCVAKEPIMFFRQFVDMMKRMAPTVDGRPNDAVWQDAQCGRWRAYFFQLLQTMMERSRYKPNYTPDDEDDDFENYRSDVYFCVRRAVGYVLGYDSTFAAVWNIAKTFPPLWTSYEIAINLLDAVCDKVTYDDGKVSDGSADCLSALAEVAQTLFAKPMPFANVRPIMKNAIHYIGGVSKWIHNNSQYLMPAFELVIGAISSPDCISRDATESLADLCKDCGDIMAMSGGEYVRVVMEIGLAVDSLRFKNEKERMAKTDIYKSVAYVINCVPTIEDRCRAIETVCGNTFASLRAIAMSSSVTDAKNDPALLLLDLLSEFFRELTPLKYNAPHPLEPVVREMWAITEMLAPSALFYERLSEKLIRCLRLALQKLGPAAVVFVPIVAQKAVEWYTFRAYSCFLYLGTTLVDLTGALPGYGPGFIDMLRMFSDVTFARFTSPSVVESEYELFEDYAALVKKMLAECPFDLLPSPELSRALSFMATSMQFLTVDQAAERISAAMNELGLLARPTEPTSALAVGVLRAHVTAIMQGIVGAAVERAPWRVIENMASIAFMLMKVLPEEYASSVQALVASLPDNVCSPDTKMEIVRGFAENTDQIYRSLKTISSCVISARNRGMP* # PASA_UPDATE: g5621.t1, single gene model update, valid-1, status:[pasa:asmbl_3699,status:12], valid-1 NODE_217_length_31011_cov_41.5533 . gene 28299 30897 . - . ID=g5621;Name=g5621.t1 NODE_217_length_31011_cov_41.5533 . mRNA 28299 30897 . - . ID=g5621.t1;Parent=g5621;Name=g5621.t1 NODE_217_length_31011_cov_41.5533 . exon 30786 30897 . - . ID=g5621.t1.exon1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . CDS 30786 30897 . - 0 ID=cds.g5621.t1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . exon 30437 30570 . - . ID=g5621.t1.exon2;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . CDS 30437 30570 . - 2 ID=cds.g5621.t1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . exon 30155 30269 . - . ID=g5621.t1.exon3;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . CDS 30155 30269 . - 0 ID=cds.g5621.t1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . exon 29522 29829 . - . ID=g5621.t1.exon4;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . CDS 29522 29829 . - 2 ID=cds.g5621.t1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . exon 28299 29250 . - . ID=g5621.t1.exon5;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . CDS 28720 29250 . - 0 ID=cds.g5621.t1;Parent=g5621.t1 NODE_217_length_31011_cov_41.5533 . three_prime_UTR 28299 28719 . - . ID=g5621.t1.utr3p1;Parent=g5621.t1 #PROT g5621.t1 g5621 MATLTALLSRSSGDGPKEPKQRSRDDLSTGDAFYFYQASDGQHVYLHPVNSRCLADEYGALSGCPESISGKVVELEEVTQLEEMRRRYRFLSHLPLSCEYTFCEVDLKHVLSKETMATHQEELLRRKTRRQNKIRQEKTREKRLQEASQTPRMTSDINSTRDFPSAATFGGDSLSAHYSAASLPSLVGRGGFPGDGPVVVYRNAGSGEEGVFDEYVQDIPKDEGYVAPSFSQAVRAGYMSNHDDNPSVAELTKKDLLQHSQPLPDPSSFPKPSTARGPTGAWGASGGSIATRIQQTPNVSANQATWGARAATAGRDSRQYGHGALGGAAGGGDGDSDGFEPPSYQSSFSDSVSRALSSAQAVAAASSDGPSGEGEAASASGKGKKKKLVLFSTSAARKY* # ORIGINAL: g5616.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 4949 5338 . - . ID=g5616;Name=g5616.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 4949 5338 . - . ID=g5616.t1;Parent=g5616;Name=g5616.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 4949 5338 . - . ID=g5616.t1.exon1;Parent=g5616.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 4949 5338 . - 0 ID=cds.g5616.t1;Parent=g5616.t1 #PROT g5616.t1 g5616 MDHLWTEMKRDATCENERLIQLLLVEPVRVRNHIYKTFQLDESTQRRLRTAIRRKQNTLAQRQCRDRRRSTRGSRKSGALDANGSPRKRPHHDDGDQLHSSSNSHSGDTTDTDSEGEQNDRSSSDGCDR* # ORIGINAL: g5618.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 12027 13865 . - . ID=g5618;Name=g5618.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 12027 13865 . - . ID=g5618.t1;Parent=g5618;Name=g5618.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 12027 13865 . - . ID=g5618.t1.exon1;Parent=g5618.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 12027 13865 . - 0 ID=cds.g5618.t1;Parent=g5618.t1 #PROT g5618.t1 g5618 MEIIPIGSQELSVPLPDYGYAACLGFEFESSQGSGSNSEDFSAAAIVSRLDHICVADSSNDNNSNNSEDVCDDASELIDDDCEECRAGRPHHASKGACDEHDVSMYFSDVFKPADLSLYNELDEDDETSRKRLRCDEEIDAILFDINDPLEDIHLRKVRRSDDRYETSCALSGEARESSRKDEAWDLPIVTSAPLSCETTIPNEMMGNEELHTQSPVDWEYGTGRSADAATTIGEMAMSSSVSDTHAAFSDRTGQPCWRDAVPLSLESMLITDISMFRVPRLNGDDQRSAKGALDGPLASEVHAAASQLLHTSPADSARGCRAGRSKKAAVANKARARPSKSESAKTSPARFQRACEIARRATDKQRSEEQGSAMDTAADAPAHRHDDCRTSRMRTCHAMKGVTDVAASSVVPGHVETSNELPGISAVPGTPESSDEHTHEMDADAAREEEIIVSRREWREGAVRLHVSCAAVLGTRRPANEEVGERPAPDWTSLDVVHHRPTIVSELMSVPECTQDVNIDAVLLVDSLGVYLELTDRFVRKELFVLAGLSCGQEAMIRISLRRAKMRTAKRAQRSREKTNALNALMGITLPVPVERPAKNHGRKARGHADH* # ORIGINAL: g5614.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 76 1014 . - . ID=g5614;Name=g5614.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 76 1014 . - . ID=g5614.t1;Parent=g5614;Name=g5614.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 925 1014 . - . ID=g5614.t1.exon1;Parent=g5614.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 925 1014 . - 0 ID=cds.g5614.t1;Parent=g5614.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 76 450 . - . ID=g5614.t1.exon2;Parent=g5614.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 76 450 . - 0 ID=cds.g5614.t1;Parent=g5614.t1 #PROT g5614.t1 g5614 MYFHRFYSRNLYTSIDPFCLAPTCVFVAAKVEEFGPVQTATVLGVFQQTLRQDFPFLSVPQMTIFGAQDITEAEFFLLEAMECYVIVHHPYRTLTQIVADATQLLEPYQAIAWKVINDSYHTDMCLTVPPHMIALAALYIAAMDDGQGRMGEPSQ # ORIGINAL: g5620.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 25614 27028 . + . ID=g5620;Name=g5620.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 25614 27028 . + . ID=g5620.t1;Parent=g5620;Name=g5620.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 25614 25845 . + . ID=g5620.t1.exon1;Parent=g5620.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 25614 25845 . + 0 ID=cds.g5620.t1;Parent=g5620.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 26001 27028 . + . ID=g5620.t1.exon2;Parent=g5620.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 26001 27028 . + 2 ID=cds.g5620.t1;Parent=g5620.t1 #PROT g5620.t1 g5620 MASGHGRGTTRAPTATNDRLGRTNGDALAGNVSETNNGGASVLLRAPPSSSVVDDDPDRALWQSFQTAAGHVTNLYRESQKQQRRMYASGAADALDDVLMWAKQQMGGGVGSVLPVGHVHATQSSPRRSVPAHVTSGGHHLPRPHNYHSGTGDGHSWGVRGAFGGSDGAGDGNSEFSPASPQLHAAGSTHNNSCNNNSGSISGNSGNNCHGGVLRGVPGTEYVRIDAVVQFVQSLVERYAAPDAPCKRDSDAIVAGAVGNMSLGNTRSSGAHGTAPLAAPPAAAAAGSIAGDQSTAPHLHASLLHHINGNGNNNASSFSDGINLCDSTVRMPAPALTLSTMQQTGPGRRPLAGHMDHVGCGGAVDVDGNEHASLCHNRKRPREHTGPCDGRECQCECDVGAVFGGACDCLMSKRWRHFE* # ORIGINAL: g5619.t1 original gene structure, not modified by PASA NODE_217_length_31011_cov_41.5533 AUGUSTUS gene 20346 25171 . + . ID=g5619;Name=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS mRNA 20346 25171 . + . ID=g5619.t1;Parent=g5619;Name=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 20346 20936 . + . ID=g5619.t1.exon1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 20346 20936 . + 0 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 21221 21505 . + . ID=g5619.t1.exon2;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 21221 21505 . + 0 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 21854 22544 . + . ID=g5619.t1.exon3;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 21854 22544 . + 0 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 22865 23082 . + . ID=g5619.t1.exon4;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 22865 23082 . + 2 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 23422 23536 . + . ID=g5619.t1.exon5;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 23422 23536 . + 0 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 23756 23804 . + . ID=g5619.t1.exon6;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 23756 23804 . + 2 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 24030 24218 . + . ID=g5619.t1.exon7;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 24030 24218 . + 1 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 24473 24606 . + . ID=g5619.t1.exon8;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 24473 24606 . + 1 ID=cds.g5619.t1;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS exon 24729 25171 . + . ID=g5619.t1.exon9;Parent=g5619.t1 NODE_217_length_31011_cov_41.5533 AUGUSTUS CDS 24729 25171 . + 2 ID=cds.g5619.t1;Parent=g5619.t1 #PROT g5619.t1 g5619 MVQSATGSAERARALPDGEASGAMLRVRATVLAPIALSYAAARMGQPAIGSLECVRALRGGMAPTATLRVPTTDSESTATVPATAKTVRHATVSRGCVRARRGGRGKSAMLLVRATASVSTALSNVAARTEHSVIDILECARVLQDGVAPHAMLRAPSDTTGQTVPLRVRAATVAATTSMALARARKDLGFTGRRAHSYGYACQKFCSCENGAACNASTGDCTCAFGWKGTLCNVVIPPSSPKVNATAEVSQYRIGIRLRWSHDEVGPRTWNTPGWRYEISRTGCYPMLFHVVDDALTFLDTNVVIGQGYTYYVRAYNSRNVSSAPSAPAGIESLQKAEVPLPPYNISSTPTLNPDNQQPMIKFTWKEDTSSGPITNTFIFRDHLLILEGQTATEYKDRNVVFGRKYDYEIISANQYGNSTTTSFSETASVGPADQAGTPTGGLSSSSGSVAGPVAGGIIGAIVGAAGVVFGILFVRKQTLRKSMAALAQSELNLIDTVVRRPEIAEIEIPGTCILLRNRIGEGEFGEVFLADVSPRNGSPGVVIKAAVKTFKVTSLSTVDEIRSARSAFMAEIDLMRTIPTHANVIELIGVCTQSEPNCMILEFAAHGDLRHFLADSNASDFSATDLLCFCMDVARGMEHLAKCEIVHRDLAARNCIVVAGPRGPNTLERGWKLSAKAQVIVKVADMGLSRDTATSGDYYVAKTRRKLPVKWMAPESLDRRLWTHASDVWSFGVVMWEVFARGAKPYPGIENHAISTYLSQNKRMEPPWDCPSVASAAMEACWRKHAETRPQFSQLVLQLRRGMAVMCGIEGGGGVGGVGLKPDNSTTHLHPSAVGGTVSSKHSARQPEAFALTPSKGAFAETAVSVAPVGEDAGVYTLENVMFYKDGDSTSCGAYDNDSSIA* # ORIGINAL: g3126.t1 original gene structure, not modified by PASA NODE_6596_length_538_cov_28.5551_potentialcontaminant AUGUSTUS gene 2 538 . + . ID=g3126;Name=g3126.t1 NODE_6596_length_538_cov_28.5551_potentialcontaminant AUGUSTUS mRNA 2 538 . + . ID=g3126.t1;Parent=g3126;Name=g3126.t1 NODE_6596_length_538_cov_28.5551_potentialcontaminant AUGUSTUS exon 2 538 . + . ID=g3126.t1.exon1;Parent=g3126.t1 NODE_6596_length_538_cov_28.5551_potentialcontaminant AUGUSTUS CDS 2 538 . + 2 ID=cds.g3126.t1;Parent=g3126.t1 #PROT g3126.t1 g3126 VQSVGAKVQAGEIDMVIHNGDISYADAYMVHWDMFMRKISTAFGAYAPYMTNPGNHESYANFTAYKTRLAMSMPSDSNTLEGAMYYALNIGPTKILMMDSETPNGDADLPATEMAWANAELSTQDRKTQPWALVFQHRPLYCNAHGHDCKQNAYLLRLQAESTYLNNKVDLVGAAHVH # PASA_UPDATE: g11131.t1, single gene model update, valid-1, status:[pasa:asmbl_162,status:12], valid-1 NODE_1042_length_14451_cov_41.416 . gene 141 3064 . + . ID=g11131;Name=g11131.t1 NODE_1042_length_14451_cov_41.416 . mRNA 141 3064 . + . ID=g11131.t1;Parent=g11131;Name=g11131.t1 NODE_1042_length_14451_cov_41.416 . five_prime_UTR 141 142 . + . ID=g11131.t1.utr5p1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 141 248 . + . ID=g11131.t1.exon1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 143 248 . + 0 ID=cds.g11131.t1;Parent=g11131.t1;5_prime_partial=true NODE_1042_length_14451_cov_41.416 . exon 421 479 . + . ID=g11131.t1.exon2;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 421 479 . + 2 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 672 1120 . + . ID=g11131.t1.exon3;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 672 1120 . + 0 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 1239 1531 . + . ID=g11131.t1.exon4;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 1239 1531 . + 1 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 1631 1695 . + . ID=g11131.t1.exon5;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 1631 1695 . + 2 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 1858 1948 . + . ID=g11131.t1.exon6;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 1858 1948 . + 0 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 2126 2223 . + . ID=g11131.t1.exon7;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 2126 2223 . + 2 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 2380 2494 . + . ID=g11131.t1.exon8;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 2380 2494 . + 0 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 2614 2708 . + . ID=g11131.t1.exon9;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 2614 2708 . + 2 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 2809 2882 . + . ID=g11131.t1.exon10;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 2809 2882 . + 0 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . exon 2976 3064 . + . ID=g11131.t1.exon11;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . CDS 2976 3033 . + 1 ID=cds.g11131.t1;Parent=g11131.t1 NODE_1042_length_14451_cov_41.416 . three_prime_UTR 3034 3064 . + . ID=g11131.t1.utr3p1;Parent=g11131.t1 #PROT g11131.t1 g11131 YLFKGMSALFAVVAIADLIYFVYGSFAPDASVSSGDATPFASTSRDRSLISGSYSPSRKPSTPTSVVSKYRFGSASNTPQAAPPATPASIAAGMAALAGTPVTAMPRSAPSSGARQSTPKAYAAGTPSSSTPRTPIGSTVLTSVMTAAGIAKESPRSPVLGDPITDSRGLRRLLASDTTTLGQDGADQYTMMGDQGGMHSLGMDRTTYVAAQPYHTAKWSVDAAASARGARATGPGTDKSSLLTTIADAKLTNRVANKNILESHVEGCRRWLAKAVLQPLVAAIDANNKAFAACGRTDLVVGVAASSTALNPSLQQQLRQIAPNEPLAMQRLRIERYLEVIGATSQEYLVHRIKELASGGCLASFRWDSGGAWKGSPWITDLPTDSQIVIHLFCTHMDILLPEDPRFANGRPFTSQYYVVTPNVPDKSAHDFCIYQSQTHPPVFKDVTREGVLEIQQGRNNLFHAILAFVNFVRLERSGYLGVINLRAYLGDLMSVFDQE* # ORIGINAL: g11132.t1 original gene structure, not modified by PASA NODE_1042_length_14451_cov_41.416 AUGUSTUS gene 3749 4303 . - . ID=g11132;Name=g11132.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS mRNA 3749 4303 . - . ID=g11132.t1;Parent=g11132;Name=g11132.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS exon 3749 4303 . - . ID=g11132.t1.exon1;Parent=g11132.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS CDS 3749 4303 . - 0 ID=cds.g11132.t1;Parent=g11132.t1 #PROT g11132.t1 g11132 MLSCWCAQPAGRPTFAELAAYFDGFHESKRMESQKSAALTNGGTLLNILSPGAQLRDRAGIRTQLTVSTTDDMQENLAKQRNTTDVDGKLLQKLYDNKMENTPSNPYVGFNDVPWDQVDSSEGEGRQLSRGLRNHESAYANDPECSAFSNENVESHNSDYVHLSSGSVHNALQTIAVEIRDSDV* # ORIGINAL: g11133.t1 original gene structure, not modified by PASA NODE_1042_length_14451_cov_41.416 AUGUSTUS gene 6266 14139 . - . ID=g11133;Name=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS mRNA 6266 14139 . - . ID=g11133.t1;Parent=g11133;Name=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS exon 7126 14139 . - . ID=g11133.t1.exon1;Parent=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS CDS 7126 14139 . - 0 ID=cds.g11133.t1;Parent=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS exon 6608 6703 . - . ID=g11133.t1.exon2;Parent=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS CDS 6608 6703 . - 0 ID=cds.g11133.t1;Parent=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS exon 6266 6340 . - . ID=g11133.t1.exon3;Parent=g11133.t1 NODE_1042_length_14451_cov_41.416 AUGUSTUS CDS 6266 6340 . - 0 ID=cds.g11133.t1;Parent=g11133.t1 #PROT g11133.t1 g11133 MAERNRARPYVSSHSSGPFSRLYGPVRVVFLFILLTAPVFGAIDDAVIRPTGADERVSLEFALRRIRLQIESGERDITAALSPGVHEWTATHSKLFIPSGVNVTLFGSIGQNGLLPSASEERVVVVGSTVAINSPPAATNGTFVVESGATLTLVGLTFEDMRGTIVRVSEGGMLGVMTCAFRWTQDYASLPSTNHSSSGADAESALHVLGSAHLNYTMFDNIGHVDAATALVNGVNRDIAYDFTEWDNTSESRAHVRVGSRGALLGTVCTFSGGSEVVAAFGNSRVSLDGCEFKGCTHRCVVASENATVAIEGGTAVLSESGGAFVSAVGETRVYLTGVHVSNGIYERLRYVNESVQGQEGWLSECAAIVVSGHAMVDAIDLSVTLGSCRVFVLSGMAAVTLKGFVAAVEAASHVMMVSHASSVSVMDSSIECGNVMMAVSLSGTTAFSIARSSMNGTRLFTMSETATLAMDGVEVRIGSTEVSSEDEHAFVLVGEASASVQGCRISSKVKRHVGYHSSHSFFLEESSRLNISYTKVFDVAGVVAASGKSAVIMLSVDVMGSRLMPWENLEFSDQLDDAIEGSDIVRGGVVVLEGSAVLYVAECLFQWLSTVDEGGVVYAVGQSRATMVDSIVRGAGGRCAKGGAFYIDEHSEINVSNSKFEGIRAMFEFVLQNLITKDCWGGFAIVRGDSVLRVDNVEIRKPQAKIGAIFYESGNGQVIARNVSFESAVASDRAGVAFVSEGASLDVVGLRGVDAWADAEGAIFMASDAASVTAVDVHVTTVAAYRGGLVSVMGSAVVSIHDAVVRGIKVRNHFLLAVIFGEREDSTESAEIALAGVTPIGGVIYAGERATLRVTGLVTSQVESDWLGAIVGVADSTVVVLSDVHAYDIVAEGNGGAVYAMGSSSLTMDGVRVNRVAVNGHGGFLYASGRARITMRNAEVGHSTSVRNGGVLYITDSAVVNLWNAVVTNASSLGIGGVLYLVRNGTVSMRDSRISESRAKGSGGVLFSLGTSRTMLANTTVVSGTSLEGDGGCLYLAEAASLLISNSTVQSCKCELRGSFLCVTGTSSAWLFTCSLSDGWAGERGGGIFATDATSVLMRTGTVSDTTSMEGGGFLAAEGESRAQFENCSFRGVRSIGGNGGFVLAYEHSNVTFADGRVEDARCDVGLGGGLYLSDFATAVVSGYSLVGLRSLQNGGIMAQTGASIARLLSCVVENVWSDGAVPGILLRGASVLHTRGLHATNVMRPVGFGEVWLYASEGAAELSDDVRCDNCTARLYNSEKTFYFFLWFSIFPNSELWETSFDVPVRFEDYAERAIADGAATMFMYVGADAIGYTLDTDTSFAIGQVRFTTSFIRVRTTVMMSICLFSDMAGMSIEATGKVVLVDGAFVRTTVEVRGYLNLLTASFDESSSLVVSGDGFVICNECKFYGTSSRRAIDIGAARTGPPVILLGSAIASFMDLVVKSISTVGNGGFARISDYAILQVHTATVGRISASGNGGFVSAEAASGGSYSSQRIAMTNMTIQEAVAGSGGGLIFAAGYTACVMFNVNVITSSAVDSGGLILLDEYASIRMVGVRIGNSGVSGDGGGGGGVIHGRGSPSVSLTNVVVTEGHSSSVGGVISVNPFAVGVDESLPTVSLNGVTVASSYARSGGGLIYTRGAVIDIDGCHFNKAESDGPGGFLQCTGDRSSSIHIRTSMFAASASGTSGGLVNLNDESFVSFADCVGGQFSARIAGGAAIVKGGRLELWRCVIIDMGVARGAGGAFSVEAGVLALVDSTFQRSFAGVGGGFAVIQAVGSALWTNVTIEDADSFYLGGGVCAMSGLGSLVGIGVTVRRSTCFGPGGAFLVDGYASLVLKYSTLLHATSSFGDGGGASIAGKSTAVLSDVLFQDVSSPGVGGAVSSRGESRLTLVRVHIERARSSEGDGGALAAGDKAVVGATNVSVVNASAPTGRGGGLSLSGSAVLFAEGLHLSTVAAYEGGAVAVSKNVAVALVDSVFENADADSNGGCLLALSGSLSIHNGNFTNCRAAKVESTYGTGGFLYVADSAGPGLFVQHATVQGSEAAAGPVVFSTSNLHNTDAYFASATHYNAQYGNGTFASPPARFSVLGADGKAIDAPVSLVTGGYLPTFAVTLADAYRNDAFASPFLPLAIRLSVAEGSNCTISGDLTRTFVLSARVEYIDTSVRVSSPSVPATCVIVFRSGNLLYSDMDALFGTAKLGVGIAPCGDGTALTVEKESGLFVCGDITSSAPLNASGSSTSTIVGVTVGVSAVCLVALVGAYLLVRRARRQWNQKQIDDFARHVQECSPDIAQLELPMDCIELQDELGHGEFGIVYRAQVMFGSTIRMCAAKSLKSGLSVEQRIQFMSEAQIMLNLKHKNVVSLVGVHTTTDPML* # ORIGINAL: g10752.t1 original gene structure, not modified by PASA NODE_1417_length_11471_cov_38.7997 AUGUSTUS gene 5319 6232 . - . ID=g10752;Name=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS mRNA 5319 6232 . - . ID=g10752.t1;Parent=g10752;Name=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 6146 6232 . - . ID=g10752.t1.exon1;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 6146 6232 . - 0 ID=cds.g10752.t1;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 5955 6020 . - . ID=g10752.t1.exon2;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 5955 6020 . - 0 ID=cds.g10752.t1;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 5613 5712 . - . ID=g10752.t1.exon3;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 5613 5712 . - 0 ID=cds.g10752.t1;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 5319 5386 . - . ID=g10752.t1.exon4;Parent=g10752.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 5319 5386 . - 2 ID=cds.g10752.t1;Parent=g10752.t1 #PROT g10752.t1 g10752 MDRPTPRVYGASLPKFVGQNVRAVAEVTGVRDGVASIVLADGTETHIVMDEPTTQFPRFVEFIATVLEDCSLHELTAMPLGDNFDMPNYFQALKISMKFPDIFPIV* # ORIGINAL: g10750.t1 original gene structure, not modified by PASA NODE_1417_length_11471_cov_38.7997 AUGUSTUS gene 101 2818 . - . ID=g10750;Name=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS mRNA 101 2818 . - . ID=g10750.t1;Parent=g10750;Name=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 2733 2818 . - . ID=g10750.t1.exon1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 2733 2818 . - 0 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 2468 2521 . - . ID=g10750.t1.exon2;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 2468 2521 . - 1 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 1969 2175 . - . ID=g10750.t1.exon3;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 1969 2175 . - 1 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 1347 1605 . - . ID=g10750.t1.exon4;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 1347 1605 . - 1 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 915 1191 . - . ID=g10750.t1.exon5;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 915 1191 . - 0 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 385 545 . - . ID=g10750.t1.exon6;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 385 545 . - 2 ID=cds.g10750.t1;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 101 220 . - . ID=g10750.t1.exon7;Parent=g10750.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 101 220 . - 0 ID=cds.g10750.t1;Parent=g10750.t1 #PROT g10750.t1 g10750 MANLLEQSRKLSFLSQPAPAGYVAGLGRGASGFTTRSDIGPARGSEEGAPEEGKWKPKAKPRDEDAEDLNDANYDEEYGYGGSLFSGAPYEEDDKEADAIYDSIDKRMDDRRKERREKRLQEELEKFRAERPKIQQQFSDLKRGLSQLSSDEWDAIPEATGARAKRQKTTRPERYTPVPDAVLLRSAGLGQTTNTAADGMQTSLGGLATSLGVGTPIADLTQIGEARNSVLGVRLDQASETVSGQTVVDPKGYLTDLNSLTPRTDAEIGDIKKARLLLGKVIETNPKHPPGWIAAARLEEVAGRLQAARNIIARGCEKCPTAEDVWLEAARLEIPDNARAIVAEAVKRVPKSVKLWVKATELEMEAKGKRRVLRRALEQIPNSVRLWK # ORIGINAL: g10754.t1 original gene structure, not modified by PASA # ORIGINAL: g10754.t2 original gene structure, not modified by PASA NODE_1417_length_11471_cov_38.7997 AUGUSTUS gene 9545 10785 . - . ID=g10754;Name=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS mRNA 9545 10109 . - . ID=g10754.t1;Parent=g10754;Name=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 10033 10109 . - . ID=g10754.t1.exon1;Parent=g10754.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 10033 10109 . - 0 ID=cds.g10754.t1;Parent=g10754.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 9545 9737 . - . ID=g10754.t1.exon2;Parent=g10754.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 9545 9737 . - 1 ID=cds.g10754.t1;Parent=g10754.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS mRNA 9545 10785 . - . ID=g10754.t2;Parent=g10754;Name=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 10666 10785 . - . ID=g10754.t2.exon1;Parent=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 10666 10785 . - 0 ID=cds.g10754.t2;Parent=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 10033 10400 . - . ID=g10754.t2.exon2;Parent=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 10033 10400 . - 0 ID=cds.g10754.t2;Parent=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 9545 9737 . - . ID=g10754.t2.exon3;Parent=g10754.t2 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 9545 9737 . - 1 ID=cds.g10754.t2;Parent=g10754.t2 #PROT g10754.t1 g10754 MINADATPAEDLLGSHVERWKKERKRLNDALTERMKRCEPSIARLLQQQQLAHGGGVTSGGIGNGDNGGGVSSEDVDSDSDGHVGASPR* #PROT g10754.t2 g10754 MVGIITVLDRRVNAAKFTPKTAPYAILRAWMDNNPDMVQPVPQADDDEDVYPLPGVGAAAAHSELPGEASRTPDVRRTQRTPQKTPKPSAAATTGEQAHPGALPGTPGAPVTASVTASVTAVGNGGRALRPCSLDVAMINADATPAEDLLGSHVERWKKERKRLNDALTERMKRCEPSIARLLQQQQLAHGGGVTSGGIGNGDNGGGVSSEDVDSDSDGHVGASPR* # PASA_UPDATE: g10753.t1, single gene model update, valid-1, status:[pasa:asmbl_1522,status:12],[pasa:asmbl_1523,status:12],[pasa:asmbl_1524,status:12], valid-1 NODE_1417_length_11471_cov_38.7997 . gene 6826 8957 . + . ID=g10753;Name=g10753.t1 NODE_1417_length_11471_cov_38.7997 . mRNA 6826 8957 . + . ID=g10753.t1;Parent=g10753;Name=g10753.t1 NODE_1417_length_11471_cov_38.7997 . five_prime_UTR 6826 6898 . + . ID=g10753.t1.utr5p1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 6826 7000 . + . ID=g10753.t1.exon1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 6899 7000 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 7242 7535 . + . ID=g10753.t1.exon2;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 7242 7535 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 7754 7834 . + . ID=g10753.t1.exon3;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 7754 7834 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 8082 8153 . + . ID=g10753.t1.exon4;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 8082 8153 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 8310 8345 . + . ID=g10753.t1.exon5;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 8310 8345 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . exon 8473 8957 . + . ID=g10753.t1.exon6;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . CDS 8473 8559 . + 0 ID=cds.g10753.t1;Parent=g10753.t1 NODE_1417_length_11471_cov_38.7997 . three_prime_UTR 8560 8957 . + . ID=g10753.t1.utr3p1;Parent=g10753.t1 #PROT g10753.t1 g10753 MVSAIDLSHSESVWLEQSKYEDALSSFEAKKAAKIAGIVTYEELQKENAELKKKLDALTKENATLKSAKPAAAAPAAAAAPAPAKQEEKKAEKPADDDDIDLFGSDEEEDEEAKKVKEARVAEYAAKKGNKPVLIAKSSLLIDVKPWDDETDMVEMERLVRTIQADGLIWGQAKLIPIGYGIKKLQINAVIEDDKISTDFLEENIIGFEDLVQSMDIAAFNKI* # ORIGINAL: g10751.t1 original gene structure, not modified by PASA NODE_1417_length_11471_cov_38.7997 AUGUSTUS gene 3232 4408 . + . ID=g10751;Name=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS mRNA 3232 4408 . + . ID=g10751.t1;Parent=g10751;Name=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 3232 3442 . + . ID=g10751.t1.exon1;Parent=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 3232 3442 . + 0 ID=cds.g10751.t1;Parent=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 3815 3915 . + . ID=g10751.t1.exon2;Parent=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 3815 3915 . + 2 ID=cds.g10751.t1;Parent=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS exon 4154 4408 . + . ID=g10751.t1.exon3;Parent=g10751.t1 NODE_1417_length_11471_cov_38.7997 AUGUSTUS CDS 4154 4408 . + 0 ID=cds.g10751.t1;Parent=g10751.t1 #PROT g10751.t1 g10751 MRGKDDKGNGRTRAEGAEGDEPRGAINDPTDLHRLRIERMMQNPTKPVHIPEAPKERGMRGPRDFNRNVMGSTAGAGSGEFHVYRQLRRYEQNRLKHIEEQADKDISEREFEERRNERKKAEEDRTAKKRAKRMRKKQKAAMKGEPQSRDGSEASAHADKGDKGDKGSDGSEREDDAEERVFKIARRD* # ORIGINAL: g4559.t1 original gene structure, not modified by PASA NODE_1631_length_10106_cov_41.2564 AUGUSTUS gene 4849 8286 . + . ID=g4559;Name=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS mRNA 4849 8286 . + . ID=g4559.t1;Parent=g4559;Name=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 4849 5705 . + . ID=g4559.t1.exon1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 4849 5705 . + 0 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 5861 5914 . + . ID=g4559.t1.exon2;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 5861 5914 . + 1 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 6074 6356 . + . ID=g4559.t1.exon3;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 6074 6356 . + 1 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 6662 6783 . + . ID=g4559.t1.exon4;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 6662 6783 . + 0 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 7044 7163 . + . ID=g4559.t1.exon5;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 7044 7163 . + 1 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 7387 7465 . + . ID=g4559.t1.exon6;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 7387 7465 . + 1 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 7808 7940 . + . ID=g4559.t1.exon7;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 7808 7940 . + 0 ID=cds.g4559.t1;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 8180 8286 . + . ID=g4559.t1.exon8;Parent=g4559.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 8180 8286 . + 2 ID=cds.g4559.t1;Parent=g4559.t1 #PROT g4559.t1 g4559 MKASQTISTILKHMAQSDHTHTSLSHAEPTQGAFAVLTHAKSAAAPRRGVRSNDDKGDSGEDQPAARVADVRLSDAPRRTAVDRRAASHGSGVDVPSVGHINNSSVKAASTAPTPTPTPTVAAGRLTGADSRPDMRGRGSSAESNVSANANANAGVRSGRSSRRSSSPSSSSASSSSSSSDNDDDRGKDMKKLADDLNRAPPARKPAREAVPHVTQRPPATKTAPDTRAPRPKERDAEPADDEDEVDGGKLVSVRVKRDFEKRFFSKKPRNLIVLGDSASDIIIASSLDGSISFRRISVTKREGRRRADEVRVIKKESLRTDKWAEDMAINPQRTTLALAFKVPSQRHRLALIDIRNGMPSENAYKFLSGDAGTDLCGVVRFCTDGTSLVTGCPDRRVLLWNADKYDQPCVLHSGHTAEVTSLCCASDGDSVISGGRDGKVLLYSLRAPGSGTRMIARFENTCHSILECPTDPNILLLGCTRQREQFTLKDLRMKETVRVFGFEEESNISQYMFPSWKPDGTLVTCGDFSGNVHFFDIRSTQSAIVRMHGKRVQCAEWHPRRNRLFTVSSDLALGIHSISIVRE* # ORIGINAL: g4557.t1 original gene structure, not modified by PASA NODE_1631_length_10106_cov_41.2564 AUGUSTUS gene 1748 3448 . + . ID=g4557;Name=g4557.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS mRNA 1748 3448 . + . ID=g4557.t1;Parent=g4557;Name=g4557.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 1748 3448 . + . ID=g4557.t1.exon1;Parent=g4557.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 1748 3448 . + 0 ID=cds.g4557.t1;Parent=g4557.t1 #PROT g4557.t1 g4557 MWSHPRNQNKTHFATAVFCRYIGIGRVTCTYFPTIYNTAIPVRREQSLFRRHVDVIHRSEPRESFVELTRNNTRDELEALYEAQPKAASKQQAVRGGATGRGRGRPPTSARFGRGAGKSHFGKKRGGRRGAIKREPITSDDDDDDDESESEKEGAQDAQHDSDSSCHYMTRQRSRAETRTDSALGQSSPYSRAPQCDVSVDKPPVDEEAAVTSAAIATVSSPLFGEACTFVDMARSDDTSCESGALTDDEAHSAIMEVEGCNDAKMNPDLVTVRAPSTLPSFDTTDDDTTTDHDTGADESEDAVSDKGAADLHRGDIVVTSSPGINWARILWESDSESDGCSGDEDGGSDRKNRAADDSGFIEDSKCGGDTYNDNDDDAASEIFDERGDVHTNNGNTSRRTHTDKDGRATPHDIIYADGRVFLNPLLLELPSHAYLLANNEAPLYGNALDESLRPLAMSESTCGDPYLPFTDTLSPITPRTAVELKQYLASSDLCTSALDIDMGWSPVRGAWPWPTFPPLFKQSAAEGVEPTIMGSRCAAAAPDDSLSVVCMGTQTPTTSPHARRV* # ORIGINAL: g4558.t1 original gene structure, not modified by PASA NODE_1631_length_10106_cov_41.2564 AUGUSTUS gene 3891 4741 . + . ID=g4558;Name=g4558.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS mRNA 3891 4741 . + . ID=g4558.t1;Parent=g4558;Name=g4558.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 3891 4517 . + . ID=g4558.t1.exon1;Parent=g4558.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 3891 4517 . + 0 ID=cds.g4558.t1;Parent=g4558.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 4649 4741 . + . ID=g4558.t1.exon2;Parent=g4558.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 4649 4741 . + 0 ID=cds.g4558.t1;Parent=g4558.t1 #PROT g4558.t1 g4558 MAGFFPQTLLQRSLLRPQRSEEGPRSTDAPIARPNDSANRRNSESNDRIKPGNTPGSHVPVSKHEGIRSDSRASLNSIPDERQGAVLPVHTNNSAADGVRDRGKGRAAEGAVREWTRDLDDNDDDHSVTAAPKRRRIDSSASEALADRYNGPPTLVGTPVAPPLEAQGDGRKPPMDDGASSSTDYESDVSEDPSGVDFSVIESQELMRKLNAARIKFDTYSKKVIVTPTKSFAMRTWLV* # ORIGINAL: g4556.t1 original gene structure, not modified by PASA NODE_1631_length_10106_cov_41.2564 AUGUSTUS gene 49 854 . + . ID=g4556;Name=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS mRNA 49 854 . + . ID=g4556.t1;Parent=g4556;Name=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 49 340 . + . ID=g4556.t1.exon1;Parent=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 49 340 . + 0 ID=cds.g4556.t1;Parent=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 470 576 . + . ID=g4556.t1.exon2;Parent=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 470 576 . + 2 ID=cds.g4556.t1;Parent=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS exon 687 854 . + . ID=g4556.t1.exon3;Parent=g4556.t1 NODE_1631_length_10106_cov_41.2564 AUGUSTUS CDS 687 854 . + 0 ID=cds.g4556.t1;Parent=g4556.t1 #PROT g4556.t1 g4556 NHSPVTSSEISRLKTELEDLSKRQKQISDALDKNMRAMSPAHLGSRPSSSQSNMPHAQHAHGGAHVFGPVAPIADNANDQRKFRKTFGFGGKEAFDHVYLCVLAKSGFGLGTLFIADRLICYKSKGLFKKTLKIKVLIDDLQYVEEVGSSVRLTEITGAVHVFESFSGSLCSQDLYRVVVELWASGAK* # ORIGINAL: g2563.t1 original gene structure, not modified by PASA NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS gene 656 1655 . - . ID=g2563;Name=g2563.t1 NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS mRNA 656 1655 . - . ID=g2563.t1;Parent=g2563;Name=g2563.t1 NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS exon 1389 1655 . - . ID=g2563.t1.exon1;Parent=g2563.t1 NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS CDS 1389 1655 . - 0 ID=cds.g2563.t1;Parent=g2563.t1 NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS exon 656 1096 . - . ID=g2563.t1.exon2;Parent=g2563.t1 NODE_3280_length_3843_cov_45.7558_potentialcontaminant AUGUSTUS CDS 656 1096 . - 0 ID=cds.g2563.t1;Parent=g2563.t1 #PROT g2563.t1 g2563 MAFPFAVQPLEAVVLGLALCFVLRCPNVVAKTAGLSIASTNESATVLVSGTGKSLVLDAGEKGTIWFNSTIDGATVKALLDRIDYLEKTADYWWAIAGNASVLSPQPAPLVSNRDDVNKIFVIRRGSLIELRVSLHSFSTFWSTPMPSTGATAIRINIPTELQPMSDVSVGDVRMISSGDFKNNEAYLWIYLSGKDRPSTARGLFINFVKSSDHSSLNMYGTSATIVFSLFYNLA* # PASA_UPDATE: g5110.t1, single gene model update, valid-1, status:[pasa:asmbl_7846,status:12], valid-1 NODE_5088_length_1031_cov_44.3504 . gene 88 647 . - . ID=g5110;Name=g5110.t1 NODE_5088_length_1031_cov_44.3504 . mRNA 88 647 . - . ID=g5110.t1;Parent=g5110;Name=g5110.t1 NODE_5088_length_1031_cov_44.3504 . five_prime_UTR 578 647 . - . ID=g5110.t1.utr5p1;Parent=g5110.t1 NODE_5088_length_1031_cov_44.3504 . exon 88 647 . - . ID=g5110.t1.exon1;Parent=g5110.t1 NODE_5088_length_1031_cov_44.3504 . CDS 88 577 . - 0 ID=cds.g5110.t1;Parent=g5110.t1;3_prime_partial=true #PROT g5110.t1 g5110 MQQQMTAYGFKDHNNWWLLRRPQNGQNSTDPSIRTGAMAMIEHVATEKGVYMHGYPPPVSKQGDPPLLFEVSVNDDDGHEWEVRVIQHRGEKGPRDATKQRDLLLGSAVRLVRKGGAGVPACAIAASSTRLPDWGFFQFEVTCSVDIETKDTVWIVDEANAAK # PASA_UPDATE: g3596.t1, single gene model update, valid-1, status:[pasa:asmbl_6322,status:12],[pasa:asmbl_6323,status:12], valid-1 NODE_3625_length_3093_cov_34.0729 . gene 109 2976 . + . ID=g3596;Name=g3596.t1 NODE_3625_length_3093_cov_34.0729 . mRNA 109 2976 . + . ID=g3596.t1;Parent=g3596;Name=g3596.t1 NODE_3625_length_3093_cov_34.0729 . five_prime_UTR 109 110 . + . ID=g3596.t1.utr5p1;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . exon 109 410 . + . ID=g3596.t1.exon1;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . CDS 111 410 . + 0 ID=cds.g3596.t1;Parent=g3596.t1;5_prime_partial=true NODE_3625_length_3093_cov_34.0729 . exon 736 942 . + . ID=g3596.t1.exon2;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . CDS 736 942 . + 0 ID=cds.g3596.t1;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . exon 1166 1969 . + . ID=g3596.t1.exon3;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . CDS 1166 1969 . + 0 ID=cds.g3596.t1;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . exon 2127 2357 . + . ID=g3596.t1.exon4;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . CDS 2127 2357 . + 0 ID=cds.g3596.t1;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . exon 2569 2976 . + . ID=g3596.t1.exon5;Parent=g3596.t1 NODE_3625_length_3093_cov_34.0729 . CDS 2569 2976 . + 0 ID=cds.g3596.t1;Parent=g3596.t1 #PROT g3596.t1 g3596 LCIPSNNTSFIIKISEKLAANEPHLTLEYLSECIVGFARSTTELKHLCLDYMAPWLPNLAQYCSTVNVAEGEAASANSVQLRRTREIILNLIEMTINEEEMYPAMQAKVWHVLGRVVPLLDTILDCFAQVAISGGLGTCRSEVLAETTVTLASATLHLVAQKLVSKLRKAVEDSSQKAATALEEHPAWVEISVLARFALMLSFNNRLDVLQTAPDLFHIATMLVASGPILVRASIHGLIINIVQSLCTTLQDLPEDVNRQLRLQLADFAQPKYHLLFGISSAGGSAATAAFDVMHARSDKGMERISLNSTETIISAFVDIVDVLSPHIPSELGIQMGGWHARWWDLTCRTALQPNPALQPRAFVALGVLAKAVDDDLIAKVLRVLADSLSTGHMDADLLSSILMCLTRLLALLPRESKYHGLLFWVAVTVAQMGDTQAFPVAMSLMEATLRTSDSHGLFERAPLERVLLNARIPFESTCAKIEQAVGVSFKTDFAFATAVSIVKGFRHPMPTTEGLTSRVLACLVDIRRRTGAVPTSAPAMSLSPSLTNMAGVEQQHRLIPEILGYLAVGLPVSTDLRQVVLHGSGNAADQSGQYRSILGACGDTTTALLLLVTSVNMLASIETDAQKLFIYGLLAEAASVHRDIFPAM* # PASA_UPDATE: g12592.t1, single gene model update, valid-1, status:[pasa:asmbl_6306,status:12], valid-1 NODE_3610_length_3121_cov_78.1871 . gene 203 2572 . - . ID=g12592;Name=g12592.t1 NODE_3610_length_3121_cov_78.1871 . mRNA 203 2572 . - . ID=g12592.t1;Parent=g12592;Name=g12592.t1 NODE_3610_length_3121_cov_78.1871 . exon 2147 2572 . - . ID=g12592.t1.exon1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . CDS 2147 2572 . - 0 ID=cds.g12592.t1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . exon 1784 1936 . - . ID=g12592.t1.exon2;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . CDS 1784 1936 . - 0 ID=cds.g12592.t1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . exon 1222 1382 . - . ID=g12592.t1.exon3;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . CDS 1222 1382 . - 0 ID=cds.g12592.t1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . exon 851 943 . - . ID=g12592.t1.exon4;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . CDS 851 943 . - 1 ID=cds.g12592.t1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . exon 203 752 . - . ID=g12592.t1.exon5;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . CDS 287 752 . - 1 ID=cds.g12592.t1;Parent=g12592.t1 NODE_3610_length_3121_cov_78.1871 . three_prime_UTR 203 286 . - . ID=g12592.t1.utr3p1;Parent=g12592.t1 #PROT g12592.t1 g12592 MQRTVHAAAHYGGCALFSRSAAASSSVAWKRLQRRASLQLTVGSQVHLPSRAFATSHIGDNCPAATCKHTPMDLKSAVAALKKYAPTEFAEKWDNVGLLVEPSSPRPLERVLLTIDLTGDVLEEAIEADVQLIVSYHPPIFQASKSICCRTPKDRTIVRAVERGIAVYSPHTTLDVKKGGINDWLASCFSASKVVPIQPLMLVGPTVDGLPSSTHKKHTHVVAAEIDPSKVATVCAALPQGVQVAFRAHPGDAGPAVAHVEIPCDAGSLGQVVASLARLSASDMSSYRVTSLTTAPVEGAGIGRKVTLATPLSFDDVVQTVKSHLNLPHLRIAQPRTEQGSESVVVRTVALCAGSGGSVLAGVDADVYLTGEMGHHEVLAAVADGTRVVLCEHTNTERGYLGAVLANDLRGLFGPGVDVRVSARDCDPIVIV* # PASA_UPDATE: g10728.t1, single gene model update, valid-1, status:[pasa:asmbl_6988,status:12], valid-1 NODE_4118_length_2163_cov_32.1379 . gene 195 1932 . + . ID=g10728;Name=g10728.t1 NODE_4118_length_2163_cov_32.1379 . mRNA 195 1932 . + . ID=g10728.t1;Parent=g10728;Name=g10728.t1 NODE_4118_length_2163_cov_32.1379 . exon 195 289 . + . ID=g10728.t1.exon1;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . CDS 195 289 . + 0 ID=cds.g10728.t1;Parent=g10728.t1;5_prime_partial=true NODE_4118_length_2163_cov_32.1379 . exon 492 608 . + . ID=g10728.t1.exon2;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . CDS 492 608 . + 1 ID=cds.g10728.t1;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . exon 933 1103 . + . ID=g10728.t1.exon3;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . CDS 933 1103 . + 1 ID=cds.g10728.t1;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . exon 1530 1932 . + . ID=g10728.t1.exon4;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . CDS 1530 1656 . + 1 ID=cds.g10728.t1;Parent=g10728.t1 NODE_4118_length_2163_cov_32.1379 . three_prime_UTR 1657 1932 . + . ID=g10728.t1.utr3p1;Parent=g10728.t1 #PROT g10728.t1 g10728 QLDELYKLLNENYVEDDDMMFRFDYSPEFLKWALQPPGWKPIWHCGVRVSTNKKLVGFISGVPANLRVSTHQQVLVEINFLCVHKKLRSKRLAPVLIKEITRRTHLQGIFQATYTAGIVIPSPIAGCRYWHRSLNPKKLIEVKFSQLARNMTMQRTIKFYKLPEVSYLC* # ORIGINAL: g13191.t1 original gene structure, not modified by PASA NODE_2026_length_8039_cov_41.5954 AUGUSTUS gene 1794 5037 . + . ID=g13191;Name=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS mRNA 1794 5037 . + . ID=g13191.t1;Parent=g13191;Name=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS exon 1794 3730 . + . ID=g13191.t1.exon1;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS CDS 1794 3730 . + 0 ID=cds.g13191.t1;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS exon 4038 4238 . + . ID=g13191.t1.exon2;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS CDS 4038 4238 . + 1 ID=cds.g13191.t1;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS exon 4352 4573 . + . ID=g13191.t1.exon3;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS CDS 4352 4573 . + 1 ID=cds.g13191.t1;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS exon 4773 5037 . + . ID=g13191.t1.exon4;Parent=g13191.t1 NODE_2026_length_8039_cov_41.5954 AUGUSTUS CDS 4773 5037 . + 1 ID=cds.g13191.t1;Parent=g13191.t1 #PROT g13191.t1 g13191 MFGRNKNKELPLTHSRHHHKPFESELDRVQTKNIGVARTRMSTAAEALDRWRHGQLPSNNSLRMAIDKTQDILQTTARKQHIGGEGQRFVDDLDQLMQDVRDLITEKNADEHMQKMALHAIGLSNDIAEASRRAALDGHHAGFVRGVSNEKISRAISDGVVLVNKLIRDDAFRTALQDFISVLKSVQLAAEPTPAETAAATAAAAAAVTEEPRVRIRTSIIDVASSGPSAAPASDVQSSFAATLPMPSAYRQQQAQTPPTAYRSAGGVGSSVRNPGYSASSDRSPGDSYMSSGGAGSSYNTAATGDSYSGTTARPGESALMTEDRAYRSISEQMDESAERYRATYYPESPSQAPQYTGGIRQTVDRDSKLFRPQGHEEYTYGRVPAETAEGAVAGGAGAGGSLVGQQQQQMYEARRPSFAGDDYEEVAKYTFEDPAHQESFQQFWRLLHRVSGDKDTSSAFRRLIKVTKYLEPRKKYMQANVELTGFEARIEQLRRETATLIERFTGGLRLKTYGANLSAVVNAIRADPEQKDSLRQMRKLVYRALNNPSNMYSPRYEYNLSRLFDTLLNRTTAVRQMPQYAAMLKDGGDIISAISNDPMLKTIRADAKRTIDRVFVRDAAGMKLNAQLFRDLKDPLVSILRENLRYIGLPTIQQRVETMVGNFDITASGIVISALDILPEFVTVKLDNKMALNLHNLETNIEDAVTRLVVKFRHIDLHLHDIDMWYRRVRAPHTEGHPLVDINTLGRGMAIMLKVEMRQTQPIFTCKDVVCKIDALTIKSHVPQRDRTFNMITTLFRGRLRRMVEEKIELSLREAITSINVRLNKALTTIPGGKTLPDTVRDSVLADRPRTLQQSHNPAPMLQNAPPRQLITG* # PASA_UPDATE: g13192.t1, single gene model update, valid-1, status:[pasa:asmbl_3302,status:3], valid-1 NODE_2026_length_8039_cov_41.5954 . gene 5397 7489 . - . ID=g13192;Name=g13192.t1 NODE_2026_length_8039_cov_41.5954 . mRNA 5397 7489 . - . ID=g13192.t1;Parent=g13192;Name=g13192.t1 NODE_2026_length_8039_cov_41.5954 . five_prime_UTR 7386 7489 . - . ID=g13192.t1.utr5p1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 7296 7489 . - . ID=g13192.t1.exon1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 7296 7385 . - 0 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 7025 7204 . - . ID=g13192.t1.exon2;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 7025 7204 . - 0 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 6737 6898 . - . ID=g13192.t1.exon3;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 6737 6898 . - 0 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 6443 6621 . - . ID=g13192.t1.exon4;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 6443 6621 . - 0 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 6061 6177 . - . ID=g13192.t1.exon5;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 6061 6177 . - 1 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 5802 5911 . - . ID=g13192.t1.exon6;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 5802 5911 . - 1 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . exon 5397 5684 . - . ID=g13192.t1.exon7;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . CDS 5575 5684 . - 2 ID=cds.g13192.t1;Parent=g13192.t1 NODE_2026_length_8039_cov_41.5954 . three_prime_UTR 5397 5574 . - . ID=g13192.t1.utr3p1;Parent=g13192.t1 #PROT g13192.t1 g13192 MSDTMSAAEGFQTSTGIGLAVRHFESDFHAEHINAPLPQRLRRSDPEALRTPLSTTHATYKGEIPKRVYRNSEYRKAPLSGLINYVETWKFEDVPSNRLNEGSWESEKTAHYQAGRREGRIATTLRRTQSEHGQEVERLRTTLRHGARPLVSEAVNGPPPTTTGTVHRQFSDGEQRDTYAAKDIPTYWSCESYPRAWGHGPRVNPLPATPPHQPSGPMVDSLTFPTRTSIRRVPPSFAHAPNTGLESVMKASYVDPVSQTNPAAHTFEDRRQSLEHSVHATSFGASIQRRSGTYGVPEMYDATNTTYGSFGTATL* # PASA_UPDATE: g3048.t1, single gene model update, valid-1, status:[pasa:asmbl_10180,status:12], valid-1 NODE_9727_length_324_cov_48.6586_potentialcontaminant . gene 2 324 . + . ID=g3048;Name=g3048.t1 NODE_9727_length_324_cov_48.6586_potentialcontaminant . mRNA 2 324 . + . ID=g3048.t1;Parent=g3048;Name=g3048.t1 NODE_9727_length_324_cov_48.6586_potentialcontaminant . five_prime_UTR 2 3 . + . ID=g3048.t1.utr5p1;Parent=g3048.t1 NODE_9727_length_324_cov_48.6586_potentialcontaminant . exon 2 324 . + . ID=g3048.t1.exon1;Parent=g3048.t1 NODE_9727_length_324_cov_48.6586_potentialcontaminant . CDS 4 324 . + 0 ID=cds.g3048.t1;Parent=g3048.t1;5_prime_partial=true;3_prime_partial=true #PROT g3048.t1 g3048 ATAVDPDERHICSGGVAATTFLPPLAPPSSLQVGTDTILPNDLALYIEDNNALPALMGFEGLLCINGSVVIRKNRQLCMYVDPSAWSVLGASSAVIQDAQGRGLCGG # PASA_UPDATE: g7986.t1, single gene model update, valid-1, status:[pasa:asmbl_2062,status:12], valid-1 NODE_1591_length_10316_cov_41.5564 . gene 2869 7699 . + . ID=g7986;Name=g7986.t1 NODE_1591_length_10316_cov_41.5564 . mRNA 2869 7699 . + . ID=g7986.t1;Parent=g7986;Name=g7986.t1 NODE_1591_length_10316_cov_41.5564 . exon 2869 4809 . + . ID=g7986.t1.exon1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . CDS 2869 4809 . + 0 ID=cds.g7986.t1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . exon 5000 6209 . + . ID=g7986.t1.exon2;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . CDS 5000 6209 . + 0 ID=cds.g7986.t1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . exon 6562 6614 . + . ID=g7986.t1.exon3;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . CDS 6562 6614 . + 2 ID=cds.g7986.t1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . exon 6724 7082 . + . ID=g7986.t1.exon4;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . CDS 6724 7082 . + 0 ID=cds.g7986.t1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . exon 7369 7699 . + . ID=g7986.t1.exon5;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . CDS 7369 7690 . + 1 ID=cds.g7986.t1;Parent=g7986.t1 NODE_1591_length_10316_cov_41.5564 . three_prime_UTR 7691 7699 . + . ID=g7986.t1.utr3p1;Parent=g7986.t1 #PROT g7986.t1 g7986 MTMDSTEADDGASPQSVQDIPLSRMHSNACPIPPTRRAGSSSAVEDVGDSASAYGEACDGEDVERLAWSSTSYNNGLGTIFSSALPLRRTEGSADDSHSSGHHGDHQQSWDAQEERNFAEVFGGERVSASSSSRVGRDGRGDCDASRGSRPAYVAASLSSWDSGDPATVQRRHMQSGDDAVLRHSRSQLPRHIHTDTGAEGPSGDWQPNAHVGGVSGMGMRHHGSREGFDRNDLAGHNYGQAYAAQTQPHVPGQPAYTHSPTQSRAPPLTMGVGGAQSYANGPTSHPLRSLSRALPGFGMAEINTFVVVMSANIVAAVLIFVGYCDYVLLKPYISPLLWAVLCSIALRRVRIAVSQIIEWTFGPSLECDYSDDEDYSDGEDMMDGSVLDTTAAMPSPGSPVVLSPARSPRSPRRLHRRASMTMEAMRSSFTVFFDIFRTFVADVRTYSAMMQARVLTLIRDMFEIDLRNADDPTFGDSAVAQDPPKDAFYFRVLFWAGCAFGVYSLVKYSLGVYGTILLSLLLLVALLLLAVSYSCALFFGKVVWPWFRNNEGIHRAIVRFDERLLTVPSQSIRVTWFLMQTFATGVARAWKYLSASIVAHSDSISTVIVMVVLMVGGAVFGTFFMYQCVTEGRGAVDSTVQFLDDQITTSDMHGLFFNRSSLVSTLQGSVTEGRHWIEVHWAQRVRGGNLTLALDALQAAFEAFAPVEQHPDANPPLVVPSGVHAPSPAHVCVSRSSASDDSFIDSYSNGTHYRDAPLAGGENATCAAVSDPPDALPGDKVSEDSAKGGPQQQRLPTNSSSHKKPALFNSIMRRFPATNGLILALADGRVTDVGMKEVGDVVDELRASILVTAREMFGFRSEDEVASAVSQTAAVSGGFGTAMLRHTAFSVAAVVSLLMELFSVMFSYAISGIVFLTTLFHLLRANEDLPYLVFRAFPIGERYKSRISDALSGAVRGLFVSSCKMCFFHAGLTWLTFKAAGLDFVYLAAFFSALLAILPFVGAWWVGVVGATQLLIRGEYISGLFMFSSHVIFGWSADTAIYAGIPSSHPHMTGLSIVLGIYAFDIQGALIGPLLVCITVIAYNLQKDLWESPKSRSSEHLFKGGNSVHGTPTRTRHAPAHGTALAGGEWDPRVSRQNSVDPDPSAYYTADPFLRDRSRRKLNSLDQPVRHSHGSREDSIVPPTVERMARLPSAWTAQLKDPVSARSTAGPNNANIPGAYGGVAVDRTRSVSPQSEHASLHGDDNNDGAKSISMASLSSGATSLDVLSEEPHTVNNYSAPHKSTAECVSQKHC* # ORIGINAL: g7984.t1 original gene structure, not modified by PASA NODE_1591_length_10316_cov_41.5564 AUGUSTUS gene 80 536 . + . ID=g7984;Name=g7984.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS mRNA 80 536 . + . ID=g7984.t1;Parent=g7984;Name=g7984.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 80 196 . + . ID=g7984.t1.exon1;Parent=g7984.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 80 196 . + 0 ID=cds.g7984.t1;Parent=g7984.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 336 536 . + . ID=g7984.t1.exon2;Parent=g7984.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 336 536 . + 0 ID=cds.g7984.t1;Parent=g7984.t1 #PROT g7984.t1 g7984 VRTQESSEFNDTLRAEDHLTDATQSARSKFEVDIHAARITRAGESLLQLISDLKEFLLLNDVTVFNASIRDRVAALEGVSAEISEELKVLSLDMACHLRKLEDAR* # ORIGINAL: g7987.t1 original gene structure, not modified by PASA NODE_1591_length_10316_cov_41.5564 AUGUSTUS gene 8633 10019 . - . ID=g7987;Name=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS mRNA 8633 10019 . - . ID=g7987.t1;Parent=g7987;Name=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 9972 10019 . - . ID=g7987.t1.exon1;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 9972 10019 . - 0 ID=cds.g7987.t1;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 9652 9706 . - . ID=g7987.t1.exon2;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 9652 9706 . - 0 ID=cds.g7987.t1;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 9329 9435 . - . ID=g7987.t1.exon3;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 9329 9435 . - 2 ID=cds.g7987.t1;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 8962 9011 . - . ID=g7987.t1.exon4;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 8962 9011 . - 0 ID=cds.g7987.t1;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS exon 8633 8816 . - . ID=g7987.t1.exon5;Parent=g7987.t1 NODE_1591_length_10316_cov_41.5564 AUGUSTUS CDS 8633 8816 . - 1 ID=cds.g7987.t1;Parent=g7987.t1 #PROT g7987.t1 g7987 MAPKDVDLNPASLSSADYSRDSVELTASVFKKIIGVKKNKSANKRALKDETLANFAEMSFADVCGRIDTKASHLQHRLDSLLDVCAAVAAEDMSLESDSSDTPASNSTTSKRTPSVTAHAPPSKLPMMAELSPHCLLVMRMPAIYTY* # PASA_UPDATE: g7985.t1, single gene model update, valid-1, status:[pasa:asmbl_2063,status:3], valid-1 NODE_1591_length_10316_cov_41.5564 . gene 964 2486 . - . ID=g7985;Name=g7985.t1 NODE_1591_length_10316_cov_41.5564 . mRNA 964 2486 . - . ID=g7985.t1;Parent=g7985;Name=g7985.t1 NODE_1591_length_10316_cov_41.5564 . five_prime_UTR 2330 2486 . - . ID=g7985.t1.utr5p1;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . exon 2120 2486 . - . ID=g7985.t1.exon1;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . CDS 2120 2329 . - 0 ID=cds.g7985.t1;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . exon 1699 1741 . - . ID=g7985.t1.exon2;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . CDS 1699 1741 . - 0 ID=cds.g7985.t1;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . exon 964 1441 . - . ID=g7985.t1.exon3;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . CDS 1236 1441 . - 2 ID=cds.g7985.t1;Parent=g7985.t1 NODE_1591_length_10316_cov_41.5564 . three_prime_UTR 964 1235 . - . ID=g7985.t1.utr3p1;Parent=g7985.t1 #PROT g7985.t1 g7985 MSAAAKESVAEVGKTLIRSLKRPSAIKKNFFDVVNDKPQFGVGLRVSRSIWRRYDEEKCHWQITKVALSPDLRHGKAYGILTWKGITEQTAKRIPSVLKPYWFIVGQAPDVPIDLGSGRGTATRGGLFKMPPPRPTVPFSKPTKASPSAEKK* # ORIGINAL: g6658.t1 original gene structure, not modified by PASA NODE_939_length_15721_cov_43.5013 AUGUSTUS gene 5312 10340 . - . ID=g6658;Name=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS mRNA 5312 10340 . - . ID=g6658.t1;Parent=g6658;Name=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 10214 10340 . - . ID=g6658.t1.exon1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 10214 10340 . - 0 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 9760 9854 . - . ID=g6658.t1.exon2;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 9760 9854 . - 2 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 9114 9297 . - . ID=g6658.t1.exon3;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 9114 9297 . - 0 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 8784 8950 . - . ID=g6658.t1.exon4;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 8784 8950 . - 2 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 8038 8377 . - . ID=g6658.t1.exon5;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 8038 8377 . - 0 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 7640 7736 . - . ID=g6658.t1.exon6;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 7640 7736 . - 2 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 7277 7484 . - . ID=g6658.t1.exon7;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 7277 7484 . - 1 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 6775 6875 . - . ID=g6658.t1.exon8;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 6775 6875 . - 0 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 6182 6312 . - . ID=g6658.t1.exon9;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 6182 6312 . - 1 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 5777 5844 . - . ID=g6658.t1.exon10;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 5777 5844 . - 2 ID=cds.g6658.t1;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS exon 5312 5551 . - . ID=g6658.t1.exon11;Parent=g6658.t1 NODE_939_length_15721_cov_43.5013 AUGUSTUS CDS 5312 5551 . - 0 ID=cds.g6658.t1;Parent=g6658.t1 #PROT g6658.t1 g6658 MVSSRRTSGRRSALFSTDGLVHLVVIIACLTALQLLQVDAITATIPAKCLAYTTIYGPSFVNTACIKYGCYYSWRFTHHNYIIGNADVNGNGQCTCNTGASGANCNVCASGQYGPNCKLCQSCNQGTCQDGFTGSGACTCNGNWVDVKFADGSTVSCSDCKAGYYGPTCTGVCPACAKGSSCNQGKNGDGKCTTSSSSPGVTSTSSGSSGSSSHMVAIGSAIGGCVALLAVIAIALVYRARVAKTVILHSRGSMVTKVANDSLDAIGHLDIESPPYGYAHAMTPLSAISGINAGAGSSDEAFVFDPMGTVTAVKSLKDGATYEENKLFIMEAKLMAELRHPNIVRIIGIVTHGKPPLLVLEFMSNGSLLSYLESKGENLSRKTLMCMCRDVAAGMVVLECRGFVHRDLAARNILVDSDGTCKIADFGLARQLSSDYYMSSLSQKIPIRWTPPEAIEFGKYSSASDVWAFGVVCWEVFSLGEMPYGQMTNNEARDIVKKGGRLAMPKMADARIYATMLSCWAVEPRDRPQFIKLFSDFQGMILGQSHLPSGAGEGFLKHDPTETYALYESLTPVISTECAAGSGRP* # PASA_UPDATE: g6659.t1, single gene model update, valid-1, status:[pasa:asmbl_10048,status:12], valid-1 NODE_939_length_15721_cov_43.5013 . gene 14087 15453 . - . ID=g6659;Name=g6659.t1 NODE_939_length_15721_cov_43.5013 . mRNA 14087 15453 . - . ID=g6659.t1;Parent=g6659;Name=g6659.t1 NODE_939_length_15721_cov_43.5013 . exon 15342 15453 . - . ID=g6659.t1.exon1;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . CDS 15342 15453 . - 0 ID=cds.g6659.t1;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . exon 14931 14998 . - . ID=g6659.t1.exon2;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . CDS 14931 14998 . - 2 ID=cds.g6659.t1;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . exon 14087 14682 . - . ID=g6659.t1.exon3;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . CDS 14473 14682 . - 0 ID=cds.g6659.t1;Parent=g6659.t1 NODE_939_length_15721_cov_43.5013 . three_prime_UTR 14087 14472 . - . ID=g6659.t1.utr3p1;Parent=g6659.t1 #PROT g6659.t1 g6659 MKWTAPEGIKFKKWTSASDVWAFGVVCWEVFSLGDKPYGQMTNNEAWDMVERGDRLAEPKMANARIYATMLLCWAVEPRDRPHFIKLFSEFQGMILGQSRASHLSSGAVEGYVELDPTEAYANYVNPIA* # PASA_UPDATE: g6657.t1, single gene model update, valid-1, status:[pasa:asmbl_10047,status:12], valid-1 NODE_939_length_15721_cov_43.5013 . gene 89 3963 . - . ID=g6657;Name=g6657.t1 NODE_939_length_15721_cov_43.5013 . mRNA 89 3963 . - . ID=g6657.t1;Parent=g6657;Name=g6657.t1 NODE_939_length_15721_cov_43.5013 . five_prime_UTR 3888 3963 . - . ID=g6657.t1.utr5p1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 3826 3963 . - . ID=g6657.t1.exon1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 3826 3887 . - 0 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 3514 3580 . - . ID=g6657.t1.exon2;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 3514 3580 . - 1 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 2813 2957 . - . ID=g6657.t1.exon3;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 2813 2957 . - 0 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 2424 2498 . - . ID=g6657.t1.exon4;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 2424 2498 . - 2 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 2132 2223 . - . ID=g6657.t1.exon5;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 2132 2223 . - 2 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 1707 1829 . - . ID=g6657.t1.exon6;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 1707 1829 . - 0 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 1001 1081 . - . ID=g6657.t1.exon7;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 1001 1081 . - 0 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 507 623 . - . ID=g6657.t1.exon8;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 507 623 . - 0 ID=cds.g6657.t1;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . exon 89 297 . - . ID=g6657.t1.exon9;Parent=g6657.t1 NODE_939_length_15721_cov_43.5013 . CDS 89 297 . - 0 ID=cds.g6657.t1;Parent=g6657.t1;3_prime_partial=true #PROT g6657.t1 g6657 MATDVDQSRLDNVIEALHNIGYEAKLLDDAELASAVTSWPVSQEYSHLCGLLCTELAAVAGIDSQFDGVTVVTENESAAFAIELTGFLKEYGCPVSAVYTAGIDSLGNQETRLDILDFLLGEVQAVRMLAVRHSEAHAVPAVQSVSLADASAIAAAEHLSNLAACLEIPLPNDVPIDGPAVIGQVRTKIAAILPTLPVDYIGRPLLTERLSPAQLAKLADVNTMMEAEYGTRRRVLLKRLDLTIQAFKWSEKAKKHEDELIRVYAPLRRRLSAAAPVSLYDVRAARDDLVRVVRISDDAVRQGTKSALLGSLLIGKVGAAIEL # ORIGINAL: g491.t1 original gene structure, not modified by PASA NODE_4058_length_2261_cov_32.4675 AUGUSTUS gene 72 1609 . + . ID=g491;Name=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS mRNA 72 1609 . + . ID=g491.t1;Parent=g491;Name=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS exon 72 107 . + . ID=g491.t1.exon1;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS CDS 72 107 . + 0 ID=cds.g491.t1;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS exon 292 379 . + . ID=g491.t1.exon2;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS CDS 292 379 . + 0 ID=cds.g491.t1;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS exon 677 816 . + . ID=g491.t1.exon3;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS CDS 677 816 . + 2 ID=cds.g491.t1;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS exon 1066 1176 . + . ID=g491.t1.exon4;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS CDS 1066 1176 . + 0 ID=cds.g491.t1;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS exon 1481 1609 . + . ID=g491.t1.exon5;Parent=g491.t1 NODE_4058_length_2261_cov_32.4675 AUGUSTUS CDS 1481 1609 . + 0 ID=cds.g491.t1;Parent=g491.t1 #PROT g491.t1 g491 KPETCVRFFDRVDYHTAHGDDALFLARDFFRTMAVVKYIGAGEGRVPYVVVSGMMFETTLRELLLVRQYRVEVYAREGKGNSWSLSMRGSPGNLQQFEEVLFSNAEMASSAVVMAVKVSTEGGNLTVGVAFADASLHRFGVCEFADNDQFSNFEVRRCLRRVSLMWC* # PASA_UPDATE: g8686.t1, single gene model update, valid-1, status:[pasa:asmbl_5606,status:3], valid-1 NODE_3130_length_4243_cov_38.8419 . gene 73 3310 . + . ID=g8686;Name=g8686.t1 NODE_3130_length_4243_cov_38.8419 . mRNA 73 3310 . + . ID=g8686.t1;Parent=g8686;Name=g8686.t1 NODE_3130_length_4243_cov_38.8419 . five_prime_UTR 73 112 . + . ID=g8686.t1.utr5p1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . exon 73 145 . + . ID=g8686.t1.exon1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . CDS 113 145 . + 0 ID=cds.g8686.t1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . exon 377 2202 . + . ID=g8686.t1.exon2;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . CDS 377 2202 . + 0 ID=cds.g8686.t1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . exon 2418 2506 . + . ID=g8686.t1.exon3;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . CDS 2418 2506 . + 1 ID=cds.g8686.t1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . exon 2709 3310 . + . ID=g8686.t1.exon4;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . CDS 2709 3013 . + 2 ID=cds.g8686.t1;Parent=g8686.t1 NODE_3130_length_4243_cov_38.8419 . three_prime_UTR 3014 3310 . + . ID=g8686.t1.utr3p1;Parent=g8686.t1 #PROT g8686.t1 g8686 MYRANTGNDRMITVPNYNSMFSELRHHPPASVHIIGSDPVPSTVNRSYRGPIDGSSQTVPQFRTTVHATAGARGDVGGTHRFMYFRRPIVPYMTALPPEVLLQATEAVDPLAPPQQRPPTPPTRTVGVQTMYRESEAQTDPYTPEYTVRPGAQPELLTLATLSYGRGLPATLAEVEMIERARAKRAWEATLPGLSEPGGFELRRKMMEEMELQEWKEREAEIQRIQEARLEVLKQVLAKRNAEMDEAQESRLNTMWHRRERENDHKNERLRSEAAKTIRKLMKARANPEGAVERRDVVREYADPSSGVYAPLTREGVFPDRTGHQFVVRSVHLDTYEGLCALERSLPASVFEPVIKVPFRTRKPRGPAERREAHVQNKLREMEETIRERKEEKTRAPKPLKFCTRIEKPAPRPPTPTVEVASKADDAMDRAVIFLQQLLRGRAMQNRMFDGKERRLELIRELRSTHAIESACEGDVDAQRQTTVQRQQERAERRHAEAIARSALEAGQGAAVADTLDFLSKELVRLQEERRIAAMVRLAERERRMREAEESGRRAMEEERRAREDEVFRTIVNVHKDTVDTYLEDVVGNAVEGTAERQAREFVRERARQLNDIVDEMEKRKNYAPESVVANLVSSFLLPEVERQTLREKLRDDQLRFMLAARRTIDESMGPIERQLAESSAEPAEKASTDVAEGHVAENGASADAEGGSHTGAAAPAPSAPTSVARARANRNKSHDAGSGGGGILETEED* # ORIGINAL: g3922.t1 original gene structure, not modified by PASA NODE_4339_length_1793_cov_566.809 AUGUSTUS gene 1 1793 . - . ID=g3922;Name=g3922.t1 NODE_4339_length_1793_cov_566.809 AUGUSTUS mRNA 1 1793 . - . ID=g3922.t1;Parent=g3922;Name=g3922.t1 NODE_4339_length_1793_cov_566.809 AUGUSTUS exon 1 1793 . - . ID=g3922.t1.exon1;Parent=g3922.t1 NODE_4339_length_1793_cov_566.809 AUGUSTUS CDS 1 1793 . - 2 ID=cds.g3922.t1;Parent=g3922.t1 #PROT g3922.t1 g3922 LGGATRLTFSVSDYATVQTVTVTADAVGATSVGGAQVSGRSVLTVASCDVEVVVIPSIQVVSVVRGDLVPGRSTEVVLQISSEVLAGGAIVATSGNSGVASVVSAAGALTFTRGDYSALRTVTVIGAGAGSVSIGLSSAAGGNPLVDGSASVRVLVAPSVIVTPTSASAYTNKRVSVSVRLSSDPTESVTVVPSVSGDAGAIAQILCGDAQATSLTFTRSDYGFSKSCIIQTGRISGGGVIALSYFTGYPGGAAGTVQLDVAAVPGVNIRLERNALNPSESTVMYVRMSSRLIGDAVVSVSSASSSVVGVSVGSLSFGSGDWSVEQKVTVTAGILAGTSVVSCRIMSLSLGNMTDTSPQNVTVEVVQRPVVLIGSGGVRLHPGQSTTVGVRLSSVPIDTTTVDVSIGDTGLATLGGSTRLTFTVGNFATAQTVTVSAGVVGTTSIGAVKVSGLSALSFSPCSLEVVSVPHIQIVSVGRPDLVPGRTTEVVFRLSSIPLSSGAIVCLMSSSDVAGVTSVAGALSFSTGDYATLRTVTVSASAAGTANVVLSGAAGGNPVVSTSTAVQVFVAPDVVVSVEAGTMYANQAVTVSVHLSGD # PASA_UPDATE: g7518.t1, single gene model update, valid-1, status:[pasa:asmbl_6165,status:3], valid-1 NODE_3510_length_3302_cov_46.0022 . gene 2267 3300 . + . ID=g7518;Name=g7518.t1 NODE_3510_length_3302_cov_46.0022 . mRNA 2267 3300 . + . ID=g7518.t1;Parent=g7518;Name=g7518.t1 NODE_3510_length_3302_cov_46.0022 . five_prime_UTR 2267 2404 . + . ID=g7518.t1.utr5p1;Parent=g7518.t1 NODE_3510_length_3302_cov_46.0022 . exon 2267 3300 . + . ID=g7518.t1.exon1;Parent=g7518.t1 NODE_3510_length_3302_cov_46.0022 . CDS 2405 2833 . + 0 ID=cds.g7518.t1;Parent=g7518.t1 NODE_3510_length_3302_cov_46.0022 . three_prime_UTR 2834 3300 . + . ID=g7518.t1.utr3p1;Parent=g7518.t1 #PROT g7518.t1 g7518 MRHTSPSTPVGTMNLLLASALFAAIVVLGLCASDARAESALDVQTTTTPGVINSAGDLESLKSVAQAREAEFQRRRDAAKREMKRRQRAMAELTNDYVSREKGVLHTDMYDAEVRALGDQKKAYDALTEQQTRCRQSGRCMP* # ORIGINAL: g7517.t1 original gene structure, not modified by PASA NODE_3510_length_3302_cov_46.0022 AUGUSTUS gene 186 1666 . + . ID=g7517;Name=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS mRNA 186 1666 . + . ID=g7517.t1;Parent=g7517;Name=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS exon 186 522 . + . ID=g7517.t1.exon1;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS CDS 186 522 . + 0 ID=cds.g7517.t1;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS exon 749 1075 . + . ID=g7517.t1.exon2;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS CDS 749 1075 . + 2 ID=cds.g7517.t1;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS exon 1307 1389 . + . ID=g7517.t1.exon3;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS CDS 1307 1389 . + 2 ID=cds.g7517.t1;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS exon 1616 1666 . + . ID=g7517.t1.exon4;Parent=g7517.t1 NODE_3510_length_3302_cov_46.0022 AUGUSTUS CDS 1616 1666 . + 0 ID=cds.g7517.t1;Parent=g7517.t1 #PROT g7517.t1 g7517 MRSAACEYYSTAHHHPQLPCSLLSSRLPGDRNPKFQVDGHSRKYTLHAESNATHWSVNLIRSKDGFRIPYERLDALTLIAILRLGLVAGLRNRLYDLFLGLPMYEDMAPWNIVLRRGRLDYIDYDTRDRTFDKIVPLAYQVIAILMNYERTVKDFGRCKGKAGTEYGFSYISSCVESGFKGPCSNSAFPVPCGDGECKATYVDCLRSVAEIEARRRTDAVEGHDEDNVRQLEADLEQQATGKRIVGDEWTFNKDGPVTGEKKTFV* # PASA_UPDATE: g11448.t1, single gene model update, valid-1, status:[pasa:asmbl_6786,status:12], valid-1 NODE_3975_length_2422_cov_36.8189 . gene 222 2305 . - . ID=g11448;Name=g11448.t1 NODE_3975_length_2422_cov_36.8189 . mRNA 222 2305 . - . ID=g11448.t1;Parent=g11448;Name=g11448.t1 NODE_3975_length_2422_cov_36.8189 . exon 2206 2305 . - . ID=g11448.t1.exon1;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . CDS 2206 2305 . - 0 ID=cds.g11448.t1;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . exon 1945 2054 . - . ID=g11448.t1.exon2;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . CDS 1945 2054 . - 2 ID=cds.g11448.t1;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . exon 1294 1559 . - . ID=g11448.t1.exon3;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . CDS 1294 1559 . - 0 ID=cds.g11448.t1;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . exon 222 977 . - . ID=g11448.t1.exon4;Parent=g11448.t1 NODE_3975_length_2422_cov_36.8189 . CDS 222 977 . - 1 ID=cds.g11448.t1;Parent=g11448.t1;3_prime_partial=true #PROT g11448.t1 g11448 MTTPFEDRTLQILNCKYTVPTTPAYSPALLSLIKFMLEIDPVQRPDIFTVANRAALLRHGNAQHSLTPPPAYLEVIAREGNSNSGSRTEAGGSPLPQSSPHSQQSQQQQQQLYQQQQQQQQQQHTTGSTLGVANTHGQTPRSPMVSRVASPLPDRSQPAAGATSRRERPKGSLPSAVPAQHQSGAFFDVATPASPGVGNPWADARDSFPTSAQTPSSSGVPSASSPTSHTHQPMSTAAAKAALFGSSEIAANPFDDMPSFGSTPSNLRVSANDLSGGPQQQQQQQQQQQQQQHQQQQTQRPPSVHMEVPSHSPTPRSTHSSRENVSHAHPNTNAHSHAGPPPPEDLESAICEITLVDPFADMPTFTSTTAGAPSASGGNLTAQQQIDAFGAQFASPKPLRKIQHTRSHSD # PASA_UPDATE: g11356.t1, single gene model update, valid-1, status:[pasa:asmbl_1716,status:12], valid-1 # PASA_UPDATE: g11356.t1.1.5b6bee86, alt-splice addition, valid-1, status:[pasa:asmbl_1715,status:25], valid-1 NODE_1479_length_11041_cov_39.6222 . gene 13 1483 . - . ID=g11356;Name=g11356.t1 NODE_1479_length_11041_cov_39.6222 . mRNA 13 1471 . - . ID=g11356.t1;Parent=g11356;Name=g11356.t1 NODE_1479_length_11041_cov_39.6222 . five_prime_UTR 1304 1471 . - . ID=g11356.t1.utr5p1;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . exon 978 1471 . - . ID=g11356.t1.exon1;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . CDS 978 1303 . - 0 ID=cds.g11356.t1;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . exon 575 863 . - . ID=g11356.t1.exon2;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . CDS 575 863 . - 1 ID=cds.g11356.t1;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . exon 13 308 . - . ID=g11356.t1.exon3;Parent=g11356.t1 NODE_1479_length_11041_cov_39.6222 . CDS 13 308 . - 0 ID=cds.g11356.t1;Parent=g11356.t1;3_prime_partial=true NODE_1479_length_11041_cov_39.6222 . mRNA 382 1483 . - . ID=g11356.t1.1.5b6bee86;Parent=g11356;Name=g11356.t1 NODE_1479_length_11041_cov_39.6222 . five_prime_UTR 1304 1483 . - . ID=g11356.t1.1.5b6bee86.utr5p1;Parent=g11356.t1.1.5b6bee86 NODE_1479_length_11041_cov_39.6222 . exon 978 1483 . - . ID=g11356.t1.1.5b6bee86.exon1;Parent=g11356.t1.1.5b6bee86 NODE_1479_length_11041_cov_39.6222 . CDS 978 1303 . - 0 ID=cds.g11356.t1.1.5b6bee86;Parent=g11356.t1.1.5b6bee86 NODE_1479_length_11041_cov_39.6222 . exon 382 863 . - . ID=g11356.t1.1.5b6bee86.exon2;Parent=g11356.t1.1.5b6bee86 NODE_1479_length_11041_cov_39.6222 . CDS 382 863 . - 1 ID=cds.g11356.t1.1.5b6bee86;Parent=g11356.t1.1.5b6bee86;3_prime_partial=true #PROT g11356.t1 g11356 MMAGMRRALSGALLMASPRLRLMTCTHRCAYAPLMTSARAMSADVSATASAPQAPAPDTHPLHRRVPLIAGSIHEFADKIYDLMETEPVVLNKKIKSPFGWRETYKSFCERILLRSETYFYLGEMHRRCGDLLTSALAAAAKPVAASFYTAQPSARTSLRRPIAIVGISPDERARLVSLLERTTVVEAYEQNVTTPTGYDITTTKVFLEMAADPVRNIPESYIVLDDCHVVPFEPERPLKGHSADSLEVVARKVTGSTLDLSGLSVSVAGGDSPTIQVGAHDLVTALARIDPEVNPHALVQFV #PROT g11356.t1.1.5b6bee86 g11356 MMAGMRRALSGALLMASPRLRLMTCTHRCAYAPLMTSARAMSADVSATASAPQAPAPDTHPLHRRVPLIAGSIHEFADKIYDLMETEPVVLNKKIKSPFGWRETYKSFCERILLRSETYFYLGEMHRRCGDLLTSALAAAAKPVAASFYTAQPSARTSLRRPIAIVGISPDERARLVSLLERTTVVEAYEQNVTTPTGYDITTTKVGVCGAAVCASTCEESAYRRVASLHLRARLHRALGLMVDVVCPMPLSSCVLLVYGVALESLTGL # PASA_UPDATE: g11359.t1, single gene model update, valid-1, status:[pasa:asmbl_1714,status:3], valid-1 NODE_1479_length_11041_cov_39.6222 . gene 6432 8741 . + . ID=g11359;Name=g11359.t1 NODE_1479_length_11041_cov_39.6222 . mRNA 6432 8741 . + . ID=g11359.t1;Parent=g11359;Name=g11359.t1 NODE_1479_length_11041_cov_39.6222 . five_prime_UTR 6432 6552 . + . ID=g11359.t1.utr5p1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 6432 6645 . + . ID=g11359.t1.exon1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 6553 6645 . + 0 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 6763 6855 . + . ID=g11359.t1.exon2;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 6763 6855 . + 0 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 7011 7086 . + . ID=g11359.t1.exon3;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 7011 7086 . + 0 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 7223 7638 . + . ID=g11359.t1.exon4;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 7223 7638 . + 2 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 7796 7934 . + . ID=g11359.t1.exon5;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 7796 7934 . + 0 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 8083 8119 . + . ID=g11359.t1.exon6;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 8083 8119 . + 2 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 8271 8400 . + . ID=g11359.t1.exon7;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 8271 8400 . + 1 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . exon 8594 8741 . + . ID=g11359.t1.exon8;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . CDS 8594 8716 . + 0 ID=cds.g11359.t1;Parent=g11359.t1 NODE_1479_length_11041_cov_39.6222 . three_prime_UTR 8717 8741 . + . ID=g11359.t1.utr3p1;Parent=g11359.t1 #PROT g11359.t1 g11359 MADSDGPPARPKAKAGAARLPVPRSLPVPVESVGTWWQCVGVLRGSAVVITDAASAAKLYAQGCFGKGTLSRSKPIHATREEERHKSVRLDRLARRKDKVRNRADTPSRARGQHSQPNAGVNYSLQALDNPTCATASLSADRDAWRCDDDSGKSHLGESGVGQIAAGLPGTLFAAPGESLLPVPVHGRLPVRQPHEMLQLFPEEAFFLAHSLNCLRVHLPTDGPERVFLTSDELWGAFLATRASFPHSYAAYHHYRTKGWVPRSGLKFGLDYVLYDKGPEYCHSSYGVIVRPAVAGTLDNAATGDPSLVHLTWQSLGNANRVGEQISKDVLVTYVVAPPNTAVSTPECLSHMTVCEVVFRRWMPQRTR* # ORIGINAL: g11357.t1 original gene structure, not modified by PASA NODE_1479_length_11041_cov_39.6222 AUGUSTUS gene 1588 4087 . - . ID=g11357;Name=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS mRNA 1588 4087 . - . ID=g11357.t1;Parent=g11357;Name=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 3973 4087 . - . ID=g11357.t1.exon1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 3973 4087 . - 0 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 3792 3820 . - . ID=g11357.t1.exon2;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 3792 3820 . - 2 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 3558 3660 . - . ID=g11357.t1.exon3;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 3558 3660 . - 0 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 2981 3157 . - . ID=g11357.t1.exon4;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 2981 3157 . - 2 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 2653 2828 . - . ID=g11357.t1.exon5;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 2653 2828 . - 2 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 2228 2268 . - . ID=g11357.t1.exon6;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 2228 2268 . - 0 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 1903 2027 . - . ID=g11357.t1.exon7;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 1903 2027 . - 1 ID=cds.g11357.t1;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS exon 1588 1754 . - . ID=g11357.t1.exon8;Parent=g11357.t1 NODE_1479_length_11041_cov_39.6222 AUGUSTUS CDS 1588 1754 . - 2 ID=cds.g11357.t1;Parent=g11357.t1 #PROT g11357.t1 g11357 MTPSIDTAVLKTLEDNARTAEAAVESLTAQLDNLLMHSQTAGSSSADESDEARALRAENDQLKSDIAQLKAQLEEAELRNAGGKPAVSAPTTSKAAAAKPAHKKEKAAADAPKKENSATETPKKDIKEAKPKKEAAAPKEEANEPEPDVSHLDFRVGKIVKAERHPDADSLYVEEVDLGEAKPRTVVSGLVKHVPIEQMQNRLAILLCNLKPAKMRGVESQAMVMCANNAEGKVEILDPPAGSAPGDRIVFDGFDGQPDAQLNPKKKIFEAIQPHLVTDANRVATYKGAAFTVRGKGVCTAPTIAQGGIK* # PASA_UPDATE: g11358.t1, single gene model update, valid-1, status:[pasa:asmbl_1713,status:12], valid-1 NODE_1479_length_11041_cov_39.6222 . gene 4566 5552 . + . ID=g11358;Name=g11358.t1 NODE_1479_length_11041_cov_39.6222 . mRNA 4566 5552 . + . ID=g11358.t1;Parent=g11358;Name=g11358.t1 NODE_1479_length_11041_cov_39.6222 . five_prime_UTR 4566 4625 . + . ID=g11358.t1.utr5p1;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . exon 4566 4715 . + . ID=g11358.t1.exon1;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . CDS 4626 4715 . + 0 ID=cds.g11358.t1;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . exon 4936 5073 . + . ID=g11358.t1.exon2;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . CDS 4936 5073 . + 0 ID=cds.g11358.t1;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . exon 5325 5552 . + . ID=g11358.t1.exon3;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . CDS 5325 5459 . + 0 ID=cds.g11358.t1;Parent=g11358.t1 NODE_1479_length_11041_cov_39.6222 . three_prime_UTR 5460 5552 . + . ID=g11358.t1.utr3p1;Parent=g11358.t1 #PROT g11358.t1 g11358 MSLIRSQLSSSSTEDARRRVLSLYRSWIREAPHTVEHYALDLTVGEVRRKIREQFLKHAEIKDVRVIDLLVFKGKQELEETHKIWKQKTHVLRYFNDESGIVVVPAYKKDFLTRFYDGHQ* # PASA_UPDATE: g11360.t1, single gene model update, valid-1, status:[pasa:asmbl_1717,status:12], valid-1 NODE_1479_length_11041_cov_39.6222 . gene 8870 10828 . - . ID=g11360;Name=g11360.t1 NODE_1479_length_11041_cov_39.6222 . mRNA 8870 10828 . - . ID=g11360.t1;Parent=g11360;Name=g11360.t1 NODE_1479_length_11041_cov_39.6222 . five_prime_UTR 10789 10828 . - . ID=g11360.t1.utr5p1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 10719 10828 . - . ID=g11360.t1.exon1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 10719 10788 . - 0 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 10433 10545 . - . ID=g11360.t1.exon2;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 10433 10545 . - 2 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 10178 10321 . - . ID=g11360.t1.exon3;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 10178 10321 . - 0 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 9802 9879 . - . ID=g11360.t1.exon4;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 9802 9879 . - 0 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 9369 9497 . - . ID=g11360.t1.exon5;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 9369 9497 . - 0 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . exon 8870 9189 . - . ID=g11360.t1.exon6;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . CDS 9085 9189 . - 0 ID=cds.g11360.t1;Parent=g11360.t1 NODE_1479_length_11041_cov_39.6222 . three_prime_UTR 8870 9084 . - . ID=g11360.t1.utr3p1;Parent=g11360.t1 #PROT g11360.t1 g11360 MPQPNTSWKSFLLAGDRFVVGDRILVRPDGKGLDYIAAVQCIRTDANEEILIDLLWYYRPEETVFGRQAYHGDDEVLESDHKDTIHVSSVNSKCFVRTLAEYNAEHAELANNGTPPEFPTFYSRSKYLYKKKKIEPKSLPLICLCQQPENPDTPMVCCDQCDQWYHDSCVGMTKEKLKKLDKYVCPKCDQRPPLTDADVKPVAEKPSRKRKR* # ORIGINAL: g8327.t1 original gene structure, not modified by PASA NODE_53_length_49015_cov_52.4253 AUGUSTUS gene 32600 36202 . + . ID=g8327;Name=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS mRNA 32600 36202 . + . ID=g8327.t1;Parent=g8327;Name=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 32600 33024 . + . ID=g8327.t1.exon1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 32600 33024 . + 0 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 33139 33424 . + . ID=g8327.t1.exon2;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 33139 33424 . + 1 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 33608 33856 . + . ID=g8327.t1.exon3;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 33608 33856 . + 0 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 34088 34213 . + . ID=g8327.t1.exon4;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 34088 34213 . + 0 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 34367 34913 . + . ID=g8327.t1.exon5;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 34367 34913 . + 0 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 35064 35240 . + . ID=g8327.t1.exon6;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 35064 35240 . + 2 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 35387 35490 . + . ID=g8327.t1.exon7;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 35387 35490 . + 2 ID=cds.g8327.t1;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 35678 36202 . + . ID=g8327.t1.exon8;Parent=g8327.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 35678 36202 . + 0 ID=cds.g8327.t1;Parent=g8327.t1 #PROT g8327.t1 g8327 MARIHPLPPNIELKITGEDPILRQETEEWRRLEDVVKSQMPVGSRSPEDDNLFRIVRGLCKAASSLDERKHQHVSMHELISCLTNGGVYGVDSDIVMTRANAREPGTGKSLLHVAAHGGVVPLVALLLDCGAAIDARDASGRTPMHYAVARSFNHTVKILLQRGASYTTLTNEGQTVIHFAARYDADKILGVILAFVTMQEPSSNTNLANVGLHKQPQSADDLSSAALKLLHQKDAKGRSPLHVAAMYDRSVAARYLLELGADASEHDSLKVTPLETMIDKMPGVAKLALASEAFVIINRTGRKMTLDLAALEPPPPATQDEARHTSSPLEQMVLQNRLELIDMPAVQRLIYYKWIHFGRHKMLQEVAFYFVYLALWTTVALSAPESERHIYSNGREWRAVVEVCAMLMWAYNIFIELMEIYRSYHQHKIWVRRRISELSEEQAGCDADWPDHEYLSEEIQAVRAKGVFGNYVSNAWNYFDWMSYLTIFASFIANVDNITEQNTESARQNVRWMTVALIFMWAKVLKLARAFETFGPFVVMLGKIVWNVVEFVFLYVTFLIPFVVGFYLVVGDSAPGDFGEIQIALMSVYRMTFVDYDYDEIYAADQIMGPILVASWLFLSGVLMVNLFVAIMSNTFQIVYDNAKSVAAMQHADAVLSVQYVIPLDKLQAHRRHIHAECNPDVVLFDEDDGGSENPRDQLRNLREEIYGVVVSQTETITQMSRQLDELKTLMQMMQSGGTLQQPQFGSRTGSVVNVSDYTYGQSSYLHGPGSAIALPTGADDPSSNPSVPTMLAASGRGSQLPPLTKDRPTE* # PASA_UPDATE: g8323.t1, single gene model update, valid-1, status:[pasa:asmbl_8048,status:3], valid-1 NODE_53_length_49015_cov_52.4253 . gene 20432 22064 . + . ID=g8323;Name=g8323.t1 NODE_53_length_49015_cov_52.4253 . mRNA 20432 22064 . + . ID=g8323.t1;Parent=g8323;Name=g8323.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 20432 20490 . + . ID=g8323.t1.utr5p1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . exon 20432 20545 . + . ID=g8323.t1.exon1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . CDS 20491 20545 . + 0 ID=cds.g8323.t1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . exon 20668 20840 . + . ID=g8323.t1.exon2;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . CDS 20668 20840 . + 2 ID=cds.g8323.t1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . exon 20963 21081 . + . ID=g8323.t1.exon3;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . CDS 20963 21081 . + 0 ID=cds.g8323.t1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . exon 21219 21555 . + . ID=g8323.t1.exon4;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . CDS 21219 21555 . + 1 ID=cds.g8323.t1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . exon 21758 22064 . + . ID=g8323.t1.exon5;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . CDS 21758 22042 . + 0 ID=cds.g8323.t1;Parent=g8323.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 22043 22064 . + . ID=g8323.t1.utr3p1;Parent=g8323.t1 #PROT g8323.t1 g8323 MMGTRLLDRHFIDAVGAAAVAAEAIPAFRVLQFNCLADHLSNAFPLVDAKWLSWEHRSELIVGEIIRVDADFVCLEEVDHFADVLEPALASRGYTGFFKQKPGGVDGCALFYRQSAAEMLCVEEVEYADIAAMPGASQVAVVGSFRLVPSLRHVCVAVTHLKAKDEFEGVRLQQAAALMRHLHTAYAWSPCGVPIKGLAGSLQKDLTFVVAGDLNTEATGLVYARMREGLSSDDDRGSIPLYSAYTCYRQDAPGTEPVYTTWKTRPPKEVQRTIDYIFHTAHVAPRRLLSIPLPDAIPAERLPCERYPSDHFAIACDFAFCS* # PASA_UPDATE: g8319.t1, single gene model update, valid-1, status:[pasa:asmbl_8046,status:12], valid-1 NODE_53_length_49015_cov_52.4253 . gene 3401 4977 . + . ID=g8319;Name=g8319.t1 NODE_53_length_49015_cov_52.4253 . mRNA 3401 4977 . + . ID=g8319.t1;Parent=g8319;Name=g8319.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 3401 3437 . + . ID=g8319.t1.utr5p1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 3697 3698 . + . ID=g8319.t1.utr5p2;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 3401 3437 . + . ID=g8319.t1.exon1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 3697 3795 . + . ID=g8319.t1.exon2;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . CDS 3699 3795 . + 0 ID=cds.g8319.t1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 3945 3981 . + . ID=g8319.t1.exon3;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . CDS 3945 3981 . + 2 ID=cds.g8319.t1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 4115 4354 . + . ID=g8319.t1.exon4;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . CDS 4115 4354 . + 1 ID=cds.g8319.t1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 4473 4603 . + . ID=g8319.t1.exon5;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . CDS 4473 4603 . + 1 ID=cds.g8319.t1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . exon 4719 4977 . + . ID=g8319.t1.exon6;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . CDS 4719 4801 . + 2 ID=cds.g8319.t1;Parent=g8319.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 4802 4977 . + . ID=g8319.t1.utr3p1;Parent=g8319.t1 #PROT g8319.t1 g8319 MSKAQIQKPAPYFQGTAVVNGEFKEIKLTDYKGKYVVFFFYPLDFTFVCPTEIIAYSDRAAEFRALNTEVIAASVDSHFTHLAWVNTPRKDGGLGKMDIPILSDLTKQISRDYGVLLEDAGIALRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFKFTDEHGEVCPAGWKPGQATIKPDTKGSKEYFNQH* # PASA_UPDATE: g8329.t1, single gene model update, valid-1, status:[pasa:asmbl_8052,status:12],[pasa:asmbl_8056,status:12], valid-1 NODE_53_length_49015_cov_52.4253 . gene 39647 46623 . - . ID=g8329;Name=g8329.t1 NODE_53_length_49015_cov_52.4253 . mRNA 39647 46623 . - . ID=g8329.t1;Parent=g8329;Name=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 46598 46623 . - . ID=g8329.t1.exon1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 46598 46623 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 46178 46345 . - . ID=g8329.t1.exon2;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 46178 46345 . - 1 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 45893 46004 . - . ID=g8329.t1.exon3;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 45893 46004 . - 1 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 44699 44838 . - . ID=g8329.t1.exon4;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 44699 44838 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 44281 44464 . - . ID=g8329.t1.exon5;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 44281 44464 . - 1 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 43427 43979 . - . ID=g8329.t1.exon6;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 43427 43979 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 42698 43212 . - . ID=g8329.t1.exon7;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 42698 43212 . - 2 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 42277 42538 . - . ID=g8329.t1.exon8;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 42277 42538 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 41636 42036 . - . ID=g8329.t1.exon9;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 41636 42036 . - 2 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 41265 41410 . - . ID=g8329.t1.exon10;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 41265 41410 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 40777 41068 . - . ID=g8329.t1.exon11;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 40777 41068 . - 1 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 40547 40644 . - . ID=g8329.t1.exon12;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 40547 40644 . - 0 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 40185 40321 . - . ID=g8329.t1.exon13;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 40185 40321 . - 1 ID=cds.g8329.t1;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . exon 39647 39912 . - . ID=g8329.t1.exon14;Parent=g8329.t1 NODE_53_length_49015_cov_52.4253 . CDS 39647 39912 . - 2 ID=cds.g8329.t1;Parent=g8329.t1 #PROT g8329.t1 g8329 MTDMTAKFRVNYEDLTLDRVLGRGSYGVVYKAQYRGSTVAVKRLHTTANDDRQIDAFRKEATILCGLRHPNVVLFMGLVDNFPNLAIVFEYMPLGTLFSVLRVADFGLTRLKHRDTVPCTDGEARKDAQRESMDLNAEGFMGRLGSIHWLAPEIIAGDRFVEAADVYSYGIVTWEVATGEELYVGVHPMAVGFRVLNEDMRPSVEDITNEPLKALMTSCWAKEVADRPSFPSIVERLRLLPRTSLTVQLPPPHSLRLPSPSASPGSNRGGGGQSPVLTPRGEAGAMASGASYASGAQQQQQQQLWQQQQFGAGGLLAVGPAVPLPLSRASIVRQPAHPPIPPVAIAHCDVAFGNLLWDVAPHAMRKAIPLMTAEMRRLMDEHEGYEVRSDMDKMVIAFKSASNAVLWACACQVSLAALDWPDELLALPLCAPVLQDAVDGFLECVSSIEREAAEDHVLPRALDPAQLVADCRGGCDSASVVFRGLPLRLGIDYGECERSLVGDEDAGVAGAGTSGGLAGSASTAAKKQGKELKVASFDFMPPSRASYRGHIIKTAAAFRKCAGPGQILMTVPAMCEATATMPAFAKSTVRLAEIGEIAVSVPGHHSARDGSIQSTTTQNAHHGSLRRRYTGGGMTVSAVAVWEASGRAVSSGMVQAVPQSLALRRFPSLPKVRHDGSSLSPTTHRHAPPSSGAVAAVPAVGAGASVSAVNLGDIGTDIDAVADLNSAVKMGARKGVSDDGADGASDNVENEAMILRVPGGARLRGKRMSLSSLTFWKIDGAGVDVLEEISGTTMYSGAVHMGRWNGIRVTIRKLPAQVLRHEAKWLDVRADLAVRIQLRHPNILELLGVAIDVLEPLMVFEYASRGSLRTLLRAAGAKQPKGTIPPAPDMAYKHDFTFERRLVMVTDIAKALAYLHGRRPAIVHANIHTGGMWLTEAWRIKIGDFGLSLAATDGGSGYWTAPEYLNGSVNDLGTPSDVYGLGIAAYEIFMMAIPYGERNADWISLVGMVTEGLRPRIPRSVSVDYIEFLESCWAHNPRHRMSASDAVSRLEVLAEAYLALLAASRPASAVARPTASPAAVVVELHGDDGQFSQPRVSTV* # PASA_UPDATE: g8322.t1, single gene model update, valid-1, status:[pasa:asmbl_8050,status:3], valid-1 NODE_53_length_49015_cov_52.4253 . gene 16679 20174 . - . ID=g8322;Name=g8322.t1 NODE_53_length_49015_cov_52.4253 . mRNA 16679 20174 . - . ID=g8322.t1;Parent=g8322;Name=g8322.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 20082 20174 . - . ID=g8322.t1.utr5p1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . exon 19739 20174 . - . ID=g8322.t1.exon1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . CDS 19739 20081 . - 0 ID=cds.g8322.t1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . exon 19441 19607 . - . ID=g8322.t1.exon2;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . CDS 19441 19607 . - 2 ID=cds.g8322.t1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . exon 18641 19282 . - . ID=g8322.t1.exon3;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . CDS 18641 19282 . - 0 ID=cds.g8322.t1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . exon 17377 18438 . - . ID=g8322.t1.exon4;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . CDS 17377 18438 . - 0 ID=cds.g8322.t1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . exon 16679 16939 . - . ID=g8322.t1.exon5;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . CDS 16724 16939 . - 0 ID=cds.g8322.t1;Parent=g8322.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 16679 16723 . - . ID=g8322.t1.utr3p1;Parent=g8322.t1 #PROT g8322.t1 g8322 MARRTSLCAFRDGCASRAPHDIRCSPELLRGFAGDAHAQASAQSSASVPATGGCRLACAVDVHGTPALCWLVPDDGVEERDAILQPWLWDALARGQSASVLTVEVEHIPQHRISVCRNIALVRISGSLPVGVARTRRQDDDAGSAGKCQSLQPSGIDYAGAAVRRLAGVLVSESALVCLRWFGGAEVVFRVQSVTASADAHADTSADIDATPGHTRQRAVLRLAPSTGCEMYSATPPVPARVTSAARAAIAAIGDDVPSRGSRRPADALTLYVASALSSPSSDLRRRGGVLVVGPSGAGKTHLVGAVCAAFPVPLFRLSCVTLAARHASETATSASAVEDVRGLFAQCVGLSPCVVVLDDADAIGRGSSLWDCVGRSLDTLPLGACTVILAQSQEALPSSLFRPGRIDHVVSLRPPSSTERTAALVHVMREELALAASHSHANVFPHADHEADFDVAEIARRLTQSTAGFLPRDLVRLCRVAGLHLQSLLMSRMASPPSLRDDGDREESAAGFTEDDVSRAFDAALASVRPAQLQRYAPGDIGTATAVTWDDVGGYNDIKARLERVVMWPLLHGDALRRLGLPPSSGVLLHGPSGCGKTLLARGLSERARRSANPVWVRAPELFSKYLGESEAAVRDLFARVRESVPCIVVIDEIDAIAGSRDSLTDDGGGGDAATGGVGGRVLSQLLNEMEGVVSNTGAEGSVVVVGCTSMPLSAIDAAVLRPGRLENIIEVGLPTRDDRADIVRVLSRKIPLSASPECAPEAIADRTPGWTGAAITAALRRAALGALRRDMNAVAIEAADMQHALAP* # PASA_UPDATE: g8321.t1, single gene model update, valid-1, status:[pasa:asmbl_8047,status:3], valid-1 NODE_53_length_49015_cov_52.4253 . gene 10236 16547 . + . ID=g8321;Name=g8321.t1 NODE_53_length_49015_cov_52.4253 . mRNA 10236 16547 . + . ID=g8321.t1;Parent=g8321;Name=g8321.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 10236 10472 . + . ID=g8321.t1.utr5p1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 10236 10578 . + . ID=g8321.t1.exon1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 10473 10578 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 10704 10832 . + . ID=g8321.t1.exon2;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 10704 10832 . + 2 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 10948 11009 . + . ID=g8321.t1.exon3;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 10948 11009 . + 2 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 11144 11216 . + . ID=g8321.t1.exon4;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 11144 11216 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 11325 11603 . + . ID=g8321.t1.exon5;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 11325 11603 . + 2 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 11834 11994 . + . ID=g8321.t1.exon6;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 11834 11994 . + 2 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 12298 12813 . + . ID=g8321.t1.exon7;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 12298 12813 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 13029 13111 . + . ID=g8321.t1.exon8;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 13029 13111 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 13295 13514 . + . ID=g8321.t1.exon9;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 13295 13514 . + 1 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 13987 14118 . + . ID=g8321.t1.exon10;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 13987 14118 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 14318 14417 . + . ID=g8321.t1.exon11;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 14318 14417 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 14550 14832 . + . ID=g8321.t1.exon12;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 14550 14832 . + 2 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 14952 15021 . + . ID=g8321.t1.exon13;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 14952 15021 . + 1 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 15337 15470 . + . ID=g8321.t1.exon14;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 15337 15470 . + 0 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . exon 15634 16547 . + . ID=g8321.t1.exon15;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . CDS 15634 16315 . + 1 ID=cds.g8321.t1;Parent=g8321.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 16316 16547 . + . ID=g8321.t1.utr3p1;Parent=g8321.t1 #PROT g8321.t1 g8321 MALKSIIVNIHEVEELVTFPSDIDTEDLVELFRSAALANTSDVLQLRAANSRAIVPITCDLAENDRSSPYVLTVVQAPKQVEGGRTRKVSAFYQQRMEELRSMSRSNLNAPYGSRGNLVPPSDDESDCEGADSMPPRLPLNTNMGPAPAVAPAIAHRQPAARRDSITSFGLSFAPGRKTSMAIGGRMTQPGRSNEKAIGMDLPSSVTSRLRKNSVFAEEGSRKARLLSDVRHVTKEHLETLQAEARRVREVELAELRPRFLIAHDSRFAQVWTTTYLTAMVIDAFVIPFAIAFPEGNDGVPIGLLITYIMDLVLIADIFLRFQWEYMDGERRVDTAREISRHYRKKQFRWDVFGVFPFDFIALGYGGVYLLPLLRLNRLVNLPKIFRHFKAEENDIKRETGMIRVRMYIIGGFLIMHVLACIWHLISCYPTIDGNLTHCRRNGWVSASDGQIGDSKFSAYISSLYWTVCSMTSVGYGDILAQNDYERIYACIVMILGVCLFSFVMGNVASAVASADAMRDEFRQKVRTVRQYMAYHDIRADLQMAIDDYYANEWNIKHGVDTSFYNSLPEAFRAEIALEINRKQLVKVPVFLDCNEDILKELALRMRPTSILANKFILRRGEESHDMFFLMEGLVRVISEDDGTVYAELGKGNFFGEVGVLFDLPRTATVITASHCDMFLLGKEDMLDVVARFEPLKDKLNQCAGERLMWFKKHRYVDTGNDFGGNLEMEMNLENLRKVDLFRDCGDEELLRELSAAMETIMYEPGDLIIKKGTIGHEMFFINRGTVIITGDSEDQIFATVGEGAYFGEIGILFSVPRIANVRAVSHCHLMVLFKETFDMIMDNHPEIRERIMETANRRMNKPVAAKDDKQNALQRTLRRMSHIGPLLRSKRSAVGPMPDADADEIGEFDVSETPDAASGPSTNSNSVENPRGLLHVPSGDAAPLSPIASPNAPASVEPRGERAPLPGPGSRSGSSTAASSILNINSPGADGAGISLPSTTPLSPKATD* # ORIGINAL: g8320.t1 original gene structure, not modified by PASA NODE_53_length_49015_cov_52.4253 AUGUSTUS gene 5721 9269 . + . ID=g8320;Name=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS mRNA 5721 9269 . + . ID=g8320.t1;Parent=g8320;Name=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 5721 6015 . + . ID=g8320.t1.exon1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 5721 6015 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 6163 6239 . + . ID=g8320.t1.exon2;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 6163 6239 . + 2 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 6542 6690 . + . ID=g8320.t1.exon3;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 6542 6690 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 6821 6872 . + . ID=g8320.t1.exon4;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 6821 6872 . + 1 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 7202 7309 . + . ID=g8320.t1.exon5;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 7202 7309 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 7501 7593 . + . ID=g8320.t1.exon6;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 7501 7593 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 7884 8039 . + . ID=g8320.t1.exon7;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 7884 8039 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 8227 8506 . + . ID=g8320.t1.exon8;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 8227 8506 . + 0 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 8641 8775 . + . ID=g8320.t1.exon9;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 8641 8775 . + 2 ID=cds.g8320.t1;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 8938 9269 . + . ID=g8320.t1.exon10;Parent=g8320.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 8938 9269 . + 2 ID=cds.g8320.t1;Parent=g8320.t1 #PROT g8320.t1 g8320 MAGAGGKAGAQGSRSSAQELSLLDFLNDEDNTSTSAADADAGSIDRDKAVEDSRRSKAAAVELGRVRELVFTDADIARIVKCQAAVRRRLCRITYRKLSRRTLIMRELLETEGTYVKTLRLIDRWYIRPLTAHALQSPGHDFVILTAEEIDTLFSEIPELCKVHMALLNRLQERMDKWSAFQTIGDIFLDMTSANLDMYTVYVSNFDAAAAVISAHKTDSLFKKFLDEKRDFHGVKDSLSDLLITPVQRIPRYVMLLEQILKQTPSGHPDHVNLTLALQHIRRVAHIINDRKRAVQIVEDIQTRVLGLPESIVDAERYLALEADAIEVKSGRQKLRRLFLFNDVLLCTTPRMAGFSFSFSAKPLINQYQYKWKINLSDLDLKDSPQSVTLSKGIFGGGGDVVTENQYGGVLQLMHWKTVGSETITFQMKVDEAPIWADKILDLKKGLKDSRSRTSSFLHQAVLKKRDTMKRRLTVKRNAIPKFGASTSPTGSPNSSPSPQQRGLLAPGNGENGSMLVMSKFNRMTSSMSDLPSVAGTNSELREMLGRKLSQARGHRGP* # PASA_UPDATE: g8318.t1, single gene model update, valid-1, status:[pasa:asmbl_8045,status:3], valid-1 NODE_53_length_49015_cov_52.4253 . gene 189 3005 . + . ID=g8318;Name=g8318.t1 NODE_53_length_49015_cov_52.4253 . mRNA 189 3005 . + . ID=g8318.t1;Parent=g8318;Name=g8318.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 189 252 . + . ID=g8318.t1.utr5p1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 189 361 . + . ID=g8318.t1.exon1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 253 361 . + 0 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 499 571 . + . ID=g8318.t1.exon2;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 499 571 . + 2 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 711 938 . + . ID=g8318.t1.exon3;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 711 938 . + 1 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 1055 1124 . + . ID=g8318.t1.exon4;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 1055 1124 . + 1 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 1316 1499 . + . ID=g8318.t1.exon5;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 1316 1499 . + 0 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 1733 1950 . + . ID=g8318.t1.exon6;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 1733 1950 . + 2 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 2075 2589 . + . ID=g8318.t1.exon7;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 2075 2589 . + 0 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . exon 2734 3005 . + . ID=g8318.t1.exon8;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . CDS 2734 2785 . + 1 ID=cds.g8318.t1;Parent=g8318.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 2786 3005 . + . ID=g8318.t1.utr3p1;Parent=g8318.t1 #PROT g8318.t1 g8318 MAEAAFNETLQWTFGLIASTGKYLTAETFGNQINANGPNLKKKQIFTLEQDAGSPVVYVKSHLGKYFSATEKGVFTADQDSKGKNEQWSVEPQSDGKWAFKSAHGYFLGGSADKLSAFGRSIGETEKWTIHLAMHPQVVLRNVGRKRYVQLQDEELRVVADIPWGVPALITLEFHDGKYSLRASNNKFLHKDGKLVDSLDDNSKYIIEFLESRIALKASDGKYLQAYGPKATLAAKKDKITKDELFELEDSHPQVTLVAHNGRFVTSTQIEETKADQREVKDTEIFQLEPHGDKWAFRNNKGFYWSLAGSNISGNAKSRGANELFSVVWHGTQISIKASNGKFISAKPNGQMSASADAGEEKEKYTITLINRPQLVLRGEYGFLASKARNVISSASVTPEIFHVEAKEGKYSFRGANGKYWKEEGDGQWATSGDAAVEFTVEIHDHSKLSLRATNGKFFHGEQHGGFKATADKADKDELLEY* # PASA_UPDATE: g8328.t1, single gene model update, valid-1, status:[pasa:asmbl_8055,status:12], valid-1 NODE_53_length_49015_cov_52.4253 . gene 36993 39279 . + . ID=g8328;Name=g8328.t1 NODE_53_length_49015_cov_52.4253 . mRNA 36993 39279 . + . ID=g8328.t1;Parent=g8328;Name=g8328.t1 NODE_53_length_49015_cov_52.4253 . exon 36993 39279 . + . ID=g8328.t1.exon1;Parent=g8328.t1 NODE_53_length_49015_cov_52.4253 . CDS 36993 38501 . + 0 ID=cds.g8328.t1;Parent=g8328.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 38502 39279 . + . ID=g8328.t1.utr3p1;Parent=g8328.t1 #PROT g8328.t1 g8328 MSEEFLFYKTFITLYQSKATVFSPPAPLDSRGRAPLTALKMLAAGRRNGQHLLNLISPASTSTLAWCPRPARRTLDALTIQSHTHTHIHVRLISSSVSQLRPKYWTWEDDYDIAQPAMQTVAQAKPQQTPIAEDESGSPAGERQRTVLRTTTFSRDSGTRSLPDVNLRRVLVVSKQTRYEYERARYEASSDNDVRTLLAKRGSDYEGLKLRHDIHTRGLEVMLREIERRGVEARVVRSSELSEDDVHGVDAVFSAGGDGIFLQAAGKIYGDVPAIGVNTDPERSAGHLCIRVAWVGPLLDRILSGTMKWMWRQRMRVSLIDADKKTVLRQRALNEIMIAESNPWRTSYYEMFFDGRGGEKQKSSGLIVCTGTGSTAWLSNIAKIDAEKVRSLLEIAGCREDARSGVRDPAEIAAQFNASIARDPAEPRMQFVVREPIVNGIFGVSQQRGFAKEIVVRSRGWDMRLVIDGASTFVFNDGRTALVEMPEEDAVLTPAKNWRDDP* # PASA_UPDATE: g8324.t1, single gene model update, valid-1, status:[pasa:asmbl_8051,status:3], valid-1 NODE_53_length_49015_cov_52.4253 . gene 22303 26458 . - . ID=g8324;Name=g8324.t1 NODE_53_length_49015_cov_52.4253 . mRNA 22303 26458 . - . ID=g8324.t1;Parent=g8324;Name=g8324.t1 NODE_53_length_49015_cov_52.4253 . five_prime_UTR 26407 26458 . - . ID=g8324.t1.utr5p1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 26394 26458 . - . ID=g8324.t1.exon1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 26394 26406 . - 0 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 26177 26301 . - . ID=g8324.t1.exon2;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 26177 26301 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 25723 25817 . - . ID=g8324.t1.exon3;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 25723 25817 . - 0 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 25538 25631 . - . ID=g8324.t1.exon4;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 25538 25631 . - 1 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 25267 25393 . - . ID=g8324.t1.exon5;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 25267 25393 . - 0 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 24581 24716 . - . ID=g8324.t1.exon6;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 24581 24716 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 24215 24326 . - . ID=g8324.t1.exon7;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 24215 24326 . - 1 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 23999 24008 . - . ID=g8324.t1.exon8;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 23999 24008 . - 0 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 23524 23721 . - . ID=g8324.t1.exon9;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 23524 23721 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 23133 23318 . - . ID=g8324.t1.exon10;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 23133 23318 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 22675 22950 . - . ID=g8324.t1.exon11;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 22675 22950 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . exon 22303 22493 . - . ID=g8324.t1.exon12;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . CDS 22426 22493 . - 2 ID=cds.g8324.t1;Parent=g8324.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 22303 22425 . - . ID=g8324.t1.utr3p1;Parent=g8324.t1 #PROT g8324.t1 g8324 MGVQDYCKTRIICTVGPETASVEVLQGLIEAGMDVLRVNMSHSTAEFARQVMVNLAKARTPSGKEIGVCFDLNGPKIRTGKLKDGKAVQLQAGSRFHFMNKDVEGDETQISTTYHGRIVSPGDKIFVDDGRISFTVVAHNGDDVETIVDNSGMLHEHKGVNIPMGDFALSAISEQDAKDIALALDCGVDFIAQSNVRSASDVMEVRMMLGNARVKVIAKIENKQGLERVDEILKVSDGLMLMRGYLGVEVPIETIALVQKQIVNKCNLAGKPVIIADQVLVTMVKRPIPTRAESTDTFNAVIDGTDGLMLSAETAIGAYPMESVRMCRKICHSAEQSIDYEELYYGLRRQVKLPIPVFESVASSAVKSARDVAATAIITITDTGRTARALSKYRPAVPVLVVTPNAATARQCQISKSLLPIVMAFPEDDQNDPSDAAIEQAVRLGYVRRNDNIIVLTDVIDDVNFAEMEHIMMMKIRQA* # ORIGINAL: g8326.t1 original gene structure, not modified by PASA NODE_53_length_49015_cov_52.4253 AUGUSTUS gene 30306 31769 . + . ID=g8326;Name=g8326.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS mRNA 30306 31769 . + . ID=g8326.t1;Parent=g8326;Name=g8326.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS exon 30306 31769 . + . ID=g8326.t1.exon1;Parent=g8326.t1 NODE_53_length_49015_cov_52.4253 AUGUSTUS CDS 30306 31769 . + 0 ID=cds.g8326.t1;Parent=g8326.t1 #PROT g8326.t1 g8326 MIADGDTNAPMIERTAATVWALRCATHITDLPEPILLHILSHLDITSVLNSSLVSRQFYRISGTNSLWRSLCEGKGWTSGPNSHTFGSDGAILGRMRAANTSGGYPTAKWKLYYANGVRLMQCYRRGHFKSRMLKLPGVPSHTVSSLPTLQYDGHTFVTIAGGRIIVADMHEPSLNANVRYTLGSERADMTHVDFSAEDDLLAYGSIGGTVHVGSLSDGYPIFTLHGHRDAIQAVRVSRTVIASGARDNTVRLWSPTTGQFRAELPIQERFWALRMHNSQLLVGTANHRNVGPLQLWNMERGTMTRAITGAVRGGGVYDVLFESDAIAVSCGFDGCLRMWDLRLPFQSPCVMCFEDPDDNPMLCVQTACGVAGSAHCTDWRIVTGSRQHGIVRLWDRRMTGVTNSSTGGFRVTRGVGIARGLVCTYYSRGNRTQSSVHSLAMRGGRIFAGLHEGVCVLDFDSGEKDTAPPTFGIRGDIESMSIAAPQ* # PASA_UPDATE: g8325.t1, single gene model update, valid-1, status:[pasa:asmbl_8049,status:12], valid-1 NODE_53_length_49015_cov_52.4253 . gene 26808 30166 . + . ID=g8325;Name=g8325.t1 NODE_53_length_49015_cov_52.4253 . mRNA 26808 30166 . + . ID=g8325.t1;Parent=g8325;Name=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 26808 26875 . + . ID=g8325.t1.exon1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 26808 26875 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 26995 27072 . + . ID=g8325.t1.exon2;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 26995 27072 . + 1 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 27244 27336 . + . ID=g8325.t1.exon3;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 27244 27336 . + 1 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 27459 27549 . + . ID=g8325.t1.exon4;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 27459 27549 . + 1 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 27674 27808 . + . ID=g8325.t1.exon5;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 27674 27808 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 28023 28188 . + . ID=g8325.t1.exon6;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 28023 28188 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 28370 28530 . + . ID=g8325.t1.exon7;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 28370 28530 . + 2 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 28696 28755 . + . ID=g8325.t1.exon8;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 28696 28755 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 28974 29072 . + . ID=g8325.t1.exon9;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 28974 29072 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 29217 29684 . + . ID=g8325.t1.exon10;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 29217 29684 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . exon 29872 30166 . + . ID=g8325.t1.exon11;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . CDS 29872 30069 . + 0 ID=cds.g8325.t1;Parent=g8325.t1 NODE_53_length_49015_cov_52.4253 . three_prime_UTR 30070 30166 . + . ID=g8325.t1.utr3p1;Parent=g8325.t1 #PROT g8325.t1 g8325 MKNFRASILGKKEDKLVEAAANGDLEKLQGIVKKKNTSVNKEDPEGRTALYMASKNGRKDCVEFLLSLDADANLADKSQRNALHVAVLGDHLECVKLLLKSSIKIDAKDENESTALHISLASASTDVAKHLLGAGASIEAVDKNGRTPLLLALAQNFAHSAKLLIEKGASVNAKDKDGITALMYACELGSEEIVQLLLKKGADAKAKDEGGQTATDYATKAGKTACVDLLQKAAPSAWGGGLAPPEKEKKTKKPDDASPVAAFEVEASPRVDRKEVEKEKPKDDGKGKAPAAATPSSGNEVQDLKATIETMRKKHKQEIKELEDDNEELDAELSKMRIVLADMEAKVIAASASSSSSGSVSADVTALRKQLADAQAERDDAKKTLQNTEALLEKGGQARQELKKKAADLEEAERKARERADAADKARAALEAEIETLKIQLASYEDRDVEHDDDDDEDVDFGDDVDLPGMGGESSKAKGDRETDAGHAQLNKKIKAMEKKYAETLDLYRSILLRACQGQLRDGLVQKIVEAGSRSQRS* # ORIGINAL: g9117.t1 original gene structure, not modified by PASA NODE_3326_length_3730_cov_36.6542 AUGUSTUS gene 1041 2966 . + . ID=g9117;Name=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS mRNA 1041 2966 . + . ID=g9117.t1;Parent=g9117;Name=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS exon 1041 1966 . + . ID=g9117.t1.exon1;Parent=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS CDS 1041 1966 . + 0 ID=cds.g9117.t1;Parent=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS exon 2217 2414 . + . ID=g9117.t1.exon2;Parent=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS CDS 2217 2414 . + 1 ID=cds.g9117.t1;Parent=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS exon 2732 2966 . + . ID=g9117.t1.exon3;Parent=g9117.t1 NODE_3326_length_3730_cov_36.6542 AUGUSTUS CDS 2732 2966 . + 1 ID=cds.g9117.t1;Parent=g9117.t1 #PROT g9117.t1 g9117 MPPRKRKTPDTDEEENVASAAATAPAKKQMRQATLFGGTTSDALKDWTMFDNSLMVRMPSDFVKRGKVASFDLDDSVITTASGKKFSKSAADWKFLYPQVPKRMQELHEEGYTLAIFSNQKGIGRGTTDKADFCEKVRRVCEQIKAPIVVLAATGDDKYRKPLPGMWDHMRSDILAGVDVSVSESFYVGDAAGRPEKWGPGRKKDFADTDRKFAVNCGLAFKTPEEFFLSQGNAPFSFAGFNPASLVYTPAEDASSGGVFGVRLDPPTASLHVAEGEKEVIINVGFPASGKTRFSRLNLVPKGYVHINRDTLGTADKCEAEAKRALAEGRSVVIDNTSPDVTTRKRYINVAKSAGARVRCFFFETKEEHARHNNRSYAARLPFDRFRYIRNLHTGDAQKAKKELIPDMAYHIFRKAFTVPTESEGFDQIVRVYFAPHFDDKEHERLYRMYLD* # PASA_UPDATE: g9116.t1, single gene model update, valid-1, status:[pasa:asmbl_5890,status:12], valid-1 NODE_3326_length_3730_cov_36.6542 . gene 53 510 . - . ID=g9116;Name=g9116.t1 NODE_3326_length_3730_cov_36.6542 . mRNA 53 510 . - . ID=g9116.t1;Parent=g9116;Name=g9116.t1 NODE_3326_length_3730_cov_36.6542 . five_prime_UTR 237 510 . - . ID=g9116.t1.utr5p1;Parent=g9116.t1 NODE_3326_length_3730_cov_36.6542 . exon 53 510 . - . ID=g9116.t1.exon1;Parent=g9116.t1 NODE_3326_length_3730_cov_36.6542 . CDS 53 236 . - 0 ID=cds.g9116.t1;Parent=g9116.t1;3_prime_partial=true #PROT g9116.t1 g9116 MGSVRDLESRVIALKLLYLIPSFYAIYFILSAVLCGAFRLDFDGRMPFDFDNFGFGSRRET # ORIGINAL: g1712.t1 original gene structure, not modified by PASA NODE_9816_length_322_cov_197.405 AUGUSTUS gene 1 295 . - . ID=g1712;Name=g1712.t1 NODE_9816_length_322_cov_197.405 AUGUSTUS mRNA 1 295 . - . ID=g1712.t1;Parent=g1712;Name=g1712.t1 NODE_9816_length_322_cov_197.405 AUGUSTUS exon 259 295 . - . ID=g1712.t1.exon1;Parent=g1712.t1 NODE_9816_length_322_cov_197.405 AUGUSTUS CDS 259 295 . - 0 ID=cds.g1712.t1;Parent=g1712.t1 NODE_9816_length_322_cov_197.405 AUGUSTUS exon 1 71 . - . ID=g1712.t1.exon2;Parent=g1712.t1 NODE_9816_length_322_cov_197.405 AUGUSTUS CDS 1 71 . - 2 ID=cds.g1712.t1;Parent=g1712.t1 #PROT g1712.t1 g1712 MIFGSESIDVNSAPDWASFNQEGYYPMESTLLAAKK # PASA_UPDATE: g3399.t1, single gene model update, valid-1, status:[pasa:asmbl_4311,status:12],[pasa:asmbl_4312,status:12], valid-1 NODE_2438_length_6283_cov_34.1999 . gene 1261 6196 . - . ID=g3399;Name=g3399.t1 NODE_2438_length_6283_cov_34.1999 . mRNA 1261 6196 . - . ID=g3399.t1;Parent=g3399;Name=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 6111 6196 . - . ID=g3399.t1.exon1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 6111 6196 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 5445 5949 . - . ID=g3399.t1.exon2;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 5445 5949 . - 1 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 5051 5250 . - . ID=g3399.t1.exon3;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 5051 5250 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 3962 4888 . - . ID=g3399.t1.exon4;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 3962 4888 . - 1 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 3519 3651 . - . ID=g3399.t1.exon5;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 3519 3651 . - 1 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 3301 3366 . - . ID=g3399.t1.exon6;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 3301 3366 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 2922 2984 . - . ID=g3399.t1.exon7;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 2922 2984 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 2611 2775 . - . ID=g3399.t1.exon8;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 2611 2775 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 2023 2436 . - . ID=g3399.t1.exon9;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 2023 2436 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . exon 1261 1793 . - . ID=g3399.t1.exon10;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . CDS 1737 1793 . - 0 ID=cds.g3399.t1;Parent=g3399.t1 NODE_2438_length_6283_cov_34.1999 . three_prime_UTR 1261 1736 . - . ID=g3399.t1.utr3p1;Parent=g3399.t1 #PROT g3399.t1 g3399 MQNKRRSLHTKDLGSSGYREGMVHHGPSACTPHYIRCIKPNDNKSKTEFNQKRVLHQVRYLGLLENIRVRRAGFAYRQVYDKFLERFFLLSRRTSYAGDYIWQGDAKSGTKCILEDCGISKDEWQMGTTKTFLRHPETLWALEHLRERYWHNMAMKIQRAWKNFLRYKHECATRIQRAYRKWVGGKTLYEVRDYGHQVLNFRKERRRFSLVSMRRFMGDYLEIRSNPVVYNACGNQIHNENVIFSGECEILIHRMLRSSLLAPRFLVATDQAVYIVVTIIEKNMAKTQLERRIPLRSIGSVSLSPFMDDYVVIHVPAEYDTVLTTTLKTEFVTMLAYYLGGNLRVDINPIVEFAKKPGKKTPLTFAKDEMCAQALFKKNKITIRSGCAANSVSDPPCRRKQKPAKPVTQGRLLKKAGSGAAAGPAPSAASGARKPAPAAPVHAPAPAAASGARKPAPAAPGPSKPSQPKPPQPQHNNNDDEEEFQPPPPKAAPQAKAQPIKAAPSPAQPKMAPPVPKAKEPEPEPPKPKSLGRYKTQFAYEKQDPGELSFPGGAILEILQKDENGWWLATHGSEEGWVPSNYLVEVVEEKPKPPPPVAKAAPPKPSPAVSKPAPSDEASAPSPKPAMIVPNPAALKPAGGAAPKPTAPKPAPKREEDEDAPSSPQVGRVLDGPKPKGFNMPSNVPSAQPAWKSELAARKTAPAPPAATTPAAEEEPEPSFKPALKPTPKPAAAAAAPASPAAPRQAIVPPKPAGGAAPPGITPKPAVTSKPATPAPAAPPTDTPAAASPKPAPIALKPAAAPRPSGDAGAPAKPPMSPKPAAAAPGKPPMSPKPAMSPKPAAGIPAPKPHPIARRPPSDDEAEKNDDDDWN* # ORIGINAL: g3398.t1 original gene structure, not modified by PASA NODE_2438_length_6283_cov_34.1999 AUGUSTUS gene 262 930 . + . ID=g3398;Name=g3398.t1 NODE_2438_length_6283_cov_34.1999 AUGUSTUS mRNA 262 930 . + . ID=g3398.t1;Parent=g3398;Name=g3398.t1 NODE_2438_length_6283_cov_34.1999 AUGUSTUS exon 262 529 . + . ID=g3398.t1.exon1;Parent=g3398.t1 NODE_2438_length_6283_cov_34.1999 AUGUSTUS CDS 262 529 . + 0 ID=cds.g3398.t1;Parent=g3398.t1 NODE_2438_length_6283_cov_34.1999 AUGUSTUS exon 761 930 . + . ID=g3398.t1.exon2;Parent=g3398.t1 NODE_2438_length_6283_cov_34.1999 AUGUSTUS CDS 761 930 . + 2 ID=cds.g3398.t1;Parent=g3398.t1 #PROT g3398.t1 g3398 MECRRRQGRCEQDTSYATFKTHQWHPAEIDVDESGRASIRSYINNLHPYHHRELYGTIASIFECFAPLLSCVLTDMVEPRGLRLRIFYNGHRSAWAAPLELVHGIMDHLEWPMSMEVAKKGPGSLTAGRKYFVVGAHWHALRLDI* # ORIGINAL: g7809.t1 original gene structure, not modified by PASA NODE_3856_length_2618_cov_36.2029 AUGUSTUS gene 385 1940 . + . ID=g7809;Name=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS mRNA 385 1940 . + . ID=g7809.t1;Parent=g7809;Name=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS exon 385 519 . + . ID=g7809.t1.exon1;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS CDS 385 519 . + 0 ID=cds.g7809.t1;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS exon 830 990 . + . ID=g7809.t1.exon2;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS CDS 830 990 . + 0 ID=cds.g7809.t1;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS exon 1306 1406 . + . ID=g7809.t1.exon3;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS CDS 1306 1406 . + 1 ID=cds.g7809.t1;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS exon 1741 1940 . + . ID=g7809.t1.exon4;Parent=g7809.t1 NODE_3856_length_2618_cov_36.2029 AUGUSTUS CDS 1741 1940 . + 2 ID=cds.g7809.t1;Parent=g7809.t1 #PROT g7809.t1 g7809 MLMGEHHTVRTSTTVWDCALVLSKYLEDGVRKGSVSIDGKNVVELGAGTGIVGMSVALLGAASVVISDVSSVVPALNRNIVATGVQSVATACALDWTSEEDITCMNAPFDVIVCADVVWVDELIAPLVHVIDELSSAHTAVYFAHQTRSSRADIKLFALMKAAGFTWDEIPRDDYDGVYRSDRIRVYIFRKTPPPANE* # ORIGINAL: g7467.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 173 1939 . - . ID=g7467;Name=g7467.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 173 1939 . - . ID=g7467.t1;Parent=g7467;Name=g7467.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 173 1939 . - . ID=g7467.t1.exon1;Parent=g7467.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 173 1939 . - 0 ID=cds.g7467.t1;Parent=g7467.t1 #PROT g7467.t1 g7467 MASRKFFVLGLGYCGTRMAESLVKEGGWVVAGSVRNREAIPAFEAKGVKAYFLDTSEDANIEELRRSAAVALEGTTHILATAAPGENGDPFLEHIGDLIKGLPNVKWVGYLSTTATYGDKDGAWIDETSELRPTSARGKKRVDAENAWLSLGLPVHIFRLPGIYGPTRGPIERVRSRQARRVFKKGQYFSRIHVDDIVQTLRKSIDKPHPGEAYNVCDDEPAPGHVVIEHACLVLGVEPPPLVPFEDADLTPMARSFYSENKRVANRKIKDELGVQLLYPTYREGQAAQLAEEIAMGLAGPPTTDNVSQLAGTLPSAGAGRVVPSTSSPIGSPVARVAAIVAGFGHFLLKIPILGRFFSVFGRLVFLPTLRLFGLGVGTATAAASTPAAVASSPFRAPRRTFTPDEIAVMLVDNGSLRAASTLNLRRIASELAPLLNRPVFPVSMQFSDRISASQLDGVKADTFDPLFRELVAGGCKSIVVVPLMIGPNHSIMHTIPNLASDIVRLNPGLSVRVADSLVLVDAARSGDDRVALIMADHVISAIASLPASADGSQNRPLVVVVDHGTPLKWVNRARGVITEHLTRLLGNR # PASA_UPDATE: g7473.t1, single gene model update, valid-1, status:[pasa:asmbl_5907,status:3], valid-1 NODE_333_length_26727_cov_42.302 . gene 18539 20605 . - . ID=g7473;Name=g7473.t1 NODE_333_length_26727_cov_42.302 . mRNA 18539 20605 . - . ID=g7473.t1;Parent=g7473;Name=g7473.t1 NODE_333_length_26727_cov_42.302 . five_prime_UTR 20557 20605 . - . ID=g7473.t1.utr5p1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 20224 20605 . - . ID=g7473.t1.exon1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 20224 20556 . - 0 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 19874 20019 . - . ID=g7473.t1.exon2;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 19874 20019 . - 0 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 19563 19667 . - . ID=g7473.t1.exon3;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 19563 19667 . - 1 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 19216 19309 . - . ID=g7473.t1.exon4;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 19216 19309 . - 1 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 18924 19039 . - . ID=g7473.t1.exon5;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 18924 19039 . - 0 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . exon 18539 18699 . - . ID=g7473.t1.exon6;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . CDS 18594 18699 . - 1 ID=cds.g7473.t1;Parent=g7473.t1 NODE_333_length_26727_cov_42.302 . three_prime_UTR 18539 18593 . - . ID=g7473.t1.utr3p1;Parent=g7473.t1 #PROT g7473.t1 g7473 MLASTLRSAPLRSVSVTLSRVMYGAHARSMSTDGASPSSSGFTTVQKDAATGIAVLTMNKKPVNSLNLELLTELGDTLKQLESDRSVRGLILASNMKNIFSAGLDIMEMYKPKPDRLDKFWRSLQDAWIALYGTRLATVAAIEGESPAGGCMLAMSCDYRVMAQGGFKIGLNETKLGIVAPFWFIDVMTNTIGHRQSERLLELGAMVGTDEAMRIGLIDEVVAQEKVLTRAREVLSDQFLKIPDVARGLTKQAIRRQTIQKLVERKDQDVVNFAKFATADAVQKSLDGYMEQLKKKKAQ* # ORIGINAL: g7472.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 14961 17416 . - . ID=g7472;Name=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 14961 17416 . - . ID=g7472.t1;Parent=g7472;Name=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 17301 17416 . - . ID=g7472.t1.exon1;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 17301 17416 . - 0 ID=cds.g7472.t1;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 16838 16936 . - . ID=g7472.t1.exon2;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 16838 16936 . - 1 ID=cds.g7472.t1;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 16394 16620 . - . ID=g7472.t1.exon3;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 16394 16620 . - 1 ID=cds.g7472.t1;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 15743 15954 . - . ID=g7472.t1.exon4;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 15743 15954 . - 2 ID=cds.g7472.t1;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 14961 15539 . - . ID=g7472.t1.exon5;Parent=g7472.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 14961 15539 . - 0 ID=cds.g7472.t1;Parent=g7472.t1 #PROT g7472.t1 g7472 MGLLEDRFTVGTFPSVGFFEGTEKLLEVQFEPADATGLRRIPKADWQVLLDKVGCTIVSEAHNEYFDAYVLSESSLFVASHRIVIKTCGTTNLLPALPLVRGMARDRCGLADVRNVFFSRRSFLQPHAQPSPHSAFDEELAFLEGMFDGVSFTFDAPEGESGPSWHLFTTDIHHRRAADGVDGSFCDSTIELMMGDLHPDAMKQFYRLHCQNAQSVTESSGISALIPGSLIDPVLFDPCGYSANGLNGGVYFTIHITPQQDCSYVSFETNLPPALVKGTRNTFSYDVLVANVLRVFRPGRFDMAVVCAGACNTPHNNINSGQLQSHVTGSGPVLLNAASLVTQSGVESLGFSRVSSTSSRTANYTVLHSAYTRTNKVLCDVHKDVDSGSDDSSSIDGGSSCDENGDNIFT* # PASA_UPDATE: g7471.t1, single gene model update, valid-1, status:[pasa:asmbl_5906,status:12], valid-1 NODE_333_length_26727_cov_42.302 . gene 10283 14410 . + . ID=g7471;Name=g7471.t1 NODE_333_length_26727_cov_42.302 . mRNA 10283 14410 . + . ID=g7471.t1;Parent=g7471;Name=g7471.t1 NODE_333_length_26727_cov_42.302 . exon 10283 10590 . + . ID=g7471.t1.exon1;Parent=g7471.t1 NODE_333_length_26727_cov_42.302 . CDS 10283 10590 . + 0 ID=cds.g7471.t1;Parent=g7471.t1 NODE_333_length_26727_cov_42.302 . exon 10760 14410 . + . ID=g7471.t1.exon2;Parent=g7471.t1 NODE_333_length_26727_cov_42.302 . CDS 10760 14210 . + 1 ID=cds.g7471.t1;Parent=g7471.t1 NODE_333_length_26727_cov_42.302 . three_prime_UTR 14211 14410 . + . ID=g7471.t1.utr3p1;Parent=g7471.t1 #PROT g7471.t1 g7471 MAATTHEDIEKQIREMQAKRAALGGAQGDKVALGAAGAFDTDIYQAPARDVSGYVDSIAADDAMEDEEVVVGGNKRTSYTAPKELLDARTDGTDDVDPFADTRRKRIADREDEYHARRMHRMLSPERVDAFAGGKTPDVSIRTYKDAMADVALSRDKQEVIRKLKEKAEDGTLVAVEQPLKPAASAAAAGGAPPAKRRRWDEPTPMHVDAAEQTAGTTTTTTRSQWDVEEPATIGGGSRWDETPARKRSRWDETPAADRMGGDGGVEETPSTASRRRSRWDETPVNSNGGATPAYMGATPVGNSALGLATPVVSSGGSGLAIPMTPDQVAAQRWERELDERNRPLSDAELDAMFPQEGYKIVDPPASYQPIRTPSRRLMATPTPMSGQSGFYMPEEDRTQNYGIEKQPEGNLPFMKPEDTQYFGKLLKEVDEAALSPEEAKERKIMRLLLKIKNGTPPMRKAALRQITDKARDFGAGALFNQILPLLMSPALEDQERHLLVKVIDRILYKLDDLVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNVDEYVRNTTARAFSVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIGHGLTDEQQKVRTITSLAIAALAEAATPYGIESFDSVLEPLVKGIRQHRGKGLAAFLKAVGYLIPLMDAAYAAYYTKEVMLILVREFASPDEEMKKIVLKVVKQCTGTEGVEADYLKQEILPKFFENFWVRRMALDRRNYRQLVDTTVELANKVGASEIVRRIVNDLKDESEPYRKMVMEAVEKIVSNLGTSDIDPRLEEQLIDGILYAFQEQTTEDNVMLNGFGTVVNALALRVKPYLPQICGTILWRLNNKSAKVRQQAADLIARIAVVMMSCGEEKLMSHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVAPREWMRICFELLELLKAHKKSIRRAAVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDAVHRQTACSAVKHMALGVYGFGCEDALTHLLNLIWPNIFEVSPHVINAVLEAVDGIRVSLGPCRTLQYVLQGLFHPARKVRDVYWKIYNSLYIGAQDALVAFYPRVFNDEKNTFVRTELDYFI* # PASA_UPDATE: g7470.t1, single gene model update, valid-1, status:[pasa:asmbl_5905,status:12], valid-1 NODE_333_length_26727_cov_42.302 . gene 7503 9641 . + . ID=g7470;Name=g7470.t1 NODE_333_length_26727_cov_42.302 . mRNA 7503 9641 . + . ID=g7470.t1;Parent=g7470;Name=g7470.t1 NODE_333_length_26727_cov_42.302 . exon 7503 9641 . + . ID=g7470.t1.exon1;Parent=g7470.t1 NODE_333_length_26727_cov_42.302 . CDS 7503 9491 . + 0 ID=cds.g7470.t1;Parent=g7470.t1 NODE_333_length_26727_cov_42.302 . three_prime_UTR 9492 9641 . + . ID=g7470.t1.utr3p1;Parent=g7470.t1 #PROT g7470.t1 g7470 MPASADFSAPVAQVPVLNLDAKIAQFKADVEAHISKYDPARVIVVSAWLVSDNVIIDLFRRHTNIFPTVVGVDTLHIFPETFQTIKDAENKYNFTAKIYKPKGCETLEDFNRIYGRHEILTNADFDKHSKVDPLILAFEDLKKEVAVTGRRADQGNARAELAVWEEDKKTFNPLADWSWDEVASYVLQNDVPYISLHRRLLVSDVPIKAINRDTFQGFRTVELDRPYFAYPAEFIRSQGPNVYVWKSFGDTHTSVAVEVHESERSGRFVGRLQTECGIHTRVAGKGAPHGGVLVDLVVPEAESNANLATKTLELNERQVCDFELLAVGGFSPLTGFMTETQYNTVVEEHRLPEGQLFGLPVVLDTDREDIAVGDYVLLTSTEFGARGVIKVESKWIPDRRREALKCHGTESEEHPANQHIYNERNKFNIGGRVWATKLPTRDWVTCKTPRQVRAEKTRQNMVAFQSRNPLHKAHATMVIKVAQDYDADVLVHPVIGPTKFDDIPAKWRKLTYDVLEKKISNVRFDYLPYSMMVAGPREALQHALIRKNYGCTHMIVGRDHAGCKDAKGKDFYGPYDAQDFMTPLQKELGLEIVPFHAMVFVDELNEYVAEEIAKEKSFKPLNISGTQFRKMLASGDDIPEWFAYPEVVSILREYVRTTDAMA* # ORIGINAL: g7475.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 24853 26563 . - . ID=g7475;Name=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 24853 26563 . - . ID=g7475.t1;Parent=g7475;Name=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 26519 26563 . - . ID=g7475.t1.exon1;Parent=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 26519 26563 . - 0 ID=cds.g7475.t1;Parent=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 26132 26284 . - . ID=g7475.t1.exon2;Parent=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 26132 26284 . - 0 ID=cds.g7475.t1;Parent=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 24853 25839 . - . ID=g7475.t1.exon3;Parent=g7475.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 24853 25839 . - 0 ID=cds.g7475.t1;Parent=g7475.t1 #PROT g7475.t1 g7475 MSKYDLRAAEDIMAEIDKWTNNASVGDTRVFPVHGTKARILTAIEINKKDAKGVYANPHAVHDSVKVTRIDPAARQDRNNIVDTAVGSIDNYAGFSNVIDYLSATGKPVVGHNAELDLLLSHEHFHERLPSDEGSYKESIRKLFRQFYDTKFITRKLSRESAVGAFPFVGTNDSTALDSVYDRVVEWMKEAPNRLRIEHSAETSRYADGISHAHEAGYDAMMTGVVFAGLVRHVGSAPNVAVPASVGGAVEDGAAPALLPDVLVNRLNGMRTLCSHIDLTGEDPLPDDIVCFVVSGVGAKDGRLEKDRLVKSFGEEGWPYVTFVAPEADNAAEQEMAVVILAEARRGADDIVAAFATSFSEEFKIVRVVDVSEAKALAAAAAGRTRTKSASSSS* # ORIGINAL: g7468.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 2562 5081 . + . ID=g7468;Name=g7468.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 2562 5081 . + . ID=g7468.t1;Parent=g7468;Name=g7468.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 2562 5081 . + . ID=g7468.t1.exon1;Parent=g7468.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 2562 5081 . + 0 ID=cds.g7468.t1;Parent=g7468.t1 #PROT g7468.t1 g7468 MVCDPVLAGAPEVSPASIEKIQESVLARPAGITANHVLSHVGYALSDIAFVHPIPNAQYLGDAVGLIAAQNERNVHGDIPRVKTIQTAAGAGGAIHGALSAGVSVTSFVHSHSLAHITPSLYAIARESLPAVFHVAARSIDGSLVVRNDHTDVLALRQTGAVIVSSASAQEAHDIAVAAHIAAAQFRVPVIHFFDGTTVPSADAGIIDVLSTERLAAVISDIERNGISGNSSVDSLFSTLALTAFSGRTYSAFEYHGPADAKTVIVLLAADAGAVTSILSAGKVGVINVRVYRPFHAAGFLAKLPSTVRRIAVVDRTTDATSVHGPLFLDVCATLQAARSQSALHSVRVAPGVTGTAVIGAVAAHLATETPLRHFGVGTGENTDVLAIEDAAVSFVSVNLYEEIDAAALVKQQDEAADNAPEGIDRKILRRHEVYWPLLFPTAYEKQQATRPDLEETTFTVTVTENRRLTPDNYDRNVFHLEFDTADSGLTYEIGDALGVHGHNDPAEVDDFIDYYGVNPDGIVSQPLHGDHTKVSLRTVRQVLLQESDLFGRPTKAFYAELAKYATNAAEKTALELIAGPDGAAEFKRRVEETTTFADVLREFRSARPPIERLFGLVPEIKPRHYSIASSQRMHPNSVHLLVVLVEWETPAGRKRVGQCTRYLASLAGGSNVTVSIKPSVMKLPPLDSQPVIMAGLGTGMAPFRAFIQERAVRRAEGHEVGPMSLYFGSRSRHMEYLYGEELEAYHADGILTNLRLAFSRDGPDKVYIQHKIEEDKATVGDYLLAREGHFYLCGPTWPAADVRDAITGAFEAAGLGATEASDEIERLKEDGRYILEVY* # ORIGINAL: g7469.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 5469 6604 . - . ID=g7469;Name=g7469.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 5469 6604 . - . ID=g7469.t1;Parent=g7469;Name=g7469.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 6305 6604 . - . ID=g7469.t1.exon1;Parent=g7469.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 6305 6604 . - 0 ID=cds.g7469.t1;Parent=g7469.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 5469 6098 . - . ID=g7469.t1.exon2;Parent=g7469.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 5469 6098 . - 0 ID=cds.g7469.t1;Parent=g7469.t1 #PROT g7469.t1 g7469 MTYIDGESITGPVAGSHAEPSRVDVTQDNEFTAQPRRRGRIDLVGAGPGDPELLTIAAFRAIQTADLVVTDRLVSEPILKLVKGRIKVAGKQPGRADEAQDELNAWVIDGLEQGLYVVRLKNGDPFLFGRAGEEILYFRERGFEPRVVPGVSSSLAAPSSARIPLTHRGIANQVLITTGRGRGGTIPALPPYSPERTTVFLMAVEHSKTLGAELMAIGYPGDCPAALVEKATCPEQRIVTCTVAEISEVVVREAVKAPATLIIGGVVRALDGVPVPEKRTVQNQMPVAIEALLRDYVSASDSPSILSVS* # ORIGINAL: g7474.t1 original gene structure, not modified by PASA NODE_333_length_26727_cov_42.302 AUGUSTUS gene 21654 24202 . + . ID=g7474;Name=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS mRNA 21654 24202 . + . ID=g7474.t1;Parent=g7474;Name=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 21654 21791 . + . ID=g7474.t1.exon1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 21654 21791 . + 0 ID=cds.g7474.t1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 22539 22646 . + . ID=g7474.t1.exon2;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 22539 22646 . + 0 ID=cds.g7474.t1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 22809 23003 . + . ID=g7474.t1.exon3;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 22809 23003 . + 0 ID=cds.g7474.t1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 23278 23458 . + . ID=g7474.t1.exon4;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 23278 23458 . + 0 ID=cds.g7474.t1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 23691 23758 . + . ID=g7474.t1.exon5;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 23691 23758 . + 2 ID=cds.g7474.t1;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS exon 24074 24202 . + . ID=g7474.t1.exon6;Parent=g7474.t1 NODE_333_length_26727_cov_42.302 AUGUSTUS CDS 24074 24202 . + 0 ID=cds.g7474.t1;Parent=g7474.t1 #PROT g7474.t1 g7474 MAARASTRDIKDYPTEFGRQTQSHQPGLEADMEPKPEFQFGEYKVMKAIITGGDSGIGRAVAVLFAREGADVSIVYKPEEEKVPGDITNRDFCRALVERSVQQLGGLDILVNNAAVQYTHERLEDITYEELMCTFNTNIISMFLITQAALPYMQEGGSIINSASVTAYKGSKHLVDYSSTKGAIVTFTRSLARQLVDRKIRVNAVAPGPIWTPLIVSSFSEEKVENFGKQAEMKRAGQPEEVATSYVFLASRDSTYMSGQTLHPNGGVIVNS* # ORIGINAL: g13220.t1 original gene structure, not modified by PASA NODE_4738_length_1286_cov_82.1181 AUGUSTUS gene 2 1286 . + . ID=g13220;Name=g13220.t1 NODE_4738_length_1286_cov_82.1181 AUGUSTUS mRNA 2 1286 . + . ID=g13220.t1;Parent=g13220;Name=g13220.t1 NODE_4738_length_1286_cov_82.1181 AUGUSTUS exon 2 1286 . + . ID=g13220.t1.exon1;Parent=g13220.t1 NODE_4738_length_1286_cov_82.1181 AUGUSTUS CDS 2 1286 . + 0 ID=cds.g13220.t1;Parent=g13220.t1 #PROT g13220.t1 g13220 SSAATTVTITYVNDKPILDLVPEDANTVDYVFEYTERDGAVRISSSVATVTDTDSTTLSSLIVSFTALDGLNEVLSATAGATGITVAYNSGTNTLTLSGVRSVANYRTILRTIRYENLLASPGNPTVGTRVFSFVANDGLIDSDVVTSTLQFDSVNDAPILDLNGPTAGRDSTGVYTEERGAVSIVSGLLSLTDIDGPSIDGAEVRITNALDGTDEILSANTTGTALTALYDSATFTLTISGNDSISSYRAVLATVKYNNVRDEPSPVTRIVTFRVSDTLLWSDSRTSLVTIVLINDRPIVTLPVATRSYVEDAAASTLFDNTLVFSDTDSAEFASATIFITNPQDVDAVTSLSLEELSVNDSDDIDIIFSAGKTRLVLVGPLAVADLLALVKTVKYRTRAQAPIVDVLRVINITVRDTGRLVSVARS # ORIGINAL: g2599.t1 original gene structure, not modified by PASA NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS gene 1252 1610 . + . ID=g2599;Name=g2599.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS mRNA 1252 1610 . + . ID=g2599.t1;Parent=g2599;Name=g2599.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS exon 1252 1327 . + . ID=g2599.t1.exon1;Parent=g2599.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS CDS 1252 1327 . + 0 ID=cds.g2599.t1;Parent=g2599.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS exon 1411 1610 . + . ID=g2599.t1.exon2;Parent=g2599.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS CDS 1411 1610 . + 2 ID=cds.g2599.t1;Parent=g2599.t1 #PROT g2599.t1 g2599 MYSIFNKSVETFALQDGEYSELSKQLLDGVNIDEAIEWLSKAEEQGCDDATFWLGECWAGEFPSIEDMLIAETFYSKVSGYYAEEASFEQS* # ORIGINAL: g2600.t1 original gene structure, not modified by PASA NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS gene 1782 2240 . - . ID=g2600;Name=g2600.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS mRNA 1782 2240 . - . ID=g2600.t1;Parent=g2600;Name=g2600.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS exon 1782 2240 . - . ID=g2600.t1.exon1;Parent=g2600.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS CDS 1782 2240 . - 0 ID=cds.g2600.t1;Parent=g2600.t1 #PROT g2600.t1 g2600 MNSLVVHLSRKANKVLAVSLHGDLPLSSYFGLELRMIVQLICVPSLASFSSVFAHSDFLHMYLHLVLPTIGDIEIENIRRDTESFATLELGFAILRIYNGPINDNPEFGADRFQPDKDCMSHVDKAPIDTPQATISAQPVSALLATGFNPPG* # ORIGINAL: g2601.t1 original gene structure, not modified by PASA NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS gene 3006 3248 . + . ID=g2601;Name=g2601.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS mRNA 3006 3248 . + . ID=g2601.t1;Parent=g2601;Name=g2601.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS exon 3006 3248 . + . ID=g2601.t1.exon1;Parent=g2601.t1 NODE_3394_length_3569_cov_33.0618_potentialcontaminant AUGUSTUS CDS 3006 3248 . + 0 ID=cds.g2601.t1;Parent=g2601.t1 #PROT g2601.t1 g2601 MPRTTAVLALVALFVLSLSVAAQAGPIAYAGCQTGCNTAAVSCYISAGGVMGVMSIPACNVGLGSCMATLCAPALLAPTP* # PASA_UPDATE: g3546.t1, single gene model update, valid-1, status:[pasa:asmbl_7318,status:12], valid-1 NODE_4438_length_1619_cov_31.5272 . gene 2 1491 . + . ID=g3546;Name=g3546.t1 NODE_4438_length_1619_cov_31.5272 . mRNA 2 1491 . + . ID=g3546.t1;Parent=g3546;Name=g3546.t1 NODE_4438_length_1619_cov_31.5272 . five_prime_UTR 2 3 . + . ID=g3546.t1.utr5p1;Parent=g3546.t1 NODE_4438_length_1619_cov_31.5272 . exon 2 357 . + . ID=g3546.t1.exon1;Parent=g3546.t1 NODE_4438_length_1619_cov_31.5272 . CDS 4 357 . + 0 ID=cds.g3546.t1;Parent=g3546.t1;5_prime_partial=true NODE_4438_length_1619_cov_31.5272 . exon 665 825 . + . ID=g3546.t1.exon2;Parent=g3546.t1 NODE_4438_length_1619_cov_31.5272 . CDS 665 825 . + 0 ID=cds.g3546.t1;Parent=g3546.t1 NODE_4438_length_1619_cov_31.5272 . exon 1218 1491 . + . ID=g3546.t1.exon3;Parent=g3546.t1 NODE_4438_length_1619_cov_31.5272 . CDS 1218 1491 . + 1 ID=cds.g3546.t1;Parent=g3546.t1 #PROT g3546.t1 g3546 KKKPNNKLQRKKEISDCFWILASMANETGADANGEFSRGGLSLGEYAQSYGSPSAAGRINAQFVRGSLEFLRRQYRDHVAETVARNPQRAVIGGQPTTLNHVRGFLRILFPSIPPEMEDVTHDGPFWPTVYFSLRCGDVASARAVAESVASSGGLLADFAQLMREYAESDGRLSAASTQKLLTISKRVSSRGANSGGSADPYKLTVLNLIGRLDDQTFVVPDATIEDFLWFKVRDRLTSHVALSLVVTCRLFIVVCVLVCAF* # PASA_UPDATE: g8397.t1, single gene model update, valid-1, status:[pasa:asmbl_5523,status:3], valid-1 NODE_3079_length_4380_cov_35.2606 . gene 496 3576 . + . ID=g8397;Name=g8397.t1 NODE_3079_length_4380_cov_35.2606 . mRNA 496 3576 . + . ID=g8397.t1;Parent=g8397;Name=g8397.t1 NODE_3079_length_4380_cov_35.2606 . five_prime_UTR 496 589 . + . ID=g8397.t1.utr5p1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 496 775 . + . ID=g8397.t1.exon1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 590 775 . + 0 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 924 1235 . + . ID=g8397.t1.exon2;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 924 1235 . + 0 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 1571 1861 . + . ID=g8397.t1.exon3;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 1571 1861 . + 0 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 2157 2386 . + . ID=g8397.t1.exon4;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 2157 2386 . + 0 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 2657 2818 . + . ID=g8397.t1.exon5;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 2657 2818 . + 1 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 3039 3129 . + . ID=g8397.t1.exon6;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 3039 3129 . + 1 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . exon 3307 3576 . + . ID=g8397.t1.exon7;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . CDS 3307 3480 . + 0 ID=cds.g8397.t1;Parent=g8397.t1 NODE_3079_length_4380_cov_35.2606 . three_prime_UTR 3481 3576 . + . ID=g8397.t1.utr3p1;Parent=g8397.t1 #PROT g8397.t1 g8397 MFLAAALVHRIANGRLLGGDGRDSHSRIHDGTGGRRFLNWASTFGCRPHVYAEPSTEAEIIALVRLARESGRHVRAVGAGHSPSDIACCEDYLVSLSRLNRVLHVDTDQLTVAVEAGAHLERLNAVLDEHDLALRNIGSISDITVGGALATGTHGTGVGFGIFGTQVLALRLITADGVVLECSAANNPDVFECALLNIGSLGIVVSVTLQCERAFQLRAVSYPAKVAAIEDVFALAASSEHVRMWWFPHTDSAVIWQAHRVYGAPVVDPSSYFWDRIIGYHALEWVLYVASLLPRMVPLVNAAAFWLLFRTRREVVGRSDRVFNFDCLFKQYVNEWAIPIERAPDAIRLLRAAIDKEGLTAHFPVEIRFVAADTIPLSPSYGRVTCYINIIMYRPFGRFVPFRQYWDAYERIMRALGGRPHWAKAHNERRSSLRQMYPRFDAFCAVRSRLDPQGTFENDYTARCFRDDETELVPDYSKYAL* # ORIGINAL: g768.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 8918 10319 . + . ID=g768;Name=g768.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 8918 10319 . + . ID=g768.t1;Parent=g768;Name=g768.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 8918 9141 . + . ID=g768.t1.exon1;Parent=g768.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 8918 9141 . + 0 ID=cds.g768.t1;Parent=g768.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 9341 10319 . + . ID=g768.t1.exon2;Parent=g768.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 9341 10319 . + 1 ID=cds.g768.t1;Parent=g768.t1 #PROT g768.t1 g768 MWRVTLTPQANSSSEAWLPRVLGLGDDRVCMDPGEQMVGHAVNMLVLYHLQRARDNNVNNLRAHEGMFGRDRQQKSSTTDNKRPDFWFAMDGVAILKGEEKAEMRDFDAAVVELTSKCGGLPVEAFGALDFYFAYAAAGLKVQFFVLQRGNNKTVITGQTKLFLLDNPDHRWAIINVVRNIIRLAPLMVAKLPNIRLRLYRDIGDIRDGRVVEMLEGRVKKTVDSTKKPLLLEVLLPLYRTIGKTKREGLPRVVKEAKMSRDRFSVELEPVGYHHRPEGIVQFRAFLLNLLAALTFLHNNGFVHCDIREANVVYDPRANQFILNDFESADRCGQIPASALAVWNGTGIDASKPYLAADDYRLLGHMCAKMNTPQALVQIVENLKMGHAPKPVGEAREYVW* # ORIGINAL: g769.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 14882 16806 . + . ID=g769;Name=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 14882 16806 . + . ID=g769.t1;Parent=g769;Name=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 14882 15373 . + . ID=g769.t1.exon1;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 14882 15373 . + 0 ID=cds.g769.t1;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 15800 16333 . + . ID=g769.t1.exon2;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 15800 16333 . + 0 ID=cds.g769.t1;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 16444 16520 . + . ID=g769.t1.exon3;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 16444 16520 . + 0 ID=cds.g769.t1;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 16674 16806 . + . ID=g769.t1.exon4;Parent=g769.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 16674 16806 . + 1 ID=cds.g769.t1;Parent=g769.t1 #PROT g769.t1 g769 MESLREATSGDGDAFSGPAKFTEDCGVSDAGAAAVTLAHPVAGAGRLNARSDDTDSHDGASHQAQAHAHTTNSQTPTELRVPVCRPAGDVRGAICTHPLFPLLGALLGRCDHVAKGSLPAPAATHAFGHVPTDGEIDALLSDFAMSRAAFGHPLFTADADLDAFMAHALQVLRLHLSELARLFALCDEFCERSISNVRSRLLHSHHVTGGAALGQSAAVPGEDSDLDATMATMEHPDTAAIAAHGDGSVSHGGGGERGDGGVSVASATGASVATGARVRAEAGEVGDVRPADESSGRSDEDADGHVRIGEKGLGLSSAGGKRRSLPKGTTRVLRDWLFGHVTSPYPSDEEKRILAVQTGLSIGQLNNWFVNARRRILQPMLDARKLPPHSEAHARRDLQIRAPQQQSPPST* # ORIGINAL: g766.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 1217 3141 . - . ID=g766;Name=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 1217 3141 . - . ID=g766.t1;Parent=g766;Name=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 2650 3141 . - . ID=g766.t1.exon1;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 2650 3141 . - 0 ID=cds.g766.t1;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 1690 2223 . - . ID=g766.t1.exon2;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 1690 2223 . - 0 ID=cds.g766.t1;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 1503 1579 . - . ID=g766.t1.exon3;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 1503 1579 . - 0 ID=cds.g766.t1;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 1217 1349 . - . ID=g766.t1.exon4;Parent=g766.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 1217 1349 . - 1 ID=cds.g766.t1;Parent=g766.t1 #PROT g766.t1 g766 MESLREATSGDGDAFSGPAKFTEDCGVSDAGAAAVTLAHPVAGAGRLNARSDDTDSHDGASHQAQAHAHTTNSQTPTELRVPVCRPAGDVRGAICTHPLFPLLGALLGRCDHVAKGSLPAPAATHAFGHVPTDGEIDALLSDFAMSRAAFGHPLFTADADLDAFMAHALQVLRLHLSELARLFALCDEFCERSISNVRSRLLHSHHVTGGAALGQSAAVPGEDSDLDATMATMEHPDTAAIAAHGDGSVSHGGGGERGDGGVSVASATGASVATGARVRAEAGEVGDVRPADESSGRSDEDADGHVRIGEKGLGLSSAGGKRRSLPKGTTRVLRDWLFGHVTSPYPSDEEKRILAVQTGLSIGQLNNWFVNARRRILQPMLDARKLPPHSEAHARRDLQIRAPQQQSPPST* # ORIGINAL: g767.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 4814 5993 . - . ID=g767;Name=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 4814 5993 . - . ID=g767.t1;Parent=g767;Name=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 5953 5993 . - . ID=g767.t1.exon1;Parent=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 5953 5993 . - 0 ID=cds.g767.t1;Parent=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 5386 5603 . - . ID=g767.t1.exon2;Parent=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 5386 5603 . - 1 ID=cds.g767.t1;Parent=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 4814 5250 . - . ID=g767.t1.exon3;Parent=g767.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 4814 5250 . - 2 ID=cds.g767.t1;Parent=g767.t1 #PROT g767.t1 g767 MNLDLRLGGSYQHIELVENASAVKVAISVAATNESATVRVNGTGKSLVLDAGDKGTIWFNSPIDSATVKALLKRIDDLENKVKIIDGAVACDTPDKDFGFVVYNSVKNLDPSATGLDNPVNFWNISYADRFKSRGLCSPSLSESCYCPLNYLRASSFIVTDVAEDFKGTQTVLYTASAKGFNATTMRMVQPALLSGSFLVYDRQFAAGWSSFDYDGDDYPSENCAKLRFIT* # ORIGINAL: g765.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 576 1047 . + . ID=g765;Name=g765.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 576 1047 . + . ID=g765.t1;Parent=g765;Name=g765.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 576 779 . + . ID=g765.t1.exon1;Parent=g765.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 576 779 . + 0 ID=cds.g765.t1;Parent=g765.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 931 1047 . + . ID=g765.t1.exon2;Parent=g765.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 931 1047 . + 0 ID=cds.g765.t1;Parent=g765.t1 #PROT g765.t1 g765 LSRAVCNLRASGVRGSLGVFGVKYETDNSRLYVVCGRHVTREELSRVFDPFGANSVSMVTDRNTGASRSQDAERAMRESHLSMVAGVPIKVLIALDAPTHNKDRVA* # ORIGINAL: g770.t1 original gene structure, not modified by PASA NODE_763_length_18022_cov_51.1675 AUGUSTUS gene 16976 17582 . - . ID=g770;Name=g770.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS mRNA 16976 17582 . - . ID=g770.t1;Parent=g770;Name=g770.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 17244 17582 . - . ID=g770.t1.exon1;Parent=g770.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 17244 17582 . - 0 ID=cds.g770.t1;Parent=g770.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS exon 16976 17092 . - . ID=g770.t1.exon2;Parent=g770.t1 NODE_763_length_18022_cov_51.1675 AUGUSTUS CDS 16976 17092 . - 0 ID=cds.g770.t1;Parent=g770.t1 #PROT g770.t1 g770 MHGWVPHAAHTHSDINPRAFLHAREPCTIVSSDEVQNVCPSPFTQLSRAVCNLRASGVRGSLGVFGVKYETDNSRLYVVCGRHVTREELSRVFDPFGANSVSMVTDRNTGASRSQDAERAMRESHLSMVAGVPIKVLIALDAPTHNKDRVA* # ORIGINAL: g6963.t1 original gene structure, not modified by PASA NODE_1641_length_10046_cov_39.4779 AUGUSTUS gene 214 309 . + . ID=g6963;Name=g6963.t1 NODE_1641_length_10046_cov_39.4779 AUGUSTUS mRNA 214 309 . + . ID=g6963.t1;Parent=g6963;Name=g6963.t1 NODE_1641_length_10046_cov_39.4779 AUGUSTUS exon 214 309 . + . ID=g6963.t1.exon1;Parent=g6963.t1 NODE_1641_length_10046_cov_39.4779 AUGUSTUS CDS 214 309 . + 0 ID=cds.g6963.t1;Parent=g6963.t1 #PROT g6963.t1 g6963 VNPSLGTPEGVKATVAVACSLTRCALGETLL* # PASA_UPDATE: g6964.t1, single gene model update, valid-1, status:[pasa:asmbl_2223,status:12],[pasa:asmbl_2224,status:12], valid-1 NODE_1641_length_10046_cov_39.4779 . gene 1901 9850 . - . ID=g6964;Name=g6964.t1 NODE_1641_length_10046_cov_39.4779 . mRNA 1901 9850 . - . ID=g6964.t1;Parent=g6964;Name=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 9701 9850 . - . ID=g6964.t1.exon1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 9701 9850 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 8552 9257 . - . ID=g6964.t1.exon2;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 8552 9257 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 8221 8311 . - . ID=g6964.t1.exon3;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 8221 8311 . - 2 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 7883 7992 . - . ID=g6964.t1.exon4;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 7883 7992 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 7556 7646 . - . ID=g6964.t1.exon5;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 7556 7646 . - 2 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 7116 7202 . - . ID=g6964.t1.exon6;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 7116 7202 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 6870 6947 . - . ID=g6964.t1.exon7;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 6870 6947 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 6524 6640 . - . ID=g6964.t1.exon8;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 6524 6640 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 6199 6272 . - . ID=g6964.t1.exon9;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 6199 6272 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 5849 5970 . - . ID=g6964.t1.exon10;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 5849 5970 . - 2 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 5247 5386 . - . ID=g6964.t1.exon11;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 5247 5386 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 4863 5019 . - . ID=g6964.t1.exon12;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 4863 5019 . - 1 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 4458 4577 . - . ID=g6964.t1.exon13;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 4458 4577 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 3956 4174 . - . ID=g6964.t1.exon14;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 3956 4174 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 3597 3707 . - . ID=g6964.t1.exon15;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 3597 3707 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 3077 3215 . - . ID=g6964.t1.exon16;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 3077 3215 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 2686 2792 . - . ID=g6964.t1.exon17;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 2686 2792 . - 2 ID=cds.g6964.t1;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . exon 1901 2383 . - . ID=g6964.t1.exon18;Parent=g6964.t1 NODE_1641_length_10046_cov_39.4779 . CDS 1901 2383 . - 0 ID=cds.g6964.t1;Parent=g6964.t1 #PROT g6964.t1 g6964 MLVATARKDSAGDWTYSNAVNVFNLDTFTWTAVPAKGTAPYPRWSHRLFRFGDEIVTFGGCFAPSLFFNDIHILKNVTIDPTAAEVYGPNVLSTHVGDLSRFYVRGVDVDRKELNFGGDVVSAFAMTPRGYRFACNVRDLQNGTYAVSYITFIAGTYSVFVYFNGEEVRGNPFSLSVVPLNAVPKLTSILAAKGVLRGTPSSFSLFAKDAYANPTNTTSGMSVRISPAGSAGSAGALLPVNFILSDVGSISVVFTPVVDGVHDVHVTIDGDDVFGSPFTITANSPESSSDKTGIIIGAVVGSVVFVSIVIVISLLRRMRSNKELDEWRIDSRDLMGDPDDRTNRSGSLASSADGLADKEERMGGRHVSTRSRTTAFNLELLYWHTNPVSIQRLVFRRPLADSTVARTIRSFRRFRHQNLVTFYGVCCDGNVPLGVITEFCHKGPLSAILYSRNITLGQSFFFSFALDIASGLDYLHRQNIVHTRFSSSTCLVDSRWIVKLCDFGLEQLSAMEPVLVPRSDALQSMRLAASKRHSILDEIKRKLSANAVEPAPDSYSAACVDADLTELLRWLSPEVMRGAPQSQASNVYTFGVIVKEMLERREPWSQYDIYEWQNARIAVADEVIVQSLSSDDRVGNEGLASIIDMCLRRPDRRPSTTDLVALVRRSNPSKSKSVIDRMSEMLERYASNLERLVQDRTQELSIEKQRTDELLLSILPAKIVRQLKDSPDAYIAERHESVTVFFSDIVGFTDMSRQTKPEVVVQMLNDAFSVADMLTQKYAMTKIKTIGDAYMAACGVPEAVPNHAANVAMFALDFMESVNSMADTLGNPLKMRCGVHTGPLVAGVVGTRNFAYDLWGDTVNVASRMESNGEPNKVCMSPSTYNELKDQFDCIAREPKNIKGQGIMTTYLLIGPKPGVCLQLGGIQSTQSAAPETDMTSPQSIHRGTRSSNSSQMSYGYASSALAAALDEDRMSPIMHKSSVVSRGDGVSAVAINPVTSRQHVRGLRQSLFGSNPMLRSMDSEGQRFKRVIVEEE* # ORIGINAL: g576.t1 original gene structure, not modified by PASA NODE_2491_length_6073_cov_46.2734 AUGUSTUS gene 456 2961 . - . ID=g576;Name=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS mRNA 456 2961 . - . ID=g576.t1;Parent=g576;Name=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 2861 2961 . - . ID=g576.t1.exon1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 2861 2961 . - 0 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 2455 2686 . - . ID=g576.t1.exon2;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 2455 2686 . - 1 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 2191 2339 . - . ID=g576.t1.exon3;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 2191 2339 . - 0 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 1705 1783 . - . ID=g576.t1.exon4;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 1705 1783 . - 1 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 1297 1428 . - . ID=g576.t1.exon5;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 1297 1428 . - 0 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 1018 1141 . - . ID=g576.t1.exon6;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 1018 1141 . - 0 ID=cds.g576.t1;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS exon 456 658 . - . ID=g576.t1.exon7;Parent=g576.t1 NODE_2491_length_6073_cov_46.2734 AUGUSTUS CDS 456 658 . - 2 ID=cds.g576.t1;Parent=g576.t1 #PROT g576.t1 g576 MQLLSLLERVLYEVSVPYFAADTARMVQCCVVAILAHEHTCDDRELSHWLAILAGLCRNSPDVRAHVKGYDNVKSLYRRLIVLLSHDELAAIVASLAILISLVFGEPLGDKLFHRKNIDQTFRLVFNLVCNADTFGTMRRAADLLDDLTSRSSAVTLALASFDALRDSVDDLLALVAEAREAAVTRLGCAATVSAGVVSNNSLSSLLTIACDAVNSGASAHAIDVLRVVLEDAHVAQALQGCEQQVRSIAHAAMRSLVSDNGVEVAALRAIAELSTISTVASLAKTSLSADALIAAVCSLCGEGNGRIDTLLRSTIVSKFAHMCALAVTLAGPERTLAVV # PASA_UPDATE: g577.t1, single gene model update, valid-1, status:[pasa:asmbl_4424,status:12],[pasa:asmbl_4425,status:12], valid-1 NODE_2491_length_6073_cov_46.2734 . gene 4470 5634 . - . ID=g577;Name=g577.t1 NODE_2491_length_6073_cov_46.2734 . mRNA 4470 5634 . - . ID=g577.t1;Parent=g577;Name=g577.t1 NODE_2491_length_6073_cov_46.2734 . five_prime_UTR 5552 5634 . - . ID=g577.t1.utr5p1;Parent=g577.t1 NODE_2491_length_6073_cov_46.2734 . exon 5225 5634 . - . ID=g577.t1.exon1;Parent=g577.t1 NODE_2491_length_6073_cov_46.2734 . CDS 5225 5551 . - 0 ID=cds.g577.t1;Parent=g577.t1 NODE_2491_length_6073_cov_46.2734 . exon 4470 5026 . - . ID=g577.t1.exon2;Parent=g577.t1 NODE_2491_length_6073_cov_46.2734 . CDS 4592 5026 . - 0 ID=cds.g577.t1;Parent=g577.t1 NODE_2491_length_6073_cov_46.2734 . three_prime_UTR 4470 4591 . - . ID=g577.t1.utr3p1;Parent=g577.t1 #PROT g577.t1 g577 MAAQRLGGNGMRLLLGVIVLSSCVASSFAATVGVTVGPGFSLSFSPSSVTINVGDTVQWTWASGTHNVIQVPNSGSCSPSSGGFASSTQSSGTFSHTFNQAGTFVYVCTLHCGSMEAQITVNAAPAAPTTTAAAAASSTVGAAVSSTVGAAASSTVGAAASSTVGAAASSTVGAAASSTVGAVVSQSSVTAIAASSTAGAVTSTRTAAAASSTAAAHTTALVDDDGGSGSFCRPQSYAVMLTAAFVLAAWMAA* # ORIGINAL: g1144.t1 original gene structure, not modified by PASA NODE_3598_length_3135_cov_27.8781 AUGUSTUS gene 569 2652 . - . ID=g1144;Name=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS mRNA 569 2652 . - . ID=g1144.t1;Parent=g1144;Name=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 2597 2652 . - . ID=g1144.t1.exon1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 2597 2652 . - 0 ID=cds.g1144.t1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 2352 2439 . - . ID=g1144.t1.exon2;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 2352 2439 . - 1 ID=cds.g1144.t1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 2009 2115 . - . ID=g1144.t1.exon3;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 2009 2115 . - 0 ID=cds.g1144.t1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 1396 1552 . - . ID=g1144.t1.exon4;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 1396 1552 . - 1 ID=cds.g1144.t1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 933 1034 . - . ID=g1144.t1.exon5;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 933 1034 . - 0 ID=cds.g1144.t1;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS exon 569 688 . - . ID=g1144.t1.exon6;Parent=g1144.t1 NODE_3598_length_3135_cov_27.8781 AUGUSTUS CDS 569 688 . - 0 ID=cds.g1144.t1;Parent=g1144.t1 #PROT g1144.t1 g1144 METESAVVQKVSGITPQLQNVVATVNLGCKLDLKTIVKHARNAEYNPRRFAAVIIRIRNPRTTALVFASGKMVCTGAKSEEESRLAARKHAAMIKKLDHPQAKFTEFKIQNIVGSCDVKFPIRLEGLVHDHSLYASYEPELFPGLIYRMKVPKVVLLIFVSGKIVLTGAKDKQDIYTAFENIYPVLTEFSKEKLKPLPDPNKDKGNRLQ* # ORIGINAL: g5436.t1 original gene structure, not modified by PASA NODE_3116_length_4264_cov_42.7598 AUGUSTUS gene 2105 4244 . + . ID=g5436;Name=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS mRNA 2105 4244 . + . ID=g5436.t1;Parent=g5436;Name=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 2105 2242 . + . ID=g5436.t1.exon1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 2105 2242 . + 0 ID=cds.g5436.t1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 2536 2848 . + . ID=g5436.t1.exon2;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 2536 2848 . + 0 ID=cds.g5436.t1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 3145 3216 . + . ID=g5436.t1.exon3;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 3145 3216 . + 2 ID=cds.g5436.t1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 3325 3452 . + . ID=g5436.t1.exon4;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 3325 3452 . + 2 ID=cds.g5436.t1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 3739 3877 . + . ID=g5436.t1.exon5;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 3739 3877 . + 0 ID=cds.g5436.t1;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 4087 4244 . + . ID=g5436.t1.exon6;Parent=g5436.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 4087 4244 . + 2 ID=cds.g5436.t1;Parent=g5436.t1 #PROT g5436.t1 g5436 METPSGADAGLPGQMHYDDGVALPDSIEKAKELAQKQRDKLNEYKNLLKEAQAGPGGHSIGTSTSTSTSPMLPPGTLSNALEGDYNTPEQSRPRAYSATSTGTDAAEGDRELRPAPFVRSSSLLQSSFNSSLNGSHNVAHFVGSAWHGEGVLEEADAGGLSSAGTQTDPNDLVVAGVADTYDDDWYKGSVPSLHGSFMASTSVLIDAARFGQKDKLKVLSEVIDVNAKDAQGRSALMHACVAGHVHVVKFLLEKNADLNYALGDGSTAIHYAASAGNPDILTFLIAQVRILSSSSALSLSLSLVESMGTAPMTLT* # ORIGINAL: g5435.t1 original gene structure, not modified by PASA NODE_3116_length_4264_cov_42.7598 AUGUSTUS gene 753 1685 . + . ID=g5435;Name=g5435.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS mRNA 753 1685 . + . ID=g5435.t1;Parent=g5435;Name=g5435.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS exon 753 1685 . + . ID=g5435.t1.exon1;Parent=g5435.t1 NODE_3116_length_4264_cov_42.7598 AUGUSTUS CDS 753 1685 . + 0 ID=cds.g5435.t1;Parent=g5435.t1 #PROT g5435.t1 g5435 MPQPPGCDDAIYSLMMWCWQHNDKERPKFADVLSAVRSIIDSDEGIGTAPITEDCVDASGDGGTATALGSCAPVSLFSSTTTDVPSASTPTAIDRFGRGGKALASFRLFHGKRKAMDSQTSLRTSNDTGAYGDIRLSDMELQSIAVHENATKTTAESIGNAADAANASGVRAVTCASAPISPVGGRSSDEASAAAAGHPAKMVRKSSAPSLNAILAPRCPSIGNEAVPMVTFRESRTSRLGKSAVSGGGGETSAANSANSATAIPECDASRHSVLTSVLDQGTTTSTNDLIELDARAAAEGHSAAYMDVS* # ORIGINAL: g2937.t1 original gene structure, not modified by PASA NODE_13046_length_263_cov_143.5_potentialcontaminant AUGUSTUS gene 2 263 . + . ID=g2937;Name=g2937.t1 NODE_13046_length_263_cov_143.5_potentialcontaminant AUGUSTUS mRNA 2 263 . + . ID=g2937.t1;Parent=g2937;Name=g2937.t1 NODE_13046_length_263_cov_143.5_potentialcontaminant AUGUSTUS exon 2 263 . + . ID=g2937.t1.exon1;Parent=g2937.t1 NODE_13046_length_263_cov_143.5_potentialcontaminant AUGUSTUS CDS 2 263 . + 2 ID=cds.g2937.t1;Parent=g2937.t1 #PROT g2937.t1 g2937 IMARIQAVVSNLLAVSKGLTGGEVDNPVLVRVALWAEYGVVAHALEVRDAAERPSFAAQFDRVGAKTTELCLEWLEEMTATLAPTV # ORIGINAL: g10260.t1 original gene structure, not modified by PASA NODE_2450_length_6213_cov_39.6307 AUGUSTUS gene 5181 5951 . + . ID=g10260;Name=g10260.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS mRNA 5181 5951 . + . ID=g10260.t1;Parent=g10260;Name=g10260.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 5181 5951 . + . ID=g10260.t1.exon1;Parent=g10260.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 5181 5951 . + 0 ID=cds.g10260.t1;Parent=g10260.t1 #PROT g10260.t1 g10260 MMEGTTEEPLQSPGEATLPLLPPGRLMQLVADSGAPIDDARPRISLAPPLSPRVHWWWRRDFTDGCARPGDAAAREAGVSPSSAPSPPTHASHTHWTPFSRIDSEALELAWSAVSVNVSQKAPSAPTGTSTLQATTVLGGRYDVDVTQRTLRAAYWSEAPARVLRGTWYSRSDDDEWVPYEESVAEAIEGAYCAACEGGTWPAQVPLGPGGEAVVLHSAAIAMHHPPGAGIAEEDSGRPHVVARGFDTSEVDAGMC* # ORIGINAL: g10259.t1 original gene structure, not modified by PASA NODE_2450_length_6213_cov_39.6307 AUGUSTUS gene 2465 4661 . + . ID=g10259;Name=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS mRNA 2465 4661 . + . ID=g10259.t1;Parent=g10259;Name=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 2465 2467 . + . ID=g10259.t1.exon1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 2465 2467 . + 0 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 2553 2679 . + . ID=g10259.t1.exon2;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 2553 2679 . + 0 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 2847 2961 . + . ID=g10259.t1.exon3;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 2847 2961 . + 2 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 3266 3370 . + . ID=g10259.t1.exon4;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 3266 3370 . + 1 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 3590 3700 . + . ID=g10259.t1.exon5;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 3590 3700 . + 1 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 3832 3993 . + . ID=g10259.t1.exon6;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 3832 3993 . + 1 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 4101 4163 . + . ID=g10259.t1.exon7;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 4101 4163 . + 1 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 4248 4395 . + . ID=g10259.t1.exon8;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 4248 4395 . + 1 ID=cds.g10259.t1;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS exon 4578 4661 . + . ID=g10259.t1.exon9;Parent=g10259.t1 NODE_2450_length_6213_cov_39.6307 AUGUSTUS CDS 4578 4661 . + 0 ID=cds.g10259.t1;Parent=g10259.t1 #PROT g10259.t1 g10259 MADDSASDEEYVLYRNRPEWSDVAPVPQDDGPSPVVAIAYTEEFRDSMDYFRAVLKSNERTLRALELTADVIRGNAANYTAWHYRRLLLEALNSDLREELAYCGDLALSNPKNYQIWYHRRVIVERLGDPSEELDFTAAALAKDSKNYHAWTHRQWVNRTFALWDGERTFVDRLLREDIRNNSAWNHRHFVVTHTTGWTGETVVAETEYALAIIRRAPNNESPWSYIRGLLRDRRMLDFPALVDACEELYSKSVRSPHLLGALVDIRIEQGRHADAKAFCDALGNDIDTIRKKYWEFRASRIPAA* # PASA_UPDATE: g10258.t1, single gene model update, valid-1, status:[pasa:asmbl_4341,status:12],[pasa:asmbl_4342,status:12], valid-1 NODE_2450_length_6213_cov_39.6307 . gene 95 2117 . - . ID=g10258;Name=g10258.t1 NODE_2450_length_6213_cov_39.6307 . mRNA 95 2117 . - . ID=g10258.t1;Parent=g10258;Name=g10258.t1 NODE_2450_length_6213_cov_39.6307 . five_prime_UTR 1897 2117 . - . ID=g10258.t1.utr5p1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 1698 2117 . - . ID=g10258.t1.exon1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 1698 1896 . - 0 ID=cds.g10258.t1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 1348 1550 . - . ID=g10258.t1.exon2;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 1348 1550 . - 2 ID=cds.g10258.t1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 1023 1154 . - . ID=g10258.t1.exon3;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 1023 1154 . - 0 ID=cds.g10258.t1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 669 769 . - . ID=g10258.t1.exon4;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 669 769 . - 0 ID=cds.g10258.t1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 398 561 . - . ID=g10258.t1.exon5;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 398 561 . - 1 ID=cds.g10258.t1;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . exon 95 257 . - . ID=g10258.t1.exon6;Parent=g10258.t1 NODE_2450_length_6213_cov_39.6307 . CDS 95 257 . - 2 ID=cds.g10258.t1;Parent=g10258.t1;3_prime_partial=true #PROT g10258.t1 g10258 MDCLLRDHERVAKRQRVAVSRTIEGLDKLVNELKQCRQRLDALDATAPATATTATTATTATTAPDSGEAVPMELCGNASASATEGTAGGVGGPGARGAIIEAASHATRELVAKIPVEHRDLYGHISKFGKAIDKSFPSDLERIVSPDAFHDAKGVLNDVVAKHLLRQGHFAIAESFIKEAGLDLETTKMGPFVEMYTIMEAIRRADLQPALAWAAAHRAELEARDSVLEFKLHRLQFLRYLSLGDRDAAITYARQYFGAFAVSHMKDIQRLMGCVLFHKRLDKSPYADLHDPMHWTDIAAAFTRDCCSLLGLSYESPVFV # ORIGINAL: g12856.t1 original gene structure, not modified by PASA NODE_1399_length_11598_cov_41.1991 AUGUSTUS gene 129 2161 . - . ID=g12856;Name=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS mRNA 129 2161 . - . ID=g12856.t1;Parent=g12856;Name=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 1997 2161 . - . ID=g12856.t1.exon1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 1997 2161 . - 0 ID=cds.g12856.t1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 1592 1870 . - . ID=g12856.t1.exon2;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 1592 1870 . - 0 ID=cds.g12856.t1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 1384 1500 . - . ID=g12856.t1.exon3;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 1384 1500 . - 0 ID=cds.g12856.t1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 987 1179 . - . ID=g12856.t1.exon4;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 987 1179 . - 0 ID=cds.g12856.t1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 596 786 . - . ID=g12856.t1.exon5;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 596 786 . - 2 ID=cds.g12856.t1;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 129 320 . - . ID=g12856.t1.exon6;Parent=g12856.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 129 320 . - 0 ID=cds.g12856.t1;Parent=g12856.t1 #PROT g12856.t1 g12856 MADEATLEVAVRAKRAAVRLQIASADQKNAALAAIKTSLCDARESVCRANRQDKEDAERAVSAGDLSSSLFKRLDIENPDKFQALLDGLDDVAKLDDPTGKVTLARRLDDGLDLYRVTCPVGVVCIIFEARPEVVIQISSLAIKSGNAGGREAAHSNEALVSVVRAGLAAVPGFPEDAVQLVSTREQVSSLLSLDRYIDLVIPRGGNALVRYVQSHTRIPVLGHADGICSVFIDATADVKKAVRVSVDSKAETLLVHRDVLSSTFQVVASALVEAGVRLRCDERAFSALSPHDAITRASDADFHTEFLDLIMAVKVVDSLDDAIAHINAHGSRHTESIVTESDANAERFMALVDAAGVYHNASTRFADGYRYGFGAEIG # PASA_UPDATE: g12857.t1, single gene model update, valid-1, status:[pasa:asmbl_1457,status:12],[pasa:asmbl_1459,status:12], valid-1 NODE_1399_length_11598_cov_41.1991 . gene 2595 10283 . + . ID=g12857;Name=g12857.t1 NODE_1399_length_11598_cov_41.1991 . mRNA 2595 10283 . + . ID=g12857.t1;Parent=g12857;Name=g12857.t1 NODE_1399_length_11598_cov_41.1991 . five_prime_UTR 2595 2791 . + . ID=g12857.t1.utr5p1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 2595 2870 . + . ID=g12857.t1.exon1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 2792 2870 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 3041 3144 . + . ID=g12857.t1.exon2;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 3041 3144 . + 2 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 3329 3409 . + . ID=g12857.t1.exon3;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 3329 3409 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 3576 3761 . + . ID=g12857.t1.exon4;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 3576 3761 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 4121 4217 . + . ID=g12857.t1.exon5;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 4121 4217 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 4477 4600 . + . ID=g12857.t1.exon6;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 4477 4600 . + 2 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 4708 5054 . + . ID=g12857.t1.exon7;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 4708 5054 . + 1 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 5308 5413 . + . ID=g12857.t1.exon8;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 5308 5413 . + 2 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 5604 5753 . + . ID=g12857.t1.exon9;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 5604 5753 . + 1 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 5885 5948 . + . ID=g12857.t1.exon10;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 5885 5948 . + 1 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 6160 6316 . + . ID=g12857.t1.exon11;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 6160 6316 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 6433 6519 . + . ID=g12857.t1.exon12;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 6433 6519 . + 2 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 6743 8229 . + . ID=g12857.t1.exon13;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 6743 8229 . + 2 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 8418 8533 . + . ID=g12857.t1.exon14;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 8418 8533 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 8824 9466 . + . ID=g12857.t1.exon15;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 8824 9466 . + 1 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . exon 9676 10283 . + . ID=g12857.t1.exon16;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . CDS 9676 10050 . + 0 ID=cds.g12857.t1;Parent=g12857.t1 NODE_1399_length_11598_cov_41.1991 . three_prime_UTR 10051 10283 . + . ID=g12857.t1.utr3p1;Parent=g12857.t1 #PROT g12857.t1 g12857 MAAPATDTRKLSTLAATAAGLTTGDADVGRVRVFARIRPFKQAEKDRKESTAITLEPDHQHMTVLEIGRPEKKYDFDAVFDETQSNEDVYRAVGRPIVNAALSGFNGTLMAYGQTGTGKTHTLASSDGIIPRVVNNLFRKVAKDKAHVYRISCSYLQIYQEKIHDLLTPSAKNLALREHPEKGVYVENLSEFVVRSPKEVFELLMAGRKQLVFAETKMNRHSSRSHAICLVTVERALNKDAQSSSEPRDDARPQRPKQQQQQQQQQQQQQRRSDAMDAADGASRTESVITGDGNGTGEATPRDPDGASLLGDNTSLVNYDAAMDDGTTSLMEVTGALEPSGDVEWERDEEDEMDAVGKLVEGVEKDAVLRGRITLCDLAGSERVRKTEAAGDRLSEAQHINLSLLELGNVIHALTDAKMTHVPFRNSTLTRLLQESLGGNCKTSLVVCVSPSPKDASETKSTLNFGARAKKVKNSAHVNIEVDYKILANDLAMQMEAKESEWRLREASLLREIESLKSQLSFAEEELARRLAELDASRAADLGAKEASLLAEISAERARAASEAQRARRAEDRLARWLECTSHVMARDNAAVLKAELISLNMYRAFVKEHWDALRDSCVVQSTRTAGKHPGDNNVSDDADADAMADGETVGDDSSGEGGVEEQLPLAAVVDSALADAVGAIALSLEAQVEDLRSRDYPSTDASHLASRLASGCAPVSQSVQMADDDDGVDVSKMLDAFANGKSLHDVASTAIAEKAVRSKAGVESGDGVSRKADVEAEAMVSAVAGNWASRGAGAQDGQPRAAFDYRQLQGRLDAARSVVMESARIFLAGKLAARDDSYDNGGEADAAESGSMGEGDAAPDAPADGLSAAPDVAVESRDRGTSGRRSAGQFGVSLRDDRLWGLRERVADMLDTVSRRNGPPSHYHPVSGLPYALITGLTEVSASGAIGMPPHSSGSTAALVVNVPYGDGGGNPVIEGPTAAALVRSLQVRALTHVLVDKSLIAALVVLFGAELAASGAKKSVWDRETRGAIQFGIGLFNLINSILPAKILKLISVLGFPSSRERALQELTLCHEGGGVRAPIASLILLAYHVVLQSFFSYDSASHAEKAERILADSFKRFPGGGLFLLMSGRLQRVKRNIPASVVEFEKAAASQPAWKQFQHLCCYELGWCHFFGMAFDRALPYFARLVAENEWSKGFYTYMMAMCQWELGDKDAAVELLNRLPELIKRKWGGKTISVEQFVLRKVKTYVLDRDAADCGLFLPAHEIIYLWNGFTQMSPDLLQKCLGEVDAYSAANPDDANDPSREAVVRLMRGSLLKEMGDFEGARACFAWIEENRKRIAEENYTIPHARYEQTVICLHEGKQAEAAEWLDKAQGYSEDYNFEVRLRMRMHLTSDHVTP* # ORIGINAL: g12858.t1 original gene structure, not modified by PASA NODE_1399_length_11598_cov_41.1991 AUGUSTUS gene 11035 11499 . - . ID=g12858;Name=g12858.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS mRNA 11035 11499 . - . ID=g12858.t1;Parent=g12858;Name=g12858.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS exon 11035 11499 . - . ID=g12858.t1.exon1;Parent=g12858.t1 NODE_1399_length_11598_cov_41.1991 AUGUSTUS CDS 11035 11499 . - 0 ID=cds.g12858.t1;Parent=g12858.t1 #PROT g12858.t1 g12858 MRPYRRGEPLTYLDKLCESLAARIYASEDEQRAFIDRVRGLFSKGYLPVGSSSQSGGAPGVTFSGSAHRGHADAHQQHTHHNQHQHPHHHHPVHPHLHTHTHNHPQGHEGHDAAESHEGSQVDLESMSEGVGVASAVKDEGVAGVKLEEADSLQ* # ORIGINAL: g10982.t1 original gene structure, not modified by PASA NODE_1571_length_10428_cov_39.2859 AUGUSTUS gene 110 2913 . + . ID=g10982;Name=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS mRNA 110 2913 . + . ID=g10982.t1;Parent=g10982;Name=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 110 538 . + . ID=g10982.t1.exon1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 110 538 . + 0 ID=cds.g10982.t1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 913 1199 . + . ID=g10982.t1.exon2;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 913 1199 . + 0 ID=cds.g10982.t1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 1489 1555 . + . ID=g10982.t1.exon3;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 1489 1555 . + 1 ID=cds.g10982.t1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 1769 1908 . + . ID=g10982.t1.exon4;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 1769 1908 . + 0 ID=cds.g10982.t1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 2407 2579 . + . ID=g10982.t1.exon5;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 2407 2579 . + 1 ID=cds.g10982.t1;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS exon 2735 2913 . + . ID=g10982.t1.exon6;Parent=g10982.t1 NODE_1571_length_10428_cov_39.2859 AUGUSTUS CDS 2735 2913 . + 2 ID=cds.g10982.t1;Parent=g10982.t1 #PROT g10982.t1 g10982 MEHGGGVTGSFKDTPLHSWIVSRNSRTQNERTQALDNFLYSCAGYCVATYVLGICDRHNDNIMVTPRGHLFHIDFGRFLGNAQMLGVIKRDRAPFVFTPEFALVINDGVSGDTDRLRWFVQLCSRAYNVIRRRGHLLVTLLEMMVSAGMPELRGSRDIDYVRTALRPDLSEAGAASFFAKLVDLSRSTRFVQLNFFIHNVAQVNIPQKIGAAFSRQGGRSPSGSGSAPDGQRRSGADRCDLKPIRHISFVDCGKRDSDRRYIYTMLVTHTDSTTALVRRTFDDFRELHKSLPPDSRSPSFPTLAVLGRSDVRRVAVRRMKDLEGYVKDLLASDCAQVDDVLAFFHEDSSADRVADGELGLITTTKVTKATALYDYTPTRADEVPLFVGAVVTDLREEEGGWMFGNSGGRWGYFPADYVQIASSQ* # PASA_UPDATE: g10983.t1, single gene model update, valid-1, status:[pasa:asmbl_2009,status:12], valid-1 NODE_1571_length_10428_cov_39.2859 . gene 3273 6252 . - . ID=g10983;Name=g10983.t1 NODE_1571_length_10428_cov_39.2859 . mRNA 3273 6252 . - . ID=g10983.t1;Parent=g10983;Name=g10983.t1 NODE_1571_length_10428_cov_39.2859 . exon 4599 6252 . - . ID=g10983.t1.exon1;Parent=g10983.t1 NODE_1571_length_10428_cov_39.2859 . CDS 4599 6252 . - 0 ID=cds.g10983.t1;Parent=g10983.t1 NODE_1571_length_10428_cov_39.2859 . exon 3273 4242 . - . ID=g10983.t1.exon2;Parent=g10983.t1 NODE_1571_length_10428_cov_39.2859 . CDS 3917 4242 . - 2 ID=cds.g10983.t1;Parent=g10983.t1 NODE_1571_length_10428_cov_39.2859 . three_prime_UTR 3273 3916 . - . ID=g10983.t1.utr3p1;Parent=g10983.t1 #PROT g10983.t1 g10983 MITAPTIVDRLNSLVPQTTDFTSAQVSSGAIESGKLGLPTKTLSTGPFESGDDGSDGSCISTGVPNGNSDTPSPQASSFNGSAVTLQPLGAALGTADISSTEGTRMIPAKVSPVPEKMGGELATNGGEETHSATGRSNDDAASRSGDEAAPAQWNATSCLDTTSCQALLRELTEYVESRDDDQGLSGLSAPTGGRTVRTTDRPGAPGAGGDVRGVVRRPMNAFMIFSTRFRKALREKFPNEDNKTVSKMLGDLWATMPRELKLQYQSAAARIQAEHKAANPGWNYNQNSRKAATAASAAAKEQAAAAAAAAGALSKDMSGGASAGVGSGAGNHYSHPHPHAHAQQAGLGMSGYPPQLHQVVPTHMHPNDWRGSHMYAAMQPDGQSGGDYASTLVGGPAGYAHMHSYGPGMGMPMDGPGVGANHRGHMGMPSRMPGSMAHEGGPMRGRPGMQGRPSPYPVHQHPGYGSGIREAYSRGGAESGLYYGQEPVMPLHSGGRVPYGRQAYSQGTNGLGDANDSHSSRSTAMASSGAGGGADSDGDQHSAHGAYAIAAPPISTTTHRVPVVQLPREDSPAHDGNGHYINRVELQQPQHRDGGAGMSSYYAQQQSQGQQQQTAYNEPFIGGGGIGSGRALNASQTDQGSAGGQYGFPGSQQWAQQN* # PASA_UPDATE: g5581.t1, single gene model update, valid-1, status:[pasa:asmbl_2126,status:3], valid-1 NODE_1607_length_10217_cov_39.75 . gene 1068 3135 . + . ID=g5581;Name=g5581.t1 NODE_1607_length_10217_cov_39.75 . mRNA 1068 3135 . + . ID=g5581.t1;Parent=g5581;Name=g5581.t1 NODE_1607_length_10217_cov_39.75 . five_prime_UTR 1068 1219 . + . ID=g5581.t1.utr5p1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . five_prime_UTR 1331 1359 . + . ID=g5581.t1.utr5p2;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 1068 1219 . + . ID=g5581.t1.exon1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 1331 1420 . + . ID=g5581.t1.exon2;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . CDS 1360 1420 . + 0 ID=cds.g5581.t1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 1550 1798 . + . ID=g5581.t1.exon3;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . CDS 1550 1798 . + 2 ID=cds.g5581.t1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 1900 2010 . + . ID=g5581.t1.exon4;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . CDS 1900 2010 . + 2 ID=cds.g5581.t1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 2156 2383 . + . ID=g5581.t1.exon5;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . CDS 2156 2383 . + 2 ID=cds.g5581.t1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . exon 2559 3135 . + . ID=g5581.t1.exon6;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . CDS 2559 2686 . + 2 ID=cds.g5581.t1;Parent=g5581.t1 NODE_1607_length_10217_cov_39.75 . three_prime_UTR 2687 3135 . + . ID=g5581.t1.utr3p1;Parent=g5581.t1 #PROT g5581.t1 g5581 MASAADMGKLKAYVQVTKDSGPGPACYGLPSTIGSPGKQSVDVSMQYSPSYTFGMRLDMGGAVGQKTVSPGPAAVLPLVDRNGNKGGQPAYSIQTRKISFVTKNATFVPGPGAYYPEKSLVPKERHAPAYSFGARLNDQKMSDGPSPNTFNLPTLMGPKTCTSRIRSAPAFSMGSRHKPLISLTTPAPGAYRDVDPNTFKQKAPTISLSPRYKAERDFNAVPGPGAYNPDFASTFSKAPRSSLGIRHSEYMINFVEEI* # ORIGINAL: g5583.t1 original gene structure, not modified by PASA NODE_1607_length_10217_cov_39.75 AUGUSTUS gene 6153 9326 . + . ID=g5583;Name=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS mRNA 6153 9326 . + . ID=g5583.t1;Parent=g5583;Name=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 6153 6258 . + . ID=g5583.t1.exon1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 6153 6258 . + 0 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 6485 6643 . + . ID=g5583.t1.exon2;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 6485 6643 . + 2 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 6785 6904 . + . ID=g5583.t1.exon3;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 6785 6904 . + 2 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 7027 7217 . + . ID=g5583.t1.exon4;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 7027 7217 . + 2 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 7459 7542 . + . ID=g5583.t1.exon5;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 7459 7542 . + 0 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 7752 7883 . + . ID=g5583.t1.exon6;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 7752 7883 . + 0 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 8167 8227 . + . ID=g5583.t1.exon7;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 8167 8227 . + 0 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 8647 8711 . + . ID=g5583.t1.exon8;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 8647 8711 . + 2 ID=cds.g5583.t1;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 9027 9326 . + . ID=g5583.t1.exon9;Parent=g5583.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 9027 9326 . + 0 ID=cds.g5583.t1;Parent=g5583.t1 #PROT g5583.t1 g5583 MASGGGNAFLRKLRNFDAYPKTLEDFRVKTYTGAAVSIVSSLLMLALFVSELNFYLTPESTQEILVDTSRSEKLRINIDITFPRMPCAFLSIDVMDVSGEQQLDVFHTIYKKRLSALGTPLTDAELHPELGDKSEKIVEKIKNSTEALPDDYCGSCYGAEGPTLRCCNTCEQVREAYRLKGWAFVDPETIEQCVRDGWVDKMKTASSEGCAVYGYFEVSKVAGNFHFAPGKSFQQHHVHVHDLQAFKTNAFNLTHHIDKLSFGKDYPGIVHPLDGVKKVSDSPEGSSMYQYFLKIVPTIYRHVGDESLFHPFMETMINTNQFSATQHHRVINHAAGEHGLPGVFFMYDLSPMLVKITYRRRSFLHFLTSVCAIVGGIFTTAGLVDSFIYHGMKSIKKKMDMGKLT* # ORIGINAL: g5580.t1 original gene structure, not modified by PASA NODE_1607_length_10217_cov_39.75 AUGUSTUS gene 69 154 . + . ID=g5580;Name=g5580.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS mRNA 69 154 . + . ID=g5580.t1;Parent=g5580;Name=g5580.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 69 154 . + . ID=g5580.t1.exon1;Parent=g5580.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 69 154 . + 2 ID=cds.g5580.t1;Parent=g5580.t1 #PROT g5580.t1 g5580 SSSATCGAIPWLPKALRTARSSRRRRCG # ORIGINAL: g5582.t1 original gene structure, not modified by PASA NODE_1607_length_10217_cov_39.75 AUGUSTUS gene 3245 5341 . - . ID=g5582;Name=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS mRNA 3245 5341 . - . ID=g5582.t1;Parent=g5582;Name=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 5336 5341 . - . ID=g5582.t1.exon1;Parent=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 5336 5341 . - 0 ID=cds.g5582.t1;Parent=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 4483 4911 . - . ID=g5582.t1.exon2;Parent=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 4483 4911 . - 0 ID=cds.g5582.t1;Parent=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 3245 4249 . - . ID=g5582.t1.exon3;Parent=g5582.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 3245 4249 . - 0 ID=cds.g5582.t1;Parent=g5582.t1 #PROT g5582.t1 g5582 MEVQAAAAASNQSPKEFCDRVSLSFKSLFDTANISYTHFIRTTDEAHIRAATAMWRRLVDAGDIYMGKHEGWYSVTDEAFVPAAQVTDGTDASGNAVKISKETGGKLEWVTENNYKFRLTKYADRLLDWINSTPSPVQPSNRIEEVRAFVASGLGGGDLSVSRTRDRLEWGIPVPDDPDHTMYVWLDALTNYLTVAGFPESPSPAAWPADYHVVGKDILRFHAVYWPAFLMAAGLEPPRTVLAHGHFTRDRQKMSKSVGNIVDPMQKIEEYGVDVFRYILLRESSIATDGDYSDDRARAVLNGELADSIGNLLARCTSSSLSPTCAWPEAGAADCAGNDAELALLRSLGDVYRFVPLKFDAFDFSGGLGVIAGMLRDANRYLTQEAPWKLMNKGVNADAASKLRVESVLHNCLEALRVGAIYMQPVMPTQSARILDHLGVPAEQRTPDCAVYTAKTHLWSFGLPENKPKFTKVGAPKAR* # ORIGINAL: g5584.t1 original gene structure, not modified by PASA NODE_1607_length_10217_cov_39.75 AUGUSTUS gene 9876 10217 . - . ID=g5584;Name=g5584.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS mRNA 9876 10217 . - . ID=g5584.t1;Parent=g5584;Name=g5584.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS exon 9876 10217 . - . ID=g5584.t1.exon1;Parent=g5584.t1 NODE_1607_length_10217_cov_39.75 AUGUSTUS CDS 9876 10217 . - 0 ID=cds.g5584.t1;Parent=g5584.t1 #PROT g5584.t1 g5584 PPPSIAHALLHHNQASANSNGIVLNFTVTERIANITGLSLLSRVLVSYNPLKPSSNVAHITGTSDELALFGVAYAKSGIVDPTTTRFDGPLESQVTLHYTSLACDNGGCAAQA* # ORIGINAL: g5157.t1 original gene structure, not modified by PASA NODE_3647_length_3039_cov_42.3067 AUGUSTUS gene 541 1935 . - . ID=g5157;Name=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS mRNA 541 1935 . - . ID=g5157.t1;Parent=g5157;Name=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS exon 1932 1935 . - . ID=g5157.t1.exon1;Parent=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS CDS 1932 1935 . - 0 ID=cds.g5157.t1;Parent=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS exon 1059 1741 . - . ID=g5157.t1.exon2;Parent=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS CDS 1059 1741 . - 2 ID=cds.g5157.t1;Parent=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS exon 541 675 . - . ID=g5157.t1.exon3;Parent=g5157.t1 NODE_3647_length_3039_cov_42.3067 AUGUSTUS CDS 541 675 . - 0 ID=cds.g5157.t1;Parent=g5157.t1 #PROT g5157.t1 g5157 MRSPAPSAGGASAGDWPQRAGQLSPQHASAKRNVLDKSAIAAVSLTRPNSLGFGKVSDSLKHAEMVDDASALECSGCGAFGGRHDEYCAHAGSLGEEDHFRHVPSAPLVVRSCGALYDGSRFRGQQKSGRSSYEVEVELKHVDMPSSFLCGYLHIRGLTEDYELLTTFFEAEIIGERHSFLTRKWEADEAVDRQHWGKFSAFASVEKRFNEDGFAYDSRNSDYVFMRWKEHFLVPDHKIKQIAGASFAGFYYICFQRSTSSICGFYFHHNSEW* # PASA_UPDATE: g1381.t1, single gene model update, valid-1, status:[pasa:asmbl_2276,status:3], valid-1 NODE_1665_length_9912_cov_37.7767 . gene 2942 7023 . + . ID=g1381;Name=g1381.t1 NODE_1665_length_9912_cov_37.7767 . mRNA 2942 7023 . + . ID=g1381.t1;Parent=g1381;Name=g1381.t1 NODE_1665_length_9912_cov_37.7767 . five_prime_UTR 2942 3143 . + . ID=g1381.t1.utr5p1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . five_prime_UTR 3322 3341 . + . ID=g1381.t1.utr5p2;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 2942 3143 . + . ID=g1381.t1.exon1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 3322 3418 . + . ID=g1381.t1.exon2;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 3342 3418 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 3669 3747 . + . ID=g1381.t1.exon3;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 3669 3747 . + 1 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 4180 4241 . + . ID=g1381.t1.exon4;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 4180 4241 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 4396 4528 . + . ID=g1381.t1.exon5;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 4396 4528 . + 1 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 4788 4856 . + . ID=g1381.t1.exon6;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 4788 4856 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 5186 5237 . + . ID=g1381.t1.exon7;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 5186 5237 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 5462 5615 . + . ID=g1381.t1.exon8;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 5462 5615 . + 2 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 5799 5997 . + . ID=g1381.t1.exon9;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 5799 5997 . + 1 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 6328 6429 . + . ID=g1381.t1.exon10;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 6328 6429 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . exon 6733 7023 . + . ID=g1381.t1.exon11;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . CDS 6733 6789 . + 0 ID=cds.g1381.t1;Parent=g1381.t1 NODE_1665_length_9912_cov_37.7767 . three_prime_UTR 6790 7023 . + . ID=g1381.t1.utr3p1;Parent=g1381.t1 #PROT g1381.t1 g1381 MAVSGTSAEGEALFLELYTIGPKLGEGAFAVVKKCISNTTGLVRAVKIINKKILTDQSQLEHEVHFLSQFKHKHIVELFETYNSPDRMLLVMEFVSGGEMFDRIVEKGWFPETDAAKAMGQICDALAFLHKKSIMHRDIKPENILYAHPGPDADIKLADFGLAKALESGTSARNTMCGTPGYIAPEILLSKPYGTPVDMFAVGSILYLMLSGSEPFYDETDMGVFERIAACSYSMDYPEWEAVSDNAKDLVSRLLVFHPEDRLSAEDALRHPWIQELAPGAEIEPRKLERSMSIKQENLKTWNARRKWKASLKAVRAVARMGRGSLW* # PASA_UPDATE: g1380.t1, single gene model update, valid-1, status:[pasa:asmbl_2275,status:12], valid-1 NODE_1665_length_9912_cov_37.7767 . gene 459 2181 . + . ID=g1380;Name=g1380.t1 NODE_1665_length_9912_cov_37.7767 . mRNA 459 2181 . + . ID=g1380.t1;Parent=g1380;Name=g1380.t1 NODE_1665_length_9912_cov_37.7767 . five_prime_UTR 459 460 . + . ID=g1380.t1.utr5p1;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . exon 459 609 . + . ID=g1380.t1.exon1;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . CDS 461 609 . + 0 ID=cds.g1380.t1;Parent=g1380.t1;5_prime_partial=true NODE_1665_length_9912_cov_37.7767 . exon 848 1046 . + . ID=g1380.t1.exon2;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . CDS 848 1046 . + 1 ID=cds.g1380.t1;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . exon 1365 1442 . + . ID=g1380.t1.exon3;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . CDS 1365 1442 . + 0 ID=cds.g1380.t1;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . exon 1822 2181 . + . ID=g1380.t1.exon4;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . CDS 1822 1875 . + 0 ID=cds.g1380.t1;Parent=g1380.t1 NODE_1665_length_9912_cov_37.7767 . three_prime_UTR 1876 2181 . + . ID=g1380.t1.utr3p1;Parent=g1380.t1 #PROT g1380.t1 g1380 DFGLAKVLEKDLSYNTMCGTPGYIAPEIILSKPYGTPVDMFAVGVILFITLSGTEPFYEESDAAVFQRIAACDYSLSDHAWDPISAGAKDLVKRLLVLDGKERLTAEQTLKHPWIRELAPESVKLTTTYENLKKWNAKRKWKAGVKAVQALGRLRNHEV* # ORIGINAL: g1382.t1 original gene structure, not modified by PASA NODE_1665_length_9912_cov_37.7767 . gene 6999 9802 . - . ID=g1382;Name=g1382.t1 NODE_1665_length_9912_cov_37.7767 . mRNA 6999 9802 . - . ID=g1382.t1;Parent=g1382;Name=g1382.t1 NODE_1665_length_9912_cov_37.7767 . exon 9678 9802 . - . ID=g1382.t1.exon1;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . CDS 9678 9802 . - 0 ID=cds.g1382.t1;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . exon 8099 9323 . - . ID=g1382.t1.exon2;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . CDS 8099 9323 . - 2 ID=cds.g1382.t1;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . exon 7792 7917 . - . ID=g1382.t1.exon3;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . CDS 7792 7917 . - 0 ID=cds.g1382.t1;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . exon 6999 7409 . - . ID=g1382.t1.exon4;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . CDS 7314 7409 . - 0 ID=cds.g1382.t1;Parent=g1382.t1 NODE_1665_length_9912_cov_37.7767 . three_prime_UTR 6999 7313 . - . ID=g1382.t1.utr3p1;Parent=g1382.t1 #PROT g1382.t1 g1382 MHARNHTRIFVPAAGPDPNGGETHAQAHTVAYNILSELEDLRSRLTSLRIRAESGASEAQSATAAAVASSAPATTTAIVGEEIQSSYLGGSYSVISGGTSIAPTDSESSRVSADELEALESKIADANKLLRKWEERLNSVDSPAYVPQLLCLAAAQSRAEYLDSALQTCETAARVSYANGMPTTRKAVLLLAHLAERSGSAGERLSMYQRQVSSNPRLYGYTYALMAELFLLGTDQSQGSSSSASGASAASALAGLASSGAAASGANGGGSASAPRSRRFSDGAALAHHAHAVSSPISMGDNDSDDGSGGGGGVGSHADDVSSGLSGPSPRSVLTRHASFTSRGNGRDARDRPPTTRVLFPSASLSSSGGSASSGGASQAQLQAASASSGGAGGRQHSASVERAKDCLKEGIALYPEDQWMYVRLSILLRPERATEAEICLRFDGLPQLRILLGVYFSGDFPQKAMENFDRAKKEFPESRLLDFYIATAEHDLKTQSAGSKMLKKLEYGFRELGSGLKSPAKK* # ORIGINAL: g7075.t1 original gene structure, not modified by PASA NODE_3628_length_3088_cov_34.2134 AUGUSTUS gene 2 1923 . + . ID=g7075;Name=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS mRNA 2 1923 . + . ID=g7075.t1;Parent=g7075;Name=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS exon 2 597 . + . ID=g7075.t1.exon1;Parent=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS CDS 2 597 . + 0 ID=cds.g7075.t1;Parent=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS exon 833 1043 . + . ID=g7075.t1.exon2;Parent=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS CDS 833 1043 . + 1 ID=cds.g7075.t1;Parent=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS exon 1270 1923 . + . ID=g7075.t1.exon3;Parent=g7075.t1 NODE_3628_length_3088_cov_34.2134 AUGUSTUS CDS 1270 1923 . + 0 ID=cds.g7075.t1;Parent=g7075.t1 #PROT g7075.t1 g7075 PLPHLSATAVLADPDVVPAGFEIVQAFAITRHGDRTLRNDPSESGPQLTLRGIRQHFEQGSFVKNRYMNISLDSRIPNFSAVYNFSQLRTRATDFDRTIVSAKAFILGLFSPVPRNLTNLLGTVTAPNDMQHIPIHMVDGTTDYMLRGYVLCPSYDAKIAAWYKTAEFTNRSTAARPLLDRIQGKGIIASARLDNIFDVYDAVVLRSLYDLTFKGISDADWAALVELVGWSEGRKHSLELLGTVGAGPFFTEILRRIDLRLNKDPTAHMFQLYSTHYSNLLAILGTLNATAPAELPKLLFTVPDYASLMLFEVLRNVSSNDHFVRLVYRHGDVPHNFTSNNETFLTFLGDDASNARYLESVVVPIFGKTMCPLSVFRAAVASFPVRDAATFCDVCNNTALPVCVKRAYDTLVAQTSATVAGNNNCTVPYSGGGSSGVSALGAGFIGAFCMLAVIVVIVVLRFIIVKRVDADSKGQFECLAMTEAES* # ORIGINAL: g11778.t1 original gene structure, not modified by PASA NODE_1306_length_12272_cov_47.6544 AUGUSTUS gene 144 1861 . - . ID=g11778;Name=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS mRNA 144 1861 . - . ID=g11778.t1;Parent=g11778;Name=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 1852 1861 . - . ID=g11778.t1.exon1;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 1852 1861 . - 0 ID=cds.g11778.t1;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 1426 1500 . - . ID=g11778.t1.exon2;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 1426 1500 . - 2 ID=cds.g11778.t1;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 1004 1145 . - . ID=g11778.t1.exon3;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 1004 1145 . - 2 ID=cds.g11778.t1;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 610 704 . - . ID=g11778.t1.exon4;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 610 704 . - 1 ID=cds.g11778.t1;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 144 229 . - . ID=g11778.t1.exon5;Parent=g11778.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 144 229 . - 2 ID=cds.g11778.t1;Parent=g11778.t1 #PROT g11778.t1 g11778 MASNANAPVGFNWRPFVYGGFASMAAEILTFPIDTTKTRLQLQGQQGTAAAPRYSGMINAGITIARDEGVLRLYRGIAPALLRQASYGTIKIGVYQSLKRLIVKDPKDETLLQNICAGALAGMISSSIATPTDVVK # ORIGINAL: g11779.t1 original gene structure, not modified by PASA NODE_1306_length_12272_cov_47.6544 AUGUSTUS gene 2175 6178 . + . ID=g11779;Name=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS mRNA 2175 6178 . + . ID=g11779.t1;Parent=g11779;Name=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 2175 3233 . + . ID=g11779.t1.exon1;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 2175 3233 . + 0 ID=cds.g11779.t1;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 3727 5390 . + . ID=g11779.t1.exon2;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 3727 5390 . + 0 ID=cds.g11779.t1;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 5672 5827 . + . ID=g11779.t1.exon3;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 5672 5827 . + 1 ID=cds.g11779.t1;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 6073 6178 . + . ID=g11779.t1.exon4;Parent=g11779.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 6073 6178 . + 1 ID=cds.g11779.t1;Parent=g11779.t1 #PROT g11779.t1 g11779 MDEDSLRSAAVESVADSCFVFLPKTAPPSRNARDKACPAPPTEDAAVAHFRDSWATVRTAVDDILSDTADSALDGIARFVRDAEIHRRRSRVHLEPRSAAVGETDGRQKVAKSASKNSTVGAPILKVITGGTAHDAAHAAHVATHDAARAGSNATMAPPFDEIPCALLHSGETWGRQMLTERLVSRMRSLMNASGNESKAAHQCASIPAPRVAVLRSAECPTLRATYARFIAAVTGEDVVADETEEGEAHVDADAEGGRISLGAGVTGARVTGAGRQRPLRPTFEGLRDWMCANLGGGMKQSDALRSIHIVVVFEDFECFAPDAVCDFIRVCAKYRSEMGISFVLGMSTSLDAIHRLLPRSVVSVLRTERFRMHNTAVCFEAVVRRIFLSPTIPLKIGGNAYAVVCDSFFRDSMSIPLLLARLEYALLRHVTSDPASLLSEQWCPSLRDANTAQHAQPAAYTAADKAKSLARPKARKTATTTARAGAHSDVADGPVSDDVCRASPATVDGCRRLLSFRRHVESIGSQPALQRSLILDDNCMRVFVGECVVSARLHVLGMHTALACLIECAAVVPETSLGKSWAKLFGTAIARDIWAAEGYAELLALLRVTARDALASLCIRVAAIVAEGIEEVRAFAQQHNGSRNGTDGANADTLGESLRTRRDALVILGAALSGNRAAGGRLSATANSPVGGVHEVQKASNTAPTVPVKANQLQAASKPLRSVSHPSPRKRSRAAAATEPTDDSHLAGVSVAGVGVAVTSGGVPSEGAKWSAAKRRRVAFEQATAAAGDGLGLGLGLDAVGNAARDALAGGADVDSRGAQRADDHVTDAQLRQSVVAWVDGMLRAHARPLHRAVVLSEALYCDNALVLKEAFLAAPRASIQSALLRPQEYISGLQPGRARTASDGLRDMPDVCVAYRLHLECGRLINLYDWMRSFVSIVSPATDIEEETADSPYFLSLQARFVRAVSELQFLGFIKPTKRKTDHVARLTWGSL* # ORIGINAL: g11780.t1 original gene structure, not modified by PASA NODE_1306_length_12272_cov_47.6544 AUGUSTUS gene 8276 11816 . - . ID=g11780;Name=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS mRNA 8276 11816 . - . ID=g11780.t1;Parent=g11780;Name=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 11702 11816 . - . ID=g11780.t1.exon1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 11702 11816 . - 0 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 11057 11463 . - . ID=g11780.t1.exon2;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 11057 11463 . - 2 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 10614 10816 . - . ID=g11780.t1.exon3;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 10614 10816 . - 0 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 9900 10229 . - . ID=g11780.t1.exon4;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 9900 10229 . - 1 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 9426 9600 . - . ID=g11780.t1.exon5;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 9426 9600 . - 1 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 8628 9055 . - . ID=g11780.t1.exon6;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 8628 9055 . - 0 ID=cds.g11780.t1;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS exon 8276 8447 . - . ID=g11780.t1.exon7;Parent=g11780.t1 NODE_1306_length_12272_cov_47.6544 AUGUSTUS CDS 8276 8447 . - 1 ID=cds.g11780.t1;Parent=g11780.t1 #PROT g11780.t1 g11780 MQLASFSLGESKAAEAASPSRDEFVPFPRLSGASFNANGTLVSFSARVCRPGARTMPRSYDRFRAFAAETGNPSLGSHFSARRHGHTHSSSLGGRGDSFSRPPLGGGRSNASLDRYSMPYVGSYGGLSGLHGLGGLEGDPSTASLFVGGASPTDDIDADLFDDGLGMSAYYSKRSVPGRLVHPGSPSSGASSPFFLPSKNAPGPGKGRGSIANRASALPSTVTIYDASIVMPISRALGELYTLSGPSPSDVCRANASAARVVGRDDLVRLWDAAGLALDQSVVSPMGHVLARMQHMAAAGVYSAARPLHSGKGASKDARSALASAGFGMCAADAVLTPWSHHPFARTLFESYVKHYEQQRDVQTLAMLTCVFALPDVRGRSSSATPGLYGMPNVPSSVALVRKHKPNPYMKRDGASPAHAHGHPQAFSGSLSSSASVVMGSQAPFSPTAHAHGAHPSTALSQPVPMAGVPLSAPQSQTNLATSVSSAVGGERYVASDIDFFGGFTGRDILQAKPDVPPSSNLPTPLSYAHVVAAGTADHQLGTSGERRGDDWMMLDPRRAATFDAYRRAYADILYAWGEHESRAEVLKFVTDPPNPHIGVGEWLQYYHH* # ORIGINAL: g1898.t1 original gene structure, not modified by PASA NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS gene 775 3163 . - . ID=g1898;Name=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS mRNA 775 3163 . - . ID=g1898.t1;Parent=g1898;Name=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS exon 2922 3163 . - . ID=g1898.t1.exon1;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS CDS 2922 3163 . - 0 ID=cds.g1898.t1;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS exon 2381 2814 . - . ID=g1898.t1.exon2;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS CDS 2381 2814 . - 1 ID=cds.g1898.t1;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS exon 1432 2122 . - . ID=g1898.t1.exon3;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS CDS 1432 2122 . - 2 ID=cds.g1898.t1;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS exon 775 1165 . - . ID=g1898.t1.exon4;Parent=g1898.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS CDS 775 1165 . - 1 ID=cds.g1898.t1;Parent=g1898.t1 #PROT g1898.t1 g1898 MISNLSVTENITLRDGQTIAEVEPLDADEYDVRDLPVGMDTAEFATLAKMSPQEAVNLVNTDEAESTNNAQQLSSRIDSVIKCDIEDLQKVLELMVDTGLKLQPSKCHFFRKELLFLSHIISSNGIKPDPEKLSAIREAPILTNLRELRGFLGMTGYYRHFIKNYAKVAYPLTQLLRKEEDFIWTEDCTVAFATLRNALTSTPIVGYPDPKQPYIVQADASGRGLALFEYDFEVRYRKGRDNANADYPSRYPIGPAAPDGSIPEDNIRCTPEDLMMIQTERSDPLTETIRMLKAHRTLAPLEQDERAPTVVELLAKLHLFEARTGINTLREEQHKDETCNAYIQWLQDGTYPDFTVTAEQQHKWARRALMFQVIDGILYRIENNNGVIGEEDDTDVQVEGARAVIPKSLQARSWNDSTTTRSPVIMEGRAHIIVLPNVITGPDLRRTWKRTCDRASDNASPNISQLMADVAQVVDVNQQFISPHHPQANGAVERMMRTVKDDLASMLEGQMDEWDLYAKAVAFAYNVSRHDTTTFSPFFLNTGRQAKTPTDVSMEPDKKLGPELESEYAQKLEDRLSTAYSFVRE* # ORIGINAL: g1899.t1 original gene structure, not modified by PASA NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS gene 3286 3687 . - . ID=g1899;Name=g1899.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS mRNA 3286 3687 . - . ID=g1899.t1;Parent=g1899;Name=g1899.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS exon 3286 3687 . - . ID=g1899.t1.exon1;Parent=g1899.t1 NODE_3209_length_4010_cov_51.0605_potentialcontaminant AUGUSTUS CDS 3286 3687 . - 0 ID=cds.g1899.t1;Parent=g1899.t1 #PROT g1899.t1 g1899 MIRVKITFGDQHYFHKFVMVKDLDYDLILGMDFLAPRKARITLSDPATLILENAKPIPLRTNMNETVFTNSTDSAHKTATEPSDTGATTAGSARTSGRSQTTSERVQLRAQGIATDGLEIKPLSFVYIHAEAR* # ORIGINAL: g3241.t1 original gene structure, not modified by PASA NODE_20635_length_147_cov_95.4167 AUGUSTUS gene 1 147 . - . ID=g3241;Name=g3241.t1 NODE_20635_length_147_cov_95.4167 AUGUSTUS mRNA 1 147 . - . ID=g3241.t1;Parent=g3241;Name=g3241.t1 NODE_20635_length_147_cov_95.4167 AUGUSTUS exon 1 147 . - . ID=g3241.t1.exon1;Parent=g3241.t1 NODE_20635_length_147_cov_95.4167 AUGUSTUS CDS 1 147 . - 0 ID=cds.g3241.t1;Parent=g3241.t1 #PROT g3241.t1 g3241 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK # ORIGINAL: g5307.t1 original gene structure, not modified by PASA NODE_4858_length_1187_cov_29.8156 AUGUSTUS gene 1 979 . - . ID=g5307;Name=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS mRNA 1 979 . - . ID=g5307.t1;Parent=g5307;Name=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS exon 848 979 . - . ID=g5307.t1.exon1;Parent=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS CDS 848 979 . - 0 ID=cds.g5307.t1;Parent=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS exon 364 616 . - . ID=g5307.t1.exon2;Parent=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS CDS 364 616 . - 0 ID=cds.g5307.t1;Parent=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS exon 1 110 . - . ID=g5307.t1.exon3;Parent=g5307.t1 NODE_4858_length_1187_cov_29.8156 AUGUSTUS CDS 1 110 . - 2 ID=cds.g5307.t1;Parent=g5307.t1 #PROT g5307.t1 g5307 MDLSALLGADRQGWLEKEGGNVKSWKSRWFVLKGTSLFYYLDHKDPNALGQIANVDKAKIVIPESESKGGLFARKNRNQYVFMLELPDRTWKLAAPDKLTMEGWVAAVRDAATRGSRAQAAAAAAAMQDRFRSTSSAQPIAPERKSSITPVTPSTTESPAPAPAP # PASA_UPDATE: g8211.t1, single gene model update, valid-1, status:[pasa:asmbl_9758,status:3], valid-1 NODE_868_length_16530_cov_55.058 . gene 7661 9298 . + . ID=g8211;Name=g8211.t1 NODE_868_length_16530_cov_55.058 . mRNA 7661 9298 . + . ID=g8211.t1;Parent=g8211;Name=g8211.t1 NODE_868_length_16530_cov_55.058 . five_prime_UTR 7661 7799 . + . ID=g8211.t1.utr5p1;Parent=g8211.t1 NODE_868_length_16530_cov_55.058 . exon 7661 8053 . + . ID=g8211.t1.exon1;Parent=g8211.t1 NODE_868_length_16530_cov_55.058 . CDS 7800 8053 . + 0 ID=cds.g8211.t1;Parent=g8211.t1 NODE_868_length_16530_cov_55.058 . exon 8427 9298 . + . ID=g8211.t1.exon2;Parent=g8211.t1 NODE_868_length_16530_cov_55.058 . CDS 8427 9210 . + 1 ID=cds.g8211.t1;Parent=g8211.t1 NODE_868_length_16530_cov_55.058 . three_prime_UTR 9211 9298 . + . ID=g8211.t1.utr3p1;Parent=g8211.t1 #PROT g8211.t1 g8211 MATAEDRSATIFSCNTYLIPWFSVEYYVRKNPEISIESCKDQTVRAERIGKAASQFDIVALQEMWGSDADVVEGSIKDSHSVVERNKSHFGVLGTGWFATAFNAYNFNKLRNGGLYFASRHALPVVWERHLNFAANAGEEGIFKSLSIVLVNMDALWPKKHLLILNTHLHSPQPYGDSEQRRAQRKEVRDALIAIQEEEKYPDGFLWSSCGVMYMGDFNTACHKREIPEEYTAEYLETLTSFVPSMPLRDLYLETNPDCRKFTYDGAGNQYVSKKSQDDSARLDYIFAADAIPSRPSSAGSSASSGDGFRRVMRLENEGCNILYPPPGEEFSDHHPVIAKVRPAL* # ORIGINAL: g8208.t1 original gene structure, not modified by PASA NODE_868_length_16530_cov_55.058 AUGUSTUS gene 578 2894 . - . ID=g8208;Name=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS mRNA 578 2894 . - . ID=g8208.t1;Parent=g8208;Name=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 2796 2894 . - . ID=g8208.t1.exon1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 2796 2894 . - 0 ID=cds.g8208.t1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 2550 2666 . - . ID=g8208.t1.exon2;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 2550 2666 . - 0 ID=cds.g8208.t1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 1674 2352 . - . ID=g8208.t1.exon3;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 1674 2352 . - 0 ID=cds.g8208.t1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 1341 1430 . - . ID=g8208.t1.exon4;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 1341 1430 . - 2 ID=cds.g8208.t1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 1060 1201 . - . ID=g8208.t1.exon5;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 1060 1201 . - 2 ID=cds.g8208.t1;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS exon 578 920 . - . ID=g8208.t1.exon6;Parent=g8208.t1 NODE_868_length_16530_cov_55.058 AUGUSTUS CDS 578 920 . - 1 ID=cds.g8208.t1;Parent=g8208.t1 #PROT g8208.t1 g8208 MLDKTKRPLQVPPDFAKYAEKHGIFDLYENLLQRLVIEQPADPLAFMIAAIRQPIVPRVIVFGPPASGKDTVCAAIEEQLGVVHVSATQLVEVAIREGTPAGLKAKAALEAGEQVPTALLVSLILARVGAPDCAARGWILQGFPRTRDDALALQAAGVLAKHFISLELPRDVCAVRTAGRRVQPGSGRVYHTTFNPPPAELADLLTRHADDNVEGRVEKRWDDHVRSTPGITSCYGKSKAVVNADQPLRDVFAQVRDIVLSRTHSRAPSVVRAIFYGPPGCGKKTQARLFASKYGIVHVSTGTILKQEAALGTELGEKIKPFVDDNLRVPDDLVVAVVKKRLLHKDCLARGFIIEGFPRDVQQLDLLRDEGIEPNRAIFFDIAEEIARERLLLRRVDPQTGTVYHLLENPPQSEDVRGRLTRHPKDADERVMSRFTDYHLGRDDLLSALSRIAQHVNAAQESHAMFEKIESLLIRPTPMAPPVLDDPMD* # PASA_UPDATE: g8212.t1, single gene model update, valid-1, status:[pasa:asmbl_9759,status:12], valid-1 NODE_868_length_16530_cov_55.058 . gene 10191 15447 . + . ID=g8212;Name=g8212.t1 NODE_868_length_16530_cov_55.058 . mRNA 10191 15447 . + . ID=g8212.t1;Parent=g8212;Name=g8212.t1 NODE_868_length_16530_cov_55.058 . exon 10191 10363 . + . ID=g8212.t1.exon1;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . CDS 10191 10363 . + 0 ID=cds.g8212.t1;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . exon 10514 13729 . + . ID=g8212.t1.exon2;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . CDS 10514 13729 . + 1 ID=cds.g8212.t1;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . exon 13955 15447 . + . ID=g8212.t1.exon3;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . CDS 13955 15029 . + 1 ID=cds.g8212.t1;Parent=g8212.t1 NODE_868_length_16530_cov_55.058 . three_prime_UTR 15030 15447 . + . ID=g8212.t1.utr3p1;Parent=g8212.t1 #PROT g8212.t1 g8212 MASSSPSFNPWRAPALDTGRIEAENSRLEAEVRRMQEALELHKSRLSTGDAERKSAKKSIWKSAKPPKPKSSDGRKEGPEALLRKDTTTTTPRPVVMLVEEGDAGRKTAAPLANGEVGSQSAPLLNSMGREAAAPIRPSIAGERTSGGVVKVSSRNTGGGGGPNEDARVPGGRTKIASASAKHGDSRGEDRSTRALLAMLDATTQARSAPKDKNNVSSGVASGMRGPNSPPGSPSPSSLLQSPPATATASNNTTTSNTAAASKTATDDVRRMSSKKKGLSSQTRPKSGIPAEASPLVSFPSAEEINVADEASPGDSLNARPSAASGRQKSAGSASRGGTAGLLGSLRRSAAAKAHTGATTAPQPTPAAVLPSPPPPAAPSVHAQLQPPPPPPQPAISTGTAPAVNSKDPVGGKKRVVNTHIAQQSAKMSSDPPPPAASSVHAQHPPPPPPPPAAPMATTSTVSSGKRQVATTPGLRDGDQTGKKKTTKKGASTAPGAPLADTRDAPLDNPPPDVPRPSSRARRAPRDEPRSELHDTGDGQSEVAPCSPQGVDAAGGNHHASTDAHPKADSQPPPLHKEPSSTPLVLEGEVGVWLSSLNIRDVAKYAALFEEHEIDMDSLVMVTESQLREMGVTAIGTLNKIAAGIEVLRKQQAQSNNNNSHSNNSKTISNNAPSTPVDDGPERAGGGRKKGVDGRRDDGATGALSKSAAFGSLRSSLTKHHARANAPAGTESPQSAASGHVDGGHSTDGAPTLAQQGLGRASTSAASAATQGGATTTPRSRPSSGTRPPPVPRAPIVRPPRAGVVLQPAVFDLSMGLTRQQSDNGGKPDDALLHQAARKTAVDAAHTGDGGQASLLASSRMQHAAEIARMVEELRGQTNRLHGGGGAAGLGSPSMTKRSGDEDKAHALDKTASLIKLLETYISSEGVKGGVSEELLTAARVRIDLNEQALGSGGSGDINGVVSGSAPSPLQRQQHETQQQQQHDHDTDLTTDGNERPDFEIGADEIQYSEKAVLGSGAFAEVFRGTYHGTDVAVKRLRATVDGRHRAYFLSEAAMLHRLRHPNIILFLGACTASRRPIMVLEYMVGGSLYDLIHRKSGAPWLDDHVTFHKIARDIAQGMNFLHMHRPPIVHRDLKSPNVLLEGSGTAKISDFGFSRLKLDAAATMSGGLRGTPAWLAPEAFEGRALALTTKADVYAYGVILWEMASRKRPFEGLSLVEIMTSVRSGTRPAFPAGCPDGLVSLASKCWHQQAASRPEFASVLVDLDALVFPPEWRTLLARAGIRQDELADPATAMFVVDLVARSVCGPSPLAAAATTGSARANTNVPANGNASAAAPRSVAVGASSLKRAMNKQLQQQIKTVGATMTAAHEDSGNEPPRPPRGASKPVPLQRGSASPGVSDARAGGGISEEKLESLLDEINAGKRSLRPTSGPNARQLADIKDLAPTVVGDLTTILRTAFERRRGAIRESEPSLASSAPASNWTAAYD* # PASA_UPDATE: g8210.t1, single gene model update, valid-1, status:[pasa:asmbl_9757,status:3], valid-1 NODE_868_length_16530_cov_55.058 . gene 5415 7189 . + . ID=g8210;Name=g8210.t1 NODE_868_length_16530_cov_55.058 . mRNA 5415 7189 . + . ID=g8210.t1;Parent=g8210;Name=g8210.t1 NODE_868_length_16530_cov_55.058 . five_prime_UTR 5415 5488 . + . ID=g8210.t1.utr5p1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . exon 5415 5561 . + . ID=g8210.t1.exon1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . CDS 5489 5561 . + 0 ID=cds.g8210.t1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . exon 5704 5769 . + . ID=g8210.t1.exon2;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . CDS 5704 5769 . + 2 ID=cds.g8210.t1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . exon 5888 6020 . + . ID=g8210.t1.exon3;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . CDS 5888 6020 . + 2 ID=cds.g8210.t1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . exon 6297 6510 . + . ID=g8210.t1.exon4;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . CDS 6297 6510 . + 1 ID=cds.g8210.t1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . exon 6777 7189 . + . ID=g8210.t1.exon5;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . CDS 6777 7016 . + 0 ID=cds.g8210.t1;Parent=g8210.t1 NODE_868_length_16530_cov_55.058 . three_prime_UTR 7017 7189 . + . ID=g8210.t1.utr3p1;Parent=g8210.t1 #PROT g8210.t1 g8210 MALQHAIISPECDTELFVNFNVFNAACTKLAIAKGLGLAIIAGSAIVKVPQIVKIVSAKSVHGLSLASFLIELFGYSIAVAYNYTHKFPFETWGELSFLAVQNVALVVLFLSFTHKAGLIPVFLGAYGGAVYALSTGMVPAETLKTLQALTIPLFFLSKLPQIVTNFKNGHTGQLSAITTFMNFAGTASRIFTTLTQVDDKLMLLSHLLSTILNGIITLQMIFYWKKTHHAAKDARTKKTK* # PASA_UPDATE: g8209.t1, single gene model update, valid-1, status:[pasa:asmbl_9756,status:3], valid-1 NODE_868_length_16530_cov_55.058 . gene 3356 5087 . + . ID=g8209;Name=g8209.t1 NODE_868_length_16530_cov_55.058 . mRNA 3356 5087 . + . ID=g8209.t1;Parent=g8209;Name=g8209.t1 NODE_868_length_16530_cov_55.058 . five_prime_UTR 3356 3501 . + . ID=g8209.t1.utr5p1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . exon 3356 3534 . + . ID=g8209.t1.exon1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . CDS 3502 3534 . + 0 ID=cds.g8209.t1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . exon 3701 3796 . + . ID=g8209.t1.exon2;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . CDS 3701 3796 . + 0 ID=cds.g8209.t1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . exon 3972 4049 . + . ID=g8209.t1.exon3;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . CDS 3972 4049 . + 0 ID=cds.g8209.t1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . exon 4414 4522 . + . ID=g8209.t1.exon4;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . CDS 4414 4522 . + 0 ID=cds.g8209.t1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . exon 4838 5087 . + . ID=g8209.t1.exon5;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . CDS 4838 4992 . + 2 ID=cds.g8209.t1;Parent=g8209.t1 NODE_868_length_16530_cov_55.058 . three_prime_UTR 4993 5087 . + . ID=g8209.t1.utr3p1;Parent=g8209.t1 #PROT g8209.t1 g8209 MASSAARRLAKELQDVNAMDLKTIRNVEVDEANILNWEVLLVPETAPYNKGAFKVSLQFLPEYPFKPPKVTFKTKIYHPNVDESGQICVQMLKPDNWKPATRVHQILLSLVQLIDEPNPSDPLSTEIADIFVNDKKKYVKNVEEHIKKHAEKRPKE* # PASA_UPDATE: g8213.t1, single gene model update, valid-1, status:[pasa:asmbl_9755,status:12], valid-1 NODE_868_length_16530_cov_55.058 . gene 15252 16488 . - . ID=g8213;Name=g8213.t1 NODE_868_length_16530_cov_55.058 . mRNA 15252 16488 . - . ID=g8213.t1;Parent=g8213;Name=g8213.t1 NODE_868_length_16530_cov_55.058 . exon 16485 16488 . - . ID=g8213.t1.exon1;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . CDS 16485 16488 . - 0 ID=cds.g8213.t1;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . exon 16005 16328 . - . ID=g8213.t1.exon2;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . CDS 16005 16328 . - 2 ID=cds.g8213.t1;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . exon 15252 15726 . - . ID=g8213.t1.exon3;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . CDS 15404 15726 . - 2 ID=cds.g8213.t1;Parent=g8213.t1 NODE_868_length_16530_cov_55.058 . three_prime_UTR 15252 15403 . - . ID=g8213.t1.utr3p1;Parent=g8213.t1 #PROT g8213.t1 g8213 MAETFLTTAAETDRSGFLTRLRDIWDIQFIAWDANKRIKGEHVFGSRPGDWPVLKRGISYWQNNGKHVQVYLMGNPLVWWCALPAVAIYFVMGAIYLVRWRRGYRDFEPEGRRKFILVADFLVLGWFLHYAPFFAMERQLFLHHYLPAHLFTLLGLGALADHCISWLRLRFRVAAIAVITAAVVWSFWYFAPLCYATPLLPDESDARKWLSNWDFV* # ORIGINAL: g9635.t1 original gene structure, not modified by PASA NODE_960_length_15439_cov_42.9406 AUGUSTUS gene 7640 8061 . - . ID=g9635;Name=g9635.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS mRNA 7640 8061 . - . ID=g9635.t1;Parent=g9635;Name=g9635.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS exon 8010 8061 . - . ID=g9635.t1.exon1;Parent=g9635.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS CDS 8010 8061 . - 0 ID=cds.g9635.t1;Parent=g9635.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS exon 7640 7890 . - . ID=g9635.t1.exon2;Parent=g9635.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS CDS 7640 7890 . - 2 ID=cds.g9635.t1;Parent=g9635.t1 #PROT g9635.t1 g9635 MATVAVQNKMSMQQASDVPATGIYSQSLAEMTDPLRQLREGMMKLSAVLEANTKSMIYIDEDDGMEHEMAMAGIRGLHAQLEGMWLACQAKARDEASRAH* # PASA_UPDATE: g9633.t1, single gene model update, valid-1, status:[pasa:asmbl_10137,status:12], valid-1 NODE_960_length_15439_cov_42.9406 . gene 385 2500 . - . ID=g9633;Name=g9633.t1 NODE_960_length_15439_cov_42.9406 . mRNA 385 2500 . - . ID=g9633.t1;Parent=g9633;Name=g9633.t1 NODE_960_length_15439_cov_42.9406 . five_prime_UTR 2309 2500 . - . ID=g9633.t1.utr5p1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . exon 2080 2500 . - . ID=g9633.t1.exon1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . CDS 2080 2308 . - 0 ID=cds.g9633.t1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . exon 1816 1877 . - . ID=g9633.t1.exon2;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . CDS 1816 1877 . - 2 ID=cds.g9633.t1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . exon 1303 1492 . - . ID=g9633.t1.exon3;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . CDS 1303 1492 . - 0 ID=cds.g9633.t1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . exon 838 1071 . - . ID=g9633.t1.exon4;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . CDS 838 1071 . - 2 ID=cds.g9633.t1;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . exon 385 567 . - . ID=g9633.t1.exon5;Parent=g9633.t1 NODE_960_length_15439_cov_42.9406 . CDS 385 567 . - 2 ID=cds.g9633.t1;Parent=g9633.t1;3_prime_partial=true #PROT g9633.t1 g9633 MARSSVAAAVSEWGIQTPPLSASPGRAVANSAQLPQARSQSSGGVGAVASMSDAQGRGSVNLDAFLRTLMNTSDPRDFNSPNFDAIARLLPGVTAKQCALRWEEMRGLKAPSPATNRNPVAAPLNGSNSGNGSGRAFLSINGRDITSVRPEGNSASPRQNATQTDQRPSQSAENASTRPPPDAATVQGQRQGGDAHAHESAGAVPQQQRPKLKVYKSPIVDDAERKSIVIHVCDEAKKVTQDFLCDRIILTREMRYFASYLSEKGKGDELDISVHCDIKIFDWLMKYIHAPNEDDRPNL # ORIGINAL: g9636.t1 original gene structure, not modified by PASA NODE_960_length_15439_cov_42.9406 AUGUSTUS gene 9478 11211 . + . ID=g9636;Name=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS mRNA 9478 11211 . + . ID=g9636.t1;Parent=g9636;Name=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS exon 9478 9823 . + . ID=g9636.t1.exon1;Parent=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS CDS 9478 9823 . + 0 ID=cds.g9636.t1;Parent=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS exon 10121 10338 . + . ID=g9636.t1.exon2;Parent=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS CDS 10121 10338 . + 2 ID=cds.g9636.t1;Parent=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS exon 10780 11211 . + . ID=g9636.t1.exon3;Parent=g9636.t1 NODE_960_length_15439_cov_42.9406 AUGUSTUS CDS 10780 11211 . + 0 ID=cds.g9636.t1;Parent=g9636.t1 #PROT g9636.t1 g9636 MAQYASHLRIERKIACGQIGLSETTRWDLRPARSVLGSIGIDVDDAIALSMWQESADHFASRDVSCHFAGVNRGPGALGAPDCTARLRLIIGHYRLACQWLSLLSRPAWDVPIEEGAILVAQVVHPCLSRSAILQQLDAIADAARPQVLAANTPRERVEALNVFFFCTLSFRGNVTNYYHLDNSCIDKVLETRMGLPITLSIIYVAVANRLSLPAQIVNYPGHVLARVYVGGNAAPAISSTNDAPAQTYMHTPQAPDGAPPGDFVVVDSFRQGRPNISPHDVADYAPTSPRFIYDRMLRNINNLYMSEDIANGLDNDVRSAFLRLSAGIFD* # PASA_UPDATE: g9637.t1, single gene model update, valid-1, status:[pasa:asmbl_10139,status:12],[pasa:asmbl_10140,status:12], valid-1 NODE_960_length_15439_cov_42.9406 . gene 13745 15343 . - . ID=g9637;Name=g9637.t1 NODE_960_length_15439_cov_42.9406 . mRNA 13745 15343 . - . ID=g9637.t1;Parent=g9637;Name=g9637.t1 NODE_960_length_15439_cov_42.9406 . five_prime_UTR 15277 15343 . - . ID=g9637.t1.utr5p1;Parent=g9637.t1 NODE_960_length_15439_cov_42.9406 . exon 13745 15343 . - . ID=g9637.t1.exon1;Parent=g9637.t1 NODE_960_length_15439_cov_42.9406 . CDS 13795 15276 . - 0 ID=cds.g9637.t1;Parent=g9637.t1 NODE_960_length_15439_cov_42.9406 . three_prime_UTR 13745 13794 . - . ID=g9637.t1.utr3p1;Parent=g9637.t1 #PROT g9637.t1 g9637 MLGRRVHTLAEALTYLLIAQKHVSVGLPPREQNINRPLPPDELKQLIFNAHGEDLSGAVLTQELIVYLHMFVRSDPGLFDQMLRLRVGLIIEVMQLELSRDLSVDKLEAADRLMRLSPFGVKTLLHRVLSGSEFAVAFDSQDSSGLQTINPGTIRQAPAESVMNAEGMRAAGVDPVLLREQTPSPVPHASAASSSSLNGGRGSLSRQGDDPSRYGTTKKGQWLWRRQLDGTLNRTPLKFYSRVWKVLSRCHGLSTHGKLLPQHPTIQEMTSNELKFALIVEGLLNSIPLPEGRQLAVEALVLLAIIVERSPSWKVDEVIALDAIVDDALAMFADDLRTKMRIAAASTPLQPSRSSTLGLSPLNPSSSLSSMSGQQSLQRAGAGVGGVVGPTPMHATHGVALGMDGPAGTPLPASAHRTETPALSLSTSAPFVPSLTPVPPPSSTSPKSLTPAEMFQRFCDCAPSGRYGTMAYLGYALSKRFRKSFEGLGCPIS* # PASA_UPDATE: g9634.t1, single gene model update, valid-1, status:[pasa:asmbl_10141,status:3], valid-1 NODE_960_length_15439_cov_42.9406 . gene 3294 6118 . + . ID=g9634;Name=g9634.t1 NODE_960_length_15439_cov_42.9406 . mRNA 3294 6118 . + . ID=g9634.t1;Parent=g9634;Name=g9634.t1 NODE_960_length_15439_cov_42.9406 . five_prime_UTR 3294 3337 . + . ID=g9634.t1.utr5p1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 3294 3488 . + . ID=g9634.t1.exon1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 3338 3488 . + 0 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 3586 3649 . + . ID=g9634.t1.exon2;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 3586 3649 . + 2 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 3793 3853 . + . ID=g9634.t1.exon3;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 3793 3853 . + 1 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 4062 4276 . + . ID=g9634.t1.exon4;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 4062 4276 . + 0 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 4663 4774 . + . ID=g9634.t1.exon5;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 4663 4774 . + 1 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 5220 5358 . + . ID=g9634.t1.exon6;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 5220 5358 . + 0 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 5577 5695 . + . ID=g9634.t1.exon7;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 5577 5695 . + 2 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . exon 5833 6118 . + . ID=g9634.t1.exon8;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . CDS 5833 5994 . + 0 ID=cds.g9634.t1;Parent=g9634.t1 NODE_960_length_15439_cov_42.9406 . three_prime_UTR 5995 6118 . + . ID=g9634.t1.utr3p1;Parent=g9634.t1 #PROT g9634.t1 g9634 MSFKTSVVAVVGTGFALLVGTIFACIVFPAMLFRIITNPVKFFATKDRKEEPAILRDAKFGEHAYINANGIRFHYVAKGKGPLMLCLHGFPEFWYSWRHQIVEFSDRYRVVAVDMRGYGNSDKPSGIAPYALPTLLRDVAALIKALGHEKAVVMAHDWGGIVAWQFAMQYPELVDRLIIMNSPHPRAFEDAISLKQLAMSWYIFFFQIPFLPELMLRSFDYGSIKGSYTGKKMGAIRKDAFVADDIEAFKYAFSQPYAATAAINYYRNIFRHPQPRRTIHTPTLIVWGEEDKALSKDSVEPTRKYVPNLTIKMVPGASHWVQQDRPEIVNAAVSAFLSAR* # ORIGINAL: g9484.t1 original gene structure, not modified by PASA NODE_3715_length_2906_cov_35.3532 AUGUSTUS gene 108 2246 . - . ID=g9484;Name=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS mRNA 108 2246 . - . ID=g9484.t1;Parent=g9484;Name=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS exon 1629 2246 . - . ID=g9484.t1.exon1;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS CDS 1629 2246 . - 0 ID=cds.g9484.t1;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS exon 1051 1200 . - . ID=g9484.t1.exon2;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS CDS 1051 1200 . - 0 ID=cds.g9484.t1;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS exon 793 881 . - . ID=g9484.t1.exon3;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS CDS 793 881 . - 0 ID=cds.g9484.t1;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS exon 108 352 . - . ID=g9484.t1.exon4;Parent=g9484.t1 NODE_3715_length_2906_cov_35.3532 AUGUSTUS CDS 108 352 . - 1 ID=cds.g9484.t1;Parent=g9484.t1 #PROT g9484.t1 g9484 MQSIIAANLARARSFEESEGDSAANDPPRPANRTRQSFSFFLNGIAFGGSLRESRRRTSSASDDANDNDSQGSSPPTSTDASASPSTGWRALLPFRMGPRRSYSEGSVGHSGRSSLGGADSDGTTASSVDSTPAGPRRLRSETAPANGSRPSSRGSGRGTPLRRSVVQHEEDETAWIHVEPTMTHGPITDICVLLPESEPTPPGFQVLTRTPMGYSANLNKGSGDRVFVGFRREAGVRPITDVQIVCPETEGCPENYTLVLRTPGGRSANLNHGSLGRPMYLAFTRDTSNASIEELAIMVSSKGEAVPRGFTQIERSTNYGKLSVSKHRVHLCLFRGRRGDDASGDDVGGSTGAMHKLPAYDELDVT # PASA_UPDATE: g7704.t1, single gene model update, valid-1, status:[pasa:asmbl_9138,status:12], valid-1 NODE_740_length_18258_cov_41.5876 . gene 85 2504 . - . ID=g7704;Name=g7704.t1 NODE_740_length_18258_cov_41.5876 . mRNA 85 2504 . - . ID=g7704.t1;Parent=g7704;Name=g7704.t1 NODE_740_length_18258_cov_41.5876 . five_prime_UTR 2133 2504 . - . ID=g7704.t1.utr5p1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 2108 2504 . - . ID=g7704.t1.exon1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 2108 2132 . - 0 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 1851 1928 . - . ID=g7704.t1.exon2;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 1851 1928 . - 2 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 1465 1546 . - . ID=g7704.t1.exon3;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 1465 1546 . - 2 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 1136 1339 . - . ID=g7704.t1.exon4;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 1136 1339 . - 1 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 726 836 . - . ID=g7704.t1.exon5;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 726 836 . - 1 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 391 418 . - . ID=g7704.t1.exon6;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 391 418 . - 1 ID=cds.g7704.t1;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . exon 85 229 . - . ID=g7704.t1.exon7;Parent=g7704.t1 NODE_740_length_18258_cov_41.5876 . CDS 85 229 . - 0 ID=cds.g7704.t1;Parent=g7704.t1;3_prime_partial=true #PROT g7704.t1 g7704 MASADIVEVLNKLVEEKLSLQIEVPSKTAEEEAEEEHDMICGMYGFSDEVRQKFLFERKLGSGNFATVFLVKERANGELHAMKAVVKSRLIDKQKLENEIEALRRASHENIVAYRGTFEDETYKYVLVEYCPGGELLEALVEYGPFPEIVSARIMCEILKGVGYLHSIGVVHRDLKPENVLLMDARNPSKGVKITDFGVVSLFEEKPKARRKMMQSSCGTVHYM # ORIGINAL: g7706.t1 original gene structure, not modified by PASA NODE_740_length_18258_cov_41.5876 AUGUSTUS gene 6617 8687 . - . ID=g7706;Name=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS mRNA 6617 8687 . - . ID=g7706.t1;Parent=g7706;Name=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 8369 8687 . - . ID=g7706.t1.exon1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 8369 8687 . - 0 ID=cds.g7706.t1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 7903 8213 . - . ID=g7706.t1.exon2;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 7903 8213 . - 2 ID=cds.g7706.t1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 7694 7742 . - . ID=g7706.t1.exon3;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 7694 7742 . - 0 ID=cds.g7706.t1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 7369 7529 . - . ID=g7706.t1.exon4;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 7369 7529 . - 2 ID=cds.g7706.t1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 7081 7158 . - . ID=g7706.t1.exon5;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 7081 7158 . - 0 ID=cds.g7706.t1;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 6617 6868 . - . ID=g7706.t1.exon6;Parent=g7706.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 6617 6868 . - 0 ID=cds.g7706.t1;Parent=g7706.t1 #PROT g7706.t1 g7706 MDALVVMGMAAPVGVTTFDHRRSGDGAVEDIRNSPSENNIAVPSSVPSGVNPNAIASLMLDVAVVGAVVTGDEKESPGLCAPVVPAVCDDNAGHIACIKPAAETSQVAGLLVDDVQQLGGDTQDLQGVVSGVVQQQQPQPQQQQPQQQPQQQTSTLLQPRTQSVEDIVGGIRQPPSRQQSNSTPRSRRRKAPSKSEAVFTKSDLQCPICMSVLKQACDVSCGHSFCAACISEQLKRQPQCPVCRGRITSVHPSFALRRLVDSYRAQGTESSSEEEETCTEDAAVVEARRKIDETLESLVAQSTRSARQQETSERDQARGHSRAFVFWAMLLSLLYIWDPFNIRSVEVSGLRYVVDWADEILIIFWIAFFVQRALVSYESPEDEIGYERS* # ORIGINAL: g7705.t1 original gene structure, not modified by PASA NODE_740_length_18258_cov_41.5876 AUGUSTUS gene 4828 6165 . + . ID=g7705;Name=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS mRNA 4828 6165 . + . ID=g7705.t1;Parent=g7705;Name=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 4828 4880 . + . ID=g7705.t1.exon1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 4828 4880 . + 0 ID=cds.g7705.t1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 4987 5011 . + . ID=g7705.t1.exon2;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 4987 5011 . + 1 ID=cds.g7705.t1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 5143 5233 . + . ID=g7705.t1.exon3;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 5143 5233 . + 0 ID=cds.g7705.t1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 5355 5487 . + . ID=g7705.t1.exon4;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 5355 5487 . + 2 ID=cds.g7705.t1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 5735 5868 . + . ID=g7705.t1.exon5;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 5735 5868 . + 1 ID=cds.g7705.t1;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS exon 6083 6165 . + . ID=g7705.t1.exon6;Parent=g7705.t1 NODE_740_length_18258_cov_41.5876 AUGUSTUS CDS 6083 6165 . + 2 ID=cds.g7705.t1;Parent=g7705.t1 #PROT g7705.t1 g7705 MTSLRRFVCADLFKFNNVNLDFFTETYNVSFYLQYLARWPEYFYAAESPSGKIMGYVMGKAEGEGEEWHGHVTALTVAPLYRRLGVADRLMALLEYISEKTYDGYFVDLFVRVSNDVAISMYTKMGYIVYRRVIGYYMEPEEDSFDMRKALSRDVKKKSVIPLKHPVYPSDL* # PASA_UPDATE: g7707.t1, single gene model update, valid-1, status:[pasa:asmbl_9139,status:3], valid-1 NODE_740_length_18258_cov_41.5876 . gene 9756 11704 . + . ID=g7707;Name=g7707.t1 NODE_740_length_18258_cov_41.5876 . mRNA 9756 11704 . + . ID=g7707.t1;Parent=g7707;Name=g7707.t1 NODE_740_length_18258_cov_41.5876 . five_prime_UTR 9756 9912 . + . ID=g7707.t1.utr5p1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . exon 9756 9972 . + . ID=g7707.t1.exon1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . CDS 9913 9972 . + 0 ID=cds.g7707.t1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . exon 10149 10379 . + . ID=g7707.t1.exon2;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . CDS 10149 10379 . + 0 ID=cds.g7707.t1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . exon 10692 10832 . + . ID=g7707.t1.exon3;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . CDS 10692 10832 . + 0 ID=cds.g7707.t1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . exon 11094 11704 . + . ID=g7707.t1.exon4;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . CDS 11094 11315 . + 0 ID=cds.g7707.t1;Parent=g7707.t1 NODE_740_length_18258_cov_41.5876 . three_prime_UTR 11316 11704 . + . ID=g7707.t1.utr3p1;Parent=g7707.t1 #PROT g7707.t1 g7707 MDDWINFFLSRKTLLKILEMILSIITFAVVVSYKKTCTACSYDYTSLDSPCGLISGDSQWVSSAKFIVAVGVVGMVSAMAFLIAYGVIESNQVLLLSSILFTGLWFGIYVIASCFWAVTLTAIDKHDKIGTCFPPDLTNYKVGLAFGFMNCVVWLADFIFLAVNARHELETISKMSSGSSSPRTEVVSAAQSTRGTVSEATASRIQQEPIYDTGSQA* # PASA_UPDATE: g7708.t1, single gene model update, valid-1, status:[pasa:asmbl_9137,status:12], valid-1 NODE_740_length_18258_cov_41.5876 . gene 12495 18146 . - . ID=g7708;Name=g7708.t1 NODE_740_length_18258_cov_41.5876 . mRNA 12495 18146 . - . ID=g7708.t1;Parent=g7708;Name=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 17970 18146 . - . ID=g7708.t1.exon1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 17970 18146 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 17571 17709 . - . ID=g7708.t1.exon2;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 17571 17709 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 16209 17320 . - . ID=g7708.t1.exon3;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 16209 17320 . - 2 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 15356 15955 . - . ID=g7708.t1.exon4;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 15356 15955 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 14949 15017 . - . ID=g7708.t1.exon5;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 14949 15017 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 14607 14723 . - . ID=g7708.t1.exon6;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 14607 14723 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 14338 14440 . - . ID=g7708.t1.exon7;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 14338 14440 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 14081 14153 . - . ID=g7708.t1.exon8;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 14081 14153 . - 2 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 13810 13909 . - . ID=g7708.t1.exon9;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 13810 13909 . - 1 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 13173 13375 . - . ID=g7708.t1.exon10;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 13173 13375 . - 0 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . exon 12495 12890 . - . ID=g7708.t1.exon11;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . CDS 12812 12890 . - 1 ID=cds.g7708.t1;Parent=g7708.t1 NODE_740_length_18258_cov_41.5876 . three_prime_UTR 12495 12811 . - . ID=g7708.t1.utr3p1;Parent=g7708.t1 #PROT g7708.t1 g7708 MITPRNGEPLIAAIQDFITASFVITLRDTFFDRAQFTQICTYMNDAHMQIDIPPPAIVKPARLWTGKQLFNVLFRPNKMSPVVMNLRTPGRTYSKKGEDMCANDGFVVIRNSEVMCGALDKGTLGSGSKNTVFFVLLRDFGEEVAASCMSRLAKMCARFLGNRGFSIGIGDVQPSPRLLEVKEDLVRRGYTKCDDYIAQFREGKLQTQAGCTADQTLEAVINGELSQIREDAGKMCLRELDRHNSPLIMALCGSKGSNINISQMIACVGQQTVSGTRIPNGFEDRALPHFPKNSRLPAAKGFVRNSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLMKALEDLSTQYDLTVRNSIGGVVQFRYGDDGLDPAMMEGKDKPVDFARILAHVRAVLPSPKGVPLLPREMRSRLAASLAETRFHACTSLFTDELRTFFGDLAGTLASARQRYGLDPADAETVNGAVVAANGVGVHAVDVKPDTKTKRGKRDRDDDSDISARAKVRVVAAGGAIASSDAPRDKERRYAESMALRTFRLTGEQLDRFLDTCLLKYQRASIEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITATLESDTDLKMARVAKGRIEKTLLGEVSEYVQEVFRPNECYVLVRLALDRIRLLKLEINVDLVRAAIIGAPKLKLKAQHVFTQGDATLRVYPPENAKASIYYTIQQLKQALPKVIVKGIPTVNRAVLNDMGKGKYNLLVEGYDLKSVMGTEGVSGTRTTSNHIMEVEKTLGIEAARATIMNEIQYTMASHGMNIDTRHVMLLADLMTFKGEVLGITRFGIAKMKESVLMLASFEKTTDHLFDAALHGQRDQINGVSECIIMGIPMSIGTGLFKLLRETPDVNKSLAKKKLLFDQPEMHIGIA* # ORIGINAL: g3108.t1 original gene structure, not modified by PASA NODE_16029_length_236_cov_89.7764_potentialcontaminant AUGUSTUS gene 58 236 . + . ID=g3108;Name=g3108.t1 NODE_16029_length_236_cov_89.7764_potentialcontaminant AUGUSTUS mRNA 58 236 . + . ID=g3108.t1;Parent=g3108;Name=g3108.t1 NODE_16029_length_236_cov_89.7764_potentialcontaminant AUGUSTUS exon 58 236 . + . ID=g3108.t1.exon1;Parent=g3108.t1 NODE_16029_length_236_cov_89.7764_potentialcontaminant AUGUSTUS CDS 58 236 . + 1 ID=cds.g3108.t1;Parent=g3108.t1 #PROT g3108.t1 g3108 TDGFRADIIAIQETLGKPDDDFVSISGYGGVRRNRSEQLGTKGSGGVALYIRKGIRWTA # ORIGINAL: g3124.t1 original gene structure, not modified by PASA NODE_8150_length_385_cov_49.1774_potentialcontaminant AUGUSTUS gene 2 134 . + . ID=g3124;Name=g3124.t1 NODE_8150_length_385_cov_49.1774_potentialcontaminant AUGUSTUS mRNA 2 134 . + . ID=g3124.t1;Parent=g3124;Name=g3124.t1 NODE_8150_length_385_cov_49.1774_potentialcontaminant AUGUSTUS exon 2 134 . + . ID=g3124.t1.exon1;Parent=g3124.t1 NODE_8150_length_385_cov_49.1774_potentialcontaminant AUGUSTUS CDS 2 134 . + 1 ID=cds.g3124.t1;Parent=g3124.t1 #PROT g3124.t1 g3124 LQVLKTVEGTVNPAETFDRQVIRHPVGIALGKFVEIVACAAAK* # PASA_UPDATE: g14164.t1, single gene model update, valid-1, status:[pasa:asmbl_6941,status:3], valid-1 NODE_408_length_24391_cov_43.0764 . gene 14291 17617 . - . ID=g14164;Name=g14164.t1 NODE_408_length_24391_cov_43.0764 . mRNA 14291 17617 . - . ID=g14164.t1;Parent=g14164;Name=g14164.t1 NODE_408_length_24391_cov_43.0764 . five_prime_UTR 17354 17617 . - . ID=g14164.t1.utr5p1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 17233 17617 . - . ID=g14164.t1.exon1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 17233 17353 . - 0 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 16533 17094 . - . ID=g14164.t1.exon2;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 16533 17094 . - 2 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 15931 16160 . - . ID=g14164.t1.exon3;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 15931 16160 . - 1 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 15567 15739 . - . ID=g14164.t1.exon4;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 15567 15739 . - 2 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 15299 15382 . - . ID=g14164.t1.exon5;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 15299 15382 . - 0 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 15017 15096 . - . ID=g14164.t1.exon6;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 15017 15096 . - 0 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 14667 14870 . - . ID=g14164.t1.exon7;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 14667 14870 . - 1 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . exon 14291 14571 . - . ID=g14164.t1.exon8;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . CDS 14343 14571 . - 1 ID=cds.g14164.t1;Parent=g14164.t1 NODE_408_length_24391_cov_43.0764 . three_prime_UTR 14291 14342 . - . ID=g14164.t1.utr3p1;Parent=g14164.t1 #PROT g14164.t1 g14164 MMGGTVESSDESGDPSTAHSIPNVNTVTEQTAVLSVGSSDAVSPTKAGPIESETPPEQSDGAPPSVGNEPSVVVAEGSMAISQAQQPSAEEQLLQQQPTTQQPTSHQHLPSEELQQSPDIYAVKRIPWSGRTVGIVTQNINGPCPLIAICNVLALRGQIQLHADMELVSYQHLCTALGDCLMRAASAPTTDAEHTGESEADRARNVEDCFNSFPKLQTGLDVNVRFSSVEGFEFTSECLVFDLLNIRLVHGWLPDPQDADSFAVISKTSYNQLVERVISYRSLATDKGKGAEDPANDADRILQEGIIAEAFLEQSASQLTYHGIAELASSLRPNQPCVLFRNNHFSTLLKHRDELMILATDQGFLHSPAVWETVANVEGDGVFLDGEFHNIPPASSDDYRAAAAPATVAEASAQNADYLLALSLQRQEDEAERQSAQQQPQQQHQQSRPTSASDRGPASHTPSQRSLSGNATSAQTASTASMDPDYLLALQLQEEDDRRAREDQRARQQQQQPQQQSQQQQRQQQRSASGGQGTAPVQSVQTAQGADDAEVKKSSNCVVS* # PASA_UPDATE: g14166.t1, single gene model update, valid-1, status:[pasa:asmbl_6940,status:3], valid-1 NODE_408_length_24391_cov_43.0764 . gene 21948 23710 . + . ID=g14166;Name=g14166.t1 NODE_408_length_24391_cov_43.0764 . mRNA 21948 23710 . + . ID=g14166.t1;Parent=g14166;Name=g14166.t1 NODE_408_length_24391_cov_43.0764 . five_prime_UTR 21948 21987 . + . ID=g14166.t1.utr5p1;Parent=g14166.t1 NODE_408_length_24391_cov_43.0764 . exon 21948 23710 . + . ID=g14166.t1.exon1;Parent=g14166.t1 NODE_408_length_24391_cov_43.0764 . CDS 21988 23631 . + 0 ID=cds.g14166.t1;Parent=g14166.t1 NODE_408_length_24391_cov_43.0764 . three_prime_UTR 23632 23710 . + . ID=g14166.t1.utr3p1;Parent=g14166.t1 #PROT g14166.t1 g14166 MLNIMDDDRFLGDAHSRNCIYDAIDVAIESHAFQCAWTDERSDIRDNFVGRIDALFASTAAVFDCSASDKRSPSMNVAQPLIPESSLTQGSSALEWISRLSAFRPVAFGSAVNAFGESSSDIDVCLIPRVSDVRLLADALSCTSKNKLKIMDKEFIRRVEELLNRSPESFGNVTAVFGSVFVVKVADLSSGLSCDLTRWLPTPTKRVVVSPTTDGVMGMDAATNAMTGTRDPPVSDATEYACCTNVECRVPVVRNTMLFRRYSSQGVRGACTVRIYHAIKRWARVCRVSGNYHGYPSNYAFLTMLVAYLVNHGGDCVVPKRAAFLDRVDGESLCYAIERHLLSGRTHASVSTTGLAGHSQGTHVVHFDDTDEPLPKRFRADGADAQPVDNRDNCCNINTSNDNSSERSAESLVECASARLLHGFFRHYAGEDGCAFEPSVSVITLLDATVERAPFFASTSHEHSAAFSSALAISIATSTVETLPPSPADLALRDALSWRMVVQDPLLHTVDLGRKIASREHQMRLMAALREGARDMTSSRVPHWLAD* # ORIGINAL: g14165.t1 original gene structure, not modified by PASA NODE_408_length_24391_cov_43.0764 AUGUSTUS gene 19077 20842 . + . ID=g14165;Name=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS mRNA 19077 20842 . + . ID=g14165.t1;Parent=g14165;Name=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 19077 19244 . + . ID=g14165.t1.exon1;Parent=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 19077 19244 . + 0 ID=cds.g14165.t1;Parent=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 19743 20348 . + . ID=g14165.t1.exon2;Parent=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 19743 20348 . + 0 ID=cds.g14165.t1;Parent=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 20666 20842 . + . ID=g14165.t1.exon3;Parent=g14165.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 20666 20842 . + 0 ID=cds.g14165.t1;Parent=g14165.t1 #PROT g14165.t1 g14165 MASRAVVVMLAAAIIILLSFTNVAQAATFSVIVGPVGPIRFRPHPSPSNVGDTVTWPHCAIGQQAQVIVKAPEDPSSSISVLAARATASVSAIEYQAALVSAASAVSVAQVAATASASSYEAAASHVSVESVAEAAATASASSYQIAASISAAIASSAAAAANPSFDGVHGGKFDLTCVSTAQLFDGDAHIVQGPGNADFKCKTIKDDAATLLTCGGRYIMFRPTNGDADLSLSFELKTTIDDANFITARIEGNGHAHVSFSTDEAGMNVVGTEIVESKGPGAGAAGGEYVSGSAHTGSIVCRASVVQMYLKPTDR* # ORIGINAL: g14163.t1 original gene structure, not modified by PASA NODE_408_length_24391_cov_43.0764 AUGUSTUS gene 1279 13849 . + . ID=g14163;Name=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS mRNA 1279 13849 . + . ID=g14163.t1;Parent=g14163;Name=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 1279 2117 . + . ID=g14163.t1.exon1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 1279 2117 . + 0 ID=cds.g14163.t1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 2331 2471 . + . ID=g14163.t1.exon2;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 2331 2471 . + 1 ID=cds.g14163.t1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 2715 9416 . + . ID=g14163.t1.exon3;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 2715 9416 . + 1 ID=cds.g14163.t1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 9757 9824 . + . ID=g14163.t1.exon4;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 9757 9824 . + 1 ID=cds.g14163.t1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 10039 10163 . + . ID=g14163.t1.exon5;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 10039 10163 . + 2 ID=cds.g14163.t1;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS exon 10385 13849 . + . ID=g14163.t1.exon6;Parent=g14163.t1 NODE_408_length_24391_cov_43.0764 AUGUSTUS CDS 10385 13849 . + 0 ID=cds.g14163.t1;Parent=g14163.t1 #PROT g14163.t1 g14163 MAGLAAALAEHGLAATEEGDTEDWNAAPVIASSLLDTHGFVVQAARTDGYAVVVDARRAKGDQKDHRCTIKTTSDSSLVPLLRSEYEFLMRIKSPNVVRPLELLAIEPNLLAIVFDATPHISLRELIHRNGRFAIRAFVAAAKQICAAVQATHDAKICHYDLSSHNLLVEHGGENDGHVLLTNFHNAEFMRAGGRLVMASVNQSSALGVSSGRPSVLTSPRDSRAGGEFLQQDDFEGVLAQPKSLDYLAPERTRRVKREPDYRADLYSMGAVFYEMLAGRPPFLGDAYAIVHAHIALVPDSLHSTNGVPVFIDRIIQKLLRKDPDERYQSGRGVLADLELFESKGFNALLSTAIAQMDVPYRLPMPSELFGRTSEQKKICDAVSDAFTSQVARVVMLDGPSGVGKSSLVRAACADFTGKCTYAEGKYDQYGAGRPFSAIVDILALMTGQLIAKTTRSGGTALLVTLRNAVGKNASALCQLHPAMASLFGRLARRSSSGLSASGGSEPLLPPFSGERASGNDCAPPGSVIVSGDTLSILVHPPIQGQANSLKNTLSATGSSSNLGGGGGSTSNQGNLMVRLQQAFCSLLKALASCNCPALLVLDDLQWADASSLRLLQHAALQTDCPFALVATYRTSEITPSHPLHQIISSSSLAGSGRLLQLSLGSLTVEDVTALIARSTALPLRVVSDLATIVHNKTAGNPFFIGHFLSALQDDGLLFFDPARHRWAWKLADIKSCEHTENVVDFIVDRSSRALGLREETQALLKYAAVIGCRFTLDGVAALAHVSEDDAHARLQDALAEGLVMRLAAHEDRAAANRTASGLTISKRRSGRELVASLSNAMEDVGPDGLFRPFNVPEDKKLRVSRSYAGLSRSQAVSLESAEATEESFEQSRVFAFVHDRVQQAFYQLLSEEQKTLVHFDLAKILLASSLLPDSHASPRSRTMPATAVRPERRPSDSGVLPAKRTSTDSRRRSTGATTNSSTSSSLGADDSERVFAIAGHLLRCGVHAEKLPDLAAMQLANAGTLAVNAAAYDEALKYFNRAKSLLPLCSEASRERHTFTLYFNQPACLYFLGHHYAASKGLEEARVIAGNNHSLVVPVMLLQISVYTAMARYSDAMSVGLDCLDILGCEMPVNIDAEAVAAEIESIDDVIVERDLAELVAESAMDKGLFPSSEMWRVQALDTALMELIPVALLLGDINAYVLFSARVTALAFARGHTVASSGGMCVYGFTLAGVLGRHRLGCQVVQVGTKLAETYGDAAHLGRSYLHAGLAMPWGESFDASIAALKKALAHSSEAADQNYRVLVCVFLTWTNFIRGTPLAAQATQLGIHAGLVTASGQRDMMRAIGAVRGVVEELTGVKIGYDGMPSAAGGGGGSGGAAAANSDDADDGNEYTPFANAAVGLFRTLGHVVFGRDDRAFAVYSRLVEENTMEHVRGLITHHEFDFVGAIAAARKCRRIVDKYRDPNNPAHSISFAVPSDSNPASSTSGAAASSSTSGASPSGDEDTPLASFISAAGRSSTGESRQIPLPPDVAAQVADLMSKVKNHVTKLEDCSQASRRNYFSKCMLARAEAKRLEGRYGDALAAYGQAARLARDEMFWHVAALAYEGAADLLIAGGMVDLASPVLLEAATAYTTWGATVKVDELYRRYPELHRGRKARAATSATGMPRAHTESMSQKTSATGAPGGSSIDLVALFRAARALSEEMEFDKLQTVLLDIIAQNCGADHAALVLVRDEPPEPATPLRRSDSAQGGRYPSRPSSRLRTESVDEVEEPCEREPVRAPPRSPTMQQAPRRRMAGRVSPMMASVSEPVQAVQPPPQMEALHMQQVMQMQQAQQVQQAAPLSPRQISLPRQQQSPRESELRAPESPPPPQHPLRVEQPQPAQQQQQQQQQLQVDLQSRNSIDSIESRETRPSLAPQGRVQRVRATSELPPCIDRQPLSPLLPRGVLLKQLNVDGHLDGGDGNSSSNNRSSLPNVGSAPKVESPIVKRRRGGSVGGAMKPSLAIDFGRRTSLGALTSPRLTANLYIAARFTEGICSCEDEPVDRHPHVSAAIIGYVAGTRESLLIEDTRRPMVIGEDPHVVRAGVACAMCVPLQRGGEFQGALYLENRRTPHAFNADRLWILELLSKQVAVSLKNAALFRSMKAARDEMVVARNFSESILRSTRDPMLVLDSNLRCVTANRAFLKMFYMTDSEVRGRSIYELAGGQFGSNERLKRSVDAILRCGEPFKDVEVKITTSNQNMLTGSSMGTDDLQMSLASAMFAAIGGQTASAANSVQAFDLIVAGSQVRTAAGLSHSSHVGSWGLGLSNAPSLIEVHSPPGSDSDDGSFGDGNRVIILTMENVTHAKRALELRRTAGDLRRMIDGASVPIFGIDMSGSVVEWNERMRWVSGIRKDHAIGSPLASFLLFSESNPNPARFVSELVDSVAEGNAPNGIELSFRTNRGEGADLLVNVSPRMSGEGELVGVMMVGQDVSDKKHSESVLRQGLVASLTAFVPRSVAERYSRNPNLPLRSPACEYIEGAVLFADISDFTTYTEGMVRDLTDGAEKIAMFLDGVFDSLIPIISANGGDVIKFAGDAIAAVFPCTAKRNLVATTLQAIQCSITLVRAVKRIIMMRGFSCRLKVGIGAGQTTIVHIGSGGCWQQVFVGPAVAQMARSEKVAKPNQVLISPEAKALLPDGACDLEPVYAGTHAADGDGTASHAPPVVAYIVERMVGAELDPHPLPAPRLSSSMEAALKAYVPVQVYNYVHENKTEWLTDLRSITVVFMNIGGIDFSKGFSNRRLGASDFSASTPAASALPNPQRRMSLGVPFYAASNARGRMDMDDTELSFFEASEGDDPVLDTARKLSDAFDVIRSGVDAFEGSISKFLVDDKGLVAHLAFGLPQKTHSDDVTRAVLTCTRVVSQLEKRGFRARAGVATGTAFCGSVGSQDRKEYTHHSDIVNCAARLMVVSDWGRVLCDEATVDAAIIDNVEFEPKRELKLKGKELVLTASYVKAAREGKRGYIAHTHAVLASLAKMRRRRASSVEEEPADGDESSAPDPFPSNNTQMMGREILLSDLIEASDLFASSMTPTFSAIFLTGEGGIHGIGKTRLLAEAHQQISLDDRIRETGVFICNYAFSRIGNARPLEMWVGLYEALVGRKGRDAIETARNDLIAGKDGRLAALMPLISDLFSHGRARDYFFAPPAGGSSTHAQSHHGRLNPGAPLGSPGNSGEDSLSDDEEDALRQGVSSSMSIPARLAASVKILCKLLTRRLRSLHKGVIIFVDDADFFDEHSVSVLEHLYSANLHALMICAVRSSSSPMASFERMPKSPWMETMVLSRLTREEMSPSVRERILSHLRARHPPTGTAGFSRRDSRKGDKRGGAHGRQNAHANADSATTTTVYDGIASEDVQAAELAIARIVERSSGVPLVAHLLTLTFLKHFDDEKAQKAATPLEADEDSAPTRTSSVEGASNGAALPAPALLPLRVTSIGADSGVSSPLSQSLQSLRTNSSSLSDSDGLTASKAPASLLVSLLGELNLIRPHFASRIDRLTPSQQVTLKIASVIGDSFGVDLLVHMTSSFERGGIQVIDDLDNLVASGFLVPGGDAPSHPHLKASDSSSSLLAPTDTGPAGRSPLAVHSNSSLASASHHSIDPLASSGGLRPSGSTEYYDMYTFAEQSIRETAYDMVLHRLRRRLHRDAALWYERVYGTHRMSREMLSTVAWHWQHADELRKYLEYLALAGAVSSRELGSWLEEDERIEAEIRRLEEARIMLVEKMKRKQGQARRRSSDALLL* # PASA_UPDATE: g9954.t1, single gene model update, valid-1, status:[pasa:asmbl_6640,status:12],[pasa:asmbl_6641,status:12], valid-1 NODE_3844_length_2640_cov_41.7037 . gene 1065 2437 . - . ID=g9954;Name=g9954.t1 NODE_3844_length_2640_cov_41.7037 . mRNA 1065 2437 . - . ID=g9954.t1;Parent=g9954;Name=g9954.t1 NODE_3844_length_2640_cov_41.7037 . five_prime_UTR 2398 2437 . - . ID=g9954.t1.utr5p1;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . exon 2183 2437 . - . ID=g9954.t1.exon1;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . CDS 2183 2397 . - 0 ID=cds.g9954.t1;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . exon 1936 2065 . - . ID=g9954.t1.exon2;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . CDS 1936 2065 . - 1 ID=cds.g9954.t1;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . exon 1065 1724 . - . ID=g9954.t1.exon3;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . CDS 1365 1724 . - 0 ID=cds.g9954.t1;Parent=g9954.t1 NODE_3844_length_2640_cov_41.7037 . three_prime_UTR 1065 1364 . - . ID=g9954.t1.utr3p1;Parent=g9954.t1 #PROT g9954.t1 g9954 MARSLVSVAVVVALAAVVCTAAPLNNAYEFMLLVQQWPAGVCQTNLEHPCAIPTGVDSWTMHGMWPSRNDTTYPQNCNSKLPYNKNAITPIRSEMEVGWTNLFTDSPDDSFWSHEWTRHGTCSLDIVKGEEEYFAAALNLRKSHDYGHVLASNGVPPSSSNTYSVNDIVVAIRKGFGADPLLWCAYHKGKGQYLIQLGLCFDKGLSTAFMCDERVYDTGSCDDKQPIYYWPVQH* # ORIGINAL: g9953.t1 original gene structure, not modified by PASA NODE_3844_length_2640_cov_41.7037 AUGUSTUS gene 96 409 . + . ID=g9953;Name=g9953.t1 NODE_3844_length_2640_cov_41.7037 AUGUSTUS mRNA 96 409 . + . ID=g9953.t1;Parent=g9953;Name=g9953.t1 NODE_3844_length_2640_cov_41.7037 AUGUSTUS exon 96 409 . + . ID=g9953.t1.exon1;Parent=g9953.t1 NODE_3844_length_2640_cov_41.7037 AUGUSTUS CDS 96 409 . + 2 ID=cds.g9953.t1;Parent=g9953.t1 #PROT g9953.t1 g9953 VHTRHMACSASPRRSTASRSSGQCSTERASATLAMRPNSTMSSCTATPTHSSSPPLLSRATLFLPFSLHRRTPMPCVRRLCLRQTRCSLPPTSARVRSTGRLAS # ORIGINAL: g14461.t1 original gene structure, not modified by PASA NODE_246_length_29382_cov_44.292 AUGUSTUS gene 14126 16385 . - . ID=g14461;Name=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS mRNA 14126 16385 . - . ID=g14461.t1;Parent=g14461;Name=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 15577 16385 . - . ID=g14461.t1.exon1;Parent=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 15577 16385 . - 0 ID=cds.g14461.t1;Parent=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 14904 15445 . - . ID=g14461.t1.exon2;Parent=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 14904 15445 . - 1 ID=cds.g14461.t1;Parent=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 14126 14664 . - . ID=g14461.t1.exon3;Parent=g14461.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 14126 14664 . - 2 ID=cds.g14461.t1;Parent=g14461.t1 #PROT g14461.t1 g14461 MATLPRGPAASAPTVPSEAQLTAEYEALLSEIGSLQIAKPPPTVAPLVRPSPTTKNTPASQSDVQQENVPPGSAAVATSAPSCALKSTTIALGASADARPAKKEITTNAVPKSAKEGPFVGVDSNAKSWQQWRDAQEKEKGRRRSGEKDEANAKPAEETPAVQPDSAADAEPRYVFGEKFQFKLGGTPAAPDSAATQGGSTAGHIVVISPIGSTGGNAAAASAEGAQNKQASVVNATEPTATLAHANTTLLSTNNAGRSAVDVRPVDVAGPRNSVAPRPQQQQQQQQQQQQQQKQQQRVQSQSRSSRESTPTPDELHSRPLSTPSPHGAASVSPSASVHFGTPAGFFPSNAQSSPQYASPVSSAIEMQIPPQYHASGQHSAHAHPPHAYTQQQQYRGGAQMHSHTAGGAPPRHYGKVAVLDTNVLLDDGDFSALGNVGSLADIVIIVPFIVLSELDGLKMGTSGTAFKARRALAFLRTHFDARAHWLRGQTSEESRIALWMLHGSLERPPADDLILACAHAMQMSLCGTDGNGNGNPVDAVVLLTRDTNLAVKSSVYGLVATVTAEWVGSHLRRAEIHRQIRLQMTAAQAVEQAMWGASSARSGSPAVVAKDDSILQTHAQDMRDRRRS* # ORIGINAL: g14458.t1 original gene structure, not modified by PASA NODE_246_length_29382_cov_44.292 AUGUSTUS gene 7470 8477 . + . ID=g14458;Name=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS mRNA 7470 8477 . + . ID=g14458.t1;Parent=g14458;Name=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 7470 7550 . + . ID=g14458.t1.exon1;Parent=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 7470 7550 . + 0 ID=cds.g14458.t1;Parent=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 7708 8089 . + . ID=g14458.t1.exon2;Parent=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 7708 8089 . + 0 ID=cds.g14458.t1;Parent=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 8314 8477 . + . ID=g14458.t1.exon3;Parent=g14458.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 8314 8477 . + 2 ID=cds.g14458.t1;Parent=g14458.t1 #PROT g14458.t1 g14458 MELDFTSDLFDPLKALYAKNIVLPYPQVKALDNLSRFAKLLFPQDPTTNNSSRPAEAAAGAHVTRRQSEDGALSRRCPFDARSSESKNSVSVVRPNDGTPISDDGERKIQHGADAEARERVLNDGGGGDGNGAGSTLPARRPRGHIKSILERMEDADGPLGFLHYALMEKRRVCVHMKHGGSRRGVRGRLTGFLIAFDKHMNMVNLRC* # ORIGINAL: g14459.t1 original gene structure, not modified by PASA NODE_246_length_29382_cov_44.292 AUGUSTUS gene 8585 9181 . + . ID=g14459;Name=g14459.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS mRNA 8585 9181 . + . ID=g14459.t1;Parent=g14459;Name=g14459.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 8585 9181 . + . ID=g14459.t1.exon1;Parent=g14459.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 8585 9181 . + 0 ID=cds.g14459.t1;Parent=g14459.t1 #PROT g14459.t1 g14459 MDVEEKYTEYLRVPKTKHMKLPAASSTPHPSVDIASMCDASCGDAGVIPAFTDGAVNACSRAEREATSGVVSVTSAGVRSSILDGAIITDLVPAHAVHVATDVSVASTRDLASTATAVDGSGASTNTNARYDGNSVHLTNDKGVVTNNTEIGLIGSKRKRSGKTRGPKMRQIAVERSRRVGQLLVRGECVALVSLDGS* # PASA_UPDATE: g14466.t1, single gene model update, valid-1, status:[pasa:asmbl_4382,status:12], valid-1 NODE_246_length_29382_cov_44.292 . gene 26233 28956 . - . ID=g14466;Name=g14466.t1 NODE_246_length_29382_cov_44.292 . mRNA 26233 28956 . - . ID=g14466.t1;Parent=g14466;Name=g14466.t1 NODE_246_length_29382_cov_44.292 . exon 28726 28956 . - . ID=g14466.t1.exon1;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . CDS 28726 28956 . - 0 ID=cds.g14466.t1;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . exon 28350 28539 . - . ID=g14466.t1.exon2;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . CDS 28350 28539 . - 0 ID=cds.g14466.t1;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . exon 27853 28065 . - . ID=g14466.t1.exon3;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . CDS 27853 28065 . - 2 ID=cds.g14466.t1;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . exon 26233 27435 . - . ID=g14466.t1.exon4;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . CDS 26429 27435 . - 2 ID=cds.g14466.t1;Parent=g14466.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 26233 26428 . - . ID=g14466.t1.utr3p1;Parent=g14466.t1 #PROT g14466.t1 g14466 MRGYSWYNAGRLMHKSTAAEDFARVADYLSGAESGTRWTDASRLAVYGFGVGGFLAGSMLSRWPTKAAVIVGDSPFLDVIGAMADPKRPWTVHNYGEWGDPVGAGADDSSSRAVYFYQKTYDPYFLCGSHHEHPTVLLHAGKDDHEVGFGHAAKMIAKLRSHSSGRRRADGGSAVMALQVIDGGFDGESGSAVGRAMAYKQAFILDSVARDALCASALTPTSCSAMSYCVGCNQPSGDFECLLGPTCPGAAVTTTVTSAVASSTHDSHVASASQTHDSVHLTTHSYVTSESASASVTVPSHATSEISVKSSNTTAAPVPSPVTHSARSVASSSSSSSLAAVASSIAPPVANASSSSAAEPRVTSSAAESHVTHPASTVEGSSSGAVPDATSSDHAVASSAAVTAIPSVATPSAAPLVTPSDGVVVHRPHVDDPTGALIGFSSIFACVIVATTVYGIYLRRRRQNAAEAGVQGFADFDRLRFEESGGGSSAGGQYRPGSARESASSGSASRNPFAGRGSRSKGNRPDATAMFGIDEDDDELIGMDER* # PASA_UPDATE: g14464.t1, single gene model update, valid-1, status:[pasa:asmbl_4377,status:3], valid-1 NODE_246_length_29382_cov_44.292 . gene 21955 22917 . + . ID=g14464;Name=g14464.t1 NODE_246_length_29382_cov_44.292 . mRNA 21955 22917 . + . ID=g14464.t1;Parent=g14464;Name=g14464.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 21955 21996 . + . ID=g14464.t1.utr5p1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . exon 21955 22031 . + . ID=g14464.t1.exon1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . CDS 21997 22031 . + 0 ID=cds.g14464.t1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . exon 22140 22320 . + . ID=g14464.t1.exon2;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . CDS 22140 22320 . + 1 ID=cds.g14464.t1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . exon 22450 22506 . + . ID=g14464.t1.exon3;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . CDS 22450 22506 . + 0 ID=cds.g14464.t1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . exon 22701 22917 . + . ID=g14464.t1.exon4;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . CDS 22701 22853 . + 0 ID=cds.g14464.t1;Parent=g14464.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 22854 22917 . + . ID=g14464.t1.utr3p1;Parent=g14464.t1 #PROT g14464.t1 g14464 MSSMKRAGMNYRDRIPNGSARSALFGGAGYDRVPKEDENSGEMLSERASTMYEQQNDALVGDLANKVSMLKSLTININDEVREHNKMLDEMQDDFGGVGGLLKGSMNRLSGLMKAGHNKHMCYLILFVVFVFFVIYYIVRR* # PASA_UPDATE: g14463.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4386,status:3], valid-1 # PASA_UPDATE: g14463.t1, single gene model update, valid-1, status:[pasa:asmbl_4385,status:3], valid-1 NODE_246_length_29382_cov_44.292 . gene 19597 21651 . - . ID=g14463;Name=g14463.t1 NODE_246_length_29382_cov_44.292 . mRNA 19597 21651 . - . ID=g14463.t1.1.5b6be70b;Parent=g14463;Name=g14463.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 21539 21651 . - . ID=g14463.t1.1.5b6be70b.utr5p1;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . exon 21436 21651 . - . ID=g14463.t1.1.5b6be70b.exon1;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . CDS 21436 21538 . - 0 ID=cds.g14463.t1.1.5b6be70b;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . exon 19597 21254 . - . ID=g14463.t1.1.5b6be70b.exon2;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . CDS 19993 21254 . - 2 ID=cds.g14463.t1.1.5b6be70b;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . three_prime_UTR 19597 19992 . - . ID=g14463.t1.1.5b6be70b.utr3p1;Parent=g14463.t1.1.5b6be70b NODE_246_length_29382_cov_44.292 . mRNA 19597 21651 . - . ID=g14463.t1;Parent=g14463;Name=g14463.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 21539 21651 . - . ID=g14463.t1.utr5p1;Parent=g14463.t1 NODE_246_length_29382_cov_44.292 . exon 21436 21651 . - . ID=g14463.t1.exon1;Parent=g14463.t1 NODE_246_length_29382_cov_44.292 . CDS 21436 21538 . - 0 ID=cds.g14463.t1;Parent=g14463.t1 NODE_246_length_29382_cov_44.292 . exon 19597 21269 . - . ID=g14463.t1.exon2;Parent=g14463.t1 NODE_246_length_29382_cov_44.292 . CDS 19993 21269 . - 2 ID=cds.g14463.t1;Parent=g14463.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 19597 19992 . - . ID=g14463.t1.utr3p1;Parent=g14463.t1 #PROT g14463.t1.1.5b6be70b g14463 MRAAVFVTVAALAIALLCAHDAAAAPVPASNGNPEAAAEIASEKAQVAQDAAEDAVNAEKDAAAKALEAAQKAEKDKETAEADADRAAKAEDDAKQAKADADKAEAAEAKAKAAESNAEQDAKEAIEAAAHATTEPEKAAADAAVTKANADVQAAEDAEKEAAAAAAAAEKAAEMKAEKAKSDKNLAKIEADLAEAAATAADSEQAEDEAAKEKAKEATAAAAEAEAEAEEAEEAVVEAEEEEDALGEETDEAEEEEDALGEETDETEDSGTPSDPSDGAAPADTVDDNVDGTEPDDATMGGDEEDSGDEGDNGDELTDDNVPADVSPGGDEDDADSGDDEEDEGGETLEGDEEGGESGQQLEDGEAVDAEGSADGDADAVGGDEVAEEDVEDPTAGGDRASGGGYGVITAVVFVILVGGSVFLFRKNLMHMVLKRRNTANGRYRYERLNTASG* #PROT g14463.t1 g14463 MRAAVFVTVAALAIALLCAHDAAAAPVPASNGNPGISAIEAAAEIASEKAQVAQDAAEDAVNAEKDAAAKALEAAQKAEKDKETAEADADRAAKAEDDAKQAKADADKAEAAEAKAKAAESNAEQDAKEAIEAAAHATTEPEKAAADAAVTKANADVQAAEDAEKEAAAAAAAAEKAAEMKAEKAKSDKNLAKIEADLAEAAATAADSEQAEDEAAKEKAKEATAAAAEAEAEAEEAEEAVVEAEEEEDALGEETDEAEEEEDALGEETDETEDSGTPSDPSDGAAPADTVDDNVDGTEPDDATMGGDEEDSGDEGDNGDELTDDNVPADVSPGGDEDDADSGDDEEDEGGETLEGDEEGGESGQQLEDGEAVDAEGSADGDADAVGGDEVAEEDVEDPTAGGDRASGGGYGVITAVVFVILVGGSVFLFRKNLMHMVLKRRNTANGRYRYERLNTASG* # PASA_UPDATE: g14456.t1, single gene model update, valid-1, status:[pasa:asmbl_4383,status:12], valid-1 NODE_246_length_29382_cov_44.292 . gene 60 1924 . - . ID=g14456;Name=g14456.t1 NODE_246_length_29382_cov_44.292 . mRNA 60 1924 . - . ID=g14456.t1;Parent=g14456;Name=g14456.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 1888 1924 . - . ID=g14456.t1.utr5p1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . exon 1768 1924 . - . ID=g14456.t1.exon1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . CDS 1768 1887 . - 0 ID=cds.g14456.t1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . exon 1023 1631 . - . ID=g14456.t1.exon2;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . CDS 1023 1631 . - 0 ID=cds.g14456.t1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . exon 600 736 . - . ID=g14456.t1.exon3;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . CDS 600 736 . - 0 ID=cds.g14456.t1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . exon 60 364 . - . ID=g14456.t1.exon4;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . CDS 151 364 . - 1 ID=cds.g14456.t1;Parent=g14456.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 60 150 . - . ID=g14456.t1.utr3p1;Parent=g14456.t1 #PROT g14456.t1 g14456 MALHGDSSAELSLRSCFLEGQRWQSEIENSDLSGSDPQYQAHVANAVAVLHKAQKLAQEVSLFSANEEVEDVATADLRYILIDAYLGDLVARRNITEPNARLALIEQSFRHYSAFVERCHQLRISSDADHATFKAAAEGQYANITRNDPAAERAAKINRFKREKEGKEKVRAITARMTEEARRAGTGDAALDEEVDRDLVRALIDVWVVRSIDAAISGWQECEILRHMAIGAPPSEEKRPARAPMKPFVLTRDMIQAGVFGAGYPSLPTMSFEAWAEREMANGTLPMQGSNVNQAPKEENSEDEEEETEEKLRKARAMDEWKDGMDALVSRDACLLPAVCCSLARPCPLRTVCGLWRAY* # PASA_UPDATE: g14462.t1, single gene model update, valid-1, status:[pasa:asmbl_4380,status:13],[pasa:asmbl_4384,status:12], valid-1 NODE_246_length_29382_cov_44.292 . gene 17110 19184 . - . ID=g14462;Name=g14462.t1 NODE_246_length_29382_cov_44.292 . mRNA 17110 19184 . - . ID=g14462.t1;Parent=g14462;Name=g14462.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 18824 19184 . - . ID=g14462.t1.utr5p1;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . exon 18654 19184 . - . ID=g14462.t1.exon1;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . CDS 18654 18823 . - 0 ID=cds.g14462.t1;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . exon 18266 18411 . - . ID=g14462.t1.exon2;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . CDS 18266 18411 . - 1 ID=cds.g14462.t1;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . exon 17110 17871 . - . ID=g14462.t1.exon3;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . CDS 17306 17871 . - 2 ID=cds.g14462.t1;Parent=g14462.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 17110 17305 . - . ID=g14462.t1.utr3p1;Parent=g14462.t1 #PROT g14462.t1 g14462 MSYDEFVRRRHSGDDRLSSYSHGGQGADTAGLRRPSQHNQPAADFDDYDEYDAETERQRAEVAEMMQRTEGIRDETLESTRNLARITAESERIGVETMEELERQNESLDRTNRNLDSIDSNARAAERHLTNMEKFLGLFTMPWNRQSNIERTSQYKAAYKTPAPEPAQSRAADATPVRKPSGASAASAADRNRLFGDGGNVGKEASGTRTFGDGGDVPSYKRGLNEVQAQKEGEIDSNMDAVGDSVRRLKALALGLGDQIDASNVKIDHITAKTEVSSMRVANAKARTAQLLK* # ORIGINAL: g14457.t1 original gene structure, not modified by PASA NODE_246_length_29382_cov_44.292 AUGUSTUS gene 2277 6441 . - . ID=g14457;Name=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS mRNA 2277 6441 . - . ID=g14457.t1;Parent=g14457;Name=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 4505 6441 . - . ID=g14457.t1.exon1;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 4505 6441 . - 0 ID=cds.g14457.t1;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 3851 4054 . - . ID=g14457.t1.exon2;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 3851 4054 . - 1 ID=cds.g14457.t1;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 3126 3559 . - . ID=g14457.t1.exon3;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 3126 3559 . - 1 ID=cds.g14457.t1;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 2277 2875 . - . ID=g14457.t1.exon4;Parent=g14457.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 2277 2875 . - 2 ID=cds.g14457.t1;Parent=g14457.t1 #PROT g14457.t1 g14457 MGDAPARQKMATVAMSDVARNNNSSSIRSNSKSDNNSNTGAMYSVDLMPRNLSMHSTVFPHRVVFLIDAASVYFSAGLARSAQRNPSNTDSRTAEEKDSEDELHNVIADVREFVVKTVAAFEFGDALVDLAVGSTAAPRVQWGFSVIAGSGDHAMRRCRLHSSDTVSEFDNLVAALFRACTQIAEDARTHAHGNDGSTRNPQHPHTQPSNNKSVAPPHQSRRPIPPAERIGRALRGALSDFDWSGGADLLSPVRDHPGRKGGLSALTHTQAITAHAPNAVFVLAAGPRSAEELAAFVGTDTVEGKVPRAWGAPPARDAHPKNASARLKELLLSSGALVDMYAKAELVTHWADVRVDNPPPSREPSGRTLSLVGESAISSTVKALGGVVLQLRSVLCMADAVPFGHVVAAAMSSGSAPVGCREWALMSRAAQSGLGAASAAGLAAAITAHQQTDPVSGHVLVPLDVAENDDDSADDATGLRAFSSLLTAPSVAVALATRAVSLTPARTECDVDRTQRILAMAASMVRDSNAAVASALDSAIHAEANGGGEETHTVGHATRVVSKATAEEIFARLSAACEEFVAVGQTGRPRDFASAALRSAVEALSAGSGMSAEDSAAAVTGHVRKAILIAPRSLSGAVQGRDRQRERLLQAILRLELGAGLSPAGRTETPSTLDPLPTAAIKEIAACFFAMSFASAVEGASAFGRLVADELAGGYRLRLPQTVAEIYNQLELGRVPAEGGLPAQSEPDTPIVTTRTKRRVEPRARSRDNVADGSGLIANAAATAHTQAQSRGGALHRRPIFLLNGPSGAGNRKKSDKQRTAGVEAGAGVEGGARPNKASAGSAERRKRKPTKCLFADLSAGVEKRRSPRIADKAVSRRPMPPPGCTDGASVHVAETPNLRRTSGPNAGGRTASSAGAANFVGVKDTPIGKQGVKDTPVVKREATDSANIKQDDVSDRSSKGKRPRDTPAPRPPRDFEPTIFSRSGGVPPSSGDVPVTGIAADTGALTGTSAEHMGVGVGVTASGSPIFAPMAAPKRTRSADDDGANGGRRVRRNLQL* # PASA_UPDATE: g14460.t1, single gene model update, valid-1, status:[pasa:asmbl_4378,status:12],[pasa:asmbl_4379,status:12], valid-1 NODE_246_length_29382_cov_44.292 . gene 9571 12829 . - . ID=g14460;Name=g14460.t1 NODE_246_length_29382_cov_44.292 . mRNA 9571 12829 . - . ID=g14460.t1;Parent=g14460;Name=g14460.t1 NODE_246_length_29382_cov_44.292 . five_prime_UTR 12668 12829 . - . ID=g14460.t1.utr5p1;Parent=g14460.t1 NODE_246_length_29382_cov_44.292 . exon 9571 12829 . - . ID=g14460.t1.exon1;Parent=g14460.t1 NODE_246_length_29382_cov_44.292 . CDS 9740 12667 . - 0 ID=cds.g14460.t1;Parent=g14460.t1 NODE_246_length_29382_cov_44.292 . three_prime_UTR 9571 9739 . - . ID=g14460.t1.utr3p1;Parent=g14460.t1 #PROT g14460.t1 g14460 MVLPSPTPSMLAPCRDGFVYLRNASTCLPCVSVQKAVIGSFCNGTDDIYPCEKGSFCPSVDRWLPCPKGSICRRGAFEPYTCFGGALSCPEGGLGECANVLATTIVFAVFFIGVWLVFHGIISFMEAQKNRLSSLRFEITSQTIHDFTIVFPYAMRWRRKTLTARKTNKMKERTVKPLTPEAERRLSTISATSPNQVQPNADRRPSTSVSMHKTIQPNTDERRPSISSIRISDSERQWRKSLQNISGKVRAVQIAAVTADAFSDIPHTRAFKHALRRLHEPPASMNIDLDEVSVAADHAHAAKLRNDITGNERPVVKEVSCTIRAGKFTAIMGPSGCGKSTLLKALAAAGEGPVFVAGGITYGGEARPLSKPLPDMCFMPQESVIYPDLTADETVHYARLLSKGPYMSVVDSEVDNTPSDMTDELVDEVLDVLGLGGVRGRVVGAEDGAKGERSAVSGGQRRRIVLAMEIVKRPSTLLLDEPTSGLDSTSTLVVMKALRDLANNGTTVIAVIHQPGYRVFKMVDDLVLLTGQGTLAYNGEAAGVLPYLEDVGYPRPIHASIPEFALDVAVGLARRKGIKKPDGAALAGQLLADKWKLVAPERRAIFKQTGVRRMSEAQKKSLTGIAPPMFAKVKEGDESEPVGVVNTELVAMEAERKFYEMTNSKRRGDTHLRQFAIVTLRTVLQLARGRKVLLIDGMLMVLMSLAINLIYGDLAPFDQASQHSALGLTLGLTGVIVGLRIFGADRHVYQKEKAAGILPIPYYLGKIIGSLPLVFVNPFILALSFCLIVSPRAPLAEYFVAFLLTQWAAMSIGVLASLLFRRKIALPVSVLYILIAFLCNSVTQKEKELEDKLGSFGTFLSRVSLLSYGTKALMFSELTRYPPVWAQGVTNAMSMIGFRVPQPGPFYPAGDFTPAGKAWRDLCVSLFLFALIAHIVGGICIYLSSFESLDSAALSERLRAFCGRRRRPQKVAPAV* # ORIGINAL: g14465.t1 original gene structure, not modified by PASA NODE_246_length_29382_cov_44.292 AUGUSTUS gene 23668 25367 . + . ID=g14465;Name=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS mRNA 23668 25367 . + . ID=g14465.t1;Parent=g14465;Name=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 23668 23915 . + . ID=g14465.t1.exon1;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 23668 23915 . + 0 ID=cds.g14465.t1;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 24089 24181 . + . ID=g14465.t1.exon2;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 24089 24181 . + 1 ID=cds.g14465.t1;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 24446 24521 . + . ID=g14465.t1.exon3;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 24446 24521 . + 1 ID=cds.g14465.t1;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 24853 25035 . + . ID=g14465.t1.exon4;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 24853 25035 . + 0 ID=cds.g14465.t1;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS exon 25254 25367 . + . ID=g14465.t1.exon5;Parent=g14465.t1 NODE_246_length_29382_cov_44.292 AUGUSTUS CDS 25254 25367 . + 0 ID=cds.g14465.t1;Parent=g14465.t1 #PROT g14465.t1 g14465 MAHHFSREVDIALPDGIALKGDLHVPANASGMVLFAHGSGSSRKSGRNQYVARRLNDDGIATFLFDLLTAEEERIDNYTRHLRFDIHLLATRLANTTVWLEHLNAEITSAVEVRHLLPGYFGASTGGAAAIVAASMLPDKVVCVVSRGGRPDLAGDALRRIQCNTLLVVGGLDYDVIELNREAKTRMESGRDPAMVHKAQVDMKIIPGATHLFEEPGTLERVADVASEFFVREFSKA* # PASA_UPDATE: g10923.t1, single gene model update, valid-1, status:[pasa:asmbl_7561,status:12], valid-1 NODE_4719_length_1298_cov_30.0679 . gene 72 1074 . + . ID=g10923;Name=g10923.t1 NODE_4719_length_1298_cov_30.0679 . mRNA 72 1074 . + . ID=g10923.t1;Parent=g10923;Name=g10923.t1 NODE_4719_length_1298_cov_30.0679 . five_prime_UTR 72 72 . + . ID=g10923.t1.utr5p1;Parent=g10923.t1 NODE_4719_length_1298_cov_30.0679 . exon 72 270 . + . ID=g10923.t1.exon1;Parent=g10923.t1 NODE_4719_length_1298_cov_30.0679 . CDS 73 270 . + 0 ID=cds.g10923.t1;Parent=g10923.t1;5_prime_partial=true NODE_4719_length_1298_cov_30.0679 . exon 493 666 . + . ID=g10923.t1.exon2;Parent=g10923.t1 NODE_4719_length_1298_cov_30.0679 . CDS 493 666 . + 0 ID=cds.g10923.t1;Parent=g10923.t1 NODE_4719_length_1298_cov_30.0679 . exon 1003 1074 . + . ID=g10923.t1.exon3;Parent=g10923.t1 NODE_4719_length_1298_cov_30.0679 . CDS 1003 1074 . + 0 ID=cds.g10923.t1;Parent=g10923.t1 #PROT g10923.t1 g10923 GLKNTGTITGDILFNGEERPRSFKRITGYVQQTNVLPSTLTVWETLYYTALLKLEEGLSDAAKRKRVDEVVALLGLGKCRETVIGSHLSRGISGGQAKRVTIGIELIHNPLILFLDEPTTGLDSATSYDVMKQVRKIADTGKRCAFP* # ORIGINAL: g13530.t1 original gene structure, not modified by PASA NODE_3018_length_4526_cov_38.4954 AUGUSTUS gene 206 4328 . + . ID=g13530;Name=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS mRNA 206 4328 . + . ID=g13530.t1;Parent=g13530;Name=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 206 297 . + . ID=g13530.t1.exon1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 206 297 . + 1 ID=cds.g13530.t1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 550 711 . + . ID=g13530.t1.exon2;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 550 711 . + 2 ID=cds.g13530.t1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 855 1075 . + . ID=g13530.t1.exon3;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 855 1075 . + 2 ID=cds.g13530.t1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 1399 3435 . + . ID=g13530.t1.exon4;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 1399 3435 . + 0 ID=cds.g13530.t1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 3573 3689 . + . ID=g13530.t1.exon5;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 3573 3689 . + 0 ID=cds.g13530.t1;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS exon 3984 4328 . + . ID=g13530.t1.exon6;Parent=g13530.t1 NODE_3018_length_4526_cov_38.4954 AUGUSTUS CDS 3984 4328 . + 0 ID=cds.g13530.t1;Parent=g13530.t1 #PROT g13530.t1 g13530 FAALSPVVDNYSVIRSLRVVRACRTINIVPGLRVIVDAIFNSLGPIVDVVVLIAAFMVIFAVVGMQLFMGVTRNACVDVTVFSNGSRLEKLLLDPHSGDFIYCGNHTRTQDCPGSSICFENAAPNPNYGYTSFDNFGAAVLAVIQVMTTDFWDDILWRIQSTAGLDYVLFFVPITCFGTFFLMNLFVAVVTSSYHREVSAARELSEIDRVLKAVHSAGSRSPTSSNGKSGGAISKKGQAKQSGSQQDSKRLAINEEACASAASTCPSSPAFSRRASVAPTDRANGIGTHAENDGSAVEEDDTSGGGERNKSKEGVETDGAATAVDFAEVPEPGAAEGSVSSHGDDAPVKRSAGSILARVSAPIVDHPLFNVLGILTVVANTVFMAMSHPYMSPTYADAVDIGNTVCVAVFAAELVLNLMRFEIRSYLSNKFNAFDALVVLLSFLDEITPGRMNVSVLRVLRLLRVLRLARKWRAMRNLIRTIGKAMDALGNLTIVLLIFMFLFSAVGMRLFADTYNVPADFVVEPLWNYNDFVQSFMCVFRMLCGQWIEMMYTTMHATTSAAAIYYLTVVIVGRFLILNLFIALLLDSFEEVAEETSGQSDNYGRRALTALRVKLWRALSRRMTSPAPPDGSEEPAATSFGVHMAADAGGGVGVGVNGASNGDATVRVGDNESGDGMGDGNRTPGGWTNESRHGSLGSIASPRVGRKSSTAALWSSRTSVGSTNSSSSNTQAERLAQLRPPLPDANWMRRFRYRMRCWLASPVVEAVTTFIVIASSVELAFEDASLRKDDAKRRAAETMSIVFAALFSVEVAVKIFAEGPVFYFLSPWNVLDAFVTAVTIATAAMPGKQGLSSLRVLRALRSLRPLRAIRKWEGMKVVIRAVIHTIPAIINVLLVCSVVWLIFGIIGVEFFGGKFGVCVDVTATPFDPDFLESLRNVYGTDRLACMSSDVNGTWVVPVANFDNIGNAFLILFQVCYPLWCCVVLYRLCRN* # PASA_UPDATE: g8624.t1, single gene model update, valid-1, status:[pasa:asmbl_5339,status:3], valid-1 NODE_2978_length_4619_cov_35.6802 . gene 375 1491 . + . ID=g8624;Name=g8624.t1 NODE_2978_length_4619_cov_35.6802 . mRNA 375 1491 . + . ID=g8624.t1;Parent=g8624;Name=g8624.t1 NODE_2978_length_4619_cov_35.6802 . five_prime_UTR 375 490 . + . ID=g8624.t1.utr5p1;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . exon 375 569 . + . ID=g8624.t1.exon1;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . CDS 491 569 . + 0 ID=cds.g8624.t1;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . exon 827 1028 . + . ID=g8624.t1.exon2;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . CDS 827 1028 . + 2 ID=cds.g8624.t1;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . exon 1248 1491 . + . ID=g8624.t1.exon3;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . CDS 1248 1296 . + 1 ID=cds.g8624.t1;Parent=g8624.t1 NODE_2978_length_4619_cov_35.6802 . three_prime_UTR 1297 1491 . + . ID=g8624.t1.utr3p1;Parent=g8624.t1 #PROT g8624.t1 g8624 MNTVRRVLAVATSHVHRRTIHASAQQFAAIGASVNKPQQQHKKTPSDAFPILLRPRCFSCGGIGHLTYDCTKKVPWAKWTAAIDVASVQDEFGRLQAAVAPRAEIPRKA* # PASA_UPDATE: g8625.t1, single gene model update, valid-1, status:[pasa:asmbl_5338,status:12], valid-1 NODE_2978_length_4619_cov_35.6802 . gene 1541 4187 . - . ID=g8625;Name=g8625.t1 NODE_2978_length_4619_cov_35.6802 . mRNA 1541 4187 . - . ID=g8625.t1;Parent=g8625;Name=g8625.t1 NODE_2978_length_4619_cov_35.6802 . five_prime_UTR 4058 4187 . - . ID=g8625.t1.utr5p1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . exon 3976 4187 . - . ID=g8625.t1.exon1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . CDS 3976 4057 . - 0 ID=cds.g8625.t1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . exon 2533 3617 . - . ID=g8625.t1.exon2;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . CDS 2533 3617 . - 2 ID=cds.g8625.t1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . exon 2177 2263 . - . ID=g8625.t1.exon3;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . CDS 2177 2263 . - 0 ID=cds.g8625.t1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . exon 1541 1946 . - . ID=g8625.t1.exon4;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . CDS 1761 1946 . - 0 ID=cds.g8625.t1;Parent=g8625.t1 NODE_2978_length_4619_cov_35.6802 . three_prime_UTR 1541 1760 . - . ID=g8625.t1.utr3p1;Parent=g8625.t1 #PROT g8625.t1 g8625 MGLIEWQFLRRDPGEIDTADETWLEDTEPRPSTIDSWARGAIPVKKPPPAPAQPPQTSRAEHGRNSINAGRPSRSSRQTSSSDLWNTPKSGSGSQSSAEGHRGKNSAGNGGTLVSVSESLMGSTAEQPEGAADGGELADTEDAPAASSSSRTKAVVSDAEAVAAASGSPTRSRTTKPLDGKPAAAGRQAQGPVRGALLRQSKEAREAAPLSSSGSGSSIPEKTSTSKGAHPPPHGDGPQHRGKVAGADHVPHHSKAPGLTPSNTMMQMTQPPASTVGFVHVVPAPPPARRDGLEGTIVGAMRFDPSKLPSYRVHTKAAIVDSAADSEAARIKAARARRRLMMAQQAQGAGGSAGGPTAIEGHVARSVALTDRAASYQDRVDERGGVPSLIESIQLAPGVTIREGDKVRRGPDVTFVAKPQDARTPRAAARVGVPAEQSSSALNSPSDEPMRVSKNGVIGAGARVKFGGEPLPPVPQQVS* # PASA_UPDATE: g12185.t1, single gene model update, valid-1, status:[pasa:asmbl_6254,status:12], valid-1 NODE_3589_length_3146_cov_35.2566 . gene 47 2998 . + . ID=g12185;Name=g12185.t1 NODE_3589_length_3146_cov_35.2566 . mRNA 47 2998 . + . ID=g12185.t1;Parent=g12185;Name=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 47 130 . + . ID=g12185.t1.exon1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 47 130 . + 0 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 522 650 . + . ID=g12185.t1.exon2;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 522 650 . + 0 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 802 890 . + . ID=g12185.t1.exon3;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 802 890 . + 0 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 1088 1172 . + . ID=g12185.t1.exon4;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 1088 1172 . + 1 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 1509 1593 . + . ID=g12185.t1.exon5;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 1509 1593 . + 0 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 1885 1967 . + . ID=g12185.t1.exon6;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 1885 1967 . + 2 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 2172 2371 . + . ID=g12185.t1.exon7;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 2172 2371 . + 0 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 2571 2681 . + . ID=g12185.t1.exon8;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 2571 2681 . + 1 ID=cds.g12185.t1;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . exon 2923 2998 . + . ID=g12185.t1.exon9;Parent=g12185.t1 NODE_3589_length_3146_cov_35.2566 . CDS 2923 2998 . + 1 ID=cds.g12185.t1;Parent=g12185.t1 #PROT g12185.t1 g12185 MRREAEEAATAYDRAKNNHMAKEKDVQKLQSKSELSADKAQQSNRSLGEQDAVCNRIQEDHFRVKMPHILEGFQNREVERCRFLLGCFTAIVELDTDRFARSSRTCDSLTSLVHSSDIHVDVEEYIREAGGGEHAGTVSVMSLLNPAKKGRMFVHKKGGGHVRWKEQFFVLMADQRALYFFDSEDSNKPRFKLAIPVGDRVVQHVDSSLFGRSNCFQIVIDRETHYFYVEEDSERHEWFSLIFDLTLDEGHRIARELSSRHVTSLQVKVIEGKKLVKTGDYYCIIGLDKDQQARTQTKLATTTPFWSEDFHFE* # ORIGINAL: g12837.t1 original gene structure, not modified by PASA NODE_490_length_22638_cov_41.6601 AUGUSTUS gene 3786 5443 . - . ID=g12837;Name=g12837.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS mRNA 3786 5443 . - . ID=g12837.t1;Parent=g12837;Name=g12837.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 4262 5443 . - . ID=g12837.t1.exon1;Parent=g12837.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 4262 5443 . - 0 ID=cds.g12837.t1;Parent=g12837.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 3786 4088 . - . ID=g12837.t1.exon2;Parent=g12837.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 3786 4088 . - 0 ID=cds.g12837.t1;Parent=g12837.t1 #PROT g12837.t1 g12837 MVHPTNNRPKYAHVFIDVSNIWIGGQRTSAAAKNLQTPIDPTWRFSARNFFSLVEKERNVVVHSRFLFGSEMRSSPRDNLWRRFQEDVDVVAVNFRSQYTRKEVDVDKSLTMSACRLADSLLYLAGIESAEDLERERGKRTFRTFAQIAMLDADNCTFTQVWDLAHHSVVILALGDGGFAHDAEEIVAVNGLPVEIWSWECTYSTLKFGGSCARGTPLTIKFLDAHLDEIGFTARFNIRSSRIPQASSFVFQRTNALVPRPIEAFLRTMRLPYYTHFEANGDLVVVIASLPTESTAECITDLIQRAKFEIGDESVMPYVQYIQQKRGPSVSPPTGRRNVFDILSSDDGSDEDATSTDSGMDSECDAVRGGAAEEAFHVIDYSKRQPQVKKGHHTGGCEYFHTEEERSFVQKNGPKRPHKIRMCNAYPNCQKPIHACNFAHGIEDLICPTCDGKGHAMEECARRFEPAPATRLLTRTRTPGFALHGAMQMPAMGY* # ORIGINAL: g12838.t1 original gene structure, not modified by PASA NODE_490_length_22638_cov_41.6601 AUGUSTUS gene 7048 9500 . + . ID=g12838;Name=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS mRNA 7048 9500 . + . ID=g12838.t1;Parent=g12838;Name=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 7048 7177 . + . ID=g12838.t1.exon1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 7048 7177 . + 0 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 7374 7504 . + . ID=g12838.t1.exon2;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 7374 7504 . + 2 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 7663 7902 . + . ID=g12838.t1.exon3;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 7663 7902 . + 0 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 8080 8169 . + . ID=g12838.t1.exon4;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 8080 8169 . + 0 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 8308 8429 . + . ID=g12838.t1.exon5;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 8308 8429 . + 0 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 8694 8780 . + . ID=g12838.t1.exon6;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 8694 8780 . + 1 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 8931 9071 . + . ID=g12838.t1.exon7;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 8931 9071 . + 1 ID=cds.g12838.t1;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 9404 9500 . + . ID=g12838.t1.exon8;Parent=g12838.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 9404 9500 . + 1 ID=cds.g12838.t1;Parent=g12838.t1 #PROT g12838.t1 g12838 MSQAALASSTLASVVHRKRTLIDLHAEMTIDDALQTLERANLTSAPVFDHAAGGYVAFVSVAEIISFIAFELFLPDDAERAPPEATMTQRIAIASQLSLRSAVVRGSNRAVRTYNGSSSIWDAIDGILSAGRILVRLDDDDDQGPADQQQGPFDLADARDAACIERLRATRRVLSETDVVRFMCERSHDFPEILSMEVRKLLCKKMTPCGDDVLCFAPDSQALAAYRAMLLHWQVHPRADSACIVNQKGAILTILSAADLRGMRISRVTELLQPVDAFLRGWPGGIVHRPPAVVTEQTTVGSAAMIAIVSQVHRVWVVDAHHRPRGVLSLGDIVEAVRLSSLTEE* # PASA_UPDATE: g12842.t1, single gene model update, valid-1, status:[pasa:asmbl_7714,status:12], valid-1 NODE_490_length_22638_cov_41.6601 . gene 19605 22225 . + . ID=g12842;Name=g12842.t1 NODE_490_length_22638_cov_41.6601 . mRNA 19605 22225 . + . ID=g12842.t1;Parent=g12842;Name=g12842.t1 NODE_490_length_22638_cov_41.6601 . five_prime_UTR 19605 19648 . + . ID=g12842.t1.utr5p1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . five_prime_UTR 19851 19857 . + . ID=g12842.t1.utr5p2;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 19605 19648 . + . ID=g12842.t1.exon1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 19851 19911 . + . ID=g12842.t1.exon2;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 19858 19911 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 20054 20215 . + . ID=g12842.t1.exon3;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 20054 20215 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 20461 20610 . + . ID=g12842.t1.exon4;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 20461 20610 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 20895 21071 . + . ID=g12842.t1.exon5;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 20895 21071 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 21196 21273 . + . ID=g12842.t1.exon6;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 21196 21273 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 21574 21729 . + . ID=g12842.t1.exon7;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 21574 21729 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . exon 22106 22225 . + . ID=g12842.t1.exon8;Parent=g12842.t1 NODE_490_length_22638_cov_41.6601 . CDS 22106 22225 . + 0 ID=cds.g12842.t1;Parent=g12842.t1 #PROT g12842.t1 g12842 MLSSVSRISRRGFHSSRAEAFKVAVLGAAGGIGQPLSLLCKQDPAIKHLALYDIANMPGVAADLSHINSPAKITAHQGPDSLAACVKDSDVIVIPAGVPRKPGMTRDDLFNTNASIVAKLAEACAKHAPKAFICIISNPVNSTVPITAEIYKKNGVYDPKRVFGVTTLDIVRANMFVAEAAGLDVASVEIPVIGGHAGVTILPLISREKRQKFSPEVIDKLTNRIANAGTEVVEAKAGAGSATLSMAYAGYRFTNSLLRAKRGDKNVVECAFVESKVNPEVPYFASPLRLGVSFHFPS* # ORIGINAL: g12841.t1 original gene structure, not modified by PASA NODE_490_length_22638_cov_41.6601 AUGUSTUS gene 18577 19211 . - . ID=g12841;Name=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS mRNA 18577 19211 . - . ID=g12841.t1;Parent=g12841;Name=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 19107 19211 . - . ID=g12841.t1.exon1;Parent=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 19107 19211 . - 0 ID=cds.g12841.t1;Parent=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 18838 18969 . - . ID=g12841.t1.exon2;Parent=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 18838 18969 . - 0 ID=cds.g12841.t1;Parent=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 18577 18747 . - . ID=g12841.t1.exon3;Parent=g12841.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 18577 18747 . - 0 ID=cds.g12841.t1;Parent=g12841.t1 #PROT g12841.t1 g12841 MKTVLALFVYGTLMYPEVIRKVIGRVPEFQSAVVEGYHRFKIDRREYPAIAPTEGASVSGFIVRVSQEEAAKLDHYEGHEYVKVAVACRTDVGVVEATAYAWALTESVDLLHGTWEPREFDLGDFVDNHVINVGK* # PASA_UPDATE: g12839.t1, single gene model update, valid-1, status:[pasa:asmbl_7713,status:12], valid-1 NODE_490_length_22638_cov_41.6601 . gene 9832 11047 . - . ID=g12839;Name=g12839.t1 NODE_490_length_22638_cov_41.6601 . mRNA 9832 11047 . - . ID=g12839.t1;Parent=g12839;Name=g12839.t1 NODE_490_length_22638_cov_41.6601 . five_prime_UTR 10947 11047 . - . ID=g12839.t1.utr5p1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . exon 10881 11047 . - . ID=g12839.t1.exon1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . CDS 10881 10946 . - 0 ID=cds.g12839.t1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . exon 10539 10684 . - . ID=g12839.t1.exon2;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . CDS 10539 10684 . - 0 ID=cds.g12839.t1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . exon 10298 10407 . - . ID=g12839.t1.exon3;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . CDS 10298 10407 . - 1 ID=cds.g12839.t1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . exon 9832 9913 . - . ID=g12839.t1.exon4;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . CDS 9900 9913 . - 2 ID=cds.g12839.t1;Parent=g12839.t1 NODE_490_length_22638_cov_41.6601 . three_prime_UTR 9832 9899 . - . ID=g12839.t1.utr3p1;Parent=g12839.t1 #PROT g12839.t1 g12839 MASELACTYAALILHDDDIQITADKITALVKAAGVDVEAFWPVLYAKALSGRNVGDLLANIGAAGPAPAAAAAAPAAAAAAGGAKEEKKEEKKKEEKAESEEGDMGFGLFD* # ORIGINAL: g12840.t1 original gene structure, not modified by PASA NODE_490_length_22638_cov_41.6601 AUGUSTUS gene 11517 18386 . + . ID=g12840;Name=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS mRNA 11517 18386 . + . ID=g12840.t1;Parent=g12840;Name=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 11517 12367 . + . ID=g12840.t1.exon1;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 11517 12367 . + 0 ID=cds.g12840.t1;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 12505 17565 . + . ID=g12840.t1.exon2;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 12505 17565 . + 1 ID=cds.g12840.t1;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 17788 17952 . + . ID=g12840.t1.exon3;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 17788 17952 . + 1 ID=cds.g12840.t1;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 18092 18386 . + . ID=g12840.t1.exon4;Parent=g12840.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 18092 18386 . + 1 ID=cds.g12840.t1;Parent=g12840.t1 #PROT g12840.t1 g12840 MASRERPSLSSSVAAHCGMGPGVLISRLCSEYDIRPAHLALARILNGTDAADAELDLAAIEAVAQCASLLDVVLSVVASLVVDRQTDDGENSMLHKQEATRVPVLDLAVRVLIPLMSVQRHPLGATTVSLAGSRGSGAWDACRRLQDTAIRIGVACVNFDPVDIEGRSMQSVGHLLRDACLLSLAQARDAPIHPEEIQHGGGNRTNRGVDVIAAIHFYGELLSSGGTQRQSQTGDRVPSCADFIEYDTLFNSMMNCLASPQRIVRLSCTARLVGPLLDTGITSGVAVSKRIECLSRVYDAAVSIASMDPQRGVNDAVSLLCVGLPYFLPKAPRVPTATNGSDNNKKSLKKTALSQAKNRKQRDLTDKVADAYGTQQGDHAAAQARQTLAEAAHRDACAAASAVDIRLRTELWALVIHAMASEDALARKRGMLILSRAVDLTGADMSWRSLPARGDAVGSPFKWPADASALTTWVADWTHYQLIFEVVADQNQFHLFEQLLPHLKMIVTRGGASGLIDPNWASLLLYRGLENDAPKIRHACLGVIVGVDVSSPGSGAGVGKWVPGAVAATRLPQEFVSGPFLRALKELSVFNSHRRFGMQLVRFLLEYSASLEDSSKDVSCAAVAASTTTAARVCRDAGLRFWRPYAEAARQTPDQPIAGDAVPLAQSSTRRCRFVRAVLHAVASETCDGVSLLYRTRFLADHPPLPAFGAHELEISRHLVEMSSTTTHTGIRCAVNANLMAGVARLVFVNADDLSDGQLKLSSFVATHAGVLKDQSDAVGIEPATFADLARVLAWIPLTECGMPGSPEWRDVRTRLLVLGRAPLEEGEWAWALLTRLIEVYIAGGVDGEASSAAAWSLQASRIARMLGLLAGTTEHTETGDRKNAAAHTPSAHCEGMHLREMERALHALAPLFDILERMYSHPYLANEKKMRAICLLTALKESLCVPKVWVHPTSFVGDSTPFMQSATLSDICASLDSVRPTAALRALLQLMGQRWALVSDEVCAYASRELLRPSNELEVSDDGECVDEAVVTAMSDGVAAMFALGWLSLSGAARGAPVHAARGLLQAALARMRPREERNDTRGYAMGVFGCLRCVHSALTLCRLLGKTDTGLSRAELAETLSLLLSANVHRKAAAAVEAEGSKGGFFSRFLLAKWEAILSAYGALVAFGDGDEDVDWLRALHDTAHAVVSSAADALESANALSVFPILASARIAQRHCLRPVIFPEAYANAHDGVSAVAAALSSGWRAVFEYRKDRCHTGAIAAFCVFAFSAYNMSCTALASVLRDVFHRILDMGNTRLGAVSPMAALVADFWSMPYSPALEGASPANRPGALDPLASAQLFSKEITKLTLFGPARQKIHSQAQDYAVHARVALGRTAELDDEDEQNRDGDDSRGNASRSRPPRPVFGLIGDEDKSVRAHGARILLSLSAPDDAEEFACYGVAGGDIASLCRQRRAFARTLFAEYVKRDVKMTLKYDSVSIHDKEAVDIRTDGKVDMSMAVLGEGATDGRILHQAPTYFNNTWKHRKKLRTWQSAYILSRAFEDEAYLSATAPEGATLEATFRSVVNASYRPNLTPVGYYVEWILARLALLRPSLVSIIDDALNTPNLRTNAYCTMLKVVAHIARNVGAGFCAGMRPQQSAARDSPLLEASDAQPAPAFAPSFGAARDKFAVTWLRMTPLDPRSMGASARDADMLRAWCDVLCRFPEDAIPLASTSFYVVRVFAIGAMRDCVDARCILSRALEARARTAAPNSADDYVAAAATDIASRLRLGSIYSDTLVLRLLDRVLTDESVCAYIRKIDEDGFAGRLRVSVDSTFQGIFETMPATCDMQHDELVPPEAIASSCASASPAADHATTLFGMPLNDRADSTCWEAVPVSGASSGGASSVAGMDGDMSESKQSTSVQRKIQPPDSLVDYPDKTVEVAAGAVAVDSGAGQSVVGFRAIASRALATSGLDDTPSLIVVASLVDKVTNLGGLCRTCEIFRASLLVVPDAAILSDTEFKALTVTADRWMPMEAVAPENLARYLADKRREGYALVGAEQTSDSIKLGSADCAFPSRTVLVLGGEREGIPVDLIQLLDACIEIPQFGIIRSLNVHVSGAILIWEYARQWRLDVGTDPHDG* # ORIGINAL: g12836.t1 original gene structure, not modified by PASA NODE_490_length_22638_cov_41.6601 AUGUSTUS gene 125 2328 . + . ID=g12836;Name=g12836.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS mRNA 125 2328 . + . ID=g12836.t1;Parent=g12836;Name=g12836.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 125 2089 . + . ID=g12836.t1.exon1;Parent=g12836.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 125 2089 . + 0 ID=cds.g12836.t1;Parent=g12836.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS exon 2284 2328 . + . ID=g12836.t1.exon2;Parent=g12836.t1 NODE_490_length_22638_cov_41.6601 AUGUSTUS CDS 2284 2328 . + 0 ID=cds.g12836.t1;Parent=g12836.t1 #PROT g12836.t1 g12836 DRHPDRSRRSVEGRSPSDAPRTPRRERGGAGRGRAAHKEESSSARADSAGGSTPTTDRSESGAADAPDGRRRGSTGAGDGASPAVRQTAPRSAPPSAERRGRRSVEQPDHHVTASSASNGDLRAVVEAAKSASTQPQARDRKAPQVPTPTHAPSAAPASPPVNGAAADESQSGTPRKGRGLGANELLRMQLQRMNIDQRREDLSPATKTEIIHPGGDGKVVPPPDTNPIRGNRDRGDRLDRKGDDSRGRRNVASSTQQAHGTPQHHQHHQQQQQQQPHTHSPAHSPAHANASRQRTPKESPVRAHHAAGGADTAKLHGEHGGQERHVTGKGVATPPATAAPAQQQEAQPQQQQQQQQQQQVSQAQPAQSQAQSQVQSQAQRAPVSMVPSAPAQQQTSAVSPVDAQQLEMYLQHMQMMGAAMDPSMYGGGEFIAMQQQANGAYIPVQVGMGAMGAMGAMGAMGQMQMAQMQSPRARQPSPSGAKRYSSKRGGGSGAGGVSADGDMLMPGMDASAGAAAMMQMPMPLMYASAPVPGYEFMVPGQFVPSGFGQAQYPMMQYGAVAPGYGVAPGAQAASGGAMGGVGAQYYGPPTGTVYFNTMGGPAPAGTVMTSAQITGAGASNKRPSAAVQITAPTGESLAYQQQQYQQQQQQQQQQAHALTFAWVAVAPV* # PASA_UPDATE: g11288.t1, single gene model update, valid-1, status:[pasa:asmbl_6308,status:12], valid-1 NODE_3614_length_3114_cov_37.2547 . gene 209 2935 . + . ID=g11288;Name=g11288.t1 NODE_3614_length_3114_cov_37.2547 . mRNA 209 2935 . + . ID=g11288.t1;Parent=g11288;Name=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 209 328 . + . ID=g11288.t1.exon1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 209 328 . + 0 ID=cds.g11288.t1;Parent=g11288.t1;5_prime_partial=true NODE_3614_length_3114_cov_37.2547 . exon 733 1176 . + . ID=g11288.t1.exon2;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 733 1176 . + 0 ID=cds.g11288.t1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 1368 1505 . + . ID=g11288.t1.exon3;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 1368 1505 . + 0 ID=cds.g11288.t1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 1691 1813 . + . ID=g11288.t1.exon4;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 1691 1813 . + 0 ID=cds.g11288.t1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 2053 2186 . + . ID=g11288.t1.exon5;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 2053 2186 . + 0 ID=cds.g11288.t1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 2426 2615 . + . ID=g11288.t1.exon6;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 2426 2615 . + 1 ID=cds.g11288.t1;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . exon 2842 2935 . + . ID=g11288.t1.exon7;Parent=g11288.t1 NODE_3614_length_3114_cov_37.2547 . CDS 2842 2935 . + 0 ID=cds.g11288.t1;Parent=g11288.t1;3_prime_partial=true #PROT g11288.t1 g11288 ERKTESFTVLRKHISDLIGWRRQIISGTLPEDQLRDIRCQASLRIDTGNRMLNLDMVPRNEAGDALDADSIGIIDLFKVHQRSAADIIQNTRNAPASTKDAAPSSQAARRAAKQPSGASHHLLFEMKNFVCSVGEDSDVHISLYNAPEDRFLSEEYLVRLSRGGLPHDIDKINNLRALFVDLGAKDLQADVYLVCRIVRVGKMLPEDKDKKGANTFRRPFGCAVMSVSEVLAGKVSKEEEDKEHLIPIYTCGEDDAHQLHTDIIRKSKGPELVSKAKGIYVSMKLLNGELEQLKKESMLRNVTMCSKLGFADVIYPGDVRNDFYVTVGTGNFQQGHKTTAKNVECCVSVVLENGEVLPDCISLGSGEKLVSEVQSVIYYHSNQPRWNETFRINVSPDRFFKAHLRFYFRHLSSG # ORIGINAL: g5394.t1 original gene structure, not modified by PASA NODE_1005_length_14840_cov_42.6437 AUGUSTUS gene 13771 14641 . - . ID=g5394;Name=g5394.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS mRNA 13771 14641 . - . ID=g5394.t1;Parent=g5394;Name=g5394.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 14424 14641 . - . ID=g5394.t1.exon1;Parent=g5394.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 14424 14641 . - 0 ID=cds.g5394.t1;Parent=g5394.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 13771 13870 . - . ID=g5394.t1.exon2;Parent=g5394.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 13771 13870 . - 1 ID=cds.g5394.t1;Parent=g5394.t1 #PROT g5394.t1 g5394 MQGVRSVKNTDLRARFAFITPPSFEELERRLRGRGTETPESLAKRLSAAQGEMDYGLAKGNFDIVIVNEDVEKAYKQLIDFVADDIHALRAQNERKAALAQKAGP* # ORIGINAL: g5392.t1 original gene structure, not modified by PASA NODE_1005_length_14840_cov_42.6437 AUGUSTUS gene 1633 9255 . - . ID=g5392;Name=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS mRNA 1633 9255 . - . ID=g5392.t1;Parent=g5392;Name=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 9147 9255 . - . ID=g5392.t1.exon1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 9147 9255 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 8740 8877 . - . ID=g5392.t1.exon2;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 8740 8877 . - 2 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 8419 8480 . - . ID=g5392.t1.exon3;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 8419 8480 . - 2 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 8135 8177 . - . ID=g5392.t1.exon4;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 8135 8177 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 7605 7952 . - . ID=g5392.t1.exon5;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 7605 7952 . - 2 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 7259 7395 . - . ID=g5392.t1.exon6;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 7259 7395 . - 2 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 6371 6886 . - . ID=g5392.t1.exon7;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 6371 6886 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 6080 6219 . - . ID=g5392.t1.exon8;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 6080 6219 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 5680 5850 . - . ID=g5392.t1.exon9;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 5680 5850 . - 1 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 5293 5341 . - . ID=g5392.t1.exon10;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 5293 5341 . - 1 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 4732 4863 . - . ID=g5392.t1.exon11;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 4732 4863 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 4230 4329 . - . ID=g5392.t1.exon12;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 4230 4329 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 3685 3967 . - . ID=g5392.t1.exon13;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 3685 3967 . - 2 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 3314 3383 . - . ID=g5392.t1.exon14;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 3314 3383 . - 1 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 2962 3039 . - . ID=g5392.t1.exon15;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 2962 3039 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 2582 2637 . - . ID=g5392.t1.exon16;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 2582 2637 . - 0 ID=cds.g5392.t1;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 1633 2413 . - . ID=g5392.t1.exon17;Parent=g5392.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 1633 2413 . - 1 ID=cds.g5392.t1;Parent=g5392.t1 #PROT g5392.t1 g5392 MDDLKTIVIHIHEIAETITFSESMRDEQLVEVLRSAARAGPADYLLLRATETRAIVPIVTSLPENTASTPYILTVVPYKINAGVEGRTGSIKRSSFTERRLNELRDNARPSLSIDCSDPGYAPAVESTLLSSYHALGHSNTSSHLNLLSPKRSAIGTHFASDVDYQTTPTKRDSTFTSFGLSFTHKPRVAQTDMPYAPSDEKRIDMSVSFKDTDHSQARDTASPLHFAAAMPEDTDTGHPLQSSDPVEMLRAEARRVREKELADMRPRYLIRIDSMFAKIWTAFYLTAIVIDVFVIPFSIAFPDKDGTLSAALILSYALDVVLVADIILRFQWEAVDGRRRIEMATDIRRHYRRGQFRWDAFGVAPFDIIALAYGGVFLLPLLRLNRLVNLPKVVRYFRVQENDIKRETGMIRVRMYAICGLMIMHILACIWHIISCHPVIGEGRIHCSSKLTETAAPVIRPCLLLYSQGWLISSGHVEFVTSKLDAYVVSFYWTVCSMTSVGYGDIIAGTNLERIYACIVMVLGVCLFSFIMGNIASAVASADAMRADFRHKVRTVREYMAYHDIRPKLQHEVEDFYVHEWYTKNGVDTSFYNSLPDAFRSEIALEINRKQLLKVPLFQDCNEDILKELALRMRPVSLLADKYVIRRGEDSRDIFFLMEGLVRIISEEDGTVYAEQTKGSFFGEVGVLFDLPRTATVVTATHCDMFLLSKRDLLSVVAKFEPLRDKLDKCAGERLTWFKTRRYVDTGNDFGGNLEIEMNVENLRKVDLFRDCGENALLRELASSMETITYEPGDMIIRKGSIGHEMFFINRGSAVITGDSDKQVFATVSEGAYFGEIGILFCVPRSANVRAVSHCHLMVLFKEMFDLIMAKYPTIRERIMDTANKRLNKTAAPPTQPSQPDKSPLENDSAGAGEGPFARTLRRMSNIGPAIMRTPIGRRVSLSATSAFASHSSGAMLSPSPSQRAAGESTSAMGASAAALTLDHVRVDTHMGEFAEISANEHRRTVAAFERGQCRDEEGLPSVEVAEVADGTCFDSRDRSSPGADYHSLSASASTSEGVFRFEISESCE* # ORIGINAL: g5393.t1 original gene structure, not modified by PASA NODE_1005_length_14840_cov_42.6437 AUGUSTUS gene 11346 12974 . + . ID=g5393;Name=g5393.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS mRNA 11346 12974 . + . ID=g5393.t1;Parent=g5393;Name=g5393.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS exon 11346 12974 . + . ID=g5393.t1.exon1;Parent=g5393.t1 NODE_1005_length_14840_cov_42.6437 AUGUSTUS CDS 11346 12974 . + 0 ID=cds.g5393.t1;Parent=g5393.t1 #PROT g5393.t1 g5393 MDRLYYNPQEHIPEFPSVHSIQSHRRHTVCGDAVESSGIPYSGGVVWPSSLRGESRRLCGSASLPTAQMASAAVGGFFAQSDGLPHTQALQMAAYSHNELDGFTSDFDDLGLFETATQAHQPMSHQTVSRDDGKRCPEQDVALAWLSSQLGPFLNAAMTPTAQSSSYADNFLHIGHARVNSHTFGYEHSGNSNCEATGIFSDCDADDRSDATGMWDDVVWDADTTPPQTSVGVPIAVDSSYGAMSIFDGNSSVSYGSEDSGYSGQPVTCVSAPQSPSGASASHGENDPGFEVSRDSRSSDTGALPLDHGKGCYETSLDVPQDIYIDAYPPPATMDTTASMHSRTSSDTLQRNASPGSSDGQASILLFACEWLRRKPSPDSDTTALPPSPRSTASRREATLTDVPRARLLRSRSHPERNQRETKRAKRNLLNRDKRRSFSGESSTSRELAMSAAAAVIQTPARDACVYGSRPQGATSSDSGGGAWSQPQVPTQTLMTDASRATDKYFYRKRHRVEVTELLRSSFGNTIRKECVRDGVVIMHMQ* # PASA_UPDATE: g4377.t1, single gene model update, valid-1, status:[pasa:asmbl_2824,status:12], valid-1 NODE_1859_length_8867_cov_40.4202 . gene 272 1130 . - . ID=g4377;Name=g4377.t1 NODE_1859_length_8867_cov_40.4202 . mRNA 272 1130 . - . ID=g4377.t1;Parent=g4377;Name=g4377.t1 NODE_1859_length_8867_cov_40.4202 . five_prime_UTR 853 1130 . - . ID=g4377.t1.utr5p1;Parent=g4377.t1 NODE_1859_length_8867_cov_40.4202 . exon 272 1130 . - . ID=g4377.t1.exon1;Parent=g4377.t1 NODE_1859_length_8867_cov_40.4202 . CDS 272 852 . - 0 ID=cds.g4377.t1;Parent=g4377.t1;3_prime_partial=true #PROT g4377.t1 g4377 MVLADLGRRITTALRSMTNATVIDEEVLDAMLKEICAALLESDVNVRLVKQLRTNVKAAIDFDEMAAGLNKRRIIQKAVFDELCRLVDPGVKPFQPVKGKPNVIMFVGLQGSGKTTTCTKLAYFYHKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEADPVVIAEEGVSKFKNEGFEIIIVDTSG # PASA_UPDATE: g4378.t1, single gene model update, valid-1, status:[pasa:asmbl_2823,status:3], valid-1 NODE_1859_length_8867_cov_40.4202 . gene 1661 6466 . + . ID=g4378;Name=g4378.t1 NODE_1859_length_8867_cov_40.4202 . mRNA 1661 6466 . + . ID=g4378.t1;Parent=g4378;Name=g4378.t1 NODE_1859_length_8867_cov_40.4202 . five_prime_UTR 1661 1788 . + . ID=g4378.t1.utr5p1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 1661 1881 . + . ID=g4378.t1.exon1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 1789 1881 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 2252 2336 . + . ID=g4378.t1.exon2;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 2252 2336 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 2760 3057 . + . ID=g4378.t1.exon3;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 2760 3057 . + 2 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 3250 3334 . + . ID=g4378.t1.exon4;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 3250 3334 . + 1 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 3581 3651 . + . ID=g4378.t1.exon5;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 3581 3651 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 3903 4053 . + . ID=g4378.t1.exon6;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 3903 4053 . + 1 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 4288 4359 . + . ID=g4378.t1.exon7;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 4288 4359 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 4633 4734 . + . ID=g4378.t1.exon8;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 4633 4734 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 5023 5142 . + . ID=g4378.t1.exon9;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 5023 5142 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 5329 5409 . + . ID=g4378.t1.exon10;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 5329 5409 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . exon 5863 6466 . + . ID=g4378.t1.exon11;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . CDS 5863 6054 . + 0 ID=cds.g4378.t1;Parent=g4378.t1 NODE_1859_length_8867_cov_40.4202 . three_prime_UTR 6055 6466 . + . ID=g4378.t1.utr3p1;Parent=g4378.t1 #PROT g4378.t1 g4378 MGFFSKQSDDKSDDKMSEGAATSGTDSDNDVFEDALEGSSGAVDENNLPDEHLDHVTLDEQLAQSSARQRRTALPSEDTRGNFSFWTVMKNSIGKDLSKIAMPIQFNEPISFLQRLCEDYEYTSALDEAANVDKNASSALRTAFVAAFALTSYSTTDGRVGKPFNPLLGETYECVREDMGWRYIAEQVSHHPPITSAHCESRSWACWQEYRLCSKFRGQYLKVMPEGCQFVRIKATGELLSWRKPTTTIHNIILGKLWIDHEGDIVVTNHTTGDIATIHCHPWSKVGKTYREITGHVHDAEGNEVLELTGGWETSVEAKPVGDSDVAAPVTLWTCNPRIPEAAKQYGFTKFAAQLNEMEAGVCPTDSRLRPDQRLMEEGKIDEGAKEKTRLEEKQRSVRKAREAVGRPYTPRWFTKKGKPDNDDVIHVYKGGYWDAKKKGVFEDVADIY* # PASA_UPDATE: g2826.t1, single gene model update, valid-1, status:[pasa:asmbl_7751,status:12], valid-1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . gene 64 643 . - . ID=g2826;Name=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . mRNA 64 643 . - . ID=g2826.t1;Parent=g2826;Name=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . five_prime_UTR 549 643 . - . ID=g2826.t1.utr5p1;Parent=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . exon 359 643 . - . ID=g2826.t1.exon1;Parent=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . CDS 359 548 . - 0 ID=cds.g2826.t1;Parent=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . exon 64 205 . - . ID=g2826.t1.exon2;Parent=g2826.t1 NODE_4969_length_1110_cov_28.4174_potentialcontaminant . CDS 64 205 . - 2 ID=cds.g2826.t1;Parent=g2826.t1;3_prime_partial=true #PROT g2826.t1 g2826 MSQTEGVAQSAAVTGSVAAAATTSGMAGIASSLPLSVPVTTPRPDSITMKFMIGGTACAITSGIVHPVDTIKIRLQMQRSGKLGNVEHYRGFLHCAERIFKTEGLRGFMR # ORIGINAL: g3343.t1 original gene structure, not modified by PASA NODE_5771_length_722_cov_50.0958 AUGUSTUS gene 59 426 . - . ID=g3343;Name=g3343.t1 NODE_5771_length_722_cov_50.0958 AUGUSTUS mRNA 59 426 . - . ID=g3343.t1;Parent=g3343;Name=g3343.t1 NODE_5771_length_722_cov_50.0958 AUGUSTUS exon 370 426 . - . ID=g3343.t1.exon1;Parent=g3343.t1 NODE_5771_length_722_cov_50.0958 AUGUSTUS CDS 370 426 . - 0 ID=cds.g3343.t1;Parent=g3343.t1 NODE_5771_length_722_cov_50.0958 AUGUSTUS exon 59 196 . - . ID=g3343.t1.exon2;Parent=g3343.t1 NODE_5771_length_722_cov_50.0958 AUGUSTUS CDS 59 196 . - 0 ID=cds.g3343.t1;Parent=g3343.t1 #PROT g3343.t1 g3343 MLIEMLEGEPPYLDEEPLKALYLIATNGTPKLKNPQRTAADIRDFLDKCLVVDVEKRLDAEELLK # PASA_UPDATE: g10153.t1, single gene model update, valid-1, status:[pasa:asmbl_6033,status:12], valid-1 NODE_3410_length_3532_cov_37.6185 . gene 240 2102 . + . ID=g10153;Name=g10153.t1 NODE_3410_length_3532_cov_37.6185 . mRNA 240 2102 . + . ID=g10153.t1;Parent=g10153;Name=g10153.t1 NODE_3410_length_3532_cov_37.6185 . five_prime_UTR 240 241 . + . ID=g10153.t1.utr5p1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 240 316 . + . ID=g10153.t1.exon1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 242 316 . + 0 ID=cds.g10153.t1;Parent=g10153.t1;5_prime_partial=true NODE_3410_length_3532_cov_37.6185 . exon 434 577 . + . ID=g10153.t1.exon2;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 434 577 . + 0 ID=cds.g10153.t1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 830 889 . + . ID=g10153.t1.exon3;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 830 889 . + 0 ID=cds.g10153.t1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 1173 1288 . + . ID=g10153.t1.exon4;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 1173 1288 . + 0 ID=cds.g10153.t1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 1545 1601 . + . ID=g10153.t1.exon5;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 1545 1601 . + 1 ID=cds.g10153.t1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 1768 1890 . + . ID=g10153.t1.exon6;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 1768 1890 . + 1 ID=cds.g10153.t1;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . exon 2039 2102 . + . ID=g10153.t1.exon7;Parent=g10153.t1 NODE_3410_length_3532_cov_37.6185 . CDS 2039 2102 . + 1 ID=cds.g10153.t1;Parent=g10153.t1 #PROT g10153.t1 g10153 KADKETHFSVDITMTPQRTEDFGREVQHVWGQVLKELRSAVVDYDRTAELVGTLGYFLLHMVPVSKGSNVVIKTVLFALLIAAGKESARPLPRDVQFEMQAYLASSAADFTKGIWPFFLSSNPRAVSFLAEGCKRKPKEALRDHCQPTAKRDAQSQPPLLLAPIVVSSPNVQATLPTMRAMLEHLNVMAECRAPSGRGGRGPSTVTSGEYEG* # PASA_UPDATE: g10154.t1, single gene model update, valid-1, status:[pasa:asmbl_6032,status:3], valid-1 NODE_3410_length_3532_cov_37.6185 . gene 2282 3396 . - . ID=g10154;Name=g10154.t1 NODE_3410_length_3532_cov_37.6185 . mRNA 2282 3396 . - . ID=g10154.t1;Parent=g10154;Name=g10154.t1 NODE_3410_length_3532_cov_37.6185 . five_prime_UTR 3356 3396 . - . ID=g10154.t1.utr5p1;Parent=g10154.t1 NODE_3410_length_3532_cov_37.6185 . exon 2282 3396 . - . ID=g10154.t1.exon1;Parent=g10154.t1 NODE_3410_length_3532_cov_37.6185 . CDS 2393 3355 . - 0 ID=cds.g10154.t1;Parent=g10154.t1 NODE_3410_length_3532_cov_37.6185 . three_prime_UTR 2282 2392 . - . ID=g10154.t1.utr3p1;Parent=g10154.t1 #PROT g10154.t1 g10154 MKTFAIILALCVATACAVDLAAFNRWKLQHGRKYASDGEETARRAIWNDNYNLIQKHNIKGEKSYTLAMNQFGDLTNDEYRSIFLGTFRKSTNATLHTIIGANPTSVDWRTKGYVTGVKDQGQCGSCWAFSTVASLEGQHFKKTGTLVSLSEQNLVDCSTAQGNEGCNGGLMDQGFDYIIKNKGIDTEASYPYKAVDGKCAYNAANSGATVSSYKDIPSGDESSLTDAAANIGPISVAIDASQSSFQFYSSGVYDETGCSSSQLDHGVAVVGYGTDAKGGDYYIVKNSWGGSWGLSGYIWMSRNKSNQCGIATAASYPIV* # PASA_UPDATE: g2139.t1, single gene model update, valid-1, status:[pasa:asmbl_7077,status:12], valid-1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . gene 49 1916 . - . ID=g2139;Name=g2139.t1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . mRNA 49 1916 . - . ID=g2139.t1;Parent=g2139;Name=g2139.t1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . exon 397 1916 . - . ID=g2139.t1.exon1;Parent=g2139.t1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . CDS 397 1916 . - 0 ID=cds.g2139.t1;Parent=g2139.t1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . exon 49 178 . - . ID=g2139.t1.exon2;Parent=g2139.t1 NODE_4193_length_2040_cov_42.2265_potentialcontaminant . CDS 49 178 . - 1 ID=cds.g2139.t1;Parent=g2139.t1;3_prime_partial=true #PROT g2139.t1 g2139 MRVYPADDSQQQTGDDLLKESLYDSAVGSSIRDSSGSDESATDRVSTATNATTATTFATTTTSASTAAKPAPRDGSGGMDANTVPLSDDDTDVALPGSVPHYSAFEDADEAKRIAWQKKSRRGTVFEGTRPSMSTGPAPSPMLSSAAGAKSAVGRRNTGDTPFTNGLVRTAAVETGTLMQTGVFGSRDVLANKAEHSGSRASAMEEVTGGDFLDLVHDFVESDSYEPRKWRSVVLLGMQKWTLWFHSKRLEAEYLRVTWRREKPILFKFSLFLWAVYALLGVADYLLREGRNATLAWQLRAVGVTIFLTFLLSCTYLTKQIAAVFRILFRMRVEYGVIFRWLGSGELVAFFVFALIAVILTDSPSRPEAGDLLSGSLMLSMVGVIGLPAMHMIFVSYIISVSVLLGWLPGLFYAYYEGTHETVALWRALLGIGIVVGLAMPCLFNREFSNRESFIAVRVFERQRERISTEHRFAENMLSNIMPRSVVERLKRDASNLLIADSIDLASVLCMDVVSFTTMCSKLLPMQVITILNTLFTEFDNAVEALGIEK # PASA_UPDATE: g2668.t1, single gene model update, valid-1, status:[pasa:asmbl_3871,status:12], valid-1 NODE_2245_length_7095_cov_21.0764_potentialcontaminant . gene 3378 6102 . - . ID=g2668;Name=g2668.t1 NODE_2245_length_7095_cov_21.0764_potentialcontaminant . mRNA 3378 6102 . - . ID=g2668.t1;Parent=g2668;Name=g2668.t1 NODE_2245_length_7095_cov_21.0764_potentialcontaminant . exon 3378 6102 . - . ID=g2668.t1.exon1;Parent=g2668.t1 NODE_2245_length_7095_cov_21.0764_potentialcontaminant . CDS 4000 6102 . - 0 ID=cds.g2668.t1;Parent=g2668.t1 NODE_2245_length_7095_cov_21.0764_potentialcontaminant . three_prime_UTR 3378 3999 . - . ID=g2668.t1.utr3p1;Parent=g2668.t1 #PROT g2668.t1 g2668 MFARMKRGRGADASWARDLSDMDAQEAWDIVTRRLFADGNADVVNLIRMSGAVQQTTRGVVIKKSPEVARDFLCAVACLHRSETLIKSLLQHPQVDPAALDNLAVRLAADTSTGRSWCLKVLLSDARVDPSAQQNAALRAACAAGSSSAAKLLLSDRRVNPHSAATAALKVASQSGHAKIVRLLLSRGGDPAADGGEAACCACERGHVSVVNCFFRDARFDIDRFGSAMLSAACRGGNADVVTLLLCTGRINSSVDRCAGLRVACARGHDGVVKALIKAGNCDFSSCDPSVLVDACRSGNVEVVRVLLARRLPNLASCRAAALAAALSCKHVSVASELMTPADLPTIARYGYKELVRALLRHRDVDPEANASEALVGACQAGHVEVVVLLLGDGRSDPAACDNELLRTCAARGWTDILARLLVGRSAVPKGSKRAALDASSRENEALRLACANNHAGCVTLLLKDAIVDASSQESVALRTACEQGYTDVVRQLLDDRRQGLRVDPLARNSEALRAACRIGHASIVALLLADGRADPRAADGEALSQACGHNHVQIARMLLADRRADPSAAESAAFRYACRNGLLTVMELLMASGKVNLAARNNECARVAQEGIASYRRNAADVLRLLVSSGDPRVGRFVFPVSYEAKRRRGMASLADAVALRVLLNPYHPVGRRRLEYTFIELVEEREAMIADRRSDDHH* # ORIGINAL: g12317.t1 original gene structure, not modified by PASA NODE_3477_length_3373_cov_43.1501 AUGUSTUS gene 2735 3305 . + . ID=g12317;Name=g12317.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS mRNA 2735 3305 . + . ID=g12317.t1;Parent=g12317;Name=g12317.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 2735 2840 . + . ID=g12317.t1.exon1;Parent=g12317.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 2735 2840 . + 0 ID=cds.g12317.t1;Parent=g12317.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 2959 3305 . + . ID=g12317.t1.exon2;Parent=g12317.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 2959 3305 . + 2 ID=cds.g12317.t1;Parent=g12317.t1 #PROT g12317.t1 g12317 MLSDSDDGGGELTLTVNKKFADHYERRKEKEELTRLKDRYEVSEDESTSEEEDEEADMLTPKVEEQIFRTIALLKNRDPRIYDPNFKLFGAEKEAAGETAVTKPKKVCFCVSVYGFSAPFLCALMFEVVSGIRHPVPCSVGRCIGIAFHR* # ORIGINAL: g12314.t1 original gene structure, not modified by PASA NODE_3477_length_3373_cov_43.1501 AUGUSTUS gene 119 231 . - . ID=g12314;Name=g12314.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS mRNA 119 231 . - . ID=g12314.t1;Parent=g12314;Name=g12314.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 119 231 . - . ID=g12314.t1.exon1;Parent=g12314.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 119 231 . - 0 ID=cds.g12314.t1;Parent=g12314.t1 #PROT g12314.t1 g12314 MRWAIAGPPLLQKADWPIHKQTCLSHAEAQKIPMVHV # ORIGINAL: g12315.t1 original gene structure, not modified by PASA NODE_3477_length_3373_cov_43.1501 AUGUSTUS gene 456 899 . - . ID=g12315;Name=g12315.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS mRNA 456 899 . - . ID=g12315.t1;Parent=g12315;Name=g12315.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 456 899 . - . ID=g12315.t1.exon1;Parent=g12315.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 456 899 . - 0 ID=cds.g12315.t1;Parent=g12315.t1 #PROT g12315.t1 g12315 MMQFNNNMVIKLNEAIDHQNEGCTLFLKQRYTESLNHEAALKIKRSLFASDDTRIAMTLLTMADTLRELGRYDEAEKVALEGLHIREKARDPETRYAHECLEALRRARYNARKAAGETGIEKDYRPCGNVKCGKQGVYRCTKCTVKR* # ORIGINAL: g12316.t1 original gene structure, not modified by PASA NODE_3477_length_3373_cov_43.1501 AUGUSTUS gene 1740 2437 . + . ID=g12316;Name=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS mRNA 1740 2437 . + . ID=g12316.t1;Parent=g12316;Name=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 1740 2025 . + . ID=g12316.t1.exon1;Parent=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 1740 2025 . + 0 ID=cds.g12316.t1;Parent=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 2105 2242 . + . ID=g12316.t1.exon2;Parent=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 2105 2242 . + 2 ID=cds.g12316.t1;Parent=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS exon 2337 2437 . + . ID=g12316.t1.exon3;Parent=g12316.t1 NODE_3477_length_3373_cov_43.1501 AUGUSTUS CDS 2337 2437 . + 2 ID=cds.g12316.t1;Parent=g12316.t1 #PROT g12316.t1 g12316 MSSDKEHFDASGEMPTRAFVDADGAQNSTEMAGDESGEVMSVDNIMSTLNCLVPGEFEVAEISEPRMMHSSIKAQLGDMAERLGAYRIRHFHAFQVYSEEVQKTMTAVYENSWHTYNAFNYTMEKHYFGKINEVNGALERIESLMEEIRQMHDKANEYYAILFGMPQAIPAQSQ* # PASA_UPDATE: g1714.t1, single gene model update, valid-1, status:[pasa:asmbl_3698,status:3], valid-1 NODE_2179_length_7395_cov_38.3652 . gene 1218 3574 . + . ID=g1714;Name=g1714.t1 NODE_2179_length_7395_cov_38.3652 . mRNA 1218 3574 . + . ID=g1714.t1;Parent=g1714;Name=g1714.t1 NODE_2179_length_7395_cov_38.3652 . five_prime_UTR 1218 1487 . + . ID=g1714.t1.utr5p1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 1218 1587 . + . ID=g1714.t1.exon1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 1488 1587 . + 0 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 1844 1929 . + . ID=g1714.t1.exon2;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 1844 1929 . + 2 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 2055 2143 . + . ID=g1714.t1.exon3;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 2055 2143 . + 0 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 2432 2556 . + . ID=g1714.t1.exon4;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 2432 2556 . + 1 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 2901 3028 . + . ID=g1714.t1.exon5;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 2901 3028 . + 2 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . exon 3210 3574 . + . ID=g1714.t1.exon6;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . CDS 3210 3353 . + 0 ID=cds.g1714.t1;Parent=g1714.t1 NODE_2179_length_7395_cov_38.3652 . three_prime_UTR 3354 3574 . + . ID=g1714.t1.utr3p1;Parent=g1714.t1 #PROT g1714.t1 g1714 MSAASSPAAARRASPKKTKDYDHLFKLLLIGESGVGKSSILLRFADNTFTETYIMTIGVDFKIKTVRIGDETVKLQIWDTAGQERFRTITSTYYRGTHGVMVVYDVTDKRSFDSVRRWMQEIDTNCDTAARVLLGNKSDYPIQKKEVSHEDARLYAEEVKVEFFETSAKTGANVEEAFLALTTLCLGKRKASTLANTPKGDKFRLQNSTPAHKSRVPTCCQSL* # PASA_UPDATE: g1715.t1, single gene model update, valid-1, status:[pasa:asmbl_3697,status:12], valid-1 NODE_2179_length_7395_cov_38.3652 . gene 3843 7120 . - . ID=g1715;Name=g1715.t1 NODE_2179_length_7395_cov_38.3652 . mRNA 3843 7120 . - . ID=g1715.t1;Parent=g1715;Name=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 6920 7120 . - . ID=g1715.t1.exon1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 6920 7120 . - 0 ID=cds.g1715.t1;Parent=g1715.t1;5_prime_partial=true NODE_2179_length_7395_cov_38.3652 . exon 6506 6602 . - . ID=g1715.t1.exon2;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 6506 6602 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 6261 6307 . - . ID=g1715.t1.exon3;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 6261 6307 . - 2 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 5931 6059 . - . ID=g1715.t1.exon4;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 5931 6059 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 5666 5758 . - . ID=g1715.t1.exon5;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 5666 5758 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 5292 5376 . - . ID=g1715.t1.exon6;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 5292 5376 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 4981 5126 . - . ID=g1715.t1.exon7;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 4981 5126 . - 2 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 4684 4773 . - . ID=g1715.t1.exon8;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 4684 4773 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 4227 4373 . - . ID=g1715.t1.exon9;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 4227 4373 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . exon 3843 4104 . - . ID=g1715.t1.exon10;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . CDS 4033 4104 . - 0 ID=cds.g1715.t1;Parent=g1715.t1 NODE_2179_length_7395_cov_38.3652 . three_prime_UTR 3843 4032 . - . ID=g1715.t1.utr3p1;Parent=g1715.t1 #PROT g1715.t1 g1715 TGGPGCSSQIALFYENGPCHLNADGSATTININSWNTRASLIFIDQPAGTGFSYGNFPSDYDTNEDQVAADMLVFLQEFFTNHPELQANDFYIFGESYGGHFVPAVSARVHSNNKNGTGLKLNFKGLGVGNGLTDPELQYPQYPEMALNNGVRPLVSQATYEKMKAAVPGCVKLIQSCQQHALSCDLAQITCNAGLLNPPLAGGVNQYDVRINCTVPGLCYDFSAAEKFLGRADVIKALGVTGHKWSECSTTVNMMFSGDWMKEYQNLLPPMIADGIRVLIYAGEDDFICNYLGNKAWALALEWPSKAEFASADDKSWVVNGKEAGLVRNVGGFTFLQVHNAGHMVPMDQPENSLVMLDTFLDNKLFA* # PASA_UPDATE: g12379.t1, single gene model update, valid-1, status:[pasa:asmbl_4809,status:3], valid-1 NODE_268_length_28647_cov_54.533 . gene 19338 21520 . + . ID=g12379;Name=g12379.t1 NODE_268_length_28647_cov_54.533 . mRNA 19338 21520 . + . ID=g12379.t1;Parent=g12379;Name=g12379.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 19338 19410 . + . ID=g12379.t1.utr5p1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 19338 19487 . + . ID=g12379.t1.exon1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 19411 19487 . + 0 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 19660 19719 . + . ID=g12379.t1.exon2;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 19660 19719 . + 1 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 19827 19923 . + . ID=g12379.t1.exon3;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 19827 19923 . + 1 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 20082 20188 . + . ID=g12379.t1.exon4;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 20082 20188 . + 0 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 20428 20436 . + . ID=g12379.t1.exon5;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 20428 20436 . + 1 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 20702 20749 . + . ID=g12379.t1.exon6;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 20702 20749 . + 1 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . exon 20921 21520 . + . ID=g12379.t1.exon7;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . CDS 20921 21035 . + 1 ID=cds.g12379.t1;Parent=g12379.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 21036 21520 . + . ID=g12379.t1.utr3p1;Parent=g12379.t1 #PROT g12379.t1 g12379 MGRNTLFVDNVSPYIKAADLGYEFEKYGRLVRCDIPSSKRGRGGAAYAFVEYEDERDAEDAYDRMHNKKIDGYAVRVEWAKNTPSRAWRSGSPPPRRGGRGRSRSRSRSRSPRRSPPRRDRSRSKSRSASPAKREKSRSRSPSRSPVRGDDSESKREPEAGAEGQASPSR* # PASA_UPDATE: g12377.t1, single gene model update, valid-1, status:[pasa:asmbl_4815,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 14688 15924 . - . ID=g12377;Name=g12377.t1 NODE_268_length_28647_cov_54.533 . mRNA 14688 15924 . - . ID=g12377.t1;Parent=g12377;Name=g12377.t1 NODE_268_length_28647_cov_54.533 . exon 14688 15924 . - . ID=g12377.t1.exon1;Parent=g12377.t1 NODE_268_length_28647_cov_54.533 . CDS 14878 15924 . - 0 ID=cds.g12377.t1;Parent=g12377.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 14688 14877 . - . ID=g12377.t1.utr3p1;Parent=g12377.t1 #PROT g12377.t1 g12377 MAHVDVDTTLEEIDLSGRMLTEFPLEVLRCANLRVLNLADNEIKDIPHEISSLTRLRDVNLSGNRIESLCDEFGELAELQRLNLNSNRMRDLPSSFAKLASLETLNAAGNLLEDIPVAICSLPQLRKLYLGANLLSAVRPEVSLLVHLEVLYLGGNRIEEISPSVSSLSRLSVLYLGDNRITSIPADMVKLTSLRTLNLHNNRIEVLPSEIVNLRSLTELSIRGNPLVSRFAADMPSAPPSLLELCGRAIKNNAVGYCNSSLPCNLVSYLDSARRCENPACKGVYFSASVRRVEFVDFCGKYRVPFLQYLCSSHDNSTRGCAGDGESPLVNKVLLDQWRPSNAEDDDF* # PASA_UPDATE: g12378.t1, single gene model update, valid-1, status:[pasa:asmbl_4808,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 17680 18875 . + . ID=g12378;Name=g12378.t1 NODE_268_length_28647_cov_54.533 . mRNA 17680 18875 . + . ID=g12378.t1;Parent=g12378;Name=g12378.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 17680 17722 . + . ID=g12378.t1.utr5p1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . exon 17680 17818 . + . ID=g12378.t1.exon1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . CDS 17723 17818 . + 0 ID=cds.g12378.t1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . exon 17966 18148 . + . ID=g12378.t1.exon2;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . CDS 17966 18148 . + 0 ID=cds.g12378.t1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . exon 18267 18487 . + . ID=g12378.t1.exon3;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . CDS 18267 18487 . + 0 ID=cds.g12378.t1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . exon 18624 18875 . + . ID=g12378.t1.exon4;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . CDS 18624 18786 . + 1 ID=cds.g12378.t1;Parent=g12378.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 18787 18875 . + . ID=g12378.t1.utr3p1;Parent=g12378.t1 #PROT g12378.t1 g12378 MKFAALIFVLALLSGGARAADKVSVALYYESLCPYCEAFITGPLLAAWQAADIQDIMELSLFPYGNAKEAAQGSSYTYTCQHGENECIGNVIETCAISIIKDISVYYPFIECLESSGTPYSNTTAASCAKTVGVDYTPIAACAADDDGVQLEHQMAQATAALNPAHQYVPWIVINGVHTDDLQDKAQDNLIAVVCDQYQGTKPASCSSYIKPTRRVSFNN* # ORIGINAL: g12381.t1 original gene structure, not modified by PASA NODE_268_length_28647_cov_54.533 AUGUSTUS gene 25189 27898 . + . ID=g12381;Name=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS mRNA 25189 27898 . + . ID=g12381.t1;Parent=g12381;Name=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 25189 25366 . + . ID=g12381.t1.exon1;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 25189 25366 . + 0 ID=cds.g12381.t1;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 25584 26012 . + . ID=g12381.t1.exon2;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 25584 26012 . + 2 ID=cds.g12381.t1;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 26438 26769 . + . ID=g12381.t1.exon3;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 26438 26769 . + 2 ID=cds.g12381.t1;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 26976 27301 . + . ID=g12381.t1.exon4;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 26976 27301 . + 0 ID=cds.g12381.t1;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 27595 27898 . + . ID=g12381.t1.exon5;Parent=g12381.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 27595 27898 . + 1 ID=cds.g12381.t1;Parent=g12381.t1 #PROT g12381.t1 g12381 MASGVPTVAFHAVSVFTIRDSTSTPTDGDLVTSLLGRKGSAEIRLSAADIGGSVVLRVADGPTELATAALSVHTGICRMSPRSVLVALPQQPLTVVFANSADSDAFVAWTSERLRPLSSLPPAVASSPSPVAPPASNAAPESHFASKTDATSANQYFHYYGQLLQQQNMLQDLVRTGTYQRAVLENWPDFRGKVVLDVGAGTGILSFFAAQAGARRVYAVEASAMADNTRILAEGNGFGGRVVVLRGKVEEIELPEQVDLIISEPMGTMLVNERMLESFVHARKWLKPGGIMFPSTATLFCAPFTDEYLYMEQFNKTAFWHQRAFFGINMTSLCDRATSETFSQPVVDALDPRLVIAPPVARHFDFATMSESDLHRILMPFTFRPLVTCNVHGLAFWFDVAFKGSQSEVILSTAPTAPLTHWYQLRCMFREPIFSEHGRTMSGSVLMNVNTRQSYDIRVEACVDGTSVRASNVVNLKEPFYRFSGYTPPPAMAGAIAARGGVALDDSGIGGAAFAGSFSDGF* # PASA_UPDATE: g12376.t1, single gene model update, valid-1, status:[pasa:asmbl_4807,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 13647 14639 . + . ID=g12376;Name=g12376.t1 NODE_268_length_28647_cov_54.533 . mRNA 13647 14639 . + . ID=g12376.t1;Parent=g12376;Name=g12376.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 13647 13705 . + . ID=g12376.t1.utr5p1;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . exon 13647 13956 . + . ID=g12376.t1.exon1;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . CDS 13706 13956 . + 0 ID=cds.g12376.t1;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . exon 14065 14216 . + . ID=g12376.t1.exon2;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . CDS 14065 14216 . + 1 ID=cds.g12376.t1;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . exon 14333 14639 . + . ID=g12376.t1.exon3;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . CDS 14333 14544 . + 2 ID=cds.g12376.t1;Parent=g12376.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 14545 14639 . + . ID=g12376.t1.utr3p1;Parent=g12376.t1 #PROT g12376.t1 g12376 MESPRTVDAPKDMEELIARLSDLLDGDEADVDEVMAVMEAYKSNSKDWEKYAHFDPHRYTRNFVDNGNGKFNLLVLAWSEGQSSSVHDHAGSHCIMKILDGEIRETLYDPPKDGVPLNATRVLDYKRDQVTYIHDKIGLHRVENVSHTKGALSLHLYSPPFEFCKTFDEATGRCKASPKVTFFSKKGEIVEYRNGTQHCSASDK* # PASA_UPDATE: g12373.t1, single gene model update, valid-1, status:[pasa:asmbl_4805,status:12],[pasa:asmbl_4811,status:12],[pasa:asmbl_4812,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 1637 5278 . + . ID=g12373;Name=g12373.t1 NODE_268_length_28647_cov_54.533 . mRNA 1637 5278 . + . ID=g12373.t1;Parent=g12373;Name=g12373.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 1637 2194 . + . ID=g12373.t1.utr5p1;Parent=g12373.t1 NODE_268_length_28647_cov_54.533 . exon 1637 3520 . + . ID=g12373.t1.exon1;Parent=g12373.t1 NODE_268_length_28647_cov_54.533 . CDS 2195 3520 . + 0 ID=cds.g12373.t1;Parent=g12373.t1 NODE_268_length_28647_cov_54.533 . exon 3792 5278 . + . ID=g12373.t1.exon2;Parent=g12373.t1 NODE_268_length_28647_cov_54.533 . CDS 3792 4844 . + 0 ID=cds.g12373.t1;Parent=g12373.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 4845 5278 . + . ID=g12373.t1.utr3p1;Parent=g12373.t1 #PROT g12373.t1 g12373 MVAVEQRTVRHMVLLITFVGAVIFLYDEAILATRMSGESVDVDSEEEVLAAAEADLIAQPERRQDWRGLTGTRGGLPGNNTVVFDGAQIRKFVSDLPRDYVVGKNKLLDRLIDIEQTIVEKRRRKPNVIMRGTKWTQKRDMDTYRVSLRRAGLSLVDDGPNMQFSGILCIGIGDLNEDCLEGSQYPMLERHQKISRIQGMRRILWTKDGFCRTMGMALSKYEGAASVPPFSFPCWTVPRQLPALLEFDDVQRIRGNAIKYIVKPTNSGAGRGIFVVDSADPLKRIRHDLIVQPYLNNPYLIDGYKFDLRTYVLVTSISPLRIYMYKEGLVRFASSRYDVNATTGGKKTQFLTNTSINKKFKDVNELVWRFSKFKAYLASVGQDPDIVFARIYQAVTRIFLSSEAAFRRHFEKLQSGYTCINCYQLLGVDVIFDENLTPRIIEVNGSPDMGLSHARGSAYDATKIGMMTDVLNVIYRRASVAVDLAQDLSKIHAEVKTACGASTRFCIDDIDLEYLLDAKRERMNRGGFSRLYPTANGGDYTDYVRHVDSLASDSTLSEVLSDEKVLPRNSRGTWRLHILQTALEKLYEPSESAASKRYKALMHNAIANAQLQQNKLEEEVAAAGKAAAETAGTEEEQVPAAPQAQPLSTKTDGGQANASAGDVSPLKPRDQPPAENTAGGSGGDVGAGKKESAASAGVANALPAVNKKESAASAGVKNALPAVNTKESAASAGVANALSAVNNNAPESMSNGVAVVVAVNPGVDMRNASAKIVPSSGGVALQDKKGKQAGKK* # PASA_UPDATE: g12372.t1, single gene model update, valid-1, status:[pasa:asmbl_4810,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 95 629 . + . ID=g12372;Name=g12372.t1 NODE_268_length_28647_cov_54.533 . mRNA 95 629 . + . ID=g12372.t1;Parent=g12372;Name=g12372.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 95 96 . + . ID=g12372.t1.utr5p1;Parent=g12372.t1 NODE_268_length_28647_cov_54.533 . exon 95 629 . + . ID=g12372.t1.exon1;Parent=g12372.t1 NODE_268_length_28647_cov_54.533 . CDS 97 246 . + 0 ID=cds.g12372.t1;Parent=g12372.t1;5_prime_partial=true NODE_268_length_28647_cov_54.533 . three_prime_UTR 247 629 . + . ID=g12372.t1.utr3p1;Parent=g12372.t1 #PROT g12372.t1 g12372 RYGCSYMIVGEDRFYFHVSSKKACPETDSVRFCKQIEIALKDMREIFTP* # ORIGINAL: g12375.t1 original gene structure, not modified by PASA NODE_268_length_28647_cov_54.533 AUGUSTUS gene 11272 13025 . + . ID=g12375;Name=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS mRNA 11272 13025 . + . ID=g12375.t1;Parent=g12375;Name=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 11272 11374 . + . ID=g12375.t1.exon1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 11272 11374 . + 0 ID=cds.g12375.t1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 11512 11687 . + . ID=g12375.t1.exon2;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 11512 11687 . + 2 ID=cds.g12375.t1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 11863 12207 . + . ID=g12375.t1.exon3;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 11863 12207 . + 0 ID=cds.g12375.t1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 12395 12497 . + . ID=g12375.t1.exon4;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 12395 12497 . + 0 ID=cds.g12375.t1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 12637 12755 . + . ID=g12375.t1.exon5;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 12637 12755 . + 2 ID=cds.g12375.t1;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS exon 12864 13025 . + . ID=g12375.t1.exon6;Parent=g12375.t1 NODE_268_length_28647_cov_54.533 AUGUSTUS CDS 12864 13025 . + 0 ID=cds.g12375.t1;Parent=g12375.t1 #PROT g12375.t1 g12375 MGTVAHSRPASAFDYSRGPVVEEYLVDDIRLPIKVMIHIKPETRGERQQGAPNGDAVANGLMGRIFAAAREMQAHDDDATKKAVAVEALALVKYYYAAEDFLAAEKVLRNIIPLVQNNPLALSQLREAVLYWNALDEFRRMRAKHRVNAQSLREWEIRKKSEERPPQNNSSEGDGEDDDTDVIFGGSLSKDMPAWDAAVGMNSIGTEESLYRAGRESDESAASTSDKPSLAAILKRTDEWIDAADCIVGYKEGLKDVFAAFTNGGSDKDKETAIGHALRVAKSLQTLGLDVEAVAVMRQFGNAVQTAQPKHSKASRRHSGHRQPGHIATPIVVED* # PASA_UPDATE: g12380.t1, single gene model update, valid-1, status:[pasa:asmbl_4819,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 21684 24662 . - . ID=g12380;Name=g12380.t1 NODE_268_length_28647_cov_54.533 . mRNA 21684 24662 . - . ID=g12380.t1;Parent=g12380;Name=g12380.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 24556 24662 . - . ID=g12380.t1.utr5p1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . exon 24495 24662 . - . ID=g12380.t1.exon1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . CDS 24495 24555 . - 0 ID=cds.g12380.t1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . exon 24099 24204 . - . ID=g12380.t1.exon2;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . CDS 24099 24204 . - 2 ID=cds.g12380.t1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . exon 23644 23899 . - . ID=g12380.t1.exon3;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . CDS 23644 23899 . - 1 ID=cds.g12380.t1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . exon 23027 23158 . - . ID=g12380.t1.exon4;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . CDS 23027 23158 . - 0 ID=cds.g12380.t1;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . exon 21684 22370 . - . ID=g12380.t1.exon5;Parent=g12380.t1 NODE_268_length_28647_cov_54.533 . CDS 21684 22370 . - 0 ID=cds.g12380.t1;Parent=g12380.t1 #PROT g12380.t1 g12380 MAECSSCDKALSPAQIVRVDGSVMCKACADELNAVISSAMSGAHAMFSGGSPKPQSKSAQPSHSFLSQSQGARTVPQQQQQQQQSRPSGVSAAFSNSSSPSQAQWNQPTQSFSRSMPSQQSPQSQQQQAVRGAVSPKGSTPFKTSNPNVTADLFRSTIEVAEKVDRDHKERLERETRERMAREYKEHKLKEECERRALVEKNEREDREKKDREERERKEREERERKEREERDKNEREERDRKERDEKERKERDAKEQLRQQMEEAEKKEREDREKKEREEREKKEREEREKREKEDKERRAHEAKERRESEERAKRERDERDRREREAQECREREERESRERREAELQRVSAGASSSAPEADTAIMHARMQQLESDSRKAEESLRAAEASLSAASDRAAKAMERAVALGVHFG* # PASA_UPDATE: g12374.t1, single gene model update, valid-1, status:[pasa:asmbl_4813,status:12],[pasa:asmbl_4814,status:12],[pasa:asmbl_4818,status:12], valid-1 NODE_268_length_28647_cov_54.533 . gene 8042 10256 . - . ID=g12374;Name=g12374.t1 NODE_268_length_28647_cov_54.533 . mRNA 8042 10256 . - . ID=g12374.t1;Parent=g12374;Name=g12374.t1 NODE_268_length_28647_cov_54.533 . five_prime_UTR 10025 10256 . - . ID=g12374.t1.utr5p1;Parent=g12374.t1 NODE_268_length_28647_cov_54.533 . exon 8596 10256 . - . ID=g12374.t1.exon1;Parent=g12374.t1 NODE_268_length_28647_cov_54.533 . CDS 8596 10024 . - 0 ID=cds.g12374.t1;Parent=g12374.t1 NODE_268_length_28647_cov_54.533 . exon 8042 8330 . - . ID=g12374.t1.exon2;Parent=g12374.t1 NODE_268_length_28647_cov_54.533 . CDS 8158 8330 . - 2 ID=cds.g12374.t1;Parent=g12374.t1 NODE_268_length_28647_cov_54.533 . three_prime_UTR 8042 8157 . - . ID=g12374.t1.utr3p1;Parent=g12374.t1 #PROT g12374.t1 g12374 MSRLAPFGTVDQPDFRVRIIGGRQVLVPNSGLAAAPPTNGPPSRSQSPSQSRYGGQPTGNARHPLGGSSERQSRLNPITGLPYGGLDALPTVPAFTNRYAPLGNVPDATDRHSQQAQQPQHHPQQQHGSHQTGGVGGRDYGYQAPDSRYGQAPAKDPYASAPPQDDWGTSNGRVGTTGATAYKALPSIGQQDDRYGYNAPATNRDAPAQRGVFQDNGGYGRPTDRGSQDAYGSGAHANLTSKQPAYAQQGAQQQQQQAVTSRTTRGGGTSYPWSQETGQQSQIPPQANSSRGWPQQQQQQQHQQPQQQRQQSQNGYGQRSQQYADVPVSATRGDMTDRSERHNAMPSAVGYPSGGQSFGGRPTRLDDLQRQQEQLIQLRRQNDDLLSHNGALIDESPHGFASAGSSRYSEDSTPMGIEHRDGMRSHIDRGGRQYGGTYPTDESMWRKGNAIPPEDDRLDRFASLYNALRQSDAEGTGYLDLHEARRLIETYNLVYSLGIPQSILGALFGAVNPNVGMVSIDDVVARLETQAAR* # ORIGINAL: g6523.t1 original gene structure, not modified by PASA NODE_1319_length_12134_cov_41.6744 AUGUSTUS gene 2984 4625 . + . ID=g6523;Name=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS mRNA 2984 4625 . + . ID=g6523.t1;Parent=g6523;Name=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 2984 3168 . + . ID=g6523.t1.exon1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 2984 3168 . + 0 ID=cds.g6523.t1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 3308 3468 . + . ID=g6523.t1.exon2;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 3308 3468 . + 1 ID=cds.g6523.t1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 3567 3642 . + . ID=g6523.t1.exon3;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 3567 3642 . + 2 ID=cds.g6523.t1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 3789 3840 . + . ID=g6523.t1.exon4;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 3789 3840 . + 1 ID=cds.g6523.t1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 3924 4061 . + . ID=g6523.t1.exon5;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 3924 4061 . + 0 ID=cds.g6523.t1;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS exon 4194 4625 . + . ID=g6523.t1.exon6;Parent=g6523.t1 NODE_1319_length_12134_cov_41.6744 AUGUSTUS CDS 4194 4625 . + 0 ID=cds.g6523.t1;Parent=g6523.t1 #PROT g6523.t1 g6523 MDGTASSALGDPGFDLSGHDVLDIIGKRLRSPERRNTKGCSVAADGDAIIATDHDRKRRKGIDTTNVHDMLRQINPTEVCGGLDGYFKCFEAVANTIMNHSILLIGASPHRICEIEFYVNTEEHADVQCHCEDLQLSAGHWYFHRKGAPFRTGTSQGVDITCGGPGMDGDAKQWYGGINVRSIQQLSDGKLICGPSLCVDHMIKTAGVSKTGDLVGTRGLIDDTDAVVHIVPDRGGVLSPARIHSSPRIGLTLKALRDPERYIMRPYRFLIMPDRLKKGKQHLMLQMHVAGASAGDVKTTCGVAQPVYARTIALFEEGKTMPFDSFIAKNLSPDDFCRMYGAHIASL* # PASA_UPDATE: g6526.t1, single gene model update, valid-1, status:[pasa:asmbl_1185,status:12],[pasa:asmbl_1187,status:12], valid-1 NODE_1319_length_12134_cov_41.6744 . gene 9033 11451 . + . ID=g6526;Name=g6526.t1 NODE_1319_length_12134_cov_41.6744 . mRNA 9033 11451 . + . ID=g6526.t1;Parent=g6526;Name=g6526.t1 NODE_1319_length_12134_cov_41.6744 . five_prime_UTR 9033 9092 . + . ID=g6526.t1.utr5p1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . exon 9033 9282 . + . ID=g6526.t1.exon1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . CDS 9093 9282 . + 0 ID=cds.g6526.t1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . exon 9650 9733 . + . ID=g6526.t1.exon2;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . CDS 9650 9733 . + 2 ID=cds.g6526.t1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . exon 9956 10048 . + . ID=g6526.t1.exon3;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . CDS 9956 10048 . + 2 ID=cds.g6526.t1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . exon 10477 10532 . + . ID=g6526.t1.exon4;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . CDS 10477 10532 . + 2 ID=cds.g6526.t1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . exon 10822 11451 . + . ID=g6526.t1.exon5;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . CDS 10822 11241 . + 0 ID=cds.g6526.t1;Parent=g6526.t1 NODE_1319_length_12134_cov_41.6744 . three_prime_UTR 11242 11451 . + . ID=g6526.t1.utr3p1;Parent=g6526.t1 #PROT g6526.t1 g6526 MKGGYAHRNGGVARQPILVVAVVSVVILYCSYKMWDMSGTIRTLREEVLALSDSHERCMAEVNDMTSKKQDAEMRFQRTSDQFLEMRQSFEACSKNLHQSTEAKMDAEAKMGTVLADIQRVKISLTDTEGKLSKCTQDEARLTEVLEAKEEELATCKDELSTSQQQARLYEGQVEKQRANLNDCLRNLDDVAQKEDVHKESHVEGGGAGAAAVNAEAPNGQANTDGETGPDSGAEEDQHPEGNGANGAAPQDNDDNDGAAPDPDAADDNEKASEEEPEVI* # PASA_UPDATE: g6524.t1, single gene model update, valid-1, status:[pasa:asmbl_1184,status:3], valid-1 NODE_1319_length_12134_cov_41.6744 . gene 4960 6610 . + . ID=g6524;Name=g6524.t1 NODE_1319_length_12134_cov_41.6744 . mRNA 4960 6610 . + . ID=g6524.t1;Parent=g6524;Name=g6524.t1 NODE_1319_length_12134_cov_41.6744 . five_prime_UTR 4960 5011 . + . ID=g6524.t1.utr5p1;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . exon 4960 5017 . + . ID=g6524.t1.exon1;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . CDS 5012 5017 . + 0 ID=cds.g6524.t1;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . exon 5423 5487 . + . ID=g6524.t1.exon2;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . CDS 5423 5487 . + 0 ID=cds.g6524.t1;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . exon 5765 6610 . + . ID=g6524.t1.exon3;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . CDS 5765 6413 . + 1 ID=cds.g6524.t1;Parent=g6524.t1 NODE_1319_length_12134_cov_41.6744 . three_prime_UTR 6414 6610 . + . ID=g6524.t1.utr3p1;Parent=g6524.t1 #PROT g6524.t1 g6524 MKLNISNPSTGCQKTIEIEDERKVRAFYDKRISQEVSGDSLGDEFKGYVFRISGGNDKQGFAMVQGVLTNGRVRLLLSKGHKSYRPRRAGERKRKSVRGCIVDSNLSVLNLVVVKKGEQELPGITDATAPRRLGPKRASHIRKLFNLTKDDDVRKFVIRRKITREGKKEYSKAPKIQRLVTPVTLQRKRHRVALKKERATKAKELAADYAKLLAKRTKEAKERRHEHVKKRRQSSSTKA* # PASA_UPDATE: g6525.t1, single gene model update, valid-1, status:[pasa:asmbl_1189,status:12], valid-1 NODE_1319_length_12134_cov_41.6744 . gene 6654 8607 . - . ID=g6525;Name=g6525.t1 NODE_1319_length_12134_cov_41.6744 . mRNA 6654 8607 . - . ID=g6525.t1;Parent=g6525;Name=g6525.t1 NODE_1319_length_12134_cov_41.6744 . five_prime_UTR 8560 8607 . - . ID=g6525.t1.utr5p1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 8455 8607 . - . ID=g6525.t1.exon1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 8455 8559 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 8286 8342 . - . ID=g6525.t1.exon2;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 8286 8342 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 8180 8200 . - . ID=g6525.t1.exon3;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 8180 8200 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 7819 8064 . - . ID=g6525.t1.exon4;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 7819 8064 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 7412 7688 . - . ID=g6525.t1.exon5;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 7412 7688 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 7136 7326 . - . ID=g6525.t1.exon6;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 7136 7326 . - 2 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . exon 6654 6861 . - . ID=g6525.t1.exon7;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . CDS 6661 6861 . - 0 ID=cds.g6525.t1;Parent=g6525.t1 NODE_1319_length_12134_cov_41.6744 . three_prime_UTR 6654 6660 . - . ID=g6525.t1.utr3p1;Parent=g6525.t1 #PROT g6525.t1 g6525 MNALVLSKLEEEDAEGHKYALTLRRVDVPVPLPGQALVRICAASLNRRDEWIQLGLYPRIQAGSILGSDGAGIVEKVGSGVESVWVGRRVVIDASVNWGDDPAAPNERYAILGLLPLPGTFAQYACVAVSQLHELPAHVTMEQAATLPVAGLTGFRALFTKGSVHLTAPARAQSRGGHVHRPRVLVTGIGGGVALLALQFAVASGNVTVFVTSSSDAKICSAIALGAAGGFNYKNEGWERDAIKKAGGLFDVVIDGSGGESMNSYIRLLALGGRLVTYGATAGFAPPVDIPRLFLKNAEIRGTTMGNEREFRDMMALVERAKITPVVAHTLPLEQYADAFALFRKSEQFGKIVLRIAPDPTRAHH* # PASA_UPDATE: g6522.t1, single gene model update, valid-1, status:[pasa:asmbl_1186,status:12],[pasa:asmbl_1188,status:12], valid-1 NODE_1319_length_12134_cov_41.6744 . gene 601 2537 . - . ID=g6522;Name=g6522.t1 NODE_1319_length_12134_cov_41.6744 . mRNA 601 2537 . - . ID=g6522.t1;Parent=g6522;Name=g6522.t1 NODE_1319_length_12134_cov_41.6744 . five_prime_UTR 2314 2537 . - . ID=g6522.t1.utr5p1;Parent=g6522.t1 NODE_1319_length_12134_cov_41.6744 . exon 823 2537 . - . ID=g6522.t1.exon1;Parent=g6522.t1 NODE_1319_length_12134_cov_41.6744 . CDS 823 2313 . - 0 ID=cds.g6522.t1;Parent=g6522.t1 NODE_1319_length_12134_cov_41.6744 . exon 601 702 . - . ID=g6522.t1.exon2;Parent=g6522.t1 NODE_1319_length_12134_cov_41.6744 . CDS 601 702 . - 0 ID=cds.g6522.t1;Parent=g6522.t1 #PROT g6522.t1 g6522 MSDVHPHALDTSQGSFQSSLSADPVELRSFDSRSSATEHYDSVGHPDGSLRRRLSVSYTDPQTSPSELRDVVDGVMRSDKALRHSPSLTSLRSLNLRSALKKSASTKSVSIADVVTNVTIKHDALDDVSVTRLRADSYAAAQADASGPQLANNIEYNGLLHLPQTLPSIQVRRGSAVALLCAPDAVSEGIMRGVCDHVTAIATLQQQRRRSVTLEGAPLASASGVFYRGRRNSADVGEIAIEMDGAVGPGSSTEGTDGTFIPSSGAAKDCLTGGGEGAGDGNVCELSRDVVDAPHPVMQARRSSLFQKLHLHAPDVESWESWSFNVWGNPTESNIALGVRMFANLGALETLHVTPAQIGRFLRDVHRGYHPNPYHNFDHAMDVMQTCYVFLRAMRASEMLSHLDVAVLLLAAAGHDIDHPGVTNDYLVKSSDPLAMLYNDVSVLENHHAACLWQLIRKHSLLVALPPDTVRLARKKIVDAVLNTDMARHFVLVSKLQAFVTENELSSDSAAFGSRVNPRKKLEGGGGPCT* # PASA_UPDATE: g1606.t1, single gene model update, valid-1, status:[pasa:asmbl_1540,status:12], valid-1 NODE_1420_length_11451_cov_41.3674 . gene 5458 7391 . - . ID=g1606;Name=g1606.t1 NODE_1420_length_11451_cov_41.3674 . mRNA 5458 7391 . - . ID=g1606.t1;Parent=g1606;Name=g1606.t1 NODE_1420_length_11451_cov_41.3674 . five_prime_UTR 7280 7391 . - . ID=g1606.t1.utr5p1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . exon 7141 7391 . - . ID=g1606.t1.exon1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . CDS 7141 7279 . - 0 ID=cds.g1606.t1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . exon 6876 6987 . - . ID=g1606.t1.exon2;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . CDS 6876 6987 . - 2 ID=cds.g1606.t1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . exon 6285 6444 . - . ID=g1606.t1.exon3;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . CDS 6285 6444 . - 1 ID=cds.g1606.t1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . exon 5458 5717 . - . ID=g1606.t1.exon4;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . CDS 5514 5717 . - 0 ID=cds.g1606.t1;Parent=g1606.t1 NODE_1420_length_11451_cov_41.3674 . three_prime_UTR 5458 5513 . - . ID=g1606.t1.utr3p1;Parent=g1606.t1 #PROT g1606.t1 g1606 MEVPADVLQGLGLAGESKYFGDAAFGALVDFAFAVVLRKATEGSIEESKHFASTDKSILKKAYSSLVGTILEAARRNTGDTEFGSFLEDSKIGGTRQQHFATRYALFRAEIRALLATTSFSFPHVVDVDWRLDYNVKNNQVERVDQPVFLVSLRTEGNNGAAGKPVEFSCSVDQLQDIVNRLKEACKVVERAEGDKPEEKGRKK* # PASA_UPDATE: g1608.t1, single gene model update, valid-1, status:[pasa:asmbl_1541,status:3], valid-1 # PASA_UPDATE: g1608.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1542,status:12], valid-1 NODE_1420_length_11451_cov_41.3674 . gene 8197 11369 . - . ID=g1608;Name=g1608.t1 NODE_1420_length_11451_cov_41.3674 . mRNA 8197 11369 . - . ID=g1608.t1;Parent=g1608;Name=g1608.t1 NODE_1420_length_11451_cov_41.3674 . five_prime_UTR 11253 11369 . - . ID=g1608.t1.utr5p1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . exon 11125 11369 . - . ID=g1608.t1.exon1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . CDS 11125 11252 . - 0 ID=cds.g1608.t1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . exon 10808 10995 . - . ID=g1608.t1.exon2;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . CDS 10808 10995 . - 1 ID=cds.g1608.t1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . exon 10443 10619 . - . ID=g1608.t1.exon3;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . CDS 10443 10619 . - 2 ID=cds.g1608.t1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . exon 9855 10019 . - . ID=g1608.t1.exon4;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . CDS 9855 10019 . - 2 ID=cds.g1608.t1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . exon 8197 9662 . - . ID=g1608.t1.exon5;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . CDS 9409 9662 . - 2 ID=cds.g1608.t1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . three_prime_UTR 8197 9408 . - . ID=g1608.t1.utr3p1;Parent=g1608.t1 NODE_1420_length_11451_cov_41.3674 . mRNA 8197 11369 . - . ID=g1608.t1.1.5b6be70a;Parent=g1608;Name=g1608.t1 NODE_1420_length_11451_cov_41.3674 . five_prime_UTR 11253 11369 . - . ID=g1608.t1.1.5b6be70a.utr5p1;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 11125 11369 . - . ID=g1608.t1.1.5b6be70a.exon1;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 11125 11252 . - 0 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 10808 10995 . - . ID=g1608.t1.1.5b6be70a.exon2;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 10808 10995 . - 1 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 10443 10619 . - . ID=g1608.t1.1.5b6be70a.exon3;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 10443 10619 . - 2 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 9855 10019 . - . ID=g1608.t1.1.5b6be70a.exon4;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 9855 10019 . - 2 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 9440 9662 . - . ID=g1608.t1.1.5b6be70a.exon5;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 9440 9662 . - 2 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . exon 8197 9303 . - . ID=g1608.t1.1.5b6be70a.exon6;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . CDS 9108 9303 . - 1 ID=cds.g1608.t1.1.5b6be70a;Parent=g1608.t1.1.5b6be70a NODE_1420_length_11451_cov_41.3674 . three_prime_UTR 8197 9107 . - . ID=g1608.t1.1.5b6be70a.utr3p1;Parent=g1608.t1.1.5b6be70a #PROT g1608.t1 g1608 MDTIDVSNLNRQFLFRPHDVGKSKAIAAAAFINARVAGCTVTPYFCKIQDMEEDFYRSFHVVVCGLDSIIARRWINATLFSLLAVDDDGNVQPDTIVPMIDGGTEGFKGQARVIFPGMSSCFECSLDAFPPQVTYPMCTIANTPRLPQHCIEYAKIVQWPKEFPDTPLDGDDPQHIQWLFDKASQRAAEYGISGVTYRLTQGVVKNIIPAVASTNAVIAAACANECFKIATSSHAYLNNYMMFNGLDGLYTYTFEYERKPDCLVCGGSVIRFECDPDNTTVEQFIERLGTDLRLYPHAALFAR* #PROT g1608.t1.1.5b6be70a g1608 MDTIDVSNLNRQFLFRPHDVGKSKAIAAAAFINARVAGCTVTPYFCKIQDMEEDFYRSFHVVVCGLDSIIARRWINATLFSLLAVDDDGNVQPDTIVPMIDGGTEGFKGQARVIFPGMSSCFECSLDAFPPQVTYPMCTIANTPRLPQHCIEYAKIVQWPKEFPDTPLDGDDPQHIQWLFDKASQRAAEYGISGVTYRLTQGVVKNIIPAVASTNAVIAAACANECFKIATSSHAYLNNYMMFNGLDGLYTYTFEYERKPDCLVCGGSVIRFECDPDNTTVEQFIERLGTDLRFQMRAPGIRFSGTTIYMAAPESIERATRKNLPQTLSSLGIALGAILTITDGAIPKPLSMQIVASA* # ORIGINAL: g1607.t1 original gene structure, not modified by PASA NODE_1420_length_11451_cov_41.3674 AUGUSTUS gene 7751 8941 . + . ID=g1607;Name=g1607.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS mRNA 7751 8941 . + . ID=g1607.t1;Parent=g1607;Name=g1607.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 7751 8941 . + . ID=g1607.t1.exon1;Parent=g1607.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 7751 8941 . + 0 ID=cds.g1607.t1;Parent=g1607.t1 #PROT g1607.t1 g1607 MASNRYLACLALAFLAIAAEGRGMHGSSVTSGRSGASGASGSHVHIAPRSSSGHTTAETTTSHSLRDIGHQAEGAQDGDPGTHPACDRPSASSPRPLACIALCNYLAIGCRGRVPGASECSDGEMSLWAGGIASHRRMCDAALDAIVAEHGVVEGAQMNGGEKRAGHPRSDAPHPTETHVAARREHFAPADSFAADAGGAVPVGGGVPVGGGVPADAVDVVVVDTERDESSRGASSSVLSLFPAHSGTAPSSVGHHAHPAPSASTVPARGSASGHTPAVSASRERKGDAKGKGKGSGKKASKHDGLHLAPDPDGANDAKKDTPRQYLGGGSGAPGVQSVAGREDAPPSVHASATGAGYCSKDGRRCEKAGRLGRKYTKGIERDKDGGGGKKGKNKR* # ORIGINAL: g1605.t1 original gene structure, not modified by PASA NODE_1420_length_11451_cov_41.3674 AUGUSTUS gene 2024 5200 . + . ID=g1605;Name=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS mRNA 2024 5200 . + . ID=g1605.t1;Parent=g1605;Name=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 2024 2098 . + . ID=g1605.t1.exon1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 2024 2098 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 2404 2491 . + . ID=g1605.t1.exon2;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 2404 2491 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 2594 2682 . + . ID=g1605.t1.exon3;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 2594 2682 . + 2 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 3092 3166 . + . ID=g1605.t1.exon4;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 3092 3166 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 3546 3614 . + . ID=g1605.t1.exon5;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 3546 3614 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 3952 3988 . + . ID=g1605.t1.exon6;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 3952 3988 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 4336 4499 . + . ID=g1605.t1.exon7;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 4336 4499 . + 2 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 4796 4938 . + . ID=g1605.t1.exon8;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 4796 4938 . + 0 ID=cds.g1605.t1;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS exon 5086 5200 . + . ID=g1605.t1.exon9;Parent=g1605.t1 NODE_1420_length_11451_cov_41.3674 AUGUSTUS CDS 5086 5200 . + 1 ID=cds.g1605.t1;Parent=g1605.t1 #PROT g1605.t1 g1605 MGKRRLNGCGYAAKVILTVVNLVFMAGGVALIGLGAYTAQKEHVSALRPFSVPTALIILGSVVCLMSFLGGFGVARENPCMLKTYFSILLVVVAKQIILGAMAYRYRGHLYEELRDSWEKATVATRNSIETEFKCCGFDSKADVGSFPIMSQSGEDVCIEPRSAPFDSFGDGCFTRIRDEVVHHSLVAEIAGFALASVELVGLVLTWILLAAIAESEWASVQGEDTRLLSGERRPGDHVPDRRATVWEIPTTDGSAQTHLKVESHPDGDGGCRTPLYPSTAYLL* # PASA_UPDATE: g11820.t1, single gene model update, valid-1, status:[pasa:asmbl_4559,status:12], valid-1 NODE_2560_length_5890_cov_40.5945 . gene 4305 5507 . - . ID=g11820;Name=g11820.t1 NODE_2560_length_5890_cov_40.5945 . mRNA 4305 5507 . - . ID=g11820.t1;Parent=g11820;Name=g11820.t1 NODE_2560_length_5890_cov_40.5945 . exon 5149 5507 . - . ID=g11820.t1.exon1;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . CDS 5149 5507 . - 0 ID=cds.g11820.t1;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . exon 4789 4922 . - . ID=g11820.t1.exon2;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . CDS 4789 4922 . - 1 ID=cds.g11820.t1;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . exon 4305 4514 . - . ID=g11820.t1.exon3;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . CDS 4390 4514 . - 2 ID=cds.g11820.t1;Parent=g11820.t1 NODE_2560_length_5890_cov_40.5945 . three_prime_UTR 4305 4389 . - . ID=g11820.t1.utr3p1;Parent=g11820.t1 #PROT g11820.t1 g11820 MDPSYSRKPTIDLSKPRDASAGALSDKEKYFALIARDGERRLREGDRAARDKDSWEDAASGLTDAIDDGGNGDAVTSGAVQADKTKPSLLRSTQMRIALTLFGATFFTVSVFGSYIIPRRLITSIIVYRGGQKVRVSTFALRGLQHYEVPAASVRPSRSLESAKALDKPIWLTIKGHPVPFLLRTDVGFLDPASYEIAIGPNVAK* # PASA_UPDATE: g11819.t1, single gene model update, valid-1, status:[pasa:asmbl_4558,status:12], valid-1 NODE_2560_length_5890_cov_40.5945 . gene 110 4298 . + . ID=g11819;Name=g11819.t1 NODE_2560_length_5890_cov_40.5945 . mRNA 110 4298 . + . ID=g11819.t1;Parent=g11819;Name=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 110 226 . + . ID=g11819.t1.exon1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 110 226 . + 0 ID=cds.g11819.t1;Parent=g11819.t1;5_prime_partial=true NODE_2560_length_5890_cov_40.5945 . exon 468 611 . + . ID=g11819.t1.exon2;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 468 611 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 766 852 . + . ID=g11819.t1.exon3;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 766 852 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 1110 1253 . + . ID=g11819.t1.exon4;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 1110 1253 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 1551 1799 . + . ID=g11819.t1.exon5;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 1551 1799 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 2047 2210 . + . ID=g11819.t1.exon6;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 2047 2210 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 2396 2521 . + . ID=g11819.t1.exon7;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 2396 2521 . + 1 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 2690 2908 . + . ID=g11819.t1.exon8;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 2690 2908 . + 1 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 3228 3321 . + . ID=g11819.t1.exon9;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 3228 3321 . + 1 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 3476 3607 . + . ID=g11819.t1.exon10;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 3476 3607 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . exon 3876 4298 . + . ID=g11819.t1.exon11;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . CDS 3876 4019 . + 0 ID=cds.g11819.t1;Parent=g11819.t1 NODE_2560_length_5890_cov_40.5945 . three_prime_UTR 4020 4298 . + . ID=g11819.t1.utr3p1;Parent=g11819.t1 #PROT g11819.t1 g11819 SERDTLLDEAAFTSTLLSDANAAVEEGKRRIAALQNDLETALVAASEAEERLSATAATTDGRLRDALAEAHELRAELQRHVHAADERTKEAAILRALIDGHVRVIEEMKNASADDKMALADMVSTATHLRSVATEAAAEKESLSIELDETKQALREACAVAETEKCNFNDKISALEASLAEYVAALERADADAHTRNQAENAQRDTLVSELSAANERARALAGEIDRLSREYDGLLAESTKSSSDVAASHDAVVADLRTRLDSAEMRLMAATAESSDSQRMLDEQCVALQASLDVQTAEVTRLRHEQKQFAKMCGEWEDMRTEKNREIQALREKVEGAQEVERRLVSALADAEAASARARASEQRVAAAELLAAKTQSEHRILTAELADLRSTVARQEINLEGAYDDAERMAEDLERAKATERQMFLEREEARSALERTNEERIREKQEREKMEARVEQLARENALLVGHANPKQKIQHHLKIKEENNELKERLAKLISDFKVKSDHVVRVEAELKRLRGGAVSEENKENAANTAAIAH* # PASA_UPDATE: g12353.t1, single gene model update, valid-1, status:[pasa:asmbl_8410,status:3], valid-1 # PASA_UPDATE: g12353.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8411,status:3], valid-1 NODE_59_length_47791_cov_40.5281 . gene 31391 36835 . + . ID=g12353;Name=g12353.t1 NODE_59_length_47791_cov_40.5281 . mRNA 31391 36835 . + . ID=g12353.t1;Parent=g12353;Name=g12353.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 31391 31673 . + . ID=g12353.t1.utr5p1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 31391 31906 . + . ID=g12353.t1.exon1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 31674 31906 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 32028 32139 . + . ID=g12353.t1.exon2;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 32028 32139 . + 1 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 32260 32507 . + . ID=g12353.t1.exon3;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 32260 32507 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 32731 32851 . + . ID=g12353.t1.exon4;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 32731 32851 . + 1 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 33142 33228 . + . ID=g12353.t1.exon5;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 33142 33228 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 33698 35491 . + . ID=g12353.t1.exon6;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 33698 35491 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 35837 35974 . + . ID=g12353.t1.exon7;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 35837 35974 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . exon 36175 36835 . + . ID=g12353.t1.exon8;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . CDS 36175 36582 . + 0 ID=cds.g12353.t1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 36583 36835 . + . ID=g12353.t1.utr3p1;Parent=g12353.t1 NODE_59_length_47791_cov_40.5281 . mRNA 31391 36835 . + . ID=g12353.t1.1.5b6be70c;Parent=g12353;Name=g12353.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 31391 31673 . + . ID=g12353.t1.1.5b6be70c.utr5p1;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 31391 31906 . + . ID=g12353.t1.1.5b6be70c.exon1;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 31674 31906 . + 0 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 32028 32139 . + . ID=g12353.t1.1.5b6be70c.exon2;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 32028 32139 . + 1 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 32260 32507 . + . ID=g12353.t1.1.5b6be70c.exon3;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 32260 32507 . + 0 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 32731 32851 . + . ID=g12353.t1.1.5b6be70c.exon4;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 32731 32851 . + 1 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 33142 33228 . + . ID=g12353.t1.1.5b6be70c.exon5;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 33142 33228 . + 0 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 33698 35491 . + . ID=g12353.t1.1.5b6be70c.exon6;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 33698 35491 . + 0 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . exon 35837 36835 . + . ID=g12353.t1.1.5b6be70c.exon7;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . CDS 35837 36076 . + 0 ID=cds.g12353.t1.1.5b6be70c;Parent=g12353.t1.1.5b6be70c NODE_59_length_47791_cov_40.5281 . three_prime_UTR 36077 36835 . + . ID=g12353.t1.1.5b6be70c.utr3p1;Parent=g12353.t1.1.5b6be70c #PROT g12353.t1 g12353 MEPSGQYIHTDGQSEGQYHSQHSPTGHPLSPIAPPALLCPYCRLPFVDPRILECNHSFCERDLIPLVKDGGVVCPLCRHQTQLDVHSTLRRDDLLLFLLESQDSTEGTQCENCEKNSAEHFCGTCIALLCEECREATHSAKLFARHEMAPASSRNGAMAASVRCPLHDRPIELFCLEDSQLLCVGCFLDGDHREHQGRCVDLDAAHRIAQERLSRSIETVADLAEAVRNAIVSLRRLKSETEDNMRRSHSQVDRLCDELMARIRACKESLLSDVKGQRDRKSAAFDSQLMQLESLLPKIELALAACEHVTHVTNATHAIHAQTNGNQASDAGRRRTESMRSLSLSMHDDDGDRRLSLGGLNSATAATTPVRRPRLLEIYRPLIERLDGVCGLSCGLIPSESSKIVCDATEEFGKALSPVIALVDGDALLPSGVSSASRFDGLHGHGSHTHTHAHPHTQNHNHAAQSIGGDAGAGQKAIGRQSTSHIESVAVGRIVASEFGYDGMSQIENVLQNHIASVQQQQHGKHLSGHAHTTHSPMRTQKSSGQLVGASGSPVTMSSPPASSSHHSVGGASTTSPQASDGRGASAQSPQSRKKSAVAMASDGAERRASEPSPSSNVHKANMASKDRRKSSEAVTAATRDMGASALCVELGDGLSQRENMSVVSASASSACEITHGMREPISHFVVDEASDSVTHGTAQGPDASARHGGHAVMHGGDGSAHAHTHLQHQHQHQQSQQHMHSNGGSGKAQGPAWIGDYSHISPGSSLNGNSSMGLLNGSGGGMGLLNGSGGTGSIPHGSMRRRVNSTSLDPIGAGLGLESVFAEHVGQFGAFMDRTQTRIVSLRATVQELHRDITKRKCQPRAAQILEAVGECRSLESEIEMQSSASKRLFPVFQDMWSARLAALANEQQQFNRQQDMLATSRDENTQLSQVLLNIQAFAQSGIIGMGGTSGPNPQQLQALLQSNGFVSTSAAAAAMLEEQWHNENGNVTAILERIRVLNPDSRQRLESIRLASELRQNEQSLMNNGMEETLRETRTKLRKTQDAQ* #PROT g12353.t1.1.5b6be70c g12353 MEPSGQYIHTDGQSEGQYHSQHSPTGHPLSPIAPPALLCPYCRLPFVDPRILECNHSFCERDLIPLVKDGGVVCPLCRHQTQLDVHSTLRRDDLLLFLLESQDSTEGTQCENCEKNSAEHFCGTCIALLCEECREATHSAKLFARHEMAPASSRNGAMAASVRCPLHDRPIELFCLEDSQLLCVGCFLDGDHREHQGRCVDLDAAHRIAQERLSRSIETVADLAEAVRNAIVSLRRLKSETEDNMRRSHSQVDRLCDELMARIRACKESLLSDVKGQRDRKSAAFDSQLMQLESLLPKIELALAACEHVTHVTNATHAIHAQTNGNQASDAGRRRTESMRSLSLSMHDDDGDRRLSLGGLNSATAATTPVRRPRLLEIYRPLIERLDGVCGLSCGLIPSESSKIVCDATEEFGKALSPVIALVDGDALLPSGVSSASRFDGLHGHGSHTHTHAHPHTQNHNHAAQSIGGDAGAGQKAIGRQSTSHIESVAVGRIVASEFGYDGMSQIENVLQNHIASVQQQQHGKHLSGHAHTTHSPMRTQKSSGQLVGASGSPVTMSSPPASSSHHSVGGASTTSPQASDGRGASAQSPQSRKKSAVAMASDGAERRASEPSPSSNVHKANMASKDRRKSSEAVTAATRDMGASALCVELGDGLSQRENMSVVSASASSACEITHGMREPISHFVVDEASDSVTHGTAQGPDASARHGGHAVMHGGDGSAHAHTHLQHQHQHQQSQQHMHSNGGSGKAQGPAWIGDYSHISPGSSLNGNSSMGLLNGSGGGMGLLNGSGGTGSIPHGSMRRRVNSTSLDPIGAGLGLESVFAEHVGQFGAFMDRTQTRIVSLRATVQELHRDITKRKCQPRAAQILEAVGECRSLESEIEMQSSASKRLFPVFQDMWSARLAALANEQQQVCMRADPCSARRNFDRFADDCFVCICLCACGCV* # ORIGINAL: g12354.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 37340 38647 . - . ID=g12354;Name=g12354.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 37340 38647 . - . ID=g12354.t1;Parent=g12354;Name=g12354.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 37340 38647 . - . ID=g12354.t1.exon1;Parent=g12354.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 37340 38647 . - 0 ID=cds.g12354.t1;Parent=g12354.t1 #PROT g12354.t1 g12354 MEEEATGVVDADSHFPQLSLSDSDSDDNNNSNGVGHGVLRGKRDKMRSTEDGGSASAINGVSFESPASGAGRSKNDKKTRRKDAKARARQNARAHDAHNAADAVRLPTVPLSTALIGGDGEANAQQLASPAVVEDTYVHGVYNAIADHFSHTRHSPWPIVRDFIECLSIGSAIADIGCGNGKYLGIASDRVYAHGSDRSDALVGLCTSRGYDALVCDNLSLPYRDASFDAAISIAVIHHLATRERRVRAVREMARIVRCGGRILIFVWAYEQNKHGMNDAQDVLIPWHLQKGYATAFSEAPSVQPPQSTTPSTTPLLPAIPPSQSAPIHDNSVVAAPSDDALKATVGVSIPPQSTDIREPDSTGHTIVTPAAAGFSAHSAHPIGGSKAAVYQRYYHLFRQGELESMVDDAACGLQIVSSGFDHENWYCIAEKVSR* # PASA_UPDATE: g12344.t1, single gene model update, valid-1, status:[pasa:asmbl_8407,status:12], valid-1 NODE_59_length_47791_cov_40.5281 . gene 152 2277 . + . ID=g12344;Name=g12344.t1 NODE_59_length_47791_cov_40.5281 . mRNA 152 2277 . + . ID=g12344.t1;Parent=g12344;Name=g12344.t1 NODE_59_length_47791_cov_40.5281 . exon 152 207 . + . ID=g12344.t1.exon1;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . CDS 152 207 . + 0 ID=cds.g12344.t1;Parent=g12344.t1;5_prime_partial=true NODE_59_length_47791_cov_40.5281 . exon 420 698 . + . ID=g12344.t1.exon2;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . CDS 420 698 . + 1 ID=cds.g12344.t1;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . exon 910 1033 . + . ID=g12344.t1.exon3;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . CDS 910 1033 . + 1 ID=cds.g12344.t1;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . exon 1419 1497 . + . ID=g12344.t1.exon4;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . CDS 1419 1497 . + 0 ID=cds.g12344.t1;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . exon 1653 2277 . + . ID=g12344.t1.exon5;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . CDS 1653 2017 . + 2 ID=cds.g12344.t1;Parent=g12344.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 2018 2277 . + . ID=g12344.t1.utr3p1;Parent=g12344.t1 #PROT g12344.t1 g12344 HAPADAMVCVNCMSWVHDSIKKSLAAKPHHGNPLSHSAVVPAPKPISLDINTVVERMIVRAKDHYHAHSSAVDLTVMQYKGFGKELLKQAKMHPDAVFQMALQLAYYRLYGKPAPTYETAQTRMFFHGRTETCRSCSIASTEWAKAMVDPSQSAQNRIRLFRAAIQSHLKYHGEASQGRGCDRHLFALYVLAKENGEEPHRLYTDRSYLASGGGGNFVISTSLIGYTPVWGGFTAMVKHGYGTCYNIRDHGINAIVTGWKDGGAKHNATEFKQSIEKSLDDIKALAEANVKADGQAKAKL* # PASA_UPDATE: g12348.t1, single gene model update, valid-1, status:[pasa:asmbl_8416,status:12], valid-1 NODE_59_length_47791_cov_40.5281 . gene 10520 16912 . - . ID=g12348;Name=g12348.t1 NODE_59_length_47791_cov_40.5281 . mRNA 10520 16912 . - . ID=g12348.t1;Parent=g12348;Name=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 14824 16912 . - . ID=g12348.t1.exon1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 14824 16912 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 13935 14395 . - . ID=g12348.t1.exon2;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 13935 14395 . - 2 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 13375 13530 . - . ID=g12348.t1.exon3;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 13375 13530 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 13157 13219 . - . ID=g12348.t1.exon4;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 13157 13219 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 12859 13020 . - . ID=g12348.t1.exon5;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 12859 13020 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 12582 12644 . - . ID=g12348.t1.exon6;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 12582 12644 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 12371 12412 . - . ID=g12348.t1.exon7;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 12371 12412 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 12078 12146 . - . ID=g12348.t1.exon8;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 12078 12146 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 11767 11903 . - . ID=g12348.t1.exon9;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 11767 11903 . - 0 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 11361 11399 . - . ID=g12348.t1.exon10;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 11361 11399 . - 1 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 11020 11105 . - . ID=g12348.t1.exon11;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 11020 11105 . - 1 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . exon 10520 10719 . - . ID=g12348.t1.exon12;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . CDS 10700 10719 . - 2 ID=cds.g12348.t1;Parent=g12348.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 10520 10699 . - . ID=g12348.t1.utr3p1;Parent=g12348.t1 #PROT g12348.t1 g12348 MDGSSRDGVGLTTHSAGTLSLSATAALAGDGKSPERHKGSIDDRKPLSLQDRLVSFSTARENFELQAQQQKEQAQQQNQHYARSPSIGTGQRPSTGLHKAYSMRERKSAPVVSRMVAKPFASPAVPSLSRSSTFTETPGSSPRAIVRRASDDGLTRQSTEEAHAFEFKTAIPPLSTEANPLSADGTSHVRAAITIDSSGKDVTEAVPSAGDTNASGSNNEIERLRRELAEARHEIASKDAAIASLTEKVSSAGADGETIRSLKEEIASLSARVEAEKADKNRLAGELSVVRVELEAGAKTIVSMETELIEVGEACTRGYAEVDVLRRDMLQKEAELENVLEEVKILRLEAAIIRRSNFDEVSAIRAAHAQEVNDLCSQIDFLRDHLEETEAELNEQMRANDELRALFEQENVDGDDGGDGEGDADGASEVGGGDASGNGEGSLEDVEERSVDTAGDEAEHLEARGDGRALDGDAVATAEIPDPSPLPSVSCPSDDSAGALAVEGEADAVSSSLAAAPAQPQETALDLSDIREEAEVEEEEDDAIAAAVAKSLAYDSDGAEESQLAVAAVSRVADARDLHTADASISAGVGESVPSENVDGVVVGAAKSTVADTAVHAPAARRTSVDAVVRSRAERSGSLAGSSASADSTEVRRGSVTSRHNHSLSDASRASGGSLKKPPLTTRVSSSNMRVIPFEIAIKDDVLASLSNVDMHPDRKRAVILAPWKRGVKASDIIGTRADADNTRAPAIMRGSAITVGGGGSAGNAGDSTTPSVAGAAQPSRAMSVPPPVVVTASAPDGETVVVTAPGDDAISPGEELLVRPVRSLSLHSLHLTSGGSDSGDESDGNRSQKPSRRPSASASAAVPPPMSPNHGQLLSARLIPDGVRIEVHKEGFLTKLGGKNKNWKRRWFVLDNEKLAYYKKQRHSEQNVDPAGVLDFTFGLCTVHSALATKKSNAFEVVTPLRTYTIFADTSEAASEWITAIQKAIEESRLIMGRKGRAIKGYLTKQGANYKTWRKRWFVLDEENGEVVYYRSNKEKERLGAISLRSSATSVPITPGHISFVPYFKYSRHNVLEVVTEARVFLLQAETPSDGRRWVHALKRCARRLDGSARAAESGRTSDSSDNDSEN* # ORIGINAL: g12352.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 27624 30016 . - . ID=g12352;Name=g12352.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 27624 30016 . - . ID=g12352.t1;Parent=g12352;Name=g12352.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 29987 30016 . - . ID=g12352.t1.exon1;Parent=g12352.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 29987 30016 . - 0 ID=cds.g12352.t1;Parent=g12352.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 27624 29864 . - . ID=g12352.t1.exon2;Parent=g12352.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 27624 29864 . - 0 ID=cds.g12352.t1;Parent=g12352.t1 #PROT g12352.t1 g12352 MERKAILAVLALLALSAASVSGEDCICPMLYDPVCADIAGINGAVTRMTFSNKCAAECKKALKVVPGECPAPEPACSRPCPLDHHCVAVTPEMCNKGDPSIQFRPRPHPTGMPFPPGPSDAPPMPFPSGGSGMPPPPLQKRDMDVPQPSSLPNHHRHHSSGMPQVPFECPKHFCQPDGCATFAPCSIEPCGQGEVSLVPEGGCCPVCSPAPKHGCDREESPCRANENCVRLEMSECKGKAPWDCFSCAPKNACANVECGLPPICQQGKLLKLSDECCPKCVDCYECEIPVCTREEILVNMPGQCCPICAPKRPSECIGVMCMVNSVPCPAGTLHRIPEGKCCAECVSIEGSDSVNNNDPSQFQDCSGGRAFTECGSACEPSCAFSPTVCVAMCVARCQCPGGLVRHKGLCIAKQQCPATTGDGADSVGKCSFNGATYKNGQSFRADCNTCTCRDGAVMCTKMMCPPKKKLCDANKKCPDNMVCTSEVMPCFVAPCPTQNVCVSPLDTPTATPTFFGELLALCKEGFTCAVVRAHVSGSVPAGTTASAMCNALTARLASLFNGVLDRMVDIDCAMSAEDALVINVRNVQPGGTFAKEVAAKLVRMLNRSEAKNRDAILGGISGASMSIPFGSETSGGDGGWINGIEDDDHDDDDSQHSGKHRSNNSNRNNSKMIAAIAVGSTVGAIVVASAVIFVVRYVRARNGSRAPKVAALIFGTNGYARVESDTAPPAYEGIKFESFSNDKDAKNQNNYEESQA* # PASA_UPDATE: g12349.t1, single gene model update, valid-1, status:[pasa:asmbl_8408,status:12],[pasa:asmbl_8409,status:12], valid-1 NODE_59_length_47791_cov_40.5281 . gene 17416 20312 . + . ID=g12349;Name=g12349.t1 NODE_59_length_47791_cov_40.5281 . mRNA 17416 20312 . + . ID=g12349.t1;Parent=g12349;Name=g12349.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 17416 17538 . + . ID=g12349.t1.utr5p1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 17416 17660 . + . ID=g12349.t1.exon1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 17539 17660 . + 0 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 17829 17917 . + . ID=g12349.t1.exon2;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 17829 17917 . + 1 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 18090 18169 . + . ID=g12349.t1.exon3;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 18090 18169 . + 2 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 18340 18653 . + . ID=g12349.t1.exon4;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 18340 18653 . + 0 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 18752 18818 . + . ID=g12349.t1.exon5;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 18752 18818 . + 1 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 19010 19084 . + . ID=g12349.t1.exon6;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 19010 19084 . + 0 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 19322 19335 . + . ID=g12349.t1.exon7;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 19322 19335 . + 0 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 19572 19766 . + . ID=g12349.t1.exon8;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . CDS 19572 19638 . + 1 ID=cds.g12349.t1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . exon 20086 20312 . + . ID=g12349.t1.exon9;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 19639 19766 . + . ID=g12349.t1.utr3p1;Parent=g12349.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 20086 20312 . + . ID=g12349.t1.utr3p2;Parent=g12349.t1 #PROT g12349.t1 g12349 MSFKLVGDHYDLQKLQRRGRQADLLCAEVPVDEAAVDSSGKIVCLVCPYKPVLDTAPALAVHRGGKQHRHYELIFQEKKAKHAELVQRREIEISLAAESGVVHRKSAPLAADTRKRTREALAMPVAAVSHVLSRTLGMQSPGREQQQQQQQQQQQQQQHQQQQQQHKQHKQQQHKQQQYQQQQQQQQQRDYPARRGMTTFADIPLDEIPLPPSPTHERTNEAKKIKRRKLEPHSTADAASIEHVTPHIRAGYIWIKGEWTRDPNAEFDSEEDASG* # PASA_UPDATE: g12347.t1, single gene model update, valid-1, status:[pasa:asmbl_8412,status:3], valid-1 NODE_59_length_47791_cov_40.5281 . gene 6044 9821 . + . ID=g12347;Name=g12347.t1 NODE_59_length_47791_cov_40.5281 . mRNA 6044 9821 . + . ID=g12347.t1;Parent=g12347;Name=g12347.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 6044 6406 . + . ID=g12347.t1.utr5p1;Parent=g12347.t1 NODE_59_length_47791_cov_40.5281 . exon 6044 9821 . + . ID=g12347.t1.exon1;Parent=g12347.t1 NODE_59_length_47791_cov_40.5281 . CDS 6407 9460 . + 0 ID=cds.g12347.t1;Parent=g12347.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 9461 9821 . + . ID=g12347.t1.utr3p1;Parent=g12347.t1 #PROT g12347.t1 g12347 MAEQQGTAAKPSGMLQKMQSLSTLGAGNSMKKRALSLGDSKAPQSRSRSGPSEAATNQVPLNDFKELVEVLDIGIEPSVLAEVSATGRILIKQGDVRSVIFSRNVSPSVLDTKAPLFGAMPVLDASVDLPQTPVELKKHTGIRLFFFNDILIVCKSPTVLSSSILGGSHKPRYPTLCEPIYCKAMLLQEPPASMKDHEKKICITFGDNTALFKFDSVASKNDWVDSVQGAIDWLASISNWSLLTPTRRAATVRLSRINLPKRVSVEDALESHEEGPQDGEDPLDYFARKAALEIEAQGNWSSADGRRPNWHADGKSTATASPTPVQAAANERARDSPRAAQSSLPVVILTHGAADDLVRSDAVSPPASVVGRDEGGIVVPAVTKTEVAIPEVTPRLSLSLPPQLKKANSDSSLTSPSFKRAFVYDTPQRVESAAPNDATSTTDVASGITNAGVSASVTGAPHADGGAAASAAPASSGSTSLTPAAAERSMSIAGGTLRGATMSMMRSQSNIDKGGLATATASTISAGTAAAALADAGSGAVQVMYLSEGGVDKMILRVQVNDDDKSKGPLLQSHDPKAPKGNQQRPNDPKASKGQQQQSSEPKAPKIEVIAGTPEKLAERLADESQRDINYVWAFLLSYRTFMTPVALFKMMSTRFNMTMVNNANENDKTYFEKWRRPIMTLVINTVVHWITWHYQDFADNPDLDAMLSTFLANVSEQNFRIAREMLDELRAMHRAKSVAVKDLLVGPPPKSFKKRLDSIVPKTKAPELAEQITLFDAEIFAKVTPIEYMNTIWPPKGKEKEEHSPMLMQFIQRFDTESYWVATEVCSFGDPQMQSLMIRKFIKVAVRCLELNNFYSMFAVMGGLSFPPIRRMKAAWEMLSEKTLRAKERVEKIMNPSRNMRSYRDAIAAVPKGTAAIPFLPVYMKDLVFINDGNPKLIEGMINFEKLTMLANVVQRLVEFRSSPYPIVRVTHVMSYLEGTKIIRDVDKLTSDVNALTEKWKADASQGKGSVRRMME* # PASA_UPDATE: g12351.t1, single gene model update, valid-1, status:[pasa:asmbl_8413,status:12], valid-1 NODE_59_length_47791_cov_40.5281 . gene 25276 27252 . - . ID=g12351;Name=g12351.t1 NODE_59_length_47791_cov_40.5281 . mRNA 25276 27252 . - . ID=g12351.t1;Parent=g12351;Name=g12351.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 27099 27252 . - . ID=g12351.t1.utr5p1;Parent=g12351.t1 NODE_59_length_47791_cov_40.5281 . exon 25276 27252 . - . ID=g12351.t1.exon1;Parent=g12351.t1 NODE_59_length_47791_cov_40.5281 . CDS 25281 27098 . - 0 ID=cds.g12351.t1;Parent=g12351.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 25276 25280 . - . ID=g12351.t1.utr3p1;Parent=g12351.t1 #PROT g12351.t1 g12351 MTKGKGSAAASRSVAQGPSFSPKITSLEEFVDRFTLSQPKLPEYLSRLSYTELRGAIEAIEKGNRNKYVVRYLLRGCEFTYFQYMSYEIPTRELCSCVLEVLRQLVLRRNAAPADSPSARPLGPVEELGAGFALLSAVLNCRLNEMPKLRDAIGGNIVPSEPFEEHDTSWYSARRGRFPERGVFGHVAPQNFQEYSSKQSGGSVAIISWPHPSSEQELKKVFACERTRHVIVIGEPVGFSCLTKEFAVSTIVSLGYRVTRIPALTICQVDFFYEDIVRRGIDPYMCRSEVILFSRDVSWSESEVKTIFGKWLGTPRTLLVGEGEAYKAYEMRFVVAEQQQAQLQAQLQAQLAHVTSPPPTQTHVATQPIITPPSSTNTPTAAAQKQQQSSSTTSPARSDGSTVIRNTPPAPLPLGGVNSSPNGDGKHPPSPTSAVGHRPAIEVDSESSGTTAAAMARTIVKDANSSDAQSHAVPVEPKPPKHTNVHHPGHVPAAHLPPPHPHTNERAHAPQSSPNASPARTGSTDPAAHIMSPSRPPGANADVHPPVHVDWGDGAGDASASPARGTHANGHHGAPHGGAGRGVKRPPGMPVLQSHPSWKEQFPFL* # ORIGINAL: g12350.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 20925 24397 . - . ID=g12350;Name=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 20925 24397 . - . ID=g12350.t1;Parent=g12350;Name=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 24364 24397 . - . ID=g12350.t1.exon1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 24364 24397 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 24087 24186 . - . ID=g12350.t1.exon2;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 24087 24186 . - 2 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 23852 23971 . - . ID=g12350.t1.exon3;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 23852 23971 . - 1 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 23577 23724 . - . ID=g12350.t1.exon4;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 23577 23724 . - 1 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 23242 23340 . - . ID=g12350.t1.exon5;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 23242 23340 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 22847 22924 . - . ID=g12350.t1.exon6;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 22847 22924 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 22318 22572 . - . ID=g12350.t1.exon7;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 22318 22572 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 22106 22129 . - . ID=g12350.t1.exon8;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 22106 22129 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 21722 21772 . - . ID=g12350.t1.exon9;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 21722 21772 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 21304 21420 . - . ID=g12350.t1.exon10;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 21304 21420 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 20925 21086 . - . ID=g12350.t1.exon11;Parent=g12350.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 20925 21086 . - 0 ID=cds.g12350.t1;Parent=g12350.t1 #PROT g12350.t1 g12350 MADRDIDELLLGLERSMNKGNAAKAAAQTKEPDTPKVVDMKTPFKWYHGKLGRGETEELLNNKPLGAFLVRDSTSSPGDYVLSVVEGKVSHYIINDMKGMYKIGDIKCQDVPSIIEHYKKNRLDKTTLTLSVDYGVLAALKAQFDFNSGDREDLPFKKGDTLYLIEKYDDAWWRAQDENGRTGMVPANYVKIVPVMAPTPTLPPSPARPVPRSHSQSFGSGSGSSPSSPRLERSASVVPGMASAPSPAAVAALRALADGGGGGGGALLRSHSIVSFPKVEIPDAAKRPMLPLPSDAPPEFPPMSPLSSSYPIMPDGSAILARVRVSSNIAPSSDQKDGLACSVGDTIFVLRQDAGGLWYGQNDTTGIRGYFPSIAVEVLPMPQRRATHHIAPEGF* # ORIGINAL: g12356.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 44878 47723 . + . ID=g12356;Name=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 44878 47723 . + . ID=g12356.t1;Parent=g12356;Name=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 44878 44903 . + . ID=g12356.t1.exon1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 44878 44903 . + 0 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 45194 45294 . + . ID=g12356.t1.exon2;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 45194 45294 . + 1 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 45641 45768 . + . ID=g12356.t1.exon3;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 45641 45768 . + 2 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 46027 46148 . + . ID=g12356.t1.exon4;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 46027 46148 . + 0 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 46425 46678 . + . ID=g12356.t1.exon5;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 46425 46678 . + 1 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 46920 47149 . + . ID=g12356.t1.exon6;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 46920 47149 . + 2 ID=cds.g12356.t1;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 47568 47723 . + . ID=g12356.t1.exon7;Parent=g12356.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 47568 47723 . + 0 ID=cds.g12356.t1;Parent=g12356.t1 #PROT g12356.t1 g12356 MTDNQKEQGQPQLLKQDLASLKVEALNPLTPEVISRQATINIGTIGHVAHGKSTVVKALSGVQTVRFKNELERNITIKLGYANAKIFKCDNPGCPRPACYRSYGSSKEDKFPCDRVGCTGKMSLERHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIIILQNKIDLVKQSQAEEQYQEIISFVKGTVAENAPVVPISAQLKHNIECVCEYIVKKIPIPVRDFTSTPRLIVIRSFDVNKPGCEVDNLRGGVAGGSILRGVLTLGQEVEVRPGIVSKDAEGKLKCTPIRSRVVSLYTEQNDLQFAVPGGLIGGC* # ORIGINAL: g12345.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 2574 3224 . - . ID=g12345;Name=g12345.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 2574 3224 . - . ID=g12345.t1;Parent=g12345;Name=g12345.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 2574 3224 . - . ID=g12345.t1.exon1;Parent=g12345.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 2574 3224 . - 0 ID=cds.g12345.t1;Parent=g12345.t1 #PROT g12345.t1 g12345 MAAVESASSSVDGDVVLVTGFGPFGNHKINASWEAVRVLDGKIIDGVRVVTRHLDVAYDTVLSTVPKLWDELKPIAVIHCGVGHDGEIHVEKLARRADYSIADVSGCTPASKRCDFPDEAFRQRQKDSYECRINCHEIADAVRGKELKCEVSCDAGKYLCEFTYYVSMCFGDAPSVFVHVPSIGKPYPIEALSAGVEAAVESVVKQSRAASKQHAA* # ORIGINAL: g12346.t1 original gene structure, not modified by PASA NODE_59_length_47791_cov_40.5281 AUGUSTUS gene 3631 4685 . - . ID=g12346;Name=g12346.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS mRNA 3631 4685 . - . ID=g12346.t1;Parent=g12346;Name=g12346.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 4021 4685 . - . ID=g12346.t1.exon1;Parent=g12346.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 4021 4685 . - 0 ID=cds.g12346.t1;Parent=g12346.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS exon 3631 3859 . - . ID=g12346.t1.exon2;Parent=g12346.t1 NODE_59_length_47791_cov_40.5281 AUGUSTUS CDS 3631 3859 . - 1 ID=cds.g12346.t1;Parent=g12346.t1 #PROT g12346.t1 g12346 MLGPDDDPSRDARGVSDDANVATQEHPHVPAQKGAIDAPALPAAELFSKTVQIEFKRIYLDLKENQRGRYLKIAELDAVGNKSTLTLPISCIPSFRDVLDTMAKLEEGISSLPPVAEADMSSRMPPIRSESMQAESKRIYFDLRANQRGRFLRISQASTYRAREAIVVPSTGIPMLRDAIDEVVNKAGESVGDAAVLGSTVGSREFRADGKRIFTDVGTNPRGTFLRISEMSGTHRASVTVPLDGWAELRSIIDDSIAAVAATAHDVSPDGRRDDASEKVKKTENSALHAVEGSAEE* # PASA_UPDATE: g12355.t1, single gene model update, valid-1, status:[pasa:asmbl_8417,status:3], valid-1 NODE_59_length_47791_cov_40.5281 . gene 38979 44061 . - . ID=g12355;Name=g12355.t1 NODE_59_length_47791_cov_40.5281 . mRNA 38979 44061 . - . ID=g12355.t1;Parent=g12355;Name=g12355.t1 NODE_59_length_47791_cov_40.5281 . five_prime_UTR 43623 44061 . - . ID=g12355.t1.utr5p1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 43428 44061 . - . ID=g12355.t1.exon1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 43428 43622 . - 0 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 42987 43179 . - . ID=g12355.t1.exon2;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 42987 43179 . - 0 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 42497 42698 . - . ID=g12355.t1.exon3;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 42497 42698 . - 2 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 41297 42192 . - . ID=g12355.t1.exon4;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 41297 42192 . - 1 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 40952 41094 . - . ID=g12355.t1.exon5;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 40952 41094 . - 2 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 40650 40785 . - . ID=g12355.t1.exon6;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 40650 40785 . - 0 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 40002 40412 . - . ID=g12355.t1.exon7;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 40002 40412 . - 2 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . exon 38979 39725 . - . ID=g12355.t1.exon8;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . CDS 39103 39725 . - 2 ID=cds.g12355.t1;Parent=g12355.t1 NODE_59_length_47791_cov_40.5281 . three_prime_UTR 38979 39102 . - . ID=g12355.t1.utr3p1;Parent=g12355.t1 #PROT g12355.t1 g12355 MAFGLFRVPAAFVRRHADALLAVCGLNTARRQILLILLLVSVFVTAKMFFSHVIAHGEVVDSDGKTGAPAASPERLRKCLSRSVRVWQDAAGDMSNFITHFHSAGDEELPLPYYGNGFVGASLGARFFQVAGVYAHKGAHSHLARIPNVLGTSVTVNGGMGEYLSTATVLDIRRGLVNRVTCFIDGTADDVAVEETWYAHRTIDGLMAHTLRVINNRQASVSVEIAVPPPRSEDIIATLASRAADSAGAGAAPGGDTPVVDSVDVLYGTVADGEVVGAGIASVAVAWNVIPPSIIVAGRRTETIRRLVAVVADIPRPPSAAEPLNANGGGDSSAGGAVVPDTLAEQAVFLCRKHFRRMVDGALLGEHESGWADLWSRGGVRFPDHVTLNGMSLDRLVNSTMYYIMSSLSPSRADSISPGGIAGGRQCYNEHVFWDAETWMLPAVQLFHPLLAEKMLDYRFDRLYMAEAKAATMGFKGAMFPWQSGATGAEVCPEKTHSDGEIHVVGDIAFAVRQQYYLSLDSEWLRRRGWPIVRGAAQFYASRVTEVPVPGDLPVYAINDVVPPDEYAAHVDNSVYTNAIAKITLEFAAQVQSIVNAVDDAQDASRWKAIAERLVIPYDGVTMVHPEYSGYSGHKVKQADAILLGFPLSYPMPPEVRAHDLEYYLERTDRKGPAMSASMFAVGYLALREKWEADYQLTRSFEVVDGRFNVWHEMPLAMGCEHFLTGAGGFLQALVYGYGGVRVFADHIRVHPTLPSSSHGIDLLGMRYASYVFDVSATDTKITVTLREQESLGVATARPSTLYVCEGACQSGVTPIGMGDSLSFERGMIHISVNASVLSTLRLPDLTYGAKFNEPQLPLVAVKEVKAPDNVGGTLSALFRDHQVAMVLIIVLVVGVHAVLITVVYMEYCAGGASEHRRKRKISDMEHSSRYE* # ORIGINAL: g8974.t1 original gene structure, not modified by PASA NODE_3691_length_2945_cov_34.6882 AUGUSTUS gene 479 2851 . + . ID=g8974;Name=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS mRNA 479 2851 . + . ID=g8974.t1;Parent=g8974;Name=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS exon 479 1156 . + . ID=g8974.t1.exon1;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS CDS 479 1156 . + 0 ID=cds.g8974.t1;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS exon 1531 1918 . + . ID=g8974.t1.exon2;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS CDS 1531 1918 . + 0 ID=cds.g8974.t1;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS exon 2281 2412 . + . ID=g8974.t1.exon3;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS CDS 2281 2412 . + 2 ID=cds.g8974.t1;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS exon 2550 2677 . + . ID=g8974.t1.exon4;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS CDS 2550 2677 . + 2 ID=cds.g8974.t1;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS exon 2810 2851 . + . ID=g8974.t1.exon5;Parent=g8974.t1 NODE_3691_length_2945_cov_34.6882 AUGUSTUS CDS 2810 2851 . + 0 ID=cds.g8974.t1;Parent=g8974.t1 #PROT g8974.t1 g8974 MYDLRGMVNEDKDLMRILASFSITSTEDDSDDSVRHGKSQQQAEIEKSDLLKVLESIEGIDAKSFAEVPDRRLVFEGDVIEVDPGTYKFMHDIHMLVFTDVLVTTTRLTRRRSVVQLVGGGGAERVGAATRYKVTRQTPMVNIAAIDVKDTEDLQFAFKLLASPDTHLYRTNTLSQKAQWIEVFKRIEEDRKERGRSVAEKERRVREEKSREAYRQAETERLNDEKRRAQALVVDWVLDLPDDLDVSIAQRDFKAASELILKGRACLADSRASSASASASASSTANSNEHPVEREIRIAIEQRAQSLASALTADLCNANLRFSSVRGHVSILVALGQEDLARELFLANRSRALRKAMRAVRMEGATNIYIKELSRTFFRTSKDVMADFVTSFEDSGNKAAFVAWLLKELERYASIFCHQVFQADTFGIVAECMEVAVAACATICKFLIGACHLLR* # PASA_UPDATE: g12329.t1, single gene model update, valid-1, status:[pasa:asmbl_5904,status:12], valid-1 NODE_3338_length_3695_cov_39.3191 . gene 219 2065 . - . ID=g12329;Name=g12329.t1 NODE_3338_length_3695_cov_39.3191 . mRNA 219 2065 . - . ID=g12329.t1;Parent=g12329;Name=g12329.t1 NODE_3338_length_3695_cov_39.3191 . five_prime_UTR 1824 2065 . - . ID=g12329.t1.utr5p1;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . exon 1708 2065 . - . ID=g12329.t1.exon1;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . CDS 1708 1823 . - 0 ID=cds.g12329.t1;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . exon 1021 1327 . - . ID=g12329.t1.exon2;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . CDS 1021 1327 . - 1 ID=cds.g12329.t1;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . exon 463 612 . - . ID=g12329.t1.exon3;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . CDS 463 612 . - 0 ID=cds.g12329.t1;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . exon 219 285 . - . ID=g12329.t1.exon4;Parent=g12329.t1 NODE_3338_length_3695_cov_39.3191 . CDS 219 285 . - 0 ID=cds.g12329.t1;Parent=g12329.t1;3_prime_partial=true #PROT g12329.t1 g12329 MDGTASADVSEPTHNAADGDEISHIRHESLSPPLSPAPRDGHLNDSIGAITDNGATGNGDGGADASDLQASRKSTTSAVATGEREREKERDRDRDSRDRRDYRRERSDDGSVNPGNNLYVTSLSTRTTEEELKAEFAKFGEIVDLQIVCDPHSRVSRGFAFVTMREVGAAEKAIESLKGMMLNGRAMMIEKARRGRPRTPTPGRYIGEDTSDR # ORIGINAL: g6021.t1 original gene structure, not modified by PASA NODE_1188_length_13273_cov_43.8932 AUGUSTUS gene 116 3715 . + . ID=g6021;Name=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS mRNA 116 3715 . + . ID=g6021.t1;Parent=g6021;Name=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 116 280 . + . ID=g6021.t1.exon1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 116 280 . + 1 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 446 545 . + . ID=g6021.t1.exon2;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 446 545 . + 1 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 860 973 . + . ID=g6021.t1.exon3;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 860 973 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 1286 1374 . + . ID=g6021.t1.exon4;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 1286 1374 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 1750 1909 . + . ID=g6021.t1.exon5;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 1750 1909 . + 1 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 2078 2206 . + . ID=g6021.t1.exon6;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 2078 2206 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 2411 2473 . + . ID=g6021.t1.exon7;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 2411 2473 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 2925 3125 . + . ID=g6021.t1.exon8;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 2925 3125 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 3320 3403 . + . ID=g6021.t1.exon9;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 3320 3403 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 3656 3715 . + . ID=g6021.t1.exon10;Parent=g6021.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 3656 3715 . + 0 ID=cds.g6021.t1;Parent=g6021.t1 #PROT g6021.t1 g6021 CTFQALNLDKKDWFGKSDPFLEISRVLENGTFQVVHRTEYVAKTLNVTWKTFETSLQKLCNGDRERPLKFTVFDWNSSGKHELIGEFKTSVGEIQGGRTSFDVVDPSKLQKKGYVKSGTFHVVDFNVYRVDSFIDFIRGGLEISLIAAIDFTASNGDPRVPGTLHFMDPYHPNEYAEAILSVGEVLSSYDSDNSYPVYGFGAKVPPTNQVLHCFPCNGLWDNPCVSGLSGILDAYKLAISTVTLFGPTLFAPLLAQVKSIVAPSAAENRSQYFILLIITDGEINDMPQTIDLIVELSALPISIVIVGVGAADFTNMETLDADDRPLVSTRGVHMQRDIVQFVPLRRVKQSHGGQINIAKETLAEIPSQLLAYMKARGIHPNVPAPAV* # ORIGINAL: g6022.t1 original gene structure, not modified by PASA NODE_1188_length_13273_cov_43.8932 AUGUSTUS gene 4681 6947 . - . ID=g6022;Name=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS mRNA 4681 6947 . - . ID=g6022.t1;Parent=g6022;Name=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 6881 6947 . - . ID=g6022.t1.exon1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 6881 6947 . - 0 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 6510 6582 . - . ID=g6022.t1.exon2;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 6510 6582 . - 2 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 6286 6386 . - . ID=g6022.t1.exon3;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 6286 6386 . - 1 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 5811 5876 . - . ID=g6022.t1.exon4;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 5811 5876 . - 2 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 5312 5367 . - . ID=g6022.t1.exon5;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 5312 5367 . - 2 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 4973 5085 . - . ID=g6022.t1.exon6;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 4973 5085 . - 0 ID=cds.g6022.t1;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 4681 4840 . - . ID=g6022.t1.exon7;Parent=g6022.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 4681 4840 . - 1 ID=cds.g6022.t1;Parent=g6022.t1 #PROT g6022.t1 g6022 MDPPMKTNSYDFLIKLLLIGDSGVGKSCLLLRFAEDSFTPSFITTIGIDFKVRTVDLDGKLIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNVTAWVKNIQQNATDAVDQVVTTEAGQELADKLAVAFFETSARTGENVDTAFLSLAREIKKKTLDVAPPAAEEGSHSDGKRERRMSTAFGLAETSADASSSSDNSLCSC* # ORIGINAL: g6023.t1 original gene structure, not modified by PASA NODE_1188_length_13273_cov_43.8932 AUGUSTUS gene 7596 9152 . - . ID=g6023;Name=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS mRNA 7596 9152 . - . ID=g6023.t1;Parent=g6023;Name=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 8535 9152 . - . ID=g6023.t1.exon1;Parent=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 8535 9152 . - 0 ID=cds.g6023.t1;Parent=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 8150 8400 . - . ID=g6023.t1.exon2;Parent=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 8150 8400 . - 0 ID=cds.g6023.t1;Parent=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS exon 7596 7938 . - . ID=g6023.t1.exon3;Parent=g6023.t1 NODE_1188_length_13273_cov_43.8932 AUGUSTUS CDS 7596 7938 . - 1 ID=cds.g6023.t1;Parent=g6023.t1 #PROT g6023.t1 g6023 MASTIFAPRGFGLFVDEHNRIANDGIQIRVHAPLSESAEAACVDQALSTADRPQVGAPHPMHSRCKRHTVTMMHRRQQRKKSVAWRRHQHELSPSYDDIRPGGLWPEGDGGMGHSTARIHTAPNRPPSALLVPTSFQSDDEDDNRTVTAYDNAFATDDDGFSFAEVDEPRSQRRVSSRMRHFDDEDKSITCTTPRNDFSEIETDIQPAPIEASQSQEQEEDDLFEDGDYCDSTDGGVADKGKRKRADASTNIANKRRATSSARKNINVTADCEKEANPKPARKPYVKKAKKPAEGRIHVFHNVNWQPTTNAATTTADGQVDVAPAHSLHRLDAARSRRPPVAGMDWRNGHHVGHLKKDCPMCRGMPMGYATTTVASRQQLLHHHWYCRQRIRWVSDARGNEAQ* # PASA_UPDATE: g6024.t1, single gene model update, valid-1, status:[pasa:asmbl_694,status:12], valid-1 NODE_1188_length_13273_cov_43.8932 . gene 9952 13163 . - . ID=g6024;Name=g6024.t1 NODE_1188_length_13273_cov_43.8932 . mRNA 9952 13163 . - . ID=g6024.t1;Parent=g6024;Name=g6024.t1 NODE_1188_length_13273_cov_43.8932 . five_prime_UTR 13080 13163 . - . ID=g6024.t1.utr5p1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 13063 13163 . - . ID=g6024.t1.exon1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 13063 13079 . - 0 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 12720 12816 . - . ID=g6024.t1.exon2;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 12720 12816 . - 1 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 12384 12555 . - . ID=g6024.t1.exon3;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 12384 12555 . - 0 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 12085 12145 . - . ID=g6024.t1.exon4;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 12085 12145 . - 2 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 11791 11913 . - . ID=g6024.t1.exon5;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 11791 11913 . - 1 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 11473 11601 . - . ID=g6024.t1.exon6;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 11473 11601 . - 1 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 11103 11191 . - . ID=g6024.t1.exon7;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 11103 11191 . - 1 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 10701 10920 . - . ID=g6024.t1.exon8;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 10701 10920 . - 2 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 10499 10583 . - . ID=g6024.t1.exon9;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 10499 10583 . - 1 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . exon 9952 10365 . - . ID=g6024.t1.exon10;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . CDS 10165 10365 . - 0 ID=cds.g6024.t1;Parent=g6024.t1 NODE_1188_length_13273_cov_43.8932 . three_prime_UTR 9952 10164 . - . ID=g6024.t1.utr3p1;Parent=g6024.t1 #PROT g6024.t1 g6024 MTSNARKELVILYKEGDPAPNNTMAWAEARAWTNGHHHVRMHRQRNFDVNHFKSDFGRLARRIRGKLIGLVLGGGGAKGLAHVGVLKVLEENGIPIDMVGGTSIGAFIGGLYATHRDADIVADLVEDYCVAFADRVAILRDVTVPFTSFTSGEQFNRLIRRFFLETKIEDMWLPYFCTTTNITKNKPEFHQQGTAWRFIRASMTLISFLPPICDGPNLLVDGGYANVLPADIMRAQGARTIIAVHVATEDDTNYTNYGDSLSGWWLLLKRINPFAKPVNVPSMSDISTRMCYLKSDLNLDFVKENMIDLYMRPPVNNYPLLGFALFDEISKVGYGYAKTTVETWKEENRIPELLLYSRKRRRGSLLSLLSVGGGQASLSATLASIPAKTPGPGKAAA* # PASA_UPDATE: g6428.t1, single gene model update, valid-1, status:[pasa:asmbl_5730,status:12], valid-1 NODE_3212_length_4006_cov_39.0071 . gene 62 3501 . + . ID=g6428;Name=g6428.t1 NODE_3212_length_4006_cov_39.0071 . mRNA 62 3501 . + . ID=g6428.t1;Parent=g6428;Name=g6428.t1 NODE_3212_length_4006_cov_39.0071 . exon 62 1702 . + . ID=g6428.t1.exon1;Parent=g6428.t1 NODE_3212_length_4006_cov_39.0071 . CDS 62 1702 . + 0 ID=cds.g6428.t1;Parent=g6428.t1;5_prime_partial=true NODE_3212_length_4006_cov_39.0071 . exon 1969 3501 . + . ID=g6428.t1.exon2;Parent=g6428.t1 NODE_3212_length_4006_cov_39.0071 . CDS 1969 3501 . + 0 ID=cds.g6428.t1;Parent=g6428.t1 #PROT g6428.t1 g6428 LCLIETANLDGETNLKQRRALNETSKPADGAEFTPSSFTGSITCELPNPRIYEFNGVLNTQGHQAAVDSTNLVLRGCVVRNTREAIGIVVYAGHETKAMLNNSGPRSKRSKLERMMNTEILACVGLLLAMCFVCAFAYAAWMNNINYEINIYYWFVPGDDSRPALAGFLNFWTMIIVLQVIIPISLYVTMEIVKLGQVYFIANDVELYDPESNKPINCRALNITEDLGQIEYIFSDKTGTLTENKMIFRKCTIHGINYAHTGRLPHSASTTSLQAGAHTASEQRESMVFAGGHVGVASPFLLDPVLVQAITDPSSNPAVAEAAESFFLALALCNNAMPARKKDEISGVTPANRPMYESESPDEVALVTAARIYGYALEGRSQNTVTVNARGKAVTYELLNVFEFDSDRKRMSVIVRLPDGRLRLFLKGADSIVLARLRHPPATAHSSHTGKEPAVPTSRMSNSLGNNDDGREETQKHLDYYASDGLRTLCIAYKDIDEKAYEAWLGSFRQASVAIENRSQKVSAVAEVMERDLILLGATGIEDKLQQGVPESIATLRNAGIKVWVLTGDKQETAINIAFSCQLFANDMHHIILNALDFDECDKLISDALNRMDRRASFAPVEGQKRTSSTSSESKEYALIIDGATLAFALRPELREKLLALSSKCKSVVCCRATPSQKAEVVRLVKEGKKAMTLAIGDGANDVSMIQMADIGIGISGQEGMQAVMASDFAVSQFRFLVRLLLVHGHWSYQRLATMVLYFFYKNSTFVFLLFWYEFYCGWSGATAIDQFYLFLYNLIWTSLPPIITAVFDQDVTAERLMANPDLYQLGLNSMIYTRRRFWLTIVDSLYQSIVIFFFVLGSYYQGDYADVQTLGLVWNTALVVTVNLQMGMETQHWTWVSHFVIWGSIIVYWLFAIVYNSISSIGGSYWVMETAMGTGVFWLTLWVTIIAALLPRYIAKFIKHWHYGSPIDAARLEHKFQLSKDAESGAASAAASGSNSNNDANGRPASASSATQDDDCDQSFAMRILRRFSRRTSSAPNMDRRDTTISPTAPVLANAV* # ORIGINAL: g14413.t1 original gene structure, not modified by PASA NODE_289_length_27904_cov_42.4022 AUGUSTUS gene 11812 15052 . - . ID=g14413;Name=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS mRNA 11812 15052 . - . ID=g14413.t1;Parent=g14413;Name=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 14596 15052 . - . ID=g14413.t1.exon1;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 14596 15052 . - 0 ID=cds.g14413.t1;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 14203 14441 . - . ID=g14413.t1.exon2;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 14203 14441 . - 2 ID=cds.g14413.t1;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 13588 13995 . - . ID=g14413.t1.exon3;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 13588 13995 . - 0 ID=cds.g14413.t1;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 12196 13435 . - . ID=g14413.t1.exon4;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 12196 13435 . - 0 ID=cds.g14413.t1;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 11812 12053 . - . ID=g14413.t1.exon5;Parent=g14413.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 11812 12053 . - 2 ID=cds.g14413.t1;Parent=g14413.t1 #PROT g14413.t1 g14413 MSHQYVPGDGQDLDATGGSCTGFSHGNGVGMMLNGGIVDQTGASGCIFVGDVNVVCFPWAYGSLHVSASQFAATLLGIAFIVIAVAVVRMWRRRHVPVLHITTIRDCAFITLDASGVIVTFNKGAEDVYDVVAADRIGKPFRCLYTEDDRHAGVPEEDMATARRLGRTEREVLTRRAASGKIPGYAHVVLTSHDCGKGGYTVVARDITIHKHAEEELRESEGRFRLLVSSVKDYAIFMLDVSGTVASWNAGAERIKGYTADEIIGQHFSKFYLQSDVDDGKPEMELREARKGGRYEDYGWRVRKDGSQFWANVIITAMFDTNGELCGFAKVTRDITERKRLEAAIIEKEAAESANEAKSQFLATMSHEIRTPLYGIMGSTELLKCTPLTEEQGEFVGTIEKCGDGLLVLINDVLELSRISAQQLVIENVAMDITSVCMDVAAILGPQAATKRIKIRVDAVKKVPCMVNDPARVRQVIVNLLGNAIKFTPGDGHISIAVEETADAKAVRCSISDDGIGIAAENQPKLFHMFTQVDSSTTRAFGGSGLGLAISKRLVEMMGGRIGLESTLGKGSTFWFELPLPSERFFFPPDFYLPPSPGTMVGKLRQLPATAMSRDSFGQSGSWSGTPLSQASSRTDVSEALNTLAPQHAETDSNNNYSTVLGDDGTNPLERVAEMPAMIAGTPDQSRDGDLGSSAVAFCDSNLRSAADGASPSTGRLRVLLVECEKTVCSMASANQLERHGCVVSTARTGTDAVRLALDSADKGLPYDIIILDTSLPGPAMSVWSASAEIRARLPVTCTTRPTIIAVIDGAPTEALLHRCHAAGMNDCISKPLSMTVLRSVLAKPGRSPALSVARRPVTSR* # ORIGINAL: g14411.t1 original gene structure, not modified by PASA NODE_289_length_27904_cov_42.4022 AUGUSTUS gene 1428 7410 . - . ID=g14411;Name=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS mRNA 1428 7410 . - . ID=g14411.t1;Parent=g14411;Name=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 3197 7410 . - . ID=g14411.t1.exon1;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 3197 7410 . - 0 ID=cds.g14411.t1;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 2894 2927 . - . ID=g14411.t1.exon2;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 2894 2927 . - 1 ID=cds.g14411.t1;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 2434 2575 . - . ID=g14411.t1.exon3;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 2434 2575 . - 0 ID=cds.g14411.t1;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 1428 2089 . - . ID=g14411.t1.exon4;Parent=g14411.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 1428 2089 . - 2 ID=cds.g14411.t1;Parent=g14411.t1 #PROT g14411.t1 g14411 MFFLSFSSITSAANMSDSLVSLIASAIATGASEVVLSSPGAGASNDNDGIHLKIGGTAPLDDASRMALSIGLFVNGSILVDGGGAVVNVGCLVGPIILASGSLVIVNLTFSGQCGDLSLSPIFHISENADVAAHDVMFVGVTSPLFLVDGGTMIMSRVHVTNVHTDGQSLIHLRGSAAAFLSNATFAAVSASGPGAVFRAEGMSSLTLLDSEFVNISATASSGAAYFGSGACVLTVSRTVITGADTPKSGAVFAITESCVAHISDSTIQSVRALKQGGVMLVADMAAVSLHRVLLNTTSAGAAGGAIAMWDSASVSATNCTFLNLLAQADSPGGVISATESSILALSGCSVDGAAAGTGGVVAAFDSASVSINGGVFSRLSASRSGAFATVYSDAKIVLDGAVIFGVSAGISGAVFRVWDAGIVIMTTCRIRDASCLEDGAVVLVQDSGYVAMTDSVVLMSVAIGNGGVGVALGSSVIESSGCVYQGASSGNAGGAFYAYDDALIQSDGDYFADLSAVSGGVGLFYKTSRGIFRDSVIRFVSVDVFGGLAAVTDDARVDFVNGSVRDVLTNNGGGVYVDERGVLKLQWMSLDFMRVGSSNSAALGAALTRGSLLVVDCVVTDMLADDAGSLYADGYGDILVVRTFVSNSRSGLFGAGGFAILQLNSRMHVRDSVIVDGWADYHGGVLSLAGNASATIEGSEIIRPQSGGVGGVASIYDTAALLMRNCQIVNAASNLDGGAVALYYQGFAHFENVTFGSSLARHMGGVVSVSGSASIHMVGCSILTSSAEDFGGAFACAGASADMASSVTVIDTLVRSSFSRRGGGVLYATSCKVALLRVRVFDTAAVPGIESDAFVAGDSFGFGGVFLLQQGSSLMSHDCRVGSSESVSGGGGLVAVLSNSSCSFFNLTGTGGGSAAVMGGVAFVSRGSRLDLVSSTLVGGSAQGNGGCFYVSRGSFITMREVVISACIAGADRASYGSGGLLYAEENALVTGESFASVHVGRAMATRGSVVFTYQFLVGLFNNASRLSVGSTRAVVDMSAALLQPWLPVEWSPGGYITSSPAAFAIPVTCVGVPGGEVEAFSVEIRDAYGYAVSIPPAESPSLRLVGGMPAPSGSHANSVPPSAVLRGQIERVFGSSASVSVVGFRAFGHPGTYVVSLQPANLMYDASRPPFSNASMILKLLDCPSEAVLSTTADGLDACVAVTSQASSFGTDLAVGLSLGIGLPVILGALLFVAYRRGLLTPANVDRQGREAFLAEYVAKRPSLAAVEVPRDAIHLLNELGRGEFGVVYRANIVCNGRPRQCAAKLIRESSNFQARVDFFREAEVMLGLLLHENVVQCAGVSLAQEPMLMLMEYVAAGTLGAFVAAIPWAHRSGPHIREMFATFARGIAAGMAHLAYNRIVHRDLAARNVLVGTDVFGEYVVKISDFGLARTATGGGDGLYQKSKGGRLPVKWLCPESMRTGVFTSKSDVWAYGVVLWELYSFGSAPYPSVPNAQIRAYLDSGHRLERPQMCPVEIYGVMLLLWASRPEQRPTFKAIMDALDGAVPNASTEVRDNVLGEESLTPRYDNVVNATRCRFGSDPQTESAGEGMTAVFGRTLEMHDMRLPGGSVVTAASNPLANSYLALSAIGEPSTGQQYDNDGSECAARNSGKPLFNMSVVALLRDGDGDSTATPVCIDDSLV* # ORIGINAL: g14412.t1 original gene structure, not modified by PASA NODE_289_length_27904_cov_42.4022 AUGUSTUS gene 10898 11263 . + . ID=g14412;Name=g14412.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS mRNA 10898 11263 . + . ID=g14412.t1;Parent=g14412;Name=g14412.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 10898 11263 . + . ID=g14412.t1.exon1;Parent=g14412.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 10898 11263 . + 0 ID=cds.g14412.t1;Parent=g14412.t1 #PROT g14412.t1 g14412 MRKGFYLSDREAKKHVVVHVSDDIGPHYECECGREFSSINKRVPKQHNCPGQPSAVDDDASDDSEGDSEGDTDGDTDGDSDRNTDGTTATTVAGVGVIGGRVGGRARTARTRLTRATAGGI* # ORIGINAL: g14415.t1 original gene structure, not modified by PASA NODE_289_length_27904_cov_42.4022 AUGUSTUS gene 22034 24582 . + . ID=g14415;Name=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS mRNA 22034 24582 . + . ID=g14415.t1;Parent=g14415;Name=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 22034 22127 . + . ID=g14415.t1.exon1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 22034 22127 . + 0 ID=cds.g14415.t1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 22223 22325 . + . ID=g14415.t1.exon2;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 22223 22325 . + 2 ID=cds.g14415.t1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 22584 22633 . + . ID=g14415.t1.exon3;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 22584 22633 . + 1 ID=cds.g14415.t1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 22789 22931 . + . ID=g14415.t1.exon4;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 22789 22931 . + 2 ID=cds.g14415.t1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 23200 24123 . + . ID=g14415.t1.exon5;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 23200 24123 . + 0 ID=cds.g14415.t1;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS exon 24379 24582 . + . ID=g14415.t1.exon6;Parent=g14415.t1 NODE_289_length_27904_cov_42.4022 AUGUSTUS CDS 24379 24582 . + 0 ID=cds.g14415.t1;Parent=g14415.t1 #PROT g14415.t1 g14415 MAIFERASRITRTDVSRFVSLIYGVIMMGVSGTLYGISAYSPDIKDTLGYKETDIQLISSIGDAGLKPYFLFITCRYISIPFGFFFDRFGHRPTAVLASITMATGYMLMWLFVKIELPRENAVAMGFALFLVGQGSIGALFAALIPNERNFLPRHKGKVTGLLFAGFGSSAAIFSAIYKNYFHGTESLRAYFIMLAAVASGVIILGAFIVNEIPIDEDSDESTASLLGGESVESARKSAATHGKAGQSKKPNEFERRDIYGWALLKSKAFWLLFWTLALAVGCALLYINNVGSLWKSLGGESGQQSNLVVVFSVLNVVSRVIFGTASDVFRAKISNATFLFIAVVIVTATQVGLLFLPLNWLYLAAVGIGLADGGFFSQYPVLLRVLFGNKHYGQNFGFLTVANGLGIFLFGPMAARLYDDKISTCASDGGCPPLIHIHAPDGSDTCIGRQCYRTAFIISSCAGALAIVVSYLFVLEVRRIRKADAEMDADDGYESRPPSYGIEE* # PASA_UPDATE: g14414.t1, single gene model update, valid-1, status:[pasa:asmbl_5201,status:3], valid-1 NODE_289_length_27904_cov_42.4022 . gene 17099 21073 . - . ID=g14414;Name=g14414.t1 NODE_289_length_27904_cov_42.4022 . mRNA 17099 21073 . - . ID=g14414.t1;Parent=g14414;Name=g14414.t1 NODE_289_length_27904_cov_42.4022 . five_prime_UTR 20955 21073 . - . ID=g14414.t1.utr5p1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 20875 21073 . - . ID=g14414.t1.exon1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 20875 20954 . - 0 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 20531 20645 . - . ID=g14414.t1.exon2;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 20531 20645 . - 1 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 20238 20348 . - . ID=g14414.t1.exon3;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 20238 20348 . - 0 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 20042 20126 . - . ID=g14414.t1.exon4;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 20042 20126 . - 0 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 19528 19867 . - . ID=g14414.t1.exon5;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 19528 19867 . - 2 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 18867 19249 . - . ID=g14414.t1.exon6;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 18867 19249 . - 1 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 18521 18584 . - . ID=g14414.t1.exon7;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 18521 18584 . - 2 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 18057 18147 . - . ID=g14414.t1.exon8;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 18057 18147 . - 1 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 17683 17880 . - . ID=g14414.t1.exon9;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 17683 17880 . - 0 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . exon 17099 17460 . - . ID=g14414.t1.exon10;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . CDS 17368 17460 . - 0 ID=cds.g14414.t1;Parent=g14414.t1 NODE_289_length_27904_cov_42.4022 . three_prime_UTR 17099 17367 . - . ID=g14414.t1.utr3p1;Parent=g14414.t1 #PROT g14414.t1 g14414 MVTKGLVVVLALAVCVCNSAPIGDKDEYLKARAELFEAEELMKSYNGISLTTNEDKANAVLMKLKRDELNQYADRDDFPPAIHFFDAQKAIEASPVYKAIQKMPKGGLLHVHVDSIVDSRWVVQTATYMEGCAICHLNGSTYFRFFPDKTVKDPSDRSAPFECTWTGVAEERAAAVSAEAYDDALYRLLTLVTEKPDEAYPTQSAVWGKFDGSIIAADGLINYRPFFELYFRKAFEDFAADNIQYVELRSLLGSVYEADGTLYDRHTVMALFQTAVSDAVKSTNGKFAGAKLIYCGLRAADADVVAAQMDDAIALAMKFPGFFAGFDLVGREDPGHTLVYFVDTFLASAEKQEKAGVRLSYFLHAGETNWEESGADDNLMDAVMLNTTRIGHGFALLHHPLVEEIVAERKIAVEVCPISNQVLKLVPDLRNHPASAYLDRGLPITINSDDPALFGSVGLSHDFYEAFMGFGGGRLDIRALKFMAQNSLQYSAMSSGERSVALAEFDARWAEFVDGLAAL* # ORIGINAL: g13901.t1 original gene structure, not modified by PASA NODE_1246_length_12772_cov_44.1057 AUGUSTUS gene 2776 5670 . + . ID=g13901;Name=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS mRNA 2776 5670 . + . ID=g13901.t1;Parent=g13901;Name=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 2776 2801 . + . ID=g13901.t1.exon1;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 2776 2801 . + 0 ID=cds.g13901.t1;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 3011 3155 . + . ID=g13901.t1.exon2;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 3011 3155 . + 1 ID=cds.g13901.t1;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 3562 5319 . + . ID=g13901.t1.exon3;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 3562 5319 . + 0 ID=cds.g13901.t1;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 5548 5670 . + . ID=g13901.t1.exon4;Parent=g13901.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 5548 5670 . + 0 ID=cds.g13901.t1;Parent=g13901.t1 #PROT g13901.t1 g13901 MIVSKSRARINRPCEVEDDASGCAPDPAMIDMGLPASFVGNAKRMRRKRRRRTTENSTEAHVTNGARDAENADGAYPVALDDPGWQSHWAEFMLTTRSGCNNNNSSNNTISNGGDVDRSSNGNRGKNGQNGDLADEQAAYEALEAEYWKRYYAYCARAHGDARDLVPCAGPDSSTVQQPKRRKTHVGVVGEEGDHVVALDGGGACADTATAAGEQETAPVAVRAVRTTRGGKRARRHKLKLAKILAEQGLECKQGVTAVTITHAHLSTLNARVTAHTESSGKQPCGNGGDFNGDGDGTEAIAAVCGELNAAAPSGLESAEKQSEEGTPTSPQLLNSGTTNQKKKKKNRRGKAGRRLPRDYDPVGGGWSGEWEVEGESTDAQGQSAHNADAWSWAPVDAACYGDGYEGHGGVEEQGDGDADDAPVAAAPYPSVVVGHKRLRKNPFGPAVAKYWAQRYRMFRLFDRGIMTDEEGIYSVTFEVIASHIARRFGALGSGADGVAGGAAGGLGSIPARNLPRFGNGMVVIDAFCGIGGNSVQFARTCSHVIAIDIDPVKLACAANNARVYGVEDRIDFILGDFMHLAPLLHADAVFLSPPWGGPDYLCADEYDIEMMIPMNGIKVYEAARKISPSIAYFLPRNPGVDQLMRLAGDGGLCEVEQNMVNNKTKAITAYYGGLVACADTAD* # PASA_UPDATE: g13903.t1, single gene model update, valid-1, status:[pasa:asmbl_944,status:3], valid-1 NODE_1246_length_12772_cov_44.1057 . gene 8973 11274 . - . ID=g13903;Name=g13903.t1 NODE_1246_length_12772_cov_44.1057 . mRNA 8973 11274 . - . ID=g13903.t1;Parent=g13903;Name=g13903.t1 NODE_1246_length_12772_cov_44.1057 . five_prime_UTR 11160 11274 . - . ID=g13903.t1.utr5p1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 11021 11274 . - . ID=g13903.t1.exon1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 11021 11159 . - 0 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 10647 10814 . - . ID=g13903.t1.exon2;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 10647 10814 . - 2 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 10355 10422 . - . ID=g13903.t1.exon3;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 10355 10422 . - 2 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 9952 10110 . - . ID=g13903.t1.exon4;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 9952 10110 . - 0 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 9686 9817 . - . ID=g13903.t1.exon5;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 9686 9817 . - 0 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 9449 9544 . - . ID=g13903.t1.exon6;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 9449 9544 . - 0 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . exon 8973 9244 . - . ID=g13903.t1.exon7;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . CDS 9134 9244 . - 0 ID=cds.g13903.t1;Parent=g13903.t1 NODE_1246_length_12772_cov_44.1057 . three_prime_UTR 8973 9133 . - . ID=g13903.t1.utr3p1;Parent=g13903.t1 #PROT g13903.t1 g13903 MVVLHVKKGDESLFLYQTTCDVPLDKLIPEVTAIHNARLRVERLCDAARDLSHHGVYLPPNMQGLTQDQIDEMHLVDDWGQKCRPMGGCVANPDPMGRRNGEAMPQHYADVIEKACAEALAVIHKNQVAANVCLNEKTIKDVISTIGGAITMAYPMGLPPHEVVRAILEDDEDLSGTQASQAVIDVSVAQLWWAGKELLKEKKLGDFIGRNEKTKIIVKIQKRGGGAPVREPAVDEETQKRLMALYYKKQEEFKKLESDESDAYLGAAWADTSSLKQHLRGVDNVSWRPR* # ORIGINAL: g13904.t1 original gene structure, not modified by PASA NODE_1246_length_12772_cov_44.1057 AUGUSTUS gene 11770 12280 . + . ID=g13904;Name=g13904.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS mRNA 11770 12280 . + . ID=g13904.t1;Parent=g13904;Name=g13904.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 11770 11866 . + . ID=g13904.t1.exon1;Parent=g13904.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 11770 11866 . + 0 ID=cds.g13904.t1;Parent=g13904.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 12105 12280 . + . ID=g13904.t1.exon2;Parent=g13904.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 12105 12280 . + 2 ID=cds.g13904.t1;Parent=g13904.t1 #PROT g13904.t1 g13904 MEGEETVHRRHGHSHADGVACSHSHAGPRGGRFKDEAAAIAALKEELDKTENIRFDAILWFAAAAFVFYVTDFANIVANHEAIDRSDSRV* # ORIGINAL: g13902.t1 original gene structure, not modified by PASA NODE_1246_length_12772_cov_44.1057 AUGUSTUS gene 7459 7755 . - . ID=g13902;Name=g13902.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS mRNA 7459 7755 . - . ID=g13902.t1;Parent=g13902;Name=g13902.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS exon 7459 7755 . - . ID=g13902.t1.exon1;Parent=g13902.t1 NODE_1246_length_12772_cov_44.1057 AUGUSTUS CDS 7459 7755 . - 0 ID=cds.g13902.t1;Parent=g13902.t1 #PROT g13902.t1 g13902 MLVARHNRTASVREAIVLLNSSEAALGKVAHEELSRICPDGRVHASKQPRFAKLIGDVWEKDVHSWTVDDVNTIVGARRARKAATSEEMREQLSIDNE* # PASA_UPDATE: g13900.t1, single gene model update, valid-1, status:[pasa:asmbl_943,status:12], valid-1 NODE_1246_length_12772_cov_44.1057 . gene 133 2206 . + . ID=g13900;Name=g13900.t1 NODE_1246_length_12772_cov_44.1057 . mRNA 133 2206 . + . ID=g13900.t1;Parent=g13900;Name=g13900.t1 NODE_1246_length_12772_cov_44.1057 . five_prime_UTR 133 171 . + . ID=g13900.t1.utr5p1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 133 281 . + . ID=g13900.t1.exon1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 172 281 . + 0 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 408 614 . + . ID=g13900.t1.exon2;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 408 614 . + 1 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 765 906 . + . ID=g13900.t1.exon3;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 765 906 . + 1 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 1049 1186 . + . ID=g13900.t1.exon4;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 1049 1186 . + 0 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 1339 1493 . + . ID=g13900.t1.exon5;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 1339 1493 . + 0 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 1633 1734 . + . ID=g13900.t1.exon6;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 1633 1734 . + 1 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . exon 1912 2206 . + . ID=g13900.t1.exon7;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . CDS 1912 1978 . + 1 ID=cds.g13900.t1;Parent=g13900.t1 NODE_1246_length_12772_cov_44.1057 . three_prime_UTR 1979 2206 . + . ID=g13900.t1.utr3p1;Parent=g13900.t1 #PROT g13900.t1 g13900 MKAFAILLLAALVAGTSAVRYALDKDVINTANSANAGWKAGLNGRFVGVTMAEAKALLGLRMDKKHNDNLPVIADVADAIPDTFDARTQWPGAIHPIRDQQQCGSCWAFAAAESLSDRYYIASNGAVDVVLSPQDMVSCDSTDYGCSGGYLTNAWQFIQGTGIVTDACYPYNSGSGTTGSCLLTGTTCPSGNGTVKYYKAKNVASIANNVAAIQTEIQKNGPIEVGFSVYEDFFSYTSGVYQQTSSQLAGGHAVKIIGWGTDAGTPYWLVANSWGSSWGEQGYFRILRGSDECGIEDQGIAGIPAL* # ORIGINAL: g3272.t1 original gene structure, not modified by PASA NODE_522_length_21884_cov_42.7688 AUGUSTUS gene 2 1322 . + . ID=g3272;Name=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS mRNA 2 1322 . + . ID=g3272.t1;Parent=g3272;Name=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 2 201 . + . ID=g3272.t1.exon1;Parent=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 2 201 . + 1 ID=cds.g3272.t1;Parent=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 336 423 . + . ID=g3272.t1.exon2;Parent=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 336 423 . + 2 ID=cds.g3272.t1;Parent=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 572 1322 . + . ID=g3272.t1.exon3;Parent=g3272.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 572 1322 . + 1 ID=cds.g3272.t1;Parent=g3272.t1 #PROT g3272.t1 g3272 DQQAALDTLPLALHEFPPRVRFALLPLVVKSGSPLAVAMSTCLSQGPIPSASHAFDVARVLCCAAQESIKDGSRFASILSEFKDRISDTTEQEGEGGMIANAKALVQETQSLLAQRALDPPVPRKKTAGVGAPRGGTLTAITLADADAADSAHVSDAPSESDSEVAVSAPVVVKRTVAKKEKRPVPVPVPITTSILASVNSNEAIVARNTKAEVKTAPAIARAIATNARTEKAAAPIAKKAPAARVTVVKLKAVPATARTSAIVQGDMLLDDDDEDDRMADAENIRGVIPNAAAVAVVTGSKTNTRTTDPKPVKKAATAAKKVAPQSRRTVPATFLSDDDNVIDF* # ORIGINAL: g3273.t1 original gene structure, not modified by PASA NODE_522_length_21884_cov_42.7688 AUGUSTUS gene 3316 3873 . + . ID=g3273;Name=g3273.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS mRNA 3316 3873 . + . ID=g3273.t1;Parent=g3273;Name=g3273.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 3316 3449 . + . ID=g3273.t1.exon1;Parent=g3273.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 3316 3449 . + 0 ID=cds.g3273.t1;Parent=g3273.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 3585 3873 . + . ID=g3273.t1.exon2;Parent=g3273.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 3585 3873 . + 1 ID=cds.g3273.t1;Parent=g3273.t1 #PROT g3273.t1 g3273 MPILAVDLTNCHWDRTNRAQRRLHTGCPRPNALTVDKRPAVDVSNIHVKLDKLDCHGICNLTVFYHEGITCIKLDGASNPIVKHSNSDHGGSVHLKYADGYGIDCIWLYSSALAVNIPEYPWDSVHQHPGCRKRTGDFNH* # PASA_UPDATE: g3277.t1, single gene model update, valid-1, status:[pasa:asmbl_7947,status:3], valid-1 NODE_522_length_21884_cov_42.7688 . gene 13414 17014 . - . ID=g3277;Name=g3277.t1 NODE_522_length_21884_cov_42.7688 . mRNA 13414 17014 . - . ID=g3277.t1;Parent=g3277;Name=g3277.t1 NODE_522_length_21884_cov_42.7688 . five_prime_UTR 16905 17014 . - . ID=g3277.t1.utr5p1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 15764 17014 . - . ID=g3277.t1.exon1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 15764 16904 . - 0 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 15421 15582 . - . ID=g3277.t1.exon2;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 15421 15582 . - 2 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 14918 15195 . - . ID=g3277.t1.exon3;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 14918 15195 . - 2 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 14585 14734 . - . ID=g3277.t1.exon4;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 14585 14734 . - 0 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 14205 14421 . - . ID=g3277.t1.exon5;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 14205 14421 . - 0 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 13904 13986 . - . ID=g3277.t1.exon6;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 13904 13986 . - 2 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . exon 13414 13756 . - . ID=g3277.t1.exon7;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . CDS 13664 13756 . - 0 ID=cds.g3277.t1;Parent=g3277.t1 NODE_522_length_21884_cov_42.7688 . three_prime_UTR 13414 13663 . - . ID=g3277.t1.utr3p1;Parent=g3277.t1 #PROT g3277.t1 g3277 MYSTRSLRSMAGGAERTNPITGAGYDPESDRPRQGHRVDAPVPRLNLDSVTMARDSAPVVVKPPQANSTYNAIKSREKEALEEHKARLHSQLYGPSSEYGGVAPLQQERGDRRSAAPSHGHASAPARDDRRGQPANAQRAAGAPPKDIHPASSHSAGGMIGGGTGHTKGADARSAHSLAKQSTSASANVSVHKDKRDSTQAHGAKKNGPFSSHAPSSKHTANDTHKSSAPSAPSGNRTAYATSGGKTVYVPSHPLYADPERERATELQMLEEALMFARDDARASIAADSSDSQLQKKLRLMEDAIASDELSNSLCDTPFVDPGPPPTRNDDGSRVGGRRGVPYESQFAYTGGLANAKRTATADQIFAPKVPFLARVVTKNGRDIHRELGGFFFVADGSVVVYEFRQFGQKTNVLPLFQRRVYRHPIGNRAGKPIGLSDVRVGNDLVFESALGRLPESMKEKPLVGFRVSEVDDAMRERLLSDFKARLSRSRDPALADIAGDIDLIGGPPAKKQMSKDEAVLEAARDQVRARIVARGGRGIVGIGRHFRSIDRNGDGCLDRGEFAKGLRDYGFKFDDKTLDVLFRSFDRDGSRTIEYDEFLRGVIGEMSEQRKSLVRKAFVKLDANKNGIIELDDIRKFYNAKRHPRVVSGECTEDEIMMQFLNVFDCVVRDGRVSYEEFEEYYEGVSMSIADDRYFALMMRNSWGVC* # ORIGINAL: g3279.t1 original gene structure, not modified by PASA NODE_522_length_21884_cov_42.7688 AUGUSTUS gene 20843 21579 . - . ID=g3279;Name=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS mRNA 20843 21579 . - . ID=g3279.t1;Parent=g3279;Name=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 21488 21579 . - . ID=g3279.t1.exon1;Parent=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 21488 21579 . - 0 ID=cds.g3279.t1;Parent=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 21248 21374 . - . ID=g3279.t1.exon2;Parent=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 21248 21374 . - 1 ID=cds.g3279.t1;Parent=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 20843 20956 . - . ID=g3279.t1.exon3;Parent=g3279.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 20843 20956 . - 0 ID=cds.g3279.t1;Parent=g3279.t1 #PROT g3279.t1 g3279 MRIFHSNQITLLNCRYPQPYYQHPYGVPPQGYPPQPYYGAPQPVYVQPRPTVIGAASFDPGFRLGPGSTANVPPPPPGYAPNAAQYATMTGGTAVMSQRYGVSDGGYTFF* # PASA_UPDATE: g3276.t1, single gene model update, valid-1, status:[pasa:asmbl_7949,status:12], valid-1 NODE_522_length_21884_cov_42.7688 . gene 10261 13162 . + . ID=g3276;Name=g3276.t1 NODE_522_length_21884_cov_42.7688 . mRNA 10261 13162 . + . ID=g3276.t1;Parent=g3276;Name=g3276.t1 NODE_522_length_21884_cov_42.7688 . five_prime_UTR 10261 10334 . + . ID=g3276.t1.utr5p1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 10261 10410 . + . ID=g3276.t1.exon1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 10335 10410 . + 0 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 10528 10588 . + . ID=g3276.t1.exon2;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 10528 10588 . + 2 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 10778 10892 . + . ID=g3276.t1.exon3;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 10778 10892 . + 1 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 11010 11124 . + . ID=g3276.t1.exon4;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 11010 11124 . + 0 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 11284 11909 . + . ID=g3276.t1.exon5;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 11284 11909 . + 2 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 12145 12240 . + . ID=g3276.t1.exon6;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 12145 12240 . + 0 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 12345 12617 . + . ID=g3276.t1.exon7;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 12345 12617 . + 0 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . exon 12797 13162 . + . ID=g3276.t1.exon8;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . CDS 12797 12985 . + 0 ID=cds.g3276.t1;Parent=g3276.t1 NODE_522_length_21884_cov_42.7688 . three_prime_UTR 12986 13162 . + . ID=g3276.t1.utr3p1;Parent=g3276.t1 #PROT g3276.t1 g3276 MGFCSKCGDVIRGGAGATCRCGGSAGETLTDFNEGKDNRGDNYSNAYLSSGLSQGVDAGLKRMLGITDAATEADCADCNKRLKGDGDIIPGRDDDKPYCEGCYAKRWALGNCEKCKKYVLGLGKEWVREGRQIWHIACYDGHACPTCNSVIMGQALSALGKNYHPSCFKCSDCKCALTDSFVNRNDEPYCKTCAAKVQTTPKKVAGGASSAGSSPAKAWGSSPNVGGGSGSGTGGNNSNNSNNAQSAAAANRSANNAAVDKRRAELDALKGVNAMDINEHCTKCGVIMHTDGVKTSHGSIFHEDCFVCHVCGEGFPEGRYAEKDGKIYHSECFKKANAPVCPLCNKALVSSFLNFNGAKIHPECFKCGGCQKSLAGVPFLERDSRPYCGTCIGAMSKVVTSTGPQKGGFTVNAVSGQKESRDYGGARVGGSVTVNPGQAPGCGRCGKQVYQAEKALGPGGNAWHKACMRCKECNAALDQGTLNENNGEAYCGGCHGKLFGPKGVGFAGGKAFLRPT* # ORIGINAL: g3278.t1 original gene structure, not modified by PASA NODE_522_length_21884_cov_42.7688 AUGUSTUS gene 17511 20513 . + . ID=g3278;Name=g3278.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS mRNA 17511 20513 . + . ID=g3278.t1;Parent=g3278;Name=g3278.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 17511 20513 . + . ID=g3278.t1.exon1;Parent=g3278.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 17511 20513 . + 0 ID=cds.g3278.t1;Parent=g3278.t1 #PROT g3278.t1 g3278 MSTRVPGSIRRVQAVGSAAAPSPTQVTTTQNATTTSSQPRRQLSKQGSLATGSSEVVTVPPRRQLGSLANATAREMRRMNSEVDEESDIADGQSSVGTADTLNPTRSMKRNQRRSVRRLEKRMSTVRDVVGATGDMSLDEMLATEPAKQAPAPRVPPAPLSSAGSGQMTLEEYGPIERLDGPSREKWLRKTLLQFVVKDELDRFFADPRWIGEGHPNLLSMVYEKLVRMPMFAHRGPSFRTVLDRFLLFLPDFNMRYFKATGHDFSKRMINGIAGSLTMSLQSSEERKKFKRANRAKNASIDGTATATTPMPTPSSSSASGPSGPTGKPKPKEKGARRREFLDAISAVLLDVESEAGLKALLDSIAAAHSVHDLPPSLRRVFNLQMDMLTSKINKIRDERDVKSFKRTFHSMPRRSIMALLKVAQPATLLKGLFALASSSAFGGVNAMQRLFEGRIGLSACEEDLAAAARKIDLAVHERIRALVKSKLVYDVLGFVPANVVAYVDGIAIVGGTPHSATRADVAAVGRNAFANRKWSDNELRAVHVVIVLEIRYRDKVHFIDAVAGPAVNELLDEVLPALQELLGDMINTGGFSRFISRVFEAWEGLVETVDDSTLTEDARLRRIQSSVGMLQDAMYQFLHRAIIHDTGSVRELLVWLVTSQYRASAGFDIKPLVDTLPTGIVAADATSAPAMASSSTSPASAATVPGVPASTHTGLSADSTAESADEGPLRRALWAELDRIAHYHRFVIKGKGGKDVMCRPPPPPMHVKVVPILLPQFHGMLLDHLKTEDSSVYSQALRRVSRSLGLARGGKSVAGIVLPQRQSTLAVTHIELTYGQDVGPYLQSEGWQRTYHDLKSGTGASSIFLYYKTSLLANPTRDQSVSGIAGGSAQLKRQESDATPTQLNIDPITTVIVSASSAEDESLLRLGFVRIQQNLNKGTFGRKLNVWYKRGEPDKKPIVALATSAGKDSELSKDGFVRIDVSTNKGNMGKPVFIWYKRG* # PASA_UPDATE: g3275.t1, single gene model update, valid-1, status:[pasa:asmbl_7945,status:13],[pasa:asmbl_7946,status:12], valid-1 NODE_522_length_21884_cov_42.7688 . gene 5538 9752 . - . ID=g3275;Name=g3275.t1 NODE_522_length_21884_cov_42.7688 . mRNA 5538 9752 . - . ID=g3275.t1;Parent=g3275;Name=g3275.t1 NODE_522_length_21884_cov_42.7688 . exon 8553 9752 . - . ID=g3275.t1.exon1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . CDS 8553 9752 . - 0 ID=cds.g3275.t1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . exon 7782 8318 . - . ID=g3275.t1.exon2;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . CDS 7782 8318 . - 0 ID=cds.g3275.t1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . exon 7383 7460 . - . ID=g3275.t1.exon3;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . CDS 7383 7460 . - 0 ID=cds.g3275.t1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . exon 6681 7214 . - . ID=g3275.t1.exon4;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . CDS 6681 7214 . - 0 ID=cds.g3275.t1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . exon 5538 6495 . - . ID=g3275.t1.exon5;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . CDS 6361 6495 . - 0 ID=cds.g3275.t1;Parent=g3275.t1 NODE_522_length_21884_cov_42.7688 . three_prime_UTR 5538 6360 . - . ID=g3275.t1.utr3p1;Parent=g3275.t1 #PROT g3275.t1 g3275 MSRTPNIANRTTYDPVYRADGTRLYGLDAEIEKKLQAKRDDKYERDILEWISAVLEEPISPMDDVGECLKSGIVLCKLVNKISPDSIKKYNTKSVPLLEMENIGLYLKACWKLNVPSEDLFVTSDLYKKQGIAQVVQNIASLARIAQSLPSYTGPPFGPKASPRTPVVKHWEVEQPRYEHITEIERRDVEALISPRPIRAARMAQTPQTPDFSRAPGQRVPLSLDSSLPVSRFSLSDDGASTSLTASSGALGMRVSKVETSVGLLSSEVEGLRAKLTTQPCGRCHGANATAASTHTTTVVATSPRTSDAMPTPPSPGRASRQPQLRVIVEDASATVPIIVLEDVNNAPAVALVAAKVPADAPAVIAEVAQLRNELALMREMFKELRSELAGERAIRAELENKHSSLANDFVVLRESLSQTSDGLLTTVESLGEKVQRLLDRGPSSSHARARSVPGDRFSMTSLDGPVTFGRQESSMDNDDAILLGRSSAMNSEELFFLQQCVTRILLSHSVEFTDVARVGSIFRTDAGRREATRILKRAIKEVPSLTLSESAFELMLYLLNAMLGEMDSDHRKDLIAAKIIMYTAEILNRKGTDGRTEHIRDFIKAHDIWRNLRLWEECFWSELALAYADRVSEAATQPTSSGAPLSSPSTGSLADGQDVSVAVLKQFATDMVSWAVPVESIRQFVTSMCAASGLPDDSVRLTIFALVDEHAEALGGKDARAVAEKMAAQSANRRKRAASQRRRSSLSASTEMPHSHEFVKTHFSAPTYCQVCTNFIWGLGKQGYQCGVCHLRVHKKCLDRLPIQPSIASGSPPASAGTSLGVTLIH* # ORIGINAL: g3274.t1 original gene structure, not modified by PASA NODE_522_length_21884_cov_42.7688 AUGUSTUS gene 3916 4362 . - . ID=g3274;Name=g3274.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS mRNA 3916 4362 . - . ID=g3274.t1;Parent=g3274;Name=g3274.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS exon 3916 4362 . - . ID=g3274.t1.exon1;Parent=g3274.t1 NODE_522_length_21884_cov_42.7688 AUGUSTUS CDS 3916 4362 . - 0 ID=cds.g3274.t1;Parent=g3274.t1 #PROT g3274.t1 g3274 MLLWTLPSLRCQCMSTRPPATSSWLQTTTSRPIRKPFACLKKEPPLWWMLTRTAXXXIAADTETFCVLEEGAAPVVDVDEDCDFKLVADNDIAADTETFCVLEVGAAPVVDVETDEDCNFKLDTDNDIAEAVCVREVRAAHVEDVDEA* # ORIGINAL: g2748.t1 original gene structure, not modified by PASA NODE_6694_length_523_cov_136.342_potentialcontaminant AUGUSTUS gene 1 523 . - . ID=g2748;Name=g2748.t1 NODE_6694_length_523_cov_136.342_potentialcontaminant AUGUSTUS mRNA 1 523 . - . ID=g2748.t1;Parent=g2748;Name=g2748.t1 NODE_6694_length_523_cov_136.342_potentialcontaminant AUGUSTUS exon 1 523 . - . ID=g2748.t1.exon1;Parent=g2748.t1 NODE_6694_length_523_cov_136.342_potentialcontaminant AUGUSTUS CDS 1 523 . - 2 ID=cds.g2748.t1;Parent=g2748.t1 #PROT g2748.t1 g2748 VVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSSLHTHLRHVRLFHLWAMYNRMYIEDAQFRDEVRATIPVERLVLYAFDRSLQDLSAFEGVHSALFLFIRNGLAASCNTTDLSPLKNVHTVQIEVTREGPAESLAPLADVKVIRLSKRGIVPSFVKAQSVDLYSAHIDLNGL # ORIGINAL: g9997.t1 original gene structure, not modified by PASA NODE_764_length_17994_cov_37.7903 AUGUSTUS gene 14555 17047 . - . ID=g9997;Name=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS mRNA 14555 17047 . - . ID=g9997.t1;Parent=g9997;Name=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 16768 17047 . - . ID=g9997.t1.exon1;Parent=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 16768 17047 . - 0 ID=cds.g9997.t1;Parent=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 15612 16291 . - . ID=g9997.t1.exon2;Parent=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 15612 16291 . - 2 ID=cds.g9997.t1;Parent=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 14555 15379 . - . ID=g9997.t1.exon3;Parent=g9997.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 14555 15379 . - 0 ID=cds.g9997.t1;Parent=g9997.t1 #PROT g9997.t1 g9997 MGSVQTAVVGRRYLWAACALSLVGLVLSITAIALRTSERSRNQPSFDYGVVLDAGSSHTNLFVYTWTHHVTPGTERITAAPALSQHKWTCKSKVAGISSFASPADAAASIAPLLACAQGYIPSPSHSTTPVFLGATAGMRLLYLSNSTLGDAIMVAVCGALSASPFAYSQGSCRVLSGAEEGLYGWITANYLLGNYGEPPLATPHPGASRSLVSRALALASSVLGAVASPAPNIRGIRGIRAADAGGVGISPMESACLGALDLGGASTQITFVPLDVSVVTDGDRQDVTLFNNGYDVYAHSYLGLGLDQARDAFEAAIVTGAGNSTTVADPCLPVGYNRTMTSAFNDSPVTLFGVGNPADCSARVSALIRKDECTCTSCGIGGACQPPPRGLYFAFAGYAFAAAYLNVSSYSFVGPSQLDARSDVLCALPWEQWVKTAGVSSFVTANSCFSAKYAYALLVRGYGFAANDNTVRFSTTAAGSDMGWALGYMLDETGVLPVFAQPKPSPLISTGGFAALLSLGLVTLASGVGVGVYLWRLSGSGADHEYDPINSSEGWVDWRQSHLMVTVVLTSVIGTLIIRNVIISGSFLGEKRE* # PASA_UPDATE: g9995.t1, single gene model update, valid-1, status:[pasa:asmbl_9258,status:12], valid-1 NODE_764_length_17994_cov_37.7903 . gene 5002 5787 . - . ID=g9995;Name=g9995.t1 NODE_764_length_17994_cov_37.7903 . mRNA 5002 5787 . - . ID=g9995.t1;Parent=g9995;Name=g9995.t1 NODE_764_length_17994_cov_37.7903 . five_prime_UTR 5721 5787 . - . ID=g9995.t1.utr5p1;Parent=g9995.t1 NODE_764_length_17994_cov_37.7903 . exon 5506 5787 . - . ID=g9995.t1.exon1;Parent=g9995.t1 NODE_764_length_17994_cov_37.7903 . CDS 5506 5720 . - 0 ID=cds.g9995.t1;Parent=g9995.t1 NODE_764_length_17994_cov_37.7903 . exon 5002 5128 . - . ID=g9995.t1.exon2;Parent=g9995.t1 NODE_764_length_17994_cov_37.7903 . CDS 5044 5128 . - 1 ID=cds.g9995.t1;Parent=g9995.t1 NODE_764_length_17994_cov_37.7903 . three_prime_UTR 5002 5043 . - . ID=g9995.t1.utr3p1;Parent=g9995.t1 #PROT g9995.t1 g9995 MEPPSSASGAGNAGAKAYQRTVPHLPWYRREFKTGQKIAVGFVVLLAAMVYPAMIHPFIFSKKYKKIQEENRAFFQKRDAAGNAIKPEYAENPFANKAR* # ORIGINAL: g9994.t1 original gene structure, not modified by PASA NODE_764_length_17994_cov_37.7903 AUGUSTUS gene 968 4459 . + . ID=g9994;Name=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS mRNA 968 4459 . + . ID=g9994.t1;Parent=g9994;Name=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 968 1084 . + . ID=g9994.t1.exon1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 968 1084 . + 0 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 1381 1435 . + . ID=g9994.t1.exon2;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 1381 1435 . + 0 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 1974 2041 . + . ID=g9994.t1.exon3;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 1974 2041 . + 2 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 2274 2331 . + . ID=g9994.t1.exon4;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 2274 2331 . + 0 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 2676 3145 . + . ID=g9994.t1.exon5;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 2676 3145 . + 2 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 3465 3646 . + . ID=g9994.t1.exon6;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 3465 3646 . + 0 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 3853 3966 . + . ID=g9994.t1.exon7;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 3853 3966 . + 1 ID=cds.g9994.t1;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 4297 4459 . + . ID=g9994.t1.exon8;Parent=g9994.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 4297 4459 . + 1 ID=cds.g9994.t1;Parent=g9994.t1 #PROT g9994.t1 g9994 MVDAAELNKLKVPELKAKLQDLGLSVAGLKKDLVDRLKKALDEQEAGSAAPESDNTKDEEMKEAEPEAKAEEEPISISQQTESAAETPAKSTPNGRKRKAAAVEEKVEDAPDAVTPVAKKAKTDDIAAAVTQREGASTHAPAPAASEAAPETQTAPAVHAAPETTSQQTESDQHAHAPASAHPPAPAPATTETPHAVDNAKEEPSAPRVATTATLHVANFVRPFTLPQVHALLKQSAPFKDGSFWMDSIKSQCYVTYNSVDDATSSLRHLDGLKWPSTNPKHLKVTCVSEEEAAAAIEGSKKKTTAAPTEAHADADRSEDRLAEEREREKERLAERDRQNKLLEQKMRDVELQRRASIEGKAAEKSAAKSLDDLFRKTKALPHLYYLPLTDAEVSERKAATAATAARK* # ORIGINAL: g9996.t1 original gene structure, not modified by PASA NODE_764_length_17994_cov_37.7903 AUGUSTUS gene 6096 13291 . + . ID=g9996;Name=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS mRNA 6096 13291 . + . ID=g9996.t1;Parent=g9996;Name=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 6096 6239 . + . ID=g9996.t1.exon1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 6096 6239 . + 0 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 6726 8851 . + . ID=g9996.t1.exon2;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 6726 8851 . + 0 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 9207 9359 . + . ID=g9996.t1.exon3;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 9207 9359 . + 1 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 9637 10273 . + . ID=g9996.t1.exon4;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 9637 10273 . + 1 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 10606 11378 . + . ID=g9996.t1.exon5;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 10606 11378 . + 0 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 11580 11737 . + . ID=g9996.t1.exon6;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 11580 11737 . + 1 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 11890 12013 . + . ID=g9996.t1.exon7;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 11890 12013 . + 2 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 12344 12465 . + . ID=g9996.t1.exon8;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 12344 12465 . + 1 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 12827 12997 . + . ID=g9996.t1.exon9;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 12827 12997 . + 2 ID=cds.g9996.t1;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS exon 13203 13291 . + . ID=g9996.t1.exon10;Parent=g9996.t1 NODE_764_length_17994_cov_37.7903 AUGUSTUS CDS 13203 13291 . + 2 ID=cds.g9996.t1;Parent=g9996.t1 #PROT g9996.t1 g9996 MQSLIVASQSIGHVLPSAASIAVDTETASLFVVSDTHELAVYDLDTLTEKGNALLGTGDDELPPNAIVTCSHFVAEEQRLVVAFSTGDVFAVTPDCACVDSVGHVESGILAMQFSPDNELVVCATGARTVLLMTSQYDVICETPFDTASFGEAAPVTVGWGSAETQFKGPQARLRQESDAEVVTGGSLKEGGERSSAAAADRRAAVTWRGDGQYFAVSFPGDIGAPSLSRAVRVYTREGHLHATAESVEGLSSALSWRASGGLFASTQRRPHRHEVIFFERNGLRHGEFPLPFAPAHVTVVSVAWNMDSTVLAVHVERTLEGTAFATLHANPSSTPNPNPSHTPAGHQPPPSSAVLLYVTGNYHWYLAQSLVFGGDATAASDGSRVTCMVWDSESPRTLHITTSAGVYSRHSFTFATLATHGGHVGNASTVAVIDGARLLITPLARMVVPPPMSASACTAPRPVRAVSFAPPEAGFGPGRLLCLLSDGSLCAFATRGCKLDEAPRLLGVLPPPHPPRVGLGGVVASGHIAWYAENQAIVVHTVTADAAGAYGIKSHPGGCFDVVSRVDVILGETSFQAVARDPMYLGVGRILCVAPDAKTSSVLLSTSDGHVLRLATSDSVNGSGLDVTWRASFPQPLVRLQPAHMGVAGEFPNVFGLTERGRLWTIGGGGGDGGHVPVEVSAQCTSFAVHDEFVLFTTVSHTCRLIPLAISPGDVDALVRAWASELAVAAAHGVDVHAAPERVGDPSLRRVERGSRIVVACPGTTRVVFQMPRGNLEAVNPRALVLASVRRNLALGDYRRAMLEIRRHRIDPNIVYDASPESFSAHVTDFVLSVNSVGLLNLFLSELRDEDVCVTSYPELWWAHTARARLGEAPADASTVAESANRFRVGHSPGKVDRVCALVVSAIDALEGGGDAFFLSTLTALVRRSPPDLPGALERVRQLRERCVSDASFVGAVPATVSTTAGHGTAIIGEDPRPVTPDVALRYLSFLTDVTRMYDAALGTYDFDLVMMVAEVSHMGCMVECVNTKFECFHCAFMLNWLLKPLFLPFVESHSDALFLLCIVVPQQDPKEYIPFLNGIRRLPDEWERRFAIDDHLGRRRKALENVARIGGSNGGVNIADGAVVERALAYAAQHGLEAAAWTIYMHATAPGSPAFVAAGALFAARLERDGRHSDAASLFSACGMTSRAVDAYVEAGDWRMAMTHAAQMTLERESAPLSTTHAVARECVRKLTSLGRHVDAGQVLVTYLNDVEDGVASMVKGTDYALALAECARAGRRDLLETHVMPAVLDAHEAAEANVTEWSQKAERYIARLAVVRTLKQQGDDRSAAFAEDGAANDDTDLFSDAGSVVSTSRSRISSSNRSSGSSRSSKSSRKRQERKKYSLREGNPFEEEALVDAISQIVSATDKFQDDITSLLRASVHFGHIVEARRLQSAYARLLVCLRDALPAVFAPVVSTGAAVHATPQNINTTPSPPLIAPTLRAGDGWRVVFLDDGV* # PASA_UPDATE: g4818.t1, single gene model update, valid-1, status:[pasa:asmbl_3169,status:12], valid-1 NODE_198_length_32083_cov_41.9933 . gene 20832 22512 . + . ID=g4818;Name=g4818.t1 NODE_198_length_32083_cov_41.9933 . mRNA 20832 22512 . + . ID=g4818.t1;Parent=g4818;Name=g4818.t1 NODE_198_length_32083_cov_41.9933 . five_prime_UTR 20832 20911 . + . ID=g4818.t1.utr5p1;Parent=g4818.t1 NODE_198_length_32083_cov_41.9933 . exon 20832 21592 . + . ID=g4818.t1.exon1;Parent=g4818.t1 NODE_198_length_32083_cov_41.9933 . CDS 20912 21592 . + 0 ID=cds.g4818.t1;Parent=g4818.t1 NODE_198_length_32083_cov_41.9933 . exon 21697 22512 . + . ID=g4818.t1.exon2;Parent=g4818.t1 NODE_198_length_32083_cov_41.9933 . CDS 21697 22275 . + 0 ID=cds.g4818.t1;Parent=g4818.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 22276 22512 . + . ID=g4818.t1.utr3p1;Parent=g4818.t1 #PROT g4818.t1 g4818 MTVARAQSEYQRSFQWIGPKGAQQGPPAAGYPTGLPVGPATTVPLTHVTHVPTLAPSHTHYAPPSARHYDDHSYTDATPRGRNDLPASASPVPRIVIPERPEVSGDRPDVSQRYGRGERTPRSAPAVDPRDEYRPASAVDAPRAQPMMSEYQTNYNRKYKLPVDTPNAIAAARSQEVRKSHLEIPHVPSEVHVAPMTEYQRQYCHLYPTVAAERDARRQVRVTEEPEVLPRSAPAAGYARTAAARAPVIDVASIPPLPMSGAQFGEPLSGSLYGQRSEYETRFRPWNEYEYADGAFRHVGGSAGDATWLTQVRELREMAQLNKDRHVRRYVSEWQAQRKALQDDMYDARPDNASNANGHANVDTTGSESTRSASRRSNAGSTVPSGPSHDHGDNHPYGASGQSGASRLDDSDSRQGWVG* # PASA_UPDATE: g4819.t1, single gene model update, valid-1, status:[pasa:asmbl_3173,status:3], valid-1 NODE_198_length_32083_cov_41.9933 . gene 22513 25056 . - . ID=g4819;Name=g4819.t1 NODE_198_length_32083_cov_41.9933 . mRNA 22513 25056 . - . ID=g4819.t1;Parent=g4819;Name=g4819.t1 NODE_198_length_32083_cov_41.9933 . five_prime_UTR 24949 25056 . - . ID=g4819.t1.utr5p1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 24836 25056 . - . ID=g4819.t1.exon1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 24836 24948 . - 0 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 24535 24625 . - . ID=g4819.t1.exon2;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 24535 24625 . - 1 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 24135 24414 . - . ID=g4819.t1.exon3;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 24135 24414 . - 0 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 23636 23746 . - . ID=g4819.t1.exon4;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 23636 23746 . - 2 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 23328 23431 . - . ID=g4819.t1.exon5;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 23328 23431 . - 2 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . exon 22513 23139 . - . ID=g4819.t1.exon6;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . CDS 22837 23139 . - 0 ID=cds.g4819.t1;Parent=g4819.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 22513 22836 . - . ID=g4819.t1.utr3p1;Parent=g4819.t1 #PROT g4819.t1 g4819 MARAAFLSAGLLCAVLACVSLQFAAAETSPMVAWASNDVFMGRHSHPIRSILGSADVDVLATALAGGKVSDIPTGLEGVLASSSKLGAVVVFVQDALSMGDISAYCGAYGNSDAPYSDVRTLTTLAKSSVVASRIESNGNVAEDVIARITSKIDGRVYQWSGAESYEPTPARTDLIVVRLDAADGLSGADKTAALARNDKTIKDVSTHVLAATSAKYAGVLLAERASSSFYSKASPRTVHSRRAAEGVAATESSSDDSTFDPQQAADGGQLVGGYAMDDDTSGWVFFTFPIFMGIITMFLLILILLLGVGALFSLQTPSRFDDPRGKPIQLGK* # PASA_UPDATE: g4814.t1, single gene model update, valid-1, status:[pasa:asmbl_3167,status:12], valid-1 NODE_198_length_32083_cov_41.9933 . gene 707 1935 . + . ID=g4814;Name=g4814.t1 NODE_198_length_32083_cov_41.9933 . mRNA 707 1935 . + . ID=g4814.t1;Parent=g4814;Name=g4814.t1 NODE_198_length_32083_cov_41.9933 . five_prime_UTR 707 716 . + . ID=g4814.t1.utr5p1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . exon 707 873 . + . ID=g4814.t1.exon1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . CDS 717 873 . + 0 ID=cds.g4814.t1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . exon 957 1043 . + . ID=g4814.t1.exon2;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . CDS 957 1043 . + 2 ID=cds.g4814.t1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . exon 1129 1203 . + . ID=g4814.t1.exon3;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . CDS 1129 1203 . + 2 ID=cds.g4814.t1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . exon 1350 1456 . + . ID=g4814.t1.exon4;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . CDS 1350 1456 . + 2 ID=cds.g4814.t1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . exon 1536 1935 . + . ID=g4814.t1.exon5;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . CDS 1536 1763 . + 0 ID=cds.g4814.t1;Parent=g4814.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 1764 1935 . + . ID=g4814.t1.utr3p1;Parent=g4814.t1 #PROT g4814.t1 g4814 MINIFGILSGSLLAVSMATEAIVPEECVVAFQRVDVAGKGRVASWEVKAALEILGLDVSDERLFTLTCQCHTSTVTTASGYDFSAFLDIVSLCRAENSSDTSEDDTVNAFVALGGRHDKSGKVKVSLLLKYIKEFELTLDVEPFLKDGSDKSSYVTYEEFKGMLNQPVRLPSTLSANGAGRQPKAVKKATPVSPRHHNAGRGARPLKKHVPGAKLAP* # PASA_UPDATE: g4816.t1, single gene model update, valid-1, status:[pasa:asmbl_3172,status:3], valid-1 NODE_198_length_32083_cov_41.9933 . gene 7149 8753 . - . ID=g4816;Name=g4816.t1 NODE_198_length_32083_cov_41.9933 . mRNA 7149 8753 . - . ID=g4816.t1;Parent=g4816;Name=g4816.t1 NODE_198_length_32083_cov_41.9933 . five_prime_UTR 8658 8753 . - . ID=g4816.t1.utr5p1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . exon 8544 8753 . - . ID=g4816.t1.exon1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . CDS 8544 8657 . - 0 ID=cds.g4816.t1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . exon 8282 8419 . - . ID=g4816.t1.exon2;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . CDS 8282 8419 . - 0 ID=cds.g4816.t1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . exon 7827 8013 . - . ID=g4816.t1.exon3;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . CDS 7827 8013 . - 0 ID=cds.g4816.t1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . exon 7149 7340 . - . ID=g4816.t1.exon4;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . CDS 7204 7340 . - 2 ID=cds.g4816.t1;Parent=g4816.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 7149 7203 . - . ID=g4816.t1.utr3p1;Parent=g4816.t1 #PROT g4816.t1 g4816 MLLSGAKMPLKVAVLGSDGVGKTSLIEAFVDKAPLRATYVPTIEDIYEVYIETAKGKVETLHIVDTSGSPTSAQMRQFYIKRAQALILVYDIRSEDSFRYVMELHNEIEQVRGKYAPVFVVGNKLDLDSERTVDPNDAREWANMHGVDFAEMSARNIEDAARPFLEVCRNTTSAKGVKRKVSMKASARPTT* # ORIGINAL: g4821.t1 original gene structure, not modified by PASA NODE_198_length_32083_cov_41.9933 AUGUSTUS gene 31154 31681 . - . ID=g4821;Name=g4821.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS mRNA 31154 31681 . - . ID=g4821.t1;Parent=g4821;Name=g4821.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 31471 31681 . - . ID=g4821.t1.exon1;Parent=g4821.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 31471 31681 . - 0 ID=cds.g4821.t1;Parent=g4821.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 31154 31374 . - . ID=g4821.t1.exon2;Parent=g4821.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 31154 31374 . - 2 ID=cds.g4821.t1;Parent=g4821.t1 #PROT g4821.t1 g4821 MQQLRREPLRQLVCDDSHINRVVIRRYLESVCDNTAVDEAENGAQAVDLASQQQYDVIWMDVQMPFVNGVDATTAIRAGGRSRHTVVVGVTGNVMADEVSQYLAAGMQCVLRKPITRKSIKLVMDQMHLLGEPKDTSPHPPRP* # PASA_UPDATE: g4815.t1, single gene model update, valid-1, status:[pasa:asmbl_3168,status:3], valid-1 NODE_198_length_32083_cov_41.9933 . gene 2897 7138 . + . ID=g4815;Name=g4815.t1 NODE_198_length_32083_cov_41.9933 . mRNA 2897 7138 . + . ID=g4815.t1;Parent=g4815;Name=g4815.t1 NODE_198_length_32083_cov_41.9933 . five_prime_UTR 2897 2977 . + . ID=g4815.t1.utr5p1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 2897 3119 . + . ID=g4815.t1.exon1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 2978 3119 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 3230 3287 . + . ID=g4815.t1.exon2;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 3230 3287 . + 2 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 3376 3493 . + . ID=g4815.t1.exon3;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 3376 3493 . + 1 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 3771 3959 . + . ID=g4815.t1.exon4;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 3771 3959 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 4122 4262 . + . ID=g4815.t1.exon5;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 4122 4262 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 4402 4612 . + . ID=g4815.t1.exon6;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 4402 4612 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 4837 4927 . + . ID=g4815.t1.exon7;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 4837 4927 . + 2 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 5044 5188 . + . ID=g4815.t1.exon8;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 5044 5188 . + 1 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 5349 5507 . + . ID=g4815.t1.exon9;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 5349 5507 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 5638 5826 . + . ID=g4815.t1.exon10;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 5638 5826 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 5973 6110 . + . ID=g4815.t1.exon11;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 5973 6110 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 6290 6405 . + . ID=g4815.t1.exon12;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 6290 6405 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 6583 6730 . + . ID=g4815.t1.exon13;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 6583 6730 . + 1 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . exon 6890 7138 . + . ID=g4815.t1.exon14;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . CDS 6890 7084 . + 0 ID=cds.g4815.t1;Parent=g4815.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 7085 7138 . + . ID=g4815.t1.utr3p1;Parent=g4815.t1 #PROT g4815.t1 g4815 MATEAGMQFAPFASAVDIAFWHALSKQKLENFKLDETPRPIWGSYAMAEFQVPASLQVGPNAFEEPKAGASQGRQYPVPGTIYNTNTMDSFKALDKKALLDECGAQIWDDIVSGRAAQSPSLLSRFLLVAHADLKKHHFFYWFAFPALVLEGVTCQASQPLAEAFSEKQRDAISAGHTALGDGGSHFVIRIGGDGGVAVGPLAQWAEWHASGDASEILLGFADPCPLPSNPGWPLRNLLVAALAHGTQRPGPTLRVVCFRGARRDGAFDSSSSIVQTLGLPEGSISVRPKIVGWEKNVRDKLGPRMVDLSATMDPARLAETAVTLNLQLMRWRLLPSLDLERIAGTRCLLLGAGTLGCNVARCLMGWGVRKITFVDSGAVSFSNPARQSLFEFEDCLAGGKPKAKAAAEHLKKIFPGMDSEGVSMSIPMPGHAVSEESAASVRADVVRLEGLIDDHDVVFLLMDTRESRWLPSVIASSRGKWVINSALGFDSYLVMRHGARRRSADGSDYAPSLGCYFCNDVMAPANSMRDRTLDQQCTVSRPGLSFIAAASAVELLVSLTQHADGIFAPADVTGGSTSQPLGLIPHQIRGFLSNFTNVLPHGHAFDKCTACSSVVIAAYRERGFEFLRKAFDSPTYLEELTGLAELHRASEAAEVWDMEEDSDGDGDGDGDDAGPSTD* # ORIGINAL: g4820.t1 original gene structure, not modified by PASA NODE_198_length_32083_cov_41.9933 AUGUSTUS gene 26504 30888 . + . ID=g4820;Name=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS mRNA 26504 30888 . + . ID=g4820.t1;Parent=g4820;Name=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 26504 26657 . + . ID=g4820.t1.exon1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 26504 26657 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 26809 26888 . + . ID=g4820.t1.exon2;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 26809 26888 . + 2 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 26994 27118 . + . ID=g4820.t1.exon3;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 26994 27118 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 27263 27474 . + . ID=g4820.t1.exon4;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 27263 27474 . + 1 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 27649 27720 . + . ID=g4820.t1.exon5;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 27649 27720 . + 2 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 27926 28085 . + . ID=g4820.t1.exon6;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 27926 28085 . + 2 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 28290 28425 . + . ID=g4820.t1.exon7;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 28290 28425 . + 1 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 28657 28755 . + . ID=g4820.t1.exon8;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 28657 28755 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 28910 29007 . + . ID=g4820.t1.exon9;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 28910 29007 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 29180 29603 . + . ID=g4820.t1.exon10;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 29180 29603 . + 1 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 29713 29815 . + . ID=g4820.t1.exon11;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 29713 29815 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 29946 30064 . + . ID=g4820.t1.exon12;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 29946 30064 . + 2 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 30264 30358 . + . ID=g4820.t1.exon13;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 30264 30358 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 30475 30562 . + . ID=g4820.t1.exon14;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 30475 30562 . + 1 ID=cds.g4820.t1;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS exon 30772 30888 . + . ID=g4820.t1.exon15;Parent=g4820.t1 NODE_198_length_32083_cov_41.9933 AUGUSTUS CDS 30772 30888 . + 0 ID=cds.g4820.t1;Parent=g4820.t1 #PROT g4820.t1 g4820 MASHNSSPVHKRRRVESESTVQSFDDQDVRRINVLRCLGADMPTAANSGHPGAPMGCAPMAYLLWTRHMHYNPTNPKWLGRDRFVLSNGHACALQYSILHLTGYNVSLDDLKNFRKVGSKTPGHPENFVTDGIEVTTGPLGQGFSNAVGLAIGEAHLAATFNRPGFELFNNHTFVIMGDGCHQEGVTSEAASLAGHLKLNRLIVLYDDNKITIDGETELSFTEDVNMRFDAYGWNTITVENGNTDLAALDTAIAAAKESDRPTLIKVRTTIGFGSKAEGTEGVHGAPLKTDDLAQVKQKFGLDPTKSFQVPEDVLAYYRGAVTKGAERESRWNTLFAQYTAQFPELAAEITRRFSGTLPANWEAALPRYTPASPAAGTRKFSEEVLNALAPVVPEIVGGSADLTPSTLTWMKCTHDFQAHTPEGRYLRYGVREHGMAAVVNGLAAYGGLIPFGATFFNFVGYALGAVRLSALSHFRCFYVMTHDSIGLGEDGPTHQPVEALASVRAMPNMLVVRPADGNEVSGAYAVALENSRRPTTLVLSRQNVPNLPNSSIDGVRKGAYVIADADQPQVILIGTGTEVALCIEAKAKLTDLRVRVVSMPSMELFEEQTPEYRRSVLLAGVPILSVEAGATFGWQKYSHAQHGMTTFGASGPLKDVLKHFGFTADNIAAKTQKLVAFFQSKAVPDLLDRVPL* # PASA_UPDATE: g4817.t1, single gene model update, valid-1, status:[pasa:asmbl_3170,status:12], valid-1 NODE_198_length_32083_cov_41.9933 . gene 9155 20513 . + . ID=g4817;Name=g4817.t1 NODE_198_length_32083_cov_41.9933 . mRNA 9155 20513 . + . ID=g4817.t1;Parent=g4817;Name=g4817.t1 NODE_198_length_32083_cov_41.9933 . exon 9155 9220 . + . ID=g4817.t1.exon1;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . CDS 9155 9220 . + 0 ID=cds.g4817.t1;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . exon 9441 9566 . + . ID=g4817.t1.exon2;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . CDS 9441 9566 . + 0 ID=cds.g4817.t1;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . exon 9907 20513 . + . ID=g4817.t1.exon3;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . CDS 9907 20499 . + 0 ID=cds.g4817.t1;Parent=g4817.t1 NODE_198_length_32083_cov_41.9933 . three_prime_UTR 20500 20513 . + . ID=g4817.t1.utr3p1;Parent=g4817.t1 #PROT g4817.t1 g4817 MTVLQEQQPWGPPPAHALAHAKSEEAAHVVLVSGDGCAWSRGERTAWLLRHLYAPVVVELGGVEDDVVRAKDAIVLGARNSGRVVRVPAAGVTTPLSEPDDIALSPGLADPLDAGMSAKEPRSQLQQAFRVKPPVVTPATRVSFVPRRSRLAFIIDLSPSACSVHARLGKVVLDEMLPALEACLRSLVLPLGECSGGAQSPRIEVVVTIAAHTPDRARPFHPLVHGAVLTEDGIEAMLHAVCREMRECESAVAAHDRDSERALGLGPPGVAAVSSSRASIEDDAHNAQRRGQHQQTHAPQPPADGGLVGLVQTGLFVLGTLPDDSPGGVVVISDCVLGSPDPLVPLDGVLSMFWRRDVTCSFVQVGPGSQGAGTAPLGFVANTDVACLIARATGGAFLSSAECVRVFKSLDIGAEGDSAVDSTSTGGDGVPRRSSGGAVQAHTHAHATPRRRRRRSNSLGDSEEKGPDSHAAAHHVRRSVSDGTASLGDAGLHGDCGMNPVQFALLVLDGSVAPTWPLLGDNDLRKWSLGRVVVGAIEGGSFAREALVASAATMNAAVAAQGGHVVPVMRRRIRELHLASPVGLAAVLRVREGFRVEGVDIAGDRVSVRLAFPWQQHARVECTLRSRWPIVDVRGGWSLASPAVAEISVVGTYGLLRQLKAAKDASGPAGARPQSQESVMGLSPGAGAEHVAALLNFVGAMQDGDHVDAHFGAFSDNPACHAVPVVVRTNGVFRQAPENLVAMGGRGLSPGHSLLLPGAGRDRPDGTAAPSPESVFGTFWSVVAALSPSMWHRHMLVARISLLAAAESAKDGGGDLFVPRPKRASAAVLSHLRQWCAFPLVVNQSFVRFLACAGGHSTRPDGFCVARVAWEGASVLTVRLGFHGAPPALRRDCLADLIEGLVAAVAEASAKAGPEASPVGAVSSKPLRELLVHPSSVAPSSVQTEGNSDRVRLGFAPMLRSFLCHRSVVWPLSGSGEATVSAAEGALVAQRLREGFIPVAHEASGGLTYALEVEFAPDGVVSASGPGGSLPAASSSRATALVQFCTHTHTSADSLADGHVRDGDVRREFSLASHLWIEPQHSMPVSRSWRLPSALSCADALLAIQAADHRIVSALFTFDNLLALSRGLSLKDDRSRRSALRSRTDIAQPDFDASLLLGASSRVVLRQPLFAPAALPMGGEGGALDTVGPAEGGISAEHKLQAHPHEQPQSALLRHDLQPPHADEGSNGILLRLAQRSLGALCDSEVHPGDAALRRLHEAIVGSRLPPGDPRWCRCFVKGLTASAVVLAVLPLQSARATDRPVDSAPPSPYLTSKGESDGLFAQDAAFEGAADEMVVYMFECDRASYLGGVLEGTGVGMADDDTLEDVPGLVSAGALKRETGRFWSSVRNAFGRNYVVGVYRSLQCGLAVSIGDFMAAMESCEEAYVELDVTSFLEAIARSEGAAAARGQAEAADDGADGGLHASITRRFAALVSRHFLPVPGNEEYFYLASARPAVSASSGVRNDMSPPKDQLVSSQGSAGHVLDILASSDGEFAGESEDDRDRPAAARDSPAAADADSDADADGDVGAPLFLRLECTVRYRQQSGSSYYNNVAVTTLPTSLRQLLQQQDGDGDSGESSGVALELPAYGRGTLDVTLRLVCLTMAPMNADDDDDFMVFADRPTVGVDDVLPGGRGSSFTDANEAAKKRTLTTEGPPMQSRRAVASTSNNVDSGSGSDSDGDSNGDSGDRKGDGVEEDWDDGGDASTDGTASSVSSSGRSESPARLERSYGSNESIAGSSDASSYGSSVGDGGAHALDPLDGLDAEHRAILDGLCSDVRWLMEDETVSAMRHARPVLEATVDRVIAHVTSTPALRPLPTASVAFPIPLKFVNEEQSRALFSREFRRMVVAGLSLEPIGSAFVAVSRVTRLGSAVGAGFGNDEGGLSGSQAWSEPASAAAPADTTARAEGVGDSDVLAAGADDPSGAWLLPFWMVLRPDPDKVQVHFHSRADRPEDTAAHAALLRGLREAVREISERVNRVLLLRELHETRTCSALLLPPPEDEIWSRDDGGAADAGETYLSNHGIARVLFRDGQFECPCVFRTHFPLHWRLRSTQALRAIAGTLNPFSVTNRPNLFVYREKSGAVFYLRVLESLCSTADPDGAPSPAILAAADDGMFPIAEEEAASVSLAPGNNGGALPQGVQGSAGAGPGLGLGSRAASASQLSFADGNRAKAGRRNVKESVMLEAYGVDCAGPEITRQLVDMLESKIAGATLTILSTVLARNVTLRLTAEDQEFLRKPDEVPAREGTYALPSWASPATFFHFFRQNMLQFTNALLLSDAPSGGAENEAEDAAARPAGTAPIARGDMGFLFNCLVGSAAAGPIGQGMACIDVAPLYRGRPVWHAPLNRGPACGGDGTDVTKAHSANKCAVEIVDDAAAAGIEWTFRVSVFTRGSVVSEALLERIALAGTHAVCEMAIEARLLSLPLTTPAPADDALLGTERLNPALAADLCLLDRASDCDTPSMSRAEYTATLPRWALPAIIAELTEVVSESMPTLACLLFREARDAASSPGGVTTHVVCGVHGGALDGLDNGPPSHHERPAYTIVAGSSGTWQDFGGPHSGGTHGHLHAAHDDDRLSLLSASESISATTELARHMLHEETTVQVAGTGPVVIARRCLVTITVLRDRIVLRSYNLVAQSREFLDVSVSRIIAWQSQRSSLLGTLFLQKMGLSSHAMQTAHPQTRGGTGGALGVTRGLVAMEETAEGDRQGMSADALDALLSSALPPRARLVAVGNQALGAGSRDQAPVSSSPSSKAQSAGHASPQHLGRWPAGLARRPSLTHASPQGKLGMASSGSLQGGAQPLAVQVQQAQLQQTQAHANQGRRGPQSRRRRELDLAAFESILREPLPPHLYASTAAGQFDHTDPVRRHGEQLQRIAAHVVRVTERSASLRSVHSRWSGGGRDRDKERARLAPGAPVDDARSGGVSSVPRGPISMGTVKRSSRLVHYCRRPLLFLPSAAQGSAPLLRARTDAANVTATATGAPPAAPSSGSASAPTAAPAPGGKLAPATDDAAADEAFANRITAAFVQQYLAYLETLGFAVVPVAQADQLSASVGAGGSAGLLPQVRGAKRYAQRCFGGGVVLAEVYFRERYACANLYAFDASSQAGGGAHSVGPVLGDHSRRFARECAKFKDLLHLNSFAYDFHLRNIETYLVEPSSPFPRMDLRAFLDEFFADFPVTATFARNRIRRGAVAFEWDAPPSTATAGGGAHSGMDGFISYMINRASHYGFHSLRHRAVSNAVFVTSRRPDFAPRIASARDGSGAAPQSGERDVGSSAAGAGSTAGDYEYCLVACAPLREEPKDASAAASQLQRAHSLPTHQTLTLQYHVIVTDKRNPYPVAVLHAGGPSSAPPASFMQLPRGASRSAGGDVFVLPPLDDIVRNAEGRLAAMVQEAKVHFHREHLWGRLFAGSPGAGNAGVSAADFDTLMRLVHRWPVQDIDPSLGVIHSLAIPWDAALSFIAERHTDTVREIATDSERHVLIFNPNHGDMMVHLRLVKASKFARIDAVRRELVALSASGDDPNLAVEREHVGAIINTLCASLWSSLARPAIPAE* # ORIGINAL: g11859.t1 original gene structure, not modified by PASA NODE_3497_length_3328_cov_36.2854 AUGUSTUS gene 1312 2124 . + . ID=g11859;Name=g11859.t1 NODE_3497_length_3328_cov_36.2854 AUGUSTUS mRNA 1312 2124 . + . ID=g11859.t1;Parent=g11859;Name=g11859.t1 NODE_3497_length_3328_cov_36.2854 AUGUSTUS exon 1312 2124 . + . ID=g11859.t1.exon1;Parent=g11859.t1 NODE_3497_length_3328_cov_36.2854 AUGUSTUS CDS 1312 2124 . + 0 ID=cds.g11859.t1;Parent=g11859.t1 #PROT g11859.t1 g11859 MNADEDFVAVAKKERRSPKAAAEFKLYTHALASNDWSQGTYSLEGVISSCDGHFPDAIMTKMQPHRTQSTEAVIENSGVCDTRCEWLLHATRTNDSRVWENANYDKRHYVVKPAEGCNVLSAALRVLQRSMDPATSWEYRCLIGMSVSSDNPVIRIYVNDYSLWRTFPKALIPGGVVLKGAGAERRIRAKISDTPNEKASAVVTVAGEECCAEKDLTTTASDILNKESKSVVSTSVQSVQQAVAPPVIRNSWSVRPVIVLSVRELRGTMD* # PASA_UPDATE: g11860.t1, single gene model update, valid-1, status:[pasa:asmbl_6133,status:12], valid-1 NODE_3497_length_3328_cov_36.2854 . gene 2353 3007 . - . ID=g11860;Name=g11860.t1 NODE_3497_length_3328_cov_36.2854 . mRNA 2353 3007 . - . ID=g11860.t1;Parent=g11860;Name=g11860.t1 NODE_3497_length_3328_cov_36.2854 . five_prime_UTR 2963 3007 . - . ID=g11860.t1.utr5p1;Parent=g11860.t1 NODE_3497_length_3328_cov_36.2854 . exon 2353 3007 . - . ID=g11860.t1.exon1;Parent=g11860.t1 NODE_3497_length_3328_cov_36.2854 . CDS 2516 2962 . - 0 ID=cds.g11860.t1;Parent=g11860.t1 NODE_3497_length_3328_cov_36.2854 . three_prime_UTR 2353 2515 . - . ID=g11860.t1.utr3p1;Parent=g11860.t1 #PROT g11860.t1 g11860 MASVVEELEREIASLRARLAKHEAGLPTQPIYVPASKEYDDIDGHLKEKPLRADRATSLVFFPAGTVEPLHHHTNGDEMFVLEGTIEVYNQTTGETHRLGPHDYLYIPGGQPHRVTYVTDVRFFYANDGEFDGPLWDSDETATIYPAK* # ORIGINAL: g12862.t1 original gene structure, not modified by PASA NODE_2563_length_5862_cov_30.2884 AUGUSTUS gene 173 2284 . + . ID=g12862;Name=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS mRNA 173 2284 . + . ID=g12862.t1;Parent=g12862;Name=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 173 300 . + . ID=g12862.t1.exon1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 173 300 . + 2 ID=cds.g12862.t1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 509 551 . + . ID=g12862.t1.exon2;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 509 551 . + 0 ID=cds.g12862.t1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 857 933 . + . ID=g12862.t1.exon3;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 857 933 . + 2 ID=cds.g12862.t1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 1092 1152 . + . ID=g12862.t1.exon4;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 1092 1152 . + 0 ID=cds.g12862.t1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 1462 1564 . + . ID=g12862.t1.exon5;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 1462 1564 . + 2 ID=cds.g12862.t1;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS exon 2083 2284 . + . ID=g12862.t1.exon6;Parent=g12862.t1 NODE_2563_length_5862_cov_30.2884 AUGUSTUS CDS 2083 2284 . + 1 ID=cds.g12862.t1;Parent=g12862.t1 #PROT g12862.t1 g12862 SLMDLFTRDDLVLDWKLRLDLALDGAKGMAYIHSSSLLHLDLKSPNLLVDDRMRLKVADFGLATLKSVTSEKKSACGTLLWMAPELMTQPPTVTEKADVYSFGIIMHEILVFAPPYTEEVRSKGDEEDFMVSVISGARPEPVPQGCSPYTGLMKRCWAADAAKRPTFEDISERISSFIAVKHMWDDPLHAIACGNVDADPFVL* # PASA_UPDATE: g12144.t1, single gene model update, valid-1, status:[pasa:asmbl_1777,status:12], valid-1 NODE_1499_length_10915_cov_42.8543 . gene 1134 3713 . - . ID=g12144;Name=g12144.t1 NODE_1499_length_10915_cov_42.8543 . mRNA 1134 3713 . - . ID=g12144.t1;Parent=g12144;Name=g12144.t1 NODE_1499_length_10915_cov_42.8543 . five_prime_UTR 3651 3713 . - . ID=g12144.t1.utr5p1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 3570 3713 . - . ID=g12144.t1.exon1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 3570 3650 . - 0 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 3111 3183 . - . ID=g12144.t1.exon2;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 3111 3183 . - 0 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 2777 2954 . - . ID=g12144.t1.exon3;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 2777 2954 . - 2 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 2510 2597 . - . ID=g12144.t1.exon4;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 2510 2597 . - 1 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 2095 2233 . - . ID=g12144.t1.exon5;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 2095 2233 . - 0 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 1884 1978 . - . ID=g12144.t1.exon6;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 1884 1978 . - 2 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 1614 1691 . - . ID=g12144.t1.exon7;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 1614 1691 . - 0 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . exon 1134 1376 . - . ID=g12144.t1.exon8;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . CDS 1305 1376 . - 0 ID=cds.g12144.t1;Parent=g12144.t1 NODE_1499_length_10915_cov_42.8543 . three_prime_UTR 1134 1304 . - . ID=g12144.t1.utr3p1;Parent=g12144.t1 #PROT g12144.t1 g12144 MHSNVVLSMALVVALALVGADAHARWKCPEARDKNDAEGNHIVFNNTGNKYGPCGPFSGKWGMGAVTTIKPGWNTFEWEESVSHAGAPFQISILDENEVSRVVLLDHIPHWDAAAPNPADETTYVPYRITAFVPDIDCAKCSIRVLYLMTDKTVKCGTPTCTYYPEDNACSGQLDPAQPTCTGAPNDTPCKVANTCFSNYHTCTDVKITGRRPIHDVKFPQPYNWPFRHQPVGSNYSSEAGTWKDGWLQGVPADFTTKATDFCVSNN* # ORIGINAL: g12145.t1 original gene structure, not modified by PASA NODE_1499_length_10915_cov_42.8543 AUGUSTUS gene 4697 10915 . - . ID=g12145;Name=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS mRNA 4697 10915 . - . ID=g12145.t1;Parent=g12145;Name=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 9026 10915 . - . ID=g12145.t1.exon1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 9026 10915 . - 1 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 8482 8575 . - . ID=g12145.t1.exon2;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 8482 8575 . - 1 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 7590 7698 . - . ID=g12145.t1.exon3;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 7590 7698 . - 0 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 6688 6912 . - . ID=g12145.t1.exon4;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 6688 6912 . - 2 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 6378 6457 . - . ID=g12145.t1.exon5;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 6378 6457 . - 2 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 5722 5799 . - . ID=g12145.t1.exon6;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 5722 5799 . - 0 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 5375 5392 . - . ID=g12145.t1.exon7;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 5375 5392 . - 0 ID=cds.g12145.t1;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 4697 5218 . - . ID=g12145.t1.exon8;Parent=g12145.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 4697 5218 . - 0 ID=cds.g12145.t1;Parent=g12145.t1 #PROT g12145.t1 g12145 LHLLYSSIANNSASLGGVSLVDDASYLELGSTSVRNCSSNSSAGAVYAAIQAVVDIRSCDDLGENYALENGGFLCAINDAKATIYDSSIYDCSAGQSGGAISVSGNARFTVRNSKFTMNSAGYDGGAVTCTGMARLTMENTNFSMNHADYEGGVAQFMGRAVGDFQNCNLTNNTADSGGAVSVKESSNFTMFGGAGADNYADSDGGCFHVRDSAHVNIINVTLSRNEASNGGGALALEDVSSVTAEQCEFRENIATMGGAIYAKGPLSGDTFSLFIISLVCNDNFASDWGYESGDGGCIYLWNGRTRLTGQSTMSWNSAIGNGGAVYAFELALTKSDSSLTSSLAIESAVLSNNQAGLDGGAIFISDRAPSSRLVLDQSVQCVDNYAGHSGGGLYFEMGFAAMRGFTLTAIDSASGNEALFGGDVSGTAETLSILPEFPPSAASLYFPGVPLPKMKIVVSDQFNNTADVPTEQATITARIERVFPTQGSADPTTTEPVRTVRLVGGDARLLVDGMALFDTLEVRGDSPGVYALVFHADEIALNVSRLFTLGSCDGRERVIVGGEADVVCPSVAASVFASHGLSSGAITAIVAVVVTVTMVLCGVVGFRWWFRAQSRKNAAVFFEKNIATRTDLTSLAIERDSIELLETLGSGEFGIVCRGRREGSTDKERFAFIEEADIMKNLHHMNVISLVGICAKVVVELAHHGNLRSFVQQLPPRSHGSEDIVAQFVQFASDIVDGMAFLADQRITHRDLAARNCMVGQDSEGNYVVKVADFGLSRKTAGGEYQAKNKAQRMPVRWLAPESMQKAIYNEWSDVWAFGVTLFEVYSYGEVPYAGISAANVRRHVIAGNHPHQPPHCPDAIYSLMCDCWKQLPSSRPTFRTLSTRLRQLNRLSSAIGESTPARRPSSMPQANYATKRLSVSPVAHDHSFGIQRRDRSNNHYQEYSSSVTDIPLLEIAENPGIEEPVGDGNNHTMPAGDTGYVSLVVGNVDSSPSARPVADASI* # ORIGINAL: g12143.t1 original gene structure, not modified by PASA NODE_1499_length_10915_cov_42.8543 AUGUSTUS gene 105 783 . + . ID=g12143;Name=g12143.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS mRNA 105 783 . + . ID=g12143.t1;Parent=g12143;Name=g12143.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 105 176 . + . ID=g12143.t1.exon1;Parent=g12143.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 105 176 . + 0 ID=cds.g12143.t1;Parent=g12143.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS exon 607 783 . + . ID=g12143.t1.exon2;Parent=g12143.t1 NODE_1499_length_10915_cov_42.8543 AUGUSTUS CDS 607 783 . + 0 ID=cds.g12143.t1;Parent=g12143.t1 #PROT g12143.t1 g12143 VFVETLDKCFENVCELDLIFHVDKIHHILDEVVMGGMVLETNMGEILSAIDQQNKIEKSEGNIFAAAAANKKAPAMMGRTSM* # PASA_UPDATE: g8398.t1, single gene model update, valid-1, status:[pasa:asmbl_7169,status:12], valid-1 NODE_4274_length_1898_cov_38.1487 . gene 49 1780 . - . ID=g8398;Name=g8398.t1 NODE_4274_length_1898_cov_38.1487 . mRNA 49 1780 . - . ID=g8398.t1;Parent=g8398;Name=g8398.t1 NODE_4274_length_1898_cov_38.1487 . exon 1634 1780 . - . ID=g8398.t1.exon1;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . CDS 1634 1780 . - 0 ID=cds.g8398.t1;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . exon 745 1431 . - . ID=g8398.t1.exon2;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . CDS 745 1431 . - 0 ID=cds.g8398.t1;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . exon 398 547 . - . ID=g8398.t1.exon3;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . CDS 398 547 . - 0 ID=cds.g8398.t1;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . exon 49 222 . - . ID=g8398.t1.exon4;Parent=g8398.t1 NODE_4274_length_1898_cov_38.1487 . CDS 49 222 . - 0 ID=cds.g8398.t1;Parent=g8398.t1;3_prime_partial=true #PROT g8398.t1 g8398 MVVKGRAAVDPASELEDMYHVLEEGKDIYSATLGLVDVAKGINSFYKIQVLQHDARNEYRVFRSWGRVGTHIGGSKVESMGGKDPSVSHFRALFQEKTGLQWEERSSGRKIPGKFYPIEIAYDDGAGGPSVHSSALLGSRSKLHPAVQGLIRAFFDINAIKRAMLEFEIDLQKMPLGKLSAAQIRSAYSVLAELQSHLGIDVNAASDVPIDLTVPGRRTRIIDATNRFYTLIPHEFKSGVQIPLIDSRERLQDKTRMLDSLSEIEVAAKMLEVKAETEEEDPLDVHYRQLDTDISVIDRDSDLFKMIHKYVKNTHAKTHNQYSLEIEEAFHVKRAGEAERFEKSKSLGNRQLLWHGSRVTNHAGILRTGLRIAPPEAPSASTCVCV # ORIGINAL: g1878.t1 original gene structure, not modified by PASA NODE_2477_length_6122_cov_30.4281 AUGUSTUS gene 70 3637 . - . ID=g1878;Name=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS mRNA 70 3637 . - . ID=g1878.t1;Parent=g1878;Name=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 3539 3637 . - . ID=g1878.t1.exon1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 3539 3637 . - 0 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 2905 3367 . - . ID=g1878.t1.exon2;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 2905 3367 . - 0 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 2300 2486 . - . ID=g1878.t1.exon3;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 2300 2486 . - 2 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 1711 1918 . - . ID=g1878.t1.exon4;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 1711 1918 . - 1 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 1290 1390 . - . ID=g1878.t1.exon5;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 1290 1390 . - 0 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 809 880 . - . ID=g1878.t1.exon6;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 809 880 . - 1 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 579 637 . - . ID=g1878.t1.exon7;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 579 637 . - 1 ID=cds.g1878.t1;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS exon 70 137 . - . ID=g1878.t1.exon8;Parent=g1878.t1 NODE_2477_length_6122_cov_30.4281 AUGUSTUS CDS 70 137 . - 2 ID=cds.g1878.t1;Parent=g1878.t1 #PROT g1878.t1 g1878 MELERAGVPAFMQSMAMKIATSVQLDTSEAFAQGTCNDTASGDGLCTRCYDGYSGRVCDVSTGASAPVPAGSAGGGGVPIAAVGGAIGGCVALLGSAFVIFHYRGHILKAFESRGSMSSRAGNGSRDVLARSGDLDVEDASYMRGQALTEFKLGDGGFSMGAAKTNEDGLKGHDMYATIDALTGNVIEEISRDRIRLGDNIGSGNFGDVWRGTLDTASAGVVTTAVKSLKGDASAEQNKLFIMEAKVMAELNHPNIVRILGIVTIGKPVLIVLEFMSNGSLLSYLVAKKDDLSRKSLMHMCRDIAAGMVEFERRGLVHRDLAARNILVANDGTCKIADFGLARHVESDYYISTSSQKIPVKWTAPESIKFRKFSSHSDVWAFGVVCWEIFALGDKPYGQMSNAEALEMLDKGQRLARPE # PASA_UPDATE: g4548.t1, single gene model update, valid-1, status:[pasa:asmbl_3110,status:12], valid-1 NODE_195_length_32542_cov_42.2495 . gene 10546 15200 . + . ID=g4548;Name=g4548.t1 NODE_195_length_32542_cov_42.2495 . mRNA 10546 15200 . + . ID=g4548.t1;Parent=g4548;Name=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 10546 10670 . + . ID=g4548.t1.exon1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 10546 10670 . + 0 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 11073 11722 . + . ID=g4548.t1.exon2;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 11073 11722 . + 1 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 11824 12169 . + . ID=g4548.t1.exon3;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 11824 12169 . + 2 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 12300 13109 . + . ID=g4548.t1.exon4;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 12300 13109 . + 1 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 13225 13342 . + . ID=g4548.t1.exon5;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 13225 13342 . + 1 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 13476 14757 . + . ID=g4548.t1.exon6;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . CDS 13476 14588 . + 0 ID=cds.g4548.t1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . exon 15007 15200 . + . ID=g4548.t1.exon7;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 14589 14757 . + . ID=g4548.t1.utr3p1;Parent=g4548.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 15007 15200 . + . ID=g4548.t1.utr3p2;Parent=g4548.t1 #PROT g4548.t1 g4548 MAYQYEYAQPYHEHDDPYRATGMAGPAQFDPAGYASVNASYRHSGYGGHVRYAHAQAGAADGAVYQYGVSRYAPYPPHPRWPPSRAHEPDIRGLPRRMDPYEAEVYMRATTAAPALSRHPGVQSNVHAAANGYHPPECLCQNCARQYWDVHPDSRRSMSYASAQSIGPAMVRAMPYAAPAARHGGPYPYSGASGRLGYRPLPYPDDPRYAGTGFAVSTAPATYEESPYVGYVGPARAPASFHRDSVPYPSLALRRYSEDAAYGSYGPGRASMTGITRGSHSRPFLENRGERPIIDSRRKSETSPQAAPARNDNEGYENEHHGELYPSEVIDSSKDVSETLEVVGETGRTRRYQFVPNPDPLVKGDTAYRCANRRCLRTFHKMTAFERHTCLGTQESPDECEVRCEYPGCSRTFPSQLRMHMHQRVHRQNLAGDDHPLSPPSGRVSPSMVGCGEDPKEEVSDAPVGSASHKLKTPLPCPMPRCSYSARKVIDMTEHIMTTHAPVSKTTCPFLPCECIFQGPWLRGRMQMHVIAHCYELVQKSAAESGGDGQDDQDVSADISMPRDEPNSVPNSRRSAGDNHAASTLQRLTKQEKNARDKLGEAREVFPCQWASCTDLFAEQSLLSAHVWTHVAALPLEDDLLSCMWRGCDHLSPTFEKLVSHCESHLTASTMVVYSCVHLACGKLFGTRHEVTVHVQSSHGMRAPVEPQPTRPESCPPAPCPLPPPRRRGVAYNPSLTDSQFDALAAELVGTLHCSDAETEPTREPLKCSTPQPETRRPPKYVAVRKSPKVVPPRINVISVDDNESSDYAPSESDGKRRPKWVRGPWGTWNDKKRRNGLQNKLPPSKRRGPAKYHRRDVDNGTEPDANDNAEGEDGECAGAHSDTRSKGRRLVLFSEDPNVAPVEVFLRASSDEGSKKQTARVHKKGRAAPHGRRRGNTHTHNKSATVSSDDECALASQWVRPESRRRKPATGKVHRWGRTSSMQPLSVEADADASDCDISDGCPVMPVRIVDHSRSEMDPVCAVCVKPSTRRDLPQSPSEEAGYRARDRGAAR* # ORIGINAL: g4555.t1 original gene structure, not modified by PASA NODE_195_length_32542_cov_42.2495 AUGUSTUS gene 27191 32446 . + . ID=g4555;Name=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS mRNA 27191 32446 . + . ID=g4555.t1;Parent=g4555;Name=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 27191 27295 . + . ID=g4555.t1.exon1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 27191 27295 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 27478 27582 . + . ID=g4555.t1.exon2;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 27478 27582 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 27931 28041 . + . ID=g4555.t1.exon3;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 27931 28041 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 28225 28291 . + . ID=g4555.t1.exon4;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 28225 28291 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 28538 28613 . + . ID=g4555.t1.exon5;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 28538 28613 . + 2 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 28789 28990 . + . ID=g4555.t1.exon6;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 28789 28990 . + 1 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 29332 29680 . + . ID=g4555.t1.exon7;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 29332 29680 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 29877 30241 . + . ID=g4555.t1.exon8;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 29877 30241 . + 2 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 30456 30617 . + . ID=g4555.t1.exon9;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 30456 30617 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 30949 31926 . + . ID=g4555.t1.exon10;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 30949 31926 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 32162 32446 . + . ID=g4555.t1.exon11;Parent=g4555.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 32162 32446 . + 0 ID=cds.g4555.t1;Parent=g4555.t1 #PROT g4555.t1 g4555 MAYNYVVTAQKPTAVTHVATGNFTAPDHLNLILGKSTRVEIHHMTPEGLRPMLDIGVYGRIAVMELYRPPASNMDYLFISTERYRFCVLAFDQQTGEIVTKAGGDVSDKTGRPSDNGQIGIVDPEGRMIGMRLYDGLFKVIPIVNGQFKDAFNIRLEELQVLDIKFLYGCAKPTIVVLYEDAKNMLHVKTYEVLVREKEFGDGPWEQRNVEGGSTMLIPVPKPFGGVLIIGEQTVTYHNGERFKSIAMRTTFMRCFGRVDSNGSRFLLGDLAGNLHMLLLVNDGERGTELRMELLGETSSASCLAYLDNGVVFVGSVFGDSQLVKLVPEKDENGSFIEVLETYSNLGPIVDLCVVDLDRQGQGQVVTCSGVGKDGSLRIIRNGIGINEQATVELPGIKGVWALRRDPASRADSLLAVSFVGETRFLSMAGFELEETEIAGFEASKQTLFCGNVAGGQFVQITEAGVRLVSAESLAVTAQWTPPEGTRVNVASCNGRQILLATGGGHVVHIEIGESALVETGHAQMEHEVACVDISALDASGVASVCAVGLWTDISVRVLRAPSLQPLAVEVLGGDIIPRSVLLATFEGVAYLLCALGDGSLVTFVLDPVTCALSERKKVLLGTQPLVLTAFYTGASRHVFACSDRPSVIYSSNRKLLFSNVNLREVAYVCPFNSENFPDSLALATDGALTIGTIDEIQKLHIRTVPLGETPRRIAHQDATRTFVVATMRSAVDADAREYNVCFARLIDDQTFETLHAFQLDEREEPGAVLSMTFTGDPTPYYVVGTAYVLPTDDEPKKGRLIVLRVADGRLVKVAEKEVRGACYTLNAFNGKALASVNSKVTVYRWVDLEDGTKELQSECGHHGHILAIIVKTRGEFIAVGDLMNSISLCVYKPLGGTIEEIARCDGVLLVVCYLVCDVFVWRYIAFALNDTFK* # ORIGINAL: g4552.t1 original gene structure, not modified by PASA NODE_195_length_32542_cov_42.2495 AUGUSTUS gene 22572 23331 . - . ID=g4552;Name=g4552.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS mRNA 22572 23331 . - . ID=g4552.t1;Parent=g4552;Name=g4552.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 22931 23331 . - . ID=g4552.t1.exon1;Parent=g4552.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 22931 23331 . - 0 ID=cds.g4552.t1;Parent=g4552.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 22572 22776 . - . ID=g4552.t1.exon2;Parent=g4552.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 22572 22776 . - 1 ID=cds.g4552.t1;Parent=g4552.t1 #PROT g4552.t1 g4552 MASHLSEVLFEDALAFLTSTRGGGPPGRFLFKHFKASAGEWRVFTAMPYPEEITLALEMPSDMNIRSLHTAPSKFWPEHGTKLKRYWNSLPVEQRNAMLACVTFRDNYNGVTWRNYLPELLSDTRVKPCEHPESFLSIMEHYGTTSLDVLRRESKAFVKRVRVNLPVVEPAIIKYSWVINIGMFPLKGIASKTNKNAFAIS* # ORIGINAL: g4546.t1 original gene structure, not modified by PASA NODE_195_length_32542_cov_42.2495 AUGUSTUS gene 461 1588 . + . ID=g4546;Name=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS mRNA 461 1588 . + . ID=g4546.t1;Parent=g4546;Name=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 461 606 . + . ID=g4546.t1.exon1;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 461 606 . + 2 ID=cds.g4546.t1;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 727 832 . + . ID=g4546.t1.exon2;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 727 832 . + 0 ID=cds.g4546.t1;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 961 1102 . + . ID=g4546.t1.exon3;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 961 1102 . + 2 ID=cds.g4546.t1;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 1221 1365 . + . ID=g4546.t1.exon4;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 1221 1365 . + 1 ID=cds.g4546.t1;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 1478 1588 . + . ID=g4546.t1.exon5;Parent=g4546.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 1478 1588 . + 0 ID=cds.g4546.t1;Parent=g4546.t1 #PROT g4546.t1 g4546 IEKWVVFGGSWGSTLALAYAETHPDRVKALILRGIFALRRKELVWFYQEGASFIFPDAWDEYLKPIPVVERGDLMSAYHRRLTGSNEEEQQRCAKAWSTWECTTSKLFPDAEMISKAANDTWALAFARIECHYFVNGGFFENDNHLIENVGKIRNIPAVIVQGRYDLVCPMVTAWELHKAWPEAEFIVVPDAGHSAKETGTTSQLIAAADKFKTL* # PASA_UPDATE: g4551.t1, single gene model update, valid-1, status:[pasa:asmbl_3108,status:3], valid-1 NODE_195_length_32542_cov_42.2495 . gene 19870 21789 . - . ID=g4551;Name=g4551.t1 NODE_195_length_32542_cov_42.2495 . mRNA 19870 21789 . - . ID=g4551.t1;Parent=g4551;Name=g4551.t1 NODE_195_length_32542_cov_42.2495 . five_prime_UTR 21726 21789 . - . ID=g4551.t1.utr5p1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . exon 21625 21789 . - . ID=g4551.t1.exon1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . CDS 21625 21725 . - 0 ID=cds.g4551.t1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . exon 21124 21331 . - . ID=g4551.t1.exon2;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . CDS 21124 21331 . - 1 ID=cds.g4551.t1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . exon 20824 20973 . - . ID=g4551.t1.exon3;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . CDS 20824 20973 . - 0 ID=cds.g4551.t1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . exon 19870 20561 . - . ID=g4551.t1.exon4;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . CDS 20049 20561 . - 0 ID=cds.g4551.t1;Parent=g4551.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 19870 20048 . - . ID=g4551.t1.utr3p1;Parent=g4551.t1 #PROT g4551.t1 g4551 MSTVTHRKPGAASGGASSAPLKATPRAENTPSSGIGAWVTFFNERVPIVVYALLACGPVFSAMTLCEKEFDLATFLWTAPAQLLFLITIRFMDDVKDFDKDCEVHPDRPLPRGLLKVSEVTNAVRYLLASLFAFAFVLAYNFTARQGFTFAFQVVYLYLMYIEFGCGEWLEERPLFYAVTHQVAIYPGAVHLLGMISPAVLEEPRSYFLGSLALSGFFTFEVCRKLDPFVSPKKGTYLIVYGSLKTFLITLVTVAIGYVSASQLGVAEFLHPIQYGLIGSLALLLLLPKGTQKKVYKIVEALSIFYLLCHLWGLWLTKWWAGK* # PASA_UPDATE: g4550.t1, single gene model update, valid-1, status:[pasa:asmbl_3112,status:3], valid-1 NODE_195_length_32542_cov_42.2495 . gene 17414 19361 . + . ID=g4550;Name=g4550.t1 NODE_195_length_32542_cov_42.2495 . mRNA 17414 19361 . + . ID=g4550.t1;Parent=g4550;Name=g4550.t1 NODE_195_length_32542_cov_42.2495 . five_prime_UTR 17414 17733 . + . ID=g4550.t1.utr5p1;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . exon 17414 18114 . + . ID=g4550.t1.exon1;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . CDS 17734 18114 . + 0 ID=cds.g4550.t1;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . exon 18398 18495 . + . ID=g4550.t1.exon2;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . CDS 18398 18495 . + 0 ID=cds.g4550.t1;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . exon 18843 19361 . + . ID=g4550.t1.exon3;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . CDS 18843 19002 . + 1 ID=cds.g4550.t1;Parent=g4550.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 19003 19361 . + . ID=g4550.t1.utr3p1;Parent=g4550.t1 #PROT g4550.t1 g4550 MAADVVYGFAVWLQALPGWQGPLVIILLFIGVSFPMTWGYIVLNLGAGYLYGFQTGLATVVAGACLGSFVSFQASRYMCKDYVRTKLEGHPSLKSLVRVVEGPQGFRIIMLARLTPIPFGLQNALFSLAKIEPAIYTAATVVGLLPTQIVNTYIGTTLHTVEDVIEGKSDMKAGSYAILLLQIVLGIALSYYVVRRAQQELNGATGEPVSDV* # ORIGINAL: g4553.t1 original gene structure, not modified by PASA NODE_195_length_32542_cov_42.2495 AUGUSTUS gene 24162 24818 . + . ID=g4553;Name=g4553.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS mRNA 24162 24818 . + . ID=g4553.t1;Parent=g4553;Name=g4553.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 24162 24818 . + . ID=g4553.t1.exon1;Parent=g4553.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 24162 24818 . + 0 ID=cds.g4553.t1;Parent=g4553.t1 #PROT g4553.t1 g4553 MAPIPTPTNWQPLPSATGVPVEADSDPIPVAAILILAIVAWIVFLGLIYLVRLLVVAKNVKCTCSGASKLWDLICCECCPTFEACAQTCEACRPKCNLPDIRDLLCPDCHRCQDCLEDCQMPAWMTACCPTCSGGCRRRILACWGSFYKWLITPTDCSKLCDFKSCCTGCGNCCTNCCECCTCPSCKCPEVSCPNCACQCKLPQCDVINCICFEVRCK* # PASA_UPDATE: g4549.t1, single gene model update, valid-1, status:[pasa:asmbl_3111,status:3], valid-1 NODE_195_length_32542_cov_42.2495 . gene 15941 16976 . + . ID=g4549;Name=g4549.t1 NODE_195_length_32542_cov_42.2495 . mRNA 15941 16976 . + . ID=g4549.t1;Parent=g4549;Name=g4549.t1 NODE_195_length_32542_cov_42.2495 . five_prime_UTR 15941 16039 . + . ID=g4549.t1.utr5p1;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . exon 15941 16173 . + . ID=g4549.t1.exon1;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . CDS 16040 16173 . + 0 ID=cds.g4549.t1;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . exon 16611 16720 . + . ID=g4549.t1.exon2;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . CDS 16611 16720 . + 1 ID=cds.g4549.t1;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . exon 16821 16976 . + . ID=g4549.t1.exon3;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . CDS 16821 16936 . + 2 ID=cds.g4549.t1;Parent=g4549.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 16937 16976 . + . ID=g4549.t1.utr3p1;Parent=g4549.t1 #PROT g4549.t1 g4549 MFGAGRKITARTLEYLRRNPIQLNDKIHTIQVVFSKMAPDHLGTRLFLFTKVPPIKYHNPNVVVRVNKSPTNEKAAVHLVLANGQVCDIYTKDKRPEAILDDVLSAAGLGRDVVKRMNE* # ORIGINAL: g4547.t1 original gene structure, not modified by PASA NODE_195_length_32542_cov_42.2495 AUGUSTUS gene 1729 4593 . - . ID=g4547;Name=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS mRNA 1729 4593 . - . ID=g4547.t1;Parent=g4547;Name=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 4528 4593 . - . ID=g4547.t1.exon1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 4528 4593 . - 0 ID=cds.g4547.t1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 4077 4194 . - . ID=g4547.t1.exon2;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 4077 4194 . - 0 ID=cds.g4547.t1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 3600 3676 . - . ID=g4547.t1.exon3;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 3600 3676 . - 2 ID=cds.g4547.t1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 3314 3393 . - . ID=g4547.t1.exon4;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 3314 3393 . - 0 ID=cds.g4547.t1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 2508 2655 . - . ID=g4547.t1.exon5;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 2508 2655 . - 1 ID=cds.g4547.t1;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS exon 1729 2424 . - . ID=g4547.t1.exon6;Parent=g4547.t1 NODE_195_length_32542_cov_42.2495 AUGUSTUS CDS 1729 2424 . - 0 ID=cds.g4547.t1;Parent=g4547.t1 #PROT g4547.t1 g4547 MNDARSAAVEVSEIDQLVINAQAEPVRIPEGVQRFQFRLRVPDGVPTSLKLANACIQYELIAIAVVESKYGFFEGRTKERRAVVPIEVQSSGADPAVISNLQNQVFANTRKDFSYACTERLLKQRLEQVIRPKTSAFMTLYVPCTTPAGTVSCHARLVHVRYTVCVRLGVAWAKDVKVAVPVEVVDPPAIPLRAIPVMPSAPPVTSGMVSGMSAQQSSAFSSSGDTGYNPAHLGLNHFHGSTTVQRGIGGLVGAPIPPPTFKATPLIPGVDTSTAYPLSLLDELQQRQQTTPAKPTRGSGADKSQARPDVPPRPTQAGAGCEASGQYTSTAAGVSAQRPPVAPRRVYPDIRAVEHEHRHMQYEEVEDTARRPAIPPRPYPAERSASPPPRYTEY* # PASA_UPDATE: g4554.t1, single gene model update, valid-1, status:[pasa:asmbl_3109,status:3], valid-1 NODE_195_length_32542_cov_42.2495 . gene 25167 26548 . - . ID=g4554;Name=g4554.t1 NODE_195_length_32542_cov_42.2495 . mRNA 25167 26548 . - . ID=g4554.t1;Parent=g4554;Name=g4554.t1 NODE_195_length_32542_cov_42.2495 . five_prime_UTR 26490 26548 . - . ID=g4554.t1.utr5p1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . exon 26370 26548 . - . ID=g4554.t1.exon1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . CDS 26370 26489 . - 0 ID=cds.g4554.t1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . exon 25959 26183 . - . ID=g4554.t1.exon2;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . CDS 25959 26183 . - 0 ID=cds.g4554.t1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . exon 25517 25789 . - . ID=g4554.t1.exon3;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . CDS 25517 25789 . - 0 ID=cds.g4554.t1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . exon 25167 25308 . - . ID=g4554.t1.exon4;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . CDS 25210 25308 . - 0 ID=cds.g4554.t1;Parent=g4554.t1 NODE_195_length_32542_cov_42.2495 . three_prime_UTR 25167 25209 . - . ID=g4554.t1.utr3p1;Parent=g4554.t1 #PROT g4554.t1 g4554 MDDELTDLPTGSSDNIVSEFATYEDYLNSQITPVDLYYLEDEELARQLVELGYRGSGEVLKREEFDARRKAAENARLSKRSQPKSLASSGRVFEGLPFLTALAEREEANRNGKMTSIIFIRDKSHRGQEISGYIDYAHRLKTEDFEPYFTRKKRLLPRPSDLSFYNWETHTCTSNSTPNFQVITDNETGLLFKNKRDRKIINVDPKELKPGDNSTRVPVETDEYIQVVIYDHITRRKT* # ORIGINAL: g8330.t1 original gene structure, not modified by PASA NODE_1710_length_9576_cov_39.953 AUGUSTUS gene 21 2735 . - . ID=g8330;Name=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS mRNA 21 2735 . - . ID=g8330.t1;Parent=g8330;Name=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 2639 2735 . - . ID=g8330.t1.exon1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 2639 2735 . - 0 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 2317 2433 . - . ID=g8330.t1.exon2;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 2317 2433 . - 2 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 1788 1874 . - . ID=g8330.t1.exon3;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 1788 1874 . - 2 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 1486 1592 . - . ID=g8330.t1.exon4;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 1486 1592 . - 2 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 924 1073 . - . ID=g8330.t1.exon5;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 924 1073 . - 0 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 646 735 . - . ID=g8330.t1.exon6;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 646 735 . - 0 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 221 428 . - . ID=g8330.t1.exon7;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 221 428 . - 0 ID=cds.g8330.t1;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 21 68 . - . ID=g8330.t1.exon8;Parent=g8330.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 21 68 . - 2 ID=cds.g8330.t1;Parent=g8330.t1 #PROT g8330.t1 g8330 MRPAVYTCALWACMLLACIIAASAAVSGVPPSLRSRYADGQPFACLDGSKRIEFSAINDDFCDCADGSDEPGTSACPNGRFYCANKHHTPELIPSSRVNDRICDCCDGSDEITTGALCPNTCYEQGAKAREEERLREELFAAGITKRSEYAEKGLESHRRRESRMSELQVEIGVAKELEERLKTEKTEAEDKARLARDVFDTEWDKTISAWRAENEKQVEQSSEGSPDPSSESDDPELPIEDALSDLGASDESETQSSDDGADDSAPVDEDASDPEGDSSNDGPREPEKPAYDEPTEALIK # ORIGINAL: g8332.t1 original gene structure, not modified by PASA NODE_1710_length_9576_cov_39.953 AUGUSTUS gene 4405 4956 . - . ID=g8332;Name=g8332.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS mRNA 4405 4956 . - . ID=g8332.t1;Parent=g8332;Name=g8332.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 4405 4956 . - . ID=g8332.t1.exon1;Parent=g8332.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 4405 4956 . - 0 ID=cds.g8332.t1;Parent=g8332.t1 #PROT g8332.t1 g8332 MQTGSVPLWPSPKEQASGEAAWARSSTPLVVVAAVEEEEEDAWESSSVREKELQMQTGSVPLWPSPKEQVAGEAAWARSSTPLVVVVAAEEEEEDAWESSSAREKELQTQTGSAPQWPSPKEQASGEAAKARCLKPLVVVAAVEEEEEDAWESSSAREKELQTQTGSVPQWPLLKGQASGEAA* # ORIGINAL: g8333.t1 original gene structure, not modified by PASA NODE_1710_length_9576_cov_39.953 AUGUSTUS gene 5097 8075 . + . ID=g8333;Name=g8333.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS mRNA 5097 8075 . + . ID=g8333.t1;Parent=g8333;Name=g8333.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 5097 8075 . + . ID=g8333.t1.exon1;Parent=g8333.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 5097 8075 . + 0 ID=cds.g8333.t1;Parent=g8333.t1 #PROT g8333.t1 g8333 MPVPSASPSSVFCPDPSTPLAIPTFFPPTIGLCSEASVVANVSTSLLNFQTVFRVAFIFQATSPSGTILSLSGATKDRIVSSLDAAGRLVVAVNYGSGDMVVTASGHYIDGSQHSVAITSSNGTFQVTVDGSIVGQSARSTSLAVDNISTLSSKFDGCLTVMQIGKSGGTLNYPITSWKGAKEQCCSCKARPQPSSAAAPSSKAAATQTAVPVATTGVKASATATATASARPATATASAGPATATASARPATATASPQAPKPSSTPAVGYPSCPSIGGATVTAPIVLPEVVGLCSSNKVTANISASLLNFQTIFTISLQFRAVTTAGHIFQTSGSTVDGIFIDLNDDGSLFGAVNYGSGYVYAIVPGPFDDGEWHTVTLRSVSGEFDLTGDGTTVKSGKSRSLAVDNLSTISSSFEGCLSIRSIQSKKWSNFNVTSMGGASDKCCSCRVDGACPSAGGPIVKSPATLPSVVGMCNDGSVTAAFAESVFRFQTTFGVRVGFKATAGGGSILAISGSSSERISLALSAAGHLIGTVNYGTGDITVRIDGPFTDGVFRNASLTSVNGLFTVWVGEKSATSTTKPQFVSLKTLNMLRIAVAGCVTVYDINKKAPSTFSVTSWDNASTSCCKCAVVEKPAVIVSCPPAAYEYTTTGTPARLPATLGLCASGKVGAVLPASTLAFRTSINIALAFKTQASSGMLLNLVSSTGPDRLWLNVENGSLALRVNFGSGVVLATLPGPYNDGVGRNVEISTFKGVATLKVGSASASSRNGTSQSLEGITILEVKIDGCVNLTKIDRAVPTTLSVSEWRAASTSCCSCVEQCKADSRPPLTIEGDFSVCQGGRVAAATPFGRRSTSSFELRYSTMYTNGNLFRVIGNFSEAISVAHVGGFVQVTADFGSGPVSARWNGTATDDGAEHTLVVRFGWGGVSVEVDPISGVTVPVFSVTGKSVALDGITTVVFETKGCFELIRFDTFAASAFKTTSFAGATAQMCTV* # ORIGINAL: g8331.t1 original gene structure, not modified by PASA NODE_1710_length_9576_cov_39.953 AUGUSTUS gene 3644 4232 . + . ID=g8331;Name=g8331.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS mRNA 3644 4232 . + . ID=g8331.t1;Parent=g8331;Name=g8331.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 3644 3894 . + . ID=g8331.t1.exon1;Parent=g8331.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 3644 3894 . + 0 ID=cds.g8331.t1;Parent=g8331.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS exon 4064 4232 . + . ID=g8331.t1.exon2;Parent=g8331.t1 NODE_1710_length_9576_cov_39.953 AUGUSTUS CDS 4064 4232 . + 1 ID=cds.g8331.t1;Parent=g8331.t1 #PROT g8331.t1 g8331 MEHSARFVYLAVLLFVSALGTTNATVENGAIDAVIAAKPTLFDPFITVVKVGSIVQWVGLSNHNVMHVIDNKTACAEAVNGGFRSGDVSAVDTFSQVFHTPGIFHFKSEVRPPPLTLYVPSGLMRTKYPSILNLLTSFK* # PASA_UPDATE: g8136.t1, single gene model update, valid-1, status:[pasa:asmbl_6317,status:12], valid-1 NODE_361_length_25970_cov_43.5278 . gene 12394 13618 . - . ID=g8136;Name=g8136.t1 NODE_361_length_25970_cov_43.5278 . mRNA 12394 13618 . - . ID=g8136.t1;Parent=g8136;Name=g8136.t1 NODE_361_length_25970_cov_43.5278 . five_prime_UTR 13520 13618 . - . ID=g8136.t1.utr5p1;Parent=g8136.t1 NODE_361_length_25970_cov_43.5278 . exon 12394 13618 . - . ID=g8136.t1.exon1;Parent=g8136.t1 NODE_361_length_25970_cov_43.5278 . CDS 12572 13519 . - 0 ID=cds.g8136.t1;Parent=g8136.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 12394 12571 . - . ID=g8136.t1.utr3p1;Parent=g8136.t1 #PROT g8136.t1 g8136 MPVDTGSSLLCRRRSPVRMQGDFESDARTSPLTNGHAGSGSPGFTTERRDVRVTNVSSSSTVCVARTRGELSPPAKRQPRELERLMYDDRIVKLSLSKLEGQRRTPSRVTAHGSPLKRLVLIHNLIADVARDRASQRQILVEMDTRLRAEALRELEKREAADKRIREDESEGADGCVIMPDGAVIELGGRAPAQGVRCAASVRAQLSGGGCNQSETSIVCWSSERSELGESAVTTSVVAAVGTAARTAVECAVSIQVVDPHKPPKGTPGKWRKHGLPAFSVGTSMDALQFAFFLLVTLEVVFITFTIMSGDNAPS* # ORIGINAL: g8140.t1 original gene structure, not modified by PASA NODE_361_length_25970_cov_43.5278 AUGUSTUS gene 23854 24564 . - . ID=g8140;Name=g8140.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS mRNA 23854 24564 . - . ID=g8140.t1;Parent=g8140;Name=g8140.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 23854 24564 . - . ID=g8140.t1.exon1;Parent=g8140.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 23854 24564 . - 0 ID=cds.g8140.t1;Parent=g8140.t1 #PROT g8140.t1 g8140 MALKWSVALFIALRRRLSPASPSPSPRAMTAIMAASLTGVGAHCGAVVFFLMAPCSDARMAATSAVSCTLAAALAYAAHTGLVPPRRGDRAQIAVLGALALAGMLCGLAATTFFIVRAMVGEDSSRATHAETDKEGRITCPPAAAGAAIATLIVVWGAALAGTVVWTEAAKGLCLPPAATDRTPLLADTAGERNMDNTNHSTEVHIHTDYLAHDGGETEGQPSLVGRNLRAAGGHQ* # ORIGINAL: g8135.t1 original gene structure, not modified by PASA NODE_361_length_25970_cov_43.5278 AUGUSTUS gene 8096 12364 . + . ID=g8135;Name=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS mRNA 8096 12364 . + . ID=g8135.t1;Parent=g8135;Name=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 8096 8444 . + . ID=g8135.t1.exon1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 8096 8444 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 8606 8766 . + . ID=g8135.t1.exon2;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 8606 8766 . + 2 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 8844 8916 . + . ID=g8135.t1.exon3;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 8844 8916 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 9086 9317 . + . ID=g8135.t1.exon4;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 9086 9317 . + 2 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 9432 9697 . + . ID=g8135.t1.exon5;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 9432 9697 . + 1 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 9916 10025 . + . ID=g8135.t1.exon6;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 9916 10025 . + 2 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 10131 10522 . + . ID=g8135.t1.exon7;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 10131 10522 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 10622 10726 . + . ID=g8135.t1.exon8;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 10622 10726 . + 1 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 10818 10881 . + . ID=g8135.t1.exon9;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 10818 10881 . + 1 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 11033 11113 . + . ID=g8135.t1.exon10;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 11033 11113 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 11230 11295 . + . ID=g8135.t1.exon11;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 11230 11295 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 11460 11570 . + . ID=g8135.t1.exon12;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 11460 11570 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 11701 11843 . + . ID=g8135.t1.exon13;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 11701 11843 . + 0 ID=cds.g8135.t1;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 11971 12364 . + . ID=g8135.t1.exon14;Parent=g8135.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 11971 12364 . + 1 ID=cds.g8135.t1;Parent=g8135.t1 #PROT g8135.t1 g8135 MHSPVGEWTAIHPWQRSGSRALSSSSERPPTGGVAGDGSVARRGDGSSRGGSGDRIVGDVADTLAAPHSAGKWDGQYFMDPLQLIDIDEAAVDERPAAARQLVSNPFRDSSLWKGKESVMADLLYRFFGDASVLRACEQSGLSTGTELYGRAQMAFRNMASGMRGKNPPGIRNDESIERPLVVAVCEAIGCTLDGDLDGGRLHDAPRLVFSYSPVHDDRSRDSAVGSAGGATAATAATILPHFLAWAHANIPEVAEHQMLRRYSDLRQPWKWYPLARQRQRKIVFHAGPTNSGKTHHALERFRAAASGVYCGPLRLLALEIFDSTNAQGVRCDLVTGEERRTAGEDGQASKHVSCTVEMAAVGESYECAVIDEIQMLADESRGWAWTRALLGLDAAEIHVCGEERAVRIVSDMCRTIGEQVEVRRYNRLTPLVVDSSTLLGRYEHVERGDCVVAFSRKAIFEARLRIERATNLKCAVIYGSLPPAARSHQARLFNEADSGYDVLVASDAIGMGLNLHIGRIIFSTISKYDGEKVTPLEHSQIKQIAGRAGRFQSRFPRGRVTTYTHDDLKPIEEALASELQHIEMAGLLPTFDQIELYAAQAPGLPLSSLLGKFRETAHVDGHFFVCDLGAQMTVADLIQPLDMPLKHRYAFCIAPVKTDDAFVMSTMLQYARAFSLRRRVRLRRLASFDSMQAPSTDEELQRLESIHRCIDLYLWLGQRYQDTFPDGEYGLQLQQRCSDLITIGLARKSERRVDRDDRRSRSSPGARGGLIQRHAREKNFNRQRYGREHNHIDADEDGEDGEDGEDDGRVETRKGRPGRPGRRPPAAQHPRWLDELLSSPSSGGRAR* # PASA_UPDATE: g8139.t1, single gene model update, valid-1, status:[pasa:asmbl_6312,status:8],[pasa:asmbl_6318,status:3], valid-1 NODE_361_length_25970_cov_43.5278 . gene 22632 23732 . + . ID=g8139;Name=g8139.t1 NODE_361_length_25970_cov_43.5278 . mRNA 22632 23732 . + . ID=g8139.t1;Parent=g8139;Name=g8139.t1 NODE_361_length_25970_cov_43.5278 . five_prime_UTR 22632 22739 . + . ID=g8139.t1.utr5p1;Parent=g8139.t1 NODE_361_length_25970_cov_43.5278 . exon 22632 23732 . + . ID=g8139.t1.exon1;Parent=g8139.t1 NODE_361_length_25970_cov_43.5278 . CDS 22740 23405 . + 0 ID=cds.g8139.t1;Parent=g8139.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 23406 23732 . + . ID=g8139.t1.utr3p1;Parent=g8139.t1 #PROT g8139.t1 g8139 MLACLSAVRAYLRMGVPSSAPLLAPHVACASHASLPPARALWTTPACRSLQPFGRVAAHGKAKRAFLAEAAGKQLVVPPAEQLWVLGMAAVYASASRCVGRALGLVNLCIFSYHYWYNRGFNFHHWLHCMYIHRPYRKDVLPFAIRRSKNNKIPVYSRISQAGGRVRTKIQNVDGDIEALRALLVRDLSVHPEDVAVHLSSVEVRGLHTVSLKKYLTRLGF* # PASA_UPDATE: g8133.t1, single gene model update, valid-1, status:[pasa:asmbl_6313,status:3], valid-1 NODE_361_length_25970_cov_43.5278 . gene 2195 3249 . - . ID=g8133;Name=g8133.t1 NODE_361_length_25970_cov_43.5278 . mRNA 2195 3249 . - . ID=g8133.t1;Parent=g8133;Name=g8133.t1 NODE_361_length_25970_cov_43.5278 . five_prime_UTR 3221 3249 . - . ID=g8133.t1.utr5p1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . exon 3177 3249 . - . ID=g8133.t1.exon1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . CDS 3177 3220 . - 0 ID=cds.g8133.t1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . exon 2911 3058 . - . ID=g8133.t1.exon2;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . CDS 2911 3058 . - 1 ID=cds.g8133.t1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . exon 2605 2704 . - . ID=g8133.t1.exon3;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . CDS 2605 2704 . - 0 ID=cds.g8133.t1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . exon 2195 2494 . - . ID=g8133.t1.exon4;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . CDS 2343 2494 . - 2 ID=cds.g8133.t1;Parent=g8133.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 2195 2342 . - . ID=g8133.t1.utr3p1;Parent=g8133.t1 #PROT g8133.t1 g8133 MAAVHEKKDPSVKERWVCIYPVYLNSTKTVPEGRRVSRERGVRDPTCNEIRDVCNSLKLECAVEPHKCYPRDFTQQGRVRVHLRNADGSPVKPQIANRKTLFAAVAFGIQKISGRAADAAAAASEQASQVSQPTAARGGKKPKKGKK* # PASA_UPDATE: g8134.t1, single gene model update, valid-1, status:[pasa:asmbl_6311,status:12], valid-1 NODE_361_length_25970_cov_43.5278 . gene 3498 7562 . + . ID=g8134;Name=g8134.t1 NODE_361_length_25970_cov_43.5278 . mRNA 3498 7562 . + . ID=g8134.t1;Parent=g8134;Name=g8134.t1 NODE_361_length_25970_cov_43.5278 . five_prime_UTR 3498 3635 . + . ID=g8134.t1.utr5p1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 3498 3775 . + . ID=g8134.t1.exon1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 3636 3775 . + 0 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 3882 3957 . + . ID=g8134.t1.exon2;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 3882 3957 . + 1 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 4065 4172 . + . ID=g8134.t1.exon3;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 4065 4172 . + 0 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 4269 4461 . + . ID=g8134.t1.exon4;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 4269 4461 . + 0 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 4588 4704 . + . ID=g8134.t1.exon5;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 4588 4704 . + 2 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 4817 4863 . + . ID=g8134.t1.exon6;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 4817 4863 . + 2 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 5012 5158 . + . ID=g8134.t1.exon7;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 5012 5158 . + 0 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 5319 5484 . + . ID=g8134.t1.exon8;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 5319 5484 . + 0 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 5601 5762 . + . ID=g8134.t1.exon9;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 5601 5762 . + 2 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 6081 6191 . + . ID=g8134.t1.exon10;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 6081 6191 . + 2 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . exon 6289 7562 . + . ID=g8134.t1.exon11;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . CDS 6289 7511 . + 2 ID=cds.g8134.t1;Parent=g8134.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 7512 7562 . + . ID=g8134.t1.utr3p1;Parent=g8134.t1 #PROT g8134.t1 g8134 MARGTVQRPAGGGNGNAFGDNARFDAYGFWIPEDGHDDEDYRCHEYTQENAGAGERVWQKIFAMWPTVSPGRLRMHTRRGVPDSIRGEYWRRLLGCDSLKEHTGFDYKANLEEIKVILSQRDARDASRRAIAVAEQMAGVLADDSVQMQTIPDPIDDESPTPPTVRQIWLDLDRTLYTHRMFKGEESRGRQSLFNVLVAYARYNPGVGYCQGMSFVASVLLMHMDEEVAFWGLVAMLQRPKYLSGYYDQSLNRVQRHARVYRTLLAQRCPDLAAHLDTIGVHPLMYVTQWFMCLFTSIPCWDTVLAIWDAVILEGITTIFRVTLTIMLLCKEELLAMEKMEQVLPHLHHLPANRMRRSVFLPALARVSVDGPDIEAIAGAIQAGIDDDVLSEAPQCPEPKKRRESIIPSIGIPRRLRMAASTVTGKEADPKPSALQKFVRSISNPLGSLLKDSSTAINAGIDRVKEQQLLERARQATGQGIAKAIQTTGEHVSRARQATGVQLSRARDATEAHFAARAAKKARRSLGGADECGDENAHPNGQHVRQMQGPKGVAHRRMTLGGFGAVHHPLATLSGNSTPDATPPQQHGKAMRATDNEPKLRVNNTDATASGSIAASEGKKSPREGSGRRRARATLIRIGHVHAGPLFAPHTQEHLSPRRTAAGRPSTPTSRVHSRGATPVGSPLRSPANDYVTQPYTPAGRKGYRAAELLSPFTTPSAKQVRGVSPLTEMSFREFVTPTPHRAHSRRRTAPHSQATEGGRRKQVRMAPADVPVAGPSTPSRLRFEIPGDADVEAAGVVGDVDCAWQGLDAWAAVGAHTDDIELRFMDAL* # PASA_UPDATE: g8132.t1, single gene model update, valid-1, status:[pasa:asmbl_6310,status:12],[pasa:asmbl_6315,status:12],[pasa:asmbl_6316,status:12], valid-1 NODE_361_length_25970_cov_43.5278 . gene 410 2164 . + . ID=g8132;Name=g8132.t1 NODE_361_length_25970_cov_43.5278 . mRNA 410 2164 . + . ID=g8132.t1;Parent=g8132;Name=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 410 440 . + . ID=g8132.t1.exon1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 410 440 . + 0 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 543 583 . + . ID=g8132.t1.exon2;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 543 583 . + 2 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 676 772 . + . ID=g8132.t1.exon3;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 676 772 . + 0 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 862 944 . + . ID=g8132.t1.exon4;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 862 944 . + 2 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 1024 1578 . + . ID=g8132.t1.exon5;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 1024 1578 . + 0 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . exon 1744 2164 . + . ID=g8132.t1.exon6;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . CDS 1744 1881 . + 0 ID=cds.g8132.t1;Parent=g8132.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 1882 2164 . + . ID=g8132.t1.utr3p1;Parent=g8132.t1 #PROT g8132.t1 g8132 MNVLRSRVSAVRPLARCYSSHQPRKTTALKRMLNSKDLEFLMEAHNGLSARIVQEAGFKGIWGSGLSISAQLGVRDSNEASYTQVLEVLEFMSDATDVPILLDGDTGYGNFNNARRLVRKLEDRGVAGVCMEDKLFPKTNSLLDGRAQPLADVKEFAGKIRACKDTQRDPDFCVVARVEAFIAGWGLEEALKRATAYADAGADAILMHSKKKDPSDIVDFMREWKNRAPVVIVPTNYYTVPTDDFRKLGISTIIWANHNMRSAVSAMQKVTKQIYQDQSLINVEKNIATVKEVFRLQRDHELQEAEDKYLPRDD* # ORIGINAL: g8137.t1 original gene structure, not modified by PASA NODE_361_length_25970_cov_43.5278 AUGUSTUS gene 14537 16514 . + . ID=g8137;Name=g8137.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS mRNA 14537 16514 . + . ID=g8137.t1;Parent=g8137;Name=g8137.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 14537 14984 . + . ID=g8137.t1.exon1;Parent=g8137.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 14537 14984 . + 0 ID=cds.g8137.t1;Parent=g8137.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 15241 16514 . + . ID=g8137.t1.exon2;Parent=g8137.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 15241 16514 . + 2 ID=cds.g8137.t1;Parent=g8137.t1 #PROT g8137.t1 g8137 MATTDAGILAETGLADDGGAAGNREGLLGMEAFPRTDSDTTPFAELSDNRTASQDAAACEPLSQPTGDCGDTPAQNAQPNAPEPVATAAAPPSEVPPPSVIAPAASSPLPPLRRLSMFEHWSSARHESRAYFNFSVGVTVSCPTDKSNEAPMSLTDPTVTGPNGLDSLCACIQEWSSKPLDTAGAAQSQALLWRAALVRSHGAAECDVVLNFHHSLVDGLGGASVLADLVAGQPFDMGSDETGDSQPAAAASRATSPTVAWDLPPAMEDVVSLKPSVGYLIKKLTLKLLVPAVLQRVIVPQDFYVGPRIIPPAEVLADRTLMAHIAVPPKMSARIASLARSHGTTATGALCAAVGFAIAAFDARTKSVAGVSPGPKTPKGVKVAFESAVNQRNAGSVKIDVSKMGSFVVGSDTEAVVGPNTQFWALATAVRDGIMSGIVRARETMGLISFVSTPLEEFMLLQPHTQPNGRNCTVSVSNLGRCVIPDARRLLFSQSCNSIASFVSLSVASIAADGGDQMCLSLTWGSAVATADEGRQLASDLASALRLAVTRDADGLSAHEYMSIVCDDGAGGH* # ORIGINAL: g8141.t1 original gene structure, not modified by PASA NODE_361_length_25970_cov_43.5278 AUGUSTUS gene 24745 25104 . + . ID=g8141;Name=g8141.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS mRNA 24745 25104 . + . ID=g8141.t1;Parent=g8141;Name=g8141.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS exon 24745 25104 . + . ID=g8141.t1.exon1;Parent=g8141.t1 NODE_361_length_25970_cov_43.5278 AUGUSTUS CDS 24745 25104 . + 0 ID=cds.g8141.t1;Parent=g8141.t1 #PROT g8141.t1 g8141 MYATVAHNAAHAHTAEIAMSMGAATRPLPLACGGGVEAIASTLSEKERAMPAHTAAIGLWENAEKAISAHMFMVHPRAQHRVRRSAHRPPTAGGSEASIPDAVKPMLCALLLCEKLTLF* # PASA_UPDATE: g8138.t1, single gene model update, valid-1, status:[pasa:asmbl_6314,status:3], valid-1 NODE_361_length_25970_cov_43.5278 . gene 16670 22375 . - . ID=g8138;Name=g8138.t1 NODE_361_length_25970_cov_43.5278 . mRNA 16670 22375 . - . ID=g8138.t1;Parent=g8138;Name=g8138.t1 NODE_361_length_25970_cov_43.5278 . five_prime_UTR 22144 22375 . - . ID=g8138.t1.utr5p1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 21742 22375 . - . ID=g8138.t1.exon1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 21742 22143 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 21504 21614 . - . ID=g8138.t1.exon2;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 21504 21614 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 21066 21227 . - . ID=g8138.t1.exon3;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 21066 21227 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 20784 20897 . - . ID=g8138.t1.exon4;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 20784 20897 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 20565 20651 . - . ID=g8138.t1.exon5;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 20565 20651 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 20234 20380 . - . ID=g8138.t1.exon6;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 20234 20380 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 19824 19969 . - . ID=g8138.t1.exon7;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 19824 19969 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 18332 19682 . - . ID=g8138.t1.exon8;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 18332 19682 . - 1 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 18026 18163 . - . ID=g8138.t1.exon9;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 18026 18163 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 17761 17885 . - . ID=g8138.t1.exon10;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 17761 17885 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 17188 17425 . - . ID=g8138.t1.exon11;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 17188 17425 . - 1 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . exon 16670 16930 . - . ID=g8138.t1.exon12;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . CDS 16769 16930 . - 0 ID=cds.g8138.t1;Parent=g8138.t1 NODE_361_length_25970_cov_43.5278 . three_prime_UTR 16670 16768 . - . ID=g8138.t1.utr3p1;Parent=g8138.t1 #PROT g8138.t1 g8138 MSSLFDRMRRVSRMGDDAPVNLDDDLDSVDSEAVAALSNAGGAGRRDRDAADASKRQSTFAGAAQSIFGFGGRRPSGHVPHSGDSDKSSERDTDSRVDAHSMGSREDLASEDGVSIAESQDDTVSMQHHEDAKNEKRPIDLSGLEAMRNSRLPLTSKDEELVAALPKSFFTENFDPVELMLQSLPDTLEAAELDSDRKRQWRILQSISKRLSQLVLDNHKSFVQELTRVAELQEELEITKVVCKNGRRHLQKAEEGVNKGGLQILAHTRKRQTLAVLLQCLKGIQTIQRSHEELRRLLDEGNFPKAIDLCVRCQKAANAYKQLNCVREMGGKLQETFELIEDHLDGALKQMCVSFNPAQYELVLTAYELLGRGQRAMDQLHMHFTTAIDGVTHEIVLRHVRDSLPKGIIPPKPLAKMQFQELCGMLDSSRVVTCLADLCRGLCDVMRSHRDLAGWHTRRFTEMEREIAQHSVTGGFGSPAKRTSADLQQLGDVKMKLEHGRKTIWEDIQRKVALFLIPKTLAAFKFDEFIRVLNMVNSMIAVGDEFDGEKSRSLREALKQKTATYFKSFHRFQMENLLAMLENEAWQRCPVSARFSIYRLKEFLFMRREQGGVRAAAVAASGKVAVDQLDQARVLASKFFERYGASGEHPYDALVRSLGADIAAASEFDGDDGAGDDDDSLGPMLTTTTLNYVRLMGRYVHMMDALKPIALDVVIAIAEIFDYYLYAVFRFFGSPGSSLIAGGDDAMMVTQDPALPARLRPTLLRLHEGIGRFAQRQELANQANIRSNPNDASVGLTGFPLPKLSAMVDLTHSDSLFGLGERVTATESLLFLYDVLHSLKPKLQSMVPSANVPVLDRFFTETVDIVPELRVYMYRNISQKVINFEKVMQQMALAKWEIKEIPTQHSAYIETLLLNFQTIESKLTSMGRVRVPPAPYKMLWEQMVLRSFDMFVEGYSQVKKCNNEGRALMMLDFQSFERRLEKITTVKPLPKGEIVRNFVSAYYNDENHMESWVREFGRDYTAKQLTGLIAQHPKSKVLKTKLFPVIEDIERAREADRQRR* # ORIGINAL: g12499.t1 original gene structure, not modified by PASA NODE_14930_length_245_cov_50.8118 AUGUSTUS gene 59 245 . - . ID=g12499;Name=g12499.t1 NODE_14930_length_245_cov_50.8118 AUGUSTUS mRNA 59 245 . - . ID=g12499.t1;Parent=g12499;Name=g12499.t1 NODE_14930_length_245_cov_50.8118 AUGUSTUS exon 59 245 . - . ID=g12499.t1.exon1;Parent=g12499.t1 NODE_14930_length_245_cov_50.8118 AUGUSTUS CDS 59 245 . - 1 ID=cds.g12499.t1;Parent=g12499.t1 #PROT g12499.t1 g12499 VASKGRTTIVIAHRLSTVKNADCIAVVEDGEIMELGTHDELMGFEGRYFDLVNTSMQQHMP* # ORIGINAL: g4671.t1 original gene structure, not modified by PASA NODE_3499_length_3327_cov_41.3333 AUGUSTUS gene 966 3189 . - . ID=g4671;Name=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS mRNA 966 3189 . - . ID=g4671.t1;Parent=g4671;Name=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 3186 3189 . - . ID=g4671.t1.exon1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 3186 3189 . - 0 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 2960 3051 . - . ID=g4671.t1.exon2;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 2960 3051 . - 2 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 2205 2833 . - . ID=g4671.t1.exon3;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 2205 2833 . - 0 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 1714 1855 . - . ID=g4671.t1.exon4;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 1714 1855 . - 1 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 1494 1572 . - . ID=g4671.t1.exon5;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 1494 1572 . - 0 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 1310 1398 . - . ID=g4671.t1.exon6;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 1310 1398 . - 2 ID=cds.g4671.t1;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS exon 966 1103 . - . ID=g4671.t1.exon7;Parent=g4671.t1 NODE_3499_length_3327_cov_41.3333 AUGUSTUS CDS 966 1103 . - 0 ID=cds.g4671.t1;Parent=g4671.t1 #PROT g4671.t1 g4671 MRTHEQTAAALPATPYLIALLSSDNALVQDQAAWALGNIAADGPETRRLLWAQGIVVPLGRLVSHDRPPPVVQSAAFAFSRLVCKGSAELSADLFQAGVAQSLVGLLAFHRASLCAARTAAAQEGRDAPLGTAALSPAQATDVRQIVAEVAWTAVFLTAEQHHERTQALLEMGLGAELVFWICASVADIVGGGDGQNGAIVPLMRTLGNVFTGPDEFTIRLLGIGGHDLLSAIKFLCGCENEMFRYEAMWVLSNMTAATHPDILGALIAAGFVPVLGVLLSYEQSIKKEAVISCLNLAQHGGHLMEAVVAGNVMNEFSSLLSSRDTEMAMMALQMHEMVLRLHPQGREVVQDIGSADRLDALSYSPNRGLASAAADLMSRYFEGEDLEGD* # PASA_UPDATE: g10930.t1, single gene model update, valid-1, status:[pasa:asmbl_10259,status:3], valid-1 NODE_995_length_14960_cov_40.6945 . gene 2151 4932 . - . ID=g10930;Name=g10930.t1 NODE_995_length_14960_cov_40.6945 . mRNA 2151 4932 . - . ID=g10930.t1;Parent=g10930;Name=g10930.t1 NODE_995_length_14960_cov_40.6945 . five_prime_UTR 4644 4932 . - . ID=g10930.t1.utr5p1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . exon 4291 4932 . - . ID=g10930.t1.exon1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . CDS 4291 4643 . - 0 ID=cds.g10930.t1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . exon 3984 4139 . - . ID=g10930.t1.exon2;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . CDS 3984 4139 . - 1 ID=cds.g10930.t1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . exon 3587 3698 . - . ID=g10930.t1.exon3;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . CDS 3587 3698 . - 1 ID=cds.g10930.t1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . exon 2737 3093 . - . ID=g10930.t1.exon4;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . CDS 2737 3093 . - 0 ID=cds.g10930.t1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . exon 2151 2311 . - . ID=g10930.t1.exon5;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . CDS 2180 2311 . - 0 ID=cds.g10930.t1;Parent=g10930.t1 NODE_995_length_14960_cov_40.6945 . three_prime_UTR 2151 2179 . - . ID=g10930.t1.utr3p1;Parent=g10930.t1 #PROT g10930.t1 g10930 MGKAVKNANCSVPWTNTPYCDESFADALGAGYDALQGIYVALTVILIALTLVVWVRLVRVKGFRPLDLQKHIILLVAFCCCTFVIRAVDPVSWRGIVPYVLNGSLCYDLCSAAVYTILFAVVFSWYSVVARTTGRHSSLPTMKKVYYGTIVSLWLSQIVLSIGQATAGPFWAWNAFKMFEMAFFLGLYTVGQTILGIHIYRVLRDAHAAQGRGSELSETGSQSESSLRDPDSQGHMVNNDGSRKKRSLFGGKAMSQKRIQKRAAVVTRILKLLVIATLIELVAFGFEMWSATANFTNRYTLTGTNPQPQPDSVASVLGDVMFDIVQYVACVVTLYFFSSTSEKGSARNTSNNSSSMTGTDTNHPESMAS* # ORIGINAL: g10931.t1 original gene structure, not modified by PASA NODE_995_length_14960_cov_40.6945 AUGUSTUS gene 5478 10451 . - . ID=g10931;Name=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS mRNA 5478 10451 . - . ID=g10931.t1;Parent=g10931;Name=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS exon 10089 10451 . - . ID=g10931.t1.exon1;Parent=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS CDS 10089 10451 . - 0 ID=cds.g10931.t1;Parent=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS exon 9726 9853 . - . ID=g10931.t1.exon2;Parent=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS CDS 9726 9853 . - 0 ID=cds.g10931.t1;Parent=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS exon 5478 9150 . - . ID=g10931.t1.exon3;Parent=g10931.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS CDS 5478 9150 . - 1 ID=cds.g10931.t1;Parent=g10931.t1 #PROT g10931.t1 g10931 MAGHAFASPHVVRSDGGVPWYMRTATVSPMGDPPDAIAMHPTSPVTAQRSHHGLANGLLAPAVPHGFQLPPIPSTRDAHPLESTSKTGIDGTVTVTHTIPKSARRTLSQTSHVSSLTALDKRFDSDDLTKHDYELAAAAVEDALAGRLNHGKASLMKKPLAIQNCFAIQTNKWFAWCIYILIMFHSLIIIAEPPTTHQQWWTQFVCALCIIVYIFDVTLKMIYMGVTDYFSKTWHRVQCALIIAYIVDFGLSFSTPLFPLRCLRPVLLVVRNREMRRVFDVIQVIIPRLGKVLAGIVGFILFFAVIGVHLFSEQYNAPYAKGQYRGAFDNVPAAALRLFSLLTSENYPEVMMPAAVDDPSYMIFFAVFVYIGSFLVMSMLLAIVVDSYWTLTKHQVASEKRKERQGLVKAFVCLDKKASGCIGFRAFRGMYRVLRHKASDPEIRFRFELLERTGTGALNTIDFFAIGEVMQLSVQKVEHVDRLHRPVYATIKARCVAYTSSKISEKVPVVLIAVLCVLYACYWRGMSLATLRGIFAAETLIGVLSACDVFARIIAHGREFLSFSRRIGDLTITMFSLLFFMLYWVGKWEMATVILAPAFVIARLFWSSRVTRQAAVVCLRILPVMIDLSWLIGVVMYFYASVGMSAFDDVQMTDLQYVDIGCRTSFMSFGCAILALFQVVVGNNWNDVMHSLIDTEGYGAAAFYISFVVVVDFVMLNLLIAIAIEAFFNAKKMTADDLTTHEFFVHDSPEGSESASEDGENGENGEVNIDIDFGPNGDGLFDEDGNGSGSGGGGGGHTVLALNMDADDDENAASMSPAGGDNDHVDRAPNHAPRESDVLGELVSSIGGELTDSMGGRKALAAVRRMRSNSEGSKTKFRIHRRASSSWRQEIVGGGDEQRLDKSELEKLSKVAKVDLVNMYRAAMTGSLILGSTQDVAFGDASAAGGESADNDDQQQRLGSAPDAVRTYMMRSARRAKTAVAERRGLMVPQLSAAKSQSFGLASEEPSALSAANSHKRSNSEPRLRHIVSLAVAANAASPTADGATLVDRDPFGAVQKGDARLSRAPVAMPVVMQRSASSAAMTRSASYNAMAASVTVKEDSEATNNSNSKGHSNGDGNVLSRVPSNSNGEEAAAAAAAAVLSDPPPPERVAATVTTPASTLPPIFSRPVDVSVHDALPPDAMAASGHGSFLSTSIISNASTTPMLDTNNSNGGEKKSSKRRRKRHEDKDKTSVRDDADKSDAEAVAKEKRRELRRLKKERSKSASADASGAPGGTGGVAVGTDADSPAKVPKSAKEKRRRKHTAIVTPMAAAGTSGDGSAVGAVGVGSAGDGAGQSVARQTVADSTPARKRSPPADGASSSSPVESRSAASMSADIRGAATLDGAAS* # PASA_UPDATE: g10932.t1, single gene model update, valid-1, status:[pasa:asmbl_10258,status:12], valid-1 # PASA_UPDATE: g10932.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_10257,status:12], valid-1 NODE_995_length_14960_cov_40.6945 . gene 11748 14705 . + . ID=g10932;Name=g10932.t1 NODE_995_length_14960_cov_40.6945 . mRNA 11748 14705 . + . ID=g10932.t1;Parent=g10932;Name=g10932.t1 NODE_995_length_14960_cov_40.6945 . five_prime_UTR 11748 11839 . + . ID=g10932.t1.utr5p1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 11748 11957 . + . ID=g10932.t1.exon1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 11840 11957 . + 0 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 12175 12327 . + . ID=g10932.t1.exon2;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 12175 12327 . + 2 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 12550 13025 . + . ID=g10932.t1.exon3;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 12550 13025 . + 2 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 13324 13678 . + . ID=g10932.t1.exon4;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 13324 13678 . + 0 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 13983 14352 . + . ID=g10932.t1.exon5;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 13983 14352 . + 2 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . exon 14573 14705 . + . ID=g10932.t1.exon6;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . CDS 14573 14705 . + 1 ID=cds.g10932.t1;Parent=g10932.t1 NODE_995_length_14960_cov_40.6945 . mRNA 11748 14705 . + . ID=g10932.t1.1.5b6be70c;Parent=g10932;Name=g10932.t1 NODE_995_length_14960_cov_40.6945 . five_prime_UTR 11748 11839 . + . ID=g10932.t1.1.5b6be70c.utr5p1;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 11748 11957 . + . ID=g10932.t1.1.5b6be70c.exon1;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 11840 11957 . + 0 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 12178 12327 . + . ID=g10932.t1.1.5b6be70c.exon2;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 12178 12327 . + 2 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 12550 13025 . + . ID=g10932.t1.1.5b6be70c.exon3;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 12550 13025 . + 2 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 13324 13678 . + . ID=g10932.t1.1.5b6be70c.exon4;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 13324 13678 . + 0 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 13983 14352 . + . ID=g10932.t1.1.5b6be70c.exon5;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 13983 14352 . + 2 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . exon 14573 14705 . + . ID=g10932.t1.1.5b6be70c.exon6;Parent=g10932.t1.1.5b6be70c NODE_995_length_14960_cov_40.6945 . CDS 14573 14705 . + 1 ID=cds.g10932.t1.1.5b6be70c;Parent=g10932.t1.1.5b6be70c #PROT g10932.t1 g10932 MGSSLSVPNPNDPSVQKQSYAVDDGDWGSAPHRVASRKGEARLLGVEGPYLGTLYDNFRSTATKTPELPCLGTRVFKADGTRGEYRFISYRTVSEKMTLLGSAFRKLGIEAGHKVGIYSINRAEWVITEQACNAYNLVTVALYDTLGASAVRYILNHAEIPLAVISLDKLKALLDACRDGDGVPSLKYIVTFEKPDDESRAAVVSLGKTILSFEEAEKMGTEHPAPHDPPKPDDLAIIMYTSGTTGDPKGVMLTHSNFMSTVNAVLYHGVALQSDDVHFSFLPLAHSFERSVQATVYRVGGSVGFYQGSIPKMVEDIGALRPTIFCGVPRVFNRFYDKVLNTVNAAGGVKASLFHHAYAARLAALKSGQDTPFWNRTVFDKLKLLLGGRVRYMLTGSAPIDSKVLEFLRVCFCPVVMQGYGLTETCAASAVTMYNDVSLGRVGPPLACNEYKLVDVPDMNYFTTDKPCPRGELWIRGTNVFKGYYKMEDKTRDDLDTDGWFHTGDVGQWNVDGSMSIIDRKKNIFKLAQGEYVA* #PROT g10932.t1.1.5b6be70c g10932 MGSSLSVPNPNDPSVQKQSYAVDDGDWGSAPHRVASRKGARLLGVEGPYLGTLYDNFRSTATKTPELPCLGTRVFKADGTRGEYRFISYRTVSEKMTLLGSAFRKLGIEAGHKVGIYSINRAEWVITEQACNAYNLVTVALYDTLGASAVRYILNHAEIPLAVISLDKLKALLDACRDGDGVPSLKYIVTFEKPDDESRAAVVSLGKTILSFEEAEKMGTEHPAPHDPPKPDDLAIIMYTSGTTGDPKGVMLTHSNFMSTVNAVLYHGVALQSDDVHFSFLPLAHSFERSVQATVYRVGGSVGFYQGSIPKMVEDIGALRPTIFCGVPRVFNRFYDKVLNTVNAAGGVKASLFHHAYAARLAALKSGQDTPFWNRTVFDKLKLLLGGRVRYMLTGSAPIDSKVLEFLRVCFCPVVMQGYGLTETCAASAVTMYNDVSLGRVGPPLACNEYKLVDVPDMNYFTTDKPCPRGELWIRGTNVFKGYYKMEDKTRDDLDTDGWFHTGDVGQWNVDGSMSIIDRKKNIFKLAQGEYVA* # ORIGINAL: g10929.t1 original gene structure, not modified by PASA NODE_995_length_14960_cov_40.6945 AUGUSTUS gene 113 642 . + . ID=g10929;Name=g10929.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS mRNA 113 642 . + . ID=g10929.t1;Parent=g10929;Name=g10929.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS exon 113 209 . + . ID=g10929.t1.exon1;Parent=g10929.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS CDS 113 209 . + 0 ID=cds.g10929.t1;Parent=g10929.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS exon 470 642 . + . ID=g10929.t1.exon2;Parent=g10929.t1 NODE_995_length_14960_cov_40.6945 AUGUSTUS CDS 470 642 . + 2 ID=cds.g10929.t1;Parent=g10929.t1 #PROT g10929.t1 g10929 SAHARAVNVIRLEILNNYGDDRFTCLYRFRVHGDITEPIPDVDTTHAHADAEETVESVAPVDGESESEGIHSESGDASSTAHADDDVAV* # PASA_UPDATE: g7848.t1, single gene model update, valid-1, status:[pasa:asmbl_9128,status:3], valid-1 NODE_739_length_18258_cov_42.6422 . gene 12275 13806 . + . ID=g7848;Name=g7848.t1 NODE_739_length_18258_cov_42.6422 . mRNA 12275 13806 . + . ID=g7848.t1;Parent=g7848;Name=g7848.t1 NODE_739_length_18258_cov_42.6422 . five_prime_UTR 12275 12387 . + . ID=g7848.t1.utr5p1;Parent=g7848.t1 NODE_739_length_18258_cov_42.6422 . exon 12275 12784 . + . ID=g7848.t1.exon1;Parent=g7848.t1 NODE_739_length_18258_cov_42.6422 . CDS 12388 12784 . + 0 ID=cds.g7848.t1;Parent=g7848.t1 NODE_739_length_18258_cov_42.6422 . exon 13187 13806 . + . ID=g7848.t1.exon2;Parent=g7848.t1 NODE_739_length_18258_cov_42.6422 . CDS 13187 13677 . + 2 ID=cds.g7848.t1;Parent=g7848.t1 NODE_739_length_18258_cov_42.6422 . three_prime_UTR 13678 13806 . + . ID=g7848.t1.utr3p1;Parent=g7848.t1 #PROT g7848.t1 g7848 MKHVMLSYQWNSQELVKRVYELLKTYGVPVWMDIEGGMGGDINDSMAQGVDNAAVICCFMNEDYVESKNCKRELSYADSADVPIVPCMCAAGWKSHGWLGILTAGLLWIDFRQPDNINKSISSLTREIMHRAGSSLVVRPRSAASTSWAVVKKADLEKKPGRAFKNSKTGLFLAESGEVKVHEASGHRSTLTLLDDYADACYWIEEHQGKGSEILYFKNYVTGSYLGFDPNGDYVYTKSQHYGAEEWILTADETTSSGERSVVIFANYGKKHLAVVDGQLTGVSHHTPECVWELV* # ORIGINAL: g7847.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 9491 10537 . + . ID=g7847;Name=g7847.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 9491 10537 . + . ID=g7847.t1;Parent=g7847;Name=g7847.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 9491 10537 . + . ID=g7847.t1.exon1;Parent=g7847.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 9491 10537 . + 0 ID=cds.g7847.t1;Parent=g7847.t1 #PROT g7847.t1 g7847 MPSPTTPRVLDNERTGTTIHRRERLGIPRVSISEVGVNMNMHVAHASSTHSSLATAFKPPSPQIQLYTAAKTGDVDALYVALGAGADVDGTEDNRGYAALHDASFYGHVDVMQALIEQGASVEMAEHTGGWTPLLWAANRGHVECIRMLISAGACPNMVNLNGSTPIAAAANGGHLECVMALLDAGADPNIVDKDLDSPLMWASAKGFDACAEQLIESGATVSWANDAGDTALHWAGLSGHTGCVELLLAHGADVEARNLKGKTPLMSAAEYGRIGSMSRLIDAGAYVDATDYDGRTALMHAARYNRLVAIHALLGYGAGQATASECMSARRPLQPSRCRVMVDRPRC* # ORIGINAL: g7844.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 153 1370 . + . ID=g7844;Name=g7844.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 153 1370 . + . ID=g7844.t1;Parent=g7844;Name=g7844.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 153 1370 . + . ID=g7844.t1.exon1;Parent=g7844.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 153 1370 . + 0 ID=cds.g7844.t1;Parent=g7844.t1 #PROT g7844.t1 g7844 QLTPLAPIYALWRRTGTATLHVTTQKVFNNRERGCDGCITLSALGDDGCYRTVLRRWDERTMWAYAEERASVDSSFVFWGPSVEEPSVSLVPGFFMQLAACLSLDAGEFPDTPSSTSDWDSVTAFLTDWIVCGVVDGDEHIFPALYTRGTHAADKSIGLAADTQRVLNTAIAVGIVDSAIGQLSRTSRAYVVRFLRRKALSLCSVHSPIFEELEQRQPPSAAAFVLEQGEYSRIRGARVSFLCTVRGEPLCITVACHADAGHNGIACMLAVYATAESAEACAAVGFAATGHRPFEWVAVAWEGASDGKHFAYARREFWRKLSATDSRVVLPDEVRTGSRVERDDVQQWLVEGARDRVHQQSRPTEEEERGAVAMLVRVRDLLFPVDVFSSFHWMPSCEEYTPAWV* # ORIGINAL: g7849.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 14273 15813 . - . ID=g7849;Name=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 14273 15813 . - . ID=g7849.t1;Parent=g7849;Name=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 15766 15813 . - . ID=g7849.t1.exon1;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 15766 15813 . - 0 ID=cds.g7849.t1;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 15277 15435 . - . ID=g7849.t1.exon2;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 15277 15435 . - 0 ID=cds.g7849.t1;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 14878 15022 . - . ID=g7849.t1.exon3;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 14878 15022 . - 0 ID=cds.g7849.t1;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 14466 14644 . - . ID=g7849.t1.exon4;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 14466 14644 . - 2 ID=cds.g7849.t1;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 14273 14338 . - . ID=g7849.t1.exon5;Parent=g7849.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 14273 14338 . - 0 ID=cds.g7849.t1;Parent=g7849.t1 #PROT g7849.t1 g7849 MENETTNGTMDYERRLASRAAVLARRRGTGSPDDDDDEDEMDTHEALRGGEFVRELILSEWDAFAPSVEMADDHDGSCDVGSTDATMCDGHLNRESQEEFDRLLAIMDELTDELKLEEQKLVDQYFAEVEGHEELALQAALDSLDEWVIVCPICRQNRVFQNNRVLFCPCGFRLDTLTDGITLPFLKRQLDYYTALHR* # ORIGINAL: g7846.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 4634 7836 . - . ID=g7846;Name=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 4634 7836 . - . ID=g7846.t1;Parent=g7846;Name=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 7634 7836 . - . ID=g7846.t1.exon1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 7634 7836 . - 0 ID=cds.g7846.t1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 6259 7541 . - . ID=g7846.t1.exon2;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 6259 7541 . - 1 ID=cds.g7846.t1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 5757 5908 . - . ID=g7846.t1.exon3;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 5757 5908 . - 2 ID=cds.g7846.t1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 5450 5577 . - . ID=g7846.t1.exon4;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 5450 5577 . - 0 ID=cds.g7846.t1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 5029 5168 . - . ID=g7846.t1.exon5;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 5029 5168 . - 1 ID=cds.g7846.t1;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 4634 4785 . - . ID=g7846.t1.exon6;Parent=g7846.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 4634 4785 . - 2 ID=cds.g7846.t1;Parent=g7846.t1 #PROT g7846.t1 g7846 MAEAVQAQLEEMLPELHEFEQKGLFSKAEIKQIVKKRTAFEYALRRRQPEKRDFLRYIEYELNLDLLRRKRKERLGVTKKNSNGEFAIQRRIHFIFHRAEQKFKGDVALWLQHVDFCKRTGASRMLNKVFAQALQFHPANASLWVLAAKWEFEETGNVNTARVLMQRGIRLNTESRLLWREYFRLELTYVERLRARRKILGIGAKDAGSDARLKATGESLAIPAVAGEEDAAAHDSTTAEATPLEIVLSGAIPRVVYTNAVAALSGDADLRMALANICRQFPDDVAILDQIYSDLARDFASNETVRAFIAVRPYDDALASGDDTRVNAGEMAASRNLYATAESLGTSAMYDAAGAFHLRLLGNVSAAPASATTTNATDVSATKDEDSDSEGDDDSPATASAWRSSGLLSRERADFHMDRLIELSSHAIERGVASEWLLGERVAALVDVGEVTKALECAREATDGGKHKEKKAVTKSAAVWLLRLRLEIAEAAASHANARQFVDASHRAFSRAVTCVEGNGLVNLYELWIEYCCALGDAHKTADCFEAAVRIHGNQDLNALVSRVKLQYIEWACMSGGIERAREVYSRRVLLAMLSVPIELLMRCIAVENSQPLPDRARIVHLYERAVSSYGSNNAELWLEYISSELSHGRPEEVGNLYWRALKHLDDASTFVQCYNVLRVSGSTH* # ORIGINAL: g7845.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 1629 3463 . - . ID=g7845;Name=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 1629 3463 . - . ID=g7845.t1;Parent=g7845;Name=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 3006 3463 . - . ID=g7845.t1.exon1;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 3006 3463 . - 0 ID=cds.g7845.t1;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 2467 2822 . - . ID=g7845.t1.exon2;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 2467 2822 . - 1 ID=cds.g7845.t1;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 2062 2171 . - . ID=g7845.t1.exon3;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 2062 2171 . - 2 ID=cds.g7845.t1;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 1629 1826 . - . ID=g7845.t1.exon4;Parent=g7845.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 1629 1826 . - 0 ID=cds.g7845.t1;Parent=g7845.t1 #PROT g7845.t1 g7845 MLNCRDSASWHCICLPELFCVWPFGSLGHPIGAASPRLRVAIVGAGRIGKIHAETIAYQVPNAEVTLVASGRLDTAKALADRLRVPRYTDNYNDVVSSSDVDAVVICSPTDQHAPQIVAAAKAGKHIFCEKPVALDLGVVDSTLDVVEKSGVKFMIGFNRRYDANFRRVQQAVTKGEVGDTRMVHIVSRDPAPPSAAYVKTSGGMFLDMAIHDFDMARYVVGEDSEVEEVYTKASCVVNPEIGAAGDFDTAVTMLTFANGVVATIDNCREAVYGYDQRIEVFGSAGSVSSENVFPNVCTFRGRTAVYTDLPLNFFMERYLSAYKEEMQEFVRACASNGPITATASDARAALVIALAARKSAVEKRPVKISEIA* # ORIGINAL: g7850.t1 original gene structure, not modified by PASA NODE_739_length_18258_cov_42.6422 AUGUSTUS gene 16611 17756 . - . ID=g7850;Name=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS mRNA 16611 17756 . - . ID=g7850.t1;Parent=g7850;Name=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 17676 17756 . - . ID=g7850.t1.exon1;Parent=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 17676 17756 . - 0 ID=cds.g7850.t1;Parent=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 17107 17289 . - . ID=g7850.t1.exon2;Parent=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 17107 17289 . - 0 ID=cds.g7850.t1;Parent=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS exon 16611 16922 . - . ID=g7850.t1.exon3;Parent=g7850.t1 NODE_739_length_18258_cov_42.6422 AUGUSTUS CDS 16611 16922 . - 0 ID=cds.g7850.t1;Parent=g7850.t1 #PROT g7850.t1 g7850 MNYVVWSFSRLHLIIFRHRHSVRAEATVAALSAQVVALSAQVAALSSVPEQFAALPAVIGAIQSASTLRSFNHDAHREGEILKILPVTATAPGPLPHALLSRHPPAQQALATFIAAPWVDRISTCPGHIQSAPRNTRGSNSHYVFPNTKAAIANMTEEQIVRLMVFYGDSMRITDDDPLDAMRLKVLLFAA* # ORIGINAL: g12531.t1 original gene structure, not modified by PASA NODE_349_length_26321_cov_71.7171 AUGUSTUS gene 15890 18420 . - . ID=g12531;Name=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS mRNA 15890 18420 . - . ID=g12531.t1;Parent=g12531;Name=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 18389 18420 . - . ID=g12531.t1.exon1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 18389 18420 . - 0 ID=cds.g12531.t1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 17589 18070 . - . ID=g12531.t1.exon2;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 17589 18070 . - 1 ID=cds.g12531.t1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 17269 17427 . - . ID=g12531.t1.exon3;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 17269 17427 . - 2 ID=cds.g12531.t1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 17039 17082 . - . ID=g12531.t1.exon4;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 17039 17082 . - 2 ID=cds.g12531.t1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 16514 16701 . - . ID=g12531.t1.exon5;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 16514 16701 . - 0 ID=cds.g12531.t1;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 15890 16196 . - . ID=g12531.t1.exon6;Parent=g12531.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 15890 16196 . - 1 ID=cds.g12531.t1;Parent=g12531.t1 #PROT g12531.t1 g12531 MYGNMFLLQICDSISDVEEAQRERTRQRKAAQSTGDSSQSATAESADQRISIPPRIPGSDGVDSSQNGGNERTPFATHTNHKQSHGSLHNNNEGGLDEGGSKWHLTHHELESRRVETNRLSVTAVHEHYDPAKYELRRLLVEFLGTEIITFTHAGLSILHRRYGPEVFTLSGVAWASGATLIFLIYALGHISGAHFNPSITFALTARRLFPWRHVPFYWIVQFGGGFVGALLLDAIFGTAQNLGANEPQHGFTIVEAFFWETMLSFFLVFVVLHVVERGNLVGPNAALAVGATIAMDVYMGEYFGGGSMNPARSLGPGVLGGLADVVWIYCVAPFLDAAITLFFQYLGGTTVTNRDAKKVAEGRGKSSDELAALSLVKVALPYVGWRRLQKGVFSLAGRARRL* # PASA_UPDATE: g12532.t1, single gene model update, valid-1, status:[pasa:asmbl_6140,status:12], valid-1 NODE_349_length_26321_cov_71.7171 . gene 18703 20770 . + . ID=g12532;Name=g12532.t1 NODE_349_length_26321_cov_71.7171 . mRNA 18703 20770 . + . ID=g12532.t1;Parent=g12532;Name=g12532.t1 NODE_349_length_26321_cov_71.7171 . exon 18703 19080 . + . ID=g12532.t1.exon1;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . CDS 18703 19080 . + 0 ID=cds.g12532.t1;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . exon 19245 19953 . + . ID=g12532.t1.exon2;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . CDS 19245 19953 . + 0 ID=cds.g12532.t1;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . exon 20077 20770 . + . ID=g12532.t1.exon3;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . CDS 20077 20732 . + 2 ID=cds.g12532.t1;Parent=g12532.t1 NODE_349_length_26321_cov_71.7171 . three_prime_UTR 20733 20770 . + . ID=g12532.t1.utr3p1;Parent=g12532.t1 #PROT g12532.t1 g12532 MENVKCVVVGDGSVGKSCLLISYTTNAFPGEYVPTVFDNYSANVMVDGRPINLGVWDTAGQEDYDRLRPLSYPQTDVFIVCFSVVSPSSLENVRAKWALELRHHCPQTPMIVVGAKADLRPHGAKRGVKCVSYAEGLAVANEIGALAYHEVSALTQDGVKALFDSVIRCAISPSGKALARKSIFGSSKSKNGKPVPLPPTLPLPAHAPWINVVTSTFADDMREMLDSPLFADVVFVAEQRAVHAHRAILCAASDFMCRVFHVQSPGCGIGDFVDASAGGVPGITSMHVSDDGRTTTVHMAGDITQKGMCRVLEFLYTGCATISDARDGIPETVHAARTLSCSHLVTACENIARNEQYLNPSIGTWLNDEMGSRARQMFLSRDTLSDVSFSVGGQIIRGHRAFVHARCPAMRSMVAGIFAEGSGDGPVHIAGTTLDNFRAVLEFLYTGHAITHLEEGDPVGILVLADMHNLPVLLSLCELYISKAVERAVERSIAKADIDIIGLLNCARMHNADQLAAFCRHFVCTNYQPLKNKPEFANLSPDDAEYVDANQWPPREYMDDVKAYEALVAGSEQKDRCSVM* # PASA_UPDATE: g12526.t1, single gene model update, valid-1, status:[pasa:asmbl_6137,status:3], valid-1 # PASA_UPDATE: g12526.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6138,status:12], valid-1 NODE_349_length_26321_cov_71.7171 . gene 5229 7395 . + . ID=g12526;Name=g12526.t1 NODE_349_length_26321_cov_71.7171 . mRNA 5229 7395 . + . ID=g12526.t1;Parent=g12526;Name=g12526.t1 NODE_349_length_26321_cov_71.7171 . five_prime_UTR 5229 5720 . + . ID=g12526.t1.utr5p1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . five_prime_UTR 5895 5963 . + . ID=g12526.t1.utr5p2;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 5229 5720 . + . ID=g12526.t1.exon1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 5895 6039 . + . ID=g12526.t1.exon2;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . CDS 5964 6039 . + 0 ID=cds.g12526.t1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 6229 6365 . + . ID=g12526.t1.exon3;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . CDS 6229 6365 . + 2 ID=cds.g12526.t1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 6502 6624 . + . ID=g12526.t1.exon4;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . CDS 6502 6624 . + 0 ID=cds.g12526.t1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 6797 7021 . + . ID=g12526.t1.exon5;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . CDS 6797 7021 . + 0 ID=cds.g12526.t1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . exon 7217 7395 . + . ID=g12526.t1.exon6;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . CDS 7217 7282 . + 0 ID=cds.g12526.t1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . three_prime_UTR 7283 7395 . + . ID=g12526.t1.utr3p1;Parent=g12526.t1 NODE_349_length_26321_cov_71.7171 . mRNA 5229 7395 . + . ID=g12526.t1.1.5b6be70b;Parent=g12526;Name=g12526.t1 NODE_349_length_26321_cov_71.7171 . five_prime_UTR 5229 5280 . + . ID=g12526.t1.1.5b6be70b.utr5p1;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 5229 5334 . + . ID=g12526.t1.1.5b6be70b.exon1;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 5281 5334 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 5613 5720 . + . ID=g12526.t1.1.5b6be70b.exon2;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 5613 5720 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 5895 6039 . + . ID=g12526.t1.1.5b6be70b.exon3;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 5895 6039 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 6229 6365 . + . ID=g12526.t1.1.5b6be70b.exon4;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 6229 6365 . + 2 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 6502 6624 . + . ID=g12526.t1.1.5b6be70b.exon5;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 6502 6624 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 6797 7021 . + . ID=g12526.t1.1.5b6be70b.exon6;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 6797 7021 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . exon 7217 7395 . + . ID=g12526.t1.1.5b6be70b.exon7;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . CDS 7217 7282 . + 0 ID=cds.g12526.t1.1.5b6be70b;Parent=g12526.t1.1.5b6be70b NODE_349_length_26321_cov_71.7171 . three_prime_UTR 7283 7395 . + . ID=g12526.t1.1.5b6be70b.utr3p1;Parent=g12526.t1.1.5b6be70b #PROT g12526.t1 g12526 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGTNTLACISRIDTDLSKSVKIYPLPHMYVVKDLVPDMTNFYDQHKSVEPYLKRKDEAPVDRNTKEYPQSVTDRKKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLQAYRWMADSRDQFTKERMEKMQDPFSVYRCHTIMNCSKTCPKGLNPGKAIAEIKKEMGLLGSS* #PROT g12526.t1.1.5b6be70b g12526 MSLCQQAHMRAALRQLPRLLAAVPQRAASTAVKPPPKAAENAAPRYKNFAIYRWDPETPGDKPHIQNYKVDLNACGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGTNTLACISRIDTDLSKSVKIYPLPHMYVVKDLVPDMTNFYDQHKSVEPYLKRKDEAPVDRNTKEYPQSVTDRKKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLQAYRWMADSRDQFTKERMEKMQDPFSVYRCHTIMNCSKTCPKGLNPGKAIAEIKKEMGLLGSS* # ORIGINAL: g12528.t1 original gene structure, not modified by PASA NODE_349_length_26321_cov_71.7171 AUGUSTUS gene 11350 14412 . + . ID=g12528;Name=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS mRNA 11350 14412 . + . ID=g12528.t1;Parent=g12528;Name=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 11350 11429 . + . ID=g12528.t1.exon1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 11350 11429 . + 0 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 11618 11735 . + . ID=g12528.t1.exon2;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 11618 11735 . + 1 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 11837 11928 . + . ID=g12528.t1.exon3;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 11837 11928 . + 0 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 12592 12707 . + . ID=g12528.t1.exon4;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 12592 12707 . + 1 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 12844 12947 . + . ID=g12528.t1.exon5;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 12844 12947 . + 2 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 13140 13265 . + . ID=g12528.t1.exon6;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 13140 13265 . + 0 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 13500 13580 . + . ID=g12528.t1.exon7;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 13500 13580 . + 0 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 13889 14003 . + . ID=g12528.t1.exon8;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 13889 14003 . + 0 ID=cds.g12528.t1;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 14243 14412 . + . ID=g12528.t1.exon9;Parent=g12528.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 14243 14412 . + 2 ID=cds.g12528.t1;Parent=g12528.t1 #PROT g12528.t1 g12528 MGCLSSKAATAEGGSTTGGTDAPKYSWDKEDKPDPKDFMLSNITGQTLHRSPGKIKGFNFVIENLTDCTVYLCDYADSITIDDCKNCRFFIGPVKGRSRDCRRFDVGILCRTQPIIETSSEMNFACLQAHYDGLKEQFVAAGLSIYHNEWGTIHDFSPSSGDSNWHIMPEPVSMEAMVPPPPADVGVAGWSTSYAASDVPLSIGDRKKPSSEMGLIVFCGSGASNAEAITSFIARLRVENDRIKIVETRDVRMPAAPCERFFANDGNKAALVQSAAKGTVVGFVLCGEGCGSIASEWAASAASLESKIRITTGDAAPKAIEQFFSAIALCAAV* # ORIGINAL: g12527.t1 original gene structure, not modified by PASA NODE_349_length_26321_cov_71.7171 AUGUSTUS gene 7593 10736 . - . ID=g12527;Name=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS mRNA 7593 10736 . - . ID=g12527.t1;Parent=g12527;Name=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 10416 10736 . - . ID=g12527.t1.exon1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 10416 10736 . - 0 ID=cds.g12527.t1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 9948 10067 . - . ID=g12527.t1.exon2;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 9948 10067 . - 0 ID=cds.g12527.t1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 9522 9805 . - . ID=g12527.t1.exon3;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 9522 9805 . - 0 ID=cds.g12527.t1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 9010 9349 . - . ID=g12527.t1.exon4;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 9010 9349 . - 1 ID=cds.g12527.t1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 8828 8873 . - . ID=g12527.t1.exon5;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 8828 8873 . - 0 ID=cds.g12527.t1;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 7593 8530 . - . ID=g12527.t1.exon6;Parent=g12527.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 7593 8530 . - 2 ID=cds.g12527.t1;Parent=g12527.t1 #PROT g12527.t1 g12527 MDTASGASGVVGVDVRGPTAVDAGVSVSCVRTEGPSLAAAGNGAGCVDGDRTANRTLADRGRSACSSGEDDERCTLDRPDASHADSGTVNAGDAISTVERLPADYGHSYRCQLPFIFRSAGERIMPIAEYDCELLSPPWLVNVGGIKLPKCRLCNQATAVVYCQHDDANLCSRCDERIHGANAVVAAHTRSFCRDIEWYIDGARQFLGAAALYLRARPPRFNRSKHIVGLPLVGTGKGGAGQSTGGVVARLLPELYRAARMHGMDIALVVNDRSKFAAVQVMRNRHEEAWSLLGDPELVSQARRLAGHARRGDLVLFLGAGISTGAGLPTWGELITDLAAQAGMTDEERRMLGEMNYLDAARIVELHLGGRLPVKEAVTTNYNEMFEIASRGAGLSVAVLPYSPASNCDRWLLKMHGCASHPEDIVLTREDYLRYATRRSALQGIVQSLLITRHMLFVGFSLQDDNFHRIVDEVRRALSSSEPLATRADRTRLQDDGMGGKERGNERRSQRTEPFGTSLSLFRNHIVDMLWKEDLNMVAMKNERKQDAPGAARQMEIFLDYLSSESTTTAAYLLKPQYDALLTEDQRTLRNHIIDFVGGLPSNARNAPEWAVVVRMVLALGGDGVAADGGTGGGPTATDSGGGDEHADDTHSAGRMGSWLGSTLLDGLPPASLTSRAMNGQT* # ORIGINAL: g12533.t1 original gene structure, not modified by PASA NODE_349_length_26321_cov_71.7171 AUGUSTUS gene 20842 25103 . - . ID=g12533;Name=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS mRNA 20842 25103 . - . ID=g12533.t1;Parent=g12533;Name=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 22206 25103 . - . ID=g12533.t1.exon1;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 22206 25103 . - 0 ID=cds.g12533.t1;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 21893 22066 . - . ID=g12533.t1.exon2;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 21893 22066 . - 0 ID=cds.g12533.t1;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 21618 21752 . - . ID=g12533.t1.exon3;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 21618 21752 . - 0 ID=cds.g12533.t1;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 21166 21292 . - . ID=g12533.t1.exon4;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 21166 21292 . - 0 ID=cds.g12533.t1;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 20842 20966 . - . ID=g12533.t1.exon5;Parent=g12533.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 20842 20966 . - 2 ID=cds.g12533.t1;Parent=g12533.t1 #PROT g12533.t1 g12533 MADSDDDLPHDTLSSIGEADFTLSSIGDANVTVSSLGEANLSLSRNADAADDQAWHGERQNAHGSHVADEDVASAAEWASPSASASASGSEAHPAQLQVAHYLDALLSTVGSAAHVSGAHRTARQQSKSHIAVERMGHDWTVPAGAVDTDSASESGPDDSADIALEAHVTTDDDADYIDYAVNKSEHNSKDLRLGANAGHPTPLFQHDVAATGFSTPVRSQPGEVHSQEGGATPLSARSGLGSTTPHSIEETEWAMSTWGSLPDGGLSLGYGGHPALCPPDSYSSDDASWSPTDIGLGSSASRLAPSTTASAPLTTIAGSPATARAVDNRHLGDAGQQRSTGAEEAAHVQASLSPDRIPQRRPREDKAVGPASVDRSTGLHAGGGGERAVHSRSPQRSMSDRSQQTSRQESHAIQTSTSAVRDAMHGHATSRDRATPHQSSASRGRSQGDTSASQSATWTQPQAQPSRPRSAMSVTWSQHLRDKSPASSRSERHRSHHSAILSESSASQGHSAWASLEQPLASYPSSPLPFHAPSVGASSEFGDRVGSRVDEYAFVLRREIKEREDERARFAAREAQLNDELSVLRLRLTDAESRAAQTAGSEQATAHATSSLRAANDALAQRLAASEAEVRRLQTYIGRDRPGQVLRGSAARESERAELDALRARLARTQESERLLGVRVSALEEIARVSENAASKVLASAPGGGSALPPDAASELLTKWRKRVYELLVGRRLDDLARQSEVAQLRRELDGLRRALEQEGARTRLANSVAGDCRAQLSMAEAAVHAADARGVALAANLKDVENELSVARDERARVRESLAAGTHALRTMYESACAAVRRADVQSQRLSFAADRLGVASDLVARKLRPPPPRFDQGTMTGEGGPSADAWESACPDDAPLVGLLRGELGRLSVERTELVRQLQTQADAQQAALDAATAPLRLAVAALTERASRLDAAVEDARAETQAARDQHTADIVRLNSDRESLLASAVRAERDLWAPRMEAAAAEADDLRRQLARATASLSQLERHVARQRTKHDSADTAHAEVLRSKLDEAERSLRSLWAERNALLLAVREYQRLASSGPAVRRGSRPLTAILRGDANSGGFVAMGQKGDERPDDIQARLRTLAAAASQLLADDDGFDDGTDDGHPRGE* # ORIGINAL: g12525.t1 original gene structure, not modified by PASA NODE_349_length_26321_cov_71.7171 AUGUSTUS gene 2911 4652 . - . ID=g12525;Name=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS mRNA 2911 4652 . - . ID=g12525.t1;Parent=g12525;Name=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 4255 4652 . - . ID=g12525.t1.exon1;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 4255 4652 . - 0 ID=cds.g12525.t1;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 3876 4068 . - . ID=g12525.t1.exon2;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 3876 4068 . - 1 ID=cds.g12525.t1;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 3485 3646 . - . ID=g12525.t1.exon3;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 3485 3646 . - 0 ID=cds.g12525.t1;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 3187 3336 . - . ID=g12525.t1.exon4;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 3187 3336 . - 0 ID=cds.g12525.t1;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS exon 2911 3060 . - . ID=g12525.t1.exon5;Parent=g12525.t1 NODE_349_length_26321_cov_71.7171 AUGUSTUS CDS 2911 3060 . - 0 ID=cds.g12525.t1;Parent=g12525.t1 #PROT g12525.t1 g12525 MGRKKTSASVQEHAPNRARGRPRKASNTPALAVIQQQRPRGRPRTRSAAAAAEHAPVADDFVVDALHEEDDDDLVSELECEADGDSVNGGRAEHPAPAPPQMTPAEAYRFFLDSADGTRRSSLSPKTRKDHARYARLLTEHYAKLGLDIGCFDANTPNHVMGFLHSFCGGSVPSSASTGVDFDEVLKNLPFVCKDNKYPSARCARAGIAYFMRETYNRTGDWIEESPGVFRGNPCLSPRVREYMKGLLKAMIQNGYMPQQRRAITKEEVAALGEYNMYNFRAAREAQPENPSAGVKFLQAQAMNVLAFDLLLRSDEVLRLDLSMFCIATPGMPNPVDTVKLDFRKNKQTG* # PASA_UPDATE: g12530.t1, single gene model update, valid-1, status:[pasa:asmbl_6139,status:12], valid-1 NODE_349_length_26321_cov_71.7171 . gene 15169 15907 . + . ID=g12530;Name=g12530.t1 NODE_349_length_26321_cov_71.7171 . mRNA 15169 15907 . + . ID=g12530.t1;Parent=g12530;Name=g12530.t1 NODE_349_length_26321_cov_71.7171 . five_prime_UTR 15169 15262 . + . ID=g12530.t1.utr5p1;Parent=g12530.t1 NODE_349_length_26321_cov_71.7171 . exon 15169 15352 . + . ID=g12530.t1.exon1;Parent=g12530.t1 NODE_349_length_26321_cov_71.7171 . CDS 15263 15352 . + 0 ID=cds.g12530.t1;Parent=g12530.t1 NODE_349_length_26321_cov_71.7171 . exon 15474 15907 . + . ID=g12530.t1.exon2;Parent=g12530.t1 NODE_349_length_26321_cov_71.7171 . CDS 15474 15818 . + 0 ID=cds.g12530.t1;Parent=g12530.t1 NODE_349_length_26321_cov_71.7171 . three_prime_UTR 15819 15907 . + . ID=g12530.t1.utr3p1;Parent=g12530.t1 #PROT g12530.t1 g12530 MVASVSFTSIPVVLILAYVPHFVKAGVYNYISSGRYDNVMPRRQWDASNPHLAKSPLGKLIMRASYAHANGLENFPAWAAAVLAAHARGVDESVVAPLAIAHMASRAVYDLAYIFGSTVPMSMLRSVAWLVSMGTTLYVMYLAC* # PASA_UPDATE: g12529.t1, single gene model update, valid-1, status:[pasa:asmbl_6135,status:12], valid-1 NODE_349_length_26321_cov_71.7171 . gene 14518 14968 . - . ID=g12529;Name=g12529.t1 NODE_349_length_26321_cov_71.7171 . mRNA 14518 14968 . - . ID=g12529.t1;Parent=g12529;Name=g12529.t1 NODE_349_length_26321_cov_71.7171 . five_prime_UTR 14862 14968 . - . ID=g12529.t1.utr5p1;Parent=g12529.t1 NODE_349_length_26321_cov_71.7171 . exon 14518 14968 . - . ID=g12529.t1.exon1;Parent=g12529.t1 NODE_349_length_26321_cov_71.7171 . CDS 14631 14861 . - 0 ID=cds.g12529.t1;Parent=g12529.t1 NODE_349_length_26321_cov_71.7171 . three_prime_UTR 14518 14630 . - . ID=g12529.t1.utr3p1;Parent=g12529.t1 #PROT g12529.t1 g12529 MMGRSAKTHKRAKTAQKETSGDGAAHDTDSAHGGDVHVHAQGAGVAKTKRADKKNGGKDSASKKTLARALALAKKK* # PASA_UPDATE: g5683.t1, single gene model update, valid-1, status:[pasa:asmbl_8766,status:12], valid-1 NODE_667_length_19295_cov_42.8538 . gene 17149 19147 . + . ID=g5683;Name=g5683.t1 NODE_667_length_19295_cov_42.8538 . mRNA 17149 19147 . + . ID=g5683.t1;Parent=g5683;Name=g5683.t1 NODE_667_length_19295_cov_42.8538 . five_prime_UTR 17149 17311 . + . ID=g5683.t1.utr5p1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 17149 17440 . + . ID=g5683.t1.exon1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 17312 17440 . + 0 ID=cds.g5683.t1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 17635 17840 . + . ID=g5683.t1.exon2;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 17635 17840 . + 0 ID=cds.g5683.t1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 18041 18146 . + . ID=g5683.t1.exon3;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 18041 18146 . + 1 ID=cds.g5683.t1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 18337 18430 . + . ID=g5683.t1.exon4;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 18337 18430 . + 0 ID=cds.g5683.t1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 18740 18774 . + . ID=g5683.t1.exon5;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 18740 18774 . + 2 ID=cds.g5683.t1;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . exon 19010 19147 . + . ID=g5683.t1.exon6;Parent=g5683.t1 NODE_667_length_19295_cov_42.8538 . CDS 19010 19147 . + 0 ID=cds.g5683.t1;Parent=g5683.t1 #PROT g5683.t1 g5683 MSLRLGMSALRASVERVAVTRAHRCMSTFNIDSITGLTDSQRELRSTVTKFCQEKLAPFAAEIDKTNDFKNLRQFWKDMGSLGLLGITAPEKYGGTDLGYLEHCIVMEEISRASGAIALSYGAHSNLCINQIVRNGNEAQKAKYLPKLISGEHMGALAMSEPGSGSDVVSMKLTATKKGNEYVLNGNKFWITNGPDADVLVVYAKTEPGAGPKGVTAFLIEKVHLELGCLLPETS* # ORIGINAL: g5682.t1 original gene structure, not modified by PASA NODE_667_length_19295_cov_42.8538 AUGUSTUS gene 15125 16468 . + . ID=g5682;Name=g5682.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS mRNA 15125 16468 . + . ID=g5682.t1;Parent=g5682;Name=g5682.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 15125 16468 . + . ID=g5682.t1.exon1;Parent=g5682.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 15125 16468 . + 0 ID=cds.g5682.t1;Parent=g5682.t1 #PROT g5682.t1 g5682 MLSDEAVQVVLENGPFSLLDAIEHSSNQYEEEVSNMASFLRMRIIILSAVPLSCIIVIFVVVILPALLRLETRKAELMRIFLAIPRRVVRTLIDKDRIRLESMLARADFAHDMELDDGYAPQPSTDGTHRTEGDITASASGSTSSLNNARRVARTRETWTRRASSSLRAQRGVLLRLLVLVIACASYCIALLVVGESLMSDVGASGKEINWSDRRSSIARLVFYHTRESVVADTIAASVESASMVTAYTNTLLEIEDGLLYGSVAMDVVASVRRSDISELMFGNGCAFVPAVPSGYPECSEFDNGIMTLGLNSAMFEYCGRAVQMAVLAANMTRPTSFEAMRKLVRTMPGLMFVRMMDWAYVQGPLEAATSLYEQYGVSKVTSFENFVLVISLVEIFAVALLWLFVFRPMTARIEGQIRNNRLMVLMVPVDEAPSLAASIRSFLVDW* # ORIGINAL: g5680.t1 original gene structure, not modified by PASA NODE_667_length_19295_cov_42.8538 AUGUSTUS gene 7987 8694 . - . ID=g5680;Name=g5680.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS mRNA 7987 8694 . - . ID=g5680.t1;Parent=g5680;Name=g5680.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 8548 8694 . - . ID=g5680.t1.exon1;Parent=g5680.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 8548 8694 . - 0 ID=cds.g5680.t1;Parent=g5680.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 7987 8334 . - . ID=g5680.t1.exon2;Parent=g5680.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 7987 8334 . - 0 ID=cds.g5680.t1;Parent=g5680.t1 #PROT g5680.t1 g5680 MLPLLLKPGSPRSNNADLEVSVPMSTTNGTATDAPKRTMTPTSLKSVDAKARRWTLGSDSIPPIPSESLTPTPSSPTPSSPTPFGSRSPPFGRHLVLDRAKALATELSLLNRKSCVDELLNKCDEMRDSEKGLFSLLGEIETIVENMDTRLPQLSESPLIRRTD* # ORIGINAL: g5681.t1 original gene structure, not modified by PASA NODE_667_length_19295_cov_42.8538 AUGUSTUS gene 10192 14908 . + . ID=g5681;Name=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS mRNA 10192 14908 . + . ID=g5681.t1;Parent=g5681;Name=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 10192 10689 . + . ID=g5681.t1.exon1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 10192 10689 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 10973 11104 . + . ID=g5681.t1.exon2;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 10973 11104 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 11257 11435 . + . ID=g5681.t1.exon3;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 11257 11435 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 11606 12286 . + . ID=g5681.t1.exon4;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 11606 12286 . + 1 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 12376 12519 . + . ID=g5681.t1.exon5;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 12376 12519 . + 1 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 12635 12940 . + . ID=g5681.t1.exon6;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 12635 12940 . + 1 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 13037 13139 . + . ID=g5681.t1.exon7;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 13037 13139 . + 1 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 13281 14042 . + . ID=g5681.t1.exon8;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 13281 14042 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 14149 14553 . + . ID=g5681.t1.exon9;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 14149 14553 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 14651 14908 . + . ID=g5681.t1.exon10;Parent=g5681.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 14651 14908 . + 0 ID=cds.g5681.t1;Parent=g5681.t1 #PROT g5681.t1 g5681 MESIVEGETDFCSKSVGSVESRRSNKKKSKRSLLTLLKSGLFGVLFITVKDSSVQAFAAIIEIIVDAFQVLAFPFSHRFNFPWNHAATDWFARLCSIFVPEVYVSGQDGWFLAGLALVIIMLADVIIVGYSFSRKSYKMMWTIKLLRTFGGLFSTILFIPLLGLLTGKLSCDYLEDCATGIDLTYKIVSVIVSLLFIFFALCTAATFYDQDPKGRDVLARPHARIDLFYLLVRTVLTIMQNIVPVTHVGSWIFIATMVAGSLASAFLHTWYIPYYRFSYSKLRNATQWLFASGCLCVVLAQARNNPDQTEASVLFFLSSPMVVALSICSISARRRALFAKKIRMCRDPYEVELRIRFALEYENMLFAVEDESDVDGESNGAQAAARLATLRSINAMYAEAVKRRPTSSLLHVFWAHYYLLHLGNSNMALAELANAEGQSPPLDEQFLIYRRQSLLSEAASQSCGDSGVDIIAYVQYQKHLADSEKFDRRVAGSRAAFWTELGRAHPDMQKLHSLGELISLNLSRAIASYESLLKLAPESPQVLRMYASFLMDIMNEVGDGEELVARAENIEDALSKTAQSDDCGITFDERNATITISGVREREGIILDVNMAACRLFGYRRHDMIGKNVNMLIPSPIAKNHNRIVANYLASGYGSMLDRKRKVVCIHANGYIVPANIVIRQAIDPQGSTCFVGVLRAIVSQEHFVVLDPTGKLLSCTAGVTSLFDKTIESINDGEVHITSIIPEYATIADSALAATKGSVKPPVLHQVCGVSQSLRTLTISCERMESLGEFIDIVSFSAVSDEIATEHPLPQFGTEYLPSRGMSDVLPPLLPQPANQTCINQQNSPEEDSCATYCRAPPMPRRRDASRKPSGHSQQAPSSIDYGLYGMPDQYDTKMEGEQEQATTQNEMVMRSRASVRFGSADISQPNCVIQLNEVEMEEGDSRSTDAQGLVQSGVRASFDNANDNKKKKSVGGSIASSGGTETSMRQRTRTIIEDKNDRSAAETLCIKRGSLLAVTIVIGLAIASIILLRMAAAQYKDTVVCVTEGGTRRLDTVTVARDVRTLALAAANMSVDVQLSALREELMTSAMRLKEHQAKLFTGGHCLTSQLESTYLTKAVPMLIPGSGTQMMNLWEAVQLYVMKAMQARLPTQYMST* # ORIGINAL: g5679.t1 original gene structure, not modified by PASA NODE_667_length_19295_cov_42.8538 AUGUSTUS gene 638 1699 . - . ID=g5679;Name=g5679.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS mRNA 638 1699 . - . ID=g5679.t1;Parent=g5679;Name=g5679.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS exon 638 1699 . - . ID=g5679.t1.exon1;Parent=g5679.t1 NODE_667_length_19295_cov_42.8538 AUGUSTUS CDS 638 1699 . - 0 ID=cds.g5679.t1;Parent=g5679.t1 #PROT g5679.t1 g5679 MNVYCASGFVPADAAVSGHSATERHASAVASASPGSPQKIKSLSWEKMHLQVQPKRNLPLRAMVLVRRTLSSVLRDEEDRHEVPAGGAEDGDDLSMRDVEADQRLRSAGLAAIELDLDRMSLREEYPRTPSMPLRTKAPLALTPQIHRHPQATRCEEDALDGLPSSSTQSPSSSSVLSLPFLPHTHTPDVFAPISPLPSDSGADADDELGDDLEDDTPSQAVPDSDVDEAMMEGVFTVAHLPGGALPSAVCDAIDDAVAAAAVGGVAPLIAPMSFEDYCVVGSPSDRKRKMCRLVAEGDVAFVLSELSPKRRAALSPPPEHVLNSLNSNSGSAHSLSHNNVHEQPSVPSDAYL* # PASA_UPDATE: g11471.t1, single gene model update, valid-1, status:[pasa:asmbl_7509,status:12], valid-1 NODE_4662_length_1358_cov_32.3406 . gene 243 1282 . + . ID=g11471;Name=g11471.t1 NODE_4662_length_1358_cov_32.3406 . mRNA 243 1282 . + . ID=g11471.t1;Parent=g11471;Name=g11471.t1 NODE_4662_length_1358_cov_32.3406 . five_prime_UTR 243 368 . + . ID=g11471.t1.utr5p1;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . exon 243 540 . + . ID=g11471.t1.exon1;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . CDS 369 540 . + 0 ID=cds.g11471.t1;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . exon 796 884 . + . ID=g11471.t1.exon2;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . CDS 796 884 . + 2 ID=cds.g11471.t1;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . exon 1121 1282 . + . ID=g11471.t1.exon3;Parent=g11471.t1 NODE_4662_length_1358_cov_32.3406 . CDS 1121 1282 . + 0 ID=cds.g11471.t1;Parent=g11471.t1 #PROT g11471.t1 g11471 MDGLRKTSAGHRHKAEDKTALGVDADADADTRRGAPIPGLAGTDSNITIDGVPSAHIETIQMTVPGAHIEDGGVTISCRDLSYYFDKVIPPDNRKDKMLVAVGLQKPRTEAKFLLDNLNFSIRPKTMIALMGPSGACVPP* # PASA_UPDATE: g8162.t1, single gene model update, valid-1, status:[pasa:asmbl_5796,status:12], valid-1 NODE_3261_length_3890_cov_30.6275 . gene 510 3420 . + . ID=g8162;Name=g8162.t1 NODE_3261_length_3890_cov_30.6275 . mRNA 510 3420 . + . ID=g8162.t1;Parent=g8162;Name=g8162.t1 NODE_3261_length_3890_cov_30.6275 . five_prime_UTR 510 679 . + . ID=g8162.t1.utr5p1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 510 825 . + . ID=g8162.t1.exon1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 680 825 . + 0 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 1138 1279 . + . ID=g8162.t1.exon2;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 1138 1279 . + 1 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 1580 1717 . + . ID=g8162.t1.exon3;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 1580 1717 . + 0 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 1920 2050 . + . ID=g8162.t1.exon4;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 1920 2050 . + 0 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 2374 2410 . + . ID=g8162.t1.exon5;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 2374 2410 . + 1 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 2588 2672 . + . ID=g8162.t1.exon6;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 2588 2672 . + 0 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 2946 3064 . + . ID=g8162.t1.exon7;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 2946 3064 . + 2 ID=cds.g8162.t1;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . exon 3205 3420 . + . ID=g8162.t1.exon8;Parent=g8162.t1 NODE_3261_length_3890_cov_30.6275 . CDS 3205 3420 . + 0 ID=cds.g8162.t1;Parent=g8162.t1 #PROT g8162.t1 g8162 MAPRGSIALCALVVALVAHSAMGALPFIRIDNATRHFVDESGRTAIFHGVNVVYKLFPFYPSLDAFDFSNSLADSDMDDLAAWGFNVVRLGVLWPAVEPSRGQYNQTYIAEITRIIDGLEKRGIYTIVDNHQDVLHPRFCGEGIPDFAVHPTSGVGSFPFPNTAKLTKDASGIPAIADCLKHNFGLYYVSEEASSAYQAIYDNVDGLADAMADYWRVLARAFANRGAVLAYELWNEPWVGNYFHDPLLLAEPGHADKVNLQPLYEKLHAAIRPIDDKHILLYEPVQTDAIFHAGFTENIGGADYTDRAAYAYHIYCPAVDANGGKESEVACSSYSCH* # PASA_UPDATE: novel_model_13_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_4374,status:3], valid-1 NODE_2466_length_6170_cov_37.6542 . gene 4157 5848 . + . ID=novel_gene_13_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2466_length_6170_cov_37.6542 . mRNA 4157 5848 . + . ID=novel_model_13_5b6be656;Parent=novel_gene_13_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2466_length_6170_cov_37.6542 . five_prime_UTR 4157 4207 . + . ID=novel_model_13_5b6be656.utr5p1;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . exon 4157 4255 . + . ID=novel_model_13_5b6be656.exon1;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . CDS 4208 4255 . + 0 ID=cds.novel_model_13_5b6be656;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . exon 4544 4552 . + . ID=novel_model_13_5b6be656.exon2;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . CDS 4544 4552 . + 0 ID=cds.novel_model_13_5b6be656;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . exon 4727 4909 . + . ID=novel_model_13_5b6be656.exon3;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . CDS 4727 4909 . + 0 ID=cds.novel_model_13_5b6be656;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . exon 5122 5292 . + . ID=novel_model_13_5b6be656.exon4;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . CDS 5122 5292 . + 0 ID=cds.novel_model_13_5b6be656;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . exon 5731 5848 . + . ID=novel_model_13_5b6be656.exon5;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . CDS 5731 5781 . + 0 ID=cds.novel_model_13_5b6be656;Parent=novel_model_13_5b6be656 NODE_2466_length_6170_cov_37.6542 . three_prime_UTR 5782 5848 . + . ID=novel_model_13_5b6be656.utr3p1;Parent=novel_model_13_5b6be656 #PROT novel_model_13_5b6be656 novel_gene_13_5b6be656 MAERKIQSLLPVGLLLIGWFLLVVYTAKISYDANHPTNNNYDNTTYLYGVKNAGTFWFLWLILAFQLATVILSVMNKPIAASRLFVITIILLFQYFIITSRALTPCNSNHVVKTVGKTACQYNSLGMAGTIISFVGAVLGTVLIGTGVSEKFN* # PASA_UPDATE: g496.t1, single gene model update, valid-1, status:[pasa:asmbl_4373,status:12], valid-1 NODE_2466_length_6170_cov_37.6542 . gene 115 3575 . + . ID=g496;Name=g496.t1 NODE_2466_length_6170_cov_37.6542 . mRNA 115 3575 . + . ID=g496.t1;Parent=g496;Name=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 115 453 . + . ID=g496.t1.exon1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 115 453 . + 0 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 684 811 . + . ID=g496.t1.exon2;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 684 811 . + 0 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 1026 1112 . + . ID=g496.t1.exon3;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 1026 1112 . + 1 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 1351 1531 . + . ID=g496.t1.exon4;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 1351 1531 . + 1 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 1778 1898 . + . ID=g496.t1.exon5;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 1778 1898 . + 0 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . exon 2212 3575 . + . ID=g496.t1.exon6;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . CDS 2212 3260 . + 2 ID=cds.g496.t1;Parent=g496.t1 NODE_2466_length_6170_cov_37.6542 . three_prime_UTR 3261 3575 . + . ID=g496.t1.utr3p1;Parent=g496.t1 #PROT g496.t1 g496 MNNTTDEGIQAGNAPSQYVFSVEKTVQKFLAAGADITMFESSSHRTPVHIATSRGLFGVLSTFMKMTPGAAHQLTTMNQSCLHLAIASVVRKFDVRLMMARLLVEKGAEPNGVDAAGDTPLHLAVTTGQTDIVEFLLLIRAEPYHWDAAGRCPIHLATLQGRTDIVEKFCVARTDINVTTEKGETALILAIRGNFLDIVRLLAMQGARVSHRIPVSRESALHLAVLHNQPELISALIFSNPDIAKILDQNGESAEALCKRMMRYGDNDERAPIFNMLRVASKAQRTYAITNPQPLIPVQDFCVDPSSMQSTKSARPTLDMPTRAVRRASTGSATAPSLPPRNAVVSAPWPPVSGPAPPTQVDAPPAYENADTMASMRIRAATTGGMGPNNSNVTNSANTAAMRARPGMREMIASSTPPQQRQGSMDEPFYEEAISSPRTSAPPSTALPQRPNATTSATNNNATGGVGSPAFGAGRRAPSQVSLEMSGYSGSPAESVRPSPSSFGTDEERRKKRERIEKDRTDLEDLLSQIRAFAKLIEGGVVAETSAYYDVYQKIRRAVNLTAKLDHRLVSPGPKEIVVFLVDSFAKAVVSGHAVASPVSVGQPPLSDKGVALVRTHGGEGYTVFWRTLGDNWN* # ORIGINAL: g3825.t1 original gene structure, not modified by PASA NODE_1002_length_14887_cov_41.8015 AUGUSTUS gene 6364 6888 . - . ID=g3825;Name=g3825.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS mRNA 6364 6888 . - . ID=g3825.t1;Parent=g3825;Name=g3825.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 6364 6888 . - . ID=g3825.t1.exon1;Parent=g3825.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 6364 6888 . - 0 ID=cds.g3825.t1;Parent=g3825.t1 #PROT g3825.t1 g3825 MGMLHTKELIGVKEVDVDKMMGVWRVVSVIPTPFEKGAFNPVEKYTWNAKREVVDVNFSFNQGSLDGPVKEYPQTIYTGSFPKAAGKWLASPFWPVKLDYTIMDVDAEYSWVVVGHSSRNYLWIMSRKTTIDKAVLDRAIETGKANGFDVTKLEYPVHSPADDSAVAPDQSSPL* # ORIGINAL: g3828.t1 original gene structure, not modified by PASA NODE_1002_length_14887_cov_41.8015 AUGUSTUS gene 13544 14736 . + . ID=g3828;Name=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS mRNA 13544 14736 . + . ID=g3828.t1;Parent=g3828;Name=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 13544 13613 . + . ID=g3828.t1.exon1;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 13544 13613 . + 0 ID=cds.g3828.t1;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 13862 14000 . + . ID=g3828.t1.exon2;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 13862 14000 . + 2 ID=cds.g3828.t1;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 14232 14471 . + . ID=g3828.t1.exon3;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 14232 14471 . + 1 ID=cds.g3828.t1;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 14724 14736 . + . ID=g3828.t1.exon4;Parent=g3828.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 14724 14736 . + 1 ID=cds.g3828.t1;Parent=g3828.t1 #PROT g3828.t1 g3828 MVEGHQPRAVTCTAPVNIAVIKYWGKRDEDLILPVNSSLSATLCTEQLKTTTTVMASRSFTADRIWLNGKEEDISNPRLVNCLREIRRRAKALGTAPDIDDSARIHICSNNNFPTAAGLASSAAGYACLVYALAKLFGVADNTDISALARRSH* # ORIGINAL: g3824.t1 original gene structure, not modified by PASA NODE_1002_length_14887_cov_41.8015 AUGUSTUS gene 325 5402 . + . ID=g3824;Name=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS mRNA 325 5402 . + . ID=g3824.t1;Parent=g3824;Name=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 325 419 . + . ID=g3824.t1.exon1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 325 419 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 561 727 . + . ID=g3824.t1.exon2;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 561 727 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 1005 1120 . + . ID=g3824.t1.exon3;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 1005 1120 . + 2 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 1341 1514 . + . ID=g3824.t1.exon4;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 1341 1514 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 1773 1925 . + . ID=g3824.t1.exon5;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 1773 1925 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 2318 2436 . + . ID=g3824.t1.exon6;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 2318 2436 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 2784 3125 . + . ID=g3824.t1.exon7;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 2784 3125 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 3427 3612 . + . ID=g3824.t1.exon8;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 3427 3612 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 3828 4094 . + . ID=g3824.t1.exon9;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 3828 4094 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 4271 4403 . + . ID=g3824.t1.exon10;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 4271 4403 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 4617 4747 . + . ID=g3824.t1.exon11;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 4617 4747 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 4921 5038 . + . ID=g3824.t1.exon12;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 4921 5038 . + 1 ID=cds.g3824.t1;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 5355 5402 . + . ID=g3824.t1.exon13;Parent=g3824.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 5355 5402 . + 0 ID=cds.g3824.t1;Parent=g3824.t1 #PROT g3824.t1 g3824 METTAAFSPPHINNLLATDSWLQNYVAPITRRYSRYQALKSSIERHEGSLLEFARGYDKMGFTHANGAIVYREWVPTAVAVHLIGDFNGWNRTSHPLRKNSYGVWEIVLPNKPGGLPAIQNGTRVKVAIQTQEGEHIDRISPWIKKVVQDPTTNIYDAIYYNPATPYQWQHTRPSRPHSLRIYEAHVGISSAEGKVASYRHFATDIIPRIAKQGYNAIQLMAIMEHAYYGSFGYQVTSFFAASSRYGEPDELKLLVDTAHHYGLVVLLDVVHSHACKNTLDGLNQFDGTDHCYFHGGGKGHHSLWDSRLFNYGHWEVLRFLLSNLRWWIDEYHFDGFRFDGVTSMLYVHHGIGTGFSGNYDEYFGETVDDEAVAYLMLANDLIHTLNKNMITIGEDVSGMPALCRPVAEGGIGFDYRLGMAIPDKWIELLKESRDEDWNMGNIVHTLTNRRHGERTIAYAESHDQALVGDKTIAFWLMDKEMYTNMSVLTPLTPVVDRGMALHKMIRLLTHALGGEGWLNFEGNEFGHPEWLDFPREGNNGSYHYARRQWNLIEDKLLRYKFLNEFDRDMNALDAAFNWLGSTQAFVSLKHEGDKLIVFERAGLVFAFNFHATSSFVDYRIGVHVPGRYRIVLCTDSAKYGGHGRIDMNCESFTHPDAWHDRANSMMVYLPSRCGVVWRKDD* # ORIGINAL: g3827.t1 original gene structure, not modified by PASA NODE_1002_length_14887_cov_41.8015 AUGUSTUS gene 8946 12874 . - . ID=g3827;Name=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS mRNA 8946 12874 . - . ID=g3827.t1;Parent=g3827;Name=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 12725 12874 . - . ID=g3827.t1.exon1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 12725 12874 . - 0 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 12411 12561 . - . ID=g3827.t1.exon2;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 12411 12561 . - 0 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 12071 12188 . - . ID=g3827.t1.exon3;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 12071 12188 . - 2 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 11113 11936 . - . ID=g3827.t1.exon4;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 11113 11936 . - 1 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 10580 10747 . - . ID=g3827.t1.exon5;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 10580 10747 . - 2 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 9347 10217 . - . ID=g3827.t1.exon6;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 9347 10217 . - 2 ID=cds.g3827.t1;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 8946 9090 . - . ID=g3827.t1.exon7;Parent=g3827.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 8946 9090 . - 1 ID=cds.g3827.t1;Parent=g3827.t1 #PROT g3827.t1 g3827 MVPSETGVRVLFLYGSQSGNAEAIATDLCASAVEKGYASVVHCLDKFDKEFKLPNEPIVVFVVATHFDGDPPDNTAAFWRYLKRKTHASDFLRGMSYAVLGLGDTNYTNFCAMGRNLDKRLQELGAAPFYALGKADDAVGLEKVVEPWIGGIWGSLARAADKSREAKSVPSDAISDNGPAPKANSISEKAVAEAASSETVDAIVKSALDGLSIANASETSPNSDSASSLNRERVSVADDVMLIASDVATASESPAAVAAKDEKKAAPVPPAALPRLPAPFLALNKVDADETRERVDPACGLWRKGFVQSRLVGAVRLTRKNAARTSLEVTVEAPLSATIAVSHEYGGGDAVVDQPATGAVAATNASGLAIVPEPGDAIAVTCANDDREVAAVLFLVGVNPSAVYEGVLLQGAAKSAAVPHYLTSPISACDILKYHCDLRAVPKKTFFRALAEYAADDDDKHRLLLLSSREGAAMFDALLASGRYTLLDILQLNPSVKPPLSRLVELLPALAPRYYSVSRLPRVRKATSTITLSFAFNVLSFDDVRVDSVQPFTRKGVCTGFIESACNSLVSSTDMPNYPDSPNQVNAIDNTRVTPFALYIFPRSTAHGHPFRAPRDPATPVIMVGPGTGVAPFVGFLEERSASLSLRQQQQHGLLLPPPSPLSECDNAPAATPRAALGEWWLFFGCRDADHFIFEEDLAAFVADGTLSRLITCQSRLSPEAGDHGKDDASVLRYVQHGIEKHAAELCSLLMERGAHIYVCGDARNMAVDVHRALLSMLQAHGQLSESAADAFLKTLAAEGRYLRDVWA* # ORIGINAL: g3826.t1 original gene structure, not modified by PASA NODE_1002_length_14887_cov_41.8015 AUGUSTUS gene 7421 8652 . + . ID=g3826;Name=g3826.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS mRNA 7421 8652 . + . ID=g3826.t1;Parent=g3826;Name=g3826.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 7421 7610 . + . ID=g3826.t1.exon1;Parent=g3826.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 7421 7610 . + 0 ID=cds.g3826.t1;Parent=g3826.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS exon 7808 8652 . + . ID=g3826.t1.exon2;Parent=g3826.t1 NODE_1002_length_14887_cov_41.8015 AUGUSTUS CDS 7808 8652 . + 2 ID=cds.g3826.t1;Parent=g3826.t1 #PROT g3826.t1 g3826 MERKRAKKTDYEADYVAGDWESILAGKDDPAAMFYVGLYYDSMKHDFVLARDAFQMAMDSGDTHDFFGGKLQEDIIFDESHPLAAFVVAHPFCERIPCSGTADVDSLSRRAGLLKHAADGGLVVALLAYVSFLARRDWIQIDTPMIVIRKFKDELERCVVYPFPEACCLFAMILPKPRKVELLKRAVDMEYYPAFLQCLCTIDKWGPEEVSPWQCAQASGDAKSLHLASYLYSMGAKVGEFEIAQDVVKAESLLVRFLSDDDNLHRHGAIHRLYSLYTNHFCSRPDWLVKLTALKKMLKKGIYDDGCDRCDFLLSEWQGPYCNKIPVVWLEDDTEADIRKHRNR* # ORIGINAL: g927.t1 original gene structure, not modified by PASA NODE_10014_length_316_cov_85.1826 AUGUSTUS gene 1 285 . - . ID=g927;Name=g927.t1 NODE_10014_length_316_cov_85.1826 AUGUSTUS mRNA 1 285 . - . ID=g927.t1;Parent=g927;Name=g927.t1 NODE_10014_length_316_cov_85.1826 AUGUSTUS exon 1 285 . - . ID=g927.t1.exon1;Parent=g927.t1 NODE_10014_length_316_cov_85.1826 AUGUSTUS CDS 1 285 . - 0 ID=cds.g927.t1;Parent=g927.t1 #PROT g927.t1 g927 MIFLVTDADPHMAGDGTKAGLYKRNTATCYVPDSTTDAAGIIAAMDAASITQDYPSIGQLADVLLSSNVFPIFAYPRSTVPASVDTFENINDNVF # PASA_UPDATE: g9408.t1, single gene model update, valid-1, status:[pasa:asmbl_5164,status:12], valid-1 NODE_2875_length_4872_cov_40.0492 . gene 109 2957 . + . ID=g9408;Name=g9408.t1 NODE_2875_length_4872_cov_40.0492 . mRNA 109 2957 . + . ID=g9408.t1;Parent=g9408;Name=g9408.t1 NODE_2875_length_4872_cov_40.0492 . five_prime_UTR 109 110 . + . ID=g9408.t1.utr5p1;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . exon 109 1450 . + . ID=g9408.t1.exon1;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . CDS 111 1450 . + 0 ID=cds.g9408.t1;Parent=g9408.t1;5_prime_partial=true NODE_2875_length_4872_cov_40.0492 . exon 1711 2302 . + . ID=g9408.t1.exon2;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . CDS 1711 2302 . + 1 ID=cds.g9408.t1;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . exon 2562 2957 . + . ID=g9408.t1.exon3;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . CDS 2562 2777 . + 0 ID=cds.g9408.t1;Parent=g9408.t1 NODE_2875_length_4872_cov_40.0492 . three_prime_UTR 2778 2957 . + . ID=g9408.t1.utr3p1;Parent=g9408.t1 #PROT g9408.t1 g9408 DCALLKNPSDAGLPFIGRITCAYELRTPRQRKAAGATKRRKVGPGPAREGDGMEVTCWVTVRWYYRAEDTFMTAAQRRQHDSAEVFASTATDENEIDSIERKCEIVDSDEYADRTRGGRPRRLFYCTRAYDVSKNAYSDATTVEFRGVNTDSDADSDADSDADSDVDSDADSDVGSSGTNDSKTGDSDDGTSRRKTSSRKQSPTDLPTKRGRPKGSKNKPKADTPSAAGDVGGDATKGESNGSNKRKKRPHAAGYADANANGASDAPRRRRAGPSVPDIPQRVATALAQQRTANVGDEPVGGAAALERARERLHVSAVPSALPCREDEFSDIWAFVADKLAAGTGGCVYVSGVPGTGKTATVRGVVAALEGEVAEGHVPPFQFVELNGMRLSEPQQAYAELWAALVGSRVTPSHAVTLLEKRFSTPSPRRQCVVLLLDELDLLVTRRQDVLYNFFDWPNRAHSRLVVIAIANTMDLPERLLANRVASRLGPTRISFEPYSYQQLEKIVASRLVGLDAFDLTAVEFCARKVASVSGDARRALDICRRATEIAGGGGGTRDDEERGDGRGKAGAHKNAHKDTNKDGASHRVARAVTIADIEAALAEMFASPAVVALRNASLHERLFMCALLAEFRSSGVEEAPFGKVAARHVTICRLQGLSPPTTSELAAACGRLGSARLVLAEGGDRDLFQRIRLNITHDDASFALRDDPLTRRLA* # PASA_UPDATE: g9409.t1, single gene model update, valid-1, status:[pasa:asmbl_5165,status:3], valid-1 NODE_2875_length_4872_cov_40.0492 . gene 3015 4356 . - . ID=g9409;Name=g9409.t1 NODE_2875_length_4872_cov_40.0492 . mRNA 3015 4356 . - . ID=g9409.t1;Parent=g9409;Name=g9409.t1 NODE_2875_length_4872_cov_40.0492 . five_prime_UTR 4309 4356 . - . ID=g9409.t1.utr5p1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . exon 4290 4356 . - . ID=g9409.t1.exon1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . CDS 4290 4308 . - 0 ID=cds.g9409.t1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . exon 3551 3917 . - . ID=g9409.t1.exon2;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . CDS 3551 3917 . - 2 ID=cds.g9409.t1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . exon 3257 3326 . - . ID=g9409.t1.exon3;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . CDS 3257 3326 . - 1 ID=cds.g9409.t1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . exon 3015 3131 . - . ID=g9409.t1.exon4;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . CDS 3117 3131 . - 0 ID=cds.g9409.t1;Parent=g9409.t1 NODE_2875_length_4872_cov_40.0492 . three_prime_UTR 3015 3116 . - . ID=g9409.t1.utr3p1;Parent=g9409.t1 #PROT g9409.t1 g9409 MAPAKKETAKPTPKAAAKTDAKKAAKVVAKGANAIKHRKIRTSVTFHRPKTLRLTRQPRYPRRSAPRPNKLDQFTIVKHPLTTESAMKKIEDNNTLVFIVDVRSNKAQIKDAVKRLYDIQVAKVNTLVRPDGQKKAYVRLHADVDALDVANKIGII* # ORIGINAL: g12402.t1 original gene structure, not modified by PASA NODE_1316_length_12177_cov_52.6513 AUGUSTUS gene 231 7021 . - . ID=g12402;Name=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS mRNA 231 7021 . - . ID=g12402.t1;Parent=g12402;Name=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 6752 7021 . - . ID=g12402.t1.exon1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 6752 7021 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 6504 6608 . - . ID=g12402.t1.exon2;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 6504 6608 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 6211 6337 . - . ID=g12402.t1.exon3;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 6211 6337 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 5770 5837 . - . ID=g12402.t1.exon4;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 5770 5837 . - 2 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 5416 5541 . - . ID=g12402.t1.exon5;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 5416 5541 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 5066 5222 . - . ID=g12402.t1.exon6;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 5066 5222 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 4623 4738 . - . ID=g12402.t1.exon7;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 4623 4738 . - 2 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 4193 4452 . - . ID=g12402.t1.exon8;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 4193 4452 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 3883 3945 . - . ID=g12402.t1.exon9;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 3883 3945 . - 1 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 3561 3621 . - . ID=g12402.t1.exon10;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 3561 3621 . - 1 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 3051 3385 . - . ID=g12402.t1.exon11;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 3051 3385 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 2643 2850 . - . ID=g12402.t1.exon12;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 2643 2850 . - 1 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 2240 2339 . - . ID=g12402.t1.exon13;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 2240 2339 . - 0 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 882 2091 . - . ID=g12402.t1.exon14;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 882 2091 . - 2 ID=cds.g12402.t1;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 231 666 . - . ID=g12402.t1.exon15;Parent=g12402.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 231 666 . - 1 ID=cds.g12402.t1;Parent=g12402.t1 #PROT g12402.t1 g12402 MAAATAASRPTAAASRPGAIASAESLSHTSAEMRQSFFTNMLLLGFEPVKAEERYRIPFHKNMFAQPNSKGMEVVLHFLLTRLDKARAEKDFKGCWPILDKKQESQFRKVVMGWLALIEQESKSHFPRIAASILLSAHGDRFYSLVFHLSTHVLQYALTAEYGRYNQMPHIPEFDPKNPSSADIIVRALKMHVINQRRVFLENAQKTAAIHAEWRQASSTLTRSCRAATKAKRDVERALHDEEERSASAPSSGVAAIERSAKLREVRELWREISRIVESGADGRVSIESVINKTANAHRLDAANIALTVPNLVLKLWSSEISQGKVQQTHANGRLNLLSLVQLFNLSLRTVLTSLSDTTLSEGLLAGPSAALEKRVEAHAALASGADVLREALEVMVKETEQSIVVLRERSKSLVSRPALRSTAAAATPSSKSLYALSAPSPAASFSPMSQGPFSLASIPSPAQSLGPAPAKSVSNPSTHKPLSPAAAPVAAAEFEDGGRDFSASILSPIAEPNLISPMHDDISTATTSNATTAKRTAPAENRLSSIPVGRESLAGRKSMRGGTASRPQQQRAPSAASHAKPPLSASSAKAVPRRVTKTSSNVSALSGDPATPVSHGPVSAKAKSLDILAEQIVSRAMGDMSLSDSPTTQSAAAPHFVADTLKALDTKAFQSRDLVPRTPLSQHTIAHSRTDRKSTASIESTPNEENENELPQQQTHRDHEHEHEHDGRLGEDHVSVAGQASLHTSASAVRHVSFSSSNSPMADADDDTHTSPSAAGAPLASLISFSPFVPAVRAGSKQEAKATIGEDDGQNDEDDIRAAQTQRSVDLLAAASESPVVAWTALNRSTASAADDSFMLAQSPLCAGTPAARREVASKSASSTSRGRNAVAKPHKSLSPFAAAAAMVAREQAEEEEEEKRAGVVGDDDCAATATFGARTTGSTGTRRLVAWNDESLVHWDAEQDGDASGADDGEGLDGSITFAPYHRQEDAEEENADMDEEENIGDVEDCLEGDDNRGEYSLDGYGVHDDSTHSPDHQPLTSSFRHSDVADEISASADTPDGLSTTAASRGFEYVNSADRGDSPLTGDTSSIHAPSPLENARRTLFVASSPEDSSTVHSSPSNNDTSSASSASVTRNRFARAYVATPSRRSAGASRGVSIDSPMGMQCADDSMADGGSLAAVVVISSYVVVVVIVAVVVVVAGAVAFCAVRVCMS* # ORIGINAL: g12403.t1 original gene structure, not modified by PASA NODE_1316_length_12177_cov_52.6513 AUGUSTUS gene 7774 9430 . + . ID=g12403;Name=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS mRNA 7774 9430 . + . ID=g12403.t1;Parent=g12403;Name=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 7774 7863 . + . ID=g12403.t1.exon1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 7774 7863 . + 0 ID=cds.g12403.t1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 7979 8096 . + . ID=g12403.t1.exon2;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 7979 8096 . + 0 ID=cds.g12403.t1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 8279 8433 . + . ID=g12403.t1.exon3;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 8279 8433 . + 2 ID=cds.g12403.t1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 8684 8788 . + . ID=g12403.t1.exon4;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 8684 8788 . + 0 ID=cds.g12403.t1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 9004 9126 . + . ID=g12403.t1.exon5;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 9004 9126 . + 0 ID=cds.g12403.t1;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 9332 9430 . + . ID=g12403.t1.exon6;Parent=g12403.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 9332 9430 . + 0 ID=cds.g12403.t1;Parent=g12403.t1 #PROT g12403.t1 g12403 MAEYDLTPVIGGFLDRHLVFPLLEFLQQNNLYTEKEILQGKLDLLSETNLVDFAMDIYRGLNQTEDVPEGLVEKRQVVVARLQQLQNDIQPIIRIFENQDVLKELRQDKMWNLQYLETNFEFEVGMLDTLYDYAKFQYDCGNYAGAAEYLYHYCVLSTDAEKCFSAMWGKFAAEILMHNWDAALEDMTRLKEIIDNKTFATHLQQMYTGIRHPRKFTHFLQRAVITNWD* # ORIGINAL: g12404.t1 original gene structure, not modified by PASA NODE_1316_length_12177_cov_52.6513 AUGUSTUS gene 9444 11144 . - . ID=g12404;Name=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS mRNA 9444 11144 . - . ID=g12404.t1;Parent=g12404;Name=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 11018 11144 . - . ID=g12404.t1.exon1;Parent=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 11018 11144 . - 0 ID=cds.g12404.t1;Parent=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 10201 10853 . - . ID=g12404.t1.exon2;Parent=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 10201 10853 . - 2 ID=cds.g12404.t1;Parent=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS exon 9444 9971 . - . ID=g12404.t1.exon3;Parent=g12404.t1 NODE_1316_length_12177_cov_52.6513 AUGUSTUS CDS 9444 9971 . - 0 ID=cds.g12404.t1;Parent=g12404.t1 #PROT g12404.t1 g12404 MLPTRCSVRLNSSRDIAVGVALCLLLTIASAAVVERPDRSESENGSVVPFGVTEPNCDSTWREGYTHTIRWDPDIFGSANARVNIELRRTGDETIATKRRRCGVEAPSTRIHRIAYRTPNDGTLLWTVPDGIPETNELFVRVWAECEGQECPGYERDRRGAESDKKDGYGHSGHFQGKLRGPTVIHEDSALFVITSRPLIWKVAVLVYRHTRLSYAGPQLYDPPLVADITDAELVNVREGIAGGIDFGVNFFAAPNVQFAVTYFFPTNPIEIVTEYDGTDTYFVQETNIVQDIKKFAPEGTFDTIITVWKPPTGITPAPQGIFFQSGTLFTIASYMVYHVPVPSSFVDFTTQLLDQVAFWVRHHGWPVPSSTEKDVYGYNDLYDFVRDVFNGKVRDPTSNELVGLTEAAINSAGSPSHPYPQPVCGLAESESAQP* # ORIGINAL: g2917.t1 original gene structure, not modified by PASA NODE_5284_length_928_cov_31.4138_potentialcontaminant AUGUSTUS gene 2 928 . + . ID=g2917;Name=g2917.t1 NODE_5284_length_928_cov_31.4138_potentialcontaminant AUGUSTUS mRNA 2 928 . + . ID=g2917.t1;Parent=g2917;Name=g2917.t1 NODE_5284_length_928_cov_31.4138_potentialcontaminant AUGUSTUS exon 2 928 . + . ID=g2917.t1.exon1;Parent=g2917.t1 NODE_5284_length_928_cov_31.4138_potentialcontaminant AUGUSTUS CDS 2 928 . + 0 ID=cds.g2917.t1;Parent=g2917.t1 #PROT g2917.t1 g2917 STCETNVGARRVEVRSLDAALGSPSSSASERVGLLTFSSGAIDYRALPVATSDSINVVVAVVASIASVLGVMIVVMLLVFCFCLGRSHAHAPKDSTVKFSLVFTDIQSSTRLWVEDPEEMGRALDIHHRLIRELIRKHKGYEVKTIGDSFMVAFKNADDAVRMSYELQHVFHRCEKFSPSIDRAYLAFDKQMLPSNESERLTCNLPPDVYALMWSGVRVRIGIHTAFGEIKRDEVTQAYDYYGLVTNTAARVEAVSHGGQVCLTEGTLHELREVHLDTFEGALPIEVLNAQSSGPSTALWLGSVELRGL # ORIGINAL: g2776.t1 original gene structure, not modified by PASA NODE_6732_length_517_cov_82.7783_potentialcontaminant AUGUSTUS gene 1 401 . - . ID=g2776;Name=g2776.t1 NODE_6732_length_517_cov_82.7783_potentialcontaminant AUGUSTUS mRNA 1 401 . - . ID=g2776.t1;Parent=g2776;Name=g2776.t1 NODE_6732_length_517_cov_82.7783_potentialcontaminant AUGUSTUS exon 1 401 . - . ID=g2776.t1.exon1;Parent=g2776.t1 NODE_6732_length_517_cov_82.7783_potentialcontaminant AUGUSTUS CDS 1 401 . - 1 ID=cds.g2776.t1;Parent=g2776.t1 #PROT g2776.t1 g2776 AQPAGEIDDIETANAFAALAIEEVPGVARGVTAQETLDKAAAVDNRQRALFFCTLNAEGLKRKASELAHTLHDRTDGFRADIIAIQETLGKPDDDFVSISGYGGVRRNRSEQLGTKGSGGVALYIRKGIRWTA # ORIGINAL: g3056.t1 original gene structure, not modified by PASA NODE_6034_length_655_cov_61.3672_potentialcontaminant AUGUSTUS gene 2 655 . + . ID=g3056;Name=g3056.t1 NODE_6034_length_655_cov_61.3672_potentialcontaminant AUGUSTUS mRNA 2 655 . + . ID=g3056.t1;Parent=g3056;Name=g3056.t1 NODE_6034_length_655_cov_61.3672_potentialcontaminant AUGUSTUS exon 2 655 . + . ID=g3056.t1.exon1;Parent=g3056.t1 NODE_6034_length_655_cov_61.3672_potentialcontaminant AUGUSTUS CDS 2 655 . + 2 ID=cds.g3056.t1;Parent=g3056.t1 #PROT g3056.t1 g3056 TAVDDANGHLSAAVTAGRGGRTHSMESRERSDGDGRAPSRTGTAAWEQTETAAYSGYGSPQVHGHDAHDARSLVNTSTPNAESANGGQNDDASVAVAKLLRELGVHIDDGVDDSAPKLDFGIALSQEEATGGQIASESLNSSRNGHAFTRELMLESIGLGIHADDTMHAATIGGGGILDAAMFGGGSKKKTGASALRKTYLGPFLVALGIIPMRSRN # ORIGINAL: g7262.t1 original gene structure, not modified by PASA NODE_2181_length_7383_cov_80.3792 AUGUSTUS gene 175 2946 . - . ID=g7262;Name=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS mRNA 175 2946 . - . ID=g7262.t1;Parent=g7262;Name=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 1960 2946 . - . ID=g7262.t1.exon1;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 1960 2946 . - 0 ID=cds.g7262.t1;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 1398 1562 . - . ID=g7262.t1.exon2;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 1398 1562 . - 0 ID=cds.g7262.t1;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 1106 1171 . - . ID=g7262.t1.exon3;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 1106 1171 . - 0 ID=cds.g7262.t1;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 700 873 . - . ID=g7262.t1.exon4;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 700 873 . - 0 ID=cds.g7262.t1;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 175 420 . - . ID=g7262.t1.exon5;Parent=g7262.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 175 420 . - 0 ID=cds.g7262.t1;Parent=g7262.t1 #PROT g7262.t1 g7262 MAGALARASALADRIADAPEKFLTPDGALAAEVLHVTKSLFDLLKRREPKAASCPLSELLVAGFDRDQVWEQIQLQNKPLFAHVTKKSDALVARPDAVELLREASSTRPSSEKGKKGTDAANGGKLGKKSAVEEELSSDGDDNESEHDDDVHAMGEGEDSEAEADDGDEEGGDDAMDVDEEEDEDEEDDEDEEEEEEEEEEEGEMMYSDFFDGPPGDVDVDLDADDFGAGDRASGKTNNKRRRDEDEDENDAEGANDDNERDGDEEGDENGDGEDGAVLKKGLFEKEDSSDASETPKSTFEKRNEKMRKTIEELEHANVSDKKWQLTGEVLSKARPMNSLLEEDLDFERTTKPAPVVTEETTLSLEDMIRQRIKNGVFDDVERKYDEDDHPKRRKDDIELDGEKSKVGLAEIYESEYVRQANKSVTAAEEKLSKEHEEIKGIFASLCAKLDALSNFHFTPKPIKEDVAIVTNVPALQLEEKIPVNVADTTTLAPEEVFAKSKGIEKGTTERTKTDKLRERRKKKAQKHTERVEREKKEERLAAQGK # ORIGINAL: g7263.t1 original gene structure, not modified by PASA NODE_2181_length_7383_cov_80.3792 AUGUSTUS gene 3484 4818 . + . ID=g7263;Name=g7263.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS mRNA 3484 4818 . + . ID=g7263.t1;Parent=g7263;Name=g7263.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 3484 4377 . + . ID=g7263.t1.exon1;Parent=g7263.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 3484 4377 . + 0 ID=cds.g7263.t1;Parent=g7263.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS exon 4702 4818 . + . ID=g7263.t1.exon2;Parent=g7263.t1 NODE_2181_length_7383_cov_80.3792 AUGUSTUS CDS 4702 4818 . + 0 ID=cds.g7263.t1;Parent=g7263.t1 #PROT g7263.t1 g7263 MTDHVDGATSPAKRKRNDSEDEGELPEQDGGHPNKRQEVEPASTEATAESVTESVTENVTMADRSGSDGTRENKRGNGKEDDREKERERDRDRDRHLDRDDRSARDKARDRGRSRSRSRERERERERERERDRERGRSSRGDRDRDGGRDGGRDRDREREREREREKEREREKERERERERDRARDRDRDGDGRRGERGERGGRDRSRERGRGRDEDRSRDVDVRERDREREREKEREARASKVAVAVESVKDKSVEAVTESVAVAVDESEKMEVEEEIDEEEAMRKLLGFTGFDSTKGKKVDGTNVSAANIKHVRRYRQYMNRKGGFNRPLDAIK* # PASA_UPDATE: g7264.t1, single gene model update, valid-1, status:[pasa:asmbl_3705,status:3], valid-1 NODE_2181_length_7383_cov_80.3792 . gene 5069 7180 . - . ID=g7264;Name=g7264.t1 NODE_2181_length_7383_cov_80.3792 . mRNA 5069 7180 . - . ID=g7264.t1;Parent=g7264;Name=g7264.t1 NODE_2181_length_7383_cov_80.3792 . five_prime_UTR 6883 7180 . - . ID=g7264.t1.utr5p1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . exon 6507 7180 . - . ID=g7264.t1.exon1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . CDS 6507 6882 . - 0 ID=cds.g7264.t1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . exon 6081 6346 . - . ID=g7264.t1.exon2;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . CDS 6081 6346 . - 2 ID=cds.g7264.t1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . exon 5697 5783 . - . ID=g7264.t1.exon3;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . CDS 5697 5783 . - 0 ID=cds.g7264.t1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . exon 5069 5349 . - . ID=g7264.t1.exon4;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . CDS 5227 5349 . - 0 ID=cds.g7264.t1;Parent=g7264.t1 NODE_2181_length_7383_cov_80.3792 . three_prime_UTR 5069 5226 . - . ID=g7264.t1.utr3p1;Parent=g7264.t1 #PROT g7264.t1 g7264 MSYHVPLVQSESDIPVTGSAKLSVHKLAALSRVEQPDERMLMGPRPSWLHAAARDHIASNGNGTLVLVHGYCSSTNPFAAVQDDFTNAAYFLNPDANMRNDEFAIKIAEFIKDIGATAFMAHSQGGLAILHLHNYYWSGADIHTDPNVNSEGAILQSVGSPYLGTGIAGSAAAIGAIFGVGCGANEDLTYDGAELWLTGITATTRDRLTFYTTQYASGSYCNIITQLVLSKPNDGVVEFEREQLAGAHSGGHMEGECHSAGMKYPPQCEDHSRNKIINDSAAR* # PASA_UPDATE: g9256.t1, single gene model update, valid-1, status:[pasa:asmbl_6787,status:3], valid-1 NODE_397_length_24798_cov_39.8606 . gene 11367 13224 . - . ID=g9256;Name=g9256.t1 NODE_397_length_24798_cov_39.8606 . mRNA 11367 13224 . - . ID=g9256.t1;Parent=g9256;Name=g9256.t1 NODE_397_length_24798_cov_39.8606 . five_prime_UTR 12918 13224 . - . ID=g9256.t1.utr5p1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . exon 12828 13224 . - . ID=g9256.t1.exon1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . CDS 12828 12917 . - 0 ID=cds.g9256.t1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . exon 12483 12587 . - . ID=g9256.t1.exon2;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . CDS 12483 12587 . - 0 ID=cds.g9256.t1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . exon 12113 12300 . - . ID=g9256.t1.exon3;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . CDS 12113 12300 . - 0 ID=cds.g9256.t1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . exon 11367 11835 . - . ID=g9256.t1.exon4;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . CDS 11610 11835 . - 1 ID=cds.g9256.t1;Parent=g9256.t1 NODE_397_length_24798_cov_39.8606 . three_prime_UTR 11367 11609 . - . ID=g9256.t1.utr3p1;Parent=g9256.t1 #PROT g9256.t1 g9256 MDTLGAPAASAGAPTPGSSPLDRFIVPLQQRYQKLLDDTTPHVTARWAFTAVLALLYALRVYLIEGWYIVTYALGIYLLNLFIAFLSPRIDPAMDNDNDEEEDGPALPTKADEEFRPFIRRLPEFKFWHGTTKAIIVATVLTFFSLFNIPVFWPILVMYFFMLFAITMKRQIRHMIKYKYLPWTSGKRRYKGKDEGTKTLAK* # PASA_UPDATE: g9258.t1, single gene model update, valid-1, status:[pasa:asmbl_6792,status:12], valid-1 NODE_397_length_24798_cov_39.8606 . gene 17887 21748 . + . ID=g9258;Name=g9258.t1 NODE_397_length_24798_cov_39.8606 . mRNA 17887 21748 . + . ID=g9258.t1;Parent=g9258;Name=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 17887 18050 . + . ID=g9258.t1.exon1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 17887 18050 . + 0 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 18309 18367 . + . ID=g9258.t1.exon2;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 18309 18367 . + 1 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 18814 18887 . + . ID=g9258.t1.exon3;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 18814 18887 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 19115 19529 . + . ID=g9258.t1.exon4;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 19115 19529 . + 0 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 19753 19833 . + . ID=g9258.t1.exon5;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 19753 19833 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 20034 20126 . + . ID=g9258.t1.exon6;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 20034 20126 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 20386 20463 . + . ID=g9258.t1.exon7;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 20386 20463 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 20669 20809 . + . ID=g9258.t1.exon8;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 20669 20809 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 21108 21216 . + . ID=g9258.t1.exon9;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 21108 21216 . + 2 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . exon 21485 21748 . + . ID=g9258.t1.exon10;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . CDS 21485 21665 . + 1 ID=cds.g9258.t1;Parent=g9258.t1 NODE_397_length_24798_cov_39.8606 . three_prime_UTR 21666 21748 . + . ID=g9258.t1.utr3p1;Parent=g9258.t1 #PROT g9258.t1 g9258 MLIVQWALTPRFSHDSYFGRASREVAETALDPAPVGCFLVRESERRPGEYALSMRLSSGIKHFRLYYGDGQHFVGDIKFPTLVELVSDGVRTYEMQRQKRTASTSPVSMSASTPALEATSGASLSQPQPQSQPQSQPQRTTPVLSVSTGEDSSASTSLISPRATSDAIAMPSSPRSAAVAGAGFGSVGSVSPASSPVFARKVVKAHRFDIHNYKNPTWCDECGDFLWGLRGQGFKCQDCGTNAHKQCSTETATSCTPGRHKIKKVFGADLTLVLAAHQSEVPHIVDKCIVEVQSRGILEQGIYRISGSSSTIRALVDELNTGREDVSVNFEAYPDVHVVAGVLKMYLRQLPDPVISTDAYPAFIASVRDNEKDEDKQLVALSAQVASLAPAHFNVLRRIILHLADIAAHADENRMPATNLAVVFGPTLMRASDEAGMPLVADTLVQNKAVQLLIENADTIFPSA* # ORIGINAL: g9252.t1 original gene structure, not modified by PASA NODE_397_length_24798_cov_39.8606 AUGUSTUS gene 200 2849 . - . ID=g9252;Name=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS mRNA 200 2849 . - . ID=g9252.t1;Parent=g9252;Name=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 2796 2849 . - . ID=g9252.t1.exon1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 2796 2849 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 2419 2556 . - . ID=g9252.t1.exon2;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 2419 2556 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 1922 2125 . - . ID=g9252.t1.exon3;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 1922 2125 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 1646 1798 . - . ID=g9252.t1.exon4;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 1646 1798 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 1351 1477 . - . ID=g9252.t1.exon5;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 1351 1477 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 932 1146 . - . ID=g9252.t1.exon6;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 932 1146 . - 2 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 690 785 . - . ID=g9252.t1.exon7;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 690 785 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 483 541 . - . ID=g9252.t1.exon8;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 483 541 . - 0 ID=cds.g9252.t1;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 200 353 . - . ID=g9252.t1.exon9;Parent=g9252.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 200 353 . - 1 ID=cds.g9252.t1;Parent=g9252.t1 #PROT g9252.t1 g9252 MAELLAAAEPELNGVIAEYLLFGHYPGTLNAFESECRTKGKPVGQYANKSLGDARETVKKAHLQVLCGNGPPQNEIMATLEEGDHAGFFALWDRNLPATLRKKDLTCQKLEFSANIYFAIFPLLHSRFQARKRVTAEQSMKRFKDYLESRGADLCKTTEFLSFYALPFIPDPRAHPSFKPLFAESWTTELKSRLESFLAASIKTTSQPRLLMLLHAARAKTAEDPKATSSVSASTVGAQQAASAELVRLLQQQVADGEQREILLIERHNRMQAEYHNLVGIAAELVEALESTLRGKPLTPEYMQNLFGRLTASSNLPNESISIPMRPSSVLRDRPTTPRVNASTTSLHAVMHHSSRTGTAAMPPSELPSQLPAVDYTAIKGRLQAAEDRPKGLLLQALRW # ORIGINAL: g9253.t1 original gene structure, not modified by PASA NODE_397_length_24798_cov_39.8606 AUGUSTUS gene 3615 5485 . + . ID=g9253;Name=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS mRNA 3615 5485 . + . ID=g9253.t1;Parent=g9253;Name=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 3615 3643 . + . ID=g9253.t1.exon1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 3615 3643 . + 0 ID=cds.g9253.t1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 3758 3822 . + . ID=g9253.t1.exon2;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 3758 3822 . + 1 ID=cds.g9253.t1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 3927 3999 . + . ID=g9253.t1.exon3;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 3927 3999 . + 2 ID=cds.g9253.t1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 4084 4520 . + . ID=g9253.t1.exon4;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 4084 4520 . + 1 ID=cds.g9253.t1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 4855 5262 . + . ID=g9253.t1.exon5;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 4855 5262 . + 2 ID=cds.g9253.t1;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 5364 5485 . + . ID=g9253.t1.exon6;Parent=g9253.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 5364 5485 . + 2 ID=cds.g9253.t1;Parent=g9253.t1 #PROT g9253.t1 g9253 MGDSERRSGRARKPIKYVDLDGDEADSSNSEDAFVDDKPKDRSGGGSKSSEQSSGSSSTESKRKNARERQFDRELQAVLEMSKQAASAAPATAAGDTDNVVKVEEAAVDGTEVEHPGDNDGDGLLAAPQSDGSAPATPSPRRHGAAASKGGSGGSAERKGRGKAKPTAVARQKAKGAPRKRKAEDSDDGASGGDDSGSAFDEDVSEPSAQSSDDDAFSADDASDSPKKKKGKGASGVKGKAAASGAAAPPGAKKARRTADTPKATPAAGRGRGRGKAPAAAAYPTQTGSAGLSSASPARAVVRPSVAANSAPRMTGMGTGMGMARAPLSAVAKPSSAGSPSSLGGVRIASGGAPRRVGLSRNMPVKPLHAYLKSPAS* # PASA_UPDATE: g9259.t1, single gene model update, valid-1, status:[pasa:asmbl_6788,status:3], valid-1 NODE_397_length_24798_cov_39.8606 . gene 21818 24746 . - . ID=g9259;Name=g9259.t1 NODE_397_length_24798_cov_39.8606 . mRNA 21818 24746 . - . ID=g9259.t1;Parent=g9259;Name=g9259.t1 NODE_397_length_24798_cov_39.8606 . five_prime_UTR 24643 24746 . - . ID=g9259.t1.utr5p1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . exon 24352 24746 . - . ID=g9259.t1.exon1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . CDS 24352 24642 . - 0 ID=cds.g9259.t1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . exon 24031 24225 . - . ID=g9259.t1.exon2;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . CDS 24031 24225 . - 0 ID=cds.g9259.t1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . exon 23578 23794 . - . ID=g9259.t1.exon3;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . CDS 23578 23794 . - 0 ID=cds.g9259.t1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . exon 23074 23234 . - . ID=g9259.t1.exon4;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . CDS 23074 23234 . - 2 ID=cds.g9259.t1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . exon 21818 22639 . - . ID=g9259.t1.exon5;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . CDS 22319 22639 . - 0 ID=cds.g9259.t1;Parent=g9259.t1 NODE_397_length_24798_cov_39.8606 . three_prime_UTR 21818 22318 . - . ID=g9259.t1.utr3p1;Parent=g9259.t1 #PROT g9259.t1 g9259 MAHFRTKHTHEATVSRAWRQGRYSVRTLLGHTGGVMCVGYDAKTDLIASGSCDGTLRLWSAQTGVCKQVLNGHKGGIMCLWLEDHTIVTGSEDKTLKIWTVGQDEAVATLTGHSRKINCVRMTKKTQIVSGSNDTSIRIWDMTRHEQESKLAGHLEPVTCIHISGRVMISGAEDAVVKVWDMAGRVCLHTIQGRPGERGLKCIAFDASMILAGSLDAEVKVFSLDTRQVVTSLKGHMYGVRCIHLDGGRLVTGSTDKTIKVWRTPVLEFESGDYVKVRRTDGRIQLAQVMTWMPMDRLYRVRWIDNGQFYYRDVDELTMYDLNQRGGECLLTLGDHDGVVNAIVSTGDVIVSGANDNSVHVYRFAPELPVAGGGDITPGSPNFGAMQRIPESTG* # PASA_UPDATE: g9257.t1, single gene model update, valid-1, status:[pasa:asmbl_6791,status:3], valid-1 NODE_397_length_24798_cov_39.8606 . gene 14073 16840 . + . ID=g9257;Name=g9257.t1 NODE_397_length_24798_cov_39.8606 . mRNA 14073 16840 . + . ID=g9257.t1;Parent=g9257;Name=g9257.t1 NODE_397_length_24798_cov_39.8606 . five_prime_UTR 14073 14176 . + . ID=g9257.t1.utr5p1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . five_prime_UTR 14470 14580 . + . ID=g9257.t1.utr5p2;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . exon 14073 14176 . + . ID=g9257.t1.exon1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . exon 14470 14664 . + . ID=g9257.t1.exon2;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . CDS 14581 14664 . + 0 ID=cds.g9257.t1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . exon 14831 15020 . + . ID=g9257.t1.exon3;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . CDS 14831 15020 . + 0 ID=cds.g9257.t1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . exon 15151 15448 . + . ID=g9257.t1.exon4;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . CDS 15151 15448 . + 2 ID=cds.g9257.t1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . exon 15642 16840 . + . ID=g9257.t1.exon5;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . CDS 15642 16104 . + 1 ID=cds.g9257.t1;Parent=g9257.t1 NODE_397_length_24798_cov_39.8606 . three_prime_UTR 16105 16840 . + . ID=g9257.t1.utr3p1;Parent=g9257.t1 #PROT g9257.t1 g9257 MADDQLAKLKKEAEELKAKIKADRDSKKDSTLGDVCKDAADVQRVTMRVRRTLRGHLAKIYAMHWSADNRHLVSASQDGKLIVWDAFTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYNLKTREGAVRVSGELAAHTGYLSCCRFLSDREIVTSSGDMTCALWDIETKQLKTQFQGHTGDVMSLSLNPQADANTFVSGACDAQAKLWDIRANKCVQTFTGHESDINAVQFFPSGQAFATGSDDASCRLFDLRADGEVNQYSSENILCGITSVAFSVSGRLLFAGYDDFNCNVWDTLKGPRVGVLTGHENRVSCLGVSGDGMALCTGSWDSMLKVWN* # PASA_UPDATE: g9255.t1, single gene model update, valid-1, status:[pasa:asmbl_6790,status:3], valid-1 NODE_397_length_24798_cov_39.8606 . gene 7558 11388 . + . ID=g9255;Name=g9255.t1 NODE_397_length_24798_cov_39.8606 . mRNA 7558 11388 . + . ID=g9255.t1;Parent=g9255;Name=g9255.t1 NODE_397_length_24798_cov_39.8606 . five_prime_UTR 7558 7901 . + . ID=g9255.t1.utr5p1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 7558 8009 . + . ID=g9255.t1.exon1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 7902 8009 . + 0 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 8104 8167 . + . ID=g9255.t1.exon2;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 8104 8167 . + 0 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 8252 8979 . + . ID=g9255.t1.exon3;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 8252 8979 . + 2 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 9090 9197 . + . ID=g9255.t1.exon4;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 9090 9197 . + 0 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 9319 9413 . + . ID=g9255.t1.exon5;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 9319 9413 . + 0 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 9558 9707 . + . ID=g9255.t1.exon6;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 9558 9707 . + 1 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 9853 9983 . + . ID=g9255.t1.exon7;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 9853 9983 . + 1 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 10111 10215 . + . ID=g9255.t1.exon8;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 10111 10215 . + 2 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 10394 10465 . + . ID=g9255.t1.exon9;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 10394 10465 . + 2 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 10612 10736 . + . ID=g9255.t1.exon10;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 10612 10736 . + 2 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . exon 10983 11388 . + . ID=g9255.t1.exon11;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . CDS 10983 11174 . + 0 ID=cds.g9255.t1;Parent=g9255.t1 NODE_397_length_24798_cov_39.8606 . three_prime_UTR 11175 11388 . + . ID=g9255.t1.utr3p1;Parent=g9255.t1 #PROT g9255.t1 g9255 MVAGKVPSGDRLAQLRTLMREHGLAAYLVPPEDAHQSEYLAEQDKRRAFISGFTGSAGAAIVTLDKAALWTDGRYFLQAEMQLDDNWQLMRMGTPDTPSQPEWLVRVLAEGSVIGVDPFLVPASKFRQLEKHLRREGRMSLVAVNRNLVDAVWGGLRPGAPSGLIFPLPLENTGKSHSQKLTELRAAMAGGGKNPRCDALVVSALDDVAWLFNLRGSDVEYTPVFIAYAIVTCDSAALYVDSSKLDTAALVHLRGGDAGPMHVRPYSAVAEDLAALASAAQHKIWLGPKCSEGLAQLVPKNKILESPLPTVLSKALKTGAELNGMRNSHIRDAAALCAFFAWMESEMAHPDRTHTEITAADKLELFRRYQREFVSLSFPTISSSGPNGAIIHYRPEPGACATIDRNALYLCDSGAQYLDGTTDVTRTVHFGTPTAHERECFTRVLKGHIRFALAVFPTGTPGEAIDAFARQALWQVGLDYRHGTGHGVGSFLCVHEGPQRISHQFSGEPSGLQAGMVVTDEPGYYEDGSFGIRIENVMIVRKAATRFQFGGKDYLEFEPVTLVPMQLSLIDIGLLAPDEIAWLNHYHDTCRHRVRPVLESHGWAEAVAWLDRNTVHVAPAAHPLH* # ORIGINAL: g9254.t1 original gene structure, not modified by PASA NODE_397_length_24798_cov_39.8606 AUGUSTUS gene 5687 7332 . - . ID=g9254;Name=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS mRNA 5687 7332 . - . ID=g9254.t1;Parent=g9254;Name=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 7082 7332 . - . ID=g9254.t1.exon1;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 7082 7332 . - 0 ID=cds.g9254.t1;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 6415 6582 . - . ID=g9254.t1.exon2;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 6415 6582 . - 1 ID=cds.g9254.t1;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 6203 6334 . - . ID=g9254.t1.exon3;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 6203 6334 . - 1 ID=cds.g9254.t1;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS exon 5687 5996 . - . ID=g9254.t1.exon4;Parent=g9254.t1 NODE_397_length_24798_cov_39.8606 AUGUSTUS CDS 5687 5996 . - 1 ID=cds.g9254.t1;Parent=g9254.t1 #PROT g9254.t1 g9254 MHSSLYFVRFDRTEMAALAPTAPRLRWRILASAITRSSNNGVPSHDLAKASVRSFESYALLDRRTSGDDAAEYTLEEGRALFLRGKSVCELGGGMASVAGMSIAACCAPQRMLLTDGNDQSVADIRDFVLVFYNMRAFAFNIESNRRALGDSVVHAGRLVWSVDGGGEDPAWHGSFDIVIAADCIFFTEAHDSLVSTAARLLRPGGRFVSVAPMRGKTLSQFVSAAIQRREFSSVLVARCTGGEWDADVDRAIRCATAGAPANGFVSDLHEPLVVELTRCHSANNR* # ORIGINAL: g8007.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 7726 8355 . + . ID=g8007;Name=g8007.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 7726 8355 . + . ID=g8007.t1;Parent=g8007;Name=g8007.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 7726 8355 . + . ID=g8007.t1.exon1;Parent=g8007.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 7726 8355 . + 0 ID=cds.g8007.t1;Parent=g8007.t1 #PROT g8007.t1 g8007 MCAAWQQEFSDMPNVEIRHGKMQDVNVDCFVSPSNSKLFFDGGVDKAYQSMFKNLDRIAQATAWPLGFRDLFDQPYLPVGAACLVRFKTRQIICAPTMLLPQDVQRTSNAYTATKLALELVAKNNRLSPNQPIRSVAFSGMCTGYGHMSFEESARQMARAFRSSETMDIVGNACGILVYNPSPMKEQPNNYMNSQFIKITPIKGTPRLI* # ORIGINAL: g8004.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 2456 4918 . - . ID=g8004;Name=g8004.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 2456 4918 . - . ID=g8004.t1;Parent=g8004;Name=g8004.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 2456 4918 . - . ID=g8004.t1.exon1;Parent=g8004.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 2456 4918 . - 0 ID=cds.g8004.t1;Parent=g8004.t1 #PROT g8004.t1 g8004 MSLVKRLHEFASGLSHIDVSQLYNAVQMGTVSDGEAAFFELVASTCSSRIITHPDFDVLARRVQVWLIQQEAPPTFSDAMTVLYENYTNGSHSPMISRAVFEIVQENAKLLNATILPLSDQRFDYFGLKTLAASYLKRRDDGRIVETPQYMYMRIAIGVHGRDIVSAIQMYRDMSEHKYIHATPTLFNAGTDRPQCSSCFLLGAGDSVDGLYKCVSDCAAIAKHAGGIGIHLSNVRARGTAIAGIHGVANGLLPYVRVLNQSVNHIAQDRRRSNFALYLEPWHVEFPEFVTLKRFFGDDESQARNLAYAVWMPDLFMERVEQDEQWSLFCPHECPGLCDSYGLEFRQLYERYEREGKYKKQISAMKLWFEILETQIETGMPYMLYKDRCNELSNQKNLGTIRSSNLCAEIVQYSHVPEGTDRRATGTDRRATTVPSEFTAGTDRRATTVPSEFTAGCEFSAVDSTVVARRSVPVAEHAVCNLASLSLPSFVVESENGDVQFSFDALHETTKRVAVNLNRIIDVNFYVNEETRRSNFRHRAIGIGMQGLADVFALLDYNFDSAEAAELNRQIAETMYHAALEKSWELAKERGAPYETFAGSPLSAGVMNGVDVDAPSRYDWKKLRDNIMKDGVANSLLLALMPTATTAHILGNTESFEPFTTNIYTKKVLAGNFIVINQHLVRDLERLNLWTPEIVEEIKENYGSVQAITKIPQRLRDKYKTAWEISMKTVIDLAADRQKFVCQSQSMNLFLAAPTYKALTSMLFYGWKRGLKTGLYYLRSKPATNPAQVTVAAKTVSFQDQLRAAREAAEAGGPCDMCSA* # ORIGINAL: g8005.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 5379 6122 . - . ID=g8005;Name=g8005.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 5379 6122 . - . ID=g8005.t1;Parent=g8005;Name=g8005.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 5379 6122 . - . ID=g8005.t1.exon1;Parent=g8005.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 5379 6122 . - 0 ID=cds.g8005.t1;Parent=g8005.t1 #PROT g8005.t1 g8005 MELITAASILSGIIKKSNNVAADIVRWSVDHDGIRMSAIDQAHVTVADMFLHNTSFAQYKLPTPVEFAFTLDTVNQIMGRSITGDLVSLTLPKQDVFRITFVSATRTLEYDVRINDDTSEGMIIPPVDNYIALDEKLFVEACKNIAIAGEEVDIVYQNHELVFKTKSLLSGVHTFPAQQLRIRGEAPPDGTKTTISVPLTLKTIAAPRIADIVLLHLEKDQPFRMKYEIGQGYLQFVIVPKVFDEDD* # ORIGINAL: g8008.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 8520 9056 . - . ID=g8008;Name=g8008.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 8520 9056 . - . ID=g8008.t1;Parent=g8008;Name=g8008.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 8520 9056 . - . ID=g8008.t1.exon1;Parent=g8008.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 8520 9056 . - 0 ID=cds.g8008.t1;Parent=g8008.t1 #PROT g8008.t1 g8008 MRYADGAFTDNYISTIGVDFKIRTINMNGKILKLQIWDTAGQERFRTITTSYYRGAHGAIIVFDVCDRDSLTNVKHWLSELERYGSTGVTKMLVGNKMDRRDRQITTAMGKQLADTLNVKYAEASAKTSAGVDDVFMTLCSEMLKPIAPARAPPSTIALPAKPIQLDGSTNAGRTGCC* # ORIGINAL: g8003.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 1316 1846 . - . ID=g8003;Name=g8003.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 1316 1846 . - . ID=g8003.t1;Parent=g8003;Name=g8003.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 1316 1846 . - . ID=g8003.t1.exon1;Parent=g8003.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 1316 1846 . - 0 ID=cds.g8003.t1;Parent=g8003.t1 #PROT g8003.t1 g8003 MDLKEIIDFTNAPNDETLLNATIDETLRIVVEGIPDSEDEDNERRRQRLEAWHIRLRVLCAICDSSSDSFNRAKLHIMESKNFLAEVVSLLSPFAHWDNECESRLRIAALSFLSAMCGRDVEMARVCVDAGLLLPLIALEGAAEMLKTAARQKPPREAYAGLCAVLGVNSVPFSGD* # ORIGINAL: g8002.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 368 1159 . - . ID=g8002;Name=g8002.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 368 1159 . - . ID=g8002.t1;Parent=g8002;Name=g8002.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 1063 1159 . - . ID=g8002.t1.exon1;Parent=g8002.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 1063 1159 . - 0 ID=cds.g8002.t1;Parent=g8002.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 368 771 . - . ID=g8002.t1.exon2;Parent=g8002.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 368 771 . - 2 ID=cds.g8002.t1;Parent=g8002.t1 #PROT g8002.t1 g8002 MFDNSPIVRHLSPAAVLFAFVERAVGPDCPKRVKARYYKAAPAVLIFREPANLAQFAGLRFENASEEWKKYIYFSRHEAIDGLATAFGETFLDSLYYVSGPISEKVPSASDDISSPWSAVEPLPLSGMQLAVKSPYNKALLSAFQNNLLGIVVWDPRAHAFCRSPS* # ORIGINAL: g8006.t1 original gene structure, not modified by PASA NODE_1815_length_9113_cov_43.3273 AUGUSTUS gene 6243 6761 . + . ID=g8006;Name=g8006.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS mRNA 6243 6761 . + . ID=g8006.t1;Parent=g8006;Name=g8006.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS exon 6243 6761 . + . ID=g8006.t1.exon1;Parent=g8006.t1 NODE_1815_length_9113_cov_43.3273 AUGUSTUS CDS 6243 6761 . + 0 ID=cds.g8006.t1;Parent=g8006.t1 #PROT g8006.t1 g8006 MAEINFAKTALYNEFMSPRNKTRVDASVRSEVWRQSGGKIGIDKQNRTDLELVMTTYFRENARVIEPNQAAQIAKLNAGLVKELAPKTLSAVEAYYHYMGMVTNSIPVMEAPKLVSMTGRNALTGGMERLSGSGITGMMTRQTTASTSKQQSGWIDWTAAAGLKTDEFGRPQ* # PASA_UPDATE: g881.t1, single gene model update, valid-1, status:[pasa:asmbl_5674,status:12], valid-1 NODE_3177_length_4096_cov_31.242 . gene 108 3939 . - . ID=g881;Name=g881.t1 NODE_3177_length_4096_cov_31.242 . mRNA 108 3939 . - . ID=g881.t1;Parent=g881;Name=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 3867 3939 . - . ID=g881.t1.exon1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 3867 3939 . - 0 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 3263 3449 . - . ID=g881.t1.exon2;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 3263 3449 . - 2 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 3049 3092 . - . ID=g881.t1.exon3;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 3049 3092 . - 1 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 2595 2685 . - . ID=g881.t1.exon4;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 2595 2685 . - 2 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 2230 2381 . - . ID=g881.t1.exon5;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 2230 2381 . - 1 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 1908 1987 . - . ID=g881.t1.exon6;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 1908 1987 . - 2 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 1658 1789 . - . ID=g881.t1.exon7;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 1658 1789 . - 0 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 944 1111 . - . ID=g881.t1.exon8;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 944 1111 . - 0 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 593 629 . - . ID=g881.t1.exon9;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 593 629 . - 0 ID=cds.g881.t1;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . exon 108 372 . - . ID=g881.t1.exon10;Parent=g881.t1 NODE_3177_length_4096_cov_31.242 . CDS 108 372 . - 2 ID=cds.g881.t1;Parent=g881.t1;3_prime_partial=true #PROT g881.t1 g881 MCAAQVYTILSNLDFKDESDMWHRGIDTAIEMGLFSAAYPLHDGMLNPDEVRVEPNGILASESRRFLADNWAGYGSMFKLQPIDHIRDYFGEKIGIYFVWLGFYTSWLIVPTLFGLLVFIYGLGKYQNFKPALEVCTSNITVCALCETCDKWQLSTACSRYKMAFIFDNDLTLPFAVIMSLWATLFLEFWKRRNARLAHDWNVMGFEKQEIARPQYKGVVPVKDEATGTVTYVYPFHMRLMKLTGSLSIIFLMIGVVIVLVIGVIAYRLAVAASIYKKNPGTALGTNAGLITSVTAALLNLICIIVLNQIYRRVATSLNKWENHRTQTQYEDHLSFKIFLFEFVNSYASIFYIAFFKGRFSGRPGDDNTLFGYRLERCPEYGCMLELTIQLGIVMVGKQAFGNIMEVAV # PASA_UPDATE: g9167.t1, single gene model update, valid-1, status:[pasa:asmbl_6174,status:12], valid-1 NODE_3526_length_3270_cov_37.6063 . gene 105 3097 . - . ID=g9167;Name=g9167.t1 NODE_3526_length_3270_cov_37.6063 . mRNA 105 3097 . - . ID=g9167.t1;Parent=g9167;Name=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 2500 3097 . - . ID=g9167.t1.exon1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 2500 3097 . - 0 ID=cds.g9167.t1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 2090 2246 . - . ID=g9167.t1.exon2;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 2090 2246 . - 2 ID=cds.g9167.t1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 1787 1949 . - . ID=g9167.t1.exon3;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 1787 1949 . - 1 ID=cds.g9167.t1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 1282 1518 . - . ID=g9167.t1.exon4;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 1282 1518 . - 0 ID=cds.g9167.t1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 865 954 . - . ID=g9167.t1.exon5;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 865 954 . - 0 ID=cds.g9167.t1;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . exon 105 197 . - . ID=g9167.t1.exon6;Parent=g9167.t1 NODE_3526_length_3270_cov_37.6063 . CDS 105 197 . - 0 ID=cds.g9167.t1;Parent=g9167.t1;3_prime_partial=true #PROT g9167.t1 g9167 MPNLPLDRKTSSGSSDGQDSPKTPRTPTSDRSQLSPRSKDKDGKEDKDFRGRARSANSRPKVSGRISGWFQRLVRSDAVADPPGQSGAPPPGTLKRELSQSADAINDDAETKLAPVVSPTNSPKGPSPQRSPKTPRTDSLRTFLGGKILQRGSSPKEPEPRRRSSKVAMDGTLYQRSKDGEFVIIGGTPEKLVEKVAAGDSQYANVFVLTFRHAISPADMMRLIASRFEIIDPDASPTAWKDMGSHAASQQRMVEFLAEWIILYPMDFVSGGEVRHILNDMIDALCSNGLDGVAARIRRNIADSCQPRPLSLLQKSNSSMALRRKTEFVELNPTKLASELTLQELEWYQRVRPTEVLIQLWCDDKDPIVQEAKGGLTAYIQWFNTVASWVSTQVVTTDDIRRRAQTIERFVKIAKVLRRLRNFNTLYAVVLGLHHGSVERMKRTWE # ORIGINAL: g11923.t1 original gene structure, not modified by PASA NODE_4019_length_2334_cov_45.772 AUGUSTUS gene 587 2213 . - . ID=g11923;Name=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS mRNA 587 2213 . - . ID=g11923.t1;Parent=g11923;Name=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS exon 2077 2213 . - . ID=g11923.t1.exon1;Parent=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS CDS 2077 2213 . - 0 ID=cds.g11923.t1;Parent=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS exon 1688 1871 . - . ID=g11923.t1.exon2;Parent=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS CDS 1688 1871 . - 1 ID=cds.g11923.t1;Parent=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS exon 587 1456 . - . ID=g11923.t1.exon3;Parent=g11923.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS CDS 587 1456 . - 0 ID=cds.g11923.t1;Parent=g11923.t1 #PROT g11923.t1 g11923 MIAIARRLSTSSYDVVCLQEIWSEADYDVLVSLLGESMPHHHLFRSGIIGSGLCVFSRHPIVEVHMRCYAVNGKPHRFKHGDWYGGKGVGCCRIDHPLGPVDFYTTHLHAEYCRDKDEYLAHRTLQAFELSRHVCATAGPRAIVLGDLNLEPEDLGFRLLLQRAGLVDAWVACNPGQAGNTCDVGTNSFAKESSSAGKRIDYVLFRPTSFIRCLESAVTLDGRIPDAPELSFSDHYGVEAVFDLREEAGAPVPIPGDDDVLERCVALPEAVEVIEKGVVAARRERKGHLITAAVFLLAWVALVTLGAASLCQTGAGVGVGGDYGVLSLVMASIALSVLQGLAIGGSIVFGWLGFAAAGHEVKGLRESLEHMRRENVRGTARRQRTALDRKVTAAAK* # ORIGINAL: g11922.t1 original gene structure, not modified by PASA NODE_4019_length_2334_cov_45.772 AUGUSTUS gene 63 316 . + . ID=g11922;Name=g11922.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS mRNA 63 316 . + . ID=g11922.t1;Parent=g11922;Name=g11922.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS exon 63 316 . + . ID=g11922.t1.exon1;Parent=g11922.t1 NODE_4019_length_2334_cov_45.772 AUGUSTUS CDS 63 316 . + 2 ID=cds.g11922.t1;Parent=g11922.t1 #PROT g11922.t1 g11922 ADGVQVSAQLHATGMPIQASSRGTHAREPACICGCVGRGCDARQRRVTCGRGGGCDGCEWPAAGGRTVRDTRHYYCRRKQNGVV # ORIGINAL: g14033.t1 original gene structure, not modified by PASA NODE_870_length_16518_cov_50.1242 AUGUSTUS gene 358 907 . + . ID=g14033;Name=g14033.t1 NODE_870_length_16518_cov_50.1242 AUGUSTUS mRNA 358 907 . + . ID=g14033.t1;Parent=g14033;Name=g14033.t1 NODE_870_length_16518_cov_50.1242 AUGUSTUS exon 358 504 . + . ID=g14033.t1.exon1;Parent=g14033.t1 NODE_870_length_16518_cov_50.1242 AUGUSTUS CDS 358 504 . + 0 ID=cds.g14033.t1;Parent=g14033.t1 NODE_870_length_16518_cov_50.1242 AUGUSTUS exon 809 907 . + . ID=g14033.t1.exon2;Parent=g14033.t1 NODE_870_length_16518_cov_50.1242 AUGUSTUS CDS 809 907 . + 0 ID=cds.g14033.t1;Parent=g14033.t1 #PROT g14033.t1 g14033 MQSFLLPTAFSGTLNCPQLEECHQNRLVGKFFGACTKFKYQLDECLTEDYLIARQKSLDDSRMKKKKRDELDRETGYAPSR* # PASA_UPDATE: g14037.t1, single gene model update, valid-1, status:[pasa:asmbl_9777,status:12], valid-1 NODE_870_length_16518_cov_50.1242 . gene 15047 16431 . + . ID=g14037;Name=g14037.t1 NODE_870_length_16518_cov_50.1242 . mRNA 15047 16431 . + . ID=g14037.t1;Parent=g14037;Name=g14037.t1 NODE_870_length_16518_cov_50.1242 . five_prime_UTR 15047 15087 . + . ID=g14037.t1.utr5p1;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . exon 15047 15090 . + . ID=g14037.t1.exon1;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . CDS 15088 15090 . + 0 ID=cds.g14037.t1;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . exon 15322 15417 . + . ID=g14037.t1.exon2;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . CDS 15322 15417 . + 0 ID=cds.g14037.t1;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . exon 15768 15821 . + . ID=g14037.t1.exon3;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . CDS 15768 15821 . + 0 ID=cds.g14037.t1;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . exon 16256 16431 . + . ID=g14037.t1.exon4;Parent=g14037.t1 NODE_870_length_16518_cov_50.1242 . CDS 16256 16431 . + 0 ID=cds.g14037.t1;Parent=g14037.t1;3_prime_partial=true #PROT g14037.t1 g14037 MIRFILINNRQGKTRLAKWYMPFEDDEKQKLIEEVHATVTIRDAKHTNFVEFRNYKIVYRRYAGLFFCICVDLNDNNLAYLEMIHNFVETLDKFFGNVCELDLVFNFYK # PASA_UPDATE: g14036.t1, single gene model update, valid-1, status:[pasa:asmbl_9779,status:3], valid-1 NODE_870_length_16518_cov_50.1242 . gene 11712 14544 . - . ID=g14036;Name=g14036.t1 NODE_870_length_16518_cov_50.1242 . mRNA 11712 14544 . - . ID=g14036.t1;Parent=g14036;Name=g14036.t1 NODE_870_length_16518_cov_50.1242 . five_prime_UTR 14443 14544 . - . ID=g14036.t1.utr5p1;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . exon 12919 14544 . - . ID=g14036.t1.exon1;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . CDS 12919 14442 . - 0 ID=cds.g14036.t1;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . exon 12468 12617 . - . ID=g14036.t1.exon2;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . CDS 12468 12617 . - 0 ID=cds.g14036.t1;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . exon 11712 12271 . - . ID=g14036.t1.exon3;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . CDS 11951 12271 . - 0 ID=cds.g14036.t1;Parent=g14036.t1 NODE_870_length_16518_cov_50.1242 . three_prime_UTR 11712 11950 . - . ID=g14036.t1.utr3p1;Parent=g14036.t1 #PROT g14036.t1 g14036 MSVGGESIDARLSDELFDDDDADVFVPTGVEAGRTFVERVVVVGGGWTGCLSAVQLARAGYHVTLVESRSLLMDGASKVPARLHLGGEYPLDKTLQTGKNCLHAALVFRQIMPEWVFTKMPPCTFIVAQGTEDEGELTVQSYVDYYSAIRDEYARYCEQNPANMLFGPPNEFFRVLEADEIRHLGCVAGGVTTKELGMNPVRVGAAIEMRLEQLGVRVITNAKVTRVIRRSVRPEGLAERADGQSFSQTATFQIVLSSFTDDNTASDVVLDADQILNSSWDGALHLEHSALTNCADAAWQESGLARQAASDSGVARLDCHLRAMALLDISRVPRPIPAPVFMMKGEYGGMWNPFNDKYAYLYLPSRRSAYIDSASLSKPAVSEASGGLGGGGETAASGNKRDNGTPTEVPDTWHDVMRAGPADKQERLDAQMRDQIALYPFLKDAVAVDLVVRTIVNQNHNFVFKAVVAKAQQVADKHWTMALSKATGLSDDTKTAIKRSSTDMETNKWRVSARLAFSRRKESITARTRANTGVTTLGPGFFTATPGKGTYAPLISLQVLNAIQNQSCAWDNIRSAECLVATSNIAVPVNPKFALYDNGAPDDDGSPSAAPFAQWRRGQLTYFVCVVSLCVCMCSLPTFPGMTHTHTRMFRSPWNLPGCHCDVL* # PASA_UPDATE: g14035.t1, single gene model update, valid-1, status:[pasa:asmbl_9776,status:3], valid-1 NODE_870_length_16518_cov_50.1242 . gene 4805 9899 . + . ID=g14035;Name=g14035.t1 NODE_870_length_16518_cov_50.1242 . mRNA 4805 9899 . + . ID=g14035.t1;Parent=g14035;Name=g14035.t1 NODE_870_length_16518_cov_50.1242 . five_prime_UTR 4805 4816 . + . ID=g14035.t1.utr5p1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 4805 5008 . + . ID=g14035.t1.exon1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 4817 5008 . + 0 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 5544 5626 . + . ID=g14035.t1.exon2;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 5544 5626 . + 0 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 5825 5915 . + . ID=g14035.t1.exon3;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 5825 5915 . + 1 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 6237 6398 . + . ID=g14035.t1.exon4;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 6237 6398 . + 0 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 6638 7096 . + . ID=g14035.t1.exon5;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 6638 7096 . + 0 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 7222 9503 . + . ID=g14035.t1.exon6;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 7222 9503 . + 0 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . exon 9799 9899 . + . ID=g14035.t1.exon7;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . CDS 9799 9874 . + 1 ID=cds.g14035.t1;Parent=g14035.t1 NODE_870_length_16518_cov_50.1242 . three_prime_UTR 9875 9899 . + . ID=g14035.t1.utr3p1;Parent=g14035.t1 #PROT g14035.t1 g14035 MRRAVALPSSLRRFAHSEAAAPKSAPFPSKPSKPLSDVYVPADVERGWYEWWEGSGLFRPRGTKDSDRVFSLVLPPPNVTGSLHIGHALTVTIQDALVRWRRMHGDCVQWIPGTDHAGIATQAVVERKLLRERGITRHSMSREAFVGEIWQWKQQYGGTITSQLRTLGASLDWEREVFTLDDAYSNAVSEAFVRLHESGLLYRATRLVNWSCHLRTALSDIEVDEVAVEGPTDMRVPGPAKMVSVGEMHAIAYRVADSVPVDGSEQELVVMTTRPETAFGDVAVCVHPGDADRARFVGHHVINPVNGRRIPVIADAEFVTLGLGSGAVKITPAHDHNDYRLAQKLNLPITLSIMNEDGTMNAHCGTFSGTDRLAARAQVVEMLSRIGAYRGKSKHATSVEVCSRSGDIIEPLLKPQWYVRCGEMSARAARAVREGKLGIEPETYGAEWLRWMDNCNDWCVSRQLWWGHRIPAYRIMPNGKRTASKVEDTPLSHVTASPAPATSTPMRGEAGAHSVASASVDSSGIVGEKGVGWVVARTADEAHAKAAVVAGELGLSVGEWALERDEDVLDTWFSSALFPMATAGWPTPGWDKPRVREGEGDAPDLPVPSSHPLSVMETGADILFFWVARMVMLGTQMSDDGRLPFRKVWLHPMVRDAQGRKMSKSLGNVIDPLNVIRGVSLGTMQASLAESNLDVREVKRASTQLAKEYPEGIRACGTDALRFALAAYLEQGRNINMDVDRVHQAGNFCNKLWNAVRFALMRASPVLQHTVPLLTAGRGRSPLVDPLSSANPRLELNPDTLSLYDRWIITRLCRALRTYDGAMHGFRLAAAVQSAQRFFHNDLCDVYFENRRTTLQQFATKCAAGEHVDPADAESAHATAAVLMHCLDASLRMLHPFIPFVTEELYQHLWASFPLRKTAESISLVPFPMADTYDPYCDDAVEGTVAAVQGVLFAARSIRQRQNIPVDTKIAMYFRHTNSDVSRAVLANAEAVMRQGQLCSLESLPSGALSAGDAANSRGVDERTLVPFVVDDACTVYVSLAGIKLDISALLGRSLKRKEDIGVRAQKLRTRMADATYNVRVQPKAREEHRDTLAKLDAELAEIDSEIERLSLLK* # PASA_UPDATE: g14034.t1, single gene model update, valid-1, status:[pasa:asmbl_9778,status:3], valid-1 NODE_870_length_16518_cov_50.1242 . gene 2618 4526 . - . ID=g14034;Name=g14034.t1 NODE_870_length_16518_cov_50.1242 . mRNA 2618 4526 . - . ID=g14034.t1;Parent=g14034;Name=g14034.t1 NODE_870_length_16518_cov_50.1242 . five_prime_UTR 4205 4526 . - . ID=g14034.t1.utr5p1;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . exon 3928 4526 . - . ID=g14034.t1.exon1;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . CDS 3928 4204 . - 0 ID=cds.g14034.t1;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . exon 3372 3638 . - . ID=g14034.t1.exon2;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . CDS 3372 3638 . - 2 ID=cds.g14034.t1;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . exon 2618 3186 . - . ID=g14034.t1.exon3;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . CDS 2825 3186 . - 2 ID=cds.g14034.t1;Parent=g14034.t1 NODE_870_length_16518_cov_50.1242 . three_prime_UTR 2618 2824 . - . ID=g14034.t1.utr3p1;Parent=g14034.t1 #PROT g14034.t1 g14034 MFAYLCRAVAREAGIHVHATHARIPPLAIRSLRSLASSVTPLNRSVWEIESRRTHILPHTPLCMPALFRNGGTADCVFANRGIATTAPLLLKDISGKRRIPLRPRRPLRRNGSSSGSEAGDSESGEFLPEGPIEGHLAHATSRQPSHVGPTVINSLSTSAGILGHPALVISRQIEMMNLLVGFEQANQYSIMNQSGHIVGHIVEEDSLLKSLLRNVFLLHRKFTAHVFDGNGRVVLRIRRPYYLINSRIYIETAEGEVVGEVQQRWHLWRRRYDLFLGKRQFAVIQRTRVQSGEKSSRGRL* # ORIGINAL: g3053.t1 original gene structure, not modified by PASA NODE_9088_length_344_cov_27.1413_potentialcontaminant AUGUSTUS gene 1 344 . - . ID=g3053;Name=g3053.t1 NODE_9088_length_344_cov_27.1413_potentialcontaminant AUGUSTUS mRNA 1 344 . - . ID=g3053.t1;Parent=g3053;Name=g3053.t1 NODE_9088_length_344_cov_27.1413_potentialcontaminant AUGUSTUS exon 1 344 . - . ID=g3053.t1.exon1;Parent=g3053.t1 NODE_9088_length_344_cov_27.1413_potentialcontaminant AUGUSTUS CDS 1 344 . - 1 ID=cds.g3053.t1;Parent=g3053.t1 #PROT g3053.t1 g3053 DACEEAARSVSPQSQQAELASWIGGDIAKILLRRFLSPVLCFPAMRGTADARKDVENTLRSSPLLRFSHLLGGLLQEALLNRTIGLVAGTKWWARSLAVSVRDLMGGHVQPWSL # ORIGINAL: g12224.t1 original gene structure, not modified by PASA NODE_1300_length_12302_cov_41.7134 AUGUSTUS gene 10570 11904 . - . ID=g12224;Name=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS mRNA 10570 11904 . - . ID=g12224.t1;Parent=g12224;Name=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 11509 11904 . - . ID=g12224.t1.exon1;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 11509 11904 . - 1 ID=cds.g12224.t1;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 11215 11348 . - . ID=g12224.t1.exon2;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 11215 11348 . - 1 ID=cds.g12224.t1;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 11010 11116 . - . ID=g12224.t1.exon3;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 11010 11116 . - 2 ID=cds.g12224.t1;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 10570 10905 . - . ID=g12224.t1.exon4;Parent=g12224.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 10570 10905 . - 0 ID=cds.g12224.t1;Parent=g12224.t1 #PROT g12224.t1 g12224 YWACKLFLLIGLVVASFFIPNQFFYHWSVIALVGAFVFVVIQLVLLVDFAHAWSESWVARMEETGSRKWLWALALSTGTMYAGSIALISGMLALYARGGCDLNKFLASFDLVVVVAISVVAVLPAVQERNPRSGLLQSAMVGIYLSYLTWSAVSNEPSDACSSSGHGTSATVSAVIGGVFTFVAVAYSSLASTTKSQMQRLSISAQASEDTEVALMESTGGDGSGGGEDSGDDDESTGNDDESEGVTYNYAFFHFVFCLASLYIMELLTNWATVRPSDAGAATVNIGRGWASVWVKVASGWVAAALYLWTLVAPVIFKDRDFS* # PASA_UPDATE: g12222.t1, single gene model update, valid-1, status:[pasa:asmbl_1144,status:3], valid-1 NODE_1300_length_12302_cov_41.7134 . gene 7640 9097 . - . ID=g12222;Name=g12222.t1 NODE_1300_length_12302_cov_41.7134 . mRNA 7640 9097 . - . ID=g12222.t1;Parent=g12222;Name=g12222.t1 NODE_1300_length_12302_cov_41.7134 . five_prime_UTR 9019 9097 . - . ID=g12222.t1.utr5p1;Parent=g12222.t1 NODE_1300_length_12302_cov_41.7134 . exon 8963 9097 . - . ID=g12222.t1.exon1;Parent=g12222.t1 NODE_1300_length_12302_cov_41.7134 . CDS 8963 9018 . - 0 ID=cds.g12222.t1;Parent=g12222.t1 NODE_1300_length_12302_cov_41.7134 . exon 7640 8793 . - . ID=g12222.t1.exon2;Parent=g12222.t1 NODE_1300_length_12302_cov_41.7134 . CDS 7695 8793 . - 1 ID=cds.g12222.t1;Parent=g12222.t1 NODE_1300_length_12302_cov_41.7134 . three_prime_UTR 7640 7694 . - . ID=g12222.t1.utr3p1;Parent=g12222.t1 #PROT g12222.t1 g12222 MPPYITEAGVHALRNYQYKGRDVSFLYNAAFRPLAKACAEYVPLTIAPNIITLAGLALSFVSFGLVVHYGYEVPRWLCVVCGINLFLYQLLDNMDGHQARRTGMASPLGQLFDHGCDAVNTTVSSYVFATALQLSPEQGMGFMVCGYVTFYFATWDEYHTEEMYLGPINGADEGVFLTYSFYFLTAVMGREAWLKPIAFGVPANIALTALSIVLSVGCWADAVRRVRAKRPTQIPAALSRLAPVAVFVAFALLWVCGPLRPEQPQMWVIVIAMGSVYAYIVCRLILAHVCKLPFAVHQPTLGVMAAAIANRYIGHWLLGAPLLPESLVNLGCMCVGLLIFGAYVLRVIGEITTALNIPCFTVTRAVKEAAAREAAAREAASTTA* # PASA_UPDATE: g12220.t1, single gene model update, valid-1, status:[pasa:asmbl_1143,status:3], valid-1 NODE_1300_length_12302_cov_41.7134 . gene 1626 2824 . - . ID=g12220;Name=g12220.t1 NODE_1300_length_12302_cov_41.7134 . mRNA 1626 2824 . - . ID=g12220.t1;Parent=g12220;Name=g12220.t1 NODE_1300_length_12302_cov_41.7134 . five_prime_UTR 2714 2824 . - . ID=g12220.t1.utr5p1;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . exon 2565 2824 . - . ID=g12220.t1.exon1;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . CDS 2565 2713 . - 0 ID=cds.g12220.t1;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . exon 1930 2449 . - . ID=g12220.t1.exon2;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . CDS 1930 2449 . - 1 ID=cds.g12220.t1;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . exon 1626 1839 . - . ID=g12220.t1.exon3;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . CDS 1696 1839 . - 0 ID=cds.g12220.t1;Parent=g12220.t1 NODE_1300_length_12302_cov_41.7134 . three_prime_UTR 1626 1695 . - . ID=g12220.t1.utr3p1;Parent=g12220.t1 #PROT g12220.t1 g12220 MSHLRCTEGARDKSAWCDVPEADGPDLDSGGVDEDIEARMHRMDDMHKRRYCEWVKHEDNFYYVLRNLRTICACGAYDARTIARGIDWIIAEYSDTKAAQLLYKLGLDLPPSFMAGVLCELMVPWQSVQRTAEVLAAFVGGMDVESSASFVQIATRGWDALVILRLVGILETRLAMSKSDFRLFLELFTAHLRDKIRRDQLETLRNLRAIYETRLAVAGLKLSVAKYNLAIANYNLTVANCSLSLAQGSISTSKAAPSGGACEGEGGEAD* # PASA_UPDATE: g12221.t1, single gene model update, valid-1, status:[pasa:asmbl_1141,status:12], valid-1 NODE_1300_length_12302_cov_41.7134 . gene 3246 7594 . + . ID=g12221;Name=g12221.t1 NODE_1300_length_12302_cov_41.7134 . mRNA 3246 7594 . + . ID=g12221.t1;Parent=g12221;Name=g12221.t1 NODE_1300_length_12302_cov_41.7134 . five_prime_UTR 3246 3317 . + . ID=g12221.t1.utr5p1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 3246 3554 . + . ID=g12221.t1.exon1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 3318 3554 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 3639 3720 . + . ID=g12221.t1.exon2;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 3639 3720 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 3822 3955 . + . ID=g12221.t1.exon3;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 3822 3955 . + 2 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 4140 4351 . + . ID=g12221.t1.exon4;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 4140 4351 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 4472 4589 . + . ID=g12221.t1.exon5;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 4472 4589 . + 1 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 4685 4828 . + . ID=g12221.t1.exon6;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 4685 4828 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 4986 5132 . + . ID=g12221.t1.exon7;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 4986 5132 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 5224 5322 . + . ID=g12221.t1.exon8;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 5224 5322 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 5477 5572 . + . ID=g12221.t1.exon9;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 5477 5572 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 5653 5803 . + . ID=g12221.t1.exon10;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 5653 5803 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 5980 6200 . + . ID=g12221.t1.exon11;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 5980 6200 . + 2 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 6299 6388 . + . ID=g12221.t1.exon12;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 6299 6388 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 6489 6589 . + . ID=g12221.t1.exon13;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 6489 6589 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 6739 6843 . + . ID=g12221.t1.exon14;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 6739 6843 . + 1 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 6957 7029 . + . ID=g12221.t1.exon15;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 6957 7029 . + 1 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 7145 7259 . + . ID=g12221.t1.exon16;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 7145 7259 . + 0 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . exon 7408 7594 . + . ID=g12221.t1.exon17;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . CDS 7408 7556 . + 2 ID=cds.g12221.t1;Parent=g12221.t1 NODE_1300_length_12302_cov_41.7134 . three_prime_UTR 7557 7594 . + . ID=g12221.t1.utr3p1;Parent=g12221.t1 #PROT g12221.t1 g12221 MSAPVENLAVAVGEMKVEVAPAEAKPASEKKRAEKPKGEKVEKPKGEKAPQSDKPQGGDKKKAGKGKGADGGASAGPLELEPKPDYIDHRIQIFDRLKKEYEAEVAAKTPVPITVTLPDGKAVQGMSWRTTPLEVALGISKGLADNTIIAKVNGEVFDLDRPLEQDCKLELLKWDNPDAKAVYWHSSAHILGEALELRTGGCLCYGPPIDEGFYYDVFLGDKSIHPEEFAALETISKRIMKDGQKFERLEMSKADLLEMFKYNDFKRRIITERIQEDRTTVYRCGPLIDLCRGPHVRDTGKIKAMMVTKGSASYWEGNSEAESLQRVYGISFPDSKQLTEWQKLQEEAAKRDHRKIGKDQELYFFHELSPGSCFFLPHGARVYNKLIALIRSEYVKRGFEEVITPNMYNSKLWQTSGHWQHYADNMFKFEVEKETFALKPMNCPGHCLMFDHRVRSYKELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAEDQIEAEIDGALDFLKAIYGIFGFQFNLALSTRPENYLGELSMWDQAEAQLAKSLDRFTQGLGIQWKENPKDGAFYGPKIDITIMDALKRPHQCATIQLDFQLPIRFNLSFMGADSEDKKRPVIIHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVLPISSKFHEFAEEVRAGIHAAGYYVEIDNDDGLTLAKKVLRAQTAQFNYILVIGEREQQNRTVNVRTRDNKVHGEHNLQSLLARFDRLEAEHVADDNTDF* # ORIGINAL: g12223.t1 original gene structure, not modified by PASA NODE_1300_length_12302_cov_41.7134 AUGUSTUS gene 9397 10456 . + . ID=g12223;Name=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS mRNA 9397 10456 . + . ID=g12223.t1;Parent=g12223;Name=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 9397 9498 . + . ID=g12223.t1.exon1;Parent=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 9397 9498 . + 0 ID=cds.g12223.t1;Parent=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 9579 9731 . + . ID=g12223.t1.exon2;Parent=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 9579 9731 . + 0 ID=cds.g12223.t1;Parent=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS exon 9869 10456 . + . ID=g12223.t1.exon3;Parent=g12223.t1 NODE_1300_length_12302_cov_41.7134 AUGUSTUS CDS 9869 10456 . + 0 ID=cds.g12223.t1;Parent=g12223.t1 #PROT g12223.t1 g12223 MNILQHKSWHVYSRDNIERVKRDEAKAKEENDAKERRRILAEQEARIAALRTKARAIPDEDRDGRAVVRSHNSRTDGLGRSGINEEALFAAAVGSSTDSPNLEAICERTRERQTEEKRVGLAPNYLVGQKGDDAEHPWYTRGTDPGAAEEVRRTSTSGDRSKRKDNARDGRSSTHRHASASLDPMHAVRAALDSGRAQARGSGVVSRAVAAGGAVLRAGGDDMSRMRAKRIERERAERERAARLLGVGPSPDAVVGEYSQQFNPHLARSRLRQAQKHAPY* # ORIGINAL: g10174.t1 original gene structure, not modified by PASA NODE_4164_length_2089_cov_31.8014 AUGUSTUS gene 92 1383 . + . ID=g10174;Name=g10174.t1 NODE_4164_length_2089_cov_31.8014 AUGUSTUS mRNA 92 1383 . + . ID=g10174.t1;Parent=g10174;Name=g10174.t1 NODE_4164_length_2089_cov_31.8014 AUGUSTUS exon 92 286 . + . ID=g10174.t1.exon1;Parent=g10174.t1 NODE_4164_length_2089_cov_31.8014 AUGUSTUS CDS 92 286 . + 0 ID=cds.g10174.t1;Parent=g10174.t1 NODE_4164_length_2089_cov_31.8014 AUGUSTUS exon 628 1383 . + . ID=g10174.t1.exon2;Parent=g10174.t1 NODE_4164_length_2089_cov_31.8014 AUGUSTUS CDS 628 1383 . + 0 ID=cds.g10174.t1;Parent=g10174.t1 #PROT g10174.t1 g10174 VYDSIDQDRKAEAATAERERKDTQKPKYIQALLKKAEQRKREDEVRYERKVHKEREKEGDQFADKEAFVTSAYKKKLLEMQEEERRAKEEAAREARDDVTKKTDMRGFYAGLFTKNVAMGADAIDAKKKAEEEKQIRETEEQEKQRSERERAEQEKQKSERERAAADAKILERRRQPRDESRDRNGSDGRRTHGAERGEQGGRGGTFSRDEHRSDFRSDAFVRSDGRDRSDDRDHRDAADGTRGAKRARDTEREGGARGEEETVHTQGTSSVADTKGDDVAAKFARRNDEQSVLSAKERYLARKAARAVATDAPPE* # ORIGINAL: g1907.t1 original gene structure, not modified by PASA NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS gene 3053 3472 . + . ID=g1907;Name=g1907.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS mRNA 3053 3472 . + . ID=g1907.t1;Parent=g1907;Name=g1907.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS exon 3053 3472 . + . ID=g1907.t1.exon1;Parent=g1907.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS CDS 3053 3472 . + 0 ID=cds.g1907.t1;Parent=g1907.t1 #PROT g1907.t1 g1907 MELTPKLFVAKVEEFKTYLEGTLSEESLRAGDQRAIVDKLRRDVRVWGTKAVVACKGNTRAFMTVFCAEVGMHIEPIRAKNYSHFSSMTADSLGITEEQFKDYECLFRLWKGNVLPLETKNKVREYVLVLYNLGNHLLN* # ORIGINAL: g1908.t1 original gene structure, not modified by PASA NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS gene 4065 8102 . - . ID=g1908;Name=g1908.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS mRNA 4065 8102 . - . ID=g1908.t1;Parent=g1908;Name=g1908.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS exon 4065 8102 . - . ID=g1908.t1.exon1;Parent=g1908.t1 NODE_1251_length_12755_cov_35.9858_potentialcontaminant AUGUSTUS CDS 4065 8102 . - 0 ID=cds.g1908.t1;Parent=g1908.t1 #PROT g1908.t1 g1908 MSNTTVLSHVARGPQDLYLYDEAGGGQFDQLYKRHTRFALETIEIPFNGQPGYSRRVCATLSPIGDVLKNLTLELYISRQTAVGEILTDAERQRARELLQFLLQRLDLVYEMIALRTIPKQVSVEAIELVLRAVLPVIERENEAVLSAIPLPPPPPTSDLPSVPIDKRLLRRLVRLINMSAELVTSNATESFLSIMQLAAQCVSTGPSTIIPLRGHILPDVSIMTLRVSGLQPVVVLTLCGQQPNHRMAVIASKGGIPSCVGVGGQIVIVSSEIVITVRKSDRTLKFTCGAIERSFQWPWIDFPNSVDDIIVGETDSFFLGQPSSTVTATGRTLDVYAIAPTELRINNATLTVSDTTATLNSTVWPVTSGRTAFLSIDQTGSIRKLVIGGVELQASTVLSVWADITNYMTPPMFVTLAHLLLYDEAARDSFASSIIKRLSAVGSPANVRAALALIFKKMADWIEPGGTTTNASVDQISAKWGLSGAAAAIGTDSAYAAAVRRVDSALELYDPAGLAADDKALLAQWVTIGGRLFQDGTNIAGEIQRELARASLSFQESKIPLWLPQFRPIVLAGDADGDGTGDDALFVRWSVTFDPTVSEDTPFFWVEYCVDGGEPSTLVLSVESDGTRQLLAVRGWGYAPPYDASGNGNGSGNSTWSDTALTERFLSVGLTSGDEYVIELKFRATGVDLKVRFGDDEVELIPTESLIGGGDDNLSVAVTDVRAANHPRLTSRSVLLGQVSSVWPSGIPSSDVVSLIPWDVDCADLPDAFVLVAEQSVELLCESGQRIVVDNVPVTDVGFPPTTVRVWESDGTIFASVQFPVEIRRLANCLYFSDGDGQRFAAEISSRIASASGGIVSAHRFDAIYYESAVPPGASPAQIIKQTGFEVISTPFRVEVYVRLVKMPTDGLVLKWGDWVTLTVVNSRLRVTTASGVAGEYPWRSDLLLYMEVTNGNLTVWVDEHAAVFGIVGVAVGVAVVEFGAVSVSELLVFSEEGVEAIAMISSAGLKYDGKVVVSAVGDVRALVVSDEDVVKSAIEKAIQLLESTVSDSCPPVSLRLIKSAELEIGGKTVCKIYGEWAEGWLRMRDVNCKGLDKMLGAGLVQGTVYMPLAFFFSERDGMALPLATAEDVKVLIEFDSEANLGGGDRLNIFGGRLLADVAHLGEREKRRMAKYSHTILLQTVELQKGYAKDLFMTLPLHDQCKELMWVTSPSDALVSINVQIENEDLFRSRPASYFQTVQPYFHHTGDCPEGFAVYSFALEPERMQPTGTQNMSMYSNIVLRYEPRRVLGIDNREVRVYSVHYKVLRLERSAAPHGVVPCATTVVGLEAGSGSGHRESAIRKTIL* # ORIGINAL: g172.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 12120 12866 . - . ID=g172;Name=g172.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 12120 12866 . - . ID=g172.t1;Parent=g172;Name=g172.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 12120 12866 . - . ID=g172.t1.exon1;Parent=g172.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 12120 12866 . - 0 ID=cds.g172.t1;Parent=g172.t1 #PROT g172.t1 g172 MLPPLPKTGSLLRFNNADREVTALDMLCSTDGTALSPPKRRLTMSPTSLTSVDFVSVPQPLCPAPTIRRPATFRQSQSYSGSEAQKSASSEFRRRASLQSFNTSAIGALPSTKSFFNAQKARRWTLSGSESIPPIPSESLTLSPLSPTSSTGSQSPGAFDRNLILDRAKTAELAKSVSINRKSRTPAYVHELLHKCDKMCAAEKGLFGLMEEIETIVTKMDTHLPELSDMAAELKSNFTHQIGSRRQD* # ORIGINAL: g176.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 34975 36835 . - . ID=g176;Name=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 34975 36835 . - . ID=g176.t1;Parent=g176;Name=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 36683 36835 . - . ID=g176.t1.exon1;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 36683 36835 . - 0 ID=cds.g176.t1;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 36351 36502 . - . ID=g176.t1.exon2;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 36351 36502 . - 0 ID=cds.g176.t1;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 35970 36113 . - . ID=g176.t1.exon3;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 35970 36113 . - 1 ID=cds.g176.t1;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 35667 35840 . - . ID=g176.t1.exon4;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 35667 35840 . - 1 ID=cds.g176.t1;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 34975 35413 . - . ID=g176.t1.exon5;Parent=g176.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 34975 35413 . - 1 ID=cds.g176.t1;Parent=g176.t1 #PROT g176.t1 g176 MHTIHRLIDLLLWHHFSFFNAFQTVFDSWFITFYNVIFTSLPVLAVGAFDQDVNDEISVKFPQLYILGQKNLLFNTKLFWMSLLKGIWTSVVIFFVPLATIRGLTHSNGTDGSDLIILGMMISCILVHVVNLQIALDTYHWTWMSHLFTWGSIGAYWLFALIVYSMSEIAGSTITYYNALFMSCDMGAFWFAFALAVVIVFMPIIMNRYIEVTYHPTPVDIVREICRFHPRDIALLSGDMEGGVAETTGSANAKGKVFTVDAVVLPSSQKLPAAPTFASSGAGVADVGRRHSEGGQSVSASSAVGSAIAVGDEVSGHTMSRRASRTGYAFAQEPGWADFVTPGPKCAIPEGEN* # ORIGINAL: g171.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 10006 10758 . - . ID=g171;Name=g171.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 10006 10758 . - . ID=g171.t1;Parent=g171;Name=g171.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 10006 10758 . - . ID=g171.t1.exon1;Parent=g171.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 10006 10758 . - 0 ID=cds.g171.t1;Parent=g171.t1 #PROT g171.t1 g171 MLPPLPNTGSQLRLNNVDREVPVHMSKSNSTATLSPPKRTMSPTSLTSVDFVNMPQPLCPAAPAIRRRATLRQSQSYSGSEAQKSASSEFRRRGSLQALNTLPSATEALPPIRKSPSFAQKARRWTLAGSDSIPPISSESLTPPATPLSPTESSTASLSPDFGRNLILDRAKMLAKSASINRKSRTPAYVDELLNKCDKLYDYEKGLFGLMGEIDTIVTNMDTRLPQLIDMAELKSNFIQLMRSDSRRED* # PASA_UPDATE: g170.t1, single gene model update, valid-1, status:[pasa:asmbl_1127,status:3], valid-1 NODE_129_length_36922_cov_47.9829 . gene 2089 4418 . - . ID=g170;Name=g170.t1 NODE_129_length_36922_cov_47.9829 . mRNA 2089 4418 . - . ID=g170.t1;Parent=g170;Name=g170.t1 NODE_129_length_36922_cov_47.9829 . five_prime_UTR 4223 4418 . - . ID=g170.t1.utr5p1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . exon 3903 4418 . - . ID=g170.t1.exon1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . CDS 3903 4222 . - 0 ID=cds.g170.t1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . exon 3547 3669 . - . ID=g170.t1.exon2;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . CDS 3547 3669 . - 1 ID=cds.g170.t1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . exon 3275 3422 . - . ID=g170.t1.exon3;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . CDS 3275 3422 . - 1 ID=cds.g170.t1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . exon 3070 3143 . - . ID=g170.t1.exon4;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . CDS 3070 3143 . - 0 ID=cds.g170.t1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . exon 2089 2918 . - . ID=g170.t1.exon5;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . CDS 2261 2918 . - 1 ID=cds.g170.t1;Parent=g170.t1 NODE_129_length_36922_cov_47.9829 . three_prime_UTR 2089 2260 . - . ID=g170.t1.utr3p1;Parent=g170.t1 #PROT g170.t1 g170 MSNSTTALEGLSSEDEISSNVNYKGMAVFAVFASVILFMCSGIFFYFAVRGTGFKYRRPHSKTKAPEENMLSGMATCITGVVWFSRAVLYIMHSGGHDVAFNIEDYRYYDYLLSCPMLVLDVCFITEQPFKWTITLLTALTLFIGAISVNSNKPETFAYFALGCVFFAMQFYWLFRNLYRRLADYPKNIRIYLKLGMYTFITVWPMFPILYVIGPRIAGFISLEADTYVHGFLDICAKGLYGAFLTRFRLCIEDTHNEQHYLNGGAHSTEPDTHYHAGGRGDRDNNGMSCASSQAGGKREAFAQRLEDVRVNIGSDMLPVQTRNVFVPALGGGNGNMDGDAYQLSQAEPGEALDMRALPHSQSPSMQHGHTGNGYVPSRPAPSVSGRQSVVAQSVRAGEQRRPPPSGDEVYMMLRNFNALVNGMLSGYEEPAAASEAHDS* # ORIGINAL: g175.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 31470 33305 . + . ID=g175;Name=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 31470 33305 . + . ID=g175.t1;Parent=g175;Name=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 31470 31526 . + . ID=g175.t1.exon1;Parent=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 31470 31526 . + 0 ID=cds.g175.t1;Parent=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 31910 32064 . + . ID=g175.t1.exon2;Parent=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 31910 32064 . + 0 ID=cds.g175.t1;Parent=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 32603 33305 . + . ID=g175.t1.exon3;Parent=g175.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 32603 33305 . + 1 ID=cds.g175.t1;Parent=g175.t1 #PROT g175.t1 g175 MGDKGSEPKSVKFLFGGLSGMGASLVVHPLDVVKNRMQVSGEGTTKREYKTSFHALGSIARKEGPRALYAGLTASLLRQATYTTTRLGVYTVLIEEFTKEDGEPPSFLAKAAFGVAAGALGAIVGTPPDLALIRMAVDGRLPLAQRRNYHNVFDALRRIVAEEGVVNLWRGCFPTVLRAMVLNAAQLASYSQAKEYFVSRYQLDPDHIGTHAAASMISGFLAAATSCPVDLAKTRIQNTKTGENYSGVMDVWHRCIKGEGFASLWKGFTPYYLRQGPHTLLTFIILEQLSMIYRKNAARNSASA* # ORIGINAL: g173.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 14227 17448 . + . ID=g173;Name=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 14227 17448 . + . ID=g173.t1;Parent=g173;Name=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 14227 15420 . + . ID=g173.t1.exon1;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 14227 15420 . + 0 ID=cds.g173.t1;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 15858 16214 . + . ID=g173.t1.exon2;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 15858 16214 . + 0 ID=cds.g173.t1;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 16322 17099 . + . ID=g173.t1.exon3;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 16322 17099 . + 0 ID=cds.g173.t1;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 17279 17448 . + . ID=g173.t1.exon4;Parent=g173.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 17279 17448 . + 2 ID=cds.g173.t1;Parent=g173.t1 #PROT g173.t1 g173 MGCDAQLQRKYVQKRVHAVSPFSAWWGGIVCAIIAIVFGIPFSIYSTISASETANLNVSFHQAASDLIDGISSQLSMTVKDIATLRIMSYANENFTAEQFYSAVDMLDKKTGVAIAYIPHVHHDMRARFEARVRHDNTDAASWPLYKDFQITDYNATLSAIVRVAPRNVYHPFLYMWPRPVPSNMSIIGFNIDDIDSSVVGDPSRSIRTGRPVLSVLTSARVLKYPAQRGVGFYVPVYKSTPLDEADRIAKGTGIFAAFAKLSHLIDGARRRAHANTLQIFVFDISLPEGMQLLYSESGACVQNVSNVTPVYGLISNQTIDAVDRTWLVIALPKESLINEKITFKPLLYTGVFGVVSTIIFGFAGFAIRLIERAHLRSDQSEQKRRFLSEMVGYVNHEIRNPLNGIIGLVEHAAETVKACVGFANPNRELLAVVTDLKDTIRMCDLVSHVVNDVLDIRKLEDGNFTINYEPVLLRRVLGDVIAIVQPKLKKSSSLRLIVEPFDNTLTFLGDAIRTLQVLINLVTNAIKFSESGEIHVSATIVSGGRVLPSGRNFTVREGHRSDVAMSSQTATQSLRFEVRDTGRGIEEQKKSLLFKPFSQIDESPHHGGSGLGLYLCVMLVELMGGRIDFDSAYGVGSTFWFEIPLIRLSDTEVDGASDETHHLSRMVHNNVQLSVSVPVPRQCSSISQQGHVDSPTTLLTSPVSRPIERDTRRLRKHLVCDDDRINRMVLRRYLLTLDHCEVDEVENGQDAVDKAAVNEYDVIWMDMRMPGLDGTAATRQIKSNLKCIDVPIIGVTGDITALDPDKDTGMYRILAKPIKKADISDILITLA* # PASA_UPDATE: g169.t1, single gene model update, valid-1, status:[pasa:asmbl_1126,status:12], valid-1 NODE_129_length_36922_cov_47.9829 . gene 108 1254 . - . ID=g169;Name=g169.t1 NODE_129_length_36922_cov_47.9829 . mRNA 108 1254 . - . ID=g169.t1;Parent=g169;Name=g169.t1 NODE_129_length_36922_cov_47.9829 . five_prime_UTR 1194 1254 . - . ID=g169.t1.utr5p1;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . exon 1104 1254 . - . ID=g169.t1.exon1;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . CDS 1104 1193 . - 0 ID=cds.g169.t1;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . exon 858 942 . - . ID=g169.t1.exon2;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . CDS 858 942 . - 0 ID=cds.g169.t1;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . exon 547 665 . - . ID=g169.t1.exon3;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . CDS 547 665 . - 2 ID=cds.g169.t1;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . exon 108 264 . - . ID=g169.t1.exon4;Parent=g169.t1 NODE_129_length_36922_cov_47.9829 . CDS 108 264 . - 0 ID=cds.g169.t1;Parent=g169.t1;3_prime_partial=true #PROT g169.t1 g169 MLRLAPLFSLGRGMVRGCAQAITGAPAAPMRTKMTLAKRMRKRNPSPTVNVILTNDVAGQGMSGTVVAVKRGYMRNMLDPTNQAVYATPDQLEAYGLVAPKKSRIGGERLTLIQKMSALMTKPVAMPDMYRGHLTPQEVSTAIHMNKNIL # ORIGINAL: g174.t1 original gene structure, not modified by PASA NODE_129_length_36922_cov_47.9829 AUGUSTUS gene 18595 30485 . - . ID=g174;Name=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS mRNA 18595 30485 . - . ID=g174.t1;Parent=g174;Name=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 30388 30485 . - . ID=g174.t1.exon1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 30388 30485 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 29414 30114 . - . ID=g174.t1.exon2;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 29414 30114 . - 1 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 28474 29168 . - . ID=g174.t1.exon3;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 28474 29168 . - 2 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 27955 28092 . - . ID=g174.t1.exon4;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 27955 28092 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 27129 27242 . - . ID=g174.t1.exon5;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 27129 27242 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 26785 26910 . - . ID=g174.t1.exon6;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 26785 26910 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 26025 26150 . - . ID=g174.t1.exon7;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 26025 26150 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 25599 25724 . - . ID=g174.t1.exon8;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 25599 25724 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 25287 25403 . - . ID=g174.t1.exon9;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 25287 25403 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 24788 24910 . - . ID=g174.t1.exon10;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 24788 24910 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 23481 24214 . - . ID=g174.t1.exon11;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 23481 24214 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 21647 23205 . - . ID=g174.t1.exon12;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 21647 23205 . - 1 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 20894 21315 . - . ID=g174.t1.exon13;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 20894 21315 . - 2 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 20512 20678 . - . ID=g174.t1.exon14;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 20512 20678 . - 0 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 20198 20259 . - . ID=g174.t1.exon15;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 20198 20259 . - 1 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 19799 19871 . - . ID=g174.t1.exon16;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 19799 19871 . - 2 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 18888 19555 . - . ID=g174.t1.exon17;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 18888 19555 . - 1 ID=cds.g174.t1;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS exon 18595 18608 . - . ID=g174.t1.exon18;Parent=g174.t1 NODE_129_length_36922_cov_47.9829 AUGUSTUS CDS 18595 18608 . - 2 ID=cds.g174.t1;Parent=g174.t1 #PROT g174.t1 g174 MLLAGNWTSAGSTNTFSYSCDKVNATRVLQSETLVFNAVECTPLASPSHWGVRLTVANGEVVVGEFSFNETSGTGLNAKLMLSLGAVSVNASVAGTAQLPAPIAFNRVSTGAFSGLAYLKSALCLSQWGDEIRLVGGVYPSFQPPFPNMQFVGSGWSSTVILQSGAQTIAIGASVSPIAFVGIFFNSTSSAPAVTINGGIATFNSTRFRGALSTPIVCDNGGALNMTSSLFINYAIANAVATSETRTGGALRIGRCDARIEETVFDEVNTNAHGGCIGAGMDANLTVVGCTFNSCATSGSGRSGGAVFALGSNHIAFEQSTFAGSRTFSGDGGALCILRATSLVIHNTTFKNSVTKGFGGSVYVSMCRRVDVTSSLFYNNQATGAGALHMLEVVEATVTTSSFLENFADLFAGAIYCTASVQTSTLTVVGSNVTRNAWRNPANQFVGGVYLAGTALIASFEDVLFDRNDAAIEGGIGALFVGGSVATTFQGCAFTSNRGSLGAVMFTEDSASVSMDSCFIEENTGGGGFFGGSESGGIFSVFGNNLNGGALYVVGSAFIDVDNCVVEQNTANLYGGAFYINNGGMDVRNCTFRQNNALNDGGAIYVMGASRISIDDSVLDSNRADHDGGAVAVSMNGGSTFFSMNNCIVERNSATEDGGAIAVDGRSQLHFQQCVFRGNSANNGGMIRVVGSQSVVSLNGSILASNTARQNGGAVYVGSEASIDVENCVIERNTAGLHAGAFYAPNWSVMNARKSIVRENSAAMYGGAIYSNGLSTGTISGCDFDSNKALRGGVLAYDAAAQSEETTKYLSFSFFDSTFRNNSATEIGGVICILFVDVTSMTPAVTLIHGYASGNLAPKGGFLSVSTPSNAPVDMGGNNEVNGVTAASIVLSNMLIADSGEGIEGGALHLKHGGLLQAYNVTFSGCTADKGGSIYMGDDAIAHLTLCIVISSTGTSGGGIMLSDKSHLTLDGGSAIVGCVALVAGGGILAESSSTLIVSESEATDNRASMGGFMSLSGYAVANVASGQWMRNRAEVHGGAVYMNAFTSLLITTMTATENCAGYRGGAIATDGYARVRLQKMDSTSYNALNASLIVFTGNSATQGGAMHLSIGASAVLSSVLFHGNVASEAGGAVFATGCSELHLSSSTMQGNLATPSGDGGAVAFEDLSLVLLAGVRMTGNEAQSGGALFGRVEPRRSVCTSASKNATNAAAKGDNGLGEDVFCNRNAIQRRRRQLHTRDMDDELYDAFYDDLDGGIYRKASIAVRRCVFEGNVAVTEGGAVRIAGQAKGVLRYCNVTGNVVTATGDSGVGSAVYWGPSADAPTNALRIVQSTITHNNGTYGTLYTKRPDDSASVFAMQVEDTIVLNNWLSSAQDQPGGAAADFGTSVTSLSVNISGTTGADLQKITVQSGDVASSAIVRVRLLDAYGGTARPNGLVVRLVMLPSAVSLSNGSGVAQSATVGSASDAVRAIVVGKTEATVPQNGIAEFSDLRFIGLPGGYSLFTMTPSLGTITPVSVPVEITACSDGFHMQPYQDLSELWTCERDVVSASASERKDNTATLAPAILLPTLAVCALVGGVLWWRIQIAKKAASLATHQQFLERHFRVQESALKLASVEVDHESIDLTDPLGQGEFGMVHKALLTAGDRPRLCAAKSMRDGTTFKERIDFIAEAEVMLGLQHPNIISLVGVAVKKEPILILLEFAPHGNLKSFVQDIPTHRRDSRNTKTLLATFAAQIAKGMGYLASMKIVHRDLAARNCMVAQDVFGDYVVKVADFGLSRRFERSYYQKKSKGGRLPFKWMSPEALSGVYSEKSDVWSWGVTMFEAYAFGASPYPGYDPAGLARFLRDGERLDQPDACPWAMYNLLCECWAYEAARRPSFTDIGDRLALIAQLKPSRSKEGDVGDVTATAIESGSGVAVGITTGLSGPDRVTTSTSKSRIVQSSQSTGNTDRGRISDVAVHILDRASNSYVMDSAIISTTRTLRSEDNSYDNFERIDLSAGSVEMGYLNLSNDIPSKDVDV* # PASA_UPDATE: g4650.t1, single gene model update, valid-1, status:[pasa:asmbl_494,status:3], valid-1 NODE_112_length_38911_cov_41.3553 . gene 32414 35137 . + . ID=g4650;Name=g4650.t1 NODE_112_length_38911_cov_41.3553 . mRNA 32414 35137 . + . ID=g4650.t1;Parent=g4650;Name=g4650.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 32414 32538 . + . ID=g4650.t1.utr5p1;Parent=g4650.t1 NODE_112_length_38911_cov_41.3553 . exon 32414 32633 . + . ID=g4650.t1.exon1;Parent=g4650.t1 NODE_112_length_38911_cov_41.3553 . CDS 32539 32633 . + 0 ID=cds.g4650.t1;Parent=g4650.t1 NODE_112_length_38911_cov_41.3553 . exon 32912 35137 . + . ID=g4650.t1.exon2;Parent=g4650.t1 NODE_112_length_38911_cov_41.3553 . CDS 32912 34994 . + 1 ID=cds.g4650.t1;Parent=g4650.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 34995 35137 . + . ID=g4650.t1.utr3p1;Parent=g4650.t1 #PROT g4650.t1 g4650 MPALVLFGRRWQCATDDFVIPSMLSLLLRSLWLAAYAVVLWVVKLDDKCEKGHLFFKIYLAGAIGVYGVSILLDALMINASRKGSIMSSKQRTSVPIILYFFAALYLLEIGWASLGAYWVFGRGFNCDDVSSSALAALKGTVISNWVFIGFVLIVAWFFFDPIGGKATTHDALMEYRQGDEYHRVWEEQCKSCCVFSGIGKDSRMVYTEVSHIFANFFRNLDVVPSDVVAGLILLRQAQKHDETQRVSSNGESGIQYHQSTVNAKALDTKSTVETLDLLEVDYFAKYALAVYGWPLYVFMHPCTGIIRLNVCDCRCCSGGCCGNSVVAVTGDNCCLCNLHALKKQSGLGDADIVYTSFLNGLYQTPYYIAVDHARQTVVIAVRGTMSLADCMTDLTANETPIEIPGVSEKCFAHKGMLQAAQRIKQDLEDRHILTDLFRDNGPCASYGLVVVGHSLGAGTGTLLALLLRSQYSGLFCYAYSPPGCLLNEAAAKHSEQFCISLVVGKDVVPRMSFYTAEAMRDQMMEVLALSPRPKWRIIGGNFIVGHPKEQYDYAAVDTEDPEAREQEPIAVLQRYRALRAQEAPRERMYLPGRILHLVKTHSSRRMIVSKTRSYKTEWAEREGFAKIVISPLMIGDHFPDTVKEVLGLVVGSLGGGTVGTRTVHAKSNAHDAILPPVTAQAGFDGIGYGKQPASAAASQSASKYEDMRQPLISSQPSSSQNWKN* # PASA_UPDATE: g4644.t1, single gene model update, valid-1, status:[pasa:asmbl_496,status:12], valid-1 NODE_112_length_38911_cov_41.3553 . gene 11 3142 . - . ID=g4644;Name=g4644.t1 NODE_112_length_38911_cov_41.3553 . mRNA 11 3142 . - . ID=g4644.t1;Parent=g4644;Name=g4644.t1 NODE_112_length_38911_cov_41.3553 . exon 1935 3142 . - . ID=g4644.t1.exon1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . CDS 1935 3142 . - 0 ID=cds.g4644.t1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . exon 1549 1717 . - . ID=g4644.t1.exon2;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . CDS 1549 1717 . - 1 ID=cds.g4644.t1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . exon 1116 1200 . - . ID=g4644.t1.exon3;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . CDS 1116 1200 . - 0 ID=cds.g4644.t1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . exon 756 988 . - . ID=g4644.t1.exon4;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . CDS 756 988 . - 2 ID=cds.g4644.t1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . exon 11 366 . - . ID=g4644.t1.exon5;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . CDS 127 366 . - 0 ID=cds.g4644.t1;Parent=g4644.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 11 126 . - . ID=g4644.t1.utr3p1;Parent=g4644.t1 #PROT g4644.t1 g4644 MSSSTKPKQKDKGKDKVRDNDRAGGNGRERERSRSGGSVSGTMRDPSSSRDGRRTDDDSSDPPRGASRQHRRDSLYNVCEMFPQFEPAFIIHVVQSNEGDVGRSIDILTDLLDAGDAFSNLCAIFGQLDPGVVQDTLAAHRGSLPKTTKALLELADAVSPRQLASSKSISSGVDDIPQVTTTTGDGRQRQQRPQRAGSTRTEPGLDAVERAETRLAVELQEDMLARLLGSGAAGEDEDDEDGGVYEDSFMPDRRRQGISADSDEQYGSMRRSTAVDTGNRRGSHVSGGDEGQYDDEDDAMDAAHHDESESDGPPTDNSGSQYARSYRGTGPSQAKGASGTRPARVDENVRMGGSSGGGMLPPGRLRGRGEGDAHDEDDEGVGGDGDGEADGDVDGDGDGGNYGEYNPDEFANLPVSSEIRELFEFIRKYNPIPYDPPTQLRCFIPDLLPAIGDIDPFVKVDRPDGVDKLRLGLLVIDEPAAKQADPTALDLTLRALSKNLSAAPVLVRSIADAGKAPQSINEWIRNVEAVHKTKPPSEVVYKRPMPDIEGLMQPWPPEMEEMLESLSVPSSELNVSLSDYTKILCAMLDVPFRENALVESLHVVFTLYSEFKDSHHFRLVRKNSLMQRMTVGKFERNITPPLHK* # PASA_UPDATE: g4648.t1, single gene model update, valid-1, status:[pasa:asmbl_493,status:3], valid-1 NODE_112_length_38911_cov_41.3553 . gene 12082 15253 . + . ID=g4648;Name=g4648.t1 NODE_112_length_38911_cov_41.3553 . mRNA 12082 15253 . + . ID=g4648.t1;Parent=g4648;Name=g4648.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 12082 12388 . + . ID=g4648.t1.utr5p1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 12082 12439 . + . ID=g4648.t1.exon1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 12389 12439 . + 0 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 12688 12798 . + . ID=g4648.t1.exon2;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 12688 12798 . + 0 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 12931 13216 . + . ID=g4648.t1.exon3;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 12931 13216 . + 0 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 13590 13812 . + . ID=g4648.t1.exon4;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 13590 13812 . + 2 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 13926 13989 . + . ID=g4648.t1.exon5;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 13926 13989 . + 1 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 14170 14448 . + . ID=g4648.t1.exon6;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 14170 14448 . + 0 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . exon 14629 15253 . + . ID=g4648.t1.exon7;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . CDS 14629 14796 . + 0 ID=cds.g4648.t1;Parent=g4648.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 14797 15253 . + . ID=g4648.t1.utr3p1;Parent=g4648.t1 #PROT g4648.t1 g4648 MTDAKGNKIIVLDNGTGFVKVGYAGSNFPAHIFPSMVGRPILRTDANPGDVVIKDIMVGDEAAAVRSMLEINYPMDNGIVRSWEDMQLVWDYTFSEKLKVDTRNTKVMLTEPPMNPRKNREKMIEVMFEKYNVAGCYIAIQAVLTLYAQGLLTGVVVDSGDGVTHIVPVYEGFALPHLTRRLDIAGRDITRYLIKLLLMRGYAFNHSADFETVRQIKEELCYVGYDIDQEQRLARETTVLVEEYTLPDGRSIKVGQERFEAPEALFQPHLINVESPGVAEMLFNTIQAADIDTRSEFYKHIVLSGGTTMYPGMPSRLEREMKQLYLERVLKGDTSKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWITREEYQEKGLKCLDKLGVQA* # PASA_UPDATE: g4645.t1, single gene model update, valid-1, status:[pasa:asmbl_491,status:12], valid-1 NODE_112_length_38911_cov_41.3553 . gene 3909 6213 . + . ID=g4645;Name=g4645.t1 NODE_112_length_38911_cov_41.3553 . mRNA 3909 6213 . + . ID=g4645.t1;Parent=g4645;Name=g4645.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 3909 3950 . + . ID=g4645.t1.utr5p1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 3909 4019 . + . ID=g4645.t1.exon1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 3951 4019 . + 0 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 4154 4240 . + . ID=g4645.t1.exon2;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 4154 4240 . + 0 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 4383 4467 . + . ID=g4645.t1.exon3;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 4383 4467 . + 0 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 4647 4757 . + . ID=g4645.t1.exon4;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 4647 4757 . + 2 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 4931 5053 . + . ID=g4645.t1.exon5;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 4931 5053 . + 2 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 5261 5445 . + . ID=g4645.t1.exon6;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 5261 5445 . + 2 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 5593 5663 . + . ID=g4645.t1.exon7;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 5593 5663 . + 0 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . exon 5848 6213 . + . ID=g4645.t1.exon8;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . CDS 5848 5914 . + 1 ID=cds.g4645.t1;Parent=g4645.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 5915 6213 . + . ID=g4645.t1.utr3p1;Parent=g4645.t1 #PROT g4645.t1 g4645 MASARIAVSESDGVMTIRLNRPKKFNAIDRDTYADIVAALKTATTKDDISVVVLTGAGRYFSSGNDFVAMFEQAKGLSDISGFQSLLTEAMGDFQNFVDCVIEFPKVLIAGVNGPAVGIGVTILALCDLVYASDNATFSTPFTKLGLCPEACSSVTFPACMGRALASDVLLAGRVLTATEAAQCGFVSRVIPSGAFDAELTARAKDVASRPLQSLMASKKLCTEHRIRELKEINAREVKILNERWASEETLSEIVKFATRKSSKL* # PASA_UPDATE: g4646.t1, single gene model update, valid-1, status:[pasa:asmbl_497,status:12], valid-1 NODE_112_length_38911_cov_41.3553 . gene 6118 7680 . - . ID=g4646;Name=g4646.t1 NODE_112_length_38911_cov_41.3553 . mRNA 6118 7680 . - . ID=g4646.t1;Parent=g4646;Name=g4646.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 7563 7680 . - . ID=g4646.t1.utr5p1;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . exon 7421 7680 . - . ID=g4646.t1.exon1;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . CDS 7421 7562 . - 0 ID=cds.g4646.t1;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . exon 7095 7139 . - . ID=g4646.t1.exon2;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . CDS 7095 7139 . - 2 ID=cds.g4646.t1;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . exon 6772 6908 . - . ID=g4646.t1.exon3;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . CDS 6772 6908 . - 2 ID=cds.g4646.t1;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . exon 6118 6384 . - . ID=g4646.t1.exon4;Parent=g4646.t1 NODE_112_length_38911_cov_41.3553 . CDS 6118 6384 . - 0 ID=cds.g4646.t1;Parent=g4646.t1 #PROT g4646.t1 g4646 MSRAAFVLLFAVAFVVCIAPSDAGFCGCGYGRCCTNSFFTTCTSCYKGDWYGPYGAYCSITNVWEYEGDCTTKVGAIVGGVIAGVIALIIIVGCLVACCRSGSRYHYTNYWTSSPAVTTQATVLTPAGGYVTTTPGVTVAGAYVPSYTEQYPAGAAPPPYYPQGQYPPQQGYPPQQGYPPQQGYPPQQGYAAPYPQ* # ORIGINAL: g4651.t1 original gene structure, not modified by PASA NODE_112_length_38911_cov_41.3553 AUGUSTUS gene 35449 37652 . - . ID=g4651;Name=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS mRNA 35449 37652 . - . ID=g4651.t1;Parent=g4651;Name=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 37530 37652 . - . ID=g4651.t1.exon1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 37530 37652 . - 0 ID=cds.g4651.t1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 37082 37377 . - . ID=g4651.t1.exon2;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 37082 37377 . - 0 ID=cds.g4651.t1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 36531 36650 . - . ID=g4651.t1.exon3;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 36531 36650 . - 1 ID=cds.g4651.t1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 36164 36180 . - . ID=g4651.t1.exon4;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 36164 36180 . - 1 ID=cds.g4651.t1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 35944 36020 . - . ID=g4651.t1.exon5;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 35944 36020 . - 2 ID=cds.g4651.t1;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS exon 35449 35526 . - . ID=g4651.t1.exon6;Parent=g4651.t1 NODE_112_length_38911_cov_41.3553 AUGUSTUS CDS 35449 35526 . - 0 ID=cds.g4651.t1;Parent=g4651.t1 #PROT g4651.t1 g4651 MASLQRATAVLFDLDGTLLDTEPLSDLAMESVLRRFNDSHRMTWDIKRQILGMKGVDWGPIVLKHFGLESQLTVDEIVKGWEEDFKKRYATARVLPGVHKLTAHLYRHGIPIAICTSSNGHTVTLKYHASPPLFDRFVGRIIAGDDPRVVRGKPHPDIFLAGAALLGVDPADCLVVEDAYTGFCAGIAAGMKVAVVPDMRLERSVFDGAHLILNSLDEFDPEVFGLPPYPNDAAPQ* # PASA_UPDATE: g4652.t1, single gene model update, valid-1, status:[pasa:asmbl_495,status:12], valid-1 NODE_112_length_38911_cov_41.3553 . gene 38211 38875 . - . ID=g4652;Name=g4652.t1 NODE_112_length_38911_cov_41.3553 . mRNA 38211 38875 . - . ID=g4652.t1;Parent=g4652;Name=g4652.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 38834 38875 . - . ID=g4652.t1.utr5p1;Parent=g4652.t1 NODE_112_length_38911_cov_41.3553 . exon 38211 38875 . - . ID=g4652.t1.exon1;Parent=g4652.t1 NODE_112_length_38911_cov_41.3553 . CDS 38273 38833 . - 0 ID=cds.g4652.t1;Parent=g4652.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 38211 38272 . - . ID=g4652.t1.utr3p1;Parent=g4652.t1 #PROT g4652.t1 g4652 MKGNRLQRPQHCPDDMYDTMMSCWAADPLDRPSFALILASFEGFGIRRSHPPGGNAPPSLPPPPSISRGNVHGDKDKNNRSTATVVKTGGKYANFTLGEVDDTTARIAESPSSVLRVVKDGALKGRNSSLASDASAYLSLDLAEIVHETPETPRYAYDDVAAEMTNVTDGCYGAALSGPVVGHSDI* # PASA_UPDATE: g4647.t1, single gene model update, valid-1, status:[pasa:asmbl_492,status:3], valid-1 NODE_112_length_38911_cov_41.3553 . gene 8728 11469 . + . ID=g4647;Name=g4647.t1 NODE_112_length_38911_cov_41.3553 . mRNA 8728 11469 . + . ID=g4647.t1;Parent=g4647;Name=g4647.t1 NODE_112_length_38911_cov_41.3553 . five_prime_UTR 8728 8971 . + . ID=g4647.t1.utr5p1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 8728 9028 . + . ID=g4647.t1.exon1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 8972 9028 . + 0 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 9187 9310 . + . ID=g4647.t1.exon2;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 9187 9310 . + 0 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 9506 9612 . + . ID=g4647.t1.exon3;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 9506 9612 . + 2 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 9778 10025 . + . ID=g4647.t1.exon4;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 9778 10025 . + 0 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 10323 10806 . + . ID=g4647.t1.exon5;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 10323 10806 . + 1 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . exon 11020 11469 . + . ID=g4647.t1.exon6;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . CDS 11020 11262 . + 0 ID=cds.g4647.t1;Parent=g4647.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 11263 11469 . + . ID=g4647.t1.utr3p1;Parent=g4647.t1 #PROT g4647.t1 g4647 MGYSDDDDDDAPMMVDKRKTKVVTNQPFDEALDVSEGDDIMSSASSPMQKHEAPRGGHARGRNVRGDTPPEPLSDNEDDDEYGEEEEEEEDEDMPKVPSRPKPADARAPQGLGSLGGGGQPRGLGGQPRGHAGMYAGDGDDEEDEEHSQRSHATDEEGHGEDDDGEGEEGESKSQPVERGYDPEEYKHLPVSSEIKELFQYITRYMPITLDLDHRLRPFIPDYIPAVGDIDAFVKVQRPDDKPSSLGLTVVDEPCAAQSDPTVLDLQLRTLLKQASAQPMSVRSLEHAEKNPKQIDGWIKSIAELHRQKPAATVNYSKRMPDVDQLMQEWPPEFEDMLKSLSLPTADLNVDIKQYVELVCSILDIPVYKSKIESLHLLFSVFSEFKNSQHFKQREAAEDEVRGGSNNDRIVRSVSPTPSS* # PASA_UPDATE: g4649.t1, single gene model update, valid-1, status:[pasa:asmbl_498,status:12], valid-1 NODE_112_length_38911_cov_41.3553 . gene 15385 31650 . - . ID=g4649;Name=g4649.t1 NODE_112_length_38911_cov_41.3553 . mRNA 15385 31650 . - . ID=g4649.t1;Parent=g4649;Name=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 31547 31650 . - . ID=g4649.t1.exon1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 31547 31650 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 30935 31292 . - . ID=g4649.t1.exon2;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 30935 31292 . - 1 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 30574 30729 . - . ID=g4649.t1.exon3;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 30574 30729 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 26321 30424 . - . ID=g4649.t1.exon4;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 26321 30424 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 16321 26082 . - . ID=g4649.t1.exon5;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 16321 26082 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 15914 16168 . - . ID=g4649.t1.exon6;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 15914 16168 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . exon 15385 15742 . - . ID=g4649.t1.exon7;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . CDS 15641 15742 . - 0 ID=cds.g4649.t1;Parent=g4649.t1 NODE_112_length_38911_cov_41.3553 . three_prime_UTR 15385 15640 . - . ID=g4649.t1.utr3p1;Parent=g4649.t1 #PROT g4649.t1 g4649 METDGRIRWAESRVISSLRPRPEDVKFMLNNEESRQQLLLFFSSEGWKRLIVYYDANQRLVATTQLPSKLTQKGVIFLKGRAGVITDDNVNDEVQYCDFLPQALLELHTLAHQVYLPLLSNPENQRGWEDDAAKIIDACQKFAAAAYIALGQTKGETLLPMPAPGILQYFENGGAMATGDKPKSNKEKDRIHVLETTVVTWTKLIKHVLKSDAETLTKSGQNPGPMAVINFWQYKCTNLASLSDQIRSDSIQRILRILDATKSTYSSAFLRVCKDIVQAQLQARSIVTYLVALVPLFEKLSGDDAVSYEALVEVFPPLMHTLYLVWMNCKNYSTQGRLSQLLRLICNDVIARTRTFVDGRNVLFLPMGEAHATLKTALRVCATFRGSYHDYKLMTDEHLERLVEQEKADQLGSGIPGASLSIDAAQYDRRERPSPWPARSSHAFQRFNMFIDRLHDLMDFSQTATHFARLEGLELGGPAGKALDGLMEGIHSEFNKQHDQLLPGIRAVDALDVDAENSRRVDESFYKFRTGVKDLERRLAGVVRGAFESSNTWVGWLRLLDVFDGLTGRDVVQQMLEDRFHLVMKAYRTEMQAVRKEFHEYQSKTPPVHHQLPPISRALRWARGLRERVELPVSRIKLLSKNVLDSDDGKDVMQELQALVGEFEKFEGEQQARWMHAAEGVTQQRLKVPLLIRDETAPDVGSDGSVSGAASLSSRGKVRVNFDRELVVLMQEVRHLASMEVYIPEGALAMHRKWDQLHALMSSLEMVCDVYNWMEESVLPVERPLFRRQLDDIAALLQRGLEELNWKSYGIHDFINDAQMLIVNDVHKVMSAIRANYVRIQHIVASWKNGAGGLFGKREPGKTYPVTKFAEEHRAFTAIHNYEVTESGAQIHELLVSINTALGISSGAPAWKVYVDHVQHMILDGLADAASTALGLMIEGLESSTASSSAYGVGTKEPLLEIKLELVAPVVIFNPPLDSSTGRNSLRETVLDWVEACMNVARLVPRVDGSGGDYYADTASSKIVEQLVHRITRVVDENNGRCRNFQDTFASGFSFLWTSDINASFADFMSGSNSRRPTKSARPPSELKRERSQLSNIAGFRDTAGTSVGTHGGSEGMSSQSMAPSLEEFDARMSEYKTIQDSVSELSNTCNIGWVRINAKPIKQALGTSCTKWIFSFTKHLMDQVVGSLDQTDLFIERIEACIDERVADGDVAAFLRVMGIIREFRSKMEVIDRSFSPIHRTIGVLRKYGYLLPDDKFNVYKESPARWAALKKRVVAAKERLAPRMQLEAERMSKDLNKFSEATLRFRERFLAEAPFGSEWVVDDAQRAIVRFTDAVARMRKESRELMELQELLDSAVNTFGDINDCHEDLRLLTAMWEAVKKVRVELASWHPQMWTAVDVEAMIESSEEMLDVVGHLPKACREWGAARDLVAHVGALKDVAPLIEHLRCDALRERHWKQLQRATGILILKGDTVGELLARGLPGSESVVVDIVTRAKKELAIERTIKEFEDTWLSKTLDFHRSQSVHDGTSSDVGMSLQAGRNRMDDSRMDIARRKQGGKAGEHRLARNAPESDDLYVLSDPGTLFDTLDSHLVTLQSIRANRYLPSFADEVSKWEKRLQTLDIALRTWMSVQEEWVQLEETFLGASEMSEELRVSLVQDAVLFGSIDREWKELMRAAFRKPNMIELCCREGFVHSLEQMHQGLEHCRRSLKRHLDRKRSAFPRLYFVSAEDILRIVCHGPVPSEINPFLPTLFGNVSSIRFDAGDNTSVVAQGAPTAALSRVALGVYSGEGELLKFLAPSQCVGRVEVWLSSLSSAMRDAVKAAISEALASPPQEEETLLKWSGDRLSQAAVVASSYHVTSLVEKAFRDIIDSNSKDAMQKCLNTVKERLATISASLSSEDLSSLPRAKARALALVLCHARDVVADLVAAEEKGAECFRWQSQLRYVVQSESGALAAAICGETLPYGYEYFGASDRLVMCPPTEKCCVGIILAHASNSAAALVGPATCGKTQTARDLGHALGAPVYTLGCSSSTDYRALVEMYRGMACTGAWVCMDEVDMVGVSVLSAASTVIRAVLDAGRAKLDSFSFFGEELKLVQGGCCVATINAPEFLDGLPASTRSLFRPVMCVQPPLDVVAEAMLLVAGFDAESSILARRLSLFYDLARQVFRWSPESLDWSLNAARGVLAAAAHRRRACGSESGNTILAASVKLYHLPALTAGDASLLTSLVSDCFPGTDDHVGPVPGEGGQLEHALREAAAELNLVPKPSFVQRAIELDRLLNTRHAVYVVGPPACGKTSLLRILALAHAKLGRPTITRTLHPKALEPKDFLGHVNPETREWTDGVLSAMLRRFADERRANACEMRWVVLDGEVDTEWTSALASAMGPERALYLASHERIPIRGDTRILIETDSLGNAHGPCVSRAAVLRMTAEDVGWPIAAASWIDAFGDDQQREVLRPLIADYVPRILSFLRDRHSSPFVVPTPEISLVTTLCTLLDALMPELCPRGSTVACIESVFVYACVWAFGGLLSDEARQPAGTDVSESPRAAFSAWLRSTFGGRVQLPEGAECWDWHVGPGSHGLSVISSAAVFTPGSASHNSDVFIPTAGTERMGVLLNALVAAGKPVMFIGVAGTGKTSFIRERLRTYCSGDDILSTTLTVNAFTTARSLQASLEQSFERSPTRAHGPPDNKQLVCLIDDLHMAAEDAHGNRSVDALLRQHIDQGGFYDYEVRSLREVRNVTYVFGVNISKGAPYKISPRLQRQVAAFYVPYPCAEELHSMFSAVLTGYGSEVGVGAATGDIANRLVSASVELQARVRASFPATRERPHYVFTLRDLGIVIRGLCFCRPSYCDAVDDVRLWLHESQRVYGDRLASATDASVFHHILYETARKYFYDFDQQALLAKPLLFTCLAVSASTTSAPASGSSSSGASGPPREDPHFQSITNYGLLRLVIADRLAEYNADGGRRMDLVLLDEVLEQLCRLIRVFRFPGDSGNMLLVGVGGAGKQSLARLAAYMCGFQTHHLSAGSGYGLAEFRSELVSLYIRTGLKGERIAFLIGESQLAEEGFLVYINDFLASGFIADLFSAEEKNDILIAIRAEVKHAGLLYKRDVAWDYFIGKVRRNLRFVISMSPGPERFAQRCKMYPALVSSTTVIFCQPWSKQSLISMAHHHLGDADVGGAETRENVAHLMASIHLSVSDATDHNDPLSVNEFTLANHRSYLDFIGRFVQTVSRRKQGIRAMQTRLEGALSRISTITSGVAQMRAQVDQEKSLMLEKKQGTEKLLAQIGQDMALVEEQKALAVQEENRLVQLESEASQHAVAYENEMSAAETYAKAADGALGRIDRNHLAELRAIQKPPHDVAELLAAFVLLTSTSKGTPPDLSWAGARKALANGDRFIDAMIKFDRKEIPEHNMAAVQPYVERASDAIRSGSMMDAEEMAYKPTVLALREWIVNVVGYSGLYVKAAPVLQRLTQAKDALELSKAKITAIHSKVKELESRIKGLAVSFEKASSEKRQQSRQLEKTNEQLAGAERFLQVLAGESAKWQARLDSLRTREITLIGDLVAAVAYVTYLAPLRQSARHRIVRDSWIPDLVERGIPCRLCVVGGGGAVSDVQMEQWVGDLVELVTATEGEDGMVGAEAGPKPHPSASRGKSDKGCALADENIALLQTCRRWPMLIDPHGHGVEWIRRHEASSGLFVVDAASGLVDASILETAVTLGKPMLVINAGNSLDRLLLSLVTQTQPPRSTETAPEQSSSVTVAGVELERAPGFRMYLCTRNARPQFGQEVLSVTSLVDCRTSPVALERWLIHHIFEQENSPLHARLAEIESQRGQHEARLAETEERLLAHGLGDDAKKDANGRETGVVSRASLASPSHHVLRQGQSVAAAVAAVAAHGRLSIVENFASGGARDLTSNAMLEMEATIREEDEENGAGQDSISNAVVTKQAETETLETLATEYRTIVRLRELYRPLAERGAALYFAVDALNALGPAYACSLDATVASIDEALKSVQKTPAAVTVTGEVAVAVDGGQQLSVADAKDAAERAAVCARVELLLLAAMLSVFRRASLGLMEGDRLLFAIHLACVCGKEATPAQSAAYNAEVPLLLNGPKAPTLLVVPPMPKDFCDWLTSDAWADLYVLATSVPKHSALLKSIRDNPAAWRDWRLCAKPEEKPTPVEADETLAPHVTPLHRTLVIKCLRPDRLVASLTALVARRIGPDFVALPGVPALPGGGDAATPVVILCPSDADCAPLVTSLNGGRTPTRISLGLGRIEDAEAIIESCSAKGESVLVDAVHVAPHFVASLERRVQTWISVPPNGKFRLFLSADPARIPDTLASSLASLSVVVSGEPQRNLRGALLTALAVFEAQQFEGAFSSSQRLMRIAIGLSLMHALLRTRRRFGRQGMSRDHLVGETDLLSAGRMVLSMPSDGRWSDLRGAVCDVVYGGHFTDGWDRAMCRGYAELYLREEIMRPDWQPLPHLAVPSGDSATLKQFATNVEASLTGDDVSAFWGLPQGAGLRAGKALGMRVLASLISLAEGQDAHAHPTACGGQQDAGRPMTGTVARQWGRQVQKTASTQHTASSASTTSVGTVVSSGDVASSSLTSVPAAAHVTRAGAESHRALPLERIRSLVDATLERLPVPSTLNVDRSFMPRLAVRPLSPKMSSTSQPQTPNGSTKPPSQQQLQQQQQQQKAQRRPKRSAVVQALNRECERMIRVLGVARSSLESLDACLVGTVPMHHSARVLLDALSAEQTPTEWLEASGMTERERVNLHAWMDGLVRKHALLNFWVTSHALPRVLPLAELFDAGAFLCAYTQDQARAMNVALEEVELRVELTDKHNPQELRGVSANHGLFVTGMFLDGARYEDGRLREQTTMDRPQPLPFVRMTVVKRDADAPKKPADGVFNCPVYTTRGRAHQVLTVPLKTDGSAAHTWILSGTAILLCVD* # ORIGINAL: g4303.t1 original gene structure, not modified by PASA NODE_2759_length_5205_cov_29.4651 AUGUSTUS gene 10 4653 . - . ID=g4303;Name=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS mRNA 10 4653 . - . ID=g4303.t1;Parent=g4303;Name=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 3379 4653 . - . ID=g4303.t1.exon1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 3379 4653 . - 0 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 2545 3055 . - . ID=g4303.t1.exon2;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 2545 3055 . - 0 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 2098 2210 . - . ID=g4303.t1.exon3;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 2098 2210 . - 2 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 1480 1693 . - . ID=g4303.t1.exon4;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 1480 1693 . - 0 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 1100 1212 . - . ID=g4303.t1.exon5;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 1100 1212 . - 2 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 713 859 . - . ID=g4303.t1.exon6;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 713 859 . - 0 ID=cds.g4303.t1;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS exon 10 378 . - . ID=g4303.t1.exon7;Parent=g4303.t1 NODE_2759_length_5205_cov_29.4651 AUGUSTUS CDS 10 378 . - 0 ID=cds.g4303.t1;Parent=g4303.t1 #PROT g4303.t1 g4303 MGVSVSKHSKPAYSEQPPPNTAAHNSQGTAAPHTTASASTSNGNKMADSNAPRLPQLSTSRTASPQLHKTPSTLSSSTPLSGQQKRPESSNGRDATVTAPVKHDGASGDADARALSSLSRSSSKSAISVSSKSESRPRQLAPLEPQSHASPGTAGHTTSRLDTAAPALPNIADKYVLLSPFIASDVAIPPELDFTGKAKLPLTAEGLMGGGIKERYEAWKAGAWMTLWVFISSTFVDMHRERDVLLKATFPELNKRARARRVRLVPIDLRWGITREEAEHIGAVELCLKEIERCRPFFVCLQAQRYGYCCDDYKVADPRFDWVSHVPPGRSVTEMELIQMFLRNPDEQSASFTYFRDESSLAAVPEDVRHLFADGKDDMVASLKRRVLAHPYCRSQSYTCDVAVTPSDCASQKDFVGVREDLHAKVLADMWGVVDLCFPESLTHGTAHGGVDPVVEERAAHHIMVESRSRFFVGRVAALSDMSSKMQFGHREGKGGVLVLTGAPGSGKTAIMAALANGRAFGPEDSDAFVFSHFVGVTPSSSDVLRMIVRMCEETKRHFGFEFEVPTQAKDIEFAVAALFARLALHGGKVLFVLDALNQLDQSTEAKSLHWLPESIPPNVLVVISTLEGPILKALMARKHEGTVMHMLPLSEDEKTEIVSLVLKDASKKLDASQMKCLVNKKEASLPLYLVIACEELKLFGDFGWTVPGMFEHILRRLENEHGHNLVKRAFSLIHSSRHGIRVDELLTLLAEDGQPQLPYSTWARLFNGIEAYMRPTRTSGEGVLDFFHRQIAKAVERLFVSDAESKHQCHRAIASFFLTQHSAGNRRKADQLPFHLQRCNDFHGLRDALLDIDLFLQLATDDDSFMELMAYWAAVTKELPDTDMGLLYRAAVDAYIPHTDGTSNATISHICRR # ORIGINAL: g8415.t1 original gene structure, not modified by PASA NODE_471_length_23138_cov_43.6178 AUGUSTUS gene 17888 22674 . - . ID=g8415;Name=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS mRNA 17888 22674 . - . ID=g8415.t1;Parent=g8415;Name=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 22404 22674 . - . ID=g8415.t1.exon1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 22404 22674 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 22258 22315 . - . ID=g8415.t1.exon2;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 22258 22315 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 22072 22168 . - . ID=g8415.t1.exon3;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 22072 22168 . - 1 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 21777 21849 . - . ID=g8415.t1.exon4;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 21777 21849 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 21486 21589 . - . ID=g8415.t1.exon5;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 21486 21589 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 20947 21133 . - . ID=g8415.t1.exon6;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 20947 21133 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 20577 20687 . - . ID=g8415.t1.exon7;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 20577 20687 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 20330 20436 . - . ID=g8415.t1.exon8;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 20330 20436 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 19838 20126 . - . ID=g8415.t1.exon9;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 19838 20126 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 19664 19710 . - . ID=g8415.t1.exon10;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 19664 19710 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 19246 19434 . - . ID=g8415.t1.exon11;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 19246 19434 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 19052 19079 . - . ID=g8415.t1.exon12;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 19052 19079 . - 0 ID=cds.g8415.t1;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 17888 18897 . - . ID=g8415.t1.exon13;Parent=g8415.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 17888 18897 . - 2 ID=cds.g8415.t1;Parent=g8415.t1 #PROT g8415.t1 g8415 MIRTVEERKQWPRDFARHYADLCSIHNVCPIESVRTGAGELAISARLDRLTTADTVPLFAAIARDVSLRQVSLESLYPRGPNKRKLLLLNGGPAKKPPICDPDIANQLCRSLGSCLAGSLSLLDLRVDNIKLHLRDIKALHAGLKKNLTLRSLVITNCAIGDAGLELLSSAIRNHRYLRLVDISGSKLTSKGGLVIAGIIKHQLTKSPAEAWALTLRQGASSQGRTGAPSCTLRHIIAANNPRLRDDGASVIAEAIADDKSVIALDLRSCGITDVGGRQLRGALQMNLTLRVLDLRGNLMSQQVRDDIAAQLRHSRHNEGDVRALGDRRTSDSLDASDLDWIPPEYARLLSQRVPASQSPGKGDSCDMERRPIHNQHDHVPFMLQHSEGYRPDEKTHSRQGGAFNMLGLPAANLAPRSPARLVYAGAELPLGETFTVANGFQSQVREERPRSPVAQPHARDQQPLLSLERRLAQSESARIAAEMRVLELEAENERMADEMRRAGLRLKAREPMMTVESLLAGTWDPSMLKDKETTSLLERAFREFRRAMDGLAEPTASSSGHVMRTPSEARESDTLPGWLPSRVTNSTADNVTHNTAFLEELATGARLPTVGSQNRQSDAAAQHTRRAGTSKTPSQSVLPPAHGDAKRTEQEGGATAMSSFSSQRSHKKDSPGSSTVSANSGHSSSRLGGAIAHNFDEYFGAGNVSGELKGSASDGSERSSQASRESGASRASRESGASRASRESGASSASSAAPRGGKRIGGAITRNFDDFFGKEDAASGDEHGDLGEDHEQKESDRDEGDESDGAARREDGEERHSSYGNDNDWESAEGEDDSVEGDSAEESNGDEYASAESED* # ORIGINAL: g8411.t1 original gene structure, not modified by PASA NODE_471_length_23138_cov_43.6178 AUGUSTUS gene 70 2234 . - . ID=g8411;Name=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS mRNA 70 2234 . - . ID=g8411.t1;Parent=g8411;Name=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 2096 2234 . - . ID=g8411.t1.exon1;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 2096 2234 . - 0 ID=cds.g8411.t1;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 798 1954 . - . ID=g8411.t1.exon2;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 798 1954 . - 2 ID=cds.g8411.t1;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 457 612 . - . ID=g8411.t1.exon3;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 457 612 . - 0 ID=cds.g8411.t1;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 70 294 . - . ID=g8411.t1.exon4;Parent=g8411.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 70 294 . - 0 ID=cds.g8411.t1;Parent=g8411.t1 #PROT g8411.t1 g8411 MSAPPDSSADLPVRIDLAEIRDALEDEDDNVPPPKGETWVTALNVPEEAPAVGESVDAPAPKSKANAHWKKATAMAHVISKLQAIDHKIKTDGAIAKEDTDWEQYYPQIEDTKPAYIMLPSHPFLRYWEIVLVILLAYVAIVLPFRIAMLYGSSGGWLAVDITVDSLFVVDMILIFFSAYEEERTRKIIVDPKKIARRYLLSWFIVDCIATFPIYAFDSSSDSLNKVARFARLPRLIKLTRLLRLVKLARLFRVQEFLRRAQNYFRLSLSFRRLAKFVFWVIILVHIAGCIWVFIAHYDDYGIDTWAYRYGLHLNSTTVEQYTSGIYWAIQTVTTVGYGDQSARNTGERIFAICMMMVGASFFAFCISNMSALVANMDNESMKQKKKLEILGEFLRDANLPDSLNVKLIQHFDRQGDNVSLTYKQREFIWNEMSPALRVEIAHEMYKDLIAKVSLFKGKDPQFIADLVRNLHPMTTEANDVILEEGEHAHDLYFLSYGRLEVWHSSQEKPLRNLVEGSYFGDEILVSDDHQFTIKALTPCELFYISRKALLKILREYPK # ORIGINAL: g8413.t1 original gene structure, not modified by PASA NODE_471_length_23138_cov_43.6178 AUGUSTUS gene 8284 12940 . - . ID=g8413;Name=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS mRNA 8284 12940 . - . ID=g8413.t1;Parent=g8413;Name=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 12610 12940 . - . ID=g8413.t1.exon1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 12610 12940 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 12284 12504 . - . ID=g8413.t1.exon2;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 12284 12504 . - 2 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 12068 12161 . - . ID=g8413.t1.exon3;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 12068 12161 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 11851 11917 . - . ID=g8413.t1.exon4;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 11851 11917 . - 2 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 11495 11564 . - . ID=g8413.t1.exon5;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 11495 11564 . - 1 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 11073 11177 . - . ID=g8413.t1.exon6;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 11073 11177 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 10679 10858 . - . ID=g8413.t1.exon7;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 10679 10858 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 10446 10544 . - . ID=g8413.t1.exon8;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 10446 10544 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 9635 9912 . - . ID=g8413.t1.exon9;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 9635 9912 . - 0 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 9272 9417 . - . ID=g8413.t1.exon10;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 9272 9417 . - 1 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 8968 9084 . - . ID=g8413.t1.exon11;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 8968 9084 . - 2 ID=cds.g8413.t1;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 8284 8765 . - . ID=g8413.t1.exon12;Parent=g8413.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 8284 8765 . - 2 ID=cds.g8413.t1;Parent=g8413.t1 #PROT g8413.t1 g8413 MAFTPKGQKRPRDGEDEKASTPPSKRVKPSPESKGKGNGAKVFKGSKRPDAAKGGKAMHGGKKPGRGGDRPNRPLSAGGKSPKAHASKPRKQEVDGDDESEPMEVDGQDNDTTKSPKEKRKIPANHKEAKELKVERKIAKNPSYEVLGKAKQIWEKIRQKTLAAKERSALIDQLIPLVEGKVSDIIFKHDAARIIQCVLKYGTAQQQKDILKELDGRILELVASKYARFIIKTSLKHGSKEQRSRIIASFYGHVRRLIKHKEAAPILELAYSDYASGKERASLIEEFYGPQFTVFKTEERRTIADIFAANPEKKPYVLKHLSSALSGVLTKGIISHSIVHKALADYFLHATGNDRKEMIDAVKELCVEILHTKDGARVAMECLWHGSPKDRKAEIKAMKGFIVKICKEEFGHAVLLAAFDSVDDTVMIGKTILPEIAAAAKELLDDKYGRRVLLYLLAPRSKTLFPNDTLETLACGDGNENSKKAVEARQGELRALASPWLVSLASENAREMICDVLQVQLLVEVALHATGNGEVLGAIAALADDDDLLEHEVAHRAFKRLAKEHVPADGSRSFASLLLERTRDRLSDLALNKRSAFVLVSLVESQDATTAEDAKAELIAHLEDIVKEDNPGSKLLATVLSGKPADAPKAKGATAKAPVAGGKNGTAKGSAAVATPVKQVATPTPTPTPAKSTPAKEVAAASTPKQAGKGAATPRKANAGSASAKKTPK* # PASA_UPDATE: g8412.t1, single gene model update, valid-1, status:[pasa:asmbl_7562,status:12], valid-1 NODE_471_length_23138_cov_43.6178 . gene 4122 8018 . + . ID=g8412;Name=g8412.t1 NODE_471_length_23138_cov_43.6178 . mRNA 4122 8018 . + . ID=g8412.t1;Parent=g8412;Name=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 4122 4139 . + . ID=g8412.t1.exon1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 4122 4139 . + 0 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 4239 4351 . + . ID=g8412.t1.exon2;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 4239 4351 . + 0 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 4455 4549 . + . ID=g8412.t1.exon3;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 4455 4549 . + 1 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 4683 4801 . + . ID=g8412.t1.exon4;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 4683 4801 . + 2 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 5073 5221 . + . ID=g8412.t1.exon5;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 5073 5221 . + 0 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 5328 5463 . + . ID=g8412.t1.exon6;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 5328 5463 . + 1 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 5600 5832 . + . ID=g8412.t1.exon7;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 5600 5832 . + 0 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 5991 7613 . + . ID=g8412.t1.exon8;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 5991 7613 . + 1 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . exon 7856 8018 . + . ID=g8412.t1.exon9;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . CDS 7856 7958 . + 1 ID=cds.g8412.t1;Parent=g8412.t1 NODE_471_length_23138_cov_43.6178 . three_prime_UTR 7959 8018 . + . ID=g8412.t1.utr3p1;Parent=g8412.t1 #PROT g8412.t1 g8412 MKFGFQFSNLCGTVYKQGNLIFTRDGNSLLSPVGNRVSVFDLVNNKSYTLPCESRKNVSILALSPDGHLLIAVDEEGYALLINLPKRSVLHHFNFKEKVDDLKFSPDGKYPPDRFRTHFVVTHGKRIQVWHSPSIGKEFAPFVLHRTYAGPYDEVVSLDWSPDSRYFVAGCRDLTARMYSVDPIDGFVPVTMSGHRDVVVGVFFSANGEEVYTVGRDGALFVWSKTAVSADGASSSWRITAKHYFNQSHARVVSASFHPAGRLLVVGFTNGVFALYELPEFNMIHSLSISQHRVSTVTINSTGEWLAFGCASLGQLLVWEWQSETYVLRQQSHAGEMTALAYSPDGQTVVTGGEDGKVKAWNTTTGFCFVTFSEHTGSVTAVSFAAHGNAVFTASMDGTVRAFDLVRYRNFRTFTSPSPTQFSSLAVDASGDVICAGSLDTFEIFVWAVQTGRLLEVLTGHEGPVSGLSFAHNRSLLASCSWDKTVRFWDVFEGKGNAEVMQHGADCVAVTFRPDDQQLCVSTLDGTLHLWDVRTSQETGTIEGRRDLAGGRKAEDRTTAKNSAAGKCFESICYSADGRCLLAGGASKYVCIYELTQRVLLKRFRISENRSIDGILDKLNSRNMAEGGPLDAVDHESGDERDRMGKGPRDISLPGVKAGDMSTRRTRPEVRTKAVRFSPTGRAWAAASTEGLLIYSLDASIVFDPFELDVDITPDAILAASARGDHLAAIAMSVRLGEPVPLVRAIECVPHADIALVAQQLPPPYVDRLLSAIAAQVDGSRHVHFYLEWCAALLVAHGRSIRGTAQERMTVLRDLQKSLTRQYEDIAKVCDDNVYTLQYLLAVGAAAAGVVVNDTEAMDMSG* # ORIGINAL: g8414.t1 original gene structure, not modified by PASA NODE_471_length_23138_cov_43.6178 AUGUSTUS gene 13492 17595 . + . ID=g8414;Name=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS mRNA 13492 17595 . + . ID=g8414.t1;Parent=g8414;Name=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 13492 13653 . + . ID=g8414.t1.exon1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 13492 13653 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 13772 13911 . + . ID=g8414.t1.exon2;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 13772 13911 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 14055 14205 . + . ID=g8414.t1.exon3;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 14055 14205 . + 1 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 14340 14424 . + . ID=g8414.t1.exon4;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 14340 14424 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 14558 14646 . + . ID=g8414.t1.exon5;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 14558 14646 . + 2 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 14975 15082 . + . ID=g8414.t1.exon6;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 14975 15082 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 15264 15351 . + . ID=g8414.t1.exon7;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 15264 15351 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 15536 15667 . + . ID=g8414.t1.exon8;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 15536 15667 . + 2 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 15825 15945 . + . ID=g8414.t1.exon9;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 15825 15945 . + 2 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 16132 16261 . + . ID=g8414.t1.exon10;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 16132 16261 . + 1 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 16476 16553 . + . ID=g8414.t1.exon11;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 16476 16553 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS exon 16789 17595 . + . ID=g8414.t1.exon12;Parent=g8414.t1 NODE_471_length_23138_cov_43.6178 AUGUSTUS CDS 16789 17595 . + 0 ID=cds.g8414.t1;Parent=g8414.t1 #PROT g8414.t1 g8414 MLPTFAETAARALPPRRSLGATAQRKDVKVPRHMQSGALQGPNDLMRLLREWDRGSRGTRDKILTEFISSNKNKTGPQLEAELANGASLFLTRLTAWLRLTYLLGSSISLQLQAISVFISASSGHRFLAEFMEVGGVLTILEILGLDQVSEADKAESLYLLLSIAHAGRKYKELVCESYGIRVVAECLQKCRSEKTRDCARQLLQQLGTGNPRYHQQVYKALVSLLPSASPGAQQMAAQALRLILPNVASPAQPAIVEAVLSLLKSLYLQVQYEGCELLKELIKYEALQHSIVAGLVSLLKPGADELSAVASKQSDVTERSIAEHGFGSEDTKKKFAGQDAPGPLSAYAQQAAAAKMLGVLAGTSTMLAVRMVKLQVVHGLLVAMSNTQHSDSQKRAGGTLMYLIRSFPSVADKVRDAVGSLFFDDFMARPETIYSSLTGPQLEVLASNQVFIELPSDADFEVGPLVPIEAHHAHDVYESGSESGSDAESADDMQMAVNKQSSHTNHDDRVRSAHSHSSEAEDLPFTRKVSLYSVLAGGGSQGQGSTSAIHASQAALKQSSGLAQGSFGSVTSMQTVGTLPSSSFNTNAAGGAGASGTAPALSKKRSSLDDIHTPFVHADPLSGISAAANARATDADEILSSQKWREFQAESKARLGNATDADGTALPPLDMAESERFKRSRDPGVFRKPLPGGFA* # ORIGINAL: g9347.t1 original gene structure, not modified by PASA NODE_553_length_21353_cov_39.4718 AUGUSTUS gene 12356 15497 . + . ID=g9347;Name=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS mRNA 12356 15497 . + . ID=g9347.t1;Parent=g9347;Name=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 12356 12585 . + . ID=g9347.t1.exon1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 12356 12585 . + 0 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 12750 12865 . + . ID=g9347.t1.exon2;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 12750 12865 . + 1 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 12973 13493 . + . ID=g9347.t1.exon3;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 12973 13493 . + 2 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 13705 13895 . + . ID=g9347.t1.exon4;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 13705 13895 . + 0 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 14128 14215 . + . ID=g9347.t1.exon5;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 14128 14215 . + 1 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 14535 14734 . + . ID=g9347.t1.exon6;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 14535 14734 . + 0 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 15013 15103 . + . ID=g9347.t1.exon7;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 15013 15103 . + 1 ID=cds.g9347.t1;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 15375 15497 . + . ID=g9347.t1.exon8;Parent=g9347.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 15375 15497 . + 0 ID=cds.g9347.t1;Parent=g9347.t1 #PROT g9347.t1 g9347 MVAIDIRPSLEEVRALALNGNVIPVFCEEFDDLVTPVSAYLKVADGSTHSFLLESVTQGERLGRYSFIGVNPYEIIKTGEGYPISGDPLKPIEERMKNVKYVQVPGLPPFTGGAIGFVTYDCIRHFEPRTNCPLKDGLPFLPEALFMFCNSLVIFDHIRHSVRIVSHVRLDGFHADISGHVDPVSVAYERACADARVLLGRLQRLDTPVPRQGPVTPSAVGIDPNHTRAEYEGMVLDLKKHINCGDIIQAVPSRRLVRETDVHPFNMYRHLRSLNPSPYMFFVDCEDFQIVGASPETLVKVTSDGLVINHPIAGTRKRGATPEEDEALAKELLADEKERAEHIMLVDLGRNDVNRVCDPRTVKVDSLMHIERYSHVMHIVSQVSGKLRSNLTPFDAFRSIFPAGTVSGAPKIRAIELVYALEKKRRGIYAGGVGYFSFGGEIDTCIAIRTMMMHDGKAYLQAGGGIVFDSNPKDEYEETVNKLGGNVAAIRKAELYYAVLQSAQKESADDPSAKRQRTN* # ORIGINAL: g9346.t1 original gene structure, not modified by PASA NODE_553_length_21353_cov_39.4718 AUGUSTUS gene 11239 12292 . + . ID=g9346;Name=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS mRNA 11239 12292 . + . ID=g9346.t1;Parent=g9346;Name=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 11239 11277 . + . ID=g9346.t1.exon1;Parent=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 11239 11277 . + 0 ID=cds.g9346.t1;Parent=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 11409 11471 . + . ID=g9346.t1.exon2;Parent=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 11409 11471 . + 0 ID=cds.g9346.t1;Parent=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 11609 12292 . + . ID=g9346.t1.exon3;Parent=g9346.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 11609 12292 . + 0 ID=cds.g9346.t1;Parent=g9346.t1 #PROT g9346.t1 g9346 MDFSESEYPPLPHSAVVEVPTVDDCDVSKIVLVQLVQPRIHGSQLNYAAALESTYAPPLRTLPAPRPTCSARPSTCFVRIHSRVGTPSIAAKSSQSASQKKAVVRNVRTAPATRIANRAPVSVYRAPVSRAMYDPTPMSRSIKPSPAGQSTKSKASCRQSPSFSPRLAMRDRIRRIRGVRAATCAKGGRSFAAGAVASSCRLSVHRRQSLRPLWKTLSLSFASSASTAPSSFASVTCRPVHALADITHASLGDSNRTPIRC* # ORIGINAL: g9350.t1 original gene structure, not modified by PASA NODE_553_length_21353_cov_39.4718 AUGUSTUS gene 19919 21110 . + . ID=g9350;Name=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS mRNA 19919 21110 . + . ID=g9350.t1;Parent=g9350;Name=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 19919 20172 . + . ID=g9350.t1.exon1;Parent=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 19919 20172 . + 0 ID=cds.g9350.t1;Parent=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 20454 20579 . + . ID=g9350.t1.exon2;Parent=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 20454 20579 . + 1 ID=cds.g9350.t1;Parent=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 20996 21110 . + . ID=g9350.t1.exon3;Parent=g9350.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 20996 21110 . + 1 ID=cds.g9350.t1;Parent=g9350.t1 #PROT g9350.t1 g9350 MAEKQLTILERIVAQRRLDVAAAKAVLSEHSLKEAVLSGQFDAEYPIVNFHATLSRGGPMALIGEIKRASPSLGDICPGIDAPARALEYAHGGAVGISVLTEPTWFKGTLADMASIRKAVSVLGDKRPAILRKDFVIDDYQVYEARAYGADTLLLIVKVGTIPF* # ORIGINAL: g9349.t1 original gene structure, not modified by PASA NODE_553_length_21353_cov_39.4718 AUGUSTUS gene 17172 19482 . + . ID=g9349;Name=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS mRNA 17172 19482 . + . ID=g9349.t1;Parent=g9349;Name=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 17172 17325 . + . ID=g9349.t1.exon1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 17172 17325 . + 0 ID=cds.g9349.t1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 17548 17616 . + . ID=g9349.t1.exon2;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 17548 17616 . + 2 ID=cds.g9349.t1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 17945 18065 . + . ID=g9349.t1.exon3;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 17945 18065 . + 2 ID=cds.g9349.t1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 18275 18436 . + . ID=g9349.t1.exon4;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 18275 18436 . + 1 ID=cds.g9349.t1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 18592 18772 . + . ID=g9349.t1.exon5;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 18592 18772 . + 1 ID=cds.g9349.t1;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 19135 19482 . + . ID=g9349.t1.exon6;Parent=g9349.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 19135 19482 . + 0 ID=cds.g9349.t1;Parent=g9349.t1 #PROT g9349.t1 g9349 MAAIKSCLKQLSTVPPVSPPHEEIKRAFGEILSGDATDAQIGAFLLALKLSGETAEHLAACAEAMNEVSVPCPIEFDVYDIVGTGGDGHGTFNVSTAAAVVAAGAGVRVGKHGNRSASSPSGSADVLEALGAKIAIGPDVVRQSLATSGFCFLFAQTFHPLLKRVGVIRRELGVRTVFNLVGPLCNPARPRGSVVGVANRDIGGMMARALVTTGLKQGMVVCGSEGLDEISPTGITHVWRIHENGDVVESTISPSYFGLPSHPLEAMIGGSPSDNALLMRDILAGKKEGPMTDFVLLNAAALITVAGLVTDTDYVGAVALARQSIASGSAVRAMEAYVAASNAQ* # PASA_UPDATE: g9345.t1, single gene model update, valid-1, status:[pasa:asmbl_8142,status:12],[pasa:asmbl_8143,status:12], valid-1 NODE_553_length_21353_cov_39.4718 . gene 59 9880 . - . ID=g9345;Name=g9345.t1 NODE_553_length_21353_cov_39.4718 . mRNA 59 9880 . - . ID=g9345.t1;Parent=g9345;Name=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 9358 9880 . - . ID=g9345.t1.exon1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 9358 9880 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 8897 9097 . - . ID=g9345.t1.exon2;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 8897 9097 . - 2 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 8543 8643 . - . ID=g9345.t1.exon3;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 8543 8643 . - 2 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 8125 8263 . - . ID=g9345.t1.exon4;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 8125 8263 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 7522 7679 . - . ID=g9345.t1.exon5;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 7522 7679 . - 2 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 7117 7188 . - . ID=g9345.t1.exon6;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 7117 7188 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 6718 6900 . - . ID=g9345.t1.exon7;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 6718 6900 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 6495 6574 . - . ID=g9345.t1.exon8;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 6495 6574 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 6103 6217 . - . ID=g9345.t1.exon9;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 6103 6217 . - 1 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 5778 5900 . - . ID=g9345.t1.exon10;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 5778 5900 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 5145 5477 . - . ID=g9345.t1.exon11;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 5145 5477 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 4524 4784 . - . ID=g9345.t1.exon12;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 4524 4784 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 4194 4338 . - . ID=g9345.t1.exon13;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 4194 4338 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 3049 4055 . - . ID=g9345.t1.exon14;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 3049 4055 . - 2 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 1584 2890 . - . ID=g9345.t1.exon15;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 1584 2890 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 1195 1380 . - . ID=g9345.t1.exon16;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 1195 1380 . - 1 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 790 913 . - . ID=g9345.t1.exon17;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 790 913 . - 1 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 486 647 . - . ID=g9345.t1.exon18;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 486 647 . - 0 ID=cds.g9345.t1;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . exon 59 220 . - . ID=g9345.t1.exon19;Parent=g9345.t1 NODE_553_length_21353_cov_39.4718 . CDS 59 220 . - 0 ID=cds.g9345.t1;Parent=g9345.t1;3_prime_partial=true #PROT g9345.t1 g9345 MWSGSLPKAFTLSGAASQTDESKRDSRLQRKLKPFDKETDDLKRLRGVLEYCEAANESEQRLFFQERYYQARSSLRVACPCCMYASVDLDFIFYCLVCTGTCVLIDLCILSQQVYAVVFDAFAYLEASVRLKASKDKQVSDAQKEELGVVIGVLDRILYNLPDLIHKKWQIRSLGTIIEKLLMFGNSCKIRKEGFRLLLLWMEGLGDQVNEHCLNLFRNVIGLAPFVSGDPGVKLRQAPIGMPEHALIPAGVETGSAADQSRELLAFFFDYITLKERPLVDTPSSNALTGFKFMLAKFKKHYMTMLYPAVCKRFGIMEESDDHGFRMCPKDLHAIVVEAYCGWVTGASARHKQIRSVLFANVENIEIMHEIFRQTFLMPFSHEDVMKNVIEVYREWVRAEIKPTFMQVPIQGKTPDVDSEIADAYDVIMTGLHSNLRLFVKHTAQVFTCKSQPDLMDQQINVCIEVLSLYQLMTLETSSEMNIETWEHLLDTLMSITQLLLGGEGTAGNFRDPLANSLAPLVLETLFVGWVRGNIVEYGTEQMWTRLLLMLQSLTHWNEVIRQWKTTMMQLTRLLAQHVYSLDLDNLPLDQIKQRADQKRRRQMQHEGGGVGDSNASVDDTGNPHSYVPQSSPKTGRDGNDVPSSLGGGVARKGNAMARTPSFARLSNGTVHQTYKSFVFIQSLEWTASLAMFMWRNMLGILGNVNHIRDSENYADAMTCLVWVWDTLSSVRANQGVSMDNFTTPVVPSELPPLFVYATWIFQACSRPDDYQKGRAMAYGLLCRMIARRHDHPLPADYLPHFYRVLHMGLTSNDMSVLDAIITNSTGLFSYVFPGATVLIVDFMAAIDRLLFVQDATVPKQLRKDAITILGSLISLPSLYEGVDLPVLPPVSFDGGVQTAQTSSLHHGMGGSGANGGEISIQVPQMLQLTHQHPQQQQQQQQYAQQQQHAVDPSHPQPDIVAVGRSATDVKAQLMHILRRIVCTEPYTSTRCMGVCSLFALTFQELGTGTWSKDVEVCIDVLLALLPMEDGVVAHLGIEMVCQLSHRHAEIDALGGPRIVERIIDSVVATIANLLSNPAGRRKDATVTALFFCLMDWLMVVPVDALNGSPLAHSVFSVIDYAMGISTSPLPVAVPSGTSSLGAVTGQLLSQQYKQSLEKSPSSKIFGLRERPTSAGEITNSNVSVSSSASGGSASLGTASGIAVAQHFAVGLELSSPAVLAGGSLRTHSGAIPTLPASTTSSTTSAVTTANAVPQTAMSKFVDTFVKIDAVKFVDALGNGLESAELTLKGAFHPKLSKKRSDSGAHVTTPETVSDTQSMVGFMGTESVSASLAARTVLHHLLNHFANFPSVAGVARLTCRVSENNDDGMAENHELTPAIFENKGVQFFVYNDTTLISLVEMPAVDGHTAESRVIVRDVTGKHVWDATLLYNPSDAGNTRMSALLSATTGGAASRAIVHRSDSVAEGSQDYRGVVERLDMTGAMDDDPSVRRVRLWPDTRYHRHAKKCPHFQNAKTAGIDMLDEALKYIGETSPECLFFANTPLDVPYPTPDWMARTEALFEDAIAAQEADEREFLRACESQPGPNMVSEPVRPASVAPPISQFHHCRLLLSHLGFLSWENRRHFHILKKNDNLLRRLKQLDKSGSRDYHKIGVVYVARGQEDEFSILANGRGSKLYEEFLAGLGWEVDLSTHMGFMGGLDRKLSTGRTTPYYATSTMEVVYHVTTRMPSDLEDPQWMIKKKRHVGNDRVQIVWSEHTREYRPEIIKTRFNDAIIVIYPLRNGLYQVLINKKPEV # ORIGINAL: g9348.t1 original gene structure, not modified by PASA NODE_553_length_21353_cov_39.4718 AUGUSTUS gene 15587 17114 . + . ID=g9348;Name=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS mRNA 15587 17114 . + . ID=g9348.t1;Parent=g9348;Name=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 15587 15821 . + . ID=g9348.t1.exon1;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 15587 15821 . + 0 ID=cds.g9348.t1;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 16219 16337 . + . ID=g9348.t1.exon2;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 16219 16337 . + 2 ID=cds.g9348.t1;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 16557 16706 . + . ID=g9348.t1.exon3;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 16557 16706 . + 0 ID=cds.g9348.t1;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS exon 16947 17114 . + . ID=g9348.t1.exon4;Parent=g9348.t1 NODE_553_length_21353_cov_39.4718 AUGUSTUS CDS 16947 17114 . + 0 ID=cds.g9348.t1;Parent=g9348.t1 #PROT g9348.t1 g9348 MSTTGGELIKELPLPDTIDWGDHVPKCVMIDNYDSFTWNIYQYLCQLGADVSVIRNDAITIDELAAMNPTHVVISPGPGHPSTDSGISPDVIRRFAGVIPVLGVCLGEQCMYEVYGGKVIHAGEIMHGKTSVVTNDGRGLYKGLPSAFEVIRYHSLAGDKAYVPPDLEVTSTTASGVIMGVRHRTLCVEGVQYHPESIKSDYGKSMLLNFLKWNGGTWEGNNL* # ORIGINAL: g11667.t1 original gene structure, not modified by PASA NODE_434_length_23829_cov_42.0965 AUGUSTUS gene 19964 23216 . + . ID=g11667;Name=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS mRNA 19964 23216 . + . ID=g11667.t1;Parent=g11667;Name=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 19964 20048 . + . ID=g11667.t1.exon1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 19964 20048 . + 0 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 20154 20290 . + . ID=g11667.t1.exon2;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 20154 20290 . + 2 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 20439 20607 . + . ID=g11667.t1.exon3;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 20439 20607 . + 0 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 20821 20906 . + . ID=g11667.t1.exon4;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 20821 20906 . + 2 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 21125 21260 . + . ID=g11667.t1.exon5;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 21125 21260 . + 0 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 21426 21516 . + . ID=g11667.t1.exon6;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 21426 21516 . + 2 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 21690 21858 . + . ID=g11667.t1.exon7;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 21690 21858 . + 1 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 22083 22179 . + . ID=g11667.t1.exon8;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 22083 22179 . + 0 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 22470 22597 . + . ID=g11667.t1.exon9;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 22470 22597 . + 2 ID=cds.g11667.t1;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 22911 23216 . + . ID=g11667.t1.exon10;Parent=g11667.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 22911 23216 . + 0 ID=cds.g11667.t1;Parent=g11667.t1 #PROT g11667.t1 g11667 MSLRRTGHTCPNAKVEAGAKTYVKLVELASDFFKARASIEEQHSRALQNLFDNFNKKTQQELKGLRETCPSLFQCWSAVLQEADIAGRSWQALSTDLGAMFTTSACDYAAWANTGRKRIFKERERMEDELKKSENVCDGHRREYVDAWAKAKDKLISSKPGEKERSLAVCQNAHNEYVMNLGGTRAHQIVHFGAQLPDLLTELEEFEIQMTSFASDTLSSYASRIQTTYEDLQTGLNGIVERAQSINGVADVASFVGSLGIDDNKPFPLCVFVPVGDGLEGDWSERLIINENTLGPLRSRRTDLEQQLATVQGKIAGSSKTYESVEGMRRTYEENPALGDPESLMIKINELRIELRDLMREEERMKAQIDLACSIEQGEGAEAAAATESASEGRRAHEWIAVKKNSMIGRLASNCGYCGTLLLKDFRDIVKCAGCSMLIHDKCRVYAASECTGVKGTRRVSVQSLTR* # PASA_UPDATE: g11666.t1, single gene model update, valid-1, status:[pasa:asmbl_7247,status:12], valid-1 NODE_434_length_23829_cov_42.0965 . gene 18259 19428 . - . ID=g11666;Name=g11666.t1 NODE_434_length_23829_cov_42.0965 . mRNA 18259 19428 . - . ID=g11666.t1;Parent=g11666;Name=g11666.t1 NODE_434_length_23829_cov_42.0965 . five_prime_UTR 19405 19428 . - . ID=g11666.t1.utr5p1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . exon 19284 19428 . - . ID=g11666.t1.exon1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . CDS 19284 19404 . - 0 ID=cds.g11666.t1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . exon 18928 19028 . - . ID=g11666.t1.exon2;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . CDS 18928 19028 . - 2 ID=cds.g11666.t1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . exon 18651 18779 . - . ID=g11666.t1.exon3;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . CDS 18651 18779 . - 0 ID=cds.g11666.t1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . exon 18259 18471 . - . ID=g11666.t1.exon4;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . CDS 18367 18471 . - 0 ID=cds.g11666.t1;Parent=g11666.t1 NODE_434_length_23829_cov_42.0965 . three_prime_UTR 18259 18366 . - . ID=g11666.t1.utr3p1;Parent=g11666.t1 #PROT g11666.t1 g11666 MLSFVARRASLILPASAPFRTMATIKHVHSDNAPKAIGPYSQAIVSNGIVWVSGQLPMHHDTMQLSTGTIQEQTKVALGNMRSILEAAGTNLAHVVKVNVYLKNMGDFASMNEAYAEVFGDARPARAAVEVARLPRDAQIEIECTAVIPSA* # ORIGINAL: g11662.t1 original gene structure, not modified by PASA NODE_434_length_23829_cov_42.0965 AUGUSTUS gene 4756 7400 . - . ID=g11662;Name=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS mRNA 4756 7400 . - . ID=g11662.t1;Parent=g11662;Name=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 7359 7400 . - . ID=g11662.t1.exon1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 7359 7400 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 7107 7179 . - . ID=g11662.t1.exon2;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 7107 7179 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 6863 6969 . - . ID=g11662.t1.exon3;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 6863 6969 . - 2 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 6657 6737 . - . ID=g11662.t1.exon4;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 6657 6737 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 6370 6483 . - . ID=g11662.t1.exon5;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 6370 6483 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 5975 6072 . - . ID=g11662.t1.exon6;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 5975 6072 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 5464 5692 . - . ID=g11662.t1.exon7;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 5464 5692 . - 1 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 5136 5304 . - . ID=g11662.t1.exon8;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 5136 5304 . - 0 ID=cds.g11662.t1;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 4756 4913 . - . ID=g11662.t1.exon9;Parent=g11662.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 4756 4913 . - 2 ID=cds.g11662.t1;Parent=g11662.t1 #PROT g11662.t1 g11662 MATDVQQKIIKQIEFYFGDSNFPNDKFLRGAAEKNADKWVDIDKLLTFNRLKALTTEAEKIAEAVRLSTSDLVEVSEDGKSIRRTKAIPEERDQEKRTVYVKGFPKEATLEELQEYFGARGTVLAVRMRRFREATKEFKGSVFAEFDTEETAKKVAAEELTYKDSPLLVMAKNDYVEKKRRERQEKFKERANAATSKKRKAEDSIDELAAEAAKEESGDKEDEGDKFVAGCVIHFAAAPEESAREDVKESFGAHGEIAWVDFARGQTEGHVRFSDPESAKKAVDAHAVTPIKLKDGEITVKLLEGEEEQKYWTKLREDRASRKKPRHGGRGGRGGRGGRGGRGGRGGRGGRGRGGK* # PASA_UPDATE: g11661.t1, single gene model update, valid-1, status:[pasa:asmbl_7243,status:12],[pasa:asmbl_7244,status:12], valid-1 NODE_434_length_23829_cov_42.0965 . gene 1402 4213 . + . ID=g11661;Name=g11661.t1 NODE_434_length_23829_cov_42.0965 . mRNA 1402 4213 . + . ID=g11661.t1;Parent=g11661;Name=g11661.t1 NODE_434_length_23829_cov_42.0965 . five_prime_UTR 1402 1468 . + . ID=g11661.t1.utr5p1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 1402 1577 . + . ID=g11661.t1.exon1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 1469 1577 . + 0 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 1826 1874 . + . ID=g11661.t1.exon2;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 1826 1874 . + 2 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 2055 2138 . + . ID=g11661.t1.exon3;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 2055 2138 . + 1 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 2264 2341 . + . ID=g11661.t1.exon4;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 2264 2341 . + 1 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 2805 2941 . + . ID=g11661.t1.exon5;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 2805 2941 . + 1 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 3246 3355 . + . ID=g11661.t1.exon6;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 3246 3355 . + 2 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . exon 3976 4213 . + . ID=g11661.t1.exon7;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . CDS 3976 4086 . + 0 ID=cds.g11661.t1;Parent=g11661.t1 NODE_434_length_23829_cov_42.0965 . three_prime_UTR 4087 4213 . + . ID=g11661.t1.utr3p1;Parent=g11661.t1 #PROT g11661.t1 g11661 MYGGEGQPTAAIARGGGYGYTYYFLVALSLLVLTCVGLFMCLTGYGSRFDVRWFLSNISPHMFSGLGISLAIALSVVGAAWGIFITGSSIIGGGVKAPRIKTKNLISIIFCEAVAIYGIIMAIVFSNNFKNTSTDFGVVPSYSRYDVNTLFTGYALFGGGLTVGFSNLFCGICVGIVGSGAALADAQNGALFVKILIVEIFGSAIGLFGVIIAIIQVGNVTTGKA* # PASA_UPDATE: g11664.t1, single gene model update, valid-1, status:[pasa:asmbl_7246,status:3], valid-1 NODE_434_length_23829_cov_42.0965 . gene 11808 16463 . - . ID=g11664;Name=g11664.t1 NODE_434_length_23829_cov_42.0965 . mRNA 11808 16463 . - . ID=g11664.t1;Parent=g11664;Name=g11664.t1 NODE_434_length_23829_cov_42.0965 . five_prime_UTR 16266 16463 . - . ID=g11664.t1.utr5p1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 16097 16463 . - . ID=g11664.t1.exon1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 16097 16265 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 15874 15965 . - . ID=g11664.t1.exon2;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 15874 15965 . - 2 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 15481 15723 . - . ID=g11664.t1.exon3;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 15481 15723 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 15119 15217 . - . ID=g11664.t1.exon4;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 15119 15217 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 14755 14833 . - . ID=g11664.t1.exon5;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 14755 14833 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 14412 14483 . - . ID=g11664.t1.exon6;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 14412 14483 . - 2 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 14109 14287 . - . ID=g11664.t1.exon7;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 14109 14287 . - 2 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 13797 13972 . - . ID=g11664.t1.exon8;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 13797 13972 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 13417 13598 . - . ID=g11664.t1.exon9;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 13417 13598 . - 1 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 13023 13216 . - . ID=g11664.t1.exon10;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 13023 13216 . - 2 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 12775 12903 . - . ID=g11664.t1.exon11;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 12775 12903 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 12515 12651 . - . ID=g11664.t1.exon12;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 12515 12651 . - 0 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 12280 12351 . - . ID=g11664.t1.exon13;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 12280 12351 . - 1 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . exon 11808 12133 . - . ID=g11664.t1.exon14;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . CDS 12061 12133 . - 1 ID=cds.g11664.t1;Parent=g11664.t1 NODE_434_length_23829_cov_42.0965 . three_prime_UTR 11808 12060 . - . ID=g11664.t1.utr3p1;Parent=g11664.t1 #PROT g11664.t1 g11664 MPSRHDDSRSHRAGMTPDAATSHHEDCDAEDGQDRAEFPLLPTAGVPGGNADQGDDEYAQGLDLETVKREYYGPKRSAEQWRISLLLMVLEFLQVYSVILILGERFPWPAEWVSNVRILHLFNGDYYEFVRVGCCWAGTTLAIPSADIALNYTGYAVVWTMIPVLGAAILLGVHAYLRRRAAVSMLLNMAFAQRVIFAFGEIVYLPVGIALSRLFQCSGGFLVVDDSAVCWSGKHAAVAGPLLAIGITMLIALPVFVWYRVRLQLIHTSPAHHERHLRQKELEYAQRADTVWSLFGMHLFSPYRRQWAYFKVVSLCFRLSVATIMSFLYQHPKYNTGLLLLLLTAYAVALTAQPPYRLRSFGILHALLSWLNVLSCLLGYLVILRTRSPLLVSAPLRYELMLLFIAGLVLLSIVGVYAVMKSRGVCFKRPLWPSGTRPEFDALRPTQRRSVALVIEGRQLLEAVYRTPAALVPTHDLADLIERVNTTFETALKEYDPYAETLRDLLDELVNAHNTAAPFSMYADSKKKSVSKTAKELQEIMPDFRRRLDRRDYDLVLADPRLKRVLLKLYCARVFLGMRDTSMRRQRYEENMARLAGGGASRVNSSARVDMYMDDADTNGLDAFLKEIDRF* # PASA_UPDATE: g11663.t1, single gene model update, valid-1, status:[pasa:asmbl_7242,status:12],[pasa:asmbl_7245,status:12], valid-1 NODE_434_length_23829_cov_42.0965 . gene 7678 11029 . + . ID=g11663;Name=g11663.t1 NODE_434_length_23829_cov_42.0965 . mRNA 7678 11029 . + . ID=g11663.t1;Parent=g11663;Name=g11663.t1 NODE_434_length_23829_cov_42.0965 . five_prime_UTR 7678 7895 . + . ID=g11663.t1.utr5p1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 7678 8966 . + . ID=g11663.t1.exon1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 7896 8966 . + 0 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 9260 9343 . + . ID=g11663.t1.exon2;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 9260 9343 . + 0 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 9547 9723 . + . ID=g11663.t1.exon3;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 9547 9723 . + 0 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 10025 10278 . + . ID=g11663.t1.exon4;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 10025 10278 . + 0 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 10413 10500 . + . ID=g11663.t1.exon5;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 10413 10500 . + 1 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . exon 10677 11029 . + . ID=g11663.t1.exon6;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . CDS 10677 10859 . + 0 ID=cds.g11663.t1;Parent=g11663.t1 NODE_434_length_23829_cov_42.0965 . three_prime_UTR 10860 11029 . + . ID=g11663.t1.utr3p1;Parent=g11663.t1 #PROT g11663.t1 g11663 MHHNLTLLRRTAQGQGQARQPGTQGVHSRLRRSRANSTTTLPGTDTEDSLNVDMGVPALSVNISAYDGEEAAHFPGDSEDAVSAGIAETYSYSAGDAKSTDSNDNDNDNDDDDGNEGDSEGADERSRLLGKSPQRGIHNQHALYGAASASPLGTAHHDLHSLGSAFGRPHVTHGPQGGLLSHGGGSRGNSRGPSPSPGILSHLAGGLRRIRRDSTASTGSTGSRSSSMSSRSRRLSGLAALPKPLHTDSRFVDIFTGLRERQKTQAHARASVSSQMLAHAQVKFHDYSQERIEVTDVDDVGKFSLDRPDWAVVRWIDIDGLDVAVMEVIGMYFRLHPLALDDCFQVPQQPKVDFYPKDDVVEHNHLFMITNMMFRDAEGVLCTEQVSIFMLDNILITVQEGLPGDVWSKVRLKLSNPLSKIRCYDVSYLLYALLDGIVAACYPEVESLGAQIDDIELELLSSKRLKFNVTTLVYQLKRDLLLVRRTMGPMRDVVVQMTSNDDHCISKTAITHLTDVKDSASHLVELMETYWECSTQLSFLYSDRQAHKMNAVLYRLTLISSVFLPLTFVAGVYGMNFDHMPELHWTYGYLFAWMIFVGLTIVAIATFLRMGLMELLPQ* # ORIGINAL: g11665.t1 original gene structure, not modified by PASA NODE_434_length_23829_cov_42.0965 AUGUSTUS gene 17082 18282 . + . ID=g11665;Name=g11665.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS mRNA 17082 18282 . + . ID=g11665.t1;Parent=g11665;Name=g11665.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 17082 17158 . + . ID=g11665.t1.exon1;Parent=g11665.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 17082 17158 . + 0 ID=cds.g11665.t1;Parent=g11665.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS exon 17253 18282 . + . ID=g11665.t1.exon2;Parent=g11665.t1 NODE_434_length_23829_cov_42.0965 AUGUSTUS CDS 17253 18282 . + 1 ID=cds.g11665.t1;Parent=g11665.t1 #PROT g11665.t1 g11665 MSRDSSKARRCAKLLVFADTQLQGYRGETHALGSITRWDAARHISAFVNAVAAFAPPDVAILAGDTLDEGAIASASEFAEYTVTLGRALLPLDAHCTAAGASLIPGEDASRTVLRSGCIPLIVLGGDNDVGGEGRDAMTDSLWDRFASRFGPPNAWVPVERFHEAREVHASTTAPVAVTKLETVSQLCASSDCFRRRSATAAFVSAASADVSTSPSDHDAGHVPAVVAVSHVPFRAASPVLVDAIVSSLRPVVAFAGHDHVARCDVVSGPNRGTPTGGSRVGLDSGGLSFAQFVLAPASYRMGTRHVGYGVATVCDDGAYAFRHCTLPSRFPHLAGYAVLIAAVTWYVCWRRQAMGRGKKSRQEVLYL* # ORIGINAL: g13419.t1 original gene structure, not modified by PASA NODE_3014_length_4534_cov_41.7493 AUGUSTUS gene 1 838 . - . ID=g13419;Name=g13419.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS mRNA 1 838 . - . ID=g13419.t1;Parent=g13419;Name=g13419.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS exon 651 838 . - . ID=g13419.t1.exon1;Parent=g13419.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS CDS 651 838 . - 0 ID=cds.g13419.t1;Parent=g13419.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS exon 1 470 . - . ID=g13419.t1.exon2;Parent=g13419.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS CDS 1 470 . - 1 ID=cds.g13419.t1;Parent=g13419.t1 #PROT g13419.t1 g13419 MAAYVIGLDFGTSRSGHAFAVRRDDAGGKAGYDAAIRIKHNWPFSCEPCAKAPTHLLYSVSDNGAVRLENWGYAAAHQYLTEGKQRRDLVLIKNFKMRLFKTTHGANNGLSHKPGTPIAPSHADCQRVGNSPTCDSTHMPEQQQQMAVSNDRGDAVVAAKTVSGRIVYIEVLDLIADMLRVLKEDVLQIVRSADAGVRESEIKWVITVPAIWDARAKDF # ORIGINAL: g13420.t1 original gene structure, not modified by PASA NODE_3014_length_4534_cov_41.7493 AUGUSTUS gene 2043 4534 . + . ID=g13420;Name=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS mRNA 2043 4534 . + . ID=g13420.t1;Parent=g13420;Name=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS exon 2043 2185 . + . ID=g13420.t1.exon1;Parent=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS CDS 2043 2185 . + 0 ID=cds.g13420.t1;Parent=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS exon 2409 3794 . + . ID=g13420.t1.exon2;Parent=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS CDS 2409 3794 . + 1 ID=cds.g13420.t1;Parent=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS exon 4023 4534 . + . ID=g13420.t1.exon3;Parent=g13420.t1 NODE_3014_length_4534_cov_41.7493 AUGUSTUS CDS 4023 4534 . + 1 ID=cds.g13420.t1;Parent=g13420.t1 #PROT g13420.t1 g13420 MSDGEKVTEANLRFGARVKRGPSWTWGDQDGGAGRLGTLVRSASSLKEWCCVKWDSGKENRYRIGYDGAFDIVYASGNGHLGEWRSPANKQRWCSLPSQVDGPLCAHGNAIMMKAHWSCCGVRSESGQCTASAPDTADTADHKGESRSSERGQWCSLPTQTDGAHCSHAGDIIRRPHWSCCGHDVGEKCSAKQVPEPKGPAHSGEGKRRIAVGDTVKLSTGYTTHAEATGEHLTPVTRGLVTAYAASDDTYHVRTIDGRGRWYKEDALVLVEGEEKLNAEAVLALTKLLEFAHLLESMKAVTSSTSSTNDRAYVTNNNVQPGQRVVRGPDWMWGKQDGGEGKEGTILDTCVDKSVRVKWDAGGENRYRLGMAGCHDLYFAHARHTAHAHALTAVTKVSPWICNICRNSSPPGLRWRCETCDFDACQVCMQAVNKFTPPTTSATSSQTAATPAKMPRTSFVVGVDFGTARSGHAFAVRTDNPTINVKYNWAGSMEPYAKAPTQLLYSVSDAGVPHLEAWGHVAVERYIREGKQREDIVLIKNFKMRLFEGAGGMRDASDAFVSPTAHSDAEGKRIVKDTGVATMPTLQHLLQSETEGYTSQPKSTSQVTSRGSQGKDTITVKTTGGRHVKFTVFNLVADMLRVLKEDVLQIVRSADAGVRESEIKWVITVPAIWDARAKDF # PASA_UPDATE: g11011.t1, single gene model update, valid-1, status:[pasa:asmbl_2032,status:3], valid-1 NODE_1581_length_10366_cov_39.6934 . gene 1932 7154 . + . ID=g11011;Name=g11011.t1 NODE_1581_length_10366_cov_39.6934 . mRNA 1932 7154 . + . ID=g11011.t1;Parent=g11011;Name=g11011.t1 NODE_1581_length_10366_cov_39.6934 . five_prime_UTR 1932 2218 . + . ID=g11011.t1.utr5p1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 1932 3199 . + . ID=g11011.t1.exon1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 2219 3199 . + 0 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 3509 3631 . + . ID=g11011.t1.exon2;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 3509 3631 . + 0 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 3791 3948 . + . ID=g11011.t1.exon3;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 3791 3948 . + 0 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 4287 4337 . + . ID=g11011.t1.exon4;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 4287 4337 . + 1 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 4602 4755 . + . ID=g11011.t1.exon5;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 4602 4755 . + 1 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 5121 5229 . + . ID=g11011.t1.exon6;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 5121 5229 . + 0 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 5452 5575 . + . ID=g11011.t1.exon7;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 5452 5575 . + 2 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . exon 5798 7154 . + . ID=g11011.t1.exon8;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . CDS 5798 7052 . + 1 ID=cds.g11011.t1;Parent=g11011.t1 NODE_1581_length_10366_cov_39.6934 . three_prime_UTR 7053 7154 . + . ID=g11011.t1.utr3p1;Parent=g11011.t1 #PROT g11011.t1 g11011 MAFGIPAFLVEFGSQVRQLSSSARILVYAATALVASLCLLVCHVIASEWIAIYYTIHGGGVSQHVPGIFAQHAIASAAADSDSPTPTLLSSVVAAGASAVFEQQQQQQQQYQQQHQHIQYLQQQQPRIIFPVHASATAARDLLLRLCTSLAAIAIAKFAEYLVRRWWASEDTAAASRRRGRGSRTAPSSSNPSATLRNRGTTPPTTKPSTHANTANTANTVNAAPLPSATGAAGVALQARNSHASDDANAPVTHDGDTNDVNADTDGDVDAGSPRAHVTALSVAVPFLVLLAAIGRLCQLEYAPWFVVPIYCVCFVGFVAVPVFRRRALRVAIESRERLRKLELTREAQSAGRKHLRIGVYGRQGAGKTSLIKELLRVRPDDTHNGALVVGGNSGCDLRSFAFDRHVTIVEQRSLDLAGVRQQSLDSRNIDYAIYVTRDPADSFLADRVKRLVGGVRQVFVVRSFADVLETEYNLAGRESVLQQYLLTTSVQKVYPTFVRGHDKINRPSEPHVTGGVEQLRQDILSSLREHRAEELLIHAGETKASRAISTIAHACVAALLESRSRGVASTLSFDPFSSDARKATRDIAEAASAEICEIYNVPFVAVSSASPSSGASAQSPLGNQAGNRISGQSEAAADAATAASILPSELSAIEEEIGVLGASLGTRAFVFGASLLGGATLGALALVPVHLVPVYSVFKATLSAWRDARVRAKDPVSLDFSALWRVFSRADVLVPIAGNFSDASAVGSAIEQGMREAAGGDRAVDGAAANSAMGGANSPVFQLERTRDQENGASLHRVHDTTGANANARVVAGGSVGDVRGLPSGHRGMAANVARRKEDDIVRDVADDFNANSVGVGGVSGQVPKPTLLRAFGRKIAGTGPPSSMADPSTRVAVGGGDGGGEGSGSTRVESDTRERNMGIAHNAGSANGSEVHSGGVGVFGSSVSVSTAVGGSGRAPAANALFVAASAVPRDSPLARAMLGRK* # ORIGINAL: g11010.t1 original gene structure, not modified by PASA NODE_1581_length_10366_cov_39.6934 AUGUSTUS gene 35 1452 . - . ID=g11010;Name=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS mRNA 35 1452 . - . ID=g11010.t1;Parent=g11010;Name=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 1109 1452 . - . ID=g11010.t1.exon1;Parent=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 1109 1452 . - 0 ID=cds.g11010.t1;Parent=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 651 756 . - . ID=g11010.t1.exon2;Parent=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 651 756 . - 1 ID=cds.g11010.t1;Parent=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 35 443 . - . ID=g11010.t1.exon3;Parent=g11010.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 35 443 . - 0 ID=cds.g11010.t1;Parent=g11010.t1 #PROT g11010.t1 g11010 MEEAMSECPATDACGRPSDEPQSIESTDVEMVAADEATPKAAASSAPLADSVTWQSRLSTASDAVAATYRGVVDWVKEHPVDLHAIVGPIQDVLRRQQRPSTYGVEAQQNLERNRALLATHKEMALKSGKKFASFALVGFVSSGKSSLAKALLGLPPEDQRFKVAARSNETLYGEIVAFGDDACELAIVDVPGLHGAAEENRISRQMQDEINFLIADLVSLVDFAIYVANAPIIQPHIDDVAWLRRQLGVERVHVVINKADLLFGDRREEDVTAEKGRIHAQMFPK # PASA_UPDATE: g11012.t1, single gene model update, valid-1, status:[pasa:asmbl_2031,status:12], valid-1 NODE_1581_length_10366_cov_39.6934 . gene 7332 8967 . + . ID=g11012;Name=g11012.t1 NODE_1581_length_10366_cov_39.6934 . mRNA 7332 8967 . + . ID=g11012.t1;Parent=g11012;Name=g11012.t1 NODE_1581_length_10366_cov_39.6934 . five_prime_UTR 7332 7374 . + . ID=g11012.t1.utr5p1;Parent=g11012.t1 NODE_1581_length_10366_cov_39.6934 . exon 7332 8967 . + . ID=g11012.t1.exon1;Parent=g11012.t1 NODE_1581_length_10366_cov_39.6934 . CDS 7375 8442 . + 0 ID=cds.g11012.t1;Parent=g11012.t1 NODE_1581_length_10366_cov_39.6934 . three_prime_UTR 8443 8967 . + . ID=g11012.t1.utr3p1;Parent=g11012.t1 #PROT g11012.t1 g11012 MSLGMAHTLVLVGVRGASQNVASFALDTSSGALSPLASSDCGINPSYMAIHPDGKHAYAVNEHTDGKVVALALDSDTGALTRINEASTSGDDPCHVLVHPSGRWIFVSNYSSRGLSVLPVDTESGALGAAVQVVEAGKHAHHAVLDVGGRFLLAPFLGADAIFQFCFDATTGILSANPAGASAHLPAGAGPRHIFLDEARRRAFVINEIDCTIAAFAWDGIEGVLRGDAVIVSTLPPGISVQPGYSTAHICVSPDGEFVIGSNRGHNSLVVYRVSTAGELGIQLSAIQWESADGRIQMPRDFAITADGRWVIVANQTSDTLTVLSRNAIDGTLSFVAAANVTTGSKPCYVGLLAQ* # ORIGINAL: g11013.t1 original gene structure, not modified by PASA NODE_1581_length_10366_cov_39.6934 AUGUSTUS gene 9328 10144 . + . ID=g11013;Name=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS mRNA 9328 10144 . + . ID=g11013.t1;Parent=g11013;Name=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 9328 9556 . + . ID=g11013.t1.exon1;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 9328 9556 . + 0 ID=cds.g11013.t1;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 9684 9751 . + . ID=g11013.t1.exon2;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 9684 9751 . + 2 ID=cds.g11013.t1;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 9957 10028 . + . ID=g11013.t1.exon3;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 9957 10028 . + 0 ID=cds.g11013.t1;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS exon 10133 10144 . + . ID=g11013.t1.exon4;Parent=g11013.t1 NODE_1581_length_10366_cov_39.6934 AUGUSTUS CDS 10133 10144 . + 0 ID=cds.g11013.t1;Parent=g11013.t1 #PROT g11013.t1 g11013 MDKRCMRLEDGEPAAPGGDAAAHDDNSGNNENGVSNNSEGNVWQAKPRKRRSLSRKDSLQNWVSGFMDKFGADKYNKEIRKIEEDGQIADAAHHVYKVKYIGEQTADGWTGADVAKLATDDILNSL* # ORIGINAL: g5470.t1 original gene structure, not modified by PASA NODE_5067_length_1044_cov_343.946 AUGUSTUS gene 433 531 . + . ID=g5470;Name=g5470.t1 NODE_5067_length_1044_cov_343.946 AUGUSTUS mRNA 433 531 . + . ID=g5470.t1;Parent=g5470;Name=g5470.t1 NODE_5067_length_1044_cov_343.946 AUGUSTUS exon 433 531 . + . ID=g5470.t1.exon1;Parent=g5470.t1 NODE_5067_length_1044_cov_343.946 AUGUSTUS CDS 433 531 . + 0 ID=cds.g5470.t1;Parent=g5470.t1 #PROT g5470.t1 g5470 TIKHEGFAALYKGFIPNYVRLGPWNVAVSSAI* # PASA_UPDATE: g4642.t1, single gene model update, valid-1, status:[pasa:asmbl_4985,status:12], valid-1 NODE_2777_length_5149_cov_35.3345 . gene 111 1285 . - . ID=g4642;Name=g4642.t1 NODE_2777_length_5149_cov_35.3345 . mRNA 111 1285 . - . ID=g4642.t1;Parent=g4642;Name=g4642.t1 NODE_2777_length_5149_cov_35.3345 . five_prime_UTR 1160 1285 . - . ID=g4642.t1.utr5p1;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . exon 1147 1285 . - . ID=g4642.t1.exon1;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . CDS 1147 1159 . - 0 ID=cds.g4642.t1;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . exon 795 994 . - . ID=g4642.t1.exon2;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . CDS 795 994 . - 2 ID=cds.g4642.t1;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . exon 111 621 . - . ID=g4642.t1.exon3;Parent=g4642.t1 NODE_2777_length_5149_cov_35.3345 . CDS 111 621 . - 0 ID=cds.g4642.t1;Parent=g4642.t1;3_prime_partial=true #PROT g4642.t1 g4642 MGSNDNIDHVSILGRECIHIGHNMFEWIASDVKKSVPASKYVCVTDQVVAPLYLDRLVAAFQAVGILLHTKIIPPGEPHKNRATKESIEDWMLTVQCNRDTCVVALGGGVVGDLTGFVAATYLRGVPFVQIPTTLLAMVDSSIGGKTGLDTVHGKNLIGSFHQPAAIYMDLDILATLPERQFSNGMAEVIKTAAIWDADYFDFLDNNADAIMEREPALLQRMVTRSAEIKAEVVTQDEKEG # ORIGINAL: g4643.t1 original gene structure, not modified by PASA NODE_2777_length_5149_cov_35.3345 AUGUSTUS gene 2560 4724 . - . ID=g4643;Name=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS mRNA 2560 4724 . - . ID=g4643.t1;Parent=g4643;Name=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS exon 4456 4724 . - . ID=g4643.t1.exon1;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS CDS 4456 4724 . - 0 ID=cds.g4643.t1;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS exon 3883 4132 . - . ID=g4643.t1.exon2;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS CDS 3883 4132 . - 1 ID=cds.g4643.t1;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS exon 3424 3571 . - . ID=g4643.t1.exon3;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS CDS 3424 3571 . - 0 ID=cds.g4643.t1;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS exon 3159 3279 . - . ID=g4643.t1.exon4;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS CDS 3159 3279 . - 2 ID=cds.g4643.t1;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS exon 2560 2863 . - . ID=g4643.t1.exon5;Parent=g4643.t1 NODE_2777_length_5149_cov_35.3345 AUGUSTUS CDS 2560 2863 . - 1 ID=cds.g4643.t1;Parent=g4643.t1 #PROT g4643.t1 g4643 MLSLHKSHDPFIVEAQAAWGKFCSFNLRDAELGRDISAKEFADSISMSEGARRVFESTFLQYNALSWEDCGSAECTREDGNWDYGADNYRLAGSYKLLIDYYRRRIGDADIRTDWPVVSIRCDSARSKVSVENSVGSAVVCDAVVVTVPLSILRDGDIEFDPPLSAEKIRSFKAVSINPAMKVFVRLRRRIWADDVGLVFATNASAFMPQLWFSARKCRGESVEDMEYIAAGFCAGPMVQGRAYWDDRRVIALFLSQLDDMFGSPEDTKPASTAYTGFGCVANWASNRYIRGGYSGATVGAYGMREVLAAPAHERIFFAGEATGLKCSACVHNAIESGVRAASEVCQAFSAHASRTVPVKSQM* # PASA_UPDATE: g9328.t1, single gene model update, valid-1, status:[pasa:asmbl_6292,status:12],[pasa:asmbl_6293,status:12], valid-1 NODE_3603_length_3130_cov_38.8007 . gene 1978 3085 . - . ID=g9328;Name=g9328.t1 NODE_3603_length_3130_cov_38.8007 . mRNA 1978 3085 . - . ID=g9328.t1;Parent=g9328;Name=g9328.t1 NODE_3603_length_3130_cov_38.8007 . five_prime_UTR 3066 3085 . - . ID=g9328.t1.utr5p1;Parent=g9328.t1 NODE_3603_length_3130_cov_38.8007 . exon 1978 3085 . - . ID=g9328.t1.exon1;Parent=g9328.t1 NODE_3603_length_3130_cov_38.8007 . CDS 2127 3065 . - 0 ID=cds.g9328.t1;Parent=g9328.t1 NODE_3603_length_3130_cov_38.8007 . three_prime_UTR 1978 2126 . - . ID=g9328.t1.utr3p1;Parent=g9328.t1 #PROT g9328.t1 g9328 MVFNIPVIRIPITTRGRASIQLDGPLNLPNGIAVRLLSYDWHEGQMYDPSHMRRQGYEDARTLSSPRQISSGLLIHIHGGGFVAQSSKSHEVYLRLWAKSLRIPILSIDYSLAPEAPYPQAFEECLYTYAWALRNGRRLGSTLERIVLAGDSAGANLCLALALKTKAMGIRSPNGLMLSYPPVLVRYTPSPARILSVMDPLLSLGVLKNCLGAYAGTAADTTDPFLSPWFADDAMIKGLPSVSLVVGSLDPLLDDSIEFARRARSLGVDLDFKIFDDLPHGFLNFARATEPTSKATDHIIGRLHAMFGRERL* # ORIGINAL: g9327.t1 original gene structure, not modified by PASA NODE_3603_length_3130_cov_38.8007 AUGUSTUS gene 88 1661 . + . ID=g9327;Name=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS mRNA 88 1661 . + . ID=g9327.t1;Parent=g9327;Name=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS exon 88 297 . + . ID=g9327.t1.exon1;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS CDS 88 297 . + 0 ID=cds.g9327.t1;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS exon 537 803 . + . ID=g9327.t1.exon2;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS CDS 537 803 . + 0 ID=cds.g9327.t1;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS exon 1142 1325 . + . ID=g9327.t1.exon3;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS CDS 1142 1325 . + 0 ID=cds.g9327.t1;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS exon 1510 1661 . + . ID=g9327.t1.exon4;Parent=g9327.t1 NODE_3603_length_3130_cov_38.8007 AUGUSTUS CDS 1510 1661 . + 2 ID=cds.g9327.t1;Parent=g9327.t1 #PROT g9327.t1 g9327 MRVWDILAGGRLLQIVSNHQKTITCLALDSSGRRLISGSLDQHAKIYDSSDFRVVHSIKYTSPVLSIAISPNDTHLVAGMASGLLSIRKRAIATADIARQQRRKSASRAGTYRFFVRGKNHRPADDDFRVELHRKKRLRPYDLLLRRFRYHDALDAVLTSGQRPVVVISLLEELVARDGLRLAIAGRDEATLQPLMLFLTAHVANPRYASLLIDVCSVVLDVYSNSVGLSMRIDELFVRLQRKVNGEIDFQKKMCELLGSLELLMASSAR* # ORIGINAL: g3041.t1 original gene structure, not modified by PASA NODE_7802_length_406_cov_33.0755_potentialcontaminant AUGUSTUS gene 2 406 . + . ID=g3041;Name=g3041.t1 NODE_7802_length_406_cov_33.0755_potentialcontaminant AUGUSTUS mRNA 2 406 . + . ID=g3041.t1;Parent=g3041;Name=g3041.t1 NODE_7802_length_406_cov_33.0755_potentialcontaminant AUGUSTUS exon 2 406 . + . ID=g3041.t1.exon1;Parent=g3041.t1 NODE_7802_length_406_cov_33.0755_potentialcontaminant AUGUSTUS CDS 2 406 . + 0 ID=cds.g3041.t1;Parent=g3041.t1 #PROT g3041.t1 g3041 KQDYEILGRVDISDLNANKMLRFQHEHYFPLAMMSGIILPTLVCGLGWGDWAGGYFYAALLKMVLIHHGTFCINSLAHTNVFGAMQQYSEEHSAYDSVACALISFGEGYHNFHHEFSQDFRNGLKWFDYDPTKWT # ORIGINAL: g10730.t1 original gene structure, not modified by PASA NODE_2411_length_6379_cov_35.3426 AUGUSTUS gene 3219 4252 . - . ID=g10730;Name=g10730.t1 NODE_2411_length_6379_cov_35.3426 AUGUSTUS mRNA 3219 4252 . - . ID=g10730.t1;Parent=g10730;Name=g10730.t1 NODE_2411_length_6379_cov_35.3426 AUGUSTUS exon 4159 4252 . - . ID=g10730.t1.exon1;Parent=g10730.t1 NODE_2411_length_6379_cov_35.3426 AUGUSTUS CDS 4159 4252 . - 0 ID=cds.g10730.t1;Parent=g10730.t1 NODE_2411_length_6379_cov_35.3426 AUGUSTUS exon 3219 3883 . - . ID=g10730.t1.exon2;Parent=g10730.t1 NODE_2411_length_6379_cov_35.3426 AUGUSTUS CDS 3219 3883 . - 2 ID=cds.g10730.t1;Parent=g10730.t1 #PROT g10730.t1 g10730 MLRTVFASSTGLARSLSLSPARVVISVASFHGTAIDTPAPNTPMDAAVRGRRMRRSPRPSPSDGVIIYPEMHPEHPRNAIDDMLNGRFSVPFPTLPQHTYNIIRHIDNMVNRVYQGPESGTRRGVKIAAPIIRGSPAAQEVPFAMDAGGILAAADAFKKDTPRNDDVGPAWMVGSDAGSTTVNSVSADALLTELALMSLSGKNTSVVGDAIADIPDMHATSVIRKRRKKMKKHKHKKWLKKHRTELRQKKRG* # PASA_UPDATE: g10729.t1, single gene model update, valid-1, status:[pasa:asmbl_4251,status:12], valid-1 NODE_2411_length_6379_cov_35.3426 . gene 150 2499 . + . ID=g10729;Name=g10729.t1 NODE_2411_length_6379_cov_35.3426 . mRNA 150 2499 . + . ID=g10729.t1;Parent=g10729;Name=g10729.t1 NODE_2411_length_6379_cov_35.3426 . exon 150 244 . + . ID=g10729.t1.exon1;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . CDS 150 244 . + 0 ID=cds.g10729.t1;Parent=g10729.t1;5_prime_partial=true NODE_2411_length_6379_cov_35.3426 . exon 809 891 . + . ID=g10729.t1.exon2;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . CDS 809 891 . + 1 ID=cds.g10729.t1;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . exon 1332 1445 . + . ID=g10729.t1.exon3;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . CDS 1332 1445 . + 2 ID=cds.g10729.t1;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . exon 1741 1860 . + . ID=g10729.t1.exon4;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . CDS 1741 1860 . + 2 ID=cds.g10729.t1;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . exon 2329 2499 . + . ID=g10729.t1.exon5;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . CDS 2329 2450 . + 2 ID=cds.g10729.t1;Parent=g10729.t1 NODE_2411_length_6379_cov_35.3426 . three_prime_UTR 2451 2499 . + . ID=g10729.t1.utr3p1;Parent=g10729.t1 #PROT g10729.t1 g10729 ELRNSGPSVFESEILTRFFSQTEADIHPPDMRQEEGSSKSSFRIPTISRMKKMPMSVSLDNVAKFQARANADFEATESKQLSFSKGDMIDILAQDDEEWWFAQIGNKQGWVPANLMGAADDKDRVRTLSVGGRKSTIIMRRGYEDESSRDAFRRRAASDDNLAFVANPLARPRASIA* # ORIGINAL: g5167.t1 original gene structure, not modified by PASA NODE_3391_length_3571_cov_42.7557 AUGUSTUS gene 1389 3133 . - . ID=g5167;Name=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS mRNA 1389 3133 . - . ID=g5167.t1;Parent=g5167;Name=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 3131 3133 . - . ID=g5167.t1.exon1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 3131 3133 . - 0 ID=cds.g5167.t1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 2981 3028 . - . ID=g5167.t1.exon2;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 2981 3028 . - 0 ID=cds.g5167.t1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 2529 2692 . - . ID=g5167.t1.exon3;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 2529 2692 . - 0 ID=cds.g5167.t1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 2249 2336 . - . ID=g5167.t1.exon4;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 2249 2336 . - 1 ID=cds.g5167.t1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 1820 1982 . - . ID=g5167.t1.exon5;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 1820 1982 . - 0 ID=cds.g5167.t1;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS exon 1389 1513 . - . ID=g5167.t1.exon6;Parent=g5167.t1 NODE_3391_length_3571_cov_42.7557 AUGUSTUS CDS 1389 1513 . - 2 ID=cds.g5167.t1;Parent=g5167.t1 #PROT g5167.t1 g5167 MAVKFNYSQDDLDLVQMVLDHVCSMRDMLSHWVSDAATTLANDFIGIGKRCAKGAIRELAALATKKRRSCARALDALGDLVDSRSALSMLHQRTWVPAGGQLLLARYLVETLLCVRCGGGGLKAKDVSRSQRASLTLLLRRLCSAPSLLWHGRLSVAVASNTSDLCLREFHIDLAGVSQAGCNRRLYSTVAGMLMF* # ORIGINAL: g965.t1 original gene structure, not modified by PASA NODE_583_length_20622_cov_37.5695 AUGUSTUS gene 133 2830 . + . ID=g965;Name=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS mRNA 133 2830 . + . ID=g965.t1;Parent=g965;Name=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 133 282 . + . ID=g965.t1.exon1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 133 282 . + 0 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 538 751 . + . ID=g965.t1.exon2;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 538 751 . + 0 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 970 1221 . + . ID=g965.t1.exon3;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 970 1221 . + 2 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 1471 1587 . + . ID=g965.t1.exon4;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 1471 1587 . + 2 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 1846 1967 . + . ID=g965.t1.exon5;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 1846 1967 . + 2 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 2165 2318 . + . ID=g965.t1.exon6;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 2165 2318 . + 0 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 2543 2584 . + . ID=g965.t1.exon7;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 2543 2584 . + 2 ID=cds.g965.t1;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 2709 2830 . + . ID=g965.t1.exon8;Parent=g965.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 2709 2830 . + 2 ID=cds.g965.t1;Parent=g965.t1 #PROT g965.t1 g965 LMKRIGRPLLPSQLEFLVRQMDADGNGTIEFEEFLSGLQIMLGDMNVDEEAVLRKEIEVCEEACNSLLGYIKVVDNILASKNHNELRLMQELYDFSHENKNETFAKFIDTLAHTRRKFTGLIDDIESKWDYILTTLEEEAEGEGESDNDADEMQNRRQSTVTKSSAPSEAYHDTTSADLDHILDDAQGLEAEVPRQRTVSILPRKESTATKRSRKVSQAQPSTSRKNSEEDGGAEAPRAVSFFNLTSTENAIAVYYETQWQRFRLGSDYTFKDLLKDAAEFFDVKGGFLADDTGAVLPLSSTVYSEYQRNPHMAVRLMTRSDGLTSPITRTARSLTDIGKRAQAGSLVDKVIAGDRIGTRSGKAPATSISSPAGTNYSSLNGTTPVVPQG* # ORIGINAL: g967.t1 original gene structure, not modified by PASA NODE_583_length_20622_cov_37.5695 AUGUSTUS gene 4829 5872 . + . ID=g967;Name=g967.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS mRNA 4829 5872 . + . ID=g967.t1;Parent=g967;Name=g967.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 4829 5872 . + . ID=g967.t1.exon1;Parent=g967.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 4829 5872 . + 0 ID=cds.g967.t1;Parent=g967.t1 #PROT g967.t1 g967 MEGFHVVDLFAGCGGLSAGFEDEGFIVTGYEMWADACRVYSRNLKGLILHETITATSTIQAHRVLIGGPPCQPFSTTGSQRGQRDARDMVPAVVAAMAAHRPLVAIVENVANLAGPQHAAYLESVFDEMRSLGYTVTHRVLDASAFGVPQKRKRLFIVAHFGGFEFPNALSSSPRTVAQTLPRNSFEGRTADMHPELVLTPAQDIYIAKYEARSSCIRPRDLHPDKPSRTLTCRNLCGATSDMVRVRLNDGRRRQLTVEEAALLQTFPRGYFNSVSRKTAMQMIGNSVPPLLSRAIAAQVALYLVNVTIVSPPKSMRTQEMHPICFQSEDRQRQAAANETTQETEKI* # ORIGINAL: g966.t1 original gene structure, not modified by PASA NODE_583_length_20622_cov_37.5695 AUGUSTUS gene 3910 4551 . - . ID=g966;Name=g966.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS mRNA 3910 4551 . - . ID=g966.t1;Parent=g966;Name=g966.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 3910 4551 . - . ID=g966.t1.exon1;Parent=g966.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 3910 4551 . - 0 ID=cds.g966.t1;Parent=g966.t1 #PROT g966.t1 g966 MATSVVGMCGVCAQNPPKYKCPRCKLPYCGIPCYKTHKETPCEVSTATAAATASAAQADATSAPPPQQDLKEQHHQQRQQQQQQHEHGEGHQSDASGAVSSGISDPVASALPSVEKPVALDATAALRAAFPSSDGTFGLTEAQMARLQGAEHVVQMMRNPHLRELILKVGTAKSENAEKELEAARTTAIFEEFAHECVRICSDGADGGAPTAH* # ORIGINAL: g968.t1 original gene structure, not modified by PASA NODE_583_length_20622_cov_37.5695 AUGUSTUS gene 6542 8038 . + . ID=g968;Name=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS mRNA 6542 8038 . + . ID=g968.t1;Parent=g968;Name=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 6542 6588 . + . ID=g968.t1.exon1;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 6542 6588 . + 0 ID=cds.g968.t1;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 6813 7117 . + . ID=g968.t1.exon2;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 6813 7117 . + 1 ID=cds.g968.t1;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 7245 7567 . + . ID=g968.t1.exon3;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 7245 7567 . + 2 ID=cds.g968.t1;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 7781 8038 . + . ID=g968.t1.exon4;Parent=g968.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 7781 8038 . + 0 ID=cds.g968.t1;Parent=g968.t1 #PROT g968.t1 g968 MANKVEIAFLGLGNMGHAIAVNFVEAGFKVHVYNRTFSKCDPLVALGATGHKTAKEAASAVGKDGFVFSMLANDKALNEVVADILSEGGICAGAAHFSMSTVSPDTTRALAQVHAEKGVFLISSPVFGRPEAAKAKRLVNLVSGDQHVIERARESGVFEAIGHQLHNYGEEVGAANVAKLCGNFLIAASMECMGEAAALAEKNGLDRIQVIEMLTGSIFSCPVYQGYGNLIVRRNHLPAGFEMELGLKDVTLMLDVAQKSRTPLPVAKLVHDRLLSGVAKGRSGMDWSALGLAASEDAGIDVSAALPKKE* # PASA_UPDATE: g969.t1, single gene model update, valid-1, status:[pasa:asmbl_8310,status:12],[pasa:asmbl_8311,status:12],[pasa:asmbl_8312,status:12], valid-1 NODE_583_length_20622_cov_37.5695 . gene 8498 13809 . - . ID=g969;Name=g969.t1 NODE_583_length_20622_cov_37.5695 . mRNA 8498 13809 . - . ID=g969.t1;Parent=g969;Name=g969.t1 NODE_583_length_20622_cov_37.5695 . five_prime_UTR 13134 13809 . - . ID=g969.t1.utr5p1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . exon 13023 13809 . - . ID=g969.t1.exon1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . CDS 13023 13133 . - 0 ID=cds.g969.t1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . exon 12201 12785 . - . ID=g969.t1.exon2;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . CDS 12201 12785 . - 0 ID=cds.g969.t1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . exon 11062 11966 . - . ID=g969.t1.exon3;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . CDS 11062 11966 . - 0 ID=cds.g969.t1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . exon 9628 10768 . - . ID=g969.t1.exon4;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . CDS 9628 10768 . - 1 ID=cds.g969.t1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . exon 8498 9285 . - . ID=g969.t1.exon5;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . CDS 8707 9285 . - 0 ID=cds.g969.t1;Parent=g969.t1 NODE_583_length_20622_cov_37.5695 . three_prime_UTR 8498 8706 . - . ID=g969.t1.utr3p1;Parent=g969.t1 #PROT g969.t1 g969 MAPATSNPELSPADDALRQLLTFFSQHDPFAKKTDPQLRVVQDACTELISRDYVIGLVENTHGELCPSYPLDIVVMESEKHRDGSEGPRINDGRSLAVRFRNARFSRVRARFVVPVILVGGRNICRSGTLSQEAEVTLNIAQDKFRSFMSWRPREGPAKTLAGGGALSVGGGSRDVNVEGSDGSDGDVSGDSGGGDDAANTSLMARQRSADIQLLKGLCVRYICDLMVENKKVKYGLNVCSSEKVDSQGRYMKAFSVVSIPFPGVEFFHDYKHYKDSASQLRFDWTQPFVNATLSIPDEAAQLSASGWEGTPCTAACAHAPSTQHHTASAETANGSVETSGSASPTAISTKHNTDGSEDDVRWTDYRAWDVTVLTRNYLHLLLGMAMGGDDTRPDTGADSSAKACQENGQSAASEEDEEGRSGGDGDDISAAVNNAMKNGILDDAAGTIGGAGGSSSDSGDNADAKQESGRGTRSRASDGLDGTLVHCISGWDRTPLFISLLRLSLWADGVVHASLSADEILYLTLGYDWMLFGHLLKDRYQRGEDILFFCFDFLRFIAGDSFSMSSRYASTQSGVPSDSSRTSSSNNSNSNNNNNNNNNNNKSIRSNNKNGTTTTNSNNDVCMRSSAEQPRRDSRETIAPPLYNAFDAEFDDAASIVPMVTDGISYDAQAALLDIEHEDDDNTAEIRRRLSSPPEARQLLANVTGVTSRDDPFARDDVMPVVVPVKSGLSRVLALSPSPLPLLLDEALSTTTTTAAAAAAATTTAIANVAATTALSTTATSTATATTTTTTETSQSCHLGATTRGHLTDAMDVPAVVSASGAVLGTSVARSASMPMPINGMRRDSRGAPLGSFVGSLGFSTSLTDGFDVESLEEYSKDSAIGGGRRNSSGHTRRSPRKKADESLSDGDDVESAVLQRDVPPTVSGSWQFIATGMGNKTHSTASVASRAQEAANVPSCSSSFSASGVSGVYPDGTPTDTGLRVVDDSLGVEGSFVNNNNGGGGGGGERDFGDAVLQACVGSHDGLSLDNGDLDEIVARCGIHCTLLTDRARRLHAVRSRFVRAHDACFGPSKGFRVASGPTGVSASATPESGPASASSYFFTLFKF* # ORIGINAL: g971.t1 original gene structure, not modified by PASA NODE_583_length_20622_cov_37.5695 AUGUSTUS gene 18425 19907 . - . ID=g971;Name=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS mRNA 18425 19907 . - . ID=g971.t1;Parent=g971;Name=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 19815 19907 . - . ID=g971.t1.exon1;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 19815 19907 . - 0 ID=cds.g971.t1;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 19381 19527 . - . ID=g971.t1.exon2;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 19381 19527 . - 0 ID=cds.g971.t1;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 18985 19097 . - . ID=g971.t1.exon3;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 18985 19097 . - 0 ID=cds.g971.t1;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS exon 18425 18470 . - . ID=g971.t1.exon4;Parent=g971.t1 NODE_583_length_20622_cov_37.5695 AUGUSTUS CDS 18425 18470 . - 1 ID=cds.g971.t1;Parent=g971.t1 #PROT g971.t1 g971 MYLGIIQGHLDQKNAMLEVDSFIARDLRPDQIGDLVNSIGSWLGKCDVILKAIGEQARAADSALEEKSRREVALAAEIETARKSIKSFDDNMAVDGHRGHEFNSLEYFHEDSRHKGKSKATARTKSGGPIRR* # PASA_UPDATE: g970.t1, single gene model update, valid-1, status:[pasa:asmbl_8313,status:3], valid-1 NODE_583_length_20622_cov_37.5695 . gene 14133 18118 . + . ID=g970;Name=g970.t1 NODE_583_length_20622_cov_37.5695 . mRNA 14133 18118 . + . ID=g970.t1;Parent=g970;Name=g970.t1 NODE_583_length_20622_cov_37.5695 . five_prime_UTR 14133 14517 . + . ID=g970.t1.utr5p1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 14133 14844 . + . ID=g970.t1.exon1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 14518 14844 . + 0 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 15230 15430 . + . ID=g970.t1.exon2;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 15230 15430 . + 0 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 15750 16326 . + . ID=g970.t1.exon3;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 15750 16326 . + 0 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 16681 16763 . + . ID=g970.t1.exon4;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 16681 16763 . + 2 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 17052 17174 . + . ID=g970.t1.exon5;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 17052 17174 . + 0 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 17510 17645 . + . ID=g970.t1.exon6;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 17510 17645 . + 0 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . exon 17851 18118 . + . ID=g970.t1.exon7;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . CDS 17851 17957 . + 2 ID=cds.g970.t1;Parent=g970.t1 NODE_583_length_20622_cov_37.5695 . three_prime_UTR 17958 18118 . + . ID=g970.t1.utr3p1;Parent=g970.t1 #PROT g970.t1 g970 MALVDDPLFIVRQLQYTWTMYDDSGMSELVITDHAPVAFPSSSGRPGANASASSLSNSVNDSDVSSPSDSPPYSTSYDIMLSPSNSFTQASRAVGRAEEGKEQKGPDHKVVVFKDKDAVGLSAQPLPSDPSVFYREAIPPPAGNPSSKLTLIVKGSSQKVVTTPFQEYAQFGGDGQVGMARTVPLEIFFPFAEDEDDKPLKLVALGNATVDDVIGLIAYKYTEAGRMPKLTSGVENYCLRMVEDDGSPDMDFPALDRKQPIQKFGFDQLALCETGKGGGVQRKMSSRPDPKSTTTFIRIHVPSQGCTVLNVKSCDILLSDVLDLVRKKRALPKGQHTLELVDSPGVELDLNQTLQSIHVMEFNLIHKFSKRRDIQEDVDKTKNKDVENSLTVHQYKSYEVWAKHKFSGNQEMMIGIDADKISVIPYGTLGFFQKQKLVSHDMDDVVNCQLLEEKSPRTFRFCHFNGTEFKNHYFEAKVNEEAKEIVNKIRSIIESRPSEARTNYIAYQERKLRKKSL* # ORIGINAL: g411.t1 original gene structure, not modified by PASA NODE_1602_length_10234_cov_42.2866 AUGUSTUS gene 1815 4576 . + . ID=g411;Name=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS mRNA 1815 4576 . + . ID=g411.t1;Parent=g411;Name=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 1815 2056 . + . ID=g411.t1.exon1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 1815 2056 . + 0 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 2324 2407 . + . ID=g411.t1.exon2;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 2324 2407 . + 1 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 2551 2659 . + . ID=g411.t1.exon3;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 2551 2659 . + 1 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 3134 3143 . + . ID=g411.t1.exon4;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 3134 3143 . + 0 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 3365 3422 . + . ID=g411.t1.exon5;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 3365 3422 . + 2 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 3708 3978 . + . ID=g411.t1.exon6;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 3708 3978 . + 1 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 4147 4242 . + . ID=g411.t1.exon7;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 4147 4242 . + 0 ID=cds.g411.t1;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 4394 4576 . + . ID=g411.t1.exon8;Parent=g411.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 4394 4576 . + 0 ID=cds.g411.t1;Parent=g411.t1 #PROT g411.t1 g411 MDPSPARRGTLGVGGGLSGMTGSDTSAGSTGNPNFLPAFFMGSSSNAHQPSVSQSSSQQGGFSTGGGFGWDGSDELGRRKSPIAPSTGWQAFNFDAPQKTPGRKTDEQLSSSPRSRPFFPTRSLYDSPSQGVSPMIERPQQEQAWGQRGSGGLFQSPQPSDSFSGQQGGLGGQFGTPSQAATANYQQPHLYQQQQQQQQQQQQQQQQQYPQGDEADRWVTIFGFPPSATSFVLQQFQAYGDIVRHVTAPNGGNWMHVQYQSRLQASKARSKSGKIFGGTIMVGVVPCLDRSVMEGGPAVALPRPEAGLAPRSLLASQHTLAGEGDAQGPFAAPQKTTNAVSRMLEYVGWW* # PASA_UPDATE: g413.t1, single gene model update, valid-1, status:[pasa:asmbl_2116,status:12], valid-1 NODE_1602_length_10234_cov_42.2866 . gene 9133 9981 . - . ID=g413;Name=g413.t1 NODE_1602_length_10234_cov_42.2866 . mRNA 9133 9981 . - . ID=g413.t1;Parent=g413;Name=g413.t1 NODE_1602_length_10234_cov_42.2866 . exon 9571 9981 . - . ID=g413.t1.exon1;Parent=g413.t1 NODE_1602_length_10234_cov_42.2866 . CDS 9571 9981 . - 0 ID=cds.g413.t1;Parent=g413.t1 NODE_1602_length_10234_cov_42.2866 . exon 9133 9449 . - . ID=g413.t1.exon2;Parent=g413.t1 NODE_1602_length_10234_cov_42.2866 . CDS 9243 9449 . - 0 ID=cds.g413.t1;Parent=g413.t1 NODE_1602_length_10234_cov_42.2866 . three_prime_UTR 9133 9242 . - . ID=g413.t1.utr3p1;Parent=g413.t1 #PROT g413.t1 g413 MGACFNLGTLSLLLLPIANFRSHLRVVRFSLLQLIFVRPALLIVAQVLYGDGEKDKTLGSRNRGYTVISLAVLASMLLCMWALFVLYRATRKILANYLFGLKFLAVKLILVISIIQNFIFMILVRVNAFGPTSLMNKYARATMWMNFLLVIESVIFIFLFRKAYPTSDHDIHVATETIRINSAPSSTFADGAEKESSLDPIMNRA* # ORIGINAL: g410.t1 original gene structure, not modified by PASA NODE_1602_length_10234_cov_42.2866 AUGUSTUS gene 198 1050 . + . ID=g410;Name=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS mRNA 198 1050 . + . ID=g410.t1;Parent=g410;Name=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 198 287 . + . ID=g410.t1.exon1;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 198 287 . + 0 ID=cds.g410.t1;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 442 572 . + . ID=g410.t1.exon2;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 442 572 . + 0 ID=cds.g410.t1;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 728 836 . + . ID=g410.t1.exon3;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 728 836 . + 1 ID=cds.g410.t1;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS exon 991 1050 . + . ID=g410.t1.exon4;Parent=g410.t1 NODE_1602_length_10234_cov_42.2866 AUGUSTUS CDS 991 1050 . + 0 ID=cds.g410.t1;Parent=g410.t1 #PROT g410.t1 g410 LPEWKEGDECQKCGDPFFWNFKKKINANRQHHCRHCGKALCDKCVSKKSVCPRMGFELPVRMCEECVRSLTPKDTKSRVQCFDAKHPILYMQWIDETRHLVTSGFDGTIKIWNFPAEPAKTDVSSDDED* # PASA_UPDATE: g412.t1, single gene model update, valid-1, status:[pasa:asmbl_2117,status:12], valid-1 NODE_1602_length_10234_cov_42.2866 . gene 4669 8592 . - . ID=g412;Name=g412.t1 NODE_1602_length_10234_cov_42.2866 . mRNA 4669 8592 . - . ID=g412.t1;Parent=g412;Name=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 8536 8592 . - . ID=g412.t1.exon1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 8536 8592 . - 0 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 8361 8413 . - . ID=g412.t1.exon2;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 8361 8413 . - 0 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 8025 8124 . - . ID=g412.t1.exon3;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 8025 8124 . - 1 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 7631 7776 . - . ID=g412.t1.exon4;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 7631 7776 . - 0 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 7340 7434 . - . ID=g412.t1.exon5;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 7340 7434 . - 1 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 7019 7179 . - . ID=g412.t1.exon6;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 7019 7179 . - 2 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 6624 6800 . - . ID=g412.t1.exon7;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 6624 6800 . - 0 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . exon 4669 6240 . - . ID=g412.t1.exon8;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . CDS 4822 6240 . - 0 ID=cds.g412.t1;Parent=g412.t1 NODE_1602_length_10234_cov_42.2866 . three_prime_UTR 4669 4821 . - . ID=g412.t1.utr3p1;Parent=g412.t1 #PROT g412.t1 g412 MLTNNAVEVRDESSGSYFKAFLKDFSTSDVLVAYENEWRPRGWVSITAVRAAPLPAVVSPGFPSAHDIVEVQASVDAAVPASWFPAVVLNAKRGVCLVKFANGSEDMVELERIRPAAPSEPVDLSHLVRFEIGLPQPSIVNYCRQEHVHDDFVRVTQLLSASVTDRNSLVVVGDHSAIDRARLLAPVHIRGIIDIARIRPLNPQAQEVREPDSLFEERFVVPQGLIGLAIGKKGANINRARDVTGVDDIVIDDATSSFIVRGKTRSAVEAARAILELSEAVVPIPSQDIGMIIGRGGKNLQEVTERSQVLSIRVLDPPTGAGPDVPVSVVITGAKEAVDNAKLLIDFQLKNAQTMNELAGEFDRTSFDRKAPGARGRPIYGDRSDARDDARDARGAYGRQRAPATVERSDDDAAPRDPRRRPNNAGGARSAAAQQAADSAPKAGGGKGAANASAPVNGSAGGRGGQRQPQQAQAQQPQPKGSKGLAQPQSQPKTQQALPPTPKADQAQAPRPKQARAPATAIPATAVPVSSGGNQPAVAKQTQQQPRPKQTQPQQQQAAQAAQAAQNGAENVAEPSRRSRARKSGGASAVAAQATVLTPSSREGAAGAESAASGAVMAADGSAAATGEKKRRGKGRGGRKDGAGADSAAVDGDASGAQTSGDAATAAPASGDTAAVAVAAAKDQRPPRQRRRKEGEGAGAAESKANVDAPAAGAHVAPDATAAAPAVEPAADASA* # PASA_UPDATE: g9429.t1, single gene model update, valid-1, status:[pasa:asmbl_9110,status:12], valid-1 NODE_7348_length_446_cov_47.9084 . gene 2 446 . + . ID=g9429;Name=g9429.t1 NODE_7348_length_446_cov_47.9084 . mRNA 2 446 . + . ID=g9429.t1;Parent=g9429;Name=g9429.t1 NODE_7348_length_446_cov_47.9084 . five_prime_UTR 2 2 . + . ID=g9429.t1.utr5p1;Parent=g9429.t1 NODE_7348_length_446_cov_47.9084 . exon 2 446 . + . ID=g9429.t1.exon1;Parent=g9429.t1 NODE_7348_length_446_cov_47.9084 . CDS 3 446 . + 0 ID=cds.g9429.t1;Parent=g9429.t1;5_prime_partial=true;3_prime_partial=true #PROT g9429.t1 g9429 SLGVCSGCVNNTENGVGNKCDVCKADHKRFNKASYVNIDTPATQEQMRYEKCITCTCHNHEDVSPGASICDEFTGVCSACKDNTKNGDDGECEKCLTDYFRGLDGTYVPGDDVCRVCDLADGTGCAVHQVIDACLSCDDQCYGDNNKC # PASA_UPDATE: g12324.t1, single gene model update, valid-1, status:[pasa:asmbl_802,status:3], valid-1 # PASA_UPDATE: g12324.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_801,status:12], valid-1 NODE_1207_length_13043_cov_39.7659 . gene 8805 10602 . - . ID=g12324;Name=g12324.t1 NODE_1207_length_13043_cov_39.7659 . mRNA 8805 10602 . - . ID=g12324.t1;Parent=g12324;Name=g12324.t1 NODE_1207_length_13043_cov_39.7659 . five_prime_UTR 10521 10602 . - . ID=g12324.t1.utr5p1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . exon 10467 10602 . - . ID=g12324.t1.exon1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . CDS 10467 10520 . - 0 ID=cds.g12324.t1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . exon 10091 10222 . - . ID=g12324.t1.exon2;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . CDS 10091 10222 . - 0 ID=cds.g12324.t1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . exon 9815 9967 . - . ID=g12324.t1.exon3;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . CDS 9815 9967 . - 0 ID=cds.g12324.t1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . exon 9319 9457 . - . ID=g12324.t1.exon4;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . CDS 9319 9457 . - 0 ID=cds.g12324.t1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . exon 8805 9108 . - . ID=g12324.t1.exon5;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . CDS 9050 9108 . - 2 ID=cds.g12324.t1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . three_prime_UTR 8805 9049 . - . ID=g12324.t1.utr3p1;Parent=g12324.t1 NODE_1207_length_13043_cov_39.7659 . mRNA 9137 10602 . - . ID=g12324.t1.1.5b6be70a;Parent=g12324;Name=g12324.t1 NODE_1207_length_13043_cov_39.7659 . five_prime_UTR 10521 10602 . - . ID=g12324.t1.1.5b6be70a.utr5p1;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . exon 10467 10602 . - . ID=g12324.t1.1.5b6be70a.exon1;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . CDS 10467 10520 . - 0 ID=cds.g12324.t1.1.5b6be70a;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . exon 10091 10222 . - . ID=g12324.t1.1.5b6be70a.exon2;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . CDS 10091 10222 . - 0 ID=cds.g12324.t1.1.5b6be70a;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . exon 9815 9967 . - . ID=g12324.t1.1.5b6be70a.exon3;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . CDS 9815 9967 . - 0 ID=cds.g12324.t1.1.5b6be70a;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . exon 9137 9457 . - . ID=g12324.t1.1.5b6be70a.exon4;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . CDS 9155 9457 . - 0 ID=cds.g12324.t1.1.5b6be70a;Parent=g12324.t1.1.5b6be70a NODE_1207_length_13043_cov_39.7659 . three_prime_UTR 9137 9154 . - . ID=g12324.t1.1.5b6be70a.utr3p1;Parent=g12324.t1.1.5b6be70a #PROT g12324.t1 g12324 MAAAVATNPRGIPVAPFVADPNDFLKDGETVETLLEKFAERNQKYKFMETQLQMKKKSLKSKIPDITATLEMVRYLKQRCDAGETFKTDFELCDTVFAEATIAPTDKVCLWLGANVMLEYDVAEADGLLQKNLDTATRSLEQVVEDLHFLRDQITTMEVNWARVFNWDVKRRRKAEQQ* #PROT g12324.t1.1.5b6be70a g12324 MAAAVATNPRGIPVAPFVADPNDFLKDGETVETLLEKFAERNQKYKFMETQLQMKKKSLKSKIPDITATLEMVRYLKQRCDAGETFKTDFELCDTVFAEATIAPTDKVCLWLGANVMLEYDVAEADGLLQKNLDTATRSLEQVVEDLHFLRDQITTMEVSIRPPNPLLCSVVNACVCSCIYQYVVCVEPMFCLVMAVRVDENVVCLSFFCVLP* # ORIGINAL: g12323.t1 original gene structure, not modified by PASA NODE_1207_length_13043_cov_39.7659 AUGUSTUS gene 6469 8181 . + . ID=g12323;Name=g12323.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS mRNA 6469 8181 . + . ID=g12323.t1;Parent=g12323;Name=g12323.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS exon 6469 8181 . + . ID=g12323.t1.exon1;Parent=g12323.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS CDS 6469 8181 . + 0 ID=cds.g12323.t1;Parent=g12323.t1 #PROT g12323.t1 g12323 MPQGVQLKLADKQRIITTRNDIEREKEAKTAKKIVRLTAERTGFSEHTVWRVWSEYRRNQGGFDAPPTKRYYKKGRQGLNLEPWHEHIMMTIEYLRETNPMWTSSMLNSRLRDYGLVVSHSRLYKELKAMGVPLNGVHRKGKDDVSESLSPESHAGAARGPPMLPPGVHGVPMLIPPNDNAHMGMGADGVQVGHAMPMLQQQQQQQQQLMQPHQMAMGQIGGMSQHGHQRHQGQQGPPAAPPGRPRAKMSTPVASTGGIAMQDAQLLHMHDPARFLEQAPPLVPVGAQSARGGGYQQQQQQQQQLQLQQQLHQQFGPYAQQPYIMRGGAMEYTVQAPQQHTNSGSLAMGSGVGMPPSRGGLIRGAATGAPQVQSLPPLNSQLPMPQMALPVPGMGGGMGMGMGGMGGMGLSMPSSIPMYSQQTSLQQQLQSLQQQLQRDGSSQDAQGEHSGGGDLQASQSASGVMTSGLSQMTSLGLPSSFIGAPGVPPSMYGRGARSLASFEHQQGDGFGGYHGGIDLYMNPHQQQQQQHQQQQQQQLHQSIDMGGVRDLRQQQPPPMGGIGHGMHGGY* # PASA_UPDATE: g12321.t1, single gene model update, valid-1, status:[pasa:asmbl_805,status:12], valid-1 NODE_1207_length_13043_cov_39.7659 . gene 257 2432 . + . ID=g12321;Name=g12321.t1 NODE_1207_length_13043_cov_39.7659 . mRNA 257 2432 . + . ID=g12321.t1;Parent=g12321;Name=g12321.t1 NODE_1207_length_13043_cov_39.7659 . exon 257 463 . + . ID=g12321.t1.exon1;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . CDS 257 463 . + 0 ID=cds.g12321.t1;Parent=g12321.t1;5_prime_partial=true NODE_1207_length_13043_cov_39.7659 . exon 739 827 . + . ID=g12321.t1.exon2;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . CDS 739 827 . + 0 ID=cds.g12321.t1;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . exon 1114 1182 . + . ID=g12321.t1.exon3;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . CDS 1114 1182 . + 1 ID=cds.g12321.t1;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . exon 1426 1754 . + . ID=g12321.t1.exon4;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . CDS 1426 1754 . + 1 ID=cds.g12321.t1;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . exon 2162 2432 . + . ID=g12321.t1.exon5;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . CDS 2162 2280 . + 2 ID=cds.g12321.t1;Parent=g12321.t1 NODE_1207_length_13043_cov_39.7659 . three_prime_UTR 2281 2432 . + . ID=g12321.t1.utr3p1;Parent=g12321.t1 #PROT g12321.t1 g12321 ARFYIAEVSLAIGYLHSNDIIFRDLKPENVLLDSRGHVKLTDYGFARRLPRDGNCYSFVGTPEYLAPEVIEGGGHGKPSDWWTLGVFTFELVTGRVPFKSANRSVLYEMILDGQPKYPPRLSPALLDFMKRLMTRSPTKRLGGSIGPSDARGSSSPLSTSQGTGSPHLTPMLTPSGSSGTISRSSAKKLSAVIAPVGQKEIAAHAFMADIDWASMELGHVPPPFLPSVSGEGDTGNFIEYADDVSSKSDTEADISLSSANQSYESLFGDF* # PASA_UPDATE: g12326.t1, single gene model update, valid-1, status:[pasa:asmbl_799,status:12], valid-1 NODE_1207_length_13043_cov_39.7659 . gene 11998 12961 . - . ID=g12326;Name=g12326.t1 NODE_1207_length_13043_cov_39.7659 . mRNA 11998 12961 . - . ID=g12326.t1;Parent=g12326;Name=g12326.t1 NODE_1207_length_13043_cov_39.7659 . five_prime_UTR 12929 12961 . - . ID=g12326.t1.utr5p1;Parent=g12326.t1 NODE_1207_length_13043_cov_39.7659 . exon 11998 12961 . - . ID=g12326.t1.exon1;Parent=g12326.t1 NODE_1207_length_13043_cov_39.7659 . CDS 12446 12928 . - 0 ID=cds.g12326.t1;Parent=g12326.t1 NODE_1207_length_13043_cov_39.7659 . three_prime_UTR 11998 12445 . - . ID=g12326.t1.utr3p1;Parent=g12326.t1 #PROT g12326.t1 g12326 MRKPPRNPNDPIITRTLLIRVLVSASIIVCGTLFVFVHEMHEDGIVDARDNTMAFTTFVFFDMFNALASRSEEKSVFTVGLTSNPMFLYAVGGSVLGQLAVIYIAPLQSVFQTTALSLEDLALITLISSTVFIVDELRKVFVVKKEPSIPNAYPSSVEII* # ORIGINAL: g12322.t1 original gene structure, not modified by PASA NODE_1207_length_13043_cov_39.7659 AUGUSTUS gene 3096 3810 . - . ID=g12322;Name=g12322.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS mRNA 3096 3810 . - . ID=g12322.t1;Parent=g12322;Name=g12322.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS exon 3603 3810 . - . ID=g12322.t1.exon1;Parent=g12322.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS CDS 3603 3810 . - 0 ID=cds.g12322.t1;Parent=g12322.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS exon 3096 3121 . - . ID=g12322.t1.exon2;Parent=g12322.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS CDS 3096 3121 . - 2 ID=cds.g12322.t1;Parent=g12322.t1 #PROT g12322.t1 g12322 MSDLASTKLKDVPSWLTRTFGGGRFKASANTAIMWYERKYIRPGTFRPVVHAILLLGVSGYILRYDHTSHDAHARHH* # ORIGINAL: g12325.t1 original gene structure, not modified by PASA NODE_1207_length_13043_cov_39.7659 AUGUSTUS gene 10926 11469 . + . ID=g12325;Name=g12325.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS mRNA 10926 11469 . + . ID=g12325.t1;Parent=g12325;Name=g12325.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS exon 10926 11250 . + . ID=g12325.t1.exon1;Parent=g12325.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS CDS 10926 11250 . + 0 ID=cds.g12325.t1;Parent=g12325.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS exon 11387 11469 . + . ID=g12325.t1.exon2;Parent=g12325.t1 NODE_1207_length_13043_cov_39.7659 AUGUSTUS CDS 11387 11469 . + 2 ID=cds.g12325.t1;Parent=g12325.t1 #PROT g12325.t1 g12325 MSSPSSSAADAPDAPAPHSTVDASGYQCKKCRLFLVAAADVMPHAKGDGQVSFEYRKRAGGFGTPDVPPCTSLFVPDQPWMAGVTDGAVEGKINCPKCAARLGSFAWSGSQCSCGVWVTPSIQLHLNKIDLIVRR* # ORIGINAL: g5706.t1 original gene structure, not modified by PASA NODE_718_length_18695_cov_37.8924 AUGUSTUS gene 6178 7137 . - . ID=g5706;Name=g5706.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS mRNA 6178 7137 . - . ID=g5706.t1;Parent=g5706;Name=g5706.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 7011 7137 . - . ID=g5706.t1.exon1;Parent=g5706.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 7011 7137 . - 0 ID=cds.g5706.t1;Parent=g5706.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 6178 6686 . - . ID=g5706.t1.exon2;Parent=g5706.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 6178 6686 . - 2 ID=cds.g5706.t1;Parent=g5706.t1 #PROT g5706.t1 g5706 MGTKAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDITQDKTFDNIKNWIRNIEQHAAEDVEKMILGNKCDIEDKRMVTKERGQKLADEYGIKFLETSAKANINVEEAFMTIARDIKKKMDNKATATPGAGGKTTVSVKPAATNQPKKAGGFSCTLL* # PASA_UPDATE: g5709.t1, single gene model update, valid-1, status:[pasa:asmbl_9026,status:12], valid-1 NODE_718_length_18695_cov_37.8924 . gene 16003 18588 . + . ID=g5709;Name=g5709.t1 NODE_718_length_18695_cov_37.8924 . mRNA 16003 18588 . + . ID=g5709.t1;Parent=g5709;Name=g5709.t1 NODE_718_length_18695_cov_37.8924 . five_prime_UTR 16003 16050 . + . ID=g5709.t1.utr5p1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 16003 16195 . + . ID=g5709.t1.exon1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 16051 16195 . + 0 ID=cds.g5709.t1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 16463 16554 . + . ID=g5709.t1.exon2;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 16463 16554 . + 2 ID=cds.g5709.t1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 16697 16822 . + . ID=g5709.t1.exon3;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 16697 16822 . + 0 ID=cds.g5709.t1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 17127 17802 . + . ID=g5709.t1.exon4;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 17127 17802 . + 0 ID=cds.g5709.t1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 18105 18289 . + . ID=g5709.t1.exon5;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 18105 18289 . + 2 ID=cds.g5709.t1;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . exon 18457 18588 . + . ID=g5709.t1.exon6;Parent=g5709.t1 NODE_718_length_18695_cov_37.8924 . CDS 18457 18588 . + 0 ID=cds.g5709.t1;Parent=g5709.t1;3_prime_partial=true #PROT g5709.t1 g5709 MERYNSAQGRLAGQLSAQRVRTAIEHKSKLDIYSEPIFIRKTSIICTIGPKTNTVDMLTKLREAGMNIMRLNFSHGSYEFHGSIIDNLRESERLHPGPPVAIALDTKGPEIRTGLLKDDKEIRLETGQMIRLSTDEAFSKIGDAQVLYVDYKRLPQVVDIGGLVFIDDGLISIKVIEKGDNYVHGTVLNSGMLGSRKGVNLPEVSVDLPALSEKDRLDLKFGIERGVDMIFASFIRKPSDVVEVRRCLGEEGKNIKIIAKIENHEGMRNFPEILKEVDGVMVARGDLGIEIPPEKIFLAQKMLIAQCNIAGKPVICATQMLESMTYNPRPTRAEILDVANAVLDGADCVMLSGETAKGAYPVETVQMMHKICREAESAKFQRAVFNEIKAVVPCPVPVPETIACSAVQAAYDCDAAAIILLTTTGSTARLLAKYHPHCPVIVVTRYAQTARQ # PASA_UPDATE: g5708.t1, single gene model update, valid-1, status:[pasa:asmbl_9027,status:12], valid-1 NODE_718_length_18695_cov_37.8924 . gene 12439 15341 . + . ID=g5708;Name=g5708.t1 NODE_718_length_18695_cov_37.8924 . mRNA 12439 15341 . + . ID=g5708.t1;Parent=g5708;Name=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 12439 12538 . + . ID=g5708.t1.exon1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 12439 12538 . + 0 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 12906 13024 . + . ID=g5708.t1.exon2;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 12906 13024 . + 2 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 13257 13342 . + . ID=g5708.t1.exon3;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 13257 13342 . + 0 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 13511 13660 . + . ID=g5708.t1.exon4;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 13511 13660 . + 1 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 13985 14133 . + . ID=g5708.t1.exon5;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 13985 14133 . + 1 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 14382 14589 . + . ID=g5708.t1.exon6;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 14382 14589 . + 2 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 14857 15023 . + . ID=g5708.t1.exon7;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 14857 15023 . + 1 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . exon 15137 15341 . + . ID=g5708.t1.exon8;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . CDS 15137 15219 . + 2 ID=cds.g5708.t1;Parent=g5708.t1 NODE_718_length_18695_cov_37.8924 . three_prime_UTR 15220 15341 . + . ID=g5708.t1.utr3p1;Parent=g5708.t1 #PROT g5708.t1 g5708 MFNRKERKRASINRSFVGDYIGYQDNPSLRALVGKKERVEFADTVTKYDRRYKLQKRDMLLSDKFIYLIALEKVKQGPEKGKFAHVIKRQLPLEQIASLSLSTQQDDFIVLHVPSEYDNVFETVFKTEFLMMLQEKYQAVTNKQLPVNFSSSITYTVKKSTFDRSGTRTITFAPGNTKMAVIKTGGKGATITIEAGLPKDSKPGSHNFAGSSRGGGASASRGGASRGGASRGGAAPSAGRGAAPSAPTSAPNAAAGRGAPAGRGGAAPSRGGAVAAPSPSSAPRAAKPPPASKPNVPRCKALYDYEASDVDELSFKAGDIIQIVNKDNEGWWQGKIGTGKAGLFPSNYVEMMA* # PASA_UPDATE: g5707.t1, single gene model update, valid-1, status:[pasa:asmbl_9029,status:12], valid-1 NODE_718_length_18695_cov_37.8924 . gene 9136 12183 . - . ID=g5707;Name=g5707.t1 NODE_718_length_18695_cov_37.8924 . mRNA 9136 12183 . - . ID=g5707.t1;Parent=g5707;Name=g5707.t1 NODE_718_length_18695_cov_37.8924 . five_prime_UTR 12149 12183 . - . ID=g5707.t1.utr5p1;Parent=g5707.t1 NODE_718_length_18695_cov_37.8924 . exon 9649 12183 . - . ID=g5707.t1.exon1;Parent=g5707.t1 NODE_718_length_18695_cov_37.8924 . CDS 9649 12148 . - 0 ID=cds.g5707.t1;Parent=g5707.t1 NODE_718_length_18695_cov_37.8924 . exon 9136 9385 . - . ID=g5707.t1.exon2;Parent=g5707.t1 NODE_718_length_18695_cov_37.8924 . CDS 9288 9385 . - 2 ID=cds.g5707.t1;Parent=g5707.t1 NODE_718_length_18695_cov_37.8924 . three_prime_UTR 9136 9287 . - . ID=g5707.t1.utr3p1;Parent=g5707.t1 #PROT g5707.t1 g5707 MTTATISPIATSFSANDLAFVATIPSGLGIARVAFSEGVSEVKLISASIEPSLNWASASNPTSVSSPCMSPDGRYVAYQSDAEDVMDALVNNTARVPLVYLYDSLKNITRLVCTLPGDGVPSTYGCELYHGGLRADGAGIVFSSREDLLGEGLSGDVFNVYMRDLYLDTYIRISTTGTSDEPDGDSYMAVISADGEFIAYATNASNIAGSTGGLSVVVSYSVLQWTTTQHGMQVNAFPRTTADVYDLSISADGSILAYSVSLETSPSYGQKMCLACKRAQNGGSSVYAVYVDNSYNIDCTRPIVSSDGKTFGVVLVDGSSTISALAYDSDSNPATYFGNYEQLAVGSGVRGWVVLTPNQDGIIVSSSDIGDATMWDEYSRGDKAYFSYATSGHLDALSYSYDLCDYDLLTTTTMCTPNAQSVRVVTSSYDRTDSPYYAIGETVDLEFIFYLPPTMTSFTFTARAPLVGNSPTFSSVDCQIYDFGNGISFPEQPTVSLGTVASLATTFSVPGSFLDENYNSADYLASVLVRGVLVDHESLVTDSTVVVTFVTSFGGRSSSLTHSLSILEPTVALKVEEFAPFIGSSTYLRARVHVSEYTVGVPVMPIYDVILRIYNVEDVSLRFIQTDQQSSVVFESGYMEMSVSSLDENGVLYRIAVDPNNGEFGGSLGLRFVLTYSNLQSSGRRSRQALYRETAQLTYSGYGRSLVATATRTVAVHTESNYFIACTLLGKPTDGCFRMASDGSSVVRLHSDVAVIIAIDKEADVLYGISGTSQARIASEDGGMTWTTTTSDVVADAIDDDEAVVARVIGLDAGVGDPLLANTDVYSDMSEFGVTFDYIFYKTGYGQPWTVVARWTQDALEFNES* # ORIGINAL: g5705.t1 original gene structure, not modified by PASA NODE_718_length_18695_cov_37.8924 AUGUSTUS gene 242 3211 . + . ID=g5705;Name=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS mRNA 242 3211 . + . ID=g5705.t1;Parent=g5705;Name=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 242 404 . + . ID=g5705.t1.exon1;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 242 404 . + 1 ID=cds.g5705.t1;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 603 1817 . + . ID=g5705.t1.exon2;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 603 1817 . + 0 ID=cds.g5705.t1;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 2006 2282 . + . ID=g5705.t1.exon3;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 2006 2282 . + 0 ID=cds.g5705.t1;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 2553 2827 . + . ID=g5705.t1.exon4;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 2553 2827 . + 2 ID=cds.g5705.t1;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS exon 3110 3211 . + . ID=g5705.t1.exon5;Parent=g5705.t1 NODE_718_length_18695_cov_37.8924 AUGUSTUS CDS 3110 3211 . + 0 ID=cds.g5705.t1;Parent=g5705.t1 #PROT g5705.t1 g5705 LLVLGLQKFNKPHKNSSHDWEKIRNEFFPTRTTEQVRLRYKNMVASRAPKNPLKDFRDELPWQCIFEHMKTYAPPPDFVSRRGEKKGLKLSVQAQAHNTQQAHNQTQKHTKTQTQQVSRGVHSLVGSTSHTTAATIALNGNGLKTPHGIEWNDRINGSGAVAASVHRSNAAVLDSRRATGPAHTAAVKGMAAMTPPSATQHGGREDARDALEAESRANAADVTCAPANQQRHQCMDVDMDVAVGEHHVTNHGMARDRITLERRPRSSLDILSRAAIEMEYAESSATEEGGDANTMTHVGDDGDQHAGSGALADRAHHVRAGKAEPPLVRERNHGSVVTGIGAAPAQSRTQRPVAQIAPRPAVGGVGAGAGARAVSGRLCATTVRSGTLVSSFLGRAVEASREKRTAGGGGALGQPPRPSRGPPLVSVESGGDVRGAEMLEFSDSDDEDCVSHGSGSIREESIAGRTDGYEHCDIDSNANSDGEGDASDGIESADAVDVGMTSHSIHAPERDEARPLKQDCVGVHASVVPPMSSCEQTTAALHAIDSDGISDTQQQQQQAAHILSVAVVGSAPVSAVQSPASTLPILPARNVIVANAAVIVWSRDEDRAVLLAARSIGPDSANADDVWSRLCASGQVQGKTIEQVSARHAELKRLQEAFKAHKRPPPVAVDETHRQS* # PASA_UPDATE: g6031.t1, single gene model update, valid-1, status:[pasa:asmbl_4749,status:3], valid-1 NODE_2661_length_5524_cov_40.3795 . gene 1952 4623 . - . ID=g6031;Name=g6031.t1 NODE_2661_length_5524_cov_40.3795 . mRNA 1952 4623 . - . ID=g6031.t1;Parent=g6031;Name=g6031.t1 NODE_2661_length_5524_cov_40.3795 . five_prime_UTR 4588 4623 . - . ID=g6031.t1.utr5p1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 4281 4623 . - . ID=g6031.t1.exon1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 4281 4587 . - 0 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 4069 4127 . - . ID=g6031.t1.exon2;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 4069 4127 . - 2 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 3578 3698 . - . ID=g6031.t1.exon3;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 3578 3698 . - 0 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 3197 3357 . - . ID=g6031.t1.exon4;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 3197 3357 . - 2 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 2758 2912 . - . ID=g6031.t1.exon5;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 2758 2912 . - 0 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 2324 2470 . - . ID=g6031.t1.exon6;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 2324 2470 . - 1 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . exon 1952 2123 . - . ID=g6031.t1.exon7;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . CDS 1973 2123 . - 1 ID=cds.g6031.t1;Parent=g6031.t1 NODE_2661_length_5524_cov_40.3795 . three_prime_UTR 1952 1972 . - . ID=g6031.t1.utr3p1;Parent=g6031.t1 #PROT g6031.t1 g6031 MRTLGKMTLLSGVAQCAILPMRAQSPALQRARALFFTPLRQTQHGMRHYASGFPRGEAAGQRRNGNEEDPKSGKIQFSKLFGFAIAGTVVAVATKIYNDFSVAIPGSKTTSKEVRSKLLVTQVELAVDVQSDGLAKALAARLETLYGISAFNLDRENGILLVEATIPAAIIVNVLRSIGVTAVVRGISGATTSLGAAVCELSVGRDGTRGVVRLVQATEDDVIIEGVVDGLEPGKHGIRVCECGDLSNGCRNTGPHYNPGGHPHGAPGYPAALRHAGDLGNVTADSSGRAVFRIEDSGFKLADVIGRSIVISESPDRYHPDADNTEGGVACGIIARASSVSGNTKRICACDGKTLWEEAQAQPPQK* # ORIGINAL: g6030.t1 original gene structure, not modified by PASA NODE_2661_length_5524_cov_40.3795 AUGUSTUS gene 162 1578 . + . ID=g6030;Name=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS mRNA 162 1578 . + . ID=g6030.t1;Parent=g6030;Name=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS exon 162 338 . + . ID=g6030.t1.exon1;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS CDS 162 338 . + 2 ID=cds.g6030.t1;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS exon 547 904 . + . ID=g6030.t1.exon2;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS CDS 547 904 . + 2 ID=cds.g6030.t1;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS exon 1144 1297 . + . ID=g6030.t1.exon3;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS CDS 1144 1297 . + 1 ID=cds.g6030.t1;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS exon 1510 1578 . + . ID=g6030.t1.exon4;Parent=g6030.t1 NODE_2661_length_5524_cov_40.3795 AUGUSTUS CDS 1510 1578 . + 0 ID=cds.g6030.t1;Parent=g6030.t1 #PROT g6030.t1 g6030 QQTLGEEYCDIAQVAPNRHGLWQARLRRATLVALHTAFPYVLERALERLTAAAKAKLREAETAAHAADPHAASPPGSVLSRLRRLALALLPATGDVVAGLHRAHLALFYFTGIYYHVSKRVLSTRYALVRPLRQGETRPNYFILGVFTSVQLTVTLLMWIAAHAGRQEDELAAGVDDRPPEVDDRDGAGEEIASSHKCSLCLGHRHHTTVTPCGHLFCWRCIAEWCTTKAECPLCRQPVSLQKLCRVYNFE* # PASA_UPDATE: g6032.t1, single gene model update, valid-1, status:[pasa:asmbl_4748,status:12], valid-1 NODE_2661_length_5524_cov_40.3795 . gene 5002 5524 . + . ID=g6032;Name=g6032.t1 NODE_2661_length_5524_cov_40.3795 . mRNA 5002 5524 . + . ID=g6032.t1;Parent=g6032;Name=g6032.t1 NODE_2661_length_5524_cov_40.3795 . five_prime_UTR 5002 5063 . + . ID=g6032.t1.utr5p1;Parent=g6032.t1 NODE_2661_length_5524_cov_40.3795 . exon 5002 5093 . + . ID=g6032.t1.exon1;Parent=g6032.t1 NODE_2661_length_5524_cov_40.3795 . CDS 5064 5093 . + 0 ID=cds.g6032.t1;Parent=g6032.t1 NODE_2661_length_5524_cov_40.3795 . exon 5327 5524 . + . ID=g6032.t1.exon2;Parent=g6032.t1 NODE_2661_length_5524_cov_40.3795 . CDS 5327 5524 . + 0 ID=cds.g6032.t1;Parent=g6032.t1;3_prime_partial=true #PROT g6032.t1 g6032 MANLVKSIPETVSTLRATFATGRTRDIAWRKAQLEAFERMINDHKDALIESVQKDLRRPKFEVCVYAVLDAKEGRG # PASA_UPDATE: g3080.t1, single gene model update, valid-1, status:[pasa:asmbl_7396,status:12], valid-1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . gene 887 1424 . + . ID=g3080;Name=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . mRNA 887 1424 . + . ID=g3080.t1;Parent=g3080;Name=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . five_prime_UTR 887 976 . + . ID=g3080.t1.utr5p1;Parent=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . exon 887 1063 . + . ID=g3080.t1.exon1;Parent=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . CDS 977 1063 . + 0 ID=cds.g3080.t1;Parent=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . exon 1254 1424 . + . ID=g3080.t1.exon2;Parent=g3080.t1 NODE_4509_length_1523_cov_39.9641_potentialcontaminant . CDS 1254 1424 . + 0 ID=cds.g3080.t1;Parent=g3080.t1;3_prime_partial=true #PROT g3080.t1 g3080 MENGAADREMTSEGSSHVLSAAEVQFDKEVLSELHFLVAAANPRSRLQHVVLIINTALLIGVVAILLAVAFSAKQNLDKMNDTMTL # ORIGINAL: g4146.t1 original gene structure, not modified by PASA NODE_2697_length_5418_cov_41.783 AUGUSTUS gene 2839 5406 . + . ID=g4146;Name=g4146.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS mRNA 2839 5406 . + . ID=g4146.t1;Parent=g4146;Name=g4146.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS exon 2839 5406 . + . ID=g4146.t1.exon1;Parent=g4146.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS CDS 2839 5406 . + 0 ID=cds.g4146.t1;Parent=g4146.t1 #PROT g4146.t1 g4146 MATSPRKRTRSISRSDLLFSDDGDASSAHDYNITNAHAHQQHREQHFNPNLRKNRGGSTHIETGNTTGGEGVRGHPPKRPRSQSNAGRGDAVSSLSDAARTPTITTMAVSPTADVPSSQPTIPSQRRLVFADEMRTPMSIRRLRGRASSLSESPRKSVADSTSLSAAVQDARRAAASASMGRRKRTSSMSDAYPSKSMRVLGNNQRRSIGRTQVEHAAALLHGQGRAKGMDDGDASFGATLRTSVKGMRTDSAVEEDQVMHPHLHAGDHRPLLFGRRTRTVSKTEDVDVLALAQQQQQQHQQFGEDGGLARRTRAASRSEMFAVDGGARGGALHFYTHTHADGKNVNDLPDDVLRIILEHVCCNPRAFAAVAGVCRRWDALVATTSCIWRKMELFENSKLCGGQFGEPIRVMRAGIKWKFGRPSRTGDWFAANRAFLERASDYGNWEASVLLFIHLWRPHMKNDAPLTSVEKKLASHGFVREEAALRKRAEQAHAAAALAAASAAASARSHLRRANASSHQHPHLQQHNQLTMSPRSRTRGASLSLARPDVLCDQGSLRSTTSELALWLRTAVRNSFECFSQACHSNADIAEALALHAQHNLRRTRGALEMMEAQFAGNVGTTVHAICALLADMNAVAPRFVLLCLHHVTGEYERNMPDMFREQRQDPHNQHNNNNNNNNNNNNGNGLLEGDHLAATHAAYLRLLFNDIASAWKACIDNLLQLSPGPSGGPPTLAEASALAVRLFRLSRFSLFSTLDIDGPSTGESDNDDGVGANGTNGARGSAILPADVELRRRIGVPLPGKTIFRTLAKRLSDPSGEASTAGSSAVGSTCTTPTAPSGDARTGSPRSRQSRGN* # ORIGINAL: g4145.t1 original gene structure, not modified by PASA NODE_2697_length_5418_cov_41.783 AUGUSTUS gene 542 1686 . - . ID=g4145;Name=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS mRNA 542 1686 . - . ID=g4145.t1;Parent=g4145;Name=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS exon 1315 1686 . - . ID=g4145.t1.exon1;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS CDS 1315 1686 . - 0 ID=cds.g4145.t1;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS exon 983 1105 . - . ID=g4145.t1.exon2;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS CDS 983 1105 . - 0 ID=cds.g4145.t1;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS exon 758 834 . - . ID=g4145.t1.exon3;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS CDS 758 834 . - 0 ID=cds.g4145.t1;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS exon 542 623 . - . ID=g4145.t1.exon4;Parent=g4145.t1 NODE_2697_length_5418_cov_41.783 AUGUSTUS CDS 542 623 . - 1 ID=cds.g4145.t1;Parent=g4145.t1 #PROT g4145.t1 g4145 MASPHDHTHGRCDGHTAHAHSHVQATESTNDGNDGNDASLGWNDADGEEARYLRGVLSTMLSYRQNALRRIGRAHDGYLRLDDRHRALVPHYPQRLQRMADAVAANQSFIDAVVADGDIFDNLQPSEATEDSIASQQGTTTRNTESDMDKVRSTLRQCVREWGADGAAEREACCGPILKELEKQYPDVQKRRELHVLVPGAGLGRLAFDIARLGTDA* # ORIGINAL: g12309.t1 original gene structure, not modified by PASA NODE_7122_length_469_cov_88.1142 AUGUSTUS gene 2 469 . + . ID=g12309;Name=g12309.t1 NODE_7122_length_469_cov_88.1142 AUGUSTUS mRNA 2 469 . + . ID=g12309.t1;Parent=g12309;Name=g12309.t1 NODE_7122_length_469_cov_88.1142 AUGUSTUS exon 2 469 . + . ID=g12309.t1.exon1;Parent=g12309.t1 NODE_7122_length_469_cov_88.1142 AUGUSTUS CDS 2 469 . + 0 ID=cds.g12309.t1;Parent=g12309.t1 #PROT g12309.t1 g12309 QGLIVPLHKKGDRTDPDNYRGITLLSCVGKLYNRVLQNRLAGALEDKLADEQGGFRQGRGCEDQLAIVMDVMHRRLNPSTSSRRRPISTPLHMAFLDLRKAYDSVWRDGLWYKLRTLGLPADIIAILQELYSECPNQVLVDGEVTDEFDIRAGLKQ # ORIGINAL: g4656.t1 original gene structure, not modified by PASA NODE_1164_length_13439_cov_39.1513 AUGUSTUS gene 8249 9292 . - . ID=g4656;Name=g4656.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS mRNA 8249 9292 . - . ID=g4656.t1;Parent=g4656;Name=g4656.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 8249 9292 . - . ID=g4656.t1.exon1;Parent=g4656.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 8249 9292 . - 0 ID=cds.g4656.t1;Parent=g4656.t1 #PROT g4656.t1 g4656 MAATMNAVAIRNYGTADKLEAVVVSVPTPSAHDILVKVAAVSVNPVDRKKRQNFGAAFDETTSFDQPLILGWDASGTVTAVGSEVSLFSVGDEVFFAGSLIRPGSNAEYTLVDERIAAKKPKSLSHADAAVIPLVALTAWEALVDGMGIPIPSEHSAPKRTKTILVIAGAGGVGSFAVQFAKRILGLRVIATASRPESRKFCLDNGADDVISHAAPLAEGLKSIGLSGVDYIFCTAGIADYIDQAVEIANPSGKIAAIDDDNLKPFDLSRLKLKRLTFHFELMFTRPIFGYELERQNEILSEVSRLLDAGVLKTTLTKTYAFNADNLRQAHLDIESNRTVGKIALTF* # ORIGINAL: g4655.t1 original gene structure, not modified by PASA NODE_1164_length_13439_cov_39.1513 AUGUSTUS gene 6595 7695 . - . ID=g4655;Name=g4655.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS mRNA 6595 7695 . - . ID=g4655.t1;Parent=g4655;Name=g4655.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 6595 7695 . - . ID=g4655.t1.exon1;Parent=g4655.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 6595 7695 . - 0 ID=cds.g4655.t1;Parent=g4655.t1 #PROT g4655.t1 g4655 MTAKDAASGIKSHSFGDEDALLNAALDRIRNVDVAKLEATLQESCGGACINDIIQAFRRAHLFDGTKALPENAEIPETESPIDFFVSLGKLTASGYVSRYVMLHRGLNWRFTDYIFDPEFCGLMQRGRSGNEQCAATMDRAFCASPVLQAAQERFLIEKKILQSLVDRPDVTLASLPCGRMRDLLQLDYSHVNNRAHVFGIDLDEASLTGAADFARELGVDEQFSVLSGGSLSFIHGDALRDGFSISDRQHKFVGTLDVLHSAGLVMYLTDAECLSFFQNARASLKEGGSFVVSQTMLKSEWRGDLVPPEEILVERLVVSVVLQPMWTSGARTVAGTTSLLEKAGFTDIIVHKDSRSIFPTWVARK* # PASA_UPDATE: g4657.t1, single gene model update, valid-1, status:[pasa:asmbl_614,status:12], valid-1 NODE_1164_length_13439_cov_39.1513 . gene 9721 11348 . - . ID=g4657;Name=g4657.t1 NODE_1164_length_13439_cov_39.1513 . mRNA 9721 11348 . - . ID=g4657.t1;Parent=g4657;Name=g4657.t1 NODE_1164_length_13439_cov_39.1513 . five_prime_UTR 11334 11348 . - . ID=g4657.t1.utr5p1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . exon 11289 11348 . - . ID=g4657.t1.exon1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . CDS 11289 11333 . - 0 ID=cds.g4657.t1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . exon 11042 11122 . - . ID=g4657.t1.exon2;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . CDS 11042 11122 . - 0 ID=cds.g4657.t1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . exon 10799 10886 . - . ID=g4657.t1.exon3;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . CDS 10799 10886 . - 0 ID=cds.g4657.t1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . exon 10485 10552 . - . ID=g4657.t1.exon4;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . CDS 10485 10552 . - 2 ID=cds.g4657.t1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . exon 9721 10171 . - . ID=g4657.t1.exon5;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . CDS 10040 10171 . - 0 ID=cds.g4657.t1;Parent=g4657.t1 NODE_1164_length_13439_cov_39.1513 . three_prime_UTR 9721 10039 . - . ID=g4657.t1.utr3p1;Parent=g4657.t1 #PROT g4657.t1 g4657 MPPKRGRKTPSAAAKDAESVEAGDASTPVQSRQLPFKNHAASFLGKNIRWKNLKQIVAAIRSTTYSPDAVTYVGIDAPPSLKPQKRYCDLTGLQAPYTDPQTRLHYHCAKEFLRIRTLQNDVISELLAARNAQPTQQ* # ORIGINAL: g4658.t1 original gene structure, not modified by PASA NODE_1164_length_13439_cov_39.1513 AUGUSTUS gene 11544 13439 . + . ID=g4658;Name=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS mRNA 11544 13439 . + . ID=g4658.t1;Parent=g4658;Name=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 11544 11564 . + . ID=g4658.t1.exon1;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 11544 11564 . + 0 ID=cds.g4658.t1;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 11860 12007 . + . ID=g4658.t1.exon2;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 11860 12007 . + 0 ID=cds.g4658.t1;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 12248 12387 . + . ID=g4658.t1.exon3;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 12248 12387 . + 2 ID=cds.g4658.t1;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 12776 12867 . + . ID=g4658.t1.exon4;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 12776 12867 . + 0 ID=cds.g4658.t1;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 13057 13439 . + . ID=g4658.t1.exon5;Parent=g4658.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 13057 13439 . + 1 ID=cds.g4658.t1;Parent=g4658.t1 #PROT g4658.t1 g4658 MSTVTLKSIPLSAIAGRPVLLKFDNAQPTGSFKIRGIGVLCQRAAARGCTEIISSSGGNAGYAAAYAGRMLGMKVTVVVPMTTPEFMRRRIESEGANVIIHGSVWDEANTFALEKCAANQNIAYVSPFDHPDIWTGHASVIAEIRSDVDSLGAATPAAIVVSVGGGGLYCGVVEGLRAVGWDKVPVIAVETEGAASLRACADAGAWVEIAEIRSVAKSLGAKRVAKRAYELLVEHPTVCVAVTDKQALRACVDLAGGGGGG # PASA_UPDATE: g4654.t1, single gene model update, valid-1, status:[pasa:asmbl_615,status:12], valid-1 NODE_1164_length_13439_cov_39.1513 . gene 2783 6340 . + . ID=g4654;Name=g4654.t1 NODE_1164_length_13439_cov_39.1513 . mRNA 2783 6340 . + . ID=g4654.t1;Parent=g4654;Name=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 2783 3087 . + . ID=g4654.t1.exon1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 2783 3087 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 3249 3383 . + . ID=g4654.t1.exon2;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 3249 3383 . + 1 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 3510 3659 . + . ID=g4654.t1.exon3;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 3510 3659 . + 1 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 3861 3996 . + . ID=g4654.t1.exon4;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 3861 3996 . + 1 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 4366 4524 . + . ID=g4654.t1.exon5;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 4366 4524 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 4739 4837 . + . ID=g4654.t1.exon6;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 4739 4837 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 5073 5135 . + . ID=g4654.t1.exon7;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 5073 5135 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 5384 5569 . + . ID=g4654.t1.exon8;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 5384 5569 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 5823 6023 . + . ID=g4654.t1.exon9;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . CDS 5823 6008 . + 0 ID=cds.g4654.t1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . exon 6176 6340 . + . ID=g4654.t1.exon10;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . three_prime_UTR 6009 6023 . + . ID=g4654.t1.utr3p1;Parent=g4654.t1 NODE_1164_length_13439_cov_39.1513 . three_prime_UTR 6176 6340 . + . ID=g4654.t1.utr3p2;Parent=g4654.t1 #PROT g4654.t1 g4654 MGGPVALRVFVVLALAVAVWASSAASAVRRPAAASVPRNGGVCDVTHWGAVGDGATYDTRAIQAAIDACAAAGGGVVVLPAGRSFLTATVHLRSGIELRVEEGAVILGGDRREDYPEERDRWYVIIAEDVVDVAITGGGTIDGQALNYVLSRNPSKYVMREWTGPDCSGECRPRLVGFIRSKRIEVRNITLNQPAYWCLHFVASTDISVDGVAIFGDFLIPNNDGIDIDSSSRVRITNTDINTGDDGICPKTSVAPTEDILVERCRIRSKSSAIKLGSGSIFNFTRLRFVDIDIRESHRGLGMQLRDNGSAHDIVFENIRVETRLYDETWWGRGEPIYLSVFPRNNETEVGTISDVIFRNISCKSENGAFISGGLNSTTPRVMRVVLDGVHVTVSHGSEYAVCQHDYRPSDYAGLVSHSTSALYMESAEDVALVDSSFSLLQARRESCFGAAFESAPGTVRRVAIDRTVFDD* # ORIGINAL: g4653.t1 original gene structure, not modified by PASA NODE_1164_length_13439_cov_39.1513 AUGUSTUS gene 249 2063 . - . ID=g4653;Name=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS mRNA 249 2063 . - . ID=g4653.t1;Parent=g4653;Name=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 870 2063 . - . ID=g4653.t1.exon1;Parent=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 870 2063 . - 0 ID=cds.g4653.t1;Parent=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 651 716 . - . ID=g4653.t1.exon2;Parent=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 651 716 . - 0 ID=cds.g4653.t1;Parent=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS exon 249 336 . - . ID=g4653.t1.exon3;Parent=g4653.t1 NODE_1164_length_13439_cov_39.1513 AUGUSTUS CDS 249 336 . - 0 ID=cds.g4653.t1;Parent=g4653.t1 #PROT g4653.t1 g4653 MSYSSGIDALKFLRGAPGNSVCADCGRADPEWASVNLGVVLCAPCATVHRDIGNHVSRVRSVVENDWSLPLLKMMGHIGNSSANGYVWEAALKHAVESDPSYAKPSVDADARALRDFIIAKYIDRVFLVCGEDIDDETVGPALYESVRSEDVVQTLHLLALGANPNFRHSDVGEAGRTVLHVAAANGSFLQAALLVANGANISAIDDYGHTPEQSARFSSHDDLANWLQECSYEVTDCLSKHLSNYMILGGPFSDAPATPHVQHRKASAPEPALAPERMMARQRLGLLSENQFKELSSDVYDEVNRREAENAVKKSGKGEASHHVIKNMVVPFLPVNPNFPPQRNQSRQKLATLTTTQFVDLVADVLYETERRGEEFGRTAEAIKSKVGYRVDGSTGESPRLGEKAAKAAAILRMERDDLTGEASANEVIDSLAKELASVKLRAIEAEA # ORIGINAL: g9075.t1 original gene structure, not modified by PASA NODE_2401_length_6416_cov_42.5423 AUGUSTUS gene 106 5698 . - . ID=g9075;Name=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS mRNA 106 5698 . - . ID=g9075.t1;Parent=g9075;Name=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 5516 5698 . - . ID=g9075.t1.exon1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 5516 5698 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 5122 5229 . - . ID=g9075.t1.exon2;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 5122 5229 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 4660 4790 . - . ID=g9075.t1.exon3;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 4660 4790 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 4190 4267 . - . ID=g9075.t1.exon4;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 4190 4267 . - 1 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 3860 3917 . - . ID=g9075.t1.exon5;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 3860 3917 . - 1 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 3357 3447 . - . ID=g9075.t1.exon6;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 3357 3447 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 2959 3125 . - . ID=g9075.t1.exon7;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 2959 3125 . - 2 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 2701 2820 . - . ID=g9075.t1.exon8;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 2701 2820 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 2246 2359 . - . ID=g9075.t1.exon9;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 2246 2359 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 1747 1868 . - . ID=g9075.t1.exon10;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 1747 1868 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 1112 1356 . - . ID=g9075.t1.exon11;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 1112 1356 . - 1 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 502 833 . - . ID=g9075.t1.exon12;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 502 833 . - 2 ID=cds.g9075.t1;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS exon 106 348 . - . ID=g9075.t1.exon13;Parent=g9075.t1 NODE_2401_length_6416_cov_42.5423 AUGUSTUS CDS 106 348 . - 0 ID=cds.g9075.t1;Parent=g9075.t1 #PROT g9075.t1 g9075 MGGSGSKEDKRNKALEKKKRAISHSTQSVETAHHAAMERASVVAPMPQDPAEVDKLFAQLLDDLNLTSEKRDQMLGFDRERKWTIYNMHAGAAATHAVGADTNAELPPEAIIEKYKAATSNEARASVVNALTIALRTRPIRWVIKFCDIKGLEFLLDTLKFLDDAERDGPMHTNLVKGIKALMNNSYGLRQMLKHPNGLTIVARSLRARNVKTKTLVLEILGASCLVPDGHQQVLAAMDAFAVFHMERTRFMTIMDDLCKRTGDVDVDTSLQVAAMAFVNAVICSGPGKENVEFRQHMRYEFHMLNIDKSIDNLRSQNNANLNRHLDVFENFAEKDHEALAEEYDVHGVDLKNPVAVFGLLEHALANTPAYPHLTSLFNHMMLIPNDATARPKYYQLIDRVAQQIVIQTEDKLDPDGRSFDLDVHAAIGNLVTQDKLDAMAKDRDAFKLKLEQKEKELAEMTMNRDNMKRKVEDGDGCAPEQPEGGQGPPGMDAPPPPPPPGMGGAPPPPPPPGMGGPPGPPPPPGMGGPPPPPGPGMAMPAKKKLPERKRPVAKTALKSFNWSKLPESKIDSTLWMELDDTKILGKLDFNEFEEMFSAYQKPQKDDDDAAVAAAAAAAAKPKELSVVDGRRSQNCSILLSKLKVENETIRKAVLTVNDDVLTK # ORIGINAL: g5482.t1 original gene structure, not modified by PASA NODE_4041_length_2293_cov_46.0938 AUGUSTUS gene 462 1271 . + . ID=g5482;Name=g5482.t1 NODE_4041_length_2293_cov_46.0938 AUGUSTUS mRNA 462 1271 . + . ID=g5482.t1;Parent=g5482;Name=g5482.t1 NODE_4041_length_2293_cov_46.0938 AUGUSTUS exon 462 1271 . + . ID=g5482.t1.exon1;Parent=g5482.t1 NODE_4041_length_2293_cov_46.0938 AUGUSTUS CDS 462 1271 . + 0 ID=cds.g5482.t1;Parent=g5482.t1 #PROT g5482.t1 g5482 MNMDGPTQDYAGAATLPSTVKLDGIVWEVYDAERHWARVPSGKTITGQIAHVDGVECIVVYQAYSLGIAKAAASAIPPRLAASSAYSLSRMSWIKPNFLWMMYRCGWTVEKDNNQRAVLAFFLRKDAFVGDILRRAIPGKCPDTKEQRDMFYDRNEPLLAIYESPEVFAEALKSQSKTVQLQWDPHHDERGQKVERCRAVQLGLRGDILELFAQSDPSLVMGVVDISECVREQYARMSRGEPFLVPREEVISVEDSVVARRIQLNVGPN* # PASA_UPDATE: g5483.t1, single gene model update, valid-1, status:[pasa:asmbl_6896,status:12], valid-1 NODE_4041_length_2293_cov_46.0938 . gene 1440 2081 . - . ID=g5483;Name=g5483.t1 NODE_4041_length_2293_cov_46.0938 . mRNA 1440 2081 . - . ID=g5483.t1;Parent=g5483;Name=g5483.t1 NODE_4041_length_2293_cov_46.0938 . exon 1887 2081 . - . ID=g5483.t1.exon1;Parent=g5483.t1 NODE_4041_length_2293_cov_46.0938 . CDS 1887 2081 . - 0 ID=cds.g5483.t1;Parent=g5483.t1 NODE_4041_length_2293_cov_46.0938 . exon 1440 1577 . - . ID=g5483.t1.exon2;Parent=g5483.t1 NODE_4041_length_2293_cov_46.0938 . CDS 1521 1577 . - 0 ID=cds.g5483.t1;Parent=g5483.t1 NODE_4041_length_2293_cov_46.0938 . three_prime_UTR 1440 1520 . - . ID=g5483.t1.utr3p1;Parent=g5483.t1 #PROT g5483.t1 g5483 MLGSFDLCRYQELTDGGVPRFPAYVGERVDVNWGPVVAGPSAGSASAAAAVDASQSSGTECSDDQTSPKAPAKKRARTAKPTK* # ORIGINAL: g13538.t1 original gene structure, not modified by PASA NODE_3738_length_2861_cov_41.6156 AUGUSTUS gene 206 1786 . - . ID=g13538;Name=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS mRNA 206 1786 . - . ID=g13538.t1;Parent=g13538;Name=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 1409 1786 . - . ID=g13538.t1.exon1;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 1409 1786 . - 0 ID=cds.g13538.t1;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 1212 1249 . - . ID=g13538.t1.exon2;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 1212 1249 . - 0 ID=cds.g13538.t1;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 906 1091 . - . ID=g13538.t1.exon3;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 906 1091 . - 1 ID=cds.g13538.t1;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 498 698 . - . ID=g13538.t1.exon4;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 498 698 . - 1 ID=cds.g13538.t1;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 206 263 . - . ID=g13538.t1.exon5;Parent=g13538.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 206 263 . - 1 ID=cds.g13538.t1;Parent=g13538.t1 #PROT g13538.t1 g13538 MDRFAFLEAQPWIVRMEDVVAFDDASLADALVQSTADKSLRYAMARTRGDDVSANPNDDAGDNVMSASQPQMGFAERAQTLFAGRACFTMPADRASSFSSSSLETTLPKVLFFGRGESASQDPAELALELVEAVLVDGEVVLFARFDGRWYCLDLSAIIDGCVQQVTRPHTQGPIAYCQLQFATVAMRLYGHAGGPELLVRTCENIHRLCALSQTRPPLGHRRRHTTHTAHTTLAMRQASDVDARGAATDRLVEIAAGIAAALYPFGSMTLSNEHHLAQLTRPLNDA # ORIGINAL: g13539.t1 original gene structure, not modified by PASA NODE_3738_length_2861_cov_41.6156 AUGUSTUS gene 2174 2735 . + . ID=g13539;Name=g13539.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS mRNA 2174 2735 . + . ID=g13539.t1;Parent=g13539;Name=g13539.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 2174 2332 . + . ID=g13539.t1.exon1;Parent=g13539.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 2174 2332 . + 0 ID=cds.g13539.t1;Parent=g13539.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS exon 2437 2735 . + . ID=g13539.t1.exon2;Parent=g13539.t1 NODE_3738_length_2861_cov_41.6156 AUGUSTUS CDS 2437 2735 . + 0 ID=cds.g13539.t1;Parent=g13539.t1 #PROT g13539.t1 g13539 MADTTGTAGDATTCTAQAAVQPLRVLEFYSGIGGMVGFMGKVVLIACYESPAMHCALRLSGVSATVVAAFDINTTANAIYTHNFDTQRRLLRQRNIEALSARDYDGMRGDVWLMSPPCQPFTRVGMKRDNEDPRTKSFLHLLAILPKMEHPP # ORIGINAL: g7641.t1 original gene structure, not modified by PASA NODE_5269_length_924_cov_60.8479 AUGUSTUS gene 1 561 . - . ID=g7641;Name=g7641.t1 NODE_5269_length_924_cov_60.8479 AUGUSTUS mRNA 1 561 . - . ID=g7641.t1;Parent=g7641;Name=g7641.t1 NODE_5269_length_924_cov_60.8479 AUGUSTUS exon 1 561 . - . ID=g7641.t1.exon1;Parent=g7641.t1 NODE_5269_length_924_cov_60.8479 AUGUSTUS CDS 1 561 . - 0 ID=cds.g7641.t1;Parent=g7641.t1 #PROT g7641.t1 g7641 MANERTTTECGASPPHVRFRVDNVAIGGARRFLAGIAILVTLLIVAVRGVPSESSFPKCLSFTGAEVGWFMLFKLDRGVDYFYIDDSMSIVVPLSTLGLVDGPRSAASPLARTVQSIVDTGDTADFIVFSDEYSTNRPQGSFLDSRKIPVGIRDELLGPLRTHGILAYNGIIGRGLYMLHSDPYFPP # ORIGINAL: g11710.t1 original gene structure, not modified by PASA NODE_2209_length_7254_cov_41.5738 AUGUSTUS gene 4903 7155 . + . ID=g11710;Name=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS mRNA 4903 7155 . + . ID=g11710.t1;Parent=g11710;Name=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS exon 4903 5717 . + . ID=g11710.t1.exon1;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS CDS 4903 5717 . + 0 ID=cds.g11710.t1;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS exon 5864 6557 . + . ID=g11710.t1.exon2;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS CDS 5864 6557 . + 1 ID=cds.g11710.t1;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS exon 6921 7050 . + . ID=g11710.t1.exon3;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS CDS 6921 7050 . + 0 ID=cds.g11710.t1;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS exon 7142 7155 . + . ID=g11710.t1.exon4;Parent=g11710.t1 NODE_2209_length_7254_cov_41.5738 AUGUSTUS CDS 7142 7155 . + 2 ID=cds.g11710.t1;Parent=g11710.t1 #PROT g11710.t1 g11710 MDGIKKPLKQRNFRRKTGDENEVDGDGDRSEGISSGVATPTDATHQSVQSATTAPANAKAASSAVNSRVNTPTLTKGPRAVAPKGRSLLSFGADDDEEGDADASAAPLPRAAIKKALSQGGRRTLSSAADAVPEQRASQVGSTQVAAPGEYSAERLAELRRNTAGTYYSIPSQSGSDAQSRGDLKADVGEKKAKKDVSAAALAASLLEDITIGNRRKKELDGDVSDEDAAEARRAASAIPDAAAIHAAKKKREMARQLNEMEYIPLDGRQGSTEKGADASRIVREDDNDRSDEDDNLLTGGDAPSSRVEFSAVKPSYDRTKAAVAMEKAIRGDAMDHDGSVNDEHADSDDEVARWEHEQIRKGNSRAKLSGGVASAGHHGTQAQDGDARFQGAYAAAVGKSALTQPQSLLTAQSGGGHQRFAMDGGASAAELIRARVRSTLTRLNETHSTATAQIEKVNNALVDARDGAKRLEGQVAEASERYEFFQGMKAYVADVLACLDDKVPVIEQLESEVRGIFSAEVDAVVKRRQQWRADYLLELVSGVQSASFG* # PASA_UPDATE: g11708.t1, single gene model update, valid-1, status:[pasa:asmbl_3765,status:12],[pasa:asmbl_3767,status:12], valid-1 NODE_2209_length_7254_cov_41.5738 . gene 217 1214 . + . ID=g11708;Name=g11708.t1 NODE_2209_length_7254_cov_41.5738 . mRNA 217 1214 . + . ID=g11708.t1;Parent=g11708;Name=g11708.t1 NODE_2209_length_7254_cov_41.5738 . exon 217 363 . + . ID=g11708.t1.exon1;Parent=g11708.t1 NODE_2209_length_7254_cov_41.5738 . CDS 217 363 . + 0 ID=cds.g11708.t1;Parent=g11708.t1;5_prime_partial=true NODE_2209_length_7254_cov_41.5738 . exon 576 1214 . + . ID=g11708.t1.exon2;Parent=g11708.t1 NODE_2209_length_7254_cov_41.5738 . CDS 576 881 . + 0 ID=cds.g11708.t1;Parent=g11708.t1 NODE_2209_length_7254_cov_41.5738 . three_prime_UTR 882 1214 . + . ID=g11708.t1.utr3p1;Parent=g11708.t1 #PROT g11708.t1 g11708 ACAILTLKSLTFIITIPIRHFLFERRIVEERCVNPVCGFLRHTDLKIVVLALKTVEMLLKRGAEEAMRRGMQRENEYARLVEECGGREALETVLQSSQNMEISRLSVKIVSQYYSDATMIDEDASVLPRAAGAAYSFGVSAALPQAGFQF* # PASA_UPDATE: g11709.t1, single gene model update, valid-1, status:[pasa:asmbl_3764,status:3], valid-1 NODE_2209_length_7254_cov_41.5738 . gene 1553 4351 . - . ID=g11709;Name=g11709.t1 NODE_2209_length_7254_cov_41.5738 . mRNA 1553 4351 . - . ID=g11709.t1;Parent=g11709;Name=g11709.t1 NODE_2209_length_7254_cov_41.5738 . five_prime_UTR 3980 4351 . - . ID=g11709.t1.utr5p1;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . exon 2770 4351 . - . ID=g11709.t1.exon1;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . CDS 2770 3979 . - 0 ID=cds.g11709.t1;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . exon 2316 2493 . - . ID=g11709.t1.exon2;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . CDS 2316 2493 . - 2 ID=cds.g11709.t1;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . exon 1553 2064 . - . ID=g11709.t1.exon3;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . CDS 1701 2064 . - 1 ID=cds.g11709.t1;Parent=g11709.t1 NODE_2209_length_7254_cov_41.5738 . three_prime_UTR 1553 1700 . - . ID=g11709.t1.utr3p1;Parent=g11709.t1 #PROT g11709.t1 g11709 MGASLSRRLCCATSDPDGFSQLTDEQLVRQTFDHLWELLTIDRDAEVPLIGELADRAEDESAWFRLVKEILRTSCAHPLSPTLTCLLLDIFALPPPALTEKLSDFVFSSVGEPWKGKGWLSAPSGGAAGDSSSAGSSRDDTRAIQAASMLKNALTVWGVLAEKLVGGGSEKLLSPRVMQMLLWCVRDQPRLPLVLQGLVTIEKFSQTGSNKQRLIDAGVMDALTSLASRMPAHTLALSVASPTPLAQASTATQAAHNVASADLKIMSEIAFCARWLLETMFSRGDGSRLIMPLDPGVNVILSHRDTTDLLKLSPDGLAARNDAITFESVRSTMGVSRGQWYFEVEVVTLGIMQIGWATKLCKMESEEGAGIGDDEESFGYDGCRQVIWHKGRTVRHTHARWAPGDIVGCYIDIENGRILFWLNGCENPVGFANTRLPRGEFYAAASLMSFQQCSFNFGATPFRFPPPVPFSNFNSHGSLSDADTVIAAKAGHLRPVDMADDDHNGPRCDICFDAFPDTILFPCGHGNMCGSCAVQCETCPICRARIRERKQIGIDRRVSVTSASHPAHTHAEASSSSASVPPE* # PASA_UPDATE: g11680.t1, single gene model update, valid-1, status:[pasa:asmbl_4492,status:12], valid-1 NODE_2521_length_6012_cov_37.1636 . gene 128 3069 . - . ID=g11680;Name=g11680.t1 NODE_2521_length_6012_cov_37.1636 . mRNA 128 3069 . - . ID=g11680.t1;Parent=g11680;Name=g11680.t1 NODE_2521_length_6012_cov_37.1636 . five_prime_UTR 3018 3069 . - . ID=g11680.t1.utr5p1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 2760 3069 . - . ID=g11680.t1.exon1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 2760 3017 . - 0 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 2434 2528 . - . ID=g11680.t1.exon2;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 2434 2528 . - 0 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 2048 2128 . - . ID=g11680.t1.exon3;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 2048 2128 . - 1 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 1535 1738 . - . ID=g11680.t1.exon4;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 1535 1738 . - 1 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 1065 1209 . - . ID=g11680.t1.exon5;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 1065 1209 . - 1 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 552 655 . - . ID=g11680.t1.exon6;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 552 655 . - 0 ID=cds.g11680.t1;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . exon 128 272 . - . ID=g11680.t1.exon7;Parent=g11680.t1 NODE_2521_length_6012_cov_37.1636 . CDS 128 272 . - 1 ID=cds.g11680.t1;Parent=g11680.t1;3_prime_partial=true #PROT g11680.t1 g11680 MAVTQQPRRQGRTAQRQSHTPNESGRSADLKSGANGAYVVVGAVAVVLCAFVGFRLYGHAGHAVNEAGNGPMPTTTVVQRGLVVEKVTYASVLEEHARPSSIKTKHFPNDVLAYVTPWNGRGYDIAKGFGAKFTLVSPVWFLLRPSPSHLFEIVGGHDVDQGWLNDVRAASDPPPSIVPRFSFDGWSGDALSRAVGDAKAVAALSAGIVAECRRHGVDGLVLDIASVGLTKYPQPWRAFVKTLSRELKAGNPNAKLIVSAMPIRHPSINFDREDMASLANDVDFVSLMTYDYAGGSAGPTAPLSWVIRTVDGLVSLAESNSTLSRKILLGLNLYGYDYGNRGGE # PASA_UPDATE: g11681.t1, single gene model update, valid-1, status:[pasa:asmbl_4493,status:12], valid-1 NODE_2521_length_6012_cov_37.1636 . gene 3317 5645 . - . ID=g11681;Name=g11681.t1 NODE_2521_length_6012_cov_37.1636 . mRNA 3317 5645 . - . ID=g11681.t1;Parent=g11681;Name=g11681.t1 NODE_2521_length_6012_cov_37.1636 . five_prime_UTR 5588 5645 . - . ID=g11681.t1.utr5p1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 5384 5645 . - . ID=g11681.t1.exon1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 5384 5587 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 5132 5266 . - . ID=g11681.t1.exon2;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 5132 5266 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 4720 4838 . - . ID=g11681.t1.exon3;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 4720 4838 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 4425 4497 . - . ID=g11681.t1.exon4;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 4425 4497 . - 1 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 4066 4284 . - . ID=g11681.t1.exon5;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 4066 4284 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 3893 3922 . - . ID=g11681.t1.exon6;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 3893 3922 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . exon 3317 3663 . - . ID=g11681.t1.exon7;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . CDS 3487 3663 . - 0 ID=cds.g11681.t1;Parent=g11681.t1 NODE_2521_length_6012_cov_37.1636 . three_prime_UTR 3317 3486 . - . ID=g11681.t1.utr3p1;Parent=g11681.t1 #PROT g11681.t1 g11681 MVLPSGATKWVGVVLAVLVASCPHIAHAADEASSYVASVVQHPAIVVDAFGKTLDAVSMISANMAAYELHAHAAREAAVDVIVYPEFGLGPDAFTRDLVLEMGVRIPAVDPLTPLNPCLNASSPALLRNASCLAITANAVAVVNVYEIEDCDSDDADCPADGRYQWNAVVVFASDGTLIAKYHKSHIWFRSAFDQPKIPGLVSFDAIVGRRTLSPSTVTFGVFMCYDIVFPHPSTDLVAMGIRHFVYPASMNSLHGIGYEAQRLWSWVHKSTLVASDEGAKYAAVFSKGVDITSSTVKIGNDAFLPDDVLKIATVFVQ* # ORIGINAL: g2976.t1 original gene structure, not modified by PASA NODE_17938_length_205_cov_30.6462_potentialcontaminant AUGUSTUS gene 2 205 . + . ID=g2976;Name=g2976.t1 NODE_17938_length_205_cov_30.6462_potentialcontaminant AUGUSTUS mRNA 2 205 . + . ID=g2976.t1;Parent=g2976;Name=g2976.t1 NODE_17938_length_205_cov_30.6462_potentialcontaminant AUGUSTUS exon 2 205 . + . ID=g2976.t1.exon1;Parent=g2976.t1 NODE_17938_length_205_cov_30.6462_potentialcontaminant AUGUSTUS CDS 2 205 . + 0 ID=cds.g2976.t1;Parent=g2976.t1 #PROT g2976.t1 g2976 KEKERDKDKEDKKDDRKDRDDKKEKEREKDKDKEDKKEKERDRDKDGKDHKEKSERKRVCISCARRLP # PASA_UPDATE: g453.t1, single gene model update, valid-1, status:[pasa:asmbl_5325,status:12], valid-1 NODE_2972_length_4625_cov_40.7505 . gene 2842 4444 . - . ID=g453;Name=g453.t1 NODE_2972_length_4625_cov_40.7505 . mRNA 2842 4444 . - . ID=g453.t1;Parent=g453;Name=g453.t1 NODE_2972_length_4625_cov_40.7505 . five_prime_UTR 4444 4444 . - . ID=g453.t1.utr5p1;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . exon 4231 4444 . - . ID=g453.t1.exon1;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . CDS 4231 4443 . - 0 ID=cds.g453.t1;Parent=g453.t1;5_prime_partial=true NODE_2972_length_4625_cov_40.7505 . exon 3321 3959 . - . ID=g453.t1.exon2;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . CDS 3321 3959 . - 0 ID=cds.g453.t1;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . exon 2842 3146 . - . ID=g453.t1.exon3;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . CDS 3009 3146 . - 0 ID=cds.g453.t1;Parent=g453.t1 NODE_2972_length_4625_cov_40.7505 . three_prime_UTR 2842 3008 . - . ID=g453.t1.utr3p1;Parent=g453.t1 #PROT g453.t1 g453 GGKVLVSVQEHINRLIAIRLQCDIMGSETYIVARTDSEAATLINNNVDPRDHPFILGSTNKSLRPLNEIVAAAQAQHKSESEINAIQERWSKEAKIQTYRKTVADALRQANASADVIAKWNNQSLTLSNVDARKLAKSLGVDPFWCWESPRTVEGYYRVDGGTLYAIYRSRAYAPYTDMIWMETKKPEIAQAKEFAEGVLAAHPHRFLAYNLSPSFNWDATGMTDEQIRTFVWDLGRMGYVWQFITLAGFHANSLAIDTFARDYAKRGMLAYVEDIQRQERKHEVETLEHQTWSGALLVDAQLNTVTGGLVSTAAMGEGVTEKQFKGAH* # ORIGINAL: g452.t1 original gene structure, not modified by PASA NODE_2972_length_4625_cov_40.7505 AUGUSTUS gene 816 2321 . + . ID=g452;Name=g452.t1 NODE_2972_length_4625_cov_40.7505 AUGUSTUS mRNA 816 2321 . + . ID=g452.t1;Parent=g452;Name=g452.t1 NODE_2972_length_4625_cov_40.7505 AUGUSTUS exon 816 2321 . + . ID=g452.t1.exon1;Parent=g452.t1 NODE_2972_length_4625_cov_40.7505 AUGUSTUS CDS 816 2321 . + 0 ID=cds.g452.t1;Parent=g452.t1 #PROT g452.t1 g452 MLKLASICLGTLDYLYYLIRTLNPRRALFFDAGWGDRLDKVSVFSKELEERIASGERAIAADPLGDANVKWADFPVQDSSSKKEWILLSLLRSLLAVFFAFPSGVDAKASRSGTDRPVHHDDIITRELSFDSPLSHLLPEECRRTAILVVFSASTRAPFHTQSDVKEKSLSNPSSVVVLLPATGEQWFGPRLQLAKKLISTRLRSNDSGVCGQSQQTAGNAPLILIPCAPFYGRRAPRGQRMHYITRVDNFLAQSMAICSETALVLEWMHSLYPRAPLAVSGFSWGGAMASVSSILAAAMVDVSRARDGCAHTPPPRIAVVPYAGSATPAVLVDGVLRSDINWPALVRCRLGPMFGSDVDSARDAIDGRRTEAEVSRTLLEYFLQTNLSKALAAYNRRISAGKIAPPQLAVRCVSFTHDHFLPPAYSNGLYSLLERAVVDWNAALSSLALAEKRGDVVSLGSATMSWHYGGHLVAFVRRLKLQVDPICAALHQFETQHHQL* # PASA_UPDATE: g11150.t1, single gene model update, valid-1, status:[pasa:asmbl_10230,status:12], valid-1 NODE_986_length_15057_cov_39.8949 . gene 13685 14734 . + . ID=g11150;Name=g11150.t1 NODE_986_length_15057_cov_39.8949 . mRNA 13685 14734 . + . ID=g11150.t1;Parent=g11150;Name=g11150.t1 NODE_986_length_15057_cov_39.8949 . five_prime_UTR 13685 13993 . + . ID=g11150.t1.utr5p1;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . exon 13685 14006 . + . ID=g11150.t1.exon1;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . CDS 13994 14006 . + 0 ID=cds.g11150.t1;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . exon 14347 14420 . + . ID=g11150.t1.exon2;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . CDS 14347 14420 . + 2 ID=cds.g11150.t1;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . exon 14585 14734 . + . ID=g11150.t1.exon3;Parent=g11150.t1 NODE_986_length_15057_cov_39.8949 . CDS 14585 14734 . + 0 ID=cds.g11150.t1;Parent=g11150.t1;3_prime_partial=true #PROT g11150.t1 g11150 MADPVSAVGGSRRVIKEGFVLVKSKNVMKPGWISYRFVVEPGIIKYNRAHEADRVSALAFDVRSQVKEHDVGRANSWEM # PASA_UPDATE: g11149.t1, single gene model update, valid-1, status:[pasa:asmbl_10229,status:3], valid-1 NODE_986_length_15057_cov_39.8949 . gene 9437 13070 . + . ID=g11149;Name=g11149.t1 NODE_986_length_15057_cov_39.8949 . mRNA 9437 13070 . + . ID=g11149.t1;Parent=g11149;Name=g11149.t1 NODE_986_length_15057_cov_39.8949 . five_prime_UTR 9437 9472 . + . ID=g11149.t1.utr5p1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . five_prime_UTR 9588 9611 . + . ID=g11149.t1.utr5p2;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 9437 9472 . + . ID=g11149.t1.exon1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 9588 9645 . + . ID=g11149.t1.exon2;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 9612 9645 . + 0 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 10032 10368 . + . ID=g11149.t1.exon3;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 10032 10368 . + 2 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 10658 10841 . + . ID=g11149.t1.exon4;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 10658 10841 . + 1 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 11111 11443 . + . ID=g11149.t1.exon5;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 11111 11443 . + 0 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 11736 12085 . + . ID=g11149.t1.exon6;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 11736 12085 . + 0 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 12350 12464 . + . ID=g11149.t1.exon7;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 12350 12464 . + 1 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . exon 12770 13070 . + . ID=g11149.t1.exon8;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . CDS 12770 12859 . + 0 ID=cds.g11149.t1;Parent=g11149.t1 NODE_986_length_15057_cov_39.8949 . three_prime_UTR 12860 13070 . + . ID=g11149.t1.utr3p1;Parent=g11149.t1 #PROT g11149.t1 g11149 MASVVLARARLVSRASTVAPRLSAAYSTAPATPAAPATPAPKPPRSYGNLKDSDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGTDWILGEVKKSGLRGRGGAGFPSGIKWGFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGARAAYIYIRGEFYNEASNMQVAINEAYQAGLLGKNACGSGYDFDVYMHRGAGAYICGEETALIESLEGKAGKPRLKPPFPADIGLFGCPTTVANVETVAVAPAICRRGGEWFASFGRDRNQGTKLFCISGQVNNPCTVEEEMSIPLKELIERHAGGVIGGWDNLLAIIPGGSSVPLLPRKICDTVLMDFDALRDVQSGLGTAAIIVMNKQADPIKCISRLSDFYKHESCGQCTPCREGTGWLAKMMERFVTGEARIEEIDMIEELSRQIEGHTICALGDAAAWPVQGLIRHMRPVMEERIAQFRANNQERVAAAH* # ORIGINAL: g11148.t1 original gene structure, not modified by PASA NODE_986_length_15057_cov_39.8949 AUGUSTUS gene 5319 8681 . + . ID=g11148;Name=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS mRNA 5319 8681 . + . ID=g11148.t1;Parent=g11148;Name=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 5319 5513 . + . ID=g11148.t1.exon1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 5319 5513 . + 0 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 5821 6648 . + . ID=g11148.t1.exon2;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 5821 6648 . + 0 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 6824 6892 . + . ID=g11148.t1.exon3;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 6824 6892 . + 0 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 7102 7262 . + . ID=g11148.t1.exon4;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 7102 7262 . + 0 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 7434 7669 . + . ID=g11148.t1.exon5;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 7434 7669 . + 1 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 7925 7977 . + . ID=g11148.t1.exon6;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 7925 7977 . + 2 ID=cds.g11148.t1;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS exon 8271 8681 . + . ID=g11148.t1.exon7;Parent=g11148.t1 NODE_986_length_15057_cov_39.8949 AUGUSTUS CDS 8271 8681 . + 0 ID=cds.g11148.t1;Parent=g11148.t1 #PROT g11148.t1 g11148 MCACTELWEGTLCDAPKRPAKPNATVDSHSAHLIGIRLYGTNDTTAQKLVYQVGRIGCPPVDDLIVNGTNTDVFIDTRNLLQRQLYSYTVKAYNPYDPEKKVVSETAILLASAMSDLDPPMKPTSVVSTLVVGSVGKPAVNVSWIADDTTTDTHISRSDGATFLTTNPRFYVDESVITGETYVYTVRNRNTYGESDPADSSSVVVLDVGGGARASSGSTNTGAIAGGVVASIVGAVAGVAAFLWFRRHRDRREKELLARSELAMIDTIVRRPEIVDLEVAGDRVHVLARIGEGEFGEVYRCEVEMYGQSGMTKVTAAMKTFKVTALSSAEEIRSARSAFMQEIDLMRQVPAHPHVVELLGVCTQSEPNGMLLSFAAHGDLRHYIQSADKELSVADLTCFCIDIARGMEHLAKCQIVHRDLAARNCMVYAGPRPSHAQEMGWKLSARGGVIVKIADFGLSRDTGASGDYYLAKTRRKLPMKWLAPESLAIRVYTTATDVWSYGITMWEAYSRGAKPYPGLDNHDVVRFLQQNKRMDAPEHCPADAFAVMEACWRKHPETRPSFTDIVLRLRRVMAGLSGQMPGYEYAESESFDGKPSGGVGGKKGSFPASRNAGAYVETMPDLTPLISSHLDVNQASASLYREIAEDQSMA* # PASA_UPDATE: g2855.t1, single gene model update, valid-1, status:[pasa:asmbl_8630,status:12], valid-1 NODE_6405_length_574_cov_171.695_potentialcontaminant . gene 113 563 . - . ID=g2855;Name=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . mRNA 113 563 . - . ID=g2855.t1;Parent=g2855;Name=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . five_prime_UTR 448 563 . - . ID=g2855.t1.utr5p1;Parent=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . exon 342 563 . - . ID=g2855.t1.exon1;Parent=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . CDS 342 447 . - 0 ID=cds.g2855.t1;Parent=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . exon 113 219 . - . ID=g2855.t1.exon2;Parent=g2855.t1 NODE_6405_length_574_cov_171.695_potentialcontaminant . CDS 113 219 . - 2 ID=cds.g2855.t1;Parent=g2855.t1;3_prime_partial=true #PROT g2855.t1 g2855 MSVQTEPGTPPGLLLKMLHGLQTPSRAGSSDELSCESPSSAKRKRESDFFSVKLELVSEFGTNYRCDILDK # PASA_UPDATE: g13334.t1, single gene model update, valid-1, status:[pasa:asmbl_2494,status:12], valid-1 NODE_173_length_33473_cov_41.7506 . gene 15910 24667 . + . ID=g13334;Name=g13334.t1 NODE_173_length_33473_cov_41.7506 . mRNA 15910 24667 . + . ID=g13334.t1;Parent=g13334;Name=g13334.t1 NODE_173_length_33473_cov_41.7506 . five_prime_UTR 15910 16074 . + . ID=g13334.t1.utr5p1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 15910 16213 . + . ID=g13334.t1.exon1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 16075 16213 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 16466 16606 . + . ID=g13334.t1.exon2;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 16466 16606 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 16787 17158 . + . ID=g13334.t1.exon3;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 16787 17158 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 17388 17870 . + . ID=g13334.t1.exon4;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 17388 17870 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 18034 18186 . + . ID=g13334.t1.exon5;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 18034 18186 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 18353 18502 . + . ID=g13334.t1.exon6;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 18353 18502 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 18896 19028 . + . ID=g13334.t1.exon7;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 18896 19028 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 19378 19547 . + . ID=g13334.t1.exon8;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 19378 19547 . + 1 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 19787 20194 . + . ID=g13334.t1.exon9;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 19787 20194 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 20459 20637 . + . ID=g13334.t1.exon10;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 20459 20637 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 20920 20949 . + . ID=g13334.t1.exon11;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 20920 20949 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 21170 21529 . + . ID=g13334.t1.exon12;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 21170 21529 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 21714 21764 . + . ID=g13334.t1.exon13;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 21714 21764 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 22073 22128 . + . ID=g13334.t1.exon14;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 22073 22128 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 22402 22519 . + . ID=g13334.t1.exon15;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 22402 22519 . + 1 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 22789 22848 . + . ID=g13334.t1.exon16;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 22789 22848 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 23175 23252 . + . ID=g13334.t1.exon17;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 23175 23252 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 23561 23627 . + . ID=g13334.t1.exon18;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 23561 23627 . + 0 ID=cds.g13334.t1;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . exon 23970 24667 . + . ID=g13334.t1.exon19;Parent=g13334.t1 NODE_173_length_33473_cov_41.7506 . CDS 23970 24667 . + 2 ID=cds.g13334.t1;Parent=g13334.t1 #PROT g13334.t1 g13334 MSPKMQSFTATFHIALTLCVLLGALAPTTSDAKEIALLVSAPVEYADGSTNAFFSRVKTGCVKAVLEFFGSAVHNCTFRQETPSVAAVIKYSVAATHMHIFGIGFEWAEHIENVAKNASLSAGVSYSLVDAQPTSPLANVQGILFAEDQGGFMAGFVAGLFTKSNIVGVVAGRPFNALRKFRNGFLNGVHFVCPFCSVLGTYINTFSDTVEAIAATKAQLDQGADVLFPAAGGVSEACALYAAGREAYVIGVDSDFRLTSFRNASDPRTQMLITSSEKRTDVAAYLSLKDKFEGRFAGGTKVIDVSVDGLLLSECSSNRTCAKYVEQITTTETQSQDCTVIRLQSREQRIRAIRAQLASRQLATGVDSAGDLSDIVHPANREWAPLRPYGLPPLPIQGHSVTVTPDNILVVFGGETGDAVVADTYQLDFDNLDWTRVKPPTAPPARVSHTAVLYAGRVIVYGGLSPNRTTLDDTWSYNTGDRTWTVVNTTATPRGRALHAAVVSGSEMFVYGGSSSLTVLSELWSLNLATLVWRQYGPLSSVRPPALLGAVLLAPASNTLYLFGGQQTTVATNKLYAFDIETRVWQILTPSAGPSPPRVWHHAGIVLDARRLLFVGGIADDTIVPTVSLYNIPRNEWIVGESSDIPKPTHSHALVMFNQSAKATACRFAADPTITVCTPQQRPILAVLGGVDTNGITNAMFVTLVISESVAGIDVVPPSSDDLGLKVALPVVLSACLVAMVSGFVFFRYKSQKIEKESKNWIIDFGELEFLSQLGEGGYGKVFLCMYRGSQVAVKTLRVGAFDVGGRALEHFEHIRQMEATAIDSTGGDLPEGKLVSRSTLDTSARRLRNQQHTVSPAKRTIVDRAGEAMAAKAGEKIAHAGLRKSGKEIAKERAKIKRAMANFVTEIETMCKLRHPNIVMFMGASINMEELCIVTEFMSAGSLYDLYRNPQFTLGWERCIAILLDSARGMQFLHSAKPPILHLDIKSANLLCEGTTYKCKIADFGLASLQTDTTRLLNGPRGTILWMAPELMVESQDMLTTKADVYSFGIVMTELLNRALPYSEHKVTSDPKSLGRLVVNIARGLRPSVLAGCSVPFKDLVRKCLHGTPSMRPDFDEIADSLADLQFQPFDESIFHVALTKLAERIAAKAALEKADADADAAAVVAPKNNSVLPIDPTPSASGISNIATELENTTAVGVAVAVQPPTLPLGISASNQRRRDSEALLHVGGDVAEDDDTPVNGTIRSMQAIGPRFSDGDDVVRTTARPQFESLHHGNDFHA* # PASA_UPDATE: g13329.t1, single gene model update, valid-1, status:[pasa:asmbl_2488,status:12], valid-1 NODE_173_length_33473_cov_41.7506 . gene 207 1047 . - . ID=g13329;Name=g13329.t1 NODE_173_length_33473_cov_41.7506 . mRNA 207 1047 . - . ID=g13329.t1;Parent=g13329;Name=g13329.t1 NODE_173_length_33473_cov_41.7506 . five_prime_UTR 980 1047 . - . ID=g13329.t1.utr5p1;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . exon 731 1047 . - . ID=g13329.t1.exon1;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . CDS 731 979 . - 0 ID=cds.g13329.t1;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . exon 418 532 . - . ID=g13329.t1.exon2;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . CDS 418 532 . - 0 ID=cds.g13329.t1;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . exon 207 289 . - . ID=g13329.t1.exon3;Parent=g13329.t1 NODE_173_length_33473_cov_41.7506 . CDS 207 289 . - 2 ID=cds.g13329.t1;Parent=g13329.t1;3_prime_partial=true #PROT g13329.t1 g13329 MSAGMLRACSVAAAVIAVAVLTHVVPMGAAQAVQRSFSLHRPYIGAGLDIPYWDFGGSTVVADDYVRLTPDRQSKQGYLWAKLPNHMTAWELTIDFKVWGQGKRLFGDGWAFWYTKERAEMGAVFGSKDYFTGLAVFFDTYSNHNGHHN # ORIGINAL: g13333.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 9882 15333 . + . ID=g13333;Name=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 9882 15333 . + . ID=g13333.t1;Parent=g13333;Name=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 9882 9962 . + . ID=g13333.t1.exon1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 9882 9962 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 10216 10545 . + . ID=g13333.t1.exon2;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 10216 10545 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 10858 11096 . + . ID=g13333.t1.exon3;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 10858 11096 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 11344 11491 . + . ID=g13333.t1.exon4;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 11344 11491 . + 1 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 11636 11695 . + . ID=g13333.t1.exon5;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 11636 11695 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 12119 12363 . + . ID=g13333.t1.exon6;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 12119 12363 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 12579 12881 . + . ID=g13333.t1.exon7;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 12579 12881 . + 1 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 13113 13230 . + . ID=g13333.t1.exon8;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 13113 13230 . + 1 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 13389 13516 . + . ID=g13333.t1.exon9;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 13389 13516 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 13726 13819 . + . ID=g13333.t1.exon10;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 13726 13819 . + 1 ID=cds.g13333.t1;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 14056 15333 . + . ID=g13333.t1.exon11;Parent=g13333.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 14056 15333 . + 0 ID=cds.g13333.t1;Parent=g13333.t1 #PROT g13333.t1 g13333 MASPLPPVRMPPPLRLITRRRNFTPTAEELSRLSTLSDGELRLVVYRNRLNVLCRRWIIRFLRSHKPATEDLWRAVTNQRILPEVDLTSLDFDSMCCQLLREGDFRRLNRVLFELACLHVPEKAMHVRDPDVLRRHELMEVLYRHDIDVSNVQVESEGYRILAEEIRESVLGQCSWCRRFSMHILQQFNIVRRNVYTCLSCNNRTVACRAGALGNCKHMARGHATWDEESCIICSKEVADWAAEAKSARARCDWCDTSATHVLEKSGFDLMRVRDIYRCLNCNKRTLPCRKCDSFARGHGTFDDERCSRCVGVSEAEMCLAERRCSWCLEMGNHVLQQHNTLTRHVYKCDACQCQTIQCKSCVIGMARSSPGMAPADWRCVMCKEGIPWDTLHYFMLCRSRKEISTQATTDAASFARLESVLKRASNQKKLAFDAGMIRPFMVLVSMSAQERARVASLLDLNMFVYSFRLVGSPGLEDMSEVLSTDVIDDLAHKEAWHIIGADFSGIQARSNEFYQTFNANWDGTLYGVCKTVFNSACRKLELRHRESMRRCLNASDARLQELEAEIIERFGRMNKWVDVAKSMSGGGETGSTGSDSSSASLLSSEPSPRKSDTERCSDAFREAVWSALTWSSSRGDPAPMPRARRSSLAEDAVGISTGDISTTSEKLDGAGKFSADALFGQAATLGLQLAVMESAQITVSMGFALAGEILAATSVVLAVVAGVFLLWDVLHLLFGTSFSRLFPSVLIITAAARQLEERVATYGNGRTLAYFVYTGDTCDLPDDDSNSRRRSIVDVIGGIFTPSPASKLPRARTGSYASLGSEESVSGVSDSPGSMRAGANGAESASPPSAPSSAAGGDMASSTHSSIVGGGMASASVLLVRAHSIQDGAAAEIAVHTHDADTPATPSSSSPSAGTIAGDTERTPRTRRDSAERSMKRRPSLLDSFLQLVNNEAASPPQSTREDGDVAALMRVAGSDELEAIEGVDEDQEDYFVCATNDRSALQFMH* # ORIGINAL: g13336.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 25177 25968 . - . ID=g13336;Name=g13336.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 25177 25968 . - . ID=g13336.t1;Parent=g13336;Name=g13336.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 25177 25968 . - . ID=g13336.t1.exon1;Parent=g13336.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 25177 25968 . - 0 ID=cds.g13336.t1;Parent=g13336.t1 #PROT g13336.t1 g13336 MRVIDVHKKSLIEEEGYNSFAEWAAASLSHVYIGRSMEHYVPGTKQSPLHNPFSVKTYGRDGCIREFERHLLSRDDLLRKVDELPADAVLGCWCHPEPCHGHVIVRVRAQRDAQRGPSSAGAMATSVTTTCTAASDASLKGLPAELCLQTTAPVSAGKSAKQTPPLTLSPAPTALQLTDAMDYPPIAPAGAPIGRKKQRRPMAGGGGSSAAGVALAIPTSAGASSGAAACSPSLAPPPATSPQSRVPAPALTYAQRAASKKAS* # PASA_UPDATE: g13332.t1, single gene model update, valid-1, status:[pasa:asmbl_2489,status:12], valid-1 NODE_173_length_33473_cov_41.7506 . gene 7698 8976 . - . ID=g13332;Name=g13332.t1 NODE_173_length_33473_cov_41.7506 . mRNA 7698 8976 . - . ID=g13332.t1;Parent=g13332;Name=g13332.t1 NODE_173_length_33473_cov_41.7506 . five_prime_UTR 8948 8976 . - . ID=g13332.t1.utr5p1;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . exon 8310 8976 . - . ID=g13332.t1.exon1;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . CDS 8310 8947 . - 0 ID=cds.g13332.t1;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . exon 8002 8221 . - . ID=g13332.t1.exon2;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . CDS 8002 8221 . - 1 ID=cds.g13332.t1;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . exon 7698 7856 . - . ID=g13332.t1.exon3;Parent=g13332.t1 NODE_173_length_33473_cov_41.7506 . CDS 7698 7856 . - 0 ID=cds.g13332.t1;Parent=g13332.t1 #PROT g13332.t1 g13332 MARSFAVATAVVACIVAVAFAFPSEYDEDTTVRVTLRVHSGTRDPTWMLNSTQTADLTTLLGTHYADPVATNRVVGYLGFVLSVGLAPRGIVVRGIPEVEKYLLATMPSGSVSDAAMQHVVDIISEYEAARRANTVCAAHGEECGSKRSACCGGFGCEVDASGKATCQPVDISLVAGAGDCSATVVGPDTVPVYDPSTDDAGCFISEQSENNCYDYGNDIATDTFAQPGRGSGHKWTANTCDAIQTAAVFDGLQWVGTTLPTDAPAKGHYVAMLIWPDTNFHWIRKDTTGWSHKPGGTAVRNTDNNGDAITDPSKSDFSPWTQFCGYFTTVPSNVTIN* # ORIGINAL: g13331.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 6367 7170 . - . ID=g13331;Name=g13331.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 6367 7170 . - . ID=g13331.t1;Parent=g13331;Name=g13331.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 6367 7170 . - . ID=g13331.t1.exon1;Parent=g13331.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 6367 7170 . - 0 ID=cds.g13331.t1;Parent=g13331.t1 #PROT g13331.t1 g13331 MVRVLSFLSAVGQDAFAPVAPPIVTPAAAADGTDRPGKRQKVGDGATCTEETKSSGVKNEDAEDESDEGDLPTGMVLGNRDVWPYYWRLMFIAAYRRIQSLEADSVEGLTKEYILRSLLAACPAVFTEPDDDDSYDMNIVVARIVSAVRNPPPVKLKQLLSKEIIPAMCAAGLGPVIWFARLHCSVSQEDIPPHFQYMDNCLIRQAHVMLELLLPFMAKTKEALAGTPYAVEFEHSHYNIADDDRMDSLLSHFRRAASKPDVYGIIE* # PASA_UPDATE: g13338.t1, single gene model update, valid-1, status:[pasa:asmbl_2490,status:12],[pasa:asmbl_2491,status:12],[pasa:asmbl_2492,status:12], valid-1 NODE_173_length_33473_cov_41.7506 . gene 27646 33025 . - . ID=g13338;Name=g13338.t1 NODE_173_length_33473_cov_41.7506 . mRNA 27646 33025 . - . ID=g13338.t1;Parent=g13338;Name=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 32976 33025 . - . ID=g13338.t1.exon1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 32976 33025 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 32659 32825 . - . ID=g13338.t1.exon2;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 32659 32825 . - 1 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 32043 32441 . - . ID=g13338.t1.exon3;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 32043 32441 . - 2 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 31471 31625 . - . ID=g13338.t1.exon4;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 31471 31625 . - 2 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 31220 31249 . - . ID=g13338.t1.exon5;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 31220 31249 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 30979 31009 . - . ID=g13338.t1.exon6;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 30979 31009 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 30512 30822 . - . ID=g13338.t1.exon7;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 30512 30822 . - 2 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 30185 30247 . - . ID=g13338.t1.exon8;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 30185 30247 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 29588 29642 . - . ID=g13338.t1.exon9;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 29588 29642 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 29178 29296 . - . ID=g13338.t1.exon10;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 29178 29296 . - 2 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 28765 28822 . - . ID=g13338.t1.exon11;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 28765 28822 . - 0 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 28360 28495 . - . ID=g13338.t1.exon12;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 28360 28495 . - 2 ID=cds.g13338.t1;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . exon 27646 28129 . - . ID=g13338.t1.exon13;Parent=g13338.t1 NODE_173_length_33473_cov_41.7506 . CDS 27646 28129 . - 1 ID=cds.g13338.t1;Parent=g13338.t1 #PROT g13338.t1 g13338 MYVFGGTTTLTIVNELWELDLNTLRWTQLLPATAVAPIPLRKAVMLHVAGTLYVFGGQSSNSHTNGLYAFDIASRTWRQLSPSGTAPAGVSQHAGVVLDARRLLFAGGLTVAGTSRLNVVYNIALNAWVQGESRQLAKAAHSMSLVVFVQSAKTDVCVYPEATYLQICVPQSQPMILAFGGIDPDGVSANLAGVFSINEDPQNSPSAGSSGGVNTLAIVLPVVLTSVAIILGAGFLLYRRKTKLVETQSRNWTIDFKELEFIKKIGEGSYGKVFLANWRGSEVAVKTLSSGSLDAGSRALSLRERKMRSQDSQLTGVSSGDSASLAPSGLPTQQSAKSDNSHNRTIYDTVAEDMAVFAVTAKDRRKVNKKKEKKLREKRINEFLAEIDTMCKLRHPNIVMFMGASINTNELCIVTEFMNNGSLDSLLREPSFVFDWRQCIEMLLDASRGMEYLHSAKPPILHLDIKSANLLSDSKGRIKVADFGLSVLQTTATKLLDGPKGTILFMAPELLRAEQCGCPADVFSFGIVICEVLTRRYPYEEDNCGNDAGYEKALHEALGRILLGVAFSGQRPEIPHDTPTEMANLFRQCVHQEADSRPTFSAVSLELTDCMTKCASWSTGALTRAHASIVVRAAKAQQAQDTYSTAASRSVDAPIHVPAGEGSPAHVAAAVKDDDHAAIVDEILA* # ORIGINAL: g13337.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 26389 27004 . + . ID=g13337;Name=g13337.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 26389 27004 . + . ID=g13337.t1;Parent=g13337;Name=g13337.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 26389 26469 . + . ID=g13337.t1.exon1;Parent=g13337.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 26389 26469 . + 0 ID=cds.g13337.t1;Parent=g13337.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 26729 27004 . + . ID=g13337.t1.exon2;Parent=g13337.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 26729 27004 . + 0 ID=cds.g13337.t1;Parent=g13337.t1 #PROT g13337.t1 g13337 MDDETDGDRNQYGSVWDFGSVHALNLEKYQMCVLWVVSTVLVSGTAPNVTDVSALDRGTVNALNLEECLGVTDVSALGGVVWLNLGGCEGVTDVSMLAGVSVLYDYYRKRLRCPSSIV* # ORIGINAL: g13330.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 1769 6117 . + . ID=g13330;Name=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 1769 6117 . + . ID=g13330.t1;Parent=g13330;Name=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 1769 1810 . + . ID=g13330.t1.exon1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 1769 1810 . + 0 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 1946 2031 . + . ID=g13330.t1.exon2;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 1946 2031 . + 0 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 2167 2345 . + . ID=g13330.t1.exon3;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 2167 2345 . + 1 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 2438 3667 . + . ID=g13330.t1.exon4;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 2438 3667 . + 2 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 3884 4015 . + . ID=g13330.t1.exon5;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 3884 4015 . + 2 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 4272 4398 . + . ID=g13330.t1.exon6;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 4272 4398 . + 2 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 4548 4609 . + . ID=g13330.t1.exon7;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 4548 4609 . + 1 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 4771 4898 . + . ID=g13330.t1.exon8;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 4771 4898 . + 2 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 5052 5157 . + . ID=g13330.t1.exon9;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 5052 5157 . + 0 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 5428 5531 . + . ID=g13330.t1.exon10;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 5428 5531 . + 2 ID=cds.g13330.t1;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 5818 6117 . + . ID=g13330.t1.exon11;Parent=g13330.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 5818 6117 . + 0 ID=cds.g13330.t1;Parent=g13330.t1 #PROT g13330.t1 g13330 MAAVAEQQEATTGRFRLSEVSGEDAAAEILKKAGPLEALAFSKLADLVKKGVLKKEDEKEISFVFSNSPTDLFDAEVDEFYSYAEDAEFLAGHADFNTEFKKEWRSASASERASFIDTCLDALESGNALRRQRLLRALLYVAQGVFVESSSRREQIDLWRANCDIIYLRGGLALLAGAAAGEIARLRSESAAAVSDAAARDREREREKEREREKDVHGQGLGLGKRRPSREAKKEPARPHASTKGPTMASNAHLRTLLNILHCVVHAASISHPDELSDELARPLTSQSSFAASGAAMTLPAALFDGVAAYDQALQLPVRKLLLLLRRCLDAVFRGEDGRAERRSQLMREAGLPDGQPPVPKASHGALENFAAHTTDRFYGYFQPVDSAAALRAAAAAAVCAGVVNVTPVAPLPPPISEGLAVMRGHLQVTLADKQLAEEGCTYGRNRALAPTGAAALDDRERRGANPVAHPAEALYTSLLPRLPRGVIVMLKTVLACAPLPTPSLLHVTSEVDNGATTRTVVQAMEHNIDTARHREIILRTCIEVLLVLFRHWKVNHILQAEHLSQLLVDANCLVLLLKILNGDMLAYITAKNELPFYSFMAWSRRAAEGVLEPQAADEEAAETKPAPHRNLTAVVSMLRLLQKLTKRKSVRIQTMVHFKAPAILKRLMPLPDAILQIYALKLVKSQIKFLGRKWRQGNMRVLSAIYLRVRTGLHDDWAYAAESDIDQEESKLCEATLRDAVDTFNRRHYTEVEGGVLARDTFSPADIDALDADIFAALADEAAHIPLAEATALFARDGCHPDRRSPGEGACAALGLGADDAEWWTEYIVA* # ORIGINAL: g13335.t1 original gene structure, not modified by PASA NODE_173_length_33473_cov_41.7506 AUGUSTUS gene 24711 24971 . + . ID=g13335;Name=g13335.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS mRNA 24711 24971 . + . ID=g13335.t1;Parent=g13335;Name=g13335.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS exon 24711 24971 . + . ID=g13335.t1.exon1;Parent=g13335.t1 NODE_173_length_33473_cov_41.7506 AUGUSTUS CDS 24711 24971 . + 0 ID=cds.g13335.t1;Parent=g13335.t1 #PROT g13335.t1 g13335 MDTCDHFDPGVPIVYNTRPNSNIYSGLRVPTTPALEWIGLWSEIALRCFGSAADATGCIWATKHAAGSRGRAGTQRHGLIVIPLEA* # PASA_UPDATE: g5655.t1, single gene model update, valid-1, status:[pasa:asmbl_8549,status:12], valid-1 NODE_625_length_20008_cov_44.4161 . gene 7158 8517 . - . ID=g5655;Name=g5655.t1 NODE_625_length_20008_cov_44.4161 . mRNA 7158 8517 . - . ID=g5655.t1;Parent=g5655;Name=g5655.t1 NODE_625_length_20008_cov_44.4161 . five_prime_UTR 8425 8517 . - . ID=g5655.t1.utr5p1;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . exon 8326 8517 . - . ID=g5655.t1.exon1;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . CDS 8326 8424 . - 0 ID=cds.g5655.t1;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . exon 7596 7916 . - . ID=g5655.t1.exon2;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . CDS 7596 7916 . - 0 ID=cds.g5655.t1;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . exon 7158 7265 . - . ID=g5655.t1.exon3;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . CDS 7224 7265 . - 0 ID=cds.g5655.t1;Parent=g5655.t1 NODE_625_length_20008_cov_44.4161 . three_prime_UTR 7158 7223 . - . ID=g5655.t1.utr3p1;Parent=g5655.t1 #PROT g5655.t1 g5655 MGGCLSAGPSPDLLKEIGDIALEQLKEFPKTFMDKLKETEEEMQNAAPEPYNGLLASEYPAKNLAKVIKYVLKETATDAFKGIIKDSIKAAISGDVEAAKAAIPNEVGQSLFQKAIDKAIDKAVDVAIDKAVEKIEEKLKKGEATAEPAKSAE* # PASA_UPDATE: g5656.t1, single gene model update, valid-1, status:[pasa:asmbl_8550,status:3], valid-1 NODE_625_length_20008_cov_44.4161 . gene 9433 16395 . - . ID=g5656;Name=g5656.t1 NODE_625_length_20008_cov_44.4161 . mRNA 9433 16395 . - . ID=g5656.t1;Parent=g5656;Name=g5656.t1 NODE_625_length_20008_cov_44.4161 . five_prime_UTR 16070 16395 . - . ID=g5656.t1.utr5p1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 16054 16395 . - . ID=g5656.t1.exon1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 16054 16069 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 15734 15888 . - . ID=g5656.t1.exon2;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 15734 15888 . - 2 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 15141 15329 . - . ID=g5656.t1.exon3;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 15141 15329 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 14583 14801 . - . ID=g5656.t1.exon4;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 14583 14801 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 14214 14316 . - . ID=g5656.t1.exon5;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 14214 14316 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 13752 13867 . - . ID=g5656.t1.exon6;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 13752 13867 . - 2 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 13410 13492 . - . ID=g5656.t1.exon7;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 13410 13492 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 13102 13189 . - . ID=g5656.t1.exon8;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 13102 13189 . - 1 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 12855 12969 . - . ID=g5656.t1.exon9;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 12855 12969 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 12538 12707 . - . ID=g5656.t1.exon10;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 12538 12707 . - 2 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 12109 12274 . - . ID=g5656.t1.exon11;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 12109 12274 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 11683 11746 . - . ID=g5656.t1.exon12;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 11683 11746 . - 2 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 11370 11427 . - . ID=g5656.t1.exon13;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 11370 11427 . - 1 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 11057 11194 . - . ID=g5656.t1.exon14;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 11057 11194 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 10846 10939 . - . ID=g5656.t1.exon15;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 10846 10939 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 10603 10706 . - . ID=g5656.t1.exon16;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 10603 10706 . - 2 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 10161 10256 . - . ID=g5656.t1.exon17;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 10161 10256 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 9955 10047 . - . ID=g5656.t1.exon18;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 9955 10047 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . exon 9433 9767 . - . ID=g5656.t1.exon19;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . CDS 9609 9767 . - 0 ID=cds.g5656.t1;Parent=g5656.t1 NODE_625_length_20008_cov_44.4161 . three_prime_UTR 9433 9608 . - . ID=g5656.t1.utr3p1;Parent=g5656.t1 #PROT g5656.t1 g5656 MSLSSAHDHSVHGNSHGSGDSHATHTNRLAKEKSPYLLQHAHNPVDWYPWGEEAFREARARDVPIFLSVGYSTCHWCHVMERESFENGAVARILNENFVSIKVDREERPDVDRVYMSFVQATTGHGGWPLSVWLTPAGLQPFMGGTYFSPEDSFGRPGFGTVLLNIGRLWKSKRDDIVEEGSRLTQLLAAHSELKPPSKTGMSDDQVVKHAYEKFKGSFDETFGGFGAAPKFPRPAIFDFLLRFYARDPQSAQGKHALAMCTKTLKAISQGGMHDHIGSGFHRYSVDRIWHVPHFEKMLYDQAQLLVSYVDAFQITGDTDLAWAAKDIVTYVTRDLQDDSGAFFSAEDADSYPRQGSVEKSEGAFCVWTTDELRRILSDKVPGTDSTTAADIFISRYGVHSTGNVPRQQDPHGELAGQNVLFISATIAEISHKYAIPEESCKHVLDECRTKLLEIRKGRPRPHLDDKILVAWNGLMISGLARAAQAFDDVDLARLAGRAAGFFRAHMYDQHSKKLLRSFRQGPANISGFADDYAFLIRGLLDLYEAAGDEAWVRWAVELQESMDSQFWDAQSGGYFSSPEDDPNIIMRLKEDHDGAEPSPNSVSAMNLLRLGCMFDSDAYRGRAEQIFALYRGAMEDMPTAIPEMLASRLFAMVPTQLVAIGGSRNGLQRCELVRIVHEKFRPFKAVLQVDADSALIPERLPFARELRNAPLATAHICRNMACGMPTSSPQELRSLLDPEY* # PASA_UPDATE: g5657.t1, single gene model update, valid-1, status:[pasa:asmbl_8551,status:12], valid-1 NODE_625_length_20008_cov_44.4161 . gene 16792 19908 . - . ID=g5657;Name=g5657.t1 NODE_625_length_20008_cov_44.4161 . mRNA 16792 19908 . - . ID=g5657.t1;Parent=g5657;Name=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 19859 19908 . - . ID=g5657.t1.exon1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 19859 19908 . - 0 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 19462 19591 . - . ID=g5657.t1.exon2;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 19462 19591 . - 1 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 19076 19308 . - . ID=g5657.t1.exon3;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 19076 19308 . - 0 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 17969 18085 . - . ID=g5657.t1.exon4;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 17969 18085 . - 1 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 17640 17737 . - . ID=g5657.t1.exon5;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 17640 17737 . - 1 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . exon 16792 17263 . - . ID=g5657.t1.exon6;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . CDS 17175 17263 . - 2 ID=cds.g5657.t1;Parent=g5657.t1 NODE_625_length_20008_cov_44.4161 . three_prime_UTR 16792 17174 . - . ID=g5657.t1.utr3p1;Parent=g5657.t1 #PROT g5657.t1 g5657 MPATLLFLVMVYSGSQCLAYLSIPVVTVFKNVTNLFVAYGDMYFFNQRISRGVLASLLCMLLGSVLSCSTDVEFSAIGYAWLCLNCVATGGYALYLRRAKRLTGLGEFGMAYYNNVLTGALFVPIALVSGEASGALSFDLLWSGSFQAMLAISAVVGTFVGISAFWLVGVTSPTTYSIIGSLNKIPLTIISTFVFDAQMSSAGRLSIAFGLASGMMFSLAKLNEQKMPTNNAQQKLDV* # PASA_UPDATE: g5653.t1, single gene model update, valid-1, status:[pasa:asmbl_8554,status:12], valid-1 NODE_625_length_20008_cov_44.4161 . gene 136 1315 . + . ID=g5653;Name=g5653.t1 NODE_625_length_20008_cov_44.4161 . mRNA 136 1315 . + . ID=g5653.t1;Parent=g5653;Name=g5653.t1 NODE_625_length_20008_cov_44.4161 . exon 136 270 . + . ID=g5653.t1.exon1;Parent=g5653.t1 NODE_625_length_20008_cov_44.4161 . CDS 136 270 . + 0 ID=cds.g5653.t1;Parent=g5653.t1;5_prime_partial=true NODE_625_length_20008_cov_44.4161 . exon 545 667 . + . ID=g5653.t1.exon2;Parent=g5653.t1 NODE_625_length_20008_cov_44.4161 . CDS 545 667 . + 0 ID=cds.g5653.t1;Parent=g5653.t1 NODE_625_length_20008_cov_44.4161 . exon 900 1315 . + . ID=g5653.t1.exon3;Parent=g5653.t1 NODE_625_length_20008_cov_44.4161 . CDS 900 995 . + 0 ID=cds.g5653.t1;Parent=g5653.t1 NODE_625_length_20008_cov_44.4161 . three_prime_UTR 996 1315 . + . ID=g5653.t1.utr3p1;Parent=g5653.t1 #PROT g5653.t1 g5653 AVSRESLGERIPYLVWNASARITYVNNTLCKLVDTTPDDIMAKMKFAYNLVSPKADVWRSSCLHIGAVMSRSVTNYESTFTMSHRQGFRIRFRLKVDCARDPFTGKYLYSIGYCIPC* # ORIGINAL: g5654.t1 original gene structure, not modified by PASA NODE_625_length_20008_cov_44.4161 AUGUSTUS gene 2036 4696 . + . ID=g5654;Name=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS mRNA 2036 4696 . + . ID=g5654.t1;Parent=g5654;Name=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS exon 2036 3706 . + . ID=g5654.t1.exon1;Parent=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS CDS 2036 3706 . + 0 ID=cds.g5654.t1;Parent=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS exon 3885 4111 . + . ID=g5654.t1.exon2;Parent=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS CDS 3885 4111 . + 0 ID=cds.g5654.t1;Parent=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS exon 4294 4696 . + . ID=g5654.t1.exon3;Parent=g5654.t1 NODE_625_length_20008_cov_44.4161 AUGUSTUS CDS 4294 4696 . + 1 ID=cds.g5654.t1;Parent=g5654.t1 #PROT g5654.t1 g5654 MKGRRLIAGIAVVAAIIALVSLLAQSDQREQPQQKNNHVVEFAADYNSEAAILEIEEAEAELPVPLDDADSSEPRDAEQSADDMDAISASEEEAIIEGEGILDKTDFSPFNASAPFSSTTNGTSVELKDARRPATPAGDPFESVPLPLPIKSIGDFLLTSPFAHSNGTPILAAIPSGRYESLRQREVAAGLCLFDSLVRTEETWRAALFKLNRPTVVFRGGDWVMKRDNETYTAAARKNGVLLLKEEKPDLSLSTNVTAKGAWVTPIANLSGIICASVLDADAECLQGRQYPLLNRFQRVSRLHGLRNVLWKKDYFCRVMREVTAGYSNTFAGTALSPFTFPCFVLPADFNELKEFAKTRAASSPKGTKMSWIVKPPHGGAGIGIYVVDSFPELQKINESGTPALVQPYMNDPYLLNGYKFDLRTYVLVTSVSPLRIHMYEEGLVRVAGQPYDPRAMTGGKKTQFLTNVSVNKQFRKLSDLVWTFSKFRKYLARAGEDPDEVFERMYEAVTKVFISAEPAFLRHFHTLSPGYKCPQCYQVLGVDVIFNAQLWPIVIEVNGSPDMHLSNQRDSEFYDAIKKSMMSDALAITFGIARTVSPVLHYELRELGVGHVKELPCNNPRRFSLDYGLRLLERDALFGERSDFEAVRAAIDQEASKLAGNKTAHAVKQLEYWQCIDDDGLGMLVVDRKEQANMGGFIRLYPSRALGNSVDIVRLLRHVAPKLPGNAAATKGTYYYHPLAMALIGAQERLAAYRGVRKQLDRLTK* # PASA_UPDATE: g13161.t1, single gene model update, valid-1, status:[pasa:asmbl_167,status:12],[pasa:asmbl_169,status:12], valid-1 # PASA_UPDATE: g13161.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_168,status:12], valid-1 NODE_1044_length_14442_cov_41.9808 . gene 10682 14151 . - . ID=g13161;Name=g13161.t1 NODE_1044_length_14442_cov_41.9808 . mRNA 10682 14151 . - . ID=g13161.t1;Parent=g13161;Name=g13161.t1 NODE_1044_length_14442_cov_41.9808 . five_prime_UTR 14086 14151 . - . ID=g13161.t1.utr5p1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . five_prime_UTR 13763 13773 . - . ID=g13161.t1.utr5p2;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 14086 14151 . - . ID=g13161.t1.exon1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 13639 13773 . - . ID=g13161.t1.exon2;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 13639 13762 . - 0 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 13251 13356 . - . ID=g13161.t1.exon3;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 13251 13356 . - 2 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 12742 12946 . - . ID=g13161.t1.exon4;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 12742 12946 . - 1 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 12197 12467 . - . ID=g13161.t1.exon5;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 12197 12467 . - 0 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 11843 12025 . - . ID=g13161.t1.exon6;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 11843 12025 . - 2 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 11432 11571 . - . ID=g13161.t1.exon7;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 11432 11571 . - 2 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . exon 10682 11165 . - . ID=g13161.t1.exon8;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . CDS 10989 11165 . - 0 ID=cds.g13161.t1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . three_prime_UTR 10682 10988 . - . ID=g13161.t1.utr3p1;Parent=g13161.t1 NODE_1044_length_14442_cov_41.9808 . mRNA 10682 14151 . - . ID=g13161.t1.1.5b6be70a;Parent=g13161;Name=g13161.t1 NODE_1044_length_14442_cov_41.9808 . five_prime_UTR 14086 14151 . - . ID=g13161.t1.1.5b6be70a.utr5p1;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . five_prime_UTR 13763 13773 . - . ID=g13161.t1.1.5b6be70a.utr5p2;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 14086 14151 . - . ID=g13161.t1.1.5b6be70a.exon1;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 13639 13773 . - . ID=g13161.t1.1.5b6be70a.exon2;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 13639 13762 . - 0 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 13251 13356 . - . ID=g13161.t1.1.5b6be70a.exon3;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 13251 13356 . - 2 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 12742 12946 . - . ID=g13161.t1.1.5b6be70a.exon4;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 12742 12946 . - 1 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 12197 12467 . - . ID=g13161.t1.1.5b6be70a.exon5;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 12197 12467 . - 0 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 11843 12022 . - . ID=g13161.t1.1.5b6be70a.exon6;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 11843 12022 . - 2 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 11432 11571 . - . ID=g13161.t1.1.5b6be70a.exon7;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 11432 11571 . - 2 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . exon 10682 11165 . - . ID=g13161.t1.1.5b6be70a.exon8;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . CDS 10989 11165 . - 0 ID=cds.g13161.t1.1.5b6be70a;Parent=g13161.t1.1.5b6be70a NODE_1044_length_14442_cov_41.9808 . three_prime_UTR 10682 10988 . - . ID=g13161.t1.1.5b6be70a.utr3p1;Parent=g13161.t1.1.5b6be70a #PROT g13161.t1 g13161 MRDIQDAECVHAIAGVMKLYFRELPDPLFTFETYDKFIACARIREYDQVVSGVRESLRLLPQVNYDTLEFLITYLYKVSQNHAQNKMHPPNLAIVFGPTLLRPPATNMTAIITDAGHQGRLVELLIKECNWIFGKEGATASWDVPVTAEVTQQEEAAIELCESYGESMYENVPKYEPIYASTKTLQRSQSAELGTEDEADDDAPPPPPPDADNPELAAQLQSNEPPVIDTHPPPAAAGTSLYASPMKPPKPAGARPEAGALRPDMGELTAAVQKRTPSFSAPSAPLPPTPGQANMQPPAQAPPPPPTAPPAQAYEEMDNDVPPPPPDEDAPSTVDADGDMTPKFSARALYAYTAASDTELGFGAGDVLSVLEPDDDGWWKCQDASGAVAYAPASYLERIEG* #PROT g13161.t1.1.5b6be70a g13161 MRDIQDAECVHAIAGVMKLYFRELPDPLFTFETYDKFIACARIREYDQVVSGVRESLRLLPQVNYDTLEFLITYLYKVSQNHAQNKMHPPNLAIVFGPTLLRPPATNMTAIITDAGHQGRLVELLIKECNWIFGKEGATASWDVPVTAEVTQQEEAAIELCESYGESMYENVPKYEPIYASTKTLQRSQSAELGTEDEADDDAPPPPPPDADNPELAAQLQSNEPPVIDTHPPPAAGTSLYASPMKPPKPAGARPEAGALRPDMGELTAAVQKRTPSFSAPSAPLPPTPGQANMQPPAQAPPPPPTAPPAQAYEEMDNDVPPPPPDEDAPSTVDADGDMTPKFSARALYAYTAASDTELGFGAGDVLSVLEPDDDGWWKCQDASGAVAYAPASYLERIEG* # PASA_UPDATE: g13160.t1, single gene model update, valid-1, status:[pasa:asmbl_166,status:12],[pasa:asmbl_170,status:12], valid-1 NODE_1044_length_14442_cov_41.9808 . gene 214 7938 . - . ID=g13160;Name=g13160.t1 NODE_1044_length_14442_cov_41.9808 . mRNA 214 7938 . - . ID=g13160.t1;Parent=g13160;Name=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 7841 7938 . - . ID=g13160.t1.exon1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 7841 7938 . - 0 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 7177 7251 . - . ID=g13160.t1.exon2;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 7177 7251 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 6972 7043 . - . ID=g13160.t1.exon3;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 6972 7043 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 6709 6780 . - . ID=g13160.t1.exon4;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 6709 6780 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 6413 6484 . - . ID=g13160.t1.exon5;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 6413 6484 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 6147 6218 . - . ID=g13160.t1.exon6;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 6147 6218 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 5937 6008 . - . ID=g13160.t1.exon7;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 5937 6008 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 5622 5693 . - . ID=g13160.t1.exon8;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 5622 5693 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 5346 5417 . - . ID=g13160.t1.exon9;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 5346 5417 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 5044 5121 . - . ID=g13160.t1.exon10;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 5044 5121 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 4065 4203 . - . ID=g13160.t1.exon11;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 4065 4203 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 3156 3834 . - . ID=g13160.t1.exon12;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 3156 3834 . - 0 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 2632 2846 . - . ID=g13160.t1.exon13;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 2632 2846 . - 2 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 2130 2247 . - . ID=g13160.t1.exon14;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 2130 2247 . - 0 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 1815 1863 . - . ID=g13160.t1.exon15;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 1815 1863 . - 2 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 1311 1502 . - . ID=g13160.t1.exon16;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 1311 1502 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 1019 1152 . - . ID=g13160.t1.exon17;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 1019 1152 . - 1 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . exon 214 692 . - . ID=g13160.t1.exon18;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . CDS 256 692 . - 2 ID=cds.g13160.t1;Parent=g13160.t1 NODE_1044_length_14442_cov_41.9808 . three_prime_UTR 214 255 . - . ID=g13160.t1.utr3p1;Parent=g13160.t1 #PROT g13160.t1 g13160 MPLLSLHYSQLYQNQIAVLPSGIFDNLTALTTLQLQSNQIVAPPTGGIFSALLNLTTLYLGSNKISTIPSGIFDKLTSVTQLQLHSNEIVELPSGIFDKLTALSKLQLQSNKIAALPSGIFDKLTALTYLDLQSNKIVTLPSGIFDGLITLNTLYLISNNITTLPSGIFDNLTSLNDLALNSNKIMTLPSKIFDKLTNLRLLYLGSNSITTIPSGIFDKLTALTSLRLQSNNITTLPSGIFDKLTALTTAQLVNATMESSPYGVGIRLRWTHDEVGRRAWGPWHYEIKRSGCSSQVFQVGDTNTFLDGPLVLGADYLYFVTTINSKNVSSEKASAVIENLKKTDPPSPPFSVSSTPTLNPDNPLQPIIKFTWKEDTSSGPMIKTIISRDGIELLNGRTVTEYSDLNVEFGKTYAYEIVSVNEYGSSTPTQFNETASIGSIDSGMGGSSSSANVAGPIAGGVVGAVVGAAGVVLSILFVRKRSSRKKMDELARSELALIDTVVRRPEIAEIEISGSCILLRNRIGEGEFGEVYLADVTLASKGHAVVQAAVKTFKVTSLSSVDEIRSARSAFMAEIDLMRTIPSHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDRKGSQDFTSTDLLCFCIDIARGMEHLAKCQIVHRDLAARNCMVVAGPRSPSNSLEKGWKLSPKAQVIVKVADMGLSRDTGGSGDYYVAKTRRKLPVKWMAIESLQGRIFTHSSDVWSFGIVMWEVFARGAKPYPGVENHAVSTYLSLNKRMDPPKDCPTSVATVMEACWRKHPETRPAFAQVALQLQRAMAELCGGAAGSSGGGKNIYGTEPHKGGGTVGYGTELPYAQTASGNGGGGKKVNGTESHKGGGALGYRTDSYAQLVPEETYAETVPEDLTIEYGGILDA* # ORIGINAL: g12833.t1 original gene structure, not modified by PASA NODE_3106_length_4296_cov_35.8057 AUGUSTUS gene 242 3853 . + . ID=g12833;Name=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS mRNA 242 3853 . + . ID=g12833.t1;Parent=g12833;Name=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 242 344 . + . ID=g12833.t1.exon1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 242 344 . + 0 ID=cds.g12833.t1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 618 1133 . + . ID=g12833.t1.exon2;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 618 1133 . + 2 ID=cds.g12833.t1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 1427 2464 . + . ID=g12833.t1.exon3;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 1427 2464 . + 2 ID=cds.g12833.t1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 2751 2910 . + . ID=g12833.t1.exon4;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 2751 2910 . + 2 ID=cds.g12833.t1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 3300 3582 . + . ID=g12833.t1.exon5;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 3300 3582 . + 1 ID=cds.g12833.t1;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS exon 3842 3853 . + . ID=g12833.t1.exon6;Parent=g12833.t1 NODE_3106_length_4296_cov_35.8057 AUGUSTUS CDS 3842 3853 . + 0 ID=cds.g12833.t1;Parent=g12833.t1 #PROT g12833.t1 g12833 MRCNQAIAAIAVVLVIFTQCGAADAKLAPLTRRHGRDTQGNEIDPALLAQWKSGMLAWRSDFIAFAKEFNCVAPEFNVSSWLENILDENGGVLDWTTIEEGFQQAILAYKRLSIIENGRPCAIVPPGSPKCCTMGDNGIPNERVCLYNEYPGPLSWWEGGLTPNPPPGSRISNRANVWYVSSPRCCQSGYAVADVSSDPRYPWMCLALPTGASMNALMGTWGCTNQPGRMPYGLVCTSKGICSSYHPLPRGVPYPEGTEPGQYARCDCHAINDPLVGDADCLWAAGEVPHGQIINANSDAQAQSICLSGVAEILNPTAPVLYVCVLRTDCPLCASIDDPEWSPLSDGCKCAWPYGSVPGGKRVPAGDVDACLDKRAEPSKTNSSYDVCDCTSPADPAQKYEKCIWPPGKVPYGKPIYANLDPSVCITGWAVASSDPAYLVCACASPEDPQNNPDKNITCTYVGSTVPNMLQVPAGHSEFCEQKYAYAALMGKSPVAGFEYCSCASPDDDTLAQNVCTWLPGQVPPTYHTKSAADCFFGTLSEPDFTGLIPCGSPGGDQLNAYFTMIAGVQSSWSVGAWAFPSGSGQENAYRQFSYELSERATYDIRSLYGTAGLSKYATWLGQLSLEQASVALAVSTMTPPCDAACVSSVVSTLSAEFSDLGEMAGWQAIIDSWIVTMGGQVQDNVLPAALDVSLKGTETPTC* # PASA_UPDATE: g14438.t1, single gene model update, valid-1, status:[pasa:asmbl_1526,status:16],[pasa:asmbl_1527,status:12], valid-1 NODE_1419_length_11459_cov_55.4679 . gene 149 6021 . + . ID=g14438;Name=g14438.t1 NODE_1419_length_11459_cov_55.4679 . mRNA 149 6021 . + . ID=g14438.t1;Parent=g14438;Name=g14438.t1 NODE_1419_length_11459_cov_55.4679 . five_prime_UTR 149 150 . + . ID=g14438.t1.utr5p1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 149 381 . + . ID=g14438.t1.exon1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 151 381 . + 0 ID=cds.g14438.t1;Parent=g14438.t1;5_prime_partial=true NODE_1419_length_11459_cov_55.4679 . exon 583 890 . + . ID=g14438.t1.exon2;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 583 890 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 1229 1301 . + . ID=g14438.t1.exon3;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 1229 1301 . + 1 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 1487 1796 . + . ID=g14438.t1.exon4;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 1487 1796 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 1989 2082 . + . ID=g14438.t1.exon5;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 1989 2082 . + 2 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 2268 2332 . + . ID=g14438.t1.exon6;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 2268 2332 . + 1 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 2514 2595 . + . ID=g14438.t1.exon7;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 2514 2595 . + 2 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 2877 2957 . + . ID=g14438.t1.exon8;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 2877 2957 . + 1 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 3181 3337 . + . ID=g14438.t1.exon9;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 3181 3337 . + 1 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 3566 3747 . + . ID=g14438.t1.exon10;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 3566 3747 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 3993 4092 . + . ID=g14438.t1.exon11;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 3993 4092 . + 1 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 4380 4469 . + . ID=g14438.t1.exon12;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 4380 4469 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 4788 4880 . + . ID=g14438.t1.exon13;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 4788 4880 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 5230 5353 . + . ID=g14438.t1.exon14;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 5230 5353 . + 0 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . exon 5737 6021 . + . ID=g14438.t1.exon15;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . CDS 5737 6002 . + 2 ID=cds.g14438.t1;Parent=g14438.t1 NODE_1419_length_11459_cov_55.4679 . three_prime_UTR 6003 6021 . + . ID=g14438.t1.utr3p1;Parent=g14438.t1 #PROT g14438.t1 g14438 GGVMSMSSTLVNPSTKNIRIVGGGESSSLLVPPSESGHQRSPSADKRQRASIFGLTKQMFRSKSNEDVISEFPEESQSSRPVERQRSVEVDAASHRGSGDSESGPPDLKRLSFTSWNEEDLCDVIPVASSAEITSASASGAPDAQSKSKRFSITRADSLPELDSLRKAAANSERLRIKGSTPRERRRLASVLRDPTQAPTVKSKATVVAAPLAPPTPSNPGATSPSGSIKSGSGAVTTIKVSLLEGMTTMVPVTETTLNKEVLVKICKKRMLDEREYQLRLTDGSPVDPDIPFLSYGVEEITLSKKTQKMEHNLVEEGRVLVVSEDNHDVLMMKMIDGRFEIMSGTVGKLVERLADENNVDNQFVSTLLLTFRAFVKPHELFEKIVGRYRLVLGDNPTKEETEYFTKWKKIIQQKVIGFVIRWVEDYFFDFYENKHLLDDLFDFCDLLIKDEYTARGSELRIAIQAMLEKCEKLDLHLMPVDNTLLSSEERRKRAETMTKADKALDVLVVEPKVLAEQMTLCDHELFRNVHPIEFMHHLFAGEKVADYCPNLNRLISRFNKESHWIATEICLKVDVKARAKMIKKFILVGKHCVELNNFFAVFSIVGGLNLGPVRRMKKSWEGVDAKVIAVLKELESLMDPSFNMRVYREKLLQTKPPTIPLLPINLKDLLFIHDGNKGIIDGLVNFEKYRMVADVVRDIVAVSTVRYDQVDPMRPDKAVLVAHAGLQEYLMHPIVFNAMRLNTLSKEREP* # ORIGINAL: g14439.t1 original gene structure, not modified by PASA NODE_1419_length_11459_cov_55.4679 AUGUSTUS gene 6765 8270 . + . ID=g14439;Name=g14439.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS mRNA 6765 8270 . + . ID=g14439.t1;Parent=g14439;Name=g14439.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 6765 8270 . + . ID=g14439.t1.exon1;Parent=g14439.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 6765 8270 . + 0 ID=cds.g14439.t1;Parent=g14439.t1 #PROT g14439.t1 g14439 MEAESCGGGFSWPVHVPPANREMQRVGSGRDATSEAPEPFAADTHSHVMCMGHHRPPPHRRLLAGVVASVAVVLLLVWSDTPTATVQRWASLREMTTEGPSREPVLALFHRDGDEPSQTAAHPLTPAPPNAQPPTSPVTAFAALDADPEPEWFLCESQPSCVTQPSQPTANCGAAVVAQAHVRGRPADSDVDTYQERLFGQLAVCTLGSEPGRWLLRCPRDALTPLVVADDGTIVGGGVATDARDCDWVTARWQPYECRVPHLSVDKIRDCLDSVYVLAMGDEFVGGVVDAALRMGGLDAVAGTERAGSTGSAAGQGYHVYYHETDVSCGLDDRTLSRSALVQLTATAITATTTTTATATATATVTTTDCVPLEKLFAAFVANASRQAAKAMRREHGELGGTAKRLVVLNGGRSSPRDDAHRVRMLRKMADRSARLSPFKSRGSPAVVIFAATWFTAPQIGKSGAEDNQYKLSRATATGNGVKFLDARQASNGMETVGVPW* # ORIGINAL: g14440.t1 original gene structure, not modified by PASA NODE_1419_length_11459_cov_55.4679 AUGUSTUS gene 9024 11251 . - . ID=g14440;Name=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS mRNA 9024 11251 . - . ID=g14440.t1;Parent=g14440;Name=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 11198 11251 . - . ID=g14440.t1.exon1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 11198 11251 . - 0 ID=cds.g14440.t1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 10823 10994 . - . ID=g14440.t1.exon2;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 10823 10994 . - 0 ID=cds.g14440.t1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 10503 10600 . - . ID=g14440.t1.exon3;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 10503 10600 . - 2 ID=cds.g14440.t1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 10229 10332 . - . ID=g14440.t1.exon4;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 10229 10332 . - 0 ID=cds.g14440.t1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 9797 9872 . - . ID=g14440.t1.exon5;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 9797 9872 . - 1 ID=cds.g14440.t1;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS exon 9024 9329 . - . ID=g14440.t1.exon6;Parent=g14440.t1 NODE_1419_length_11459_cov_55.4679 AUGUSTUS CDS 9024 9329 . - 0 ID=cds.g14440.t1;Parent=g14440.t1 #PROT g14440.t1 g14440 MELLPPNAPSPRISEYDCLHSAIRPIDDRHIVFYEPVESDVIFHAGFTENIGGSEYSDRSAYAYHVYCNDVDANGVPKSKLLCHAFDSAKFKACMDDSRRLGVGALMTEFGALDGSAGAIDELNYLMGLSDENFQGWCYWQFKYFHDITTESAAEPFYAPNGTLEADKVRALARPYAPYIQGKPLLMSFDPRTRVFTLQYEYSRSITAPTELYLGDKMHYPEGFNASIEPAVGVALESPSVDAIGHRYIVAITNAVNDGSTVIVRISPK* # ORIGINAL: g873.t1 original gene structure, not modified by PASA NODE_5339_length_900_cov_87.2073 AUGUSTUS gene 2 900 . + . ID=g873;Name=g873.t1 NODE_5339_length_900_cov_87.2073 AUGUSTUS mRNA 2 900 . + . ID=g873.t1;Parent=g873;Name=g873.t1 NODE_5339_length_900_cov_87.2073 AUGUSTUS exon 2 900 . + . ID=g873.t1.exon1;Parent=g873.t1 NODE_5339_length_900_cov_87.2073 AUGUSTUS CDS 2 900 . + 0 ID=cds.g873.t1;Parent=g873.t1 #PROT g873.t1 g873 SLANCTFSNAKADLGGGVLMMQALAVAFFSNVTVVNSSTLNVGGGVFHLSGRSRLSVDALTVRTSSAYGIGGTLAMDGRATAEFDHLDVSDSAATFGQGGLAAVIGSTYFKLNNSLVRNTSSDAQGGMIHVTGVASAVLSNVTAYHVFSRDGDGGAFAVEFASALSLANVTVGHASTPFRGGVAYVGGTARLTAVGLVSVGSMSAEGGLLHIAAGAFASVTDAHISVSSADGNGGCMYSKSPRVVITGGHYSDCEAGAVEATYGQGGFLYYDAAADEPALNIHGVRLDRARAASAPVVF # ORIGINAL: g8387.t1 original gene structure, not modified by PASA NODE_2455_length_6203_cov_40.3988 AUGUSTUS gene 860 2023 . + . ID=g8387;Name=g8387.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS mRNA 860 2023 . + . ID=g8387.t1;Parent=g8387;Name=g8387.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS exon 860 2023 . + . ID=g8387.t1.exon1;Parent=g8387.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS CDS 860 2023 . + 0 ID=cds.g8387.t1;Parent=g8387.t1 #PROT g8387.t1 g8387 MDVAIEQPHGPWHLIPAEIWSTKILCYLRHPKDRKSLAHTAGWLLRALAWRRYMAIHVRNYLASMPVDASAIVDMRMWLQPHQLKVKCSDICVPHTAALHPLYTLPSIWIFRGEASNLCRLTSTLTRLSLTEVRNVGSLAPLVNVRYLALQMCDVTALPELPDSSAFQRVRISRCRHITSYRPLRMARTVKLDIFSDELDKCVDAFVGVSVIRLAVKHRPAWLPVATPALDCRQFSGCTHVYLDAHLLTNMECLCGLQTVLIHTSMDRLPVMRNIGSLRVYMRERRMEFRCLAGFENIGHLSLTNIARDAVVGKFINVRTLNVSGWKGMDIAAVASVDELVAQRCHFRGSMSAVNGIPVLRLVDCTLNGHELEEIDRRRVRIQNSQR* # ORIGINAL: g8386.t1 original gene structure, not modified by PASA NODE_2455_length_6203_cov_40.3988 AUGUSTUS gene 125 175 . - . ID=g8386;Name=g8386.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS mRNA 125 175 . - . ID=g8386.t1;Parent=g8386;Name=g8386.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS exon 125 175 . - . ID=g8386.t1.exon1;Parent=g8386.t1 NODE_2455_length_6203_cov_40.3988 AUGUSTUS CDS 125 175 . - 0 ID=cds.g8386.t1;Parent=g8386.t1 #PROT g8386.t1 g8386 MDTGGGDENATLQPPEK # PASA_UPDATE: g8389.t1, single gene model update, valid-1, status:[pasa:asmbl_4350,status:12], valid-1 NODE_2455_length_6203_cov_40.3988 . gene 4671 6203 . + . ID=g8389;Name=g8389.t1 NODE_2455_length_6203_cov_40.3988 . mRNA 4671 6203 . + . ID=g8389.t1;Parent=g8389;Name=g8389.t1 NODE_2455_length_6203_cov_40.3988 . five_prime_UTR 4671 4856 . + . ID=g8389.t1.utr5p1;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . exon 4671 4871 . + . ID=g8389.t1.exon1;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . CDS 4857 4871 . + 0 ID=cds.g8389.t1;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . exon 5283 5470 . + . ID=g8389.t1.exon2;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . CDS 5283 5470 . + 0 ID=cds.g8389.t1;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . exon 5620 5740 . + . ID=g8389.t1.exon3;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . CDS 5620 5740 . + 1 ID=cds.g8389.t1;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . exon 6013 6203 . + . ID=g8389.t1.exon4;Parent=g8389.t1 NODE_2455_length_6203_cov_40.3988 . CDS 6013 6203 . + 0 ID=cds.g8389.t1;Parent=g8389.t1;3_prime_partial=true #PROT g8389.t1 g8389 MPAAEKLRPDEAAKTVAAFRAKVEEWLPANKDKCYDADVDDIRRLDTLCLRYLTMRDFNVTAAFELARDNLLWRRSFGIREITEASLPREMFESGVFFMRGVDSKGCKVGIVRIRLHKKDGARGEEMKRFVAYHLNYHFSTAMATETEQITVLFDLSQAGLGNMVRVRVPP # PASA_UPDATE: g8388.t1, single gene model update, valid-1, status:[pasa:asmbl_4348,status:12],[pasa:asmbl_4349,status:12], valid-1 NODE_2455_length_6203_cov_40.3988 . gene 3006 4246 . + . ID=g8388;Name=g8388.t1 NODE_2455_length_6203_cov_40.3988 . mRNA 3006 4246 . + . ID=g8388.t1;Parent=g8388;Name=g8388.t1 NODE_2455_length_6203_cov_40.3988 . five_prime_UTR 3006 3032 . + . ID=g8388.t1.utr5p1;Parent=g8388.t1 NODE_2455_length_6203_cov_40.3988 . exon 3006 4246 . + . ID=g8388.t1.exon1;Parent=g8388.t1 NODE_2455_length_6203_cov_40.3988 . CDS 3033 4019 . + 0 ID=cds.g8388.t1;Parent=g8388.t1 NODE_2455_length_6203_cov_40.3988 . three_prime_UTR 4020 4246 . + . ID=g8388.t1.utr3p1;Parent=g8388.t1 #PROT g8388.t1 g8388 MARRRSARGLSGHPVNVDNADIAQLRQARDDALTRERRHQRRREPERIATQTEGRYAQVGVTDVLRAAATTALAGTTARTAITGNLRLQNRSHRPLASTGNFGTVAASDILTTPGTSDTDSDSGEDEKELIEMEANMAIDEDDLDGSDNSNANDVPQPNTGSGLTRDMRIAQYMSMRERLRNCAEIARNDLDATLNAAMSVLHDASDLTRDVNDPVILPPPLASAADAAEEHAGPSTTRVANMLTAPLRNYAMIPDAWPGESRIANPDPNEDLCMTCVERRTCTTFVPCGHSFLCVTCARTFACKTATCPVKCPTVGIIRVYRNTDVV* # PASA_UPDATE: g2172.t1, single gene model update, valid-1, status:[pasa:asmbl_3911,status:12], valid-1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . gene 76 1737 . + . ID=g2172;Name=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . mRNA 76 1737 . + . ID=g2172.t1;Parent=g2172;Name=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . five_prime_UTR 76 76 . + . ID=g2172.t1.utr5p1;Parent=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . exon 76 297 . + . ID=g2172.t1.exon1;Parent=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . CDS 77 297 . + 0 ID=cds.g2172.t1;Parent=g2172.t1;5_prime_partial=true NODE_2272_length_6958_cov_40.0234_potentialcontaminant . exon 527 1737 . + . ID=g2172.t1.exon2;Parent=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . CDS 527 1115 . + 1 ID=cds.g2172.t1;Parent=g2172.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . three_prime_UTR 1116 1737 . + . ID=g2172.t1.utr3p1;Parent=g2172.t1 #PROT g2172.t1 g2172 VIFRDPVYPDDFIFPARLLPGVAMPARELTDTDHKKNNGSFNNRNNGNSGNRVPSGPYQQRNPSYDTPAGRMIRHGTNAHAHQEAPRDHVSGGYRDSRGYYEDGYRANLSMDTRPRPQQPYYGGGAQGGYGGPPPSGAYGQYGPPPHQGGYPPQYGNYPPQGGYAQYGDGGQQGGYYGYPPQGAQPGYGNPRQQQYDYGAPPPQRPPVNLAWSRNVASSQPPPPQSYRTPDSNRYDSRNPTNHPYGGSYAPQGQQGHGHSAQSRDPRRR* # PASA_UPDATE: g2173.t1, single gene model update, valid-1, status:[pasa:asmbl_3910,status:12], valid-1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . gene 2252 6405 . - . ID=g2173;Name=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . mRNA 2252 6405 . - . ID=g2173.t1;Parent=g2173;Name=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . exon 6234 6405 . - . ID=g2173.t1.exon1;Parent=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . CDS 6234 6405 . - 0 ID=cds.g2173.t1;Parent=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . exon 2252 6073 . - . ID=g2173.t1.exon2;Parent=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . CDS 2562 6073 . - 2 ID=cds.g2173.t1;Parent=g2173.t1 NODE_2272_length_6958_cov_40.0234_potentialcontaminant . three_prime_UTR 2252 2561 . - . ID=g2173.t1.utr3p1;Parent=g2173.t1 #PROT g2173.t1 g2173 MLLHFGLDVPPQNDPSAAMEIDESQRVDTLCNPFDGTPPMQWTGSVDDLSEGSFMGASNSSFPVEMRSPSYLPVDPVREYVRRTALIADVKRELTSPGVRMDLRDDARSLQEDTSVRVIALTGMAGIGKTQLAASVSRDPDVGRRFPDGRFWLGVGRAWEGNALGCMTEIASLMGLDFGTVATNDILRGKIKSALAHKSVLLVLDDVCSAETLRCLAIAPTVLVTSRVADHVLADGAGVNVVGVPVGGMTIDESVALVANITGEPRERVWREARDVTVSALGHPLALALIGGQWYDGESWEGVAAGLEAASELSPRGDSAGYVSRVFERSVFRLSDTERLAFLDLVLLDDGERIPLSVCRLLRESAIWQKLAAVSAIQLSGGTGHEAVGLHDIAHEYLLLKTEDGDCDRADVCHRLLEANEARVRWPDERSRSYPGFIRHMLCNEVRYIREATECSAGAVDHVIKRRLRSTILNLKWLESRVTAGRAEETADECISGLLADLRRFSSGSRTAHYIERAVAASRPALREWPLLLAEVLYGRLEGLEGIDGTLMRQADERRRTLSLPFFTDPSMDSLGRLVCTLGETCRARRNSGRDEPLSICSLTMLGDHVVSGCVNGRVHLWDPKAGVELRVVGGESSAAGRAADVTCLATCGAYVVAGRADGIIQTWSGRTGRLGCHLRTDDTKSTLTCVSAVDRTLLTGQSAIDGGTDAALSRYLIVSGNRQGELRVWSPDATNPTPTPQTLVGHSGGVTCLAVVGPTVVSGGEDATVRVWDVAGLRELGVLHGHTDEVRCLAPLDMSSVLSGSKDGLLCEWDVRLGIGIRSFHADVGAILALVADASRVAFSGASGKVRVIDWPSGRTVWIQQTAHTARFVGLAGNGRVLVTDHDSHTLSVWDLTVDERSIRGSGKNASGVVIGSGAAASGTSRASAASSAGAEMPLQRPRIARLESFVAEGSVSVTCHCAPLGGEWVVVGCADGSLRWRRARDSSTYGGVVPAAHAGGITHLAAKGAAVVSVGYDGVRMWALDVRSGASLVLLFASSFGSPQQAVTAIAVFSGSIVVMGTADGGAYFVEWSRTGRSRMVPIYPGGSTSTVARDIAIISGSGQCHVVVSTVEGQIVAYNMRIRTVRQLASETWCNCPVAFLPHATRLFIVRPSAAGDGLCVGLLDASTGTIDDLREFSALINLLPEQFRRSVVKVMSVSMDSIGRFWFVSDKGDVVELNLPRLR* # ORIGINAL: g3059.t1 original gene structure, not modified by PASA NODE_5100_length_1023_cov_38.7785_potentialcontaminant AUGUSTUS gene 2 1003 . + . ID=g3059;Name=g3059.t1 NODE_5100_length_1023_cov_38.7785_potentialcontaminant AUGUSTUS mRNA 2 1003 . + . ID=g3059.t1;Parent=g3059;Name=g3059.t1 NODE_5100_length_1023_cov_38.7785_potentialcontaminant AUGUSTUS exon 2 1003 . + . ID=g3059.t1.exon1;Parent=g3059.t1 NODE_5100_length_1023_cov_38.7785_potentialcontaminant AUGUSTUS CDS 2 1003 . + 0 ID=cds.g3059.t1;Parent=g3059.t1 #PROT g3059.t1 g3059 YLTAIGDTIGTTATTSGFAWYNRALYLATVIGKLASTVDLTNVVASWDALASATQEYQLTIDEYPFAPPITTCKPLPFSQDSCSCSVVTRASFIQYYDASTATTITLSDRAQLGETGVAQVTFSQDQCSEARSISNYPFRAMSIRNEDPTFEQGVEAGTPAGHDEVEQLFYQFVAGQNLAKPAPIRPWRLISAPYEANADSSHAIAEQSVFKQAALYNPFVIVATGLPLTRAPVLTLMPNMGTPTLEDDPLTSREDGWDENVIQVSPSTADYIHTIAAYLDSIYPDNFPYSGIYAITSTPEEAALLNRSLQTYQLPEPIEWFNSTVTLQTSLI* # PASA_UPDATE: g1361.t1, single gene model update, valid-1, status:[pasa:asmbl_8364,status:12], valid-1 NODE_5926_length_680_cov_116.494 . gene 1 680 . - . ID=g1361;Name=g1361.t1 NODE_5926_length_680_cov_116.494 . mRNA 1 680 . - . ID=g1361.t1;Parent=g1361;Name=g1361.t1 NODE_5926_length_680_cov_116.494 . exon 1 680 . - . ID=g1361.t1.exon1;Parent=g1361.t1 NODE_5926_length_680_cov_116.494 . CDS 1 680 . - 0 ID=cds.g1361.t1;Parent=g1361.t1;5_prime_partial=true;3_prime_partial=true #PROT g1361.t1 g1361 CFRTLKLTTPTYGDLNHLVSATMSGITTCLRFPGQLNADLRKIAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEV # ORIGINAL: g3392.t1 original gene structure, not modified by PASA NODE_1803_length_9159_cov_41.8409 AUGUSTUS gene 1256 4585 . + . ID=g3392;Name=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS mRNA 1256 4585 . + . ID=g3392.t1;Parent=g3392;Name=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 1256 1918 . + . ID=g3392.t1.exon1;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 1256 1918 . + 0 ID=cds.g3392.t1;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 2140 2461 . + . ID=g3392.t1.exon2;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 2140 2461 . + 0 ID=cds.g3392.t1;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 3049 3579 . + . ID=g3392.t1.exon3;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 3049 3579 . + 2 ID=cds.g3392.t1;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 4015 4106 . + . ID=g3392.t1.exon4;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 4015 4106 . + 2 ID=cds.g3392.t1;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 4469 4585 . + . ID=g3392.t1.exon5;Parent=g3392.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 4469 4585 . + 0 ID=cds.g3392.t1;Parent=g3392.t1 #PROT g3392.t1 g3392 MAQVTAALRCVHSQTTPVTSVAYSPDGRIVASGGEDNTVRLWDVQTGNQIRTLSGHSRFVKSVAYSPDARVVASGSDDQTVRLWDAQTGTPIRTLSGHSDWVRSVAYSPDGRNVASGSYDTTVRLWDAQTGTPIRTLSGHSDWVRSVEYSPDGCIVASGSEDKTIMLWDVRTGKNTRTLSGHLNIVYSVAYSPDGLVVVSGSEDTTIQLWDAQTGGHIRTRIDGAVAVTAAVGAKAAVVEDDAIRQGSVDSILLLMRESQFDAIVQMACLKALGDVVNTDEVNSDAIAGKGQPSVRARSLQFNESFSHCRDGCSPPLIPGGSQSAASRLSTAATFAILCTKPFNDLTVRAARAASMCNATTSTSPARVAFGANFIRIVGSSISTELKFSVKLLENSPRLCERRQRTAVTQDRAAFTWMICHALRRTRLRTSSRRAPHVVSMECHEDYLSHQSRFVDRRLPLYLCADDDAELCVDFLDIDRRMRFEVIPGRRGYAYWCRKDGPQVVAAQENVFLAHAPHCLSGALVSVLVRALVLVLERAENKRFADVKRPKVDIVVNWRIENRWSASRTTRDCR* # ORIGINAL: g3393.t1 original gene structure, not modified by PASA NODE_1803_length_9159_cov_41.8409 AUGUSTUS gene 6373 8116 . + . ID=g3393;Name=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS mRNA 6373 8116 . + . ID=g3393.t1;Parent=g3393;Name=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 6373 7372 . + . ID=g3393.t1.exon1;Parent=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 6373 7372 . + 0 ID=cds.g3393.t1;Parent=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 7571 7703 . + . ID=g3393.t1.exon2;Parent=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 7571 7703 . + 2 ID=cds.g3393.t1;Parent=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 8020 8116 . + . ID=g3393.t1.exon3;Parent=g3393.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 8020 8116 . + 1 ID=cds.g3393.t1;Parent=g3393.t1 #PROT g3393.t1 g3393 MAARVLDLAATLCGHSKIVTSVAYSPNGRTVASGNEDNTVRLWDTKGNHIHSLSGHSSMVKSVAYSPDGRVVASGSEDKTVRLWDAQTGALIRTLGHSAWVDSVAYSPDGRVVASGSEDSAIRLWDVETGTHIRTLNGHENRVYSVAFSPNGRVVVSGSEDQTVRLWDAQTGKHMRTLSGPYLNWVTSVAYSPDGRNVASGSENSILELWDAHSGDSIRTLSGHSDSVSSVAYSPDGRIIASGSYDSTVSLWDAETGAHIRTLSGHSKWVTSVAYSPDGCTLASGSKDGTVRLWDCAQMPAVVDTRTISARDDHPSWAEASDNDDSAESLAEDDAGNIDLTNKKYAGGSRIDWLGEVEVQSHPNLPLNVIRSFEELNLRPELLRGIYALGFNKPSKFQGTALPMILLNP* # ORIGINAL: g3391.t1 original gene structure, not modified by PASA NODE_1803_length_9159_cov_41.8409 AUGUSTUS gene 182 547 . + . ID=g3391;Name=g3391.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS mRNA 182 547 . + . ID=g3391.t1;Parent=g3391;Name=g3391.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 182 250 . + . ID=g3391.t1.exon1;Parent=g3391.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 182 250 . + 0 ID=cds.g3391.t1;Parent=g3391.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS exon 395 547 . + . ID=g3391.t1.exon2;Parent=g3391.t1 NODE_1803_length_9159_cov_41.8409 AUGUSTUS CDS 395 547 . + 0 ID=cds.g3391.t1;Parent=g3391.t1 #PROT g3391.t1 g3391 VPKFLTENHYILDHVYPKIQIDLILVKGGFTPDTIEHLAEKLNIPVSFLFMRSPGPSFPYTYGQLHGVRLILP* # ORIGINAL: g13194.t1 original gene structure, not modified by PASA NODE_1406_length_11531_cov_41.757 AUGUSTUS gene 3602 5369 . + . ID=g13194;Name=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS mRNA 3602 5369 . + . ID=g13194.t1;Parent=g13194;Name=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 3602 3762 . + . ID=g13194.t1.exon1;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 3602 3762 . + 0 ID=cds.g13194.t1;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 3876 3901 . + . ID=g13194.t1.exon2;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 3876 3901 . + 1 ID=cds.g13194.t1;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 4369 4489 . + . ID=g13194.t1.exon3;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 4369 4489 . + 2 ID=cds.g13194.t1;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 4813 5063 . + . ID=g13194.t1.exon4;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 4813 5063 . + 1 ID=cds.g13194.t1;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 5227 5369 . + . ID=g13194.t1.exon5;Parent=g13194.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 5227 5369 . + 2 ID=cds.g13194.t1;Parent=g13194.t1 #PROT g13194.t1 g13194 MYALPVTQPSAAPARRESVSRKYKFFRRLINFRHMDFEFALWQMLYLIVSPRKVYRSIYFHKLSSVGFAIVYHVHFVAFVKFLLWVVFIDFIGTGVAIASLFSYVANRYLRTKGSVHAVDQTVEWFYAFDVHCNAFFPLLLILHVVQLFCMPVIRSSFEFTSLMLSNSLWFIALVYYFYITFLGYNALPFLEKTVIFLYPIAFFLVIYSISIVFGWNFSLLVFNFYYGLEQTP* # PASA_UPDATE: g13195.t1, single gene model update, valid-1, status:[pasa:asmbl_1487,status:3], valid-1 NODE_1406_length_11531_cov_41.757 . gene 6102 7904 . - . ID=g13195;Name=g13195.t1 NODE_1406_length_11531_cov_41.757 . mRNA 6102 7904 . - . ID=g13195.t1;Parent=g13195;Name=g13195.t1 NODE_1406_length_11531_cov_41.757 . five_prime_UTR 7855 7904 . - . ID=g13195.t1.utr5p1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . exon 7843 7904 . - . ID=g13195.t1.exon1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . CDS 7843 7854 . - 0 ID=cds.g13195.t1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . exon 7275 7403 . - . ID=g13195.t1.exon2;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . CDS 7275 7403 . - 0 ID=cds.g13195.t1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . exon 6783 6929 . - . ID=g13195.t1.exon3;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . CDS 6783 6929 . - 0 ID=cds.g13195.t1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . exon 6102 6461 . - . ID=g13195.t1.exon4;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . CDS 6270 6461 . - 0 ID=cds.g13195.t1;Parent=g13195.t1 NODE_1406_length_11531_cov_41.757 . three_prime_UTR 6102 6269 . - . ID=g13195.t1.utr3p1;Parent=g13195.t1 #PROT g13195.t1 g13195 MAEQTEKAFQKQAALFFNAKRVLGKKSENKELRYWRNIGLGFKTPKDAIEGTYVDKKCPFTGNVSIRGRILTGTVVSLKMKRTLVIRRDYLHYIKKYNRFEKRHKNLSAHLSPAFKDIDLGDSVVVGQCRPLSKTVRFNVVKVIKDRKAAKARKMFQKF* # PASA_UPDATE: g13193.t1, single gene model update, valid-1, status:[pasa:asmbl_1486,status:12], valid-1 NODE_1406_length_11531_cov_41.757 . gene 253 2859 . - . ID=g13193;Name=g13193.t1 NODE_1406_length_11531_cov_41.757 . mRNA 253 2859 . - . ID=g13193.t1;Parent=g13193;Name=g13193.t1 NODE_1406_length_11531_cov_41.757 . five_prime_UTR 2777 2859 . - . ID=g13193.t1.utr5p1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 2714 2859 . - . ID=g13193.t1.exon1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 2714 2776 . - 0 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 2442 2538 . - . ID=g13193.t1.exon2;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 2442 2538 . - 0 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 2042 2193 . - . ID=g13193.t1.exon3;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 2042 2193 . - 2 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 1398 1706 . - . ID=g13193.t1.exon4;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 1398 1706 . - 0 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 992 1078 . - . ID=g13193.t1.exon5;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 992 1078 . - 0 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 521 658 . - . ID=g13193.t1.exon6;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 521 658 . - 0 ID=cds.g13193.t1;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . exon 253 310 . - . ID=g13193.t1.exon7;Parent=g13193.t1 NODE_1406_length_11531_cov_41.757 . CDS 253 310 . - 0 ID=cds.g13193.t1;Parent=g13193.t1;3_prime_partial=true #PROT g13193.t1 g13193 MAGRFRQSKYRNAVAKTAKREAWYAEIQAGTPSTDADNIKASCKFLAFCWESIGGGQLCVIPIERVGKVGRDIPLLSAHGDYISDFEFSPFDDNLLVTGSNDTTVRVWHVPDGGFKENHSTPVATLSGHPKRVECLKFNPNADKVLAVASGDIVKIWNLESNTEIATLQHPDIVQSLSWKGDGSLLATTCKDNTIRVWDPRANKITTSGTAHEGTKGSRVTWLGDRAHILTTGFSKTRERQFAMWDHVDVSKPLTMQSLDSSNGILMPFYDDDTEMLFLAGKGDSTIRFYETTADKPYLHE # ORIGINAL: g13196.t1 original gene structure, not modified by PASA NODE_1406_length_11531_cov_41.757 AUGUSTUS gene 8778 10222 . + . ID=g13196;Name=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS mRNA 8778 10222 . + . ID=g13196.t1;Parent=g13196;Name=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 8778 9493 . + . ID=g13196.t1.exon1;Parent=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 8778 9493 . + 0 ID=cds.g13196.t1;Parent=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 9684 9765 . + . ID=g13196.t1.exon2;Parent=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 9684 9765 . + 1 ID=cds.g13196.t1;Parent=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS exon 10088 10222 . + . ID=g13196.t1.exon3;Parent=g13196.t1 NODE_1406_length_11531_cov_41.757 AUGUSTUS CDS 10088 10222 . + 0 ID=cds.g13196.t1;Parent=g13196.t1 #PROT g13196.t1 g13196 MLTGGDYVTLLAGQGNGDVGLLGFGSHAMNGEQLDLYGNAMMAQYPVPHPYNSASYWPDGSPMDPSWIAHQQALAGMPYTQQQCWINSSGLSNAFGVPAHVPLTEHYSQHAAIHNRSASKRRAEDDVDAFERKSKRFAPDFVAKRLHSLRLETDSEEEEDQIRKIRILSTMDDCVDTYGSDAVVDHDLRLSDEESSLDGSSSSDEEMGDGESVRLKFLARMSLTKLDPIIPPAMMRSSSADNAMALVLYQSPQEFIEKNVLKAARKAQTSEAANNNNNNNNNNNNNNNNNKDAEEKLSLSHCDYMDMMEM* # PASA_UPDATE: g12177.t1, single gene model update, valid-1, status:[pasa:asmbl_6336,status:12], valid-1 NODE_3634_length_3075_cov_38.4103 . gene 228 2039 . + . ID=g12177;Name=g12177.t1 NODE_3634_length_3075_cov_38.4103 . mRNA 228 2039 . + . ID=g12177.t1;Parent=g12177;Name=g12177.t1 NODE_3634_length_3075_cov_38.4103 . five_prime_UTR 228 228 . + . ID=g12177.t1.utr5p1;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . exon 228 341 . + . ID=g12177.t1.exon1;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . CDS 229 341 . + 0 ID=cds.g12177.t1;Parent=g12177.t1;5_prime_partial=true NODE_3634_length_3075_cov_38.4103 . exon 706 922 . + . ID=g12177.t1.exon2;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . CDS 706 922 . + 1 ID=cds.g12177.t1;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . exon 1270 1462 . + . ID=g12177.t1.exon3;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . CDS 1270 1462 . + 0 ID=cds.g12177.t1;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . exon 1712 2039 . + . ID=g12177.t1.exon4;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . CDS 1712 1842 . + 2 ID=cds.g12177.t1;Parent=g12177.t1 NODE_3634_length_3075_cov_38.4103 . three_prime_UTR 1843 2039 . + . ID=g12177.t1.utr3p1;Parent=g12177.t1 #PROT g12177.t1 g12177 VFLAEYAGPLFVYLLFAARPALIYGEAASKTPLTHVQQTAAACWAFHYAKRVLETIFVHRFSHGTMPIFNLFKNCSYYWGFAAFIAYFVNHPLFTAPGEDQVKIGLALFAFAELGNFSIHIALRNLRPAGSKVRRIPFAGANPFTWLFGLVSCPNYTYEAIAWTGFSIMTQSLSAVIFTIAGLVQMSVWALGKHRNYKKEFGNEYPRGRKAILPFLV* # PASA_UPDATE: g13979.t1, single gene model update, valid-1, status:[pasa:asmbl_5537,status:12], valid-1 NODE_3088_length_4353_cov_42.428 . gene 2156 3446 . + . ID=g13979;Name=g13979.t1 NODE_3088_length_4353_cov_42.428 . mRNA 2156 3446 . + . ID=g13979.t1;Parent=g13979;Name=g13979.t1 NODE_3088_length_4353_cov_42.428 . exon 2156 3446 . + . ID=g13979.t1.exon1;Parent=g13979.t1 NODE_3088_length_4353_cov_42.428 . CDS 2156 3280 . + 0 ID=cds.g13979.t1;Parent=g13979.t1 NODE_3088_length_4353_cov_42.428 . three_prime_UTR 3281 3446 . + . ID=g13979.t1.utr3p1;Parent=g13979.t1 #PROT g13979.t1 g13979 MIRALVRGAAVHPRHLPDILARHRVRTLSSLSPDIRKARHSVSTNLFVSSNGHVLPLKSLPTCITPHTSVSSSGHVMRYSVGGQNSDIPGKNPGCPSPDDAHSPRPKATASASAASTPDEENSPLEKVPEPSEIAERFPWHAGRRFSTAYPDDGGIVDSIRLGIANLIGRRTFGLTVTDPTYWDSDFRDGALQAFKSVTDLISRRDVEELVPLLGPEVLRRFRDSFLWMAKRGITLTLKVNPDSVTLPRLRRLRVIVGNPAVMRPGSMHVDDFFGHKLYIDASWMRNQNDERVPTNALSFRAVRSGVRLQVDTAIECTELFNLRVGDQILLGSDEEQTALHRFTFEAFVSEDHGITDLEWRVADIDRAVNVIER* # ORIGINAL: g13980.t1 original gene structure, not modified by PASA NODE_3088_length_4353_cov_42.428 AUGUSTUS gene 3747 4285 . - . ID=g13980;Name=g13980.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS mRNA 3747 4285 . - . ID=g13980.t1;Parent=g13980;Name=g13980.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS exon 3747 4285 . - . ID=g13980.t1.exon1;Parent=g13980.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS CDS 3747 4285 . - 2 ID=cds.g13980.t1;Parent=g13980.t1 #PROT g13980.t1 g13980 GKGVRDITNAVRKLVLSKDPELEEKRALQIAQQIIRDVVKETASKEERSASFHGDASSSVGASLGNSTDDLSGIDSSRGRSPSTGRSIDVSRVQTRSPSPTTQRTDKSTGVPVIVTAPSPRPARTASTSSMESSGNKTATAGVTTTATPAKQQQPQQKARPASTPQPVAIRFDEADAI* # ORIGINAL: g13978.t1 original gene structure, not modified by PASA NODE_3088_length_4353_cov_42.428 AUGUSTUS gene 77 1294 . - . ID=g13978;Name=g13978.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS mRNA 77 1294 . - . ID=g13978.t1;Parent=g13978;Name=g13978.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS exon 77 1294 . - . ID=g13978.t1.exon1;Parent=g13978.t1 NODE_3088_length_4353_cov_42.428 AUGUSTUS CDS 77 1294 . - 0 ID=cds.g13978.t1;Parent=g13978.t1 #PROT g13978.t1 g13978 MAQLRPREEDLRRWASATQRIAGVCVSPQSRLDALSAQVVGNALDDANAISFPLPSLTTEECASVLISLCRLVTSSSSALSATDLTASKVLQLAASLFNRQGIRPQQPECVDLVLDLATSRLRAKHHWLQADALRALGAVAYDHAAACVRYYDTLFGEGRGVVMALARTDNTDAEIRRLAITCIGNVCANAPPQRLSVHVGGILSTLVTNLEGLAGSAPEDASMGRLLCATFKALQSAIAAARTVPALTSVLSAIKTHMFHGLGAIASASLGESSFGVARETNSKYDILAISGSKFRGSGLSASENPSDGNVSGSPSGRTTRSHSQSHTAGHSVGLSQSLTHGQLGGRGRSSSRHTYANSGVNAGNDGGDGEWATPVLRLSSDSEVSDMGDGGAVKNRYCEASLR* # ORIGINAL: g2715.t1 original gene structure, not modified by PASA NODE_10183_length_312_cov_23.097_potentialcontaminant AUGUSTUS gene 1 217 . - . ID=g2715;Name=g2715.t1 NODE_10183_length_312_cov_23.097_potentialcontaminant AUGUSTUS mRNA 1 217 . - . ID=g2715.t1;Parent=g2715;Name=g2715.t1 NODE_10183_length_312_cov_23.097_potentialcontaminant AUGUSTUS exon 1 217 . - . ID=g2715.t1.exon1;Parent=g2715.t1 NODE_10183_length_312_cov_23.097_potentialcontaminant AUGUSTUS CDS 1 217 . - 0 ID=cds.g2715.t1;Parent=g2715.t1 #PROT g2715.t1 g2715 MSYGGNLELFGRKGIAAQYFTDLELPQRLAQVAGGCETPDDQYSSESWRSSDRRHGQAQQCSRWIALWLGRR # ORIGINAL: g13450.t1 original gene structure, not modified by PASA NODE_4518_length_1513_cov_38.9305 AUGUSTUS gene 74 1111 . - . ID=g13450;Name=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS mRNA 74 1111 . - . ID=g13450.t1;Parent=g13450;Name=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS exon 1017 1111 . - . ID=g13450.t1.exon1;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS CDS 1017 1111 . - 0 ID=cds.g13450.t1;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS exon 689 869 . - . ID=g13450.t1.exon2;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS CDS 689 869 . - 1 ID=cds.g13450.t1;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS exon 368 502 . - . ID=g13450.t1.exon3;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS CDS 368 502 . - 0 ID=cds.g13450.t1;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS exon 74 211 . - . ID=g13450.t1.exon4;Parent=g13450.t1 NODE_4518_length_1513_cov_38.9305 AUGUSTUS CDS 74 211 . - 0 ID=cds.g13450.t1;Parent=g13450.t1 #PROT g13450.t1 g13450 MLNAASRLKGQNDMKKYEKARELKKVIEKIRVTYTEELRDKQMAVRQRATALHLIDRLALRVGNEKDKDEEADTVGCCNLRYEHVELEEPNKVHFDFLGKDSIRYENTIEVEARVFKNLQIFKKNKAEGDLLFDRLTTQSLNKHLQTLMDGLSAKVFRTYNASSTLQVQLNALCEEGATVSEK # ORIGINAL: g2891.t1 original gene structure, not modified by PASA NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS gene 265 840 . + . ID=g2891;Name=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS mRNA 265 840 . + . ID=g2891.t1;Parent=g2891;Name=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS exon 265 337 . + . ID=g2891.t1.exon1;Parent=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS CDS 265 337 . + 0 ID=cds.g2891.t1;Parent=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS exon 492 765 . + . ID=g2891.t1.exon2;Parent=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS CDS 492 765 . + 2 ID=cds.g2891.t1;Parent=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS exon 837 840 . + . ID=g2891.t1.exon3;Parent=g2891.t1 NODE_5453_length_844_cov_53.9012_potentialcontaminant AUGUSTUS CDS 837 840 . + 1 ID=cds.g2891.t1;Parent=g2891.t1 #PROT g2891.t1 g2891 MVAEADLVNVLPATGLAPLALVFTAVLLINGLYSRLTSCLLRIRILNGQAFVTTRDLGSHGLERAQFIREWHEQTTDVYNRARWIEAGLYFFLMATALLAVASVLQGWTPVSASLA* # ORIGINAL: g13682.t1 original gene structure, not modified by PASA NODE_3174_length_4105_cov_55.5076 AUGUSTUS gene 1 261 . - . ID=g13682;Name=g13682.t1 NODE_3174_length_4105_cov_55.5076 AUGUSTUS mRNA 1 261 . - . ID=g13682.t1;Parent=g13682;Name=g13682.t1 NODE_3174_length_4105_cov_55.5076 AUGUSTUS exon 1 261 . - . ID=g13682.t1.exon1;Parent=g13682.t1 NODE_3174_length_4105_cov_55.5076 AUGUSTUS CDS 1 261 . - 0 ID=cds.g13682.t1;Parent=g13682.t1 #PROT g13682.t1 g13682 MEVEMNSPKVTVDIETGVDEKKPKRCCGGLRDRWAALPTWQKVAIILTIIAIAVVVTVIVILYGLAPLIAQDNVNNSRFVMETVVMK # PASA_UPDATE: g13683.t1, single gene model update, valid-1, status:[pasa:asmbl_5670,status:12],[pasa:asmbl_5671,status:12], valid-1 NODE_3174_length_4105_cov_55.5076 . gene 2145 4021 . + . ID=g13683;Name=g13683.t1 NODE_3174_length_4105_cov_55.5076 . mRNA 2145 4021 . + . ID=g13683.t1;Parent=g13683;Name=g13683.t1 NODE_3174_length_4105_cov_55.5076 . five_prime_UTR 2145 2214 . + . ID=g13683.t1.utr5p1;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . exon 2145 3241 . + . ID=g13683.t1.exon1;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . CDS 2215 3241 . + 0 ID=cds.g13683.t1;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . exon 3407 3589 . + . ID=g13683.t1.exon2;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . CDS 3407 3589 . + 2 ID=cds.g13683.t1;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . exon 3745 4021 . + . ID=g13683.t1.exon3;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . CDS 3745 3890 . + 2 ID=cds.g13683.t1;Parent=g13683.t1 NODE_3174_length_4105_cov_55.5076 . three_prime_UTR 3891 4021 . + . ID=g13683.t1.utr3p1;Parent=g13683.t1 #PROT g13683.t1 g13683 MGAAPVEIERKIYFAKLASLALTLFAFVFIITSVAGPATTLPWLQVDNADLFDMVILSGSPDSTGSGSTGGFPFDPSNFPTGDGDGVFPGGSNFDPANFPTGGGDMNPNAGAGNMFPNGNNWPDNNNNNNNNNNNNWPYNNNNGNSGWRTGSNNNDGISDESEGAGTGDNTDHSGWSGTTDDSNSDEWNGSYDEKRRRAVVPARKPLRRSSFDPQGILGKFGSLIPSNIVPADIADDAGDAAGAEDSGTTIGSSNAYIRLNLFEGCTDGVGCSKLKSIVSRTFATNCNLSLCFGVMAIVASFACVVTSGYVAFKLRGGSSQEGTLLALRTPLLVDFALANAAGAFGIVAFAIFRGNLIVRAALGYNFHLGAGFALCVVGASLLVVAGFTSGLALAWHKARIACGDAVRPSQYPGGRSEDDVALLVLDDDDMALVARLAANGSNSAAGAQQC* # PASA_UPDATE: g3271.t1, single gene model update, valid-1, status:[pasa:asmbl_6123,status:12], valid-1 NODE_3487_length_3351_cov_34.8999 . gene 308 2033 . - . ID=g3271;Name=g3271.t1 NODE_3487_length_3351_cov_34.8999 . mRNA 308 2033 . - . ID=g3271.t1;Parent=g3271;Name=g3271.t1 NODE_3487_length_3351_cov_34.8999 . five_prime_UTR 2015 2033 . - . ID=g3271.t1.utr5p1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . exon 1777 2033 . - . ID=g3271.t1.exon1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . CDS 1777 2014 . - 0 ID=cds.g3271.t1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . exon 1511 1545 . - . ID=g3271.t1.exon2;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . CDS 1511 1545 . - 2 ID=cds.g3271.t1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . exon 1147 1189 . - . ID=g3271.t1.exon3;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . CDS 1147 1189 . - 0 ID=cds.g3271.t1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . exon 814 867 . - . ID=g3271.t1.exon4;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . CDS 814 867 . - 2 ID=cds.g3271.t1;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . exon 308 554 . - . ID=g3271.t1.exon5;Parent=g3271.t1 NODE_3487_length_3351_cov_34.8999 . CDS 308 554 . - 2 ID=cds.g3271.t1;Parent=g3271.t1;3_prime_partial=true #PROT g3271.t1 g3271 MSGGHKHCICFVFIALTITIIERGEMLRQLLSTLATRIAARGSVRAHFDCANFSTLSTVAKMSGYVRQDSAFGNTDEPIDERMKFYEGQYASFLHEDMCWMVRLDGHKFSKYTAGFNKPFDTRINEALVLTTVDLCRNFSPTFAFCQSDEITLVFPKLTRKKEDSSCLPFAGRVSKILSLAASYCSVRFYYHMSKQKYDPETEAK # PASA_UPDATE: g8244.t1, single gene model update, valid-1, status:[pasa:asmbl_4582,status:12], valid-1 NODE_2578_length_5804_cov_39.7946 . gene 3073 5609 . + . ID=g8244;Name=g8244.t1 NODE_2578_length_5804_cov_39.7946 . mRNA 3073 5609 . + . ID=g8244.t1;Parent=g8244;Name=g8244.t1 NODE_2578_length_5804_cov_39.7946 . exon 3073 3197 . + . ID=g8244.t1.exon1;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . CDS 3073 3197 . + 0 ID=cds.g8244.t1;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . exon 3424 3588 . + . ID=g8244.t1.exon2;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . CDS 3424 3588 . + 1 ID=cds.g8244.t1;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . exon 3695 3820 . + . ID=g8244.t1.exon3;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . CDS 3695 3820 . + 1 ID=cds.g8244.t1;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . exon 4159 5609 . + . ID=g8244.t1.exon4;Parent=g8244.t1 NODE_2578_length_5804_cov_39.7946 . CDS 4159 5609 . + 1 ID=cds.g8244.t1;Parent=g8244.t1;3_prime_partial=true #PROT g8244.t1 g8244 MAGMAAQLHPDNGEQQELSFIDAGVTSLRTLGLSTGAYAGIISLVLHCNYINKIEGLDALPSLRRLDLSSNRISRIEGLDSLFNLRSLNLASNKITNIDGVGALGRLETLNLSYNSIETLSGIALLSGPDHSLRTLDVRGNRITSLGEFAHLSHCPYLSFLSVSTGASASGVARSDPSNPVCADPNYRPIAFGHIASLASLDGVDRYGRAVQGDVADMEDALASYMELLGPSDAHSSENDERGDGMYRERRNGRRPSSATGVAVAATAPVRGDRRAADADTDADRRRNVRIQGAHSSEARDEGVQTSVTAERWSRAYDNGDASITSPNASNASARHVSVGNQTTSQTDEAVQTDASPPATAQSRDMRGSDEPLSSSASAAASQHPSTAHAQPQPHSHSRIDDALDKFHNRSRNPYDYGVEEPLDDSPQKALPSTSGASAVEPRGVKKTAARGRSAPTAKSPAKSSTTNATRVGMGGVRRDGTTTVEASVAARAEVAKDVAERERLKRDAAGVFSDVRPSLLPVPSHASTAAAAAAGGAGVRKSGGVFVKREYPIPSSRVNSGVSDGGRRQVRARDLPSAPEDDLEARVTDSLDVMVGSVSRERQAEADTLSVESEAEDERAY # PASA_UPDATE: g8243.t1, single gene model update, valid-1, status:[pasa:asmbl_4581,status:3], valid-1 NODE_2578_length_5804_cov_39.7946 . gene 386 2828 . + . ID=g8243;Name=g8243.t1 NODE_2578_length_5804_cov_39.7946 . mRNA 386 2828 . + . ID=g8243.t1;Parent=g8243;Name=g8243.t1 NODE_2578_length_5804_cov_39.7946 . five_prime_UTR 386 752 . + . ID=g8243.t1.utr5p1;Parent=g8243.t1 NODE_2578_length_5804_cov_39.7946 . exon 386 1711 . + . ID=g8243.t1.exon1;Parent=g8243.t1 NODE_2578_length_5804_cov_39.7946 . CDS 753 1711 . + 0 ID=cds.g8243.t1;Parent=g8243.t1 NODE_2578_length_5804_cov_39.7946 . exon 2145 2828 . + . ID=g8243.t1.exon2;Parent=g8243.t1 NODE_2578_length_5804_cov_39.7946 . CDS 2145 2742 . + 1 ID=cds.g8243.t1;Parent=g8243.t1 NODE_2578_length_5804_cov_39.7946 . three_prime_UTR 2743 2828 . + . ID=g8243.t1.utr3p1;Parent=g8243.t1 #PROT g8243.t1 g8243 MEHISPLEPLLGSGGADQQHSWAGIERQQYLASVVNASGQRPRQSRRTSDFDEMEVTDDASRFLEEDGGSFLHITPLSVSKWERIGLYALLVCMVGIAFAYVGYSMHKLINGSSFASSSIIVEPVEQIESIRFIMVRPLPASASPMCVIPPGGAVPLPIVSTRMSSLKDGSYWPQPSDTSAPYPASVCMPPDGHSESHTDPPGAPSTLIQPLCVSVYCVATQKPFLPFGWRSESVRAQVCEIKLGPWATSTASEIDIYIPFAWMANDTSIACPLNQLRFMSDDPEGLPSRTAVETTYLTARAEDDSSSLEEFVESKEFDRFIISTASQVRVGCAATGGTPWTWRWEGPLKNFVTLLRWLPGDPITSSVSILYSLTLDATSSWTNILGISLSQVIRNAQVRLQPPTVGFIHPSCDRAYASDWQVTSPPKYKYLPPNTTYPVDSLLMMLDLSADGLLRTQKTRLVMSFTGIDMLVGLMSVLGGMSTLLSLLYPIIQKGESARFFRFGKRKDRFHSLLKHQ* # ORIGINAL: g13237.t1 original gene structure, not modified by PASA NODE_5599_length_785_cov_31.4577 AUGUSTUS gene 129 563 . - . ID=g13237;Name=g13237.t1 NODE_5599_length_785_cov_31.4577 AUGUSTUS mRNA 129 563 . - . ID=g13237.t1;Parent=g13237;Name=g13237.t1 NODE_5599_length_785_cov_31.4577 AUGUSTUS exon 371 563 . - . ID=g13237.t1.exon1;Parent=g13237.t1 NODE_5599_length_785_cov_31.4577 AUGUSTUS CDS 371 563 . - 0 ID=cds.g13237.t1;Parent=g13237.t1 NODE_5599_length_785_cov_31.4577 AUGUSTUS exon 129 208 . - . ID=g13237.t1.exon2;Parent=g13237.t1 NODE_5599_length_785_cov_31.4577 AUGUSTUS CDS 129 208 . - 2 ID=cds.g13237.t1;Parent=g13237.t1 #PROT g13237.t1 g13237 MNVVCRQVVPEGTPDVEFVQSGYILRADLSHPATLFFSLENTASQDKDSFNLTKGTNKFCLQKPGVYNLTPRSNCHRFEKAVYQFDTSKPQ # ORIGINAL: g9675.t1 original gene structure, not modified by PASA NODE_618_length_20108_cov_49.9677 AUGUSTUS gene 17450 20023 . + . ID=g9675;Name=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS mRNA 17450 20023 . + . ID=g9675.t1;Parent=g9675;Name=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 17450 17632 . + . ID=g9675.t1.exon1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 17450 17632 . + 0 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 17775 17900 . + . ID=g9675.t1.exon2;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 17775 17900 . + 0 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 18024 18202 . + . ID=g9675.t1.exon3;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 18024 18202 . + 0 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 18374 18870 . + . ID=g9675.t1.exon4;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 18374 18870 . + 1 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 19118 19239 . + . ID=g9675.t1.exon5;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 19118 19239 . + 2 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 19490 19597 . + . ID=g9675.t1.exon6;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 19490 19597 . + 0 ID=cds.g9675.t1;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 19865 20023 . + . ID=g9675.t1.exon7;Parent=g9675.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 19865 20023 . + 0 ID=cds.g9675.t1;Parent=g9675.t1 #PROT g9675.t1 g9675 MAARVSHTLDTGLFPSYSFVDTQHEKPLIDVGSVRQCVVRSADICQQTIRRIDRLRRKITKDLQREGCPEYGPDDRRLGIYSLAFNQFAADLSVRRDLFIEIKNAYDEFIRAHREEQTEANALLSRIRTLEAENLNDAAIRQEQRRAAEIEQKIQTMTEDQERINVMINHARSRRKKGMRTPAPYTQQDGTVVDDSPRWPTGTPMLRRRSSIGGMSIASGQGPLMGQLGNPTPQITSGSLKRRMTLINNLVMQQQQQQQQQQQSSSSGAQQSPPPTAGPQPQQHTQLLMPTHRRSRGYSIFSGDSDGAESENLNVGARADAGLKSPVNGSDAGSDEEEEEEVVFIPELNFERKERPVTYEDEIRLLKEELGKLKSFIANKERVLEALMPPPPTPQPLLDKYYAAQKRFDEVVAVCDVAESERNSVVRHMQALYKRVNDGNWRIVAARKEMRVLIENGA # ORIGINAL: g9671.t1 original gene structure, not modified by PASA NODE_618_length_20108_cov_49.9677 AUGUSTUS gene 90 1694 . - . ID=g9671;Name=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS mRNA 90 1694 . - . ID=g9671.t1;Parent=g9671;Name=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 1618 1694 . - . ID=g9671.t1.exon1;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 1618 1694 . - 0 ID=cds.g9671.t1;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 1024 1232 . - . ID=g9671.t1.exon2;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 1024 1232 . - 1 ID=cds.g9671.t1;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 586 716 . - . ID=g9671.t1.exon3;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 586 716 . - 2 ID=cds.g9671.t1;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 90 406 . - . ID=g9671.t1.exon4;Parent=g9671.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 90 406 . - 0 ID=cds.g9671.t1;Parent=g9671.t1 #PROT g9671.t1 g9671 MGEKSECRLIVSVNDLRQFDADLAKRLMNTPGEVLPVFDIALQEYVSQNNPELSKAHAEFYVGIEGSFGAHHLTPRGLSARFLGSLVLIEGIVTKCSLVRPKLVTSVHYCRETKKTETHHHRDQTSFLGPPTGNTYAKTDADGNPLETEFGLSRYVDHQTITMQEMPESAPAGQLPRSVDIILDSDLADKVKPGDRVQMVGVYRALSSKSGNATTAVFKTVVIANNVRVLGKEVLQPVLSDVDI # ORIGINAL: g9673.t1 original gene structure, not modified by PASA NODE_618_length_20108_cov_49.9677 AUGUSTUS gene 5777 10508 . - . ID=g9673;Name=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS mRNA 5777 10508 . - . ID=g9673.t1;Parent=g9673;Name=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 8824 10508 . - . ID=g9673.t1.exon1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 8824 10508 . - 0 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 8434 8585 . - . ID=g9673.t1.exon2;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 8434 8585 . - 1 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 7785 8247 . - . ID=g9673.t1.exon3;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 7785 8247 . - 2 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 7483 7646 . - . ID=g9673.t1.exon4;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 7483 7646 . - 1 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 7189 7310 . - . ID=g9673.t1.exon5;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 7189 7310 . - 2 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 6830 6968 . - . ID=g9673.t1.exon6;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 6830 6968 . - 0 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 6457 6654 . - . ID=g9673.t1.exon7;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 6457 6654 . - 2 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 6123 6253 . - . ID=g9673.t1.exon8;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 6123 6253 . - 2 ID=cds.g9673.t1;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 5777 5920 . - . ID=g9673.t1.exon9;Parent=g9673.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 5777 5920 . - 0 ID=cds.g9673.t1;Parent=g9673.t1 #PROT g9673.t1 g9673 MRRFLIAIIVAAIACVGVAIAGDDVIFPGTPTGCHSCSCYDCKASNSTTDPACFAGGTCPDSGGACTCPEGFSNYACAQISCLRDYRGKNWPPFVLHKPDRLETDYHLCQCADGYQGHLCNVCIPKGNQTGTCLTNSDDTAGRCDSTAFTQKRKSFSCEVKNSDAIPLQEQAGASVTMTTYFDGSLAPTDNVVHFQFWSRWKTDDGTQQPGLHLLFACNATGCQQSVDSTGSVSYTCAESGCLAFCDTRTLSCSNLLSALLTQVGTDPTAKGITVKCSRDGTTCEIHEKAIDDMWGGIILGCTAGECVVGDVPPPGPDPTPPPPKSRDFPGAIVGLVCVGVVYVSLFVGMHFYVRSTKAGYRSLMEDSGAGSAGKKKRVDGRHLYEQVSSHDSLADLDRAQSPVPTTGAAGAADGWRGGSTDSTGTAGATVDAYFGGARAYELGHVPSTITFKDMTYIVKDKVLLRGVSGIVNPGALFAVMGPSGAGKSTILDILSLRNKRGKVSGEILVNGNAPQSQFRRLVGFVDQEDTLMGTLTVRESLTFSAMLRLPASVSLVDKARRVESVMSELKIDRIADSRIGTTLARGISGGEKRRVSIAMELVTAPSVLFLDEPTSGLDSYNAHVVIKCLKEMAVQTGTAVALSVHQPRSHIFHMFDTLMLLSQGRTLYHGPSDRAVEYFSMLGYRCTHDANPADFVIDLAVSPDKLPLESSLGVQCELASLDPEDNESEDPLAASVCRRQRIESLADHFAGSPLNQSLMSTIEEYTNKRDLHSVNDWRRRSKHAPGFLRQFALLSSRMVLNLQRNPFLLFGHLITSVLMGVIVGVLYFQIPMNDLEAIQNRMGALLIMCAFLAFGSLSSLELFWAERAIYVHERANRFYWPSSYFVSKVGFDFVPLRVFPPILMGAIAYYMMGLRSDGNHFLIYLAILVLINVTASSVCLIVGVLVDRMATGNLVASLFMLASLMLTNIFNNPKSMASYVAWLPYVSFFNYGYEALCINELKGVLFINIAFEGAQTNVMGDVILDKLGFSVSSLKRDILVLTAYCSGCLIIAYVCLKIFVRQTK* # ORIGINAL: g9674.t1 original gene structure, not modified by PASA NODE_618_length_20108_cov_49.9677 AUGUSTUS gene 12684 16357 . + . ID=g9674;Name=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS mRNA 12684 16357 . + . ID=g9674.t1;Parent=g9674;Name=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 12684 12848 . + . ID=g9674.t1.exon1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 12684 12848 . + 0 ID=cds.g9674.t1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 13022 14044 . + . ID=g9674.t1.exon2;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 13022 14044 . + 0 ID=cds.g9674.t1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 14263 15225 . + . ID=g9674.t1.exon3;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 14263 15225 . + 0 ID=cds.g9674.t1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 15368 15555 . + . ID=g9674.t1.exon4;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 15368 15555 . + 0 ID=cds.g9674.t1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 15739 15853 . + . ID=g9674.t1.exon5;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 15739 15853 . + 1 ID=cds.g9674.t1;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 16046 16357 . + . ID=g9674.t1.exon6;Parent=g9674.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 16046 16357 . + 0 ID=cds.g9674.t1;Parent=g9674.t1 #PROT g9674.t1 g9674 MGVLVSTNRPPLEMFHREETSSMDLSFQQLRTFPPRLFRDYQKLLWLNVSENYLRRIPPEIVKLEALHTLRAAGNELNSLPDQLTRLGALTCLDIGRNRFTHVPQPLVDSKVLKELNLQNNTIGGDFPLPYSNPFNLSKLNVSFNTISALSVPPSIPVEFLVELDISHNRLEHLPASFGHLRHLERLWAMHNGLKALPASFSELRSLVYVNLEANELADVSVVFTLPRLDGVHLDDNNIVSLPQASRVESTELKDLSICNNKLTAIPPNLPFDNIQSVLLSGNEITGPESNFSSMSALTHLDMSNNKLKMAPRMPAAFSRLRLLSLYHNEIEKIEDDYFTNFQSLIELNLSDNRLSAFTSFDMKVAFYCEYLDLSGNMLTELSPQIIKLKSLLILQVARNRLNALPAEACKLPRLKILNCFDNNISSFPSEFGTMRSIEEVSVGYNSEDIVLPDDLSALVKLKLIYIAGTKMTEIPPSLFSLVKLQDLYITNSRIATVPAGVQSLVNLRSLVLTGNNITRMPFLGSLPHLQELNLAYNHIDELVPDWFVEMGRVALEDLDLSHNKISTIPVTIRHLRLLLKLKLASNLLTTLPADMRQMSELRMINLEHNPIDVQSINKKLMMKCVFWPESGGSSLSDISIGMSEMRGRRLDQEDSIVTIESFVLGSSLYCVFDGHGGTQSAEHASQTFPRMLADRLLAKVEPKQALAESFTELSDQLKAMRVESGTTACVVLIINKTVYAANCGDARAVLSERDGSIVKVDRLTYDHRPTAKDEYHRIRNLGGFFVDGRVCGSLAVTRSLGDLDTQPYVTYEPYISEFKLNKNHDFVILACDGVWDVLTDERAVELLHIEFDRLLALRTPPSVIAGVCAIKLRDYTYMSGSGDNISAIVVPLINYNAHHHNANAAARVKATSDSVMVDSL* # ORIGINAL: g9672.t1 original gene structure, not modified by PASA NODE_618_length_20108_cov_49.9677 AUGUSTUS gene 3117 4038 . - . ID=g9672;Name=g9672.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS mRNA 3117 4038 . - . ID=g9672.t1;Parent=g9672;Name=g9672.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 3650 4038 . - . ID=g9672.t1.exon1;Parent=g9672.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 3650 4038 . - 0 ID=cds.g9672.t1;Parent=g9672.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS exon 3117 3495 . - . ID=g9672.t1.exon2;Parent=g9672.t1 NODE_618_length_20108_cov_49.9677 AUGUSTUS CDS 3117 3495 . - 1 ID=cds.g9672.t1;Parent=g9672.t1 #PROT g9672.t1 g9672 MASCILPFGFTPSAAFAPSGVMDAFNPFGLPYIDPAWFSSAAAALAAAGQSQAQAFLAASASNEAKVAAANAASAATAAAEFDFFKDLVNFDSVTNNDSSEGTSETSSQSGKSGKTAANRATPYSRRSSSSRPVATLPEAELNARRKKEREAKARSRQRQKERISSLEKANTDLESDNSQLEEKLRALQAELSYLKHVLSLVEAKSDGVDSGKGGKGTSIEDVAMAAVSAGLSSSSPAPAIVPTGASAHSMVDCQ* # PASA_UPDATE: g373.t1, single gene model update, valid-1, status:[pasa:asmbl_1408,status:12], valid-1 NODE_1380_length_11680_cov_39.3951 . gene 2086 5929 . - . ID=g373;Name=g373.t1 NODE_1380_length_11680_cov_39.3951 . mRNA 2086 5929 . - . ID=g373.t1;Parent=g373;Name=g373.t1 NODE_1380_length_11680_cov_39.3951 . exon 5861 5929 . - . ID=g373.t1.exon1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . CDS 5861 5929 . - 0 ID=cds.g373.t1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . exon 5508 5627 . - . ID=g373.t1.exon2;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . CDS 5508 5627 . - 0 ID=cds.g373.t1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . exon 4296 5366 . - . ID=g373.t1.exon3;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . CDS 4296 5366 . - 0 ID=cds.g373.t1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . exon 3758 4141 . - . ID=g373.t1.exon4;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . CDS 3758 4141 . - 0 ID=cds.g373.t1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . exon 2086 3619 . - . ID=g373.t1.exon5;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . CDS 2303 3619 . - 0 ID=cds.g373.t1;Parent=g373.t1 NODE_1380_length_11680_cov_39.3951 . three_prime_UTR 2086 2302 . - . ID=g373.t1.utr3p1;Parent=g373.t1 #PROT g373.t1 g373 MDDFDVAAVPAFANYENQKLDKEVKDKERLLMAIEAEIEENSERVVVMNDHLKNVQQELLHTQAIWNAKSKEIDTEDHLKQLAEREEGRLKNEMRRIQTEVVELQDKINVIQNSIFKGNQRLDTMKAQMNMDQEELELWAQKARQKEEDALTLMRYARADETKIKELSLQIERLTHEVSRAKKDLDAEVTETQSAHVELEKSGVAFRQIHQERQELIRQWEAAIEQMQKRDAEIQMCSAEFARLKQDIKKREEEIKERQRFLAQEVETNHETERKIATAERLAGKLRQDHMDAESALMQFQDEVEALRSTLGKTSADLSSRRAEVSQLRNEVTDKKRRLDLSQKQLLVAKQQLQEAVGSALTMEEKAKKLEEIHRAEEARVNEISRELRHLKDSHFKKSQEVFALKQDETNLLHEIQGTQAASKNLTSKIHKLDAETLKQQELIYSQEFQLQQLERKIARLQGERTDEEERAMKARIEELTKNLEEQTATHTLLSTQLKRLQDDIRHAKRELEKASTEKETLSAKIGELTLHNDSASRELKKLVQSKQSMMVDENVIKLELRRLRQMLNVKADEVMTLEKRRLQLRQAMEERMGEINAHKDLLRAQLRDSEEQRHSASIELRDRLQRVDKLKKKYEIIVTSMAPEDGAEDKSQAYFLIRAAQQKEELQQQGDDLDGKIRKAEKEIRALENTLRLMNDRNDQYRRTFQKADVYGKESEQLSVLEEQYRGAMDKFKSKRREIKELQEELQSLEHTLGSLTQEESHHLTRLDDLETRLAMLAKDLEDQKGKKERASKVVAKLCADLRQARGVGFDQETPEERDFRLKELRQFNAQVIERISKVADEHPEISGTVEMLYEQAGIPKNAATSRSSMANIGKSDSRGSSVASTRPSSAASSVSAVSQALSAASSRTRALAPGRTVAPKVMGFAPSQPASTVQSTTNGQSRPQSRPLSNSSTTAGARTVPGKPSNPTSRTSSRPTSASSTSRR* # PASA_UPDATE: g374.t1, single gene model update, valid-1, status:[pasa:asmbl_1410,status:12], valid-1 NODE_1380_length_11680_cov_39.3951 . gene 6735 8953 . - . ID=g374;Name=g374.t1 NODE_1380_length_11680_cov_39.3951 . mRNA 6735 8953 . - . ID=g374.t1;Parent=g374;Name=g374.t1 NODE_1380_length_11680_cov_39.3951 . five_prime_UTR 8923 8953 . - . ID=g374.t1.utr5p1;Parent=g374.t1 NODE_1380_length_11680_cov_39.3951 . exon 7868 8953 . - . ID=g374.t1.exon1;Parent=g374.t1 NODE_1380_length_11680_cov_39.3951 . CDS 7868 8922 . - 0 ID=cds.g374.t1;Parent=g374.t1 NODE_1380_length_11680_cov_39.3951 . exon 6735 7665 . - . ID=g374.t1.exon2;Parent=g374.t1 NODE_1380_length_11680_cov_39.3951 . CDS 6735 7665 . - 1 ID=cds.g374.t1;Parent=g374.t1 #PROT g374.t1 g374 MQQVVIADHTDAEVEEDAPFEDYDDPFPDDIDMQEDGIEEEAVLQWATTEGHVVALACLAKYGLPGTFKITIVERNAQDRQARIGEAQETRYVVKLDSLKHGEGHAILHSNFVIRHLERLIARAMHEGKALQDSVQAASAQVNTTCCMCEKSFPIPATEILPCSDEFCIFRFEEASLGFFDYEIITNRKVLIFRIRVALAALETTAPFEPFPSTHDASQGVARVPRGSLPELTASTAERASMWSRRDRRSLADALQRALKQVELHTGPDAPYRPPYAVDLFNGSFRDIVALSTIFSSNRIRVYEANISLFGGDDSQKYTVVVPPETEVDFGRLREALGGSFFAFHGSNAKNWHSIISNGLKNATNTPLMETGSAYGPGIYFGTDAKTSLSYSTSREEQGINKMVAVCEIAGNIDDYRRSDEILVVPNERCVVVRMIVEPKNPADYNPTARDITSSMRSYISSMWNDTPEGGTHSPTANPSPVAVGTPTIDQQTLPMATDRILSELEAIQSTNTIELGFRVEPDSDCLATWTVDLFGFEPLGCPLANDMEACERFSITVQVTFPYDYPTQPPFVRIVQPIMQHNGGHVTHGGSICTNFLVDGQGWDSDYSMTAVLLSVRDLLVEERVRIDMDRLGESYSAMDARSSFDNARNANGWHSRSFR* # ORIGINAL: g372.t1 original gene structure, not modified by PASA NODE_1380_length_11680_cov_39.3951 AUGUSTUS gene 68 1700 . + . ID=g372;Name=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS mRNA 68 1700 . + . ID=g372.t1;Parent=g372;Name=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS exon 68 740 . + . ID=g372.t1.exon1;Parent=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS CDS 68 740 . + 1 ID=cds.g372.t1;Parent=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS exon 1039 1199 . + . ID=g372.t1.exon2;Parent=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS CDS 1039 1199 . + 0 ID=cds.g372.t1;Parent=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS exon 1454 1700 . + . ID=g372.t1.exon3;Parent=g372.t1 NODE_1380_length_11680_cov_39.3951 AUGUSTUS CDS 1454 1700 . + 1 ID=cds.g372.t1;Parent=g372.t1 #PROT g372.t1 g372 FFPGVVFYLTRWFSPKERGHRMAVFYSAQPIAGVLGGFLAFFILPMEGIRGLHGWQWLFMLEGLPTVLLGLITLCVLPETPKEARWLTPAERRFLLRRARMFKCEASIVHGGVNAMDDDDDEAEQLELTDLDHEGRSTGKKAPTDPSWAGAWQRAKVCLRDPLTWAFCCVNLFSLMPVYCVSFFMPSIIAEFGTGDLASNILSVIPYGVATIAMIFNARHSDQKNERYLHSVIPYMIGCGSFLIMTLVPASAHPALKLFVLSIAAAGVWAGKPSMLTWYSTHLRGSLAFGLAFVFSCGSLGGLIAPVIMGWTRDRTHSYALGMGLISMFLLIATVAATIVYGITTTRDAAEIRKRQSES* # PASA_UPDATE: g375.t1, single gene model update, valid-1, status:[pasa:asmbl_1406,status:12], valid-1 NODE_1380_length_11680_cov_39.3951 . gene 9928 11520 . - . ID=g375;Name=g375.t1 NODE_1380_length_11680_cov_39.3951 . mRNA 9928 11520 . - . ID=g375.t1;Parent=g375;Name=g375.t1 NODE_1380_length_11680_cov_39.3951 . exon 11310 11520 . - . ID=g375.t1.exon1;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . CDS 11310 11520 . - 0 ID=cds.g375.t1;Parent=g375.t1;5_prime_partial=true NODE_1380_length_11680_cov_39.3951 . exon 10946 11107 . - . ID=g375.t1.exon2;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . CDS 10946 11107 . - 2 ID=cds.g375.t1;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . exon 10611 10699 . - . ID=g375.t1.exon3;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . CDS 10611 10699 . - 2 ID=cds.g375.t1;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . exon 9928 10334 . - . ID=g375.t1.exon4;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . CDS 10209 10334 . - 0 ID=cds.g375.t1;Parent=g375.t1 NODE_1380_length_11680_cov_39.3951 . three_prime_UTR 9928 10208 . - . ID=g375.t1.utr3p1;Parent=g375.t1 #PROT g375.t1 g375 IYAINSEVKNEYQRGAFGSGARRTPVWIKKDERVPGPGDYNVAMNGGGRRAKKPSAVFASQADRLGFVPKAEVPSPGSYDVANAYEAVASDHKGTRSRVRLRHAPPGGFMSSAPRYARKGDLALPPSPEFAAPGPGAYEQQVFKNDKSGAFVSKDRRFKAGLDIVPGPGTYDLGPVYQDSVYHPSHNITLGQVVA* # ORIGINAL: g8842.t1 original gene structure, not modified by PASA NODE_3716_length_2905_cov_36.0693 AUGUSTUS gene 62 170 . - . ID=g8842;Name=g8842.t1 NODE_3716_length_2905_cov_36.0693 AUGUSTUS mRNA 62 170 . - . ID=g8842.t1;Parent=g8842;Name=g8842.t1 NODE_3716_length_2905_cov_36.0693 AUGUSTUS exon 62 170 . - . ID=g8842.t1.exon1;Parent=g8842.t1 NODE_3716_length_2905_cov_36.0693 AUGUSTUS CDS 62 170 . - 0 ID=cds.g8842.t1;Parent=g8842.t1 #PROT g8842.t1 g8842 MDGLHYRRKILLFGAGYVAPPFVEYMLRRPDNFVTI # PASA_UPDATE: g8843.t1, single gene model update, valid-1, status:[pasa:asmbl_6447,status:12], valid-1 NODE_3716_length_2905_cov_36.0693 . gene 622 2643 . - . ID=g8843;Name=g8843.t1 NODE_3716_length_2905_cov_36.0693 . mRNA 622 2643 . - . ID=g8843.t1;Parent=g8843;Name=g8843.t1 NODE_3716_length_2905_cov_36.0693 . five_prime_UTR 2543 2643 . - . ID=g8843.t1.utr5p1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . five_prime_UTR 2263 2279 . - . ID=g8843.t1.utr5p2;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . exon 2543 2643 . - . ID=g8843.t1.exon1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . exon 2181 2279 . - . ID=g8843.t1.exon2;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . CDS 2181 2262 . - 0 ID=cds.g8843.t1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . exon 1883 1923 . - . ID=g8843.t1.exon3;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . CDS 1883 1923 . - 2 ID=cds.g8843.t1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . exon 1462 1576 . - . ID=g8843.t1.exon4;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . CDS 1462 1576 . - 0 ID=cds.g8843.t1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . exon 622 1124 . - . ID=g8843.t1.exon5;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . CDS 880 1124 . - 2 ID=cds.g8843.t1;Parent=g8843.t1 NODE_3716_length_2905_cov_36.0693 . three_prime_UTR 622 879 . - . ID=g8843.t1.utr3p1;Parent=g8843.t1 #PROT g8843.t1 g8843 MVAGTLRHLRSLRKMKHDGGWIHHLLAEAENERMHLLTWMRVSQPNLLERTLVMAVQAVFYNAFFAMYLLTPKTAHRLVGYLEEEAVISYTGFLEQIDSGKIANGPAPQIAIEYWNLPESATLRDVVLAVRADEAQHRDVNHHLADRILCKNEDLRSPLK* # ORIGINAL: g2106.t1 original gene structure, not modified by PASA NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS gene 2409 4208 . + . ID=g2106;Name=g2106.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS mRNA 2409 4208 . + . ID=g2106.t1;Parent=g2106;Name=g2106.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS exon 2409 4208 . + . ID=g2106.t1.exon1;Parent=g2106.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS CDS 2409 4208 . + 0 ID=cds.g2106.t1;Parent=g2106.t1 #PROT g2106.t1 g2106 MSDIVKVGFGSLAPETVVNHIVPYLSNADISSLSKVNSALHTHLRQRCLYHLWPPYNRKYIEDPAFRAEVKASIPVGRIVLTHCFKTSDLSAFADIHTVNITTGTTVDCAPFADVHTIRATHYFSSSRPLSARFVSTQQYIKKELLPMLANVPSLDLENVEDVSSLRPRHIVLRSSTANDISSLVDADSVHLIECLSVPLSDIAALRGLVKVELTCFDLTFSMLRAIPPEFARLHTLSLSRAKFLSDVTCGCRIHTLRLVHCPNVIDVSALANVHVLDLTGGPKPDNSEAEKYGPEWDALPFRDVAALSHVHTLILSDNRCLKGIESLGNNHTLILKHTRCGIEDFSHLGNVHALNLLGNTEIKSGTGLGRVHTLTLANCVACLDVSELGSVHALDLSWCHRLSDVSALGKVHTLVLQGCRALRDASALSGVHSVDLSDIRTFDDSSALGTVHTLNLSGTDVSDVSHLGGVHTLYLCRCKRVVDASMLGSVYYLNLLATRVSDVRNLGTVHTLILRGTPVSDVSSLGSVHTLDLSRCKSVIDVSPLGSVYSLNISECKNIVNVSALGRVCILTAIRSGIQDWSPLMGVKRLINGVPYWV* # ORIGINAL: g2107.t1 original gene structure, not modified by PASA NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS gene 6308 6664 . - . ID=g2107;Name=g2107.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS mRNA 6308 6664 . - . ID=g2107.t1;Parent=g2107;Name=g2107.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS exon 6308 6664 . - . ID=g2107.t1.exon1;Parent=g2107.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS CDS 6308 6664 . - 0 ID=cds.g2107.t1;Parent=g2107.t1 #PROT g2107.t1 g2107 MLLILTLFETFRPFLLFWQGVSFLLYLINDNAACISGDVHGGIVFLGSPEAERHVAVDPSGAAVVNGNDDSGKFSGRDSIGKTTEEVLELLFDTHGRRDMFFNGDCGDEEGWYVTAWY* # ORIGINAL: g2105.t1 original gene structure, not modified by PASA NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS gene 870 1693 . + . ID=g2105;Name=g2105.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS mRNA 870 1693 . + . ID=g2105.t1;Parent=g2105;Name=g2105.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS exon 870 1521 . + . ID=g2105.t1.exon1;Parent=g2105.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS CDS 870 1521 . + 0 ID=cds.g2105.t1;Parent=g2105.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS exon 1656 1693 . + . ID=g2105.t1.exon2;Parent=g2105.t1 NODE_2142_length_7532_cov_43.8328_potentialcontaminant AUGUSTUS CDS 1656 1693 . + 2 ID=cds.g2105.t1;Parent=g2105.t1 #PROT g2105.t1 g2105 MDSTASMQTIVVSNSIAKEMSRSPTLNTIPPEILLTHIIPYLPLSDVASLARVDGTLRARLRHERLYHLWPLYNLKYAEDPAFREEVKAVIPVGRLVLVGGVNVQGKYQTLHDLSSFADVHTAELCVMPVGKDFSSLANVQTIVGPILDTKIVLSANYVVATLDISCLASVSQLRPQHIALRGCEKLDDMSALIAKTVHLIECRTACADRNAAGPRQACGYISGPDSLL* # PASA_UPDATE: g7169.t1, single gene model update, valid-1, status:[pasa:asmbl_4101,status:12], valid-1 NODE_2349_length_6618_cov_37.6026 . gene 1615 5905 . - . ID=g7169;Name=g7169.t1 NODE_2349_length_6618_cov_37.6026 . mRNA 1615 5905 . - . ID=g7169.t1;Parent=g7169;Name=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 5797 5905 . - . ID=g7169.t1.exon1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 5797 5905 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 5389 5567 . - . ID=g7169.t1.exon2;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 5389 5567 . - 2 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 5024 5128 . - . ID=g7169.t1.exon3;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 5024 5128 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 4678 4767 . - . ID=g7169.t1.exon4;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 4678 4767 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 4326 4402 . - . ID=g7169.t1.exon5;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 4326 4402 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 3919 4087 . - . ID=g7169.t1.exon6;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 3919 4087 . - 1 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 3604 3759 . - . ID=g7169.t1.exon7;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 3604 3759 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 3235 3321 . - . ID=g7169.t1.exon8;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 3235 3321 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 2724 2899 . - . ID=g7169.t1.exon9;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 2724 2899 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 2547 2584 . - . ID=g7169.t1.exon10;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 2547 2584 . - 1 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 2067 2182 . - . ID=g7169.t1.exon11;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 2067 2182 . - 2 ID=cds.g7169.t1;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . exon 1615 1842 . - . ID=g7169.t1.exon12;Parent=g7169.t1 NODE_2349_length_6618_cov_37.6026 . CDS 1615 1842 . - 0 ID=cds.g7169.t1;Parent=g7169.t1 #PROT g7169.t1 g7169 MMMAVPVALADIARALENQDTKTVLNALSSLNIYVEGIAHTSAFYSKLPELLNVVPVSHLFNTLSYGDEDVTQSACRVLGKLLPGVPTSYLITSFRTYLGLGLQHPMAPVRELALTQLARFTDTEANLLELYNADLLTQALELLADESLSVATKAADLTVKASRFPSGITFMFSGAGQETLSSLIKGASTRRMRVYEALITAGGVSDAAFSAIKTAGLFSRLIADLTSKDVLVRLNAIELVGKLSELPAGFGYADTTGMYSRISDSLAVSPSEELDSAVIAPTSLRMVAQLFNLKHVIPLDFHRKYPFVDAIYAHVESVDGAVRCAAIEALGILGSRDGFQVVRGFDPSVSRLVDGAFACLLGTQSELKVAAMHAAASILTTRAQLEWSQRERESGRPSSILLILDHAKNPFEDIRFAAFRLLQAIGGHAWGVAALAQAPGFIEFLLNRSTEYSKTGREWKHAIVDTIARTPGAEGIVGVLIHRKLRAYIQEGPFAPGSDMSVAMKSAS* # PASA_UPDATE: g7168.t1, single gene model update, valid-1, status:[pasa:asmbl_4100,status:12], valid-1 NODE_2349_length_6618_cov_37.6026 . gene 2 1038 . + . ID=g7168;Name=g7168.t1 NODE_2349_length_6618_cov_37.6026 . mRNA 2 1038 . + . ID=g7168.t1;Parent=g7168;Name=g7168.t1 NODE_2349_length_6618_cov_37.6026 . five_prime_UTR 2 2 . + . ID=g7168.t1.utr5p1;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . exon 2 130 . + . ID=g7168.t1.exon1;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . CDS 3 130 . + 0 ID=cds.g7168.t1;Parent=g7168.t1;5_prime_partial=true NODE_2349_length_6618_cov_37.6026 . exon 298 400 . + . ID=g7168.t1.exon2;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . CDS 298 400 . + 1 ID=cds.g7168.t1;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . exon 693 1038 . + . ID=g7168.t1.exon3;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . CDS 693 914 . + 0 ID=cds.g7168.t1;Parent=g7168.t1 NODE_2349_length_6618_cov_37.6026 . three_prime_UTR 915 1038 . + . ID=g7168.t1.utr3p1;Parent=g7168.t1 #PROT g7168.t1 g7168 HTPTHVQAEYRKNHEIRVKVGPAARKDKDDGALSDQTFGITRRSSTPIKALLANQYQRQWLDDQKKTQDDKEASKKKIVAYSTSTTSRKAAPRKPQEQPVDELFKMTKFKKVPAKIQSFRHVDGSDRSADGGLAVNAVDGVSHDFANVTV* # ORIGINAL: g3555.t1 original gene structure, not modified by PASA NODE_2373_length_6514_cov_35.709 AUGUSTUS gene 5455 6336 . - . ID=g3555;Name=g3555.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS mRNA 5455 6336 . - . ID=g3555.t1;Parent=g3555;Name=g3555.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 6105 6336 . - . ID=g3555.t1.exon1;Parent=g3555.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 6105 6336 . - 0 ID=cds.g3555.t1;Parent=g3555.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 5455 5726 . - . ID=g3555.t1.exon2;Parent=g3555.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 5455 5726 . - 2 ID=cds.g3555.t1;Parent=g3555.t1 #PROT g3555.t1 g3555 MECGKDCEVCRFSHPGSTRHAEITWGGLGATLPSQHNSQTADDGWVSIDGEFVCVNAANISCRCDKSPFGMSRYAHLGDGYADLILVRNCSRLDYLHHLIRLSNKSTHHEMEFVEVHRVSEFKFTALGSRRSMWNSDGELLAETDIHFAVHRQAVALFGRPLDASGR* # ORIGINAL: g3554.t1 original gene structure, not modified by PASA NODE_2373_length_6514_cov_35.709 AUGUSTUS gene 3541 4883 . - . ID=g3554;Name=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS mRNA 3541 4883 . - . ID=g3554.t1;Parent=g3554;Name=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 4769 4883 . - . ID=g3554.t1.exon1;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 4769 4883 . - 0 ID=cds.g3554.t1;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 4492 4595 . - . ID=g3554.t1.exon2;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 4492 4595 . - 2 ID=cds.g3554.t1;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 4089 4202 . - . ID=g3554.t1.exon3;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 4089 4202 . - 0 ID=cds.g3554.t1;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 3541 3816 . - . ID=g3554.t1.exon4;Parent=g3554.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 3541 3816 . - 0 ID=cds.g3554.t1;Parent=g3554.t1 #PROT g3554.t1 g3554 MASSAVEGLRLRTLRTVADVLLPETQRTRERRANISTLSTEQLSSCTLQQLMYFNMYFWPFWLAASIVSLESKYDAIHSNYKYAPIVIYIIMSIVEPIRIYLGYCGNLLEKVPQLAGFWILTLIIQLPLCLCLLLNNQFFVLPLEYAINIPYSIMLGFQVIVGYFSLLVMTRMQSAVYQIRQYAVPDKEVDPVEEADVSFFD* # ORIGINAL: g3553.t1 original gene structure, not modified by PASA NODE_2373_length_6514_cov_35.709 AUGUSTUS gene 1247 3109 . + . ID=g3553;Name=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS mRNA 1247 3109 . + . ID=g3553.t1;Parent=g3553;Name=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 1247 1447 . + . ID=g3553.t1.exon1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 1247 1447 . + 0 ID=cds.g3553.t1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 1599 1663 . + . ID=g3553.t1.exon2;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 1599 1663 . + 0 ID=cds.g3553.t1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 1772 1911 . + . ID=g3553.t1.exon3;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 1772 1911 . + 1 ID=cds.g3553.t1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 2105 2399 . + . ID=g3553.t1.exon4;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 2105 2399 . + 2 ID=cds.g3553.t1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 2545 2887 . + . ID=g3553.t1.exon5;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 2545 2887 . + 1 ID=cds.g3553.t1;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS exon 3077 3109 . + . ID=g3553.t1.exon6;Parent=g3553.t1 NODE_2373_length_6514_cov_35.709 AUGUSTUS CDS 3077 3109 . + 0 ID=cds.g3553.t1;Parent=g3553.t1 #PROT g3553.t1 g3553 MFPPTVDEVTLVAEPTQIRFKSYIEPGLSSEIAARTLYTEVAVDTGDLDRYSVPNPVAITFCLKEFKAILAFCEAIKLPISINFDAPGSPIIFSATDNVALRAEFVLATLQEDGDAHLSASNNTRAARANRDSNDGPVCLSTGAEPSNVIDTQNIATPHPNRPNTDQPSGMAPSQDHISGGHQYHSQHNMYDPTSQPHSQPYLPSTHGLHSSGIVTSTPLTGHTVVQRHDFMALTSPAVGPRGAIGASPVMRAAHGHTSLLPNVGAASYDDGAYGAGSMATGVTQHSIPPHVTSDTQMSDATTMEPPSMHSAKRGSGETRGGDSFVAATPNASDAEDDYVEATPPRKRAKVFSDEESD* # ORIGINAL: g13919.t1 original gene structure, not modified by PASA NODE_2581_length_5797_cov_43.4946 AUGUSTUS gene 92 1609 . - . ID=g13919;Name=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS mRNA 92 1609 . - . ID=g13919.t1;Parent=g13919;Name=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 1573 1609 . - . ID=g13919.t1.exon1;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 1573 1609 . - 0 ID=cds.g13919.t1;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 1322 1341 . - . ID=g13919.t1.exon2;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 1322 1341 . - 2 ID=cds.g13919.t1;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 1156 1233 . - . ID=g13919.t1.exon3;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 1156 1233 . - 0 ID=cds.g13919.t1;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 697 843 . - . ID=g13919.t1.exon4;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 697 843 . - 0 ID=cds.g13919.t1;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 92 220 . - . ID=g13919.t1.exon5;Parent=g13919.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 92 220 . - 0 ID=cds.g13919.t1;Parent=g13919.t1 #PROT g13919.t1 g13919 MFSSWFGGGNLETHLFNLKFAAKQLNRTAQKCEKEEKAEKVKLKQAIQKGNHEGARIHAENSIRQHNQALNFLRMSSRIDAVASRVETAVRMKQVTKSMAGVVQAMERAAQSMNMEQMSNIMDKFEKQFEDLDVASQ # ORIGINAL: g13920.t1 original gene structure, not modified by PASA NODE_2581_length_5797_cov_43.4946 AUGUSTUS gene 2157 5504 . - . ID=g13920;Name=g13920.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS mRNA 2157 5504 . - . ID=g13920.t1;Parent=g13920;Name=g13920.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS exon 2157 5504 . - . ID=g13920.t1.exon1;Parent=g13920.t1 NODE_2581_length_5797_cov_43.4946 AUGUSTUS CDS 2157 5504 . - 0 ID=cds.g13920.t1;Parent=g13920.t1 #PROT g13920.t1 g13920 MSAANNEAARDRLVRFRASLREMIFTGAIARTEKVTKEDLSRAYNGSGFGTTLYLACTGIPGAQGVPAFITRAGPGLFRVNVNMLQAAPLASPTATTTTTMAAGAAQPTMPIRSAPPRPTDARTAPIIPHSPSVPVAPARTITTSANLQSASQTAGGQSQRTGLPAPPLPPTKRPSTAQKAMTSTKVVPQKGSKAQMLSASENKGGCVVLPSQDNSHSHVANALVFTISNGGTKAVNLRDVVVLCHGSNNKDAFSLSHTHGAMPSLLAPGAQWSVTVLCAGPTLSIRSAVLVFMLNGFIIARTLEWTLLGVSGGHNTGSISPDVASALLPIAPYVPKKRGKRPVDGVKSTVVSRGDKPAKQMGSKPFTRPVRFRPDVMEWMLDGLRTRAEVALTPETYANKMHALLDLEEFAESAALSQYDIDETTFLRKTSTLLWLSVPGLMEKRPSVLVGDIITMTVEGRAGQMHQGCVHEVLRDEVGVHFAHSIHTMVTAKSTRVSIRFGYNRLVKMLCHRAVDLFAKDSDALVERMFPSAPSATAPHRHAATAPIKTFHRPLNAEQATAVRRIAQMAPPRLAPFFIFGPPGTGKTTTLVEAIMNVLAVAKQSKRVARVLVCAPSNAAADLLAWNLYRASHTEKGNLHVGAFNASNTLRLQARGRPIQSLNAEQKTIIIKLSQPNNELEGFETPSKATAESKTVVISTLSTSAVLYSIGINGDHFSHIFIDEVGQASEPEVLCAISGLTNSLTQIVLAGDHKQLGPVMQSTDAAKFGLGVSVIERLMSIPEFSDARAENYIKLVRNYRAHADLLTIPSRLFYDGKLVAMATGSHEDLVGFRGNNFPLYFKHVDGREMRERGSPSWFNLQEIEEVAAVVNELMRNTSFVPQVVASDIAVISPYHRQVVKLRVALDAQVRLGLRVGSVEQFQGGESRVVILTTVRSSRDQFDAELVGRLGFVESPQRFNVAITRAQSLLVVVGNETVLSADDRWRMLIEFARTRGRPPTVSQQQTRPQTTTPRSSAPSQLPGSSLGAASSLSGIPAPALWRTPLLAQSHLHDDDSEQLNFFRQDTAPSVGAPSGQTATNSLVQQVSVWADMLLVAFERMAVGDDYSSSDLDFMI* # ORIGINAL: g10439.t1 original gene structure, not modified by PASA NODE_3512_length_3295_cov_89.6444 AUGUSTUS gene 178 3221 . + . ID=g10439;Name=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS mRNA 178 3221 . + . ID=g10439.t1;Parent=g10439;Name=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 178 263 . + . ID=g10439.t1.exon1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 178 263 . + 0 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 548 830 . + . ID=g10439.t1.exon2;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 548 830 . + 1 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 1145 1231 . + . ID=g10439.t1.exon3;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 1145 1231 . + 0 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 1428 1607 . + . ID=g10439.t1.exon4;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 1428 1607 . + 0 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 1972 2094 . + . ID=g10439.t1.exon5;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 1972 2094 . + 0 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 2313 2475 . + . ID=g10439.t1.exon6;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 2313 2475 . + 0 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 2756 2878 . + . ID=g10439.t1.exon7;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 2756 2878 . + 2 ID=cds.g10439.t1;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS exon 3109 3221 . + . ID=g10439.t1.exon8;Parent=g10439.t1 NODE_3512_length_3295_cov_89.6444 AUGUSTUS CDS 3109 3221 . + 2 ID=cds.g10439.t1;Parent=g10439.t1 #PROT g10439.t1 g10439 VNTRPTKVLRGGNIAVVNWNEIVVGDIIRMEDGEFVAADLLVLSTSEPHGNCYVETAELDGETNLKLRQALKETAELTTDSALSGLSGTITCEAPNNNLHRFDGQMLLGGKTLPIDNDRMLLRGCVLRNTKWIYGIVVFAGHDTKLMQNSGGARFKRTHLDKTMNVLVLTIFLFLIALCFFAAIGSGVWENEVGNDFQIYLPWEDYADTPPKIGALTSLSFVIILNTLVPISLYVSVEIIRLVQSWLIDWDVKMYHEETDTPAQSRATTLTEELGQVEYIFSDKTGTLTRNEMTFLRCSINGVEYGKGVTEAQMGALSRDGKKMVVPEYKKLDFSWNPHSHPKFVFYDDALVHDIRGGSVACREFFKLLALCHTVVADKVWRHFQ* # ORIGINAL: g2956.t1 original gene structure, not modified by PASA NODE_6576_length_543_cov_45.3034_potentialcontaminant AUGUSTUS gene 1 432 . - . ID=g2956;Name=g2956.t1 NODE_6576_length_543_cov_45.3034_potentialcontaminant AUGUSTUS mRNA 1 432 . - . ID=g2956.t1;Parent=g2956;Name=g2956.t1 NODE_6576_length_543_cov_45.3034_potentialcontaminant AUGUSTUS exon 1 432 . - . ID=g2956.t1.exon1;Parent=g2956.t1 NODE_6576_length_543_cov_45.3034_potentialcontaminant AUGUSTUS CDS 1 432 . - 0 ID=cds.g2956.t1;Parent=g2956.t1 #PROT g2956.t1 g2956 MAARDGVISPLMGSPLLPNPNLFPCADSLGLLYRNFLDVAGATERFVSALTTPSLRPLVNPHLSLSRDTSYASGLDSAGSDDDAFGTFRDVTLQSGGHNTDATIGRRTKHHRLLRDETLVLAEAFAQDEGGMNGPTIVMGAHAG # ORIGINAL: g2135.t1 original gene structure, not modified by PASA NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS gene 301 1939 . - . ID=g2135;Name=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS mRNA 301 1939 . - . ID=g2135.t1;Parent=g2135;Name=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 1314 1939 . - . ID=g2135.t1.exon1;Parent=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 1314 1939 . - 0 ID=cds.g2135.t1;Parent=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 982 1168 . - . ID=g2135.t1.exon2;Parent=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 982 1168 . - 1 ID=cds.g2135.t1;Parent=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 301 705 . - . ID=g2135.t1.exon3;Parent=g2135.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 301 705 . - 0 ID=cds.g2135.t1;Parent=g2135.t1 #PROT g2135.t1 g2135 MTSNDQFNLLTVLDVELAYDPAAPPKSTDRVGVVSALNATVLPASQYPPVRFASGGPLVLRDCPKDNTTTLTSPTFGCALPDAGVSRTLSIANLFVSDFRKNIVSASSVTVEGDTIVCRNVECRMGNLINDAIRWKSDNWCDVCILNSGTIRGSFAKGNVTIADVYTVLRFRNTLSRLTVPGRTIVAALENGVALAVDRANITTSGTGRFPQVTGLRYKFDPSKAPYSGRVHSVEVAGRDGKFSQIQYNSAYQICTIDFVRTGGDNYTMFSDPAFRQYDFGPELASVFQEYIMAVNPINVTLDGRIQRTYYNATSANFLKCKLYAEAATDPSFGCIAAPVLSKGSSVPVGLIVGCVVGGFFVLGIGFFVLLRKMQSGMERQLHSMSTQNKEMRAVIPYEELEFGHI # ORIGINAL: g2136.t1 original gene structure, not modified by PASA NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS gene 2039 3650 . - . ID=g2136;Name=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS mRNA 2039 3650 . - . ID=g2136.t1;Parent=g2136;Name=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 3220 3650 . - . ID=g2136.t1.exon1;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 3220 3650 . - 0 ID=cds.g2136.t1;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 2622 2808 . - . ID=g2136.t1.exon2;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 2622 2808 . - 1 ID=cds.g2136.t1;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 2246 2473 . - . ID=g2136.t1.exon3;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 2246 2473 . - 0 ID=cds.g2136.t1;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS exon 2039 2146 . - . ID=g2136.t1.exon4;Parent=g2136.t1 NODE_3065_length_4416_cov_38.8558_potentialcontaminant AUGUSTUS CDS 2039 2146 . - 0 ID=cds.g2136.t1;Parent=g2136.t1 #PROT g2136.t1 g2136 MASRDGATAVPHQRLVQSSVQRTRSPLINVGYVAVLISACIIASACVPCSAAPTIRQVRLVLSGNLRGVTIEEATSGVNYGGLDRLSAVVKAASDPALIPYPNTTAFVVRADVGCWFGTTLFERVHEGRVTLDIYSQLDYHVKGLGINDLQPGLDTLASTLASFPNSITVQPANIVFASRHALSRIQSMSRFQVVELSNIGGNTIKADCNDGDGPLVTVLDDVVRMVQAAVDDMMAAHPDVALVVCLVSRVLRIQEQLGTYAARLRGIHVYAGTGYTPSNSQFPVTGIIPTDPIPYRSTLTTGDPGKSLCQHSALAA* # PASA_UPDATE: g12969.t1, single gene model update, valid-1, status:[pasa:asmbl_3900,status:12], valid-1 NODE_2269_length_6965_cov_38.8491 . gene 99 5085 . + . ID=g12969;Name=g12969.t1 NODE_2269_length_6965_cov_38.8491 . mRNA 99 5085 . + . ID=g12969.t1;Parent=g12969;Name=g12969.t1 NODE_2269_length_6965_cov_38.8491 . five_prime_UTR 99 100 . + . ID=g12969.t1.utr5p1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 99 280 . + . ID=g12969.t1.exon1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 101 280 . + 0 ID=cds.g12969.t1;Parent=g12969.t1;5_prime_partial=true NODE_2269_length_6965_cov_38.8491 . exon 400 494 . + . ID=g12969.t1.exon2;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 400 494 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 804 940 . + . ID=g12969.t1.exon3;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 804 940 . + 1 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 1072 1176 . + . ID=g12969.t1.exon4;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 1072 1176 . + 2 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 1362 1495 . + . ID=g12969.t1.exon5;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 1362 1495 . + 2 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 1635 1737 . + . ID=g12969.t1.exon6;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 1635 1737 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 1954 2110 . + . ID=g12969.t1.exon7;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 1954 2110 . + 2 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 2361 2490 . + . ID=g12969.t1.exon8;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 2361 2490 . + 1 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 2625 2876 . + . ID=g12969.t1.exon9;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 2625 2876 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 3089 3231 . + . ID=g12969.t1.exon10;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 3089 3231 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 3487 3581 . + . ID=g12969.t1.exon11;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 3487 3581 . + 1 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 3901 4091 . + . ID=g12969.t1.exon12;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 3901 4091 . + 2 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 4268 4349 . + . ID=g12969.t1.exon13;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 4268 4349 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 4575 4645 . + . ID=g12969.t1.exon14;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 4575 4645 . + 2 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . exon 4837 5085 . + . ID=g12969.t1.exon15;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . CDS 4837 4926 . + 0 ID=cds.g12969.t1;Parent=g12969.t1 NODE_2269_length_6965_cov_38.8491 . three_prime_UTR 4927 5085 . + . ID=g12969.t1.utr3p1;Parent=g12969.t1 #PROT g12969.t1 g12969 NPANYGSAPPLNGLRQFNRNDSNDPISLPSVPHSDGDIAQAQRPKHVRRLSEEIGLLPGEVDFFGKYKAKISLGVLDRLQNINNGKYVVVTGITPTPLGEGKSTTTIGLTQALGVELRKNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHMTGDIHAITAANNLCAAALDARMFHEKTTEKDDVLYGRLVPAVGKAKKREFSAIQTRRLKKLGITKTDPDSLTPEEVHDFVRLDVDPETITWRRVMDTNDRFLRQITVGQSPTEVGHERVTGFDISVASEIMAVLALTTSPEDMRERLGNMVVATSRTGRPVTADDLGVAGALAVLMKDAIRPNLMQTLEGTPVLVHAGPFANIAHGNSSIIADRIALKLAGPDGYVVTEAGFGADIGMEKFFNIKCRYSGLRPNCVVLVATIRALKMHGGGPQVVAGKPLPVEYTQENLALVEAGTCNLAKQIENARYFGVPVVVAINHFSSDTDNESEIVRKAALAAGAYDAVTCKHWALGSKGAKDLAEAVERACSQPTNFQFLYDLDLTVEQKIETIASKIYGADGIEILPHAAKQIARYVEQGFSHLPICMAKTHLSLSSDPEKKGTPKGFVIPIREVRASVGAGFLYPLVGQMPTMPGLPTRPCYFDVDWDTKHNRVVGLF* # PASA_UPDATE: g12970.t1, single gene model update, valid-1, status:[pasa:asmbl_3899,status:12], valid-1 NODE_2269_length_6965_cov_38.8491 . gene 5212 6338 . - . ID=g12970;Name=g12970.t1 NODE_2269_length_6965_cov_38.8491 . mRNA 5212 6338 . - . ID=g12970.t1;Parent=g12970;Name=g12970.t1 NODE_2269_length_6965_cov_38.8491 . exon 6307 6338 . - . ID=g12970.t1.exon1;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . CDS 6307 6338 . - 0 ID=cds.g12970.t1;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . exon 5948 6104 . - . ID=g12970.t1.exon2;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . CDS 5948 6104 . - 1 ID=cds.g12970.t1;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . exon 5675 5775 . - . ID=g12970.t1.exon3;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . CDS 5675 5775 . - 0 ID=cds.g12970.t1;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . exon 5212 5463 . - . ID=g12970.t1.exon4;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . CDS 5256 5463 . - 1 ID=cds.g12970.t1;Parent=g12970.t1 NODE_2269_length_6965_cov_38.8491 . three_prime_UTR 5212 5255 . - . ID=g12970.t1.utr3p1;Parent=g12970.t1 #PROT g12970.t1 g12970 MIANPDVAAYRYDPYPKLFTREHYETEAMHKLRKEAIATASKARKFGIILGTLGRQGSPKVLQSIEQQLTDAKVEYVVVLLSEIFPKKLGLFNDVDAWIQIACPRLSIDWGHFFERPLLSPYEAAVALQTAQWQPVYPMDFYSADSLGPWTPNNAAHKPPRKARA* # ORIGINAL: g5289.t1 original gene structure, not modified by PASA NODE_838_length_17090_cov_40.7878 AUGUSTUS gene 237 2193 . + . ID=g5289;Name=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS mRNA 237 2193 . + . ID=g5289.t1;Parent=g5289;Name=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 237 287 . + . ID=g5289.t1.exon1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 237 287 . + 0 ID=cds.g5289.t1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 396 523 . + . ID=g5289.t1.exon2;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 396 523 . + 0 ID=cds.g5289.t1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 674 856 . + . ID=g5289.t1.exon3;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 674 856 . + 1 ID=cds.g5289.t1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 1102 1347 . + . ID=g5289.t1.exon4;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 1102 1347 . + 1 ID=cds.g5289.t1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 1660 1731 . + . ID=g5289.t1.exon5;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 1660 1731 . + 1 ID=cds.g5289.t1;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 1950 2193 . + . ID=g5289.t1.exon6;Parent=g5289.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 1950 2193 . + 1 ID=cds.g5289.t1;Parent=g5289.t1 #PROT g5289.t1 g5289 MPAKIAVIGGAGSVGATTAYAILLRRIASELLLIDLDKERCEAQVLDLSDAAFLADTKIRMGTPQEAGQCDIAIITAGAKQRPGESRVDLIGRNRAILSSVIDSMKPFKKETVLLLISNPVDILTYFAQKLSGLPQGQVLGSGTFLDSARLRSEIATRLDVAETAVHAYVLGEHGDSQFVAWSCAHVANTPLLSFPAIRDLDREKLAADVKGKAYRIIELKGATYFGIGGVAASICESIIFDLRHVRPLSHYIPELGVCLSFPAVLGQAGVKQTLKPPLTPEEEALLKSSAQSMREVIDKYETPETK* # ORIGINAL: g5291.t1 original gene structure, not modified by PASA NODE_838_length_17090_cov_40.7878 AUGUSTUS gene 6615 16383 . - . ID=g5291;Name=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS mRNA 6615 16383 . - . ID=g5291.t1;Parent=g5291;Name=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 15082 16383 . - . ID=g5291.t1.exon1;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 15082 16383 . - 0 ID=cds.g5291.t1;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 13573 14691 . - . ID=g5291.t1.exon2;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 13573 14691 . - 0 ID=cds.g5291.t1;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 13276 13381 . - . ID=g5291.t1.exon3;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 13276 13381 . - 0 ID=cds.g5291.t1;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 8038 12906 . - . ID=g5291.t1.exon4;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 8038 12906 . - 2 ID=cds.g5291.t1;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS exon 6615 7675 . - . ID=g5291.t1.exon5;Parent=g5291.t1 NODE_838_length_17090_cov_40.7878 AUGUSTUS CDS 6615 7675 . - 2 ID=cds.g5291.t1;Parent=g5291.t1 #PROT g5291.t1 g5291 MTNILPAFAATVLKQILRNSRNVEIVQATREADPLASLLCRARKAFAVLGEDSDFTCMPTPYVRLSSLRFSSTASAGAQVEGSSVARVVVSCELFDAEHTARCLGVRATDLPLVASLVGNDYLSGDDLAHFHAAVGAGHNVDLHAKISAVVAFIARHPNITPKQCAMLLAGARDLVSLASKSIVVQWGDTELSSLPSFLSARPAAATSVVHTYEPSNDAGSDMASEADVPPPTARSRTTGKPPQMSFAQVQGVLKESLSRYGDEASYTLRADQDRALLGAVAGALNSGYVDSSLLSLLLNGTMSLPPVLESAERESAADSHHHHQQPRKSVLLVLQPVRASLYGVVANLFGSRSTIVERIDSVGDVDVSVDLKNVDALAANTLAATVRSETLSRMERQLLLVTGIGGVPKNIPDLPALMRVAPDDTTLLALCIRILSQRGVFNTPERLLAIEASLAALVIKDLTPVTWRAQADPGTSLPDVQFVVTATAAALHHALLACNVVSTYDVVNRSTLIKDIDDEGLQLDLRDIFDGRLVHSVVRACLANQFESHSPSNDGALREPSDIVSEFGQPAMDSLQRLRRVALGNRDLSLPLPVVTCAVSMLGTDPKALTSGLRNADKYPGDHIYALHTIPTLCAMDVKLDSPAPSSLSTPLALRSSRLFERVFSDGDWRNNIAVPPTPTTRTAARPSTETQGFERQLSGFPRTKEDESATVEKGRLQRAAAAIRTLSRSVDVSLPSTAPPEDDARYDPFQKNAFRQLSSGKSLIVCAPTGSGKTEVALRAIENLLRSSTEQRGVYVCPTKALAHQVYSELYARFIRSSPGPPIVGIVTGDFRIDSNAQIIVTVPEMLELILLDSNGYQLLPLRLAVLDEIHMMSEEDRGPVWERVVMLLPRHCSFVALSATIGSPERLMNWLSSFRDDAVMVSETIRKVPLRFYAHGAGIRPLSPFVFQGTLPKNGLPLEEGVHDGADLEEVQRAVVLSLCVNDLLEAANPKKMKRDDDAAIISTALQRMSVAPESLSCDSGGKAADGGDVCVRDGEARDASVPNAMPDQAVLDANAGAVLAPSATPSAPVSHGQPCDLPAPAGAVAHTERNANAVSTDDDLADGELIVFTPSRNGDASTPGLNSAHMTSVQHSAATAAATADKWSAMVTILPKSKGTGKSSDRVKAVFAEMVGANATAKSLKRLLKESVAARPGRKKALEVWVNLLAAHTSHPSVKAAAPTLLKIISVYVDGLGRSAMHVSTAKKTLLSKLEKCKSLFGVDAMSADAIVNEAAGVATDASNSDDGTIISSAQVGVQDAQHTTTSAVRNDDTPDNDVGATLGKGRGGEGEKDAAVVEKEMWQRLRPALDRLVELAEAPDIDGIVAHCKLTVAGNPGYKPALELWNTFKALPTEKWSRLSFARVVASIIDGDVDKTKVAMRRITEFVCAAAAVDESTRYAFYLTMSTPQGIGLLSHIHLRLTGHAKVDGWGSVSLLPHANVVVPDWFRGQLSAGVTRAVEERLQKDGHTPSVLRCALRFGLYSHRSASIELCLEHGLRTIGATGHTHDATTLLDYCYATKNWHLIERILPNVLSRCEDPTGVAISLVHGLSSKLKTNDDSRKFLARMVGRMCATVLSTASDLAASSHAFRVTDAHRTDALAACTAVSRVDPIVRSIVVKMFGAKIFASDSASAVGAADAQTSGGGKTASLNFANLFGAAINDRAYQVSDCIERLDVSGTIAALRKGKQSVGLAEVLHSSLLNMKTDEHVTRMFAVAVLSDIQVDSPFGFAILEALVTRRQRAAPDAGAPDACVTRSFLRIVSSLASPGLHRLSGKATMNPFDYCVLGMRAFGITLDNAAAAVGLDKAPAVRFDVSSIDPLARLHLQRRVAEGLSLSLSGLSSRSDVDAGQVVATLYAELKARDLLPVIVFVPSRAACEDMTKRIAAAVALHGLPPEKNTHASQVAIDAAVARLSSGGVPMGLLDALRAGVGIHNAGMSGPWRLEVENLFRAGHLPLVVATSTLAVGINMPCRTVVLAGEATQKVLTIASAAQMAGRAGRRGFDTVGHVVFCSFEWDRMRALFMSPLPAVTGYLRATPSSALQLASLASAPEADETDLARTACVLANPLFSGDSVERKEQALTQLACSVATLKWLGLVGGSSTACASPMHPTGTLGIGDGMRVTSLGEASRYLSYADPANLFVLKAMMDGSLEAACKASGQNALLTFLCYIVSAVPYKEPTEADIFSKKLPGTVDAGEGVDETESVDVTCEDDFSLDTTFGSTLTTCLPPLHTELVSSLNSFNVGIYRLALSAGWERRRFVLERERLEAARFADIASLDVVSTYGAGRLSGAATPGRAGLGGVGDGRIIVDDATRQSHEAFLLLSGDVRSQSQVNETDRNAWSQIVGRYLGLRHNAFPFADPSDIGKQFKGHIYDLVVRQADKDAVLEAHSMALGDLQRSVGEFAKFLIKFQEFVASATEHLGVDDFRYLRSATVNLVRDFKTSAMKGGFALKTGRLHANLKSRRRRTVTATRAPFAVPPVSEPLTPAFITPAENSAPFAVPAVEDAPAPTGQVRVAETVAGSATAAPDALTGTAIDTRKPPSVASHVQNGGSLPARPVRRVKEPARGKAVAKRPPLLTRRAGAAATVSRAESSESPAPSSSGDDDVLLTPEALTKELRVAPRLLSDGRVSGSKKSAGRGVKVAGDAGAAGGSTAVAVDAVGDQRSSSNNNNNNGKNSANPKTASGRIRGIGAAPRDVVLAIVRASLLTSAPQPLSVADLCARVAVRLPQTEGAITPGVLADILSNAPDTFRVVTGLVFMNTNATKPLRQREPKIALS* # PASA_UPDATE: g5290.t1, single gene model update, valid-1, status:[pasa:asmbl_9616,status:3], valid-1 NODE_838_length_17090_cov_40.7878 . gene 2693 5923 . + . ID=g5290;Name=g5290.t1 NODE_838_length_17090_cov_40.7878 . mRNA 2693 5923 . + . ID=g5290.t1;Parent=g5290;Name=g5290.t1 NODE_838_length_17090_cov_40.7878 . five_prime_UTR 2693 2786 . + . ID=g5290.t1.utr5p1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 2693 3006 . + . ID=g5290.t1.exon1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 2787 3006 . + 0 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 3174 3310 . + . ID=g5290.t1.exon2;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 3174 3310 . + 2 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 3560 3694 . + . ID=g5290.t1.exon3;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 3560 3694 . + 0 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 4043 4325 . + . ID=g5290.t1.exon4;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 4043 4325 . + 0 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 4504 4619 . + . ID=g5290.t1.exon5;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 4504 4619 . + 2 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 4824 5239 . + . ID=g5290.t1.exon6;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 4824 5239 . + 0 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . exon 5526 5923 . + . ID=g5290.t1.exon7;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . CDS 5526 5739 . + 1 ID=cds.g5290.t1;Parent=g5290.t1 NODE_838_length_17090_cov_40.7878 . three_prime_UTR 5740 5923 . + . ID=g5290.t1.utr3p1;Parent=g5290.t1 #PROT g5290.t1 g5290 MVSSVLDTIVLPYTHTHTANLQSSVGSANASGSTRTVDRMGIPTRLGERAKQWCVDVKNNFNLNEISGAFGDMGTFMPLLVGLVAKNGLNFGSAMFFAGTFNIITGMFFDIPMTVQPMKAIAAAAIKEDLPLGQIYAAGITTSVVVGLLGLTGLINVFNKWIPMPVIRGVQLGLGLGLVNKGIQMVVGTNTWTGADSIPVGIACYIAIALLWYQTVIPTALVLFVVGIVISAVKGHHSVHVGGWDPSVQHLTWDDFKKGFTSMALSQIPMTTLNSVLAVCRLSSDLFPSEKAARPVRVSMSVAAMNIIGCWFGAMPMCHGAGGLAAQYRFGARTNVSILFLGSVFVLVAVILGDSLFSIMQTFPNSVLGAMLAVGGLELCTASRDVKTKDEAVVLFVTACTVMTQNTFQGCVAGLACHVLLILAAKLPLRGEKPECVAPSASGAVEEGSGGAHVVNGASEPVVVRKGYTKLPGSARDVDGVDDDALSGGAGSDDVYFAQTDLADRG* # ORIGINAL: g2688.t1 original gene structure, not modified by PASA NODE_4357_length_1749_cov_197.427_potentialcontaminant AUGUSTUS gene 704 1210 . + . ID=g2688;Name=g2688.t1 NODE_4357_length_1749_cov_197.427_potentialcontaminant AUGUSTUS mRNA 704 1210 . + . ID=g2688.t1;Parent=g2688;Name=g2688.t1 NODE_4357_length_1749_cov_197.427_potentialcontaminant AUGUSTUS exon 704 1210 . + . ID=g2688.t1.exon1;Parent=g2688.t1 NODE_4357_length_1749_cov_197.427_potentialcontaminant AUGUSTUS CDS 704 1210 . + 0 ID=cds.g2688.t1;Parent=g2688.t1 #PROT g2688.t1 g2688 MASMAPPSALTDMDQSLEIAKQFESAAAAEKVKETEAFLAKMKAFDKLSEASRVLVFYLVEEIQSVLADPALSKQQSIVLERYSEMLAGGESIKKHRVDYLHKLNGPIQPFCFVQKLFRERGIDLREVTPNNVTVFRTQQQPTPSTQTVQPKRNTGGQWRREYFKPNY* # ORIGINAL: g8735.t1 original gene structure, not modified by PASA NODE_3421_length_3510_cov_22.4713 AUGUSTUS gene 2 3510 . + . ID=g8735;Name=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS mRNA 2 3510 . + . ID=g8735.t1;Parent=g8735;Name=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS exon 2 1353 . + . ID=g8735.t1.exon1;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS CDS 2 1353 . + 0 ID=cds.g8735.t1;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS exon 1632 1861 . + . ID=g8735.t1.exon2;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS CDS 1632 1861 . + 1 ID=cds.g8735.t1;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS exon 1957 2505 . + . ID=g8735.t1.exon3;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS CDS 1957 2505 . + 2 ID=cds.g8735.t1;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS exon 2614 3084 . + . ID=g8735.t1.exon4;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS CDS 2614 3084 . + 2 ID=cds.g8735.t1;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS exon 3184 3510 . + . ID=g8735.t1.exon5;Parent=g8735.t1 NODE_3421_length_3510_cov_22.4713 AUGUSTUS CDS 3184 3510 . + 2 ID=cds.g8735.t1;Parent=g8735.t1 #PROT g8735.t1 g8735 IDLPYALKPASIPSSIVGTDKSGYQKTIDTMIVSFSNAADVPCVRVYGLGSQDSSTFSLTVVGLCPVEGATMIIRATPTVAGGLSARHPLANVTATIRLYVVGTPAPFGCDLSKGDVHKPTDKSALTCDACFPGFYGPACEGEAPCQINGTITQGLSRRPFADRRCRVSMSVDMSAAKTITVNTPWTLNVTFGRPLNTSRSAVYLRLTPFVWDSTDFSVALNASSAFTLQGNGTSADGTDITRPGRNSSIVALSKVAVGTNLTFLQPFDTVKIMVVLASADPLWNGSYVDFAVVVKDCPLGWYGDRCQNACTPLSSCSLVACSFPRVAKCVVDTCAVGQFHNGSGCANCTKISNCAMTMCSAASASSCIRCNSGFYGSQCDKKCRAVANCQGTVTCSERSASACNLCFDGFSGPYCKPVDNNPINGGWTPYAASGNCTKNCGGGIQLYERWMCRNGTVVPTVAAPAALAVNCSGGQLIRANATCANLCDCSKPTCAVPTCNWGESIVSYPRTPTTGCCPIRVCVRDKVISESTVTFQGNGYLRYTSPRLRIDTNITMQIQTRATDAIVLAETGTVPADAIVIQLTSGKLDFRVNAGSGFVSVATATAINDGLWHTVEAFRDKTVIRLKIDGKQVGEKAMGTLTAVDNLQDVFVGGTTNASSVITGGFLSTKWFVGSLRSFTYNTTNMLLTSATLNATNVLWSCGPANRTSELTMQMTTSKARADFKFVRPVVALSSLSFSFKLSGLSSGPIFTLQDDSKANLGFKANGSHVTVALDRQGKVQSLAYPVVVVTNEWHSVRLQMSSLSLLLSVDNGTSTAMSPGYSFAPATAVFGGSPGFLGFAGAILMNNRTFVLNGTTNSTDIRTECGASVLAVTSVSNDKSLLSLGNGKLSVAVAVSNPLQSDAMLSVQTLSGTAYAYDYFYPVVKNVSVVPGSSFVNLLVDVNPIQMKSSDPYFVVAVSNTDLGEPVKEPVFGS # ORIGINAL: g10663.t1 original gene structure, not modified by PASA NODE_1653_length_9972_cov_41.1885 AUGUSTUS gene 5401 8722 . + . ID=g10663;Name=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS mRNA 5401 8722 . + . ID=g10663.t1;Parent=g10663;Name=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS exon 5401 7313 . + . ID=g10663.t1.exon1;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS CDS 5401 7313 . + 0 ID=cds.g10663.t1;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS exon 7454 7509 . + . ID=g10663.t1.exon2;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS CDS 7454 7509 . + 1 ID=cds.g10663.t1;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS exon 7737 7861 . + . ID=g10663.t1.exon3;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS CDS 7737 7861 . + 2 ID=cds.g10663.t1;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS exon 7973 8722 . + . ID=g10663.t1.exon4;Parent=g10663.t1 NODE_1653_length_9972_cov_41.1885 AUGUSTUS CDS 7973 8722 . + 0 ID=cds.g10663.t1;Parent=g10663.t1 #PROT g10663.t1 g10663 MTRQHDALRRGTVRSSTSVESAHRVGRSARHTALVPTVTEAVDAAAHKWKPPVDHAGAAKPQFAPHALVCGFVVACVVNELLGRSANSTLFAAAFAYCVAVAIVGRQDDAITARMRTCFSAVAVVAVALGTRSVVIGVAVALSASTYLWCGDVIIYNDLMPFAAIASPPHMPLPERPLPDVALRSASFIYDAQHGGRFCAVALFLCIFTADGGLSIPAIGCCIASMGVCAVCTWKGYRSPIARTALMWSMLLSAFVTLQQWHAHASLTTSALCASVTILATAWTLRGPGTLSASLVGLLLPLRSAPAVGSTDEVLPLRMPSTSQDGTDGAPDVHPPRDAAAAHVALALCSTICALLTVDGCSGRMYAVVRAFVGMVYTGHLCMSPAVSVAVGGLNALTVVWALGLSLTHDGWASPPALAACIALIGTGCIVGRFVATSPRGAAEAWLRALLLLSLGSVLGSGAVHTRLPETESGDCTVSSAAIACFAVACACAPYVVVALRDDSNGPSRMQWTAARATSQRILTSLGVALFTFVASNALPVVGHDHRLQSNVVTWAVLHGAFVVAALHSDGDLRAHVMRSVAGRVVVAVSAGVFAGVIVACIRAQSIRDGSPWLPIPLALVAATTTLSFLSRRHARAWDPLVTSTAALGTGAVALIGPVHDTISMCAASTACILLLSCRPTGLAVGLPVRGTTGMGTQYALPVKERAFAAVAALILFIKIELRLPDPLAVIVAVAVVCAVVQQLVDIENSTFVLFAKRISSFIGLARCASYFCVVVLVSASGTPLSAVARLLGDGLKKPLGTGGIDRDSTSLFATTAHGLHLASGMSLEDVAQTAHSLWGALASLAVQCALAVLPLFLSYNPNTNPNLWSPRILLTRAAATHNQPHGRRPRDRRGSPPSLLVAGGNATLSMLWSPALLLTVLWSRFGALRMLAAYLLAELVALSAWQ* # PASA_UPDATE: g10664.t1, single gene model update, valid-1, status:[pasa:asmbl_2244,status:12], valid-1 NODE_1653_length_9972_cov_41.1885 . gene 9172 9945 . - . ID=g10664;Name=g10664.t1 NODE_1653_length_9972_cov_41.1885 . mRNA 9172 9945 . - . ID=g10664.t1;Parent=g10664;Name=g10664.t1 NODE_1653_length_9972_cov_41.1885 . exon 9943 9945 . - . ID=g10664.t1.exon1;Parent=g10664.t1 NODE_1653_length_9972_cov_41.1885 . CDS 9943 9945 . - 0 ID=cds.g10664.t1;Parent=g10664.t1 NODE_1653_length_9972_cov_41.1885 . exon 9172 9621 . - . ID=g10664.t1.exon2;Parent=g10664.t1 NODE_1653_length_9972_cov_41.1885 . CDS 9370 9621 . - 0 ID=cds.g10664.t1;Parent=g10664.t1 NODE_1653_length_9972_cov_41.1885 . three_prime_UTR 9172 9369 . - . ID=g10664.t1.utr3p1;Parent=g10664.t1 #PROT g10664.t1 g10664 MDIPIDLRVELLKDSPFPKGILRSKASGEPPLILATTVLLAVQHAVAAARADAGQPPVFVPQNTPLTIDVIQQSCGTEVSQLSY* # PASA_UPDATE: g10661.t1, single gene model update, valid-1, status:[pasa:asmbl_2243,status:12], valid-1 NODE_1653_length_9972_cov_41.1885 . gene 173 436 . + . ID=g10661;Name=g10661.t1 NODE_1653_length_9972_cov_41.1885 . mRNA 173 436 . + . ID=g10661.t1;Parent=g10661;Name=g10661.t1 NODE_1653_length_9972_cov_41.1885 . five_prime_UTR 173 173 . + . ID=g10661.t1.utr5p1;Parent=g10661.t1 NODE_1653_length_9972_cov_41.1885 . exon 173 436 . + . ID=g10661.t1.exon1;Parent=g10661.t1 NODE_1653_length_9972_cov_41.1885 . CDS 174 335 . + 0 ID=cds.g10661.t1;Parent=g10661.t1;5_prime_partial=true NODE_1653_length_9972_cov_41.1885 . three_prime_UTR 336 436 . + . ID=g10661.t1.utr3p1;Parent=g10661.t1 #PROT g10661.t1 g10661 ACAACNIELKSGHLFECERCRGVFCGDCDAFIQDVLHSCPACEASAPSTATVT* # PASA_UPDATE: g10662.t1, single gene model update, valid-1, status:[pasa:asmbl_2242,status:3], valid-1 NODE_1653_length_9972_cov_41.1885 . gene 596 4725 . - . ID=g10662;Name=g10662.t1 NODE_1653_length_9972_cov_41.1885 . mRNA 596 4725 . - . ID=g10662.t1;Parent=g10662;Name=g10662.t1 NODE_1653_length_9972_cov_41.1885 . five_prime_UTR 4520 4725 . - . ID=g10662.t1.utr5p1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . exon 4375 4725 . - . ID=g10662.t1.exon1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . CDS 4375 4519 . - 0 ID=cds.g10662.t1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . exon 4001 4215 . - . ID=g10662.t1.exon2;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . CDS 4001 4215 . - 2 ID=cds.g10662.t1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . exon 1247 3693 . - . ID=g10662.t1.exon3;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . CDS 1247 3693 . - 0 ID=cds.g10662.t1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . exon 596 1024 . - . ID=g10662.t1.exon4;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . CDS 850 1024 . - 1 ID=cds.g10662.t1;Parent=g10662.t1 NODE_1653_length_9972_cov_41.1885 . three_prime_UTR 596 849 . - . ID=g10662.t1.utr3p1;Parent=g10662.t1 #PROT g10662.t1 g10662 MATRHYSAARHPMRSSANSPAVYLLITALVGFAMAVAASAAVQGLAVADSLSFGVEMEFAGAGKMRVAHINDMPAENYERVLRMVASAIVGAEAADSIAIEHRINSVPHPKYPDSQPPRKVRTSLWTDPKGRTWRVTSEYVTAHGVYDGYEVVFPPLTDPAEAQAVAQALWYSEVLTAGVKSATHVHVNGTCLVSSSSNEASALGVVNMFLMHEQYEPLVRRLFRTRHLGGSRNPFSKGVSDVHAGIAEELSALPASERTVSAVRAAFDRRLDAEMVYVGLAQEANAEQAQMGDAAATESTDASMERFNSLKRVWKYHSLNLANLVPINPSIPPRKMTVEFRAFDLLPPSVVRLAVDFTRALVGRACDMAARGEAFVLGGELPRVPEGGEMSIDLLPTDPAALRAMADELLATLGLSSDEFAPLLESLSATAIGGTVFDIEHEVLMANWNHGRKSALPYVAPSAANSKRGIMRREARDSRFETEEVPAPAKRSSEDFFEIAQLTSTFHCLPNPCENGGTCVQEDKGKGVECICPPGYYGFFCEISFTTSTMSDGPTPSASSTFTPTHVFTSTQSITSVTTEASSEHVTPTSTAETSTVTSSTEAAPTSTITPPESSQSSRPLASSSAVVSSSPIVSSSAAVSSSSVVSSLPASSSSSVAALSSPAVLSSSSSLAVSSSPVESSSSSPVEPSSSAVLSSSASSQPSPVVSSSVAPIESPTSTPTPAPSSSPSSAAVPVPSSSASVVASSSSTAAIVEPSTSSEPPETSVPPVPVPTTEAPVPPSQNQLANAVTATFANITSEEFQSSFAGPFKDTVAALVNNATGGARRRRDTVSPSDVTIVSIVNNGNGVSVVFYIVSGSSAVSSAVVVGSLSSAADAFAAIGLALLSVAATPLGNNNSSSSSNAVAIGVGVGVGVGGALLIAAVAGYVIVNKRKSAGKYDVRTGQASGAVGKGGESAVAGTSEALAVPKTEKSQWWSNWFWTDFSSLQESPV* # ORIGINAL: g5250.t1 original gene structure, not modified by PASA NODE_3445_length_3448_cov_41.4714 AUGUSTUS gene 2529 3328 . - . ID=g5250;Name=g5250.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS mRNA 2529 3328 . - . ID=g5250.t1;Parent=g5250;Name=g5250.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS exon 3209 3328 . - . ID=g5250.t1.exon1;Parent=g5250.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS CDS 3209 3328 . - 0 ID=cds.g5250.t1;Parent=g5250.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS exon 2529 2984 . - . ID=g5250.t1.exon2;Parent=g5250.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS CDS 2529 2984 . - 0 ID=cds.g5250.t1;Parent=g5250.t1 #PROT g5250.t1 g5250 MMFLEKSTSNHLAYPGDWLPHFTRSVVTVFLMEMTVDWIKHTCVSAASSDARIREVYIDFRGRLTAPFRDAPKLGLGLARTKDMQHFDFVTLPTTCVLLRLGLNCAEQLAWRPVDGSVWHGIAFFVVTFFGLCAAKVAVRQFLRQNARRVHARATGKAFLARHNSTSIPALIMEAVRQSSSQEDLSTRRRR* # ORIGINAL: g5249.t1 original gene structure, not modified by PASA NODE_3445_length_3448_cov_41.4714 AUGUSTUS gene 1 1575 . - . ID=g5249;Name=g5249.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS mRNA 1 1575 . - . ID=g5249.t1;Parent=g5249;Name=g5249.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS exon 1 1575 . - . ID=g5249.t1.exon1;Parent=g5249.t1 NODE_3445_length_3448_cov_41.4714 AUGUSTUS CDS 1 1575 . - 0 ID=cds.g5249.t1;Parent=g5249.t1 #PROT g5249.t1 g5249 MMDRGEAASVWALVVSFVVALLARSAHSAPASDQLVDRLKSLNFANSGTVRATDKFVYGIDSCYYLETDESFDTVNQCPYRYLVNPEGTCQASSVAQGTYFEAGSDVGAVSLAVAAIDSSAAHSCAKVCCGEPGCRAWMLFTATTPTFNCDAGSICCLLKGRHMTPMPVVASNDMRRIQPSKPSLYYTGSISSTVFSSPPLGIRSAVPLGGVAAGNFELRADGTFATWTIMNESPASSGKTPTMADASLAVRAIPANGGESRPVTRLLRTHAPVGDGLVGVKQMAYAGSFPVSRLHVEDDDLPLDVTVFAYAPYRNGDLQFSATPAVVFTALVTNPTTEPINATFALTLPPYGWTNTFRARDGSVPVASVSSAEDCARLCWKADPLNCSSWAVKKDECYLYDSLIPNSAALDGAHSGMRATWRVEPKEAGITYVSDSPGAECGPHYGGITLRAVETERARASYGVAASLSQMFGDLSRDGELVINDVGADTLSAKGAAAATVTLQPGETLPLSIVLAWHFAARHF # ORIGINAL: g7201.t1 original gene structure, not modified by PASA NODE_962_length_15402_cov_41.3228 AUGUSTUS gene 13960 15321 . + . ID=g7201;Name=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS mRNA 13960 15321 . + . ID=g7201.t1;Parent=g7201;Name=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 13960 14014 . + . ID=g7201.t1.exon1;Parent=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 13960 14014 . + 0 ID=cds.g7201.t1;Parent=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 14210 14516 . + . ID=g7201.t1.exon2;Parent=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 14210 14516 . + 2 ID=cds.g7201.t1;Parent=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 14760 15321 . + . ID=g7201.t1.exon3;Parent=g7201.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 14760 15321 . + 1 ID=cds.g7201.t1;Parent=g7201.t1 #PROT g7201.t1 g7201 MASSRNDRADRLDYFYGLVKLHILARQSPTTGIIDSSSEAERPSREGNVRENVYALTTVWALAIAYRSIDDDRGRRRELEYSAVKGMRGLLWSMMRQASKVEDFKRTQSPGSALHAMYDVRTGGPVVGDDAWGHLQIDATSIFLLQLTQMVASGLSIIYTQDEVDFVQNLIFYVERAYRTPDFGMWQRGNKLNIGHPELNSSSIGMAKAALEAINGEGLFGKGLTTICTTHVDPDAHNRNRTILQSLLPRESSSKETDASLLAVIGFPAFAIDQVELREMTRRKILTELAGRYGCKRFHRDGHKTVLE # PASA_UPDATE: g7200.t1, single gene model update, valid-1, status:[pasa:asmbl_10144,status:3], valid-1 NODE_962_length_15402_cov_41.3228 . gene 11639 13216 . - . ID=g7200;Name=g7200.t1 NODE_962_length_15402_cov_41.3228 . mRNA 11639 13216 . - . ID=g7200.t1;Parent=g7200;Name=g7200.t1 NODE_962_length_15402_cov_41.3228 . five_prime_UTR 13064 13216 . - . ID=g7200.t1.utr5p1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . exon 12881 13216 . - . ID=g7200.t1.exon1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . CDS 12881 13063 . - 0 ID=cds.g7200.t1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . exon 12571 12691 . - . ID=g7200.t1.exon2;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . CDS 12571 12691 . - 0 ID=cds.g7200.t1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . exon 12248 12457 . - . ID=g7200.t1.exon3;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . CDS 12248 12457 . - 2 ID=cds.g7200.t1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . exon 11639 11905 . - . ID=g7200.t1.exon4;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . CDS 11784 11905 . - 2 ID=cds.g7200.t1;Parent=g7200.t1 NODE_962_length_15402_cov_41.3228 . three_prime_UTR 11639 11783 . - . ID=g7200.t1.utr3p1;Parent=g7200.t1 #PROT g7200.t1 g7200 MKMQATGYLVVLVMCVAGAAAVSFELPGASQKCFKEDVHKGLLISGSYHVSEGENQRIDILISDSQGFRIWAKTGAVSGRFSFAPDEEDTYELCFKNVVEEGAAANADMKREITFTLSKGTAGARDYDEAAQAAQLRPLEVQLRVLEDLSSSIVHSFNYMKEREASMRDTNESTNSRVLYFTVFSMLCLMGLGGWQVYYLKRFFQAKKLIQ* # ORIGINAL: g7198.t1 original gene structure, not modified by PASA NODE_962_length_15402_cov_41.3228 AUGUSTUS gene 5389 7463 . - . ID=g7198;Name=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS mRNA 5389 7463 . - . ID=g7198.t1;Parent=g7198;Name=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 6429 7463 . - . ID=g7198.t1.exon1;Parent=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 6429 7463 . - 0 ID=cds.g7198.t1;Parent=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 5705 6108 . - . ID=g7198.t1.exon2;Parent=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 5705 6108 . - 0 ID=cds.g7198.t1;Parent=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 5389 5443 . - . ID=g7198.t1.exon3;Parent=g7198.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 5389 5443 . - 1 ID=cds.g7198.t1;Parent=g7198.t1 #PROT g7198.t1 g7198 MSDGATHGVPSNTASDGGADVSEESMLRAMGLPTSFTSSLKHVKRGAKRGRAECDGGDASASNRPPKKADNDAFLACTEQHPLEPKDGNDTSCMWTASPPCIHEGESGWLWFRRCVDPAVGSAFDASCIAPILWDDPSADILRSIDACDPALLREIADAKNAFQSASEEHSVSAFVRARSDANPFEYMRSGPFSNRAAVKLATLDHVTQITDTWEAIQPLHGNSCEEMGKDPLASFSFVDICGGPGGFTEYLLWSQSRRGMSTRGWGMSLRGVDCDWRMEKMHPIAKSLLSSFEITYGADGTGNVYCATNVECLARHVMEGTASRGVHVVVADGGFGGARDRHDQEDATFRILCAQISAALRCLAIRGNFICKAFDLATTRSLSLIWVLTHLFDAVTIAKPVTSRPASSERYLVCKRLRADAEVCASVSARLFDIVLRCGEGDDLCDGAAEASRIASVVESNAIATDRRFLEFMRQTNANLFARQLDASHAILRRFA* # ORIGINAL: g7199.t1 original gene structure, not modified by PASA NODE_962_length_15402_cov_41.3228 AUGUSTUS gene 8067 11598 . + . ID=g7199;Name=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS mRNA 8067 11598 . + . ID=g7199.t1;Parent=g7199;Name=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 8067 8097 . + . ID=g7199.t1.exon1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 8067 8097 . + 0 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 8305 8933 . + . ID=g7199.t1.exon2;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 8305 8933 . + 2 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 9091 9278 . + . ID=g7199.t1.exon3;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 9091 9278 . + 0 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 9413 9947 . + . ID=g7199.t1.exon4;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 9413 9947 . + 1 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 10098 10129 . + . ID=g7199.t1.exon5;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 10098 10129 . + 0 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 10271 10685 . + . ID=g7199.t1.exon6;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 10271 10685 . + 1 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 10829 11244 . + . ID=g7199.t1.exon7;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 10829 11244 . + 0 ID=cds.g7199.t1;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 11580 11598 . + . ID=g7199.t1.exon8;Parent=g7199.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 11580 11598 . + 1 ID=cds.g7199.t1;Parent=g7199.t1 #PROT g7199.t1 g7199 MWVLVNAREPVGRKDCDLLFSSDKSVSRVHASFTVTPVAKEAIRNVNARSALTVIDKRSSFGTHVNGERLAPEVSRDLAEGDKVSFGGADSVVQVTWVPYVFCCSGIPPGRVAALEAKIATFDGRLSDQWTDACTHLVMIELNVTQKNILALIGNKPTVMPQWIDEALARNNATTWPDVDSFLPPLRMSIKLPPSVSFLPDPRRKTVFSGLVFHFVSVEQMRNNEPQIVAGGGRVVLVDGTFSVAEAKALSAGDRLRLIKHHTKYTLACAPEVYEVLERGLECRGHRLLREDEIGWAVLFGSTAEKCNPQSRGRDAESYRGETQSQHPNAPNHNNAVPRRPAVSMSQTLAPHGSHEDGHAGVSGMKQKGKAQSSTSGVGSSAAADFQTVQSPPANFLSRDNSTPIAVGPPAGRSIDGDVPMAVDAAPAPPLQPANIAHEDQRCDRNRLPTRNADLAVADAAAVKDVTRENKRPSDEVDEADEMNRKRIRLGKQPDTQPIAVSVTATVADEGVVPMDTTTHMYGGSDEIESGPLDAEGKAAASVGLQAANAGPSVNGGARDHAGDPAPRQYFEPATPSLVSVSFVSLIRPAVAQAVNVGANSSSNVKKFKKAYYVGLGSTHNPLPLDRPVVEARPRAEPREMRWANEEPKPKATQAPMLQAPAQAPAQAAIQSMPPVQSAPAAVEPSGPSTAAAVNASQAAPTAAIAKRVAVQSQLQFRANAQSQASAAGDAASTQRGDRAPELGAALFGNPIVC* # ORIGINAL: g7197.t1 original gene structure, not modified by PASA NODE_962_length_15402_cov_41.3228 AUGUSTUS gene 290 4288 . + . ID=g7197;Name=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS mRNA 290 4288 . + . ID=g7197.t1;Parent=g7197;Name=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 290 412 . + . ID=g7197.t1.exon1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 290 412 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 715 784 . + . ID=g7197.t1.exon2;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 715 784 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 977 1108 . + . ID=g7197.t1.exon3;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 977 1108 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 1255 1349 . + . ID=g7197.t1.exon4;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 1255 1349 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 1519 1614 . + . ID=g7197.t1.exon5;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 1519 1614 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 1902 2045 . + . ID=g7197.t1.exon6;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 1902 2045 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 2208 2359 . + . ID=g7197.t1.exon7;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 2208 2359 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 2589 2713 . + . ID=g7197.t1.exon8;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 2589 2713 . + 1 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 3019 3081 . + . ID=g7197.t1.exon9;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 3019 3081 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 3256 3323 . + . ID=g7197.t1.exon10;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 3256 3323 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 3542 3734 . + . ID=g7197.t1.exon11;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 3542 3734 . + 0 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 3899 3991 . + . ID=g7197.t1.exon12;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 3899 3991 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS exon 4188 4288 . + . ID=g7197.t1.exon13;Parent=g7197.t1 NODE_962_length_15402_cov_41.3228 AUGUSTUS CDS 4188 4288 . + 2 ID=cds.g7197.t1;Parent=g7197.t1 #PROT g7197.t1 g7197 AEAFLLMATSESDEDDSKGMTCMGLIGALNTLLYHLSEEEEALKAIEPVVLEVLSCVLVGQINLDYIEEALESMTLLVQGVKGVSPRMWELVSLLIEGFRTEIFDFFDEISTVLRVVMLHAGDSPQTPAFVQLVLEMCQVVFNSTDAGFHAWARAANVMMDTINFFPGKMDNLIIPMMEVALPRALLPVTPPVTDPNDTQSAAKALMFAQSKFRWDAILVGVAALRYAQDAVLSYLHSKNIAHTFMDELFSTLLAGCEGYRLKKVLAVELRCADVRMSVQVLASIARAGNEFSAKALSVCLKLLEHTKALDDEYAELSQREYEEDAHSLIEDDDELSDGDDAHDHDDDEYLRALTRRAAKYAGANGGDNEEEGGETNENDDSQSLDSYLLGVDYDEENYVCEVGPFKDVNPFTDFVRILEHTDVTPLIASAEDAESYTKMITIGRKFIAAEEAKQQGAFTFNPNAQVSTDFSGAAGSSGFQFSQ* # PASA_UPDATE: g9847.t1, single gene model update, valid-1, status:[pasa:asmbl_5713,status:12],[pasa:asmbl_5714,status:12],[pasa:asmbl_5715,status:12], valid-1 NODE_3202_length_4031_cov_40.1069 . gene 2146 3649 . - . ID=g9847;Name=g9847.t1 NODE_3202_length_4031_cov_40.1069 . mRNA 2146 3649 . - . ID=g9847.t1;Parent=g9847;Name=g9847.t1 NODE_3202_length_4031_cov_40.1069 . five_prime_UTR 3322 3649 . - . ID=g9847.t1.utr5p1;Parent=g9847.t1 NODE_3202_length_4031_cov_40.1069 . exon 2146 3649 . - . ID=g9847.t1.exon1;Parent=g9847.t1 NODE_3202_length_4031_cov_40.1069 . CDS 2146 3321 . - 0 ID=cds.g9847.t1;Parent=g9847.t1 #PROT g9847.t1 g9847 MAAPGAGFQTPHRMGTFANWIELTSDDDSGGVSATAHFSFTPGVDGDFGKTALFSSVVKKSQAVSSASDHEPQSADAPIAHADSFSFSFTDNATHTHAPVASTNISLSVRFTLASSDPDSDAVAVPVDALLNGFSINMRCDPSKQVAPDVCNSNASWPIRFNVDLHDCVNSGTDKGAELTCRFEFEFVRGWTPTDGGGKSFNYALDYAVTVHAIVFTDVASDAQSPTVRCVDQEKITIRSNIYETPKGQSLRAVCADDRKGVRVHAGTYASGIVGIKAFGFELLETDGFANRGRYLERYQYAVEQGHFDAEACALDYTAAMGVVASHTVFPSKADFWMRTSLVVFSSESGVSVSPFKPIEGEVCRSAPDGFSCARKGLVERTAVDVTVAVL* # PASA_UPDATE: g9846.t1, single gene model update, valid-1, status:[pasa:asmbl_5712,status:12], valid-1 NODE_3202_length_4031_cov_40.1069 . gene 123 1904 . + . ID=g9846;Name=g9846.t1 NODE_3202_length_4031_cov_40.1069 . mRNA 123 1904 . + . ID=g9846.t1;Parent=g9846;Name=g9846.t1 NODE_3202_length_4031_cov_40.1069 . five_prime_UTR 123 123 . + . ID=g9846.t1.utr5p1;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . exon 123 211 . + . ID=g9846.t1.exon1;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . CDS 124 211 . + 0 ID=cds.g9846.t1;Parent=g9846.t1;5_prime_partial=true NODE_3202_length_4031_cov_40.1069 . exon 427 602 . + . ID=g9846.t1.exon2;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . CDS 427 602 . + 2 ID=cds.g9846.t1;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . exon 826 954 . + . ID=g9846.t1.exon3;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . CDS 826 954 . + 0 ID=cds.g9846.t1;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . exon 1188 1904 . + . ID=g9846.t1.exon4;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . CDS 1188 1769 . + 0 ID=cds.g9846.t1;Parent=g9846.t1 NODE_3202_length_4031_cov_40.1069 . three_prime_UTR 1770 1904 . + . ID=g9846.t1.utr3p1;Parent=g9846.t1 #PROT g9846.t1 g9846 EGMFEDGITLLTKAISGDKTKKSYYINRGDCFRAIGCLDFAIMDYREALDLDSVDWTVRVRCALIHYDRGVEQFDSQDYYAADNEFTKALAHRTQDIDLDLTCRLSLQAIEYNPLVVKFHIGRARSRYHLSEFDGARQDFLNALAVDHDDPEIVPLLAQLFPGENLAGVMSKCRVSLPSVGIPSVAVLDARPRMSTKPASQPKAHHTAVGTHDGHEFGRAHVPAIPQHTHVHAHTHSHGHGNEIAHHAQHHHHHTAHSAHTGGSGGMGAKDPAKLLMSNRMWTAPERARSVSPQLFITAGIPSHPTATSTALAARKASQLGSLT* # PASA_UPDATE: g1437.t1, single gene model update, valid-1, status:[pasa:asmbl_4509,status:12], valid-1 NODE_252_length_29189_cov_41.3593 . gene 13451 25732 . + . ID=g1437;Name=g1437.t1 NODE_252_length_29189_cov_41.3593 . mRNA 13451 25732 . + . ID=g1437.t1;Parent=g1437;Name=g1437.t1 NODE_252_length_29189_cov_41.3593 . exon 13451 25732 . + . ID=g1437.t1.exon1;Parent=g1437.t1 NODE_252_length_29189_cov_41.3593 . CDS 13451 25732 . + 0 ID=cds.g1437.t1;Parent=g1437.t1 #PROT g1437.t1 g1437 MLEKYLSPVLMSFLDKYVRNITPEDLGVSLWQGDVVLRNLELRLDVLERELKAPIRFQSGKIHELRLHVPWTKLASQPVEVTINTIEFIVTSRDADEHSAPPPAQKDGGEASHAPGMFGADATPDWQSDETSPGYISSLAQKIANNVSLRINNLILKFIEGDMVVSFSAKTIALRTTDGRWAPAFAEILLPNPALHRRLELFDVTLCVDRRGAAGKIDVYQDPLLYRTSLECRIRTRYDPATLLSPTGPSTTETRIDVHCGHLAWSVSDQQVPMLAALYNRFWDVYYAHQKPPVRPFKKHSSPGGEDRSDESSSGEDDDDNVDDEAAVSGTAEAHTSCVDGVAADDVGADAEKAADEEGGWMDWAWSVVAGDAPKGHPHRAHAHARSSAGGKAPSTLVLAIHVNRATIALKIMEAVRPGGYPGQTAHGHFASHAVDVGAAGASATTIAQLGRYLSRQIAVVVLAGIGVTISRTPLLLGVEMTIASARGEYEVAGHGYAQSFTTTPAAPASPTPAASDAFRQPFLSCGTRSAGDSERLRGSLFDSSGDANSTGSLNAETTGKGDDRSAPKAFDEALRMSYSAPLGAAKVRSRGGVRAEGAKIRLLVGSVSLLVDLPFSALIRAFASYAPPSGTLARLQSSRGDMQSRPDPRFLRKHVARIKRAIEKGAVREIHISVHGIHMTVPFADDLAAALLDGCVSQGKHSAHRPRAKKAHQAGTSAARGGLTAVTPGRTSVYDTDGESLPVRASPEIPAVVIVLPRLDAHVTNLSQVTPIGTHFASLLNAAPISAWVKAGAGHLVPQVCMETVVRITDLGFGVGLARVDAGGTIAFGGPNVRNVFISRPIAGSAFIRSSSLKPVWHDVSPSLDVRLEAPALVVSATSIHVSVVAGVLRSWTMGSAAQQALPSSGDRALLQSFTRTAVEMSLVQPSLPIEMVDLQVETIHARLCLTRLIAARSVSIGVASAAVVLGNTRRPLVSMHTWHGDDTHVPPRDAQAPQQPQEAPLLSLSVQVPRDWATADAESPFARAPFRPALFARVGALTLSWDPALCSWLAHAGSVVLPSVERHHATSTKAGRPSAAQARSARIRKNSGGFPARRSGGVIATHRDPLARLLAALPHAAPALHTSTPLVPRDRAADDSAAYSGTWQKARTFLVDVSIARVIVRADSGSTCAAVVLPAIVLRSAGDQLRQFADNGGEVPIVADEPARNLQPTMPWTLSVDGAAIWTQRTLPTGSTERRFILEPWSFDATLTAAVNTLRDSQQHAKAGAVSHNEFAVNTHVNVGPLSWILSQWQSETLLGTFTAAPDFLPAPLSIAFRALSARLSEGDLRSEDGSAPGAYGDNWESETVSSEGTGDETASGSSVRRAGSSWIGYVSLWVQCAAPRLGIVFLSDDSEESVEFAAEDSYISVDLDRGVLRTHVKVGTFLTTRRAGAAAASRMPLFGTEAVLFSSCDSQERFADGVVRADSAVGGVFEGGDPGPSASRPASPVRDTPQPPRAAFRAQGSSFISFSLVHNFMPTAAAEFMGDSRPLPGEVQISVRPFDVVLWGPSLALAVASTEPLLVGLRALLAADPGGQPDSSGGGLRSDGRHAGRSEHDGRGLDAGGANYVTVGLPALQLSCGRVRVFVPAVDGRGICLHVGSVAANSDPENAVSRTPLADDCAAAHVTGTRFSVASFSVTGEARSVFRDTQYVVDVSGIAVACCTPSDVRAVASREPLSLPPHSCTHELHGDQSHPAEFDSEPNPAHEWNMGARGIAAALPDGHAWIVAPFAVTTVLAPPVRDDPAVGPDGQTQWIYAAGVESSVRGDIACNITRDYVAYVAAVVRENLSWLGNRTAADGDPDKPRVRSRDRHRDSAGVPFELLVTCRKVRLSMFDSRPSPDAPLAPFVQFAVVQPIGSVRRVRGALPSAMFGCEDVAATMNDGSPAPPSVLSTSTSRNSRFSSDTQSERSPAFFSVHLAEAAVVIDVRKDVTVSLDDALVERVAAIVSAAVFAQHATSPRQQPGPSADEPEVSVPPTIARLSRVEFRTRQLEVVLSASSRSHSLSASLDSVHATLEPATISPSGGIPFLPGLNRVASAEVYGLAVRCRWPGSPQVSSCLDPCILRATADLAWTAVGGARILCVSARLSAGVVAVRLGKQSIDAVNCVVSALARAAKPASPVDSGNALPRDDLRAVASVPASSHQDRANCTVEPEAQPSQDDLRGGAFRFVFSETSRRPAVSEIVLVDTRASASRGKPSSDWPCSMTWRYSQARSLTSVHVTPVPFETAPEDGFARDLHVMCELRYYDAVREEFVPLQHFAVYQDAPARYDVGDAPAADEWQVLVNIPWALGHSDEYDTAVRAGVTGGGGENTVVGGGEASRGDKASNGRDGDESDVDGPRLSPLALIAAVRVDSKYCPSRAPRISIAAEIASLRVHLTNQAALLAGGWHGFAVPPSLFVHEQPLCDALLESVRLRGSLWRGGTAVVKVSSKLSLDTVCYRDLTRVAIVDPFEASAWVQSRPPVNGDGSRRVDAHVCCGIVAAQAGQTLLDLARASAQFWRSKPPVDPFLAHYVVCNSIHVPLRFGQVGTDESIGLDSLSACAYCWRTHRPGRTRAVHVSVGAGSDEWRWTDGLDIDAPGLRPLSLVWRGRRSVLWADVTRCDGPRRRIVLHGSHVLRNCLGVPLEYAVLQPQEARTPKHVTSVLPMDTIDAADVDTVSAEYCSGIVMPATQEEVSLLLPEDVSGWSVVVRAVGCLEWSEPIALGAVPPSDSVTSRSVCIPTEAGGALHACVSVAREHGEGVDGGVVACGETGPVRCAVWLVPPIVIENRTRCALAYELVGALAVDEAGGVSSNALVCAAAGSLGTRMAERATVCSVGSPGKTHAIRFRFLAENEHRQQLAWSPTLTLDPSPSSETLHGDAHYGRSVAVPHPSHTDGVELCVVTAPSYDLPGAVAVSLCTPWCVRNKSSAPIYVTAANLERGVLVPPHSRMLAHSFGPLFDTSAHHIRIGLVSRRQSIEADGPIVWSREFSATGHATEGNADGTGGAAQCSPSGAEMPAPDVPTEHVVDVVLPDAAWRFVVRVSGGDAGGCAGCGRVLVVCDAFVVVNCTDGLLRVRQEVPREVRVYAVPPKGLVALNGWPRLPMRDGAADPVSDGVAFAALIRVSFGDSIGDDPGTWEWGSAVDISRYTVREPYVVRSLVSGSRSLAYGTCDVGGVLHTLFFVNRSTLSILRNECPFPVAFAAGRTTQRSLLMPGGWCHHDVFTGPPPPTPHGAADVRRASAAASAPSSVGGEAQVGAEDGLAEDGVVRPARVVLEVSPVRDGPSSPRDVLASVDLCAVGRQPVGAGVVAIVTRRSLGTTVTFCLDAAGLGTEGCDAPPRGPILNVSAAIAGIALSLFDDSVGWRRGTMRADSSSTRAPPQASGGSYARQQSTQALSTELVRISLDGVSVSLGRTRDTGLNCGEIVRTVTVTVDGVQVDNQLLDSECEFPVVLYADLSGLQLGPDGPSKALSLTVVSTEAPPGGDERSVFRRVVLRAAPIVINIEDKFVFRLKEAVDVLADLTSTEHYLASAARNSSVDVPPFAEAAGNGGGAGPGTRGDDGDADESVSPGMIRAVCREPLSIDALDIGPLEAIVSVRTSFRLHIGVDHTPLSFSTLRLSRVFCDPSLLLETLAAHYAFEAVIRAPSLIGSLELLGNPTGLVFSVSTGLRDLVVMPLSGMRAGPVAFISGVGGGAASFVRHVGAGALSSIASLTSGIARNLDRLAMDDTHEQWRRNARKDRPMHAAQGLGKGMLALGFGILGGIAGLVDQPVQAITRSSEAGAGVGSTAMDLAAGVGKGLLGCIAKPVGGAFELVAATSQGILQGAGVRPVPPPKMPPADDPLPPRPNCALKYAWKMLGTPNAWMDVIEVSAVGSSGQKHPGALVLATESLFFVSDSEDAIQQSLSVADIVAVDTSDPNPSLLAVVVVARGGAHGGEPSSQHQQQHQQQQSGGVPTQRRDSVHATPSAKGYNRRVVPQRESVSAFDTLLAGGIAGVGRQSSSGSRGQRGSSGPVAGGTAQRSVDSPRRPSLGHARFEFVVSPAIRETFADRLWTRAVDAHGQRDARRDPSARLF* # ORIGINAL: g1434.t1 original gene structure, not modified by PASA NODE_252_length_29189_cov_41.3593 AUGUSTUS gene 248 3187 . - . ID=g1434;Name=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS mRNA 248 3187 . - . ID=g1434.t1;Parent=g1434;Name=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 2903 3187 . - . ID=g1434.t1.exon1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 2903 3187 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 2699 2791 . - . ID=g1434.t1.exon2;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 2699 2791 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 2240 2368 . - . ID=g1434.t1.exon3;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 2240 2368 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 1848 1965 . - . ID=g1434.t1.exon4;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 1848 1965 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 1229 1497 . - . ID=g1434.t1.exon5;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 1229 1497 . - 2 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 650 919 . - . ID=g1434.t1.exon6;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 650 919 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 248 325 . - . ID=g1434.t1.exon7;Parent=g1434.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 248 325 . - 0 ID=cds.g1434.t1;Parent=g1434.t1 #PROT g1434.t1 g1434 MGKSKGSSSAPSAAAAPPATGSGGKGKGKAIATATPSAAAPAGKSKDAKKDKEKQADDDFIVFAGSKKAKAKAESPGPAAAGGSASAPQGQPEPKYVIKNWTGKTAVTQLNELCQRSKWHKPELILKQVSGGGHRVTVRLNKEDKTRQVRTLVFEPPNVYENGQEAKHMAAVFVLHRVNSHMPMHRVLPPDAKEYWLELEKQPKVDTEEYRWPKNGSDPFDQPRFVPDGVRQLRSRQEAAAVRQQERLADDRASRDSDGDAPPVRLSSELRESLEMLLRSMQAELDAANSNATERKRKHHQRHHGISHTGDTLSPDDLDALVRLGFVRAHAAEALAHTGSREDAIGWLCVHLPEQDLPAGLAPPADLRAEKHDAVSLAREYTARRIMEYGFPRRSVLAALVRTGDDEEAALALL # PASA_UPDATE: g1435.t1, single gene model update, valid-1, status:[pasa:asmbl_4508,status:12], valid-1 NODE_252_length_29189_cov_41.3593 . gene 4888 10549 . + . ID=g1435;Name=g1435.t1 NODE_252_length_29189_cov_41.3593 . mRNA 4888 10549 . + . ID=g1435.t1;Parent=g1435;Name=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 4888 5257 . + . ID=g1435.t1.exon1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 4888 5257 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 5430 8320 . + . ID=g1435.t1.exon2;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 5430 8320 . + 2 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 8551 8640 . + . ID=g1435.t1.exon3;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 8551 8640 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 8792 8896 . + . ID=g1435.t1.exon4;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 8792 8896 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 9049 9199 . + . ID=g1435.t1.exon5;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 9049 9199 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 9311 9579 . + . ID=g1435.t1.exon6;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 9311 9579 . + 2 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 9726 9794 . + . ID=g1435.t1.exon7;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 9726 9794 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 9969 10092 . + . ID=g1435.t1.exon8;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 9969 10092 . + 0 ID=cds.g1435.t1;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . exon 10320 10549 . + . ID=g1435.t1.exon9;Parent=g1435.t1 NODE_252_length_29189_cov_41.3593 . CDS 10320 10549 . + 2 ID=cds.g1435.t1;Parent=g1435.t1 #PROT g1435.t1 g1435 MMLSGKLSATVEPLEEGAATDATTTNEGAAADQRDARGERAGTDANDGGGEHKTELSPPPSPMNIRDIKESQFDGTRNVPPPKPSPRASEDAKIGKHGVKGMTATVAPTDLELTTPKISVDPLEAWKDEHHGSDNQSIGSSVASGQQKQRGGKRKAHGRRLAVETHADGGSVSSLDDLSRPASGRHAHKGRVRNSSAKSKASSEGSAEAKGVSRESDAAVGAAAGDAAVSPIAAEKRIVSELATVRQARAFVPLEVVTKKIASIVGDMTSMRQRHLEIVRGMEESFGDIETRTRSHYVAFVAALNEKHAAKAAALRAGLKQLAVEVRRRQGDADAATMSVRARSDELARENRDLLAKMQREHDEFKASTELRMADMSAQFDKERARITADAAGERSQANVAAGAEAESLKAALAESRAEIVRLSAALASGGGGVAASGGDGGRPTVRFADAEIERPPPVGETKIVEVYVPVPMASAPPPPLPPVGLSLEEAAKIEMEKKDLALRLEASRSDAESLRKAYEALEAQFRSVVAVVDAGGVAALAPAIDERIAAVEAPLEEARAAAQAKAEEVEGWEKAFRDEEGRAPRETDKALVRSIFDERDRMQKECERLEAEVTMLRNLAAGKGPVIAPAPQPPTADDAANALARVNEGLTARLAALAVENEKLRDIASSQPQGLDPEAVEAELRRSLDAQSQAYKAEIERLGVALAASSPQSASSASAASGSVVSAGDPEFRSRAAKAEAAVSAKAGEVSRLEQRVRELEEASLSALPVDAAAELRRAMERLSAVERDAAAVREAAAQKDAAIASLELQLDEAREEALLGGGGSGDGEGSTTADGMEMSMRVSSLEGRLKDALAERDALQTRMDEIEAAGGMSAAVLADIANDASAKDMIKRVQGEVAAAKKQTREDAQKIKSLTRDLRMAEVKATQAAQQAGAAVASSAGSSGGGGGGASSKDIMVMEKKLKDATKSLELHKARYEKTNKELEAANAALAKLQKEMRQLEEVAKKDHDEVERLTVAAASAVEALAKVQELQKELSALRKENQTLSENYKSEQTLRKKYYNVIEDMKGKIRVYCRERPMSQNEIKGGYKSVCAFPDEYTIVIDSQRGPKEFQFDQVFPHEASQEKVYEEVHNLIQSAVDGYNVCIFAYGQTGSGKTFTIVGPPHLPGIVPRAMDDIYATIEKNKHKFSFTVECYMLELYNDNLVDLLTTTPDKQVKLDIKKDAKGLVYVAGSVSRPARTRADMQAIFDEGTKKRHVSSTNMNSESSRSHLVFSVILESTNLQTGIVLKGKLSLVDLAGSERVGKTGATAERLKEAQSINKSLSALGDVISALSTGESFIPYRNNKLTLLMSDSLGGNAKTLMFVNISPADYNTDETVISLTYASRVKLITNDAQKNADNKEITRLKKIIEALKSGKSVEQAEMETAEAAG* # PASA_UPDATE: g1436.t1, single gene model update, valid-1, status:[pasa:asmbl_4510,status:3], valid-1 NODE_252_length_29189_cov_41.3593 . gene 10918 12862 . - . ID=g1436;Name=g1436.t1 NODE_252_length_29189_cov_41.3593 . mRNA 10918 12862 . - . ID=g1436.t1;Parent=g1436;Name=g1436.t1 NODE_252_length_29189_cov_41.3593 . five_prime_UTR 12812 12862 . - . ID=g1436.t1.utr5p1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . five_prime_UTR 12402 12408 . - . ID=g1436.t1.utr5p2;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . exon 12812 12862 . - . ID=g1436.t1.exon1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . exon 12340 12408 . - . ID=g1436.t1.exon2;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . CDS 12340 12401 . - 0 ID=cds.g1436.t1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . exon 12096 12199 . - . ID=g1436.t1.exon3;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . CDS 12096 12199 . - 1 ID=cds.g1436.t1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . exon 11420 11929 . - . ID=g1436.t1.exon4;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . CDS 11420 11929 . - 2 ID=cds.g1436.t1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . exon 10918 11134 . - . ID=g1436.t1.exon5;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . CDS 11031 11134 . - 2 ID=cds.g1436.t1;Parent=g1436.t1 NODE_252_length_29189_cov_41.3593 . three_prime_UTR 10918 11030 . - . ID=g1436.t1.utr3p1;Parent=g1436.t1 #PROT g1436.t1 g1436 MAVGKNKRLTKGGKKGQKKKISDPFSRKDWYDVKAPSMFTLRQIGKTIVTRTTGQKIAADGLKGRVFEVSLADLQNNEEEAHRKIRLVAEEVQGRNVLTNFHGLNFTTDKLRSLVKKWQTLIEAFVDVKTTDGYTLRVFVIGFTKRRPNQIAKTSYAQHSQIRAIRKKMFEIVNREASTVDLKELVAKFIPEVIGKEIEKACNRIYPLQNVFVRKVKLLKKPKLDLGKLLELHGDVTSEEVGAKVERKDFVEPAVLASV* # ORIGINAL: g1438.t1 original gene structure, not modified by PASA NODE_252_length_29189_cov_41.3593 AUGUSTUS gene 26227 29044 . - . ID=g1438;Name=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS mRNA 26227 29044 . - . ID=g1438.t1;Parent=g1438;Name=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 29042 29044 . - . ID=g1438.t1.exon1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 29042 29044 . - 0 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 28868 28950 . - . ID=g1438.t1.exon2;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 28868 28950 . - 0 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 28626 28774 . - . ID=g1438.t1.exon3;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 28626 28774 . - 1 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 27690 27742 . - . ID=g1438.t1.exon4;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 27690 27742 . - 2 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 27283 27384 . - . ID=g1438.t1.exon5;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 27283 27384 . - 0 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 27079 27149 . - . ID=g1438.t1.exon6;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 27079 27149 . - 0 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 26719 26903 . - . ID=g1438.t1.exon7;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 26719 26903 . - 1 ID=cds.g1438.t1;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS exon 26227 26399 . - . ID=g1438.t1.exon8;Parent=g1438.t1 NODE_252_length_29189_cov_41.3593 AUGUSTUS CDS 26227 26399 . - 2 ID=cds.g1438.t1;Parent=g1438.t1 #PROT g1438.t1 g1438 MCIGTELLDTTGTKKEPRYYIHYNGWNKGWDEWVYETRILKYNDENRRFMRELEENLRKSKSKVARVMPLKRKPGEEEVGKNLRKRGRTEDAAANQEESELQPAEVKIIIPEDLKRQLVDDWDFVTRQKKLVGLPREPTVEKVLEDFEKYASGRGPISADTLHEAIVGLIVYFDHALGTLLLYKFERPQYAELLERTPDANASTVYGAEHLLRLFVKLPALLADVRLTTEAATTLESIIADLLKYMQANAASMFMSEYDNASPEYARIAASG* # ORIGINAL: g5710.t1 original gene structure, not modified by PASA NODE_1336_length_11990_cov_43.1462 AUGUSTUS gene 121 2968 . - . ID=g5710;Name=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS mRNA 121 2968 . - . ID=g5710.t1;Parent=g5710;Name=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS exon 1068 2968 . - . ID=g5710.t1.exon1;Parent=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS CDS 1068 2968 . - 0 ID=cds.g5710.t1;Parent=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS exon 471 807 . - . ID=g5710.t1.exon2;Parent=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS CDS 471 807 . - 1 ID=cds.g5710.t1;Parent=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS exon 121 261 . - . ID=g5710.t1.exon3;Parent=g5710.t1 NODE_1336_length_11990_cov_43.1462 AUGUSTUS CDS 121 261 . - 0 ID=cds.g5710.t1;Parent=g5710.t1 #PROT g5710.t1 g5710 MDIIRAPSKRAADRDEEDQLARRDPDAALFSPKRKLSSPAVEDATTGKSPRQTNGIANGNHDNDNEAHGEDSGSDDEELSVNGDERALQRHGGGVVSYRWPLEDSRAPYYVVQSKIGRFLNYPGFHRNYEFTRRAAGREEREFLVRAKIIHAAQSGLSLVPVIPLEECLEMLKEQYPQHYERVMQAPNGEDGHADLKPIPRTPRSGQRGRKRRERDDDDEDAKDDSENGNNDSGSRGESAKKLRKIERETTDSLEDVDDEVLMAATQTHGGGMMSYRWPYEDTTAPYYIVQSKMGRFIRNDQLYRHHTSLSRRDAGTRERQFLVRTGIIRAAQAGLSSLQVLRLSDCLDLLKTHHPHLLRIFTKEIEDDRVDDAEIERERERAARRESKGALALGRLRDLVVADAPEDSRDTSDSRNDPELEMLMSAVQEHGGGMFSYRWPHTDPTASLYVVQSKLGRFISEEQLYRRYEHLTRRFASSTERQFLSRTRIITAAQAGLPQVCVLLLDECIELLRKDYPIHLQVFNKAIPSDAAIVGRVTAFPAGRRYVAPMPISRTANRRAFQAAKEVAEYNALVVQEAVGEGKRKLKPGFFDSGLGIVFYPQNHVRKLTPALSRPSLYPVATMMGQHETNFQRYTAEEAKKQPLNTIVVAPTWAPMTGTIHIDAVRLDLPATPVVPANVAGGATQTYTPQQQQQSQQQQQQQQQQPKTPGADSAAAVATPIQRPGTAGVKQANSTPVAVAAEQQSTTPGAKTAASGAPAVKGGPTSVGPKWVKTNAATDDSSEPDVKRGRGR # PASA_UPDATE: g5711.t1_g5712.t1, single gene model update, valid-1, status:[pasa:asmbl_1242,status:3], valid-1 NODE_1336_length_11990_cov_43.1462 . gene 4535 11727 . - . ID=g5711_g5712;Name=MERGED%3A%20g5711.t1 NODE_1336_length_11990_cov_43.1462 . mRNA 4535 11727 . - . ID=g5711.t1_g5712.t1;Parent=g5711_g5712;Name=MERGED%3A%20g5711.t1 NODE_1336_length_11990_cov_43.1462 . five_prime_UTR 11724 11727 . - . ID=g5711.t1_g5712.t1.utr5p1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 11671 11727 . - . ID=g5711.t1_g5712.t1.exon1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 11671 11723 . - 0 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 11394 11468 . - . ID=g5711.t1_g5712.t1.exon2;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 11394 11468 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 10971 11042 . - . ID=g5711.t1_g5712.t1.exon3;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 10971 11042 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 10539 10610 . - . ID=g5711.t1_g5712.t1.exon4;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 10539 10610 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 10228 10299 . - . ID=g5711.t1_g5712.t1.exon5;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 10228 10299 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 9915 9986 . - . ID=g5711.t1_g5712.t1.exon6;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 9915 9986 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 9646 9717 . - . ID=g5711.t1_g5712.t1.exon7;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 9646 9717 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 9446 9521 . - . ID=g5711.t1_g5712.t1.exon8;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 9446 9521 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 8331 9255 . - . ID=g5711.t1_g5712.t1.exon9;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 8331 9255 . - 0 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 7811 8220 . - . ID=g5711.t1_g5712.t1.exon10;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 7811 8220 . - 2 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 6923 7604 . - . ID=g5711.t1_g5712.t1.exon11;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 6923 7604 . - 0 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 6450 6658 . - . ID=g5711.t1_g5712.t1.exon12;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 6450 6658 . - 2 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 5953 6305 . - . ID=g5711.t1_g5712.t1.exon13;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 5953 6305 . - 0 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 5656 5789 . - . ID=g5711.t1_g5712.t1.exon14;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 5656 5789 . - 1 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 5401 5447 . - . ID=g5711.t1_g5712.t1.exon15;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 5401 5447 . - 2 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . exon 4535 5058 . - . ID=g5711.t1_g5712.t1.exon16;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . CDS 4741 5058 . - 0 ID=cds.g5711.t1_g5712.t1;Parent=g5711.t1_g5712.t1 NODE_1336_length_11990_cov_43.1462 . three_prime_UTR 4535 4740 . - . ID=g5711.t1_g5712.t1.utr3p1;Parent=g5711.t1_g5712.t1 #PROT g5711.t1_g5712.t1 g5711_g5712 MSTLPSGIFDKLPALTSLDLSFNRFSTIPSGIFTTKLAALTSVFLGNNQLVMLPNGVFDNLTSLITMGLHANKLTTIPSGTFDKLTSLITLTLYQNQLTSLPSGIFDKLTSLTSLTIHSNELTSLPNGIFDKLTLLTVLRLDSNQIATLPSGIFDKLANLTRLTLYSNQLATLPSGIFDRLGKLTNASTTTVGLALRPNPGDVGNLCPNSASHCVAKTCVTCFCDSGWTGADCSSVCPPGTYGSNCSIPCPCQNGVNTCNRFNGACTCTVAGWTGLLCNLACASDRFGVNCSSICDCKNGASCDRFTGACSCTAGWTGVKCDTACATNRFGVDCSNICDCQNGASCDRFTGACSCTTGWTGVKCDTACATNRFGVDCSNICDCQNGASCDRFTGACSCTAGWTGVKCDTACATDRFGANCGSVCNCQNGASCDRFTGACTCMAGWMGAMCSTECPSKQYGPNCSLMCACGDGGSCNRFNGTCTCLAGSRFYGPSCSLCACNAGRCNDGVFGDGACDCSALLGSGGANCNTTCDLLPGKPSKFGYGCLTPCACVNGVACNVTNGACTCAFGWTGVVCDVIVRPSVPTVIARPEFNKSNVAIRLEWYHDDVGPRPWNNTWHYEISRGGCFPKVLQVGDVHTYLDKDVIINQGYTYYVRAFNSMNVSSISAALAGIERLQKTDPPSPPFEISSTPTLDPDTQQPMIKLDWKEDTSSGPITKTFIFRDTRLILDGLMGTEYSDRDVVYGKTYVYQIMVANEYGNSTAASFNGTASIHSADPAGGAAGSSSQDVAGPIAGGVVGAVVGAAGIVIATIVIRKRVSRRKMEALVRSELDLIDTVVRRPEIAEIEIPGSSIHLRNRIGEGEFGEVYLGDITQKGSVVIKAAVKTFKMTSLSGADEIRSARSAFMAEIDLMRTIPHHSNIIQLIGVCTQDDPNCMILEFAAHGDLRHFFGDCKTTDLTSVDLMCFCIDVARGMEHLAKCGIVHRDLAARNCMVVAGPRPANALETGWKLSPKAQVLVKVADMGLSRETGSSGDYYMAKTRRKLPVKWMAPESLQKRIFTTSSDVWSFGIVMWEVFARGGKPYPGLENHAVLAYISQNKRMDPPSDCPKLAYAVMDSCWRKHAETRPQFSQIVLQLRRGMATLLHGAEGGKRAANEDGTSHVPGAALGFDATYALTVPEDSHYAESEGSLHTLQNPVFQADSILLAGPSLTNA* # PASA_UPDATE: g6377.t1, single gene model update, valid-1, status:[pasa:asmbl_6226,status:3], valid-1 NODE_356_length_26112_cov_40.2779 . gene 9559 11293 . - . ID=g6377;Name=g6377.t1 NODE_356_length_26112_cov_40.2779 . mRNA 9559 11293 . - . ID=g6377.t1;Parent=g6377;Name=g6377.t1 NODE_356_length_26112_cov_40.2779 . five_prime_UTR 11241 11293 . - . ID=g6377.t1.utr5p1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . exon 11092 11293 . - . ID=g6377.t1.exon1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . CDS 11092 11240 . - 0 ID=cds.g6377.t1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . exon 10647 10900 . - . ID=g6377.t1.exon2;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . CDS 10647 10900 . - 1 ID=cds.g6377.t1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . exon 10206 10367 . - . ID=g6377.t1.exon3;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . CDS 10206 10367 . - 2 ID=cds.g6377.t1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . exon 9559 9887 . - . ID=g6377.t1.exon4;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . CDS 9706 9887 . - 2 ID=cds.g6377.t1;Parent=g6377.t1 NODE_356_length_26112_cov_40.2779 . three_prime_UTR 9559 9705 . - . ID=g6377.t1.utr3p1;Parent=g6377.t1 #PROT g6377.t1 g6377 MVDLVLDPSIRNWVLVPIFVVMFLLGVFRHYISEVMKKEKAPEVQQVMDGQAMTRSSLLRLHCDYIPASSFAMRKQFFVRKEGGWFASQERSGPANPMSDPNMMMDMMKGNLSFVIPQALIMGWINYFFSGFVTTKVPFPLTIRFKPMLQRGVELSALDASWVSSLSWYFLNMFGMKGVHSLILGENNSADQSKMMQQQMTGGLAGGAPNPMADMRAAFKAEAENLELTAHTWALDGVEERLLKSKQA* # ORIGINAL: g6375.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 2564 4225 . + . ID=g6375;Name=g6375.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 2564 4225 . + . ID=g6375.t1;Parent=g6375;Name=g6375.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 2564 4225 . + . ID=g6375.t1.exon1;Parent=g6375.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 2564 4225 . + 0 ID=cds.g6375.t1;Parent=g6375.t1 #PROT g6375.t1 g6375 MLSAVRASTRVLCAAQTRGVFGLRVWNALTPAHASPLTNASVAVARVHASSVVSEDDSLATRGSQYRVNSPSTFEGSGNRSGSGNEAAKILMVRLHNAIKSDDPAQALAIFDHERRLRNPNIDDGHYNTAIRACADARKGFRAVTYYHEMRKARLEPSQFTFAMLFSAFANNFSGQLVREARSFRREMDFRRIAPATRTLCSYISVFSRAHLDEEAFSLLDTGRTLEEREHDRQLGRSFRLPEGWPDDRVFNAVSYACTTPALRNKLMAKMDASGVPVASAHIYMFLKAAFIHLVQKPGDVSAPTEDGVVSLHKLDSHNVDAATIESMRKAADDVFEIARQRGIVVDDKTHTFILNVDGLVDPLKHLESLKRERGGAGISGKLVGSAIDALSAAQRHSDAIAVYKDCVAGRDGLSVDQLIVEAAASAYGSAGDMEGAEALLSSVLNGGNLFPSDRVFQGVLAAAMTRGDWAEVKRALESFLEYQRVPAQNDASDALRWVRTHAPDHVDEAVTLLGKAHDAKQIRLGRVPNPTSKFRMMMERHQSLQQMQPSSS* # PASA_UPDATE: g6380.t1, single gene model update, valid-1, status:[pasa:asmbl_6227,status:12], valid-1 NODE_356_length_26112_cov_40.2779 . gene 15688 16962 . - . ID=g6380;Name=g6380.t1 NODE_356_length_26112_cov_40.2779 . mRNA 15688 16962 . - . ID=g6380.t1;Parent=g6380;Name=g6380.t1 NODE_356_length_26112_cov_40.2779 . five_prime_UTR 16921 16962 . - . ID=g6380.t1.utr5p1;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . five_prime_UTR 16687 16750 . - . ID=g6380.t1.utr5p2;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . five_prime_UTR 16185 16268 . - . ID=g6380.t1.utr5p3;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . exon 16921 16962 . - . ID=g6380.t1.exon1;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . exon 16687 16750 . - . ID=g6380.t1.exon2;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . exon 15688 16268 . - . ID=g6380.t1.exon3;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . CDS 15981 16184 . - 0 ID=cds.g6380.t1;Parent=g6380.t1 NODE_356_length_26112_cov_40.2779 . three_prime_UTR 15688 15980 . - . ID=g6380.t1.utr3p1;Parent=g6380.t1 #PROT g6380.t1 g6380 MAKYEYPLKNIPAVARDPWAKHEAWRAQYRGWTNYSRMFPGIGIGFGIFLVIWGYETLTAPKDGGHH* # ORIGINAL: g6381.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 17551 18858 . + . ID=g6381;Name=g6381.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 17551 18858 . + . ID=g6381.t1;Parent=g6381;Name=g6381.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 17551 17909 . + . ID=g6381.t1.exon1;Parent=g6381.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 17551 17909 . + 0 ID=cds.g6381.t1;Parent=g6381.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 18507 18858 . + . ID=g6381.t1.exon2;Parent=g6381.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 18507 18858 . + 1 ID=cds.g6381.t1;Parent=g6381.t1 #PROT g6381.t1 g6381 MQLPFSYVSALDGVHTLELLCEKIVDVSVLRNVHTLDFSWCKGIVDVSALGGVHMLFLTGCNGVVDVSALGSVHTLDLHGCVNVVDVSALGGVHTLNLSYCDQLVDVSALGHVHTLNLTCLVLFGCKNVVDVSALGGIHELDLEGCENVVDVSALRGVHTLDLTRCKNVVDISALSCVKHLRFIWDDYGKNDGEPDGESDGESDGESAGESDDGDDTETDWSSDIGSAGGREPQEP* # ORIGINAL: g6374.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 301 1676 . + . ID=g6374;Name=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 301 1676 . + . ID=g6374.t1;Parent=g6374;Name=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 301 437 . + . ID=g6374.t1.exon1;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 301 437 . + 2 ID=cds.g6374.t1;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 786 885 . + . ID=g6374.t1.exon2;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 786 885 . + 0 ID=cds.g6374.t1;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 1114 1158 . + . ID=g6374.t1.exon3;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 1114 1158 . + 2 ID=cds.g6374.t1;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 1411 1676 . + . ID=g6374.t1.exon4;Parent=g6374.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 1411 1676 . + 2 ID=cds.g6374.t1;Parent=g6374.t1 #PROT g6374.t1 g6374 FIKGLLNSVGTHVDPIRIIKRIKAGMEIPGLRDALVKILHDYNLQISLREGCKKILVSDSVALSERLYRAQRRAVYVAEATTCSLCGGYALSDGRREKVAIIVFLCRHVCHDHCLRRPRDDAGAGAGAPSKGQVAAVKQGVQSSSSPSPAQGRKGAAVTSEPRMFCPVCTSGPQSKKGKGK* # PASA_UPDATE: g6382.t1, single gene model update, valid-1, status:[pasa:asmbl_6228,status:12],[pasa:asmbl_6229,status:12], valid-1 NODE_356_length_26112_cov_40.2779 . gene 19479 24036 . - . ID=g6382;Name=g6382.t1 NODE_356_length_26112_cov_40.2779 . mRNA 19479 24036 . - . ID=g6382.t1;Parent=g6382;Name=g6382.t1 NODE_356_length_26112_cov_40.2779 . five_prime_UTR 23910 24036 . - . ID=g6382.t1.utr5p1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 23710 24036 . - . ID=g6382.t1.exon1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 23710 23909 . - 0 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 23268 23496 . - . ID=g6382.t1.exon2;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 23268 23496 . - 1 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 22858 23089 . - . ID=g6382.t1.exon3;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 22858 23089 . - 0 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 22312 22373 . - . ID=g6382.t1.exon4;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 22312 22373 . - 2 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 21044 22051 . - . ID=g6382.t1.exon5;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 21044 22051 . - 0 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 20508 20768 . - . ID=g6382.t1.exon6;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 20508 20768 . - 0 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . exon 19479 20185 . - . ID=g6382.t1.exon7;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . CDS 19871 20185 . - 0 ID=cds.g6382.t1;Parent=g6382.t1 NODE_356_length_26112_cov_40.2779 . three_prime_UTR 19479 19870 . - . ID=g6382.t1.utr3p1;Parent=g6382.t1 #PROT g6382.t1 g6382 MAALEEAEVLSKLHRIGLESAAKPAICELKRSELIEAFAFLLSRFDDSWAWSVDEHDDTYNCHTIMRLLRLLNLGHHVRQASEIEPDNKKMARTLLLILEKVEAKHGAALYRKKIIYKSRQSMAPSKAAPGTPKSKSLPRQQQVTPPPPVAAQQPSKVKRTPLKEATSVSSNAQPQQARSARVKKPVDISSLAPEEAAAAGDQVVFRTGKSLARTPPKPIAAVGTKGQENGHADAQTDNTQTNAGDDDNAVVQLVAPPTATPLSHVSAPSAAPLATDHPLTPTEGQQIPDDPSRTIIKSRKSTVAASASVPHIEAVAEANEQCASPFLAPPAKIEVPAVASASVASSSVAPISATLAPVAVAVSVAPAAVSAISVAPAKASVTTAALAPQLATTQHTACPPASVDVAECKVTTTAEVAQTAASIPAASVSVTAPLSVSVAEYDAIPEVVMEEGIGANPFAAKKRLARTPPSAKKAALDAAHTDAQIHPQPRPATNSHIPRPKSAAPVSSNLSGALLHAATTGTVSALDDRPINPAPAPTPVDSRRVVHALIANSYTDHGLSLKTNISSSAPAPVVLKAPTLALKASIIDGRQPLRASAASTSADTTASSVLSTTTTTTTTTSSAASAPVSFSLPTGTTPARKLHPAMEAVDMPTSTSKVAKESESVRRGLANMINGAMLDMSARRMNIADVPSTPLTSSKTATSSFPYSAAGVVSISVPTKEPAAMCAPGCIEGDDAATARNNDMVRQMLKRAELYIERHKVLQHSKE* # ORIGINAL: g6378.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 11898 13250 . - . ID=g6378;Name=g6378.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 11898 13250 . - . ID=g6378.t1;Parent=g6378;Name=g6378.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 11898 13250 . - . ID=g6378.t1.exon1;Parent=g6378.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 11898 13250 . - 0 ID=cds.g6378.t1;Parent=g6378.t1 #PROT g6378.t1 g6378 MGTISPPSSAEGAHCGGQQPATLLSIPVEVFREHIARHLFPKDIVSLSHTNTTLRSCVAGLRLFTLRDELVGEFCNSNAFRDVIFRYIPRSRLAIPRFSPISSSDALDISMFSGIHTVNISFSLVVDVSALQNVHTLDLSHCGRLCDVSSLGRVHALDISYCREVTDVSGLGSVHTLALRGCIKVVDVSPLHGVHSLDLGHALIDDVSALGTVHTLDLCGCVNVTNVSALGCVHTLSISDYDGERDLSALANIYSLDASACSQLRDVSALGRIHTLNLMRCDNLVDVSPLGMVHSLVLAYCEGVTDVSLLGRCHWLCLSGCTNIVNVAALGHVHTLDLSVCVYLKDVSALGGVHTLDLSHCESLTDVSMLRKVHSLNLSYCTNVGDVSALGSVHTLNLECCANVFDISALTGVHTLNLKGTRHHSEADVVEVDAALLKSQRFPVHSPSAS* # ORIGINAL: g6379.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 13728 15227 . + . ID=g6379;Name=g6379.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 13728 15227 . + . ID=g6379.t1;Parent=g6379;Name=g6379.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 13728 15227 . + . ID=g6379.t1.exon1;Parent=g6379.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 13728 15227 . + 0 ID=cds.g6379.t1;Parent=g6379.t1 #PROT g6379.t1 g6379 MADDVLPPSTGRHVRFGSINTVSYEPNEYENEALVIRSSESVAKQRTARAQSEELATGRLVLLDAVRGLLMILMALDHASALVAHVHPNEAWDGVTPYASTALGRLEFATRYATVACAPGFALLMGMGMVYYTKSRHKLMWAEGRILRHHLLRAVFMIIPCMTPFEILSFSLATYIWPSLREFHNCYVYVGVLWALSTSTCIGAVAMRFLASAPRWARIAVHFALGAGALLLTGVIIAEIDEGDSFNILVRLLVVPGQSGYFYVAFPTIPWAGFVLFGCALAEAVGRSELRFVQVIAASLVGLIPAFVVVRIVGSFGNMVRIPHSDSPFSSHNKAIDFLNVVKYPPSIVFALLSLSTFACIVLVLWLLSHVPPLPSCHSRTRSNTQHEDSDSDTAPLLEDGERTVNRSGSDRDALRACQGPYSGILWRPLLVFGRAPLFFYVCHAVFFCIFSLPGDPHGLPFWAVFPFWACGICVLYWPTKKYGDFKRRTHADSLWRLF* # ORIGINAL: g6376.t1 original gene structure, not modified by PASA NODE_356_length_26112_cov_40.2779 AUGUSTUS gene 5107 8334 . - . ID=g6376;Name=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS mRNA 5107 8334 . - . ID=g6376.t1;Parent=g6376;Name=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 8164 8334 . - . ID=g6376.t1.exon1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 8164 8334 . - 0 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 7859 7945 . - . ID=g6376.t1.exon2;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 7859 7945 . - 0 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 7278 7393 . - . ID=g6376.t1.exon3;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 7278 7393 . - 0 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 6697 6790 . - . ID=g6376.t1.exon4;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 6697 6790 . - 1 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 6489 6556 . - . ID=g6376.t1.exon5;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 6489 6556 . - 0 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 6035 6144 . - . ID=g6376.t1.exon6;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 6035 6144 . - 1 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 5730 5852 . - . ID=g6376.t1.exon7;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 5730 5852 . - 2 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 5389 5540 . - . ID=g6376.t1.exon8;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 5389 5540 . - 2 ID=cds.g6376.t1;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS exon 5107 5241 . - . ID=g6376.t1.exon9;Parent=g6376.t1 NODE_356_length_26112_cov_40.2779 AUGUSTUS CDS 5107 5241 . - 0 ID=cds.g6376.t1;Parent=g6376.t1 #PROT g6376.t1 g6376 MSSTGTVGRTARRTHVSEDAVLSQLANDAESRLAAKRKARKEARVAIETRQESIQRKEEEKLTDKFNEITEIDKLVRQERIQSALEPIEKLALLKDQLDKALESKDMVESSKAALRFAIEHLKDTLEDRDEQLAELRSLLKQSKMHATQSQQRLAITSQELEEVKIEKQQLATKLEELGNAALNAQPSSESIAASALAEESLKEAKELRQSLTKTEEELSELRKDHSVLSESSARLRIENVRLQERIKIAETTEAPRTLVRRPSVDADSRELERKYEEEALARGRAERQLTKANQRVELLEKDIAEGEETCRNLRSEARKSQREIKQQAQQIADLKAEIDMLKSKVLSAKR* # PASA_UPDATE: g7665.t1, single gene model update, valid-1, status:[pasa:asmbl_507,status:3], valid-1 NODE_1133_length_13681_cov_41.9796 . gene 3334 6933 . - . ID=g7665;Name=g7665.t1 NODE_1133_length_13681_cov_41.9796 . mRNA 3334 6933 . - . ID=g7665.t1;Parent=g7665;Name=g7665.t1 NODE_1133_length_13681_cov_41.9796 . five_prime_UTR 6588 6933 . - . ID=g7665.t1.utr5p1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 6526 6933 . - . ID=g7665.t1.exon1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 6526 6587 . - 0 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 6247 6388 . - . ID=g7665.t1.exon2;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 6247 6388 . - 1 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 5892 6075 . - . ID=g7665.t1.exon3;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 5892 6075 . - 0 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 5412 5590 . - . ID=g7665.t1.exon4;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 5412 5590 . - 2 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 5111 5194 . - . ID=g7665.t1.exon5;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 5111 5194 . - 0 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 4736 4931 . - . ID=g7665.t1.exon6;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 4736 4931 . - 0 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 4447 4512 . - . ID=g7665.t1.exon7;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 4447 4512 . - 2 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 3875 3972 . - . ID=g7665.t1.exon8;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 3875 3972 . - 2 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . exon 3334 3671 . - . ID=g7665.t1.exon9;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . CDS 3630 3671 . - 0 ID=cds.g7665.t1;Parent=g7665.t1 NODE_1133_length_13681_cov_41.9796 . three_prime_UTR 3334 3629 . - . ID=g7665.t1.utr3p1;Parent=g7665.t1 #PROT g7665.t1 g7665 MSLHMGHPSSSVGMQQDDKMTRTVKGAPARRCFTPEALAAFEAMFKTVPQPTELQLKELAGAFNEEFTRVKVWFNNRRAKDRKHQDPFLRGSAFAPDLDSFNHLLATAGGSSDAYYIGSTFHKLQAHSGAIVDLDSLPDVVTPEMAQVMRDRIFELEAIAAAVKRSTKRGRPTDGTRTKRRKTIKNPRTILRKIMNRLRATLKTQKFAQPGWEGMKEVKVDDQLFPEEFEMIFAQKGSSLAQGDSSKPKNNIVIREYDLNAMKDVFGDEFTGEGLKATLYAKAKGSSTVKAHKIKNAPTQVNGMSVTYNSKTHRLTMRFQAYITIDPTQALMPQSLGQMQGWEPSHNLGQ* # ORIGINAL: g7664.t1 original gene structure, not modified by PASA NODE_1133_length_13681_cov_41.9796 AUGUSTUS gene 129 2629 . - . ID=g7664;Name=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS mRNA 129 2629 . - . ID=g7664.t1;Parent=g7664;Name=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS exon 2498 2629 . - . ID=g7664.t1.exon1;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS CDS 2498 2629 . - 0 ID=cds.g7664.t1;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS exon 1385 1971 . - . ID=g7664.t1.exon2;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS CDS 1385 1971 . - 0 ID=cds.g7664.t1;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS exon 919 1100 . - . ID=g7664.t1.exon3;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS CDS 919 1100 . - 1 ID=cds.g7664.t1;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS exon 129 340 . - . ID=g7664.t1.exon4;Parent=g7664.t1 NODE_1133_length_13681_cov_41.9796 AUGUSTUS CDS 129 340 . - 2 ID=cds.g7664.t1;Parent=g7664.t1 #PROT g7664.t1 g7664 MSRSLVVSASYKIIFVDCFIFYQVASLEQLLLQLLVPDNNVIRQARHIAAVLVRRRIVKQWIRLPDQAKEAARTLLLEALAAEPHPFIGHAIARVIAAIGRHDIPNGQWPTLLSFLSDCADKGERRHREAGVYVLASLCESSAGTLSMYFPALFELFARVFAADRSATGEASFHAIDALTSIVPAMESAHVAQFRSLLPAIVGVIQGALASGDEQHAAKAMEVFDEIVESELPILKGNLGDLVQIFLQIASNTSYENTTRVRAMTFIVFVAASKPKALVKQNLLEGILLALVGILAGGNDEGEDHNDDGDDDDDELGIDAQSPSSFASQVIDVLAQNVPAERLVVPLLQALRPLSQSPNPRDRKASLIGLR # PASA_UPDATE: g7666.t1, single gene model update, valid-1, status:[pasa:asmbl_505,status:12],[pasa:asmbl_508,status:12], valid-1 NODE_1133_length_13681_cov_41.9796 . gene 7652 13250 . - . ID=g7666;Name=g7666.t1 NODE_1133_length_13681_cov_41.9796 . mRNA 7652 13250 . - . ID=g7666.t1;Parent=g7666;Name=g7666.t1 NODE_1133_length_13681_cov_41.9796 . five_prime_UTR 13130 13250 . - . ID=g7666.t1.utr5p1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 12173 13250 . - . ID=g7666.t1.exon1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 12173 13129 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 11590 11940 . - . ID=g7666.t1.exon2;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 11590 11940 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 11236 11352 . - . ID=g7666.t1.exon3;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 11236 11352 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 10884 11067 . - . ID=g7666.t1.exon4;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 10884 11067 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 10550 10707 . - . ID=g7666.t1.exon5;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 10550 10707 . - 2 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 9786 10330 . - . ID=g7666.t1.exon6;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 9786 10330 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 9301 9595 . - . ID=g7666.t1.exon7;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 9301 9595 . - 1 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 8851 9021 . - . ID=g7666.t1.exon8;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 8851 9021 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 8564 8668 . - . ID=g7666.t1.exon9;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 8564 8668 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . exon 7652 8195 . - . ID=g7666.t1.exon10;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . CDS 8022 8195 . - 0 ID=cds.g7666.t1;Parent=g7666.t1 NODE_1133_length_13681_cov_41.9796 . three_prime_UTR 7652 8021 . - . ID=g7666.t1.utr3p1;Parent=g7666.t1 #PROT g7666.t1 g7666 MGSGASKHNRTSPQPISILEAIVGMSSANSVTELNKLTVQGVERTLGKAKSTVHIVYADPLTSRVHRVNTAGKVETDHFPFGTGILGTVAKSGLSAVVRNVTVDSRYKEKHDRPTGYAAGSALATAIFPVLHNKAHFAVTHIQASDGANMVVEKDQKLQKVISMLQFCRKTADGEFTKDETDQMAYLAAQYGNCLQFLKERAEFNDEMERKDRLLEMSQAVYEELDTSTLIVKILGHAKKLIGAQMCSLFLIDKEKRELYAHIFDDQIATDSHILGSHANLNNRRGSLTPGILTPKISDAHLAKKTSLGQGPKAQSTPKINADGKIVPPAQLPPLDAKGRGPSDGHAPAALNSVSGHSTVGALPTKKAPNIRFPIGVGIAGHVAGTGETLNIPDAYEEPRFNQDVDKKTGFKTKTILCSPIYSHHEIIAVAQLINKTNGAFTAKDEMTFKSFLVFAGNAIRNAQLYEQAVFSTEQRRVLLKLAESIFEEFDLTRMMKKIMAHAVELVPCDRCSVFLVDHDKGELYSRIFDFHDDAGGAAPSADDKPKAPPEIRFPMNKGIAGHVATTRESLNIPDAYADARFNRTVDDQTGFKTRNILCMPILKGNTCVGVAQLVNKFDDQSFDDSDNQVLQAFAIYCGIAINNAQLYEQSLKAQARTKIALELISYHTKVDDAIVKHLVSARVPSAKELGIDSFSFSPRGLTEEERCLVVLRMFLDLNFIEKYRINYTTLCRFILTIGNNYRNVPYHNWVHAISVTHSLYTLIVTCQLDRYFPNIELFALLLACLCHDVDHRGKNNAFQKLDKNALASLYEGTSVMEMHHFDHSIMILHSDGLDVLSGLHEFEQKLVLDHIKRSIIATDLSNHFANIKAFSLFADDPKAFDPTNSVHRYCLNGMLMTSCDISDIARPWPIQNETALNVYKEFFEQGDAEIALGQTPIPMMDREKADIPKCQLGFIDFVCQPVYQKLSQLLPEATYLLDGVKVNRENWQAAYDLKLKNDEIAGIPPPKSDGRVFLPTL* # PASA_UPDATE: g7495.t1, single gene model update, valid-1, status:[pasa:asmbl_6775,status:12], valid-1 NODE_3960_length_2456_cov_33.3536 . gene 168 2305 . + . ID=g7495;Name=g7495.t1 NODE_3960_length_2456_cov_33.3536 . mRNA 168 2305 . + . ID=g7495.t1;Parent=g7495;Name=g7495.t1 NODE_3960_length_2456_cov_33.3536 . five_prime_UTR 168 169 . + . ID=g7495.t1.utr5p1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . exon 168 290 . + . ID=g7495.t1.exon1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 170 290 . + 0 ID=cds.g7495.t1;Parent=g7495.t1;5_prime_partial=true NODE_3960_length_2456_cov_33.3536 . exon 598 720 . + . ID=g7495.t1.exon2;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 598 720 . + 2 ID=cds.g7495.t1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . exon 1008 1133 . + . ID=g7495.t1.exon3;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 1008 1133 . + 2 ID=cds.g7495.t1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . exon 1490 1615 . + . ID=g7495.t1.exon4;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 1490 1615 . + 2 ID=cds.g7495.t1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . exon 1885 2007 . + . ID=g7495.t1.exon5;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 1885 2007 . + 2 ID=cds.g7495.t1;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . exon 2160 2305 . + . ID=g7495.t1.exon6;Parent=g7495.t1 NODE_3960_length_2456_cov_33.3536 . CDS 2160 2305 . + 2 ID=cds.g7495.t1;Parent=g7495.t1 #PROT g7495.t1 g7495 ESRLIVSDENGLPPLLRLIASEHANVAAAGAFAIAMLSESRSISAAVGQVDGLSPLMALLSRDDTDVLDKASLALANCSVNMENRKMIQQLGGIEILVGLLSKESSPTTQANAAVILSNLSKDATYRADIRKAGGIAALVAAMEGTKDADVQSKTALAIAESMYDAEGRAELREKGGVRLLVALLKSESTDVRRNSAWAIASCAGDELTALEITSEGGLEILQDLAESTTKQNSKFASLALDKLLHHSECAGLA* # ORIGINAL: g12894.t1 original gene structure, not modified by PASA NODE_2134_length_7561_cov_40.048 AUGUSTUS gene 2414 2836 . + . ID=g12894;Name=g12894.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS mRNA 2414 2836 . + . ID=g12894.t1;Parent=g12894;Name=g12894.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS exon 2414 2559 . + . ID=g12894.t1.exon1;Parent=g12894.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS CDS 2414 2559 . + 0 ID=cds.g12894.t1;Parent=g12894.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS exon 2734 2836 . + . ID=g12894.t1.exon2;Parent=g12894.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS CDS 2734 2836 . + 1 ID=cds.g12894.t1;Parent=g12894.t1 #PROT g12894.t1 g12894 METNEDNLSNGRMGVAMGAVGGLTSEGIQDGSEQCAQSRADATRNNASSNNGDSEETTLLHDDPPLVDNRTLHVVDALSPIS* # ORIGINAL: g12892.t1 original gene structure, not modified by PASA NODE_2134_length_7561_cov_40.048 AUGUSTUS gene 83 340 . + . ID=g12892;Name=g12892.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS mRNA 83 340 . + . ID=g12892.t1;Parent=g12892;Name=g12892.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS exon 83 340 . + . ID=g12892.t1.exon1;Parent=g12892.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS CDS 83 340 . + 0 ID=cds.g12892.t1;Parent=g12892.t1 #PROT g12892.t1 g12892 MVESCEAFASDAEEAARYVASTFGNTPEDARQWFSQLRYSKGELSEAMLAECVRVLVDAKVLDGPVDVKTLYDGDVAKIVDHHTG* # ORIGINAL: g12893.t1 original gene structure, not modified by PASA NODE_2134_length_7561_cov_40.048 AUGUSTUS gene 1349 1972 . + . ID=g12893;Name=g12893.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS mRNA 1349 1972 . + . ID=g12893.t1;Parent=g12893;Name=g12893.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS exon 1349 1518 . + . ID=g12893.t1.exon1;Parent=g12893.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS CDS 1349 1518 . + 0 ID=cds.g12893.t1;Parent=g12893.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS exon 1831 1972 . + . ID=g12893.t1.exon2;Parent=g12893.t1 NODE_2134_length_7561_cov_40.048 AUGUSTUS CDS 1831 1972 . + 1 ID=cds.g12893.t1;Parent=g12893.t1 #PROT g12893.t1 g12893 MDFDEKNTADAGTPMRSAAHDEVRSMNPLLGTESLDINARREVSKIQSGGARKKSARVSGTYGWGDNQNRTQQALEAAGVEMPDRDFVPVTRREQLSKAQQQQ* # PASA_UPDATE: g12895.t1, single gene model update, valid-1, status:[pasa:asmbl_3597,status:3], valid-1 NODE_2134_length_7561_cov_40.048 . gene 4209 7037 . - . ID=g12895;Name=g12895.t1 NODE_2134_length_7561_cov_40.048 . mRNA 4209 7037 . - . ID=g12895.t1;Parent=g12895;Name=g12895.t1 NODE_2134_length_7561_cov_40.048 . five_prime_UTR 6888 7037 . - . ID=g12895.t1.utr5p1;Parent=g12895.t1 NODE_2134_length_7561_cov_40.048 . exon 4977 7037 . - . ID=g12895.t1.exon1;Parent=g12895.t1 NODE_2134_length_7561_cov_40.048 . CDS 4977 6887 . - 0 ID=cds.g12895.t1;Parent=g12895.t1 NODE_2134_length_7561_cov_40.048 . exon 4209 4588 . - . ID=g12895.t1.exon2;Parent=g12895.t1 NODE_2134_length_7561_cov_40.048 . CDS 4217 4588 . - 0 ID=cds.g12895.t1;Parent=g12895.t1 NODE_2134_length_7561_cov_40.048 . three_prime_UTR 4209 4216 . - . ID=g12895.t1.utr3p1;Parent=g12895.t1 #PROT g12895.t1 g12895 MAADARTIVNSTLSRPVLLGLIILFTAAVATFAYKGATDGTSGVFVYISPGESGTAPGAAALSDTMAGGSHVYQSFERLVTVLPADTDRPDAPASHAVTLEFSDQDAAEITSTLKSPTLPSPPALDTDAIERCADVVASVATLAAYPCRPMDIDTSLLTIFVVPERRETQYGIVVTAVVQVKNATAAAAAAAAAAKSGKSRSDDGHGTAVPNQSPVPLVMGALMAGNLVCRTCASIKDALLVNAFAFSYDHCDGHYSFSFEGLPREGHSYDFFVSPFFVNYAHYISTGYGCNRTLSGYVETIPDAMAHLSCGLHNIPLGLGIRIGAANSTDSGNTDGKRGRKFDGSAASTSAASGLPGWPTQSPLSAARRKVDQLQLTEAARLPIATLTQASRVTASAQPANLATQPEVCSRGVDDGRWIVRGDIANAVATGSNPADGDDKWPHLCREVGTNPDARMPWDVDNYVWCPYNCVLRHYSASEVDACFHKKNWTSVFFMGDSRMRNQFLDLGARLTVAPLPVLLYNNPFNRTSTISSMFRLSQTSFFLKGVWGYYPDIEPAPGQCDYDMRSHNNGSARYLAMRRAVRAIGPTVMQNLFPTSKQHRPTSSSSASPRSADPPSPNVGAADIVIITEGIHSIQTFRTDEDFSDSVRDWLTVLLSVTPQPQIVYITMPAMAGLSYNPTVSNVRIKRLNQVAVDIVRRIAPDALILDAFAMTITRAPDRYYDGLHFFPRDEPKTLPGSSYSRIIGSELNLALINLLCN* # ORIGINAL: g779.t1 original gene structure, not modified by PASA NODE_3489_length_3346_cov_46.0245 AUGUSTUS gene 534 1739 . - . ID=g779;Name=g779.t1 NODE_3489_length_3346_cov_46.0245 AUGUSTUS mRNA 534 1739 . - . ID=g779.t1;Parent=g779;Name=g779.t1 NODE_3489_length_3346_cov_46.0245 AUGUSTUS exon 1023 1739 . - . ID=g779.t1.exon1;Parent=g779.t1 NODE_3489_length_3346_cov_46.0245 AUGUSTUS CDS 1023 1739 . - 0 ID=cds.g779.t1;Parent=g779.t1 NODE_3489_length_3346_cov_46.0245 AUGUSTUS exon 534 608 . - . ID=g779.t1.exon2;Parent=g779.t1 NODE_3489_length_3346_cov_46.0245 AUGUSTUS CDS 534 608 . - 0 ID=cds.g779.t1;Parent=g779.t1 #PROT g779.t1 g779 MQRSILPHPMAASRAPGHGPGGVPKKTRKLCNCKNSRCLKLYCECFASGEYCDGCNCTNCFNNEQNEQARKEAIEQTLERNPNAFKPKIGAGVEDNVHGPHESVVRHTKGCHCRRSNCLKKYCECFQAGVPCSDNCKCSDCKNFEDNADRRSLLLLANLAQSTGTGVGVGAGAGVGMGGAGMSAGAVNALGAAGGLVPAGGPGANTKQPRHRSPSPTVQSRAKRQKTSDQEASANDAPMPGMDVTAAIRSQLNGVRKTNGAQV* # PASA_UPDATE: g14123.t1, single gene model update, valid-1, status:[pasa:asmbl_1600,status:12],[pasa:asmbl_1602,status:12], valid-1 NODE_1441_length_11266_cov_41.9521 . gene 885 5383 . + . ID=g14123;Name=g14123.t1 NODE_1441_length_11266_cov_41.9521 . mRNA 885 5383 . + . ID=g14123.t1;Parent=g14123;Name=g14123.t1 NODE_1441_length_11266_cov_41.9521 . five_prime_UTR 885 1301 . + . ID=g14123.t1.utr5p1;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . five_prime_UTR 1407 1475 . + . ID=g14123.t1.utr5p2;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . exon 885 1301 . + . ID=g14123.t1.exon1;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . exon 1407 1484 . + . ID=g14123.t1.exon2;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . CDS 1476 1484 . + 0 ID=cds.g14123.t1;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . exon 1598 3464 . + . ID=g14123.t1.exon3;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . CDS 1598 3464 . + 0 ID=cds.g14123.t1;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . exon 3782 4195 . + . ID=g14123.t1.exon4;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . CDS 3782 4195 . + 2 ID=cds.g14123.t1;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . exon 4446 5383 . + . ID=g14123.t1.exon5;Parent=g14123.t1 NODE_1441_length_11266_cov_41.9521 . CDS 4446 5383 . + 2 ID=cds.g14123.t1;Parent=g14123.t1 #PROT g14123.t1 g14123 MEKLLSIGHSRDHGRVLDIVADRRRGCRYFANEHFAPTYVGQTSLTLSADDREKNATLAAAAWYDDHLRDTNVHVTVLSDIISADDGAALGLEVLSMGAFIERHFGDRRDLTELHESIRVSVDAKTRVFAAENTNNSSVEEGGATVASAVMGRVAVGGRVPSSYPAHAAEDALLAGVQSAVYAMGVLHVPRGRSLDIAFVRQRGVGNNAVETVPDIRDADALLDAAPANVPREILLCGMASRNRAIHGDLVVVEVFPRAQWQSPSASVVVTNAEEDVGGVLDADSGLRGRTSAGVIPTGKVVGVLRRNWRDYVCTLSEEDERLVSSGSSSGNIARVLCIPMDSRVPRIRVATRNADRLSGVRFIVRIDRWDASQSHPDGHAVRSLGCLGAVDTEIAAILVENGLQPNPTYSAKQLAELPSPNWCAGPCCDDGDATTRRRDFRGSEHLVFSIDPLGSKDVDDALSVRRLADGRVELAVHIADVSHFVRASSSNDFEARDRSTTLYLADRRYDMLPPLLSEDLCSLLGGQDRYAFSVVWTMRETEVDAPASASGGIGGGRVKAYNVEDVWYGRTVVRSAYQMHYELAQEIHDRSKTDAEFLTLLRQLKGGMESARSLSAVSAVRAAVGALELYSTEVRFKLAAADTSKSAEPTVVELIAKKELEIHSTVAECMVLANHWVARRIADAFPDRALLRYHPPPRPEDFAELVELAKERGFVLDTRSNRALARSLDAVASSSDDVEVGRFFRSMATAAMSEAAYFSTGDVESADAFFHYGLALGHYTHFTSPIRRYADILVHRQLAAAIGVSSVDDIPSRRDLPRIARHINMRHRASKLAQEDSTLLYQCIYFRQAAAADTRGVITDAIVRRTRSDGFVAFAPGLCVEAPVVLRTKGGPLDIPGGMFSQGGQTLLGKKCESTDADGCVRGSVSRDGDDVVALAVSVPGLPDVNPPRELRFRLFDRVRVSVVLVTSRAHRDKIRFRLVGWADGSGGSASAGHARREGSSGVAQNSAVALALDAMSEGALRATESASKKGTHSGCARALANPYAQSADDATLYHLVERMKLMAVEDDNTHVDL* # ORIGINAL: g14125.t1 original gene structure, not modified by PASA NODE_1441_length_11266_cov_41.9521 AUGUSTUS gene 10819 11266 . - . ID=g14125;Name=g14125.t1 NODE_1441_length_11266_cov_41.9521 AUGUSTUS mRNA 10819 11266 . - . ID=g14125.t1;Parent=g14125;Name=g14125.t1 NODE_1441_length_11266_cov_41.9521 AUGUSTUS exon 11053 11266 . - . ID=g14125.t1.exon1;Parent=g14125.t1 NODE_1441_length_11266_cov_41.9521 AUGUSTUS CDS 11053 11266 . - 1 ID=cds.g14125.t1;Parent=g14125.t1 NODE_1441_length_11266_cov_41.9521 AUGUSTUS exon 10819 10893 . - . ID=g14125.t1.exon2;Parent=g14125.t1 NODE_1441_length_11266_cov_41.9521 AUGUSTUS CDS 10819 10893 . - 0 ID=cds.g14125.t1;Parent=g14125.t1 #PROT g14125.t1 g14125 PLLSLFRPQGLDCLLRRFRATQRAGWDSDRDGFKRVARVALVLAEGYLDEGSERSLNSARLFLQSLVKSTEKKFFDMEEHTKLQEMFETVKKLCA* # PASA_UPDATE: g14124.t1, single gene model update, valid-1, status:[pasa:asmbl_1601,status:12], valid-1 NODE_1441_length_11266_cov_41.9521 . gene 6342 10182 . + . ID=g14124;Name=g14124.t1 NODE_1441_length_11266_cov_41.9521 . mRNA 6342 10182 . + . ID=g14124.t1;Parent=g14124;Name=g14124.t1 NODE_1441_length_11266_cov_41.9521 . exon 6342 7823 . + . ID=g14124.t1.exon1;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . CDS 6342 7823 . + 0 ID=cds.g14124.t1;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . exon 8221 9773 . + . ID=g14124.t1.exon2;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . CDS 8221 9773 . + 0 ID=cds.g14124.t1;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . exon 9978 10182 . + . ID=g14124.t1.exon3;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . CDS 9978 10161 . + 1 ID=cds.g14124.t1;Parent=g14124.t1 NODE_1441_length_11266_cov_41.9521 . three_prime_UTR 10162 10182 . + . ID=g14124.t1.utr3p1;Parent=g14124.t1 #PROT g14124.t1 g14124 MRKEIDSSFILLYQVGEFYELMGDDAERVAQRVALRTSDRGSTKLAGFPVANANVWIDRMLQAGFNIAVAEQTTTLKRMQRDDVRTQKMSRAIVRYITPGTRLDEGFESRDANYLLAVTFEPLTPALPRDNRVFVTGLAWADVSTGEFVMSVGTTETLEEDLDRVKPAEILVDAKHVGLVRRALLDNKAAIATMMPLSTATKRANVNSQRPGIDSPSPSPHVQPSLEEDAADAIREYVQKIMLRSAISLPEPVRFSRDTHMSIDSDARRALELVEPFAKNVQGLTGGDGVSLLSNINRTRTAPGGRMLKRRLCSPSMDRVEIVARLDAVEHFIGDNWLRATTVKTLQEKLTRDPCQTLRKALSLRVSTNVDNSEEQYWMTVHRLISGLVTDIRSARTLVDAIGDALTGELNTSTAVVRKALPPLEALCNRFGSEVGLSRKYGVLESVPEQLAPAFVLEVEDVVKTEVADLTQRHVDFPFDRCTIVGNRDAIYFKVPREIIVPKGAYPSPPVTVDRVLYKFSGAVDGARAQNTRFELHASAIPQQSTAAYTDIATSIVSGKKEERSEQSGEEREETVDAADDKKSKKGEKKRSRKKKNPTDADQIAASTEDEVGASTSTTTTGNELLLSSPDPNAAFASTDGGASTTAFALYHHHPAPTYKLFLDKIVRRKNQAARDECVRFLKLFENEEPNLRAVSNWIGGVDIASSLANIAVDRGFCRPTLTDGVDFHIVDGRHPVVEFTLLQKQWPFTPNDCSLDISGLWLVTGPNMGGKSTFLRQNAVMTIMAQMGSFVPASKAVIGIVDKVFARVGASDNLAREQSTFMVEMLETSRILNHATERSFVIMDEIGRGTAIVDGLCIATAVLEHLRDVIRCRGLAATHFSELADVALQDAADGSANRIACVMLESIQSAQALGSAETTESTRLEGSIDSNAEMPEAATTNARPVVLNAVADRDAGVTFTHKVVRGVCYKSRGIEVAGMAGFPSSVLDRARAIMRDHEHRLQSVAGHAPQTRLDDRHRQTTKVELQSEQSSIVESDFLRRLIVAANPDELSPREAHAALYAIRAAAGVASK* # PASA_UPDATE: g6781.t1, single gene model update, valid-1, status:[pasa:asmbl_131,status:12], valid-1 NODE_1035_length_14529_cov_39.353 . gene 11943 14455 . + . ID=g6781;Name=g6781.t1 NODE_1035_length_14529_cov_39.353 . mRNA 11943 14455 . + . ID=g6781.t1;Parent=g6781;Name=g6781.t1 NODE_1035_length_14529_cov_39.353 . five_prime_UTR 11943 12092 . + . ID=g6781.t1.utr5p1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 11943 12541 . + . ID=g6781.t1.exon1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 12093 12541 . + 0 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 12641 12782 . + . ID=g6781.t1.exon2;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 12641 12782 . + 1 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 12891 13021 . + . ID=g6781.t1.exon3;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 12891 13021 . + 0 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 13198 13340 . + . ID=g6781.t1.exon4;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 13198 13340 . + 1 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 13474 13649 . + . ID=g6781.t1.exon5;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 13474 13649 . + 2 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 13922 14218 . + . ID=g6781.t1.exon6;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 13922 14218 . + 0 ID=cds.g6781.t1;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . exon 14406 14455 . + . ID=g6781.t1.exon7;Parent=g6781.t1 NODE_1035_length_14529_cov_39.353 . CDS 14406 14455 . + 0 ID=cds.g6781.t1;Parent=g6781.t1;3_prime_partial=true #PROT g6781.t1 g6781 MSRSFDEGDGPVEQVDVDFDDNRRGSDDEADGGAGGDEGGAHAAAFASYQEPADDVRIPSSSSRSGANGLVHGGGSGGAARARPPPSPLQVTTTLDERATEHTRRFFSEPTTHETSMHKQSTWTGFEESRGREMEPISHTRAAKSKPKESDGVSYPERTVSGRRRGIAVQTDPIVLPSEQMGTSQRHSNQLSLSSRMGSSHALGTSMKARKPIPSNKVAPMPASMPTSYELDEETIPDGKKKRSVRHNVRARMNRLQLYLHDLKMAYVRFRTRRDPIPLWREVMKKVEGHFGTGVAAFFVFSRWVFLLNVLLAVMWTSFVVIPQGIDFDYSLTKNETFKPQNMFDGKGSMGVMWAFYGGYSAELSSGYRMDMAYILVIVVMFFASFFLILGSISAAWDPKSREGGALVRQDLKYPFATIVLASWDHSLNSQAGIENLRLGIANTLQDRLSEVKVDQMAKVRT # PASA_UPDATE: g6779.t1, single gene model update, valid-1, status:[pasa:asmbl_129,status:12], valid-1 NODE_1035_length_14529_cov_39.353 . gene 6997 9552 . + . ID=g6779;Name=g6779.t1 NODE_1035_length_14529_cov_39.353 . mRNA 6997 9552 . + . ID=g6779.t1;Parent=g6779;Name=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 6997 7034 . + . ID=g6779.t1.exon1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 6997 7034 . + 0 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 7246 7366 . + . ID=g6779.t1.exon2;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 7246 7366 . + 1 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 7564 7704 . + . ID=g6779.t1.exon3;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 7564 7704 . + 0 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 8119 8301 . + . ID=g6779.t1.exon4;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 8119 8301 . + 0 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 8555 8720 . + . ID=g6779.t1.exon5;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 8555 8720 . + 0 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . exon 8877 9552 . + . ID=g6779.t1.exon6;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . CDS 8877 9352 . + 2 ID=cds.g6779.t1;Parent=g6779.t1 NODE_1035_length_14529_cov_39.353 . three_prime_UTR 9353 9552 . + . ID=g6779.t1.utr3p1;Parent=g6779.t1 #PROT g6779.t1 g6779 MGRNGIRCKRARVYLHPLHAQYTSRLAATFPPELSVVFLVNSGSEANDLAFRLASKFTGGRDLIVLSSAYHGHTRAVIEASPYKADKKSGGFQLPPHVHKVDAPDGYRGPHRRESFSTQADGDALGRAYAEQVKSVVENVQRNGGKVSAFICESILGCAGQVVLPDGYLRHAYEAVHSAGGLCIADEVQVGFGRVGSAMWAFELQGVVPDIVTLGKPIGNGFPMAAVITRPHIAAAFSDLEYFNTFGGNPVSCAVGLAVLDAIEADGLRANASDVGGHMRSLLDGLAKKHTCVGDVRGLGLFIGVELVLDAAARTPATELAGKVCERMKEMGILLGRDGPHDNVIKIKPPICFTRQNAETLVGALHTALEQLAV* # PASA_UPDATE: g6780.t1, single gene model update, valid-1, status:[pasa:asmbl_127,status:3], valid-1 NODE_1035_length_14529_cov_39.353 . gene 9738 11461 . - . ID=g6780;Name=g6780.t1 NODE_1035_length_14529_cov_39.353 . mRNA 9738 11461 . - . ID=g6780.t1;Parent=g6780;Name=g6780.t1 NODE_1035_length_14529_cov_39.353 . five_prime_UTR 11416 11461 . - . ID=g6780.t1.utr5p1;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . exon 11404 11461 . - . ID=g6780.t1.exon1;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . CDS 11404 11415 . - 0 ID=cds.g6780.t1;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . exon 10539 10973 . - . ID=g6780.t1.exon2;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . CDS 10539 10973 . - 0 ID=cds.g6780.t1;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . exon 9738 10033 . - . ID=g6780.t1.exon3;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . CDS 9878 10033 . - 0 ID=cds.g6780.t1;Parent=g6780.t1 NODE_1035_length_14529_cov_39.353 . three_prime_UTR 9738 9877 . - . ID=g6780.t1.utr3p1;Parent=g6780.t1 #PROT g6780.t1 g6780 MFAKVVVIDGAGHLVGRLASIVAKELLSGQKVVVVRCEELNITGSFIRNKTKYHHFLRKRNNIHPRKGPFHLRAPSRMFWRVVRGMLPHKTPRGAAALERLKVFEGVPPPYDKVKRVVVPDALRVLRLRPQRRFTVLGRLAHEVGWKYQDVVKTLEEKRKVKSAAFYQAKKALSKLRVKAASNKSKELTQVKQTLSQYGH* # ORIGINAL: g6778.t1 original gene structure, not modified by PASA NODE_1035_length_14529_cov_39.353 AUGUSTUS gene 5453 6949 . - . ID=g6778;Name=g6778.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS mRNA 5453 6949 . - . ID=g6778.t1;Parent=g6778;Name=g6778.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 5453 6949 . - . ID=g6778.t1.exon1;Parent=g6778.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 5453 6949 . - 0 ID=cds.g6778.t1;Parent=g6778.t1 #PROT g6778.t1 g6778 MFDYGMRDLFKKELAALHVRFYQLERLLGDFVPDVSEHFRKQGVEVEMFASHWFLTLFASKFPLDVAFYAMDLFLGDGMETHFRLSLAMLSLFKKELLSLSFEQIMAFFRIDLPRRFGDSPEQFDSLVESAILIRLSSKKIAQYEKDYHSGKGRDDVSTETNVAKKLEKENQRLKQRNAKLEKENESLAGDLVKVKVSLTQQLETLREANASLKEELRIAEENRRSALNDAEEQSRALEDELKSVKGLYRNNVGGLDEERKRIHDEVASVKLLLRVQTDKAEREISLLHKEVAVLKRELARAKRRMSTASAASASSERSSGAASAGAGETHSEDVHTLGVDHPLGRHSLVQDTQDLQADSVHDGRLESHGGDDGFVLSHIAAADETEQISAREIELERALRATEETLAKVKLQLVDAQCEREAYLYEKSHERAAERTEKADKDSKDKDKGESTSSAARDSKEALHAFVQQLPDFKDMKINRPAWMKKVLGGQKDAKDK* # ORIGINAL: g6777.t1 original gene structure, not modified by PASA NODE_1035_length_14529_cov_39.353 AUGUSTUS gene 1214 4086 . - . ID=g6777;Name=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS mRNA 1214 4086 . - . ID=g6777.t1;Parent=g6777;Name=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 3970 4086 . - . ID=g6777.t1.exon1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 3970 4086 . - 0 ID=cds.g6777.t1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 3606 3836 . - . ID=g6777.t1.exon2;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 3606 3836 . - 0 ID=cds.g6777.t1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 2869 3054 . - . ID=g6777.t1.exon3;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 2869 3054 . - 0 ID=cds.g6777.t1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 2255 2505 . - . ID=g6777.t1.exon4;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 2255 2505 . - 0 ID=cds.g6777.t1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 1835 1976 . - . ID=g6777.t1.exon5;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 1835 1976 . - 1 ID=cds.g6777.t1;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS exon 1214 1582 . - . ID=g6777.t1.exon6;Parent=g6777.t1 NODE_1035_length_14529_cov_39.353 AUGUSTUS CDS 1214 1582 . - 0 ID=cds.g6777.t1;Parent=g6777.t1 #PROT g6777.t1 g6777 MALYQLERYHRSCRDSEKAIECDPNWFKGHMRRGLALIELGEYGLARQALVKATAIAPSSVTDAVSAKMIELEVLVTHAVGEEAAAFKDGVCFGTFRVPLTHLSMFARYAAIHRAKPTSGRGRVSCGMCGKKIDKVMTCRGCGLQFYCNIACQKSHWLAHKKGCQLIRRLWDLQEELADLACVRRVANVDAEVKVRASALGHWIELVNMLTVDTSNTAIEPPVKGAGFMRGLPTDFTCCECFPNCAVGCSCEKSNLPCNSCRAMQSHKDMSSCRNPRLSNVWSTLKEPKDLSLCALDNYNKIAAVLQNPVECECPYGRPNRVHSTQKYPIGDLLSLRACEQCDTHRRQRSSADPGVCRDPIFFSVCRRITANHGHGPGSLVHCAKCGMCQVAGSAHCDDCGRCYYGSEWPCSNCHSMRFKANGDLEITAQQ* # PASA_UPDATE: g9261.t1, single gene model update, valid-1, status:[pasa:asmbl_4031,status:12],[pasa:asmbl_4032,status:12], valid-1 NODE_2319_length_6750_cov_38.9546 . gene 5932 6660 . - . ID=g9261;Name=g9261.t1 NODE_2319_length_6750_cov_38.9546 . mRNA 5932 6660 . - . ID=g9261.t1;Parent=g9261;Name=g9261.t1 NODE_2319_length_6750_cov_38.9546 . five_prime_UTR 6602 6660 . - . ID=g9261.t1.utr5p1;Parent=g9261.t1 NODE_2319_length_6750_cov_38.9546 . exon 6455 6660 . - . ID=g9261.t1.exon1;Parent=g9261.t1 NODE_2319_length_6750_cov_38.9546 . CDS 6455 6601 . - 0 ID=cds.g9261.t1;Parent=g9261.t1 NODE_2319_length_6750_cov_38.9546 . exon 5932 6217 . - . ID=g9261.t1.exon2;Parent=g9261.t1 NODE_2319_length_6750_cov_38.9546 . CDS 6131 6217 . - 0 ID=cds.g9261.t1;Parent=g9261.t1 NODE_2319_length_6750_cov_38.9546 . three_prime_UTR 5932 6130 . - . ID=g9261.t1.utr3p1;Parent=g9261.t1 #PROT g9261.t1 g9261 MWSLMSVAEQTGITLTDSLAMSPAASVSGLYFAHPQSEYFAVGKVGKDQVTDYAKRKNMSVEVVEKWLASTLAYETD* # PASA_UPDATE: g9260.t1, single gene model update, valid-1, status:[pasa:asmbl_4030,status:12], valid-1 NODE_2319_length_6750_cov_38.9546 . gene 160 5445 . - . ID=g9260;Name=g9260.t1 NODE_2319_length_6750_cov_38.9546 . mRNA 160 5445 . - . ID=g9260.t1;Parent=g9260;Name=g9260.t1 NODE_2319_length_6750_cov_38.9546 . five_prime_UTR 5374 5445 . - . ID=g9260.t1.utr5p1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 5235 5445 . - . ID=g9260.t1.exon1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 5235 5373 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 4892 5009 . - . ID=g9260.t1.exon2;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 4892 5009 . - 2 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 4681 4751 . - . ID=g9260.t1.exon3;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 4681 4751 . - 1 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 4358 4485 . - . ID=g9260.t1.exon4;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 4358 4485 . - 2 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 4041 4148 . - . ID=g9260.t1.exon5;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 4041 4148 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 3752 3863 . - . ID=g9260.t1.exon6;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 3752 3863 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 3466 3541 . - . ID=g9260.t1.exon7;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 3466 3541 . - 2 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 3197 3282 . - . ID=g9260.t1.exon8;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 3197 3282 . - 1 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 2832 2908 . - . ID=g9260.t1.exon9;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 2832 2908 . - 2 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 2361 2593 . - . ID=g9260.t1.exon10;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 2361 2593 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 2044 2146 . - . ID=g9260.t1.exon11;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 2044 2146 . - 1 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 1511 1702 . - . ID=g9260.t1.exon12;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 1511 1702 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 1221 1322 . - . ID=g9260.t1.exon13;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 1221 1322 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 784 915 . - . ID=g9260.t1.exon14;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 784 915 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 490 610 . - . ID=g9260.t1.exon15;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 490 610 . - 0 ID=cds.g9260.t1;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . exon 160 296 . - . ID=g9260.t1.exon16;Parent=g9260.t1 NODE_2319_length_6750_cov_38.9546 . CDS 160 296 . - 2 ID=cds.g9260.t1;Parent=g9260.t1;3_prime_partial=true #PROT g9260.t1 g9260 MLSLAGAQARRLVASVRASTPTFAREYHAKRGCYGFRTPVVAPLEEVSPEVILNRARNANVMRLVTAYRSHGHKKSEIDPLGLQERNAPELNLRLYGLEGSLADVVPLNGIVDMTGLKVKDRATAEAKLEDIVQHLENTYCGKIGVEFEHISNPAERAWFADNFERRRWKELTADEKKRMATLMAHSEVFDNFMQKRFGQVKRYGAEGAEAMMVAMDEIFRSSSELGVHDVVLCMPHRGRLNLLTDLLKFSPAAFFHKVKGNFEFPEGLGATGDVISHLTNSVDIDYGQPKPLHVTMIPNPSHLEACNPVAIGKTRAKQMFMRDGDYKNDSNCRLGDKALCVQVHGDAAFCAQGVVMETLSLSCLPHYTTGGSVHLIVNNQLGFTTPADRARSTRYSSDVGKMIEAPVLHVNGDCPEEVLRACRVAIEYRMRFKRDIIVDLICYRRHGHNELDDPSFTQPVMYDKIRKAKSVPKQFEEQLVADGILGAADIEAVRTAYWNHLDEQLKAAETFQPEADHLRGKWAGVKQATDSIVPVQTGVDIATLEFVGKHSVSFPPEMKIHKRLKKSHIDARLDQMAKRTEIDWATAEALAFGSLMLENYNVRISGQDVGRGTFSHRHVMLIDQDDDSAHVPLNTLAPTQGHIE # ORIGINAL: g13740.t1 original gene structure, not modified by PASA NODE_2030_length_8016_cov_37.9542 AUGUSTUS gene 7363 7869 . - . ID=g13740;Name=g13740.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS mRNA 7363 7869 . - . ID=g13740.t1;Parent=g13740;Name=g13740.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS exon 7363 7869 . - . ID=g13740.t1.exon1;Parent=g13740.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS CDS 7363 7869 . - 0 ID=cds.g13740.t1;Parent=g13740.t1 #PROT g13740.t1 g13740 MPALEKQKKGGGRSSAIEADARDKGRSRGGKQNQQQQQQQQQQQQQQQQQQSPNNSHRHQGHGQPYGPTDSHSEEDDGEGGEEDEETEGAAGSSSQGHAQGQQGQVHGQGQRGGYPRRGVRGVEGPRTTDSIRARAYKEKNKGQHGNHNRKAMADRKRGRGMSYVPPQ* # PASA_UPDATE: g13739.t1, single gene model update, valid-1, status:[pasa:asmbl_3314,status:3], valid-1 NODE_2030_length_8016_cov_37.9542 . gene 1887 6973 . + . ID=g13739;Name=g13739.t1 NODE_2030_length_8016_cov_37.9542 . mRNA 1887 6973 . + . ID=g13739.t1;Parent=g13739;Name=g13739.t1 NODE_2030_length_8016_cov_37.9542 . five_prime_UTR 1887 1961 . + . ID=g13739.t1.utr5p1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . five_prime_UTR 2141 2167 . + . ID=g13739.t1.utr5p2;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 1887 1961 . + . ID=g13739.t1.exon1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 2141 2333 . + . ID=g13739.t1.exon2;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 2168 2333 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 2598 2749 . + . ID=g13739.t1.exon3;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 2598 2749 . + 2 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 3008 3189 . + . ID=g13739.t1.exon4;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 3008 3189 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 3547 3613 . + . ID=g13739.t1.exon5;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 3547 3613 . + 1 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 3939 4175 . + . ID=g13739.t1.exon6;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 3939 4175 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 4348 4462 . + . ID=g13739.t1.exon7;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 4348 4462 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 4617 4773 . + . ID=g13739.t1.exon8;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 4617 4773 . + 2 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 5048 5148 . + . ID=g13739.t1.exon9;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 5048 5148 . + 1 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 5380 5501 . + . ID=g13739.t1.exon10;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 5380 5501 . + 2 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 5648 5863 . + . ID=g13739.t1.exon11;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 5648 5863 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 6123 6360 . + . ID=g13739.t1.exon12;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 6123 6360 . + 0 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . exon 6483 6973 . + . ID=g13739.t1.exon13;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . CDS 6483 6490 . + 2 ID=cds.g13739.t1;Parent=g13739.t1 NODE_2030_length_8016_cov_37.9542 . three_prime_UTR 6491 6973 . + . ID=g13739.t1.utr3p1;Parent=g13739.t1 #PROT g13739.t1 g13739 MATEGDDSLYPIAVLIDELKNDDVQLRLNAIRRLPTIALALGEERTRQELIPFLTDSIDDEDEVLLVLAEELGKFVPLVGGKQFAHCILVPLENLATVEETVVREKAVASLREVIIQLDSGHAEEYVVPLVKRIATGDWFTSRNSACGLFSAVYPKANPTLKAELRAVFAQLCHDETPMVRRAAGSKLGDFAKVVEAEYVKSDFVPLFVSLARDEQDSVRVLAIEASVSICGILSEADNDTLVMPVLRDAAQDKSWRVRYIVADKFTELQKALGKEITKNDLIQAYVRLLKDNEAEVRTAAAAKVPDFCTALDKDVQENSILNLVLPCVKELALDNSQHVRASLAGVIMGLAPVLGKEHTIEHLLPIFLQLLKDEFPEVRLNIISKLDCVNQVIGIELLSQSLLPAIVELAEDRQWRVRLAIIEYIPLLSSQLGVEFFDEKLSNLCMTWLGDCVFSIREAATMNLKRLAETFGAEWALSSIIPKVLSMARHPNYLYRMTTLFAINLLVDVLGPVPLEKTIVPVVTQMAQDTVANVRFNVARTLRKIILKVDKSVSNALIRNVLVGLQKDTDNDVKFFATEAIETIG* # ORIGINAL: g13738.t1 original gene structure, not modified by PASA NODE_2030_length_8016_cov_37.9542 AUGUSTUS gene 209 1298 . - . ID=g13738;Name=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS mRNA 209 1298 . - . ID=g13738.t1;Parent=g13738;Name=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS exon 824 1298 . - . ID=g13738.t1.exon1;Parent=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS CDS 824 1298 . - 0 ID=cds.g13738.t1;Parent=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS exon 591 683 . - . ID=g13738.t1.exon2;Parent=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS CDS 591 683 . - 2 ID=cds.g13738.t1;Parent=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS exon 209 318 . - . ID=g13738.t1.exon3;Parent=g13738.t1 NODE_2030_length_8016_cov_37.9542 AUGUSTUS CDS 209 318 . - 2 ID=cds.g13738.t1;Parent=g13738.t1 #PROT g13738.t1 g13738 MTSPYSSLKKMKRAPLSGHGPSPSPTPHHTRTFTDDNDDNDDNEDDGYERRRTAPHTTSSRPTSASAARPITRGHTRDSASTPNGTRQYTHSAMWQNPVERRDVDEDVHRSQSLHGYATASSFGSASHLRNSNGDRGPVDHSGRALPSGHTHSNAHAAEAELYRKESAGWEKAHLTDLRRRTEPRGAANPGVVGKVSDGDLVSSMASRLSQLEMELRASKKEIVEK # PASA_UPDATE: g9434.t1, single gene model update, valid-1, status:[pasa:asmbl_24,status:12],[pasa:asmbl_26,status:12], valid-1 NODE_1008_length_14792_cov_52.6549 . gene 9302 13861 . + . ID=g9434;Name=g9434.t1 NODE_1008_length_14792_cov_52.6549 . mRNA 9302 13861 . + . ID=g9434.t1;Parent=g9434;Name=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 9302 9398 . + . ID=g9434.t1.exon1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 9302 9398 . + 0 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 9664 9824 . + . ID=g9434.t1.exon2;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 9664 9824 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 10243 11113 . + . ID=g9434.t1.exon3;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 10243 11113 . + 0 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 11225 11350 . + . ID=g9434.t1.exon4;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 11225 11350 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 11661 11876 . + . ID=g9434.t1.exon5;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 11661 11876 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 12025 12222 . + . ID=g9434.t1.exon6;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 12025 12222 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 12603 12848 . + . ID=g9434.t1.exon7;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 12603 12848 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 13188 13367 . + . ID=g9434.t1.exon8;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 13188 13367 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . exon 13650 13861 . + . ID=g9434.t1.exon9;Parent=g9434.t1 NODE_1008_length_14792_cov_52.6549 . CDS 13650 13861 . + 2 ID=cds.g9434.t1;Parent=g9434.t1 #PROT g9434.t1 g9434 MMITGRISPRGLMLLVTVALTVVRVDAQAPYIESITGFDVTDINLVPPSTDKDWGWSTNTNNVGTTFSGPGSKDFHKKFEDYCSCSDPDAAQVPSTTRGKLYAPVLWPEGQLLALVQQGPHPLMSLFGATGSIISMYFNLNIGNRAMASVTAIAPDGTPTLDNFANVGTLIARACVTEHPNFASKDVYYINYVLFLARSTDGGKDGFRVCVRLGSVMRCSNHVSQAISLLTGHLATIVFDAVTTPGGPGGPGGPAGGPGASTTLNVHFYVDGVFLGSRPVPSYTADATVNRVYMGAIPSCAPLGSLGGAPSSCVRDCVYGNGGQSLNSNGNRLEMQRVIHVARKPAGTVNSDDWRRELDGFHCAFDGLIATPSCPQVCGDSFPIGTETCDTSYFCNNQTCGCSPGSTPLRTTTLRACQACPTNYACPDGVTRTLCTTSSDGTNTYQDQTGQSSCKVCPAKAVMQTDQLTGLVSCKCSAGRYLDTSINSCEACPINSFCINQVKTPCSTGQYQPNIQQGQCIPCPTGPVFTTAAAYAVCNCPNGFFKMASSTNWTCVECPGGYDCSSGALVPCSSLTYRPDGSSTLSCSRCPTITLASLSPLGGVIGTIVTTIVQLVPTDDRKSCVCSNGYYNIGSTCAGCPPGSRCTGGVRVECPPNRYSGAMADSCLPCATGLVAPANSSSCRCPDTQYQGQNGACIACPYGSECNGITMTPCPDGTVRGPTQIKCAPCPPPSTADPLRTSCLCPSGSFNNGTACISKQSARACTFV* # PASA_UPDATE: g9430.t1, single gene model update, valid-1, status:[pasa:asmbl_23,status:12], valid-1 NODE_1008_length_14792_cov_52.6549 . gene 2 2533 . + . ID=g9430;Name=g9430.t1 NODE_1008_length_14792_cov_52.6549 . mRNA 2 2533 . + . ID=g9430.t1;Parent=g9430;Name=g9430.t1 NODE_1008_length_14792_cov_52.6549 . five_prime_UTR 2 3 . + . ID=g9430.t1.utr5p1;Parent=g9430.t1 NODE_1008_length_14792_cov_52.6549 . exon 2 1592 . + . ID=g9430.t1.exon1;Parent=g9430.t1 NODE_1008_length_14792_cov_52.6549 . CDS 4 1592 . + 0 ID=cds.g9430.t1;Parent=g9430.t1;5_prime_partial=true NODE_1008_length_14792_cov_52.6549 . exon 1880 2533 . + . ID=g9430.t1.exon2;Parent=g9430.t1 NODE_1008_length_14792_cov_52.6549 . CDS 1880 2324 . + 1 ID=cds.g9430.t1;Parent=g9430.t1 NODE_1008_length_14792_cov_52.6549 . three_prime_UTR 2325 2533 . + . ID=g9430.t1.utr3p1;Parent=g9430.t1 #PROT g9430.t1 g9430 QRTPTVAAYDYSRAHYLNPFTCMSPCGKNYVVRVYRPEKGDTAQTFHLLIPPNMRAAKSFKLPITANVTTMTGIDYVQGIHAIPQRSPTIYPGNEDGAATSTPVDGGIAALALAEVVVPDSDMISLRLSLKTRATYDQQQAALWTDPTNNCPALCQAQQPGTDFSASIFSRHRSLAFSLEDWADSGATLTFEIVPDQANVLLGMQTYDGIFNQNGTAGHADTIAIIPDDTAPGAMRFAFCAPKTEMAASGVPDWMISAEEIAAREKALTNWRLWSCLGPRVDAKSSDSGLVRVQLSFRVARNVFGPSLDRYDILNGPSPDSVAGASADADVLVSYRANRTYEHVGLFAEIQRRVALWQYMFHQGTYAYFVGEAFAAKYEGFNFMNVSHLPSADVARLILDGVGSFGRYYPHPASDSATSTIGMMFGIVAEKLDLPVDDEVSDLLVPHAWVASLCHSIEFPSKDASAKHGSQQRPLVESMRKAMSGYYSCVSIPDTKPWPAALITPHSISVSGGHWSARAPSVTVFPEQDSDIAIAADNALGVVFDEAYYYGVNMFGIVPFLRAEYILLQHATLSTGFEKSQDGGTDNMSDDSDDSDFDNGGGGDSPSNNDNGDNSDGSSKKNHKAAIIVVAIVIPVIVVTMLVAGFMWYRRRQGLHGGVHYSPLNQLNLSDISLLET* # ORIGINAL: g9431.t1 original gene structure, not modified by PASA NODE_1008_length_14792_cov_52.6549 AUGUSTUS gene 2623 3294 . - . ID=g9431;Name=g9431.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS mRNA 2623 3294 . - . ID=g9431.t1;Parent=g9431;Name=g9431.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 3072 3294 . - . ID=g9431.t1.exon1;Parent=g9431.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 3072 3294 . - 0 ID=cds.g9431.t1;Parent=g9431.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 2623 2966 . - . ID=g9431.t1.exon2;Parent=g9431.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 2623 2966 . - 2 ID=cds.g9431.t1;Parent=g9431.t1 #PROT g9431.t1 g9431 MEGVADSAVDGVFLLCATNCPWELDPAFLRRFQKRVYIPLPDATARTRLVEILLAETPHTISAADVVEIVDRTAGFSGSDITTCMSDAFFEPLRELHSARVWQVDAATGCYVPSSEHATVGGAGCDLEHSDLLGSFVANLCELEPSRVVPRPLVLSDVLRSLDSNRSTVDATEIQEFQKFTEKYGQCG* # ORIGINAL: g9433.t1 original gene structure, not modified by PASA NODE_1008_length_14792_cov_52.6549 AUGUSTUS gene 6431 7893 . + . ID=g9433;Name=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS mRNA 6431 7893 . + . ID=g9433.t1;Parent=g9433;Name=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 6431 6520 . + . ID=g9433.t1.exon1;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 6431 6520 . + 0 ID=cds.g9433.t1;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 6687 6879 . + . ID=g9433.t1.exon2;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 6687 6879 . + 0 ID=cds.g9433.t1;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 7004 7124 . + . ID=g9433.t1.exon3;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 7004 7124 . + 2 ID=cds.g9433.t1;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 7493 7528 . + . ID=g9433.t1.exon4;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 7493 7528 . + 1 ID=cds.g9433.t1;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 7707 7893 . + . ID=g9433.t1.exon5;Parent=g9433.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 7707 7893 . + 1 ID=cds.g9433.t1;Parent=g9433.t1 #PROT g9433.t1 g9433 MSSATKLKHVSRELLNDLPRPEGDNQAVAKITAARGNNMHEVVLADGNTFLCMMPTKFRKKIWIKRGKSMSNGACSNVDAKNTLTKARTSVGEPRDYVIIEKLPNSEKLNLKVQAEIVHVLWTDHIRSLRKEGLWPVEFDKTVAEKGGDSDATEQAQGDAGAADDNDCSGSQSGSSDNDDAMYANPNRRSVVQDSEEEEEGTDSDDDG* # ORIGINAL: g9432.t1 original gene structure, not modified by PASA NODE_1008_length_14792_cov_52.6549 AUGUSTUS gene 3485 5426 . - . ID=g9432;Name=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS mRNA 3485 5426 . - . ID=g9432.t1;Parent=g9432;Name=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 5282 5426 . - . ID=g9432.t1.exon1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 5282 5426 . - 0 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 5075 5168 . - . ID=g9432.t1.exon2;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 5075 5168 . - 2 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 4736 4797 . - . ID=g9432.t1.exon3;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 4736 4797 . - 1 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 4514 4585 . - . ID=g9432.t1.exon4;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 4514 4585 . - 2 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 4226 4343 . - . ID=g9432.t1.exon5;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 4226 4343 . - 2 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 3852 3900 . - . ID=g9432.t1.exon6;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 3852 3900 . - 1 ID=cds.g9432.t1;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS exon 3485 3628 . - . ID=g9432.t1.exon7;Parent=g9432.t1 NODE_1008_length_14792_cov_52.6549 AUGUSTUS CDS 3485 3628 . - 0 ID=cds.g9432.t1;Parent=g9432.t1 #PROT g9432.t1 g9432 MLSDATDAFRRESRRRETASLQASTGTDLRSADDDSPASDIEVEHTNRALAIALRAEDIDGLPALSRADGQMDDKETRRRKCAIEATIVPQGSVSFDDIAGLHEAKRFLYEALVVPVKFPHFFIGARKPWKRILLYGPPGTGSCRPLLLPLIPSVTAVAIGDTRLIKELFAHARRQQNKAVIFVDEIDSLCRRRNDKEEEHTRRVKTELLKQACGLFVMGSSLSTLP* # ORIGINAL: g3090.t1 original gene structure, not modified by PASA NODE_4436_length_1620_cov_62.8324_potentialcontaminant AUGUSTUS gene 59 1384 . - . ID=g3090;Name=g3090.t1 NODE_4436_length_1620_cov_62.8324_potentialcontaminant AUGUSTUS mRNA 59 1384 . - . ID=g3090.t1;Parent=g3090;Name=g3090.t1 NODE_4436_length_1620_cov_62.8324_potentialcontaminant AUGUSTUS exon 59 1384 . - . ID=g3090.t1.exon1;Parent=g3090.t1 NODE_4436_length_1620_cov_62.8324_potentialcontaminant AUGUSTUS CDS 59 1384 . - 0 ID=cds.g3090.t1;Parent=g3090.t1 #PROT g3090.t1 g3090 MNNNPIFHGHNEHDVAELLAFLDHCVSHATSQSSDNQTYQARDDQTEACDDQTEACDDQTARDDQTEACEDQMETCDDQMKARDDQSDELTECDEQIELWDEQTNVYNEQTGASDSIACHNTGASDACEQTGESDASAFLEQTGAGATDNQTIACAASDEKTIATKWLQTHSWIDMRWLIDAEWLHTKPWRVTDEIAAKDAELAKYSNDRMLRTLSHTFCIPVLSKIHEDQLSKPAYTYVVKGKYIGKPVQINENDVCTSVDSLDAAALYLTNKVYDESDETVISFILCPSTTIMEYLVIIFRCMIVARQALAGSITEQQFHACYLSEHMIILTMADGKTIVLEARTDLIFRPAGVTYIFDTDKTGCQFPINFAMSHFWVRATITNRRPKNPRTKKPTNTTKRGRQTATQGGDDTVPKVAPRKADKTRIRSRRRFGSSDDQ* # ORIGINAL: g2906.t1 original gene structure, not modified by PASA NODE_5992_length_663_cov_1.30782_potentialcontaminant AUGUSTUS gene 1 663 . - . ID=g2906;Name=g2906.t1 NODE_5992_length_663_cov_1.30782_potentialcontaminant AUGUSTUS mRNA 1 663 . - . ID=g2906.t1;Parent=g2906;Name=g2906.t1 NODE_5992_length_663_cov_1.30782_potentialcontaminant AUGUSTUS exon 1 663 . - . ID=g2906.t1.exon1;Parent=g2906.t1 NODE_5992_length_663_cov_1.30782_potentialcontaminant AUGUSTUS CDS 1 663 . - 0 ID=cds.g2906.t1;Parent=g2906.t1 #PROT g2906.t1 g2906 KVLLLGDVVDAVGSGFGIDSKVLNPGVAGLPDFGLFGLTDAELDMAAASGNSTNSTGGSGFGSLRKIGVSIVYGGGKDKPWVVTGTKDNGIAIFQLGINLRLERSGANGALVFSCRVSGGLSVKSYVFSAFIPVDVPGEQMVFVLPEVKVAGVNVNELMGIGTEVRIEPSVEGLKAAADGVAGRAKELAAQARAEAERRLEELKQEAKARIRRLMAATKAE # ORIGINAL: g13406.t1 original gene structure, not modified by PASA NODE_1383_length_11656_cov_42.3653 AUGUSTUS gene 8203 11577 . - . ID=g13406;Name=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS mRNA 8203 11577 . - . ID=g13406.t1;Parent=g13406;Name=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 10500 11577 . - . ID=g13406.t1.exon1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 10500 11577 . - 0 ID=cds.g13406.t1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 9970 10101 . - . ID=g13406.t1.exon2;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 9970 10101 . - 2 ID=cds.g13406.t1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 9499 9809 . - . ID=g13406.t1.exon3;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 9499 9809 . - 2 ID=cds.g13406.t1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 9123 9348 . - . ID=g13406.t1.exon4;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 9123 9348 . - 0 ID=cds.g13406.t1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 8706 8920 . - . ID=g13406.t1.exon5;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 8706 8920 . - 2 ID=cds.g13406.t1;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 8203 8457 . - . ID=g13406.t1.exon6;Parent=g13406.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 8203 8457 . - 0 ID=cds.g13406.t1;Parent=g13406.t1 #PROT g13406.t1 g13406 MTDERVAIDMGTSPECVRVASVATVTTVVGLQSVSTATDWSTHLRHVSSGTEPIGTSDASVATVATMAIEVEEHVQPTSMDACTHVGEPRSPSAPCLTPLVRAASHVHGGEHSECCVDRQTADDVFIETNLPNTAGSVLSVAHPGLMHSADCDVARDTASGNAPNASEAVEGIRDVTMGTVAREEDDMTQPPACVALAESISFNNNDSVGGQLASRGGESASFPARQSCSVSTSTHTQPRGGLEVETFAAESAHTQPPASINDHHLFGLSCGATCNDAEQEDMVDSFVGTGAADEAVAPAMDCSGIPCRYPGMEDTHTHEQTHSDPARSEDDAMMAYSFHANHLIGDCDTHSEVSISDYAPTKGQVPPETPTRADERFSVDLVTPSSNMHTPVVNRKASYGGGDFMTSPYQPVANNNNSINQDKTNSHIINNNNTDNASTNINTNTKKRKAADDTPRSTRQKLSDGTNASPSEKRHRPKGGSVVVSFSGFKDGHVSHDIAFRTRLSTMVESNLGGTVRYESEFDHRISHVVVPSGCRTLKTLAAALTQRWIMSPEWIIDSVEAGKFLPEDAYGARYTATPFKGKLFILGQSFLRENAEKSHKIENARTLIEVLGKGRIISSESTLADGADYELVAESVTPRQPRQIVWSQVLDMIPGADSSVKSPFSAKQERTSSHPHSLVSCGVTMTTDNGHVADICKEDALISVPIVVDAVAVAGRQASQDAFTTPAIRRAESASG* # ORIGINAL: g13405.t1 original gene structure, not modified by PASA NODE_1383_length_11656_cov_42.3653 AUGUSTUS gene 3960 7595 . - . ID=g13405;Name=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS mRNA 3960 7595 . - . ID=g13405.t1;Parent=g13405;Name=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 7517 7595 . - . ID=g13405.t1.exon1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 7517 7595 . - 0 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 7008 7133 . - . ID=g13405.t1.exon2;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 7008 7133 . - 2 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 6780 6801 . - . ID=g13405.t1.exon3;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 6780 6801 . - 2 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 6373 6487 . - . ID=g13405.t1.exon4;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 6373 6487 . - 1 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 5702 5842 . - . ID=g13405.t1.exon5;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 5702 5842 . - 0 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 5304 5399 . - . ID=g13405.t1.exon6;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 5304 5399 . - 0 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 4897 4972 . - . ID=g13405.t1.exon7;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 4897 4972 . - 0 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 4524 4572 . - . ID=g13405.t1.exon8;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 4524 4572 . - 2 ID=cds.g13405.t1;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 3960 4092 . - . ID=g13405.t1.exon9;Parent=g13405.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 3960 4092 . - 1 ID=cds.g13405.t1;Parent=g13405.t1 #PROT g13405.t1 g13405 MNFFDQSLSLPRLRSALIRMEDTIIFGLIERAQFHRNAAIYEPGRFQFQDGFGGSFMDFFLFETEKLHAKVRRYTSPDEHPFFDGLPLPILPALDYPQILKDNSSVNVNAKIKEVYLNELIPAICVPGDDANYGSSATRDVECLQALSKRIHYGKFIAEAKFIDPVHHDEYVRLIKERDSAALDALLTNKEVEMRLLQRIKLKAAMYGQDITEQGPQESKDKKIDPQAVADLYEKWVIPLTKEVEVLYLLARLDGESDGTNGSNGGMFGLKRSDSLTL* # ORIGINAL: g13404.t1 original gene structure, not modified by PASA NODE_1383_length_11656_cov_42.3653 AUGUSTUS gene 2317 3601 . + . ID=g13404;Name=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS mRNA 2317 3601 . + . ID=g13404.t1;Parent=g13404;Name=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 2317 2435 . + . ID=g13404.t1.exon1;Parent=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 2317 2435 . + 0 ID=cds.g13404.t1;Parent=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 2801 2942 . + . ID=g13404.t1.exon2;Parent=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 2801 2942 . + 1 ID=cds.g13404.t1;Parent=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 3287 3601 . + . ID=g13404.t1.exon3;Parent=g13404.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 3287 3601 . + 0 ID=cds.g13404.t1;Parent=g13404.t1 #PROT g13404.t1 g13404 MELGVGRHLNGDGKTLLGNWVEERSVQRSFPPDEPTLNLKTGNRGIVSLDRSWEGNSTARTSYVSPSKDNVRKVGRRRELLEKAALEQACAEEEAARNAVPPQDPLMSITHSDFRKEIPARAPRDPSTRSPLYAQPATFWSEKAGEGAIDGVSMVADGRSPFRKNAAFSTPIEEDKGSIKPHQEATYKTRR* # ORIGINAL: g13403.t1 original gene structure, not modified by PASA NODE_1383_length_11656_cov_42.3653 AUGUSTUS gene 221 1613 . - . ID=g13403;Name=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS mRNA 221 1613 . - . ID=g13403.t1;Parent=g13403;Name=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 1581 1613 . - . ID=g13403.t1.exon1;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 1581 1613 . - 0 ID=cds.g13403.t1;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 1196 1342 . - . ID=g13403.t1.exon2;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 1196 1342 . - 0 ID=cds.g13403.t1;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 783 881 . - . ID=g13403.t1.exon3;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 783 881 . - 0 ID=cds.g13403.t1;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS exon 221 382 . - . ID=g13403.t1.exon4;Parent=g13403.t1 NODE_1383_length_11656_cov_42.3653 AUGUSTUS CDS 221 382 . - 0 ID=cds.g13403.t1;Parent=g13403.t1 #PROT g13403.t1 g13403 MITPKNSEPSMESVIIDRYEGGMLEGRYHGQGTAWFKGGHLYVGEFVRGKMHGAGKYVWEDGVEYEGQFTDNEVSGYGTYRWADGSTYVGEVKNGLRHGQGTFTCGSRTTVYTGAWAEGRRHGKGRLVFDKDELCYYDGEWVNNRKE # ORIGINAL: g3114.t1 original gene structure, not modified by PASA NODE_5934_length_679_cov_64.6589_potentialcontaminant AUGUSTUS gene 2 679 . + . ID=g3114;Name=g3114.t1 NODE_5934_length_679_cov_64.6589_potentialcontaminant AUGUSTUS mRNA 2 679 . + . ID=g3114.t1;Parent=g3114;Name=g3114.t1 NODE_5934_length_679_cov_64.6589_potentialcontaminant AUGUSTUS exon 2 679 . + . ID=g3114.t1.exon1;Parent=g3114.t1 NODE_5934_length_679_cov_64.6589_potentialcontaminant AUGUSTUS CDS 2 679 . + 2 ID=cds.g3114.t1;Parent=g3114.t1 #PROT g3114.t1 g3114 HSMPETQDVDIRELVARTGSLDIQNAANIGHPTQPGGPQRLLYVDVLNFGFTSKGELDEGMVRVFVRAARASNFTIKVFIDAGMATEALEKWRRRREKEVATGEKRMQHGLSTILGDAFREQKIEVCYSLEADNDDTIAAHAHADGADILSGDTDFFRYIGAQYRVYKDFELKCIDGVPTELVLIPHTRCDTRAGKLQVRKPPPAYTNDPHTASFVPILVRDRLY # ORIGINAL: g2013.t1 original gene structure, not modified by PASA NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS gene 14037 15041 . - . ID=g2013;Name=g2013.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS mRNA 14037 15041 . - . ID=g2013.t1;Parent=g2013;Name=g2013.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 14037 15041 . - . ID=g2013.t1.exon1;Parent=g2013.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 14037 15041 . - 0 ID=cds.g2013.t1;Parent=g2013.t1 #PROT g2013.t1 g2013 MEQFNADIDSLFQGMFGPDFEQTVPDFNADSLSATSADIHQQETSESSAPEPSVQYTFEATQTEMLTPRMSTRTPELDGEPQIDNWTSEEVMTIRTPEVDGEPHIDNWASEEVMTMQTPGISKEAQSPTERAASIVTVGPFSFGPGDAVMIKVDDSNESEQPALVSDVKTDRKTGEKLIVIEWLYGPTDSIIEYPQPLVKSNDCFSNQELFRSNHVQTVHVKTVNGPCRVQSIQGFLRSAPYSRQCFMRTSIRIRRENPTVICRIGKISCIGCRKIVNPDKASDENVLVLCTKCNRLSHMTCMKRRQTLRPAPTFKSKYTSCCCVSEKYHLTVN* # ORIGINAL: g2011.t1 original gene structure, not modified by PASA NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS gene 10252 10646 . + . ID=g2011;Name=g2011.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS mRNA 10252 10646 . + . ID=g2011.t1;Parent=g2011;Name=g2011.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 10252 10439 . + . ID=g2011.t1.exon1;Parent=g2011.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 10252 10439 . + 0 ID=cds.g2011.t1;Parent=g2011.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 10616 10646 . + . ID=g2011.t1.exon2;Parent=g2011.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 10616 10646 . + 1 ID=cds.g2011.t1;Parent=g2011.t1 #PROT g2011.t1 g2011 MACSSQNFVVIKSAFRKKPKPYNPYKPAGHQVKSAVKHVHFEDGPVYRQATPSPPPMSPGQRRQRRARQRQR* # ORIGINAL: g2009.t1 original gene structure, not modified by PASA NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS gene 5341 5577 . - . ID=g2009;Name=g2009.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS mRNA 5341 5577 . - . ID=g2009.t1;Parent=g2009;Name=g2009.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 5341 5577 . - . ID=g2009.t1.exon1;Parent=g2009.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 5341 5577 . - 0 ID=cds.g2009.t1;Parent=g2009.t1 #PROT g2009.t1 g2009 MSTAMSIRNLSQLACSSIIALIGSSECGSPNSTQLAAIKNDRSKTSSVLTGTPPIGIGIRLTAPVPTGNGSLMVDDGR* # ORIGINAL: g2012.t1 original gene structure, not modified by PASA NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS gene 13180 13545 . - . ID=g2012;Name=g2012.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS mRNA 13180 13545 . - . ID=g2012.t1;Parent=g2012;Name=g2012.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 13180 13545 . - . ID=g2012.t1.exon1;Parent=g2012.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 13180 13545 . - 0 ID=cds.g2012.t1;Parent=g2012.t1 #PROT g2012.t1 g2012 MITATCTPKSHHNMHTANKCIIYARVRDCSSAFRGTQRELRTDIDGKREGTTILVTNADRFSRNTNRGAELLNHICQKGCAVVSILDNVNTNSTMGRFYLLHGMIVDGAAEQQHWRQDPSG* # ORIGINAL: g2010.t1 original gene structure, not modified by PASA NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS gene 8002 8607 . + . ID=g2010;Name=g2010.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS mRNA 8002 8607 . + . ID=g2010.t1;Parent=g2010;Name=g2010.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS exon 8002 8607 . + . ID=g2010.t1.exon1;Parent=g2010.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant AUGUSTUS CDS 8002 8607 . + 0 ID=cds.g2010.t1;Parent=g2010.t1 #PROT g2010.t1 g2010 MAKSGKTATLSMASLQECLELRIAEQAKRIETLEAAVANLTTDDSSKENAAPAEPTRPKRSKSAATYYALSVKDVLREKNPGLTTKELATKIADNWERMSEKKQKPFYDLETEDKLRYNKEKTDMKKQGTYVKKPKRALSAYNFFMKDEFSKVREQNPTMRHTEVVAEIGRIWKSLSDGDKKPYIRLAEADKLQRNEAVTA* # PASA_UPDATE: g2008.t1, single gene model update, valid-1, status:[pasa:asmbl_8078,status:12], valid-1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . gene 2 918 . + . ID=g2008;Name=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . mRNA 2 918 . + . ID=g2008.t1;Parent=g2008;Name=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . five_prime_UTR 2 3 . + . ID=g2008.t1.utr5p1;Parent=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . exon 2 361 . + . ID=g2008.t1.exon1;Parent=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . CDS 4 361 . + 0 ID=cds.g2008.t1;Parent=g2008.t1;5_prime_partial=true NODE_544_length_21492_cov_21.4767_potentialcontaminant . exon 641 918 . + . ID=g2008.t1.exon2;Parent=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . CDS 641 879 . + 2 ID=cds.g2008.t1;Parent=g2008.t1 NODE_544_length_21492_cov_21.4767_potentialcontaminant . three_prime_UTR 880 918 . + . ID=g2008.t1.utr3p1;Parent=g2008.t1 #PROT g2008.t1 g2008 ASHELPSLVVLNGCFTASAAKELNATFVIANEEKVAIHDAEAFGKLFLRALANDKSGNKKPWKEEALVSQACNYANLTVRDGQTSANASGQHAGSVNVPSHTIDDDASTDVHVIVSGYSFFTLHTPKPHKRRCTPTCGCMTVLSIVLFFVVVAIVLFVLYEQGVFTPHDGTLDYLTSMTTHYNYPDYTWPAFNITSPL* # PASA_UPDATE: g3194.t1, single gene model update, valid-1, status:[pasa:asmbl_9597,status:12], valid-1 NODE_832_length_17202_cov_38.4308 . gene 45 2690 . + . ID=g3194;Name=g3194.t1 NODE_832_length_17202_cov_38.4308 . mRNA 45 2690 . + . ID=g3194.t1;Parent=g3194;Name=g3194.t1 NODE_832_length_17202_cov_38.4308 . five_prime_UTR 45 45 . + . ID=g3194.t1.utr5p1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 45 133 . + . ID=g3194.t1.exon1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 46 133 . + 0 ID=cds.g3194.t1;Parent=g3194.t1;5_prime_partial=true NODE_832_length_17202_cov_38.4308 . exon 433 507 . + . ID=g3194.t1.exon2;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 433 507 . + 2 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 795 880 . + . ID=g3194.t1.exon3;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 795 880 . + 2 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 1058 1159 . + . ID=g3194.t1.exon4;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 1058 1159 . + 0 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 1296 1378 . + . ID=g3194.t1.exon5;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 1296 1378 . + 0 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 1631 1766 . + . ID=g3194.t1.exon6;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 1631 1766 . + 1 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 2066 2203 . + . ID=g3194.t1.exon7;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 2066 2203 . + 0 ID=cds.g3194.t1;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . exon 2505 2690 . + . ID=g3194.t1.exon8;Parent=g3194.t1 NODE_832_length_17202_cov_38.4308 . CDS 2505 2690 . + 0 ID=cds.g3194.t1;Parent=g3194.t1 #PROT g3194.t1 g3194 TTLLLLQNGAKANATNDRNKTASMTAAFVGQHECASLINNFFPFSHLEYFTKPQGLETEPKLKPEMGPILHGYVLLNNLNPARVALYLSANPGLLTKNTWRVLDMLVDRSLLNGRNQVMSMKLHYLTRIFEECLKDGGPDKFVKSMLATGDTDPFPYGQEAFIRQAIRTYKFTETDVLEQLVRAIAPVLPGNEPTALACLTSQINGMRSAGSVTAEDKCVACGATGSKLRCSACKSVVYCSRDCQKIHRFAHKKFCFPAAVQSAAPDGTPVPTAAPEAAVAPEAAEAAAISAPPQAE* # ORIGINAL: g3197.t1 original gene structure, not modified by PASA NODE_832_length_17202_cov_38.4308 AUGUSTUS gene 16177 17105 . + . ID=g3197;Name=g3197.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS mRNA 16177 17105 . + . ID=g3197.t1;Parent=g3197;Name=g3197.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 16177 16839 . + . ID=g3197.t1.exon1;Parent=g3197.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 16177 16839 . + 0 ID=cds.g3197.t1;Parent=g3197.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 17043 17105 . + . ID=g3197.t1.exon2;Parent=g3197.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 17043 17105 . + 0 ID=cds.g3197.t1;Parent=g3197.t1 #PROT g3197.t1 g3197 MGDRGGPRGRGTFRGRGDGFKGSRGDDRGGFGGGIGSRGGASSAFRGSYPGTPARGGGFGSNRGGFGSDRGGFGSDRGGFGSDRGGFGSDRGNFGSDRGGFRGDYGGSRGGSRGGFGDRGRFDAEGGNFGNGGGERGHRGAWGDSRGGRGGRGGRGGEHFGGSSERFDRREYGDGNQDAEGHGGDDRQREHGGHGRSDGERRGGRGGSRGGRGYDGGEGFEERRRPEVDEATLSYFQRVER* # ORIGINAL: g3196.t1 original gene structure, not modified by PASA NODE_832_length_17202_cov_38.4308 AUGUSTUS gene 13508 15143 . - . ID=g3196;Name=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS mRNA 13508 15143 . - . ID=g3196.t1;Parent=g3196;Name=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 15000 15143 . - . ID=g3196.t1.exon1;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 15000 15143 . - 0 ID=cds.g3196.t1;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 14502 14783 . - . ID=g3196.t1.exon2;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 14502 14783 . - 0 ID=cds.g3196.t1;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 13909 14067 . - . ID=g3196.t1.exon3;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 13909 14067 . - 0 ID=cds.g3196.t1;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS exon 13508 13669 . - . ID=g3196.t1.exon4;Parent=g3196.t1 NODE_832_length_17202_cov_38.4308 AUGUSTUS CDS 13508 13669 . - 0 ID=cds.g3196.t1;Parent=g3196.t1 #PROT g3196.t1 g3196 MARGALKAAVERFISRSDVVIADSLNYIKGFRYELFCVAKGQRTLSCVVQCEANVEQCLAWNGARRTASATAGQVAEEGASGDASPNMCPPAGDCYTDAHVRELIARFECPDGRSRWDSPLFFVQPDDVTPCEAVARAVTEAVNPTVKPNQATLAPPLSSSDFVYELDQITQSILNDVLAAQPPCELAVTDAKHKIILSRAVTLAELRRLRRQFIQITKTNNTMHGSAVDNAKQIGALFVEYLNTNLS* # PASA_UPDATE: g3195.t1, single gene model update, valid-1, status:[pasa:asmbl_9595,status:12],[pasa:asmbl_9596,status:12], valid-1 NODE_832_length_17202_cov_38.4308 . gene 3364 13011 . - . ID=g3195;Name=g3195.t1 NODE_832_length_17202_cov_38.4308 . mRNA 3364 13011 . - . ID=g3195.t1;Parent=g3195;Name=g3195.t1 NODE_832_length_17202_cov_38.4308 . five_prime_UTR 12827 13011 . - . ID=g3195.t1.utr5p1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 12416 13011 . - . ID=g3195.t1.exon1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 12416 12826 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 12014 12154 . - . ID=g3195.t1.exon2;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 12014 12154 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 11193 11333 . - . ID=g3195.t1.exon3;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 11193 11333 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 10618 10900 . - . ID=g3195.t1.exon4;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 10618 10900 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 10186 10379 . - . ID=g3195.t1.exon5;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 10186 10379 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 9538 9773 . - . ID=g3195.t1.exon6;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 9538 9773 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 9298 9407 . - . ID=g3195.t1.exon7;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 9298 9407 . - 1 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 8851 8919 . - . ID=g3195.t1.exon8;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 8851 8919 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 8613 8681 . - . ID=g3195.t1.exon9;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 8613 8681 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 8254 8369 . - . ID=g3195.t1.exon10;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 8254 8369 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 7727 7873 . - . ID=g3195.t1.exon11;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 7727 7873 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 7297 7459 . - . ID=g3195.t1.exon12;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 7297 7459 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 6848 7015 . - . ID=g3195.t1.exon13;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 6848 7015 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 6573 6638 . - . ID=g3195.t1.exon14;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 6573 6638 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 6264 6384 . - . ID=g3195.t1.exon15;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 6264 6384 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 5580 5927 . - . ID=g3195.t1.exon16;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 5580 5927 . - 1 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 4848 5247 . - . ID=g3195.t1.exon17;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 4848 5247 . - 1 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 4320 4515 . - . ID=g3195.t1.exon18;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 4320 4515 . - 0 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . exon 3364 3937 . - . ID=g3195.t1.exon19;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . CDS 3606 3937 . - 2 ID=cds.g3195.t1;Parent=g3195.t1 NODE_832_length_17202_cov_38.4308 . three_prime_UTR 3364 3605 . - . ID=g3195.t1.utr3p1;Parent=g3195.t1 #PROT g3195.t1 g3195 MATSAAPPVRPPLSPLKEDEEDSATDTAEDAGALASMAAGDSNNNNNNSGENVAAVTATKEGTAHARIVASQKGRKLDSALESAAFVFVAWVIGYFGLSIAFGAAIALGAFVLARRRRDRLLDDMATEAEKIGREREVEMAEFETTEWLNSLLDRVWYFAEPSLCKQITDALDPVLKENKPGFIDSIQIKQFTLGKRAPHIRSARVLNPLKGETAPISGVDPSWYSSVPPHRVILDVDLVYNAPLSRIILSIVVGRGGISVGLPVEVKEIQFGGKMRIELILGSVMPHVTKAAISFLAPPIFDIGITPLKAVDIMDLPGLSNWIRGLVVGGITGAMLAPKKIIVNIADPGKEAGASEAALKSNRRPARAVLLVRVHEGSGFDIDRGGLGKIDGYCSVRIATQKRRTRTERMGKGSVPQWDQTLALLVRDPASESVGIWVRGRRSVLGKVELGFETFAVASIADGSFNEGTLRVEKMGGSIRISFVYVTLPDVSQALMKTPALPDKVNKDAAISEKLERAPAEPALKRLTSPGGVLMIRVHEGKSLLAMDNDGLSDPFAVVNLVDVRGKRQVIKTAAVRNSLAPVWDTQKEVLLRDYRTSRINIAVSDFDDVSDHDLIGSAYIDIRSFLEGKNSFEIAPGCYAVERVWISLDYEVRQGKLKVDRYGRSITTSGFVSISLVFRPCNVTYDEGSSSDVAREQAVDNLEKSAVSSGISQLGKIGVGGARAFVSGMSSMTGTVTGAKKKAALGAGNGGSLRCKVIGARNLEAKDKNGLSDPFCVVKLGGKTVHKTPVVKESLNPSWNTEFEAAVIDRFRERVLFIVKDKDPLGSDRIGRCSLALSDSTVLTGEPKWFPLDGAESGEICVAITMMADANDALLTMSCAATEEDIRRIELERSAIPDPSLRKTTGIADAPVALATGTVKAVAATGSAVIQGGAAVGSAVVLGSANAVSTGANVLASGASTIAGGIVGGGTAFLSGANDLRKRATTLPASMVGRGSSKGLDVPAADENDGKAKGKSDGGKSPAKGDKDKDKDKGKQRADESDQLSKARTLSVSASTTAKPDDAQGGHARTLSEGGGSVSSRAPDTDDDGSIGKVSQSSMRNAKDKKYIRVVLRIHGARNLPEGKDKALVKVGGWSSKSLKTKKVALGKGAVDWNESLDFGRTSYKPNADIVAQVRISHGPFGRTDVVEFRVHLPADVTTEGYSAQLWCQAAATTQGASSPQLQLTIDVRPEPDA* # PASA_UPDATE: g8937.t1, single gene model update, valid-1, status:[pasa:asmbl_9838,status:12], valid-1 NODE_889_length_16227_cov_41.2115 . gene 3163 6042 . - . ID=g8937;Name=g8937.t1 NODE_889_length_16227_cov_41.2115 . mRNA 3163 6042 . - . ID=g8937.t1;Parent=g8937;Name=g8937.t1 NODE_889_length_16227_cov_41.2115 . five_prime_UTR 5904 6042 . - . ID=g8937.t1.utr5p1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 5747 6042 . - . ID=g8937.t1.exon1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 5747 5903 . - 0 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 5362 5548 . - . ID=g8937.t1.exon2;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 5362 5548 . - 2 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 4896 5191 . - . ID=g8937.t1.exon3;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 4896 5191 . - 1 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 4532 4695 . - . ID=g8937.t1.exon4;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 4532 4695 . - 2 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 4045 4316 . - . ID=g8937.t1.exon5;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 4045 4316 . - 0 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . exon 3163 3844 . - . ID=g8937.t1.exon6;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . CDS 3460 3844 . - 1 ID=cds.g8937.t1;Parent=g8937.t1 NODE_889_length_16227_cov_41.2115 . three_prime_UTR 3163 3459 . - . ID=g8937.t1.utr3p1;Parent=g8937.t1 #PROT g8937.t1 g8937 MSQHFKFAAFAALAQVMFILFFGLFTEYAPELDGHNQADDIGIIYSFFQDVHVMILVGFGFLMTFLRRYSFSAVGFNFLISAFIIQWSMFTLGFFHQLLTNDGNHWHPIRLSVESLISSDFAAASCLIAFGAVIGKTSPLQLLVSSMIQAVFYSLNEAICYQKFKLADAGGSITIHTFGAYFGLTVSLFIGNEKTVAHKNNKSTYNSDIFAMIGTLFLWMFWPSFNGALTTGPQQHRVVLNTILSLCACCVAAFLSSTLLRPARKFEMVDIQNATLAGGVAVGAVADMYIRPYGATLVGATAGCLSTVGYVFLQPRIEKLLKLQDTCGVNNLHGMPGLLGGIASVVAAGVASYGVYGSSLYVVFPARDPAGRDWDAQHQALMQLASIGVTLALAISGGALASLVIRLPFFGSPEPEFAFLDAVHWEMPHGDEEGGHGSSSASYGGDEGEGQLAANKREAMEMAVKGIGIPMADVESSSSSSAEKLH* # ORIGINAL: g8935.t1 original gene structure, not modified by PASA NODE_889_length_16227_cov_41.2115 AUGUSTUS gene 670 1386 . + . ID=g8935;Name=g8935.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS mRNA 670 1386 . + . ID=g8935.t1;Parent=g8935;Name=g8935.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 670 1386 . + . ID=g8935.t1.exon1;Parent=g8935.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 670 1386 . + 0 ID=cds.g8935.t1;Parent=g8935.t1 #PROT g8935.t1 g8935 MLLALPVELLADVIGTYLVPDPLSFVAIGATCASLRKFVWGSDAFIRARAHLNNTPPPHGLHEIPITQRVAWFASTILGHCEACGNRKSTGIPGSEGLCLPCFYIKDDLTTSRSTFTTAKRLFRIPDEVLEFAPQTHHRNPHYRSAPAMRLYRAVDLVRAAITIYGSERAYMAILGNPSRHSTGATVRRLNKAAVAAFLETYGGCSASDAPSSLQTVFAAFYEAHRAKVQGENGSFAA* # ORIGINAL: g8938.t1 original gene structure, not modified by PASA NODE_889_length_16227_cov_41.2115 AUGUSTUS gene 8370 11778 . + . ID=g8938;Name=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS mRNA 8370 11778 . + . ID=g8938.t1;Parent=g8938;Name=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 8370 9041 . + . ID=g8938.t1.exon1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 8370 9041 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 9195 9674 . + . ID=g8938.t1.exon2;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 9195 9674 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 10042 10239 . + . ID=g8938.t1.exon3;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 10042 10239 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 10437 10574 . + . ID=g8938.t1.exon4;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 10437 10574 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 10754 10993 . + . ID=g8938.t1.exon5;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 10754 10993 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 11170 11293 . + . ID=g8938.t1.exon6;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 11170 11293 . + 0 ID=cds.g8938.t1;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 11423 11778 . + . ID=g8938.t1.exon7;Parent=g8938.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 11423 11778 . + 2 ID=cds.g8938.t1;Parent=g8938.t1 #PROT g8938.t1 g8938 MTDRGGRLAPTIAVEAPSRSTLGDTRESRFSSDSSASSSSSSKDENNARNGNKQSPRKEPMSDAKGEKRKMPKLDGEGKRRDGSSGSAEKKSEDDDHMPAISVRTSPQQSASVMKKNHSLSRLDYDSGSITELEKTGKAKKQKKRSMPIVEAPTPTSVASSTDTNFIPEPSIKSKEKSTANTKKSSFTASHYDNAKGGGLGVESVYRPRSAANETGEMDFLEMPVKNLFDSYSSEKDDCVSKSGFLKFLWAAGLRETDPRLTVSMRKFSAAPARMNYDEFKDCVRPNFDLISRAIRGDFIIPDFPLFCKDIKEIYDVTKSINDGNVATYIPQLARVDPSYYAVSVCTVSGQRYDVGDSNVEFCIQSCCKPINYCLALEEHGPDWVHNYVGREPSGRHFNDLVLNDRGLPHNPMINAGAIMTCSMLKPKLALADKFDYVIKQCTKLAGGAKVGFSNSTYLSEKDTADRNYALGYYMREKNGFPPGTKLLEVLEFYFQCCSIEMTNEAMAVIAATLANGGVCPITDERVFDPATVRDCLSLMYSCGMYDYSGEFAFTIGLPSKSGVAGAIMIVIPNVMGICTWSPKLDTHGNSVRGIEFCKQLCSRFNFHNFDLVYTGDSRRDPTKRKDQGKLASMIELMFATQSADLSAVRRQWVAGADINGADYDGRTPLHVAASEGHLSIIRYLVKLGAVVNPVDRWGGTPLDDAIRTGKQEVIGALKGLGAESGRAIMEKMSK* # PASA_UPDATE: g8939.t1, single gene model update, valid-1, status:[pasa:asmbl_9840,status:12],[pasa:asmbl_9841,status:12], valid-1 NODE_889_length_16227_cov_41.2115 . gene 12519 16097 . + . ID=g8939;Name=g8939.t1 NODE_889_length_16227_cov_41.2115 . mRNA 12519 16097 . + . ID=g8939.t1;Parent=g8939;Name=g8939.t1 NODE_889_length_16227_cov_41.2115 . five_prime_UTR 12519 12570 . + . ID=g8939.t1.utr5p1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 12519 12654 . + . ID=g8939.t1.exon1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 12571 12654 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 12998 13078 . + . ID=g8939.t1.exon2;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 12998 13078 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 13442 13513 . + . ID=g8939.t1.exon3;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 13442 13513 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 13741 14706 . + . ID=g8939.t1.exon4;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 13741 14706 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 15050 15115 . + . ID=g8939.t1.exon5;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 15050 15115 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 15357 15509 . + . ID=g8939.t1.exon6;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 15357 15509 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 15739 15780 . + . ID=g8939.t1.exon7;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 15739 15780 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . exon 16026 16097 . + . ID=g8939.t1.exon8;Parent=g8939.t1 NODE_889_length_16227_cov_41.2115 . CDS 16026 16097 . + 0 ID=cds.g8939.t1;Parent=g8939.t1 #PROT g8939.t1 g8939 MAAAPDIDLASLASEFALIREKIAETAKLHDAVAALQAELINTKDSLVQLHIIVKEQDDEIHALKAALARADTQPPVNEPPLSAPPVPAAPAPSPITPTPDAAPSPRAPAGGRRLERTSTIDLALEELLAEMEKRNEERTESAPKKAHDALARQSAPPNVMFESEKSRPMTFMDRFRALQGGDKKKDRPSSASAGGLKSPRSPVTPTAIPSLDFLVDSSEGSSGAAKGRTLGRHEEMRALAASLAASSDASELRRVSDSPTPQRIELSAPPARRASDQPHTSTVNTTQMLQQQQQQQEQPQQSLSASAASSSTQASAVPMTAPSAPRPAIPTQPKPVGESTPDVSGGYGGSVEEPMYQNVAEVLAGIKTRSEDGSAERKAAAPPEASIFSGYLTKQGGKTKTLKRRWFVLTATNLRYFKTTTEEAQSYASLGNIELTSNTKITLTPEKRACSFEIDAAQRTFFIFADDEKSLSEWIAAIEGAIAKLPKILTDEEHRECVAAFQQYVNEVCI* # ORIGINAL: g8936.t1 original gene structure, not modified by PASA NODE_889_length_16227_cov_41.2115 AUGUSTUS gene 2080 2888 . + . ID=g8936;Name=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS mRNA 2080 2888 . + . ID=g8936.t1;Parent=g8936;Name=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 2080 2238 . + . ID=g8936.t1.exon1;Parent=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 2080 2238 . + 0 ID=cds.g8936.t1;Parent=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 2351 2603 . + . ID=g8936.t1.exon2;Parent=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 2351 2603 . + 0 ID=cds.g8936.t1;Parent=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS exon 2758 2888 . + . ID=g8936.t1.exon3;Parent=g8936.t1 NODE_889_length_16227_cov_41.2115 AUGUSTUS CDS 2758 2888 . + 2 ID=cds.g8936.t1;Parent=g8936.t1 #PROT g8936.t1 g8936 MVSLPLSQRPGDWVYLGFFLVNLPFIVYFVDMEQLVIADPYNFEYPIFPPPAMVDLVHAYAREYDPVLLARPVWWKVTIWWDSLFFGPFYAFAIYAFIKGRDWIRIPAIIYSSVILTILTVILSEETWGPHKARQWEIVMALNAPWLLIPLSLLIKMVRNEKPFSIEEPVASKQKSKKVA* # ORIGINAL: g6060.t1 original gene structure, not modified by PASA NODE_3539_length_3243_cov_31.7105 AUGUSTUS gene 2151 3060 . - . ID=g6060;Name=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS mRNA 2151 3060 . - . ID=g6060.t1;Parent=g6060;Name=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 3040 3060 . - . ID=g6060.t1.exon1;Parent=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 3040 3060 . - 0 ID=cds.g6060.t1;Parent=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 2789 2842 . - . ID=g6060.t1.exon2;Parent=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 2789 2842 . - 0 ID=cds.g6060.t1;Parent=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 2151 2426 . - . ID=g6060.t1.exon3;Parent=g6060.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 2151 2426 . - 0 ID=cds.g6060.t1;Parent=g6060.t1 #PROT g6060.t1 g6060 MALDILKRLTNANSEIVDVLLSRNQILQALRFMRGQGQDASISARQFLEAAANTKDPILFYSIFKFFEQRNVRLRKHPAFIEADKCDDIVEKFRATFGSAAAVSNPSRYDFGDDDG* # ORIGINAL: g6059.t1 original gene structure, not modified by PASA NODE_3539_length_3243_cov_31.7105 AUGUSTUS gene 322 1262 . + . ID=g6059;Name=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS mRNA 322 1262 . + . ID=g6059.t1;Parent=g6059;Name=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 322 361 . + . ID=g6059.t1.exon1;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 322 361 . + 0 ID=cds.g6059.t1;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 575 615 . + . ID=g6059.t1.exon2;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 575 615 . + 2 ID=cds.g6059.t1;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 773 900 . + . ID=g6059.t1.exon3;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 773 900 . + 0 ID=cds.g6059.t1;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS exon 1172 1262 . + . ID=g6059.t1.exon4;Parent=g6059.t1 NODE_3539_length_3243_cov_31.7105 AUGUSTUS CDS 1172 1262 . + 1 ID=cds.g6059.t1;Parent=g6059.t1 #PROT g6059.t1 g6059 MASNNSTLEPYVNHEVAVITNDGRVIVGKLKGFDQTINVIMEGSHERVYSTTSGVERVPLGLYIVRGDNICLVGTVDEEIDESLDFGEIRAAPLNAVQH* # PASA_UPDATE: g737.t1, single gene model update, valid-1, status:[pasa:asmbl_96,status:12], valid-1 NODE_1028_length_14555_cov_40.0361 . gene 6491 12297 . + . ID=g737;Name=g737.t1 NODE_1028_length_14555_cov_40.0361 . mRNA 6491 12297 . + . ID=g737.t1;Parent=g737;Name=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 6491 6627 . + . ID=g737.t1.exon1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 6491 6627 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 6770 6922 . + . ID=g737.t1.exon2;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 6770 6922 . + 1 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 7412 7646 . + . ID=g737.t1.exon3;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 7412 7646 . + 1 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 7989 8165 . + . ID=g737.t1.exon4;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 7989 8165 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 8369 8626 . + . ID=g737.t1.exon5;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 8369 8626 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 8793 8894 . + . ID=g737.t1.exon6;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 8793 8894 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 9046 9978 . + . ID=g737.t1.exon7;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 9046 9978 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 10225 10333 . + . ID=g737.t1.exon8;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 10225 10333 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 10639 10751 . + . ID=g737.t1.exon9;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 10639 10751 . + 2 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 10991 11070 . + . ID=g737.t1.exon10;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 10991 11070 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 11315 11351 . + . ID=g737.t1.exon11;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 11315 11351 . + 1 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 11515 11610 . + . ID=g737.t1.exon12;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 11515 11610 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 11760 11882 . + . ID=g737.t1.exon13;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 11760 11882 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . exon 12004 12297 . + . ID=g737.t1.exon14;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . CDS 12004 12111 . + 0 ID=cds.g737.t1;Parent=g737.t1 NODE_1028_length_14555_cov_40.0361 . three_prime_UTR 12112 12297 . + . ID=g737.t1.utr3p1;Parent=g737.t1 #PROT g737.t1 g737 MFVHSASNLPTRDGQLPSTFVTAKTEREAAERQPAKAATHAAELSSNPVWEEVLIVHVPEDAVARGEGIRLTVADNVTKRCLTRFDLPVGNLAPYHQYNLDLVAQDVPTAPKLHLTVISRTAVTFPSVKVTFELLLRGYVRMLASHMRMVAAVKIVADGADYKNRVNLGWQHPDKYYLPRVPVIPVIQMQPDASCFDVANFRNRGDLTSTQITLAVGPTNQPQWNHVFTFTEDEAVLFSDRACLVVEYYAVPVGDKPGLEGDPAQRTFAGYSVLPMNENTRRELLDGVVGMEVAAVLGLDSSPDADASVVALDLKLWSGRPGEQAPQTTRSSSKLSNRQKKQLSVDIRRASQDADGAGEQRVLRRSVTGDESRRGESGAATAPVVPANGRPGVANGSMTAAVLPGGMRPLGGLGSPTGAHTNANRMSGEGESMLGAHGRTSPSGRAGAKIMSPTSQFGGDGLPPLDALGSLLPRPSPRGFVGSAAARADSNSAADEILGNILSPPIGNSGAPPESIPEVPVDERVAVLLRDIDSKQRLINRLLREVDERTEAVRRVGQDVLQLREQNALLDAANADLRRAMSDRDNAIVEAAHGTELEQLPRDDLVRRIVALSGRYQQEAQRCAEYQQRTQQLQNVLIKKNEAEKRWIELEKAHTAQAAYVQKLQESVGKASKYEQTCKQQEKVIVRLEQIIDKHVKDAHRGGTSSTPFNIEMESRKYLQEENARLREQTRQQQFGAIQATEEGGKTDAGGEAVKLRQELESERQRNARLTSEIELAKMSTAGRMDDDERLMLMLRVDKAESRVAALENEMLSNAKTYAKQISDLKVQLSERKANGLRGGASSVSLDDISQNPPSRGPTPTRMQPVRHGATGAQRRPSPQLYPLNQ* # ORIGINAL: g736.t1 original gene structure, not modified by PASA NODE_1028_length_14555_cov_40.0361 AUGUSTUS gene 4817 6177 . + . ID=g736;Name=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS mRNA 4817 6177 . + . ID=g736.t1;Parent=g736;Name=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 4817 5513 . + . ID=g736.t1.exon1;Parent=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 4817 5513 . + 0 ID=cds.g736.t1;Parent=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 5730 5866 . + . ID=g736.t1.exon2;Parent=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 5730 5866 . + 2 ID=cds.g736.t1;Parent=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 6046 6177 . + . ID=g736.t1.exon3;Parent=g736.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 6046 6177 . + 0 ID=cds.g736.t1;Parent=g736.t1 #PROT g736.t1 g736 MPSTGDGAPSADSELRVSVVGATFERADNYFLVVEINLGPRYAGHHESQKGRTDVARNTGAPEFKSASFGFLLPADAEPREAHVVVEAYAISVAAAGAGPDARDQVRLVGRAAYPLQYALQKLVSAGRASAALIIINRLEVDNIDVHVGRVKLDMQLLPSQPNPPPPRPSPNARSIAGNGAANGGGAGNGRMPAGSSVSVESPRGRSSRASSHSGDMSPRRNTQTPAVRISSDVLSEPTSPTGHGSNTGSARGRYDAVTPSSPLKMGFQFPATYHPPTVAEAAPRAALSPKDRSLPVSPTSYMAGKSAGMGLVEVVLVGAC* # PASA_UPDATE: g734.t1, single gene model update, valid-1, status:[pasa:asmbl_94,status:12], valid-1 NODE_1028_length_14555_cov_40.0361 . gene 130 1256 . - . ID=g734;Name=g734.t1 NODE_1028_length_14555_cov_40.0361 . mRNA 130 1256 . - . ID=g734.t1;Parent=g734;Name=g734.t1 NODE_1028_length_14555_cov_40.0361 . five_prime_UTR 1126 1256 . - . ID=g734.t1.utr5p1;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . exon 737 1256 . - . ID=g734.t1.exon1;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . CDS 737 1125 . - 0 ID=cds.g734.t1;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . exon 377 524 . - . ID=g734.t1.exon2;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . CDS 377 524 . - 1 ID=cds.g734.t1;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . exon 130 263 . - . ID=g734.t1.exon3;Parent=g734.t1 NODE_1028_length_14555_cov_40.0361 . CDS 130 263 . - 0 ID=cds.g734.t1;Parent=g734.t1;3_prime_partial=true #PROT g734.t1 g734 MDISVQLSVAPLLESSSPAGVHLNFGDKVIVPTSLLPRILGESDAAARANGESNPVAIELTHRLRRTHISGGILDFTADEGRIVLPAWMAAELQARAGDAIVLRTAQLPKAETCTFEPEDAAFCSVHDYRAVLETAIGSRYVTLTKGSSIAIEHEGHHYRLRVKELQPQDMCAITNTDLEVNIITPGQTEGVQPTSTTARRIVAPNGSPVQGEASDAEYTRHS # ORIGINAL: g735.t1 original gene structure, not modified by PASA NODE_1028_length_14555_cov_40.0361 AUGUSTUS gene 1723 3712 . + . ID=g735;Name=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS mRNA 1723 3712 . + . ID=g735.t1;Parent=g735;Name=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 1723 1908 . + . ID=g735.t1.exon1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 1723 1908 . + 0 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 2037 2140 . + . ID=g735.t1.exon2;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 2037 2140 . + 0 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 2251 2323 . + . ID=g735.t1.exon3;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 2251 2323 . + 1 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 2473 2521 . + . ID=g735.t1.exon4;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 2473 2521 . + 0 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 2643 2784 . + . ID=g735.t1.exon5;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 2643 2784 . + 2 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 3085 3208 . + . ID=g735.t1.exon6;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 3085 3208 . + 1 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 3354 3429 . + . ID=g735.t1.exon7;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 3354 3429 . + 0 ID=cds.g735.t1;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS exon 3525 3712 . + . ID=g735.t1.exon8;Parent=g735.t1 NODE_1028_length_14555_cov_40.0361 AUGUSTUS CDS 3525 3712 . + 2 ID=cds.g735.t1;Parent=g735.t1 #PROT g735.t1 g735 MSKTSRPSATGTSSAAAKKNARRSSIVAATPQARPISRSETKSGKKSKNATSDSPDPEREEQAAADAKENDPSLAWKVVTAAQMDDLYPLAAIESGPKLAEIFGLEDYETNLRTEIKLDFYTSAFFTLMKGVLDAVQEKSFVPSESFAQFKAALVDNLWLSTEPSDGEKWDPYTARKIADYAATGPFQHYRLYQNVATCPMAMPENAPDDADFGGRPLTGTQPIAEEGDGDAGGEINGDDVNTHEDGEQNGEGSESPALFPATVEDAEQVTSALINEPLDGFSADIRNRLKKTESAISMRLQKVEKGLGGDPS* # PASA_UPDATE: g738.t1, single gene model update, valid-1, status:[pasa:asmbl_95,status:12], valid-1 NODE_1028_length_14555_cov_40.0361 . gene 12298 14555 . - . ID=g738;Name=g738.t1 NODE_1028_length_14555_cov_40.0361 . mRNA 12298 14555 . - . ID=g738.t1;Parent=g738;Name=g738.t1 NODE_1028_length_14555_cov_40.0361 . five_prime_UTR 14555 14555 . - . ID=g738.t1.utr5p1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . exon 14332 14555 . - . ID=g738.t1.exon1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 14332 14554 . - 0 ID=cds.g738.t1;Parent=g738.t1;5_prime_partial=true NODE_1028_length_14555_cov_40.0361 . exon 13943 14031 . - . ID=g738.t1.exon2;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 13943 14031 . - 2 ID=cds.g738.t1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . exon 13623 13708 . - . ID=g738.t1.exon3;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 13623 13708 . - 0 ID=cds.g738.t1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . exon 13271 13405 . - . ID=g738.t1.exon4;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 13271 13405 . - 1 ID=cds.g738.t1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . exon 12975 13137 . - . ID=g738.t1.exon5;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 12975 13137 . - 1 ID=cds.g738.t1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . exon 12298 12760 . - . ID=g738.t1.exon6;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . CDS 12491 12760 . - 0 ID=cds.g738.t1;Parent=g738.t1 NODE_1028_length_14555_cov_40.0361 . three_prime_UTR 12298 12490 . - . ID=g738.t1.utr3p1;Parent=g738.t1 #PROT g738.t1 g738 PAPPAPAPAQAQAQPQAQPQAQAQAQPQAQAQGSRLFASPLAKRLAAEKGISLADVSPSGERIVKADVEAFAGKAPAAAPTAPAAPAPIVGTEFTEIPHSNIRKITAARLLEAKRNIPHYYLTVDVKLDGLLKLRQELNGASDGVKLSVNDLIIKASAKALNKVPAVNSSWTDSAIRQYNSVDISVAVSTDSGLITPIVRGADKKGLADISSTIKELAERAKANKLKPHEFQGGTFTISNLGMYGIKQFAAIINPPQSCILAVGAGEKRVVPDDKQATGMGVATVATVTLSCDHRVVDGAVGAQWLQAFKGFVENPITMLL* # PASA_UPDATE: g2366.t1, single gene model update, valid-1, status:[pasa:asmbl_6658,status:12], valid-1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . gene 346 1635 . - . ID=g2366;Name=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . mRNA 346 1635 . - . ID=g2366.t1;Parent=g2366;Name=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . exon 1622 1635 . - . ID=g2366.t1.exon1;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . CDS 1622 1635 . - 0 ID=cds.g2366.t1;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . exon 1036 1282 . - . ID=g2366.t1.exon2;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . CDS 1036 1282 . - 1 ID=cds.g2366.t1;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . exon 346 660 . - . ID=g2366.t1.exon3;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . CDS 451 660 . - 0 ID=cds.g2366.t1;Parent=g2366.t1 NODE_3869_length_2591_cov_364.602_potentialcontaminant . three_prime_UTR 346 450 . - . ID=g2366.t1.utr3p1;Parent=g2366.t1 #PROT g2366.t1 g2366 MSVLMSFSAIAAKSSEESREIYRFSDPQPTAAGRQQPRSVGGKTSSASKPVVEGAVHNSRTPASEQLRTEAELAYALDWLLNFISNEDPSEEPPAQLSQKLVDSVAKKVGLQGFTSKHTVKRAREVIDFVVDEKSILKMTVDRMENGELRDVRYHK* # ORIGINAL: g9627.t1 original gene structure, not modified by PASA NODE_823_length_17293_cov_41.4906 AUGUSTUS gene 7122 8633 . - . ID=g9627;Name=g9627.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS mRNA 7122 8633 . - . ID=g9627.t1;Parent=g9627;Name=g9627.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS exon 7122 8633 . - . ID=g9627.t1.exon1;Parent=g9627.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS CDS 7122 8633 . - 0 ID=cds.g9627.t1;Parent=g9627.t1 #PROT g9627.t1 g9627 MGNRDADADWLKSLLPIQLSVDACNGAPCLINSAVGGIASRRMCRVLSPVPHLPIVSAAAPTPTESIPGNALTVCAHDCDEGTDWDDTAGTSPIVTTTITLGPFSFTSTPAGSTVNSARRGSHESDTSYASYLACTTPRTADDGHAGFMTGLAHPGMSPAHHQYTVMLEPPAVDEEALSDIARAHALPGNIDELSRLLSSTQPFESPSTANIAAWMHYASATSAHGDDYSSFGACGGISSVMTLAPYPSTPLVPDILIPGGADTTYYDDGGAMQSQQPTDWGTSSPESEYGAHISATALLGTNDANELPFQSTQSGDMDTSRVDFTDRQTQFYPMHSVNSGAVNSCGHVCHTNAHYGHCETGTDAVCQMGTVGGSTSGLHINININNNNNNNNNNNNNNNNNNTESATTCNPLTWVIEWGTTNPPTPSLNAEQSLHADRIQDTAIRKAAEAWLSYKGTAVAQAAPRRRTKMAKRAGDVEGSRRRSSIGRMDAVGGGAVHIGGL* # PASA_UPDATE: g9626.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9555,status:3], valid-1 # PASA_UPDATE: g9626.t1, single gene model update, valid-1, status:[pasa:asmbl_9554,status:3], valid-1 NODE_823_length_17293_cov_41.4906 . gene 2348 6979 . + . ID=g9626;Name=g9626.t1 NODE_823_length_17293_cov_41.4906 . mRNA 2348 6979 . + . ID=g9626.t1.1.5b6be70c;Parent=g9626;Name=g9626.t1 NODE_823_length_17293_cov_41.4906 . five_prime_UTR 2348 2622 . + . ID=g9626.t1.1.5b6be70c.utr5p1;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 2348 3187 . + . ID=g9626.t1.1.5b6be70c.exon1;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 2623 3187 . + 0 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 3419 3543 . + . ID=g9626.t1.1.5b6be70c.exon2;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 3419 3543 . + 2 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 3789 4238 . + . ID=g9626.t1.1.5b6be70c.exon3;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 3789 4238 . + 0 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 4473 4656 . + . ID=g9626.t1.1.5b6be70c.exon4;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 4473 4656 . + 0 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 4937 5087 . + . ID=g9626.t1.1.5b6be70c.exon5;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 4937 5087 . + 2 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 5251 5361 . + . ID=g9626.t1.1.5b6be70c.exon6;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 5251 5361 . + 1 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 5571 5667 . + . ID=g9626.t1.1.5b6be70c.exon7;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 5571 5667 . + 1 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 5972 6047 . + . ID=g9626.t1.1.5b6be70c.exon8;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 5972 6047 . + 0 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 6305 6474 . + . ID=g9626.t1.1.5b6be70c.exon9;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . CDS 6305 6423 . + 2 ID=cds.g9626.t1.1.5b6be70c;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . exon 6719 6979 . + . ID=g9626.t1.1.5b6be70c.exon10;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . three_prime_UTR 6424 6474 . + . ID=g9626.t1.1.5b6be70c.utr3p1;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . three_prime_UTR 6719 6979 . + . ID=g9626.t1.1.5b6be70c.utr3p2;Parent=g9626.t1.1.5b6be70c NODE_823_length_17293_cov_41.4906 . mRNA 2348 6979 . + . ID=g9626.t1;Parent=g9626;Name=g9626.t1 NODE_823_length_17293_cov_41.4906 . five_prime_UTR 2348 2622 . + . ID=g9626.t1.utr5p1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 2348 3187 . + . ID=g9626.t1.exon1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 2623 3187 . + 0 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 3419 3543 . + . ID=g9626.t1.exon2;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 3419 3543 . + 2 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 3789 4238 . + . ID=g9626.t1.exon3;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 3789 4238 . + 0 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 4473 4656 . + . ID=g9626.t1.exon4;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 4473 4656 . + 0 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 4937 5087 . + . ID=g9626.t1.exon5;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 4937 5087 . + 2 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 5251 5361 . + . ID=g9626.t1.exon6;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 5251 5361 . + 1 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 5571 5667 . + . ID=g9626.t1.exon7;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 5571 5667 . + 1 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 5895 6047 . + . ID=g9626.t1.exon8;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 5895 6047 . + 0 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 6305 6474 . + . ID=g9626.t1.exon9;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 6305 6474 . + 0 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . exon 6719 6979 . + . ID=g9626.t1.exon10;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . CDS 6719 6860 . + 1 ID=cds.g9626.t1;Parent=g9626.t1 NODE_823_length_17293_cov_41.4906 . three_prime_UTR 6861 6979 . + . ID=g9626.t1.utr3p1;Parent=g9626.t1 #PROT g9626.t1.1.5b6be70c g9626 MDLREPSPSPVQVLDADAAVQAPVLVGIPAVDASVVVESTSPADLDAQSSAALADSITEHSPETPREDSDNGHEVRNAVQVDVAGDGEPVGPLTDMNSAPLEPPADTKPARPSLDYKQMVESIPTTSLNSVAGEFYPAHVPGRAVMAETGEGDAALAHSDFAPPSSTTSRPPSALESQSTTSAGSADAEIVRYTVQQNDTVVSIAVRFGITVWELCTFNRISSKVVFPGDVIRIPRPGMVAAKRTGSRTDLFASASASASASTATLDHLDGTVSADAHPIEPVPEEGSPGALSAANGALSHSSPDLTLPTAAGDVEEKSVRGRTGSAESDAATAAQSRTASAGPLGFSTLRRRTSIDVVDPPVLSDGTFQYHVKYITEGKGVVAGFLLMSPERFGFLPSEDDPLVKELGVEDYELDGPIGAVCNCSVHESLARIRRANRESDEEGTADGWALVDAESVPPDAQAALPMYLKVGVVGPGGMPKDHVFAVSRRKIDTLYGSLLQFMSDAEFMHGAQLLPLVIGAKAKTPKKRSFVDDLMGEDHPVPPILMQPSKLIDPTDMLKPADILPQHGQAQRAVRAGHVRHHGSRIWGVCYRAVANVRDVLRQRRVLSVQRQADVCGVPLDPR* #PROT g9626.t1 g9626 MDLREPSPSPVQVLDADAAVQAPVLVGIPAVDASVVVESTSPADLDAQSSAALADSITEHSPETPREDSDNGHEVRNAVQVDVAGDGEPVGPLTDMNSAPLEPPADTKPARPSLDYKQMVESIPTTSLNSVAGEFYPAHVPGRAVMAETGEGDAALAHSDFAPPSSTTSRPPSALESQSTTSAGSADAEIVRYTVQQNDTVVSIAVRFGITVWELCTFNRISSKVVFPGDVIRIPRPGMVAAKRTGSRTDLFASASASASASTATLDHLDGTVSADAHPIEPVPEEGSPGALSAANGALSHSSPDLTLPTAAGDVEEKSVRGRTGSAESDAATAAQSRTASAGPLGFSTLRRRTSIDVVDPPVLSDGTFQYHVKYITEGKGVVAGFLLMSPERFGFLPSEDDPLVKELGVEDYELDGPIGAVCNCSVHESLARIRRANRESDEEGTADGWALVDAESVPPDAQAALPMYLKVGVVGPGGMPKDHVFAVSRRKIDTLYGSLLQFMSDAEFMHGAQLLPLVIGAKAKTPKKRSFVDDLMGEDHPVPPILMQPSKLIDPTDMLKIISYMPKRHQRADWNLIYSTYVHGISLRTFYRNMDKHNGPSVLVMSDTMGHVFGAFVTEPWRMCETFYGSGECFLFSVKPTFAAYPWTHDNDFFMMGRLDCISIGGGGGQFGIWLDSDFNHGSSHPCVTFRNPTLSHAPDFHCVVMEAWGFESW* # PASA_UPDATE: g9625.t1, single gene model update, valid-1, status:[pasa:asmbl_9557,status:12], valid-1 NODE_823_length_17293_cov_41.4906 . gene 122 1795 . - . ID=g9625;Name=g9625.t1 NODE_823_length_17293_cov_41.4906 . mRNA 122 1795 . - . ID=g9625.t1;Parent=g9625;Name=g9625.t1 NODE_823_length_17293_cov_41.4906 . five_prime_UTR 1563 1795 . - . ID=g9625.t1.utr5p1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . exon 1491 1795 . - . ID=g9625.t1.exon1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . CDS 1491 1562 . - 0 ID=cds.g9625.t1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . exon 1131 1218 . - . ID=g9625.t1.exon2;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . CDS 1131 1218 . - 0 ID=cds.g9625.t1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . exon 902 1015 . - . ID=g9625.t1.exon3;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . CDS 902 1015 . - 2 ID=cds.g9625.t1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . exon 430 664 . - . ID=g9625.t1.exon4;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . CDS 430 664 . - 2 ID=cds.g9625.t1;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . exon 122 254 . - . ID=g9625.t1.exon5;Parent=g9625.t1 NODE_823_length_17293_cov_41.4906 . CDS 122 254 . - 1 ID=cds.g9625.t1;Parent=g9625.t1;3_prime_partial=true #PROT g9625.t1 g9625 MVKYAQYLDSHAVPDWRQRYLDYRSLKHRIHEVLIEKSPPKTRRRGSFSFIVRDYDGVPATRTSTLSHDNIDLSFTALLDLELAKINNFFHVKLEQSKVRLDSLVRQLDGVPAFNPRMGLGDDLEVEIIDETAPLLTEEARDAMNRSADGSSLTGSINSRRSSRPPPLRRLRSWLSDVRETREINNEPENYVARTLKLEFCEFYSMVESLRSYQ # PASA_UPDATE: g9629.t1, single gene model update, valid-1, status:[pasa:asmbl_9558,status:12], valid-1 NODE_823_length_17293_cov_41.4906 . gene 13253 15505 . - . ID=g9629;Name=g9629.t1 NODE_823_length_17293_cov_41.4906 . mRNA 13253 15505 . - . ID=g9629.t1;Parent=g9629;Name=g9629.t1 NODE_823_length_17293_cov_41.4906 . exon 13253 15505 . - . ID=g9629.t1.exon1;Parent=g9629.t1 NODE_823_length_17293_cov_41.4906 . CDS 13253 15505 . - 0 ID=cds.g9629.t1;Parent=g9629.t1 #PROT g9629.t1 g9629 MPSAVSAQQQEESTLADDLPRGRMPVVLLPTRDDTPGAFGQVERYARATDCQLTGLESVASHTHFNSLSRRCLITGTGLNEMNSAFHVAEHYACALPVALPHLSVIRIPTAAPTPHSVASVAMQQWTAQSPLRYIPSPTPSLPGGRDEILTGVEYAYGVHAHNYKYADPFRTDAAVEVGNEGVPLCPHKRRTVDATFLLPHAPPLEDFLSVGEMASAVIDANDRHISTHGAATDHWQGYQFERTCTQSSKYMSFAHTESPDDDEFYVDARKQAAPLTTTPLSRASSISELPCSAAYLPGPVMLDGEVRPHTETTPTRQVSGEAPGARWQWHDESHVFAEHIRSECVVTNVCRSTQKAPLSSESAFIASSQAEIHRDDGAQMPSGAPQTGTQLHLADKEDAWGEEPLTDESEMDDEENAVEFNDEKEREVQFPFDPLMIEMGTFAGGSSAQWLSSLSFTPPCAVVAAVESDTARRIDFQPKAQAHYANKTSDWSVNQSSPRRTQRPKTIARDGHPNANFDTATHLAHEVRAAPSYEITTDNSNMNAQQCYVIGAATAWLQTRGTTAVVSRASATASLSQTDLPTDATPAIMDSTCSTHEKIQEGDIPVRSTAHERRKRKRRSAVGHGVCHEDVMMNCACRLSAPTGDCAEYQGGTTTARVLFSNTDHGSKCPYAPPNTTQVTKSEGSTLRVAASRRARTTSDRRARDKQRRTAASASELRTSTATEPDDAMARSRHHSVIQKMIQSLENTC* # ORIGINAL: g9628.t1 original gene structure, not modified by PASA NODE_823_length_17293_cov_41.4906 AUGUSTUS gene 10254 11858 . - . ID=g9628;Name=g9628.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS mRNA 10254 11858 . - . ID=g9628.t1;Parent=g9628;Name=g9628.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS exon 10254 11858 . - . ID=g9628.t1.exon1;Parent=g9628.t1 NODE_823_length_17293_cov_41.4906 AUGUSTUS CDS 10254 11858 . - 0 ID=cds.g9628.t1;Parent=g9628.t1 #PROT g9628.t1 g9628 MEFAMSTMQPLQVHDQVNSREAFAIALTQGWAHAGIVNDDRHESVENDSCVPHCTLSILGLPSQSSAAPNPRLNTPMHTLCDHRLEMEHHGVSATSDGSAECEPLIKTAPITIGPFTFDPRRGALSNGAAPAYWSAHEAYNAERANATISCWMQMAMQPICILPRDCGVDYVPSHTDKVGGGAISPFTPPATPRVWKSQSVDNQEKCDGVIVGSFNAHNIRALRSASASLWDGTVPNAASDGNEDQHDLPAFTHNSYWSAFARDISASSHGAGICGSRQPSPRAVPVCIAEIPPSPSATMLCDDHLSHSFNSDAHSEQWSADTRDYGSAEEIDGTFRILHTRLSISFEESVHECNVNAARQMQPTAGSVHAESTQAHATGETIPDIVNTSSAKDALRRSLVSKDIDHAYTYVQAAAVPVASNQRQLEGSATCNTSFATNTMAIGITAIGSPLAEAADPAAPGTVYMNRSDNPVIVGALAWLHKYGMKAQPKTPKAAKPTMPTDRPPSGGLESIRPTPIAKRKPAGRRARPVYKD* # ORIGINAL: g81.t1 original gene structure, not modified by PASA NODE_4689_length_1326_cov_35.4229 AUGUSTUS gene 173 1224 . - . ID=g81;Name=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS mRNA 173 1224 . - . ID=g81.t1;Parent=g81;Name=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS exon 991 1224 . - . ID=g81.t1.exon1;Parent=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS CDS 991 1224 . - 0 ID=cds.g81.t1;Parent=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS exon 538 834 . - . ID=g81.t1.exon2;Parent=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS CDS 538 834 . - 0 ID=cds.g81.t1;Parent=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS exon 173 291 . - . ID=g81.t1.exon3;Parent=g81.t1 NODE_4689_length_1326_cov_35.4229 AUGUSTUS CDS 173 291 . - 0 ID=cds.g81.t1;Parent=g81.t1 #PROT g81.t1 g81 MLSLPLCSTELYRLASASVRHGFELLDASKLALVSNTSAYRSFLCLAGALARVSPTDESLADNLARYCFFMNVRSTLLLHAILALGGPQTHAQWQVLHSIARYQVCGFVASVELIDRVILRAPMPPSLSALSNAADTSAALAASGAEDVVMSMRLKEPVSGMALALADGTAGGPLFQVYRPSTVAHQLMRAGTEFCNEQIVIMMESNKILLPAYFK # ORIGINAL: g11831.t1 original gene structure, not modified by PASA NODE_4133_length_2139_cov_44.6391 AUGUSTUS gene 248 1436 . + . ID=g11831;Name=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS mRNA 248 1436 . + . ID=g11831.t1;Parent=g11831;Name=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS exon 248 303 . + . ID=g11831.t1.exon1;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS CDS 248 303 . + 2 ID=cds.g11831.t1;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS exon 501 614 . + . ID=g11831.t1.exon2;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS CDS 501 614 . + 0 ID=cds.g11831.t1;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS exon 885 1057 . + . ID=g11831.t1.exon3;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS CDS 885 1057 . + 0 ID=cds.g11831.t1;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS exon 1382 1436 . + . ID=g11831.t1.exon4;Parent=g11831.t1 NODE_4133_length_2139_cov_44.6391 AUGUSTUS CDS 1382 1436 . + 1 ID=cds.g11831.t1;Parent=g11831.t1 #PROT g11831.t1 g11831 VLAPRLTPLSAVRIVLSDRSSALSASCPRSTLSLKSHTTFFAVFSVCGRRAMGSRQRCPSSPRTRCSWLTSARSRPAAASLPSRPILPRLCSRSPCARRSARRLRSVGVSRSTGGLSAGVTFAAAPSSRSMR # ORIGINAL: g1286.t1 original gene structure, not modified by PASA NODE_2694_length_5431_cov_38.6501 AUGUSTUS gene 51 335 . - . ID=g1286;Name=g1286.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS mRNA 51 335 . - . ID=g1286.t1;Parent=g1286;Name=g1286.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS exon 51 335 . - . ID=g1286.t1.exon1;Parent=g1286.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS CDS 51 335 . - 0 ID=cds.g1286.t1;Parent=g1286.t1 #PROT g1286.t1 g1286 MLSAQMQSWLLRAGISGYPKLPNASLSAVSGSSGHTSAKTSAAVSSKKGTPSASLVGGAIVATTAATATELDGKQCTRDVFTLLNLVGEGLTVDQ # ORIGINAL: g1287.t1 original gene structure, not modified by PASA NODE_2694_length_5431_cov_38.6501 AUGUSTUS gene 2332 5222 . - . ID=g1287;Name=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS mRNA 2332 5222 . - . ID=g1287.t1;Parent=g1287;Name=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS exon 3072 5222 . - . ID=g1287.t1.exon1;Parent=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS CDS 3072 5222 . - 0 ID=cds.g1287.t1;Parent=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS exon 2736 2803 . - . ID=g1287.t1.exon2;Parent=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS CDS 2736 2803 . - 0 ID=cds.g1287.t1;Parent=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS exon 2332 2458 . - . ID=g1287.t1.exon3;Parent=g1287.t1 NODE_2694_length_5431_cov_38.6501 AUGUSTUS CDS 2332 2458 . - 1 ID=cds.g1287.t1;Parent=g1287.t1 #PROT g1287.t1 g1287 EDEATHSVGVCFADASTGRFELCSFTDDAARTQLETLIVQIKPKEIVVERGCLSAVASRIVKNAADCPIVNQLASRVEFWDAQTTLDELDFAGYFSPDGMTLPLSPQSPPADAAPKRKGELPEGLRAMAGDAMAISALGGLICYLRKLKVDRQLVPQGRFSRYDPMGSGSTLMLDGHTLTNLEVLENNTDRTARGSVLALVNHCATAAGRRAMRRWLCHPLRRVDEIVERQGAVGEIASNGDLRDALRKALLAIPDIERLASRIHAGSCRLADFLTCIDGCNAVLAMASSLRNAHEVSSSRLVRLLTVGDLMPDLEPHIRDVESAFDVNKARADGLVVPNPGQSPDYDRAAAEVSRLEDLLAEHLDEVRREVRDRHVVYKDVGNEKYQLEIPVATKVPASFELKSQTKAVRRYWTPKIRQLVGPLAEARETLAATGRSEFSRLLQRFDRHLPAWMQAAGCLSELDCLRALAVAGDAMGEPSCVPQFVQSDAAGSADRAPVLELRGMRHPCVASLSANFVPNDTVLGGNNHPGALILTGPNMGGKSTLLRQVCVAVILAQLGCKVPADSFVLSPVDRIFTRLGANDNIMAGQSTFMVELAEASAMLRHASRNSLVIMDELGRGTSTHDGQAIAHAVMSHIADDIRCRAMFSTHYHALTDAFEREAASQEGPGRVGLGHMACSVEPNGRDVVFLYTLADGACPKSYGMNVAAMAGLPEEVISCAERMASQFEEVSRAASSKRLLNPARLAQFKSLRSLLRATTGTQTDAEAVKRLVQSLSVVN* # PASA_UPDATE: g14153.t1, single gene model update, valid-1, status:[pasa:asmbl_5408,status:3], valid-1 NODE_3008_length_4542_cov_37.3022 . gene 1919 3781 . - . ID=g14153;Name=g14153.t1 NODE_3008_length_4542_cov_37.3022 . mRNA 1919 3781 . - . ID=g14153.t1;Parent=g14153;Name=g14153.t1 NODE_3008_length_4542_cov_37.3022 . five_prime_UTR 3617 3781 . - . ID=g14153.t1.utr5p1;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . exon 2990 3781 . - . ID=g14153.t1.exon1;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . CDS 2990 3616 . - 0 ID=cds.g14153.t1;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . exon 2340 2833 . - . ID=g14153.t1.exon2;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . CDS 2340 2833 . - 0 ID=cds.g14153.t1;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . exon 1919 2102 . - . ID=g14153.t1.exon3;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . CDS 1931 2102 . - 1 ID=cds.g14153.t1;Parent=g14153.t1 NODE_3008_length_4542_cov_37.3022 . three_prime_UTR 1919 1930 . - . ID=g14153.t1.utr3p1;Parent=g14153.t1 #PROT g14153.t1 g14153 MRLPAQHSPAAAARISSMHRHACLLAVVAYAMCLSFAGATISHSPHMHTVTRGNNAELNPGCGARCDNLAGCVVVVNSTHTNPYTNDTDVLTYIWSVIGAPIVHEDFYASADAVLVDIDWDALLAGGDARYGSITRGPADMSASIVFNSVIEFSDEDDSAQYSPATSGNTLLATSSLAARQWNCTLSVSPSGVSPVLVATTSDGNFTLTLSIPEASRRSSNPPRRLLQINSTLITVETKSFTDGDKAKVAVNLTLIGANVPGILADVSAAIDDEYTPSIFQNVKVTLPHAPGAPSGIQNAYAQWKPCAYTSPSRKSADIIPAEFVESDFATAPSLSITADGGGSVWGQGVYGRVMILAFGAPEDKAYSPDYLVWELSLGYGFTAKDELSALVIAIIACCVGIPFVVITVGLAYSFVKSRLGRTHSYTPIQ* # ORIGINAL: g14152.t1 original gene structure, not modified by PASA NODE_3008_length_4542_cov_37.3022 AUGUSTUS gene 352 1478 . + . ID=g14152;Name=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS mRNA 352 1478 . + . ID=g14152.t1;Parent=g14152;Name=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS exon 352 501 . + . ID=g14152.t1.exon1;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS CDS 352 501 . + 0 ID=cds.g14152.t1;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS exon 697 800 . + . ID=g14152.t1.exon2;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS CDS 697 800 . + 0 ID=cds.g14152.t1;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS exon 960 1052 . + . ID=g14152.t1.exon3;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS CDS 960 1052 . + 1 ID=cds.g14152.t1;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS exon 1304 1478 . + . ID=g14152.t1.exon4;Parent=g14152.t1 NODE_3008_length_4542_cov_37.3022 AUGUSTUS CDS 1304 1478 . + 1 ID=cds.g14152.t1;Parent=g14152.t1 #PROT g14152.t1 g14152 MNIWAVDLKLNYSDEYALSSLVCFVTGGRFDPNTCHFVLQSEQEAHDRIRRAHERKDSYVEELDQRFAILGSRLHHANLCIVHYSVFFKLCRAKGIAFDPQQRTGTVFTLLDSFTRGMLGMACVGRTSKGAATMFKNDIGAIHRQLAYSVLEGHSNFVDVDTALQHFILGLNV* # ORIGINAL: g10866.t1 original gene structure, not modified by PASA NODE_4158_length_2098_cov_40.611 AUGUSTUS gene 215 1685 . + . ID=g10866;Name=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS mRNA 215 1685 . + . ID=g10866.t1;Parent=g10866;Name=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS exon 215 293 . + . ID=g10866.t1.exon1;Parent=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS CDS 215 293 . + 2 ID=cds.g10866.t1;Parent=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS exon 608 1151 . + . ID=g10866.t1.exon2;Parent=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS CDS 608 1151 . + 1 ID=cds.g10866.t1;Parent=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS exon 1509 1685 . + . ID=g10866.t1.exon3;Parent=g10866.t1 NODE_4158_length_2098_cov_40.611 AUGUSTUS CDS 1509 1685 . + 0 ID=cds.g10866.t1;Parent=g10866.t1 #PROT g10866.t1 g10866 NIASYDGCSDKCRVEDNWACDGQNPSVCWVYRGDGYCDLVENEEELSPFDCDYWPPAGSRDQWAVNGTSPFKDSTSRMYTPAAATLKPVVKDFCANYDVAGYAVSLQEVDGDPAYLDVAFATPDFASEVHVYVQLGSTYTNNAYIALRAVDGKWHYMTSDKMELDCSKNPHIFRPRFPPGVAPPKISALRLFLEAPDQIDVSIRGIIMRSYAVWHRYECADGEHYNKYGECVPIAFVNEDCPANGLGGVLRQQCFIKAKVDKGVC* # ORIGINAL: g12916.t1 original gene structure, not modified by PASA NODE_560_length_21175_cov_42.7707 AUGUSTUS gene 7088 10768 . - . ID=g12916;Name=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS mRNA 7088 10768 . - . ID=g12916.t1;Parent=g12916;Name=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 10100 10768 . - . ID=g12916.t1.exon1;Parent=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 10100 10768 . - 0 ID=cds.g12916.t1;Parent=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 7532 9998 . - . ID=g12916.t1.exon2;Parent=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 7532 9998 . - 0 ID=cds.g12916.t1;Parent=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 7088 7383 . - . ID=g12916.t1.exon3;Parent=g12916.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 7088 7383 . - 2 ID=cds.g12916.t1;Parent=g12916.t1 #PROT g12916.t1 g12916 MSEQNDVNDAENAAQDGQPDIMYHDEGKARTPPKTPADALDGNSTEAGGSASGDANEDATTEDTNRVASAGNGQSAGDHPSASPVAGAPPSAPVPDETGDVAGVSSMVEQMDIGDGDGTDHDERTHFEGRYPSPPASPGPSVSNALALSWVFGFNKNIINGVHTLTDETPESTHQRVLFYVSAHTGILWDIDENRQKLLQGHCNAISATCVSDDKRWIATADKGAESMVIIWDARSGTPIRTLFEPHREGVIAMAMSPDARFLATVGAACPQTLCIWDWTSDDKDMPIHCYPLGDYYEEHLFTNVRFDSSDARNIVVTSALKVTFIHWNRSRLEAVTPQLAARDFNHIVGSYTQSAFTPGHALAITGTVDGDLIVWNRSHESADTKTTLKNGTRSRKAQSAHSSARPRTAGVDASANKAGGDGTEQVARVGPAKVTTDGSGASFAVKATKIVRLHESSINVLVCTPSRVITGGSDGFVRFYDHHFRIADWFERFESGPITSLSFARSGTPRSASPGVGMDDGNEFGMDSLAYKTTGDLSSAQDLQKSGLIQGDEDDAPTPEFLVGTASATVILVEPRNAESTMYEIDADSWKAGRVLLCGQEGELHALAAHPSLPRFAMCGYGGQLHLWDYAERVRIAGRSFESKSLLVQCVEFSPDGKMLAVGFTNGVVKIIDAATLSDLPSRSSFRISRDSLTRLCFSADSSQLATADADFCVTLYGLLPDDTRRDPEGDYGEVPELVWTYVGKYRAHTATITGIMFGISGETGLARLVSLGADRNVVEYDLSTSSTTEGLRVRSVDRIEQSSTPTAMVWYPPVTKEGFILVANDRLKLKLFNATTLMCRQTVLGPTFGGAPARLSMLPCARGQEEIAPRFLAYATTDRIIGLVMVPLEGHPHTSMAVIAHPGEVTALACTYDGSHVITAGGKDGTVNFWRVNIDVLKAASRLGGEGMDPYLSMVEGGRNGEFFKELEDYFYYAQVRNLGEDTMAPREVTSRVPVGQVPSIMRALGFFPSEQQVEDIVNEVKFSSYVDTQEYVRDVNLEQLVKLYVNHRPVFGISSDELEEAFAILASSADPSKGDNGGSVSRARFLELIQSCGESMPELELADCLSALLGDGQLEELLPEEITPETFARDILGFVPYEPR* # ORIGINAL: g12915.t1 original gene structure, not modified by PASA NODE_560_length_21175_cov_42.7707 AUGUSTUS gene 124 5931 . - . ID=g12915;Name=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS mRNA 124 5931 . - . ID=g12915.t1;Parent=g12915;Name=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 4769 5931 . - . ID=g12915.t1.exon1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 4769 5931 . - 0 ID=cds.g12915.t1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 3094 4590 . - . ID=g12915.t1.exon2;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 3094 4590 . - 1 ID=cds.g12915.t1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 2107 2833 . - . ID=g12915.t1.exon3;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 2107 2833 . - 1 ID=cds.g12915.t1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 966 1856 . - . ID=g12915.t1.exon4;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 966 1856 . - 0 ID=cds.g12915.t1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 609 746 . - . ID=g12915.t1.exon5;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 609 746 . - 0 ID=cds.g12915.t1;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 124 237 . - . ID=g12915.t1.exon6;Parent=g12915.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 124 237 . - 0 ID=cds.g12915.t1;Parent=g12915.t1 #PROT g12915.t1 g12915 MQVASRRSIEGYSGSGGRRESSAGRREGSAGRRDSALRTPSSVAISIHPSVSVPSQLSRQHTCLKEEPFGGDPRLIPAPPTPSPAPVKTGIRRIPRQPTQPLVSVAVPTPPPKKRPQRAGSAHQHKHSDQGVRAQPSAQFAGDEDTLALPGDSWEGSSGVAARIENSKLDCPCTCANCVGSNVSAAYATATSLLRFEWLCARRPSFEDHINVFMSSRAFPRRLLFDEDACGFLDRKSPATVGGRPVYVTAEINGWFETQRLPFFSVSDELALYMAADCIASIAEAVVAAAYHRHDRKVGEELRIDPHCAESVEENADTSLVKDGTLVSGPLLVKGALAITNTRDGAMRFRRFLQGKMGERDLNFWMEAEKYRQTPDSLNDFDTRRRQVQFRSNLLNYYLADDGPMALAPGSRDRAVCRACEIGIDLMLLEIQSIAARNLALYWLPQFAASPFVDRKTERTAPTGVVPATDATASKTTTTTITGAEATKGGKEAAGAAEAKDKARPQLVKRSKASEMRNARPQSARRQGAQAAGAAAVASSSGGNDDGEAPGRHGARVRSARGNRKIAGAALAIAAHDPFVRVGGAEWERVGSAVGIRGRGPTECLAGGCMEEEMFARIEWDDLCMSILALIDEAEQKQCARILDALRNDSAAGKPFAAYLAAGGHLQQDGTVSGGSSASLRSGRSSAAGLDSRGGAFYTGRRPPPRNVALHCIGFWLDVLLYLARVEQMSVAEVQDQTKSLFNRYLAEGSCLSVEYSGPRGADGLRMLFAMPPMARFNVALSHCLYILGEAYQRYRVSDHAAWESAVKRHTKLTEERMVAMGMSVEDPNNRKPYQPTFQRKSLAQWDTITAITPGVTLLKGTGKLSSFQRSMMFNEALASARAEHGGRGVKPSDAFGRLRLFHALRVQEDIDRERFRQKKRMKELAEMIQPSTGRRSSFFSPSSGTKRERKSRRGTLSELGKLMRDPLKAMMSGRSTPKPLSRSGSVVDDILGQTPDMQDEMVPTLLKTILDDPREVVRFRAHLEAVGDTQTSDELGLWFELERMRRGLLKEKVKEEDEDDEDTSDKEENADVKFDAGLQDLARDIYKTYLTKDAPRLVDLRTVDNKLALEIASLKDGCPSPALLGALQGAAFVRLTQKYAAFVSSGEYMVRAAEESVRDIVDDMQLQETIRGRVRVAMRRRSFALLQLQQSQSQTPMPDIGPATAPPTIGGSPFDGLITMDTPSAPGSAASGQLTEAERAAAAASGGVRPPSTSSIGAAPTSTTPLLRKPSGILAATTAAAQAAVSTGPSSVAPLTGFQAVEFDIFSEALLEDKEGEELAEKGQATDGVHHFGLGELPPLTETLGEVDANDAEVAMTNAARDLDNGAVAASSGAPPGLPPPPAMGMPGVAASSTPAHGAELTPALTGQPAVLSALGEADRKIRNKVLWREAAVDIISLRRCIMNSVTYEKMRAFLRHKGGNLENDLLFWIEVERCKAMGSSEDDSAMAQIKINTIIDCFLDSAVPPACQ # PASA_UPDATE: g12917.t1, single gene model update, valid-1, status:[pasa:asmbl_8194,status:12], valid-1 NODE_560_length_21175_cov_42.7707 . gene 11848 13905 . - . ID=g12917;Name=g12917.t1 NODE_560_length_21175_cov_42.7707 . mRNA 11848 13905 . - . ID=g12917.t1;Parent=g12917;Name=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 13689 13905 . - . ID=g12917.t1.exon1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 13689 13905 . - 0 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 13441 13482 . - . ID=g12917.t1.exon2;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 13441 13482 . - 2 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 13144 13292 . - . ID=g12917.t1.exon3;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 13144 13292 . - 2 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 12834 12928 . - . ID=g12917.t1.exon4;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 12834 12928 . - 0 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 12468 12667 . - . ID=g12917.t1.exon5;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 12468 12667 . - 1 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . exon 11848 12267 . - . ID=g12917.t1.exon6;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . CDS 12023 12267 . - 2 ID=cds.g12917.t1;Parent=g12917.t1 NODE_560_length_21175_cov_42.7707 . three_prime_UTR 11848 12022 . - . ID=g12917.t1.utr3p1;Parent=g12917.t1 #PROT g12917.t1 g12917 MIRQIVLAGAASARFVCARASSARLSTAVHTPALSSPSRALFNISQRYYATERDLVLPGDEGKTPKASMPMGLKRFYKNVHVQTGEDGRHSILLDSRVLKTPAKNLLSVVNRDLAVAIAAEWEARASNEKMDELHLTMLANTAIDRGTSNKADRIASLLNYIVTDTLVVREHPETPLGEMQVEQWDPLVRWFEKDVLGGHTLSVSHELLDVQQSEQVLERLRDMLVALDTHVFVGVEEAVQVAKSFIVGMAVVRRQLTPHQGSYLARLETEFQIARWGEVEWGHTIDSHETQTRLAAAALYARLSERDDAHPPKK* # ORIGINAL: g12918.t1 original gene structure, not modified by PASA NODE_560_length_21175_cov_42.7707 AUGUSTUS gene 14657 15691 . - . ID=g12918;Name=g12918.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS mRNA 14657 15691 . - . ID=g12918.t1;Parent=g12918;Name=g12918.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 14657 15691 . - . ID=g12918.t1.exon1;Parent=g12918.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 14657 15691 . - 0 ID=cds.g12918.t1;Parent=g12918.t1 #PROT g12918.t1 g12918 MIAIFLSFVVWYSSATLSTVASSAALANTGLRQCLWVDVTCVFLLAGCVPVLFSCAASRHVRERLIHALASADLKQAAFFHLVGTLATCASFATASASLTQVVKASEPVFTVVLSRLLGRAVPLNGRQCLSIALISVGLFIATYAGAGTSVAGVLTSCLSALCFPLRNISSARVRSDRVSPSEKYAAASVLSFFPALALVVMRHVSMTLSGIDTHAAPPTDPDGLIAIGDSLASTAITGPLVAAVLTAAVSHVCYNTASYIVLDAAGPVSHSIANIFKRFSTIIWAHAVFGEPFSPAEWGGLVIAASGFSLYARTFVLIRRVALPSRNVVVPTSDAGHASIAEG* # ORIGINAL: g12919.t1 original gene structure, not modified by PASA NODE_560_length_21175_cov_42.7707 AUGUSTUS gene 16538 19729 . + . ID=g12919;Name=g12919.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS mRNA 16538 19729 . + . ID=g12919.t1;Parent=g12919;Name=g12919.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS exon 16538 19729 . + . ID=g12919.t1.exon1;Parent=g12919.t1 NODE_560_length_21175_cov_42.7707 AUGUSTUS CDS 16538 19729 . + 0 ID=cds.g12919.t1;Parent=g12919.t1 #PROT g12919.t1 g12919 MLHNGDSDIMAGLRRTLRAWTIGGQSRRWRWVLLALLSSVFLVLVTITSDWASISARGDDFGRVIERELSEPGGDGNVRFAFDDARANSGADSAGDPTEITIPAHARDASNVRCDDISVAIGIHSLSPVLVQTVAALAPHTRDVGITAHTGYELKRATAAVRALSSAIDNVASLIVPLHETANAAVVKMKAIDLTSAPWVLLWDDAFVPRVAAIEWVPTLCKLVEDADRSEKLVVELTIPRAGGDLNYSPRSPDGDAALTSRVLLVRREMVAFITAGGALGLQWPRPVSFLDVLQALPSDSQEPPTIRVDFPGFMDVRAAVESPQERVYAGDVTEYYLDLVHATRRPVVTLVPPPGSPSARFWLWSMRRASGDAMYTPDSDLTELGEHAVERMLANCRIRARVPHVHMDSLRWGQHDTRVLSYIRATSRVDLGLIDESACLASVVSAEEVLGERTPDAHSRQFIPHSSVKYAPVGAWIGPLLHLAVSEVDGHLDGSSLAYSRATGLLNFLVRGRRGASLSPDNSNNDGAAFGENSDSPLEESFTRAPLFPKRTLRECIASMERGERNALDTGGTLSVVVVGQMEDVHDAAALKWRKFIKSVNEPTPPTSSAFSLPDDPRDYDWTELDRLAADMCGATVVVCANPRDWMCSLLAVSMRAVPVAPNDGATLLWPWYMRKYVRLEWDAFLDAVESSVNPAVVAKELTLALVESASVVTSALPLKSLRGFEAWTYAINRNVDMFMDAHTISTRDPLANPSPLRLRKGQDVAVVVFVAGCGQWQNDVKQLPVRGNTGDIYAGFAAQAVFETAAGRSKDDGVTLSFVCSTSPEQFANTTALAVVGSIVEMAASIDNAIVWGPGLIAPGALKFKPSKTAQWMGVRGPSTRDTLLSQVGVNPPVVGDPGWLARLTHGELEDVPFSRSVQTHALCFVMHSVDYDNFTSAFPHLKSRTISNNERLTWYMRSIRRCKHVVSSSLHGIVFAHAFDIPALPIVVTDLVHGGNYKFRDYYRSHGVWEFRERLRVGEAHFGLGVGEWVALVRKAPQPAFPTNPFAILRSFPAVLISSE* # PASA_UPDATE: g5893.t1, single gene model update, valid-1, status:[pasa:asmbl_2075,status:12], valid-1 NODE_1595_length_10287_cov_38.3835 . gene 6124 7827 . - . ID=g5893;Name=g5893.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 6124 7827 . - . ID=g5893.t1;Parent=g5893;Name=g5893.t1 NODE_1595_length_10287_cov_38.3835 . exon 7809 7827 . - . ID=g5893.t1.exon1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . CDS 7809 7827 . - 0 ID=cds.g5893.t1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . exon 7634 7675 . - . ID=g5893.t1.exon2;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . CDS 7634 7675 . - 2 ID=cds.g5893.t1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . exon 7094 7240 . - . ID=g5893.t1.exon3;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . CDS 7094 7240 . - 2 ID=cds.g5893.t1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . exon 6768 6861 . - . ID=g5893.t1.exon4;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . CDS 6768 6861 . - 2 ID=cds.g5893.t1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . exon 6124 6358 . - . ID=g5893.t1.exon5;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . CDS 6193 6358 . - 1 ID=cds.g5893.t1;Parent=g5893.t1 NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 6124 6192 . - . ID=g5893.t1.utr3p1;Parent=g5893.t1 #PROT g5893.t1 g5893 MGLYGAAPSLSQRGSRPSSRDQPSKMVRISVLNDALNSIVNAERKGKRQVLIRPSSKVIVKFLTVMMKHGYIGEFEIIDDHRAGKIVVELNGRINKCGVISPRFDIAVGDLDRWSANLLPSRQFGYVVLTTSAGIMDQEEAKRKHTGGKILGFFY* # ORIGINAL: g5895.t1 original gene structure, not modified by PASA NODE_1595_length_10287_cov_38.3835 AUGUSTUS gene 8741 10164 . - . ID=g5895;Name=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS mRNA 8741 10164 . - . ID=g5895.t1;Parent=g5895;Name=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS exon 9952 10164 . - . ID=g5895.t1.exon1;Parent=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS CDS 9952 10164 . - 0 ID=cds.g5895.t1;Parent=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS exon 9483 9750 . - . ID=g5895.t1.exon2;Parent=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS CDS 9483 9750 . - 0 ID=cds.g5895.t1;Parent=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS exon 8741 9255 . - . ID=g5895.t1.exon3;Parent=g5895.t1 NODE_1595_length_10287_cov_38.3835 AUGUSTUS CDS 8741 9255 . - 2 ID=cds.g5895.t1;Parent=g5895.t1 #PROT g5895.t1 g5895 MRTNHINRAASPVPKSRGSAASSSGGSSQPQTPTLTSTSFASAFASTSTRNSPGTRRQSAGTPGGANKSIKVSDIAKPVSTFVNFIGNSFRSVTENNASSSSSAGASGQVPPPSGADAKHVRNSIDKEPSSVVRPQTPSRAEKGVSRQKSATGTVGASSSEETEQRLREIEAMNKACARRIQRHLKVLEAELLKGVTLSSAANSADPSALDVKAVYLAIAGIKHTKDILYGNLPFDAAVEFASDPDIDADADADAETDASAGAGASAGASGGASGGASGGAHGDDLPRSDRTSKTTARSLFGDDDDGETVSASDGPAFSAAAIDPLGALLA* # PASA_UPDATE: g5892.t1, single gene model update, valid-1, status:[pasa:asmbl_2071,status:12], valid-1 NODE_1595_length_10287_cov_38.3835 . gene 4374 5864 . + . ID=g5892;Name=g5892.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 4374 5864 . + . ID=g5892.t1;Parent=g5892;Name=g5892.t1 NODE_1595_length_10287_cov_38.3835 . five_prime_UTR 4374 4419 . + . ID=g5892.t1.utr5p1;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . five_prime_UTR 4684 4703 . + . ID=g5892.t1.utr5p2;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . exon 4374 4419 . + . ID=g5892.t1.exon1;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . exon 4684 4789 . + . ID=g5892.t1.exon2;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . CDS 4704 4789 . + 0 ID=cds.g5892.t1;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . exon 5065 5171 . + . ID=g5892.t1.exon3;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . CDS 5065 5171 . + 1 ID=cds.g5892.t1;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . exon 5498 5864 . + . ID=g5892.t1.exon4;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . CDS 5498 5598 . + 2 ID=cds.g5892.t1;Parent=g5892.t1 NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 5599 5864 . + . ID=g5892.t1.utr3p1;Parent=g5892.t1 #PROT g5892.t1 g5892 MSSWRAFSTGLRELRIHLCNTSDASKGVREFIERQYVGLKKANPSLPILVRECADVEPRLYARFDYGQETKVSLSNLTEAQVAERVRELEAAASQRK* # PASA_UPDATE: g5894.t1, single gene model update, valid-1, status:[pasa:asmbl_2073,status:12], valid-1 # PASA_UPDATE: g5894.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2072,status:12], valid-1 NODE_1595_length_10287_cov_38.3835 . gene 8110 8592 . + . ID=g5894;Name=g5894.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 8110 8592 . + . ID=g5894.t1;Parent=g5894;Name=g5894.t1 NODE_1595_length_10287_cov_38.3835 . five_prime_UTR 8110 8127 . + . ID=g5894.t1.utr5p1;Parent=g5894.t1 NODE_1595_length_10287_cov_38.3835 . exon 8110 8364 . + . ID=g5894.t1.exon1;Parent=g5894.t1 NODE_1595_length_10287_cov_38.3835 . CDS 8128 8364 . + 0 ID=cds.g5894.t1;Parent=g5894.t1 NODE_1595_length_10287_cov_38.3835 . exon 8463 8592 . + . ID=g5894.t1.exon2;Parent=g5894.t1 NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 8463 8592 . + . ID=g5894.t1.utr3p1;Parent=g5894.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 8110 8592 . + . ID=g5894.t1.1.5b6be70a;Parent=g5894;Name=g5894.t1 NODE_1595_length_10287_cov_38.3835 . five_prime_UTR 8110 8127 . + . ID=g5894.t1.1.5b6be70a.utr5p1;Parent=g5894.t1.1.5b6be70a NODE_1595_length_10287_cov_38.3835 . exon 8110 8364 . + . ID=g5894.t1.1.5b6be70a.exon1;Parent=g5894.t1.1.5b6be70a NODE_1595_length_10287_cov_38.3835 . CDS 8128 8364 . + 0 ID=cds.g5894.t1.1.5b6be70a;Parent=g5894.t1.1.5b6be70a NODE_1595_length_10287_cov_38.3835 . exon 8466 8592 . + . ID=g5894.t1.1.5b6be70a.exon2;Parent=g5894.t1.1.5b6be70a NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 8466 8592 . + . ID=g5894.t1.1.5b6be70a.utr3p1;Parent=g5894.t1.1.5b6be70a #PROT g5894.t1 g5894 MVVIRVRRMPGYQMFAVLLVGIAGGFYIFDEPLRRYAEDQKKAQTDARIAAERQQLLAAATAAAQSGTSDGTAPPPAR* #PROT g5894.t1.1.5b6be70a g5894 MVVIRVRRMPGYQMFAVLLVGIAGGFYIFDEPLRRYAEDQKKAQTDARIAAERQQLLAAATAAAQSGTSDGTAPPPAR* # PASA_UPDATE: g5891.t1, single gene model update, valid-1, status:[pasa:asmbl_2074,status:3], valid-1 NODE_1595_length_10287_cov_38.3835 . gene 3036 4158 . - . ID=g5891;Name=g5891.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 3036 4158 . - . ID=g5891.t1;Parent=g5891;Name=g5891.t1 NODE_1595_length_10287_cov_38.3835 . five_prime_UTR 4130 4158 . - . ID=g5891.t1.utr5p1;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . exon 4055 4158 . - . ID=g5891.t1.exon1;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . CDS 4055 4129 . - 0 ID=cds.g5891.t1;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . exon 3696 3848 . - . ID=g5891.t1.exon2;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . CDS 3696 3848 . - 0 ID=cds.g5891.t1;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . exon 3036 3349 . - . ID=g5891.t1.exon3;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . CDS 3245 3349 . - 0 ID=cds.g5891.t1;Parent=g5891.t1 NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 3036 3244 . - . ID=g5891.t1.utr3p1;Parent=g5891.t1 #PROT g5891.t1 g5891 MAQASHAKLPLLGVLRQVIRLTRDKSLFPNGNELLRRHVVQRYREIAEAKDPHFARAKEQDLRDYAALLATNRKRKEIASLYKGESMEQMDRIGASARRVGLRLPFDNNP* # PASA_UPDATE: g5890.t1, single gene model update, valid-1, status:[pasa:asmbl_2070,status:12],[pasa:asmbl_2076,status:12], valid-1 NODE_1595_length_10287_cov_38.3835 . gene 364 2774 . + . ID=g5890;Name=g5890.t1 NODE_1595_length_10287_cov_38.3835 . mRNA 364 2774 . + . ID=g5890.t1;Parent=g5890;Name=g5890.t1 NODE_1595_length_10287_cov_38.3835 . exon 364 555 . + . ID=g5890.t1.exon1;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . CDS 364 555 . + 0 ID=cds.g5890.t1;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . exon 716 964 . + . ID=g5890.t1.exon2;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . CDS 716 964 . + 0 ID=cds.g5890.t1;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . exon 1146 2774 . + . ID=g5890.t1.exon3;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . CDS 1146 2357 . + 0 ID=cds.g5890.t1;Parent=g5890.t1 NODE_1595_length_10287_cov_38.3835 . three_prime_UTR 2358 2774 . + . ID=g5890.t1.utr3p1;Parent=g5890.t1 #PROT g5890.t1 g5890 MPFFDQIALQGQDGHDIHLSVIRRDDWFGEIALLENTTRTATITASQDCLLLYLTRERFQTFLKVCPEVLKSTHFENVVRQRTAGTLKSIPFFSVLKTKDFGPLQRFDEEKLGLLGSLFTFSQFGSGDVIFREGDEGTCLFIIVYGQVSVIGKNEADQAVQLGTLKDGEWLGETALFNLTRRTATIIAEIPTVVLRLDQENFQRFLEVAPEFRGAIEQMVSQRTAERLSHIPFFASVKENKPWSKLGLLGGLFVFEEFAADTVVCKQGENGNKFYIVVRGSLEVTTNNHLGERVVLTKLKNSDWFGEIALMQDAPRTATIVTTSPCILLSITADKFTKFLSIAPELKDTCQAIMNLRTATTLKTVRLFSNIKENKPWSKFELLASLLVYEQREKDEVIFSSGDAPDKLYVILKGSVRLSLPNDAGDVFPEPLKTGDYFGEVELLEEEPRLSSAIALEGSFFLTMSKDAFKKFVRLAPEAARSMNDEATRRRSIGDEAQRRRSSSDPGDPNAAILAAAHATPTVATISETAEGESGMKSAASDASLSGIAV* # ORIGINAL: g2801.t1 original gene structure, not modified by PASA NODE_7849_length_403_cov_37.8902_potentialcontaminant AUGUSTUS gene 1 303 . - . ID=g2801;Name=g2801.t1 NODE_7849_length_403_cov_37.8902_potentialcontaminant AUGUSTUS mRNA 1 303 . - . ID=g2801.t1;Parent=g2801;Name=g2801.t1 NODE_7849_length_403_cov_37.8902_potentialcontaminant AUGUSTUS exon 1 303 . - . ID=g2801.t1.exon1;Parent=g2801.t1 NODE_7849_length_403_cov_37.8902_potentialcontaminant AUGUSTUS CDS 1 303 . - 0 ID=cds.g2801.t1;Parent=g2801.t1 #PROT g2801.t1 g2801 MCRTAQNAHITDLSALRHACFVELNNLEELEDLRCLEKVREVVLKDCPCISTLPAVTYLRAFTWHDSTLKSIPPELAGVQFLDLSSSRKLEDVSAARAVRE # ORIGINAL: g5199.t1 original gene structure, not modified by PASA NODE_335_length_26621_cov_43.1093 AUGUSTUS gene 15938 17590 . - . ID=g5199;Name=g5199.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS mRNA 15938 17590 . - . ID=g5199.t1;Parent=g5199;Name=g5199.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 15938 17590 . - . ID=g5199.t1.exon1;Parent=g5199.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 15938 17590 . - 0 ID=cds.g5199.t1;Parent=g5199.t1 #PROT g5199.t1 g5199 MHKNKSQAALFASAQTDTEEDAAIDIVGTETLLANGRANVIPKPLLRTTEQMGLSTGDPAAGLGVLRPSSGGAIKRRMTSPAAARPVVPNAETRPASAEQSFKRHSLSLSPSESQSEMEHRQLPSGAHARLSGLSLTRGNNASADSFLGVTAQQHNSPSSMTTLYLGSNTKLTASSAGPLNQCGTASGSPTPTFCDSSLSSPIGRRSSSAAAQNAVRSPAQSRIGRNNNLKRTSRDSGVGSSSSLAESQAGMRSIVDIFNFEEVVGANSSGNKRGGSGRLSVDDDDSAVTPQDLRLSLSRLCPLPPIGGDANITGLGFTGVSQNSNGSPVARPNDAYALPLGTDFENSPSPTRRHMMRPPPLGAILPYGATAHSVESAHCGRSTASPSPFTPLSASADFDLTNRHFGFVRRLSEEHMPCDVPRRHPIGHFERGPSFSNAPVTPLAGLSAPILAEAEEPAEPPRMKVDMGSVANIFSFDAQAIRDAADDCHHCLGSESAHSLGGQSPCLALLSPETTHRHPPVRRRSSSPLADVAARVERLEKDNCTEEIE* # PASA_UPDATE: g5201.t1, single gene model update, valid-1, status:[pasa:asmbl_5930,status:12], valid-1 NODE_335_length_26621_cov_43.1093 . gene 20638 25904 . + . ID=g5201;Name=g5201.t1 NODE_335_length_26621_cov_43.1093 . mRNA 20638 25904 . + . ID=g5201.t1;Parent=g5201;Name=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 20638 20685 . + . ID=g5201.t1.exon1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 20638 20685 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 20846 20941 . + . ID=g5201.t1.exon2;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 20846 20941 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 21037 21255 . + . ID=g5201.t1.exon3;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 21037 21255 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 21537 21736 . + . ID=g5201.t1.exon4;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 21537 21736 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 21963 22059 . + . ID=g5201.t1.exon5;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 21963 22059 . + 1 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 22313 22405 . + . ID=g5201.t1.exon6;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 22313 22405 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 22617 22744 . + . ID=g5201.t1.exon7;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 22617 22744 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 23003 23164 . + . ID=g5201.t1.exon8;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 23003 23164 . + 1 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 23347 23473 . + . ID=g5201.t1.exon9;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 23347 23473 . + 1 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . exon 23730 25904 . + . ID=g5201.t1.exon10;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . CDS 23730 25754 . + 0 ID=cds.g5201.t1;Parent=g5201.t1 NODE_335_length_26621_cov_43.1093 . three_prime_UTR 25755 25904 . + . ID=g5201.t1.utr3p1;Parent=g5201.t1 #PROT g5201.t1 g5201 MSKLSSYKPSLADRPKVGFFRSDMSCQTDSSEIVDLKEMIHVFRHLREELGDLRQDLSRSKTVLHADYDAKLSDRVIELYCRVNDKVSFLEKVHADSIDRVRHGCRTQLADAIAQIHGEHKAYLKKAIVALKAQHEQEINGANARLVNLKRQLYDYQQIINWLQSQVPQGTVRTRLPAFLLQPSNKHVLSGLSDSFKSMADEMHGAGGDTPPIGQIRRESAPNPMAPDPITKAMEDTLSDRLNEIFQLESELRERDGSIAELQTDNEQLREELTNLREMMDIQMIDDDGGTGRRWATEKEIEARLERKYALRLEALEERHKGEMQQIRSDFNESNRRWAKKLLVVQNAIYKLHDENIVATIVSKQSAVLQYASVITKHADSPNSTKGSHLPRVGSRRLKPANGSGGSTASINSMVAGSLPSLRQTSGSGKRPLKPLKSGSGVLASVEATSNDVSQWSINGDADAEVGAGALQNVVGSGGVDGRPSSPHNSGSGADSRTRSPSARTRPLSASQASVGAVRKLSPDHVPKKHSPLALDGMARPSSARVVGSRHGEWGDREEHKSSPSLAGNAPQVRPATTGSAVRSQAVVVPKATEATEATPAATTEDGDQQQPRDDYGASSNPASSRPASAGVGVETREASLAVEESQGEGVVAVLPGGQTAPDAGGAVGPGEGVLSEGQSPNGAGPTAPATVVTAVVVAAGETGEGDAAPSSSHGPAASQPDLDGTSPGTAAGERAERGEDHPLSAQPETDGTSPGTAAGERGEDHPLSAHPETDGTSPGTAAGERAGHGEDHPLSVQSAAHDDARPHTSEVAPTATHQSSECAEVARDANNNVESAEKSATDSGAPHAPAAGAHNHESANTRRSRASSHAEVREDDHDLDQSVCSATDTISRTVSEHGLTESYPRSALDTSYAPGHGPLLGRRHEEVLADDPDLELYIPLAVSHESLAVSMAAIGDGVSSPATASKSHATLTTSASGNSFANFDGDDAHSVRSKQHTPDLQSAPMADGDVTKNGGVTDDDGVASSAVETGGDAPVSDGISESGSMPEGGGGVESVDAQPQSSS* # ORIGINAL: g5195.t1 original gene structure, not modified by PASA NODE_335_length_26621_cov_43.1093 AUGUSTUS gene 4264 5310 . - . ID=g5195;Name=g5195.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS mRNA 4264 5310 . - . ID=g5195.t1;Parent=g5195;Name=g5195.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 4264 5310 . - . ID=g5195.t1.exon1;Parent=g5195.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 4264 5310 . - 0 ID=cds.g5195.t1;Parent=g5195.t1 #PROT g5195.t1 g5195 MDTHASPFPYFVWLYTSITAAAIVVPRYPKVGVLLAVGCLPAAYYLPLSAGLRAFFGIASLFYHLRVWQMAVRPANYAHLSWQMRLIQTIMFFDLSHARKVDAVRRRSIVKSALVESAVRFAVAAAFTVGCKLLSGHIPPREVGDSLALKDVIHGAPVWICTMCAWFAHLLVMCPLFRLFFAMFDLESPRLFNEPLKANSLGEFWGKRWNRAVQPLLSDLIYTPLVSHGFPRDIAVVTTFLGSGILHAYPLVVGSGLPWTGVWACAYFVAQAIIMLAERHVSRMWWGSSAHSVGAGGKGATGKDKSPREVHLAGSSAARNIRRLRTLLFVVLPAPLIMHPLLHVIVHN* # ORIGINAL: g5198.t1 original gene structure, not modified by PASA NODE_335_length_26621_cov_43.1093 AUGUSTUS gene 12931 14142 . - . ID=g5198;Name=g5198.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS mRNA 12931 14142 . - . ID=g5198.t1;Parent=g5198;Name=g5198.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 12931 14142 . - . ID=g5198.t1.exon1;Parent=g5198.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 12931 14142 . - 0 ID=cds.g5198.t1;Parent=g5198.t1 #PROT g5198.t1 g5198 MRTLSRSTVHIAFDSDDDEAPINIVGSPSALRDGLGHVVPKPSSASPRPPRRSRPLSCTQRMPLQVKTPDADSSVEFIREERQRPNSAGGNNRVRASSQPLSAVAASMQVSLSASRLAPINITPATPSNASLTCTSGLEQLAETASSADLSRMSLFPLIPSIESTATESSSPRRHAPTVWSSQEMSTSSLTSPRDSAYASASSFESQSELQHLQNTSFVRLNKSLEKAAVWPQPPSQPRAQSARAAIGRRTLSMPDSLGSVSGLSEQCPSAPKLSRRMLGQSAMESTPLSSSFTKVGLRRRWSAETMPSDLVYTPRSRISVGTNFSTQWNRSTEIVAEADEWTETFQLDDSLTTHEGADKSTSDCESPQGKRSMQRKSLSPMSAVAARVQRLSRDNSAAEICE* # ORIGINAL: g5196.t1 original gene structure, not modified by PASA NODE_335_length_26621_cov_43.1093 AUGUSTUS gene 5783 7434 . - . ID=g5196;Name=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS mRNA 5783 7434 . - . ID=g5196.t1;Parent=g5196;Name=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 7297 7434 . - . ID=g5196.t1.exon1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 7297 7434 . - 0 ID=cds.g5196.t1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 6990 7166 . - . ID=g5196.t1.exon2;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 6990 7166 . - 0 ID=cds.g5196.t1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 6657 6764 . - . ID=g5196.t1.exon3;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 6657 6764 . - 0 ID=cds.g5196.t1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 6310 6484 . - . ID=g5196.t1.exon4;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 6310 6484 . - 0 ID=cds.g5196.t1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 6064 6186 . - . ID=g5196.t1.exon5;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 6064 6186 . - 2 ID=cds.g5196.t1;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 5783 5868 . - . ID=g5196.t1.exon6;Parent=g5196.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 5783 5868 . - 2 ID=cds.g5196.t1;Parent=g5196.t1 #PROT g5196.t1 g5196 MVHTMSKISKECIVRLTPSKLHFVLAKDGTSAPSASASKVWSEITKDSIFGEYRLESKHPNNEILMSLGLDHLNRALKTAHGAIGVVIKMAKKQDTPYLSMEIHKLSSTLKTWTISQDVPIVVMSHDLSNQYLEPDLPQPAVSITLPPSKFLRNIIDRMKALDHFVTISANMRGQLNFRVETNTVNVTTYFRDLENAKWREGQEPDVPRDPHAMAEARIDIRKFSQFLYGSGIQANNVICSIVEGQAAILFVLTDETSLIYYVPVSNT* # PASA_UPDATE: g5194.t1, single gene model update, valid-1, status:[pasa:asmbl_5928,status:12],[pasa:asmbl_5929,status:12], valid-1 NODE_335_length_26621_cov_43.1093 . gene 412 3911 . + . ID=g5194;Name=g5194.t1 NODE_335_length_26621_cov_43.1093 . mRNA 412 3911 . + . ID=g5194.t1;Parent=g5194;Name=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 412 512 . + . ID=g5194.t1.exon1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 412 512 . + 0 ID=cds.g5194.t1;Parent=g5194.t1;5_prime_partial=true NODE_335_length_26621_cov_43.1093 . exon 928 1033 . + . ID=g5194.t1.exon2;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 928 1033 . + 1 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 1213 1280 . + . ID=g5194.t1.exon3;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 1213 1280 . + 0 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 1517 1612 . + . ID=g5194.t1.exon4;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 1517 1612 . + 1 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 1930 2050 . + . ID=g5194.t1.exon5;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 1930 2050 . + 1 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 2213 2366 . + . ID=g5194.t1.exon6;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 2213 2366 . + 0 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 2880 2954 . + . ID=g5194.t1.exon7;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 2880 2954 . + 2 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . exon 3336 3911 . + . ID=g5194.t1.exon8;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . CDS 3336 3721 . + 2 ID=cds.g5194.t1;Parent=g5194.t1 NODE_335_length_26621_cov_43.1093 . three_prime_UTR 3722 3911 . + . ID=g5194.t1.utr3p1;Parent=g5194.t1 #PROT g5194.t1 g5194 VGLAEYEHWVKRFSSMAEVGSRERNPITEKVHARIGLMGNPSDGYFGKTISLSIENFWAEVSIHESEQLVLVPHPLNDPTSFGSLCDLHGISRKEGYQGGLRLMQASCKRFYEYCGTHGIALAKKNFTLRYDTNIPRQVGLAGSSAIVTATIKCLIRFFNLTETDIPINLRPRLILTVETEELGIAAGLQDRVIQVLGGLVFMDFDKEYMAQHLHGKYEPMDVSLAPSLWLAFLSDPSDSGKIHNDVRVRYNQGDPEVVQAMQTFASYAEEARTALVNGDRARLADLMDMNFDLRRKIFGEAVIGRSNLRMVEIGRAHGAAVKFPGSGGAVVGMCRDPSRVDELKCALEREGFVFVPIKSHAPSPSNN* # ORIGINAL: g5197.t1 original gene structure, not modified by PASA NODE_335_length_26621_cov_43.1093 AUGUSTUS gene 8137 12563 . + . ID=g5197;Name=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS mRNA 8137 12563 . + . ID=g5197.t1;Parent=g5197;Name=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 8137 8178 . + . ID=g5197.t1.exon1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 8137 8178 . + 0 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 8365 8479 . + . ID=g5197.t1.exon2;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 8365 8479 . + 0 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 8655 8817 . + . ID=g5197.t1.exon3;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 8655 8817 . + 2 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 8982 9050 . + . ID=g5197.t1.exon4;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 8982 9050 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 9308 9432 . + . ID=g5197.t1.exon5;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 9308 9432 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 9672 9840 . + . ID=g5197.t1.exon6;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 9672 9840 . + 2 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 10030 10098 . + . ID=g5197.t1.exon7;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 10030 10098 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 10304 10446 . + . ID=g5197.t1.exon8;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 10304 10446 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 10689 10894 . + . ID=g5197.t1.exon9;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 10689 10894 . + 2 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 11066 11234 . + . ID=g5197.t1.exon10;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 11066 11234 . + 0 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 11375 11441 . + . ID=g5197.t1.exon11;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 11375 11441 . + 2 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 11578 11739 . + . ID=g5197.t1.exon12;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 11578 11739 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 12023 12295 . + . ID=g5197.t1.exon13;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 12023 12295 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS exon 12467 12563 . + . ID=g5197.t1.exon14;Parent=g5197.t1 NODE_335_length_26621_cov_43.1093 AUGUSTUS CDS 12467 12563 . + 1 ID=cds.g5197.t1;Parent=g5197.t1 #PROT g5197.t1 g5197 MRAIIILIALGVAALVSAAAPPQSEVFVVSDAPEFKKLLRTRTNVLVLSYNTAADIAAVKSEFVKASIEAKGTATLIQVECGTVPGKKLCRQLKIEPAGGFELRHFKSGNFNKKYDRRLVASSIVKFLQEPDGDMPWEEDSTAGDVVHLTDKTIDRVLAQKKPTLVMFYAPWCGHCKSLKPDYALAATELKAAGGGHIIAAIDSNSADGRRSGSKYGVQGFPTIIYFENGQEVKKFEGERNKKGIVSFMKDPNAPPPKPKDPEPQWKDSPSEVVHLGDATFDEFIATNPSVLVMFYAPWCGHCKNMKPEFVSAAAAMKAGGISGALAAVDCTIESAACRKFDVKGYPTVIYFKDGAKDRSFGFPRTKDGIIDFMKDPRDPPPPPPPEPEWHEDPKTNVTHLTEDTFHEELKKKKHALVMFYAPWCGYCKKVKPAYDEAAGLLDNPRATLAALDATKAERLGAEFKVTGYPTFKTFVYGQLQGDWSGQRTVDAFKSFYNEKPLAVNLDFFGPRATTLVRHAGESDLGKMKSPTMVMFYAPWEEQSKLLAIEYADAAKKLESHSKLVAMDCSQFPHICDENKVVSYPSFLAMRKDKVVESFAGPFTSGDIVRFMKGDSAAKSEL* # PASA_UPDATE: g5200.t1, single gene model update, valid-1, status:[pasa:asmbl_5926,status:3], valid-1 NODE_335_length_26621_cov_43.1093 . gene 18374 20028 . - . ID=g5200;Name=g5200.t1 NODE_335_length_26621_cov_43.1093 . mRNA 18374 20028 . - . ID=g5200.t1;Parent=g5200;Name=g5200.t1 NODE_335_length_26621_cov_43.1093 . five_prime_UTR 19960 20028 . - . ID=g5200.t1.utr5p1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . exon 19909 20028 . - . ID=g5200.t1.exon1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . CDS 19909 19959 . - 0 ID=cds.g5200.t1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . exon 19560 19812 . - . ID=g5200.t1.exon2;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . CDS 19560 19812 . - 0 ID=cds.g5200.t1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . exon 19331 19378 . - . ID=g5200.t1.exon3;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . CDS 19331 19378 . - 2 ID=cds.g5200.t1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . exon 18374 19146 . - . ID=g5200.t1.exon4;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . CDS 18509 19146 . - 2 ID=cds.g5200.t1;Parent=g5200.t1 NODE_335_length_26621_cov_43.1093 . three_prime_UTR 18374 18508 . - . ID=g5200.t1.utr3p1;Parent=g5200.t1 #PROT g5200.t1 g5200 MRAHTAAMQGDVIDGQVTSTGTTHSDLELFLRPASGPGPCHHPLGPVVEDSKDDVFGTSYGSGCSWQSDSTFGDASDGAKWSASGAGDSEDSESVTSTAGHSSRALGLRSRTRGKRKSKREKERLSLDSQTMQLALTDIDTDRGAGEAVFPLPRPVVSTSTLSGEGRMRKSQSMGSMPSRSPHAMPHGTPPRSGGSQPSKATDCPSSRSRPLHFQHSPSLPVSTSAVTSSGSDGLAPTQHTLGYGSHMTRPRGADPMRDLPAQSIAASRPAACVHPPAPSLKSQSADRLFNGSAAHLAVVGEPRRHLSWADIPGDECLSSEDEDFNVKS* # ORIGINAL: g5449.t1 original gene structure, not modified by PASA NODE_765_length_17974_cov_44.2545 AUGUSTUS gene 202 703 . - . ID=g5449;Name=g5449.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS mRNA 202 703 . - . ID=g5449.t1;Parent=g5449;Name=g5449.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 642 703 . - . ID=g5449.t1.exon1;Parent=g5449.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 642 703 . - 0 ID=cds.g5449.t1;Parent=g5449.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 202 370 . - . ID=g5449.t1.exon2;Parent=g5449.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 202 370 . - 1 ID=cds.g5449.t1;Parent=g5449.t1 #PROT g5449.t1 g5449 MAQSFIRTSGRLFWDAVKRARHYATGVKTSVSHDARVYLNNESEMIRGRTIFSGAIVSLAWYSSCYCAFTLPCSLW* # ORIGINAL: g5452.t1 original gene structure, not modified by PASA NODE_765_length_17974_cov_44.2545 AUGUSTUS gene 13541 14999 . + . ID=g5452;Name=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS mRNA 13541 14999 . + . ID=g5452.t1;Parent=g5452;Name=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 13541 13572 . + . ID=g5452.t1.exon1;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 13541 13572 . + 0 ID=cds.g5452.t1;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 13846 13997 . + . ID=g5452.t1.exon2;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 13846 13997 . + 1 ID=cds.g5452.t1;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 14482 14616 . + . ID=g5452.t1.exon3;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 14482 14616 . + 2 ID=cds.g5452.t1;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 14809 14999 . + . ID=g5452.t1.exon4;Parent=g5452.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 14809 14999 . + 2 ID=cds.g5452.t1;Parent=g5452.t1 #PROT g5452.t1 g5452 MVDGDLRLYESQAIIRYLAQKHADIVASHWYPAAHARRAMIEQYLDWNLSTLRPTVSAFVRASYFFPLTKNIPVDVAAAQAAKQALAEQVKALDSILASHSTQFLAGDEMSIADLCLVCELSQTWVGDFDLSPFVHVTAWMAKVEALPNYRNNFARLVEAKAMLASRGW* # ORIGINAL: g5451.t1 original gene structure, not modified by PASA NODE_765_length_17974_cov_44.2545 AUGUSTUS gene 10091 11595 . - . ID=g5451;Name=g5451.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS mRNA 10091 11595 . - . ID=g5451.t1;Parent=g5451;Name=g5451.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 11031 11595 . - . ID=g5451.t1.exon1;Parent=g5451.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 11031 11595 . - 0 ID=cds.g5451.t1;Parent=g5451.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 10091 10908 . - . ID=g5451.t1.exon2;Parent=g5451.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 10091 10908 . - 2 ID=cds.g5451.t1;Parent=g5451.t1 #PROT g5451.t1 g5451 MQLLLRADEPYGSARVAMVRALHKFARTINKSFVILTGSSADLRTRLLKYGPESEVQRFRAYHKFNNSLCTFYHVGALRTVESLKSYLKVRYPTRQFDDADVRRLLHETGGICRLVHAIVGCSQADGKKRPTLRRLTPELVNSPANGFVVAVHIIRIAQGEALSAALSGPAPVYLVPDQVSVPLYGLVRHTELARPIDARTYYNTSMSSKDIIAFRQSLEIVHSNGVNTGQVFEDFLRPRLANCADFAAVLGRFSAHVVSVYDGEHLVDDCQATADQFGELDGCYCRWTNEIGIDSVAFRFSDGGRTLRLSGWQNLGGHKAKPKDRAGIMGGDIDKYRMQPSDANNHYSMAGTIVLAERGFEKLKGGIAKAFPSINVTVDRLVVTTTKDDITSALKTLCGIHAANVGFNIVFRSEQEWICPCLEPELQTMMSWFLRKVKRAHQLICLLACILRYLCKFST* # PASA_UPDATE: g5453.t1_g5454.t1, single gene model update, valid-1, status:[pasa:asmbl_9259,status:12], valid-1 NODE_765_length_17974_cov_44.2545 . gene 15845 17819 . - . ID=g5453_g5454;Name=MERGED%3A%20g5453.t1 NODE_765_length_17974_cov_44.2545 . mRNA 15845 17819 . - . ID=g5453.t1_g5454.t1;Parent=g5453_g5454;Name=MERGED%3A%20g5453.t1 NODE_765_length_17974_cov_44.2545 . exon 17753 17819 . - . ID=g5453.t1_g5454.t1.exon1;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . CDS 17753 17819 . - 0 ID=cds.g5453.t1_g5454.t1;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . exon 17466 17602 . - . ID=g5453.t1_g5454.t1.exon2;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . CDS 17466 17602 . - 2 ID=cds.g5453.t1_g5454.t1;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . exon 17214 17261 . - . ID=g5453.t1_g5454.t1.exon3;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . CDS 17214 17261 . - 0 ID=cds.g5453.t1_g5454.t1;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . exon 15845 16816 . - . ID=g5453.t1_g5454.t1.exon4;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . CDS 16025 16816 . - 0 ID=cds.g5453.t1_g5454.t1;Parent=g5453.t1_g5454.t1 NODE_765_length_17974_cov_44.2545 . three_prime_UTR 15845 16024 . - . ID=g5453.t1_g5454.t1.utr3p1;Parent=g5453.t1_g5454.t1 #PROT g5453.t1_g5454.t1 g5453_g5454 MHSEHTLAQSANLLVDDNWTVKVADFGLTRFGAKLEKNIKTIGTLLWLPPETLLGQCYCGKSDVYSFGIIMWEFLHEKIPFEDEVVDRLVPVDEIARQVATMGARPPVVRPCPLAYFSAMRAAWAQDMQRRPDFDEISVRLAEILSSPSLIAKFAPVVASHVKSGASLSAWLSWKRKGPAISHHSSRRGSGLVTLSIQENDDGGDGTNTNASKSEMIDWASPQAAPANPSTSSHPPTRYPKPTPRSSLTSGLHVDSEEPETVWAVASGECVAFYVDTSLDACLYRVSLSEVIVATPAGAPHEDSFYLAADKLGLVLLGANSEAAATAWAKHLSLRCHQAQSKVTNSN* # ORIGINAL: g5450.t1 original gene structure, not modified by PASA NODE_765_length_17974_cov_44.2545 AUGUSTUS gene 1678 3321 . - . ID=g5450;Name=g5450.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS mRNA 1678 3321 . - . ID=g5450.t1;Parent=g5450;Name=g5450.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS exon 1678 3321 . - . ID=g5450.t1.exon1;Parent=g5450.t1 NODE_765_length_17974_cov_44.2545 AUGUSTUS CDS 1678 3321 . - 0 ID=cds.g5450.t1;Parent=g5450.t1 #PROT g5450.t1 g5450 MSGRRTASVGNAPRQPSTDTTADSAAFDRESYELLLTEITEEFERLPATERLATSGKWSRRKSVDRNKPWNVNSFMVFSNRYRKLLRNRLPDVSNGVLSEMLSRLWKVMSNAQKEEYRLTAERMRQGEEAASDAKLGDESSRESSGDGRVLSASAAVAASVGSPLGPVSPPRALSTADAPRTNHDRLGGKRGGRGKKAVASSGGQPSPVQVGGDAPSTSPAHKSQPARLLSGESSHAMQVAATRLRMPTGSSERLYAAVRSVDRAQAHLLRVHVQPPHTNKHGPLADIGYSRPLSDGAEWMHIHDRDDGAVAGDPAAPVDGRWQPQHSAWGHADHGDGDEDAQAWQYGSGTTRHPLPLPPHWDLSGLVFAPEGSLPDLFGDGMRGSDDGTGAPPRNLTARNQMPRAPVTSRPLTAGAVEGASFQDNGSIQRHILQSELSHHLMGSQEHTRGERPPSLDHAGFRTGVLNGDHQDGVSAHDSGVVRQASRGSVGLSSGGNVDGADYSASHNNAMPMYMQQLQQTPSTEHVQQGSESEPPGYWRMNVTLL* # PASA_UPDATE: g4804.t1, single gene model update, valid-1, status:[pasa:asmbl_3962,status:12], valid-1 NODE_2296_length_6826_cov_38.5383 . gene 147 5268 . + . ID=g4804;Name=g4804.t1 NODE_2296_length_6826_cov_38.5383 . mRNA 147 5268 . + . ID=g4804.t1;Parent=g4804;Name=g4804.t1 NODE_2296_length_6826_cov_38.5383 . five_prime_UTR 147 147 . + . ID=g4804.t1.utr5p1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . exon 147 213 . + . ID=g4804.t1.exon1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 148 213 . + 0 ID=cds.g4804.t1;Parent=g4804.t1;5_prime_partial=true NODE_2296_length_6826_cov_38.5383 . exon 651 3374 . + . ID=g4804.t1.exon2;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 651 3374 . + 0 ID=cds.g4804.t1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . exon 3661 3744 . + . ID=g4804.t1.exon3;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 3661 3744 . + 0 ID=cds.g4804.t1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . exon 3865 3972 . + . ID=g4804.t1.exon4;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 3865 3972 . + 0 ID=cds.g4804.t1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . exon 4167 4266 . + . ID=g4804.t1.exon5;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 4167 4266 . + 0 ID=cds.g4804.t1;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . exon 4460 5268 . + . ID=g4804.t1.exon6;Parent=g4804.t1 NODE_2296_length_6826_cov_38.5383 . CDS 4460 5268 . + 2 ID=cds.g4804.t1;Parent=g4804.t1 #PROT g4804.t1 g4804 GSRSLHAGGDGGCSAISEGHVQAGASTETDEDAQAWHVSSPVHSAPQEGGIGTDEGTSSSGVRNGVSDEANDSTTSTPSSRPILTFDEWRELELRLSASTEAPGEEESAHDTLARAQATKKYQRKRRREGARRSGRFNYASLDCSAKVVGSNAEAQSTGAILTEHKDHYMLNPCSADRWVVIELCEDILVDSIDVANHEMFSSTFKELKVSASDRYPTRDWRELGTFAAADVRAVQTFEIEEPILWAKYLRFDFRGRHGNEFYCPLTIVRVYGTTMMEEFKLNMGEDAGDVVSADSVGDGGGDTASDAYIRMGKLPHVIDKATRMIRDFFGAKEAPRPPADPSVGHVSGGDRDEGAGGSVDVESALADDGVSASVSGGHDGVASIDERADGSLRAHAESVAAVDERPIVTLMGADDDDDDGDNRTDGSLDGAIVTLLPDDDDENGSVAPNSSFLSIDGHTPFHSVSDFGEHMRVRRIGVPFSATDGTVNQLSTRREMTAADPIGSAADALSVVAAHREGSSSLETQTQTQTQKQTQTQTQRDMVVDAAERGDEAQLSVGTDALSVESIDGNVDAAAHITAQNTTNGVTTSRESETAVNVGRLDNASASMDGAVVALSGESTSNVESVKPLAGATAVDVPSSAASAAAVDVNTPSVGAMGIGAVAGDAHGEGKDDGHVPVSALSVTSLTQAQETPYENASAARVVVTPHVTSSASTSLPSPSASFPPIATVVAVGNRHSEESALNGPPKHSVAAEDAIAVNANPTHESAAGTGIPVEKLRVKIEMDVTPPSLGPTTTASSVTTAAHPTQSSHATQSTTAHASTATTAASSPVPASASSSASASSSALASASASTTGNATVAVPSVAPSSARHSATASPTTASAPHHVPQPSQSTLGTQESVFASISNRIKALEVNVSLTSRYLDTLSARYKESLDDMQKALDKRMVAIGESATRTESDLKKRQSEMMEGLRELIDARLTTIHSQVLLEIEAIRAEDAERSRVLRRDVMLGMCVACVVTLLLSLLLRRTPATTAATTASSSAFQSTGVSADNSPLVRMPSRRRSSSLGLPGYGDESGTPPRSKPPLSPIVIPHSSNHEMVDNNNNKNDDGDDPGRCESAPPSSLNRHFSISVLSRDTPSPPPPSSSNPRASLPHTHALGLATGMLRAAGDGDNFQLVGRSSKASRNAEKRKSLLSGGGGSSKQLQSSSSMPSVASALASGGNKPVVSVSGSASSSSASIASVASISSIADARQNSDPLQRLRGSPSQTDVGPVASNGSADRGGSGRSSLQLTRTHSLN* # PASA_UPDATE: g4805.t1, single gene model update, valid-1, status:[pasa:asmbl_3963,status:12], valid-1 NODE_2296_length_6826_cov_38.5383 . gene 5735 6550 . + . ID=g4805;Name=g4805.t1 NODE_2296_length_6826_cov_38.5383 . mRNA 5735 6550 . + . ID=g4805.t1;Parent=g4805;Name=g4805.t1 NODE_2296_length_6826_cov_38.5383 . five_prime_UTR 5735 5830 . + . ID=g4805.t1.utr5p1;Parent=g4805.t1 NODE_2296_length_6826_cov_38.5383 . exon 5735 6018 . + . ID=g4805.t1.exon1;Parent=g4805.t1 NODE_2296_length_6826_cov_38.5383 . CDS 5831 6018 . + 0 ID=cds.g4805.t1;Parent=g4805.t1 NODE_2296_length_6826_cov_38.5383 . exon 6298 6550 . + . ID=g4805.t1.exon2;Parent=g4805.t1 NODE_2296_length_6826_cov_38.5383 . CDS 6298 6550 . + 1 ID=cds.g4805.t1;Parent=g4805.t1;3_prime_partial=true #PROT g4805.t1 g4805 MSDFVVSLMPDAPLLTAVDCEVRMAASVVVFGSIYFASFPVSKALSKTFRGLSDHQKVDWCSRVSSTIHAVVVTVVALFCLYDEWEIPNRFQHDSPAMYSMLAMSAGYLITDALVICFNFDAFGNAKLNMQTLLHHALGISGLFLVL # ORIGINAL: g12709.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 10804 12930 . + . ID=g12709;Name=g12709.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 10804 12930 . + . ID=g12709.t1;Parent=g12709;Name=g12709.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 10804 12930 . + . ID=g12709.t1.exon1;Parent=g12709.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 10804 12930 . + 0 ID=cds.g12709.t1;Parent=g12709.t1 #PROT g12709.t1 g12709 MSDAAPLRFGVVGYGRMGVRHVATLQKMGHVIAWVVEDFPQSAAQARAHLGDGVTVAASVALDNLLSEHSGPSHSVDAIVIATPTSTHKDLTLRCLRAGKAVFCEKPLSINSDDVRECADEADRMGHPLFIGYQRPWNRDVREVILRARLMGDHAMPLSIRMKTNDSPCPPEWYLRRAEPIFYDFMCHEFHVLCSLIPPSATWESATAVCVNFDDASLGARSAVVTLALVLPSTGARATCVIELHRNSTNGYDCTLDAMYPDRSFELRNRPRVAVGESRLGEHANVLASANDQSFFDKFDDAYVAEFEEFVRIVRTGDTAAARPHLAVKAMEMARAAHTSSIEGRTILNPSARCSPTDTHTSAVPLAVVGRAGCGLAAGRSLARDLFVPVACYNPTAEKEQTTDEERIKTQTESLPNLHNASSVEDAVKRASAVYFDRSVGASWDGLVAGVQATLLAGKHVLVHSSLCLAIAPHIGELAVAAASRGVALVLATPAIDRADVARLRSIVASGALGAVVHASGRMCVRVAGGSDTPLTLSQEDYSIAEMAAAVCSIALPAAASVANRTPTGITAHFAAWVESVEFNAGESIVSARRVAIVDAGAEAASARASCERSHVDGLHVEVFGTQAAAVIDGATGDVYVTHFHGPREHVHASGDATKGGRGVWARFHSAISNAGTASDAFAVDVAMHSAVLHAVASAKTLQGSSKN* # ORIGINAL: g12710.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 13423 16101 . - . ID=g12710;Name=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 13423 16101 . - . ID=g12710.t1;Parent=g12710;Name=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 16099 16101 . - . ID=g12710.t1.exon1;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 16099 16101 . - 0 ID=cds.g12710.t1;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 14743 15629 . - . ID=g12710.t1.exon2;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 14743 15629 . - 0 ID=cds.g12710.t1;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 14316 14454 . - . ID=g12710.t1.exon3;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 14316 14454 . - 1 ID=cds.g12710.t1;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 13423 13935 . - . ID=g12710.t1.exon4;Parent=g12710.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 13423 13935 . - 0 ID=cds.g12710.t1;Parent=g12710.t1 #PROT g12710.t1 g12710 MAQVTEDELASFRLEWQRELQRQRLAEAHPDIPAELDAVLAHIPVHLLPGDVSPSSALQPHVPLVGLAEKHAAAQHPGGTASAHTPTATSTRDVSAAKVVSASSATSSSLDNTSAVNLQQAEDAASFFKQAVAMERSGRVYEAIPLYKKAFQINPDIDRAYSAVDDSPSASVPNPTRPSAQNNAQSHHPHEHATQDHNRQFPANDDGEGGDSPHGGSLYTSLLDGGHVVVQPQRAPRGCHIGLLPFELLCAILRHLADELDMTSVDRAAATCRGMYVVARDASLWRVASMRVWGDGRGSLAAYGGSWRRMFLSRPRIRIDGVYISAAWYVRQGERGLDSYYQPIHRVDYYRYLRFFSDGTVLSLNTPDEPRGVVPRLRTKVRTAADATSAILEGTYWLEASEGVLVVELRKKSTSRSDAHDSTTMRGRRGQAAATTSHESAVETVFRMELGVRGAREGGCTRLEWIKYESVARYPSGSSSVNEFDLNSQFQPYRFSKVKSYMASRMPQLQPAL* # ORIGINAL: g12708.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 7136 10309 . + . ID=g12708;Name=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 7136 10309 . + . ID=g12708.t1;Parent=g12708;Name=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 7136 7945 . + . ID=g12708.t1.exon1;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 7136 7945 . + 0 ID=cds.g12708.t1;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 8354 8666 . + . ID=g12708.t1.exon2;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 8354 8666 . + 0 ID=cds.g12708.t1;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 8995 9200 . + . ID=g12708.t1.exon3;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 8995 9200 . + 2 ID=cds.g12708.t1;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 9710 9751 . + . ID=g12708.t1.exon4;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 9710 9751 . + 0 ID=cds.g12708.t1;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 9962 10309 . + . ID=g12708.t1.exon5;Parent=g12708.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 9962 10309 . + 0 ID=cds.g12708.t1;Parent=g12708.t1 #PROT g12708.t1 g12708 MVNDFGHSINSTTGWAIPAGTGEPVVSPKLDTGGYPISWFNLMENTNYTFSVRVYNRYNRSSETISTSVRTSPAIAPPPPDIISAVASYNYVTLTFSLSGENDQVKGIRIYRRTNITAATPTVINEYSLDSPFLRPVSDKPETFAYSDTSVLSETEYVYMVVAYVENQDGVKLPSNASNPWRITTSASPNGRGGGGASMVGPVVGVLFGVGGTAAIAFVAVWYFRRTKVRKAAKLAQSELLLIETLSTRPEINQLELHESCVKLVAKLGEGEFGMVHRGLATIGEEKVDVAVKTLKLNVNAVPEEILSVRSAFMSEIDLMRTVPHHPNVVAMLGIITLSSPNRVILEFCDLGDLRSYVLKHSESVNDTTLLKLACDAASGMMHLDSLGIVHRDLAARNCMMKTGAASSTTPILKIGDFGLSRSVSADSEYYRVRTRGKLPVKWATDVWSFGVVMWEMWSRGAKPYPGLENHRVMEYIRSGKRLNQPEGCPPAVFKVMEHCWRKYAETRPRWADLLHTLSALYSAALARTGTERLPPSSASTAGAGAPSRPPGSESYAEIDITTNMAYGVVDV* # ORIGINAL: g12706.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 1484 2698 . - . ID=g12706;Name=g12706.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 1484 2698 . - . ID=g12706.t1;Parent=g12706;Name=g12706.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 2659 2698 . - . ID=g12706.t1.exon1;Parent=g12706.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 2659 2698 . - 0 ID=cds.g12706.t1;Parent=g12706.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 1484 2211 . - . ID=g12706.t1.exon2;Parent=g12706.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 1484 2211 . - 2 ID=cds.g12706.t1;Parent=g12706.t1 #PROT g12706.t1 g12706 MDALRQALTKQSQDLQVKISETAANAQLLVPVGTVLAYAGTTAPSGFLMCEGQVVSRSQYNALFGIIGTAFGQGDGTSTQFVIPDLRGYFIRGRDSRTNANEMKDPDVSSRASQSPGGNTGNRVGSVQQDALGSHSHTAEEAAEHTHSFSVPPHTHAMDHKHDGVIPMGVRANAGAGDSWGTPIMLAGGGQYGLRYAQASLAGLPFSTYSASGRTGDDGAFSGSTGPAKSSISVFATGGKETRPKNVYMNYIIKT* # PASA_UPDATE: g12717.t1, single gene model update, valid-1, status:[pasa:asmbl_10130,status:3], valid-1 NODE_95_length_40921_cov_42.3262 . gene 36937 39762 . - . ID=g12717;Name=g12717.t1 NODE_95_length_40921_cov_42.3262 . mRNA 36937 39762 . - . ID=g12717.t1;Parent=g12717;Name=g12717.t1 NODE_95_length_40921_cov_42.3262 . five_prime_UTR 39692 39762 . - . ID=g12717.t1.utr5p1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 39682 39762 . - . ID=g12717.t1.exon1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 39682 39691 . - 0 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 39302 39414 . - . ID=g12717.t1.exon2;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 39302 39414 . - 2 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 39018 39072 . - . ID=g12717.t1.exon3;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 39018 39072 . - 0 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 38574 38824 . - . ID=g12717.t1.exon4;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 38574 38824 . - 2 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 38229 38449 . - . ID=g12717.t1.exon5;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 38229 38449 . - 0 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 37681 38020 . - . ID=g12717.t1.exon6;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 37681 38020 . - 1 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 37295 37476 . - . ID=g12717.t1.exon7;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 37295 37476 . - 0 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . exon 36937 37133 . - . ID=g12717.t1.exon8;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . CDS 36962 37133 . - 1 ID=cds.g12717.t1;Parent=g12717.t1 NODE_95_length_40921_cov_42.3262 . three_prime_UTR 36937 36961 . - . ID=g12717.t1.utr3p1;Parent=g12717.t1 #PROT g12717.t1 g12717 MVRITEQLLRKRAEHNEYELATLEEITLHQEDIERIEVIGSICRKLKILYLQSNLIPKIENVHRLKELEYINLALNNVKRIENLGSCESLKKLDLTINFVAELTSIESLRENIHLRELYLTGNPCSKFEGYRQYVVATLPQLKSLDGTDIERSERIVAAQEYESVKKRIIEQQTVAMAAQLAEEAAEKEKAEREKAEADSSNPPDGAALESAPDAQKVDFWHSPSPYTPQTRTAVSQHLIENVKKGQSKPNDGEKEGVSHAAAAAGPEQGGEEKFMQKNEGKWPFTLEEGTDSEGREAFVLDVACPRFLDTSMIDADVQPTSVTITMKGKVLRLQLMEEVNSDSSVAKRSQTSGHLVITMPKAKQTGKGKSHSQPQLLKPRSSSTLQSDKSGGSRKKDVTGGAVDIANIVKDGSGVGGGAAPHIKEAPREKMPSESFVDDPDVPPLM* # PASA_UPDATE: g12715.t1, single gene model update, valid-1, status:[pasa:asmbl_10136,status:12], valid-1 NODE_95_length_40921_cov_42.3262 . gene 31684 34101 . - . ID=g12715;Name=g12715.t1 NODE_95_length_40921_cov_42.3262 . mRNA 31684 34101 . - . ID=g12715.t1;Parent=g12715;Name=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 33978 34101 . - . ID=g12715.t1.exon1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 33978 34101 . - 0 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 33692 33803 . - . ID=g12715.t1.exon2;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 33692 33803 . - 2 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 33314 33486 . - . ID=g12715.t1.exon3;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 33314 33486 . - 1 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 32877 33007 . - . ID=g12715.t1.exon4;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 32877 33007 . - 2 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 32549 32665 . - . ID=g12715.t1.exon5;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 32549 32665 . - 0 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . exon 31684 31902 . - . ID=g12715.t1.exon6;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . CDS 31834 31902 . - 0 ID=cds.g12715.t1;Parent=g12715.t1 NODE_95_length_40921_cov_42.3262 . three_prime_UTR 31684 31833 . - . ID=g12715.t1.utr3p1;Parent=g12715.t1 #PROT g12715.t1 g12715 MRMIILDDYDRVSEWVANYVVTRINAFKPTAERPFVLGLPTGSTPLGTYKKLIEKHKRGDISFKHVITFNMDEYVGLPRDHPESYHSYMWNNFFKHIDIVPGNVHILDGNATNLQAECDKYEASIKAVGGIELFVGGIGPDGHIAFNEPGSSLSSRTRVKTLAYDTILANSRFFGNDITKVPKLALTVGVGTVMDAREVLVIITGAHKAFALYQAVEQGVHEDLLGDDDKSKLASNVTSAQ* # ORIGINAL: g12712.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 22983 25805 . - . ID=g12712;Name=g12712.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 22983 25805 . - . ID=g12712.t1;Parent=g12712;Name=g12712.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 22983 25805 . - . ID=g12712.t1.exon1;Parent=g12712.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 22983 25805 . - 0 ID=cds.g12712.t1;Parent=g12712.t1 #PROT g12712.t1 g12712 MMSLSRVARQPLYRMCVLPHGVSSAATLESTCLSSACIVSIADSVRIPRPACRAVAQVDVVVDSYVRRRWLHTTRTTALASASTAAHVLHVDALIADKSVPMKPPSPPQKGTAVRMDGSTLSAGPRDSPVQKNTDSACEDVQFQNRVGDSNARDGNSGVDASWPIEQIIASLRAGEYSASLLCSTVGDLVRLQRARDGVRLFDVFRRNLNSKERSFDSYMMELRCLSMTGNVRRAFDLCRCMRKHVNVNRDTYHMLISMCARKRKLLDAIGLYERMLKDGLNPNRHTLNLMISACGSVGDAGRAKFYFDEISRRGFKPDEWSFSALLYVCRAVGLGNALPQVLAHMKELGISTNPEGYNTVLNVLLDGGQISKATELFEGQERQRELQEKMENLHREEEGRRRRSSRNEVGGGLWDSSAAHPDSTHNGNGVGVFDGVHTGPHAHSSSAADVDAWGVDASAGIPAASVESFNSMIGALLRRGDIDGALRLYESMRRKRVSPTAYTFAKLIRGCNDPDRAVALLEQMRMDGVVPSPHVYASGLFILSRAGRVANAFALLEEMRERFRHEDTGGYNALLDGFRAGGHADAAMCVVEMMRCRMVKADGRTVLALVLLHARLRNDAVAAYSVYVHASHSIETLDAMLPATYDVVLDSLARSRMWSECADVASRLCGEHLVQPKTAPTAATAVRKSRPSARASAPTPLTSPSTKNADMPHSLPSEEGATAAADATWTTRTKRLCVMPSKGSLALLVEAVIRSAHSEAHVTTARRLARYVVRNVRRGAGSPLLARSPYPRLYTTPGTAISGGASARLRHRNDVLEGLPASAIDNAAHGAYALVRTEVLSTVVGGGGGLGVAGAHVTQRLSIAARVLHVFVAEGLVTSGGGEFMAGHDDGGLVDMEEREDATPAVHHVTPAAVVASGPVASVVHLAAGTRNSRGDRRN* # PASA_UPDATE: g12714.t1, single gene model update, valid-1, status:[pasa:asmbl_10132,status:12], valid-1 NODE_95_length_40921_cov_42.3262 . gene 27661 31252 . + . ID=g12714;Name=g12714.t1 NODE_95_length_40921_cov_42.3262 . mRNA 27661 31252 . + . ID=g12714.t1;Parent=g12714;Name=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 27661 27949 . + . ID=g12714.t1.exon1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 27661 27949 . + 0 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 28387 28529 . + . ID=g12714.t1.exon2;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 28387 28529 . + 2 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 28906 28963 . + . ID=g12714.t1.exon3;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 28906 28963 . + 0 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 29171 29401 . + . ID=g12714.t1.exon4;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 29171 29401 . + 2 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 29616 29704 . + . ID=g12714.t1.exon5;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 29616 29704 . + 2 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 29891 30029 . + . ID=g12714.t1.exon6;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 29891 30029 . + 0 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 30244 30370 . + . ID=g12714.t1.exon7;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 30244 30370 . + 2 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 30502 30548 . + . ID=g12714.t1.exon8;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 30502 30548 . + 1 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . exon 30925 31252 . + . ID=g12714.t1.exon9;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . CDS 30925 31133 . + 2 ID=cds.g12714.t1;Parent=g12714.t1 NODE_95_length_40921_cov_42.3262 . three_prime_UTR 31134 31252 . + . ID=g12714.t1.utr3p1;Parent=g12714.t1 #PROT g12714.t1 g12714 MIRLSYPLSEPPSPPSRRCLRIVEGTIPGDKDERVVRFVNCRIVRDGCVVHEDLWVHRGKIIDPQSRFWEVGKDADVRIDCAGLLLAPGFIDLQLNGGFGVDFSSLAAGQVELGIHTVARQLLAYGVTSFCPTLVTSEPATYQAIIPEIRKRDGSCADGAGVLGAHLEGPFISTLKYGAHKQEFVRTMQSENGTGTAMSSVLECYGNRLESVAIVTLAPELPNALGAVKGLCERGIVVSAGHSMATIDDAERAASNGLRLVTHLYNAMSPFHHRDPGLIGLLASDAVKGQIYYSIIVDGIHAHPAAVKMSYKTNPSGCVLVTDSIAAMGLQPGSYRLGEMSVTITDRAEISGTHTLAGSIATMDQCVSKFKKFTGCSIVEAIHCASLHPALCMGLSGKKGSLHFGADADIVAIDDSGDDIAVLATIVMGGIAWQKQQQQQCSS* # ORIGINAL: g12707.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 6316 7026 . + . ID=g12707;Name=g12707.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 6316 7026 . + . ID=g12707.t1;Parent=g12707;Name=g12707.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 6316 7026 . + . ID=g12707.t1.exon1;Parent=g12707.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 6316 7026 . + 0 ID=cds.g12707.t1;Parent=g12707.t1 #PROT g12707.t1 g12707 MLQVVVYINGRARSGSFRLEAGKLVLSKGSRLDIFRNADRHSVSTVCSVNSTRPTLPAILGNITDANGMVAKTQYNKTLSIQVLRNSFQDANGETLKFSLAGVTVNGLLPRTEWWSFNSTTLTFYGTPNAAAGDELGIYRVRINSTNSVGTASEEFSFELLLTVACMCNNGGGCIKFNSACDCKVGSLGFTGPTCSDSCDVASFTFGANCESNCALQCQIRDRSVLAGHRQLHVQG* # PASA_UPDATE: g12716.t1, single gene model update, valid-1, status:[pasa:asmbl_10133,status:3], valid-1 # ORIGINAL: g12716.t2 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 . gene 34643 36785 . + . ID=g12716;Name=g12716.t1 NODE_95_length_40921_cov_42.3262 . mRNA 34643 36785 . + . ID=g12716.t1;Parent=g12716;Name=g12716.t1 NODE_95_length_40921_cov_42.3262 . five_prime_UTR 34643 34892 . + . ID=g12716.t1.utr5p1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . exon 34643 34982 . + . ID=g12716.t1.exon1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . CDS 34893 34982 . + 0 ID=cds.g12716.t1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . exon 35252 35403 . + . ID=g12716.t1.exon2;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . CDS 35252 35403 . + 0 ID=cds.g12716.t1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . exon 35771 36029 . + . ID=g12716.t1.exon3;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . CDS 35771 36029 . + 1 ID=cds.g12716.t1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . exon 36234 36785 . + . ID=g12716.t1.exon4;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . CDS 36234 36320 . + 0 ID=cds.g12716.t1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . three_prime_UTR 36321 36785 . + . ID=g12716.t1.utr3p1;Parent=g12716.t1 NODE_95_length_40921_cov_42.3262 . mRNA 34893 36320 . + . ID=g12716.t2;Parent=g12716;Name=g12716.t1 NODE_95_length_40921_cov_42.3262 . exon 34893 34982 . + . ID=g12716.t2.exon1;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . CDS 34893 34982 . + 0 ID=cds.g12716.t2;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . exon 35252 35403 . + . ID=g12716.t2.exon2;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . CDS 35252 35403 . + 0 ID=cds.g12716.t2;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . exon 35771 36029 . + . ID=g12716.t2.exon3;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . CDS 35771 36029 . + 1 ID=cds.g12716.t2;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . exon 36231 36320 . + . ID=g12716.t2.exon4;Parent=g12716.t2 NODE_95_length_40921_cov_42.3262 . CDS 36231 36320 . + 0 ID=cds.g12716.t2;Parent=g12716.t2 #PROT g12716.t1 g12716 MPPSRSSIQEANDHIRALTGKLAEYESVVKAKDEEIMRLSMHCRALQEEVEAARDVIVQRNSELFRVRGKVALSDYILKCRPLIERLLVKMSRVDGASSAPLSVLTDAGGDQMAELLQHHEQSFFGGGSDTQFASVFGTEEGDVTGLNGVGMYSRSNSAEAAAIFEPQQANGTATPPMFNYQYADGGNGNGMYGN* #PROT g12716.t2 g12716 MPPSRSSIQEANDHIRALTGKLAEYESVVKAKDEEIMRLSMHCRALQEEVEAARDVIVQRNSELFRVRGKVALSDYILKCRPLIERLLVKMSRVDGASSAPLSVLTDAGGDQMAELLQHHEQSFFGGGSDTQFASVFGTEEGDVTGLNGVGMYSRSNSAEAAAIFEPQQQANGTATPPMFNYQYADGGNGNGMYGN* # ORIGINAL: g12711.t1 original gene structure, not modified by PASA NODE_95_length_40921_cov_42.3262 AUGUSTUS gene 16738 21897 . + . ID=g12711;Name=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS mRNA 16738 21897 . + . ID=g12711.t1;Parent=g12711;Name=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 16738 17977 . + . ID=g12711.t1.exon1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 16738 17977 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 18360 18544 . + . ID=g12711.t1.exon2;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 18360 18544 . + 2 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 18722 18838 . + . ID=g12711.t1.exon3;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 18722 18838 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 19034 19150 . + . ID=g12711.t1.exon4;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 19034 19150 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 19408 19546 . + . ID=g12711.t1.exon5;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 19408 19546 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 19855 19967 . + . ID=g12711.t1.exon6;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 19855 19967 . + 2 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 20128 20268 . + . ID=g12711.t1.exon7;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 20128 20268 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 20644 20739 . + . ID=g12711.t1.exon8;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 20644 20739 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 20968 21062 . + . ID=g12711.t1.exon9;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 20968 21062 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 21396 21534 . + . ID=g12711.t1.exon10;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 21396 21534 . + 1 ID=cds.g12711.t1;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS exon 21703 21897 . + . ID=g12711.t1.exon11;Parent=g12711.t1 NODE_95_length_40921_cov_42.3262 AUGUSTUS CDS 21703 21897 . + 0 ID=cds.g12711.t1;Parent=g12711.t1 #PROT g12711.t1 g12711 MSSDAPEEEFSLESAPDAQSLSQLERSDSLTADTVSKDAETSDAHRDVIDEVADSPDTDNADNAPGAHAQHEADDSGASAIGIRDYRSFSELSGSDFRGNDVSLDASANNGDSIGALVGGDNSFGLRMGSAQQYDDDVPVGMADHIREEGMSAIDLGSTMIKANDSLDMLAAPRGTSAGDDDINLDGGADGPSARREAWKLDAVQPLGDEQGAASSPSGIATGTGSSLPVESRADSMSEQQLREATLPTAGQSAIKASVKEEAATSAGFEGVGGVSVPVPEPTVAEYPRSAEADNYTDAGGEKRKPLPMSASREDLHAAQKQARPASPAVPAAASPYASTTPSVDDSGRDAHARPPSGMDHVTEGERARAVTPPSPAHAAQLALTRESHPAAAAAAIAAAEGKKASLDGLGSAVFANGEQRKSSQDAQSRMHSYWPVSAETATILSAVVAADSRDAVASQAFPRSNPGIVVETAQGDPVRELIARYFGDAEAAKRQSVQLDDITMDAKGMRELMRRGAWRSVIDLSARYLTAHGQGFDRGEDTLPVHTHKTLQMWLCRAAALMRLRMYEVVASELATFGDFDRADLFFEFYPDSYPGWTGSMVPFSLRVLHAELPIHLNMPQESLDRTYAVIETCTKVLSSLRAGRTDGMGPLDAADVTAAIALWQSRVDRLKFSVGNQLVLLKDYDLAAVLYGELLAKEPSSTPLLSGIGRMYLQLGDLKTAAAYFHKIESVGGASPHHSVLVSVNKALLLLAEGSCAKAIEVLRGALKADPGNLVIANNLSVCLLYDGNLQHAIGILENHLQNNPSQSVRENLMFNLATMFELESGRSGDRKRALIGTVASHASDGFDVECLKLAL* # PASA_UPDATE: g12713.t1, single gene model update, valid-1, status:[pasa:asmbl_10131,status:3], valid-1 NODE_95_length_40921_cov_42.3262 . gene 26287 27309 . + . ID=g12713;Name=g12713.t1 NODE_95_length_40921_cov_42.3262 . mRNA 26287 27309 . + . ID=g12713.t1;Parent=g12713;Name=g12713.t1 NODE_95_length_40921_cov_42.3262 . five_prime_UTR 26287 26367 . + . ID=g12713.t1.utr5p1;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . exon 26287 26786 . + . ID=g12713.t1.exon1;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . CDS 26368 26786 . + 0 ID=cds.g12713.t1;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . exon 26873 26937 . + . ID=g12713.t1.exon2;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . CDS 26873 26937 . + 1 ID=cds.g12713.t1;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . exon 27098 27309 . + . ID=g12713.t1.exon3;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . CDS 27098 27147 . + 2 ID=cds.g12713.t1;Parent=g12713.t1 NODE_95_length_40921_cov_42.3262 . three_prime_UTR 27148 27309 . + . ID=g12713.t1.utr3p1;Parent=g12713.t1 #PROT g12713.t1 g12713 MPLLHLVSHVLTSGVGRVLPGRYTLSAAIAMSSRPTSASERVRRSIANLSQKEKFGYKPEDDKSNMDSIHTAHIKDIHEVPMSVITRPLPSELCEPKVKSLMGAITDESARVQDVPPIDILWVQGSEGGNYYFAFGGCHRFEAHKRLGKETIRAKLVPCNEAQLKIYLGNSAPTNLK* # PASA_UPDATE: g12705.t1, single gene model update, valid-1, status:[pasa:asmbl_10135,status:12], valid-1 NODE_95_length_40921_cov_42.3262 . gene 34 316 . - . ID=g12705;Name=g12705.t1 NODE_95_length_40921_cov_42.3262 . mRNA 34 316 . - . ID=g12705.t1;Parent=g12705;Name=g12705.t1 NODE_95_length_40921_cov_42.3262 . five_prime_UTR 165 316 . - . ID=g12705.t1.utr5p1;Parent=g12705.t1 NODE_95_length_40921_cov_42.3262 . exon 34 316 . - . ID=g12705.t1.exon1;Parent=g12705.t1 NODE_95_length_40921_cov_42.3262 . CDS 34 164 . - 0 ID=cds.g12705.t1;Parent=g12705.t1;3_prime_partial=true #PROT g12705.t1 g12705 MMSSSSYVSGSGRLPAEWTLAPRYNGKVLIGNWSEDQFAPSSV # ORIGINAL: g2030.t1 original gene structure, not modified by PASA NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS gene 7216 8930 . + . ID=g2030;Name=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS mRNA 7216 8930 . + . ID=g2030.t1;Parent=g2030;Name=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 7216 7428 . + . ID=g2030.t1.exon1;Parent=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 7216 7428 . + 0 ID=cds.g2030.t1;Parent=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 7630 8628 . + . ID=g2030.t1.exon2;Parent=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 7630 8628 . + 0 ID=cds.g2030.t1;Parent=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 8766 8930 . + . ID=g2030.t1.exon3;Parent=g2030.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 8766 8930 . + 0 ID=cds.g2030.t1;Parent=g2030.t1 #PROT g2030.t1 g2030 MAFVVAFVTVLVVGSLASTHAAAGPSAVLSAKDDGFEISARAFVFNSTTTSKFFGSLLVQKSSSSDPVDIGVDLLSAQVNCRRTYSPFLSASALDEVGVASANGAPPVSSVGGTVRSLILMGRTGGILLAFRKSESGTLELLWTRDNTGLPSSISSVTPGVVEDPATGVVSLCWRIGESPQSGVVEALDLSDPENPVRLGLYPTQGIPLALAFVPRTATITRIPLVIAAECICSPGKFNGATAIDVSDPRSMRLAGSFNTGPLSVNATQYVVVVRDAIVALATHSYGSFALVDFANPASPAVLSRVFMQLPVRGGVVYCQAVDVVDGYLVVGFSIYGVAQRPGLLLYDIRNMRSPVISSPLVFSSIGIGNVRQVLRMGQRDELLAVLQDRSSLTFTNGIRPPDEGVLMFDISNRTYPILKSTVSIPSVYLMSRLTATTFAASSRTGVLSLYTIGYLCE* # ORIGINAL: g2027.t1 original gene structure, not modified by PASA NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS gene 142 591 . - . ID=g2027;Name=g2027.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS mRNA 142 591 . - . ID=g2027.t1;Parent=g2027;Name=g2027.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 142 591 . - . ID=g2027.t1.exon1;Parent=g2027.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 142 591 . - 0 ID=cds.g2027.t1;Parent=g2027.t1 #PROT g2027.t1 g2027 MYSAREPTGRRPGTMPHLRLPTTLVKWVVAFAAALITFLALWSVFVRPSSTRHNSQSSTATGALAAAAAVEHASATAGTTDSAASQLSQCPALVAARAWPKPYSILCTKIPLRDSATGRDSMGATALNAQGPSGNGFRYMDSSLSFYSI* # PASA_UPDATE: g2032.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8690,status:3], valid-1 # PASA_UPDATE: g2032.t1, single gene model update, valid-1, status:[pasa:asmbl_8689,status:3], valid-1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . gene 16100 18542 . + . ID=g2032;Name=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . mRNA 16100 18542 . + . ID=g2032.t1.1.5b6be70c;Parent=g2032;Name=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . five_prime_UTR 16100 16154 . + . ID=g2032.t1.1.5b6be70c.utr5p1;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16100 16249 . + . ID=g2032.t1.1.5b6be70c.exon1;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16155 16249 . + 0 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16502 16589 . + . ID=g2032.t1.1.5b6be70c.exon2;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16502 16589 . + 1 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16793 16866 . + . ID=g2032.t1.1.5b6be70c.exon3;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16793 16866 . + 0 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 17163 17298 . + . ID=g2032.t1.1.5b6be70c.exon4;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 17163 17298 . + 1 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 17723 18039 . + . ID=g2032.t1.1.5b6be70c.exon5;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 17723 18039 . + 0 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 18275 18542 . + . ID=g2032.t1.1.5b6be70c.exon6;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 18275 18416 . + 1 ID=cds.g2032.t1.1.5b6be70c;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . three_prime_UTR 18417 18542 . + . ID=g2032.t1.1.5b6be70c.utr3p1;Parent=g2032.t1.1.5b6be70c NODE_650_length_19584_cov_27.9835_potentialcontaminant . mRNA 16100 18542 . + . ID=g2032.t1;Parent=g2032;Name=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . five_prime_UTR 16100 16154 . + . ID=g2032.t1.utr5p1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16100 16245 . + . ID=g2032.t1.exon1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16155 16245 . + 0 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16498 16589 . + . ID=g2032.t1.exon2;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16498 16589 . + 2 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 16793 16866 . + . ID=g2032.t1.exon3;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 16793 16866 . + 0 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 17163 17298 . + . ID=g2032.t1.exon4;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 17163 17298 . + 1 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 17723 18039 . + . ID=g2032.t1.exon5;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 17723 18039 . + 0 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . exon 18275 18542 . + . ID=g2032.t1.exon6;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . CDS 18275 18416 . + 1 ID=cds.g2032.t1;Parent=g2032.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant . three_prime_UTR 18417 18542 . + . ID=g2032.t1.utr3p1;Parent=g2032.t1 #PROT g2032.t1.1.5b6be70c g2032 MLASRVRSVTLQKMSSAIVLGRSMSSVPAARRLDGRVAVVTASTEGIGYAIARRLGQEGAKVVISSRKKDNVDKVVQTLKDEGLSVTGIVCHVGKAEDRKSLIAKTVAAHGGIDILVSNAAVNPIFGSMLETTEDAWDKIFDINIKSAFFLAKEAMPHMGTGGRKGGSVVFVSSIAGFAPFEALGAYSVSKTALFGLTKALSREVGARNIRVNCIAPGIIKTKFSEALWTNKAILEKTLEDVPLNRLGSAEDCAGTVSFLASDDAAYVTGETIVTAGGMQSRL* #PROT g2032.t1 g2032 MLASRVRSVTLQKMSSAIVLGRSMSSVPAARRLDGRVAVVTASTEGIGYAIARRLGQEGAKVVISSRKKDNVDKVVQTLKDEGLSVTGIVCHVGKAEDRKSLIAKTVAAHGGIDILVSNAAVNPIFGSMLETTEDAWDKIFDINIKSAFFLAKEAMPHMGTGGRKGGSVVFVSSIAGFAPFEALGAYSVSKTALFGLTKALSREVGARNIRVNCIAPGIIKTKFSEALWTNKAILEKTLEDVPLNRLGSAEDCAGTVSFLASDDAAYVTGETIVTAGGMQSRL* # ORIGINAL: g2028.t1 original gene structure, not modified by PASA NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS gene 1054 2260 . + . ID=g2028;Name=g2028.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS mRNA 1054 2260 . + . ID=g2028.t1;Parent=g2028;Name=g2028.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 1054 1363 . + . ID=g2028.t1.exon1;Parent=g2028.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 1054 1363 . + 0 ID=cds.g2028.t1;Parent=g2028.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 1680 2260 . + . ID=g2028.t1.exon2;Parent=g2028.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 1680 2260 . + 2 ID=cds.g2028.t1;Parent=g2028.t1 #PROT g2028.t1 g2028 MEYHSQSTTRPAPTGRSPGRDAAYVTIGFLVATCLALSTWPACEATSMSIVSQENVTSLFLSGTGKKLVLDPGLNGSVLISGTDFAELLRRISALESKVASIQATKTGPDLTDMRNPFVFWNISYADRFADRGSCNESLRLHCYCPSAYRRFEPNRFIVTDVYEDLAGEPYVLFSASAAGIDPVTMRMIQPALISGSSTYFFSQFASGWSACDYNGDMYPEGNCATLYSLPPYSGVMMHYSQCADYALAIDIDKPWLDSSWGPHVDTDQSAGWPGGTTDGTRGTRVNRITRYIRAK* # ORIGINAL: g2029.t1 original gene structure, not modified by PASA NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS gene 3922 5054 . + . ID=g2029;Name=g2029.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS mRNA 3922 5054 . + . ID=g2029.t1;Parent=g2029;Name=g2029.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 3922 4204 . + . ID=g2029.t1.exon1;Parent=g2029.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 3922 4204 . + 0 ID=cds.g2029.t1;Parent=g2029.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 4435 5054 . + . ID=g2029.t1.exon2;Parent=g2029.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 4435 5054 . + 2 ID=cds.g2029.t1;Parent=g2029.t1 #PROT g2029.t1 g2029 MLLRETVGSAILGLLLYTILQCTPIAAAAAERAVISVASTNESATVRVSGTGKLLVLDAGETGTIWFNSSIDGQAVKALLKKIDDLENQVKALQGSVTTTPCGLPHPEFGYVVYNSAKNTNSSAVGLANPLVFWNISYADRFTTRGSCDVSLKSSCYCPTTYLRHAPNGFLVTDVFEDIAGNEFIAISASAQALNSTTMRMVQPKLVSGSSFIYTVHFAGGWSSFDFDNDDYPGGNCALSYAATQPYGGCLVYCLSADYDEFADSLLGPHFADLNRFPGAVSDGTRYSRVNRITRFIRRL* # ORIGINAL: g2031.t1 original gene structure, not modified by PASA NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS gene 13973 14419 . - . ID=g2031;Name=g2031.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS mRNA 13973 14419 . - . ID=g2031.t1;Parent=g2031;Name=g2031.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 14285 14419 . - . ID=g2031.t1.exon1;Parent=g2031.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 14285 14419 . - 0 ID=cds.g2031.t1;Parent=g2031.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS exon 13973 14149 . - . ID=g2031.t1.exon2;Parent=g2031.t1 NODE_650_length_19584_cov_27.9835_potentialcontaminant AUGUSTUS CDS 13973 14149 . - 0 ID=cds.g2031.t1;Parent=g2031.t1 #PROT g2031.t1 g2031 MLCRLVLFIVLFGQLLGFAAYADEKKHTDTKKAAVATNGKKVEIQIMKTLSRRGGMDRMIADFEPRPAAAESTTVSKHVLGSSRSQKLSTWKPSDDVTRLLIV* # ORIGINAL: g12235.t1 original gene structure, not modified by PASA NODE_576_length_20891_cov_40.1764 AUGUSTUS gene 10133 14041 . - . ID=g12235;Name=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS mRNA 10133 14041 . - . ID=g12235.t1;Parent=g12235;Name=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 13896 14041 . - . ID=g12235.t1.exon1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 13896 14041 . - 0 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 13666 13715 . - . ID=g12235.t1.exon2;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 13666 13715 . - 1 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 13059 13177 . - . ID=g12235.t1.exon3;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 13059 13177 . - 2 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 12700 12807 . - . ID=g12235.t1.exon4;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 12700 12807 . - 0 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 11983 12488 . - . ID=g12235.t1.exon5;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 11983 12488 . - 0 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 11614 11779 . - . ID=g12235.t1.exon6;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 11614 11779 . - 1 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 11161 11349 . - . ID=g12235.t1.exon7;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 11161 11349 . - 0 ID=cds.g12235.t1;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 10133 10888 . - . ID=g12235.t1.exon8;Parent=g12235.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 10133 10888 . - 0 ID=cds.g12235.t1;Parent=g12235.t1 #PROT g12235.t1 g12235 MIHSEYRYVVVPSVIGIVIKISAKLLSHWSVFLVKLVSHWLFVGGGVSRLVLHLALGCRGGSFLHAHIDDDAARFFAAARELNTVATTVLTAAESSPSYVEHITRVYEAMSDLNDQRAPDKELWLRHIAAVDLQQSKILNEMVGSARVVLESLNSPASLYDLTWKATATGAHVPGSVAMTPVDDTRAATSVAEAMQVKRAGILRDGVHVTDDSGGNVFFNGSNGINQLIAMCEETPCKKNLFTRMCERGTVQMDAWMLETLKTQRKAMGSLHVPDALFYGTHNSYNDKADMYGLGDWTLNLLMEIASKNKWSFVWAQQAFTMTDQLAMGVRMVDLNPVWFSGKMRLCHCGTEFKVVDDVIELVEKALNRTFNFTSKDLGCSPFDRTFDSGLAELLQFIERPDNANDVFLIRINDKGPFADWGRIAMIQDSIEKAFGDLLYRPIDRPDSATWHTIGELSKMGRRVIAFGDRIANGAIHDMSLRPHYPLNDMTYYTPYPKCGAVKPGNFSMFGGESQVVGPVYDGPADDGLIVRENIKDMVDCGLTVPEMDLASPTLIRAGLWAWAEGHPTAAATSLGNEENETLCAALAIGGEQPTTISGRWYVLECTALLPHACREADTGHWTVSAVPGTHAAGVDSCASLAPEATFGHPRTGFENRRLRDIAVSTGAGLFVWINFSVE* # ORIGINAL: g12232.t1 original gene structure, not modified by PASA NODE_576_length_20891_cov_40.1764 AUGUSTUS gene 327 734 . - . ID=g12232;Name=g12232.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS mRNA 327 734 . - . ID=g12232.t1;Parent=g12232;Name=g12232.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 327 734 . - . ID=g12232.t1.exon1;Parent=g12232.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 327 734 . - 0 ID=cds.g12232.t1;Parent=g12232.t1 #PROT g12232.t1 g12232 MSGLRMHAFSLSQLAQALTQPNLRVRQAPLTRLNYEITQVLAAHRFIDSFEVVPEKFGKIIIRGHVPTVKILSRPGQRVFFDYETLIGKRDTFRYLELRSSTALTILRTPLGIRSLAAAKYLRTGGEPLLLAKLD* # ORIGINAL: g12234.t1 original gene structure, not modified by PASA NODE_576_length_20891_cov_40.1764 AUGUSTUS gene 8395 9460 . + . ID=g12234;Name=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS mRNA 8395 9460 . + . ID=g12234.t1;Parent=g12234;Name=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 8395 8617 . + . ID=g12234.t1.exon1;Parent=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 8395 8617 . + 0 ID=cds.g12234.t1;Parent=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 9069 9226 . + . ID=g12234.t1.exon2;Parent=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 9069 9226 . + 2 ID=cds.g12234.t1;Parent=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 9371 9460 . + . ID=g12234.t1.exon3;Parent=g12234.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 9371 9460 . + 0 ID=cds.g12234.t1;Parent=g12234.t1 #PROT g12234.t1 g12234 MLISSSPSQHNQQPTNNNNNRPTTTDQQQQQQQQERVSMAPEIASFCEHFFIDIPNLSTSEAVELREKAWLPNAVDILGLAITKLESLPPQATDEQISGLLDALSKEAGVQPKQLMLLMRYALTGTKVGTGIAQTIATISPSLSSKRLAACVSANA* # ORIGINAL: g12233.t1 original gene structure, not modified by PASA NODE_576_length_20891_cov_40.1764 AUGUSTUS gene 1096 7677 . + . ID=g12233;Name=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS mRNA 1096 7677 . + . ID=g12233.t1;Parent=g12233;Name=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 1096 1135 . + . ID=g12233.t1.exon1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 1096 1135 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 1271 1404 . + . ID=g12233.t1.exon2;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 1271 1404 . + 2 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 1591 1680 . + . ID=g12233.t1.exon3;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 1591 1680 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 1926 2756 . + . ID=g12233.t1.exon4;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 1926 2756 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 3035 3229 . + . ID=g12233.t1.exon5;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 3035 3229 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 3564 3718 . + . ID=g12233.t1.exon6;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 3564 3718 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 4060 4188 . + . ID=g12233.t1.exon7;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 4060 4188 . + 1 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 4410 4582 . + . ID=g12233.t1.exon8;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 4410 4582 . + 1 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 4931 5079 . + . ID=g12233.t1.exon9;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 4931 5079 . + 2 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 5241 5313 . + . ID=g12233.t1.exon10;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 5241 5313 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 5463 5500 . + . ID=g12233.t1.exon11;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 5463 5500 . + 2 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 5983 6138 . + . ID=g12233.t1.exon12;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 5983 6138 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 6443 6613 . + . ID=g12233.t1.exon13;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 6443 6613 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 6848 6997 . + . ID=g12233.t1.exon14;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 6848 6997 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 7483 7677 . + . ID=g12233.t1.exon15;Parent=g12233.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 7483 7677 . + 0 ID=cds.g12233.t1;Parent=g12233.t1 #PROT g12233.t1 g12233 MGRLIGTAVLLSFALFSAVYCDYVGPALPQGARVAYGGILNSYTTPVTLDTEFRKAIHFGLRHGYDFGSICVGKEHRHDPLIFAPRSIELKFTQNGRTQLETERVMHSSGGAPKLVRRRVAMGFTYDFHALWDCDRGHVAVHRMSVTRDNAGRMAMFEHSAQLVTRNPNAELTPLGVLGVLGTSETDFDNGTAVLHSVGRSGTCPKASLVAIFDGNVSSPSSWPQRTLRTEYAPFANPMCDMDRFGTPTRTQSLHGHRPPRLPTCGNPAPDADNVSTGGVVTADAVAGAVQDKAGNFFRVLSYNIWNYNGKPNEYYRRVKMIGRVCRSSRADVIAFQEVRYDVNRGGAMGPSQVAHLVDQLPGYQYAFQPAMSYPEGDEYSRVEEGVAVFSRHPIVSRDYILLPRNENDGIDFHQRILFHVTVDAGMAGRVHVFVSHFSLSEQARDRAVVEIAKRMREVALPGETWLFMGDLNALPDTNAMRFLDGKVDFAGVSLSGEMLDVWTALHPEPQPPIDHRNAAESQDRTAGLTFSTLDPHLAKRIDYIFVHLPVNADAQWSLAGCRTIGDIGRDGVYPSDHLGVIANMAGVTRVRFAPSPTGHLHLGGLRTALYNYLFARKTKGKAILRIEDTDQTRLVPGSAEALESMLEWAGMTFDETPKRPGAFGPYVQTGAAYRCYCSPERLDSLRGHQGQKGVPMMYDKTCRSVSREPAPGERFTVRLKIPMGNVSFKDEVHGHVTFSNAQMDDQILLKSDGFPTYHLANVVDDHLMGITHVIRGEEWMTSVPKHILLYEGFGWRHPSFAHLPLLLNEDGTKLSKRQGDVFVEQYKFNLSEVNKAGAIVNRTKLRWMNKQHMTRAFASKGASAPPDAASVIRERCIDALGSTVVAKFGKK* # ORIGINAL: g12236.t1 original gene structure, not modified by PASA NODE_576_length_20891_cov_40.1764 AUGUSTUS gene 15649 20687 . + . ID=g12236;Name=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS mRNA 15649 20687 . + . ID=g12236.t1;Parent=g12236;Name=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 15649 15817 . + . ID=g12236.t1.exon1;Parent=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 15649 15817 . + 0 ID=cds.g12236.t1;Parent=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 16075 18897 . + . ID=g12236.t1.exon2;Parent=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 16075 18897 . + 2 ID=cds.g12236.t1;Parent=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS exon 19273 20687 . + . ID=g12236.t1.exon3;Parent=g12236.t1 NODE_576_length_20891_cov_40.1764 AUGUSTUS CDS 19273 20687 . + 2 ID=cds.g12236.t1;Parent=g12236.t1 #PROT g12236.t1 g12236 MSPQAHDRNASRLSSPSIAPHCLSLVITVLCVVVLLGTSADGLVVVPGCSAISFSRVCSADALATPTGRRTDCEVVEGNVNVSAYGVNFAAIFANVKLIRGSFFMTNATPTNITLPSVVAVYGSITVSNNANLLQLSMPLLCYLGGDLMIEFNPRVQQVLMPQLVYLSGSLLLGGLPLLTSIDGITLKLTYITGRIALPLTGISTVHFPVLQRCGSLILDSGSIRTLSAADSFPLLQTIDGVLSIALNSQLVDIGGFPSLKLVSGDILIELNPALQSIRGFDGLVLCGGGLSISGNVALTTVANFASLNSIAGSLVFESNVAIVRVTCFGAVVTVRGSVHVKYNSALVEWGSISSLVTVHNNVQIERNSALLTIGSFPLLETIGGDFLIRLNPLLTNLPAAKSLKQISGSLGFLLHPSAISMGSFDSLTSIGDDLIIADNRLLQSVAGFPSLTTVGRDIHLQGNGRLLDFDFPRLSRVDGSLMIVNNNAISRLTGYDALRTVGKDIFVVANAVLTAVCVHDSVDSVGGSIIVSQNNLLVSLCGAGDLVASTVNNDGPTTIGRALMVLSNPSLREIGPFVRTETIGSLLPINAGEAAVELFNNPSLPAPPLLPNLTRAGGSISVSQGANIDLSAAFASLSIIDSGGGISIVSNTNVSGVLPFPRLGALMGSIAIQSNVFVGNLTGFDTLSQIDGNVTISDNTFAPLSSADIAPLLGIVSGSVVVQGNSGLVSIVSFSAVNRIEKGMSIEGNANLVSLPSFDSLAFVGGLRLVSNPSLAADCSGLTIGGQQSSNASGSMPTQMLSALTIVAGDVVVLNMSSLECFVLPILAEIKGSLRLLSNARLSIAGIGLRVMRVRGDLVIVGNTMLSDVGFEDLVTVDGSVSITDNPALSTLTGFKSLTSIGGYLQFASNYALQSITGLATLSAVGGDVLVQGTFAIDIYKNTKLASLLGLKQIATVGGNVRIAFNDNLCPYDVQLPRLADAGSVVVNNTGASGGCACYGQRQTTAEGLATYRDRNCTVISGTLEITGSELTSLSELRNVVKFTGTLLINNASGLTSLDGLKSLESIDTFVLKDSPNLVTLDGVHRLQKILTSLSIIDMPALADISALTAVGSAGFQQLQMVVRNCPSLTTLPVAGLIDVNGLEISGMAALSSLSFDNLRSAGAISVSSCGMLQNITFPILPQMSSLTVTNNTVLTVLHVPSANLVRNSVTLSGNPLLQSIDMGLVTSIGGSLTVSDTLFLTTLSLSQLGVRRRASANNPAFDSLTSVGQNLVLSNNAALVALGGLYRVTFVGHNLIVSSCPSLISLNGIGSLNTVGGTVTVTDCAQIRNATIPALRTVGDSLVLSLLASMKSCDMPLLRSLQGALVVDNCTSIVTLDGFAALQSVAVSTTSPLSPDKGVLIRRNPKLTTIAAFANLVSVDGVFQASDCPLLVSIVKLYSLVSVGAIRLSSTLLTNFDAFAAVRNVT* # ORIGINAL: g5931.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 41303 42004 . - . ID=g5931;Name=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 41303 42004 . - . ID=g5931.t1;Parent=g5931;Name=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 41937 42004 . - . ID=g5931.t1.exon1;Parent=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 41937 42004 . - 0 ID=cds.g5931.t1;Parent=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 41708 41776 . - . ID=g5931.t1.exon2;Parent=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 41708 41776 . - 1 ID=cds.g5931.t1;Parent=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 41303 41498 . - . ID=g5931.t1.exon3;Parent=g5931.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 41303 41498 . - 1 ID=cds.g5931.t1;Parent=g5931.t1 #PROT g5931.t1 g5931 MFGLVGAAARLAVRAVSAVSVPSASVAIQSASRSVFSGGLFGWAARPIAPSMESAFGPAGQVRCFTFGREYQPHTRRRKMKFGFLSRMKTHTGRRILENRRKKGRKFLSH* # PASA_UPDATE: g5924.t1, single gene model update, valid-1, status:[pasa:asmbl_8930,status:3], valid-1 NODE_69_length_45303_cov_42.8472 . gene 5290 10431 . - . ID=g5924;Name=g5924.t1 NODE_69_length_45303_cov_42.8472 . mRNA 5290 10431 . - . ID=g5924.t1;Parent=g5924;Name=g5924.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 10248 10431 . - . ID=g5924.t1.utr5p1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 9530 10431 . - . ID=g5924.t1.exon1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 9530 10247 . - 0 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 8923 9104 . - . ID=g5924.t1.exon2;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 8923 9104 . - 2 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 8423 8800 . - . ID=g5924.t1.exon3;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 8423 8800 . - 0 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 7914 8294 . - . ID=g5924.t1.exon4;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 7914 8294 . - 0 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 6843 7812 . - . ID=g5924.t1.exon5;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 6843 7812 . - 0 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 6542 6597 . - . ID=g5924.t1.exon6;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 6542 6597 . - 2 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . exon 5290 6408 . - . ID=g5924.t1.exon7;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . CDS 5581 6408 . - 0 ID=cds.g5924.t1;Parent=g5924.t1 NODE_69_length_45303_cov_42.8472 . three_prime_UTR 5290 5580 . - . ID=g5924.t1.utr3p1;Parent=g5924.t1 #PROT g5924.t1 g5924 MKRLSAGAAAIGSNGGASASMVADTRKDGLLKSPAPLHRQRSGSPTLDIPRLPSSKSSDDLHVSKNVGTSLGAMGKADRRVISATELGRGGSPTTSPLASPRGVRLRVDTAPPFGAGSAPPSVHSSASSLHSTGEETVKRERRVSDDCIDVGKLSAGIGSRERRRSLPASRRRELDVGTGGGTHVRRSSVEVAVPVEKLAARDNTGGGSHVRRSSAELAVPLDKLLNPREDWVRPWRKQGVLHRVSGVDVFELLSHELFSEGDSHVSEAAQKFREWIRLEFENRNRDFEKEISELKHQLDALHRPAGNTGLTAAFDRVNSLLVRQSNLEAELLRTRCQCEEFAAKLGKFAASIAAWSERAPQGRVTLVYTDIQGSTGLWESCPEDMSRALSTHDAILRRLLAEIGGYEVKTVGDAFMVCFQEALPAVKWCMRAQIELLSADWPGVLHGQSDSQLLVLPTGEPLFRGLRVRMGVHCGVPSMVHQNPISGRTDYFGPFVNRAARVESLAKGGQVLLSDAVLAEIEPDLKAIGSPVVVDLGEHALKGLDTRQRIYQILPKEIAGRTFPPLQAIVDVDKDSTMSKELPGPSGRVTLVYCRVEGAEDLWSANFAVTKHAMCVHDNTLRACTEKLGGYEVRSEACTWMAAFSSSRDAAQFCAEVHRSMLDAEWPEALLDLPQACVVFGETCAVDVKADSLPRATHRGLRLKVAMHTGHPTCVEEAASRRTQYIGPDASLVMHVAGMARGGQTLLSEHAFNSYRNEIGRIGANGADGEAGDSTLCPVDDSGISTVAIGDHYLRGIDGTVSLYELTSNRLPHRQFAPPDAQTSAADETGGPQWAMAQLHELQAANDRLVGRLQRIARQSEDASGEAMVLRKALDDMRKAQDTDPASLNLAYEQIELFRREHDGLRKAVADALLRNRTLTTKMDDFDSQIFTMNAKVEHERARRMAAQAVYARARAAIASMAQCDADACSTDDNEWRTLPLPSLSRESSVASESTATPSVYSGSRGPLVVSRSDSAPSEQDLALATLAMETDAIADLVTHRKQYVAALRERLRNAEEDRAALSRAVGSLEARVSEGDGLHAELVDTISALSAEVGMLRADADTLRAQLSAAVAASPATHSHRVPAGAAVGAGASAALDAAEKESERRRAMMARVESLVRHFEGKARGSV* # ORIGINAL: g5921.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 232 394 . + . ID=g5921;Name=g5921.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 232 394 . + . ID=g5921.t1;Parent=g5921;Name=g5921.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 232 394 . + . ID=g5921.t1.exon1;Parent=g5921.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 232 394 . + 1 ID=cds.g5921.t1;Parent=g5921.t1 #PROT g5921.t1 g5921 KGASTTAARPQIPCPVRQRLFAWPDAPYYINSTGGGEARIVTPDDCRLHLHAN* # ORIGINAL: g5928.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 19294 32094 . - . ID=g5928;Name=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 19294 32094 . - . ID=g5928.t1;Parent=g5928;Name=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 31920 32094 . - . ID=g5928.t1.exon1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 31920 32094 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 31388 31725 . - . ID=g5928.t1.exon2;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 31388 31725 . - 2 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 27161 31263 . - . ID=g5928.t1.exon3;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 27161 31263 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 24723 27021 . - . ID=g5928.t1.exon4;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 24723 27021 . - 1 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 24468 24587 . - . ID=g5928.t1.exon5;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 24468 24587 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 24172 24300 . - . ID=g5928.t1.exon6;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 24172 24300 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 20862 23912 . - . ID=g5928.t1.exon7;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 20862 23912 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 20205 20681 . - . ID=g5928.t1.exon8;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 20205 20681 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 19294 20016 . - . ID=g5928.t1.exon9;Parent=g5928.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 19294 20016 . - 0 ID=cds.g5928.t1;Parent=g5928.t1 #PROT g5928.t1 g5928 MFEKIVTELLNRYLSDYVCDLNAEQLRLGIWGGNVVFRNLKLREDALAGLDLPIAVKRGYIGQLTVQIPWKRLWSDPIVVDVDRLFLVAVPDVNRSYDAGAADASQQSAKEKRAHEYEDAREAKARVDAGEDASQKNTSFVEKLVTKMIDNIQVSVRNVHVRYEDTLSSPKHPFALGVTLKAMSVQSTDGEWRPFFITGASPVTHKLGSILCLGAYLNSDTEMLLDVPFDRFEETMLSLIGECDRPVAGNKYLMKPATAVTHITLNRSPLEIPDVPKLSIGLSVDRISALLNLAQYRDVTCAADLFSRQVLNEPFRRFRPSVPLLGNEDEWWHYACKSVMVDVHRRHEAWSWKRMKKRRETRLTYLRTYKSWASEGRPKTGVSRESVAAMDRDLTIEDILLYRQLAEAQMAEREMAGGRSSSDGGAEGGGDEKKALDEGAHPVGWKDWVTSWVWSTDSYSPTSAARAHRPSGRGIAMSDQQRKELYAAIDYDDKVPPGAELAGLPPNYVAQAVTARIGTFSISLFDNTSGDGPALLVAGMEVVSSTFQRRPLSEGFDVEVDVQNAGMTNESLRQCLFPHILRPLKRVPLLLGDDGPMAGYDNATDNLAVFNVRFELNPINHSADSMLNMKMQPFDVTYSKTTIERLVAFFTVPQDVHLDSLATAARKGIEELKVQTRAGLEYAILTHKTLLLTVDFAAPRIIVAETSTRSSSTEEVAPDENVMLLVVDLGRLQMTSDIAPVDPRRIQQVERMIDLMYDRFDLTLTDVHVLLGSAKELKMAAMKDADIVDLDRSADVGLQQRGLNRYSLALGKDVPSSLRLLEDVSMNLRVKLSVQMYNPDLARFIIEGTLPQIRLNVSDRSYRGLLRLSTALPDTEPARSTAAVEAKWDKDRPASVIPHPSRGHGKAHTVLSAQTHDTNARGLSSESISSLSSASSDTLSSVSSHVFGGCVGRKVGSPPPTLDEIVEDDEGIRADGKSAAMRTPDVAKKEDDAMAGLERQASAVLTPPITPRDGLGIEPAGPATTRSAADDEKSHVPVRPEDENKSADEEGKSCRRRRLRVTIPDKASSIEGSDAQTIDDHMHRDPSVNAADATDTEDMAAGADGEHGVIVQPRVRAPSWDARSGRGTTEGGESVYFSAVGDYDDDIANDDTSHSPSPPSKPAYLQVQVQLDFEIGEVSILVSRWPDTVRDPSPVVSLTIRALGVNVVKRAYDMDVDAKLDSLLLLDLIKDRSAGTVLLTSSMDVAVASVHRDHPNTDSWMREGILSHDHSDDKHASDTTEANVKFFAPASVRDRLVQVHVTLLDVEAPEVREIAPNAESPLSIDAKFGEIYAIVDEVSFASILDYVVTDLFSEGSADIAAAAAANRRASVGQSNKHKHHQNHKEATASHRGSVDVPANRANSAGNSHHRSRKSKVKFSSTLFVSAALGRVGVLLRGKRRDVARARIEDFTGSVRIGKRKTEVIASLGAVAVVDMTGQGELYKTIVSASGGRVVDLRFVQYDRPAASLLQTSPAGAKPRRHDMSVNMRTHGLQVFLLKRFVLDVLEFADDISTSFSVVRAEKLFAARTDSSGDVENGTPNEGAGPTTTSATPSTSAVLMRIKLDIDIRAPTCIVPRSSRSREVLVVDLGRVRIFSQFPDPHSEQLGAAFSQARLAVCEMGTDTTRPPRVEHMILDGFDARAIVKRSLNQHPSAEGSSEVTISVQFEGAELALNVANTDIILITQIIGPAGNLLEDTRVRTAGDRSVAGIDNVAPGITVAAAESQAASTVASIAHLRQDTNSASASAPTATPVSAPAIPYKVSVKLQKFALLLSSGPAPVPEGPAIIAREASISGLREMLPDARRLHHAEMPAGAFAFKLSDDAPGVHSVPVRMIDGPRDYAPFCSLSTEGISVVFGVVEGVFDGGMYLSRLLIEDIRPHTQSKFRRLVWNETPSRIRDQRRRKHSAPAMNSQIDTMEAPAPSQCPYVDASVGTESLHNASSLADGSTTGANPDSDAFAVSLKSSPDSYFVSVELCHPRIMINTDFVVACAVFIQPVLAALATKDQPSQAAKSAAASAAAAKRKSAGKDPQRRRRSGSGRSRTGSSADGTQGTADAKPVSSSSWQIHVALNSPEIVIIGDATDSNTHALSMRMDFRASCSSSYGQQNVDMSVARLSIASYITSNRDGSTMCMLEPCAVRGWFKSYPAPMGGGVYVDPLRMTLSYLDVKTILVIVNSVTEGISLATAISASDEAIATAQLAVPVDPPLHPRSLNDDVWYIDEEEEEASTMEAAAFFGSVLGRYGLEQQGDAPDEPTASNADEGSGEKFEFNMDEIEIKVINNCSASWVPVISLRLSVTGRVTDWSGTLRGEGCASIVASYYNELMSAWEPLIEPIADDNGVRVPWSLSGEVTTKKDSNGSILSFSALEAERRLEVTLTHQFLTSMKKTLDCWSQDYATDRRIVHRREPFYPFHIRNHTGLDAEFALTAEVDDGSRMVNLPPGQTLPLKFCNLTKVARSPRSNGSTGGVVASYIGGSKAHEGGEITVKFRGWDPIENIRVDKVGLSVINLTPPRKGVTMRLVVDVELSNGVKIATLRSSLMVENATGLPMDIAYEIPSDSHGRPEYLDTVPPGQRYAVPLLVAYHALLRVRPAGLAYVWSNRPFSWMGIGLGSMKDVVPCFPDVKANHVPGQPSPRPFMLQAHIRADRMARSQPFEDLVPYHTITLYPPIVIRNLLPRDVRFCIIDGETGTRYPTPRTLGPGDSVPMYEVNLEHELCMSVELIGVGETPKRPLVNSPSGRNLGTTLRFPATHNNSELRLGLENCPIKGSGGARSVTIFCPYWFVNRTGLPLEFKEEGRDEDVHVRPRHTLIEAKSGLASGVSVEGEMELFSFSADMHLLGRPKACARVAQCPWGYGFNVDAVGSAGVLSIEGTMGPVGRGGLRRQHELSVTISFAAHRLTKVVMFRPRFLFVNGTADPVEIAPSTSDGEPNMEEIVHVKPGKSVPFYFPGACQRTAHLRRIGAVTTCWTSAFAIESPGSTALRTVIPPNGTEERRRVVAMRVEVTIEDASVVITVRAGTTVEPVRIENRCVRQAVRFRQTGCHETHTLAPGMAFPYVYDSPTGARQIAWTVLDSDVGEDIVDMDQMEVSSITHDTLPIWAVSFPDGPTRVLLFTDNAQIVSHIEETFGMSMREQYQRRSVGECVRTWARGRLAGLGLSIVGAQPMEIIYLTMENVSLDYVVSDQNAKTDLYIGQLQIDNQLKLTHFPTLLAASPMPSSTAADLAEKESQQNESQPHLQASRVAPPFARIVVVRAQGLASHADTVDYIRYVSALVMPFDVKLEETLVLRLLEFSGVWQMGGGDDDASGNEEDADAAELRSQFKRAQQSLTKPITADELVGTEKAVYIELMELHPLKINATFRLELASTDVESDPSYSHAIRREVQHDSPVKAVIRSIGLTVSDIDGAPIRLNALYINNVYGTRQDILDRMGRHYMDHLLGEVLKVLGCIDILGNPVGIVTSLGTGVRDFFYEPWQVALSGEGDFGESLSKGAKSLVTHTAQGTVGAMSRFTKSIGKGMAAITMDNKYQEKRREQLSEVPHDFAEGLARGGKRFVRGIAGGVTGLIKMPVQGAQSDGVEGFFKGVGRGLVGVVVKPIGGLVDLATGTLEGVLSMVHMLGTVERKRCPRFIAVDKMIRPYQRHESVGAFVLARVHDGAFKGDTYVGHCEYETPHGDRRWIYFTDERVMLLAEDRVGGKMSVEWQLPFAMMISHEKKGYTLVFEGRFQTLLKTYARRKVVANPLGQQNPERTMAWMVQKYNEAWDMWSRKG* # PASA_UPDATE: g5929.t1, single gene model update, valid-1, status:[pasa:asmbl_8932,status:3], valid-1 NODE_69_length_45303_cov_42.8472 . gene 33147 37331 . - . ID=g5929;Name=g5929.t1 NODE_69_length_45303_cov_42.8472 . mRNA 33147 37331 . - . ID=g5929.t1;Parent=g5929;Name=g5929.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 37141 37331 . - . ID=g5929.t1.utr5p1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 37003 37331 . - . ID=g5929.t1.exon1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 37003 37140 . - 0 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 35901 36732 . - . ID=g5929.t1.exon2;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 35901 36732 . - 0 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 35502 35720 . - . ID=g5929.t1.exon3;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 35502 35720 . - 2 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 35081 35275 . - . ID=g5929.t1.exon4;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 35081 35275 . - 2 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 34530 34727 . - . ID=g5929.t1.exon5;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 34530 34727 . - 2 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . exon 33147 34266 . - . ID=g5929.t1.exon6;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . CDS 33485 34266 . - 2 ID=cds.g5929.t1;Parent=g5929.t1 NODE_69_length_45303_cov_42.8472 . three_prime_UTR 33147 33484 . - . ID=g5929.t1.utr3p1;Parent=g5929.t1 #PROT g5929.t1 g5929 MGRSIFCAAVVLATFFCAVASAAAPAPVSVKVTGPSRTKEGIDYTWTAVVSNAPANVLLTYSWSFGDKALAGRVNDSSVRHRFTSAGTYSVTVVVQNTLATDTPVRTSSIVVVSVDNSPPVISQILTRISSAKGLVPLQTAVDVAQNVFFDAMASDSSGQELKYVWSFGDCTQNIEGKASVVHQFHFPGVFTVTLQVWDSNGGYAMKYDQVTIACKPEYTNETTDDFRYRNNGNCNLYAKCTKVGPGNYTCLCESGFRGDGFTCERVFNPCDIGGAGYLECIAPTAGSKTCTPESIEDGMYTGGYLCGTDCREGFVYTGGRCEARTNPCDDPRSSGYMRCATLGQSNLCIPETVQIGDGLIEALFTGGVQCGTQCAAGFETVESRSTFGVTRRYCLLIRNPCATGQTGRQNCTNLGFSSCQPEITPASASTPLPLYTGAYQCSNTAGCLPGYTQTASGSCLRVLNPCLDGNPGKAVCSGSGKTCLPRFTLNQNVTTFDGKYDCGTCTAGYVEERISEGSSLQQPGCRPNDSPCKANSGGTSDCKSKGLTCFAILTDSASQLFQGTYECSVGACSSGFTTVTHSVTNELSCVPTQSSDNTAAIVGGVVGGVGGACLLGAVFAIFMFRRRRTQMEKEKAATKDQKEEWEQMDKAMREGVVHPLYDPSVGDRMWSNPFADRTREESAAAAPQPAKPVDPEMEETRRLRAAAPQRTYEEINPTVSMRGMPEVAAMSPEELMQLENPLYIPEREGIFTNPMARGVPGRASKAAPKVALPKGTVRGGPDDTDV* # ORIGINAL: g5922.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 1536 3451 . + . ID=g5922;Name=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 1536 3451 . + . ID=g5922.t1;Parent=g5922;Name=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 1536 2223 . + . ID=g5922.t1.exon1;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 1536 2223 . + 0 ID=cds.g5922.t1;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 2356 2467 . + . ID=g5922.t1.exon2;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 2356 2467 . + 2 ID=cds.g5922.t1;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 2877 2967 . + . ID=g5922.t1.exon3;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 2877 2967 . + 1 ID=cds.g5922.t1;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 3059 3451 . + . ID=g5922.t1.exon4;Parent=g5922.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 3059 3451 . + 0 ID=cds.g5922.t1;Parent=g5922.t1 #PROT g5922.t1 g5922 MRPDGAAQRPHSVVAVFLVGLSAGGVLIDTDRKGQSFRDLCKAVARKLKLSTCELVDKNGDILADTDAVKKEEILFARSVSLGSNASATASTTNRSEAGVAANSGHGTSASLTTSSRCGGTLVAVFARHGKKTAVAGMGHLYDISQCPTLRELAVRVSSDLMISPIKLTAADGTNAPVSASQWASVGQPNSIRIMFATEDVSLVSDAKILASKSEPGKKIPWGPRAPFVGSVPYLVPDTTRKVARMCEENGGIFRMSIMGVDWVIVSDPEIIKEIEEKHEIYAKISRDGTVYESFAEKKAAGEAIPKVTLYFGCRSPADDFIYGDALNAYLSNGVLHALRLAFSRAESLGHSRNYVQDLMAADANAIRLALSTEGGRVMVCGSARRMGADVWATLARIISESAESVDGAEFLGKLRADGRYLEDIWG* # PASA_UPDATE: g5932.t1, single gene model update, valid-1, status:[pasa:asmbl_8934,status:12], valid-1 NODE_69_length_45303_cov_42.8472 . gene 42434 43413 . - . ID=g5932;Name=g5932.t1 NODE_69_length_45303_cov_42.8472 . mRNA 42434 43413 . - . ID=g5932.t1;Parent=g5932;Name=g5932.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 43332 43413 . - . ID=g5932.t1.utr5p1;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . exon 43199 43413 . - . ID=g5932.t1.exon1;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . CDS 43199 43331 . - 0 ID=cds.g5932.t1;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . exon 42893 42941 . - . ID=g5932.t1.exon2;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . CDS 42893 42941 . - 2 ID=cds.g5932.t1;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . exon 42434 42673 . - . ID=g5932.t1.exon3;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . CDS 42532 42673 . - 1 ID=cds.g5932.t1;Parent=g5932.t1 NODE_69_length_45303_cov_42.8472 . three_prime_UTR 42434 42531 . - . ID=g5932.t1.utr3p1;Parent=g5932.t1 #PROT g5932.t1 g5932 MDDKHDDKTDTQFVKLISSDGQEFIISRNCAMVSGTIKSMLSGPGQFSENESNEIHFRDISSQILEKVCKYFYFKVRYTNSVTEIPEFSIEPEIALDLLMAANFLDA* # PASA_UPDATE: g5923.t1, single gene model update, valid-1, status:[pasa:asmbl_8935,status:3], valid-1 # PASA_UPDATE: g5923.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8936,status:12],[pasa:asmbl_8938,status:12], valid-1 NODE_69_length_45303_cov_42.8472 . gene 3977 5289 . + . ID=g5923;Name=g5923.t1 NODE_69_length_45303_cov_42.8472 . mRNA 3977 5289 . + . ID=g5923.t1;Parent=g5923;Name=g5923.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 3977 4011 . + . ID=g5923.t1.utr5p1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . exon 3977 4068 . + . ID=g5923.t1.exon1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . CDS 4012 4068 . + 0 ID=cds.g5923.t1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . exon 4439 4759 . + . ID=g5923.t1.exon2;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . CDS 4439 4759 . + 0 ID=cds.g5923.t1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . exon 5019 5289 . + . ID=g5923.t1.exon3;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . CDS 5019 5123 . + 0 ID=cds.g5923.t1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . three_prime_UTR 5124 5289 . + . ID=g5923.t1.utr3p1;Parent=g5923.t1 NODE_69_length_45303_cov_42.8472 . mRNA 3981 5281 . + . ID=g5923.t1.1.5b6be70c;Parent=g5923;Name=g5923.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 3981 4011 . + . ID=g5923.t1.1.5b6be70c.utr5p1;Parent=g5923.t1.1.5b6be70c NODE_69_length_45303_cov_42.8472 . exon 3981 4068 . + . ID=g5923.t1.1.5b6be70c.exon1;Parent=g5923.t1.1.5b6be70c NODE_69_length_45303_cov_42.8472 . CDS 4012 4068 . + 0 ID=cds.g5923.t1.1.5b6be70c;Parent=g5923.t1.1.5b6be70c NODE_69_length_45303_cov_42.8472 . exon 4439 5281 . + . ID=g5923.t1.1.5b6be70c.exon2;Parent=g5923.t1.1.5b6be70c NODE_69_length_45303_cov_42.8472 . CDS 4439 4804 . + 0 ID=cds.g5923.t1.1.5b6be70c;Parent=g5923.t1.1.5b6be70c NODE_69_length_45303_cov_42.8472 . three_prime_UTR 4805 5281 . + . ID=g5923.t1.1.5b6be70c.utr3p1;Parent=g5923.t1.1.5b6be70c #PROT g5923.t1 g5923 MPSFQILLEPRGAVKFIQMVLSIVAFALTVQSECHVGYKDFHGKDGNYIKFFIAIGIISFILSTALLIIYIAAFDRMPAVFNLAEAITTAVYAFLWLLASALLATAVNDTNFGTCNSLETNYKSSTIIGFVLMLLYIGGTYFVYKDHRDGRHGGGNPSSV* #PROT g5923.t1.1.5b6be70c g5923 MPSFQILLEPRGAVKFIQMVLSIVAFALTVQSECHVGYKDFHGKDGNYIKFFIAIGIISFILSTALLIIYIAAFDRMPAVFNLAEAITTAVYAFLWLLASALLATAVNDTNFGTCNSLETNYKSSTVCGGTSCCICRVVK* # PASA_UPDATE: g5926.t1, single gene model update, valid-1, status:[pasa:asmbl_8931,status:12],[pasa:asmbl_8940,status:12], valid-1 NODE_69_length_45303_cov_42.8472 . gene 13047 17097 . - . ID=g5926;Name=g5926.t1 NODE_69_length_45303_cov_42.8472 . mRNA 13047 17097 . - . ID=g5926.t1;Parent=g5926;Name=g5926.t1 NODE_69_length_45303_cov_42.8472 . exon 16217 17097 . - . ID=g5926.t1.exon1;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . CDS 16217 17097 . - 0 ID=cds.g5926.t1;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . exon 15682 15950 . - . ID=g5926.t1.exon2;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . CDS 15682 15950 . - 1 ID=cds.g5926.t1;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . exon 14892 15551 . - . ID=g5926.t1.exon3;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . CDS 14892 15551 . - 2 ID=cds.g5926.t1;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . exon 13306 14780 . - . ID=g5926.t1.exon4;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . CDS 13306 14780 . - 2 ID=cds.g5926.t1;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . exon 13047 13154 . - . ID=g5926.t1.exon5;Parent=g5926.t1 NODE_69_length_45303_cov_42.8472 . CDS 13047 13154 . - 0 ID=cds.g5926.t1;Parent=g5926.t1 #PROT g5926.t1 g5926 MPFRQWWEARRASLLRSYRFIVLGKRPRSTRTARSAPPAVVAAVKKKKDEVLPTASHPSLTQERVHSKGIQRTADNDEDGSADAIASAPLWDVSVTWQPASCATVVRVALLCLCVLALSCAQGAWRDALKSIFMSERDFAEVGMGGLLHIESVADASYDACASFGTENDIYFERFGGLWCTRANYRPPASIDTSDGTPGLIEMEDLRKVFATKSDANEYYQRFWGRLVRPVVRFSDLQEANRGFSCVGRDCRVYTWVEAVDRLERWWGDDVPPAFDVSDGAPRFMKRHVVYIFRTGRAVVRLRIAGDAERFQPQDAGSIVRRVYAVVTRSLRPQREEWRRRSFLRDDSDEHTSTAMSVTYSALSAVDFVLVSMFGWTGSAMVTATESRTKIPFSPIDSFKQPGERLSSSLSAASASLDFIVSSGAISTSSVASAAASEGANNQPRMAPVTKSRAIMDRVDGLIDTLRRQVDDRAEPYRSVLSDLKDLRRVLKSAQHHEVLLRTKHEELRRLLGLDGAIDASSLLSSAAESLSLSSVNSFSLQPTATPVLVSTWNIGRSGDGMDAVSGGSCNDRNDRDCHCEDVMPFSFGFNATEASSRDMRPPGGNLRVGIAVCALGMIILAYIARAAFKSGAHPSTASADVAAVEDTVVMEHGSSSALPPTIVADPLTRNGILRSEKRTRKHSTKKTGARAKAVNSVPINESTRCGPTDNAVPGIAVRDNAIPETPSSAAEPVMVSSSDDAAYTDDGVNAQTSEGGSCQNVTLVQIDQTDQTEQIGHTSDPIAVPPEYVGLTLRVDSRSVDGLPSNDAASAQTDEPLSNGPVIVIDNSRIPANSRSARLSFDSTSKCSDDGCSRGSSVCDADDSLGTFESADSESARTTSPECRRGGSVQSVGCRCGNNACQNGPSPSSQASPCVSPVAHPVCDSASDLHGPHTAVQPADAPEASDDSGFADDVSPKTSVSSCSSDSSDTRDVSRDGSPRVGRPRKRRGHSESCSLATASGKSSYLAPSHASCSALPDSESVRNRTQSDSVESPHSKSRRGKAAASVSHDRHVSCGSSDDGLIGHPPNRKARRASARMLAVYCYNCGVQGHCGQECTEMTMDEMLQFQQYQMVVPDMHLFDPSNSNLRF* # ORIGINAL: g5927.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 17971 18855 . + . ID=g5927;Name=g5927.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 17971 18855 . + . ID=g5927.t1;Parent=g5927;Name=g5927.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 17971 18855 . + . ID=g5927.t1.exon1;Parent=g5927.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 17971 18855 . + 0 ID=cds.g5927.t1;Parent=g5927.t1 #PROT g5927.t1 g5927 MESPSMRGSAAADNDALARIEFLYAAAHAYAQAAPALSQSYFINMKNVASRARIKLAPSIERSFCGKCGALFAGHAKVRVGPAKRKQKGKAPTAGDAAAPGAGDNGASADSKAIERAFAYHIVSSTDERISCRSKRRVRVTCGCCKTTHVYEGATRADVVTNRAASAATLSTDSGVKSQSITSTPLLSSKSPHSGTQSLVTTPTSARSMSAGPGSAGSWGSPLPARSPGGVISGGISKQGNKGSTNNSHNSSNMKKKKASLQAMLQASSKGVAAKDRKSDGPSRLEQFLASMKS* # ORIGINAL: g5930.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 37966 40576 . + . ID=g5930;Name=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 37966 40576 . + . ID=g5930.t1;Parent=g5930;Name=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 37966 38298 . + . ID=g5930.t1.exon1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 37966 38298 . + 0 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 38415 38518 . + . ID=g5930.t1.exon2;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 38415 38518 . + 0 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 38706 38958 . + . ID=g5930.t1.exon3;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 38706 38958 . + 1 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 39138 39297 . + . ID=g5930.t1.exon4;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 39138 39297 . + 0 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 39503 39615 . + . ID=g5930.t1.exon5;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 39503 39615 . + 2 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 39759 39828 . + . ID=g5930.t1.exon6;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 39759 39828 . + 0 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 39965 40099 . + . ID=g5930.t1.exon7;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 39965 40099 . + 2 ID=cds.g5930.t1;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 40293 40576 . + . ID=g5930.t1.exon8;Parent=g5930.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 40293 40576 . + 2 ID=cds.g5930.t1;Parent=g5930.t1 #PROT g5930.t1 g5930 MVSLALFALGGFWAAVIALDHFLHGKYKHVYSDWLESAGLSVSPGRISWYTTRLNRLFVAVGTYAAPLLRIWFNCGVVFGVIAMIASVLILIANLYKTVFIPAEPRILTPVVPGVNIPTNQLFYYAVALAISGFIHEVGHAIAATCDRVPVNGFGLFMFVLYPGAFVDLAMDSMTVLSPHKQLRIYFAGAWHNFVVAVSAYGLLFILPILLLPAYACAPGGGVTVTAVAEDSPLNGALIPGTRVIGLDECVVGTREEWVTCVHGVQQKGYCSPRAMADDAKAEVFRNGEDFLECCNITSIRGESTFCFAHWEEKDTLRANPSFACLAARRTMEERRCFTNADCAGASGVEDSVCLQPVLPDTTTRLMSLNIDGMKPLLFVGDPLVFAVSVSVSDCQPRHALLPLRLPEQIDTQLRYLFSLSGALALLNLVPCYKLDGQWALVSLVDALLRGRMSEKQREGISETIVLAGTILFGANVAVAILM* # ORIGINAL: g5933.t1 original gene structure, not modified by PASA NODE_69_length_45303_cov_42.8472 AUGUSTUS gene 44065 45023 . + . ID=g5933;Name=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS mRNA 44065 45023 . + . ID=g5933.t1;Parent=g5933;Name=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 44065 44067 . + . ID=g5933.t1.exon1;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 44065 44067 . + 0 ID=cds.g5933.t1;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 44174 44555 . + . ID=g5933.t1.exon2;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 44174 44555 . + 0 ID=cds.g5933.t1;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 44663 44721 . + . ID=g5933.t1.exon3;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 44663 44721 . + 2 ID=cds.g5933.t1;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS exon 44913 45023 . + . ID=g5933.t1.exon4;Parent=g5933.t1 NODE_69_length_45303_cov_42.8472 AUGUSTUS CDS 44913 45023 . + 0 ID=cds.g5933.t1;Parent=g5933.t1 #PROT g5933.t1 g5933 MDIRKFLTKPPAKSGGGEQQSKERLTLPKKGSDKSVPEKAIVAKKESASSPATASPTTRRSPRSAAPVSRESSFKQSPGKDATRTASARSLAAAAEVEEPHHDVDDDFDVSARSKRNDKKKRRVISDEEDEIVSPFFADSKPIAKKPKVEQSREHEYAAEKVSARKRAHEASDEEAWVLLMALA* # PASA_UPDATE: g5925.t1, single gene model update, valid-1, status:[pasa:asmbl_8937,status:12], valid-1 NODE_69_length_45303_cov_42.8472 . gene 10898 12518 . + . ID=g5925;Name=g5925.t1 NODE_69_length_45303_cov_42.8472 . mRNA 10898 12518 . + . ID=g5925.t1;Parent=g5925;Name=g5925.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 10898 10939 . + . ID=g5925.t1.utr5p1;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . five_prime_UTR 11481 11488 . + . ID=g5925.t1.utr5p2;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . exon 10898 10939 . + . ID=g5925.t1.exon1;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . exon 11481 11932 . + . ID=g5925.t1.exon2;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . CDS 11489 11932 . + 0 ID=cds.g5925.t1;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . exon 12288 12518 . + . ID=g5925.t1.exon3;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . CDS 12288 12401 . + 0 ID=cds.g5925.t1;Parent=g5925.t1 NODE_69_length_45303_cov_42.8472 . three_prime_UTR 12402 12518 . + . ID=g5925.t1.utr3p1;Parent=g5925.t1 #PROT g5925.t1 g5925 MLIPKKNRLAIYENLFNEGVMVAVKDFNAPKHLELEVPNLQVIKALQSLKSRGYVTERFSWRHYYWYLTNEGIQYLRDYLHLTADVVPATLKKSTRPATARPSGRPEGERREYREGGDRDGYRRGGDRPSAGAGEKKVGAGADFKPDFRGGFGRGRAGFGGAPRDGAPREAGAGGFRGRGGAPRE* # ORIGINAL: g11782.t1 original gene structure, not modified by PASA NODE_1170_length_13401_cov_21.8027 AUGUSTUS gene 3365 9872 . - . ID=g11782;Name=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS mRNA 3365 9872 . - . ID=g11782.t1;Parent=g11782;Name=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 9798 9872 . - . ID=g11782.t1.exon1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 9798 9872 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 9452 9608 . - . ID=g11782.t1.exon2;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 9452 9608 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 9141 9292 . - . ID=g11782.t1.exon3;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 9141 9292 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 8874 9036 . - . ID=g11782.t1.exon4;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 8874 9036 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 8177 8668 . - . ID=g11782.t1.exon5;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 8177 8668 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 7807 8016 . - . ID=g11782.t1.exon6;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 7807 8016 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 7452 7652 . - . ID=g11782.t1.exon7;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 7452 7652 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 7154 7208 . - . ID=g11782.t1.exon8;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 7154 7208 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 6812 6897 . - . ID=g11782.t1.exon9;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 6812 6897 . - 1 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 6450 6563 . - . ID=g11782.t1.exon10;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 6450 6563 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 6067 6168 . - . ID=g11782.t1.exon11;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 6067 6168 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 5232 5284 . - . ID=g11782.t1.exon12;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 5232 5284 . - 2 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 4810 4914 . - . ID=g11782.t1.exon13;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 4810 4914 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 4396 4485 . - . ID=g11782.t1.exon14;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 4396 4485 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 4009 4095 . - . ID=g11782.t1.exon15;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 4009 4095 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 3365 3835 . - . ID=g11782.t1.exon16;Parent=g11782.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 3365 3835 . - 0 ID=cds.g11782.t1;Parent=g11782.t1 #PROT g11782.t1 g11782 MAGLIAVRVLAWAVLSIGLMAGTVQSQGRFLFKISILTLTNPGQVTDNNNWCDPGLFGLFGSDCDPYPEICYGYTSTREETGRDSDGDPVYGDVDHCVQRVVGTYVLDAPSPLYIYFDSTYAFDDTYKAKPFPIRVRLLDSDTGGYDEMLSFTILANTLTMPMSTVQKTYPFTKVPLSSLTYSYSVGCNTNYYGSDCKKFCSSSTNCSSNGVCTADGNACSCDYNYYGASCKTFCSSYTCSSRGSCTANGTACKCNTNYYDYDCSKYCIASTTCSSHGSCAANGTCICNADYYGPSCSKYCSANQTCGGHGTCNSAGDCVCSGNFSLTATPACGNCKSLFYGSTCQPCLCPSSRGTCNDTISGNGLCRTCKDSTLATPLCTPCECGVGGKCSSGPTGTGKCLYCNAANLYGENCDKVRTCGVKGQWVGGINQTVGTCSSCSTGYWGPNCDKNCTCVKGKCDANTGLCIDGSCEAYYYGRNCALKCAQTDCKCNDNTAGNGACLGTCSVANFDFTKNCTKCIPNYYNASCAGGVCQCVACPCVNGACDNNGNGSCTTCREGYWGLYCNQTCSCENALTNECGQRDGVCAAQCKSGFWGTDCKNVCDCVNGQPDDGVDGGGLGVPSEGIDGIGQCSSCKQGYVGLNCNATCTCKNGVCNDTVSGDGHCKNGTCDEGFAGSDCNECAENHFGKRCWECDACDTPGTVCNATIRGNGRCISTSGAQKPTTDSATGKSSTNITPIAAGAAAGGVLLVGAALFATYRYARREGKAVGSERTWQFFKSNTKESVRETRDSPALFLNPMHTANVSTDIQMEPMSGGVGGGSDGIQYANLAIARGTGPAPAAPAPNEYDIVRKKSEDLYATPTYDQIRR* # ORIGINAL: g11781.t1 original gene structure, not modified by PASA NODE_1170_length_13401_cov_21.8027 AUGUSTUS gene 2 2691 . + . ID=g11781;Name=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS mRNA 2 2691 . + . ID=g11781.t1;Parent=g11781;Name=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 2 83 . + . ID=g11781.t1.exon1;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 2 83 . + 2 ID=cds.g11781.t1;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 370 472 . + . ID=g11781.t1.exon2;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 370 472 . + 1 ID=cds.g11781.t1;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 1116 1475 . + . ID=g11781.t1.exon3;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 1116 1475 . + 0 ID=cds.g11781.t1;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 2332 2691 . + . ID=g11781.t1.exon4;Parent=g11781.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 2332 2691 . + 0 ID=cds.g11781.t1;Parent=g11781.t1 #PROT g11781.t1 g11781 GSQRHEGPNDAPSPGTSRWLRLAKFRRSVAKVSEQIREKKRVIKHGTLQARRKGHQKKYIDDFYFHMVRMRWPFLLLILLGIYVTMALVFASLYYIDRHGFDPDPRTFMEMFFHSMAILLDLESPYEPASHEEGLRFTAFVWIVYISEGFVSAIAGALLIGLLVDRLQTPSPRMLFSKNAIEHKSTEGHCLRRDVPLPLENGSRPVFHASWLLIHVISEHSPLYACSPNDGGEIPCVWVKVRGEDSTFEKTFHALQMYQPSNIVWGGQFVDVVSAGYDGILEVDLRHFHDVVVEGERTTL* # ORIGINAL: g11783.t1 original gene structure, not modified by PASA NODE_1170_length_13401_cov_21.8027 AUGUSTUS gene 10434 11772 . + . ID=g11783;Name=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS mRNA 10434 11772 . + . ID=g11783.t1;Parent=g11783;Name=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 10434 10544 . + . ID=g11783.t1.exon1;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 10434 10544 . + 0 ID=cds.g11783.t1;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 10814 10967 . + . ID=g11783.t1.exon2;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 10814 10967 . + 0 ID=cds.g11783.t1;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 11197 11303 . + . ID=g11783.t1.exon3;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 11197 11303 . + 2 ID=cds.g11783.t1;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS exon 11503 11772 . + . ID=g11783.t1.exon4;Parent=g11783.t1 NODE_1170_length_13401_cov_21.8027 AUGUSTUS CDS 11503 11772 . + 0 ID=cds.g11783.t1;Parent=g11783.t1 #PROT g11783.t1 g11783 MASLVSIRSSMHPTHPAPIYMLLACVCLFLAVLPVVKAQAGGFVFVNLTSLYDPDTITSADEYCDSFSTCDVIASICVGASRTKDPGPGNCKSTEYQSGKYQDAPAFISLSPTGGTFNFSGSYKTNVAFDITFYDADVGSNDLMASNIFYGSDLTVSTTSSPTRMTYSFNTDGYYYNPATVTWGGCWIARANCSRILDCVPGLVSAGSLVDLG* # ORIGINAL: g13262.t1 original gene structure, not modified by PASA NODE_3048_length_4450_cov_32.7415 AUGUSTUS gene 208 4276 . - . ID=g13262;Name=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS mRNA 208 4276 . - . ID=g13262.t1;Parent=g13262;Name=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 4116 4276 . - . ID=g13262.t1.exon1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 4116 4276 . - 0 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 3697 3801 . - . ID=g13262.t1.exon2;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 3697 3801 . - 1 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 3335 3437 . - . ID=g13262.t1.exon3;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 3335 3437 . - 1 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 2996 3066 . - . ID=g13262.t1.exon4;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 2996 3066 . - 0 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 2628 2781 . - . ID=g13262.t1.exon5;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 2628 2781 . - 1 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 2353 2492 . - . ID=g13262.t1.exon6;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 2353 2492 . - 0 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 1758 2096 . - . ID=g13262.t1.exon7;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 1758 2096 . - 1 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 1068 1494 . - . ID=g13262.t1.exon8;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 1068 1494 . - 1 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 578 730 . - . ID=g13262.t1.exon9;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 578 730 . - 0 ID=cds.g13262.t1;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS exon 208 351 . - . ID=g13262.t1.exon10;Parent=g13262.t1 NODE_3048_length_4450_cov_32.7415 AUGUSTUS CDS 208 351 . - 0 ID=cds.g13262.t1;Parent=g13262.t1 #PROT g13262.t1 g13262 MLHCHTQVIGLAAAFNMTLVREIARAVSTEARAFANAGQAGLSFFTPNINIFRDPRWGRGMETPGEDPYLTSRYVEQLIRGLQEGEDARYYKILATCKHYAAYDLENYKGMDRFHFNAIVNDRDLVETYLAPFEACVRAEVASIMCSYNAVNGVPSCANDFLMNQVARGEWDFEGYFVSDCGAIDVIQNTHNYTNNPQDTCRVAITGGCDLDCGDFYQKNMASSANMTGVADAIDASLVRLFGHRIRLGEFDAASQQPYRRIGADSVDTAEHRALALDAARQSIVLLRNSNGVLPLSPSAIKTIAVVGPNANATVTMQGNYYGTAPFLVTPVEGFGEALGSNERVLYAQGASISGTDKSGFADAVAAASSADATIVVVGIDCDVEAEGLDRTSLELPGVQWELVAAVKNATRTPVVVIVMSGGAIDLAPALDIADAVLWVGYPGQYGGQAIAEAVLGVFSPSGRLPYTIYPASYAEEVDFFDMNMRAGPGRTYRFYTGTPVFAFGHGLSYTQFEYAWAAESHAFMERSTANIGAASDVLASYRVNVTNTGKIASEVSVLAFIEGKAQSDGPLKELVGFQKASDRSHSPFVECLRRRLQ* # ORIGINAL: g2638.t1 original gene structure, not modified by PASA NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS gene 4874 5275 . - . ID=g2638;Name=g2638.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS mRNA 4874 5275 . - . ID=g2638.t1;Parent=g2638;Name=g2638.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS exon 4874 5275 . - . ID=g2638.t1.exon1;Parent=g2638.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS CDS 4874 5275 . - 0 ID=cds.g2638.t1;Parent=g2638.t1 #PROT g2638.t1 g2638 MTVRAPSTPTCMFAKIMTDARPVARLHTLCLVGLVAIADVSPLRDVHHLVLQACSAVTDVGALKNVHTLSLTNCPLVRHVSALGSVHELTLADCPALTDGARHRSHARPKELSRGNRHLGAQHRSHALAAIHV* # ORIGINAL: g2636.t1 original gene structure, not modified by PASA NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS gene 1820 3373 . - . ID=g2636;Name=g2636.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS mRNA 1820 3373 . - . ID=g2636.t1;Parent=g2636;Name=g2636.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS exon 1820 3373 . - . ID=g2636.t1.exon1;Parent=g2636.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS CDS 1820 3373 . - 0 ID=cds.g2636.t1;Parent=g2636.t1 #PROT g2636.t1 g2636 MKIMRYMAEADKQILAHTCRFFRRAVIASKYAWHIKSECIREYYTDAAKRDALHKDNPMRYMLSVWSLARFSPGGVEWLASLTDVSPFSRLHSLTLDTCNALTDVSPLRSVSRLLFIECRQLADVSALAGADLLHLQGGDAVIDMSALGGVREVVLDRCDGIVDVTALGGAHDITLIACNNIESVAALNSVRELNILECENVRDLHLLTNVHTLNVQDTGSQDRRQHLDAFGHSHTLAFDNASDLPDVSALRNVHALYLQGSGGAIWDVSPLAVLHTLSITKDAQLVDVSALGRVHTLELVNIRCADVSALGGVHNLTLDLCSDVRDVSALGRVHTLTLCQMEGVKDVSALGGVHTLTLQGLLHVTDVSALRHVTRLTMRYCRRIQDVSALGNVHTLVLHDAPHIRDVSALGHVHALTLIEVGVSDVSALGTVHSLALHVDDVSALGGVHTLCIVSLNQLKDVSPLATVRELYLGNCARIKDISMLRNVFRLSVERFIGVKDVSVLAGMRRFTFRKN* # ORIGINAL: g2635.t1 original gene structure, not modified by PASA NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS gene 816 1717 . - . ID=g2635;Name=g2635.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS mRNA 816 1717 . - . ID=g2635.t1;Parent=g2635;Name=g2635.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS exon 1572 1717 . - . ID=g2635.t1.exon1;Parent=g2635.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS CDS 1572 1717 . - 0 ID=cds.g2635.t1;Parent=g2635.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS exon 816 1101 . - . ID=g2635.t1.exon2;Parent=g2635.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS CDS 816 1101 . - 1 ID=cds.g2635.t1;Parent=g2635.t1 #PROT g2635.t1 g2635 MNASVEMASSSSFASASSLASSSSPHISRWLPSKSHYRDCACVWTIVGRNKDGAAFYEYLCRAIFKREPFLRSATTKPNWLTGVYREALARGDAKFIDIICNFTNGQKLSATKEQLATFTRASDSGDYALLYDTMCRIVGHAK* # PASA_UPDATE: g2640.t1, single gene model update, valid-1, status:[pasa:asmbl_867,status:3], valid-1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . gene 9205 11664 . - . ID=g2640;Name=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . mRNA 9205 11664 . - . ID=g2640.t1;Parent=g2640;Name=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . five_prime_UTR 11516 11664 . - . ID=g2640.t1.utr5p1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 11262 11664 . - . ID=g2640.t1.exon1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 11262 11515 . - 0 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 10763 11009 . - . ID=g2640.t1.exon2;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 10763 11009 . - 1 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 10445 10612 . - . ID=g2640.t1.exon3;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 10445 10612 . - 0 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 10266 10301 . - . ID=g2640.t1.exon4;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 10266 10301 . - 0 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 10047 10153 . - . ID=g2640.t1.exon5;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 10047 10153 . - 0 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 9855 9924 . - . ID=g2640.t1.exon6;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 9855 9924 . - 1 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 9205 9586 . - . ID=g2640.t1.exon7;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 9353 9586 . - 0 ID=cds.g2640.t1;Parent=g2640.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . three_prime_UTR 9205 9352 . - . ID=g2640.t1.utr3p1;Parent=g2640.t1 #PROT g2640.t1 g2640 MGSIVATRTDKELLDVYLTPRLAAHMTACEGTILQKLWAFLKTGIMFDAEIWLTKTRELIGDFTFEEAYLRTGRVFNVTITSSNRHAPSKILNYITAPHVVVYSAVVASAAIPGLLAPIELLHKDEHGNIEPYHVEGFKWTDGSLKTDLPFNSLAHLFNVNFFVVSQVNPHIIPFFFDRTGSAGQPVGGRNRGGFWIAAVETLLKQDMKKWLTVLRELDLSPQIFGHDWSLVFLQEFVGSVTIVPNPRLEDYVMIVTDPTPERMQGYISRGQVIAWTKMTMIEMTYGIEKLIEESSLRANNGSGLFEALHERQKREESARRAKLAHSDSWKRNQLAEHELAAETEKTPFASGSGVHLPHSTASFARRMTIH* # ORIGINAL: g2637.t1 original gene structure, not modified by PASA NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS gene 3754 4857 . - . ID=g2637;Name=g2637.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS mRNA 3754 4857 . - . ID=g2637.t1;Parent=g2637;Name=g2637.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS exon 3754 4857 . - . ID=g2637.t1.exon1;Parent=g2637.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant AUGUSTUS CDS 3754 4857 . - 0 ID=cds.g2637.t1;Parent=g2637.t1 #PROT g2637.t1 g2637 MLGGVRALYLHQCPSIVSVADLRDVPTHSIDQCCSVTDVHMLTGHHTLQLKGYPRINRDTLAAIRGTRSLDLSCRIDVQDVSDLGGVHTLNLTGCDDVKDVSALGNMYCLALNGCRTITDVSALRNVRFLNLAHCILLADVSALAHVHTLNLTSCKCINDVSMLGRVYKLILAGCTGIADVSALGRVHTLRLAGCDSIADVSALGTVYDLDLSMIHCIMDVSALGRVHRLSLRQCRGIVDVSALGTVYELDLAKCHGIRDVSALRGVRSLNLSYCSQITDASALRDVHTLVLYQCEGITHMPAPERVFHLSPHATDTFGNPNTHLTGAIRGKHVPPCIYHVPLCIASAAGATEDWGNEGDEENNDEY* # PASA_UPDATE: g2639.t1, single gene model update, valid-1, status:[pasa:asmbl_868,status:12], valid-1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . gene 6893 9116 . + . ID=g2639;Name=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . mRNA 6893 9116 . + . ID=g2639.t1;Parent=g2639;Name=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 6893 7161 . + . ID=g2639.t1.exon1;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 6893 7161 . + 0 ID=cds.g2639.t1;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 7474 8209 . + . ID=g2639.t1.exon2;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 7474 8209 . + 1 ID=cds.g2639.t1;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . exon 8364 9116 . + . ID=g2639.t1.exon3;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . CDS 8364 8858 . + 0 ID=cds.g2639.t1;Parent=g2639.t1 NODE_1227_length_12892_cov_50.8648_potentialcontaminant . three_prime_UTR 8859 9116 . + . ID=g2639.t1.utr3p1;Parent=g2639.t1 #PROT g2639.t1 g2639 MPFLRSKLHMVIAEARRFGPAQPVGSSPSFYVSLRAGFSVRETDHCAAVHLQNVEHDDRKTTTACVWNQAFQLRILDSCEYVHIHLRSKRPDGVDDLVGKATLSIRSYFDGVFHDDWVPLLSVHAEDIHGEQDCSKERSDPRGCAPQSDIPSQPVGSSLSGTASTGGSGDVQWRVRVRARHQSGFLTELSRAFFGPVDGDASGVAETAEEPDALLAFAASSDSETDTRGPMRQSTVTCAAQAFSPRRVLAAYDELRSMLVPAIAAMDAVDALVGCVDGPASAAAYAVALLLWIWSPPLLTLLAVVLCCAIAFGFVQSRLRPPRKRTTSRQAFTPLPGDTSAGVKLSCIVSKDRSSSIASDSGSTLAISRSGSFRLSRAAGEPLLTSGDPETERFVRVMAKVQLLLRRIASMLASAEDVLLWRAPRTTMFVLALGLAAWLLSLLFSMYDLGFGWITCLFALNTRAADHIIAGARAAGEYARCRAPVAMNGLRSAMRSKLE* # ORIGINAL: g11057.t1 original gene structure, not modified by PASA NODE_3027_length_4505_cov_37.8314 AUGUSTUS gene 90 3539 . + . ID=g11057;Name=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS mRNA 90 3539 . + . ID=g11057.t1;Parent=g11057;Name=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 90 225 . + . ID=g11057.t1.exon1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 90 225 . + 2 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 377 464 . + . ID=g11057.t1.exon2;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 377 464 . + 1 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 700 856 . + . ID=g11057.t1.exon3;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 700 856 . + 0 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 1171 1295 . + . ID=g11057.t1.exon4;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 1171 1295 . + 2 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 1493 1597 . + . ID=g11057.t1.exon5;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 1493 1597 . + 0 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 1771 1913 . + . ID=g11057.t1.exon6;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 1771 1913 . + 0 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 2081 3185 . + . ID=g11057.t1.exon7;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 2081 3185 . + 1 ID=cds.g11057.t1;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS exon 3426 3539 . + . ID=g11057.t1.exon8;Parent=g11057.t1 NODE_3027_length_4505_cov_37.8314 AUGUSTUS CDS 3426 3539 . + 0 ID=cds.g11057.t1;Parent=g11057.t1 #PROT g11057.t1 g11057 ILAKKAAERGLSVAPYIRTSFSPGSRVVAFYLEESGVLPALEQIGFPTVGFGCMTCAGNSGGPLPDAVSAVIEKQKLVAVGVLSGNRNFEGRIHPLTSANYLASPMLVIAYAISGRIDIDFDNEPLAVGSDGSAIFLRDIWPTREEIHRVERDVIVPAVFKEVKQRLMSGTLPWDSLASPTGPLFPWDTNSTYIKRPPFTDHLSREVRAPSTMKGVPVLLMLGDGVNTDHISPAGSILRNSPASKYLASRGLAPRDFGSYGARRAHDAVMARGTFGNPKLTNCALASVPGGAHAKGSGACGAGNTAAVKAVHVPSLDVMDVFECSERYRHEGRAPPLAVLAGSDYGVGSSREWAVKGPWAVGVRIVLAYSFDAKHRAALAAMGILPLQFVSESVGDAALSAEKSAVVVGDDDVGVGRTVARTANADGNPRAAEGTCGHVHLGASVGSAGSTAAEFCADTSCSNFGTSGFTPPIPLVYEQRPLRLTNMSSVDGTIKRSASATVSASASGGGAKKGGAVIHRVVGGRTVRVDHVTLGRDGFGLGCQVGPAKTAQACATAESERSFPANGCQNSRSVAPKAAASDAATHCKSKLCGSGLSGRELLSIDLPDSIGVGTLLTVKTDSGKQFDVKCMLESPVEVAYFKEGGFLNMAARSFLC* # PASA_UPDATE: g4402.t1, single gene model update, valid-1, status:[pasa:asmbl_3008,status:12], valid-1 NODE_1916_length_8555_cov_34.0348 . gene 5317 8478 . - . ID=g4402;Name=g4402.t1 NODE_1916_length_8555_cov_34.0348 . mRNA 5317 8478 . - . ID=g4402.t1;Parent=g4402;Name=g4402.t1 NODE_1916_length_8555_cov_34.0348 . five_prime_UTR 8388 8478 . - . ID=g4402.t1.utr5p1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . five_prime_UTR 8143 8171 . - . ID=g4402.t1.utr5p2;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 8388 8478 . - . ID=g4402.t1.exon1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 8041 8171 . - . ID=g4402.t1.exon2;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 8041 8142 . - 0 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 7640 7801 . - . ID=g4402.t1.exon3;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 7640 7801 . - 0 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 7250 7365 . - . ID=g4402.t1.exon4;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 7250 7365 . - 0 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 6948 7030 . - . ID=g4402.t1.exon5;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 6948 7030 . - 1 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 6611 6676 . - . ID=g4402.t1.exon6;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 6611 6676 . - 2 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 6049 6310 . - . ID=g4402.t1.exon7;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 6049 6310 . - 2 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . exon 5317 5681 . - . ID=g4402.t1.exon8;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . CDS 5591 5681 . - 1 ID=cds.g4402.t1;Parent=g4402.t1 NODE_1916_length_8555_cov_34.0348 . three_prime_UTR 5317 5590 . - . ID=g4402.t1.utr3p1;Parent=g4402.t1 #PROT g4402.t1 g4402 MIHNGIEYGDMQLITEAYDILKTIGGLTNDELAQAFAEWNRGNLSSFLIEITAKIFTVKDTLTGQGELVDKILDKTGMKGTGKWTVQQAAELSVPIPTISASLDARYLSGLKDDRVKCSHLFSYSTTAPAVDKKELIEMVHKALYASKICSYAQGMNIIRQASAAHNWGLDLGEISRIWKGGCIIRAVFLDRIKAAYDRDANLPSLLFDKDFAAELQSSQIAWRKIVQLAVEHGIAVAGFSGSLAYFDSYRRERHPANLVQAQRDLFGAHTYERVDRPAGEAFHTEWEAEAKL* # PASA_UPDATE: g4400.t1, single gene model update, valid-1, status:[pasa:asmbl_3006,status:12], valid-1 NODE_1916_length_8555_cov_34.0348 . gene 181 1721 . - . ID=g4400;Name=g4400.t1 NODE_1916_length_8555_cov_34.0348 . mRNA 181 1721 . - . ID=g4400.t1;Parent=g4400;Name=g4400.t1 NODE_1916_length_8555_cov_34.0348 . five_prime_UTR 1602 1721 . - . ID=g4400.t1.utr5p1;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . exon 1348 1721 . - . ID=g4400.t1.exon1;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . CDS 1348 1601 . - 0 ID=cds.g4400.t1;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . exon 792 909 . - . ID=g4400.t1.exon2;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . CDS 792 909 . - 1 ID=cds.g4400.t1;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . exon 181 463 . - . ID=g4400.t1.exon3;Parent=g4400.t1 NODE_1916_length_8555_cov_34.0348 . CDS 181 463 . - 0 ID=cds.g4400.t1;Parent=g4400.t1;3_prime_partial=true #PROT g4400.t1 g4400 MSARTRATVASAAVILLIVASSLSACTASPTGTLARPAHGAHLGEIEMLVDGFRPPSVPLIVTDPYQSVWLNADCLTDDWARHWSGPVMAMLGMARIDGVTYRFMGPSSATTVLVPAMQQTSVKVFPLRTVFTFTAGGVQLAVTFMTPAIASDPATLSLPVTFVTYDISSVDGEKHSVQLYYDNTAEVAVASVEEEVDWAEAEVADHVALRVGTNAQN # PASA_UPDATE: g4401.t1, single gene model update, valid-1, status:[pasa:asmbl_3007,status:3], valid-1 NODE_1916_length_8555_cov_34.0348 . gene 2032 4943 . - . ID=g4401;Name=g4401.t1 NODE_1916_length_8555_cov_34.0348 . mRNA 2032 4943 . - . ID=g4401.t1;Parent=g4401;Name=g4401.t1 NODE_1916_length_8555_cov_34.0348 . five_prime_UTR 4831 4943 . - . ID=g4401.t1.utr5p1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . exon 4720 4943 . - . ID=g4401.t1.exon1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . CDS 4720 4830 . - 0 ID=cds.g4401.t1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . exon 4101 4294 . - . ID=g4401.t1.exon2;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . CDS 4101 4294 . - 0 ID=cds.g4401.t1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . exon 3216 3735 . - . ID=g4401.t1.exon3;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . CDS 3216 3735 . - 1 ID=cds.g4401.t1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . exon 2032 2602 . - . ID=g4401.t1.exon4;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . CDS 2189 2602 . - 0 ID=cds.g4401.t1;Parent=g4401.t1 NODE_1916_length_8555_cov_34.0348 . three_prime_UTR 2032 2188 . - . ID=g4401.t1.utr3p1;Parent=g4401.t1 #PROT g4401.t1 g4401 MAEESARQGPIPPLGGWTLDSLPDDALHCIFQFENDKTERLLASDLDAVSRTCRRLRLVCEEEARRRVAKLWKGMAECTDYENGAPYPTLAPVANPFCGPPSTVPDVFSAETRGFDKKVFGTWLFSDRMRPIKRPTDSWICVLSREEFADGTVSLAKDDARFQVHLKRTYEAFIAGPWWATLTDEEKDALTHYTQHSRVCGRVYIPHLLDVECEYNEYTTTAEISIDKGNGTKNQLFEIHVGEKMKDDSQADLQDTSQYLTVPRCKFITYRASFFRSQINMWSQTWENVRKRRGPKPLSYRAFLLLVRLCVEAVGALDAELDNGSSWALLNECAYRDSVLVARLTEIIKVLASSGSRPPSQFDEDRVMSRVKKVATGRLIKSRNFNYGLSGWPIRQAVSRVLGSIDSELTTA* # ORIGINAL: g11809.t1 original gene structure, not modified by PASA NODE_3104_length_4302_cov_41.8524 AUGUSTUS gene 3060 4010 . - . ID=g11809;Name=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS mRNA 3060 4010 . - . ID=g11809.t1;Parent=g11809;Name=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 3803 4010 . - . ID=g11809.t1.exon1;Parent=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 3803 4010 . - 0 ID=cds.g11809.t1;Parent=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 3497 3636 . - . ID=g11809.t1.exon2;Parent=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 3497 3636 . - 2 ID=cds.g11809.t1;Parent=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 3060 3224 . - . ID=g11809.t1.exon3;Parent=g11809.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 3060 3224 . - 0 ID=cds.g11809.t1;Parent=g11809.t1 #PROT g11809.t1 g11809 MVSIRYIVQQIDELLQSGTFDRRKGVWAKSMVHILQDKGRLRPDSPHFVTIPEGSSVYEALQAMEANKIGALLVSGDDGITGIVTERDHVTKVVLKGKRSKATRVGEIMTPAPLFEVPPNTQLADAFRMVAHRRIRHLPVVFHMQDSYQQELRVVGVVSVRDLIATAHGN* # ORIGINAL: g11808.t1 original gene structure, not modified by PASA NODE_3104_length_4302_cov_41.8524 AUGUSTUS gene 196 1899 . - . ID=g11808;Name=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS mRNA 196 1899 . - . ID=g11808.t1;Parent=g11808;Name=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 1816 1899 . - . ID=g11808.t1.exon1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 1816 1899 . - 0 ID=cds.g11808.t1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 1389 1692 . - . ID=g11808.t1.exon2;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 1389 1692 . - 0 ID=cds.g11808.t1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 1107 1125 . - . ID=g11808.t1.exon3;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 1107 1125 . - 2 ID=cds.g11808.t1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 795 901 . - . ID=g11808.t1.exon4;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 795 901 . - 1 ID=cds.g11808.t1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 499 656 . - . ID=g11808.t1.exon5;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 499 656 . - 2 ID=cds.g11808.t1;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS exon 196 261 . - . ID=g11808.t1.exon6;Parent=g11808.t1 NODE_3104_length_4302_cov_41.8524 AUGUSTUS CDS 196 261 . - 0 ID=cds.g11808.t1;Parent=g11808.t1 #PROT g11808.t1 g11808 MADQDDFRGDPFGDLLPQGQHLADKSGPVGMARPSSAPPCVRVAALSGDPAYAERHRLRLDEFAREVMGIRGDDWLAQTKITPLKPSTKAAAELKKCPSVPTLMPSYRRSMVVHADKGQHGRDEAHRYDPSSEGQRRGIDFSMNLDHFYQLMDAFQAADTDGSGGLDIDEVWIRSGMFTLLVSRTLTFQFREAFGSILGRNLNKDQMTMLFMKIDANSDGTVDWDEFCTYMLLEKKGELEMMEGDT # PASA_UPDATE: g6904.t1, single gene model update, valid-1, status:[pasa:asmbl_3368,status:3], valid-1 # PASA_UPDATE: g6904.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3369,status:3], valid-1 NODE_204_length_31758_cov_41.5205 . gene 4310 7659 . - . ID=g6904;Name=g6904.t1 NODE_204_length_31758_cov_41.5205 . mRNA 4310 7659 . - . ID=g6904.t1;Parent=g6904;Name=g6904.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 7607 7659 . - . ID=g6904.t1.utr5p1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 7502 7659 . - . ID=g6904.t1.exon1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 7502 7606 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 7253 7417 . - . ID=g6904.t1.exon2;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 7253 7417 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 7002 7138 . - . ID=g6904.t1.exon3;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 7002 7138 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 6350 6911 . - . ID=g6904.t1.exon4;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 6350 6911 . - 1 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 6133 6265 . - . ID=g6904.t1.exon5;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 6133 6265 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 5832 6009 . - . ID=g6904.t1.exon6;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 5832 6009 . - 2 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 5507 5666 . - . ID=g6904.t1.exon7;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 5507 5666 . - 1 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 5304 5357 . - . ID=g6904.t1.exon8;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 5304 5357 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 4895 5104 . - . ID=g6904.t1.exon9;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 4895 5104 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 4550 4721 . - . ID=g6904.t1.exon10;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 4550 4721 . - 0 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . exon 4310 4432 . - . ID=g6904.t1.exon11;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . CDS 4365 4432 . - 2 ID=cds.g6904.t1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 4310 4364 . - . ID=g6904.t1.utr3p1;Parent=g6904.t1 NODE_204_length_31758_cov_41.5205 . mRNA 4310 7659 . - . ID=g6904.t1.1.5b6be70b;Parent=g6904;Name=g6904.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 7607 7659 . - . ID=g6904.t1.1.5b6be70b.utr5p1;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 7502 7659 . - . ID=g6904.t1.1.5b6be70b.exon1;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 7502 7606 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 7253 7417 . - . ID=g6904.t1.1.5b6be70b.exon2;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 7253 7417 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 7002 7138 . - . ID=g6904.t1.1.5b6be70b.exon3;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 7002 7138 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 6350 6911 . - . ID=g6904.t1.1.5b6be70b.exon4;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 6350 6911 . - 1 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 6133 6265 . - . ID=g6904.t1.1.5b6be70b.exon5;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 6133 6265 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 5832 6009 . - . ID=g6904.t1.1.5b6be70b.exon6;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 5832 6009 . - 2 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 5507 5666 . - . ID=g6904.t1.1.5b6be70b.exon7;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 5507 5666 . - 1 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 5304 5357 . - . ID=g6904.t1.1.5b6be70b.exon8;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 5304 5357 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 4895 5104 . - . ID=g6904.t1.1.5b6be70b.exon9;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 4895 5104 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . exon 4310 4721 . - . ID=g6904.t1.1.5b6be70b.exon10;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . CDS 4461 4721 . - 0 ID=cds.g6904.t1.1.5b6be70b;Parent=g6904.t1.1.5b6be70b NODE_204_length_31758_cov_41.5205 . three_prime_UTR 4310 4460 . - . ID=g6904.t1.1.5b6be70b.utr3p1;Parent=g6904.t1.1.5b6be70b #PROT g6904.t1 g6904 MARACLFVGMLAIACFASSASAFYLPGVSPKKFEKGDEIKLLVNRLDSTLTAVPFDFAHFLTCPVRSPDHGENLGQVLLGERIMEAPSYKINFLQNVDCAVACSVSSKGQENGYEENQKRYENLYHGVQKRYIHHWIVDNLPVVQKVHALDPDGKTTDRFRVYFPLGCEGNDHERHLCDTTGMESGKYYLNNHVHLTIEYHNETTGTHIVAIVVEPRSIDHKSETEALCVAEVKALPLLELPPPNKANGFKAVYTYSVSFQPSKTAWHSRWDVYLNTMDAKIHWFSIVNSLIIVLFLSGMVAMILLRSLHRDLARYNQTDLSQEDAQEEFGWKLVHGDVFRAPSFAMLLAVSVGTGVQVLVMTLISLVFACLGFLSPSTRGGLMVCLIVLYILLGTPAGYVSARLYKMFGGEKWKSNVLLTSFFYPGLLFVVFFFLNIVLWSQKSSSAIPISTMIALVFLWFGISVPLCFLGAYLGFRKSAIEHPVRTNQIPRQIPEQVFYMRPLPAILMGSVLPFSAVFIELYFIISSVWFDLFYYLFGFLFLVFVILAVTCSEVSILMCYFQLCAEDYHWWWRSFLTSGFTGLYLYIYSIVYYFTRLEMNGFVSGAIYFGYSFMASLLVFVLTGTIGFLACLFFVRKIYASVKID* #PROT g6904.t1.1.5b6be70b g6904 MARACLFVGMLAIACFASSASAFYLPGVSPKKFEKGDEIKLLVNRLDSTLTAVPFDFAHFLTCPVRSPDHGENLGQVLLGERIMEAPSYKINFLQNVDCAVACSVSSKGQENGYEENQKRYENLYHGVQKRYIHHWIVDNLPVVQKVHALDPDGKTTDRFRVYFPLGCEGNDHERHLCDTTGMESGKYYLNNHVHLTIEYHNETTGTHIVAIVVEPRSIDHKSETEALCVAEVKALPLLELPPPNKANGFKAVYTYSVSFQPSKTAWHSRWDVYLNTMDAKIHWFSIVNSLIIVLFLSGMVAMILLRSLHRDLARYNQTDLSQEDAQEEFGWKLVHGDVFRAPSFAMLLAVSVGTGVQVLVMTLISLVFACLGFLSPSTRGGLMVCLIVLYILLGTPAGYVSARLYKMFGGEKWKSNVLLTSFFYPGLLFVVFFFLNIVLWSQKSSSAIPISTMIALVFLWFGISVPLCFLGAYLGFRKSAIEHPVRTNQIPRQIPEQVFYMRPLPAILMGSVLPFSAVFIELYFIISSVWFDLFYYLFGFLFLVFVILAVTCSEVSILMCYFQLCAEDYHWWWRSFLTSGFTGLYLYIYSIVYYFTRLEMNGFVSGAIYFGYSFMASLLVFVLTGGCGSIRVTSCVPPCVNLAGRFCTFRFGR* # ORIGINAL: g6906.t1 original gene structure, not modified by PASA NODE_204_length_31758_cov_41.5205 AUGUSTUS gene 10318 11784 . + . ID=g6906;Name=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS mRNA 10318 11784 . + . ID=g6906.t1;Parent=g6906;Name=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 10318 10336 . + . ID=g6906.t1.exon1;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 10318 10336 . + 0 ID=cds.g6906.t1;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 10453 10800 . + . ID=g6906.t1.exon2;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 10453 10800 . + 2 ID=cds.g6906.t1;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 10871 11343 . + . ID=g6906.t1.exon3;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 10871 11343 . + 2 ID=cds.g6906.t1;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 11680 11784 . + . ID=g6906.t1.exon4;Parent=g6906.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 11680 11784 . + 0 ID=cds.g6906.t1;Parent=g6906.t1 #PROT g6906.t1 g6906 MVRVLLGGGTGFLGRALCDVLRARGHTVTVISRSAAAGGSIATVGQSIPVVTWSDIVATGLPEGTDAVINISGENVLNPLRLWNASFKDEIRKSRVDANKILRHAIDRAQKRPSVFVTASGVGFYRANTPDPQNESSTPGNDFMAQLCVDWEGAAEKDAVEMSPSSSPSAPRVVAVRLGVILGAGGGALASMLPSFRMGLGARLGSGEQWFPWIHIADAAAIFVHALENDKIRGPLCAVAPQRVTNGQFTAALAQAVHRWAFLFVPSFVLDVLFGGRERSTMLIDGINVMPLKTLESGYVFQFETIDAALKDLV* # PASA_UPDATE: g6911.t1, single gene model update, valid-1, status:[pasa:asmbl_3371,status:12], valid-1 NODE_204_length_31758_cov_41.5205 . gene 26994 31496 . - . ID=g6911;Name=g6911.t1 NODE_204_length_31758_cov_41.5205 . mRNA 26994 31496 . - . ID=g6911.t1;Parent=g6911;Name=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 31254 31496 . - . ID=g6911.t1.exon1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 31254 31496 . - 0 ID=cds.g6911.t1;Parent=g6911.t1;5_prime_partial=true NODE_204_length_31758_cov_41.5205 . exon 30918 31012 . - . ID=g6911.t1.exon2;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 30918 31012 . - 0 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 30559 30658 . - . ID=g6911.t1.exon3;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 30559 30658 . - 1 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 30274 30394 . - . ID=g6911.t1.exon4;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 30274 30394 . - 0 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 29543 29967 . - . ID=g6911.t1.exon5;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 29543 29967 . - 2 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 29248 29352 . - . ID=g6911.t1.exon6;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 29248 29352 . - 0 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 28910 29045 . - . ID=g6911.t1.exon7;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 28910 29045 . - 0 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 28326 28597 . - . ID=g6911.t1.exon8;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 28326 28597 . - 2 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 27835 28130 . - . ID=g6911.t1.exon9;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 27835 28130 . - 0 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 27433 27503 . - . ID=g6911.t1.exon10;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 27433 27503 . - 1 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . exon 26994 27269 . - . ID=g6911.t1.exon11;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . CDS 27118 27269 . - 2 ID=cds.g6911.t1;Parent=g6911.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 26994 27117 . - . ID=g6911.t1.utr3p1;Parent=g6911.t1 #PROT g6911.t1 g6911 ELADQLEDNEPAVAGSIKDDRKRQHYGNLFFMLQTRPSIMASLGPLVSLADIDSLLQTIMFTLYGNQYESREEHLLLQMFETALEHDFNTATEMAGLLRANTAVSRMMTTYTRRGPGQEYLKTCLSQRIQELIQSRDLNLEIDPAKIYEQMINDIETQTGQTCELPRVVSYEDAAANADVQKILQPRIDKLCEVTEAFLSTVVGSLENIPYGIRWLCKKIRSLMKQKYPEATEENFLSLVGGFYLLRFVNPAIVTPHSFMLIADKPSRSARRNLTLVAKLLQNLANKPNFKKEPYLTPLSEFTQKNAARLQSFLDKICDVEDFYDAVELDKYMYLSRKDLTINITLNEIYNVHSQLHKHIGELCADKSDHLCIILNDLGPAPEQLPRKDNRTVSLQLFSRWEEDAATDGPNDSRPGSSRDSRTVDPTSLLQVDTKALGLRVLRALRGVPPPTIDTMIAATQKSTNQWLVRMGQNISENVKSMSDQGFKETKALYDEIKLKFEGLPRLKEKVDGELKSLQNVYKNIVDHNNYLRQQLDAYKVYLQNVRSQAGSGTTLKSKDRLARGTTEHKRLVGPVRFNHVQLEKEGVIIESDVPENRRNNIYFNFSSPEPGLFVIALFYKGRDKAIVEMSLNLEDLLEKQHDNLQHLDLEYVQLNVNKTLHLLNKTFLKE* # PASA_UPDATE: g6902.t1, single gene model update, valid-1, status:[pasa:asmbl_3367,status:12], valid-1 NODE_204_length_31758_cov_41.5205 . gene 577 2100 . - . ID=g6902;Name=g6902.t1 NODE_204_length_31758_cov_41.5205 . mRNA 577 2100 . - . ID=g6902.t1;Parent=g6902;Name=g6902.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 2055 2100 . - . ID=g6902.t1.utr5p1;Parent=g6902.t1 NODE_204_length_31758_cov_41.5205 . exon 915 2100 . - . ID=g6902.t1.exon1;Parent=g6902.t1 NODE_204_length_31758_cov_41.5205 . CDS 915 2054 . - 0 ID=cds.g6902.t1;Parent=g6902.t1 NODE_204_length_31758_cov_41.5205 . exon 577 837 . - . ID=g6902.t1.exon2;Parent=g6902.t1 NODE_204_length_31758_cov_41.5205 . CDS 616 837 . - 0 ID=cds.g6902.t1;Parent=g6902.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 577 615 . - . ID=g6902.t1.utr3p1;Parent=g6902.t1 #PROT g6902.t1 g6902 MKIPFIIDTSTMTPSQRRLTLLICVSFFIAVGGYWLVRPMKMGVLVALVGLKYEPQAKFGTVLVLIPLLFMYNKLVAVLDNPRRLAYIVCVAYAGVFLAIATALSMPGIGLSNKVPNPDRWLGWITYWAIESYGSIIMPMFWSVAATLFKADSAALVYPTITIAAQLGAISGATLATYTKTFGFSTLFVTQAAFLGLVMMLTDAMFRIHNTASAPTTTTTTELESGGTGKPASTEHTPKPPPTGLFEGFRLIATQPYVTGILVVSTFSEVVATILDFQMMVLGEETYPEPERFSEFMGRFGQAVNVISLLFALTGTKVVINRFGLMFCLVAFPVCTGFLTVMVYLVPSLWVLFGGMVAIKALGYSLNSPAKEMLYIQTSKDIKFKAKSWIDMFGSRMAKGLGSLVNNTFRQDPAALLSYGSAVSAGFVAVWVYAAHYLGNENKRLVLSGELIS* # PASA_UPDATE: g6903.t1, single gene model update, valid-1, status:[pasa:asmbl_3360,status:3], valid-1 NODE_204_length_31758_cov_41.5205 . gene 2442 4309 . + . ID=g6903;Name=g6903.t1 NODE_204_length_31758_cov_41.5205 . mRNA 2442 4309 . + . ID=g6903.t1;Parent=g6903;Name=g6903.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 2442 2488 . + . ID=g6903.t1.utr5p1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . exon 2442 2615 . + . ID=g6903.t1.exon1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . CDS 2489 2615 . + 0 ID=cds.g6903.t1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . exon 2975 3108 . + . ID=g6903.t1.exon2;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . CDS 2975 3108 . + 2 ID=cds.g6903.t1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . exon 3228 3557 . + . ID=g6903.t1.exon3;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . CDS 3228 3557 . + 0 ID=cds.g6903.t1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . exon 3662 4309 . + . ID=g6903.t1.exon4;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . CDS 3662 4168 . + 0 ID=cds.g6903.t1;Parent=g6903.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 4169 4309 . + . ID=g6903.t1.utr3p1;Parent=g6903.t1 #PROT g6903.t1 g6903 MEERPVESQFVLRLPEPNAKRLRERLKSGAELGDDDVTIEFDAESRDGRVLIGGKGYAARLYDLPCIIESQKSLDGIHFYKTGDISQMLLCDDGAALSREGTYWPDGLTPPMRAAKALRFRPNEASSFLRPDAERLASDELVDREVARLLRADAMCTASHYYIPGDMPANQAGMAAAGAATVGVAEADVDMADADEEDDEDGRLSDTSNFGFDEPGEEGEDFPGGDDGDSENASSAGDDGDGDFDDGEGGDDPDECARDNSEHYSNADQFDGPDQLEEAAAAAQAASNVVVMNELRTRRADIAKQVTAAEDKLIRAQTELKGMHDLKLTKAATEKLEKKVKLALDEHSALTAKLQSIIDEMGGQG* # ORIGINAL: g6901.t1 original gene structure, not modified by PASA NODE_204_length_31758_cov_41.5205 AUGUSTUS gene 56 199 . + . ID=g6901;Name=g6901.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS mRNA 56 199 . + . ID=g6901.t1;Parent=g6901;Name=g6901.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 56 199 . + . ID=g6901.t1.exon1;Parent=g6901.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 56 199 . + 0 ID=cds.g6901.t1;Parent=g6901.t1 #PROT g6901.t1 g6901 PFVAVAADEHELVGDQVPGLPQSAAVKKAGINVKLKFGAPKSQVRAT* # PASA_UPDATE: g6905.t1, single gene model update, valid-1, status:[pasa:asmbl_3361,status:12],[pasa:asmbl_3364,status:12], valid-1 NODE_204_length_31758_cov_41.5205 . gene 8054 9981 . + . ID=g6905;Name=g6905.t1 NODE_204_length_31758_cov_41.5205 . mRNA 8054 9981 . + . ID=g6905.t1;Parent=g6905;Name=g6905.t1 NODE_204_length_31758_cov_41.5205 . exon 8054 8844 . + . ID=g6905.t1.exon1;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . CDS 8054 8844 . + 0 ID=cds.g6905.t1;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . exon 8932 9272 . + . ID=g6905.t1.exon2;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . CDS 8932 9272 . + 1 ID=cds.g6905.t1;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . exon 9349 9981 . + . ID=g6905.t1.exon3;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . CDS 9349 9911 . + 2 ID=cds.g6905.t1;Parent=g6905.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 9912 9981 . + . ID=g6905.t1.utr3p1;Parent=g6905.t1 #PROT g6905.t1 g6905 MEKATEGMEHSAMEPQDPNDANDTVDLGDGGDGGDGVYIAEELSAGRRVELPYKPEELKWDSEHCRNADGVYCYCGRDRNVHSGRAELACATCLNWFHVECVQCRTDGLLPFMLNYRFTCALCDSDGVERLSLFQPSWKDILITTFANLKVQYGDRQTFFNKKDHLCPFMDSHWATLCKGRSKTSTWAATVGSKLYSDDDKFESKGVRTAASPFALRNLNLHSLRPPPQSSVRVSQKRKQDTTTSTPVGVAGPKRARRTAPLQSGAEQPARHLGGADYPINRPQYSFYPAENDPLDKFRVREALPHGTAVVLSRSDKAAQLRLSDDLLTVTGERGKGYCTVRATQGVSVGTYFWEAIVRTPADCPEGHTRIGWGQRTANTQTPLGCDIYGYSYRDLSGTCFHQGKGRPYGQAYGNGDVVGMLIHLPDGNGAPFSRLPPPHDPSSWQAFTFKNRPFIQETHLPPQTPESFPGAYIEFFVNGVSQGIAFRDITQGTYFPAVSVYMGAMVETKFEPPFKFPPPSFTPAMAMSEAGLMGFASVVLEDVIAKVVELEAAAEDGSAIARL* # ORIGINAL: g6908.t1 original gene structure, not modified by PASA NODE_204_length_31758_cov_41.5205 AUGUSTUS gene 13301 15879 . + . ID=g6908;Name=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS mRNA 13301 15879 . + . ID=g6908.t1;Parent=g6908;Name=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 13301 13865 . + . ID=g6908.t1.exon1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 13301 13865 . + 0 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 14265 14473 . + . ID=g6908.t1.exon2;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 14265 14473 . + 2 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 14567 14651 . + . ID=g6908.t1.exon3;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 14567 14651 . + 0 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 14737 14843 . + . ID=g6908.t1.exon4;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 14737 14843 . + 2 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 14920 15054 . + . ID=g6908.t1.exon5;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 14920 15054 . + 0 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 15177 15270 . + . ID=g6908.t1.exon6;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 15177 15270 . + 0 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 15370 15515 . + . ID=g6908.t1.exon7;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 15370 15515 . + 2 ID=cds.g6908.t1;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 15610 15879 . + . ID=g6908.t1.exon8;Parent=g6908.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 15610 15879 . + 0 ID=cds.g6908.t1;Parent=g6908.t1 #PROT g6908.t1 g6908 MFILRALTSRLRLTTAPTPWLPYRELHSAAALFVRGGDGGGVTRRGAPGRPAGGHPSGRRREHRRNSVLNSSAEQRASPSRTGRMRSGKHLTPRGNPDPLAPRVDFETVKGMVRRHAETHAPQPPPPVDGLPATATFPLRVRKGDVAANAPRPDARGFSGLRLSAEVVKALGELQIVNPTQIQAGLVCWSGKTMAYGAPLIHRLRALEAAEGPVHVRNPRALVLVPSVELGAQVLCALRDVAKGAPLACVGAFGARSKLEEGSAFRNQLVDVVVGTPARVLHHIDEGSLSVSDIRFVALDEADTMLDDGFGEEVMDIIGPLIESQHAPAAREIDGAVRTDHTRPVQFVLACATFTGKLRLEIEDAFPGIEYATTGALHHAPGNLEHRFWRVIGRQGKIDALKRLAAVQMSGPTIVFCNTVSSCDWTYGILQAGANTVAKMHGDLPPKARRDAWDSFQRGDAGMLVCTDIAARGLDTMRAGHVIMADFPTTTADYLHRAGRAGRLGRRGRVTSILTKKDGARADAVQASCVHWLDCG* # PASA_UPDATE: g6909.t1, single gene model update, valid-1, status:[pasa:asmbl_3363,status:12], valid-1 NODE_204_length_31758_cov_41.5205 . gene 16254 24983 . + . ID=g6909;Name=g6909.t1 NODE_204_length_31758_cov_41.5205 . mRNA 16254 24983 . + . ID=g6909.t1;Parent=g6909;Name=g6909.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 16254 16467 . + . ID=g6909.t1.utr5p1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 16254 16581 . + . ID=g6909.t1.exon1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 16468 16581 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 16703 16817 . + . ID=g6909.t1.exon2;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 16703 16817 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 16902 16975 . + . ID=g6909.t1.exon3;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 16902 16975 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 17086 17242 . + . ID=g6909.t1.exon4;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 17086 17242 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 17393 17536 . + . ID=g6909.t1.exon5;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 17393 17536 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 17792 17916 . + . ID=g6909.t1.exon6;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 17792 17916 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 18076 18180 . + . ID=g6909.t1.exon7;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 18076 18180 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 18365 18513 . + . ID=g6909.t1.exon8;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 18365 18513 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 18629 18777 . + . ID=g6909.t1.exon9;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 18629 18777 . + 1 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 18917 19140 . + . ID=g6909.t1.exon10;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 18917 19140 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 19253 19330 . + . ID=g6909.t1.exon11;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 19253 19330 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 19480 19623 . + . ID=g6909.t1.exon12;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 19480 19623 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 19807 19914 . + . ID=g6909.t1.exon13;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 19807 19914 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 20008 20103 . + . ID=g6909.t1.exon14;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 20008 20103 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 20215 20401 . + . ID=g6909.t1.exon15;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 20215 20401 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 20575 20645 . + . ID=g6909.t1.exon16;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 20575 20645 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 20853 20962 . + . ID=g6909.t1.exon17;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 20853 20962 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 21223 21262 . + . ID=g6909.t1.exon18;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 21223 21262 . + 1 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 21443 21565 . + . ID=g6909.t1.exon19;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 21443 21565 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 21763 21834 . + . ID=g6909.t1.exon20;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 21763 21834 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 21973 22113 . + . ID=g6909.t1.exon21;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 21973 22113 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 22238 22374 . + . ID=g6909.t1.exon22;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 22238 22374 . + 0 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 22644 22693 . + . ID=g6909.t1.exon23;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 22644 22693 . + 1 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 22980 23100 . + . ID=g6909.t1.exon24;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 22980 23100 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 23375 23469 . + . ID=g6909.t1.exon25;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 23375 23469 . + 1 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 23654 23722 . + . ID=g6909.t1.exon26;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 23654 23722 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 23898 24203 . + . ID=g6909.t1.exon27;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 23898 24203 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . exon 24600 24983 . + . ID=g6909.t1.exon28;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . CDS 24600 24901 . + 2 ID=cds.g6909.t1;Parent=g6909.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 24902 24983 . + . ID=g6909.t1.utr3p1;Parent=g6909.t1 #PROT g6909.t1 g6909 MSNVNVVVRFRPQNSIENGKGGSMCVRFDDNKKTVVVEGGERGEANGPLTFTFDRVFDPTISQQQMYDFTAKAIVEDVLKGYNGTIFAYGQTGSGKTHTMEGPDIDDLKLKGMIPRIIENLFVYIASAPDDLEFSIRVSYFEIYLEKIKDLLDESKDNLQVHEDKGRGVYIKGLTEIYVGSPDEVMAIMRKGKSNRAVAATRMNADSSRSHSVIQIVVSQKNLQDGSAKSGRLSLVDLAGSEKVGKTGAEGQTLEEAKKINKSLSALGNVINSLTDTKASHIPYRDSKLTRVLQESLGGNSRTTIIINCSPSSYNAPETVSSLRFGARAKSIKNKARVNEELSAEELRRRWEDARKDVARLKGILAKAESELKVWRSGGTVAQAAWTSFASVADTDGGDDSPGPPAPLALPSSAVPAAAIAPVTPPASSLAEDERQEFIARENELVDEISEKDKMIADMRAELDVLRANKDGLDSFAKENANLAAEVSELQRRVDAILFENKELELTVESLNESKVALVTELASLKTALDAAHARLEDEGDSARDRAERVARMMESLDGQGQELEAREKQLRESLAESVSATVEEQAPPGPSVEELQAVQASLAAAELDLDRARQQVAHLEAQVESAVAAARQADRQRKDAEERADQLQTESQQMLGRMIEFESKAQIDEDNKTALVNLKKSLEDQIAAAKASHQKQLSDLREDLVTARAEADRLSCELSENHRAFDELQASNAQSRSLVEEQARKIIDMAKGMENRSRAELELEALKQATANQLKEFDQLKEALMTDLKNRCEKVIDLEISLDQSRDQYNQLLNSSANKAQQKKMAFLEKNLEQLTQVHQQLVNQNTQLKLDVAVAEKKLAARNSRIKHLEVLVQDAQEKLARQSARSRAETERLREQLAASKSLDARSRPFDWAPGAPVSANIAKPIRGGGRSGSFYLKSMMNTPSSIPEGPVAPPSNDASPSTPKPAAERPSSDSPMSFWELMTKRGGQSTPAPIAEEPSGSAGGGASLPSTPVAQASVTRRLLGAASTMSPAPASSPASQQQQQGQQQGQSSPGGPIARGSSSSSLGGRVPVTVVPGQPITLTPGATAMVYKASPVQVVPGDETGHASIHPRVLPTPPGNARSLPPSPRITPAPVPAPAPAPAPGAAPSASPATGQSSSGSASPVQSMGARVLPTPPTAQQQQRRLPQPPSADGGKQ* # ORIGINAL: g6907.t1 original gene structure, not modified by PASA NODE_204_length_31758_cov_41.5205 AUGUSTUS gene 11894 12820 . - . ID=g6907;Name=g6907.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS mRNA 11894 12820 . - . ID=g6907.t1;Parent=g6907;Name=g6907.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS exon 11894 12820 . - . ID=g6907.t1.exon1;Parent=g6907.t1 NODE_204_length_31758_cov_41.5205 AUGUSTUS CDS 11894 12820 . - 0 ID=cds.g6907.t1;Parent=g6907.t1 #PROT g6907.t1 g6907 MALIRHVRVVGSRNGVRFFASDAATRNPPPPPDNASKGGAPPARPLFGSFAAAWLQRPGRVQQQQPIPGSRPSPGQQGQGSAGQGAGLGLGLGRFPFGAPRPQQQSGSAANAQQSASSQQQQQQQQQQQQQQKQRSPLISTERLKEAVLQAQAAATIEAEARLAVDRARFAALALPNSKETHDVSVKSIPGQRRMFSEMFAESPLGRAPGLSGVHMLGRRLRKSKGLVQYVDVGLKFAVVVVAPQSLQNEVPNKKTQELLVNLHTFEATDQFLGDSRLSTMLEGRGLYVKEIYPPVKEAETSRAPSPA* # PASA_UPDATE: g6910.t1, single gene model update, valid-1, status:[pasa:asmbl_3370,status:12], valid-1 NODE_204_length_31758_cov_41.5205 . gene 24964 26578 . - . ID=g6910;Name=g6910.t1 NODE_204_length_31758_cov_41.5205 . mRNA 24964 26578 . - . ID=g6910.t1;Parent=g6910;Name=g6910.t1 NODE_204_length_31758_cov_41.5205 . five_prime_UTR 26478 26578 . - . ID=g6910.t1.utr5p1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . exon 26275 26578 . - . ID=g6910.t1.exon1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . CDS 26275 26477 . - 0 ID=cds.g6910.t1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . exon 26010 26114 . - . ID=g6910.t1.exon2;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . CDS 26010 26114 . - 1 ID=cds.g6910.t1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . exon 25647 25731 . - . ID=g6910.t1.exon3;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . CDS 25647 25731 . - 1 ID=cds.g6910.t1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . exon 24964 25483 . - . ID=g6910.t1.exon4;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . CDS 25040 25483 . - 0 ID=cds.g6910.t1;Parent=g6910.t1 NODE_204_length_31758_cov_41.5205 . three_prime_UTR 24964 25039 . - . ID=g6910.t1.utr3p1;Parent=g6910.t1 #PROT g6910.t1 g6910 MASADSLAVYRDAAERVAREAGAVIREAFSADKTVMTKAGSADLVTETDQRVEKIIIGTLAAQFPTHKFIGEESAAAGAVVELTDAETWIIDPLDGTTNFVHGFPFVAVSIGLTIAKQVVLGVVYNCILDEMYVGVVGCGATLNGRPLRTSRQTDISRVLLATEFGSNRTPARLSLIRDNMHTLAGEPAPVHGIRCLGSAALNMCMVARGGCDAYYEFGIHCWDICAGVAIVREAGGVVVDPAGGEIDIMAQKVLCAGTRDIVMAISAAIAQIPVPRD* # PASA_UPDATE: g7927.t1, single gene model update, valid-1, status:[pasa:asmbl_7023,status:12], valid-1 NODE_4147_length_2122_cov_43.6004 . gene 124 1391 . - . ID=g7927;Name=g7927.t1 NODE_4147_length_2122_cov_43.6004 . mRNA 124 1391 . - . ID=g7927.t1;Parent=g7927;Name=g7927.t1 NODE_4147_length_2122_cov_43.6004 . five_prime_UTR 1334 1391 . - . ID=g7927.t1.utr5p1;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . exon 1107 1391 . - . ID=g7927.t1.exon1;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . CDS 1107 1333 . - 0 ID=cds.g7927.t1;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . exon 524 744 . - . ID=g7927.t1.exon2;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . CDS 524 744 . - 1 ID=cds.g7927.t1;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . exon 124 236 . - . ID=g7927.t1.exon3;Parent=g7927.t1 NODE_4147_length_2122_cov_43.6004 . CDS 124 236 . - 2 ID=cds.g7927.t1;Parent=g7927.t1 #PROT g7927.t1 g7927 MAELKVISPVDGSVYVTRRLSTDEEIAQALDRARAAHKKWRDVPLKERMALCLRFVDCFVSHKDEIALELTHMMGRPISQTGGEVNGTADRARYMVSIAESALADVQVGERDGFVRFIRKDALGVILIIGAWNYPYLIAVNSVIPAILAGNAVILKQAAQTPLCSERFKQAFDEAGFPEGIFQVGW* # PASA_UPDATE: g2930.t1, single gene model update, valid-1, status:[pasa:asmbl_9201,status:12], valid-1 NODE_7536_length_429_cov_39.6441_potentialcontaminant . gene 1 429 . - . ID=g2930;Name=g2930.t1 NODE_7536_length_429_cov_39.6441_potentialcontaminant . mRNA 1 429 . - . ID=g2930.t1;Parent=g2930;Name=g2930.t1 NODE_7536_length_429_cov_39.6441_potentialcontaminant . exon 1 429 . - . ID=g2930.t1.exon1;Parent=g2930.t1 NODE_7536_length_429_cov_39.6441_potentialcontaminant . CDS 1 429 . - 0 ID=cds.g2930.t1;Parent=g2930.t1;5_prime_partial=true;3_prime_partial=true #PROT g2930.t1 g2930 LTVKDIPGQGVLPSFVAIAEPVTTGARDHFLLVNSDGYITGCTVNCLALCPELRVEDALDNNTHISALVPGYDETLAQKMATLSGASISLVSSANRDTDYGGLDATVWETAMSTGYSDVRVVRILTNEESGSQPPSHPTYDQV # PASA_UPDATE: g6513.t1, single gene model update, valid-1, status:[pasa:asmbl_5944,status:12], valid-1 NODE_3369_length_3611_cov_39.1768 . gene 182 3307 . + . ID=g6513;Name=g6513.t1 NODE_3369_length_3611_cov_39.1768 . mRNA 182 3307 . + . ID=g6513.t1;Parent=g6513;Name=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 182 235 . + . ID=g6513.t1.exon1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 182 235 . + 0 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 518 832 . + . ID=g6513.t1.exon2;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 518 832 . + 0 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 1218 1286 . + . ID=g6513.t1.exon3;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 1218 1286 . + 0 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 1769 2142 . + . ID=g6513.t1.exon4;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 1769 2142 . + 0 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 2588 2671 . + . ID=g6513.t1.exon5;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 2588 2671 . + 1 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 2950 3033 . + . ID=g6513.t1.exon6;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 2950 3033 . + 1 ID=cds.g6513.t1;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . exon 3202 3307 . + . ID=g6513.t1.exon7;Parent=g6513.t1 NODE_3369_length_3611_cov_39.1768 . CDS 3202 3307 . + 1 ID=cds.g6513.t1;Parent=g6513.t1 #PROT g6513.t1 g6513 MVSVGKYSADTGIMWTRSIVWSDGQSSTIPSDAVCVPTCVNGLCVKVSKGVSKCACTSAAWTGVRCSELVQDSVVAPKSSSKIVLIVAPVVVAVVALAAAALLLFAWRRKKRQIDLQEKQHRKVIDFRELDVVDLIGTGSFGDVYKARWRGTDVAVKRILPSKLRPDDSMIGVGVRASEEEGANNKNNNNNNKDDNHENDGKKRGAELKAHASDSNFMRNHVRSLHGAAATVHNTAGADAWSGADTLSGNAMGWGDRGRIAAFHDEISVMCSLRHPNIVLFMGSCELPNLALVTEYMARGSVQQLLCSSHCDIPWDTRLKMLMDACRGMLYLHKSEPPILHCDLKVCFLCSPLIRWTKRVA* # PASA_UPDATE: g6647.t1, single gene model update, valid-1, status:[pasa:asmbl_5184,status:12], valid-1 NODE_2888_length_4834_cov_37.2555 . gene 1 4212 . - . ID=g6647;Name=g6647.t1 NODE_2888_length_4834_cov_37.2555 . mRNA 1 4212 . - . ID=g6647.t1;Parent=g6647;Name=g6647.t1 NODE_2888_length_4834_cov_37.2555 . five_prime_UTR 4076 4212 . - . ID=g6647.t1.utr5p1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 3947 4212 . - . ID=g6647.t1.exon1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 3947 4075 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 3383 3480 . - . ID=g6647.t1.exon2;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 3383 3480 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 2769 2856 . - . ID=g6647.t1.exon3;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 2769 2856 . - 1 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 2341 2475 . - . ID=g6647.t1.exon4;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 2341 2475 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 1861 1944 . - . ID=g6647.t1.exon5;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 1861 1944 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 1376 1486 . - . ID=g6647.t1.exon6;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 1376 1486 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 901 1056 . - . ID=g6647.t1.exon7;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 901 1056 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 623 720 . - . ID=g6647.t1.exon8;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 623 720 . - 0 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 394 471 . - . ID=g6647.t1.exon9;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 394 471 . - 1 ID=cds.g6647.t1;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . exon 1 91 . - . ID=g6647.t1.exon10;Parent=g6647.t1 NODE_2888_length_4834_cov_37.2555 . CDS 1 91 . - 1 ID=cds.g6647.t1;Parent=g6647.t1;3_prime_partial=true #PROT g6647.t1 g6647 MASFKRKIDDGDDNDILKITPLGGGQEVGRSCVMLEFKGKKIMLDCGIHPAYTGLAALPYFDEVDPETIDLLLVSHFHLDHCAALPYFLSKTTFKGRVFMTHPTKAIYRWMLSDYVRVSNISVEDMLYDEKDLDRSMEKIETVDTHQIKEIDGVKFWCYNAGHVLGACMFMIEIAGVRVLYTGDFSRQEDRHLMAAEIPDIVPDILIVESTYGVQIHEPRAEREARFTGLVHDIVKRGGRCLLPVFALGRAQELLLILDEYWEDHPELHSIPIYYASSLAKKCMSVYQTYINHMNDRIRRQFAISNPFVFRHISSLRGMEQFEDVGPSVVMASPGMLQSGLSRELFEMWCEDRRNG # PASA_UPDATE: g13298.t1, single gene model update, valid-1, status:[pasa:asmbl_6873,status:12],[pasa:asmbl_6874,status:12], valid-1 NODE_4029_length_2318_cov_25.0785 . gene 1 2308 . - . ID=g13298;Name=g13298.t1 NODE_4029_length_2318_cov_25.0785 . mRNA 1 2308 . - . ID=g13298.t1;Parent=g13298;Name=g13298.t1 NODE_4029_length_2318_cov_25.0785 . five_prime_UTR 2252 2308 . - . ID=g13298.t1.utr5p1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . five_prime_UTR 2034 2045 . - . ID=g13298.t1.utr5p2;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 2252 2308 . - . ID=g13298.t1.exon1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 1979 2045 . - . ID=g13298.t1.exon2;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 1979 2033 . - 0 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 1656 1769 . - . ID=g13298.t1.exon3;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 1656 1769 . - 2 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 1389 1433 . - . ID=g13298.t1.exon4;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 1389 1433 . - 2 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 1122 1141 . - . ID=g13298.t1.exon5;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 1122 1141 . - 2 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 955 994 . - . ID=g13298.t1.exon6;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 955 994 . - 0 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 639 773 . - . ID=g13298.t1.exon7;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 639 773 . - 2 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 284 326 . - . ID=g13298.t1.exon8;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 284 326 . - 2 ID=cds.g13298.t1;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . exon 1 103 . - . ID=g13298.t1.exon9;Parent=g13298.t1 NODE_4029_length_2318_cov_25.0785 . CDS 1 103 . - 1 ID=cds.g13298.t1;Parent=g13298.t1;3_prime_partial=true #PROT g13298.t1 g13298 MIALRHPNIVLFMGASLAEPNIALVVEFMANGSLTDVFDRLTPSEFDWTLRLKFALDAAKGMEYLHSNSPPLLHLDLKSPNLLIDDRMRLKVSDFGLATLQRAKSENHAIGTLYWMAPELITGTDQLTGAADVYSYGIILWELMGRCLPYRYAAGMAPMLAMHVVRSHHRPMPLPESAPAPFVDL # PASA_UPDATE: g3955.t1, single gene model update, valid-1, status:[pasa:asmbl_6734,status:12], valid-1 NODE_3925_length_2509_cov_34.5546 . gene 258 2493 . + . ID=g3955;Name=g3955.t1 NODE_3925_length_2509_cov_34.5546 . mRNA 258 2493 . + . ID=g3955.t1;Parent=g3955;Name=g3955.t1 NODE_3925_length_2509_cov_34.5546 . five_prime_UTR 258 262 . + . ID=g3955.t1.utr5p1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 258 334 . + . ID=g3955.t1.exon1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 263 334 . + 0 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 698 796 . + . ID=g3955.t1.exon2;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 698 796 . + 0 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 1003 1094 . + . ID=g3955.t1.exon3;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 1003 1094 . + 0 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 1231 1293 . + . ID=g3955.t1.exon4;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 1231 1293 . + 1 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 1638 1776 . + . ID=g3955.t1.exon5;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 1638 1776 . + 1 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 2109 2189 . + . ID=g3955.t1.exon6;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 2109 2189 . + 0 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . exon 2310 2493 . + . ID=g3955.t1.exon7;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . CDS 2310 2318 . + 0 ID=cds.g3955.t1;Parent=g3955.t1 NODE_3925_length_2509_cov_34.5546 . three_prime_UTR 2319 2493 . + . ID=g3955.t1.utr3p1;Parent=g3955.t1 #PROT g3955.t1 g3955 MLAERKNSDEVYAIKVLKKDVILQDDDVDCTKTEKRVLMIANKHPFLTNLHSCFQTDDRLFFVMEYVNGGDLMFQIQRDRRFDEDRSRFYSAEIVSALQFLHDQGIIYRDLKLDNVLLDSDGHVKLADFGMCKENIIATATTTTFCGTPDYIAPEILREQPYGASVDWWSLGVLMYEMLAGQGA* # ORIGINAL: g13230.t1 original gene structure, not modified by PASA NODE_3010_length_4540_cov_42.3021 AUGUSTUS gene 2 2202 . + . ID=g13230;Name=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS mRNA 2 2202 . + . ID=g13230.t1;Parent=g13230;Name=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 2 367 . + . ID=g13230.t1.exon1;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 2 367 . + 1 ID=cds.g13230.t1;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 1088 1234 . + . ID=g13230.t1.exon2;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 1088 1234 . + 1 ID=cds.g13230.t1;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 1352 1974 . + . ID=g13230.t1.exon3;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 1352 1974 . + 1 ID=cds.g13230.t1;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 2168 2202 . + . ID=g13230.t1.exon4;Parent=g13230.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 2168 2202 . + 2 ID=cds.g13230.t1;Parent=g13230.t1 #PROT g13230.t1 g13230 NDKTGETRVRPPDVAGWEVVKRSSVNAFYYYLRRTGETTYDVPRPIIEEGDAKRQRLSSSEGGEGPSVCQGIGELRGGYFVPKHEEAAVVASHYNARRNRGIDERQHSGILHLRSFNNWTKSMLLKAFMPESASVLDMCCGKGGDLQKYRIGHVRAVVGFDVAAQSIEDCRGRYEGRHESGGGRGRMPFFGRFYVADCFGSDIFSGDFARESTNPREFDVTCCQFALHYAFESESRAHCALRNAAARLRPGGHFIGTVTCAEVLVHRARRAKDATGSGEFGNAICNVRFERVPAEEEPPSFGVRYFFRLEDAIDDCPEYVVPLDLLEQVGAKHGLRLLRDKCLNFLDNADRERVTREGEQLWGRMGVDPMSDAEREVAGYYRVFVFRKE* # ORIGINAL: g13231.t1 original gene structure, not modified by PASA NODE_3010_length_4540_cov_42.3021 AUGUSTUS gene 2930 4317 . - . ID=g13231;Name=g13231.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS mRNA 2930 4317 . - . ID=g13231.t1;Parent=g13231;Name=g13231.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 3436 4317 . - . ID=g13231.t1.exon1;Parent=g13231.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 3436 4317 . - 0 ID=cds.g13231.t1;Parent=g13231.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS exon 2930 3322 . - . ID=g13231.t1.exon2;Parent=g13231.t1 NODE_3010_length_4540_cov_42.3021 AUGUSTUS CDS 2930 3322 . - 0 ID=cds.g13231.t1;Parent=g13231.t1 #PROT g13231.t1 g13231 MYSAGSRGGPDSGARAGPSTAGVRENTRALYVVPGKRNATRGAQVSNSATAPNHLSFDAVASSFLARIRLEEQWAKTVGACFTKSRNDLTHILDSKKKKGDGWIDEALREFVGLTSSDRTSAPPSSLEDLLHSLSSVSSSGSESDVMKARKFIGAHNIFYFSIDATKEHIYARPETFLTSVGGTDLHSDAFESELKRCGIPPVKTLVDHLKNAGVDINRTRSRRNAYNSCKWAYCEDSPGKGDDHWSVGSVTNLKAFVENKLLELPREEQDRFKTRKQTRKQEWESVEALLFGKIPDAFLNAIELDGSSQLQAPTSELKVENLGRFFMELHENTKIRWSRPSGRDRILAAVNILQAAPALLKVHDAVQKLDESLEKTNSTYAAIIREAYTYLRELYDVDVIGDENVRLRKMRNLFRMNDRMGPQ* # ORIGINAL: g13444.t1 original gene structure, not modified by PASA NODE_2424_length_6334_cov_36.9443 AUGUSTUS gene 1 849 . - . ID=g13444;Name=g13444.t1 NODE_2424_length_6334_cov_36.9443 AUGUSTUS mRNA 1 849 . - . ID=g13444.t1;Parent=g13444;Name=g13444.t1 NODE_2424_length_6334_cov_36.9443 AUGUSTUS exon 606 849 . - . ID=g13444.t1.exon1;Parent=g13444.t1 NODE_2424_length_6334_cov_36.9443 AUGUSTUS CDS 606 849 . - 0 ID=cds.g13444.t1;Parent=g13444.t1 NODE_2424_length_6334_cov_36.9443 AUGUSTUS exon 1 411 . - . ID=g13444.t1.exon2;Parent=g13444.t1 NODE_2424_length_6334_cov_36.9443 AUGUSTUS CDS 1 411 . - 2 ID=cds.g13444.t1;Parent=g13444.t1 #PROT g13444.t1 g13444 MREKANNAFCGWCLKSTTELASCISEVTYNANKALCAAGFLGYLVVGEDGKQYATSTIYDTKKRTGSWEVEESEIKVALRQGETLTVPVTVQPNQCKNLDFYYLLDITGSMRGDLDNLKKLASTFTSTVSKLCNPTNPNPSGCSNSACANVGFGTFADKPISPIGYWRALQDADKVNFGDVPGQAFFKDQTSTTAFNYVFRNSLSLTAAGDGTAFTNA # PASA_UPDATE: g13445.t1, single gene model update, valid-1, status:[pasa:asmbl_4279,status:12],[pasa:asmbl_4280,status:12], valid-1 NODE_2424_length_6334_cov_36.9443 . gene 2034 6102 . + . ID=g13445;Name=g13445.t1 NODE_2424_length_6334_cov_36.9443 . mRNA 2034 6102 . + . ID=g13445.t1;Parent=g13445;Name=g13445.t1 NODE_2424_length_6334_cov_36.9443 . five_prime_UTR 2034 2069 . + . ID=g13445.t1.utr5p1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 2034 2257 . + . ID=g13445.t1.exon1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 2070 2257 . + 0 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 2541 2676 . + . ID=g13445.t1.exon2;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 2541 2676 . + 1 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 2924 3068 . + . ID=g13445.t1.exon3;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 2924 3068 . + 0 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 3331 4121 . + . ID=g13445.t1.exon4;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 3331 4121 . + 2 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 4381 4688 . + . ID=g13445.t1.exon5;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 4381 4688 . + 0 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 4859 4902 . + . ID=g13445.t1.exon6;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 4859 4902 . + 1 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 4995 5202 . + . ID=g13445.t1.exon7;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 4995 5202 . + 2 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 5430 5641 . + . ID=g13445.t1.exon8;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 5430 5641 . + 1 ID=cds.g13445.t1;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . exon 5855 6102 . + . ID=g13445.t1.exon9;Parent=g13445.t1 NODE_2424_length_6334_cov_36.9443 . CDS 5855 6102 . + 2 ID=cds.g13445.t1;Parent=g13445.t1 #PROT g13445.t1 g13445 MHICVCVFVVASLVVPAAEGLYRTQNGLLTDTLDASIDSTYVFTGGLSSERFGHSIAYQASKRNLIVGAPYASAAEPSNPTWDTSVERRGRVYTFPSLVKSGSNFVEPPTMCNYRSHFGASVAAGTGVDYSGFVASAPTCTSGRTTIPVYAPASSTTSGTEIQWGTACSAVSDGQFTKSGLSAGKYFTAATIPRYRKDIQIQLRADAGVDFDLYLDDADCVRSNGANCINAGTTTFTTSSRYRLVGFYQAAKNSGFRSQNGLPSNVDEFMNFTYGAAGDSYNPLSSPRLCAGCQSTPLRFYNGHIDTDNPCCGIDTSSQSATPSPCNYDTMTYRGVSIQYSGHYCPLGGANSRGSCLSDCVTSDMCQLKWDGYFCNRPATPQGTSSNVEWIKITGTTDRVLQLYPMAFTAGSTTGTYSFASPCQSSENGCTFAFLTISNRVAVDLQASSSYPAYSFDASGQTVAVDARGTIFIGSSNRPAGIARGYVETFSSTLTYAGTVELDTTGRDGLQLSTASITPNNIRYGEAMTTGKFFTDYDVVIGAPRTTRAASYSATATYNKNAFSGLVEIRSTTSSGSLTLAKWKAYGEQSGSSFGAALAIADFDGDGKNDLFVGAPTYIDTNVPDVGRVYVYLAPVNSNGAMNAVYSLYIKGSARGGRFGFAIANAGKTRGIKSPYEDIVISAPFAVKPNSAANEADHGAVYLYEGRSSPASSNYIVPTQTIYGDVSGGLLGFSLGSGATVASASGIMGGWAYVCVALS* # ORIGINAL: g10944.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 32571 34718 . - . ID=g10944;Name=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 32571 34718 . - . ID=g10944.t1;Parent=g10944;Name=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 34552 34718 . - . ID=g10944.t1.exon1;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 34552 34718 . - 0 ID=cds.g10944.t1;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 33486 34422 . - . ID=g10944.t1.exon2;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 33486 34422 . - 1 ID=cds.g10944.t1;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 33226 33270 . - . ID=g10944.t1.exon3;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 33226 33270 . - 0 ID=cds.g10944.t1;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 32864 32893 . - . ID=g10944.t1.exon4;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 32864 32893 . - 0 ID=cds.g10944.t1;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 32571 32684 . - . ID=g10944.t1.exon5;Parent=g10944.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 32571 32684 . - 0 ID=cds.g10944.t1;Parent=g10944.t1 #PROT g10944.t1 g10944 MRGSRLFGASVVALFAFCVSMALAAEADPNAQTFLVSNVAKLTDETFEESVSRENWFVEFFAPWCHFCKKLAPIWEEIAADLDASAEIDGVTVHVAQVDCTVSSVPCNKHDIRGYPTLLFFRDGVEKPLRYEGARDRAHLSEYARKAAGPVVTAVDSLKALGKIQKNAEVVFVYAGNPVGAAYASFSAVASDYFVTAGLAFARVADAALISVVAEGESPHIFALKDGGSVQFDGEFTEAAVRSFFVKERFPRVAHLEGASYNALWNRGSPTVMLVADPADARTTRHALDAFRTVAKEAAGTEQFAWMDGAYFSNKVRTTWSVAVSELPVVIYEAATHNGHAILRASQEELTEETIKQFVENVRSGKIEFTERSTGGIIGFFKSGLDEVNMAFQALYSEYPALAIMSVAFPAIMIFIIFLLPGPAGREKSD* # ORIGINAL: g10936.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 2855 6925 . + . ID=g10936;Name=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 2855 6925 . + . ID=g10936.t1;Parent=g10936;Name=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 2855 2918 . + . ID=g10936.t1.exon1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 2855 2918 . + 0 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 3092 3262 . + . ID=g10936.t1.exon2;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 3092 3262 . + 2 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 3377 3864 . + . ID=g10936.t1.exon3;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 3377 3864 . + 2 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 4035 4177 . + . ID=g10936.t1.exon4;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 4035 4177 . + 0 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 4374 4491 . + . ID=g10936.t1.exon5;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 4374 4491 . + 1 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 4660 4921 . + . ID=g10936.t1.exon6;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 4660 4921 . + 0 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 5099 5310 . + . ID=g10936.t1.exon7;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 5099 5310 . + 2 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 5523 5980 . + . ID=g10936.t1.exon8;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 5523 5980 . + 0 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 6410 6471 . + . ID=g10936.t1.exon9;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 6410 6471 . + 1 ID=cds.g10936.t1;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 6660 6925 . + . ID=g10936.t1.exon10;Parent=g10936.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 6660 6925 . + 2 ID=cds.g10936.t1;Parent=g10936.t1 #PROT g10936.t1 g10936 MDHPNPSHSSGTPFNPPNAPLDVEAKRVIDKLAAFVAKNGEKFEDLTRQKQKDNATFAFLTPGGLHNDYYRWRVRVETGELPDLPIGPTAPQSLAPPSQYAGHPPGPHSQGYAHAPQYAQPPQQQSYDEQHAPNAQYQQPQYQQQQYQQQQYQQQYQQQQQQQLHDYNSGVGGAPGGYHQPPPAPGPPQGVPQPLQYSSYQQQTQQHLARILSAQLPPDGAAELAGLTDAVIATCTKDSISAVKSWVLTNAHHAEPIVGYLCNRAASPHSPFEARLRILYIVNDVVYHAQRHRIDALLYALAAAIVALTTEAVAAAGSSGPDRDKVYKVVGIWESNSSFDPQTIQEIKQAIGLAPVDHSFSQHPPQHAPQYPHAAPPQAAPVPPPVGQWQQQQHGGFGAPGGFHGQPAFQQGPPPPANGVFVAQQTSILPAPVPPVHSHPPPQFVQPMPLPPPPVHIAQLPPMKPAGGLPRPYYELPAGLMVPAVRAEDPPYEPIDPLSMSIPPAADAVQSQRIEAAIDRFYKGLSTSSDTTSGTSGHIPQSGGAPLDADGWEKGLLDAFLRARRAAKSAVKRGARGRDRSRSRSRSRDGSRDRRDRSSRRSRSRSQSRSRSRSRDRRRSRSRSPRRSRRRSRSRSRSSVDRTASLAAPGIGFQLGRKQDGGDFHSGDVRPGLGSKPPPASNPLAGILFGGGSEQSPLLGAQGATHTQNDAQKGGAADAAKDDAIYAQFRKARSYVYRNEAPPAKKA* # ORIGINAL: g10935.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 1007 1427 . - . ID=g10935;Name=g10935.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 1007 1427 . - . ID=g10935.t1;Parent=g10935;Name=g10935.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 1364 1427 . - . ID=g10935.t1.exon1;Parent=g10935.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 1364 1427 . - 0 ID=cds.g10935.t1;Parent=g10935.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 1007 1185 . - . ID=g10935.t1.exon2;Parent=g10935.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 1007 1185 . - 2 ID=cds.g10935.t1;Parent=g10935.t1 #PROT g10935.t1 g10935 MASPRTINSPPRHSPSQFLPRGSHGDSFSSEGNMHMGGVPVGPYMIGVGVRLQPPPRRSPGGSGAAVNGEAASGMSRKGD* # ORIGINAL: g10937.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 . gene 7231 8948 . + . ID=g10937;Name=g10937.t1 NODE_108_length_39221_cov_57.4598 . mRNA 7231 8948 . + . ID=g10937.t1;Parent=g10937;Name=g10937.t1 NODE_108_length_39221_cov_57.4598 . five_prime_UTR 7231 7705 . + . ID=g10937.t1.utr5p1;Parent=g10937.t1 NODE_108_length_39221_cov_57.4598 . exon 7231 8948 . + . ID=g10937.t1.exon1;Parent=g10937.t1 NODE_108_length_39221_cov_57.4598 . CDS 7706 8548 . + 0 ID=cds.g10937.t1;Parent=g10937.t1 NODE_108_length_39221_cov_57.4598 . three_prime_UTR 8549 8948 . + . ID=g10937.t1.utr3p1;Parent=g10937.t1 #PROT g10937.t1 g10937 MPLWKWRSSVVVPADADTGMSVIGARMSDARRESASLEEAVLSPTSLVFDGELEKAYRTARVPVQMITHRWTAAFAFVFLAYFYYYASQSVSTLSPNVVDGYKRASPIYLGGSVYYVVVFCAGFTLPYQRLVEAGSHYTIILLIGIPIAFLAITGRWMAADGSYSGGLMIVIIGSVLTMEKFKPIACMCMLFLAAQVVQCLAGSDNTASQNVMVILPVGIVGLFSITACYVIDLGTRRLWIIQQTVLSSSDALRKEKEDAVRLLEAQLPLPVIEQLPHQR* # ORIGINAL: g10941.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 19681 25240 . + . ID=g10941;Name=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 19681 25240 . + . ID=g10941.t1;Parent=g10941;Name=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 19681 19779 . + . ID=g10941.t1.exon1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 19681 19779 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 20072 20221 . + . ID=g10941.t1.exon2;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 20072 20221 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 20497 20649 . + . ID=g10941.t1.exon3;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 20497 20649 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 21009 21110 . + . ID=g10941.t1.exon4;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 21009 21110 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 21326 21514 . + . ID=g10941.t1.exon5;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 21326 21514 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 21726 21849 . + . ID=g10941.t1.exon6;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 21726 21849 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 22125 22186 . + . ID=g10941.t1.exon7;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 22125 22186 . + 2 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 22433 22528 . + . ID=g10941.t1.exon8;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 22433 22528 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 22772 22966 . + . ID=g10941.t1.exon9;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 22772 22966 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 23200 23267 . + . ID=g10941.t1.exon10;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 23200 23267 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 23574 23727 . + . ID=g10941.t1.exon11;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 23574 23727 . + 1 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 23923 24021 . + . ID=g10941.t1.exon12;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 23923 24021 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 24226 24309 . + . ID=g10941.t1.exon13;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 24226 24309 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 24547 24652 . + . ID=g10941.t1.exon14;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 24547 24652 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 24883 25091 . + . ID=g10941.t1.exon15;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 24883 25091 . + 2 ID=cds.g10941.t1;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 25217 25240 . + . ID=g10941.t1.exon16;Parent=g10941.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 25217 25240 . + 0 ID=cds.g10941.t1;Parent=g10941.t1 #PROT g10941.t1 g10941 MADLRETIARLCRQREEVLGKWLAEPVPNKVNEMRAILERSCVTLTKLASAMANSDPQLDVVSREIADAYSICGYLVIPLFHLHRNFPLEEAKTTLHFANMALHYVPGNPLAHFVRAMAHAHRGNKAAYFMDVAAAANASPSEWNNVRYIPGLAHLDAIDRCEEAFSKGFVRSGQWRQLHVGATDRRHHRDLCGMHRIEPQRTPSCIPSPRAFPFVCVHKPSNTAYLFGGEAVNPPPGRPAMPSDECGMNDMHAFNMSTGAWRKITQRGRIPSPRSRGEFWIHHSTIFLFGGRCFINGDTEADSTTFAYDIEKSTWELVCKTSAKSEGPSARISAGGAYHNGSYFLFGGGSDHHEAVGDMWRFNCTERRWQRAAQEGIKPAARLEFGSGQARAGNLFVYGGKFGLEGTYYEPDQQRCVFEANLDGGAPYPWRRIVPTGLPSVPCQELESSGWEGFLFGGYWENHEQQQEMLVSDKGNVCVLHSSYYNTLTEYCGNGMFRLSFDKSGLAPCQRAGAVIFGSADKQIVYVFGGYTTYEPDRMSFLPAPIYFNDMWTFTTMADESVTPPATAIPATPAAPPVSSAKSTPAPSIPPSKKADSNPQSAPQSAPAPQGRPSESTGAASGDDGKKAKQLHDHAV* # ORIGINAL: g10943.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 30043 32027 . + . ID=g10943;Name=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 30043 32027 . + . ID=g10943.t1;Parent=g10943;Name=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 30043 30960 . + . ID=g10943.t1.exon1;Parent=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 30043 30960 . + 0 ID=cds.g10943.t1;Parent=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 31134 31220 . + . ID=g10943.t1.exon2;Parent=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 31134 31220 . + 0 ID=cds.g10943.t1;Parent=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 31323 32027 . + . ID=g10943.t1.exon3;Parent=g10943.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 31323 32027 . + 0 ID=cds.g10943.t1;Parent=g10943.t1 #PROT g10943.t1 g10943 MVYTKDTRGSDRGNDGAGRAMRKGGSWSASSTGGYGNGGGGYGGGASKGRFGFGQQQSQWTSSTRTGFSNDFNHSYDANPTFDVLSLPAFEKNFYKEHAEISNMSVAEVETFRKTNQMTIIGKNVPKPIRSFEEANFPKVITDTCVQQGFEKPTPIQAQGWTMALSGRDMVGIAQTGSGKTLSYILPALIHISAQPKLERGDGPIALVLAPTRELAVQIQEVANTFGTPARVRNTCVYGGAPKGPQIRDVQRGCEIVIATPGRLMDLIKMGKTTLRRVTYLVLDEADRMLDMGFEPQLREIVAQIRPDRQVLMWSATWPKEVQRLARDYLKDYIQVNIGSLQLSANKKIEQNIEVCDDSQKDDALVRILKETWKEETPVKTLIFCKTKFKCDELVYNLQAEGWPALAIHGDKMQNEREWVLDQFRSGEATIMVATDVAARGLDVKDIAQVINYDFPGSTEDYVHRIGRTARGSCETGRAYTFFTRGDRRQAGDLVGILVEAGQKVPAELEGMVDRRRFGFGGQGGQRGRWGSGGGGNSWNQKQGHGGNRSFGGQKSFGGGAGRGFSKAH* # ORIGINAL: g10942.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 27465 29397 . - . ID=g10942;Name=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 27465 29397 . - . ID=g10942.t1;Parent=g10942;Name=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 29281 29397 . - . ID=g10942.t1.exon1;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 29281 29397 . - 0 ID=cds.g10942.t1;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 28723 28966 . - . ID=g10942.t1.exon2;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 28723 28966 . - 0 ID=cds.g10942.t1;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 28372 28503 . - . ID=g10942.t1.exon3;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 28372 28503 . - 2 ID=cds.g10942.t1;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 27465 28150 . - . ID=g10942.t1.exon4;Parent=g10942.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 27465 28150 . - 2 ID=cds.g10942.t1;Parent=g10942.t1 #PROT g10942.t1 g10942 MTVPDNFEKVDFKSVKGGIAYDDVAANDVEMFLIRAPADFDPSALSGASFSLESGGVLHVDTQAADADPKKRKKKGRADQNAVDEFVLEPIASQGDGRSGLTEYSSFGTLLRASDGTLRMGKGFKGQINIVRRLSVPNVGKPMYVRTPVKQRTGLVQRWTPYGSRKPFKASPVASQPNTASQASPKKRKRADAEPDAEESAPVEAHVPSQAAQSAEPAAKSEHKKRKRDVVEAAPEAATPDAPTVKAHKGKGKAQSEDAAATNAVQAEQTKPKKATRGDVEKADVPVAPTADIAVAETKKKSSKVKAAADVSVAVLPVVEATAATAKPKKSKDKPREDIGAAAVIKGDAASDPSAPVAAEPSKGKAKKSKVGDEPAAVADSADKKPKPKKVK* # PASA_UPDATE: g10938.t1, single gene model update, valid-1, status:[pasa:asmbl_334,status:3], valid-1 NODE_108_length_39221_cov_57.4598 . gene 7235 12006 . - . ID=g10938;Name=g10938.t1 NODE_108_length_39221_cov_57.4598 . mRNA 7235 12006 . - . ID=g10938.t1;Parent=g10938;Name=g10938.t1 NODE_108_length_39221_cov_57.4598 . five_prime_UTR 11823 12006 . - . ID=g10938.t1.utr5p1;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . exon 11520 12006 . - . ID=g10938.t1.exon1;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . CDS 11520 11822 . - 0 ID=cds.g10938.t1;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . exon 9931 11244 . - . ID=g10938.t1.exon2;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . CDS 9931 11244 . - 0 ID=cds.g10938.t1;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . exon 7235 9763 . - . ID=g10938.t1.exon3;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . CDS 8942 9763 . - 0 ID=cds.g10938.t1;Parent=g10938.t1 NODE_108_length_39221_cov_57.4598 . three_prime_UTR 7235 8941 . - . ID=g10938.t1.utr3p1;Parent=g10938.t1 #PROT g10938.t1 g10938 MTTARSPIVAAPRSNAMLVALLVVGLVAFMQYSATFIKVYRAITIDAARHKANLEVMGLASLTRAVLKLSEEDAATSLLDAFPDESVTRRTGRRGLRHAMLDPNAREADECQPALSVVRAELPSPDRDFCHGIADIRGPRECTIRDDSAARRRNSARSAGLVGRDEAGSGDDGRYLLLHPYKRLFEVRPFFFRAENGMMEDSLKRSMTIVVQATLDRVYLHLLKLVTVWKGPVSIAVLLEGDEEQKFVAYMSKHKILRMWVDVHLVERHGHLRDDKGAFYPINALRNVALDNARTEWILVSDLDVMPNARMSIFLRSILKAESSYASLQKQDDSRCPGLVAYIPPAVELPFNVNYNISRSGMKSGVFYSKEDATTSLKSGQMRPMHTYFSLAYMPTRYGQWMEAKDIYEVPYSVRFEPYFIARRDMPRFNDSFVNRGGNFAQLVFHMHVAGYRFVVLPDVFVIDQPHDVIHRSPFVHHLATMWASFSEHVVAMYNFKLPEDSKASAYLPLKTKLADELRQFPGGVFDPRLALPDDASKTAIERPAFTLLVTSNDALWQQFEPVLLRFCQAHRMLWGIVILWNDPEDTLPMLDEQGSLAGCGKPVHFRVQLEGRITHAYRPSNIPREAPDCVLIVGRGEGWMLSLDLHQDELEFALDTWQTRREQIVGFRPAAAMLESGADDYDRKWRYVDGEDVLKGRKYNFIVSSPVLVHRRYFDAFFRLPREILRHVDVAHDCDDIALNFAVSHESLLPPAWVDTGSVRTPYIGESEDNPEMRAVRSKCIGVFMESFDANPLVDAQTVLRLDRLAPAAAV* # ORIGINAL: g10939.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 12853 15766 . + . ID=g10939;Name=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 12853 15766 . + . ID=g10939.t1;Parent=g10939;Name=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 12853 12909 . + . ID=g10939.t1.exon1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 12853 12909 . + 0 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 13205 13271 . + . ID=g10939.t1.exon2;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 13205 13271 . + 0 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 13649 13768 . + . ID=g10939.t1.exon3;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 13649 13768 . + 2 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 13951 14054 . + . ID=g10939.t1.exon4;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 13951 14054 . + 2 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 14439 14588 . + . ID=g10939.t1.exon5;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 14439 14588 . + 0 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 14914 15028 . + . ID=g10939.t1.exon6;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 14914 15028 . + 0 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 15262 15326 . + . ID=g10939.t1.exon7;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 15262 15326 . + 2 ID=cds.g10939.t1;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 15551 15766 . + . ID=g10939.t1.exon8;Parent=g10939.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 15551 15766 . + 0 ID=cds.g10939.t1;Parent=g10939.t1 #PROT g10939.t1 g10939 MIGQAAETVAHQAGTYWRAAAENSSIGWRRRPGLNGGRWLVLLRVDSFRDRFAAAAGADVQQAERAVSLKPCHVIPASADLVLANMSQARLTHTGNSHAQFFRIVSMATAVGLLIAACAVGTSLAMPASEGCISAPPAPAFNNSAYGGLWYEIGKIQTAGGGFFEKDCVCTIIDVAYTNSETGDGKVLNSCRKKTVDGSYLNATGTLSSENPQGKWYEGFFPLAPKVSYTIIFIGDDYAVEYDCGSTLGFVNYCIHILSRKPTMDQALFDRLIADSVALGLNTQNLPVQVTKQDGCW* # PASA_UPDATE: g10940.t1, single gene model update, valid-1, status:[pasa:asmbl_335,status:3], valid-1 NODE_108_length_39221_cov_57.4598 . gene 16190 19325 . - . ID=g10940;Name=g10940.t1 NODE_108_length_39221_cov_57.4598 . mRNA 16190 19325 . - . ID=g10940.t1;Parent=g10940;Name=g10940.t1 NODE_108_length_39221_cov_57.4598 . five_prime_UTR 19264 19325 . - . ID=g10940.t1.utr5p1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 19228 19325 . - . ID=g10940.t1.exon1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 19228 19263 . - 0 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 18861 19017 . - . ID=g10940.t1.exon2;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 18861 19017 . - 0 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 18508 18643 . - . ID=g10940.t1.exon3;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 18508 18643 . - 2 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 17926 18144 . - . ID=g10940.t1.exon4;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 17926 18144 . - 1 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 17351 17619 . - . ID=g10940.t1.exon5;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 17351 17619 . - 1 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 16937 17080 . - . ID=g10940.t1.exon6;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 16937 17080 . - 2 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 16708 16768 . - . ID=g10940.t1.exon7;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 16708 16768 . - 2 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . exon 16190 16372 . - . ID=g10940.t1.exon8;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . CDS 16213 16372 . - 1 ID=cds.g10940.t1;Parent=g10940.t1 NODE_108_length_39221_cov_57.4598 . three_prime_UTR 16190 16212 . - . ID=g10940.t1.utr3p1;Parent=g10940.t1 #PROT g10940.t1 g10940 MNAFIDIAEEQQALELAAYMSTLSEALSGLEQQSKALIAEGNFSALLTRFVENGAVLFTPAGDKEVEGPINTLTCLVRKAKAEDAVALYKGLGRIISSNTSDRPLMRLKLLTNLFNNVGAQSSARYDIYYSLIELAGACGRVDAILSEFSELSRWLDEWHATNEQRRVLFKLINKVLTANNRPTEAQEFLVKFLSTYEKTDDVKSVRAEAVACVVAAIADPAAFQLEGVLAIPAVAQLEGDIVHKLLGIFVSEGIDAYEQLHAENADAIAKLGLSHDDCRDKMRLLTLASIASEVSELKYATVAETMRIGREDVEEWIIKAIGSGLLEARLDQLNERVLISRSTHRTFSKAQWTYVKQRLGAWQTAMVDVFQVIRNARSQAHAALAKQQAGSA* # PASA_UPDATE: g10945.t1, single gene model update, valid-1, status:[pasa:asmbl_337,status:3], valid-1 NODE_108_length_39221_cov_57.4598 . gene 35074 38621 . + . ID=g10945;Name=g10945.t1 NODE_108_length_39221_cov_57.4598 . mRNA 35074 38621 . + . ID=g10945.t1;Parent=g10945;Name=g10945.t1 NODE_108_length_39221_cov_57.4598 . five_prime_UTR 35074 35373 . + . ID=g10945.t1.utr5p1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 35074 35415 . + . ID=g10945.t1.exon1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 35374 35415 . + 0 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 35566 35685 . + . ID=g10945.t1.exon2;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 35566 35685 . + 0 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 36047 36201 . + . ID=g10945.t1.exon3;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 36047 36201 . + 0 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 36473 36783 . + . ID=g10945.t1.exon4;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 36473 36783 . + 1 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 37072 37685 . + . ID=g10945.t1.exon5;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 37072 37685 . + 2 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 37959 38036 . + . ID=g10945.t1.exon6;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 37959 38036 . + 0 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . exon 38449 38621 . + . ID=g10945.t1.exon7;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . CDS 38449 38475 . + 0 ID=cds.g10945.t1;Parent=g10945.t1 NODE_108_length_39221_cov_57.4598 . three_prime_UTR 38476 38621 . + . ID=g10945.t1.utr3p1;Parent=g10945.t1 #PROT g10945.t1 g10945 MGDWWGFIATVKQKSEELFEQTKKDLGEFVAVVQHDTQEVVSSAAVAVQRDLGLGDDASGVETLARQQQERSYHVLGSLSSADDHDAVPLDRSEAALRAMRLHPTTYEVEPADAAAFSSWQSTFDLSSKTDEISRMLAGSAEVRAHHSRLVPSSVLTYALFWGRYYYRVHVFVEEEKRRLALVSRVHSSQDDIAWDDEADEADTTSAGKDTVSEDIKEDATPAVSHAAPTALPTEQTAAHITTAVGDSSTLSPPAIRTHTPPHSYTHALSPQTSSPVPERTHTPVLGEGVGNDPIPHTSSSGHATSAETTPAVSLSALSLADPTEAPTAAPVSPRAVPAPADFSHSVSAERENATEIDVAISPFDSTVFANAGEPAASAKPAAEDISAVRAQVFVLADRSSVDSSESQDPALSTPTNPTSESSQSTAFEIVAGQGRGLSSDDDWDSWE* # ORIGINAL: g10934.t1 original gene structure, not modified by PASA NODE_108_length_39221_cov_57.4598 AUGUSTUS gene 2 468 . + . ID=g10934;Name=g10934.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS mRNA 2 468 . + . ID=g10934.t1;Parent=g10934;Name=g10934.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS exon 2 468 . + . ID=g10934.t1.exon1;Parent=g10934.t1 NODE_108_length_39221_cov_57.4598 AUGUSTUS CDS 2 468 . + 2 ID=cds.g10934.t1;Parent=g10934.t1 #PROT g10934.t1 g10934 QQQQQQQQQQQQQQQQQQQQQQHRTQILEAADRIHAIDMKQHAITVIVREFPKVARRPKMRELKKSLLIDILEALSSRMEECTCDAGFPEEELKRRAASPPSLAHPAAHHVVAHPTVGHSRLVGTSTPPPNSIGSSSSSSSQQALSGGQGSVRR* # PASA_UPDATE: g2998.t1, single gene model update, valid-1, status:[pasa:asmbl_7825,status:12], valid-1 NODE_5045_length_1056_cov_32.2029_potentialcontaminant . gene 2 236 . + . ID=g2998;Name=g2998.t1 NODE_5045_length_1056_cov_32.2029_potentialcontaminant . mRNA 2 236 . + . ID=g2998.t1;Parent=g2998;Name=g2998.t1 NODE_5045_length_1056_cov_32.2029_potentialcontaminant . exon 2 236 . + . ID=g2998.t1.exon1;Parent=g2998.t1 NODE_5045_length_1056_cov_32.2029_potentialcontaminant . CDS 2 214 . + 0 ID=cds.g2998.t1;Parent=g2998.t1;5_prime_partial=true NODE_5045_length_1056_cov_32.2029_potentialcontaminant . three_prime_UTR 215 236 . + . ID=g2998.t1.utr3p1;Parent=g2998.t1 #PROT g2998.t1 g2998 FEENEPDVFERCRPKFWKTLTQTRNMRFWYEFLSKHPTCIPTTCECSDVGKSFDIRALEQRLGIKILTRV* # ORIGINAL: g874.t1 original gene structure, not modified by PASA NODE_4449_length_1602_cov_28.1297 AUGUSTUS gene 165 898 . + . ID=g874;Name=g874.t1 NODE_4449_length_1602_cov_28.1297 AUGUSTUS mRNA 165 898 . + . ID=g874.t1;Parent=g874;Name=g874.t1 NODE_4449_length_1602_cov_28.1297 AUGUSTUS exon 165 254 . + . ID=g874.t1.exon1;Parent=g874.t1 NODE_4449_length_1602_cov_28.1297 AUGUSTUS CDS 165 254 . + 0 ID=cds.g874.t1;Parent=g874.t1 NODE_4449_length_1602_cov_28.1297 AUGUSTUS exon 545 898 . + . ID=g874.t1.exon2;Parent=g874.t1 NODE_4449_length_1602_cov_28.1297 AUGUSTUS CDS 545 898 . + 0 ID=cds.g874.t1;Parent=g874.t1 #PROT g874.t1 g874 KQIDLYTTIVASKSVQEIVGCSSGRSFRAYLGDSNENPLTALVVLKKLCDHPRLVNKGMAYCEEIGVYAEASSDGQSGVPDTADTFDTPDGDGAPLLVDLDDKENCKGCVDRVSPAYVLDCMLPCSLVLDMDAGGDNGGGRGGSVIL* # PASA_UPDATE: g11305.t1, single gene model update, valid-1, status:[pasa:asmbl_1963,status:12],[pasa:asmbl_1964,status:13], valid-1 NODE_1559_length_10477_cov_38.7818 . gene 73 807 . + . ID=g11305;Name=g11305.t1 NODE_1559_length_10477_cov_38.7818 . mRNA 73 807 . + . ID=g11305.t1;Parent=g11305;Name=g11305.t1 NODE_1559_length_10477_cov_38.7818 . five_prime_UTR 73 73 . + . ID=g11305.t1.utr5p1;Parent=g11305.t1 NODE_1559_length_10477_cov_38.7818 . exon 73 807 . + . ID=g11305.t1.exon1;Parent=g11305.t1 NODE_1559_length_10477_cov_38.7818 . CDS 74 361 . + 0 ID=cds.g11305.t1;Parent=g11305.t1;5_prime_partial=true NODE_1559_length_10477_cov_38.7818 . three_prime_UTR 362 807 . + . ID=g11305.t1.utr3p1;Parent=g11305.t1 #PROT g11305.t1 g11305 SDEDIQLRMTGRMVNEAVYCLQESILNSASDGDIGAVFGLGFPPHLGGPFRFTDTFGAAKLVAQMEKYAAEHGKHFAPAPLLVDVAKSGSKFLKR* # PASA_UPDATE: g11307.t1, single gene model update, valid-1, status:[pasa:asmbl_1962,status:3], valid-1 NODE_1559_length_10477_cov_38.7818 . gene 7011 10421 . - . ID=g11307;Name=g11307.t1 NODE_1559_length_10477_cov_38.7818 . mRNA 7011 10421 . - . ID=g11307.t1;Parent=g11307;Name=g11307.t1 NODE_1559_length_10477_cov_38.7818 . five_prime_UTR 10304 10421 . - . ID=g11307.t1.utr5p1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . five_prime_UTR 9829 10135 . - . ID=g11307.t1.utr5p2;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . five_prime_UTR 9606 9620 . - . ID=g11307.t1.utr5p3;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 10304 10421 . - . ID=g11307.t1.exon1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 9829 10135 . - . ID=g11307.t1.exon2;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 9464 9620 . - . ID=g11307.t1.exon3;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 9464 9605 . - 0 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 9248 9342 . - . ID=g11307.t1.exon4;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 9248 9342 . - 2 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 8634 8993 . - . ID=g11307.t1.exon5;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 8634 8993 . - 0 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 8089 8332 . - . ID=g11307.t1.exon6;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 8089 8332 . - 0 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 7694 7856 . - . ID=g11307.t1.exon7;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 7694 7856 . - 2 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . exon 7011 7474 . - . ID=g11307.t1.exon8;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . CDS 7288 7474 . - 1 ID=cds.g11307.t1;Parent=g11307.t1 NODE_1559_length_10477_cov_38.7818 . three_prime_UTR 7011 7287 . - . ID=g11307.t1.utr3p1;Parent=g11307.t1 #PROT g11307.t1 g11307 MVWGTGTFGFADSDLSSFYSKFKVNNALSLLQHQGEAGTVGGDNFGEGTLDVTYISSIGQGVRTVVSNTDNSSSTEWSQGFGTALLAFTAALADQDDVPPVLSMSLGSLSWDSCNILCVKAVAALADPSTTYDTCIAYLQSQRQVCMYAESALMDRINDEFAKLGARGVTLLAATGDGGSHYSFQPFEETTALAKALNKVSCQYNFPTFPAGSPYVLGVGGTEWTNTTPDQPHGWYASGGSFDWRFPQPEYQAEAVRAYLKNTKGLPSAASYNASMRAYPDVAALANDVPMVFGGKTVAEGGTSAAAPAFAGLISLINDHRLNNGLKPLGFVAPRLYAAALAHPGELFYDVTVGNTNCAADHSCCDNGFPATSGWDPVTGLGSPLYDGLLKYLGTD* # ORIGINAL: g11306.t1 original gene structure, not modified by PASA NODE_1559_length_10477_cov_38.7818 AUGUSTUS gene 1482 6320 . + . ID=g11306;Name=g11306.t1 NODE_1559_length_10477_cov_38.7818 AUGUSTUS mRNA 1482 6320 . + . ID=g11306.t1;Parent=g11306;Name=g11306.t1 NODE_1559_length_10477_cov_38.7818 AUGUSTUS exon 1482 6320 . + . ID=g11306.t1.exon1;Parent=g11306.t1 NODE_1559_length_10477_cov_38.7818 AUGUSTUS CDS 1482 6320 . + 0 ID=cds.g11306.t1;Parent=g11306.t1 #PROT g11306.t1 g11306 MAESSIAVSTVELKPMSGGRVSVVARASTGQSGPFTAGGGSGGASVRAVRLVRFREPITDGGVSVPAETARHSNASSDARDGDGSSVDSLPGHAERRDGRRSGHTKMIACCGLSRDRTRLITGSRDSTMRVWNAETGSLLTERNVFGGIVRGHSEAVEAVAMSPSGTWCVSSSWDNTARVWDLELGTEVCRLKHATSSTSSGFSAVTFSPDGRLVGAASTDPRKSVAGVWDATTGELLTTLEGHTGHVQAMSFSPNGTRIVTGSRDGTCIVHQLRSNLHDLGPAGHVSTLVGHSEPIVACKYSPVQRGGGSRHSSIAATTDKRGSVVDAGAGGGTSDYASIVLTAALDGMLGVWDAATGALVRSLYGMDRGVKLHCDFSPDGSQVAGVSALGVFFLWDVASGAVIRRVDLVQMVSVNEMSHARGGAAQLSGHASGAASAGGARGIAVLAGSDRQAVSTSTGIVVVPATHAAGADGGGSGSSAQATAAVVAASIGVPLSIAFTTDGRRILIPLATDDYGLRLVDTQIEPVPLVKPHVKSVTACAFHPSGSRIISASVLGPVRVWDATTGADICELDGHTHSVMAVCVSVDGSRYVTASWDRLLMVWDAATGKRTGTLTGHEGQLSACALSPAHAGGRIVASGSSDSTVRIWDADSGICTAVLSGHKGAVNAVSFSHTGEYLASGSFDATIRVWNPVTRALLVTFHGHSSSVHALTFYPAALRGTGDLRDGLMSGSFAYVDDVGADMEDADAEPTFFVLASASTDRSVRLWSMSTRERNDSDATAVVSAEQVHVFEEAHLGTATSCAFSPAGSRLFTVGRDKTLKVWDLSDFSCEMAFKLPAEGECVSCFGGQPVASVALGTMRRRRMRATARRCDGALVAAVAMLDASVIVMDVTKRDPPLASMDLLIARSDVASLTRITAEYPHTVHVPLLDNRRTVVHRAAEQGKNDVLEVLLSARVPFILSLDADGLTAIDLAMARNLKTTVALLLRRAVDPPLPLHPSNAFALTRVVPKLILKWPDLATDLLRRLDTVSAPPLSSSLLDMYPCMPWSQHAANIAAAGEHYRTSSWKAQQQQRHNTQTLTAGLDEGDMLVRANGELNSTAQVWRDLIEAQESLQGGESADNAESGGGPLGADDGDEGGAAIALDEVLDDVTDDLSVHAMERRVPVLPCIVPLPFILGSDARYQVSGHPASSGLGGSSRLQHRLSRVSPGSLDAHSPQGFSHIGKRALTNSLLHVAARSNYEELFQTRIMEAVMQHKWASFGKRKFLFDLVFYAVFVGLYTAVTAVSVGKGITCQSSAYADDPGNGGDSPDYRGATGKVTLAFEVLMLLMAAWLFVVELVQMAKERLHYFSSLWNIIELAALCLVFAAVPLRALCVDAEPSLTSVATLLLWFRLLSFARGFKQTGVFVRMLFTIAKDLVFFFGILLLAILSFAHAFFLLGGGADDTGFGTWGTAVLNVYQMMFGSFDTEQLAYSTYPGLSRTLWGIFMVFVVIILLNVLIALLSNTFQRTMENAAVQWRMELASILIEYELGMTPKERAAHAPKWLHYAVTAADAQSNIRGGASSDDEGEAVETAKHREHVTRALESLSARIDQTSDALHALSRRMVKASE* # ORIGINAL: g13048.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 8837 16181 . - . ID=g13048;Name=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 8837 16181 . - . ID=g13048.t1;Parent=g13048;Name=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 11381 16181 . - . ID=g13048.t1.exon1;Parent=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 11381 16181 . - 0 ID=cds.g13048.t1;Parent=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 10700 11158 . - . ID=g13048.t1.exon2;Parent=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 10700 11158 . - 2 ID=cds.g13048.t1;Parent=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 8837 10578 . - . ID=g13048.t1.exon3;Parent=g13048.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 8837 10578 . - 2 ID=cds.g13048.t1;Parent=g13048.t1 #PROT g13048.t1 g13048 MQFSDINATFGALFSVHVTSEGIEQLGNPEGNFNLMVTLPDETPLPIWLYYNTSSSVLSGLVVLEDISTGTASLTLAVTAEGLGGYSASSPIHINFAQSTDVDFSSRFRFAGNLTSFSLGRRVLFIRRLWDFLLSTSLVESSGSDAVLGAISVPSNVRMLGLSSGSIIAEIGIIDNTVSVSIWKDVSSAIDESLKNGTLADALGESVLDFSVIAIAAESSTQTLTHTATLTVSLGRETSGTNLPTTPSTKTFEPTSSSPSPSPTAPCDLNSCGAGSECVACIGGDCQGTKFICIFSSSPLASTLASTLASTPMPIATSSDVQGDDSTTLSPSLTSVPASTPMEASASTSPSVSPPLAPCEPNPCGEAACVVCIGGNCKGESYICLTTASSPSMPTPTSSLSSTAEGEPSFTPAPSSTVVDDKMSTAPLSSFTPPLSSTGEGESSFTPAPSSTVMDDKTSSTPLSSFAPTLSSTAEGESSFTPAPSSTVEEDKSSTAAEDKTSSVPLSSFTPALSSTAEGESSLSPAPSSTAAEDKTSSAPFSSFTPVLSSTAEGESSFTPAPSSTVVVDKTSTAAEDKTSYAPLSSFTPAPSSTAEGESSFTPAPSSTVVDDKTSTATEDKTSSAPLSSFTPPLSSTAEGESSFTPAPSSTVVVDKTSTAAEDKSSSAPLSSVTPPLSSTAEGESSFTPAPSSTAAEDKTSTAPLPSFAPTLSSTAEGESSSPAPSSTVVEDKTSTAPLSSFTPELSSTAEGESSFTPAPSSTAAEDKTSSAPLSSFTPPPSSTVVDDMTSSAHFSSFTPPPSSTGEGESSFTLAPSSTVMDDKTSTAPLPSFAPTLSSTAEGESSFTPAPSSTVEEDKSSTAAEDKTSSVPLSSFTPALSSTAEGESSLSPAPSSTAAEDKTSSAPFSSFTPVLSSTAEGESSFTPALSSTVVDDKTSTAAEDKTSSAPLSSFTPPLSSTAEGESSFTPAPSSTAEGASSFMPAPSSTVVEEKTSSAPLSSFTPPLSSTAEGESSFTPAPSSTAEGDSSFTPAPSSTVMEDKTSSAPFSSFTPALSSTTEGESSFTPTRSSTVVVDKTSSAAEDRTSSAPLSSFTPAPSSTVVVDKTSTAAEDKTSSAPLSSFAPTLSSTAEGESSFTPAPSSTVVVDKTSTAAEDKSSSAPLTSFTPAPSSTVVDDMTSSAHFSSFTPALSSTAESDSSFTPAPSSTAAEVKTSTAPFSSFTPALSSTAEGESSFTPAPSSTVVVDKTSTAAEDKSSSAPPSSFTPPLSSTAEGESSFTPAPSSTVLHDKTSTAAEDKTSFAPFSSFTPPPSSTVVNDKTSSAPLSSFTPALSSTAEGESSFTPAPSSTVVDDKTSTPSEDKTSSAPLSSFTPPLSSTAEGESSFTPAPSSTVVDDKTSTAPLSSFRPELSSTAEGESSFTPALSSTVVDDKTSSTPVTSFTSAPSSTVEDDKTLSAPVSSFTPAPSSTVADESSLTPAPSSTSAVEATFTDLTSVVPLSSALTTSASAATSVSSIRPSDFVLSVTLSTIDSQLSATSAVTVVASSFSASSTAGLSMDTNSVGDGTVRTHSSSLLSSLSQDPTLMTAAPGIETTTAIGATSEPAAPWSCDGPVPSVLPYALNLCNGFVSTDTPFESTTAFNVSLIVQTTDSNASLAILKGVRAHAFNITLVHGEVVFTYMIGTMWRRLIWWRSSINDGAPHSIYAELMDGTGSLSVDGGEALIVEQSTIPLLQGPFTFYTAFNGTIAYAALGPFTFYTAFNGTIAYAALGGFSPSSFNVSAYSGNGTVTWTRPVVEIPFTGLPCDGPTPATLPDSLALCDGFISADTPFTSTTAFNVSLVVRTFDSDASLAILKGVRSHAFNVTLVDGKVVFNYVTGTLFRKLVWWRAPINDGKLHTVFAELVGGVGSLSVDGGDALVGQQSTSATLQGPFTFYTAFNGTIAYAALGGFSPSSFNVSAYSGNGTVTWTRPVVEIPFTGLPCDGPTPATLPDSLALCDGFISADTPFTSTTAFNVSLVVRTFDSDASLAILKGVRSHAFNVTLVDGKVVLSYNTGSIPRSVTWWRAPINDGKIHTVFAELVNGIGSLSVDGGEALTGKASSSGTLQGPFRMTTMLNGTIAYAQLGQYAAGDFNVTAYSGNATVVWVREDGGSAPVENGPACVSEAPPLLPSSLSLCEGGYVTAIPPFTQLTEFTTSLVVTTSNDTGILFSLIGSGADVLNVTLVGGKPKVSYNTGSGARSNVWWRTFINDGEPHVVTLDMMDGLVALSVDRLPAVRSTAPATGRRTLNGISLLHIGFHGSITIGKINGMGPSSFVITNWVSAVPVVDDAPAL* # ORIGINAL: g13049.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 16690 18511 . + . ID=g13049;Name=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 16690 18511 . + . ID=g13049.t1;Parent=g13049;Name=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 16690 17221 . + . ID=g13049.t1.exon1;Parent=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 16690 17221 . + 0 ID=cds.g13049.t1;Parent=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 17375 17530 . + . ID=g13049.t1.exon2;Parent=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 17375 17530 . + 2 ID=cds.g13049.t1;Parent=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 17862 18511 . + . ID=g13049.t1.exon3;Parent=g13049.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 17862 18511 . + 2 ID=cds.g13049.t1;Parent=g13049.t1 #PROT g13049.t1 g13049 MHTTHAASPQGFGSHGAIGGATDGEVDADASIRVDEGTEVSDGDNVVEASPSTSDEVATGMGVDTRVDARGDEDTQMNFVPWQSPPMHATHSDPASHGLGSQGAVCEGDGAGVKEDKDTYDDCASEDADSAGVLANDDDGADETHMYDLPLQSPPMHKTHSASPQGLGSHGSDGEDVGLGSQGSSNPVDGVAVSAGDEVASTGYSVVVTGSNAIELRMVDVGIYSAVDAVVAVGVGVGVGDDIAMQINPFSHPLRQIAHSSSPHGLGLQGSSCGEAVVVDVAVGGSVGDGDDAVVHMKPLSHPEMQTTHSFSPHGLGSHGSACGEVVAVGVGVGVGDDIAMQINPFSHPLRQIAHSSSPHGLGLQGSSCGEAVVVDVAVGGSVGDGDDAVVHMKPLSHPEMQTTHSFSPHGLGSHGSACGEAVDVGVGVDVGGDATVHMKPFSHP* # PASA_UPDATE: g13051.t1, single gene model update, valid-1, status:[pasa:asmbl_948,status:12],[pasa:asmbl_951,status:12], valid-1 NODE_124_length_37233_cov_46.1664 . gene 21806 25168 . - . ID=g13051;Name=g13051.t1 NODE_124_length_37233_cov_46.1664 . mRNA 21806 25168 . - . ID=g13051.t1;Parent=g13051;Name=g13051.t1 NODE_124_length_37233_cov_46.1664 . five_prime_UTR 25017 25168 . - . ID=g13051.t1.utr5p1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . exon 24929 25168 . - . ID=g13051.t1.exon1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . CDS 24929 25016 . - 0 ID=cds.g13051.t1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . exon 24632 24802 . - . ID=g13051.t1.exon2;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . CDS 24632 24802 . - 2 ID=cds.g13051.t1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . exon 24307 24519 . - . ID=g13051.t1.exon3;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . CDS 24307 24519 . - 2 ID=cds.g13051.t1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . exon 22840 24113 . - . ID=g13051.t1.exon4;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . CDS 22840 24113 . - 2 ID=cds.g13051.t1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . exon 21806 22664 . - . ID=g13051.t1.exon5;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . CDS 21894 22664 . - 0 ID=cds.g13051.t1;Parent=g13051.t1 NODE_124_length_37233_cov_46.1664 . three_prime_UTR 21806 21893 . - . ID=g13051.t1.utr3p1;Parent=g13051.t1 #PROT g13051.t1 g13051 MASSGTSHNFVIHGLVFAIIAFAFSLHSADALDPAAGWTDPCRANTCGAGEFCVICMSATCGKAYLCVNNNAGGSLASASLPVPSGTLPAATAPAVSVAAPTPTTAWIDPCASSPCGLGQYCALCMSGTCDRGYSCYNNAEVTSTPPSPTARPAVSSASTAGGKSSSPAPAASSATSTTCGDSMPPTLPRTVQFCANGNLATRTPFSALSSFNTTITIQTSSATGIVFSLRGAGWEGYNVTLVGGKPVLNYNTGSGARTAIWWRSFVNDSRPHTVYFELRNGVGTLSVDGLPSVSGASSTALSVDGIFQFYSSFLGRVTFGNIGTARVTDFVVTNWSRVKYLDILTTSAAPFASPSATAARVASTSSVRASATPLSSSAKPSSSSSRPSIGTVGASSSVRVASSSGNRVSSAAARSSPLAAVSSTGRPSAAGPSPSGVTCGDASPNLLPRAVQFCADGNLATRTPFNILSSFNTTITIQTSSATGIVFSLRGAGWEGYNVTLVGGKPVLNYNTGSGARTAIWWRSFVNDSRPHTVYFELRNGVGTLSVDGLPSVSGASSTALSVDGIFQFYSSFLGRVTFGNIGTFRMTDFVVTNWSGVKYLDLSAPSVAAPSPTAASSVRASTSLRASASATPVPSPLASSGKPSSSSVKAPAPVTSASAAAPSSTAAAQCSAARPPLLPAKFELCNRGFVVARTPFTSLVNFNATFVVQTAVNVSSGYLFSLRGSSWEGLNVTLDGSKPTLRYNTGNGVRTAPWWRTSINDGKPHTISLQLMRGIGSMVVDGLPAVYGANSTLLTVDGLTQFYSSFTGTLTLGKINSQNPSAFSIIDWGLVQSVQA* # ORIGINAL: g13046.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 99 4186 . - . ID=g13046;Name=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 99 4186 . - . ID=g13046.t1;Parent=g13046;Name=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 4062 4186 . - . ID=g13046.t1.exon1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 4062 4186 . - 0 ID=cds.g13046.t1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 1932 3802 . - . ID=g13046.t1.exon2;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 1932 3802 . - 1 ID=cds.g13046.t1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 1579 1755 . - . ID=g13046.t1.exon3;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 1579 1755 . - 2 ID=cds.g13046.t1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 978 1409 . - . ID=g13046.t1.exon4;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 978 1409 . - 2 ID=cds.g13046.t1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 617 729 . - . ID=g13046.t1.exon5;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 617 729 . - 2 ID=cds.g13046.t1;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 99 428 . - . ID=g13046.t1.exon6;Parent=g13046.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 99 428 . - 0 ID=cds.g13046.t1;Parent=g13046.t1 #PROT g13046.t1 g13046 MSRSNLPIQCILSPAFQDCLYLDFNGIIHNCTHANDAKVTVRSESEIMTRMFAYIEKVFEVAQPQKMLFIAVDGVAPRAKMNQQRQRRIRSSWGREKMRAGALAQGSLSGHTAEAIDGALDSNGITPGTEFMERVEEHMSYFIRRKMTDDVAWKKVKVVFSGHRTPGEGEHKIIDFIRRQKQDPHYNPNTRHCMYGLDADLIMLALSTHEPHFSLLREKVTFNSSRVPINAGDAKVELSGQRTNDFQFLHVGVLRDYLDMELGQTAADPAKNIPAVVYDLERTIDDFVTLCFLAGNDFIPHTLAADIDDKGLTPLFDLYRAHRTRETGYLVDATHVKLNIDLLQKIFDGLSKAEEEAARALLTKHARRLDVMLDVKSKKSGAAGAASGDVAASAPADASGASAAPTPTPTPTPIPIPTPILAAATPTVTASPAQPPTPSAWAKGAPRAPGTPQSAASATAMATPSTPTSNKPAPSTPSAPSAQANGTPSSQPAVPGGYPSLPAGYRPIDPAALFAHQQQIQMQQHYMQMQHQHMYGPAPPLHGAWIGQPPYAVHGHPMQMHSPMMPVMGPAGVVTGQPQAFYPHAHAHAHPVPPPQKDIKAEIFAMLGKAPDAAGNGPSTPATPAPASAPASTSGTGAAPASAAPMAEKNYRDEYHTLFLDGIKRGTPEHEDVCRKYLEGINWVMRYYFQGVPSWSWYYPYHAAPLPSDMLSLAQWSSDISFKKDDPCLPFEQLLAVMPIGSKTLLPAPLAKLMEGPLSDYYPTECEMILDAHGREYKDIPLIPFVDMTRVRAALATVAHELSAGENARNTSRQGTLFEGAGKAAKPTRVQRPSPSFDDVNVLVQERAFTLPPFSDKFRPGLLKGCLTGFMPPPAGFPSLRSMPVFPRLEAVGINIFGGSGKNQTMVLQVRDTSKQSALEAAKAPTIEPTDPADVKSLARAIEGARAAQLVRELLGSTCFVGYPYWVEATVTAVADEDHSWRVSRRGQVVAGPPIPDFAKAQESLRAHYLESQGID # PASA_UPDATE: g13054.t1, single gene model update, valid-1, status:[pasa:asmbl_953,status:12], valid-1 NODE_124_length_37233_cov_46.1664 . gene 30558 31669 . - . ID=g13054;Name=g13054.t1 NODE_124_length_37233_cov_46.1664 . mRNA 30558 31669 . - . ID=g13054.t1;Parent=g13054;Name=g13054.t1 NODE_124_length_37233_cov_46.1664 . five_prime_UTR 31631 31669 . - . ID=g13054.t1.utr5p1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . exon 31565 31669 . - . ID=g13054.t1.exon1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . CDS 31565 31630 . - 0 ID=cds.g13054.t1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . exon 31319 31461 . - . ID=g13054.t1.exon2;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . CDS 31319 31461 . - 0 ID=cds.g13054.t1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . exon 31113 31196 . - . ID=g13054.t1.exon3;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . CDS 31113 31196 . - 1 ID=cds.g13054.t1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . exon 30913 30989 . - . ID=g13054.t1.exon4;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . CDS 30913 30989 . - 1 ID=cds.g13054.t1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . exon 30558 30696 . - . ID=g13054.t1.exon5;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . CDS 30593 30696 . - 2 ID=cds.g13054.t1;Parent=g13054.t1 NODE_124_length_37233_cov_46.1664 . three_prime_UTR 30558 30592 . - . ID=g13054.t1.utr3p1;Parent=g13054.t1 #PROT g13054.t1 g13054 MARQLSLAIIKPDLCAHPIRTQAVLRTISASGFEVLLSRDLWWKREEAEHFYGEHKGRFFFERLVGYMSSGPMRALVLRKENAIKDWRLLLGPTHPMRARQTTPTCFRALYGISDTRNSLHGSDSPATAEREIKFFFPDAAIERDAEGDETVILRSQ* # ORIGINAL: g13050.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 18650 19066 . + . ID=g13050;Name=g13050.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 18650 19066 . + . ID=g13050.t1;Parent=g13050;Name=g13050.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 18650 19066 . + . ID=g13050.t1.exon1;Parent=g13050.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 18650 19066 . + 0 ID=cds.g13050.t1;Parent=g13050.t1 #PROT g13050.t1 g13050 MQINPFAHPLRQIAHSSSPHGLGSQGSCCGEAVNVDVGVGVGVGGDAVVHTKPLSHPEKQTTHSSSPHGLGSQGSSCGEVVGVGVGVGVGDDAVVHTKPFSHPEKQTTHSSSPHGLGSQGSKSVGVGVEDGDGVDKHT* # PASA_UPDATE: g13047.t1, single gene model update, valid-1, status:[pasa:asmbl_954,status:3], valid-1 NODE_124_length_37233_cov_46.1664 . gene 4709 8132 . + . ID=g13047;Name=g13047.t1 NODE_124_length_37233_cov_46.1664 . mRNA 4709 8132 . + . ID=g13047.t1;Parent=g13047;Name=g13047.t1 NODE_124_length_37233_cov_46.1664 . five_prime_UTR 4709 4865 . + . ID=g13047.t1.utr5p1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . exon 4709 4905 . + . ID=g13047.t1.exon1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . CDS 4866 4905 . + 0 ID=cds.g13047.t1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . exon 5140 5207 . + . ID=g13047.t1.exon2;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . CDS 5140 5207 . + 2 ID=cds.g13047.t1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . exon 5449 7746 . + . ID=g13047.t1.exon3;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . CDS 5449 7746 . + 0 ID=cds.g13047.t1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . exon 7976 8132 . + . ID=g13047.t1.exon4;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . CDS 7976 8071 . + 0 ID=cds.g13047.t1;Parent=g13047.t1 NODE_124_length_37233_cov_46.1664 . three_prime_UTR 8072 8132 . + . ID=g13047.t1.utr3p1;Parent=g13047.t1 #PROT g13047.t1 g13047 MRRRILYVGVASAEGTELLQTIRHSVREWDDAVAANHRTTAEIAAVTVSLSASSSRGFSVRSSGWSSSPAAQAVEEALDSFCDYDGDATTTPGLTQTHAEAHAVIARLDSALADAIAQLTNKACMEADHTGDRGNAPAVGNVSAIGVAGGKCSPPPISTALDVEWLWCGTPYAPESLPLCFALLHSLLAVSWLRPPVFFRMRLLSPVAGDNRKEECDRDGGSLFDSTRGAACTNEGAVSTTWMDLLCVHGVQSAPTTGSDIAWRGLMLSWAEEGHVPAGIIGGIECAWGNGADDGNIRGLSPSLAFSTCILPLRTIPASHVPMAVVGVDVGHLEMTLEAASPVCLFLDSVLSIPASTARCDAMGVKTERRGLLSRFVTVSETAERARNATGNATAKDGALALSDSFLFIESCSDIGVTGSASAQGGVDPPGCRYFRATVLDASAARVTDLLLLSCGLVGSQSLSRPTPAPTNFGRLRSLMASLLASPFLGERQRQLARSTRREELRLARKVTSAASVEPAAVGGRDARHLSSALSFGSSHSVGGTGAGLLTARSGSAALDAGSVAGATAGGVQGVSRAGGVRGRSRQARLLSTVKGLGALPGNGSGRFSDAGNDDVWYGADAGDGNGSDAGRVAGTRARGDGSHTWGPPSQSAPTVVLGSLNPRSEGDAVRRGRWTSQLGSRGDAPAALRSVAPSGGVGRHSIRASGADDDILMGLADDADDDDIMDDDSFLGDDAASVAASGRTALRGRTGGKSAALVASERTADGLCVQWVAQHVTGDVSPAVQATVLRLLRRMTRAAIESVHSGPIEMDQPSISAIIESLWPAVVRLHRV* # ORIGINAL: g13053.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 29206 30154 . - . ID=g13053;Name=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 29206 30154 . - . ID=g13053.t1;Parent=g13053;Name=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 30127 30154 . - . ID=g13053.t1.exon1;Parent=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 30127 30154 . - 0 ID=cds.g13053.t1;Parent=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 29668 29825 . - . ID=g13053.t1.exon2;Parent=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 29668 29825 . - 2 ID=cds.g13053.t1;Parent=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 29206 29352 . - . ID=g13053.t1.exon3;Parent=g13053.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 29206 29352 . - 0 ID=cds.g13053.t1;Parent=g13053.t1 #PROT g13053.t1 g13053 MSIQNLNTFDPFADAVNDEGLGGQSGHIHIRIQQRNGRKTLTTVQGISEDYDKKKLVKAFKKEFACNGTVVEHPEYGEVIQLQGDQRNHICEFLVKYDLAKKEQLKVHGF* # ORIGINAL: g13056.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 35290 37095 . - . ID=g13056;Name=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 35290 37095 . - . ID=g13056.t1;Parent=g13056;Name=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 36961 37095 . - . ID=g13056.t1.exon1;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 36961 37095 . - 0 ID=cds.g13056.t1;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 36542 36651 . - . ID=g13056.t1.exon2;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 36542 36651 . - 0 ID=cds.g13056.t1;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 36191 36234 . - . ID=g13056.t1.exon3;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 36191 36234 . - 1 ID=cds.g13056.t1;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 35820 35954 . - . ID=g13056.t1.exon4;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 35820 35954 . - 2 ID=cds.g13056.t1;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 35290 35570 . - . ID=g13056.t1.exon5;Parent=g13056.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 35290 35570 . - 2 ID=cds.g13056.t1;Parent=g13056.t1 #PROT g13056.t1 g13056 MYLPPTATLFQIKLLMGIVFASIACRAIYDFVELKDTVSVPFSASSNRVLDVKSFVLMTFWEIVPVFLIVMFFRRISATHWTQTPLLAHQRAQTIVGAGSLSHDRPPSLSLYGNSHRYDVEVDESSIASYTRSFQPRMYDPSLASRPFATPSLVSVPGRTIAQYMKPNVVANNPANVNDTTTNNNANNANKGNAAPANMSGNNLSSSMSHSYGSLTGSPAFWPHGSASCDEDIA* # ORIGINAL: g13055.t1 original gene structure, not modified by PASA NODE_124_length_37233_cov_46.1664 AUGUSTUS gene 32065 34460 . + . ID=g13055;Name=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS mRNA 32065 34460 . + . ID=g13055.t1;Parent=g13055;Name=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 32065 32550 . + . ID=g13055.t1.exon1;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 32065 32550 . + 0 ID=cds.g13055.t1;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 33262 33425 . + . ID=g13055.t1.exon2;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 33262 33425 . + 0 ID=cds.g13055.t1;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 33765 33855 . + . ID=g13055.t1.exon3;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 33765 33855 . + 1 ID=cds.g13055.t1;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 34089 34157 . + . ID=g13055.t1.exon4;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 34089 34157 . + 0 ID=cds.g13055.t1;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS exon 34314 34460 . + . ID=g13055.t1.exon5;Parent=g13055.t1 NODE_124_length_37233_cov_46.1664 AUGUSTUS CDS 34314 34460 . + 0 ID=cds.g13055.t1;Parent=g13055.t1 #PROT g13055.t1 g13055 MATQYDDQVSILGAESGRSHAELDITSIAMRTTDVVIINNPQHAPLPSSKPAKEFSGKTAATAATERFVPKPTFNKVPHNTRHFPYVSLGSVGLCAAWAYSWANCFVFLNFRLVDLDALGAVVALTVVGQLLFVPATVLIVRVMHTPPGASHQVPEFQEAYKECVLRMDHHCPWVNNCIGYRNFGLFVRMCFWSFAYSVYGSGLLLFAFIDGMIADRSERTSLMYQNMVFFFVGLVIAYLQGTLLYHCLRGLKSNTTFIERLNEMSATVEAPNPYHLGVLDNIRAVLGPRVRDWINPFASLPPMADGVKFRTNGHETS* # PASA_UPDATE: g13052.t1, single gene model update, valid-1, status:[pasa:asmbl_955,status:3], valid-1 NODE_124_length_37233_cov_46.1664 . gene 25632 28511 . + . ID=g13052;Name=g13052.t1 NODE_124_length_37233_cov_46.1664 . mRNA 25632 28511 . + . ID=g13052.t1;Parent=g13052;Name=g13052.t1 NODE_124_length_37233_cov_46.1664 . five_prime_UTR 25632 25658 . + . ID=g13052.t1.utr5p1;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . exon 25632 26725 . + . ID=g13052.t1.exon1;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . CDS 25659 26725 . + 0 ID=cds.g13052.t1;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . exon 27055 27233 . + . ID=g13052.t1.exon2;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . CDS 27055 27233 . + 1 ID=cds.g13052.t1;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . exon 27434 28511 . + . ID=g13052.t1.exon3;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . CDS 27434 28299 . + 2 ID=cds.g13052.t1;Parent=g13052.t1 NODE_124_length_37233_cov_46.1664 . three_prime_UTR 28300 28511 . + . ID=g13052.t1.utr3p1;Parent=g13052.t1 #PROT g13052.t1 g13052 MRRVSSLLRPTTPLLVRCVRQVTSSARVSASDESAQADKGPLTPPSPSSRPSLGALPFIPTPSQFRSSQATAEKASPATHVVLRRPPLGHVADKDAAVPTTSHVRDSAASNVEKDNASLDRRGALPFSGDVVRADNASHRNTSPVQALPQHSPRMFVAQHNTTHVPKQTGTDPSPTTSQRRPEHSRPNQYDTNTPRSQHHTSTYAYSKAQHPPLHSFAGEATLQSQPVLKPFNTDTEKLHNTPDLESTSLPPRDGPVTVAALNESALEWRNKMRAFGDGRVSLTFDGNGVAWITLENPSVRNAMSGRMMAELADAVDVLEKYDGRAVVLRGSAGFFCSGADLSVPESNTRPYGTGMTTLMRHTLRRFERLPLITVAAVEGGAVGGGAELATACDHRVVLSNAKIAFVQALMGVTCGWGGTARLMSIVGRQATLRILSSASAMTAAQCERLGLVDLVVEHSKHERDAAYASEGDFVSDTDPLGTAVHRFLLPLLSVPIDSLTATKAVVDAVANASSPFEASRKEGEVFLSLWGGRSHRAALIRVAAKRGATSSMAGGLSSTHDPAHRPGSTPAHAHAHAHAHAHAHAQQPPAHIAAARPQTHRLESSSPLVASRESLAREAQLSASAPTQSTSATKTALATDSSRSSGESRVTAPVNQRPVSAADAHVTEGSRRMSLPPYSPPQRSAPARPAEADRPIRPLLGK* # PASA_UPDATE: g14419.t1, single gene model update, valid-1, status:[pasa:asmbl_4566,status:12],[pasa:asmbl_4568,status:12], valid-1 NODE_2568_length_5851_cov_40.6179 . gene 3510 5778 . - . ID=g14419;Name=g14419.t1 NODE_2568_length_5851_cov_40.6179 . mRNA 3510 5778 . - . ID=g14419.t1;Parent=g14419;Name=g14419.t1 NODE_2568_length_5851_cov_40.6179 . exon 4651 5778 . - . ID=g14419.t1.exon1;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . CDS 4651 5778 . - 0 ID=cds.g14419.t1;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . exon 4199 4367 . - . ID=g14419.t1.exon2;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . CDS 4199 4367 . - 0 ID=cds.g14419.t1;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . exon 3510 3944 . - . ID=g14419.t1.exon3;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . CDS 3586 3944 . - 2 ID=cds.g14419.t1;Parent=g14419.t1 NODE_2568_length_5851_cov_40.6179 . three_prime_UTR 3510 3585 . - . ID=g14419.t1.utr3p1;Parent=g14419.t1 #PROT g14419.t1 g14419 MRAQFSNINSLCKPRPPTALNFLSRFQSDHLDIAKQAEEISRLRGIVLPDSRDSEVFTLFRRNKYEVRMSAASIELLVSFLQERNFMLLLSQMNQYVGVRTYEGRPQHETEADAPSGIVPSEAGHSQQDKALRSVHWGVVEEPGDAKGAPNALPPKDGGKPLVPVLPIRDFEKEGRLKAIRDARQRVSLGPASLPSACMYTFVNAHGRVNSLAIAEDASLISASMSDSTVRVWPIGTDPLRPLKDADRLSGVAVVNAEQDFDGRFRTFRSRLVDETKATAARTFVGHSGAVYASSFSADNRVLISGSEDGTARLWSMESLTNVVCYRGHNYPIWDVAFSPVETYFATASHDRTARLWSTEYVTPLRIFAGHLSDVDSVRFHPNSHYVATGSTDRTCRLWEVTSGDCVRVFTGHYGTVNTVAFSPDGKYLASAGEDRSIMIWDLGSGRRLKTLHGHDATVNSLSFSADGTILASGGSDYTVRLWDARASVLQSSSTKEDEDRDPRLRERGSPASAELLKTYMTKSTPVYNVTFTRKNLMLCAGVFVPPNQAQ* # PASA_UPDATE: g14418.t1, single gene model update, valid-1, status:[pasa:asmbl_4567,status:12], valid-1 NODE_2568_length_5851_cov_40.6179 . gene 100 3172 . + . ID=g14418;Name=g14418.t1 NODE_2568_length_5851_cov_40.6179 . mRNA 100 3172 . + . ID=g14418.t1;Parent=g14418;Name=g14418.t1 NODE_2568_length_5851_cov_40.6179 . five_prime_UTR 100 155 . + . ID=g14418.t1.utr5p1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 100 352 . + . ID=g14418.t1.exon1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 156 352 . + 0 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 478 547 . + . ID=g14418.t1.exon2;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 478 547 . + 1 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 832 926 . + . ID=g14418.t1.exon3;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 832 926 . + 0 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 1343 1445 . + . ID=g14418.t1.exon4;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 1343 1445 . + 1 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 1711 1819 . + . ID=g14418.t1.exon5;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 1711 1819 . + 0 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 2036 2070 . + . ID=g14418.t1.exon6;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 2036 2070 . + 2 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 2236 2440 . + . ID=g14418.t1.exon7;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 2236 2440 . + 0 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . exon 2642 3172 . + . ID=g14418.t1.exon8;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . CDS 2642 3006 . + 2 ID=cds.g14418.t1;Parent=g14418.t1 NODE_2568_length_5851_cov_40.6179 . three_prime_UTR 3007 3172 . + . ID=g14418.t1.utr3p1;Parent=g14418.t1 #PROT g14418.t1 g14418 MASRTNNPKDTLDDGDQSVEHTVVEHGVDDGKEDMSHEDHEDHDANGLSIDDGLVVTGESMRYAESIESTPDKVDGTDLLLKDDLADLKIPEMPAKRRRKVASDRNAPKPPLSGYQRFLVRARPALSAKHPEMAVADQIKQLGYIWSSLPQEEKQKYIDDAEEDKKRYAEEITKYQSSDHYRDYIDLKRHLGGGSSFFDDDDEDGDSGLSCTVCKLVFTSAHNKRAHVSGKRHQELVSAHAKKRKFHETVETDDAAPGFQVFTQQFLQYNKSRDDELRTLSKTCSLLEEQNGLLQKGMEQLKKTVSVLKADSRKMAAQNEAIRSMLANLRFTLTSLVAHVPPSAVPPSVNPESVEAFVARLRWIIARSEGNEAFFERVRDLIGGVDLRALDT* # PASA_UPDATE: g11091.t1, single gene model update, valid-1, status:[pasa:asmbl_4612,status:12], valid-1 NODE_2596_length_5755_cov_37.5354 . gene 4831 5725 . - . ID=g11091;Name=g11091.t1 NODE_2596_length_5755_cov_37.5354 . mRNA 4831 5725 . - . ID=g11091.t1;Parent=g11091;Name=g11091.t1 NODE_2596_length_5755_cov_37.5354 . exon 5347 5725 . - . ID=g11091.t1.exon1;Parent=g11091.t1 NODE_2596_length_5755_cov_37.5354 . CDS 5347 5725 . - 0 ID=cds.g11091.t1;Parent=g11091.t1 NODE_2596_length_5755_cov_37.5354 . exon 4831 5145 . - . ID=g11091.t1.exon2;Parent=g11091.t1 NODE_2596_length_5755_cov_37.5354 . CDS 5102 5145 . - 2 ID=cds.g11091.t1;Parent=g11091.t1 NODE_2596_length_5755_cov_37.5354 . three_prime_UTR 4831 5101 . - . ID=g11091.t1.utr3p1;Parent=g11091.t1 #PROT g11091.t1 g11091 MKKRKIVPGAPRAFDPSAPVREAPNPNSNSNSAPPPMPHRPSAPQLPMAGGYAPPPSQQYPQQHPQAGPPPYAPPGGMAPQGMPMSGYGAPNYVPGGYGAPMGYGAPQAQYGFAPQQYGIAPTAYQGNAWGAPNAHPYPR* # PASA_UPDATE: g11089.t1, single gene model update, valid-1, status:[pasa:asmbl_4611,status:12], valid-1 NODE_2596_length_5755_cov_37.5354 . gene 229 2892 . - . ID=g11089;Name=g11089.t1 NODE_2596_length_5755_cov_37.5354 . mRNA 229 2892 . - . ID=g11089.t1;Parent=g11089;Name=g11089.t1 NODE_2596_length_5755_cov_37.5354 . five_prime_UTR 2693 2892 . - . ID=g11089.t1.utr5p1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 2523 2892 . - . ID=g11089.t1.exon1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 2523 2692 . - 0 ID=cds.g11089.t1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 1660 2264 . - . ID=g11089.t1.exon2;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 1660 2264 . - 1 ID=cds.g11089.t1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 1331 1391 . - . ID=g11089.t1.exon3;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 1331 1391 . - 2 ID=cds.g11089.t1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 995 1153 . - . ID=g11089.t1.exon4;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 995 1153 . - 1 ID=cds.g11089.t1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 556 679 . - . ID=g11089.t1.exon5;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 556 679 . - 1 ID=cds.g11089.t1;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . exon 229 318 . - . ID=g11089.t1.exon6;Parent=g11089.t1 NODE_2596_length_5755_cov_37.5354 . CDS 229 318 . - 0 ID=cds.g11089.t1;Parent=g11089.t1;3_prime_partial=true #PROT g11089.t1 g11089 MAESPPSTTVDAKMDTTSSSSSSLAVHSSLAVARGASGASGASHSDNEFNPFNNSHGSLPKDDSDAESAGVTDAQPANAVAASTNTAPASSASAANSINSNNNSNNSSAVDKDAASTWELVDANAQQVSSAAPPSGVEDDRRRRPTWTESLGLRFGTSDTVRRASASASTGSASQPPTLQTHASQGSIRRNTNTSGGNAPWDTPHRRMERRNLLNVFKLAIKRLIESSVGHAGPVEDDNEPMQQLCVIVEHMLRHGVKDKKSMLGARREFWGYLESLDRIMPASEPAVNTIRNMSDIRTSLGKGRAWIRLAMMEKHLGDHFRTIADQKPLVGEWYEPYAMMVNDEASVAAGLMVGLNAIDFNLCLKGEDLDNQPDVIDYGLYLRDFHDGQKAPNAQGNLSSQQ # PASA_UPDATE: g11090.t1, single gene model update, valid-1, status:[pasa:asmbl_4610,status:3], valid-1 NODE_2596_length_5755_cov_37.5354 . gene 3104 4536 . + . ID=g11090;Name=g11090.t1 NODE_2596_length_5755_cov_37.5354 . mRNA 3104 4536 . + . ID=g11090.t1;Parent=g11090;Name=g11090.t1 NODE_2596_length_5755_cov_37.5354 . five_prime_UTR 3104 3215 . + . ID=g11090.t1.utr5p1;Parent=g11090.t1 NODE_2596_length_5755_cov_37.5354 . exon 3104 3355 . + . ID=g11090.t1.exon1;Parent=g11090.t1 NODE_2596_length_5755_cov_37.5354 . CDS 3216 3355 . + 0 ID=cds.g11090.t1;Parent=g11090.t1 NODE_2596_length_5755_cov_37.5354 . exon 3613 4536 . + . ID=g11090.t1.exon2;Parent=g11090.t1 NODE_2596_length_5755_cov_37.5354 . CDS 3613 4513 . + 1 ID=cds.g11090.t1;Parent=g11090.t1 NODE_2596_length_5755_cov_37.5354 . three_prime_UTR 4514 4536 . + . ID=g11090.t1.utr3p1;Parent=g11090.t1 #PROT g11090.t1 g11090 MVNVSVADYGTHPSGESVKQYTLSGANATVKIIEYGAIITSIAVPDGNGHFADVVLGFDDLNGYITGTRFFGAVCGRVANRIKNGRFELDGHAVQLSVNRPPHHLHGGNSGFDRKIWKSETVESNGVRLTCTSADGEEGYPGNVSVAVTYTLTDEGALSIDYEATADKATPINLTNHSYFNLAGKGHVLDHIVGIIADSYTPVDDTIVPTGEILPVAGTPFDLNEPRLVSDGIGKVGGKGYDHNYVLLKDASVSASEPQAFAVVMDPSSGRVLRASCTQPGVQFYTGNFLDASIVMRGGVPSEAHAGLCLETQHFPDSVNNSNFPSCIVRPGETYRHTTRFEFSWQ* # ORIGINAL: g2952.t1 original gene structure, not modified by PASA NODE_4769_length_1261_cov_44.9739_potentialcontaminant AUGUSTUS gene 35 1108 . + . ID=g2952;Name=g2952.t1 NODE_4769_length_1261_cov_44.9739_potentialcontaminant AUGUSTUS mRNA 35 1108 . + . ID=g2952.t1;Parent=g2952;Name=g2952.t1 NODE_4769_length_1261_cov_44.9739_potentialcontaminant AUGUSTUS exon 35 1108 . + . ID=g2952.t1.exon1;Parent=g2952.t1 NODE_4769_length_1261_cov_44.9739_potentialcontaminant AUGUSTUS CDS 35 1108 . + 0 ID=cds.g2952.t1;Parent=g2952.t1 #PROT g2952.t1 g2952 MLGTLSVAAYCIVNHDDGFTVGEFVAVQAYVLTIFTPLSMLGSIYTIIINSIVDIQNLAEILDEKPDIEDKPSAVDFKKVNPNPESVGIEFKNVRFRYPSQPEGGGIKGINFSVPPGTTTAIVGETGSGKTTVSRLLFRFYDLLSGDITLNNISIKDMTQKSLRQSIGVVPQDTVMFNDTVAYNIKYGRLDATQAEVEDAATKAQVHRFIGNLEKNYETMVGERGLKLSGGEKQRLAIARCLLKNPPIVLLDEATSALDNKTEREVQKALQCLAGRTTLVIAHRLTTIRHAEQILVMRQGEIVERGTHDELLAKGPEGYYHSMWNSQLVEGDGKGDGTPPPELTSPKSNDDVLNSPQ* # ORIGINAL: g2500.t1 original gene structure, not modified by PASA NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS gene 3971 4867 . - . ID=g2500;Name=g2500.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS mRNA 3971 4867 . - . ID=g2500.t1;Parent=g2500;Name=g2500.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS exon 3971 4867 . - . ID=g2500.t1.exon1;Parent=g2500.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS CDS 3971 4867 . - 0 ID=cds.g2500.t1;Parent=g2500.t1 #PROT g2500.t1 g2500 MAATITILDEPIQPFNTSNFPTDVNGRAISRDEYATAIHKTSYDAFYPFLSEDERRDTILRVLTASEVTAILELHSLSRYRSLNDNDVVERLERLVTDLSMINGDWFVRLSECSPKDAQGGCLVRSGIDVVHRIASSFRCATALRTGLQSVVLKKWRDCLDSKSPASDYGKWEFRTFVCNGKVTAASQYYCHTGFDWNGVDLNAVVTKTIAVVDRLRAAGFPEQDYVLDVYCPPYRTEAEVIELNPFGMELSSGSALFDWQRDVDQLYGGTDRRATGTDRRATTVLCLMARTAAPPRC* # ORIGINAL: g2499.t1 original gene structure, not modified by PASA NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS gene 315 455 . + . ID=g2499;Name=g2499.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS mRNA 315 455 . + . ID=g2499.t1;Parent=g2499;Name=g2499.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS exon 315 455 . + . ID=g2499.t1.exon1;Parent=g2499.t1 NODE_2728_length_5304_cov_41.7912_potentialcontaminant AUGUSTUS CDS 315 455 . + 0 ID=cds.g2499.t1;Parent=g2499.t1 #PROT g2499.t1 g2499 ILFREVDLVSSQSARFLHHSHTSGQFEFAKFDASAARATDRSHSTA* # PASA_UPDATE: g1575.t1, single gene model update, valid-1, status:[pasa:asmbl_7411,status:12], valid-1 NODE_4521_length_1509_cov_34.2901 . gene 262 1262 . - . ID=g1575;Name=g1575.t1 NODE_4521_length_1509_cov_34.2901 . mRNA 262 1262 . - . ID=g1575.t1;Parent=g1575;Name=g1575.t1 NODE_4521_length_1509_cov_34.2901 . five_prime_UTR 1262 1262 . - . ID=g1575.t1.utr5p1;Parent=g1575.t1 NODE_4521_length_1509_cov_34.2901 . exon 1097 1262 . - . ID=g1575.t1.exon1;Parent=g1575.t1 NODE_4521_length_1509_cov_34.2901 . CDS 1097 1261 . - 0 ID=cds.g1575.t1;Parent=g1575.t1;5_prime_partial=true NODE_4521_length_1509_cov_34.2901 . exon 747 971 . - . ID=g1575.t1.exon2;Parent=g1575.t1 NODE_4521_length_1509_cov_34.2901 . CDS 747 971 . - 0 ID=cds.g1575.t1;Parent=g1575.t1 NODE_4521_length_1509_cov_34.2901 . exon 262 379 . - . ID=g1575.t1.exon3;Parent=g1575.t1 NODE_4521_length_1509_cov_34.2901 . CDS 262 379 . - 0 ID=cds.g1575.t1;Parent=g1575.t1;3_prime_partial=true #PROT g1575.t1 g1575 FFVRAFSQWLSQYQGLISAQRGASGPVGGHEQQRKLFYSLVSDIVDVAVGSLSVELPATVCEAAANVLVALSSTVRVPSLVSLPRMAALCDGGAHALASSLRSDQAVSAVLRAVASALVLPWAETRDSEQEWELRRGRFRQFIGPIIQAYCKLPLMPGFADQKLYMLEN # PASA_UPDATE: g14029.t1, single gene model update, valid-1, status:[pasa:asmbl_6518,status:3], valid-1 NODE_376_length_25502_cov_40.7694 . gene 20090 23836 . + . ID=g14029;Name=g14029.t1 NODE_376_length_25502_cov_40.7694 . mRNA 20090 23836 . + . ID=g14029.t1;Parent=g14029;Name=g14029.t1 NODE_376_length_25502_cov_40.7694 . five_prime_UTR 20090 20247 . + . ID=g14029.t1.utr5p1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 20090 20545 . + . ID=g14029.t1.exon1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 20248 20545 . + 0 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 20746 20925 . + . ID=g14029.t1.exon2;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 20746 20925 . + 2 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 21235 21948 . + . ID=g14029.t1.exon3;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 21235 21948 . + 2 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 22168 22226 . + . ID=g14029.t1.exon4;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 22168 22226 . + 2 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 22432 22562 . + . ID=g14029.t1.exon5;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 22432 22562 . + 0 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 23070 23202 . + . ID=g14029.t1.exon6;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 23070 23202 . + 1 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . exon 23434 23836 . + . ID=g14029.t1.exon7;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . CDS 23434 23604 . + 0 ID=cds.g14029.t1;Parent=g14029.t1 NODE_376_length_25502_cov_40.7694 . three_prime_UTR 23605 23836 . + . ID=g14029.t1.utr3p1;Parent=g14029.t1 #PROT g14029.t1 g14029 MEQIAGAGGPATAGRSRGASLAIGRMGGGTHPHAHGSADSAMPPSPRCEGMLQKWTNYVSGWQPRFVVLGDGTLSYFLSRSEALQSSRGSINVANATVKVHPTDGCRFDIETAYISLYFRAQSTSDRQRWLVALGSTKALSDHGKMDGVQTDAAAPRQRGASSNGSASAASRAASLPDVSLDDVRAELATCRLILETQAMSLDRRLGRLAAELSPLRLSPEGAELLQKLSPGDSVADEALVLSATCNTFLQALGDCVRLLELQERHVSEVCAASAGGAPMIQRRGSAPVFRENSLPLAAVPPSSERAESSAAMSTAGHTGGNPASGGSEGSGGRGDGDGDRLSFSGSDYDTHVTAAPQGPPTFFSGMEFKFTELRITQEGIPTVPFLKCAAAMLPILDKLGSTAFAPVKADINGNIRKLQGRYDFDPVANATLELMVRHEIMTSTTSARNSATDALLWLKRALEFVNQFLIHVLSGADSLTTAASKAYELTLSQYHGWIVRGVFSLAVRAVPTKDSFFAALGPTEDAVIADMASFAGGLSGIISSLASFYNDNNLDSNAKV* # ORIGINAL: g14028.t1 original gene structure, not modified by PASA NODE_376_length_25502_cov_40.7694 AUGUSTUS gene 16372 19594 . - . ID=g14028;Name=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS mRNA 16372 19594 . - . ID=g14028.t1;Parent=g14028;Name=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 19527 19594 . - . ID=g14028.t1.exon1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 19527 19594 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 19183 19342 . - . ID=g14028.t1.exon2;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 19183 19342 . - 1 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 18978 19034 . - . ID=g14028.t1.exon3;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 18978 19034 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 18745 18856 . - . ID=g14028.t1.exon4;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 18745 18856 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 18369 18418 . - . ID=g14028.t1.exon5;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 18369 18418 . - 2 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 17958 18077 . - . ID=g14028.t1.exon6;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 17958 18077 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 17672 17733 . - . ID=g14028.t1.exon7;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 17672 17733 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 17144 17380 . - . ID=g14028.t1.exon8;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 17144 17380 . - 1 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 16836 16896 . - . ID=g14028.t1.exon9;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 16836 16896 . - 1 ID=cds.g14028.t1;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 16372 16632 . - . ID=g14028.t1.exon10;Parent=g14028.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 16372 16632 . - 0 ID=cds.g14028.t1;Parent=g14028.t1 #PROT g14028.t1 g14028 MDQISIECVSQVDREVLLEEALRYAQSRARLCTDEIDAYEGRVAQLGAVLASFVREGEAEVERTASHLQHLMCMRQNTFELDALSALDHVIASERQRLVFIEGECARRVQLFREAEWRMCPAVTLRLGNSATAPYAADAVNEHIRVQLVENTLFGLLAAKVEAERRLSSVESAYTTVRKELGRCKGQLQESRDQCEQLEADLRHVQRRQHGRQSAIDDQAARTPRMLSVRAHGTAASRHGYEGYAGHVTGCALCAANPFASDAEPSLFHADPAALVCFDTYSPYCGHSGGSSGDELRELSIDAPKPPPKTPRRRSPHQPSPSFDSPVIGRRKSGSMAPPASALRRARATGVPGRPLSSYGPFLRRLIIVLRSLRRLWFWLIRALAVVFVPTSLVR* # PASA_UPDATE: g14024.t1, single gene model update, valid-1, status:[pasa:asmbl_6516,status:12], valid-1 NODE_376_length_25502_cov_40.7694 . gene 85 1522 . + . ID=g14024;Name=g14024.t1 NODE_376_length_25502_cov_40.7694 . mRNA 85 1522 . + . ID=g14024.t1;Parent=g14024;Name=g14024.t1 NODE_376_length_25502_cov_40.7694 . five_prime_UTR 85 86 . + . ID=g14024.t1.utr5p1;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . exon 85 136 . + . ID=g14024.t1.exon1;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . CDS 87 136 . + 0 ID=cds.g14024.t1;Parent=g14024.t1;5_prime_partial=true NODE_376_length_25502_cov_40.7694 . exon 332 518 . + . ID=g14024.t1.exon2;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . CDS 332 518 . + 1 ID=cds.g14024.t1;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . exon 660 821 . + . ID=g14024.t1.exon3;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . CDS 660 821 . + 0 ID=cds.g14024.t1;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . exon 1093 1522 . + . ID=g14024.t1.exon4;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . CDS 1093 1467 . + 0 ID=cds.g14024.t1;Parent=g14024.t1 NODE_376_length_25502_cov_40.7694 . three_prime_UTR 1468 1522 . + . ID=g14024.t1.utr3p1;Parent=g14024.t1 #PROT g14024.t1 g14024 NPFVDKYAAKLALKRRLAEAASGDKSKPVEVENKIADYFDSQRPGYAHYIQPSLVSPADEAQEVRPTIRGADGLPSTVPALNDIMCTDKLADATPEMISQLWVKYHIDKKCVSAAIPSGTYQRMHMRASECPLFVYPLPREDGYEMFLGQFSGHQCFFTGLLEYKSRQESATPRLTLTHYVNFRDTKGLVLMVGHCQDPLTPDDARLLAHQVQLYYATSPENYKTVLAFNKSPSTFDHRLLIDGVNAMIKAAAEAAK* # PASA_UPDATE: g14026.t1, single gene model update, valid-1, status:[pasa:asmbl_6515,status:12], valid-1 NODE_376_length_25502_cov_40.7694 . gene 7396 12551 . - . ID=g14026;Name=g14026.t1 NODE_376_length_25502_cov_40.7694 . mRNA 7396 12551 . - . ID=g14026.t1;Parent=g14026;Name=g14026.t1 NODE_376_length_25502_cov_40.7694 . five_prime_UTR 12432 12551 . - . ID=g14026.t1.utr5p1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 11299 12551 . - . ID=g14026.t1.exon1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 11299 12431 . - 0 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 11116 11175 . - . ID=g14026.t1.exon2;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 11116 11175 . - 1 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 10631 10694 . - . ID=g14026.t1.exon3;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 10631 10694 . - 1 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 10418 10445 . - . ID=g14026.t1.exon4;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 10418 10445 . - 0 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 10109 10122 . - . ID=g14026.t1.exon5;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 10109 10122 . - 2 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 9444 9688 . - . ID=g14026.t1.exon6;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 9444 9688 . - 0 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 8533 8968 . - . ID=g14026.t1.exon7;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 8533 8968 . - 1 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . exon 7396 7976 . - . ID=g14026.t1.exon8;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . CDS 7761 7976 . - 0 ID=cds.g14026.t1;Parent=g14026.t1 NODE_376_length_25502_cov_40.7694 . three_prime_UTR 7396 7760 . - . ID=g14026.t1.utr3p1;Parent=g14026.t1 #PROT g14026.t1 g14026 MTRHGGRVPASASRTAHIAALLVASLFVAAVVADTSRAARAIHGIRARHTELSGTNAAAMAVAYHAGSGGATAVSIPHDDRRLGARAAESMEEAIDRFVSSKYGEAFGITEANRGELKFVSANTDKLGFVHAVLRQEHKGLAVDGASLVIHMTSAFELRSATGLFLGHIELPSTEVEIGESVAVNNAMDKAASMAELHSGKPAALSTTLVVFRVGLANAKYGGADRLAYKVRVGAGMGKHAEGRAIANVFVDAVTGSILAVHSLVPHALTREAYKLPNGNPKTWTLMYREGGVRPTAKEYVTAIDTALQTYNLYASLTNGEFLSFDGKDSTMVSHVFNFPTKSCKTDADCSDPAAPDAGWVCDMTKKKCIQTGCPNAWFDGVKSNYCPGLVSDDVAAHEWSHGYTQYSSRFGDLTYVGESGAINEALSDIHGETVDLLNKVGVDGKGSNKPRANVCASRLDKVNGNLRWYIGEDLDMAGLFGSTTDYLRDMLNPECAGNAGSTSSDLYTCESWDMFGVHSNSGVFNRAYALLVDGGFANIASGAGIGFQKALHIIWRAQTEYLLQYSTYALLASSLNYSCLDYSETQTPLNKLVLTGASTWGPTTVTITQADCDVLSAVIAEVGMTGSPCPALGAVKSLKASKVTKTGATISWTKPDGFQYPQPTDASYIPSYYEVTVTGAGGPPSTSYLTNPGGSITGLKGKTKYTVSVTPYMFRGFVKGPAKKVSFTTL* # ORIGINAL: g14027.t1 original gene structure, not modified by PASA NODE_376_length_25502_cov_40.7694 AUGUSTUS gene 14212 16026 . + . ID=g14027;Name=g14027.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS mRNA 14212 16026 . + . ID=g14027.t1;Parent=g14027;Name=g14027.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 14212 15630 . + . ID=g14027.t1.exon1;Parent=g14027.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 14212 15630 . + 0 ID=cds.g14027.t1;Parent=g14027.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 15868 16026 . + . ID=g14027.t1.exon2;Parent=g14027.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 15868 16026 . + 0 ID=cds.g14027.t1;Parent=g14027.t1 #PROT g14027.t1 g14027 MAGAVNEQSNGSHTTAPMPNTTARGTSPEDTHTHNASDTHGTRVGKPVVGNATRRKFRHFVTRLFHTAYIFKNPIDVEVVYHWLYVQKPPPPIDTSAVTCVEGCADATGISGNAQERRASESTLHGRSQSTPTGAVPQPQQIPAVGDATTSSLDKGVPSDSAEESHGTCRTSCENLSRKSYRRAERASKDCLFEDGHEPGVCLPTPDACLRRTDAAPPSVPCGAGGAVGRRGEENACARDGGCAPELCLSEEHSDAASATAGSTNAPQPTPAPCSDEGNLRPKRRHHRRRCACIAPAQEDDSGDANVAGVGGGPRSDDATDSLPGPVPPPPHARSDRRRRAQLEREWLQMRWIPKRPSKIVLVDARREEEFCCSHIEGAINIRYDKRWVAWRAITRPFHGQRPGEVAADDAIEKLDRDATIIVYCGLGFRSAMLARRIMAHGFARVHVMRGALYKWASLGLPMRDGNGRPSNKVIADNYLATFALNWEVVVKDAPATPVDKTSASDEARQCRAEGGTYETGRSCE* # PASA_UPDATE: g14025.t1, single gene model update, valid-1, status:[pasa:asmbl_6517,status:12],[pasa:asmbl_6519,status:12], valid-1 NODE_376_length_25502_cov_40.7694 . gene 2163 6935 . + . ID=g14025;Name=g14025.t1 NODE_376_length_25502_cov_40.7694 . mRNA 2163 6935 . + . ID=g14025.t1;Parent=g14025;Name=g14025.t1 NODE_376_length_25502_cov_40.7694 . exon 2163 2348 . + . ID=g14025.t1.exon1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . CDS 2163 2348 . + 0 ID=cds.g14025.t1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . exon 2513 4369 . + . ID=g14025.t1.exon2;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . CDS 2513 4369 . + 0 ID=cds.g14025.t1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . exon 4583 5884 . + . ID=g14025.t1.exon3;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . CDS 4583 5884 . + 0 ID=cds.g14025.t1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . exon 6021 6101 . + . ID=g14025.t1.exon4;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . CDS 6021 6101 . + 0 ID=cds.g14025.t1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . exon 6269 6935 . + . ID=g14025.t1.exon5;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . CDS 6269 6583 . + 0 ID=cds.g14025.t1;Parent=g14025.t1 NODE_376_length_25502_cov_40.7694 . three_prime_UTR 6584 6935 . + . ID=g14025.t1.utr3p1;Parent=g14025.t1 #PROT g14025.t1 g14025 MARNAARDAGALPPPEDKKWAAVKRSDFTSVKILGSGSFGKAILVKQRDGGQYVIKEVDMAKMNSTDIRLAKEEATNLAKFKHPHIVGYYACFVDGAKLCILMEFCMHGDLYAEVKQRQKSNKPYSEAEIYSYFIQLTAAIKHIHDRHCLHRDLKTQNVFIGENHLLKLGDFGICKILANTADNAATVIGTPYYMSPEICANKRYNKSTDMWSLGVILYEIITFSHPFEGRDMKSLMDAIRVGYFRPISSSRSADLRELCTSLLQKDPKKRPTANQIFRSDSVRRRLMQIPSVAQKTDEFMHTVLHHNSRLNHPLFTVAPQGPANPAPVNAVAAVPSSAFGMAPSAAIAANAQQQMQLELAQQKLRNQIVLQQQAAAAAAYAGNPRNAYMNPKLNDFRDVHKEGREEYLRKNQAEAQRILDRFLPAPAAAPHAAAPVVGRGVADRHRPPSSEAARAQIVPDARAMRAPSAAAQPPADYARDREREREREKEREREREREREREREREREREREKERDRVDLRQPRQERRDVEDRRAYAAPAAPVAPPAADRYRAAPAPAPAPAPAPAPRDAARPVDRHAGHGPALGAILDGRPAVARDRNEVALGGGGGGMGMAPPAAARPKKPLAAGAAARPSAGVGVRPPEKKIPKPTPAAIAAEAAHRGPKEKALTPLELALRAKDDMMRKKADYVRAQKEGKNPEAPKPKEPEKDKPKAKEPEKEKLKAKEPEKEKPKAKEPEKERARAKAPTDADKPKPRVPSAPAAVKPAVNVGNFNIQIPDKNDRHAVVPDTHVVARARPSGAAQKAPASVAPDTHVIDRPALARAPSDNNLAADRLREREKEKERHAAARPLAGIEGVAVVAPKPIAADTRVVESRASATGDVHKQARRPKDETHNVDNAPANNKRPSYSPPIAAGVPAPAPAPAPAATTVIKTPSPVVAAASPTEAVTPVAAESGESDAHSDDNDVVYSGSESDGDEQEEHLEHHTGDEEDTSDPALAAAGDASSSDERVDDHNADSPVHVPDVEDAEEDEDPGFEEVVDLGAAPATTGDSAHAEAAVDDEPMPYPADAGAIETLVFCLADACDDHDDDPEFQHLDDEAEMDEEELAIEIRHAWKQADLGCETAILGEKARRDVLTDGSKLEMVRGRIEDTCGEGIGWQVMMTITGLMDALTSPDLPQKDADYAEEVAAIRRGDAVDWDGVLRERLEGCGMTPATLEGNMPLFMLYFQLEMRERRGEFDVHDHLLRQ* # ORIGINAL: g14030.t1 original gene structure, not modified by PASA NODE_376_length_25502_cov_40.7694 AUGUSTUS gene 24162 25474 . - . ID=g14030;Name=g14030.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS mRNA 24162 25474 . - . ID=g14030.t1;Parent=g14030;Name=g14030.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 24434 25474 . - . ID=g14030.t1.exon1;Parent=g14030.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 24434 25474 . - 0 ID=cds.g14030.t1;Parent=g14030.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS exon 24162 24281 . - . ID=g14030.t1.exon2;Parent=g14030.t1 NODE_376_length_25502_cov_40.7694 AUGUSTUS CDS 24162 24281 . - 0 ID=cds.g14030.t1;Parent=g14030.t1 #PROT g14030.t1 g14030 MFRTYTLCLVSPCRMNNPQLTDTLAANGKLHESVDRLRSQLADVETAREADRRQLQNALVVELKKHKEELEKRMSAAAAVDFEAVGKKVSREMETRADVAGRLAALQAELASMASLDALAAQCAALAEKHRQPLAEDKDGAPHAQPSEPFPYAVGEGGGVRPGKAHGHVLEHVPASFVETQTVLTPRLRNKTTVESPTVEALVGKKVFGVRTAKGADGYVLRNQTRDGNTIQTQIFKGKVKKSITGSGATVLFTGVETMTDVAPTHTAAHTDDGDEGGRRKKRKSVDDGDENVAPAKRARRSLDSSMSARNNSAGSNTNGLWGTVSDGDASEESAGGKDAAVDVQARCAFGIQSTESGTPSVMHRMVDRPTRRWVAMGIVLGISRI* # ORIGINAL: g4142.t1 original gene structure, not modified by PASA NODE_3211_length_4007_cov_36.0155 AUGUSTUS gene 700 1949 . - . ID=g4142;Name=g4142.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS mRNA 700 1949 . - . ID=g4142.t1;Parent=g4142;Name=g4142.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS exon 1284 1949 . - . ID=g4142.t1.exon1;Parent=g4142.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS CDS 1284 1949 . - 0 ID=cds.g4142.t1;Parent=g4142.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS exon 700 981 . - . ID=g4142.t1.exon2;Parent=g4142.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS CDS 700 981 . - 0 ID=cds.g4142.t1;Parent=g4142.t1 #PROT g4142.t1 g4142 MATTDGDTDMAGSAPAMQFKLSTSPTFAFPATAFPPISPFPLELILPSQSDIERISQPVEQLHDVGKVRASKQRGKRTDATDPTGSSIKLGKALIDAASAGKIVEVRAHIELGAPVNAADKRGRTALHFACCKGDLEMAQALLSAGADPQPRDTNGNTPLHLAACVNHIDVVTLLLASGTDPHAADVQGRTPLHYAESRLRILLAAPPKSDYGTNFANEVMKVALMLKEYMGRVGDDAAADNIAALSMRLGSSMTTQDADDVASLLQGLAGIRLTSSQGALSHSAPEFTAGRPSPRRVHNEKSAVRDALADVVKL* # ORIGINAL: g4143.t1 original gene structure, not modified by PASA NODE_3211_length_4007_cov_36.0155 AUGUSTUS gene 2596 2925 . + . ID=g4143;Name=g4143.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS mRNA 2596 2925 . + . ID=g4143.t1;Parent=g4143;Name=g4143.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS exon 2596 2925 . + . ID=g4143.t1.exon1;Parent=g4143.t1 NODE_3211_length_4007_cov_36.0155 AUGUSTUS CDS 2596 2925 . + 0 ID=cds.g4143.t1;Parent=g4143.t1 #PROT g4143.t1 g4143 MMHHTGDRVLIGGANFDSPANPPPPAANNFVMQPPQDYRSGAPTQDERILTVNNPVTRAHSLSGVPAATNPPPVTHAQYPFNHIQVATHPAPMPQGQGPYSYMYLVPRF* # ORIGINAL: g2980.t1 original gene structure, not modified by PASA NODE_4567_length_1455_cov_48.7217_potentialcontaminant AUGUSTUS gene 967 1170 . + . ID=g2980;Name=g2980.t1 NODE_4567_length_1455_cov_48.7217_potentialcontaminant AUGUSTUS mRNA 967 1170 . + . ID=g2980.t1;Parent=g2980;Name=g2980.t1 NODE_4567_length_1455_cov_48.7217_potentialcontaminant AUGUSTUS exon 967 1170 . + . ID=g2980.t1.exon1;Parent=g2980.t1 NODE_4567_length_1455_cov_48.7217_potentialcontaminant AUGUSTUS CDS 967 1170 . + 0 ID=cds.g2980.t1;Parent=g2980.t1 #PROT g2980.t1 g2980 MATGGQGVEAAANTEDGSRTKKEKRKRSSSHGRAASTEVRILLNKVPKLASDFTVVDKIGEGRHESL* # PASA_UPDATE: g11563.t1, single gene model update, valid-1, status:[pasa:asmbl_1608,status:12],[pasa:asmbl_1609,status:12], valid-1 NODE_1442_length_11264_cov_40.8337 . gene 8425 11113 . - . ID=g11563;Name=g11563.t1 NODE_1442_length_11264_cov_40.8337 . mRNA 8425 11113 . - . ID=g11563.t1;Parent=g11563;Name=g11563.t1 NODE_1442_length_11264_cov_40.8337 . five_prime_UTR 10994 11113 . - . ID=g11563.t1.utr5p1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 10803 11113 . - . ID=g11563.t1.exon1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 10803 10993 . - 0 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 10560 10696 . - . ID=g11563.t1.exon2;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 10560 10696 . - 1 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 10341 10414 . - . ID=g11563.t1.exon3;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 10341 10414 . - 2 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 10147 10159 . - . ID=g11563.t1.exon4;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 10147 10159 . - 0 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 9910 9959 . - . ID=g11563.t1.exon5;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 9910 9959 . - 2 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 9455 9490 . - . ID=g11563.t1.exon6;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 9455 9490 . - 0 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 8935 9144 . - . ID=g11563.t1.exon7;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 8935 9144 . - 0 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . exon 8425 8672 . - . ID=g11563.t1.exon8;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . CDS 8646 8672 . - 0 ID=cds.g11563.t1;Parent=g11563.t1 NODE_1442_length_11264_cov_40.8337 . three_prime_UTR 8425 8645 . - . ID=g11563.t1.utr3p1;Parent=g11563.t1 #PROT g11563.t1 g11563 MSKKRATRPTLREQKDSAAQSNEQAHAAAVAMFEEEYKKDKITLLTRHLTAAKLLQNTSASYFRKIEYQRKNKGRYPLSEVLGWKAVFDVYDVDKSGTITMEEFNDASQHAANLIEQLKFSDLDSDHDGVITFKELLQAVYQYASATQIDWMVDMAYPEGLPKIYDREKKRALTRAQKAEITSIFRAYDTDGSDTLSLDELTEALTNSGYDMNEMKKLFSDNDFDRNKQLSLEEFVVLIADAYLN* # PASA_UPDATE: g11562.t1, single gene model update, valid-1, status:[pasa:asmbl_1605,status:3], valid-1 NODE_1442_length_11264_cov_40.8337 . gene 462 8442 . + . ID=g11562;Name=g11562.t1 NODE_1442_length_11264_cov_40.8337 . mRNA 462 8442 . + . ID=g11562.t1;Parent=g11562;Name=g11562.t1 NODE_1442_length_11264_cov_40.8337 . five_prime_UTR 462 749 . + . ID=g11562.t1.utr5p1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . five_prime_UTR 957 1008 . + . ID=g11562.t1.utr5p2;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 462 749 . + . ID=g11562.t1.exon1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 957 1084 . + . ID=g11562.t1.exon2;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 1009 1084 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 1211 2607 . + . ID=g11562.t1.exon3;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 1211 2607 . + 2 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 2833 3636 . + . ID=g11562.t1.exon4;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 2833 3636 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 3958 4053 . + . ID=g11562.t1.exon5;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 3958 4053 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 4210 4323 . + . ID=g11562.t1.exon6;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 4210 4323 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 4729 4932 . + . ID=g11562.t1.exon7;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 4729 4932 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 5263 5514 . + . ID=g11562.t1.exon8;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 5263 5514 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 5761 6918 . + . ID=g11562.t1.exon9;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 5761 6918 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 7136 7228 . + . ID=g11562.t1.exon10;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 7136 7228 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 7668 7794 . + . ID=g11562.t1.exon11;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 7668 7794 . + 0 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . exon 7977 8442 . + . ID=g11562.t1.exon12;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . CDS 7977 8215 . + 2 ID=cds.g11562.t1;Parent=g11562.t1 NODE_1442_length_11264_cov_40.8337 . three_prime_UTR 8216 8442 . + . ID=g11562.t1.utr3p1;Parent=g11562.t1 #PROT g11562.t1 g11562 MSRKQTNVPEASALTKAVIQGDLEETIRILELDETQVDEGDSEGLNALFYALMHERVECALELLYCCGSTLSIRANTSHRCETISQCLRTLLAALQLYSQHNNLRTASKGVASSSNSFDGTNDAAPASPRFVRRASGAQSRSLAFHTLDLSCLALENEHVYYIASIMRLRHMSITALDLSHSQIGDEGAILLANALSRTENTVRRVNLSANAITDVGGKKLAKLISSRIIHLDVSFNQLSANVRAQIQAVVGRNFLEYTLQDAKHAIICSGKFVGNEGVRRIIEFLSGQNAKESVHEFGFSGIERKVFYLFQRLVLRDNAISLAKPLADFLLTSDGRGITVIDLAGNSLGDAGAASLSSILRENCPLAVLNLERNSIENAGAVALASALEGNTFLRVLSLRKNLLGNDAAKAFAATFNSAGFGHSKLSHLNLRYNLVTDSGAKGLLQSAPVQQGRIVVYMDSNPVGKAVLQTARRHSMTTLVNGRSDGAKGALGDSTENLVVVVGDALRDSLSVKLSETICGMKSKTSPACRFDCRFATAPVIEPNTPMFNSNVQSGKGFILNCNLRNQSDLHRLHNAREAILTSAGFVPMVVLASISDIEIRMQLETLALSWNCPVFIHADADGQYPETVAECAHAMCGRIDSWLLGDVDPDVAQLDALDETWQADIESEAQSLYREMFKSLQVIQNKAKSPCIMVVGPAGSGKSSLINRVFQSNVAVAGAGLSQTRSMEKYENSKVRMFDTVGIEKGEMKLNEFKQKLANECRAKFSLDTPDDTIHVVWYVLSGSRWEQFDKTYCDIISEVCNRPVPVLVLLNKSDQNPEEIDAMKKAVMSRPPEHLIGVFRTVSVNDSRPITIHMCPHPGCGSYGTSRTMPEYVFTCDAKGHKTSTAPLNELNMVLEKTQEIMPDSVRASFVSSQQVHLQMKRNMAPSIIWRRLKTLNSANLFFGKKVTRVFVKILAELAHLYGFTRVSERELVDLSQVFDFRLGPLLFLQKKKIFIHMLALVVLWNYFLAERAELIVKELINRSGGGHGEDTSGILSQLRYALDLANKRYFLNMPWVKDTLIPALEPMTGLSMTQMSEVLEIRRVFAVCDKLIRDNLEQHKPPPAHAPDGPKESGKKTREILRQWMTKIVDDRDEPAMNAFFFAYQTLCPTLDANVIVMRLLMERFPVGKFSMEDGRQNVQLRVIHVLIYWIKEFKDDFRDDDASSDGESDDGNSSSTGLGASLRGASDLKAGSDENEGITMRSLVDNFLESVQCAGFGDLCRVIEAMLSTKAEGQETAITPATRPLLLQFSPDSIANALTTKHFNIFRKIKMQTFVIGDKTNISEMNGEFNRVSNWVVSTIVSETNMDNRIKLMAHFVEVLKALDTLKNFHGMMAVLSAFNRTPIARLEVTWKGLQESRPSVYTDLKDLVNPNSTRSSNIQKRLLETNPPCVPFLVGTLRMIEQEKARQQLADQRGPGKFAEIVETIRRFQKHPPRTFEVHEDLRDHLELLKSLESEEEMMRFSLQIEPRPPKK* # PASA_UPDATE: g12417.t1, single gene model update, valid-1, status:[pasa:asmbl_3079,status:12], valid-1 NODE_1946_length_8398_cov_40.8891 . gene 234 2390 . + . ID=g12417;Name=g12417.t1 NODE_1946_length_8398_cov_40.8891 . mRNA 234 2390 . + . ID=g12417.t1;Parent=g12417;Name=g12417.t1 NODE_1946_length_8398_cov_40.8891 . five_prime_UTR 234 234 . + . ID=g12417.t1.utr5p1;Parent=g12417.t1 NODE_1946_length_8398_cov_40.8891 . exon 234 1109 . + . ID=g12417.t1.exon1;Parent=g12417.t1 NODE_1946_length_8398_cov_40.8891 . CDS 235 1109 . + 0 ID=cds.g12417.t1;Parent=g12417.t1;5_prime_partial=true NODE_1946_length_8398_cov_40.8891 . exon 1376 2390 . + . ID=g12417.t1.exon2;Parent=g12417.t1 NODE_1946_length_8398_cov_40.8891 . CDS 1376 2228 . + 1 ID=cds.g12417.t1;Parent=g12417.t1 NODE_1946_length_8398_cov_40.8891 . three_prime_UTR 2229 2390 . + . ID=g12417.t1.utr3p1;Parent=g12417.t1 #PROT g12417.t1 g12417 DLLARVAVNARMSRLRNLHASRDALLLALTTRIASNASLGDIVKCAINGLSKIAGAARVEMDVATNTPRAHKSVEVGPPESSHSAGIRHAGPPSLTVPIDDGRGNGTWGELRLWSGLSDATDSVMGGVMTGVTADVTARGSDGLDRWSASLARQVALAMGIAAMRDRLADEIEEQVHGLRAANAAKSQFLASLSHELRTPLTPVLLLADEMRSEVQIPQELRDKFDIIYRSTLLETSLIDDLLDLSRLEANKIVLNQTPHHVHDVIRDVISIVKPDLDSVSMAVELHLDAPRCRCLADPVRLRQVFWNIVRNAAKFTTGAGDKLTVTTRIEPGHDGNPDCIVTSFSDNGIGIDSKKLVDIFEPFKQGADNIPQRFGGLGLGLAISRSFVLLHGGHVSAESAGVGHGATFTVSLPLLPEDSQGPNGLHDAAATTPDVRLQCVVEGDKSVSVLVVEDNAMSAKVLARILQHRCGFDVMIAGCCREAIAAFKSGARFDVVVSDIGLPDGTGTALFEELRLIDNSVRGIALSGYCTRDDVEKSIRAGFSSHLSKPVKWELLREEVWKCLESDPACARLA* # ORIGINAL: g12418.t1 original gene structure, not modified by PASA NODE_1946_length_8398_cov_40.8891 AUGUSTUS gene 2751 8124 . - . ID=g12418;Name=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS mRNA 2751 8124 . - . ID=g12418.t1;Parent=g12418;Name=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS exon 4384 8124 . - . ID=g12418.t1.exon1;Parent=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS CDS 4384 8124 . - 0 ID=cds.g12418.t1;Parent=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS exon 3984 4223 . - . ID=g12418.t1.exon2;Parent=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS CDS 3984 4223 . - 0 ID=cds.g12418.t1;Parent=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS exon 2751 3680 . - . ID=g12418.t1.exon3;Parent=g12418.t1 NODE_1946_length_8398_cov_40.8891 AUGUSTUS CDS 2751 3680 . - 0 ID=cds.g12418.t1;Parent=g12418.t1 #PROT g12418.t1 g12418 MRYFASVGGTSEAESQIEKKVLASNPIMEAFGNAKTIRNDNSSRFGKYIQIQFDKNQSIVGATMRTYLLEKTRVVFQAADERNYHIFYQLCAAAFTNEAYKSELADLELVSQTQHHYTSQGENAFIEGVDDAADFELTRQAMLFVGLDHNTQRQMFQVLAAILHLGDVPVTATRRDEAQIDTSDPHLKSAARLLGVDAAQLAKWFTCRRIVTGKDSVISPLLKPQALGARDALAKQTYARLFSYIVEKVNASLSHVEKQKTFIGVLDIYGFETFESNSFEQFCINYANEKLQQQFNMYVFKLEQQEYVKEQIEWSFIDFYDNQPCLDLIEDKLGILSLLDEECMMPKGDDASFVQKLLKNVGDRKHFSTPRMGGKAAFIIHHYADKVCYDSAGFLEKNRDQLQDDQVALMAASQNPVIAMLFSEDGGLKAASGASASSVKKPAIPASASASQGAQQKKKTTLGTQFKESLSALSATLNATRPHYVRCIKPNQQKIASLFVPSFVIQQLRACGVLETVRISAAGYPSRWSYDDFFDRYAMLVKGKKPSRADLRGACQVIATATMPDKDKYQFGRTKIFFRAGIVAFIEKLRMDRMRWAAVTVQKNVRRWMYGRAYRRLRRAVLLVQRNARGWSARRLCDSMRRARAAVRIQKRIRGWLALRAYGRVRRTVVWLQCRARGIAARKVYLEMRRQHAATTIQRLYRGHVCRKEGRLRLRAIVLAQSCWRRLKARRELKSLRVEARSVEHIKKEKWGLENKVIQMQNRIDDQVKHAAMQQKTIDALTAEMEAAKAKFAAANPMRDRIAELETECMTLREALGVSKDAEKEACARADTAEASFSAAAARMVELEQALTTAKESETSLRALLAAASAATTSLAYHGHSPSHHGHAAAARQISTESTSSDHGATPRTKLTLERRPSQPSETSAARRLSFGGEQHARQAAAAAAPVVAPAVASAPVVAAHTTATSAHVAEAPAVATLAQPSAPAVQQGASTPDVTHVSASTLPSLSAESTVPTAVPTVSARDPTPSSVASTQPQPQSGAVAPRAHPDAASVAVTCAVDSAAAAALAAVAAALSDDAVSHGVVVAAETHAPHYVPNAQFSASNYAPAAHVVDEALYAVAVAANVDSENRIAQLLSELAIVNADLRASREQNGRLQEKVINLQMAVEKLSKEKPRMDNNAALFGASLQDEVTRLTMENVGLREELEALQAQMKGLRHLEDAQDERRRRGSIARRDSVTKGGAHRQDIEDVAEEEDGVIGAFAFAERDEERLVTELILQANVDLLRLELPGITGHVLFMCIRYADHVNNPKMLQTLITRTISSIKHIVMKHETSLEVLAFWLCNTVHLLSDLRQFGGEETGDMHIIAPAHKCLKNFDVSEARIALSTLSIKIYRSIVRVVQDLIAPMVVSAMLENESVQGISASVGVFGRIMKRAPQVVHTPESLCDALTNVVAILEQSFVHPAMIHQMMEQWMYFIGATMMNNLLLRKELCNWSKGVQIVYNITVLETWFRERFSNKLCEGLAEVRQAAQVLQCGTGAVDLDMLNDITSRLNPLQVQKLLAMFTPDAGQERIPATIVRAVGSWRRDNIDGGNGDWKLMMEADRQGAPVTIPYEPASVSFETLTLPKCIPLENSIKII* # ORIGINAL: g2987.t1 original gene structure, not modified by PASA NODE_5667_length_760_cov_52.1752_potentialcontaminant AUGUSTUS gene 2 760 . + . ID=g2987;Name=g2987.t1 NODE_5667_length_760_cov_52.1752_potentialcontaminant AUGUSTUS mRNA 2 760 . + . ID=g2987.t1;Parent=g2987;Name=g2987.t1 NODE_5667_length_760_cov_52.1752_potentialcontaminant AUGUSTUS exon 2 760 . + . ID=g2987.t1.exon1;Parent=g2987.t1 NODE_5667_length_760_cov_52.1752_potentialcontaminant AUGUSTUS CDS 2 760 . + 2 ID=cds.g2987.t1;Parent=g2987.t1 #PROT g2987.t1 g2987 PTNSDAPAEQSATTERMGDTLYAEARDLPCPVRAQSKTVPASTLAIASRGARPTAAPAVATSSRGTGSAGGGAPAKSSPAAQSVSAQLTKQRLPLKARLSAQTAQTAALVSGNPRVALAVYFACNSAIDACGGHQLRGKVACDRLRRIANASACVIANDPDVIVTHRGVAAALACLQSGEGTAFDVRWSDVSALLKDLADKLTAQNACSNLRVAGAIMGKLAGMPSARQEAEYAEALRHYTLCQAAVRRHYH # ORIGINAL: g232.t1 original gene structure, not modified by PASA NODE_2570_length_5846_cov_43.9224 AUGUSTUS gene 2885 5412 . + . ID=g232;Name=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS mRNA 2885 5412 . + . ID=g232.t1;Parent=g232;Name=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 2885 2956 . + . ID=g232.t1.exon1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 2885 2956 . + 0 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 3133 3291 . + . ID=g232.t1.exon2;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 3133 3291 . + 0 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 3477 3651 . + . ID=g232.t1.exon3;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 3477 3651 . + 0 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 3900 3976 . + . ID=g232.t1.exon4;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 3900 3976 . + 2 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 4283 4498 . + . ID=g232.t1.exon5;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 4283 4498 . + 0 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 4678 4850 . + . ID=g232.t1.exon6;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 4678 4850 . + 0 ID=cds.g232.t1;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 5118 5412 . + . ID=g232.t1.exon7;Parent=g232.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 5118 5412 . + 1 ID=cds.g232.t1;Parent=g232.t1 #PROT g232.t1 g232 MSGYRKGKKGKGKSPGGPKRRQSGGRRKTEGLQALVGDRLSVSEPEDGQPYNDEWMTVCIPVFNFNCCILTSAASVFEDEEEPDQFSGVMESIVKIYCRHTEPNFSLPWTMRRQGASVSSGFVIDNRRILTNAHSVEYFSQVKVKRRGSDTKFIAEVLAVGVECDIALLTVTDPEFWEGIVPLRFGPLPRLQEVCSVIGYPIGGENISVTSGVVSRIEVTSYEHGSAELLAVQIDAAINAGNSGGPAFNRRGRCIGIAFQSLVGEDVENIGYVIPYPVVARFLADYDRNGRYTGFPTIGFDWQRMESPALRASLRMTPRQKGVLVKAVHPLHAAASILRRGDVVMGFDGIPIANDGTIPFRNGESILFSYLVSEKVGSSLVMLVLCCE* # ORIGINAL: g231.t1 original gene structure, not modified by PASA NODE_2570_length_5846_cov_43.9224 AUGUSTUS gene 109 2309 . - . ID=g231;Name=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS mRNA 109 2309 . - . ID=g231.t1;Parent=g231;Name=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 2141 2309 . - . ID=g231.t1.exon1;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 2141 2309 . - 0 ID=cds.g231.t1;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 1572 1889 . - . ID=g231.t1.exon2;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 1572 1889 . - 2 ID=cds.g231.t1;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 1226 1406 . - . ID=g231.t1.exon3;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 1226 1406 . - 2 ID=cds.g231.t1;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 700 821 . - . ID=g231.t1.exon4;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 700 821 . - 1 ID=cds.g231.t1;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS exon 109 327 . - . ID=g231.t1.exon5;Parent=g231.t1 NODE_2570_length_5846_cov_43.9224 AUGUSTUS CDS 109 327 . - 2 ID=cds.g231.t1;Parent=g231.t1 #PROT g231.t1 g231 MPVVVASGFNAFGQICPSRETHLWGATELVIPELVLPDGDDICGACGSWNSTYVWTVSGIALRIGTALTTTTAQKQTHESDYEAHTRVGTMPLVTRIESGLVGIASVSAGWRHAFAVLRDGSVCYIDDKGAGVTLLQVEALAARRERIASIAVGVNFLLARNENGTVYHLSPGDLPSNSGAIPPPHQWTAQCIAKNVSQVACGYEHALLLSSNGTVWSYGANRHGQLGHGDIDGRSRPEVVEALDGVRGRIVRCGGWHSAVVSGDGDVYLFGWNKNGQLGLASDPSQLASSEPSVVPLPTPLEVDVLCNDGDEEADHVIVADVECGSHHTVLQTGE # ORIGINAL: g2236.t1 original gene structure, not modified by PASA NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS gene 1894 2964 . - . ID=g2236;Name=g2236.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS mRNA 1894 2964 . - . ID=g2236.t1;Parent=g2236;Name=g2236.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS exon 1894 2964 . - . ID=g2236.t1.exon1;Parent=g2236.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS CDS 1894 2964 . - 0 ID=cds.g2236.t1;Parent=g2236.t1 #PROT g2236.t1 g2236 MSNNKALIERLNWCGGLGDALWNHLNGLKSQAGADACVIFSKLFQEDLTCTHLVDWAKLIETELGHRPRYMENLYGLVNAVGAPLVTNGHLTEDIYRRAESNDRSRIAQLRIYQNNKLPGDYIGTTNGRVFPQPLWESKGKRARPGLSLARTPRGAILLTDDKILEEYDGTHADFNMDQETLNKKYRTSGRVFRVYALDKGSGIGSALLVENDYDDHITISVKDAAGLACVKLDDMVVSVSELTQLAWRPAKMFRCKAAADVRWPGWLRDDEDGQVVIAALELLIDGGDFDGYAAGLDMASAIEQVDSLTAISEEMVNAVRDSIVEHRFSCDDDSFDSALSALDRLANIEKVGERS* # ORIGINAL: g2237.t1 original gene structure, not modified by PASA NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS gene 6734 7713 . - . ID=g2237;Name=g2237.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS mRNA 6734 7713 . - . ID=g2237.t1;Parent=g2237;Name=g2237.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS exon 7695 7713 . - . ID=g2237.t1.exon1;Parent=g2237.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS CDS 7695 7713 . - 0 ID=cds.g2237.t1;Parent=g2237.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS exon 6734 7317 . - . ID=g2237.t1.exon2;Parent=g2237.t1 NODE_2042_length_7960_cov_50.8749_potentialcontaminant AUGUSTUS CDS 6734 7317 . - 2 ID=cds.g2237.t1;Parent=g2237.t1 #PROT g2237.t1 g2237 MWAKEIGEVTVDTDGTWEPLYRHPADEAPVLFAWTQLCDKIRQEVGKVVGREFNHALIQQYRDGTDHITEHSDKTLDILLDSPIVNYSLGATREMTFRPKKRGDQAQRILPPSNSAFVMGWKTNRAFLHSINRDIRPPRERFESDGLGVRVSLTLRTIATFRRRSDGRIRGQGAPQPPSLCMIASMDEQAVALTKAFGKR* # PASA_UPDATE: g12555.t1, single gene model update, valid-1, status:[pasa:asmbl_1246,status:3], valid-1 NODE_1338_length_11974_cov_38.9357 . gene 1933 9155 . + . ID=g12555;Name=g12555.t1 NODE_1338_length_11974_cov_38.9357 . mRNA 1933 9155 . + . ID=g12555.t1;Parent=g12555;Name=g12555.t1 NODE_1338_length_11974_cov_38.9357 . five_prime_UTR 1933 2010 . + . ID=g12555.t1.utr5p1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 1933 2076 . + . ID=g12555.t1.exon1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 2011 2076 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 2245 2429 . + . ID=g12555.t1.exon2;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 2245 2429 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 2664 3156 . + . ID=g12555.t1.exon3;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 2664 3156 . + 1 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 3470 3580 . + . ID=g12555.t1.exon4;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 3470 3580 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 3795 4319 . + . ID=g12555.t1.exon5;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 3795 4319 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 4682 4852 . + . ID=g12555.t1.exon6;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 4682 4852 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 5094 6617 . + . ID=g12555.t1.exon7;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 5094 6617 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 6903 6974 . + . ID=g12555.t1.exon8;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 6903 6974 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 7276 7644 . + . ID=g12555.t1.exon9;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 7276 7644 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 7968 8180 . + . ID=g12555.t1.exon10;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 7968 8180 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 8416 8709 . + . ID=g12555.t1.exon11;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 8416 8709 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . exon 8921 9155 . + . ID=g12555.t1.exon12;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . CDS 8921 9118 . + 0 ID=cds.g12555.t1;Parent=g12555.t1 NODE_1338_length_11974_cov_38.9357 . three_prime_UTR 9119 9155 . + . ID=g12555.t1.utr3p1;Parent=g12555.t1 #PROT g12555.t1 g12555 MADASLPPIRLGALVEVRGGKKGIVRYSGTTLFAAGKWIGVELFDADGKNNGTVAGKKYFSCLENYGVFVRQSQLNVLEDDEDGNARRLAESLSRMPSDVSSSAEPDAEGDGPSAPSSAPASAAAAPEPKPSPKAVKAPSVTVGSPLTTAKPPMKPASSLQASGGTMSTASVVSSVATSAAAVTHAASAVTPPRDRRPADVTRDEADNSSGDKVSASAALATSVIAGPSPARGASAADAAEMEALKEKIVTLEARRAEDREKLKEVDRLRMEVQRLEEYKQSWTQSQHDLQQRLLAATRTAKEMTEVAEAAKVEAQENADAAELATLDKEVAEEKAESMQLEIDNLKEKMEELQLDIEILKGERDEAGGVSVSVAPGEEAAGGVRLTSAEQRSLLANNERLKDALVKLRDATAAEKADLTRRVKELEMEAARGRDAIAAREKMVEEIRVLESDMADLTEQVDALSAAESMVATLSERSLDLEDRCRLLQDTVDDLEALKAVQEELEESHLETEREMQTALDDRDSTARALKTALDAALESSADYERTVLQYRDLVRALQSDLDSVRRANETKRSEVEELESRSQAVLNLNSQLQRTALKAHARAIEQDLRRLELSQAVAHARMLAEYVPEQFARNGDSDGLAMLLLLGRLSAKADIVSEHTRKQLVVTCADPSQRMPSSSPSPSSSEAAEASASFGLSVISSLARFKALVVRVEECLGRCDALLYSRVGAMHPSLRQFEKGLDALIDLLKREDLSVTCPVDFILKGIEVVGGIVRNELPTDGPAGPDACTSCEAAMHTASAANEWAAFDLARARSRALRVSSLSAAGQEKSTVETESLALLDAAIAEASATAELCRRSARKAAEVRNHLPRGMHVTQDASVAAAVASMSELSARTSSRASGIVSEASRFVPSAETDAPLSSDLDVRAFWDALFSAIVGKSLSESSAAASVSRDKAVAGDLIEATLALVAVRQSEGGAVDATGSDEPWRVRARALRAEIAELVLLRRKIEDKHKEVAAASAVVRAKESAIGDLEAKVAALEKRIDATRHDSERVVALETSLVDARAKEADLQVALDALTEDLAIAERDLLAMRKKVKSLESGKRGGGERVRDDVSRVESSAAAAAVALIGENASGTASPRSPSTTVASSPALSKRATRIDLATPDGGDEEVGPIKSLRNAVRHLRAENSRLRGDLARAVTDSLDSLPPLSASVAVLGESAGDHTFSLSTQRTRAAIRKASDYVRSCQLAAASVRVVDISRLHVGSTTGGEQPPASVAPLASEKVAVFPSAAAQLALLNSRERSLVSQRVDVEVTAAAAARDEFPLSTGVRRLVSPLDSVNAKALAKEWKDPQLIARLRVARAMSGTQNNSNGTSGSDGSTMSDSRINAFVVTAAQLDRIHSQLVFSS* # PASA_UPDATE: g12554.t1, single gene model update, valid-1, status:[pasa:asmbl_1247,status:3], valid-1 NODE_1338_length_11974_cov_38.9357 . gene 1 1622 . - . ID=g12554;Name=g12554.t1 NODE_1338_length_11974_cov_38.9357 . mRNA 1 1622 . - . ID=g12554.t1;Parent=g12554;Name=g12554.t1 NODE_1338_length_11974_cov_38.9357 . five_prime_UTR 1559 1622 . - . ID=g12554.t1.utr5p1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . exon 1502 1622 . - . ID=g12554.t1.exon1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . CDS 1502 1558 . - 0 ID=cds.g12554.t1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . exon 1050 1103 . - . ID=g12554.t1.exon2;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . CDS 1050 1103 . - 0 ID=cds.g12554.t1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . exon 639 726 . - . ID=g12554.t1.exon3;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . CDS 639 726 . - 0 ID=cds.g12554.t1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . exon 1 418 . - . ID=g12554.t1.exon4;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . CDS 291 418 . - 2 ID=cds.g12554.t1;Parent=g12554.t1 NODE_1338_length_11974_cov_38.9357 . three_prime_UTR 1 290 . - . ID=g12554.t1.utr3p1;Parent=g12554.t1 #PROT g12554.t1 g12554 MLLFCPTCANVLIVEQGSASFRFKCQTCPYMYDITQAISHKKYTKLKEVDDVLGGTEAWENVDTTEVTCPKCSNDSAYFMQIQTRSADEPMTVFYKCTNHDCNHQWRD* # ORIGINAL: g12556.t1 original gene structure, not modified by PASA NODE_1338_length_11974_cov_38.9357 AUGUSTUS gene 9396 11078 . - . ID=g12556;Name=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS mRNA 9396 11078 . - . ID=g12556.t1;Parent=g12556;Name=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS exon 11057 11078 . - . ID=g12556.t1.exon1;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS CDS 11057 11078 . - 0 ID=cds.g12556.t1;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS exon 10711 10841 . - . ID=g12556.t1.exon2;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS CDS 10711 10841 . - 2 ID=cds.g12556.t1;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS exon 10172 10318 . - . ID=g12556.t1.exon3;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS CDS 10172 10318 . - 0 ID=cds.g12556.t1;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS exon 9888 10005 . - . ID=g12556.t1.exon4;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS CDS 9888 10005 . - 0 ID=cds.g12556.t1;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS exon 9396 9595 . - . ID=g12556.t1.exon5;Parent=g12556.t1 NODE_1338_length_11974_cov_38.9357 AUGUSTUS CDS 9396 9595 . - 2 ID=cds.g12556.t1;Parent=g12556.t1 #PROT g12556.t1 g12556 MSELNADGVADGCGEFVNENADNFDLVRAILCAALYPNVAKIELPAHSANRGNAVKFEDISLKDRRGDTLSIHPASCNFKKTELTKWPYLVYHEKASPNLVRTTKVYLRDSSAVGHYALLFFGGKISLQDKDQVIALDDGWIRMRSTPQIASLISKLRMELDGVLAAKVEKPDKPAPNENEMLNAIVQLLDERRSSTATYGKGRR* # PASA_UPDATE: g5934.t1, single gene model update, valid-1, status:[pasa:asmbl_6077,status:12], valid-1 NODE_344_length_26405_cov_40.9173 . gene 414 7145 . - . ID=g5934;Name=g5934.t1 NODE_344_length_26405_cov_40.9173 . mRNA 414 7145 . - . ID=g5934.t1;Parent=g5934;Name=g5934.t1 NODE_344_length_26405_cov_40.9173 . five_prime_UTR 7086 7145 . - . ID=g5934.t1.utr5p1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 7070 7145 . - . ID=g5934.t1.exon1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 7070 7085 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 6670 6851 . - . ID=g5934.t1.exon2;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 6670 6851 . - 2 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 6314 6428 . - . ID=g5934.t1.exon3;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 6314 6428 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 5896 6044 . - . ID=g5934.t1.exon4;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 5896 6044 . - 2 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 5269 5640 . - . ID=g5934.t1.exon5;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 5269 5640 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 4663 5067 . - . ID=g5934.t1.exon6;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 4663 5067 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 4334 4492 . - . ID=g5934.t1.exon7;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 4334 4492 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 3968 4080 . - . ID=g5934.t1.exon8;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 3968 4080 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 3462 3573 . - . ID=g5934.t1.exon9;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 3462 3573 . - 1 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 3004 3086 . - . ID=g5934.t1.exon10;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 3004 3086 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 2646 2760 . - . ID=g5934.t1.exon11;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 2646 2760 . - 1 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 2107 2213 . - . ID=g5934.t1.exon12;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 2107 2213 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 1590 1689 . - . ID=g5934.t1.exon13;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 1590 1689 . - 1 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 1310 1430 . - . ID=g5934.t1.exon14;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 1310 1430 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 962 1053 . - . ID=g5934.t1.exon15;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 962 1053 . - 2 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 761 838 . - . ID=g5934.t1.exon16;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 761 838 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . exon 414 506 . - . ID=g5934.t1.exon17;Parent=g5934.t1 NODE_344_length_26405_cov_40.9173 . CDS 414 506 . - 0 ID=cds.g5934.t1;Parent=g5934.t1 #PROT g5934.t1 g5934 MSLDEIPDSYNFPKQEEKILKLWEEIDAFRTSLKLSEGRKRYSFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQTGHYVERRFGWDCHGLPVEYEIDKTLGITGPADVEKMGIAAYNAKCREIVMRYSKDWEFVVTRLGRWIDFENDYKTLYPWFMESVWWVFAELHKKGLVYRGSKVMPYSTGCLTPLSNFEANQNYKDVQDPTVIVGFPLDEEPDVSLVAWTTTPWTLPSNLALCVHPKKVYVKILDIPTGKKLIMMEARLSELYNKKGDTDKYKVLDSFNGEVLAGKGYTPLFPYFAARKTQGNFVVLCDEFVTEESGTGIVHCAPAFGEDDYRVCLKSGVISKGDVPCPVDVSGAFTADVTDFAGKYVKDADKEIIKHLKTSGRLVHQATITHSYPFCWRSETPLIYKAVPSWFIRVEDLKARLLANNTKSYWVPDFVREKRFHNWLADARDWAVSRNRYWGTPMPLWVSDDYEEVVCVSSIEELKQLSGIQDITDIHREFIDNITIPSKMGKGVLRRTPEVFDCWFESGSMPYAQSHYPFEKKEAFEQSFPADFIAEGLDQTRGWFYTLLVISTALFDQPPFKNLIVNGLVLAADGQKMSKRKKNYPDPLEVINKYGSDALRVYLINSPVVRAESLRFKEEGVRDVIKDVLLPWYNAFRFFLQNTDRLTKVDAINFKYDPTTVAVSENRMDRWILAFTHTLIKFVRTEMAAYRLYTVVPRLLKYIDNLTNWYVRANRKRLRGDSGLDECTKSLSTLFEVLFTMSKLMAPFTPFLAEFMFHHLRKFLAKPELEGVDVR* # ORIGINAL: g5936.t1 original gene structure, not modified by PASA NODE_344_length_26405_cov_40.9173 AUGUSTUS gene 21900 26206 . - . ID=g5936;Name=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS mRNA 21900 26206 . - . ID=g5936.t1;Parent=g5936;Name=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 26136 26206 . - . ID=g5936.t1.exon1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 26136 26206 . - 0 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 25773 25870 . - . ID=g5936.t1.exon2;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 25773 25870 . - 1 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 25337 25460 . - . ID=g5936.t1.exon3;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 25337 25460 . - 2 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 24965 25126 . - . ID=g5936.t1.exon4;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 24965 25126 . - 1 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 24702 24848 . - . ID=g5936.t1.exon5;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 24702 24848 . - 1 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 24302 24506 . - . ID=g5936.t1.exon6;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 24302 24506 . - 1 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 23683 23871 . - . ID=g5936.t1.exon7;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 23683 23871 . - 0 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 23401 23535 . - . ID=g5936.t1.exon8;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 23401 23535 . - 0 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 22534 22662 . - . ID=g5936.t1.exon9;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 22534 22662 . - 0 ID=cds.g5936.t1;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 21900 22292 . - . ID=g5936.t1.exon10;Parent=g5936.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 21900 22292 . - 0 ID=cds.g5936.t1;Parent=g5936.t1 #PROT g5936.t1 g5936 MAEAFTLSGRRSVVYGTRGCVASSQPLATQIGLDILKRGGNAADAAVATAAALNVTEPASTGIGGDVFCLYYDASTRKVRCLNGSGRSPAALSLELLRSRGHDGAELPSRDINCATVPGAAAAWADVVKTFGSGSLSLSQVLEPACQLAEDGFPVAPISAHLWQHNAGLLLEKGNGSSEMLIEGTTAPAAGDIIHLPNLAKTFRVLGSEGKKGFYGPNSAIAQAIVDAVVSRGGVMALGDLEAHKSTIEEPISIEFGDVRVWEAPPNGQGIVALMALGMLRDKLDELRSLGHNSADYLHHVIEALRHAFADGRRYICDPANGHVPVDAMLSQDYLRKRAGAIDASCAVPVTFGSPTVASDTVYLCVVDAAGNACSFIMEGHPNCIRGSARPYHTIIPGMVTRVDDGALVCPFGVMGGFMQPQGHTQVLLNMLVFGMDPQAALDAPRFCIEPLSHARLFPRGLDVSKDDCPPAAVDGVDGSIFSLVALEHGIPGGVSEELARMGHTVRGVEGWKRSLFGRGQIIRRSVTNGGRIVLAAGSDPRGDGCAAAY* # ORIGINAL: g5935.t1 original gene structure, not modified by PASA NODE_344_length_26405_cov_40.9173 AUGUSTUS gene 8094 20752 . + . ID=g5935;Name=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS mRNA 8094 20752 . + . ID=g5935.t1;Parent=g5935;Name=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 8094 8284 . + . ID=g5935.t1.exon1;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 8094 8284 . + 0 ID=cds.g5935.t1;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 8454 9921 . + . ID=g5935.t1.exon2;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 8454 9921 . + 1 ID=cds.g5935.t1;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 10310 11433 . + . ID=g5935.t1.exon3;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 10310 11433 . + 0 ID=cds.g5935.t1;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 11787 12468 . + . ID=g5935.t1.exon4;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 11787 12468 . + 1 ID=cds.g5935.t1;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS exon 12641 20752 . + . ID=g5935.t1.exon5;Parent=g5935.t1 NODE_344_length_26405_cov_40.9173 AUGUSTUS CDS 12641 20752 . + 0 ID=cds.g5935.t1;Parent=g5935.t1 #PROT g5935.t1 g5935 MDKFHKVLSAHWEDASHASIRSPVRVSASDTSSSASTPHHQSAAAASPRGRLLYASPPRGNGAGRPAARKLPFDSGVTSAYVNGGAVVDELFSDIGASASGEARGPAHSRHAMRTSVDDNLESMGALKRALLEATSEVEKLRERARRWEFERTRLADAADELQSTVDKRTSAMKDFAAQCEGLKGRCTTLEASLRREKARVGDVVRRAGLRDLAAYAGVEDDLTVLDLALQNSMDASGVFESTIEELTRKNRDHADAERRLQREVDAARAAADVSRREAEAAARELEAGRRSFDAEISRLRDTLDKSERSRSDERSRWQSERTRMSADLEAARAEALTVQRVAEAERVRADGVKQQLDDVSKKLAEVSLPRTVAVDVGTETHVPAGLDQAAVDAVLEECNFRVERAQEEVAEARAAAERERAVYERALASVVAAAEGRARRDAEAAKDAEFAAAERFRERGVPSPRGVHSPRGAHSGTPNGSPLRVGGGGGGVAHASPTLEALLGRDSGGSAGRVALEARVEELKSVVDALSRERDGMHVTVNDLEEQLRELQVTNAKKVTDNNRLKAQVREAEQAAARGVEHVRSLSAELERARSIAADANAECVRLRAETAAAHVTARAQVTPTSPSPPDAASSAAIALDLEAARESLAAETARRNRADALAQRVQRELDAESAERARLAAEVASLAARHDDVSEKLADAQLRLNAALADLDRAVSSGASADQTAAEQLEAVHARVEEASREHAMEQESLLRRIRDLESELAIAGDAARDEWRALHAQLSAAGGRIALLEAEAETGRLAQEERDALLVRLEDAVRAASVASAQMNLLRVELDETACKLTDVDGVLSATRAEAEGLAARLRASEASESALTLRLEEANARAAASHSAWQDTLERLNVVKTQCADALARMAGAERERDAVRADLEEARLHTEAEADRMAAHMRELEADCRTMVAAAYERERDGVAQVTSSYESALIQLRSESDAEIDRLAVQLAACDERCGHVTSSLADRTRELSDALRSLRDAEARNRQISEEHTRIVDAVAELEEAQRTIDSLQRAVDAAPDAVAVEGEVRAARESAVAAVRVEMDDLRGEVDELRASLRASEEACTLYKMDAEHKGIDCEEKAAQLAELDDEVERLSRELGDATSTIRDLQSVFCPKSTHMDTTRLAILFQAADESRARATEASSRLAEVEDLCHRRGRKIKDLKARVSALEETGGDAQRELMHARTQCDISRLRSDEWEFKCRSAIALAAERNEMLDAVSAELHDAREREEDLSQRAALALRLEDEVVGLRARIASDAATVAALKRDLASVALELSAAQSASAECDVLRSRAETLETENAELIARLTFAMRRLGEPLPFAAAVGSGGARGVASGARDGSREDGTGTPEEEIPEEIDGPSTPGTAPRMTRGPARRRGSELFPFPSSPFALQTIPRRLTDSDASPEVCDPAADGVEMDPAGVAAGVGVGVGVGMDAVSAVSSASASAFAVGDGDGDGENALTAQNEQNGRALIALRAEMEALEQRLATTAQLLAHEQALRHSLEVQSEEASAKMALLSKALTDADTERKRDAGSREFDIQMLQAQLTHVMEAAAAKEADNRVELDYLVEASRVCKEELEREVTALQYERDCVTESAAVVRTELEGLRAREAALAADYEAIVGVHNRLVAEHEAIAAKYAALLEERDVVVADRDALVAAAESQRARTVAAEKDWNAEREAMNRRVDDLADELKKCNADALSLTASKDVALAQLHDEIARLKRDLESLAAVSTVVTSTETSLPSAGVSADVSADGTIQPTGASVSLASVEETAAVPVSLIPVSKAARKKKKKKASKATAGDAVSADLPTAPPPHAEDGAADGDILDSPADSQDGIGNALRSALRDALVRESRVRRILMWLRTHTALAVDADLDVALVNTSDTRVTAGEEEGEEEGVGEEDALSVEAAVARARVELASLESAVDSGDMAVAFAVQWSAARAVCALLGDAERARCETEAEAALAFEALCMAEIDSSNTAPVDLEHADAAVDGVVRGADSPPPCRSVWNDAREAIESLSRGGAPDAAACASEWSLRRTDAQQLYNGRAVSHRALQASPSISTPVDLALVARVRRVLTTASEHLATLQLINETLSLRLVESPERPQRHVTGRTAPSDANASVAAGGDAHVIVAAQTSHVDPRAIEKLLREVASSPDLSIEATQVTTHVTAPAVTSDVDAPATNDRPSVNIGSADVGAPAVTLIVTDEDGTLVASRTDADAALAELEQARAQVHAAEKEIDRLRGAVGGLEDVVAALRAEESHRSAHLALTDDLLRDIDALGERLTENELLRKELESTLSETRGRLTESELLRTELESTLSETRGQLTESELLRTELESTLSETRGGLTESEQLRTALESTLSETRGRLTESELLRTELESTLSETRGRLESERRQWWAERAEVEEENAAVRAENAQLRVDLGEVIETNDVLGARVDEYKLQLSALVKELNALQSQSPSTAAPNATPVRRSPTGGDRVRRKRRSSIEMTIAVTDEDGRRLSAEHVEVPVVTAESDSKLRRRRDSVTLVVTDVDGSQVFREEALVQPGALDDSDDSSEHDAADTAQSEYASGVPGRDEDSAVSDGEWELSAKLRTATATIERLEHRQSEMSEELKDLRTVRSVLEDALLSTKDRAAAAEEELEPLRTRITDLDCMRRTMTESLEADLRGAQATATSLEEALVDARTRAAAAEKDTAELRLRVAELDEVIEGLQEEVADGASKQAMLLVELDRVRGLEADARRRLEELHDGGKRVAQGALAPTGGDDADNDSASASASASDADAAMRRLTREVTDLREQLTVSRTIAHEREQVCNSLATELDERALMLRELEKQLAYADSKLQENGELRLRVAHADDATRAALTECEALRTAVVELNLAVESANSSRDALQSTIGARDLESASLASELRRVEGELAEMRRLLEDAEQREADLRVRVSVFEKELHQRDFALGELERRNSVLDDQIADARADVDSASDEVEQVHDQLQGMWSVREGQLQADIRRLRGSYDALEAECAQLRADVMLAENARVHADSERRRLEDERNSVTLRLSDAEDKLDDRRADIATRDVFIEELKTAGDELRHKLSLLESDCGAARNALADALAAVGGGDVHDELHAELLDVALAVAARLTECWRAQSAATDGEAVLLRASRAEVDRLTAEVERLVDGESSLMDAVRARSSELASMEQSNANLTAALVDARASAQRSAETASAYAEELETLRRAMHEAEARRASMEDSLEALRVSAEAMRAALEEERGRAEDQSQLSRNIRAEFDAHVTSAEVTASQLASAREALSARDLALATAREELAEVAALLSAEKVRSSELEEALGVANDELSSCIEKLESLANSHAQLRRMTEELEALRNENHAVRLELDRAVIDRANSEAEHQSLVQTHQTLVQAHTALELRLRELSATATAKSGSALSDERAALLASELSTAKEERAEAEMRMQEFVAAGEAFGAQLESLREALDAERARSTELEDISDTLRSELDGATTRSLTLQAQLVLVASELEQLHADEKQAAKRRAKLKSRIAEKAGSLEQLSLGRRAASMQSLASGVGEPPHVAAERSGSTTPPSQSPSQSQSQSQPQSQKGGKDEGGASDTDEGGDLSERGAPSSRDEAGRAVRTTPGQTSAKDTELIDRQKADLYLRLGHTVRERHMLESTVGTLHRRIDHIQHDQNAMQESIVGVLESVEQMDGIYRARVAQSKAAGAGLDGSDTHAEAPSADDAAPSMDAALPDAFVSAPTGLLSRPVDDSPSVDTATAAVTGDVGGDVGDDVGGDDVAAAAVGTAASEQKKVSGAKKKALKAKAAAVLKAKQQGHAS* # ORIGINAL: g2881.t1 original gene structure, not modified by PASA NODE_7419_length_440_cov_32.7315_potentialcontaminant AUGUSTUS gene 2 440 . + . ID=g2881;Name=g2881.t1 NODE_7419_length_440_cov_32.7315_potentialcontaminant AUGUSTUS mRNA 2 440 . + . ID=g2881.t1;Parent=g2881;Name=g2881.t1 NODE_7419_length_440_cov_32.7315_potentialcontaminant AUGUSTUS exon 2 440 . + . ID=g2881.t1.exon1;Parent=g2881.t1 NODE_7419_length_440_cov_32.7315_potentialcontaminant AUGUSTUS CDS 2 440 . + 1 ID=cds.g2881.t1;Parent=g2881.t1 #PROT g2881.t1 g2881 YIYDFPASIGTGDGTTIQTLFGAKNKEYNQAMNQALYSVYSYPNTVLAIFGGLLIDKYIGLRKSMLLFVALVLSGSAFFLLGVCVANYPLMLFARVLFGLGGESLSVAQSAFVARWFRGGRGMALAFGITISFSRVGSSFNFLFSP # ORIGINAL: g3133.t1 original gene structure, not modified by PASA NODE_5901_length_685_cov_49.218_potentialcontaminant AUGUSTUS gene 1 584 . - . ID=g3133;Name=g3133.t1 NODE_5901_length_685_cov_49.218_potentialcontaminant AUGUSTUS mRNA 1 584 . - . ID=g3133.t1;Parent=g3133;Name=g3133.t1 NODE_5901_length_685_cov_49.218_potentialcontaminant AUGUSTUS exon 1 584 . - . ID=g3133.t1.exon1;Parent=g3133.t1 NODE_5901_length_685_cov_49.218_potentialcontaminant AUGUSTUS CDS 1 584 . - 0 ID=cds.g3133.t1;Parent=g3133.t1 #PROT g3133.t1 g3133 MDLWKSPEEIFEAVVTNVHKMLVYRRAIPENQPKPSWSDRLNVWEMSAYDQGKIVVLFVYEELGKKLLTSDRLDAFLKESNDNLLRHRIAILMGDSNRELKKSIKTVVDVAKQSGNFEYFYEWQFMMNLMDHVAISKHEISGDADCEELMQRNKAQYLPKMLSNDPVAAYLGLNCYLADQNVKKKFRLIRIERD # PASA_UPDATE: g12729.t1, single gene model update, valid-1, status:[pasa:asmbl_1382,status:12], valid-1 NODE_1371_length_11722_cov_42.6829 . gene 11082 11573 . - . ID=g12729;Name=g12729.t1 NODE_1371_length_11722_cov_42.6829 . mRNA 11082 11573 . - . ID=g12729.t1;Parent=g12729;Name=g12729.t1 NODE_1371_length_11722_cov_42.6829 . exon 11414 11573 . - . ID=g12729.t1.exon1;Parent=g12729.t1 NODE_1371_length_11722_cov_42.6829 . CDS 11414 11573 . - 0 ID=cds.g12729.t1;Parent=g12729.t1 NODE_1371_length_11722_cov_42.6829 . exon 11082 11204 . - . ID=g12729.t1.exon2;Parent=g12729.t1 NODE_1371_length_11722_cov_42.6829 . CDS 11125 11204 . - 2 ID=cds.g12729.t1;Parent=g12729.t1 NODE_1371_length_11722_cov_42.6829 . three_prime_UTR 11082 11124 . - . ID=g12729.t1.utr3p1;Parent=g12729.t1 #PROT g12729.t1 g12729 MFILPAAKDLSDQMLRAIPLQRFGTVDDIANATVFLCSPAASYVTGAILVVDGGAWLTTQGLFYPDSLEFFLNSSSSKL* # PASA_UPDATE: g12726.t1, single gene model update, valid-1, status:[pasa:asmbl_1383,status:12], valid-1 NODE_1371_length_11722_cov_42.6829 . gene 281 853 . + . ID=g12726;Name=g12726.t1 NODE_1371_length_11722_cov_42.6829 . mRNA 281 853 . + . ID=g12726.t1;Parent=g12726;Name=g12726.t1 NODE_1371_length_11722_cov_42.6829 . five_prime_UTR 281 282 . + . ID=g12726.t1.utr5p1;Parent=g12726.t1 NODE_1371_length_11722_cov_42.6829 . exon 281 435 . + . ID=g12726.t1.exon1;Parent=g12726.t1 NODE_1371_length_11722_cov_42.6829 . CDS 283 435 . + 0 ID=cds.g12726.t1;Parent=g12726.t1;5_prime_partial=true NODE_1371_length_11722_cov_42.6829 . exon 695 853 . + . ID=g12726.t1.exon2;Parent=g12726.t1 NODE_1371_length_11722_cov_42.6829 . CDS 695 748 . + 0 ID=cds.g12726.t1;Parent=g12726.t1 NODE_1371_length_11722_cov_42.6829 . three_prime_UTR 749 853 . + . ID=g12726.t1.utr3p1;Parent=g12726.t1 #PROT g12726.t1 g12726 GTVETPSLQDRINQHQDPNQARKDFIARQKMGRLGTAEEIAHCCVYLASNESAYTTGTEFVIDGGWSV* # PASA_UPDATE: g12727.t1, single gene model update, valid-1, status:[pasa:asmbl_1381,status:12], valid-1 NODE_1371_length_11722_cov_42.6829 . gene 864 7928 . - . ID=g12727;Name=g12727.t1 NODE_1371_length_11722_cov_42.6829 . mRNA 864 7928 . - . ID=g12727.t1;Parent=g12727;Name=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 7867 7928 . - . ID=g12727.t1.exon1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 7867 7928 . - 0 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 5231 7721 . - . ID=g12727.t1.exon2;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 5231 7721 . - 1 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 4877 5036 . - . ID=g12727.t1.exon3;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 4877 5036 . - 0 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 4073 4537 . - . ID=g12727.t1.exon4;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 4073 4537 . - 2 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 3234 3870 . - . ID=g12727.t1.exon5;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 3234 3870 . - 2 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 2819 3023 . - . ID=g12727.t1.exon6;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 2819 3023 . - 1 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 2528 2632 . - . ID=g12727.t1.exon7;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 2528 2632 . - 0 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 2262 2381 . - . ID=g12727.t1.exon8;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 2262 2381 . - 0 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 1833 2070 . - . ID=g12727.t1.exon9;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 1833 2070 . - 0 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . exon 864 1622 . - . ID=g12727.t1.exon10;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . CDS 1456 1622 . - 2 ID=cds.g12727.t1;Parent=g12727.t1 NODE_1371_length_11722_cov_42.6829 . three_prime_UTR 864 1455 . - . ID=g12727.t1.utr3p1;Parent=g12727.t1 #PROT g12727.t1 g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g12728.t1, single gene model update, valid-1, status:[pasa:asmbl_1384,status:12], valid-1 NODE_1371_length_11722_cov_42.6829 . gene 9234 10772 . + . ID=g12728;Name=g12728.t1 NODE_1371_length_11722_cov_42.6829 . mRNA 9234 10772 . + . ID=g12728.t1;Parent=g12728;Name=g12728.t1 NODE_1371_length_11722_cov_42.6829 . five_prime_UTR 9234 9267 . + . ID=g12728.t1.utr5p1;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . five_prime_UTR 9713 9722 . + . ID=g12728.t1.utr5p2;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . exon 9234 9267 . + . ID=g12728.t1.exon1;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . exon 9713 10140 . + . ID=g12728.t1.exon2;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . CDS 9723 10140 . + 0 ID=cds.g12728.t1;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . exon 10484 10772 . + . ID=g12728.t1.exon3;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . CDS 10484 10587 . + 2 ID=cds.g12728.t1;Parent=g12728.t1 NODE_1371_length_11722_cov_42.6829 . three_prime_UTR 10588 10772 . + . ID=g12728.t1.utr3p1;Parent=g12728.t1 #PROT g12728.t1 g12728 MGRYSTEPDNVAKSAKAQGSYLRVHYKNTREAAAAIKGMGVRKAIKYLEAVKEHKRIIPYTRHTGGVGRHGQTKEFKTPGSLGRWPEKSAEFLINLLRNLESNAEVKGLDVEALNLTHVQVNRAPKMRRRTYRAHGRINPYMSSPCHIELIAAEKAEAVAKPTEGALVEKKKK* # ORIGINAL: g2914.t1 original gene structure, not modified by PASA NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS gene 2 1562 . + . ID=g2914;Name=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS mRNA 2 1562 . + . ID=g2914.t1;Parent=g2914;Name=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS exon 2 495 . + . ID=g2914.t1.exon1;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS CDS 2 495 . + 0 ID=cds.g2914.t1;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS exon 832 937 . + . ID=g2914.t1.exon2;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS CDS 832 937 . + 1 ID=cds.g2914.t1;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS exon 1080 1269 . + . ID=g2914.t1.exon3;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS CDS 1080 1269 . + 0 ID=cds.g2914.t1;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS exon 1441 1562 . + . ID=g2914.t1.exon4;Parent=g2914.t1 NODE_4479_length_1562_cov_21.0121_potentialcontaminant AUGUSTUS CDS 1441 1562 . + 2 ID=cds.g2914.t1;Parent=g2914.t1 #PROT g2914.t1 g2914 DAAGDKCPLPVRVRFPAEVSQNASPSSRSLPVSSTGGNNAANASHQPSPMSGRGSMEEKGVRGAKSSTTTVSDCTDSAADAVEGAVQDSRTIASSEYSRNMMAAGVLSPSSTGAFVVGGGGNEPVFVRVSCGGEHTIATSQSGQLWSWGSGPQLGHGPVAKESARPARVRGLETVELVDVCCGAWHTMALVRRRETEHSEFDPPSTMVLTWGRGDAGQLGHGDTLDCVLPRIVHALLNRGVVQIAAGVTHSLALTSFSDVLSWGTGLDGQLGLHDVLETADPRTIIGLKNRAVIAIAAGAHHTL # PASA_UPDATE: g9970.t1, single gene model update, valid-1, status:[pasa:asmbl_309,status:12],[pasa:asmbl_310,status:12], valid-1 NODE_1080_length_14113_cov_39.8622 . gene 3864 7229 . + . ID=g9970;Name=g9970.t1 NODE_1080_length_14113_cov_39.8622 . mRNA 3864 7229 . + . ID=g9970.t1;Parent=g9970;Name=g9970.t1 NODE_1080_length_14113_cov_39.8622 . five_prime_UTR 3864 4637 . + . ID=g9970.t1.utr5p1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . exon 3864 5112 . + . ID=g9970.t1.exon1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . CDS 4638 5112 . + 0 ID=cds.g9970.t1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . exon 5352 6072 . + . ID=g9970.t1.exon2;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . CDS 5352 6072 . + 2 ID=cds.g9970.t1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . exon 6467 6576 . + . ID=g9970.t1.exon3;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . CDS 6467 6576 . + 1 ID=cds.g9970.t1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . exon 6837 7229 . + . ID=g9970.t1.exon4;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . CDS 6837 7120 . + 2 ID=cds.g9970.t1;Parent=g9970.t1 NODE_1080_length_14113_cov_39.8622 . three_prime_UTR 7121 7229 . + . ID=g9970.t1.utr3p1;Parent=g9970.t1 #PROT g9970.t1 g9970 MRRRRTNLVLFGVAIVLAWVIAVQVYGVRMLTASMGVPGTRNERQQGHALADANGDADDRGDSDHDDPRDAGGGHVGRTLGAGSLLRVATLPGDASGAHRILHGYAAPDAAGTGRVFAVDRASFYSAPWGIDIAMHATANHLHNVIDVARGWDGEISMAVFDPEVSANTLALIDGVRACSPDVASKVTFHMVYPRDIAARKKTIRLLRKKHRVADGVPTTPLPLDECRMWAIQYGVRASGAAAGDLLDGRGGRGAGDRRQGLADISEDNEVLMERGGADGGNYALTFPYPNNLLRNVARRGTRSAFVLAIDADILPAPGLQDLFLSVVRLGNDAQGGRGREEGDGDVPNGDEDGGLERRERAKFEQKIFVLPAFEKSENRAFPRKFEDILAGLREGTVRPFYNATCWKCQQHTDYALWQEESADPSVLYYQRPWKDPWEPFYIGPRSVPLYDERFRQYGFNRISQVCEAWVAGFDFHVLTRAFVVHDGFKEPGQFHAQKNAENDANRLHFRAMKQELKTRYPQSRRRCY* # ORIGINAL: g9972.t1 original gene structure, not modified by PASA NODE_1080_length_14113_cov_39.8622 AUGUSTUS gene 10417 13893 . + . ID=g9972;Name=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS mRNA 10417 13893 . + . ID=g9972.t1;Parent=g9972;Name=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS exon 10417 11883 . + . ID=g9972.t1.exon1;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS CDS 10417 11883 . + 0 ID=cds.g9972.t1;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS exon 12160 12249 . + . ID=g9972.t1.exon2;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS CDS 12160 12249 . + 0 ID=cds.g9972.t1;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS exon 12440 13603 . + . ID=g9972.t1.exon3;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS CDS 12440 13603 . + 0 ID=cds.g9972.t1;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS exon 13756 13893 . + . ID=g9972.t1.exon4;Parent=g9972.t1 NODE_1080_length_14113_cov_39.8622 AUGUSTUS CDS 13756 13893 . + 0 ID=cds.g9972.t1;Parent=g9972.t1 #PROT g9972.t1 g9972 MFAPFTKLFDGGPPPDGAAPQTKPRTVSTVSTNSETSVGSAASAGAAHGADAEAATPASVDSGSSRRWFSFGSSKDEAVAAASAAVSGTSPPNASGGNAGNVGAGLRSPSTASTASSSVPAGTAVRPGGDSAEGMLIDVGDGSHGGTHVTLRSTAGAIEAAFPQPQQQEQPRPLRTLPPPSVAFVDEHGDDPPHDGSGGGGDGFERFPVRYLGWLEVGKGKGQLSPALAMLRLSQVESAGTRAVLLVSTWGIRVIDETTREPVIERPIQKIASCLSSDNKEVIAIVATSEADGSKHACFVFRAGKHTHRITEATGRAFTQAYEKKVASGGVTPEAARRARAVSAPAPSFAAADKQRSATAPPQLSGPKGGVGGVSGGQSQGGPGEAECCGRSDCPALQLRQLRSQLQSLSTEDARRVITELIETQLSIAERDVLFRGAKRSSAHFDAVPSAEDEYKSMLVLVEGVFERRFVTHRQQMQQQQLMAIGENDEEDKSSKIASSISTLKKQWATSLESLMGKVERARSNRLSLVRTDEEGPLYPRGSGSLQPAVKEGDSDSVNEGGRSSPGPSSTPRDSVTSIGSTSSTKDGARRSWRRAIFKSVLLNQVEREVEEARAHGDDGAPQLTAPSSPLPPGIDLDGDDGDGTQLLSPSVASPGTHSHHAAMQSASTNALDEFDPIAKTLGSASLDGSAHHLAVPDTGKPRKSSEELLLLWRRAASLTAEEGSVDPEEARLEEVWKKRLGENDEAQLAAFITSMGIGDKKGASGDTASVQSLPGSAANGAGGSGGVGGDSDAGGHHTPAGHHGHTAHHGGKRHKQRKRLTAEDLARLMSEGVPRKYRTRAWRLIVSCRNPSGKMSIPDISYSALLVESSPHEPQIRQDIGRTYPDHPLFAQKDGEGQTALFNIMKAYSVLDPEVGYCQGLTFVGGAILMHLPEVRAVAVGCHKDRAMKTR* # PASA_UPDATE: g9971.t1, single gene model update, valid-1, status:[pasa:asmbl_311,status:12], valid-1 NODE_1080_length_14113_cov_39.8622 . gene 7414 9568 . - . ID=g9971;Name=g9971.t1 NODE_1080_length_14113_cov_39.8622 . mRNA 7414 9568 . - . ID=g9971.t1;Parent=g9971;Name=g9971.t1 NODE_1080_length_14113_cov_39.8622 . five_prime_UTR 9554 9568 . - . ID=g9971.t1.utr5p1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 9423 9568 . - . ID=g9971.t1.exon1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 9423 9553 . - 0 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 9208 9328 . - . ID=g9971.t1.exon2;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 9208 9328 . - 1 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 8994 9086 . - . ID=g9971.t1.exon3;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 8994 9086 . - 0 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 8562 8718 . - . ID=g9971.t1.exon4;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 8562 8718 . - 0 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 8198 8281 . - . ID=g9971.t1.exon5;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 8198 8281 . - 2 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . exon 7414 7764 . - . ID=g9971.t1.exon6;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . CDS 7481 7764 . - 2 ID=cds.g9971.t1;Parent=g9971.t1 NODE_1080_length_14113_cov_39.8622 . three_prime_UTR 7414 7480 . - . ID=g9971.t1.utr3p1;Parent=g9971.t1 #PROT g9971.t1 g9971 MDALQGGWFSEINEQWPGQALSLQTEEVLHTQTSAFQDISVLKSKAYGTVLVIDGAIQCTTRDEFSYHEALAHTTLNSHPCPKNVLVVGGGDGGIVREVLKHASVESVMLCEIDEAVIAVARKYLPDVACGLDDPRVRVVVGDGCEFVADASDGSFDVVITDSSDPVGPASGLFGRAYYESVRRALRPDGIMCAQGESVWLHLDLLRTVVSCCKEFFPTVAYAQVAVPTYPCGGIGFVLASNARDVAFATPLRTWTGAESDALGLRYYSADVHRASFALPRFAQTALGL* # PASA_UPDATE: g7238.t1, single gene model update, valid-1, status:[pasa:asmbl_8147,status:3], valid-1 NODE_554_length_21340_cov_41.8611 . gene 14408 17007 . + . ID=g7238;Name=g7238.t1 NODE_554_length_21340_cov_41.8611 . mRNA 14408 17007 . + . ID=g7238.t1;Parent=g7238;Name=g7238.t1 NODE_554_length_21340_cov_41.8611 . five_prime_UTR 14408 14487 . + . ID=g7238.t1.utr5p1;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . five_prime_UTR 14604 14630 . + . ID=g7238.t1.utr5p2;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . exon 14408 14487 . + . ID=g7238.t1.exon1;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . exon 14604 15497 . + . ID=g7238.t1.exon2;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . CDS 14631 15497 . + 0 ID=cds.g7238.t1;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . exon 15770 15868 . + . ID=g7238.t1.exon3;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . CDS 15770 15868 . + 0 ID=cds.g7238.t1;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . exon 16283 17007 . + . ID=g7238.t1.exon4;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . CDS 16283 16855 . + 0 ID=cds.g7238.t1;Parent=g7238.t1 NODE_554_length_21340_cov_41.8611 . three_prime_UTR 16856 17007 . + . ID=g7238.t1.utr3p1;Parent=g7238.t1 #PROT g7238.t1 g7238 MAKKGKGPKGQAPKSQGGTAPATAASSSSKATPAAIPATAEEPHIDKTPVTVHTNVHTEVDASAHTTEPVVVDAPKAKTPKKAAADGHHATPHKTEQPASIATPAVAQEPQHLKPDVALSHKTHHRDAKAIGHKEQRALVFAASFPRCNGVNVMVARKLERRPPHLSMTALTICQDAPSEYHGSPVVSLKGAHVNGACLGNPLFLIGVTWQLFFLFWRLRPDIVYVHSVDIYCIPLLVLSRLFRARSVFCYHTEILTFLNFYGLSPRVLQAIKAYYAILLYACCKLAEQVVSPSEGSLKYLEDSFSVHRRKLSKWPYFVDTQVFHPVPRDAAVRARFCPPNKALILFCGRIAPEKKIEDSLEMISRHPEDFHMAIVGPASNPKYMDMLKHKYGGLFTWADALPQRELVSIYAAADLVINACPADTFGLSIMEAVACGVPVLAAVSDGSREILTPERKIGHIYSSIEEGIKFLVEWRRSAAIQKELIANCKTFAEVWSIEPYLQFMWKFAPAP* # PASA_UPDATE: g7235.t1, single gene model update, valid-1, status:[pasa:asmbl_8145,status:3], valid-1 NODE_554_length_21340_cov_41.8611 . gene 337 4339 . + . ID=g7235;Name=g7235.t1 NODE_554_length_21340_cov_41.8611 . mRNA 337 4339 . + . ID=g7235.t1;Parent=g7235;Name=g7235.t1 NODE_554_length_21340_cov_41.8611 . five_prime_UTR 337 530 . + . ID=g7235.t1.utr5p1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . exon 337 730 . + . ID=g7235.t1.exon1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . CDS 531 730 . + 0 ID=cds.g7235.t1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . exon 947 1027 . + . ID=g7235.t1.exon2;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . CDS 947 1027 . + 1 ID=cds.g7235.t1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . exon 1209 1302 . + . ID=g7235.t1.exon3;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . CDS 1209 1302 . + 1 ID=cds.g7235.t1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . exon 1525 1683 . + . ID=g7235.t1.exon4;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . CDS 1525 1683 . + 0 ID=cds.g7235.t1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . exon 2013 4339 . + . ID=g7235.t1.exon5;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . CDS 2013 3941 . + 0 ID=cds.g7235.t1;Parent=g7235.t1 NODE_554_length_21340_cov_41.8611 . three_prime_UTR 3942 4339 . + . ID=g7235.t1.utr3p1;Parent=g7235.t1 #PROT g7235.t1 g7235 MGSLTLPTKEAATIVSWLIGPGDRFTTGELIANYRVNGCQTDAVFKATCDGRVLRITRAEGSAVGAGQGVLDYECAHSVVLHGLCADCGVDLSSELAEQDDHYGKNAPQHFSMVHGVPGLVVHKNEAHRIAGNEERRLRASKKLTLIVDLDQTLIHATTQSAPWINEKLTQPPKEGIKEMVSFELPGSPIVYYVKTRPHVATFLSSLADKYEMHIFTMGTRPYAISVAAAIDPKGDYFGGRILSREDVGGIADTKTSRLQHLFPTGDSMVVIVDDRADVWESCPNLVRIRPYVYFLGAADVNALPKDKAKTEATNGPDAPPLLVSAAEDDDNHLLSIRDFVSQVHDNFYAPPDGETVADADPLARDVRQIVPALEHRALDGVSIVFSGVIPLHETRPERHPIWARAVGMGAVCSNSLHSEATHIVAAKPGTDKVTAAVNCGGMYIVHVAWLTASIDRHCRADERAYPLESVPVLPARMPIDNDDDFDNDDDDFDDDADKDAGLNGGHDRATPDDADSEGAREGSYIPGDAEGEMDVSEANGSGSVVDDVAEAILREIEEKDNAALEEVNAEPLLRSMAVSADSGPAASVDVDLVVDAVFSSMGVMIPERKASVALNRSTSRRSVSGERPLSATVTPIADRNAPESPNTKRRRRSRRLSQMDFAEMDREVLEVMGSDGGSESHGSSDDDAAGDDDDDADADSAMDADADAGSASSSSAERKRKRDTADEDGEDGASRSSAGRDLRAHRSEHEGGSSRRGESGDLDASSAPPLSSDRDSGDDVVGDAADDADGADDADEFDSSTASSSDDDDDDDDDADGGL* # ORIGINAL: g7237.t1 original gene structure, not modified by PASA NODE_554_length_21340_cov_41.8611 AUGUSTUS gene 8305 13788 . + . ID=g7237;Name=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS mRNA 8305 13788 . + . ID=g7237.t1;Parent=g7237;Name=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 8305 8814 . + . ID=g7237.t1.exon1;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 8305 8814 . + 0 ID=cds.g7237.t1;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 9040 9368 . + . ID=g7237.t1.exon2;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 9040 9368 . + 0 ID=cds.g7237.t1;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 9501 10098 . + . ID=g7237.t1.exon3;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 9501 10098 . + 1 ID=cds.g7237.t1;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 10237 13788 . + . ID=g7237.t1.exon4;Parent=g7237.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 10237 13788 . + 0 ID=cds.g7237.t1;Parent=g7237.t1 #PROT g7237.t1 g7237 MADTRSMMSFAQSGAGSSLAGSSAMGAARTSSAERLFRAAKNGMFGILFVMVKDATLSQFWVVIELLIDLAQVLGFPFNVYHQHFAWNQGQSSWFQDIVRPFSFETYIDSSIAVFFVAVGILLVLLANAAFVGYSFSSSKYKMMWTLTSLRFISALVSSIFFIPLLGILTARLRCEEGSECWTGFDLFTKILALVVGIAFLFLSLMCCICFSDPNPASRSVLSRPHSRIDLFTSAVRATLTIVFTLLTGSNTNQWVLTGILLAAGVSTASLYTWYLPCYRFRYSVAKASTFWILTWAAICLLVVQVQGTQENQAFVFFLIGSPLVVYATHSAAAWRRKRIETTPCNKLRSALDIELKVRLHLIAAGVFFTYRPASSQTDACVDMDADNADMVDEAVARHAIAEANSWYRAASRRNPRSSLLHLFWSNHHQYFMGNSQLALAELQAAEELSPRLDEEFFIYRRRKMAQDEIAGGKGDVIQFIKYQKNMTDAQRHDIRATKAQLALWSELIKTQPDPMSLNSIARRVTSSITRAQTGYQELIRINPNAPQTLRMYAGFLIDVVHDTTTAETLIARAAEIDDSTGADGSDKGTARGNALDMGTMGVAEMLMDDRHATITMSGDLHKEGSVVEMNTAACRLLGYRPRELIGRNIAAIVPDPFSSKHNSYIRRYLEEGSSRWMDRAVHVYALHKSGYCVPIVMLVKQMCSPTGGILFIAAMKAKIGSSHTGNSGDNDTIEERTLLVGRDGAIVTCTAGCGSLLGIGSEQFASGAPRMPASKFIPDYASLSTSAAAAATATAAADTASETPQLNSNDFADNCKFDGVCIVTSRGTAFGTVSIRTIRSSSGEVSIVIKIDMATERRISESLGSPLRSSPRPRALSVSSSQCRRSDDNGMPALLPLETYAELNTPRSIPDIVYPKTIDAEDTPVLNAPTAAPNSERRIFKTQSKVQFNAVDSVSDERRSSSDQEVAIEMEDVGGSQHAGQTEAEANAAVGSYAEADEYDDEVPEKARSVTSGSHASSTASRLDNIREQILYGSGAGTGRIGTVLRVSFLLAAVGIIAIAAVSLVKVRDETKSYATAVDDVISASKRRLQTYDMIDATRLLFLKGSNLYDQYTETGLRNRLNRSGNDLNTIHQQLFAGFGSLPEEHKRLYTLPTIPIAMTEGGEPTTRMYNLWNLLDTLVMEARMLAQLPLADFVAQPPSVYFITKNILTSVWNALEQSMNLYEAQATTANNNARETAKVLFIIALAFVLISTVFVLLPLLALVEWKQTDILWTFLSVPRPVGRALAERCLNRLQARESLDDGFDESMGDGFDDNYRDLKDTAEKDEDEDAGRMDADTSAKSPLGLAFGRTAGLQGVRLSRRGGKHRSARRPPTVGQRIRLLGINQAGSLVRIAALLIASIVFFCIMYALVTRFIDDNSGTAISVNNSNRRTYQTLVSFHLLREIVYANTTEDVDRLDSLFSDASTKALQLHTNMLYGNATLGILPSATEPRFQTILFENGCIDTSPVDCSTFNRGLLTSGLSVSLQRFLRDVTELRALAVILPIPRTPDMVKPFYSQPNFVMEERFGQRYLRPSLIRMTELFGTTLTQDVNVLNADHLIGTVVFCCVVGAIYVALLMPIPGRASAEAKRMQVLLLCVPPEMLRTTLAFSKIIKANYASSR* # PASA_UPDATE: g7236.t1, single gene model update, valid-1, status:[pasa:asmbl_8146,status:12], valid-1 NODE_554_length_21340_cov_41.8611 . gene 4985 6192 . + . ID=g7236;Name=g7236.t1 NODE_554_length_21340_cov_41.8611 . mRNA 4985 6192 . + . ID=g7236.t1;Parent=g7236;Name=g7236.t1 NODE_554_length_21340_cov_41.8611 . five_prime_UTR 4985 4991 . + . ID=g7236.t1.utr5p1;Parent=g7236.t1 NODE_554_length_21340_cov_41.8611 . exon 4985 5521 . + . ID=g7236.t1.exon1;Parent=g7236.t1 NODE_554_length_21340_cov_41.8611 . CDS 4992 5521 . + 0 ID=cds.g7236.t1;Parent=g7236.t1 NODE_554_length_21340_cov_41.8611 . exon 5775 6192 . + . ID=g7236.t1.exon2;Parent=g7236.t1 NODE_554_length_21340_cov_41.8611 . CDS 5775 5859 . + 1 ID=cds.g7236.t1;Parent=g7236.t1 NODE_554_length_21340_cov_41.8611 . three_prime_UTR 5860 6192 . + . ID=g7236.t1.utr3p1;Parent=g7236.t1 #PROT g7236.t1 g7236 MARISSILRRIVDSSSKPFPVVFAGRNVLRTKARIVTKEEIASGECEAIAERMTATMRHFHGLGLSAPQVDLPLRMFVAEITEEAIKNMQLIPTDKLDLSVFVNPKVRPVKGTKTLIMREACLSVPNLSALVPRYESIEVDACDLSGRPFTKRMHGYQARVIQHEADHLDGVLFVDRMFPRSLAYGFDEKTHEIPSDWRSKFPP* # ORIGINAL: g7240.t1 original gene structure, not modified by PASA NODE_554_length_21340_cov_41.8611 AUGUSTUS gene 20084 21243 . + . ID=g7240;Name=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS mRNA 20084 21243 . + . ID=g7240.t1;Parent=g7240;Name=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 20084 20227 . + . ID=g7240.t1.exon1;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 20084 20227 . + 0 ID=cds.g7240.t1;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 20373 20447 . + . ID=g7240.t1.exon2;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 20373 20447 . + 0 ID=cds.g7240.t1;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 20559 20753 . + . ID=g7240.t1.exon3;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 20559 20753 . + 0 ID=cds.g7240.t1;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS exon 20947 21243 . + . ID=g7240.t1.exon4;Parent=g7240.t1 NODE_554_length_21340_cov_41.8611 AUGUSTUS CDS 20947 21243 . + 0 ID=cds.g7240.t1;Parent=g7240.t1 #PROT g7240.t1 g7240 MAERGADKAPLLNEYKIAFFKRRWPQTLLGGVRFPAGDDVPAYAYIWQILLLCLPVGLGILFSALANNGSLTEASAGAICGSIIVAIDGAVRLISFLVDRKALRSVGPIPTIDAEKGVKDALAEEDEIPFDGVFGRETLAFVVPPRKHALIVLVQLCATWLMCAGSVVYLVPQYMSGHSVAGGASTTGAGAWALCVFGWIAVGVSQYPLKGPMPPEPGKFRDYDPFEINSLARPFYV # PASA_UPDATE: g7239.t1, single gene model update, valid-1, status:[pasa:asmbl_8144,status:12], valid-1 NODE_554_length_21340_cov_41.8611 . gene 18590 19518 . - . ID=g7239;Name=g7239.t1 NODE_554_length_21340_cov_41.8611 . mRNA 18590 19518 . - . ID=g7239.t1;Parent=g7239;Name=g7239.t1 NODE_554_length_21340_cov_41.8611 . five_prime_UTR 19488 19518 . - . ID=g7239.t1.utr5p1;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . exon 19306 19518 . - . ID=g7239.t1.exon1;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . CDS 19306 19487 . - 0 ID=cds.g7239.t1;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . exon 19098 19164 . - . ID=g7239.t1.exon2;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . CDS 19098 19164 . - 1 ID=cds.g7239.t1;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . exon 18590 18755 . - . ID=g7239.t1.exon3;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . CDS 18615 18755 . - 0 ID=cds.g7239.t1;Parent=g7239.t1 NODE_554_length_21340_cov_41.8611 . three_prime_UTR 18590 18614 . - . ID=g7239.t1.utr3p1;Parent=g7239.t1 #PROT g7239.t1 g7239 MLVRQATFTIMAPKLPQYESYEKFWPFYLREHKKPATRAFHYVATVSASACVGLAVAESWKYLLLAPLAGYSFAWFSHFFIEKNKPATFKAPLWSLISDYRMFFHFITFSLDAQLEAAGVIPAKKTQAQ* # PASA_UPDATE: g14142.t1, single gene model update, valid-1, status:[pasa:asmbl_6547,status:12], valid-1 NODE_3790_length_2753_cov_44.3143 . gene 1 1578 . - . ID=g14142;Name=g14142.t1 NODE_3790_length_2753_cov_44.3143 . mRNA 1 1578 . - . ID=g14142.t1;Parent=g14142;Name=g14142.t1 NODE_3790_length_2753_cov_44.3143 . five_prime_UTR 1377 1578 . - . ID=g14142.t1.utr5p1;Parent=g14142.t1 NODE_3790_length_2753_cov_44.3143 . exon 1 1578 . - . ID=g14142.t1.exon1;Parent=g14142.t1 NODE_3790_length_2753_cov_44.3143 . CDS 1 1376 . - 0 ID=cds.g14142.t1;Parent=g14142.t1;3_prime_partial=true #PROT g14142.t1 g14142 MRKCDWSLVTSVSRSAEGSAGVFFVTFADGHRIAIKGTTRLLQEHIATTLFRRISPLIGGADAPETRIVQYGEDVEPHRVGDDASSCSSEWSAITEAVLRVAGKDTPDGIALKKQLNRAFYLVMDFIPDASDLCTWLFTHHANRERGSRLIDCGVLKEIGGMMAFDVLINNSDRLPLLWNNEGNLGNILISRTGIDGVWRAYAIDQAIATIDATKPAAEKIFSAYSTRVNRLISSMKASVSTGGSVCPEINAVATAIANWTVGSVVLEETEALYLQRALEAGLLALAEGVNMERDVLPIVESSVGCVKIDWENVWRSMCGGVHARFFADVLALMRDNVDALRLCAADPRVESAAVSASASPLLRASESNNVNVDADGDHDAISAPLLQSTARVADSCEGTDYDRVCDRKNSLVDDTNAISSIGGQSNVVEENRQCSSDACIANVGLEVRTADSIVLPP # ORIGINAL: g1208.t1 original gene structure, not modified by PASA NODE_3194_length_4052_cov_85.1818 AUGUSTUS gene 1751 4052 . - . ID=g1208;Name=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS mRNA 1751 4052 . - . ID=g1208.t1;Parent=g1208;Name=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS exon 3631 4052 . - . ID=g1208.t1.exon1;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS CDS 3631 4052 . - 0 ID=cds.g1208.t1;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS exon 2587 3466 . - . ID=g1208.t1.exon2;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS CDS 2587 3466 . - 1 ID=cds.g1208.t1;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS exon 2211 2408 . - . ID=g1208.t1.exon3;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS CDS 2211 2408 . - 0 ID=cds.g1208.t1;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS exon 1751 1831 . - . ID=g1208.t1.exon4;Parent=g1208.t1 NODE_3194_length_4052_cov_85.1818 AUGUSTUS CDS 1751 1831 . - 0 ID=cds.g1208.t1;Parent=g1208.t1 #PROT g1208.t1 g1208 QQQQQQQQQQQQQQQQQQQQQQQQQTKKVGDVISHIVHFQQSDYSSVPRVDSLIDYLRTSAKYIDELQTFVEDANFRLSLEREPRESVAPASTGKVPTGKEREREREKEIKDKWAASPGSPRKISADGQPTFFPSGVQGHRVAGVKSSHRRAQSLVEATGKHSLNLPPSVSRGDSAVSLQLGQPSTVQVTGGLAPRQNLLDDSYDSVAAASLLSSSGSQLTRDSSSSLAVSSSSLVGSNSLLSPNSSTNSGQLLAPLMPPPASAPLRMPLTPSGAAFVSTTPHTHPHTQALQGLAPPSLSQPSSHSLSVPVPMQSQRSNGSFPLEGGSPLTSGMGHGMGNGSLGAYPVNKTLSLGGGGGIHDRRVSVSLESALGLNLLPPGTIILKEGILRKKNCVREGKKAANRKWRKYWVALTGDSLVFFEKKKRGAKDRSGFDRAPVGRIRVAGGVVGVPTDKRNGYEGVFQLTTGTNSSFKFEARDPDDMQRWVALVHECIQNCQKCLWTECGDNALFHSIAYLFCVYALIF* # PASA_UPDATE: g11040.t1, single gene model update, valid-1, status:[pasa:asmbl_10183,status:12], valid-1 NODE_973_length_15220_cov_38.6437 . gene 433 815 . + . ID=g11040;Name=g11040.t1 NODE_973_length_15220_cov_38.6437 . mRNA 433 815 . + . ID=g11040.t1;Parent=g11040;Name=g11040.t1 NODE_973_length_15220_cov_38.6437 . exon 433 559 . + . ID=g11040.t1.exon1;Parent=g11040.t1 NODE_973_length_15220_cov_38.6437 . CDS 433 559 . + 0 ID=cds.g11040.t1;Parent=g11040.t1;5_prime_partial=true NODE_973_length_15220_cov_38.6437 . exon 714 815 . + . ID=g11040.t1.exon2;Parent=g11040.t1 NODE_973_length_15220_cov_38.6437 . CDS 714 796 . + 2 ID=cds.g11040.t1;Parent=g11040.t1 NODE_973_length_15220_cov_38.6437 . three_prime_UTR 797 815 . + . ID=g11040.t1.utr3p1;Parent=g11040.t1 #PROT g11040.t1 g11040 LLGRAQAHNLFVTGMTFDSTGTSVISVSADRTCAKSWPRTGGESHRMLILLAFIVVLIAVLLSFVPTVE* # ORIGINAL: g11044.t1 original gene structure, not modified by PASA NODE_973_length_15220_cov_38.6437 AUGUSTUS gene 12286 14664 . + . ID=g11044;Name=g11044.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS mRNA 12286 14664 . + . ID=g11044.t1;Parent=g11044;Name=g11044.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 12286 12793 . + . ID=g11044.t1.exon1;Parent=g11044.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 12286 12793 . + 0 ID=cds.g11044.t1;Parent=g11044.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 13076 14664 . + . ID=g11044.t1.exon2;Parent=g11044.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 13076 14664 . + 2 ID=cds.g11044.t1;Parent=g11044.t1 #PROT g11044.t1 g11044 MPAAVGPNGQVDRLQTFVDGGRYAELEEILRTQPHGKPDTRAVKSAGDSTSSQNAYKALCHHWLSLGDDGRRKCATFTDETSVLLLKRLLVQQPIALPSSTLDASTNGEDTNSDGIGCGVDGDEAGGGECDEDGAATVKLHVVPGNAPGVFGVDWRRHLLPIGRNAGYESALLLVMLRSESCGAFLRPHNRPADYGATLASTVWILLDRSIRASLVLKLTRATRVPQQAKPNTHTVKQATTTGPAVKCDAKPSARKRSRMAEEEAEVLAVTAWFNALSPQAQASILTVNVPPHITGTTSSQGTLLINSIPVSFVRTGNSTATVTVDCHRFGDMMTASMAALQGDGVGVAHMRSGDSQVDVPREVHGKTSENQQQASTCANSSKTADDIRRICELFCAHAKNAWTAAKQLEAEAAARELLLLPPSSSPAVDKTAAASKLRRKKAVVSHNSDRLNTAMPTRQCTSAECVSSESVISPEIIPTGGPASLQSGYHRTATVRKNSRSKPPPWMKLAQQHIRESAQNTGGIMATTTTTTAIPTQNGAAVAHSPTDDIVDTAPVAPTRRHSSPPFFSGSGVVLPAIFAHNRRLIDDVQIALRRCFSTQSLCHDYKLVTLMRRSGQVAAGILARHEPLADVLDAHGVASHTEREAVVAIAARTSRDAALFVSVDAKDGTTFVGPTKCTGLLAFLRRGNDGVLESVR* # ORIGINAL: g11041.t1 original gene structure, not modified by PASA NODE_973_length_15220_cov_38.6437 AUGUSTUS gene 1166 3887 . - . ID=g11041;Name=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS mRNA 1166 3887 . - . ID=g11041.t1;Parent=g11041;Name=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 3785 3887 . - . ID=g11041.t1.exon1;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 3785 3887 . - 0 ID=cds.g11041.t1;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 3150 3404 . - . ID=g11041.t1.exon2;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 3150 3404 . - 2 ID=cds.g11041.t1;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 2148 3005 . - . ID=g11041.t1.exon3;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 2148 3005 . - 2 ID=cds.g11041.t1;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 1711 1859 . - . ID=g11041.t1.exon4;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 1711 1859 . - 2 ID=cds.g11041.t1;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 1166 1507 . - . ID=g11041.t1.exon5;Parent=g11041.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 1166 1507 . - 0 ID=cds.g11041.t1;Parent=g11041.t1 #PROT g11041.t1 g11041 MTGFVLRGAKIWTPQGIFDWIAVQDGRIAGIGVEAINRRVRQIADDPIPADCASLPTQDGSGLFVLPGLHDAHIHVFLLGRSKFQVSLSGVTSVTQMQSAILEFIGRRNGESGAWLLGTGWDQDSMGLGGAFPSRSDVDAVSPDIPVVLYRACFHICLANTAALRAIGSFDPSFACPDGGSIDRDTTGAPTGIFRENAMDLFRPFVEEGMPRADRRRCLEEGLNECVAAGLTAVQSNDPAAWELYRELQRDGKVPIRVFLTIPFAEADAQHSSTPRPGDRDGLLSCHRIKLFADGSLGGETAALREPYAPKGNVSASAEEEGVVAHANGHVGEIGGCRCNHNKGILVHTPEDMARKLARSHELGYRVEVHAIGDRGAEVVLDGVRRAGMTPAHRPILTHCQILGEDLVRQMAEMGVIADVQPSFVTTDSRWVGLRLGESTPRIKYCYAWKTLIDAGITVAGGSDAPIESCSPFVGMYAAIFRALPKSTETGEPHPAWRPEESVSFASAMRMYTESAAYTAGEETTLGKLEVGYAADFVAVDRCVWDDPRQLATARVMGVWVDGVKRYL* # PASA_UPDATE: g11043.t1, single gene model update, valid-1, status:[pasa:asmbl_10184,status:3], valid-1 NODE_973_length_15220_cov_38.6437 . gene 6541 12028 . + . ID=g11043;Name=g11043.t1 NODE_973_length_15220_cov_38.6437 . mRNA 6541 12028 . + . ID=g11043.t1;Parent=g11043;Name=g11043.t1 NODE_973_length_15220_cov_38.6437 . five_prime_UTR 6541 6821 . + . ID=g11043.t1.utr5p1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . exon 6541 8813 . + . ID=g11043.t1.exon1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . CDS 6822 8813 . + 0 ID=cds.g11043.t1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . exon 8997 9242 . + . ID=g11043.t1.exon2;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . CDS 8997 9242 . + 0 ID=cds.g11043.t1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . exon 9628 10548 . + . ID=g11043.t1.exon3;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . CDS 9628 10548 . + 0 ID=cds.g11043.t1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . exon 10899 11600 . + . ID=g11043.t1.exon4;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . CDS 10899 11600 . + 0 ID=cds.g11043.t1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . exon 11854 12028 . + . ID=g11043.t1.exon5;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . CDS 11854 11982 . + 0 ID=cds.g11043.t1;Parent=g11043.t1 NODE_973_length_15220_cov_38.6437 . three_prime_UTR 11983 12028 . + . ID=g11043.t1.utr3p1;Parent=g11043.t1 #PROT g11043.t1 g11043 MGDKPPLQRGNSRKESSAANPGEGKPALSRGNSRKEKGLSIGADSPGLSRKGSKEDRSDEKRPIFTDEQRAVFRKMTVDDIEREMHNKTEAIENLSAQISDIYDPPAELQEKMETLDKERSFLRIMRDEKKKAAVLEPLRYAPLLQTYLFNAPDSINNIVMEDDDGSGTPRVKGATLFKLIERLTYDEYADHNFQRQFLLTFRTFVEPLQLLELLIARYDIGTPRQASLVDDFARKIALPVRLRVCNVLKRWVEHHYDDFEKDPELFKMMKEFISGRPAEDAVRNIFEKLGELMLKRADDAAERRRVDNLRRVEIEKEKERRQKQALESTGTPARPSADSQKVTAPSSSSTGDVDASQLQSDGGTVRSNIRVFDSGPPPPILPMLDDKGMVAGLRKTLDDLDILNFDPMEIARQMTLIEFGLYEAISPHDLSELACNSSADNSSAIVRFIDRFNKTSMWATTQIVSRPSLQSRKDALAKFIDIAECCLQLNNFNGLLELMSSLQSAPVHRLKHTWTILPSPHKQRFEELAALTSNTNNYRDYRKLISSINPPCIPYIGIYMTDLTFIRDGNPNLLPNTELINFTKRRMISAVLIEMLQYQQTPYHLADVPVLRTKLDKITHFDEQACYKQSLKIEPRNADAAVEKKKRVAFLIDTAVRGGKAKRVWAKKLCPRAIELFGDEGWAALMIEEESFDEGGPAKGKVNPIALRSAAAQQAAKAVNNNFDAVVVVGDGKTVNLCIEGYIAAGGGSKQVPFGIIAISESDDFIKTADIPADPLDALACIFDGFTVMSDVGVVQASERGGLPSRDQFFLNVCSVGTESTRVSDLANKAFVGRASLLLQSVTHGSKASNRATRMKIDDSDWMNCNMFELLVCNGKFYGSGFEIAPEACMTDGQFDIVLLEDVSMLEASRVSHLIRRGDHINNKNIHLVRGSRVVVEGIGKDGAKLDIEADGQNLGSLPATIVVLREAVALIVPRTQNNGRADSVVTRRASLRNLGALSIRRSSSLTGLNLQANLAKRNSVSSDQDYSQAGDVPARKMSNQLMRSASDTVVGQSGSRQRSKTDPEEPGGSLSRNSGIGLGALGKSTSSVRKKRIVPFGVDLEETLLREKSEIPRAFESVERYVQERVKGYPTCIVDGLMKLGSNPASHTSVSAEVDHLKYNFERRKEEAFELSQEHSPDVALCFLRAYLTCLPVPLAVGVYGELLEAGQVTDVFAEGSRDGWLESHTRETYIEVIRRMGVRNRSVLAYVVGFLRQHLYERSPKQETLRVLGQIFAPAVLGTLAETNVYQDDPLMFENDADEGQAHVLQTLVVFWDELLLPFLSKRTAS* # ORIGINAL: g11042.t1 original gene structure, not modified by PASA NODE_973_length_15220_cov_38.6437 AUGUSTUS gene 4946 5647 . - . ID=g11042;Name=g11042.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS mRNA 4946 5647 . - . ID=g11042.t1;Parent=g11042;Name=g11042.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS exon 4946 5647 . - . ID=g11042.t1.exon1;Parent=g11042.t1 NODE_973_length_15220_cov_38.6437 AUGUSTUS CDS 4946 5647 . - 0 ID=cds.g11042.t1;Parent=g11042.t1 #PROT g11042.t1 g11042 MFEAISQWAYGESYNALDLQSPQRQAAARHDIIIDEAMMRIRIAEDAAYERDKEQKRKVTKVDYSWLFPEERKRYNMPASVSMRLSELALRLTGEECTACLSRFRDLTETVDDVERIADIMLCVIEKTLADRPAETGWRASGIIRRASISNMMSSEWAEYVRSNIGSIKDAAAAPIGKVTGPIRRLSASLSTSSFSSFSLPSTAPDVRDNEPMYYVDDFDAPPITGRIEELPI* # ORIGINAL: g8733.t1 original gene structure, not modified by PASA NODE_3416_length_3518_cov_38.1966 AUGUSTUS gene 1 3396 . - . ID=g8733;Name=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS mRNA 1 3396 . - . ID=g8733.t1;Parent=g8733;Name=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 2910 3396 . - . ID=g8733.t1.exon1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 2910 3396 . - 0 ID=cds.g8733.t1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 2474 2656 . - . ID=g8733.t1.exon2;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 2474 2656 . - 2 ID=cds.g8733.t1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 2043 2321 . - . ID=g8733.t1.exon3;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 2043 2321 . - 2 ID=cds.g8733.t1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 989 1825 . - . ID=g8733.t1.exon4;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 989 1825 . - 2 ID=cds.g8733.t1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 465 730 . - . ID=g8733.t1.exon5;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 465 730 . - 2 ID=cds.g8733.t1;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS exon 1 289 . - . ID=g8733.t1.exon6;Parent=g8733.t1 NODE_3416_length_3518_cov_38.1966 AUGUSTUS CDS 1 289 . - 0 ID=cds.g8733.t1;Parent=g8733.t1 #PROT g8733.t1 g8733 MHHTNAHHTGEYKKDVLLEAAKRGDVDVIRQILTPLNVNCNAADGRQSTPLHLAAGFNRKAVVEHLLQNGADVHAKDKGGLVPLHNACSYGHYEVAELLVRYGASVNATDHWKYTPLHEAASKDRVEVCLLLMRNGADIALKNSDGKTPFDLAQDSLKEIFTEDNRRREAFEAVRLGDLARLKRVLGSGQTNFKDGDKGSTLLHVASLYPRRPIVEFLVKKGADIHSRDSDGFTPLHVAASTGHADVAECLLVAGASIDALGCWNTTPLHEAASAGRASVCRLLLRYRASMTAEDSDGRTPLDVAKDPAKAVLMSGEVPLDAAALPRNPSASSIFGSSNGGAAFGPAAGASGVAGSVCGPVAPFAQRAPLTSSGGVSSGIQQQPQQQQQQQQHQQHQQQQQQQPTPMIIDTPASVANTGNNNNNNNNNSNNSGVRGRGEVEKKEAERRMIECAKTGDVPTMLDVISAENVNCRDMNGRHSTPLHFAAGFNRLQYAEILLQHGGDVHAKDKGGLVPLHNACSYGHFEVAELLIKHGATVNATDHWKYTPLHEAASKGRVGICQLLLKHGADALLKNSDGKTALEVAEDEDVKDVLRGDAALLEAARNGNLAKIRKLLTDRNVNCQDPSGRNSTPLHLAAGYNQLEIAEYLLEHGANVDAVDKGGLIPLHNAASYGHAEIAALLIKHGASVNAADKWRFTPLHEASQKGRTQICSLLLAHGALPTLKNVEGKTPLDLAAAGDVKALLSDAMPKQLDAVLSAASAVSAGGPSVGAGGGVAGAA # PASA_UPDATE: g9501.t1, single gene model update, valid-1, status:[pasa:asmbl_4275,status:12], valid-1 NODE_2420_length_6347_cov_44.8701 . gene 2 2230 . + . ID=g9501;Name=g9501.t1 NODE_2420_length_6347_cov_44.8701 . mRNA 2 2230 . + . ID=g9501.t1;Parent=g9501;Name=g9501.t1 NODE_2420_length_6347_cov_44.8701 . exon 2 2230 . + . ID=g9501.t1.exon1;Parent=g9501.t1 NODE_2420_length_6347_cov_44.8701 . CDS 2 1837 . + 0 ID=cds.g9501.t1;Parent=g9501.t1;5_prime_partial=true NODE_2420_length_6347_cov_44.8701 . three_prime_UTR 1838 2230 . + . ID=g9501.t1.utr3p1;Parent=g9501.t1 #PROT g9501.t1 g9501 KILHKGGTEGISLVIPNAEQWNACIADVVRTKTLPTGKDLPNHVTTIFSEAKAGRVRFKTGTVLRDADAIADELMLLSDVARLCFLLEVDFDKYNIDLSLEHLPLITMDIAIFRNLGVDRPFYLVDTPGPNEACCGEFLERINQRVLDGSKGALLVAPQNQIGSNAMNDVLGNIADSKRKILVALNHVDGMSDRKKELPDVIKRLEGIMSEADCLFEIIPVAASRIKMMCELQAELHSGRAGFAESKIWTQVVEAMGINTEQLVDVKEYARKIIPQELETYNAVDLVKAIKGFYLDWEGFALQTRVDDLTYVRKALDKFVEQIKTSMKDKVAQDNELTKLRNAQENANGFRSQVRNLVLTLRLTLRNSFNVERENFIAVTKKLVQENVKIVNADNPTAKSMRFKSSVVMITWCTDNTVRIAKSTIAPRCNEFLDTVRKNTSGVVEFEWRKLQTLLKEVEHNIGQRLGLTNLSQPPTFTLRNPNYTVDPDNIDFSVFSEREKGGVVIKDTDTFVDVVSQNLIKTASLFANAAYARFEESLEAVLAKFQVRAEEYVRRVDDLIKCQTGLQNARGEHKLAELRAYEASASANYEQAKKLLVDLRAALGLPPDDK* # PASA_UPDATE: g9502.t1, single gene model update, valid-1, status:[pasa:asmbl_4274,status:12],[pasa:asmbl_4276,status:12], valid-1 NODE_2420_length_6347_cov_44.8701 . gene 2422 6347 . - . ID=g9502;Name=g9502.t1 NODE_2420_length_6347_cov_44.8701 . mRNA 2422 6347 . - . ID=g9502.t1;Parent=g9502;Name=g9502.t1 NODE_2420_length_6347_cov_44.8701 . exon 4915 6347 . - . ID=g9502.t1.exon1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 4915 6347 . - 0 ID=cds.g9502.t1;Parent=g9502.t1;5_prime_partial=true NODE_2420_length_6347_cov_44.8701 . exon 4650 4700 . - . ID=g9502.t1.exon2;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 4650 4700 . - 1 ID=cds.g9502.t1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . exon 4385 4519 . - . ID=g9502.t1.exon3;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 4385 4519 . - 1 ID=cds.g9502.t1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . exon 4062 4115 . - . ID=g9502.t1.exon4;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 4062 4115 . - 1 ID=cds.g9502.t1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . exon 3690 3824 . - . ID=g9502.t1.exon5;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 3690 3824 . - 1 ID=cds.g9502.t1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . exon 2422 3452 . - . ID=g9502.t1.exon6;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . CDS 2870 3452 . - 1 ID=cds.g9502.t1;Parent=g9502.t1 NODE_2420_length_6347_cov_44.8701 . three_prime_UTR 2422 2869 . - . ID=g9502.t1.utr3p1;Parent=g9502.t1 #PROT g9502.t1 g9502 VCEANGLPVSIGGVGVGEIASSVSLVGGASAIIDQFSQLAGDPNANDAPVRLCPPAPAPNDDETKSGRTPTPLPPDPRALKSSLGPSNGVVAAIVLASVLAPTLIGLVVMFLYKRRKLHKDDATSLGTTASNPYIEKILRDPRYGAVVGALKLAPPEGRFEIAVAMGECIDAVQSRELPRSAVTLEYVLGRGEFGVIYSAQLDYAVVDGERSADAGVARDTSRRQHNAAAAAKKSRFSRARAAKSSSVTTAATATSNSNNSNAGNSTSTGAASDAPLFRKRETGTASSSVSASTWSSNDSALVSDMTRPVRMPIVVGRGGSGAFSTVSSMATRTSDDSCADDGISTSPSMPRRQQGIMLSVDGVRGVGGVYANPDANPDGSSSSSSPPSPTSQIVHVAVKTVSEHATLDELRSILEEARLMAGLDHPHVLRLVGVCTSEPPLFIITELMECGDLRAFLRGRREAGRFLSPKELVGICSQVADAMDYLGRNKCVHRDLAARNILVAGDGATVKVADFGLSRALHDSDYYRKIGLAKMPIKWMAPEAINDRKFTPASDVWSFGVLCWEVFAHGATPYPLFTNAQTVEQVATGYRMQPTLNCPAEVHSLLMRCWDGDESNRPTFSAIYTALNTVMQYADKDPISPLGPGIHAHLPAANSFDSGGDQPFGMRGGLGSDRASDFGLVAGGMNSTHKYVWTDPALLNFAPLSSPGGSPPTASGGGLRATGDMELVVRPQRPHQGVFQLLASCPSSAATRQHGSEPSPNPHSNPTPTRNADEDAGSRHSSTGSVYLAEIEISV* # PASA_UPDATE: g3637.t1, single gene model update, valid-1, status:[pasa:asmbl_3584,status:12], valid-1 NODE_2129_length_7586_cov_40.0425 . gene 5546 6627 . + . ID=g3637;Name=g3637.t1 NODE_2129_length_7586_cov_40.0425 . mRNA 5546 6627 . + . ID=g3637.t1;Parent=g3637;Name=g3637.t1 NODE_2129_length_7586_cov_40.0425 . five_prime_UTR 5546 5590 . + . ID=g3637.t1.utr5p1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . exon 5546 5718 . + . ID=g3637.t1.exon1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . CDS 5591 5718 . + 0 ID=cds.g3637.t1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . exon 5821 5954 . + . ID=g3637.t1.exon2;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . CDS 5821 5954 . + 1 ID=cds.g3637.t1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . exon 6158 6307 . + . ID=g3637.t1.exon3;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . CDS 6158 6307 . + 2 ID=cds.g3637.t1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . exon 6509 6627 . + . ID=g3637.t1.exon4;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . CDS 6509 6570 . + 2 ID=cds.g3637.t1;Parent=g3637.t1 NODE_2129_length_7586_cov_40.0425 . three_prime_UTR 6571 6627 . + . ID=g3637.t1.utr3p1;Parent=g3637.t1 #PROT g3637.t1 g3637 MATAAVANITPETADGKTLEAPRYDPPPPFVPPEQRASHPQYRLTDEEFRERKVLLKRPNAQSPLGFNIRGGKENGMGIFISKITPGGLASDKGGLLVGDLVLEVNGMDCHDIEHAFAVTMLKSSSDISLRVRYAPYDYKMTFVSVRTEAAAAPPKH* # PASA_UPDATE: g3635.t1, single gene model update, valid-1, status:[pasa:asmbl_3581,status:12],[pasa:asmbl_3583,status:12], valid-1 NODE_2129_length_7586_cov_40.0425 . gene 167 2057 . + . ID=g3635;Name=g3635.t1 NODE_2129_length_7586_cov_40.0425 . mRNA 167 2057 . + . ID=g3635.t1;Parent=g3635;Name=g3635.t1 NODE_2129_length_7586_cov_40.0425 . five_prime_UTR 167 221 . + . ID=g3635.t1.utr5p1;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . exon 167 446 . + . ID=g3635.t1.exon1;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . CDS 222 446 . + 0 ID=cds.g3635.t1;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . exon 586 872 . + . ID=g3635.t1.exon2;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . CDS 586 872 . + 0 ID=cds.g3635.t1;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . exon 1017 2057 . + . ID=g3635.t1.exon3;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . CDS 1017 1614 . + 1 ID=cds.g3635.t1;Parent=g3635.t1 NODE_2129_length_7586_cov_40.0425 . three_prime_UTR 1615 2057 . + . ID=g3635.t1.utr3p1;Parent=g3635.t1 #PROT g3635.t1 g3635 MGVLSATQLANLKKHEYKCKGYSILDNYVMCHFWNWLVLYIPLWIAPNLITIVGLVINIATTLVLVWFSSNADKDAPEWAYLLCALGVFLYQTLDAIDGKQARRTKTSSPLGEMFDHGCDSVSIAFLVYGTGIALKLGPTMPLIVLCMLFMAAFFCAHWQTYVTGILEFGRIDVTEGQFLLMIIHIISAFAGADFWHRSPLGVDNMNIVLSLAVGGLFYMVLRICVTVLFRHQSATVAGTSVISPIFPVIILLGSANYIVSNSATDAHFSHCAAFVFAFGFAFSKVTNQLVVAQMTKSPFVLFDSVLIGPILLALNIKLGSLIDERVALYVCAAFTLFSLLQYSYLVCCEICDFLKISCFTIPRNSNMS* # PASA_UPDATE: g3638.t1, single gene model update, valid-1, status:[pasa:asmbl_3582,status:12], valid-1 NODE_2129_length_7586_cov_40.0425 . gene 6960 7564 . - . ID=g3638;Name=g3638.t1 NODE_2129_length_7586_cov_40.0425 . mRNA 6960 7564 . - . ID=g3638.t1;Parent=g3638;Name=g3638.t1 NODE_2129_length_7586_cov_40.0425 . five_prime_UTR 7562 7564 . - . ID=g3638.t1.utr5p1;Parent=g3638.t1 NODE_2129_length_7586_cov_40.0425 . exon 6960 7564 . - . ID=g3638.t1.exon1;Parent=g3638.t1 NODE_2129_length_7586_cov_40.0425 . CDS 7232 7561 . - 0 ID=cds.g3638.t1;Parent=g3638.t1 NODE_2129_length_7586_cov_40.0425 . three_prime_UTR 6960 7231 . - . ID=g3638.t1.utr3p1;Parent=g3638.t1 #PROT g3638.t1 g3638 MPLTVRMQKFSIGAVSWIMLSILLGVQLVLGYFLYFQHRRIKAMTKLLHSIETDGERTYCTTCGTRNCSSSGYCCYCGRRMVKRVLSSRMATTSNSYQAINCPPDSADN* # ORIGINAL: g3636.t1 original gene structure, not modified by PASA NODE_2129_length_7586_cov_40.0425 AUGUSTUS gene 2558 4750 . - . ID=g3636;Name=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS mRNA 2558 4750 . - . ID=g3636.t1;Parent=g3636;Name=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 4688 4750 . - . ID=g3636.t1.exon1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 4688 4750 . - 0 ID=cds.g3636.t1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 4375 4463 . - . ID=g3636.t1.exon2;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 4375 4463 . - 0 ID=cds.g3636.t1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 3714 3815 . - . ID=g3636.t1.exon3;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 3714 3815 . - 1 ID=cds.g3636.t1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 3308 3455 . - . ID=g3636.t1.exon4;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 3308 3455 . - 1 ID=cds.g3636.t1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 3045 3206 . - . ID=g3636.t1.exon5;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 3045 3206 . - 0 ID=cds.g3636.t1;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS exon 2558 2917 . - . ID=g3636.t1.exon6;Parent=g3636.t1 NODE_2129_length_7586_cov_40.0425 AUGUSTUS CDS 2558 2917 . - 0 ID=cds.g3636.t1;Parent=g3636.t1 #PROT g3636.t1 g3636 MQRRAGAGGATVFVPALFTALVGGVTFVTAIIVDYEQNGKFRAAAEGWMRRLWHEFKAVTTPARRAEPGISSDASLWEQLVRKYRSIPESTKTLAVLTLLNAAVFVAWQIPRIGNAMRPLFLHNPKSKNVLPMLLSTFSHLEIWHFGLNMMALWSFGSHLHDVLGAPYFTAFYITGGVFASLTSVLFKMSIGNTVSSLGASGAILALVAATAFAYPDSRIGVPLVPITVPADKGLMGIVALDLLGLVMRWSTFDHAAHLGGAAFGYLYMRYGHEWVRFDAYATVVEAWLEGKKAWASLVSGGRGGRA* # ORIGINAL: g12334.t1 original gene structure, not modified by PASA NODE_3974_length_2422_cov_79.925 AUGUSTUS gene 1079 2340 . + . ID=g12334;Name=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS mRNA 1079 2340 . + . ID=g12334.t1;Parent=g12334;Name=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS exon 1079 1287 . + . ID=g12334.t1.exon1;Parent=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS CDS 1079 1287 . + 0 ID=cds.g12334.t1;Parent=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS exon 1560 1806 . + . ID=g12334.t1.exon2;Parent=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS CDS 1560 1806 . + 1 ID=cds.g12334.t1;Parent=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS exon 2188 2340 . + . ID=g12334.t1.exon3;Parent=g12334.t1 NODE_3974_length_2422_cov_79.925 AUGUSTUS CDS 2188 2340 . + 0 ID=cds.g12334.t1;Parent=g12334.t1 #PROT g12334.t1 g12334 MADITTLSFINNTNNTAGYACSGRTRVCTIVPPNHFGKIPGVPVGSSWRYRMGVSEAGVHRPPVCGIHGRPNEGAFSIVLAGGYEDDVDNGDEFVYTGAGGRDLSGNKRLGDHCKEQALSRENLALARSCNTEVSESGAVAKNWKGGKPVRVVRTENLKKHNPKFAPARGCRYDGLYKVVKYWPESGASGFKVWKYLMRRDDD # PASA_UPDATE: g13001.t1, single gene model update, valid-1, status:[pasa:asmbl_6463,status:12], valid-1 NODE_3731_length_2877_cov_40.2166 . gene 219 2808 . - . ID=g13001;Name=g13001.t1 NODE_3731_length_2877_cov_40.2166 . mRNA 219 2808 . - . ID=g13001.t1;Parent=g13001;Name=g13001.t1 NODE_3731_length_2877_cov_40.2166 . five_prime_UTR 2805 2808 . - . ID=g13001.t1.utr5p1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 2574 2808 . - . ID=g13001.t1.exon1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 2574 2804 . - 0 ID=cds.g13001.t1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 2231 2389 . - . ID=g13001.t1.exon2;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 2231 2389 . - 0 ID=cds.g13001.t1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 1632 2072 . - . ID=g13001.t1.exon3;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 1632 2072 . - 0 ID=cds.g13001.t1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 1136 1451 . - . ID=g13001.t1.exon4;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 1136 1451 . - 0 ID=cds.g13001.t1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 476 968 . - . ID=g13001.t1.exon5;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 476 968 . - 2 ID=cds.g13001.t1;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . exon 219 309 . - . ID=g13001.t1.exon6;Parent=g13001.t1 NODE_3731_length_2877_cov_40.2166 . CDS 219 309 . - 1 ID=cds.g13001.t1;Parent=g13001.t1;3_prime_partial=true #PROT g13001.t1 g13001 METQKVKIILGPALDSVSLPLSKVCATQGVTQLSFGGFSEDFSDKTLYPLFNRIYRSDELEGIALAKYMAARGWSNVGIIESTAYPCPQAFKKYARDLGVRVAQSVTIPNTVERIDLKDYFSKLKAANVKVIYTLIQEDAQYNLYKNAYKYEMSGAHGVQWITGTLVGGTFPFANQWPIDGWCKERPYCTEAMIGMRFLLQQYGNPTGDPRWATMLGKFVQMDPLENEGEINFPTASVISYLGLSYDTVIMMATALTSMMNSNQTITGPSLNKVIRQTQIDGLTGGVKLDANGDRIGYASIVINVDSRFTLTTGNPSPYFVSNNYQITTYILMNDKDQPIVEVPLGPPQTHPNNTAKVVRTFASANPTTGDVSFPTDVTILSHNCSQGCGGGFRTDTRPYIPSENCAFYMAYTRVPVGILETITNLTLATFATSLQNGLGQQIAAKASARVSVIYAAAAAAQFASEFNTNLQSSLPAAASACYVLLNVTSNGTCTATPTDSRCSPSPTCYAAVPAPNVVSECGLDVTGVAAPTSISSTACQTKLHPRVSSDPLIAACGALLVNSASGGCQTYLQTTY # PASA_UPDATE: g2184.t1, single gene model update, valid-1, status:[pasa:asmbl_6927,status:12], valid-1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . gene 240 2164 . + . ID=g2184;Name=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . mRNA 240 2164 . + . ID=g2184.t1;Parent=g2184;Name=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 240 293 . + . ID=g2184.t1.exon1;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 240 293 . + 0 ID=cds.g2184.t1;Parent=g2184.t1;5_prime_partial=true NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 441 618 . + . ID=g2184.t1.exon2;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 441 618 . + 0 ID=cds.g2184.t1;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 1012 1140 . + . ID=g2184.t1.exon3;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 1012 1140 . + 2 ID=cds.g2184.t1;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 1383 1453 . + . ID=g2184.t1.exon4;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 1383 1453 . + 2 ID=cds.g2184.t1;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 1793 1903 . + . ID=g2184.t1.exon5;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 1793 1903 . + 0 ID=cds.g2184.t1;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . exon 2156 2164 . + . ID=g2184.t1.exon6;Parent=g2184.t1 NODE_4074_length_2238_cov_33.1817_potentialcontaminant . CDS 2156 2164 . + 0 ID=cds.g2184.t1;Parent=g2184.t1 #PROT g2184.t1 g2184 SRRMRQGGIKHNRLEPSKLPGGRNHYGTAPTLFDSNGLNSNNGSIGKKKAIRSSFPPIGSSMSVLTEAPAGVNVMRMGADGKPLSVLPPIKGAKSEMAMSHTDGQVGQAPQPLPLDTSAFVRMLLTGCDAREAVNRGDKQTGATPLHLAAGRNDVRTIEVLLSNKAHVNAMDNLQKTPLYEAF* # PASA_UPDATE: g11521.t1, single gene model update, valid-1, status:[pasa:asmbl_8806,status:12], valid-1 NODE_674_length_19224_cov_40.0025 . gene 2510 5478 . - . ID=g11521;Name=g11521.t1 NODE_674_length_19224_cov_40.0025 . mRNA 2510 5478 . - . ID=g11521.t1;Parent=g11521;Name=g11521.t1 NODE_674_length_19224_cov_40.0025 . exon 5392 5478 . - . ID=g11521.t1.exon1;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . CDS 5392 5478 . - 0 ID=cds.g11521.t1;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . exon 4918 5067 . - . ID=g11521.t1.exon2;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . CDS 4918 5067 . - 0 ID=cds.g11521.t1;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . exon 3602 4705 . - . ID=g11521.t1.exon3;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . CDS 3602 4705 . - 0 ID=cds.g11521.t1;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . exon 2510 3273 . - . ID=g11521.t1.exon4;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . CDS 2872 3273 . - 0 ID=cds.g11521.t1;Parent=g11521.t1 NODE_674_length_19224_cov_40.0025 . three_prime_UTR 2510 2871 . - . ID=g11521.t1.utr3p1;Parent=g11521.t1 #PROT g11521.t1 g11521 MWLPHGHAASAVSFALLMTAIAAAFGAEFDPFDDSIKFQIAYIPERGTRPDMPSYVTINTADNGAYTCHLPQLSDMSDEESMRIPPSLHPAVILEGLKEMCIYRIDSYWSYEYCHGQHLRQFHEAEKAPTPGGKSASYILGKAVTKLTAPPVSAEAPTNGKAEASGDNGPPSIPLLELDGKMLPYYSIMLTDGTMCDLTGAPRTTEMRFVCSVYASPQFVSIAETSTCTYAAIISTPTLCRNRLYVVKDEPASTIRCYSNNPSGETFRSIVPERPTPEEALRRQQQLFALPADAGEEEKPPAKGRPGMAPIPPSAQQQQQQQQQQQQAALQAKQREDAAKQQQQTLQQQEQLAAQQRARQQQQQQPPPQRQTLGGAGKATGLYDSGHPQQQGQPAGAGTGADKAQVEVNAQSHQTALPTAVKLKIPKMSPAEMKALINAFTSNCFQGVFAGGYWQFEFCYGRSVRQYHGVGQLQKEFYLGRWDERAHRQWFDALTPAQKALHYTSMQTTLHYSNGQKCDETGLARAVDVRLVCGHLDKPTAVTVSIEESEMCKYKLTVVSAAICHLIEDVDPYKVPHLRP* # ORIGINAL: g11526.t1 original gene structure, not modified by PASA NODE_674_length_19224_cov_40.0025 AUGUSTUS gene 17292 19065 . + . ID=g11526;Name=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS mRNA 17292 19065 . + . ID=g11526.t1;Parent=g11526;Name=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 17292 17387 . + . ID=g11526.t1.exon1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 17292 17387 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 17602 17685 . + . ID=g11526.t1.exon2;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 17602 17685 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 17914 17970 . + . ID=g11526.t1.exon3;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 17914 17970 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 18246 18308 . + . ID=g11526.t1.exon4;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 18246 18308 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 18543 18653 . + . ID=g11526.t1.exon5;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 18543 18653 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 18985 19065 . + . ID=g11526.t1.exon6;Parent=g11526.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 18985 19065 . + 0 ID=cds.g11526.t1;Parent=g11526.t1 #PROT g11526.t1 g11526 MAVQELRGCVDLLQESWRVLGKPVEQQTAILEPLIVALQNVIQSDAVLISKLRIRIADENARVSQLCALLGETRDPQLPQNMGLIQLESDLSETKGKLEKLASEREGFLAEKRAKLDAIHGELGHPTGVDLWRQQEGRLSREAIQAYDDAIDNALVLKVQKEP* # PASA_UPDATE: g11523.t1, single gene model update, valid-1, status:[pasa:asmbl_8807,status:3], valid-1 NODE_674_length_19224_cov_40.0025 . gene 6667 10620 . - . ID=g11523;Name=g11523.t1 NODE_674_length_19224_cov_40.0025 . mRNA 6667 10620 . - . ID=g11523.t1;Parent=g11523;Name=g11523.t1 NODE_674_length_19224_cov_40.0025 . five_prime_UTR 10456 10620 . - . ID=g11523.t1.utr5p1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . exon 8577 10620 . - . ID=g11523.t1.exon1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . CDS 8577 10455 . - 0 ID=cds.g11523.t1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . exon 8042 8165 . - . ID=g11523.t1.exon2;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . CDS 8042 8165 . - 2 ID=cds.g11523.t1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . exon 7778 7841 . - . ID=g11523.t1.exon3;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . CDS 7778 7841 . - 1 ID=cds.g11523.t1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . exon 6667 7545 . - . ID=g11523.t1.exon4;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . CDS 7240 7545 . - 0 ID=cds.g11523.t1;Parent=g11523.t1 NODE_674_length_19224_cov_40.0025 . three_prime_UTR 6667 7239 . - . ID=g11523.t1.utr3p1;Parent=g11523.t1 #PROT g11523.t1 g11523 MALSQTSLLLHAHFWTLRSKPGGASVPAPGGLAQRLAGVGIGASSTRTVPLGIHSYREKAKRGLKLSGSASSLNFDDDAPYAAQYADWAERRSETVVPSNEAPKSALGGQKLRDALRSCEDVLSSGRPISLRWNGGQNMCSLLVDDGTSISFATARHSSDVERMLVDTTLTSKLDGRIYDSITFDRIMIASFANKSQLSLVQLFPKRSAADPRKLSRLSSKDPRMHLHDITDTATTGAGYGGSRLAVSSRHEFVVAWWPEMADHRSFNIAILRVATEHKLAQSSGSASPWAAPPSGEKLAFNVSKSGVSSANPPASAVSYSLVPACQMGVDGTIVDLQFSATHPRILFVVALLGDGITLAHSVFECVEPDIVAFGDASSRHVPPSSVVEPKLRLERSSECMIGLPSSPLTIARSNTEDRLAVLTADGTLIMYDDQSASVVARQSTDMRKPAVLRWHTGDEVLLACSREDGEVRFFDRVANSLHVCLSSEYPQPMMSLRIADYLSHATRLEVAEWSRDPMSTPGSGDGADFGAMWAAGVRKAYCHDTVMLVFDRGPIVVLRIELGMLSRGCLGASEIVAERIRHHEWAPAVALVTDVGWGRSAEGSFLCLFTVLDAMLSAPYTPDIEALILKALDAFWTPRSGAAQVAVNKYSHSLVSLYRLAFSYMIRNRKLDRAFFIATRLAACDLFMEVYVHAVVAKEFTLAAVALEQAKTTTVHIELPSPPPVPSDDSEEERARAEDGTTKGDHDALLFESAASGGSNRPPPIVPLRPVATHVAQGGERLFAVNGTA* # PASA_UPDATE: g11525.t1, single gene model update, valid-1, status:[pasa:asmbl_8808,status:3], valid-1 NODE_674_length_19224_cov_40.0025 . gene 13787 16459 . - . ID=g11525;Name=g11525.t1 NODE_674_length_19224_cov_40.0025 . mRNA 13787 16459 . - . ID=g11525.t1;Parent=g11525;Name=g11525.t1 NODE_674_length_19224_cov_40.0025 . five_prime_UTR 16321 16459 . - . ID=g11525.t1.utr5p1;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . exon 15538 16459 . - . ID=g11525.t1.exon1;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . CDS 15538 16320 . - 0 ID=cds.g11525.t1;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . exon 14781 15273 . - . ID=g11525.t1.exon2;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . CDS 14781 15273 . - 0 ID=cds.g11525.t1;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . exon 13787 14602 . - . ID=g11525.t1.exon3;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . CDS 14001 14602 . - 2 ID=cds.g11525.t1;Parent=g11525.t1 NODE_674_length_19224_cov_40.0025 . three_prime_UTR 13787 14000 . - . ID=g11525.t1.utr3p1;Parent=g11525.t1 #PROT g11525.t1 g11525 MAMPRRMCRRLLSRFIIVVGLFAFGTSVWLSFGLRFGAHTGNPSGAEDGKALDAQSAILRRQATLQKALREKLWLLASKEREEEALRARLAAMNNDDPTEEGADSGDHKDHIDERADADLADLLARPGERLGVDAMPKRRDSPNMNEGGEDLDEYMKAMLNGGNEAVRVADKSEDVVMRQKEMDADAEVREIARANAGSGNAGAPEGELRIEQFYDGTVHIPMEVGVDRSAVHVQPGIPIAVTPTVSGAYLFPILTYGANNQLRGLFESIVMARRLNRTLVVPDLFNTYGEDVVDGKVVKNVVQHAEEAGKDSYAVYSLSDLYDTDSIRRIIPTATIGEYIANCSGTIDSVVMMRSLQSTYNHKNLRWRFNHYAMRVRRIVGASRAKLPYADVNVFDFSRYRGERCLALGLPYHSFAIEQMPEYQDTECIMQPSPRIIALADAFIERHRAKTRARFRMPYRKDGSILSVHLRRGARWTSTYCREFYSANHTACYPPIDDVVEQIRAALDGPGDHEFVYLSTASRNKTEMAKIASAFGNRVVRIHQNTESDPLIRDLTTAELSVLEQTICMRANAFIGTAFSTWSATVDRWRRCNAMAPASLFNVLPSALTSPPPALVNRTNGTLA* # PASA_UPDATE: g11524.t1, single gene model update, valid-1, status:[pasa:asmbl_8809,status:3], valid-1 NODE_674_length_19224_cov_40.0025 . gene 11117 13711 . + . ID=g11524;Name=g11524.t1 NODE_674_length_19224_cov_40.0025 . mRNA 11117 13711 . + . ID=g11524.t1;Parent=g11524;Name=g11524.t1 NODE_674_length_19224_cov_40.0025 . five_prime_UTR 11117 11371 . + . ID=g11524.t1.utr5p1;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . exon 11117 11737 . + . ID=g11524.t1.exon1;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . CDS 11372 11737 . + 0 ID=cds.g11524.t1;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . exon 11901 12182 . + . ID=g11524.t1.exon2;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . CDS 11901 12182 . + 0 ID=cds.g11524.t1;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . exon 12510 13711 . + . ID=g11524.t1.exon3;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . CDS 12510 13379 . + 0 ID=cds.g11524.t1;Parent=g11524.t1 NODE_674_length_19224_cov_40.0025 . three_prime_UTR 13380 13711 . + . ID=g11524.t1.utr3p1;Parent=g11524.t1 #PROT g11524.t1 g11524 MNFTLSTSAAAGRRGSIECAFVAAQLPSSNRNIPRISHPNEDDDGEPDTTSVHSPSGSHSALHDPRTRVGMLRGGDTPERKQSGNASPTFKRLDSAKIWKSISNFKMNSGADIEEVLPSESEVRRQTVHMPNALNLFSESIAIDLQRVDSKGLNLPSLRARQQQYMVMRDLDTVEEFSDLDHFISENANTMAMESPTPFWIDVQKPTRKDLVLFEQVFGLHPLTTEDILTESPREKAEFYENYMFLGLEYLTQQPQTDDLAINDLQENGRMIYLVIFENCVLSFHYDDCRYLDRVVRRMKRLKKNRTPDFVMYTLLDEIIDEFGASVKFAEAEVERLDDDVMVAGGAVHRIILGKIGLYRRSLGSMNRYLQPKRDIIVGMTTREMDVLQSNTQLYLRDVLDHVLSMLIALDGSREAINVAQANYFAKVSLDINRVMKALNLSATIVLPLTLITGIFGMNVQVPGQLGEFNTLWPFFIILSLMSMMALGMICYFRHQKYTGPKADV* # ORIGINAL: g11522.t1 original gene structure, not modified by PASA NODE_674_length_19224_cov_40.0025 AUGUSTUS gene 6007 7000 . + . ID=g11522;Name=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS mRNA 6007 7000 . + . ID=g11522.t1;Parent=g11522;Name=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 6007 6266 . + . ID=g11522.t1.exon1;Parent=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 6007 6266 . + 0 ID=cds.g11522.t1;Parent=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 6447 6529 . + . ID=g11522.t1.exon2;Parent=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 6447 6529 . + 1 ID=cds.g11522.t1;Parent=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 6828 7000 . + . ID=g11522.t1.exon3;Parent=g11522.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 6828 7000 . + 2 ID=cds.g11522.t1;Parent=g11522.t1 #PROT g11522.t1 g11522 MDAQAELGDGDAASGGAKPTAASAKGPATRPKKTQPTKSIGHNREAFLRINFLFQAAHLALRSNNEELARFYVKTLREVTRRLVLRLDPSIKRAICKECCSLLVPGISSTVRIRGGREGHMVVTCNHCKSVRRYETDSAHTLWSERTAAGESSAPPEPIPSASSEGTGEPV* # ORIGINAL: g11520.t1 original gene structure, not modified by PASA NODE_674_length_19224_cov_40.0025 AUGUSTUS gene 136 1940 . + . ID=g11520;Name=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS mRNA 136 1940 . + . ID=g11520.t1;Parent=g11520;Name=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 136 651 . + . ID=g11520.t1.exon1;Parent=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 136 651 . + 0 ID=cds.g11520.t1;Parent=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 951 1370 . + . ID=g11520.t1.exon2;Parent=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 951 1370 . + 0 ID=cds.g11520.t1;Parent=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS exon 1530 1940 . + . ID=g11520.t1.exon3;Parent=g11520.t1 NODE_674_length_19224_cov_40.0025 AUGUSTUS CDS 1530 1940 . + 0 ID=cds.g11520.t1;Parent=g11520.t1 #PROT g11520.t1 g11520 VAIVSAFLRNAVRAATSRPSSQVSYYSQDGDDDTGIALPIDVAESLALAPSLHPHSRLPPPPPPPPCDHVPFLDGSSTVFASAVASSSKYADRISPMISASQAVSFPVSARTGVMGVGLGYGPSLEEKRHMLEYLALKTKEDAERRSRDSAPNIAMAKSADGRVGHIQSIWEVGPSSQAQQQPVSHQRQGLVHVQTVQTHTQMLQRSLQPAPTQQQQQQQQQQQQQKQQQQQKQQQQQKQQQQQQQQQQQQQQQQQQQQQQQPQQQQQRQGAPVQSKIGNPSTLAKSSGAQTSANTAARGVGRGIGVELDTKAKPWHPIYSAPKPENDLTELPPPPPDFLEGEAASTASKSVGKKNPSSPSSTATVPTAASLPTAASLPTASSPSSAAGVSGLAPPSREPSTPSTWPAPVVRRLSQPGTQTLQSSGRGGATGGAVAYIAPFSVQAATQ* # ORIGINAL: g4487.t1 original gene structure, not modified by PASA NODE_4869_length_1182_cov_31.7019 AUGUSTUS gene 99 728 . - . ID=g4487;Name=g4487.t1 NODE_4869_length_1182_cov_31.7019 AUGUSTUS mRNA 99 728 . - . ID=g4487.t1;Parent=g4487;Name=g4487.t1 NODE_4869_length_1182_cov_31.7019 AUGUSTUS exon 499 728 . - . ID=g4487.t1.exon1;Parent=g4487.t1 NODE_4869_length_1182_cov_31.7019 AUGUSTUS CDS 499 728 . - 0 ID=cds.g4487.t1;Parent=g4487.t1 NODE_4869_length_1182_cov_31.7019 AUGUSTUS exon 99 218 . - . ID=g4487.t1.exon2;Parent=g4487.t1 NODE_4869_length_1182_cov_31.7019 AUGUSTUS CDS 99 218 . - 1 ID=cds.g4487.t1;Parent=g4487.t1 #PROT g4487.t1 g4487 MLLEYVCGGELFSHLRRAGRFGNDMTRFYAAEIVMAIEYMHTQDIIYRDLKPENLLLDTNGHIKITDFGFAKKVEDRTWTLCGTPEYLAPEIIQSKGHGKAVDWWALGILIFEMLA # ORIGINAL: g5455.t1 original gene structure, not modified by PASA NODE_1925_length_8502_cov_41.9617 AUGUSTUS gene 1 8414 . - . ID=g5455;Name=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS mRNA 1 8414 . - . ID=g5455.t1;Parent=g5455;Name=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS exon 8316 8414 . - . ID=g5455.t1.exon1;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS CDS 8316 8414 . - 0 ID=cds.g5455.t1;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS exon 7956 8135 . - . ID=g5455.t1.exon2;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS CDS 7956 8135 . - 0 ID=cds.g5455.t1;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS exon 4854 7691 . - . ID=g5455.t1.exon3;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS CDS 4854 7691 . - 0 ID=cds.g5455.t1;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS exon 3085 4770 . - . ID=g5455.t1.exon4;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS CDS 3085 4770 . - 0 ID=cds.g5455.t1;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS exon 1 2885 . - . ID=g5455.t1.exon5;Parent=g5455.t1 NODE_1925_length_8502_cov_41.9617 AUGUSTUS CDS 1 2885 . - 0 ID=cds.g5455.t1;Parent=g5455.t1 #PROT g5455.t1 g5455 LFNLVNLIESFVLEPLESKSLIVSFLPETSYQQDTTPVERYSPDETYKSFEISGKIFLTASTLGPPGSTTVATPLEGATPVEPERPAEDEQQHLVLRFRSTVCRSVLRLDPSEQELNFDDCVLGGLYVKDVTVFNRSEIPLSFSVNYTASGEGDHVLDFSDYDTGYASQQYDVPGFGQVRIRIAYRPQDVGEFDLNVQFENVRDASNSEAIAIHAVVSAVQRVETISVSSGGTIDFGDCYTGETVVRRLTLRNLTESPVDVDFRQGRPVEITVHVSSDVADGAAGADAAESSMGGGFGGAMTSPSAMASAPGAAMLRRTGVAPPESRVGEGGGSMQIDQFTLPAGRERTLVVRYSPVRAPGLPDEKAAKLTRQSLRLHLRCFDTDGREIERRLVQLRAHVCTSIIRLEKSEVNFGEINVGSVKTGTFRVVNESDLPAHARLMVQSKILTAMTQEVVIPPRQSWDARVDMCPRKVNPDYRKQLTVANLRNRDNDLILVVRSNNMDQNGATFHSMFYVLQTSSARNFINFDTLVYSDPKMRTFSVKNVSGGPLCLDLSASSDQLTMYVRSDATMSQRVSVTSRTPYGDDTVMQAAAAAQHAASAEMREKLIESMEERNRAKEQHVTPQGGLSGAAAATSGAAAAASGGGASGGDAPMAGYLDLATAKSRSRPITRHNSLDVFALLPQGGAARGRDKPAHPGHTHAGGKDAKDGGAFASDADATALSRAVLKRSVIVEDSASSSPGSPLMSSNLSNDAFAPVGSSSNALHMTAMTASGSHGLLGHVPSGLSSNSNTSIVGNLSSHTASPSPTFSGQDAASPLDGCVGASGASPGTATVGGGVGSVSLASAGAPPPMSLEELARSFEDFSSVPNFTDPGLEEEYIRAHQRRRRELERAIAERRIVPVSRLQLAPESRTTVYVVFTAAAGPIARTRGGGKMRNREEKIHLKLMEQRRASGEDVDGRDGPTVFPLREILVRAKVCRSVIEVGQKNINFGKLKTTEFRAKSLLLTNASEVPMLYKLRKTGSISSSDLHINEGRMGVDPDNSLVIHLKARVNKPPTFYLKSLTLDFGPVVADETTGAHNISLTNTGSKRRSYEIVAKFPATTVGDRVASYVPEFSFELDSSMDGVRLSKESEEAIEQLEQKIKIAERKGQSDKAEKIRDKLAKLRSGELDGGESAYTSEASDEESNETVRPTALARRVKRSANSIVFSVDPYRVQRVLVRIRPSIPEGSTRLPSVGPREAINGILAVHAHRDVDHVKCIAYTAVVCPDYETYLDAMADVGPGDGVPSDAVALAERGANASPGPHAHLSHHTGFRMRPGRDAGFSTSSERPSPYTGMGAPAGASTPRSPGAAAIEAAEKRPNSPMRPDMSSRIRSAIKNTVVRGFGLSPFAHPRKGAPDAPAVMPVTASPKKSEENLRFALLPADLNLGDVFVSEDVPASFEIRNTRTQPMNFVLMEQNPAQQQQGSSSSNPSISAGGQTVASSASGSLSPDAAPTAVTQSRLAKSLRFEGETSGQIGPRETLKVHFRAKFGAPGKHRREVVVRDLGTRQEEVLVVTANARRPKYLRFPDLEGGHDRAEGEVGDIVLGACYIVPGQRFAKVLPVRVENVSRGPIFLACKSNLAKQVYVMCDERLEVPAEDVRVAAGECAVVRICLQPHLPEDSLAAGECRELIGGIRFEAYDGSRAALEPAQAAASQPTLLVEATVKFSATVGQSVLKLSDSILKLGSTTIVGERFSGTFAVRNLSTLLPTQYRIHPPPSMTVSQRAGSLRGRDAVVAKDGTYDASSVVDRECEHIVQFECLSEHFGLYNERIRVENLENPTQDLDIIVRFFVDEDCLHTDLPRGETVIRVLDFGDIYLSPCGNGRWSVGFQSIENPRGLNIRSSPVWPSRTFRLHNTLSTPMRLRAKTDLDLSVHWVHLRPDGSMIPAVNRKTTVSGSSETLEDLQLEAYDDDGDFEGVAEGAGSILPAPSLDDSLTSTEEIRVCGGEFVIPGKGSIGVCVAFPAPIRMSARKWRSLNEGKRVNYFGMLLFERLGSGALNPAAMRFPALSPGARPMAFDFRVGEVVKVVDLACMYCLSLGAVSPSSIDLGKVGYFNSWRRVRFDFNVENKSEVPLLYRFGDAMHKALAVYQGEKGQSPIDPLVYFALEPLQSKPFRGELDPLWMDRLASGRQEITLDLVNVNNSSDKISLTVSAQLTVFELRFDRLLDASTVGLPPLQFPVREGQAQACEEWFTVENKGPSEELVKFLISVEVDPAVSPYITLDVLSRSSNRHLSEISLGQGETMDVRVRGALVPSMRPPEHLCGLGASSITLGRISFRSVHPDVDEELPSETIVVRGSIEAGPIFALSAAAIKLFVKAAAPLPPPEANPQLQQQQIQDGEKAEDEGGLLSAEHSLGRLDSADAELEALSAYVPPGSLMGPSPVPSPAVSSSAQLAVPGTSDAHTFRVVNLSQAIPFRFQVSLRRADKHAPGQPSSVVSAGVTAVSSSVIMSQASSLSLLSSVPQSPMLSIASTPLVFGSEKGSAYPTVPQSPLTPPPFATGSNMFDEALRVAQQQQQQQ # ORIGINAL: g4923.t1 original gene structure, not modified by PASA NODE_2810_length_5076_cov_36.0086 AUGUSTUS gene 274 3876 . + . ID=g4923;Name=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS mRNA 274 3876 . + . ID=g4923.t1;Parent=g4923;Name=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 274 482 . + . ID=g4923.t1.exon1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 274 482 . + 1 ID=cds.g4923.t1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 772 1515 . + . ID=g4923.t1.exon2;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 772 1515 . + 2 ID=cds.g4923.t1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 1819 2352 . + . ID=g4923.t1.exon3;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 1819 2352 . + 2 ID=cds.g4923.t1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 2611 2827 . + . ID=g4923.t1.exon4;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 2611 2827 . + 2 ID=cds.g4923.t1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 3040 3140 . + . ID=g4923.t1.exon5;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 3040 3140 . + 1 ID=cds.g4923.t1;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS exon 3857 3876 . + . ID=g4923.t1.exon6;Parent=g4923.t1 NODE_2810_length_5076_cov_36.0086 AUGUSTUS CDS 3857 3876 . + 2 ID=cds.g4923.t1;Parent=g4923.t1 #PROT g4923.t1 g4923 GMVDNGVAILSADNVAMTSFSGLRDAVIGGAIIAVRNLVMCPYIVDLSLRRANTSIPTTFQDNAPAGVCACEAYLPPRNKPLGCKEISNNVVLGPTGDDTNDPFASVTLIRGDLIIAGSNRTNISSDVFPALTAVLGSIVVVNNTLLTRIQFTGLATLQGVLVASNNDALAVVYISSIPYDIAQQALVNGYRPSSYYTPPTSTATIKAMSAVRLIRNPNLKSLQLHGIQKLTNNVIESPDVVAASNGVNAALALIDVGTIPSLSGLVDFRSIVGGINGDVILRNNTPCLADSLQWAQIATGNVSMIEPPSTVQCSTLQCDSKCDESLGCFSTGLEFCFSTSAVAESTSSDNTASLELGVGVGVGVGLLLLLIAGFTARRVIRKKKLRKAVPTPGLAYSMNDEVDLKPLVALEFPRFRVQLREQLGRGEFGVVYLGAATGIVRGEGVTLVAVKTVRADASREERMAFVREAALMATFVHPNLVRMLGVVSVDEPVWVLAEYMRNGDLRSYLKRHRFNSFGDSSLVTSGTGGGTDSFSEADSKGIPAAAEPSVSDARKHISNQRLVAIAIDIANAMEFLAARHIVHRDVAARNCLVGEDSVVKRDARRC* # PASA_UPDATE: g2538.t1, single gene model update, valid-1, status:[pasa:asmbl_6800,status:12],[pasa:asmbl_6801,status:12], valid-1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . gene 12056 13764 . + . ID=g2538;Name=g2538.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . mRNA 12056 13764 . + . ID=g2538.t1;Parent=g2538;Name=g2538.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . five_prime_UTR 12056 12067 . + . ID=g2538.t1.utr5p1;Parent=g2538.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . exon 12056 13764 . + . ID=g2538.t1.exon1;Parent=g2538.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . CDS 12068 13696 . + 0 ID=cds.g2538.t1;Parent=g2538.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant . three_prime_UTR 13697 13764 . + . ID=g2538.t1.utr3p1;Parent=g2538.t1 #PROT g2538.t1 g2538 MRMSDVVGFNSLPPEVVVNQIVPYLANVDVSALSKVNSALRAHLRHKRVFHLWPLYNNKYIEDATFRDEVKATIPVGRIALCQSPCMRDFSACAGVYSVDALPLGNDSPPDLSPLQGVHTVHLRNLWAGDRTRVNLSPLADAHTFSLTRCLHLVGGASLTNVQSIALDRSRLDVIHLPNASHVSFRDMTLNSTDLSSLRRARVVSLAFCSDAVDLAPIANAEEVTITKCPDIPVSSYALLGRVRKLVLHRLLLTAIPVEFAGVHTLDLTESFDLVDVAAGSRVHTLILHRCVGVVDASKLGAVHTLDLSESGIVDVSCLGNVHTLRLDGRHGLIGLSALKSVHTLSLRQCDVADVRVFGSVHALNLTFNRKVVDVSMLGDVHTLVLERVPVDDASALSNCVVLSLRRTRVFDVSMLGRIRSLDLGYTPVCDASALGRVHTLNLEGTKVTNVSMLGSVHSLNLSRTEVTDVSSLGGVHTLCLELCQKLADVSALGTVYSLDLSDCKNLSDVSCLARVCVLRMSNVVGALGMSVLAGSVRHLIL* # ORIGINAL: g2535.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 7634 9212 . - . ID=g2535;Name=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 7634 9212 . - . ID=g2535.t1;Parent=g2535;Name=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 9184 9212 . - . ID=g2535.t1.exon1;Parent=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 9184 9212 . - 0 ID=cds.g2535.t1;Parent=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 8027 8569 . - . ID=g2535.t1.exon2;Parent=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 8027 8569 . - 1 ID=cds.g2535.t1;Parent=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 7634 7910 . - . ID=g2535.t1.exon3;Parent=g2535.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 7634 7910 . - 1 ID=cds.g2535.t1;Parent=g2535.t1 #PROT g2535.t1 g2535 MRPPRKPNPNAQLAKCAQEFKQINTAAGEAATTEGALLWKKTLLGAILNTARAAIADFYGEVADLNEKSALLGIDRPRRTKLRGDVLSVYNAFLASVKLSNSDESHNSILARAFAPRSSENFPLDEDLRHTRLGLGKAIEVASAILAVCGNAPAGVSQITAFIETVKLILRGHIPPATSDFKDAVTRLLNEAAGISRPTSHASRNPESRAVAIGNGDGEDGDGKGVAKRAVKSAGKGVSKELAVEESEESEESEESEESKSAVDGQESAKDGQDGSEDRADA* # ORIGINAL: g2534.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 4594 7057 . - . ID=g2534;Name=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 4594 7057 . - . ID=g2534.t1;Parent=g2534;Name=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 6920 7057 . - . ID=g2534.t1.exon1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 6920 7057 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 6669 6758 . - . ID=g2534.t1.exon2;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 6669 6758 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 6547 6575 . - . ID=g2534.t1.exon3;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 6547 6575 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 6376 6446 . - . ID=g2534.t1.exon4;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 6376 6446 . - 1 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 6146 6270 . - . ID=g2534.t1.exon5;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 6146 6270 . - 2 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 5978 6061 . - . ID=g2534.t1.exon6;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 5978 6061 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 5765 5867 . - . ID=g2534.t1.exon7;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 5765 5867 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 5596 5673 . - . ID=g2534.t1.exon8;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 5596 5673 . - 2 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 5220 5476 . - . ID=g2534.t1.exon9;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 5220 5476 . - 2 ID=cds.g2534.t1;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 4594 5124 . - . ID=g2534.t1.exon10;Parent=g2534.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 4594 5124 . - 0 ID=cds.g2534.t1;Parent=g2534.t1 #PROT g2534.t1 g2534 MRLVAKVQGIKNSAKHHSDRKSLARYIALSVHPRFKHGIPKSLRSSAASVVPKPPLLSELACILLEGCRKTLGGAHDIAIMQQLYRCFFLMFGVDLKDPATWENGLLYAGCNIDTGFPKRNTGTLGLAQFINSLQYLMAACLPASQFQLEQSEVFWQHARSEDGMAFLLQRHMTFYEPKAHLPVATEGASTFTFSHADFNAMRFDKLKMRLPPLPQMVLPLSPDVDDNGKELWRVRFLEGSHLEGVIRSHMDALYETGSSATGQVQMGAFDHYGTGGPFATARNSLLQKKKGAGGLSNRERQLLHDLEGYDWEEEGGKAVKLSVKVGEVLFFRSELEHEFSQNNQVKVPLRRRVPRLAAYDQVSLVCPSDFGVGQMADKAYDRTTKGPFTTSSPQTLQETVDVLMSGSAPVHFSHQGRGDKIPQRDANLSLPSSIPQHQQPLSWLGYASGGICTCAHRSTAAFDAPRSAWDCPAVREQLGILLRAACGRMPEDPEELAQLR* # ORIGINAL: g2537.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 10221 11129 . + . ID=g2537;Name=g2537.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 10221 11129 . + . ID=g2537.t1;Parent=g2537;Name=g2537.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 10221 10351 . + . ID=g2537.t1.exon1;Parent=g2537.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 10221 10351 . + 0 ID=cds.g2537.t1;Parent=g2537.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 10532 11129 . + . ID=g2537.t1.exon2;Parent=g2537.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 10532 11129 . + 1 ID=cds.g2537.t1;Parent=g2537.t1 #PROT g2537.t1 g2537 MFAMVTRFVFADVATSSTFLRLEMSTPSTFLGGSTLVRMTMKKGIRSAAGLCRVHTLTLCNAYLFEDASDLSSIHTLTLADCVAFADASKLPKGGVHMLDLSRCPLVDVSAIGNIKVHTLVLEDCKLVTRGISALRGVHNLDLSGVKLCDVRIDALGTVHTLNLSRTDVCDVSGLGGVRNLNPSSCRRAEVVTMRGSVYELNLHGTGVADVRALGSVHNLALNRTSHIAFSQMISTWLSKRK* # ORIGINAL: g2540.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 22613 24130 . + . ID=g2540;Name=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 22613 24130 . + . ID=g2540.t1;Parent=g2540;Name=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 22613 23018 . + . ID=g2540.t1.exon1;Parent=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 22613 23018 . + 0 ID=cds.g2540.t1;Parent=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 23252 23576 . + . ID=g2540.t1.exon2;Parent=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 23252 23576 . + 2 ID=cds.g2540.t1;Parent=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 23653 24130 . + . ID=g2540.t1.exon3;Parent=g2540.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 23653 24130 . + 1 ID=cds.g2540.t1;Parent=g2540.t1 #PROT g2540.t1 g2540 MAPQRSKAHSRASKSLFASTVQSYLRLRNHHDVAADALFDTIIAQRIGNLEEALCDCACKVTSQRDQLYRPLLELFSQRILGLKTRKGIVALASAFQTAVCRRVPEFLDDLLEIPAFQMLDLQAAYECGLKALSSALLYYSSRKDIEKLCAQLQTMHAHYEEMRPEASEYLQWTVELYEALITSSTHACNEIVMRVVVRELIKWAMIHIVHRIEFSDPGRLGILIEEGVLTVQEALDVYDAQKRPPYVTERPEGFVEKVVQIPILENTSVADWRWTTRLFGTVKAIDEDDPDQIATSELFCETGEVYDRDEVEKSILMDAIGKYRPASGEEFGLSYMTIDHVHACIQFKTIRPGFAAHVLNVHNDKLEEYLAYIWRLEHYANVLKQRLTTIPATNALACLNF* # ORIGINAL: g2536.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 9750 10127 . + . ID=g2536;Name=g2536.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 9750 10127 . + . ID=g2536.t1;Parent=g2536;Name=g2536.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 9750 10127 . + . ID=g2536.t1.exon1;Parent=g2536.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 9750 10127 . + 0 ID=cds.g2536.t1;Parent=g2536.t1 #PROT g2536.t1 g2536 MICNCERSDLRSIHMPIKQRIDCTPLSEVHTILAHRLVPLPGRPLSAEGVSIRSVVDESILPMLANVPSLDLGRQANNVTRLRPPRIVLRNCHIEDVSSLVDDAELVHLIKCLRVRLSSPRFGGL* # ORIGINAL: g2533.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 1915 2549 . + . ID=g2533;Name=g2533.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 1915 2549 . + . ID=g2533.t1;Parent=g2533;Name=g2533.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 1915 2104 . + . ID=g2533.t1.exon1;Parent=g2533.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 1915 2104 . + 0 ID=cds.g2533.t1;Parent=g2533.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 2191 2549 . + . ID=g2533.t1.exon2;Parent=g2533.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 2191 2549 . + 2 ID=cds.g2533.t1;Parent=g2533.t1 #PROT g2533.t1 g2533 MEPTDDDVYDFQNDLEAGLMEVIRKLFTETFDAKSYMLNCALAVKPEGAVAKLWIELGDLSGYRGHDGEDEDSDINPILDCDVQNVDDLANHHPDDEGECEDQGDSNRSVDGEADEKQGDSEDPGNARADCGSDGDGDGHYYPVGKNSRVKNGRSQKKLKRRNGETADDDSDDDRRPAKRAN* # ORIGINAL: g2539.t1 original gene structure, not modified by PASA NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS gene 14099 18929 . - . ID=g2539;Name=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS mRNA 14099 18929 . - . ID=g2539.t1;Parent=g2539;Name=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 16217 18929 . - . ID=g2539.t1.exon1;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 16217 18929 . - 0 ID=cds.g2539.t1;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 15508 15793 . - . ID=g2539.t1.exon2;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 15508 15793 . - 2 ID=cds.g2539.t1;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 14949 15375 . - . ID=g2539.t1.exon3;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 14949 15375 . - 1 ID=cds.g2539.t1;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 14592 14841 . - . ID=g2539.t1.exon4;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 14592 14841 . - 0 ID=cds.g2539.t1;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS exon 14099 14148 . - . ID=g2539.t1.exon5;Parent=g2539.t1 NODE_398_length_24789_cov_23.1317_potentialcontaminant AUGUSTUS CDS 14099 14148 . - 2 ID=cds.g2539.t1;Parent=g2539.t1 #PROT g2539.t1 g2539 MRTNVLFAWALAVAILVATTAATPRCMAPSGKPVAWWLLFKVDRGIDWFYVDNTMDDIATFASLDISDVRNRTVSPLALTILAITRADGPVDYLAYSDQYASNVPKGSILGGTRRQIPVPFDDDWVAPLRTHGILAYDGSSGAFILHSDEYFPPVTADARLIDPAGDDWNWIDSVGMRQRQYGCFSVGAPNADPFAVLDVDAALSFLLRANPIVAASSLAVGSPKFVESLKPAAGNEVFVELAMPLYMFQRCLGKELDDPLASNCFHAKSTPPTPALKIPRLSGLAGGDIGFTNTPLHLLVRNRATSLEFCLLSDSRTSLILVPARSPRRMFSSPTFLTALVGATVPTNLVCLGNLFTAAKDVTAAAVCFENLAVANMMRIALCYFEINCGLAIPDDMTFVDLAEVRRGIPPPWKPAPLIPLGHSPAQDFRAWMNLRAYYARLHSLTRYAPYFGLVGAPPKPSDAEENGLPQSGIDSEYEGDINKYLDGCQSEIDAWRDPTASLGSLDAVAKDWRLAAGLMPKVEEAPIDFDEIDASIQRELVSEYARMWSTRFFKDGKGTKGSIDPEWFVDKMVQKHGAAWYDPRTLETVPDYVAQLEQEWGEMMGESSTYKEFMGTYKDRLSGVIRKLRKRNASTSEPKLRKPRAELEEDGWPSNAARNYLVNCTSVFYDQPEDDTSAFLKMGGKKFLGGQFRWRRDSRLNFRVELWNGSSVLTTFEIKANNLIVSIDARVYEPTFTLIESSLPPYQKSLLMLKNLPKEYGDYAVLTWAQPRTRMELHAFAWNYEPPKEGEADDGIGYCEWGPCLYHIIRTTEAGEVEVFRRYVSAEKARTIVRKYYSCQEPDSCHMALVTDVDVCSGEDVEDAIVEDDEEDEGSNSNAAKARQSTRDTDDADDEILRRNKRDLANVPTDTRFYFSRYFYGTGGSWEGTTAARGRDCDTSRVASPLFTAYTIVVPDGPEKLPRPSSRFRVQMGIGQNLCVRKLPDTQFSPWGIVPTAIGHLAPSGAFSYGDGGTFMTASAMDATFAYVNIAPQASSCNQNWWRVLERRIVEMVNLSGPFSGVPGPAQYRLLPQRGYRGAYAVSGVSFTGSTARSCLLPDDTGRAPPEMRGNIIPSHFWTAVCIPEFKYPVTREGTLRTSPAPLSFLVYIGNDNAGCSKGTSRGGIVFLGHKEDHTFSIDVGHSTDLTDAGRDSAGTKTADVLGMLFSNGISSTSFFNGGCADEKGYMSFQTHPWKQQRS* # PASA_UPDATE: g5097.t1, single gene model update, valid-1, status:[pasa:asmbl_7348,status:12], valid-1 NODE_4476_length_1564_cov_27.4553 . gene 1 1247 . - . ID=g5097;Name=g5097.t1 NODE_4476_length_1564_cov_27.4553 . mRNA 1 1247 . - . ID=g5097.t1;Parent=g5097;Name=g5097.t1 NODE_4476_length_1564_cov_27.4553 . five_prime_UTR 1212 1247 . - . ID=g5097.t1.utr5p1;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . exon 1122 1247 . - . ID=g5097.t1.exon1;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . CDS 1122 1211 . - 0 ID=cds.g5097.t1;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . exon 803 914 . - . ID=g5097.t1.exon2;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . CDS 803 914 . - 0 ID=cds.g5097.t1;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . exon 1 142 . - . ID=g5097.t1.exon3;Parent=g5097.t1 NODE_4476_length_1564_cov_27.4553 . CDS 1 142 . - 2 ID=cds.g5097.t1;Parent=g5097.t1;3_prime_partial=true #PROT g5097.t1 g5097 MKLFEVGGHPKSTRYLFLGDYVDRGYFSIECVLYLWALKINYPKTLFLLRGNHECRHLTEYFTFKLECKHKYSEKIYDECMDSFDCLPLAALMNGQFLCVHGGLSPEVNTLDDI # ORIGINAL: g7762.t1 original gene structure, not modified by PASA NODE_514_length_21984_cov_40.8737 AUGUSTUS gene 16249 17409 . + . ID=g7762;Name=g7762.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS mRNA 16249 17409 . + . ID=g7762.t1;Parent=g7762;Name=g7762.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 16249 17409 . + . ID=g7762.t1.exon1;Parent=g7762.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 16249 17409 . + 0 ID=cds.g7762.t1;Parent=g7762.t1 #PROT g7762.t1 g7762 MAPALRILSLNLHGWKLDGRFGSLRGSETERQRAKFDAIAAAVAAENVSVIAVQEACTPPLGSVAEKSASNSLCATAIDILAQALRTHTGDAWDAHWISAHRAWTGEPDECEEGLGFLLRGGCGVRGVPKEIEYSVQGAFRRVSMGVTLDISLGASGGARTTQSHTVYIYCVHFEYFGRHPRLMQARQAAVEALVDVGASRDTALIIGDYNDGPTSKTCEVLAQSGFVDASSPLGDIDRCFINRSSPCAVASVRHIFDGKDHPVVSDHNGLLLTLSLPSPMPSPSTGAMPRGSPWDQQTIRIVAECDVGFGNSLFVRGSPAPLEWDRGWPLVNRGANVWVIVLCAAGASPGTRHEFKLLINDSRWQTGDNCVAVVGGATRVQPVFG* # ORIGINAL: g7763.t1 original gene structure, not modified by PASA NODE_514_length_21984_cov_40.8737 AUGUSTUS gene 17967 21260 . - . ID=g7763;Name=g7763.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS mRNA 17967 21260 . - . ID=g7763.t1;Parent=g7763;Name=g7763.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 20474 21260 . - . ID=g7763.t1.exon1;Parent=g7763.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 20474 21260 . - 0 ID=cds.g7763.t1;Parent=g7763.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 17967 20308 . - . ID=g7763.t1.exon2;Parent=g7763.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 17967 20308 . - 2 ID=cds.g7763.t1;Parent=g7763.t1 #PROT g7763.t1 g7763 MEHLSHLQQLNNFAAQIAHYRCGDYERKWKSLVSSEFAWEKGELERIVDARDSRSSLACAYRRVVVTLVSLHHLSLTSESDKSSGPGALQSESSLLEEPDYGYGAENERFEYNLMRICRDDVDGNGVADPAWIFVTSSVSKGAIYGYHLLNGEFTEVASAWTYFAPKFGSRGTIAYSLGCILGYLYRWQTLSNLDAIDPGLMSVISSDPRNSNPSADARGNFVWQINDGGKSGQHLGVNETQKRAIDSLFDPIEIIHGPPGTGKSTTICEALLRRTHPRSRALICTTTNKAIDSIADKLSRLGHGGQLLAVGSQSRLGPSTTPFLLSNQVAADSTVRIAAKVRASLSIALSACDNVDVGEGSGLVSPDSPLAERLCLLVASLTTLSADLVEAGVDTTSSTTSAVKAVHLPTPSAGAAKDNADAAWTDTWDDPPDAHSHDARLSGGDSGGVRSDNANEDSLSISELVKTVSRVHCTRVHGMLASVLTSLSCAMTGPAWFLAPSLQMQLHTSMWTICGIVDAWECLVQSAAAMLLWERARFIVCTCSTAVRLSDRLQRDLRAIGLRGANAAITVDTVVLDECGAMLEGDAVGTLAHGARALLLVGDHFQLPPLSKWRCDEYTVSLLERLVAVRSARGGVAGAAHSGSGSLVHFLDVQYRMPPDQCRIVSDIFYGGQLTTAPEKEADFLVADGRNSYDRTVKFVDVAGREQATTDATFANIGEVDAVVSEVSRLIDGSASGRASDPSSLCVLTFYRGQARAVSAALRVRGGKFADVLVATVDAMQGREADHVIVSCVRTESVGFLRDARRINVAISRARQSLCIVGASSCLKQSPHWRRVLGFLAPSWRFYRDDKPKRRPGNVVEASSVSPSTADTTALGNYAHRPQAIPHADPRRSGGLAYSVATNAAAGNSQVVASAGAGGSAAAARMQPPRQANSSTGSTDINRERIVATPKSASSIVAVNALTAADFPSLSSSRTTPAARPIPTVQPHPVAHTAPAMGRGMGTGTTAYQTQSREQPQQSARSVQPQVKPKFVALTKGSRKL* # PASA_UPDATE: g7760.t1, single gene model update, valid-1, status:[pasa:asmbl_7894,status:12],[pasa:asmbl_7895,status:12], valid-1 NODE_514_length_21984_cov_40.8737 . gene 724 6132 . - . ID=g7760;Name=g7760.t1 NODE_514_length_21984_cov_40.8737 . mRNA 724 6132 . - . ID=g7760.t1;Parent=g7760;Name=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 5263 6132 . - . ID=g7760.t1.exon1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 5263 6132 . - 0 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 4974 5094 . - . ID=g7760.t1.exon2;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 4974 5094 . - 0 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 4669 4791 . - . ID=g7760.t1.exon3;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 4669 4791 . - 2 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 4417 4468 . - . ID=g7760.t1.exon4;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 4417 4468 . - 2 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 3835 4203 . - . ID=g7760.t1.exon5;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 3835 4203 . - 1 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 3093 3442 . - . ID=g7760.t1.exon6;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 3093 3442 . - 1 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . exon 724 2755 . - . ID=g7760.t1.exon7;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . CDS 765 2755 . - 2 ID=cds.g7760.t1;Parent=g7760.t1 NODE_514_length_21984_cov_40.8737 . three_prime_UTR 724 764 . - . ID=g7760.t1.utr3p1;Parent=g7760.t1 #PROT g7760.t1 g7760 MATVADGDTPTGVTPASDYRDEPAVGNTTVSTKELSSDKALMSSTSGDAPALASDSPTRHTVMYRRTRVRSAPLHPNGSLFRVDADVSEDEARRNLATVAEGHPNDTVAVASSRDEKARSNPDGAETSSKTESNATDAVRPSIAEKLSSASSVATPAKDEVPVSAGNKDVAGSAAGDTAASQSQSTGPSAETTKAEASTSATEKPDGVTGASVDVRNGPSTSTGDTPPRPRLARRPSALKLLQLAQLRLAPHAERLSTSFLKRISPPRKFCEPRSATRIRWNLAGFCFTIYCAVTVPFRSAFGVNTIPLMIIDLVCDLFFLCDIYLNFHTGVMQEGILVMNKDKCVEGYLKKWFSIDLLSMLPLDDILRLAGIDVTFWDRFARILRMSRFGSYLAAYEMKSSVPALVRLTKLLLLMFLLIHWTACIYFCLALRVGLGEDDFVPPARFIDASAFSQYVHCLYFSTSALTGSGNVNAPVNDLEISFSLCCMVVGFLMFATIVGNIGEVLADMHRIMSQFRQKMDLLQQYMKHRGIPREIQERIRVHYDYLADRKQVIDERTILDDLPMYLRREIAVFLNYETLMKVGIFKDCEPGFINSLALKLKAEVFSPDEYIIRKNEIGSEMFFISKGQVEVVDETGKTIFATLGEGTYFGEVALLLQERRTASVRAKTFCDLFSLNKADFDEVLEDYPLAAEKMLIEAQRRISMLKNSKSVRLRKRWNDAINLVIALNKFQKVRPKMAEAAKTAAAAAAAAASGSASALLGADDGAKALPQRRMGRMRSSTISSPSQLNKPFVTTPPVFGGASLSTTYPGTAAGSGPSQQPLTIAMPTPSVSAPATPTITPGTLFIRHSDDAPEEGAKRGTPPSRRRSMSVNAPPAMLAGMPPLRRQISSIFNAVSEEGGDEPASPRGGGSGSGPGTPQLSRPLSVAANSSAGRDSPVGMRKRSTSLSSMANAVALAKAPIVPVAGGVAGAPGILALTEAGAVVVPVLPVQTAVQQVLDNDLPSPLLRKTLMKSNSATLGRKRGQSVSSQQGPGILRRRPSMEEDLGEPAAGSPLLKRTNSLRGSQIIRSRQSSGTNLLEGAIPVAVVAPTPVVAPVAASSFRIRGNRARSSSLVGIDISKLQSQGARSQASLARMGSGLALVPLPGGAGIGAVALPQSPGKYPVRRNSKSFLPDVSAIKPQTGSSTEEELVSDMSSDEDEGGVTAQNKATKDEDGGKEVRSGTSTPTGGTQSNRGSQSSLRILTPRDDGSDAAVAMDLRNDAVLAATKLATEDAVQSVSASEGDAETS* # ORIGINAL: g7761.t1 original gene structure, not modified by PASA NODE_514_length_21984_cov_40.8737 AUGUSTUS gene 8178 15654 . + . ID=g7761;Name=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS mRNA 8178 15654 . + . ID=g7761.t1;Parent=g7761;Name=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 8178 8373 . + . ID=g7761.t1.exon1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 8178 8373 . + 0 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 8504 8595 . + . ID=g7761.t1.exon2;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 8504 8595 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 8872 9192 . + . ID=g7761.t1.exon3;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 8872 9192 . + 0 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 9576 11673 . + . ID=g7761.t1.exon4;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 9576 11673 . + 0 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 11942 12361 . + . ID=g7761.t1.exon5;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 11942 12361 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 12587 13263 . + . ID=g7761.t1.exon6;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 12587 13263 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 13486 13816 . + . ID=g7761.t1.exon7;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 13486 13816 . + 0 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 14058 14248 . + . ID=g7761.t1.exon8;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 14058 14248 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 14433 14544 . + . ID=g7761.t1.exon9;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 14433 14544 . + 0 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 14807 14923 . + . ID=g7761.t1.exon10;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 14807 14923 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 15097 15177 . + . ID=g7761.t1.exon11;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 15097 15177 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS exon 15392 15654 . + . ID=g7761.t1.exon12;Parent=g7761.t1 NODE_514_length_21984_cov_40.8737 AUGUSTUS CDS 15392 15654 . + 2 ID=cds.g7761.t1;Parent=g7761.t1 #PROT g7761.t1 g7761 MATEMHSTLQGRIKGLYEKFMQNNARMSESALSLDTMVDCLVVLVDECKNVKGRKDKHISEFVEKYKDIIADVKRLRMNRNDFEVVKIIGRGAFGDVQVVRHKTTTEIFAMKTLKKAEMLAQEETAFFREERDIMAAADSRWITTAQFAFQDEQNLYLVMNYHPGGDLLSLLARHDDIFEEDMARFYLAETVLAVRSLHELGWVHRDIKPDNLLIDRNGHVKLADFGSSARLGPNGLVYSKMAVGTPDYIAPEVLKSTDGDGKYGVECDWWSVGVVAFEMLYGLTPFYSESLVGTYGKIMAHAKSLKFDPDAGVSDVAVSLMRGLLSGREDRLGFDGIREHPFFAGIKWDDIHAQKPPYLPIIRSLDDTSHFDDFDPQAVEPRQIPGGHVPRIGTGGDGLSGQQLPFVGFTFTRAVETSASVYAEVVGGRAASGGGVDGVKAANAAAADAVIALRAASLEKHLAERTRELEEQTLAFQRASGEATSLQKRLTDAIAARGKTEDALAAAERDLAGVQAELRDHERRLSSEKDARAACEDRLAKALAQVEDAQGHVRRLEADGEAERQRQQQVVLQLQADLSQRAQAQASGGDSAVLTAALEEAAAAARKLAEIRLELDSEKERRRISDDALVAFEAAVDEDRRALEGARKASEEREAAKDSRIAILERERDLAAVELRQMERRLRDESEAKADAEHAAAGSKAAATSADARAASLQASLDQLRAEMDRIASDLTAAKATVADLAAEKKHLVETTSQQELVIAALQEQIVEEASRSLASATLTALASPAHVRMPSITETIVSNDGDTTSIASSSTTDHLAMGMGLLSVGGSAGNLLDQRRRSQQVGNADWRETRDRKVQQQKERQLEHDLEQERHAKNELKSEVARVQGKLETLTIDVDAARDEAAMWKQKCATLLAGGDIDNEKQRRRVSVHNSFRKIMGRRQSQSEKRPPVIPQSPSSPSPSIAESQSSVSSSSTPTQASHPSSSTTSEGQNMSHSSAAVLDPTKRLAHSIPHRFGSYFVMRASKCSVCQASVGLGKHTKCSDCGMVCHTRCVSSAPATCGLPADFYSRMQELGGGRGGMGSKGALLAGSTGDMPFLVQHAHASAGPSVDQKSSSTPNIAGASSSSSLPLSSGGDGWVKVPDPRGVRYGWVKQWAVLSGHMLEFYEAHPEGPAHGAELSPYAPSKRMSASVVPVRSLDAAHPRFSIQSTVSANQLLRAAQSDLPYVFGLNDGSGGELFVLAPSMDAKERWVMRLEAAVSSSRAATSEKEFDTFPVLHLPTDDDSVRVTANAVVVFGESLLIGAREGLFAVPLDAVVPVSGSALNASGGSTGSGVLSSSTASGILALARSAMLKRVVEGLTRVHDMSVVAKCKVVVIHSDRTVFTVPVGDIDKPAAHPTIVEGSQSCHLFTATDDGLVALALQTSVVLCAFDHNVGTYIQTASISLASTPTCLAFTSFGVLCGSNNFAIIATTDGAACAKDLLDPSDDSLGFIAYGAKAGHSVPMAAFEVDGEVLLCFSDIGVFVDRNGRRSRPGEITWGIAPLFFALHAGYLWVLSSDTVHVRKVTERSLSFANTLAAVASPTHRELCPVRQVFGCRDGEYLGMSHATGDIYLCVEESSIVRFGRTVQHTSV* # PASA_UPDATE: g3849.t1, single gene model update, valid-1, status:[pasa:asmbl_1067,status:12], valid-1 NODE_1280_length_12435_cov_40.4681 . gene 170 739 . + . ID=g3849;Name=g3849.t1 NODE_1280_length_12435_cov_40.4681 . mRNA 170 739 . + . ID=g3849.t1;Parent=g3849;Name=g3849.t1 NODE_1280_length_12435_cov_40.4681 . exon 170 330 . + . ID=g3849.t1.exon1;Parent=g3849.t1 NODE_1280_length_12435_cov_40.4681 . CDS 170 330 . + 0 ID=cds.g3849.t1;Parent=g3849.t1;5_prime_partial=true NODE_1280_length_12435_cov_40.4681 . exon 548 739 . + . ID=g3849.t1.exon2;Parent=g3849.t1 NODE_1280_length_12435_cov_40.4681 . CDS 548 686 . + 1 ID=cds.g3849.t1;Parent=g3849.t1 NODE_1280_length_12435_cov_40.4681 . three_prime_UTR 687 739 . + . ID=g3849.t1.utr3p1;Parent=g3849.t1 #PROT g3849.t1 g3849 VLTHISIFLVEVAVDGAFVYAKRSNRQGMRNKKLISDFEGRSDDRVELEDFKRRTRINFGRLSGSIVCGSIGAAVGTLVKPGTGTFIGALIGDTLLYLF* # PASA_UPDATE: g3850.t1, single gene model update, valid-1, status:[pasa:asmbl_1066,status:3], valid-1 NODE_1280_length_12435_cov_40.4681 . gene 788 10653 . - . ID=g3850;Name=g3850.t1 NODE_1280_length_12435_cov_40.4681 . mRNA 788 10653 . - . ID=g3850.t1;Parent=g3850;Name=g3850.t1 NODE_1280_length_12435_cov_40.4681 . five_prime_UTR 10586 10653 . - . ID=g3850.t1.utr5p1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . five_prime_UTR 10371 10426 . - . ID=g3850.t1.utr5p2;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 10586 10653 . - . ID=g3850.t1.exon1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 10334 10426 . - . ID=g3850.t1.exon2;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 10334 10370 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 9923 9987 . - . ID=g3850.t1.exon3;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 9923 9987 . - 2 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 9007 9402 . - . ID=g3850.t1.exon4;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 9007 9402 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 8543 8619 . - . ID=g3850.t1.exon5;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 8543 8619 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 8113 8188 . - . ID=g3850.t1.exon6;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 8113 8188 . - 1 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 7566 7715 . - . ID=g3850.t1.exon7;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 7566 7715 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 7146 7256 . - . ID=g3850.t1.exon8;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 7146 7256 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 6715 6813 . - . ID=g3850.t1.exon9;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 6715 6813 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 5977 6163 . - . ID=g3850.t1.exon10;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 5977 6163 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 5743 5792 . - . ID=g3850.t1.exon11;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 5743 5792 . - 2 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 5334 5411 . - . ID=g3850.t1.exon12;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 5334 5411 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 4898 5014 . - . ID=g3850.t1.exon13;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 4898 5014 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 4418 4702 . - . ID=g3850.t1.exon14;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 4418 4702 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 4196 4267 . - . ID=g3850.t1.exon15;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 4196 4267 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 3849 3987 . - . ID=g3850.t1.exon16;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 3849 3987 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 3514 3596 . - . ID=g3850.t1.exon17;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 3514 3596 . - 2 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 3269 3376 . - . ID=g3850.t1.exon18;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 3269 3376 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 2873 3007 . - . ID=g3850.t1.exon19;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 2873 3007 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 2531 2633 . - . ID=g3850.t1.exon20;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 2531 2633 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 2237 2384 . - . ID=g3850.t1.exon21;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 2237 2384 . - 2 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 1697 1838 . - . ID=g3850.t1.exon22;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 1697 1838 . - 1 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . exon 788 1408 . - . ID=g3850.t1.exon23;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . CDS 1376 1408 . - 0 ID=cds.g3850.t1;Parent=g3850.t1 NODE_1280_length_12435_cov_40.4681 . three_prime_UTR 788 1375 . - . ID=g3850.t1.utr3p1;Parent=g3850.t1 #PROT g3850.t1 g3850 MDLASVLAQSVNAGDTAVQAQVMLFLKSAEEENFPSYITALAEIASHAQQQAAIRLAAALAIKNSLRMSGDVMSYGRRSWMQLAPEQRDHIKNALLNGLSTESSAISQIAQAMAEIATIELPFKEWPGLMPKLVEIVAMPTTNENVGLKTKALQLIGYICEAMADLGSDVLEAQSAPILSAVIQGMVESEQNNSVRSAAITALIDSLDFVGAHFRKKEERDYIMTRVCNVCTSNGSDDVKVKGFHALARTVELYYEFMKDYMEALFSLTIHGMRSKNEDIVKASIEFWSTICEVEHGIAMENASADGRSPPDRITMNYAYAAVQHVVPILLENLTVQTEHDEEDDFTVNKAAGTCLSLFAAGLLEKEQIALFTATVVPFVTKNIASEHWQYRDAAVYAFGVMLESQDPSFDNLVREALPHIIERTADPSVVVRDSAAWTLGKICETNPGVVFESPGALGNIVMRLHGCLSQEPRVASNAAWAILNLSESAYDLAEDEMDHNADYPHTFHLSQCYEVLVAELFKTADRPDGDESSLLLGAYEALSQLFTNCPEDCYPTILAATTQTITKLGILITKEKNAVSDDERLNCEQVESHVCGCLQSLLRRLKKADIESLSGHLMQVVIVLFENRGNGVQDDALGVVSALINAIEEGFAPHVNLFKPYLMHCLGMRQAFHICGSAVGVVGDICRAIGVAVLPYCDDFMGTLLEILKDPKVHRTVKPLVFSAFGDIAMAIGPEFRRYLQVVFDPLSQVAGLKIDNYDNFENVEYIDQLRQACCGAYTGILQGFRDSESNVQLAPQVNSIINFVKIVFLDLKEYVPKTYQEKIYNNETFIAAFAVLGDLCTCFGMNVRSLFIAPQTLIWVKQMMALASQSKEKSVKVQVKYVDKQFKAINLPLK* # PASA_UPDATE: g12337.t1, single gene model update, valid-1, status:[pasa:asmbl_315,status:12], valid-1 NODE_1082_length_14098_cov_43.423 . gene 157 557 . + . ID=g12337;Name=g12337.t1 NODE_1082_length_14098_cov_43.423 . mRNA 157 557 . + . ID=g12337.t1;Parent=g12337;Name=g12337.t1 NODE_1082_length_14098_cov_43.423 . exon 157 557 . + . ID=g12337.t1.exon1;Parent=g12337.t1 NODE_1082_length_14098_cov_43.423 . CDS 157 480 . + 0 ID=cds.g12337.t1;Parent=g12337.t1;5_prime_partial=true NODE_1082_length_14098_cov_43.423 . three_prime_UTR 481 557 . + . ID=g12337.t1.utr3p1;Parent=g12337.t1 #PROT g12337.t1 g12337 TFITDADFATFVRNMMSVLASVKPQPPQIVYVTMPATADMSTVPTKGEVRMARLNKVAVIVRKMAPSALIFDAFAMTITRALDRYYDRLHFFPDPSRGQKNRRPLSD* # PASA_UPDATE: g12338.t1, single gene model update, valid-1, status:[pasa:asmbl_317,status:3], valid-1 NODE_1082_length_14098_cov_43.423 . gene 608 3790 . - . ID=g12338;Name=g12338.t1 NODE_1082_length_14098_cov_43.423 . mRNA 608 3790 . - . ID=g12338.t1;Parent=g12338;Name=g12338.t1 NODE_1082_length_14098_cov_43.423 . five_prime_UTR 3728 3790 . - . ID=g12338.t1.utr5p1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 3414 3790 . - . ID=g12338.t1.exon1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 3414 3727 . - 0 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 2994 3148 . - . ID=g12338.t1.exon2;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 2994 3148 . - 1 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 2632 2827 . - . ID=g12338.t1.exon3;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 2632 2827 . - 2 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 2219 2405 . - . ID=g12338.t1.exon4;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 2219 2405 . - 1 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 1921 2031 . - . ID=g12338.t1.exon5;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 1921 2031 . - 0 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 1523 1692 . - . ID=g12338.t1.exon6;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 1523 1692 . - 0 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 1176 1255 . - . ID=g12338.t1.exon7;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 1176 1255 . - 1 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . exon 608 928 . - . ID=g12338.t1.exon8;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . CDS 720 928 . - 2 ID=cds.g12338.t1;Parent=g12338.t1 NODE_1082_length_14098_cov_43.423 . three_prime_UTR 608 719 . - . ID=g12338.t1.utr3p1;Parent=g12338.t1 #PROT g12338.t1 g12338 MHARPGAIHCHKDFFCGCNTDIIASQIMLLLISTLIYSSCSPSANREVRLGKTSATSNSPRTHISRKPVIFVKPITSTSTSMACPYGAGAPTGCPFDGTPLPEVEPKIGADGQRAPSGVYYGDYLQLNKLLSSQVMESEKAGNAVHDEHLFIIIHQVYELWFKQMLHELDSVRQLFSSDCIEERLMLRIVSRLRRVIEIQKVLVAQVDILETMTPLDFMDFRTYLTPASGFQSCQFRMIENKIGLKQENRTKYQQQHYCEYFNQDDLTNLRKSESEVSLLQLVEKWLERTPGLETEGFDFWDKYVRSVTEMLSENLDASLKHCTGDAQKLDIINEHERSRAVFESIFDPAKHADLVEKGERRLSHKALQGALMIALYRDEPLFQIPFSMLTALMDIDSLLTKWRYQHVMMVQRMIGNKMGTGGSSGYQYLRSTISDRYKVFIDLFNLSTFLIPRERIPKLDTTIERRLSYFNA* # PASA_UPDATE: g12339.t1, single gene model update, valid-1, status:[pasa:asmbl_316,status:12], valid-1 NODE_1082_length_14098_cov_43.423 . gene 4190 5161 . + . ID=g12339;Name=g12339.t1 NODE_1082_length_14098_cov_43.423 . mRNA 4190 5161 . + . ID=g12339.t1;Parent=g12339;Name=g12339.t1 NODE_1082_length_14098_cov_43.423 . exon 4190 5161 . + . ID=g12339.t1.exon1;Parent=g12339.t1 NODE_1082_length_14098_cov_43.423 . CDS 4190 5002 . + 0 ID=cds.g12339.t1;Parent=g12339.t1 NODE_1082_length_14098_cov_43.423 . three_prime_UTR 5003 5161 . + . ID=g12339.t1.utr3p1;Parent=g12339.t1 #PROT g12339.t1 g12339 MENRPPQNGPRRPRPLRVKVISIGDAGTGKSCIIKRYCEKRFVPRYISTIGIDFGVTKVSVKDKELKVNFFDMAGLAFFMDVRNEFYKDTQGVILAYDVSQKETFEHLDAWIAEMTRETGDLAKSNISVMVCANKVDQKNRSVTEQEGRAWATAHGFAYFETSANTGLGISEMFDAMFCDIVAINETGTAINTKKPTYTAEQVEAIQKIKSSRDDYDRLGVKRNATVDEINRNYRKLAVLLHPDKNSAPGSEEAFKALVTARATLLKDKS* # PASA_UPDATE: g12340.t1, single gene model update, valid-1, status:[pasa:asmbl_318,status:3], valid-1 NODE_1082_length_14098_cov_43.423 . gene 5200 8414 . - . ID=g12340;Name=g12340.t1 NODE_1082_length_14098_cov_43.423 . mRNA 5200 8414 . - . ID=g12340.t1;Parent=g12340;Name=g12340.t1 NODE_1082_length_14098_cov_43.423 . five_prime_UTR 8235 8414 . - . ID=g12340.t1.utr5p1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 8141 8414 . - . ID=g12340.t1.exon1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 8141 8234 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 7815 7906 . - . ID=g12340.t1.exon2;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 7815 7906 . - 2 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 7559 7707 . - . ID=g12340.t1.exon3;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 7559 7707 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 7291 7405 . - . ID=g12340.t1.exon4;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 7291 7405 . - 1 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 6959 7108 . - . ID=g12340.t1.exon5;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 6959 7108 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 6766 6832 . - . ID=g12340.t1.exon6;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 6766 6832 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 6488 6606 . - . ID=g12340.t1.exon7;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 6488 6606 . - 2 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 6263 6379 . - . ID=g12340.t1.exon8;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 6263 6379 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 6037 6121 . - . ID=g12340.t1.exon9;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 6037 6121 . - 0 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 5694 5765 . - . ID=g12340.t1.exon10;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 5694 5765 . - 2 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . exon 5200 5417 . - . ID=g12340.t1.exon11;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . CDS 5299 5417 . - 2 ID=cds.g12340.t1;Parent=g12340.t1 NODE_1082_length_14098_cov_43.423 . three_prime_UTR 5200 5298 . - . ID=g12340.t1.utr3p1;Parent=g12340.t1 #PROT g12340.t1 g12340 MADDNERRQKALSDYRKKLLEHKEFEAKVKAMREKLKDFNKDYEKSEDDLKALQSVGQIIGEVLRQLDDERFIVKASSGPRYVVGCRRQVNKSKLKASTRVALDMTTLTIMRALPREVDPLVYNMSHEDPGNIAYGDVGGLGEQLRELREVIELPLLNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASNIDANFLKVVSSAIVDKYIGESARLIREMFGYAKDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDVLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRLDILKIHAAPITKQGDIDFEAVVKLSDGFNGADLRNVCTEAGMCAIRAERDYVVDEDFMKAVRKVADAKKLEGKLDYQKL* # ORIGINAL: g12342.t1 original gene structure, not modified by PASA NODE_1082_length_14098_cov_43.423 AUGUSTUS gene 12699 13599 . - . ID=g12342;Name=g12342.t1 NODE_1082_length_14098_cov_43.423 AUGUSTUS mRNA 12699 13599 . - . ID=g12342.t1;Parent=g12342;Name=g12342.t1 NODE_1082_length_14098_cov_43.423 AUGUSTUS exon 12936 13599 . - . ID=g12342.t1.exon1;Parent=g12342.t1 NODE_1082_length_14098_cov_43.423 AUGUSTUS CDS 12936 13599 . - 0 ID=cds.g12342.t1;Parent=g12342.t1 NODE_1082_length_14098_cov_43.423 AUGUSTUS exon 12699 12817 . - . ID=g12342.t1.exon2;Parent=g12342.t1 NODE_1082_length_14098_cov_43.423 AUGUSTUS CDS 12699 12817 . - 2 ID=cds.g12342.t1;Parent=g12342.t1 #PROT g12342.t1 g12342 MDIPLCDRDDVLSTLTDWGRDLLREWRGAIQEHRTEILDQRKSPIACAVGVPGSGKTRILCEFPGALKSMVKEVEQIMGTPYRAHSLWVNLGGPTSVAHWELTAPKHAVAVRLLFAAFSFSPRISFAEFQNSIPQTWNISIETALGAVHRALQRVSSDQHRTLFFLGVDEFTMLLDSKNKDNEAYRRPLKAVISGLSRCALNPGGPFCMLPMIAGTSSVQLHLKEVPAQSSLIGRAPPIFGGCSAGYKAGDSGESRAIHA* # PASA_UPDATE: g12341.t1, single gene model update, valid-1, status:[pasa:asmbl_319,status:3], valid-1 NODE_1082_length_14098_cov_43.423 . gene 8842 10705 . + . ID=g12341;Name=g12341.t1 NODE_1082_length_14098_cov_43.423 . mRNA 8842 10705 . + . ID=g12341.t1;Parent=g12341;Name=g12341.t1 NODE_1082_length_14098_cov_43.423 . five_prime_UTR 8842 9049 . + . ID=g12341.t1.utr5p1;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . exon 8842 9058 . + . ID=g12341.t1.exon1;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . CDS 9050 9058 . + 0 ID=cds.g12341.t1;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . exon 9244 9345 . + . ID=g12341.t1.exon2;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . CDS 9244 9345 . + 0 ID=cds.g12341.t1;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . exon 9498 10705 . + . ID=g12341.t1.exon3;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . CDS 9498 10100 . + 0 ID=cds.g12341.t1;Parent=g12341.t1 NODE_1082_length_14098_cov_43.423 . three_prime_UTR 10101 10705 . + . ID=g12341.t1.utr3p1;Parent=g12341.t1 #PROT g12341.t1 g12341 MNAQEVYQEVLRDVIEKIKPILADEGVPEDVADQILAIWTAKIDESKVTLGNLFAEDDQVYGQDVDQFPAPYPHGQGGGYYGVPGVFDSIPQQDGASDVPANQLAPANDAHCTRRKKRTPPDIEFVIDSAAIRHAVVGGRPTDPAAAPVVCDHVPSVPGQFDGPIDNDDEELGSAEDDEDESDIDNFESLSDVNHVLCQFEKVNRNKTKWKVSLKDGVMHLNNADRVFHKATGEFEF* # PASA_UPDATE: g14131.t1, single gene model update, valid-1, status:[pasa:asmbl_6107,status:12], valid-1 NODE_3475_length_3384_cov_36.3469 . gene 9 322 . + . ID=g14131;Name=g14131.t1 NODE_3475_length_3384_cov_36.3469 . mRNA 9 322 . + . ID=g14131.t1;Parent=g14131;Name=g14131.t1 NODE_3475_length_3384_cov_36.3469 . exon 9 322 . + . ID=g14131.t1.exon1;Parent=g14131.t1 NODE_3475_length_3384_cov_36.3469 . CDS 9 239 . + 0 ID=cds.g14131.t1;Parent=g14131.t1;5_prime_partial=true NODE_3475_length_3384_cov_36.3469 . three_prime_UTR 240 322 . + . ID=g14131.t1.utr3p1;Parent=g14131.t1 #PROT g14131.t1 g14131 VLTDGVHLFCRLPQRPYVYMGRLELESFDGHVRPMRFVWRLVDYGEDTLRREDSKCAFWDVVQCGFKGEQAHHTQP* # ORIGINAL: g14132.t1 original gene structure, not modified by PASA NODE_3475_length_3384_cov_36.3469 AUGUSTUS gene 1077 3155 . - . ID=g14132;Name=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS mRNA 1077 3155 . - . ID=g14132.t1;Parent=g14132;Name=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 3120 3155 . - . ID=g14132.t1.exon1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 3120 3155 . - 0 ID=cds.g14132.t1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 2639 2722 . - . ID=g14132.t1.exon2;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 2639 2722 . - 0 ID=cds.g14132.t1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 2295 2328 . - . ID=g14132.t1.exon3;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 2295 2328 . - 0 ID=cds.g14132.t1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 1937 2065 . - . ID=g14132.t1.exon4;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 1937 2065 . - 2 ID=cds.g14132.t1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 1526 1656 . - . ID=g14132.t1.exon5;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 1526 1656 . - 2 ID=cds.g14132.t1;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS exon 1077 1151 . - . ID=g14132.t1.exon6;Parent=g14132.t1 NODE_3475_length_3384_cov_36.3469 AUGUSTUS CDS 1077 1151 . - 0 ID=cds.g14132.t1;Parent=g14132.t1 #PROT g14132.t1 g14132 MNILVDANWVAKVADFGLTRLKVATAVTERVGTLWWMAPEVLKGISMTEKSDVYSYGILLWELADRGTPYERVFVERGVAGDRDIEILLDDISDGFRPNIPPQAPPAFSDLMQRCWSQSESSRPSFTLVASELASRNQFDERWKAKGTKRMSTAAHVDRSTA* # PASA_UPDATE: g8554.t1, single gene model update, valid-1, status:[pasa:asmbl_5969,status:12], valid-1 NODE_3389_length_3572_cov_38.4121 . gene 319 2576 . + . ID=g8554;Name=g8554.t1 NODE_3389_length_3572_cov_38.4121 . mRNA 319 2576 . + . ID=g8554.t1;Parent=g8554;Name=g8554.t1 NODE_3389_length_3572_cov_38.4121 . exon 319 639 . + . ID=g8554.t1.exon1;Parent=g8554.t1 NODE_3389_length_3572_cov_38.4121 . CDS 319 639 . + 0 ID=cds.g8554.t1;Parent=g8554.t1 NODE_3389_length_3572_cov_38.4121 . exon 1214 2576 . + . ID=g8554.t1.exon2;Parent=g8554.t1 NODE_3389_length_3572_cov_38.4121 . CDS 1214 2149 . + 0 ID=cds.g8554.t1;Parent=g8554.t1 NODE_3389_length_3572_cov_38.4121 . three_prime_UTR 2150 2576 . + . ID=g8554.t1.utr3p1;Parent=g8554.t1 #PROT g8554.t1 g8554 MAAPQRLRRTALVARPSTAALSLTPTRARSSHATHASPIRHHAAHDALDARARKAAQGLVAGGSASGVAGGVAGSAANGRGKGTTVADAQVSGRLHGEQHECALNVLLSFPGDLLNRTWLLHQCTPLFGLRADGPSLHRHARALAAHLATEHRGGASGAGGSSSHGSVAMETVPGFAIEPSEPNAIAIVVFPRVASKPGEGVADAAGAADIDAPPPPPLLTVILCSVGRVAEDNGRPSAAQSTHLPLVLVKGHVGLSRGVFAWLEASFDCRVSRLLLPPTELAWMAGAWAVLQDEDAPEDALAPPRFERPRRPLTLRYDMPDAVAGRGLASIDVTVDPATLVALAEAEAARGDAAGGGLLRSVEDNFSRVFGVRLAAVSLGSVGCTLGFVGREGRLKLLDDDPGCALLVLRHLTALVR* # ORIGINAL: g8555.t1 original gene structure, not modified by PASA NODE_3389_length_3572_cov_38.4121 AUGUSTUS gene 2643 3145 . - . ID=g8555;Name=g8555.t1 NODE_3389_length_3572_cov_38.4121 AUGUSTUS mRNA 2643 3145 . - . ID=g8555.t1;Parent=g8555;Name=g8555.t1 NODE_3389_length_3572_cov_38.4121 AUGUSTUS exon 3079 3145 . - . ID=g8555.t1.exon1;Parent=g8555.t1 NODE_3389_length_3572_cov_38.4121 AUGUSTUS CDS 3079 3145 . - 0 ID=cds.g8555.t1;Parent=g8555.t1 NODE_3389_length_3572_cov_38.4121 AUGUSTUS exon 2643 2857 . - . ID=g8555.t1.exon2;Parent=g8555.t1 NODE_3389_length_3572_cov_38.4121 AUGUSTUS CDS 2643 2857 . - 2 ID=cds.g8555.t1;Parent=g8555.t1 #PROT g8555.t1 g8555 MIRRSPVRHYLQVVLCVCEIYGGWMTFCPEWLTGSHALNTTDPLLLWVYLVFFNGLWVLVPGLLMWQSWQVIVGAVAEQQKRADADKGDKKKR* # ORIGINAL: g8334.t1 original gene structure, not modified by PASA NODE_5575_length_798_cov_108.725 AUGUSTUS gene 1 645 . - . ID=g8334;Name=g8334.t1 NODE_5575_length_798_cov_108.725 AUGUSTUS mRNA 1 645 . - . ID=g8334.t1;Parent=g8334;Name=g8334.t1 NODE_5575_length_798_cov_108.725 AUGUSTUS exon 1 645 . - . ID=g8334.t1.exon1;Parent=g8334.t1 NODE_5575_length_798_cov_108.725 AUGUSTUS CDS 1 645 . - 0 ID=cds.g8334.t1;Parent=g8334.t1 #PROT g8334.t1 g8334 MRHTVLHHFHDQPLGAHLGTSKTLAKLSARFYWPNMRSTVAAYIASCAPCQQRKATNKARAGLTVSPQIHGPFENVHLDACGPFQETTLLGNKYVIVMVDAFTGYVDAVPCKEVNHATVAHAILRYCLRHGPPLRIVTDNASPNVHDVVKQVLSALHVQHILTTPYHPEANAPVERFMRTLKTSEATLLAHIQTDWDVLLPYIVFAYNTSPHETT # ORIGINAL: g2984.t1 original gene structure, not modified by PASA NODE_6385_length_578_cov_44.7336_potentialcontaminant AUGUSTUS gene 1 532 . - . ID=g2984;Name=g2984.t1 NODE_6385_length_578_cov_44.7336_potentialcontaminant AUGUSTUS mRNA 1 532 . - . ID=g2984.t1;Parent=g2984;Name=g2984.t1 NODE_6385_length_578_cov_44.7336_potentialcontaminant AUGUSTUS exon 1 532 . - . ID=g2984.t1.exon1;Parent=g2984.t1 NODE_6385_length_578_cov_44.7336_potentialcontaminant AUGUSTUS CDS 1 532 . - 0 ID=cds.g2984.t1;Parent=g2984.t1 #PROT g2984.t1 g2984 MEAVGAAAAGDMRLSVGVPNGEGTPYIHPGVLAVIDTHKYFEFGCPDMGPFNATAKASLNRPLPHFTLTSANRTTAGSLKRRFLAIRPDFWFVKDGTPRFMTNFFAVLLARNGIAVTLPALLASIPRRIAPATDDVRALCSGSQMCLSITQGPISADGVIAAMNDELRANFPYSASR # PASA_UPDATE: g12158.t1, single gene model update, valid-1, status:[pasa:asmbl_6867,status:12], valid-1 NODE_401_length_24624_cov_43.1047 . gene 7931 13642 . + . ID=g12158;Name=g12158.t1 NODE_401_length_24624_cov_43.1047 . mRNA 7931 13642 . + . ID=g12158.t1;Parent=g12158;Name=g12158.t1 NODE_401_length_24624_cov_43.1047 . exon 7931 8803 . + . ID=g12158.t1.exon1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . CDS 7931 8803 . + 0 ID=cds.g12158.t1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . exon 9082 9216 . + . ID=g12158.t1.exon2;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . CDS 9082 9216 . + 0 ID=cds.g12158.t1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . exon 9447 12200 . + . ID=g12158.t1.exon3;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . CDS 9447 12200 . + 0 ID=cds.g12158.t1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . exon 12433 13018 . + . ID=g12158.t1.exon4;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . CDS 12433 13018 . + 0 ID=cds.g12158.t1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . exon 13281 13642 . + . ID=g12158.t1.exon5;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . CDS 13281 13519 . + 2 ID=cds.g12158.t1;Parent=g12158.t1 NODE_401_length_24624_cov_43.1047 . three_prime_UTR 13520 13642 . + . ID=g12158.t1.utr3p1;Parent=g12158.t1 #PROT g12158.t1 g12158 MATASPRPSGAHSRGPHSPRTERSLTDDHVGPKRTQSLHESPVRKPAPSPLGISQPSTQTTRTSTSSSSFVVPGANQQQSAISALRKPPSGRTTPVQAGCHGLDSVSPHRLTQGLPVSFAGPMSTTTSPMRKTNPLGHTQSVGGLFGSPGSATTREDGLQQQYRAIQLQQTQSQRQTGEGSRGTIRRTASSDSAEIIATRRQQQQQPQQTIRARSPSPAGHIGGSISSVAVGNGPAAKGFQNRTGDNNCFLNGVIQVLWHLSSFREAFEVTDAHDCSESSSPGRCVFCALKAIFNEYQFGEGAHLPPDSLRRALSSVHEKDLRFQVGQMDDAAECFEAVINHLHDLLAGKSRSADSYGACNPPCFVHAVFGMSLSEASLCHSCGRKSSEFSFEKIVHYVSVRALARAAERKRCRRKSIVGLDQERPTSSKTARPNTALTSTSERTSSGEGDTAASPDGLPPGWEASTTPDGEPFFIDHNTGTTQWMDPRLASLAGLPPGWEYKISEHGEVIYIDHNTRTTHTVPPPQASGMQSYINGRLPHLDFDLLMYEAAFGAGAEEEQSQRRCSLPADHPLPPVGAMHMPSPDPAQVPAQVPAQVEAVLLIAESSSGVECVRQDGTENSHVQQRRRSSVAAHVSASGQSSGEGDSSVDDALLTIDESMWLRRGSEAQVTSVASMAAAVASIAAAVASVTAVAAAAVAPVENATVENAASANLNTETNAKVDVVENEGHTKTAASDADESPSPTIVEDSSAAIADDGVCENEEKNDASHNVDVSDVVDFPVDTASLRRASLSHKPNLDGGPETALMSTTDSNNATTGAVEGDVARRASRGHADGGEKPLENPAPENVHTTAAEASIAQTDAQPQVKRCNGSASLETRLQRSARVLAVGLVWDTSSPTTQQVEDVLELIGPVVDPAVMFGGASEEHATGLLMQLRGVICYYGLHYIAFFYNSISRRWLMCDDATVKDVGPRWIDLLLKCRIGRFQPSVLFYELCDSEAAAAIRREHKEQYSVYLMRAAVDHIKSEHAQFALSDQRSREFGGSTAHSRTHSTASKQVLGPSGASSSTLNMNASANGTVGDGAVDVHEGDLSLSSSGRFAAAKRRYTGDEELAMALQRELNNEASTGHGSSPRVSRVQQQQGGMSKQNSSQQLVQSVSQQHQQPPQHQQLQHVQQQQQQQMKASRSNDSLSRPRESEDMRLAMRLHEQEMAAAKAREKQGDLLMYTKKLGGLVRKWKQRLFYLDANGLQYFKKDKLRLLADSPEAFVVDKIDTPKKARSLGETPHYFFTIRYSGNMTVLAAKTDEEREAWIACIARLKTPAPTVKPSKVSNSEAWSAPPPRSNGGHVDGGVSRTGSVNRPSDATVRRVEQSTSSARSSPSMQRHAMAGAASAGNGDTTPRRATSMYQSSLQGSRGQSAAASSDRLARGKSEYGAREHPPSPTLSASSGRSSRSKTSQPDMPALIANSCICGLTGDFVCGGCKYQRYCSTGCQNKHWRVHMAACRAVAMKAKLQEQQQQQQQQQQQQRQE* # PASA_UPDATE: g12155.t1, single gene model update, valid-1, status:[pasa:asmbl_6863,status:3], valid-1 NODE_401_length_24624_cov_43.1047 . gene 1077 3638 . + . ID=g12155;Name=g12155.t1 NODE_401_length_24624_cov_43.1047 . mRNA 1077 3638 . + . ID=g12155.t1;Parent=g12155;Name=g12155.t1 NODE_401_length_24624_cov_43.1047 . five_prime_UTR 1077 1185 . + . ID=g12155.t1.utr5p1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 1077 1245 . + . ID=g12155.t1.exon1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 1186 1245 . + 0 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 1398 1586 . + . ID=g12155.t1.exon2;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 1398 1586 . + 0 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 1710 2212 . + . ID=g12155.t1.exon3;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 1710 2212 . + 0 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 2380 2441 . + . ID=g12155.t1.exon4;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 2380 2441 . + 1 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 2578 2719 . + . ID=g12155.t1.exon5;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 2578 2719 . + 2 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 2921 3056 . + . ID=g12155.t1.exon6;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 2921 3056 . + 1 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . exon 3235 3638 . + . ID=g12155.t1.exon7;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . CDS 3235 3444 . + 0 ID=cds.g12155.t1;Parent=g12155.t1 NODE_401_length_24624_cov_43.1047 . three_prime_UTR 3445 3638 . + . ID=g12155.t1.utr3p1;Parent=g12155.t1 #PROT g12155.t1 g12155 MLRSVVASALRPQRTLLSMRALRYSTEAPLPRGSTDDSAHYPGASCGFTYKLNLLQPSQNTAIPAYRVLDRSGLIIDAAEDPKLDKETVLKMYKSMLQLDIMDKILYNSQRQGRISFYMTNSGEEATHIGSAAALNLGDMVFGQYREAGVLLWRGFSLDDFMNQCYSNTKDPAKGRQMPVHYGSRQLNFQTISSPLATQMPQAAGAAYAYKRQNKPNVVICYFGDGAASEGDAHAALNFASTLDAPCIFFCRNNGYAISTPTKEQYRGDGIASRGSGYGIDTIRVDGNDVFAVYNATKEAKRHALEKNRPVLIEAMTYRIGHHSTSDDSSAYRSMQEVNYWDKEDHPITRLLSFINRSKWWTPEEDEAFRASARKDILAAFGAAEKLLKPAIANMFTDVFDVPSKQLLEQEQAMLAHIAKYPNDYPVDSYAKE* # PASA_UPDATE: g12157.t1, single gene model update, valid-1, status:[pasa:asmbl_6868,status:3], valid-1 NODE_401_length_24624_cov_43.1047 . gene 5047 7217 . - . ID=g12157;Name=g12157.t1 NODE_401_length_24624_cov_43.1047 . mRNA 5047 7217 . - . ID=g12157.t1;Parent=g12157;Name=g12157.t1 NODE_401_length_24624_cov_43.1047 . five_prime_UTR 6983 7217 . - . ID=g12157.t1.utr5p1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . exon 6942 7217 . - . ID=g12157.t1.exon1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . CDS 6942 6982 . - 0 ID=cds.g12157.t1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . exon 6593 6703 . - . ID=g12157.t1.exon2;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . CDS 6593 6703 . - 1 ID=cds.g12157.t1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . exon 6276 6423 . - . ID=g12157.t1.exon3;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . CDS 6276 6423 . - 1 ID=cds.g12157.t1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . exon 5829 6119 . - . ID=g12157.t1.exon4;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . CDS 5829 6119 . - 0 ID=cds.g12157.t1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . exon 5047 5492 . - . ID=g12157.t1.exon5;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . CDS 5106 5492 . - 0 ID=cds.g12157.t1;Parent=g12157.t1 NODE_401_length_24624_cov_43.1047 . three_prime_UTR 5047 5105 . - . ID=g12157.t1.utr3p1;Parent=g12157.t1 #PROT g12157.t1 g12157 MAAPVYPDLYAKHSWYHGGVSREDATKQLSTTGSFLVRDSSSKTDLVLTVRERVGVKNYVIENKNGKFAVAGGSTHFGSLAALIEHFHNHVLDDSKLSKAINRAPPPGAPSAPPPAVPGGPTAAAVALPPQGPKPGTPIVQYVAEVVCMYNFGGADADELPFVKTEVLKVIEYTTPEWWMAANQQGRRGMIPSNYVKITSQLGPQRVSATDATPAFTASIPHVSVPTPAPTPTPAPAVVVEVVPPPSHPIPPAPKKNVTPAGTASPASARKTDASRLSDVPPPSPKTSASAAAAASDSGRLLSKNEIDSFLDTNFNDLMSELDNL* # ORIGINAL: g12161.t1 original gene structure, not modified by PASA NODE_401_length_24624_cov_43.1047 AUGUSTUS gene 19418 23386 . + . ID=g12161;Name=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS mRNA 19418 23386 . + . ID=g12161.t1;Parent=g12161;Name=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 19418 19550 . + . ID=g12161.t1.exon1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 19418 19550 . + 0 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 19649 19710 . + . ID=g12161.t1.exon2;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 19649 19710 . + 2 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 19847 20030 . + . ID=g12161.t1.exon3;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 19847 20030 . + 0 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 20124 20231 . + . ID=g12161.t1.exon4;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 20124 20231 . + 2 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 20513 20573 . + . ID=g12161.t1.exon5;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 20513 20573 . + 2 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 20826 20919 . + . ID=g12161.t1.exon6;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 20826 20919 . + 1 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 21026 21062 . + . ID=g12161.t1.exon7;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 21026 21062 . + 0 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 21217 21290 . + . ID=g12161.t1.exon8;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 21217 21290 . + 2 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 21442 21524 . + . ID=g12161.t1.exon9;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 21442 21524 . + 0 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 21639 21737 . + . ID=g12161.t1.exon10;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 21639 21737 . + 1 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 22285 22456 . + . ID=g12161.t1.exon11;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 22285 22456 . + 1 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 22553 22667 . + . ID=g12161.t1.exon12;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 22553 22667 . + 0 ID=cds.g12161.t1;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 23166 23386 . + . ID=g12161.t1.exon13;Parent=g12161.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 23166 23386 . + 2 ID=cds.g12161.t1;Parent=g12161.t1 #PROT g12161.t1 g12161 MACEENGGGGFALLPDPIGLDAPPRLSGTPFDPARRELVSIEYPGYIRNVDKALESLGGMQTIAKCIEHPTVALRVKLRPGDICSHGPQASLVKESPKLLLKVSSRDRQVVASEIVGVIGTSFRFDNMADFQYIPSSMISKSTAADHRLHAEGAHDPPVHMLGSRIEMLPIMFSRNGRVQEYGFKDSAAKKQKDKEEKKSATKEVVPPAEELSQQELEHCKRFSLTEMEIPPALTDEEVEKLSKDEHVIYELFRKRPMWTKQALLNQMDGLAILDKMKGWLPKLSYFISNGPWRRVWVRRGFNPVADPSAMISEGDTTITLCENHRATHIFDGVQLPKQAQIVYQLVDITEPEVKAIVSGLQPTSTCTEANGWCDGAVLAQVRKLMKEKTEALLPPGLAKTKHPRGFDILHAVAGSGVFYGGLPPDAEADADADADAGADGGGDAHEPRYGAQSTFMMDDVDGFTLLENDDAYADDSSDD* # ORIGINAL: g12162.t1 original gene structure, not modified by PASA NODE_401_length_24624_cov_43.1047 AUGUSTUS gene 23814 24210 . - . ID=g12162;Name=g12162.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS mRNA 23814 24210 . - . ID=g12162.t1;Parent=g12162;Name=g12162.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 24110 24210 . - . ID=g12162.t1.exon1;Parent=g12162.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 24110 24210 . - 2 ID=cds.g12162.t1;Parent=g12162.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 23814 23951 . - . ID=g12162.t1.exon2;Parent=g12162.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 23814 23951 . - 0 ID=cds.g12162.t1;Parent=g12162.t1 #PROT g12162.t1 g12162 HTDPVQCFETSKKDIFSISTSNRMGIHTGLDKQGTNASFTSIKLRSEYVRGAVTTLSILPQNQLMLLGTDSGALNLYA* # ORIGINAL: g12159.t1 original gene structure, not modified by PASA NODE_401_length_24624_cov_43.1047 AUGUSTUS gene 14306 15569 . - . ID=g12159;Name=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS mRNA 14306 15569 . - . ID=g12159.t1;Parent=g12159;Name=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 15432 15569 . - . ID=g12159.t1.exon1;Parent=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 15432 15569 . - 0 ID=cds.g12159.t1;Parent=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 14669 15294 . - . ID=g12159.t1.exon2;Parent=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 14669 15294 . - 0 ID=cds.g12159.t1;Parent=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS exon 14306 14363 . - . ID=g12159.t1.exon3;Parent=g12159.t1 NODE_401_length_24624_cov_43.1047 AUGUSTUS CDS 14306 14363 . - 1 ID=cds.g12159.t1;Parent=g12159.t1 #PROT g12159.t1 g12159 MSQFDQECGVPYQLYMDGSGELRRCLKRKPSTDDLLTLEDMCQHQSKRPLYDASSDMVSHMFSVPYDDGTGTQQMQVVGGLSGIPFPHRSADSQLIMSSSHSVAPTYVVMAGGHYSAGVVAVPPEQQLQLQQQQLQQQLQQQQQQQQGYYIPDANAQRRAFGAGCADIEFDDERPTVGDHGEVSMMDVGDASTSLHGGVGLTGGYASAAVYDPSPALYQPTATRPVRRNVEDIIEYSSNPNTCYCGCSTNHGKTRFASCKDYTFDPLDPRWNL* # PASA_UPDATE: g12156.t1, single gene model update, valid-1, status:[pasa:asmbl_6866,status:12], valid-1 NODE_401_length_24624_cov_43.1047 . gene 4033 4559 . + . ID=g12156;Name=g12156.t1 NODE_401_length_24624_cov_43.1047 . mRNA 4033 4559 . + . ID=g12156.t1;Parent=g12156;Name=g12156.t1 NODE_401_length_24624_cov_43.1047 . exon 4033 4559 . + . ID=g12156.t1.exon1;Parent=g12156.t1 NODE_401_length_24624_cov_43.1047 . CDS 4033 4455 . + 0 ID=cds.g12156.t1;Parent=g12156.t1 NODE_401_length_24624_cov_43.1047 . three_prime_UTR 4456 4559 . + . ID=g12156.t1.utr3p1;Parent=g12156.t1 #PROT g12156.t1 g12156 MAIRSPPTPPIARSGIPDLYRHTALNPLLNGRTQKRPVKNNNRIRLLFPRTNQRNRHSHQKDPLPHMSGRKGPQPASHGSAPQPAASAPQPSSGSKAYQAQYGFKSDFHLGISYGIKPGVTTTRSKSNPSRMRLTSGTET* # PASA_UPDATE: g12160.t1, single gene model update, valid-1, status:[pasa:asmbl_6865,status:3], valid-1 NODE_401_length_24624_cov_43.1047 . gene 16324 18894 . + . ID=g12160;Name=g12160.t1 NODE_401_length_24624_cov_43.1047 . mRNA 16324 18894 . + . ID=g12160.t1;Parent=g12160;Name=g12160.t1 NODE_401_length_24624_cov_43.1047 . five_prime_UTR 16324 16375 . + . ID=g12160.t1.utr5p1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 16324 16378 . + . ID=g12160.t1.exon1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 16376 16378 . + 0 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 16528 16635 . + . ID=g12160.t1.exon2;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 16528 16635 . + 0 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 16748 16811 . + . ID=g12160.t1.exon3;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 16748 16811 . + 0 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 16934 17065 . + . ID=g12160.t1.exon4;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 16934 17065 . + 2 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 17208 17292 . + . ID=g12160.t1.exon5;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 17208 17292 . + 2 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 17436 17520 . + . ID=g12160.t1.exon6;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 17436 17520 . + 1 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 17671 18219 . + . ID=g12160.t1.exon7;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 17671 18219 . + 0 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . exon 18460 18894 . + . ID=g12160.t1.exon8;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . CDS 18460 18816 . + 0 ID=cds.g12160.t1;Parent=g12160.t1 NODE_401_length_24624_cov_43.1047 . three_prime_UTR 18817 18894 . + . ID=g12160.t1.utr3p1;Parent=g12160.t1 #PROT g12160.t1 g12160 MDPMLLRPLQDEDPEVFDIIEKEKHRQWSGLELIASENFTSLAVMEANGSCLTNKYSEGLPGARYYGGNEYIDEVERLAQKRALAAFGLDAEKWGVNVQPYSGSTANFAAFTGMLKPHDRLMGLDLPSGGHLTHGYQTAKKKISSSAIYFESMPYQLDQTTGVIDYARLGENARLFRPNLIICGGSAYPRDWDYGSLRKIADEHSAYLMMDMAHISGLVAGGVQNNPFEFCDVVTTTTHKTLRGPRAGLIFYRKGPKGDRLEDLEQRINFAVFPSTQGGPHNNTIAAIAVALKQVATPEFKDYSRQVIANSKALAEALKKRGYKLVTDGTENHLVLWDLRPQDITGNKVEKLLEAANITVNKNSVVGDKSAIVPGGVRLGTPSLTSRGFKEADFEKVAEFLVVALKIALGIQEKVGKKLVDFEAALKDDADIKALRTDVEAFAKSFPMPGFHTETMKYKN* # PASA_UPDATE: g9649.t1, single gene model update, valid-1, status:[pasa:asmbl_1203,status:12],[pasa:asmbl_1204,status:13], valid-1 NODE_1321_length_12128_cov_40.3564 . gene 8183 12021 . - . ID=g9649;Name=g9649.t1 NODE_1321_length_12128_cov_40.3564 . mRNA 8183 12021 . - . ID=g9649.t1;Parent=g9649;Name=g9649.t1 NODE_1321_length_12128_cov_40.3564 . five_prime_UTR 12014 12021 . - . ID=g9649.t1.utr5p1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . exon 11532 12021 . - . ID=g9649.t1.exon1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . CDS 11532 12013 . - 0 ID=cds.g9649.t1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . exon 10394 11321 . - . ID=g9649.t1.exon2;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . CDS 10394 11321 . - 1 ID=cds.g9649.t1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . exon 10044 10153 . - . ID=g9649.t1.exon3;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . CDS 10044 10153 . - 0 ID=cds.g9649.t1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . exon 9379 9482 . - . ID=g9649.t1.exon4;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . CDS 9379 9482 . - 1 ID=cds.g9649.t1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . exon 8183 9124 . - . ID=g9649.t1.exon5;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . CDS 8886 9124 . - 2 ID=cds.g9649.t1;Parent=g9649.t1 NODE_1321_length_12128_cov_40.3564 . three_prime_UTR 8183 8885 . - . ID=g9649.t1.utr3p1;Parent=g9649.t1 #PROT g9649.t1 g9649 MDAHLSVSKTPARSASSDEVGVRVASSSAGSSPLRSSAHSAQSEHHTELSTSPDELAVLPAAFQRRGNAPLSHASNHSAPVSRSTSHHRDMPAVGLHASSARGEPSSPKSNGHRRSRSEVPVGMLASRGHVRAGSGLSAVDASRSSGGASRPTSFVGGLISGIFGMRRSDNDLLGGPATANASVSGGGSGGSAIDSAGLVLESRPRYLPPKDPAELERQMRQYDSMVSEAKRRADKEQRARLARQDEKDRLVSSALQQWTAVLPQFEVHRRTKKLRDLWWQGLPPSLRGRIWGLAIGNDLHITRELFEIFLMHARNKLQTTTEDDYYNSASMAQSASPPSSRVGAGWARGPAHPHVSESSADADKLSIGSSSGGALLMGRESSVHLICLDVSRTFPSLGIFQGGGPYYDSLRSVLEAYVCYRPDVGYVQGMSFLASMFLLNMDVVDAFTCMTNLLNKPLHMAFYRMDMNLMAPYLSAFMVIMEQTIPSLHAHMVRLKINPDFYMIDWILTMFSKALPLDVASRVWDVYFCYGDPFVFRTALGIFRLYLDELLSMEFEEAMEFITHLPQDVSDTALFHAIGLIQFTERQFSDALANEKARLAKNLTSSKGSSSDSITLLSK* # ORIGINAL: g9648.t1 original gene structure, not modified by PASA NODE_1321_length_12128_cov_40.3564 AUGUSTUS gene 2638 7755 . + . ID=g9648;Name=g9648.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS mRNA 2638 7755 . + . ID=g9648.t1;Parent=g9648;Name=g9648.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 2638 7755 . + . ID=g9648.t1.exon1;Parent=g9648.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 2638 7755 . + 0 ID=cds.g9648.t1;Parent=g9648.t1 #PROT g9648.t1 g9648 MTTPSTSGHDPPDPFKEDDHGDEGKFCSRFPIPPTSIIGASKCSLTHPGARNLVVNKGTRIEVYAYDIGTESLSTDNDADFDGLADAKCSERNPFQIVMLSEKSIYGGYAHAVEPLRPPECSVDLLWVCTSALRCAIFGWSGEAGALVMLWSADVSSIFFSIAGTRQRNRVHSNGKYVGISFVKGEFHLAEIVYDGYKFDEESCSHCGRVGIQVHTFKVGCDDELIDYALMAEETGLIFTTLRLAGIFGEGTHAHPQNSAPTSSSTRRYLRIFRLDFDAHEFIELSSEKFVDGAADISLLQVVQTPGNGSGEGVIVLSPKEAILYTDDRIAARTSVPFAVPQAASELRVGSLGSAPVSSSLLDNGQVLVGYADGRIHMVACYMLHAATRTGLFRRHRKAAFELSVVEVLSSADAEGVSGGQCGVLALSRIDIVSGGMWVEVNVDNGDAHEVQSRGIVFVISAFGDSSIASIAIVADAPPTVAVNVEDAEPCLLNTLSVPCAREKIRVLHRFASLGPITCMASLRPSQLGVGGMDKEDREGDGGAGLLIGSGLGTGGMVTLARPGIGFGEVASVLMRGITGLWSVVVGAKSHLVMSFVNETRIMTFGDDDVLEEAVLPFMHHDCQTLYAGNAAGGVVFVTAKGVRFVMDADVDADAAEGEHASPRVADWQPDKGRSIVIAGGADGCVVVALSEDKLLCYLECAVGEDCYPAVHFVSSVSLSADVSCVSLFVDDAMDPLEPMSTPVSAPKEAPATRSGSFDLGGIVNRARRHIRNASITGLGFASAWGQRDRQRSDADAGAGEGSTPTEAHLNPASTKPAPVHATARHCYVAVGLWRTNDVLVLSAPTLEIVAHRQLPLGVVSRSILMQRIGIGGPCLLLVGLADGHLVYFEFSRRKFPDMLSGRRTLLVGSSPLALSPFARKTSHSREEEWCVLIGCDRSAVVRMTGGRVRIHPAGLAMPARLCCKLSTTPDASTESFVIATADAMYVGEMDGDLSRYRLTLRSDTIGCTPRGLAPFKVKEPAAGHVVPSSTDGAGGGDGFDAGAGGNEAELSEADEQVYCDYVAVLCGEGNGDFARSVIVWDPMARRIVGRCRLPGRLAGTAVAALGTPLAHMPRASDSSDTIASAVADEDFPEQLARDTVVTGATAGVAAEARERDTPASVRSASSLASVAVAEVPSPHMTSVRSVDGAGAAPDASRATSAADHVVVRVDAANGDDDTECDPASLAHTATGKPRELMPAVEFETPSDGDAYIAVVANPQSDPGEGGGDDHSDGQNGIVAVYNVRKLPLMGQFDGTAAPPEARDKGPWPFRVSLLCSSEVEGPAACVAEYNGMIAVGSGCTLSLHFLSIRSDVLRRRSFASLRQVASRTFDAFIVSVKVAGGHLVVCDMLEGVHVVSYNPAVVEQQRRLRPVESMHSEGQASDADRPNALSIVGVAEPPRSGYIRACSAVPGHGIAMVAADCFGAVRVHSLPPQIPTTSTVAAVSDAMRALHLHDTAHTHPGDAAARVHTVAYGMLPAGCTLLMGEWPFELPLHWSADTRAIGSPGILVGCASGAVGLLRSTPPELHVMLSALEAALSTKTLTSCWAIETSTARLRSSDYSASNPVAVTMGSGTSIARPAVHTPVPHMELGGEGAIAAEGTLAGANQANDDGGGSACTVSAFVDGDFVAEFLALGEDEQEAIAAEMAITVGELTSELEAFEYSLM* # ORIGINAL: g9647.t1 original gene structure, not modified by PASA NODE_1321_length_12128_cov_40.3564 AUGUSTUS gene 373 1996 . - . ID=g9647;Name=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS mRNA 373 1996 . - . ID=g9647.t1;Parent=g9647;Name=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 1855 1996 . - . ID=g9647.t1.exon1;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 1855 1996 . - 0 ID=cds.g9647.t1;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 1592 1679 . - . ID=g9647.t1.exon2;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 1592 1679 . - 2 ID=cds.g9647.t1;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 1263 1394 . - . ID=g9647.t1.exon3;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 1263 1394 . - 1 ID=cds.g9647.t1;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 877 963 . - . ID=g9647.t1.exon4;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 877 963 . - 1 ID=cds.g9647.t1;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS exon 373 601 . - . ID=g9647.t1.exon5;Parent=g9647.t1 NODE_1321_length_12128_cov_40.3564 AUGUSTUS CDS 373 601 . - 1 ID=cds.g9647.t1;Parent=g9647.t1 #PROT g9647.t1 g9647 MASEPNDVGGSTVSIPHPTLKTYEDALRTAHQQDYSSIEKHKIISLAGVDHFSRPVIVFAACNMPSLKEINMNLLLQYIIFTLDKVVEADYVIVYLHAGLRSDARPTIGWIRQVYRVFDRKYKKNLKSLYIVHPTMFIRVLMGMVKPFISSKFAKKLQYIFSLQDLANHIHMDQLEVPDYVSKYDEWSSLDRSYKLAPRNRSSTYPYVERTPPFLLLLISLFLVI* # ORIGINAL: g2926.t1 original gene structure, not modified by PASA NODE_9441_length_332_cov_43.2451_potentialcontaminant AUGUSTUS gene 31 332 . - . ID=g2926;Name=g2926.t1 NODE_9441_length_332_cov_43.2451_potentialcontaminant AUGUSTUS mRNA 31 332 . - . ID=g2926.t1;Parent=g2926;Name=g2926.t1 NODE_9441_length_332_cov_43.2451_potentialcontaminant AUGUSTUS exon 31 332 . - . ID=g2926.t1.exon1;Parent=g2926.t1 NODE_9441_length_332_cov_43.2451_potentialcontaminant AUGUSTUS CDS 31 332 . - 1 ID=cds.g2926.t1;Parent=g2926.t1 #PROT g2926.t1 g2926 SPLGGNPALETPEGYIFESNAILRYIARLDKTGALYGKTQFDAANVDAWLDLALSEFDPLLCHVIKVMFTGCALPTDFLEASESVLQSIDNWLETRTFLV # ORIGINAL: g2218.t1 original gene structure, not modified by PASA NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS gene 721 3924 . + . ID=g2218;Name=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS mRNA 721 3924 . + . ID=g2218.t1;Parent=g2218;Name=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS exon 721 1170 . + . ID=g2218.t1.exon1;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS CDS 721 1170 . + 0 ID=cds.g2218.t1;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS exon 1537 3224 . + . ID=g2218.t1.exon2;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS CDS 1537 3224 . + 0 ID=cds.g2218.t1;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS exon 3564 3617 . + . ID=g2218.t1.exon3;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS CDS 3564 3617 . + 1 ID=cds.g2218.t1;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS exon 3813 3924 . + . ID=g2218.t1.exon4;Parent=g2218.t1 NODE_3069_length_4407_cov_37.1341_potentialcontaminant AUGUSTUS CDS 3813 3924 . + 1 ID=cds.g2218.t1;Parent=g2218.t1 #PROT g2218.t1 g2218 MSSLSTNGWITVGVSIFLFLMLLTNKIATDFAFFFCLMILVFTGVLTEDDAVKGFSNTGMLTVAALFIVAHGLDSTGAMRLITKKLFTTDASINGALLRLTIPVAILSAFFNNTPIVAMLMPEVINWCRRMGRSPSRLLMPLSNAAVLGGVITIMGTSTNLLVNGLLEQSKKPKLSLFSIAPIGICVCVAGISTMAILGKWLLVDRGIGDDVFSNPREYTAELIVDEKGPLASGRRLCDINGPTIAGEQTSKVSPIEIIRDGTVIPAPSSTQMVMGGDRLVFAGILASILPLQHVDGLRLATDSEFLTGNSAPKILIPSPAGILRRINKFRSADGRGNGTDNADNANEAVSLGSISSKAPSYDTANAGVVSIGATTKLQQEGNAGGIAALTTTQLRNDDDDGSGTSTGSADGATPTSDFGGDSTLPRYGENDNNRADKTDLSIVVVAENDEKIAIEEALPEVSSAAPAASTSIAAGAKRDLFEVVLSHNSPLIGKPVGDGSFREHYDAAVVAVARNGELVHCSRLHDWKLQAGDFLLLDARPSFRDRHAKSPDFYIVTLQEAEMTPTPIPSRWRAPFALACLLVMIILAAVETTTMFMASWACAVVFIVTGIVTVTDARKSFDLNVLITIAGSLGLGKALEASGAAKVIANSLISLSGGHSAWGSLAAIYMACMIITEFVTNNAAATLLYPIAMATAKQLGVDYKPFIIAIMISASAGFAFPWGYQCSLMVYGPGRYKLVDFLKLGIVLDLVVAAVCIGLIPLIYSF* # ORIGINAL: g10995.t1 original gene structure, not modified by PASA NODE_1577_length_10372_cov_44.8679 AUGUSTUS gene 3954 6553 . - . ID=g10995;Name=g10995.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS mRNA 3954 6553 . - . ID=g10995.t1;Parent=g10995;Name=g10995.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS exon 6394 6553 . - . ID=g10995.t1.exon1;Parent=g10995.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS CDS 6394 6553 . - 0 ID=cds.g10995.t1;Parent=g10995.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS exon 3954 6001 . - . ID=g10995.t1.exon2;Parent=g10995.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS CDS 3954 6001 . - 2 ID=cds.g10995.t1;Parent=g10995.t1 #PROT g10995.t1 g10995 MARKKAGQPMPFIPCHYAPKAGGRVCSGKAEMITDDRRLRLISMYMSEDATMEGLTRVHDFEFIPEDIRKTRRWPMYAQLCQTCQVLLPAGTIIVPTRRSNVLPRPQNTPPRQLRANELDVDGGLSAGGSSLDDATLNGAPVDPLGVNTHVALGVGLSGAIISNAPIASVASNGGIGIMPSVGGDRVEGEEGVIRDGQTQAAEGLQVLSETFPGGIADVQSLCEQYIRGHPQPVRVEVLEGTVVRASVAAQDMRDMDMQSKLANPLPSMASLTLVIKADLRYELFAEASIRRRPFEAGIATPSALRRILAIMAGNPRVNVGHCRGFSNANGKYGEKGDQIPNATIEDSYFGCRIRSHQCPILAPRANLAGSSVLPVCDNCRKLKSQLQKREQRAVKVATRDKEKIDDSAAVVVERTGANSHVALNVQSRDELIERARNMAEEVRKLRHKLQTLQKVSEQREEKVPFDDDGRSAVIDFAVLPPERRDAIEAALRKHRGTNSEAFFKDQVELANRMRRAREANKNERTDRQGFRWSKASMLVALSIYIRSHGAYRLLTDDPKMRGIFHLPTRQTLKRFLSEARKAWALQNGGSAVPQQALDEISDGSDSEEEQFESLGEHHPGGMVDDDPMGHNPDEDDGGDGHAHAHEHAHAHEHAHAHHQLHGVHSMSGVVDGMGGSSLVPGVSFHVDGSGGVAYASGDGSASVGVPGGSVRGKRPAEEALDGDDRHGSLRAHLE* # PASA_UPDATE: g10994.t1, single gene model update, valid-1, status:[pasa:asmbl_2022,status:3], valid-1 NODE_1577_length_10372_cov_44.8679 . gene 726 2952 . + . ID=g10994;Name=g10994.t1 NODE_1577_length_10372_cov_44.8679 . mRNA 726 2952 . + . ID=g10994.t1;Parent=g10994;Name=g10994.t1 NODE_1577_length_10372_cov_44.8679 . five_prime_UTR 726 901 . + . ID=g10994.t1.utr5p1;Parent=g10994.t1 NODE_1577_length_10372_cov_44.8679 . exon 726 991 . + . ID=g10994.t1.exon1;Parent=g10994.t1 NODE_1577_length_10372_cov_44.8679 . CDS 902 991 . + 0 ID=cds.g10994.t1;Parent=g10994.t1 NODE_1577_length_10372_cov_44.8679 . exon 1431 2952 . + . ID=g10994.t1.exon2;Parent=g10994.t1 NODE_1577_length_10372_cov_44.8679 . CDS 1431 2621 . + 0 ID=cds.g10994.t1;Parent=g10994.t1 NODE_1577_length_10372_cov_44.8679 . three_prime_UTR 2622 2952 . + . ID=g10994.t1.utr3p1;Parent=g10994.t1 #PROT g10994.t1 g10994 MNQRRSPCRRLCLLSFIVTVVLVAYFELPESSRAMLLQPSIRLKLADSVRAQRDGSAAFAGDSSARLDNGSPAVIVDPQLNGANDEPTLSNAATASVPSKNGGAAVNGEAAKKPPLAPVTIVIDDFEYVMRFYGGSPGKWVEGAKNCNLGYECTVTGDSSHLTSADAILYDRSAILWKNERIIRHHPAQVSFTLWHESYGNVFKNDPKKHALVDHFVSFRLDESIPLPYGCDDTISVLSQFDNIVTGMHPRPDQTNLVASFISNCEIPPLNRTGYIAEMMQYIHVDNHGACLRNVEGRWDRHDATRMQTKRDTLKSYKFAIAFENLAEESFVTEKVFDALFSGAVPIYMGAPDIHLHVPGPKSVIRTADFPGPKELAEYLMELDKDDAKYAEYFKWDRAHTQNFVDKYCATPFYCRMCKLVRERKL* # ORIGINAL: g10993.t1 original gene structure, not modified by PASA NODE_1577_length_10372_cov_44.8679 AUGUSTUS gene 223 365 . + . ID=g10993;Name=g10993.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS mRNA 223 365 . + . ID=g10993.t1;Parent=g10993;Name=g10993.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS exon 223 365 . + . ID=g10993.t1.exon1;Parent=g10993.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS CDS 223 365 . + 2 ID=cds.g10993.t1;Parent=g10993.t1 #PROT g10993.t1 g10993 RHDHYLVCAANADEENDWIQSINAYITNDPVLAMMRAKKAAITHEY* # ORIGINAL: g10996.t1 original gene structure, not modified by PASA NODE_1577_length_10372_cov_44.8679 AUGUSTUS gene 7845 9019 . - . ID=g10996;Name=g10996.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS mRNA 7845 9019 . - . ID=g10996.t1;Parent=g10996;Name=g10996.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS exon 8974 9019 . - . ID=g10996.t1.exon1;Parent=g10996.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS CDS 8974 9019 . - 0 ID=cds.g10996.t1;Parent=g10996.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS exon 7845 8545 . - . ID=g10996.t1.exon2;Parent=g10996.t1 NODE_1577_length_10372_cov_44.8679 AUGUSTUS CDS 7845 8545 . - 2 ID=cds.g10996.t1;Parent=g10996.t1 #PROT g10996.t1 g10996 MATNEYGDLTVPGTADDTPAVAEFDLYNATFGTFDLYATGAHIPVTTTTVPVVDQAWLNSNIDLWDRASLACNQGVSPAVVGDDSVPNSGSESASNIFDLFSVSGGSVGAGVSSAVGDESELYDASLCDESSMPSTPATAASAIVAGVLSRTASKTDATPQRKTRKRNRATPNKGTEAYERLRNSNNVSVSKCRQKKRFEQRVIAEAYSKLEAENARLRKMIEDLATERRIQGDIYASLTGHVVPSVL* # ORIGINAL: g8719.t1 original gene structure, not modified by PASA NODE_2918_length_4738_cov_43.5248 AUGUSTUS gene 339 3609 . - . ID=g8719;Name=g8719.t1 NODE_2918_length_4738_cov_43.5248 AUGUSTUS mRNA 339 3609 . - . ID=g8719.t1;Parent=g8719;Name=g8719.t1 NODE_2918_length_4738_cov_43.5248 AUGUSTUS exon 2031 3609 . - . ID=g8719.t1.exon1;Parent=g8719.t1 NODE_2918_length_4738_cov_43.5248 AUGUSTUS CDS 2031 3609 . - 0 ID=cds.g8719.t1;Parent=g8719.t1 NODE_2918_length_4738_cov_43.5248 AUGUSTUS exon 339 1661 . - . ID=g8719.t1.exon2;Parent=g8719.t1 NODE_2918_length_4738_cov_43.5248 AUGUSTUS CDS 339 1661 . - 2 ID=cds.g8719.t1;Parent=g8719.t1 #PROT g8719.t1 g8719 MMRLSLKLPRRGASTKSPSDAASQLTAESNSSPNDDIRDSSQAQSLLQFTTSASQALHPHDGDVVDSSVTVDRSSAVCDDVHACVERASSRATVIVWDLHSDNSMLKCSPVSAADPQVLVAPLNETGHTLASDANVDHAEDATSAPFVTGTLSVANSQDAFAEESLQPVCPVCGAQLGQIASALMRDEHVNACLDGIPAIASAVTTDTQHASSIPHAADVGFGDLCFCTLCGHDITAYDEYRRQRHANNCADRMFGVELVPTSTAKMSEMALGLDGGTKVIRAAAEYTCALCGCSIANRKSRYVHLKACAKRMGVRTDALLAMMRDESVEISGADSVETITQRPRPMATAVGAARTAGANPDEAHHVTSDQTIRQGTVEEDESEGATVRNANAMSCMEIAPQRQLQQPQQQQHQQQRKQPNQSTKKRARRRKDEDLELAIALSKSLVPKNNESESGPCGGALCGDAFCVGSNCSAHVTGGGRGRRKRRAIDEIVPPLLTRSDEEHMRDVMARAAQMLLSSNTQLSAGRDGLWAVSAFSPSKPRDIFYVNGLLPKHMPCLEAATDAAGSSSPRNTAEKTGAECARDDHEDSAESLPCTQQFVELLADIGTDDDESFDSQDSRESALSAVNKSMVDEDGCIDADLSVVSGDQFGSVDSHSAPHGCSYGFGFASSLSTAVTVSPRRPKSLRGGAADDDAALAESTPARNSAVWRSPAMGDAVMFSIETGDVRVKDDAYVEASWDSDNFIGAFDEMDDAEQPSDRRSSFMGVDADGTIVLFSDTEDDDSGEAEIGGDSGSACAASAGPTRGGVGGGVHPQLPASNAASNAACLVRGDAPSREMMQSKGIDVETHVIKKKEPIVIDLGDSQEDPPDAPAAPVAARDCATVTLKSLADDATAAALTAHQAKAEAPSQGGSRAHALDDSASHRESRARQSQSPFIVRESVSVFASPQGFGSRAYGLDDSAVFNQ # PASA_UPDATE: g8720.t1, single gene model update, valid-1, status:[pasa:asmbl_5233,status:12], valid-1 NODE_2918_length_4738_cov_43.5248 . gene 4264 4677 . + . ID=g8720;Name=g8720.t1 NODE_2918_length_4738_cov_43.5248 . mRNA 4264 4677 . + . ID=g8720.t1;Parent=g8720;Name=g8720.t1 NODE_2918_length_4738_cov_43.5248 . five_prime_UTR 4264 4308 . + . ID=g8720.t1.utr5p1;Parent=g8720.t1 NODE_2918_length_4738_cov_43.5248 . exon 4264 4385 . + . ID=g8720.t1.exon1;Parent=g8720.t1 NODE_2918_length_4738_cov_43.5248 . CDS 4309 4385 . + 0 ID=cds.g8720.t1;Parent=g8720.t1 NODE_2918_length_4738_cov_43.5248 . exon 4485 4677 . + . ID=g8720.t1.exon2;Parent=g8720.t1 NODE_2918_length_4738_cov_43.5248 . CDS 4485 4677 . + 1 ID=cds.g8720.t1;Parent=g8720.t1 #PROT g8720.t1 g8720 MAATRAVIIALAVIACIAASADALARINLKKNEESSFHRFTTRKFNMLGADDIPLSDFENVSQTTAIHYSLNVSKAESTVHALEHNMIA* # ORIGINAL: g5627.t1 original gene structure, not modified by PASA NODE_2861_length_4915_cov_41.6789 AUGUSTUS gene 3173 4723 . + . ID=g5627;Name=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS mRNA 3173 4723 . + . ID=g5627.t1;Parent=g5627;Name=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS exon 3173 3286 . + . ID=g5627.t1.exon1;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS CDS 3173 3286 . + 0 ID=cds.g5627.t1;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS exon 3540 3611 . + . ID=g5627.t1.exon2;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS CDS 3540 3611 . + 0 ID=cds.g5627.t1;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS exon 3880 4454 . + . ID=g5627.t1.exon3;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS CDS 3880 4454 . + 0 ID=cds.g5627.t1;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS exon 4602 4723 . + . ID=g5627.t1.exon4;Parent=g5627.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS CDS 4602 4723 . + 1 ID=cds.g5627.t1;Parent=g5627.t1 #PROT g5627.t1 g5627 MPGDIGSLVFVSADGDAVVSRFDITAQETTIGRGDTFKIAHKRVGREHVVVRVEGNDVAVKPVHVNPTFVFGSGGAEVRLPKDEWYSLRPNEVVAIAPNSEIAFRVEPSLAKAVVANSKTNASATAGNSKESAPATATARAHGDEQSDVHVPSPGGGGDLAVSDTVPLVKRKLPAWMTGGSASAGPQRAPTTATAKTKPPPAKKETKAETKVSSAGAGGPSAVPSAAPSVVPASGVARAAGKAPRKRSRKTKDSDDEDDGEDDEYESDFIDDRDADEIAAEARGRSRRKRTKRE # PASA_UPDATE: g5626.t1, single gene model update, valid-1, status:[pasa:asmbl_5139,status:3], valid-1 NODE_2861_length_4915_cov_41.6789 . gene 1047 2601 . + . ID=g5626;Name=g5626.t1 NODE_2861_length_4915_cov_41.6789 . mRNA 1047 2601 . + . ID=g5626.t1;Parent=g5626;Name=g5626.t1 NODE_2861_length_4915_cov_41.6789 . five_prime_UTR 1047 1218 . + . ID=g5626.t1.utr5p1;Parent=g5626.t1 NODE_2861_length_4915_cov_41.6789 . exon 1047 2082 . + . ID=g5626.t1.exon1;Parent=g5626.t1 NODE_2861_length_4915_cov_41.6789 . CDS 1219 2082 . + 0 ID=cds.g5626.t1;Parent=g5626.t1 NODE_2861_length_4915_cov_41.6789 . exon 2448 2601 . + . ID=g5626.t1.exon2;Parent=g5626.t1 NODE_2861_length_4915_cov_41.6789 . CDS 2448 2552 . + 0 ID=cds.g5626.t1;Parent=g5626.t1 NODE_2861_length_4915_cov_41.6789 . three_prime_UTR 2553 2601 . + . ID=g5626.t1.utr3p1;Parent=g5626.t1 #PROT g5626.t1 g5626 MAVSREKESRSSSSSVAITRSNDGAGQQRPRHSSNKSKKPAAGPSANDVSLIPGTVPTPNEEVVTAAMLATQSDSISIAIDEMAAQRAAIDEAIEEIFVDEEANGHDEPLPPGQPTATAAAAATVVEIRPPLTKKERKALKKKRRRASLEARARSEGATGTAATTPREAWAADGVDVNGKSETRISMRRRRTNAQNSDANSGGRSPVLVSALLYQPVVTNKESFARDAFVSESTTVSWLNAALGLLLSSALLAHARERLLALIFASCALVIVIVTAIVYYHHLGELLKARTIIPGRMLVALVCVVFFIVGVVAAALYFAYPQ* # ORIGINAL: g5625.t1 original gene structure, not modified by PASA NODE_2861_length_4915_cov_41.6789 AUGUSTUS gene 272 776 . - . ID=g5625;Name=g5625.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS mRNA 272 776 . - . ID=g5625.t1;Parent=g5625;Name=g5625.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS exon 272 776 . - . ID=g5625.t1.exon1;Parent=g5625.t1 NODE_2861_length_4915_cov_41.6789 AUGUSTUS CDS 272 776 . - 0 ID=cds.g5625.t1;Parent=g5625.t1 #PROT g5625.t1 g5625 MAPIAWAIAGGAVGYAVARAGLHLGDVASLLRLGTAWDCTCISFVGTCVAAGVVALRVISKRKRKISVDGADAMASLYDVQSTQRALLNITPPSSHWMNWGLWNASRLCSDACVDASCESEDGTSAGALHDRATCKNVKNGMSFMDACEGLARLLAQKACIGRQDDVL # PASA_UPDATE: g11479.t1, single gene model update, valid-1, status:[pasa:asmbl_4476,status:12], valid-1 NODE_2514_length_6041_cov_44.1835 . gene 839 4761 . - . ID=g11479;Name=g11479.t1 NODE_2514_length_6041_cov_44.1835 . mRNA 839 4761 . - . ID=g11479.t1;Parent=g11479;Name=g11479.t1 NODE_2514_length_6041_cov_44.1835 . exon 4651 4761 . - . ID=g11479.t1.exon1;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . CDS 4651 4761 . - 0 ID=cds.g11479.t1;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . exon 4198 4263 . - . ID=g11479.t1.exon2;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . CDS 4198 4263 . - 0 ID=cds.g11479.t1;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . exon 1725 4040 . - . ID=g11479.t1.exon3;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . CDS 1725 4040 . - 0 ID=cds.g11479.t1;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . exon 839 1537 . - . ID=g11479.t1.exon4;Parent=g11479.t1 NODE_2514_length_6041_cov_44.1835 . CDS 839 1537 . - 0 ID=cds.g11479.t1;Parent=g11479.t1 #PROT g11479.t1 g11479 MQINLVQEEEAAELHAAMDDLVRLERQFVRYLQKSRRALSCVKLDDPSSPGVGDVFLQFMDRLGQSEAACSRIDVAVRRLPEAERRAFDHLRVIPAQRIAAYVRTLRLVYDGPIPEGHRAALARAVTRLMSIPGIRRQNATAKVTAFPFPVDSPLSSRDASDEDIDSADDDATTDALASDTSTSNSDDERQAAPVSAPPSKSAASSSPSAKHLIPQISIEHAEDDHPRDGSTGRIDTAATREKRDGGEASDATGEVDDAGSPVGAHQADGLAEAQTPQSPSPGARRGKRVSWGAETKSFVPQLHGDSTPEENSAGHSASSHPQAPQMPSSSFSHHVIANDDVAVANSTRTSAAAETATNTTAPAVPLSPHDPRLVHEEGIDGVGPLLTSPGAAVGAKDGKDTASSPVRRAEALNIQRRLAALASAQQAATAGSTAEASATSRRRYSLDLGGLAATAASGGVGLGGVHPASALSSAAEFQRSGDLNQRVIALLQRNADVEEQLGCAESKARQLEERLAVVDREHIGRVEAMGHFHENRFAIINRDADARVAAMRAECEAQLQQAKRQYEGRATSQAREMEKRLAAQAEEAQQQLESAERVFEERVAVLNEDCESRVEAMRAEMNARVAAAEEGRDTAEDRHRAMYEDAVKQLRADSDAQVASMKKSHEAAVEHLVTRAKKDADDAFSAQQAHFDATVAALRSKQAALEKRALTAERQLVTVARQKDEVAAELRDTLGRRDTGTAELEDMRGRIDALRTRCRETDAENRRLRAELQRVSAGQRNGYAIRHLEKKAYYASSSPRDQTYDEALALQEERCNLLGRRLVESRDRIQELVDALHLAQEDAETSRTRAANREAAAMKARRRMEMLEKSVGRFKSALGLLLEYAHEALVPEEEKGRFFAWFDSLLEGAASDGSFVDGIVRDALDELHDMRSQRQDEGDCHGGGAPRDGGAGQRAPRHAWDAGDGLPWEDGDGERCRGEYGDGDACDPDAPDTHAQSRAHRTVAAHSQNDIDSHDHGGGDGTIPNEYDEYDEYDEYDEYDEYAECADANGWDASGQDTGVAQ* # ORIGINAL: g11480.t1 original gene structure, not modified by PASA NODE_2514_length_6041_cov_44.1835 AUGUSTUS gene 5678 5920 . - . ID=g11480;Name=g11480.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS mRNA 5678 5920 . - . ID=g11480.t1;Parent=g11480;Name=g11480.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS exon 5678 5920 . - . ID=g11480.t1.exon1;Parent=g11480.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS CDS 5678 5920 . - 0 ID=cds.g11480.t1;Parent=g11480.t1 #PROT g11480.t1 g11480 MSCVAGGRQVPPTERVTVTGRRWEEWCCSLALNLFERVGLSVEWMARVPYLCQGDLFQPYYKLEDAVFVLRPKEDFALGR* # ORIGINAL: g11478.t1 original gene structure, not modified by PASA NODE_2514_length_6041_cov_44.1835 AUGUSTUS gene 158 391 . - . ID=g11478;Name=g11478.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS mRNA 158 391 . - . ID=g11478.t1;Parent=g11478;Name=g11478.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS exon 158 391 . - . ID=g11478.t1.exon1;Parent=g11478.t1 NODE_2514_length_6041_cov_44.1835 AUGUSTUS CDS 158 391 . - 0 ID=cds.g11478.t1;Parent=g11478.t1 #PROT g11478.t1 g11478 MAFGATPASASDVLTSVGAALSGIVPPEHAVTVYSLLFTVLLLVVAVAVRAVFAPHIRGIEKFVFVWLAWDGFIHLSL # ORIGINAL: g2585.t1 original gene structure, not modified by PASA NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS gene 8923 9348 . + . ID=g2585;Name=g2585.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS mRNA 8923 9348 . + . ID=g2585.t1;Parent=g2585;Name=g2585.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 8923 9348 . + . ID=g2585.t1.exon1;Parent=g2585.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 8923 9348 . + 0 ID=cds.g2585.t1;Parent=g2585.t1 #PROT g2585.t1 g2585 MSIRVGRRQYNSSGGFVDPAFPGFEPIHVLTKSTAYGSLGPYELKNELGQIMENVYQFSRLYRRVPASCQKYSRYDQTVTWDWPAEQHVDAGNILPAYWRWREAGMNNKYFVRYPVGFQGRGTQVVGAIAEKTDSPVILDY* # ORIGINAL: g2583.t1 original gene structure, not modified by PASA NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS gene 3128 4018 . - . ID=g2583;Name=g2583.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS mRNA 3128 4018 . - . ID=g2583.t1;Parent=g2583;Name=g2583.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 3706 4018 . - . ID=g2583.t1.exon1;Parent=g2583.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 3706 4018 . - 0 ID=cds.g2583.t1;Parent=g2583.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 3128 3453 . - . ID=g2583.t1.exon2;Parent=g2583.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 3128 3453 . - 2 ID=cds.g2583.t1;Parent=g2583.t1 #PROT g2583.t1 g2583 MIIWCRGITDVSVLGRVNTLTLYGCTAVTDVSALGGVRHLDLGGCWRVEDVSALGQCVDLNLYGCWRIRDVSALGTVCHLVLNANRWIRDIVPLKSVKRLYMTRLLSALGDWLDCGIVVALLFINAIIGYFEKAKAESALDALKETLALRSRVIRNGQLIEMNSADIVPGDIIAVRLGDIVPADATLLGIGPTGEIAEVPLQIDQSAENRFQ* # PASA_UPDATE: g2586.t1, single gene model update, valid-1, status:[pasa:asmbl_121,status:12],[pasa:asmbl_122,status:12], valid-1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . gene 10109 11648 . - . ID=g2586;Name=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . mRNA 10109 11648 . - . ID=g2586.t1;Parent=g2586;Name=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . exon 11115 11648 . - . ID=g2586.t1.exon1;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . CDS 11115 11648 . - 0 ID=cds.g2586.t1;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . exon 10431 10841 . - . ID=g2586.t1.exon2;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . CDS 10431 10841 . - 0 ID=cds.g2586.t1;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . exon 10109 10349 . - . ID=g2586.t1.exon3;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . CDS 10296 10349 . - 0 ID=cds.g2586.t1;Parent=g2586.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant . three_prime_UTR 10109 10295 . - . ID=g2586.t1.utr3p1;Parent=g2586.t1 #PROT g2586.t1 g2586 MTNEIAQKGARKRPTEELTAASRKKQKTTIDADVVETNKDATNEANDTEAASDNEEASGNEEASGNEAASGNEIAKGKEAAHRVEATNDNEATNGVEASNGDEAANEHSKSTPYAGIVPVRGATYKVMVEEQRRRSKKLHKTTGYVFVVASNSKKLTATVQWYEQGSKLRHNTKIPIAERFDNVRLQGDTLDFSHQWPADSDNKVDDGNDNHKQSRALVPARQAKSAGKAGKAGKAGTGKARTTRKAGTVRKAGKAGKAGTAGKRSARGTVVELALVDKLERCMDMMSRSQRNANAQVARMCEALDNNARMLLTIVENRGIVQTSRLPQIEQ* # ORIGINAL: g2587.t1 original gene structure, not modified by PASA NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS gene 12369 13736 . - . ID=g2587;Name=g2587.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS mRNA 12369 13736 . - . ID=g2587.t1;Parent=g2587;Name=g2587.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 12369 13736 . - . ID=g2587.t1.exon1;Parent=g2587.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 12369 13736 . - 0 ID=cds.g2587.t1;Parent=g2587.t1 #PROT g2587.t1 g2587 MNNNPIFHGHNEQEVAELLAFFNHCASHATSQTGSDIQTYHSAQTDARDQTEACDDQTEWCNQTEACDDQTEACDDQSEACDDQTEARDDQATTWDELTEALGEQIELWDEQTYQYDEQTTGKSDASACHEQSDACHDQTGATDNQTIATDNQTIATDNQTIATDNQTIASHAYDEKTIATKWLQTHAWIGMRWLVDSDWLHTKPWRVPDQIAAKDAELAKYSNDKLLRTLSHTFCIPVLSKIHEDQLSKPAYTYVVKGKYIGKPVQIKENDIYTSIDSLDAAALYLTNKVYDESDEHVISFILCPSTTIMEYLVIIFRCMIVARQALSGSITERQFHACYLSEHMIILKMADGKTVVLDARTNLIFRPAGVTYIFDTDKTDCQFPNNFAMSHFWVRATITNRRPKNPRTKKPNTTKRGRQTATQGDDTVPKVAVRKAVKARIRSRRRFGSSDDQ* # ORIGINAL: g2584.t1 original gene structure, not modified by PASA NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS gene 7943 8707 . - . ID=g2584;Name=g2584.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS mRNA 7943 8707 . - . ID=g2584.t1;Parent=g2584;Name=g2584.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 7943 8707 . - . ID=g2584.t1.exon1;Parent=g2584.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 7943 8707 . - 0 ID=cds.g2584.t1;Parent=g2584.t1 #PROT g2584.t1 g2584 MKPIIVTVNGVRRFKRAGDNTFKHETKTDAAFVVALLLYCLVDPYANEKWKIIKLHSKHETPYAAAFAKKFSGQENLYKMCCDGLLLSCSQRSPSTIDDVLNCLRGENESASFEDISSKLATLTVSAQKRKQRSRNEEQFGQWIEAVFAKRVEKCNRWQSRGLNYAFFQLVSNRNIEFGCAFTLSNIGENDFGGTIVFFNVEVPEIDNKSEIDLETSNGGDVFETSLFVPYCQRTQFEQLLVARLTLVLASFLD* # ORIGINAL: g2582.t1 original gene structure, not modified by PASA NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS gene 851 1183 . + . ID=g2582;Name=g2582.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS mRNA 851 1183 . + . ID=g2582.t1;Parent=g2582;Name=g2582.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS exon 851 1183 . + . ID=g2582.t1.exon1;Parent=g2582.t1 NODE_1033_length_14536_cov_22.9929_potentialcontaminant AUGUSTUS CDS 851 1183 . + 0 ID=cds.g2582.t1;Parent=g2582.t1 #PROT g2582.t1 g2582 MTAEVVHAIDLADPIVEFLDQQSDAAILLGYNTGSTNNNWFDAFLSCMDDEHGLTADDAISVTSTDASIIAIEGYWSMNSYQQDKNKSRLDRMCEIDAAINQWLQVSTNE* # PASA_UPDATE: g1665.t1, single gene model update, valid-1, status:[pasa:asmbl_6394,status:12], valid-1 NODE_3672_length_2988_cov_35.3728 . gene 678 2919 . - . ID=g1665;Name=g1665.t1 NODE_3672_length_2988_cov_35.3728 . mRNA 678 2919 . - . ID=g1665.t1;Parent=g1665;Name=g1665.t1 NODE_3672_length_2988_cov_35.3728 . five_prime_UTR 2918 2919 . - . ID=g1665.t1.utr5p1;Parent=g1665.t1 NODE_3672_length_2988_cov_35.3728 . exon 2350 2919 . - . ID=g1665.t1.exon1;Parent=g1665.t1 NODE_3672_length_2988_cov_35.3728 . CDS 2350 2917 . - 0 ID=cds.g1665.t1;Parent=g1665.t1;5_prime_partial=true NODE_3672_length_2988_cov_35.3728 . exon 678 2176 . - . ID=g1665.t1.exon2;Parent=g1665.t1 NODE_3672_length_2988_cov_35.3728 . CDS 1398 2176 . - 2 ID=cds.g1665.t1;Parent=g1665.t1 NODE_3672_length_2988_cov_35.3728 . three_prime_UTR 678 1397 . - . ID=g1665.t1.utr3p1;Parent=g1665.t1 #PROT g1665.t1 g1665 TEADADDAYFEPSPLSRASSRTSGGFRAAELPGDLNRTIFSDDDDSDEANRDGVDESRPAAPPIRPTPRGNSSESLLGKSVSVRVGAVSASPTAGVQRQDSRVGKQHLDSVMEAPVPGKSTAPLTATTADILAKDADPLPTTATPAIAGSSTAPAPAVAVASAVVQPSAAASSAAPPAQAAKPRPFVSSVMIIGTCIEGCVLVVADPQPSEVAALLGTDTSSGIASAAGASVPRIVRRWVRMQPDNRSIIVGGDAHMYTLAKEDVSSRIVVQWKPVDAPAHLPWATSAPTQPIRAAIQTTALAPATAAAVAAAIAVSPLPARATLASSGNSSGTASPSASSASGLAVGGKLVPGGRLNITGIPAHIDAADVRWFRVDHPDRSKCTFLATGGEYTLTPADANYCVRVDCPRVSLARAGAGGGGNGDARKDVMSVWTDMVRAGPLPATAV* # ORIGINAL: g1664.t1 original gene structure, not modified by PASA NODE_3672_length_2988_cov_35.3728 AUGUSTUS gene 59 196 . + . ID=g1664;Name=g1664.t1 NODE_3672_length_2988_cov_35.3728 AUGUSTUS mRNA 59 196 . + . ID=g1664.t1;Parent=g1664;Name=g1664.t1 NODE_3672_length_2988_cov_35.3728 AUGUSTUS exon 59 196 . + . ID=g1664.t1.exon1;Parent=g1664.t1 NODE_3672_length_2988_cov_35.3728 AUGUSTUS CDS 59 196 . + 0 ID=cds.g1664.t1;Parent=g1664.t1 #PROT g1664.t1 g1664 DQILLELGAAPYYERQADGADEAAKPADGAEEDKFIVVHPNYVIE* # PASA_UPDATE: g4504.t1, single gene model update, valid-1, status:[pasa:asmbl_9789,status:3], valid-1 NODE_874_length_16453_cov_44.2476 . gene 10754 12211 . + . ID=g4504;Name=g4504.t1 NODE_874_length_16453_cov_44.2476 . mRNA 10754 12211 . + . ID=g4504.t1;Parent=g4504;Name=g4504.t1 NODE_874_length_16453_cov_44.2476 . five_prime_UTR 10754 10845 . + . ID=g4504.t1.utr5p1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 10754 10868 . + . ID=g4504.t1.exon1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 10846 10868 . + 0 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 10978 11140 . + . ID=g4504.t1.exon2;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 10978 11140 . + 1 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 11235 11318 . + . ID=g4504.t1.exon3;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 11235 11318 . + 0 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 11482 11657 . + . ID=g4504.t1.exon4;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 11482 11657 . + 0 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 11770 11890 . + . ID=g4504.t1.exon5;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 11770 11890 . + 1 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . exon 11991 12211 . + . ID=g4504.t1.exon6;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . CDS 11991 12077 . + 0 ID=cds.g4504.t1;Parent=g4504.t1 NODE_874_length_16453_cov_44.2476 . three_prime_UTR 12078 12211 . + . ID=g4504.t1.utr3p1;Parent=g4504.t1 #PROT g4504.t1 g4504 MAETGTPKKELIPLRVMFVHSGNARTHADGIHMPISEYIMRTFIGHVEPMDTQNHDECLQRQLHAIEIFKPQVVVGHSFGAALVMEMLQKGQWKGPTVLLCPAVHPGHDNLSLPSTVPIIVVQGEEDAIVSPLVAEQIAKTNSDNPALRLLEIEDDHKLLKLLDESSVISFPSIILMSIEKTAEIAGYEGPDLLSFIAEAQVKFEGQHDSSSSCVVM* # ORIGINAL: g4501.t1 original gene structure, not modified by PASA NODE_874_length_16453_cov_44.2476 AUGUSTUS gene 333 3017 . - . ID=g4501;Name=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS mRNA 333 3017 . - . ID=g4501.t1;Parent=g4501;Name=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS exon 2963 3017 . - . ID=g4501.t1.exon1;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS CDS 2963 3017 . - 0 ID=cds.g4501.t1;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS exon 2290 2529 . - . ID=g4501.t1.exon2;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS CDS 2290 2529 . - 2 ID=cds.g4501.t1;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS exon 894 1986 . - . ID=g4501.t1.exon3;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS CDS 894 1986 . - 2 ID=cds.g4501.t1;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS exon 333 688 . - . ID=g4501.t1.exon4;Parent=g4501.t1 NODE_874_length_16453_cov_44.2476 AUGUSTUS CDS 333 688 . - 1 ID=cds.g4501.t1;Parent=g4501.t1 #PROT g4501.t1 g4501 MDPRHTARLSLDLKREYEGESSQGRSVEKSDPGGVKGLSLFKRSERSGSQKSASSSHTRSGSEDGAAGGSSTSRNRFSFFKREKRSNGTASDNDSDSEGKPKTKPPTRKRVRRPRSRLNPSLIDVLTDSEALDYYLQFMEKESATVYLQFWMNAEAFRQSLGVQDPPTAADAVPASGAAQANATPLPSREDVKWALTLYDTYISLRSADPILMDEAIRKRIEARICDARGPGADCFVEAQQFVLDVMDKEHFGAFKDSRMFFKFVLSLVTSKRADLRDYLLDDTALFYFREFVEREKGALPLLQFWLTAENFRNHVFSTTPRQSAASDSTTNQQQQQQQQQQQLQHQHQHQQHPFHSDAPKSPSVARLSAEMHGPPSLTRSASAPISPRSPKLRPEAAHNLEDAMQLYNRYVSLQAPEPIGIDERVRMQCEDDMCNTEGPLATSFDAAQDHCLDVLERKLFPRFRESSLFVSYMSELVDRVERADTPSQPPPDDAKGDVKSDAATVTTGQTSRARGESDAYAKSESAAWSERGGATESGNDDDATLWRAQPKATLSSGLVNEWGMYVREADVDPLSEPTKK # PASA_UPDATE: g4502.t1, single gene model update, valid-1, status:[pasa:asmbl_9788,status:3], valid-1 NODE_874_length_16453_cov_44.2476 . gene 3750 6359 . + . ID=g4502;Name=g4502.t1 NODE_874_length_16453_cov_44.2476 . mRNA 3750 6359 . + . ID=g4502.t1;Parent=g4502;Name=g4502.t1 NODE_874_length_16453_cov_44.2476 . five_prime_UTR 3750 3889 . + . ID=g4502.t1.utr5p1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 3750 3955 . + . ID=g4502.t1.exon1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 3890 3955 . + 0 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 4404 4627 . + . ID=g4502.t1.exon2;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 4404 4627 . + 0 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 4829 5202 . + . ID=g4502.t1.exon3;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 4829 5202 . + 1 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 5532 5689 . + . ID=g4502.t1.exon4;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 5532 5689 . + 2 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 5931 6002 . + . ID=g4502.t1.exon5;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 5931 6002 . + 0 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . exon 6173 6359 . + . ID=g4502.t1.exon6;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . CDS 6173 6283 . + 0 ID=cds.g4502.t1;Parent=g4502.t1 NODE_874_length_16453_cov_44.2476 . three_prime_UTR 6284 6359 . + . ID=g4502.t1.utr3p1;Parent=g4502.t1 #PROT g4502.t1 g4502 MADEQRIAKKLEEVNTAMKALQDKIGAFETSVKDMSKKQGACVKDMGDIKKQLRALSDDVKSAKSVDAAAGKVYAAAIIEKSAMLRKAELLFPQKNSMLLRLALGDVNVTLPKMGDRFKYKTEYENFKMKMTIVTIALSFLNLFVLHYRLMDAVFNVLLVWHYCTITLREHILLANGSRIRGWWLTHHYLSITLSAVFLIWPDGLSYRAFRNQFLVFSIYLGCVQLLQFRYQIGRLYTLRALGKTDSMEIISDTAGGSNSSSLNLLLPFLAFGYLFQFYNSYTLFKIATDPALSSPWEVAALGALFLVLAIGNSYTTFITVRNKASRDHKKKSS* # PASA_UPDATE: g4505.t1, single gene model update, valid-1, status:[pasa:asmbl_9792,status:12], valid-1 NODE_874_length_16453_cov_44.2476 . gene 12672 16203 . + . ID=g4505;Name=g4505.t1 NODE_874_length_16453_cov_44.2476 . mRNA 12672 16203 . + . ID=g4505.t1;Parent=g4505;Name=g4505.t1 NODE_874_length_16453_cov_44.2476 . five_prime_UTR 12672 13040 . + . ID=g4505.t1.utr5p1;Parent=g4505.t1 NODE_874_length_16453_cov_44.2476 . exon 12672 15479 . + . ID=g4505.t1.exon1;Parent=g4505.t1 NODE_874_length_16453_cov_44.2476 . CDS 13041 15479 . + 0 ID=cds.g4505.t1;Parent=g4505.t1 NODE_874_length_16453_cov_44.2476 . exon 15688 16203 . + . ID=g4505.t1.exon2;Parent=g4505.t1 NODE_874_length_16453_cov_44.2476 . CDS 15688 16203 . + 0 ID=cds.g4505.t1;Parent=g4505.t1 #PROT g4505.t1 g4505 MATLFRQRSSVRSARQGNASPSTMSFTAPFIAMVWILLADSTHGDLVAGLDPPSIYVSYTPASRVFINEMHIANAGQDIDEGIEIVGPAGTDITGWTVTFYSSSGGLYASSTVASPNNFDPVVIPDQQNGFGTYFFTKWLGSSDVLRTNGGVALSDANGTLIQFIGFTDGSFLTPIKPTTGPANGVSSDIIPLRVNSNAAVGSSMQLIGTGYKVSDFTWAYGSKNTYNAVNANQTLKFPSGFPWPGCNIATISNAIFTISFIGDTVTGACVPGYASYGTDGLFSRPQVTCRNDATYGNASAVSNPCVRVCPGETKFNATWPLVKPGETSQGTCTKGFLPDDNVTPTVALTRTCVDGNFSVPTGTPCLANSDCDVRRYYKMARYPRAKTGTNVTGECLPGSATLNGQAPVYSCVSGGTLTETVTNPCQPLVFFSELRAYQYPNPTGPPDDVIEVVGPAGIDLTGWQFVQHTKSGQAQLFKTITKGSASNSNDNIIQDQHGGFGTLAFKRVFCPTDAMAMVNSDSDVFPIALLPPPLADGMQYAIDAVSFNAELSLTTGPASGIRSRRVSGFTNLTKMDGWGQKGYTIKLGGVGVIPSQLNWTTSLTPESIGVFNGEHTGFETTGDTAASYLATRMCTAVTEFDATYPAALSGMYSIGTCSTGYILPTDGYQLTRRYCNSTLQLESPNVTCVKGCAATTKGNALFSSVLNGATSTGTCLPGYTSAQAPILPCGSNGFAPNPSVNCTFSGCVGAYKGAIFATKVNVGSVAVGSCPLGMSTGGPPPNATCGASGFVGDVRNPCSKSEVFINEYSYVGGAYEGMEIMGPVGTNLSAWRVELYYSDVRPSHCPGTPVSGKAGTIVLGTVATTGVVIPARISGTRLSPLFFPFKIDPDEPLAIALVNPDGYVTHLFAHETTTDVIIGSFGSAAGMVAKANSMVMPNGRSSAKTLQLKGVGRFAEDFTWEGKLSGCCFSSVCFGLFASYTAS* # PASA_UPDATE: g4503.t1, single gene model update, valid-1, status:[pasa:asmbl_9791,status:12], valid-1 NODE_874_length_16453_cov_44.2476 . gene 6411 8796 . - . ID=g4503;Name=g4503.t1 NODE_874_length_16453_cov_44.2476 . mRNA 6411 8796 . - . ID=g4503.t1;Parent=g4503;Name=g4503.t1 NODE_874_length_16453_cov_44.2476 . exon 8698 8796 . - . ID=g4503.t1.exon1;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . CDS 8698 8796 . - 0 ID=cds.g4503.t1;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . exon 8226 8423 . - . ID=g4503.t1.exon2;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . CDS 8226 8423 . - 0 ID=cds.g4503.t1;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . exon 7644 7778 . - . ID=g4503.t1.exon3;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . CDS 7644 7778 . - 0 ID=cds.g4503.t1;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . exon 6411 7239 . - . ID=g4503.t1.exon4;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . CDS 7090 7239 . - 0 ID=cds.g4503.t1;Parent=g4503.t1 NODE_874_length_16453_cov_44.2476 . three_prime_UTR 6411 7089 . - . ID=g4503.t1.utr3p1;Parent=g4503.t1 #PROT g4503.t1 g4503 MSVPIRRKLVVVGDGACGKTCLLIVFSKDTFPEVYVPTVFENYVADIEIDGKEVELALWDTAGQEDYDRLRPLSYPDTNVVLMCFAIDSPDSLENIKEKWVPEVHHFCPNIPFVLVGCKKDLRNDPNTIKELAKMKQAPVTEQEGLKNAEWVQATKYIECSAKTKENVREVFETATRAALMVKNKKKGKCLIL* # ORIGINAL: g3050.t1 original gene structure, not modified by PASA NODE_5160_length_990_cov_28.2634_potentialcontaminant AUGUSTUS gene 1 272 . - . ID=g3050;Name=g3050.t1 NODE_5160_length_990_cov_28.2634_potentialcontaminant AUGUSTUS mRNA 1 272 . - . ID=g3050.t1;Parent=g3050;Name=g3050.t1 NODE_5160_length_990_cov_28.2634_potentialcontaminant AUGUSTUS exon 1 272 . - . ID=g3050.t1.exon1;Parent=g3050.t1 NODE_5160_length_990_cov_28.2634_potentialcontaminant AUGUSTUS CDS 1 272 . - 0 ID=cds.g3050.t1;Parent=g3050.t1 #PROT g3050.t1 g3050 MIATYPNGLPVPTDANHATVTVGPGATYPGGSKVVTYPGGIPAQTDASGQPITYTEAAPATYPNGQPVPTDANHATVTVGPGATYPGGSK # PASA_UPDATE: g3095.t1, single gene model update, valid-1, status:[pasa:asmbl_7683,status:12], valid-1 NODE_4872_length_1177_cov_102.498_potentialcontaminant . gene 26 1083 . - . ID=g3095;Name=g3095.t1 NODE_4872_length_1177_cov_102.498_potentialcontaminant . mRNA 26 1083 . - . ID=g3095.t1;Parent=g3095;Name=g3095.t1 NODE_4872_length_1177_cov_102.498_potentialcontaminant . exon 26 1083 . - . ID=g3095.t1.exon1;Parent=g3095.t1 NODE_4872_length_1177_cov_102.498_potentialcontaminant . CDS 26 1083 . - 0 ID=cds.g3095.t1;Parent=g3095.t1;5_prime_partial=true;3_prime_partial=true #PROT g3095.t1 g3095 LLHEDEVKRGRATHCSNESIVAALNRHDWGTFEFIVRNRPEVYPDDVRGIDWYNRSGGFKSASREQLLVLLQEAPSFLASSSLSAASDAARSAIQLGDAALVLRLLPYVQKPAAIADTALYCSSESDEILNIVLEECKARNADNRQLTARLLRPAAETGSMDLLNKGLLCAPLPGDEMSYAGKSLLVDRAVREGHMPVALRLREMGAKCEEAFGSRDEIARFVNEDGAKVVVWSLVTCLRRGDYDAAEFVVPRLSDWELSYAAQFLLRCGAMDGLRWMKKEQLLAGSRCMELLDGPALRDHMLIPSDLVDKVPKFVPTCEAVEFVIMLMREEKIFQKTLVHEDPWEVRVAKA # ORIGINAL: g1568.t1 original gene structure, not modified by PASA NODE_922_length_15848_cov_40.1825 AUGUSTUS gene 454 6077 . + . ID=g1568;Name=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS mRNA 454 6077 . + . ID=g1568.t1;Parent=g1568;Name=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 454 520 . + . ID=g1568.t1.exon1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 454 520 . + 0 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 856 1180 . + . ID=g1568.t1.exon2;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 856 1180 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 1428 2243 . + . ID=g1568.t1.exon3;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 1428 2243 . + 1 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 2589 2758 . + . ID=g1568.t1.exon4;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 2589 2758 . + 1 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 2931 3218 . + . ID=g1568.t1.exon5;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 2931 3218 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 3353 3528 . + . ID=g1568.t1.exon6;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 3353 3528 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 3943 4069 . + . ID=g1568.t1.exon7;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 3943 4069 . + 0 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 4262 4416 . + . ID=g1568.t1.exon8;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 4262 4416 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 4581 4759 . + . ID=g1568.t1.exon9;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 4581 4759 . + 0 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 4864 4919 . + . ID=g1568.t1.exon10;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 4864 4919 . + 1 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 5063 5139 . + . ID=g1568.t1.exon11;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 5063 5139 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 5532 5592 . + . ID=g1568.t1.exon12;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 5532 5592 . + 0 ID=cds.g1568.t1;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS exon 5833 6077 . + . ID=g1568.t1.exon13;Parent=g1568.t1 NODE_922_length_15848_cov_40.1825 AUGUSTUS CDS 5833 6077 . + 2 ID=cds.g1568.t1;Parent=g1568.t1 #PROT g1568.t1 g1568 FKSTTERAAGAQLAIDMINNKTDGWWDSLLPNIRLDAVLNDTQCASDLALKSALFQANCGVAAVVGDACSASTATVQLLMRIQSIMQVSSSATAVTLADKTLYPFFARTAASDALQGDIIIKLCLAFGWKSIGIITSGDDYGNGVATQIINAAKTANVTVAAREPLIGANHKAVAASLAAKSVRIIVIAVSLRSDLQALFTQAIAAGLTSPRHVWVSADASASDAIYKDPSNNILPAMKTAMAGMLAVRTVPGYGALYNSFVALWASLSNAAYFDADNDRSTMNFYTPASFDAVVALAHALHNVTAAGLSPYNGAEVKKALLATAFNGTSGRIAFDANGDRTSAQYEIINLQDIFRRVGIYDPAMGVVTLVSAVQWPTNGTVAPIDGTCPLDCSANGNCDRNSGVCTCLDGYDGSACNHIAPKALSVGRTTGTVACGSTLFFSANPSPLALTLAMSVDSAVDVVQRKFTAALVTTPLSTVTLPPVGGNLTIIAQSLFDIAANATVTAGVVSARQSRVMVRATGAAPLEPQLIAVRNSGVACPASFVLTVDEVLPTESRSSTNLLPVAIAVPVGLVTLALAVFVLMHRRHANLEKEAFRWRISPDDVEFGAVVGQVCLGVMRGSQVAIKKLKVKVGGNSEEEAMWADSKKARGSSLLATRLRKRLSSFGSAILRQKTIQAQLQDDARRSFVDEIRTMCALRHPNIVLFMGACLAGDNQFLVMEYLSGGTLYEWYSSNAPFAWEERLSAATDTAKGMLYLHRASPPILHRDLKSPNLLMDEHRKIKVADFGLSQMKQRQGKANHDGVVGSVLWMAPEILGMTSPFNELCDVYSYGIVLSEIASRSYPYRDFMAQMNVHESVAAVAAVMQGVRPTIPDDTPAEFVALARQCVLVTPSERPTFDEILGRIEAMRGAK* # PASA_UPDATE: g1569.t1, single gene model update, valid-1, status:[pasa:asmbl_10004,status:3], valid-1 NODE_922_length_15848_cov_40.1825 . gene 6240 8672 . - . ID=g1569;Name=g1569.t1 NODE_922_length_15848_cov_40.1825 . mRNA 6240 8672 . - . ID=g1569.t1;Parent=g1569;Name=g1569.t1 NODE_922_length_15848_cov_40.1825 . five_prime_UTR 8400 8672 . - . ID=g1569.t1.utr5p1;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . exon 8183 8672 . - . ID=g1569.t1.exon1;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . CDS 8183 8399 . - 0 ID=cds.g1569.t1;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . exon 7852 7986 . - . ID=g1569.t1.exon2;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . CDS 7852 7986 . - 2 ID=cds.g1569.t1;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . exon 6240 7652 . - . ID=g1569.t1.exon3;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . CDS 6340 7652 . - 2 ID=cds.g1569.t1;Parent=g1569.t1 NODE_922_length_15848_cov_40.1825 . three_prime_UTR 6240 6339 . - . ID=g1569.t1.utr3p1;Parent=g1569.t1 #PROT g1569.t1 g1569 MGSTFGRPVTSRAKRTAADAGLDDSSEGAADDGDGWDAPAGHVRQRLRTTSAYIHQTLFVNGEGSDVTVCALNHEWRLHKVYLKQAGYFGSLFSGRWRETDDRTVNVEVLDSNVDKSALSAAFESLYCDDISLSLSNIVGVLAAATLLQIDGLVQLCAAQMAACMCAGTVSSFYEAGLAYGRDDVVDAAVTWLERHLCTNMPSDALRDIGTDLMALVVRSPRLLVIHVELDVYVVLRRWLYLRVCPAAVLQRGRNVVGDSAAFFRGRPAGGVSGAGDGRSTATAAPAFLDTEEGRPYLAAFRSLRMAHMVNDHRNIDVIARDNVIPPSWLDASYRSLWLLMLRGGWDTSAARDDFSREGLRCGRMLLGDAQLTWRWMGFSYGFDVLVTYHSASRMITLRRNTKALHGASPTTVCLQPRRKLIYRVSVGALDASELVDADHAPPAPPASTPPTTNISSNTSTTNNSNYNNPLTPTRTPGGLLSPNHAASPQLSSHASGGSVETGTVGEPLSYFKCTDVCEQQFSLNEEVVAITVDADAVFPLYVSLTMMFPRNPA* # PASA_UPDATE: g1571.t1, single gene model update, valid-1, status:[pasa:asmbl_10005,status:3], valid-1 NODE_922_length_15848_cov_40.1825 . gene 13156 15591 . - . ID=g1571;Name=g1571.t1 NODE_922_length_15848_cov_40.1825 . mRNA 13156 15591 . - . ID=g1571.t1;Parent=g1571;Name=g1571.t1 NODE_922_length_15848_cov_40.1825 . five_prime_UTR 15553 15591 . - . ID=g1571.t1.utr5p1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . exon 15289 15591 . - . ID=g1571.t1.exon1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . CDS 15289 15552 . - 0 ID=cds.g1571.t1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . exon 14523 15162 . - . ID=g1571.t1.exon2;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . CDS 14523 15162 . - 0 ID=cds.g1571.t1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . exon 13577 14364 . - . ID=g1571.t1.exon3;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . CDS 13577 14364 . - 2 ID=cds.g1571.t1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . exon 13156 13441 . - . ID=g1571.t1.exon4;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . CDS 13244 13441 . - 0 ID=cds.g1571.t1;Parent=g1571.t1 NODE_922_length_15848_cov_40.1825 . three_prime_UTR 13156 13243 . - . ID=g1571.t1.utr3p1;Parent=g1571.t1 #PROT g1571.t1 g1571 MPAGLLFRARAARAGTLGVRARAAHARTLMTDGPIDRSLAHVRGSRVHPRLLTGTIGSAFDAVVADHSVERALVSVHQGVWWTYGELKYNAELLASGLARMGYTRGDRLGVWLPNTHEYVLCQLACAKLGVVLVTVNPAYRAPELEHALNLVGCKGLVLKPRIKTSDYASILSTLIPNLDSLRATHLAAARVPSLRHVFVTGSETVAGTIAFDSVLAGSVDPALAASGARLSPSDVVNVQFTSGTTGLPKGAALTHSNILNNGYMTGQRMGLRAGDAVCIPVPLYHCLGLVLGNLAAMTNASTMVYPSEIFDAAAVLSALKKERCTAVLGVPTMFHALVAHPSFVRRGYPSLRTGIMAGSACPADLMARVIEEMGASELTICYGMTETSPVSFQTQPTDNRALRCETVGTIHPHVECKIVDRATGATVRRGEVGELYTRGYGVMRGYWNMPEQTAESIVDGWMRTGDLASIDDTEAGHCRIVGRSKDMIIRGGENIFPREIETVLARHGRVRDVAVVGVPDEKYGEQVCAWVHMDGVEGDEPHVLAAAREDVSRFCKEQMAHYKVPRYIVINEPFPMTVTGKVQKFKMRDRSVELLQGKHRHDHSTSHPHTAHGHTHHTHHMHTHETKR* # PASA_UPDATE: g1570.t1, single gene model update, valid-1, status:[pasa:asmbl_10006,status:3], valid-1 NODE_922_length_15848_cov_40.1825 . gene 9000 13157 . + . ID=g1570;Name=g1570.t1 NODE_922_length_15848_cov_40.1825 . mRNA 9000 13157 . + . ID=g1570.t1;Parent=g1570;Name=g1570.t1 NODE_922_length_15848_cov_40.1825 . five_prime_UTR 9000 9121 . + . ID=g1570.t1.utr5p1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 9000 9160 . + . ID=g1570.t1.exon1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 9122 9160 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 9419 9580 . + . ID=g1570.t1.exon2;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 9419 9580 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 9765 10551 . + . ID=g1570.t1.exon3;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 9765 10551 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 10747 10979 . + . ID=g1570.t1.exon4;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 10747 10979 . + 2 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 11123 11251 . + . ID=g1570.t1.exon5;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 11123 11251 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 11406 11513 . + . ID=g1570.t1.exon6;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 11406 11513 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 11620 11901 . + . ID=g1570.t1.exon7;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 11620 11901 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 12101 12307 . + . ID=g1570.t1.exon8;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 12101 12307 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 12446 12625 . + . ID=g1570.t1.exon9;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 12446 12625 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . exon 12824 13157 . + . ID=g1570.t1.exon10;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . CDS 12824 12985 . + 0 ID=cds.g1570.t1;Parent=g1570.t1 NODE_922_length_15848_cov_40.1825 . three_prime_UTR 12986 13157 . + . ID=g1570.t1.utr3p1;Parent=g1570.t1 #PROT g1570.t1 g1570 MPLTNKPKAKLVPAAAASKSNITKKSTLASVKDDKNRASRASFGTAPEDDERADALGDDAFDDQWLQPKTLLKPEDQLDLTEEQLKEDFTRILSANNPHAAQNIVRFSHKEQSYKLAPAVDQTAIHFELEGYMLHRGSDEAKRQLAANGVAAVGLQEVAVEGGAPADDDAADADGEGAHAGGGDVLASSGQRKEHVLRNQFNFSERACQTFNNPQRDRATSTEPPPRANFSATVNQWEIHDAYAEDQQRQAQLKDKKAAAVPKGPGMKEDEKKKKLTQVETQTEDVVHSGAMVRSAKIIERMVNQNTFDDISQDFKYWEDQSDEFRDSEGTLLPLWKFVYDKAKRKAVTSLCWNPQYHDFFAVGYGSYDFSKQGPGMICAFTLKNPSYPEYVFNTESGVMCLDFNRQHPSLLAVGLYDGSVAIYNVQEKTTKPMYQSTAKTGKHTDPVWQVCWQEDDIDKNLNFYSVSSDGRVTSWTLVKNELHHNDVIELRLEHGSSKDGAEEGAEGVETVAAAPSRVDAGVSTTEKGLAEDAGIFGLGCGTCFDFNRANDHLFIVGTEEGKIRKCSKDYSSQYLDSYNAHQMSVYSVKWNHFHSRVFISCSADWTVKVWDHTHATPILSFDLNNAVGDAAWAPYSSTVFAAATSDGKLHIYDLNENKHEPLCEQQVVRKAKLTHIAFNPHFPILIVGDDRGGVTALKLSPNLRKALKEPRVSPDDEFAKMEKLLNAHATEKPVDPAAAAAAAEAQRQQLESQKANEDADK* # ORIGINAL: g13735.t1 original gene structure, not modified by PASA NODE_1985_length_8199_cov_35.4975 AUGUSTUS gene 3828 7889 . - . ID=g13735;Name=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS mRNA 3828 7889 . - . ID=g13735.t1;Parent=g13735;Name=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS exon 6824 7889 . - . ID=g13735.t1.exon1;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS CDS 6824 7889 . - 0 ID=cds.g13735.t1;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS exon 5368 5831 . - . ID=g13735.t1.exon2;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS CDS 5368 5831 . - 2 ID=cds.g13735.t1;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS exon 4346 5249 . - . ID=g13735.t1.exon3;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS CDS 4346 5249 . - 0 ID=cds.g13735.t1;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS exon 3828 4216 . - . ID=g13735.t1.exon4;Parent=g13735.t1 NODE_1985_length_8199_cov_35.4975 AUGUSTUS CDS 3828 4216 . - 2 ID=cds.g13735.t1;Parent=g13735.t1 #PROT g13735.t1 g13735 MAPACATEKFYKCVICTKVVNNQSNFRKHCQKHHPATPHRLLMIKSVCVIVPAAGPAPADVDALPHVRADSPLPAGGIGHAEPQNAHNAVDDHAAVGDNDVDAAGPVPPVVAKGPSKVCGWEGCNFTHTQRVGIVDHRRAIHNEDIPEERYTFTSRQEFDKWKAQEEHLSNSSYVRMTSARVTSMGTTHEYFICHRDGTHKPATIYPAEVVAGSQRKQRPHRAKESCKSGVCCISTINLEIITNPDDLTAPPTFTVKYIPVHTGHEVGFAALRHVPISAEIVQLITFKLDSGIPHARIIEDLRGDVCERANRKDFELNARREHFISLQDIRNIQRRLNLFRGVLDGSDAVSVQKKVALLQAEAYNPILAFKMAGTDDTTGLGFKNEDFFLGIQTEEQRDAFRRHGGKLVCMDTTHGISEYNYKLLTLTVVDNFHQGIPVGWAILSNETKPFIRAFLSCVKARSEMVNVQVVMTDDDNAEWSAFEEVYPEAIHLLCRWHVDKNWQKNIHAKVPKAYQQDVYKRLNAMMVSQTPEDFHLHLDAFHHEYGTVDSMSTFNKYFSRIYTVRKKKWSLAWRRFDHSDCDTNNFVEAWHNILKTKYLDGKLNRRIDFLLDHLLIAECDYFVAIKRKQHGFVLNEVLRRVTERQVRGVRIASAVPSHILRLLFVDRDGQDVWHVSFGARQQRLVCIREIAAANVPAGPPDIIAPAVATHYVVERLLVAAAVANVAAPPELHKHCDCNDSEHFGVCHHEWCCSCIDFVLGHICKHIFAVQSSRAVSDGDAGALQLAPRSRNVLAAGAQRAVHHTENEAELDVVLRRYKEVGVLLASASSTEKHRDRFHLVARTLLANIEGIERAVASIRTAPVWQPGHQFSRERVIAPNTSQETVLRGFFPQRKRSATPAGALVAATEEGQDALMLEGAHLPLHWERMPQPTVKKPRLS* # PASA_UPDATE: g13734.t1, single gene model update, valid-1, status:[pasa:asmbl_3163,status:12], valid-1 NODE_1985_length_8199_cov_35.4975 . gene 2 2716 . + . ID=g13734;Name=g13734.t1 NODE_1985_length_8199_cov_35.4975 . mRNA 2 2716 . + . ID=g13734.t1;Parent=g13734;Name=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 2 67 . + . ID=g13734.t1.exon1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 2 67 . + 0 ID=cds.g13734.t1;Parent=g13734.t1;5_prime_partial=true NODE_1985_length_8199_cov_35.4975 . exon 273 339 . + . ID=g13734.t1.exon2;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 273 339 . + 0 ID=cds.g13734.t1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 548 661 . + . ID=g13734.t1.exon3;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 548 661 . + 2 ID=cds.g13734.t1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 894 986 . + . ID=g13734.t1.exon4;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 894 986 . + 2 ID=cds.g13734.t1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 1612 1746 . + . ID=g13734.t1.exon5;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 1612 1746 . + 2 ID=cds.g13734.t1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 2083 2125 . + . ID=g13734.t1.exon6;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 2083 2125 . + 2 ID=cds.g13734.t1;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . exon 2308 2716 . + . ID=g13734.t1.exon7;Parent=g13734.t1 NODE_1985_length_8199_cov_35.4975 . CDS 2308 2716 . + 1 ID=cds.g13734.t1;Parent=g13734.t1 #PROT g13734.t1 g13734 IARKPSKEDLSSYRAAVTAFIQEIDVMVALRHPNIVLFMGASLAEPNIALVVEFMANGSLTDVFDRLTPSEFDWTLRLKFALVVLVLTLCVIDYVVRADAAKGMEYLHSNSPPLSDFGLATLQRAKSENHAIGTLYWMAPELITGTDQLTGAADVYSYGIILWELMGRCLPYRYAAGMAPMLAMHVVRSHHRPMPLPESAPAPFVDLMRSCWDADPSSRPNFTSISRSLEAMAPDAGAWEDTVLPTYKTGDPESDFRYLISEFPDNGDSDTNALINSILGGSQKPPSKRKSTLSGLSSQLKSFLQRMT* # PASA_UPDATE: g8479.t1, single gene model update, valid-1, status:[pasa:asmbl_1832,status:12], valid-1 NODE_1515_length_10790_cov_41.2107 . gene 280 3231 . - . ID=g8479;Name=g8479.t1 NODE_1515_length_10790_cov_41.2107 . mRNA 280 3231 . - . ID=g8479.t1;Parent=g8479;Name=g8479.t1 NODE_1515_length_10790_cov_41.2107 . five_prime_UTR 2626 3231 . - . ID=g8479.t1.utr5p1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 2530 3231 . - . ID=g8479.t1.exon1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 2530 2625 . - 0 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 2230 2318 . - . ID=g8479.t1.exon2;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 2230 2318 . - 0 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 1995 2063 . - . ID=g8479.t1.exon3;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 1995 2063 . - 1 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 1587 1680 . - . ID=g8479.t1.exon4;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 1587 1680 . - 1 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 1316 1427 . - . ID=g8479.t1.exon5;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 1316 1427 . - 0 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 910 1081 . - . ID=g8479.t1.exon6;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 910 1081 . - 2 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 618 733 . - . ID=g8479.t1.exon7;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 618 733 . - 1 ID=cds.g8479.t1;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . exon 280 396 . - . ID=g8479.t1.exon8;Parent=g8479.t1 NODE_1515_length_10790_cov_41.2107 . CDS 280 396 . - 2 ID=cds.g8479.t1;Parent=g8479.t1;3_prime_partial=true #PROT g8479.t1 g8479 MASSNAFIPQRRYRTVLVDPLDESQPFWWPAVVVPPDEYDSSMTAPTRSGDLLVRYFEDNSFSITKESEVKDLYATDSVPGSHAHDDNVRTALHFLNTGIAPRGFKWSAWRAMERKSSGYESSPDSSENSDSAHEDASEPVRAASNAPLSAVDASDEHKPECPAGDSSLDSDSKPLFALLDEKGVKWCRYCGTTDGVNWRPGPWGRQTLCNKHGLDWKGYGQTTKKPRLDLEAYARETVPDRKQPVLQDFCHNDVCKKPSDHSGMGKLVCCAGCSSAYHKKCATRPMT # ORIGINAL: g8480.t1 original gene structure, not modified by PASA NODE_1515_length_10790_cov_41.2107 AUGUSTUS gene 4488 8687 . - . ID=g8480;Name=g8480.t1 NODE_1515_length_10790_cov_41.2107 AUGUSTUS mRNA 4488 8687 . - . ID=g8480.t1;Parent=g8480;Name=g8480.t1 NODE_1515_length_10790_cov_41.2107 AUGUSTUS exon 4488 8687 . - . ID=g8480.t1.exon1;Parent=g8480.t1 NODE_1515_length_10790_cov_41.2107 AUGUSTUS CDS 4488 8687 . - 0 ID=cds.g8480.t1;Parent=g8480.t1 #PROT g8480.t1 g8480 MEAAQRSRSAEAQLEDVRKPLPTHAPHGLLVGGVGVAMAPLSVPAIRQPNSSSNNTHSVGIDRRLNASGAEAASDVGDVFAAPLLDSSALSPASDDESAAVSPTRDRRCVFERPASECRLNERPIRTVIHGHLSVPRSLRDGGAGAVHSLFGATEVSHNEVLEGLNAVFGDGAAGAWRTRLPDEASRWAVDGHVVDVPKFLSAFGAKVRRNVRDSNGETDLHLAVRLGCKRVVIALLLSHGADPLIGDSRGRNAVHVAATWGHIDAMDELLSSPAVVQSNGEAISAVDAAGETPLHTAARLGYVAIVQRLVAAGAQVGARDREGDSVLHAAVVGGHASVVAIIAQLSADANPTNKMRMSPLHYAAALNSPAITVALVLDGAASSLESHVRISALWKDTATGPVPRDADCDSEAAQKHDPSQFAPIRAKATLSACILSGSSAITKKTSSVVTPPSSSTTADAAADAPRCASIPAALQTSFVEHVASSTEESEAIVAATCELLVAERTKMPCAINRRLFLNARDADRRTPLHYACHAGRVGASSLLIAAGADFRAVDSEGWTPLHYACVAGNADLVSRLCALGADVRATDSEGNTPLHYTAFLGHSDVCRALLDAGAPPSAKNRDGETAMHKAAFRGDSNCGKMLLACGAEADAANATGLTPLHFACRNGGVSFVELLLREGRADVNKRNAEGASPVHMATMGGHHAILKLLLDSGAAPDACDNDRRFRPIHLAAYTGSNDCIELLRSRGVPVNPIDTEGITPLHFACIAGHVDTVRLLATHGADIASADSKGRGCLSYAANNGRSELVKALLSPTDGPLAAFLSAARPIDVNAVDSMGDTALHLCVTEGHSDVAMALVDCGANMNTVNAASETALGCASRLGRDGCVRVLLERGAPWDAQDKMGRLPLHWAVAGGHVACAALLLKPPERQQGVGVVDAQNEHDPRDAADADDGAMDESADPVVDHAEGNVMDVPEVQNAFNNNNNPNGDDGAAASASLRMNLNANADASGPRSGLPWRRAMTNVHLLPHLHGEDEEGNRDRDNDRDREGDEGDENLADAEPRARDAPPSADSDDAMSHRDSDSDVSEIEDHPLLPAVEGVNRGDDNGATPLHIAACTGHFACVKLLIDSGADVRATDNEVSFPVHKAAYNGHLDCLRLLLAACPEHLNAVDGEMSSPLHKAVYNGHVDCAQYILDRGCGPDPTDGSGWTPLHMAAHRGKASCVALLLARGASVSLCVPTGRHAPLHLAVRAGQSECIKQLVSGHRGNLDLQDGDGRTALHHAVMRGSAEYAELLLNAGANPDVFDNNGCGALMHAMLANNMVMVRRLIDSGASLLPGEVRRRGSLAAAVATPAVAGHHGDGERSLRSLIKDAGDETLSLLVELGVDVDRVRKHKRMCLGR* # PASA_UPDATE: g3218.t1, single gene model update, valid-1, status:[pasa:asmbl_2419,status:3], valid-1 # PASA_UPDATE: g3218.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2424,status:3], valid-1 NODE_1714_length_9552_cov_39.7479 . gene 2020 8456 . + . ID=g3218;Name=g3218.t1 NODE_1714_length_9552_cov_39.7479 . mRNA 2020 8456 . + . ID=g3218.t1;Parent=g3218;Name=g3218.t1 NODE_1714_length_9552_cov_39.7479 . five_prime_UTR 2020 2157 . + . ID=g3218.t1.utr5p1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 2020 2181 . + . ID=g3218.t1.exon1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 2158 2181 . + 0 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 2362 2450 . + . ID=g3218.t1.exon2;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 2362 2450 . + 0 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 2625 2667 . + . ID=g3218.t1.exon3;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 2625 2667 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 2907 2953 . + . ID=g3218.t1.exon4;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 2907 2953 . + 0 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 3407 3478 . + . ID=g3218.t1.exon5;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 3407 3478 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 3581 4630 . + . ID=g3218.t1.exon6;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 3581 4630 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 4977 5114 . + . ID=g3218.t1.exon7;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 4977 5114 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 5334 5445 . + . ID=g3218.t1.exon8;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 5334 5445 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 5707 5886 . + . ID=g3218.t1.exon9;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 5707 5886 . + 0 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 6164 6299 . + . ID=g3218.t1.exon10;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 6164 6299 . + 0 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 6586 6730 . + . ID=g3218.t1.exon11;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 6586 6730 . + 2 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 6893 7029 . + . ID=g3218.t1.exon12;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 6893 7029 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 7304 7373 . + . ID=g3218.t1.exon13;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 7304 7373 . + 2 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 7644 7793 . + . ID=g3218.t1.exon14;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 7644 7793 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . exon 8148 8456 . + . ID=g3218.t1.exon15;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . CDS 8148 8343 . + 1 ID=cds.g3218.t1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . three_prime_UTR 8344 8456 . + . ID=g3218.t1.utr3p1;Parent=g3218.t1 NODE_1714_length_9552_cov_39.7479 . mRNA 2020 8456 . + . ID=g3218.t1.1.5b6be70a;Parent=g3218;Name=g3218.t1 NODE_1714_length_9552_cov_39.7479 . five_prime_UTR 2020 2181 . + . ID=g3218.t1.1.5b6be70a.utr5p1;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . five_prime_UTR 2362 2450 . + . ID=g3218.t1.1.5b6be70a.utr5p2;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . five_prime_UTR 2625 4049 . + . ID=g3218.t1.1.5b6be70a.utr5p3;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 2020 2181 . + . ID=g3218.t1.1.5b6be70a.exon1;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 2362 2450 . + . ID=g3218.t1.1.5b6be70a.exon2;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 2625 4630 . + . ID=g3218.t1.1.5b6be70a.exon3;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 4050 4630 . + 0 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 4977 5114 . + . ID=g3218.t1.1.5b6be70a.exon4;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 4977 5114 . + 1 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 5334 5445 . + . ID=g3218.t1.1.5b6be70a.exon5;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 5334 5445 . + 1 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 5707 5886 . + . ID=g3218.t1.1.5b6be70a.exon6;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 5707 5886 . + 0 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 6164 6299 . + . ID=g3218.t1.1.5b6be70a.exon7;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 6164 6299 . + 0 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 6586 6730 . + . ID=g3218.t1.1.5b6be70a.exon8;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 6586 6730 . + 2 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 6893 7029 . + . ID=g3218.t1.1.5b6be70a.exon9;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 6893 7029 . + 1 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 7304 7373 . + . ID=g3218.t1.1.5b6be70a.exon10;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 7304 7373 . + 2 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 7644 7793 . + . ID=g3218.t1.1.5b6be70a.exon11;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 7644 7793 . + 1 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . exon 8148 8456 . + . ID=g3218.t1.1.5b6be70a.exon12;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . CDS 8148 8343 . + 1 ID=cds.g3218.t1.1.5b6be70a;Parent=g3218.t1.1.5b6be70a NODE_1714_length_9552_cov_39.7479 . three_prime_UTR 8344 8456 . + . ID=g3218.t1.1.5b6be70a.utr3p1;Parent=g3218.t1.1.5b6be70a #PROT g3218.t1 g3218 MATWAKIQRHQEVRALYGSQFPIELRHYFAHWIEAQPWDALAQSGGDGSRVKAYADMLENMLEQKIKSIDLADDSDSFLLRLRLEEIAGQYKLAFGDNPLLLAATLAKCLHREKEHIAQLSASAASVGKESAVAQSNERDPDAVKIGAQLEALQGHAAENEAELRALTQQHESLVIRIQEISQLEAIVKQINASPQNAQGRQHEQLAKKRLSDLKASFSGDAVATCTRTDRLVARIGGVLCDISAVQAMVVDGRLNLWRLEQRRGLLCAAQSAEESGGAAATASLGASLSASGFAALDGGSSSSSSGGGVADAAHLSLIQAWCETLATITWRSREHAKEAQRVALQVPLIAGAHGSDSAAGRTVSVGGVLAEAKTAADACGLLVAESSRLLGSLVASSFVVEVQPPQVLRTQSKFSASVRLLGAKALGVHVTPPEVVATIVSEQQARDALSMPSFTVNLHAGGSQPSHADASGVQAFANSAGDILNNRKMLESTASDGAIRVGFKNMSLKKIKRKEGGGSKGDGEHMSVTEEKFAILFQSRFVVGGGQLCFCVRALSLPIVVIVHGNQLPSAQATILWDNAFADVQRVPFEVPSDVAWASLAAALNSHFAQASGRLLSEGDMEYLAAKLPDSLFGHERIVSRHTVLKEALPGRDFTFWEWFYGCEVLVARHLQGPFMEGLILGFCNKQQAQDLLSNCQNGTFLLRFSDSEVGGVTVAWIAEDELGIRQVWNLQPWFAKDFAIRSLSDRIHDLPQLQTLFPDRPKDLAFGKYYTPLTATPTKPGTDYVRTTIAAVIPGSALPAAPIGLLDASMFAYPLDDLNALAMSLGAGGVGFIRGGASGDPPNDMEFTELLRQLQNQDGM* #PROT g3218.t1.1.5b6be70a g3218 MVVDGRLNLWRLEQRRGLLCAAQSAEESGGAAATASLGASLSASGFAALDGGSSSSSSGGGVADAAHLSLIQAWCETLATITWRSREHAKEAQRVALQVPLIAGAHGSDSAAGRTVSVGGVLAEAKTAADACGLLVAESSRLLGSLVASSFVVEVQPPQVLRTQSKFSASVRLLGAKALGVHVTPPEVVATIVSEQQARDALSMPSFTVNLHAGGSQPSHADASGVQAFANSAGDILNNRKMLESTASDGAIRVGFKNMSLKKIKRKEGGGSKGDGEHMSVTEEKFAILFQSRFVVGGGQLCFCVRALSLPIVVIVHGNQLPSAQATILWDNAFADVQRVPFEVPSDVAWASLAAALNSHFAQASGRLLSEGDMEYLAAKLPDSLFGHERIVSRHTVLKEALPGRDFTFWEWFYGCEVLVARHLQGPFMEGLILGFCNKQQAQDLLSNCQNGTFLLRFSDSEVGGVTVAWIAEDELGIRQVWNLQPWFAKDFAIRSLSDRIHDLPQLQTLFPDRPKDLAFGKYYTPLTATPTKPGTDYVRTTIAAVIPGSALPAAPIGLLDASMFAYPLDDLNALAMSLGAGGVGFIRGGASGDPPNDMEFTELLRQLQNQDGM* # ORIGINAL: g3217.t1 original gene structure, not modified by PASA NODE_1714_length_9552_cov_39.7479 AUGUSTUS gene 134 1636 . - . ID=g3217;Name=g3217.t1 NODE_1714_length_9552_cov_39.7479 AUGUSTUS mRNA 134 1636 . - . ID=g3217.t1;Parent=g3217;Name=g3217.t1 NODE_1714_length_9552_cov_39.7479 AUGUSTUS exon 1572 1636 . - . ID=g3217.t1.exon1;Parent=g3217.t1 NODE_1714_length_9552_cov_39.7479 AUGUSTUS CDS 1572 1636 . - 0 ID=cds.g3217.t1;Parent=g3217.t1 NODE_1714_length_9552_cov_39.7479 AUGUSTUS exon 134 1379 . - . ID=g3217.t1.exon2;Parent=g3217.t1 NODE_1714_length_9552_cov_39.7479 AUGUSTUS CDS 134 1379 . - 1 ID=cds.g3217.t1;Parent=g3217.t1 #PROT g3217.t1 g3217 MASSMFLLRGAALRSNARARIGRRIVSSTALSIAPRTLTASHFVTVTGSTTATSIRPAAISTGQTYDRVRDTVREALDLCNRVDDKSTYAQLLQESLQRLEGGGPFRLVVLGEINTGKSALINTLVAHLSKNSPLAGDVSLPAVESAVVETKKTHRIVYGESVAVEDAVSEDGFPERLIRHPSPFMAENGGIEFVDTAGLSTTPESVKSAVRYGDVIVFVTDTTRQLSERLESQVLKQLQHSRVVVVVGKIDRHLDSSDSTEKEAELDRIVRHVESRAKELTKDANIRTFRLSSRYARNGRSDSGVREFGEFISREFSPDARMAARLAGSVGVSRYAVDALARRVEIALTSARGTHDALTALDRQTAAYEQEMAEEFSREELEVIDRTVIAIKDNIIEHFREDLRGFKLVGQWGTEKIESLLSGAFGRDFLREVEYR # ORIGINAL: g6164.t1 original gene structure, not modified by PASA NODE_620_length_20091_cov_43.489 AUGUSTUS gene 13878 14686 . - . ID=g6164;Name=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS mRNA 13878 14686 . - . ID=g6164.t1;Parent=g6164;Name=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 14560 14686 . - . ID=g6164.t1.exon1;Parent=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 14560 14686 . - 0 ID=cds.g6164.t1;Parent=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 14229 14372 . - . ID=g6164.t1.exon2;Parent=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 14229 14372 . - 2 ID=cds.g6164.t1;Parent=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 13878 14134 . - . ID=g6164.t1.exon3;Parent=g6164.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 13878 14134 . - 2 ID=cds.g6164.t1;Parent=g6164.t1 #PROT g6164.t1 g6164 MGRRYYCDHCDKGFTDNPSSRKKHLLSANHLRTVRNHYDSFRDFETRQQQMRASCAPPAAARTVCARFLASGHCEFGAFCHFSHDSQDALAAKHTEAVLSKYLPASTAGPVGMSSLPETTAQCSQYAPYVFGADAMAAIRGVGPLPPSLIPPPPLQQQQHQQQQQRQSSTGAEWG* # PASA_UPDATE: g6162.t1, single gene model update, valid-1, status:[pasa:asmbl_8522,status:12], valid-1 NODE_620_length_20091_cov_43.489 . gene 4215 5464 . - . ID=g6162;Name=g6162.t1 NODE_620_length_20091_cov_43.489 . mRNA 4215 5464 . - . ID=g6162.t1;Parent=g6162;Name=g6162.t1 NODE_620_length_20091_cov_43.489 . five_prime_UTR 5419 5464 . - . ID=g6162.t1.utr5p1;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . exon 5416 5464 . - . ID=g6162.t1.exon1;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . CDS 5416 5418 . - 0 ID=cds.g6162.t1;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . exon 4802 4937 . - . ID=g6162.t1.exon2;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . CDS 4802 4937 . - 0 ID=cds.g6162.t1;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . exon 4215 4455 . - . ID=g6162.t1.exon3;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . CDS 4304 4455 . - 2 ID=cds.g6162.t1;Parent=g6162.t1 NODE_620_length_20091_cov_43.489 . three_prime_UTR 4215 4303 . - . ID=g6162.t1.utr3p1;Parent=g6162.t1 #PROT g6162.t1 g6162 MTKGTQSFGKRHVKTHTLCVRCGRRAFHAQKHECGACGYPAARLRKYNWSNKAIRRKTTGTGRMRHLKSVYRRFKNGFREGTVAKSQKKRAAAKSA* # PASA_UPDATE: g6165.t1, single gene model update, valid-1, status:[pasa:asmbl_8527,status:3], valid-1 NODE_620_length_20091_cov_43.489 . gene 15136 16782 . + . ID=g6165;Name=g6165.t1 NODE_620_length_20091_cov_43.489 . mRNA 15136 16782 . + . ID=g6165.t1;Parent=g6165;Name=g6165.t1 NODE_620_length_20091_cov_43.489 . five_prime_UTR 15136 15184 . + . ID=g6165.t1.utr5p1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . exon 15136 15188 . + . ID=g6165.t1.exon1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . CDS 15185 15188 . + 0 ID=cds.g6165.t1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . exon 15628 15848 . + . ID=g6165.t1.exon2;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . CDS 15628 15848 . + 2 ID=cds.g6165.t1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . exon 16044 16365 . + . ID=g6165.t1.exon3;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . CDS 16044 16365 . + 0 ID=cds.g6165.t1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . exon 16576 16782 . + . ID=g6165.t1.exon4;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . CDS 16576 16679 . + 2 ID=cds.g6165.t1;Parent=g6165.t1 NODE_620_length_20091_cov_43.489 . three_prime_UTR 16680 16782 . + . ID=g6165.t1.utr3p1;Parent=g6165.t1 #PROT g6165.t1 g6165 MGISRDSQHKRRSTGGKMKPMHKKRKFELGRPAANTKLGAKRIHVVRTRGGHQKFRALRLETGNFSWGSENTTRKTRIVAVVYNASNNELVRTNTLVKNAIIQIDATPFRQWYEAHYGLPLGRKNKGKKEEAVAEGEKAEEDVLTKKRSKHVLRKVASRKAESKVDPNLAEQFTAGRILACISSRPGQSGRCDGYLLEGKELEFYLRKIRAKKSTK* # ORIGINAL: g6163.t1 original gene structure, not modified by PASA NODE_620_length_20091_cov_43.489 AUGUSTUS gene 5991 13838 . + . ID=g6163;Name=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS mRNA 5991 13838 . + . ID=g6163.t1;Parent=g6163;Name=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 5991 6163 . + . ID=g6163.t1.exon1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 5991 6163 . + 0 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 6357 6675 . + . ID=g6163.t1.exon2;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 6357 6675 . + 1 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 6821 7985 . + . ID=g6163.t1.exon3;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 6821 7985 . + 0 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 8135 8268 . + . ID=g6163.t1.exon4;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 8135 8268 . + 2 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 8429 13279 . + . ID=g6163.t1.exon5;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 8429 13279 . + 0 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 13506 13614 . + . ID=g6163.t1.exon6;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 13506 13614 . + 0 ID=cds.g6163.t1;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS exon 13750 13838 . + . ID=g6163.t1.exon7;Parent=g6163.t1 NODE_620_length_20091_cov_43.489 AUGUSTUS CDS 13750 13838 . + 2 ID=cds.g6163.t1;Parent=g6163.t1 #PROT g6163.t1 g6163 MASSLASQLKRIRLPTAQEDVAKGRVSLLFDARQAADIDLETVFSLGVNGLAELRTLNDKFGPFEKTLFSESVKSVDRALQTKDVNIALDVNIARFMRLVSPYFLLKPAQKALEWLVRRFRIHELNQEAVLEAVLPYHETKLFVRVVQILALDAPGMERWGWLQGVQKNGTPLDKDTLVQRCASDHSILAFIGDAVVASLSHEVGGVGRHLVSFYAATVIGVLEAAHEVGEAVVQLLLPFVLAGLKASSVDLVVATCMIVAQLARRATLAEALVGTVVDTLCLHASNGGCPLRHAITCCVLVCQTQPMRDFPVRAFRILSRLPSFVDELADVSAVYDTSAFVELIARRFVGHFATAAEYRETLTRVVASVRLPTSAAFAVAQAAVEYYIVQRLLAGDDAAALEALSAALSELVREIDLRYAAELDRAVEAQMQRLDAGGKDDAQRALIHGFVGLSTRGVRHTPVEGTSTTLFLSLNHSQPSVRLLAVRQVAANLKGARRDDAEFVSEALVARLADEDRSVVAAVLDIGAALVGTVAPACLLDAISSMIARNAGAAEKRRKTLVKAIGILVGPLVQSHPRMADAVVAAILPCLFVTNDSPKYGRAVIKAVAESHLASKHPLLAGIGAVVSAREFATASEDAAIGPGVVAAINASVARALARSALATPHAESLLSAMAALANPPGGDAQAATDADRRLLERCGRLVGWLVLAAAASSGSDRASLSAARHLLGALARHVTAHASLAASASAEAQSPVEGSVAPTALLVRVAGAPSKDAEVASVALALSLLHCVVDGAATAAGGEAEAAVFSRELFVALAGARDAQLYAPHLKRFVSTVLGGRPLRFLVSVWTSDTHGLEHARALLLADAYMRSFADPSSEAGVDFQRLLPSLFVGLASPAKSVRAASVRCVAAVALCCGKQRATEYTLESLSASHGASAPLAHAHLVRLLASLEAASGLIADDAEHVSRVLSREAAESGGYGSALAAYVASNAVAAGEGRVQHCLLTLVRGVATAERLPILLPLLESLVSRAELSGYHSLSGHARASLRAVLEDYSEHSLPLLSGKGSSDGKQNSYVEVFVHALSVGDDAHSMDSPQGAALARVTPALFGRLASRAQKAVFSAMCDIATESAGHDVAVAAAAVMRAVPVPSAVLVHELTRYSAAETLRQSPEQREKRGRRNPQAQSPGQAKEEADRRALAHATVVLELLQTKDNVEEVHRLVPVLFDVLGLLLESKPAQQGTLDYPRQLALGALTAACRAGGADVDGSALKMDTVVQCVRVSDNPQTHHHALLLLATLAASHPDRVLQNIMPIFTFMGANVLRQDDSYSFHVIQRTIETVIPPLVASSAARDKAASSDIVVGVMRVFVDAVAHIPVHRRLRLFTHLVRTLGASEYLPPIVALLLERGAVERLVQSPDDAPADAATAVLTAAPATTAATAVTATTAASGGDGGLGVMGELSLALTQQVDAAVQLATAGEIVRLLHRLPHDKPKVDEGAARKRAVGATPGRTPSGAHAGRKGVPPQETERIADGAVVPDALLFDAQVRSAKQLRQFKLLAVSYVSALLSSRPFLAAVRLAENAQTEPRFLALLESLLSLVASVSAHASRIEHDAHDNQQQQQQSISVARFWKQQVGTRLYDAIDKVNGLLAIPAFVGVVSRLMSHKDGAIRRKSLALFNARVSDGRDGASSGKGRGPRSFSAADTSALLGMVPTLLACVGGGVADAAVAGDASKGDSAAVNRQTALLGIDLLARAFGQRHPDRFVEALPVVMGPGAMRNGNAQVVASGIVCVATLCGELGARVLPFLPALVPQLLTALNDSIARASLSSAANSAPSTDADRRRKDKERAESSTALLQMSAVSAIGVLVTQLPQFLSPYLTSILTSLSHRTLDASQSGAVAQKAAAVRKLAASSVPSRLIIPALQDAVTAACAHVEGDGFASAAPSIGALAEIAEDAFAALPKEDVPALHKAAFKVIVTILDVRTRVQTDVAAAQQVQTPKKKGKGAAAVTPPAAGSGEAVTGALALVEGKAIGALVALVMRLSENTFRPLFARLCEWGTAEGSPRRRLLPFFAAIETLARRLRSLFVPFAGGIVSTCVELLSANTREMGRKDAATSELTFSADEPSGDALVSVIASALEQCFLHDTSNAFLTRERFDALLRPLVDQLDNGLGGAALWERRASDRIVPCLAQMAVAAGSEALWKPLNYNVLLKTRSADAKIRLVALRAVHEFYKRLGEEFIILLPETIPFLAELMEDEDGDVERQCQDVIATIETFLGESLQKYF* # PASA_UPDATE: g6161.t1, single gene model update, valid-1, status:[pasa:asmbl_8526,status:3], valid-1 NODE_620_length_20091_cov_43.489 . gene 258 3873 . + . ID=g6161;Name=g6161.t1 NODE_620_length_20091_cov_43.489 . mRNA 258 3873 . + . ID=g6161.t1;Parent=g6161;Name=g6161.t1 NODE_620_length_20091_cov_43.489 . five_prime_UTR 258 524 . + . ID=g6161.t1.utr5p1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 258 683 . + . ID=g6161.t1.exon1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 525 683 . + 0 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 915 1010 . + . ID=g6161.t1.exon2;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 915 1010 . + 0 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 1113 1238 . + . ID=g6161.t1.exon3;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 1113 1238 . + 0 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 1507 2110 . + . ID=g6161.t1.exon4;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 1507 2110 . + 0 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 2384 2461 . + . ID=g6161.t1.exon5;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 2384 2461 . + 2 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 2682 2825 . + . ID=g6161.t1.exon6;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 2682 2825 . + 2 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 3066 3168 . + . ID=g6161.t1.exon7;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 3066 3168 . + 2 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . exon 3323 3873 . + . ID=g6161.t1.exon8;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . CDS 3323 3632 . + 1 ID=cds.g6161.t1;Parent=g6161.t1 NODE_620_length_20091_cov_43.489 . three_prime_UTR 3633 3873 . + . ID=g6161.t1.utr3p1;Parent=g6161.t1 #PROT g6161.t1 g6161 MKNALDPANVYKRTIRRLTKLGKSWRHGAKPDDAKPSSSSLPDAQSDSRMSYDAPNDDLQLAVKRPTGTPLDEWLAVNIIDFYNQINLLYAVVSRHCTDITCPVMSAGPTFEYYLKEDKGAGGGAFQVSAPEYTEQLMAWVASQLIDPELIPAHNRPFPERFMAVAQTIFRRLFCVYAHIYCAHQKDLTESGLWDVFGIRCRHFLYFVFEFDLIQRRQLAPMWSLVAAVLDLRGRINSGGAAAAGLDPEARLDFQRRALDAWLERRKRSSVERKGSGASSSAPMSLARTNVFGVALAATIDRERFLEGSARVVPRIVEQCVEFLGDPSYIQKEGLFRVSGSVGRIQKLRQCFDQDSDSVDLHSDEWCFAVHCVASVLKLFFRELPDSLLTTELYDQWVDAGKLEDDSARYVEIHKLVDSIPPYNRETLKFMVEFLARVAGHSELNRMTIDNLAIVFGPVFLWPRDRVGESMRTNSQSQARVVQSLIAGAVDIFGAARPSQSSQSAGLSSVTSGSGMTLGVASEEGVVVHVGTVTASPLA* # PASA_UPDATE: g6166.t1, single gene model update, valid-1, status:[pasa:asmbl_8523,status:12],[pasa:asmbl_8525,status:12], valid-1 NODE_620_length_20091_cov_43.489 . gene 16851 19867 . - . ID=g6166;Name=g6166.t1 NODE_620_length_20091_cov_43.489 . mRNA 16851 19867 . - . ID=g6166.t1;Parent=g6166;Name=g6166.t1 NODE_620_length_20091_cov_43.489 . exon 19792 19867 . - . ID=g6166.t1.exon1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . CDS 19792 19867 . - 0 ID=cds.g6166.t1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . exon 18555 19668 . - . ID=g6166.t1.exon2;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . CDS 18555 19668 . - 2 ID=cds.g6166.t1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . exon 17660 18236 . - . ID=g6166.t1.exon3;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . CDS 17660 18236 . - 1 ID=cds.g6166.t1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . exon 17220 17379 . - . ID=g6166.t1.exon4;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . CDS 17220 17379 . - 0 ID=cds.g6166.t1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . exon 16851 17067 . - . ID=g6166.t1.exon5;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . CDS 17009 17067 . - 2 ID=cds.g6166.t1;Parent=g6166.t1 NODE_620_length_20091_cov_43.489 . three_prime_UTR 16851 17008 . - . ID=g6166.t1.utr3p1;Parent=g6166.t1 #PROT g6166.t1 g6166 MFRAVAQVTHVGNYILGKTLGIGSTGRVRLGTHLQTGKTVAVKIIKKDSLASSPDLLGKVEREIAIMKLIDHPNVLSLYDVYENSQSLFLIVEHVEGGELFDYLVQRGRLTTEETVRFFRQMISAVEFCHHHCICHRDLKPENLLLDKSNNIKIADFGMASLQRTGELLKTSCGSPHYASPEVIRGIKYDGRAADIWSCGIILFALLTGSLPFDDDNIHRLLHKVKEGRFEIPAMLPPEAQSLIAAMLTVEPAHRITIRGIRAHPFFNLPYPGGSLEPQTPALPVIPPITEMSELDDDILFSLRSLGLFNDEDALVAGLLSSDVTIEKAIYSLLKERRQRSLSNAGHEEVLPEPREADAPRKRTDSVGSEDASGRNSPCREIEFRRRFMSETLMHSSNGNRRIERSMSDVTATQSPKPLERSLSTVHSGRDNRDDLKTTHADSPPGSPRQVDVMPHGCGCGCMPHGCMVLVNTTIGCVRNRHQLVNAVTARIHVIMLLMSVDRLESCSMRPKKMFGGLSEKLSKISVGSPLSRRRRAETSPPASPLPPASPRRSWFSNVFGSSEREDAIVWMAKRSFQDVCVDLLRSFQSNGMKAKAYGPREGSFKVTHLASPFGKSVKVIFEVSPGQDAGPSCIVNATLHRGTVPAFKLVCTKIATDLAL* # ORIGINAL: g958.t1 original gene structure, not modified by PASA NODE_1730_length_9491_cov_42.3357 AUGUSTUS gene 1041 4058 . - . ID=g958;Name=g958.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS mRNA 1041 4058 . - . ID=g958.t1;Parent=g958;Name=g958.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS exon 1041 4058 . - . ID=g958.t1.exon1;Parent=g958.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS CDS 1041 4058 . - 0 ID=cds.g958.t1;Parent=g958.t1 #PROT g958.t1 g958 MDAESHTVSPAEQSSDEEYIPQSASPGGYGGRSRRGRRRSLASVREHTHVKSLHIAKKRRLSSHSYFDKRRDGSEDDAQGELSSGDSSAASPDRRRYAAARYSTRKESRGGDERASFDVASDDMDEKMIDMRSGNGAKKDVANSKVILRLSVDKLRRIDGDARVRQQITREDMRGGKVPATDAVGRMPLRANARRKVFSSEDGGVHVREVGSSPANEEARVGVRRPRHRQALLYSPKVVETARMCGLHPEKVSPEELEMLGGEGRISHAEHDVYVSTRNRILHAWCTDPRRRITRSHRMLQSLSDTRFVDVALTHLERRGKINHGVLPLPPSPSAESTRTSVCVLGAGIAGLAAARQLALMGFKVIVLEARDRVGGRVCSLSARGGGGEVDLGAMVVMGLGGNPLVPVMRQLGLRYSLLPSDCPLHWSDGSIVSPEIDSRADLRFNNALDVSKAQTTGSVGTNGEGVGGIAGDGGSRDTSSVSTPPPHASAPASAPAPAQSLWDAMCPALNGARTAAVDGSRKDASDGHTPLTDVDARLEELLCAWFGVNLEFANGAELRNLSALHWDQDDPYAVEGQHLLIRSGYASVPIALSRGIDVRYRCDVVGVDRRADGRVSVRMSRTTDEALARTIGRTLTKDNGHVIGTQDEDSFTEATSSSWAGWVSSTEAVTGVGAAFGARDTACSVLPEMGDRGSGSASHSRGDAGRSYVDDSASLHSEPSPRAKRAIKRREEEKRASRDAKREAAGMIEIVADAVVCALPLGVLRAKGDAFFTPPLPKYKREAMGRLGFGLVNKMFMCFERPFWDPSSSYFGHVGDSVDDMGMFYMFWNMAHVTGAPVLLAIIAGRVAESSESIPAVTLEHKALSILRTVHGAAVVDGAGFRFSHVTRWRADPFSMGSYSYVAVGADGSEYDDLAKPVCGFRRDDGEEECTDGVCRSPSSTSGAEHSPRLFFAGEHTMRHYPASVHGAYLSGLLAAGGVADAFLNKVSWSREDAADVFFENSGE* # ORIGINAL: g957.t1 original gene structure, not modified by PASA NODE_1730_length_9491_cov_42.3357 AUGUSTUS gene 90 249 . + . ID=g957;Name=g957.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS mRNA 90 249 . + . ID=g957.t1;Parent=g957;Name=g957.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS exon 90 249 . + . ID=g957.t1.exon1;Parent=g957.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS CDS 90 249 . + 1 ID=cds.g957.t1;Parent=g957.t1 #PROT g957.t1 g957 YPIALGMVASGAVNVKPMITHRFKLQETLEAFEVARTGRDNAVKVMIRVGDD* # ORIGINAL: g959.t1 original gene structure, not modified by PASA NODE_1730_length_9491_cov_42.3357 AUGUSTUS gene 5398 6714 . - . ID=g959;Name=g959.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS mRNA 5398 6714 . - . ID=g959.t1;Parent=g959;Name=g959.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS exon 5398 6714 . - . ID=g959.t1.exon1;Parent=g959.t1 NODE_1730_length_9491_cov_42.3357 AUGUSTUS CDS 5398 6714 . - 0 ID=cds.g959.t1;Parent=g959.t1 #PROT g959.t1 g959 MSAHDRLSKQACHPDATALLSGDNDGRIPPLSVPPNLWGLHGQLLDITKFYERHPGGSHFLARSRGVDISVMYEACHSPSTDAKRKIMLKEYVVDSPPSIARDSTVAGRNGPTVSPQTGNVADWNILDKDCFYQRMRRRVWSECSPHDFQLIYDSVIFAIVVAFYVTLFALALKAELWTFGQLVACAFVNGPLRAMVFGAGHVYIHTKRRQFVDIFVDYTLTSSFRWARTHIFLHHPFTNQAPRDVDHTSLARLREWPVYRRYLYIGLENIWKRFVEGIDALTTAPETPPLRSVLIRLHFPAEFALFYFSGALGWWALSWVAVNVYYQSMLLAGHYTDSCQLNGKHFRDWAMQQILVSNDFKITGIPSIDVFISVGLSEHTCHHLFPTFNPLSLVRVNNIVWEMCKEEGVPRQETPYLWDLWPDMYHGFLKSRKGDKV* # PASA_UPDATE: g960.t1, single gene model update, valid-1, status:[pasa:asmbl_2473,status:12], valid-1 NODE_1730_length_9491_cov_42.3357 . gene 8096 9289 . + . ID=g960;Name=g960.t1 NODE_1730_length_9491_cov_42.3357 . mRNA 8096 9289 . + . ID=g960.t1;Parent=g960;Name=g960.t1 NODE_1730_length_9491_cov_42.3357 . exon 8096 9289 . + . ID=g960.t1.exon1;Parent=g960.t1 NODE_1730_length_9491_cov_42.3357 . CDS 8096 9289 . + 0 ID=cds.g960.t1;Parent=g960.t1 #PROT g960.t1 g960 MPPSSASSRAFARAYPFVRWWSSLLLLSIVTAGIVLPIVVYQQTYSREQADLQDRLEEAAGAELLNIKDMFGKVSRTAQNLRIALHLTADGMLTNQQFADSVVLLDRPNAASGFMWSPRVTFAQRNAFEQNARAINNASTRYADYGITEPVAPRSQVNGVYDPTVPLNVTTAGNRTAYLPILYEWSKHNVSLLNRLGIDFFASVPVLGNVSKTIMSGNSSVRTNLEFKTDRLRKGMFIMTPVYRGLTIPDSVAGRVKNVMGLLSVGTEISVLVDDARAYMNKVSVHIFEEGGNGLLYAEQGASLVQYATDIAPIRRARYESVLSIGDRRFVFVAVPTEKLVDESMTSNPVIYASLCAVGLFVLLVGAVIAIRTIVLTQEKMVASERRRHCVNEMIGE* # ORIGINAL: g9145.t1 original gene structure, not modified by PASA NODE_3607_length_3128_cov_89.1759 AUGUSTUS gene 204 2313 . + . ID=g9145;Name=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS mRNA 204 2313 . + . ID=g9145.t1;Parent=g9145;Name=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS exon 204 713 . + . ID=g9145.t1.exon1;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS CDS 204 713 . + 2 ID=cds.g9145.t1;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS exon 903 1007 . + . ID=g9145.t1.exon2;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS CDS 903 1007 . + 2 ID=cds.g9145.t1;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS exon 1228 1479 . + . ID=g9145.t1.exon3;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS CDS 1228 1479 . + 2 ID=cds.g9145.t1;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS exon 1868 1981 . + . ID=g9145.t1.exon4;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS CDS 1868 1981 . + 2 ID=cds.g9145.t1;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS exon 2198 2313 . + . ID=g9145.t1.exon5;Parent=g9145.t1 NODE_3607_length_3128_cov_89.1759 AUGUSTUS CDS 2198 2313 . + 2 ID=cds.g9145.t1;Parent=g9145.t1 #PROT g9145.t1 g9145 VIHRDLKPDNMLINHEGHIKLTDFGLSRVILKEQEPETDWASVHRPFTQRTSGEPQDLASPPKSAALAVSGTSPGASSQAGPTLSASASSNQAGGASGALVAPSDAQGKSSSAGKDNPNRLSFSRQGSATLTANSSAGVLNTAQVPAVNRRNSKLIMRQNSAPLSPNVVALASAPTPAELRPCGIVKSISAQLLSNAELAPPVSLPTQPEEEKATGRKRWSISGPPPSLPFAATLTAPAEDGCATGGSGPNSAASAAAAAAVARRQSSHRIVGTPDYLAPELLLGMDHGIPVDWWSLGVCLFEFLAGVPPFNDSSEEAIFQNILNMEIPWAAVSDLMSPEAKDLISKLLNPKPEKRLKVKGEFF* # PASA_UPDATE: g13541.t1, single gene model update, valid-1, status:[pasa:asmbl_340,status:12], valid-1 NODE_1091_length_14038_cov_43.1549 . gene 12642 13998 . + . ID=g13541;Name=g13541.t1 NODE_1091_length_14038_cov_43.1549 . mRNA 12642 13998 . + . ID=g13541.t1;Parent=g13541;Name=g13541.t1 NODE_1091_length_14038_cov_43.1549 . five_prime_UTR 12642 12866 . + . ID=g13541.t1.utr5p1;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . exon 12642 13034 . + . ID=g13541.t1.exon1;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . CDS 12867 13034 . + 0 ID=cds.g13541.t1;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . exon 13215 13298 . + . ID=g13541.t1.exon2;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . CDS 13215 13298 . + 0 ID=cds.g13541.t1;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . exon 13543 13670 . + . ID=g13541.t1.exon3;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . CDS 13543 13670 . + 0 ID=cds.g13541.t1;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . exon 13844 13998 . + . ID=g13541.t1.exon4;Parent=g13541.t1 NODE_1091_length_14038_cov_43.1549 . CDS 13844 13998 . + 1 ID=cds.g13541.t1;Parent=g13541.t1;3_prime_partial=true #PROT g13541.t1 g13541 MASVAINDPYADDDGDDNVVVATGTGDDGPEDRSDDDEGNVEEEDQEVDYTLDPDHPLMRRVQERLKRQLLKERDRVIQEHREKSEQLKKLKDSREETGVELYSQQQQLAKLQMLLEKANDNFNTINHIRKGSETKVNLFNEESEREKQRLSTERRNGASAVTAYLFVCVCVCVCVCV # ORIGINAL: g13540.t1 original gene structure, not modified by PASA NODE_1091_length_14038_cov_43.1549 AUGUSTUS gene 369 8823 . + . ID=g13540;Name=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS mRNA 369 8823 . + . ID=g13540.t1;Parent=g13540;Name=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS exon 369 1177 . + . ID=g13540.t1.exon1;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS CDS 369 1177 . + 0 ID=cds.g13540.t1;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS exon 1357 5089 . + . ID=g13540.t1.exon2;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS CDS 1357 5089 . + 1 ID=cds.g13540.t1;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS exon 5284 5928 . + . ID=g13540.t1.exon3;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS CDS 5284 5928 . + 0 ID=cds.g13540.t1;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS exon 6114 7145 . + . ID=g13540.t1.exon4;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS CDS 6114 7145 . + 0 ID=cds.g13540.t1;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS exon 7288 8823 . + . ID=g13540.t1.exon5;Parent=g13540.t1 NODE_1091_length_14038_cov_43.1549 AUGUSTUS CDS 7288 8823 . + 0 ID=cds.g13540.t1;Parent=g13540.t1 #PROT g13540.t1 g13540 MGRRVRRRSRSLSGSHDPEEAASGGAAMSEPTRTARGYDTFSDDPVETTVLLAGETDNQEVLSLNLREHRGDGSFLTRKRVAVLAIVAVATVCIAVGLAVGLRGSSDNDQDDHNAAAVDALQASRTPSGDLQLSSALARLGVPSDSVEATASDIGVSWEPSQHSRRRASDGHITSILLANSSISVEKGAVLANGTLRLMLDAQNTVTVTCTVAVDTTGDAMAVDMRLTFAGTEDVQKWAKGIMDRAVGLVGEARDRMEAAVSASLASEALWQQVLQSTADRTFIDAETASQTIDSAISRAMDEMKTTGVILVGRASPLQSVVSAVTRLDNVLLSAVTGGATDVAFTSGKASLSLNGASAEAQMFAAVAIDTRTTTAAIVIGRGARKTGNSVNVNALRVSYSAGLATADAALSGQVSVRLGPSSSDAAVFALEGHVTGTRMQMTGALSGPYTLRLGAAKVAVTALSVEVDVNARGAVPPHVRISGTVGSASDDLSGGFAFALPLNECGTFNMSAHVTSLSSLVGSMVGDANALTHISSGGAIGSAVGKGAKTLMARLQEVATSTDVRVDASIQPLCGVVQLAGRVSSNGSTSFSKDFRWIVRIDEIVDAFADAGKGIARAIGSLVPDVTVRLPCGLGLSIESALSALLDAVKATSLPSLGDGVRLSGLGDVSLPDGIGGAVLSLQGLLARLREWIGALHSDTLSGALAKTADGVYVLVADLMAALEMAAAAVDAAIVRVLLSDGLAHIPEALLTDAVTSHAWRLGSAFNDVDIASLLEDLGSIPSALRGMSFPSLAAIFSSHALPWSLPTGFLDGAFNGLAGELTSGLSLLALTALSSLGELSHLASAATSDALVLVGRFVNDTFGGGGIDFEGALPVPLPLGEHVTLYNARVAIHTRPARPSLPVLEVVASATARIPGFTPLSFNASITANASAVLIRSSSCIDNWTIPTGLDLQVANVGLELSIPHGAIAEGGSAGVLPYTGNVFGDLTIGGLVLQARLPLPLLSGCVELSGHATRIRVSMGGLIKALLPHASLPSVASEIADDIFGADVDNLSLSVSPDCGTLSFSGVVSSKLIGSKVPLSADFGKDASWFNVLNTLIAMVDAVCKQTSCMTLLSKTVKLPNLDKFAIVTTIDDILGGIRDALANTEASVRDALGRLPRMLTSSILSTPEALFSEWRRVLSAAVANRADPSVCLKQVLSGGNNAVENCVTLVAALRAIAGDAESVELCPLCALEGIAVDRLFAWEYAMLIRVGASWTFTSIPGVTPFLQFIGLDDAALILASAETTIQLPDTLAAVANAESIVVSAGLSLAASINIAKSELIAAAFEFAGDAGNAVFVSVPKLSGNFSIHIHYGQSIDILGGAVEFRNLSLAISNTSPFFELQTDGSWNAPGGRRFDVKIRGAVTREAISMQGELESTLDLSLGPFSASVGDLAISVDYHRDAHAYAVEVSGTLKVAKLVFSLVVGVASGSQSDSCLTIRGKMGDARLSDIIETASLGLVTVPEAFNEGLLKVSFSSTSFAARALCNDDSKTSLNITSTVRSGLLGSATAALVFMRSPISLSDFDYGFFAMPVLDGHWGLEHMPGLSVDLVRSIGIQWPMFAISSFNMTIAVRDIFPEFSLPDWTFHLREHAIKLHASVDISAWPWGSVLRGIVEIQSGTMLTLDADIDGDQYDLDIELDGAVALRLPGPAGGVVLKHAGIRIANDDQVPLSVLGAVEIDLPHVSSNIEIDVMGIVERTGDNFYLNGSVTSVDGGCVLSVELGFTRLCVPYVAVAINRTADDEFSANVTAVVDFGTSLEFLVAAGDTERDGSTILSLNATALAPGDDGLTFHGANERSAHRGSIASVDIAAFGQRLLEVQLDRIGMGVMTDGETSVIWGNIEFSIDSVELEAAFAQASALDGGTDYAFFAGGKDLLKVLGNDIDALGHAFGFPDELGVVVSTFDTLDQIPFGGVHLLPGRAFPGKLVLEGLSVVGVLDFSKASAVAQTIAKLTGATELDLVVSIAKTILPMHVTAFFADTRIDVIPGILTIMPDTLEASVERNFLASSFGVLVHADVTIRSQTVHLAGDFKVEPMVATIKFGLAAHNINGAISFFGFEFFLVDALMCEIGLTGGFVPTSIAVAADVTILGTRAKCSLYVDALNPDRDAMVLDISNFSLGRLLLGVLAAGISIPHFLDLTIEKARVQYNMGPAFSILDEVYPSGIGFDVHNMCFFGIACISAKAMMKDSQDSLAWKAHTKPFDFFGIFELRGYPNPEDDPFVEIAINPQRATGSVAVAGSIQFLGIKASANLKITSFAIGVDFALSFFGLDAAVKCTCPTGFDPANPLGADMSFSVSFQSNFVQALVDAIARMLDLPSLADLLARAIDYLIKTAEQIVEKISEAEAEADRIISQAQKVLDDTLSAAKSALDAAGGMVNEAGQAVEKAAEDFGNFVSNAFGGWRRRRSSATDDYNSKSSQANTDFAAAKATAEQTRDQTIAGLKQTQAVVSGHRANFESSLSQLRSERRSIATNLVSSPAVEASGSLRAVFSGQSMPSMSIRGSVLSVGYSLSITVDFTDIGRVASAVAKGVMDSISDVFNIRL* # ORIGINAL: g2778.t1 original gene structure, not modified by PASA NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS gene 1 776 . - . ID=g2778;Name=g2778.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS mRNA 1 776 . - . ID=g2778.t1;Parent=g2778;Name=g2778.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS exon 1 776 . - . ID=g2778.t1.exon1;Parent=g2778.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS CDS 1 776 . - 0 ID=cds.g2778.t1;Parent=g2778.t1 #PROT g2778.t1 g2778 MHPRTKKKARRQNANANGKQARDSTPEHDATTPECKVTPGREGTHNDQQEAPSDAIASNSDGDAASMSSNSSNTRGLERQQRAARRTDLEAREAQFERMQEDEELAEREARLARREQDRVLKREAQNAREAHKRPDHRDDSARDELRERSDYRDDSARARFFHNYRIADVNVANLQLYDDRGTLMYDPLLDLQSRWATAHDTCRDQISFTKFTAELLNCFIRPHNALPDLVSSFSAIVTNARNNNAVKTYESFRDFYL # ORIGINAL: g2779.t1 original gene structure, not modified by PASA NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS gene 1138 1380 . - . ID=g2779;Name=g2779.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS mRNA 1138 1380 . - . ID=g2779.t1;Parent=g2779;Name=g2779.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS exon 1138 1380 . - . ID=g2779.t1.exon1;Parent=g2779.t1 NODE_4501_length_1532_cov_32.698_potentialcontaminant AUGUSTUS CDS 1138 1380 . - 0 ID=cds.g2779.t1;Parent=g2779.t1 #PROT g2779.t1 g2779 MSNLLPPSHSLYCNTLGSADSSDDISTASSNEGEAYYKATKAQCDAAYFDHLALTPSRYGPCHLCRQRDPAIAECRHVLT* # PASA_UPDATE: g9479.t1, single gene model update, valid-1, status:[pasa:asmbl_2675,status:12],[pasa:asmbl_2676,status:12], valid-1 NODE_1805_length_9149_cov_22.3576 . gene 5456 6890 . - . ID=g9479;Name=g9479.t1 NODE_1805_length_9149_cov_22.3576 . mRNA 5456 6890 . - . ID=g9479.t1;Parent=g9479;Name=g9479.t1 NODE_1805_length_9149_cov_22.3576 . five_prime_UTR 6853 6890 . - . ID=g9479.t1.utr5p1;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . five_prime_UTR 6550 6565 . - . ID=g9479.t1.utr5p2;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . exon 6853 6890 . - . ID=g9479.t1.exon1;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . exon 5913 6565 . - . ID=g9479.t1.exon2;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . CDS 5913 6549 . - 0 ID=cds.g9479.t1;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . exon 5456 5599 . - . ID=g9479.t1.exon3;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . CDS 5577 5599 . - 2 ID=cds.g9479.t1;Parent=g9479.t1 NODE_1805_length_9149_cov_22.3576 . three_prime_UTR 5456 5576 . - . ID=g9479.t1.utr3p1;Parent=g9479.t1 #PROT g9479.t1 g9479 MSPEALKGMYSDKSDVWSWAVTVFELYTFGASPYPGYDPASLARFLLSGGRLDQPDGCPAAVYALLTHCWEYDAVRRPSFAEICDRFTHIAAQKSVGDVSASVDAANGEADGGSATLTVPQISISADVLTTSVPSSQVRRRSQWAGADEDNFLAVAQQVHRLSNAYLPEDVSMTSSTTHMLCDNTEDGYDIPPDAEPASYLELVEVNLSETIAVLSSGI* # ORIGINAL: g9480.t1 original gene structure, not modified by PASA NODE_1805_length_9149_cov_22.3576 AUGUSTUS gene 7515 9149 . - . ID=g9480;Name=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS mRNA 7515 9149 . - . ID=g9480.t1;Parent=g9480;Name=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS exon 8658 9149 . - . ID=g9480.t1.exon1;Parent=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS CDS 8658 9149 . - 2 ID=cds.g9480.t1;Parent=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS exon 7865 8220 . - . ID=g9480.t1.exon2;Parent=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS CDS 7865 8220 . - 2 ID=cds.g9480.t1;Parent=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS exon 7515 7685 . - . ID=g9480.t1.exon3;Parent=g9480.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS CDS 7515 7685 . - 0 ID=cds.g9480.t1;Parent=g9480.t1 #PROT g9480.t1 g9480 NIAGGVNVTSAASTSPTALEIRISGSTATDILSSHSGGTLVSSALSVHVVDAYGSTTRPRGLVVRLAVAENEPLTTSDGSAWVSSPNALLSGSTEMIAPADGIASFSGVRIIGVPAKYWLVVYAPTSQAVLAGSIPVEITDCSDGYTSQPYAGTPFLTCETITVLGGLLAWRLRIAKKAASRATHAQFLEKHFKVEKGAQQLSSVEISRDDVDLMEALGQGEFGTVHKALLTAGDQPRLCAAKSMRDGTTYRERVEFIAEAEIMLGLQHPNVVSLIGVSVTVEPILILLEYAPNGNAKSFVQAIPSHRRGTAKTLSLLGKFSLQIAKGMSYLASNKIV* # ORIGINAL: g9478.t1 original gene structure, not modified by PASA NODE_1805_length_9149_cov_22.3576 AUGUSTUS gene 1 693 . - . ID=g9478;Name=g9478.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS mRNA 1 693 . - . ID=g9478.t1;Parent=g9478;Name=g9478.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS exon 449 693 . - . ID=g9478.t1.exon1;Parent=g9478.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS CDS 449 693 . - 0 ID=cds.g9478.t1;Parent=g9478.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS exon 1 161 . - . ID=g9478.t1.exon2;Parent=g9478.t1 NODE_1805_length_9149_cov_22.3576 AUGUSTUS CDS 1 161 . - 1 ID=cds.g9478.t1;Parent=g9478.t1 #PROT g9478.t1 g9478 MVYPLTPRHSGASLAVGAARAAKPAVVWMVTCLCAAHVCDAFRSSCPLLLAGSWNAAVIGSPSFAYSCDVANVSTGATSSRWMTFRVNLTATNGDVIKGEFAFDGVGLGAQLLLALGPVNGAAGSLSGNTTLAYN # ORIGINAL: g107.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 3132 5408 . - . ID=g107;Name=g107.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 3132 5408 . - . ID=g107.t1;Parent=g107;Name=g107.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 3132 5408 . - . ID=g107.t1.exon1;Parent=g107.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 3132 5408 . - 0 ID=cds.g107.t1;Parent=g107.t1 #PROT g107.t1 g107 MTDLYNVPEVYAPDDVRVDDLRARPPVPPEQFERPSPLVEMARRSLIHVDSRRRWLEPVNVVENELRLGRDPFFVKRNSSLVIVTHLNHKFITGAKITINRAEAITKKQPSQLRIWVGLVDGVPRALLTIRLSGNALADPANWRESSLHYLAPLATVMLANYRGDVREEDIRGVPINVINADHAVYACGSPSEFTILLPENQFALNQVESMGPNEWIGTMGTSIQLKHVMGVSIANVNANYPLSSDVLQGFQTIAAVTNNTYSFDVGTTFSSAQLNELRFGGDHVNVAVIKTNDPGFPNPNFYRIPLKRTYSDVSRVRLLHTTFPNTQYIINSKNNRLYWKNLADGTAVYSIELTPGNYSSADLVREMESRFASVVRVTTGQPHTFDVVINVPLSYVSFSSYFRTQLGNVPFGLLQTLIDNAAITHPNDDMQLLLEDSVLRNRLDARNLVYIVFPDHYVFEGFEIELSGVDKAFAGIPISVLNDRFRVAWSDRDEYIRLTRDGTITNPQPFQSMLFAISVDGLIPDPSKIVTGDTDVVIKELIPFSMLFNRPGTCGSLLGFKDVGKSYAITKFTTLLENRAVTYVNNKTYTNNVLRLSGEDYFFMVCPTLGYIEGTEPVANVFAKILQCGLPGTTTFNGIVGGDRVFSKKGRLRNLSELEFSMVDYQGESVDFNGSEHSFLLEITEIKAGFRPRATSESRFRSSSQSRFRSSSEFSRPQLSRGFHDSSSGSEGGEFELEGLEGLEGGGLEEIKLALTK* # ORIGINAL: g116.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 17995 19704 . - . ID=g116;Name=g116.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 17995 19704 . - . ID=g116.t1;Parent=g116;Name=g116.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 17995 19704 . - . ID=g116.t1.exon1;Parent=g116.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 17995 19704 . - 0 ID=cds.g116.t1;Parent=g116.t1 #PROT g116.t1 g116 MNDETLYGPRIHTISWREAFDKGFLTRYKIVTCSGSYAKQLLEQHHVKVDSSQQKNVLIATMIAKAFQEGLITHLLTFNRTNKRASDVLKAMKIILPQMGLANVELLITDGTSHKEEREEVIKKFKNSEIASLCSAKLLSEGMDITICDSVALCDPQKSMVAIVQAAGRALRLHDGKSHAYVLVPVVPVVQDQLEQTKGTATKTATKTATKTATKTATKSKAKHKLPESDSAFKEYATVISILRELCSNDVGMAYNGIVQAMGMEEANDNDGAESDADPLLMSLGEQTVDIKKLNRDLLLEVFDGGNDALKSLKNWESTRTQFVKFVNSNRMPRFDSVVPTEAALAHWVNVQRQEHTNGTLDGIKVKSLDSTMEWTWDNSQFDESGDESDDKSDESVGETKSNSTDSAPSDAVKQQEWLDMAKRFGDLRRLPTYDTNPDLFLWWRTQQFEFIRNRLSTEQVETLNIISGTWSTLTDVQQKGKTLNYIMTTLAKTLDYVEHHYGAWPKEDRDISKRTERNRDYVPFLKVRQNICDKKSPMTHGNAAFLKTLPAWEERSMDFAKRTAYELD* # ORIGINAL: g110.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 9964 11166 . + . ID=g110;Name=g110.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 9964 11166 . + . ID=g110.t1;Parent=g110;Name=g110.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 9964 11166 . + . ID=g110.t1.exon1;Parent=g110.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 9964 11166 . + 0 ID=cds.g110.t1;Parent=g110.t1 #PROT g110.t1 g110 MVYQFVSEVTFDDNNKLVVGKYCRRGKVVQLAVDMTTRKVYGMIGKRLEEVSEKDTVPTYNVGVLGCTGLVGQYLIGMLQRHPWFCVKFIGASERSAGNTLREVLGSSVNGNCSTDNPALDLIVVECTPEKFQGCDFVLSALDGDSTGKIEQDFVRAGIPVFSNAMNHRMDPGVPLIVPTANSDHINAAGDGGFIVCNSNCSVSGVAVALKAVHDAFQLDKVHVTTMQAVSGGGIRPGVAALDILGNVIPFIDGEEHKIETELKKILGQRICKTIEDGTFVVSAQCNRVGVIDGHMACVGFSVKRPNVTLEDIENTIRGTATGLSLPSAPQHIIVVRDEVNRPQPRLDVHEGNGMTTVVGRIRQCPLFGFKMVVLCHNVVLGAAGSCIMNAELAVAAHKL* # ORIGINAL: g112.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 14815 15321 . + . ID=g112;Name=g112.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 14815 15321 . + . ID=g112.t1;Parent=g112;Name=g112.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 14815 15321 . + . ID=g112.t1.exon1;Parent=g112.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 14815 15321 . + 0 ID=cds.g112.t1;Parent=g112.t1 #PROT g112.t1 g112 MNTNLCVILVALGLAFLYLTYGPSSGNAPISNSGILKKTDSNQDSTQEQDSSPPMSTVAEVFQQGPPPLKDANNEVPWLNKSAMVPSSKDLLPPQSKNPWTDTNPEVPTNPELAGMNFITGHHVGEMTTSGLRNPSRDIRPVPPITLMPVGPFNAGTVDPARAYTLNL* # ORIGINAL: g109.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 7722 9908 . - . ID=g109;Name=g109.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 7722 9908 . - . ID=g109.t1;Parent=g109;Name=g109.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 7722 9908 . - . ID=g109.t1.exon1;Parent=g109.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 7722 9908 . - 0 ID=cds.g109.t1;Parent=g109.t1 #PROT g109.t1 g109 MQVVKFGGDCMSCATQIYKCAGIVQALQGCIIVVSAARGVTDRLLTGRANEVVHIYDCILQKLHIDKQEICSYEILSTAPAYAGEVLSAEIFAYVLRRMNVNAAPVNAWSVGISDDVSKNLALSRRRLDSSWLRTMVRVGIVPVVTGFAALSESGDSVTCLKRGGSDTSAVIVGACLEAVSIVLFKEVDGIRTVDPKEPAGWTDELVTNMSFDQAIGCATHGSRIVASDAVILARDNNLSIEIRWIDEPFVPKTVISSALGSQIIYTKSDGVLHAIHPDGTAVNYFMITRLRGRMDGITLSNRVESNARTYVRKFPKEFTSGDGIWLRDSYGVEYFDALACAGALPLGHNHSVVKEAMRRYVESSMPQQMLDLATPAKTAYIREVYRWLPEEMSDFKIQFCGPTGSDAVEAAMKLTRVATGRRTIIAFDGGYHGQTQAALAAMGNTGGKSQLNLPSGDIQFLPYPHPYHSPFNLDETLTVTASLALLEKTFSDPESGVVKPAAVILEAIQGEGGVVPAPIEWLQGVREITRQHGVPLIVDEVQAGWARSGRKFAFNYAEIIPDVVVLSKAAGGGMPMALIVYNASLDKWTAGCHTGTFRGNQIAMVTGEAVLRHMRENAVWEHAEEVGEYLKSKLESLKGKHAFIGDVRGKGLMLGVQIVKTGKTCDGDLAMKIQKRCFENERLIIERGGRHGSVLRFLTSLLITKGQVDDLVDRLERVFHQGDNLSP* # ORIGINAL: g113.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 15591 16127 . + . ID=g113;Name=g113.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 15591 16127 . + . ID=g113.t1;Parent=g113;Name=g113.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 15591 16127 . + . ID=g113.t1.exon1;Parent=g113.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 15591 16127 . + 0 ID=cds.g113.t1;Parent=g113.t1 #PROT g113.t1 g113 MHLRDRYLERFQEWLRDDVARRLEGSIYDFATKCVASQGARGGEISATMLNDLVCKVYEDRATTFCENLDPSGHVNNSKLWAMMEADEVADDYGNHIPLEKVAFLHPKCYHEEAWSKINAKRNRFIEDSQKQIWSEAFECGKCKAKMCTVYLEQRRSADEATTQIVTCKKCGNQWCQS* # ORIGINAL: g114.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 16637 17302 . - . ID=g114;Name=g114.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 16637 17302 . - . ID=g114.t1;Parent=g114;Name=g114.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 16637 17302 . - . ID=g114.t1.exon1;Parent=g114.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 16637 17302 . - 0 ID=cds.g114.t1;Parent=g114.t1 #PROT g114.t1 g114 MSGNLIQIPYRFVFSNPILSNNVLLREVQELVARETVGESEIRQMMKRIRKVWNASPYEKQLDMKLIDLLHARWYLRPLEISSTESTNGYVLYDTFENIMSYDIYSELKGLWLENEGVPLERFQAAYKLLACSDWSKMDEHGKSFGGQFWNAPVGTEERSNAYTLTGQKNCNKLYELSPYPKRVVLETVRLGCGNRMECVRYSNYICEWVRRKIIQEGVEF* # ORIGINAL: g111.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 12593 14491 . - . ID=g111;Name=g111.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 12593 14491 . - . ID=g111.t1;Parent=g111;Name=g111.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 12593 14491 . - . ID=g111.t1.exon1;Parent=g111.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 12593 14491 . - 0 ID=cds.g111.t1;Parent=g111.t1 #PROT g111.t1 g111 MAPIAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFNESERLIGDAAKNQTAMNPENTVFDAKRLIGRRFDDPTVQADMKHFTYRVVNKNGQPHVQVNYKGETKTFSPEEISAMVLIKMKETAEAFLGIPVIDAVVTVPAYFNDAQRQATKDAGVIAGLNVKRIINEPTAAALAYGLDKKSRGEMNVLIFDLGGGTFDVSILTIDDGIFEVKSTAGDTHLGGEDFDNRLVNHFADEFKRKHKKDITVNSRALRRLRTACERAKRTLSSSTQATIEVDSLFEGIDFNTSITRARFEELCSDLFRGTLDPVEKALRDAKMDKAQIHEIVLVGGSSRIPKVQKLLQDYFHGKELNKSVNPDEAVAYGAAVQAAILSGDTSSAIQDLLLIDVVPLSLGLETAGGVMTNIIDRNTTIPTKKTQTFSTYADNQPGVLVKVYEGERGMTKDNNLLGTFELSGIAPAPRGVPQIEISFDIDSNGILNVTAKDKASNQTNHITIKNDKGRLSKEDVERMVKEAEAFKADDDAARQRVSARNSLDALVSQAKESIDKLPAATEEQKKDVHAQCAKIRTWLAEHEDASCEEYEEKQRELEKVIHPIMGAASAPPPTPSAAPSASSASSGPQVEEVD* # ORIGINAL: g115.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 17471 17875 . + . ID=g115;Name=g115.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 17471 17875 . + . ID=g115.t1;Parent=g115;Name=g115.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 17471 17875 . + . ID=g115.t1.exon1;Parent=g115.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 17471 17875 . + 0 ID=cds.g115.t1;Parent=g115.t1 #PROT g115.t1 g115 MDWNKWTPDRIRVELSVISKLKEGGRFALRNERLSIEGDIWWLTSLVRTIYHESRAKTIKHIRNVISTAITYITQNDNDQRFCTKLVEALTGLRNLSDTYRQDAVILSELQNIIENIEQCVEGLPGGCAPPTDA* # ORIGINAL: g108.t1 original gene structure, not modified by PASA NODE_509_length_22132_cov_43.7199 AUGUSTUS gene 6183 7145 . + . ID=g108;Name=g108.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS mRNA 6183 7145 . + . ID=g108.t1;Parent=g108;Name=g108.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS exon 6183 7145 . + . ID=g108.t1.exon1;Parent=g108.t1 NODE_509_length_22132_cov_43.7199 AUGUSTUS CDS 6183 7145 . + 0 ID=cds.g108.t1;Parent=g108.t1 #PROT g108.t1 g108 MDELFGPVILLPFGSSGLIKVTGDSVIRTRLIFKLATEFLTVTVGNSTFTIPTVIAKRFQCSVFGSLLRRNMNDASFPDADETAFEQIIMPIIRHELDEAAFNCSELSTCDVDSTLKFWGFPSLFDNLYNAAFVDVYEESVHAVMVIRNLASKMWERYEAKKDQMQSVQTSLSFMRRRPFMICLDEFRKVEGGKVYDMLNNLYPECVKLRHVFLRLPLIKTARGSEIHCVDLVGSVDINDVMDKEDPRKLSNNIVNALEANCAVQQKFDDPQLDRPTWSSGTCKFDKLKECFDNPLYESSDYTVYCVSYLCAFSRAPLVH* # ORIGINAL: g6391.t1 original gene structure, not modified by PASA NODE_2787_length_5122_cov_52.6572 AUGUSTUS gene 285 3624 . - . ID=g6391;Name=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS mRNA 285 3624 . - . ID=g6391.t1;Parent=g6391;Name=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 3622 3624 . - . ID=g6391.t1.exon1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 3622 3624 . - 0 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 3419 3479 . - . ID=g6391.t1.exon2;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 3419 3479 . - 0 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 2798 3213 . - . ID=g6391.t1.exon3;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 2798 3213 . - 2 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 2486 2677 . - . ID=g6391.t1.exon4;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 2486 2677 . - 0 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 1432 2163 . - . ID=g6391.t1.exon5;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 1432 2163 . - 0 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 885 1117 . - . ID=g6391.t1.exon6;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 885 1117 . - 0 ID=cds.g6391.t1;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS exon 285 660 . - . ID=g6391.t1.exon7;Parent=g6391.t1 NODE_2787_length_5122_cov_52.6572 AUGUSTUS CDS 285 660 . - 1 ID=cds.g6391.t1;Parent=g6391.t1 #PROT g6391.t1 g6391 MQAMRQLSAPNGRRIHSKQRSRGQHELSPGHHRNRSEGFEYTNDSLPIDLNRNICDNLGDILFEMSKDTLSPEHKLSHLNNLTKLVKSTDQPLDHYYPLDEILECLLSLAVDSVKEVSGAVHLKNAPTIVEGMDGGHIVLDCVGSLFEALEKRREYVHAHVRAGALRVCRYVVHDMDSIRAFLKFHFDAFLCISLERTIDFEVERTQALKLARHIAEIQATLMPRSIVASIVAIADNSEDRFSRVCLETLTELAVRCPKIVAQADGFRTILRSILLTNNRKLVDTLCLAILCVVNRSETRRFLRIDTELESVLYPFTDEHYRFGDIETAGKQGPSSMMVNNPSAMRFASSKMALTSLLRSWGGLVCLASNASGIRSLIDVLWLRNRDTMLAVMDVIFDVLGVEAPEWTEDFMQALGRGLFYHRPSRKSRSSSSDGEGPSLPPLVSDHDLAKHYKAALIAAFANAGLVEALIEVIRCEDKTISVRGTVLLGEYLELANALLPRVIATAIQSVPSLVAIAAAATTEPSERSRAFTALNNLGRLHQTRKNDAETFPVPHWSSYGLHLILEHARRLVPQETLPPLDRSRGRIDQMKALLDLDIDDAYFQALLRDSGVVVTKDLQKWNWDIIWELIVGPLRNTRRLEEAVNAKFIKRLLSFFRPSRQLFSEQTVEE # ORIGINAL: g12368.t1 original gene structure, not modified by PASA NODE_2239_length_7116_cov_62.8881 AUGUSTUS gene 2962 4997 . - . ID=g12368;Name=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS mRNA 2962 4997 . - . ID=g12368.t1;Parent=g12368;Name=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 4995 4997 . - . ID=g12368.t1.exon1;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 4995 4997 . - 0 ID=cds.g12368.t1;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 4733 4880 . - . ID=g12368.t1.exon2;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 4733 4880 . - 0 ID=cds.g12368.t1;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 4371 4518 . - . ID=g12368.t1.exon3;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 4371 4518 . - 2 ID=cds.g12368.t1;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 3358 3435 . - . ID=g12368.t1.exon4;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 3358 3435 . - 1 ID=cds.g12368.t1;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 2962 3103 . - . ID=g12368.t1.exon5;Parent=g12368.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 2962 3103 . - 1 ID=cds.g12368.t1;Parent=g12368.t1 #PROT g12368.t1 g12368 MASLFTVKAVLVLDNDGERVLCKHYDNTYPTTKEQRTFEKALFQKTHRANAEIIMYDGVTCVYRSNVDLFFYVVGSADENELILVSVLNTFYDTIAQLLRNQVEKRVLLDNLDGVLLALDELIDGGVILECESSAIAQRVSLRAVEEVPISEQSISQALQTARDQITRSLLK* # ORIGINAL: g12367.t1 original gene structure, not modified by PASA NODE_2239_length_7116_cov_62.8881 AUGUSTUS gene 169 2682 . + . ID=g12367;Name=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS mRNA 169 2682 . + . ID=g12367.t1;Parent=g12367;Name=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 169 264 . + . ID=g12367.t1.exon1;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 169 264 . + 0 ID=cds.g12367.t1;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 391 978 . + . ID=g12367.t1.exon2;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 391 978 . + 0 ID=cds.g12367.t1;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 1135 1909 . + . ID=g12367.t1.exon3;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 1135 1909 . + 0 ID=cds.g12367.t1;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 2114 2191 . + . ID=g12367.t1.exon4;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 2114 2191 . + 2 ID=cds.g12367.t1;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS exon 2459 2682 . + . ID=g12367.t1.exon5;Parent=g12367.t1 NODE_2239_length_7116_cov_62.8881 AUGUSTUS CDS 2459 2682 . + 2 ID=cds.g12367.t1;Parent=g12367.t1 #PROT g12367.t1 g12367 TTEDLTKQLLMMEDSQTSKRYKFGILYCKEGQTHESDMFGNETGSPAFEEFLSAMGDRIELLGWNKFRGGLDNKRNLSGEMSVYATLPRGYEIMFHVSTLMPFNKNDRQQLERKRHIGNDIVTIVFTEGSTPFSMKTISSHFLHIFAVVRRETAADGKTMYRVHVGSNTKVPAFGPALPSPPLFTHADIREFLLIKLINGETSTYTSETFQQRSVRTLTNILKYIHEKFYESGTRSNPNKRMNMVPQTLRLDGASALAALANDMSMYDVSTVISDLPHVLQCCTRGCGGALVIGTDYGLYSFSPATAELVELPTSKRRSYVRVVALEEIDSLVVCGARKGGKNHVFSYRLSEALRLPGQSGGRGRGTLKGTKLTDARMAHDMAAAPIAGKSAVLVVAVRRSVLVYQWDVGAREYVKQREIALAESVATMLLREPTHVLAWLVTGELFRVTLDGATVAQIELPVHVAAKVAPIAVSRIESDIALTNNNITFFVPDASPARELSIKWNSVPLALAYTIPPHFLAFTPTSVEVRSIVNGAFLQALPFQCSHFLLHDDKAKALYVANNVTDAEGSSACSLHRIAYSEERA* # PASA_UPDATE: g12369.t1, single gene model update, valid-1, status:[pasa:asmbl_3851,status:12], valid-1 NODE_2239_length_7116_cov_62.8881 . gene 5865 7009 . + . ID=g12369;Name=g12369.t1 NODE_2239_length_7116_cov_62.8881 . mRNA 5865 7009 . + . ID=g12369.t1;Parent=g12369;Name=g12369.t1 NODE_2239_length_7116_cov_62.8881 . five_prime_UTR 5865 6088 . + . ID=g12369.t1.utr5p1;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . exon 5865 6200 . + . ID=g12369.t1.exon1;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . CDS 6089 6200 . + 0 ID=cds.g12369.t1;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . exon 6525 6578 . + . ID=g12369.t1.exon2;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . CDS 6525 6578 . + 2 ID=cds.g12369.t1;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . exon 6683 6758 . + . ID=g12369.t1.exon3;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . CDS 6683 6758 . + 2 ID=cds.g12369.t1;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . exon 6913 7009 . + . ID=g12369.t1.exon4;Parent=g12369.t1 NODE_2239_length_7116_cov_62.8881 . CDS 6913 7009 . + 1 ID=cds.g12369.t1;Parent=g12369.t1 #PROT g12369.t1 g12369 MHSMHTTLECRMAPSVKSFPPHAHYGGSVIDAHGVERTPVGLAPPVVTAGLAHVDGPLVTPESESCKRLHGKHWLEADDPREDGMCCLIRIFCMCILTYVVCDVPWSCHLGT* # PASA_UPDATE: g8441.t1, single gene model update, valid-1, status:[pasa:asmbl_7482,status:12], valid-1 NODE_4628_length_1391_cov_28.4647 . gene 315 1223 . - . ID=g8441;Name=g8441.t1 NODE_4628_length_1391_cov_28.4647 . mRNA 315 1223 . - . ID=g8441.t1;Parent=g8441;Name=g8441.t1 NODE_4628_length_1391_cov_28.4647 . five_prime_UTR 1191 1223 . - . ID=g8441.t1.utr5p1;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . exon 1113 1223 . - . ID=g8441.t1.exon1;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . CDS 1113 1190 . - 0 ID=cds.g8441.t1;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . exon 940 982 . - . ID=g8441.t1.exon2;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . CDS 940 982 . - 0 ID=cds.g8441.t1;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . exon 632 720 . - . ID=g8441.t1.exon3;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . CDS 632 720 . - 2 ID=cds.g8441.t1;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . exon 315 446 . - . ID=g8441.t1.exon4;Parent=g8441.t1 NODE_4628_length_1391_cov_28.4647 . CDS 315 446 . - 0 ID=cds.g8441.t1;Parent=g8441.t1 #PROT g8441.t1 g8441 MPGGSVYSLAITPKLLISGTYENSIHVYDIDNHTHQAILEGHGGTIYALAVMGVAGQSRLFSGSYDNTIKVWNLETYQLVQTLVRHGSCVDTLAVAKGRLFSGSADNSIKVTD* # ORIGINAL: g10611.t1 original gene structure, not modified by PASA NODE_1425_length_11421_cov_42.7605 AUGUSTUS gene 6349 8444 . + . ID=g10611;Name=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS mRNA 6349 8444 . + . ID=g10611.t1;Parent=g10611;Name=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 6349 6489 . + . ID=g10611.t1.exon1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 6349 6489 . + 0 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 6619 6828 . + . ID=g10611.t1.exon2;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 6619 6828 . + 0 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 6952 7113 . + . ID=g10611.t1.exon3;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 6952 7113 . + 0 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 7315 7417 . + . ID=g10611.t1.exon4;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 7315 7417 . + 0 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 7597 7690 . + . ID=g10611.t1.exon5;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 7597 7690 . + 2 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 7812 7922 . + . ID=g10611.t1.exon6;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 7812 7922 . + 1 ID=cds.g10611.t1;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 8243 8444 . + . ID=g10611.t1.exon7;Parent=g10611.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 8243 8444 . + 1 ID=cds.g10611.t1;Parent=g10611.t1 #PROT g10611.t1 g10611 MADPALSFDYEADERWRRYINSLEFASTGPSSEALFKLKRRWYKASIDPAYDASVYNSAPNNNTASSAASDSASRHSTQSAGQSQQQPGFEPRPNPTAQHPAQQPHATVGDHARHNPAAYVRFLSTLFLLLNAILYVAFMLFNGEFSYDCYRRAFKGALLAYAVSLYEAHWPIQFSREALARVVMDSNCQYLVYSILFLGQPPMLMAVTPVFVYGVYSATDFGRTVAQVARLEPAQRMLTQAQAFLAPRTAVVMDAVASMEIALFPFMLMHLVLGQMGLSSLVLYFMFLRTRYFTSPNMQTQFRQLRLKADALAATHAPAAVRPLYARVVSFLSSLGEMQ* # ORIGINAL: g10609.t1 original gene structure, not modified by PASA NODE_1425_length_11421_cov_42.7605 AUGUSTUS gene 1685 3102 . - . ID=g10609;Name=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS mRNA 1685 3102 . - . ID=g10609.t1;Parent=g10609;Name=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 3067 3102 . - . ID=g10609.t1.exon1;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 3067 3102 . - 0 ID=cds.g10609.t1;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 2535 2917 . - . ID=g10609.t1.exon2;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 2535 2917 . - 0 ID=cds.g10609.t1;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 2029 2311 . - . ID=g10609.t1.exon3;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 2029 2311 . - 1 ID=cds.g10609.t1;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 1685 1918 . - . ID=g10609.t1.exon4;Parent=g10609.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 1685 1918 . - 0 ID=cds.g10609.t1;Parent=g10609.t1 #PROT g10609.t1 g10609 MGERKVLNKYYPPDFDPAKIPRMRKPKDLQFKVRLMAPFNMRCVNCYDYIYKGKKFNAMKETVQDEEYLGIRIFRFYIKCPKCSGDITFKTDPQNADYICEQGATRNFEPWRQRDEAIEAVKKKREEEEENNPMKALENRTLDSKREMEILDALEELKDINSRHATLDHDALLAAHARQDVLEGRTAADNDADADEALVRAAFAGREDGVRRIDESDSDDEDGRGGASSLPPAKRHKADDSFAPPPPPMAATAIPLKTKLASLIRKPTPKGPPPPPPPSAQPAPPAPAVTSGGAAVLTSLLAGYGSDDDSD* # PASA_UPDATE: g10612.t1, single gene model update, valid-1, status:[pasa:asmbl_1554,status:3], valid-1 NODE_1425_length_11421_cov_42.7605 . gene 8510 10090 . - . ID=g10612;Name=g10612.t1 NODE_1425_length_11421_cov_42.7605 . mRNA 8510 10090 . - . ID=g10612.t1;Parent=g10612;Name=g10612.t1 NODE_1425_length_11421_cov_42.7605 . five_prime_UTR 9792 10090 . - . ID=g10612.t1.utr5p1;Parent=g10612.t1 NODE_1425_length_11421_cov_42.7605 . exon 9075 10090 . - . ID=g10612.t1.exon1;Parent=g10612.t1 NODE_1425_length_11421_cov_42.7605 . CDS 9075 9791 . - 0 ID=cds.g10612.t1;Parent=g10612.t1 NODE_1425_length_11421_cov_42.7605 . exon 8510 8974 . - . ID=g10612.t1.exon2;Parent=g10612.t1 NODE_1425_length_11421_cov_42.7605 . CDS 8699 8974 . - 0 ID=cds.g10612.t1;Parent=g10612.t1 NODE_1425_length_11421_cov_42.7605 . three_prime_UTR 8510 8698 . - . ID=g10612.t1.utr3p1;Parent=g10612.t1 #PROT g10612.t1 g10612 MFGENKAWGSSLAVTNTIAAPFGSDASPPQSPRSPLTLNDEDGARRVSADVLMSVVRPQLQGPLSVVRCRGTGGQGRCMQVRDAVSGREIIVKQVSIENGLNSSRAQALAREAVFLDSLVHPHIIESYGVALDDTSATLGLQLEVMDCTLTEMLRRAGGALEERVIAIYLRQLLAALEYIHERHIVHLDVKPENLLVSVDGDIKLADFGLARVFPTAELHKKGFFREAYMGTFEYMAPEVVKPGEYGVGCWSDIWAVGCVAMEMATGRNPWGDGAVFTTLQKIVQPGYFPPVPPSCSDAFAAFVARCFNRQPQLRPTAAELLQDPFLAVE* # PASA_UPDATE: g10608.t1, single gene model update, valid-1, status:[pasa:asmbl_1555,status:12], valid-1 NODE_1425_length_11421_cov_42.7605 . gene 204 1603 . + . ID=g10608;Name=g10608.t1 NODE_1425_length_11421_cov_42.7605 . mRNA 204 1603 . + . ID=g10608.t1;Parent=g10608;Name=g10608.t1 NODE_1425_length_11421_cov_42.7605 . exon 204 592 . + . ID=g10608.t1.exon1;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . CDS 204 592 . + 0 ID=cds.g10608.t1;Parent=g10608.t1;5_prime_partial=true NODE_1425_length_11421_cov_42.7605 . exon 685 768 . + . ID=g10608.t1.exon2;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . CDS 685 768 . + 1 ID=cds.g10608.t1;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . exon 869 945 . + . ID=g10608.t1.exon3;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . CDS 869 945 . + 1 ID=cds.g10608.t1;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . exon 1139 1603 . + . ID=g10608.t1.exon4;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . CDS 1139 1206 . + 2 ID=cds.g10608.t1;Parent=g10608.t1 NODE_1425_length_11421_cov_42.7605 . three_prime_UTR 1207 1603 . + . ID=g10608.t1.utr3p1;Parent=g10608.t1 #PROT g10608.t1 g10608 QVARAIPFGTMVVLACIGLFVILPLTLVGTVLGRNIASNADHPCRINPVPRPIPEKKWFMEPLVIIALGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVYIILVIVTVCVTIVCTYFLLNAEDYRWHWTSFLAAASTAVHIYVYAVYYFLSKTKMYGLFQTTFYFGYMALLCVGMGILCGTVGFAGTNVFVRQIYRNVKID* # ORIGINAL: g10610.t1 original gene structure, not modified by PASA NODE_1425_length_11421_cov_42.7605 AUGUSTUS gene 3375 5828 . - . ID=g10610;Name=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS mRNA 3375 5828 . - . ID=g10610.t1;Parent=g10610;Name=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 4875 5828 . - . ID=g10610.t1.exon1;Parent=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 4875 5828 . - 0 ID=cds.g10610.t1;Parent=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 4641 4694 . - . ID=g10610.t1.exon2;Parent=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 4641 4694 . - 0 ID=cds.g10610.t1;Parent=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS exon 3375 4511 . - . ID=g10610.t1.exon3;Parent=g10610.t1 NODE_1425_length_11421_cov_42.7605 AUGUSTUS CDS 3375 4511 . - 0 ID=cds.g10610.t1;Parent=g10610.t1 #PROT g10610.t1 g10610 MEVAHAPTTVSVPRGPGDRDRDAHVTGGDWTAGQAGPWDHSTHTEPAKPPTKAPRPSVFPFENTSEISQFGDFRFNVNLAHGRPSFGDVFGAGEAQSTRTETADNQGDAPMNEEGEGSVDACVNVNASTNEVMSDMWGSAVDAEDAPAFAWDEHPTNRGAAVDPFGMDECGPQTGAGNGELEGPGAPATASVAPHAKHRRSSYGGDLSRGTALIVGADEGDAAADGPPPTDCDSCARLYARLRDARQSHAQKECALSIEIERLTTLVGDAMREMAADSRQSAAAIERVRMDADAQRSQFETELAATRALLHKREDDLQSAILAAERDRDMLKGGIEALKTEIVRLRAHPSLRGTASPSLSRTVSRSSSMALGQSDETATATASSADAEHVHSPRTPSAVPQTRAETADEWDQKERHLRSVIDKLRRGIEAAEERHQAELEEMSTARDAAVAMIADLKDECVRLQQLSEGEGGGDASFQAAELTDLRAAHAACMGEIESLGAQVVALHDEIALAARRAADERLRFEEERSELVHRCEVLTSVAEEFAEEMGEAKLAKESLLVARAKGLQQLAMYGMRSKKAAGKKNPQSRLASEVVTLGQRLAEALADRQIEVARLSELNRTKDGTIDSLRRRLAEAEAAVARAAQAHNPHQHPAQAQAQAQQHQHAPAPSSVGGSVPRSVPPVAARPPLAVTRTVVDDPLDHVDLSAGGFGRRS* # PASA_UPDATE: g8861.t1, single gene model update, valid-1, status:[pasa:asmbl_2351,status:12],[pasa:asmbl_2352,status:12],[pasa:asmbl_2353,status:12], valid-1 NODE_1697_length_9657_cov_39.3028 . gene 6396 9455 . + . ID=g8861;Name=g8861.t1 NODE_1697_length_9657_cov_39.3028 . mRNA 6396 9455 . + . ID=g8861.t1;Parent=g8861;Name=g8861.t1 NODE_1697_length_9657_cov_39.3028 . five_prime_UTR 6396 6521 . + . ID=g8861.t1.utr5p1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . exon 6396 6620 . + . ID=g8861.t1.exon1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . CDS 6522 6620 . + 0 ID=cds.g8861.t1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . exon 6826 7393 . + . ID=g8861.t1.exon2;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . CDS 6826 7393 . + 0 ID=cds.g8861.t1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . exon 7960 8879 . + . ID=g8861.t1.exon3;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . CDS 7960 8879 . + 2 ID=cds.g8861.t1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . exon 9133 9455 . + . ID=g8861.t1.exon4;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . CDS 9133 9183 . + 0 ID=cds.g8861.t1;Parent=g8861.t1 NODE_1697_length_9657_cov_39.3028 . three_prime_UTR 9184 9455 . + . ID=g8861.t1.utr3p1;Parent=g8861.t1 #PROT g8861.t1 g8861 MASSKRQEEKNMKILRDLVKKPENKRCFECDSLGPTYVNLFNNTFVCVNCSGVLRGFEHRLKSISMATFKDEEIAALQRDGNDVGRAVWLGRWNAREEQMPDGKDPNRLKEFIRLKYQAKKWYVPREHAQVAVRDEPGVQPAQNLFGAQQLPRLVVEPGVAAQGRPASNSFNGNAPASNNNGDIFGAIAGQKPAADFFGGGAPASNDFFGGAPQQQQQQQRADDWTQQPLPVGPQKLPVSSAVAPAQPAPAQQKAAPKNDFDSFVAEVSRPQTQEDKYTAIKDLLGAVSFNSAPAQPPQQQQQGWGAAPQPQAQPQQQQGWGAAPQPQAQPQQQQGWGAAPQPQAQPQQQQGWGAAPQPQAQAAHDPYAAFGATAQPQQPSGGIFGAPAASTSAAPAGGIFAQASPFGLPSAAPAAAPVQAQQPQANPFGGLGGAPTAVPAVADPSNPFGMPTTKSTASNAFNDLSPFGGKPVAANSPQFRPSQPPAAAAPAPAAANPFGGLGGLGGLGAPVAAPAANPFGAPVAANPFGGIQAAPAAQNNNPFF* # ORIGINAL: g8860.t1 original gene structure, not modified by PASA NODE_1697_length_9657_cov_39.3028 AUGUSTUS gene 1110 4663 . - . ID=g8860;Name=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS mRNA 1110 4663 . - . ID=g8860.t1;Parent=g8860;Name=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS exon 4249 4663 . - . ID=g8860.t1.exon1;Parent=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS CDS 4249 4663 . - 0 ID=cds.g8860.t1;Parent=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS exon 3754 4025 . - . ID=g8860.t1.exon2;Parent=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS CDS 3754 4025 . - 2 ID=cds.g8860.t1;Parent=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS exon 1110 3455 . - . ID=g8860.t1.exon3;Parent=g8860.t1 NODE_1697_length_9657_cov_39.3028 AUGUSTUS CDS 1110 3455 . - 0 ID=cds.g8860.t1;Parent=g8860.t1 #PROT g8860.t1 g8860 MENYEDLFDPPYTGRRQRPRTVPDEAVVRAEPSLGDGSATVHTRTHMRLQRRHRAPAISAIANRRRMNQNNAPPQQPEYSPTTFWMPDYLPAEPDYTGPYYFPNSTLSPTYSPSLPVFDFDGVDYRGAMQGGLDRRPMQSDMVASPIVTNVDVSKVVSTSLTAFIPQMETTKKRKRSVGERREGHAPSGVASLTTTTGWLGTIVRGVTATVAPADAAFNARPRSREDGVAFATRRLFVSRGSAPVDDTATLPPDAHTCPPHEIRCVAIGPNNRLVIVGKSTAHILCNGIICATWDFSTGYVSAATGTTRMCSAVVDAKATLSTAVLLTTDGIVLSWDWNAPAPQCHPRFAALKSAAPDVTAVFLATSTLLTSVITRTSNAADAAFALHTWMDNTVGHVLTELSVDTARTRIEVANALLSGTPVHIGASELATTVVMDDGDVRIWGVCLQSITADASECEVASVMPMTRVSVVVDDAAAVSGGDIALGFSGGFPRLHVPHVTPAMMCELSGIPMESCAEKGGVNNIAACNSINSTNSDNSTHKNQHCSRSNDSGEEYNRFGRQGVFAVREQPSDLSEANNSHASPTLVAHAVPIANMTVKAFVLGVSQTHATVAVASDWRSNPAADAPRNLDLDRATESTLLIPLANVLPPNQRARIHPAFERAIVANHSVPGINSLHSNRRPVRVLAASPSWEGVHVVYAVEGMDGVQEDAAVYHAAVSFPDPASQTACRTSVLTRLWNCSGTVSLAVFGTRVHVHSSASLSLTSLEVRPDGQVNATESSIPIASFSAWPLGDSQASMAGVAVGTQWFVDVVASGDIGRVREALSVSTPDATALLSHCTKNGNALHAHVQLSMDAAIANELVSHERLSLVKEMAAVKNRQGTTPVELAMCAKDGCGMLLLKALVERNCLAVAEVGRAFASAACSALCTPITWPLKWRSNGLPALSETAAQHDNTIRLDATQRVCVARIAREDTAPDAFTNGAVVRFEFTLKPNSGVSHARLSLCTSNDAG* # ORIGINAL: g7133.t1 original gene structure, not modified by PASA NODE_3912_length_2523_cov_32.1046 AUGUSTUS gene 50 2018 . - . ID=g7133;Name=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS mRNA 50 2018 . - . ID=g7133.t1;Parent=g7133;Name=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS exon 1772 2018 . - . ID=g7133.t1.exon1;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS CDS 1772 2018 . - 0 ID=cds.g7133.t1;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS exon 1574 1634 . - . ID=g7133.t1.exon2;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS CDS 1574 1634 . - 2 ID=cds.g7133.t1;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS exon 1252 1369 . - . ID=g7133.t1.exon3;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS CDS 1252 1369 . - 1 ID=cds.g7133.t1;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS exon 417 1088 . - . ID=g7133.t1.exon4;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS CDS 417 1088 . - 0 ID=cds.g7133.t1;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS exon 50 189 . - . ID=g7133.t1.exon5;Parent=g7133.t1 NODE_3912_length_2523_cov_32.1046 AUGUSTUS CDS 50 189 . - 0 ID=cds.g7133.t1;Parent=g7133.t1 #PROT g7133.t1 g7133 MQSRDQSRASERSVSSAGYQGAPVSGQPSTRDGANRDAAGAQERARSAPSRDAPALSGHTDDRHVAFTRTDRIERDRDSPRADRSAQSASISATAHSAHENTAAKRRLDETYTKPVVVPTNPNIIASSRDRPTGLDMHAFLPGKGGAAEHLRSASGAPVQTATHHVPSTPDRLLREREMAEREQLDRDKERIIRERERLERERERLERLERERAERDKLDKERAERERQEKERIERELAARHLQSARTESRSSVSAVDSFGHPQSRPDTANSVRNLKSAGGDRDIPPSRDRVRDAASVGGGGFGGAGALPGHGGHSGASYFGAEEDMIGGLIGGHASLVKTIGNRLNNLRVVRGMWANRNYKGAVEALADMGDVGAAVDVLSILNMRPSLWTLDMAVLMGPLMQEMLASRHE # ORIGINAL: g5724.t1 original gene structure, not modified by PASA NODE_3033_length_4479_cov_52.9896 AUGUSTUS gene 73 4202 . + . ID=g5724;Name=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS mRNA 73 4202 . + . ID=g5724.t1;Parent=g5724;Name=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 73 167 . + . ID=g5724.t1.exon1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 73 167 . + 0 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 378 465 . + . ID=g5724.t1.exon2;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 378 465 . + 1 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 747 881 . + . ID=g5724.t1.exon3;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 747 881 . + 0 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 1148 1235 . + . ID=g5724.t1.exon4;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 1148 1235 . + 0 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 1402 1561 . + . ID=g5724.t1.exon5;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 1402 1561 . + 2 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 1821 1909 . + . ID=g5724.t1.exon6;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 1821 1909 . + 1 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 2165 2338 . + . ID=g5724.t1.exon7;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 2165 2338 . + 2 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 2644 2822 . + . ID=g5724.t1.exon8;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 2644 2822 . + 2 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 2979 3072 . + . ID=g5724.t1.exon9;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 2979 3072 . + 0 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 3308 3471 . + . ID=g5724.t1.exon10;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 3308 3471 . + 2 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 3697 3877 . + . ID=g5724.t1.exon11;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 3697 3877 . + 0 ID=cds.g5724.t1;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS exon 4066 4202 . + . ID=g5724.t1.exon12;Parent=g5724.t1 NODE_3033_length_4479_cov_52.9896 AUGUSTUS CDS 4066 4202 . + 2 ID=cds.g5724.t1;Parent=g5724.t1 #PROT g5724.t1 g5724 LSVSARHALCEHGEKLAAAIAVRALHNSADPAVNRVIDSAIRRCVRLRGLPGSPVDLFYRQVTGIEGLLEGITDDEREGTLGGSSDSGAGAITAADGLRAANTVFEMMLLPGLEYRTNNRDAYRLPEKASRTPWTGTAYVRSLLLYQFMETERAAEAQTNQTDHLVSQLVSLGDLILRGFEEELAAAEVAAAEGGESQRFEQLKRSFEERRTSIIAPIARLGRTELALALSERYRDFGLIAELCDALGDKARLEEYMRTFASLNFADFYFQWCITRGKRRRLFEQPAAYDGQLARFLVAHGGLKWVHDIHLNDYNTAAATLQTEADVERMSAKRKKTLVSLAKLSALAANPEDAGSGAAFGLDDTVSWCNMQLAVIAAQERLDASPQQPLNGEEVVRKYLAKADIEWNDLLLCLQIFAMTQDFRSEESNRTLLLSVWARGVKADHFDTMAGDFALRSPDDILLERTLRNSTIYKLASAAASRELAALVLAPDAIVADASLDLVKSNEGALRLLREAYAIVARDFNLS* # PASA_UPDATE: g11166.t1, single gene model update, valid-1, status:[pasa:asmbl_869,status:12],[pasa:asmbl_870,status:12],[pasa:asmbl_871,status:12], valid-1 NODE_1228_length_12889_cov_42.9483 . gene 9751 12440 . + . ID=g11166;Name=g11166.t1 NODE_1228_length_12889_cov_42.9483 . mRNA 9751 12440 . + . ID=g11166.t1;Parent=g11166;Name=g11166.t1 NODE_1228_length_12889_cov_42.9483 . five_prime_UTR 9751 9792 . + . ID=g11166.t1.utr5p1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . exon 9751 10593 . + . ID=g11166.t1.exon1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . CDS 9793 10593 . + 0 ID=cds.g11166.t1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . exon 10936 11139 . + . ID=g11166.t1.exon2;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . CDS 10936 11139 . + 0 ID=cds.g11166.t1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . exon 11512 11809 . + . ID=g11166.t1.exon3;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . CDS 11512 11809 . + 0 ID=cds.g11166.t1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . exon 12023 12440 . + . ID=g11166.t1.exon4;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . CDS 12023 12240 . + 2 ID=cds.g11166.t1;Parent=g11166.t1 NODE_1228_length_12889_cov_42.9483 . three_prime_UTR 12241 12440 . + . ID=g11166.t1.utr3p1;Parent=g11166.t1 #PROT g11166.t1 g11166 MSDEEMRHGDTQASAPSQKQHGFSSFAITSKKPANAPLIPPSSVRRKRDDEEEDEDVNGATEAIAHFDGAVERARGEPKLLVIPLQEKVHWRMGNKRARTDGDVDADAADANPFKDKDAKDAPPAKESIDQQAVREFLDAARNATHVDVDTAESLAIPLLVRNRVPGSEDLVDDKDKFKHDVNLRPDEATLDDYDAVPVEQFGEALLRGMGWAKGEAIGGTNKGLVTPIEFVPRHGRLGLGAAPKPKDEDEAKKKKPIKPGESRESKHDLVVAPGADGKVRHVKAIDEKLVARKPEGVHPGCPVRILRGPHEGLYGRAVERVRDGWQIRLGISGQVVRTYEDELREVTESEYTEKGRSAKALSERASERPSEKDSDSRQSRAPPAVTWVRPQIRVRIVSKSFKDGRYYNSKVSIVDVVSADECVCRDETGKLLEGVRQRMLETIVPRDPSSAVMILVGKSAGRIGRIMDRNTDKGVAHVQLAHDKSIAKLSFDDISEYLGSVEDDE* # PASA_UPDATE: g11162.t1, single gene model update, valid-1, status:[pasa:asmbl_872,status:12], valid-1 NODE_1228_length_12889_cov_42.9483 . gene 178 1918 . - . ID=g11162;Name=g11162.t1 NODE_1228_length_12889_cov_42.9483 . mRNA 178 1918 . - . ID=g11162.t1;Parent=g11162;Name=g11162.t1 NODE_1228_length_12889_cov_42.9483 . five_prime_UTR 1821 1918 . - . ID=g11162.t1.utr5p1;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . exon 1728 1918 . - . ID=g11162.t1.exon1;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . CDS 1728 1820 . - 0 ID=cds.g11162.t1;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . exon 1229 1564 . - . ID=g11162.t1.exon2;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . CDS 1229 1564 . - 0 ID=cds.g11162.t1;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . exon 738 989 . - . ID=g11162.t1.exon3;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . CDS 738 989 . - 0 ID=cds.g11162.t1;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . exon 178 399 . - . ID=g11162.t1.exon4;Parent=g11162.t1 NODE_1228_length_12889_cov_42.9483 . CDS 178 399 . - 0 ID=cds.g11162.t1;Parent=g11162.t1;3_prime_partial=true #PROT g11162.t1 g11162 MSAVPDIFKESANLVVHVVKNAQNHLKKLAMVISNKEDVTYEVLLTRVGAIAAMLRKEGLKTGDRVLLTVPLCIDFYAVTLAVFAVGGIVVLVDPTIGISRVNHCIRLAKPRVWLRKNGSMWFLKYALSSLKEVPLVLDVTEALFATSKAGILKESDIDMSAEQALVTFTTGSTGMPKLLLRKHSFLTHQSHAIGECHRRLHVVSGIKEIDEVSLTNLPVFALHFLKVGATCLLQPNIHKFSPDVILGVMEKYKCTTALASPAFLEKLAAHCNANKRKLPLRETVVGGAPVFHSGFDTLMR # ORIGINAL: g11164.t1 original gene structure, not modified by PASA NODE_1228_length_12889_cov_42.9483 AUGUSTUS gene 5782 6894 . - . ID=g11164;Name=g11164.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS mRNA 5782 6894 . - . ID=g11164.t1;Parent=g11164;Name=g11164.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS exon 5782 6894 . - . ID=g11164.t1.exon1;Parent=g11164.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS CDS 5782 6894 . - 0 ID=cds.g11164.t1;Parent=g11164.t1 #PROT g11164.t1 g11164 MATADGPVLFFPDDSQFSFLSQPTHRRNDVMPMQCPYMRTLGFVQEAAQRNLAVRGLDKSAFGRCSSAEYEVLDCLDPPDGNANLAGDMAPQEFATARATVSLGDSTGDMTMDSIFRFLDFNIPTFSSGTEWAALLNGTTQPNEGHSYDDTFLDACDAESAEEECPSLIDTEYNHARAASDNESDGKESGPNGIFYAALLHPSFEPQYTSTAENSDATSPPSTTLAQYTETCELWGHRYTGTNEEISKLMFDSFTTKFEVMEDGKIRCLSCEKRKRVKRKEYSPPGEQRRFPVLGQRKGVFGSMLLFRKHCKAHVYDQMGTTRKCQYCDVVVAWQAKIKQHKCKGRPTEKLYRRSGARGKGGSVEAAECT* # ORIGINAL: g11163.t1 original gene structure, not modified by PASA NODE_1228_length_12889_cov_42.9483 AUGUSTUS gene 2928 5314 . + . ID=g11163;Name=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS mRNA 2928 5314 . + . ID=g11163.t1;Parent=g11163;Name=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS exon 2928 3053 . + . ID=g11163.t1.exon1;Parent=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS CDS 2928 3053 . + 0 ID=cds.g11163.t1;Parent=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS exon 3182 3796 . + . ID=g11163.t1.exon2;Parent=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS CDS 3182 3796 . + 0 ID=cds.g11163.t1;Parent=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS exon 3950 5314 . + . ID=g11163.t1.exon3;Parent=g11163.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS CDS 3950 5314 . + 0 ID=cds.g11163.t1;Parent=g11163.t1 #PROT g11163.t1 g11163 MASEPETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSCKDLEISIIPDKENKRLIIRDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADRVKVISKHNDDEQYIWESSAGGSFTIQVDTEGPRLGRGTMLILEMKEDQLEYAEEKKIKEVVKKHSQFIGYPIKLQVVKETEKDVSDEEEDKDEKKEEGKIEEIEDDEEGKDKKTKKIKEKTTEFEELNKTKPIWTRNPDQITTEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKALLFVPKRAPFDLFEQKKKSNNIKLYVRRVFIMDNCEELIPDYLQFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCIEMFQEIAEDKENYKKFYEHFSKNLKLGIHEDSQNRTKIAELLRYASSKSGDELTSLKDYCDRMPEKQKHIYYITGESKPQVQNSPFVERVKKLGYEVLYMIDPIDEYAVQQLKEFDGKKLVSVTKEGLELEEDDEDKKKREEQKAAFESLCKVMKDILGESVEKVVISNRIVSSPCCLVTGQFGWSANMERIMKAQALRDSSMASYMASKKTMEINPDHSIIKALREKADADKNDKTVKDLVWLLFETSLLSSGFSLDDPANFSNRIHRMIKLGLSIDEEEETAGNAPEDLPPLDDADTEGSKMEEVD* # ORIGINAL: g11165.t1 original gene structure, not modified by PASA NODE_1228_length_12889_cov_42.9483 AUGUSTUS gene 7760 9196 . - . ID=g11165;Name=g11165.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS mRNA 7760 9196 . - . ID=g11165.t1;Parent=g11165;Name=g11165.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS exon 7760 9196 . - . ID=g11165.t1.exon1;Parent=g11165.t1 NODE_1228_length_12889_cov_42.9483 AUGUSTUS CDS 7760 9196 . - 0 ID=cds.g11165.t1;Parent=g11165.t1 #PROT g11165.t1 g11165 MSLSKKVAVYTKECLANGHCEGVWVDALSIASQGITLGKAFSYMGDLYATHPVWTHLRLHADGAELNSSRVRAWLQQEVLLTALTTDAEMAQIKVRCSAVKDLYHATVEDLKSFRSLARSHGKPMDEADALARHASLLSNLRAFVAAVVDPTQMWPFMVHSWRKGRTWESTETCESLGREVIKSLESVAGFTSAHPEWKHFAHCIPEDRFQLLTAYLNACRNNFARSVNLEKPTDFGEAVIGRLHAAFLECIVAVESDRPQAIYGVYNAVARTDYTYPRFDTAPPFLVIAVRARTCTAGAPEPVSLATFRFLMITWAAVIVWVGPSSERRCFVLVGNGSGVTRWIPCLYFEKSTPDRVAETLRKVLANECDRQNPPSKSDEPTRASPAWEPFVMEAAHNLVALHGDGGEYKGVVRWQQDGAWAMHDLLGSCAVAKCRSIFAPLEGEELKETKELMAELGLDDPSEETEDYAGDDEACE* # PASA_UPDATE: g14477.t1, single gene model update, valid-1, status:[pasa:asmbl_4167,status:12], valid-1 NODE_2372_length_6527_cov_40.2867 . gene 355 3365 . - . ID=g14477;Name=g14477.t1 NODE_2372_length_6527_cov_40.2867 . mRNA 355 3365 . - . ID=g14477.t1;Parent=g14477;Name=g14477.t1 NODE_2372_length_6527_cov_40.2867 . five_prime_UTR 3308 3365 . - . ID=g14477.t1.utr5p1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 3263 3365 . - . ID=g14477.t1.exon1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 3263 3307 . - 0 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 2952 2999 . - . ID=g14477.t1.exon2;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 2952 2999 . - 0 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 2567 2650 . - . ID=g14477.t1.exon3;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 2567 2650 . - 0 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 2210 2324 . - . ID=g14477.t1.exon4;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 2210 2324 . - 0 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 1992 2049 . - . ID=g14477.t1.exon5;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 1992 2049 . - 2 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 1698 1827 . - . ID=g14477.t1.exon6;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 1698 1827 . - 1 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 1190 1323 . - . ID=g14477.t1.exon7;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 1190 1323 . - 0 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 790 892 . - . ID=g14477.t1.exon8;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 790 892 . - 1 ID=cds.g14477.t1;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . exon 355 505 . - . ID=g14477.t1.exon9;Parent=g14477.t1 NODE_2372_length_6527_cov_40.2867 . CDS 355 505 . - 0 ID=cds.g14477.t1;Parent=g14477.t1;3_prime_partial=true #PROT g14477.t1 g14477 MAFVQHLRAARPLVQPRLAQTLFVRSFASEQNRTVTLIPGDGIGPEISKAVQEVFSVAKVPITWEPVDVTPVKDAEGKTAIPKAAIDSVWKNRIGLKGPLGTPIGKGHVSLNLTLRKTFNLYANVRPCRSIKGYDTAYKDVDVVIIRENTEGEYSGIEHEVVNGVVQSIKVITREASMRVAKYAFEHAKANNKSTVTAVHKANIMKLSDGLFLECCRTVAKDYPQVKYEELLLDKACLNITRDPSDFDLLVMPNLYGDILSDLCAGLIGGLGLTPSGNIGENGVAVFES # ORIGINAL: g14478.t1 original gene structure, not modified by PASA NODE_2372_length_6527_cov_40.2867 AUGUSTUS gene 4074 5309 . - . ID=g14478;Name=g14478.t1 NODE_2372_length_6527_cov_40.2867 AUGUSTUS mRNA 4074 5309 . - . ID=g14478.t1;Parent=g14478;Name=g14478.t1 NODE_2372_length_6527_cov_40.2867 AUGUSTUS exon 4074 5309 . - . ID=g14478.t1.exon1;Parent=g14478.t1 NODE_2372_length_6527_cov_40.2867 AUGUSTUS CDS 4074 5309 . - 0 ID=cds.g14478.t1;Parent=g14478.t1 #PROT g14478.t1 g14478 MYTFATTADNLTDILSGYLGSFSEKSLTTVPDIDFEDNIVDESSEIDSIASELKQETGALIFKMEYGQQRGNIASVPDMHFHNEALPVRATIVRQNQSFPELSAIDVDFALRDLNTMYRNSLEAVSRTSSGDAFVPAAIAASTKEIEELQAENERLARETDMMINIILEETRNIQKMMHDDVAAPMQQHSILFGGPVPSEAMVAQSVQTHQQQPNFQKGRPSTLAIPEPFSSKASHASDSSDCSSPVSIATSAISTPRDGCKRKRAEDDCDDHRDFRCDYPGCGKRYGKSSHLKAHKRSHTGERPYVCNWHGCGECFVRSDELSRHRRKHSGVKPFRCTVCNKSFTRSDHLTSHRKRHVVKIAEDVENQKKRRGRRSHLALIVPRNDPAALRETLAKLGQAAPESMRHLIQ* # ORIGINAL: g12414.t1 original gene structure, not modified by PASA NODE_1731_length_9486_cov_43.2715 AUGUSTUS gene 225 1500 . - . ID=g12414;Name=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS mRNA 225 1500 . - . ID=g12414.t1;Parent=g12414;Name=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS exon 1377 1500 . - . ID=g12414.t1.exon1;Parent=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS CDS 1377 1500 . - 0 ID=cds.g12414.t1;Parent=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS exon 889 1038 . - . ID=g12414.t1.exon2;Parent=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS CDS 889 1038 . - 2 ID=cds.g12414.t1;Parent=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS exon 225 379 . - . ID=g12414.t1.exon3;Parent=g12414.t1 NODE_1731_length_9486_cov_43.2715 AUGUSTUS CDS 225 379 . - 2 ID=cds.g12414.t1;Parent=g12414.t1 #PROT g12414.t1 g12414 MTKTIHLKVMSENGGDAFARETVSFDEDASPEEVHALLKSAAMCGEGAVLRLRSPVTRSLVSIKASIPDLSDSSPYELEVVQIATSPTPFATTSRSGTGATPVNASRASKGRASDRRAPSSDSDSDADLDGELATLINEFSEK # PASA_UPDATE: g12415.t1, single gene model update, valid-1, status:[pasa:asmbl_2474,status:12], valid-1 # PASA_UPDATE: g12415.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2475,status:12], valid-1 NODE_1731_length_9486_cov_43.2715 . gene 3619 9121 . - . ID=g12415;Name=g12415.t1 NODE_1731_length_9486_cov_43.2715 . mRNA 3619 9121 . - . ID=g12415.t1;Parent=g12415;Name=g12415.t1 NODE_1731_length_9486_cov_43.2715 . five_prime_UTR 9042 9121 . - . ID=g12415.t1.utr5p1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 8988 9121 . - . ID=g12415.t1.exon1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 8988 9041 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 8801 8830 . - . ID=g12415.t1.exon2;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 8801 8830 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 8548 8658 . - . ID=g12415.t1.exon3;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 8548 8658 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 8112 8331 . - . ID=g12415.t1.exon4;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 8112 8331 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 7761 7876 . - . ID=g12415.t1.exon5;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 7761 7876 . - 2 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 7342 7473 . - . ID=g12415.t1.exon6;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 7342 7473 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 7084 7125 . - . ID=g12415.t1.exon7;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 7084 7125 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 6773 6830 . - . ID=g12415.t1.exon8;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 6773 6830 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 6383 6480 . - . ID=g12415.t1.exon9;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 6383 6480 . - 2 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 5993 6068 . - . ID=g12415.t1.exon10;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 5993 6068 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 5653 5764 . - . ID=g12415.t1.exon11;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 5653 5764 . - 2 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 5389 5496 . - . ID=g12415.t1.exon12;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 5389 5496 . - 1 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 4989 5155 . - . ID=g12415.t1.exon13;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 4989 5155 . - 1 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 4569 4726 . - . ID=g12415.t1.exon14;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 4569 4726 . - 2 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 4080 4311 . - . ID=g12415.t1.exon15;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 4080 4311 . - 0 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . exon 3619 3866 . - . ID=g12415.t1.exon16;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . CDS 3619 3866 . - 2 ID=cds.g12415.t1;Parent=g12415.t1 NODE_1731_length_9486_cov_43.2715 . mRNA 3619 9121 . - . ID=g12415.t1.1.5b6be70a;Parent=g12415;Name=g12415.t1 NODE_1731_length_9486_cov_43.2715 . five_prime_UTR 8988 9121 . - . ID=g12415.t1.1.5b6be70a.utr5p1;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . five_prime_UTR 8623 8830 . - . ID=g12415.t1.1.5b6be70a.utr5p2;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 8988 9121 . - . ID=g12415.t1.1.5b6be70a.exon1;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 8548 8830 . - . ID=g12415.t1.1.5b6be70a.exon2;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 8548 8622 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 8112 8331 . - . ID=g12415.t1.1.5b6be70a.exon3;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 8112 8331 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 7761 7876 . - . ID=g12415.t1.1.5b6be70a.exon4;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 7761 7876 . - 2 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 7342 7473 . - . ID=g12415.t1.1.5b6be70a.exon5;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 7342 7473 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 7084 7125 . - . ID=g12415.t1.1.5b6be70a.exon6;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 7084 7125 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 6773 6830 . - . ID=g12415.t1.1.5b6be70a.exon7;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 6773 6830 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 6383 6480 . - . ID=g12415.t1.1.5b6be70a.exon8;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 6383 6480 . - 2 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 5993 6068 . - . ID=g12415.t1.1.5b6be70a.exon9;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 5993 6068 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 5653 5764 . - . ID=g12415.t1.1.5b6be70a.exon10;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 5653 5764 . - 2 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 5389 5496 . - . ID=g12415.t1.1.5b6be70a.exon11;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 5389 5496 . - 1 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 4989 5155 . - . ID=g12415.t1.1.5b6be70a.exon12;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 4989 5155 . - 1 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 4569 4726 . - . ID=g12415.t1.1.5b6be70a.exon13;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 4569 4726 . - 2 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 4080 4311 . - . ID=g12415.t1.1.5b6be70a.exon14;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 4080 4311 . - 0 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . exon 3619 3866 . - . ID=g12415.t1.1.5b6be70a.exon15;Parent=g12415.t1.1.5b6be70a NODE_1731_length_9486_cov_43.2715 . CDS 3619 3866 . - 2 ID=cds.g12415.t1.1.5b6be70a;Parent=g12415.t1.1.5b6be70a #PROT g12415.t1 g12415 MATELPSQVELTIISVPQDDGRRVSYDAAVHPPAATTQRTMPPKQQSVIDEKSGYKFEFSDITYQVEKKVNKESSIVTLLDGISGIVRPGEMLAIMGSSGAGKSTLLDVLAGNVVSDLLTGSILVNGAPVDKSFRRIAGYVMQDDALFPMLTVRETLMYSARLRLPSSMSRADKAQRVEELIEELKLGKCANNIIGNERVRGVSGGERRRVSIGVDMIHHPAIIFLDEPTSGLDSTNALNVVSTIKEMAVARNRCCILTIHQPSHRVQEQFDQLMILSDGETVFYGPVKNLFNHFSKYGYPVPSNVDPVEYVLDVIEEHRADGAVKKLAMFYKERLNSAVSKQIVGGASRTDLDDGPALEAHFASNVFDETRTLVSRSMKNVLRTKELFFARLGMFTMVSVCLGLLFLDVGSGYKGIGEYQSYLAFVSALLIFTSTEALPLFLIERNIFVRENSRGAYRVLSYVFANIITYMPFFVILAFAFTIPSYWMVGLQADAGRFFFFVFAVWAILFVANAFVMTISTVVPDFITGNSISTALFAFMFLMSGFFIAKNSIPNYWIWFHYISIFKYAFEALMVNTFGDGATLEFYCDPVSISGSLPSNGTCTITGQQVLSDMGLSDVNKWGDVGAMVAFATLYRILFYLALKYLHKGQRK* #PROT g12415.t1.1.5b6be70a g12415 MPPKQQSVIDEKSGYKFEFSDITYQVEKKVNKESSIVTLLDGISGIVRPGEMLAIMGSSGAGKSTLLDVLAGNVVSDLLTGSILVNGAPVDKSFRRIAGYVMQDDALFPMLTVRETLMYSARLRLPSSMSRADKAQRVEELIEELKLGKCANNIIGNERVRGVSGGERRRVSIGVDMIHHPAIIFLDEPTSGLDSTNALNVVSTIKEMAVARNRCCILTIHQPSHRVQEQFDQLMILSDGETVFYGPVKNLFNHFSKYGYPVPSNVDPVEYVLDVIEEHRADGAVKKLAMFYKERLNSAVSKQIVGGASRTDLDDGPALEAHFASNVFDETRTLVSRSMKNVLRTKELFFARLGMFTMVSVCLGLLFLDVGSGYKGIGEYQSYLAFVSALLIFTSTEALPLFLIERNIFVRENSRGAYRVLSYVFANIITYMPFFVILAFAFTIPSYWMVGLQADAGRFFFFVFAVWAILFVANAFVMTISTVVPDFITGNSISTALFAFMFLMSGFFIAKNSIPNYWIWFHYISIFKYAFEALMVNTFGDGATLEFYCDPVSISGSLPSNGTCTITGQQVLSDMGLSDVNKWGDVGAMVAFATLYRILFYLALKYLHKGQRK* # ORIGINAL: g2762.t1 original gene structure, not modified by PASA NODE_4325_length_1818_cov_41.8428_potentialcontaminant AUGUSTUS gene 2 1818 . + . ID=g2762;Name=g2762.t1 NODE_4325_length_1818_cov_41.8428_potentialcontaminant AUGUSTUS mRNA 2 1818 . + . ID=g2762.t1;Parent=g2762;Name=g2762.t1 NODE_4325_length_1818_cov_41.8428_potentialcontaminant AUGUSTUS exon 2 1818 . + . ID=g2762.t1.exon1;Parent=g2762.t1 NODE_4325_length_1818_cov_41.8428_potentialcontaminant AUGUSTUS CDS 2 1818 . + 2 ID=cds.g2762.t1;Parent=g2762.t1 #PROT g2762.t1 g2762 RVDNKQTEQRIERCVEILQETVRRDGNHVANIEKRLADSKRHIDWLYDAIRWPTTTTTNPYTYGTPPDSQRDAEPTRNVTYADSAQQTDSELTRGNNPVQASTWGKTLQTRGNEMQIQTEETQRRNSTGSNSLDRAREDNPLQRNSTGSATLQTTRGDNTVQHDSSGTELHSTLGDNTVQHDSTGTATLNATPADNPMRRDSTGTAPNTTPANNPLRRDSTGTATLNTTPADNPLPTGTAPNSSGDEPLRDSTGTAPNSTCGDETLRDSTGTNALNTPSTLNTLNTLNTPDADDLMQVTDGGNPASPTGSTNNIPPKKRLMTEVTNDVSNFNLPKRARFSDPVLVDYNEASDESLPTPRGPGRPRGSPSAQPRGRLPGSGRGRGRGRGSGRGRGRGRPPVIDSPSEPVDMSLIKLNPPGVAGLRQLIDNASLSRLYGIWTALRTLPLIHGEGTIVAIGDDYVEPTTLLHLNHLSRRVAKLEHMKKHGLTDGVSVDNQTWSFRYFETCIEFEHALRLAVSLYKQLPAMCKKLGLPESFRDDLIHQERDVLLTATLRVRDFLSAIDGTNLTDAFVNEVVAFFKERGSVVSDEACYLVVAPVHQELSQ # ORIGINAL: g11047.t1 original gene structure, not modified by PASA # ORIGINAL: g11047.t2 original gene structure, not modified by PASA NODE_486_length_22717_cov_49.1452 AUGUSTUS gene 2407 4740 . - . ID=g11047;Name=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 2407 3809 . - . ID=g11047.t1;Parent=g11047;Name=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 3751 3809 . - . ID=g11047.t1.exon1;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 3751 3809 . - 0 ID=cds.g11047.t1;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 3253 3438 . - . ID=g11047.t1.exon2;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 3253 3438 . - 1 ID=cds.g11047.t1;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 2407 2932 . - . ID=g11047.t1.exon3;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 2407 2932 . - 1 ID=cds.g11047.t1;Parent=g11047.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 2407 4740 . - . ID=g11047.t2;Parent=g11047;Name=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 4285 4740 . - . ID=g11047.t2.exon1;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 4285 4740 . - 0 ID=cds.g11047.t2;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 4017 4074 . - . ID=g11047.t2.exon2;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 4017 4074 . - 0 ID=cds.g11047.t2;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 3751 3778 . - . ID=g11047.t2.exon3;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 3751 3778 . - 2 ID=cds.g11047.t2;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 3253 3438 . - . ID=g11047.t2.exon4;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 3253 3438 . - 1 ID=cds.g11047.t2;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 2407 2932 . - . ID=g11047.t2.exon5;Parent=g11047.t2 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 2407 2932 . - 1 ID=cds.g11047.t2;Parent=g11047.t2 #PROT g11047.t1 g11047 MTCLHAGISPVRGLIVEFFRRYATPEATIAADTDALIDLLRPLGLYRRRAHSIRRMSEDFIASNWTLPSQLYGIGKYAEDAYRIFCLGEWAQVEPNDHALNYFHEWLVATEGGTLPTCPLTSNAVESHDHDLDNNSNENRTAPVNKRMSTTASKTPKMRAVSLVEDGKRESSEDREDNAGVKVTPKAEKTGHSVPRTHTSATKRKRTRALIGTDTEVHCPDRTGDRSDEEMNALDGDGHVPHARHRRVRRVLCAAP* #PROT g11047.t2 g11047 MRALQTVPSSLEGGILTALNSDDTLDASLTTNGLSVGAVSNCTSTQSALQRIRKKKIKTALMHSASQTRTASSDNGALTAPHFYGLGLRRSANASKRKEGDGKVGVLDVAPAVDIAYLEGISATERSRRPIGEVRWVPPRPPRPLLQHYLWKSPWHLLIACMFLNRTTGHQVRGLIVEFFRRYATPEATIAADTDALIDLLRPLGLYRRRAHSIRRMSEDFIASNWTLPSQLYGIGKYAEDAYRIFCLGEWAQVEPNDHALNYFHEWLVATEGGTLPTCPLTSNAVESHDHDLDNNSNENRTAPVNKRMSTTASKTPKMRAVSLVEDGKRESSEDREDNAGVKVTPKAEKTGHSVPRTHTSATKRKRTRALIGTDTEVHCPDRTGDRSDEEMNALDGDGHVPHARHRRVRRVLCAAP* # PASA_UPDATE: g11052.t1, single gene model update, valid-1, status:[pasa:asmbl_7682,status:3], valid-1 NODE_486_length_22717_cov_49.1452 . gene 18477 20737 . + . ID=g11052;Name=g11052.t1 NODE_486_length_22717_cov_49.1452 . mRNA 18477 20737 . + . ID=g11052.t1;Parent=g11052;Name=g11052.t1 NODE_486_length_22717_cov_49.1452 . five_prime_UTR 18477 18539 . + . ID=g11052.t1.utr5p1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . exon 18477 18654 . + . ID=g11052.t1.exon1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . CDS 18540 18654 . + 0 ID=cds.g11052.t1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . exon 19082 19196 . + . ID=g11052.t1.exon2;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . CDS 19082 19196 . + 2 ID=cds.g11052.t1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . exon 19430 19577 . + . ID=g11052.t1.exon3;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . CDS 19430 19577 . + 1 ID=cds.g11052.t1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . exon 19963 20047 . + . ID=g11052.t1.exon4;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . CDS 19963 20047 . + 0 ID=cds.g11052.t1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . exon 20283 20737 . + . ID=g11052.t1.exon5;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . CDS 20283 20464 . + 2 ID=cds.g11052.t1;Parent=g11052.t1 NODE_486_length_22717_cov_49.1452 . three_prime_UTR 20465 20737 . + . ID=g11052.t1.utr3p1;Parent=g11052.t1 #PROT g11052.t1 g11052 MPKVISKSVVVTDRQNENENEKQVTPYYCLCGQLSLIMGDVMAALPRRQTDSSRVLDTTAILAKLTTKKGDTVFLKRPNGLERQIRENCKKCGLRVCYRSEEGSSTVYLVDGALYNQAGQQRAASQVAANAQSRTFNKFIRGDVQARAAVLGVKASSAEMTFEDEEREAAQQNIDSSYAANARIVAAKTGATKRKEDFESQQSTKRHRGTLLGE* # ORIGINAL: g11050.t1 original gene structure, not modified by PASA NODE_486_length_22717_cov_49.1452 AUGUSTUS gene 14097 15364 . + . ID=g11050;Name=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 14097 15364 . + . ID=g11050.t1;Parent=g11050;Name=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 14097 14258 . + . ID=g11050.t1.exon1;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 14097 14258 . + 0 ID=cds.g11050.t1;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 14462 14782 . + . ID=g11050.t1.exon2;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 14462 14782 . + 0 ID=cds.g11050.t1;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 14864 14948 . + . ID=g11050.t1.exon3;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 14864 14948 . + 0 ID=cds.g11050.t1;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 15228 15364 . + . ID=g11050.t1.exon4;Parent=g11050.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 15228 15364 . + 2 ID=cds.g11050.t1;Parent=g11050.t1 #PROT g11050.t1 g11050 MDPLGLIYEPQGATLTFGNTRPGSEDGRFEPFANFGLVNEYFFLFSLKKSGVSKSPAKNAPCQLSQPSPRESLGKGVAGQAMPFAPPPSPSRGPPKLWFGRNETDGPIDGNTAPRISLPGNTPAINTESQPAASTMEATNMAVDEPALPTEDRHLALDVSPVDDSPQSDVFAVPEIPQREALLKVPIGKLDAAMLLIEQLTMFNPSETVKFDQDVAECNAIYEAIMNMGAEFVQ* # ORIGINAL: g11053.t1 original gene structure, not modified by PASA NODE_486_length_22717_cov_49.1452 AUGUSTUS gene 20923 22341 . - . ID=g11053;Name=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 20923 22341 . - . ID=g11053.t1;Parent=g11053;Name=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 22306 22341 . - . ID=g11053.t1.exon1;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 22306 22341 . - 0 ID=cds.g11053.t1;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 21933 21979 . - . ID=g11053.t1.exon2;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 21933 21979 . - 0 ID=cds.g11053.t1;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 21574 21652 . - . ID=g11053.t1.exon3;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 21574 21652 . - 1 ID=cds.g11053.t1;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 20923 21084 . - . ID=g11053.t1.exon4;Parent=g11053.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 20923 21084 . - 0 ID=cds.g11053.t1;Parent=g11053.t1 #PROT g11053.t1 g11053 MLDGAHTPESLQVCAAWFKSASVDAASGLPIRRILLFNCSSDRDAQRLMQPLYETHVFGSISDAAAWITNDHRRAVADSAGARSDVLVTGSLHLVGGVIRVMGIPTS* # ORIGINAL: g11049.t1 original gene structure, not modified by PASA NODE_486_length_22717_cov_49.1452 AUGUSTUS gene 8491 13193 . - . ID=g11049;Name=g11049.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 8491 13193 . - . ID=g11049.t1;Parent=g11049;Name=g11049.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 9931 13193 . - . ID=g11049.t1.exon1;Parent=g11049.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 9931 13193 . - 0 ID=cds.g11049.t1;Parent=g11049.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 8491 9718 . - . ID=g11049.t1.exon2;Parent=g11049.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 8491 9718 . - 1 ID=cds.g11049.t1;Parent=g11049.t1 #PROT g11049.t1 g11049 MAQTEKMTTMFPTTIPSLFPTAPHPVKKHEKRIKSLKKTTTVEVNRAFFVTPDDALVLKHASDRPRKMDSVRYINLSSQHLRLLGSVLRCSQLRMLYLHSNYVESLEGLDACPNLALLDLHNNHVEKLPGPEFWSKLVSLRALYLHGNAMGNLKNVQGLAFAPRLTIVTLYDTPVALHPNYRHFLINTLLGLKALDFYAVSDEEIIEDAAFGGRFSAMSPTFRLDTYLVPSGRTSMDSLAGLHRLLWRISYMCGHNSPIVCLQASMRGWLVRRDYRLYIRVMTWVALTIQRTYRKHAFRRRCEARRLRNLSEAAPSSSHGPARPSRATVKAVRALPRVRVTRDYLTQMALRIQQWWRTRPDWAVKEQAELEGQSAHIVELQPMSEAASEAGVAIEGEQQQQQQQQQQTQSHPLQQFESNVVQPSPFSVDQVAYASVVSTPRTQHHQLIGSSTTGLAEGSPKAAPVEYHGMPIDMEHELHGKRLQYFQNIIERPRNQQRNNTTDAYVPAHVHADAHGQVPHGATQQAQGATVMRQFGAPSKEPLTLGLQAALQGGVSAHDDGPWNANGYPSADAQQWEHMQYQQLQQQSLPYQYQLDANIPYAGQQAVDSYLASLNAPSAAYPPDGPPPASFGAVDGSPGVADGGVHVRQERPDALPNVNPVMIFACLEEPTFLAEIKSEREKYAGIVQRPPLFYSTTGRGGANRSSGAPGVGGMSSSQVQYGANDSTTMPHYANASAQMQETMSPQQHPQQEEHQQHQHRVTFAEPEYNRQHGGGVADASFTSGFQQYQYYPPPANQFYDAATGAPQYYDAYPPAPYGVMYDIHGGQQHYDQQQVYLQQQEELDQEIGVLGATRPLEWNHPLRSYVRSQRASGDVTRTERELHKLKLARQEDEYSARAPEIRKAVSGSPSPWNEVSTTRRHLFERVQATMDFELLKKAQRIRAERRVRDDLDATADKVSDLKDTTREGRDKAALQIQMRQRAARAQAVATRESLDRRLRDKKVEEERRIAENRERIASIKAQAELASAERRFANEFVRHHNSISKVVTQHELSLLKDGRMIEQKTTVDALRAKEAEAKAKVEKHLEQRYLRTRMEIEEERCFVDAEVGRRVEESKRSLDPVRTLISHRRRKQKELDAQRALDLEALGESGYIMEEYLRQQEQFANAHQPPPRAPLHLPAVAPDENAVQMMRVADDTPLDPDEAFESAIKKNTMPSNFRAAFRHKLQQSFSIFGPNKRARTPPPVHHSKPALLRVRLVRPALEDGTPAEARVINVATGQPVYSRPPPVEVGESAEADNDAVAPASEWRDPGPPKRMSPLREAVKSASNYGADELLKMLFEGDDVDDGFVARLEREAERENLEMDLTNMLADFALKARDADTREEAIGALLQTAAVNTTLAGLIRAAGGPVSDQLELTLDLGGPPPALYGGGGRNGGGYRGDNDEEDLASTGVGMGMYGDAGEDGGTGGADVESVRSSATDLSVVGVKANAVPKKQRE* # PASA_UPDATE: g11046.t1, single gene model update, valid-1, status:[pasa:asmbl_7680,status:3], valid-1 # PASA_UPDATE: g11046.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7679,status:3], valid-1 NODE_486_length_22717_cov_49.1452 . gene 104 2327 . + . ID=g11046;Name=g11046.t1 NODE_486_length_22717_cov_49.1452 . mRNA 104 2327 . + . ID=g11046.t1;Parent=g11046;Name=g11046.t1 NODE_486_length_22717_cov_49.1452 . five_prime_UTR 104 262 . + . ID=g11046.t1.utr5p1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . exon 104 417 . + . ID=g11046.t1.exon1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . CDS 263 417 . + 0 ID=cds.g11046.t1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . exon 523 697 . + . ID=g11046.t1.exon2;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . CDS 523 697 . + 1 ID=cds.g11046.t1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . exon 873 1216 . + . ID=g11046.t1.exon3;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . CDS 873 1216 . + 0 ID=cds.g11046.t1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . exon 1465 2327 . + . ID=g11046.t1.exon4;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . CDS 1465 2005 . + 1 ID=cds.g11046.t1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . three_prime_UTR 2006 2327 . + . ID=g11046.t1.utr3p1;Parent=g11046.t1 NODE_486_length_22717_cov_49.1452 . mRNA 104 2327 . + . ID=g11046.t1.1.5b6be70c;Parent=g11046;Name=g11046.t1 NODE_486_length_22717_cov_49.1452 . five_prime_UTR 104 272 . + . ID=g11046.t1.1.5b6be70c.utr5p1;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . exon 104 417 . + . ID=g11046.t1.1.5b6be70c.exon1;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . CDS 273 417 . + 0 ID=cds.g11046.t1.1.5b6be70c;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . exon 576 697 . + . ID=g11046.t1.1.5b6be70c.exon2;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . CDS 576 697 . + 2 ID=cds.g11046.t1.1.5b6be70c;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . exon 873 1216 . + . ID=g11046.t1.1.5b6be70c.exon3;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . CDS 873 1216 . + 0 ID=cds.g11046.t1.1.5b6be70c;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . exon 1465 2327 . + . ID=g11046.t1.1.5b6be70c.exon4;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . CDS 1465 2005 . + 1 ID=cds.g11046.t1.1.5b6be70c;Parent=g11046.t1.1.5b6be70c NODE_486_length_22717_cov_49.1452 . three_prime_UTR 2006 2327 . + . ID=g11046.t1.1.5b6be70c.utr3p1;Parent=g11046.t1.1.5b6be70c #PROT g11046.t1 g11046 MGGDGRRRHLRGCCVGPQCVPTCAVHRLDSSLCVFKVAYARNMSWPPHNQQEKNKLYISTDALMLPTITEFSRSLCRVTCAHDLRPEGEFALLSQGRIHYVLRGNPKAELLVLLPGFTLFSWSWKAIADLLVASGYRVLCFDYYGSGFSSSPAGVTHDVDFYVHQTMELLSTIGMEQAPFTLVGFSLGGLVACSIAAQYPHEVQRLVLVSPGGFPVTESDQSKSAIRFVSQLAYRGTKTIVGESIIDAACALTVATLGCLPLLRRLAGPPFNLTFFRDRKGRPLSRQETERHLGIVGEICNHLAFQVKETPDFFRNLLLVLRRYPLFSNEGVVTQMRAIHARCLSCGDVRTASCRTSTASSTCDACRPPNCTLSRARRMPSYWKLRMSVLSQYSTLCAPIVSPC* #PROT g11046.t1.1.5b6be70c g11046 MGVAAICGAAAWVRNAFLLALFIAWIPVYVYLKSLTRAICHGLHTINKKFSRSLCRVTCAHDLRPEGEFALLSQGRIHYVLRGNPKAELLVLLPGFTLFSWSWKAIADLLVASGYRVLCFDYYGSGFSSSPAGVTHDVDFYVHQTMELLSTIGMEQAPFTLVGFSLGGLVACSIAAQYPHEVQRLVLVSPGGFPVTESDQSKSAIRFVSQLAYRGTKTIVGESIIDAACALTVATLGCLPLLRRLAGPPFNLTFFRDRKGRPLSRQETERHLGIVGEICNHLAFQVKETPDFFRNLLLVLRRYPLFSNEGVVTQMRAIHARCLSCGDVRTASCRTSTASSTCDACRPPNCTLSRARRMPSYWKLRMSVLSQYSTLCAPIVSPC* # PASA_UPDATE: g11051.t1, single gene model update, valid-1, status:[pasa:asmbl_7681,status:3], valid-1 NODE_486_length_22717_cov_49.1452 . gene 16523 18153 . + . ID=g11051;Name=g11051.t1 NODE_486_length_22717_cov_49.1452 . mRNA 16523 18153 . + . ID=g11051.t1;Parent=g11051;Name=g11051.t1 NODE_486_length_22717_cov_49.1452 . five_prime_UTR 16523 16849 . + . ID=g11051.t1.utr5p1;Parent=g11051.t1 NODE_486_length_22717_cov_49.1452 . exon 16523 16940 . + . ID=g11051.t1.exon1;Parent=g11051.t1 NODE_486_length_22717_cov_49.1452 . CDS 16850 16940 . + 0 ID=cds.g11051.t1;Parent=g11051.t1 NODE_486_length_22717_cov_49.1452 . exon 17043 18153 . + . ID=g11051.t1.exon2;Parent=g11051.t1 NODE_486_length_22717_cov_49.1452 . CDS 17043 17734 . + 2 ID=cds.g11051.t1;Parent=g11051.t1 NODE_486_length_22717_cov_49.1452 . three_prime_UTR 17735 18153 . + . ID=g11051.t1.utr3p1;Parent=g11051.t1 #PROT g11051.t1 g11051 MTSHATQQKSGKSLHIPSELAHYRNPYSLIDFAADVIETTWEARALARAPQEERHRRRTQLRRFITCIVKRASVTSVSILAGIMWIERLKTRYPRAEGGEKCGHRLFLVALIVASKMFADGPKTSRDWSTVSGVFDSAELDRMEDEFLTFLQDDIRISPSAFDEFVSKRLGTDQVVPMEKPVAENKNVSDEQDMRAPSLASSASAPALRTALQRRDGVPVASGTASRVVAPQVMRVKVARKLEELDDVGVVPECKRQCAA* # ORIGINAL: g11048.t1 original gene structure, not modified by PASA NODE_486_length_22717_cov_49.1452 AUGUSTUS gene 5374 7959 . - . ID=g11048;Name=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS mRNA 5374 7959 . - . ID=g11048.t1;Parent=g11048;Name=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 7680 7959 . - . ID=g11048.t1.exon1;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 7680 7959 . - 0 ID=cds.g11048.t1;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 7286 7468 . - . ID=g11048.t1.exon2;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 7286 7468 . - 2 ID=cds.g11048.t1;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 6088 6808 . - . ID=g11048.t1.exon3;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 6088 6808 . - 2 ID=cds.g11048.t1;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS exon 5374 5662 . - . ID=g11048.t1.exon4;Parent=g11048.t1 NODE_486_length_22717_cov_49.1452 AUGUSTUS CDS 5374 5662 . - 1 ID=cds.g11048.t1;Parent=g11048.t1 #PROT g11048.t1 g11048 MDAAIKAVVGPLRGSNRELIAAGVTGASVAIIVIRYILRALAGRSVSADRSGNGPKSGVFGEKELRGLFWETVSEPTTQDALKSQAVAAMCDSAFDGLTQSCEKWESALQQATVAGDLAVRTRIRKVLRRLYATLDVCEERSDGDNDSFVSAHSDMYDVEEIDGLRSYESAEVITDSGPLSPRRSSMKPNGTVITNGERTRDVDVKTSFYAEAMKLATQGEIKCRRVRAKMVGCASDTEFLAKVHCLRQALNIALEDVAARNWFVQSTRDLIAAVFRRAHKDAAAFLASYDNMMAFVLEAAEDSAHAADGHHGRHHGRHHNQSHGTTAAGSASNRMRVELLDKGVVCVSLYDVAFDFLILDAFEDLESPPAALISVMQNTWIPQSMKEKALSTAVWSIVAAKSQSLTDRDGFLSRFYNLSTHTSPVFAYGFLGPAGELKETCEFFKDQMVGFVRDMFSSENGRYDSVERLASDIMAIAKRRVVEAQQRLR* # PASA_UPDATE: g2362.t1, single gene model update, valid-1, status:[pasa:asmbl_905,status:12], valid-1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . gene 2 737 . + . ID=g2362;Name=g2362.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 2 737 . + . ID=g2362.t1;Parent=g2362;Name=g2362.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 2 3 . + . ID=g2362.t1.utr5p1;Parent=g2362.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 2 737 . + . ID=g2362.t1.exon1;Parent=g2362.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 4 558 . + 0 ID=cds.g2362.t1;Parent=g2362.t1;5_prime_partial=true NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 559 737 . + . ID=g2362.t1.utr3p1;Parent=g2362.t1 #PROT g2362.t1 g2362 VRRATLLLASQLNSAKIPYVIAGAIACNFHGHHRATQDVDIIVNREDLWKVGKTLDGRGWRPRFSGAMKSFQDVDNRVDVDVITSGEFPGDGKPKAVAFPHIDETTAVARDENGVTYLPLVKLIELKLASATAEHRKKDEGDVLALIKANNLPRAFVRELDVSVRELFVKLWESHHEAERRGLE* # PASA_UPDATE: g2363.t1, single gene model update, valid-1, status:[pasa:asmbl_899,status:3], valid-1 # PASA_UPDATE: g2363.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_898,status:12],[pasa:asmbl_906,status:12], valid-1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . gene 965 5668 . - . ID=g2363;Name=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 965 5668 . - . ID=g2363.t1;Parent=g2363;Name=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 5572 5668 . - . ID=g2363.t1.utr5p1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 5499 5668 . - . ID=g2363.t1.exon1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 5499 5571 . - 0 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 4602 4888 . - . ID=g2363.t1.exon2;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 4602 4888 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3911 4079 . - . ID=g2363.t1.exon3;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3911 4079 . - 0 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3493 3663 . - . ID=g2363.t1.exon4;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3493 3663 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3165 3332 . - . ID=g2363.t1.exon5;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3165 3332 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 2771 2938 . - . ID=g2363.t1.exon6;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 2771 2938 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 2260 2430 . - . ID=g2363.t1.exon7;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 2260 2430 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 965 1929 . - . ID=g2363.t1.exon8;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 1598 1929 . - 2 ID=cds.g2363.t1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 965 1597 . - . ID=g2363.t1.utr3p1;Parent=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 965 5657 . - . ID=g2363.t1.1.5b6be70a;Parent=g2363;Name=g2363.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 5572 5657 . - . ID=g2363.t1.1.5b6be70a.utr5p1;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 5499 5657 . - . ID=g2363.t1.1.5b6be70a.exon1;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 5499 5571 . - 0 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 4602 4888 . - . ID=g2363.t1.1.5b6be70a.exon2;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 4602 4888 . - 2 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3911 4079 . - . ID=g2363.t1.1.5b6be70a.exon3;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3911 4079 . - 0 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3493 3663 . - . ID=g2363.t1.1.5b6be70a.exon4;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3493 3663 . - 2 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 3165 3332 . - . ID=g2363.t1.1.5b6be70a.exon5;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 3165 3332 . - 2 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 2771 2938 . - . ID=g2363.t1.1.5b6be70a.exon6;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 2771 2938 . - 2 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 965 2430 . - . ID=g2363.t1.1.5b6be70a.exon7;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 2099 2430 . - 2 ID=cds.g2363.t1.1.5b6be70a;Parent=g2363.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 965 2098 . - . ID=g2363.t1.1.5b6be70a.utr3p1;Parent=g2363.t1.1.5b6be70a #PROT g2363.t1 g2363 MAAQMGMKSLLAATVILSVVSFSAGGKIFGGFFNFACSSASEIGTNGYVSSAVDNFDVACRTLNPGAGSGNFLSCAGKYVLNPSVHSAGDKQLQFGYALTNGVNGVNNILVKLNEDGDLQFVMSSSNNVADAVATILWIGGPDNATFTPGQSNKGTVALSEIACSANAQPYYLGADPVDCAYSNYTEYSDCTLTCGSGTKYRTRTITTQAKYGGVACDAATLNVSTSCNTDPCPVDCQWGPYSNFSSCSSACGAGTQTRTRQILVQAEHNGALCTGSASDSQACTGVTCPVDCAWGNYTAFGACSNTCGAGKKTRTRSILTQAENGGALCSGSASEEADCTGVTCPVNCEYNSFGDYSTCTKTCGTGTQTRVRTVKVQAENGGTLCTDPASETINCNTDACLVNCTNAVLQNSVSLSGYTPGFCIITGAPLKLSILSLDDFSLLVRFTTNTGQCNVGSIYQIAASTTTCTKCKDATITTPLTFDGENSLSNPVTLKGCPVVSSGITDIAFAN* #PROT g2363.t1.1.5b6be70a g2363 MAAQMGMKSLLAATVILSVVSFSAGGKIFGGFFNFACSSASEIGTNGYVSSAVDNFDVACRTLNPGAGSGNFLSCAGKYVLNPSVHSAGDKQLQFGYALTNGVNGVNNILVKLNEDGDLQFVMSSSNNVADAVATILWIGGPDNATFTPGQSNKGTVALSEIACSANAQPYYLGADPVDCAYSNYTEYSDCTLTCGSGTKYRTRTITTQAKYGGVACDAATLNVSTSCNTDPCPVDCQWGPYSNFSSCSSACGAGTQTRTRQILVQAEHNGALCTGSASDSQACTGVTCPVDCAWGNYTAFGACSNTCGAGKKTRTRSILTQAENGGALCSGSASEEADCTGVTCPVNCEYNSFGDYSTCTKTCGTGTQTRVRTVKVQAENGGTLCTDPASETINCNTDACLGEVLFIGTWGYLCSSPLAVCQSCQPGSVSPVYHRSFSLSLCRVCLVLSCLDIF* # PASA_UPDATE: g2364.t1, single gene model update, valid-1, status:[pasa:asmbl_902,status:3], valid-1 # PASA_UPDATE: g2364.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_903,status:12],[pasa:asmbl_907,status:12],[pasa:asmbl_908,status:12], valid-1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . gene 6601 8879 . + . ID=g2364;Name=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 6601 8879 . + . ID=g2364.t1;Parent=g2364;Name=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 6601 6651 . + . ID=g2364.t1.utr5p1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 6601 6727 . + . ID=g2364.t1.exon1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 6652 6727 . + 0 ID=cds.g2364.t1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 7293 7460 . + . ID=g2364.t1.exon2;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 7293 7460 . + 2 ID=cds.g2364.t1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 7852 8019 . + . ID=g2364.t1.exon3;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 7852 8019 . + 2 ID=cds.g2364.t1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 8202 8372 . + . ID=g2364.t1.exon4;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 8202 8372 . + 2 ID=cds.g2364.t1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 8553 8879 . + . ID=g2364.t1.exon5;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 8553 8845 . + 2 ID=cds.g2364.t1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 8846 8879 . + . ID=g2364.t1.utr3p1;Parent=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 6605 8879 . + . ID=g2364.t1.1.5b6be70a;Parent=g2364;Name=g2364.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 6605 7117 . + . ID=g2364.t1.1.5b6be70a.utr5p1;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 6605 7460 . + . ID=g2364.t1.1.5b6be70a.exon1;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 7118 7460 . + 0 ID=cds.g2364.t1.1.5b6be70a;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 7852 8019 . + . ID=g2364.t1.1.5b6be70a.exon2;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 7852 8019 . + 2 ID=cds.g2364.t1.1.5b6be70a;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 8202 8372 . + . ID=g2364.t1.1.5b6be70a.exon3;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 8202 8372 . + 2 ID=cds.g2364.t1.1.5b6be70a;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 8553 8879 . + . ID=g2364.t1.1.5b6be70a.exon4;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 8553 8845 . + 2 ID=cds.g2364.t1.1.5b6be70a;Parent=g2364.t1.1.5b6be70a NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 8846 8879 . + . ID=g2364.t1.1.5b6be70a.utr3p1;Parent=g2364.t1.1.5b6be70a #PROT g2364.t1 g2364 MASFSATLLFAVVALLAVAAVRSDEAVDCQYSAWSDWSSCSTACGFGVSTRVRVIAIQAANGGALCTGPSVEEKECVGSTCAIDCEFSAWSEWSACSAACGQGVKIRTRHITVQAQFGGALCSGSSFDSALCNVADCPIDCELDEFTEWSSCSLPCGGGTQSRARTLKVQAQNGGKLCTGASKEERACNEQACAVTCNDGVVLASSDIDVFVCTYTGAFKSLYSHNNFISGFNAGGCSVGKLYHAAATTSTCGKCTDGSTPQVFEGTGVTGTESYVFCPISTDIKTSAFAN* #PROT g2364.t1.1.5b6be70a g2364 MQFINCSKKNMRILSGILLAIEATYPAPRSFIHCISSISLHLLVACHCVQHCAGLVFAAVDCQYSAWSDWSSCSTACGFGVSTRVRVIAIQAANGGALCTGPSVEEKECVGSTCAIDCEFSAWSEWSACSAACGQGVKIRTRHITVQAQFGGALCSGSSFDSALCNVADCPIDCELDEFTEWSSCSLPCGGGTQSRARTLKVQAQNGGKLCTGASKEERACNEQACAVTCNDGVVLASSDIDVFVCTYTGAFKSLYSHNNFISGFNAGGCSVGKLYHAAATTSTCGKCTDGSTPQVFEGTGVTGTESYVFCPISTDIKTSAFAN* # PASA_UPDATE: g2365.t1, single gene model update, valid-1, status:[pasa:asmbl_904,status:3], valid-1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . gene 9809 11878 . + . ID=g2365;Name=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . mRNA 9809 11878 . + . ID=g2365.t1;Parent=g2365;Name=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . five_prime_UTR 9809 9868 . + . ID=g2365.t1.utr5p1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 9809 9980 . + . ID=g2365.t1.exon1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 9869 9980 . + 0 ID=cds.g2365.t1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 10385 10674 . + . ID=g2365.t1.exon2;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 10385 10674 . + 2 ID=cds.g2365.t1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 11061 11232 . + . ID=g2365.t1.exon3;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 11061 11232 . + 0 ID=cds.g2365.t1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . exon 11553 11878 . + . ID=g2365.t1.exon4;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . CDS 11553 11563 . + 2 ID=cds.g2365.t1;Parent=g2365.t1 NODE_1236_length_12831_cov_41.6595_potentialcontaminant . three_prime_UTR 11564 11878 . + . ID=g2365.t1.utr3p1;Parent=g2365.t1 #PROT g2365.t1 g2365 MAAQNIFLLSMAVLLAVASVSTASPSMEDWAAYEPHEVAARTTTQFSFGGKFSFHCLIAADVSSGVATTINTATQQFACKVFFDGTGASFLLCDGRYALSPSASYPVVFNFDMVTPVNGARYVVVRINSAGDVKVVLASDADGTTVISSPLVSKTGPLPAGPDSSPGFQSVGTVSASSIACKSSVEPFFVKVPV* # PASA_UPDATE: g4381.t1, single gene model update, valid-1, status:[pasa:asmbl_4793,status:12],[pasa:asmbl_4794,status:12], valid-1 NODE_2683_length_5459_cov_39.8302 . gene 255 4925 . - . ID=g4381;Name=g4381.t1 NODE_2683_length_5459_cov_39.8302 . mRNA 255 4925 . - . ID=g4381.t1;Parent=g4381;Name=g4381.t1 NODE_2683_length_5459_cov_39.8302 . five_prime_UTR 4807 4925 . - . ID=g4381.t1.utr5p1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 3745 4925 . - . ID=g4381.t1.exon1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 3745 4806 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 3356 3535 . - . ID=g4381.t1.exon2;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 3356 3535 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 2991 3068 . - . ID=g4381.t1.exon3;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 2991 3068 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 2648 2719 . - . ID=g4381.t1.exon4;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 2648 2719 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 2265 2342 . - . ID=g4381.t1.exon5;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 2265 2342 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 1833 1907 . - . ID=g4381.t1.exon6;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 1833 1907 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 921 1490 . - . ID=g4381.t1.exon7;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 921 1490 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 567 728 . - . ID=g4381.t1.exon8;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 567 728 . - 0 ID=cds.g4381.t1;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . exon 255 347 . - . ID=g4381.t1.exon9;Parent=g4381.t1 NODE_2683_length_5459_cov_39.8302 . CDS 255 347 . - 0 ID=cds.g4381.t1;Parent=g4381.t1;3_prime_partial=true #PROT g4381.t1 g4381 MPRQAAVAARAGIAETTTPRRSARLATPSRDSVVYTAASHVKSASRGIASDSYPSAPHYETRSRGSSYEAPSLATTAATETTAARSRVTRSHDSPHNDDPKESFNVRRLRQWINSSFTAATGGDSVSEAGESALYGLDSGDEGDAHSHRSHTSPLHGRQVQPRQSPLVAFRLFFAAIFSVFRRATHAAVGGLSGGFTNVNSRVGASARSSFSRVRNSVDSAAAFASQRFLSGARAASGWKHFRLLVGVGAIAVVIALAVPQLPHLLPERAAVVDSDATVSVPAHSEPATPQSTTGSASVPSSFDTAVARDLNERIARLESTILALRHDSKTTVTLRQDVDDLIKATEAKSVAIESVRDAVDAESARLTKHETHAAKVTSTAAEASSRHAQQLHDLAIELKKLSDYVGGADAAFAAKVDRIEGALGALVNRDQVDRQVAERISTTLKELRLSEGARQFVSRADFEAHVERADGLVKALVKDDQLDNRVAENIKRTLRELKLDDGGRSAFVSRSEFQAALEALGAGVNGNDGSTDGTVSAVSASAVLAEIEQLRAQHAAAAESLNAGLDAIEKMRSRQRQLEFELESLNDVASQHQQQQHDATAADVNRIAERVVLLLQQRGLLADVGASRDGEESGSVAPDQIYAMIQSAIDLYDADRVGMVDHALVSAGAKVLRHCTGSTFAPAWLSILGVHFTRATTTPEMALSVDTTPGNCWAMNGQNGNLTIHLAHTIVPTMFTIDHVPSVLNTNVASTPKDFRVWGLANDCAQDGIFLGAFGFNISGPSRQQFHVE # PASA_UPDATE: g13584.t1, single gene model update, valid-1, status:[pasa:asmbl_6612,status:12], valid-1 NODE_3822_length_2680_cov_31.5754 . gene 40 939 . + . ID=g13584;Name=g13584.t1 NODE_3822_length_2680_cov_31.5754 . mRNA 40 939 . + . ID=g13584.t1;Parent=g13584;Name=g13584.t1 NODE_3822_length_2680_cov_31.5754 . exon 40 194 . + . ID=g13584.t1.exon1;Parent=g13584.t1 NODE_3822_length_2680_cov_31.5754 . CDS 40 194 . + 0 ID=cds.g13584.t1;Parent=g13584.t1;5_prime_partial=true NODE_3822_length_2680_cov_31.5754 . exon 290 939 . + . ID=g13584.t1.exon2;Parent=g13584.t1 NODE_3822_length_2680_cov_31.5754 . CDS 290 653 . + 1 ID=cds.g13584.t1;Parent=g13584.t1 NODE_3822_length_2680_cov_31.5754 . three_prime_UTR 654 939 . + . ID=g13584.t1.utr3p1;Parent=g13584.t1 #PROT g13584.t1 g13584 PTPSVMTADLTPVLASRRVRGSALNLFSSADKSDRSALDASEVRVFSHLERRATAKSDRRRGQRQRDITSRAADIIEASSSLASAAAAASLTSAPTTTAAQHGGGPAHSLTPPTASGVGAKGSLSAANSAPPSRAMSPVAGASGAGASASLLAPPRPNLLRPGSGSRGRKQA* # PASA_UPDATE: g13585.t1, single gene model update, valid-1, status:[pasa:asmbl_6613,status:12], valid-1 NODE_3822_length_2680_cov_31.5754 . gene 1094 2605 . - . ID=g13585;Name=g13585.t1 NODE_3822_length_2680_cov_31.5754 . mRNA 1094 2605 . - . ID=g13585.t1;Parent=g13585;Name=g13585.t1 NODE_3822_length_2680_cov_31.5754 . exon 2512 2605 . - . ID=g13585.t1.exon1;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . CDS 2512 2605 . - 0 ID=cds.g13585.t1;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . exon 1824 1960 . - . ID=g13585.t1.exon2;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . CDS 1824 1960 . - 2 ID=cds.g13585.t1;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . exon 1448 1614 . - . ID=g13585.t1.exon3;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . CDS 1448 1614 . - 0 ID=cds.g13585.t1;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . exon 1094 1267 . - . ID=g13585.t1.exon4;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . CDS 1243 1267 . - 1 ID=cds.g13585.t1;Parent=g13585.t1 NODE_3822_length_2680_cov_31.5754 . three_prime_UTR 1094 1242 . - . ID=g13585.t1.utr3p1;Parent=g13585.t1 #PROT g13585.t1 g13585 MCLADRTSEARDAETYDTLMDDESSGPGPQRSVEGWIVFVTGVNEEALEDQLHEKFGEYGAIKNLSLPPDRRTGFIKGYALVEYETKKEGQAAIDNLDGSDLLGQAISVSWAFVRGPDSAGNAHGGRSRGGRRNNNNRRR* # ORIGINAL: g3395.t1 original gene structure, not modified by PASA NODE_1262_length_12592_cov_40.594 AUGUSTUS gene 4333 5454 . - . ID=g3395;Name=g3395.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS mRNA 4333 5454 . - . ID=g3395.t1;Parent=g3395;Name=g3395.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS exon 4333 5454 . - . ID=g3395.t1.exon1;Parent=g3395.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS CDS 4333 5454 . - 0 ID=cds.g3395.t1;Parent=g3395.t1 #PROT g3395.t1 g3395 MDFTDTLAGLDALCARLFTHDPHLLGAAIEKRKRRLSIGTLATSTKLTLDSTQAGIEREWNDCFAATINPEETIEDSLLPFESHFGSSCDSETASVMTWPQSDVDTWSCASPSEVVSGVPSPVAHTPFHVDDGLLIDNDAVDLAAIDYCMPHMPWDSFSAGALSPRLPSCDVLDQWPSLDTFQETAVFSDATPCANTTCATETAACAVSGSLKPASFAPQCAHHTALSDTVQPGKRVRKQKAQQTPKRIKSPTKSKTRPSAPATSVYYTPYQPLRKPSHPTRQANSAHYIVPMMQTSSPVRQLLQSRLKAAGCAKSLLKTVGGGQHMRDSDAMVPLGVSGCPLPPLGADDDAIIEGLQSMSRAMAQLVGVCVV* # ORIGINAL: g3397.t1 original gene structure, not modified by PASA NODE_1262_length_12592_cov_40.594 AUGUSTUS gene 10697 12437 . + . ID=g3397;Name=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS mRNA 10697 12437 . + . ID=g3397.t1;Parent=g3397;Name=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS exon 10697 11115 . + . ID=g3397.t1.exon1;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS CDS 10697 11115 . + 0 ID=cds.g3397.t1;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS exon 11379 11522 . + . ID=g3397.t1.exon2;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS CDS 11379 11522 . + 1 ID=cds.g3397.t1;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS exon 11775 12013 . + . ID=g3397.t1.exon3;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS CDS 11775 12013 . + 1 ID=cds.g3397.t1;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS exon 12360 12437 . + . ID=g3397.t1.exon4;Parent=g3397.t1 NODE_1262_length_12592_cov_40.594 AUGUSTUS CDS 12360 12437 . + 2 ID=cds.g3397.t1;Parent=g3397.t1 #PROT g3397.t1 g3397 MRFKKTEVCQTCSKIKNVCQTCILDLEYGLPVEVRDKALGMAGNVPTTDVNREYYVQNAEAELAAANDPTAPAGDIGKATAPTDLLRRLARSQPYYKRNRAHICSFWVKGECKRGDECPYRHEMPTDPNDPLAKQNIKDRYYGVDDPVASKMMNRAANSPALEAPADKSITTLYVGGIEPSTTDQDLRDYFYQFGEIRNIHMVTRQACAFITYASRADAETAASRSFKNAVIKGKPLRVTWGKGQAERGAPGEAGGVALSTVPGLPTASPMPAAYQGYVAQYGGQAPPPPPPG # PASA_UPDATE: g3396.t1, single gene model update, valid-1, status:[pasa:asmbl_1001,status:3], valid-1 NODE_1262_length_12592_cov_40.594 . gene 6426 8187 . - . ID=g3396;Name=g3396.t1 NODE_1262_length_12592_cov_40.594 . mRNA 6426 8187 . - . ID=g3396.t1;Parent=g3396;Name=g3396.t1 NODE_1262_length_12592_cov_40.594 . five_prime_UTR 8101 8187 . - . ID=g3396.t1.utr5p1;Parent=g3396.t1 NODE_1262_length_12592_cov_40.594 . exon 8005 8187 . - . ID=g3396.t1.exon1;Parent=g3396.t1 NODE_1262_length_12592_cov_40.594 . CDS 8005 8100 . - 0 ID=cds.g3396.t1;Parent=g3396.t1 NODE_1262_length_12592_cov_40.594 . exon 6426 7910 . - . ID=g3396.t1.exon2;Parent=g3396.t1 NODE_1262_length_12592_cov_40.594 . CDS 6765 7910 . - 0 ID=cds.g3396.t1;Parent=g3396.t1 NODE_1262_length_12592_cov_40.594 . three_prime_UTR 6426 6764 . - . ID=g3396.t1.utr3p1;Parent=g3396.t1 #PROT g3396.t1 g3396 MGKATNGKIETDKVKRRTVIPPGTHVACINCRQGHRKCNAASPCSDCIRLGIEDKCVYLPPGRKGRKPKVRPATVQVTSPLSAQKPPTAHSQSAIAKTKASKMLATEQPPARINMSKQAPTVSMSLLSPPMETDSRKSRFAFPESTLDVFSALAQEVADFEASWTAPMFVAAAQTPLSPGESLDYDAAIGAGVLQYQAPPAMGHAHPYLETNKFAQSNLNSLQFGGRLVEGAHIQQQHATVTIPGTDLRIPCITSAPTPLTLQMHQRSSLDGALGGSLVTPPASRRTSESDADQAQQQQIRRISTSNLLRVGADNHSSLRGVIALSDEMAQLLATQASECYVLHGNQHSQYAHGPFAYGGGDVSCAAALPSFYQSSNGGQTMPTMQSYEATMYGDSSSCLVPGLLNKDVYMAR* # PASA_UPDATE: g3394.t1, single gene model update, valid-1, status:[pasa:asmbl_1000,status:12], valid-1 NODE_1262_length_12592_cov_40.594 . gene 421 3400 . - . ID=g3394;Name=g3394.t1 NODE_1262_length_12592_cov_40.594 . mRNA 421 3400 . - . ID=g3394.t1;Parent=g3394;Name=g3394.t1 NODE_1262_length_12592_cov_40.594 . five_prime_UTR 3396 3400 . - . ID=g3394.t1.utr5p1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . exon 3146 3400 . - . ID=g3394.t1.exon1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . CDS 3146 3395 . - 0 ID=cds.g3394.t1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . exon 2506 2760 . - . ID=g3394.t1.exon2;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . CDS 2506 2760 . - 2 ID=cds.g3394.t1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . exon 1312 1840 . - . ID=g3394.t1.exon3;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . CDS 1312 1840 . - 2 ID=cds.g3394.t1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . exon 755 881 . - . ID=g3394.t1.exon4;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . CDS 755 881 . - 1 ID=cds.g3394.t1;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . exon 421 519 . - . ID=g3394.t1.exon5;Parent=g3394.t1 NODE_1262_length_12592_cov_40.594 . CDS 421 519 . - 0 ID=cds.g3394.t1;Parent=g3394.t1 #PROT g3394.t1 g3394 MCITVTYVAQTVLLFLCKKKFVLFLGPRCCCGGPWVMHCCLRHRKAIMGPTFTLVVLKVVFSMALFVCTTATTPPRCLLANETVAMRTGVNAIHFGVGNWDSAYLNTEIAKILIEEKMGIPVTYEVVAADAAFDRMSSSNATMDAYLELWAHDDLINRYINSDKTVINAGPLGPVGRVGWFFPEYVTEYQADLDSWRSLKYQENVLLYNDDPNSIISNGTFMGRKPATAQQIAANVTSLLSTLASCVNDTQASGTCVAGHSACKTAVQGYIDSIGNGSTGSASSVGVFYGVPDDWDHHNDDIIRNLGLNFKSVIMGYTGNGVEANLIDAITTHYNARRPVLIYFWTPHQIFHSLSGIRLRRLQLPEWSEDCNSKARTGGWNCDYKMEVLLKTASGSLTKRNRRVLEFVKQFQYFTEGKD* # ORIGINAL: g8381.t1 original gene structure, not modified by PASA NODE_2546_length_5927_cov_42.5547 AUGUSTUS gene 1048 2154 . + . ID=g8381;Name=g8381.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS mRNA 1048 2154 . + . ID=g8381.t1;Parent=g8381;Name=g8381.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS exon 1048 2154 . + . ID=g8381.t1.exon1;Parent=g8381.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS CDS 1048 2154 . + 0 ID=cds.g8381.t1;Parent=g8381.t1 #PROT g8381.t1 g8381 MMIPANTNEQQADLRWDPHPPLIITPVVLPATYLHPISPWTSGLSVSVCTRGTRGILHEHDRGIFGPVADTLASPVWAQMRIGVAGIEAHAHDSPSSARFAKFGSEPTFTLIADGGVEVPTSASDNKAQLLELSAYLPPETHQCDGISCDGPDGVCTGRHSAHISGDQCVGEWDRFQLPAATAHTAHNAHNLHDCEADASDKCEAILTHTNSDASTLLGCSGSFHLSFNSSDEVASYSSEQKMRIHAPEDERCTPDHKYTHMTAIATTAVHTAMQAVPGAQTSEAASAVVVPFVHVAESPRAAHTTAILQAAGDWLRRKNSHSCGHVRPHVTANTPEQPARRKCTAGKSGTDRRRRNSKTTYTDALKP* # ORIGINAL: g8382.t1 original gene structure, not modified by PASA NODE_2546_length_5927_cov_42.5547 AUGUSTUS gene 3777 5561 . + . ID=g8382;Name=g8382.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS mRNA 3777 5561 . + . ID=g8382.t1;Parent=g8382;Name=g8382.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS exon 3777 5561 . + . ID=g8382.t1.exon1;Parent=g8382.t1 NODE_2546_length_5927_cov_42.5547 AUGUSTUS CDS 3777 5561 . + 0 ID=cds.g8382.t1;Parent=g8382.t1 #PROT g8382.t1 g8382 MAANGVLFALGKGKGCRRHVTSHRQLPWSMQQLPTLSGSRVGEDDNGNNGLDFAAQPHWMQSIDYWGQPSCTCENDCQPIDVAEEELPAAASAASKLQQSETCHGLWATLLDTDTDEEDGRSDCCEGMWESHDGATTLTSAGARSLVAGDVMDDSAAAARSACEITTDYTDDLQYCLSPSTAETLFGSDSGYFESSHFPQADQMHTQGLGDSSCMRPCSPDPFVPASAWISDASFVRNANTPSANAQSCAGSVQIAVPTAPSTCTFLHIPTNDAVDNRESQGTHPAMRTSMHKEPPAAPHITQSIHVRPPPSTVVHTASEWLRKRPSDDERESVSDAHQSDGRQWSAGKSHDAHLTAPSLLGADSCVMPIVSSRTMAGTAIMQSPADNTRDTKDSTYASHPIVENRGRQTDSPLMEFINVARKRRSADRERVQWTSTIHNGDYNSKKRRRSADEICDLASLTGHTMETRDGRQRKVKVELDTPISLVDCTGGGCAPPLPTHAVHSKATGVSAARRMVWHEYQHGHVSDNTGAGVTTANPAEHALPARDAIIADSTRMMWAYSFKRTHRADVVDLVRKSIGNAGDSGVVFMHMPP* # ORIGINAL: g12471.t1 original gene structure, not modified by PASA NODE_214_length_31256_cov_48.3948 AUGUSTUS gene 26084 30377 . + . ID=g12471;Name=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS mRNA 26084 30377 . + . ID=g12471.t1;Parent=g12471;Name=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 26084 26134 . + . ID=g12471.t1.exon1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 26084 26134 . + 0 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 26570 26652 . + . ID=g12471.t1.exon2;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 26570 26652 . + 0 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 26826 26972 . + . ID=g12471.t1.exon3;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 26826 26972 . + 1 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 27160 27436 . + . ID=g12471.t1.exon4;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 27160 27436 . + 1 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 27782 27962 . + . ID=g12471.t1.exon5;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 27782 27962 . + 0 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 28196 29554 . + . ID=g12471.t1.exon6;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 28196 29554 . + 2 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 29708 29894 . + . ID=g12471.t1.exon7;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 29708 29894 . + 2 ID=cds.g12471.t1;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 30032 30377 . + . ID=g12471.t1.exon8;Parent=g12471.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 30032 30377 . + 1 ID=cds.g12471.t1;Parent=g12471.t1 #PROT g12471.t1 g12471 MPLCGNRWNCCQHEAQQLISTAESTVDSLQQLVVTTYRRLYPSDRPFLADRLQDGDGCDIPPDYLVGDVFSDRAIVTVVEAGVETPSEDAQPESAMVTDVLPVNGKVAKKRKVDEIVVIDADVDLVKEVVNPPTKKPRKEREKSAAVAAAVAVEPVSVAANKSVAVQSRKQSLVVDAQEKVPILGKRKKGTSDTSSSDCSSDSELRRKVRRESLASVGSTGEAHASGAEVQSPGVLTRAQVERSIREIVDAMPEDRVGKLTQRFVWKQLQMKHARRVEPHREYAYERSLPLIAERAIQSSRPKGASRDVNGADRAADAVNRSAVAADLLAVQQADAEEERAPALRLAAAAAAVKTEKVVTAASSDDSSSSDDDEDADENASSDSDDSSSSSSSDESDGEAGSVERKVKTVEDEERIASEVAHAATAADSDESGSTSESSSSESSSESGSESEGSEEGEGEGSVSAVAVVKLAASDKKIAKEVSSSESEDGESNDSDSSSSEEEANGKEEVKKNKEAVRPTVKVDGGKNSAAKAPAKSASAPKAAAVAIAIPASSSSENSDDSSDSDSNSDSDKDKSEKSAASVKSSASGLSADLRVHSLSTLARVMSASARVSSDSSSSESEDEVEPTKTTNGAAAMTPAGRVGAKSANGTRKENGKTSATKVESGSDGDSESSDSDSSEATKKRKISGKSVLADLALDATPGSVAAPVVEKVLSESAVKRQKEVDRRRSKTALKVAAAIAPPSTLNTLTNFGTPSLGMPMSLHSQRVSLTPLESRLSMLATPTPSLPNSPLVRAGFTNGSAVNSVLNTPLLSNVGERALKRQQSLQRKALQHQQKLPDGGRKSLLTQEDMTLLSDGTKGVEKLLRDSARWSDDDV* # PASA_UPDATE: g12469.t1, single gene model update, valid-1, status:[pasa:asmbl_3623,status:12],[pasa:asmbl_3626,status:12], valid-1 NODE_214_length_31256_cov_48.3948 . gene 20445 25075 . + . ID=g12469;Name=g12469.t1 NODE_214_length_31256_cov_48.3948 . mRNA 20445 25075 . + . ID=g12469.t1;Parent=g12469;Name=g12469.t1 NODE_214_length_31256_cov_48.3948 . five_prime_UTR 20445 20557 . + . ID=g12469.t1.utr5p1;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . exon 20445 20662 . + . ID=g12469.t1.exon1;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . CDS 20558 20662 . + 0 ID=cds.g12469.t1;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . exon 20816 21001 . + . ID=g12469.t1.exon2;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . CDS 20816 21001 . + 0 ID=cds.g12469.t1;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . exon 21104 25075 . + . ID=g12469.t1.exon3;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . CDS 21104 24742 . + 0 ID=cds.g12469.t1;Parent=g12469.t1 NODE_214_length_31256_cov_48.3948 . three_prime_UTR 24743 25075 . + . ID=g12469.t1.utr3p1;Parent=g12469.t1 #PROT g12469.t1 g12469 MDATLAANAKTRGSAKRSSNSRTPGSRRTQKSSGKSSRRRKSSASDEENDPGYTTRCICGFKHNDEFMICCDKCNVWQHMDCMGIDRGNVPSEYFCEACQPRVTNPRRAAEIQRKKIEELSSDELSADDAAPAAEDAKRRRSSTSAKPASASTVASNGSTNASRKRASNASAPPRKRQKPSQRTAEDGDGITINDDDNSASDEDLMAWEESGNNPFLAPYIYISKNNYDAWTPAVKADDEGDQQLEDSATSAIEVVSRYELAQSAEAQAPIEGPSHGVFGGADTDLPQVAISLVDAKGSKGARQRRGLFAEDDIESGRLIVDFRGRVLAPAQLEQVLGSDTKPLVSRPYPFALFFPRLNVCIDGTMFGSEARFVRRSCTPNAETRDFHVDGKVHVGVFALYDICRGDEVTVAFDYAFDDKLYPIECACDLESCLVKESNERRRRSGIFDDNRPRRKKPRLDSVDAGNQDGTTDGHPNGLPVGESKRRRDPRRRKSLSPAGETTEGSLIPPHAQQQSLRQQSQGPADDGTPHDMNGALKPPASGRKQLSRQQSQDEGAPVNFTVAAPAPTPTPTPTAGPRGRSGSNPTNPLKEQQQQPLADDHADDRFLSREERKLQAILRQIEKMENVNPAPSTATPSSRKDSVGASSARKRGLSMGERDLSPNRKRARSQPQTPMIDRDSYRDDAITDTLARQRGSRRPSTGSQGRTHGRPSENGMSSGSNSKSASSASSSSSSSSSSESESESEKADANGKDTKPDAGAFAAPKFGKKAWVKEFMETGAAAIDVKPVSKPESVISPRGDESVAIAGKKAWIRDWTQPQAQPSPAAGAVVVVKKEEETPVPMGGKFALKKKVLSTFYGDTAAAASSPPPVGTSVVKVDSSVSDSADGLGHAHPHTHLHPRPLDLSSTKEVLPSTPQNAAVDTKVEPEPFKPDGDAACSTATDSAPSAPQDPIVASLSAGSTVEPITPTKKKVSLGDYLKRRTSTTARAASEGVAASSPVTATQAPPSQPPLTPVVEERPLSAEVANSPSSALLPAPSVAPPSLLPAPPVTGASVLSAEIADNRISGPPGTNDFRPPGSGGGGGGGGGGGYGYPPPATGARPYGAPPSGYGGSSSHYDNRPPSGPGGPGWRGNDRWMPPPRGGLNNGPSWGDNRGDNGRGRERSVSESRGYGAPPPSSWDSRYRDGGGGGANDRPSSNVPHWDGRNGHTGAGLPVQLQQHHSLGGAPPSSAGHYDAPGTQGSEPMDIDQDDGPSAKGTILFARSSSGNGVGGNGISSVSDGVGGGRGGLLPAPVSKPPYSDQWSGGYRH* # PASA_UPDATE: g12467.t1, single gene model update, valid-1, status:[pasa:asmbl_3622,status:12], valid-1 NODE_214_length_31256_cov_48.3948 . gene 153 12980 . - . ID=g12467;Name=g12467.t1 NODE_214_length_31256_cov_48.3948 . mRNA 153 12980 . - . ID=g12467.t1;Parent=g12467;Name=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 12899 12980 . - . ID=g12467.t1.exon1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 12899 12980 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 9243 12708 . - . ID=g12467.t1.exon2;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 9243 12708 . - 2 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 7936 9037 . - . ID=g12467.t1.exon3;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 7936 9037 . - 1 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 7612 7737 . - . ID=g12467.t1.exon4;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 7612 7737 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 7228 7325 . - . ID=g12467.t1.exon5;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 7228 7325 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 6789 6897 . - . ID=g12467.t1.exon6;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 6789 6897 . - 1 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 5787 6626 . - . ID=g12467.t1.exon7;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 5787 6626 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 5274 5485 . - . ID=g12467.t1.exon8;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 5274 5485 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 4882 5053 . - . ID=g12467.t1.exon9;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 4882 5053 . - 1 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 4581 4723 . - . ID=g12467.t1.exon10;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 4581 4723 . - 0 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 1278 4249 . - . ID=g12467.t1.exon11;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 1278 4249 . - 1 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 718 1020 . - . ID=g12467.t1.exon12;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 718 1020 . - 2 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . exon 153 486 . - . ID=g12467.t1.exon13;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . CDS 476 486 . - 2 ID=cds.g12467.t1;Parent=g12467.t1 NODE_214_length_31256_cov_48.3948 . three_prime_UTR 153 475 . - . ID=g12467.t1.utr3p1;Parent=g12467.t1 #PROT g12467.t1 g12467 MNRFFIVEKILGERVKKGKLEYLIKWKDFDHDKNSYEPSENIPLIVVEAYRKRKDAAREKESQRKRSRSPHADKNDMPQKIARVESGSPTAINRRKKVRRIIQSSSDSDDDGTASAHVTIGSLPGREKRAHTPTSSPDNESHGEEEMPIIVPFDPNDITTNDDICTSCKEVGELLCCDGCPLSFHLECLGLAELPEGDWFCNACSVLRKEEEKKKAHRRPTRTEKAKIVRHRTRMLENKRAETAEGVRNEDDRWKKRDEEDKTQSRERRERDDSDDERKDGMNKRGSSEAARRDETPQKHKQRGERGEERRTSRASEDVTKSEMRSDAKSAKASTLSAVSAVRGNGVTVAPPSQVAPPAFVKSLPHEKAKADIASDAQAILRSNTATRDSHGVLTAPTVHTFTPIPAAPGRPVPAPPVKEIIPAEAEIAPGLPVKANPSPVASVKANPSPVAPVKANPSPVAPVKANPSPAAPIKTTLATAALVPLNISPVALVKANPSPVDPVKTTLATAAPVSAPVAHDKETIPGVARIPSAKIASAPPVKVSPARAAPVKESSPVAAKIPSAKTAPAPPVKVSPARAALVKEASPVAAKIPSAKTAPAPPVKVSPARVAPVKEASPGVAKIPSAKIASVPPVKVSPAPVAPVHVFPVKEASPAAAKITSGKIASAPPIKASTAPATPLNVSPALAAPIEVSAVRAASLVPAFVAIRPRPTTGRSGDTKQKSWTHEWNFVSDKSGMPRKSIAGESVRQTGRTDGTASAVNDRSLVTDDDESFPPSTLLRAPRARTTINVVKPKSMPTEPVTNVAPPHAAIMTSATSNTLPNEARNVPTKAMPAPATDVAPNEVPRTPTSSSLQRAGNIPSTEPLKSAFPPSIVTDRPSKATVTEQTNATLDSPPLLDSTQSFLPTAVVATHSTTQLAVKSCAHVVPVSALPGTDSSVASLQAEAGSVNKGKAPENPAARDTVKLEGAKCDDVGDGSGLNPARLLTYCARDVPLTVEKDECTVCDEGGDLLVCDGCDDPFHIECVGLSGIPDGDWYCGKCQDLGMDHEDFCFECLEVGTLLMCDSCQRSFHMNCISPRMQGPPEGDWHCGYCTSGKPKGKPRRGATMPKRELVHRTECSKCSSGDREVEGRMFMLACATCPESMHTGCAAAAAAAVEFAADGRWFCDSCRTAMVVNMAGAQSAPRPPPLVPPPVQLPRRQQQCEKCKKRTNMLEDLDVLECRLCPVSCHISCTDPPLDKELSRPSIWLCVSCRPCCVMCLQSAPVPFSPESLALQFMFCSRCLAWFHWWCVGMTPDATKYFGGVCCKDCQRWPKQIGSILAYRLTTSSSAEEEGERALSTLRQECLDRMWFHNKRPDKRGSAVAPDETNDAETGGHTKVWALNKLRREYLVQWQGRPHRENEWVSREYLVRIARRKVDKFDKDNALPGTESVVVLRAWKEIDRVLTLNDDRTKALVKWGGLPLKDATWEDASANSLMSDPALARAVWRCDRRNHAPAATPRKKMRGEVQEYVTQPSFMTGGELKAHQLEGLNWLMYERRKKLNCILADEMGLGKTIQAAVFLATIRQQMGVRALSIILVPLSTIGNWEKELAKWAPMLNVVAYIGDAQSRELSRQYELFYPFKREPKFDVLLTTSEMLGNDDALMSILKGLEFEELIIDEAHNKLKGAKSKFAADLRRITAKHTLFLTGTPLQNNMAELYTLLSVLDPTEFKKQESLFREFDILDTSSKKKKKKSPGVASASGAMAAATHAPVMDKSADSGDGGEKDGAADPSEKDVSVGHGVRADAGADVSADVAEETPVAKITDARLEQLQNLLRPRILRRLKRDVQLDIPPKVEIIVPCKMSALQRDYARLIITKNYELLNSISSMSAKAAARAAGDGGSGGAGGAGGAGGREVAGLAGDTKARKVSLSNIYMELRHVANHPYVIAGAEPVCSTLDETFHRLTQASGKMVLLDALLPRLLADGHRVLIFSQFKGMLDIIDDYLAYKQCAHFRIDGDTPQESRQHMIEGFNKAGSTVGVFILSTRAGGLGINLPTADTVIIYDSDYNPHGDLQAASRAHRMGQTKKVMVYRLVTEGSVEEGILQRAHRKLMLEHVIIKNMNEEIDESVVQKMLKQVATRMFEGTGEDSLTADMGHIAAVQYDPAVIDTLLDRNAHGSGTGEEVVETDDGFLSFKVARPWLDELPTAATAAEGGDSATVDNADNDDALFWERMLKKRFEEMLQNREQEALGKGMRVRKAVQYFEETANDRKRRRDDTEYIPGPDDEVEEMDGVGESDAHDSPNQQERELAELLGGERASKVDVPPTATAGAVAGGGRKEVEKRRRESGLEGSERKRPKIGALTDVEIAQQIDNAMQETLVPRARPTKPTPIQKAVSRAPPSKQSSLNAWDDGPASGIPQHTDRLQRSFSDTRAEGHVAMGASGYGDETVQGGAHDSQLRLQHQHQPQQQQHQYQQMPGRQHMDRRGLMWQNPDALPGQAGMRQNGFYPPVLSGPTCAFMDGNGVRCTAPVHVSTMRFCFSHHLAADCLKLADSERRFQSIMKQDIRMWEHGDKADPKGMALFRERFDETHNFMSRRVEVARLASPSEIAKQQRAALEQQRNRIQTDYSLLGRRWNAESQHGQMLNRPPVQPAPVFAPQRVVYCRHRAPDGTLCVNVASKGWMCIYHSADVDVSNLACVDLTTDESENVARDVPWHELPSKASAHAHARAPDVTSQLASSREPFRGSMVRGQPPPASMPATTVRIDARGVVTDWGPSNSERPSTATQAFQSAHGMRPIHAGDSSYGWTPAAIGNVAIGQSGRYPDVHPGNLVNGYAPRSQLSMTHVEPPRRDSYRSEEYRGNEGYQYQNEPFSVRQSAATAHPLPRMPADAAVGVTWTAEDARAQWAHHDATMARAHLPHGIENAGGGRNHIQGGWAGESNQARLRARPAPDPQATLRDARSSHMAQSGGATAVSTAGSFSAPLRNANGVNLGEDATGRSNQASRDGPSAYGGPGVPVDASGHAAAAPNTAPSAPSSVTVPNTVPIAPSAPSSVVASNTAPVVVAPSAIATPVPAAPVAPIAPVAPAVDAVSSAAAPVGDTIGGTSNQPIPTSEDDPVRVPEDRENVNDGLSQLHGSDDSAASSSDEDGDVKFVCGFRVFRGREPCRNRALSAHEFCPPHRKALAKMGRPNFNLCSHFTEGVRCRKALANVGTSVYCARHERGDPSEGSS* # ORIGINAL: g12470.t1 original gene structure, not modified by PASA NODE_214_length_31256_cov_48.3948 . gene 25065 25944 . - . ID=g12470;Name=g12470.t1 NODE_214_length_31256_cov_48.3948 . mRNA 25065 25944 . - . ID=g12470.t1;Parent=g12470;Name=g12470.t1 NODE_214_length_31256_cov_48.3948 . five_prime_UTR 25927 25944 . - . ID=g12470.t1.utr5p1;Parent=g12470.t1 NODE_214_length_31256_cov_48.3948 . exon 25065 25944 . - . ID=g12470.t1.exon1;Parent=g12470.t1 NODE_214_length_31256_cov_48.3948 . CDS 25081 25926 . - 0 ID=cds.g12470.t1;Parent=g12470.t1 NODE_214_length_31256_cov_48.3948 . three_prime_UTR 25065 25080 . - . ID=g12470.t1.utr3p1;Parent=g12470.t1 #PROT g12470.t1 g12470 MPGPFAHLLYGLGVGGILQHASTGRFSNRHCAILALNGFLGPDVGSFLEWLTSSTIPAVGDRMMSWVHDPVVYVLVVAPLMGALYVRIIASRRVCTLLGETPSASTDLAEDRPAIRLTYSQCFMLCAAGGLNHFFFDTIFEDDGRTPLFRRIIDTGWWKDVPPLSPFHVILVGTVTLTLFGGYFGITSLRPRRCHNNGIPSASEKSCLAVELLNNPSARLFVFLSAVSVVYGGLLAWGRVWSVPPYPLIGEEADLGVVPFYLVFSLLPMFLCLWSMSPPVI* # ORIGINAL: g12468.t1 original gene structure, not modified by PASA NODE_214_length_31256_cov_48.3948 AUGUSTUS gene 13951 17762 . + . ID=g12468;Name=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS mRNA 13951 17762 . + . ID=g12468.t1;Parent=g12468;Name=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 13951 14576 . + . ID=g12468.t1.exon1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 13951 14576 . + 0 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 14844 14985 . + . ID=g12468.t1.exon2;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 14844 14985 . + 1 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 15155 15284 . + . ID=g12468.t1.exon3;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 15155 15284 . + 0 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 15489 15588 . + . ID=g12468.t1.exon4;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 15489 15588 . + 2 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 15909 15972 . + . ID=g12468.t1.exon5;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 15909 15972 . + 1 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 16075 16145 . + . ID=g12468.t1.exon6;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 16075 16145 . + 0 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 16396 16591 . + . ID=g12468.t1.exon7;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 16396 16591 . + 1 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 16767 16960 . + . ID=g12468.t1.exon8;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 16767 16960 . + 0 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 17202 17364 . + . ID=g12468.t1.exon9;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 17202 17364 . + 1 ID=cds.g12468.t1;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS exon 17490 17762 . + . ID=g12468.t1.exon10;Parent=g12468.t1 NODE_214_length_31256_cov_48.3948 AUGUSTUS CDS 17490 17762 . + 0 ID=cds.g12468.t1;Parent=g12468.t1 #PROT g12468.t1 g12468 MRPTVVSSDEETVREGKEKARKGKGKKKDKTGKKSKRTKSEERTPSDDVSVDVDARGDKGAPGDAPLFGHWDVDNADDIHNESMDGFRSMDKQKNVPGSGVPSAISRVRKDSDPLLPGAVARRRSSTTKVRGSSMNEADQTAITIQSVNGDVVGKETFARSSSSYGAILPAVSESPTLKSFRLFKRRWIMLFVFSLLSFSNALMWITFSPIQTIVMEYYSATALEINWLSLVYMVAYIPFVFVSSLLFDKKGLQYGILIGGALNCAGGWVRYIGAVKQSLFPLLMLGQTLAALAQTFILGVPSELAATWFGEKETATATGIAVMANQLGTAIGFILGPALVKTSNDYPMYMLYQAIFVSVLLLLTILVFRKRPPTPPSQSAASRLEGKKEEPTLRSYLMEFKKLFWDRDFMLLLTGYGVNVGCFYAISTLLTDIITPQFPGHDDDVGWIGFVNVIAGMAGSVLCSFYLDRTKRYRLVTIVVYCGSLVSVVGFAVCVMNWTLMSVYVMSGVFGFFMTGLIPVGFEFAAELSYPVAETVSSGMLNMSAQIFGVVLTLSMGKLQKVSVGKIGMDLASWSMTGFLIVGFVFICFVREIKRRAMAERNGGAPVGANKISPSMDSLPTLSPRQSDGSGVTVPLTSPGKDRPAPKSAWS* # ORIGINAL: g1329.t1 original gene structure, not modified by PASA NODE_1961_length_8343_cov_41.5975 AUGUSTUS gene 5719 6352 . - . ID=g1329;Name=g1329.t1 NODE_1961_length_8343_cov_41.5975 AUGUSTUS mRNA 5719 6352 . - . ID=g1329.t1;Parent=g1329;Name=g1329.t1 NODE_1961_length_8343_cov_41.5975 AUGUSTUS exon 6005 6352 . - . ID=g1329.t1.exon1;Parent=g1329.t1 NODE_1961_length_8343_cov_41.5975 AUGUSTUS CDS 6005 6352 . - 0 ID=cds.g1329.t1;Parent=g1329.t1 NODE_1961_length_8343_cov_41.5975 AUGUSTUS exon 5719 5811 . - . ID=g1329.t1.exon2;Parent=g1329.t1 NODE_1961_length_8343_cov_41.5975 AUGUSTUS CDS 5719 5811 . - 0 ID=cds.g1329.t1;Parent=g1329.t1 #PROT g1329.t1 g1329 MFPHTIRTATIGGKLTIRDAVRRIAVSAANLQPTVLGGPSSFNRDRMAGENLAGDPAACEAAAQRDDVTPVREENRRMGAKENDSGMLSEEDAMLRTTSQSSPDSAPVKEDFVSMTSERAPDKVGPKAKGAGGRGSKKRETNAVPN* # PASA_UPDATE: g1327.t1, single gene model update, valid-1, status:[pasa:asmbl_3115,status:12], valid-1 NODE_1961_length_8343_cov_41.5975 . gene 556 3262 . + . ID=g1327;Name=g1327.t1 NODE_1961_length_8343_cov_41.5975 . mRNA 556 3262 . + . ID=g1327.t1;Parent=g1327;Name=g1327.t1 NODE_1961_length_8343_cov_41.5975 . five_prime_UTR 556 638 . + . ID=g1327.t1.utr5p1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 556 656 . + . ID=g1327.t1.exon1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 639 656 . + 0 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 829 900 . + . ID=g1327.t1.exon2;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 829 900 . + 0 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 1211 1351 . + . ID=g1327.t1.exon3;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 1211 1351 . + 0 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 1888 2031 . + . ID=g1327.t1.exon4;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 1888 2031 . + 0 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 2245 2350 . + . ID=g1327.t1.exon5;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 2245 2350 . + 0 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . exon 2555 3262 . + . ID=g1327.t1.exon6;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . CDS 2555 2682 . + 2 ID=cds.g1327.t1;Parent=g1327.t1 NODE_1961_length_8343_cov_41.5975 . three_prime_UTR 2683 3262 . + . ID=g1327.t1.utr3p1;Parent=g1327.t1 #PROT g1327.t1 g1327 MVVEQTPRGERYFDIYSRLLKERIICVMGPINDHSASLVIAQLLYLESEDPSKPIFMYINSPGGVVTSGMGIYDTMQYIRSPIATVCVGQASSMGSLLLAAGDAGHRKALPNSRIMVHQPSGGAQGQATDIEIQAREIINLRKRLNGIYVKHTKKPLKVIEEAMERDYFMSAEEAVEFGIVDEVLESRGNQPISGDPAGAKQ* # PASA_UPDATE: g1328.t1, single gene model update, valid-1, status:[pasa:asmbl_3116,status:3], valid-1 # PASA_UPDATE: g1328.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_3118,status:12], valid-1 NODE_1961_length_8343_cov_41.5975 . gene 3774 5328 . + . ID=g1328;Name=g1328.t1 NODE_1961_length_8343_cov_41.5975 . mRNA 3774 5328 . + . ID=g1328.t1;Parent=g1328;Name=g1328.t1 NODE_1961_length_8343_cov_41.5975 . five_prime_UTR 3774 3884 . + . ID=g1328.t1.utr5p1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . exon 3774 4041 . + . ID=g1328.t1.exon1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . CDS 3885 4041 . + 0 ID=cds.g1328.t1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . exon 4277 4362 . + . ID=g1328.t1.exon2;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . CDS 4277 4362 . + 2 ID=cds.g1328.t1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . exon 4647 4750 . + . ID=g1328.t1.exon3;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . CDS 4647 4750 . + 0 ID=cds.g1328.t1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . exon 4975 5328 . + . ID=g1328.t1.exon4;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . CDS 4975 5056 . + 1 ID=cds.g1328.t1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . three_prime_UTR 5057 5328 . + . ID=g1328.t1.utr3p1;Parent=g1328.t1 NODE_1961_length_8343_cov_41.5975 . mRNA 3777 5328 . + . ID=g1328.t1.1.5b6be70a;Parent=g1328;Name=g1328.t1 NODE_1961_length_8343_cov_41.5975 . five_prime_UTR 3777 3884 . + . ID=g1328.t1.1.5b6be70a.utr5p1;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . exon 3777 4041 . + . ID=g1328.t1.1.5b6be70a.exon1;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . CDS 3885 4041 . + 0 ID=cds.g1328.t1.1.5b6be70a;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . exon 4277 4362 . + . ID=g1328.t1.1.5b6be70a.exon2;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . CDS 4277 4362 . + 2 ID=cds.g1328.t1.1.5b6be70a;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . exon 4647 5328 . + . ID=g1328.t1.1.5b6be70a.exon3;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . CDS 4647 4880 . + 0 ID=cds.g1328.t1.1.5b6be70a;Parent=g1328.t1.1.5b6be70a NODE_1961_length_8343_cov_41.5975 . three_prime_UTR 4881 5328 . + . ID=g1328.t1.1.5b6be70a.utr3p1;Parent=g1328.t1.1.5b6be70a #PROT g1328.t1 g1328 MEGAKIREISSTQNPKTPHGMFFDDLGRIRVLEVERYNETQELREECKEFVDRINQFQEITGGFIDIVEKLAQEVDREKLKAIGSRNLLKSIAKQREAQQLQYHALIVEKEIELERLRAQYESLNKIKGDQEEFTEHFTMQK* #PROT g1328.t1.1.5b6be70a g1328 MEGAKIREISSTQNPKTPHGMFFDDLGRIRVLEVERYNETQELREECKEFVDRINQFQEITGGFIDIVEKLAQEVDREKLKAIGSRNLLKSIAKQREAQQLQYHALIVEKEIELERWVSRMELRLLTIYFHCVSCFIRNSRGIAFTSGTTELDVRHLL* # ORIGINAL: g7102.t1 original gene structure, not modified by PASA NODE_1158_length_13471_cov_55.8082 AUGUSTUS gene 10285 12201 . + . ID=g7102;Name=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS mRNA 10285 12201 . + . ID=g7102.t1;Parent=g7102;Name=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 10285 10356 . + . ID=g7102.t1.exon1;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 10285 10356 . + 0 ID=cds.g7102.t1;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 10897 11010 . + . ID=g7102.t1.exon2;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 10897 11010 . + 0 ID=cds.g7102.t1;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 11283 11312 . + . ID=g7102.t1.exon3;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 11283 11312 . + 0 ID=cds.g7102.t1;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 11675 11743 . + . ID=g7102.t1.exon4;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 11675 11743 . + 0 ID=cds.g7102.t1;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 12106 12201 . + . ID=g7102.t1.exon5;Parent=g7102.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 12106 12201 . + 0 ID=cds.g7102.t1;Parent=g7102.t1 #PROT g7102.t1 g7102 MARAALSAMEKTIPFGQYALHGSERFTELLPEEVADMFVSAQKVAKAIEMEYKADALTIAVQDGKLAGQTVEHVHVHVIPRHGGDFPNNDDIYKELEKHDKAGGRQPRTAEAMSEEAFRLSTYFRA* # PASA_UPDATE: g7099.t1, single gene model update, valid-1, status:[pasa:asmbl_594,status:12], valid-1 NODE_1158_length_13471_cov_55.8082 . gene 275 2435 . + . ID=g7099;Name=g7099.t1 NODE_1158_length_13471_cov_55.8082 . mRNA 275 2435 . + . ID=g7099.t1;Parent=g7099;Name=g7099.t1 NODE_1158_length_13471_cov_55.8082 . exon 275 430 . + . ID=g7099.t1.exon1;Parent=g7099.t1 NODE_1158_length_13471_cov_55.8082 . CDS 275 430 . + 0 ID=cds.g7099.t1;Parent=g7099.t1;5_prime_partial=true NODE_1158_length_13471_cov_55.8082 . exon 699 1706 . + . ID=g7099.t1.exon2;Parent=g7099.t1 NODE_1158_length_13471_cov_55.8082 . CDS 699 1706 . + 0 ID=cds.g7099.t1;Parent=g7099.t1 NODE_1158_length_13471_cov_55.8082 . exon 1955 2435 . + . ID=g7099.t1.exon3;Parent=g7099.t1 NODE_1158_length_13471_cov_55.8082 . CDS 1955 2038 . + 0 ID=cds.g7099.t1;Parent=g7099.t1 NODE_1158_length_13471_cov_55.8082 . three_prime_UTR 2039 2435 . + . ID=g7099.t1.utr3p1;Parent=g7099.t1 #PROT g7099.t1 g7099 ATHILRITQRSQIVLFRGHNETEKVHYIDDLIKVRPLLDDASPQPMPSTHGGKRPAHSSATSSTPAALPASGASATSLSTNGWESGYGSFRIDWRDDSSLVFTTSSPEKFFELLGAHITRHKSRKIRHISRLGEISEQRAILFDPTCPHHLMLAHELYSALTRVAQKQQSGLQSGLKVPASLTSLDGSGVPTSMDSIYGAAHDSTSSSSSTWRTAASALNAIGFDLAGQSHSLGILPMQNLLYLATRYPADFARIYGRRVQYPMAAAAMSITRDLLQMLKISSVDGSSGAHLHAPHITTPPNQNAMGGSATTTAVGGGVSVGALAGKLPPPSAPQWESQLLSLFCHVDHEEAFEETFCAVMDLLDREFVATNAGYRQFAETRLRVLLMLDDFLSRRPLSIEELRTMISTARPRTD* # ORIGINAL: g7100.t1 original gene structure, not modified by PASA NODE_1158_length_13471_cov_55.8082 AUGUSTUS gene 3017 4751 . + . ID=g7100;Name=g7100.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS mRNA 3017 4751 . + . ID=g7100.t1;Parent=g7100;Name=g7100.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 3017 4206 . + . ID=g7100.t1.exon1;Parent=g7100.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 3017 4206 . + 0 ID=cds.g7100.t1;Parent=g7100.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS exon 4391 4751 . + . ID=g7100.t1.exon2;Parent=g7100.t1 NODE_1158_length_13471_cov_55.8082 AUGUSTUS CDS 4391 4751 . + 1 ID=cds.g7100.t1;Parent=g7100.t1 #PROT g7100.t1 g7100 MKSTLPMQAVLASAIVLVSATLVVAGPPSSVVCQSTSPDYDPARIYYDAGNQVHPKYADNFKVAYGTNYKVAQVKMNGNTPDIQYLLVKCGTPVPTSVSATRDNLPFALWANATLIYVPMKGIASLETTFHAMVAAVGAADTVVAVDNTKGVSTPAVIDRVAGGFVTDLCADVGGFCDVNTTAIAASEAQGVLTGTYARDAVLLASGSQLPVGIVINEISERHPLGRSEWLKLVAMLFDREAVANAVFGAIEADYKSASALVADIMRRPRVVAGRPYFGQWVDDGPVGTWYIPGGQSYISRLIQDAGGDYPWANTTATGTIPTKAPVAMSVAGTADVWINTDLDIASLDDARTIDSGFYENMTAVKCGRVFNRDARVRQYGNDVFETGVVMPNLVLRDLIKIFHPTKHLGAFQFYRQVLPSHPSQHILTSLPASCYPLDDISSLDSTANPTVNTDDRDTSSLSKGQIAAIAIGCGVFSMLVVGVAAFAAGKSSGRSGKATKEIQSDIPMQMAISTA* # PASA_UPDATE: g7101.t1, single gene model update, valid-1, status:[pasa:asmbl_595,status:3], valid-1 NODE_1158_length_13471_cov_55.8082 . gene 5600 9429 . + . ID=g7101;Name=g7101.t1 NODE_1158_length_13471_cov_55.8082 . mRNA 5600 9429 . + . ID=g7101.t1;Parent=g7101;Name=g7101.t1 NODE_1158_length_13471_cov_55.8082 . five_prime_UTR 5600 5721 . + . ID=g7101.t1.utr5p1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 5600 6075 . + . ID=g7101.t1.exon1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 5722 6075 . + 0 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 6440 6748 . + . ID=g7101.t1.exon2;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 6440 6748 . + 0 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 6979 7126 . + . ID=g7101.t1.exon3;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 6979 7126 . + 0 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 7373 7467 . + . ID=g7101.t1.exon4;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 7373 7467 . + 2 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 7666 7796 . + . ID=g7101.t1.exon5;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 7666 7796 . + 0 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 8400 8539 . + . ID=g7101.t1.exon6;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 8400 8539 . + 1 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . exon 8771 9429 . + . ID=g7101.t1.exon7;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . CDS 8771 8997 . + 2 ID=cds.g7101.t1;Parent=g7101.t1 NODE_1158_length_13471_cov_55.8082 . three_prime_UTR 8998 9429 . + . ID=g7101.t1.utr3p1;Parent=g7101.t1 #PROT g7101.t1 g7101 MGVIKHICCIGAGYVGGPSCAVIALNCPDIKVTVVDISKERIDAWNSDTLPIYEPGLFEVVQKCRGRNLFFSTEVDEIIKAADLIFVCVNTPTKTFGVGKGRAADLKYIEAAARRIAQVATSPKIVVEKSTVPVHAADSIDSILNANSANGIHFDILSNPEFLAEGTAISDLMKPDRVLIGGHQTPEGFAAVAALSEVYENWVPKSQVITMNLWSSELSKLTANAFLAQRISSINAISAVCEATGADVEEVAHAIGLDKRIGPYFLKASVGFGGSCFQKDILNLVYLCESLHLPEVAEYWKQVINMNDYQRRRFSNRIIRSLFNTVTNKKIGILGFAFKKDTGDTRESSSIYITSYLLEEGARVCVYDPKVTQEQMIADLTEVGINPMDNADVRRLFETVDDPYKALQGAHAAVVCTEWDEFKTLDWERVYATMLKPAFIFDGRMLLNHKRLREIGFQVEVIGKKVY* # ORIGINAL: g2669.t1 original gene structure, not modified by PASA NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS gene 5475 7124 . + . ID=g2669;Name=g2669.t1 NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS mRNA 5475 7124 . + . ID=g2669.t1;Parent=g2669;Name=g2669.t1 NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS exon 5475 5565 . + . ID=g2669.t1.exon1;Parent=g2669.t1 NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS CDS 5475 5565 . + 0 ID=cds.g2669.t1;Parent=g2669.t1 NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS exon 5737 7124 . + . ID=g2669.t1.exon2;Parent=g2669.t1 NODE_1728_length_9500_cov_63.2401_potentialcontaminant AUGUSTUS CDS 5737 7124 . + 2 ID=cds.g2669.t1;Parent=g2669.t1 #PROT g2669.t1 g2669 MVGQCEEPMFSDSPLRNALQLPKTADAESQDNLELKEFLAIRNGSSTCRSILSSLNAAAEHIPMEVDAINTVPLTIESDRGLPTANVVSSADNRTLDDGNVVGLANLGVTCFMNVVFQLILAMPGMSAAIEMEAEGLAASESQSLFICALAKLSSWARSATKERGMVSLSSAQLDEILCGCMQNFTPPTEQEDAEEHLRRLINLIDEHAEKNPNGPLGIFYENNLRGDSFTVLTCGCGLGRHEIQEKLRGSVNLPLNHSTAATTLDALLETALADEELDNWTCRANGCTSTRSAKRTVLLTSRILVFFLGRFQFIRGPNGMQSSKVNTPVLLPQTIALNQALGGGSKAYRLRAVTSHIGSSLHSGHFVAAVERNGKYFLCNDQIIRNITREDMLRGGTKQYSRSPAAPHILLYVLDERASVVGNESADFLHPQKVLRTEGMPHVSAQATGTSVMESQLTTPTTNDDDDDKLHAPSEDPLPKQRQRRAPARFA* # PASA_UPDATE: g12154.t1, single gene model update, valid-1, status:[pasa:asmbl_5883,status:12], valid-1 NODE_3313_length_3761_cov_37.9791 . gene 132 3356 . - . ID=g12154;Name=g12154.t1 NODE_3313_length_3761_cov_37.9791 . mRNA 132 3356 . - . ID=g12154.t1;Parent=g12154;Name=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 2898 3356 . - . ID=g12154.t1.exon1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 2898 3356 . - 0 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 2654 2690 . - . ID=g12154.t1.exon2;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 2654 2690 . - 0 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 2282 2336 . - . ID=g12154.t1.exon3;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 2282 2336 . - 2 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 1092 1954 . - . ID=g12154.t1.exon4;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 1092 1954 . - 1 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 741 823 . - . ID=g12154.t1.exon5;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 741 823 . - 2 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 520 581 . - . ID=g12154.t1.exon6;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 520 581 . - 0 ID=cds.g12154.t1;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . exon 132 180 . - . ID=g12154.t1.exon7;Parent=g12154.t1 NODE_3313_length_3761_cov_37.9791 . CDS 132 180 . - 1 ID=cds.g12154.t1;Parent=g12154.t1;3_prime_partial=true #PROT g12154.t1 g12154 MLILNRCFTHNHHVASRQAAENYIESIPDNLFGGSPGVEYTRMSSRPDLAVDFSGNPGDRSSQCPDGNSAAVTVCVYPTCRTCICVAGLTGTNCTQSCATNGTSPVFASGITLADSYGPRCSGNCSACVHIYACDPTVGCLCLPGWMGTLCDKPTKVDIVPVVLAVTTTTVTLEWDVASCVGCAYRLQRTRAEVITLCEDPFPAVDDACVDRIETGEVFIRPFFQETSRLVDTDLYPDTEYRYRLQVRANDGAVFSSGQYISVRSAVTSEAPSVRVIGVYEVSKGVLRLSWGTVPDTNGYILRHEVFRGNGAKYVGKGGMKYLATVGRDDRFYDDAGLAVGVLYHYAVLAVVDDGTNKGRNGTLPSDARQNITTADGVFEDAALASPAGAPSAPVTSSNSVETTTIAVAVVVSVAIVVACGAAFRWSYVRSRDNKRKEEHENFLQTLLEKRDFESVELDRQGVHLLEEVGSGEFGVVYRARVATSDGRIRICAVKTLKEGSCLESRQEFVDEAKIMRGLNNPHVMSLVGICIRDEP # ORIGINAL: g1667.t1 original gene structure, not modified by PASA NODE_698_length_18882_cov_44.634 AUGUSTUS gene 1868 3537 . + . ID=g1667;Name=g1667.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS mRNA 1868 3537 . + . ID=g1667.t1;Parent=g1667;Name=g1667.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS exon 1868 2386 . + . ID=g1667.t1.exon1;Parent=g1667.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS CDS 1868 2386 . + 0 ID=cds.g1667.t1;Parent=g1667.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS exon 2749 3537 . + . ID=g1667.t1.exon2;Parent=g1667.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS CDS 2749 3537 . + 0 ID=cds.g1667.t1;Parent=g1667.t1 #PROT g1667.t1 g1667 MDQQRAVQRMVAAIERNARRGKSSPTFQSNPVNGVKIIVAPEFCADKTVPRWVLATDPVTFTPSADDDGRVRFWGVEAMSTRRRWSKQRVSAASDRELIGLDYGNYRLPEAQLTAMIAERRLRAIEAASVTPQLKARYGMSYTIRVSMDGITPPVSRTVRVPAAVHLRTFIDKIDDKKVRLADVLESTGQEIAFVYDLGTRWEHTVTLLSAMEEVPNGQRALDVLGGEGACPPEDSNGSEIYCAGMWYQAGTRQSVDATPGDPQFQVFVDCLFFDKSGNDMYAAAVAPGGVLVNKAKQGHSRAHDDIVSNASYYKPPYVQLALLNGRFRPDFFNLDEAQRRVAAHLSTRLSSGAAACCPCCDGVGTEKSIKKLDLCASCEAAATPDVRLKSCSACKAVRYCGGQCQKNHWAVHKAICPQLKVEMEAALASGRGQT* # PASA_UPDATE: g1668.t1, single gene model update, valid-1, status:[pasa:asmbl_8920,status:3], valid-1 NODE_698_length_18882_cov_44.634 . gene 3722 14055 . - . ID=g1668;Name=g1668.t1 NODE_698_length_18882_cov_44.634 . mRNA 3722 14055 . - . ID=g1668.t1;Parent=g1668;Name=g1668.t1 NODE_698_length_18882_cov_44.634 . five_prime_UTR 13992 14055 . - . ID=g1668.t1.utr5p1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 13717 14055 . - . ID=g1668.t1.exon1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 13717 13991 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 13370 13477 . - . ID=g1668.t1.exon2;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 13370 13477 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 13036 13132 . - . ID=g1668.t1.exon3;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 13036 13132 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 12729 12839 . - . ID=g1668.t1.exon4;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 12729 12839 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 12488 12614 . - . ID=g1668.t1.exon5;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 12488 12614 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 11752 12363 . - . ID=g1668.t1.exon6;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 11752 12363 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 11540 11616 . - . ID=g1668.t1.exon7;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 11540 11616 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 11271 11387 . - . ID=g1668.t1.exon8;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 11271 11387 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 10808 11065 . - . ID=g1668.t1.exon9;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 10808 11065 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 10514 10684 . - . ID=g1668.t1.exon10;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 10514 10684 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 10058 10245 . - . ID=g1668.t1.exon11;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 10058 10245 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 9465 9847 . - . ID=g1668.t1.exon12;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 9465 9847 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 9261 9293 . - . ID=g1668.t1.exon13;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 9261 9293 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 9001 9103 . - . ID=g1668.t1.exon14;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 9001 9103 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 8712 8798 . - . ID=g1668.t1.exon15;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 8712 8798 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 8431 8504 . - . ID=g1668.t1.exon16;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 8431 8504 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 8123 8203 . - . ID=g1668.t1.exon17;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 8123 8203 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 7783 7861 . - . ID=g1668.t1.exon18;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 7783 7861 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 7622 7656 . - . ID=g1668.t1.exon19;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 7622 7656 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 7320 7503 . - . ID=g1668.t1.exon20;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 7320 7503 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 6987 7128 . - . ID=g1668.t1.exon21;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 6987 7128 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 6588 6707 . - . ID=g1668.t1.exon22;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 6588 6707 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 6343 6439 . - . ID=g1668.t1.exon23;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 6343 6439 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 6058 6145 . - . ID=g1668.t1.exon24;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 6058 6145 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 5678 5779 . - . ID=g1668.t1.exon25;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 5678 5779 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 5283 5328 . - . ID=g1668.t1.exon26;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 5283 5328 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 4915 5012 . - . ID=g1668.t1.exon27;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 4915 5012 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 4763 4809 . - . ID=g1668.t1.exon28;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 4763 4809 . - 1 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 4539 4637 . - . ID=g1668.t1.exon29;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 4539 4637 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 4310 4404 . - . ID=g1668.t1.exon30;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 4310 4404 . - 2 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 4054 4107 . - . ID=g1668.t1.exon31;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 4054 4107 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . exon 3722 3832 . - . ID=g1668.t1.exon32;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . CDS 3779 3832 . - 0 ID=cds.g1668.t1;Parent=g1668.t1 NODE_698_length_18882_cov_44.634 . three_prime_UTR 3722 3778 . - . ID=g1668.t1.utr3p1;Parent=g1668.t1 #PROT g1668.t1 g1668 MSMSVFRRLTEFPKMTALGRCNQARDDAVALRERTRGRKTHSDNYDARAVSRRTARGLRMSRYCVALAVVVIVGCNVGVALASVAGWEFAWNTLSPTGDTPAARCDSNGFVYNSKLHIFGGYEETHGVYNELSRYDVAASSWDTLNFGGDVPQERLSPYGAVVGSKYIVFGGADANSQYLNDLYYVDLAAATPLWVKVTPTNPADGPTGRTWGASAAYGTKLFVYGGYTGIDQNQAYFLETQTWTWELISYACPGYAGGEYAPPADRTVNSYASTEAVCSGAENINPDAPPLGTIAALMLSNAGAQLVVQDDGTATVNRTADFDTASGLTEWRSINGTLQDFVAKALAALNTGIDILQRANASSDAAVVAAAATEYDTLWMDLYNSVATRSNASAVDLSKLEICGDYYCDKLPCAVPPPVDGPSVVIQNDNAYIVGGWKCGYGNGRGGPDCFVGDVWVLNLVSRTWTKLNTTTATDANDNPQPIAYGSVSIYNNTIFLFGGGYKDAAQDWSYLNTLYTLDLDTLQWSAVAAKGELPLRRWSQIWKGVGSRMYLFGGCKPPNVFYNDIHVLFPVKTSAAKTVASGSALSVADAGVVSVFRVQARDINGADLNFGGDKVSMFSFQKAGFQYFQASSVRDNRNGTYDIFYKNNQAGEFLVTVTFNGADISGSPFSLVISPRDPNPATSSASGTALRTATAGAKASFFVSVIDVYGNKASAAGRLSVSLYGAGGSLASTAISISGSNGDYAVEYLAPAFGSYSIRVRINGTDISGSPFALSVAPAPASSSVSVGVIAGAAGGGGAAFLVIAIVFGLWWNRRNKRLKLEAELANMSWIISYDDLQVGAFATGTGKSAAGLGSRISQRSRSSAGSKGARVWADRQIFTTVGKWKGQMVAIKETKLAELIITREVCMEVVRLLDCRHINVINFIGCVVTPPHVAIVTEYCAKGSLEDILLNERIQLDWVFKYSLASDLAKGMAYIHQTQIDHHGALKSSNCVIDSRWILKITDFGLPSFRNKGHAVAVLPTGEPNPEEESEHAKFARYLWTAPEHLEAATGNRIAGSKKGDVYSFGIIMSELLMREPPYHSSGLEPKTIVGRVPDGLRPILLEEIPAELTKLVQRCWAPAPEERPEFDQIAKDIHRINPEPSDNVIDSVLKMLEKYANNLEGLVEERTQELELEKVKTEELLYRMLPRKVADDLKAGKAIKAESFDAVTIFFSDIVGFTNIAGESTPLQVVDFLNDLYTCFDSIIDSHDVYKVETIGDAYMVVSGLPIRNDNRHAGEIANMALDLLSATTDFKIRHLPDTQLQLRIGLHSGPCVSGVVGLKMPRYCLFGDTVNTASRMESSGFALRVHLSQTTHAFLIGLNKGYHMEERGTITVKGKGSMTTYFLITRDGYTKPLPDLSKAASLSQHHFK* # ORIGINAL: g1666.t1 original gene structure, not modified by PASA NODE_698_length_18882_cov_44.634 AUGUSTUS gene 216 1191 . - . ID=g1666;Name=g1666.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS mRNA 216 1191 . - . ID=g1666.t1;Parent=g1666;Name=g1666.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS exon 460 1191 . - . ID=g1666.t1.exon1;Parent=g1666.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS CDS 460 1191 . - 0 ID=cds.g1666.t1;Parent=g1666.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS exon 216 266 . - . ID=g1666.t1.exon2;Parent=g1666.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS CDS 216 266 . - 0 ID=cds.g1666.t1;Parent=g1666.t1 #PROT g1666.t1 g1666 MADLNYALQSGGSYATDVFDSGTSHARIVMELLALNAREDELETTRRNAYDRSHAHVTSPSLSEVLGRRRHSELQTDADAAAVGVPRATTERNSDKQTAVRRALSGLRAERKMDRKVDRKSEGKEQRGVDAKSPPISVHRHRVSRFRDAHVTEGASQVGNEPATHAMMSAEPRARGNVVTASERCGWTERSCGSWRGLLSLRVLVLGAVLVMIAVFSGILLGVLSAEFLRQFDALEDTDAVSNTKRVMRLFGEDMNAILMA # PASA_UPDATE: g1670.t1, single gene model update, valid-1, status:[pasa:asmbl_8921,status:12], valid-1 NODE_698_length_18882_cov_44.634 . gene 16621 18697 . - . ID=g1670;Name=g1670.t1 NODE_698_length_18882_cov_44.634 . mRNA 16621 18697 . - . ID=g1670.t1;Parent=g1670;Name=g1670.t1 NODE_698_length_18882_cov_44.634 . exon 18532 18697 . - . ID=g1670.t1.exon1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . CDS 18532 18697 . - 0 ID=cds.g1670.t1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . exon 18150 18265 . - . ID=g1670.t1.exon2;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . CDS 18150 18265 . - 2 ID=cds.g1670.t1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . exon 17608 17818 . - . ID=g1670.t1.exon3;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . CDS 17608 17818 . - 0 ID=cds.g1670.t1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . exon 17157 17278 . - . ID=g1670.t1.exon4;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . CDS 17157 17278 . - 2 ID=cds.g1670.t1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . exon 16621 16931 . - . ID=g1670.t1.exon5;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . CDS 16731 16931 . - 0 ID=cds.g1670.t1;Parent=g1670.t1 NODE_698_length_18882_cov_44.634 . three_prime_UTR 16621 16730 . - . ID=g1670.t1.utr3p1;Parent=g1670.t1 #PROT g1670.t1 g1670 MFLGLQLWEVYNKRRCVRTYHGHTKAVRDVCFNNDGTRFLSCGYDKYIRLWDTESGECVKRFTNNKVAYCVKFNPDPDKQHMFVVGCQDKKVVQWDINTGEIVQEYDRHLGAVNTITFIDGNRKFLTTSDDKTIRVWEWEIPVDVKYIADPSMHSMPAVGVHPSGKYLALQSLENKIYVLTAGDRVRMNNKKKFTGHLTSGYACEVNFSPDGSYLISGDADGLLRIWDWKSCKLYSTVKAHDGVCIGVLWHPHETSKVITCGWDGLIKLWD* # ORIGINAL: g1669.t1 original gene structure, not modified by PASA NODE_698_length_18882_cov_44.634 AUGUSTUS gene 14690 16051 . + . ID=g1669;Name=g1669.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS mRNA 14690 16051 . + . ID=g1669.t1;Parent=g1669;Name=g1669.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS exon 14690 16051 . + . ID=g1669.t1.exon1;Parent=g1669.t1 NODE_698_length_18882_cov_44.634 AUGUSTUS CDS 14690 16051 . + 0 ID=cds.g1669.t1;Parent=g1669.t1 #PROT g1669.t1 g1669 MKANPRHGQRRPSRVEQAAPAGTSHCAGLTALVVAVVVVVAAWLAHGHGLFSIGGKEESISPEEALTAWMVRNGATAGGLRIANIGDRRGIVATRPIKKGEELFKVPARLILKSTRVCKTLLFIDERVCVLDGRIILALFLVVEQTRPGGFWRPYVRALPRAYDSHSIWVTEDDLSVLDGTAVRENAVDVVGEEKMRLQELKDIVRESGGRASFATLAPGLLDDATLEWAYVSVTSRCFASSPNAFDLVPFVDMMNSHPTAGPLVGLDNMAPHATTTATGDYAEGEEVFLLYHEREASIVNIALNYGYVERSHIFRFGADFNRNSDDPLLAEKRAAARAVGCEDFYILSLTGMEAQIERLLSCARIACGQLIETAEYTESEDTEFFECAFARVKRVIERGLITHTTPRDGMDTSETAGSNDSGSQSHLRRVLSELRQWEADAMRSALAALEAY* # PASA_UPDATE: g5134.t1, single gene model update, valid-1, status:[pasa:asmbl_5636,status:12], valid-1 NODE_3150_length_4187_cov_42.4565 . gene 1361 4034 . - . ID=g5134;Name=g5134.t1 NODE_3150_length_4187_cov_42.4565 . mRNA 1361 4034 . - . ID=g5134.t1;Parent=g5134;Name=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 3715 4034 . - . ID=g5134.t1.exon1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 3715 4034 . - 0 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 3445 3484 . - . ID=g5134.t1.exon2;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 3445 3484 . - 1 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 2982 3080 . - . ID=g5134.t1.exon3;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 2982 3080 . - 0 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 2684 2764 . - . ID=g5134.t1.exon4;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 2684 2764 . - 0 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 2420 2595 . - . ID=g5134.t1.exon5;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 2420 2595 . - 0 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 1956 2105 . - . ID=g5134.t1.exon6;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 1956 2105 . - 1 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . exon 1361 1737 . - . ID=g5134.t1.exon7;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . CDS 1575 1737 . - 1 ID=cds.g5134.t1;Parent=g5134.t1 NODE_3150_length_4187_cov_42.4565 . three_prime_UTR 1361 1574 . - . ID=g5134.t1.utr3p1;Parent=g5134.t1 #PROT g5134.t1 g5134 MRELLDFGRNMTRRRLVQSAQYLQQWLPVRLAHRIRDFQRLPFIVGCNPHIHSVYQLYINSLDRLRSFPPVADPDSEREFTAMLKKLVDEHTGVVNTLAVGCREIKRYIPQDRLNKFLDHTLQSRVGIRVLAEQHLALHQQREGFIGMICTKLSPALLLSKVIDIVTVICEMHYRGSAPKVVINGHVDATFPYIPAHCEYMLIELLKNAMRATVEFNRGKPLPNVNVTIVKGVTDMTLRISDQGGGIAPENMANIWDYSFTTLASGGPSVDEDEDGGVLSGLTQGDINRFGPIAGLGFGLPMTRVYAKYFGGSLDLYTMHGYGTDVYLKLNHIGDKTEHLEI* # ORIGINAL: g12336.t1 original gene structure, not modified by PASA NODE_3760_length_2812_cov_24.3957 AUGUSTUS gene 749 2740 . - . ID=g12336;Name=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS mRNA 749 2740 . - . ID=g12336.t1;Parent=g12336;Name=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS exon 2387 2740 . - . ID=g12336.t1.exon1;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS CDS 2387 2740 . - 0 ID=cds.g12336.t1;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS exon 1856 1999 . - . ID=g12336.t1.exon2;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS CDS 1856 1999 . - 0 ID=cds.g12336.t1;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS exon 1087 1575 . - . ID=g12336.t1.exon3;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS CDS 1087 1575 . - 0 ID=cds.g12336.t1;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS exon 749 913 . - . ID=g12336.t1.exon4;Parent=g12336.t1 NODE_3760_length_2812_cov_24.3957 AUGUSTUS CDS 749 913 . - 0 ID=cds.g12336.t1;Parent=g12336.t1 #PROT g12336.t1 g12336 MCLCLRVSRARLLQGEVRTFISIQADGEGGGDGEAYDPFAYEPDDNDFGTVSNRSSVASAPAPHAASVFSHGGGGGGNAPPPPPPPGPPPPSAAGGPKQFRALYQYDAVQGDQMSFAEGEIITALGEEDDGWVYGQCKSNGAKGWYPATYVELIPAAPAPAPAPPPQQQRQSMPPTPAGAPAPMALPGFGTMKPKTASMAAAPPSFQPPPPSMPMPSAGSGGPPPTPPKVAPGGGGGFPSGPRPGSVSQPPPPPGAPPGGASRPGSVAQAPPSGGMPRPPPGGGASKPTPTPPPPAGKPSAGPSYSTGTVKKPPSGPPMPPGPPPPPAKGGGPPPPPGPPPPSAAPAGGKGRGALLDSIQGGAKLKKTVTNDRSASSLAGKIV* # PASA_UPDATE: g6324.t1, single gene model update, valid-1, status:[pasa:asmbl_116,status:12], valid-1 NODE_1031_length_14537_cov_50.2106 . gene 85 3054 . - . ID=g6324;Name=g6324.t1 NODE_1031_length_14537_cov_50.2106 . mRNA 85 3054 . - . ID=g6324.t1;Parent=g6324;Name=g6324.t1 NODE_1031_length_14537_cov_50.2106 . five_prime_UTR 3029 3054 . - . ID=g6324.t1.utr5p1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 2225 3054 . - . ID=g6324.t1.exon1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 2225 3028 . - 0 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 2001 2075 . - . ID=g6324.t1.exon2;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 2001 2075 . - 0 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 1658 1871 . - . ID=g6324.t1.exon3;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 1658 1871 . - 0 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 1358 1498 . - . ID=g6324.t1.exon4;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 1358 1498 . - 2 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 1158 1250 . - . ID=g6324.t1.exon5;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 1158 1250 . - 2 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 948 1031 . - . ID=g6324.t1.exon6;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 948 1031 . - 2 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 442 682 . - . ID=g6324.t1.exon7;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 442 682 . - 2 ID=cds.g6324.t1;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . exon 85 286 . - . ID=g6324.t1.exon8;Parent=g6324.t1 NODE_1031_length_14537_cov_50.2106 . CDS 85 286 . - 1 ID=cds.g6324.t1;Parent=g6324.t1;3_prime_partial=true #PROT g6324.t1 g6324 MGDSVGLSPVGSDANKIPSGDHTVSATKPLTRRDLWRHKYITTKVESVEIGSYSAHLNWKEELSCIADKNSQHQGCVYSYTIRSGAISLRMAGRISINILAFASVVLIALATFSSAGMASPAVCNDTVHSLRNATDEWKLCLASAAVNVSGICGDVSPSDLCVCTTCQPAYDAMIQKYVSVRSNSECYQSNGQDATFVTVFRNVIDLIRAWPCFVQRTNCSDPASAPFCNEPTLFANTLPAAGKRTVTVCLHALQTSCKRAPNQPFCKCTNGICSTASVNTTVSPTRDVSLYDVMCAPTSPFAATMNGNPYTASLTNRTYGDSVQLLPGQSEWSSLPAIWSQEGCDDKGKPFVRHLGALDNCGPGYHCPIVEGHVRTVAICPAGYYCPQPYDDPIPCPKGYFCPAAMTHPIKCAALDVCPAKAKVHVPFAGLIATFIIVFAMVVCYKLFRRAELRRWAVDAAEDEQELQSAPAVDGKRTGVAPKAILKNSEMTLDIEFDSLGVDLPAPRKWSRLYMRDKGAVGKTIMQGISGGFKSGRVSAIMGPSGAGKTTLVSCLLGTVRKSSGTVCVNGKEDTLSRYRRIIGFVPQDNIMHPTLTVAEVIRTSARLRLPSSWTSE # ORIGINAL: g6325.t1 original gene structure, not modified by PASA NODE_1031_length_14537_cov_50.2106 AUGUSTUS gene 3736 8151 . + . ID=g6325;Name=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS mRNA 3736 8151 . + . ID=g6325.t1;Parent=g6325;Name=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 3736 3985 . + . ID=g6325.t1.exon1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 3736 3985 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 4110 4226 . + . ID=g6325.t1.exon2;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 4110 4226 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 4392 4637 . + . ID=g6325.t1.exon3;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 4392 4637 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 4740 4894 . + . ID=g6325.t1.exon4;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 4740 4894 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 5056 5094 . + . ID=g6325.t1.exon5;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 5056 5094 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 5214 5327 . + . ID=g6325.t1.exon6;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 5214 5327 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 5495 5536 . + . ID=g6325.t1.exon7;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 5495 5536 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 5656 5866 . + . ID=g6325.t1.exon8;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 5656 5866 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 6008 6785 . + . ID=g6325.t1.exon9;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 6008 6785 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 6944 7071 . + . ID=g6325.t1.exon10;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 6944 7071 . + 1 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 7257 7291 . + . ID=g6325.t1.exon11;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 7257 7291 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 7419 7647 . + . ID=g6325.t1.exon12;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 7419 7647 . + 0 ID=cds.g6325.t1;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 7898 8151 . + . ID=g6325.t1.exon13;Parent=g6325.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 7898 8151 . + 2 ID=cds.g6325.t1;Parent=g6325.t1 #PROT g6325.t1 g6325 MATWPLFVTLLCILGAASPSLGTSNCTTVTLQNYWWNGLATSPGAGSVCHPTINPLNEVCQFCQAVQIPLCVCPKGFYCPAGDDYPNCLRCPSGHYCPYQGDFDPLPCKAGQFCPEGSITPHECYAMDICDAKSSRYVFLAGIFGDVVVVILLAFLLFVFGTGASDRAARTFFRKIGVLVRPEGGIDKKPESADASIIVDPEAPRAKDDTLEGMVPIDLRFENLGYTLRQTTGVFKKTTTEKVLLSGVTGELLHGKVSGVFGPSGAGKTTFLNVLCGKLQRTSGSLYINGEADEIFNYRKVIGFVPQDDVMLRSLTVEEILVHSARTRLPRTETSQQMSTRIDSVLRTLGLSDIRHERIGDERIRGISGGQRKRVNIGMELVAGPALLFLDEPTSGLDSTSSEECMSAMRAIAAGGINVVAVIHQPRMSIFSSIDTMLLLGRGGRTVYNGPAESAHLYFMGLGFKMLDNVSPPDFCLDVVSGAVARAGRPDFTPSELFEDWEKSVAAGGTGDGVGTMEVSVDDNANEDIPSNGAAGATTNRGSLMKRKSLLRLRKFLAKDRARVTASWPVQVLLFLLRAMVQLKHDTKRFLLDAVMFAFTGLYLGLSLIDPKFVSPVPSEVRSTCPTAMLQIVENMNLADKNLKGITDFCSVCFPLVDLAGQMGFYIAMGVGIISAAVAVGTFGDDLVVYWRDASTGIHSSAYFVGKSIADCIKIVVHTSFFLSMFYILAAPLASYGKMFGLMYFLIYCVYGVGYIGSVFLSRETSGFVSVIIAIIWSLCTGVVFDTKAMGPFAYISYPKWFGESVFDIESAPVAYSGLSTYADTRYGYKLGNYGTSIGAMFIIGLVLRAIAFAGLRLRNRDKQR* # ORIGINAL: g6326.t1 original gene structure, not modified by PASA NODE_1031_length_14537_cov_50.2106 AUGUSTUS gene 8596 10232 . + . ID=g6326;Name=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS mRNA 8596 10232 . + . ID=g6326.t1;Parent=g6326;Name=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 8596 8763 . + . ID=g6326.t1.exon1;Parent=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 8596 8763 . + 0 ID=cds.g6326.t1;Parent=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 8952 9146 . + . ID=g6326.t1.exon2;Parent=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 8952 9146 . + 0 ID=cds.g6326.t1;Parent=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS exon 9537 10232 . + . ID=g6326.t1.exon3;Parent=g6326.t1 NODE_1031_length_14537_cov_50.2106 AUGUSTUS CDS 9537 10232 . + 0 ID=cds.g6326.t1;Parent=g6326.t1 #PROT g6326.t1 g6326 MPKQEGNPRSGTTAWRAVIIIAVVAAVAHVQMQRPGAQTSWHANVIDVLFHGCGKLDAIAGYFGARPFAILRGMMHLTDLAVLSRVPFEDTLAVVPGHPYDVPVRVYPAQTRDVGVTTPALIYFHGGGWSSGSPNSHHVLTSYFAEHTGFTVVSVDYRLAPEHKFPVPLDDCVQATSWVFANAAALGIDTTRIAVGGDSAGGNLAAAVTLCTRDDRSLIGGGRIWKQVLLYSAMEPNMFTESMIRNKDAVVLTRAAVVDFVSSYVRPEDISNPLFAPGLSKDLSDLPRAFSLLAEHDPLLDSGRLYAKRLEESGVYSELIVAPLYHAFLHSLELCNDAKKYADDIVRFLVED* # PASA_UPDATE: g6327.t1, single gene model update, valid-1, status:[pasa:asmbl_117,status:3], valid-1 NODE_1031_length_14537_cov_50.2106 . gene 10429 11534 . - . ID=g6327;Name=g6327.t1 NODE_1031_length_14537_cov_50.2106 . mRNA 10429 11534 . - . ID=g6327.t1;Parent=g6327;Name=g6327.t1 NODE_1031_length_14537_cov_50.2106 . five_prime_UTR 11510 11534 . - . ID=g6327.t1.utr5p1;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . exon 11426 11534 . - . ID=g6327.t1.exon1;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . CDS 11426 11509 . - 0 ID=cds.g6327.t1;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . exon 10900 11274 . - . ID=g6327.t1.exon2;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . CDS 10900 11274 . - 0 ID=cds.g6327.t1;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . exon 10429 10704 . - . ID=g6327.t1.exon3;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . CDS 10450 10704 . - 0 ID=cds.g6327.t1;Parent=g6327.t1 NODE_1031_length_14537_cov_50.2106 . three_prime_UTR 10429 10449 . - . ID=g6327.t1.utr3p1;Parent=g6327.t1 #PROT g6327.t1 g6327 MLPGSRSALRMFTGIVRGLCPVHEVVDKEGGRRLRIRLPRELATNLETGASVAINGTCLTVVSFAATKDDSGVAVDFDVMQESLNRTNLGLLITCADGDLPSQINHVNVERSMRFGDEVGGHHVSGHVDCVGTISELVIFPNNREVVFKFDEEWSKFLVPKGWIAVDGISLTVVRVGADFFSVCLIPETLARTTLGIKGVGDAVNLEFDSVTKITVITMERHLPRMLDEYMARKQSQ* # PASA_UPDATE: g6328.t1, single gene model update, valid-1, status:[pasa:asmbl_118,status:3], valid-1 NODE_1031_length_14537_cov_50.2106 . gene 11729 13236 . - . ID=g6328;Name=g6328.t1 NODE_1031_length_14537_cov_50.2106 . mRNA 11729 13236 . - . ID=g6328.t1;Parent=g6328;Name=g6328.t1 NODE_1031_length_14537_cov_50.2106 . five_prime_UTR 13094 13236 . - . ID=g6328.t1.utr5p1;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . exon 12893 13236 . - . ID=g6328.t1.exon1;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . CDS 12893 13093 . - 0 ID=cds.g6328.t1;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . exon 12447 12591 . - . ID=g6328.t1.exon2;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . CDS 12447 12591 . - 0 ID=cds.g6328.t1;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . exon 11729 12072 . - . ID=g6328.t1.exon3;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . CDS 11822 12072 . - 2 ID=cds.g6328.t1;Parent=g6328.t1 NODE_1031_length_14537_cov_50.2106 . three_prime_UTR 11729 11821 . - . ID=g6328.t1.utr3p1;Parent=g6328.t1 #PROT g6328.t1 g6328 MATPNLERLLFTATALYDFGGDESRTDVLSFSCGENFEIWDNSGEHYWYAKIPSSGAYGYVPASYLKVNSVDGEDTGPRPKRVSLPEMGGVLLLPLPASNFKMSKSLQNLDEYTTESQGQGGENGAEIIVKKTDVRRAPSITESTLRINKMHMQTKAEENNTWQRELERKKLEKEKAAGTPAASSELQDKLAKFAKKT* # ORIGINAL: g516.t1 original gene structure, not modified by PASA NODE_792_length_17629_cov_42.7087 AUGUSTUS gene 10726 14079 . - . ID=g516;Name=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS mRNA 10726 14079 . - . ID=g516.t1;Parent=g516;Name=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 13918 14079 . - . ID=g516.t1.exon1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 13918 14079 . - 0 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 13557 13719 . - . ID=g516.t1.exon2;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 13557 13719 . - 0 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 12803 13371 . - . ID=g516.t1.exon3;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 12803 13371 . - 2 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 12269 12540 . - . ID=g516.t1.exon4;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 12269 12540 . - 0 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 11553 11931 . - . ID=g516.t1.exon5;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 11553 11931 . - 1 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 11004 11304 . - . ID=g516.t1.exon6;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 11004 11304 . - 0 ID=cds.g516.t1;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 10726 10820 . - . ID=g516.t1.exon7;Parent=g516.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 10726 10820 . - 2 ID=cds.g516.t1;Parent=g516.t1 #PROT g516.t1 g516 MEPDERRTVPQLQSRAGRVASQEQKRNTKAADPSGNASMSIATAIVAGFILLLVDESADRSLKPFFGSCANNASTLWRAIVAVVAIARCFGFVPRIFQLSQTTTLSIAGVLLSAELYFANQIVLRYIADDANPNVASLIASAVLFAPATALLTTVASGPIVGHFSSSLSASPAYAYSSALMLAGTAYACQRALFISLAHFGVVFPHCWVILSSGITLSLLAVVKQISTRRRNRAHPIDVHPKTASPTGSQGDSGGVRAAEPAQSHVIGICLGALLLVLSISLAVMSWNACPSCRMVSPNTPPETIAGKRFTVLARMESTTGLVSVVEDNLLKMRVMRCGRSILGGVHKGEGIVGESVFSAFHIQEAVRLVRTDCDDSAEGRRPKRSLHIGLGVGTAAAAFVKLGLDVDVVEIDGAIADMAQRYFEFPLRYQTPPSSKISAIDVSKAKRAPSARVFVDDAVHWVAAAASHAACVDGGCYDYVVHDVFTGGSLPSPLFTDGFFGAIARLMRPCGVIASGLVPAGVVYRTLRRSFNTVDVLADENANATVANIVFIATNANANANANVRTAMPIRYRKGTAADFVDSILREEVLADIDRLRPWPPNELPFSLVGPIATDTDNPLNSMDVSVNHWKVMAEIMPQSFWLDT* # PASA_UPDATE: g515.t1, single gene model update, valid-1, status:[pasa:asmbl_9405,status:3], valid-1 # PASA_UPDATE: g515.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9406,status:3], valid-1 NODE_792_length_17629_cov_42.7087 . gene 6352 10097 . - . ID=g515;Name=g515.t1 NODE_792_length_17629_cov_42.7087 . mRNA 6352 10097 . - . ID=g515.t1;Parent=g515;Name=g515.t1 NODE_792_length_17629_cov_42.7087 . five_prime_UTR 9946 10097 . - . ID=g515.t1.utr5p1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 9896 10097 . - . ID=g515.t1.exon1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 9896 9945 . - 0 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 9536 9694 . - . ID=g515.t1.exon2;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 9536 9694 . - 1 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 9188 9285 . - . ID=g515.t1.exon3;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 9188 9285 . - 1 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 8845 8942 . - . ID=g515.t1.exon4;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 8845 8942 . - 2 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 8467 8547 . - . ID=g515.t1.exon5;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 8467 8547 . - 0 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 7996 8215 . - . ID=g515.t1.exon6;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 7996 8215 . - 0 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 7548 7670 . - . ID=g515.t1.exon7;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 7548 7670 . - 2 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 7254 7367 . - . ID=g515.t1.exon8;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 7254 7367 . - 2 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 6999 7113 . - . ID=g515.t1.exon9;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 6999 7113 . - 2 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . exon 6352 6750 . - . ID=g515.t1.exon10;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . CDS 6534 6750 . - 1 ID=cds.g515.t1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . three_prime_UTR 6352 6533 . - . ID=g515.t1.utr3p1;Parent=g515.t1 NODE_792_length_17629_cov_42.7087 . mRNA 6352 10097 . - . ID=g515.t1.1.5b6be70c;Parent=g515;Name=g515.t1 NODE_792_length_17629_cov_42.7087 . five_prime_UTR 9896 10097 . - . ID=g515.t1.1.5b6be70c.utr5p1;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . five_prime_UTR 9536 9694 . - . ID=g515.t1.1.5b6be70c.utr5p2;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . five_prime_UTR 9139 9285 . - . ID=g515.t1.1.5b6be70c.utr5p3;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 9896 10097 . - . ID=g515.t1.1.5b6be70c.exon1;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 9536 9694 . - . ID=g515.t1.1.5b6be70c.exon2;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 8845 9285 . - . ID=g515.t1.1.5b6be70c.exon3;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 8845 9138 . - 0 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 8467 8547 . - . ID=g515.t1.1.5b6be70c.exon4;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 8467 8547 . - 0 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 7996 8215 . - . ID=g515.t1.1.5b6be70c.exon5;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 7996 8215 . - 0 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 7548 7670 . - . ID=g515.t1.1.5b6be70c.exon6;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 7548 7670 . - 2 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 7254 7367 . - . ID=g515.t1.1.5b6be70c.exon7;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 7254 7367 . - 2 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 6999 7113 . - . ID=g515.t1.1.5b6be70c.exon8;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 6999 7113 . - 2 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . exon 6352 6750 . - . ID=g515.t1.1.5b6be70c.exon9;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . CDS 6534 6750 . - 1 ID=cds.g515.t1.1.5b6be70c;Parent=g515.t1.1.5b6be70c NODE_792_length_17629_cov_42.7087 . three_prime_UTR 6352 6533 . - . ID=g515.t1.1.5b6be70c.utr3p1;Parent=g515.t1.1.5b6be70c #PROT g515.t1 g515 MAAIQEGLEPVNAVMCGTGEYTTGYVHGTQSSSDKKIGVVALTLFELRRLGKVRDLGLVGTTGVKFDGIRNHFETKISNVYNGLNVAVSTFPEDSVQRDVFAYRRALDTLKPGDVTTIFTPDDTHYEIAKYAIEKGIHVLLTKPPVKTLREHNELVQLAHAKGVFVMVEYHKRFDPIYSDARARIRTLGDFGYFNSYMSQPKSQLKTFSAWAGAASDISYYLNSHHIDIHAWAMQDLADPVSVVAMGANGVADGSEFNCPKGTEDTITLLVQWKNRASGNLGTAVYTASWASPPSDVHSQQRFHYMGHKGEVTADQARRGYNIATDANGYQSINPLYMAYFPGPDGNFAGHHGYGYRSLENFVDACRMLNAKKVSLADLDRYLPTLRTTAVTTAILEAGRRSLDSEGSRIGISTSRDGIVALDI* #PROT g515.t1.1.5b6be70c g515 MSNRQPLFKCTSLKRNMHMCVYVADALILDEAYVCICMFKYANVCACVCVCICAYLCVCVCVVPADRRALDTLKPGDVTTIFTPDDTHYEIAKYAIEKGIHVLLTKPPVKTLREHNELVQLAHAKGVFVMVEYHKRFDPIYSDARARIRTLGDFGYFNSYMSQPKSQLKTFSAWAGAASDISYYLNSHHIDIHAWAMQDLADPVSVVAMGANGVADGSEFNCPKGTEDTITLLVQWKNRASGNLGTAVYTASWASPPSDVHSQQRFHYMGHKGEVTADQARRGYNIATDANGYQSINPLYMAYFPGPDGNFAGHHGYGYRSLENFVDACRMLNAKKVSLADLDRYLPTLRTTAVTTAILEAGRRSLDSEGSRIGISTSRDGIVALDI* # ORIGINAL: g514.t1 original gene structure, not modified by PASA NODE_792_length_17629_cov_42.7087 AUGUSTUS gene 3800 4852 . + . ID=g514;Name=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS mRNA 3800 4852 . + . ID=g514.t1;Parent=g514;Name=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 3800 3890 . + . ID=g514.t1.exon1;Parent=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 3800 3890 . + 0 ID=cds.g514.t1;Parent=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 4150 4229 . + . ID=g514.t1.exon2;Parent=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 4150 4229 . + 2 ID=cds.g514.t1;Parent=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 4634 4852 . + . ID=g514.t1.exon3;Parent=g514.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 4634 4852 . + 0 ID=cds.g514.t1;Parent=g514.t1 #PROT g514.t1 g514 MQQMVFLAALLVYLERETMIVEDDLVQLFGVSLDDKQPFHIVLEEFLIGLCNLSGELTRVAMNAVTAGDYGRPVRIAKYMGDFHAGFRLLNLKNDALRKRYDGLKYDMKRLEEIVYDLKIRNLLPLESA* # ORIGINAL: g513.t1 original gene structure, not modified by PASA NODE_792_length_17629_cov_42.7087 AUGUSTUS gene 117 2235 . - . ID=g513;Name=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS mRNA 117 2235 . - . ID=g513.t1;Parent=g513;Name=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 2073 2235 . - . ID=g513.t1.exon1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 2073 2235 . - 0 ID=cds.g513.t1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 1786 1889 . - . ID=g513.t1.exon2;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 1786 1889 . - 2 ID=cds.g513.t1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 1472 1533 . - . ID=g513.t1.exon3;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 1472 1533 . - 0 ID=cds.g513.t1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 1054 1183 . - . ID=g513.t1.exon4;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 1054 1183 . - 1 ID=cds.g513.t1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 507 719 . - . ID=g513.t1.exon5;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 507 719 . - 0 ID=cds.g513.t1;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 117 263 . - . ID=g513.t1.exon6;Parent=g513.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 117 263 . - 0 ID=cds.g513.t1;Parent=g513.t1 #PROT g513.t1 g513 MFARAVFRTSGLLTRQLSTRAARPSVSLMATVARTRPALPVAARLPAIAQYSTKSKDLASILDAEVKYETENHNRSDNLANFLATSEFKITEDKVGSDTVKLTKKHNNETIEIVVHVDVDQDRPEFDEEEEDSNDESEINTNQFGFLVRVTKNTFALFGFVRIAELYAMRDFITAQDKTVEFTVFSSGEDEEPFMIGGVQHAAPGVPKDNESVYPGPIVEELDEKLQASLHNYLKERGITTELIETLQELHDDKEQREYMNWLSELSKFVKA* # ORIGINAL: g517.t1 original gene structure, not modified by PASA NODE_792_length_17629_cov_42.7087 AUGUSTUS gene 15569 16505 . - . ID=g517;Name=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS mRNA 15569 16505 . - . ID=g517.t1;Parent=g517;Name=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 16424 16505 . - . ID=g517.t1.exon1;Parent=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 16424 16505 . - 0 ID=cds.g517.t1;Parent=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 16093 16188 . - . ID=g517.t1.exon2;Parent=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 16093 16188 . - 2 ID=cds.g517.t1;Parent=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS exon 15569 15699 . - . ID=g517.t1.exon3;Parent=g517.t1 NODE_792_length_17629_cov_42.7087 AUGUSTUS CDS 15569 15699 . - 2 ID=cds.g517.t1;Parent=g517.t1 #PROT g517.t1 g517 MSAADVFEALEELELGWMRQPLQDALEAYRALQQGKKSAKAEQHKQKPKKKSAEDGDDANDEDGKVVDDSRGGDDEDEDEEETEAGGKSADATVGGSEMDLS* # ORIGINAL: g10421.t1 original gene structure, not modified by PASA NODE_1023_length_14588_cov_37.5789 AUGUSTUS gene 2545 5295 . + . ID=g10421;Name=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS mRNA 2545 5295 . + . ID=g10421.t1;Parent=g10421;Name=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 2545 2610 . + . ID=g10421.t1.exon1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 2545 2610 . + 0 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 2894 2974 . + . ID=g10421.t1.exon2;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 2894 2974 . + 0 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 3256 3352 . + . ID=g10421.t1.exon3;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 3256 3352 . + 0 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 3767 3873 . + . ID=g10421.t1.exon4;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 3767 3873 . + 2 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 3986 4206 . + . ID=g10421.t1.exon5;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 3986 4206 . + 0 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 4463 4917 . + . ID=g10421.t1.exon6;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 4463 4917 . + 1 ID=cds.g10421.t1;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 5141 5295 . + . ID=g10421.t1.exon7;Parent=g10421.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 5141 5295 . + 2 ID=cds.g10421.t1;Parent=g10421.t1 #PROT g10421.t1 g10421 MGAQQSVEASTIEGSEGYHVLKVQDGSPGDKSGLEPFFDFIIAANGTRLDKEDSQLVNILTSNKEKAITLTVYSSKSMSVRELQLVPSDMWGGSGLLGVSIRFCSFEGANENVWHVLEVHPNSPAAAAGLRSNTDYIIGSADSQLHEANDFYALVSEHDKKPLKLYVYNSESNKVREVTIMPNRDWGGGGSLGCGIGYGYLHRIPTRKPSAPAGTSPVDAHNNNNNHGHSHEGGHAHAHGSNPAQDAHHGHSHADGSHHGHAHGGSDMHDDHGAHGHSHSHEEDFVHVPLVSPQGAALVSPMSAVSAVSQPIFMATSPGVADGFQDVALGVPGNSPPATPSVGSLVDSLPITIAQLSIVDSPFAPLTSSAPSSSSTDSAPAPIATVTIVPTEG* # ORIGINAL: g10420.t1 original gene structure, not modified by PASA NODE_1023_length_14588_cov_37.5789 AUGUSTUS gene 188 1377 . - . ID=g10420;Name=g10420.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS mRNA 188 1377 . - . ID=g10420.t1;Parent=g10420;Name=g10420.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 188 1377 . - . ID=g10420.t1.exon1;Parent=g10420.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 188 1377 . - 0 ID=cds.g10420.t1;Parent=g10420.t1 #PROT g10420.t1 g10420 MGDSLTAKRADALLAALDSDGDDDAKATGEKRPAADVGQSKGKQSGPKKAAPAAADKHARPDRTMTKAPEKKADAIPPLDKTVTKDKRDDKDEKRPLKNDEKKKEEPKVEPSEKKSNPPLDRTTTKAKGDKSDEPSLGKSASKDADTKKKDDVASGTVTHTKQREVMPDRTVTKDPAITPSAAVKPREKEDVAPDRTVTWGEKRPSTAPERNRTPSTAGDSRAPLKSTHTSDTLSRADQTVTKAAPAAVTVIHHPEKKGLHQDGVRASRAPAETTVLKGRKDTVNDTRDARDATATTPARTTWERDYESAASPAPTPPQTVKHMVKQAPYDPANYQAEKDGSQKSTLGRSHVPPSRDADRTEALNVVRASSAASTASIDSRSLLGLKPGMRGEPRK # ORIGINAL: g10422.t1 original gene structure, not modified by PASA NODE_1023_length_14588_cov_37.5789 AUGUSTUS gene 6476 13354 . + . ID=g10422;Name=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS mRNA 6476 13354 . + . ID=g10422.t1;Parent=g10422;Name=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 6476 6614 . + . ID=g10422.t1.exon1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 6476 6614 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 6736 6846 . + . ID=g10422.t1.exon2;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 6736 6846 . + 2 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 7249 7363 . + . ID=g10422.t1.exon3;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 7249 7363 . + 2 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 7886 7963 . + . ID=g10422.t1.exon4;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 7886 7963 . + 1 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 8134 8257 . + . ID=g10422.t1.exon5;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 8134 8257 . + 1 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 8629 8804 . + . ID=g10422.t1.exon6;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 8629 8804 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 8992 9039 . + . ID=g10422.t1.exon7;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 8992 9039 . + 1 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 9228 9328 . + . ID=g10422.t1.exon8;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 9228 9328 . + 1 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 9633 9665 . + . ID=g10422.t1.exon9;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 9633 9665 . + 2 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 9926 10077 . + . ID=g10422.t1.exon10;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 9926 10077 . + 2 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 10438 10554 . + . ID=g10422.t1.exon11;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 10438 10554 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 10717 10935 . + . ID=g10422.t1.exon12;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 10717 10935 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 11219 11489 . + . ID=g10422.t1.exon13;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 11219 11489 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 11635 12209 . + . ID=g10422.t1.exon14;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 11635 12209 . + 2 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 12547 12627 . + . ID=g10422.t1.exon15;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 12547 12627 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS exon 12908 13354 . + . ID=g10422.t1.exon16;Parent=g10422.t1 NODE_1023_length_14588_cov_37.5789 AUGUSTUS CDS 12908 13354 . + 0 ID=cds.g10422.t1;Parent=g10422.t1 #PROT g10422.t1 g10422 MTDTPMEDAPPAVASEKKDFDVFKFYFPGDDTKIKPVLSLTPIYSEADMPRKFVRIEANLPVNKCKPAKERKHEFACQCRYRLGDPPSRACGQSCINRGMLIECRPRDCPCGDHCTNQRFARKAYPRLAIFKTEKKGWGLITLEALPRDSFVIEYVGELVYKKDFKARAKEYTRRKNPHFYFMSYAQGKIIDATEKGSISRFINHSCEPNCATQKWISEGTTKIGIFTIKAIPAGTELTFDYKFERYGMSTAVNAVSDVHANTFDEAQPCYCGAPSCSGTIGGNNKQVAIVEDEDDGGSESSDDDEAEVGPEDAATVTENILKEGRLKSAGDVTALFRYARALPDEQGDAKENVTRIILATEDAAVLQKLNSLGFLRLARMWLNDCKDTQTSSSFLLSLLHALAHLPLPTRKQLESSDIRPLVDGMAAASLEAATTDSDPALAARIAAVLASWAMIRPLYKIPKAKRVQPQSPNGALGDSSRASVSGSFPSTPHVTSAPPLGNGGGFGSEPPTPTLGAGASGGFPSYSTTTPLAGGYPSYSSMNGRSMPVFEPREYRSDDKDLRYSRKRSAEDDQDYRRRSEDDSNRRRRFDDDTHSHSYTRREDVPAAPETERMSDTTSLAVPAAAPVPIVPPAPRGPTYHWDAKFGYHYYDKDGTLVVKPKTEEEIAMALAQEALAKQGEAHLQRERERARVKKEGKRRHDDKGKRPDKGKRPDKGKKAASSATRSVPENVKLDSRENELWKRFGKGDARKMFDYVYRVLVDVRKMAPDQSALRLTHKLSYGIMDKMLRKHAAVVATEPSAEAPKYNEKAKMAANAFVKNYLSEHPELKMSTKRAGTGAPGDTAAVGDTTVDDGVHGRDGSAVSDGIAADNGGFNGDIHDNSDSNNNINNNNSETGGNGGGDDASDVSELDYDPSTPRDDDDEAAA* # PASA_UPDATE: g9876.t1, single gene model update, valid-1, status:[pasa:asmbl_1758,status:3], valid-1 NODE_1491_length_10965_cov_40.0591 . gene 4580 6907 . - . ID=g9876;Name=g9876.t1 NODE_1491_length_10965_cov_40.0591 . mRNA 4580 6907 . - . ID=g9876.t1;Parent=g9876;Name=g9876.t1 NODE_1491_length_10965_cov_40.0591 . five_prime_UTR 6735 6907 . - . ID=g9876.t1.utr5p1;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . exon 5974 6907 . - . ID=g9876.t1.exon1;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . CDS 5974 6734 . - 0 ID=cds.g9876.t1;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . exon 5341 5469 . - . ID=g9876.t1.exon2;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . CDS 5341 5469 . - 1 ID=cds.g9876.t1;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . exon 4580 5087 . - . ID=g9876.t1.exon3;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . CDS 4598 5087 . - 1 ID=cds.g9876.t1;Parent=g9876.t1 NODE_1491_length_10965_cov_40.0591 . three_prime_UTR 4580 4597 . - . ID=g9876.t1.utr3p1;Parent=g9876.t1 #PROT g9876.t1 g9876 MADMLPLAAETPMESTTVHSREAKDAKAVRIGLLGTGWGIRSQLPSLRAVGFNVVGLWGRTPVKAQTIAAEHNISFATADPVELAVHKDVDFVVVTTPPHLHADVSVRALQNGKHVLCDKPTALDQSEAARMVISSRMNPRQLAIIDHELRFLPAFRKMRDLIRGGYVGDIMVLDARLAMGPLVRGDFSWLCDADMGGGALGALGTHMFDILSFVTGLRAMAVHGVLGTYVRHTDHIRGYRHITSDDYCSIQLKYPGGILGTISLNTHMPGKFVQDIVIVGSAGRLAVRGCKLYGSHGSNPEELLLDETSLESPFILATRYFFEALAGFFRANPHVCATTQSVSGSPSASSLPTSPTAHAQQHAGHQAVTSGILVPTPAPGNANPSAAPIDMAAIEGVATFDDGLYTQLCVDAVKRSNSSGIWVSVRHELLQQSETNGPFWGQWGDMPSGSSSGGFSHK* # PASA_UPDATE: g9875.t1, single gene model update, valid-1, status:[pasa:asmbl_1757,status:3], valid-1 NODE_1491_length_10965_cov_40.0591 . gene 250 4172 . - . ID=g9875;Name=g9875.t1 NODE_1491_length_10965_cov_40.0591 . mRNA 250 4172 . - . ID=g9875.t1;Parent=g9875;Name=g9875.t1 NODE_1491_length_10965_cov_40.0591 . five_prime_UTR 4016 4172 . - . ID=g9875.t1.utr5p1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 2862 4172 . - . ID=g9875.t1.exon1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 2862 4015 . - 0 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 2459 2570 . - . ID=g9875.t1.exon2;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 2459 2570 . - 1 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 2122 2260 . - . ID=g9875.t1.exon3;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 2122 2260 . - 0 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 1897 1988 . - . ID=g9875.t1.exon4;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 1897 1988 . - 2 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 1437 1532 . - . ID=g9875.t1.exon5;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 1437 1532 . - 0 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 954 1193 . - . ID=g9875.t1.exon6;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 954 1193 . - 0 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . exon 250 771 . - . ID=g9875.t1.exon7;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . CDS 508 771 . - 0 ID=cds.g9875.t1;Parent=g9875.t1 NODE_1491_length_10965_cov_40.0591 . three_prime_UTR 250 507 . - . ID=g9875.t1.utr3p1;Parent=g9875.t1 #PROT g9875.t1 g9875 MSQCRCDTKPIPLANRTQWASATPICVDARATLPVTAPVASVSHGKVVVAVRPRKDFRTWPIRRGAHIVYADVDAEGITALMAECTLPSGAHVNTLDDKVDGRVSPDSGSACDDTAKVGVTLASPRSDSVDDDAKLKSTAKPAELVSRTSLSSLGTAVLGEAKGRDELDGTDSGCDSADIPSTSSQPATGIEAPSPLPVGLGMRRSLSSHSTSSRKKAFDAMGVPGVLPLCVDQCASSPYALGVSDCCTPPFSPANATAAASRAATNASRIISTGSDAVAAVPSVSPALASLATFPGGMLPASVFRTKLETMLSSFDEFSDAQRNVALKLILERARLPQLHLLSVEMEQRLHHCCPHNCQDLVTWLPCDLARHVLSYLDPQSLGRCARVSHGWQRIAEDPLLWRRICQLSSWRSSQKEEERQLLKHTFLLDDGKAFCNWKGIFEERFRLNRNWIKGRFTVRTFAGHSQGISCVQFDDNRIVSGSSDRMIKVWNIRTNTQCTMTLKGHTGTVRCLHLDSQTLVSGSTDCTIKVWDLVTGQCVLTMIGHSDTVRCIRVVGKRLVSGSYDATLKAWDITTGNCLLTLTGHTAAVLCVHSDDTRIVSGSYDKTIKIWDSMSGTCLRTLLGHQDAVTSLQFDDEKIVSGSLDSSLKSVWRTGYHCVKLRNIVLCLTQLLIDLACVCVYVCVRGVSSQCNVISS* # ORIGINAL: g9877.t1 original gene structure, not modified by PASA NODE_1491_length_10965_cov_40.0591 AUGUSTUS gene 7601 8746 . + . ID=g9877;Name=g9877.t1 NODE_1491_length_10965_cov_40.0591 AUGUSTUS mRNA 7601 8746 . + . ID=g9877.t1;Parent=g9877;Name=g9877.t1 NODE_1491_length_10965_cov_40.0591 AUGUSTUS exon 7601 8746 . + . ID=g9877.t1.exon1;Parent=g9877.t1 NODE_1491_length_10965_cov_40.0591 AUGUSTUS CDS 7601 8746 . + 0 ID=cds.g9877.t1;Parent=g9877.t1 #PROT g9877.t1 g9877 METEWPLSRQGFSLVDFIRPSSTGASLSTSSTSSARSTPAPLSLVNSGTTSPPIGSDGAFHPVPPASNHHRRAPPISPIRPLRTDSTGPHAMNSRNDMNGRLGLEGQSIERVLSPRASPTFFGTDAHRQPAEATASRTELRRQMVVPDKLTVASDRGTASPVVEDVFVGGHTHHASLPDIAHPSMLTSGRGRTTSSPSVYPLQQASPSSAPAGASLSVMGFMGGLNGDGMYSAVSAMRAPEDADDGFEGEFDRQSDASSACTDPSFEPFVRTTVGVREMAATVLLEPQSVGFVDGIHLPIGNDDALVALCRQSVEQQVSQGRSVHQLENDLVMARVEVEKLKAENRRLQGRALGRSSEQYWLSFIVGLMIVNSLLFSWRQR* # ORIGINAL: g4147.t1 original gene structure, not modified by PASA NODE_2093_length_7765_cov_36.4979 AUGUSTUS gene 266 2616 . - . ID=g4147;Name=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS mRNA 266 2616 . - . ID=g4147.t1;Parent=g4147;Name=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 2528 2616 . - . ID=g4147.t1.exon1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 2528 2616 . - 0 ID=cds.g4147.t1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 2061 2139 . - . ID=g4147.t1.exon2;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 2061 2139 . - 1 ID=cds.g4147.t1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 1822 1902 . - . ID=g4147.t1.exon3;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 1822 1902 . - 0 ID=cds.g4147.t1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 1239 1334 . - . ID=g4147.t1.exon4;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 1239 1334 . - 0 ID=cds.g4147.t1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 878 1050 . - . ID=g4147.t1.exon5;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 878 1050 . - 0 ID=cds.g4147.t1;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS exon 266 455 . - . ID=g4147.t1.exon6;Parent=g4147.t1 NODE_2093_length_7765_cov_36.4979 AUGUSTUS CDS 266 455 . - 1 ID=cds.g4147.t1;Parent=g4147.t1 #PROT g4147.t1 g4147 MDTQKQLQLSEKWADFLDKSTSTDEFSDFRDIGRGSFGSVVLAKRKADNKEVVLKKIDLGQLEPKLREDAINEIKVLSMLRHEYIIRYECGFLEGSMLNIVMEYADGGTLQGLIRENSNAKVFFDEAVIVDWFVQIAFALGFVHENKVIHRDLKTANIFLTQDRQRIRLGDFGISKVLGAETMFAQTYIGTPAYMPPEMLGSEPRFTAKSDIWALGCVLYEMMTLRHAFIGKENNF # PASA_UPDATE: g4148.t1, single gene model update, valid-1, status:[pasa:asmbl_3484,status:12], valid-1 NODE_2093_length_7765_cov_36.4979 . gene 3110 4295 . + . ID=g4148;Name=g4148.t1 NODE_2093_length_7765_cov_36.4979 . mRNA 3110 4295 . + . ID=g4148.t1;Parent=g4148;Name=g4148.t1 NODE_2093_length_7765_cov_36.4979 . five_prime_UTR 3110 3145 . + . ID=g4148.t1.utr5p1;Parent=g4148.t1 NODE_2093_length_7765_cov_36.4979 . exon 3110 3297 . + . ID=g4148.t1.exon1;Parent=g4148.t1 NODE_2093_length_7765_cov_36.4979 . CDS 3146 3297 . + 0 ID=cds.g4148.t1;Parent=g4148.t1 NODE_2093_length_7765_cov_36.4979 . exon 3745 4295 . + . ID=g4148.t1.exon2;Parent=g4148.t1 NODE_2093_length_7765_cov_36.4979 . CDS 3745 3850 . + 1 ID=cds.g4148.t1;Parent=g4148.t1 NODE_2093_length_7765_cov_36.4979 . three_prime_UTR 3851 4295 . + . ID=g4148.t1.utr3p1;Parent=g4148.t1 #PROT g4148.t1 g4148 MKHFPFRALTVDVLRRTVEASMTLVRNQMRNNGLLDKIRQNRRFIKPAVARRREQLRSVNRIYGMELARKIAVAREFYTREVRFK* # ORIGINAL: g5236.t1 original gene structure, not modified by PASA NODE_211_length_31300_cov_41.7288 AUGUSTUS gene 24770 25531 . + . ID=g5236;Name=g5236.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS mRNA 24770 25531 . + . ID=g5236.t1;Parent=g5236;Name=g5236.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 24770 24921 . + . ID=g5236.t1.exon1;Parent=g5236.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 24770 24921 . + 0 ID=cds.g5236.t1;Parent=g5236.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 25027 25531 . + . ID=g5236.t1.exon2;Parent=g5236.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 25027 25531 . + 1 ID=cds.g5236.t1;Parent=g5236.t1 #PROT g5236.t1 g5236 MGSKLELPVIEHLGRSRERGRRQTSSVSDAERHLKALKAYRNTSMQECSPGSDIEMGPYTTRRLLPAEVPGEEVDDAPFTDTELHGLDTNVSASTDTARTVPAFKGAVKLFDFGNSSRDATWNPVGFSGYAHDFLRTGSESSDRGGTEQQVPAIDGSVFQRQITRPGINFIARSNLRTPFMSSAPVFRNDLSFEMPTSQLAPVPTQDFAFEGPRKFQV* # ORIGINAL: g5233.t1 original gene structure, not modified by PASA NODE_211_length_31300_cov_41.7288 AUGUSTUS gene 18847 19635 . - . ID=g5233;Name=g5233.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS mRNA 18847 19635 . - . ID=g5233.t1;Parent=g5233;Name=g5233.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 18847 19635 . - . ID=g5233.t1.exon1;Parent=g5233.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 18847 19635 . - 0 ID=cds.g5233.t1;Parent=g5233.t1 #PROT g5233.t1 g5233 MVATGEFEGKVIAITGGGTGIGKEAARKYLSLGAQGIIINGRREDVIQNAAKELDPTGKRVIAVAGCVGDPQTGLKIVAAAEAAFGGLDILVNNAGIFSPKKFVEHTEADFDSFVTVILKGTFFTAQAAVAAMRKRGGGAIVNVGSMWADQAIGATPSSAYSAAKAGVHALTRNLAIELAADKIRVSTVAPAVVETPVYETFMKPDEATKVLASFNAFHPIGRNGTAADVAESILFLSSPSRAGWITGAILSIDGGVTAGRQ* # ORIGINAL: g5230.t1 original gene structure, not modified by PASA NODE_211_length_31300_cov_41.7288 AUGUSTUS gene 84 1733 . - . ID=g5230;Name=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS mRNA 84 1733 . - . ID=g5230.t1;Parent=g5230;Name=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 1166 1733 . - . ID=g5230.t1.exon1;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 1166 1733 . - 0 ID=cds.g5230.t1;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 753 934 . - . ID=g5230.t1.exon2;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 753 934 . - 2 ID=cds.g5230.t1;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 407 550 . - . ID=g5230.t1.exon3;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 407 550 . - 0 ID=cds.g5230.t1;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 84 203 . - . ID=g5230.t1.exon4;Parent=g5230.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 84 203 . - 0 ID=cds.g5230.t1;Parent=g5230.t1 #PROT g5230.t1 g5230 MEAEAGGAVVGRTRRGRVGLTRNDASPDNFLVNRSSASAAVADSSRRLSATGRCLSVPLEEEELECDGEADATSAILPSVAETASHASELSAETNGGLPTSSSVGDAEVMGTPELTQRTRHSIGSGTVATPTQSGGASSGSPPQLRQESPGDAQAAASDFEQELFNWAGDLPEVEFMEPSAGKPFHTLVDRLHMEFLFLHGLLICLDSLIYYVSFLFIKFIAALWTLIRRHLLRRKDVVIYPRHILVIMESATVCLSVLLLGAVDFRGIYVFIQKNLSWAKLYVLFQIFGVLDDLMEHTSRRVIGGIVHSVRTGQQRLAMVLMGSVLVTVHSLVLTVQ # PASA_UPDATE: g5232.t1, single gene model update, valid-1, status:[pasa:asmbl_3565,status:12], valid-1 NODE_211_length_31300_cov_41.7288 . gene 3526 18469 . - . ID=g5232;Name=g5232.t1 NODE_211_length_31300_cov_41.7288 . mRNA 3526 18469 . - . ID=g5232.t1;Parent=g5232;Name=g5232.t1 NODE_211_length_31300_cov_41.7288 . five_prime_UTR 18359 18469 . - . ID=g5232.t1.utr5p1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 18220 18469 . - . ID=g5232.t1.exon1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 18220 18358 . - 0 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 17966 18135 . - . ID=g5232.t1.exon2;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 17966 18135 . - 2 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 17600 17745 . - . ID=g5232.t1.exon3;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 17600 17745 . - 0 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 17391 17434 . - . ID=g5232.t1.exon4;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 17391 17434 . - 1 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 16943 17185 . - . ID=g5232.t1.exon5;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 16943 17185 . - 2 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 16664 16750 . - . ID=g5232.t1.exon6;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 16664 16750 . - 2 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 16316 16473 . - . ID=g5232.t1.exon7;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 16316 16473 . - 2 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 16115 16174 . - . ID=g5232.t1.exon8;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 16115 16174 . - 0 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 15742 15920 . - . ID=g5232.t1.exon9;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 15742 15920 . - 0 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 15242 15495 . - . ID=g5232.t1.exon10;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 15242 15495 . - 1 ID=cds.g5232.t1;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . exon 3526 15083 . - . ID=g5232.t1.exon11;Parent=g5232.t1 NODE_211_length_31300_cov_41.7288 . CDS 3526 15083 . - 2 ID=cds.g5232.t1;Parent=g5232.t1 #PROT g5232.t1 g5232 MNTLERSLDELQSNLTSTSPRRFLEANSIVEDIRGVCMRASSEAEIANCSSLLFNRDKGILSFLVDKAAGEQFDKAKGAALSLLTDYIQKGGQRLRPYAAAIKNCCLKTFQDPRASVKNASFEPLKALLTLGFDISSSSTTKDSEMQKLIDTYWNELFRGSQVQPTVKANVLELLGLIAEHYPEDMMTLTSGGTTAARTTRADALIKMYFTFLDKEIAKPKPEYPIIVGSVRGLTSCLVQFTKSVEEGEKTAAEKIYGYAKKFIQDVKASDYKLYIAALCLIAKHASQFKEYLAVDHEAMYRRIRGWCEHSNRDLKNAAFSALESFLQQVASVIVSSNLHLDKKREIFEFFIREFGGIFRSPESDARSVSIAIRGYGYFAPACRLFCSDAQIRTMFHDMLQRTEILYLRDAQQSEESLAHLPSFLNSIASILRQIGTLPDSLLGPIEALAAYFLATFPAVPKSQRASGCKAIAFLLFALFEKGEILRAVLDRLIYPGLMSTLSHPVTTDDSFEEGAVDTASVLQENVHADYRVLWLSILDDSNLHVNISDDARQQLYVAVHDAFMRAILRVIKRLDLSASSDEDGGGADANGASVAALGKQPEDTGATINSVAGGGADVVTSHLHARVPKDFQVFISCVAFCKAVLPRLPSSTVHRWVHLFGQEVIVMATRNPVVSGFYKLFGICLSLCERSRYFEDIGSGEDALIRAARAINAMETDNEHPGDDDQDHVPTDTAVCFLLFRRFVGEVLVRLHQYTDELLAACLQAVLASPTQFLEGGIRDYVPALKIAFRVGLGYLPLANIALDAMERWAATLPRDAIEDQLKQVISGLNEYLRVSTTSADVADDALSATAVPVGASSLPKPSSRRKATAKKQPSAAIWDGGDGTAIGDFRIRVVRFLGLLGGNTSAAVVDAPRTNGDSAGLGNGSNDKAEHVAWSSDNAIKLGVPFKDVKSSIDLDALLPRVVALAVESSDRQTKVAACELLHALTLYALGLSQAGNQSPEPFVLLFGRLMPKLLVLACDVEVVARQLFRPLVFQMIHYLSQAKKFESPLVAVLLNAITDGLGQADATSLRDLCAACTAEFFAYTIKQTTPSEMETKPPANIKSLLKRIYSMAYHPSVSLRLGAAAAFNALYKLFREHDRLVDVYALEILHAILQSLRIADADDPELGTQKQMALAATNMVRTVVKHASLLCDPGRGRRAPVGWETGRPVTLASFVDWLFGECGRYETEYRHVCMELFFQFAPRCGQKDAATAAQWVHSRVSSQGVKYIVGVFERRQPQPVSTGTDGVISVDDQLALFTELQASLECYNWAFAGGFLTDDSALVAPQSRLIGGVASFFNDHVARPVSQLEAAGHTAREIERYRRERCTVVVRAFELANTLIERMRLDQESQFAKRLFSIAFIRSLLSAALDPSALGFDIADLKMMARLPLVTGPLVISMAKSFASGEIRNAMNGAVRDALASGWAREISSGEIDFGRNPHAIASAVSGYEQLLAADLLMGSLMSEGVGASPLSSKLMSAVFEAGATSEMDPTHAHAAGRVLELAFLLKVDVDKFLRMLLDARPTFESDQISLGDAADSSSSDGRTKGAAFFGNFKLQIVSFVARHCDELVPKLLSPSRLISAAAPSVIPDNGKAAGESAGIATRKGLTPALQVVLEMFDAARVEREVGTRRKRIAAVCAASAVKLSSFGLPTASADEQAALFQLIRGTFDLDPEEAAPLVRTYLDLLSLRGPPLSFKVQLLGLLPRVLSCPSADKMAVESTLKQLVSSQFPIHSTELPESGAAYRMYVSALDLILVTLESVGWPGLLNVLVLATCREPKHRHSDAIRRSVGRFVARLSEDDVSSCVGVCHTLVVDAKQPPVVRRAVTDLLVLPMLAAAPLGGLARFVAVRAKELVKTVSDAVPKKYAGASEEEIESDLLSKWYVYRVLACAYDRLPAAMVNQQGNHVNEAFHGPGGKGNEMTFAITKVANAVRTEPSAPKDECAGDLRRQYRCAAWNALAAILVCTQDNPDLYGRLLFAENAAKGMLMWENLVDSERTYTFDVELVVPYDRKAKLASIRQSGGAPVVGMRPQAGAGDKASRLRYLSSQYLVDSSLSQDITANMQPSRAAAAAAAAEERVDASGASGSAVVGSGYGSLSASLVEALGPQDEEGAAAGVGGMGAPGEATSYVVQEDDLESDDLNAHECMPWFLRVVDHVMGKLMKQPDGDGAVDKMPLWMSEMHRRFDAATGVHMNIRYLIAKVVTNRPSTFRPYGKHWIEAMMRLVLSFESQPAPAAAPPNLATMASEGPSPLEGLNYFVVDLFVSMLSWAPVAVPEGVTQSSIATRLVRFLVARCYHPTRAVLRNDIEIFKTAVECWRASVSVPMLGIYRNLSSPNPDDARNTTGIQLLAVVVVNDLGTNPAADPEAKAAGLDERKLLDALVANVAYKRKEVYSAAAEVVGMILAQKNSAKDVCGRDALMGLLRVRLKRLQETQETDRLIVCLHKAHINYPEVVDEYLTNIFYLLPNLYGEFKTQALEMILARAGDVPDVFMNLKGRDLPGMLRHRDEATQRLVLAIVLKVLKGLDKTEIRGLLGNILQTFPSHDSAACRELMYDILAWLYDHARDALSLLATPGAESDEDLAVRNQLLLGLSDENDGVRMKVRRFWNHETRLPLEILRRLPHVFTTLYTPASEASYLGQAVWLLLEPSRHGTDWDLPILSAPLGSCVFKEYAIDASWQHRNAMTPMFAATQSSQSDATYAGTMMEVGLVRATQDASLQFTPTQDMGAAKFTPGVVGRPPMRGDTFTQSQAAASKSSLMFRQTRLSSSQTQLGATIAGGNSGASQSADAKANERMTNREVLLLRRRFVKNSAPDASIFHARRIQRMKDVQADTARRQRAARANTVTMLRSYKIGEIPDVLIKYRELVQPLQSLATRDANVARQLFRMLFSTLYAEIGRSPIDAAKAAALATVRAGFVRLLQRSSLYFPPFVACMEEVSYVTDLTLERSSVAVSSLRSITYPTGILVLEKGIATVKEANLATRKEVEDRPKPPKGKRARTEPPAQQPSGMAAASVGDAADEAGGGVPEDWLEVSRLYRASGDFDVVLGISRKELAESIDSKTKDALALEADGDYHAAQLKFAEALSEHTAGNVPAAGGVALVERRLCITSRLECCNRLADWSALEAAVGETLSSECGSVDPSCMWQERNRAIAEEILPYFVRAHVKLLVGSIVEMDNSGKDDDAPRDGKMIYEFIDAAMAVETHREQLLRFTDELAVLSVVRGDLDRARYYSAQSTASFLADWSSLHPQMKTARHARLQLLQRTIEMDEYLRHVADPVKASSVDAFRGLLRRWSSRFPHPRLQPLNVWDDVVSYRELYVRGISETLRESVCGVRCDGDDGDDDNANDPLVPIRGEIATQRILSFLKVSEAARKQRNYAVSAQYYKKTFVAMLADKAHLTNLPELKIKWLHVGARRQRDQSRSEMLDSIDRVNNMAQTLLSLTSEDANVLKIGVTTARRHHRLKFDALVLLESIEDVASSLAESVHRDKLARLLGESRIPTDPTELSTLLLRRAMASVTSAVTAADHPSDAGPSVTSAAVASLSAAKARLALASFAGTVLRRGKEAALRSELGGRSSFGAVVVENTLAAMQLGLPAARDHFPRALEVVGDHLGDCMDAFLLAAPGVPCWMFLQWLSQMVAVLDKPEGRAVVGPLEAIAKAYPQALYFPLRISREQLCFAPTKEGSDMKAAIERVESLVSSPTLDRFVKGLEELTHLENVLIDWIRNELPALIEKRDAAQARSSFEELKAMLFGVAPVHGTESAKAYRPSFANEFKGPLLSACGTHGEKIADKKVDGDSLRKQIESLIPRLRERLSGKAPGLLKEYSPWLASFRASDYPDSPIEIPGQYAGLSKPHPAYHVHVSSFDERVVVLSSLRKPKMISIRGSDEMDHRYMVKGGEDLRLDQRILQLFALMNRVYASDARCAQRGLSVRTYLVVPASTRVGIIEWMSDTRTLKDVVEQQLVADGSADGSAKGGPLNAVRTEYVDHFPALDYMEMYKSMKLTDCAALMAKLHAMLPADTLRRAMFGMAAGPEAFVTLRSKYATSLAATSICQYVVGVGDRHLSNHMIDTATGGIVAIDFGHAFGSATQFLPVPEMVPFRLSRQMRGVMTPLSVDVSLRPAMVHCLRALQEHCDTLLVPMSVFIKEPLLDWEQNARRQAKAQSKTFAPSLGAAPTPTPAPAARGGSQGGRSRGAGAASAAGAGGAASSEAMNVEHFARQKLEVVRRKLCLENPAHITAHELGLGHARNKMFEKMTAVAMGDATRFRSRVGARCQSVEEQVDCLIDMATDPNILVRMWHGWEAWV* # PASA_UPDATE: g5231.t1, single gene model update, valid-1, status:[pasa:asmbl_3566,status:3], valid-1 NODE_211_length_31300_cov_41.7288 . gene 2010 3271 . + . ID=g5231;Name=g5231.t1 NODE_211_length_31300_cov_41.7288 . mRNA 2010 3271 . + . ID=g5231.t1;Parent=g5231;Name=g5231.t1 NODE_211_length_31300_cov_41.7288 . five_prime_UTR 2010 2099 . + . ID=g5231.t1.utr5p1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . exon 2010 2180 . + . ID=g5231.t1.exon1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . CDS 2100 2180 . + 0 ID=cds.g5231.t1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . exon 2366 2449 . + . ID=g5231.t1.exon2;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . CDS 2366 2449 . + 0 ID=cds.g5231.t1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . exon 2611 2703 . + . ID=g5231.t1.exon3;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . CDS 2611 2703 . + 0 ID=cds.g5231.t1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . exon 2845 3271 . + . ID=g5231.t1.exon4;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . CDS 2845 3027 . + 0 ID=cds.g5231.t1;Parent=g5231.t1 NODE_211_length_31300_cov_41.7288 . three_prime_UTR 3028 3271 . + . ID=g5231.t1.utr3p1;Parent=g5231.t1 #PROT g5231.t1 g5231 MEANTAEDWKVTVRVGDTLSGEKEAVQMYKVEVRTPHKHTCVNKRFSHFVDFREEMRQIYKYKHPHLADNIPELPPKQLKFRVDHSDPHFIESRRQGLEQFCHRLLSIPHIVESDEFHLFFTGSDKNGGLMYSPASSPRNSISGVI* # ORIGINAL: g5234.t1 original gene structure, not modified by PASA NODE_211_length_31300_cov_41.7288 AUGUSTUS gene 21258 22411 . - . ID=g5234;Name=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS mRNA 21258 22411 . - . ID=g5234.t1;Parent=g5234;Name=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 22255 22411 . - . ID=g5234.t1.exon1;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 22255 22411 . - 0 ID=cds.g5234.t1;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 21918 22144 . - . ID=g5234.t1.exon2;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 21918 22144 . - 2 ID=cds.g5234.t1;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 21483 21562 . - . ID=g5234.t1.exon3;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 21483 21562 . - 0 ID=cds.g5234.t1;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 21258 21378 . - . ID=g5234.t1.exon4;Parent=g5234.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 21258 21378 . - 1 ID=cds.g5234.t1;Parent=g5234.t1 #PROT g5234.t1 g5234 MIVFYQVLTLNVAVNSEQSALLTLLVSNQFMELKSNVFKKFEAHNLFQVACHDIVERFQIVLFLAIISLRNLSELSWDMGYFFDKLVWDLAMVYLSECALDWIKHAFITKFNQIPADVYTKFSTILSRVYRTFSHTIPFPRGFDGVLVVVTLYLTLCALKILLSIVLLGRACRRYRTHGDETLKDSWVGKTDPS* # PASA_UPDATE: g5237.t1, single gene model update, valid-1, status:[pasa:asmbl_3567,status:12], valid-1 NODE_211_length_31300_cov_41.7288 . gene 26034 31300 . + . ID=g5237;Name=g5237.t1 NODE_211_length_31300_cov_41.7288 . mRNA 26034 31300 . + . ID=g5237.t1;Parent=g5237;Name=g5237.t1 NODE_211_length_31300_cov_41.7288 . five_prime_UTR 26034 26151 . + . ID=g5237.t1.utr5p1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 26034 26325 . + . ID=g5237.t1.exon1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 26152 26325 . + 0 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 26476 26657 . + . ID=g5237.t1.exon2;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 26476 26657 . + 0 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 26763 27033 . + . ID=g5237.t1.exon3;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 26763 27033 . + 1 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 27297 27415 . + . ID=g5237.t1.exon4;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 27297 27415 . + 0 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 27625 27689 . + . ID=g5237.t1.exon5;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 27625 27689 . + 1 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 27989 28530 . + . ID=g5237.t1.exon6;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 27989 28530 . + 2 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 28874 29783 . + . ID=g5237.t1.exon7;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 28874 29783 . + 0 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 30145 30326 . + . ID=g5237.t1.exon8;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 30145 30326 . + 2 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 30592 30704 . + . ID=g5237.t1.exon9;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 30592 30704 . + 0 ID=cds.g5237.t1;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . exon 31087 31300 . + . ID=g5237.t1.exon10;Parent=g5237.t1 NODE_211_length_31300_cov_41.7288 . CDS 31087 31300 . + 1 ID=cds.g5237.t1;Parent=g5237.t1;3_prime_partial=true #PROT g5237.t1 g5237 MASRARIVNARVGRIALCVAVMLSIASCVNSVPVSVTLLHTNELDQGVAASPFDRVNNAIVGGAARISTLFNNVRTEVDASRVITVDAGTFLSSTRLLQKNGTVVYRAIADSSKYNFLGLNSGDLFFGTPPLRQLLLGANFKTVLSSIDDRGIDFFSDLIVRSAVLNMTVDGVAFKVGFVGYTRPDLCRRTQCNFRIRILDQNVALKAEILKLRTLNKVDFIIALSGAGLAVDRTTAAAVPGIDIIVGRGTHLGNNDSVAAGPYPTKIVNDGRTTFFVSTFGQGRYVGRLNVTLDIDVADPSKSRVLSATGNTVLLRACADDSNPTPNCVVPDPTLNALITNTLTSINSSNSVIATNNANMDNARCFLGECELGNFMSDALVDYASGQCDIAFINTGTFRNRINSGPVLQYTVEDVGFPTNTISAVQLLGVDLLNVIQLSISQITLSPFLQISSRLQVTVNNDLPAPLRAVSVALLDKTGQNPKPIDPAAIYFICTNNFVRAGGDNYVMFLSTSVVQDALDNIGGITDATVQYMAKSNTYNVNTGRFKFVNSATAAPNEKTPTVGDCIYTSSIPFANNTQWTDVCSSTFRRQTAVTVNFVPGSLVINGATRQPVMHRVSLLSANRTIANDETIVLYVSDPAQPIYYVDVTPSAEPVLRLARFTSTSFQMPSTFYVQSGKFSVSVTSAKSTTAAGLGLSVSSLYGCPPGYGNDGSSCTPCPMGTYSAQLSGTNATCTACPPRTYTLTAGSSMCLTRSDGVNMGLRLFFLVTTCVFTFATIVVALLLFRYQEQKIFKLASPTFLFISLLGAIMSFISILVLYPTDLTDGLCNASNWNSHLGFCLAFGAIFYKTYRIMMIINVRSARGIKLSDLDLFKRLLVIVAVFLIYLIVWTAVQPSKAEYVIDGDVQYMRQVTPFPSPPPPPL # ORIGINAL: g5235.t1 original gene structure, not modified by PASA NODE_211_length_31300_cov_41.7288 AUGUSTUS gene 23317 23742 . - . ID=g5235;Name=g5235.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS mRNA 23317 23742 . - . ID=g5235.t1;Parent=g5235;Name=g5235.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS exon 23317 23742 . - . ID=g5235.t1.exon1;Parent=g5235.t1 NODE_211_length_31300_cov_41.7288 AUGUSTUS CDS 23317 23742 . - 0 ID=cds.g5235.t1;Parent=g5235.t1 #PROT g5235.t1 g5235 MDADDERPAGVRAQDDVRNEFTLSPQTNHLRAMSAKPPPLKLVPMKPLLHPVEKNDTSGRPQLSTPGTPGFRLSRSQSSLARLGGDVPEQRRGLSLLGFLRAELARGYLRESDEALYDAKRDRVYMFMQIPKALEKVRECA* # ORIGINAL: g11815.t1 original gene structure, not modified by PASA NODE_703_length_18864_cov_42.1209 AUGUSTUS gene 760 3587 . + . ID=g11815;Name=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS mRNA 760 3587 . + . ID=g11815.t1;Parent=g11815;Name=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 760 982 . + . ID=g11815.t1.exon1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 760 982 . + 0 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 1249 1378 . + . ID=g11815.t1.exon2;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 1249 1378 . + 2 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 1492 1635 . + . ID=g11815.t1.exon3;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 1492 1635 . + 1 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 1851 2041 . + . ID=g11815.t1.exon4;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 1851 2041 . + 1 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 2187 2303 . + . ID=g11815.t1.exon5;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 2187 2303 . + 2 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 2697 2814 . + . ID=g11815.t1.exon6;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 2697 2814 . + 2 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 3026 3239 . + . ID=g11815.t1.exon7;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 3026 3239 . + 1 ID=cds.g11815.t1;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 3468 3587 . + . ID=g11815.t1.exon8;Parent=g11815.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 3468 3587 . + 0 ID=cds.g11815.t1;Parent=g11815.t1 #PROT g11815.t1 g11815 MTRKACVVTFFDVSVPFFVALCPACSNGGDTNNGASSASSLPESEGIAAKKRRVHLNFDDLQQCYFDTRQKFALSGHPHDALTVFSDCLSNFTRFSKFRVLASLKYGDIFGSNNIVSSIEFDRDDEFFATAGVTKKIKIFEYETIMRDPSDIHYPMREMACQSKISCLSWNSYIKSQIANSDYDGIISIWDAYTGTNVVQFEEHEKRAWSVDFSRTDPTRLASGSDDTRVKIWSTNQEHSVATIESKANICCVRFNPGSSNHLAFGSADHHIHYYDLRKLREPLIVFKGHRKAVSYVRFLNGEEIVSASTDSTLKLWNVSRNECVRTFSGHANDKNFVGLTANGDYVACGSENNAVYAYYKGLSKPVVNFKFGSTNAQTGEEAEDEGQQFVSSVCWKKNSNVLLAANSQGTIKAMELM* # ORIGINAL: g11817.t1 original gene structure, not modified by PASA NODE_703_length_18864_cov_42.1209 AUGUSTUS gene 16297 17951 . - . ID=g11817;Name=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS mRNA 16297 17951 . - . ID=g11817.t1;Parent=g11817;Name=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 17881 17951 . - . ID=g11817.t1.exon1;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 17881 17951 . - 0 ID=cds.g11817.t1;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 17441 17499 . - . ID=g11817.t1.exon2;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 17441 17499 . - 1 ID=cds.g11817.t1;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 16614 17090 . - . ID=g11817.t1.exon3;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 16614 17090 . - 2 ID=cds.g11817.t1;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 16297 16379 . - . ID=g11817.t1.exon4;Parent=g11817.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 16297 16379 . - 2 ID=cds.g11817.t1;Parent=g11817.t1 #PROT g11817.t1 g11817 MVTLWRWCRYSHQLDTVMNPFGVSGYDYEFVLSAIDPTGNVQIAGPAHDDDPKWAQDRINSAIKAMRKAKLPDTDIWEFPHYSAGPAATAAAAKAFKYRYERPIYYTGLLKLTPEGKYVVNAKTKIKPSNAVYVPGHNGGQGFVYPTYDVFGSFMIPENLGYYAPNAADAFRRTPADIVRDAALQMGAVRRNVASFFYHAYYGTEGLAPIIAGIQALGYTFVDPLDLVV* # PASA_UPDATE: g11816.t1, single gene model update, valid-1, status:[pasa:asmbl_8966,status:12],[pasa:asmbl_8967,status:12],[pasa:asmbl_8968,status:12], valid-1 NODE_703_length_18864_cov_42.1209 . gene 4972 15247 . + . ID=g11816;Name=g11816.t1 NODE_703_length_18864_cov_42.1209 . mRNA 4972 15247 . + . ID=g11816.t1;Parent=g11816;Name=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 4972 12039 . + . ID=g11816.t1.exon1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 4972 12039 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 12274 12369 . + . ID=g11816.t1.exon2;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 12274 12369 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 12636 12706 . + . ID=g11816.t1.exon3;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 12636 12706 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 12853 13021 . + . ID=g11816.t1.exon4;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 12853 13021 . + 1 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 13346 13405 . + . ID=g11816.t1.exon5;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 13346 13405 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 13631 13691 . + . ID=g11816.t1.exon6;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 13631 13691 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 13995 14063 . + . ID=g11816.t1.exon7;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 13995 14063 . + 2 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 14227 14276 . + . ID=g11816.t1.exon8;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 14227 14276 . + 2 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . exon 14573 15247 . + . ID=g11816.t1.exon9;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . CDS 14573 15193 . + 0 ID=cds.g11816.t1;Parent=g11816.t1 NODE_703_length_18864_cov_42.1209 . three_prime_UTR 15194 15247 . + . ID=g11816.t1.utr3p1;Parent=g11816.t1 #PROT g11816.t1 g11816 MLREAAPTSPDADGSQLDSAILKGASELHPSTVPSSIPSLIPTDAVADSVVPAPSHDMPTSFDDILSNVYLRIMTHTNTTPSTPLLIDVALSGSYSLTDSAPTLSFGAGVTLRLRARAVLSSITDNGQVTVSCTPPAHVSHDAAGGIGDWDDHLLPRPPPLFHVASGGMLVLEGIAFDNCDITMARADGGATVEVSACSFSSDTCVHTAPTLSISGNCSVADSIFSCADWDDDAAATALALAAMQLDGMDSSGISPLADYRIAMPVVHAEGRAVVNISDCAVFRRRLMRASGVSRSHIGGTSASDCGGMCIEASDGAVVGVVESVLDGRTLVDARGNARVELNDCHVLSGAANASTGGTFSAFNCVSIGVSQSAQLSLLGGLFSLRDQCDGIRLAGNTTALVSGVSMAAFNVSFVWDISESASLTMVGTSVDAADPSVGAVGRHSGDSRATLSAVHISAVCALSASNGAVIAGEFVTVYATVNAVGSDANANAFIFADDSVGTFSDIALGATGDAVSGYSLDMRHIFRVGGQSNVTITRGSCDNCPGLIYGDGRARITLQDVIVTGQTVFPGPPALMWMLNFSIDILKGAVFVLGGNATLDAVGCSVSNLPSASFGGVGYLSGQSRAVVAGMSVDVSGGSVCGGSVFFVTDDALVDIRHSTILRLYSILFYSDVSTIGSASGAFALDGNGAIFLEYVNITHSQSVLGGVIHAMGKSSAFVRHLYVENTVAMWHGGVFSFVNESRGVLESVTVESSYASIEGGFLHADDSASVTVADAVLGNMEAYRGSLVSARGAAVVSVMRASVSNALCKLYGFVGVGGPNNRDPRFSRPQPGQVYAAVSRLGGCLAAASGAAANLSLSDVSADIVETDFAAAAIASSGRATVSALRVRVASAHAVGRAGIAWAMDDSVLEIASLSFQRSASDAEGGCLVASDAALLQVSDVDGHNTTAALTGGFLYSESGAIALLSRVTLSSSSSIRNGGFAAVIGSGVFAIDTSKLTNTRSSASGGFIFATDAARVTIRNVTVEGAEAADGGAFFLSGGALLGVTKCSFSACVARASGGWASLSATSALNVTETTLANCTSSTFGGAIAMAGASIASLINVSAAAATSGMDGGFAAQWGSSQLSITDSDFEGMAATSGNGGFVSMAGSAVARILRVAVRHTYAGSVGGVIGATGMAAQSQLHVDDCLFEDSVSRYSGAFLAIAGHCDVHVTHTQVVRAVSDRGAPGVLLRGSARLAMKDVQMFDVQRRAEYAGEGWMSAVPEAITALSDVTCENCTESFLLNSSFSISAHYANVWPGSQFDRVLSVNDVTLFLGRIVDPPQDSHVTLFLPTPVMTAAAIAIESSNAYGYINLILQRSTMRIRNTALWGQLVMEDMVSVRVEREGRAVFDTVRIVNSDVTIEGEAQFVRTDFVDGQVHLLGLGVLHCAECTFTRTASLTQRRRAISTTYGGSISPLIILEEMASAWLTNAVVRGAQVTGNGGFALMRDSSLLRMNGGRVEATSCSGDGGLVYTEAPLTGEGLQYISLNGLHIRSASANGNGGILSLTSNSAAYFQDCTLEVESVAGKAGGAFHMMDTASLTITNSSFASSRAGKVGGGFLSGTGSVTATFASVCVLSAVSDGVGGFASLASSSSNLEPSLTAVGLTVGSSQAGSNGGAFYVAGALVRVTDSFFESGYARTSGGLMHLAGEIPSDVSFIDSAFANFSSGFRGGLVSLMDESTLALDRCNVTNIASVVYGGAVVVAGGSAAIVDCAFRNTISLDGGGGSLLVQSGTLTVVRSSFKVTTAALSGGGFLLAQAVGEVTLHDVLVENSSADNAGGGVFSLSGLALLRATRVTVRDGVCMGSGGVLDIDDRAVAHFDNLSVTLSSALTGNGGAIACMGRSAVFVANATLTDIQAANFGGAISTDGSAHVSMSGVNIARTASFSGSGGAVALQSNSRANFTEVAIVNATAKQFGGVVYCGDTSVLDTVRLSSTASHATEGGFVFVGEGASARLANSTVHGATAAANGGCFYLASLNVTIRHGLYSGCHASGSQSTYGQGGFLYSASTPRSATTGVLLAAVNVDDSFASSGPVVFSQGTLDLSLVDFASIGSRETLFSDGNVTFTSPPTQLRLRFAGVASNESSLLSTVATVTSGSSLPAMNVTLLDAYGQAAFSSPALPLAIRLTVMEANSTCKLAGDLTRTFLLSSAAEFSNIRISSGTVPTQCTLGLIPDNFLYDKTLALFTSTLRVVHIMSCSVGTELVPDSAQAGMFTCVAIAEGAGGPVQSSSSSSIAVIVPVVVVVFCVCTLVCAVAYVWVRKNRQRWNQKQMEDFAQHVQSNMPALIDREIPRENIELQDVLGEGAFGVVYRAQVLLGDRIRVCACKALKPGAAVDQRIEFISEAQIMIDLSHPKLVNLVGVSMAVEPMLIVLEHVTHGSLKGFLQKIDQHRRDGQSVAYGPVFLGFALDVAEGMEFLSSRKIVHKDLAARNVLISSDLFGEYFAKVADFGLSRSTGDKDYYRKSTGGAIPIRSTPPESVLNGLYSEYSDVWSFGVLLWELYSFGQIPYAGIANADVIASVRRGVRPERPEACPDAVHRLMCTCWEKEPSDRPSFAELVSAFTIMRSAPTGDVDTATTLTQMIDVTVGDDPLPALAKAPHQILRLDKLQSGQGSYANLPPSALRRVVPSPYNYDNSAVDLSTAGTVTSCVVDHPYDTPIGIDSEKESADPAGTDGHCQKSDTGVTVASVHICDADLLANGRVGVVSVSESGV* # ORIGINAL: g11818.t1 original gene structure, not modified by PASA NODE_703_length_18864_cov_42.1209 AUGUSTUS gene 18069 18653 . - . ID=g11818;Name=g11818.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS mRNA 18069 18653 . - . ID=g11818.t1;Parent=g11818;Name=g11818.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS exon 18069 18653 . - . ID=g11818.t1.exon1;Parent=g11818.t1 NODE_703_length_18864_cov_42.1209 AUGUSTUS CDS 18069 18653 . - 0 ID=cds.g11818.t1;Parent=g11818.t1 #PROT g11818.t1 g11818 MQPFYDRFGFKWKLYDFGAVSSVVYKGVALKRSPANFNGIMTYWQLNGSFVDPIGVVVPADGSAQYPWGVRSHGSFYYLGENPFLYGATEGDRLLILHDLMYELLAPNTAEEHLALVRIEDVGPTAKPDQLRAIADFLYSQGVPFSVATYPLYQDVTGAYSGGTPTTLKMEDAPDVVAALQYMVSKGGRIVLHG* # ORIGINAL: g10437.t1 original gene structure, not modified by PASA NODE_4284_length_1878_cov_27.6545 AUGUSTUS gene 239 1657 . - . ID=g10437;Name=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS mRNA 239 1657 . - . ID=g10437.t1;Parent=g10437;Name=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS exon 1210 1657 . - . ID=g10437.t1.exon1;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS CDS 1210 1657 . - 0 ID=cds.g10437.t1;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS exon 899 1028 . - . ID=g10437.t1.exon2;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS CDS 899 1028 . - 2 ID=cds.g10437.t1;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS exon 563 724 . - . ID=g10437.t1.exon3;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS CDS 563 724 . - 1 ID=cds.g10437.t1;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS exon 239 350 . - . ID=g10437.t1.exon4;Parent=g10437.t1 NODE_4284_length_1878_cov_27.6545 AUGUSTUS CDS 239 350 . - 1 ID=cds.g10437.t1;Parent=g10437.t1 #PROT g10437.t1 g10437 MTSAFDRPVLVQGFLGMNRAVQGDIVAVEILPRDQWVRPTDIVLDDAVDVAETAVVDAPSDAAGATGGAAACDSVYRPEPPPPTALVGGLGGRAVAGKRKAEAIGVEDPRPTGRVVGIVRRNWRPYCGMLLASPGEHAIEETEAQGSDGALRRWLFIPVERRVPRIRIQTRQGTELAGMRIVVAVDGWSRNSKYPHGHFVRSLGPIGDKSTESEVLLIEHDVPHHPFPPKVLACLPKMPWTITPQDRAARADFTHRDICSVDPPGCTDIDDALHCHPLENGNYE # ORIGINAL: g901.t1 original gene structure, not modified by PASA NODE_1541_length_10603_cov_41.3047 AUGUSTUS gene 3185 10107 . + . ID=g901;Name=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS mRNA 3185 10107 . + . ID=g901.t1;Parent=g901;Name=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 3185 3347 . + . ID=g901.t1.exon1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 3185 3347 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 3500 3663 . + . ID=g901.t1.exon2;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 3500 3663 . + 2 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 3923 4000 . + . ID=g901.t1.exon3;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 3923 4000 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 4197 4900 . + . ID=g901.t1.exon4;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 4197 4900 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 5140 5572 . + . ID=g901.t1.exon5;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 5140 5572 . + 1 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 5890 6027 . + . ID=g901.t1.exon6;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 5890 6027 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 6397 6489 . + . ID=g901.t1.exon7;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 6397 6489 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 6639 6710 . + . ID=g901.t1.exon8;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 6639 6710 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 6886 6969 . + . ID=g901.t1.exon9;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 6886 6969 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 7556 7698 . + . ID=g901.t1.exon10;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 7556 7698 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 8016 8461 . + . ID=g901.t1.exon11;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 8016 8461 . + 1 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 8675 8772 . + . ID=g901.t1.exon12;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 8675 8772 . + 2 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 8980 9048 . + . ID=g901.t1.exon13;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 8980 9048 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 9389 9487 . + . ID=g901.t1.exon14;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 9389 9487 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 9777 9917 . + . ID=g901.t1.exon15;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 9777 9917 . + 0 ID=cds.g901.t1;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 10093 10107 . + . ID=g901.t1.exon16;Parent=g901.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 10093 10107 . + 0 ID=cds.g901.t1;Parent=g901.t1 #PROT g901.t1 g901 MEGDADAIGRRVAVPNGRTACALGTVAVATRVFWEDVKWLGVIMDEPWMRTGFMVPTTGTAHGRRFFKCRPGLGVFVPEDMTLPEASALQYRGAAAEKAASRFQSLYRKHRSREGVIQEIRSLQAFPSEFKVGAKAILHLESSDEDCTIRYIGPTMLGRGVWAGVELALPNPTAGDGTAGKERLFSCVEGRGMYVRLAHITVKRERWALLSAAVTLTTAARIASWDAATAKPAIKSFSSVASKVAMASKFVKNTGAALPKSKRDVSWQDSAADRHASKAPMPAPTSATAGPTTSTKPSGSASDLTPAELKLCGKLRERMFRTRGNGSAAWKGVWSSVRDKEGESMVAELADMLRARGGTFRDPDFTPTDKSLFMDPSRPAKFHPEFLTDTNGKRVPIEWKRPSEFGDPTAVARVFSEGIDPDDIHQGILGDCYFLAAIAACAKRNMLVEDLVVEDHDDVGIYAVKFFREGAWVTVFIDELMPCYKQGSEWVPAFCRYGRDNPKEKETWCMIMEKAWAKLHGSYEACIAGDTIDALNYLTGGTTMNFLLPSDGADEEATNEAWEKATALEKRIPFMASEVRHSLSSEFAKTKGLISDHAYSVLALKDTRSDVRLVKCRNPWGEFEWSGDYSDNSRVWTADLKREVGYVNSDDGSFWMAFRDFAEHFENIGLCLPLPLGYNYASIRGSWTAESTAGGCAIETFQFNPTYSVECDEGPVVFTAAQQDIRGSETPFLDFRLFVFRNPTGPLKPSEAVLTVDCIRRTASAEFSVPKGRRKDRLVCVVAAWGAGVEGTFWLTVSSRSPIAVSQFVPTEVTSKDAQRMKAVDSRIPLCLVCNTPVEGVFYAYVEGKCHSKCNQRYVEMTSDKCHQCNEPLCAVQGRFSGQYFVLVIASNEHKVHQECYETFQEKNAPKCAHCKKSIREDKYKVFKDGTTVHDNCFAKYTETLAPKCCQCQLPILATGKFSGKFYRVLDDTDQCTSM* # ORIGINAL: g900.t1 original gene structure, not modified by PASA NODE_1541_length_10603_cov_41.3047 AUGUSTUS gene 336 1202 . - . ID=g900;Name=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS mRNA 336 1202 . - . ID=g900.t1;Parent=g900;Name=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 1141 1202 . - . ID=g900.t1.exon1;Parent=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 1141 1202 . - 0 ID=cds.g900.t1;Parent=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 799 901 . - . ID=g900.t1.exon2;Parent=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 799 901 . - 1 ID=cds.g900.t1;Parent=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS exon 336 510 . - . ID=g900.t1.exon3;Parent=g900.t1 NODE_1541_length_10603_cov_41.3047 AUGUSTUS CDS 336 510 . - 0 ID=cds.g900.t1;Parent=g900.t1 #PROT g900.t1 g900 MVKIKKQQVSEGPAMAPARGRSLRDLTEAAGMAGLAFLSEIEKGAPIQTNNKPKEGMACVRIFTPDNSYASFVVSEDATAGDLAAKSFRKWSLMTGSDQSVEHCLFMVTFDKE # ORIGINAL: g408.t1 original gene structure, not modified by PASA NODE_876_length_16346_cov_87.2304 AUGUSTUS gene 5518 11977 . + . ID=g408;Name=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS mRNA 5518 11977 . + . ID=g408.t1;Parent=g408;Name=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 5518 5631 . + . ID=g408.t1.exon1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 5518 5631 . + 0 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 6156 6235 . + . ID=g408.t1.exon2;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 6156 6235 . + 0 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 6742 6929 . + . ID=g408.t1.exon3;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 6742 6929 . + 1 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 7285 7503 . + . ID=g408.t1.exon4;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 7285 7503 . + 2 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 7897 9848 . + . ID=g408.t1.exon5;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 7897 9848 . + 2 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 10080 10948 . + . ID=g408.t1.exon6;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 10080 10948 . + 0 ID=cds.g408.t1;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 11362 11977 . + . ID=g408.t1.exon7;Parent=g408.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 11362 11977 . + 1 ID=cds.g408.t1;Parent=g408.t1 #PROT g408.t1 g408 MKTRKQTFVYEHDWEVVVFAYLQRYPTHPRMPILLSSKIISETKDADGKVITIVRECVVDAEGPSWLKRAINLYDFTFLQTTVIDYNKRSMDISNRNLTFDGKLSLTEECCYRAHTDNPHWTYFEQQGNLNLPTWVPFVNHVEKYSLKSYDKNTAQGRTLDLVFIEEALASGSFARDQQRRLGEGASSVAGDTKVVDETAGAESSDGSDDGDYFDPELASLAPDGDIAGIEPLPGSSASQGLKLARKKKGAPGKAKLSSSIIGSIVLEDGDYTRGGDGMTPMSSGAQLQDMQQTQRMQQEREDLLESGDGRRRNQNSGGFSETTDDSDIARDEEDEEGEEEEEGDDYRSLDASGGAGRPSIVSRASVGNGRHARASSAPVTFRAAVDVATQTVLTGTGREPFLSSLVQRGFAYAAGIALWFVLSQFRAAGVAEHATAALIAVTSAMFEMISYRRRLDDASHTLAPSAHAHAGSDGTGHNGGADSADISPSKHSSSRKETPPNKAGHVTRTAASEAKDGAGRDPPSVHAASSSLSLQQQLSGSGGSARRADNGGGDLTVEHVSIPAWIERILGGKRRAVFAVRVQCGQSSWVKYMQLDDFAVLDRTFRQLASAQPSGGSGSGGSGSGGGGGSASGSGSGAGGASAAIVNYVSSYMTFGSQRSQVGLIEPPPKRVWDVRRTASVEALRASLEHYLVSLSQDSVVRRCRVLDVFLQHEQTPGVSGPARSVSQQDRRGYLSSGLLPGISAIGSIAAGIGAGASSASGSSANTVSPASSPYAAQGVAGAASGVGAQSPLSSGTTSSDSSAVVREGLLCRARLRTVWRDELAVLTSRTLRLHGWRNRKGVREVPLREVTRVSMMDQRPFPDGFFFEIETPFQVHHFQCATDDDGRAWVDAISRASERAIMEEAAARGVSLPSQALLQRQREPSASGGAAPDRDTAATKNLVQLMAPHDAEGEYPTGLYALPQFIPGPSGQPGDPPKRVVLNARRTRWGRFDAMHPCQLSHDTLISALALHRDFGHVPLSARMAMKRFCGRLRDHLELVTCLQTIRVAGLTHAESLAFFLNVYHALVAHALLVMDHQQVSVTRRRSFFHEIAYEIAGQPLSAAEIEHCILRAPLSRPAAFLLTQFFVPAKFSATDPRKYMALSVAEPLVNFVVNAGTFSSPSRVWIFTPESLDSQLAVASSAFLEESVEISADRRTVTLPKVCEWFAADFGPQRVDALRCVCRLVTGEKRRSLVKLLSDAQAPQSAIRFRPYDWNTRPMFVLGQFDTELSMVFNQQRQEYQPADELGTLATSSAENVNVPRSTRWKQRLVYGASLFRSHRHRGSPGSGSEDNVLGAENGSPE* # ORIGINAL: g407.t1 original gene structure, not modified by PASA NODE_876_length_16346_cov_87.2304 AUGUSTUS gene 406 4768 . + . ID=g407;Name=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS mRNA 406 4768 . + . ID=g407.t1;Parent=g407;Name=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 406 531 . + . ID=g407.t1.exon1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 406 531 . + 0 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 1035 1139 . + . ID=g407.t1.exon2;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 1035 1139 . + 0 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 1313 1350 . + . ID=g407.t1.exon3;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 1313 1350 . + 0 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 1697 1830 . + . ID=g407.t1.exon4;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 1697 1830 . + 1 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 2039 2084 . + . ID=g407.t1.exon5;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 2039 2084 . + 2 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 2210 2405 . + . ID=g407.t1.exon6;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 2210 2405 . + 1 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 2535 2659 . + . ID=g407.t1.exon7;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 2535 2659 . + 0 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 2909 3312 . + . ID=g407.t1.exon8;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 2909 3312 . + 1 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 3575 3690 . + . ID=g407.t1.exon9;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 3575 3690 . + 2 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 3857 4217 . + . ID=g407.t1.exon10;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 3857 4217 . + 0 ID=cds.g407.t1;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 4464 4768 . + . ID=g407.t1.exon11;Parent=g407.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 4464 4768 . + 2 ID=cds.g407.t1;Parent=g407.t1 #PROT g407.t1 g407 MADKIEGGNSAVELKEVIAEGVVRPSDFSQGKPAASAKPPSEIFTIAWENLSYSVLNKDKTKKNLLVNVSGVVEPGQFCAILGPSGAGKSTMLDAISDRIMESSMEGSILVNGVRRGKNFRRISAYVMQDDALVGVMTVRENITYSARLRLPHDRVGVVERTARVNSLITKLGLDRVADSKVGTVFVRGISGGERRRVAIATELVTDPMIIFLDEPTSGLDSTASFKVIDSIRHMAVTEGKTVMATIHQPSSDTFALFDTLLLLTSGRVSYFGSRESAIGFFASAGHQCPQYRNPADFYLSLLNADFMDDKEEAKRQIEGITMAYEQSDVKRGVTARIAASQELRHATAGDTDLSDAYANNFFIQLGILTQRSFTNATRNILAFWIRVVMYMAMAVLMGTVWLNVGFGQTAVADRLASFFFAVAFLSFMSVAAIPAFLEDRLVFIREKSAGAYHAGAYVLANTLVSLPFVFLIAISFSAIAYPLVGLHSGAEHFFRYLLFLFLALLVAESMTMMFSALVPIFVAALTLASFANGFFMVTEGFFVAKANLPAWIYWWGYWISYQHYAFEGMVDNDFRGLTFDCVPATNTSASCICAYESALNAQCQFLGTDVLQALDYGNIDLAGWAGVLIGMVVIYRFIFFLILNRSTRRK* # ORIGINAL: g409.t1 original gene structure, not modified by PASA NODE_876_length_16346_cov_87.2304 AUGUSTUS gene 13138 16151 . - . ID=g409;Name=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS mRNA 13138 16151 . - . ID=g409.t1;Parent=g409;Name=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 16086 16151 . - . ID=g409.t1.exon1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 16086 16151 . - 0 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 15689 15876 . - . ID=g409.t1.exon2;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 15689 15876 . - 0 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 15287 15334 . - . ID=g409.t1.exon3;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 15287 15334 . - 1 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 14901 15099 . - . ID=g409.t1.exon4;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 14901 15099 . - 1 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 14016 14482 . - . ID=g409.t1.exon5;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 14016 14482 . - 0 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 13622 13697 . - . ID=g409.t1.exon6;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 13622 13697 . - 1 ID=cds.g409.t1;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS exon 13138 13296 . - . ID=g409.t1.exon7;Parent=g409.t1 NODE_876_length_16346_cov_87.2304 AUGUSTUS CDS 13138 13296 . - 0 ID=cds.g409.t1;Parent=g409.t1 #PROT g409.t1 g409 MQEELEKTKAEVASLVAIASQNKVSTAHPGEQPSVTPAQPSTDVTGMADVTGDSEDDDGDAMPQSELSQLKEDNERLSHEVAFSRSQIEDAQREMDRLWKRISVAEAARDDAIRMAEERERTSRRATTRCEEAAVHVEHAESKVGGMESRLSETERELGAAREECEKARAAAQSAAIECEGLRSELAKAHAETDRLASQRNRHRKRADSLALDMSRLLNRTGLSATVVSAAMQMTADGNGSSEGAAVTPSAAHAVAAQQVVVADLDDYVSLHRECARLRQEHAVLEDAHREAVVSADAYKCAFEEQLRKNSTRLLGGTGGAGRDALRELVNTLGEKLKDKTEALAHQKVAARMLAKRIYELEDAVGTLRQKLESKELEERRIRTESRLSQNSDGETSDGD* # PASA_UPDATE: g5220.t1, single gene model update, valid-1, status:[pasa:asmbl_500,status:3], valid-1 NODE_1130_length_13722_cov_41.385 . gene 10124 12406 . - . ID=g5220;Name=g5220.t1 NODE_1130_length_13722_cov_41.385 . mRNA 10124 12406 . - . ID=g5220.t1;Parent=g5220;Name=g5220.t1 NODE_1130_length_13722_cov_41.385 . five_prime_UTR 12298 12406 . - . ID=g5220.t1.utr5p1;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . exon 11787 12406 . - . ID=g5220.t1.exon1;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . CDS 11787 12297 . - 0 ID=cds.g5220.t1;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . exon 11450 11534 . - . ID=g5220.t1.exon2;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . CDS 11450 11534 . - 2 ID=cds.g5220.t1;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . exon 10124 11151 . - . ID=g5220.t1.exon3;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . CDS 10413 11151 . - 1 ID=cds.g5220.t1;Parent=g5220.t1 NODE_1130_length_13722_cov_41.385 . three_prime_UTR 10124 10412 . - . ID=g5220.t1.utr3p1;Parent=g5220.t1 #PROT g5220.t1 g5220 MLALVRACVPARALAHAAPSLCMRTSTPAQASLLHASGRSHAASAQYATRARLSEDYVRERNARALKRIEPILGKRGILGVMNDEQRASALRRSLLKREDHVPAPENLSPLSSPVLGTRAVRILKEQLPTNVASTSEQLFEKCNLRLHGCDRDTLDAFCFFVKRLADDMQIPNGGIAHLPRRITKLVLLRSPHGNKKSRDTFLRFTHVRAIKFYNMTQRTADLFLSTVQSHLPAMCSLRALEFSYERLPENIVSGASDWVTFADVDAYFAKNPVAKEMAVLPEAQRPHVRTTTDFISPMRPPLHARLPEWPAPFDPTKGPYIEHDAELEQFQEAQAQAQSMEGLDAEEDLDPELEERLRAILGDDSPALGEATRAAGGAAAEGSAPAGAAGVEGGAEEAKPKPPQQHGRRESRFQKFGGQRRAPDANKGKNDKRGAAFKKMEDD* # ORIGINAL: g5219.t1 original gene structure, not modified by PASA NODE_1130_length_13722_cov_41.385 AUGUSTUS gene 2770 8970 . + . ID=g5219;Name=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS mRNA 2770 8970 . + . ID=g5219.t1;Parent=g5219;Name=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 2770 3033 . + . ID=g5219.t1.exon1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 2770 3033 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 3163 3321 . + . ID=g5219.t1.exon2;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 3163 3321 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 3440 3515 . + . ID=g5219.t1.exon3;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 3440 3515 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 3723 3821 . + . ID=g5219.t1.exon4;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 3723 3821 . + 2 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 4051 4139 . + . ID=g5219.t1.exon5;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 4051 4139 . + 2 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 4311 4403 . + . ID=g5219.t1.exon6;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 4311 4403 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 4730 4867 . + . ID=g5219.t1.exon7;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 4730 4867 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 4991 5047 . + . ID=g5219.t1.exon8;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 4991 5047 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 5277 5428 . + . ID=g5219.t1.exon9;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 5277 5428 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 5636 5788 . + . ID=g5219.t1.exon10;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 5636 5788 . + 1 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 6026 7007 . + . ID=g5219.t1.exon11;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 6026 7007 . + 1 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 7161 8635 . + . ID=g5219.t1.exon12;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 7161 8635 . + 0 ID=cds.g5219.t1;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS exon 8865 8970 . + . ID=g5219.t1.exon13;Parent=g5219.t1 NODE_1130_length_13722_cov_41.385 AUGUSTUS CDS 8865 8970 . + 1 ID=cds.g5219.t1;Parent=g5219.t1 #PROT g5219.t1 g5219 MEDEAGQYLAPRARSANDAVSPAQSQNLTVVATAISPSTMKPSRARSKKGKGGTAGADAGSKAPSIVTAQFLQQLMAAVSEHNVDAMSDLLKAAKGIDIVNMVVDKSSGTRLVHAVSENGGASLMRFVLDAGGNVEITDHRGHTPLSRAAVKGNVATMEVLLAGPKVADLASTDKHDRTALHLAAQEGQTAAVRYLIEKGASLTITDMYDNCAIACADNRLKQIEKDEKAPQQTQGKRPSKQSLLDTMWELAQGPKVPLVDVFGNVRSKCARMHLIGKLGIDRLLIEMRKESADNTVMETLLSAVRDYVTTAGQEKTSGKPRHSKQKCVVRLSRDYYLWVLDYVLSEDTPSHLVKSWMRILRMSSSQTHGAETLDRLLRLIQRYGMMLLYNIEWEVGSRSKFPVLIDLYTTLLQIGKENGHGIVRSRHQCVLHEFWAQVENCLALIKNKTTVDAVDRFAQLIKGYYAWCQFFDRCRQREALILLKNAKSLEETVNAQRANADFLAGGAGARSLLWSVLFDTHADVTAGDLSSSSGDGGPLLSIEAAQSAIELAGNEERRVFGAAMSFLDKARGVLGPCSREHAEFLSCLEKFWSGTFTAMQATKGVTQLLAHSQPELLRLFVDFLPREAASHAVSVASGLGVAVMSRQQQKLLQQQLTKQQQQQQQQQQATPDRDSQTSDDFVDFARRFSGAIRVFVDNEAEFLSNAEFLLSVEGVVSTEQKILWIVWEIQRSGSAEFELNISRDNALEFAMQQIVSARPHQLQHDIEINFAEEEGVGSGPTKEFFTIIMKALFGPDSRFFSPTPDGTTFVIRRPEPPKPAPRVSIPGDASSVDMTNGIDSGAGASALGAKGKGKLEHADEQSQGQDNTQPQAKDEASAARRQGRRRRGGKGRAHAADHADSREEASGAGPSSAQADQSPVLVSASVEGGAVDSAADASSSVEVTLQPASEEAVSTGSTAPADVPGPAHPNPRLGPRYPAPTQSQPRKGGRGRSKGGKDTTHVQSSHHAAVDEEMVQYMTMAGRVIGMAVVHEIPIGVKFPAAYLKHLLDQRVTWEDCASIDSSFFTGIKAVLEMRPVAEGLTFVVSDSRGNELELRANGSEIEVTDENKEEFVSLAGLDKIFGGVRPLLKALRDGFWDVIPRRFLRYLSVAELNELLAGPATVDVAEWRSAVDYVDIDEDADQVEWFWKYVAGLDDDMKRALLMFWSSCESPPVHGFGRAREDEDRWMLELINVGSEMLPTSNTCYLTLKMPAYPSYDVLKQRFDAALKVKDLCHAPLV* # PASA_UPDATE: g5218.t1, single gene model update, valid-1, status:[pasa:asmbl_499,status:12], valid-1 NODE_1130_length_13722_cov_41.385 . gene 281 2177 . - . ID=g5218;Name=g5218.t1 NODE_1130_length_13722_cov_41.385 . mRNA 281 2177 . - . ID=g5218.t1;Parent=g5218;Name=g5218.t1 NODE_1130_length_13722_cov_41.385 . five_prime_UTR 2041 2177 . - . ID=g5218.t1.utr5p1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 2035 2177 . - . ID=g5218.t1.exon1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 2035 2040 . - 0 ID=cds.g5218.t1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 1854 1945 . - . ID=g5218.t1.exon2;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 1854 1945 . - 0 ID=cds.g5218.t1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 1676 1741 . - . ID=g5218.t1.exon3;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 1676 1741 . - 1 ID=cds.g5218.t1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 1040 1547 . - . ID=g5218.t1.exon4;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 1040 1547 . - 1 ID=cds.g5218.t1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 724 864 . - . ID=g5218.t1.exon5;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 724 864 . - 0 ID=cds.g5218.t1;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . exon 281 418 . - . ID=g5218.t1.exon6;Parent=g5218.t1 NODE_1130_length_13722_cov_41.385 . CDS 281 418 . - 0 ID=cds.g5218.t1;Parent=g5218.t1;3_prime_partial=true #PROT g5218.t1 g5218 MKGVFDVSSKKLGEGPVTFAWQRSQGNYLAACGVNRMVFIFDRHGDLISEIALQGPCMGMDWDKDGDVLAVIQDKSAAVYLWDAYTKRSTMLDSGMKDLTFCRWSATEPLLAIGTAKGNLLIYNRSTSKKVPILGKHTKRIDCGAWNSRGNLVLGSEDKSFTISNGDGDTLAQPQVRAEPELIQFAERGQSGERSNIVSMSLGKKSLYLYNPDEPDSPIELQFQARYGNIVSYRWYGDGYVMIGFSNGFLVVISTSIDEIGQELYQSRNHKDYLSDIAISTAINKAASIGDNCVKIHDLSDMKDIYNIIQLDDDRGN # PASA_UPDATE: g5221.t1, single gene model update, valid-1, status:[pasa:asmbl_501,status:3], valid-1 NODE_1130_length_13722_cov_41.385 . gene 12641 13713 . + . ID=g5221;Name=g5221.t1 NODE_1130_length_13722_cov_41.385 . mRNA 12641 13713 . + . ID=g5221.t1;Parent=g5221;Name=g5221.t1 NODE_1130_length_13722_cov_41.385 . five_prime_UTR 12641 12707 . + . ID=g5221.t1.utr5p1;Parent=g5221.t1 NODE_1130_length_13722_cov_41.385 . exon 12641 13713 . + . ID=g5221.t1.exon1;Parent=g5221.t1 NODE_1130_length_13722_cov_41.385 . CDS 12708 13346 . + 0 ID=cds.g5221.t1;Parent=g5221.t1 NODE_1130_length_13722_cov_41.385 . three_prime_UTR 13347 13713 . + . ID=g5221.t1.utr3p1;Parent=g5221.t1 #PROT g5221.t1 g5221 MRSSIGRLAHWAARTWTHPPAATQTAAPSSSVVQRVTIDLSPAIQNAWRSHVLSSGTAVSSVVRPSAPFAALGIFGSPLLSNVAHYMSSVAEFFGFDMRRGNNNGRLGDNAVVASADGAALPLDVDAAEDAWSLENDDGRLYLQAPKKRTSHARSRKRMTGKYMKPKHVLTCHVCGGDKLPHRLCAACYNKTKDEALLVIRERVASVYKKDE* # ORIGINAL: g1046.t1 original gene structure, not modified by PASA NODE_3240_length_3932_cov_82.1735 AUGUSTUS gene 816 3866 . + . ID=g1046;Name=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS mRNA 816 3866 . + . ID=g1046.t1;Parent=g1046;Name=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 816 932 . + . ID=g1046.t1.exon1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 816 932 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 1173 1303 . + . ID=g1046.t1.exon2;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 1173 1303 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 1491 1637 . + . ID=g1046.t1.exon3;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 1491 1637 . + 1 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 1927 2287 . + . ID=g1046.t1.exon4;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 1927 2287 . + 1 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 2495 2585 . + . ID=g1046.t1.exon5;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 2495 2585 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 2859 3025 . + . ID=g1046.t1.exon6;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 2859 3025 . + 2 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 3188 3286 . + . ID=g1046.t1.exon7;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 3188 3286 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 3570 3695 . + . ID=g1046.t1.exon8;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 3570 3695 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS exon 3861 3866 . + . ID=g1046.t1.exon9;Parent=g1046.t1 NODE_3240_length_3932_cov_82.1735 AUGUSTUS CDS 3861 3866 . + 0 ID=cds.g1046.t1;Parent=g1046.t1 #PROT g1046.t1 g1046 MSGRSALSGASSSSASSRLANGIRERFVRLKHAIVKPPPPPPEFRKVYANDEIGNAQFSNNLVINSKYTVYNFLFHNIYEQFGRFMNQYFLFIAILQLFPTLTPVSPVTTWTPLIIIFAVSAIKEGYDDYRRHKADAIANSKTYSVIHDGRKRMMQAWEIQCGDIIYLEGNEEFPCDMVLLKSSNADGSCYVQTANVDGETDLKSRISLAATQAISEESFLAFSACVVCRSPNAEIYKFDSRLHLERDSAESEALSLGTSQFLLQGTFLRNTDFVYGLAVYTGNETKLGLNKATPPFKWTRLDQQVNRASSFIFLLQLTVAVILGIVGNVRKSDDDKKWYLGYEHSKWIDALVIPLRFLLLLSLMIPISLKVTMDICKYLYAMFIDWDLNMYDKKTDTPANATSTALSEDLGQN* # ORIGINAL: g11368.t1 original gene structure, not modified by PASA NODE_1583_length_10359_cov_38.5477 AUGUSTUS gene 6953 7888 . - . ID=g11368;Name=g11368.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS mRNA 6953 7888 . - . ID=g11368.t1;Parent=g11368;Name=g11368.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 6953 7888 . - . ID=g11368.t1.exon1;Parent=g11368.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 6953 7888 . - 0 ID=cds.g11368.t1;Parent=g11368.t1 #PROT g11368.t1 g11368 MGQACIGRPAPQPPPQPPRHTPSPPPPPHPRPDERDENDFPGFVDAIFHLSLRDVEMTRVSIAHTAPVFTHIQTYVRESIVPAHATSGCRGRDGGSDLTTLTVVEVLYVDSPALQASYLAQREIVRRHLRAGEQPETDSWDPNTLSQSTRTFMGSLRPHLGRQFQFDSAVPQQRIAVNEAMLFHGTDRVTAMKIAKSGFEERFTERTLFGRGIYFTDQFCKANQYATPDDSDDNAKWVVLARVVLGHAFCAPGSTPDLTQPPPRRDGLTPFHSVVGRFLDPGTPLRHTEYVSYHASNGRAYPMFLVKYRSD* # ORIGINAL: g11367.t1 original gene structure, not modified by PASA NODE_1583_length_10359_cov_38.5477 AUGUSTUS gene 1480 5953 . + . ID=g11367;Name=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS mRNA 1480 5953 . + . ID=g11367.t1;Parent=g11367;Name=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 1480 1562 . + . ID=g11367.t1.exon1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 1480 1562 . + 0 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 2305 2461 . + . ID=g11367.t1.exon2;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 2305 2461 . + 1 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 2838 2930 . + . ID=g11367.t1.exon3;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 2838 2930 . + 0 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 3250 3387 . + . ID=g11367.t1.exon4;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 3250 3387 . + 0 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 3689 3747 . + . ID=g11367.t1.exon5;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 3689 3747 . + 0 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 4047 4309 . + . ID=g11367.t1.exon6;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 4047 4309 . + 1 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 4678 5090 . + . ID=g11367.t1.exon7;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 4678 5090 . + 2 ID=cds.g11367.t1;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS exon 5468 5953 . + . ID=g11367.t1.exon8;Parent=g11367.t1 NODE_1583_length_10359_cov_38.5477 AUGUSTUS CDS 5468 5953 . + 0 ID=cds.g11367.t1;Parent=g11367.t1 #PROT g11367.t1 g11367 MASRGGHHVTKNRLIAIDGDTDCGIRYSAQEGYGVHTDDEPYLRDGNGTKIAQASRIRVLTFNFYVDSRDYDDETASLWEVRFFRNNGTKDHFLSIPQRDGSAYCQNDRSQSDFVHCSLGPPLRGYRIIVVMRRVTPMAYARAEIDAGKPIPPPGDKYVLGMCSLQMTPTVRRDDVGACEPVVNGSTGGTPLRPALKTKKPRGDKRETLEQKKEKMSIRRGVHCGIPSAHLELLRSFGIGYCTSCAMACGGACGVRYFGPVTSRVGQTFDSIKTLFDGRIICRGDFETCIAGNREQGCSSLRLVLPRKCGSVSVDVSSNSPCSERSVASGDEVGTDASRAGAVDASADASGGEGAADDDGDAYFDNSIVRDVDGQITEIVVIGRGGRLRGKATESYAFVGSQPLRQNYPLFLNAELGIPTRIAARPCNTKAYTYIGLFVVDSVRYEDSDITATGPLGYPLPVKVFKARLVPFRPRLITSDASEAVRALLASANPSACALSRGSRRTDRDKLGRDCATQANSTISETVSAAETRQAAEDDDSVWTAERWNEKMQAGTALLRGEF* # ORIGINAL: g7782.t1 original gene structure, not modified by PASA NODE_1422_length_11447_cov_39.332 AUGUSTUS gene 156 2554 . - . ID=g7782;Name=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS mRNA 156 2554 . - . ID=g7782.t1;Parent=g7782;Name=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 2488 2554 . - . ID=g7782.t1.exon1;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 2488 2554 . - 0 ID=cds.g7782.t1;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 1730 1894 . - . ID=g7782.t1.exon2;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 1730 1894 . - 2 ID=cds.g7782.t1;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 710 1367 . - . ID=g7782.t1.exon3;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 710 1367 . - 2 ID=cds.g7782.t1;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 156 298 . - . ID=g7782.t1.exon4;Parent=g7782.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 156 298 . - 1 ID=cds.g7782.t1;Parent=g7782.t1 #PROT g7782.t1 g7782 MRAVLVVALVYILFGRNAAAVQTLRVTEAALQKYAYMSAEDGVAGAAAVFQPFAEPLYRGAFRGSLASLGGFASDASPFRMPDISTDGTLKGACSDDLSFNLYQFASDIIPGPPIPYRLNVGFTSQSNLSTSFRAFIVLAPLATAATAPRYFVAGCDSPNSNYSVPFSVGARQYVNATVGGVCVPTVADFSALLRGDRDAFVVRAPPVQMSARVKYLISVRVEGQRVAMVVSAPDAALSPSTARRLASLAADLPIPANATQPDFFPFAFGLAAGLAKDNATTCLSDFSMTALGSVEGYYSESAYVGYDSVFVDTFESPNATVQDGSAVPMSELWIPWFTGDDAD # ORIGINAL: g7783.t1 original gene structure, not modified by PASA NODE_1422_length_11447_cov_39.332 AUGUSTUS gene 5070 11229 . - . ID=g7783;Name=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS mRNA 5070 11229 . - . ID=g7783.t1;Parent=g7783;Name=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 10758 11229 . - . ID=g7783.t1.exon1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 10758 11229 . - 0 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 10092 10541 . - . ID=g7783.t1.exon2;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 10092 10541 . - 2 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 9617 9832 . - . ID=g7783.t1.exon3;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 9617 9832 . - 2 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 8986 9416 . - . ID=g7783.t1.exon4;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 8986 9416 . - 2 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 8331 8633 . - . ID=g7783.t1.exon5;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 8331 8633 . - 0 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 7834 8026 . - . ID=g7783.t1.exon6;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 7834 8026 . - 0 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 7417 7591 . - . ID=g7783.t1.exon7;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 7417 7591 . - 2 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 6502 7206 . - . ID=g7783.t1.exon8;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 6502 7206 . - 1 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 5955 6179 . - . ID=g7783.t1.exon9;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 5955 6179 . - 1 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 5661 5721 . - . ID=g7783.t1.exon10;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 5661 5721 . - 1 ID=cds.g7783.t1;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS exon 5070 5315 . - . ID=g7783.t1.exon11;Parent=g7783.t1 NODE_1422_length_11447_cov_39.332 AUGUSTUS CDS 5070 5315 . - 0 ID=cds.g7783.t1;Parent=g7783.t1 #PROT g7783.t1 g7783 MWKPTLRPPLVTCGTRSHSTVLCNSVLQGQWRGFALDADGQTEVPTSLRMWSVNGSALTHNSHIATSFAYEPAQATLFCTETNVPGMYWVDIVGAPFGKVTPRIYKATIMTRTTTAGQEATVVMVRLDRNANCSAFPAVTATPTTIPPIVSVTRLRSSSNLTCAYSSVNTSCSADAICSTLGDAYKGAGCPTVLTTGRYNGALQMKSSASTSAVASIQFDFRASVPSRAIGFLMTDKTNAFSSIFLSCDPKANSYSMYIQNEIGMFNPMRLRFSVDDFGSMKTLLVGYPGSCSDPTEGDNLCSATLTRIPVCEVENAAVKATSAAALQSYVLCDGMDSLDLTGYTGPIPPLKVSNIVKSLTIVGSSIPNLLSLSNLQRIGDTLTLARNSALVSLSDLSSLVSIGGSCVINGAHPALRSIDGPSKLQSIGGDLIMDQLAGPATLSGLAQLRTVGGGVTIVLTSLEDVSDLALASTGSRFVIADNSVLRRFLSATAMRQASPTAVYNGYTFKNNPQACVPSEMLTFITIPNALPPVLPDISNNAPANGSLCLTSSVSFIPIVAGDATVTTTVTTSIATVLNRTDWQASDPALVADAATTLVQKLLEVVQTARGAADAGLTNVLSADVNKNIIDSIDGVLSPATLGVMRASKASNTLDSVLTTFGFANSASSPCGSTGSYSGSRVFLRSIKETPTNMAGNISFTDTAGETSSFVVPTGLDQVVDSGCLTASFSVISANPFVPAENGTSLRPYSDIITMKFENVTLSNLPASKSFVFSASIKNDTGGVAICGFWNESSVSWESSGCTTVSRDGRRVTCRCNHLTSFGVLFDAREASIPSADEKALSYLTYIGCSLSIAGCVLTILTFAALPRLRTVPTILVMNLCAALISVNVIYLAGIDRTSNTAGCKAVAILLQYALLCAFSWMGIVGFNVWRNVVVVKMGDAVTSLSWKHYTVGWGAPAVFVAVCVIVDAAKKNAIEYGDDQRCWISTRGGLIGAFLVPVSLIIIANIVVFALAVRSLRRAAQQRSSSMARAGTPDFMKDLLIYLSLLAILGCTWAFGYLGMIHYAFWYPFVILNCFQGVFIFCAYVLRARVYSAWYERLSTSFSSSGFFATSSGDMLNSGKGESSSANYSRSHAHSGTVEMTSVARLRSDSGDSISDI* # ORIGINAL: g1959.t1 original gene structure, not modified by PASA NODE_3656_length_3016_cov_26.5937_potentialcontaminant AUGUSTUS gene 598 1107 . + . ID=g1959;Name=g1959.t1 NODE_3656_length_3016_cov_26.5937_potentialcontaminant AUGUSTUS mRNA 598 1107 . + . ID=g1959.t1;Parent=g1959;Name=g1959.t1 NODE_3656_length_3016_cov_26.5937_potentialcontaminant AUGUSTUS exon 598 1107 . + . ID=g1959.t1.exon1;Parent=g1959.t1 NODE_3656_length_3016_cov_26.5937_potentialcontaminant AUGUSTUS CDS 598 1107 . + 0 ID=cds.g1959.t1;Parent=g1959.t1 #PROT g1959.t1 g1959 MANDEAATLTLMQNKLANETWTKDSHKGEVDLEAEVGQACEAVEASEAVEASEAGEVSEAVKVSETVEASEAVKVSETVEASEAAEAAEAVEGGAAYFNRLIGTFPQDTSISRTRVANRVRHSFDDFDFRNEDSEDSEDENFEYNVDEDDMPGFPSSLREYLLTNQRIV* # PASA_UPDATE: g13709.t1, single gene model update, valid-1, status:[pasa:asmbl_6112,status:12], valid-1 NODE_3481_length_3368_cov_37.8961 . gene 468 2698 . + . ID=g13709;Name=g13709.t1 NODE_3481_length_3368_cov_37.8961 . mRNA 468 2698 . + . ID=g13709.t1;Parent=g13709;Name=g13709.t1 NODE_3481_length_3368_cov_37.8961 . exon 468 1281 . + . ID=g13709.t1.exon1;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . CDS 468 1281 . + 0 ID=cds.g13709.t1;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . exon 1410 1726 . + . ID=g13709.t1.exon2;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . CDS 1410 1726 . + 2 ID=cds.g13709.t1;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . exon 1881 2698 . + . ID=g13709.t1.exon3;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . CDS 1881 2498 . + 0 ID=cds.g13709.t1;Parent=g13709.t1 NODE_3481_length_3368_cov_37.8961 . three_prime_UTR 2499 2698 . + . ID=g13709.t1.utr3p1;Parent=g13709.t1 #PROT g13709.t1 g13709 MKYTPRRETQGRGPSKSADSGKENHSKNSSNNNNITKNNGVVVQRPAVASRNGITPSQRAFIQIVAGLLLMSASLYGLSILQLIGKNDGNKAADSVHASVGDSILSSTDAPHGRGWPAATPTPDVPAYMQSVTPAPTESDNAGEHAVMDDDSAKSVSIAATQDEYGESARVHVTPDALAPPYRLRAVQRQPWVVGTAYVDVAKGAAEPRIFTGTVADTWRARSLWTNEFLCEHIDSVEVHMQARATFMSFHDDRPMEPLLTTLKWADFNAMVNVSSRELYVACADCPYYYYSMRLERLPRTHEWIADVQPLQPVLIDKEGLQINLWMGRKGITTATHYDASYNIFVQLQGRKRFTFFPPSAPMYLHPCLHPHYGHPQVDIKNVTKESFPRFIDSEAVVAELGPGDMLIFPPFWYHHVETLEDSVSVNVWADAPELQLADAATRLSIPLESSWDSETMAAALKILLEPVVARVLPAMNAKSFVQTHLLEQRYHPLYGAGGIQAPRREHSFKECARSSSFLASKGVELHAEAVDSYVQSMGALFDDMGGVSVREICLGNYVEYLADVLFGTDRVYSFLCDCFDQ* # PASA_UPDATE: g5137.t1, single gene model update, valid-1, status:[pasa:asmbl_2163,status:12], valid-1 NODE_1619_length_10157_cov_39.5413 . gene 305 1112 . + . ID=g5137;Name=g5137.t1 NODE_1619_length_10157_cov_39.5413 . mRNA 305 1112 . + . ID=g5137.t1;Parent=g5137;Name=g5137.t1 NODE_1619_length_10157_cov_39.5413 . five_prime_UTR 305 306 . + . ID=g5137.t1.utr5p1;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . exon 305 405 . + . ID=g5137.t1.exon1;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . CDS 307 405 . + 0 ID=cds.g5137.t1;Parent=g5137.t1;5_prime_partial=true NODE_1619_length_10157_cov_39.5413 . exon 644 776 . + . ID=g5137.t1.exon2;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . CDS 644 776 . + 0 ID=cds.g5137.t1;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . exon 960 1112 . + . ID=g5137.t1.exon3;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . CDS 960 1030 . + 2 ID=cds.g5137.t1;Parent=g5137.t1 NODE_1619_length_10157_cov_39.5413 . three_prime_UTR 1031 1112 . + . ID=g5137.t1.utr3p1;Parent=g5137.t1 #PROT g5137.t1 g5137 NFVLWLKKHHPPTDVDSVEDAVKDGVALLVAMEAASQQSAGKFNKSARMPMHCMDNLNVALSFAKKLNVDVAGTTAEDLYNGNVKKYAGFLAALLKEYPL* # ORIGINAL: g5140.t1 original gene structure, not modified by PASA NODE_1619_length_10157_cov_39.5413 AUGUSTUS gene 8228 9784 . - . ID=g5140;Name=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS mRNA 8228 9784 . - . ID=g5140.t1;Parent=g5140;Name=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 9665 9784 . - . ID=g5140.t1.exon1;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 9665 9784 . - 0 ID=cds.g5140.t1;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 9198 9296 . - . ID=g5140.t1.exon2;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 9198 9296 . - 0 ID=cds.g5140.t1;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 8910 8992 . - . ID=g5140.t1.exon3;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 8910 8992 . - 0 ID=cds.g5140.t1;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 8662 8731 . - . ID=g5140.t1.exon4;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 8662 8731 . - 1 ID=cds.g5140.t1;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 8228 8395 . - . ID=g5140.t1.exon5;Parent=g5140.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 8228 8395 . - 0 ID=cds.g5140.t1;Parent=g5140.t1 #PROT g5140.t1 g5140 MPSLHLLCTCTRSGAIVSDVNDPNDTVYNMMLAKYIRSDTFPAEKVRITAAFASSVKASILQKTLAMSIDPAQVKPQDTTAIVTKVARNPIGQPLAWDFMKQNWDLLFANFGSRMGTLVGGVTQDFVTLERAQDVTAFFQAHPAPSANGAISGSLERIRSNAYWLGLHTQATCTYFAGL* # ORIGINAL: g5138.t1 original gene structure, not modified by PASA NODE_1619_length_10157_cov_39.5413 AUGUSTUS gene 3064 4401 . + . ID=g5138;Name=g5138.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS mRNA 3064 4401 . + . ID=g5138.t1;Parent=g5138;Name=g5138.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 3064 4401 . + . ID=g5138.t1.exon1;Parent=g5138.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 3064 4401 . + 0 ID=cds.g5138.t1;Parent=g5138.t1 #PROT g5138.t1 g5138 MAKVAVKPPSPDAALRQPLKSAVQRRRTATMLDAASRAMYANLLATVTNDLEALPMLKHPSMSSALVTPNQSPAADGLSQQQSVSQLQTKHQPSTGSTGSGLTWNMNSFILFSNKYRCMLRQRLPGVPNGALSEVLSHMWSTLSVDQKEEYRIAAKNIRHAHTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQYVPDKSHPSGPTVSQFMPPSSPTSSSGSSAASWSSRDNTLVKPWFPTTEVVSAPPQSLASRAGVHPLPTKTGGQYRSQTATQQSGTDEASSPAGLRAAHADPFMAVTVNVCHNQTADSIRTPGASDDLNERYRECGSPHGCFGNPTMYSVQFANTSSSFNHEALSANEPSLARPTANGDWLPAAWQLPMINCNYVDRAMAGHSEDAGTNTALAMPCVGDWVYWRMKVALV* # ORIGINAL: g5139.t1 original gene structure, not modified by PASA NODE_1619_length_10157_cov_39.5413 AUGUSTUS gene 6148 7785 . + . ID=g5139;Name=g5139.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS mRNA 6148 7785 . + . ID=g5139.t1;Parent=g5139;Name=g5139.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS exon 6148 7785 . + . ID=g5139.t1.exon1;Parent=g5139.t1 NODE_1619_length_10157_cov_39.5413 AUGUSTUS CDS 6148 7785 . + 0 ID=cds.g5139.t1;Parent=g5139.t1 #PROT g5139.t1 g5139 MYRGALRRRLTSANNGTISGMLSSMWGIVTQEKKEEYSAVARAMTIAHNAHVANQLNADKLQDTLQSTTKTTSLACLEVPPGLPTSAQDVSVSDGAPAVVVVPCGDVRDHVVRGVVDIGRESDGLSVIGEQRHEHQWNCPFVPLTKDQSSTPPLSLTSHSSDTSVRLQFCELCNHSCGEESPEKSQVHYFVSGSFDSLIGGRIDIVTAGAMIGMPVPSHWRQPPMAQCAPQPLREVAQEAVNNYIYGSMVRPSVAVAPHSYVEATHDLIARLSGTGRHQPAVLNGPSVIPAHEPETRDLPVKSDLESASVLTAVNCKLMPPYVGVGESARDMDALLPWPQAQCGWDSHHHCIAPPNASDRVYAHDQPWWPTDPLPQSFEPTWPSIPSHTEPNTYNGRDAAGQQFLAAVNVRPAAITAVGEWHLPTLMTAQNDDDFGIHYEDEHPQQALLRREAELQALPVGWPYLHHLPNAAAYVVGHELPSVCAAAVSDNVKSGSESLVGFCTEATPTVSRVQRPPSVLVVDRMDAAALHPDEYSLWQMSVTLL* # PASA_UPDATE: g6580.t1, single gene model update, valid-1, status:[pasa:asmbl_6802,status:12], valid-1 NODE_3992_length_2389_cov_211.201 . gene 242 2378 . + . ID=g6580;Name=g6580.t1 NODE_3992_length_2389_cov_211.201 . mRNA 242 2378 . + . ID=g6580.t1;Parent=g6580;Name=g6580.t1 NODE_3992_length_2389_cov_211.201 . exon 242 507 . + . ID=g6580.t1.exon1;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . CDS 242 507 . + 0 ID=cds.g6580.t1;Parent=g6580.t1;5_prime_partial=true NODE_3992_length_2389_cov_211.201 . exon 760 1000 . + . ID=g6580.t1.exon2;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . CDS 760 1000 . + 1 ID=cds.g6580.t1;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . exon 1329 1557 . + . ID=g6580.t1.exon3;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . CDS 1329 1557 . + 0 ID=cds.g6580.t1;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . exon 1926 2378 . + . ID=g6580.t1.exon4;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . CDS 1926 2371 . + 2 ID=cds.g6580.t1;Parent=g6580.t1 NODE_3992_length_2389_cov_211.201 . three_prime_UTR 2372 2378 . + . ID=g6580.t1.utr3p1;Parent=g6580.t1 #PROT g6580.t1 g6580 NCTQLFCHFRWKGHGMDVLQYLIVNLGGEPNFPLRQAVEAAVREVVKEETDLLREYLQKRGHRLFPYVYTRRPFILEELPENETVSLFRFKSADLHRLAESIGLPEIIRCENRLKVDRLEALCILIWRLAFPGRLFSSIPVFERPIDEISRIVNTTLELLYDTYSHKLATWDQERLTVDYLKRLSAALSEIGVPYEQCIGFVDGTVRGICRPVRGQRLVYNGHKRKHALKYQGVTTPDGLITHLSGPWLGPKPDSAMIAESGLREILASYAFTTDADGQRVPFHLYGDPAYGMHPHLIAPYRGARLTEMEEAHNSVMSASRIAVEWSFGKVINLFAATNYKHQQKLLLQPVAQQYVVAVLLTNCHTCLYGSQINERFRMPPPRLEDYLHTLAS* # ORIGINAL: g8734.t1 original gene structure, not modified by PASA NODE_3376_length_3598_cov_39.7414 AUGUSTUS gene 418 1722 . + . ID=g8734;Name=g8734.t1 NODE_3376_length_3598_cov_39.7414 AUGUSTUS mRNA 418 1722 . + . ID=g8734.t1;Parent=g8734;Name=g8734.t1 NODE_3376_length_3598_cov_39.7414 AUGUSTUS exon 418 1722 . + . ID=g8734.t1.exon1;Parent=g8734.t1 NODE_3376_length_3598_cov_39.7414 AUGUSTUS CDS 418 1722 . + 0 ID=cds.g8734.t1;Parent=g8734.t1 #PROT g8734.t1 g8734 MASFSSLPIELVVSHIVPFLCKKDLASLACVNSRLRCLLKHVRMYSLRYEFSKLYSKCATFRDAVGADIPREQLKLNLKGLQSLRGALSALGGVHSLDLSHCYAVTDVSALGGVHSLVLSGCYNVTDVSALRGVHTLELSRCEGVTDVSALGGVHTLYLSGCYRVTDVSALGGVRSLYLSCCGKVTDVSALGGVRSLTLSSCRGVIDVSALGDVHMLNLSGCESVTDVSALGGVRSLNLSGCYAVTDVSALGGVRSLNLSGCERVRNVSALGGVHTLDLSHCYGVTDVSALGGVYSLNLSYCNRVRDVSALGGVHSLNLTHCNRVRDVSALGGVHSLNLSICLITDVSALGGIHSLNLSYGLVRDVSALGDVHSLNLSKCTGVTDVSGLGGVHELNLSGCDRVTDVSALGRVHTLSLRGFSELRVCLCWVASIP* # ORIGINAL: g5912.t1 original gene structure, not modified by PASA NODE_1295_length_12339_cov_41.7323 AUGUSTUS gene 5263 9084 . + . ID=g5912;Name=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS mRNA 5263 9084 . + . ID=g5912.t1;Parent=g5912;Name=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS exon 5263 6658 . + . ID=g5912.t1.exon1;Parent=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS CDS 5263 6658 . + 0 ID=cds.g5912.t1;Parent=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS exon 7020 7599 . + . ID=g5912.t1.exon2;Parent=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS CDS 7020 7599 . + 2 ID=cds.g5912.t1;Parent=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS exon 7800 9084 . + . ID=g5912.t1.exon3;Parent=g5912.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS CDS 7800 9084 . + 1 ID=cds.g5912.t1;Parent=g5912.t1 #PROT g5912.t1 g5912 MAEEQRRLDEDAARAKNWKRWGPYLSERQWATVREDYSHDGNAWEHLPFSRANATAYRWGEDGLLGFTDRECRLCFGLSLWNGRDSILKERLFGLTNEQGNHGEDVKEAYFYADSTPTHSYFRSVYKYPHSKPFPYQRLVDENARRSRVEPEFELQDAGAFDHSNYFDVVAEYAKADDNDICMRISISNRSHDTSSSLVLLPTLWFRNTWSWGCADESCWTKPTIRLHGNGVRTTHETLEAFVMEIIDDGQPDTPVEWLFTENSTNLRRLYGVDNETDYTKDAFDRYVVHGEKDAVRPQPRGTKAAPLLRWTAIAPGQTVVVKLRLRRDGANEEPTLSETHTDHTPHVHGDGAASTTQSHVSAAAVDTSDMKREFDSVVAVRMHECDAFYKKRIVQTLTEDEQNVCRQAYAGLLFSKQYYHYIVREWLAGDPNFPPPPSERNSGRNSDWSHFHARDIILMPDKWEYPWPAVWDLAFQVVAIAPIDADFAKSQLSLFLREWYMHPNGCLPAYEWNFGDVNPPVHAWAVWSVYRLTASAAPRDARDGQSGSTLRGDTDWLARCFQKLVINFTWWVNRKDPDGHHIFAGGFLGLDNIGVFDRSKPLPSGLHYEQADGTAWMAFYCIIMLKIALELAQTDRSYEDLASKFFEHYVAVADAMNSIGGSGLWNDADSFYYDKLRPEHSCHGDTLRVRSMVGIIPLFAVGNIPSSKIVSLDGFSKRMRWFMKNRKDLAAQVAMMEVQPRTPHEHHGHSKQQRPHDARHTHTRAPSRGDEAGARGTASPEHAQAHAHAHDHSASHRRKEGEDYIYHLAIPSADRLSKVLRYVLSENEFLSDYGVRSLSKFHASHPYTYGDASVAYVPGESDTGMFGGNSNWRGPIWLPVNYLLIESLEHFHHFYGNDMKCEYPTGSGKMCTLGDVAVGLAERLSRIFLRDPASGNRPCNGGDALFARDPHWRDHVLFHEYFHGDSGRGLGATHQTGWTALAATCLNIIGRHRLRQQLSSQPWYIGRASEEEAESCVSAASGGFVVRATATPGVLAVCVRGETDGAFRHAHVVDGPQGYSMCGCEMAYDTIENVARAMLGKWERE* # ORIGINAL: g5911.t1 original gene structure, not modified by PASA NODE_1295_length_12339_cov_41.7323 AUGUSTUS gene 2499 3082 . + . ID=g5911;Name=g5911.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS mRNA 2499 3082 . + . ID=g5911.t1;Parent=g5911;Name=g5911.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS exon 2499 2829 . + . ID=g5911.t1.exon1;Parent=g5911.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS CDS 2499 2829 . + 0 ID=cds.g5911.t1;Parent=g5911.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS exon 3048 3082 . + . ID=g5911.t1.exon2;Parent=g5911.t1 NODE_1295_length_12339_cov_41.7323 AUGUSTUS CDS 3048 3082 . + 2 ID=cds.g5911.t1;Parent=g5911.t1 #PROT g5911.t1 g5911 MSAVNFDSVPIEVFMSHVVPLLKEPELAALSKVNRVLRFHLLPRRLFQLWPLYNNMFLNDAAFREEVTLALPRNRLVLTSLKNVKDLRPFEGVHTAVLIEPLCTDLCTLAAPPCTPADSHG* # PASA_UPDATE: g5910.t1, single gene model update, valid-1, status:[pasa:asmbl_1116,status:12],[pasa:asmbl_1118,status:12], valid-1 NODE_1295_length_12339_cov_41.7323 . gene 153 1691 . + . ID=g5910;Name=g5910.t1 NODE_1295_length_12339_cov_41.7323 . mRNA 153 1691 . + . ID=g5910.t1;Parent=g5910;Name=g5910.t1 NODE_1295_length_12339_cov_41.7323 . five_prime_UTR 153 153 . + . ID=g5910.t1.utr5p1;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . exon 153 489 . + . ID=g5910.t1.exon1;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . CDS 154 489 . + 0 ID=cds.g5910.t1;Parent=g5910.t1;5_prime_partial=true NODE_1295_length_12339_cov_41.7323 . exon 650 772 . + . ID=g5910.t1.exon2;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . CDS 650 772 . + 0 ID=cds.g5910.t1;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . exon 909 1691 . + . ID=g5910.t1.exon3;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . CDS 909 1235 . + 0 ID=cds.g5910.t1;Parent=g5910.t1 NODE_1295_length_12339_cov_41.7323 . three_prime_UTR 1236 1691 . + . ID=g5910.t1.utr3p1;Parent=g5910.t1 #PROT g5910.t1 g5910 LYKARTYVKKVIAAFKDVKTDPAYGRNRAWPAPPRVLIDFKNKAERIQKCWRAKMMISKLSPEQRQDLRTKSLACAVFSGKKKDWGLVRKWEGNYLGQDAKFRQAVQGYMTKDGDREVVFSELVVKLNRKGKAQDRCVAVTEKRIYKLDPSFKLCKAPIPLSSVTAVSVGPGKDQGVVVHCGGKEGDLIVDLSVRGPKAAELAAKIVEAGKKAGRKIDMRVSERISYTQAGKSGELTFAEESVSTFTFKRAGKGIALVSPR* # PASA_UPDATE: g5913.t1, single gene model update, valid-1, status:[pasa:asmbl_1120,status:12], valid-1 NODE_1295_length_12339_cov_41.7323 . gene 11025 12244 . + . ID=g5913;Name=g5913.t1 NODE_1295_length_12339_cov_41.7323 . mRNA 11025 12244 . + . ID=g5913.t1;Parent=g5913;Name=g5913.t1 NODE_1295_length_12339_cov_41.7323 . five_prime_UTR 11025 11156 . + . ID=g5913.t1.utr5p1;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . exon 11025 11210 . + . ID=g5913.t1.exon1;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . CDS 11157 11210 . + 0 ID=cds.g5913.t1;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . exon 11623 11865 . + . ID=g5913.t1.exon2;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . CDS 11623 11865 . + 0 ID=cds.g5913.t1;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . exon 12108 12244 . + . ID=g5913.t1.exon3;Parent=g5913.t1 NODE_1295_length_12339_cov_41.7323 . CDS 12108 12244 . + 0 ID=cds.g5913.t1;Parent=g5913.t1;3_prime_partial=true #PROT g5913.t1 g5913 MADVLQFDKATHFVKGSMAPGVLKANERGFAFKPRESGDKIVSVEASDVTDATWIKGAGGSELKLSLRAGGSARFGGFRESDKENVRSFLQEKLKKDLKETDLAVKGWNFGRIAVNDGTLTFLVDDKPSFEVPLSELAQPVLAN # ORIGINAL: g2728.t1 original gene structure, not modified by PASA NODE_14997_length_245_cov_1.23529_potentialcontaminant AUGUSTUS gene 93 199 . - . ID=g2728;Name=g2728.t1 NODE_14997_length_245_cov_1.23529_potentialcontaminant AUGUSTUS mRNA 93 199 . - . ID=g2728.t1;Parent=g2728;Name=g2728.t1 NODE_14997_length_245_cov_1.23529_potentialcontaminant AUGUSTUS exon 93 199 . - . ID=g2728.t1.exon1;Parent=g2728.t1 NODE_14997_length_245_cov_1.23529_potentialcontaminant AUGUSTUS CDS 93 199 . - 0 ID=cds.g2728.t1;Parent=g2728.t1 #PROT g2728.t1 g2728 MIGDRLRMLLAGDLHNYSRYERQDGNLQLVVCGGG # ORIGINAL: g10778.t1 original gene structure, not modified by PASA NODE_1671_length_9867_cov_41.6513 AUGUSTUS gene 2019 4902 . - . ID=g10778;Name=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS mRNA 2019 4902 . - . ID=g10778.t1;Parent=g10778;Name=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 4785 4902 . - . ID=g10778.t1.exon1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 4785 4902 . - 0 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 4360 4541 . - . ID=g10778.t1.exon2;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 4360 4541 . - 2 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 4012 4042 . - . ID=g10778.t1.exon3;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 4012 4042 . - 0 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 3579 3726 . - . ID=g10778.t1.exon4;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 3579 3726 . - 2 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 3203 3332 . - . ID=g10778.t1.exon5;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 3203 3332 . - 1 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 2700 2853 . - . ID=g10778.t1.exon6;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 2700 2853 . - 0 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 2511 2569 . - . ID=g10778.t1.exon7;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 2511 2569 . - 2 ID=cds.g10778.t1;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 2019 2153 . - . ID=g10778.t1.exon8;Parent=g10778.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 2019 2153 . - 0 ID=cds.g10778.t1;Parent=g10778.t1 #PROT g10778.t1 g10778 MGKEKVEKDKTASSRSAQIDNDLEKDWKTQSREIKLLTLGAGDSGKSTFVKQLKILHDKGFNEDDRKVFKGVIYDNIIESTATLVKSLPKLDLELPENLKEYGDVITKYRDCILPPSFYDNLDRISQPNFIPTVEDVLRFRVPTTGVHETRISINNNPFRVIDVGGQRSERRKWIHCFEDVTAVVFFVSASGYDQVLFEDYNKNRLIESLELFGEVVNNKYFEKTAYILFLNKRDLFEQKIIRTPLSVCFQDYKGAPGEPLPALNYIREKFFEQDKRKDRKLLYCHFTCATDTNNMKHVVEDTAKIIIEVNLRKAGLA* # PASA_UPDATE: g10779.t1, single gene model update, valid-1, status:[pasa:asmbl_2297,status:3], valid-1 NODE_1671_length_9867_cov_41.6513 . gene 5590 8635 . + . ID=g10779;Name=g10779.t1 NODE_1671_length_9867_cov_41.6513 . mRNA 5590 8635 . + . ID=g10779.t1;Parent=g10779;Name=g10779.t1 NODE_1671_length_9867_cov_41.6513 . five_prime_UTR 5590 5882 . + . ID=g10779.t1.utr5p1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . exon 5590 6313 . + . ID=g10779.t1.exon1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . CDS 5883 6313 . + 0 ID=cds.g10779.t1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . exon 6584 7336 . + . ID=g10779.t1.exon2;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . CDS 6584 7336 . + 1 ID=cds.g10779.t1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . exon 7520 7884 . + . ID=g10779.t1.exon3;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . CDS 7520 7884 . + 1 ID=cds.g10779.t1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . exon 8054 8635 . + . ID=g10779.t1.exon4;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . CDS 8054 8361 . + 2 ID=cds.g10779.t1;Parent=g10779.t1 NODE_1671_length_9867_cov_41.6513 . three_prime_UTR 8362 8635 . + . ID=g10779.t1.utr3p1;Parent=g10779.t1 #PROT g10779.t1 g10779 MSLFSTPMFSVRSIFYKPRKGDERPLSVFYHSDEELRSIVAALDSFDGLRDPERCRGLIERLRVTQQALLNSIEQMMVEAGDRRACREYRLKFPDDVQDELRGFYGPLWFGAECLAGGSIIEGRPEISRSLAKLASPLCEVLNRLREVARAQALKNPGCYPPTLRQLLAEFDRLWTNFEFTYVRSFIPVKSTTDYDDQQDISVLFSEALSGLLHDGLIDQDMIDDYEPALMIALPRLAVAHLVSNGRYAVPTAEEVTRDKESETAASASGGGSNTRNGAPAAPRFTFLSASDSTAVERQQREVILQLEGGSGGSAAISQFMPLSRDRCCYVLQPFREEIARAKGLVSGLGDSDIVSLKVRLLGDAVDTEFEDPADADTPAKITEAFVLIAAIGDRIQGGDHARDVGHVLKTVFRMYEMQPNVQGATLLALGSSPPRMSQLLAHSDALAAELALAMREEAMAQEAAASSTEIESARDAIAHGGSARERAQTELPSSGSMSPPTRATRSQTSVALASKAPAWVPDASCRTCGECKRSFGAVVRRHHCRNCGQIFCAQCAHTFIEIPRYGYDRPVRVCNNCAVGLIEEAKAAQPASLRPSAVGSPVRSNPTQIRLTGTWAQ* # ORIGINAL: g10777.t1 original gene structure, not modified by PASA NODE_1671_length_9867_cov_41.6513 AUGUSTUS gene 518 1552 . + . ID=g10777;Name=g10777.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS mRNA 518 1552 . + . ID=g10777.t1;Parent=g10777;Name=g10777.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 518 1552 . + . ID=g10777.t1.exon1;Parent=g10777.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 518 1552 . + 0 ID=cds.g10777.t1;Parent=g10777.t1 #PROT g10777.t1 g10777 MEQATQPLDLPIAHTDIVSDKCSVASVATQKPPCSMCAECKQRAAAAAARTRALLFRNCDCCNCIKAEMECPSTQHHVDCNNGHKPDTSTRSKLQRKLKVQQLHASTTPHASELPSVSLPASPSPPPADERSIDDLVKFIEEEKIAEKNRSGGRRRQLSHKAVTSLAQTREAVSPAKLPSGDANTTHMQCVDTITAPPPSKGESLPDAAALYDDVGAASTLMMRLAELEKEIQGYAVDIIPPISAAANISQDPSTSSDMHVTTIHATTNYSSSLRQKTPKHAQTLTMRAPLTRTLMDDADFDRRLEEFRAFCSQGVCAPRRKVAIDVRQLLGGARFETRKSIRC* # ORIGINAL: g10780.t1 original gene structure, not modified by PASA NODE_1671_length_9867_cov_41.6513 AUGUSTUS gene 8992 9591 . - . ID=g10780;Name=g10780.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS mRNA 8992 9591 . - . ID=g10780.t1;Parent=g10780;Name=g10780.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS exon 8992 9591 . - . ID=g10780.t1.exon1;Parent=g10780.t1 NODE_1671_length_9867_cov_41.6513 AUGUSTUS CDS 8992 9591 . - 0 ID=cds.g10780.t1;Parent=g10780.t1 #PROT g10780.t1 g10780 MGNISARIIEIFENLFASSKVAGKVLMVGLDGAGKTTILYQLKLGDRINTIPTIGFNVETVELPGVSFCVWDVGGQTKIRPLWQHYFAGSDAIVFVVDSTDAERLLEAKEELAELAASPLLDNACFLILANKQDSPRAHGPRAVMDAIGAENLSTGKLRHRQWLVKGISAATGEGIIEAFHSLAAMMAKQRKIARAGAA* # ORIGINAL: g7405.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 19395 20176 . + . ID=g7405;Name=g7405.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 19395 20176 . + . ID=g7405.t1;Parent=g7405;Name=g7405.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 19395 19416 . + . ID=g7405.t1.exon1;Parent=g7405.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 19395 19416 . + 0 ID=cds.g7405.t1;Parent=g7405.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 19653 20176 . + . ID=g7405.t1.exon2;Parent=g7405.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 19653 20176 . + 2 ID=cds.g7405.t1;Parent=g7405.t1 #PROT g7405.t1 g7405 MSYCKEDGKDRVYFISEEDAAELEKSPPIDLSALGDDDEDDNGGMRGAIKPNGEIDWDCPCLKPMLKEPCGDAFREAFSCFVYSKEDPKGSDCIEQFKTMQKCFSEHPEIYGAQEDDNDAEVDAAVDAAIAEAEAEAEAEAARTADGSATQTTTEASASDAQAATEAIAEPVASGSSSPSS* # PASA_UPDATE: g7406.t1, single gene model update, valid-1, status:[pasa:asmbl_6902,status:3], valid-1 NODE_404_length_24521_cov_42.7219 . gene 20807 21569 . - . ID=g7406;Name=g7406.t1 NODE_404_length_24521_cov_42.7219 . mRNA 20807 21569 . - . ID=g7406.t1;Parent=g7406;Name=g7406.t1 NODE_404_length_24521_cov_42.7219 . five_prime_UTR 21510 21569 . - . ID=g7406.t1.utr5p1;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . exon 21456 21569 . - . ID=g7406.t1.exon1;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . CDS 21456 21509 . - 0 ID=cds.g7406.t1;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . exon 21152 21254 . - . ID=g7406.t1.exon2;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . CDS 21152 21254 . - 0 ID=cds.g7406.t1;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . exon 20807 20979 . - . ID=g7406.t1.exon3;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . CDS 20822 20979 . - 2 ID=cds.g7406.t1;Parent=g7406.t1 NODE_404_length_24521_cov_42.7219 . three_prime_UTR 20807 20821 . - . ID=g7406.t1.utr3p1;Parent=g7406.t1 #PROT g7406.t1 g7406 MFSSIRSAASLLRTGFRWVHTAPEGLSQGEKHLFDKLNVAFTPSHLLVEDISGGCGSMYRVEVESANFTGLSLVKQYRLVHDVLDEDIKKMHGIRIATKAPTAE* # ORIGINAL: g7403.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 12659 15056 . - . ID=g7403;Name=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 12659 15056 . - . ID=g7403.t1;Parent=g7403;Name=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 14190 15056 . - . ID=g7403.t1.exon1;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 14190 15056 . - 0 ID=cds.g7403.t1;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 13897 14019 . - . ID=g7403.t1.exon2;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 13897 14019 . - 0 ID=cds.g7403.t1;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 13234 13733 . - . ID=g7403.t1.exon3;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 13234 13733 . - 0 ID=cds.g7403.t1;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 12659 12959 . - . ID=g7403.t1.exon4;Parent=g7403.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 12659 12959 . - 1 ID=cds.g7403.t1;Parent=g7403.t1 #PROT g7403.t1 g7403 MAFDAVPNLSMALLEQYGLDDISSLDPSNVFALLDADADPDSALHGPPSPDSSSFVSLSPPSIMTGLLTPPNDDPMSVVKQEPMDADIDPFSAIAAALGAGLSSSAQVQQLQQMQCGNNNQGLINAHYSSPSDAGGFDAFAMPSAPKYSPYTMVSPVAAHPVSIAPAPPSSNGRSSAPLVPGILPPTPTSSDASSFMPMAHTVPLMHNASSPGGDGSSGRSSPEDRINKRQMRLIKNRESACQSRKKKKEHLVLLEQRISHYSRENATLREKLDVSEKSNASLRSELDELLAMIDSDPTLSAAWRKRSASVSVSSGRRFHAPAVAGICVMAIFFCVGFAFLDGSTLHSPLSKWLPSAPGVAPITTSMTVSEHLYLGRALKSADPLLFGLDQQDASVHINNNNKDNKDNIISAILEAERALRESARVENAVDRLPSGSRAPSRHRTRDRSSADVGAVAHAGGVVSSDATVSTEVGLWAAKQPQSPPVNALAPISAGRSEPDILSGDFLPEDWLDRRADTSYVFCAEVRQIWPATAAVKTNRPKVSLIIPSQSLVNTTTPGGDLPVRLVRSLVQIDAEVLGTRYMPIYNRTISADEDV* # PASA_UPDATE: g7402.t1, single gene model update, valid-1, status:[pasa:asmbl_6903,status:12], valid-1 NODE_404_length_24521_cov_42.7219 . gene 10111 12125 . + . ID=g7402;Name=g7402.t1 NODE_404_length_24521_cov_42.7219 . mRNA 10111 12125 . + . ID=g7402.t1;Parent=g7402;Name=g7402.t1 NODE_404_length_24521_cov_42.7219 . exon 10111 12125 . + . ID=g7402.t1.exon1;Parent=g7402.t1 NODE_404_length_24521_cov_42.7219 . CDS 10111 11940 . + 0 ID=cds.g7402.t1;Parent=g7402.t1 NODE_404_length_24521_cov_42.7219 . three_prime_UTR 11941 12125 . + . ID=g7402.t1.utr3p1;Parent=g7402.t1 #PROT g7402.t1 g7402 MAVWRRVLCLTDRQAACALVLGYVAFISLFSSIGDYRHANAFARKECNRAHAASLDKDGDGVVKIDEYFDRVFYINNDANTHARDVMRASMKELGFAAERRGVVKVSADMKKTYEEAVKLPLTAYERRMGRGKLLSGVSSIAHLRTVAGVIGDAKARGYRRILLLSDDVAFHREFNAEFDRRARTLPRTWRLMFLGSVLVGPTDIRGRDNDVDAKRMAADKQRATADGLHIASATSTSGSFAIGIDISVFDLLLFEIGKALYDFDYGALSGALFVHAHESLVFVPSLVVRTVLKTTDTDDSGTAQLDPHASALSLYLPPPPPLHPPKVCAVVTMKDSAETIEYAVRSLLSQTYAHIEVVVVDDGSADGSASIVARIAKKDPRVVLVTNKRNMGAYSSRNVGLRQCSPDADIYANHDADDFALSERIAWQVRPLIDNRAELSVGFRAKTRFAVGRDHGLRLLERLPDVTEKQQGHRGENSAGSPVILALGTLVVRMDVVRRLGMFQEGVRDGGSAEFLERYLARTLGMHFSAESFGAVEFIRLLSDGAFPPHVVRIDRVVTVGASLVGPDSSTPDDSPAVRTAREEYTVGYRKELTFDSVHPNMKAHHPF* # ORIGINAL: g7407.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 22540 23916 . - . ID=g7407;Name=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 22540 23916 . - . ID=g7407.t1;Parent=g7407;Name=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 23827 23916 . - . ID=g7407.t1.exon1;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 23827 23916 . - 0 ID=cds.g7407.t1;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 23553 23643 . - . ID=g7407.t1.exon2;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 23553 23643 . - 0 ID=cds.g7407.t1;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 23289 23326 . - . ID=g7407.t1.exon3;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 23289 23326 . - 2 ID=cds.g7407.t1;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 22833 22986 . - . ID=g7407.t1.exon4;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 22833 22986 . - 0 ID=cds.g7407.t1;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 22540 22652 . - . ID=g7407.t1.exon5;Parent=g7407.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 22540 22652 . - 2 ID=cds.g7407.t1;Parent=g7407.t1 #PROT g7407.t1 g7407 MPRLNIVLTNSRIGRSTKALVAKVRSNRDMIPRVVDCILETVQAVSDECLSQLEALVDAKDKTNIDAHYAALEYLIDINHALMGTVGVGHQSLDRICEVTLRHGLHSKLTGAGGGGCALTLVREGHNCESLALAVSELESLGFECWRTAIGGVGVAVDAEE* # ORIGINAL: g7401.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 7479 9290 . - . ID=g7401;Name=g7401.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 7479 9290 . - . ID=g7401.t1;Parent=g7401;Name=g7401.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 7479 9290 . - . ID=g7401.t1.exon1;Parent=g7401.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 7479 9290 . - 0 ID=cds.g7401.t1;Parent=g7401.t1 #PROT g7401.t1 g7401 MERRVIQRLLAGRIRKSDAFAFVTVVCVLFVIVHVFGGNESGSASPGWFSAGGDGAAFALGSPACNEQDALLLDANNDGIIQLDEYFDRVFYINADKMKMARDTMRATFRNLNIDKAERMALVDPEGKEITQRASAHSRKPLTEYEIRIGRGKLLAHAHDHALLKTWDNIITQAKKRGYARIVILSDDLQMHSQFTAEFDAKVRIIRSDWKLLFLGAYQADWEGVTWSGASGGVAYHPTTTSGAFAVGVHYSAYDLILFELRKGIYPVDYGALRAVSSLFHNESLVLHPNLVISTALPEDATLDSLRWDASLYAQPPPPLPLPKVCAVVAMKDSAETIEYAVRSLLSQTYAHIEVVVVDDGSADDSASIVASIAKTDPRVVLVTNKRNIGAYSSRNVGLRQCSPDAEIYANHDADDYSLPMRFATQIEPIIDNRAEITTALYVRTHVPASVFKLPLSSIAKMANAARVHRNARGDYKFCCREILALGTLMAKMSVFKRVGEFDETRFGGDGEFMERYLAKTRGMFITEAAFNAYVHFWKTPPIPPYYERMERTCMVGPDLNTSLSRTVPHTGDVRLAYMRSYRTKLLERASADGNNAHDNPFF* # ORIGINAL: g7398.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 116 1380 . + . ID=g7398;Name=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 116 1380 . + . ID=g7398.t1;Parent=g7398;Name=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 116 194 . + . ID=g7398.t1.exon1;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 116 194 . + 2 ID=cds.g7398.t1;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 293 344 . + . ID=g7398.t1.exon2;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 293 344 . + 1 ID=cds.g7398.t1;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 500 574 . + . ID=g7398.t1.exon3;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 500 574 . + 0 ID=cds.g7398.t1;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 781 888 . + . ID=g7398.t1.exon4;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 781 888 . + 0 ID=cds.g7398.t1;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 1132 1380 . + . ID=g7398.t1.exon5;Parent=g7398.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 1132 1380 . + 0 ID=cds.g7398.t1;Parent=g7398.t1 #PROT g7398.t1 g7398 CSLAMDQLAGDFAILKLDTARNTPLREMSEVVKALHRAHQSFELLEIAQGQTLTGIFTTYQLDIEAVKELLVLRLRAISDKESATKAKEDLLLKKKAGRDAMTKAEANESAAAVTLSRMTDVARNELIAFKRHRESDFRKALREFADASLSQARLQHSLWETALVEIRKASPSTAAAAAGAEQSHW* # ORIGINAL: g7400.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 6120 7244 . + . ID=g7400;Name=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 6120 7244 . + . ID=g7400.t1;Parent=g7400;Name=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 6120 6251 . + . ID=g7400.t1.exon1;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 6120 6251 . + 0 ID=cds.g7400.t1;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 6440 6561 . + . ID=g7400.t1.exon2;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 6440 6561 . + 0 ID=cds.g7400.t1;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 6750 6804 . + . ID=g7400.t1.exon3;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 6750 6804 . + 1 ID=cds.g7400.t1;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 7041 7244 . + . ID=g7400.t1.exon4;Parent=g7400.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 7041 7244 . + 0 ID=cds.g7400.t1;Parent=g7400.t1 #PROT g7400.t1 g7400 MPPGITGRGLVVFDGVCGLCGRFVKFAARHDTGDALRFAALPSKVARAALQSVNVSEEDAMSRMVYVEGDGRVLRGSTAVLTVMSHLRFPISMLGLLLWIPEWVREWVYDSVATRRYRLFGKETVTCTRRSDSAFRRRFVVDEHDNIGDTDDISTTGPHVAPEMHPRQCV* # ORIGINAL: g7404.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 15780 18533 . - . ID=g7404;Name=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 15780 18533 . - . ID=g7404.t1;Parent=g7404;Name=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 18367 18533 . - . ID=g7404.t1.exon1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 18367 18533 . - 0 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 17944 18019 . - . ID=g7404.t1.exon2;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 17944 18019 . - 1 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 17463 17606 . - . ID=g7404.t1.exon3;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 17463 17606 . - 0 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 17171 17278 . - . ID=g7404.t1.exon4;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 17171 17278 . - 0 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 16796 16893 . - . ID=g7404.t1.exon5;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 16796 16893 . - 0 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 16459 16514 . - . ID=g7404.t1.exon6;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 16459 16514 . - 1 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 16168 16310 . - . ID=g7404.t1.exon7;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 16168 16310 . - 2 ID=cds.g7404.t1;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 15780 15977 . - . ID=g7404.t1.exon8;Parent=g7404.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 15780 15977 . - 0 ID=cds.g7404.t1;Parent=g7404.t1 #PROT g7404.t1 g7404 MCAGGKINADVSDVEGHLIVARKNGSLDVISTLTGETVRSVGGIQGQIKGLEHWDDVVMTATDAGHVAIRSLAGDGVPAIVKEFSVGPNVQRMRGNQQCRNLLAVGGKEHDVTVWDANAPEKFVFRAKNLKHDNLDLRQPIWVTDIAFAPNENGAILAAATAHRQIRLYDTRVKKRPVMEMTYGEHPISVLTFAPDGTNVLCGTAIGDMISVDIRTGRQLGSFKGFAGGIRAIECHPTLPFVASCGLDRFLRVHSLQTRKTIHKVYLKQKLNALVFSAEGFVMSEADKARRRLKKRAPAVEEIEEDDALWASMEAAAQQRKKKKIARDD* # ORIGINAL: g7399.t1 original gene structure, not modified by PASA NODE_404_length_24521_cov_42.7219 AUGUSTUS gene 1980 5465 . - . ID=g7399;Name=g7399.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS mRNA 1980 5465 . - . ID=g7399.t1;Parent=g7399;Name=g7399.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS exon 1980 5465 . - . ID=g7399.t1.exon1;Parent=g7399.t1 NODE_404_length_24521_cov_42.7219 AUGUSTUS CDS 1980 5465 . - 0 ID=cds.g7399.t1;Parent=g7399.t1 #PROT g7399.t1 g7399 MLVQFRFSPFAAPPTEPAFAVFPLTDDDGFFPPATQAASTPAASAQATPTQVTQTPTTLRSDSTVSSSAPSGQTAIDGNSRRSSLVDASRHDASGSIFAGISDASPAALPAYGGCQDCDADGDDADVLSVLSARRRSSVDVLRRLSAESISHSVQRGSSEPLQARFVVTFDGCFLRINGKALRSEAMDATVALEADSSIWRVAVIDEMLIDVRVSPGGLHSKGMSSASSSRPSSRPASPAASMSMGHNGGNLFTGTVTCRYADGRKWTAPLATEGAGVALDVLDKMFPSTDASASSASLIAPLKSLLMSREGSMENALTEALNSTLAGVVDVQQQQQQQHAPVPQQRPSRYSLSSSSSSATSTTSSLLSRETDAAIAQGVHDLLVGYVCPMVLPESCPSTLLQSMMSRQASTIERIEAELEILAVKTQTLKETVKSMQRRLLPEISARAAGCGSDFLTSFLAGLVDTVDRSRRRLEELQEAVNVERESATVRKVSLTSSSAQPSQGEKERGSDRREGRRSVSRAANIGGRGDDNNNYNNNNDNNDDDDDPTPTRLRKLRRERDDAWRELTLVLTARESVADALKRRAGSKTHATLASIRRELSVGAVVGASNRGNSPRGSGPSSPTASGKASTTAQSTVSSTTTASATASSGARLRRTSRSNTTAARHITTASAGVINLSSGVGVDSAVDVATQAVYVGAHEDVVRTRLERNRLFSDKIFAIRVRESMRDALERSFGLQRTSAVPGSERSPLSSTFSPESIGESLGKVDVSALRSPSAGKGNGVDSSSEDEDDDDCGGGSDDEHNRDGNSTDGGFSSGGDTGGGGIRSGESTPRGTRPSMPSLDRAELIGQHVIGMMRWARHPLGRSLELFCASMKTAYAQPASLLHTSSPAASGVAPGSAEHHAATVVHERIASAIGDVRRYIRRTARSLRGVFGLEDGRSSGDANGAACVGAGSQRGAARGLASGGLGRRDMRDARAGLRSAVEAAVFGRMHDVLLGLYREEHGAKDALIARQMARYAGVLPSHLGVSPKFCLDIHAKGIKPFQDAIGAFRGMERARSPANKLACLLSTTRAIHAAIDMHWKGPASQFLGCADLLPLLGYVIIRSRIRDLGSHCAMLGDFLEGNSMLGEAGYMVVTLQTSLEFVATLTDDDVIVPGAAK* # ORIGINAL: g1127.t1 original gene structure, not modified by PASA NODE_1431_length_11394_cov_41.6129 AUGUSTUS gene 299 2920 . + . ID=g1127;Name=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS mRNA 299 2920 . + . ID=g1127.t1;Parent=g1127;Name=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 299 436 . + . ID=g1127.t1.exon1;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 299 436 . + 2 ID=cds.g1127.t1;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 790 831 . + . ID=g1127.t1.exon2;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 790 831 . + 2 ID=cds.g1127.t1;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 1052 1132 . + . ID=g1127.t1.exon3;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 1052 1132 . + 2 ID=cds.g1127.t1;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 1307 1774 . + . ID=g1127.t1.exon4;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 1307 1774 . + 2 ID=cds.g1127.t1;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 1917 2920 . + . ID=g1127.t1.exon5;Parent=g1127.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 1917 2920 . + 2 ID=cds.g1127.t1;Parent=g1127.t1 #PROT g1127.t1 g1127 AERKFKKSQQLWDQIDEEVKGTKQKSRLTSKLSVKKSSSKNDLRSIVSMGALKRSKSTEDVANAESSDASDDDVLSFEQVLGMDPSERPLSRKTSTFCPSESSSPSGSQPSSARSSMAPDEIPVVRRPPPPSFAPTAVPKSRGPLSPSSERKQSTASASPFADDFSASEDSRSRSESQPMLTAEDGDFPTERKERSFSENVALTSLASALTAANLGESAEVAVAAPAADQSNRSSGLSSASLVSEVASEPAAPPAEPDPAVVKRKTVLSNVFGGKPRPGSMIALVPPPRHSSLSSLVKKAEEESPPPPALPTPEELMFEYASKGDASGVVKCLKEGVNANVRDERGWTPLMVACNGKSVDVTRILLSIGGDVNASSSDGRTPLMLAACAGAVDVVNCLLDANASSFMREADGRTAYGLAHAQGSVAVLEAFERRLLSSLLEIDEQLSKILQQIIQAVGDMLARIRIITGPTGAKTIPSDMELGAALVDVVTASRTFIVTMTGSLLGMGGPNAPEVTALVSASIRRIDGVLDVIAKGVVGKVADQFVAVIGAMVKEVRRALFIYLEAAAEERQPKRT* # PASA_UPDATE: g1130.t1, single gene model update, valid-1, status:[pasa:asmbl_1568,status:12],[pasa:asmbl_1569,status:12], valid-1 NODE_1431_length_11394_cov_41.6129 . gene 8711 11210 . + . ID=g1130;Name=g1130.t1 NODE_1431_length_11394_cov_41.6129 . mRNA 8711 11210 . + . ID=g1130.t1;Parent=g1130;Name=g1130.t1 NODE_1431_length_11394_cov_41.6129 . five_prime_UTR 8711 8764 . + . ID=g1130.t1.utr5p1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 8711 8878 . + . ID=g1130.t1.exon1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 8765 8878 . + 0 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 9016 9126 . + . ID=g1130.t1.exon2;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 9016 9126 . + 0 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 9237 9349 . + . ID=g1130.t1.exon3;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 9237 9349 . + 0 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 9470 9552 . + . ID=g1130.t1.exon4;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 9470 9552 . + 1 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 9991 10008 . + . ID=g1130.t1.exon5;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 9991 10008 . + 2 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 10157 10232 . + . ID=g1130.t1.exon6;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 10157 10232 . + 2 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 10500 10624 . + . ID=g1130.t1.exon7;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 10500 10624 . + 1 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 10985 11115 . + . ID=g1130.t1.exon8;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 10985 11115 . + 2 ID=cds.g1130.t1;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . exon 11196 11210 . + . ID=g1130.t1.exon9;Parent=g1130.t1 NODE_1431_length_11394_cov_41.6129 . CDS 11196 11210 . + 0 ID=cds.g1130.t1;Parent=g1130.t1 #PROT g1130.t1 g1130 MLKAGKCVGIASRAAASVRQFHGSASVLISGETGLKPNVTRSKFGGKPSFNVAELGKMIDHDNHEMRAQMRDFLKDPIFIPKYAMPLEEEREIALRRLQKIADQKLFSVKDFRTNPHRIYAAHEVAGYADGSMATKLTVQCTVLKLGSERHHGKFLDGIDNLSEIGCFGLTELGYGNNAIEMETTAKYDKETREFVINTPNPLAQKYWITNGAIHAKWVIVFAQLEVDGQQQGIHTFLTRVRHNDMTSAKGVRIEDMPTLL* # ORIGINAL: g1129.t1 original gene structure, not modified by PASA NODE_1431_length_11394_cov_41.6129 AUGUSTUS gene 5733 7337 . - . ID=g1129;Name=g1129.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS mRNA 5733 7337 . - . ID=g1129.t1;Parent=g1129;Name=g1129.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 5733 7337 . - . ID=g1129.t1.exon1;Parent=g1129.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 5733 7337 . - 0 ID=cds.g1129.t1;Parent=g1129.t1 #PROT g1129.t1 g1129 MSCKTSLQVPARPPKPSTKAADKKLSAHFVDAQGASVLASYFGDASARLYVLRVLSSAAYNSSTECKQSLLQFVSPALDALNTAQLAVAAAGFLANLTMGLESSLASDDKLNSIIPESAASLSRLSSLSDGGSLKVARSICNVLIHLSACKERRKDFKAHGGDVAKALLTLASKAPTRGFTNDAVCELAVSLTRLVQRLMPSEISWRDTPQHRLPADAPNVDCAIRGSLASSSVDNAVAATEWQWMFSAAWTFLVTIAPNNGPLCQCAPLKRAVITIALVVDVRLQIDKTVSMSLRWQIWVATVSEPPLDADDAEMRIALCRSGISPEVANRFCFRDLGDCTTPQDLAVSLISSRLHDLRQRAVSEDDFSNEAVLVGLRTLLSPERYSVLSKVTIAAAAMRDDHFDLANFAFRLARSPEAYLVPSEHLEVLEELDANGGRLMTSDGITIVLVRSPAMADDNVDEEGSPGDEAIHIESNIVGAVPPVEDGEEILFHAGSLARLSCFLKRWAAFRSRMVAAGEEFANGYGPRGSLC* # ORIGINAL: g1128.t1 original gene structure, not modified by PASA NODE_1431_length_11394_cov_41.6129 AUGUSTUS gene 3215 4342 . - . ID=g1128;Name=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS mRNA 3215 4342 . - . ID=g1128.t1;Parent=g1128;Name=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 4340 4342 . - . ID=g1128.t1.exon1;Parent=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 4340 4342 . - 0 ID=cds.g1128.t1;Parent=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 3776 4094 . - . ID=g1128.t1.exon2;Parent=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 3776 4094 . - 0 ID=cds.g1128.t1;Parent=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS exon 3215 3567 . - . ID=g1128.t1.exon3;Parent=g1128.t1 NODE_1431_length_11394_cov_41.6129 AUGUSTUS CDS 3215 3567 . - 2 ID=cds.g1128.t1;Parent=g1128.t1 #PROT g1128.t1 g1128 MQSTLCTDALHRKVVYIDYRDVDWSNGVKTVMAAIDARYNVALLAFYISAQGPVDMALVWSQVTQARQVAAINYAHAKGAIVMISAGGQTDLPWSKFSTGEACRLFATVTGGYTGIYKASNNGIGWYNVQFYNQGATCSTTYDGLFLVCHPTAVFPGRIWSRMAFRSARSPSQMYLLAGDGTTDTSGLATAKQRESMGRDAGVSWWAFAASQSATWIQTIYPSD* # ORIGINAL: g6951.t1 original gene structure, not modified by PASA NODE_6361_length_584_cov_105.862 AUGUSTUS gene 2 545 . + . ID=g6951;Name=g6951.t1 NODE_6361_length_584_cov_105.862 AUGUSTUS mRNA 2 545 . + . ID=g6951.t1;Parent=g6951;Name=g6951.t1 NODE_6361_length_584_cov_105.862 AUGUSTUS exon 2 427 . + . ID=g6951.t1.exon1;Parent=g6951.t1 NODE_6361_length_584_cov_105.862 AUGUSTUS CDS 2 427 . + 2 ID=cds.g6951.t1;Parent=g6951.t1 NODE_6361_length_584_cov_105.862 AUGUSTUS exon 535 545 . + . ID=g6951.t1.exon2;Parent=g6951.t1 NODE_6361_length_584_cov_105.862 AUGUSTUS CDS 535 545 . + 2 ID=cds.g6951.t1;Parent=g6951.t1 #PROT g6951.t1 g6951 MTTKAAEDVVLIMTAYVLPWGIPARIQHDAGSEFENEIFDTFCRAYAIERHATSVDRPQANGQAERVFSTATDWLRKELMQSKTERWECAVAKVANSYNGSINSTTGKTPFELLRGELPQLPVDRQIGWKPVVRFINEDELYSV* # PASA_UPDATE: g8043.t1, single gene model update, valid-1, status:[pasa:asmbl_5731,status:3], valid-1 NODE_3217_length_3993_cov_38.574 . gene 200 2336 . + . ID=g8043;Name=g8043.t1 NODE_3217_length_3993_cov_38.574 . mRNA 200 2336 . + . ID=g8043.t1;Parent=g8043;Name=g8043.t1 NODE_3217_length_3993_cov_38.574 . five_prime_UTR 200 276 . + . ID=g8043.t1.utr5p1;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . exon 200 702 . + . ID=g8043.t1.exon1;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . CDS 277 702 . + 0 ID=cds.g8043.t1;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . exon 1047 1250 . + . ID=g8043.t1.exon2;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . CDS 1047 1250 . + 0 ID=cds.g8043.t1;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . exon 1698 2336 . + . ID=g8043.t1.exon3;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . CDS 1698 2000 . + 0 ID=cds.g8043.t1;Parent=g8043.t1 NODE_3217_length_3993_cov_38.574 . three_prime_UTR 2001 2336 . + . ID=g8043.t1.utr3p1;Parent=g8043.t1 #PROT g8043.t1 g8043 MASSLQATNVVPVLGVAIAPPHHKRPTTSFGSKILAGGFAGIVGVSCIYPLDLIKTRLQNQRAGPTGQLAYKGGLDCMQQILKAEGVRGLYRGLVWNLIGVTPEKAIKLAGNSYFRDLLQGDRETITLGEELMAGGGAGFCQVIVTTPMERIKIQFQVNGTSPDPKLRNMTAMDHIRTMGVSGIYRGTVATLLRDVPFSMMYFTLYANLKEHFADANGTTPFHKVLGSAFIAGTIASAAATPMDVVKTRLQAPLAPGEAPYKGIRECTARIWKNEGGAAFFKGVVPRVMIISPLFGIALTVFEIQQRYIG* # PASA_UPDATE: g8044.t1, single gene model update, valid-1, status:[pasa:asmbl_5732,status:12], valid-1 NODE_3217_length_3993_cov_38.574 . gene 2699 3993 . - . ID=g8044;Name=g8044.t1 NODE_3217_length_3993_cov_38.574 . mRNA 2699 3993 . - . ID=g8044.t1;Parent=g8044;Name=g8044.t1 NODE_3217_length_3993_cov_38.574 . five_prime_UTR 3993 3993 . - . ID=g8044.t1.utr5p1;Parent=g8044.t1 NODE_3217_length_3993_cov_38.574 . exon 2699 3993 . - . ID=g8044.t1.exon1;Parent=g8044.t1 NODE_3217_length_3993_cov_38.574 . CDS 3072 3992 . - 0 ID=cds.g8044.t1;Parent=g8044.t1;5_prime_partial=true NODE_3217_length_3993_cov_38.574 . three_prime_UTR 2699 3071 . - . ID=g8044.t1.utr3p1;Parent=g8044.t1 #PROT g8044.t1 g8044 PSPSSIAIHHPSVAHQTTQTLISVLTGLYEPTKGTARIDGYDLRTDMDKIHRRIGVCPQFDILSDDLTSREHLLFYARLKGVPRALETEKVEIALRQVNLLDAQHRLSKNLSGGMKRRLSLAIAIIGDPAIVILDEPTTGLDPKARHSVWEVLEAVKKDHSMILTTHGMDEADRLCTRIGIMSRGRLKCIGSQLHLKNKFGRGYQILFGCANESAIPSVREFVATVCPDAVLFEAFAGALAYSVPKELVHISSLFEKIEKDGPAAGVTDWGIKMTTLEDVFLNIIKRDEDEHGADDGGKRRNSLIV* # ORIGINAL: g6957.t1 original gene structure, not modified by PASA NODE_4787_length_1246_cov_38.6157 AUGUSTUS gene 15 910 . - . ID=g6957;Name=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS mRNA 15 910 . - . ID=g6957.t1;Parent=g6957;Name=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS exon 797 910 . - . ID=g6957.t1.exon1;Parent=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS CDS 797 910 . - 0 ID=cds.g6957.t1;Parent=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS exon 353 463 . - . ID=g6957.t1.exon2;Parent=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS CDS 353 463 . - 0 ID=cds.g6957.t1;Parent=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS exon 15 107 . - . ID=g6957.t1.exon3;Parent=g6957.t1 NODE_4787_length_1246_cov_38.6157 AUGUSTUS CDS 15 107 . - 0 ID=cds.g6957.t1;Parent=g6957.t1 #PROT g6957.t1 g6957 MVSAEATSTYIVDVVLRCVPGKSPKPRPAAANDKAEMQVVPVVLGLIEGISSVRIYIPNDLRSLDNRQSVDKSIREVKKRFNNSVPLLDPIEDMKITDEELRNIIK # PASA_UPDATE: g2716.t1, single gene model update, valid-1, status:[pasa:asmbl_8137,status:12], valid-1 NODE_5514_length_825_cov_43.228_potentialcontaminant . gene 20 806 . + . ID=g2716;Name=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . mRNA 20 806 . + . ID=g2716.t1;Parent=g2716;Name=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . five_prime_UTR 20 21 . + . ID=g2716.t1.utr5p1;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . exon 20 130 . + . ID=g2716.t1.exon1;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . CDS 22 130 . + 0 ID=cds.g2716.t1;Parent=g2716.t1;5_prime_partial=true NODE_5514_length_825_cov_43.228_potentialcontaminant . exon 239 306 . + . ID=g2716.t1.exon2;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . CDS 239 306 . + 2 ID=cds.g2716.t1;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . exon 534 635 . + . ID=g2716.t1.exon3;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . CDS 534 635 . + 0 ID=cds.g2716.t1;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . exon 747 806 . + . ID=g2716.t1.exon4;Parent=g2716.t1 NODE_5514_length_825_cov_43.228_potentialcontaminant . CDS 747 806 . + 0 ID=cds.g2716.t1;Parent=g2716.t1 #PROT g2716.t1 g2716 HKMCVYALPKTCNIVLIPEPIDASDLHPDSEEVEGSVDRLHSGKSGALSAELTLNQAHEQSASLLTLTSDGGEHVKITSIIEEEESDEESDRKSHALTSHNCPLCRSLFLWS* # PASA_UPDATE: g12872.t1, single gene model update, valid-1, status:[pasa:asmbl_5991,status:12], valid-1 NODE_3398_length_3559_cov_55.3875 . gene 286 3162 . - . ID=g12872;Name=g12872.t1 NODE_3398_length_3559_cov_55.3875 . mRNA 286 3162 . - . ID=g12872.t1;Parent=g12872;Name=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 3069 3162 . - . ID=g12872.t1.exon1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 3069 3162 . - 0 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 2636 2760 . - . ID=g12872.t1.exon2;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 2636 2760 . - 2 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 2355 2437 . - . ID=g12872.t1.exon3;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 2355 2437 . - 0 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 1700 1813 . - . ID=g12872.t1.exon4;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 1700 1813 . - 1 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 1414 1450 . - . ID=g12872.t1.exon5;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 1414 1450 . - 1 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 950 1093 . - . ID=g12872.t1.exon6;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 950 1093 . - 0 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 610 708 . - . ID=g12872.t1.exon7;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 610 708 . - 0 ID=cds.g12872.t1;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . exon 286 364 . - . ID=g12872.t1.exon8;Parent=g12872.t1 NODE_3398_length_3559_cov_55.3875 . CDS 286 364 . - 0 ID=cds.g12872.t1;Parent=g12872.t1;3_prime_partial=true #PROT g12872.t1 g12872 MQQASQRDHIVSLVPIPSPDDAADAASESTTADKPSTGAKKKKGNVASGDTSKAAVADIEGIDNKWVEEHARQVSRMLAGGLDVIGIYIYASTDSLNKLSGRSRQLLFLVAGAVRHRLLLPFLSTTEALVLTVDSTSKKVTCKSFDVADVKSTSRLAEYKTQTFASKWQHASCNVTVDIRAFPPAPSNDRPLTADAAIAASLEPYLTSLEGAIVLIDGAPHLADTQIAKLTNPTATNHTAEIHVTASLPVPSDKGACR # PASA_UPDATE: g6612.t1, single gene model update, valid-1, status:[pasa:asmbl_4144,status:12], valid-1 NODE_2364_length_6571_cov_39.8197 . gene 285 1590 . - . ID=g6612;Name=g6612.t1 NODE_2364_length_6571_cov_39.8197 . mRNA 285 1590 . - . ID=g6612.t1;Parent=g6612;Name=g6612.t1 NODE_2364_length_6571_cov_39.8197 . five_prime_UTR 1357 1590 . - . ID=g6612.t1.utr5p1;Parent=g6612.t1 NODE_2364_length_6571_cov_39.8197 . exon 622 1590 . - . ID=g6612.t1.exon1;Parent=g6612.t1 NODE_2364_length_6571_cov_39.8197 . CDS 622 1356 . - 0 ID=cds.g6612.t1;Parent=g6612.t1 NODE_2364_length_6571_cov_39.8197 . exon 285 388 . - . ID=g6612.t1.exon2;Parent=g6612.t1 NODE_2364_length_6571_cov_39.8197 . CDS 285 388 . - 0 ID=cds.g6612.t1;Parent=g6612.t1;3_prime_partial=true #PROT g6612.t1 g6612 MGNGVSQEAIGAKGAASAPQNGAAEAQAREREAASKAEITKLKGEVASRDKKIAELSEKLKTLADKEAMIRSLNQELDKLRSVLEQAIPTNLLAEDRKRSRAGSHAGVVAISVVEADEGLASKKTSEAGEHLHIHRDGTSASTVSMRGGLLDAPGGGHKLAVSAETYAESDPCEQLKGLKRVDKTDAQRELIRNAIMENTLLSHLEDVQLAELIDCMFEMTYKVGEYVVREGKKGDNFYVTAEGKVEVTKSNHDGTRMIIGTLDPGHVFGELAVLYDCT # PASA_UPDATE: g6613.t1, single gene model update, valid-1, status:[pasa:asmbl_4143,status:12], valid-1 NODE_2364_length_6571_cov_39.8197 . gene 2793 5531 . + . ID=g6613;Name=g6613.t1 NODE_2364_length_6571_cov_39.8197 . mRNA 2793 5531 . + . ID=g6613.t1;Parent=g6613;Name=g6613.t1 NODE_2364_length_6571_cov_39.8197 . five_prime_UTR 2793 2812 . + . ID=g6613.t1.utr5p1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 2793 3076 . + . ID=g6613.t1.exon1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 2813 3076 . + 0 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 3254 3425 . + . ID=g6613.t1.exon2;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 3254 3425 . + 0 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 3546 3681 . + . ID=g6613.t1.exon3;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 3546 3681 . + 2 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 3911 4468 . + . ID=g6613.t1.exon4;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 3911 4468 . + 1 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 4744 4869 . + . ID=g6613.t1.exon5;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 4744 4869 . + 1 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . exon 5316 5531 . + . ID=g6613.t1.exon6;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . CDS 5316 5526 . + 1 ID=cds.g6613.t1;Parent=g6613.t1 NODE_2364_length_6571_cov_39.8197 . three_prime_UTR 5527 5531 . + . ID=g6613.t1.utr3p1;Parent=g6613.t1 #PROT g6613.t1 g6613 MLVAIALRAALSCACALCVLLTLFVVAVRVRRVVSSSRANRVRIGFFHPYCNAGGGGERVLWCAVRATQNKYDRAECIVYTGDAASGEDILRKAQHSFGIVLPQPVTFVHLSLRGWVEASRYPVLTLLGQSMGSILLGLEALVKTVPDVYIDTMGYAFTLPIFGFIGGCNVGCYVHYPTISTDMLELVKERRATYNNAGVVARSRTLSAAKLGYYRFFAATYGFVGRASTSVMVNSTWTRNHIDSIWRIPARTAVVYPPCDTRSLQEIPLEGRPYNVNGASVPSGAALSARGHKIVSVAQFRPEKNHVLQLRALALLLKERPSLRVTVLLVFVGGCRGADDEARVASLRALAVELGVDKNVSFRINAPHEELVGHLASSLVGLHCMWNEHFGIGVVEYMASGAIAVAHRSGGPLMDIVTGANTPNGTGFLAETADEFASAILNVIDMGDGQRAAMQRRAREHVTRHFSERSFEEGWLAACAKIVPSQQ* # ORIGINAL: g10714.t1 original gene structure, not modified by PASA NODE_4078_length_2223_cov_40.2691 AUGUSTUS gene 1099 1899 . + . ID=g10714;Name=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS mRNA 1099 1899 . + . ID=g10714.t1;Parent=g10714;Name=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS exon 1099 1423 . + . ID=g10714.t1.exon1;Parent=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS CDS 1099 1423 . + 0 ID=cds.g10714.t1;Parent=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS exon 1548 1642 . + . ID=g10714.t1.exon2;Parent=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS CDS 1548 1642 . + 2 ID=cds.g10714.t1;Parent=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS exon 1762 1899 . + . ID=g10714.t1.exon3;Parent=g10714.t1 NODE_4078_length_2223_cov_40.2691 AUGUSTUS CDS 1762 1899 . + 0 ID=cds.g10714.t1;Parent=g10714.t1 #PROT g10714.t1 g10714 MERTLDPSLLSVDTGDAHRRISGGSVVVSDDDVLSGDEASETVVRGSATRTPADAHACAPTARAGASAAASSTEGLAAAIASVAGSARAGAQGTIKYSAEAMHMTSQLFFLDYYFDLLTYIGKRRQRTAALKAALQNDTQLSDADREAEWRRYLGKERVLLRKRRLRLRFNDFSVLTQIGQGGYGE # ORIGINAL: g2800.t1 original gene structure, not modified by PASA NODE_4623_length_1397_cov_40.7224_potentialcontaminant AUGUSTUS gene 30 461 . + . ID=g2800;Name=g2800.t1 NODE_4623_length_1397_cov_40.7224_potentialcontaminant AUGUSTUS mRNA 30 461 . + . ID=g2800.t1;Parent=g2800;Name=g2800.t1 NODE_4623_length_1397_cov_40.7224_potentialcontaminant AUGUSTUS exon 30 461 . + . ID=g2800.t1.exon1;Parent=g2800.t1 NODE_4623_length_1397_cov_40.7224_potentialcontaminant AUGUSTUS CDS 30 461 . + 0 ID=cds.g2800.t1;Parent=g2800.t1 #PROT g2800.t1 g2800 MNVYNAWNYDEWSLNAGYMASKAFYNQPASDANCEDCTPLTFTSVRDVVFAALDDIILAKETLQSASIREILFKNMSGFNDDYHCTDADDVDADVLSDKFTGFAKISVVDGDFTCRDLLYGFLECKSSSATFGTKKSKTLLSP* # ORIGINAL: g4892.t1 original gene structure, not modified by PASA NODE_2400_length_6416_cov_44.7352 AUGUSTUS gene 1 3674 . - . ID=g4892;Name=g4892.t1 NODE_2400_length_6416_cov_44.7352 AUGUSTUS mRNA 1 3674 . - . ID=g4892.t1;Parent=g4892;Name=g4892.t1 NODE_2400_length_6416_cov_44.7352 AUGUSTUS exon 1 3674 . - . ID=g4892.t1.exon1;Parent=g4892.t1 NODE_2400_length_6416_cov_44.7352 AUGUSTUS CDS 1 3674 . - 0 ID=cds.g4892.t1;Parent=g4892.t1 #PROT g4892.t1 g4892 MDKTKSRRKIKPPPAKTNATISAQVATTMSDAANIRSDPTFVALLYSPPKKWTVVLRNALAEFNGDVPLKYRRLNTKQITSKYATFTKKYSTYRTPPLPPAYKQSALTDAQKTAMRAGAANAKDKRELKVLKATHTVGDSETFLDAISSARKRIKENRIRTKNYVAPLQSLLDRPLPRDFKSKRGTERIHAATHTADDDDMNDMVATELRKIHKTLSHVYRLNVQSACILKRKSRPSDSEYDENSDTYIYRVFTEGNNTNAWTSPPLIVSDAQFEQVLKDRRIGEGLFGRERSVDYENSSWSFVTWLYIAVQIDQVESQHLGAGLLPESLRNLKCMYSLDNFADNLCFWRCLTLYNETTKRPPGRAVDPRRMKTALKDLYTDIMGEPLPSNYPGLDLTSKHAEAIIKKAEKHLKVGINLYERILVRKHRDTYERDEYPNADSEDSDDDADETELGDLEPKISLLRRSDPYDDKVYINVYRSDNIQHASLVNDFKTYAKSGFLCKTCARRVFRTQKLAAEHERVCKLETNYKYAKRVNGARPAYDPFKYSLFTRLKDRGMDTSNLETIYPFLMVWDLEALNHDLTYASAARTQWTAEQRPISWAIAHNVPDLEPIQCDTIKLNSDGSPDFYGLVLSMVQAMTKVALRASELVHEYYSEVIAALADRVSEHETHAAEADPEDQMRAKQELNDVIRLQSDFTRFISQIPTIGFNTSGYDLNLIKNWIHQALDACDQTSKSTIKRRNKTMQMTTNNILFLDQMNYTAAGTTLESFMKAYHPQGGDACVKWIFPCDLIRSVECLDQKMEFPALSAFSSFIKPNSRTNVSHYEQMHARWNESNWTTLREYLVAYNIQDVKPFLESCANFQYMYHHMGDKRLDITKDAISLPGISPRFGYLESDNADIRLFCKDDEAVYKRYRESMIGGPSIIFRRYAEAGVTKIRDTDNLCQRVVGYDCNALYLWATAQTMPIGDFKHRTDLRGAPKHAIDRFIKQIRDGTVFGLVTCDIHVPKDLHERFSEMTPIFKNTQLKPEHLSPLMHNMMISKGKSLHRSLVGSMHAEELSLITPLLKWYIDNGLIVTKIHDVVQYETSAACFAPFADFVSDARRSGDINKDKAPIADAWKTLGNSFYGYACQDKSKHTTAIYVSADDPKLVQKHLNSRLFKSRTLINDRHWEYIMYKRSVDVGSLPLPISVFVYQYAKLRILDWYYNCLVKYFPVTHWEALFMD # ORIGINAL: g4369.t1 original gene structure, not modified by PASA NODE_1512_length_10809_cov_51.3339 AUGUSTUS gene 1215 3781 . - . ID=g4369;Name=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS mRNA 1215 3781 . - . ID=g4369.t1;Parent=g4369;Name=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 3589 3781 . - . ID=g4369.t1.exon1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 3589 3781 . - 0 ID=cds.g4369.t1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 3032 3494 . - . ID=g4369.t1.exon2;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 3032 3494 . - 2 ID=cds.g4369.t1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 2704 2813 . - . ID=g4369.t1.exon3;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 2704 2813 . - 1 ID=cds.g4369.t1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 2216 2452 . - . ID=g4369.t1.exon4;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 2216 2452 . - 2 ID=cds.g4369.t1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 1626 1912 . - . ID=g4369.t1.exon5;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 1626 1912 . - 2 ID=cds.g4369.t1;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 1215 1382 . - . ID=g4369.t1.exon6;Parent=g4369.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 1215 1382 . - 0 ID=cds.g4369.t1;Parent=g4369.t1 #PROT g4369.t1 g4369 MSMRLVRCGASRTCILGKCGQPRVYSHATPRRCMSTPSARVSTAMANLPPPAQLPRRRVVVTGLGLVTPLGVGVELTWKRLIDGHVGTSSLSEHGEDFVRLFAKHDLPSTVIARVPRGTGLGEYDPKQWLQPGDDKKMPSFVQFAVAAAKQALADARFDPNVTAESRVRTGVAIGSGMVGLEDIIEAADTLNTKGVRRISPFFVPRILVNMAAGHVSIAHGMQGPNHAASTACATGAHSIGDAYKLVRDGDADVMVAGGSESCIHPLALAGFSRAKALSTQFNDRPREASRPFDKDRDGFVMGEGAGVVVLEEYSHALARGASIYAEVRGYGLSGDAHHITAPSDDGRGAVQCMRAALGGSGLPIESVDYINAHATSTPLGDAIENRAIKALFQGRARSLCVSSTKGATGHLLGAAGAVEAIFAILAIARNTVPPTANLHNRTDEFDLDYVPLAAQRRNVDVAITNSFGFGGTNACLCFAKPTPL* # PASA_UPDATE: g4370.t1, single gene model update, valid-1, status:[pasa:asmbl_1826,status:3], valid-1 NODE_1512_length_10809_cov_51.3339 . gene 4369 7970 . + . ID=g4370;Name=g4370.t1 NODE_1512_length_10809_cov_51.3339 . mRNA 4369 7970 . + . ID=g4370.t1;Parent=g4370;Name=g4370.t1 NODE_1512_length_10809_cov_51.3339 . five_prime_UTR 4369 4513 . + . ID=g4370.t1.utr5p1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 4369 4556 . + . ID=g4370.t1.exon1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 4514 4556 . + 0 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 4688 4815 . + . ID=g4370.t1.exon2;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 4688 4815 . + 2 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 4962 5186 . + . ID=g4370.t1.exon3;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 4962 5186 . + 0 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 5306 5434 . + . ID=g4370.t1.exon4;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 5306 5434 . + 0 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 5596 5732 . + . ID=g4370.t1.exon5;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 5596 5732 . + 0 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 5949 6113 . + . ID=g4370.t1.exon6;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 5949 6113 . + 1 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 6320 6490 . + . ID=g4370.t1.exon7;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 6320 6490 . + 1 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 6650 6762 . + . ID=g4370.t1.exon8;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 6650 6762 . + 1 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 6957 7405 . + . ID=g4370.t1.exon9;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 6957 7405 . + 2 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . exon 7609 7970 . + . ID=g4370.t1.exon10;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . CDS 7609 7674 . + 0 ID=cds.g4370.t1;Parent=g4370.t1 NODE_1512_length_10809_cov_51.3339 . three_prime_UTR 7675 7970 . + . ID=g4370.t1.utr3p1;Parent=g4370.t1 #PROT g4370.t1 g4370 MRLISVVAVVLLASACVALPVRRREAPAGWTPSGSPSDDELVTLTFALKQQNLDWLESKFWSVSNPLSRDYGKHMTAAEIAAVVRPTDKAVDAVTAFIASYGIREFTHSIGKDYIIVKSATVATATKMFSAEFANYKHTTGRRAIRALDYSIPEAIAEHVDMILGLGDFPVLVRLAHIAQGKKTYDDEVKTSPNSINTAYNLSSAVATNPKSSQAVAAFLKQYYSPSDLAKFQKNNNIAVRDIDVVTGPNDANNAGVEAQLDVEYIQATGRNVTTWFISEAGLANDGQEDFLHWATTVLNTTNAPWVHSLSYGDVESTIDATYIQRADVEFQKLGVSGRTVLLASGDSGVGCDSNIFVPNWPASSAYVTAVGGTTIPILSSKESAWSSGGGGFSNVFPQPAFQAEAVAAYLASGVAPDAKFFNKTGRAYPDIAAFATGYQIVYNGATEDVGGTSCSAPTVAGIVALLNDVRLNAGKPTLGHLAPLLYELGKSHPEAFNDIVNGSNPGGIGCPGFKATKGWDPATGWGSPNYGILKGLVLDY* # PASA_UPDATE: g4371.t1, single gene model update, valid-1, status:[pasa:asmbl_1828,status:12], valid-1 NODE_1512_length_10809_cov_51.3339 . gene 8126 10809 . + . ID=g4371;Name=g4371.t1 NODE_1512_length_10809_cov_51.3339 . mRNA 8126 10809 . + . ID=g4371.t1;Parent=g4371;Name=g4371.t1 NODE_1512_length_10809_cov_51.3339 . five_prime_UTR 8126 8221 . + . ID=g4371.t1.utr5p1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 8126 8382 . + . ID=g4371.t1.exon1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 8222 8382 . + 0 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 8742 8857 . + . ID=g4371.t1.exon2;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 8742 8857 . + 1 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 9068 9113 . + . ID=g4371.t1.exon3;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 9068 9113 . + 2 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 9334 9459 . + . ID=g4371.t1.exon4;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 9334 9459 . + 1 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 9822 9867 . + . ID=g4371.t1.exon5;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 9822 9867 . + 1 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . exon 10478 10809 . + . ID=g4371.t1.exon6;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . CDS 10478 10777 . + 0 ID=cds.g4371.t1;Parent=g4371.t1 NODE_1512_length_10809_cov_51.3339 . three_prime_UTR 10778 10809 . + . ID=g4371.t1.utr3p1;Parent=g4371.t1 #PROT g4371.t1 g4371 MSFRFHIALTIAVALLAASAFSDAASLTGNKNVVSLTTHEFDERVLNGEWLIVFHADWCPHCKRILPILSEVARRVSRKGAKIATVDVDQEPILSGRFYISSLPTIYHIKDGEVRYFGGARDENSIVEFVQSGYQSTEPMNYLTSPMSPHLRLLGHVFKFALFINQIYDTLINDYELPVPAVVAIVIFGVLASSVVLAGFMIVVTDIFSWLFGKRTSAAAAAPQQQQKAGAQQAGSKDTKSEASAAKTSGSPKSAGGRKSKKAD* # ORIGINAL: g4368.t1 original gene structure, not modified by PASA NODE_1512_length_10809_cov_51.3339 AUGUSTUS gene 154 1018 . + . ID=g4368;Name=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS mRNA 154 1018 . + . ID=g4368.t1;Parent=g4368;Name=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 154 242 . + . ID=g4368.t1.exon1;Parent=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 154 242 . + 0 ID=cds.g4368.t1;Parent=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 601 729 . + . ID=g4368.t1.exon2;Parent=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 601 729 . + 1 ID=cds.g4368.t1;Parent=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS exon 943 1018 . + . ID=g4368.t1.exon3;Parent=g4368.t1 NODE_1512_length_10809_cov_51.3339 AUGUSTUS CDS 943 1018 . + 1 ID=cds.g4368.t1;Parent=g4368.t1 #PROT g4368.t1 g4368 EMATQEDNAFIKGVCFSSDGRIICSPKGRGVRLLDFHRAAEMARKESFYMVSDDSPHWIAEHSIHGAPVLACRFSPVAPTLATGALDGSIVFYSPEL* # ORIGINAL: g524.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 9738 15596 . - . ID=g524;Name=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 9738 15596 . - . ID=g524.t1;Parent=g524;Name=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 15536 15596 . - . ID=g524.t1.exon1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 15536 15596 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 15305 15420 . - . ID=g524.t1.exon2;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 15305 15420 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 14943 15102 . - . ID=g524.t1.exon3;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 14943 15102 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 14657 14790 . - . ID=g524.t1.exon4;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 14657 14790 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 14261 14516 . - . ID=g524.t1.exon5;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 14261 14516 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 13963 14136 . - . ID=g524.t1.exon6;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 13963 14136 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 13624 13841 . - . ID=g524.t1.exon7;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 13624 13841 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 13280 13466 . - . ID=g524.t1.exon8;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 13280 13466 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 12886 13064 . - . ID=g524.t1.exon9;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 12886 13064 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 12487 12663 . - . ID=g524.t1.exon10;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 12487 12663 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 12199 12288 . - . ID=g524.t1.exon11;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 12199 12288 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 11838 12057 . - . ID=g524.t1.exon12;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 11838 12057 . - 0 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 11330 11731 . - . ID=g524.t1.exon13;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 11330 11731 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 10774 11142 . - . ID=g524.t1.exon14;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 10774 11142 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 10266 10667 . - . ID=g524.t1.exon15;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 10266 10667 . - 2 ID=cds.g524.t1;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 9738 9955 . - . ID=g524.t1.exon16;Parent=g524.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 9738 9955 . - 2 ID=cds.g524.t1;Parent=g524.t1 #PROT g524.t1 g524 MTKDELRFDGRVAIVTGAGGGLGRTYALLLASRGASVVVNDLGGNIRGEGQSSSAADKVAGGGKAVANYDSVEEGDKIVKTAIEAFGRIDIVINNAGILRDKSFARIGDADWDIIHRVHLRGSFMVTRAAWPHMQKQKYGRIIMTASAAGVYGNFGQANYSAAKLGLLGLSNTLAIEGAKQNIHCNTIAPVAGSRLTETVFPEELVQSLKPEYVAPLVAFLCNEASEENGGLFELGAGWISKLRWQRTRGVLVKSKGGSFISPEDVRDHWEQIVDFSNPEYPTSIQESMATVMAALNIDSGASANPTSASSVNLREALAHKFAPDSFSFTERDIILYALGIGASNQRPEELKFLFEGHSDFTALPTFGVIPAQASLAQMISGVPGFEFNMTQLLHGEQYLEVLRPMPTSGRLTSQATITDILDKGHGKGSVILMDVTSADEAGNPVCINQFSLFIRGTGGFGGRQSTTAVRGESLGNPPNRRPDAVDQERTTEKQAALYRLSGDPNPIHIDPEMATMAGFKAPILHGLCSFGYAARHVLRHFANNDTAAFRAIKVRFAKPVIPGETIQTEMWRVGPNRIQFQSKVVERNELVLSGGYVDLHPASGGIHASNVSGGLASDAVFAEIGGRISEAADLVQKVKAVFQFNITKDGKQAAQWTIDLKSGKGGLAKGPASPKADCTITISDADFVQLVEGKLNAQKAFMSGKLKVAGNIMLSQKLETIFKQKSAGATAPKAAAAPAAPAAPAAPVLKSEAIFAEIGKRISGSADLVQKVKAIFQFNITKDGKQAGQWTIDLKNGGGSVAKGPASPKADCTITIADDDYVQLVEGKLNAQKAFMSGKLKVAGNIMLSQKLETIFKDKSKGVAAVKTAGGLASDAVFEEIGGRISEAADLVQKVKAVFQFNITKDGKQAAQWTIDLKSGKGGLAKGPASPKADCTITISDADFVQLVEGKLNAQKAFMSGKLKVAGNIMLSQKLETIFKQKSAGATAPKAAAAPAAPAAPAAPVLKSEAIFAEIGKRISGSADLVQKVKAIFQFNITKDGKQAGQWTIDLKNGGGSVAKGPASPKADCTITIADDDYVQLVEGKLNPQKAFMSGKLKVAGNIMLSQKLETIFKQKSKL* # ORIGINAL: g529.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 27268 28390 . - . ID=g529;Name=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 27268 28390 . - . ID=g529.t1;Parent=g529;Name=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 27986 28390 . - . ID=g529.t1.exon1;Parent=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 27986 28390 . - 0 ID=cds.g529.t1;Parent=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 27637 27894 . - . ID=g529.t1.exon2;Parent=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 27637 27894 . - 0 ID=cds.g529.t1;Parent=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 27268 27363 . - . ID=g529.t1.exon3;Parent=g529.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 27268 27363 . - 0 ID=cds.g529.t1;Parent=g529.t1 #PROT g529.t1 g529 MDTDNGRLHQRIQSNLSARLVGTKIPRGYTNIKAVCRAEKNIIAGMWADVEKARAIQDAIDYYPLMLSRPAMDEWADNTLLVVQLAVELTGALQYAASSRLPRPRLGQVYQVFLAASDLLQRVLGVAAVQDLCEEIYELARLDRVLHLAEEHPTALAQPIDEAFVSECRRSALKVSTDVSIALEQSRASGTEMARVSQLQAHDARAAALCNRIFGASFVSEPADPVDAQSILDFDGAEFYELLHGKDSTLLS* # PASA_UPDATE: g525.t1, single gene model update, valid-1, status:[pasa:asmbl_3589,status:12], valid-1 NODE_212_length_31301_cov_45.3235 . gene 16485 16903 . - . ID=g525;Name=g525.t1 NODE_212_length_31301_cov_45.3235 . mRNA 16485 16903 . - . ID=g525.t1;Parent=g525;Name=g525.t1 NODE_212_length_31301_cov_45.3235 . five_prime_UTR 16755 16903 . - . ID=g525.t1.utr5p1;Parent=g525.t1 NODE_212_length_31301_cov_45.3235 . exon 16485 16903 . - . ID=g525.t1.exon1;Parent=g525.t1 NODE_212_length_31301_cov_45.3235 . CDS 16485 16754 . - 0 ID=cds.g525.t1;Parent=g525.t1 #PROT g525.t1 g525 MFGIGFGGHHHHHHHHHGHHHPHGQVVFQPAPMYAPMVVAPQHYPPVYVAPSHGPTIVFGGGFHHGHHHHGHHGHHGHHGHHGHHGHHF* # ORIGINAL: g527.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 20614 22947 . - . ID=g527;Name=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 20614 22947 . - . ID=g527.t1;Parent=g527;Name=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 21856 22947 . - . ID=g527.t1.exon1;Parent=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 21856 22947 . - 0 ID=cds.g527.t1;Parent=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 20952 21622 . - . ID=g527.t1.exon2;Parent=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 20952 21622 . - 0 ID=cds.g527.t1;Parent=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 20614 20827 . - . ID=g527.t1.exon3;Parent=g527.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 20614 20827 . - 1 ID=cds.g527.t1;Parent=g527.t1 #PROT g527.t1 g527 MDTPDVHHGTPHHHRSTTVMRAYGFLWAVVITLMGWHLTLRASAVANVYETAFLACECVMLGMAAFHFTLLLGDARKCPAVALSSERDAVACEVATPRVDIVICCYKEPLEVVAVTLRNALSVEYPTDWLRIFVLDDGHDASSFPRDLCSAVGSTCNRRFIYVRRGDNKGAKAGNLNNYISMFTRNNNTRPGSVTPMQRKKSCIALQYDPRRPDAPSNPFAIHHSSLSPDHFLVLDADMQCRATILGSLLPHLESDPQVAFVQAPQRFFAPEKESPVSWMLRESDAFHNVTQAARDGWGHICSTGSNVMYRRAAVDSVGGFPESCVTEDMALTAQLAGAGWTARYHPETVAEVGRGGGSDGHLSGHFAGDTCAWMKQHQRYTEGDAQILARLLSVASIPSDSLKAPKIGPLDSPVLSRQNSSKTGTPSVHVPELRACAVAVDRALLSLPSSRFTFTHYNGMCTRVRFFFLFYCAKGLVAPLVTWHAFDALIRVVCGCGAPPGTDPRLYSALLASTVAAELLRYGPDIYSHLRRKQCYLLLLESMSRGWPAAFGKHCRFVCTMSDEAKGRASLPHHIAYAAASVFAAVCCRQLLPEVLRAVLLTATVLPTLFAAHGSPCGIRASSCLSSHLVPIASVAIACTFMLCTGNPVLFPILLTY* # ORIGINAL: g523.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 6573 8908 . - . ID=g523;Name=g523.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 6573 8908 . - . ID=g523.t1;Parent=g523;Name=g523.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 7475 8908 . - . ID=g523.t1.exon1;Parent=g523.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 7475 8908 . - 0 ID=cds.g523.t1;Parent=g523.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 6573 7328 . - . ID=g523.t1.exon2;Parent=g523.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 6573 7328 . - 0 ID=cds.g523.t1;Parent=g523.t1 #PROT g523.t1 g523 MSRGGRGDQLQLELLSRIAGQHGLRGDITVRLGFERLNAAVGTAHFSEEYASLKGYIMSNRGDGSSSPAFAGTNSVHRDASSGKSDPGTPDSNSSGGSSGGVPSDGFGDELTSLSWLSSMTMPLGSLENEEVAVPTQPLIAPLSPPLAPVHAPGSASMPGTPLMSSRSAIPMGSPKRFASPSLTKRSLSFTGPPSPLIKPLDLLPSADEPKAPRQRASFQGVGLLSGLSSPLFVPQMQTPAKGGKMERADTAGGMVGESISSRKENIPTSDLKSTAMQRAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQIETATTTTPTRTRRITRRQASAPAGVEETPSQPSTPTATPSRRRGSKTPSTAAIPEAVTPTTPQSNKRKKRATKGTDSSDTSAGSSDEDRELLESVLGLSDNSSSDGIDMADTSSKPPYSFACLIALAINSTDCKRMTVSEIYEWVKDAFPFYRDANNGWKNSVRHNLSLNKCFKRVSREKEDGGKGSYWMIEPTYERVITQAIAKHQQKSSMVQTGSRTPIKKKHARRHTTGSVNVKNLRNLGKYMPLIGLDMDPMSLGELSQGISQRLSSRGGESSTHNVNGAVGSFAACEPPFFSLDGDMDVATPPDLDDMLEDCDVAMTIGIMGGHELPHISGDPTVDDYLSQEFLKDLDFDGPEGAVPGEKGGDHAIHPGTFLSASLDGSLISTFAHCGLAENFAGTWDSQELSLHF* # ORIGINAL: g530.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 29284 31301 . + . ID=g530;Name=g530.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 29284 31301 . + . ID=g530.t1;Parent=g530;Name=g530.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 29284 31301 . + . ID=g530.t1.exon1;Parent=g530.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 29284 31301 . + 0 ID=cds.g530.t1;Parent=g530.t1 #PROT g530.t1 g530 MMNNDTTASPALRISEKRKRDDDTDLHEQRTLALRPCTSDANGLDNGIGFSSESGDVAADVSPVSDNRESMNDFTGNEHGTNQDEPVTPELSGCSICTRRSGPPIQCYAATGQVMLSKVVPATAGTATSCFTAMHAAADHCIPMAARWPDLPSFFDDIKQAFTAPNRNISPPTEARARLDETQLSADTCFITATRPVKRQLWGERLFRAILFDNYEGCALEMNGNELAEFIEVAAASVNTGAQTGFHFVKSNGKVTRALTKFGRCDKVDGGDRRGVLIPVAAHPVNIDLFFPFTRGTVDAAAIAYARKSNIALVAMHSPSSPRNVTAQQICHAADFTDFNVELLIGHIERRNSNAFVGPARPGSIIALVFRPLDSKDGLNLPADTTLDGSPYVMDLNNLEPKDIASCLRRKAVCEPVCHAIEEEEIIGLDLFEMDVDQFVNSVASDALDDEKRSIAINAICAFRDSLLALCPSTVVEQIVDPAMDRSLPASPSAGARRMPSFPPASPLDTMRLHADQGNAVAQYDLGNCYSDGNGVVKDESTAAGWFRKAADQGNVNAQNRLGVYYSSGTGVAKDESTVVTWFRKAANQGHAEAQFNLGNCYFNGNGVRTDESTAVTWYRKAADQGFAEAQNALGNCYSDGTGVVKDESTAVKWYRKAADQGSAEAQNALGN # ORIGINAL: g522.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 3824 4884 . - . ID=g522;Name=g522.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 3824 4884 . - . ID=g522.t1;Parent=g522;Name=g522.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 4142 4884 . - . ID=g522.t1.exon1;Parent=g522.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 4142 4884 . - 0 ID=cds.g522.t1;Parent=g522.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 3824 3959 . - . ID=g522.t1.exon2;Parent=g522.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 3824 3959 . - 1 ID=cds.g522.t1;Parent=g522.t1 #PROT g522.t1 g522 MVWLVNTCHWINCGKTFSSTEDLIQHVEEFHIDSETSSFVSGGQDGQRPSTIHLSHVSRFFSEEALAKRKYSSMAQCGSENAGVSVHRPSVAPTSVRKGIPMAVSTGLNGMNVASSSSPTDSGVSSGSATRDGSPSVLMRKRCKSESHARADAEDFDDLDDGSLSDTGSFHTSDEESSPPVASRPTIRMSEVMLRSIKMDDNSEKPYMCLVPGCGKRYKNPNGIKYHALHGHALPGDSRLKKTARFVRCEICGKRYKNTTGLRNHVSVMHPTEGIEQAVRQMANVKCSIPAC* # PASA_UPDATE: g528.t1, single gene model update, valid-1, status:[pasa:asmbl_3585,status:3], valid-1 # PASA_UPDATE: g528.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3586,status:12],[pasa:asmbl_3590,status:12], valid-1 NODE_212_length_31301_cov_45.3235 . gene 24027 26749 . - . ID=g528;Name=g528.t1 NODE_212_length_31301_cov_45.3235 . mRNA 24027 26749 . - . ID=g528.t1;Parent=g528;Name=g528.t1 NODE_212_length_31301_cov_45.3235 . five_prime_UTR 26680 26749 . - . ID=g528.t1.utr5p1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 26677 26749 . - . ID=g528.t1.exon1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 26677 26679 . - 0 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 26322 26476 . - . ID=g528.t1.exon2;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 26322 26476 . - 0 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 25943 26041 . - . ID=g528.t1.exon3;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 25943 26041 . - 1 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 25492 25603 . - . ID=g528.t1.exon4;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 25492 25603 . - 1 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 24739 24816 . - . ID=g528.t1.exon5;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 24739 24816 . - 0 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . exon 24027 24373 . - . ID=g528.t1.exon6;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . CDS 24248 24373 . - 0 ID=cds.g528.t1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . three_prime_UTR 24027 24247 . - . ID=g528.t1.utr3p1;Parent=g528.t1 NODE_212_length_31301_cov_45.3235 . mRNA 24033 26749 . - . ID=g528.t1.1.5b6be70b;Parent=g528;Name=g528.t1 NODE_212_length_31301_cov_45.3235 . five_prime_UTR 26582 26749 . - . ID=g528.t1.1.5b6be70b.utr5p1;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . exon 26322 26749 . - . ID=g528.t1.1.5b6be70b.exon1;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . CDS 26322 26581 . - 0 ID=cds.g528.t1.1.5b6be70b;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . exon 25943 26041 . - . ID=g528.t1.1.5b6be70b.exon2;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . CDS 25943 26041 . - 1 ID=cds.g528.t1.1.5b6be70b;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . exon 25492 25603 . - . ID=g528.t1.1.5b6be70b.exon3;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . CDS 25492 25603 . - 1 ID=cds.g528.t1.1.5b6be70b;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . exon 24739 24816 . - . ID=g528.t1.1.5b6be70b.exon4;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . CDS 24739 24816 . - 0 ID=cds.g528.t1.1.5b6be70b;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . exon 24033 24373 . - . ID=g528.t1.1.5b6be70b.exon5;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . CDS 24248 24373 . - 0 ID=cds.g528.t1.1.5b6be70b;Parent=g528.t1.1.5b6be70b NODE_212_length_31301_cov_45.3235 . three_prime_UTR 24033 24247 . - . ID=g528.t1.1.5b6be70b.utr3p1;Parent=g528.t1.1.5b6be70b #PROT g528.t1 g528 MMKSVVFLLALVSVAFAAENTGRLVAVKTLLNEILVEGKDLTMVYHLFNVGSGPALEVSLEESGFPTEFFTPIAGLQTAHWERIAPNTNVTHSVIVRPIAAGYYNFTAARVSYRPNEDSEFVQTGLTSSLGQAAFMRSKDYDVKYAPHWVQWGYFAILAIFPVVVPFFLWYSSYAKYEAIGSQLTKTKRS* #PROT g528.t1.1.5b6be70b g528 MRTLIKHFSLGILERFILIYWRNKNTHNKFINPIQMKSVVFLLALVSVAFAAENTGRLVAVKTLLNEILVEGKDLTMVYHLFNVGSGPALEVSLEESGFPTEFFTPIAGLQTAHWERIAPNTNVTHSVIVRPIAAGYYNFTAARVSYRPNEDSEFVQTGLTSSLGQAAFMRSKDYDVKYAPHWVQWGYFAILAIFPVVVPFFLWYSSYAKYEAIGSQLTKTKRS* # ORIGINAL: g526.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 17828 19646 . - . ID=g526;Name=g526.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 17828 19646 . - . ID=g526.t1;Parent=g526;Name=g526.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 18905 19646 . - . ID=g526.t1.exon1;Parent=g526.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 18905 19646 . - 0 ID=cds.g526.t1;Parent=g526.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 17828 18723 . - . ID=g526.t1.exon2;Parent=g526.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 17828 18723 . - 2 ID=cds.g526.t1;Parent=g526.t1 #PROT g526.t1 g526 MSSTASATASAVASATASATASVLASAAPTTTADSSGALPAVAVFAFDTGDIAWILVSTALVLFMTPGLALFYGGMVRTKSALDIMMQSLIAMCVISVQWFVLGYTLSFSKGNAVIGDLHKIVLVGVEYKQPHPDGLGATIPEQLFMLYQCMFAIICPALITGATADRMRFRTYLVFIVLWATIVYDPFAHMVWHPNGWLAKKGVLDFAGGIVVHVTAATSALVAAIILGKRDGFPDQPMPAHSPMLVLLGTGILWFGWFGFNAGSAVAANSQAVSAFCATHFGGAFGGVAWMAIEWIFHGKPTVMGACTGIVAGLATITPASGFVDPLPAMAIGVMASVIGYFGAHKVRVKFGYDDSLDVFAVHGMAAFFGVVATGVFANNDITAAVGVVIPGGWVNHYWKQVGWQLVGAVVAASWSAVATAALLLCLDKIPGLGLRVPVEGERIGMDIYEHGELCYNYDGVVLGDNAVTPITKVAPASAPQAKEGWADASAHGNGIGNGNGHILGSQDDLESVKKSKKKRKVKREASKADSIGGHDVEVMEMA* # ORIGINAL: g521.t1 original gene structure, not modified by PASA NODE_212_length_31301_cov_45.3235 AUGUSTUS gene 240 2734 . + . ID=g521;Name=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS mRNA 240 2734 . + . ID=g521.t1;Parent=g521;Name=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 240 242 . + . ID=g521.t1.exon1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 240 242 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 400 498 . + . ID=g521.t1.exon2;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 400 498 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 595 691 . + . ID=g521.t1.exon3;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 595 691 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 846 1021 . + . ID=g521.t1.exon4;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 846 1021 . + 2 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 1279 1401 . + . ID=g521.t1.exon5;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 1279 1401 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 1587 1763 . + . ID=g521.t1.exon6;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 1587 1763 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 1980 2093 . + . ID=g521.t1.exon7;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 1980 2093 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 2269 2379 . + . ID=g521.t1.exon8;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 2269 2379 . + 0 ID=cds.g521.t1;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS exon 2627 2734 . + . ID=g521.t1.exon9;Parent=g521.t1 NODE_212_length_31301_cov_45.3235 AUGUSTUS CDS 2627 2734 . + 0 ID=cds.g521.t1;Parent=g521.t1 #PROT g521.t1 g521 MAEPLRVVVTGAAGQIAYSLLYNIARGDIFGTHQPLILHLLDIAPCMEAVKGVVMELEDCSIPLVKGLVATSDPNEAFKDVDVAILVGAMPRKEGMDRKDLLKANAGIFRVQGKAIDTYAKKTVKVLVVGNPANTNALITMSSAPSIPRENFTALTRLDHNRAIAQIALRLKLTPNEVKNVIIWGNHSNTQYPDAWHASATINGETKKAREAINDDAWLKGDFMQTVQTRGGAVIKARKLSSAMSAAKAIVDHMHDWWNGTKEGEWVSMAVPSDGSYGIKEGIIFSYPVRIKNHKYEIVQGLPIDEFSQQKLDATAAELFGEREDAKDFLVPISD* # PASA_UPDATE: g6349.t1, single gene model update, valid-1, status:[pasa:asmbl_6025,status:12], valid-1 NODE_3405_length_3546_cov_42.4685 . gene 2787 3435 . + . ID=g6349;Name=g6349.t1 NODE_3405_length_3546_cov_42.4685 . mRNA 2787 3435 . + . ID=g6349.t1;Parent=g6349;Name=g6349.t1 NODE_3405_length_3546_cov_42.4685 . five_prime_UTR 2787 2799 . + . ID=g6349.t1.utr5p1;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . exon 2787 2858 . + . ID=g6349.t1.exon1;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . CDS 2800 2858 . + 0 ID=cds.g6349.t1;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . exon 3130 3262 . + . ID=g6349.t1.exon2;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . CDS 3130 3262 . + 1 ID=cds.g6349.t1;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . exon 3403 3435 . + . ID=g6349.t1.exon3;Parent=g6349.t1 NODE_3405_length_3546_cov_42.4685 . CDS 3403 3435 . + 0 ID=cds.g6349.t1;Parent=g6349.t1 #PROT g6349.t1 g6349 MAGEKYNVCVVGSSNVDLTAYVPRLPKPGETVHGTRFKQDFGGKGANQCVMVAKLGGQVAMVTKAAVTVRLVLL* # ORIGINAL: g6348.t1 original gene structure, not modified by PASA NODE_3405_length_3546_cov_42.4685 AUGUSTUS gene 1127 1669 . - . ID=g6348;Name=g6348.t1 NODE_3405_length_3546_cov_42.4685 AUGUSTUS mRNA 1127 1669 . - . ID=g6348.t1;Parent=g6348;Name=g6348.t1 NODE_3405_length_3546_cov_42.4685 AUGUSTUS exon 1127 1669 . - . ID=g6348.t1.exon1;Parent=g6348.t1 NODE_3405_length_3546_cov_42.4685 AUGUSTUS CDS 1127 1669 . - 0 ID=cds.g6348.t1;Parent=g6348.t1 #PROT g6348.t1 g6348 MVDVSALGGVHRLELFACSRLRDVSALGSVHTLDLSGCTGVVDVAALGGIHTLNLSGCTGVVDVSALGGIHTLNLSGCTGVVDVSALGGIHTLNLSGCTGVVDVSALGGIHTLNLSGCTGVVDVSALGSVHTLDLSSCTGVVDVAALGGVHTLDLSGCNGVVDVSSLDGIHALNLSGMND* # ORIGINAL: g10968.t1 original gene structure, not modified by PASA NODE_577_length_20884_cov_40.9621 AUGUSTUS gene 18251 19823 . + . ID=g10968;Name=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS mRNA 18251 19823 . + . ID=g10968.t1;Parent=g10968;Name=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 18251 18357 . + . ID=g10968.t1.exon1;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 18251 18357 . + 0 ID=cds.g10968.t1;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 18576 18668 . + . ID=g10968.t1.exon2;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 18576 18668 . + 1 ID=cds.g10968.t1;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 18940 19056 . + . ID=g10968.t1.exon3;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 18940 19056 . + 1 ID=cds.g10968.t1;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 19371 19428 . + . ID=g10968.t1.exon4;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 19371 19428 . + 1 ID=cds.g10968.t1;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 19617 19823 . + . ID=g10968.t1.exon5;Parent=g10968.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 19617 19823 . + 0 ID=cds.g10968.t1;Parent=g10968.t1 #PROT g10968.t1 g10968 MLVPHRLTGDGVEDHMATNHLGHFAMTTALLPILHRSSTPSRRSRVVIVASEAHRRGSIDFEDMEGRKLANVMHCRSLARKSASSMYPDVDYVSVHPGIVFSGLYRHLWWPLEMVYNTAAPWMLMSCEAGARTVVNAALANPVHSGAYFNCFAEESPHASAESIELQELLWDWSTQKVQQYACGGRAGVASQQ* # PASA_UPDATE: g10961.t1, single gene model update, valid-1, status:[pasa:asmbl_8276,status:12], valid-1 NODE_577_length_20884_cov_40.9621 . gene 287 843 . - . ID=g10961;Name=g10961.t1 NODE_577_length_20884_cov_40.9621 . mRNA 287 843 . - . ID=g10961.t1;Parent=g10961;Name=g10961.t1 NODE_577_length_20884_cov_40.9621 . five_prime_UTR 817 843 . - . ID=g10961.t1.utr5p1;Parent=g10961.t1 NODE_577_length_20884_cov_40.9621 . exon 608 843 . - . ID=g10961.t1.exon1;Parent=g10961.t1 NODE_577_length_20884_cov_40.9621 . CDS 608 816 . - 0 ID=cds.g10961.t1;Parent=g10961.t1 NODE_577_length_20884_cov_40.9621 . exon 287 483 . - . ID=g10961.t1.exon2;Parent=g10961.t1 NODE_577_length_20884_cov_40.9621 . CDS 287 483 . - 1 ID=cds.g10961.t1;Parent=g10961.t1;3_prime_partial=true #PROT g10961.t1 g10961 MAARGASISGVWRMGLRPPLLSAHRQSVTRRLLHPAVLHMPVSRTLFGLANPFSSAPMDPVTHSERKVLGYSSQQVYDVVSNVEKYRDFVPWVKESVTLSRGKDSLVAELVVGFPPVLERYQSSVTLKPTYYVQV # PASA_UPDATE: g10966.t1, single gene model update, valid-1, status:[pasa:asmbl_8275,status:3], valid-1 NODE_577_length_20884_cov_40.9621 . gene 10267 11554 . + . ID=g10966;Name=g10966.t1 NODE_577_length_20884_cov_40.9621 . mRNA 10267 11554 . + . ID=g10966.t1;Parent=g10966;Name=g10966.t1 NODE_577_length_20884_cov_40.9621 . five_prime_UTR 10267 10344 . + . ID=g10966.t1.utr5p1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . exon 10267 10455 . + . ID=g10966.t1.exon1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . CDS 10345 10455 . + 0 ID=cds.g10966.t1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . exon 10655 10864 . + . ID=g10966.t1.exon2;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . CDS 10655 10864 . + 0 ID=cds.g10966.t1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . exon 11040 11132 . + . ID=g10966.t1.exon3;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . CDS 11040 11132 . + 0 ID=cds.g10966.t1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . exon 11338 11554 . + . ID=g10966.t1.exon4;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . CDS 11338 11454 . + 0 ID=cds.g10966.t1;Parent=g10966.t1 NODE_577_length_20884_cov_40.9621 . three_prime_UTR 11455 11554 . + . ID=g10966.t1.utr3p1;Parent=g10966.t1 #PROT g10966.t1 g10966 MLPEAASGTSLKGLSKRDAYKEMLDQVQAVLHGERNYIANLSNAAAIIYHGLNGREDAPVNWAGFYLKDHSKDNELVLGPFQGKVACVRIRFGRGVCGTAAQSLKTQLVPNVHDFPGHIACDSASNSEVVVPIVRGNGDVLGVLDLDSSVVNGFDIEDQQGLEAIVVVLVSGCDWP* # ORIGINAL: g10967.t1 original gene structure, not modified by PASA NODE_577_length_20884_cov_40.9621 AUGUSTUS gene 12780 16430 . + . ID=g10967;Name=g10967.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS mRNA 12780 16430 . + . ID=g10967.t1;Parent=g10967;Name=g10967.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 12780 16430 . + . ID=g10967.t1.exon1;Parent=g10967.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 12780 16430 . + 0 ID=cds.g10967.t1;Parent=g10967.t1 #PROT g10967.t1 g10967 MASLRLLFVFALIAALCAGTVRAIRDDPLDHVDVRNVDDNGPEAEPSSAIYGGTADDSSAAAFSREPSAVPTVTAVPIEHHYCTPNPCGQNFACEESIDGFTCICDGNIRVDNDACPPSNNTVCSGSNPCGSGTCIPLSTPGEYICDCGSRGVVYNEPCPNILACDAKPCKNGGLCIDLGNYYICNCLDGFEGLNCELALDSHSPLPPHPSTAGPEPSITDVPPEPVSSSATPAESSSQAPLPESPCKNNPCKPGVCIPDDAPEYQPEGYYCLCGADFSTISKGYCVDKCQNFHCHNNGECAINSEDQPYCVCPLPYAGVTCDEILLGCNDAHPCLNGGVCIGGGNSTTDSSSAPMPSHSAHPDDNSTTIGFCECPPQWEGVFCQTDVNECLVNTTCKNGGICNNLDGDFECECPIGWDGKDCSILHDFCDDLNPCQHGTCFAKYRTYWCACDAGYIGVNCETQYVGTDTISLRGNSFVKQILPEPGVLDVFSTYTITLKLKAKQPDGLIFYADGNGKSVDYFSLELVDGQLVGLVRGGNSVASLLPQPFAVRVDDSQEYEVTFSFHSGVARLKVASFVVTKSIAAQAIYLTRQYYFGGVEDDKSGPFVTGANFQGCLSNVVLNGVPLQQISGLYGKTDAKGKFSNTCPYDIGHFNGSATAYFYPELFGDNFYLDFVFRTTKTEGTIFATGTKTSRVGQVNILAIGDGHIFTQEGRSVEEGSVYIADGQWHSISISDPDDDGYIWVSVDDGVEYYPAFDTYVVPTNDDFFNFGGTWGPDQGTHVPFVGEIALIVFNITQPVYFDDTDFVTMSGVSNIIPAPATVSFPGADSYMRFVSSTFAPGSTGTMSFDLRTGIKNQILFVSNGQALPANKPGAVRPFWVVEILDGDLTWSFNAGNDTTVVRFAGRNVADLNWHSIQLSRNGNQGFLTIDNLQVQASSTSTALTFTGLTDLYVGGSPANVRVGTTAQASYQGCMKDITINGAPLRLDLATRVQGAIDQSCDVEKRSFDGTGYAWFAQRGVQIGNFFSASLFFRTQQTGSATLLYAANPALNSFVAIVLHDGNVQVRYRYANMTQAQGTGQQGPGQRLYEVLDPLDEYFDPIDTTNAPLNDGNWHEVSVSITSDSLSIDVDHGFYSNTIPIPSWWNLVSTTGVYFAGTSPNVPVFSISSPLNGCIQDIVVNGEVLQFTRATSLIKASRLCKVSSEPDILLGGPEE* # ORIGINAL: g10965.t1 original gene structure, not modified by PASA NODE_577_length_20884_cov_40.9621 AUGUSTUS gene 8364 9561 . - . ID=g10965;Name=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS mRNA 8364 9561 . - . ID=g10965.t1;Parent=g10965;Name=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 9187 9561 . - . ID=g10965.t1.exon1;Parent=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 9187 9561 . - 0 ID=cds.g10965.t1;Parent=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 8883 8982 . - . ID=g10965.t1.exon2;Parent=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 8883 8982 . - 0 ID=cds.g10965.t1;Parent=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 8364 8794 . - . ID=g10965.t1.exon3;Parent=g10965.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 8364 8794 . - 2 ID=cds.g10965.t1;Parent=g10965.t1 #PROT g10965.t1 g10965 MSEVYSVAFSPDGRTVATGSAECTVRVWDATTGSQIEVRQESVDGSKWMRSSRDGSTSASLSGCDVILTHDIAVWEERLKREKEEAERLKRQKKEQKGLNREKEVEERAEADRKGASERTVDLVEHMEATEAALDAAQDAWELWGWWRGCVGRSSHVMLTCATGRCGGNGGKVAVRLSAEAEWAVAVDNDSGSDADDATLSPSLHSLDSEYYAAVDSVDEAELARLGAQYEAKRAAGQGCIPLGRAGAAGVRQSTSTQPTTANHELLVKVAEMTLKTAKARMGGLVTQLTCIGQSLFPELH* # ORIGINAL: g10964.t1 original gene structure, not modified by PASA NODE_577_length_20884_cov_40.9621 AUGUSTUS gene 6385 7992 . - . ID=g10964;Name=g10964.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS mRNA 6385 7992 . - . ID=g10964.t1;Parent=g10964;Name=g10964.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 6385 7992 . - . ID=g10964.t1.exon1;Parent=g10964.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 6385 7992 . - 0 ID=cds.g10964.t1;Parent=g10964.t1 #PROT g10964.t1 g10964 MRELLRGIEYVHREGIVHRDIKVQNVFVAEDGRPVLGDFDISKSNDDRQMESTVSMTVVAFTVAYAAPEVIRREPSTTASDMYAFDLILYDVHFPDKRRAEKCSFTGHVAPLTIPLIKGHAVELRDLIARFTVPDARTRPSAAVALTHPYFTDAYVSVQEEAVDALIALRSAREEAEAMQRDVAAARLRVEEAERVANADRRSVIAAKEDLDAKERELRAHMKRARASQAEANKRMNEAGRVLHLCKPPSYWDLTDASAVGVRRVDVTATMSVTIQALMTETCIASDLGIGRDARPGNHSRLVVERVHRIENGRLWRTYALRRDLVAERPDMASTRVATHRDWQARDLHAHAGANEVFLWHGTKPSLVGIIERERFDERVCELNGLFGAGVYFAEHSSKSDQDTFDRRAGNSTFSMFLCRVALGRTVTITENARGARRPPPLNGANGATADSAVANCMRKNAHWHVPAHAGRALSDTASLLCTTDPSAIPSFLSSTGRSDVAIWNMLLCCDECHTVSIYRRNNATINCRLNANVR* # PASA_UPDATE: g10962.t1, single gene model update, valid-1, status:[pasa:asmbl_8274,status:12], valid-1 NODE_577_length_20884_cov_40.9621 . gene 1123 3889 . + . ID=g10962;Name=g10962.t1 NODE_577_length_20884_cov_40.9621 . mRNA 1123 3889 . + . ID=g10962.t1;Parent=g10962;Name=g10962.t1 NODE_577_length_20884_cov_40.9621 . five_prime_UTR 1123 1233 . + . ID=g10962.t1.utr5p1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 1123 1355 . + . ID=g10962.t1.exon1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 1234 1355 . + 0 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 1492 1795 . + . ID=g10962.t1.exon2;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 1492 1795 . + 1 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 2012 2097 . + . ID=g10962.t1.exon3;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 2012 2097 . + 0 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 2351 2529 . + . ID=g10962.t1.exon4;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 2351 2529 . + 1 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 2815 2951 . + . ID=g10962.t1.exon5;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 2815 2951 . + 2 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 3217 3297 . + . ID=g10962.t1.exon6;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 3217 3297 . + 0 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . exon 3540 3889 . + . ID=g10962.t1.exon7;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . CDS 3540 3716 . + 0 ID=cds.g10962.t1;Parent=g10962.t1 NODE_577_length_20884_cov_40.9621 . three_prime_UTR 3717 3889 . + . ID=g10962.t1.utr3p1;Parent=g10962.t1 #PROT g10962.t1 g10962 MGRQKKGKGPGRTDPKTSSKASLRPLKTKDTKYTAEDLLERVDDYLEQCDFQLAYQFCERALKLEPTNPRALESMGVIMLELPNAEGAYQCLTKAVEVDPEGSFTKYLYLAQLQQGADAVASFHKGIQLMTAEHQSALQSEPPSEEEAKDLASRIATAFCSIAEIYMSDLCFEENAEATCEEAVTHALTWDAGSPEALQTKASLLISQQRPEEAKEFIRRSVAVWHNKADEDIEEGRLPPYDARVATARILMELGENELAGSVLDRLLLEDDEVVEVWYLIGWNAYLTNEKPNAKALLKKTKELYVRYECDDTQLLQHVEELLGEMAEVEDVDLDEDEDAGSDGDENGYGTDDDDDTAMEQ* # ORIGINAL: g10963.t1 original gene structure, not modified by PASA NODE_577_length_20884_cov_40.9621 AUGUSTUS gene 4144 5160 . - . ID=g10963;Name=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS mRNA 4144 5160 . - . ID=g10963.t1;Parent=g10963;Name=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 4830 5160 . - . ID=g10963.t1.exon1;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 4830 5160 . - 0 ID=cds.g10963.t1;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 4615 4731 . - . ID=g10963.t1.exon2;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 4615 4731 . - 2 ID=cds.g10963.t1;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 4339 4484 . - . ID=g10963.t1.exon3;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 4339 4484 . - 2 ID=cds.g10963.t1;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS exon 4144 4221 . - . ID=g10963.t1.exon4;Parent=g10963.t1 NODE_577_length_20884_cov_40.9621 AUGUSTUS CDS 4144 4221 . - 0 ID=cds.g10963.t1;Parent=g10963.t1 #PROT g10963.t1 g10963 MASSLPPPYVSVVECKQSTHYGPDALVFRAPYVMEIPHDAVKLIDCVLTPSAIAAMQSKCSGRIVAIASLRTNSTKMLVRGIVVPAIMVLFSPIAIITTTLATIFGLKRKHVMDNSYIVVTEREVMWYFCEPNKPLTQKAKIITYDELHHAKVSKAVMMAPYKKIGFVTVDQERKFDKKGNEKTGANIKFNGGTKDQMAEIVGYVSRCKRQYDTQKNAVAYAR* # PASA_UPDATE: g9582.t1, single gene model update, valid-1, status:[pasa:asmbl_8298,status:12], valid-1 NODE_580_length_20732_cov_43.6443 . gene 109 2535 . - . ID=g9582;Name=g9582.t1 NODE_580_length_20732_cov_43.6443 . mRNA 109 2535 . - . ID=g9582.t1;Parent=g9582;Name=g9582.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 2343 2535 . - . ID=g9582.t1.utr5p1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 2267 2535 . - . ID=g9582.t1.exon1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 2267 2342 . - 0 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 2061 2122 . - . ID=g9582.t1.exon2;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 2061 2122 . - 2 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 1732 1888 . - . ID=g9582.t1.exon3;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 1732 1888 . - 0 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 1321 1562 . - . ID=g9582.t1.exon4;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 1321 1562 . - 2 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 1139 1209 . - . ID=g9582.t1.exon5;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 1139 1209 . - 0 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 662 828 . - . ID=g9582.t1.exon6;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 662 828 . - 1 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 313 446 . - . ID=g9582.t1.exon7;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 313 446 . - 2 ID=cds.g9582.t1;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . exon 109 194 . - . ID=g9582.t1.exon8;Parent=g9582.t1 NODE_580_length_20732_cov_43.6443 . CDS 109 194 . - 0 ID=cds.g9582.t1;Parent=g9582.t1;3_prime_partial=true #PROT g9582.t1 g9582 MTLGVSDLIAEAGRKRFSRTTVSQEEMLKIWDRVGGFIELQMAQNKGVAIPTLGSLSFARTKLEIGNKGQKVIQRPVFILSEGFASTFNMHHTKQRASGAIPVCDLNMSQIATELGFTRDDIQSTIKEVVHMFGLACARGVEASLGFRDFARVTCRNGRVEGSFSQAFIDSYNGGESTASYRSPSPQKSLAPARLPPLEGRTSPHRADADVPVPVPIHTHHVTLGGGDDASGRSVRFEGSEPAPRHADNRPPSRADHQGAGEPESHATTNAGHVHRSILVKGSSLLPRRQIHNPEYAKALEEQIIYQKGVSTKLKEEEEAYDRAVLAQLEG # PASA_UPDATE: g9586.t1, single gene model update, valid-1, status:[pasa:asmbl_8303,status:12], valid-1 NODE_580_length_20732_cov_43.6443 . gene 14376 17698 . + . ID=g9586;Name=g9586.t1 NODE_580_length_20732_cov_43.6443 . mRNA 14376 17698 . + . ID=g9586.t1;Parent=g9586;Name=g9586.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 14376 14474 . + . ID=g9586.t1.utr5p1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 14376 14680 . + . ID=g9586.t1.exon1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 14475 14680 . + 0 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 14850 14992 . + . ID=g9586.t1.exon2;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 14850 14992 . + 1 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 15236 15406 . + . ID=g9586.t1.exon3;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 15236 15406 . + 2 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 15613 15796 . + . ID=g9586.t1.exon4;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 15613 15796 . + 2 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 16099 16289 . + . ID=g9586.t1.exon5;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 16099 16289 . + 1 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 16469 16675 . + . ID=g9586.t1.exon6;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 16469 16675 . + 2 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 16951 17104 . + . ID=g9586.t1.exon7;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 16951 17104 . + 2 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . exon 17447 17698 . + . ID=g9586.t1.exon8;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . CDS 17447 17546 . + 1 ID=cds.g9586.t1;Parent=g9586.t1 NODE_580_length_20732_cov_43.6443 . three_prime_UTR 17547 17698 . + . ID=g9586.t1.utr3p1;Parent=g9586.t1 #PROT g9586.t1 g9586 MNGRAFFVLVALVACAYAAPYGHNSEVIVPLPPYCGNQPRDGHGWGVAPPPAEAAGEKLELKQVQTIIRHGDRTSWIGSQCWANDTAVWSCSLDYASIPSLDRSQSTVAVPRLFRKVYLDGDEVYAGNCAVGQLTQRGYHQEVLNGRDLRTAYVDTGFLASKFNPRETFLRSDDEPRTVQSLQSLILGMFPVDEFEGDDENDYKAPVEEGDVAVAEVIDIHTMDLNLDDMEPKPSVCPKWGAFQTALVNSTAYKHHIETVTAPLLKSIAAAMGIESVSDPVALHDCFNVHVCHKYPLPGGVSKEMYDALMKEVTWQTYQQYMFPDPNSNAQAGIGFLLRDVIKQLESKVRGTDEAYKFVLLSGHDTTIMPLLRAFGADDGLWSPYASMVSVELYERTVKPIPYQDSHAVRFVYNGKVIKLPFCGGSDLCEYSTFVAHARALLPSGNAADCQ* # PASA_UPDATE: g9584.t1, single gene model update, valid-1, status:[pasa:asmbl_8302,status:3], valid-1 NODE_580_length_20732_cov_43.6443 . gene 8998 11529 . + . ID=g9584;Name=g9584.t1 NODE_580_length_20732_cov_43.6443 . mRNA 8998 11529 . + . ID=g9584.t1;Parent=g9584;Name=g9584.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 8998 9217 . + . ID=g9584.t1.utr5p1;Parent=g9584.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 9448 9639 . + . ID=g9584.t1.utr5p2;Parent=g9584.t1 NODE_580_length_20732_cov_43.6443 . exon 8998 9217 . + . ID=g9584.t1.exon1;Parent=g9584.t1 NODE_580_length_20732_cov_43.6443 . exon 9448 11529 . + . ID=g9584.t1.exon2;Parent=g9584.t1 NODE_580_length_20732_cov_43.6443 . CDS 9640 11271 . + 0 ID=cds.g9584.t1;Parent=g9584.t1 NODE_580_length_20732_cov_43.6443 . three_prime_UTR 11272 11529 . + . ID=g9584.t1.utr3p1;Parent=g9584.t1 #PROT g9584.t1 g9584 MVANVPCFVATSGSTVPQSVVEQMEPMQPMGYANQGTDSAERVHAAAVASRVVHLYFTASRLGWDSQQCMHLGGDGGRFKPVLRPGAVDALAGLNDCDVTVISDITMRLIATPAGQSTTADADTQFRILKLASMIFEDETTNCDQAQLDPSANAWEMSADGIHDDELFSTRTWSGTSDGSADFGPTAAELPSRDAMYRMPTLVHADHADADAAGEYHFAAALRQAVYAAAATQKPHELHDDDTIASPFDQQCVGSAGSDSLSPSSSSTTSNDATDPFSDKGKLAQIAVHGSISQAGPVCPFCTRTADGPPPCYRDLTRHLFCHLDGFVENGLSGQEVLSLFHRLRYGDHPGTTDTRQFWQKYYAGLGIDADASDRMDHMGVTIDEIIAAGKQLSLDSVPGRKSSIFACKSAPRGTTAEDCVARVLSTMQYLGREAKSRATKRYSAATEAPLSFQRFVSIGWDDTLAALDSIKSGRSRAISRQQSMSDTVGVGIVAVSPVTQTGAKTARRLSASGQCAIQKKVAAAVRAATAATAAGVASDKRN* # PASA_UPDATE: g9583.t1, single gene model update, valid-1, status:[pasa:asmbl_8301,status:12], valid-1 NODE_580_length_20732_cov_43.6443 . gene 3014 7696 . + . ID=g9583;Name=g9583.t1 NODE_580_length_20732_cov_43.6443 . mRNA 3014 7696 . + . ID=g9583.t1;Parent=g9583;Name=g9583.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 3014 3271 . + . ID=g9583.t1.utr5p1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 3014 3449 . + . ID=g9583.t1.exon1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 3272 3449 . + 0 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 3657 3739 . + . ID=g9583.t1.exon2;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 3657 3739 . + 2 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 3916 4027 . + . ID=g9583.t1.exon3;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 3916 4027 . + 0 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 4283 4335 . + . ID=g9583.t1.exon4;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 4283 4335 . + 2 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 4578 4751 . + . ID=g9583.t1.exon5;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 4578 4751 . + 0 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 4868 5457 . + . ID=g9583.t1.exon6;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 4868 5457 . + 0 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 5776 5994 . + . ID=g9583.t1.exon7;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 5776 5994 . + 1 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 6293 6776 . + . ID=g9583.t1.exon8;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 6293 6776 . + 1 ID=cds.g9583.t1;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . exon 6983 7696 . + . ID=g9583.t1.exon9;Parent=g9583.t1 NODE_580_length_20732_cov_43.6443 . CDS 6983 7696 . + 0 ID=cds.g9583.t1;Parent=g9583.t1 #PROT g9583.t1 g9583 MMFDAPPTPQPQLLSVESASDDHRKLYEGRPRLKSDRREAKQKSNWVNVNKVEDQLRLVAKRLECTPGFDGDDVGLVEDLGLAIKDLENIVEDLKGAMEANVIQVCGLRHRLDHLPGEKKREEITSLDAVRNSMQPAIDQLKIQLEALHGECEMLEIRRNTTDKEVGRVRDSHKLSVANFEGLIEVWNEELASKANLQIKVNETRDSILSCRRKMEAYDAKTTKELSAINAEREVAMTTRRDLETRLSAKKEVLAREQAERAACRKARRELETQLGDLTNRYSGEQRMATMLSKDIASFDAMSTKLNVELGRSVADAAALAEKNRRTEEETVAIQREYEAFNEAMEAKCVAKNAELKDSMGENQSLASACHNLRVEIMTWKSKSSEEEKAMKIMKARLTGTLEKLQLQTEECAARNDENAQLMMKMEDMKETQRKKELAMDSKIEDMKRRLELERQTILTLQGELDLALKEHEVYENDLKTQLRMANDTIDDQRRTRKRLQEENESQMVTLVERETTLVDLKGQERKTRKMLTETRESLSSELAKLETGLMGLRKDHAKHTMLSRERAAEIVTLEAQRDELNVEHDQVTAHVSVLDDERFQLKVAIDNLELDLKRTVQERVRMESDFEELKVQTQEKDADALVAKEKVREELTVARMRLEAAALRADRSAQSMRSVEEKRKEMELRLVHHPKVTRTVKALAKRNERSIEAESDLRDEMLVEFRALGAEKIREIEEFKVEGERTDPQLRSINARFAREVKRFDACMRSLGGLPSEEEESMLLHAETENNNNNNNSTPGTAPAPPVDAPAAATTTAAVRAGEGLETIKEGTSEAAVAALGCVDGNATVGVTTSATAVEGVASAAANMHAH* # PASA_UPDATE: g9585.t1, single gene model update, valid-1, status:[pasa:asmbl_8300,status:12], valid-1 NODE_580_length_20732_cov_43.6443 . gene 12529 13806 . - . ID=g9585;Name=g9585.t1 NODE_580_length_20732_cov_43.6443 . mRNA 12529 13806 . - . ID=g9585.t1;Parent=g9585;Name=g9585.t1 NODE_580_length_20732_cov_43.6443 . five_prime_UTR 13585 13806 . - . ID=g9585.t1.utr5p1;Parent=g9585.t1 NODE_580_length_20732_cov_43.6443 . exon 12529 13806 . - . ID=g9585.t1.exon1;Parent=g9585.t1 NODE_580_length_20732_cov_43.6443 . CDS 12529 13584 . - 0 ID=cds.g9585.t1;Parent=g9585.t1 #PROT g9585.t1 g9585 MTITTMNAVAIRNYGSAEQLEAVVLPVPTPGAHDVLVKVAAVSVNPVDRKKRQNFGAAFDEATLFDQPLVLGWDASGSVTAVGSAVSLFSVGDEVFFAGSLIRPGSNAEYTLVDERIAAKKPQSLSHAESAAIPLVALTAWEALVDGMGIPIPSDASAHNNKKTKSILVISGAGGVGSFAIQIAKRVLGLRVIATASRPESRKYCLQNGADEVISHAEPLAEGLKAIGLTGVDYIFCTAGIADYIDQVVDIANPSGKIAAIDDDNLKPFDLSRLKLKRLTFHFELMFTRPIFGYELERQNEILSEVSRLLHAGVLKTTLTKTYAFSAQNLRQAHLDIESNRTIGKIALTLH* # ORIGINAL: g9587.t1 original gene structure, not modified by PASA NODE_580_length_20732_cov_43.6443 AUGUSTUS gene 18811 20585 . - . ID=g9587;Name=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS mRNA 18811 20585 . - . ID=g9587.t1;Parent=g9587;Name=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 20563 20585 . - . ID=g9587.t1.exon1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 20563 20585 . - 0 ID=cds.g9587.t1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 20207 20375 . - . ID=g9587.t1.exon2;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 20207 20375 . - 1 ID=cds.g9587.t1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 19887 19972 . - . ID=g9587.t1.exon3;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 19887 19972 . - 0 ID=cds.g9587.t1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 19473 19574 . - . ID=g9587.t1.exon4;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 19473 19574 . - 1 ID=cds.g9587.t1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 19095 19213 . - . ID=g9587.t1.exon5;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 19095 19213 . - 1 ID=cds.g9587.t1;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS exon 18811 18917 . - . ID=g9587.t1.exon6;Parent=g9587.t1 NODE_580_length_20732_cov_43.6443 AUGUSTUS CDS 18811 18917 . - 2 ID=cds.g9587.t1;Parent=g9587.t1 #PROT g9587.t1 g9587 MEWNLSMDSEHALLAFPGRSPGQVQLLDLAEAKGASHILPAHETQLSAIAFNLQGTRLATASEKGTLIRIFDTQSGRRLHELRRGADRAEIYCINFNHDSTMVCVSSDKATVHIFSLGDESLNKQSSLAPAKEFLPKYFSSAWSFAKFSVPEGPCVCAFGPDNTIVAICADGTCYKIVFNEKGECRRESYAHFLKMTDEEP* # ORIGINAL: g1151.t1 original gene structure, not modified by PASA NODE_2223_length_7179_cov_43.7258 AUGUSTUS gene 6027 7033 . - . ID=g1151;Name=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS mRNA 6027 7033 . - . ID=g1151.t1;Parent=g1151;Name=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS exon 6874 7033 . - . ID=g1151.t1.exon1;Parent=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS CDS 6874 7033 . - 0 ID=cds.g1151.t1;Parent=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS exon 6441 6616 . - . ID=g1151.t1.exon2;Parent=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS CDS 6441 6616 . - 2 ID=cds.g1151.t1;Parent=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS exon 6027 6062 . - . ID=g1151.t1.exon3;Parent=g1151.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS CDS 6027 6062 . - 0 ID=cds.g1151.t1;Parent=g1151.t1 #PROT g1151.t1 g1151 MMTPQLFINYKMQSVAHLPWRMLTYKALNTFIDDLFAFIIKMPTMHRLACFRDDIIFFVYVYQRWKYPVDTKRRNEFDGGDDVDDDDADEDNRQIAEIEGSPTAQAEGEARSAVKTEGEKKSD* # ORIGINAL: g1150.t1 original gene structure, not modified by PASA NODE_2223_length_7179_cov_43.7258 AUGUSTUS gene 4772 5779 . + . ID=g1150;Name=g1150.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS mRNA 4772 5779 . + . ID=g1150.t1;Parent=g1150;Name=g1150.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS exon 4772 5779 . + . ID=g1150.t1.exon1;Parent=g1150.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS CDS 4772 5779 . + 0 ID=cds.g1150.t1;Parent=g1150.t1 #PROT g1150.t1 g1150 MATSQGTPPASSVNIVLYVDNKAIHGSPNVIPPERPESEDAPLFMFATNSKVDAPYCWSVKNTYSNVVVHPKPDNDPADPETWPKIDLRLNVTLINKATMWLIFEFPWAVFMTCPVGTGDNVGECYLENDFQKRPKSYIKPAGEFVPGCARLKYKPDPPRDENTGNQITEDDGRLVAFRLAYIKFCRASDGSVTIQTVSYITRERGDHGAWLRSARISDVWKWVTNTAPHKPAEAVRRKMPNGDAAPPVTPADTTVVLAPSASNTTGLGPDLQGVALISAAMADMSLLADRPLEEFEAFTLEAPDPELQCAANQWVANTESTATAAAGLLFYYDG* # ORIGINAL: g1149.t1 original gene structure, not modified by PASA NODE_2223_length_7179_cov_43.7258 AUGUSTUS gene 1370 2899 . + . ID=g1149;Name=g1149.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS mRNA 1370 2899 . + . ID=g1149.t1;Parent=g1149;Name=g1149.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS exon 1370 2899 . + . ID=g1149.t1.exon1;Parent=g1149.t1 NODE_2223_length_7179_cov_43.7258 AUGUSTUS CDS 1370 2899 . + 0 ID=cds.g1149.t1;Parent=g1149.t1 #PROT g1149.t1 g1149 MNFSVARILMARAGTARASSMLSLTIATRTSRWSSSNRPLALQNAPIVFRCASYQTDAVLTDSQLASVPAANTADEKPRKATKPRKSKAIANDPSPLKEVEVSSVARFANDTEFASLAKTNTFAKAKEMFVATAPKSLDKAKQSTSEKKDAETIPSSEISNVDESPNVTRQARRPTRYSIRENDFIVSQVRQGKDWSHIANELGRTPESVRFHFANSLDERLKRGAFTTEEDDMIIHHVENVGPRYWGRLSALMWHTRSIKALQKRYEVIQPQRMKNPWTRENLMQLMRAIKLHGRDWKKVAVRVGDNRTPIECRYAARTAFKRADGGQKKGMRRFTPDENKILIDAIATHGRASWAHVASLLPRRSEEALSQQYAALAPPWVSAWYTSTVRTALRQALTEDGNVESKLAQFKDIYAAKGWVALELGMDDGSQVDWARVNGASGAERSAALDAVEKEIVPRVTAEEWKEGASAVWIPTWRWERPICTGRKAPIAAVAGHPSLAKFISSM* # PASA_UPDATE: g1148.t1, single gene model update, valid-1, status:[pasa:asmbl_3810,status:12], valid-1 NODE_2223_length_7179_cov_43.7258 . gene 302 757 . - . ID=g1148;Name=g1148.t1 NODE_2223_length_7179_cov_43.7258 . mRNA 302 757 . - . ID=g1148.t1;Parent=g1148;Name=g1148.t1 NODE_2223_length_7179_cov_43.7258 . five_prime_UTR 705 757 . - . ID=g1148.t1.utr5p1;Parent=g1148.t1 NODE_2223_length_7179_cov_43.7258 . exon 702 757 . - . ID=g1148.t1.exon1;Parent=g1148.t1 NODE_2223_length_7179_cov_43.7258 . CDS 702 704 . - 0 ID=cds.g1148.t1;Parent=g1148.t1 NODE_2223_length_7179_cov_43.7258 . exon 302 490 . - . ID=g1148.t1.exon2;Parent=g1148.t1 NODE_2223_length_7179_cov_43.7258 . CDS 302 490 . - 0 ID=cds.g1148.t1;Parent=g1148.t1;3_prime_partial=true #PROT g1148.t1 g1148 MNYNYSQPPVAGGYGGGPAYGGYGNPNQYTRVTYTANPNFVQRVGNSMCGFIFGLLVLTAAFPL # ORIGINAL: g7354.t1 original gene structure, not modified by PASA NODE_634_length_19910_cov_41.0688 AUGUSTUS gene 4338 9380 . + . ID=g7354;Name=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS mRNA 4338 9380 . + . ID=g7354.t1;Parent=g7354;Name=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 4338 4400 . + . ID=g7354.t1.exon1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 4338 4400 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 4507 4547 . + . ID=g7354.t1.exon2;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 4507 4547 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 4851 4934 . + . ID=g7354.t1.exon3;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 4851 4934 . + 1 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 5189 5267 . + . ID=g7354.t1.exon4;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 5189 5267 . + 1 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 5738 5893 . + . ID=g7354.t1.exon5;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 5738 5893 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 6680 6793 . + . ID=g7354.t1.exon6;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 6680 6793 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 7060 7182 . + . ID=g7354.t1.exon7;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 7060 7182 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 7559 7744 . + . ID=g7354.t1.exon8;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 7559 7744 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 7961 8115 . + . ID=g7354.t1.exon9;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 7961 8115 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 8335 8563 . + . ID=g7354.t1.exon10;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 8335 8563 . + 1 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 8697 8771 . + . ID=g7354.t1.exon11;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 8697 8771 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 9060 9380 . + . ID=g7354.t1.exon12;Parent=g7354.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 9060 9380 . + 0 ID=cds.g7354.t1;Parent=g7354.t1 #PROT g7354.t1 g7354 MGKKQHQKDKLYLTTTEWKNDWGGKKDKAEGGFRRLPFDHCALSLQPFEHPMCADDGTVYDITNIVPFIKKYGINPATGEKLDPKSLVKLNFSKNAAGEYHCPVTYKVFNEHSHIVAIRTTGNVYSFDAVDRLNVKAKNWKDLLTDEPFVRRDIITISDPTDTTKRNINTFHHVKNNIKLTEDAGSAQNKIRHVNAETSQALAELYATYKEPERAKADTGPVSNVSAHFSTNAVAGSFTSTAAVPVTINSSALVDVDTVRYAAVKGKGYVRVTTNLGELNLELFCQQVPRTCDNFIQLATRGYYNNTTFHRSIKHFMIQGGDPTGTGRGGESAWVVPFKDEFKKGLNHTDRGILSMANRGPHTNTSQFFITYRPAPALDGKHTVFGRLVGGMETLAAMERVAVDDADKPKEPIQIISVQVFVNPFDALKEEEAAKAEADRQLADAERNRATALAASSRQQQTYKEGVGKYIAPATQALTAPGAQGPPGHVAAGQGTMKRKARDDDDVDGNDVGIPSAVSTAQPKSKKTAVAKSGFGDFSAW* # PASA_UPDATE: g7353.t1, single gene model update, valid-1, status:[pasa:asmbl_8597,status:12], valid-1 NODE_634_length_19910_cov_41.0688 . gene 115 3500 . - . ID=g7353;Name=g7353.t1 NODE_634_length_19910_cov_41.0688 . mRNA 115 3500 . - . ID=g7353.t1;Parent=g7353;Name=g7353.t1 NODE_634_length_19910_cov_41.0688 . five_prime_UTR 3406 3500 . - . ID=g7353.t1.utr5p1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 3303 3500 . - . ID=g7353.t1.exon1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 3303 3405 . - 0 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 2928 3142 . - . ID=g7353.t1.exon2;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 2928 3142 . - 2 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 2625 2747 . - . ID=g7353.t1.exon3;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 2625 2747 . - 0 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 2050 2253 . - . ID=g7353.t1.exon4;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 2050 2253 . - 0 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 1844 1911 . - . ID=g7353.t1.exon5;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 1844 1911 . - 0 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 1451 1615 . - . ID=g7353.t1.exon6;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 1451 1615 . - 1 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 1049 1102 . - . ID=g7353.t1.exon7;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 1049 1102 . - 1 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 658 776 . - . ID=g7353.t1.exon8;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 658 776 . - 1 ID=cds.g7353.t1;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . exon 115 376 . - . ID=g7353.t1.exon9;Parent=g7353.t1 NODE_634_length_19910_cov_41.0688 . CDS 115 376 . - 2 ID=cds.g7353.t1;Parent=g7353.t1;3_prime_partial=true #PROT g7353.t1 g7353 MPHVTDWIADYAAHKVFHQSLKEKSEGNYDKFLTVCVESDGSLQDKPEYRRIVLAFLARSAVKSDPAKAEEVGGLEGLLTTFPSAPAEDKGPTSEYFALELDIRTQAAMTRVLTGAHFDAALGRLFPAKDTVPDGASADDVTKHGMLIERKHKLALYRAIVAGGGAAKKGDAQAKRNADFVKQFRQTHTYADLLKRLLAFLAPMEAALPTPFLALAKQGKIPASMIAHDPSVAAENARVRRDQLVQIFEGAYQGDCRDLILARPPDAPADAGRPADDVAQRVKQLISLSKSLKGKGKDPLDDISKGSPRKGVKRGRQEVDDEEAVGDSDAETQKQTQQAKKPTAASTPRPQLASPVRANNNNNAPGTPRSAAAASPASAQRGLNASGSRARRPWTSQEVDCLRRGVAEKGLGQWSQIRTAYLNVLASRTSVDIKDKW # ORIGINAL: g7357.t1 original gene structure, not modified by PASA NODE_634_length_19910_cov_41.0688 AUGUSTUS gene 16914 19254 . + . ID=g7357;Name=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS mRNA 16914 19254 . + . ID=g7357.t1;Parent=g7357;Name=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 16914 16935 . + . ID=g7357.t1.exon1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 16914 16935 . + 0 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 17175 17284 . + . ID=g7357.t1.exon2;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 17175 17284 . + 2 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 17425 17501 . + . ID=g7357.t1.exon3;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 17425 17501 . + 0 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 17673 17817 . + . ID=g7357.t1.exon4;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 17673 17817 . + 1 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 18091 18205 . + . ID=g7357.t1.exon5;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 18091 18205 . + 0 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 18331 18461 . + . ID=g7357.t1.exon6;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 18331 18461 . + 2 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 18724 18848 . + . ID=g7357.t1.exon7;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 18724 18848 . + 0 ID=cds.g7357.t1;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 19098 19254 . + . ID=g7357.t1.exon8;Parent=g7357.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 19098 19254 . + 1 ID=cds.g7357.t1;Parent=g7357.t1 #PROT g7357.t1 g7357 MSWPYPPPSAPSNFDADIVQMVANMSLQEKVGQMIQLDLSYILKTDAPAIDYDKLYWVVNTYFVGSFLNSPTSGGAWGSTANLSPDQWVDIINIIQTACTQTGNKIPMVYGLDSVHGANYINGATLFPQQLAAAATFNRKLVEQMGAVTAKDTRAVGIPWAFAPILGIAVQPAWPRVYETFGEDPFLASEMGVAIINGMQGNPTNISDPSKVAACAKHFVGYTNPRSGTDRSPGWIPDRMLMQYFVPSFRAAIQRANVRTSMESYNEINGVPVASSSQYLKKLLRDELGFDGE* # ORIGINAL: g7355.t1 original gene structure, not modified by PASA NODE_634_length_19910_cov_41.0688 AUGUSTUS gene 9946 10641 . + . ID=g7355;Name=g7355.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS mRNA 9946 10641 . + . ID=g7355.t1;Parent=g7355;Name=g7355.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS exon 9946 10641 . + . ID=g7355.t1.exon1;Parent=g7355.t1 NODE_634_length_19910_cov_41.0688 AUGUSTUS CDS 9946 10641 . + 0 ID=cds.g7355.t1;Parent=g7355.t1 #PROT g7355.t1 g7355 MTTSEGSLTDPTQTLQPDDDVASTDDRNGRRTVRAHDDPRHHDSESEEDEEATYPPAPPEGEELASCVWQYLNTLLSEADAFVADAVTVQYKYPGDIRQIHQCLPRGASLPMYSATSDRFSATLPMYLAGVLDDRTPADGAELLVCLLDPNVVQRTRTVIETYDASPLVNWFSLVVEACRPSGGLTIIKVEPDLLDVDCLGGFMVLNNLCGAADAECRNATRDWDGLSRLL* # PASA_UPDATE: g7356.t1, single gene model update, valid-1, status:[pasa:asmbl_8596,status:12], valid-1 NODE_634_length_19910_cov_41.0688 . gene 12138 16018 . - . ID=g7356;Name=g7356.t1 NODE_634_length_19910_cov_41.0688 . mRNA 12138 16018 . - . ID=g7356.t1;Parent=g7356;Name=g7356.t1 NODE_634_length_19910_cov_41.0688 . exon 13538 16018 . - . ID=g7356.t1.exon1;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . CDS 13538 16018 . - 0 ID=cds.g7356.t1;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . exon 13220 13376 . - . ID=g7356.t1.exon2;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . CDS 13220 13376 . - 0 ID=cds.g7356.t1;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . exon 12138 13009 . - . ID=g7356.t1.exon3;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . CDS 12189 13009 . - 2 ID=cds.g7356.t1;Parent=g7356.t1 NODE_634_length_19910_cov_41.0688 . three_prime_UTR 12138 12188 . - . ID=g7356.t1.utr3p1;Parent=g7356.t1 #PROT g7356.t1 g7356 MASFVARMDACMPETNNFAMTPGHVAAINGRTRKCAALLRQCISECDGLAEKIGLESSGLKESRKRLGDRADDEKELAMYFPVYGAVKAGKSTLLSCLTRTTILPSRPLPMTTIPIKILHKGGTEGISLVIPNAEQWNVCIADVVKNKTLSTGKDHPEHVIKLISEAKAGLKRFNIGNVLRDADAIADELMLLSDVARLCFLLDVDLAKYKIDLSLDHLPLITMDIAIFRNLGVDRPFYLVDTPGPNEARCSPALEKINRRVLEESSGALVVVPHNQIESRDIAGLMDDLGRCCAKAGKRLLVAVNQVDSMTDRAKELPAVLAQLKKNMGTLTNFDIIPVSSSRIMMMCELQAELDLERAGLAESKIWKQIVGTMGIGAGQLCDVEKYARDLVRQELETYNAIELVKAVKGIYLDSEALALKTRSEDLNFVCKALDEFVKQIETSMKGVEEQSRKLAELTAVINGVKHFRETVSNIRPALEKELRVIFDRLRENFVAWSKTEEWSIVDSRTSQRVEQTSFSNRFALIGWYGTEGEDKIMPRLTKAFGSFVDDVLKEVPDTVDTQWAILAKLSGKIGGVIGEEVDAMVFTHRMPPTLSFEKPKIVFDTKSMGIPEHTKEDNTITIIMKEFTDAVLSYFIKQSTAYADAALACFEESLAIVLSKFEEASMRFTMQADDMMKVQKELQQKAHLHAAELRDFVTRVTRSIKTARVEAKALSAELELVAVSVAEVPPEKSNVKPERLDKSTAQASTGRDVPSNHKDMGGRANGSGDANGSSAMVDVVFLDGNTVRVPYSPNQTILSLKTAIENQTKVNRVQLVLVYGDVTLKDLDGKNGGVMSTLGGLGVPPGATIRAVVAPYTVHVGQHLIVNAQNDRYGNALGSAYDLGLDGAFRGTVVVLHLYTGEGFTFAEPAAALKKKGFTVLRYANTPPSPEKLEIDLASASQLWVISDQLKKLNEAHKAVIKRAFDRGVGVYIWGDNIPFYADANAVSMYLLGCNVSMSGDTRGGRCVRVLPVHDINGSAVHYDGQTRLDGLLPNGRGRIGFIPNHPITTGIANLFEGHTIATVQMTPELVPIMWGSAGNLVTAAYDSDGKRLIIDGGFTRLYSNWDEAGSARFVSNAAAWLHNFENTGVKYALMQAEPIRGASMDRRKV* # ORIGINAL: g3139.t1 original gene structure, not modified by PASA NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS gene 549 1235 . - . ID=g3139;Name=g3139.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS mRNA 549 1235 . - . ID=g3139.t1;Parent=g3139;Name=g3139.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS exon 1066 1235 . - . ID=g3139.t1.exon1;Parent=g3139.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS CDS 1066 1235 . - 0 ID=cds.g3139.t1;Parent=g3139.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS exon 549 957 . - . ID=g3139.t1.exon2;Parent=g3139.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant AUGUSTUS CDS 549 957 . - 1 ID=cds.g3139.t1;Parent=g3139.t1 #PROT g3139.t1 g3139 MVVLSVIVCGVSGCGKTTIGSLLAHSLNGIFLDADDFHPASNVDKMRAGFPLTDEDRMGWLDALRKAIQSHARDSTTTVIACSALKRTYRARLCGLPDDASTSNHAASDYHARGIVFVYLKGTYEGIRRRMEARKDHFMPVALLKSQFDALEELDESEAIVADAETSPAVIVAQINEALCKISASPATVVVS* # PASA_UPDATE: g3140.t1, single gene model update, valid-1, status:[pasa:asmbl_6755,status:12], valid-1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . gene 1377 2336 . + . ID=g3140;Name=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . mRNA 1377 2336 . + . ID=g3140.t1;Parent=g3140;Name=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . five_prime_UTR 1377 1651 . + . ID=g3140.t1.utr5p1;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . exon 1377 1729 . + . ID=g3140.t1.exon1;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . CDS 1652 1729 . + 0 ID=cds.g3140.t1;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . exon 1989 2088 . + . ID=g3140.t1.exon2;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . CDS 1989 2088 . + 0 ID=cds.g3140.t1;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . exon 2243 2336 . + . ID=g3140.t1.exon3;Parent=g3140.t1 NODE_3949_length_2472_cov_39.1514_potentialcontaminant . CDS 2243 2336 . + 2 ID=cds.g3140.t1;Parent=g3140.t1;3_prime_partial=true #PROT g3140.t1 g3140 MEFGSLAALDALLNPREEVDVEDEFKTLTNAKGTSQAHPVVTPGAIGPKKTAPAEEKAQPAAKKSKSKDIWDSEEVTDAPDDSMDPRPQP # ORIGINAL: g3137.t1 original gene structure, not modified by PASA NODE_5549_length_807_cov_138.031_potentialcontaminant AUGUSTUS gene 88 741 . + . ID=g3137;Name=g3137.t1 NODE_5549_length_807_cov_138.031_potentialcontaminant AUGUSTUS mRNA 88 741 . + . ID=g3137.t1;Parent=g3137;Name=g3137.t1 NODE_5549_length_807_cov_138.031_potentialcontaminant AUGUSTUS exon 88 741 . + . ID=g3137.t1.exon1;Parent=g3137.t1 NODE_5549_length_807_cov_138.031_potentialcontaminant AUGUSTUS CDS 88 741 . + 0 ID=cds.g3137.t1;Parent=g3137.t1 #PROT g3137.t1 g3137 MVMVHVRSGERTNKTAARWSGPFPVAKIGERDQYEVRTGRRLVTFHVSNMKVFHDAATASGTATPPPDSATSGTLASPEGEQASPPATAGAPERTVRPAGTAAFTTWLWAHPWVASASHDDVTQTRAALSTQAGRDFTYNLGSPLRGWMAYCGSVGRDTTTSPSCTEMDDWLAREAGAVSTKAQRRYSLRRAFRFAHEPSFRQECIRRLLDGAPVRE* # PASA_UPDATE: g872.t1, single gene model update, valid-1, status:[pasa:asmbl_6084,status:12], valid-1 NODE_3453_length_3431_cov_81.5691 . gene 1820 3080 . - . ID=g872;Name=g872.t1 NODE_3453_length_3431_cov_81.5691 . mRNA 1820 3080 . - . ID=g872.t1;Parent=g872;Name=g872.t1 NODE_3453_length_3431_cov_81.5691 . five_prime_UTR 3030 3080 . - . ID=g872.t1.utr5p1;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . exon 3024 3080 . - . ID=g872.t1.exon1;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . CDS 3024 3029 . - 0 ID=cds.g872.t1;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . exon 2809 2898 . - . ID=g872.t1.exon2;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . CDS 2809 2898 . - 0 ID=cds.g872.t1;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . exon 1820 2628 . - . ID=g872.t1.exon3;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . CDS 2284 2628 . - 0 ID=cds.g872.t1;Parent=g872.t1 NODE_3453_length_3431_cov_81.5691 . three_prime_UTR 1820 2283 . - . ID=g872.t1.utr3p1;Parent=g872.t1 #PROT g872.t1 g872 MAAGKTGSKTGSKQKQGDKAKAVSRSSRAGLQFPVGRIHRILKDRTTSNGRVGATAAVYSAAILEYLTAELLELAGNASKELKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVVPHIHKSLLGKKAEKTKGGPAKAASGAASTQ* # PASA_UPDATE: g871.t1, single gene model update, valid-1, status:[pasa:asmbl_6083,status:12], valid-1 NODE_3453_length_3431_cov_81.5691 . gene 75 1656 . - . ID=g871;Name=g871.t1 NODE_3453_length_3431_cov_81.5691 . mRNA 75 1656 . - . ID=g871.t1;Parent=g871;Name=g871.t1 NODE_3453_length_3431_cov_81.5691 . five_prime_UTR 1539 1656 . - . ID=g871.t1.utr5p1;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . exon 1293 1656 . - . ID=g871.t1.exon1;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . CDS 1293 1538 . - 0 ID=cds.g871.t1;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . exon 907 1062 . - . ID=g871.t1.exon2;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . CDS 907 1062 . - 0 ID=cds.g871.t1;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . exon 360 551 . - . ID=g871.t1.exon3;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . CDS 360 551 . - 0 ID=cds.g871.t1;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . exon 75 176 . - . ID=g871.t1.exon4;Parent=g871.t1 NODE_3453_length_3431_cov_81.5691 . CDS 75 176 . - 0 ID=cds.g871.t1;Parent=g871.t1;3_prime_partial=true #PROT g871.t1 g871 MALAHGASAVRAARATVGGRRVLATALLVLLLADSTHALLEGLYCGVKNCYDVIGVQPNAEKAEIKRAYRKLSLKLHPDRNKSPDANAQFRELATAYEILKDDDARADYDQMLQHPEQYYRHYFKYYQRRVTPKVDPKIVIAVLLVFVSIFQYANQYVMHRRFINYILRTPKMRAEALQEAEAMGHVPDLKAVAKRERADEESKFIESMIPHVFGIDGSYAQPSIRNVLAVR # PASA_UPDATE: g9524.t1, single gene model update, valid-1, status:[pasa:asmbl_7516,status:12], valid-1 NODE_4670_length_1348_cov_29.491 . gene 152 1202 . - . ID=g9524;Name=g9524.t1 NODE_4670_length_1348_cov_29.491 . mRNA 152 1202 . - . ID=g9524.t1;Parent=g9524;Name=g9524.t1 NODE_4670_length_1348_cov_29.491 . five_prime_UTR 1202 1202 . - . ID=g9524.t1.utr5p1;Parent=g9524.t1 NODE_4670_length_1348_cov_29.491 . exon 1075 1202 . - . ID=g9524.t1.exon1;Parent=g9524.t1 NODE_4670_length_1348_cov_29.491 . CDS 1075 1201 . - 0 ID=cds.g9524.t1;Parent=g9524.t1;5_prime_partial=true NODE_4670_length_1348_cov_29.491 . exon 533 683 . - . ID=g9524.t1.exon2;Parent=g9524.t1 NODE_4670_length_1348_cov_29.491 . CDS 533 683 . - 2 ID=cds.g9524.t1;Parent=g9524.t1 NODE_4670_length_1348_cov_29.491 . exon 152 275 . - . ID=g9524.t1.exon3;Parent=g9524.t1 NODE_4670_length_1348_cov_29.491 . CDS 152 275 . - 1 ID=cds.g9524.t1;Parent=g9524.t1;3_prime_partial=true #PROT g9524.t1 g9524 AQEKASGKSKAQKAIGNQVIRKGWLTSPSSIIGSKEYWFTLTAECLTWFKDDTEREQKYVLKLDSLKIREVKSGGFSLGAKKFGFELFNPDQRYIFKDNKSLDLYTTTAEELENWQASFLRAGVFPERETVVSD # ORIGINAL: g6815.t1 original gene structure, not modified by PASA NODE_2410_length_6384_cov_33.6939 AUGUSTUS gene 5476 6230 . - . ID=g6815;Name=g6815.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS mRNA 5476 6230 . - . ID=g6815.t1;Parent=g6815;Name=g6815.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS exon 5916 6230 . - . ID=g6815.t1.exon1;Parent=g6815.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS CDS 5916 6230 . - 0 ID=cds.g6815.t1;Parent=g6815.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS exon 5476 5823 . - . ID=g6815.t1.exon2;Parent=g6815.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS CDS 5476 5823 . - 0 ID=cds.g6815.t1;Parent=g6815.t1 #PROT g6815.t1 g6815 MPCGLDTIGVFPMGIRVTGDLSALGGIHSLILCNCNVTDVSALGSVHSLDLSRCNGVTDVSALGGVHSLDLSRCKGVTDVSALGGVHSLDLSSCIGVTDVSALGGIGGCVCIGGVHSLDLSGCMGVMDVSALGGVHSLDLSGCIGVTDVSALGGVHSLDLSSSPGVTDVSALGGVHSLDLSDCPGVTDVFALGGVHTLDLSSCMGCRCWAASIHSISAAA* # PASA_UPDATE: g6813.t1, single gene model update, valid-1, status:[pasa:asmbl_4250,status:12], valid-1 NODE_2410_length_6384_cov_33.6939 . gene 189 4825 . + . ID=g6813;Name=g6813.t1 NODE_2410_length_6384_cov_33.6939 . mRNA 189 4825 . + . ID=g6813.t1;Parent=g6813;Name=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 189 309 . + . ID=g6813.t1.exon1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 189 309 . + 0 ID=cds.g6813.t1;Parent=g6813.t1;5_prime_partial=true NODE_2410_length_6384_cov_33.6939 . exon 657 720 . + . ID=g6813.t1.exon2;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 657 720 . + 2 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 1003 1111 . + . ID=g6813.t1.exon3;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 1003 1111 . + 1 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 1390 1564 . + . ID=g6813.t1.exon4;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 1390 1564 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 1676 1761 . + . ID=g6813.t1.exon5;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 1676 1761 . + 2 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 2069 2218 . + . ID=g6813.t1.exon6;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 2069 2218 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 2422 2538 . + . ID=g6813.t1.exon7;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 2422 2538 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 2732 2809 . + . ID=g6813.t1.exon8;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 2732 2809 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 2962 3066 . + . ID=g6813.t1.exon9;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 2962 3066 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 3331 3435 . + . ID=g6813.t1.exon10;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 3331 3435 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 3724 3900 . + . ID=g6813.t1.exon11;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 3724 3900 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 4053 4163 . + . ID=g6813.t1.exon12;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 4053 4163 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . exon 4381 4825 . + . ID=g6813.t1.exon13;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . CDS 4381 4605 . + 0 ID=cds.g6813.t1;Parent=g6813.t1 NODE_2410_length_6384_cov_33.6939 . three_prime_UTR 4606 4825 . + . ID=g6813.t1.utr3p1;Parent=g6813.t1 #PROT g6813.t1 g6813 AKAENDRDAKIAAEKKSTPHFWNLNEDPQLTAVVVHFARPGVTLLGNKSANPVPEIVLAGLSIMKEHAIITNTDNKVKIKVGTPNARILVNGEQITGEIALNDKDRLVFGSSHTFVFENPKAPNDKLKIEQVDWSFVQKEIARHSGFQLTEQDKAKEDMLLQEDLITLLPMVNEANAISEELNKKVFFELTLVSPAARGLKEGRTEVMVKLRSLLNDNHWMWSRAKFLNRKFIMQEMYQNYVEGDEWDQPQEKDPFWEPSDMEQLIGSVHVYPQSLCYGIETDETVAITDYKGTDQGQLKVEIVPCKADGSVIGEDDENFVEEPEELIGKPLAFKLRIPYARGLPQKFSKGLCCKYKFYLDETVHSTKEVVGTANPDFAYEKLFVFNAVTEQFLNYLKDQSVLIEVHGRQDDGKPGAPVAAAAGKKPADTRTVVKGTVSVDARYEEERYRLSCEAATMRRRLERLEGKMKRIKAVAAEAAKKKEKTVDLIKLNRAINWTGFRLKAIARIVIQEKKLEKLAKQQRGQTFTHQNISATCSVQ* # ORIGINAL: g6814.t1 original gene structure, not modified by PASA NODE_2410_length_6384_cov_33.6939 AUGUSTUS gene 4908 5303 . - . ID=g6814;Name=g6814.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS mRNA 4908 5303 . - . ID=g6814.t1;Parent=g6814;Name=g6814.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS exon 4908 5303 . - . ID=g6814.t1.exon1;Parent=g6814.t1 NODE_2410_length_6384_cov_33.6939 AUGUSTUS CDS 4908 5303 . - 0 ID=cds.g6814.t1;Parent=g6814.t1 #PROT g6814.t1 g6814 MTDVSALGGVHPLDLSSCIGVTDVSALGGVHSLNLSSCKGVTDVSALGGVHSLNLSSPTGVTDVSAFGGVHSLNLSSCIGVTDVSALGGVHSLNLSFCTGVTNVSALGGVHFLARYGCSTTKEVVHVSASH* # PASA_UPDATE: g1123.t1, single gene model update, valid-1, status:[pasa:asmbl_4266,status:12], valid-1 NODE_2419_length_6347_cov_56.7812 . gene 3519 6240 . - . ID=g1123;Name=g1123.t1 NODE_2419_length_6347_cov_56.7812 . mRNA 3519 6240 . - . ID=g1123.t1;Parent=g1123;Name=g1123.t1 NODE_2419_length_6347_cov_56.7812 . five_prime_UTR 6217 6240 . - . ID=g1123.t1.utr5p1;Parent=g1123.t1 NODE_2419_length_6347_cov_56.7812 . exon 4462 6240 . - . ID=g1123.t1.exon1;Parent=g1123.t1 NODE_2419_length_6347_cov_56.7812 . CDS 4462 6216 . - 0 ID=cds.g1123.t1;Parent=g1123.t1 NODE_2419_length_6347_cov_56.7812 . exon 3519 4162 . - . ID=g1123.t1.exon2;Parent=g1123.t1 NODE_2419_length_6347_cov_56.7812 . CDS 3650 4162 . - 0 ID=cds.g1123.t1;Parent=g1123.t1 NODE_2419_length_6347_cov_56.7812 . three_prime_UTR 3519 3649 . - . ID=g1123.t1.utr3p1;Parent=g1123.t1 #PROT g1123.t1 g1123 MQEQFHPFTEFDVIVFGDVVRACYGRLVKYSPAVHATTLDWLRGLRPSGRRNLLQAFRVALSIEGADSVYFLLGGKTELTSETLLEEIRHFKKGRPTRIHCISYNCLNPKANDTLQRIAKEYDGRFHSFSSSDVTKTTVGRDEIDQTDEAEDEARRSKRRPTIEVTGTDIRLLEKELERADNNLKVTRELLSTTRHRGHEGEMLAYGERSRSAQGGVVAKRTRKAKSASKKATVEDHSDDEDDDAREKDDHADEAPMEDHTESTSPQGDSMRRRSVTFRKSSGSESESGAESSLSDGSDRSDGSEAEVEEVEDARASKAEDTGPDARTRRPLHFVPGQRVIARNASTGFYYPGTVGTRSSKRKNNANSEDEFAVDFDDGNKQRVSYLDALQAEESAASSARRLLTGDRVLARKAESDEFRPGVVTNAEAPAPTGQRGRFAEILFFDDAKCTVAHGHIFPLSTQTHARVCAYILSRMDSEVERMRQKMERLRAELEPRKDAAEALERHVMATSPRPAPQHHHSAKHSESDEESRNSSHDSSREGTREREPVPPVSKRVKKLKRQNKERPSSSEDEGGHDAQRAPVVEFSSNTVLACRHGDGRFYRAEVVGADRDGRVHVQFASSPKDSTQATVMDEIIPIGGKNARPLVRLRAGDKVLAPHIPGNSMSASSDSLADSAGSLDSQRSGDESPLHGNALQRASDPLQAFCPATVVRSHKGHVNVLFSNGAKHRGLGELDCWPISTERFQKIAESGLWA* # ORIGINAL: g9247.t1 original gene structure, not modified by PASA NODE_282_length_28199_cov_42.5182 AUGUSTUS gene 8929 14446 . + . ID=g9247;Name=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS mRNA 8929 14446 . + . ID=g9247.t1;Parent=g9247;Name=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 8929 9752 . + . ID=g9247.t1.exon1;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 8929 9752 . + 0 ID=cds.g9247.t1;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 9844 10423 . + . ID=g9247.t1.exon2;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 9844 10423 . + 1 ID=cds.g9247.t1;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 10870 11190 . + . ID=g9247.t1.exon3;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 10870 11190 . + 0 ID=cds.g9247.t1;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 11379 11965 . + . ID=g9247.t1.exon4;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 11379 11965 . + 0 ID=cds.g9247.t1;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 12091 14446 . + . ID=g9247.t1.exon5;Parent=g9247.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 12091 14446 . + 1 ID=cds.g9247.t1;Parent=g9247.t1 #PROT g9247.t1 g9247 MTSSGGVYGSALSQGWSDGSVALFAGADRKSRVERFLQSTKRGLFGVPFVMVKNAALARAWVSIELLIDFFQLLGFPFNAYHKDFPWNESQSLWFQQFLRPFAFESYIENLRAVFYVAVAIVIFLLANAFFVGYSFSKNKFGMLPVTCLRAIAGLSSTVLFIPLTGILAARLKDGPWSGVDLFEKVLAIIVGLAFILLSLLCGICFSEPNPASRTVLNRAHSRVDLYASAMQAILSVTFTLMTDEGKEAWALAGTLIGASATTALLFTWYPPYYRYSFSLARASAYWLVTWAGLCLLVVLSKDDQENQAFIFFLFGAPFVCMAAVTTTNWRRRRIAAADIDTLRNALDVELKVRLHLIKSGIFFNYRPPGTQPAYDKLDEVDDDVARNAIAQCNAWYRTAVRRNPRSSLMHTFLSNHYQYFMGNGQLALSELQAAEELSPHFDEDFFIYRRRQMVQDEMAGGKGDVIQTLRMYAAFNMDVVNDPMTAETLLGRASELDDLEGSDGDDRAGRLSALEMGTMTVAEMLMDDKYATVTVSGDLHREGIIAAMNVSACRLLGYRSRELVGRNVASIIPEPFASHHSGYVKRYLEEGTSSWLERPVRVYALHKSRYAIHVVMCITQVCSPTGGILFLAAMKPIAAPQRLEGVRGESACTLIVAPDGHVVTCTAACGAMLNIGPDQFGPNAPQLPATRFLPDYAAISAGLATDGVKEKEAASGERNHRPLHQLRIISVVNSRGSSITASASVSTLTSSSGDTAVLITLQAMPHVAHRPRVDAERRQFRVGTENSLRSPRGSDETVLGNAPSDMRRLSRVHFDSVVAEDGGTVHQHAVTLQEEGWESIELTLVRDHTNRDIDMTVGPAVSVSAVDAQVQEEGAASNDHVSGDENSDDGHEHYGGRSRSRAGSVAASQTSSSSSSHIGHVRAKILMGKGAGIGRLGVVLQAVFLFVVSGLIVIASIGMVMTADQARKYAGTVDDAISASVESLLTYDIADSAFSLALQSGGLYNNKNETTLRARMAATSKELDTIHAALCANVQDLPEDHRALYMKRSLDATIVDEVTENLVNRTYNLWDLVDLYASDALLLSRLPLPGIDSTGSYRFITGVVADPLWPALASSVDYYVATARNTSDDASKVAFQFFTIGLSFILASTILVVLPVLALIERRQMNVICPFLHVLKAIVVEMAKKCDSRIVARNALNDGFNGNDDEQMLDHDTDYDDQKNTTQFRGENGADGNNLSKGRGFGGSVDHVTAWRVRRGMDGLDRLKKPTLSVRVRLTARNQAWAILKVAVLCAAGVVFFSTMSVVVNSFVAANETTAISVNYSNQRTYQTLLNVFSVRMIAGSSGPVRRSTFQAYLSSFSKSALQTHEDLLYGNPELGIPASATESRYRYLLFENGCVDDSQPDCSTAYGGLLATGLSAALQRFLRSATSIGAVASALPMTLDVNKTRNFYEGQVFHQFELFGEEYLRPSLNAMTKSFGSNLTKDVDTLDSGILVATVVFCCFIGLFYVTLLVPIAGRASHDTRWMQILLLCVPADILRATPSLADFIREHYTQRV* # ORIGINAL: g9246.t1 original gene structure, not modified by PASA NODE_282_length_28199_cov_42.5182 AUGUSTUS gene 1602 7335 . + . ID=g9246;Name=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS mRNA 1602 7335 . + . ID=g9246.t1;Parent=g9246;Name=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 1602 2120 . + . ID=g9246.t1.exon1;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 1602 2120 . + 0 ID=cds.g9246.t1;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 2280 2608 . + . ID=g9246.t1.exon2;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 2280 2608 . + 0 ID=cds.g9246.t1;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 2736 3333 . + . ID=g9246.t1.exon3;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 2736 3333 . + 1 ID=cds.g9246.t1;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 3475 4002 . + . ID=g9246.t1.exon4;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 3475 4002 . + 0 ID=cds.g9246.t1;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS exon 4132 7335 . + . ID=g9246.t1.exon5;Parent=g9246.t1 NODE_282_length_28199_cov_42.5182 AUGUSTUS CDS 4132 7335 . + 0 ID=cds.g9246.t1;Parent=g9246.t1 #PROT g9246.t1 g9246 MSYSQSAASHAYSAAPPASHGDSSVSATGAHRGSTVHRVATALKDGLFGILFVMIKDATIARFWVIVELCIDMMQLLAFPFNAYHQDFPWNSGQSMWLQRIVKPFVFETYIDTSTAVFFTAIGILVLFLANAVFVGYSFSSDKYRMMWTIKLLRTISGLVSTIFFIPLTGILAARLRCDPGVTCWAGFDLFEKILALVVGVAFIFLSLMTGICFSEPSPSARSVLGRPHSRVDLFASAMRASLTVMFTLLDSSTISHWVLCIALLVCGVSTATMFTWYLPYYRHNFSLAKVVTFWILTWSAVCLIIARANGTENNQAFVFFLVAIPFIVYSAISAANWRRRYIEQTPCNRLRSSTDIELKARFHLIASGIFFTYKPNASDSDMELLIQAGEMQPIDEVAARKAIAEVNTWYRFAARRNPRSSLLRLFWSNHQQYFMGNNQLALAELQAAEEMSPHLDEQFFIYRRRKMVQDEVAGGKGDVIQFIKFQKHMQEAQQYDSRATKAQLALWTELLKRDPDPMAMNRMAWRATTCISRAQTGYQELIRLNPNVPQTFRMYAGFLIDVVHDPLTAEMFLARAGELDDAGAAHDKTDKGGARALNAESMGIAEMLTDDRFATIAISGDLRREGTVVEMNTSACRLLGYRQRELIGRNVSAIIPEPFGSNHNRYLRRYLEEGASTVMDRVASVFAIHKSGYTVPISMLVRQMCSPTGGILFLAAMRPVEPSSADSTEDSSIIVSRDGTVVTCTASCGALFGIQPDDFAPGGTKLHVARFVPEYAMYEASGHNNNSSDADANTTGTMNVQERGRFDSVAVTLPHGPATARMTISAITSSLGDTMIILRFEVEQMSHDGGHERFSSADQQPDTRPPPLFAMSLADNEAPCPLPSRRVNSVEYHAAAAFPSRRANSVEYHAAPIANRRMDSVEYQASISVPRRRANSVECQAAAFANRRMDAVEYEASLPHSLAMSLDEVSEEPKKARRYGKMQSKVQFDTEGSETDAVDISAAGSAMDHSDVDVHIDVEHCKHSSGEEEAAGAQKEQGERAPPKPNKARSVTSESQASSTASRIDGVRERILFGAGASTGRLGVVLRISLLLSVVGVIAIAASSYVELDKRTSEYTSSVQHVILAAKRRVYVYDILDATELLVLNTLGAYDLYNASTIQARLSTAAFHLDDVHGQLYAGFKGMSADQKLLYTSLTIPIDKFEGGEKVVQMTNLWSLIDLVVAEARAISIMHPGAVVADNPSIYFIYHNALTIIETWIERSMALYQASAVTANQDASQTANMEVAIAMAFAVFSTIVVLFPLLVLIERRQTSVIWLFLTVPRQVTSGMADHCRSRLESREALDDGFVDDSSNDADVDDGNKPGNADGDTSKRSSMRDNLAQSQSNDADQDYDHAPTGTSGAGVFAGLPAMFSRAHRQQRNGKPHTGHLSHARRVKRAAIPTVTQRAKLFVSNQMRNIICVAVLLVISLAFFGTMHAIVTSFIKDNELTAASVNNNSKRNYYALVSFLLIRTLAGANTTEEVISTNDMFNNATQHALQLHNELLYGDATLGIPAIATEPRFQPLLFKNGCIETSPADCDTFYGGLLDNGLSVAFLQFIRDCRLLRQPAYDMPVPCPLPVLKDFIIEHNMGPMNTFLDQYLRPSLVRMTEMFGTTLDQDVVNLQNQRLVGTIVYCCLVGALYILFLMPIAGRANDDAKKLQVLLLCVPPNVLRSTPAFANVIRENYA* # PASA_UPDATE: g9248.t1, single gene model update, valid-1, status:[pasa:asmbl_5088,status:12], valid-1 NODE_282_length_28199_cov_42.5182 . gene 15027 27772 . - . ID=g9248;Name=g9248.t1 NODE_282_length_28199_cov_42.5182 . mRNA 15027 27772 . - . ID=g9248.t1;Parent=g9248;Name=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 27401 27772 . - . ID=g9248.t1.exon1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 27401 27772 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 26837 26974 . - . ID=g9248.t1.exon2;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 26837 26974 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 26085 26612 . - . ID=g9248.t1.exon3;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 26085 26612 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 25553 25714 . - . ID=g9248.t1.exon4;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 25553 25714 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 25045 25310 . - . ID=g9248.t1.exon5;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 25045 25310 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 24770 24908 . - . ID=g9248.t1.exon6;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 24770 24908 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 24157 24288 . - . ID=g9248.t1.exon7;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 24157 24288 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 23599 23802 . - . ID=g9248.t1.exon8;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 23599 23802 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 23027 23188 . - . ID=g9248.t1.exon9;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 23027 23188 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 22801 22938 . - . ID=g9248.t1.exon10;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 22801 22938 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 22164 22417 . - . ID=g9248.t1.exon11;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 22164 22417 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 21413 21536 . - . ID=g9248.t1.exon12;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 21413 21536 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 20826 21057 . - . ID=g9248.t1.exon13;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 20826 21057 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 20177 20400 . - . ID=g9248.t1.exon14;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 20177 20400 . - 2 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 19706 19969 . - . ID=g9248.t1.exon15;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 19706 19969 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 19068 19238 . - . ID=g9248.t1.exon16;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 19068 19238 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 18751 18920 . - . ID=g9248.t1.exon17;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 18751 18920 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 18354 18456 . - . ID=g9248.t1.exon18;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 18354 18456 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 17976 18140 . - . ID=g9248.t1.exon19;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 17976 18140 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 17535 17632 . - . ID=g9248.t1.exon20;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 17535 17632 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 17201 17287 . - . ID=g9248.t1.exon21;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 17201 17287 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 16797 16924 . - . ID=g9248.t1.exon22;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 16797 16924 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 16439 16560 . - . ID=g9248.t1.exon23;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 16439 16560 . - 2 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 16013 16248 . - . ID=g9248.t1.exon24;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 16013 16248 . - 0 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . exon 15027 15579 . - . ID=g9248.t1.exon25;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . CDS 15441 15579 . - 1 ID=cds.g9248.t1;Parent=g9248.t1 NODE_282_length_28199_cov_42.5182 . three_prime_UTR 15027 15440 . - . ID=g9248.t1.utr3p1;Parent=g9248.t1 #PROT g9248.t1 g9248 MVDLCGMCGGNNACVGCDGIVDSGLVFDDCGVCDGGNYDKDCAGVCFGDASQDGCNGCSMGTTGILDPVLADCKGECGGPYLFDDCGNCGALPYQMEQLPQGGGVWWDEAMDCALNCEGTYQKDKCGYCVPSDAQKLTQDCRGDCFGNAKTDACGTCYGGRTGLLINSKQDKCGVCNGNGSTCVGCDGVVKSGKILDACGLCGQQSTSCVQVVNVSPAAIDPTLPNSIPSERTFFVGGGFGAELGSRVYTPTCRLVRIDGVTLPFTKDQIYFGGVYDKAAPLAKIQCNIPQDHTLSMGRYYASISVRSNGTYTDTAAEILLYNKRAVVVDSLVPTAADFSRAGLLKVSGSGFVQGGTPVCVFVANSTDATRTTFPATYVDANTMVCQYPAMAKSQKYSILISFDGSATTPFQTPAATPFFTLYAPAPDPKSIAFVVKDVTTLTVTFPAAVTYTASDCATLFVAEALTMLGSGAKCSFTAPDTLSVELSRSATLKPLDSLQLSAAANIRAAGQAISYTTTATLIVPLYVALEERPTVSLYADVQRLSTCDDALLLVNIGNCGNRDVKISVFVSASDGSSTDAIAALVNNGELAANGHISIPNSLFKTGITYAFSPDLVDFIGRSSREPESRGEDSVFIRKTGETHAAKAYIVGPLTMEISDAVTFTAIVEPSVCGDAAVLHYLWTTADGRDLGPGIHSPVLNLPEWFFPHSGQLGNGDEPGGRGYTLVLMLTVTSSNPKTTPTIVTQNVEVKMPYGKSVSFPSLHFDADGVTWVTQETPLVLYPECVDRRYPPGHALRSVDCDTLLWKCVFGNGVACYSPNYGTLFVPFKLSGFGMDKSRPDKRNYTFSYTDLISQYNALGMSFTVTAGRTSQQKWNGGPGELSEPRGTTTIKVKLLMTIGNQYPLPSIYVADVKPSYNENERVYLSAVIGNVTWSTPAPAYFAWINIVEPGFASINLPGSLCPFDNGTAATVANEQTLCIREGVLMAGQSYKFQVRFGSVWDNYKDNYAKSGAVVNVNRAPSGGKAVMAPTVNATSMAWVFASGFVDVDGPVKYQFGIQTESGDVEYRTESTIKSYARMKFPARSGVTEYDTTVVVTATDAHGASTTVTSPVTVVLPKALSADATGDDVAKYVNDNILSGSASNELASGNVEGFLDSIGSALDYMNDRLKNGTCVASLSTVVTRTVALLDKLWPSIVLTDSLIATLTNVLGNVVAAARCLSDELLNAVRKYLSLVVAAAVAPGSSAMNDDIALRVLETAKQTVSADGALSAQAGSAIGDMVKKMGSALAKSVTADGAPRVLATADGKLKMVVDVQRYSSSDNKPMTFTGGCASCDLNVPAAALAGIITDAGCADEGGCSVNVGSVVATYKSNPYGGSGTLTNVLDVSLINQETGSEYPVQATSAPIRITIPCPGGCAQSSMACSFYNPATKKWDTTGVKLVSRTSTAITCETNHFTSFAGRDPAASVSVPEEKVPDAPVTPSGPSGPSDPSGPTSGGSSGSKSSTNVGAIVAPIVVCVALAAAAVGFVLYKKRGAGKSYGKTAPKHRPSRHDNELYVAQTSNPLRESASTDALELHENKAYTVDV* # PASA_UPDATE: g3006.t1, single gene model update, valid-1, status:[pasa:asmbl_7476,status:12], valid-1 NODE_4616_length_1403_cov_89.5783_potentialcontaminant . gene 47 1403 . + . ID=g3006;Name=g3006.t1 NODE_4616_length_1403_cov_89.5783_potentialcontaminant . mRNA 47 1403 . + . ID=g3006.t1;Parent=g3006;Name=g3006.t1 NODE_4616_length_1403_cov_89.5783_potentialcontaminant . exon 47 1403 . + . ID=g3006.t1.exon1;Parent=g3006.t1 NODE_4616_length_1403_cov_89.5783_potentialcontaminant . CDS 47 1403 . + 0 ID=cds.g3006.t1;Parent=g3006.t1;3_prime_partial=true #PROT g3006.t1 g3006 MASVVSFSSLPLEIVVHHIAPFLGNVELSSLSKVNSSLHTHLRHVRLFHLWPMYIRKYIEDSQFRDEVRVTIPVDGLVLVSFDGDLQDRSAFKGVHSALFPKEGRTGSTCSASDLSPLKGVHTVELSFTSKLPDFLAPLADAQVVCLRGVYSRPRVPAFRKAKSVDIRNGWLDLNDLAGIPRVTLGGGYTEPGTRFQDVSPLRLARFVELRSQKELEDLSCLENAREVVIHDCPRIVTLPPATYLRAFTWHDSPLTAIPPELGGLRFLDLSGAAELEDVSAAGNVHELILRKCFSLNDVSALGSVHTLRISSTGVLGVSALWRVHTLEFECARLEGVSKLTDVHYLSLFSVEFNVRELSQLGTVHTLSLPLVDIEDVSTLGGVHTLLLKRNERIVDVSALGNCHRVELIGCPVSDVSMLGRVHTLNLQSTNVSDVSMLGNVHTLNLRGCKKV # ORIGINAL: g377.t1 original gene structure, not modified by PASA NODE_1462_length_11139_cov_37.9487 AUGUSTUS gene 1786 3018 . + . ID=g377;Name=g377.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS mRNA 1786 3018 . + . ID=g377.t1;Parent=g377;Name=g377.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 1786 3018 . + . ID=g377.t1.exon1;Parent=g377.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 1786 3018 . + 0 ID=cds.g377.t1;Parent=g377.t1 #PROT g377.t1 g377 MHSGFVCMRQPPSTGNSSDDTNNDNDNSGRTKCHVVFALHFPDGRPRQFRLEEVAIVSTARVCELYFDGAYVASSRGKPIEVDHLPPSDASAAPLPGTDSALPNNAAPCDGVGSGAHVQFYATHLRPERLQVKSSVSAAVYTSGSSERGCLALRFASLGSNPTLWCLSRISFCGSVIATSDSGFASSALSGVAGVGSVDMAVVRSMLGMETAASGISGVAADKKTTASLHPGAMALMSAIEQQQRVGKQAAGSAMQQLLASGMSLMGMAGVGGMMQSTPPQQQQQQQQQQQQQHLPPLRAHGNLTPAEPSSSPCSTGSVSDCVSRPEVSADFSLSTGAASDVRQLIRDEIAAAEKRILCAVDASVDASCQRIMAHFDSRMDAIAAQMSAGLALAQGLGFGLGAPLRGQSK* # PASA_UPDATE: g379.t1, single gene model update, valid-1, status:[pasa:asmbl_1673,status:12], valid-1 NODE_1462_length_11139_cov_37.9487 . gene 10398 10871 . - . ID=g379;Name=g379.t1 NODE_1462_length_11139_cov_37.9487 . mRNA 10398 10871 . - . ID=g379.t1;Parent=g379;Name=g379.t1 NODE_1462_length_11139_cov_37.9487 . exon 10398 10871 . - . ID=g379.t1.exon1;Parent=g379.t1 NODE_1462_length_11139_cov_37.9487 . CDS 10557 10871 . - 0 ID=cds.g379.t1;Parent=g379.t1 NODE_1462_length_11139_cov_37.9487 . three_prime_UTR 10398 10556 . - . ID=g379.t1.utr3p1;Parent=g379.t1 #PROT g379.t1 g379 MDFFSRALSVECEGTGVWVQSVLPFYVSTKLSKIRNQSVLVPSADRYVRAALATLGHDSRTFGYWAHRVEAFIIDSVPQWLALSVATKQLKTARSKALNKLKRS* # ORIGINAL: g378.t1 original gene structure, not modified by PASA NODE_1462_length_11139_cov_37.9487 AUGUSTUS gene 3913 9964 . + . ID=g378;Name=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS mRNA 3913 9964 . + . ID=g378.t1;Parent=g378;Name=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 3913 3947 . + . ID=g378.t1.exon1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 3913 3947 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 4359 4933 . + . ID=g378.t1.exon2;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 4359 4933 . + 1 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 5476 5592 . + . ID=g378.t1.exon3;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 5476 5592 . + 2 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 5777 5865 . + . ID=g378.t1.exon4;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 5777 5865 . + 2 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 6235 6444 . + . ID=g378.t1.exon5;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 6235 6444 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 6697 6845 . + . ID=g378.t1.exon6;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 6697 6845 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 7040 7331 . + . ID=g378.t1.exon7;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 7040 7331 . + 1 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 7566 8072 . + . ID=g378.t1.exon8;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 7566 8072 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 8285 8362 . + . ID=g378.t1.exon9;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 8285 8362 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 8587 8741 . + . ID=g378.t1.exon10;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 8587 8741 . + 0 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 9018 9228 . + . ID=g378.t1.exon11;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 9018 9228 . + 1 ID=cds.g378.t1;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 9449 9964 . + . ID=g378.t1.exon12;Parent=g378.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 9449 9964 . + 0 ID=cds.g378.t1;Parent=g378.t1 #PROT g378.t1 g378 MRACHRSYTAVEHPEHFDAGAVAYTAADAKLKRLRSVEGEEGVRASQRLKPSRASGGTLSPTADADVDADVAWEAIYAECSVADISAASARPVCAHASTAVGCEHCAAVMPSAMSSSNGDADTMESDADALSALAAEPLEGVMFEDTTTRRLSEKLEGHALFQNSAHSFIEKLVGTMQPRMYKPGDCIVTYGEVGRAMFFIYKADARDIICRAQDKLEETLKNFPDIELQIQREAEERFEMYRKHKKLTEDQQNVNFAKSYEAGLLRSNLERVPLFRNCEIGFLHMLAMQLTPRTFRPHEYIVRKGDSGDFMCFILGGHVEVVDDDTGTIFATLTEGHFFGEIAVMLSVPRIASVRAVDVVEVFVLGKESLEKVLPQYPEMQERVERVSRRRYNEYVRMQEQGHVVAAIGSDVDGGEHSSSFFSQQQRVPNGTASFRGGLSPSSSLASASADSLSQSFRAAIAATATHAANQASTPLRRMDAEVEATGMDASPSATDVVIVDHSAPATPLHTSSPFASTGSRDARRAGVNMAALRQSSEANGDDDNGDADSKPPIVSGDGMDGGDDASRPVSHPMVQKLVKQSTRKRRASVAVWNAVIVEELQNDSDSQKSISKVSLADLRQREKERQLADDGPLVRRETLARILGFLDVRERAVAAQVCRSWHSMINDPALLEHVCLSAAHKSVTDRVLLVLLERWGAHIVSLDLSNCWHVTDGGIKAIASHCPKLRNVSLFSCWEATTDGLTALVTALPEIESLNLSNCRKITDESMAAIGAHCGGLRELELSYCKNLSDAGLESIVAKCPKLRLLNLQRCTRLTKEGFGVFRRNPNPHMRTLVLSDLISMDDKAVLDICVGCPNIADLRISFCFGISEVALSHIATHCSQLIHLDVSCCGNAVTDSSVAVIASSPVLSRLASLNLRNCPLVTDQAVMSLDAGCPALTRLNVSNCKAVAPTIGDRATRIAHVVMSATMLKRFASV* # ORIGINAL: g376.t1 original gene structure, not modified by PASA NODE_1462_length_11139_cov_37.9487 AUGUSTUS gene 332 709 . + . ID=g376;Name=g376.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS mRNA 332 709 . + . ID=g376.t1;Parent=g376;Name=g376.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS exon 332 709 . + . ID=g376.t1.exon1;Parent=g376.t1 NODE_1462_length_11139_cov_37.9487 AUGUSTUS CDS 332 709 . + 0 ID=cds.g376.t1;Parent=g376.t1 #PROT g376.t1 g376 ASQISLAQNAQTFENAKNAARAEAASALRDKERAAAAASKKDKARGKGGHDSDEEREFKNKVERAMEEQRLADLEAERLSRLDERKRPYNSLRRDGDTKVTDEDMEAFKMKRIRTDDPMAQFLSK* # ORIGINAL: g6495.t1 original gene structure, not modified by PASA NODE_244_length_29507_cov_40.7827 AUGUSTUS gene 7880 10045 . - . ID=g6495;Name=g6495.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS mRNA 7880 10045 . - . ID=g6495.t1;Parent=g6495;Name=g6495.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 7880 10045 . - . ID=g6495.t1.exon1;Parent=g6495.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 7880 10045 . - 0 ID=cds.g6495.t1;Parent=g6495.t1 #PROT g6495.t1 g6495 MNEGDFRELFNAKPDDSDSDGDDPTQLAEKLRGGGLLSSGQAQDASASNASIAYDAEYDLMLDALQRQLEFVEKRLGEFLGAGNDLSSAGAAGLLRDAQEADAALRRALRGARGKDSQPQTAMPSLLGKYLPRQAAERGAKKSKYVNHDFIDRIKKRENEKLARARDSSDEDDYGNNDEDYPRHHRRDGEQVRLQQAESVLGTYETCKTLLKSMRKDELQEKLSRQRKEEQRRRERKEKKERALEADATAKRYARKLPRSTLSKEEDGFIAALPKTKYYELAQLEMAMIRGGHDAKQLWEEQVPSGGARGQLVIYQKGHPGGHAVATAGTAAAAANNASMSHLRNHKGDEFSGRRPLPDIVVNAGVTASSRAQSPGSPHVDGSLTTAANTTVALGDASGADGNTLTAGVHSARLSEREVGSRMAGEKEKLKTEATILPSLPSLERSLGGNAERVVQELLPLFKRDEPSDTKEPEKGAAPTHAGELKRKRIHREEERARFTQMYATAKSNRERALKLLETNPPLEMIMGAGGRSSARPRGSILGSKIGTPTVPDNDFSLEYDGVGNRGRIASLVPSHLLITDAEKLVEGDPVEEYGSLWEKKKRALSGFDFDDARSEGTRTYGRGFSSLSIQSDPYTIEDGASVSSAAENYQALVPYGGAGGAGAGRIAEEDDGDGVLSAPSDVPRIEAGPVIVPLTMGTLLETEHLPIKKATIPPRMWKVI* # PASA_UPDATE: g6498.t1, single gene model update, valid-1, status:[pasa:asmbl_4336,status:12], valid-1 NODE_244_length_29507_cov_40.7827 . gene 15129 16332 . - . ID=g6498;Name=g6498.t1 NODE_244_length_29507_cov_40.7827 . mRNA 15129 16332 . - . ID=g6498.t1;Parent=g6498;Name=g6498.t1 NODE_244_length_29507_cov_40.7827 . five_prime_UTR 16277 16332 . - . ID=g6498.t1.utr5p1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . exon 16244 16332 . - . ID=g6498.t1.exon1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . CDS 16244 16276 . - 0 ID=cds.g6498.t1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . exon 16051 16153 . - . ID=g6498.t1.exon2;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . CDS 16051 16153 . - 0 ID=cds.g6498.t1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . exon 15881 15947 . - . ID=g6498.t1.exon3;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . CDS 15881 15947 . - 2 ID=cds.g6498.t1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . exon 15690 15777 . - . ID=g6498.t1.exon4;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . CDS 15690 15777 . - 1 ID=cds.g6498.t1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . exon 15129 15293 . - . ID=g6498.t1.exon5;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . CDS 15165 15293 . - 0 ID=cds.g6498.t1;Parent=g6498.t1 NODE_244_length_29507_cov_40.7827 . three_prime_UTR 15129 15164 . - . ID=g6498.t1.utr3p1;Parent=g6498.t1 #PROT g6498.t1 g6498 MFACVAVIGKNNNPLYLHAIGGQSANDELKFHYIVHTSLDVVEERVVSVKSSNDQYLGLLYPTDEYKVYGYITNTKVKFIVVVEDSESTVKEADIKGFFRKLHVLFVDMACNPFYTPGEKITSKAFHNSLVNIVPKANA* # ORIGINAL: g6500.t1 original gene structure, not modified by PASA NODE_244_length_29507_cov_40.7827 AUGUSTUS gene 20847 22525 . - . ID=g6500;Name=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS mRNA 20847 22525 . - . ID=g6500.t1;Parent=g6500;Name=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 22408 22525 . - . ID=g6500.t1.exon1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 22408 22525 . - 0 ID=cds.g6500.t1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 22243 22305 . - . ID=g6500.t1.exon2;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 22243 22305 . - 2 ID=cds.g6500.t1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 21911 22108 . - . ID=g6500.t1.exon3;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 21911 22108 . - 2 ID=cds.g6500.t1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 21561 21692 . - . ID=g6500.t1.exon4;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 21561 21692 . - 2 ID=cds.g6500.t1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 21238 21338 . - . ID=g6500.t1.exon5;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 21238 21338 . - 2 ID=cds.g6500.t1;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 20847 20975 . - . ID=g6500.t1.exon6;Parent=g6500.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 20847 20975 . - 0 ID=cds.g6500.t1;Parent=g6500.t1 #PROT g6500.t1 g6500 MSTAGAPTRNASRVSSRMSSKTTASNSSQYSDSTQKLMKQMMKDAKLTPFQQRQLEAKMKSGETLPSSCNPHNSKYDQENFGIPILSVEPESKKIDVRTYAGGVKSLDTILASDAFEPDTFKPAPGKDHEKEKQRLQKVMYTGRDSLKKKKTPKRTTGAAPIRELDPFDEILEEIEERRAFLDDMYRLGKGKEYDAKIRSEISQRIRQLEVIDRDRSKELASLEPPVHAVPEPGATNAAALLAQSR* # PASA_UPDATE: g6497.t1, single gene model update, valid-1, status:[pasa:asmbl_4335,status:12], valid-1 NODE_244_length_29507_cov_40.7827 . gene 11663 14267 . - . ID=g6497;Name=g6497.t1 NODE_244_length_29507_cov_40.7827 . mRNA 11663 14267 . - . ID=g6497.t1;Parent=g6497;Name=g6497.t1 NODE_244_length_29507_cov_40.7827 . five_prime_UTR 14232 14267 . - . ID=g6497.t1.utr5p1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 14143 14267 . - . ID=g6497.t1.exon1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 14143 14231 . - 0 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 13958 14001 . - . ID=g6497.t1.exon2;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 13958 14001 . - 1 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 13775 13827 . - . ID=g6497.t1.exon3;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 13775 13827 . - 2 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 13522 13628 . - . ID=g6497.t1.exon4;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 13522 13628 . - 0 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 13087 13223 . - . ID=g6497.t1.exon5;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 13087 13223 . - 1 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 12731 12823 . - . ID=g6497.t1.exon6;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 12731 12823 . - 2 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 12535 12604 . - . ID=g6497.t1.exon7;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 12535 12604 . - 2 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 12294 12391 . - . ID=g6497.t1.exon8;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 12294 12391 . - 1 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 12034 12145 . - . ID=g6497.t1.exon9;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 12034 12145 . - 2 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . exon 11663 11895 . - . ID=g6497.t1.exon10;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . CDS 11697 11895 . - 1 ID=cds.g6497.t1;Parent=g6497.t1 NODE_244_length_29507_cov_40.7827 . three_prime_UTR 11663 11696 . - . ID=g6497.t1.utr3p1;Parent=g6497.t1 #PROT g6497.t1 g6497 MGKSKAHGRGGHGGGGRGGGAGSHKTKHGRDGGRQYRDGQSIEEDEHGESATPKFPLPLGMWDFDQCDPKKCSGKKLERFGYVKELKLTQRFTGLILSPIGSKTVSPADRDIIGEHGMAVVDCSWARLADVPFAKMRGDHPRLLPFLVAANPVNYGRPCKLSCVEAFAAAFYITGFKELGAQLLGKFKWGMSFYNLNEELLDLYAACEDSPDVINVQQKWLADCATRPSKAIDMPDSDDEDDDCDEGGDMRSHNPNRSVHLPGRSWKTMESDDDETDEDEEGEEGEEGKESDGSDEDEEGEGSNASGESDEGEKAQEGDAAATATDGHPSRKS* # PASA_UPDATE: g6499.t1, single gene model update, valid-1, status:[pasa:asmbl_4334,status:12],[pasa:asmbl_4339,status:12], valid-1 NODE_244_length_29507_cov_40.7827 . gene 16585 20279 . + . ID=g6499;Name=g6499.t1 NODE_244_length_29507_cov_40.7827 . mRNA 16585 20279 . + . ID=g6499.t1;Parent=g6499;Name=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 16585 17421 . + . ID=g6499.t1.exon1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 16585 17421 . + 0 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 17646 17685 . + . ID=g6499.t1.exon2;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 17646 17685 . + 0 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 17884 18026 . + . ID=g6499.t1.exon3;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 17884 18026 . + 2 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 18185 18321 . + . ID=g6499.t1.exon4;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 18185 18321 . + 0 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 18504 18559 . + . ID=g6499.t1.exon5;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 18504 18559 . + 1 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . exon 18754 20279 . + . ID=g6499.t1.exon6;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . CDS 18754 20168 . + 2 ID=cds.g6499.t1;Parent=g6499.t1 NODE_244_length_29507_cov_40.7827 . three_prime_UTR 20169 20279 . + . ID=g6499.t1.utr3p1;Parent=g6499.t1 #PROT g6499.t1 g6499 MSNKQEVVHYRRIDELQRCSIVANRASKLPNDASVWWRSEVLHCTRRGWRAKETEGLTGDGRRARATLRGINAEFDSDACALPAIHRRSISREQHLIHGPTPRNHWETATWSSVGEAAASTSAAALSSRPLGSTGNTDCSANIRDASSKKTPFLPPVFDAADFFSCARALPSIGATHLDETHPTRRDGFAPQRRMRQNARHLDMASDGTERVGASVAVDGETAAFGASMDESHGAPLPVEGAATNAAGSHVTFSTQTRRLGAFVRSEVVAFPTPGSIQKVPSFRSGIKQGAHGTKSVHKEQRMTLPSNALPFVPDKNSRSVQIGAPFKQFKSVERHLEYTMPRGVPPQMRHAQEIREQLVLANAIAFHDDSARRRINMHAKLKAGKLEPLMASHMRQRVVLYGEGAGVTASPSPVHDRPVDGLITLSISKGLWPRGLDGDGVTAASLALRGSPSIPPSRYSPSPELTGYGRVFDGDESMTRPGIEVFVQARLASGSNSRTLFADDDAKAKPIETPLGSTRDGLHNGATGENEESAQTTELSGEVLAGDALSDASDESDDSEARDASADEKSPLDDVGVEQAVDQSEDVHGAIDATEHADGISTSEGTTIDENVVSWDGPRVGEDGTVPPEAQIPLDGDVDVQGGEVHASSDDVGTDDTAARVLADAHEDVNDGTSDGVGDAPVSSTIIEAADVHGEATDATHDAGEEKVAGSEILEGGDLSHGATSAPHNDEDFLANANIIDAGQSATADVDIGTDAPSAAPATDPAIEPTTEKEVVHASPDSVVETAETTADTAVGDGDNVAVDVSVDAQENASVDPDHVHTDSEESGAGSGGDSGIEAPPAAEQQPQTDDVQVDDGGLNGGDMDVATEAVVAS* # ORIGINAL: g6494.t1 original gene structure, not modified by PASA NODE_244_length_29507_cov_40.7827 AUGUSTUS gene 2726 7301 . + . ID=g6494;Name=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS mRNA 2726 7301 . + . ID=g6494.t1;Parent=g6494;Name=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 2726 4293 . + . ID=g6494.t1.exon1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 2726 4293 . + 0 ID=cds.g6494.t1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 4565 4717 . + . ID=g6494.t1.exon2;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 4565 4717 . + 1 ID=cds.g6494.t1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 6201 6250 . + . ID=g6494.t1.exon3;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 6201 6250 . + 1 ID=cds.g6494.t1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 6509 6561 . + . ID=g6494.t1.exon4;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 6509 6561 . + 2 ID=cds.g6494.t1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 6681 6866 . + . ID=g6494.t1.exon5;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 6681 6866 . + 0 ID=cds.g6494.t1;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 7059 7301 . + . ID=g6494.t1.exon6;Parent=g6494.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 7059 7301 . + 0 ID=cds.g6494.t1;Parent=g6494.t1 #PROT g6494.t1 g6494 MSDAYSNPSAPVRPGAASSTDASGRPLSNDDFRKLLMTPRSVSGQTPSGGSAGGEGFKVPFTPRRVEQGGSSKAAQDAKAKKKSYFKPKKEEVEDDNSKYRDRASERRQGLNIDYKDTDQLLDAYQSASVGDDGSGGVSKRDKVIQESKFLGGDMEHTHLVKGLDFALLQKVRSELDREYGDDTSAKKGEGKKSQQQNEPGKFVEELTFRTTLGRSIHRIAVDFKAPERNEMFSPGRMAFVFELEGGDGTSDIPTTVVRSKADMPQQQQQQGEKAASTNDIVINKLTQILALMRQGSRLQQKTKKKKEKTEDSRPARLPEPPKPLPKLPADVSMNLYDDVVGEYTPPTKPTKTAAAAPHAHAGGYFAGIDQQEDPTVGGGFAPGPMSAPELLLMAGASTNTLVSNMGDVMPMRSSAGTDLYHQQQQQQQQQQQHQIDEKKKADKETEERLRRQDVNYIPDSYMECYPGVYESTDVIADSDEEVDYSKMETTGSDVRKIQKSRFDFDTEEEYNAYMLNREALPRAAFQFGVKMGEGRKTRRNKGDLTEKQKIDRDLQRINALISKRKSGDTSSDSGDGGIRWAYHRATDVKGDTQPTKMQNQLAALQAMPTGMSLQHPLLAPTQYARMPQTNELLEEEPLYVNAKQYHRILKRRQARAKLEAENKLPKTRKPYLHESRHKHAMRRHRGEGGRFNPAKGGAQTPLPTLQQFQMQQQQQQFVMPLQQLQQATKPGAQFAEVTAPASKGKKSAK* # ORIGINAL: g6493.t1 original gene structure, not modified by PASA NODE_244_length_29507_cov_40.7827 AUGUSTUS gene 74 1354 . - . ID=g6493;Name=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS mRNA 74 1354 . - . ID=g6493.t1;Parent=g6493;Name=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 1235 1354 . - . ID=g6493.t1.exon1;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 1235 1354 . - 0 ID=cds.g6493.t1;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 818 1003 . - . ID=g6493.t1.exon2;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 818 1003 . - 0 ID=cds.g6493.t1;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 373 511 . - . ID=g6493.t1.exon3;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 373 511 . - 0 ID=cds.g6493.t1;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS exon 74 172 . - . ID=g6493.t1.exon4;Parent=g6493.t1 NODE_244_length_29507_cov_40.7827 AUGUSTUS CDS 74 172 . - 2 ID=cds.g6493.t1;Parent=g6493.t1 #PROT g6493.t1 g6493 MPDILCEGWLQKRKDMTLHGWKNRYCTLRRDSLVYSASKTDTAEKGHVMLAGARVVCDLQGVKYGFAIVSISPEVPSYHIKAETEEDMRRWIAALSKAIDALCDDKADTPQNLLLKSREKDRRGSAGSLIKSLSRSMSMGFLSKRKGSAASLQRSNSTVEGGPQEAPLSRNPLALASDQAL # PASA_UPDATE: g6501.t1, single gene model update, valid-1, status:[pasa:asmbl_4337,status:12], valid-1 NODE_244_length_29507_cov_40.7827 . gene 23308 29200 . - . ID=g6501;Name=g6501.t1 NODE_244_length_29507_cov_40.7827 . mRNA 23308 29200 . - . ID=g6501.t1;Parent=g6501;Name=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 29150 29200 . - . ID=g6501.t1.exon1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 29150 29200 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 28836 28919 . - . ID=g6501.t1.exon2;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 28836 28919 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 28495 28605 . - . ID=g6501.t1.exon3;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 28495 28605 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 28089 28232 . - . ID=g6501.t1.exon4;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 28089 28232 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 27636 27827 . - . ID=g6501.t1.exon5;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 27636 27827 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 27254 27391 . - . ID=g6501.t1.exon6;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 27254 27391 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 26967 27073 . - . ID=g6501.t1.exon7;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 26967 27073 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 26613 26769 . - . ID=g6501.t1.exon8;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 26613 26769 . - 1 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 25948 26460 . - . ID=g6501.t1.exon9;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 25948 26460 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 25509 25738 . - . ID=g6501.t1.exon10;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 25509 25738 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 25134 25258 . - . ID=g6501.t1.exon11;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 25134 25258 . - 1 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 24787 24995 . - . ID=g6501.t1.exon12;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 24787 24995 . - 2 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 24349 24479 . - . ID=g6501.t1.exon13;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 24349 24479 . - 0 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 24040 24126 . - . ID=g6501.t1.exon14;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 24040 24126 . - 1 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 23739 23858 . - . ID=g6501.t1.exon15;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 23739 23858 . - 1 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . exon 23308 23572 . - . ID=g6501.t1.exon16;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . CDS 23377 23572 . - 1 ID=cds.g6501.t1;Parent=g6501.t1 NODE_244_length_29507_cov_40.7827 . three_prime_UTR 23308 23376 . - . ID=g6501.t1.utr3p1;Parent=g6501.t1 #PROT g6501.t1 g6501 MGSESRKPPEQLPIVLQVLLSQGHRLRALELLGRFLDLGPWAVNLALSVGIFPYVLKLLQSNAPELRQVLVFIWAKILAVDKSCQSDLIKDHSHKYFIAMLSSITPIPSEQRTMAVFVLTVIVNGHRAGQESCLNGGVISSCLEQLGDPDPLLRQWLCLCLGKLWCGFDAARWCGVRDNAHEKLCALLTDGVPEVRAAAVYALGTFIGNSDRSDQITSIEHNIGITLLVVTADSSAMVRKELVIALSNLVSHFESKFRVAALELLEEDLQQSGEARLTDEDERRKLAASLNYVSVYPCIWKMLLNLSVDPFPEVADLAQHIVDSINIQVVVPVAVSSPATSKSKRKSKRQEVQMQQQQLAAQQAQMQLLAGGKPGSRSSAVLGPNPSGGAGSSSSFVPSSSTGMTRVSSGTRLNRPHSALVGDGETAVVAASHVTTSPIVRPESPMWKAADPHATPAPQYRAVPFSDLTEKANTRTDSIALESQLYEWSCERFRCPIMRPRDEDDWGSPMYQERAWRVGRNSSVREVARQEYEVARKCRLDNQVALLDNEPEMASLSVFHPYEPYLAVADEKDGISMWNWEEGSRANTFHNCNPYGSRITALKFLNDHDRALLCVGSDEGVVRIWRNPEHGQATELVSSWRALSEVLRSGRGAGVVVDWEQETGHLLASGDAVVIRVWNAERELIVQDIPTQAGACLTSMSCDKIGNSLLVAGFGDGTVRLYDRRLKPRESMVMLLQEHKGWVTNVHLQKGGNRELISGSVMGDIKFWDPRFAESVKTIEAHHSKMTALAVHDYAPVIASGSQNQYIKVFNTDGDTLSMIRYHDGFLGQRIGPVSCLAFHPHRMFLAAGSTDSILSIYSMVKET* # PASA_UPDATE: g6496.t1, single gene model update, valid-1, status:[pasa:asmbl_4338,status:3], valid-1 NODE_244_length_29507_cov_40.7827 . gene 10399 11569 . + . ID=g6496;Name=g6496.t1 NODE_244_length_29507_cov_40.7827 . mRNA 10399 11569 . + . ID=g6496.t1;Parent=g6496;Name=g6496.t1 NODE_244_length_29507_cov_40.7827 . five_prime_UTR 10399 10590 . + . ID=g6496.t1.utr5p1;Parent=g6496.t1 NODE_244_length_29507_cov_40.7827 . exon 10399 11569 . + . ID=g6496.t1.exon1;Parent=g6496.t1 NODE_244_length_29507_cov_40.7827 . CDS 10591 11262 . + 0 ID=cds.g6496.t1;Parent=g6496.t1 NODE_244_length_29507_cov_40.7827 . three_prime_UTR 11263 11569 . + . ID=g6496.t1.utr3p1;Parent=g6496.t1 #PROT g6496.t1 g6496 MQDPVEGLRVTHVDVVLRTCALQIQQRGLWSPLLADTFESVKRILLPSCIPSSVDGSDVDGAQQQQQQHRQQQAFAEAIHAAIHPNTTDVLSNNGRLMPAVPAKKRNQPSSARSKGPGRRGASMAKALKVLHPPETITELVRQWEEGTSSCPPLSQWTRDMRQDKKASLAHSKRKVVYLAFVGCNRDLSEFEARYGAWSCFTAMHREISRQNAAARITNARTP* # PASA_UPDATE: g10731.t1, single gene model update, valid-1, status:[pasa:asmbl_629,status:12], valid-1 NODE_116_length_38248_cov_39.7099 . gene 2 1313 . + . ID=g10731;Name=g10731.t1 NODE_116_length_38248_cov_39.7099 . mRNA 2 1313 . + . ID=g10731.t1;Parent=g10731;Name=g10731.t1 NODE_116_length_38248_cov_39.7099 . exon 2 163 . + . ID=g10731.t1.exon1;Parent=g10731.t1 NODE_116_length_38248_cov_39.7099 . CDS 2 163 . + 0 ID=cds.g10731.t1;Parent=g10731.t1;5_prime_partial=true NODE_116_length_38248_cov_39.7099 . exon 375 497 . + . ID=g10731.t1.exon2;Parent=g10731.t1 NODE_116_length_38248_cov_39.7099 . CDS 375 497 . + 0 ID=cds.g10731.t1;Parent=g10731.t1 NODE_116_length_38248_cov_39.7099 . exon 682 1313 . + . ID=g10731.t1.exon3;Parent=g10731.t1 NODE_116_length_38248_cov_39.7099 . CDS 682 891 . + 0 ID=cds.g10731.t1;Parent=g10731.t1 NODE_116_length_38248_cov_39.7099 . three_prime_UTR 892 1313 . + . ID=g10731.t1.utr3p1;Parent=g10731.t1 #PROT g10731.t1 g10731 PLPPGPSLSTVHYCAVENSGNFQRFRITEYPPDLAKKITLLKYFQSYMNEHLVKAGSADLHIDDQSSLVEMPCHVMKWLRTKHAIIFRLSKSIIQMNFFDHTKVIVSTGSRTVTLIDKSRNASTYTLTDAASGSVPELQSRLKYCKGVLEHLIAGDDAKIQVKA* # ORIGINAL: g10739.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 37254 38085 . + . ID=g10739;Name=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 37254 38085 . + . ID=g10739.t1;Parent=g10739;Name=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 37254 37317 . + . ID=g10739.t1.exon1;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 37254 37317 . + 0 ID=cds.g10739.t1;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 37492 37589 . + . ID=g10739.t1.exon2;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 37492 37589 . + 2 ID=cds.g10739.t1;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 37714 37836 . + . ID=g10739.t1.exon3;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 37714 37836 . + 0 ID=cds.g10739.t1;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 37969 38085 . + . ID=g10739.t1.exon4;Parent=g10739.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 37969 38085 . + 0 ID=cds.g10739.t1;Parent=g10739.t1 #PROT g10739.t1 g10739 MSSEKRHHDGEGSTSAKRPRTVGEPFTYGGKIESLTVRDIRFPTSKEQHGTDAMHTDPDYSAAYVVVNVSPHLAATQGHGLSFTLGRGTEVVVCGIRSLERLIVGRSLDSIFNNFAGFWREITSESQLRWVST* # ORIGINAL: g10736.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 14230 20078 . - . ID=g10736;Name=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 14230 20078 . - . ID=g10736.t1;Parent=g10736;Name=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 19950 20078 . - . ID=g10736.t1.exon1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 19950 20078 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 19654 19791 . - . ID=g10736.t1.exon2;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 19654 19791 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 19326 19433 . - . ID=g10736.t1.exon3;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 19326 19433 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 19054 19134 . - . ID=g10736.t1.exon4;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 19054 19134 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 18755 18826 . - . ID=g10736.t1.exon5;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 18755 18826 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 18339 18468 . - . ID=g10736.t1.exon6;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 18339 18468 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 17945 18217 . - . ID=g10736.t1.exon7;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 17945 18217 . - 2 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 17403 17669 . - . ID=g10736.t1.exon8;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 17403 17669 . - 2 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 16880 17074 . - . ID=g10736.t1.exon9;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 16880 17074 . - 2 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 16445 16601 . - . ID=g10736.t1.exon10;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 16445 16601 . - 2 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 16008 16272 . - . ID=g10736.t1.exon11;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 16008 16272 . - 1 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 15493 15636 . - . ID=g10736.t1.exon12;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 15493 15636 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 15072 15164 . - . ID=g10736.t1.exon13;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 15072 15164 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 14687 14806 . - . ID=g10736.t1.exon14;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 14687 14806 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 14230 14433 . - . ID=g10736.t1.exon15;Parent=g10736.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 14230 14433 . - 0 ID=cds.g10736.t1;Parent=g10736.t1 #PROT g10736.t1 g10736 MAVRASAQDVLRDAGVSFGDGVLSPETVDASVGRLQRRIVEVKGQVYETVNKHYGEFVHTYNTTTDLKSELNALARAVENIGRKIDQPETGLHNRITNGAATYQSLRGQLEATDLTIAVLSKLCEVHDILRTFDDDLDSKEYTKLSKAVQRGALLLGELAPETENGCEPKIFAAARAEFRRKKSKLKAKLEDVWARSIGVTVADSPAKNELKILYTGSTDAQNQYVACSAVDVVPPMCAMGILDARVASFARTFFKCVIAPIISSTVASQGKDGQTVVSGLSPVVRATKQSAVLGLQETKSQSTAEHKLSDELFTRIAKAIEFVLRHVFGATPDVISADDASPQAVAARAFGEKLWPELSQAIISGILSESIPRTSAELRGYDAIARRATEFEEALAGIGFLKAGTSTLTAYTRDINVHFANKKREELLVAARDLVTAVDGATIEVGISPSASVDAAFAATHQSEPMGLDVSLASKTGGLHSGTFVFPKGRVLASTAQLIDLCEQALIEAGTATPQCAVQLYATTRDCLDIFRAVVPIVHEEALRTNPQRGALFYTDCHYIAHRLLTLAHLHRRSLPAPLDTTATYVDLVLPLRSLGVTCFDAMLVRQRDVLVGCIKNAKGFHDTFDEDRHVAVESAVTLAVAQLESLSASWKTVLPRDIYFKSMATLTDCVLERIAVEVMALEDISEDETHQLHSIMRLVSDSVPSFFEVTERPMHKKPIIDKVDMSKAILGWDRFLQLAQILETSLADIVSKWTTARSTVKFSPAELKLLVKALFSDTPQRQQALQTFK* # PASA_UPDATE: g10734.t1, single gene model update, valid-1, status:[pasa:asmbl_632,status:3], valid-1 NODE_116_length_38248_cov_39.7099 . gene 7080 8263 . - . ID=g10734;Name=g10734.t1 NODE_116_length_38248_cov_39.7099 . mRNA 7080 8263 . - . ID=g10734.t1;Parent=g10734;Name=g10734.t1 NODE_116_length_38248_cov_39.7099 . five_prime_UTR 8190 8263 . - . ID=g10734.t1.utr5p1;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . exon 8122 8263 . - . ID=g10734.t1.exon1;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . CDS 8122 8189 . - 0 ID=cds.g10734.t1;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . exon 7806 7964 . - . ID=g10734.t1.exon2;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . CDS 7806 7964 . - 1 ID=cds.g10734.t1;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . exon 7080 7519 . - . ID=g10734.t1.exon3;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . CDS 7345 7519 . - 1 ID=cds.g10734.t1;Parent=g10734.t1 NODE_116_length_38248_cov_39.7099 . three_prime_UTR 7080 7344 . - . ID=g10734.t1.utr3p1;Parent=g10734.t1 #PROT g10734.t1 g10734 MKYEVVHPIEDCPHAASFCWTGSVEDAVTSLAQHCVKCNAEYELWHCLAPECNVVACGRGLAAHMVEHNKEARAHNLVISLADLSFWCYGCNSYVTSPSLQPPFAAFHVAKFGEEPPPLHEPSLLLHIAGPSS* # ORIGINAL: g10737.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 20673 32565 . + . ID=g10737;Name=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 20673 32565 . + . ID=g10737.t1;Parent=g10737;Name=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 20673 20985 . + . ID=g10737.t1.exon1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 20673 20985 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 21112 21276 . + . ID=g10737.t1.exon2;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 21112 21276 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 21428 21514 . + . ID=g10737.t1.exon3;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 21428 21514 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 21645 22017 . + . ID=g10737.t1.exon4;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 21645 22017 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 22265 22364 . + . ID=g10737.t1.exon5;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 22265 22364 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 22645 22757 . + . ID=g10737.t1.exon6;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 22645 22757 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 22975 23086 . + . ID=g10737.t1.exon7;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 22975 23086 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 23298 23454 . + . ID=g10737.t1.exon8;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 23298 23454 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 23738 23813 . + . ID=g10737.t1.exon9;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 23738 23813 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 23999 24132 . + . ID=g10737.t1.exon10;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 23999 24132 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 24231 24397 . + . ID=g10737.t1.exon11;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 24231 24397 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 24549 24712 . + . ID=g10737.t1.exon12;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 24549 24712 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 24908 25024 . + . ID=g10737.t1.exon13;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 24908 25024 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 25194 25362 . + . ID=g10737.t1.exon14;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 25194 25362 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 25554 25752 . + . ID=g10737.t1.exon15;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 25554 25752 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 25941 26017 . + . ID=g10737.t1.exon16;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 25941 26017 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 26211 26355 . + . ID=g10737.t1.exon17;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 26211 26355 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 26538 26678 . + . ID=g10737.t1.exon18;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 26538 26678 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 26939 26998 . + . ID=g10737.t1.exon19;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 26939 26998 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 27151 27280 . + . ID=g10737.t1.exon20;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 27151 27280 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 27533 27641 . + . ID=g10737.t1.exon21;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 27533 27641 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 28039 28123 . + . ID=g10737.t1.exon22;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 28039 28123 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 28381 28485 . + . ID=g10737.t1.exon23;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 28381 28485 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 28697 28766 . + . ID=g10737.t1.exon24;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 28697 28766 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 28989 29172 . + . ID=g10737.t1.exon25;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 28989 29172 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 29461 29568 . + . ID=g10737.t1.exon26;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 29461 29568 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 29937 30081 . + . ID=g10737.t1.exon27;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 29937 30081 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 30324 30469 . + . ID=g10737.t1.exon28;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 30324 30469 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 30758 30828 . + . ID=g10737.t1.exon29;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 30758 30828 . + 0 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 30979 31124 . + . ID=g10737.t1.exon30;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 30979 31124 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 31370 31468 . + . ID=g10737.t1.exon31;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 31370 31468 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 31721 31796 . + . ID=g10737.t1.exon32;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 31721 31796 . + 2 ID=cds.g10737.t1;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 32010 32565 . + . ID=g10737.t1.exon33;Parent=g10737.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 32010 32565 . + 1 ID=cds.g10737.t1;Parent=g10737.t1 #PROT g10737.t1 g10737 MALAEYHALRSRALDAIESLGFTLAFAAEDGEDVEMRDADAPTTHGRKWEDDVWAAGFHERPDVSVLPEFVAALIGGGKGAADVHLSALSDVIRKWKGLGETPKEFWSIFSDSGTSVRGVVALLHCIVLGTDARQSRTPAEFHSASLAACVYVSLLGIDGCQAYGIFQPLLLRRCVDLVRVLGKSAIAAHMVILVLAGSDKGKSKAAGAKKAVARKAPRAIAGGADMLNNDDDSDDAMDCDKPDDAHDGAADVSKYAHSVKCLSSLLGLVASNAGQIVAQADDSCVTHLIEVAAAVVSERTDDTTTRENAVFGAAANLSNPIDAGYATLAAFCGDDKGVRSHVLSKVFKVLIPGITMVRGGPLAAAAIPKGLQNANRDATAFVCHCMERFGDAAGQSAVALVQHVAIKVPDRAEYKSRISESIGAIVSSLSGAHFLNIVTWFIKYSRNAKVGYRSFAVEIAETVLTRANIREKVGDAWEAAAESLIKMVVARSSDKAPTVRTKALGGFSAIANFAHTSAHAELSDIVSRCMFAVNAGDDVVCAGVTGSPASPSMTSGASRVSLSANGSVSTSMSGVAYPQIVRKRMSDDKQSVRKAAIMALESLCAFEKRPPTNEERALLYDRAIDAVLSVRKQALHSVTTLLSLFGKDAVVVRMWLECALPLIADSEATVQEKCLAAIDEIILCNVVSQDASASEFAWNIVASMTSPDLPECPRYLQRACQMWRRDGRLTKAVVDAIASKAMATEPAKGAWMIFAEVACADDSLVNCDAVVAYYNSNLRGSIDSADGDTPIHVLRVVGYCADRVVRNKTAASIRDDLVSTLKRFRSSPAYIATIMQTLSKLFHASSVGKAASSPATDRSWMSALAKECHRELSAIVYGVTGSANVNANDLPAERVTRLLFTLGESSQMSRVAELADVDILVESFIAPSLKKQTVSGETIEVPIAAAVRAHAFVALGKLCLQNEDTAKKCVAAMARELETCDDAVIRNNIVVVMCDLCIRYTMLIDRYIPNIASCLRDPSPLVRRQTLMLLTRLLQEDYVKWKGVLFYRFSMALVDDSAEVRRFAKYCLVNVLLGKNPLMFQSHFVESIFHFNRCNAHSVYNQFSQTEREKAMFDLHGPLNAGKRRQIYAVLLQSMPDDQRFNITARLSSDVLSMYAEGTLDARDTEEGSAAVLEDSLWVLSSKDVKLAAAKSRAAEDAADDGDAAGAAIAQAKTKFVSQIVKKNVVENIIPVTIALKRQLEESHSPLLGNVMAFIAEIMKDYKDEVSDVLAGDRQLASEIEFDMRRFEESERMRASRRSPAPNALNGSGLFSPNMTNSPLLSPSILGSPKISTPKLKSQGARRGSAGGASELARLAVSHSLAQAASTPAKRASVVGPTFSTPESAAVRGRPFGINNVSAIAPSPFPSAIPSRVFSDAAIGPASVTKRGTPGNKADRDILCFPSPDTPVPKPRQWNITSPAPAKTSSPDASSVIREKRARPDATPTRPTTKAVDGKDGKVKEGRSPGRSPTPRRPRRNESDRGGRTRPSGTATAADRDCIGGSDEDSDHMDVENRANGVSVGVVVGNVPRAAAAHSAGAEKGAAVVGRGTAVAAVDGVDVDMDADMGGMSDDGGVTACLGQPGYIRQPMLNE* # ORIGINAL: g10732.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 2099 3710 . - . ID=g10732;Name=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 2099 3710 . - . ID=g10732.t1;Parent=g10732;Name=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 3664 3710 . - . ID=g10732.t1.exon1;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 3664 3710 . - 0 ID=cds.g10732.t1;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 3231 3357 . - . ID=g10732.t1.exon2;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 3231 3357 . - 1 ID=cds.g10732.t1;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 2721 2939 . - . ID=g10732.t1.exon3;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 2721 2939 . - 0 ID=cds.g10732.t1;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 2099 2350 . - . ID=g10732.t1.exon4;Parent=g10732.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 2099 2350 . - 0 ID=cds.g10732.t1;Parent=g10732.t1 #PROT g10732.t1 g10732 MATSNGLKVVVLGAEKTGKTSLINQYVYKKFSSDYVPSTTLTIHEKHYIGNNGPISVKILDAPGSETALRDAASSFMGVDACILVYDVADDTSFEALEELKDFFLEESGVESPADFMVVLVGNKSDLEDRAITHLDVQAWCAENKAHSHHLVSAKTSVSVVAAFTAGIESALARRPDLGGVTREAGSRRGSATRKRSTSSRTEFKEADEEHAAA* # ORIGINAL: g10733.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 5604 6860 . + . ID=g10733;Name=g10733.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 5604 6860 . + . ID=g10733.t1;Parent=g10733;Name=g10733.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 5604 6860 . + . ID=g10733.t1.exon1;Parent=g10733.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 5604 6860 . + 0 ID=cds.g10733.t1;Parent=g10733.t1 #PROT g10733.t1 g10733 MSMLAETRKKLKWSQDPNNKFWENDESRFGLKMMSKMGWSKGKGLGAQENGSQAHVKISKKSDNRGIGAVAASSDNWLETQDAYNSLLAQLNKNVASGVDAKAAAVVDQAKSLREKSDASRRIFYSKFLRNKEASNYSSDDMAMILGVKPSSATASGAATPKADDSSETKSEDSTSHVKTTTSSSDMHSYFAQRMAALGYASASGAASTGKKAVSSGDSSSRSDKSDDASEEAPRAAFQASDAESGRKRKRSESESSDGEDREKEKKKRKAEKKEKKEKKKEVKREKKEKKEAKEAKEKKDKREKGEKGKKKDEVTEEKSQGKGSTGTKEKKEMKEKKEKKEKKEKKEKREKKEKKEKEEKKGNERKAGKEKEGERDTKAKVAEDDAAVAAKKDRRAKRKADTDEAPASKKSRCSHAE* # ORIGINAL: g10735.t1 original gene structure, not modified by PASA NODE_116_length_38248_cov_39.7099 AUGUSTUS gene 8700 13493 . + . ID=g10735;Name=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS mRNA 8700 13493 . + . ID=g10735.t1;Parent=g10735;Name=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 8700 8909 . + . ID=g10735.t1.exon1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 8700 8909 . + 0 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 9119 9187 . + . ID=g10735.t1.exon2;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 9119 9187 . + 0 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 9374 9478 . + . ID=g10735.t1.exon3;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 9374 9478 . + 0 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 10022 10173 . + . ID=g10735.t1.exon4;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 10022 10173 . + 0 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 10463 10563 . + . ID=g10735.t1.exon5;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 10463 10563 . + 1 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 10931 11051 . + . ID=g10735.t1.exon6;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 10931 11051 . + 2 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 11232 11383 . + . ID=g10735.t1.exon7;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 11232 11383 . + 1 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 11615 11693 . + . ID=g10735.t1.exon8;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 11615 11693 . + 2 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 11942 12135 . + . ID=g10735.t1.exon9;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 11942 12135 . + 1 ID=cds.g10735.t1;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS exon 12340 13493 . + . ID=g10735.t1.exon10;Parent=g10735.t1 NODE_116_length_38248_cov_39.7099 AUGUSTUS CDS 12340 13493 . + 2 ID=cds.g10735.t1;Parent=g10735.t1 #PROT g10735.t1 g10735 MSAAGPMPPGGGPVGASAPMGLPGTIISGQSGNRFFVSRQPTVLFDGKRMRKAVQRRTVDYNATVVRTVENRKWKRPIEDNSILPPDEAYYREMEAPVGTPLQPAWCIMSKFVHTSINKVRCPVFTARAHETAVRAMVWSHDSNWMVTGDHEGSVKYWQSNMNNVKMFRAHKDPIREISMAPTDRKLVTCSDDSLLKVFDFGRPEAEPTVLRGHGWDVKTCDWHPQKGLIASGSKDNLVKLWDPRTGNALSTLYGHKNTVMCARWNANGNWLLTASRDQLVRLYDLRTLRELQSFRGHKKEVDSLAWHPIHEELFVSGGSDGSLFYWMAGTEKEVGSIDMAHEGNIWSLAWHPLGHVVASASNDHTTKFWTRNRPGDNMKDKYNLNQPGGDDDDEDDAGGGQESAIPGMAIPFGASVQNARTQFSGGDRPQQRQGQQRFDNNRGGGNFGDRERGGFGRGRGGFDRDGRGGGGGAGGRPGDGREDYGGRGGPPPQGGFGGPPPHNNSQQQGGYPPSLGQQQHQQGPPPHGPPGHHQFGGPHPPPGQGQGQGHPPQGPPNQGGPHGPHPGQQPPPFGHPGGHPGGPPPHFPPGGPPPPQHFGGPPTQPHQPQHPQHPQHPQHPQHPQQGPPGHMQGQFGGPPPPGQYGPPGNQGQGPPPGQYGPPPGQYGPPGAQAQQQPPQGQYGPPPPGQHGHFAPQQGMPPQYPHPQHAQHPGGPPPQGFNPAGGYNQGMPPQQQQQQQQQQQQQGSRPPFPQYGAPPPGGPPQQYGPPPGAQQQRR* # PASA_UPDATE: g10738.t1, single gene model update, valid-1, status:[pasa:asmbl_633,status:3], valid-1 NODE_116_length_38248_cov_39.7099 . gene 33104 36895 . - . ID=g10738;Name=g10738.t1 NODE_116_length_38248_cov_39.7099 . mRNA 33104 36895 . - . ID=g10738.t1;Parent=g10738;Name=g10738.t1 NODE_116_length_38248_cov_39.7099 . five_prime_UTR 36795 36895 . - . ID=g10738.t1.utr5p1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 36792 36895 . - . ID=g10738.t1.exon1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 36792 36794 . - 0 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 36619 36641 . - . ID=g10738.t1.exon2;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 36619 36641 . - 0 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 36207 36370 . - . ID=g10738.t1.exon3;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 36207 36370 . - 1 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 35684 35796 . - . ID=g10738.t1.exon4;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 35684 35796 . - 2 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 35348 35409 . - . ID=g10738.t1.exon5;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 35348 35409 . - 0 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 35123 35178 . - . ID=g10738.t1.exon6;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 35123 35178 . - 1 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 34728 34850 . - . ID=g10738.t1.exon7;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 34728 34850 . - 2 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 34168 34275 . - . ID=g10738.t1.exon8;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 34168 34275 . - 2 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 33701 33837 . - . ID=g10738.t1.exon9;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 33701 33837 . - 2 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . exon 33104 33248 . - . ID=g10738.t1.exon10;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . CDS 33168 33248 . - 0 ID=cds.g10738.t1;Parent=g10738.t1 NODE_116_length_38248_cov_39.7099 . three_prime_UTR 33104 33167 . - . ID=g10738.t1.utr3p1;Parent=g10738.t1 #PROT g10738.t1 g10738 MARNEEKAQSMLSRFRAVQAAEINGPKLRRPFLATECTDLTEAEKWRQQIIREVAKKVSLIQNAGLGEFRIRDLNDEINKLIREKYHWEDRIKELGGPDYRKIGPRMLDHEGREIPGGKGYKYFGAARDLPGVRELFQKELPSAPRKTRGELYRTVDADYYGYRDDDDGVLVPLEAEAEKNARAAAVERWRQQQASGAVPDAEDEADNIYAGGADQPDDDEISEEEKKQMGSYEDGGATRFVAHVPVPSQQDVEQMLLERKRRELLDKYASDELVASEQNSKGLAGGRK* # ORIGINAL: g2507.t1 original gene structure, not modified by PASA NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS gene 1 3971 . - . ID=g2507;Name=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS mRNA 1 3971 . - . ID=g2507.t1;Parent=g2507;Name=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 3821 3971 . - . ID=g2507.t1.exon1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 3821 3971 . - 0 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 3525 3665 . - . ID=g2507.t1.exon2;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 3525 3665 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 3141 3401 . - . ID=g2507.t1.exon3;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 3141 3401 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 2888 3025 . - . ID=g2507.t1.exon4;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 2888 3025 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 2613 2690 . - . ID=g2507.t1.exon5;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 2613 2690 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 2287 2430 . - . ID=g2507.t1.exon6;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 2287 2430 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 2039 2173 . - . ID=g2507.t1.exon7;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 2039 2173 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 1800 1937 . - . ID=g2507.t1.exon8;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 1800 1937 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 1536 1661 . - . ID=g2507.t1.exon9;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 1536 1661 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 611 854 . - . ID=g2507.t1.exon10;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 611 854 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 317 375 . - . ID=g2507.t1.exon11;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 317 375 . - 1 ID=cds.g2507.t1;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 1 99 . - . ID=g2507.t1.exon12;Parent=g2507.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 1 99 . - 2 ID=cds.g2507.t1;Parent=g2507.t1 #PROT g2507.t1 g2507 MSALMNFLAPLSLVRICGTFATCAVGTSGKANCTCFAGYSSSFTNNTNCAPTNNCLKNNGGCGLNMTSMCTMTGPGLSSCQCLDGFISPNGTQRDCRAITMCEKNATYCGENTVCVNVDATSLRCNCTPGTIAVSPTRCRLRTPCDSGNICGQNSTCEAIDTTKYSCQCILDYISDFKNGSFCREPTGCDAVDPCGQYSQCKPNATNPRMAACTCHPGYASDTKDGLGCRAQNNNTAVCTCFAGFKSMAGDGSNCRQTTPCDGDVNPCGLFSKCSSPPNDNTTFACDCDAGYASDSGTAVKDCRLATFCNLNRAYCGAFSSCVSTDALSVTCPCIGAAYLPNADQRSCRAKTDCDDNPCFPEGIATCNVSSTNISISTCSCREGYVADQSSRFCKEKDICDAQPCGRNEVCVKTGARNRTCDCEPKYYRPAESSLCVAIATDTSGGGSGGGGGSGQNIPNGNGNGDSGSSGGSDSGGGSSVPLPMVGGAVGGVVVVAAAVGALIYRYRKNSAHKSLPLWNDEAGREIAVFENPVNVAKARLASGKSTGGGFEMTPFGKRLDGSISTEGLLD # ORIGINAL: g2508.t1 original gene structure, not modified by PASA NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS gene 4779 7316 . - . ID=g2508;Name=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS mRNA 4779 7316 . - . ID=g2508.t1;Parent=g2508;Name=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 5709 7316 . - . ID=g2508.t1.exon1;Parent=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 5709 7316 . - 0 ID=cds.g2508.t1;Parent=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 5072 5516 . - . ID=g2508.t1.exon2;Parent=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 5072 5516 . - 0 ID=cds.g2508.t1;Parent=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS exon 4779 4933 . - . ID=g2508.t1.exon3;Parent=g2508.t1 NODE_2000_length_8163_cov_22.3027_potentialcontaminant AUGUSTUS CDS 4779 4933 . - 2 ID=cds.g2508.t1;Parent=g2508.t1 #PROT g2508.t1 g2508 MAEPPAVDAFNRRKTARVPHFGSPKIMRGRLASVILAVSMMAVIVELPLASAQLYYFSIWTSPANSDSYTSGKVGFTLYGSDSTSATYSLPNIMTRSVNKTVPASNIGTLLALGITPNSDNWRPERIVVTYLTTTYLFKFAATDSLSNTAATPSQVCVCAVPQSPPNGAFDCASTYSKSAANTCVLACNSGYVPSSSAIGVCPTTSAFSTDYLNADAQCVSCAPAVSCASLNRQTCRGVLPNVCGPCKSSYHVTGDTVASTSDSNVMCTPFITYTITLLMSVASGAATDLPCTLSMLGTNGYQSGDPLSLNDPLSGALSLGKTYTYTVQSAFFGYEAVRGLEITCDYKTKGILNPWLPSNIDVSSDDAGLGGATLRYNFLTTDRLDYGTWLLFAPPPSGTPANGKITCTSSFPGYTCAISCATSYAVAGGNGAGGATLPSGSAFPFSTASIDSAKCVPDCSKRNNSYCASLNRQPCGAVVNTCGPCMDGYNTSSRTGLIDGDTACAQFATYDVEIETGMRTITGPSYMTIFGDLGSTDEILVASNGFNASSTFTNSYYGKYIGTNFLTVQFRFVGPPTSWDYWNGGHIVLSYDTDDYWRFYGFPPSTAIQSDTTYTACNAPPNPLNGSFTCDSTLTTASGCSVTCNTPTYTATALASRVYTCRSDGSYRDSSLNALNASQPFCQISNPCTVNGGGCGVNSVCTNPSPAVSKCACTNSSFYSPTADGKNCACEPLV* # PASA_UPDATE: g3007.t1, single gene model update, valid-1, status:[pasa:asmbl_7291,status:12], valid-1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . gene 687 1667 . + . ID=g3007;Name=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . mRNA 687 1667 . + . ID=g3007.t1;Parent=g3007;Name=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . exon 687 912 . + . ID=g3007.t1.exon1;Parent=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . CDS 687 912 . + 0 ID=cds.g3007.t1;Parent=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . exon 1206 1667 . + . ID=g3007.t1.exon2;Parent=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . CDS 1206 1525 . + 2 ID=cds.g3007.t1;Parent=g3007.t1 NODE_4401_length_1667_cov_39.7475_potentialcontaminant . three_prime_UTR 1526 1667 . + . ID=g3007.t1.utr3p1;Parent=g3007.t1 #PROT g3007.t1 g3007 MYSNSVQILSAKNDTGSPAGRAIVAFSLLPDPSGAEVNATTAFANLKALHTNTNSLLYKGTSGASVDTTYPPQAEVLDADPTNNGGTNNNNNNSNNNTGGTGNGAGNGNGGASTGAPVYYQSHGYTGGQVAGIAVGVGAFVAIVMGAVVWKVHTSKKASLDKVSFQMGMSTNALREQSYET* # ORIGINAL: g7506.t1 original gene structure, not modified by PASA NODE_3302_length_3786_cov_41.4964 AUGUSTUS gene 491 3649 . - . ID=g7506;Name=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS mRNA 491 3649 . - . ID=g7506.t1;Parent=g7506;Name=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 3637 3649 . - . ID=g7506.t1.exon1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 3637 3649 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 3361 3510 . - . ID=g7506.t1.exon2;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 3361 3510 . - 2 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 3006 3145 . - . ID=g7506.t1.exon3;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 3006 3145 . - 2 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 2735 2800 . - . ID=g7506.t1.exon4;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 2735 2800 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 2451 2544 . - . ID=g7506.t1.exon5;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 2451 2544 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 1777 2114 . - . ID=g7506.t1.exon6;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 1777 2114 . - 2 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 1402 1500 . - . ID=g7506.t1.exon7;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 1402 1500 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 1014 1139 . - . ID=g7506.t1.exon8;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 1014 1139 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 718 888 . - . ID=g7506.t1.exon9;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 718 888 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 491 598 . - . ID=g7506.t1.exon10;Parent=g7506.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 491 598 . - 0 ID=cds.g7506.t1;Parent=g7506.t1 #PROT g7506.t1 g7506 MDSTTQCLYTALEDNNDGVAQLCANPNAANRIVAALGIEVGDSPELLMIRALAAGILLNSSSVASSLSGTELRPTIVLPLAATLDYNGAAALAGLASTLATIPVVEEPPMHRDLDVGGHGSAKAALSKVQTALEAQQIALEVLTNLCSSDMTAGGDWEDNADSEDDDGAVEDVTSSTGANEADDDAMPSGLAHAIVAVGVPAKVLALCRPAPAVMQVYGSHPQGTMLAERLSSCNVAAITCLGNMLETIGLQAIGVGPLELWQELVQIASLAGKSNERFIEALTGTLWAVLRTATKNGVQIPVDTVGDVSSLLRSPIEAVRVNAAGMLGLFAQQPSAVAGLQEIGDALLWSLFQDTSLDVVSEVLNSIFDGYAEVCGPVVASLQLVQKLQTFLPVLKEKVKDAKRRRMPKAIVGRADDARINLARFIAYKLAQP* # ORIGINAL: g7505.t1 original gene structure, not modified by PASA NODE_3302_length_3786_cov_41.4964 AUGUSTUS gene 2 130 . + . ID=g7505;Name=g7505.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS mRNA 2 130 . + . ID=g7505.t1;Parent=g7505;Name=g7505.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS exon 2 130 . + . ID=g7505.t1.exon1;Parent=g7505.t1 NODE_3302_length_3786_cov_41.4964 AUGUSTUS CDS 2 130 . + 0 ID=cds.g7505.t1;Parent=g7505.t1 #PROT g7505.t1 g7505 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF* # ORIGINAL: g13729.t1 original gene structure, not modified by PASA NODE_1979_length_8230_cov_40.8315 AUGUSTUS gene 3529 3804 . + . ID=g13729;Name=g13729.t1 NODE_1979_length_8230_cov_40.8315 AUGUSTUS mRNA 3529 3804 . + . ID=g13729.t1;Parent=g13729;Name=g13729.t1 NODE_1979_length_8230_cov_40.8315 AUGUSTUS exon 3529 3804 . + . ID=g13729.t1.exon1;Parent=g13729.t1 NODE_1979_length_8230_cov_40.8315 AUGUSTUS CDS 3529 3804 . + 0 ID=cds.g13729.t1;Parent=g13729.t1 #PROT g13729.t1 g13729 MTCATGGIAMPMRKRASFSRFVDIPYVVETSSTASVADLAAAAKNSTASTACACGCSSPLNGRPVITIHSCGQEFGFATMRCYRRWSVCKN* # PASA_UPDATE: g13730.t1, single gene model update, valid-1, status:[pasa:asmbl_3155,status:3], valid-1 NODE_1979_length_8230_cov_40.8315 . gene 4175 7076 . + . ID=g13730;Name=g13730.t1 NODE_1979_length_8230_cov_40.8315 . mRNA 4175 7076 . + . ID=g13730.t1;Parent=g13730;Name=g13730.t1 NODE_1979_length_8230_cov_40.8315 . five_prime_UTR 4175 4393 . + . ID=g13730.t1.utr5p1;Parent=g13730.t1 NODE_1979_length_8230_cov_40.8315 . exon 4175 5926 . + . ID=g13730.t1.exon1;Parent=g13730.t1 NODE_1979_length_8230_cov_40.8315 . CDS 4394 5926 . + 0 ID=cds.g13730.t1;Parent=g13730.t1 NODE_1979_length_8230_cov_40.8315 . exon 6173 7076 . + . ID=g13730.t1.exon2;Parent=g13730.t1 NODE_1979_length_8230_cov_40.8315 . CDS 6173 6955 . + 0 ID=cds.g13730.t1;Parent=g13730.t1 NODE_1979_length_8230_cov_40.8315 . three_prime_UTR 6956 7076 . + . ID=g13730.t1.utr3p1;Parent=g13730.t1 #PROT g13730.t1 g13730 MATLSVGDCKEDSPVFRHRLAEYDGLVDDLERRLKQLVSHAKKRCEFEEKERHMALELAKSFAHFTDSQLADESDAVLADTMHKFASAFQQLEDHREMLISQTKSSFIEPLESFIREEVKEHRDATRAYERACSEYDNATERFAGCRSNDFQSLLDTSIVLGDSKRNYHRTSCDYVIRTNHFHSRKKFLLAERVMDYTTSQLSFFRLGNSIFTEVEGRMGDLFENITFQRKSLEEHTKTEKEQGRDSLAEVEEMKSKMQLHFQARAVQMPVIKANQPPPQVPAPDADGVVKKGHLFVGTKSPFGMSWLRYYHTLTVDGRLSMQRRFKGQVHTEWVPLRISTVKIGAEVDRNFVFQIISPSRTLLLQADSQEEVDVWVISLQQAIATALNTHTDENMHKASSSTAPPHGKHGYLHRKVTPKVESAPGAVVHDAADDGSGNQVPLPADGVDAGGSGNAAPTVPPLELVRGSAAGNRNCADCGSDADWASINIGCTLCLECSGVHRSLGVHISQVRSLTLDRWRPEWIQQMQSHGNVLVNETYERSLADGAKPNAQSDRKTRETFIRQKYVDLAFMSDEDREKIVLERQRVQAEAQEAANKAAEKAAADAAAAKAHMEAARAAEAEAAAQRAAEGGLPHVPSPSAQAMSSWFSFGEGMRARNASRNGEDPPSGDGQPTNGTLASTSMSTSSGMGGAASGHGFHAGQPGDGTGRTGIFSRVTKSIGNTYRSVVDFAKNEGMEGSGSQQLLVDVPAPPPPVVSSSDSSLLHFGRRK* # PASA_UPDATE: g13731.t1, single gene model update, valid-1, status:[pasa:asmbl_3153,status:3], valid-1 NODE_1979_length_8230_cov_40.8315 . gene 7130 8010 . - . ID=g13731;Name=g13731.t1 NODE_1979_length_8230_cov_40.8315 . mRNA 7130 8010 . - . ID=g13731.t1;Parent=g13731;Name=g13731.t1 NODE_1979_length_8230_cov_40.8315 . five_prime_UTR 7955 8010 . - . ID=g13731.t1.utr5p1;Parent=g13731.t1 NODE_1979_length_8230_cov_40.8315 . exon 7600 8010 . - . ID=g13731.t1.exon1;Parent=g13731.t1 NODE_1979_length_8230_cov_40.8315 . CDS 7600 7954 . - 0 ID=cds.g13731.t1;Parent=g13731.t1 NODE_1979_length_8230_cov_40.8315 . exon 7130 7499 . - . ID=g13731.t1.exon2;Parent=g13731.t1 NODE_1979_length_8230_cov_40.8315 . CDS 7279 7499 . - 2 ID=cds.g13731.t1;Parent=g13731.t1 NODE_1979_length_8230_cov_40.8315 . three_prime_UTR 7130 7278 . - . ID=g13731.t1.utr3p1;Parent=g13731.t1 #PROT g13731.t1 g13731 MKSAFAAALCAVLFAGAMAYPFPQIDTVADLQVAQYLGRWYQVYASPAIVNTFEKDAVCITADYSTRDDGKVGVFNANRVNTVDGEVKNITGYAYIPDASQPGQLKVRLQGGAPFDAPYWVAALGPVVNGQYVYSIVTDPYTVGLFVLVRDVAAFQATYAKEIEEKLSTLGFTHFWNKPIPTTQEGCTYPW* # ORIGINAL: g11183.t1 original gene structure, not modified by PASA NODE_1516_length_10787_cov_41.4127 AUGUSTUS gene 240 1624 . - . ID=g11183;Name=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS mRNA 240 1624 . - . ID=g11183.t1;Parent=g11183;Name=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS exon 1082 1624 . - . ID=g11183.t1.exon1;Parent=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS CDS 1082 1624 . - 0 ID=cds.g11183.t1;Parent=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS exon 735 796 . - . ID=g11183.t1.exon2;Parent=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS CDS 735 796 . - 0 ID=cds.g11183.t1;Parent=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS exon 240 482 . - . ID=g11183.t1.exon3;Parent=g11183.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS CDS 240 482 . - 1 ID=cds.g11183.t1;Parent=g11183.t1 #PROT g11183.t1 g11183 MADSTDRPVGVSVHVGEAGIELTHITAVVNAETALSASNIIGDSLSSQSSPDKALPSEITSGVGYDATQHAPSSLIDKGKGRAVSVIPSADDDFAITSTVAIDAKQSESYAGGSASTTVPPLEDDSVPPMMAQPPIIPKGVHRVRVQARNLTDRRPSVSAFQEVTHFTLTQLRDMHAKFSEFAEDGEISYTNFTKMFKLDTKGNAERSFAKRLFVAFDSKRTGKVDLSEFLVALSALSTGATEEEKVSFAFNVYRNDNGYITKEDLCHILAACSNDNKLEAL # PASA_UPDATE: g11184.t1, single gene model update, valid-1, status:[pasa:asmbl_1833,status:3], valid-1 NODE_1516_length_10787_cov_41.4127 . gene 3526 5442 . + . ID=g11184;Name=g11184.t1 NODE_1516_length_10787_cov_41.4127 . mRNA 3526 5442 . + . ID=g11184.t1;Parent=g11184;Name=g11184.t1 NODE_1516_length_10787_cov_41.4127 . five_prime_UTR 3526 3708 . + . ID=g11184.t1.utr5p1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . exon 3526 3860 . + . ID=g11184.t1.exon1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . CDS 3709 3860 . + 0 ID=cds.g11184.t1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . exon 3980 4031 . + . ID=g11184.t1.exon2;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . CDS 3980 4031 . + 1 ID=cds.g11184.t1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . exon 4138 4477 . + . ID=g11184.t1.exon3;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . CDS 4138 4477 . + 0 ID=cds.g11184.t1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . exon 4657 4866 . + . ID=g11184.t1.exon4;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . CDS 4657 4866 . + 2 ID=cds.g11184.t1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . exon 5001 5442 . + . ID=g11184.t1.exon5;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . CDS 5001 5218 . + 2 ID=cds.g11184.t1;Parent=g11184.t1 NODE_1516_length_10787_cov_41.4127 . three_prime_UTR 5219 5442 . + . ID=g11184.t1.utr3p1;Parent=g11184.t1 #PROT g11184.t1 g11184 MSRLFSCAVLAACAVGLALFAQTADADVYPDMSYCASQDYKYGGSYWIYNWCRFPNNPRDSRWAAWSPIYFTGLTHTQNLGDRALYNGYWSGTHSDTLRMEALQLDWAAAPQWNGIINDMSIQVTCHVQNIGDVTVGAGQLCGTRGQGLRLEGVQIRLLGKHARKFWIETVCKDQQNSLMSRRNLYEGETAIERDHFCGSRGRGVALAAVKVFIYPVTLPWQPLYTPGMVADARILDANTFSWTYYRDVNADLLNAFGPTNTAAYNNHFLTNGIYEKRASHPTFNIGTYLAKNPSINTEFAGDVVSSTLHYIYTGRAAGLAAI* # PASA_UPDATE: g11186.t1, single gene model update, valid-1, status:[pasa:asmbl_1834,status:3], valid-1 NODE_1516_length_10787_cov_41.4127 . gene 8927 10787 . + . ID=g11186;Name=g11186.t1 NODE_1516_length_10787_cov_41.4127 . mRNA 8927 10787 . + . ID=g11186.t1;Parent=g11186;Name=g11186.t1 NODE_1516_length_10787_cov_41.4127 . five_prime_UTR 8927 9060 . + . ID=g11186.t1.utr5p1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . exon 8927 9090 . + . ID=g11186.t1.exon1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . CDS 9061 9090 . + 0 ID=cds.g11186.t1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . exon 9340 9629 . + . ID=g11186.t1.exon2;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . CDS 9340 9629 . + 0 ID=cds.g11186.t1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . exon 10110 10281 . + . ID=g11186.t1.exon3;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . CDS 10110 10281 . + 1 ID=cds.g11186.t1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . exon 10602 10787 . + . ID=g11186.t1.exon4;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . CDS 10602 10628 . + 0 ID=cds.g11186.t1;Parent=g11186.t1 NODE_1516_length_10787_cov_41.4127 . three_prime_UTR 10629 10787 . + . ID=g11186.t1.utr3p1;Parent=g11186.t1 #PROT g11186.t1 g11186 MSWFPQERKKVPHAPQYEPPQASRMLSCASVTKERPAVQMTLDRNRRRSAADEVVALIITTVHSANIVPVGDARTLNAYVVIETSSSKRRAVSKNNDALLWEDILKVELSAEDSHIYLRVYANGDDSTPIAVAEVLVESIASPVRRNVPVTGQSGCITATFVHIGADGLIPC* # ORIGINAL: g11185.t1 original gene structure, not modified by PASA NODE_1516_length_10787_cov_41.4127 AUGUSTUS gene 5847 7330 . - . ID=g11185;Name=g11185.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS mRNA 5847 7330 . - . ID=g11185.t1;Parent=g11185;Name=g11185.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS exon 7298 7330 . - . ID=g11185.t1.exon1;Parent=g11185.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS CDS 7298 7330 . - 0 ID=cds.g11185.t1;Parent=g11185.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS exon 5847 7181 . - . ID=g11185.t1.exon2;Parent=g11185.t1 NODE_1516_length_10787_cov_41.4127 AUGUSTUS CDS 5847 7181 . - 0 ID=cds.g11185.t1;Parent=g11185.t1 #PROT g11185.t1 g11185 MKTLAAIALLAMLALVAADTPACDDCPTDFRPVCGRIGGENGTQVTFDNECHARCNTSDVLHNGTCEGFPVERNCFCPLELRPVCAIRFLRQGGAKRETMTNACVAKCEHAEILHDGDCPPLPKFPTRPCIASNEYRPVCALVTRVNLTRDFANAEAARCANAHILHPGRCNNTNSTAPDAAPLGPDGQPITHENNDLPDGFKQYWPNQDDDTLFPVGSGGESDDCTSEGPQQSPQGSRSDVGPRPSGSPNGLPPHPSAGSPSGLPPPHSSGVPPRDQQVQQQQSGMFPGQNDSPFAAFPTAPQQAGQSGQQGGRRCGVNGASANPAQTNGGANGQVAGAGGQMGGVGAGPAYDQSNPGVGSGLGAGSPRGNRDDHALLVAAVALCCVSIAMSAAVLISLGRITRSMGMMTHAPLSIRAGSTVDVLPAYASGKVSPSGKRAIDDAFEREPTLNVV* # ORIGINAL: g8648.t1 original gene structure, not modified by PASA NODE_3537_length_3247_cov_36.5668 AUGUSTUS gene 54 3010 . - . ID=g8648;Name=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS mRNA 54 3010 . - . ID=g8648.t1;Parent=g8648;Name=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 2857 3010 . - . ID=g8648.t1.exon1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 2857 3010 . - 0 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 2574 2659 . - . ID=g8648.t1.exon2;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 2574 2659 . - 2 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 2250 2386 . - . ID=g8648.t1.exon3;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 2250 2386 . - 0 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 1737 1822 . - . ID=g8648.t1.exon4;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 1737 1822 . - 1 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 1186 1338 . - . ID=g8648.t1.exon5;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 1186 1338 . - 2 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 604 824 . - . ID=g8648.t1.exon6;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 604 824 . - 2 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 325 449 . - . ID=g8648.t1.exon7;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 325 449 . - 0 ID=cds.g8648.t1;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS exon 54 127 . - . ID=g8648.t1.exon8;Parent=g8648.t1 NODE_3537_length_3247_cov_36.5668 AUGUSTUS CDS 54 127 . - 1 ID=cds.g8648.t1;Parent=g8648.t1 #PROT g8648.t1 g8648 MVALSRPTQDAAGIITSHRGRLYQSKGNGYVRDVFNNSTLLNLMGRMGIAHVRYPTAGGACASEAQPFYVNAPYGIALAHNGNLTNTGELEEYLDKVAHRHINTNSDSEVLLNIFANELQIIDKFRIDYEDIFIAMERLMRRVRGGYATVAMVNGYGIVAFRDPNGIRPLVYGSRKTDHGIDHIVASESVVLDVLGFTNATAIEAGEVMVIRTDGTIHKRRCAPEAIFSPCIFEYVYFARPDSVIDGVSVYKSRLAMGELLADKILRVFPENDIDVVVPVPDTSRVAALQASYRLNKLFREGFIKNRYVGRTFIMPGQQMRKQNVRRKLNPMPMEFAGKNVLLVD # PASA_UPDATE: g12914.t1, single gene model update, valid-1, status:[pasa:asmbl_8155,status:12], valid-1 NODE_555_length_21321_cov_41.2621 . gene 15511 20658 . + . ID=g12914;Name=g12914.t1 NODE_555_length_21321_cov_41.2621 . mRNA 15511 20658 . + . ID=g12914.t1;Parent=g12914;Name=g12914.t1 NODE_555_length_21321_cov_41.2621 . exon 15511 20345 . + . ID=g12914.t1.exon1;Parent=g12914.t1 NODE_555_length_21321_cov_41.2621 . CDS 15511 20345 . + 0 ID=cds.g12914.t1;Parent=g12914.t1 NODE_555_length_21321_cov_41.2621 . exon 20525 20658 . + . ID=g12914.t1.exon2;Parent=g12914.t1 NODE_555_length_21321_cov_41.2621 . CDS 20525 20564 . + 1 ID=cds.g12914.t1;Parent=g12914.t1 NODE_555_length_21321_cov_41.2621 . three_prime_UTR 20565 20658 . + . ID=g12914.t1.utr3p1;Parent=g12914.t1 #PROT g12914.t1 g12914 MATAAEKAAARNAAARKKALESHGLPAADDIIMSAAPGRWQSRNKGNNSRRGSILPGGQDNAAVTQRMQQLLQNGQGVALLSSIPAADGSVAGRLRRASLASQNFEETKSRVASILSGLVQEYGISDEEDETLSAQAAAGAPSTTAEGDGKGLLEQVPPVEHVDKAAQQMEEVMKIRTNVDGLLREHVRNVTSRDALMDNLKEWFEKFGDGSADTVAEVEFDNELYELYNSLLEDPIDAEKIFDMINVLYKGAEILNRRQPEMGRVITQQQLELKKIIAGKQTELEFLRSALDDRRSWADRLEKELGSTKGKFSAAEMKLSKMGRLMAKKNDELAQMRRIHLKEMNIVREQLFKLQQAIKQGASETLYRMSTVPMSKIMSLGEGLDDPIGLMPEGESVEESLSKVELEAELVSLRDQMAAREQTELAHRRELDAKHKKQVEEIVITNAETIRRLRQQMDTMAAQHREDMCNLVQKMSSGGEMDASLDESLRAVNVKVALAHEAGDAKLDAISNAMRDAMSKEVGEDLESYLEQKERKASASERGEGNDGVTTEGGVGVSEGGDPFGESLDATLAAKDKELEGALLEKSAELGFGEVDEDEPVTPEEAEARKKKAMLHSVHMAVVNVALGDFASRARTLRDELMASLEELKKRRSADERRIEELSKEVVRLEGKSRETAREDLRPILEFAAQRLSAFRGELTTARNEIGDGDIRNIGTEDLSGALDHMIKALDVVRELIYAIPSDERMYEDDALLAQIDGVGGDAEQLRSQIDAQEASGPPIERKGRKRKAQQPKGKKGAPRRHNTNSSMGSSRAGSSHSISANVDNEEEPRPGQRNGATTPQRSVADLRLSRGDLMSSRAGSVSSIGSGDDLDDRDTRDAREDSSDELINGVDAGDTNPSGERDGDAPDERNGGSERDGGDSAQRRASSDKLTGEKGGRGPGPKKRATFSEDVVIDESAKEATPRATPSSSKSPSAASSAPSSAKKQREKPEQQQQQQLQQQQQQQQQQQQQQQQQQHREKPTSASSSLGRSSRANIADDGDGDEDDAPAKRTTVRKRTSMAEPRENHAAERKERVAAEKAAEKAALERASEAKQAAAAAHRDARQREAKQRGAAAAAAAAAPSTSSSSAMVDRDAEAQESLHSQPQNAAEYRQRKAPAAPLPEQRSPQPLAQQSLPIGSSAFGEDLVSILRSTTGRTNSPLGANKQRSSALESAFRSVPEASAASPEELVSIYREKLKFIALQLGKGGSSKRTSELAKRMETILSRIARVTQEQQHEFEAAAEADSAPPSRAPSRHAQPNVVFHQNQPSHAHGGVALGSASSASIGTNSAAAAQILASIALEAQRIGSRTPHMYADENNASGDDDDDDADYADRGRESGARSRGGAASSSSRYDPSLTLLRRRRAAGQAAESNSSRQPLSTSALSFLSRQEVLKRAISSKWLDRREQIVRERLARMEMVANPPMGGSSQLPLRIAAQKLCHLCSTVGPVVPHSHSPAPLAPIGTHYDRAATVLGTYHTSPPSSPRAAATSPRGGASLAMDDGSGLPSSSMRNSSGSNERLPIRPRTAHGMTTLDRERMMHKHFDADQSGGDGGSGDGAKDTQLTPGEPLPSLIVLPIAEKLAD* # PASA_UPDATE: g12913.t1, single gene model update, valid-1, status:[pasa:asmbl_8154,status:3], valid-1 NODE_555_length_21321_cov_41.2621 . gene 10457 14644 . + . ID=g12913;Name=g12913.t1 NODE_555_length_21321_cov_41.2621 . mRNA 10457 14644 . + . ID=g12913.t1;Parent=g12913;Name=g12913.t1 NODE_555_length_21321_cov_41.2621 . five_prime_UTR 10457 10579 . + . ID=g12913.t1.utr5p1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 10457 10783 . + . ID=g12913.t1.exon1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 10580 10783 . + 0 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 11071 11379 . + . ID=g12913.t1.exon2;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 11071 11379 . + 0 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 11580 11867 . + . ID=g12913.t1.exon3;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 11580 11867 . + 0 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 12134 12224 . + . ID=g12913.t1.exon4;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 12134 12224 . + 0 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 12490 12553 . + . ID=g12913.t1.exon5;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 12490 12553 . + 2 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . exon 12708 14644 . + . ID=g12913.t1.exon6;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . CDS 12708 14352 . + 1 ID=cds.g12913.t1;Parent=g12913.t1 NODE_555_length_21321_cov_41.2621 . three_prime_UTR 14353 14644 . + . ID=g12913.t1.utr3p1;Parent=g12913.t1 #PROT g12913.t1 g12913 MATPAMAAWGDSGLLENKAGGDTLSIHERAFFENCFRELDPAGTNGIAPGAAATYFRTSALSDAMLAQIWTLAVGGKPSVDKQSFFVALKLIALAQNGKEVALSNLSAQTPMPQFKGSLASSSGPTISASAVIAPSAGEWLIKPQEKDGYDKFFIASGAVNGYLAGDKAKGVLMNSKLPFDILKTIWELSDIDKDGQLDADEFAVAMHLTHAARAGRNPPPALPASLLPPSKRRSSTPSSLPSSARSSAASISGIAALPVAAAPAVKSTAWVVTDAEKQGFDAFFREADKDKDGWLSGNDAREIFLKSGLPGNILAHIWSLADVERAGRLNAESFALAMYLITGKLNRGQDPPAALTPEMIPPYFRSNPAAASLVGGVTRASLDGGIAPASSGAPAISPLVSQSAATAAVKRPSTQTLIADILRDKPPAPSSEVGGGDFSAIKELDDVSKEIDTISKDKEVAEKETADLEQQVAQVKLETADMKAKVELATTELTALQTKKLDAQRRLTEVEQEKASFDKQLTAVREQFDAETAEINSLKARIEQQQQSMRQQEDSVRRTNAELEALREEESKLRADLDKGRRDLEALHKQQQHAHAEMEAVRQKIEQVAEARQQLEQQSTPAAITAVAKASISSLDDVFAPSSGMATPPRFSTASVLTDPFSKSDPFLDDPFVSSRNGDDVFKAADPFKAPAEDPFKANDPFKAANSDPFKANDDPFHTADPFKGNDDPFKAASDDPFAASPAVGAKSSDPFGSGGDDPFKSADPFAGGGSAAAAFGSDPFGGAPAVGRADSVRSAGSGSFKSTPAADPFAEDPFNSKPATSSTAHAASAAPASVFSSDPFKSDDPFGAKGGFASDFEASFPETI* # ORIGINAL: g12911.t1 original gene structure, not modified by PASA NODE_555_length_21321_cov_41.2621 AUGUSTUS gene 2756 6302 . - . ID=g12911;Name=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS mRNA 2756 6302 . - . ID=g12911.t1;Parent=g12911;Name=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 6290 6302 . - . ID=g12911.t1.exon1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 6290 6302 . - 0 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 5079 6145 . - . ID=g12911.t1.exon2;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 5079 6145 . - 2 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 4809 4839 . - . ID=g12911.t1.exon3;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 4809 4839 . - 0 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 4474 4587 . - . ID=g12911.t1.exon4;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 4474 4587 . - 2 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 3388 4240 . - . ID=g12911.t1.exon5;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 3388 4240 . - 2 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 3125 3257 . - . ID=g12911.t1.exon6;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 3125 3257 . - 1 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 2940 3002 . - . ID=g12911.t1.exon7;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 2940 3002 . - 0 ID=cds.g12911.t1;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS exon 2756 2782 . - . ID=g12911.t1.exon8;Parent=g12911.t1 NODE_555_length_21321_cov_41.2621 AUGUSTUS CDS 2756 2782 . - 0 ID=cds.g12911.t1;Parent=g12911.t1 #PROT g12911.t1 g12911 MADPEEFEADYEDDLLGKILEEDDEYVDELAESVGAIVTPVKKPAPTGVDAKTRASTDPKKSNATANVKSEPRNTTHSKANGDRQEKDRPRDAATAREKPKEGSSSGDKDKDVSKPRDSAKEVGATLREKPKDSASKAKETAKAVEPAPKSKDASAPREKPKDSSVKPKETTAKATESAPKLKEASTPREKPKEVASGQSKPREALSARDQPKEVVIKAESAFSEDDRLKEKARERERIQRAREELDRERERLLEQEKALARELREEEEKKKEREKDREREREREREKERERERERKERQQADLLSIQRQRSVPVPSQAVKRVHDAPRTDQRNEHRPSETPARSSVLSDLKSLSTASDSPNLTNAAALIDNEERYVPNYTARVAAALRPPPSREDEPSKRADPQALINTSERYIPLYSGGDSRRKRSRSPPSRIVIDRDNALRQKSTDRPSSPRLDAGAAAERRLSSNTSRDSEERARREAEEKERLKRDSEDRARRERERREVEEKEKREREKKEAAENERREKEKREAEEKERRDKERRENEDRERREKERREAEERERRERERREAEQQQRRDREERERWDKERERREPERRREFDGQRDGQRDRMSIGRDSRAPLEDNGTVQYDRGGREIGYRPPRDPALDRDGPRDRERRLSTRDEPYRQEIVGPDSYRPAPDAWSGARRSPFDDAAGYGRRREDPNDSSATKRRRVETDGRDGDSTGADGHRPFLYGPGVQSSFPMPGIHPPQSQVQNMYMRLLQVILLS* # PASA_UPDATE: g12912.t1, single gene model update, valid-1, status:[pasa:asmbl_8153,status:3], valid-1 NODE_555_length_21321_cov_41.2621 . gene 6774 10112 . + . ID=g12912;Name=g12912.t1 NODE_555_length_21321_cov_41.2621 . mRNA 6774 10112 . + . ID=g12912.t1;Parent=g12912;Name=g12912.t1 NODE_555_length_21321_cov_41.2621 . five_prime_UTR 6774 6901 . + . ID=g12912.t1.utr5p1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 6774 7122 . + . ID=g12912.t1.exon1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 6902 7122 . + 0 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 7253 7410 . + . ID=g12912.t1.exon2;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 7253 7410 . + 1 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 7520 7684 . + . ID=g12912.t1.exon3;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 7520 7684 . + 2 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 7877 8086 . + . ID=g12912.t1.exon4;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 7877 8086 . + 2 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 8324 8514 . + . ID=g12912.t1.exon5;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 8324 8514 . + 2 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 8707 8811 . + . ID=g12912.t1.exon6;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 8707 8811 . + 0 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 9075 9154 . + . ID=g12912.t1.exon7;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 9075 9154 . + 0 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 9366 9434 . + . ID=g12912.t1.exon8;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 9366 9434 . + 1 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 9550 9639 . + . ID=g12912.t1.exon9;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 9550 9639 . + 1 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . exon 9848 10112 . + . ID=g12912.t1.exon10;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . CDS 9848 10016 . + 1 ID=cds.g12912.t1;Parent=g12912.t1 NODE_555_length_21321_cov_41.2621 . three_prime_UTR 10017 10112 . + . ID=g12912.t1.utr3p1;Parent=g12912.t1 #PROT g12912.t1 g12912 MTIGSGSETSSLIGGNSGISKGPSGVGERVRSVINADMDSDAIDTSSVEDPGSDFESTPLLESPPRTQSSIVTIFSIWNTMIGTSLLTMPWAIQQAGFALGLICVLLMGLLCLYTCTLVVKHGSKLATKRDVEFPDICRHHLGDRVYYVAVGFSMLTLIGAMIVYWVLMSNFLFKTVDYIHGSHTEPMSNVSVTNMSFIALHDSGNATSSEASSHWTDYWNLNYSALYLVIIVFPLVNFKSLSFFTKFNALGVASIFYIIALVSYNAAKDGVHLDSTVKQAGVDFFSLTGVLSLSFFIHTGCLSIMRNQAKPANNTRDLTIAYVLVGMTYLIVGIIYFISYPKDKSLIESNLLDNFGDRDVMAVVARVFLLFQMITVYPLLMYIVRSQFMSVLFGNEYPNVWYVLLHNSIITAICVLFGVFYRKVGDIIRFTGAFCGLIYVFALPCAVHLIILHRKGRMTRMQLVVHGAIVLLGFINLVGQFAIL* # ORIGINAL: g2829.t1 original gene structure, not modified by PASA NODE_7170_length_464_cov_25.4961_potentialcontaminant AUGUSTUS gene 1 87 . - . ID=g2829;Name=g2829.t1 NODE_7170_length_464_cov_25.4961_potentialcontaminant AUGUSTUS mRNA 1 87 . - . ID=g2829.t1;Parent=g2829;Name=g2829.t1 NODE_7170_length_464_cov_25.4961_potentialcontaminant AUGUSTUS exon 1 87 . - . ID=g2829.t1.exon1;Parent=g2829.t1 NODE_7170_length_464_cov_25.4961_potentialcontaminant AUGUSTUS CDS 1 87 . - 0 ID=cds.g2829.t1;Parent=g2829.t1 #PROT g2829.t1 g2829 MCGLTGKAVPKFGYQGWLLLFYTTSTIYG # PASA_UPDATE: g9068.t1, single gene model update, valid-1, status:[pasa:asmbl_8108,status:12], valid-1 NODE_548_length_21429_cov_43.2846 . gene 6161 8064 . - . ID=g9068;Name=g9068.t1 NODE_548_length_21429_cov_43.2846 . mRNA 6161 8064 . - . ID=g9068.t1;Parent=g9068;Name=g9068.t1 NODE_548_length_21429_cov_43.2846 . five_prime_UTR 8040 8064 . - . ID=g9068.t1.utr5p1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . exon 7807 8064 . - . ID=g9068.t1.exon1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . CDS 7807 8039 . - 0 ID=cds.g9068.t1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . exon 7534 7648 . - . ID=g9068.t1.exon2;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . CDS 7534 7648 . - 1 ID=cds.g9068.t1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . exon 6715 7316 . - . ID=g9068.t1.exon3;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . CDS 6715 7316 . - 0 ID=cds.g9068.t1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . exon 6161 6540 . - . ID=g9068.t1.exon4;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . CDS 6267 6540 . - 1 ID=cds.g9068.t1;Parent=g9068.t1 NODE_548_length_21429_cov_43.2846 . three_prime_UTR 6161 6266 . - . ID=g9068.t1.utr3p1;Parent=g9068.t1 #PROT g9068.t1 g9068 MREALTSGSPACFTEIHEVSCPDSIDSLPEKMAAVANSTRPLRVGVYSWNVGTYTLRSGDDIAEWLRLGNTTDVLAVGFQEADVSGPAFVLNSTSKKAKWMEAVRRTVKEWGTHAEIASDSIVGIAIIAFARTTVLDQISNVDTTIVGCGFLNHLGNKGSAVVRLTLGTGTHLCLVNSHLAPHIAKKYVARRGRDYATINERVAFQSTKIANPKGGKTEWRPSRTPSSILAHDVVLWFGDLNYRVDLDDDVTRAIAAAPEKWKTAIDESDQLKIEMRAKRVFADYRESDITFAPTYKFDVGTNRYDTNVKKRRAPAWTDRVLYVGSSVSVVEYASSPSLVSSDHKPIRSVMEMPFTPLSPAAVAEMKAVLGPDHFRCARRAGLLSPFGRELLVLIVLIAIGVRYFLL* # PASA_UPDATE: g9066.t1, single gene model update, valid-1, status:[pasa:asmbl_8107,status:12], valid-1 NODE_548_length_21429_cov_43.2846 . gene 1245 3127 . - . ID=g9066;Name=g9066.t1 NODE_548_length_21429_cov_43.2846 . mRNA 1245 3127 . - . ID=g9066.t1;Parent=g9066;Name=g9066.t1 NODE_548_length_21429_cov_43.2846 . five_prime_UTR 3083 3127 . - . ID=g9066.t1.utr5p1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . five_prime_UTR 2909 2934 . - . ID=g9066.t1.utr5p2;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . exon 3083 3127 . - . ID=g9066.t1.exon1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . exon 2906 2934 . - . ID=g9066.t1.exon2;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . CDS 2906 2908 . - 0 ID=cds.g9066.t1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . exon 2564 2667 . - . ID=g9066.t1.exon3;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . CDS 2564 2667 . - 0 ID=cds.g9066.t1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . exon 1857 1940 . - . ID=g9066.t1.exon4;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . CDS 1857 1940 . - 1 ID=cds.g9066.t1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . exon 1245 1531 . - . ID=g9066.t1.exon5;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . CDS 1444 1531 . - 1 ID=cds.g9066.t1;Parent=g9066.t1 NODE_548_length_21429_cov_43.2846 . three_prime_UTR 1245 1443 . - . ID=g9066.t1.utr3p1;Parent=g9066.t1 #PROT g9066.t1 g9066 MPTPIKAPSSASTRASAAAGGASPRTPSAGPVRKPSRTSSAASSRRAGGGATRFYSDDAPGLKVGPVPILVMSLVFIASVFVLHIWGRYTRA* # PASA_UPDATE: g9067.t1, single gene model update, valid-1, status:[pasa:asmbl_8106,status:3], valid-1 NODE_548_length_21429_cov_43.2846 . gene 3418 6141 . + . ID=g9067;Name=g9067.t1 NODE_548_length_21429_cov_43.2846 . mRNA 3418 6141 . + . ID=g9067.t1;Parent=g9067;Name=g9067.t1 NODE_548_length_21429_cov_43.2846 . five_prime_UTR 3418 3610 . + . ID=g9067.t1.utr5p1;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . exon 3418 3829 . + . ID=g9067.t1.exon1;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . CDS 3611 3829 . + 0 ID=cds.g9067.t1;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . exon 4251 4726 . + . ID=g9067.t1.exon2;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . CDS 4251 4726 . + 0 ID=cds.g9067.t1;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . exon 5010 6141 . + . ID=g9067.t1.exon3;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . CDS 5010 5700 . + 1 ID=cds.g9067.t1;Parent=g9067.t1 NODE_548_length_21429_cov_43.2846 . three_prime_UTR 5701 6141 . + . ID=g9067.t1.utr3p1;Parent=g9067.t1 #PROT g9067.t1 g9067 MLPTHIRVFALIALTALAGLACADEIKKEVVTLNSDNFQASIASREFAMVNFYADWCRFSQMLAPVFDQAASLLSSDKVMLARVNCEDQAALAQANHITKYPTIKIYRKGQASKREYRGERTVKALDDFIKTQLESGLQIAPTAVDVSNFLDRYRRIVVGFFAEEKEVSNLAIHFDEVADELRDDCQFVRVVTEKTALAAGAPKVPSVVFRETDQSDIVYDGPESKDELKKWASELCHPLVREITFENAEALTEEGLPFLILFHLPDEKKSVTDFTNVIKARFTQLKGTMNFITADAIKFMHPLQHMGKSKADLPVLAIDSFQHMYDFGPFQEVHVDGRLEQFIADFNSGLLHHRFHNGGGGPQQIAAAPPAPQADSNNNNNNNNGGDNNGAGAPAVAAPVAGGDAAPAADAPKEGEAKRNVDGGDAQNAPPNPSPVIPESTFKKLQPSKSRYTMRKKDEL* # PASA_UPDATE: g9065.t1, single gene model update, valid-1, status:[pasa:asmbl_8105,status:12], valid-1 NODE_548_length_21429_cov_43.2846 . gene 199 896 . + . ID=g9065;Name=g9065.t1 NODE_548_length_21429_cov_43.2846 . mRNA 199 896 . + . ID=g9065.t1;Parent=g9065;Name=g9065.t1 NODE_548_length_21429_cov_43.2846 . exon 199 381 . + . ID=g9065.t1.exon1;Parent=g9065.t1 NODE_548_length_21429_cov_43.2846 . CDS 199 381 . + 0 ID=cds.g9065.t1;Parent=g9065.t1;5_prime_partial=true NODE_548_length_21429_cov_43.2846 . exon 504 896 . + . ID=g9065.t1.exon2;Parent=g9065.t1 NODE_548_length_21429_cov_43.2846 . CDS 504 611 . + 0 ID=cds.g9065.t1;Parent=g9065.t1 NODE_548_length_21429_cov_43.2846 . three_prime_UTR 612 896 . + . ID=g9065.t1.utr3p1;Parent=g9065.t1 #PROT g9065.t1 g9065 LKMEDYLHAILRDEVIQAHWTQQTILKRTVHLENETLAARVVESATAVVKRLQSAASPREEGEDSTPLTRRVTELISLSTNRDVLASMDPTWRPWL* # ORIGINAL: g9070.t1 original gene structure, not modified by PASA NODE_548_length_21429_cov_43.2846 AUGUSTUS gene 17311 21243 . + . ID=g9070;Name=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS mRNA 17311 21243 . + . ID=g9070.t1;Parent=g9070;Name=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 17311 17399 . + . ID=g9070.t1.exon1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 17311 17399 . + 0 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 17527 17598 . + . ID=g9070.t1.exon2;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 17527 17598 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 17761 17832 . + . ID=g9070.t1.exon3;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 17761 17832 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 18212 18283 . + . ID=g9070.t1.exon4;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 18212 18283 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 18438 18509 . + . ID=g9070.t1.exon5;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 18438 18509 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 18666 18737 . + . ID=g9070.t1.exon6;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 18666 18737 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 18875 18946 . + . ID=g9070.t1.exon7;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 18875 18946 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 19486 20407 . + . ID=g9070.t1.exon8;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 19486 20407 . + 1 ID=cds.g9070.t1;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS exon 20557 21243 . + . ID=g9070.t1.exon9;Parent=g9070.t1 NODE_548_length_21429_cov_43.2846 AUGUSTUS CDS 20557 21243 . + 0 ID=cds.g9070.t1;Parent=g9070.t1 #PROT g9070.t1 g9070 MDVTGSSLGLNRIATLPSGIFNNLTALTGLLLSSNQIATLPSGIFDNLSALTGLDLHSNQIATLSSGIFNKLTVLTRLDLQMNQIATLPSGMFDKLTALTRLYLDSNQIATLPIGIFNNLTALTQLYLDSNKIATLPSGIFDNLTKLTTLFLNSNQIVTLPSGIFDKLTALTTLTCDCKKGMTNCNRFTGACICTVAGWTGVNCDTPCESNRYGINCAENCTCKNGAFCDRFTGECSCTAGWTGTNCDVACAGDRFGANCNNTCACKNGATCDRFTGCMCTAGWTGTNCDVACAGDRFGANCTSTCECENGATQCDRFTGECACTAGWTGPTCATVCPSGKYGPNCTLTCECGNGICNRFNGNCTCTALRGIGGSNCNITCDRLPGPEKRYGLGCSTLCDCTNGAACDASTGACTCAFGWTGVFCNLLVAPSMPNVSIAAESSPYGVGIRLTWTHEDAGARAWPNWRYEISRSGCISKVFPVGDTLTFLDTNVTINLDYTYFVTAYNNKSVASPAGLAGIKNLHKTDPPSPPLDVSSTPTLNPDNQQPVIKFTWKADTSSGDITRTLIFRDGVVIADGAMATEYNDRNVQLGRTYFYGIISINRYGNSPAKNFSETASLGPTDVSSSNPTSGASSSSGAIAGGVVGAVVGTAAVVCGILFVRKRSSLKKMAALVRSELELIDTVVRRPEIAEFEITGSCILLFCRIGGE* # PASA_UPDATE: g9069.t1, single gene model update, valid-1, status:[pasa:asmbl_8109,status:12], valid-1 NODE_548_length_21429_cov_43.2846 . gene 8190 13109 . - . ID=g9069;Name=g9069.t1 NODE_548_length_21429_cov_43.2846 . mRNA 8190 13109 . - . ID=g9069.t1;Parent=g9069;Name=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 13025 13109 . - . ID=g9069.t1.exon1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 13025 13109 . - 0 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 12516 12558 . - . ID=g9069.t1.exon2;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 12516 12558 . - 2 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 12338 12418 . - . ID=g9069.t1.exon3;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 12338 12418 . - 1 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 11074 12025 . - . ID=g9069.t1.exon4;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 11074 12025 . - 1 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 10563 10808 . - . ID=g9069.t1.exon5;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 10563 10808 . - 0 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 10099 10262 . - . ID=g9069.t1.exon6;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 10099 10262 . - 0 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 9827 9893 . - . ID=g9069.t1.exon7;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 9827 9893 . - 1 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 9441 9579 . - . ID=g9069.t1.exon8;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 9441 9579 . - 0 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 9109 9247 . - . ID=g9069.t1.exon9;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 9109 9247 . - 2 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . exon 8190 8825 . - . ID=g9069.t1.exon10;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . CDS 8330 8825 . - 1 ID=cds.g9069.t1;Parent=g9069.t1 NODE_548_length_21429_cov_43.2846 . three_prime_UTR 8190 8329 . - . ID=g9069.t1.utr3p1;Parent=g9069.t1 #PROT g9069.t1 g9069 MAAAMRFVAVVALLATIGAAVAHRIHLRDAPAEVPNGWSLIERANPAAKLRVSFFLTQSNLDKVDDIFRRVTDPDSTEWRNYLSAAEIRDIVRPSDKHVAAVRDWLAAAGIAADIPATGDVVYATMTVVQAETLLESAPFHVYASEQAKRRAVLTLGPYSLPAEVAEAVSVIGGVSRFPATFSPKRVSSAVDADYSEDTFGLLSQTAGDAQLLVIFRPGCADGSVPTTETNMCANTSAITSFSVKVSGESFDSITKTYSASVVDGTGDGLLTCHTCANWVPTLYASITEGLCANQSRWDAVGVVCVVTVRPLENYVPLHISSFTTLYANGSSIVSGGLYNAILSPFTTPDLIQELYGVPRGTRGASPQNSQAAEEFLSQYYTPADLDNFFQVHGVTAQRQPIVIGPNDASNPGGEATLDIEYIMAVAPGVPTWFWSVDGRHHVNDTENPDQEPFLEWLQDLQRRDAIPLVHSVSYSDIESTIDQAYRDQCDNLFQQLAIRGITVLFASGDDGAVGFQARDHPEKCQRSGPAYPNTSPYVTNVGATQLSRVVTPVNARNPKDTGVGTYLNFYAKTPSERVCSSDTAGVITSGGGFSDFAAMPEYQKDAVNAYLADPTVTLPPDTWFSRQNRAYPDVSAIGHKFLCLQSGQIVSVHGTSASTPVFAAIISLLNDKLLAAGQKPLGFLNPLLYKWAKEHPEAFIDVTAGDNRCPVVVKNCCQYGFVAARGWDPVTGLGSPRYDVMLDLLLPSTTGLDASASSSTEKTTKSIAAAGLAFGLIAFILSIVMLVLALRRNNTAGYSSIS* # ORIGINAL: g12696.t1 original gene structure, not modified by PASA NODE_2117_length_7645_cov_42.4332 AUGUSTUS gene 3820 7271 . - . ID=g12696;Name=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS mRNA 3820 7271 . - . ID=g12696.t1;Parent=g12696;Name=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 7215 7271 . - . ID=g12696.t1.exon1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 7215 7271 . - 0 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 6904 6959 . - . ID=g12696.t1.exon2;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 6904 6959 . - 0 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 6484 6627 . - . ID=g12696.t1.exon3;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 6484 6627 . - 1 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 6084 6241 . - . ID=g12696.t1.exon4;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 6084 6241 . - 1 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 5754 5911 . - . ID=g12696.t1.exon5;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 5754 5911 . - 2 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 5380 5514 . - . ID=g12696.t1.exon6;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 5380 5514 . - 0 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 5134 5219 . - . ID=g12696.t1.exon7;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 5134 5219 . - 0 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 4788 4960 . - . ID=g12696.t1.exon8;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 4788 4960 . - 1 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 4372 4536 . - . ID=g12696.t1.exon9;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 4372 4536 . - 2 ID=cds.g12696.t1;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS exon 3820 4133 . - . ID=g12696.t1.exon10;Parent=g12696.t1 NODE_2117_length_7645_cov_42.4332 AUGUSTUS CDS 3820 4133 . - 2 ID=cds.g12696.t1;Parent=g12696.t1 #PROT g12696.t1 g12696 MFDIIVDFPDSEPAVLDLKESLGGVGLQESLFDSVRKALATRLLHPGAETGVIITQYISCIKTLRLLDPTGVAVERVCAPIQAYLRQRSDTVKAIVTGLTGDDGGDLQDELAHPATANHAADDFGDDWLPDPIDADPTASVAAQAHYSRRASDILTTLVGIYGSRELFVSEYRTMLADRLLGTAPVDSDKEIRNMELLKLRFGDASMQSCDVMLKDIADSRRFNALVRERQQSEGQVPLRATVLSRLFWPTHKEEPLELPEDVKRAMEEYSREFESTKAARTLVWRPSLGSVTLEFVLADGTAAEFTVSPTVAAPVLLFREKDEWTADELADRLQIAPALVRRRVSFWVSRGVLREVDGKYAPVEVAGRAFRSHADNGTGDAPAAQSDSDEDDGEEDASRADASGSASAANQPDMTMPWQFTVGMLRNLGALPIDRIHATLKMYLQAVGVVCELHHLRAFLDSKVADGSLECVAGSYSLPK* # PASA_UPDATE: g12695.t1, single gene model update, valid-1, status:[pasa:asmbl_3560,status:12], valid-1 NODE_2117_length_7645_cov_42.4332 . gene 150 3604 . + . ID=g12695;Name=g12695.t1 NODE_2117_length_7645_cov_42.4332 . mRNA 150 3604 . + . ID=g12695.t1;Parent=g12695;Name=g12695.t1 NODE_2117_length_7645_cov_42.4332 . exon 150 266 . + . ID=g12695.t1.exon1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 150 266 . + 0 ID=cds.g12695.t1;Parent=g12695.t1;5_prime_partial=true NODE_2117_length_7645_cov_42.4332 . exon 482 520 . + . ID=g12695.t1.exon2;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 482 520 . + 0 ID=cds.g12695.t1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . exon 654 1809 . + . ID=g12695.t1.exon3;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 654 1809 . + 0 ID=cds.g12695.t1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . exon 2008 2135 . + . ID=g12695.t1.exon4;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 2008 2135 . + 2 ID=cds.g12695.t1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . exon 2313 2699 . + . ID=g12695.t1.exon5;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 2313 2699 . + 0 ID=cds.g12695.t1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . exon 3106 3604 . + . ID=g12695.t1.exon6;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . CDS 3106 3282 . + 0 ID=cds.g12695.t1;Parent=g12695.t1 NODE_2117_length_7645_cov_42.4332 . three_prime_UTR 3283 3604 . + . ID=g12695.t1.utr3p1;Parent=g12695.t1 #PROT g12695.t1 g12695 FLVDNRNAGAPVTYIIDTNYRVNDKTPDYVQYHYLFAKKVLNVPEELEEFNQVTYFQSEKRYFAGTVQAYNVGTDDAAHRVYGIQLYPSDVAKEDVILSMVRAVLPAIGIPGANINFIAAGGQQTCTQVKADLLKLGVRVLSIEDVLASVDFIPLNVGEAWGYLRMFPVSQDDLTPADIAVFDELPLSLSVVAGVITKSFQTELSHINLKSRERNTPNMVLRDVSVQHTSFASLIDRPVHLVVSSDGFTLTPTTEEEVAAKLKAHFDRPWRPTLWLKESRLLSYDEMCGASAQQCLTEGSKKFGSKAANLGFLCHKDVLGRATQPSTMSHKFGYDLTPAGFGVPIQFYADFIDHPANGLARTLISQIISLEESDIVSTSERSQFVEKIQNAIYMNSTIPPSALSAISARLGQVMPGLKKFKVRSSASAEDIPGFDGAGLYDSFTFKNKEVDNPDMSCTVKYENGGVKSKMVPATLNCAIKGVYASLWNKRAIEERSFARLNHSTAAMGLGVLSQYDEESEVAANSVVVTRLNDVPTAGYSLAIQQGNNLVTNPDKGTYAEGSMAIFGDEGEPTTYSVQRYAKPIADRTPLTGPVMNKDQLDKMMDMAVQVERAYCKYVDKNYIGGEYDASSCDYVEEIGEKVTALDMEFKYTENAKFICKQVREFHG* # ORIGINAL: g13513.t1 original gene structure, not modified by PASA NODE_3218_length_3992_cov_35.1307 AUGUSTUS gene 100 1889 . + . ID=g13513;Name=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS mRNA 100 1889 . + . ID=g13513.t1;Parent=g13513;Name=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS exon 100 241 . + . ID=g13513.t1.exon1;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS CDS 100 241 . + 1 ID=cds.g13513.t1;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS exon 578 669 . + . ID=g13513.t1.exon2;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS CDS 578 669 . + 0 ID=cds.g13513.t1;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS exon 870 960 . + . ID=g13513.t1.exon3;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS CDS 870 960 . + 1 ID=cds.g13513.t1;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS exon 1298 1383 . + . ID=g13513.t1.exon4;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS CDS 1298 1383 . + 0 ID=cds.g13513.t1;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS exon 1790 1889 . + . ID=g13513.t1.exon5;Parent=g13513.t1 NODE_3218_length_3992_cov_35.1307 AUGUSTUS CDS 1790 1889 . + 1 ID=cds.g13513.t1;Parent=g13513.t1 #PROT g13513.t1 g13513 TKGYKLAIGEATGKASQHLVRKYGKWWFETVMSLDYKARDPMQCCECSFDFNGTHPFASVEVETIVLFATLLRKAGNKDHPGRNAWVSDDEASECHQCKVQFTMVRRRHHCRYCGNVVCDTCSLSRVVLPGFDYKTPLRVCDLCVARAFVPLVTQLTAGEGVSLDGKVK* # PASA_UPDATE: g7190.t1, single gene model update, valid-1, status:[pasa:asmbl_7604,status:3], valid-1 NODE_477_length_22977_cov_43.3504 . gene 9295 12830 . - . ID=g7190;Name=g7190.t1 NODE_477_length_22977_cov_43.3504 . mRNA 9295 12830 . - . ID=g7190.t1;Parent=g7190;Name=g7190.t1 NODE_477_length_22977_cov_43.3504 . five_prime_UTR 12676 12830 . - . ID=g7190.t1.utr5p1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . exon 11904 12830 . - . ID=g7190.t1.exon1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . CDS 11904 12675 . - 0 ID=cds.g7190.t1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . exon 11141 11738 . - . ID=g7190.t1.exon2;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . CDS 11141 11738 . - 2 ID=cds.g7190.t1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . exon 10631 10772 . - . ID=g7190.t1.exon3;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . CDS 10631 10772 . - 1 ID=cds.g7190.t1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . exon 10120 10307 . - . ID=g7190.t1.exon4;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . CDS 10120 10307 . - 0 ID=cds.g7190.t1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . exon 9295 9896 . - . ID=g7190.t1.exon5;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . CDS 9668 9896 . - 1 ID=cds.g7190.t1;Parent=g7190.t1 NODE_477_length_22977_cov_43.3504 . three_prime_UTR 9295 9667 . - . ID=g7190.t1.utr3p1;Parent=g7190.t1 #PROT g7190.t1 g7190 MEHRIAPKDSSVSQSPSQRSPMAPMMMSPGAVAAATAMAAAAQPYFMRLNAAPDAPNYLLTAGMMDLQLPLSGNALPIQPEEHSTALFLQQQRLLQAMRASPMPTSRPESPNAHSTSAASGGGGGPKPKKCPRVCAPCKKAKTACDVQRPCSRCVRLSQADTCIDVSHKVQARRSSSTPPVGVGIAKEMTAESVASNRSQQQQQQQQQQQSAMDALMSALVPMHAAAQAQAGSNKAKRGDTDDADAAHPMKRIKSEGAATPLTPNPFSLGVPSPFSSASSPDPIDFPWECLFDLQSIPDVPAGPAQQSADASTDANFPNAEVLQSLFAIFGGAMAQGDESGTPGATGASSEKRSGASNDVATVPAGSDGAASERSGSDAASAPSAAGSTAAGGAPEDDSDTDFVAEGLAMPKKWPNRKPFNVRDYFASVFGELKRWKQRMLQRPSAERMRACFIVYLRFYIQQSTMFRAFTHPELNEQKKELLEGLEFDPAMKNLMTEDEEPEEPAVDMSESVTRLVYEKIPVAVVRCAVKNFGIRVTYANPMASAMFGYDDGEVIKTPLCDELLFRAFHESEWHRFAKECCASVAARAEKFQFRGLFANKNGETFEAVLSVSITYSGRGIPKNATIFIQKSDVVRRDSLMD* # PASA_UPDATE: g7188.t1, single gene model update, valid-1, status:[pasa:asmbl_7603,status:3], valid-1 NODE_477_length_22977_cov_43.3504 . gene 4263 7004 . - . ID=g7188;Name=g7188.t1 NODE_477_length_22977_cov_43.3504 . mRNA 4263 7004 . - . ID=g7188.t1;Parent=g7188;Name=g7188.t1 NODE_477_length_22977_cov_43.3504 . five_prime_UTR 6942 7004 . - . ID=g7188.t1.utr5p1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 6733 7004 . - . ID=g7188.t1.exon1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 6733 6941 . - 0 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 6096 6577 . - . ID=g7188.t1.exon2;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 6096 6577 . - 1 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 5433 5659 . - . ID=g7188.t1.exon3;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 5433 5659 . - 2 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 5103 5155 . - . ID=g7188.t1.exon4;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 5103 5155 . - 0 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 4803 4877 . - . ID=g7188.t1.exon5;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 4803 4877 . - 1 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . exon 4263 4606 . - . ID=g7188.t1.exon6;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . CDS 4558 4606 . - 1 ID=cds.g7188.t1;Parent=g7188.t1 NODE_477_length_22977_cov_43.3504 . three_prime_UTR 4263 4557 . - . ID=g7188.t1.utr3p1;Parent=g7188.t1 #PROT g7188.t1 g7188 MHNGRDKIGQVEVDWRSLALGKKYERKTIGFGDYDKKRRKHKDVVFIREISVAAGALGCALWDGGVILARWIYDNPTEFRGKTVLELGSGCGLAGILCARYADHVTLTDYIDTVLDNIEYNIKINSDPDGYRDSSDEDEAADDAPKQTWSGTNASVGFLDWDAVRDETSGDASDGVGSGQKDAAAAECTCKEHGKAFLTQNWFRCRQCYGDAAAEGCCAACAAKCHGGHEGVVFAESSRFRCDCFGSESCRFSMRDRTNIDIAPVDIIIGAELTYSLLSVVSLVRVCKAFLKPGGTFYEVLSDDRDGVSEFVRQIGDAGFTVDSKPIPPKYMGNYNTRDWTYQDKETYKLFMFTKPSDWTPRRA* # ORIGINAL: g7192.t1 original gene structure, not modified by PASA NODE_477_length_22977_cov_43.3504 AUGUSTUS gene 15031 17070 . - . ID=g7192;Name=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS mRNA 15031 17070 . - . ID=g7192.t1;Parent=g7192;Name=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 16901 17070 . - . ID=g7192.t1.exon1;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 16901 17070 . - 0 ID=cds.g7192.t1;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 16630 16776 . - . ID=g7192.t1.exon2;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 16630 16776 . - 1 ID=cds.g7192.t1;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 15371 16361 . - . ID=g7192.t1.exon3;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 15371 16361 . - 1 ID=cds.g7192.t1;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 15031 15177 . - . ID=g7192.t1.exon4;Parent=g7192.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 15031 15177 . - 0 ID=cds.g7192.t1;Parent=g7192.t1 #PROT g7192.t1 g7192 MSNLIVIDNFIGGRSVPATAHFDSFNPSTGHVLCRIPDSGAEEIDAAVKAAQAAFPAWSSKPREERSKLLYKVADLLESRLEEFARAESTDQGKPLWLARTVDIPRAVYNFRFFAGAVLHSTERASHNDQVGAINYTLRQPVGVAGLISPWNLPLYLLTWKIAPALATGNTVVAKPSEITSLTASLLASVLADAGIPAGVCNLVFGLGSKAGAALVQHPDVPLISFTGGTATARHIIEKSAQFYKKLSLELGGKNAAVIFDDCNFDECVATTVRSSFTNQGEICLCSSRILIQKGIFDRFVAAFAAQTRTIVVGAPDAEGTRMGALVSKEHLGKVQSYVQIARDEGATIHCGDGVDALELPEANRGGYFMRPTIISGVSLESRCVKEEIFGPVVVCVPFETEDDAVTIANSVEYGLAACVWTENGSRMHRVARRLQAGTVWGNCWMVRDLNMPFGGMKASGIGREGGEYSIEFFTEEKTVCIKY* # PASA_UPDATE: g7187.t1, single gene model update, valid-1, status:[pasa:asmbl_7602,status:3], valid-1 NODE_477_length_22977_cov_43.3504 . gene 541 3686 . - . ID=g7187;Name=g7187.t1 NODE_477_length_22977_cov_43.3504 . mRNA 541 3686 . - . ID=g7187.t1;Parent=g7187;Name=g7187.t1 NODE_477_length_22977_cov_43.3504 . five_prime_UTR 3446 3686 . - . ID=g7187.t1.utr5p1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . exon 3043 3686 . - . ID=g7187.t1.exon1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . CDS 3043 3445 . - 0 ID=cds.g7187.t1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . exon 2703 2889 . - . ID=g7187.t1.exon2;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . CDS 2703 2889 . - 2 ID=cds.g7187.t1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . exon 2125 2584 . - . ID=g7187.t1.exon3;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . CDS 2125 2584 . - 1 ID=cds.g7187.t1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . exon 1795 1943 . - . ID=g7187.t1.exon4;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . CDS 1795 1943 . - 0 ID=cds.g7187.t1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . exon 541 1579 . - . ID=g7187.t1.exon5;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . CDS 1027 1579 . - 1 ID=cds.g7187.t1;Parent=g7187.t1 NODE_477_length_22977_cov_43.3504 . three_prime_UTR 541 1026 . - . ID=g7187.t1.utr3p1;Parent=g7187.t1 #PROT g7187.t1 g7187 MDAALKRPVAPKETGILTNMQLAAAASGQHNAALAHAHGQLPPGALGLADPAALLALEMQMQSAAAYGLLDGFLDPNLDIFGNPNPFAAFGAMPPGGLGQLGMPMPMGLGMPPDAFLQQMAGLGGFTSFPGSSEGSNAVSVPMPMPIQGLMTVKQEDVGFSPPGETSLDEIMSSIQSMRNGESPYDGYSTESDRRDSMSGEPSPSEFGDNVQAAAVRRSAHIAAEQKRRNNIKEGFDQLQHMIPACKKAPSSKFSKATVLRKAVDYIAHMIREKSTLVEEVNRLRKEVCQLRLIIKNFQQYGQLTDADMKAIASAATGGGGSSVPVRTGGGTATQPPNPNFLAENVKFYIFCSVVDGLFESFNSTVSLDSPDAFSASLMAWFDQYCRPESLRESFLVSLRMLGSRFFTEDSINRVKRWSGGLSACTESLSCKLEYMNVPMVQKIGETITNVVTMFNGTGAGRRASQGQQGVADASQGQGQQQQQQQQQQQPQQQQQQSQSQSQSQQGNLGLGLGLGLGSGAIPLQMQQQIQQLHQHFQQQQQQQQQQHQQHQQSLSAAQQQQAAAMAAAMAAGLHGFPQPPRV* # ORIGINAL: g7194.t1 original gene structure, not modified by PASA NODE_477_length_22977_cov_43.3504 AUGUSTUS gene 20582 22288 . - . ID=g7194;Name=g7194.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS mRNA 20582 22288 . - . ID=g7194.t1;Parent=g7194;Name=g7194.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 20582 22288 . - . ID=g7194.t1.exon1;Parent=g7194.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 20582 22288 . - 0 ID=cds.g7194.t1;Parent=g7194.t1 #PROT g7194.t1 g7194 MTSVSPRKAVEKDPAAIQRETAAYVEHINNMLSGDVKLDGLIPISEPNEFFTKARNGVLLCKIVNAIKPGTIDESKINYSAAVGNIKTPGTKDAWEIAENNNMAIEGAKKIGVKVVNIGNEDILGGNVDLLLGLAWQMIRAHLLAEVNVASHPELVRLLRKGEGIRDLLDVSAEQVLLRWFNYHLARAGHPRTVANFSSDISDSECYAALMCQIAPDFADSALVRNLTGQTDLEARADAVLQHAAKLGCRRFVTAKDIAEGHSRLNLAFTATLFNAHIGIRMPTEEEIAEIYQRMEMLEATIADLRSALRGKEHEAQTAAHNHSATATALKHAVEALTANCTNAQAELEELRSRIADCEGASKEFAETVKSQMEQARRHDMELRSTILYGATRSNADISRKIEERLNDLTAAHGAPASAFDSMRECEEVLKDLLSLIQEENADLRARQDVNVLRQAESRDRMRTDILSAIGGDASKVLAECKGDNEDDSIERLVARLCELAVAQQKEIADQRDKMKRMDAINQIMGEKIREIAEMNSKKEDEPCPKCGKSPKSERREKTVKGATPRAE* # ORIGINAL: g7193.t1 original gene structure, not modified by PASA NODE_477_length_22977_cov_43.3504 AUGUSTUS gene 17459 19562 . + . ID=g7193;Name=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS mRNA 17459 19562 . + . ID=g7193.t1;Parent=g7193;Name=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 17459 17573 . + . ID=g7193.t1.exon1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 17459 17573 . + 0 ID=cds.g7193.t1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 17835 18051 . + . ID=g7193.t1.exon2;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 17835 18051 . + 2 ID=cds.g7193.t1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 18283 18323 . + . ID=g7193.t1.exon3;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 18283 18323 . + 1 ID=cds.g7193.t1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 18454 18593 . + . ID=g7193.t1.exon4;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 18454 18593 . + 2 ID=cds.g7193.t1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 19033 19302 . + . ID=g7193.t1.exon5;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 19033 19302 . + 0 ID=cds.g7193.t1;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 19386 19562 . + . ID=g7193.t1.exon6;Parent=g7193.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 19386 19562 . + 0 ID=cds.g7193.t1;Parent=g7193.t1 #PROT g7193.t1 g7193 MSSFDGVITEYAGVMVDCFAGSAHLPAASVYFLSHFHKDHTRGLERATLGNTPIYCSAVTRYLLLSDPDYAHLESILVPMDEGEPTQIPLSDGTHVTVTLVDANHCPGSVMFLFEGANGTILYTGDFRFENPEEFLKDIPCLHSGGVVKHIDKAYVDNTFAVKKFATFPSRIHIGSEKMASYARCKERAPISAFLSRVSVTASDAAVGSFLGVHACSPYCESLRDSATRTVIIKPSAMWFLGDGKAPPARVPRVQTHLRVWHVFHSMHSSLDEFRGTMNYLRPIDISPIVKSMGCANLTETRLELFSLLNMRRPEEVMV* # PASA_UPDATE: g7189.t1, single gene model update, valid-1, status:[pasa:asmbl_7599,status:3], valid-1 NODE_477_length_22977_cov_43.3504 . gene 7217 9020 . + . ID=g7189;Name=g7189.t1 NODE_477_length_22977_cov_43.3504 . mRNA 7217 9020 . + . ID=g7189.t1;Parent=g7189;Name=g7189.t1 NODE_477_length_22977_cov_43.3504 . five_prime_UTR 7217 7331 . + . ID=g7189.t1.utr5p1;Parent=g7189.t1 NODE_477_length_22977_cov_43.3504 . exon 7217 9020 . + . ID=g7189.t1.exon1;Parent=g7189.t1 NODE_477_length_22977_cov_43.3504 . CDS 7332 9002 . + 0 ID=cds.g7189.t1;Parent=g7189.t1 NODE_477_length_22977_cov_43.3504 . three_prime_UTR 9003 9020 . + . ID=g7189.t1.utr3p1;Parent=g7189.t1 #PROT g7189.t1 g7189 MASGDSGVAGAPTQPQTMDFVGLMGELGGLPFLTGLLNRLTTVLDFGIQKRVDIRQGLEYLLDGAEVHRMVEGFADGIPSDGVTAVDPSLLHIRWGPIDEPRMSAVLDASGATPTSSRRSSTSSSVSKGGSDLKATVAGDASTGDTPTPAPTPSAQKGDAMPSGTPANLSPNVASEVLIPSPPDNQFRIRLVAGAAASESNHIGGLAGVDDFFSASWFKSFLERLFASTFTHTDADLISAAEAQFPLSWAVWGRVFVLDKITMYEPNRTPEGLVSFALRLPINMRVLREHYPHIADLFDFLAHIGVSIGSSGGDPRKVIARMSYDASSKSMTVRALLRPSDGRLVWSTAADPLKPFIDDAPGAASREPIPFSFDLSEEPALSVVIDTSAKLLLNLASVRLPRMDFELSSPRNGRAVFRLKGVDSAWIFFRKLFGFERIIQCMINHFAVHIGLGSRPALAAPAAVEKTHATKGAVDSNVDGVPPTAGDSGVAVGAAPPGDIRHWFNMTFHGVLPRTLAVRVIARMWRYFVHSEAYMDILFLARDLCTGFVADLIKYQ* # ORIGINAL: g7191.t1 original gene structure, not modified by PASA NODE_477_length_22977_cov_43.3504 AUGUSTUS gene 13382 14773 . + . ID=g7191;Name=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS mRNA 13382 14773 . + . ID=g7191.t1;Parent=g7191;Name=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 13382 13398 . + . ID=g7191.t1.exon1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 13382 13398 . + 0 ID=cds.g7191.t1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 13522 13708 . + . ID=g7191.t1.exon2;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 13522 13708 . + 1 ID=cds.g7191.t1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 13918 14042 . + . ID=g7191.t1.exon3;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 13918 14042 . + 0 ID=cds.g7191.t1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 14172 14253 . + . ID=g7191.t1.exon4;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 14172 14253 . + 1 ID=cds.g7191.t1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 14488 14613 . + . ID=g7191.t1.exon5;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 14488 14613 . + 0 ID=cds.g7191.t1;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS exon 14747 14773 . + . ID=g7191.t1.exon6;Parent=g7191.t1 NODE_477_length_22977_cov_43.3504 AUGUSTUS CDS 14747 14773 . + 0 ID=cds.g7191.t1;Parent=g7191.t1 #PROT g7191.t1 g7191 MADDASVKLLTPPEAFGIVEPSVYRSNSPFPVNFSFLKTLELRTVVVLSPEKPLRAVLDFFEECSINMVHLGLKAWKPDVTWKPVSEELIKECLEIVLDSTKYPVMVMCTSGVHQTGTLVGCLRKLEGWNLTSIVNEYRMYAGAKNRYINEQFIELFDLDLITLPHTLPTWFVDQVTMTQNEKQRLQ* # ORIGINAL: g2859.t1 original gene structure, not modified by PASA NODE_7686_length_416_cov_139.132_potentialcontaminant AUGUSTUS gene 2 306 . + . ID=g2859;Name=g2859.t1 NODE_7686_length_416_cov_139.132_potentialcontaminant AUGUSTUS mRNA 2 306 . + . ID=g2859.t1;Parent=g2859;Name=g2859.t1 NODE_7686_length_416_cov_139.132_potentialcontaminant AUGUSTUS exon 2 306 . + . ID=g2859.t1.exon1;Parent=g2859.t1 NODE_7686_length_416_cov_139.132_potentialcontaminant AUGUSTUS CDS 2 306 . + 2 ID=cds.g2859.t1;Parent=g2859.t1 #PROT g2859.t1 g2859 GEVSMAFYGFIDVDMDAKRRRLEADGKMTPVQVNDFMEDRRKLLRSAEVRRRLFPPNEIIANLDALQSKYKHLAPSLFKTSMQAVFSNVAATVEQGFLKE* # ORIGINAL: g10176.t1 original gene structure, not modified by PASA NODE_3955_length_2463_cov_40.5973 AUGUSTUS gene 359 2129 . + . ID=g10176;Name=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS mRNA 359 2129 . + . ID=g10176.t1;Parent=g10176;Name=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 359 498 . + . ID=g10176.t1.exon1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 359 498 . + 0 ID=cds.g10176.t1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 694 751 . + . ID=g10176.t1.exon2;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 694 751 . + 1 ID=cds.g10176.t1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 945 1119 . + . ID=g10176.t1.exon3;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 945 1119 . + 0 ID=cds.g10176.t1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 1525 1624 . + . ID=g10176.t1.exon4;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 1525 1624 . + 2 ID=cds.g10176.t1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 1856 1934 . + . ID=g10176.t1.exon5;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 1856 1934 . + 1 ID=cds.g10176.t1;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS exon 2091 2129 . + . ID=g10176.t1.exon6;Parent=g10176.t1 NODE_3955_length_2463_cov_40.5973 AUGUSTUS CDS 2091 2129 . + 0 ID=cds.g10176.t1;Parent=g10176.t1 #PROT g10176.t1 g10176 MGRITAGGFGAMSAAKASAAAPSRSIFRNWKYAAIALTCLGLFFYNWVLGVMWAFVSDCSIDRSYQGEVVKLTSATAKALEEAKVDYWLDLGTLLGAQRNGRMIGHDSDSDIGIHQKDAEKVIKLFENHPDVILLKQKLEGIEIMRIYSRHVGDQTTKYAHVDLYEYIPKGTGMLYHIVEQTELFPVLISCVKFAR* # ORIGINAL: g13834.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 10578 12454 . + . ID=g13834;Name=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 10578 12454 . + . ID=g13834.t1;Parent=g13834;Name=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 10578 11016 . + . ID=g13834.t1.exon1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 10578 11016 . + 0 ID=cds.g13834.t1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 11165 11292 . + . ID=g13834.t1.exon2;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 11165 11292 . + 2 ID=cds.g13834.t1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 11438 11533 . + . ID=g13834.t1.exon3;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 11438 11533 . + 0 ID=cds.g13834.t1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 11704 11855 . + . ID=g13834.t1.exon4;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 11704 11855 . + 0 ID=cds.g13834.t1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 12061 12106 . + . ID=g13834.t1.exon5;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 12061 12106 . + 1 ID=cds.g13834.t1;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 12263 12454 . + . ID=g13834.t1.exon6;Parent=g13834.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 12263 12454 . + 0 ID=cds.g13834.t1;Parent=g13834.t1 #PROT g13834.t1 g13834 MASTRSHLSRMEQDGFTVVSKRQGRAQNAPLRTRAAVSACCGDHGGSGDFVYRSVPSLSGRGGSGVMNGIEGVGLHGHEEEELAARTLVGRVAKERYLMIIWRTRNAFNELHVSMVPRITFNPDIENTFPTGRDELVRSEYAASIVALLRGSLCPPVEDFVCYGIGSIDGSTNARTQMAVFLALWELMAPRGSISLYEPYMTAVERAAVTRMGCALIPNNEEGKRCAVRPTLFFMPHCSVRLYSNLLWANWTRDGLANIAIVGNSFGNYDLRSPRAQLELKAPYIARAIAGGLVEETGLPPLGPNDVTMNDTSLHCFPRGAVALASDAIMVRGTEPAPTDAAADPDFVAG* # ORIGINAL: g13837.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 15899 18406 . - . ID=g13837;Name=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 15899 18406 . - . ID=g13837.t1;Parent=g13837;Name=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 17928 18406 . - . ID=g13837.t1.exon1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 17928 18406 . - 0 ID=cds.g13837.t1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 17593 17835 . - . ID=g13837.t1.exon2;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 17593 17835 . - 1 ID=cds.g13837.t1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 17320 17441 . - . ID=g13837.t1.exon3;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 17320 17441 . - 1 ID=cds.g13837.t1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 17009 17181 . - . ID=g13837.t1.exon4;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 17009 17181 . - 2 ID=cds.g13837.t1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 16699 16901 . - . ID=g13837.t1.exon5;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 16699 16901 . - 0 ID=cds.g13837.t1;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 15899 16559 . - . ID=g13837.t1.exon6;Parent=g13837.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 15899 16559 . - 1 ID=cds.g13837.t1;Parent=g13837.t1 #PROT g13837.t1 g13837 MQTGTAQDVAERVVREGRRRHFRMRCLAMDDYNRGSLINERFALFVCATTGQGEEPDNMLQFWRFLRRKSLPADSLCRLEFSVFGLGDSSYSKFNFVAKKLHARLLQLGATPFLERAFGDDQHELGLDAGLDPWLDGLWKRLLERFPLSPGKELVPASHRPSPRYNVVFTEATTARVWACAVESRSSLDIEIGGGSFPAFQQPDRRTPFMATVTANTRLTAEDHFQDVRHIELDVAGSGFSYEPGDVLAMQPRNLPAAAAAFLEYLSLDPDACFVLTQNDPDTPLPTGMRFPCTVREAVERFVDFNAVPRRYFFELLAHFAKDERESVRLREFATAAGQEDLYTYCNRVRRTSFEVLQDFPSVRGNIPLPYLFDLFRPIQPRLFSISSSPLRHHNSIHITVAIVSYRTKLLAPRRGLCTSWLASLEPGLPDARIPVWIRKGTLRLPADAHVPIVMIGPGTGVAPFRSFVHQRIAAARGAVEDVVAADDQQVHGDAAPKVTPTPAVARTLLLFGCRGRQRDYLYASEWEALSSESNGSFSLIAAFSRDQESKEYVQHKIREHASDIASLVAAGAHLYVAGNSKRMPEDVREALVDAIVSISHVTADRAKEMLMAVESEGRLKFETWS* # ORIGINAL: g13840.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 22864 25637 . + . ID=g13840;Name=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 22864 25637 . + . ID=g13840.t1;Parent=g13840;Name=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 22864 22933 . + . ID=g13840.t1.exon1;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 22864 22933 . + 0 ID=cds.g13840.t1;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 23062 23213 . + . ID=g13840.t1.exon2;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 23062 23213 . + 2 ID=cds.g13840.t1;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 23348 23599 . + . ID=g13840.t1.exon3;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 23348 23599 . + 0 ID=cds.g13840.t1;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 23771 23891 . + . ID=g13840.t1.exon4;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 23771 23891 . + 0 ID=cds.g13840.t1;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 24055 25637 . + . ID=g13840.t1.exon5;Parent=g13840.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 24055 25637 . + 2 ID=cds.g13840.t1;Parent=g13840.t1 #PROT g13840.t1 g13840 MWASRLSVLPGVARSALPGAPCAGRAGHARTARLHFAIDPHARKLDDTTHIVGSVTARTAKKGTERKGKALRGHETIASTLARVRTQLASGNGAAALPQVAESIFVWLDPLGRAGNNPVSRVAVDLAYGEVAAGLARGGAAAVAETAVVGRWIRHHLGGRNKPRATANIPLCAVIDAYASEGKLDDAFRGKCQLGCMALLRIGEAAGVHLGIRGRTAIVLALCKKGDVRKALVTLEDATRSMGTSGVPPQRLPEAVCTAILRAAVGVDGDGRDAVLKSALEINERGRTLGPAAFATLATTATSIDHLWTLLADFGDMKGFRHSPLTVEAAVSACLRLGDVNTAFVVASVLCRKKGGGVDPPLAPSVGMPDAMGRMHHGTVVALRPSLQCFHMLLDACASRGMDRAARRLVSAMHSLGHTVDHRALAAVMRACAAAGSSVGMERAWQSTVSLGSPSFCSLFARVEACIVLDDRAGFENSVTLMQSAGMRRMKRGELHTLLGTAMRTKRPAYASRLLESLRVFGRPTATTLALLAGSLSRREDEGYLTHFLSWMVAAGAREGAFDANALLPAVATVGGGMESALILVSRVLESGHGRDRLLVQPLMDGGELDPAVEGRTDDDGVEEHHQRLPVAVFAKQLQGTVAESICAALRSVVGQQRSGVTADAQRAAQSLNRIVRSVYGHERLRERSLKRRTNAANAKSDAGDALGGAADDVRTPSPSDGSVR* # ORIGINAL: g13841.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 25978 26381 . + . ID=g13841;Name=g13841.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 25978 26381 . + . ID=g13841.t1;Parent=g13841;Name=g13841.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 25978 26142 . + . ID=g13841.t1.exon1;Parent=g13841.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 25978 26142 . + 0 ID=cds.g13841.t1;Parent=g13841.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 26226 26381 . + . ID=g13841.t1.exon2;Parent=g13841.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 26226 26381 . + 0 ID=cds.g13841.t1;Parent=g13841.t1 #PROT g13841.t1 g13841 MSHPVGVPDPSSFANLDEIVSRHISLDVRVDFDRKVLNGSVTINVETVREGSNTLILDTRDLTIFSVIDADSHRPLNYELKEGGHTFGRPLHVTLPEGRSAQVGST* # ORIGINAL: g13832.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 3025 7810 . - . ID=g13832;Name=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 3025 7810 . - . ID=g13832.t1;Parent=g13832;Name=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 7748 7810 . - . ID=g13832.t1.exon1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 7748 7810 . - 0 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 7419 7568 . - . ID=g13832.t1.exon2;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 7419 7568 . - 0 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 6820 7175 . - . ID=g13832.t1.exon3;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 6820 7175 . - 0 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 6358 6462 . - . ID=g13832.t1.exon4;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 6358 6462 . - 1 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 5845 6073 . - . ID=g13832.t1.exon5;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 5845 6073 . - 1 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 3911 5659 . - . ID=g13832.t1.exon6;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 3911 5659 . - 0 ID=cds.g13832.t1;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 3025 3585 . - . ID=g13832.t1.exon7;Parent=g13832.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 3025 3585 . - 0 ID=cds.g13832.t1;Parent=g13832.t1 #PROT g13832.t1 g13832 MPSMNEGDPLLGGQRSTRTASSPPKQPKESGPVRRWPLKGSVDGNIITVCCVAYAAAGIILAFFRPWVLALGGSGASATEYQFALLRFTTTNAGGSQTESYRDVDCGRCVAAGIVGVACLGGAAVLLGVALILFLLKALRYIRAKGSLLPLVFTGCGSLTLAASVTWISVCRPHLEGLVSLKYRGDTLGEPIALLPASTGFCVIAAVANSSRVVKTLSKIFDKKSMDHLGINFAVFTRVMRLLIRGHVLLAFVAVWPSIQSNVEDASNVNLDPIGAQGAPVALNYFAYVGLVLIAFGAFHWERFWRQKLERRNQLMRVAVDRQSMSTPPRGQRTAQSASFVAAALESSELSAADYTVLVQNVPTDCTSARELSAFFEGNVGPVAMTTIVPQGLSPFLCARREWDVQLRGMSLYGARASIPQGGEDTDNDTDLDDMETGSRKAASLNDDDDGGADPAIRTLRPSFGGGDDDSDDSDDSGDRARDRAGASGDVRAAARGGHRDRAGAPNPRGALGSAAAVERRKVPRRSSLSQAIEMERCLPLHPRVSHGDLVCMTAVSRERIAQLRAACNDMEMMRAAQQCPSEGVAAPSGRKVSEGDRAILEGMLGSSFAFVTFRRTLDAAKCHALFVQDSRQAFVRLVAGSKREYPRFKGVLLQVEPAPRPEDVDWESLSNGHGIGGRVLRMTAFWVASITVGFAVVWLLYLLKASKHYISPADSTDERRLWTGAGFAFFLAAPITFVHRVACWIVRTLANWAPSPSRSDRDRLRIECSVLVLGAAQAFLVPTLLGGPPADVESSGDFWWPHYFSIPFNEFQVLALATVTVKVAVHAFLAVCHPVFWMRRWLLCRSARDLAQLREMHLRPAIDMAGEVVFVLDVIMWCILYIKISATTLVLAPIALAAIFLVASWAYTHTHRRPPRSESTYHILSTSVQTLTGTGLFLCLLVSAVSGLLDVLLIDRDCERRTQAKHFSDDASRGYLALFLTLAVALGGRALHIFFERCIRPFWRMQWVVSSPWEERPPFHRLVARSGGRLHVPPLTPDLDVVQAQRLRALTVSYEFEVPWGQRRSIERL* # PASA_UPDATE: g13833.t1, single gene model update, valid-1, status:[pasa:asmbl_5859,status:3], valid-1 NODE_329_length_26846_cov_43.4067 . gene 8278 10297 . - . ID=g13833;Name=g13833.t1 NODE_329_length_26846_cov_43.4067 . mRNA 8278 10297 . - . ID=g13833.t1;Parent=g13833;Name=g13833.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 10161 10297 . - . ID=g13833.t1.utr5p1;Parent=g13833.t1 NODE_329_length_26846_cov_43.4067 . exon 9903 10297 . - . ID=g13833.t1.exon1;Parent=g13833.t1 NODE_329_length_26846_cov_43.4067 . CDS 9903 10160 . - 0 ID=cds.g13833.t1;Parent=g13833.t1 NODE_329_length_26846_cov_43.4067 . exon 8278 9690 . - . ID=g13833.t1.exon2;Parent=g13833.t1 NODE_329_length_26846_cov_43.4067 . CDS 8617 9690 . - 0 ID=cds.g13833.t1;Parent=g13833.t1 NODE_329_length_26846_cov_43.4067 . three_prime_UTR 8278 8616 . - . ID=g13833.t1.utr3p1;Parent=g13833.t1 #PROT g13833.t1 g13833 MASEWNDESRLLPGGDDDDVPAYTQYHDLDNVNPSATHLLAHHDGAPTPRAVPLRLIGASCCLFGLVVIWVSMGELMAKVQETFEKPFFLTWMVHNFYLVFLLPWVFLERSVRRREKQRRHAAREVHPVLPLWREYLPHLKRALILNTLLFACVLTWYISLTRTSLSVNTGIYNSSPAFVFILSALILKEKVGPAKSLAVALSVGGVVLVAVSSKPAKDGPQTTPIGCALVVASAALYALYEVMGHPSADPSHKNGGEKAGHVDGEGAIGDDDVAAAKAAAAPAHAHGESSEALTVSCGLIRTVALMGVFNALLFPGLFVCDAAGWERMEWPTGDILMRICIAGVCDSVFNCLLLGGILLSSPLFISVGSMLTIPGSMVSDRILHGYVMPLQAMGGVLLIFAGFIILVAHAHIDRWLSSFVARVRSRGPSAGYEPLGAKTDDD* # PASA_UPDATE: g13835.t1, single gene model update, valid-1, status:[pasa:asmbl_5860,status:3], valid-1 # PASA_UPDATE: g13835.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5861,status:3], valid-1 NODE_329_length_26846_cov_43.4067 . gene 12209 14149 . - . ID=g13835;Name=g13835.t1 NODE_329_length_26846_cov_43.4067 . mRNA 12209 14149 . - . ID=g13835.t1;Parent=g13835;Name=g13835.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 14073 14149 . - . ID=g13835.t1.utr5p1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 14049 14149 . - . ID=g13835.t1.exon1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 14049 14072 . - 0 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 13753 13956 . - . ID=g13835.t1.exon2;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 13753 13956 . - 0 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 13533 13633 . - . ID=g13835.t1.exon3;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 13533 13633 . - 0 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 13162 13400 . - . ID=g13835.t1.exon4;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 13162 13400 . - 1 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 12938 13023 . - . ID=g13835.t1.exon5;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 12938 13023 . - 2 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 12640 12732 . - . ID=g13835.t1.exon6;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 12640 12732 . - 0 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . exon 12209 12499 . - . ID=g13835.t1.exon7;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . CDS 12473 12499 . - 0 ID=cds.g13835.t1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . three_prime_UTR 12209 12472 . - . ID=g13835.t1.utr3p1;Parent=g13835.t1 NODE_329_length_26846_cov_43.4067 . mRNA 12209 14149 . - . ID=g13835.t1.1.5b6be70b;Parent=g13835;Name=g13835.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 14073 14149 . - . ID=g13835.t1.1.5b6be70b.utr5p1;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 14049 14149 . - . ID=g13835.t1.1.5b6be70b.exon1;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 14049 14072 . - 0 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 13753 13956 . - . ID=g13835.t1.1.5b6be70b.exon2;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 13753 13956 . - 0 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 13533 13633 . - . ID=g13835.t1.1.5b6be70b.exon3;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 13533 13633 . - 0 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 12938 13400 . - . ID=g13835.t1.1.5b6be70b.exon4;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 12938 13400 . - 1 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 12640 12732 . - . ID=g13835.t1.1.5b6be70b.exon5;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 12640 12732 . - 0 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . exon 12209 12499 . - . ID=g13835.t1.1.5b6be70b.exon6;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . CDS 12473 12499 . - 0 ID=cds.g13835.t1.1.5b6be70b;Parent=g13835.t1.1.5b6be70b NODE_329_length_26846_cov_43.4067 . three_prime_UTR 12209 12472 . - . ID=g13835.t1.1.5b6be70b.utr3p1;Parent=g13835.t1.1.5b6be70b #PROT g13835.t1 g13835 MSYYPGQPGYPGAPGGYPGPQQGYPGAPQGYPGAPQGYPGAPQGYPGAPGGYPGAPGGYPGSSGAYGGPRGVNQGQGNSSFAFPPQYMADPLFANFQQVAGSDGQIDAEELQRCLAAANVAGPYSQFSVDTARLLILILDTDLSGTMGFEEYRQMWAAVQQWRQTFERFDRDRSGSIETAELHEAIKSYGFNISPRAAEVITRRYSRRGRSSITFDDFIACSAKLRFISDSFRRRDTTGQGYASLSYDDFIQFSMAI* #PROT g13835.t1.1.5b6be70b g13835 MSYYPGQPGYPGAPGGYPGPQQGYPGAPQGYPGAPQGYPGAPQGYPGAPGGYPGAPGGYPGSSGAYGGPRGVNQGQGNSSFAFPPQYMADPLFANFQQVAGSDGQIDAEELQRCLAAANVAGPYSQFSVDTARLLILILDTDLSGTMGFEEYRQMWAAVQQWRQTFERFDRDRSGSIETAELHEAIKSYGIAIVSVTSWLYFLPNAQFIRFDAQYVTGIWDQNSSLFVYVLDGCAGFNISPRAAEVITRRYSRRGRSSITFDDFIACSAKLRFISDSFRRRDTTGQGYASLSYDDFIQFSMAI* # PASA_UPDATE: g13836.t1, single gene model update, valid-1, status:[pasa:asmbl_5865,status:12], valid-1 NODE_329_length_26846_cov_43.4067 . gene 14517 15689 . + . ID=g13836;Name=g13836.t1 NODE_329_length_26846_cov_43.4067 . mRNA 14517 15689 . + . ID=g13836.t1;Parent=g13836;Name=g13836.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 14517 14618 . + . ID=g13836.t1.utr5p1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . exon 14517 14775 . + . ID=g13836.t1.exon1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . CDS 14619 14775 . + 0 ID=cds.g13836.t1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . exon 14905 14951 . + . ID=g13836.t1.exon2;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . CDS 14905 14951 . + 2 ID=cds.g13836.t1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . exon 15042 15101 . + . ID=g13836.t1.exon3;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . CDS 15042 15101 . + 0 ID=cds.g13836.t1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . exon 15192 15310 . + . ID=g13836.t1.exon4;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . CDS 15192 15310 . + 0 ID=cds.g13836.t1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . exon 15456 15689 . + . ID=g13836.t1.exon5;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . CDS 15456 15552 . + 1 ID=cds.g13836.t1;Parent=g13836.t1 NODE_329_length_26846_cov_43.4067 . three_prime_UTR 15553 15689 . + . ID=g13836.t1.utr3p1;Parent=g13836.t1 #PROT g13836.t1 g13836 MSEERRVMIAIDGSTYSDKAFEWAAKNFLRQGDVLTILHVYPPPVLPSMSFAYGFNLPYDVWQKNIEQAIGEARDLIHKFEQRCKDANIRYQTLLLHGTPGEMICASAEELNPVVLILGSRGLGAVKRALIGSVSDYCTHNCPSPVIVIKSSENESKAQ* # PASA_UPDATE: g13831.t1, single gene model update, valid-1, status:[pasa:asmbl_5864,status:12], valid-1 NODE_329_length_26846_cov_43.4067 . gene 165 2529 . + . ID=g13831;Name=g13831.t1 NODE_329_length_26846_cov_43.4067 . mRNA 165 2529 . + . ID=g13831.t1;Parent=g13831;Name=g13831.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 165 165 . + . ID=g13831.t1.utr5p1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 165 300 . + . ID=g13831.t1.exon1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 166 300 . + 0 ID=cds.g13831.t1;Parent=g13831.t1;5_prime_partial=true NODE_329_length_26846_cov_43.4067 . exon 450 611 . + . ID=g13831.t1.exon2;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 450 611 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 834 911 . + . ID=g13831.t1.exon3;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 834 911 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 1055 1087 . + . ID=g13831.t1.exon4;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 1055 1087 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 1268 1367 . + . ID=g13831.t1.exon5;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 1268 1367 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 1473 1726 . + . ID=g13831.t1.exon6;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 1473 1726 . + 2 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 1880 2059 . + . ID=g13831.t1.exon7;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 1880 2059 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . exon 2234 2529 . + . ID=g13831.t1.exon8;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . CDS 2234 2398 . + 0 ID=cds.g13831.t1;Parent=g13831.t1 NODE_329_length_26846_cov_43.4067 . three_prime_UTR 2399 2529 . + . ID=g13831.t1.utr3p1;Parent=g13831.t1 #PROT g13831.t1 g13831 VDVLKGLGAEIIRTPTEAPFDSPESHIGVARRLNKEIPNSHILNQYDNPSNPLAHYHYTAEEILFQCDNNVDMLVSAAGTGGTITGIARKLKERVPQCKIVGVDPIGSILAQPESLNTNINEAYKVEGIGYDFIPKVLDRSVVDEWVKSDDRTSFLMARRLIREEGLLVGGSSGSAVVAAIAAARNLKAGQRCVVILPDSTRNYMTKFLNEDWMLENNFVDEETEARRAADIAKWGSATVGHLNLPAPVTTTPQTSAKECVRIMSERGFDHLPVVRDGKVVGLVALGNLHSRITRGTVHPEDPASKCMFKFSRKRSFEDITVDTPLSTLTSFFEKNSIAFVTEKNTDRVIRHVLTKIDLLSFLVKHQQ* # ORIGINAL: g13838.t1 original gene structure, not modified by PASA NODE_329_length_26846_cov_43.4067 AUGUSTUS gene 19057 20279 . + . ID=g13838;Name=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS mRNA 19057 20279 . + . ID=g13838.t1;Parent=g13838;Name=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 19057 19116 . + . ID=g13838.t1.exon1;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 19057 19116 . + 0 ID=cds.g13838.t1;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 19241 19399 . + . ID=g13838.t1.exon2;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 19241 19399 . + 0 ID=cds.g13838.t1;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 19483 19790 . + . ID=g13838.t1.exon3;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 19483 19790 . + 0 ID=cds.g13838.t1;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS exon 19922 20279 . + . ID=g13838.t1.exon4;Parent=g13838.t1 NODE_329_length_26846_cov_43.4067 AUGUSTUS CDS 19922 20279 . + 1 ID=cds.g13838.t1;Parent=g13838.t1 #PROT g13838.t1 g13838 MAERGENAMLEAFKSILAGTAAGMASKSLEYPLDTVKVLLQTQSGANRAQVYTGPIDCIRKVVKAEGFGALYRGLSAPLAGAMLENAAIFTAFRQMQMLIQDDVRQPLGAKQAFACGAGAGIFSAVVLSPIELIKCRLQVQQESAGQKKKYSGALSCIGAIAREEGLRGFYKGFSATLIREIPGNAFWFGTFHTLCNAMTPEGKSRDDLPAYALIGSGAAAGALYWGVPYPADAVKSRMQTMTTPGSFVSVFRDIARESGIRGFYAGCLITVARAAPSNAVIFTVYEMTMRWLG* # PASA_UPDATE: g13839.t1, single gene model update, valid-1, status:[pasa:asmbl_5863,status:3], valid-1 NODE_329_length_26846_cov_43.4067 . gene 20319 22474 . - . ID=g13839;Name=g13839.t1 NODE_329_length_26846_cov_43.4067 . mRNA 20319 22474 . - . ID=g13839.t1;Parent=g13839;Name=g13839.t1 NODE_329_length_26846_cov_43.4067 . five_prime_UTR 22435 22474 . - . ID=g13839.t1.utr5p1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 22350 22474 . - . ID=g13839.t1.exon1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 22350 22434 . - 0 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 22087 22204 . - . ID=g13839.t1.exon2;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 22087 22204 . - 2 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 21936 21988 . - . ID=g13839.t1.exon3;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 21936 21988 . - 1 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 21642 21806 . - . ID=g13839.t1.exon4;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 21642 21806 . - 2 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 21334 21458 . - . ID=g13839.t1.exon5;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 21334 21458 . - 2 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 20830 21081 . - . ID=g13839.t1.exon6;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 20830 21081 . - 0 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . exon 20319 20649 . - . ID=g13839.t1.exon7;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . CDS 20515 20649 . - 0 ID=cds.g13839.t1;Parent=g13839.t1 NODE_329_length_26846_cov_43.4067 . three_prime_UTR 20319 20514 . - . ID=g13839.t1.utr3p1;Parent=g13839.t1 #PROT g13839.t1 g13839 MARSKKQQKQPVVKPDAAESHGNGNDASDASAAGTAEVPVVAANRVLKTKYINKQRVLVFCSRGINFRSRHLMTDMRSLMPHSKADVKLDKKDNLHVVNEVCELKSCNGCVFFEMRKRQDLYLWVSRTPHGPSAKFHVENIHTMDEMKLTGNCLKGSRPILSFDKAFDEEPHLLLLKEMFIQVFGTPRGHPKSKPFIDHVLSFSVVDNRIWFRNYQVVDTMGEKGKLETTLAEIGPRFTLNPIRIFGGSFGGPTLYENPNYVSPNEYRNSVKARLETKYKNRTVASELTKMRQEASKLPVSELDTVFDAE* # PASA_UPDATE: g4998.t1, single gene model update, valid-1, status:[pasa:asmbl_7253,status:12], valid-1 NODE_435_length_23790_cov_40.1519 . gene 8962 16388 . + . ID=g4998;Name=g4998.t1 NODE_435_length_23790_cov_40.1519 . mRNA 8962 16388 . + . ID=g4998.t1;Parent=g4998;Name=g4998.t1 NODE_435_length_23790_cov_40.1519 . five_prime_UTR 8962 9172 . + . ID=g4998.t1.utr5p1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 8962 9236 . + . ID=g4998.t1.exon1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 9173 9236 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 9458 9548 . + . ID=g4998.t1.exon2;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 9458 9548 . + 2 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 9769 9872 . + . ID=g4998.t1.exon3;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 9769 9872 . + 1 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 10070 10153 . + . ID=g4998.t1.exon4;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 10070 10153 . + 2 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 10554 10629 . + . ID=g4998.t1.exon5;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 10554 10629 . + 2 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 10867 10915 . + . ID=g4998.t1.exon6;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 10867 10915 . + 1 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 11127 11246 . + . ID=g4998.t1.exon7;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 11127 11246 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 11608 11740 . + . ID=g4998.t1.exon8;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 11608 11740 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 12007 12215 . + . ID=g4998.t1.exon9;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 12007 12215 . + 2 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 12309 12407 . + . ID=g4998.t1.exon10;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 12309 12407 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 12680 12734 . + . ID=g4998.t1.exon11;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 12680 12734 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 12931 12971 . + . ID=g4998.t1.exon12;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 12931 12971 . + 2 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 13199 13347 . + . ID=g4998.t1.exon13;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 13199 13347 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 13655 13906 . + . ID=g4998.t1.exon14;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 13655 13906 . + 1 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 14113 14200 . + . ID=g4998.t1.exon15;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 14113 14200 . + 1 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 14439 14597 . + . ID=g4998.t1.exon16;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 14439 14597 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 14862 14932 . + . ID=g4998.t1.exon17;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 14862 14932 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 15210 15252 . + . ID=g4998.t1.exon18;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 15210 15252 . + 1 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 15496 15570 . + . ID=g4998.t1.exon19;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 15496 15570 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . exon 15803 16388 . + . ID=g4998.t1.exon20;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . CDS 15803 16123 . + 0 ID=cds.g4998.t1;Parent=g4998.t1 NODE_435_length_23790_cov_40.1519 . three_prime_UTR 16124 16388 . + . ID=g4998.t1.utr3p1;Parent=g4998.t1 #PROT g4998.t1 g4998 MGGSNSKLDNEQIRRLQEFTTFSTKKLNQIWCDYRNFIVNELKEDSGTAEKSYELTYDNFKTFITKYFNMDADEVFYKRLFETFDTDKNQRISFKEIVISASILETGSIEDKLDFMFKVYDEDSSGYLETKEINHILDQMLAAASAFGQDSAALRPALSEMVRTLDADGKGKISRDEWIRGGLKNVPILIALGLDQTLYNTQKIQEGTHQWYLKHFNSPAYCNFCDKMLLGLGKQGLACQVCRFTVHESCALEVGRNCRPSYVKREFDSLNMPHHWLAGNFGRSACALCTKQCGGHKGLSGLRCSWCKATVHDECQAEYPKTCDLGEFRRLIIPATGFTLKTSSSTEEPTAKMAEMGLSESPSSKGLAFNSMEMEIHAAPNSCPLVVFINPHSGGRQGVKLLRTFKYLLNPRQVFDLSQGGPIPGLKQFKDVPNFRVLCCGGDGTVGWVLASLDKLQLKPEQLPAVGVLPLGTGNDLARVLGWGGGYAGEDVRKLLLQLQDSEPVMLDRWRMSVTPSNPDIPSDEMPLDIVNNYFSIGVDASVAHKFHMMREKYPHKFKSRARNKLWYLEFSTKDAFAHTCKNLHKTIKLEVDGKEIDLSKGPTLEGLALLNIPSMYGGANLWGNNIDEEHKFFEQSLADKKLEVVGLYSLMHVGLIRGGLAGNAYRIAQCSSVKITTLKTLPFQTDGEPWMQSPCVVEISHMNQMPLLQKTKRPGQDPGSPTTSRASQNSVASIQGSASVDGWSPTDPSPLDNEDGKKL* # PASA_UPDATE: g4996.t1, single gene model update, valid-1, status:[pasa:asmbl_7252,status:12], valid-1 NODE_435_length_23790_cov_40.1519 . gene 42 6154 . + . ID=g4996;Name=g4996.t1 NODE_435_length_23790_cov_40.1519 . mRNA 42 6154 . + . ID=g4996.t1;Parent=g4996;Name=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 42 1355 . + . ID=g4996.t1.exon1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 42 1355 . + 0 ID=cds.g4996.t1;Parent=g4996.t1;5_prime_partial=true NODE_435_length_23790_cov_40.1519 . exon 1533 1841 . + . ID=g4996.t1.exon2;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 1533 1841 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 2014 2256 . + . ID=g4996.t1.exon3;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 2014 2256 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 2499 2672 . + . ID=g4996.t1.exon4;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 2499 2672 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 2929 3123 . + . ID=g4996.t1.exon5;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 2929 3123 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 3461 3538 . + . ID=g4996.t1.exon6;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 3461 3538 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 3683 3779 . + . ID=g4996.t1.exon7;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 3683 3779 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 4018 4142 . + . ID=g4996.t1.exon8;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 4018 4142 . + 2 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 4360 4441 . + . ID=g4996.t1.exon9;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 4360 4441 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 4625 4775 . + . ID=g4996.t1.exon10;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 4625 4775 . + 2 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 5070 5193 . + . ID=g4996.t1.exon11;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 5070 5193 . + 1 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . exon 5539 6154 . + . ID=g4996.t1.exon12;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . CDS 5539 5823 . + 0 ID=cds.g4996.t1;Parent=g4996.t1 NODE_435_length_23790_cov_40.1519 . three_prime_UTR 5824 6154 . + . ID=g4996.t1.utr3p1;Parent=g4996.t1 #PROT g4996.t1 g4996 LDKIAWSDDGQLLCVSTKTGKLYTFLTKMPVLGSAFGTKVAHLTSLLEVTVEDAIEKERPVTVSLDVEPAFVALGSCYVAVGMNNRAWFYASVDRGYEPVGEREYVGSITKMALNSDYAAVLHEGRVLLHMIEGTGDANDEVATDGDRSSQMFPDADSEAKVQSVALTNEFLIYGSDAGSITYFMLEDWHQVTEFRHVVGIKDVFPDVGGSRLIFFDEKNDGFLFTPVNDALIEIPHFSAKARGALWDNHTRSRNCFVVYDDEKIQTYIACLSLRGAPEIRHVGSTKLPFGHAPLMMHNGAVTCLTQSGRTASVTLTTHELVRNSQHVNTNQLAECLQQHVDLHRFSDAWPVARLVDEAEAWQKLGKAALEQLDIPFAIRVYRQLKDVGMVLALQRLDGLEDRSLLCGHVALMSSHFDTAQALFLQSSYPAAALEMRKDLLQWDQALQLAKTLSPVNVPYISKEYAQQLELKCEYGRALQMFEAGITNSDAEIDHDVACQCGIARMAIRTNDFRRGIRLATELDNRQLYRDCGSALEAMKQFSEAGTMFEKGRFFDRAVQVYLITKNYAKAGELLENVSTPKLHVQYAKAREAEGKYKEAVRAYQNAKDYDSVIRIYLDNLKNPEEAVRIVRETQSSDGARMVAKFFQNMGEFRPAVEFLVVSKQIDEAFKIAQANDVMEVFAEVIGSDGSTEDYQSIALYFEGKNNHLLAGKFFMKCGQHTKALRHFLAAPIGDGESIDYAIETVGLAKNERLVHTLIDFLMGDTDGQIKDPKYIFKLWMSLKQYREAARTAIIIAREEQNNGHYREAHDTLFKMYKELEQQKIRIPAEMVSNLMILHSYILVKMHIKQEDHLTGARMLIRVANNISKFPTHIVPILTTTVIECQRSNLKNSAFSYAAMLMRPEYRTKIDAKYKRKIEMIVRKPERNEEEEPKTACPYCKNMVPQSELNCPDCKNTLPYCIATGFHMEAEDWSVCPMCQFPALYSKFSKLIELERKCPMCTAEITPTSITHILDPRQYLAQYSEMEKEPKENKAAASNAVGDGIITLEDEKENSTNV* # ORIGINAL: g4999.t1 original gene structure, not modified by PASA NODE_435_length_23790_cov_40.1519 AUGUSTUS gene 17269 18426 . + . ID=g4999;Name=g4999.t1 NODE_435_length_23790_cov_40.1519 AUGUSTUS mRNA 17269 18426 . + . ID=g4999.t1;Parent=g4999;Name=g4999.t1 NODE_435_length_23790_cov_40.1519 AUGUSTUS exon 17269 17932 . + . ID=g4999.t1.exon1;Parent=g4999.t1 NODE_435_length_23790_cov_40.1519 AUGUSTUS CDS 17269 17932 . + 0 ID=cds.g4999.t1;Parent=g4999.t1 NODE_435_length_23790_cov_40.1519 AUGUSTUS exon 18245 18426 . + . ID=g4999.t1.exon2;Parent=g4999.t1 NODE_435_length_23790_cov_40.1519 AUGUSTUS CDS 18245 18426 . + 2 ID=cds.g4999.t1;Parent=g4999.t1 #PROT g4999.t1 g4999 MLTCANATGKEVKTIQAALITLLWWAVQQFFQTDVEAILSDSHGKVSTVTFKPGIALFARKDVKILGNVVVTMELKKEPKSLSVDLSRQSGSAGLLSAAAPDGVVGHNSRKKPAVGKDRARWQSTIGWTIVSASRPAILRRFWPAPSRVLYTILMTERRFRLVKWCNDANGVKVGLVGKEYSWLLNDARLAADSENHPALLNHEAIRLRFWGFTAARRRYSVGFKDLTAKDLIELDKIFKALGEVGVVHGDISTVNVLRDTTDKKIFLNDFRTSGGRWWGN* # PASA_UPDATE: g4997.t1, single gene model update, valid-1, status:[pasa:asmbl_7251,status:3], valid-1 NODE_435_length_23790_cov_40.1519 . gene 6348 8538 . - . ID=g4997;Name=g4997.t1 NODE_435_length_23790_cov_40.1519 . mRNA 6348 8538 . - . ID=g4997.t1;Parent=g4997;Name=g4997.t1 NODE_435_length_23790_cov_40.1519 . five_prime_UTR 8414 8538 . - . ID=g4997.t1.utr5p1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . exon 8289 8538 . - . ID=g4997.t1.exon1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . CDS 8289 8413 . - 0 ID=cds.g4997.t1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . exon 8005 8148 . - . ID=g4997.t1.exon2;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . CDS 8005 8148 . - 1 ID=cds.g4997.t1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . exon 7476 7788 . - . ID=g4997.t1.exon3;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . CDS 7476 7788 . - 1 ID=cds.g4997.t1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . exon 6348 7153 . - . ID=g4997.t1.exon4;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . CDS 6545 7153 . - 0 ID=cds.g4997.t1;Parent=g4997.t1 NODE_435_length_23790_cov_40.1519 . three_prime_UTR 6348 6544 . - . ID=g4997.t1.utr3p1;Parent=g4997.t1 #PROT g4997.t1 g4997 MRSPLAQARRLFLLRQFQESIRICRNTIESLDHVKGHAQRCRTGDCGCAPYMSLLIQMYVETGQASTAVPFVLDWYGGLAGIPPKIFVMCVLVMLRHSDRVKTRALVEEWLFFADYAASSSELPTAMPAAVNSTTPIVRLSRDTTPQSTIGDATEGYLRVAEMYVLQILPSLGEFRLAKEFVESNSFIDAHKKQAYISHIHVAEENARSGKTGADFDATRDASPPSPSADRLDATESSTVPQRTSAGAVQSSSVMSAKGLSGVPAGAVAAVARHRTVAEVRALSGRVMARLQKEAQTLGRRLFRHDDQLDSRSVRGSAGAALGGRASAVASDGVGGVRVAGASGAKPLFDFIAFVLVCYAAMRLLWRIPALRGAVAVMGRELRVAVVRAFSRSGGV* # ORIGINAL: g5856.t1 original gene structure, not modified by PASA NODE_4649_length_1374_cov_34.3095 AUGUSTUS gene 258 1082 . - . ID=g5856;Name=g5856.t1 NODE_4649_length_1374_cov_34.3095 AUGUSTUS mRNA 258 1082 . - . ID=g5856.t1;Parent=g5856;Name=g5856.t1 NODE_4649_length_1374_cov_34.3095 AUGUSTUS exon 828 1082 . - . ID=g5856.t1.exon1;Parent=g5856.t1 NODE_4649_length_1374_cov_34.3095 AUGUSTUS CDS 828 1082 . - 0 ID=cds.g5856.t1;Parent=g5856.t1 NODE_4649_length_1374_cov_34.3095 AUGUSTUS exon 258 707 . - . ID=g5856.t1.exon2;Parent=g5856.t1 NODE_4649_length_1374_cov_34.3095 AUGUSTUS CDS 258 707 . - 0 ID=cds.g5856.t1;Parent=g5856.t1 #PROT g5856.t1 g5856 MNSHITLRLLRLCCDHQLFVALNNIEVARQQLRELKTAFVAHASALPLGGESQTANAFTGRHFDEAMSVIDHVALAGILADLAEEMAGSIQSGLLHLMGVDLSGRMGGVRELTEADLGATDAEVQQLVDPVVAYMNEKLELFTEHLYDPVFQRVLERMWVLILETVEAILCPVHDAVLPAGTPPVAPASAGRQAALTHHVDLSGSMRRRLPTGVKKALGAQLTPRQFAMFDKAIK # ORIGINAL: g5672.t1 original gene structure, not modified by PASA NODE_298_length_27677_cov_39.8416 AUGUSTUS gene 18564 26472 . - . ID=g5672;Name=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS mRNA 18564 26472 . - . ID=g5672.t1;Parent=g5672;Name=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 26384 26472 . - . ID=g5672.t1.exon1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 26384 26472 . - 0 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 26129 26253 . - . ID=g5672.t1.exon2;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 26129 26253 . - 1 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 23980 25894 . - . ID=g5672.t1.exon3;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 23980 25894 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 22428 23614 . - . ID=g5672.t1.exon4;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 22428 23614 . - 1 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 22205 22264 . - . ID=g5672.t1.exon5;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 22205 22264 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 21891 21998 . - . ID=g5672.t1.exon6;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 21891 21998 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 21545 21718 . - . ID=g5672.t1.exon7;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 21545 21718 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 21247 21331 . - . ID=g5672.t1.exon8;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 21247 21331 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 20912 21039 . - . ID=g5672.t1.exon9;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 20912 21039 . - 1 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 20574 20678 . - . ID=g5672.t1.exon10;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 20574 20678 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 20095 20307 . - . ID=g5672.t1.exon11;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 20095 20307 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 19642 19742 . - . ID=g5672.t1.exon12;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 19642 19742 . - 2 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 18995 19281 . - . ID=g5672.t1.exon13;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 18995 19281 . - 0 ID=cds.g5672.t1;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 18564 18774 . - . ID=g5672.t1.exon14;Parent=g5672.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 18564 18774 . - 1 ID=cds.g5672.t1;Parent=g5672.t1 #PROT g5672.t1 g5672 MGNQVTVAAGPAFAIDYYLAEFGDFHHEQNLASTRFMKTVRCRHKDAQFVLKLFIKHDPTLSLGRYAQSLEVIAKRLANCTNLLPFQRAIETDKVGCVVRQFMFNNLYDRISTRPFLNCIEKKWIAFQLLHALRQSHERGVCHGDVKTENVLVTTSNTVYLCDFAPFKPAFLPENNPAAFSYFFDTSGRRTCYVAPERFYNPQQSQQQALLDKGLATASAQPASSGAGGANGVGDGGKADIYMDGELSPAMDIFSLGCVIAELFMEGHPLFDLAQLLAYRKGGYDPATMLDRIDDIHVRELVRHMTQIDPSRRLNAHGYLDNWRGLAFPECFYTFLFDFVGSLPTAPEDRIRQLHAELQKTIDTVAPPIVSLSTGFEDQPVTPGATSNGGNSDGDGDDALEGRVTSASTSIDNPLVIVCSLLTSTARGIRLPSTKVAALEILLALAARVGDDVRIERLVPSAMLFLANEAPLVRVWALRTVTRLVKMVRIVPLTDASIFPEYILPALSAFAGDPDVLVRVAYAKNLATLAETALRFLEIGQLRATVALGGSADQAGDSLPYQGGYDDERTAVHDMLHEEVKKALTDQNPAVRRAILGDIARLCIMFGRQKANDVLLSHTITYLNDRDWRLRASFFDSILGVATYIRGKSLERYILPLMVLGLFDGEEFVTERALASLTSMGELGLFQRRTLRDLAKTVAPLLCHPGMWIRYGAVAFFAMVARQVPASDVYCMLRPVLQRFVRYEVADMANEIVLLEALRPPIDRALFRRLCALGSDADKVFTSVRLASPSQQNDSSELPVMASPSMSSTANSVDHNSADEIDSLIASLSAHDEERLLALEEYVMRHTRRAQGPDATTPEEVLAALLAAEKGKLALSTHARGTVHTVDVLADGGDGVSVVGSVSSFDNSYAGGQASGGHAVGGPLGANAVSATAGIMRSSTSSASQLATSGSIRRSGASMRRAESPSVTNDEWRTLFGGSNNNNNNNNNNNVNNSINNSINTSNSISSPSRPVAVPVPATLGSVDELQRVSSVSGLSGLGMSPHSVSPVPSNLAQHPGHVRHESAEEHVTGDLEISRVSAPSPASASLDMRFPPTYSATTQQAQPQSDLARWLDKRRAAVVPIPLPDMGALALPSAADARGTMRSSTSKAPPGNAKTGWRPEGTLVAHFHEHRAAVNRLVVSPDSMFFASASDDGSVKVWDCARLERNVTNRSRITIAKQGGKIKSLCVCEGSHSIASVSDNGSIHINRIDVSGRGGNNGLPAYTRYTPLFSRCLLLEEEGCATDIKHFDSDGQSFLVYSTVRGSIYGWDLRSNSTAWKLKNNPNDGLVESFVVDRAHSHITAGTSQGLMTCWDIRFQLPVQTWQHPDRKILRIVEYPGQYMAPWVLCASGAPIGLAAGGIGTGNEISAWDVERMDCTQRFIAPGVGGRRTRDPSWDVSVAPLQFGKGMSSGAHNNGNPSVAPAEGMRAILCPPDAPFILTAGTDSMIRLWDLTNASNSYVVTGLHDANGVPISGTSYAAQSQSRFGSSVIDNVTIFQETPVQGITQKSVASQGTPRGPSPPSPNHVDAIVDLAYTEVSQKMIVSAGRNGAIKVWK* # ORIGINAL: g5670.t1 original gene structure, not modified by PASA NODE_298_length_27677_cov_39.8416 AUGUSTUS gene 3913 4967 . + . ID=g5670;Name=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS mRNA 3913 4967 . + . ID=g5670.t1;Parent=g5670;Name=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 3913 3937 . + . ID=g5670.t1.exon1;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 3913 3937 . + 0 ID=cds.g5670.t1;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 4073 4164 . + . ID=g5670.t1.exon2;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 4073 4164 . + 2 ID=cds.g5670.t1;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 4305 4483 . + . ID=g5670.t1.exon3;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 4305 4483 . + 0 ID=cds.g5670.t1;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 4684 4765 . + . ID=g5670.t1.exon4;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 4684 4765 . + 1 ID=cds.g5670.t1;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 4929 4967 . + . ID=g5670.t1.exon5;Parent=g5670.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 4929 4967 . + 0 ID=cds.g5670.t1;Parent=g5670.t1 #PROT g5670.t1 g5670 MLNVSDTQKIGAGLTGFGLTFLLLGVLLFFDKGLLAMGNILFVAGVALLIGLERTFGFFFQTRKIRGTACFLGGMVLVLVGWPVVGILVEAFGFINLFGDFFPVAIGFLRRFPVVGNFLNLPVVRMIVDRLAGGKLPV* # ORIGINAL: g5671.t1 original gene structure, not modified by PASA NODE_298_length_27677_cov_39.8416 AUGUSTUS gene 6190 14285 . + . ID=g5671;Name=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS mRNA 6190 14285 . + . ID=g5671.t1;Parent=g5671;Name=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 6190 9316 . + . ID=g5671.t1.exon1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 6190 9316 . + 0 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 9681 10427 . + . ID=g5671.t1.exon2;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 9681 10427 . + 2 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 10746 11029 . + . ID=g5671.t1.exon3;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 10746 11029 . + 2 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 11202 11385 . + . ID=g5671.t1.exon4;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 11202 11385 . + 0 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 11755 11948 . + . ID=g5671.t1.exon5;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 11755 11948 . + 2 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 12141 12422 . + . ID=g5671.t1.exon6;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 12141 12422 . + 0 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 12622 12778 . + . ID=g5671.t1.exon7;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 12622 12778 . + 0 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 12937 13703 . + . ID=g5671.t1.exon8;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 12937 13703 . + 2 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 13865 13949 . + . ID=g5671.t1.exon9;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 13865 13949 . + 0 ID=cds.g5671.t1;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 14131 14285 . + . ID=g5671.t1.exon10;Parent=g5671.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 14131 14285 . + 2 ID=cds.g5671.t1;Parent=g5671.t1 #PROT g5671.t1 g5671 MCTLQDPQLRQPVFRIAGAVPATNYIQIPKSTSQSVGLSGTYLYFQFKTEPPKYFVVHIDTVTIDGLVVRISFSNLFREFKATSTWLQFPFDEPSTPDVHPHSRWTLLVLNLPAIYAEHVTRVYSHVKGIRMCGNLFVRRVFASDIAYNETALPRDVALKPPSNVQWGDAFDCIRFPPPSSAAASGGVGAALISRTRRKGVADRATAKERVRDEDRDKENAVVKDSQMGANARLPSNERGNVDAFDFFAPELDGMLPQRDKRTNLPSRVAAGPLRRRDHTLSPDPIASLSLVSGIGPSCLKALLSPNSDEVVYACRAIIVAQKVENESATTTEDADDLDRIRGQRFFVGHTDAVCAMTIDANGRMLATAQGGVVPCIRLWRFGTGECLLIVATGLFAQPPTDVRLSPEGVRLCAAGKDARDRHLLCVWDVQDTRDDVSVRLVARAKTDADIACVRMQPADVNRLATCGRGSVRFWRLLHANLRPNALRLPRELISESFSDVTYEPGFRPNDPTAPRTAFVGCSTGDVLIVSLPSVTLSRIVRAHAGPIAALVACEAFLATASSGADRTLRIWPLDMSDPYVEANHATDIAAVAVGYDCMTVAVSCMGGLLGIMNVNARTYATAVRCHAKLVTDMRQHPANPALFATASKDERTVRVWSFPGLVQLVEFSSRRDPPCRLAWHPRSTCLLAVGFESGAVRIFNTRRAAQVAVCRQHSAAVASMSFSVDGTRLYTSAGDGLLAMYECVFTGIRSVPQQQDAPMTEGSQSQPPDAAFVESAELHPSSLLVCSTLSPRLAVSDEGGWVAFFAPDVEPGRPPTRTAAWLVIVDGRNMREVARMSLDRIASRGALVDLTFVNDSQEIAVLNENWDMGLLDSRTAEWVGAVYPLFRPHDGPPPEGKATAMAAAPYRNIVAVVGEDRLMRIASTKPPGAATQSFVGMGSPVTAVAFADGGRRVVAGGEAIFLWDVHADPDDEGDNGAGGVASGFEGVGGLANAHPVHSSSPARQIHAPPLEERPERVNGSVDEDDANHVGEIGERSALTMEDIGSSPAMPNRRSASPTKDGPARPTTHTHTHNTHVHNRHDHHVHGDLHVPVPSVPPSPHARPSMVLPGRLTPTSARLNSSQSPAKALAHSRQPRVAHHFVPRMDAPPLALRRYTVAESDDAGLKLAIAVGNNAMRSPQPIAWDSMSGVFVWSVGSIAVLENLSTRKQTHVTTHTAEVSAVALCPGGRTMATAFGPSPTSGAGKVCLWDLTTGDFPANVSQPRLIAALSYHDNCVTALAFSVDATRLVSVGNYSDPSVALWDAREGRFVGAHHPGRPIHAVCWCPPTPTDLDTSDDAIDSDGTRVGVALLVAVGERSILFVSADERHDGGDGPVDANEMARLQLKVMRADIPAEVTAPHFTAVCFGPYEGHATRSLFVGGSDGSVTRWDVRSRCCTSAWSADSSELGAMHAFFRSHVASADAVLWAHRRLITGGQSTCLRRWTASDALNVESEIDIDGPVVSLQTDLMGEMGIVASASGTLWYVDFGENTTIRLSSSHTGRITGADMSFDGRHMVTCAEDGSVRVWAVGRPDDDSTANGAIQRETSNASLMNAVEQIVHFQAVGQPATCTCAFPAGDRCAAGYGDGAVRVFSVQRIALETKFVAHSTSVTAIAVDAGGRFIISGSAAGIVVISSTATGITLRSISDHRGAPIACIRFERPLVTSNCQHGGNDGGGSEDDVDGSASDVSVQTDWRSSRMVTVVSDGRTSAGQPSTRQFQAPEGKAEGVIDAHNTPKRRYPKVPRVAPSTERFVVTSNDRRLSLWRCEWLHDECALEEWLTFPGPQTAGDGAQPQPEAQSHSPKIPRQAWASSTSAAARSPSNIPTANANANEEETAACCFPSLACFCPSDPNLLVYTGFGFQKELILYDLRLKKIRKTIPLVYWATSLDCSPDGSLIALGCKERLVKIVDPAEGTFQDYVGHSDAVSVVRFDAAGNRLLTAAYNALLIWDVAF* # ORIGINAL: g5669.t1 original gene structure, not modified by PASA NODE_298_length_27677_cov_39.8416 AUGUSTUS gene 1778 2474 . - . ID=g5669;Name=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS mRNA 1778 2474 . - . ID=g5669.t1;Parent=g5669;Name=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 2317 2474 . - . ID=g5669.t1.exon1;Parent=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 2317 2474 . - 0 ID=cds.g5669.t1;Parent=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 2074 2145 . - . ID=g5669.t1.exon2;Parent=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 2074 2145 . - 1 ID=cds.g5669.t1;Parent=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS exon 1778 1865 . - . ID=g5669.t1.exon3;Parent=g5669.t1 NODE_298_length_27677_cov_39.8416 AUGUSTUS CDS 1778 1865 . - 1 ID=cds.g5669.t1;Parent=g5669.t1 #PROT g5669.t1 g5669 MTQTVCNVFFWVLLVCTLSLHPADAISCPPYCTCSTIGVTSCSFTNPTTFTTLDWTGRQISTLASGIFDSLTNLQTLILDKNNIASFPDTNLLAKLVNLLGLWVF* # PASA_UPDATE: g7015.t1, single gene model update, valid-1, status:[pasa:asmbl_6513,status:12], valid-1 NODE_3767_length_2792_cov_70.4553 . gene 1850 2792 . + . ID=g7015;Name=g7015.t1 NODE_3767_length_2792_cov_70.4553 . mRNA 1850 2792 . + . ID=g7015.t1;Parent=g7015;Name=g7015.t1 NODE_3767_length_2792_cov_70.4553 . five_prime_UTR 1850 1975 . + . ID=g7015.t1.utr5p1;Parent=g7015.t1 NODE_3767_length_2792_cov_70.4553 . exon 1850 2032 . + . ID=g7015.t1.exon1;Parent=g7015.t1 NODE_3767_length_2792_cov_70.4553 . CDS 1976 2032 . + 0 ID=cds.g7015.t1;Parent=g7015.t1 NODE_3767_length_2792_cov_70.4553 . exon 2145 2792 . + . ID=g7015.t1.exon2;Parent=g7015.t1 NODE_3767_length_2792_cov_70.4553 . CDS 2145 2792 . + 0 ID=cds.g7015.t1;Parent=g7015.t1;3_prime_partial=true #PROT g7015.t1 g7015 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG # PASA_UPDATE: g7014.t1, single gene model update, valid-1, status:[pasa:asmbl_6511,status:12], valid-1 NODE_3767_length_2792_cov_70.4553 . gene 1 952 . - . ID=g7014;Name=g7014.t1 NODE_3767_length_2792_cov_70.4553 . mRNA 1 952 . - . ID=g7014.t1;Parent=g7014;Name=g7014.t1 NODE_3767_length_2792_cov_70.4553 . five_prime_UTR 836 952 . - . ID=g7014.t1.utr5p1;Parent=g7014.t1 NODE_3767_length_2792_cov_70.4553 . exon 779 952 . - . ID=g7014.t1.exon1;Parent=g7014.t1 NODE_3767_length_2792_cov_70.4553 . CDS 779 835 . - 0 ID=cds.g7014.t1;Parent=g7014.t1 NODE_3767_length_2792_cov_70.4553 . exon 1 648 . - . ID=g7014.t1.exon2;Parent=g7014.t1 NODE_3767_length_2792_cov_70.4553 . CDS 1 648 . - 0 ID=cds.g7014.t1;Parent=g7014.t1;3_prime_partial=true #PROT g7014.t1 g7014 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG # PASA_UPDATE: g13173.t1, single gene model update, valid-1, status:[pasa:asmbl_7473,status:3], valid-1 NODE_460_length_23320_cov_39.1433 . gene 10008 12375 . - . ID=g13173;Name=g13173.t1 NODE_460_length_23320_cov_39.1433 . mRNA 10008 12375 . - . ID=g13173.t1;Parent=g13173;Name=g13173.t1 NODE_460_length_23320_cov_39.1433 . five_prime_UTR 12340 12375 . - . ID=g13173.t1.utr5p1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . exon 11962 12375 . - . ID=g13173.t1.exon1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . CDS 11962 12339 . - 0 ID=cds.g13173.t1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . exon 11662 11804 . - . ID=g13173.t1.exon2;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . CDS 11662 11804 . - 0 ID=cds.g13173.t1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . exon 11076 11363 . - . ID=g13173.t1.exon3;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . CDS 11076 11363 . - 1 ID=cds.g13173.t1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . exon 10008 10800 . - . ID=g13173.t1.exon4;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . CDS 10254 10800 . - 1 ID=cds.g13173.t1;Parent=g13173.t1 NODE_460_length_23320_cov_39.1433 . three_prime_UTR 10008 10253 . - . ID=g13173.t1.utr3p1;Parent=g13173.t1 #PROT g13173.t1 g13173 MEFSLHELVGLGVTSALAIVLYLWKESFVPRAGTWIEELSGQVISCIFLFYLVLCAYFQEYKRRVGGSWWRFDRAAYLFGSWLFSAKRQPPNADEVHCSDVRYYAMRYGYCLEEHDVLTDDGFILQVFRVYRAEAKDRAATFKPVLIQHGLFQSAGIFVSNQEDSITFYLADQGFDVWLGNNRGVVPKHQALHAGERQFWDWSLDELGKYDFPALVHFVCAQSQHEKCTYIGHSQGNAQAFLGLSHDPAIGNKINLFVALAPAYLVGPVNHWALQYMVNQPRDAFVRFFGTKAFIPIMNVVQDYAPAWFFESLAYNMFHYLFNWGDSLWHSHNKPKYFQFTPKPTSVKLIMQWAENLRVGRLCPFGETEAYNPHNITCPVALFYGKRDTLVHGARLEAELREKGKVNLVHAEGVELYEHMDLIWAADAREKVWVKINGLLAETHAVRAPSA* # ORIGINAL: g13174.t1 original gene structure, not modified by PASA NODE_460_length_23320_cov_39.1433 AUGUSTUS gene 12891 13256 . - . ID=g13174;Name=g13174.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS mRNA 12891 13256 . - . ID=g13174.t1;Parent=g13174;Name=g13174.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 12891 13256 . - . ID=g13174.t1.exon1;Parent=g13174.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 12891 13256 . - 0 ID=cds.g13174.t1;Parent=g13174.t1 #PROT g13174.t1 g13174 MPPPSAGRLPASDSAVIKSASRKRRGGTRSAADVATPYPYRFPSFATRELAEASRPAGDRNPDWFSTTTAICLKTAPASSDRVAAAAEARLSGGEFGRPARPLGLSWLHRAPPVAIIGSSV* # ORIGINAL: g13172.t1 original gene structure, not modified by PASA NODE_460_length_23320_cov_39.1433 AUGUSTUS gene 3207 8601 . - . ID=g13172;Name=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS mRNA 3207 8601 . - . ID=g13172.t1;Parent=g13172;Name=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 7696 8601 . - . ID=g13172.t1.exon1;Parent=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 7696 8601 . - 0 ID=cds.g13172.t1;Parent=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 7375 7398 . - . ID=g13172.t1.exon2;Parent=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 7375 7398 . - 0 ID=cds.g13172.t1;Parent=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 3207 7085 . - . ID=g13172.t1.exon3;Parent=g13172.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 3207 7085 . - 0 ID=cds.g13172.t1;Parent=g13172.t1 #PROT g13172.t1 g13172 MGSTRLLARASWAVVVVVVAALLVAMPADAQFKMNFRIENNKMWQRSGNTWTEFGFISGMNLGASKPGHDPGELPLTQEDYLRYFNYVATLGSNVIRIYTTLPPSFYDAVKKYNTVLSPASPMYVIHGVWSPDEEMSGADGWGADAFDDVIFSKMKVFIENCVKAAHGDGLVEYAKDTMGRYTTDISPWIVGWLMGTEWEPFMVNKTNVNKYPGAPYQGRWVTCVPAANTFENWLCIMLDYLCTLNGNYGWMFPMTFSNWVTTDPIPHPLEPQPDISYEDWMIVDAKHIVLSAQWTAGYWVTEHLYCYYPDFLRYSLADYNYPKSETGQSTDDPFEWYLIEYRRYYADYLVVISETGFPTSLGTAHYGYKNRDHGHVREDQQGIMLVETMDMMLLHGYEGVIVFELTDEWFKRSWNTIKWDLNRKAWHNCLSSEQYFGLVAVEPRWDVDIDGSTEDWDRLNLPNMAGTLPGMKRIQMTYDAAYVYILAEKFVPWKNEDQLWMGVDSVPLEGAFFADVMQTIRFDNPIEYLVGLGPTGVAAYSNDAMSWWLRRYAERVRLLDDASILENSARGRFHLFEIITKVPTEVPRRGFPMEPYYFPHTLFTAGQLVQGNTKVTSPDYNNLAGWQVQGSVIEARIPWGMLGFSDPSVRQVYTFQGKSNLTRTVSTLTNGMGLEMWFNGVKLAAQGFKWSTWSEPCFCERYKVGAHNVSTALFRYRGLANPRDSLPTGQLHCECRPSTSDSLKAAQKYLIIASFVAVMAMLVYIGVLRPGFAKVLYCYSVKSRRRNGNNAGLGSLQAIAFVILATICLAIFIRSRQDGISPITLIVDFADNVESERATVSNVYIYFLMYMVLQNWDAFLLLCMSLIVPWKIKKDVKTTTPSPTPVQPKLPSGSGAQAIASAATTLRRRTSEAVEIGPAGDNSLSAGAGTEKGSHAFIIACHNSSRKIVATVENILKKSEPWQVFVADNGSSVAEIESTERACRDLTLRYMQQHPNYSGPPVSFGTLPEGNKTVAQFATAYNLRNFSRRIDYVTMIDDDTIVPEAWSQEEVLKYFEDPSVKCLAYPLCAMNRSYALAQFQNMEYLLSGFFKIVQAHFGTTLFASGAFNTWRTEIIVDILYRHDTMHHGDDLQQGLILHALAGRPWIMEPSKVHTAGYKVDCASTIIVGTDVPICWIHARDILPRSLANKMGLKPCDCGEPSLFLQRGKGWDVSRHRFLWKYAKMIFHRPSVTCWRGVWARIVALHDMGLILNDWAFVIYGIITLVFYKNYVVFLKGIMLAWAFQILVFWVFNFKVLRPIGRSIAPETRVLFPVIYKLPVLLFLRVYGMLYNILYYLPFVRNKDRVVRRLEHTDGFQVMVDNAYGRPHNSLDLSGTSKKMDDPYDISTIAIELGPDGFPVDPNALKDRVTVLCSEAARLQKELLYASNLYMKMTSGITPGTSISSQYVATKTGLQSIAEVRDDSPRRGSTRSVARTPSATNGHAHAYAHVVHSGTNGSVSVNVAGDGLRLTRTGSAAVAAQAQAQAQAQAQAQAQGNGNGKGNFEAKVAAAGVGQGDTAVHPQPQQQQQQQQQQQQQQQREAPPLPSRNARANKPAIAPRKL* # PASA_UPDATE: g13171.t1, single gene model update, valid-1, status:[pasa:asmbl_7472,status:12], valid-1 NODE_460_length_23320_cov_39.1433 . gene 156 1964 . - . ID=g13171;Name=g13171.t1 NODE_460_length_23320_cov_39.1433 . mRNA 156 1964 . - . ID=g13171.t1;Parent=g13171;Name=g13171.t1 NODE_460_length_23320_cov_39.1433 . five_prime_UTR 1877 1964 . - . ID=g13171.t1.utr5p1;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . exon 1349 1964 . - . ID=g13171.t1.exon1;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . CDS 1349 1876 . - 0 ID=cds.g13171.t1;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . exon 546 994 . - . ID=g13171.t1.exon2;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . CDS 546 994 . - 0 ID=cds.g13171.t1;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . exon 156 316 . - . ID=g13171.t1.exon3;Parent=g13171.t1 NODE_460_length_23320_cov_39.1433 . CDS 156 316 . - 1 ID=cds.g13171.t1;Parent=g13171.t1;3_prime_partial=true #PROT g13171.t1 g13171 MMSASLCAARLAGAVRTGQRMANQAAMCKCVRHRQAATPPPFVSPDSRIVVCRRWSTSKSNTEQNASSSQQTATATATGTATAKTTHASPKESPSSQRDGGITGVVVGADGGSGVGHADAKGELGAVRPKRVYGSGSPLYAPNPTEYFSNALANVERPQLSHMHDAIETYAKNQYKVGSLDFIRTTLDVCDRHGISLDLRAYNGIFDTLPKGRYIRSPKDIMRRKLNDFEKTTLDVLGRMETEGVCPDLLTYDHLFTVFDWGGPVIMKCLRLMYWFDRFGKGHRNRLYLPLPKDRLALAKISLMRMHGKGCVLREHTDDERVGHDSPFVASGSTPADEGLLRECVAAGHSVTVDGPHLNWIGRHNQPYYALAVPSTGGP # ORIGINAL: g13176.t1 original gene structure, not modified by PASA NODE_460_length_23320_cov_39.1433 AUGUSTUS gene 17199 19402 . + . ID=g13176;Name=g13176.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS mRNA 17199 19402 . + . ID=g13176.t1;Parent=g13176;Name=g13176.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 17199 18089 . + . ID=g13176.t1.exon1;Parent=g13176.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 17199 18089 . + 0 ID=cds.g13176.t1;Parent=g13176.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 18335 19402 . + . ID=g13176.t1.exon2;Parent=g13176.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 18335 19402 . + 0 ID=cds.g13176.t1;Parent=g13176.t1 #PROT g13176.t1 g13176 MDASTREPVPPPLPPEGASPAHVDARGPKEDGHIVSHGQKQSESSAMRRHEQGLLRPMQTHSAAARHSRSMKPADKGDAVGSGVHGDRYNAHLTWRPFDAAMHTQPDGPLEAHGAQAVSPAPLYAAKQYQYAGHPSGLLPSSQWQYGGPSRRGSTGEFSASAEVMPSTYGHDTQGAIPPTYSPGDHMPYLYGRSHVHSPYSHGGPFSQGSMGGVLPSSAPYYLRDAGAGVVPGALRGGLPPPTSALMGSGAGSSMHRDPGVGLVDSIHLHEAYADALARLENASMYAAQLEDQIDMLAQCMSNCKCGAANGRRLAVGDGPDRGYARTMPPDYVNMNWPQHHAHHIPPPPSSYGGGASHVGHAVHAHSEKHGDHGGLPLPAAHVTHHHVSAAATAAPLLPVAAADIPPDSARARVVAARGDGQAAPASTPSAVPAAAAVAGVATTTAIPPAPQSASQQSVPLAATARDAPALERQERDRRGRPLLPLSAALAGGVMAIGDIRTGLITLPRSKRYRRTFAELDQSHMRRFRCTVGTCGRMYALENSLKQHMKNKHNIATDDTPFGTRPLSSDKASASALSSPDGLTSVEDCAAGTAGHMKNASAGPGRRRGAMPAADADPSESADSSCDGSGETADERLRASKRARVSSPILKK* # ORIGINAL: g13177.t1 original gene structure, not modified by PASA NODE_460_length_23320_cov_39.1433 AUGUSTUS gene 20943 23231 . + . ID=g13177;Name=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS mRNA 20943 23231 . + . ID=g13177.t1;Parent=g13177;Name=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 20943 21458 . + . ID=g13177.t1.exon1;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 20943 21458 . + 0 ID=cds.g13177.t1;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 22331 22367 . + . ID=g13177.t1.exon2;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 22331 22367 . + 0 ID=cds.g13177.t1;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 22651 22740 . + . ID=g13177.t1.exon3;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 22651 22740 . + 2 ID=cds.g13177.t1;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 23043 23156 . + . ID=g13177.t1.exon4;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 23043 23156 . + 2 ID=cds.g13177.t1;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 23215 23231 . + . ID=g13177.t1.exon5;Parent=g13177.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 23215 23231 . + 2 ID=cds.g13177.t1;Parent=g13177.t1 #PROT g13177.t1 g13177 MDDSDSEYASCVENLSDDDDDSCIPIPIVNTAVLDDVSPSPNVVVSKGDVSNNLLQSDASTNSVVESEPAVCVLESAKESEVSAAENEATVAESTECDVVRTIGDGDMSAAVPHTTVEASAFAGAAALSEPALDAASGAGFDDSNSGEMEHADPEPAPVEASAVFLSEDEIKDAFELVVDDCTTALDLDPSYVKARVRRGHAYEKLDKLEEALADFNLVLEADPGNYVARDATRRLPPLITEKQEKLKAEMIGAFSA* # ORIGINAL: g13175.t1 original gene structure, not modified by PASA NODE_460_length_23320_cov_39.1433 AUGUSTUS gene 14531 14962 . - . ID=g13175;Name=g13175.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS mRNA 14531 14962 . - . ID=g13175.t1;Parent=g13175;Name=g13175.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS exon 14531 14962 . - . ID=g13175.t1.exon1;Parent=g13175.t1 NODE_460_length_23320_cov_39.1433 AUGUSTUS CDS 14531 14962 . - 0 ID=cds.g13175.t1;Parent=g13175.t1 #PROT g13175.t1 g13175 MLVVALAQRLGRVGMEFVARESSADRRALHTRTGTAVPQAVPHVRRLERGWASRSVTPGMSIVVAESGAMATAQKFTFGSRTAPPTSLSCGPAVTADGTAPGPYSCGLGGCRRCRNDSRQHKSMTGWSVNVPIELATGVRLCG* # ORIGINAL: g34.t1 original gene structure, not modified by PASA NODE_3180_length_4088_cov_41.4742 AUGUSTUS gene 941 2470 . - . ID=g34;Name=g34.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS mRNA 941 2470 . - . ID=g34.t1;Parent=g34;Name=g34.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS exon 941 2470 . - . ID=g34.t1.exon1;Parent=g34.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS CDS 941 2470 . - 0 ID=cds.g34.t1;Parent=g34.t1 #PROT g34.t1 g34 MADGEPPFKRPRSELAPNLPTAQAINAAIEAGRKAGNINVGGGDAMPLSDGSKRAAAEHDEVLADFERRRRARTMAVPTDPAAVKLKLREYGEPVTLFGEGPAERRERLRETMSVREGITVEKDDAVASGAGALEKTDSAMPSQSVWYHEGPDALRDMRAWIASASLPRAKERLRAARVARSHHDPARLAATADLHRQLRTASNSASQIGDDRPLSHCAFSPDGHLLATASWSGLCKLWSVPDCRPVRTLRGHNERVGAIVFHPQAGTTQHSASLLNMLSCAADGTVCMWDLQGDTPIARLDPAIHGHQRVARVAFHPTGRLFGTACYDKTWRLFDAETRQELLVQEGHSRAVHAIAFQGDGSLVATGGLDAVGRLWDLRTGKCIMLLAGHVKSVFAVDFAPDAYRIATGSEDHTVRIWDVRKRSSVYTIGAHTNLVSFVKFQPGEQGGHCLVTAGYDNTARVWTHPGWVALRTLAGHENKVMCVDVTGDGRTIATASYDRTFKLWAPE* # ORIGINAL: g35.t1 original gene structure, not modified by PASA NODE_3180_length_4088_cov_41.4742 AUGUSTUS gene 3071 3840 . + . ID=g35;Name=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS mRNA 3071 3840 . + . ID=g35.t1;Parent=g35;Name=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS exon 3071 3097 . + . ID=g35.t1.exon1;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS CDS 3071 3097 . + 0 ID=cds.g35.t1;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS exon 3183 3404 . + . ID=g35.t1.exon2;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS CDS 3183 3404 . + 0 ID=cds.g35.t1;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS exon 3506 3592 . + . ID=g35.t1.exon3;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS CDS 3506 3592 . + 0 ID=cds.g35.t1;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS exon 3694 3840 . + . ID=g35.t1.exon4;Parent=g35.t1 NODE_3180_length_4088_cov_41.4742 AUGUSTUS CDS 3694 3840 . + 0 ID=cds.g35.t1;Parent=g35.t1 #PROT g35.t1 g35 MDNQSDLEKIRNKRLNKLAQPRAASPEAPAPVSPSAGPGGYAVAPQLSTPSTPSSASRVASASALSPPEHRPLRAGGTGEAELIRPVTPDRPANIPQLEHDILCKIMRVTLQPSQESNERVFLAGIVSEYSEIQGTPPLSACVFACNGVDCSTHPPLAAT* # PASA_UPDATE: g33.t1, single gene model update, valid-1, status:[pasa:asmbl_5678,status:12], valid-1 NODE_3180_length_4088_cov_41.4742 . gene 278 623 . - . ID=g33;Name=g33.t1 NODE_3180_length_4088_cov_41.4742 . mRNA 278 623 . - . ID=g33.t1;Parent=g33;Name=g33.t1 NODE_3180_length_4088_cov_41.4742 . five_prime_UTR 593 623 . - . ID=g33.t1.utr5p1;Parent=g33.t1 NODE_3180_length_4088_cov_41.4742 . exon 278 623 . - . ID=g33.t1.exon1;Parent=g33.t1 NODE_3180_length_4088_cov_41.4742 . CDS 278 592 . - 0 ID=cds.g33.t1;Parent=g33.t1;3_prime_partial=true #PROT g33.t1 g33 MAEGTPLASGDDALEFMQTFRRYKGCSTPIDYTSIVDFAAGSTGETDSRVFRVNIGGNGVGGAAAARQLPVLGCDEPHFSSSVPPMSPELDPRFWRAFGLQDAPG # PASA_UPDATE: g8576.t1, single gene model update, valid-1, status:[pasa:asmbl_8485,status:3], valid-1 NODE_612_length_20229_cov_59.5855 . gene 15799 20094 . - . ID=g8576;Name=g8576.t1 NODE_612_length_20229_cov_59.5855 . mRNA 15799 20094 . - . ID=g8576.t1;Parent=g8576;Name=g8576.t1 NODE_612_length_20229_cov_59.5855 . five_prime_UTR 19928 20094 . - . ID=g8576.t1.utr5p1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . exon 18957 20094 . - . ID=g8576.t1.exon1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . CDS 18957 19927 . - 0 ID=cds.g8576.t1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . exon 18421 18764 . - . ID=g8576.t1.exon2;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . CDS 18421 18764 . - 1 ID=cds.g8576.t1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . exon 18123 18246 . - . ID=g8576.t1.exon3;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . CDS 18123 18246 . - 2 ID=cds.g8576.t1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . exon 16446 17998 . - . ID=g8576.t1.exon4;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . CDS 16446 17998 . - 1 ID=cds.g8576.t1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . exon 15799 16256 . - . ID=g8576.t1.exon5;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . CDS 16096 16256 . - 2 ID=cds.g8576.t1;Parent=g8576.t1 NODE_612_length_20229_cov_59.5855 . three_prime_UTR 15799 16095 . - . ID=g8576.t1.utr3p1;Parent=g8576.t1 #PROT g8576.t1 g8576 MGADAVKMRVRRLHLELCASLFALALCVVAVSLPIGVSSLKGDYFNGISSHPPNTIRVEGTMAMSPVDSTYEGIDAARAYTFWAERLNRMGGITVNGTPMNVSVVIRDDAFDGAFIAATYAGYCARSNATRPHYLLLPYDAISGVAAMQARCPIPSFSIGFMPETVLMSSAAASFPLYHMGAPRERGFVLLNSFFDSLIRAPRLALVLKEDDPFSTILANTTIAFINGSQTQLVGVRSYADSSTKLSHFLKLLDLVSSLKTLDPDIVVYYGLFSDMVTVMEAAKLTNFKPKTIITTVLYPTKDIVNVGENWMVMSAYNPLANYGTSGVGLGTTAEQCAAFLAAYPVSYDCQTLSAVMTATEAFRAAVLAADSLAPAAIHQSMHTINLTTSAGPFVLNAIGQNLGRSFRISQLRNGSLVPIKSENPADPTVAAVFPLPREPDVPGVPKSTVLSNGIMLSYGVANKGSANDTKYEVQATNDRIATFTTVYNGTASAVLLTNLIGGVTYRFRVRAYSSAGSSEYSAEVTTAYAAGSSTKDLTVKIAVPIGVVAGFFIVVAAVSVAYARRIAHTKVNATLSTLDLDGPVAKAMKVIEGIRQNRLKGGAMLTELKIVEEALIANNMYQPVLDASSANNNIGLETVQFLDNLLLTRLMPEKRAKHGNLSRRPSTLRDQSFGSMTASGNESFAGRGLNGRTDNVHEAKEVTVALDNIHRWDFNIFTLEAATMGHPLCALAFEVMWKLGLIEAFAIDDGQLKRFLLAMESGYMNHDAVYHTSTHAADVLHAMFVFFQQERFRNLFTPREMLAACLACVGHDLDHPGVTNSFLIGTGHDLALLYNDTSVLENHHSASFFKVLQDPDANILRNLDAIDLKAVRKLVCTLILATDVAQHFEHLAKFKTRVSSGLLSLDADADRTLVLVMAIKCADVSNPTKPKSLYDPWTARIMEEFYRQGDRERDMGMPVSMFMDRQNKNIGKCQNGFIEVIVSPLFKSFTEFLGFEEPQNNVERNHQFWKRQLELQAGSEIDFRRPLASGGPKLSDGIGHKLSNGSSNA* # ORIGINAL: g8573.t1 original gene structure, not modified by PASA NODE_612_length_20229_cov_59.5855 AUGUSTUS gene 7085 8572 . - . ID=g8573;Name=g8573.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS mRNA 7085 8572 . - . ID=g8573.t1;Parent=g8573;Name=g8573.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 7085 8572 . - . ID=g8573.t1.exon1;Parent=g8573.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 7085 8572 . - 0 ID=cds.g8573.t1;Parent=g8573.t1 #PROT g8573.t1 g8573 MQARSHPSNISSAGVGLNVRTMPAVPSSPNLSLLAGLDPTAEALRKVQRSQLLDLHTRGVNESKGVVGSARSWDHIENLDELLTKYDNAANTTDPDESSNWLSVLQQACVDGHDDCVKLLIQRGADVNYISKNGLTAAAFAAKYGHVACLMELKAAGADLDLRGASDVSLAPLACAASNGKDKCVQFLIASKANVVEDDYRYNPLLLAAKTKGNHRCAELLLQAASSLANISDAHGNTALIVAARRGDIDLVRSIVEQVTTLEGTDPAVINHANDAGDTALRVAKMAGSRGQGPTVVAYLLEKGAKDSMTGNAVISEFEFVDESEWDSIEAELGAMMERVRSLNDRVSKAMIQRDRRGTMGGRTSLAGMTGSFGHMNRPSLSLGRQSISIPGTTSVPSSRGSFAMPSPGFVAGQSSRSSVSLVQTPGQARNSVSFGSTGGPPVQSSRASVSFGGSGGTPGASTKPSVSFGAANISGAGTAAATTVAATASTRTGR* # ORIGINAL: g8572.t1 original gene structure, not modified by PASA NODE_612_length_20229_cov_59.5855 AUGUSTUS gene 965 6811 . + . ID=g8572;Name=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS mRNA 965 6811 . + . ID=g8572.t1;Parent=g8572;Name=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 965 1270 . + . ID=g8572.t1.exon1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 965 1270 . + 0 ID=cds.g8572.t1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 1361 1630 . + . ID=g8572.t1.exon2;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 1361 1630 . + 0 ID=cds.g8572.t1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 1742 1928 . + . ID=g8572.t1.exon3;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 1742 1928 . + 0 ID=cds.g8572.t1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 2202 2398 . + . ID=g8572.t1.exon4;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 2202 2398 . + 2 ID=cds.g8572.t1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 2515 6574 . + . ID=g8572.t1.exon5;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 2515 6574 . + 0 ID=cds.g8572.t1;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS exon 6750 6811 . + . ID=g8572.t1.exon6;Parent=g8572.t1 NODE_612_length_20229_cov_59.5855 AUGUSTUS CDS 6750 6811 . + 2 ID=cds.g8572.t1;Parent=g8572.t1 #PROT g8572.t1 g8572 MYKAQKAVFMMDPTTARHGRVPVIRPSSAMSVASTASASSAPGVREGRSTPSFARGNAPDISSFKRYMTPEYLSSIVSKEDPATLTVLNLSVRAGANEPKIEKIENLDKFKSIEKLNLSGNVIRTIENLDTLVRLRELNLENNQIHSLDGIDKLVRLTELNVAGNQLRHLPPALGKLHSLKVLRLARNEIGELCELDALKEVAKLANMTLGGNPVSLLPDCRLYAVFVSRSLQVLDGTQVTVTERAEADQRFKLDDELARLREENRRLVAVSEGLQSDAKKSKLEADTLQREVQRTSGRIVELQGKLAEAQSKLSKEHVTFDSTSAELAAAHRKCSELEQELTFYKLDFAFADDADDDDSRLKTGDGDEVNTESVDDSPYIGKGNFSIPGGRQPRSKSQRMHTGPLTRDVHGNTLTWDDIARIEMRLNELRQHAGLLDEHIADRREQAAAGAETAAELDAQIQALLDLEAIATPDDRERVAGKREMVQQQLDEVLQSLADLDADATASAMERDAIAMEISEIASSCDVDRSHPMYRAIITPLVEAYTEIEQLRTRCAELEQELESSRDHEAELEAEASRRAAVQADLETLQGQHDEILTRVVTTQSDLEAVQTQTNEAHAAKDAAIEEVNALTDSIASLSAAREALAKETRVLEDKVHALKEAVGYLQADSAEIERLRARAGGLENELESARQQVHALNSEIVQQAAVRADLDALQRQHEDMLMRCERAKGDLEAIRAQADMARAAKDAAREASMTEIDGLNNNIASLSATREALSRETRIIEEQMHAMKDAVGYLQADTTEITRLRARAAGLENELESARQQVHALNSEIAQQAAVRADLEALQRRHEDVLAQCERAKDDLEAFRAQAEAERAAKDAALEKAQELRADLETLSATNEALSEDVRRVGQQLQVVQGTAGGLKVDAAEIEWLRTRAAGLENELESARQQVHALNFEIKRRAAAQADLDALQKQHEDMLAQCERAKGDLEAARAQVNVLWASKETIIKETMSLTSTRDSLLEDTRRIEAQLRVAQGFRVQALADAERDAASWIQKARESEQSALDEVRKTLQSLRSDVAAFENLLTSLRGQVDEAEAKRLALRHAADAERDSLARLQAVKEEAERTLGSLQADIASAKAARESASVAAAVLESQRDAVSRIRVARESEQLALDEVIAACNDLSAKRARLTDDIASLERRRNETADALSVDQAKHQSLCSDVAALEGVLGDLRVRVDEAEAKSAALRHVADAERDSLARLHASKEESERRLASLQSEIASATAARDSASAAVTSLLAQRDALAAEITAAEDAWGSLEERDGDIHAAQNAAQRAEGRAEFLERELSGKRRDEAKVTELLHTTMAQLEHVSMTLEEERKELARQSATATKAHATLAEANHRLEALREADGREIDQLTRLLFEQREQSAELSSRVSELKIENAHLRSELTVAEMSRNKTAPSASRSAVTAALAPASSKGATADAGDRGAAHKQRTAEYERSVARLKEELAELERRRKAVLSELDGPGGYGDIAAEVRRLRDRRGRHVEVMIVDKQEHMALRHECAAVRDILRRQEDALSSLSERARASTAGGASLATDRTGEQYSFRRPPPAIDYAFVSAEKESLRDRVRRIERTGAATAAGLGSLDYAPSASTAQGYKAPSSAHASRRVHSDVYGRSSDVSNAHDASARRIHSDGMSY* # PASA_UPDATE: g8575.t1, single gene model update, valid-1, status:[pasa:asmbl_8483,status:3], valid-1 # PASA_UPDATE: g8575.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8482,status:12], valid-1 NODE_612_length_20229_cov_59.5855 . gene 11903 15186 . + . ID=g8575;Name=g8575.t1 NODE_612_length_20229_cov_59.5855 . mRNA 11903 15186 . + . ID=g8575.t1;Parent=g8575;Name=g8575.t1 NODE_612_length_20229_cov_59.5855 . five_prime_UTR 11903 12009 . + . ID=g8575.t1.utr5p1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . exon 11903 12318 . + . ID=g8575.t1.exon1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . CDS 12010 12318 . + 0 ID=cds.g8575.t1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . exon 12610 13955 . + . ID=g8575.t1.exon2;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . CDS 12610 13955 . + 0 ID=cds.g8575.t1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . exon 14126 14342 . + . ID=g8575.t1.exon3;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . CDS 14126 14342 . + 1 ID=cds.g8575.t1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . exon 14528 15186 . + . ID=g8575.t1.exon4;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . CDS 14528 15040 . + 0 ID=cds.g8575.t1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . three_prime_UTR 15041 15186 . + . ID=g8575.t1.utr3p1;Parent=g8575.t1 NODE_612_length_20229_cov_59.5855 . mRNA 11903 14480 . + . ID=g8575.t1.1.5b6be70c;Parent=g8575;Name=g8575.t1 NODE_612_length_20229_cov_59.5855 . five_prime_UTR 11903 12009 . + . ID=g8575.t1.1.5b6be70c.utr5p1;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . exon 11903 12318 . + . ID=g8575.t1.1.5b6be70c.exon1;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . CDS 12010 12318 . + 0 ID=cds.g8575.t1.1.5b6be70c;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . exon 12610 13955 . + . ID=g8575.t1.1.5b6be70c.exon2;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . CDS 12610 13955 . + 0 ID=cds.g8575.t1.1.5b6be70c;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . exon 14126 14480 . + . ID=g8575.t1.1.5b6be70c.exon3;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . CDS 14126 14471 . + 1 ID=cds.g8575.t1.1.5b6be70c;Parent=g8575.t1.1.5b6be70c NODE_612_length_20229_cov_59.5855 . three_prime_UTR 14472 14480 . + . ID=g8575.t1.1.5b6be70c.utr3p1;Parent=g8575.t1.1.5b6be70c #PROT g8575.t1 g8575 MTPRIASPFMGNCIHLYAGALLPLLSAFAAGASATVRTYAASSSPDEDNDDNHALLYFIAGLVSTVVCAGTVSLFVLYPDLRKHPGQIILFRSLCDITFNLCQVFSYVAGEPGPDDASCLWLGVVNQFSAFASNAWYFALSLDTLLAVRNPFSVGAEHMKLYHAIVWSTSFATCSVMGAANRWGYSLFEFCWIRTMGPSDLNTFSWLLFYGPIMGFYLFSLVVFFVAQRALSAGTDETFEERRRALRNSRNYIAIFFFYWSFSGAVWIAQYVFVSRNSEKEYSLIVVFAVTMGLRGVLDFINLLNSSRLSLGLCFRTAGSKLDIRPALLKQSGRDGTSTAALLGEEEALLPLVAVNNMLRRDMIVYSTWGIVRCVNDCNRDIPLSAHSSITFGWDIGEVVHKQLKKRRGIKGTYDFRDYMPVAFAHLRMMYGVSMEEYLSSFEFREREPVGTGTVVSSLNGDRYSSTTTLSAPEDIRLVEARRSSTLGSSYGTSGEVGRDLGEHRERRMLESFTEGRGGSFFYFCDDQRYMMKTVSEEELGALLRLLPRYCEHVRKYSDSLITRLFGLHGIRINSANAWTHFIVMENCLQPGVRCNVKYDLKGSWVDRQALKPGKPIPGTLKDQDLPPGFHVNVGVERAQLVRAMIERDAQFLADNGIIDYSLLIGVRKLDPTNAEDVEAARRRGYTFGSASAGAIASVPLFSLSPNDSIGARTEDVRFYRQDCGGMVGDDTLTREPCVFHIGVIDYLQAYNTKKRLERFAKTTFLGKSGVGLSAAPVTPYKERFVTRVGALFQ* #PROT g8575.t1.1.5b6be70c g8575 MTPRIASPFMGNCIHLYAGALLPLLSAFAAGASATVRTYAASSSPDEDNDDNHALLYFIAGLVSTVVCAGTVSLFVLYPDLRKHPGQIILFRSLCDITFNLCQVFSYVAGEPGPDDASCLWLGVVNQFSAFASNAWYFALSLDTLLAVRNPFSVGAEHMKLYHAIVWSTSFATCSVMGAANRWGYSLFEFCWIRTMGPSDLNTFSWLLFYGPIMGFYLFSLVVFFVAQRALSAGTDETFEERRRALRNSRNYIAIFFFYWSFSGAVWIAQYVFVSRNSEKEYSLIVVFAVTMGLRGVLDFINLLNSSRLSLGLCFRTAGSKLDIRPALLKQSGRDGTSTAALLGEEEALLPLVAVNNMLRRDMIVYSTWGIVRCVNDCNRDIPLSAHSSITFGWDIGEVVHKQLKKRRGIKGTYDFRDYMPVAFAHLRMMYGVSMEEYLSSFEFREREPVGTGTVVSSLNGDRYSSTTTLSAPEDIRLVEARRSSTLGSSYGTSGEVGRDLGEHRERRMLESFTEGRGGSFFYFCDDQRYMMKTVSEEELGALLRLLPRYCEHVRKYSDSLITRLFGLHGIRINSANAWTHFIVMENCLQPGVRCNVKYDLKGSWVDRQALKPGKPIPGTLKDQVRQRVRRLLPEFVNAEIGLFCDDSCNVVRRARVILRCIVFHF* # PASA_UPDATE: g8574.t1, single gene model update, valid-1, status:[pasa:asmbl_8484,status:3], valid-1 NODE_612_length_20229_cov_59.5855 . gene 9062 11668 . - . ID=g8574;Name=g8574.t1 NODE_612_length_20229_cov_59.5855 . mRNA 9062 11668 . - . ID=g8574.t1;Parent=g8574;Name=g8574.t1 NODE_612_length_20229_cov_59.5855 . five_prime_UTR 11542 11668 . - . ID=g8574.t1.utr5p1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . exon 11381 11668 . - . ID=g8574.t1.exon1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . CDS 11381 11541 . - 0 ID=cds.g8574.t1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . exon 11210 11268 . - . ID=g8574.t1.exon2;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . CDS 11210 11268 . - 1 ID=cds.g8574.t1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . exon 10855 11089 . - . ID=g8574.t1.exon3;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . CDS 10855 11089 . - 2 ID=cds.g8574.t1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . exon 9062 10676 . - . ID=g8574.t1.exon4;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . CDS 9179 10676 . - 1 ID=cds.g8574.t1;Parent=g8574.t1 NODE_612_length_20229_cov_59.5855 . three_prime_UTR 9062 9178 . - . ID=g8574.t1.utr3p1;Parent=g8574.t1 #PROT g8574.t1 g8574 MTETANFALSVQSLVSENNDDDEVDLPEDVEDGRRLLSGAKRRVRPSSPHNKMTPRSSRRLTLGFIAVAAACVCGAIIYLLAHGDAGELSPIFPPAVSTVGPFKHGVVAADHETCSRIGARILADGGSAVDGAIAALLCIGVVHSFSSGIGGGGFMVVRNATGVEVIDFREVAPAAASEDMYEADPSLSKNGGLAVAVPAELRGFELAHRRHGRLPWRELVRPAAALATGGYRVSAALADAIAGSRTYILEDPVLAAVYAPGGTAAVEGDIIANPALGATLSTVAESGVDAFYSGPIAEAIARDCQNGGGILTVDDIAAYTANVHPAIDSLLFGRFRVYTAPPPAGGSVFLFVLNLVAGFFKDAGLDGLANPNAKGDAWAGLDYHRFAEACKFAYARRTQLADPAYVPNATDVSNIMIGEAEATRVRALITDDRTHPIEYYGPQFDGPPTAGTTHVSVLMGDESVSVTSTINLKFGSRIMSKSTGVLLNNEMDDFSSPNITNAFGLPPSRSNFIRPGKRPMSSSSPAIIVDEKALGADGRTASRIIAVVGSAGGSLISSSTAFVAANILFRNFNVHEAVAIPRIHHQLVPNNISAEVGIPKGAIAFLKHLGHTVIVGSSSHAVVQSAVQLDDGTFDGMSDPRKGGLAAGF* # PASA_UPDATE: g5091.t1, single gene model update, valid-1, status:[pasa:asmbl_3013,status:12],[pasa:asmbl_3014,status:12], valid-1 NODE_1919_length_8538_cov_45.7946 . gene 3767 8451 . + . ID=g5091;Name=g5091.t1 NODE_1919_length_8538_cov_45.7946 . mRNA 3767 8451 . + . ID=g5091.t1;Parent=g5091;Name=g5091.t1 NODE_1919_length_8538_cov_45.7946 . five_prime_UTR 3767 4057 . + . ID=g5091.t1.utr5p1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 3767 4069 . + . ID=g5091.t1.exon1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 4058 4069 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 4350 4438 . + . ID=g5091.t1.exon2;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 4350 4438 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 4744 4951 . + . ID=g5091.t1.exon3;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 4744 4951 . + 1 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 5149 5257 . + . ID=g5091.t1.exon4;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 5149 5257 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 5377 5534 . + . ID=g5091.t1.exon5;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 5377 5534 . + 2 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 5750 5935 . + . ID=g5091.t1.exon6;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 5750 5935 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 6279 6424 . + . ID=g5091.t1.exon7;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 6279 6424 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 6632 6714 . + . ID=g5091.t1.exon8;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 6632 6714 . + 1 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 6859 6953 . + . ID=g5091.t1.exon9;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 6859 6953 . + 2 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 7114 7173 . + . ID=g5091.t1.exon10;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 7114 7173 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 7450 7586 . + . ID=g5091.t1.exon11;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 7450 7586 . + 0 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . exon 7839 8451 . + . ID=g5091.t1.exon12;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . CDS 7839 7845 . + 1 ID=cds.g5091.t1;Parent=g5091.t1 NODE_1919_length_8538_cov_45.7946 . three_prime_UTR 7846 8451 . + . ID=g5091.t1.utr3p1;Parent=g5091.t1 #PROT g5091.t1 g5091 MASKDGDKPVSDPELIYTKLDKIGKGSFGEVFKGIDNRTKQVIAIKMIDLEEAEDEIEDIQQEITVLSQCDSPYVTRYYGSFLKNSKLWIIMEYLGGGSALDLLKPGPIEEQFIAIILREILKGLEYLHGEGKIHRDIKAANVLLSEKGEVKLADFGVAGQLTDTMTKKSTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEFAKGEPPNAELHPMRVLFLIPKNPAPTLEGNFSKPFKEFVAMCLNKDPNDRPTAKDLLKHKFIKGAKKTTNLQEVIDRYNRWKEEGGDDNSHSDGEDDRDDDEQDEGKWDFGTVKPVKKAPEAKAPAIPAASPVPAMAPPSAPAPAPPVPQKAPEPPKPEPPKVSAGLAAVVNPVLSKMGAQHSSDKAVVTAIEQVRKAFEMAEMSNPGFTDVVIKRLIQSVQSL* # PASA_UPDATE: g5090.t1, single gene model update, valid-1, status:[pasa:asmbl_3012,status:12], valid-1 NODE_1919_length_8538_cov_45.7946 . gene 171 3022 . - . ID=g5090;Name=g5090.t1 NODE_1919_length_8538_cov_45.7946 . mRNA 171 3022 . - . ID=g5090.t1;Parent=g5090;Name=g5090.t1 NODE_1919_length_8538_cov_45.7946 . five_prime_UTR 2956 3022 . - . ID=g5090.t1.utr5p1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 2866 3022 . - . ID=g5090.t1.exon1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 2866 2955 . - 0 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 2484 2652 . - . ID=g5090.t1.exon2;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 2484 2652 . - 0 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 2214 2313 . - . ID=g5090.t1.exon3;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 2214 2313 . - 2 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 1818 1908 . - . ID=g5090.t1.exon4;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 1818 1908 . - 1 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 1529 1600 . - . ID=g5090.t1.exon5;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 1529 1600 . - 0 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 1123 1225 . - . ID=g5090.t1.exon6;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 1123 1225 . - 0 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 800 867 . - . ID=g5090.t1.exon7;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 800 867 . - 2 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 522 618 . - . ID=g5090.t1.exon8;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 522 618 . - 0 ID=cds.g5090.t1;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . exon 171 332 . - . ID=g5090.t1.exon9;Parent=g5090.t1 NODE_1919_length_8538_cov_45.7946 . CDS 171 332 . - 2 ID=cds.g5090.t1;Parent=g5090.t1;3_prime_partial=true #PROT g5090.t1 g5090 MASFTSLGAIARQATRMVARPRGLLSVPQMTSVVAGEATSVSRQQVRNLSIHEYHSMDLLRKFGINVPRGKVARTAMEAEQIAADLSTEDMVIKAQVLAGGRGKGTFESGLKGGVRTIFSPAEARMYAEKMIGQKLFTKQTGPQGRICNEVYICERMYARREYYFAILMDRANQGPVIVASAFGGVDIETVAAENPDAIITEPIDITAGLTKAQARKVAQKMGFTPGCLDGAADNMLRLYDLFIKHDSTMVEINPMAEDASGKVFCMDAKVTFDENASFRQKEVFELRDRTQEDEREVAASKHDLNYIGLDGSIGCL # ORIGINAL: g8965.t1 original gene structure, not modified by PASA NODE_705_length_18825_cov_40.9065 AUGUSTUS gene 121 3486 . - . ID=g8965;Name=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS mRNA 121 3486 . - . ID=g8965.t1;Parent=g8965;Name=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 2974 3486 . - . ID=g8965.t1.exon1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 2974 3486 . - 0 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 2635 2763 . - . ID=g8965.t1.exon2;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 2635 2763 . - 0 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 1908 2340 . - . ID=g8965.t1.exon3;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 1908 2340 . - 0 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 1224 1748 . - . ID=g8965.t1.exon4;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 1224 1748 . - 2 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 986 1029 . - . ID=g8965.t1.exon5;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 986 1029 . - 2 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 555 713 . - . ID=g8965.t1.exon6;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 555 713 . - 0 ID=cds.g8965.t1;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS exon 121 270 . - . ID=g8965.t1.exon7;Parent=g8965.t1 NODE_705_length_18825_cov_40.9065 AUGUSTUS CDS 121 270 . - 0 ID=cds.g8965.t1;Parent=g8965.t1 #PROT g8965.t1 g8965 MHKHQAPLVIPPGWTTHKTLSGQRYYYDLSTGQAIWTVPGGTPVLQNGSAQASQSRYIAYTTSEGRRYYHDSVTGRTTWTRPFDGGEDVREAGSGSHGISVDKLRFVHPSYEQIHTCECYVYRGGQNSPTNPAEKSDWQIICPRQVVLCIVFTGHGGRDTGYKIVCGEQAKILEEFHIEAPKSQMSGEFVQWHEGSRTEIVFGARFPNTQQASLFLRALERAAEDAVAIAAAVSARAPGRRGRPDSIGGNTGTAKRNVAFNENEPDNLPTCEIVVYLPDGQSTSVRAPYAMSLGDLAELISSKRFIDRRAMALAIPGEHDAALNPALTIGDVEAGELVLVTASDVGSADWARDSRDGAAERKKKRSIKAVFSGLFRSASSPSSSKESESSLKRAEMRDSRLNASAPASLWRSDTERRENAPASAVRTSQSMMFPTGGSSTSASGGGGSGFAGYDHVAVGGGAKETRMTPSRSTPNFAPFWRRLSTGRSGDKKNKTDTPQHGTDATDTPPNVSHSPSSSSADSAPAGLQRRASQNTRGDPAHAKEFEVTFVGSMQLDHMQTDKSGDIATDAISAVASRGSEPKRVIIRIEVDTFSLVCAVTKVIIITFPTSSVLSVVPLSLVNSNTHCVGVFARDAIADGLVTFMAFNCTDS # PASA_UPDATE: g8967.t1, single gene model update, valid-1, status:[pasa:asmbl_8973,status:12], valid-1 NODE_705_length_18825_cov_40.9065 . gene 8219 16834 . - . ID=g8967;Name=g8967.t1 NODE_705_length_18825_cov_40.9065 . mRNA 8219 16834 . - . ID=g8967.t1;Parent=g8967;Name=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 13972 16834 . - . ID=g8967.t1.exon1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 13972 16834 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 13579 13781 . - . ID=g8967.t1.exon2;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 13579 13781 . - 2 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 11096 13475 . - . ID=g8967.t1.exon3;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 11096 13475 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 10791 10987 . - . ID=g8967.t1.exon4;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 10791 10987 . - 2 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 10460 10640 . - . ID=g8967.t1.exon5;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 10460 10640 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 10139 10329 . - . ID=g8967.t1.exon6;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 10139 10329 . - 2 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 9842 10025 . - . ID=g8967.t1.exon7;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 9842 10025 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 9096 9727 . - . ID=g8967.t1.exon8;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 9096 9727 . - 2 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 8839 8965 . - . ID=g8967.t1.exon9;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 8839 8965 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 8507 8709 . - . ID=g8967.t1.exon10;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 8507 8709 . - 2 ID=cds.g8967.t1;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . exon 8219 8380 . - . ID=g8967.t1.exon11;Parent=g8967.t1 NODE_705_length_18825_cov_40.9065 . CDS 8219 8380 . - 0 ID=cds.g8967.t1;Parent=g8967.t1 #PROT g8967.t1 g8967 MVQYDAGRTYGSFGAGAYTGRFHNSAGDLHASAGSHGGVGAARGTGSPSRPRSAPTARATTVSMLPSGSVWTQPRVSAAFGIPRPMTRTLELAPYQQRRVNPDLLLSYPRVVNGKRVVTAPYEPLVDPHLQDYFMRKFAMQNNSVRIHARAKTDPGMFAAALSKGARRQPKMHSMEYGPETIYRLKVVSGEKRGAGNDVRAFVTLYGEHGVSQRVRLKSSEMNFLPGQTDIFELRLPHLGVVSKLKVENAGTSAESSWFLEEIMLKDYRTGHRLQFDCHDWLSQTHGDGEVVRRLYASDPSKTKTKKKGDDHDGETAYEVTVHTGSMRGAGTDANVFVTLFGKKGDSGKKQLDNKKDNFERGKTDKFRVASDDLGSLKKLRIEHDNSGIGPGWFLEKVTVKDLHRDVTYYFPCSRWLAKDEGDGQIVRELKASKDPHAVAASHQYRIEVYTGDKRGAGTDANVTVSLFGEKGESGERNLDNKKNNFERGMIDTFIVEAIDLGKLTKLRVSHDNSGVQPGWFLDKIVAEDMQSGIKYTFPCSRWLAKDEDDGKISRELICTGGDAFDVGVPYHVHVSTSDIRNAGTDANVFITLYGEKGNSGAVQLSKKGRNCFERNMVDVFDIDSAELGKLKKVRVWHDNSGASAGWHLDKVRVECPTLGLAYTFPCKQWLAKDEGDGLIERDLKPTDKPEKFTPKDVWVAEVITGDERGAGTDANVYVQVYGEKGKKSDVIQLDSAGNDFEQGHSDKFRIEFDDIGKLSKMRVWHDGAGAADGWFLDKVELHKAGSEKDAYSFPCGRWLARDEEDGNLVREIPATGPRVKKPLSLRKYRVSVHTGNKMGSGTDANVFLNIFGENGDTGERPLEKSETHTNKFERKNVDVFTVEAVDLGALTKVRIGHDGTGPGAGWFLEKIVVQDHDGKEKVFPCGRWLAEDEDDGKIVRELSVMGKGGILENTITYEVSVTTGDKRGAGTDANVFLQIFGKDGDTGEVKLHKAENNKNKFERGRTDKFIVDAMDVGKLKKIIIGHDGSGPGAGWFLDKIAINVPSSGKQYLFKCERWLATDEDDGEIVRELRVDEDSIHDVQKKGSYAVTVYTGDKRGAGTDANVTMVVYGDKGKSSEFLLDNESNNHERGSADTYKLDIEDVGIIYKMRIWHDGTGPGAGWFLDKVEMEDLKTGDSYELPCERWLAEDEDDGELVRELPAYYKPKKEGKKKHKARPVTMYKVTVHTGDKMGAGTDANVFVNMYGEFGDTGERFLTRSHTNKNKFERKQDDVFLVEAVNLGEIQKIKVGHDNSGPGPGWFLGYIEVEDPDSGKTFKFPCERWFDKKEDDGLIVRELAPAGKKGKKKGGTKYIVSVYTGDKRGGGTDANVHVVLYGENGDTGPIKLEQSETNRNKFERKQKDVFTVEAIELGALKKLKIGHDNKGGSAGWYLDKIEVDAPTEGRHYVFPCERWLAKDEDDGELERELYPSKSQSGKYKPKIPYEVLVRTGDKRGAGTDAQVVIELYGEKGHTVAVPLNSKGDAFERGKEDRFDVELDDVGQINRLRIGHDGKKPGDGWYLENIEMTNGKTGERYVFECRRWLAKDEDDGLLFRDLDVSKYDGGQSGKKRKAPKTRPITAYRVSVHTGDKRGAGTDANVLINIKGKKGETGSRPLEKSETNKNKFERKQTDIFTVEAPSVGKITSIDIGHDNSGPGPGWYLGYIEIEDPVTEKTYKFPCEKWFDKKEDDGKIERELTPENADDSDDSDSENDSENDDDGSSGDDKKKKKKKKEGSRSRSGSRSGSRSRSRSPSKHGSDKEDKKDKKDKKDKKHGKVTYTVSTYTGDVRNAGTDADVFIQLYGADGTETKKIRLKKKGRNLFERGQTDTFEIEDEDVGDIKKVRLGHDGDGVASAWFVDKVVVDAPHIGKLYTFPCERWFGGDEDDGKTERVLKGEAKKYRAKINYDVAVYTSDEKRAGTSSKVSIAIYGEKGKVEDMRLKPDKAFDRGSMEEFSIESEDLGDLKKIRIGHDNGGAAPGWHLDKVEITNTESGKKYVFPCGRWLAKDEDDGRIVRELPVKSKKEKATLNSYKVTVFTGDKRGAGTDANVYICLFGENGDTGDLFLEESEKNKNKFERKQKDVFTVEAVDLGTLASVRIGHDNSGPGPAWYLDKVHVKDLKTGVKYIFPCDRWLAMDEDDGAIVRDILCKDSKSKKGAKVAYDVSIYTDDVKHGGTDGDVLLTLVGEKDRTEEIRIKNEHGEMFGRASREDVLIESKDLGTIKKVKIAHKGAEKWRLHKIVIKSGASGDKHVFMYDGALKGRETVDVKLTDVHKSKSSKTKDLKTVHYNVEVVTGDKRGAGTDANVFLTIYGANGDTGKRQLKGNGNLFERGQHDEFVIEALELGKLKKIRIEHDNSGPGPGWFLDEVNITDAKGKTVRFECNRWLDKKEDDGEIWRELYAS* # PASA_UPDATE: g8966.t1, single gene model update, valid-1, status:[pasa:asmbl_8974,status:12], valid-1 NODE_705_length_18825_cov_40.9065 . gene 4479 7457 . - . ID=g8966;Name=g8966.t1 NODE_705_length_18825_cov_40.9065 . mRNA 4479 7457 . - . ID=g8966.t1;Parent=g8966;Name=g8966.t1 NODE_705_length_18825_cov_40.9065 . five_prime_UTR 7418 7457 . - . ID=g8966.t1.utr5p1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 7247 7457 . - . ID=g8966.t1.exon1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 7247 7417 . - 0 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 6739 6837 . - . ID=g8966.t1.exon2;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 6739 6837 . - 0 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 6371 6542 . - . ID=g8966.t1.exon3;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 6371 6542 . - 0 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 5919 6099 . - . ID=g8966.t1.exon4;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 5919 6099 . - 2 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 5299 5460 . - . ID=g8966.t1.exon5;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 5299 5460 . - 1 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 4918 5121 . - . ID=g8966.t1.exon6;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 4918 5121 . - 1 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . exon 4479 4708 . - . ID=g8966.t1.exon7;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . CDS 4588 4708 . - 1 ID=cds.g8966.t1;Parent=g8966.t1 NODE_705_length_18825_cov_40.9065 . three_prime_UTR 4479 4587 . - . ID=g8966.t1.utr3p1;Parent=g8966.t1 #PROT g8966.t1 g8966 MAYVHPKGWDAVTDPQDPIEAYSLIHQHVIPQWLLHGHDEIMNSKVNYFVDTWEALKNISRFDGSEWKVVLGFAVLFTILRVIVVNFILTPIAKRSGLIQRDKTKNVTKFTESTWKVMYYTSIWAVTHYFLQQPEFPYFYKPAEVWRDWAIGAPVQAPIYWIYAVAAGFYVHSIFATAFMDEKRKDYIVMYIHHIVTLALIGFSYAVRYHNIGLVVLYLHDINDVFLELAKVFLTFKETDRGYSRIADIGSTGFFALFTVSWVLFRLYWLPTKVLVSAGAWAKIVMDTPPFYVLFNGLLWTLQFMHIYWFMFILKLLFKLALGGSVEDTRDVEAEAAARARAQSAGSSDKHAASPKSSAAQKRKSKKEA* # PASA_UPDATE: g8968.t1, single gene model update, valid-1, status:[pasa:asmbl_8975,status:12], valid-1 NODE_705_length_18825_cov_40.9065 . gene 17735 18584 . - . ID=g8968;Name=g8968.t1 NODE_705_length_18825_cov_40.9065 . mRNA 17735 18584 . - . ID=g8968.t1;Parent=g8968;Name=g8968.t1 NODE_705_length_18825_cov_40.9065 . five_prime_UTR 18543 18584 . - . ID=g8968.t1.utr5p1;Parent=g8968.t1 NODE_705_length_18825_cov_40.9065 . exon 18365 18584 . - . ID=g8968.t1.exon1;Parent=g8968.t1 NODE_705_length_18825_cov_40.9065 . CDS 18365 18542 . - 0 ID=cds.g8968.t1;Parent=g8968.t1 NODE_705_length_18825_cov_40.9065 . exon 17735 18247 . - . ID=g8968.t1.exon2;Parent=g8968.t1 NODE_705_length_18825_cov_40.9065 . CDS 17976 18247 . - 2 ID=cds.g8968.t1;Parent=g8968.t1 NODE_705_length_18825_cov_40.9065 . three_prime_UTR 17735 17975 . - . ID=g8968.t1.utr3p1;Parent=g8968.t1 #PROT g8968.t1 g8968 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEDEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIREADMDGDGQVNYEEFVKMMTSK* # ORIGINAL: g14398.t1 original gene structure, not modified by PASA NODE_1865_length_8842_cov_37.726 AUGUSTUS gene 1778 4235 . - . ID=g14398;Name=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS mRNA 1778 4235 . - . ID=g14398.t1;Parent=g14398;Name=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 3821 4235 . - . ID=g14398.t1.exon1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 3821 4235 . - 0 ID=cds.g14398.t1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 3526 3687 . - . ID=g14398.t1.exon2;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 3526 3687 . - 2 ID=cds.g14398.t1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 3175 3259 . - . ID=g14398.t1.exon3;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 3175 3259 . - 2 ID=cds.g14398.t1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 2462 2948 . - . ID=g14398.t1.exon4;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 2462 2948 . - 1 ID=cds.g14398.t1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 2107 2217 . - . ID=g14398.t1.exon5;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 2107 2217 . - 0 ID=cds.g14398.t1;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 1778 1834 . - . ID=g14398.t1.exon6;Parent=g14398.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 1778 1834 . - 0 ID=cds.g14398.t1;Parent=g14398.t1 #PROT g14398.t1 g14398 MYRSVWDLIVPRKTCGGDGNCDASVATLSTATSLSMMHTSLMPHAVGSSPSRVIVARSADEEVIEGADGDVNWADLDKGKFFALASSLFFCVRLAVYPAALVKTRLQVQRKGGATQYKGTIDVFSKIIKYEGFRGLYKGHLTHPTSLYLGTPGFTTVAFGIMPAQMVYLTSYELLKAKFGELQLDGIEGGRRDLLTNFFAGSCASLASQTIVVPVDVISQKLMLQGQGRMPTPVSAPAATAAPIQTVTLQRHTTSTTTTSSPAPSPAAAAHSASQQQRPRLVGGIQVFLDIVRTEGVRGLYRGYLVSMMLYAPSSGTWWATYSTAKRVLGSTVAPALRSGVPAPLVWSPEVEKTGVHVISAMCAATVAATVTNPLDVIKTRLQVDRSSLRQTVATLLREDGVWGITRGLSARIMNMVPVSVLMVLVYENVKILSKKSS* # ORIGINAL: g14399.t1 original gene structure, not modified by PASA NODE_1865_length_8842_cov_37.726 AUGUSTUS gene 4760 6066 . + . ID=g14399;Name=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS mRNA 4760 6066 . + . ID=g14399.t1;Parent=g14399;Name=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 4760 5074 . + . ID=g14399.t1.exon1;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 4760 5074 . + 0 ID=cds.g14399.t1;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 5286 5436 . + . ID=g14399.t1.exon2;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 5286 5436 . + 0 ID=cds.g14399.t1;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 5632 5736 . + . ID=g14399.t1.exon3;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 5632 5736 . + 2 ID=cds.g14399.t1;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS exon 6035 6066 . + . ID=g14399.t1.exon4;Parent=g14399.t1 NODE_1865_length_8842_cov_37.726 AUGUSTUS CDS 6035 6066 . + 2 ID=cds.g14399.t1;Parent=g14399.t1 #PROT g14399.t1 g14399 MSEPTVVDKGALGSSDGASDAPGGPDTSPMHADSINAQPPALSIQLSNESDKSELGPDGEKKAAGFASYQDARRASAAAASSASRAQLRAMDVNIEHLSEDLFGKLSDYIQGEMRLTSGEFGLLRELNETTTKKYVEMTALAAGLNVSMSSIREKYKDLAPLLDQIDSISENVAELEQAAMRLDDYSKRLEAKFKKLEKR* # PASA_UPDATE: g14397.t1, single gene model update, valid-1, status:[pasa:asmbl_2845,status:12], valid-1 NODE_1865_length_8842_cov_37.726 . gene 99 1122 . + . ID=g14397;Name=g14397.t1 NODE_1865_length_8842_cov_37.726 . mRNA 99 1122 . + . ID=g14397.t1;Parent=g14397;Name=g14397.t1 NODE_1865_length_8842_cov_37.726 . exon 99 260 . + . ID=g14397.t1.exon1;Parent=g14397.t1 NODE_1865_length_8842_cov_37.726 . CDS 99 260 . + 0 ID=cds.g14397.t1;Parent=g14397.t1;5_prime_partial=true NODE_1865_length_8842_cov_37.726 . exon 523 1122 . + . ID=g14397.t1.exon2;Parent=g14397.t1 NODE_1865_length_8842_cov_37.726 . CDS 523 867 . + 0 ID=cds.g14397.t1;Parent=g14397.t1 NODE_1865_length_8842_cov_37.726 . three_prime_UTR 868 1122 . + . ID=g14397.t1.utr3p1;Parent=g14397.t1 #PROT g14397.t1 g14397 QSAMDAYESCVIHGFSLRGWLGVLDMHSRECNLEETLTAIDHIAHFYSCRHSLKFHLRLGPIPNALGRLIAMHGAVRVRELAGPLAAPGTPIDRLLSDAVAWGVADSTSIAPERRRPSSMSTCDAIAEAAEEDSAQHSPQQSTEHSPRQQAPYDNRQRLSAPGVSASV* # PASA_UPDATE: g14400.t1, single gene model update, valid-1, status:[pasa:asmbl_2844,status:12], valid-1 NODE_1865_length_8842_cov_37.726 . gene 6343 7741 . - . ID=g14400;Name=g14400.t1 NODE_1865_length_8842_cov_37.726 . mRNA 6343 7741 . - . ID=g14400.t1;Parent=g14400;Name=g14400.t1 NODE_1865_length_8842_cov_37.726 . five_prime_UTR 7695 7741 . - . ID=g14400.t1.utr5p1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . exon 7692 7741 . - . ID=g14400.t1.exon1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . CDS 7692 7694 . - 0 ID=cds.g14400.t1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . exon 7244 7318 . - . ID=g14400.t1.exon2;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . CDS 7244 7318 . - 0 ID=cds.g14400.t1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . exon 7046 7129 . - . ID=g14400.t1.exon3;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . CDS 7046 7129 . - 0 ID=cds.g14400.t1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . exon 6343 6686 . - . ID=g14400.t1.exon4;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . CDS 6462 6686 . - 0 ID=cds.g14400.t1;Parent=g14400.t1 NODE_1865_length_8842_cov_37.726 . three_prime_UTR 6343 6461 . - . ID=g14400.t1.utr3p1;Parent=g14400.t1 #PROT g14400.t1 g14400 MPPKVPTKSKAQKAMAASSGGKAKKKKWSKGKVRDKLENQVLFDKASYEKMLKEVPTYRLITPSVVSERLRCRGSLARMVLRELAAKELIKPISLHHSQYIYTTTKTLKAPEKTADAVAEKKKDDDDE* # ORIGINAL: g8186.t1 original gene structure, not modified by PASA NODE_1320_length_12131_cov_41.5122 AUGUSTUS gene 2260 7743 . - . ID=g8186;Name=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS mRNA 2260 7743 . - . ID=g8186.t1;Parent=g8186;Name=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 5605 7743 . - . ID=g8186.t1.exon1;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 5605 7743 . - 0 ID=cds.g8186.t1;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 4210 5387 . - . ID=g8186.t1.exon2;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 4210 5387 . - 0 ID=cds.g8186.t1;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 3763 4025 . - . ID=g8186.t1.exon3;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 3763 4025 . - 1 ID=cds.g8186.t1;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 2260 3581 . - . ID=g8186.t1.exon4;Parent=g8186.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 2260 3581 . - 2 ID=cds.g8186.t1;Parent=g8186.t1 #PROT g8186.t1 g8186 MSVTLSGVSAVTGITCVSALNHLETDDDGPRSDEERASAVERAFMRAKIGLFGVLFVMSKEPSSERMFALFEIVADFLQLLSFPFSEAFPWDSAWTGWLSEATRITRFQWYLEISAGVTDAIFFIALALVIFVLLNATYVGVAFSHGKRMSMPLVRILRTFASLFVTIFFLPLIDIFGARFACHSVDINAGESACEWTGGEAVVKAVAIFTIILLTTLSLCVEATFFDESPISKGVLSRPHARIDVAYLLYKSVISVLDSTLNLHHSGGQWIMVGVLVAGSFGFAYIYTMYPAYYRFGFARLRAVLQWGLAWASISLVVAKISNNREDPIAPVLFFVGIPLAFFAGFLAIGERRRRLLDMDTASISSPYDAELKVRFMLDSVVKHRRLATHADSAGEDEEAASADAHIIAQAEQVYRQALRIIGSPSILLVFQSQFYYSVACNHVLGARALAKASRAAPFHIDEEFFVFRRQQASQEYFSSSANDSKDVIVYMTFMQSVQAARRAEAKCLHAQAAFWTELMHANPDATRLRAISSYISANIALGQQSLHTLLRISPDSPQVCRMYANWLGNVMYDHERKMAYLNRAALYENAQGVEKETTSTQGGALAIFDGVDESGGANSTKRSALNVDSMRDGSSAMLNLSCEEERLGIIDNANTSAVRLFGYVRHDLVGRHVSAMVSPPYSREIESAAQAYVAFGDLRIRGKRNVFLRNKAGYIFPGRLTIKDIPGRGVLPSFVAIAEPIETADHFLLADATSKRIVGCTANCVSLFGVHVEDIHDGKLFLNEIIAEYDQLRGAIGTYAGSEVRIVGAEGSTGAPRGRRTVAWESTMLVGEGSVVVLRIQATIDERNAEEDNVNEQKRALSSPSSPVCEYNGHAVYPSTGAPTASAIPHAAPGARLSGESSHTHAPVVNFNAVAWCDAPQLNQPETDGEDDKYVGIDTVPAHSHSHSIAEKDPPETIELREIRPSLRSTSFAATSSRGSHSMGDSRSSGSRLSTKSRKVNVLRRTLVSANSSGLGGSLKMFRAVVVASVVAVIGVAIAAYVVEKQQVSEFTQSFVVLNAAADIRFHATSGGYYARLIALAQTGLRPTSEVPGFMARLQTVADGLEEGYRIMNARIPKMSPEHRQLFLSQSINYVLNRIGDSSNFTLVLRPSTLPEATKSVIARIRNLMFANLTDFLNSPTYVVPILNGLDGYDYTKAVNRSAAFTMQEVVDQIKGMRSVFAAIAASGLVFVFVLSVCVILPTVIYVERTSDNTLRVFENVPRETIRKMRRKCNKKLRELEAAEDDEEGDDVDGTDDDDDDDDDDDAEVSKVRAARRAALASSSVHKSAVRIQSRRTGRYIAAMALKMGALFILGVLFFSLSYYFGFVRIEDELRDGARRVNYASYIRTTTRVLAWTTREYTSSMTSPAAIAFMDTAAYEAVEILKGLQIGSSVFGLAPQGSLSAQHNALINEDACLWTTDATVLSACRSTSNGILANGLHQAMLWYLEYLRDLKREPASLFNRTIGARVLNDPMFIEARDVEQLYLQPALKRSVDYYNQDIDDLTSTSTQIVLALLIVFIVLVVGAYFAVYERLIVALDAEMKRTRWMMLMLPDDELGQMTEWFDAYVATLSAGRSTMRSTRRRRDVTNV* # PASA_UPDATE: g8185.t1, single gene model update, valid-1, status:[pasa:asmbl_1199,status:12],[pasa:asmbl_1200,status:12], valid-1 NODE_1320_length_12131_cov_41.5122 . gene 112 1430 . - . ID=g8185;Name=g8185.t1 NODE_1320_length_12131_cov_41.5122 . mRNA 112 1430 . - . ID=g8185.t1;Parent=g8185;Name=g8185.t1 NODE_1320_length_12131_cov_41.5122 . five_prime_UTR 1153 1430 . - . ID=g8185.t1.utr5p1;Parent=g8185.t1 NODE_1320_length_12131_cov_41.5122 . exon 112 1430 . - . ID=g8185.t1.exon1;Parent=g8185.t1 NODE_1320_length_12131_cov_41.5122 . CDS 112 1152 . - 0 ID=cds.g8185.t1;Parent=g8185.t1;3_prime_partial=true #PROT g8185.t1 g8185 MSQTHAPLLPLHPGMAPPAGVGAPLAASLMAPPAADTYRKRRYEFVDDYDLAAGVRRPEAAKAAPAKRRRTSAASNTAQTQTQTQTQTQTQTQQQQQQLPQPQIALLQHHYQLRQRFEEQQQQQIFQHHQRQRQEQQQLLQRQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQGRAHSSALPESLPAHNRSTAHAQAQAQAQAQAQSQPVYRPYAHPPPPTRSRAFVDAHTIASAGGCRSTSPVVVVPGLALQHSITPRIHSLIQPVLLSDPAVVGREQQPPPDGASGRASASGANDRTVFNETFEQPLGLWRRTDESDLKRLEKDWQWKAILTSEGSYV # PASA_UPDATE: g8187.t1, single gene model update, valid-1, status:[pasa:asmbl_1201,status:12], valid-1 NODE_1320_length_12131_cov_41.5122 . gene 8550 10046 . + . ID=g8187;Name=g8187.t1 NODE_1320_length_12131_cov_41.5122 . mRNA 8550 10046 . + . ID=g8187.t1;Parent=g8187;Name=g8187.t1 NODE_1320_length_12131_cov_41.5122 . five_prime_UTR 8550 8592 . + . ID=g8187.t1.utr5p1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . exon 8550 8595 . + . ID=g8187.t1.exon1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . CDS 8593 8595 . + 0 ID=cds.g8187.t1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . exon 8943 9006 . + . ID=g8187.t1.exon2;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . CDS 8943 9006 . + 0 ID=cds.g8187.t1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . exon 9232 9473 . + . ID=g8187.t1.exon3;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . CDS 9232 9473 . + 2 ID=cds.g8187.t1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . exon 9741 10046 . + . ID=g8187.t1.exon4;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . CDS 9741 9869 . + 0 ID=cds.g8187.t1;Parent=g8187.t1 NODE_1320_length_12131_cov_41.5122 . three_prime_UTR 9870 10046 . + . ID=g8187.t1.utr3p1;Parent=g8187.t1 #PROT g8187.t1 g8187 MTTHLKKNRKKRGHVSAGHGRVGKHRKHPSGRGNAGGQHHHRILMDKYHPGYFGKVGMRHFHLTRQSYHRPAVNLDTLWSLVSEQTKGERKDGKVPVIDAVRAGFHKVLGKGLLPKQPVIVKAKYFSRIAEEKIKAVGGTCVLTA* # ORIGINAL: g8188.t1 original gene structure, not modified by PASA NODE_1320_length_12131_cov_41.5122 AUGUSTUS gene 10678 11594 . - . ID=g8188;Name=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS mRNA 10678 11594 . - . ID=g8188.t1;Parent=g8188;Name=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 11526 11594 . - . ID=g8188.t1.exon1;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 11526 11594 . - 0 ID=cds.g8188.t1;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 11266 11370 . - . ID=g8188.t1.exon2;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 11266 11370 . - 0 ID=cds.g8188.t1;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 11060 11149 . - . ID=g8188.t1.exon3;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 11060 11149 . - 0 ID=cds.g8188.t1;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS exon 10678 10866 . - . ID=g8188.t1.exon4;Parent=g8188.t1 NODE_1320_length_12131_cov_41.5122 AUGUSTUS CDS 10678 10866 . - 0 ID=cds.g8188.t1;Parent=g8188.t1 #PROT g8188.t1 g8188 MNNGSTVKVPVSRTRETGTMAGEMSASLFPDATATGTRVRVAVDTMNNRTTVVSMPPQLEQAMSGPAILRGRCIPAEMARAIADSIRKAGLNEVVAIVSDDNNSDALAMTIGDTLCTISISPSRTHVTTADDALRNVVHGAIARHFSKNE* # ORIGINAL: g5723.t1 original gene structure, not modified by PASA NODE_3895_length_2555_cov_29.5347 AUGUSTUS gene 566 1898 . - . ID=g5723;Name=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS mRNA 566 1898 . - . ID=g5723.t1;Parent=g5723;Name=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS exon 1306 1898 . - . ID=g5723.t1.exon1;Parent=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS CDS 1306 1898 . - 0 ID=cds.g5723.t1;Parent=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS exon 908 1049 . - . ID=g5723.t1.exon2;Parent=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS CDS 908 1049 . - 1 ID=cds.g5723.t1;Parent=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS exon 566 595 . - . ID=g5723.t1.exon3;Parent=g5723.t1 NODE_3895_length_2555_cov_29.5347 AUGUSTUS CDS 566 595 . - 0 ID=cds.g5723.t1;Parent=g5723.t1 #PROT g5723.t1 g5723 VWVEDNDAVVSIDIGGVRELDSLVIIGQPLLASIGNLSSLTTVSGDLLLSNLTNLASVELASLVTVGGTFNVSFCPLVTVISPPNLASIGGSVVVQEMARLQSMAAPFLVQVGGSVVFTYNALTSIISAPVLTTVGGNITFDGTRGPISFTLNLPMITTIGGDVTIVNSNPTHVPFPDIQTIGGSYTLVNNTFNPRLWGSLPIYSSLTSIGGQIRIENNANVGSFVLAPNIIEVRRGLTISNNPDLMRCPPTHG* # ORIGINAL: g3029.t1 original gene structure, not modified by PASA NODE_8209_length_382_cov_46.316_potentialcontaminant AUGUSTUS gene 2 382 . + . ID=g3029;Name=g3029.t1 NODE_8209_length_382_cov_46.316_potentialcontaminant AUGUSTUS mRNA 2 382 . + . ID=g3029.t1;Parent=g3029;Name=g3029.t1 NODE_8209_length_382_cov_46.316_potentialcontaminant AUGUSTUS exon 2 382 . + . ID=g3029.t1.exon1;Parent=g3029.t1 NODE_8209_length_382_cov_46.316_potentialcontaminant AUGUSTUS CDS 2 382 . + 0 ID=cds.g3029.t1;Parent=g3029.t1 #PROT g3029.t1 g3029 RGLTAISSAFPALETVNGSVTVNDNFALVTVNGSFSSLLTAGALVLLDNEHVTDVAGSFGRLRFVGGDVTLSMNPRLTAFGGLGSLERVNGSLQLIDCPSLASFSRLASVAADGVGGDVVVRHVGLD # ORIGINAL: g144.t1 original gene structure, not modified by PASA NODE_7649_length_419_cov_28.686 AUGUSTUS gene 167 361 . - . ID=g144;Name=g144.t1 NODE_7649_length_419_cov_28.686 AUGUSTUS mRNA 167 361 . - . ID=g144.t1;Parent=g144;Name=g144.t1 NODE_7649_length_419_cov_28.686 AUGUSTUS exon 167 361 . - . ID=g144.t1.exon1;Parent=g144.t1 NODE_7649_length_419_cov_28.686 AUGUSTUS CDS 167 361 . - 0 ID=cds.g144.t1;Parent=g144.t1 #PROT g144.t1 g144 MLPCQDTPGVKQTYDAAATVPSSLVALMSAESAGHVGVGGGLTRFLFVQRVQMPTYLIAMAAGRL # ORIGINAL: g5332.t1 original gene structure, not modified by PASA NODE_1330_length_12062_cov_42.4962 AUGUSTUS gene 73 1443 . - . ID=g5332;Name=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS mRNA 73 1443 . - . ID=g5332.t1;Parent=g5332;Name=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 1251 1443 . - . ID=g5332.t1.exon1;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 1251 1443 . - 0 ID=cds.g5332.t1;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 1004 1110 . - . ID=g5332.t1.exon2;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 1004 1110 . - 2 ID=cds.g5332.t1;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 699 797 . - . ID=g5332.t1.exon3;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 699 797 . - 0 ID=cds.g5332.t1;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 429 526 . - . ID=g5332.t1.exon4;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 429 526 . - 0 ID=cds.g5332.t1;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 73 217 . - . ID=g5332.t1.exon5;Parent=g5332.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 73 217 . - 1 ID=cds.g5332.t1;Parent=g5332.t1 #PROT g5332.t1 g5332 MFTLSFLASSALVRVSGKCPNAPDAVPLPTAVRVGSRKSELALTQTRTIIAALQKLYPSITFEIVAMSTTGDNVLDRALSKIGEKSLFTKELEVALAKKEVDFVVHSLKDLPTTLPEGMMVGAIYRRDNPYDVVVMHPRHSGRRLADLPAGSVIGTSSLRRIAQLKRSYPALEYKDIRGNINTRLRKLDEGQYDAIVLASAGLDRMGWQNRISE # PASA_UPDATE: g5333.t1, single gene model update, valid-1, status:[pasa:asmbl_1227,status:3], valid-1 NODE_1330_length_12062_cov_42.4962 . gene 1913 5625 . + . ID=g5333;Name=g5333.t1 NODE_1330_length_12062_cov_42.4962 . mRNA 1913 5625 . + . ID=g5333.t1;Parent=g5333;Name=g5333.t1 NODE_1330_length_12062_cov_42.4962 . five_prime_UTR 1913 2093 . + . ID=g5333.t1.utr5p1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 1913 2231 . + . ID=g5333.t1.exon1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 2094 2231 . + 0 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 2716 2869 . + . ID=g5333.t1.exon2;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 2716 2869 . + 0 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 3160 3254 . + . ID=g5333.t1.exon3;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 3160 3254 . + 2 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 3461 3552 . + . ID=g5333.t1.exon4;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 3461 3552 . + 0 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 3724 3822 . + . ID=g5333.t1.exon5;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 3724 3822 . + 1 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 4057 4125 . + . ID=g5333.t1.exon6;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 4057 4125 . + 1 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 4405 4497 . + . ID=g5333.t1.exon7;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 4405 4497 . + 1 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 4646 4739 . + . ID=g5333.t1.exon8;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 4646 4739 . + 1 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 4919 5056 . + . ID=g5333.t1.exon9;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 4919 5056 . + 0 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . exon 5245 5625 . + . ID=g5333.t1.exon10;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . CDS 5245 5427 . + 0 ID=cds.g5333.t1;Parent=g5333.t1 NODE_1330_length_12062_cov_42.4962 . three_prime_UTR 5428 5625 . + . ID=g5333.t1.utr3p1;Parent=g5333.t1 #PROT g5333.t1 g5333 MSDGREYWLIAAPADRTREQTWERLQSKTASANISVNYKFDIPELKVGTLDALVSLSDELGKHNAFVEGIVKKIASLMADLLEDQKEKLDSNLTANGGDLDRYLTSFQWDVSKYPLKSSIQELTDLIVKEVSAIDGELKGKVQTFNSVKNNLQAVERKATGNLLVRSLHEVVTKEHFVLDSEYLQTVLVVVPKPQTKEWLTSYERLAPMVVPRSSKLIIEEGDYALYSVTIFQRVYDEFKNNAREKKFIVRDFKYDENEVENSKKEKGNLEKELKKQWTSIVRWAKTQFSEAYMGLVHLKALRVFVESVLRYGLPVNFQAMLCLPKKGGDKKLREALLQLYGDLDGGASKATKGSAPDVEIPGLLGQHDYLPFVCYKVSLSYTE* # PASA_UPDATE: g5334.t1, single gene model update, valid-1, status:[pasa:asmbl_1223,status:3], valid-1 # PASA_UPDATE: g5334.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1224,status:3], valid-1 NODE_1330_length_12062_cov_42.4962 . gene 5643 7918 . - . ID=g5334;Name=g5334.t1 NODE_1330_length_12062_cov_42.4962 . mRNA 5643 7918 . - . ID=g5334.t1;Parent=g5334;Name=g5334.t1 NODE_1330_length_12062_cov_42.4962 . five_prime_UTR 7781 7918 . - . ID=g5334.t1.utr5p1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 7748 7918 . - . ID=g5334.t1.exon1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 7748 7780 . - 0 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 7357 7468 . - . ID=g5334.t1.exon2;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 7357 7468 . - 0 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 6809 7180 . - . ID=g5334.t1.exon3;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 6809 7180 . - 2 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 6501 6565 . - . ID=g5334.t1.exon4;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 6501 6565 . - 2 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 6085 6267 . - . ID=g5334.t1.exon5;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 6085 6267 . - 0 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . exon 5643 5839 . - . ID=g5334.t1.exon6;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . CDS 5792 5839 . - 0 ID=cds.g5334.t1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . three_prime_UTR 5643 5791 . - . ID=g5334.t1.utr3p1;Parent=g5334.t1 NODE_1330_length_12062_cov_42.4962 . mRNA 5643 7918 . - . ID=g5334.t1.1.5b6be70a;Parent=g5334;Name=g5334.t1 NODE_1330_length_12062_cov_42.4962 . five_prime_UTR 7781 7918 . - . ID=g5334.t1.1.5b6be70a.utr5p1;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . exon 7748 7918 . - . ID=g5334.t1.1.5b6be70a.exon1;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . CDS 7748 7780 . - 0 ID=cds.g5334.t1.1.5b6be70a;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . exon 7357 7468 . - . ID=g5334.t1.1.5b6be70a.exon2;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . CDS 7357 7468 . - 0 ID=cds.g5334.t1.1.5b6be70a;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . exon 6809 7180 . - . ID=g5334.t1.1.5b6be70a.exon3;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . CDS 6809 7180 . - 2 ID=cds.g5334.t1.1.5b6be70a;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . exon 6501 6565 . - . ID=g5334.t1.1.5b6be70a.exon4;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . CDS 6501 6565 . - 2 ID=cds.g5334.t1.1.5b6be70a;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . exon 5643 6267 . - . ID=g5334.t1.1.5b6be70a.exon5;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . CDS 5848 6267 . - 0 ID=cds.g5334.t1.1.5b6be70a;Parent=g5334.t1.1.5b6be70a NODE_1330_length_12062_cov_42.4962 . three_prime_UTR 5643 5847 . - . ID=g5334.t1.1.5b6be70a.utr3p1;Parent=g5334.t1.1.5b6be70a #PROT g5334.t1 g5334 MSPTQNYGRLKVAELKALLSDRSLATSGTKSELIARLEENDKTAASGDAPTGDAPSATSASTAAPVATAPSESAQTASAQPHAQQAQLPAQKKAAASAVAAAANAAAVSTAAAAHAAPAPASTPAAAARSNAGEESASEAERRIRRAERFGIAPAEDDKKSVRAQKFGGAAEADKKKQPKTAQAQAPAPAQPPTVASVVDNAKLLQRAQRFGTVQAEPPVTPAAVVSAEPKAATANGATNGSAKRPIDNVSEEERERKRQRALRFGLPVK* #PROT g5334.t1.1.5b6be70a g5334 MSPTQNYGRLKVAELKALLSDRSLATSGTKSELIARLEENDKTAASGDAPTGDAPSATSASTAAPVATAPSESAQTASAQPHAQQAQLPAQKKAAASAVAAAANAAAVSTAAAAHAAPAPASTPAAAARSNAGEESASEAERRIRRAERFGIAPAEDDKKSVRAQKFGGAAEADKKKQPKTAQAQAPAPAQPPTVASVVDNAKLLQRAQRFGTVQAEPPVTPAAVVSAEPKAATANGATNGSAKRPIDNVSEEERVGASLSMYVCMYVCVCVCVCVRFYIYVCVFVRSYAFFCSFLWRPCVYTHTDGACACCLWKDMYVDGLAKHDHNDVWDV* # ORIGINAL: g5335.t1 original gene structure, not modified by PASA NODE_1330_length_12062_cov_42.4962 AUGUSTUS gene 8354 10138 . - . ID=g5335;Name=g5335.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS mRNA 8354 10138 . - . ID=g5335.t1;Parent=g5335;Name=g5335.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 9056 10138 . - . ID=g5335.t1.exon1;Parent=g5335.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 9056 10138 . - 0 ID=cds.g5335.t1;Parent=g5335.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS exon 8354 8881 . - . ID=g5335.t1.exon2;Parent=g5335.t1 NODE_1330_length_12062_cov_42.4962 AUGUSTUS CDS 8354 8881 . - 0 ID=cds.g5335.t1;Parent=g5335.t1 #PROT g5335.t1 g5335 MAGHLYAEFQPQLHMLGHRGEDVGMREPLPPLGNMGPVPIGPMGVMGGGGQQQPADVRPFACTVDGCTRRYKNARSVDAHVKEFHTPARQTRPYVCHVPDCGKRFTSSMALTRHATAHSSDTPYVCNYEGCGRTFKVQKSLRNHLSLVHTGAKPFVCGACGKSYVERAKLNRHLKNHKTYAQLEQELREMRDRHAENESELKRSVARLDKERRTLAAKLTAMASRSGEQGGHMQGQHQGQHPGSGGPGGKRGQKRAHEDDGGAGGVAGGMPGQHRLAGGDVCSWFEFDFPGVLSSALGDGFVRFVQRHRRAMEEARSAVMDGYLASQATKEAALTVADSPQQRFDLQQSLLISMQAFHLDQVRQLHAEQQELLRRFQIERLNRRPSGRAAPFELVDNRHDMDANNSNINSGSNNSNGNNSNLHHHHLGAHEGIQAHDNDDGVDGVDGVEGADGAASEDVAVQQQAKRARTDSGAVSATAHADEAEEGEGDGDDEEDGEDVEGDDDDEGDDGIEDGDGDGDTDDGDESAEGADDSGM* # PASA_UPDATE: g4659.t1, single gene model update, valid-1, status:[pasa:asmbl_5754,status:12], valid-1 NODE_3236_length_3943_cov_32.2068 . gene 139 3915 . - . ID=g4659;Name=g4659.t1 NODE_3236_length_3943_cov_32.2068 . mRNA 139 3915 . - . ID=g4659.t1;Parent=g4659;Name=g4659.t1 NODE_3236_length_3943_cov_32.2068 . five_prime_UTR 3899 3915 . - . ID=g4659.t1.utr5p1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . five_prime_UTR 3537 3576 . - . ID=g4659.t1.utr5p2;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 3899 3915 . - . ID=g4659.t1.exon1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 3409 3576 . - . ID=g4659.t1.exon2;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 3409 3536 . - 0 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 3115 3222 . - . ID=g4659.t1.exon3;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 3115 3222 . - 1 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 2714 2903 . - . ID=g4659.t1.exon4;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 2714 2903 . - 1 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 2496 2612 . - . ID=g4659.t1.exon5;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 2496 2612 . - 0 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 1519 2303 . - . ID=g4659.t1.exon6;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 1519 2303 . - 0 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 1152 1317 . - . ID=g4659.t1.exon7;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 1152 1317 . - 1 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 764 906 . - . ID=g4659.t1.exon8;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 764 906 . - 0 ID=cds.g4659.t1;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . exon 139 273 . - . ID=g4659.t1.exon9;Parent=g4659.t1 NODE_3236_length_3943_cov_32.2068 . CDS 139 273 . - 1 ID=cds.g4659.t1;Parent=g4659.t1;3_prime_partial=true #PROT g4659.t1 g4659 MSQLLSQAREQSLREAAVRSIELLGAAVAPARIKDGPPITFARRSEFITHALGFLTHERRATAPTPLRAMTLDALAALARLEPELPENVCVEVISSSLGALLELPLQCSNGILAETSAALDRLVDAVVRESSDSHRLVILLEGILPTLRMEEDFRRLRALGALRVMLRSFLALRQEALDEDASAVPPLPNLGRLCAHLVPRACESHVTIRADAVECISLLFKVDVALLSPEGDDSLLGGIRACDNLRGKFQQMALDAEDARRQAAQQASSSESTSSPTDGGTSTQPHVTAAVAWTPAFPSSDLGRMFATTLGQSDITALCFTLIEVSSDPIVAPCGSGTLATAAVVASVRGADLSHAVRGLLDALHKKLMSFPFPSAPAKTTPTPTPTDAYQSAGGDGVVREAPVDPLVALWRAGLGVLKSIAEHHREETVSELLQIDLPFDRAVTQMWCALGSHAGISPAVVDQLLKEMLTNQPFVDQIDQKGNRTGVREATRGPMAATCALCDVMLAEEIAQVLYEMQHKVLSGILLRIGACAGSVARGLDPSGQAIMALRQFIQRSGMAFIATELDHARAWESMSTPQFVRAVAVVT # PASA_UPDATE: g1511.t1, single gene model update, valid-1, status:[pasa:asmbl_436,status:3], valid-1 NODE_1114_length_13824_cov_41.7928 . gene 2382 6205 . + . ID=g1511;Name=g1511.t1 NODE_1114_length_13824_cov_41.7928 . mRNA 2382 6205 . + . ID=g1511.t1;Parent=g1511;Name=g1511.t1 NODE_1114_length_13824_cov_41.7928 . five_prime_UTR 2382 2466 . + . ID=g1511.t1.utr5p1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 2382 2603 . + . ID=g1511.t1.exon1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 2467 2603 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 2913 3064 . + . ID=g1511.t1.exon2;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 2913 3064 . + 1 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 3262 3377 . + . ID=g1511.t1.exon3;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 3262 3377 . + 2 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 3518 3571 . + . ID=g1511.t1.exon4;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 3518 3571 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 3868 4008 . + . ID=g1511.t1.exon5;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 3868 4008 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 4273 4341 . + . ID=g1511.t1.exon6;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 4273 4341 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 4588 4731 . + . ID=g1511.t1.exon7;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 4588 4731 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 5050 5145 . + . ID=g1511.t1.exon8;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 5050 5145 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 5380 5442 . + . ID=g1511.t1.exon9;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 5380 5442 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 5885 5954 . + . ID=g1511.t1.exon10;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 5885 5954 . + 0 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . exon 6084 6205 . + . ID=g1511.t1.exon11;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . CDS 6084 6163 . + 2 ID=cds.g1511.t1;Parent=g1511.t1 NODE_1114_length_13824_cov_41.7928 . three_prime_UTR 6164 6205 . + . ID=g1511.t1.utr3p1;Parent=g1511.t1 #PROT g1511.t1 g1511 MDARCVCIADMEAHARAHLPKSVYDYYASGANDGQTLRENSNAFQRLRFRPRMLRDVSSLDLSTTILGEKISMPICASPTAMQRMAHPDGESATGRASAHLNTCMILSSIATTSIEELAASAPNGLRWFQLYVYKDRALTERLVHRAEAAGFKALVLTVDTPLLGRREPDVRNEFKLPAHLRLANFDEMDFKSYGVQIANQDSGLAQYIASQFDRTLNWKDVQWLKSITKLPIVIKGILTGDDAMLAVDAGAAAILVSNHGARQLDGVPATIEALPEIVQAVRGRVEVYLDGGVRRGTDVLKALALGARAVFVGRPVLWGLAYNGQAGVEQMFKLLRDEIELAMTLAGCNKVSEIDSSLIVHESHYERLVSKL* # PASA_UPDATE: g1510.t1, single gene model update, valid-1, status:[pasa:asmbl_437,status:12], valid-1 NODE_1114_length_13824_cov_41.7928 . gene 274 1221 . - . ID=g1510;Name=g1510.t1 NODE_1114_length_13824_cov_41.7928 . mRNA 274 1221 . - . ID=g1510.t1;Parent=g1510;Name=g1510.t1 NODE_1114_length_13824_cov_41.7928 . five_prime_UTR 1104 1221 . - . ID=g1510.t1.utr5p1;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . exon 972 1221 . - . ID=g1510.t1.exon1;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . CDS 972 1103 . - 0 ID=cds.g1510.t1;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . exon 638 789 . - . ID=g1510.t1.exon2;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . CDS 638 789 . - 0 ID=cds.g1510.t1;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . exon 274 388 . - . ID=g1510.t1.exon3;Parent=g1510.t1 NODE_1114_length_13824_cov_41.7928 . CDS 274 388 . - 1 ID=cds.g1510.t1;Parent=g1510.t1;3_prime_partial=true #PROT g1510.t1 g1510 MASIVVRGSRVLRADGSILPGTVFVEDGKIVRISDQLEAAEGFKVVDAGDNLVMPGIVDSHVHINEPGRTMWEGFETATRAAAAGGVTTIIDMPLNSIPPTTTVDNLKWKLDASNGQLWVDVGFWGGVIPNNH # PASA_UPDATE: g1512.t1, single gene model update, valid-1, status:[pasa:asmbl_438,status:3], valid-1 NODE_1114_length_13824_cov_41.7928 . gene 6231 10782 . - . ID=g1512;Name=g1512.t1 NODE_1114_length_13824_cov_41.7928 . mRNA 6231 10782 . - . ID=g1512.t1;Parent=g1512;Name=g1512.t1 NODE_1114_length_13824_cov_41.7928 . five_prime_UTR 10671 10782 . - . ID=g1512.t1.utr5p1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 10668 10782 . - . ID=g1512.t1.exon1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 10668 10670 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 10437 10493 . - . ID=g1512.t1.exon2;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 10437 10493 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 10086 10188 . - . ID=g1512.t1.exon3;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 10086 10188 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 9797 9921 . - . ID=g1512.t1.exon4;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 9797 9921 . - 2 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 9366 9476 . - . ID=g1512.t1.exon5;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 9366 9476 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 8873 8947 . - . ID=g1512.t1.exon6;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 8873 8947 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 8562 8690 . - . ID=g1512.t1.exon7;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 8562 8690 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 8187 8283 . - . ID=g1512.t1.exon8;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 8187 8283 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 7771 7960 . - . ID=g1512.t1.exon9;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 7771 7960 . - 2 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 7450 7546 . - . ID=g1512.t1.exon10;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 7450 7546 . - 1 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 7148 7202 . - . ID=g1512.t1.exon11;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 7148 7202 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 6779 6933 . - . ID=g1512.t1.exon12;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 6779 6933 . - 2 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . exon 6231 6606 . - . ID=g1512.t1.exon13;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . CDS 6472 6606 . - 0 ID=cds.g1512.t1;Parent=g1512.t1 NODE_1114_length_13824_cov_41.7928 . three_prime_UTR 6231 6471 . - . ID=g1512.t1.utr3p1;Parent=g1512.t1 #PROT g1512.t1 g1512 MGQNQSGLPGQGGPGRKDDKDKKEKKKYEPPAPTTIGKRKKKRKGPDAANKLPQVMPHTRCRLRLLKQERIKDYLLMEEEFIRNQERLKPQEEKNEEERVKVDELRGTPMGVGTLEEIIDDNHAIVSSAVGPEYYVSILSFVDKDQLEPGSSVLLHNKVLSVVGVLGDDVDPMVSVMKLEKAPTETYADIGGLDQQVQEIKESVELPLTHPEYYEEMGIRPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIEFPLPDEKTRRRIFTIHTNRMTLAEDVNLEEYITAKDDLSGADVKAICTEAGLLALRERRMKVTADDFRKSKENVLYRKNEGHPEGLYL* # ORIGINAL: g1513.t1 original gene structure, not modified by PASA NODE_1114_length_13824_cov_41.7928 AUGUSTUS gene 11582 12836 . - . ID=g1513;Name=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS mRNA 11582 12836 . - . ID=g1513.t1;Parent=g1513;Name=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS exon 12618 12836 . - . ID=g1513.t1.exon1;Parent=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS CDS 12618 12836 . - 0 ID=cds.g1513.t1;Parent=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS exon 12223 12321 . - . ID=g1513.t1.exon2;Parent=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS CDS 12223 12321 . - 0 ID=cds.g1513.t1;Parent=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS exon 11582 11782 . - . ID=g1513.t1.exon3;Parent=g1513.t1 NODE_1114_length_13824_cov_41.7928 AUGUSTUS CDS 11582 11782 . - 0 ID=cds.g1513.t1;Parent=g1513.t1 #PROT g1513.t1 g1513 MDEARDGLAVCADGSSGAHCEEVPPKAKVTWTHEDVAGKESVMRYVASVLTSHRDALVGNEAFCKIASFATLRMSPEMVTDPLMATVFSLQAAQMGADLNPLSVCADLSSAIVLFSNASVARLYGPLFRTAAEGAQSIRGQLGEGDASGYAANIASLADSLVALYAASQTAA* # PASA_UPDATE: g6070.t1, single gene model update, valid-1, status:[pasa:asmbl_7035,status:12], valid-1 NODE_4159_length_2097_cov_40.9243 . gene 329 1436 . - . ID=g6070;Name=g6070.t1 NODE_4159_length_2097_cov_40.9243 . mRNA 329 1436 . - . ID=g6070.t1;Parent=g6070;Name=g6070.t1 NODE_4159_length_2097_cov_40.9243 . five_prime_UTR 1332 1436 . - . ID=g6070.t1.utr5p1;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . five_prime_UTR 1003 1145 . - . ID=g6070.t1.utr5p2;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . exon 1332 1436 . - . ID=g6070.t1.exon1;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . exon 901 1145 . - . ID=g6070.t1.exon2;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . CDS 901 1002 . - 0 ID=cds.g6070.t1;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . exon 329 598 . - . ID=g6070.t1.exon3;Parent=g6070.t1 NODE_4159_length_2097_cov_40.9243 . CDS 329 598 . - 0 ID=cds.g6070.t1;Parent=g6070.t1;3_prime_partial=true #PROT g6070.t1 g6070 MVRENKQMPLHKVIMVGSGGVGKSALTLQFMYGEFVEDYEPTKADSYRKKVTLDGAECQIDILDTAGQEDYAAIRDNYFRTGEGFLCVFSITEKQSFLDSQDFRDHIIRVHDNDKIPFILIGNK # ORIGINAL: g8353.t1 original gene structure, not modified by PASA NODE_2784_length_5130_cov_24.3982 AUGUSTUS gene 364 1070 . + . ID=g8353;Name=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS mRNA 364 1070 . + . ID=g8353.t1;Parent=g8353;Name=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS exon 364 431 . + . ID=g8353.t1.exon1;Parent=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS CDS 364 431 . + 0 ID=cds.g8353.t1;Parent=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS exon 682 768 . + . ID=g8353.t1.exon2;Parent=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS CDS 682 768 . + 1 ID=cds.g8353.t1;Parent=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS exon 989 1070 . + . ID=g8353.t1.exon3;Parent=g8353.t1 NODE_2784_length_5130_cov_24.3982 AUGUSTUS CDS 989 1070 . + 1 ID=cds.g8353.t1;Parent=g8353.t1 #PROT g8353.t1 g8353 MASKNSKISDGTLGQMFVLVGQYKGEVVALKKLEIETVEVTKQLLVEIRAVREAQHENINRFVGLCIDPGQITMLSGE* # ORIGINAL: g10317.t1 original gene structure, not modified by PASA NODE_1390_length_11629_cov_41.15 AUGUSTUS gene 2931 4276 . + . ID=g10317;Name=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS mRNA 2931 4276 . + . ID=g10317.t1;Parent=g10317;Name=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 2931 3393 . + . ID=g10317.t1.exon1;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 2931 3393 . + 0 ID=cds.g10317.t1;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 3713 3775 . + . ID=g10317.t1.exon2;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 3713 3775 . + 2 ID=cds.g10317.t1;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 3924 3975 . + . ID=g10317.t1.exon3;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 3924 3975 . + 2 ID=cds.g10317.t1;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 4120 4276 . + . ID=g10317.t1.exon4;Parent=g10317.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 4120 4276 . + 1 ID=cds.g10317.t1;Parent=g10317.t1 #PROT g10317.t1 g10317 MAAANRNRPAWYEALHIPGRTEGRSQPCFKNNMSPFGSHFSSDSGFLHAHSSESATRTDTTQGDVDEDDSGKDAVSHTTKSPLKSATPQVTESMDYEDSQQLPTSGCDGAIPSADATEAEHAEKDAASSEREGEGKEEGVGIDKDETKAGVLNGSADEGEQSVQTHYATLKEHVAAAQAASEEFYGRWHHCSGELESLMPAYARFLNDASSAAVRLENDLVCVRARMRTALTGMEGLIRGMSPN* # ORIGINAL: g10316.t1 original gene structure, not modified by PASA NODE_1390_length_11629_cov_41.15 AUGUSTUS gene 102 1558 . + . ID=g10316;Name=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS mRNA 102 1558 . + . ID=g10316.t1;Parent=g10316;Name=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 102 354 . + . ID=g10316.t1.exon1;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 102 354 . + 2 ID=cds.g10316.t1;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 539 676 . + . ID=g10316.t1.exon2;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 539 676 . + 1 ID=cds.g10316.t1;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 859 1063 . + . ID=g10316.t1.exon3;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 859 1063 . + 1 ID=cds.g10316.t1;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 1307 1558 . + . ID=g10316.t1.exon4;Parent=g10316.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 1307 1558 . + 0 ID=cds.g10316.t1;Parent=g10316.t1 #PROT g10316.t1 g10316 ASDINTVLGDPSVNAVIITVPTHHHHDLICAALEKRVAVFVEKPVAESVAMISHCFDVAAINSTPLLCGFQRRFDPSYVKLRERVLAGDIGRVHTVHCVMRDHPLPSLEFLKSGGDAFLDLAVHDIDFIRYLLEANPSAVFARGKSLHPELRKLKVHDTALVHMEFPEEIMATIELSRGSCYGYDQRIEVFGDKGMLQVTNPTSTHVTHAGAGGVSTDVYVHSFPQRFSEAYDNELAHFADIVLRGANPIVRRDDCIYSVLIAEAAGVSSDSGRLVPIGSN* # PASA_UPDATE: g10318.t1, single gene model update, valid-1, status:[pasa:asmbl_1444,status:3], valid-1 NODE_1390_length_11629_cov_41.15 . gene 4486 7537 . - . ID=g10318;Name=g10318.t1 NODE_1390_length_11629_cov_41.15 . mRNA 4486 7537 . - . ID=g10318.t1;Parent=g10318;Name=g10318.t1 NODE_1390_length_11629_cov_41.15 . five_prime_UTR 7352 7537 . - . ID=g10318.t1.utr5p1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 7286 7537 . - . ID=g10318.t1.exon1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 7286 7351 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 6951 7118 . - . ID=g10318.t1.exon2;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 6951 7118 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 6701 6781 . - . ID=g10318.t1.exon3;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 6701 6781 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 6337 6482 . - . ID=g10318.t1.exon4;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 6337 6482 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 5878 5986 . - . ID=g10318.t1.exon5;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 5878 5986 . - 1 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 5489 5596 . - . ID=g10318.t1.exon6;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 5489 5596 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 5046 5186 . - . ID=g10318.t1.exon7;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 5046 5186 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . exon 4486 4897 . - . ID=g10318.t1.exon8;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . CDS 4742 4897 . - 0 ID=cds.g10318.t1;Parent=g10318.t1 NODE_1390_length_11629_cov_41.15 . three_prime_UTR 4486 4741 . - . ID=g10318.t1.utr3p1;Parent=g10318.t1 #PROT g10318.t1 g10318 MASAIAQSKEYASFRNSVARKTIIVDHGRREYREWFIYEHGPKDSPCPIIFLPPASGTADVYFYQMLTLGAQGYRTISVEFAPYFSHSKFCEGMAKFLEQQKIPRAHFFGASLGGFLAQKFAEQNEGNGRVVSLFLCNSFVDTASFKDMPYTGLHFFLPAFMLRRIVMSNFPEHDVEARIADSIDFMVERLELLQQPVLASRLALNCEEGYIAPQTLANVPITVMDVFDECAIAPKVRDEVLKCFPHSKQAHLKCGGNFPYLSRADEVSMHLKVHMRQFEDAGFDGAGPSTSPAEEDSFVGGADAGVRPTAADKGKRRQSGVER* # ORIGINAL: g10319.t1 original gene structure, not modified by PASA NODE_1390_length_11629_cov_41.15 AUGUSTUS gene 9344 10937 . + . ID=g10319;Name=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS mRNA 9344 10937 . + . ID=g10319.t1;Parent=g10319;Name=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 9344 9584 . + . ID=g10319.t1.exon1;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 9344 9584 . + 0 ID=cds.g10319.t1;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 9833 9979 . + . ID=g10319.t1.exon2;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 9833 9979 . + 2 ID=cds.g10319.t1;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 10137 10268 . + . ID=g10319.t1.exon3;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 10137 10268 . + 2 ID=cds.g10319.t1;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS exon 10744 10937 . + . ID=g10319.t1.exon4;Parent=g10319.t1 NODE_1390_length_11629_cov_41.15 AUGUSTUS CDS 10744 10937 . + 2 ID=cds.g10319.t1;Parent=g10319.t1 #PROT g10319.t1 g10319 MSGKCVLGPLLCGRSSSREGASSGLQMEASSVPLAVVPTVVDGGPQRVRSHVNALRYAMQQNCEGDILSSLEALRRATENDTPGDIENRKVAGSSGVLQAVCTLLRECFGRPRVLEAGLAALRFITKGDGTNIQHATASGAVALTIDAMRKHPGEGAVQRYACMAIRSLTFNHPDNQREVVERGAAALVVLAMRNHRCDPAIQAAACMAIQNMTWLVGASSYFVVLFNFQSCCVPAV* # ORIGINAL: g12986.t1 original gene structure, not modified by PASA NODE_4957_length_1116_cov_43.6609 AUGUSTUS gene 11 1116 . - . ID=g12986;Name=g12986.t1 NODE_4957_length_1116_cov_43.6609 AUGUSTUS mRNA 11 1116 . - . ID=g12986.t1;Parent=g12986;Name=g12986.t1 NODE_4957_length_1116_cov_43.6609 AUGUSTUS exon 11 1116 . - . ID=g12986.t1.exon1;Parent=g12986.t1 NODE_4957_length_1116_cov_43.6609 AUGUSTUS CDS 11 1116 . - 0 ID=cds.g12986.t1;Parent=g12986.t1 #PROT g12986.t1 g12986 ICLTFDENYSVGAIALINSTILHCSRPHALVFHIVTHDKVDSALRDSLHEHFPEPEFSFSTLDVTHVRAATVWAAYRAASLGKPIVFALYVLPALFPTLDRLVYLDQDVLVTRDIAPLHDMDLEGHPIAAARLCRESALFGKQLDMRQPELAQLNPMQCSLNNGVLVYDMNKWRRANYTAQLFWWTRLNNERKLYKLGSQPPFNLVFGRNYKLLDKYWNMMDLAGRSDQYGPTTAAVHDVLDSAIIHWNGQFKPWMCSEGFYAELWRQYFLGYREAVAPLSAEVKRQVCDAAVITDLDLRLDDPTSQFTVIITSHLRVDNLAGIANHLLRSDYVKEILLVWNNARGPCPTAVQGLMRCLPQTHNYVHN # ORIGINAL: g5951.t1 original gene structure, not modified by PASA NODE_2482_length_6105_cov_38.7847 AUGUSTUS gene 640 2097 . + . ID=g5951;Name=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS mRNA 640 2097 . + . ID=g5951.t1;Parent=g5951;Name=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS exon 640 790 . + . ID=g5951.t1.exon1;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS CDS 640 790 . + 0 ID=cds.g5951.t1;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS exon 1379 1450 . + . ID=g5951.t1.exon2;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS CDS 1379 1450 . + 2 ID=cds.g5951.t1;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS exon 1603 1766 . + . ID=g5951.t1.exon3;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS CDS 1603 1766 . + 2 ID=cds.g5951.t1;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS exon 1978 2097 . + . ID=g5951.t1.exon4;Parent=g5951.t1 NODE_2482_length_6105_cov_38.7847 AUGUSTUS CDS 1978 2097 . + 0 ID=cds.g5951.t1;Parent=g5951.t1 #PROT g5951.t1 g5951 MDVAVDLQRLSACESVSVHHMPFAVKGSGQAKVSSFFFPKKDASAAPGSTDIFEASFRGRLLRGTTVDLPENFTGIVIREDRTPLTDGEERTARPSATFGAISYWNLETPPTPNDPLVKALQWLDVAGAMSSPSVVVLSIVLSSSPSHSTSTFALWLRSPTFHRSTIQ* # ORIGINAL: g2900.t1 original gene structure, not modified by PASA NODE_5884_length_688_cov_86.7047_potentialcontaminant AUGUSTUS gene 1 654 . - . ID=g2900;Name=g2900.t1 NODE_5884_length_688_cov_86.7047_potentialcontaminant AUGUSTUS mRNA 1 654 . - . ID=g2900.t1;Parent=g2900;Name=g2900.t1 NODE_5884_length_688_cov_86.7047_potentialcontaminant AUGUSTUS exon 1 654 . - . ID=g2900.t1.exon1;Parent=g2900.t1 NODE_5884_length_688_cov_86.7047_potentialcontaminant AUGUSTUS CDS 1 654 . - 0 ID=cds.g2900.t1;Parent=g2900.t1 #PROT g2900.t1 g2900 MEEGRVVIPPTWRPTPLIPLGHSRAQDYRAWTNLRAYYARFDWNGMYESYFDLIGAPPKPSLESLAESLLEQHGINNEFVGDFNKFLDSESNEWMRWFDPMASGSFGKIAKEWRLKTGLTTEFEEAPIDFNELSAVGRKGALEAYTEIWGKSITGGTATLRAEKAEAVKRYVNRMIKERGPASYDPLALNKSPDFVQELEKEWSDIVGVRTYRDFIET # PASA_UPDATE: g5117.t1, single gene model update, valid-1, status:[pasa:asmbl_8190,status:3], valid-1 NODE_55_length_48751_cov_65.0265 . gene 29465 31211 . + . ID=g5117;Name=g5117.t1 NODE_55_length_48751_cov_65.0265 . mRNA 29465 31211 . + . ID=g5117.t1;Parent=g5117;Name=g5117.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 29465 29507 . + . ID=g5117.t1.utr5p1;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 29924 29947 . + . ID=g5117.t1.utr5p2;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . exon 29465 29507 . + . ID=g5117.t1.exon1;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . exon 29924 30106 . + . ID=g5117.t1.exon2;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . CDS 29948 30106 . + 0 ID=cds.g5117.t1;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . exon 30402 30505 . + . ID=g5117.t1.exon3;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . CDS 30402 30505 . + 0 ID=cds.g5117.t1;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . exon 30897 31211 . + . ID=g5117.t1.exon4;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . CDS 30897 30975 . + 1 ID=cds.g5117.t1;Parent=g5117.t1 NODE_55_length_48751_cov_65.0265 . three_prime_UTR 30976 31211 . + . ID=g5117.t1.utr3p1;Parent=g5117.t1 #PROT g5117.t1 g5117 MVQRVTYRRRLAYNTPSNRIRKVKTPGGRLVAQYTKKQGTIPKCGDCGLKLAGVTALRPKRYMSVSKPQKSVSRAYGGSRCAHCVRERIVRAFLIEEQKIVKRVLKAQDVKKA* # PASA_UPDATE: g5121.t1, single gene model update, valid-1, status:[pasa:asmbl_8191,status:12], valid-1 NODE_55_length_48751_cov_65.0265 . gene 45755 48748 . + . ID=g5121;Name=g5121.t1 NODE_55_length_48751_cov_65.0265 . mRNA 45755 48748 . + . ID=g5121.t1;Parent=g5121;Name=g5121.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 45755 45916 . + . ID=g5121.t1.utr5p1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 45755 46032 . + . ID=g5121.t1.exon1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 45917 46032 . + 0 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 46203 46315 . + . ID=g5121.t1.exon2;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 46203 46315 . + 1 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 46461 46526 . + . ID=g5121.t1.exon3;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 46461 46526 . + 2 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 46867 47131 . + . ID=g5121.t1.exon4;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 46867 47131 . + 2 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 47356 47502 . + . ID=g5121.t1.exon5;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 47356 47502 . + 1 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 47758 47872 . + . ID=g5121.t1.exon6;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 47758 47872 . + 1 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 48074 48217 . + . ID=g5121.t1.exon7;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 48074 48217 . + 0 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 48421 48474 . + . ID=g5121.t1.exon8;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 48421 48474 . + 0 ID=cds.g5121.t1;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . exon 48719 48748 . + . ID=g5121.t1.exon9;Parent=g5121.t1 NODE_55_length_48751_cov_65.0265 . CDS 48719 48748 . + 0 ID=cds.g5121.t1;Parent=g5121.t1 #PROT g5121.t1 g5121 MLKMAFSLGARAAIVLAVLLAASMPAFALYEDQAGLFDWHKRLVGVPFAVAFGDRHIYVATESSAVAALHSTTGDVAWRHILGESENEGIDALVHSGNAVISLSGGRRYLRRWDDATGSLNWEVLLFSLSQRDAVAGDIRRRGHSSGVAPAVVVGNKKSVAVVSGQSLQLRRVVDGSLAWTATLSQGCPSWSLAAADSEVIVAVCASSDGSSLSYAVVDASNGAMKTQGAAQLSSGVVLPSLANVAVLSANRIIVVASTGAVFSVAIGESGADVTSSGTIPTLPSSGNVILASVGGRALVTFSASEVSVIIDADGSVARRFEGRASVSSGLKIASASASKFESTHTRTG* # PASA_UPDATE: g5112.t1, single gene model update, valid-1, status:[pasa:asmbl_8189,status:3], valid-1 NODE_55_length_48751_cov_65.0265 . gene 9072 16135 . + . ID=g5112;Name=g5112.t1 NODE_55_length_48751_cov_65.0265 . mRNA 9072 16135 . + . ID=g5112.t1;Parent=g5112;Name=g5112.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 9072 9259 . + . ID=g5112.t1.utr5p1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 9370 9416 . + . ID=g5112.t1.utr5p2;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 9072 9259 . + . ID=g5112.t1.exon1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 9370 9488 . + . ID=g5112.t1.exon2;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 9417 9488 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 9601 9750 . + . ID=g5112.t1.exon3;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 9601 9750 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 9908 10655 . + . ID=g5112.t1.exon4;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 9908 10655 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 10888 10994 . + . ID=g5112.t1.exon5;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 10888 10994 . + 2 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 11118 11330 . + . ID=g5112.t1.exon6;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 11118 11330 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 11483 11701 . + . ID=g5112.t1.exon7;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 11483 11701 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 11859 12152 . + . ID=g5112.t1.exon8;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 11859 12152 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 12300 12518 . + . ID=g5112.t1.exon9;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 12300 12518 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 12638 12856 . + . ID=g5112.t1.exon10;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 12638 12856 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 12996 13217 . + . ID=g5112.t1.exon11;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 12996 13217 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 13342 13569 . + . ID=g5112.t1.exon12;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 13342 13569 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 13813 14184 . + . ID=g5112.t1.exon13;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 13813 14184 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 14387 14626 . + . ID=g5112.t1.exon14;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 14387 14626 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 14863 15084 . + . ID=g5112.t1.exon15;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 14863 15084 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 15308 15523 . + . ID=g5112.t1.exon16;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 15308 15523 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . exon 15670 16135 . + . ID=g5112.t1.exon17;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . CDS 15670 15900 . + 0 ID=cds.g5112.t1;Parent=g5112.t1 NODE_55_length_48751_cov_65.0265 . three_prime_UTR 15901 16135 . + . ID=g5112.t1.utr3p1;Parent=g5112.t1 #PROT g5112.t1 g5112 MADFVDETVETVAAVQTNGDVPRTEPVAVPTYDELFPPLVSSGDSAHKPVAKWGSSGSSAAASSFSIPLSTVTQVFHVPVDEQRYKQLRDKNSGEKSQAEICREVQSKTNVTIELSLSRSQTLSIVVSGKPDNVLKARKMLLQKLQTQLTLEVAVPKQHHKYILGKGGKKLAELCESTATKILVPKQEEETDIIKIVGTKENAEKARHEIVLIATEQDKLAVERLHIPKMFHTLIAGEGSSRVKQLMTDYGIKIHMPPPSVESDEIVVAGEKDGVAKAAAALLSDYEEKKRTTRQLSVKLAKKQHKYIIGPRGRNLKEILRTTGVDIKMPPLEDPTAEEIIIFGNELKLAMALNLVIEKANSITQDEVSAPKWIHRHIIGKKGANIKQLSEENPDVHIQFSDEKNAIELEGPPAEVAKIKAQLNHTVSELLAKTAYAEIKVDRQFHRHIIGKGGSTIGKIKDETNTNVQIPSDEENSDVITIEGEPAGVEKAKKEILELAKKLADERAVEVKIDQRFHKSIIGAGGHGARDIGDQFGVVLLFPPKVGERGREGRTAAPAAAAAPAAKKEEVVNRADIVTIKGPKDKVEKAKAHLEKLAKELVTLNYTVEVPIFKKFHKHVIGKGGATIRRIKEETNTRISIPADDADSDLVEIVGKKEDVEAARDKINAIQNELADVVNEDISIPSKFHNTIIGRKGRLVRAIMEECGGVQIRFPKEGAKSDKVSIRGPKDDVEKAKQQLLELATEKALNGHTVEIAVPNELHRHIIGRGFATSRKISEETGARLSFPRKNDEDANIVTIIGKEADVKAAQAKVEAIIKDLENIVSDEIHVPAKFHRFFVSNRGHVVREISDEFGGVTISFPKAEAAADKAEIVSLKGGKEFVHKAKARIAELVDEQANRVKLAVVIPNEHHRRFLSNGRTDVRRIEEQLRVLINFPKIKPKVVAEKKEGDDAAIPSEEDVLDTPAKPEDEAEAKQAEDDAAAAAEEAPAVNTIEPSTDKADIVTIVGKKENAEKARDELLGLVPVSVEVHIPLDYHRFIIGAGGKGIRSVMEDYGVGVRFPNAKHQSDVVVIRGLRENVDKARVQLEKRVAELDQDKAEREKRNFKLDIEVDPRHHSHIIGRKGEAVLRLKTEHDVRINFPKKGDDKSPVISLVGYQTSVEACRDEILQMVKDLDSQVTLEVRIDPRLHRRLIGAKGARVREMMDEFGGVQIKFPREENSDRVVIKGARDFAEEARDALVDLAEEFAIEQELEEEERRNQREQRDRERERNTSAGRRNEPGFSVRGAPWTAAPPKVDDAAAFPSMNGADGKSSRAPVWVKPQ* # PASA_UPDATE: g5113.t1, single gene model update, valid-1, status:[pasa:asmbl_8183,status:3], valid-1 NODE_55_length_48751_cov_65.0265 . gene 16188 20367 . - . ID=g5113;Name=g5113.t1 NODE_55_length_48751_cov_65.0265 . mRNA 16188 20367 . - . ID=g5113.t1;Parent=g5113;Name=g5113.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 19476 20367 . - . ID=g5113.t1.utr5p1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . exon 19286 20367 . - . ID=g5113.t1.exon1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . CDS 19286 19475 . - 0 ID=cds.g5113.t1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . exon 18826 19008 . - . ID=g5113.t1.exon2;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . CDS 18826 19008 . - 2 ID=cds.g5113.t1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . exon 17289 18597 . - . ID=g5113.t1.exon3;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . CDS 17289 18597 . - 2 ID=cds.g5113.t1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . exon 16188 17163 . - . ID=g5113.t1.exon4;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . CDS 16644 17163 . - 1 ID=cds.g5113.t1;Parent=g5113.t1 NODE_55_length_48751_cov_65.0265 . three_prime_UTR 16188 16643 . - . ID=g5113.t1.utr3p1;Parent=g5113.t1 #PROT g5113.t1 g5113 MLTSAHIAAAPATATPTVARTPNASAALSLLSPLDNVFATNYDGLDLHWDGGLEFASINNTPFSEQSKIKAEPLGGIWSTIPTIDFEDAADRTPACASQQSGAEQASVLSSLQPDYGPQFLSLGSESSWLDQPGLPAANSAILPAPDAAPSAASQPIPPPPPMPARAHIPAKITALRRKSPPFGTLDKVLKSYPLAHGQDSAVNNALYAAANDKKMHPRARSISVPALNCTSALVAPTQVRRGRPPKSALPTNTDPSAVPSVAGIVGRPAGVAKVTKAAAGRKRAQSTSAALSVLDMKQFSFLGDLSKSMGAPVGRRASSANVPQAQGLHGMMISPLAVAGGVADLGERADAQGWSSQGTHVDRALHGHITVKMESPEMTPSVLDAVSSGNVSPASKEVDGFDSGFCGSACDSPTRSRALTPVQMSLTATATSALAAGLGLNIDLGIDVSADCASVHEPTSPRHLQVKKGDALSEGSDSARGASPCSNSDDTDMLDAECKDDLHMHMGCGLAAGDLSGQREFQCPVAGCGKRYSRSSHYQTHSRSHTGEKPFMCSYDGCHRQFSRSDELTRHFRKHTGQKPFECSYCSRRFSRSDHMATHMRRHTGEKPFPCTWPMCPKRFARSDELSRHLAIHKKKGLAMQAAALAASKSGVAVKGGRGPAKGRPVPQHQQQQQHQHQHSHQLHQSGLVRSDNSAGMNLSVKMGSFSPSNAMSVLSSAASVLSNTPSPLVSL* # ORIGINAL: g5120.t1 original gene structure, not modified by PASA NODE_55_length_48751_cov_65.0265 AUGUSTUS gene 41966 45359 . - . ID=g5120;Name=g5120.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS mRNA 41966 45359 . - . ID=g5120.t1;Parent=g5120;Name=g5120.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 42364 45359 . - . ID=g5120.t1.exon1;Parent=g5120.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 42364 45359 . - 0 ID=cds.g5120.t1;Parent=g5120.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 41966 42107 . - . ID=g5120.t1.exon2;Parent=g5120.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 41966 42107 . - 1 ID=cds.g5120.t1;Parent=g5120.t1 #PROT g5120.t1 g5120 MPQVTRAVLALIACLFFFANAASSVESGARVHRVLRGAGGLTTAPTVTLPRKTVYIDYRDVDWVDGDKTVVAAVDAGYNVVILSLFLVSSNEGPTDMAVVWEQLPAERQIAAVNYAHSKGAIVMVSAGGGTDIPWAKYSAGEQYGVLVGNWAKHNNLDGVDFDLENVDPGFTSRLGLSAEQMVSYFVAASVAAKQFVQYVSHAPRASYFGRVGNANSFAGTTGGYTAVDVKAGKAIDWYHVQFYNQDGGCYTSFKGIFVTSASDCKSYPGSSVSEIVSYGVALEKVTIAKFLLENDGWSGYVSSVKLARMLLRARIELGYIGGIASWMYAAGESEQWLRVVLGERLPADAPGAVTSNPTALPAPGDLPATEVSEEVVLTKAPTLTLPRKAVYINYRDVDWSDGDLTVMKAVDAGYNVIIIAFFLVSIPEMGAFDFALVWEQVSTERQIAAVNYAHSKGAIVMVSAGGSTENPWVQFRTGKPYGQFAGQWAKNNNLDGIDFDLENLDMGFVTRDGMSAKELVKFMVSASVAAKEFVRYVSHAPQAPYFGRVGDARSWAGVTGGYTGVEIEAGDAIDWYNVQYYNQGATCYTTYAGLFVSSASDCPQFPGTSVAELAAFGIAAEKITVTKYLSESDALNGYISSSDLAGMLAQARTEIGYKGGISCWMYEQGPSEVWLDGIYPRLRPSGAPSGAPSGVSIVSGQKTKGLRPTDLDSSPTTVLTPTPTLTLPRKAVYIDYRDVDWSNGDLTVMKAVDAGYNVIIIAFFLVAIPEMGAFDFALVWEQVSTERQIAAMNYAHSKGAIVMVSAGGSTENPWVQFRTGKPYGQFVGQWAKNNNLDGVDFDLENLDMGFVTRDGMSAKELVKFMVSASVAAKEFVRYVSHAPQAPYFGRVGDARSWAGVTGGYTGVEIEAGDAIDWYNVQYYNQGATCYTTYAGLFVSSASDCPQFPGTSVAELAAFGIAAEKITVTKYLLKSDALNGYISSSDLAGMLARARTEIGPSGAPSGVSIASGQTTAAAHSTTAATPLRSKVAEDPVRRGSPNIPQ* # PASA_UPDATE: g5118.t1, single gene model update, valid-1, status:[pasa:asmbl_8185,status:3], valid-1 NODE_55_length_48751_cov_65.0265 . gene 31383 33925 . - . ID=g5118;Name=g5118.t1 NODE_55_length_48751_cov_65.0265 . mRNA 31383 33925 . - . ID=g5118.t1;Parent=g5118;Name=g5118.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 33785 33925 . - . ID=g5118.t1.utr5p1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 33294 33925 . - . ID=g5118.t1.exon1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 33294 33784 . - 0 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 32867 33089 . - . ID=g5118.t1.exon2;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 32867 33089 . - 1 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 32287 32731 . - . ID=g5118.t1.exon3;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 32287 32731 . - 0 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 32000 32123 . - . ID=g5118.t1.exon4;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 32000 32123 . - 2 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 31702 31792 . - . ID=g5118.t1.exon5;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 31702 31792 . - 1 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . exon 31383 31505 . - . ID=g5118.t1.exon6;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . CDS 31443 31505 . - 0 ID=cds.g5118.t1;Parent=g5118.t1 NODE_55_length_48751_cov_65.0265 . three_prime_UTR 31383 31442 . - . ID=g5118.t1.utr3p1;Parent=g5118.t1 #PROT g5118.t1 g5118 MAVVAAQGDPSRTKSTRFQSSQIQIQHERPQRGTTSHPNMLEMPPKASVPTSSQSTSTNARRSKSDRVKTATDALGFEDEIARLRNQTKMNFKVLAWEAASVHKSEQRQGHHAAMRVESGKRNESDAAVTTHAQGTGDSVGRAKPNQKGIGGQNSRHADEERPRPPIRPMSKAEVPRAISSLDDHVPMPHMHTRLRSAEVADGIARKHTVPAKEGSNSGPGGAITPLMIYNLASNAIKVGVSDAFKLEPSHRHDDAHTTTDRPQPSPSKWESPVAYKHRIVSVNGNSRDNNTLVAVDDSRAKSDAGAGGDEHTRTHSDEQRETEESTSGHRHGDEMDDTVRQLDALVRFRESNYDECCSALGRWYELESAVAEERKAEKRRLQMPTEDKSYTVDSMLHAYPVHDTHATIGLCEEVATDAPVVTEKRVRVGIPRSVVLQPMPRPPLPAWPSKDTMSLRKHCSRGNEFGPSIGMRRAPQR* # ORIGINAL: g5114.t1 original gene structure, not modified by PASA NODE_55_length_48751_cov_65.0265 AUGUSTUS gene 22755 24508 . + . ID=g5114;Name=g5114.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS mRNA 22755 24508 . + . ID=g5114.t1;Parent=g5114;Name=g5114.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 22755 23276 . + . ID=g5114.t1.exon1;Parent=g5114.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 22755 23276 . + 0 ID=cds.g5114.t1;Parent=g5114.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 23540 24508 . + . ID=g5114.t1.exon2;Parent=g5114.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 23540 24508 . + 0 ID=cds.g5114.t1;Parent=g5114.t1 #PROT g5114.t1 g5114 MDSSLTSMDWLQHMSVNKVMRPGAFLDGGSPHHGSPSTTHAKIAHSKSSPIGAYQPAPHTPVRQSLSMGSAPAHSVSSSVQAAAANAQSAKNVAPLVGLGEQYKFKMPPEEFVLTDKLPEGMVIGENGKPAYSYATLIAYAINDVPDRKLTLNEIYKWIIDKFPYYKDAGNGWKNSIRHNLSLNKCFIKVPRTKDDKGKGSYWTIDPNPPADADILAHIPPPPVSRPLHKRRKSRNPSVDATPYGPGNEHPVVAAILAKDSTGVINRRKGSRQSSSSHSGDMVDTNPLFDDLSASFKHLYRSVVETNQQQQKHAQNMTLQQQMQQYHSLQNQFSNYDGSSFDDGSLSPGTIPDSPLVVQGTAMNILDPRADGFGISMGASMRSDVVDWIAEDANLTDLAFSFNNLFSQSGRLRIEGADATAAAAHAMAGGHLGTLNHAGLGALGISGMGLSAIMGTGAGGAPQAVPVGRPSVQSNGSGVPGLDEEEEDDFDWASIM* # ORIGINAL: g5119.t1 original gene structure, not modified by PASA NODE_55_length_48751_cov_65.0265 AUGUSTUS gene 34109 39548 . - . ID=g5119;Name=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS mRNA 34109 39548 . - . ID=g5119.t1;Parent=g5119;Name=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 38481 39548 . - . ID=g5119.t1.exon1;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 38481 39548 . - 0 ID=cds.g5119.t1;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 38120 38304 . - . ID=g5119.t1.exon2;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 38120 38304 . - 0 ID=cds.g5119.t1;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 36347 37828 . - . ID=g5119.t1.exon3;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 36347 37828 . - 1 ID=cds.g5119.t1;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 35266 36108 . - . ID=g5119.t1.exon4;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 35266 36108 . - 1 ID=cds.g5119.t1;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 34109 35066 . - . ID=g5119.t1.exon5;Parent=g5119.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 34109 35066 . - 1 ID=cds.g5119.t1;Parent=g5119.t1 #PROT g5119.t1 g5119 MAAMLGSRSTTEFFFNAGRHDAADRNDLASSSIPYDQRPVANLVNKMDWSKTAMRCPKDLWPAPLRTAVNIMLASPFPICVYWGEDLCSVYNDAFSDILDPDKRTWSIGRPYGEMLPEIASEMVPMLLCVRRTGIAMSSEHKRILLKKSGYMREIFVTFTCGPIFLDDGTVGGVFNTCFDLTERMLSERRLRVLSELATDMQHVHTAADACTQMGRTLATRCSDVLYPIVYVVENACLVRVFPPTKCAEKNSFLVASNWPESLPIGTGWSECEELDAHSRGDHVGGADGTYANNANTDASDCRVDGQGTVGECMQRNASGLRACIASGEAVVVGREHKAGTAVVLPAKLPGVRGERTAAILVCGINEHLQLDRQYSEFFDLVLAHLKTALVNAEIVKEACARAEALKELDRQKTEFFSNISHEFRTPLTLMLGPIEDMLTPERASLYSQSTIEELRLVRRNGQRMLKLVNMLLDLSCMEAGMHIPIAEPMDLSTTTAEIASLFESAANRMGLTLMVDSPPLSSLVSVDRDMYEKILVNLLSNALKFTSHGQIVVTVRDVDETSVSVAVTDTGHGIAASDIPRLFQRFRRLYTTTARSHEGTGIGLSLVRELVSLHGGTINVESELERGTTFTVMLPRAQATDTIIASSPASKERRLNAFPKHPKVHNGMSIAEQHVAEAHAWEHHAAREPAVGSGGNFSNEFVELSGFGHAPAGVVGTAATAGAHISGVKSVKSVKSMDLEAAGSCSNNNNNNNNNNNNNSAVRRRTSDAFLPRSSSSRSGSEHMATADDGISNHDDTVTDRPYRVLLVDDNGDMRQYMSHLLSTHFDVCALPNGVAALEELRHMDVLPDVVIADVMMPGLDGFQLLEKIRGDERLQTLPVILLTARGEEAARIGARELGADDYIVKPFSGKDVLARVAVHARMSRLRNLIAARDGLLLRLTTQIASNAPLAHIVECAVRGVRSITGAARVEVVTTPLAPTTLHALSGCPATTPPDVCTPIDDVLHGRPWGEMRVWTLPDAAVKGLNVIPPSWGSRSREVCVGPSSAWLQSIVQQTALALGIGGMRDNLAREVEGQMTGLRAANEAKSRFLASLSHELRTPLTPVLLIADEMRGDLSIPADIRERFEVVYRSTLLEVGLIDDLLDLSRLESGKTVLRLETLDVQEVIRDVFAIVKQDFDDKRITVRLKLETPRAKVRADGVRLRQVFWNIARNAAKFSPEGTGLVVISTYIEEGPGELLEDGVGASPVAITAAPIPYIVATFKDNGIGIEPHLCTEIFEAFKQGGHDIAEKFGGLGLGLSISRSLVRLHRGTIEAVSDGIGHGCTFIVRLPLLATEDADKDNDGADSVVSPGILRATSYHREGCNDLHGVKSLTKTVPILLVEDNRTTARVVARMLQNKCGSDITVAASCGEAIEAFRRSNNGFEVVILDIGLPDGSGLDLFSQLRVLRPGLLGIALSGYCTQDDIRKSLDAGFSVHLGKPVKMAELCNVVHDVVAMAPTPESSASPSLFD* # ORIGINAL: g5111.t1 original gene structure, not modified by PASA NODE_55_length_48751_cov_65.0265 AUGUSTUS gene 424 7353 . - . ID=g5111;Name=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS mRNA 424 7353 . - . ID=g5111.t1;Parent=g5111;Name=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 7114 7353 . - . ID=g5111.t1.exon1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 7114 7353 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 6150 7016 . - . ID=g5111.t1.exon2;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 6150 7016 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 5776 5973 . - . ID=g5111.t1.exon3;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 5776 5973 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 5462 5611 . - . ID=g5111.t1.exon4;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 5462 5611 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 5069 5251 . - . ID=g5111.t1.exon5;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 5069 5251 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 4659 4833 . - . ID=g5111.t1.exon6;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 4659 4833 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 4344 4414 . - . ID=g5111.t1.exon7;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 4344 4414 . - 2 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 3997 4160 . - . ID=g5111.t1.exon8;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 3997 4160 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 3464 3731 . - . ID=g5111.t1.exon9;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 3464 3731 . - 1 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 2909 3214 . - . ID=g5111.t1.exon10;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 2909 3214 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 2330 2700 . - . ID=g5111.t1.exon11;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 2330 2700 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 1857 2037 . - . ID=g5111.t1.exon12;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 1857 2037 . - 1 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 1263 1600 . - . ID=g5111.t1.exon13;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 1263 1600 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 789 1020 . - . ID=g5111.t1.exon14;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 789 1020 . - 1 ID=cds.g5111.t1;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 424 579 . - . ID=g5111.t1.exon15;Parent=g5111.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 424 579 . - 0 ID=cds.g5111.t1;Parent=g5111.t1 #PROT g5111.t1 g5111 MASKGEGMTQLPPDVQAIIQATKLKAAAAALAAAPPVPQPPPPAPIPQSQPHSQPPQSVPHGTHVTPAKLDPEQYAKLCSMLNDLKASGKTSDPRFAKLFQIAQEYATLGPDYESVALSLSIIEKPVFQYGAQTQQNPVPVPTAPTPPAVMASTPSSTAAPNPTAASAAAAAPPSTDTDNTDTPIMIPVYFESGNEDWPNTPFTTNQLQQLKSQILAYKLVCRSQVITEALLKAIKGPNGIRTDSFAAVTPPSTTPIATPTQATALQKAKEPVGPAAVPAVKSMSIVEVVKDARQIIPAVPHLARLAPILKPAGLDPIMLLAEREYRVRERINLRVSALEELLAKSAEPDKTQLTIELKSLQLLELQKRLRAQIVGGMKTNTTLETMVDRGAYKRTKRQTLKEAKLTERLEKEQRRDQERRRKQRHLDYLNGIVQHAKEFKDFHRNAQARTSKLCKSVVQYHQNVEREGKKEQERLEKERLRRLMAEDEVGYRKLIDQNKDKRLTYLLNQTDEFIQKMIGAVKQHKKEEKHKLQTLTAMEKEKEKESEQEPDAAKAAKEAEAVKEAEAKEAEEEDSDNDEVIVNEAADEYQLNTDDNSKSYYMIAHTIAESIGDQPATLVHGKLKEYQFKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALICYLIEQKNMRGPFLIIAPLNVVSNWNLEFERWAPSVSKIVYKGSPAHRKMLQGEIRKANFNVLLTTYDYVMKDRYVLSKVPYKYMIVDEGHRMKNHDCKLTQTLIQYYKAPFRLLLSGTPLQNNLPELWSLLNFLLPSIFNSCNNFEQWFNAPFANYGEKVELRQEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKQEHVIRCEMSALQRQLYCHVQKKIVPTLVEDASTDGRPGKSTNGKTLQNTLMQLRKVCNHPFLFQPFEEQYAMHLGLGPRGISGPNIYRASGKVELLDRLLPKLKASGHRVLLFSQMTNLLNVLEDYFNFRGYKYCRLDGTTKSDDRSELLARFNAPDSPYFIFILSTRSGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLVTVNSVEEKILARAQYKLDVDEKVIQAGKFDNKSTAADRQAMLEALVMGLDDERDDSKEAESEIPEDDTLNQMLARADGEFEMFQRMDKERAESDRRELRPEDVFPRSLWNSKLHPERLIADVELPASLLKDVEDVEDLLSEDVNATLGKGFRERKQVSYNDGLTERQFLRAVESGNLEGAVEHKQRKRKRKEVEESAEQSPAPSSPADDPETPPEPPSKRRR # PASA_UPDATE: g5115.t1, single gene model update, valid-1, status:[pasa:asmbl_8184,status:12], valid-1 NODE_55_length_48751_cov_65.0265 . gene 24712 27317 . - . ID=g5115;Name=g5115.t1 NODE_55_length_48751_cov_65.0265 . mRNA 24712 27317 . - . ID=g5115.t1;Parent=g5115;Name=g5115.t1 NODE_55_length_48751_cov_65.0265 . five_prime_UTR 27254 27317 . - . ID=g5115.t1.utr5p1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 27103 27317 . - . ID=g5115.t1.exon1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 27103 27253 . - 0 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 26677 26930 . - . ID=g5115.t1.exon2;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 26677 26930 . - 2 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 26371 26457 . - . ID=g5115.t1.exon3;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 26371 26457 . - 0 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 25941 26075 . - . ID=g5115.t1.exon4;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 25941 26075 . - 0 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 25524 25805 . - . ID=g5115.t1.exon5;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 25524 25805 . - 0 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . exon 24712 25249 . - . ID=g5115.t1.exon6;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . CDS 24857 25249 . - 0 ID=cds.g5115.t1;Parent=g5115.t1 NODE_55_length_48751_cov_65.0265 . three_prime_UTR 24712 24856 . - . ID=g5115.t1.utr3p1;Parent=g5115.t1 #PROT g5115.t1 g5115 MAFRGAIFAAFVVSALVCACVAAQGGKRTLVLLNDHSIKQSHSIFFRSLNDRGYELTFSLADDASLALSKYGEQLYDNVILFSPGVDEFGGSVDVTSLLQFVDAGGNVLVAASSAISDPIREFASECGIEFDEEKTAVIDHFNFDAADKGDHTLIVADDVIKVEAIAGPKPVSSVLFRGIGLTFNKDSSLILPLVRASATAYSYFPDEKITTPPHAVGRDTVLVAAVQARNNARVVFSGSLELFSNNFFQSQARGKESGNRVFATELSSWLFHERGVLKIGAVSHRRVPDNVTPDVYTIMEDLEYSIEITELKNGQWVPYKATDVQLSFVRLDPWVRVFLAHDNKGKFSTTFKIPDVYGVYKLSIDYRREGYTYLEQATQVSVRPLRHNQYERFIVSAYPYYAGAFSMMAGLFVFALVFLNNRAPASEKPKQH* # ORIGINAL: g5116.t1 original gene structure, not modified by PASA NODE_55_length_48751_cov_65.0265 AUGUSTUS gene 27910 29104 . + . ID=g5116;Name=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS mRNA 27910 29104 . + . ID=g5116.t1;Parent=g5116;Name=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 27910 28044 . + . ID=g5116.t1.exon1;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 27910 28044 . + 0 ID=cds.g5116.t1;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 28180 28289 . + . ID=g5116.t1.exon2;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 28180 28289 . + 0 ID=cds.g5116.t1;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 28414 28554 . + . ID=g5116.t1.exon3;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 28414 28554 . + 1 ID=cds.g5116.t1;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS exon 28657 29104 . + . ID=g5116.t1.exon4;Parent=g5116.t1 NODE_55_length_48751_cov_65.0265 AUGUSTUS CDS 28657 29104 . + 1 ID=cds.g5116.t1;Parent=g5116.t1 #PROT g5116.t1 g5116 MKAVLILVTAAVLAASSTHADMFQAYGGSVVQFVGQSGQIKLYPATNSQRFLKIQMGSLSETTASGAPTSNKIAQFASSSFTWLNPIFTTVQDVYNQTVNATTVSFIDSTLLVQGAPIFFSMNTTMYIREVVIQSGNQTVRVPTGSLKFTIKISGWPFLDTNNKLEFSINVLTSGGRASLLRTPLVAGQARFLFDQTGFIDVLDTALVDELERPITSSAVTTGPITSLSFTFPYFASTLVYDPVIGVDASGAACGTAPSLFLAALLVLAVLLLSAIF* # PASA_UPDATE: g7305.t1, single gene model update, valid-1, status:[pasa:asmbl_1649,status:3], valid-1 NODE_1454_length_11199_cov_41.7358 . gene 5726 7789 . + . ID=g7305;Name=g7305.t1 NODE_1454_length_11199_cov_41.7358 . mRNA 5726 7789 . + . ID=g7305.t1;Parent=g7305;Name=g7305.t1 NODE_1454_length_11199_cov_41.7358 . five_prime_UTR 5726 5957 . + . ID=g7305.t1.utr5p1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . exon 5726 6045 . + . ID=g7305.t1.exon1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . CDS 5958 6045 . + 0 ID=cds.g7305.t1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . exon 6357 6551 . + . ID=g7305.t1.exon2;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . CDS 6357 6551 . + 2 ID=cds.g7305.t1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . exon 6945 7078 . + . ID=g7305.t1.exon3;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . CDS 6945 7078 . + 2 ID=cds.g7305.t1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . exon 7515 7789 . + . ID=g7305.t1.exon4;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . CDS 7515 7619 . + 0 ID=cds.g7305.t1;Parent=g7305.t1 NODE_1454_length_11199_cov_41.7358 . three_prime_UTR 7620 7789 . + . ID=g7305.t1.utr3p1;Parent=g7305.t1 #PROT g7305.t1 g7305 MSLRLVMFLACVAIASAARPVPFPKVNITDSSCYDNWSDCKSCVKDLGCAYCTDASDPQYSGYCGPVSVNTAVFKDTTVSGLCNLDNIKYGQCYVSANLVVIIVPSVIGGLVLIIAIAIYCCCRKRAARKHREYMDKAQADEERQAVARSERSDARKSERKAKTDEIRLKYNL* # ORIGINAL: g7304.t1 original gene structure, not modified by PASA NODE_1454_length_11199_cov_41.7358 AUGUSTUS gene 247 3977 . - . ID=g7304;Name=g7304.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS mRNA 247 3977 . - . ID=g7304.t1;Parent=g7304;Name=g7304.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS exon 890 3977 . - . ID=g7304.t1.exon1;Parent=g7304.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS CDS 890 3977 . - 0 ID=cds.g7304.t1;Parent=g7304.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS exon 247 617 . - . ID=g7304.t1.exon2;Parent=g7304.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS CDS 247 617 . - 2 ID=cds.g7304.t1;Parent=g7304.t1 #PROT g7304.t1 g7304 MAVRVGGPGAARVHETRQDADEDGDIATAFNEICLRRARLVDAALADIARQRSLLMQLTHAHLSDASSAHRTILRNPNTKVADNCDADASVVARADAAVHQARGELESARLEVASLRRLLVEAEGREEATARKLDAANHETDFVREQLHEEQSQRDELMKRIREFENREDDGLGQRRRDADSAKREKDAALAQLAECAHEREVLEDACAQLRLRLTDTREDGDRLSDECAEMRSEVSRLRNIVAEQRTAIQSLQDQIARDAGMNRRRSGRRSIIEGCVEHRAHTEALQSLRDTLNTEWELRWEARVAAERAQLASQVASLQCQLDDARDDYERLRVDLLLEVDVAKRQRDDARLQLEGLSVRVARVGEQEAPTTHRPADRRRQNKKRQSAVRRTGYQEIDYSSDSGAAAAVGGAGDGQGDDRSRGDRDVQSWLDAESAANDPSARYSARDHTRDHPQPPPSSVPHARRDDSFGDGCESSFATEDRGAGVGFGAATKQAAFVHASAVNSPLSQTPGMLFDTGAKSSAGNYQSHVPADAHNYNPQNAHAVAGSAEVPPPPPPPPAPPAPLIPRVPLFPPVKAADPQEGDKQTHEDYVHGAFPPPLASATEGPSKENVAPSKDPAADALAVLRRAIDARITAKLAASSKAEQQQTVGISAPVPPAQPVVIQNVMTRADMSGNGAATEATGAGIAEKAAKVALAPGMAEPRGDRREALSTPVAAVRTTAADTLRSPPPRLVVTDENGDATLTEGDIVAFNSFNSGTPVAASSPIHASDTETRVDHVPPPQARAPVTAPVTAPATAPVTAPVERAPDPILERLRRAHIVGPQVGVPLLKDIAAARSTLSTHSDKPGLAHAHRTGSFSSIASAASALTNNGNPPENTRKRKADADAASAMTRTESHAVPPGPRVQPLRRSRRRTSNGSNASNERSVELTRDSYDVHIAAIAESAAEQMAGDEQLFISGNAVAPIIEEAASVPPKAVFGQPGLYAQAPFEVALPAHTFVETTFMKRPLCLVCKRAIPLMKKGMKCSGCDAIVHTDCSRDLYPNCAMTHSGGKAPPSMSSSDSPLISKKRPRKDGVLLEKTANLPSENPKGTAKNAKKRVKIVPVFGATLEGIAESSGTVVPAVVTECIAAIESRALDERGIYRLSGTKSK # ORIGINAL: g7306.t1 original gene structure, not modified by PASA NODE_1454_length_11199_cov_41.7358 AUGUSTUS gene 9188 10330 . - . ID=g7306;Name=g7306.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS mRNA 9188 10330 . - . ID=g7306.t1;Parent=g7306;Name=g7306.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS exon 9671 10330 . - . ID=g7306.t1.exon1;Parent=g7306.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS CDS 9671 10330 . - 0 ID=cds.g7306.t1;Parent=g7306.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS exon 9188 9493 . - . ID=g7306.t1.exon2;Parent=g7306.t1 NODE_1454_length_11199_cov_41.7358 AUGUSTUS CDS 9188 9493 . - 0 ID=cds.g7306.t1;Parent=g7306.t1 #PROT g7306.t1 g7306 MRSPPQHLKTRAGPRMDAMSHAHHHMAAEDSPDESSDGLIPRPVTKVESHSASSQRRVHRGNSDADSGEAGAAEPDNAVAATTDDNSGAREDDEWAESAKETADHVIEGAEQVADAEGSNDNSAPSGTDLVTSIPLDPIMLFNPDEEAGVAEEESAGADGAPSDIGRDSRRASVSTAPGTRRQSVAGIMPAISLLPAAPMESADEESRSSLAEIAARREKNEEELARLASEEIHHAQTVVVIEKRRDSVINGTPMSKEDLAFLAKLEATGEDEEGEEGEEGKEGKEGEGVQSANEEAGERVEGGPPASGGADAEPQTPADV* # PASA_UPDATE: g12497.t1, single gene model update, valid-1, status:[pasa:asmbl_6246,status:12], valid-1 NODE_3584_length_3158_cov_43.144 . gene 1357 3052 . + . ID=g12497;Name=g12497.t1 NODE_3584_length_3158_cov_43.144 . mRNA 1357 3052 . + . ID=g12497.t1;Parent=g12497;Name=g12497.t1 NODE_3584_length_3158_cov_43.144 . five_prime_UTR 1357 1628 . + . ID=g12497.t1.utr5p1;Parent=g12497.t1 NODE_3584_length_3158_cov_43.144 . exon 1357 1772 . + . ID=g12497.t1.exon1;Parent=g12497.t1 NODE_3584_length_3158_cov_43.144 . CDS 1629 1772 . + 0 ID=cds.g12497.t1;Parent=g12497.t1 NODE_3584_length_3158_cov_43.144 . exon 2146 3052 . + . ID=g12497.t1.exon2;Parent=g12497.t1 NODE_3584_length_3158_cov_43.144 . CDS 2146 3052 . + 0 ID=cds.g12497.t1;Parent=g12497.t1;3_prime_partial=true #PROT g12497.t1 g12497 MQTIVKRVKRAMTIVEKFDVKKLDHNYKDKLQSQVPQNLHPELFGVRKTVSHGLPGRPTCASYDPVQSLLAVGTTRGEVRILGAPGVEFSLSRDDGMGVKFVLFVVNEGAVIAVHDNDRIDLWDLRGKEPSVVRTAQFKEPITCIRRAPNSRWLYIGTDKGNLHVLHLDTLLSCGYLVYWNHVIDVSRKTHPGKVVAIEEHPFEEGKLLVAHACGNVVLWDLKLKKVVRRYGSEQTNRGVTCASWHSEGSKFALGHDDGSMSVWQMKTEARPESSRNEPKASDAGRRHPISRLLFLSTASGEPFLIFSGGSARTDEVQYVTILQGKAEKVYCVDYQVIDMVATVQSPWAG # PASA_UPDATE: g12496.t1, single gene model update, valid-1, status:[pasa:asmbl_6245,status:12], valid-1 NODE_3584_length_3158_cov_43.144 . gene 327 554 . - . ID=g12496;Name=g12496.t1 NODE_3584_length_3158_cov_43.144 . mRNA 327 554 . - . ID=g12496.t1;Parent=g12496;Name=g12496.t1 NODE_3584_length_3158_cov_43.144 . five_prime_UTR 423 554 . - . ID=g12496.t1.utr5p1;Parent=g12496.t1 NODE_3584_length_3158_cov_43.144 . exon 327 554 . - . ID=g12496.t1.exon1;Parent=g12496.t1 NODE_3584_length_3158_cov_43.144 . CDS 327 422 . - 0 ID=cds.g12496.t1;Parent=g12496.t1;3_prime_partial=true #PROT g12496.t1 g12496 MGLSVEEWIDIAKQCKYLPENDLKKLCDIVIE # ORIGINAL: g9897.t1 original gene structure, not modified by PASA NODE_3029_length_4494_cov_39.0428 AUGUSTUS gene 193 4108 . - . ID=g9897;Name=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS mRNA 193 4108 . - . ID=g9897.t1;Parent=g9897;Name=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 3901 4108 . - . ID=g9897.t1.exon1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 3901 4108 . - 0 ID=cds.g9897.t1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 3451 3613 . - . ID=g9897.t1.exon2;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 3451 3613 . - 2 ID=cds.g9897.t1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 1387 3169 . - . ID=g9897.t1.exon3;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 1387 3169 . - 1 ID=cds.g9897.t1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 1005 1156 . - . ID=g9897.t1.exon4;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 1005 1156 . - 0 ID=cds.g9897.t1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 564 714 . - . ID=g9897.t1.exon5;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 564 714 . - 1 ID=cds.g9897.t1;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS exon 193 366 . - . ID=g9897.t1.exon6;Parent=g9897.t1 NODE_3029_length_4494_cov_39.0428 AUGUSTUS CDS 193 366 . - 0 ID=cds.g9897.t1;Parent=g9897.t1 #PROT g9897.t1 g9897 MAHAQTQDGGSVGADGDIGVFFNCFVQALEGHPLRKATYQFVILPDDEWLISVGDRGNVSATQEHADHPDCTIRTTLDDIVDVGDSRSSALRAVMSKRIAVEGNRGLLAQLVPYFKEASRRYSSAQNARDSVHDSVHGNGTVGGYASAHTHPAHAVVQVSATRLDNITFIDRKQWQPDTFAPHCSLCRSDFSFVRRRHHCRVCGRVACADCSARRIIGQRVCDTCHAQSLLHGGLAGLSEHSHPQQHASFSSYGGEHFSGVDSGAAYGQQQQHGVQGGEGRDPLTAAQDEHEPDPQHHHHHRRHHYQNRRGLSLTGFNSMPDFSVAAGDNVGGGGPEAGPRVSLATQTSALAAGAPLASAQTRMSSSAVEQTPIRSGSAAVAQSTVTTGAPRMLPSNSARPVLGASFSPAVAVGTSAPPQFRPQSQSQSQSQSQSQSQSSGSGSVSGSSRAHPSKRTGTASLDGAGSTRGIAGSHDLVSHSEAHIKSIQSMPIASHFDRIHRGNGATLAGQTPSSATGDDILSPTADAMQSVAFESEVDDLKSRLKDLQRRLRSVEARLTAAPSWFRAFVFAFGVVALAVALVAYAVVGHDAFVGALISPTLTVDGVVGYVQAGAEECVARVAAAAHTWMDYATDAEAIGLRLPGDVKLSVQGNYLRMPFAVLTTLLCAYVSFRFLARPALTLLLSAEEREMLVRRIIVYQLAIRVFGGYQLLKMRTKGKEGPEVNRLWSEAHSANAQKVRLATIELRGFWVKVGQYLSSRPDVLPEEWISELKTLQDEMPASGMDHVRRVIREDFNKEVTQLFATFEEEPIAAASIAQVHCATLHSGERVVVKVQHPRMATIMRQDMANLAVIMQGIAYFEPKFDFRPVIVEWSKE # PASA_UPDATE: g295.t1, single gene model update, valid-1, status:[pasa:asmbl_2094,status:12], valid-1 NODE_15_length_66359_cov_42.2841 . gene 1162 5444 . + . ID=g295;Name=g295.t1 NODE_15_length_66359_cov_42.2841 . mRNA 1162 5444 . + . ID=g295.t1;Parent=g295;Name=g295.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 1162 1191 . + . ID=g295.t1.utr5p1;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . exon 1162 1263 . + . ID=g295.t1.exon1;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . CDS 1192 1263 . + 0 ID=cds.g295.t1;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . exon 1499 2370 . + . ID=g295.t1.exon2;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . CDS 1499 2370 . + 0 ID=cds.g295.t1;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . exon 2492 5444 . + . ID=g295.t1.exon3;Parent=g295.t1 NODE_15_length_66359_cov_42.2841 . CDS 2492 5444 . + 1 ID=cds.g295.t1;Parent=g295.t1 #PROT g295.t1 g295 MRRFSLLALLVLAVAFAANSVSAEGEDAVPSGVPMPLSACDPNPCFNGATCVVNGDAFTCTCTRGFAGSLCQMRGPPPPPPPPPPPPTATPTPPTPPGPTPTPSETATPVPTATPTPTPAPVSPCDPNPCLNEGSCMEQMDGYMCMCKPGFTGMNCQRRATPPPPPPPPPPPPTPSPVDPCTSNPCKNGGMCASMAGSYVCTCPNGFMGQNCTTVDYCYQGPCQNGGNCTSMESGFMCACAPGFKGDRCNIDSCNPNPCLNRGSCSRAASTSGYACTCSNGFTGSRCEVPPNPCDPSPCQNSGNCSVVDGFAKCNPCQNSGNCSVVDGFAKCKCAPGWTGTRCNVEYDICLQAKPCFNNATCVRLGGLDYRCDCLTGYEGRTCKSVINPCSRASCGKFGMCVATGPNYGDFRCQCAPGYTGAQCEIPPNPCSPSPCQNSGNCSVVDGFAKCKCAPGWTGTRCNVEYDICLQAKPCFNNATCVRLGGLDYRCDCLTGYEGRTCKSVINPCSRASCGKFGMCVATGPNYGDFRCECNAGWTGEQCSVEIDQCALGVCKNYARCLKTKGNYTCFCRPGTSGRNCDVVPNSCLSAPCASGAVCEPSIFADSKCVCPAGKSGATCGDVAGQIYSLSKLSSIQVRSVSSSDLATISLSFRTLNPAGTLISHGTFALTVVGGDVLVSSGAAAVTIRAQNSGSFADGQWHTVSITAASASQRTVSVDGTSANIAYSSTAPQDVYIGDVPSNDVAGVAGCVKSVSFAGQALSTLAGVVFTKVSAGCPANEAFSFAGKSYVAYDASLAGSTSDITITFRTLAQQGRMLLAHQGVGNMLFSAYIDGGKLTFLLNLGRGSGELTLDYFVADGEWHTVTVSRARHIATIMVDNGVAAGTLRSLGNARNFVPIGPTYVGGNKKGSLDLVTGAPGFIGCISDVVINGNRMQVNSNGAVLLGVCSSAEIFSFGGNGYVQDATYSPKYGGSIQLRFRASSPNGIIAYGINRAGTIRDYYIVELVGGKIRAAFDAGINGFAEGFSGSNLADGQWHSLTYSRTNNDAMITVDGSAVAFHATGTAALLNIDAPFFLGGHPDVANGPARGSQSGVGFSGCISNVIVGARAAINGDAPTIRVNTLVGCPALQNDMSLVPQSMAAFNALPATSNGASSLRFAIRATFSVNTRPNQNVATAVAANGDSISIKFTNFAISVSASVGGASSSVQITNRPFVVDGMWHSVSLAIVGGKLQINVDDVATGSLNVSSFSPISLTFGSDTLEACIRDVTVNGQRLTAQSAALTGEVSSGCSAATGVYF* # PASA_UPDATE: g300.t1, single gene model update, valid-1, status:[pasa:asmbl_2096,status:12],[pasa:asmbl_2097,status:12],[pasa:asmbl_2112,status:12], valid-1 # PASA_UPDATE: g300.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2098,status:12], valid-1 NODE_15_length_66359_cov_42.2841 . gene 18679 23318 . + . ID=g300;Name=g300.t1 NODE_15_length_66359_cov_42.2841 . mRNA 18679 23318 . + . ID=g300.t1;Parent=g300;Name=g300.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 18679 18766 . + . ID=g300.t1.utr5p1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 19007 19008 . + . ID=g300.t1.utr5p2;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 18679 18766 . + . ID=g300.t1.exon1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 19007 19098 . + . ID=g300.t1.exon2;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 19009 19098 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 19248 19504 . + . ID=g300.t1.exon3;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 19248 19504 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 19686 19782 . + . ID=g300.t1.exon4;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 19686 19782 . + 1 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 19939 20046 . + . ID=g300.t1.exon5;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 19939 20046 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 20174 20809 . + . ID=g300.t1.exon6;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 20174 20809 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 20897 21808 . + . ID=g300.t1.exon7;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 20897 21808 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 21984 22538 . + . ID=g300.t1.exon8;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 21984 22538 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 22678 22783 . + . ID=g300.t1.exon9;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 22678 22783 . + 0 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 22931 23041 . + . ID=g300.t1.exon10;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 22931 23041 . + 2 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . exon 23284 23318 . + . ID=g300.t1.exon11;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . CDS 23284 23318 . + 2 ID=cds.g300.t1;Parent=g300.t1 NODE_15_length_66359_cov_42.2841 . mRNA 18679 23318 . + . ID=g300.t1.1.5b6be70a;Parent=g300;Name=g300.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 18679 18766 . + . ID=g300.t1.1.5b6be70a.utr5p1;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . five_prime_UTR 19007 19008 . + . ID=g300.t1.1.5b6be70a.utr5p2;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 18679 18766 . + . ID=g300.t1.1.5b6be70a.exon1;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 19007 19098 . + . ID=g300.t1.1.5b6be70a.exon2;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 19009 19098 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 19248 19504 . + . ID=g300.t1.1.5b6be70a.exon3;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 19248 19504 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 19686 19782 . + . ID=g300.t1.1.5b6be70a.exon4;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 19686 19782 . + 1 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 19939 20046 . + . ID=g300.t1.1.5b6be70a.exon5;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 19939 20046 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 20174 20809 . + . ID=g300.t1.1.5b6be70a.exon6;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 20174 20809 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 20897 21223 . + . ID=g300.t1.1.5b6be70a.exon7;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 20897 21223 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 21512 21808 . + . ID=g300.t1.1.5b6be70a.exon8;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 21512 21808 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 21984 22538 . + . ID=g300.t1.1.5b6be70a.exon9;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 21984 22538 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 22678 22783 . + . ID=g300.t1.1.5b6be70a.exon10;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 22678 22783 . + 0 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 22931 23041 . + . ID=g300.t1.1.5b6be70a.exon11;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 22931 23041 . + 2 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 23284 23318 . + . ID=g300.t1.1.5b6be70a.exon12;Parent=g300.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 23284 23318 . + 2 ID=cds.g300.t1.1.5b6be70a;Parent=g300.t1.1.5b6be70a #PROT g300.t1 g300 MDTLTLTVIATAVVVVAAAVVLGIFALKPKAKVITEPAKAQKTKGGQEPRKVDSGRSKDKTDASHEDDAAREERAAIKKRRAEEKLRAEEEKQKAELAARKRELEEAVRRQQEETKQRLENERRQREEQKKKAVEEEERLRKEKEERKARAAEEEAAAAAAKEEKKRRAKETEERERLAKEERVKREAEAKGKRDAEEKAKRDAEEKAKRDAEEKAKRDAEEKAKREAEAKKQAEEKAKRDAEEKAKREAEAKKQSEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEEAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAQREAEAQKQAEEKAKREAEEEANRAAAIALQNECARATTTAPAAVTVSSTVAPQTEEAFDFGTPIEDQQKAALFMQSRFRAKKGKTAPATADSETKQTAESAAPATATVATPVETPVAPPAESFDFGTPIEDQQKAALFIQSRFRAKKGKAVESPVKADTADTAVDVQKVSEAAVRHDLAQEETSLRLHREAVNSSPPTSVVLPVTDEAPKIVQQAEESFDFGTPIEDQQKAALFMQSRFRAKKGKTAPATADSETKQTAESAAPATATMATSVETPVAPPAELFDFGTPIEDQQKAALFMQSRFRAKKGKAVESPAKADTAVDAQKVSEAAVRHDLAQEETSLRLHREAVNSSPLARSSVPEPSAHLPASRAAPQPQVDLKVAHCAQLVSEALRAEAREWDSIGRASEQSAIAGVSADLRSELQAEESSLRFFRECRAAQEHSASVAAVSFASSAAGEHGQPANSPGSSSRGSSGAGGDEWVVLDDHASRSSQSGTASPFHFVSSATTGVTTSTRDLTASGRSTPTEEVRSDTSGVSPALSPSSSGLLLGGNRLPSSPGVVRAPMSPSVSLADGFKGLAGLSKKDNDSFTHVLHNKR* #PROT g300.t1.1.5b6be70a g300 MDTLTLTVIATAVVVVAAAVVLGIFALKPKAKVITEPAKAQKTKGGQEPRKVDSGRSKDKTDASHEDDAAREERAAIKKRRAEEKLRAEEEKQKAELAARKRELEEAVRRQQEETKQRLENERRQREEQKKKAVEEEERLRKEKEERKARAAEEEAAAAAAKEEKKRRAKETEERERLAKEERVKREAEAKGKRDAEEKAKRDAEEKAKRDAEEKAKRDAEEKAKREAEAKKQAEEKAKRDAEEKAKREAEAKKQSEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEEAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAKRDAEEKAKREAEAQKQAEEKAQREAEAQKQAEEKAKREAEEEANRAAAIALQNECARATTTAPAAVTVSSTVAPQTEEAFDFGTPIEDQQKAALFMQSRFRAKKGKTAPATADSETKQTAESAAPATATVATPVETPVAPPAESFDFGTPIEDQQKAALFMQSRFRAKKGKTAPATADSETKQTAESAAPATATMATSVETPVAPPAELFDFGTPIEDQQKAALFMQSRFRAKKGKAVESPAKADTAVDAQKVSEAAVRHDLAQEETSLRLHREAVNSSPLARSSVPEPSAHLPASRAAPQPQVDLKVAHCAQLVSEALRAEAREWDSIGRASEQSAIAGVSADLRSELQAEESSLRFFRECRAAQEHSASVAAVSFASSAAGEHGQPANSPGSSSRGSSGAGGDEWVVLDDHASRSSQSGTASPFHFVSSATTGVTTSTRDLTASGRSTPTEEVRSDTSGVSPALSPSSSGLLLGGNRLPSSPGVVRAPMSPSVSLADGFKGLAGLSKKDNDSFTHVLHNKR* # ORIGINAL: g296.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 6532 7421 . + . ID=g296;Name=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 6532 7421 . + . ID=g296.t1;Parent=g296;Name=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 6532 6669 . + . ID=g296.t1.exon1;Parent=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 6532 6669 . + 0 ID=cds.g296.t1;Parent=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 6978 7148 . + . ID=g296.t1.exon2;Parent=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 6978 7148 . + 0 ID=cds.g296.t1;Parent=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 7284 7421 . + . ID=g296.t1.exon3;Parent=g296.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 7284 7421 . + 0 ID=cds.g296.t1;Parent=g296.t1 #PROT g296.t1 g296 MINTFVLIKVLNMQGAFEECLSVFGKSKVVIFSNSAGSDDDKDYVQKPAGGEEAAAYLDCATTDIVCVGDRLLTDVVFGNSAGMLTVHTLAFSTANDNAMARLIRNLENDYLLPYFETRYTAPSHPRFTNGLCYMRHNRPFWEGAKRQ* # PASA_UPDATE: g304.t1, single gene model update, valid-1, status:[pasa:asmbl_2109,status:12], valid-1 NODE_15_length_66359_cov_42.2841 . gene 39079 56179 . + . ID=g304;Name=g304.t1 NODE_15_length_66359_cov_42.2841 . mRNA 39079 56179 . + . ID=g304.t1;Parent=g304;Name=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 39079 39252 . + . ID=g304.t1.exon1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 39079 39252 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 39461 39660 . + . ID=g304.t1.exon2;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 39461 39660 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 39826 40031 . + . ID=g304.t1.exon3;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 39826 40031 . + 1 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 40338 40417 . + . ID=g304.t1.exon4;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 40338 40417 . + 2 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 40659 40729 . + . ID=g304.t1.exon5;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 40659 40729 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 41122 41214 . + . ID=g304.t1.exon6;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 41122 41214 . + 1 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 41446 41740 . + . ID=g304.t1.exon7;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 41446 41740 . + 1 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 41865 42011 . + . ID=g304.t1.exon8;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 41865 42011 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 42326 42485 . + . ID=g304.t1.exon9;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 42326 42485 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 42753 42844 . + . ID=g304.t1.exon10;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 42753 42844 . + 2 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 43021 43162 . + . ID=g304.t1.exon11;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 43021 43162 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 43314 43528 . + . ID=g304.t1.exon12;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 43314 43528 . + 2 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 43696 43909 . + . ID=g304.t1.exon13;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 43696 43909 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 44148 44457 . + . ID=g304.t1.exon14;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 44148 44457 . + 2 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 44613 46302 . + . ID=g304.t1.exon15;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 44613 46302 . + 1 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 46557 46988 . + . ID=g304.t1.exon16;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 46557 46988 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 47242 47763 . + . ID=g304.t1.exon17;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 47242 47763 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . exon 47921 56179 . + . ID=g304.t1.exon18;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . CDS 47921 55870 . + 0 ID=cds.g304.t1;Parent=g304.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 55871 56179 . + . ID=g304.t1.utr3p1;Parent=g304.t1 #PROT g304.t1 g304 MPHAEDERKDFILHTAASAFGIGNVEDVSDSIYNSDEVDAFLDDTNANVLYLRHVPGEKKILVFNSTSAPEDGGDNHSLLLMKLQPKPITPQNMRECIQSMSMNDSPVSTFYHALNKVFAPLLLRDAKWSRKIDPKLQSLVSDLEAGLGSALRHAEPEASSKSHNGKGSKGRRGSDESDADSDDDKKKGKNANVNKFVGIQLPSQEIEYWAERQSQGSSTIARQQAAFFSEILQPIAKDLTDLNFVISFSERSGLSIAEVSELVQRINEVLYKLWTQSEHDPYPEARMRHFMSVIGGALGRYVQHKLGTIDLWTGHSVQVRDAIRGALSICAKWESVCDELTSDLWPREEAHQWTGKPYKDDFLINLAVRLEEVLAIRSAHDQLVQLVTSDERRSLGVDRALQAFSGLQPLHYNPYTQPMWENAKAEYERNMTPAEERIASRLSSEFKNSGGQQLLREFQRYRDLVTRPNIRRELATERETLLGQLSSYLKTVKEDFHLRSNQRAMPGREDSSSVGKNLPSLVSNLVWVRQLALKVDEVTQVARDLLGDLHGHGDFAESASDVLKRLRKHERELFEGWQKDVSHSLEDEDDSVQLQSNATVMTLEKHGGKLRVQYSERLVTLLREVRQLSALGFPIQAAILKTAATAQKFYRQGMILKQVAHFYNTIDQEMIASQQPLMLRTAHEFERIIKGSQSKGESLTIRWSDPPKEVDEYITKLQSVAEKLTTENRRLRKVHSAMAEKVIALMSLDVVQHRERWKAILSEMREMVAHLKGQGYEEEHMRPWLIHWDHQLYKALEYRYRFGLESLNENLPEIPVELVFKQGRLQFRPPIEEIRAKYYRETKKFITMPQTFTGVGDSPIFRKMTERNAGGFSIIYQKAEDLFARVVKVVDPFKEWVVLGMVDLETLVEWHMREVVDWERNFKMLKSKGREAEKLPNVVKVDCITVSTAPVKATIDDHMQRLYDAMLNSLRKAIQRHVDEVDAFVSRGMDALELRPQSVAEIGEANARHSELSREKANVKELFHYIELKNKLLRSVAGGGVEVNSVVSRWDRFELMLESHEMMIHDQVEVLKGQTVARTDNFRLELDKFTARWNQLKPKEVVMENRQAARATVDSLKERRAELDDLRKTAESLAQDSSHFGMDAPEFPDLDGVMRDVAAFESMWGFYEEFANGLDKLAQEDWISFRGKSFQFEDFLSEWKDKARARAPDAIGVHIVREAERYTDLLPHLKYVRGEVMTADHWGEMFRLLQYPRGTTLEKLTFGDILDKADAIVQNAASIKDIHSRAQGEVSIREAIQELEMWGAGATFQLTGYTDTNDANISLIKDWKDLMNQVGDNQSLLQSLKDSSYFGHFADKAQLWEQRMAELDEYLHNLNLIQRKWVYLEPIFGRGALPKEQGRFKHVDDDFRAIMHDISKDNRVLSLTNRSGIRDTLVALLDQLGRCQKALNEFLEEKRSKFPRFYFIGDDDLLEILGQSKNPAVIQSHLKKLFAGIHSVEFDDKASGARMSSVIAMRSLEGEVVPLRRPVQMTDDVEVWLDKLSDAMRHSLKDLLKQCLSASGAEDVRKFPSQILCLAEYIQFTKRCEEALGKNKLRKLHEELKTQLDVYTSTEFSEDSAETSVLELKLKSLILDIIHMVDVVESLMDVGVKTTDHWDWQRQLRYYEDNGACQASGRCLHSARIKMFDAEFKYTFEYQGNAARLVHTPLTDKCFLTLTQGMHMGFGGNPYGPAGTGKTESVKALGYAFGRQVLVFNCDEGIDVKSMGRIFIGLVKCGAWGCFDEFNRLDEAVLSAVSMQIQVIQAALKAKAPSADLLGRTVDVDPNSGIFVTLNPAGKGYGGRQKLPDNLKQLFRPVAMAAPDNELIAEVLFYSEGFKNAKELGRKLVSIFTLCRELLSPQQHYDWGLRALKTVLRAGGQLLQTYKRTKGRKVDEAMEAQLVVQGLRINTVSKLTYADSRRFDALVRDVFPDVPLSDIEYVDVAAALRATCEEMKLVVVENQIKKMLEFYEATRQRMGVVIVGPSGSGKSTLWRVLRAALQRLNRQVKQYTMNPKAMPKTQLLGQIDMDTREWFDGVLTYSARQVVKEPTDVQSWIVCDGDIDPEWIESLNSVLDDNRLLTMPSGERIQFGPNVNFIFETHDLSSASPATISRMGMIFLSDEDSDVKVLVQAWLRRQPEDLQSKLSSWIDDMFYKGLEWIHAQKDLVVDTTRVGVVMNGLTHFVGVKSKLEFVCALVRGLGANLGQESQSNFAKEAFKWAGEAPADARRPLDSYFDSRSGKLKSYALDMPNDLSVEQLYEQHVVRTADVQSALSLFSPWLEQKEPFLLVGPEGCGKSMLLRHCFESMRSVAVATVHCSAQTTPTHVLQKLYQTCIAISTNTGRVYKPKDTERLILYLKDLNLPKPDKWGTSQLIAFLQQAITYNGFYDSNLEWVGLENIQIVASMNPSTTLGRHPLTTRFTSIVRIACISYPERDQLQSIYAAYLRPVLAARVPHEPDWANPRKISALADSMVKVYEQTKAKFTVDDRSHYLFTPRDLTNWVMSLLRYDMSEGSIALVAAWAYEACRLFRDRIVGAEASEKFDNILGTILKSDFAHAGASAAAALREESVHVTWGATNAPTNDRTALHGRALGKLSHEDFSVIVLKGIRNLERETRELNLQLFPEVLDNVARVDRVLSRPGGSLLLAGRSGVGRRTAVTLVAHMHGTKLYTPHVARGYGPKAFAADLKNVLQTCGVLGEPAVLLLEDYQLVDPSFLECANSLLSAGEVPGLYSPEEIDPLLSPLKEQASVEGFRGSLFQYFVSRVRTNLHVVLIMDCANPSFIMNCESNPALYTNCAMQWLDGWTPAGMAQVPRMLLGTSDAVDHVSDKEAFYKHALHIHSSCASLGATPRMYIALLESYKTLYASKLGEKSKRLHHLSAGLSKLEEASGKVDELKQDANRRSVLMVEKQQEADQALLEITGAMEAASDQKKEMEVLREQLGQEERNMEKKKAGIDAELSSIDPIVQEARKAVGEIRGEDLSEIRSLRTPPEPIRDILSGVLRLMGIFDTSWNSMKTFLGKRSVKEEILQFDARKITDDISDKVKELLKERGQSFEEKTAKRASVCAAPLAKWVQANIKYYDVIKKIRPLEEENAELDKSLAKSRARLDKLEKALASVDQKVAELKDRFGKRTAEASELKYGLDKAREVLSAAESLIGKLLEEKERWETQVGQIRSDIKALPLYALVAAGFLTYLGRTPEDVRQSMVADWRAAVGLPNFDFRRFMTSESELLKWKAEGLPSDDLSMENAITILQTTRWPYIVDPSSAATEWLKTHLRAGGKLEVVNQQDANFTTQFELAVRFGKTLVVQEVDRIEPIFYSVIRRELIAQGPRFVVQIGEKLIDFNPEFRLFMATRNPSPEIPPDAASIITEVNFTITRAGLAGQLLGMTIQHEKPELEVRKSELLKTEDDLKVQVAELEDHLLQELATSEGNLLENKALIDSLNETKSKSSTITSSLAESHRLQKSLDAERDAYLPLARSGSTLFFVIGDLVKINHMYQFSLASFLLLFQRALRVEDSGAGTDSRIRLLSATLQQMVYETVSRSLFKADRLMFALHLVHGTQSHLFADKEWDVFTGQIVNVGTGDSLKKIQESLPSWIDADRAGAYSVLDTNFPQLMQALSLGDADLWSTWARSSQCEREFPSKVAKRVTPFQQVVVVHALRPDRLQSAMTQFAEQSLGLKELASPTLNLQKLHASETIAVEPILIIISPGADPSQELQDLAEATVGKDKYHQLAMGQGQSEAAMSLLHSCAKDGSWLCLKNLHLAIPWLSSLEKELKTMQPHKDFRLWMTTEAHGKFSSILLQSSLKVTYEAPPGLKRNLQRTYEMWTPEYIAKGSSVRAQALFVLAFFHGVLQERRSYVPQGFTKFYEYSSSDLRASSEILDRLCVGQEKPQWAFVHGLMENAIYGGRVDNSFDMRVLRTYVQQYFSPDLLGGGPSSSSSKGSRNRKLGGVLTLPTSAYHADYVSVIAELPENDRPSLFGLPPNIERSMQRTISDAVVGQLKVLMRQDAIADRFDREKWATELGPTLVLWKKLVGDNSDFLQQRLAPVTEDMPPVQAFVVQELSSSIALCKSVHSALASLSKVIRGSSLLTPSVQRLASALLRRQVPDVWEHRWEGPEDPLQWLRALVAKTQALGGWYEKASSKRLLDGQLDLADLFHPNTFLNALRQQTARAMKCSMDDLALTSSWRGGAVSGATISVTLGGLQIEGCNFDGSRMSETSRDSPSMSSVPPCAVAWVAKSSTNKDGQGLSLPLYLSSSREKLVTCLHVPCASGEESSWVLSSAAMFLKQI* # PASA_UPDATE: g297.t1, single gene model update, valid-1, status:[pasa:asmbl_2095,status:3], valid-1 NODE_15_length_66359_cov_42.2841 . gene 9079 10990 . + . ID=g297;Name=g297.t1 NODE_15_length_66359_cov_42.2841 . mRNA 9079 10990 . + . ID=g297.t1;Parent=g297;Name=g297.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 9079 9257 . + . ID=g297.t1.utr5p1;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 9379 9408 . + . ID=g297.t1.utr5p2;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . exon 9079 9257 . + . ID=g297.t1.exon1;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . exon 9379 9631 . + . ID=g297.t1.exon2;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . CDS 9409 9631 . + 0 ID=cds.g297.t1;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . exon 9746 10990 . + . ID=g297.t1.exon3;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . CDS 9746 10830 . + 2 ID=cds.g297.t1;Parent=g297.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 10831 10990 . + . ID=g297.t1.utr3p1;Parent=g297.t1 #PROT g297.t1 g297 MEAPIVSQAEGATAPESKPSTMPVSVEGEQVKTVTDSKVASPVQDSKDTQDGKVPLSNVPTPLERSNSLDSATTALVPSAMPPAEAPKTVETAESVSSVSSGDAAGTDAAKADSPANGQQPRSSCTYCGKQFYRIDRLNAHLRVHTGETPYQCSVPGCGKRFKENAALFKHVKSHSPSRPYQCNMCGTAFKLKHHLKRHKEKVHEIPADAPSAFPHPAQYPGHPAHYHQYQHMPRHDAPMYAGAAAQGRMYPVHARPTMYPHMGGQPQMMMRPPGEYAYEQYQPMQGQYPAQHPGFQAMAQPGGYPVNYAARPMGVTGPFSAGHGMVSGYDHRPPSASMQSFDGAASWNSSAGSGAQAWSNYGPPSSGAPAAHGAPASAGPAPVPYGGGSFDEQQQNSVRSSAVSNLSSRGSEAEQAAAFTISNLGNPNVARVAS* # PASA_UPDATE: g306.t1, single gene model update, valid-1, status:[pasa:asmbl_2093,status:3], valid-1 NODE_15_length_66359_cov_42.2841 . gene 59292 62951 . - . ID=g306;Name=g306.t1 NODE_15_length_66359_cov_42.2841 . mRNA 59292 62951 . - . ID=g306.t1;Parent=g306;Name=g306.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 62807 62951 . - . ID=g306.t1.utr5p1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 62702 62951 . - . ID=g306.t1.exon1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 62702 62806 . - 0 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 62368 62479 . - . ID=g306.t1.exon2;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 62368 62479 . - 0 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 62140 62211 . - . ID=g306.t1.exon3;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 62140 62211 . - 2 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 61852 61906 . - . ID=g306.t1.exon4;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 61852 61906 . - 2 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 61443 61544 . - . ID=g306.t1.exon5;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 61443 61544 . - 1 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 61151 61263 . - . ID=g306.t1.exon6;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 61151 61263 . - 1 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 60812 60900 . - . ID=g306.t1.exon7;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 60812 60900 . - 2 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 60551 60655 . - . ID=g306.t1.exon8;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 60551 60655 . - 0 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 60236 60316 . - . ID=g306.t1.exon9;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 60236 60316 . - 0 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 59820 59938 . - . ID=g306.t1.exon10;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 59820 59938 . - 0 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . exon 59292 59535 . - . ID=g306.t1.exon11;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . CDS 59406 59535 . - 1 ID=cds.g306.t1;Parent=g306.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 59292 59405 . - . ID=g306.t1.utr3p1;Parent=g306.t1 #PROT g306.t1 g306 MSANPHAAASPVETILQLATGHIVTSALLAAVSLKVADKLRNGPKSIDAICAEEPKSQPATTYRVLRALASVGIFRETTGADHVFENTEASALLDSGAPINLWNFVNHLDCEQFRAYGHFQDALTTGTSPFKAANGSEIWTFYKEHPDRAAVFHQAMFDNSMAQLPVILPAYDFGRHKTICDIGGGKATFLIKVLEAYPSVQKALNYDLPEMIEQEATPFLATLDSAVRSKIQTYKGSFLADAASTGIPTGADLYIMKHIIHDWSDTDSITILKNTRQAIGTNTDARLCVVEMVVPEGNAPGPAKIFDLHMMAMCSLSSDGQFARERTAAEFRDLLSKSGFAVQEIIPAGRVCIISAVPV* # ORIGINAL: g299.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 15833 16927 . - . ID=g299;Name=g299.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 15833 16927 . - . ID=g299.t1;Parent=g299;Name=g299.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 16746 16927 . - . ID=g299.t1.exon1;Parent=g299.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 16746 16927 . - 0 ID=cds.g299.t1;Parent=g299.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 15833 16559 . - . ID=g299.t1.exon2;Parent=g299.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 15833 16559 . - 1 ID=cds.g299.t1;Parent=g299.t1 #PROT g299.t1 g299 MEAFFLGGTAGMMATSIVQPLDLIKTRMQLASNQKGVAPRSLVSTAAAVVRHEGFGGFYNGLSAALFRQATYSTTRFGVFNACIEFAKAQQQQQNGSSALVTTSFAVKIGAGMVSGGIAAVVGTPAEVALVRMTADGRLPLEQQRNYKNVFDALIRVSREEGILTLWRGCGPTVSRAILLNAAQLGTYSEAKEILLKNGIMKDGIGCHLASSLVSGLAATTISLPADIAKTRIQDMKNGEYRSSLDCMVKIIRNEGFFKLWKGYPAFFARIGGHTVFTFIFLEQITALYKSARVASQPARMS* # PASA_UPDATE: g298.t1, single gene model update, valid-1, status:[pasa:asmbl_2106,status:3], valid-1 NODE_15_length_66359_cov_42.2841 . gene 12651 15131 . + . ID=g298;Name=g298.t1 NODE_15_length_66359_cov_42.2841 . mRNA 12651 15131 . + . ID=g298.t1;Parent=g298;Name=g298.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 12651 13040 . + . ID=g298.t1.utr5p1;Parent=g298.t1 NODE_15_length_66359_cov_42.2841 . exon 12651 15131 . + . ID=g298.t1.exon1;Parent=g298.t1 NODE_15_length_66359_cov_42.2841 . CDS 13041 14687 . + 0 ID=cds.g298.t1;Parent=g298.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 14688 15131 . + . ID=g298.t1.utr3p1;Parent=g298.t1 #PROT g298.t1 g298 MRVLPHQDAPRYQGPRNLAASGGGANHRFVRSESTDGTTLPGFVIRSESSLGYDRAPQSVQVSVTNGAAHTPRQCQYCGRAFSRSDRLHAHERTHTGEKPYVCKFEGCGKRFKENNARYKHMRTHSDRRPYECEGCDASFKLKHHLKRHALMVHSTEGESQSETTPPAAPMQQQSTKPGLKGPRSDSGISSDNASNSNTNSNNDGSSSIAGGNGSSLSGSNSNNSMSGSNSGGSNSGASPLGSMDDSASNVSGGSADNSNGSTRRSNGKKNRRRRRKRKSSSNGESAQSADSAGTNDDTQEAMECLDANGSANAPSGVSAYGGGGATGHANVRAPRRRHNGAHAQQQRGMVERRATSGRSDGVAASDGRTQQTDQQHVTRPHPHANAHAHQQPVAANQPLGGHFMRPQAHDVSFHASGLQAPNHGMSMQMQHQQQQQQQQQQHRSHVMMQQQARPQPPSQGAYSASSQPTMQPQPMLHRDPHSNQPRQWYPSGNASSGSSGSERTHGGGRRKRHHKKPSPTSPGMAHKRAAHGTKPQTSFMISDILGH* # ORIGINAL: g294.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 1 380 . - . ID=g294;Name=g294.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 1 380 . - . ID=g294.t1;Parent=g294;Name=g294.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 1 380 . - . ID=g294.t1.exon1;Parent=g294.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 1 380 . - 0 ID=cds.g294.t1;Parent=g294.t1 #PROT g294.t1 g294 MNRLFTAVFGSVSWHGGRIRTAVQVSLVVVLFAIATVLVWNSSASSRFRTLATSDSTATKLEETAVNSDYRLPSPVTQTVVDGAANSDLTLSGRDDIEGGVLLDDQEAEPYIPPLPLKWTTAWRDA # PASA_UPDATE: g305.t1, single gene model update, valid-1, status:[pasa:asmbl_2110,status:12],[pasa:asmbl_2111,status:12], valid-1 NODE_15_length_66359_cov_42.2841 . gene 57001 59046 . - . ID=g305;Name=g305.t1 NODE_15_length_66359_cov_42.2841 . mRNA 57001 59046 . - . ID=g305.t1;Parent=g305;Name=g305.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 58937 59046 . - . ID=g305.t1.utr5p1;Parent=g305.t1 NODE_15_length_66359_cov_42.2841 . exon 57001 59046 . - . ID=g305.t1.exon1;Parent=g305.t1 NODE_15_length_66359_cov_42.2841 . CDS 57497 58936 . - 0 ID=cds.g305.t1;Parent=g305.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 57001 57496 . - . ID=g305.t1.utr3p1;Parent=g305.t1 #PROT g305.t1 g305 MHRGSMAAPFLILPIEVLFVHIIPRLSTADVASLSHTNSFLRTQLRRMRTFTLHDNYAVHYFEDALFRSAVGKVIPKDRIVIDFYRTEVDLLCGLRSLSCVETTRAIDVSPLEGIHTLNLTASYVFDVSALGGVHTLILTNCPGVEDVSALGGVHSLDLRGCPRVVDVSTLGTVHTLDLSGCNGLSDVSALGGVRTLTLRGCIGVADVSALGGVYTLDLAACTGLSDVSALGGVHTLILTNCPGVEDVSALGGVHTLNLSHCSGVINVSALGGVHTLTLQGCVGVEDVSSLGGVHSLDLRGCPRVVDVSTLGTVHTLDLSGCTGLSDVSALAGVHTLILTNCPGVEDVSALGGVHTLNLSHCSGVVNVSRLGGVHTLNLRMCRGVVDVSALGGVHTLDLSYCSRVVDVSALGGVHTLNLQMCRGVVDVSALGGVHTLNLQMCGRVVDVSALGSAHTLDLSFCRGVADVSALGGVANLRR* # PASA_UPDATE: g301.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2092,status:3], valid-1 # PASA_UPDATE: g301.t1, single gene model update, valid-1, status:[pasa:asmbl_2091,status:3], valid-1 NODE_15_length_66359_cov_42.2841 . gene 23455 25886 . - . ID=g301;Name=g301.t1 NODE_15_length_66359_cov_42.2841 . mRNA 23455 25886 . - . ID=g301.t1.1.5b6be70a;Parent=g301;Name=g301.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 25814 25886 . - . ID=g301.t1.1.5b6be70a.utr5p1;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 25766 25886 . - . ID=g301.t1.1.5b6be70a.exon1;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 25766 25813 . - 0 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 25497 25565 . - . ID=g301.t1.1.5b6be70a.exon2;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 25497 25565 . - 0 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 25233 25294 . - . ID=g301.t1.1.5b6be70a.exon3;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 25233 25294 . - 0 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 24787 24894 . - . ID=g301.t1.1.5b6be70a.exon4;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 24787 24894 . - 1 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 24251 24439 . - . ID=g301.t1.1.5b6be70a.exon5;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 24251 24439 . - 1 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 23981 24065 . - . ID=g301.t1.1.5b6be70a.exon6;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . CDS 24035 24065 . - 1 ID=cds.g301.t1.1.5b6be70a;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . exon 23455 23774 . - . ID=g301.t1.1.5b6be70a.exon7;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . three_prime_UTR 23981 24034 . - . ID=g301.t1.1.5b6be70a.utr3p1;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . three_prime_UTR 23455 23774 . - . ID=g301.t1.1.5b6be70a.utr3p2;Parent=g301.t1.1.5b6be70a NODE_15_length_66359_cov_42.2841 . mRNA 23455 25886 . - . ID=g301.t1;Parent=g301;Name=g301.t1 NODE_15_length_66359_cov_42.2841 . five_prime_UTR 25814 25886 . - . ID=g301.t1.utr5p1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 25766 25886 . - . ID=g301.t1.exon1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 25766 25813 . - 0 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 25497 25565 . - . ID=g301.t1.exon2;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 25497 25565 . - 0 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 25233 25294 . - . ID=g301.t1.exon3;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 25233 25294 . - 0 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 24787 24894 . - . ID=g301.t1.exon4;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 24787 24894 . - 1 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 24319 24439 . - . ID=g301.t1.exon5;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 24319 24439 . - 1 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 23981 24065 . - . ID=g301.t1.exon6;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 23981 24065 . - 0 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . exon 23455 23774 . - . ID=g301.t1.exon7;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . CDS 23590 23774 . - 2 ID=cds.g301.t1;Parent=g301.t1 NODE_15_length_66359_cov_42.2841 . three_prime_UTR 23455 23589 . - . ID=g301.t1.utr3p1;Parent=g301.t1 #PROT g301.t1.1.5b6be70a g301 MAPSADHSSDATIQEQRDVRKSIEGQLDGHKGAVLFIEQVLLGQKPHIFILIGVVQLAFWFLATTTWTVVSIATVFAAIAVAADYGLAIISAASVSDGDASNTRFKAICADLAAVVIRFRHFRRVMDDLRTRSPLQVHRPLLTIPLRWHISLAVFCLRITWPWSAHRS* #PROT g301.t1 g301 MAPSADHSSDATIQEQRDVRKSIEGQLDGHKGAVLFIEQVLLGQKPHIFILIGVVQLAFWFLATTTWTVVSIATVFAAIAVAADYGLAIISAASVSDGDASNTRFKAICADLAAVVIRFRHFRRVMDDLRTRSPLQYMAMVGASLIAVGYLGNCISGLVLAYITAMAAIVYPAASANGLIAGVCERVSAVVSPIIDKLRIIVNRTRGIAPDAHHDVRPRKPSKAD* # ORIGINAL: g302.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 26468 28448 . - . ID=g302;Name=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 26468 28448 . - . ID=g302.t1;Parent=g302;Name=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 28330 28448 . - . ID=g302.t1.exon1;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 28330 28448 . - 0 ID=cds.g302.t1;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 28068 28188 . - . ID=g302.t1.exon2;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 28068 28188 . - 1 ID=cds.g302.t1;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 27781 27946 . - . ID=g302.t1.exon3;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 27781 27946 . - 0 ID=cds.g302.t1;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 27382 27520 . - . ID=g302.t1.exon4;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 27382 27520 . - 2 ID=cds.g302.t1;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 26468 26789 . - . ID=g302.t1.exon5;Parent=g302.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 26468 26789 . - 1 ID=cds.g302.t1;Parent=g302.t1 #PROT g302.t1 g302 MSTAADSDEDDDYMSGELLARLGDSVGASRLNPRDRREIKLQKEREERDRKHRETNKPRHVREAEERERGLSSAIGESNKGFAMMLKMGYKGGNALGKDGSGLVAPIAVSIKLDRGGLGADADRKRRAEEDARAAAERHSKRQRVTAETAESFVGRMRQTFDLKRLSRDVKKSESVCEQLDRREGVTGTEHLWPAEIRREERQRKRAAVARTTASRDDGFVASATAPGDADSDDDALSPTPERLSELTAYLRNRHLYCVWCGDAFESAEEMSAQCPGDTADAHEDDLD* # ORIGINAL: g303.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 29091 38274 . + . ID=g303;Name=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 29091 38274 . + . ID=g303.t1;Parent=g303;Name=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 29091 35070 . + . ID=g303.t1.exon1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 29091 35070 . + 0 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 35324 35343 . + . ID=g303.t1.exon2;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 35324 35343 . + 2 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 35535 35712 . + . ID=g303.t1.exon3;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 35535 35712 . + 0 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 36078 36229 . + . ID=g303.t1.exon4;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 36078 36229 . + 2 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 36948 37011 . + . ID=g303.t1.exon5;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 36948 37011 . + 0 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 37269 37290 . + . ID=g303.t1.exon6;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 37269 37290 . + 2 ID=cds.g303.t1;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 37617 38274 . + . ID=g303.t1.exon7;Parent=g303.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 37617 38274 . + 1 ID=cds.g303.t1;Parent=g303.t1 #PROT g303.t1 g303 MRGVVVVFSVVVFLTALAHSADGQTLVASLAAIPASIASGQTNIFVELDADTNLAGSVALTSASKTVSVTVRPKVSTKQPIVRCPRGSSALVLAGAGLRVSLTGIQFVDCDARVVVVKDASLTINQGAFRRNSGGALELSKKAVASILLSLFDSNSAVNGLTDNTLGADIYLHDSANATVAGCIFQRGTAERGGAIAAIGGAVLSASSCSFVSSSALQGGAFFASEAIVATFSRCNFTRVYALSSSPVVGTGDGGDGEVDPPMPMTCSPELESNADGDGFIDFRRRGSGSQPLSSAPLNPLGVLAGMARASRDSLLTLGSGGSVYVEGNAAVRMTSCNFTGSSAPYGGVASVQGDAALLMINASTAIDSSAPLGSGGFAIVSQGSRLVLSGCTLRNVSSLNTGGALRVEDGASAVLRDSTFQSGSASIGGFLHVVGGTSQIDAARCVFQGAVAGSGGLACSEQFGTLNMTDCSARELSALNTWGDLTMLSGGAGFNSYCGRVYVVRSQFSDMHSEADGGFVAAYGGKVEDFNSDCYLSSPRRRAAEGAALQGLRDRKKSRDSQGTSGDARDQHGHGSGSGDRTGRRVRLIAGDVSFTSCAISNVSSTLNGGAFSVSGTSGFLTLTNVTLRGAAAGGSGGAVSVRGEVNGKITVSIIRSTLTDTTAQGRGGTMAASSPVTCVVQGSLLARTSSLGDGGVVSLDYGGSVRISDVTVASARSGGYGGVFALAPSPDALFYFSAANVSTTDTWSAMGGGFISIVSNSDIADVGSTVSVVNAKVLRASSDGPGGALFLQRQASLVLSNSTFIDSSTLSTGAFALVANETTLVVQGTCFVLGGVGRGGAGALAIRGRAVIVGAANLSISRVVSRPFCGWLSAAQDVVEGLVAQGLSCTACTDMPEVGTVDAFRVAMGSPPLGSEVSLDGDLRLGSKSGLPDSPPGLVSGDVLAIFAAINEATVDHVIYVDADSPLSYAIVGSLACSKVLAVNRLVLRGTHALFGLTVFAFARTSNTWDGVGVTGGAPHITIAAGAYVELGGKESQNVVQFATPLRIEVLGVLRIQIIDVQSTVTITVRGGGTLVMEEPFVSAVLQVTVEDYGFFRVLRPRFTRTSVSGSVQNGGIALVEDNGVVELLGHAVDINWGTDVSMSSLSRGFGGAVAAGLKSTSLVRVFVDGVVAETGDMIYQENGGFMYLGGKSVAVVRNSRISGDSSGSGGCFYVDGEADLLLQDIADLTCLSTRGSGGAIYHGSLGRVVVRNVTVSSSSAVGDGGFAVIGRSARVAMQDGMELVIRRPTLLVSDTRVATTGSVAGSGGFIAVVGSALVTISRLRIDAAHADVQGGAISVRSVNDDPVQLDILESNFTSVMTLAGDGGFLHVNGRTVSVTVDACVIVDAVAWYHGGAVFVGHMSTLATLAVTRSTFIRSLVGTNGYGGCFALLEGVTTLENTTISDSLTGGSGGVIYAQGGALARLARVTIERASAGTKGMGGAVHLTETASMEMTDCAITAVEAGDAGGAFVLQYSVRLSARSLVVSRVSGSSGGVVAAGDDSTVLFEHVTIVDAVASSGDGGAFALSGTAAAVLTDVSVSGSRSSSRGGAVALANGTSLVAHGLRLSSCTADAEGGAIYSLGTSSLLLRDITVESSSSGGDGGCLYVGAANITVSNGRLSGCTAGTHLGGGSGGAALVAVSGLSSAFMQNVSIVGPSATVGPAIHLTTALSVNSSAALLHLAENDVRVTNARATYGSVALVSSTPARMRVSGALPKFTLAAANSAFEPFSVVLEDVYGNAAAVTPGNQLTVTLSVSPGSACSLTGRLTAVTDGDAHASFAGVGIVFTTGNWQEIASRGCRIVVSGLMSDVKHCASSGARRSALTAGVDSFVAADFGPDLAGSPSCGPSRALMAVSDGAGSSAYVCTSVAGSSSGAPVAVIAVSVVIPIVSAVALAVGMRLWVLKLRRERSQRSHIEFVEKHVTSDSNLAGMQIPRESVSLDEKLGEGEFGVVMRAQVCMDSRLRICAAKMLREFSTNEERTLFLAEAEIMVGLSHKNVLSLVGVVYIDEPMLVILEYMSHGSLKSFLARFTPAQRDLANVVNALTGLAAEVAEGMDYLAQHRIIHRVADFGLARNMTGDSDYYRKTKVGKLPYKWLSPEVLKRRVFATASDVWAFGILLYEIYSFGGTPYPGIANAEICAFLEMGRRVEQTAACSDDVYAVMMRCCETDPAARPSFATLAADLRDIRARAEALCCTSPNTHTQSVIAPLEKIPRLDGKRMSYNAYNSDSPHGGRVEVQHSYDNHVPATGIVSDHTYDNEVSGGVDEQHIQRQSMQPLIVPNDALDRHRPESPSDHFNMELEEVHVGDAGYMNC* # ORIGINAL: g307.t1 original gene structure, not modified by PASA NODE_15_length_66359_cov_42.2841 AUGUSTUS gene 64919 66011 . + . ID=g307;Name=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS mRNA 64919 66011 . + . ID=g307.t1;Parent=g307;Name=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 64919 65000 . + . ID=g307.t1.exon1;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 64919 65000 . + 0 ID=cds.g307.t1;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 65152 65174 . + . ID=g307.t1.exon2;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 65152 65174 . + 2 ID=cds.g307.t1;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 65401 65495 . + . ID=g307.t1.exon3;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 65401 65495 . + 0 ID=cds.g307.t1;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS exon 65981 66011 . + . ID=g307.t1.exon4;Parent=g307.t1 NODE_15_length_66359_cov_42.2841 AUGUSTUS CDS 65981 66011 . + 1 ID=cds.g307.t1;Parent=g307.t1 #PROT g307.t1 g307 MAVGGAFIALLLLCAAGVNFSVHRVEEGHVGVYYRGGALLSAISKPGIHFMLPFITTHKSVQVTLQTDEVRNVPCE* # ORIGINAL: g3071.t1 original gene structure, not modified by PASA NODE_5228_length_961_cov_48.5813_potentialcontaminant AUGUSTUS gene 2 928 . + . ID=g3071;Name=g3071.t1 NODE_5228_length_961_cov_48.5813_potentialcontaminant AUGUSTUS mRNA 2 928 . + . ID=g3071.t1;Parent=g3071;Name=g3071.t1 NODE_5228_length_961_cov_48.5813_potentialcontaminant AUGUSTUS exon 2 928 . + . ID=g3071.t1.exon1;Parent=g3071.t1 NODE_5228_length_961_cov_48.5813_potentialcontaminant AUGUSTUS CDS 2 928 . + 0 ID=cds.g3071.t1;Parent=g3071.t1 #PROT g3071.t1 g3071 DEPALNIHGVRLDRARAASAPVVFSSKKLPISGDEFASVEAITSLFGNASASVTTPAAALVFQLSTNTARRASDDIGGGPPAFTSPQLSGDALPNFSVFIQDSYGLAAFAPPTVPLAIRLTIKGNGTTTCTISGDLTRTFSRSSRVDYSNVRVSSSTVPVNCTIGVVPDNFLYSEGADLFKNMALQTVQLTSCSAGTSLQPDAAGLYSCVSLPVGAPTAAAASSTSSTLIVAVVVSVVVVCAGVFIVAFAIVRRNRRKWNMKQLEDFARHMESAQPDLAKLELPRDSVELQEVLGEGAFGVVHKAQVS* # ORIGINAL: g13770.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 16585 17417 . - . ID=g13770;Name=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 16585 17417 . - . ID=g13770.t1;Parent=g13770;Name=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 17406 17417 . - . ID=g13770.t1.exon1;Parent=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 17406 17417 . - 0 ID=cds.g13770.t1;Parent=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 16927 17292 . - . ID=g13770.t1.exon2;Parent=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 16927 17292 . - 0 ID=cds.g13770.t1;Parent=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 16585 16764 . - . ID=g13770.t1.exon3;Parent=g13770.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 16585 16764 . - 0 ID=cds.g13770.t1;Parent=g13770.t1 #PROT g13770.t1 g13770 MSHQGSSQCHPCSSGSYATTPPSNVCVLCAPGSFMPSSTSAGPCIPCSAGSYAAHPGSSVCSGCGKGRYLPSPNATSESECITCPPGGCCAGDVTPQPTPCPSNRYCPAGRTIPIRCSALHEGTGQGCVLSRDAIAVVACVAGVLVSIIAVVVYRNYMRRKAGDQQLQPLLDTAIINEPPVYGGL* # ORIGINAL: g13766.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 6363 6671 . + . ID=g13766;Name=g13766.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 6363 6671 . + . ID=g13766.t1;Parent=g13766;Name=g13766.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 6363 6671 . + . ID=g13766.t1.exon1;Parent=g13766.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 6363 6671 . + 0 ID=cds.g13766.t1;Parent=g13766.t1 #PROT g13766.t1 g13766 MGTEDLAAHPPLSGTGRPELFRARATPFLLNSVLLSGLGVRGAGGVRAPWSHSEGEDRRTGDARLASARPISGPPLGIDNRETPHPHVDSRETKEAHRVSGF* # ORIGINAL: g13765.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 3518 6574 . - . ID=g13765;Name=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 3518 6574 . - . ID=g13765.t1;Parent=g13765;Name=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 5797 6574 . - . ID=g13765.t1.exon1;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 5797 6574 . - 0 ID=cds.g13765.t1;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 5543 5680 . - . ID=g13765.t1.exon2;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 5543 5680 . - 2 ID=cds.g13765.t1;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 5305 5405 . - . ID=g13765.t1.exon3;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 5305 5405 . - 2 ID=cds.g13765.t1;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 5068 5173 . - . ID=g13765.t1.exon4;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 5068 5173 . - 0 ID=cds.g13765.t1;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 3518 4896 . - . ID=g13765.t1.exon5;Parent=g13765.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 3518 4896 . - 2 ID=cds.g13765.t1;Parent=g13765.t1 #PROT g13765.t1 g13765 MGRADARRASPVLRSSPSECDQGARTPPAPRTPSPDRRTEFSRNGVARARKSSGRPVPDSGGWAAKSSVPILGNSRARPQATGTNNANSLKGKQPRPPSYGARSIRAVLSAVTPALTAECPGCKERVPVSRMGFHIDESCHALWPNNTRSRAASKSGTDSTACEVPDMPYSELFAALRGTDTIPCAGECTAAKGQAGGCSGPRGTLEKPASASGTPSPRSRRPYYQRNFLAVVECAVDNHAALFDDGQAQLVTAFRALPEEAQRLYIRLYERTPTWFRLARLDYPDLGDLAAYVKSLASGGFAVDAISGGASLEDTLDLLTAPELSSACARFNVDHRGMKAQLVKRLANYGRTQLSVRGTSTESVVLAAVRSIVEPDDEDRSRAHRTLFAIGRASYPRYALTMDPPFLSAHAAASYEDALFREQQMIADVERGEHGLALSRATWASACLQAHLERPVMHPPCPCIIQRHGDEGGLLERFSAGWVACRMVCLSVELLDRATQHDAAIATLRVLLAQRRYLQDRRGRWWDRLALNLDRHVHDPESAMRTCIEGMSDMLVRTGHLLALHERAERLARRHPHLGVVMAAMVPRLALRTARVRVLVAHRLPSEQRAMYANKSGGVCDVEELALERYGADGWRGVHGEGSTATALFATFMWDALFAPCHGVFRTPFQVGPLDLSTDCFYTHRRAIIDGRLAAIRAMTVTDLCMEVERMWSLRARTSCVGMNWDLCDVDSLADIACGIGSRGVAGICDVLARDFRHSAGGMPDLCLWRRNPATGARETMFVEVKSENDRLSQKQRIWIDQLLWLGVPVELCRVLGPGIPGDAVNADIDEV* # ORIGINAL: g13768.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 . gene 8614 14040 . - . ID=g13768;Name=g13768.t1 NODE_222_length_30808_cov_47.8955 . mRNA 8614 14040 . - . ID=g13768.t1;Parent=g13768;Name=g13768.t1 NODE_222_length_30808_cov_47.8955 . five_prime_UTR 13923 14040 . - . ID=g13768.t1.utr5p1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 13768 14040 . - . ID=g13768.t1.exon1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 13768 13922 . - 0 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 13567 13667 . - . ID=g13768.t1.exon2;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 13567 13667 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 13278 13410 . - . ID=g13768.t1.exon3;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 13278 13410 . - 1 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 12164 13187 . - . ID=g13768.t1.exon4;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 12416 13187 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 11497 11711 . - . ID=g13768.t1.exon5;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 11040 11346 . - . ID=g13768.t1.exon6;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 11040 11341 . - 0 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 10836 10935 . - . ID=g13768.t1.exon7;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 10836 10935 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 10480 10610 . - . ID=g13768.t1.exon8;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 10480 10610 . - 0 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 10139 10381 . - . ID=g13768.t1.exon9;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 10139 10381 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 9857 9982 . - . ID=g13768.t1.exon10;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 9857 9982 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 9553 9744 . - . ID=g13768.t1.exon11;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 9553 9744 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 9358 9439 . - . ID=g13768.t1.exon12;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 9358 9439 . - 2 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 8957 9235 . - . ID=g13768.t1.exon13;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 8957 9235 . - 0 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . exon 8614 8811 . - . ID=g13768.t1.exon14;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . CDS 8749 8811 . - 0 ID=cds.g13768.t1;Parent=g13768.t1 NODE_222_length_30808_cov_47.8955 . three_prime_UTR 8614 8748 . - . ID=g13768.t1.utr3p1;Parent=g13768.t1 #PROT g13768.t1 g13768 MAPAARRAPAAPPTSLPAGFASFMDKFIVLSIALALVAMFIEIRFPTSPVSLILLNPPERHGRCVGLLPAGRLGSLCGYAGPSDIDAIPGRDLLLIANTRMSEHARPGIYAQSVNGEPALIFPAETDNNGYAAPTNGSPDCRDPPNAATFVPVALSAASTKNGVLVAVAAVSESRTGVEMFKLEGTGVRLRLRWVGCLRSPSGTFPSDVALYDNGTVVVILERGGAGWAGAVRRSVGMAASFVLGDKAWSTAAVMIWHSGTNGPAAERWMPLGGALNMGNPRSIAVTPAGSLVVGDASGRVCSISATQDSTSFDTVHCATIEASFPRRVVAFGHDTVLVVSLRRSVNNAFVAIRCALGRTPCDSPWTLDIVKTENGKGEDTCADWK*MDAGADAALGWRSQLTQIQLLQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQHHMQQVLLQQQQHLQYARDWAEACSICFENRCDFCLPNCQDQFCRSCIRTYFTEKIRDSWGLTSTKLTCPVCYDPLTIELVKRYIDEDTLALYRKYNDPYRPVTRHCGTCQYEQPIVSPARDSDLECLSKAFDRDIRSTIRDDAHLAAVRDEFDALQRGKGDPAILYAAFLSAAHSASTAPNQPTVPSRRKRSRRELEGFSDSGHPECPSQVCLAEFSALSRAMIRLVMSPEARLALQFLHVKSFPRHECEKCGSRMCFQCGEQAWHDDGETCEDHLRRRIGLIRVRTACHSDGKAPASDLQELQTLEWKLANGKRCPRCCIFIERDDGCNKMDCLYCGSQFCWQCLKAWNKDCGFYTCQSEPETVTLTPAQAAVAETAETAALEPKGGPSDYPGSPGWDAVPDVTARRDSDVSLRRDSDVSIDGVERSAKRAKAEAGVPDVTSSSFGKFRVRA* # ORIGINAL: g13772.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 19147 22334 . - . ID=g13772;Name=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 19147 22334 . - . ID=g13772.t1;Parent=g13772;Name=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 22018 22334 . - . ID=g13772.t1.exon1;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 22018 22334 . - 0 ID=cds.g13772.t1;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 21700 21922 . - . ID=g13772.t1.exon2;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 21700 21922 . - 1 ID=cds.g13772.t1;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 21480 21560 . - . ID=g13772.t1.exon3;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 21480 21560 . - 0 ID=cds.g13772.t1;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 20792 21338 . - . ID=g13772.t1.exon4;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 20792 21338 . - 0 ID=cds.g13772.t1;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 19147 20609 . - . ID=g13772.t1.exon5;Parent=g13772.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 19147 20609 . - 2 ID=cds.g13772.t1;Parent=g13772.t1 #PROT g13772.t1 g13772 MEAMAAVMAASAESPSARPLDGKEHTEHEEGARDNAPVPFIAPDTVSGPASVGGAVVQKEKRRSSRVEAFGRGAKRLVMSLIPLGFGRAPLSPALAGGSAKDIGDGAPVGLRRMVNSYTDLGGMSGVCGLSNLGNTCFMNAILQCISNTPGLADYLIANRHKTDINTDNPMGTKGEVVEQLSILLKAMWSGQHKSVAPRDFKAAIAKFAPQFGGYGQHDAQEFMSFLMDAVHEDLNRISKKPYREDPDGADGRTDEDVAAECWKNHRDRNDSVIVDAFQGQMRSVLVCGGCGNRSVRFDPYMYLSVPLPDYTVREMAVTVVPADASCEAVRAICHVHRQGTILDLRKALVAQRPAGIAESAEVVIAEVFLHRFHKFYSDSHKVESILDKDVIFAIEMPKESSPSSTTAGGDSVTVAVTHVLSAANPQAEQERFGVPSLVRVSRGCTHRELADTLAASLVRQFGTSPAVPSDSATGTSASSAPVPMAKDPTVVDEVHADMAMDITDAVGEMGDHVEGHVPGIPRRRRVTFGPMAVSPPLATSTAGDPSAAAAGVWDADWGRSSPTTAPAAARPRLPGGLVRIVDGQSTRVDWDRVDWQTRLRRPSAAGKYLRAPFTLGRASGVAIDPACDATPLADECAGSTVELVAWWDPGAPETGSLRAAIAASTAGDPADPRRRGSQAVLGLNDCLELFMHEERLSGEDCWRCPKCKETSPRTTKALALWTLPDLLVVHLKRFCYTARWATKLEQAVLFPTVGLDLSRHVTGPAAGQPAVYDLYAVCNHFGGIGGGHYTAHCRNRHTGAFYDFDDSHTTLLRQESFLSKNAYVLFYVRRGTRGLVTPGILRAGGLVQQPTFGFVIGDEDEGEGAAENQRTLEAT* # ORIGINAL: g13769.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 14271 15034 . + . ID=g13769;Name=g13769.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 14271 15034 . + . ID=g13769.t1;Parent=g13769;Name=g13769.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 14271 14492 . + . ID=g13769.t1.exon1;Parent=g13769.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 14271 14492 . + 0 ID=cds.g13769.t1;Parent=g13769.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 14849 15034 . + . ID=g13769.t1.exon2;Parent=g13769.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 14849 15034 . + 0 ID=cds.g13769.t1;Parent=g13769.t1 #PROT g13769.t1 g13769 MQSSLPTFAPVRILVGATGSVASIKIPALVSALFAIIENVEIRLVVTQRAEHFFSADALPALQSAILRDADEWQLRKWADLFLIAPLDANTLAKVSTGICDNLLVLAWFSFLHGVSRGYLLSFPPFSPIVTRMSS* # PASA_UPDATE: g13771.t1, single gene model update, valid-1, status:[pasa:asmbl_3834,status:3], valid-1 NODE_222_length_30808_cov_47.8955 . gene 18045 19050 . + . ID=g13771;Name=g13771.t1 NODE_222_length_30808_cov_47.8955 . mRNA 18045 19050 . + . ID=g13771.t1;Parent=g13771;Name=g13771.t1 NODE_222_length_30808_cov_47.8955 . five_prime_UTR 18045 18103 . + . ID=g13771.t1.utr5p1;Parent=g13771.t1 NODE_222_length_30808_cov_47.8955 . exon 18045 18380 . + . ID=g13771.t1.exon1;Parent=g13771.t1 NODE_222_length_30808_cov_47.8955 . CDS 18104 18380 . + 0 ID=cds.g13771.t1;Parent=g13771.t1 NODE_222_length_30808_cov_47.8955 . exon 18725 19050 . + . ID=g13771.t1.exon2;Parent=g13771.t1 NODE_222_length_30808_cov_47.8955 . CDS 18725 18951 . + 2 ID=cds.g13771.t1;Parent=g13771.t1 NODE_222_length_30808_cov_47.8955 . three_prime_UTR 18952 19050 . + . ID=g13771.t1.utr3p1;Parent=g13771.t1 #PROT g13771.t1 g13771 MGRAGGYSPTLSDWVFILYFATHIPITLCIDLQAILPHTLYPTDLVALVQWYGNTFHDRFMLFPPAWFQSFIVCELLFQLPFFFVAIHGFYKGLNRIRVPCIIYGAHVSTTVIPILTEFVFADIPRSDKYFLLSVYSPYLLVPLALTFKMAFQEHPFGPNIAHRKAL* # ORIGINAL: g13773.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 23827 24777 . + . ID=g13773;Name=g13773.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 23827 24777 . + . ID=g13773.t1;Parent=g13773;Name=g13773.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 23827 24777 . + . ID=g13773.t1.exon1;Parent=g13773.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 23827 24777 . + 0 ID=cds.g13773.t1;Parent=g13773.t1 #PROT g13773.t1 g13773 MQHIVGHFEKLGEWQVSLDEFETNTPLGPKTFANVVATLNPGASRRLVLAAHYDSKYFPNGGFVGATDSAVPCAMMLYVAQHFDAELKGHARRTRQDPHATTLQLIFFDGEEAFVDWTDTDSIYGSRHLAEKMSKSLVPGVNVTELAAIEALVLLDLIGAGGGHYYSGYASTNAFHDHLFSVGELLLRVQMARLGSRGEVFCSGAHRPANCEYSPNHAMPTSAGTPTERRLRGTGRLQNGNRAYFRPSASGIAGGEVADDHLPFLRRGVPVVHVIQRPFPPTWHTLADNERGLERDHVVDMAAIVSLFVAEHLGLR* # ORIGINAL: g13764.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 174 2861 . - . ID=g13764;Name=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 174 2861 . - . ID=g13764.t1;Parent=g13764;Name=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 2556 2861 . - . ID=g13764.t1.exon1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 2556 2861 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 2213 2296 . - . ID=g13764.t1.exon2;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 2213 2296 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 1731 2041 . - . ID=g13764.t1.exon3;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 1731 2041 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 1159 1405 . - . ID=g13764.t1.exon4;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 1159 1405 . - 1 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 860 958 . - . ID=g13764.t1.exon5;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 860 958 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 472 663 . - . ID=g13764.t1.exon6;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 472 663 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 174 314 . - . ID=g13764.t1.exon7;Parent=g13764.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 174 314 . - 0 ID=cds.g13764.t1;Parent=g13764.t1 #PROT g13764.t1 g13764 MTDPLAAATENVLLLSRVAAQTPHAHGSAVAAAHAPRADVGSRVPVLNGGGATTATALAGVRSHGSSHGSDVAERHARDALDAALVFGVEDAVRPFGAMVAAGACEDAAKHLLGVLYSGRSCARAVPQMEVARDFYKQAGGDANAEERRAWRAEVVCVLGPHVDMMARVMQFQTDATATLVALVEAGLPSQIALPSPPPVHLEAVGRLLGALAALDCAKNARSSWTNDYAIYRRAMAGAADINNTDLSALEKQQKLQQFLATQSAILSALQSRFLSIPGSGWRDVLGDAVDHCADLIDGSACGPILLPRERSNLRLAVGYGLAILDHLAGDAAKRDRRTQSESVNKVFSMPVVPVIGDVYCNIAALSGQSRAAAAAAVHTAPTPSEVREELKRVSTCLADTVARLLIHHSSLERGGAVAKTRPAESPEAGTSGDEPDDLFACFRNGLESLSLGTWTLSAQ # ORIGINAL: g13767.t1 original gene structure, not modified by PASA NODE_222_length_30808_cov_47.8955 AUGUSTUS gene 7084 8398 . + . ID=g13767;Name=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS mRNA 7084 8398 . + . ID=g13767.t1;Parent=g13767;Name=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 7084 7236 . + . ID=g13767.t1.exon1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 7084 7236 . + 0 ID=cds.g13767.t1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 7426 7494 . + . ID=g13767.t1.exon2;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 7426 7494 . + 0 ID=cds.g13767.t1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 7616 7696 . + . ID=g13767.t1.exon3;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 7616 7696 . + 0 ID=cds.g13767.t1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 7847 7909 . + . ID=g13767.t1.exon4;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 7847 7909 . + 0 ID=cds.g13767.t1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 8021 8111 . + . ID=g13767.t1.exon5;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 8021 8111 . + 0 ID=cds.g13767.t1;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS exon 8256 8398 . + . ID=g13767.t1.exon6;Parent=g13767.t1 NODE_222_length_30808_cov_47.8955 AUGUSTUS CDS 8256 8398 . + 2 ID=cds.g13767.t1;Parent=g13767.t1 #PROT g13767.t1 g13767 MLETGDARAGCTLADGSLWVFGYGSLTWKVGFPYEARCPGFIRHYARRFWQGSTDHRGVPEAPGRVVTLVEMAEESTWGIAYRIHPSHVDEALAYLDFRERGGYTSDSALFHPKDAGVAPFKVLVYSATPHNPNYLGPCPLDEIARQIAVSVGPSGHNAEYLIQLADAMRGIAPEHGDDHLFELEAMVKAIMEAVQPTQ* # PASA_UPDATE: g13774.t1, single gene model update, valid-1, status:[pasa:asmbl_3836,status:12], valid-1 NODE_222_length_30808_cov_47.8955 . gene 25134 30719 . + . ID=g13774;Name=g13774.t1 NODE_222_length_30808_cov_47.8955 . mRNA 25134 30719 . + . ID=g13774.t1;Parent=g13774;Name=g13774.t1 NODE_222_length_30808_cov_47.8955 . five_prime_UTR 25134 25645 . + . ID=g13774.t1.utr5p1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 25134 26476 . + . ID=g13774.t1.exon1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 25646 26476 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 26716 26871 . + . ID=g13774.t1.exon2;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 26716 26871 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 27090 27683 . + . ID=g13774.t1.exon3;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 27090 27683 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 27902 28015 . + . ID=g13774.t1.exon4;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 27902 28015 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 28260 28495 . + . ID=g13774.t1.exon5;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 28260 28495 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 28764 28776 . + . ID=g13774.t1.exon6;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 28764 28776 . + 1 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 28891 29010 . + . ID=g13774.t1.exon7;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 28891 29010 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 29186 29417 . + . ID=g13774.t1.exon8;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 29186 29417 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 29607 29844 . + . ID=g13774.t1.exon9;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 29607 29844 . + 2 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 29999 30173 . + . ID=g13774.t1.exon10;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 29999 30173 . + 1 ID=cds.g13774.t1;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . exon 30432 30719 . + . ID=g13774.t1.exon11;Parent=g13774.t1 NODE_222_length_30808_cov_47.8955 . CDS 30432 30719 . + 0 ID=cds.g13774.t1;Parent=g13774.t1 #PROT g13774.t1 g13774 MSDSAPRQSSPLNEAARNTREPRTPLHLSPRNSPRNSVTGDTLGSPSTPTGQLQPGQQSQTPGARTPRAFVSPLALSALRTLATAPHSHGRRESWAGCTSPMSPGRFSFGGTPSPSTANAPLTPQPGTPFSPRSSLSAGNASTFSTSSVTETSAADASHSSALADGEQSASGEDSDGRESWMDSGDSSLATSTSGSPLTSDNDDEGGAGRAGKQQGDGGDVQPDNVRPAGDGAASRKGDGSPATDGGGKADADLAERKRRSKQMRRLGKSMPSLVAKPNPKLAQLRAPQQLPKPNTDLRCYSPVNSPIFGQLDRPGSPFTASANESPLESPRRMSFMGTRPQLARPRAEHAEGGAPSFLSPFSAIGRRSRAASVGLDGSAPATAMSSPRRSIDSTAGAALAGQSPVMSPIAAPGGVMALPRAVEGSGGQRGRSDSGGAAVSSPSMDAPPASFANPPMSVGVLGVPGLSSSGHSLKIELDAGRSRRSSSGASSLEASMNFGGEVQGIQHQLPAQPSTVDLRELEEYFGGEEEVGNGYTFAARTRSLSPVRRDRGDSGVDKSYFAERFPKVRQQFEQQLRAFLKSCRRDSGVGDANSGIVGGVGGTSSGYTSAKEEDMSALGIVMDIEDIVRHLLLASAANRLTGRYFREVVARVEGMLGTYPRLRSRWSRRIRKLLFIVARPARLMECLEFDPNEYLSSVSSSAAAADDIDPLTAPQREWVADLSLSSAHIPAYIRSKLSNKRARPSRSSQSQEITKASVAEESPSGLRRTASDATRSGTMLIRRQKSLQRLQSVMRQDSFDSVSGDYLAGTSTPPTGVRAAWAAGKKPGKEDFEIIKLVSRGAYGSVHLARHKDGDDVFAMKILKKKDMILRNQVEQVMAERHILAFARNPFVVSMHCSFQTTDHLYMVMEFVNGGDCATLLKNLGVFSEEMARNYTAETVLALEYIHSYGIVHRDLKPDNLLVTADGHIKLTDFGLSRIGLMNSGLPLCRPMRTHVL* # PASA_UPDATE: g3022.t1, single gene model update, valid-1, status:[pasa:asmbl_7328,status:12],[pasa:asmbl_7329,status:12], valid-1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . gene 130 1612 . - . ID=g3022;Name=g3022.t1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . mRNA 130 1612 . - . ID=g3022.t1;Parent=g3022;Name=g3022.t1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . five_prime_UTR 1611 1612 . - . ID=g3022.t1.utr5p1;Parent=g3022.t1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . exon 1304 1612 . - . ID=g3022.t1.exon1;Parent=g3022.t1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . CDS 1304 1610 . - 0 ID=cds.g3022.t1;Parent=g3022.t1;5_prime_partial=true NODE_4443_length_1612_cov_20.4619_potentialcontaminant . exon 130 857 . - . ID=g3022.t1.exon2;Parent=g3022.t1 NODE_4443_length_1612_cov_20.4619_potentialcontaminant . CDS 130 857 . - 2 ID=cds.g3022.t1;Parent=g3022.t1;3_prime_partial=true #PROT g3022.t1 g3022 HRDLKLENILLSSDRNVLVSDFGLGRTFTDDLCGTFCGTPLYAAPELVSGIKYPGPPADAWAMGVVLYAMVVGNPPFQAEALKQLYEKIRGVQFVFPDYLSEGLKDLISKILVKDITQRYTVGQMREHPWVNEGYDGPPPRYPSAVPKDASDSQTDRVKSIGYQDNAKIYQFNEVGTPHTPMTVEERQKLGLPTVALLSSEQQQHVTSSASMGESGEGFALSQVSSGDITLSVPQTPLSGERNTDHHDTSSAGMRSSGTIDKSVEEEDIGECLDDVTPLKSDMTADARRVSSVDDRGVGYRGGVQNPGAPPGGVAGPHRRHTMVAVTEEDRAKIQSVVDKAASAS # ORIGINAL: g12909.t1 original gene structure, not modified by PASA NODE_1206_length_13060_cov_45.6977 AUGUSTUS gene 5385 6360 . - . ID=g12909;Name=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS mRNA 5385 6360 . - . ID=g12909.t1;Parent=g12909;Name=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 6202 6360 . - . ID=g12909.t1.exon1;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 6202 6360 . - 0 ID=cds.g12909.t1;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 6042 6115 . - . ID=g12909.t1.exon2;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 6042 6115 . - 0 ID=cds.g12909.t1;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 5824 5885 . - . ID=g12909.t1.exon3;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 5824 5885 . - 1 ID=cds.g12909.t1;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 5547 5703 . - . ID=g12909.t1.exon4;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 5547 5703 . - 2 ID=cds.g12909.t1;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 5385 5421 . - . ID=g12909.t1.exon5;Parent=g12909.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 5385 5421 . - 1 ID=cds.g12909.t1;Parent=g12909.t1 #PROT g12909.t1 g12909 MTLSDSLLSPAEMPLGPTAMLSSAAELCSIARASVGRNARGDALAGTNTGGSRNPLTDVARNEVAGRAVTGAALTPTKLINSQKRALDHDPSTDKENAAPPQAQARLGDSVKMPSDLDCVDEEGAGKSAGLALKRRGRTMHSSYKEPPLNRKLRKGDSNTFI* # PASA_UPDATE: g12910.t1, single gene model update, valid-1, status:[pasa:asmbl_798,status:12], valid-1 NODE_1206_length_13060_cov_45.6977 . gene 7820 12806 . - . ID=g12910;Name=g12910.t1 NODE_1206_length_13060_cov_45.6977 . mRNA 7820 12806 . - . ID=g12910.t1;Parent=g12910;Name=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 12684 12806 . - . ID=g12910.t1.exon1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 12684 12806 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 12340 12531 . - . ID=g12910.t1.exon2;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 12340 12531 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 11161 12186 . - . ID=g12910.t1.exon3;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 11161 12186 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 10212 10907 . - . ID=g12910.t1.exon4;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 10212 10907 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 8723 10009 . - . ID=g12910.t1.exon5;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 8723 10009 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 8470 8604 . - . ID=g12910.t1.exon6;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 8470 8604 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 8209 8369 . - . ID=g12910.t1.exon7;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 8209 8369 . - 0 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . exon 7820 8104 . - . ID=g12910.t1.exon8;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . CDS 7996 8104 . - 1 ID=cds.g12910.t1;Parent=g12910.t1 NODE_1206_length_13060_cov_45.6977 . three_prime_UTR 7820 7995 . - . ID=g12910.t1.utr3p1;Parent=g12910.t1 #PROT g12910.t1 g12910 MEVDVPVASAEDGTRRLKIIKMEFENFKSYRGVQTIGPFHKRFSAVVGPNGSGKSNVIDGMLFVFGERAQNLRQKKVSELIHNSDQAKNLESCRVTIHFQEVLDKDGDDFEPIPGTELFVSRVATRKNTSSYYINGRVSSHGEVTTMLKARGIDLDYNRFLILQGEVEQISMMPPKARTEHEVGLLEYIEEIVGTKVYRQPIEEAGKQVEALNEERAEKLNRVKAVEKEKDSLEGAKAEAEEHIRRENELAEKKGMLYQANKAECARTGDQLRTRKGECEQRLTTERDRMKGTTDRLAVLEKEVKRKSAELDKIAAAVEEAKSDFAAFERKDIKYREDIKHAKTKLKKLEKSREKESHSAAEQQSMADNFAADVAKFTKEADALKADVDREQTALEIMYEGLKGQTAGVQALLETKQRELMPHNERRAEIRGKMQLAVAEKDMLAKKLADLAAKQEDAKASAAKAVADSQQLRVEAKEIASSVAKLEGELSTINKRIANLSAEESDVQKRLNAARAKCEDGRRVVQMAKSRGTIVEALLKERDAGRIAGVRGRLGDLGSIDAKYDVAVSTAAGGSLDGIVVDTAVEAQKCVSFLREKGLGRATFVILEHIAQLAEKARQYKGTEEAPRLYDLVKPRDAKYACAFYHALRDTLVSTNMDQATKLAYGGERRRRVVTLEGQLIDISGTMSGGGGKPARGLMALSSGQSNGHASANADVTPAELGHFEAEVEKETASLKNLRDECDVLVRRQAVVEPELSKLRMRSKKVELELSALAAREKDSQSNGDDASSASESAKKDEARIRELEKTVAGLERTLEDAEKAASRVQKEIDVLQEQIMEIGGMPLRLLRSKVQTMSERLETARQGVTRSNVSVKTAQKAADKAKDKTAALEKEVTDLISQLEKMTVEFKELENSAMGVMESYKKAQELHGAKDEELAEARKEHDELKKDVNRMRTAEVDVSNQLEDIARALKENDAKEKHWFKQFESLRLQPLSGEVINGEGIGSEKDDAALRPKTLTEEEMAAVDREEIKYAIAVLEERLGQARPNMGSIREFYRKEEEYLSRAKELDSITERRDAVRSEHDTLRKKRLEEFMDGFSKITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHFKPSPLYVMDEIDAALDFKNVSIVANYIKERTKDAQFIIISLRNNMFELADRLVGIYKTDNATKSVTINPAMIAAN* # ORIGINAL: g12907.t1 original gene structure, not modified by PASA NODE_1206_length_13060_cov_45.6977 AUGUSTUS gene 248 418 . + . ID=g12907;Name=g12907.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS mRNA 248 418 . + . ID=g12907.t1;Parent=g12907;Name=g12907.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 248 418 . + . ID=g12907.t1.exon1;Parent=g12907.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 248 418 . + 0 ID=cds.g12907.t1;Parent=g12907.t1 #PROT g12907.t1 g12907 TAVIGEDDPEEWEEEAASLFEWSQDLTYDAYYQEWGTVGLHSPQGLQPSPHGGVPY* # ORIGINAL: g12908.t1 original gene structure, not modified by PASA NODE_1206_length_13060_cov_45.6977 AUGUSTUS gene 1099 5146 . + . ID=g12908;Name=g12908.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS mRNA 1099 5146 . + . ID=g12908.t1;Parent=g12908;Name=g12908.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 1099 1761 . + . ID=g12908.t1.exon1;Parent=g12908.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 1099 1761 . + 0 ID=cds.g12908.t1;Parent=g12908.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS exon 1994 5146 . + . ID=g12908.t1.exon2;Parent=g12908.t1 NODE_1206_length_13060_cov_45.6977 AUGUSTUS CDS 1994 5146 . + 0 ID=cds.g12908.t1;Parent=g12908.t1 #PROT g12908.t1 g12908 MSTRIRGVDLPVFADECIFTVSPAPTCVSCDAAGRVLVATEDGRVRVFTSGDASPVLARDDRRIAERAGVWREAFTFQLRGASAQHIGHCQRGDFIVTRESVVRNDAEAHAADAALHPDSNHEGSSNVAGRDCVARVYRGWSQGSTADPAGSEHTDYGTHHRGSAPAHLSQSRAAVPETHPTCELIDGKMNVGHVASCSVTSRVALGGSGLVRVFEVLSCETELASTVDHTPRAPLKTSIIHLYTLILEAPILTSLAICGDYTAFVSSELILRVMCVSTSDAASQSNASALQRDSGASTGAHSSPVLPKQRSLTQWMRVPVPYARPSDSAVVEETSAEISFAADGVVVSSNMSQSALGTDTPAAGQRRTGSTEVCMPNFLRLGRSASACEAVAGERMVVTDAHCELFGEYNPSDPPMHVALSATAPLQRVYPGCADAAGLSDASAAPRPLGMAVRCFVSTTLGARAYVVNTPDVRELSSYAFAGEAVAVDADSDLVYVVSSFGLLQSFTSRTGGVDDECAPSPPPKVCLANMHACGPAVLAMAAGTDVVVLLEERRDGDVGETQKPSLQLRALRRTPAADLCSVAVSRSRDFETQAPQAYIESIFEGHVIMCAAVRTAEKVRSALASCNAEGSQLQRRYSRILAAGATASASLPKSFERLAEHHLGRRNLEKAALCLARTSLPLSECIARISPSFGSDRPTSSLPGEDAACRRALLSLVFAVLSPEIRPPMLALATPGACGLQFPLPGRVDASPRLAAAIMGLLASDLHDSLARVILDCPHLRYDAAVASSLLQAASESDSCGFACRGTAMGVGLVGADASLSTARCPLASLAQVTIHAHSGRLDVARQHLVGIPRDALVACLTWRPHVIVPVATAEESLQKSAQRLEVPTLGVLLRVTPSTRHAIVDALAACRIRPIVPAVAIVLLKREDIASACDLSFAGTTPVGGAVGRVRSSFLADSIFDEDAELLFRAYLEHVCESKLVPGSAASSSTGAWDADTEACVLLEMYSAALARIRQREKSAILHRKEESSLSKIRFAWMDASPFSGLVDGQEVMRRTLGLICGCARLGRTRVSLYAQSLFGGESVDDAIVQIACLPSVGRLGDAVGVIVLHEWECGLLAYLETSCEALGRPLYHRIGWPSNPPTTVAKSDGETQAPVSLALPRDWTAGICTLAGSTGEGEAYSLWACALQRIRDDMAADMKPSRVAALAREYVRVLEYVSVRMLPGDFIASLPPNASLSFHLPFVERCIRSVSAALVRVRLGRIALSSS* # PASA_UPDATE: g10023.t1, single gene model update, valid-1, status:[pasa:asmbl_8392,status:12], valid-1 NODE_597_length_20436_cov_41.8708 . gene 12918 20235 . + . ID=g10023;Name=g10023.t1 NODE_597_length_20436_cov_41.8708 . mRNA 12918 20235 . + . ID=g10023.t1;Parent=g10023;Name=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 12918 14652 . + . ID=g10023.t1.exon1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 12918 14652 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 14990 15360 . + . ID=g10023.t1.exon2;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 14990 15360 . + 2 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 15615 15711 . + . ID=g10023.t1.exon3;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 15615 15711 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 15986 16132 . + . ID=g10023.t1.exon4;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 15986 16132 . + 2 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 16377 16914 . + . ID=g10023.t1.exon5;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 16377 16914 . + 2 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 17264 17390 . + . ID=g10023.t1.exon6;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 17264 17390 . + 1 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 17542 17718 . + . ID=g10023.t1.exon7;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 17542 17718 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 17948 18144 . + . ID=g10023.t1.exon8;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 17948 18144 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 18525 18610 . + . ID=g10023.t1.exon9;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 18525 18610 . + 1 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 18874 19019 . + . ID=g10023.t1.exon10;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 18874 19019 . + 2 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 19410 19559 . + . ID=g10023.t1.exon11;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 19410 19559 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 19880 20070 . + . ID=g10023.t1.exon12;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 19880 20070 . + 0 ID=cds.g10023.t1;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . exon 20226 20235 . + . ID=g10023.t1.exon13;Parent=g10023.t1 NODE_597_length_20436_cov_41.8708 . CDS 20226 20235 . + 1 ID=cds.g10023.t1;Parent=g10023.t1 #PROT g10023.t1 g10023 MDNTGIGHGRKHHHAHSHSHLSHHSHHSHHSHHSHHAHTGDHNHGERRTSDTDATALADGGDWSLNGSMNNSSDGGFNVGGEKSFLAVENGWRSRTASVNSREGRDGGGDAGGSLDIVDIAGRMMRAIDVRDRRWLLRTYRQAFVGREAVTWMLTEGYAQSEHEAVLIGNMLLNRDIIEHVNRDHPFANERLYYRFMPSFVRRFEPDSPATPHVDGDVQSVCSGGASTGSGGSGTGVDNEAYLLELLCRMRLGVDVRDRKWMLRTYRDVFVGKEAVKWMIAEGIVEDEAEALALGNLLLARGYFEHVTQGHDRFKNEYLFYRFLTPHVGTSADADASLGPAEARFAGMPGTHVEDVAQVHEVCARMQRNVEVRDRKSMMRVYKACFEGRDAVSWMIAEGVADTDRDAVLLGNVMVSQKFIRHVSGDRPFKNDRSFYVFVDDHEHDHADHQHHQRGLHSNNSDELSSRNSGSHSPLTLRRQPHVDGGVEEGGADFVLVGGEDTPKLFGFALARAATPSSVRQLIDAGAAMAQRMGVRDHIYLLQTIQKSFTGSEAVRWLISEGYAANVREALAVGDALIAQGVVQNIGHESHHMKDGDQFFYRFPAATTSSDIPPLGLAGVKNTSQLQLHAPFSIDTWIDKQLLEVDVFTGDAAVTERLFMAAIDRRRGVVPQTVHRNDADAEEPAAVDSASGTRSGEASARVTPTTSRKRISIAESVSTDGERLTEELAHSLSPEACVELLQRGFTVTVYKDGRQPKRRSAVVDTSLEIVVCRNPKTLGVKEIVLINSIREIRLGGMHCPSMLSKMREKMRAQQRRRLSNQVSTAVDVPFDMTAVTSVATANNATSSSTSATIAEESAGGDPQGGGGGGGAEEEHASESAPLCSRSNLLPQRSGAAQLATVGIGAMGTIGMSDLIPRSFALLYGNWEFLSVTCSSSAELTVWSKGMVWLSERGRAREHCDAAIWLRKEWILANQASVDTPIAYRKGVALFEKLSGRKGGFLCPVVEGPMTFKHFVRIFATSFQSNEVKTVFETYASGRRGGEGNSGIVVMTASDFTAFSRNMQKDHCASMEWSRAIIGRETGGGWDMDARAFSEYVMSEENGIFNLGDLELHQDMTRPLTDYFIASSHNTYLLGDQLRGTSSVEGYVRALLQGCRCVELDCWDGPDGEPIIYHGHTLTTRIMFVDVIRVIREYAFVASPYPLILSFENHCGVVQQVVMAVYLRQLLGDQLLTEPLDGFTENSPLPSPRDLMHKILIKTKVPSGRKAPPVDHATLPDSELCVGRLIVRKLSSKEKDKEKEKEKEKDKEKPRSTRLEVGLEFNKS* # PASA_UPDATE: g10019.t1, single gene model update, valid-1, status:[pasa:asmbl_8390,status:12], valid-1 NODE_597_length_20436_cov_41.8708 . gene 1031 2096 . - . ID=g10019;Name=g10019.t1 NODE_597_length_20436_cov_41.8708 . mRNA 1031 2096 . - . ID=g10019.t1;Parent=g10019;Name=g10019.t1 NODE_597_length_20436_cov_41.8708 . five_prime_UTR 1978 2096 . - . ID=g10019.t1.utr5p1;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . exon 1792 2096 . - . ID=g10019.t1.exon1;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . CDS 1792 1977 . - 0 ID=cds.g10019.t1;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . exon 1323 1654 . - . ID=g10019.t1.exon2;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . CDS 1323 1654 . - 0 ID=cds.g10019.t1;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . exon 1031 1129 . - . ID=g10019.t1.exon3;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . CDS 1111 1129 . - 1 ID=cds.g10019.t1;Parent=g10019.t1 NODE_597_length_20436_cov_41.8708 . three_prime_UTR 1031 1110 . - . ID=g10019.t1.utr3p1;Parent=g10019.t1 #PROT g10019.t1 g10019 MFVSVKYADNRTLLFNPNCLSIILLRCIKERCGYPSDVTVDLADEQGWVKNLSSHLDEYADKYLAPRASYVLVKMEKGEDGELMYTPLLDGSSKFLARLPGHAANSSKRTTSRLNLMGETDNVGSSTKSSDLGKINRRKSTTTVTPQKTGGSPNRQNSGSKHRKDAAKSSKKGAGDAA* # ORIGINAL: g10021.t1 original gene structure, not modified by PASA NODE_597_length_20436_cov_41.8708 AUGUSTUS gene 7291 8614 . - . ID=g10021;Name=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS mRNA 7291 8614 . - . ID=g10021.t1;Parent=g10021;Name=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS exon 8588 8614 . - . ID=g10021.t1.exon1;Parent=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS CDS 8588 8614 . - 0 ID=cds.g10021.t1;Parent=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS exon 7740 8404 . - . ID=g10021.t1.exon2;Parent=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS CDS 7740 8404 . - 0 ID=cds.g10021.t1;Parent=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS exon 7291 7441 . - . ID=g10021.t1.exon3;Parent=g10021.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS CDS 7291 7441 . - 1 ID=cds.g10021.t1;Parent=g10021.t1 #PROT g10021.t1 g10021 MEGAPAVEPTPLPPGWQEAVDATTQATYYWNTATNAVQWDRPTLVAQAASATDASAQSNPDDASLGHAGHTEAASHTTASAHANDGTHYGNNGAYSAGQLYVAPVSDTCWKCGRKDPLPEGVCLRCHNPAAFKAQQRMEQHHKQMMGSMGGRAAGDGPQRGGGGGAYRGAGGAYRGGGGGDRGGHHAQRQAPKPYDRPPNAGGSGRPPPRKTGNDDGIDPMDPASYADVPRGNWSAGLKEDDDPVTGVDSSATGPLFQSRPLPSPGDILRAKQAGAKKKG* # PASA_UPDATE: g10020.t1, single gene model update, valid-1, status:[pasa:asmbl_8391,status:12], valid-1 NODE_597_length_20436_cov_41.8708 . gene 2455 6934 . + . ID=g10020;Name=g10020.t1 NODE_597_length_20436_cov_41.8708 . mRNA 2455 6934 . + . ID=g10020.t1;Parent=g10020;Name=g10020.t1 NODE_597_length_20436_cov_41.8708 . five_prime_UTR 2455 2736 . + . ID=g10020.t1.utr5p1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . exon 2455 2822 . + . ID=g10020.t1.exon1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . CDS 2737 2822 . + 0 ID=cds.g10020.t1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . exon 3055 3114 . + . ID=g10020.t1.exon2;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . CDS 3055 3114 . + 1 ID=cds.g10020.t1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . exon 3249 3359 . + . ID=g10020.t1.exon3;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . CDS 3249 3359 . + 1 ID=cds.g10020.t1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . exon 3468 6475 . + . ID=g10020.t1.exon4;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . CDS 3468 6475 . + 1 ID=cds.g10020.t1;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . exon 6678 6934 . + . ID=g10020.t1.exon5;Parent=g10020.t1 NODE_597_length_20436_cov_41.8708 . CDS 6678 6934 . + 2 ID=cds.g10020.t1;Parent=g10020.t1 #PROT g10020.t1 g10020 MDTKQRRRRPHTAGKGRESVVVGLAKELRHHLETRRKEEGFDLRIRSEKPPRPESYNSLEDRYLQDYFSNPPIRKQLVRQGFINRRGEIIDAAEFEQRTFIKERIDKARKTLAGFVVDEIIELERRGVYGSASRPASARPPSAAGSMSSSSHMPSVRGARPRSPKIIPSRAQSRSPTGHHSQFGGPTPPRAPRPPSAVRPPRPVSARPISPQEAARLTWTAAQILALSEIGARHQSVGSLRKVQAGGHTSTSPTSRAGSARPAPPSGPRPTSARPGRKVRPVSAPSVRTNGNMRPASYKDFDSTDDEEQLLVDEDVVRVPHPPKNARVPRPPGAATGARKGAAKKSKGKGKGKGKGAASAQTTDTDISPERLAPFPKGSRRRSAEGSPSSDGNGDSGDRGRSRDVRRGTNSTPSASGSDRDLSSSPERRSSAGEDENAGDGGPTHQRQEQSMDDFALEDLPDNLPSPSAEAAQASGKAAKEKASPARSNDHSPARSQSRSRSPSRSRSRSPSRSRSRSHSRSPSRSSSASKSSRSRSPSRSARSASPSPARSVSPRRSPSRSRSRSRTPPRSRSRSRTPPRSRSRSRSRSRSQSRSSSRDRRSVSSEKAHDDEQVEDNAGDEGREEDAQPAEEEEQHEAQEEVDGQSYEQHDDDGRNEHEENGDGNEHAHSAVNHGGEEDMQNEFAAFGQIEMDEQVGDGGRDNDSDGEGADDGREGPVGGDEAGARSNAHTTDEFFDQRGDGGDGGEAHTTGGDDEDAQGEENDSAPNGNEGGDNRQEDEAHAHNDADDVDEDGQRGGGDLEDESGEIEHEPALSEDGRSAGDWNEEAQQQDAGADDDNEPQEEEEAQEAQEAQEEENDHEEHGHSHDDEAPLDDKADQHDEDHHDQDQQATEAQEDDAQHDDQQEAEESARGSKHSLVEAVHNAVTLLDDGRGIHDLALEADLNSLETLRLMNPGVVAEVDDQGRTALHVAARAGHVDVVEWLIAAGASLLAETQTGYLPIHFAASSGHTGVLGALHGAGADVNAAALDGITPLHLAAANGHVDCVKGLVGWGAHRDAVSTDAGGEPRTAADMARERGHDDCVDALGHEYPRDYIADIEPRKALGPPVPPIDVRSRPGSVAGDETLEVTDDGNTDTSDRESDPEGSRRRLGRRKTLLDMIQDEIDGQSPHR* # PASA_UPDATE: g10018.t1, single gene model update, valid-1, status:[pasa:asmbl_8389,status:12], valid-1 NODE_597_length_20436_cov_41.8708 . gene 286 766 . + . ID=g10018;Name=g10018.t1 NODE_597_length_20436_cov_41.8708 . mRNA 286 766 . + . ID=g10018.t1;Parent=g10018;Name=g10018.t1 NODE_597_length_20436_cov_41.8708 . exon 286 766 . + . ID=g10018.t1.exon1;Parent=g10018.t1 NODE_597_length_20436_cov_41.8708 . CDS 286 753 . + 0 ID=cds.g10018.t1;Parent=g10018.t1;5_prime_partial=true NODE_597_length_20436_cov_41.8708 . three_prime_UTR 754 766 . + . ID=g10018.t1.utr3p1;Parent=g10018.t1 #PROT g10018.t1 g10018 TLNPDVSLHAVGQGAMAVECRQGDTAILRLLSPIHDTPTAVCCVAERAFMRSLEGGCSVPLGVHTTIREVASRATHPLPRTHDVAAAENGRFELELVGGVFALDGSEVVRLSLRGVVADEADAETIGAQLADELRALGATRVLAEARKAHALSPQ* # ORIGINAL: g10022.t1 original gene structure, not modified by PASA NODE_597_length_20436_cov_41.8708 AUGUSTUS gene 9019 11640 . + . ID=g10022;Name=g10022.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS mRNA 9019 11640 . + . ID=g10022.t1;Parent=g10022;Name=g10022.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS exon 9019 11640 . + . ID=g10022.t1.exon1;Parent=g10022.t1 NODE_597_length_20436_cov_41.8708 AUGUSTUS CDS 9019 11640 . + 0 ID=cds.g10022.t1;Parent=g10022.t1 #PROT g10022.t1 g10022 MADEEDDGIQLNLRAPSVPIPRLPKPTSVKKAKDARQPPAINGVTQRKSPVKQQQQQQQQQQQQQQPPQKQQQQQHANKARSPGGASQHTQPHSERSDNEKGARIRQPQRDPDAHNNNDSKQAPTQHHPPAPKSSSLFSFNPEIPTVEVAAPTAAAIEKRKRAKRATPLSVTSFSELELEDALSAHIETGMKLTTMTRVQRLAIPHILSGVDVMVRSETGTGKTLTYLVPIAQALVSREEKVARADGPYAIILAPTRELATQILEVAQSLLRPFHWIVPGAVMGGEKKKSEKARLRRGINVLVATPGRLLDHLENTECLDVSRLQWLVLDEADRLTDLGFDKEVSAIISLLDKSAAKAASRGANVQTRQNLLLSATLRESVRRLAGVTLRDPLVVDAGTDEVVPLKDMHKKGGAADKGAGKNADGQKHGEDGADQQQHEQQKQQQSKTPQKDATAKVDSSKAANGANETGDDAGGMYATPAHLEQHYAIVPAKLRLVCLVTFLRRQLRSGGHKIVVFLSTCEAVDFHHTMLSHKGTVPEGGDEPECLLGSDGACFKLHGSLQQRERQDAWRGFCSASNAVLLCTDVAARGLDFPAVDWIVQYTVPADAADYVHRVGRTARLGRKGNALLFLMPSESAYVSVLASHGLTASPMDYADLLEPSGSSGRIHSRKRTPKAGGDGGEDEHAQGKKEFKLSHDAEAAATAIQLEAERLILSDKTMTTLARKAFQSFVRGYATYPTPMKSVGFIVSALHLGHAAKSFALREAPRELQRKSQSNNAKGRVSKATAKAQLVDRQKERRQETRHAMRHSGEDGNLSYRRGGSGGGSGGAGSGSGGGGGGGQTNRKRKMADEFGNDLVDGPLTKKRKTGGKGKK* # PASA_UPDATE: g6430.t1, single gene model update, valid-1, status:[pasa:asmbl_6904,status:12], valid-1 NODE_4050_length_2281_cov_24.918 . gene 89 2181 . - . ID=g6430;Name=g6430.t1 NODE_4050_length_2281_cov_24.918 . mRNA 89 2181 . - . ID=g6430.t1;Parent=g6430;Name=g6430.t1 NODE_4050_length_2281_cov_24.918 . exon 2032 2181 . - . ID=g6430.t1.exon1;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . CDS 2032 2181 . - 0 ID=cds.g6430.t1;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . exon 1563 1730 . - . ID=g6430.t1.exon2;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . CDS 1563 1730 . - 0 ID=cds.g6430.t1;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . exon 1036 1206 . - . ID=g6430.t1.exon3;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . CDS 1036 1206 . - 0 ID=cds.g6430.t1;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . exon 611 823 . - . ID=g6430.t1.exon4;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . CDS 611 823 . - 0 ID=cds.g6430.t1;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . exon 89 310 . - . ID=g6430.t1.exon5;Parent=g6430.t1 NODE_4050_length_2281_cov_24.918 . CDS 89 310 . - 0 ID=cds.g6430.t1;Parent=g6430.t1;3_prime_partial=true #PROT g6430.t1 g6430 MLLFDITIIATFRYRAASPDEEALVRAAAALGVRFVDRDSVGVEVRVGLSGGVERYEVLNTLSFSSDRRRMSVVLRELPGPRLGQGGRIRIITKGADDVIMARLSQADADIAAASRVQIDAFASQGLRTLCLAHRYLTAEEYAEWTVRFQLANRSLADRDQALDAVYELLESNLRLLGATAIEDRLQDGVPQTISRLRSANIRFWMLTGDKYSTAIQIATSCNLMAPAPEGQLLTIRGSSEEEIGTSLEQTSAKVRRLPPASRYSVIIEGSSLGHVLSNHVTKAEFLSLGLAAQTVICCRVTPAQKGS # ORIGINAL: g11109.t1 original gene structure, not modified by PASA NODE_2890_length_4831_cov_30.2185 AUGUSTUS gene 1583 2368 . - . ID=g11109;Name=g11109.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS mRNA 1583 2368 . - . ID=g11109.t1;Parent=g11109;Name=g11109.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS exon 1583 2368 . - . ID=g11109.t1.exon1;Parent=g11109.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS CDS 1583 2368 . - 0 ID=cds.g11109.t1;Parent=g11109.t1 #PROT g11109.t1 g11109 MRLASFDVGIRHLAFCILEFDRGDYHIINWELVDVVSEGTAVGKTCCSCALSAKYRDASNVAWCGRHIQRSQHCVIAADCVKCGGSKTTAAAMATGCFCVACARLEWAVPSKLPIPKDIKTMKSLIVRALNKRQHVLLNVDFVVIENQPSLKNGSMKAVADLIFDWYVIRESDGHNYTINFMSPTNKLKLFADDSVAPPADYGDRKDMAVAHTTRLLAAKGWSDEQEYLGFFKKQNDLCDAFLQGVWAINERYAAHHKLVC* # ORIGINAL: g11108.t1 original gene structure, not modified by PASA NODE_2890_length_4831_cov_30.2185 AUGUSTUS gene 24 536 . - . ID=g11108;Name=g11108.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS mRNA 24 536 . - . ID=g11108.t1;Parent=g11108;Name=g11108.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS exon 24 536 . - . ID=g11108.t1.exon1;Parent=g11108.t1 NODE_2890_length_4831_cov_30.2185 AUGUSTUS CDS 24 536 . - 0 ID=cds.g11108.t1;Parent=g11108.t1 #PROT g11108.t1 g11108 MSQQVFDTIVVCLEELKTQLHQRDLEIARLKSSAWMNSGTSASVATAQAITRPAVSVAVAPPKEKTRRDPNAPKKARSAYTIYMMEVRQDVQRDNPEAKQADLLKIIGPRWKALSEEERKPYLQKATVDKGRYDSEIAAYNARNGLPPAPVQQETLSAVDSTLTVAEPDL* # ORIGINAL: g5296.t1 original gene structure, not modified by PASA NODE_1078_length_14148_cov_53.7483 AUGUSTUS gene 10636 11390 . - . ID=g5296;Name=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS mRNA 10636 11390 . - . ID=g5296.t1;Parent=g5296;Name=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 11388 11390 . - . ID=g5296.t1.exon1;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 11388 11390 . - 0 ID=cds.g5296.t1;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 11169 11283 . - . ID=g5296.t1.exon2;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 11169 11283 . - 0 ID=cds.g5296.t1;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 10905 11008 . - . ID=g5296.t1.exon3;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 10905 11008 . - 2 ID=cds.g5296.t1;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 10636 10794 . - . ID=g5296.t1.exon4;Parent=g5296.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 10636 10794 . - 0 ID=cds.g5296.t1;Parent=g5296.t1 #PROT g5296.t1 g5296 MAEVNPKAYPLSNPQLTVTILDLVQQAANYKQLKKGANEATKTLNRGIAEFIVMAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTVNEGSQLKSQILSLKIEIEKLLI* # ORIGINAL: g5294.t1 original gene structure, not modified by PASA NODE_1078_length_14148_cov_53.7483 AUGUSTUS gene 5702 7868 . - . ID=g5294;Name=g5294.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS mRNA 5702 7868 . - . ID=g5294.t1;Parent=g5294;Name=g5294.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 6310 7868 . - . ID=g5294.t1.exon1;Parent=g5294.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 6310 7868 . - 0 ID=cds.g5294.t1;Parent=g5294.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 5702 6131 . - . ID=g5294.t1.exon2;Parent=g5294.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 5702 6131 . - 1 ID=cds.g5294.t1;Parent=g5294.t1 #PROT g5294.t1 g5294 MKSFACFVVALLVCAAASVSAAKEKSETKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLVGDAAKNQLTTNPANTVFDAKRLVGREWSDQTVQRDLKYWPFKVIGKNGKPAIKVSVNGQDKVFTPEEISAMVLGKMKETAEAYLSKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGQDFDQRVMEHFINLYKKKTGRDPSSDSRAVQKLRREVEKAKRALSNQHQARIEIESFFDGEDFSETLTRAKFEELNMDLFKATMVPVRKVLEDGDMRKEDIDEIVLVGGSTRIPKVQQLVKDFFNGKEPSRGINPDEAVAYGAAVQGGVLSGEQDTGDLVLLDVNPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVSNEGLLHVSAQDKGSGSKNAITITNDQNRLTPDDIERMVADAEKFAEEDKKFKERVDARNELESQAYSLKTQLNDNEKLGGKVSEDDKATIIEKVEEVIKWLESNQGAETDEFKEKKKELEAVSNPIISKLYAQGGAPPPGGEAHDGEEGEHDEL* # PASA_UPDATE: g5293.t1, single gene model update, valid-1, status:[pasa:asmbl_294,status:12], valid-1 NODE_1078_length_14148_cov_53.7483 . gene 2254 5105 . + . ID=g5293;Name=g5293.t1 NODE_1078_length_14148_cov_53.7483 . mRNA 2254 5105 . + . ID=g5293.t1;Parent=g5293;Name=g5293.t1 NODE_1078_length_14148_cov_53.7483 . five_prime_UTR 2254 2271 . + . ID=g5293.t1.utr5p1;Parent=g5293.t1 NODE_1078_length_14148_cov_53.7483 . exon 2254 3509 . + . ID=g5293.t1.exon1;Parent=g5293.t1 NODE_1078_length_14148_cov_53.7483 . CDS 2272 3509 . + 0 ID=cds.g5293.t1;Parent=g5293.t1 NODE_1078_length_14148_cov_53.7483 . exon 3784 5105 . + . ID=g5293.t1.exon2;Parent=g5293.t1 NODE_1078_length_14148_cov_53.7483 . CDS 3784 5026 . + 1 ID=cds.g5293.t1;Parent=g5293.t1 NODE_1078_length_14148_cov_53.7483 . three_prime_UTR 5027 5105 . + . ID=g5293.t1.utr3p1;Parent=g5293.t1 #PROT g5293.t1 g5293 MPDTRLPAIERPSSATRTTAATMGAACSSSAAVSVSGDADSRRANPVLKPAPRGSLSSTNNKSDAVNGSASRLPQVAGATSNAGASPVAVPPVRTTSNVLQVTASNAPKNSPKPPSSNSAHDMGNLSTGSGSRRSSALKYTIMDVDTLMTENREEHRTSMYPSAEFVVRRGEPIRLRIKTDVIIPDASSFQLTIIMASGGIEHEARVVSAHSVKSDSWGVTVDEVGDTSVLVSVHVPAQAAVGEYQVTLRLRPTPPSSSSTIASSSASRVIANKLISEHKIPARVIILFNPWCEKDDVFMADTDDLNEYVLAEEGFIWTGSAAKMRARPWNFGQFNNKSLAASLMLLSKISEGRRGRPVEVSREMSALVNANDEGGVLLGNWSGDYANGTKPSDWTGSAPILAQYATTGESVAFGQCWVFSGVLTTVLRCLGIPVRSVTTYDSAHDTEANATIDKYCDEAGKPLADRNSDSVWNFHVWNDVWMRRPDLPEGNDGWQAVDATPQELSGGRFATGPASLAMIRNGISGDFDVGFVTSEVNADMRTHIRQPDGTFKVVKVDTKHVGKLISTKSVGKPDRMDITALYKHAEGSALERASAANAIAGRTFVATKGSFEVHVSASKAYAGSPLTLTVNATLSDDVTEKRTVNVNLTAQLRRYTGQAIGAPLVFASQIVLSGESRTGKMIAVLNESAYLSALKEQFSIDTTVYAVCAETSEVAFETLQARVRLPGVAVNVSPEAAKVGTPATAVVKFSNPLSIPLNALRIAVEGLALTKVQVYERATVAPGEMVEASFQLNPKLSGTKGLVITVSAAEVGDICDRHELVVHDA* # ORIGINAL: g5297.t1 original gene structure, not modified by PASA NODE_1078_length_14148_cov_53.7483 AUGUSTUS gene 11991 13919 . + . ID=g5297;Name=g5297.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS mRNA 11991 13919 . + . ID=g5297.t1;Parent=g5297;Name=g5297.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 11991 13919 . + . ID=g5297.t1.exon1;Parent=g5297.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 11991 13919 . + 0 ID=cds.g5297.t1;Parent=g5297.t1 #PROT g5297.t1 g5297 MAAVVGSNPVIGREVVGVSFSVFSAEEIRRLSVKKITNPVLFDNLNNATKNGLYDPALGPTDKDEACATCALNFVHCPGHLGHIDLALPVYNPTFFNAMFQLLRCTCLYCHRMKATAVRMRRLLVQLRLLDFGLLLDAMDIENSCTPATATDGEKKDYVSEEIAAIDAYYMNALARGGLDPKRSVPNHRLKTRHTGDLRRQLVNEFLKTTASAKRCNHCLAIARTLRRDGYSKIFVLPLAKKHQAKLDAKALKEKALSNAHGGTDSDEDEEDEEDEDVEMEEVAATDSSKKGKNKKGKNSKKKSDSDSDSDSDSNSDSDDSDADDAPKGKGGAKGGQAKAPKASKAAVDKKPVGGVDTKKTGDKKHAASSNEASFMSPVDARTHLESMWEIDGELATLIYGALRIDGRGGPARRMGSAGMFFLDVIPVPPSRFRPASKMGDQVFENPQNVYLGNVLRTNVQLLELRAVKEKAAGPGGAAVATTPDISRVVNTWIQLQTEVNCLMDSALGPTSGGKPTGPAGIRQTLEKKEGLFRKHMMGKRVNYAARSVISPDPYIETSEIGMPQIFAKRLTYPEPVTPFNVEELRAAVINGPDIHPGATHIQHENGTLSSLANFGVDGRTALANQLLTPHTSADGTPLPGKK # PASA_UPDATE: g5295.t1, single gene model update, valid-1, status:[pasa:asmbl_295,status:3], valid-1 NODE_1078_length_14148_cov_53.7483 . gene 8578 9747 . + . ID=g5295;Name=g5295.t1 NODE_1078_length_14148_cov_53.7483 . mRNA 8578 9747 . + . ID=g5295.t1;Parent=g5295;Name=g5295.t1 NODE_1078_length_14148_cov_53.7483 . five_prime_UTR 8578 8619 . + . ID=g5295.t1.utr5p1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . exon 8578 8712 . + . ID=g5295.t1.exon1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . CDS 8620 8712 . + 0 ID=cds.g5295.t1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . exon 8998 9101 . + . ID=g5295.t1.exon2;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . CDS 8998 9101 . + 0 ID=cds.g5295.t1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . exon 9235 9364 . + . ID=g5295.t1.exon3;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . CDS 9235 9364 . + 1 ID=cds.g5295.t1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . exon 9651 9747 . + . ID=g5295.t1.exon4;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . CDS 9651 9692 . + 0 ID=cds.g5295.t1;Parent=g5295.t1 NODE_1078_length_14148_cov_53.7483 . three_prime_UTR 9693 9747 . + . ID=g5295.t1.utr3p1;Parent=g5295.t1 #PROT g5295.t1 g5295 MPPRKDAARETTTTPKSLWSRAFAKGAEFEKDELLDVLYWIRQIISVILGVIWGIVPLTGAFGLVSYCALSSAVVYGHFSAVLGLDEEEFGGAWDLIKEGFMPGFALFLVSWITVYSGLHFD* # ORIGINAL: g5292.t1 original gene structure, not modified by PASA NODE_1078_length_14148_cov_53.7483 AUGUSTUS gene 102 1657 . - . ID=g5292;Name=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS mRNA 102 1657 . - . ID=g5292.t1;Parent=g5292;Name=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 1044 1657 . - . ID=g5292.t1.exon1;Parent=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 1044 1657 . - 0 ID=cds.g5292.t1;Parent=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 699 816 . - . ID=g5292.t1.exon2;Parent=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 699 816 . - 1 ID=cds.g5292.t1;Parent=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS exon 102 314 . - . ID=g5292.t1.exon3;Parent=g5292.t1 NODE_1078_length_14148_cov_53.7483 AUGUSTUS CDS 102 314 . - 0 ID=cds.g5292.t1;Parent=g5292.t1 #PROT g5292.t1 g5292 MDETTNATATVVAPHNEMRTGEQADLPPSYSQLTNSSDGGSSVEASVVTDAGVGVGLTSASSSHSNGQSAELPVDADSAVHGAIGRRATVSRQASLALSDASSSDGSGRRNSVHPNGSVIVELDEIPEDAHVAVPAMESSSQPEKPGRASCRPNPMYKTNIVSRYTFWWLNPLFSEGSKRQLDDEDLYELADQDRSQLLTDGLLRAWDVEGSACKGDRKPQLWRAFARVFGLRFFWIGVISLLELGCQISQPILLSYLIAFFADESEPVLNGYLYAMGLVLGLASHAFMHHLYFFLTMRMGMQMRIAAIGAVYKK # PASA_UPDATE: g8959.t1, single gene model update, valid-1, status:[pasa:asmbl_2977,status:3], valid-1 NODE_1905_length_8639_cov_35.7193 . gene 3655 6123 . + . ID=g8959;Name=g8959.t1 NODE_1905_length_8639_cov_35.7193 . mRNA 3655 6123 . + . ID=g8959.t1;Parent=g8959;Name=g8959.t1 NODE_1905_length_8639_cov_35.7193 . five_prime_UTR 3655 3804 . + . ID=g8959.t1.utr5p1;Parent=g8959.t1 NODE_1905_length_8639_cov_35.7193 . exon 3655 6123 . + . ID=g8959.t1.exon1;Parent=g8959.t1 NODE_1905_length_8639_cov_35.7193 . CDS 3805 6021 . + 0 ID=cds.g8959.t1;Parent=g8959.t1 NODE_1905_length_8639_cov_35.7193 . three_prime_UTR 6022 6123 . + . ID=g8959.t1.utr3p1;Parent=g8959.t1 #PROT g8959.t1 g8959 MNIPLSIFVAAVCLVGAVVVPFASAADYMWQGGNTLRDWNSTAQWLRGTAPASASYPCTGQSVEMPSNSSLTVRGRSRAGNIILYSGIRIQFPTRSVLQVKNTRPNEQWCSVSTMGPTSPPTLGSARLPAVVDVFVGRPWTMVLDASTLFQDAGDGESLAFDVSFNPNPDTRYTTSVSYNPNTRTISANFPSMYNARNEGVAGGINVTVYARNSNPVAAMQSMVIRPKPDLDVEGINNAVLEYQSRTIFKGFNTIRVNAPTGRQIKIVFILDRIGDGQLVGGIGSNFKNEPNAPISWTCSGSVPTVNNLLETLVFMPKHFQQNVEIQITVTDDKGSDPITGRIYLSNPSPYNTPPRLRYAGSSVKTDAMKFTTGSKFFIDLSESFIDEDTELQGDQLTYRLVYLSPNGHVLPLNNSEVANWGATLDPISGIFTGVPVLAGGYQFRATATDLQRTSTDAYVNMNVENPPPPEADKSTADKQSTMDVIIAFVATFGSMAIAVTMWGLIQLSKQMRTRGNRHLNPLAYYVQRELAMESVGKFTSGHEYGSEAGVHFHENVRDIAKEFSSRVEAAAAESKRSGNPAVNKDLLEEWKSLGAEAERTVFKEDAPLLFDMMRSYGILVARAAMAIPAIKRSGPIVNLKRIKIQLFSGIEPSHFKIFRSDIVDEMLRLVFIAEEQSNLLIERQERLVQEDVRIAANAQSGSLRAPRRALNKAAESQEFLELSASTYERPLSVVSAD* # ORIGINAL: g8958.t1 original gene structure, not modified by PASA NODE_1905_length_8639_cov_35.7193 AUGUSTUS gene 39 3022 . - . ID=g8958;Name=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS mRNA 39 3022 . - . ID=g8958.t1;Parent=g8958;Name=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 2879 3022 . - . ID=g8958.t1.exon1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 2879 3022 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 2602 2646 . - . ID=g8958.t1.exon2;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 2602 2646 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 2374 2445 . - . ID=g8958.t1.exon3;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 2374 2445 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 2119 2235 . - . ID=g8958.t1.exon4;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 2119 2235 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 1753 1860 . - . ID=g8958.t1.exon5;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 1753 1860 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 1345 1449 . - . ID=g8958.t1.exon6;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 1345 1449 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 900 1058 . - . ID=g8958.t1.exon7;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 900 1058 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 540 671 . - . ID=g8958.t1.exon8;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 540 671 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 39 236 . - . ID=g8958.t1.exon9;Parent=g8958.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 39 236 . - 0 ID=cds.g8958.t1;Parent=g8958.t1 #PROT g8958.t1 g8958 MTTTLKFAAGFRAAGVRCGMKKDKLDKALDMAMIASNTPCTAAAVFTKNKFKAAPVLFSKSVLDSNSDNIYGVLINSGCANACTGDEGYKNATEMAMTATQLLRPGATKPHTLVMSTGVIGQHLDMNKIKKGAGLAHADLAAKSVEEGWNNASRAIMTTDTVPKLISSQFTLGGGPVNVSGIAKGAGMIHPNMATMLGILVTDAKVAAAPLAEALKYAVDRSFNCISIDGDTSTNDSVYLLANGQAPNAEAVNDTTSDAYVRFRDGLTRIAKDLAIKLVRDGEGATKFASITVQNASTFEEARTVASSVATSNLVKTALYGEDANWGRILCAVGYSGAEINTQKVNMWISASKDGEVATQ # ORIGINAL: g8960.t1 original gene structure, not modified by PASA NODE_1905_length_8639_cov_35.7193 AUGUSTUS gene 7516 8440 . - . ID=g8960;Name=g8960.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS mRNA 7516 8440 . - . ID=g8960.t1;Parent=g8960;Name=g8960.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 8081 8440 . - . ID=g8960.t1.exon1;Parent=g8960.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 8081 8440 . - 0 ID=cds.g8960.t1;Parent=g8960.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS exon 7516 7593 . - . ID=g8960.t1.exon2;Parent=g8960.t1 NODE_1905_length_8639_cov_35.7193 AUGUSTUS CDS 7516 7593 . - 0 ID=cds.g8960.t1;Parent=g8960.t1 #PROT g8960.t1 g8960 MRVFSYTTLLVAVALAVSRAKAAAADVCEIRTSDSDDLVLTAVSGKSISLQNAGTIDLDAPVVMFRDSRRLKVAVNSAFDSVNAAQALTQTKVDGLQVSVTGVQNELSQLQRRVQDLATQNTMLQDQVLALTGASRVKMDCAWSV* # PASA_UPDATE: g4810.t1, single gene model update, valid-1, status:[pasa:asmbl_4902,status:12],[pasa:asmbl_4907,status:12], valid-1 NODE_272_length_28557_cov_42.0998 . gene 13538 20322 . + . ID=g4810;Name=g4810.t1 NODE_272_length_28557_cov_42.0998 . mRNA 13538 20322 . + . ID=g4810.t1;Parent=g4810;Name=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 13538 13870 . + . ID=g4810.t1.exon1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 13538 13870 . + 0 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 14026 14118 . + . ID=g4810.t1.exon2;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 14026 14118 . + 0 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 14247 14416 . + . ID=g4810.t1.exon3;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 14247 14416 . + 0 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 14543 14763 . + . ID=g4810.t1.exon4;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 14543 14763 . + 1 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 14878 15035 . + . ID=g4810.t1.exon5;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 14878 15035 . + 2 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 15173 15258 . + . ID=g4810.t1.exon6;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 15173 15258 . + 0 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 15423 15487 . + . ID=g4810.t1.exon7;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 15423 15487 . + 1 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 15639 16000 . + . ID=g4810.t1.exon8;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 15639 16000 . + 2 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 16164 18154 . + . ID=g4810.t1.exon9;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 16164 18154 . + 0 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . exon 18497 20322 . + . ID=g4810.t1.exon10;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . CDS 18497 19973 . + 1 ID=cds.g4810.t1;Parent=g4810.t1 NODE_272_length_28557_cov_42.0998 . three_prime_UTR 19974 20322 . + . ID=g4810.t1.utr3p1;Parent=g4810.t1 #PROT g4810.t1 g4810 MEPAAAPAKANVDAAAVSSVASSKEDSAPLTPGDSVASSSAASSQPALSTQSSVAPSTAPSSIGSISVNFSGGQQQFANAFSDLHPKDTIREDEEEGDRIRDQSPNGRFLCYDEVLGTGAFKTVYKGLDTENAIEVAWNELKSGVLSKKERQRFIEEVDLLKQLRHPNILNFYDSWIKATKKKDIVFVTELMTSGTLKQYISRGKTIKPKVLKNWTRQILNGLHYLHTRHPPIIHRDLKCDNIFINGSNGAVKIGDMGLATTKRDSHAGSVIGTPEFMAPEMYEECYTEKVDIYAFGMCVLEMVTYEYPYSECTNAAQIFKKVTAGIRPQCIEKVKDPVTLAFIEACLEPDNKRLSVEELLEHPFFDEDQEDDEKAATVQSNASANNGPTLSTAGLDGKGVNSPTYVPDLDSGDKDHTENSPASLSIPGTPPNEPVTIREGLDSDVEFVGPQKDDVIVMSFLLYKKDPDEDVLRKKRVEFAFDIVADTARDVALEMVQSGLVLDYDLERIEMGIARVLSDYHASTEQQSRDEAAALEVKQRQQKDAEDKRQEKLKAEEVRAKEDETRRNIEEAEEEKREEERRASEATQTPFVGHGRSFSESASLAISTGSTMSQSRSQGDGIHLAHQRQMSAGDAEHPLHIQLTPPQSGVHSPRILAMHAAKGASATPRNMQKRGTRSSWPENHLIAITAVAESEGAHGRHSLPVAKPVHQRALSGGAHVPGGQTSTSDASNGALSPAVRPETKLVEKVSASLMQIAELQLKEEGNSDAHTPQAILRPSQALAQPAQTHAPLPAQSVAMPAVQQQSPQAQAAQALPALPQSQPQSQPQQPQQVAQPQQVVQPQQPTVIQQQPSTAQASVQTAAPQPQQQQQNPQPAPHAQTHAHPQQQASSSQQQRQGQLNRGSSVNSRTPGSSLNAETMQQHLATATDDHSSSHAHTRNETAATDSASTPHHPAAHSMQPQSHVGPVGHAGNVSATHGVAGRPHSQSVSSKPGANVRTGSQESILEQQHHHHHHLPHAVARHNSLPICVPAVPSEQHASNNLIQQNELHFGRDDTNTPTTNYSAMAVGRELSDDTMTSGSLTSSSGSLLTPDAAHPRMNQAKMPQRLHLIAGSIASNGNSRPQSPGHVLSGNAASQSPVPMMDEEEFEDEREWDALMARQAAERKMMVEQHAREKADLIERQRIRHLNAINRTTMMATTMTAAMYSIHAAGASTNGNAGASQHQSAVASASGDTPQNGSGSSDDPNNRKQNIEMAMQQISQLEMRALEELDSTLGLKVRSAVTGSTPTAAASARGSVEGASVTQAVPPQQSMTKHSSHPAIPSLAVGQGGPVSAGTATAVPPQSVPAAVAAGGSASRPQSGVHAPNAHHSTVPPSQQPSPQMPLASPSSATQPQQISSSIQAATHAQQQQQQQQQQQQQQQQQQQQHVVAAAAAAAAAAFPASMPIPPQASAFVSPGYGPVQVVPATNPVAPFVAVAPGYVAVPPYPTVAPGQPSFAPAAAAPIGYVAAPAPQMGYVMANGQGPEWAIVGAQGIQTIPVGAPLPAGMQPAQQQAVAKGKGQSLNELSSIQRGIQLQRFAAQPFPEGAALLGGSPTLMSAGLGGLAANGGMGQPQLLPNGAVVLPSPSPQLASQALPAGYMVNGHADYSG* # PASA_UPDATE: g4811.t1, single gene model update, valid-1, status:[pasa:asmbl_4903,status:12],[pasa:asmbl_4905,status:12], valid-1 NODE_272_length_28557_cov_42.0998 . gene 20727 22017 . - . ID=g4811;Name=g4811.t1 NODE_272_length_28557_cov_42.0998 . mRNA 20727 22017 . - . ID=g4811.t1;Parent=g4811;Name=g4811.t1 NODE_272_length_28557_cov_42.0998 . five_prime_UTR 21971 22017 . - . ID=g4811.t1.utr5p1;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . exon 21913 22017 . - . ID=g4811.t1.exon1;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . CDS 21913 21970 . - 0 ID=cds.g4811.t1;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . exon 21538 21737 . - . ID=g4811.t1.exon2;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . CDS 21538 21737 . - 2 ID=cds.g4811.t1;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . exon 20727 21417 . - . ID=g4811.t1.exon3;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . CDS 20794 21417 . - 0 ID=cds.g4811.t1;Parent=g4811.t1 NODE_272_length_28557_cov_42.0998 . three_prime_UTR 20727 20793 . - . ID=g4811.t1.utr3p1;Parent=g4811.t1 #PROT g4811.t1 g4811 MARFLAFVCMAVLAFVAVDAETEDERAWRAAFAEWQAAFDDWKQGNSCDQSRCPGMTDAELIASRSASIGRYTSALLASVDIPTFQYLVRSALEPDVVLNVPATGAWTGVESVVEYTAVTKPSLNGGLYQINKYDINQDSVRWNGDTMSFTTSEEFFWPTLIGTDLHDVTLQLSSNYSVTFSTCSPLIKSMVVDIDPRTVPRGSPVNITQLCGGIMQTCTGDNIQYDGFVDCFLFMSSLPNSCGTYALKGNTQFCREFHLLNALINPNVHCKHTGKSGGGVCVSSVACPEPSK* # PASA_UPDATE: g4808.t1, single gene model update, valid-1, status:[pasa:asmbl_4901,status:12],[pasa:asmbl_4904,status:12], valid-1 NODE_272_length_28557_cov_42.0998 . gene 1789 6325 . - . ID=g4808;Name=g4808.t1 NODE_272_length_28557_cov_42.0998 . mRNA 1789 6325 . - . ID=g4808.t1;Parent=g4808;Name=g4808.t1 NODE_272_length_28557_cov_42.0998 . five_prime_UTR 6223 6325 . - . ID=g4808.t1.utr5p1;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . exon 6146 6325 . - . ID=g4808.t1.exon1;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . CDS 6146 6222 . - 0 ID=cds.g4808.t1;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . exon 4938 5885 . - . ID=g4808.t1.exon2;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . CDS 4938 5885 . - 1 ID=cds.g4808.t1;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . exon 1789 4651 . - . ID=g4808.t1.exon3;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . CDS 1843 4651 . - 1 ID=cds.g4808.t1;Parent=g4808.t1 NODE_272_length_28557_cov_42.0998 . three_prime_UTR 1789 1842 . - . ID=g4808.t1.utr3p1;Parent=g4808.t1 #PROT g4808.t1 g4808 MDLTWAMADGAGQDVIIAEREAAGVGHSQHYTVMPKEEGDICHTTLPDMRGDEANLSIHINLIDVGSSDGQAKKTDSRKRLPTPRIKVTFEARNDVAEDWMMGDGASVRVSARLVNHPYGPAGPALDWAEMGSLPLVWLESSPPSHPTPSSPFVRQSFTTPPGSHLGQVSTTLFKEGPAHGKDVSEGTWKESFYVELTKSRVSAEGDVLFEILGLKKTRIGPFKIVTAQAAAQRDERKPPDVRENLEIIQRAISSNSEATKRLKALAKMIPALRGADADSDDSGDADTVRGSGVAAGERVAAASEDAVRRAIRCEIAEMAEMVKGLALGGNADSKLDGMVPSDIESEIQRKAQAMLQRLQQSRHNTSNGTLHVTFLAGQEASLDAHKELEAIRNSVPRGSVSRVLGASGDDLIRAIQSQPTNDGGGLDIFHLSFHGSESGLQFAAPSHPGGIGRGSCGCGGGGALHPASSIMPRERIALAVREVRTTFSNAIVVISACCSAKTAAALSDALNIPVLYPEDNDVECKQAISWAQKFYAYMGDSGDNTYTKALEFANASSCMYPIGGTAQHDSDADSDADSDADFDAELDRQASGLRFKVVLPGASAALKPRAYQTEIANACFPSANLFTNTMVVAPTNSGKTMVMAMAMCRIRRERGTQRGAIIVLSPTGLLARQHSKRLPELLESLGAPGSDACNVELWGARGSSATLRSWISNDYVLSMTAGAFCNALKTNAELLLNVAMIVFDECHSCYDNSPYQMIMQDYWRPLFIAGEAAVPHVLALTATPFVPNVTAPEGFKTLCGNLCCGNIAAVVKETESLQEAIGFPVSTEACLVARGCGVAGQATAILVEFLHIVRNRLAHLGVYHEMNMDTLPTRPHAFGRLNELAASMKKDGVAAVDQSQKALACAVEAIAEAAYVLATIGERAALIVFCAYLEQEGNVREAETVAFMRAASSPVQAARRAMAAGAAVLTRRSPLVEALVEQLRALPGQTIVMCTTTVECVELHRELSQMLGATHTPALLVGSQNPTEQSKSYDAFRGGKADILVTTKIANCGADFPDCVRLVAFALGTNTVEHVQARGRVRKPGGKFIVVDFADSDARRRIDSAEAEHREHEQVIRKHAAKRNAMIDVVRDEYQLQLHYDKEKQRGESVKASQMAERARAIENISNYGVFCNRCDDNKDGPICSAQSLILYDGAQMCAQKVGFLDRRLKAVGDALECRLCRTTIAHTFRIRRERLHLPAFKTPHIHLRDLRTGKTVRGVDIREQFNLPTGGLPAP* # PASA_UPDATE: g4809.t1, single gene model update, valid-1, status:[pasa:asmbl_4906,status:3], valid-1 NODE_272_length_28557_cov_42.0998 . gene 6881 11993 . + . ID=g4809;Name=g4809.t1 NODE_272_length_28557_cov_42.0998 . mRNA 6881 11993 . + . ID=g4809.t1;Parent=g4809;Name=g4809.t1 NODE_272_length_28557_cov_42.0998 . five_prime_UTR 6881 6932 . + . ID=g4809.t1.utr5p1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 6881 6959 . + . ID=g4809.t1.exon1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 6933 6959 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 7114 7247 . + . ID=g4809.t1.exon2;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 7114 7247 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 7460 7598 . + . ID=g4809.t1.exon3;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 7460 7598 . + 1 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 7795 7914 . + . ID=g4809.t1.exon4;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 7795 7914 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 8109 8271 . + . ID=g4809.t1.exon5;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 8109 8271 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 8468 8608 . + . ID=g4809.t1.exon6;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 8468 8608 . + 2 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 8754 8890 . + . ID=g4809.t1.exon7;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 8754 8890 . + 2 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 9129 9389 . + . ID=g4809.t1.exon8;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 9129 9389 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 9560 9907 . + . ID=g4809.t1.exon9;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 9560 9907 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 10060 10132 . + . ID=g4809.t1.exon10;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 10060 10132 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 10279 10358 . + . ID=g4809.t1.exon11;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 10279 10358 . + 2 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 10512 10561 . + . ID=g4809.t1.exon12;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 10512 10561 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 10831 10938 . + . ID=g4809.t1.exon13;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 10831 10938 . + 1 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 11052 11344 . + . ID=g4809.t1.exon14;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 11052 11344 . + 1 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 11482 11603 . + . ID=g4809.t1.exon15;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 11482 11603 . + 2 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . exon 11718 11993 . + . ID=g4809.t1.exon16;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . CDS 11718 11861 . + 0 ID=cds.g4809.t1;Parent=g4809.t1 NODE_272_length_28557_cov_42.0998 . three_prime_UTR 11862 11993 . + . ID=g4809.t1.utr3p1;Parent=g4809.t1 #PROT g4809.t1 g4809 MYRLPSQAKVLPRAAAAVRNYATAPNRVAMSRLEPDQYINFDKVRERLQIVSKRLARPLTLSEKIVYGHLEDPKNQEIVRGKSYLKLRPDRVAMQDATAQMAMLQFISSGLPKVQVPSTIHCDHLIEAQKGGSADLARAKDINKEVYNFLETAGAKYGVGFWKPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMADIPWELKCPKVIGVELTGELKGWTAPKDIILKLAGILTVKGGTGAIIEYYGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMNAYLKSTSRGDIANLVDANKDILSSDSKAVYDQVVKINLSDLEPHINGPFTPDLAHPLSKFKSEVIKNNWPVEVKVGLIGSCTNSSYEDMGRSASVARQALAHGTKAKAQFVVTPGSEQIRATIERDGLAKDLSDIGGVVLANACGPCIGQWDRRDVKKGEKNSIITSYNRNFSARNDANPATHCFVASPEITTAFAIAGRLDFNPETDELVGANGEKYRLTSPTAIELPPRGFDPGENTYQHPPKDSSKIRVDVDPKSDRLQLLSPFNKWNGKDLVDMPVLIKAKGKCTTDHISAAGPWLKYRGHLDNISNNLLIGAINAENGKANSVKNQFTGEYGAVPDIARQYKKQGIQWVVVGDENYGEGSSREHAALEPRHLGGIAIIVRSFARIHETNLKKQGLLPLTFANPADYDKINPEDRVSIVGLSNLTPGVALKAIITRADKSKYEILLNHTMNEGQIEWFRAGSALNRMAEIKAEKK* # PASA_UPDATE: g4807.t1, single gene model update, valid-1, status:[pasa:asmbl_4900,status:12], valid-1 NODE_272_length_28557_cov_42.0998 . gene 74 866 . + . ID=g4807;Name=g4807.t1 NODE_272_length_28557_cov_42.0998 . mRNA 74 866 . + . ID=g4807.t1;Parent=g4807;Name=g4807.t1 NODE_272_length_28557_cov_42.0998 . exon 74 866 . + . ID=g4807.t1.exon1;Parent=g4807.t1 NODE_272_length_28557_cov_42.0998 . CDS 74 487 . + 0 ID=cds.g4807.t1;Parent=g4807.t1;5_prime_partial=true NODE_272_length_28557_cov_42.0998 . three_prime_UTR 488 866 . + . ID=g4807.t1.utr3p1;Parent=g4807.t1 #PROT g4807.t1 g4807 RLTFIIAYWAHPTHHVRCLENPLFQTITLTLFIPTLMHCTNYGRTQPPRVNQENVKGVVYLRGATISKTKFGMKSLVIKIEPKVGRKPGWDVDETAVFYVAASNQQELDEWFEALNTTATTPAPSTPLPAGPPASEF* # PASA_UPDATE: g4813.t1, single gene model update, valid-1, status:[pasa:asmbl_4908,status:12], valid-1 NODE_272_length_28557_cov_42.0998 . gene 24691 28389 . + . ID=g4813;Name=g4813.t1 NODE_272_length_28557_cov_42.0998 . mRNA 24691 28389 . + . ID=g4813.t1;Parent=g4813;Name=g4813.t1 NODE_272_length_28557_cov_42.0998 . five_prime_UTR 24691 24840 . + . ID=g4813.t1.utr5p1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 24691 24950 . + . ID=g4813.t1.exon1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 24841 24950 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 25191 25320 . + . ID=g4813.t1.exon2;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 25191 25320 . + 1 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 25564 25622 . + . ID=g4813.t1.exon3;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 25564 25622 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 25908 26019 . + . ID=g4813.t1.exon4;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 25908 26019 . + 1 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 26248 26277 . + . ID=g4813.t1.exon5;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 26248 26277 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 26675 26722 . + . ID=g4813.t1.exon6;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 26675 26722 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 26970 27084 . + . ID=g4813.t1.exon7;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 26970 27084 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 27249 27320 . + . ID=g4813.t1.exon8;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 27249 27320 . + 2 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 27604 27683 . + . ID=g4813.t1.exon9;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 27604 27683 . + 2 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 27880 27958 . + . ID=g4813.t1.exon10;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 27880 27958 . + 0 ID=cds.g4813.t1;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . exon 28280 28389 . + . ID=g4813.t1.exon11;Parent=g4813.t1 NODE_272_length_28557_cov_42.0998 . CDS 28280 28389 . + 2 ID=cds.g4813.t1;Parent=g4813.t1;3_prime_partial=true #PROT g4813.t1 g4813 MADEVYVGTELNGTVFEVPRNYTQLQTIGMGAFGQVCSAVDVHKGKNVAIKKVLKPFQTAIHAKRTYREIRLLRHMRHENVIGLDDLFTPAKTIDQFNDVYLVTEKMGADLNNIVRTQQLSDDHVQFLVYQILRGLKYVHSAGIIHRDLKPSNVAVNENCDLKILDFGLARVADPEMTGYVATRWYRAPEIMLSWKKYDKGVDIWSVGCIMAELLTGKPLFPGTDHVNQLTLITEIVGTPDERTIKNIESETARAYVMSMPKHKKVPFTQIFPGGNPDAIDLLEKMLIFEPANRITASQALAHRYFATLHDPDDE # ORIGINAL: g4812.t1 original gene structure, not modified by PASA NODE_272_length_28557_cov_42.0998 AUGUSTUS gene 22629 24018 . + . ID=g4812;Name=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS mRNA 22629 24018 . + . ID=g4812.t1;Parent=g4812;Name=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS exon 22629 22788 . + . ID=g4812.t1.exon1;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS CDS 22629 22788 . + 0 ID=cds.g4812.t1;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS exon 22920 23032 . + . ID=g4812.t1.exon2;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS CDS 22920 23032 . + 2 ID=cds.g4812.t1;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS exon 23139 23231 . + . ID=g4812.t1.exon3;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS CDS 23139 23231 . + 0 ID=cds.g4812.t1;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS exon 23851 24018 . + . ID=g4812.t1.exon4;Parent=g4812.t1 NODE_272_length_28557_cov_42.0998 AUGUSTUS CDS 23851 24018 . + 0 ID=cds.g4812.t1;Parent=g4812.t1 #PROT g4812.t1 g4812 MGKPPHTSPHGRPNGGGGGFAKREDSSDFQRRKSNGLSLSKFANARGGTFVSHKKEAARIRKLKTVASYKKLLKREGIASGSSGPQINEDQQNQDEVPDKSDPVPVSRVDERVVERDPSEEKDKEAARIERAMALREQQRKRHDVARKLGQRTKRGQPILSHQIEHLLEKIQKSTQR* # ORIGINAL: g2827.t1 original gene structure, not modified by PASA NODE_4824_length_1222_cov_83.4359_potentialcontaminant AUGUSTUS gene 1 1176 . - . ID=g2827;Name=g2827.t1 NODE_4824_length_1222_cov_83.4359_potentialcontaminant AUGUSTUS mRNA 1 1176 . - . ID=g2827.t1;Parent=g2827;Name=g2827.t1 NODE_4824_length_1222_cov_83.4359_potentialcontaminant AUGUSTUS exon 1 1176 . - . ID=g2827.t1.exon1;Parent=g2827.t1 NODE_4824_length_1222_cov_83.4359_potentialcontaminant AUGUSTUS CDS 1 1176 . - 0 ID=cds.g2827.t1;Parent=g2827.t1 #PROT g2827.t1 g2827 MASVVSFSSLPLEIVVHNIAPFLGNADLSSLSKVNSSLHAHLRHVRLFHLWPMYNRKYIEDSQFRDEVRATIPVDRLVLVSFDGDLQDLSAFKGVHSALFLIRGRTGSTCSASDLSPLKGVHTVELSFHSESPDFLTPLANAQVVRITELNCFIKVPTFRKAKSVDIRNGRLDLNDLTGIPRVTLGGGYTEPGTRFQDVSPLRLARFVELRSQKELEDLSCLESAREVVIHDCPRIVTLPPATYLRAFTWHDSPLTAIPPELGKLRFLDLSCASELEDVSAARNVHELILRKCFLLNDVSALGSVHTLRISSVGPVLNVSALSEVHTLEFFDVNLVGVAKLTGVHYLSLYSARFDVQELSKLGTVHTLSLPLVAIEDVSTLGGVHTLLFERN # ORIGINAL: g9094.t1 original gene structure, not modified by PASA NODE_2214_length_7225_cov_38.619 AUGUSTUS gene 299 1234 . + . ID=g9094;Name=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS mRNA 299 1234 . + . ID=g9094.t1;Parent=g9094;Name=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 299 690 . + . ID=g9094.t1.exon1;Parent=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 299 690 . + 0 ID=cds.g9094.t1;Parent=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 880 967 . + . ID=g9094.t1.exon2;Parent=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 880 967 . + 1 ID=cds.g9094.t1;Parent=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 1136 1234 . + . ID=g9094.t1.exon3;Parent=g9094.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 1136 1234 . + 0 ID=cds.g9094.t1;Parent=g9094.t1 #PROT g9094.t1 g9094 MASTAYLEKGTFSPFTSADAEMPAQPLMLTGGCTPVDESASSVAVNDAFYMACFYGAVIVVRQLLSDARVDPMAFGNRAVKCAIRRQHTDVVREIIGCERFLPTTATLHSILKRAKRFGSYDIIEMILDKRALRQIAFPISHATVLKCATNTIADFLCLKVVLNPYHPLGFRWINRTFSDILSSRPETPSMQ* # PASA_UPDATE: g9096.t1, single gene model update, valid-1, status:[pasa:asmbl_3789,status:12], valid-1 NODE_2214_length_7225_cov_38.619 . gene 6202 6941 . - . ID=g9096;Name=g9096.t1 NODE_2214_length_7225_cov_38.619 . mRNA 6202 6941 . - . ID=g9096.t1;Parent=g9096;Name=g9096.t1 NODE_2214_length_7225_cov_38.619 . five_prime_UTR 6862 6941 . - . ID=g9096.t1.utr5p1;Parent=g9096.t1 NODE_2214_length_7225_cov_38.619 . exon 6763 6941 . - . ID=g9096.t1.exon1;Parent=g9096.t1 NODE_2214_length_7225_cov_38.619 . CDS 6763 6861 . - 0 ID=cds.g9096.t1;Parent=g9096.t1 NODE_2214_length_7225_cov_38.619 . exon 6202 6465 . - . ID=g9096.t1.exon2;Parent=g9096.t1 NODE_2214_length_7225_cov_38.619 . CDS 6232 6465 . - 0 ID=cds.g9096.t1;Parent=g9096.t1 NODE_2214_length_7225_cov_38.619 . three_prime_UTR 6202 6231 . - . ID=g9096.t1.utr3p1;Parent=g9096.t1 #PROT g9096.t1 g9096 MRSGHLAMRDSNDKYRVCWFVLDHQYLRCFKSQYHEVAIVAIRATDICAIGREIKRTHNPPYRITIGSSNRSPLHLGTYTATERDSWMEALNALLTLLERRRSKTTMHSV* # ORIGINAL: g9095.t1 original gene structure, not modified by PASA NODE_2214_length_7225_cov_38.619 AUGUSTUS gene 1838 5119 . - . ID=g9095;Name=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS mRNA 1838 5119 . - . ID=g9095.t1;Parent=g9095;Name=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 5015 5119 . - . ID=g9095.t1.exon1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 5015 5119 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 4125 4781 . - . ID=g9095.t1.exon2;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 4125 4781 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 3446 3883 . - . ID=g9095.t1.exon3;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 3446 3883 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 3066 3187 . - . ID=g9095.t1.exon4;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 3066 3187 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 2775 2845 . - . ID=g9095.t1.exon5;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 2775 2845 . - 1 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 2459 2553 . - . ID=g9095.t1.exon6;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 2459 2553 . - 2 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 2189 2296 . - . ID=g9095.t1.exon7;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 2189 2296 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS exon 1838 1990 . - . ID=g9095.t1.exon8;Parent=g9095.t1 NODE_2214_length_7225_cov_38.619 AUGUSTUS CDS 1838 1990 . - 0 ID=cds.g9095.t1;Parent=g9095.t1 #PROT g9095.t1 g9095 MASRIVFASQWMRRSHNTANIIWSKTGSAPAWVVHRRLFATFTNENSASLLDRVDVHALRGAGTAIVDRHGSYTYADISVASRTIADTLQRAFVSRQSSGSSGSSGSSGSSGSSGSSGSRVAVLCPRDVTFPLSVLGTWAAAATVVPLSVSHPPAELEYYLDDATPAAVLVHPDHMDAIKDAASKRSIPVIPVVPPKVSAGATTRRLDASASLQVDKVSRKIATELFSRGGDSYSADDAMIVYTSGTTGKPKGVVAGMISAWEWSCSDRILHVLPLHHVHGIVNKLLCSLWAGATCEMQHSPTPQSMWSALSRDAADPDRLTLFMAVPTIYARLLETADGKGVSAENASKLRLFVSGSAALPVPILKKWEKLTGHVLLERYGMTEIGMALSNPYRGERRVGSVGMPLSGVSARIVDESGHAIDEPNKGGELYIGGASVFKCYLGRPDATKESFEGPWFKTGDTADRDADGYYRILGRTSVDILKSGGYKISALDVETVLMAHPSIAECAVVGVADEVFGQRVAAVVAPKSGQEAPSLEALREWASQRMAKYKLPTVLKIVEGVPRNAMGKVNKKELVRTMFP* # ORIGINAL: g10912.t1 original gene structure, not modified by PASA NODE_3820_length_2681_cov_42.5501 AUGUSTUS gene 76 1500 . + . ID=g10912;Name=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS mRNA 76 1500 . + . ID=g10912.t1;Parent=g10912;Name=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS exon 76 210 . + . ID=g10912.t1.exon1;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS CDS 76 210 . + 0 ID=cds.g10912.t1;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS exon 501 569 . + . ID=g10912.t1.exon2;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS CDS 501 569 . + 0 ID=cds.g10912.t1;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS exon 980 1113 . + . ID=g10912.t1.exon3;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS CDS 980 1113 . + 0 ID=cds.g10912.t1;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS exon 1275 1500 . + . ID=g10912.t1.exon4;Parent=g10912.t1 NODE_3820_length_2681_cov_42.5501 AUGUSTUS CDS 1275 1500 . + 1 ID=cds.g10912.t1;Parent=g10912.t1 #PROT g10912.t1 g10912 HEFPHDYRNGVRAWQFDPTKWFIYLLSLVGLTSKLSFYDRTTWEKARLQMKQRRIEAESQALQKKMERFDWGPEKETLPGITLIALQKISETESKIFVINDGIAHDVTLFADRHPGGRPLLQFWSCRDATAAMDGEVYRHTKNARNIMASMRTYRMVEEVEPKDESREGDGVLRRVSKVLEASLQDN* # PASA_UPDATE: g518.t1, single gene model update, valid-1, status:[pasa:asmbl_7107,status:12], valid-1 NODE_4212_length_2020_cov_27.9445 . gene 8 2020 . + . ID=g518;Name=g518.t1 NODE_4212_length_2020_cov_27.9445 . mRNA 8 2020 . + . ID=g518.t1;Parent=g518;Name=g518.t1 NODE_4212_length_2020_cov_27.9445 . five_prime_UTR 8 9 . + . ID=g518.t1.utr5p1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . exon 8 124 . + . ID=g518.t1.exon1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 10 124 . + 0 ID=cds.g518.t1;Parent=g518.t1;5_prime_partial=true NODE_4212_length_2020_cov_27.9445 . exon 347 771 . + . ID=g518.t1.exon2;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 347 771 . + 2 ID=cds.g518.t1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . exon 938 1104 . + . ID=g518.t1.exon3;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 938 1104 . + 0 ID=cds.g518.t1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . exon 1237 1267 . + . ID=g518.t1.exon4;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 1237 1267 . + 1 ID=cds.g518.t1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . exon 1489 1592 . + . ID=g518.t1.exon5;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 1489 1592 . + 0 ID=cds.g518.t1;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . exon 1903 2020 . + . ID=g518.t1.exon6;Parent=g518.t1 NODE_4212_length_2020_cov_27.9445 . CDS 1903 2020 . + 1 ID=cds.g518.t1;Parent=g518.t1;3_prime_partial=true #PROT g518.t1 g518 PAVLAASIQVEIAHCGDGYTSQPYVATRFSTCESLASTVNPNSAIGTLVPAIVLPTVATFVVLGGLLMWRLKIAKKAASRATHAQFLEKHFKVEKGAQMLSSVEISRDDIDLMEALGQGEFGTVHKALLTVMDQTRLCAAKSMRDGTTYRERVEFIAEAEVMLGLQHPNVVSLIGVSVTVEPILILIEYAPHGNVRSFIQAIASHRRGTANTLSLLGNFALQIAKGMAYLASMKIVHRDLAARNVMVGQDSFGDYVLKVADFGLSRRFELSYYRKKSKGGRLPFKWMSPEALKGMYSDKSDVWSWAVTVFELYTFGASPY # PASA_UPDATE: g10969.t1, single gene model update, valid-1, status:[pasa:asmbl_8253,status:12], valid-1 NODE_5726_length_738_cov_33.1418 . gene 129 709 . - . ID=g10969;Name=g10969.t1 NODE_5726_length_738_cov_33.1418 . mRNA 129 709 . - . ID=g10969.t1;Parent=g10969;Name=g10969.t1 NODE_5726_length_738_cov_33.1418 . five_prime_UTR 701 709 . - . ID=g10969.t1.utr5p1;Parent=g10969.t1 NODE_5726_length_738_cov_33.1418 . exon 597 709 . - . ID=g10969.t1.exon1;Parent=g10969.t1 NODE_5726_length_738_cov_33.1418 . CDS 597 700 . - 0 ID=cds.g10969.t1;Parent=g10969.t1 NODE_5726_length_738_cov_33.1418 . exon 129 333 . - . ID=g10969.t1.exon2;Parent=g10969.t1 NODE_5726_length_738_cov_33.1418 . CDS 129 333 . - 1 ID=cds.g10969.t1;Parent=g10969.t1;3_prime_partial=true #PROT g10969.t1 g10969 MDPLYQFNIKWIEEPTSPDDVIGHEAVQRAVEKHGCGVATGEHCQNRVIFKQLLQRKAISYCQIDSCRLGGVNEILAVMLMAAKFGVPVCPHAGGVGLCEHVQ # PASA_UPDATE: g7080.t1, single gene model update, valid-1, status:[pasa:asmbl_7817,status:3], valid-1 NODE_502_length_22222_cov_44.1894 . gene 17459 21893 . - . ID=g7080;Name=g7080.t1 NODE_502_length_22222_cov_44.1894 . mRNA 17459 21893 . - . ID=g7080.t1;Parent=g7080;Name=g7080.t1 NODE_502_length_22222_cov_44.1894 . five_prime_UTR 21785 21893 . - . ID=g7080.t1.utr5p1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 21725 21893 . - . ID=g7080.t1.exon1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 21725 21784 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 21429 21599 . - . ID=g7080.t1.exon2;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 21429 21599 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 21126 21234 . - . ID=g7080.t1.exon3;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 21126 21234 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 20889 20980 . - . ID=g7080.t1.exon4;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 20889 20980 . - 2 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 20459 20653 . - . ID=g7080.t1.exon5;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 20459 20653 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 20065 20244 . - . ID=g7080.t1.exon6;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 20065 20244 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 19776 19937 . - . ID=g7080.t1.exon7;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 19776 19937 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 19036 19495 . - . ID=g7080.t1.exon8;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 19036 19495 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 18688 18846 . - . ID=g7080.t1.exon9;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 18688 18846 . - 2 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 18342 18562 . - . ID=g7080.t1.exon10;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 18342 18562 . - 2 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 18123 18209 . - . ID=g7080.t1.exon11;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 18123 18209 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 17887 17994 . - . ID=g7080.t1.exon12;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 17887 17994 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . exon 17459 17724 . - . ID=g7080.t1.exon13;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . CDS 17647 17724 . - 0 ID=cds.g7080.t1;Parent=g7080.t1 NODE_502_length_22222_cov_44.1894 . three_prime_UTR 17459 17646 . - . ID=g7080.t1.utr3p1;Parent=g7080.t1 #PROT g7080.t1 g7080 MASKIFINHVETFTGRAIAKKFHNQIVGFLAKDDDSGDEAETNDSENDVKEELRYEVVGTLRDPDADVPKWVKEPLRNISREALRDVLLKCDVIIYDICEQIDQVEEALWAVEVLRKESENFDRKKVFVCLSTVLTWARTKVDRDEPDAPFTEDDYRRRKAHPNFRPHLNCEKAVVKAGKGDRSKLSTFVVATGLTYGCGENIFHFLFKSAWHGDPQELHIFGRGDNVVPTIHIEDLASSLHHIVDRQPESRYIVCVDDSKNSLEEVVKCISSNLGTGKTKKISKEDALLTKDLEQANYDMLLVDVRLDSTLIKDFKFEWVSEEGIIDNIDAIIAEYRTVRNLHPLRIMIHGPPASGKSYFAARLCSHYKLHHIRVQDVINDALRRLATSAGRVGRENGGGGDGDEDEEEANAQAEADKELLEELRESARDNAGRYSDEHVVQFFRDKLSSMPCRNQGYVLDGFPKTIEQAQELFKLPEGESYDDAKRGDPNNIMPEYVLALEASDDFLKERVMNLPEAEVAGTHNTEDGLLRRLQSYRQSNTEDDTVLNFFDEREVHPIILKSDDEPTKLFEEMSRAIGQPHNYGPTAEELAEINRLTSEERSRREAVENEERERREAEEAADRSKKEAEWKSRLEEVKRQEQEVLEAQSIPLRNYLMKHVMPTLTKGLIEVCKSRPEDPIDFLAEYLFSST* # PASA_UPDATE: g7078.t1, single gene model update, valid-1, status:[pasa:asmbl_7813,status:3], valid-1 NODE_502_length_22222_cov_44.1894 . gene 9319 14351 . + . ID=g7078;Name=g7078.t1 NODE_502_length_22222_cov_44.1894 . mRNA 9319 14351 . + . ID=g7078.t1;Parent=g7078;Name=g7078.t1 NODE_502_length_22222_cov_44.1894 . five_prime_UTR 9319 9421 . + . ID=g7078.t1.utr5p1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . five_prime_UTR 9643 9651 . + . ID=g7078.t1.utr5p2;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 9319 9421 . + . ID=g7078.t1.exon1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 9643 9791 . + . ID=g7078.t1.exon2;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 9652 9791 . + 0 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 9986 10967 . + . ID=g7078.t1.exon3;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 9986 10967 . + 1 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 11145 11241 . + . ID=g7078.t1.exon4;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 11145 11241 . + 0 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 11416 11528 . + . ID=g7078.t1.exon5;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 11416 11528 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 11753 11808 . + . ID=g7078.t1.exon6;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 11753 11808 . + 0 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 11995 12117 . + . ID=g7078.t1.exon7;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 11995 12117 . + 1 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 12253 12428 . + . ID=g7078.t1.exon8;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 12253 12428 . + 1 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 12632 12805 . + . ID=g7078.t1.exon9;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 12632 12805 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 12994 13128 . + . ID=g7078.t1.exon10;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 12994 13128 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 13421 13528 . + . ID=g7078.t1.exon11;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 13421 13528 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 13660 13746 . + . ID=g7078.t1.exon12;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 13660 13746 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . exon 13904 14351 . + . ID=g7078.t1.exon13;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . CDS 13904 14073 . + 2 ID=cds.g7078.t1;Parent=g7078.t1 NODE_502_length_22222_cov_44.1894 . three_prime_UTR 14074 14351 . + . ID=g7078.t1.utr3p1;Parent=g7078.t1 #PROT g7078.t1 g7078 MEAEGGPFVPPSGPRPAALGGGQLTLPSFTDYSIAGVLNFLHQQWTKFERERTLWESERSELLQRVAILEGERRGHDNLKRDLVRRIKMLEYALRQERAKHAGAIGGTAAPAVAPPATSAAPLTAAADESASRTKALAATGREVLRRYLGELGLTDHAIQVRVSQAERSLESLTRPREEVPSILSVTTTLPRRDEEPQTPSTPQTPAQQSDASAATSAAADVDEALSAAADAIFDAVADVSAESEAMSDFDFLQDEDDGEGESSSSSSSSGEEDDDDKEKEEKEEKSEAGEGDSSATTAPAPAPARVENVSPAPDAKDDSVPAPQQNNWLNAISKPRSSEKVSPVVAAAAAEKASPATVPTANLKDVKSASGTESFDPKFDSNQLAKVMKHWERGKKTTSKPSSGKSGVFKGKPAEMEESEFNVDDVLGELASLSVQPEQAPQEASAAAPSAKNWKPKYTLRGHYDGVRALAFHDSDHLLLTASEDHTAMLWNLRTVPPGGGKKATQSPDIEPLQTYRGHTAPIFSLAYSPLESVFFSGSADRTVKVWKLAPAELLEPFGRYDPLVCMTTLVGHTDAIWDVSSHPIHAVVLSASADGSCRVWRYGQQSPLVQSYRSHESVGVPTSTSFTPSDHNRLVTSYSDSTACVYDIETGKQIVSLASNESYDGTIGTQINKIVCHPTLPMAITAHEDKYIRYFDLNSGKCTHSMVAHLDAVSTVAVDPSGLYLLSGGHDCSVRLWDIGRKSCVQEVSSHRKKFDEGVQSLGFHPSQPYIASGGADGSVKIYV* # PASA_UPDATE: g7079.t1, single gene model update, valid-1, status:[pasa:asmbl_7814,status:12], valid-1 NODE_502_length_22222_cov_44.1894 . gene 16036 17307 . + . ID=g7079;Name=g7079.t1 NODE_502_length_22222_cov_44.1894 . mRNA 16036 17307 . + . ID=g7079.t1;Parent=g7079;Name=g7079.t1 NODE_502_length_22222_cov_44.1894 . five_prime_UTR 16036 16082 . + . ID=g7079.t1.utr5p1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . exon 16036 16176 . + . ID=g7079.t1.exon1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . CDS 16083 16176 . + 0 ID=cds.g7079.t1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . exon 16300 16434 . + . ID=g7079.t1.exon2;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . CDS 16300 16434 . + 2 ID=cds.g7079.t1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . exon 16532 16633 . + . ID=g7079.t1.exon3;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . CDS 16532 16633 . + 2 ID=cds.g7079.t1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . exon 16795 16896 . + . ID=g7079.t1.exon4;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . CDS 16795 16896 . + 2 ID=cds.g7079.t1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . exon 17044 17307 . + . ID=g7079.t1.exon5;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . CDS 17044 17165 . + 2 ID=cds.g7079.t1;Parent=g7079.t1 NODE_502_length_22222_cov_44.1894 . three_prime_UTR 17166 17307 . + . ID=g7079.t1.utr3p1;Parent=g7079.t1 #PROT g7079.t1 g7079 MSAKCAKCDKTVYSTEEIKAAGSTWHKLCFQCCDPKCGITLKLNTYKGHEGKVFCDKHVPKPTATSVMGMQTEAALNAPKKGAEGLGNVQKGTGEKPNLGADALSVSHATSAPNKDTGTTGKFQKGTGEKPTVGADSISIQHATHAPKKGAEGLGTIQKGTGSAHSLNADDIATANEAAPIDEE* # PASA_UPDATE: g7076.t1, single gene model update, valid-1, status:[pasa:asmbl_7815,status:12], valid-1 NODE_502_length_22222_cov_44.1894 . gene 103 6591 . - . ID=g7076;Name=g7076.t1 NODE_502_length_22222_cov_44.1894 . mRNA 103 6591 . - . ID=g7076.t1;Parent=g7076;Name=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 6205 6591 . - . ID=g7076.t1.exon1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 6205 6591 . - 0 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 5412 6040 . - . ID=g7076.t1.exon2;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 5412 6040 . - 0 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 5183 5264 . - . ID=g7076.t1.exon3;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 5183 5264 . - 1 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 4753 5050 . - . ID=g7076.t1.exon4;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 4753 5050 . - 0 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 4381 4562 . - . ID=g7076.t1.exon5;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 4381 4562 . - 2 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 2769 4245 . - . ID=g7076.t1.exon6;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 2769 4245 . - 0 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 1427 2629 . - . ID=g7076.t1.exon7;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 1427 2629 . - 2 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 358 1222 . - . ID=g7076.t1.exon8;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 358 1222 . - 2 ID=cds.g7076.t1;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . exon 103 234 . - . ID=g7076.t1.exon9;Parent=g7076.t1 NODE_502_length_22222_cov_44.1894 . CDS 103 234 . - 1 ID=cds.g7076.t1;Parent=g7076.t1;3_prime_partial=true #PROT g7076.t1 g7076 MNNSNGGGMCDCGDKEAWAGDPFCDVHRPSDAADQSHDPVADISVDLRERAVSVFRTILEYVSDALSLPEKATASPEMWGADLLRGGMFVTIVYNDETHTFDDVIRKLAVAVGCTRKDAQRYAELIDKEGRAIVCLDSLARCERMHRDITAEINLVVDVKDASIVSHQSCALLLLSWLHSVSRASDALRAIIGREFVRSGFAPNRAEDRSLVELALLADASLWKTARARMHGMYMGCLIVDAAFKKDFSIAFSRNYRELQEEFMDDSHSSADSAIQMSVQVFTVPSLVRMLVSEHGLLVTIVDTLLTFFSDVLTGDGIIDCQSALMQNHRYFHILVDLRYILRHDNIDVQGSNFLAGMLRLMKMMQQMDEVVRQLNEHVEIESESWMGAFTLCLHVIPLFPLLVKAYPPTADGVRSAASKTLEALYSHPSMRNFVLEMTPNGRCIKYDVASEAVSLHIPLHRTIAGLMQDAHRFNLLLEDVLHLAETTDPVERLITLVEHPLRICTFMAQAKAGMWVRNGYAIQNQIYNYVGVTFRDQMFDRDLTLLQSAAALLGPDTFIATVLNRFALDGYFTDVPEEESDPELLRRDLVLAEEFLQLLITVVGERMRPGVGRVSFADIVRREIVHRLCLGPVAYSELAQAVGRPIAEDPSFEPTLRAIAIFKQPLGLDSGMYELRPEMLSEYDPFFYHYTRREREKAESARLDRLRKKSDMYQPVSVPPPLTTPFAGLAHVLHSHAVAGIVRCVLRRAVAAASSGADSAPATKVPPSDSLIHAAVHIAALALVAAPVDAADEAGRNAELRTRFILLCAEGGSDSVLALLSRLAEMPSASDVRPMVRWLVREAQASGLAEVHAALGGNVAEREECAETLRQKKAQEAVDRRNKVLAQFAAMQKSFMAKNSQLLADADRPDASSQTAPPSEVDDTQTAAALAARRASGEENVDGAGGPSSYSASFDMGSQTTASPIREVVTCILCQEEASVGDGGRRSAGLVALVQSSGVLRSLNKATDPLAGDASRTGQVNDRYLATPGVGSAASSPLARAESPLRVPLPMDLSGIPPSMHGSSRSATPTTPARPPSAAGGSGAVGGGVFATCLREVAADDYNARDDDTRKRQTLAEGGPPSDSLFRHANLCVGVHVSSCGHAMHFDCFDRYFRSLLEKHIVNPSRVRVARVDKNEFLCPMCKALGNAVLPLVPRGNSVPTPREQSSATEQAMHVEYSEGEFRASWIPAMARLSQDLADRERAVESQRQAKERAEQQQSTLVPDAARSAEDNSSAGPATGDRWPLLSRLRGLYSAARLGSSDARRSNRRTRDDADASDGDGVADMIECFFNRIHQTDVGGFVVEHEEGSAAPPTWNACAYTIASLEVSARGGEHGISLPDNVSERAVTCLRALVRAVGSAVDIGLVPAHARLLARCLEVFLNGEEHVGGRLSLLSADAFNMLVWLYFSLPASHSMRASLANFQHATRLAYLAHMLQGALCVALGPESSPELANLDAIYDDEYGTPTPAECDAAGDLVRRAADCIGVDCSASLEDPHLGVRRLRHYALPFLRRAALLMHASLETPIPRVDEQEHESLCEMLGLPASLSDARDDAMAALMGGESLLVKWCAAFRRTMSYAANDAADPEDRTGRARSLLPGFGGFGSMALVPLAHDFNDLFHEATSVRCLQCKTVPALPALCLTCGRYLCAQSGCCHGKAGGECRVHSLSCGAGTGLFLLVKRCVIVVLQGERGTFFGAPYLDAHGETDILLR # PASA_UPDATE: g7077.t1, single gene model update, valid-1, status:[pasa:asmbl_7816,status:3], valid-1 NODE_502_length_22222_cov_44.1894 . gene 7953 8895 . - . ID=g7077;Name=g7077.t1 NODE_502_length_22222_cov_44.1894 . mRNA 7953 8895 . - . ID=g7077.t1;Parent=g7077;Name=g7077.t1 NODE_502_length_22222_cov_44.1894 . five_prime_UTR 8840 8895 . - . ID=g7077.t1.utr5p1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . exon 8702 8895 . - . ID=g7077.t1.exon1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . CDS 8702 8839 . - 0 ID=cds.g7077.t1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . exon 8503 8589 . - . ID=g7077.t1.exon2;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . CDS 8503 8589 . - 0 ID=cds.g7077.t1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . exon 8342 8410 . - . ID=g7077.t1.exon3;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . CDS 8342 8410 . - 0 ID=cds.g7077.t1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . exon 8197 8208 . - . ID=g7077.t1.exon4;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . CDS 8197 8208 . - 0 ID=cds.g7077.t1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . exon 7953 8077 . - . ID=g7077.t1.exon5;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . CDS 7958 8077 . - 0 ID=cds.g7077.t1;Parent=g7077.t1 NODE_502_length_22222_cov_44.1894 . three_prime_UTR 7953 7957 . - . ID=g7077.t1.utr3p1;Parent=g7077.t1 #PROT g7077.t1 g7077 MIKFVLLVNKQGQTRLAQYYEYIPVQERVNTEAEIIRKCLARNENQCSFMEFKNMKVVYRRYASLFFIIGIDHGENELGILEFIHTLVETFDRYFDTVCELDIMFGIDKAHMILDEMIANGYIVEANKTNILTALALMESK* # ORIGINAL: g2907.t1 original gene structure, not modified by PASA NODE_4949_length_1123_cov_26.6288_potentialcontaminant AUGUSTUS gene 1 1123 . - . ID=g2907;Name=g2907.t1 NODE_4949_length_1123_cov_26.6288_potentialcontaminant AUGUSTUS mRNA 1 1123 . - . ID=g2907.t1;Parent=g2907;Name=g2907.t1 NODE_4949_length_1123_cov_26.6288_potentialcontaminant AUGUSTUS exon 1 1123 . - . ID=g2907.t1.exon1;Parent=g2907.t1 NODE_4949_length_1123_cov_26.6288_potentialcontaminant AUGUSTUS CDS 1 1123 . - 0 ID=cds.g2907.t1;Parent=g2907.t1 #PROT g2907.t1 g2907 VVVAGAAAGTGSAAFGYSGGYPGGAMGHFTFLVVAFSDASSSRLDPDPASSEAQSSSLIPLSISPSATVAGGVASSEVEAEAVSSAAPTVRSSGASAVPSSSFGGDVVEASATSAPAPGGVASSSEAETVSSAAPAVPSSGAAAAPSSSFGGEVVEASATSAPAHEGVASSSALAASSSKVEAEAVSSAAPAVPSSGAAAAPSSSFGGDVVEASATSAPAPGGVASSSASATSSFNVEAEAGSSAAPAAPSSGAAAAPSSSFGGNVVEASATSAPAPGGVASSSALTTSSSKVEAEAVSSAAPAAPPSGAAASPSSSFGGDVIEASATSAPPPGGVASSSKVEAEVVSSPAPAVPSSGAAAAPSSSLGGDVIEA # ORIGINAL: g8870.t1 original gene structure, not modified by PASA NODE_1553_length_10509_cov_40.3099 AUGUSTUS gene 9362 10395 . + . ID=g8870;Name=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS mRNA 9362 10395 . + . ID=g8870.t1;Parent=g8870;Name=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 9362 9522 . + . ID=g8870.t1.exon1;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 9362 9522 . + 0 ID=cds.g8870.t1;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 9703 9847 . + . ID=g8870.t1.exon2;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 9703 9847 . + 1 ID=cds.g8870.t1;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 10031 10142 . + . ID=g8870.t1.exon3;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 10031 10142 . + 0 ID=cds.g8870.t1;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 10307 10395 . + . ID=g8870.t1.exon4;Parent=g8870.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 10307 10395 . + 2 ID=cds.g8870.t1;Parent=g8870.t1 #PROT g8870.t1 g8870 MANVGGLQAAADERKARLLALRQQKRQADESAQQESAKRQRLDEDGDEIDEDERGENAPAIKFRNYTPISETLQENALPKPGIVSLDDAVKEDAKPTKQEEVDLINLQPRKPNWDLKRDVAKKLDVLGKKTTRAIAELIRERLKGEGDLATAVAATGAVDNDNNSDDD* # PASA_UPDATE: g8869.t1, single gene model update, valid-1, status:[pasa:asmbl_1946,status:12],[pasa:asmbl_1947,status:12],[pasa:asmbl_1948,status:12],[pasa:asmbl_1949,status:12], valid-1 NODE_1553_length_10509_cov_40.3099 . gene 1856 8004 . - . ID=g8869;Name=g8869.t1 NODE_1553_length_10509_cov_40.3099 . mRNA 1856 8004 . - . ID=g8869.t1;Parent=g8869;Name=g8869.t1 NODE_1553_length_10509_cov_40.3099 . exon 3981 8004 . - . ID=g8869.t1.exon1;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . CDS 3981 8004 . - 0 ID=cds.g8869.t1;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . exon 3474 3586 . - . ID=g8869.t1.exon2;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . CDS 3474 3586 . - 2 ID=cds.g8869.t1;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . exon 1856 3256 . - . ID=g8869.t1.exon3;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . CDS 1934 3256 . - 0 ID=cds.g8869.t1;Parent=g8869.t1 NODE_1553_length_10509_cov_40.3099 . three_prime_UTR 1856 1933 . - . ID=g8869.t1.utr3p1;Parent=g8869.t1 #PROT g8869.t1 g8869 MAPVPLDDARRLTKQLCDAVDAHAEDATISDLMHSIAGAQECDSSKLPTLMSDAAHGRTFFTALLRVASRFSPTATTGESAECARLSVRMANSLLSDCEGNATAVAEQCWHAIAGDDGGHVRHVAGEVLPRIIAYSADDAFRSDALRLLKVARTLAMPKSDAGALLGSLPGDGCIQLEGDWSDNTMSVCNPACVPCSRLRAHWEADFARFEAPPTVDLAVATVNDHNDIDSGSISIVTAAFVESVANACVEELRFGIDLPSFHTATADRNCRDDVVCDAPFDEASLLSANKRLAAVDPSLSMLRIHPRILMAQTPLLSWTSGHSDGLCVATGVALPRGEASLFEAIAKLLHGTHAAGGYLRRALVGKAVSHPDMFHRAVSTRGAAIEEDLASSGFSTPELISYGDSASDAESIENDGSEGSLVVVRGLTTVAAEDTARTVATLSGVCAAFARGVDSPPDASPAEMAVSSMLRGLADWRDISIVVIDCASREDTGMRRGRPECALFRPTHGPGHSALLVCHVGDGVFEAVVSAETERHVRRCWRIARLLPIEPAVASPRSASPGTPSLGTTSAVQLTMDYIAHGQRSSPTPPQIIALPPPSQNPLSHAPAALADSEMSSTSFDAVTGELATDSVADVTLSGLLGSAGGPALTDDDGVTCVLEEPHYNRTAQCTPDAPLSRRSLAFPHDSASTRRNAEVPLGHVVDPRTDVRGVRGRTGGRVVSIVAMIAIVAAATYVGVLVIDEPAGCEDVVWAVDAVDYLSAAYLDKAGTLDDKSGGAISGIGTDDAVYFLSKDPCTVVFEEESAATEMVSTVSHAEDAGCEREIPVGAFPSTAATVGTNSRPCDATSDIATPVLSLPQPEDAATPASSGMDAHDDYDTEIDTLHSKGASSDASIATAAQALAPPEIGDHADSTTAAGEDAVSMGGASDTNLNALANGGDSAVTDTPTPNDDTDDTDEDEFGDSEDYDGGDGNSNDYNWEDIMNEQLRCATRNAARWEAKVVELLGLFWRWKDATQRTEQRDRRSLSNSADGGRILWVSEEESNQLLAKVDQCVSGNNADDHDAVAILSDSTVGSKAVSVVGGATSALSALPVATAVSVVDGAINALSTLPVATKVFFVGGATSALSALPVATAVSVVGRATSALSVLPVATAVSVVGGSTSALSVLPVATDVSVIGTISALSVPPVATAVFVVGGATSALSVLPVATAVSVVGGAISTLSVLPGAMAVSVVDGATTALSALPGATDDASKVSESHDSRLPVVTPRLVVTDSNSNAMDGKVECDDPVVVCSMDESGDGTSSHDSTSTAAIDTPLLNATLIALLEDIVAKWRAPPADHVDGEVDRTPSVWDILHEAEPERKLDGRDVQFERDDSNVKAVEWQASLLFSDMPAVNEIRTRPTTQTVRVEGVVSLHPMEPECPSAVLYTPTQARVRTYEQKISFGLSGKCLEVMRRPSVELSVDTVTADTICGGELSQDNARAQESKSGHTSPNGVPSNGSTKDGDKDGNRNYWGPFESAYGNALHTLLEQMQQVKTKVTTFGTSVSAQWSRLLVRLQELLAQLFERVVGLIFSEESSRFSRLIGSSTHETGKVIRSATTAFSEMWNGALGGAAGHLSARLDSVMAFSKRSPTLSAFERMLSAGKERMAGHMWGAAEAIDGWAAAARDSEEKADDELRKIWTDIATLTKDARSRGLDDVWAEFVDPIERIWRASSSVTERWFSSIAKKVGDRGSSRRNSHPGTGDDSARVRTSENGLENGGVVNSVAMEAWCRQPSMEKTPSYEVSVAQTSASSFVLRVKAKRGTRIASMTVRWAAEVKCRP* # ORIGINAL: g8868.t1 original gene structure, not modified by PASA NODE_1553_length_10509_cov_40.3099 AUGUSTUS gene 334 1396 . + . ID=g8868;Name=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS mRNA 334 1396 . + . ID=g8868.t1;Parent=g8868;Name=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 334 513 . + . ID=g8868.t1.exon1;Parent=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 334 513 . + 2 ID=cds.g8868.t1;Parent=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 693 894 . + . ID=g8868.t1.exon2;Parent=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 693 894 . + 2 ID=cds.g8868.t1;Parent=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS exon 1183 1396 . + . ID=g8868.t1.exon3;Parent=g8868.t1 NODE_1553_length_10509_cov_40.3099 AUGUSTUS CDS 1183 1396 . + 1 ID=cds.g8868.t1;Parent=g8868.t1 #PROT g8868.t1 g8868 DIAFRILDALGEKSRLVRGDSSASTANNSTVAPRVIVCDINPSMLGVGKMRAKERGYTDESELSWVVGDAEHLPIRDASVDCYTIAFGIRNVTNVDAALREAHRVLVRGGRFMCLEFSHVTTPGVKEVYDAYSFNAIPSLGQMIAGDKESYQYLVESIRRFPDQKTFASMIRNAGFRFVQHENLTFGVAAIHSGIKL* # ORIGINAL: g2158.t1 original gene structure, not modified by PASA NODE_2443_length_6241_cov_43.3669_potentialcontaminant AUGUSTUS gene 1109 1555 . + . ID=g2158;Name=g2158.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant AUGUSTUS mRNA 1109 1555 . + . ID=g2158.t1;Parent=g2158;Name=g2158.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant AUGUSTUS exon 1109 1555 . + . ID=g2158.t1.exon1;Parent=g2158.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant AUGUSTUS CDS 1109 1555 . + 0 ID=cds.g2158.t1;Parent=g2158.t1 #PROT g2158.t1 g2158 MCPFALDWLTPASHRIGNVVVQRNFGVIEITGLGEGSALVHSSVRDVNGASLLKLTQHFKGPQLASSEVIYIDSDGKAVEGRGPAADGCLGDASRYRRFVGAVCRYAAMTSEQGVTSVVTTLVALFVTFEIASQGLRRMVTWMSSWSA* # PASA_UPDATE: g2159.t1, single gene model update, valid-1, status:[pasa:asmbl_4322,status:3], valid-1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . gene 2429 4368 . - . ID=g2159;Name=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . mRNA 2429 4368 . - . ID=g2159.t1;Parent=g2159;Name=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . five_prime_UTR 4299 4368 . - . ID=g2159.t1.utr5p1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . exon 4290 4368 . - . ID=g2159.t1.exon1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . CDS 4290 4298 . - 0 ID=cds.g2159.t1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . exon 3730 3878 . - . ID=g2159.t1.exon2;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . CDS 3730 3878 . - 0 ID=cds.g2159.t1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . exon 3282 3394 . - . ID=g2159.t1.exon3;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . CDS 3282 3394 . - 1 ID=cds.g2159.t1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . exon 2429 2768 . - . ID=g2159.t1.exon4;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . CDS 2521 2768 . - 2 ID=cds.g2159.t1;Parent=g2159.t1 NODE_2443_length_6241_cov_43.3669_potentialcontaminant . three_prime_UTR 2429 2520 . - . ID=g2159.t1.utr3p1;Parent=g2159.t1 #PROT g2159.t1 g2159 MSQPPLAPHLTPLAGLVGTWRGQGKGKYPTIKDFEYGEEVKIWHYGGPFLLYLQRTWSTAENKPLHSESGFVRFPKGRPGTVELVLAQPSGISSVEVGSIETLADGKVVISLSAEEKDITRTPTSTPPHVKRYARKWTVTPGTSFLYEFDMETDNTPMTRHLDATLIPATDA* # ORIGINAL: g2156.t1 original gene structure, not modified by PASA NODE_3544_length_3236_cov_33.488_potentialcontaminant AUGUSTUS gene 94 335 . + . ID=g2156;Name=g2156.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant AUGUSTUS mRNA 94 335 . + . ID=g2156.t1;Parent=g2156;Name=g2156.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant AUGUSTUS exon 94 335 . + . ID=g2156.t1.exon1;Parent=g2156.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant AUGUSTUS CDS 94 335 . + 2 ID=cds.g2156.t1;Parent=g2156.t1 #PROT g2156.t1 g2156 KDIIYYVDAGNPTSGPRVFNPTQAHVSNKEMLTKVATRFEDLVWVWGRGVAHMFKSWFDIYDDWSSVLTNLHNQASSDK* # PASA_UPDATE: g2157.t1, single gene model update, valid-1, status:[pasa:asmbl_6192,status:12], valid-1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . gene 847 1841 . + . ID=g2157;Name=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . mRNA 847 1841 . + . ID=g2157.t1;Parent=g2157;Name=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . exon 847 915 . + . ID=g2157.t1.exon1;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . CDS 847 915 . + 0 ID=cds.g2157.t1;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . exon 1124 1273 . + . ID=g2157.t1.exon2;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . CDS 1124 1273 . + 0 ID=cds.g2157.t1;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . exon 1423 1841 . + . ID=g2157.t1.exon3;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . CDS 1423 1701 . + 0 ID=cds.g2157.t1;Parent=g2157.t1 NODE_3544_length_3236_cov_33.488_potentialcontaminant . three_prime_UTR 1702 1841 . + . ID=g2157.t1.utr3p1;Parent=g2157.t1 #PROT g2157.t1 g2157 MYQSCGSFNMPDMLTVGMGGMTQGQYRAQMFLWAALGAPLIVGCDVRKMDNFTVDLLTAPEVLQANQDPLCVQASMAQATGATELWIKPLSDGSYVCVLLNKADSPQNVTVHIDTKYNWGDFYPAQFDSAHVRDIFAGKDLGVYSDVFTALVDPMDAMIVKITPL* # ORIGINAL: g7115.t1 original gene structure, not modified by PASA NODE_2322_length_6732_cov_40.151 AUGUSTUS gene 803 2143 . - . ID=g7115;Name=g7115.t1 NODE_2322_length_6732_cov_40.151 AUGUSTUS mRNA 803 2143 . - . ID=g7115.t1;Parent=g7115;Name=g7115.t1 NODE_2322_length_6732_cov_40.151 AUGUSTUS exon 803 2143 . - . ID=g7115.t1.exon1;Parent=g7115.t1 NODE_2322_length_6732_cov_40.151 AUGUSTUS CDS 803 2143 . - 0 ID=cds.g7115.t1;Parent=g7115.t1 #PROT g7115.t1 g7115 MQRPTVLEDVSIVRSERTTVSVNTRDGRQSIRSQLESSVVAVDGSSSARRFFSFGKGVGMSTGLREFYVKQNELIKACKTDALSDPHHGHGSPRNSTDAVLPVEDVAVPDQRDEEDGGDSSALIGRTSDSAAAETDNDNKKWRASILQINAIDLATRASLICNIALFALKVGASVTSGSLAVMTSLADSFVDLATSVILWLTTRAVKKNDYYRYPQGNARLEPIAVLSLTCVMITVCAQFAIEGVKQIIGNTGLAEPLGMFAMAVMIATIVVKMVLYFLCKRAGNISTEALALDHFNDVIANAVALICGELSFYYWRGIDPLGAILMNLYVIYKWVVLAREVMQMMIGKSADPQLLQRLTWIAYDAHPDIMFIDTVRAYHFGSKVLVECDIVMEGSTPLHIAHDIGELLQKKLEMVEEVERAFVHIDFEVEHDPKSEHKRPIADAH* # PASA_UPDATE: g7117.t1, single gene model update, valid-1, status:[pasa:asmbl_4037,status:12], valid-1 NODE_2322_length_6732_cov_40.151 . gene 4947 6533 . - . ID=g7117;Name=g7117.t1 NODE_2322_length_6732_cov_40.151 . mRNA 4947 6533 . - . ID=g7117.t1;Parent=g7117;Name=g7117.t1 NODE_2322_length_6732_cov_40.151 . exon 6456 6533 . - . ID=g7117.t1.exon1;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . CDS 6456 6533 . - 0 ID=cds.g7117.t1;Parent=g7117.t1;5_prime_partial=true NODE_2322_length_6732_cov_40.151 . exon 6174 6283 . - . ID=g7117.t1.exon2;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . CDS 6174 6283 . - 0 ID=cds.g7117.t1;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . exon 5801 6011 . - . ID=g7117.t1.exon3;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . CDS 5801 6011 . - 1 ID=cds.g7117.t1;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . exon 5376 5490 . - . ID=g7117.t1.exon4;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . CDS 5376 5490 . - 0 ID=cds.g7117.t1;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . exon 4947 5219 . - . ID=g7117.t1.exon5;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . CDS 5128 5219 . - 2 ID=cds.g7117.t1;Parent=g7117.t1 NODE_2322_length_6732_cov_40.151 . three_prime_UTR 4947 5127 . - . ID=g7117.t1.utr3p1;Parent=g7117.t1 #PROT g7117.t1 g7117 SALGWDHVEQSSQQKTAAPVQVDSGKASSIKSRFENMNNNEEEEQRKKIEAEREKKRIVESQKQAEAKQKQQEQEKKEREEKERARRDAEERARRQAEDQAAAAAAAAAAEAEQAEPEPEPAAEPEPEPEAAEYQEEAAPAAGGGFSARALYDYQANGEDEVTFDPEDIITDCEVVDEGWWQGQVRGKFGLFPSNYVERID* # PASA_UPDATE: g7116.t1, single gene model update, valid-1, status:[pasa:asmbl_4038,status:12], valid-1 NODE_2322_length_6732_cov_40.151 . gene 3268 4963 . + . ID=g7116;Name=g7116.t1 NODE_2322_length_6732_cov_40.151 . mRNA 3268 4963 . + . ID=g7116.t1;Parent=g7116;Name=g7116.t1 NODE_2322_length_6732_cov_40.151 . five_prime_UTR 3268 3355 . + . ID=g7116.t1.utr5p1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . exon 3268 3403 . + . ID=g7116.t1.exon1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . CDS 3356 3403 . + 0 ID=cds.g7116.t1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . exon 3530 3705 . + . ID=g7116.t1.exon2;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . CDS 3530 3705 . + 0 ID=cds.g7116.t1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . exon 3799 3897 . + . ID=g7116.t1.exon3;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . CDS 3799 3897 . + 1 ID=cds.g7116.t1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . exon 4037 4140 . + . ID=g7116.t1.exon4;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . CDS 4037 4140 . + 1 ID=cds.g7116.t1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . exon 4649 4963 . + . ID=g7116.t1.exon5;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . CDS 4649 4800 . + 2 ID=cds.g7116.t1;Parent=g7116.t1 NODE_2322_length_6732_cov_40.151 . three_prime_UTR 4801 4963 . + . ID=g7116.t1.utr3p1;Parent=g7116.t1 #PROT g7116.t1 g7116 MSTQYKPKILVAGPSQAGKTVTSNFIADLNDAFVGDYKPTQGVRILEFDKELPSSGRQRTLTAQVELWDVSGDPKFEACYPAIAKDVIGVVLMFDPDDRGQAAALENWHSRFVYQMGLKDNQCIIFAHRSSQSAAQQNKVKLSKNLQKVPVFQTNIETTGELIKNEFTNLLINVHGIWSENRDKEELSVMNT* # ORIGINAL: g6960.t1 original gene structure, not modified by PASA NODE_4214_length_2015_cov_29.8469 AUGUSTUS gene 255 1617 . - . ID=g6960;Name=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS mRNA 255 1617 . - . ID=g6960.t1;Parent=g6960;Name=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS exon 1556 1617 . - . ID=g6960.t1.exon1;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS CDS 1556 1617 . - 0 ID=cds.g6960.t1;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS exon 1349 1426 . - . ID=g6960.t1.exon2;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS CDS 1349 1426 . - 1 ID=cds.g6960.t1;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS exon 755 914 . - . ID=g6960.t1.exon3;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS CDS 755 914 . - 1 ID=cds.g6960.t1;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS exon 255 398 . - . ID=g6960.t1.exon4;Parent=g6960.t1 NODE_4214_length_2015_cov_29.8469 AUGUSTUS CDS 255 398 . - 0 ID=cds.g6960.t1;Parent=g6960.t1 #PROT g6960.t1 g6960 MRVMISDTTKKFFVFSNEHHRDTYVERDEGESPNDRNDRAIRTAAAWYNRHVNDKTDDVRCHVILLTDDRDNRRKAREHFDILAMSVADYARGHTATPELVDLLAMGGGAAAWDDPQWHSDIACVEHLPLSTIQAGIRNGRYYQGTLQ # ORIGINAL: g7734.t1 original gene structure, not modified by PASA NODE_4185_length_2060_cov_35.7829 AUGUSTUS gene 146 1966 . - . ID=g7734;Name=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS mRNA 146 1966 . - . ID=g7734.t1;Parent=g7734;Name=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS exon 1821 1966 . - . ID=g7734.t1.exon1;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS CDS 1821 1966 . - 0 ID=cds.g7734.t1;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS exon 1581 1695 . - . ID=g7734.t1.exon2;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS CDS 1581 1695 . - 1 ID=cds.g7734.t1;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS exon 1191 1356 . - . ID=g7734.t1.exon3;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS CDS 1191 1356 . - 0 ID=cds.g7734.t1;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS exon 1001 1060 . - . ID=g7734.t1.exon4;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS CDS 1001 1060 . - 2 ID=cds.g7734.t1;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS exon 146 784 . - . ID=g7734.t1.exon5;Parent=g7734.t1 NODE_4185_length_2060_cov_35.7829 AUGUSTUS CDS 146 784 . - 2 ID=cds.g7734.t1;Parent=g7734.t1 #PROT g7734.t1 g7734 MPAKEFASKLGLETGWNCHISLGTAPPPKPSPLVAPLTPHPHNSPTYESNKSRLPRGISSIRTHLREVDDVPLLVPLFTECTPQVTEEMMLIMQENGEVVACAASALRPANCAAFARADLPIAIRPMQPTACLLGKQRNFEAGTPTLVKDENGRPTLQLTSNDGARPPRVSALDLAAHLTSIPCSLELSHDADYAVVKDLVREARRLSDNAAMSMAFVLGCHVCLYLVLLIDYIVLLPPILNAIHLLWTTWVIVPILGLSILASPAEPGILRAMTGKNKDILKFARRYTVYLFVRFLPSAGIAVGVFALTLRHFCDGRIAAYLANTYGIASNCHGLYGERNGPFASAVWNGWTTAYGQGFSLAQNLALWVLVLYF # ORIGINAL: g3123.t1 original gene structure, not modified by PASA NODE_9047_length_346_cov_51.4871_potentialcontaminant AUGUSTUS gene 2 346 . + . ID=g3123;Name=g3123.t1 NODE_9047_length_346_cov_51.4871_potentialcontaminant AUGUSTUS mRNA 2 346 . + . ID=g3123.t1;Parent=g3123;Name=g3123.t1 NODE_9047_length_346_cov_51.4871_potentialcontaminant AUGUSTUS exon 2 346 . + . ID=g3123.t1.exon1;Parent=g3123.t1 NODE_9047_length_346_cov_51.4871_potentialcontaminant AUGUSTUS CDS 2 346 . + 0 ID=cds.g3123.t1;Parent=g3123.t1 #PROT g3123.t1 g3123 GWSTYSWDWAYFKSTDFASANPLWVAEFANFVQAVATTSTVDENDSIFSTIEHVRVLCPEIALNFVGGKRVSTALYNSLQAQRDRICCVLYVACQLDFLATSWRFATTFNDLAVD # PASA_UPDATE: g12413.t1, single gene model update, valid-1, status:[pasa:asmbl_6983,status:12], valid-1 NODE_4116_length_2172_cov_39.7706 . gene 182 1047 . + . ID=g12413;Name=g12413.t1 NODE_4116_length_2172_cov_39.7706 . mRNA 182 1047 . + . ID=g12413.t1;Parent=g12413;Name=g12413.t1 NODE_4116_length_2172_cov_39.7706 . five_prime_UTR 182 240 . + . ID=g12413.t1.utr5p1;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . exon 182 297 . + . ID=g12413.t1.exon1;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . CDS 241 297 . + 0 ID=cds.g12413.t1;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . exon 461 622 . + . ID=g12413.t1.exon2;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . CDS 461 622 . + 0 ID=cds.g12413.t1;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . exon 808 1047 . + . ID=g12413.t1.exon3;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . CDS 808 876 . + 0 ID=cds.g12413.t1;Parent=g12413.t1 NODE_4116_length_2172_cov_39.7706 . three_prime_UTR 877 1047 . + . ID=g12413.t1.utr3p1;Parent=g12413.t1 #PROT g12413.t1 g12413 MSFASGVVIFSSEVAGSQVVRKQTTAINQILTGHKIAVQNVDVSIDADGKKYMQEKSGKTTLPQIFSNGEYKGGHDELVDINEDGPAAVKQFLGI* # PASA_UPDATE: g1397.t1, single gene model update, valid-1, status:[pasa:asmbl_7511,status:12], valid-1 NODE_4666_length_1354_cov_30.7717 . gene 202 1165 . - . ID=g1397;Name=g1397.t1 NODE_4666_length_1354_cov_30.7717 . mRNA 202 1165 . - . ID=g1397.t1;Parent=g1397;Name=g1397.t1 NODE_4666_length_1354_cov_30.7717 . exon 1078 1165 . - . ID=g1397.t1.exon1;Parent=g1397.t1 NODE_4666_length_1354_cov_30.7717 . CDS 1078 1165 . - 0 ID=cds.g1397.t1;Parent=g1397.t1 NODE_4666_length_1354_cov_30.7717 . exon 544 615 . - . ID=g1397.t1.exon2;Parent=g1397.t1 NODE_4666_length_1354_cov_30.7717 . CDS 544 615 . - 2 ID=cds.g1397.t1;Parent=g1397.t1 NODE_4666_length_1354_cov_30.7717 . exon 202 338 . - . ID=g1397.t1.exon3;Parent=g1397.t1 NODE_4666_length_1354_cov_30.7717 . CDS 202 338 . - 2 ID=cds.g1397.t1;Parent=g1397.t1;3_prime_partial=true #PROT g1397.t1 g1397 MVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTICVRNTEITFSIWDLGGQREFINMLPLVCNDALAILFMFDLSRKSTLNSVKEWYRQARGFNK # ORIGINAL: g9125.t1 original gene structure, not modified by PASA NODE_1810_length_9129_cov_43.2495 AUGUSTUS gene 510 2603 . - . ID=g9125;Name=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS mRNA 510 2603 . - . ID=g9125.t1;Parent=g9125;Name=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 2227 2603 . - . ID=g9125.t1.exon1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 2227 2603 . - 0 ID=cds.g9125.t1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 1974 2135 . - . ID=g9125.t1.exon2;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 1974 2135 . - 1 ID=cds.g9125.t1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 1722 1841 . - . ID=g9125.t1.exon3;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 1722 1841 . - 1 ID=cds.g9125.t1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 1420 1574 . - . ID=g9125.t1.exon4;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 1420 1574 . - 1 ID=cds.g9125.t1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 935 1300 . - . ID=g9125.t1.exon5;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 935 1300 . - 2 ID=cds.g9125.t1;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 510 829 . - . ID=g9125.t1.exon6;Parent=g9125.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 510 829 . - 2 ID=cds.g9125.t1;Parent=g9125.t1 #PROT g9125.t1 g9125 MLRQTLTGASPSGVAVLRMHNAGTAACASWWAPGAAHVTRAVERDVRLPRASERTCATFNGRACRTGPPLGSASVSLRPRSTSSAASARSSSPSLWAGFFGSPREPTVDVDVSPSPPTTGPCLFAWGTSNDGQLGRADSTRHVAPVGFAWAGPLATHVVSDISCGVAHATAVIDGQLYCWGSNFFGQVGSGGSTSFFDDEADEVTTAVPQAALAQERFVSCRSGYFHNVALSTDGTVHSWGSGLLGRGDEANDSFPAAVDGLPAAATGVRAGATMSAVLTASGIVYAWGWMPLSPGSRAAKVLRPLPVPAVEGASHIAIGSHHVAAVLEGDPLCVVVLGDDRVPVDRPYHPYYCEDTPEHPGDVVHFKAVRHVRVPSKVVQLVAGGGFTVALLEDGEVHAFGLNSAGQVPGVAHGTHVTGASVVLLPTSAVSVACGLRHATAVLSDGRVVEWGAGTASVMGGERMSSARAPTFDVPLGTVRGGWRPSQCAAGCDFTIVA* # ORIGINAL: g9128.t1 original gene structure, not modified by PASA NODE_1810_length_9129_cov_43.2495 AUGUSTUS gene 5691 6866 . + . ID=g9128;Name=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS mRNA 5691 6866 . + . ID=g9128.t1;Parent=g9128;Name=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 5691 5906 . + . ID=g9128.t1.exon1;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 5691 5906 . + 0 ID=cds.g9128.t1;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 6047 6131 . + . ID=g9128.t1.exon2;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 6047 6131 . + 0 ID=cds.g9128.t1;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 6253 6362 . + . ID=g9128.t1.exon3;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 6253 6362 . + 2 ID=cds.g9128.t1;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 6483 6536 . + . ID=g9128.t1.exon4;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 6483 6536 . + 0 ID=cds.g9128.t1;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 6714 6866 . + . ID=g9128.t1.exon5;Parent=g9128.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 6714 6866 . + 0 ID=cds.g9128.t1;Parent=g9128.t1 #PROT g9128.t1 g9128 MGERGGLQYGTTTPISVSGPTAGDIELTNELERTLRSHDLFESDEEASHRQIVLGKLHGIVRDWIKKVSIENHRMSEVMASQVGGKIYTFGSYRLGVHGKGADIDTLCVAPRLVTRADFFKILKEMLEAREEVTELTAVEAAFVPVIKMEFSGIEIDLLFARLSLSSIPDDLDLMDASILRSVDDEDEATVRSLNGALDTLALAL* # PASA_UPDATE: g9126.t1, single gene model update, valid-1, status:[pasa:asmbl_2684,status:12], valid-1 NODE_1810_length_9129_cov_43.2495 . gene 2837 4565 . + . ID=g9126;Name=g9126.t1 NODE_1810_length_9129_cov_43.2495 . mRNA 2837 4565 . + . ID=g9126.t1;Parent=g9126;Name=g9126.t1 NODE_1810_length_9129_cov_43.2495 . five_prime_UTR 2837 2872 . + . ID=g9126.t1.utr5p1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . exon 2837 2956 . + . ID=g9126.t1.exon1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . CDS 2873 2956 . + 0 ID=cds.g9126.t1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . exon 3051 3141 . + . ID=g9126.t1.exon2;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . CDS 3051 3141 . + 0 ID=cds.g9126.t1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . exon 3248 3660 . + . ID=g9126.t1.exon3;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . CDS 3248 3660 . + 2 ID=cds.g9126.t1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . exon 3856 4065 . + . ID=g9126.t1.exon4;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . CDS 3856 4065 . + 0 ID=cds.g9126.t1;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . exon 4152 4565 . + . ID=g9126.t1.exon5;Parent=g9126.t1 NODE_1810_length_9129_cov_43.2495 . CDS 4152 4565 . + 0 ID=cds.g9126.t1;Parent=g9126.t1 #PROT g9126.t1 g9126 MPELPEVEHMRRVVAEACVGHKITSATADADDIVFDITKPAVFAASLVGRRVTGVDRYGKQLWVVFDDGPCANFQPGMTGNFVISGRDVSGYAKLRLKSSSVASDDGSAWPPRFARLWFTMDDGTRVAFVDARRLARVRPLDDPAVLRARLGFDPVHCMPTLEVFRMGLAARGMPIKALLLDQEFSAGVGNWVADEVLFQAGVHPEVRAKELSDAQSAVLHEKLKYVCETAVGLDGECDKYPATWLFHVRWGKGKKNKPITADGHKVEFLTVGGRTSAYVPSLQRKTEGKASDGEGRGAASETVKKQKGRSVKTPLPEDKKEGVPKRMEVAHSEDVARIASGIGKQIHKPLKRRGNVRDDSAPVDAPEQGPPAKRQRVQVQTTVRPETGRETRRSAHVQNAST* # PASA_UPDATE: g9124.t1, single gene model update, valid-1, status:[pasa:asmbl_2683,status:12], valid-1 NODE_1810_length_9129_cov_43.2495 . gene 45 471 . + . ID=g9124;Name=g9124.t1 NODE_1810_length_9129_cov_43.2495 . mRNA 45 471 . + . ID=g9124.t1;Parent=g9124;Name=g9124.t1 NODE_1810_length_9129_cov_43.2495 . five_prime_UTR 45 45 . + . ID=g9124.t1.utr5p1;Parent=g9124.t1 NODE_1810_length_9129_cov_43.2495 . exon 45 153 . + . ID=g9124.t1.exon1;Parent=g9124.t1 NODE_1810_length_9129_cov_43.2495 . CDS 46 153 . + 0 ID=cds.g9124.t1;Parent=g9124.t1;5_prime_partial=true NODE_1810_length_9129_cov_43.2495 . exon 326 471 . + . ID=g9124.t1.exon2;Parent=g9124.t1 NODE_1810_length_9129_cov_43.2495 . CDS 326 379 . + 0 ID=cds.g9124.t1;Parent=g9124.t1 NODE_1810_length_9129_cov_43.2495 . three_prime_UTR 380 471 . + . ID=g9124.t1.utr3p1;Parent=g9124.t1 #PROT g9124.t1 g9124 PRPSQSAPPSPSPSAGLRPRSEVEIRQRFMHRLGIQEPEDYRTHALAYPHVLK* # PASA_UPDATE: g9127.t1, single gene model update, valid-1, status:[pasa:asmbl_2682,status:12], valid-1 NODE_1810_length_9129_cov_43.2495 . gene 4098 5251 . - . ID=g9127;Name=g9127.t1 NODE_1810_length_9129_cov_43.2495 . mRNA 4098 5251 . - . ID=g9127.t1;Parent=g9127;Name=g9127.t1 NODE_1810_length_9129_cov_43.2495 . five_prime_UTR 5238 5251 . - . ID=g9127.t1.utr5p1;Parent=g9127.t1 NODE_1810_length_9129_cov_43.2495 . exon 5021 5251 . - . ID=g9127.t1.exon1;Parent=g9127.t1 NODE_1810_length_9129_cov_43.2495 . CDS 5021 5237 . - 0 ID=cds.g9127.t1;Parent=g9127.t1 NODE_1810_length_9129_cov_43.2495 . exon 4098 4923 . - . ID=g9127.t1.exon2;Parent=g9127.t1 NODE_1810_length_9129_cov_43.2495 . CDS 4574 4923 . - 2 ID=cds.g9127.t1;Parent=g9127.t1 NODE_1810_length_9129_cov_43.2495 . three_prime_UTR 4098 4573 . - . ID=g9127.t1.utr3p1;Parent=g9127.t1 #PROT g9127.t1 g9127 MSLCFPATVPIVGYTRVETFLEGYWASSLQPESDGYHGAYPFPVANAQPWAGQAEFAVALAATETAMLAGAFGCSAECNSIPVIDANVYSYGASSRCRICNIDTGCEEFCLVFAQPLCPRLLPDHCGAGQDAAASVAAVTWPRGFRHYIDTHNVAPSLLFFKVITSMAGLPKEGFLNQVLRALGARGK* # ORIGINAL: g9129.t1 original gene structure, not modified by PASA NODE_1810_length_9129_cov_43.2495 AUGUSTUS gene 6948 9075 . + . ID=g9129;Name=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS mRNA 6948 9075 . + . ID=g9129.t1;Parent=g9129;Name=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 6948 7056 . + . ID=g9129.t1.exon1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 6948 7056 . + 0 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 7144 7282 . + . ID=g9129.t1.exon2;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 7144 7282 . + 2 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 7381 7453 . + . ID=g9129.t1.exon3;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 7381 7453 . + 1 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 7585 7729 . + . ID=g9129.t1.exon4;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 7585 7729 . + 0 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 7836 7974 . + . ID=g9129.t1.exon5;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 7836 7974 . + 2 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 8094 8284 . + . ID=g9129.t1.exon6;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 8094 8284 . + 1 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 8379 8509 . + . ID=g9129.t1.exon7;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 8379 8509 . + 2 ID=cds.g9129.t1;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS exon 8740 9075 . + . ID=g9129.t1.exon8;Parent=g9129.t1 NODE_1810_length_9129_cov_43.2495 AUGUSTUS CDS 8740 9075 . + 0 ID=cds.g9129.t1;Parent=g9129.t1 #PROT g9129.t1 g9129 MGLSLAGCRVTDQILRLVPNIETFRMALRAIKLWAKVRGVYSNAMGYLGGVAWAMLVARTCQLYPNAAASTIVTRFFRVFQQWKWPAPVILRHAEDLNFGMQVWNPQNELDNFLQANPGDRRHLMPIITPAYPQMNSTHNVSESTKRVMLEEFQRGIDITNAIESKKETWDALFKKSAFFTHYKNYIQVAAISTSEDDHRKWLGLIESKLRLFVSRLEFIQDLQSVHPYPRSYNQHSVPVDPSAGELPTYCTMFFIGLTFKPPKDERGEKVVRSIDVSPAVSDFKNIVHSWPGLVSASMKIEINHVKRCVQDDQEEDANAGAAKRRKISFEEEGLVHHAEIEDYGDPHKESVIPMESDAVQGETAAKTENVETLGEPVTEVPVAGIDIDVVQIQANDAASATTPEVPQTQGTTTCVRIIC* # ORIGINAL: g402.t1 original gene structure, not modified by PASA NODE_1626_length_10140_cov_90.5488 AUGUSTUS gene 166 10140 . + . ID=g402;Name=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS mRNA 166 10140 . + . ID=g402.t1;Parent=g402;Name=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS exon 166 268 . + . ID=g402.t1.exon1;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS CDS 166 268 . + 2 ID=cds.g402.t1;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS exon 607 679 . + . ID=g402.t1.exon2;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS CDS 607 679 . + 1 ID=cds.g402.t1;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS exon 891 1046 . + . ID=g402.t1.exon3;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS CDS 891 1046 . + 0 ID=cds.g402.t1;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS exon 1516 4571 . + . ID=g402.t1.exon4;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS CDS 1516 4571 . + 0 ID=cds.g402.t1;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS exon 4962 10140 . + . ID=g402.t1.exon5;Parent=g402.t1 NODE_1626_length_10140_cov_90.5488 AUGUSTUS CDS 4962 10140 . + 1 ID=cds.g402.t1;Parent=g402.t1 #PROT g402.t1 g402 GPRSNRDLCKALLQWTKDTCDDEDVTVTSSLVECFCHELTLPFLSASYCTADGWGSSQRNMHPLRLALIKLASAFGMAALVSVDDVSQRAVSMEAAAIYLAILRRKLKLQPLTSTSPLDNEALHPDAGWTLTLPAGLPVMPTVRPHSAPAGGRYRQDTEEIELSFLRGGGIPRSDSVTSNSSALGASAPSGLLLSVGHSGSRPRPMDSFRKAGHKASILSRFFSVHRASSPSANKDGAGVGVGSSHAMEASFPSSSKNNTLKASKKKKDALSESAQSNSSGATVIHNSANLNASQGSGSGLVPPSPHPHQIHHDSIASPRLSVPQPTAITREISPSGRVMRSYPSLRNLSMQRCGSWARFDVVEGASAPVESDAMSVDYLATDQGNEEFSAEGSMYSLTSSSFSGSGTQSYVSGTGTVRSLRHAASTLTCVNEHADGVSSGAGVGEREGSIGSAEDDTILSVAERMAHNAEYGSQGRLPARARSRVGGDGDAASVVSGDAATGLRVARAGSRRSNRSNLSRSFVGGVSPAASSLQLSGVLRRRQSMPTRQQSLWYEADRVESRENKRMSAVEQIRFNRPDALRSRVAATDAEGDQDATKPVSILYGPYATFYTAEVSTDAYGDYDSKVNRLIAVTGPDAELQVETDGRRTLRSMIHKATSEQKMSEVGLDSAPVTELRVPQQNIPEVPRSHSGDSFVLTVTAPPDEHAHASTSMEVGEASDVVTPPVEGDAVDVVEGGIALLNEPPEQAEMSTQTSPSDFQPSTDTVESAQKKEEEEEALRQLEATKGALAPVEAVVAAPVKCDAGVGCDEEDLDAAFSANAPGDVLAASVQPVHVEHARRRGTVEAAYRVDVAGSRLPAPETADAMVEELQEDVYVPVREKSTDEDADFLALANRGVEEGAPRTYDDLEASHARLQLAYVDQVAETMRLSLNQIDSHAPIHDNRLEIFTATLASSPLLMRRPEKAGVDVASEAVILQAVHGPKMVLTRGRSTANVHATAGLANGMSRSSSTVSIEKAEFVRAPVLSMMRAGSVRLAPDEELLPSTYSEAAASSSQEEERVHRDALEEESKLAELSSSKGGVVDVVADAEDEQVSRQGVTVDYLALPSTATTLLSKANSVQQHAEGYESGALHAFSAGEGTRDDAFPNIDSHMSPSQLSHPNLAVVTERGRESNRGGPLSPTFAADPKEENSPSLHAAVSLDPDTIAIVSFSDTVHSSRPTTPQKSHSPRELSQRSGVGAEETLPLDVSSASADDSDVPHVSPSETASQTRRRRPSVKRHSRQRDEDDLPLVYSPDVHVLPEAPTPEGLFTNSADASEFLASEVPSEDTPDARSENTIGGDPPAVYAMDGQSEAVDFAPAVTDIAQMTAMPQMTMTPLVTPALGRNEVVVASLPPSSLLEEFSMHGEVMEVSTPVVSVVSATPSARRMSVKRRTHDVQALLDMAAPQNLALARPISIDNVTLGVAFEPTSKPVLQRHIPQAVVLRSREGVSEAVVEELQLHEGNIAEEESLFDASPVAASAAPRPRRMSVKRHQHDVEAMRLGDHNTVGLIEPTDTRPPLQRVLGPNVVLKSRGDGSDPPDVSVVSPIYAEDVDEALVESSSVVSGQRPRRLSVKRRHHDLEAMSTAGAGVNAGDMLPVVPLLSVEEDVRVTPQLQRTIARSVVSRSRASDNGSPLVADESSVELEAEYASTLEFKSDVAIAPRPRRMSVKRHQHDIEALSADNVGRLPQPIFAVDNEVDSVAVDSEVDSAPRPPLLKSLSPAVAFKDTRESSQALPEEQTHVSLETTSVGAESVPLITAPVSRARRMSVKRHNHDLESVKEVSGGPPANLPLLAVAVENSAAVDDTSRRPPLQRVIKPLVATKASDAVQVAQVEHAAVYDDVRHLTAPAASSEVRVPASRARCMSVKRHHHDLESANSANSILARISLVPSIVPSEKVAKDTDVSLLSTSGALADALCMSDNSRGATDVDGAYTIDSSDGVEDVKDCDARADATGTESADAAVGGDGAWLPLSYREDGSVFVRGAVSTVGALDAMNSSKSPVGPGGNASGGEGASGVNGRFDRLVYTDDSHEMSRKRFDDVELNSGESDVTVEPVGVDAPGDGGDSAVNNVTAATELDAGTLAAEFETGIAADEYAHEVDDSATANTAINAADAEVDVNENDDGLDNVAPDEFSHIPPVELGDDDTLVLSTVAPVEHVFEDEVDEDASTIPYVVSMEMQTETSTPTTTTTEATTLNATPTPSESRSAPTPTPYAGPAWQAIASVSTPLATAYYNPFLAHAEPVLVESVVFPGDVDSHDDIGIPEDACGDASVLFSSSYVAMDDVNLTQGFPQYPAEWVLTATPSPTAGHSSVTAVPPPIPGWNPFLVNKDDASAVTENVGNDGQSKPVVDEEEISSFTTPSVREGVVTEPADIGADYSAHVREGVVTEPADIGADYSAHVREGVVTEPADIGADYSAHVRERVVTEPADISADYSAHVGEMHLHGDVGASVASGEAMDDMGGSCASGPTAVAASVTAAPLVIVSTVDDGTDDGLQSTGLDSCDDRTPTTNGSLSETPSTAAGVSAVQGNDADGGVSDVTPTYTPEDAVGDAPLTATDTQSASVKPAMHIVPTVTVTPSEATVIPEIVVSPAADDDLALPASAGNDVPHSMESNVDVVDDCEAHVKGPIHQTTGVDTSVDADVQDQDESSNIVTAEAASPVAPDAAVPRDRLRRTVVFSENVVLMFRHGETEPLKGEPDPLGSSDDDWDDDVDDDDGNDVDEYEDDFEADVTDEKTHGLVRDGELSHAVPRDASESDDAFVSIPLDNTVASDNGAEVGRITGFPEEREEFSDATDTARDGSAAVDVVTPLHDGSD # PASA_UPDATE: g9465.t1, single gene model update, valid-1, status:[pasa:asmbl_7893,status:12], valid-1 NODE_513_length_21997_cov_42.0962 . gene 18019 18655 . + . ID=g9465;Name=g9465.t1 NODE_513_length_21997_cov_42.0962 . mRNA 18019 18655 . + . ID=g9465.t1;Parent=g9465;Name=g9465.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 18019 18162 . + . ID=g9465.t1.utr5p1;Parent=g9465.t1 NODE_513_length_21997_cov_42.0962 . exon 18019 18372 . + . ID=g9465.t1.exon1;Parent=g9465.t1 NODE_513_length_21997_cov_42.0962 . CDS 18163 18372 . + 0 ID=cds.g9465.t1;Parent=g9465.t1 NODE_513_length_21997_cov_42.0962 . exon 18563 18655 . + . ID=g9465.t1.exon2;Parent=g9465.t1 NODE_513_length_21997_cov_42.0962 . CDS 18563 18571 . + 0 ID=cds.g9465.t1;Parent=g9465.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 18572 18655 . + . ID=g9465.t1.utr3p1;Parent=g9465.t1 #PROT g9465.t1 g9465 MPLPPPRRLTALDYGHRAIAGMLIAATSYYTVVLVHNAYTYRDRRRERLREKMAGDVNAEFLRLGETKEDER* # PASA_UPDATE: g9463.t1, single gene model update, valid-1, status:[pasa:asmbl_7892,status:3], valid-1 NODE_513_length_21997_cov_42.0962 . gene 14932 16307 . + . ID=g9463;Name=g9463.t1 NODE_513_length_21997_cov_42.0962 . mRNA 14932 16307 . + . ID=g9463.t1;Parent=g9463;Name=g9463.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 14932 15027 . + . ID=g9463.t1.utr5p1;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . exon 14932 15413 . + . ID=g9463.t1.exon1;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . CDS 15028 15413 . + 0 ID=cds.g9463.t1;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . exon 15569 15758 . + . ID=g9463.t1.exon2;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . CDS 15569 15758 . + 1 ID=cds.g9463.t1;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . exon 15938 16307 . + . ID=g9463.t1.exon3;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . CDS 15938 16243 . + 0 ID=cds.g9463.t1;Parent=g9463.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 16244 16307 . + . ID=g9463.t1.utr3p1;Parent=g9463.t1 #PROT g9463.t1 g9463 MSYQRLVDDDGLSSAAASSPARPAPAPQSSTAGRLPADFLSLDSVPQQQQQQQQHGMQVQQGPPQMMGMVPREGLLDVTVQRAELVKNYGLTKMDPYVEMWMSRSPVASRTMTIPNGGTHPVWNQTLHLAVYPTDTTLHVRIIDECIVTDSHIASVDIDISDILRHTNIPREFALRGKQGEEGTIHMSFKFVPGHPVTPVAMISSGLYGSSVVYGAPMVQPPLMYTTTTTTVPVGPQGTVLSRPPRPEDVERQVAELQSMFPAMEADILRQVLHANANNLEPAINTLLEMTSS* # PASA_UPDATE: g9458.t1, single gene model update, valid-1, status:[pasa:asmbl_7888,status:3], valid-1 NODE_513_length_21997_cov_42.0962 . gene 9 1957 . - . ID=g9458;Name=g9458.t1 NODE_513_length_21997_cov_42.0962 . mRNA 9 1957 . - . ID=g9458.t1;Parent=g9458;Name=g9458.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 1876 1957 . - . ID=g9458.t1.utr5p1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . exon 1840 1957 . - . ID=g9458.t1.exon1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . CDS 1840 1875 . - 0 ID=cds.g9458.t1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . exon 1403 1732 . - . ID=g9458.t1.exon2;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . CDS 1403 1732 . - 0 ID=cds.g9458.t1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . exon 1017 1265 . - . ID=g9458.t1.exon3;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . CDS 1017 1265 . - 0 ID=cds.g9458.t1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . exon 9 521 . - . ID=g9458.t1.exon4;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . CDS 171 521 . - 0 ID=cds.g9458.t1;Parent=g9458.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 9 170 . - . ID=g9458.t1.utr3p1;Parent=g9458.t1 #PROT g9458.t1 g9458 MDGDVSVATAIRDLQVPVELDGASDEDLFITLKRLQRQLEFLDIQEEYIKDEHKNLKREYLRAQEEVKRIQSVPLVIGQFLEAIDQHTGIVGSTTGSNYYVRILSTIDRELLKPSSSVALHKHSNALVDVLPPEADSSISMMGADERPDVSYSDIGGMDIQKQEMREAVELPLTHHELYKQIGIDPPRGVLMYGPPGTGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVGSASVYVCVHVDVFVCIGGLSYLRFW* # PASA_UPDATE: g9459.t1, single gene model update, valid-1, status:[pasa:asmbl_7891,status:3], valid-1 NODE_513_length_21997_cov_42.0962 . gene 2334 4719 . + . ID=g9459;Name=g9459.t1 NODE_513_length_21997_cov_42.0962 . mRNA 2334 4719 . + . ID=g9459.t1;Parent=g9459;Name=g9459.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 2334 2432 . + . ID=g9459.t1.utr5p1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 2334 2532 . + . ID=g9459.t1.exon1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 2433 2532 . + 0 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 2621 2710 . + . ID=g9459.t1.exon2;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 2621 2710 . + 2 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 2844 2863 . + . ID=g9459.t1.exon3;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 2844 2863 . + 2 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 2990 3089 . + . ID=g9459.t1.exon4;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 2990 3089 . + 0 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 3194 3260 . + . ID=g9459.t1.exon5;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 3194 3260 . + 2 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 3393 3441 . + . ID=g9459.t1.exon6;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 3393 3441 . + 1 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 3534 3658 . + . ID=g9459.t1.exon7;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 3534 3658 . + 0 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 3773 3922 . + . ID=g9459.t1.exon8;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 3773 3922 . + 1 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 4068 4240 . + . ID=g9459.t1.exon9;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 4068 4240 . + 1 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . exon 4389 4719 . + . ID=g9459.t1.exon10;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . CDS 4389 4669 . + 2 ID=cds.g9459.t1;Parent=g9459.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 4670 4719 . + . ID=g9459.t1.utr3p1;Parent=g9459.t1 #PROT g9459.t1 g9459 MRHFIAASALLALVALVPVSLALTNGLARTPQMGFNTWNHFACGINEQLIRDTADVIVSSGLRDAGYNYVNLDDCWQISRDANNVIQADTTAFPSGMKALADYIHSKGLKFGLYSDAGYKTCAGRPGSLGYEDIDAQTYASWGVDYLKYDNCNDDKTPPEKRYPVMRDALNKTGRPIFFSMCEWGVDDPAKWSAAVGNSWRTTGDIEDTWASMTSRADANNEWADYAGPGAWNDPDMLEVGNGGMTTNEYRTHFSLWCLMKSPLLIGCDLRNMSVDTKAILLNKEAIAVNQDALGKQGKKVRVVGDLEIWAGPLADGSYAVTLVNRGASRAYVTAEFADIGLGASTPATVRDIWAQADLGKFVGAFGSYVDTHDTIFVRVTPSQ* # ORIGINAL: g9462.t1 original gene structure, not modified by PASA NODE_513_length_21997_cov_42.0962 AUGUSTUS gene 12344 13724 . - . ID=g9462;Name=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS mRNA 12344 13724 . - . ID=g9462.t1;Parent=g9462;Name=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 13579 13724 . - . ID=g9462.t1.exon1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 13579 13724 . - 0 ID=cds.g9462.t1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 13200 13423 . - . ID=g9462.t1.exon2;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 13200 13423 . - 1 ID=cds.g9462.t1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 12945 13100 . - . ID=g9462.t1.exon3;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 12945 13100 . - 2 ID=cds.g9462.t1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 12717 12814 . - . ID=g9462.t1.exon4;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 12717 12814 . - 2 ID=cds.g9462.t1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 12573 12617 . - . ID=g9462.t1.exon5;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 12573 12617 . - 0 ID=cds.g9462.t1;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 12344 12457 . - . ID=g9462.t1.exon6;Parent=g9462.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 12344 12457 . - 0 ID=cds.g9462.t1;Parent=g9462.t1 #PROT g9462.t1 g9462 MPTLTENLVLQLSKASDLKHVTVLNCWGKEIDNIDIVRHMPNLEKVTLSLNQIASLAPLSACSRITELYLRRNRIDSLAELEHLRGLTRLHTLWLKDNPVASLANYRRGVIRILPSLRHLDDSSVDTAEVVESANVDARPFEVPKDDATGGQLHRAATTENMDADESETRSDAGSVEELAVDTPPTARSRMVPTKPFAPADARSLPDKYHSAVSASAFSEDNADHALTAIFALLNIVTNDRARLRVVKEEVERHMAMLPR* # ORIGINAL: g9460.t1 original gene structure, not modified by PASA NODE_513_length_21997_cov_42.0962 AUGUSTUS gene 4718 7818 . - . ID=g9460;Name=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS mRNA 4718 7818 . - . ID=g9460.t1;Parent=g9460;Name=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 5725 7818 . - . ID=g9460.t1.exon1;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 5725 7818 . - 0 ID=cds.g9460.t1;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 5367 5545 . - . ID=g9460.t1.exon2;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 5367 5545 . - 0 ID=cds.g9460.t1;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 4937 5179 . - . ID=g9460.t1.exon3;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 4937 5179 . - 1 ID=cds.g9460.t1;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 4718 4811 . - . ID=g9460.t1.exon4;Parent=g9460.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 4718 4811 . - 1 ID=cds.g9460.t1;Parent=g9460.t1 #PROT g9460.t1 g9460 MSRIIIKNLPKHATDKRIREHFGAKGDVTDVRLVRTPDGVFRQFGFVGFKTEREAREAVKYFHGTYIDTSRIEVTLAKSFGDKDLPRAWSRYSEGSSAFDSRRARTATELAAERAATADKNARDARATEARAKAEVEATKTKRLLSVLYGDGEADPKLNEYLAVMQPRSVTKVWANDDAQVNAVANRARKQRKPKVVAKVESVGAKRPGGEGVLLTRTHVTFGDDADVDPENASEDDIVNGDGNAAVSADEDLDFVEEPDEPVARRPVSVKTAEIGTKGASHAQKKGDPVPTAGAKGTMASKVKGTAVGGTPARTARVYPALGDGDETIAESGRLFLRNIAFSCTEDDLGTLFKPFGPLSEVHVPIDKETKRPTGIAFVSFLMPEHAVRAYKELDAKIFQGRLLHILPAKALKADGRDASEDNAAGSSFKKGKDKKKKEESGSDHNWNTLFIRQDTVVSAMADKYGVSKGDILDAESGGAAVRVALGETHVIAETRRFLEDHGVSLNAFGGRPKARSTTVIVVKNIPHDTSSEELRAMFAKHGTLGRVVVPPTRACALVEYLEPSEARAGLRHLAYTKFKSVPLYLEWAPEGAFSSPPPALGSAANDGAPDVAAVANAVEDDADDNMTSATVFVKNLSFATTDESLRAAFEQKIGNLRSAIVAKKKDPKQPGVSLSMGFGFVEFATKEDALKAVRTMQNSSLDGHALQLKMSTRKGPQSANSAQRGVPATETKAKSTKLLVRNVPFEASKKELKELFGTFGQLKSLRMPKKFDGTHRGFAFIEYMTKQESLHAFQSLSATHLYGRHLVIEWAKEEASVEALREKTQKRFREDNIHLHLASNKKIILEDGAKDKGDESDNSDDMEVDAEM* # ORIGINAL: g9461.t1 original gene structure, not modified by PASA NODE_513_length_21997_cov_42.0962 AUGUSTUS gene 9166 11979 . + . ID=g9461;Name=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS mRNA 9166 11979 . + . ID=g9461.t1;Parent=g9461;Name=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 9166 10145 . + . ID=g9461.t1.exon1;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 9166 10145 . + 0 ID=cds.g9461.t1;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 10278 10639 . + . ID=g9461.t1.exon2;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 10278 10639 . + 1 ID=cds.g9461.t1;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 10753 11237 . + . ID=g9461.t1.exon3;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 10753 11237 . + 2 ID=cds.g9461.t1;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS exon 11365 11979 . + . ID=g9461.t1.exon4;Parent=g9461.t1 NODE_513_length_21997_cov_42.0962 AUGUSTUS CDS 11365 11979 . + 0 ID=cds.g9461.t1;Parent=g9461.t1 #PROT g9461.t1 g9461 MPAHELWVERRQGLRLGLPHAEEHEKGMAFGVACKAHPPASAAALATFLGSVVGVSETVAATGTATASVEDEGVAVASDNVPRDDDCAVTASPADSHHEVPSVTDSGSFSDMDTPDETAGICASSDGVVPPSNPAVSETTSASAPALVAAASCRVSDEEQWATARARHLELERRCGTLLQTLRRQEVRLIRDELDLLRAASSDIDSADVFGFGTETLAFCENSVSSLLDVNMSDLFEHKAKAEASAVDSAPRTKREDGLPARHRTSPASVLLQLSPKERSAAVSHLSGRAEFLECLLDPDATDCDDEDGGAAILEDDPENSVLSTTSNRWSAERRLARSRLSWLDMRVRALGEDAARTAPLCGGQSQALAASLLESSAVMDVEMGGGESAARARGLAGGWVASRAPLVRTVAMPPRARNPLAVFANPAHRRAACVDSSFHPTLSAREDVPGEVAVNLAFDSLSAKSLVRSSLRPSLKEKRGRRGVRRALTGLDEEGMAGGLDLAKGGRKRPLSVGGGVAGGSALKKQRSEPPSLCASMNGGSLGASLNLPSAKKRKEHSAWDFDNIVIPTSMASIARIEVIQYKEIITPEWRDGVKADGLSVSESGLVEENVSDDAFARRHHPQELLEKARYASFVASGRHGAQAGSRAPPPEVQPPAPDVRPGPGATECLTEGMRSDEPAAPTGNSVPVTPLPTPNKRRRSHGASSCGAPNTPLVASGAPGKTAAPAHVLVMRHDGPCGYPPRKFPMTEKEYDRLMMSVGGGVEAELPVRNGGHRRSRESREGHAADETAWHVIPPSAETGRNVVVLKVSKA* # PASA_UPDATE: g9466.t1, single gene model update, valid-1, status:[pasa:asmbl_7890,status:12], valid-1 NODE_513_length_21997_cov_42.0962 . gene 18647 20816 . - . ID=g9466;Name=g9466.t1 NODE_513_length_21997_cov_42.0962 . mRNA 18647 20816 . - . ID=g9466.t1;Parent=g9466;Name=g9466.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 20773 20816 . - . ID=g9466.t1.utr5p1;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . exon 20646 20816 . - . ID=g9466.t1.exon1;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . CDS 20646 20772 . - 0 ID=cds.g9466.t1;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . exon 19049 20521 . - . ID=g9466.t1.exon2;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . CDS 19049 20521 . - 2 ID=cds.g9466.t1;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . exon 18647 18887 . - . ID=g9466.t1.exon3;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . CDS 18730 18887 . - 2 ID=cds.g9466.t1;Parent=g9466.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 18647 18729 . - . ID=g9466.t1.utr3p1;Parent=g9466.t1 #PROT g9466.t1 g9466 MHWEMAVATPVDADSLISAIVEALSREDVPDSQVPTILLPLEAFISKAKDNKAVSDKLRALILEWDLLDIIAEVLRSDADRVVLGWDAVARLGAIVAFAATGIRRDDGRFISLRVPTLLLRSSRRVAERIERLPANNAERKDALVGLGAILASAASVCAAHGSIAVSASSDPLLLLLLSSECGPVATHAIGFLTALVLAHPSVSDAMIKGPHDALDEVVYRLQLDDTSAAAAATGLLSTATKLRPALLRNLNANYPGIRRLLARWYTASFGDTARSLVAQLDKEYEQRVGTERMTASALRIQAAWRGYAARRDVKRALEGITALQRIFRAKKVKEALRADQQRRRTESEIAEHVRLRADRVEYRHREYELLSSLPAARSEGYQRVRETEAAVRIQATWRGLRARRGAAERRVLRPRIAAAVTIQRAVRRFLALRRERTAAASVARAVGDARHSRWSSKDPAAIARARTQAMVRQLRRPTRRPTGSADVRAAVNGTQRLVRCRMIEVRLQGEDAAERRTLAMLTRVRIDAEQLQFAPTLAAVTPDTARTFASSSNVIANVAREAHAKAMHRHQTPWWRLPMDVDVE* # PASA_UPDATE: g9464.t1, single gene model update, valid-1, status:[pasa:asmbl_7889,status:3], valid-1 NODE_513_length_21997_cov_42.0962 . gene 16277 17823 . - . ID=g9464;Name=g9464.t1 NODE_513_length_21997_cov_42.0962 . mRNA 16277 17823 . - . ID=g9464.t1;Parent=g9464;Name=g9464.t1 NODE_513_length_21997_cov_42.0962 . five_prime_UTR 17737 17823 . - . ID=g9464.t1.utr5p1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . exon 17715 17823 . - . ID=g9464.t1.exon1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . CDS 17715 17736 . - 0 ID=cds.g9464.t1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . exon 17608 17615 . - . ID=g9464.t1.exon2;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . CDS 17608 17615 . - 2 ID=cds.g9464.t1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . exon 17074 17449 . - . ID=g9464.t1.exon3;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . CDS 17074 17449 . - 0 ID=cds.g9464.t1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . exon 16277 16907 . - . ID=g9464.t1.exon4;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . CDS 16390 16907 . - 2 ID=cds.g9464.t1;Parent=g9464.t1 NODE_513_length_21997_cov_42.0962 . three_prime_UTR 16277 16389 . - . ID=g9464.t1.utr3p1;Parent=g9464.t1 #PROT g9464.t1 g9464 MAARVANEAKVLGFIGLGNMGAHMARNLRNAGHSVVVYDVNPDAAAAFRQENTAATTVAGSPADVAAAATGAVITMLPSSPHVREVYEGPRGIFSGARRGGLLVDASTIDIAVARDVCRKAADKGLKFVDAPVSGGVGGAQAGSLTFMVGGDEPTFAEAQSVLRLMGKNIVHCGPSGNGQVAKLCNNMLLGISMVGVSEAMNLGERLGMDTKLLAGILNTSSGRCWSSDTYNPCPGVMPNVPSSRDYEGGFGSALMAKDLGLAAGAAADCKAPIPLGALALQLYNLMCAQGYSKKDFSAIFKFLQQK* # ORIGINAL: g4759.t1 original gene structure, not modified by PASA NODE_3702_length_2926_cov_31.0393 AUGUSTUS gene 193 2587 . + . ID=g4759;Name=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS mRNA 193 2587 . + . ID=g4759.t1;Parent=g4759;Name=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 193 292 . + . ID=g4759.t1.exon1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 193 292 . + 0 ID=cds.g4759.t1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 565 635 . + . ID=g4759.t1.exon2;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 565 635 . + 2 ID=cds.g4759.t1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 845 1131 . + . ID=g4759.t1.exon3;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 845 1131 . + 0 ID=cds.g4759.t1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 1370 1476 . + . ID=g4759.t1.exon4;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 1370 1476 . + 1 ID=cds.g4759.t1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 1865 1965 . + . ID=g4759.t1.exon5;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 1865 1965 . + 2 ID=cds.g4759.t1;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS exon 2429 2587 . + . ID=g4759.t1.exon6;Parent=g4759.t1 NODE_3702_length_2926_cov_31.0393 AUGUSTUS CDS 2429 2587 . + 0 ID=cds.g4759.t1;Parent=g4759.t1 #PROT g4759.t1 g4759 MTSPQDALRGHHDAIVSLLKEFVQADDAAASEFGALSESTALYREADALNPETRLGTHVTFADDARGQMSASDVGPSLASGSGVAEPRRPNLGHEGAFEATLSAMSTSDRPKMSASTRELCNACACGDLKEVRRLLKKSADPSKADYDGRTPLHLAAGAGHLDIVKVLCELPAVNINAMDRWHNTPLHESSSHDAVYAYLKSRGAIRIDQSLGYELCLAASLGNLDELKRLRSRSADMTSGDYDARTPLWVHDVIPFLSSLATMRHVSYPSLFL* # ORIGINAL: g1850.t1 original gene structure, not modified by PASA NODE_1679_length_9787_cov_39.9608 AUGUSTUS gene 2371 3925 . - . ID=g1850;Name=g1850.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS mRNA 2371 3925 . - . ID=g1850.t1;Parent=g1850;Name=g1850.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 3898 3925 . - . ID=g1850.t1.exon1;Parent=g1850.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 3898 3925 . - 0 ID=cds.g1850.t1;Parent=g1850.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 2371 3416 . - . ID=g1850.t1.exon2;Parent=g1850.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 2371 3416 . - 2 ID=cds.g1850.t1;Parent=g1850.t1 #PROT g1850.t1 g1850 MRVNSYSPFGQGAKETKIGNNQRTHPDNDIAAVTIKSDYHDSDTDALQAISETPEAPPPTRARQGVHARQDGAPLWSEWSRLLARPTKDVPPELMPNHMRCEMRRILGRGTFGVVAMARDKRRNEIVAVKEFCAGAGGSSDVMCCLQEWAISQHVLELAGSHPHTHFIAEYPELLVYAGACAITMTWVWMCFRSQTVSSQMRTQRMQGGQTIAHTFAREASQWERIWIGQITHAVAFLHSIGVMHCDIKANNALVVADGTLRLTEFNTARFSNAAPDRRKCIRVSALRTAGAHLERKLLLATCGRLGACCCSTRSAFSRARRVCLAHGEDNGGSNSSSNLPAISTRTHMMIPSGKPR* # PASA_UPDATE: g1852.t1, single gene model update, valid-1, status:[pasa:asmbl_2309,status:3], valid-1 NODE_1679_length_9787_cov_39.9608 . gene 6583 8296 . - . ID=g1852;Name=g1852.t1 NODE_1679_length_9787_cov_39.9608 . mRNA 6583 8296 . - . ID=g1852.t1;Parent=g1852;Name=g1852.t1 NODE_1679_length_9787_cov_39.9608 . five_prime_UTR 8243 8296 . - . ID=g1852.t1.utr5p1;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . exon 8044 8296 . - . ID=g1852.t1.exon1;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . CDS 8044 8242 . - 0 ID=cds.g1852.t1;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . exon 7748 7891 . - . ID=g1852.t1.exon2;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . CDS 7748 7891 . - 2 ID=cds.g1852.t1;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . exon 6583 7529 . - . ID=g1852.t1.exon3;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . CDS 7027 7529 . - 2 ID=cds.g1852.t1;Parent=g1852.t1 NODE_1679_length_9787_cov_39.9608 . three_prime_UTR 6583 7026 . - . ID=g1852.t1.utr3p1;Parent=g1852.t1 #PROT g1852.t1 g1852 MALRVDPDGDGEEASSMLADAQDLYFEGRCESAVDLCRAILAINNKDGDTYRLLFISLFNLQRYSEALDIAQHWGINCGENLTQLDGLLRSAYSCGNGAVVKDAAEKLSLTNCPAIVMARARAFAADVGVELNIAAVDRECDGEDDDYISSYVAWADHALHGGCDELHALVNEITERAPEQRPHHGLPLALFVLAAIECGQADDACAAIERWVASGASVDRNVDIVRRLSQIAKGVPGDFVTGASLMGVDALVCSRFERWSRGGGQGSRAPRTAGDDTPPR* # ORIGINAL: g1851.t1 original gene structure, not modified by PASA NODE_1679_length_9787_cov_39.9608 AUGUSTUS gene 3977 6455 . + . ID=g1851;Name=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS mRNA 3977 6455 . + . ID=g1851.t1;Parent=g1851;Name=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 3977 4701 . + . ID=g1851.t1.exon1;Parent=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 3977 4701 . + 0 ID=cds.g1851.t1;Parent=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 4879 6025 . + . ID=g1851.t1.exon2;Parent=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 4879 6025 . + 1 ID=cds.g1851.t1;Parent=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 6279 6455 . + . ID=g1851.t1.exon3;Parent=g1851.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 6279 6455 . + 0 ID=cds.g1851.t1;Parent=g1851.t1 #PROT g1851.t1 g1851 MAPTPEPGHKMTCYYELLGVERDANDDEIKKAYRKMALKWHPDKNPDRIDECTRVFATLQQAYDVLSDTHERQWYDDHRDEILRGSDGRGDASGTGGGVDIMQYFSASAYKGYGDDEEGFYGVYDKLFKTLWQEELSAASAANDSDDEDDGRSTPGRGGDAPVFGKSGDAFEDGTRQFYAFWSNFATAKRFSWCDRYNTREAENRPMRRAMQKENKKFRDAGRKEFNDAVRRLVEFIKRRDKRVRDWQLRQRQVEEERKQEEARRKDAAHKRKQDMKAQMKHATPAWESVAELKASLASVEQALDEEYGKKKSSKARAAAGSNAGGEDGARVEAAAGDDSDDDEEVDGYYCPVCRKGFRSEKQYANHENSKQHQRKVVALRSEMELDDELMGETETPDSTATPANEEETFDGEDGDGGAGAVEGSVSSGDHVPLSVGDADGALDEEGVDREGEQSDGDSDSDAGLESEERRNVGRRKAKARNGSKAKAKAASVDSDGDGAEGLTHVPSGAEDTPSANNADSDREDREDASGGKKKRNKTQERKMRRQQQQQSQTSTSRPSATTTANAGETKKAAVAVGGSAAESDASDAEAVDKTPIGDDEAEDEGAKTKLKGKAKRQAREQQKKQQQQQQPQQTPVEVGLKCQICGFEFPTRNKLFQHIKDTGHAVLVSRPAGDSKGKKKK* # ORIGINAL: g1853.t1 original gene structure, not modified by PASA NODE_1679_length_9787_cov_39.9608 AUGUSTUS gene 8771 9687 . + . ID=g1853;Name=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS mRNA 8771 9687 . + . ID=g1853.t1;Parent=g1853;Name=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 8771 8906 . + . ID=g1853.t1.exon1;Parent=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 8771 8906 . + 0 ID=cds.g1853.t1;Parent=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 9236 9421 . + . ID=g1853.t1.exon2;Parent=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 9236 9421 . + 2 ID=cds.g1853.t1;Parent=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 9587 9687 . + . ID=g1853.t1.exon3;Parent=g1853.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 9587 9687 . + 2 ID=cds.g1853.t1;Parent=g1853.t1 #PROT g1853.t1 g1853 MAAILETLRDAAKGKFSLVRHHATLSKAVNNDEAPTPGYLYNEIAKITFESAEESQELEDYLLRKLESSNANAKVKALKVMRHTCEKGHPAFRQGLTRRTDAIRDAMNYRGIPDPILGDTPFRLVREAAAVGVFVWQRMM* # ORIGINAL: g1849.t1 original gene structure, not modified by PASA NODE_1679_length_9787_cov_39.9608 AUGUSTUS gene 55 1950 . + . ID=g1849;Name=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS mRNA 55 1950 . + . ID=g1849.t1;Parent=g1849;Name=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 55 143 . + . ID=g1849.t1.exon1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 55 143 . + 1 ID=cds.g1849.t1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 326 426 . + . ID=g1849.t1.exon2;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 326 426 . + 2 ID=cds.g1849.t1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 615 791 . + . ID=g1849.t1.exon3;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 615 791 . + 0 ID=cds.g1849.t1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 1069 1173 . + . ID=g1849.t1.exon4;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 1069 1173 . + 0 ID=cds.g1849.t1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 1475 1558 . + . ID=g1849.t1.exon5;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 1475 1558 . + 0 ID=cds.g1849.t1;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS exon 1894 1950 . + . ID=g1849.t1.exon6;Parent=g1849.t1 NODE_1679_length_9787_cov_39.9608 AUGUSTUS CDS 1894 1950 . + 0 ID=cds.g1849.t1;Parent=g1849.t1 #PROT g1849.t1 g1849 YMDFLLSCQAAALDNIQRQIALENNAAAGGKAKKSKAAPAVTAYAVELALIEVHQHLAKGFIRAVCGLQRQGKVRNSSDFRYDSESIRFGHRFAPILRMGSPAPLSHEHFVRATDYTKYQASASELFAAAAECFSVSLNTAQGLIGLQSSPMPLDVHDLEAIVKVCKINAVTMRLLVAGHKSGPADKPSFDFGTHKFYPTIRF* # ORIGINAL: g11660.t1 original gene structure, not modified by PASA NODE_3791_length_2754_cov_40.67 AUGUSTUS gene 702 2517 . + . ID=g11660;Name=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS mRNA 702 2517 . + . ID=g11660.t1;Parent=g11660;Name=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS exon 702 828 . + . ID=g11660.t1.exon1;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS CDS 702 828 . + 0 ID=cds.g11660.t1;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS exon 1132 1281 . + . ID=g11660.t1.exon2;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS CDS 1132 1281 . + 2 ID=cds.g11660.t1;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS exon 1442 1503 . + . ID=g11660.t1.exon3;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS CDS 1442 1503 . + 2 ID=cds.g11660.t1;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS exon 1771 1893 . + . ID=g11660.t1.exon4;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS CDS 1771 1893 . + 0 ID=cds.g11660.t1;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS exon 2425 2517 . + . ID=g11660.t1.exon5;Parent=g11660.t1 NODE_3791_length_2754_cov_40.67 AUGUSTUS CDS 2425 2517 . + 0 ID=cds.g11660.t1;Parent=g11660.t1 #PROT g11660.t1 g11660 MEAGSVETMREDEEPPQLPNNPSAAMRGKNPLPTHVGAVFKEGWAFLEVYGYAVLIGAVLLYIVYVKISARLAAYNAAREREAREALLQRDRNGPRRAEIEAARQRQQELQEQKAREAIKLREQNEEKKRLEAIEEYDRLKTGRTTATRRPPPSVPVPSVVLAVVADTDLLLVPAADEVNGAVG* # ORIGINAL: g4454.t1 original gene structure, not modified by PASA NODE_1921_length_8527_cov_42.0826 AUGUSTUS gene 188 1814 . + . ID=g4454;Name=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS mRNA 188 1814 . + . ID=g4454.t1;Parent=g4454;Name=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS exon 188 552 . + . ID=g4454.t1.exon1;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS CDS 188 552 . + 0 ID=cds.g4454.t1;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS exon 675 781 . + . ID=g4454.t1.exon2;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS CDS 675 781 . + 1 ID=cds.g4454.t1;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS exon 877 969 . + . ID=g4454.t1.exon3;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS CDS 877 969 . + 2 ID=cds.g4454.t1;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS exon 1124 1506 . + . ID=g4454.t1.exon4;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS CDS 1124 1506 . + 2 ID=cds.g4454.t1;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS exon 1776 1814 . + . ID=g4454.t1.exon5;Parent=g4454.t1 NODE_1921_length_8527_cov_42.0826 AUGUSTUS CDS 1776 1814 . + 0 ID=cds.g4454.t1;Parent=g4454.t1 #PROT g4454.t1 g4454 MEGGGHSGHNPRGRGSRRGGGRGGRGRGEGHAAAAPPSPQQQQQQLGSSSRGRGGISSSGGGGGGGKRPAPGAAPPRGPRVPTRAVMRRLPPTLPETILRGLIDEFVGGEYDHFYYVQGDIKLGPNAFSRAYINFRTHESLVKFGLSLNHHTFRDAKGTEHRAIIEYAPFQKIPRKRRSDARQGTIERSADFLAFVDSLANPAPPSRAADADADALAAQSVSDKQTSTPLLEFLWARRQSKGRGKGVRGHKGPPTVSSKPKRTKREATGAGLSGGGKSKGNSSRRGRKGESGGARAIAGSRVEGAGGAQPASRVKKQRPPRQPAGVAS* # PASA_UPDATE: g4455.t1, single gene model update, valid-1, status:[pasa:asmbl_3023,status:3], valid-1 NODE_1921_length_8527_cov_42.0826 . gene 1546 6226 . - . ID=g4455;Name=g4455.t1 NODE_1921_length_8527_cov_42.0826 . mRNA 1546 6226 . - . ID=g4455.t1;Parent=g4455;Name=g4455.t1 NODE_1921_length_8527_cov_42.0826 . five_prime_UTR 6073 6226 . - . ID=g4455.t1.utr5p1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 5769 6226 . - . ID=g4455.t1.exon1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 5769 6072 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 5478 5575 . - . ID=g4455.t1.exon2;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 5478 5575 . - 2 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 5284 5376 . - . ID=g4455.t1.exon3;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 5284 5376 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 5038 5187 . - . ID=g4455.t1.exon4;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 5038 5187 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 4693 4897 . - . ID=g4455.t1.exon5;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 4693 4897 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 4320 4472 . - . ID=g4455.t1.exon6;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 4320 4472 . - 2 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 4059 4198 . - . ID=g4455.t1.exon7;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 4059 4198 . - 2 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 3656 3927 . - . ID=g4455.t1.exon8;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 3656 3927 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 3449 3556 . - . ID=g4455.t1.exon9;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 3449 3556 . - 1 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 3001 3361 . - . ID=g4455.t1.exon10;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 3001 3361 . - 1 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 2761 2898 . - . ID=g4455.t1.exon11;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 2761 2898 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 2357 2607 . - . ID=g4455.t1.exon12;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 2357 2607 . - 0 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . exon 1546 2243 . - . ID=g4455.t1.exon13;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . CDS 2021 2243 . - 1 ID=cds.g4455.t1;Parent=g4455.t1 NODE_1921_length_8527_cov_42.0826 . three_prime_UTR 1546 2020 . - . ID=g4455.t1.utr3p1;Parent=g4455.t1 #PROT g4455.t1 g4455 MASFLNAFSLRLNHRIEPRLVTVGRYDGLHDALTVGTRSGRVVVHNPHARTPSGTAAAAANTQTASTPLASAVEGLGGPSRPLADELSFFNFNCEVTALAAGRLGKDKKEWLFVGSQSHLQAYNITENADCFYKDVPDGVNALVVGPAGSNHESLVFAGGNCSIQGFDAEGGDRFWTVTGDNVSALALCDVDGDGRSELLVGSDDFDIRTYRDDEVISETSEADKVVSLCRLTGGRYGFGTAGGNVGVYGASGIRLWRSRAQAVPVAMCGYDIDPDGVPEVVIGWSNGVVEVRSEQTGEIIFSDELPSPIAGVVRADYRRNGRREIIVCSVDGEIRGYVPASEKRRTLPPPPPGKPVAFGMQPMKADGDDRQIAELMRQKEDLVRELSALDALLTERSRVESSQPADALSESHAHGAIPADTRVAIAFEAIPGSDQQQQHAHLRMAVSTSNSALIRAVVVFADAFPGGSLSVHPPQGAASESLQVPMRFAREAPEELDIRVIVGTKSGRKCHVFELTERLPRFAMFAKQGGKGALPEVPVGVGGVGGASSGAGTGSSSGQAAEGRLQLVRGGSLGLNLGMGPGAPGGVGVANQAGAGALSLARVPDGQPLRKEPRSTVTFKIDERPAKVASFIARSFMGGSEFDVPDGGSLSVAFVALQTNEPVVFNMTAGSGELVLRTDDMDLAGDIAQSLSADLAINDIASIAEFPAEMDRLREVLAAVDEHNSFRQLLVTGVADAANLIRALLLRAEDARCLGRTETMKDAYAQLQRVNADLLAEHAKRLTNHTGLLESLRTVNRAIQRAGRLRGESAIGMAAHTRTHTHAHTCTHAT* # PASA_UPDATE: g4456.t1, single gene model update, valid-1, status:[pasa:asmbl_3025,status:12], valid-1 NODE_1921_length_8527_cov_42.0826 . gene 6401 8495 . + . ID=g4456;Name=g4456.t1 NODE_1921_length_8527_cov_42.0826 . mRNA 6401 8495 . + . ID=g4456.t1;Parent=g4456;Name=g4456.t1 NODE_1921_length_8527_cov_42.0826 . five_prime_UTR 6401 6452 . + . ID=g4456.t1.utr5p1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 6401 6486 . + . ID=g4456.t1.exon1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 6453 6486 . + 0 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 6575 6899 . + . ID=g4456.t1.exon2;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 6575 6899 . + 2 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 6995 7050 . + . ID=g4456.t1.exon3;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 6995 7050 . + 1 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 7182 7252 . + . ID=g4456.t1.exon4;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 7182 7252 . + 2 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 7347 7461 . + . ID=g4456.t1.exon5;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 7347 7461 . + 0 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 7599 7818 . + . ID=g4456.t1.exon6;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 7599 7818 . + 2 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 8007 8215 . + . ID=g4456.t1.exon7;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . CDS 8007 8124 . + 1 ID=cds.g4456.t1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . exon 8360 8495 . + . ID=g4456.t1.exon8;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . three_prime_UTR 8125 8215 . + . ID=g4456.t1.utr3p1;Parent=g4456.t1 NODE_1921_length_8527_cov_42.0826 . three_prime_UTR 8360 8495 . + . ID=g4456.t1.utr3p2;Parent=g4456.t1 #PROT g4456.t1 g4456 MGHFDALAFCDAGHLAVVASALTGRTWGGSIHVISPAPTKESAGVIDASVTAPAVHGMADAAWISSDILATACDDGGLRLHKVSFGKIDEVAAVVEHHDIVTALAFSSTSVIATSSSDASVKLWSLDNGELRSLRTLKGHCDAVHALSWDPLQPGLLVSVSRDGAIILWDDRQPSFVHRTASCDVMPTSVVCHSRGSLIVGHATGTVSVCDLRQWCTSVAAEAGEGRERGAPTANLQPHTGSVRRMVAVGVNSIATCGDDGAVFITDLSNATQEYQDRRHTDFVRGLAVDTSGKLWSAGWDGRLLQHEQGSP* # PASA_UPDATE: g1293.t1, single gene model update, valid-1, status:[pasa:asmbl_7712,status:12], valid-1 NODE_4909_length_1147_cov_36.1063 . gene 93 1098 . - . ID=g1293;Name=g1293.t1 NODE_4909_length_1147_cov_36.1063 . mRNA 93 1098 . - . ID=g1293.t1;Parent=g1293;Name=g1293.t1 NODE_4909_length_1147_cov_36.1063 . five_prime_UTR 1078 1098 . - . ID=g1293.t1.utr5p1;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . exon 837 1098 . - . ID=g1293.t1.exon1;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . CDS 837 1077 . - 0 ID=cds.g1293.t1;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . exon 447 562 . - . ID=g1293.t1.exon2;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . CDS 447 562 . - 2 ID=cds.g1293.t1;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . exon 93 179 . - . ID=g1293.t1.exon3;Parent=g1293.t1 NODE_4909_length_1147_cov_36.1063 . CDS 93 179 . - 0 ID=cds.g1293.t1;Parent=g1293.t1;3_prime_partial=true #PROT g1293.t1 g1293 MSSFSEGSGEKLIRKNAKEFVQYGRRQFSRIYPSGRRIESSNYNPVPFWNVGSQMVALNYQTFDTAMQLNIARFEQNGGCGYLLKPYVMRGDFDFDPNTTDSIEHVPPTLLTVKILSGQHLCLSKDKNVHPYVEVEVFGLPVDCGKQR # ORIGINAL: g4588.t1 original gene structure, not modified by PASA NODE_2640_length_5566_cov_39.8621 AUGUSTUS gene 1155 2426 . - . ID=g4588;Name=g4588.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS mRNA 1155 2426 . - . ID=g4588.t1;Parent=g4588;Name=g4588.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS exon 1155 2426 . - . ID=g4588.t1.exon1;Parent=g4588.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS CDS 1155 2426 . - 0 ID=cds.g4588.t1;Parent=g4588.t1 #PROT g4588.t1 g4588 MKLIFAACISALIVAATIYVCEYAIFEQAVAQCSWPSSPNPFPSEFDGSTRKTLLPVRVMVLADTHIIGYKRGHWFDRLRRERMMQTAYASAVSHLSPDASIFLGDVFDEGTIASDAEFSLYANRFHELFPPQRRSPAWPGYVSPFSQVKGPRQTPAVTVVVAGNHDIGMHGEMTPERIVRFEQFMEGRAVDMFVIGGHEFVRINSMAVRVGECVCSDCSRAERGLQDIVARLGTITDQTTLLARPVVLSHFPFDCPSSLECPEPKTGTGKKGQSDAAAVDTAYQPGHDYMSSASSNHIMSMLHPRAILSGHAHHWCGCTHRGGIKETTVTSFNWRNTDRPGFALLTLGADSNQVTVSPCHLPSESTVIAAYASGLGLALIVLSVGVCLDRTPAGRKASRSSASHMAGYNTYTAFDDDKDKLI* # ORIGINAL: g4589.t1 original gene structure, not modified by PASA NODE_2640_length_5566_cov_39.8621 AUGUSTUS gene 2854 4824 . + . ID=g4589;Name=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS mRNA 2854 4824 . + . ID=g4589.t1;Parent=g4589;Name=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS exon 2854 3642 . + . ID=g4589.t1.exon1;Parent=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS CDS 2854 3642 . + 0 ID=cds.g4589.t1;Parent=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS exon 4116 4264 . + . ID=g4589.t1.exon2;Parent=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS CDS 4116 4264 . + 0 ID=cds.g4589.t1;Parent=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS exon 4443 4824 . + . ID=g4589.t1.exon3;Parent=g4589.t1 NODE_2640_length_5566_cov_39.8621 AUGUSTUS CDS 4443 4824 . + 1 ID=cds.g4589.t1;Parent=g4589.t1 #PROT g4589.t1 g4589 MRIPTPTAHLVARRLQQSATATSRVSPQRCIALSTTHPEQQLRHFQSAHVQHEHVPRTKWYGIKASEEMIRKFPLVSEPAKPRLTRSWIDDRRQRSSCHALSNYVDATIVDAESVSASEIKDVIVSVSTPTSVSDAVSTSVTASLSVTTTSASLSISVVASETVDGEEKNNASIANPEITRSLRRHESIAVRSDAPTENGGGIRYYVVAGNAYPSVTSVLKSTGYSKPLELWREKFAAENNMTDEEMEGYLSNLRSEGSRLHAIVDRYYTSHEDFAESGGDADISGLWLSLKPARDEISPLDVAALESVVLHRGLGYAGRIDMVALYKGSPCVVDWKTSRSKRTKMSQLKRDYLLQLGAYAAAINADPAYPFSVKEGLIVTCYKDGSPCDMHHIDEENMERAFRAFHDRLARFRVQRHDIARAECEFIAKRTAVEKTPM* # ORIGINAL: g4045.t1 original gene structure, not modified by PASA NODE_18501_length_179_cov_189.433 AUGUSTUS gene 2 179 . + . ID=g4045;Name=g4045.t1 NODE_18501_length_179_cov_189.433 AUGUSTUS mRNA 2 179 . + . ID=g4045.t1;Parent=g4045;Name=g4045.t1 NODE_18501_length_179_cov_189.433 AUGUSTUS exon 2 179 . + . ID=g4045.t1.exon1;Parent=g4045.t1 NODE_18501_length_179_cov_189.433 AUGUSTUS CDS 2 179 . + 2 ID=cds.g4045.t1;Parent=g4045.t1 #PROT g4045.t1 g4045 LSSRRRRPRSLRRPCARPSRREWSLTPSTRRRSTRPSAPKSRMVLSSRRRRPRSLRRPC # ORIGINAL: g9504.t1 original gene structure, not modified by PASA NODE_3332_length_3712_cov_44.8326 AUGUSTUS gene 324 2099 . - . ID=g9504;Name=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS mRNA 324 2099 . - . ID=g9504.t1;Parent=g9504;Name=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS exon 1940 2099 . - . ID=g9504.t1.exon1;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS CDS 1940 2099 . - 0 ID=cds.g9504.t1;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS exon 1647 1748 . - . ID=g9504.t1.exon2;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS CDS 1647 1748 . - 2 ID=cds.g9504.t1;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS exon 947 1346 . - . ID=g9504.t1.exon3;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS CDS 947 1346 . - 2 ID=cds.g9504.t1;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS exon 324 640 . - . ID=g9504.t1.exon4;Parent=g9504.t1 NODE_3332_length_3712_cov_44.8326 AUGUSTUS CDS 324 640 . - 1 ID=cds.g9504.t1;Parent=g9504.t1 #PROT g9504.t1 g9504 MSTTGNIKLLVAKNLVIRRRRVCFFTCEIVAPLFFFMILAGSSLLLKSKTKLEFIYDADSILPLEALKAANESGTTLSVAYSPSTPWAAAIMTSFQATANRALATEGMLNLAPIDSADAMERIVAEEPSKYMAGVVFENIPATLVEPLPAQLRYTLRMCSSCTPDTDKTYPEIVGGVEGPGDDKTEYAQSGFLFLQRHVDASLTLHMAGIDVSGSTVTFNRFPYPQYEKNTFVLVIGSTFPLFVVLSWLFTVSMAVKDVVYEKERRLKESMKMMGITDFQTKISFWISIMSVLLLSLLIMTALAKGQITAQSDVLVIFIYLLLVRF # ORIGINAL: g4541.t1 original gene structure, not modified by PASA NODE_780_length_17781_cov_42.2938 AUGUSTUS gene 15870 17230 . - . ID=g4541;Name=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS mRNA 15870 17230 . - . ID=g4541.t1;Parent=g4541;Name=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 17126 17230 . - . ID=g4541.t1.exon1;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 17126 17230 . - 0 ID=cds.g4541.t1;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 16912 17034 . - . ID=g4541.t1.exon2;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 16912 17034 . - 0 ID=cds.g4541.t1;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 16522 16795 . - . ID=g4541.t1.exon3;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 16522 16795 . - 0 ID=cds.g4541.t1;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 16170 16443 . - . ID=g4541.t1.exon4;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 16170 16443 . - 2 ID=cds.g4541.t1;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 15870 16080 . - . ID=g4541.t1.exon5;Parent=g4541.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 15870 16080 . - 1 ID=cds.g4541.t1;Parent=g4541.t1 #PROT g4541.t1 g4541 MGQALRVTEVRVRRPGCDTVLYRVKIPAEGIRAPMLLFEPSLMKYVAECAPAVAIRSGLLPSDDPEDLFEDLFTAEELVSNRGSSVRYNLGVGTGGTWPCQWEDCHCVIEGYDAVLDHLLDSHTDAAAAEFECRWQGCARAGKLLTTKAALVTHLKKHVADLAVSARASDKDRCNPDVGRQPQPSTESPCARKNTVAAGPAVVEPETVLSEPELGLDACIMRSIGACSSEELQRRMFKSILVVGGAHQFDGFVHFLENRLSDSVHNIRRQQDSLRVMSATKNLDPEIISWKGGAVFGRLPSFAEMGIGKPEWIARGMRAVRETAAFVL* # PASA_UPDATE: g4539.t1, single gene model update, valid-1, status:[pasa:asmbl_9347,status:3], valid-1 NODE_780_length_17781_cov_42.2938 . gene 11277 12774 . + . ID=g4539;Name=g4539.t1 NODE_780_length_17781_cov_42.2938 . mRNA 11277 12774 . + . ID=g4539.t1;Parent=g4539;Name=g4539.t1 NODE_780_length_17781_cov_42.2938 . five_prime_UTR 11277 11325 . + . ID=g4539.t1.utr5p1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 11277 11440 . + . ID=g4539.t1.exon1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 11326 11440 . + 0 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 11551 11619 . + . ID=g4539.t1.exon2;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 11551 11619 . + 2 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 11697 11834 . + . ID=g4539.t1.exon3;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 11697 11834 . + 2 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 11963 12035 . + . ID=g4539.t1.exon4;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 11963 12035 . + 2 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 12123 12265 . + . ID=g4539.t1.exon5;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 12123 12265 . + 1 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . exon 12409 12774 . + . ID=g4539.t1.exon6;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . CDS 12409 12626 . + 2 ID=cds.g4539.t1;Parent=g4539.t1 NODE_780_length_17781_cov_42.2938 . three_prime_UTR 12627 12774 . + . ID=g4539.t1.utr3p1;Parent=g4539.t1 #PROT g4539.t1 g4539 MSLEPARRLLGSGLLAVYKPRGMLSAATVGAVKRALASGYRGAPPKVGHGGTLDSHARGVLVIGINDGCKRLGSFLACDKEYIVEGALGHSTTTDDLDGQVMIQRPYDHVTHEALTAALASFVGRISQAPPVYSAVKRQGVRLSDAARQGRSVDIEAAIRTVIVHEAKCISFAPPLFRLYVRCGSGTYIRSIVRDLGDKLQSAAHVTDLERTRQGIFSSADAVTVENWNAGVLSGAMRPVAAAGLGSVHAV* # ORIGINAL: g4538.t1 original gene structure, not modified by PASA NODE_780_length_17781_cov_42.2938 AUGUSTUS gene 6721 10717 . - . ID=g4538;Name=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS mRNA 6721 10717 . - . ID=g4538.t1;Parent=g4538;Name=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 10691 10717 . - . ID=g4538.t1.exon1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 10691 10717 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 10441 10552 . - . ID=g4538.t1.exon2;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 10441 10552 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 10231 10359 . - . ID=g4538.t1.exon3;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 10231 10359 . - 2 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 9882 10053 . - . ID=g4538.t1.exon4;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 9882 10053 . - 2 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 9687 9717 . - . ID=g4538.t1.exon5;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 9687 9717 . - 1 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 9335 9505 . - . ID=g4538.t1.exon6;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 9335 9505 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 8900 9172 . - . ID=g4538.t1.exon7;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 8900 9172 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 8419 8771 . - . ID=g4538.t1.exon8;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 8419 8771 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 7978 8195 . - . ID=g4538.t1.exon9;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 7978 8195 . - 1 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 7727 7863 . - . ID=g4538.t1.exon10;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 7727 7863 . - 2 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 7514 7613 . - . ID=g4538.t1.exon11;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 7514 7613 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 7253 7365 . - . ID=g4538.t1.exon12;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 7253 7365 . - 2 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 7001 7162 . - . ID=g4538.t1.exon13;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 7001 7162 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 6846 6911 . - . ID=g4538.t1.exon14;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 6846 6911 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 6721 6738 . - . ID=g4538.t1.exon15;Parent=g4538.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 6721 6738 . - 0 ID=cds.g4538.t1;Parent=g4538.t1 #PROT g4538.t1 g4538 MVSQLVSKKGDARKIVLTQCTLWALLELQMFQSPKDEIGLVLFGTKETNNNLADESSYRNVCVVHPVRTASTELLRSVTEIAPGPKSADFIDALIVAIDALVLATENRKVDTRRIVLFTDGSSPFNPDSLDNIVQTIQSQDILLQVAGIVCDAGSDKASEEAKRVIGRLVQDVAGESFSFEVAMQNLSDFKTKTFKQTTTFRGNLEIGTTVKIPMYSYTYVSMLNAPTLKKVSPVATTSNSADAMEVKRVSSYYASDETQLQREDLAKGYKYGDTLVPFLDVDEANLKMKTERRLAVIGFTQLDLIPRHHYVDGVLAMVSDPKDASAHRAFGALFRAMFWTGTVAIVRYVFRANAEPKLGFLSAGLVGGHECMLYSRLPFAEDVRQYEFASLDRKGTELSPEQLAAAELLVTSFDLMVSVPGSVKPVEMLKPKRTFNPAIQRFYQCVQHRALHPEDPIPVLDEAIRAYMEPNARLVDASKAAVERLSTLFPLKKIEKRQEKGAAAKVWASTEAADLAAASDSRPAKRARTDGNADDIVPMEILSDGPAVSVGSVQPLDDFRAMLSRRDVDLTTEAVKQMQGRISEFIATSINGDNYPKALECLRALRDACVKAEESASFNTFLEKLKDGTSGRDASLWELIVSARVTLISADEATDSTVSPDDAAKFLVREKQAEAPPTAAADEEEDWEALMK* # PASA_UPDATE: g4540.t1, single gene model update, valid-1, status:[pasa:asmbl_9344,status:12],[pasa:asmbl_9346,status:12], valid-1 NODE_780_length_17781_cov_42.2938 . gene 12762 15377 . - . ID=g4540;Name=g4540.t1 NODE_780_length_17781_cov_42.2938 . mRNA 12762 15377 . - . ID=g4540.t1;Parent=g4540;Name=g4540.t1 NODE_780_length_17781_cov_42.2938 . five_prime_UTR 15077 15377 . - . ID=g4540.t1.utr5p1;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . exon 14873 15377 . - . ID=g4540.t1.exon1;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . CDS 14873 15076 . - 0 ID=cds.g4540.t1;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . exon 14176 14767 . - . ID=g4540.t1.exon2;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . CDS 14176 14767 . - 0 ID=cds.g4540.t1;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . exon 12762 14059 . - . ID=g4540.t1.exon3;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . CDS 12990 14059 . - 2 ID=cds.g4540.t1;Parent=g4540.t1 NODE_780_length_17781_cov_42.2938 . three_prime_UTR 12762 12989 . - . ID=g4540.t1.utr3p1;Parent=g4540.t1 #PROT g4540.t1 g4540 MPEEVDNGPPPGLAHPSPPGNSLYSRLTAEFKSAPSPKRIGYYEFEKAIGEGNFAKVKLATHTLTGEKVAIKIIDKTKLDKSTAKKLFREVRIMKLLNHEHVIRLYEVLDTPKELFLVLEYAPGGEIFDYLVAHGRMKEKEARKYFRQIVSAVDYCHRLHIIHRDLKAENLLLDANLNIKIADFGFSNQFTPGDKLSTWCGSPPYAAPELFQGKEYNGPEVDLWSLGVVLYVLVCGALPFDGTTLTKLRARVLAGKFKVPFYMSTDCERLVKKLLVIDTTKRCTMEQLKADKWLNEGYSRPISDAEVDALDDPSDREELLLKLEKIGIDRSAVVNSLNQNLYDHVGATYYMLSHQRAKARRKTLPSEDPDLDVEGDGEASTSQQPQQQQQDAAEERQKHQRRATTSGVQEGAAATVAATPATATAQRASQSSAATPGTAGSASASGPAHGHGHAQHGQAGDHHEASDSGRKRAHTVVADVGVAQRQPVAPIPQDSGEPSTPEPKRQSVMSAIRSKFTRNKSSTTDKPEPRSLRFTFSVSTTSAKPAEAILEEMKRVLNEGRIHWEQKEPFLLACIAEELHFEMEVCKLPRLAMNGLRLKRNSGNSWAYKQICSDLIGKMQL* # ORIGINAL: g4535.t1 original gene structure, not modified by PASA NODE_780_length_17781_cov_42.2938 AUGUSTUS gene 141 1691 . + . ID=g4535;Name=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS mRNA 141 1691 . + . ID=g4535.t1;Parent=g4535;Name=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 141 306 . + . ID=g4535.t1.exon1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 141 306 . + 1 ID=cds.g4535.t1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 468 590 . + . ID=g4535.t1.exon2;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 468 590 . + 0 ID=cds.g4535.t1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 703 823 . + . ID=g4535.t1.exon3;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 703 823 . + 0 ID=cds.g4535.t1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 991 1112 . + . ID=g4535.t1.exon4;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 991 1112 . + 2 ID=cds.g4535.t1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 1198 1324 . + . ID=g4535.t1.exon5;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 1198 1324 . + 0 ID=cds.g4535.t1;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 1636 1691 . + . ID=g4535.t1.exon6;Parent=g4535.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 1636 1691 . + 2 ID=cds.g4535.t1;Parent=g4535.t1 #PROT g4535.t1 g4535 HIYTASVDKTLAVWDADTQQRIRKLRGHGDIVNACCPARRGSPIVVSGSNDGTIKLWDARQRGEVHSMQNKYQVTSVCFGDAGDEVITGGLDNDIKVWDLRKLEVAYSMAGHADTVTGLSLSPDGSYVLSNSMDNTVRIWDVRPYAPEQRCVKVFTGAQHNFEKNLLRCAWSPDGEKITAGSADRFVYVWETSSRRILYKLPGHAGSVNEVVFHPKEPIVASCSSDKRVYIGELELS* # PASA_UPDATE: g4536.t1, single gene model update, valid-1, status:[pasa:asmbl_9345,status:3], valid-1 NODE_780_length_17781_cov_42.2938 . gene 1786 3928 . - . ID=g4536;Name=g4536.t1 NODE_780_length_17781_cov_42.2938 . mRNA 1786 3928 . - . ID=g4536.t1;Parent=g4536;Name=g4536.t1 NODE_780_length_17781_cov_42.2938 . five_prime_UTR 3847 3928 . - . ID=g4536.t1.utr5p1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . exon 3589 3928 . - . ID=g4536.t1.exon1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . CDS 3589 3846 . - 0 ID=cds.g4536.t1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . exon 3351 3444 . - . ID=g4536.t1.exon2;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . CDS 3351 3444 . - 0 ID=cds.g4536.t1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . exon 2983 3204 . - . ID=g4536.t1.exon3;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . CDS 2983 3204 . - 2 ID=cds.g4536.t1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . exon 2725 2876 . - . ID=g4536.t1.exon4;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . CDS 2725 2876 . - 2 ID=cds.g4536.t1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . exon 1786 2539 . - . ID=g4536.t1.exon5;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . CDS 1838 2539 . - 0 ID=cds.g4536.t1;Parent=g4536.t1 NODE_780_length_17781_cov_42.2938 . three_prime_UTR 1786 1837 . - . ID=g4536.t1.utr3p1;Parent=g4536.t1 #PROT g4536.t1 g4536 MDAAHSVTHHGVEPGVNVAIREDHSDGIDGMQDMDSMCARDDALTIAGAPPGVTRDGWKVHEQQTEWSEPDRPCHLAVLSEELTMAIFSYLEPTDLISLSCVSRTMHRLAGDEHLWKALYLRHLCLLRAVGWDTLHPRGGASWKALFREQHFCGARRPGLPDSAAPQDAIPRKPRSLRKARYSVLYIGRRGAGKATIFYHLKFGPSHNRTYYLGRFGETLVLEVPDINTVFRFEVWDLPDGGPETEIRPFQPVDAIIVVDDGRGPPPGCPSLPVLVERLSHAAQVVSASAPPLLVLANKMDLRAHLGPAASGAAEFARRLSLIDGRGVGAGWLSRSSSTSSTGSLSSIGSGSFAVHPGSLQSAHGVHASGWSLPSASLPPPYVGASLPQGLGRWRVQCCCGLSLEGVLDGLAWLSTELGSTDGRRSRALSSQALQSPGSQRESRHSISSTGSISPTAGMWGAPHDTQTGRMHAPL* # ORIGINAL: g4537.t1 original gene structure, not modified by PASA NODE_780_length_17781_cov_42.2938 AUGUSTUS gene 4591 6716 . + . ID=g4537;Name=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS mRNA 4591 6716 . + . ID=g4537.t1;Parent=g4537;Name=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 4591 4719 . + . ID=g4537.t1.exon1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 4591 4719 . + 0 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 4821 5014 . + . ID=g4537.t1.exon2;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 4821 5014 . + 0 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 5154 5253 . + . ID=g4537.t1.exon3;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 5154 5253 . + 1 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 5362 5488 . + . ID=g4537.t1.exon4;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 5362 5488 . + 0 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 5659 5815 . + . ID=g4537.t1.exon5;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 5659 5815 . + 2 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 5915 6016 . + . ID=g4537.t1.exon6;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 5915 6016 . + 1 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 6159 6244 . + . ID=g4537.t1.exon7;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 6159 6244 . + 1 ID=cds.g4537.t1;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS exon 6562 6716 . + . ID=g4537.t1.exon8;Parent=g4537.t1 NODE_780_length_17781_cov_42.2938 AUGUSTUS CDS 6562 6716 . + 2 ID=cds.g4537.t1;Parent=g4537.t1 #PROT g4537.t1 g4537 MPVSDVDTDLWDETLALHEAFQQILYAQVKHLCERHHFPCALRDEVAAMWFAFLARSDTHGLSATDIGPATASLGSSCRDLRLQHSLAFIFLALVRLREGVLPVDIVVWASSGRLPYLAGHTLLDPDFRLGAGAWQTIRPRTLPSAEGVYRLAVELVPYLAIGMPPLNISVILSRLARRLCLPSEMDTFALNLAAVVAPEMFVSFPHTPSPSVPAILMATVVAAAKATWGLDFDDEPPMLPVGSGTWKSAASHLAHEERWEVATPPWTERDLTGAILNEEAHLDFCRSHIFRNAVADDAARIAGVDKDTLYRACTDTDRAILRFQVQLLRDTEDEVRDARDGSSDFQPT* # PASA_UPDATE: g669.t1, single gene model update, valid-1, status:[pasa:asmbl_6305,status:12], valid-1 NODE_360_length_26003_cov_46.1677 . gene 20667 24200 . - . ID=g669;Name=g669.t1 NODE_360_length_26003_cov_46.1677 . mRNA 20667 24200 . - . ID=g669.t1;Parent=g669;Name=g669.t1 NODE_360_length_26003_cov_46.1677 . exon 21229 24200 . - . ID=g669.t1.exon1;Parent=g669.t1 NODE_360_length_26003_cov_46.1677 . CDS 21229 24200 . - 0 ID=cds.g669.t1;Parent=g669.t1 NODE_360_length_26003_cov_46.1677 . exon 20832 21066 . - . ID=g669.t1.exon2;Parent=g669.t1 NODE_360_length_26003_cov_46.1677 . CDS 20832 21066 . - 1 ID=cds.g669.t1;Parent=g669.t1 NODE_360_length_26003_cov_46.1677 . exon 20667 20726 . - . ID=g669.t1.exon3;Parent=g669.t1 NODE_360_length_26003_cov_46.1677 . CDS 20667 20726 . - 0 ID=cds.g669.t1;Parent=g669.t1 #PROT g669.t1 g669 MAAAKTASHAFAAGASRPSLVQDDFHSDLQQKLSKKIAQLTKVIYHLHTKNDEYEADMRDQADAYEAEIQSVTRDAFAKVQALRSELETLRDARGGREVVEAQLREHERSREQAMKDFIEFKKRTKEREDALRAEHKDVVEQMASELERTRRQFEERLSSFAEVTRLMEQNRSLSSDHKHQKELEETVRHHQEAYNTMLQERLRSEDALQERFEAERDALQRDLAQQRDVGERHAAELNSLQTQLQDAAARLSAAETAHATAVASLAETHDEHARAIDALKQEHEAHCNGVADAHARALAQLHSQLGGDRNSIVRQLEEQQALCSGHIQQRDSAEQRAKELEAKYRVAATSADGLRSQVELAQASAEEQRTLCSDLERRLDESVQHAASLHVECASQKDTIDKLNAAIKHHQRDLESVKNASARKDDDRHDLEEQRAMCADLEHRLAESARQVAQLETECISYKDTIAALNASIEHQQHDLELERCNSDRKEGEWRDATARKDRDVAEKLARIAQLDSECARLNGALASAQSSSAALELAFAAERRAFEEQLVREREAASLQARESSQSTSIIRELRATVEMLRSEHSRTTDAMTAAHAAELAQLCGRMTESSAAAIAQLKSEHAESSAMLSAANTAAMKSLDAKHAEKIQTMQNVHSAEVASLKAQMSKSSSDVDEMRLRHKEEVALLKGAHAEDMRQAAANHAEELAAERARYDADMGAITLKYAADMKSITAAHNAETAALQSGGEEALAHMKGEYEAVIARMETERDECVRELSASNAANVERLSTEMEERVRILEKKHADALASLRHEHASLVDTLRRENADTVRALAASHSSELESQKSHMSASHAAEMERSLRTMQGQHDERMMHLAEKHRVEKEDLSATISQLELTLASKRAAIDSLEKTVVELREMVSQGRGELEAKVREMLSIRREAVQQQQQLKEDMSTRHAGEVDRMRAEHGSECARILGDFELSKGQLMDRIASMEQSLTEADERYERRDSRPEDLQHIRQLEHALVTLQEAISKLQGDMKYYQLELVNRDQSYNKVFGNNLSVGVLNPMDAMKQKKKKDKKDTKPAKLPPIPMF* # PASA_UPDATE: g665.t1, single gene model update, valid-1, status:[pasa:asmbl_6299,status:12], valid-1 NODE_360_length_26003_cov_46.1677 . gene 4114 6215 . + . ID=g665;Name=g665.t1 NODE_360_length_26003_cov_46.1677 . mRNA 4114 6215 . + . ID=g665.t1;Parent=g665;Name=g665.t1 NODE_360_length_26003_cov_46.1677 . five_prime_UTR 4114 4172 . + . ID=g665.t1.utr5p1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . exon 4114 4253 . + . ID=g665.t1.exon1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . CDS 4173 4253 . + 0 ID=cds.g665.t1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . exon 4730 4885 . + . ID=g665.t1.exon2;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . CDS 4730 4885 . + 0 ID=cds.g665.t1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . exon 5069 5108 . + . ID=g665.t1.exon3;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . CDS 5069 5108 . + 0 ID=cds.g665.t1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . exon 5295 5453 . + . ID=g665.t1.exon4;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . CDS 5295 5453 . + 2 ID=cds.g665.t1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . exon 5735 6215 . + . ID=g665.t1.exon5;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . CDS 5735 6192 . + 2 ID=cds.g665.t1;Parent=g665.t1 NODE_360_length_26003_cov_46.1677 . three_prime_UTR 6193 6215 . + . ID=g665.t1.utr3p1;Parent=g665.t1 #PROT g665.t1 g665 MMARRWLVTFDVRGTLLRVRGTAGQQYADAASRIGVRVAPDALEQSFLDAYRSIAKQHPNFGHGVRGHPEMRSRDWWCMVVNRAFEGAGASQAIGSRFPALFASLYDGFARHDAWEVYPDVRHVLESLTKDRHVLGVVSNFDERLDAILEGHGLHKYFSFVLASGVFGAGKPDARIYQEALHLAQPLMDGHVHRDARAASPSVLPTDTCGDGLCEDGQWDAPPLIDKHPFTFPALHVGDDRKNDFDGARASAMHALLVKRECQGKGELLAQHEIADLNGVLRYLASREGNHEVLATS* # ORIGINAL: g670.t1 original gene structure, not modified by PASA NODE_360_length_26003_cov_46.1677 AUGUSTUS gene 24756 25418 . + . ID=g670;Name=g670.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS mRNA 24756 25418 . + . ID=g670.t1;Parent=g670;Name=g670.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 24756 25418 . + . ID=g670.t1.exon1;Parent=g670.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 24756 25418 . + 0 ID=cds.g670.t1;Parent=g670.t1 #PROT g670.t1 g670 MTSVFSIDVECIATGRGHSARAVCSVAVVDSSERVLLNSIVCPDMPVYNYLTPITGFREGDLDGGMPLSQVIADVKALLSPQAVLVGQSPANDIEWLGLVAGVHFASVIDLSKMFEAYNPRYRNYSRFSLQHEAAVLLNSPPQHAHHDPSVDALNSIRLYMRYQGRPHELETAKLALLNTRPAPSVAKILDYHCDDVCMAAYFPDKCKCGEPTKAEKRGS* # ORIGINAL: g668.t1 original gene structure, not modified by PASA NODE_360_length_26003_cov_46.1677 AUGUSTUS gene 17017 20095 . + . ID=g668;Name=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS mRNA 17017 20095 . + . ID=g668.t1;Parent=g668;Name=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 17017 17890 . + . ID=g668.t1.exon1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 17017 17890 . + 0 ID=cds.g668.t1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 18093 18272 . + . ID=g668.t1.exon2;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 18093 18272 . + 2 ID=cds.g668.t1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 18606 18770 . + . ID=g668.t1.exon3;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 18606 18770 . + 2 ID=cds.g668.t1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 19062 19170 . + . ID=g668.t1.exon4;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 19062 19170 . + 2 ID=cds.g668.t1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 19377 19593 . + . ID=g668.t1.exon5;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 19377 19593 . + 1 ID=cds.g668.t1;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 19862 20095 . + . ID=g668.t1.exon6;Parent=g668.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 19862 20095 . + 0 ID=cds.g668.t1;Parent=g668.t1 #PROT g668.t1 g668 MADIDAQGLVERLIPTDVAGRARVRAELRSASRNCTARGLVYGARWASELAASVDVPILQDDSKASNAARSASHTQNHDGILVPDNEEDDYLVAKSYFDLREFDRCAHHLRETQSPACTFLRYYASYLSAQRKREGEADQAEFLTAAPTQSEQEVRALKSIHTELSALESRGAVDGFHFYLHGLILRDLNLVGEARASFAEAARRTPHHWGAWAELCTLVDVRDADDGDGVDLGGEPHWMRVFYEAALALEHLRSDDAVTLYAALCEAFPRSTYLAAQCATAYYNMRGECDEFEQAEAIFSAVRERDPFRLDSLDMYSNILYVKDARPQLSSLAHSACGIDKFRSESCCIMGNYFSLIEDHAKAITCFQRALRLNRKYISAWTLMGHEYVEVKNAPAAIEAYRKAVEINPRDYRAWYGLGQTYEVMNMPFYALYYYRKASLLRPYDARMWCALAGTYEALDRKSDAIECYKRAEDSGDRDGIAIGKLAILSEEMGDVDAAATYHALVLDRCEEDRVETREAVAACMFLGKHHSDAGAYDDAEQFYSKVLNYNGVVSLPDLIESLLGVPGLRMHRLLLIPRNINMAFELTLQS* # ORIGINAL: g663.t1 original gene structure, not modified by PASA NODE_360_length_26003_cov_46.1677 AUGUSTUS gene 542 1203 . + . ID=g663;Name=g663.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS mRNA 542 1203 . + . ID=g663.t1;Parent=g663;Name=g663.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 542 733 . + . ID=g663.t1.exon1;Parent=g663.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 542 733 . + 0 ID=cds.g663.t1;Parent=g663.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 949 1203 . + . ID=g663.t1.exon2;Parent=g663.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 949 1203 . + 0 ID=cds.g663.t1;Parent=g663.t1 #PROT g663.t1 g663 MLRGAYWEGGSASPARSPSSQSTRFSSPAGMRRAEQAPAEYQMMDAVDAQHISRRTRDDPVQFDEREAAKEAITSVFPNAVVQSTRLDDYPIVVTIRSASFGVPLVIFSCSQRDLFRKYFTKRAATQQLIKRRLMQLLLDSDEGDPAS* # ORIGINAL: g664.t1 original gene structure, not modified by PASA NODE_360_length_26003_cov_46.1677 AUGUSTUS gene 1729 3744 . - . ID=g664;Name=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS mRNA 1729 3744 . - . ID=g664.t1;Parent=g664;Name=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 3496 3744 . - . ID=g664.t1.exon1;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 3496 3744 . - 0 ID=cds.g664.t1;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 3245 3379 . - . ID=g664.t1.exon2;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 3245 3379 . - 0 ID=cds.g664.t1;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 2918 3086 . - . ID=g664.t1.exon3;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 2918 3086 . - 0 ID=cds.g664.t1;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 2582 2690 . - . ID=g664.t1.exon4;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 2582 2690 . - 2 ID=cds.g664.t1;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS exon 1729 2329 . - . ID=g664.t1.exon5;Parent=g664.t1 NODE_360_length_26003_cov_46.1677 AUGUSTUS CDS 1729 2329 . - 1 ID=cds.g664.t1;Parent=g664.t1 #PROT g664.t1 g664 MASLARTALVPTILRSAVPWAGRSAVGHADSASARATAQRHVMCAGIARSYHNHSNAKKTTATSVTWDFRSDTVTRPTEGMYKAMMEAPVGDDVFGEDPTVVALEERVADLCGHERGLFCASGSMTNQLGLRAHLGALESVICDFRAHIFRYECGGVGYHSQAAVVPLKVDVPTGPKHLTAEDIEANIFPEDVHYAVTKGVSLENTYNGHVFPFEEIKRIRDLCDRKGLFLHVDGARLWNASIASGVSLREYGALFHSLSLCLSKGLGAPVGSILVGSAKFIERARHFRKLFGGGWRQAGILAAAGSYAIDHHWPRMAEDHANARVLADGLRSLGFVVMNRVDTNAVFARPGDAVGMSMAEIVAHMSAHGVLMSDRGANMTRMLVHHQTPRQAIDGTLALLADAIEAAAKRGQRTGGASA* # PASA_UPDATE: g666.t1_g667.t1, single gene model update, valid-1, status:[pasa:asmbl_6304,status:3], valid-1 NODE_360_length_26003_cov_46.1677 . gene 6820 16381 . - . ID=g666_g667;Name=MERGED%3A%20g666.t1 NODE_360_length_26003_cov_46.1677 . mRNA 6820 16381 . - . ID=g666.t1_g667.t1;Parent=g666_g667;Name=MERGED%3A%20g666.t1 NODE_360_length_26003_cov_46.1677 . five_prime_UTR 16039 16381 . - . ID=g666.t1_g667.t1.utr5p1;Parent=g666.t1_g667.t1 NODE_360_length_26003_cov_46.1677 . exon 12673 16381 . - . ID=g666.t1_g667.t1.exon1;Parent=g666.t1_g667.t1 NODE_360_length_26003_cov_46.1677 . CDS 12673 16038 . - 0 ID=cds.g666.t1_g667.t1;Parent=g666.t1_g667.t1 NODE_360_length_26003_cov_46.1677 . exon 6820 8202 . - . ID=g666.t1_g667.t1.exon2;Parent=g666.t1_g667.t1 NODE_360_length_26003_cov_46.1677 . CDS 7060 8202 . - 0 ID=cds.g666.t1_g667.t1;Parent=g666.t1_g667.t1 NODE_360_length_26003_cov_46.1677 . three_prime_UTR 6820 7059 . - . ID=g666.t1_g667.t1.utr3p1;Parent=g666.t1_g667.t1 #PROT g666.t1_g667.t1 g666_g667 MTRATAMREPMVDVKKPQRLPPLEDTSRATSPSSQARPSPMVATKLVAQPSPKPSHAQPAKGLVSNSNSSGSLRDVGGHGLVRKLSGNGLVGSRPPSARRVVLESLPVRPTSARIGAALVPAIPPLLTTSEEIAAAPENQNLSMNEVLLQKMKVNKQRYLRVFLSSTFRGMEGERECLTKKYFKELRHQCEQAGIFLTIVDLRWGITEHAASNAETLYICLREIDDSDIFLGFYGERYGWHQPEDGSQDVLLAKNFDKMAAHYPWTDQYRDRSATEVEFLHGHLNNPRARPSFFFFRDPAWDAQMLETVESEDEKIKYRAESESARAKLSALKECVRESKHAQVFDNYTDPEEGAKKMYTVLHELLSEIITKSGFTPDNETALHEAFMLSRAQVYVGGDAYMMVIDKHFAKPRPLPLVVVGEAGMGKSALLSNWIMRTFRSEIAPENECLVYHFMGSSEPSTRPGNVLRRLLIGVAVALGANGIQLPLDINELRDKVCELLAVAATRKMRVTFVLDGLDQLEDRDGASELRWLPDGSAWEGHRVIISVAAQGNSSVRRGSSIGANGMLNSSFNPVTGSLTPLHRRSSVALIKRLSESSEDVHGSIERRVLDAIDRRDWTARLEVRPWNKDDLAVFIRSVLRRAGKSLSETRKSADKPSQMETLLVAKQCNNPLYVSLLLEELVAFGDFSQLDGYIERCLKCHDAVQLFEHVLTQLETEHKMEGTNIVEDVLVCLALARFGLSEMELIDILGIEQSAWSPIFYARRNFFVKRSGLLGFFHKQLVIAVERRYLVKDDSKRDVLLRRMVNYFSNKMRTQEGALVEGRVVDELPWLLKALEDTEGMKTCLTNLSMFQQMFDREKYELFSYWRFVGADGAEIASVYRESLKLAEKDTSGMLYGLVGRFIQEYGFRLHALEFFEKELEISESEKGDRHPDVANALNNLAGIHSSNGQHERALPLYERALGIYENIYSEDHPDIASTLNNLAALYDEAGQYEDALPLYERSLAIYEKRFGKEHPDVATALNNIAGVYNMQELYDKALPLYERALEIYETNYGLEHPDVALALNNMAGIYDGQGLLDEAIPLYKRSLDIYEAKFGRDHPDVATALMNIAGVYNDMEAYDKALPLYERSLAIRKGKFGDEHPNVATALNNLAELYKAQALYDKAQSLYEQSLAIRESKFGDSHPSVATALNNLALLYSARGHSRKALPLFERALHIREAQYGMDHPDVAMSLNNLASLFRSQNNSSKAMPLYRRSLAIYEARFGPDHPTVATALNNIAELYSGEGQHDKAIPLYQRAAAIYESKFDENHPDLASTLNNLATTYDEQGQFEKAVPLYERALKIYEIKFGPDHPDVAMTLNNLAMLHEDRGDIDLAIKLYERSLAIRERNFGQEHPDVAESLHNLSTVLGTKKEWGRVTKLLERAIAIRRLRFGADHELTQASTDLYVEACTHERQGAGTATMTVKTRPKPVEDGTIDAAAISASGEILPIDVSVLHNVPPES* # ORIGINAL: g8620.t1 original gene structure, not modified by PASA NODE_649_length_19601_cov_43.4793 AUGUSTUS gene 5291 7001 . + . ID=g8620;Name=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS mRNA 5291 7001 . + . ID=g8620.t1;Parent=g8620;Name=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 5291 5447 . + . ID=g8620.t1.exon1;Parent=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 5291 5447 . + 0 ID=cds.g8620.t1;Parent=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 5550 5982 . + . ID=g8620.t1.exon2;Parent=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 5550 5982 . + 2 ID=cds.g8620.t1;Parent=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 6116 7001 . + . ID=g8620.t1.exon3;Parent=g8620.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 6116 7001 . + 1 ID=cds.g8620.t1;Parent=g8620.t1 #PROT g8620.t1 g8620 MANGKKQTTVATLAISKPNNPDGFCGGECVEGAVFLTEDAQIKSIVARFKGTEHAQWRKPSSSKTVDTKRRFLEIKIAVPFDKKQKTYPKGSTLPFAVKLPQYLPKSFGLDDYNNDKVSYMAELYYSLTVEIKLKKGFQKMKQYVAARPDDTTQSPTAPRTASGDYKCGICSHITATATLDKAWIRPGDVVTVTVDIANDSKTHEVTGVLVNALQTVEMIKSRWTKNDEVEGILQAMIPSASCKPKTKAHCTLDITWPSGVEQNPVHPAGFSARRTSAKHVTPAIVVEHSLRIRVLVAPASSKKAKTEDKSFVIEIPVTVFPYVEAKDSTASSFPATQAKSDVKSVESATDMSAGGDLSPEDKKRTWQKIGVQIVPTAAPKSGASPLVSPNSSLGRTAILRTVPKPEFMRALDDKRIQEEEEIRQLRQQRLDEEAKERQAEMDERRRQESEAAAALELSREKKRKALMAVNMHAHPRYATDISYAPTGCAC* # PASA_UPDATE: g8623.t1, single gene model update, valid-1, status:[pasa:asmbl_8681,status:12], valid-1 NODE_649_length_19601_cov_43.4793 . gene 18291 19506 . + . ID=g8623;Name=g8623.t1 NODE_649_length_19601_cov_43.4793 . mRNA 18291 19506 . + . ID=g8623.t1;Parent=g8623;Name=g8623.t1 NODE_649_length_19601_cov_43.4793 . five_prime_UTR 18291 18492 . + . ID=g8623.t1.utr5p1;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . exon 18291 18607 . + . ID=g8623.t1.exon1;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . CDS 18493 18607 . + 0 ID=cds.g8623.t1;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . exon 18872 19077 . + . ID=g8623.t1.exon2;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . CDS 18872 19077 . + 2 ID=cds.g8623.t1;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . exon 19242 19296 . + . ID=g8623.t1.exon3;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . CDS 19242 19296 . + 0 ID=cds.g8623.t1;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . exon 19487 19506 . + . ID=g8623.t1.exon4;Parent=g8623.t1 NODE_649_length_19601_cov_43.4793 . CDS 19487 19506 . + 2 ID=cds.g8623.t1;Parent=g8623.t1 #PROT g8623.t1 g8623 MSKGNKRAAANALDTVTESVNERIVRTVYELYTKDADEGLIRISSLVGKPLTAPRRKVNVVLIGNHSAGKSSFINWYVEDTVQRTGVAIETQGFTIVESGNKRDTLMGPATVHLFPIFQEISKVDVSKTLT* # ORIGINAL: g8619.t1 original gene structure, not modified by PASA NODE_649_length_19601_cov_43.4793 AUGUSTUS gene 119 1666 . - . ID=g8619;Name=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS mRNA 119 1666 . - . ID=g8619.t1;Parent=g8619;Name=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 1622 1666 . - . ID=g8619.t1.exon1;Parent=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 1622 1666 . - 0 ID=cds.g8619.t1;Parent=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 690 1347 . - . ID=g8619.t1.exon2;Parent=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 690 1347 . - 0 ID=cds.g8619.t1;Parent=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 119 438 . - . ID=g8619.t1.exon3;Parent=g8619.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 119 438 . - 2 ID=cds.g8619.t1;Parent=g8619.t1 #PROT g8619.t1 g8619 MKGYLAGNGQSLEYSYDPTEVSFRKGSFEHELQCPDASLLDNRSNRPLVCLLDALRRTVSNHLFEWREFEVIASPAAERYADSSMSSSTTDGSLSPSPTTARDAAANNDRRIAERVQRIKDSPSAMRRGIHGGGGTAGGKKNSPRTIWKRTHTHRESPYIVPLPTAPLSVVMEPPDYMSVEDELPVIALQDDGTERSLANIHISDIAMTGTFAVPSRKLPNVNHVWRVHGALQQGYRARAAMTARRILLAARLLAVFPYQLLSLRGFFSGPQDKKCYVQPLPVGVAKALQSIYNGVRTIADLLFGLSTSESWTLDEIETEFAGCRRKNVTSVLKTPPDDSG # ORIGINAL: g8622.t1 original gene structure, not modified by PASA NODE_649_length_19601_cov_43.4793 AUGUSTUS gene 11951 17623 . - . ID=g8622;Name=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS mRNA 11951 17623 . - . ID=g8622.t1;Parent=g8622;Name=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 17225 17623 . - . ID=g8622.t1.exon1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 17225 17623 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 16895 16981 . - . ID=g8622.t1.exon2;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 16895 16981 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 16149 16316 . - . ID=g8622.t1.exon3;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 16149 16316 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 15707 15901 . - . ID=g8622.t1.exon4;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 15707 15901 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 15459 15554 . - . ID=g8622.t1.exon5;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 15459 15554 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 14348 14551 . - . ID=g8622.t1.exon6;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 14348 14551 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 14068 14153 . - . ID=g8622.t1.exon7;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 14068 14153 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 13774 13819 . - . ID=g8622.t1.exon8;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 13774 13819 . - 1 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 13468 13564 . - . ID=g8622.t1.exon9;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 13468 13564 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 13168 13253 . - . ID=g8622.t1.exon10;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 13168 13253 . - 2 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 12288 12884 . - . ID=g8622.t1.exon11;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 12288 12884 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 11951 12124 . - . ID=g8622.t1.exon12;Parent=g8622.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 11951 12124 . - 0 ID=cds.g8622.t1;Parent=g8622.t1 #PROT g8622.t1 g8622 MLQGDDPPAYEHGSPAPIQPVAEGDCSAADCNAHLVPIKVDVTDSFSGDVDVPGSDQSGGVFRPPASDGVATPTLEDEVVLSAVTLLPTSPAEVDPANVQTNAHVGDEEQHRRVILSEALITLGIKLSDKQKKELLRVQAVFDEDSSDQKKRTVDFAWSYIATALSCIPTHATMISLGIACGALLVALPQIIILLVLAVFPALTKKLPWDIKKPKQKKKSREEIKAIATISAYVPRTESALWLNTILARVWSELHDTKINALFARLVNVEIDDLRKEIAGCFLGPMTLSGHEFGNCAPTFDKFAVLRESEEEELLMLFELSTFPESTLAFGFFEPPEMDIVVDARAMGQDAIHLKKVLPTAIRFALKKKLVLPNLKTNYLLMKEANSKFVFSGYLFKRSKPGGMIPSWKMRWFLLKPRALLYFSNHTEQKPISQYPVVWIERVQLVNIFPQYPHCLAVKVANIGVLYLAAQTEWEINDWLPALDKAAEAACNADAASNGNTRQSGPPLSPTNNSDYESDEDILEKLDAHIDSNAASASTTTTTTTTTTTTTANAARGHTRTVSHGGNRSASTATNSNSTPIRRGHQRNSSKTSIVSSVSSNNSKLGDPSATAASATSPKLTKATSASSIANGVVNGSGVPSSADDDKLAKERLRIIEKKIAEQKRSLSVMQKNFKGGDDVIDSIQEQEIASKERILQSLMSMRDAIIERLGTSESLTQTVHDGPSPTKKGRRPRAGSEGHVPRL* # ORIGINAL: g8621.t1 original gene structure, not modified by PASA NODE_649_length_19601_cov_43.4793 AUGUSTUS gene 7714 11139 . + . ID=g8621;Name=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS mRNA 7714 11139 . + . ID=g8621.t1;Parent=g8621;Name=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 7714 7818 . + . ID=g8621.t1.exon1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 7714 7818 . + 0 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 8025 8101 . + . ID=g8621.t1.exon2;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 8025 8101 . + 0 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 8254 8364 . + . ID=g8621.t1.exon3;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 8254 8364 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 8482 8540 . + . ID=g8621.t1.exon4;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 8482 8540 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 8752 8848 . + . ID=g8621.t1.exon5;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 8752 8848 . + 2 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 9069 9147 . + . ID=g8621.t1.exon6;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 9069 9147 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 9411 9468 . + . ID=g8621.t1.exon7;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 9411 9468 . + 0 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 9703 9796 . + . ID=g8621.t1.exon8;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 9703 9796 . + 2 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 9974 10030 . + . ID=g8621.t1.exon9;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 9974 10030 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 10257 10320 . + . ID=g8621.t1.exon10;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 10257 10320 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 10492 10556 . + . ID=g8621.t1.exon11;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 10492 10556 . + 0 ID=cds.g8621.t1;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS exon 10947 11139 . + . ID=g8621.t1.exon12;Parent=g8621.t1 NODE_649_length_19601_cov_43.4793 AUGUSTUS CDS 10947 11139 . + 1 ID=cds.g8621.t1;Parent=g8621.t1 #PROT g8621.t1 g8621 MSTAPTSKMQYNTLGRSGLKVSQVSYGAWVSFKSQVDLNKAYELMKVAYDNGINFFDNAEGYADGEAETIMGDSIKRGIAEGAWIRSDLVITTKIFFGYRTKRGVNDKGLSRKHIVEGTLASLKRLQLDYVDVIFCHRPDPLTPIEETVRAMNHVIERGLAFYWGTSEWNSQQITEACAIAQRLNLIAPIVEQPQYNIFERNRVEFEYLPLYRNNGLGLTTWSPLASGILTGKYSNMNIPEGSRLSLPEYKWLKDRKFGGQADQVDLADKLAPIAKELGCTLAQMSIAWCLKNKAVSTVILGATSVEQLTENLKSLDVVEKLTPEILKRIDDVAGTKPVPDGITLQVTGLRN* # PASA_UPDATE: g8771.t1, single gene model update, valid-1, status:[pasa:asmbl_7505,status:12],[pasa:asmbl_7508,status:12], valid-1 NODE_465_length_23228_cov_50.9799 . gene 19579 21530 . + . ID=g8771;Name=g8771.t1 NODE_465_length_23228_cov_50.9799 . mRNA 19579 21530 . + . ID=g8771.t1;Parent=g8771;Name=g8771.t1 NODE_465_length_23228_cov_50.9799 . five_prime_UTR 19579 19664 . + . ID=g8771.t1.utr5p1;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . exon 19579 19822 . + . ID=g8771.t1.exon1;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . CDS 19665 19822 . + 0 ID=cds.g8771.t1;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . exon 19951 20092 . + . ID=g8771.t1.exon2;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . CDS 19951 20092 . + 1 ID=cds.g8771.t1;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . exon 20362 21530 . + . ID=g8771.t1.exon3;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . CDS 20362 21396 . + 0 ID=cds.g8771.t1;Parent=g8771.t1 NODE_465_length_23228_cov_50.9799 . three_prime_UTR 21397 21530 . + . ID=g8771.t1.utr3p1;Parent=g8771.t1 #PROT g8771.t1 g8771 MLSSLWGFVKRHRRKFLAIGVIAGGAYVAGRYVKSRFEEERDKATAELLANARMRHHFESNQRTCDATVQSLLASLREELYTYLDVESLTGQLRLRQGDKVQIWESLKVVSFARTITGVYAVCILTVFLRVQLNVVGRYMYLDTLQRAQARTHPTDASGAGDAGSASSYLTPEVQRQYLTFVQFFLREGLADLCAIVRGASEGILDQMSLKELVSAESLSRVVDAIRARVEGTSGEGYGAFVVCMLPQTEEGIASVLALAEEPSSSRRRREERDERGGDGFGADGDSRGSTPSPPRGQPRSIAASFEMVSGGSSGNSGSREADDVFVNPSLRLLLDETGEILSSPDFADTLGACLDKAFSVLVGNILPFFVSDVGPADRTRGATPSPSQSTLLPLAKIIPLVNGQCHPLFSVPNNAFVDALSRLVQLEEFSAAVYSATADGDEA* # PASA_UPDATE: g8772.t1, single gene model update, valid-1, status:[pasa:asmbl_7506,status:12], valid-1 NODE_465_length_23228_cov_50.9799 . gene 22360 23097 . + . ID=g8772;Name=g8772.t1 NODE_465_length_23228_cov_50.9799 . mRNA 22360 23097 . + . ID=g8772.t1;Parent=g8772;Name=g8772.t1 NODE_465_length_23228_cov_50.9799 . five_prime_UTR 22360 22418 . + . ID=g8772.t1.utr5p1;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . exon 22360 22565 . + . ID=g8772.t1.exon1;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . CDS 22419 22565 . + 0 ID=cds.g8772.t1;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . exon 22702 22743 . + . ID=g8772.t1.exon2;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . CDS 22702 22743 . + 0 ID=cds.g8772.t1;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . exon 22963 23097 . + . ID=g8772.t1.exon3;Parent=g8772.t1 NODE_465_length_23228_cov_50.9799 . CDS 22963 23097 . + 0 ID=cds.g8772.t1;Parent=g8772.t1;3_prime_partial=true #PROT g8772.t1 g8772 MDARVVAVTAFVIATAIAVVSGCGITTHIEVGHRAIEYFGSSQYGNYKEYMQKHQDAFQAGNPYPDAMYNGMCQKGAYHSLAEDSHWAGFMNATATYIRRKYPKPWGE # PASA_UPDATE: g8770.t1, single gene model update, valid-1, status:[pasa:asmbl_7507,status:3], valid-1 NODE_465_length_23228_cov_50.9799 . gene 17238 19159 . - . ID=g8770;Name=g8770.t1 NODE_465_length_23228_cov_50.9799 . mRNA 17238 19159 . - . ID=g8770.t1;Parent=g8770;Name=g8770.t1 NODE_465_length_23228_cov_50.9799 . five_prime_UTR 19027 19159 . - . ID=g8770.t1.utr5p1;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . exon 18869 19159 . - . ID=g8770.t1.exon1;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . CDS 18869 19026 . - 0 ID=cds.g8770.t1;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . exon 18534 18570 . - . ID=g8770.t1.exon2;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . CDS 18534 18570 . - 1 ID=cds.g8770.t1;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . exon 17238 18423 . - . ID=g8770.t1.exon3;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . CDS 17506 18423 . - 0 ID=cds.g8770.t1;Parent=g8770.t1 NODE_465_length_23228_cov_50.9799 . three_prime_UTR 17238 17505 . - . ID=g8770.t1.utr3p1;Parent=g8770.t1 #PROT g8770.t1 g8770 MPGLDFSLEPGIFTLAAGFFIAVFTLFAAAFVITGTSPFAKAEGNKHKHRGSRSTKDVAEQPITPVKVSTKQAPAAAKPVKAQPAPQKPVKAEAPKPIQANESKAKPAKADAPAPKPAVAVDSKVKPAKVDAPAPTPVQAKDDKTKPVKVEESKAKPAVKDAATAKGKKEAKTAKKAASGQSGQSGQSTQASNGYLALHDSGFEVWEEHGYVEDWNVAVSRKTKAKFSKMAAEKADVLDGFSRAHAHHIDHTLEEAAGDAGDDAPRIPTATFEEDTRRFDAPSFFSVLSEEGAATPSDDKKAIASTKKAKTEKSAPKVKHVEVHPKPVLIVHDDDAPLDPNVPIVHPPHVRRSVSFNERIKTISIPQPEE* # ORIGINAL: g8768.t1 original gene structure, not modified by PASA NODE_465_length_23228_cov_50.9799 AUGUSTUS gene 12744 13640 . - . ID=g8768;Name=g8768.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS mRNA 12744 13640 . - . ID=g8768.t1;Parent=g8768;Name=g8768.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 12744 13640 . - . ID=g8768.t1.exon1;Parent=g8768.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 12744 13640 . - 0 ID=cds.g8768.t1;Parent=g8768.t1 #PROT g8768.t1 g8768 MAHVTLARALSSVIPSRATDSVVAFSENSEIPEISLGDGKSPAANTDGEGTDNTAHNTTRDGEEDAASTSLAVEMGLEGAPIPPASSLRSIVWRTFEYPGSSRLATCVAVYTALLIVLSTVAFCLESIVSLSTTPSQKDSWFIVESFIAGNFTIEIIIRFWACPHRSRFLYTFFNIIDIISTVPYYIDLISAGGEGVGGLGVLRIVRLVRALRMFKLGKHSQQFRLVMVAISRSKEGIYMLVFTMMMAMVFFGSCMYFAETAACTLNSDGVWIYNTGPMKGQETTYQSAVHSMWWAIA* # ORIGINAL: g8764.t1 original gene structure, not modified by PASA NODE_465_length_23228_cov_50.9799 AUGUSTUS gene 241 1870 . - . ID=g8764;Name=g8764.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS mRNA 241 1870 . - . ID=g8764.t1;Parent=g8764;Name=g8764.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 1013 1870 . - . ID=g8764.t1.exon1;Parent=g8764.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 1013 1870 . - 0 ID=cds.g8764.t1;Parent=g8764.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 241 535 . - . ID=g8764.t1.exon2;Parent=g8764.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 241 535 . - 0 ID=cds.g8764.t1;Parent=g8764.t1 #PROT g8764.t1 g8764 MFIPACTATNLLIDPSLPLCDNTAFSVSAVASDGTLAFACFHFDVPSHSPQIFNFALTLRSSDYLPIASTVFSSSSINYAVTFNVAIDSAGVVYSVLPVGAVTQYILTLYTLTPVPGSTVGLGGSLELTRSATSNSVTDARVAAGPRDIVVSYLVNNGLYMCRVPIGPLGTPRCGITIAASASQPDRTTLHYDGSVAWITFADASRVPYIATVYANDFVSIVKVGFPTGKALASSFQWDAKRLAGGHFMMVWQWTDFLQRTLVDIARVLPNGTVVVNVPVTSTLFTGDAMIALSNDESVAYVAYVTTPSSNFVLGKVNVDVAIRRFDVGTLSPIDTTPLSIFNEMSSSMPSGLQPMISLAASPSTPSKAVCTFKGERAVGIFLS # ORIGINAL: g8767.t1 original gene structure, not modified by PASA NODE_465_length_23228_cov_50.9799 AUGUSTUS gene 11499 12404 . - . ID=g8767;Name=g8767.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS mRNA 11499 12404 . - . ID=g8767.t1;Parent=g8767;Name=g8767.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 11499 12404 . - . ID=g8767.t1.exon1;Parent=g8767.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 11499 12404 . - 0 ID=cds.g8767.t1;Parent=g8767.t1 #PROT g8767.t1 g8767 MTTVGYGDSVPTTAQGKLVAGLTMIAGLLVVAFPITIIGANLGEVYEELRAERARKARAEERETRHKLATSTAVDARSVSTLFATLQRYSDEVHVELVHVRNNMAKIEGLHEAMAASLKTAPSLQKLLLMTVKRPSAASIALGGLGSGDVNQKSIANLYSAVRESVRGSNLNLYDNSGGGATGVNVSGGVNVGDGVNVNGPADANSNTSGASARSSASQSADHSAQVSVSRPSLRRSWTDAALAVRLLGELPDSDRASEASMSLTDVRPRNTPAPGSGSGNRRDSEDVASVTVNIPSDTID* # PASA_UPDATE: g8769.t1, single gene model update, valid-1, status:[pasa:asmbl_7504,status:3], valid-1 NODE_465_length_23228_cov_50.9799 . gene 14935 16740 . + . ID=g8769;Name=g8769.t1 NODE_465_length_23228_cov_50.9799 . mRNA 14935 16740 . + . ID=g8769.t1;Parent=g8769;Name=g8769.t1 NODE_465_length_23228_cov_50.9799 . five_prime_UTR 14935 15040 . + . ID=g8769.t1.utr5p1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . exon 14935 15045 . + . ID=g8769.t1.exon1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . CDS 15041 15045 . + 0 ID=cds.g8769.t1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . exon 15227 15488 . + . ID=g8769.t1.exon2;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . CDS 15227 15488 . + 1 ID=cds.g8769.t1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . exon 15798 15925 . + . ID=g8769.t1.exon3;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . CDS 15798 15925 . + 0 ID=cds.g8769.t1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . exon 16254 16740 . + . ID=g8769.t1.exon4;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . CDS 16254 16323 . + 1 ID=cds.g8769.t1;Parent=g8769.t1 NODE_465_length_23228_cov_50.9799 . three_prime_UTR 16324 16740 . + . ID=g8769.t1.utr3p1;Parent=g8769.t1 #PROT g8769.t1 g8769 MSAPFTVMVAVDGSEYSDRAVDFGLDLCLRMEGARQLYVLHAVPLNPPSTFPGMDKVEKSYNIEAKNAAQELKEKYARRLHARVGHQDSLRADMLMMQSDSKQVIDLIAEAVAERRPDMFVIGTRGLTGLKKMVMGSVTEQCIRTLTCPVTVVK* # ORIGINAL: g8765.t1 original gene structure, not modified by PASA NODE_465_length_23228_cov_50.9799 AUGUSTUS gene 4777 7098 . - . ID=g8765;Name=g8765.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS mRNA 4777 7098 . - . ID=g8765.t1;Parent=g8765;Name=g8765.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 4777 7098 . - . ID=g8765.t1.exon1;Parent=g8765.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 4777 7098 . - 0 ID=cds.g8765.t1;Parent=g8765.t1 #PROT g8765.t1 g8765 MSVQVSKFRVIFIAFSFVSCTLLAFEFGRSTAAGGANGSGNLFIIPSDGPAVKYGAEGRTNPTFGPNNPLGVHDRATVDHTHGGTVEGSSPDSPAIVTENNAPFRYKGQAASDETVNVGAGAGVPEDKIPATTRAQPSPVAGLKNVGKEVAIGADTAKSVDRKKIPSNARAQPSKPAPTPVKGVGKTGSGVVIIDSVSRVKQIPRASPTTTAPVVVVKDQSVGGKVASGVDAAKSIDRKKIPSTTRAPPSKPAPIVPSVADGTSDEAGFDLADTIDLSRVEVDAVDAEKKSSTTSEPPPSKAAPDAVKVDKAGSSGGGVRGGVESGAPEKQRSPIAPGTAEEYSNGVVDGSTVVQLNETSNAPVDVVDSETPNAPVDGVDSETPNAPVDGVDSETPNAPVDGVDSETPNAPVDGVDNAVPLPLPEYDPPHSLQPDCGVVSPSVKTVLMYSNPWGSVPCMSFANCPVSNCVMVWSRRYTETADAVIFWQHFDPQSIPPRHPDQVWVMFELEVPRPSRYPLVAMEIDRPFSHLRYNWTMTFNLESDVPTHYESFGDRLHMPRMLGPFPRKIARVLFMAMNCGSDSGRESYVQDLMQYVDVHSYGSCLHNKDYLNVDGRFVYPPGRGEYLATASYDFIGMYEFYLAFENEIGVPDYSTEKLWKAYRAGAVPIVLGRLPNPAYAPTPQAVIQTDDFRDAAHLGNYLNSCHSGTQCYKRRMAWRELPEKKLNPLFLALESTGTCELCRKLNAPIARKSYDNAYKWFWEVSYGPNRRPL* # ORIGINAL: g8766.t1 original gene structure, not modified by PASA NODE_465_length_23228_cov_50.9799 AUGUSTUS gene 7883 10051 . - . ID=g8766;Name=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS mRNA 7883 10051 . - . ID=g8766.t1;Parent=g8766;Name=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 10042 10051 . - . ID=g8766.t1.exon1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 10042 10051 . - 0 ID=cds.g8766.t1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 9461 9591 . - . ID=g8766.t1.exon2;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 9461 9591 . - 2 ID=cds.g8766.t1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 9148 9237 . - . ID=g8766.t1.exon3;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 9148 9237 . - 0 ID=cds.g8766.t1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 8727 8833 . - . ID=g8766.t1.exon4;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 8727 8833 . - 0 ID=cds.g8766.t1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 8334 8486 . - . ID=g8766.t1.exon5;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 8334 8486 . - 1 ID=cds.g8766.t1;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS exon 7883 8003 . - . ID=g8766.t1.exon6;Parent=g8766.t1 NODE_465_length_23228_cov_50.9799 AUGUSTUS CDS 7883 8003 . - 1 ID=cds.g8766.t1;Parent=g8766.t1 #PROT g8766.t1 g8766 MCAASWDAAWVAGVTPWVTSKAAPSLADVIARDAIPRGAVLVPGCGTAPDVFALAASGTRKVVGLDFSDVAIAKAEEIKAKGSMTGSENVSFVCGDFFTYDPGHKFDFIFDYTFLCSFPPGELRLKWAQKMRDLIVPVTGELFTLIFPIGDHKGGPPYAMSLEGVRQLLEPVGFRSFVLEPTELSLKGRVGAEAVGRWRLDAK* # PASA_UPDATE: g10208.t1, single gene model update, valid-1, status:[pasa:asmbl_4522,status:12], valid-1 NODE_2541_length_5971_cov_42.0819 . gene 3330 4539 . + . ID=g10208;Name=g10208.t1 NODE_2541_length_5971_cov_42.0819 . mRNA 3330 4539 . + . ID=g10208.t1;Parent=g10208;Name=g10208.t1 NODE_2541_length_5971_cov_42.0819 . five_prime_UTR 3330 3387 . + . ID=g10208.t1.utr5p1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . exon 3330 3482 . + . ID=g10208.t1.exon1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . CDS 3388 3482 . + 0 ID=cds.g10208.t1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . exon 3718 3765 . + . ID=g10208.t1.exon2;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . CDS 3718 3765 . + 1 ID=cds.g10208.t1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . exon 3895 4016 . + . ID=g10208.t1.exon3;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . CDS 3895 3979 . + 1 ID=cds.g10208.t1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . exon 4391 4539 . + . ID=g10208.t1.exon4;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . three_prime_UTR 3980 4016 . + . ID=g10208.t1.utr3p1;Parent=g10208.t1 NODE_2541_length_5971_cov_42.0819 . three_prime_UTR 4391 4539 . + . ID=g10208.t1.utr3p2;Parent=g10208.t1 #PROT g10208.t1 g10208 MGSGNVIIGFTIFWAVIGAIGPLVTPKGPNRGVIQTMIILTAICCWLFWLCTYLAQIHPLIGPEIKCNTVDLCSE* # PASA_UPDATE: g10207.t1, single gene model update, valid-1, status:[pasa:asmbl_4524,status:3], valid-1 NODE_2541_length_5971_cov_42.0819 . gene 1101 2912 . - . ID=g10207;Name=g10207.t1 NODE_2541_length_5971_cov_42.0819 . mRNA 1101 2912 . - . ID=g10207.t1;Parent=g10207;Name=g10207.t1 NODE_2541_length_5971_cov_42.0819 . five_prime_UTR 2726 2912 . - . ID=g10207.t1.utr5p1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . exon 2662 2912 . - . ID=g10207.t1.exon1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . CDS 2662 2725 . - 0 ID=cds.g10207.t1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . exon 2051 2565 . - . ID=g10207.t1.exon2;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . CDS 2051 2565 . - 2 ID=cds.g10207.t1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . exon 1827 1961 . - . ID=g10207.t1.exon3;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . CDS 1827 1961 . - 0 ID=cds.g10207.t1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . exon 1101 1331 . - . ID=g10207.t1.exon4;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . CDS 1185 1331 . - 0 ID=cds.g10207.t1;Parent=g10207.t1 NODE_2541_length_5971_cov_42.0819 . three_prime_UTR 1101 1184 . - . ID=g10207.t1.utr3p1;Parent=g10207.t1 #PROT g10207.t1 g10207 MAAVSLSQRLCLFPLVRRAVEGAGFGRALVAAPCRSYAKQAKKIVVDVSLQPPPPGSPPLGHPWRLVSAVCIERIPLLTRLPSAFEREHEEFSDQIRYEKSKLSIPEIAELERTGTVTYTKPTIVTDPRLPGYDANRLFQPAARVVDPAIEADLHSLERQQTETLYLIVKRNRDAHQWQMPQASRKDTESMRQAAERALVDVAGVHLKGYFLSNAPSAFLSYPYPAGYKPADGTTGAKVFFFRAQFLKGNAIVPEKIGSDFAWVTRNEMTTYVAPDYFESVKPLLR* # PASA_UPDATE: g10206.t1, single gene model update, valid-1, status:[pasa:asmbl_4521,status:12], valid-1 NODE_2541_length_5971_cov_42.0819 . gene 4 1120 . + . ID=g10206;Name=g10206.t1 NODE_2541_length_5971_cov_42.0819 . mRNA 4 1120 . + . ID=g10206.t1;Parent=g10206;Name=g10206.t1 NODE_2541_length_5971_cov_42.0819 . five_prime_UTR 4 214 . + . ID=g10206.t1.utr5p1;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . exon 4 313 . + . ID=g10206.t1.exon1;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . CDS 215 313 . + 0 ID=cds.g10206.t1;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . exon 423 524 . + . ID=g10206.t1.exon2;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . CDS 423 524 . + 0 ID=cds.g10206.t1;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . exon 633 1120 . + . ID=g10206.t1.exon3;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . CDS 633 857 . + 0 ID=cds.g10206.t1;Parent=g10206.t1 NODE_2541_length_5971_cov_42.0819 . three_prime_UTR 858 1120 . + . ID=g10206.t1.utr3p1;Parent=g10206.t1 #PROT g10206.t1 g10206 MIAADGCCISLVSFVSCAFCRVILSDVTVEKSTGEKETHESYCISARRIRFVDIPDSVNVIATIQSRLSRTESMRQAGVRRKRKAPSLAAPGKRRATETGDHAHASTADVHGTHAHTLASPAARDPPLTPSCAPAEHTANG* # PASA_UPDATE: g10209.t1, single gene model update, valid-1, status:[pasa:asmbl_4523,status:12], valid-1 NODE_2541_length_5971_cov_42.0819 . gene 4969 5828 . + . ID=g10209;Name=g10209.t1 NODE_2541_length_5971_cov_42.0819 . mRNA 4969 5828 . + . ID=g10209.t1;Parent=g10209;Name=g10209.t1 NODE_2541_length_5971_cov_42.0819 . five_prime_UTR 4969 5138 . + . ID=g10209.t1.utr5p1;Parent=g10209.t1 NODE_2541_length_5971_cov_42.0819 . exon 4969 5364 . + . ID=g10209.t1.exon1;Parent=g10209.t1 NODE_2541_length_5971_cov_42.0819 . CDS 5139 5364 . + 0 ID=cds.g10209.t1;Parent=g10209.t1 NODE_2541_length_5971_cov_42.0819 . exon 5619 5828 . + . ID=g10209.t1.exon2;Parent=g10209.t1 NODE_2541_length_5971_cov_42.0819 . CDS 5619 5828 . + 2 ID=cds.g10209.t1;Parent=g10209.t1;3_prime_partial=true #PROT g10209.t1 g10209 MEDLIPMINKLQDVFNTVGADMIHLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLVLQLVNVSMSQNDARGYEEWGEFLHCPDRVFTNFADIRREIEDETERLTGKNKGVSSVAINLKVYSPHVLNLTLVDLPGITK # ORIGINAL: g118.t1 original gene structure, not modified by PASA NODE_2642_length_5563_cov_46.5694 AUGUSTUS gene 2045 5471 . - . ID=g118;Name=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS mRNA 2045 5471 . - . ID=g118.t1;Parent=g118;Name=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS exon 5469 5471 . - . ID=g118.t1.exon1;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS CDS 5469 5471 . - 0 ID=cds.g118.t1;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS exon 4818 5341 . - . ID=g118.t1.exon2;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS CDS 4818 5341 . - 0 ID=cds.g118.t1;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS exon 3645 4600 . - . ID=g118.t1.exon3;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS CDS 3645 4600 . - 1 ID=cds.g118.t1;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS exon 3392 3454 . - . ID=g118.t1.exon4;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS CDS 3392 3454 . - 2 ID=cds.g118.t1;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS exon 2045 3189 . - . ID=g118.t1.exon5;Parent=g118.t1 NODE_2642_length_5563_cov_46.5694 AUGUSTUS CDS 2045 3189 . - 2 ID=cds.g118.t1;Parent=g118.t1 #PROT g118.t1 g118 MARARSEESRSTDRLLPGGSARSKRRGRDEEEPDAEDDSDDEDARSGFDSQLEHKSVLQGKLERLTTVIGRIGIAMAVLTFVALCARFSIETFAIRHEHWKREYISRFLDFFITAITVLVVAIPEGLPLAVTLALAFSVRRMLSDNNLVRHLDACETMGSATSICSDKTGTLTTNRMAVVRMWAGRCDRMPPESLALDNVAAPLTALLCNGISVNSTAEVGDGEGRGGSGRIHTGSKTECALLELATSMGFPYRRERDRASVVRMLTFSSMRKRMSVAVRLADGGAVLHTKGASEIVLALCTSVMEPDGSQRALGDDDRSAICEGIIGRYAREGLRTIALACRLYPRGSVDWSRAEPDAVEQDMCLLAVVGIEDPVRAEVPAAIQQCKDAGITVRMVTGDNVSTATAIARKCGILDAGIDPEAVRLIGVVMEGPEFRRRVLDEEGEIVMTEFDKVWPHLRVLARSSPQDKYVLVEGIIRSNLNGRAREVVAVTGDGTNDAPALMRADVGFAMGISGTEVAKEASDIVILDDNFSSIVRAAMWGRNVYDSIAKFLQFQCTVNVSANLTAFIGAVVLEESPLTAVQMLWVNLIMDSLASLALATEPPTEDLLKRKPYGRTKPIISRIMMRNIVAQAIYQLAVTLSLVFVGDRLLGIASGRGTATGRDKMPTTHYTIVFNSFVLMQLFNQINARKIHGERNVFSGFMRNRLFVAILILEAIAQALIVEFGGRVFATRPLSPLHWAVCVGIGAGGIVWQFIVGVILPAHRLPKGMGTFRKPRSPDEPLPTHARLLWMRGLRRLRTELHVVHAFKELSTEHAAARRALLRWRKEAARSHSNSHATVATPPEGAGERSGDTITAVRTVGAQSGSRGPMSRLSSTQEYLARASPRPNERPSRL* # PASA_UPDATE: g117.t1, single gene model update, valid-1, status:[pasa:asmbl_4707,status:12], valid-1 NODE_2642_length_5563_cov_46.5694 . gene 332 1688 . + . ID=g117;Name=g117.t1 NODE_2642_length_5563_cov_46.5694 . mRNA 332 1688 . + . ID=g117.t1;Parent=g117;Name=g117.t1 NODE_2642_length_5563_cov_46.5694 . five_prime_UTR 332 333 . + . ID=g117.t1.utr5p1;Parent=g117.t1 NODE_2642_length_5563_cov_46.5694 . exon 332 469 . + . ID=g117.t1.exon1;Parent=g117.t1 NODE_2642_length_5563_cov_46.5694 . CDS 334 469 . + 0 ID=cds.g117.t1;Parent=g117.t1;5_prime_partial=true NODE_2642_length_5563_cov_46.5694 . exon 813 1688 . + . ID=g117.t1.exon2;Parent=g117.t1 NODE_2642_length_5563_cov_46.5694 . CDS 813 1531 . + 2 ID=cds.g117.t1;Parent=g117.t1 NODE_2642_length_5563_cov_46.5694 . three_prime_UTR 1532 1688 . + . ID=g117.t1.utr3p1;Parent=g117.t1 #PROT g117.t1 g117 CNCGSQGKCNDTIVGDGTCHCNAGWNTTAAACDACSDRHATAVCSDGFDGIDCENAMSSGTSTAASSNAKKSSGGTNPLYYAIPAALAGVVAIALIAFFVHKKNKKSKMRKSRSDLHHIFGGTEEPAGAVGVSYMNPVHRGSEIFTKQDFSGVASSGQEGHYDRISAYATTSNLRGADDPLYDSLALKPVGASAAAGAAASHYASPPSANAGAAASHYASPPSANAGATDEEGNYAYSTLGKLTDRLVYARLEFGDTPSSASSAANTAPNSRPETTMYDTVRPR* # ORIGINAL: g10148.t1 original gene structure, not modified by PASA NODE_2724_length_5325_cov_39.8248 AUGUSTUS gene 1826 4200 . + . ID=g10148;Name=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS mRNA 1826 4200 . + . ID=g10148.t1;Parent=g10148;Name=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 1826 2189 . + . ID=g10148.t1.exon1;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 1826 2189 . + 0 ID=cds.g10148.t1;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 2482 2516 . + . ID=g10148.t1.exon2;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 2482 2516 . + 2 ID=cds.g10148.t1;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 2880 2990 . + . ID=g10148.t1.exon3;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 2880 2990 . + 0 ID=cds.g10148.t1;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 3274 3455 . + . ID=g10148.t1.exon4;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 3274 3455 . + 0 ID=cds.g10148.t1;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 4038 4200 . + . ID=g10148.t1.exon5;Parent=g10148.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 4038 4200 . + 1 ID=cds.g10148.t1;Parent=g10148.t1 #PROT g10148.t1 g10148 MEASYVDFNDGTQPPGGQQFGFYGTDYSNTMPPDTSVAPPSAYSYGPPPAFNGGFNAPVPPYATTAMHGGAYGAPAYDNGGGFMRTDFGSDPSGTIEASGKGGAYGVQGSTGYDEEPPILEELGINFEHIMQKTMSVLHPLKQMDKNIMDDTDLAGPLLFCLMFGGFLLLTGKVHFGYIYGIGVLGCLAMYSILNLMSERGVSAGVTVSVMGYCLLPMVLLSVVGVLLSLHGFVGLILTTMSIVWCTHSAAKMFVSVLDMHQQLLLVGYPCLLVYGVFALLTVF* # ORIGINAL: g10147.t1 original gene structure, not modified by PASA NODE_2724_length_5325_cov_39.8248 AUGUSTUS gene 160 985 . - . ID=g10147;Name=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS mRNA 160 985 . - . ID=g10147.t1;Parent=g10147;Name=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 911 985 . - . ID=g10147.t1.exon1;Parent=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 911 985 . - 0 ID=cds.g10147.t1;Parent=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 604 652 . - . ID=g10147.t1.exon2;Parent=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 604 652 . - 0 ID=cds.g10147.t1;Parent=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS exon 160 306 . - . ID=g10147.t1.exon3;Parent=g10147.t1 NODE_2724_length_5325_cov_39.8248 AUGUSTUS CDS 160 306 . - 2 ID=cds.g10147.t1;Parent=g10147.t1 #PROT g10147.t1 g10147 MAALRPDDIEVVVPVPRAGAASASTDTGTSVPFALDSHDVAERLGTDAAAPTYGQYLRKRTITVTTDDGDAADITHDEKKSNKYADFTTI # PASA_UPDATE: g10278.t1, single gene model update, valid-1, status:[pasa:asmbl_285,status:12], valid-1 NODE_1075_length_14171_cov_42.4786 . gene 1 328 . - . ID=g10278;Name=g10278.t1 NODE_1075_length_14171_cov_42.4786 . mRNA 1 328 . - . ID=g10278.t1;Parent=g10278;Name=g10278.t1 NODE_1075_length_14171_cov_42.4786 . five_prime_UTR 214 328 . - . ID=g10278.t1.utr5p1;Parent=g10278.t1 NODE_1075_length_14171_cov_42.4786 . exon 1 328 . - . ID=g10278.t1.exon1;Parent=g10278.t1 NODE_1075_length_14171_cov_42.4786 . CDS 1 213 . - 0 ID=cds.g10278.t1;Parent=g10278.t1;3_prime_partial=true #PROT g10278.t1 g10278 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL # PASA_UPDATE: g10283.t1, single gene model update, valid-1, status:[pasa:asmbl_286,status:12], valid-1 NODE_1075_length_14171_cov_42.4786 . gene 11875 13882 . + . ID=g10283;Name=g10283.t1 NODE_1075_length_14171_cov_42.4786 . mRNA 11875 13882 . + . ID=g10283.t1;Parent=g10283;Name=g10283.t1 NODE_1075_length_14171_cov_42.4786 . five_prime_UTR 11875 11913 . + . ID=g10283.t1.utr5p1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 11875 11953 . + . ID=g10283.t1.exon1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 11914 11953 . + 0 ID=cds.g10283.t1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 12213 12319 . + . ID=g10283.t1.exon2;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 12213 12319 . + 2 ID=cds.g10283.t1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 12518 12634 . + . ID=g10283.t1.exon3;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 12518 12634 . + 0 ID=cds.g10283.t1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 12854 12997 . + . ID=g10283.t1.exon4;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 12854 12997 . + 0 ID=cds.g10283.t1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 13359 13485 . + . ID=g10283.t1.exon5;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 13359 13485 . + 0 ID=cds.g10283.t1;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . exon 13701 13882 . + . ID=g10283.t1.exon6;Parent=g10283.t1 NODE_1075_length_14171_cov_42.4786 . CDS 13701 13882 . + 2 ID=cds.g10283.t1;Parent=g10283.t1 #PROT g10283.t1 g10283 MLCSAVLRRAAASAVRVPVRNSSTYAETRKNLLINKNTKVICQGFTGKQGTFHSEQAIKYGTKLVGGVSPGKGGSTHLGLPVFNSVAEAVKATGATASMIYVPPAGAAKAIHEAIDAEIPLAVAITEGIPQQDMVKVKYRLVRQNKTRLIGPNCPGIIKPDACKIGIMPGHIHKAGKIGIVSRSGTLTYEAVAQTTAAGLGQTLCVGIGGDPFNGTDFVDCLDIFLKDDETQGALHSR* # PASA_UPDATE: g10280.t1, single gene model update, valid-1, status:[pasa:asmbl_283,status:3], valid-1 NODE_1075_length_14171_cov_42.4786 . gene 2925 7248 . - . ID=g10280;Name=g10280.t1 NODE_1075_length_14171_cov_42.4786 . mRNA 2925 7248 . - . ID=g10280.t1;Parent=g10280;Name=g10280.t1 NODE_1075_length_14171_cov_42.4786 . five_prime_UTR 6926 7248 . - . ID=g10280.t1.utr5p1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . exon 5002 7248 . - . ID=g10280.t1.exon1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . CDS 5002 6925 . - 0 ID=cds.g10280.t1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . exon 4604 4653 . - . ID=g10280.t1.exon2;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . CDS 4604 4653 . - 2 ID=cds.g10280.t1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . exon 4158 4284 . - . ID=g10280.t1.exon3;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . CDS 4158 4284 . - 0 ID=cds.g10280.t1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . exon 3450 3981 . - . ID=g10280.t1.exon4;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . CDS 3450 3981 . - 2 ID=cds.g10280.t1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . exon 2925 3207 . - . ID=g10280.t1.exon5;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . CDS 3030 3207 . - 1 ID=cds.g10280.t1;Parent=g10280.t1 NODE_1075_length_14171_cov_42.4786 . three_prime_UTR 2925 3029 . - . ID=g10280.t1.utr3p1;Parent=g10280.t1 #PROT g10280.t1 g10280 MKAILSRLAAAEVPFITRTASKTDLSDKGVDASSRATGESIAVASADPVVGASSSTRIGMHTSPVASPSLNRTQKGTAEPAHIETNSSSSTETASAVAVSAADTTRMLGAKRWHSLDSQASLESNEADHDAHHNVLEGQEASPPSPASNNIALVAPSAADGVVSPVAPGQTAAEVYEATDSAPAMFVPPAFKRRSSVIATGLLARRLSEVSLSSNHSEVRGQISSSSPSASSGDVSSGDDAATSARTRAAKGKKRTLSRNNSADSGSTGSHSRRGRSGSRGSLSGQASGNVSASAKSTDPSHADHDGMDISEALKHSSPAGSSASASAHSGGRGSPPTLTRRLSFLNVGVSLPTTTASNSVPPMIRRHSKGSIDSIVSSESFAVGPRSVLEDPGASDTAAQNKMASAAFESITAAVASQAASTPLSSLSTGNNPPSPKAMMAAIRRRSVANALGQLQQSSMLTGEAATTGESAARRFSIKSITSNKDASSGDDNARSGGEGSANGKARSAPGTDTEKSVGGRTTDEEADSLTPERWNQWGQMLADWDTYIRWRGRTVRQCVREGIPAPLRGLVWQRLSKSYLSSTREVYEGLLRRSSSSEKQIRRDIVRTFPLHSFFAEREGQGQESLFNVLKAYSLYDAEVGYCQGSPFLVGLLLMQMPEEESFCTLVRIMYDYSMRELFKPGMLALEICLYQFDNLILEFMPDLHNHFKMHGVEVTMFGSQWFLTMFAASLPLPVVNRIMDIFFSEGMHTLFRFALAFLEQEKGILLALDFDEMLVHLKNGMTKKYKRGDSPLTNELVNKAVNYRLSTRTLARLEKEFLAEKQRQAMEMDEIARLKRDLQKSQEKMQELNAENKVLADRLLQAQVIDFQNKEEIYRLCNELALARNADENVRLVSILRPAKEDLERELGDVLGQLVDLKIKYAELQCRSSAENS* # ORIGINAL: g10279.t1 original gene structure, not modified by PASA NODE_1075_length_14171_cov_42.4786 AUGUSTUS gene 1045 2481 . + . ID=g10279;Name=g10279.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS mRNA 1045 2481 . + . ID=g10279.t1;Parent=g10279;Name=g10279.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS exon 1045 2481 . + . ID=g10279.t1.exon1;Parent=g10279.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS CDS 1045 2481 . + 0 ID=cds.g10279.t1;Parent=g10279.t1 #PROT g10279.t1 g10279 MEAITVSLVSLLGKQAFGVLAKKAMDGVTVRLNKLAAAEKKVAEATRLKKDLQARLSAIAPQVETIVMAAASTADRSLVAAIDLAALFLDDLQSALQTIGDAEEDALIARLSQLNVRADALVPYLSMALSSMAASRPLALANGTSVSASILLRASRTVAASRIRALDGTLPGINTVVVAKMTVRLYNVFASAARQSTARPESWQLHSTSCAVEIRRGELNGPPTSHAYTVVCTPSEVHDATKGEFAFSCRDICIVYKSLSGSILALEDEASSPVIVVGIAANSGRTMTASASAHTTPQKSAQVGGARGAVDGATVASRLPGTPIRSQPGTPVWSNRNTPRKGTVDDVESASGCYYIALEAVGSDALGADERLDGDKGGDSSDESDGSSHDDAVTASRRSTSDSPRTRRRKNGELEGAVVSRSAAFEHTLRLCCLEAVERRDHESASDAAITAFFENGPIPTVAVADSVRVSLEALAIA* # ORIGINAL: g10282.t1 original gene structure, not modified by PASA NODE_1075_length_14171_cov_42.4786 AUGUSTUS gene 9963 11451 . - . ID=g10282;Name=g10282.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS mRNA 9963 11451 . - . ID=g10282.t1;Parent=g10282;Name=g10282.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS exon 10147 11451 . - . ID=g10282.t1.exon1;Parent=g10282.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS CDS 10147 11451 . - 0 ID=cds.g10282.t1;Parent=g10282.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS exon 9963 10025 . - . ID=g10282.t1.exon2;Parent=g10282.t1 NODE_1075_length_14171_cov_42.4786 AUGUSTUS CDS 9963 10025 . - 0 ID=cds.g10282.t1;Parent=g10282.t1 #PROT g10282.t1 g10282 MSSSEEEWADDGPALRKRKLSDSGDASTPKNKSKKKKKAAKAKSTIKAEKSSSATLQSQNNQHPQQSHQQQQQQRQQHDKSQSNESDEDRPDEDEVANNGGEEVEDDDFEVAAAETHVHRDAADQEPTKANSGAGRNYTVSVAVSGSVLALAQSAELRAHLVGQIARALTLFCVDEVIVYREEIKAKGSSIDAQSAKAKHELQFVRLLQYLETPQYLRKAFFPMHADLKFAGLVSPLDAPHHMRIDDDFEYREGVVLDRPVRQGDGSLVNAGMRKDVRIDRHLQPGMRVTVQLSSVDQNAQYGTATGSRDSRNFHGKVVAPSAPRANAGIYWGYQVRLANTLASVFSEGPHEDGYDLTIGIDEQKGDNIDACVWPGKSASALAPFKHALIVFGGPDGLDAAVESEQIMGVDEARHLFDRYLNPCPNMGTRSIRCEESILASLSLLRPLLAKAASE* # PASA_UPDATE: g10281.t1, single gene model update, valid-1, status:[pasa:asmbl_284,status:12], valid-1 NODE_1075_length_14171_cov_42.4786 . gene 7651 9711 . - . ID=g10281;Name=g10281.t1 NODE_1075_length_14171_cov_42.4786 . mRNA 7651 9711 . - . ID=g10281.t1;Parent=g10281;Name=g10281.t1 NODE_1075_length_14171_cov_42.4786 . five_prime_UTR 9307 9711 . - . ID=g10281.t1.utr5p1;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . exon 9288 9711 . - . ID=g10281.t1.exon1;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . CDS 9288 9306 . - 0 ID=cds.g10281.t1;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . exon 8711 8911 . - . ID=g10281.t1.exon2;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . CDS 8711 8911 . - 2 ID=cds.g10281.t1;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . exon 7651 8457 . - . ID=g10281.t1.exon3;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . CDS 7970 8457 . - 2 ID=cds.g10281.t1;Parent=g10281.t1 NODE_1075_length_14171_cov_42.4786 . three_prime_UTR 7651 7969 . - . ID=g10281.t1.utr3p1;Parent=g10281.t1 #PROT g10281.t1 g10281 MDLYGSGRKSGDVSHLASVCPYVEGDKIEVLFRDHWHSGEFVCENAWGGLDVRYDDAKWDIARVSPKSVRQPEALKKTKKSRKESRMEIAIEKKMSVATGPSTPLAMSVALNSHKGSGVALIAASSSTAVSQIASSASLPGKMTPQEATLSQGTTKSPVGPGPPMPSTPSVIPASVFAPEPVPIKGSLSLTEETVLKKRRSIVMDEAEENIVMSLRIKTNTSSNAGKSSRTCVIL* # ORIGINAL: g12030.t1 original gene structure, not modified by PASA NODE_3724_length_2886_cov_38.6485 AUGUSTUS gene 273 2792 . - . ID=g12030;Name=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS mRNA 273 2792 . - . ID=g12030.t1;Parent=g12030;Name=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS exon 2259 2792 . - . ID=g12030.t1.exon1;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS CDS 2259 2792 . - 0 ID=cds.g12030.t1;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS exon 1368 2024 . - . ID=g12030.t1.exon2;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS CDS 1368 2024 . - 0 ID=cds.g12030.t1;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS exon 958 1054 . - . ID=g12030.t1.exon3;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS CDS 958 1054 . - 0 ID=cds.g12030.t1;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS exon 614 708 . - . ID=g12030.t1.exon4;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS CDS 614 708 . - 2 ID=cds.g12030.t1;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS exon 273 359 . - . ID=g12030.t1.exon5;Parent=g12030.t1 NODE_3724_length_2886_cov_38.6485 AUGUSTUS CDS 273 359 . - 0 ID=cds.g12030.t1;Parent=g12030.t1 #PROT g12030.t1 g12030 MHNCSTDNNHIVFFHIISDQVQSARFYDAIGLVLRRQWETPSQQFFSYGCKPEFAPEGVKDLKDVDDVSTGATQQTRPSRPEGGEIFLQLEVEKFPTSREFNFEAKGVRDVNGVHVVMYCRNASAIISKVLGLNPAAEYNLFANGDLQIGVLVDPNGLMLRLIESKEEYLASEQTVAEQDTQNKANANPVDARAAILEESEEAPQTPLKGSRVSSPHPSDRSVSTAAVIAAALLRPSKDDRKTSASAFNSSLAAGSLGKMPSRTDQTAIPPPPPPPPPMKRKASLASLVLAAKEQSEEEDKSPPEEVKVTPEVYRIGCVALQCWNAQKAASFYEKIFSQPRHANQRGVMDVLDGGKQGQGQGPGQQALDSSSHPGLASQSVASVEGAPQPPPLTRQESGTTDIFKATAEMRRMDTRLGFHIVDRELVKSGVIQTEYFWLANGPRDRFGALCFIERSTRTSKLGYGRSTLDAKFASAARSKDSPLLGLSE* # PASA_UPDATE: g5765.t1, single gene model update, valid-1, status:[pasa:asmbl_5595,status:12], valid-1 NODE_3120_length_4253_cov_51.5302 . gene 3033 4097 . + . ID=g5765;Name=g5765.t1 NODE_3120_length_4253_cov_51.5302 . mRNA 3033 4097 . + . ID=g5765.t1;Parent=g5765;Name=g5765.t1 NODE_3120_length_4253_cov_51.5302 . five_prime_UTR 3033 3104 . + . ID=g5765.t1.utr5p1;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . exon 3033 3309 . + . ID=g5765.t1.exon1;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . CDS 3105 3309 . + 0 ID=cds.g5765.t1;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . exon 3477 3639 . + . ID=g5765.t1.exon2;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . CDS 3477 3639 . + 2 ID=cds.g5765.t1;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . exon 3771 3827 . + . ID=g5765.t1.exon3;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . CDS 3771 3827 . + 1 ID=cds.g5765.t1;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . exon 3980 4097 . + . ID=g5765.t1.exon4;Parent=g5765.t1 NODE_3120_length_4253_cov_51.5302 . CDS 3980 4097 . + 1 ID=cds.g5765.t1;Parent=g5765.t1 #PROT g5765.t1 g5765 MAPYNEEPNEHTRLIINTVPVDARQSLVNVETVFSFNNVTYDLDPDTNIFKRIVHGKTPGRRLLHDVYGLVRPGESLAIMGGSGAGKSTLLDVLANRKHQGTIGGSILVNGQPRNALFKRLSGYVTQDDALIGTLTVEETLMYTAQLRLSSSLPKEEKRRRVSPFFKLCLICTFSFRAEF* # ORIGINAL: g5764.t1 original gene structure, not modified by PASA NODE_3120_length_4253_cov_51.5302 AUGUSTUS gene 43 2370 . + . ID=g5764;Name=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS mRNA 43 2370 . + . ID=g5764.t1;Parent=g5764;Name=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS exon 43 175 . + . ID=g5764.t1.exon1;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS CDS 43 175 . + 2 ID=cds.g5764.t1;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS exon 387 561 . + . ID=g5764.t1.exon2;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS CDS 387 561 . + 1 ID=cds.g5764.t1;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS exon 706 1243 . + . ID=g5764.t1.exon3;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS CDS 706 1243 . + 0 ID=cds.g5764.t1;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS exon 1338 1641 . + . ID=g5764.t1.exon4;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS CDS 1338 1641 . + 2 ID=cds.g5764.t1;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS exon 1794 2370 . + . ID=g5764.t1.exon5;Parent=g5764.t1 NODE_3120_length_4253_cov_51.5302 AUGUSTUS CDS 1794 2370 . + 1 ID=cds.g5764.t1;Parent=g5764.t1 #PROT g5764.t1 g5764 PGLFRTDPSASDRLTPWLSRELQVLVGEAHVDFLNKYILTLLRRVEMQSDEFVSLMRPFLFGRTEHFIHELACFARSPYDMVAYDAHVQYDGLPPITSPGMQGAGGPAAATHHPTAHTRQLHTRWAPADTHRDDAAGPSTMPHAPLHVLSSVRQRAALISELIFDEEDMGYLVDAHPELLSRAVGSASSSSSDGDGDDRLTDRDNRGHGVANERDVRTVLGGRQRSVSGPVNIGPASAGHVGTQLPAQRNAEPHNGDGSARRVRHSGDGNGGDGDGRGGSDIHTRADMTAVDMTVIDMAAVDMTAIDATVIDTMTMSTRNVRGIGAGGITRAAAVRDPLRGHPTHHVTGTDGDASRRHRGRRGRLGLHRHLGAVLHTEGLLIGRHSRSADDNERRPHNVARAQQLSVLHYESGDAVRHAGEDAAVRSRDANAPPAGVSVPHGDDGDGEDQGAHRRNHSTNGQSARGLSSTRGNAPHPHPQAGADRRQQTGAVPSGRLRGVRTLPINLPADLRQLITPAVVGNDINEAVLRSECNARVAVSTTVQPTEDLMTLLRSRLQKEREIAEARRLNPATN* # ORIGINAL: g6924.t1 original gene structure, not modified by PASA NODE_3707_length_2912_cov_34.5735 AUGUSTUS gene 97 1287 . + . ID=g6924;Name=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS mRNA 97 1287 . + . ID=g6924.t1;Parent=g6924;Name=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS exon 97 435 . + . ID=g6924.t1.exon1;Parent=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS CDS 97 435 . + 2 ID=cds.g6924.t1;Parent=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS exon 716 877 . + . ID=g6924.t1.exon2;Parent=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS CDS 716 877 . + 2 ID=cds.g6924.t1;Parent=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS exon 1073 1287 . + . ID=g6924.t1.exon3;Parent=g6924.t1 NODE_3707_length_2912_cov_34.5735 AUGUSTUS CDS 1073 1287 . + 2 ID=cds.g6924.t1;Parent=g6924.t1 #PROT g6924.t1 g6924 FVFGERGKAVGQQQDLITEVIPSSLYVCTEADDAPPPTVAMRCHAIAVIIHLSPSHMTHLGAADGVTTGTDFSMQTVVTIEGRTYDYCWIPPPQHKSAADFATFFRRICGVIYDAHRKDLAVLVWGGGGMLSSAVAVACLMHSRGHSLRAAFNHMQRLRPFDVPNFDIASHLQRLEMKLLAEAGEACQPVFLAQYVRDTLPDWAVDSQAFIRALASTDCDVARAMEILVGTSGKQST* # PASA_UPDATE: g4664.t1, single gene model update, valid-1, status:[pasa:asmbl_3179,status:12],[pasa:asmbl_3180,status:12], valid-1 NODE_1995_length_8175_cov_32.4631 . gene 217 4574 . + . ID=g4664;Name=g4664.t1 NODE_1995_length_8175_cov_32.4631 . mRNA 217 4574 . + . ID=g4664.t1;Parent=g4664;Name=g4664.t1 NODE_1995_length_8175_cov_32.4631 . five_prime_UTR 217 218 . + . ID=g4664.t1.utr5p1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 217 554 . + . ID=g4664.t1.exon1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 219 554 . + 0 ID=cds.g4664.t1;Parent=g4664.t1;5_prime_partial=true NODE_1995_length_8175_cov_32.4631 . exon 772 919 . + . ID=g4664.t1.exon2;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 772 919 . + 0 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 1278 1511 . + . ID=g4664.t1.exon3;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 1278 1511 . + 2 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 1674 1754 . + . ID=g4664.t1.exon4;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 1674 1754 . + 2 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 1974 2580 . + . ID=g4664.t1.exon5;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 1974 2580 . + 2 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 2821 2881 . + . ID=g4664.t1.exon6;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 2821 2881 . + 1 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 3223 3426 . + . ID=g4664.t1.exon7;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 3223 3426 . + 0 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . exon 3796 4574 . + . ID=g4664.t1.exon8;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . CDS 3796 3837 . + 0 ID=cds.g4664.t1;Parent=g4664.t1 NODE_1995_length_8175_cov_32.4631 . three_prime_UTR 3838 4574 . + . ID=g4664.t1.utr3p1;Parent=g4664.t1 #PROT g4664.t1 g4664 GACVAVYDNAVYMFGGWSASGFSLHTCHQATLHKLTLSRSQDSRRRGINSSDVDRDSDNGDNEEDVDGTAYGGESRGNRVRVKARWTTLEGQSRYPLNGRDKTTAIAYEGRLYIFGGFGPATHPFLSPACFNGDPDNTITDRNGHVIHAIGWNNELLMYDIETGTWDRPHYRGSAPCARAAHSFTLVGHVAYVIGGRSINGRLNDVYALDMTTLEWTEVAIAADSPHPPRRSWHGAALLANGRTILTYGGMDTESHAMNEVWLFDTVDRVWIPMAGVHAREALHTFQPLAATITQPHPHTRALGGTTPDSPPLDLSRPRGRIPRLLWHTAVADTASGGRVYYFGGTRQGPFGRAANTNDANATAGHGRGRATRGGRPGRGSRREGAGVGGLDGEVANSRQSRLPRGLMRLLRVIGVGRRNGAGEPALAEGNGTANNNNNGNNGTAGERDMDDEGDESGDGASDVSRDDGLLSIDSGDEPHEDDVQSTEETNDVHEHSSHSGQLYVMETSFPTLLSLCMRHYERTAQRTSSSGWQPHALTDEVQVAASILGDTLQKREWLQRIRPVLHGWV* # ORIGINAL: g4665.t1 original gene structure, not modified by PASA NODE_1995_length_8175_cov_32.4631 AUGUSTUS gene 4027 5588 . - . ID=g4665;Name=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS mRNA 4027 5588 . - . ID=g4665.t1;Parent=g4665;Name=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 5468 5588 . - . ID=g4665.t1.exon1;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 5468 5588 . - 0 ID=cds.g4665.t1;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 5233 5351 . - . ID=g4665.t1.exon2;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 5233 5351 . - 2 ID=cds.g4665.t1;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 4899 4988 . - . ID=g4665.t1.exon3;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 4899 4988 . - 0 ID=cds.g4665.t1;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 4512 4626 . - . ID=g4665.t1.exon4;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 4512 4626 . - 0 ID=cds.g4665.t1;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 4027 4340 . - . ID=g4665.t1.exon5;Parent=g4665.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 4027 4340 . - 2 ID=cds.g4665.t1;Parent=g4665.t1 #PROT g4665.t1 g4665 MTSSTARSHVLRVGDVASVRAIVGGIAEKEAKWFASLADEVVSEFSARGLDPAHMHMYGEICFLLLGLKPCVLLSELTPSALARMYLDAVISPVRTSLELAGISLGLLPEGTRTANYDASGVAFLANMSHPLLSGMPVVEFLSREAPMGVLSEATLQQLLDYPADIPDDPTRATASCDTQADMYEVAYVDASPVAHSIMRQAGGSGSASEAVLSTTYLAFRGQLDACRAHFRRYKGASEGILDLKMVVSPLS* # ORIGINAL: g4666.t1 original gene structure, not modified by PASA NODE_1995_length_8175_cov_32.4631 AUGUSTUS gene 5892 8049 . + . ID=g4666;Name=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS mRNA 5892 8049 . + . ID=g4666.t1;Parent=g4666;Name=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 5892 6192 . + . ID=g4666.t1.exon1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 5892 6192 . + 0 ID=cds.g4666.t1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 6466 6565 . + . ID=g4666.t1.exon2;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 6466 6565 . + 2 ID=cds.g4666.t1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 6730 6837 . + . ID=g4666.t1.exon3;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 6730 6837 . + 1 ID=cds.g4666.t1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 7129 7257 . + . ID=g4666.t1.exon4;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 7129 7257 . + 1 ID=cds.g4666.t1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 7471 7600 . + . ID=g4666.t1.exon5;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 7471 7600 . + 1 ID=cds.g4666.t1;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS exon 7825 8049 . + . ID=g4666.t1.exon6;Parent=g4666.t1 NODE_1995_length_8175_cov_32.4631 AUGUSTUS CDS 7825 8049 . + 0 ID=cds.g4666.t1;Parent=g4666.t1 #PROT g4666.t1 g4666 MSSGHSKKRTSDEAFGGDNTPPPQQQQQQQQQSDIEAGLSLASLPHQLKDAPPSEICKSAVSNAVMATIDPQAVGVGAPTEQSAKRSADATQQQRAGDGRAVKRGRWTQPSEEDDTPVMRMFRGFQRRLDVKVTTPINGIELQHDKHERLVKSSRDVTIASKRVIFLLQRLLASGERDIPDDAYGEVDAKLAEIKDVLRRIAEDVGPHSEHYRFHRAISPGMQEFIEAFTLYHYAKTRTLLSLDDLERYLVWDDGKISLLVTTSDYVLGVADLSGEMMRLCVQSVSTGYANQPMEACAFLRSLYECKHPSIPPYIHTILPSMHIFLPTYH* # ORIGINAL: g8857.t1 original gene structure, not modified by PASA NODE_5016_length_1076_cov_50.9071 AUGUSTUS gene 2 266 . + . ID=g8857;Name=g8857.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS mRNA 2 266 . + . ID=g8857.t1;Parent=g8857;Name=g8857.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS exon 2 266 . + . ID=g8857.t1.exon1;Parent=g8857.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS CDS 2 266 . + 1 ID=cds.g8857.t1;Parent=g8857.t1 #PROT g8857.t1 g8857 TASPDVISGKIKPYSGMADCFARTRADQGMKSFWRGNINNCLRYAPQQGSALAFNDVLSSKTDFWKSLGVKLFSGVAVTRTSTTQLH* # ORIGINAL: g8858.t1 original gene structure, not modified by PASA NODE_5016_length_1076_cov_50.9071 AUGUSTUS gene 834 1076 . + . ID=g8858;Name=g8858.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS mRNA 834 1076 . + . ID=g8858.t1;Parent=g8858;Name=g8858.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS exon 834 1076 . + . ID=g8858.t1.exon1;Parent=g8858.t1 NODE_5016_length_1076_cov_50.9071 AUGUSTUS CDS 834 1076 . + 0 ID=cds.g8858.t1;Parent=g8858.t1 #PROT g8858.t1 g8858 MKYDTQHHDRNFYTLAVRQQQHTAGCLIGGVSAFAAVTVARTVVMPFNYPFDTVRRRMMFQSEKPKSERLYKGSIDCFTKV # PASA_UPDATE: g9538.t1, single gene model update, valid-1, status:[pasa:asmbl_440,status:3], valid-1 NODE_1115_length_13830_cov_43.4403 . gene 6653 9174 . - . ID=g9538;Name=g9538.t1 NODE_1115_length_13830_cov_43.4403 . mRNA 6653 9174 . - . ID=g9538.t1;Parent=g9538;Name=g9538.t1 NODE_1115_length_13830_cov_43.4403 . five_prime_UTR 9028 9174 . - . ID=g9538.t1.utr5p1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 8722 9174 . - . ID=g9538.t1.exon1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 8722 9027 . - 0 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 8489 8543 . - . ID=g9538.t1.exon2;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 8489 8543 . - 0 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 8006 8250 . - . ID=g9538.t1.exon3;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 8006 8250 . - 2 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 7729 7891 . - . ID=g9538.t1.exon4;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 7729 7891 . - 0 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 7467 7591 . - . ID=g9538.t1.exon5;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 7467 7591 . - 2 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 7165 7266 . - . ID=g9538.t1.exon6;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 7165 7266 . - 0 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . exon 6653 7039 . - . ID=g9538.t1.exon7;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . CDS 6851 7039 . - 0 ID=cds.g9538.t1;Parent=g9538.t1 NODE_1115_length_13830_cov_43.4403 . three_prime_UTR 6653 6850 . - . ID=g9538.t1.utr3p1;Parent=g9538.t1 #PROT g9538.t1 g9538 MPILRLVPAFRSATATNLRRPSASQCSHAAVKVRSFSQHAHSRTPVAIGNALRPSMVSRRDVVRPSIALASVGQVRFLNSGKHDIAAHCLQASSLDLSMISQEEVVQSVISQPTIMAPSSGQLASLINTPSWSSFDHAESTFWPLVKVQETLHYFHEGWGLPWWGSIVTLTVLFRLAVLPVNISLVRNAARLNMIRPLLIEKVAEYKDPALTDSEKRQKAEEILDVFKTHKCNPFWNIAPPFMIAPLFLTVFFGVEGILLHDPTCHTGGTLWFPNLSVPDATWTLPVMSAVTWMMTLRFGTDRARGPLAATLEQHLSYVSLAMIPITQPLPTGAFVYWITSNTFTLVQIFLLRRKLVRHLLSIPPPQGPPSGQLDLDSPHGQTPSSSSNEHRPL* # PASA_UPDATE: g9539.t1, single gene model update, valid-1, status:[pasa:asmbl_443,status:12], valid-1 NODE_1115_length_13830_cov_43.4403 . gene 11070 12959 . + . ID=g9539;Name=g9539.t1 NODE_1115_length_13830_cov_43.4403 . mRNA 11070 12959 . + . ID=g9539.t1;Parent=g9539;Name=g9539.t1 NODE_1115_length_13830_cov_43.4403 . five_prime_UTR 11070 11107 . + . ID=g9539.t1.utr5p1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 11070 11201 . + . ID=g9539.t1.exon1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 11108 11201 . + 0 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 11308 11457 . + . ID=g9539.t1.exon2;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 11308 11457 . + 2 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 11726 11874 . + . ID=g9539.t1.exon3;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 11726 11874 . + 2 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 12045 12131 . + . ID=g9539.t1.exon4;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 12045 12131 . + 0 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 12221 12328 . + . ID=g9539.t1.exon5;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 12221 12328 . + 0 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 12500 12564 . + . ID=g9539.t1.exon6;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 12500 12564 . + 0 ID=cds.g9539.t1;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . exon 12797 12959 . + . ID=g9539.t1.exon7;Parent=g9539.t1 NODE_1115_length_13830_cov_43.4403 . CDS 12797 12959 . + 1 ID=cds.g9539.t1;Parent=g9539.t1 #PROT g9539.t1 g9539 MTPLQVEFAVDMTCSSCVEAVRAALASLGDAVQASDINLEAKRLVVTSSLPSHIIMAAISNKGLRVKLRAMGSALESAGVEVANLGAAVCILNATGGSHRLENEGVCGVVRFVQVSEAECVIEGTLDNLTPGLHGLHVHEFGDLSDGCLSAGDHYNPHNEVHGDRLSSRRHVGDLGNVAADWSGRASFRFSDALIKVWDIIGRSLVVHAGEDDLGLGCHTTSPINGNSGARVGCGVIARSAGILQNTKQVCACDGRVIWEDRPIGEAVPKL* # PASA_UPDATE: g9537.t1, single gene model update, valid-1, status:[pasa:asmbl_439,status:3], valid-1 NODE_1115_length_13830_cov_43.4403 . gene 2904 6408 . - . ID=g9537;Name=g9537.t1 NODE_1115_length_13830_cov_43.4403 . mRNA 2904 6408 . - . ID=g9537.t1;Parent=g9537;Name=g9537.t1 NODE_1115_length_13830_cov_43.4403 . five_prime_UTR 6268 6408 . - . ID=g9537.t1.utr5p1;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . exon 6265 6408 . - . ID=g9537.t1.exon1;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . CDS 6265 6267 . - 0 ID=cds.g9537.t1;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . exon 3281 5791 . - . ID=g9537.t1.exon2;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . CDS 3281 5791 . - 0 ID=cds.g9537.t1;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . exon 2904 3139 . - . ID=g9537.t1.exon3;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . CDS 3128 3139 . - 0 ID=cds.g9537.t1;Parent=g9537.t1 NODE_1115_length_13830_cov_43.4403 . three_prime_UTR 2904 3127 . - . ID=g9537.t1.utr3p1;Parent=g9537.t1 #PROT g9537.t1 g9537 MVNFSVDEVRSLMDKKNNIRNMSVIAHVDHGKSTLTDSLIGKAGIIAQARAGELRFMDTRPDEQERCITIKSTAISLFFELEEKDMPFVSQAHDGRAFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAICERIKPVLMMNKMDRALLELQLDMEDLYQTFQRIVENVNVIIATYGEGEEGPMGDIQVAPPLGTVAFGSGLHGWAFTLKVFAEMYADKFKIDSKSMMKRLWGDAFYHPGEKKWAKTSGPGYVRGFVQFILDPIYKLFDAILKQKKDVIEKMLVVLSVKLTVEEKEQEGKALLKTIMRKWLPAGDALLQMITIHLPSPATAQKYRCELLYEGPMDDEAAVGIRTCDPKAPLMMYVSKMVPTSDKGRFYAFGRVFSGVVATGQKVRLMGPNYLPGSKTDLSVKAIQRTVLMMGRYVEAIEDVPCGNICGLVGVDQYLVKTGTISTFEDAHNMRVMKYSVSPVVRVAVECKNPADLPKLVEGLKRLAKSDPLVQCTIEESGEHIVAGAGELHLEICLKDLEEDHAGVPLKKSDPVVSYRETVAKLSSITCLSKSPNKHNRIYMQATPMESGLPEDIDSGAVSPKQDPKIQARYLADKYNWDVTEARKIWCFGPETTGPNMLVDTTKGVQYLNEIKDSCVAGFQWATKEGVLCDENMRGCRFNVMDVTLHADAIHRGGGQIIPTARRVIYASVLTADPKILEPIYLVEIQCPEAAIGGIYGVLNRRRGHVFGEERVAGTPMYIVKAFLPVNESFGFTADLRSHTGGQAFPQCVFDHWQILPGDVFDVTSKPRQVVEGCRKRKGLKEGVPDLDQYYDKL* # ORIGINAL: g9536.t1 original gene structure, not modified by PASA NODE_1115_length_13830_cov_43.4403 AUGUSTUS gene 174 1108 . + . ID=g9536;Name=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS mRNA 174 1108 . + . ID=g9536.t1;Parent=g9536;Name=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS exon 174 273 . + . ID=g9536.t1.exon1;Parent=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS CDS 174 273 . + 2 ID=cds.g9536.t1;Parent=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS exon 447 546 . + . ID=g9536.t1.exon2;Parent=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS CDS 447 546 . + 1 ID=cds.g9536.t1;Parent=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS exon 875 1108 . + . ID=g9536.t1.exon3;Parent=g9536.t1 NODE_1115_length_13830_cov_43.4403 AUGUSTUS CDS 875 1108 . + 0 ID=cds.g9536.t1;Parent=g9536.t1 #PROT g9536.t1 g9536 SIVRGTTAKEIINMVRECGAKKVYMASCAPPVKYANVYGIDMPSRHELVAHDRSDAEVATAIGADRDLDDLIRSVQQFNPSIPAFDTSVFDGKYVTGDVSREYLEGLEAIRNDSAKATKDPSMRKNGSGDIEMLGLYNITIAS* # PASA_UPDATE: g12187.t1, single gene model update, valid-1, status:[pasa:asmbl_3127,status:12], valid-1 NODE_1964_length_8313_cov_40.9525 . gene 4709 7175 . + . ID=g12187;Name=g12187.t1 NODE_1964_length_8313_cov_40.9525 . mRNA 4709 7175 . + . ID=g12187.t1;Parent=g12187;Name=g12187.t1 NODE_1964_length_8313_cov_40.9525 . five_prime_UTR 4709 4716 . + . ID=g12187.t1.utr5p1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 4709 4804 . + . ID=g12187.t1.exon1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 4717 4804 . + 0 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 4969 5371 . + . ID=g12187.t1.exon2;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 4969 5371 . + 2 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 5602 5821 . + . ID=g12187.t1.exon3;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 5602 5821 . + 1 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 6103 6273 . + . ID=g12187.t1.exon4;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 6103 6273 . + 0 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 6451 6568 . + . ID=g12187.t1.exon5;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 6451 6568 . + 0 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . exon 6726 7175 . + . ID=g12187.t1.exon6;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . CDS 6726 6937 . + 2 ID=cds.g12187.t1;Parent=g12187.t1 NODE_1964_length_8313_cov_40.9525 . three_prime_UTR 6938 7175 . + . ID=g12187.t1.utr3p1;Parent=g12187.t1 #PROT g12187.t1 g12187 MFLGGKKSEKMSSLRGFLLVLTLCAALANGYPLSTNSPSDKEVHTEFVITVYVEVPTTAPVTLFVTSDDDTVALPLWPSLLIPTGSYGPSYISVAAVGVGSAKIIFNVSSSDPNYSSATIDKVSVQVVHSRPLDICTAVIGWLYFAAWSLSFYPQIYLNWKRKSVVGLNFDFLALNLTGFLLYTFFNAGMFWSSTVKDEYKRRHPDGVLPVQANDVFFPIHASVLTIVNIIQCFIYERGDQRVSHVARGLVCTAWLFVVVGFFPTVLGPWNWLDYLYAFSYIKLGITLIKYIPQAVMNYRRKSTQGWSIGNILLDFTGGALSILQMFMLAYNNNDWSSIFGDPTKFGLGFFSILFDILFIIQHYFLYPYSPDNAKSAAEYEALYDPEDSGNVSGEKKRLLSSA* # ORIGINAL: g12186.t1 original gene structure, not modified by PASA NODE_1964_length_8313_cov_40.9525 AUGUSTUS gene 184 2348 . - . ID=g12186;Name=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS mRNA 184 2348 . - . ID=g12186.t1;Parent=g12186;Name=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS exon 1783 2348 . - . ID=g12186.t1.exon1;Parent=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS CDS 1783 2348 . - 0 ID=cds.g12186.t1;Parent=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS exon 537 1486 . - . ID=g12186.t1.exon2;Parent=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS CDS 537 1486 . - 1 ID=cds.g12186.t1;Parent=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS exon 184 263 . - . ID=g12186.t1.exon3;Parent=g12186.t1 NODE_1964_length_8313_cov_40.9525 AUGUSTUS CDS 184 263 . - 2 ID=cds.g12186.t1;Parent=g12186.t1 #PROT g12186.t1 g12186 MPEDNIRCTPEDLMMIQTERSDLLTETIRMLKAHHTLAPLEQDERAPTVVELLAKLHLFEARMGINTLREEQHKDETCNAYIQWLQDGTYPDFTVTAEQQRKWAHRALMFQVVDGILYRIKNDNGVIGEEDNTDMLVEGARAVIPKSLQAALMEQFHDDPLAGHHGRTRTYHRIAERYYWSGLKEDVETNNASPNISQLMADVAQVVDVNQQFILPHHPQANGAGERMMHTVKDDLASMLEGQMDEWDLYAKAVAFAYNVSRHDTTTFSPFFLNTGRQAKTPTDVSMEPDKMLGPELKSEYAQKLEDRLSTAYSFVRERLKQTTEKAKTQYDDSHRDVQYNVGDKVWVYFPSVQAGQISSKLARGWRGPFKIVEWTSDVSYRVKPAQATVRLQACGAYAAHFAKGLPVHVSCIKRFYSRVQRPTRADFLPDLDDDAPRPDNKQPPDEGAGDDVQLDAESITRAQVLSDMGLQEVQFPREHFRHMAVEDAIGPAPKRESRGVRRSRNYTVADPIDKEEQWEYDDETVYLVET* # PASA_UPDATE: g7209.t1, single gene model update, valid-1, status:[pasa:asmbl_10017,status:12], valid-1 NODE_927_length_15795_cov_40.2093 . gene 6255 8356 . - . ID=g7209;Name=g7209.t1 NODE_927_length_15795_cov_40.2093 . mRNA 6255 8356 . - . ID=g7209.t1;Parent=g7209;Name=g7209.t1 NODE_927_length_15795_cov_40.2093 . five_prime_UTR 8184 8356 . - . ID=g7209.t1.utr5p1;Parent=g7209.t1 NODE_927_length_15795_cov_40.2093 . exon 7615 8356 . - . ID=g7209.t1.exon1;Parent=g7209.t1 NODE_927_length_15795_cov_40.2093 . CDS 7615 8183 . - 0 ID=cds.g7209.t1;Parent=g7209.t1 NODE_927_length_15795_cov_40.2093 . exon 6255 7481 . - . ID=g7209.t1.exon2;Parent=g7209.t1 NODE_927_length_15795_cov_40.2093 . CDS 6530 7481 . - 1 ID=cds.g7209.t1;Parent=g7209.t1 NODE_927_length_15795_cov_40.2093 . three_prime_UTR 6255 6529 . - . ID=g7209.t1.utr3p1;Parent=g7209.t1 #PROT g7209.t1 g7209 MAATIVHADIRGEPANLCKMAPQTDISANVVDVDRLRAELATHGQSHLLAFWDQLSEAERHHLAQDIQSIDIGRVNGFFREGMQTMAGASKLDEKLHPLPKDCFSSMIGNKKDPLRWESEGYKQIAAGKVAALLLAGGQGTRLGTTNPKGMYDVGLPSHKSLYQIQGERIAKLQKLVAEKMGVENVVIPWYIMTSDATKQSTIDYFAERDYFGLHPANLVFFEQGTLPCMTNDGKIILETKSSIAHSPDGNGGLYQALDTSGALSDMRRRGIEHVHAYCVDNILVHVADPVFIGYCVEKQAECGSKVVPKASPTEPVGVLCLCDGKYQVVEYSEITPQTAQRRNEDGALSFNAANIANHYFRVDFLEDIARTHLAQLRHHMAAKKIPTVDERGNTVTPAANNGYKMELFIFDVFPYAHSMAVLETERQSEFSPLKNAPSAADSNPVTCRRDLMALHRRFIVEAGGLIEGDDGSPVECEIDPAVSYAGEGLESRVKGKTFRSPILIS* # ORIGINAL: g7211.t1 original gene structure, not modified by PASA NODE_927_length_15795_cov_40.2093 AUGUSTUS gene 14984 15241 . - . ID=g7211;Name=g7211.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS mRNA 14984 15241 . - . ID=g7211.t1;Parent=g7211;Name=g7211.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 14984 15241 . - . ID=g7211.t1.exon1;Parent=g7211.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 14984 15241 . - 0 ID=cds.g7211.t1;Parent=g7211.t1 #PROT g7211.t1 g7211 MAGSADTVGHNSTSDIHGDDSSHTGLGSSDIGAGNNGGNGASDAVMASELAHLGVDVVNQSDLEQGLIAEARLFFHFHVLAHVRV* # ORIGINAL: g7210.t1 original gene structure, not modified by PASA NODE_927_length_15795_cov_40.2093 AUGUSTUS gene 9447 13885 . - . ID=g7210;Name=g7210.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS mRNA 9447 13885 . - . ID=g7210.t1;Parent=g7210;Name=g7210.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 13801 13885 . - . ID=g7210.t1.exon1;Parent=g7210.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 13801 13885 . - 0 ID=cds.g7210.t1;Parent=g7210.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 9447 13204 . - . ID=g7210.t1.exon2;Parent=g7210.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 9447 13204 . - 2 ID=cds.g7210.t1;Parent=g7210.t1 #PROT g7210.t1 g7210 MKSLENEVLSGGLYGDEAAAAKKDREKKGAGLREILRQQRVAQMESERERLVRTGFVTPFGTAIRDGSVQASAYRPLPNALPKTPAEKEKERIQRERSKGAAERKRRREDDAENAHKNSAKIARKSPSCKDGAAALGSTDVASGGAASGGASTEANENVGDDVEGDADVDVTGLDDAGAVSRGVVGGSKGAADDVAAGKTKKRPTQARAASAPKRRRRLVRRRRSGGESGNSSSSSSHESDDGHDSDGDYVVGGRFDGDLDKGLVEGESDEDEEGEEEKESDEAWIERHSLAAPRKISVQPDDGNEKMYFERVGRWRTLRAKARERKERRRRRRVESGLPADAADDDEDGYFTPEESDGVDTDEEFAAAAVDERIDFLPAADPDVPLNDDIRIPGEVWAALFPYQRVAVKWLSELRTLDCGGIVGDEMGLGKTVQVIAFLAALRYSRALTGPVLIVCPATIMHQWVAEFHKWWPGFKVAIFHESGSSKDNRDGKSHALDCVGEMSGGVLITTYSAVRLSLQALLRYRWAYVILDEGHKIRNPDAEVTIACKQFPTQNRIILSGSPIQNNLRELWSLFDFVYPGKLGTLPVFIAQFAVPISLGGYASASLVQVQTAYKCACVLRDTIGPYMIRRLKNDVEIQLPAKNEQVLFCRLTADQRRVYTDFLKSQDVTAILGGKRHVLYGIDIIRKICNHPALVGYTGLRGDVVHGGNNRRGADGDDGDDEDDPFRAELSGKMLVVDSLLRLWHAQGHRVLVFTQTRQMLDILERAVKKSGYNYRRMDGNTPIARRQPLISEFNASEGVFVFLLTTKVGGLGINLTGADRIVIYDPDWNPSTDLQARERAWRIGQKRPVTIYRLLTSGTIEEKIYHRQIFKQFLTNKILRDPRQRRFFKQNDLHELFTLGHEHAEHTETGEIFADTDPTLQILPSSMVGEKGAGKPKTRGNGKGKGRGKSSRGMRHSDDEDANADGSGDDDLSFRRRSAEGDGGGASGATDPDVAPGTISGLVRRDAYMVPKDEVEENGGDVGGGGGEGAKAQHAKDDDYILSTLFKTSGVHSALRHDSIMETAKPEAALVQREAERIAQSAVQALRESRDACMGASVGMPTWTGRSGAAGAPSGAAVKRFGKTVSASSPKHYTDAGRSSAGGGASTPPMSGPGSVPSTPPDTNGGATQKRRSTPNLFGGTGLLDTYSVDSATLLQRMRDKRGDSVADAERIGLARDLRRHILMAGGSMTTERLVEKFQARVRGVDAGIFKEVLKEIATLVKVGGVGVWQLKEEFE* # PASA_UPDATE: g7207.t1, single gene model update, valid-1, status:[pasa:asmbl_10016,status:3], valid-1 NODE_927_length_15795_cov_40.2093 . gene 1027 2716 . - . ID=g7207;Name=g7207.t1 NODE_927_length_15795_cov_40.2093 . mRNA 1027 2716 . - . ID=g7207.t1;Parent=g7207;Name=g7207.t1 NODE_927_length_15795_cov_40.2093 . five_prime_UTR 2534 2716 . - . ID=g7207.t1.utr5p1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . exon 2453 2716 . - . ID=g7207.t1.exon1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . CDS 2453 2533 . - 0 ID=cds.g7207.t1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . exon 2106 2219 . - . ID=g7207.t1.exon2;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . CDS 2106 2219 . - 0 ID=cds.g7207.t1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . exon 1654 1790 . - . ID=g7207.t1.exon3;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . CDS 1654 1790 . - 0 ID=cds.g7207.t1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . exon 1027 1484 . - . ID=g7207.t1.exon4;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . CDS 1325 1484 . - 1 ID=cds.g7207.t1;Parent=g7207.t1 NODE_927_length_15795_cov_40.2093 . three_prime_UTR 1027 1324 . - . ID=g7207.t1.utr3p1;Parent=g7207.t1 #PROT g7207.t1 g7207 MRLEKCYFCSSTVYPGHGVQFVRNDCKTFRFCRSKCHKAFKKKRNPRKVRWTKAFRKAAGKEMTLDATYEFEKRRQVPVKYDRNLWMTTVRAMKHISEIRQRREKQFIKNRLKVGKEVDKAHKIKEVAQHINLIQSPAVLSKSLALKAAQEVNRDDVEMAGDD* # ORIGINAL: g7208.t1 original gene structure, not modified by PASA NODE_927_length_15795_cov_40.2093 AUGUSTUS gene 4214 5278 . + . ID=g7208;Name=g7208.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS mRNA 4214 5278 . + . ID=g7208.t1;Parent=g7208;Name=g7208.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 4214 5278 . + . ID=g7208.t1.exon1;Parent=g7208.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 4214 5278 . + 0 ID=cds.g7208.t1;Parent=g7208.t1 #PROT g7208.t1 g7208 MMHAGSMHSAQAAGSRTSSLGTDEVSTPYVANDCIVQSVEEAEGWFAAAKTGTVQILRRHLSAEEKNQIAAGHVYIYDADYVERWTDNLTWSKAYSTKNGWLIYNEVEITSGDGAEKVRKRKKNGICKKIISHAGGKSSLRLVAYFEKGAVATQDKQSAMVASAASAAVAHAHAMRMGLSQAASRKQHGDHVFRLQQQQMAEYYHQQQLHADMMHAHHYMAAHSVPTASLSLGPHDAPYDSHDGRPAKRMRMDPGAYLVPDSEYGNLGAHGVYGFAPASVMPFHMMNPFSSMTGATEYGYSAPFPAEDGLFGPPPLQHPEDDVSFNSLRYLEPAADGVASGLQKQPSARTVELF* # ORIGINAL: g7206.t1 original gene structure, not modified by PASA NODE_927_length_15795_cov_40.2093 AUGUSTUS gene 226 752 . + . ID=g7206;Name=g7206.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS mRNA 226 752 . + . ID=g7206.t1;Parent=g7206;Name=g7206.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 226 378 . + . ID=g7206.t1.exon1;Parent=g7206.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 226 378 . + 0 ID=cds.g7206.t1;Parent=g7206.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS exon 627 752 . + . ID=g7206.t1.exon2;Parent=g7206.t1 NODE_927_length_15795_cov_40.2093 AUGUSTUS CDS 627 752 . + 0 ID=cds.g7206.t1;Parent=g7206.t1 #PROT g7206.t1 g7206 MRHVFGADWDPNALWMAGGFACAELDILGALKDEAFEELGRFYPEDVNREQVFLFPNPTRAIDKLNVQFVKGTDFYGRITMYKLDIVGDAVR* # ORIGINAL: g10038.t1 original gene structure, not modified by PASA NODE_2311_length_6764_cov_40.2347 AUGUSTUS gene 5968 6480 . + . ID=g10038;Name=g10038.t1 NODE_2311_length_6764_cov_40.2347 AUGUSTUS mRNA 5968 6480 . + . ID=g10038.t1;Parent=g10038;Name=g10038.t1 NODE_2311_length_6764_cov_40.2347 AUGUSTUS exon 5968 6480 . + . ID=g10038.t1.exon1;Parent=g10038.t1 NODE_2311_length_6764_cov_40.2347 AUGUSTUS CDS 5968 6480 . + 0 ID=cds.g10038.t1;Parent=g10038.t1 #PROT g10038.t1 g10038 MGVRVHPAPATPSSPIPADPCRSDSHIQTEDTRGPVPAHLVTGSTSAEQVHCGSNAQCNPSPGGPAVGSCTGAAATPAAGLGAHDRAVSIAGVVATAGPSTQASTGRASTAAALAEPGAAASRAGDAAERMASTIPAPGGTASRRASEGPLRQLKITLVGLTLNDAEPLA* # PASA_UPDATE: g10036.t1, single gene model update, valid-1, status:[pasa:asmbl_4019,status:12], valid-1 NODE_2311_length_6764_cov_40.2347 . gene 103 2391 . - . ID=g10036;Name=g10036.t1 NODE_2311_length_6764_cov_40.2347 . mRNA 103 2391 . - . ID=g10036.t1;Parent=g10036;Name=g10036.t1 NODE_2311_length_6764_cov_40.2347 . five_prime_UTR 2197 2391 . - . ID=g10036.t1.utr5p1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 2016 2391 . - . ID=g10036.t1.exon1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 2016 2196 . - 0 ID=cds.g10036.t1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 1544 1784 . - . ID=g10036.t1.exon2;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 1544 1784 . - 2 ID=cds.g10036.t1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 1282 1411 . - . ID=g10036.t1.exon3;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 1282 1411 . - 1 ID=cds.g10036.t1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 852 1019 . - . ID=g10036.t1.exon4;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 852 1019 . - 0 ID=cds.g10036.t1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 456 673 . - . ID=g10036.t1.exon5;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 456 673 . - 0 ID=cds.g10036.t1;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . exon 103 188 . - . ID=g10036.t1.exon6;Parent=g10036.t1 NODE_2311_length_6764_cov_40.2347 . CDS 103 188 . - 1 ID=cds.g10036.t1;Parent=g10036.t1;3_prime_partial=true #PROT g10036.t1 g10036 MAYEQDLSNNGPVFMAQMKQGANMFKYGQKTRRDKRLFVLSADTAQISWYAPQRKIPEGTVDIREIREVRQCSKCKYFDKLPEELRGKETLAFAIFYGNEFRLRSIYIAAESPEQYETWVQGTLFLMENESESPEPQAIKTWLRKEWNMLSRTTNERISLKEVTAFLTRANLKLKKERIKEVFTKVDRANGGQIGFEEFVELYHVLARIPQVESIFNHMTSSRIVMTLAEFQHFLVHDQKDDKARDPAYVRQLMNMFVETKSLKSEPAFSVKEFGTWLLSRHNSLWDATSLGTVSQDMNFPMSQYYIASSHNTYLTGDQFSSESSVEAYVRSLRNGCRCIE # PASA_UPDATE: g10037.t1, single gene model update, valid-1, status:[pasa:asmbl_4018,status:3], valid-1 NODE_2311_length_6764_cov_40.2347 . gene 3261 4784 . + . ID=g10037;Name=g10037.t1 NODE_2311_length_6764_cov_40.2347 . mRNA 3261 4784 . + . ID=g10037.t1;Parent=g10037;Name=g10037.t1 NODE_2311_length_6764_cov_40.2347 . five_prime_UTR 3261 3426 . + . ID=g10037.t1.utr5p1;Parent=g10037.t1 NODE_2311_length_6764_cov_40.2347 . exon 3261 3625 . + . ID=g10037.t1.exon1;Parent=g10037.t1 NODE_2311_length_6764_cov_40.2347 . CDS 3427 3625 . + 0 ID=cds.g10037.t1;Parent=g10037.t1 NODE_2311_length_6764_cov_40.2347 . exon 3824 4784 . + . ID=g10037.t1.exon2;Parent=g10037.t1 NODE_2311_length_6764_cov_40.2347 . CDS 3824 4581 . + 2 ID=cds.g10037.t1;Parent=g10037.t1 NODE_2311_length_6764_cov_40.2347 . three_prime_UTR 4582 4784 . + . ID=g10037.t1.utr3p1;Parent=g10037.t1 #PROT g10037.t1 g10037 MSSSFSADEPPPRYASDGVPGYSSVSVSASSLSPMLQDGDVPDSGEESQRVSIASAAPPPYDPSATAATPPSYESIYGRINLERARAGTVAEFVLAVLLLFLGTVGVIALFALTLGVPIAMIVVGAKYWDAHCTTDKLRLYLVVGGTCGVLLHLHAVFAKFYVSRKKRARDAAAAEAETDGGETTADATVGGIVTGATESDGGTANNDGGESGGAAAEAGEGGATRPISKKDEEPCGGLMALVKLFTLAWFICGNVWVYRYDPGEDYAHCDRTLYLFTYWLITSVYIVIGAVVLLFTCLTCCVVCCRPQTCRHEAPAT* # ORIGINAL: g207.t1 original gene structure, not modified by PASA NODE_5053_length_1049_cov_26.27 AUGUSTUS gene 1 979 . - . ID=g207;Name=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS mRNA 1 979 . - . ID=g207.t1;Parent=g207;Name=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS exon 951 979 . - . ID=g207.t1.exon1;Parent=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS CDS 951 979 . - 0 ID=cds.g207.t1;Parent=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS exon 617 756 . - . ID=g207.t1.exon2;Parent=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS CDS 617 756 . - 1 ID=cds.g207.t1;Parent=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS exon 1 347 . - . ID=g207.t1.exon3;Parent=g207.t1 NODE_5053_length_1049_cov_26.27 AUGUSTUS CDS 1 347 . - 2 ID=cds.g207.t1;Parent=g207.t1 #PROT g207.t1 g207 MLCGSWRESRDRCAVLQDVDPTAMVGILRYLYAGDVGFEEPSLRETARLAIYFGLEELMPVISRYVINGPCHSMHSPCAGCTPAMCTWLCFACAYSPVFDEVRDACVGSLASTSAIRTVWSTMSVTRLSDECFGFVAAAVLRSIGISTPTNSDAPAEQSATTERMGDTLYAE # PASA_UPDATE: g7963.t1, single gene model update, valid-1, status:[pasa:asmbl_5751,status:12], valid-1 NODE_3231_length_3952_cov_36.527 . gene 186 1413 . + . ID=g7963;Name=g7963.t1 NODE_3231_length_3952_cov_36.527 . mRNA 186 1413 . + . ID=g7963.t1;Parent=g7963;Name=g7963.t1 NODE_3231_length_3952_cov_36.527 . five_prime_UTR 186 187 . + . ID=g7963.t1.utr5p1;Parent=g7963.t1 NODE_3231_length_3952_cov_36.527 . exon 186 1413 . + . ID=g7963.t1.exon1;Parent=g7963.t1 NODE_3231_length_3952_cov_36.527 . CDS 188 1039 . + 0 ID=cds.g7963.t1;Parent=g7963.t1;5_prime_partial=true NODE_3231_length_3952_cov_36.527 . three_prime_UTR 1040 1413 . + . ID=g7963.t1.utr3p1;Parent=g7963.t1 #PROT g7963.t1 g7963 RFYMSRIGIRMLIGQHVEVFGDSEGQKSATAIGVIDEKCDVRAVVEDAAQNARFLCEQYYFHSPEVEIITPHGKDCPIDPFPYVPGHLYHILFEIFKNSMRAVVEHHGPDAVRYPKMRVVLAKGEEDLTIKVSDEGGGIPRSGMSQIFTYLYTTATPPPLEGDASTDMNHAPLAGFGYGLPLSRLYARYFGGDLNLISMEGYGTDAYIYLKVVAAEAGEVLPSYNSRDTPQKYAQSANQFSDWMQRATARSYSTAGSALSPFYAHDHMCASGSSMRAQAAHMN* # PASA_UPDATE: g7964.t1, single gene model update, valid-1, status:[pasa:asmbl_5752,status:12],[pasa:asmbl_5753,status:12], valid-1 NODE_3231_length_3952_cov_36.527 . gene 1796 3869 . - . ID=g7964;Name=g7964.t1 NODE_3231_length_3952_cov_36.527 . mRNA 1796 3869 . - . ID=g7964.t1;Parent=g7964;Name=g7964.t1 NODE_3231_length_3952_cov_36.527 . five_prime_UTR 3862 3869 . - . ID=g7964.t1.utr5p1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . exon 3730 3869 . - . ID=g7964.t1.exon1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . CDS 3730 3861 . - 0 ID=cds.g7964.t1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . exon 3277 3428 . - . ID=g7964.t1.exon2;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . CDS 3277 3428 . - 0 ID=cds.g7964.t1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . exon 2806 3073 . - . ID=g7964.t1.exon3;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . CDS 2806 3073 . - 1 ID=cds.g7964.t1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . exon 2502 2585 . - . ID=g7964.t1.exon4;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . CDS 2502 2585 . - 0 ID=cds.g7964.t1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . exon 1796 2321 . - . ID=g7964.t1.exon5;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . CDS 2181 2321 . - 0 ID=cds.g7964.t1;Parent=g7964.t1 NODE_3231_length_3952_cov_36.527 . three_prime_UTR 1796 2180 . - . ID=g7964.t1.utr3p1;Parent=g7964.t1 #PROT g7964.t1 g7964 MPAISGAFDQEASAVLMARLAVFRAESDDGPDVLRWLDRMLIRLCQKFGDYRKDDPASFRLNEMFSLYPQFMFHLRRSQFLQCFNNSPDETSYYRNKLNREDVTNSLIMIQPTLMSYSFSGPPEPVLLDSSSIQPDRILLLDAFFHIVIFHGETIAQWRKAGYQDQPSHENFRSLLQAPKEDAQGLLAGRFPLPRYIDCDQGGSQARFLLSKVNPSQTHNNSYAYGQEGGGGASVFTDDVSLQVFMDHLKKLAVSSSS* # PASA_UPDATE: g8082.t1, single gene model update, valid-1, status:[pasa:asmbl_4953,status:12], valid-1 NODE_2761_length_5200_cov_40.5768 . gene 248 2125 . + . ID=g8082;Name=g8082.t1 NODE_2761_length_5200_cov_40.5768 . mRNA 248 2125 . + . ID=g8082.t1;Parent=g8082;Name=g8082.t1 NODE_2761_length_5200_cov_40.5768 . five_prime_UTR 248 248 . + . ID=g8082.t1.utr5p1;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . exon 248 368 . + . ID=g8082.t1.exon1;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . CDS 249 368 . + 0 ID=cds.g8082.t1;Parent=g8082.t1;5_prime_partial=true NODE_2761_length_5200_cov_40.5768 . exon 602 941 . + . ID=g8082.t1.exon2;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . CDS 602 941 . + 0 ID=cds.g8082.t1;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . exon 1386 1443 . + . ID=g8082.t1.exon3;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . CDS 1386 1443 . + 2 ID=cds.g8082.t1;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . exon 1680 2125 . + . ID=g8082.t1.exon4;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . CDS 1680 1746 . + 1 ID=cds.g8082.t1;Parent=g8082.t1 NODE_2761_length_5200_cov_40.5768 . three_prime_UTR 1747 2125 . + . ID=g8082.t1.utr3p1;Parent=g8082.t1 #PROT g8082.t1 g8082 EAALNESRRSVIIIRSQLKKMEQEKKSYEVASDRLLKFVEKVREKLAQDVQVILALPAQPAAAPVEVVPEKKKKKKRFSITSKLGKESQMKEAEAAQQKQAELERQLEVFQRQQKEVEHQQSMLKDPKVLMVKLLSEEARDVLLAVKKMIEEESLPYGWEEAYTAEGLKYYIDHKTQTTSWVHPCSSIDHSTTL* # PASA_UPDATE: g8083.t1, single gene model update, valid-1, status:[pasa:asmbl_4954,status:12], valid-1 NODE_2761_length_5200_cov_40.5768 . gene 2113 4793 . - . ID=g8083;Name=g8083.t1 NODE_2761_length_5200_cov_40.5768 . mRNA 2113 4793 . - . ID=g8083.t1;Parent=g8083;Name=g8083.t1 NODE_2761_length_5200_cov_40.5768 . exon 4633 4793 . - . ID=g8083.t1.exon1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . CDS 4633 4793 . - 0 ID=cds.g8083.t1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . exon 4117 4503 . - . ID=g8083.t1.exon2;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . CDS 4117 4503 . - 1 ID=cds.g8083.t1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . exon 3762 3897 . - . ID=g8083.t1.exon3;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . CDS 3762 3897 . - 1 ID=cds.g8083.t1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . exon 3278 3571 . - . ID=g8083.t1.exon4;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . CDS 3278 3571 . - 0 ID=cds.g8083.t1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . exon 2113 2941 . - . ID=g8083.t1.exon5;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . CDS 2306 2941 . - 0 ID=cds.g8083.t1;Parent=g8083.t1 NODE_2761_length_5200_cov_40.5768 . three_prime_UTR 2113 2305 . - . ID=g8083.t1.utr3p1;Parent=g8083.t1 #PROT g8083.t1 g8083 MGSCEGVNPAIALGMHSVFEWFASISEQDRLIALNGFLERCPPTQLHQIESLLITKLRRDIISDLPDEVGVRILSYLDFHSLLQASLVSRSWRRISVDDRLWRILWQSVGWKLNSREEAEISAMVESGYVVRHVGGAHRSLVGGRTVLPVGCWKGLYMRRLAIERNWLRGEYTVNTLVGHTDSISCLQFEDDLLVTGSDDRTVRVWDAVMGRCALTLLGHSHVVICVQFDRSRSFIASGSWDGTVRLWRIPTGECFATLRDNNAPVLSLRIAGNYIITGSFDGFVRFFDVRTGQCSRATAAHSRPVICIECSGDRIATGSEDAVIKVWEKRSFRNLGVLIGHTAAVTCIYMDHDAREAVGGEIISGSCDKTIRVWSMKALTCIRILEGHMGAVHALFADASKIVSGSGNETIKIWDRHRGECLHTLEEHSGCVRAVRFDGERIASGAGDNTVKILDFAASDRRSRRSSRPASSSLTQRVEDVDWMEWGGDLDDEGFGQSSPPPDGFFQRRRARKISANFALEVRAVPPSTSGMESCT* # ORIGINAL: g5906.t1 original gene structure, not modified by PASA NODE_2897_length_4813_cov_40.2343 AUGUSTUS gene 94 4495 . + . ID=g5906;Name=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS mRNA 94 4495 . + . ID=g5906.t1;Parent=g5906;Name=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS exon 94 267 . + . ID=g5906.t1.exon1;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS CDS 94 267 . + 0 ID=cds.g5906.t1;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS exon 560 3104 . + . ID=g5906.t1.exon2;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS CDS 560 3104 . + 0 ID=cds.g5906.t1;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS exon 3318 3490 . + . ID=g5906.t1.exon3;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS CDS 3318 3490 . + 2 ID=cds.g5906.t1;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS exon 3903 4033 . + . ID=g5906.t1.exon4;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS CDS 3903 4033 . + 0 ID=cds.g5906.t1;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS exon 4273 4495 . + . ID=g5906.t1.exon5;Parent=g5906.t1 NODE_2897_length_4813_cov_40.2343 AUGUSTUS CDS 4273 4495 . + 1 ID=cds.g5906.t1;Parent=g5906.t1 #PROT g5906.t1 g5906 IDDKEANAFSSQLNKELDAMFDATLEEENSEDARRAAERMNKRFQEFEKKEKETPKTEQVHEPGDPSLMVFAVKYMNQHQKAVTGTMSFKKPKIQTFEEMLKFTKAPSIPTSMINITDAEITSLAVQNFSKLMKYLSGKEKPEVDRTLLQGIISSGIERPELRDEIYVQFFRQLHDNGRPESVTRVWHGIMCACVCFPPSNNLYRHLVAFFEKTSTGTDENAKLSAWCLQAMKKGKLNGVRKHPPSGAEMEGIQKMQPIFSRFHFLDGKAKAIGVDASSTAQDVVQQLAAKIELEHTDGWSLYEVLPDGLERCVRSVEYVADILTQWEKDARTSANPSKYATQSAKKMNQMTVSGMQAVGGGDTRFIFRKRLFKNPKEIPTDPVEYHLIYAQAVHSVVNDEFPVTDKIALQLAGLQAQVTWGEHDGSKITRYDDLGSYLPRRIIDAPVGTPARARTPSEWALEISKAHREFGSGKTELQAKVLYLTAVKQYPLYGATFYPVTYKGFWAHPNKIFLVVDIEGFKFVNQKNKALLAAYTYSRLDKVEVDAVESTVTLNLKEATQGEQLSFAFDTRQKEDIASLIASYSPQHRQWSQGAGGRGKAVHVSDEDRVKAYNDIREARKKVVATGLLRKPDAVAGGGFIAATLRKLPSKKSLKDSMDSMSASASTEDLSASIGGTDERNFRKEWWSYSKSKIPQTLTMLDPEDGETAIKMFTSLMIYSGLATTGGFETDDDPDRSTMVQMVIAKCLENDKLCNEFYLQLIKQTCDHPEANSKVNVAHWNFLALATCILVPKSEAILELLKVHLKRSALEQSSEEGKIASFTQKVLARTLENKNRKYPPSRQEILCVTARKPIHARFHFLDGQFRALSFDSSATTEEVVDMVKDRIGLRKPVKGFSLFEVFGNLERNMLPNEKVADAIFKWEKYAKSIHSTKTLKLTFKQRLFIGPFVTPTDEVEFNLVFHQAIDDVVNERFPVTQVEAVRLAALRAQVEMGDVDSSKPPSTDAYNAILEKYVPKHFRNSAGIVDELAREHLALTGTPSDKCNKTYLEFVKTWPLYGSTIFEVLVGVPLVAVCWFLGCQ* # ORIGINAL: g11674.t1 original gene structure, not modified by PASA NODE_3659_length_3002_cov_45.5743 AUGUSTUS gene 339 923 . + . ID=g11674;Name=g11674.t1 NODE_3659_length_3002_cov_45.5743 AUGUSTUS mRNA 339 923 . + . ID=g11674.t1;Parent=g11674;Name=g11674.t1 NODE_3659_length_3002_cov_45.5743 AUGUSTUS exon 339 923 . + . ID=g11674.t1.exon1;Parent=g11674.t1 NODE_3659_length_3002_cov_45.5743 AUGUSTUS CDS 339 923 . + 0 ID=cds.g11674.t1;Parent=g11674.t1 #PROT g11674.t1 g11674 MSKRREDTAELLLKADSIKDESLEAIRGIRRIAEEAKQNGIKTVEMLYEQEQQLARVNAKLDGVHANMAHAERHLTNMEKFLGLFTFPWKRKNRSWNWTASSAALPSGVKAGLGAPTPAPSPATVYKASIDPRDQEIDEGIDDVYRTVRDLKGLALDMSGSLDASNQQIDRISGRVDHTRARISHATKRTGALL* # PASA_UPDATE: g13524.t1, single gene model update, valid-1, status:[pasa:asmbl_9984,status:12], valid-1 NODE_916_length_15908_cov_32.4331 . gene 5273 7854 . + . ID=g13524;Name=g13524.t1 NODE_916_length_15908_cov_32.4331 . mRNA 5273 7854 . + . ID=g13524.t1;Parent=g13524;Name=g13524.t1 NODE_916_length_15908_cov_32.4331 . exon 5273 7854 . + . ID=g13524.t1.exon1;Parent=g13524.t1 NODE_916_length_15908_cov_32.4331 . CDS 5273 7618 . + 0 ID=cds.g13524.t1;Parent=g13524.t1 NODE_916_length_15908_cov_32.4331 . three_prime_UTR 7619 7854 . + . ID=g13524.t1.utr3p1;Parent=g13524.t1 #PROT g13524.t1 g13524 MASADTMAAPGSAYPLSSFHPSSSTDAPATHHIPSAPDAEILPTLNPSLSTALLDALAAACSSGHVDVVRCYMAAGVDANVVCRDGRPLIVTAAHTCRLNVVACLLAFGARIDVTDTRGFNALHYACRLGDRELATLLVSHGANVNTVKCDLWTPLHLASMNGHVEIASSLIANGAYVDARNNHGKTPLHLSCRAGYVSIVQLLLRHGAAVNMQSQKGGTPLHVASKRGYPEIVTALIDNGAKLDIPNGEKMLPMHFACAGGHVEVVFKLASSGADVNALVGVASPLHIAITRGDTRLVRMLVAFGANVRAIHNEGEAYLHLAALHGHSDIAGLLLDHGANVNALQNGGVTPAHLACRHGHPDVLHRLLLGGALVNLCNKKGKTALHIACRRGNIGAVRLLLRAGADVNAPDAQGCTPIHAAAHIGSTEIVQLLTQCGANLNAMSLCGRSPLHVAAEGGHRHVIAYLLGMGAGQFASDGKGWNPLHYACLQSDRALAMLLVDRGASIEAAGYDGATALHIASGVSNVGLVEFLISRGANVDARDSTGSTPLHWACREKQRETALVLLGYGATVDERDLKGMTPFLLACAEGDRRLAHVLVSHGANVHACAADGSSAMLLACRKGPFDVVEYLLRWGVAAVGGDSSGETPLHAASRRGCLDSVRLLVQRGSDVSARQLDGWTPLHLACGYGHSKVASFLLDNNADINACSAEAYTPLHLACREGMRDIAEALVANGASVIARDINGRTPLALCLSHEHMRPVFFRWQMEYATGVRFTSACAA* # PASA_UPDATE: g13522.t1, single gene model update, valid-1, status:[pasa:asmbl_9985,status:12], valid-1 NODE_916_length_15908_cov_32.4331 . gene 1174 2197 . - . ID=g13522;Name=g13522.t1 NODE_916_length_15908_cov_32.4331 . mRNA 1174 2197 . - . ID=g13522.t1;Parent=g13522;Name=g13522.t1 NODE_916_length_15908_cov_32.4331 . five_prime_UTR 2055 2197 . - . ID=g13522.t1.utr5p1;Parent=g13522.t1 NODE_916_length_15908_cov_32.4331 . exon 1823 2197 . - . ID=g13522.t1.exon1;Parent=g13522.t1 NODE_916_length_15908_cov_32.4331 . CDS 1823 2054 . - 0 ID=cds.g13522.t1;Parent=g13522.t1 NODE_916_length_15908_cov_32.4331 . exon 1174 1436 . - . ID=g13522.t1.exon2;Parent=g13522.t1 NODE_916_length_15908_cov_32.4331 . CDS 1174 1436 . - 2 ID=cds.g13522.t1;Parent=g13522.t1;3_prime_partial=true #PROT g13522.t1 g13522 MAFQRAKGTPRSLNGAGISIGGDAPSSPFSPYGASFSATQQPQSTQAATDALERARAGLEAAMLKDRKLPELQELIGLGAHSAVGVNSTYIKEGPRSVQISPIIPLPEALLEQYDRILIFEVIVQCSFVGLFFRQVLFEKGCVTRTHKHRETYTHAYTHTHIYIY # PASA_UPDATE: g13523.t1, single gene model update, valid-1, status:[pasa:asmbl_9983,status:3], valid-1 NODE_916_length_15908_cov_32.4331 . gene 2588 4768 . + . ID=g13523;Name=g13523.t1 NODE_916_length_15908_cov_32.4331 . mRNA 2588 4768 . + . ID=g13523.t1;Parent=g13523;Name=g13523.t1 NODE_916_length_15908_cov_32.4331 . five_prime_UTR 2588 2613 . + . ID=g13523.t1.utr5p1;Parent=g13523.t1 NODE_916_length_15908_cov_32.4331 . exon 2588 4768 . + . ID=g13523.t1.exon1;Parent=g13523.t1 NODE_916_length_15908_cov_32.4331 . CDS 2614 4563 . + 0 ID=cds.g13523.t1;Parent=g13523.t1 NODE_916_length_15908_cov_32.4331 . three_prime_UTR 4564 4768 . + . ID=g13523.t1.utr3p1;Parent=g13523.t1 #PROT g13523.t1 g13523 MIESAISFLISALPSVKAGSSRHHLHPSPPRVPMLRPAGVNFAFPRGAPTTGTLAAVAGFLALSYVAFSGDPIASSARRVIVGAMFRKGQGKRSREEDGGAGRSNKKHNAGASGDDDTPDPFALQVACAAGSLSEVKKLIERGASLESRDSEANTPLHVACINGHLKIVEHLIYAGADVRAREEDGFTPLHLACRRGDLQIVEKLVAAGADVSVQKKDMWTPLHLASSNENIDVALFLISKGVDVTIRNNKNKTALYLACRRNSIPIVSAILAASKECIDMPSASLETALHVACRKGFKEIADMLVKAGADCSARNKGDATPLHHTCAGGFHEIARILLDAGAPVSSRSEGGWTALHFACRKGDRRIVELLVSKNADVSVSKKDQWTPLHLASSNGHIEIAEILLEKGAEMDARNIKSKTPLHLAALKGHLEISRALIRHGAQMTPRNSKGKTPLHLACRRGYFEIVRLLVEGTKKAEISASDKKQRTPLHIAAKKEHIDTVHLLLKHGASHTALDATLKTPLHYAASEGGDDTVKALVEAGADVLAKESEGWTALHYASRRGKVQMVRLLLEKSADCSLRKGDGWTPLHLACGNGHGKVAVLLLDAGADILARNREGKTSLHMSMKDGMDDVAEVIADQLLKKRLENK* # ORIGINAL: g13525.t1 original gene structure, not modified by PASA NODE_916_length_15908_cov_32.4331 AUGUSTUS gene 11642 15034 . + . ID=g13525;Name=g13525.t1 NODE_916_length_15908_cov_32.4331 AUGUSTUS mRNA 11642 15034 . + . ID=g13525.t1;Parent=g13525;Name=g13525.t1 NODE_916_length_15908_cov_32.4331 AUGUSTUS exon 11642 15034 . + . ID=g13525.t1.exon1;Parent=g13525.t1 NODE_916_length_15908_cov_32.4331 AUGUSTUS CDS 11642 15034 . + 0 ID=cds.g13525.t1;Parent=g13525.t1 #PROT g13525.t1 g13525 MGAAAMSITYKCCVPCPAGKYGIDCAYTCRCSNGASTTCDRFTGACSCTAGFTGFFCEQPCNGATYGVNCANTCTCKNGAICNALTGACTCGAAGWTGTSCDQQCFDGKYGVDCASTCVCENGAPACDKITGACSCTPGWTGVSCTEACLNGRYGTNCAFACACQNNAACDRFTGACSCTAGFKGPTCGDPCTGGTYGVNCVNTCTCKNGAACNAKTGACTCPIGWTGTNCDQACPEGKYGVNCASTCACKNGAGCDRFTGTCTCTAGWMGAACNQACPTGTYGANCVGVCACQNGATCNIVSGTCTCTAGWTGTACSQACPVGKYGLNCVSSCLCQNGAACNNVNGACACGTGWTGTNCDQACPAGKYGVNCASTCACKNGAGCDRFTGTCTCTAGWTGPACDQACASTFYGPNCAGVCACKNDGACDRYTGNCACTPGWGGTYCDQSCISTRYGANCAKTCTCANGAVCDRFVGSCTCTKGWTGIDCNMTCPANCFGANCTSVCNCLNSARCDRFDGCICSEGWTGTFCETACNAARYGPNCMYACDCRNGATCDRFTGACNCTAGWTGARCERECPSKTYGPNCDFECACQNGGMCDRYTGACTCTSGWKNTTCETPCPQGLYGPGCTINCTCQNFATCDRTSGSCTCGSGWRGLDCSDPCPFRTYGSNCVNRCECKQNATCDRVTGRCECSSEYTGVTCEILVASLASQPSVVTGAAVGTGLSVVAIAAGILFFLWNRRRRDGRKRIVAARKELELIDAVVRRPEIVAIELPASAIMFRDKLGEGEFGEVYRADVTLPSSTERIVAAVKTFKISKLQSADEIRSARTAFMAEIDLMRGVPPHPYIIGMLGVCTTTEPNCVVLEFAVHGDLRHYLMVGKSEFTMADFACFCLDIARGMAHLAECGIVHRDLAARNCMVVAGRTVVGTWHASAARAAGATVKIADFGLSRDTSATSDYYRTKTVRKLPVKWMAPESLDRRVYTHASDVWSYGIAMWEVYSRGCKPYPGLENYAVAAYLKENKRMSAPDGCPPSIFAIMESCWRKLPETRPTFEQLCQRVKRAIDGGDSSGKHAKAKCDHDEDDDSVHPVRWFENVAYVDTIPDNVAYMHTIANPLYHDIELSDDVSVV* # ORIGINAL: g13426.t1 original gene structure, not modified by PASA NODE_452_length_23443_cov_42.462 AUGUSTUS gene 9144 11398 . - . ID=g13426;Name=g13426.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS mRNA 9144 11398 . - . ID=g13426.t1;Parent=g13426;Name=g13426.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 10009 11398 . - . ID=g13426.t1.exon1;Parent=g13426.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 10009 11398 . - 0 ID=cds.g13426.t1;Parent=g13426.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 9144 9868 . - . ID=g13426.t1.exon2;Parent=g13426.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 9144 9868 . - 2 ID=cds.g13426.t1;Parent=g13426.t1 #PROT g13426.t1 g13426 MLGRRGDSPNDVAMSASTATDEAGVGGADGLPQSTTTPVIDKGELLSDALSNLSLAEPQKASLTAEGGSESVHTSHDATWVRSLKDAALRQELIKLGQRPGPVVKTTRRTLEIKLMQLLGISEDASSAPKEAQPAIARPPATESPSVSRSTPKREEYFAVRSPVPVRGRALTVCRSLREVEMQAKDVTGATFMKFRTPDDAAQFLASQRAEHDQIASSAHEGLTSQGSAAVSSTLNDATVASATETTATPVPSPRRHRDPRPDHLLNLMRAIRSRDDAQTLELLTSNPRFLMGGEMPTPVHPGTRQTALHMCAELDYAAGCTMILSHLESQEFWMAYAESVSICVVGTGTTVTCEISSETGDRVLVNHVTGLACTPDDIPEWADVASQVVNARTLYTFNTPMHMAVGEGAVAVVRILAGNRHVQLDAVNGQGQTALAMAVERRAGARGASSVAVADQMKSALEQTCFVPLLRSDDAMRAQIGSVVRSPRDLEGVRRASISSPLQDSPSANRRAFQPNTLPQPSSPVVARKLFETPSRQSQLGHFEASTLNVIPSDSTSVSVSVRRMHGDAVSSPLASSSSQLRTDHHSFSPRYTTTPSASSRGAADDMRSPHDSPLRLRAFAGPMTQTCAENFHRTYRTPPSLKDALARELRHLKGADPTRGYEKAGRLLADKMGVQWTQLAIDGSVLNDSPDSPIPMDADVDG* # ORIGINAL: g13427.t1 original gene structure, not modified by PASA NODE_452_length_23443_cov_42.462 AUGUSTUS gene 11723 14114 . - . ID=g13427;Name=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS mRNA 11723 14114 . - . ID=g13427.t1;Parent=g13427;Name=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 13948 14114 . - . ID=g13427.t1.exon1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 13948 14114 . - 0 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 13786 13855 . - . ID=g13427.t1.exon2;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 13786 13855 . - 1 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 13601 13685 . - . ID=g13427.t1.exon3;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 13601 13685 . - 0 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 13054 13198 . - . ID=g13427.t1.exon4;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 13054 13198 . - 2 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 12760 12881 . - . ID=g13427.t1.exon5;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 12760 12881 . - 1 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 12319 12477 . - . ID=g13427.t1.exon6;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 12319 12477 . - 2 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 12053 12141 . - . ID=g13427.t1.exon7;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 12053 12141 . - 2 ID=cds.g13427.t1;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 11723 11905 . - . ID=g13427.t1.exon8;Parent=g13427.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 11723 11905 . - 0 ID=cds.g13427.t1;Parent=g13427.t1 #PROT g13427.t1 g13427 MDPDLATRMFEVGGNLILIGMPEGNEFGIDYNSWTTGPRFKGVKMIPPGLHFVYFSSVSAKEGMTGVRDGFFHWFQEREILVRKWNSQTECVEVDDTLTATFAERGESLREIERYLGPFPMDESMAKWRGFTRFASSRRVYDALFPDDSGALSSITYTEIPRRLPSSGSVAGEDVTRVAMDNTPILQHISRTRYGGDDKCILGELQVAFVAFLIGQSFDAFERWKGLVKLLGFSESAIRESPALFFDFIEVIHFQMKEIPSDFFVDAMSRENFLSVVLRRFFSSLDPSTTEATLYKRAIKFRVHISREFQFDFGDEEEDDADAPTIVSESELNGLSLDD* # PASA_UPDATE: g13424.t1, single gene model update, valid-1, status:[pasa:asmbl_7416,status:12],[pasa:asmbl_7417,status:12], valid-1 NODE_452_length_23443_cov_42.462 . gene 1049 7012 . + . ID=g13424;Name=g13424.t1 NODE_452_length_23443_cov_42.462 . mRNA 1049 7012 . + . ID=g13424.t1;Parent=g13424;Name=g13424.t1 NODE_452_length_23443_cov_42.462 . five_prime_UTR 1049 1243 . + . ID=g13424.t1.utr5p1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 1049 1924 . + . ID=g13424.t1.exon1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 1244 1924 . + 0 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 2056 2415 . + . ID=g13424.t1.exon2;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 2056 2415 . + 0 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 2531 2917 . + . ID=g13424.t1.exon3;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 2531 2917 . + 0 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 3053 3204 . + . ID=g13424.t1.exon4;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 3053 3204 . + 0 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 3296 3754 . + . ID=g13424.t1.exon5;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 3296 3754 . + 1 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 3857 4084 . + . ID=g13424.t1.exon6;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 3857 4084 . + 1 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 4191 4705 . + . ID=g13424.t1.exon7;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 4191 4705 . + 1 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . exon 4844 7012 . + . ID=g13424.t1.exon8;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . CDS 4844 6867 . + 2 ID=cds.g13424.t1;Parent=g13424.t1 NODE_452_length_23443_cov_42.462 . three_prime_UTR 6868 7012 . + . ID=g13424.t1.utr3p1;Parent=g13424.t1 #PROT g13424.t1 g13424 MEGPETSSQQHVPWMAGDGKKQRSIWGRVKDGLFGVLFVMCRDTSSSQWMIVAAMVIDLLQLLEFPMSITHELPWSYGAMHWFASLCNYSNIEYFVRGNEVVFYIALGIVVFIIANVLFVSYLFSRGRLRFLWTLKLLRLVGSAITSVLFIPIVAMLSSRISCEYSPCWSSGDVLALVHKALAIVLGIVFMAFAFIVVATFYEQDPTKKATLSRAHARVDLLFLLAKATLTIIYNVSDNSTNKWVFIASTNVAGIALAVAYTLLLPYHSYHLSVLRACVAWVFEWASLCLLFAALFGHSNSPDVFYMFFITAPGIVLICVMACRMRRNSISSKSVGQLKYVLEVELKVRFYLDDHGLLQTPPAELLDTEAVNAKVVYAAVNDMYVQAAKRFPESPMLRLFWGHFFLIFMGNKGMATAQFDKASSKAPLDVQYVVYRRRMMISDEFSAGSRDVMAFVEFQTHMADAKRSQGKAVRAQLLFWVELMQRSPRLVRLHTISATITKAVTTAQMSYEKLMKINPESSQLLRAYAGFQLNIMNNNYYGEELLDKATEFEAQETEAYTGDDNMQNETARPDPSVNKNRDVDHGPSTVNMAILDDNSASITISGSHRKEGTVLDVNATGCRLLGYRRTELVSRNVTTIIPAPFLITSHTLAIRSYLETGCGTFIMNNEEPRLLPFLHKSGHIVVCHLAVRQLQHSNADTAFFGIIRPVKTDDQFVLLDALGNIFSFTSGLSAVFGISLESVREKSVQLSSWIPGFDVANGNVDKVTQDINGVSYDIRISVANFSWSSTPTDGSTTPKPASKAIFCKLRIKESVTESKLGRGMSQMSSMSMGQGLFRPTDSRRNGSRGDLYNAQAREHSLNAASGPNPTSYWQTGFMAAPRLESSEGVAQGASGCLPPPLLEAEAISGLYCEKRPVSTDTNINFQRVAGQAFAPTDDPKASSSDEETAIEMEAVGEPQLRVGFPGESVKATKTKGRTRSVTSGSQRSSQRSSRTEIDSIRRRIIQQNMELKPSSISRYIVWSFFALLAGAAVIAIVARQVTGKSLTGISDTYSAIVMSSNRRQNAYRVLFEARTLILPNAESFATVQSIPETKAVLIDRANKVAEENNELMNAAVTSQEPDQLALKTQRLLDWMEVSANYKHAVHPMTLTEGIERYTTITTQLALSKNVSLLDENSPDCQEFLYNGLNTLMPLLVRSTSLYQESIKVNLDQSRQAIVATTIAPLAYAAGIIVLFIIPLLIFVESQRNGLMHLMLRIPPSVAVGLYERCRQTFESMSDIDDGLAEDDELFEDDNGIGNIEQLRTGRTSEQQHKAMLAVAYSRSAQIGSIVQMQARGFFRIFIALTPIIVYFIVRYANFEAAVQSVVPAANELEASDLRRYYVYQVNYAAREALIAPSYDIFKKNREALYEGCRGLEDANHRLLYGDSSVDPLPAAQDALMFTDGCVADTPAGCDTFHKGIMKRGLWPAQIEFINVAKRIVDSIENATFPFSETEQIAMAQGADMVDLLKFSILYLRSALIEASTMYQQSQDGKISSYMAEMKIYLGIFITIVALIFIFLVRPFAARLNNEIVRTRMMLLMVPSEVLRELKGAREFIKRQLN* # ORIGINAL: g13428.t1 original gene structure, not modified by PASA NODE_452_length_23443_cov_42.462 AUGUSTUS gene 15068 18100 . - . ID=g13428;Name=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS mRNA 15068 18100 . - . ID=g13428.t1;Parent=g13428;Name=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 17316 18100 . - . ID=g13428.t1.exon1;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 17316 18100 . - 0 ID=cds.g13428.t1;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 16956 17143 . - . ID=g13428.t1.exon2;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 16956 17143 . - 1 ID=cds.g13428.t1;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 16296 16599 . - . ID=g13428.t1.exon3;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 16296 16599 . - 2 ID=cds.g13428.t1;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 15918 16027 . - . ID=g13428.t1.exon4;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 15918 16027 . - 1 ID=cds.g13428.t1;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 15068 15762 . - . ID=g13428.t1.exon5;Parent=g13428.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 15068 15762 . - 2 ID=cds.g13428.t1;Parent=g13428.t1 #PROT g13428.t1 g13428 MGLYHRLFGRSSSVQPISQTQLVVDTVREDAVDAVELLTSRGFVLKRRHSVPTSRFSKFLDSLHKPIERNSRLLRYWAHVYDVVCVYILMIVPFTMAFPYETHTAAWLALDYIANACLLIDMVVIMRTVIRDDYGVQKTDLKDIFAEYRRTWFWPDLLCSIPFDLIPLFLGEYMWWAILRLPRLLRIRPLIKHFLDLRIPGLSKPISRLMKNLIVLLLLSHYDACFFWFVSEHLVDEETSFVNMPMHPKEPGRARDEKLLSKYIYSAHWAMRMIVYNFREMKSEREKLYEVFEFIVGVLLYGSVFGSIASLIRAIDTSSALNEAGEEHNFRMEIIKDYMREKNFPIPLQKKIRDSYEVRWQLNQGMDEANLFLDLPPMLQQSVANFLYMNLVQSVALFKDTDSGFRNALAMSLKPLTVLKSWYIFRQGEEGQEMYFVRKGEVDVMSGDETKTFCTLKEGAFFGEIALFEKGRRTATCKAKTDCNLCVLTRDDFNVIMEKYPSVAEKITLSVAERKERDRKRKEEEEEKKKKDAEDEEQRKKEEAERLEKEEARLAQEEEQRAAEEKEAAEARRRRRSSIPAIIKSLASSRRSSVFPAAADTETASPPGIGSRQPSFVQEVLRKMSESQNSSRKTSTSSSSAHDTLPPITNQKTLVATCSVITERPSATRIPSLNTDSPRDSPSLRRESRQMDK* # ORIGINAL: g13429.t1 original gene structure, not modified by PASA NODE_452_length_23443_cov_42.462 AUGUSTUS gene 18868 22899 . - . ID=g13429;Name=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS mRNA 18868 22899 . - . ID=g13429.t1;Parent=g13429;Name=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 22510 22899 . - . ID=g13429.t1.exon1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 22510 22899 . - 0 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 21600 22296 . - . ID=g13429.t1.exon2;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 21600 22296 . - 0 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 21209 21329 . - . ID=g13429.t1.exon3;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 21209 21329 . - 2 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 20696 20778 . - . ID=g13429.t1.exon4;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 20696 20778 . - 1 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 20512 20555 . - . ID=g13429.t1.exon5;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 20512 20555 . - 2 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 20112 20221 . - . ID=g13429.t1.exon6;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 20112 20221 . - 0 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 19755 19940 . - . ID=g13429.t1.exon7;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 19755 19940 . - 1 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 19594 19665 . - . ID=g13429.t1.exon8;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 19594 19665 . - 1 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 19460 19487 . - . ID=g13429.t1.exon9;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 19460 19487 . - 1 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 19277 19350 . - . ID=g13429.t1.exon10;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 19277 19350 . - 0 ID=cds.g13429.t1;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS exon 18868 19132 . - . ID=g13429.t1.exon11;Parent=g13429.t1 NODE_452_length_23443_cov_42.462 AUGUSTUS CDS 18868 19132 . - 1 ID=cds.g13429.t1;Parent=g13429.t1 #PROT g13429.t1 g13429 MNGGVCADGRSGAGTCDCAAVLGFSGKTCNDSCETLTPSRFGLGCSQLCGCKNGRCDPNNGVCTCASGWSGTLCDLVIPPSAPIVTIVSASGSEILLSWTHPEDVSGAAKVWLPWSYSIERVGCPNVQFPLQSGTTFRDTAVDPNVKYLYTIIAINKLLAKSPSVDTERVTATKKKPPATPTSVTATPTVSVKKLTAIQLTWVEDRSSGDISNTTIYRNDVLIFNGTIGPSFTDFSVVPNAVYVYEIVSANEYGVSPRGKSETVTAVDFGGNPQTTNAPVTDASSGKSSNVTAAVAGSLGAVFGVAALGVVALLVFRRHKRMKKHQLAMEEMDLIDTVVRRPEIAEIQIPGSCIILRDRIGEGEFGEVYRADVTLGDRKLQAAVKTFKVTHFATVDDVRTARSAFMLEIDVMRSVPKHQNVIALLGVSLDEPNCCVLEFAAHGDLRHYIMESKGVTAADMTCFAIDVANGMAHLEKNGIIHRDLAARNCMCVAGPRPSNPRESYWRLSPKGNVCVKIADFGLSKDNSDNDYYRAKTSRKMPIKWMAPESLERRIFTHSTDVWSFGIVVWEIFSKGSKPYPGLENHQVLDFLNSGKRMTVPQNCPARIVDVMQSCWKKHAETRPSFSDLVGRLEKGMADLHGRGVQSSNSTVRVTSNPVQRTFDPDSSFGTDDPVTSTSEYADYDPASDA* # PASA_UPDATE: g13425.t1, single gene model update, valid-1, status:[pasa:asmbl_7415,status:12], valid-1 NODE_452_length_23443_cov_42.462 . gene 7193 8911 . + . ID=g13425;Name=g13425.t1 NODE_452_length_23443_cov_42.462 . mRNA 7193 8911 . + . ID=g13425.t1;Parent=g13425;Name=g13425.t1 NODE_452_length_23443_cov_42.462 . five_prime_UTR 7193 7263 . + . ID=g13425.t1.utr5p1;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . five_prime_UTR 7475 7576 . + . ID=g13425.t1.utr5p2;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . exon 7193 7263 . + . ID=g13425.t1.exon1;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . exon 7475 7807 . + . ID=g13425.t1.exon2;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . CDS 7577 7807 . + 0 ID=cds.g13425.t1;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . exon 8173 8276 . + . ID=g13425.t1.exon3;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . CDS 8173 8276 . + 0 ID=cds.g13425.t1;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . exon 8588 8911 . + . ID=g13425.t1.exon4;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . CDS 8588 8672 . + 1 ID=cds.g13425.t1;Parent=g13425.t1 NODE_452_length_23443_cov_42.462 . three_prime_UTR 8673 8911 . + . ID=g13425.t1.utr3p1;Parent=g13425.t1 #PROT g13425.t1 g13425 MMSLRSVLSAGRVLVRRQLPRRSASSGHGHGEAHAEHGHGHGHGDSHMPEWERRHLELLSKSPKGWEPPNGFLFNEKPGPRKWQWWEGHWYFGYYLPLAAFIVLAFSLPDPGLRTWARLTALERLAEKEGKAEESAADE* # PASA_UPDATE: g12704.t1, single gene model update, valid-1, status:[pasa:asmbl_2724,status:12],[pasa:asmbl_2725,status:12], valid-1 NODE_1824_length_9055_cov_28.5306 . gene 8038 9055 . + . ID=g12704;Name=g12704.t1 NODE_1824_length_9055_cov_28.5306 . mRNA 8038 9055 . + . ID=g12704.t1;Parent=g12704;Name=g12704.t1 NODE_1824_length_9055_cov_28.5306 . five_prime_UTR 8038 8106 . + . ID=g12704.t1.utr5p1;Parent=g12704.t1 NODE_1824_length_9055_cov_28.5306 . exon 8038 8385 . + . ID=g12704.t1.exon1;Parent=g12704.t1 NODE_1824_length_9055_cov_28.5306 . CDS 8107 8385 . + 0 ID=cds.g12704.t1;Parent=g12704.t1 NODE_1824_length_9055_cov_28.5306 . exon 8525 9055 . + . ID=g12704.t1.exon2;Parent=g12704.t1 NODE_1824_length_9055_cov_28.5306 . CDS 8525 9055 . + 0 ID=cds.g12704.t1;Parent=g12704.t1;3_prime_partial=true #PROT g12704.t1 g12704 MRMASSAVAPMPEEGGAKFTVVQRDAAGWKVLAVLTFCLAVPALIIAVYTYENPPKLSDAVAGSFEVSTVNGSKVVSLALGDADAPFALKGQKDQPLKLDKANVSLVTFDSSGTQFNTPTSFGGDIAVNTPASRRRGAGKVFSVDVKTGNTDIGGNLTVAENIKVLGSIDVNAGKVVINSATGNTAIKGDVAVNSDKFKITASSGKTEIAGDVAVATDKFTIASASGNTAIKGDVAVNSDKFKITASSGKTEIAGDVAVATDKFTIASAS # ORIGINAL: g12703.t1 original gene structure, not modified by PASA NODE_1824_length_9055_cov_28.5306 AUGUSTUS gene 178 3291 . - . ID=g12703;Name=g12703.t1 NODE_1824_length_9055_cov_28.5306 AUGUSTUS mRNA 178 3291 . - . ID=g12703.t1;Parent=g12703;Name=g12703.t1 NODE_1824_length_9055_cov_28.5306 AUGUSTUS exon 178 3291 . - . ID=g12703.t1.exon1;Parent=g12703.t1 NODE_1824_length_9055_cov_28.5306 AUGUSTUS CDS 178 3291 . - 0 ID=cds.g12703.t1;Parent=g12703.t1 #PROT g12703.t1 g12703 MKWTFFDNTTGLHAGFAWLGTGSFVSRVRVEQFLRELDILELSENSRGLADLYFSIWANEIPATLISLLNQTALDTGRAFSAVGCDDCADRQRMNTVARMDAVKRLQERLSIPDDNVFNRNFLSGDFREYPIKAACANDECLFLTNMDPLPSLVFATKTDFNSLEDQNSKGWVVPRRSLAFREAVDGSDGTAWTLPRLPSYGDFFGLDLLFGQAVSGIRLVASHFNPEDFAVDASCSSSDGWVRKRFMVSSEPLLEGSERQVFIFRPVENVLGLRSFRLRWVQPLPAARAPSIYDVSAVVPLTKGGLKSARVLFVLTEIPNIGVDAAPSLSLVLLSRAEVLANTSGATVSVLFASVISADNAALRELRVRLERMGISFSVLPSAPPQTTSGPPTPLALLSASMLDWLEQQAKPFSIVHFSAYQSIMVLALQSRRVGLSFANTIFVAHGVPLTIMRRTRTGQFTTSAADVVATYLERRSLELAQVVVLPLHSVREQFADEGFDLDAPARELRGRPAEVFIVPPLVFREKRLDFGTTRQTHTELFAEAVVICDDSTTLIAMRILQNAISSLQQSVVVLRRDIVQVTITVVTAAAFERLEPVLIGLQTPEDSSGIVLSVLVQQLSYRQAIRHILESPRRFLCVLQGPLENGVLVADAFEKRISFVAPISFAELIPVGSRSSVLFDEESSSDLARVLLAFFARTSSDVSKTVMFDEEGQREQWITFNILLFARRGFAEFASVKSALTLFENSDTTPLVSVCIATRNRGRMLEAAVESVLASDFPASRMEIVIVDDHTDSESDLEVLRRVASMLLGRGIVTMNPGRGGISARNHAARVAKGALLFFFDDDDLLRPRTLTVLVNAMETTKADVVGGWIHTFMNPSPASDDEEVPITIHPMARRSRWVTIGGNVTACFFSNCFFVAGALHRREAFEKVGGWRAAPEGTAHQDYELFMREAVAGFRLELVPAIIYDYRRHSKKRGGSVDGARREIEGGVLKASVSTFRNRMHSLRPLLESYPEWRDILLFAFGNSDMRFSGNNDV* # PASA_UPDATE: g8416.t1, single gene model update, valid-1, status:[pasa:asmbl_4569,status:12], valid-1 NODE_2569_length_5848_cov_41.8476 . gene 262 2218 . - . ID=g8416;Name=g8416.t1 NODE_2569_length_5848_cov_41.8476 . mRNA 262 2218 . - . ID=g8416.t1;Parent=g8416;Name=g8416.t1 NODE_2569_length_5848_cov_41.8476 . five_prime_UTR 2173 2218 . - . ID=g8416.t1.utr5p1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 1695 2218 . - . ID=g8416.t1.exon1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 1695 2172 . - 0 ID=cds.g8416.t1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 1503 1543 . - . ID=g8416.t1.exon2;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 1503 1543 . - 2 ID=cds.g8416.t1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 1121 1249 . - . ID=g8416.t1.exon3;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 1121 1249 . - 0 ID=cds.g8416.t1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 914 990 . - . ID=g8416.t1.exon4;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 914 990 . - 0 ID=cds.g8416.t1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 662 732 . - . ID=g8416.t1.exon5;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 662 732 . - 1 ID=cds.g8416.t1;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . exon 262 334 . - . ID=g8416.t1.exon6;Parent=g8416.t1 NODE_2569_length_5848_cov_41.8476 . CDS 262 334 . - 2 ID=cds.g8416.t1;Parent=g8416.t1;3_prime_partial=true #PROT g8416.t1 g8416 MASTALFLVAFVACVATSALSMPLGGDNATVTATVYYDASKGAYSIVKGTYDTAKGVAVATYEDGTETTGWGVLRVRTLPGHDDAVQMRAAGYAEGALTAHRIFQHYANMWAVYFTKKEDETPVRGFFTAQDKWTRSNIAKNERDPFWQHIGLVTAQYDGLVQGYAENHADGEDLELFAFQVLNAAGDLLDLQTALSPSATEPYPADMPKDEVRQKFAKSGHCSAFIKITPGFEDLFMAHSSWFVYAAMLRIYKHYSFSLANPATGAQKVSFSSYPGFLESLDDFYIMD # ORIGINAL: g8417.t1 original gene structure, not modified by PASA NODE_2569_length_5848_cov_41.8476 AUGUSTUS gene 3258 5080 . + . ID=g8417;Name=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS mRNA 3258 5080 . + . ID=g8417.t1;Parent=g8417;Name=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS exon 3258 3349 . + . ID=g8417.t1.exon1;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS CDS 3258 3349 . + 0 ID=cds.g8417.t1;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS exon 3641 3767 . + . ID=g8417.t1.exon2;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS CDS 3641 3767 . + 1 ID=cds.g8417.t1;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS exon 4041 4096 . + . ID=g8417.t1.exon3;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS CDS 4041 4096 . + 0 ID=cds.g8417.t1;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS exon 4330 4519 . + . ID=g8417.t1.exon4;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS CDS 4330 4519 . + 1 ID=cds.g8417.t1;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS exon 4844 5080 . + . ID=g8417.t1.exon5;Parent=g8417.t1 NODE_2569_length_5848_cov_41.8476 AUGUSTUS CDS 4844 5080 . + 0 ID=cds.g8417.t1;Parent=g8417.t1 #PROT g8417.t1 g8417 MAEIVHGQAFECGERYADLQYIGEGAYGMVVSALDTVMNRRVAIKKISPFEHQTYCQRTLREIKLLTRFNHENVIAIYDFIKPKSFEECKDVYIVQELMETDLYKLLKTQALSNDHTCYFVYQILRGMKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARVADPGVNAGLMTEYVATRWYRAPEIMLNSKAYTKASILLLAPRLPVAQTARWVWMCRARAVFIICVLISV* # PASA_UPDATE: g14241.t1, single gene model update, valid-1, status:[pasa:asmbl_5785,status:12], valid-1 NODE_3255_length_3909_cov_38.2806 . gene 2 3391 . + . ID=g14241;Name=g14241.t1 NODE_3255_length_3909_cov_38.2806 . mRNA 2 3391 . + . ID=g14241.t1;Parent=g14241;Name=g14241.t1 NODE_3255_length_3909_cov_38.2806 . five_prime_UTR 2 3 . + . ID=g14241.t1.utr5p1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 2 729 . + . ID=g14241.t1.exon1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 4 729 . + 0 ID=cds.g14241.t1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 1096 1318 . + . ID=g14241.t1.exon2;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 1096 1318 . + 0 ID=cds.g14241.t1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 1532 1659 . + . ID=g14241.t1.exon3;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 1532 1659 . + 2 ID=cds.g14241.t1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 1969 2052 . + . ID=g14241.t1.exon4;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 1969 2052 . + 0 ID=cds.g14241.t1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 2379 2561 . + . ID=g14241.t1.exon5;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 2379 2561 . + 0 ID=cds.g14241.t1;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . exon 3080 3391 . + . ID=g14241.t1.exon6;Parent=g14241.t1 NODE_3255_length_3909_cov_38.2806 . CDS 3080 3391 . + 0 ID=cds.g14241.t1;Parent=g14241.t1 #PROT g14241.t1 g14241 MGGGGPPPPPPPMGGPGGPPPPPPGPGGPRGPPGPPGAPGMGAPGLPAKRVIKPNVKLRPFHWTKIPNNTIPKTIWAKSNDENRKFDAAALEDMFGLEDKGDAKPKVKKEKAEVKTLLDFKRAQNVGIFLSGFKMPLDQLDGKLSTLDPEKSLPMEHIIALKKLAPTPEEIEQFKNYKGDRSELAPADQFLIRLAEVSNLMARLDMQISVKELPGRTDELAPEVDRALGACLELKGGEKFPKVLEYVLAIGNYVNGSTPRGGAYGVRLDSLLKMAEAKGRDRKYNLVYFLYDTLALHDSNLIKFVEEFVCVEESKTASVKAIAAEVDLLKKDMAKIRTNAKGMLEKATPADKKFIEDVESFCKRYQQKLDSIAVKSDEMLKLFKEVLAMFGEPPTLDSEELFGNVAYFVQRFRTVLEEKQPGAVDKNAKPKRTVDTSKVSSSAESNTNKPSASDGKTSSSSSGQASGGSGDKSNKTAGGSVEATGSSAPEGGAAAAAGGAQQNVSGQGHPLNSNAGYASRTASASGRPMSVRIPCCDCHFLCICGVHGHSA* # PASA_UPDATE: g5171.t1, single gene model update, valid-1, status:[pasa:asmbl_6920,status:12], valid-1 NODE_4068_length_2247_cov_35.075 . gene 191 1012 . + . ID=g5171;Name=g5171.t1 NODE_4068_length_2247_cov_35.075 . mRNA 191 1012 . + . ID=g5171.t1;Parent=g5171;Name=g5171.t1 NODE_4068_length_2247_cov_35.075 . five_prime_UTR 191 191 . + . ID=g5171.t1.utr5p1;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . exon 191 382 . + . ID=g5171.t1.exon1;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . CDS 192 382 . + 0 ID=cds.g5171.t1;Parent=g5171.t1;5_prime_partial=true NODE_4068_length_2247_cov_35.075 . exon 567 626 . + . ID=g5171.t1.exon2;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . CDS 567 626 . + 1 ID=cds.g5171.t1;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . exon 780 1012 . + . ID=g5171.t1.exon3;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . CDS 780 786 . + 1 ID=cds.g5171.t1;Parent=g5171.t1 NODE_4068_length_2247_cov_35.075 . three_prime_UTR 787 1012 . + . ID=g5171.t1.utr3p1;Parent=g5171.t1 #PROT g5171.t1 g5171 GTVVDSGTFIDRSGGFASGTFIDRSATSGGSESGTFVQKGGPSDTVEQLRDKFLPMWLGKDGGSGTPGASEVNKRPPANVREELI* # ORIGINAL: g8509.t1 original gene structure, not modified by PASA NODE_1022_length_14601_cov_70.136 AUGUSTUS gene 2477 6202 . - . ID=g8509;Name=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS mRNA 2477 6202 . - . ID=g8509.t1;Parent=g8509;Name=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 5131 6202 . - . ID=g8509.t1.exon1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 5131 6202 . - 0 ID=cds.g8509.t1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 4827 4888 . - . ID=g8509.t1.exon2;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 4827 4888 . - 2 ID=cds.g8509.t1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 4113 4224 . - . ID=g8509.t1.exon3;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 4113 4224 . - 0 ID=cds.g8509.t1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 3649 3938 . - . ID=g8509.t1.exon4;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 3649 3938 . - 2 ID=cds.g8509.t1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 3181 3512 . - . ID=g8509.t1.exon5;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 3181 3512 . - 0 ID=cds.g8509.t1;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 2477 3029 . - . ID=g8509.t1.exon6;Parent=g8509.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 2477 3029 . - 1 ID=cds.g8509.t1;Parent=g8509.t1 #PROT g8509.t1 g8509 MAIPQSSDDELDQLALELRKAIETSACDDDAFSLVQSMSGWSEATVGDAMVSAEEHRRAIFGPASVRRPPGYADAAVDEAASRGFRLTCVFLFQCARESTDDRCLRDMQAAIGTAVRSAVYPSPDVNMFSCILDTFLGATDASADAFDASIYPAISRALRPTPVYICTVACEAPDLVAHLLECMNVVLSYIEIVGVDEHAVKEAVNCPDECGLSALHYAAWTKDDKGLQIAEILLANGADPLIKSQKPSSPDICTPRRRSSTLARVVSGSSAVSAISGDRVASEDEVTHEPCVGDYDVNPYDVGGNTSIHMAAAANNCDMAARLLKAAKKSCAGELTLCHLLNDYGDLPTDIKNDTFRDGLAELSLCPACFTKPSHPKVGSRGKGTYTWSSDLDLRLDFKCLPTQLIKLRHVILRALAERIGGDTQHGLGFKVARITGWVLTMSTDPCVTVDVVITIENLDKLFLDNNLSSLDRRLLSDWLRPARLVQAQIEFEAIRGMSLNKKLQTVGLKQLFGGIVSSCFLEHFSRVFSDRIEKKIASLECTLISLAMEPDNIEASSDTGGRAQSDVDASRVRIGTNGFIPNAENRECSPVVQVSEEVFVLKEMPLLAALSILCETEQPSEIRLPNGELLAGPAQLSSAKYKDVRATAISLLEARVEKIKRMCKEEKNRIASLKIDPVADTQHATPATGGAPESNSETDGEVSAKLHLAHLDKVGQQDISLSQIARLEGFIARIDTAFHDATHPPVTHPTDLRALPGRTEQLANVARLPSSVLDDVSKQSLSQIAPAVHTPSSSPLTPVTHGQS* # ORIGINAL: g8511.t1 original gene structure, not modified by PASA NODE_1022_length_14601_cov_70.136 AUGUSTUS gene 7487 8901 . - . ID=g8511;Name=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS mRNA 7487 8901 . - . ID=g8511.t1;Parent=g8511;Name=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 8748 8901 . - . ID=g8511.t1.exon1;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 8748 8901 . - 0 ID=cds.g8511.t1;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 8506 8584 . - . ID=g8511.t1.exon2;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 8506 8584 . - 2 ID=cds.g8511.t1;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 7669 7750 . - . ID=g8511.t1.exon3;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 7669 7750 . - 1 ID=cds.g8511.t1;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 7487 7552 . - . ID=g8511.t1.exon4;Parent=g8511.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 7487 7552 . - 0 ID=cds.g8511.t1;Parent=g8511.t1 #PROT g8511.t1 g8511 MARHVTVAGIDAFFAAVEQARAATPAARIFALFSGDVDSGTGQSWCPDCVAAEPVISKAFESASDAILIKCNVGARPEWKSPSSPFRTHPQLKLTGIPTLIRWGTPSRLGPDDCAKADLVDMLLED* # PASA_UPDATE: g8508.t1, single gene model update, valid-1, status:[pasa:asmbl_78,status:12], valid-1 NODE_1022_length_14601_cov_70.136 . gene 1 1220 . - . ID=g8508;Name=g8508.t1 NODE_1022_length_14601_cov_70.136 . mRNA 1 1220 . - . ID=g8508.t1;Parent=g8508;Name=g8508.t1 NODE_1022_length_14601_cov_70.136 . five_prime_UTR 1193 1220 . - . ID=g8508.t1.utr5p1;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . exon 1017 1220 . - . ID=g8508.t1.exon1;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . CDS 1017 1192 . - 0 ID=cds.g8508.t1;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . exon 518 744 . - . ID=g8508.t1.exon2;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . CDS 518 744 . - 1 ID=cds.g8508.t1;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . exon 1 296 . - . ID=g8508.t1.exon3;Parent=g8508.t1 NODE_1022_length_14601_cov_70.136 . CDS 1 296 . - 2 ID=cds.g8508.t1;Parent=g8508.t1;3_prime_partial=true #PROT g8508.t1 g8508 MAMSCVSQRWVTLAGCLASVALVFMTQQTGASDTAGEAASRLLRVRGDGTFKIAQFADLHYGEGENVPWGGEQDANSTRVMRRMIVDERPDFVVFSGDQITGNNIHDNATRYWASVVAVCVEYNVPWAIIFGNHDDLADGKGGARKDLLAFDMAFPLSHSRVGPADIDGLSNFVLHVHGRHGQKGWDLFFLDSGGGSLAEIVSESQVAWYKNTSLLLLDARNGDPWPSLAFFH # PASA_UPDATE: g8512.t1, single gene model update, valid-1, status:[pasa:asmbl_79,status:12],[pasa:asmbl_80,status:12], valid-1 NODE_1022_length_14601_cov_70.136 . gene 9276 14378 . + . ID=g8512;Name=g8512.t1 NODE_1022_length_14601_cov_70.136 . mRNA 9276 14378 . + . ID=g8512.t1;Parent=g8512;Name=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 9276 9401 . + . ID=g8512.t1.exon1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 9276 9401 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 9493 9849 . + . ID=g8512.t1.exon2;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 9493 9849 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 9976 10842 . + . ID=g8512.t1.exon3;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 9976 10842 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 11322 11959 . + . ID=g8512.t1.exon4;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 11322 11959 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 12086 12518 . + . ID=g8512.t1.exon5;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 12086 12518 . + 1 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 12659 12817 . + . ID=g8512.t1.exon6;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 12659 12817 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 12947 14058 . + . ID=g8512.t1.exon7;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 12947 14058 . + 0 ID=cds.g8512.t1;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . exon 14162 14378 . + . ID=g8512.t1.exon8;Parent=g8512.t1 NODE_1022_length_14601_cov_70.136 . CDS 14162 14378 . + 1 ID=cds.g8512.t1;Parent=g8512.t1 #PROT g8512.t1 g8512 MAPAASAAVPVSDSVLDFWKDKLSNLPFMQLPTDYPRPVKQQIVEAEEHLDFSEATCMGVLRHSLTANVKPFTAVLAAFSVVLQKYTREEDIVIGTSSSNFNPLVFRVSVSRGVSLADLVLHCKDVEESALANDIPFDRLLSHLKLAASNDRDTSLTSLFQVRFFNVVDVSSQTLESTSCDWTVYLEQTGDAKRLLPLRLRIIYNTVLYSRERVQETLRQTEHVLCAIFSSPQAKLAEVSLLTPASKNILPDPLGALDKTWFGSIQDRFAERASVHPGRVAVVYGKEEYLYGFLNETSSRVANYLLSHGIQREDVVALYAHRSPALVVAIIGILRAGATFTVIDPAYPAQRQIIYLSVAKPRGILSLALAGAISDEVQSYITKEVQPLCQMNALSVTDLGELTAFSTADPKIEVGPDSVGTLSFTSGSTGVPKGVRGRHISLTHFYPWMSEEFGLSENDRFTMLSGIAHDPIQRDVFTPLFLGAQIRIPFADDIANPGQLARWMAENRCTVTHLTPAMGQLLSANADAQMKDLRMAFFVGDVLTKRDVMRLQALAPAVTVINMYGTTETQRAVSFLAVPNDPSIERRKEILPSGRGMKDVQLLVLSDAGGIAGVGELGELYVRSPHLAKGYLGLPDQTAEKFLQNPFSKDSEDRLYRTGDIGRYMPDGTVECVGRADDQIKVRGFRIELGEITTYLSQHPHVRENVTLVRRDANEEQTIVSYFVAAVPEYDIASMRDFLRTKLPAYAIPSVFFPLQRMPLTPNGKIDKNKLPFPDAAAVLSLQSRPSNSALRTLSPLERELMQIWEQVLGRPVGVEDNFFDVGGHSILATRLTFQMRQKLRKQLPLNLLYQYPTIQGIAQTIVECERDPTADLQTSSRDYAESLCLADEVRLDVSVTAEGKAAAVTSNSPSGIFLTGATGFLGCFLVAELVRRYPRTTVICLVRGASDSAATVRLHKSLEAHMLWREEMATQVEVVVGDLGEPRFGLTEDEFGRLADRVDVMFHNGALVHWVYPYSKLKPMNVLATEEALKLACYGKRLRPLHFISSTSVFDAPEYLRRSSPVPEDDNLDGAVGLSVGYAQSKWVAEKLVFAARDRGVPVTVFRPGYIVGDSQKGVMNVDDYLVRLIKGCIQLGAVPVMRNRVNMCPVDFVAQAVVHAASLPASIGRAFHVYNPHTFRFSNLFDALRDFGYPLRFLEYVEWREELMKLTLESKNNALYPLMHFVLDDLPTRSKSPKLDFANLSQALADSGIVCPSMQSHLPTCVSYLVACGYIEFPPNGGTLSLTTSVRSLGLLTRSDRAMD* # ORIGINAL: g8510.t1 original gene structure, not modified by PASA NODE_1022_length_14601_cov_70.136 AUGUSTUS gene 7118 7431 . + . ID=g8510;Name=g8510.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS mRNA 7118 7431 . + . ID=g8510.t1;Parent=g8510;Name=g8510.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 7118 7239 . + . ID=g8510.t1.exon1;Parent=g8510.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 7118 7239 . + 0 ID=cds.g8510.t1;Parent=g8510.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS exon 7353 7431 . + . ID=g8510.t1.exon2;Parent=g8510.t1 NODE_1022_length_14601_cov_70.136 AUGUSTUS CDS 7353 7431 . + 1 ID=cds.g8510.t1;Parent=g8510.t1 #PROT g8510.t1 g8510 MVKTTTDVSHGMRRIEITCATCDGHLGHVFEGERFTETNERHCVNSISVKFVKEDPPAGLKEEKAV* # ORIGINAL: g10826.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 14454 17015 . - . ID=g10826;Name=g10826.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 14454 17015 . - . ID=g10826.t1;Parent=g10826;Name=g10826.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 14454 17015 . - . ID=g10826.t1.exon1;Parent=g10826.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 14454 17015 . - 0 ID=cds.g10826.t1;Parent=g10826.t1 #PROT g10826.t1 g10826 MGDEALRLAYLRQALSLHDMASPGTASASYTAVDGVVHPACLICAEHTLCRDECPNAPRMVDLRATFNYLCASAGGTAPPVRASRAAIEAGLASLREATPAAFPGELYAHMLSAERQHDWSARSIVDIIVGREDWVRAVVASYTDELDEKRRVIGQRALDAFFSGSFARLMRSDLAVINNAIEDIDPAEVDLATRGDIAKLLVLVIALYSAMDKVSESREMAARQSLEREEAPDSWGVNVDHVENGPAHPAPRDGALTLVCASSRRPGTDFTADPRALRRACEASFAAQGVRIPPEDESGSKVGGEGGDGDDEDDGGELDDGNGGVAALDAQGNLAALVGFAFADNMDVAVTVHVAPGSGLDVGRLQADLVRSLALALPTDGNPVATCSIRHYRTEGAVGGYVLETATGCSASAWDSQGRAVDFSTKFVLRLAHDETRDGYPRLARGTAVARALLCYRNGEMSMFGPTLEHLCVRRDMRRRGLGRLLMGCVEEFVLRSWFPTLPSALLQATYVTGGQGFFRRMGFRFVDEPLYEEAQKELGRSFACTCRGCIGGCLSPRMRFRLMQEADWQHVTLSDAVTDALVDAEADGTPETDAAVDGEELPLSARFLPSMGPLVPANVIRGYASIFAALHAFLENGHVLPDARNVREVCMSHGRGRRGAGDGRTAAIAAFEAASGRVEDAIAALVDITEEQSTGQTESDFLVNFGDDLAALPECAHDGCYRAVRVLLAGMSAPSRRPHAGYSDGMDMDGEGGGLLNTSAHGLMAALAGMARARVGEDTGDDGDDVDGAADDGDGGVEEAWTSSNASLVARIVQGAMRGVRPPVSSVQAAVPSTTASTANADNHVRDEPLD* # PASA_UPDATE: g10829.t1, single gene model update, valid-1, status:[pasa:asmbl_7366,status:12], valid-1 NODE_449_length_23508_cov_42.8676 . gene 20962 23356 . - . ID=g10829;Name=g10829.t1 NODE_449_length_23508_cov_42.8676 . mRNA 20962 23356 . - . ID=g10829.t1;Parent=g10829;Name=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 23183 23356 . - . ID=g10829.t1.exon1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 23183 23356 . - 0 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 22935 23017 . - . ID=g10829.t1.exon2;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 22935 23017 . - 0 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 22452 22613 . - . ID=g10829.t1.exon3;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 22452 22613 . - 1 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 22099 22194 . - . ID=g10829.t1.exon4;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 22099 22194 . - 1 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 21703 21772 . - . ID=g10829.t1.exon5;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 21703 21772 . - 1 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . exon 20962 21401 . - . ID=g10829.t1.exon6;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . CDS 21249 21401 . - 0 ID=cds.g10829.t1;Parent=g10829.t1 NODE_449_length_23508_cov_42.8676 . three_prime_UTR 20962 21248 . - . ID=g10829.t1.utr3p1;Parent=g10829.t1 #PROT g10829.t1 g10829 MPHADNWPNRSHFTLNQVHVDGARAIARACRNAGVERLIHISALGASIASPSRFLRTKALGEEAVREEFPAATILRPGTLTGKEDRFLNRYAQYATLPFGVPLGNAEAKRSPVYVVDAAQAVINAFKEPATLGRTYELAGPKSYTMNEVVHLVSAFTRRHPVAYSIPKPFYVFGGRLLGMNPVFRPLLTEDQAIRDTLDEVTTADAPGLEDLGVLPTPIEKIALGILRRYRTALHFQESVDEVKL* # ORIGINAL: g10823.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 596 3719 . + . ID=g10823;Name=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 596 3719 . + . ID=g10823.t1;Parent=g10823;Name=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 596 1255 . + . ID=g10823.t1.exon1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 596 1255 . + 0 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 1483 1656 . + . ID=g10823.t1.exon2;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 1483 1656 . + 0 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 1778 1880 . + . ID=g10823.t1.exon3;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 1778 1880 . + 0 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 2035 2153 . + . ID=g10823.t1.exon4;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 2035 2153 . + 2 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 2250 2396 . + . ID=g10823.t1.exon5;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 2250 2396 . + 0 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 2510 2666 . + . ID=g10823.t1.exon6;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 2510 2666 . + 0 ID=cds.g10823.t1;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 3139 3719 . + . ID=g10823.t1.exon7;Parent=g10823.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 3139 3719 . + 2 ID=cds.g10823.t1;Parent=g10823.t1 #PROT g10823.t1 g10823 MCPMPRRATKRGVAGSAALLLLGVLSLLIAADAQSTSLSASASLSASASLSTSASLSASASLSASASLSASASLSASASLSEANAETTSEVDAVATATPSPSSLSSAPIASSVTSTAAAASPTATTPALPTATLPIIWPDVTPVNPAIDYESNIGVCMCDLTLNACDANCCCDRDCAPADIAVFSGCDVATAYDDEHVCMSNRLLVYANVQSSKKRPANGALCIAKDNNPSRMYFAAPATLTTVAQIGSALGLGVWYSFVDVASSGAPPKSLALSAYKVGDSVRVVYGTGLSGVLSLPSATLTGLCSVGPAAEYFRSNTSSCLRSFESVVTACAAGTSLDAAIYYARVSVVKDAAISATGANLLVITASCVRSDGSACAGGGVPSPFFNSSTLFCENAVAKVAYVFGFEGSTITSAAVTVVVGAVDAANTLVSQSFSVDFEQVGIERAAARVVCCALPLGAVSAGANCNAMRAAAVAFLQGYAAQASQVARFGNSSYLNSFDWIEIVNPGFPTSSAGRDSATTCADVLTGMELQVLTTRAGSIANPQWAIVGARFAYSLTDVDVDCGNAECSGAGLLQVSAAVRFVDSTPRGSDFKPPAPDVLPKFPHDFFYPFFSDGSGSLSAPSPLLTAAVSLACVLCLMLAMR* # PASA_UPDATE: g10825.t1, single gene model update, valid-1, status:[pasa:asmbl_7370,status:3], valid-1 NODE_449_length_23508_cov_42.8676 . gene 9535 14223 . + . ID=g10825;Name=g10825.t1 NODE_449_length_23508_cov_42.8676 . mRNA 9535 14223 . + . ID=g10825.t1;Parent=g10825;Name=g10825.t1 NODE_449_length_23508_cov_42.8676 . five_prime_UTR 9535 9761 . + . ID=g10825.t1.utr5p1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 9535 9852 . + . ID=g10825.t1.exon1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 9762 9852 . + 0 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 10049 10267 . + . ID=g10825.t1.exon2;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 10049 10267 . + 2 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 10371 10502 . + . ID=g10825.t1.exon3;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 10371 10502 . + 2 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 10764 11636 . + . ID=g10825.t1.exon4;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 10764 11636 . + 2 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 11823 12021 . + . ID=g10825.t1.exon5;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 11823 12021 . + 2 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 12262 12515 . + . ID=g10825.t1.exon6;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 12262 12515 . + 1 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 12751 12947 . + . ID=g10825.t1.exon7;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 12751 12947 . + 2 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . exon 13099 14223 . + . ID=g10825.t1.exon8;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . CDS 13099 14031 . + 0 ID=cds.g10825.t1;Parent=g10825.t1 NODE_449_length_23508_cov_42.8676 . three_prime_UTR 14032 14223 . + . ID=g10825.t1.utr3p1;Parent=g10825.t1 #PROT g10825.t1 g10825 MAARASFERGMPPLLNDPVLQNVLSKRDYDVFFVLDAMRAGFPVVHASDEFCSQMCYASSEIVGKAFDFMAGPDTNPDIMEDMRLALCDGREFSAKFLHYDGNGYPFLNTLTVNPVRVAFGEIKYFIIVLRDFDATRTEVGTARQLTAYQMWRRKSCFSFMRMVPQMVKSKFRRTFRTGVRTSAVEPMASSSNLARVLSMGEADYADALGGAPTAPQQPSLIIGHNSTFKILWDWLVLLMVVYTSVTVPFQAAFDRSVSESMSIFSDAVFWMDIVVNFRTTIVIDGKVVSDWRVIGRVYLRGWFFVDFISSVPFESILSSAQGNGELFQLLKSLRLLRLGKVVRKLDRLGSSGAFQIFYLMLGFALLDHWLACGWYAVGANVNDARTWLKLLPSGDKTSDYVNSIYFTTYTMTTVGYGNIAPSTEQEKIYSVVIMFIGAVAYASIFGNMASIIQRAYLSSSKYQATILSMKEFIRFHRIPATLQRRILSYAQHSWEMTHGIDMNAMLDSFPEALRADVSMHLHQPLVANSPLFKNASKGCMRSIALKLRTTFSAPGDCLIHQGDAIDTLFFIARGSMEIVVNERRVAVLSDGDFFGEMSLGEKSLGKANATVRALTFCDLHNIMHIDLLDIMHRYPEFMPEFKKNLHYSYSLRAKRSQNKEKELAAAADAVSAAVRASVVSGARAAREDDGGGSVHQVDVELGPLGETSRAASAVKLRKDTSWNGSTVDFFHRNGDEDIEIDGDSSDGDTDYNSAGLSRGGQSASQTLRPAANADESGAGGIYADAEGDVAAPMPVGNSILRRPPLPPHMRRISMGSAPNLGAAVHAEQEMPTINLGSGNFELRPPFVGLNAPSSPQIGSGRGTSSRGLFIRKPIVQHNLESGILSRMDAHEKKMQKYLEDNDERVQRMEAAMSKLSNDVNTLIGLLRRRGDDGNASMGRPSMATSRTGVSTIGGGVSEMSEDRT* # ORIGINAL: g10822.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 143 250 . - . ID=g10822;Name=g10822.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 143 250 . - . ID=g10822.t1;Parent=g10822;Name=g10822.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 143 250 . - . ID=g10822.t1.exon1;Parent=g10822.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 143 250 . - 0 ID=cds.g10822.t1;Parent=g10822.t1 #PROT g10822.t1 g10822 MPGATGSVYGDRGSGTMADSGDAAVKEEAMLRALEM # ORIGINAL: g10824.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 4051 8632 . - . ID=g10824;Name=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 4051 8632 . - . ID=g10824.t1;Parent=g10824;Name=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 8116 8632 . - . ID=g10824.t1.exon1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 8116 8632 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 6489 8003 . - . ID=g10824.t1.exon2;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 6489 8003 . - 2 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 6191 6324 . - . ID=g10824.t1.exon3;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 6191 6324 . - 2 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 5952 6071 . - . ID=g10824.t1.exon4;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 5952 6071 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 5644 5784 . - . ID=g10824.t1.exon5;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 5644 5784 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 5370 5501 . - . ID=g10824.t1.exon6;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 5370 5501 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 5097 5219 . - . ID=g10824.t1.exon7;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 5097 5219 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 4610 4756 . - . ID=g10824.t1.exon8;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 4610 4756 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 4448 4519 . - . ID=g10824.t1.exon9;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 4448 4519 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 4051 4293 . - . ID=g10824.t1.exon10;Parent=g10824.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 4051 4293 . - 0 ID=cds.g10824.t1;Parent=g10824.t1 #PROT g10824.t1 g10824 MKSRVGGVCRPFGHMRMALLVAALLMACDAAVTKVDTGPHKGGSEEEPLDFRKFKNHPVQVEGIDAAMDDTHPGAPNPDSSADTHVHTHPQHQYRHVVTHGHLHDVKCAQPHKLRAGAPPTRHLAAVSTRPIQLLRPNRAHTELEVVEEGIRALNVLDGPVAVVAAVGPYHSGKSFLLNELAGRPDVFRVGPSVDPSTAGVWAYAAPDKARLGDGRLVTLLYLDTEGFSSNNASADYDSKVFAVAALLSSHLIYNTVKTIDHGEIERLELLTRSAQLFGVRSQLSHIDSFDETLFDFPPLTWVVEDFAQATHPNENPTQWLRRLLGSGPRDADHQSGLMGLFPEVHCQTMFLPATDKALLRDLSTAEETDLTPEFTADRERLRDHVIEHIRLKERRVIPVARDAADEAQHAGARGRRESNALTGAEVGSLVRLLVAAANEGAMGHMPSVWALFLEGQLFHVREDCLRLYVEEMNVVLLEHPSTRHDADDSTLSARDRPGALGAHRGQTPSMRTAGRESLARARRAIRGVGSRIVGAVSRASSAVTEAAHRLARTGVSNPTHPPSDHSEPKRRVTVSTTGLPAELQRIFSEDELIPPVNERRLEDAHRAAVANATRLLRRLTIGLPTSDERASQYSLERAITEAWANIRTANVARIEALSASEEKLLLEDIESDFEEIEYPLNPEELDSECRELRSGALSHFSEVLADVKDSRVYTQHWRALEGGIGALCDRYAVRNARVTEQRLTDALAAAKDVYASHMTARIGRVPRTPGELDAIHLDAYAAANAAFHREASGVYDGKLYQAFNAQFRDATNSIRRKHDEDNTALIERRCELDYEHLSLRFTTYASSLYLPMEEDQLGERLATASDVSIADFKTRLAEFNQTRMYAVAYDKLKSTIAAECDRVKAHNVKAFANEVRQPLESAREIIHEIADNYWTTFTFRKMGRDVCWKHLSSKRVVNWPAERKWKVIDDFINNDLAPEMARVRSAQWRTLLMSVVFVLAGTALLVQLFAGSPIKEASRWLHSGRELATRRLMRSARSGDLAHPGQ* # ORIGINAL: g10827.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 18203 19728 . + . ID=g10827;Name=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 18203 19728 . + . ID=g10827.t1;Parent=g10827;Name=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 18203 18456 . + . ID=g10827.t1.exon1;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 18203 18456 . + 0 ID=cds.g10827.t1;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 18528 18666 . + . ID=g10827.t1.exon2;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 18528 18666 . + 1 ID=cds.g10827.t1;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 18767 19313 . + . ID=g10827.t1.exon3;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 18767 19313 . + 0 ID=cds.g10827.t1;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 19454 19728 . + . ID=g10827.t1.exon4;Parent=g10827.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 19454 19728 . + 2 ID=cds.g10827.t1;Parent=g10827.t1 #PROT g10827.t1 g10827 MLGNLWRSLFGGAGSNTEATAGRTLVLPASRDDATSATQASPSAMDPGTGSIFFVGNATVIIRYCGFTIMTDPNFLHKGDHAHLGFGLYTTRETDPVVELEDVGHVDLVLLSHMHDDHFDRTVEERLNKVRLANFAIKSTDPQAIPIVTTHHAARTLSSRGFVSTHALVTWETIAITREGSPYVLKITAMPARHAPGMLHHLSLLPQTMGSMLQFGMLPEGTERRAPSDGGHESPVPPAMAATLDPVLVLRNARVPTPGGGRYPDLPDPTAGNALLALPIFSLYISGDTLVHDDLAEIPRRFPDVDVALLHLGGTRILGLVVTMDAAQGVECVRIINATKSIPIHFKDYTAFKSRLDDFRAAVHTANLDDRVHFIEYGDTYHFEVPAVRLQAAAGSRSLDHLAD* # ORIGINAL: g10828.t1 original gene structure, not modified by PASA NODE_449_length_23508_cov_42.8676 AUGUSTUS gene 20200 20640 . + . ID=g10828;Name=g10828.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS mRNA 20200 20640 . + . ID=g10828.t1;Parent=g10828;Name=g10828.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS exon 20200 20640 . + . ID=g10828.t1.exon1;Parent=g10828.t1 NODE_449_length_23508_cov_42.8676 AUGUSTUS CDS 20200 20640 . + 0 ID=cds.g10828.t1;Parent=g10828.t1 #PROT g10828.t1 g10828 MFLCPRFRIAHSVLTRPTVARFSSTKSPTTATPPTLRGDGDRRASDRYPPDSVRFAADGLDDGTRLSTVESIAARLRENEDKLQGERWHSTSRTAAGGTAGAGDTQVPGESAQDMRGASSHDDAHTGGGLGERVYERARGHDIAPF* # PASA_UPDATE: g2179.t1, single gene model update, valid-1, status:[pasa:asmbl_6086,status:12], valid-1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . gene 138 3356 . + . ID=g2179;Name=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . mRNA 138 3356 . + . ID=g2179.t1;Parent=g2179;Name=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 138 290 . + . ID=g2179.t1.exon1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 138 290 . + 0 ID=cds.g2179.t1;Parent=g2179.t1;5_prime_partial=true NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 493 638 . + . ID=g2179.t1.exon2;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 493 638 . + 0 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 869 1034 . + . ID=g2179.t1.exon3;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 869 1034 . + 1 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 1371 1438 . + . ID=g2179.t1.exon4;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 1371 1438 . + 0 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 1766 1790 . + . ID=g2179.t1.exon5;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 1766 1790 . + 1 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 1971 2141 . + . ID=g2179.t1.exon6;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 1971 2141 . + 0 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 2437 2544 . + . ID=g2179.t1.exon7;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 2437 2544 . + 0 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 2715 2794 . + . ID=g2179.t1.exon8;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 2715 2794 . + 0 ID=cds.g2179.t1;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . exon 3110 3356 . + . ID=g2179.t1.exon9;Parent=g2179.t1 NODE_3458_length_3422_cov_35.3439_potentialcontaminant . CDS 3110 3356 . + 1 ID=cds.g2179.t1;Parent=g2179.t1 #PROT g2179.t1 g2179 CHLGEIALLQTEVGLALANLSSWMKPEKLPTPLLQVKGVSQCLMEPQPLGTVLVIGAWNYPCLLLLQPAIGAIAAGNAVVMKPSEVSANTSKLIAELVPKYLDREAIVVIEGAVDETTALLKEKFDHIFYTGNGAVGKIVLRAAAEHLTPVTLELGGKSPCIVDAGTDIEIAARRIINGKFFNAGQTCVAPDYLLVHEKIYGEFVEKLKGYIVQFFGEDPQKSSDLARIVNARHHRRIADLLKNGGANAKIVAGGKLDEADLYIAPTLVTDVDPASKLMQEEIFGPVLPILKITTIDEAISFVNARAKPLALYVFPGSSATKNAVQNRTTSGGFVVNDVIVHVACGELPFGGVGESGGTSSETVFVPVPVPVPARVYVCWGEEGELL* # PASA_UPDATE: g1243.t1, single gene model update, valid-1, status:[pasa:asmbl_9341,status:3], valid-1 NODE_77_length_43930_cov_45.272 . gene 2665 6088 . - . ID=g1243;Name=g1243.t1 NODE_77_length_43930_cov_45.272 . mRNA 2665 6088 . - . ID=g1243.t1;Parent=g1243;Name=g1243.t1 NODE_77_length_43930_cov_45.272 . five_prime_UTR 5769 6088 . - . ID=g1243.t1.utr5p1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 5497 6088 . - . ID=g1243.t1.exon1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 5497 5768 . - 0 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 5003 5210 . - . ID=g1243.t1.exon2;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 5003 5210 . - 1 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 4745 4882 . - . ID=g1243.t1.exon3;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 4745 4882 . - 0 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 3939 4438 . - . ID=g1243.t1.exon4;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 3939 4438 . - 0 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 3638 3683 . - . ID=g1243.t1.exon5;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 3638 3683 . - 1 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . exon 2665 3465 . - . ID=g1243.t1.exon6;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . CDS 3361 3465 . - 0 ID=cds.g1243.t1;Parent=g1243.t1 NODE_77_length_43930_cov_45.272 . three_prime_UTR 2665 3360 . - . ID=g1243.t1.utr3p1;Parent=g1243.t1 #PROT g1243.t1 g1243 MDSQSDSLPPAPLRDSPHGSMSSLHEEPLRRPGSGGYGRDSALLGAIGGGVPSAAPLPTIGQTKSPRVRPMLTKFSLTPETREPTNGALHINNEGDLVLGQHIGGEAVTIPSAALCLPVGNRLVTCAPSDLQELGEIGRGAYGAVFKMQHPGSGFVLAVKQIPVDVTEESRKQQLIRELGVLRESTGNPESMCPYIVKYYGAYFKEGDISICMEYMDGCSLDGIYKKTGPVPEPILGKIAVAMVHGLHYLKERHHIIHRDVKPSNVLINSLGEVKLCDFGISGRLENSVAKTYVGTNHYMSPERIQGTKLYDIRADVWSLGISLVELAMGQFPFPMADGRNVFAMLERIVKGPSPTVPADKFSPECVDFLARCLEKQPESRYNYVQLLEHPFIKIYERLPVDVASWAQRVIHACQSDDMDCS* # ORIGINAL: g1248.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 AUGUSTUS gene 27026 29206 . - . ID=g1248;Name=g1248.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS mRNA 27026 29206 . - . ID=g1248.t1;Parent=g1248;Name=g1248.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 27026 29206 . - . ID=g1248.t1.exon1;Parent=g1248.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 27026 29206 . - 0 ID=cds.g1248.t1;Parent=g1248.t1 #PROT g1248.t1 g1248 MDALTTESRNPASANLDQLSAVDIVRLMNSEDAKIAPCVLHASTQIAAAIEFIADRLRRGGRLIYLGAGTSGRLGVLDATECPPTFSTPPHMVVGIMAGGIRAVTESVEGAEDEPALGASDLDALNICSKDAVVGIAASGRTPYVLGALHRARTVGASAISVACNADSEISRAADIAIEVVCGPEVLSGSTRLRAGTATKMVLNMLSTGSMVLLGKTFGNLMVDLCASNGKLKVRANRIVRTVCGVDETESNAILAACDWHLKTAIVATLMHISPTDARKALDAADGRLADVLSSECVRLFVEPPVACSDPCASSQSAESSATSSHKTHESAFAAMKKCSSDELIIGVDGGGSHTVAVLARIRRDDRSACDVLGRGTSGPSNVHTVGEESAFAAIRTAIDTAFVSASMQRTSVACVCLGLAGAGRREDRVRISVWAKKENIARKVVVATDADILLVDHVTEESQKVPASAYTVAVIAGTGSICVGRRSDVSGSVDGEVGGARGAIESEGEGQRLYPHTVSAGGWGPLLGDEGSGYALALSALSAVARARDGRGEQTTLTRRLLTKMGCGEEVTAERLVSLLHSDASEWRHRAQLATLATEVLLAAEEGDAVARALVEAGALQLGEMAGSVVRRLRATGDCNNGAREDQIPSSPEQSGGCNVVCITVVFAGSLLARSSYYQSLVTESVARVIAHSCAGLDARMSRVEVVEDAALKACTVAVRGALAT* # PASA_UPDATE: g1251.t1, single gene model update, valid-1, status:[pasa:asmbl_9336,status:12], valid-1 NODE_77_length_43930_cov_45.272 . gene 37607 39150 . - . ID=g1251;Name=g1251.t1 NODE_77_length_43930_cov_45.272 . mRNA 37607 39150 . - . ID=g1251.t1;Parent=g1251;Name=g1251.t1 NODE_77_length_43930_cov_45.272 . five_prime_UTR 38978 39150 . - . ID=g1251.t1.utr5p1;Parent=g1251.t1 NODE_77_length_43930_cov_45.272 . exon 37607 39150 . - . ID=g1251.t1.exon1;Parent=g1251.t1 NODE_77_length_43930_cov_45.272 . CDS 37868 38977 . - 0 ID=cds.g1251.t1;Parent=g1251.t1 NODE_77_length_43930_cov_45.272 . three_prime_UTR 37607 37867 . - . ID=g1251.t1.utr3p1;Parent=g1251.t1 #PROT g1251.t1 g1251 MATSQQRNQVRNSLMGKESENIAGAKRKATLMDQNRLAGTDLRDKLDNASVWANYRDAERRSHEKELTVFQERLRKCKKESSDKVQAVKTVVKAEIALQRRDSAIAIESLKKAQESAMEKADSQTSLQQRRSDIFARLDATKKRQEKPAVAVSEARTVQIDDGLGSSDTDDDCDVAKRTIRPISSSSRFEHPTASRRSGRRQRHSSSSLSREASPSTGDYRRSGSVHTSTDSGFHDLRASSTYSSSTTGSRQQLASSELSLSHDSASAVSFANLNEGHRMRDFGGSEPEMHSRTRSSNSFASSGGQLGSSISGSFSRSDKSSLVSMAEERSTHSSHSDLTRLPAVRGLIRRPDPIRRRSTKHLLGSVTP* # ORIGINAL: g1252.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 AUGUSTUS gene 40749 41711 . - . ID=g1252;Name=g1252.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS mRNA 40749 41711 . - . ID=g1252.t1;Parent=g1252;Name=g1252.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 40749 41711 . - . ID=g1252.t1.exon1;Parent=g1252.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 40749 41711 . - 0 ID=cds.g1252.t1;Parent=g1252.t1 #PROT g1252.t1 g1252 MSSRRDDRIRELTSSNTPTLSRGSKDCFTDKNRLDTRRLQSELRLENARRESITSLYKNEEKELIRLKERLDKCKAQSTSYHDLPSSPMPVRRATARKSSLGVNSLLSGSVLSIPHLNPGGSLSCEDLSRPSSSMLSPRQLSPKSSSLTNSDTDVRPLILNATEPSAPADADTGDRLIARRGRMSLPTISPSGRPASPKANSMSPVAASQGDVSTTSLYVIPNGSTNRDGNSGPTSPVLSPTRRQRPSSPCPKASLISVMSTDSGICIDSPRPFPGRRGSRASLCSVSITTPSVGSVAEMEAEFDLEFELANDDYRRGSV* # PASA_UPDATE: g1244.t2, single gene model update, valid-1, status:[pasa:asmbl_9342,status:3], valid-1 # ORIGINAL: g1244.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 . gene 7446 17053 . + . ID=g1244;Name=g1244.t2 NODE_77_length_43930_cov_45.272 . mRNA 7446 17053 . + . ID=g1244.t2;Parent=g1244;Name=g1244.t2 NODE_77_length_43930_cov_45.272 . five_prime_UTR 7446 7565 . + . ID=g1244.t2.utr5p1;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 7446 7637 . + . ID=g1244.t2.exon1;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 7566 7637 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 8207 8321 . + . ID=g1244.t2.exon2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 8207 8321 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 8543 8665 . + . ID=g1244.t2.exon3;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 8543 8665 . + 2 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 9079 9212 . + . ID=g1244.t2.exon4;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 9079 9212 . + 2 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 9542 9877 . + . ID=g1244.t2.exon5;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 9542 9877 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 10192 10322 . + . ID=g1244.t2.exon6;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 10192 10322 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 10793 11651 . + . ID=g1244.t2.exon7;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 10793 11651 . + 1 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 11936 12100 . + . ID=g1244.t2.exon8;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 11936 12100 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 12257 12609 . + . ID=g1244.t2.exon9;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 12257 12609 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 12875 13571 . + . ID=g1244.t2.exon10;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 12875 13571 . + 1 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 13708 13866 . + . ID=g1244.t2.exon11;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 13708 13866 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 14231 14291 . + . ID=g1244.t2.exon12;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 14231 14291 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 14668 14822 . + . ID=g1244.t2.exon13;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 14668 14822 . + 2 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 14998 15631 . + . ID=g1244.t2.exon14;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 14998 15631 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 15819 15840 . + . ID=g1244.t2.exon15;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 15819 15840 . + 2 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 16069 16197 . + . ID=g1244.t2.exon16;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 16069 16197 . + 1 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 16588 16642 . + . ID=g1244.t2.exon17;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 16588 16642 . + 1 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 16861 17053 . + . ID=g1244.t2.exon18;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . CDS 16861 16944 . + 0 ID=cds.g1244.t2;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . three_prime_UTR 16945 17053 . + . ID=g1244.t2.utr3p1;Parent=g1244.t2 NODE_77_length_43930_cov_45.272 . mRNA 7566 16944 . + . ID=g1244.t1;Parent=g1244;Name=g1244.t2 NODE_77_length_43930_cov_45.272 . exon 7566 7637 . + . ID=g1244.t1.exon1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 7566 7637 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 8207 8321 . + . ID=g1244.t1.exon2;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 8207 8321 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 8543 8665 . + . ID=g1244.t1.exon3;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 8543 8665 . + 2 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 9079 9212 . + . ID=g1244.t1.exon4;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 9079 9212 . + 2 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 9542 9877 . + . ID=g1244.t1.exon5;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 9542 9877 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 10192 10322 . + . ID=g1244.t1.exon6;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 10192 10322 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 10793 11651 . + . ID=g1244.t1.exon7;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 10793 11651 . + 1 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 11936 12100 . + . ID=g1244.t1.exon8;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 11936 12100 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 12257 12609 . + . ID=g1244.t1.exon9;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 12257 12609 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 12875 13571 . + . ID=g1244.t1.exon10;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 12875 13571 . + 1 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 13699 13866 . + . ID=g1244.t1.exon11;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 13699 13866 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 14231 14291 . + . ID=g1244.t1.exon12;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 14231 14291 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 14668 14822 . + . ID=g1244.t1.exon13;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 14668 14822 . + 2 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 14998 15631 . + . ID=g1244.t1.exon14;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 14998 15631 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 15819 15840 . + . ID=g1244.t1.exon15;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 15819 15840 . + 2 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 16069 16197 . + . ID=g1244.t1.exon16;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 16069 16197 . + 1 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 16588 16642 . + . ID=g1244.t1.exon17;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 16588 16642 . + 1 ID=cds.g1244.t1;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . exon 16861 16944 . + . ID=g1244.t1.exon18;Parent=g1244.t1 NODE_77_length_43930_cov_45.272 . CDS 16861 16944 . + 0 ID=cds.g1244.t1;Parent=g1244.t1 #PROT g1244.t2 g1244 MVRVVQIETGDVWEIDVSPMDNVAVLRGEVQRVTGVNVDQQFLCYSEYELSDARPISFYGGAGTDDHPIYLHCRKAPDECVPAPTLQSLVIEEARRPITRQPEGQTLMTLEDRQNRFRLHCLFAEECNRRALGFVGCMQQLLTELAFQLEGYHVARRCLQARQAMLLGEIATFEDKWGKIIALGDESLVLFEPCMQVMKRVSLHRTLLPETGVGGGADMQTVVANANGMLAAVVPEARLRQWIVTDCQPTRASVVPHVVELIGHFKNTASRVRDALRMEPQSPLFLAAQKTVQEFISAATEMARQQSTIAQSFAQNLNTSLLRTDISGLDALLDSHTTVMTMSERIDAELCSLTVRAAEVRMQVCVEVRRRMADVSAHRKSISQSRQRIGDHSHHDIYDLFLNKFSHLEVCCSIPVAYAALLAEGLRRRRFGEWTVRTAQVLSDILSRVRAQEQERREAFVKKHLACILRTHGSAYRYPENVLASYKNTDAHVPSVGVNPSDLAKGPDVNEEDIASLRGMLEVIIRGGNGAADGSVDAGAADVAKKALATVDSLLQPILGFAQMAPAYFGYADKTPPRIAGMDSSVSEDTHASCSQRIRSLEKELFRLTSANVPAYVSTHSASASSGAESFSLVESCRSDRTFNPSGHLSGGGGSQLGAFPRGRSQSDLTPSYHRTDEEVKRLRGQVEQLQQDLSKTESARHLAESGRMEGRGDQSSAAASLSRGGMGDMMSDGLPTLPPIPIERVESSVQTEPMVIGEPIATSQQVALPNQPSAEMDSQEFELHIVGIASLLSTVCDRSSVEQRMIRLRNAFVASNARLADACADAAQKTLELSDAHGRIASLNLSLNTEKSAAASARANEAIAEKQYKELDAELRESKAARVLLEEKIAAMERESASRAKAEEASRAQAEAVQCELNALRASIRERDAKVVSALSGLVTSPLAGVTATLATSASAKFQQATAVESESRIGILSRCVGSIADAYAGVVLSGQDEPASIQASDVHNALAALLKKEKDASDAAQMELLEMRRAAHVTGPETDKRYREAQLNNAHLERQLQQHTASVIMAGEVCGAASRELFRQYSVLVDIQLALVESKIYPFREPSPPPIIDEVPLTPLLDTAASTQAGQLLAYNRTMARALSETAAGITCPPAGPSNLPTPSGAITAPASHTGTSVPYLDRVPPAGGSVATGILSFPLPMSSSTNLRAPNVSATSTLTCAQGMQGGLLGQQTASASGGSMATGSLIGRGVASSSLETHSSNSVERSPSLSLPYPPSSAALSSAVAAVQQLGAYLDKLNSDWQDEVVHNVEMVLRAHAGIAAQLKGLLEKPTVPKLSFESFSIEDIVLFFPKEASTHWVAFATMGSPYFLSEDIVYVMRQDGRMRRWMLGEIVALEEFVASIHSNPFDLPDGTRYFVVDVSIYASDAG* #PROT g1244.t1 g1244 MVRVVQIETGDVWEIDVSPMDNVAVLRGEVQRVTGVNVDQQFLCYSEYELSDARPISFYGGAGTDDHPIYLHCRKAPDECVPAPTLQSLVIEEARRPITRQPEGQTLMTLEDRQNRFRLHCLFAEECNRRALGFVGCMQQLLTELAFQLEGYHVARRCLQARQAMLLGEIATFEDKWGKIIALGDESLVLFEPCMQVMKRVSLHRTLLPETGVGGGADMQTVVANANGMLAAVVPEARLRQWIVTDCQPTRASVVPHVVELIGHFKNTASRVRDALRMEPQSPLFLAAQKTVQEFISAATEMARQQSTIAQSFAQNLNTSLLRTDISGLDALLDSHTTVMTMSERIDAELCSLTVRAAEVRMQVCVEVRRRMADVSAHRKSISQSRQRIGDHSHHDIYDLFLNKFSHLEVCCSIPVAYAALLAEGLRRRRFGEWTVRTAQVLSDILSRVRAQEQERREAFVKKHLACILRTHGSAYRYPENVLASYKNTDAHVPSVGVNPSDLAKGPDVNEEDIASLRGMLEVIIRGGNGAADGSVDAGAADVAKKALATVDSLLQPILGFAQMAPAYFGYADKTPPRIAGMDSSVSEDTHASCSQRIRSLEKELFRLTSANVPAYVSTHSASASSGAESFSLVESCRSDRTFNPSGHLSGGGGSQLGAFPRGRSQSDLTPSYHRTDEEVKRLRGQVEQLQQDLSKTESARHLAESGRMEGRGDQSSAAASLSRGGMGDMMSDGLPTLPPIPIERVESSVQTEPMVIGEPIATSQQVALPNQPSAEMDSQEFELHIVGIASLLSTVCDRSSVEQRMIRLRNAFVASNARLADACADAAQKTLELSDAHGRIASLNLSLNTEKSAAASARANEAIAEKQYKELDAELRESKAARVLLEEKIAAMERESASRAKAEEASRAQAEAVQCELNALRASIRERDAKVVSALSGLVTSPLAGVTATLATSASAKFQQATAVESESRIGILSRCVGSIADAYAGVVLSGQDEGRQPASIQASDVHNALAALLKKEKDASDAAQMELLEMRRAAHVTGPETDKRYREAQLNNAHLERQLQQHTASVIMAGEVCGAASRELFRQYSVLVDIQLALVESKIYPFREPSPPPIIDEVPLTPLLDTAASTQAGQLLAYNRTMARALSETAAGITCPPAGPSNLPTPSGAITAPASHTGTSVPYLDRVPPAGGSVATGILSFPLPMSSSTNLRAPNVSATSTLTCAQGMQGGLLGQQTASASGGSMATGSLIGRGVASSSLETHSSNSVERSPSLSLPYPPSSAALSSAVAAVQQLGAYLDKLNSDWQDEVVHNVEMVLRAHAGIAAQLKGLLEKPTVPKLSFESFSIEDIVLFFPKEASTHWVAFATMGSPYFLSEDIVYVMRQDGRMRRWMLGEIVALEEFVASIHSNPFDLPDGTRYFVVDVSIYASDAG* # ORIGINAL: g1245.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 AUGUSTUS gene 17561 19191 . - . ID=g1245;Name=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS mRNA 17561 19191 . - . ID=g1245.t1;Parent=g1245;Name=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 19090 19191 . - . ID=g1245.t1.exon1;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 19090 19191 . - 0 ID=cds.g1245.t1;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 18662 18822 . - . ID=g1245.t1.exon2;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 18662 18822 . - 0 ID=cds.g1245.t1;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 18376 18490 . - . ID=g1245.t1.exon3;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 18376 18490 . - 1 ID=cds.g1245.t1;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 17561 18160 . - . ID=g1245.t1.exon4;Parent=g1245.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 17561 18160 . - 0 ID=cds.g1245.t1;Parent=g1245.t1 #PROT g1245.t1 g1245 MARNSEKQLTGLNRFLLEQQRIDKEEKAPSRPPLHTLKTADEVRRWIPQIKNEIGYVVQQLSGVRNYRDHKLREFEDRLEDLEHLYARFVRRVLQLDPSSDAIPWVPRSYVRRTQRVASATTTTSTGIDSINDDGVNDEAQRNSTKRDAHSLLDNTASGVDAPPAKIRRIVLPLLDAEENDALAVNQAEVENTMQHPHPRTNKDNVPSPLMAARAIDADRMDKPLEFRSSVALFSPYSALQTARGHVGDAKVVRMSGTDGCSGSGSQLPASHVILPASAGVAVGVGTVSAIGAIGAPSGCVTAKSVPFVAAVGLVDYGSDDDGDS* # PASA_UPDATE: g1247.t1, single gene model update, valid-1, status:[pasa:asmbl_9334,status:12],[pasa:asmbl_9343,status:12], valid-1 NODE_77_length_43930_cov_45.272 . gene 21507 26565 . + . ID=g1247;Name=g1247.t1 NODE_77_length_43930_cov_45.272 . mRNA 21507 26565 . + . ID=g1247.t1;Parent=g1247;Name=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 21507 21638 . + . ID=g1247.t1.exon1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 21507 21638 . + 0 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 21839 21957 . + . ID=g1247.t1.exon2;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 21839 21957 . + 0 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 22120 23902 . + . ID=g1247.t1.exon3;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 22120 23902 . + 1 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 24062 24168 . + . ID=g1247.t1.exon4;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 24062 24168 . + 0 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 24337 24649 . + . ID=g1247.t1.exon5;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 24337 24649 . + 1 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 24944 25041 . + . ID=g1247.t1.exon6;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 24944 25041 . + 0 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 25517 25648 . + . ID=g1247.t1.exon7;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 25517 25648 . + 1 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . exon 25890 26565 . + . ID=g1247.t1.exon8;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . CDS 25890 26037 . + 1 ID=cds.g1247.t1;Parent=g1247.t1 NODE_77_length_43930_cov_45.272 . three_prime_UTR 26038 26565 . + . ID=g1247.t1.utr3p1;Parent=g1247.t1 #PROT g1247.t1 g1247 MASSTSSSSSRPARILPVDWYSKHLPQSELRLVCAELRAVEGKRADAPESLRHIRMAVETAIRSVETHCSEIVRLLANKTFDPSTAPAIVPERPATVCTSVRCEVSPDTGRHLVAANDIEAGLVILKESPLAAIINSDFRRSRCDFCFESVVEPRRASVMLPPATPNGTRAKNVEKRTVREPLRCNNCDDVYYCSKDCMKADAFDHAFECKSELHRRAPPNVRLALRILRRIRFKGWAGPNGVAGNNPDENSEAGEDGQRKGQKTSTVAELLEQKQIQEQAQEERARLERKQARKKPTIPHIPCDPLSPGSEDDGRLVSGTSLAASLEAHGVGYAERIATHVMDACLAHACVGAYEMGCHDCDVGTEKDKEKGSSAGSNAMQSAQNGSDAAKHMLRPHGSGDEAPRRESMITSVVLGHSGKDVKPAPKEAREGSAGGLRATRSSTHVPTLDISGSTDSLSRIPISPRVLKAAAQHPILLAPLLKGSGQGSSTPNLHAGGPHVKPKSLLQSVMSHTGSVSGSAVSLRIHSDDNTKGNALSAASSTGCLPSHTNPVVERPVCVQCVDATVQLVLWLARQETNVNAVTALISGSEAEKVSAVQQALQPGQSLLSRVRSQTPNANSASPLTATLEPTSKEDLVQAKVALAVYPLGAMANHSCKPVAVLGFNKRMLCLRASEAIKTGGEIAISYGPHAARIPTVERLDILWKQYRFVCRCDACAGGEDVGGNYLCQEPNCGGRMTVSMAASAYAQGPPGLGHQPSGLSGLHGHTKKHAIDPSTPFECRSCGASARLADYAHMDREADTLSNEGRAMLDLGSPKDALQRFLRALALRQRANHATCLDRAELENNIARCYSGMGNHAQAAKHIQTSCIAICAQYGASSPEHANEVLLLAQLRLASGDKAGAIVAAREAATIYRACYGKKHHALEDLQKIASYVGEPLFSE* # PASA_UPDATE: g1246.t1, single gene model update, valid-1, status:[pasa:asmbl_9333,status:12], valid-1 NODE_77_length_43930_cov_45.272 . gene 19667 20734 . - . ID=g1246;Name=g1246.t1 NODE_77_length_43930_cov_45.272 . mRNA 19667 20734 . - . ID=g1246.t1;Parent=g1246;Name=g1246.t1 NODE_77_length_43930_cov_45.272 . exon 19667 20734 . - . ID=g1246.t1.exon1;Parent=g1246.t1 NODE_77_length_43930_cov_45.272 . CDS 19667 20734 . - 0 ID=cds.g1246.t1;Parent=g1246.t1 #PROT g1246.t1 g1246 MMRAQLLTAHGGVDKYDYRDDVPVPSVPVGSVRVRVHACGMNNTDVWTRQGAYGQDGESGWQPLSFPRIQGADIVGVIDHIASPSDETPIVDGRGIRLCIGQRVILYPCLYGKRGITDCRYLGSEVDGGFAEFCVVPAENAFVIDPSCTVSDAVLAAVPTAYMTAFHMVERAHVSAGSTVVVTGAAGGVGVACVQMCKAKGAWVIGVASASKEDQLRSVGIDAFVARPADGSSIAKPLIDAAGGRDIDVALDAVGGTMVMDLFNALRPSGVYACCGAVSGTWVNVHWPTFYLKHLDVLGCMLATREEFGVLIDLVCSGSLTPHVARVFPLRELPLAQEEFLKRAFFGKFVVDCTH* # ORIGINAL: g1249.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 AUGUSTUS gene 30509 30802 . - . ID=g1249;Name=g1249.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS mRNA 30509 30802 . - . ID=g1249.t1;Parent=g1249;Name=g1249.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 30509 30802 . - . ID=g1249.t1.exon1;Parent=g1249.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 30509 30802 . - 0 ID=cds.g1249.t1;Parent=g1249.t1 #PROT g1249.t1 g1249 MKISFATEMDHTECNCLDCGSVDEHIVCYEMDYTSATASTAVPSMKISFEFDGAHIELEMEGATERIVLTPLENSPQYTRTVAYDGPAWTGYSGTTP* # ORIGINAL: g1250.t1 original gene structure, not modified by PASA NODE_77_length_43930_cov_45.272 AUGUSTUS gene 34445 36508 . - . ID=g1250;Name=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS mRNA 34445 36508 . - . ID=g1250.t1;Parent=g1250;Name=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 36389 36508 . - . ID=g1250.t1.exon1;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 36389 36508 . - 0 ID=cds.g1250.t1;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 35832 36004 . - . ID=g1250.t1.exon2;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 35832 36004 . - 0 ID=cds.g1250.t1;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 35442 35596 . - . ID=g1250.t1.exon3;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 35442 35596 . - 1 ID=cds.g1250.t1;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS exon 34445 35133 . - . ID=g1250.t1.exon4;Parent=g1250.t1 NODE_77_length_43930_cov_45.272 AUGUSTUS CDS 34445 35133 . - 2 ID=cds.g1250.t1;Parent=g1250.t1 #PROT g1250.t1 g1250 MVVERTALVNQLTSENARDLTGRRKSSLLDQNRAQNVDLQRSLGQVDAAMSYQDSHRKSEEMSMRSFMDRLATQRASLDVRENSLSFTERTHKSTLTRLRGSGQAPSMLPAAPLNGGPAAPLERRLSQGVMTIPPQLTRRRSSQAGFDALVQSSLMNQACSDKADNGLPRLQSSASAMSFTLMDRQSVLNSIRDGTTPGSDAYEATRCASADTSPTLRRRIVPVDDDGKNAGTVSPTQSSALPKSVSAPSSPRGQRDASLPSYIRRLAPLESQSNLSGKIASRPALSSTEENAAGALSSLAGSGTIADAKVEGIFPSPPSSASGSRPSSGSLKRRQSRVTFKDEVEAARPQTPPSKVSSSAGTPETTPTTPDTTLVSA* # PASA_UPDATE: g1242.t1, single gene model update, valid-1, status:[pasa:asmbl_9340,status:12], valid-1 NODE_77_length_43930_cov_45.272 . gene 496 2197 . - . ID=g1242;Name=g1242.t1 NODE_77_length_43930_cov_45.272 . mRNA 496 2197 . - . ID=g1242.t1;Parent=g1242;Name=g1242.t1 NODE_77_length_43930_cov_45.272 . five_prime_UTR 1957 2197 . - . ID=g1242.t1.utr5p1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . exon 1899 2197 . - . ID=g1242.t1.exon1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . CDS 1899 1956 . - 0 ID=cds.g1242.t1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . exon 1412 1645 . - . ID=g1242.t1.exon2;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . CDS 1412 1645 . - 2 ID=cds.g1242.t1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . exon 1136 1262 . - . ID=g1242.t1.exon3;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . CDS 1136 1262 . - 2 ID=cds.g1242.t1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . exon 817 940 . - . ID=g1242.t1.exon4;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . CDS 817 940 . - 1 ID=cds.g1242.t1;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . exon 496 576 . - . ID=g1242.t1.exon5;Parent=g1242.t1 NODE_77_length_43930_cov_45.272 . CDS 496 576 . - 0 ID=cds.g1242.t1;Parent=g1242.t1;3_prime_partial=true #PROT g1242.t1 g1242 METLIRARDNNMKSILAHDPTPRDVGPQGASVIVRKDIFRPEETSPRRHGLQAFHAYDMVDKTLIVPSLDPRREEYKAGAGTGGRRFGHKNSTDTKDPGISASEPSEFYFGTHSTRTVEGTTYGYKGPDKLIDKLPVDLRTSITRKLEKQREVQQDLIRFKETDEHHKLQVHEQRQSEKQQELDLLRKYDPWGKPGAGAPVRPLDGRR # ORIGINAL: g2833.t1 original gene structure, not modified by PASA NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS gene 123 1048 . - . ID=g2833;Name=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS mRNA 123 1048 . - . ID=g2833.t1;Parent=g2833;Name=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS exon 811 1048 . - . ID=g2833.t1.exon1;Parent=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS CDS 811 1048 . - 0 ID=cds.g2833.t1;Parent=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS exon 668 697 . - . ID=g2833.t1.exon2;Parent=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS CDS 668 697 . - 2 ID=cds.g2833.t1;Parent=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS exon 123 203 . - . ID=g2833.t1.exon3;Parent=g2833.t1 NODE_4380_length_1703_cov_52.5805_potentialcontaminant AUGUSTUS CDS 123 203 . - 2 ID=cds.g2833.t1;Parent=g2833.t1 #PROT g2833.t1 g2833 MAEQVDPIYANFTKVQKEIDAVTARIAKTERKTKELKKLRKDRELTAFQKEELARREKKLEVLRDEKIELLKQKSFAIQAASNVGALAFDHRRKRPRARGDEAQAEGDQRDTSDEE # PASA_UPDATE: g10185.t1, single gene model update, valid-1, status:[pasa:asmbl_9364,status:12],[pasa:asmbl_9365,status:12], valid-1 NODE_785_length_17712_cov_50.3932 . gene 9418 13894 . - . ID=g10185;Name=g10185.t1 NODE_785_length_17712_cov_50.3932 . mRNA 9418 13894 . - . ID=g10185.t1;Parent=g10185;Name=g10185.t1 NODE_785_length_17712_cov_50.3932 . five_prime_UTR 13815 13894 . - . ID=g10185.t1.utr5p1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 13715 13894 . - . ID=g10185.t1.exon1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 13715 13814 . - 0 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 12363 13528 . - . ID=g10185.t1.exon2;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 12363 13528 . - 2 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 12073 12209 . - . ID=g10185.t1.exon3;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 12073 12209 . - 0 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 11617 11920 . - . ID=g10185.t1.exon4;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 11617 11920 . - 1 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 11239 11447 . - . ID=g10185.t1.exon5;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 11239 11447 . - 0 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . exon 9418 11040 . - . ID=g10185.t1.exon6;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . CDS 9498 11040 . - 1 ID=cds.g10185.t1;Parent=g10185.t1 NODE_785_length_17712_cov_50.3932 . three_prime_UTR 9418 9497 . - . ID=g10185.t1.utr3p1;Parent=g10185.t1 #PROT g10185.t1 g10185 MDAEHGASCSLDDKAFVAYCVALEKAALGSMPKATNKKGKNVGGKREDEVRHKRPPGVAGEVLRVGREDLARLLRTIACNHCRQFALRVYRSHFTQSTDASGGRKGSSAEGVANDDEDVMVAAAQAAADAASDVPDLVAALDAHFSTATAGARKASGSKVGSKGKEKEGDQEDAERLQKSHRSAQLHANADATCKAVASALALVRGLTDGSSSTESAVFQNVALSIANPLCAAALDAAASPTSATGGSVGLLRHVASASQAAVDFSASALSLEGLKAVCGASREWISTCMAPCPFSGRQTGLCLPADFDAAVRELNADAVNCRRDFAKDLATMHAARHRIMWQTCDTIARGTDRRVAVVGSLVDARHAFLVEWVEGDVPVGDRWTALMKAKGGKKREYTGSARSDRIAAEREKEAAADALFAGYCEKLEASSLAWADDMLSKFVPAVQEAVSAELIALRKCVKELDERFQRVDPVTVASDLLELCQSALKAANESIVEAENVLAAGVEDVRTMQETRHAGIVADIARVVLQWKSPPAEESGGAEGESVGSLTAKKALMDNKEFRRKLRKIENRIADARSDTVDALVTLATPPSVQPTHRSVLAATCVEVKLAAESQRAEFGAQLKTHTDELSVRRVALRDSYREEVDRGAVWLYRGLGHAVWQSLKRSYEESLVAQRQAELLKEQQQEETKRARQKESVAPKPKPVGESVEFIANNADEGGDPAADAKKKNKKKSKKENTNDEQPLPRVHATPAPAPAAAPAKVPPPAPAAAPAAKVPPPAPSAAPAATASPSPAPTTSASATELRARQNATRQDAPPTVPVATPHTPHTEVRTPPGMDGREIAPPPGIAYAADGHTAAGQPGMDTAPPPWTHHAYAALDTPSLLQIIDGLTAMNTDLARRLTVSEHTVARQASMIAELSARLQIAVQVARNPVVFAATDANTVPIPTSSQQHQHQQQQHQQYQQHQQHQQQRAEIPAKNQIADTATSGNAAFPVNGGSEHHTQPKLQRYVPPNERRRAKASQYDDQDGQTGATPRGNNKSRGSAGAPAGSANGRREPSGQDTPTPSDDVAERGARHQQGPHARTPTGQQQQQQQQQQQQQQHPNNPQTTDRQRRTFCANCGREGHASFECRNGCRVCNATDHISDMCPTRK* # PASA_UPDATE: g10186.t1, single gene model update, valid-1, status:[pasa:asmbl_9366,status:12], valid-1 NODE_785_length_17712_cov_50.3932 . gene 14571 17531 . - . ID=g10186;Name=g10186.t1 NODE_785_length_17712_cov_50.3932 . mRNA 14571 17531 . - . ID=g10186.t1;Parent=g10186;Name=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 17318 17531 . - . ID=g10186.t1.exon1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 17318 17531 . - 0 ID=cds.g10186.t1;Parent=g10186.t1;5_prime_partial=true NODE_785_length_17712_cov_50.3932 . exon 16905 17055 . - . ID=g10186.t1.exon2;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 16905 17055 . - 2 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 16331 16634 . - . ID=g10186.t1.exon3;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 16331 16634 . - 1 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 15902 16107 . - . ID=g10186.t1.exon4;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 15902 16107 . - 0 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 15427 15706 . - . ID=g10186.t1.exon5;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 15427 15706 . - 1 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 14993 15180 . - . ID=g10186.t1.exon6;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 14993 15180 . - 0 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . exon 14571 14733 . - . ID=g10186.t1.exon7;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . CDS 14604 14733 . - 1 ID=cds.g10186.t1;Parent=g10186.t1 NODE_785_length_17712_cov_50.3932 . three_prime_UTR 14571 14603 . - . ID=g10186.t1.utr3p1;Parent=g10186.t1 #PROT g10186.t1 g10186 AVLEKGGHFSGINRKVQLKPCRWTTRVAADGTEEEIVLEALLILKWGGELTHAGLEQSESLGKWFRVNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMTAAAFAKGLLDLEGELTPINVSLVRKDNAAIKLLDDSSAALPYLERVKETLKAILGSDKNIDEKTIEQAAPTHAQSLESSLRRIANPIETLARLQQLVEQLTDQLRIRLSADTGADVMLCNGETLSLMYRRWDKLLRDFHSKRKGSFEISKIPDIYDCAKYDCLHNADLNLTGMTDLYEVSKSLADYVIPQEYGVTREEKVSIGRGICGELLWKMLNDLSIASDGLADDGHIRSHFPMETVHRLDARYALDIKSPLRHVRTRLYFTSESHMHSLLNVLRYGVAESDANSDGLGRVSAATELDYLTQIVVRLYERPQLDPSDPARFRAEVLFSPGACQSPTLGTDDAGRLLPRGGHVIPVEPPSVMRGSVDLKTFMSSVVSLLDEECAASA* # ORIGINAL: g10183.t1 original gene structure, not modified by PASA NODE_785_length_17712_cov_50.3932 AUGUSTUS gene 1238 3827 . + . ID=g10183;Name=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS mRNA 1238 3827 . + . ID=g10183.t1;Parent=g10183;Name=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 1238 1413 . + . ID=g10183.t1.exon1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 1238 1413 . + 0 ID=cds.g10183.t1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 1623 1665 . + . ID=g10183.t1.exon2;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 1623 1665 . + 1 ID=cds.g10183.t1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 1917 2081 . + . ID=g10183.t1.exon3;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 1917 2081 . + 0 ID=cds.g10183.t1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 2482 2547 . + . ID=g10183.t1.exon4;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 2482 2547 . + 0 ID=cds.g10183.t1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 2887 3161 . + . ID=g10183.t1.exon5;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 2887 3161 . + 0 ID=cds.g10183.t1;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 3419 3827 . + . ID=g10183.t1.exon6;Parent=g10183.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 3419 3827 . + 1 ID=cds.g10183.t1;Parent=g10183.t1 #PROT g10183.t1 g10183 MARPLDYSKWNNIEISDDEDDTHPNIDKESLFRWRHQARVDRERQEKEEQEQLVVAKKETHNKVEEIQSKIAQFGENSPEVTSLKSKLTELEKQELHYAQKEADLRRQKELFPKWNVDNICKPGFDKVVLNKAAPEAKKPANEDEEAQDTANFMKTHEKEIKKYGMLQKFEDTHRYLLEHPDLANEGTANYLVLWAIELEIEGKHDLMRYVAHQTIVMQYILEVAKTAKRDPKTCVNGFFQRLKLADQTYMDAFNDEWEAFVGRVKARAKVRIEEATKQLEADERQQRLGPGGLDPLEVLEELPQDMRSAFEEKDMPKLHRALAALPIDEAKKWMTKCEDSGLWVPSKDTHDDDGDVKEEDEVDDEDADDAEDAAAK* # ORIGINAL: g10182.t1 original gene structure, not modified by PASA NODE_785_length_17712_cov_50.3932 AUGUSTUS gene 47 960 . + . ID=g10182;Name=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS mRNA 47 960 . + . ID=g10182.t1;Parent=g10182;Name=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 47 202 . + . ID=g10182.t1.exon1;Parent=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 47 202 . + 0 ID=cds.g10182.t1;Parent=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 290 694 . + . ID=g10182.t1.exon2;Parent=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 290 694 . + 0 ID=cds.g10182.t1;Parent=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 856 960 . + . ID=g10182.t1.exon3;Parent=g10182.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 856 960 . + 0 ID=cds.g10182.t1;Parent=g10182.t1 #PROT g10182.t1 g10182 MAEVPEDLLKRHDAYAELLDKPDFTNWQPYIETFGFKVFRKTRENSQLYEYLAHGVLPDVHPETCNRIFTDYDLRKSWDEYIFNHRYLIGTHGHGTMYCAVKYPWPLSSRDYVYMLHSHTIEKPSQDGTTKKVWSVIGRSKDHTDAPEHKSYVRVIDYEQVLAMRKHEKGTEILMHYFDDPRGNIPTMVINWAAQTGVPNFLKKFHQVCLDHQKKNGTPSA* # ORIGINAL: g10184.t1 original gene structure, not modified by PASA NODE_785_length_17712_cov_50.3932 AUGUSTUS gene 4602 8011 . - . ID=g10184;Name=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS mRNA 4602 8011 . - . ID=g10184.t1;Parent=g10184;Name=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 7904 8011 . - . ID=g10184.t1.exon1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 7904 8011 . - 0 ID=cds.g10184.t1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 7675 7739 . - . ID=g10184.t1.exon2;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 7675 7739 . - 0 ID=cds.g10184.t1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 7333 7505 . - . ID=g10184.t1.exon3;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 7333 7505 . - 1 ID=cds.g10184.t1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 6841 7020 . - . ID=g10184.t1.exon4;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 6841 7020 . - 2 ID=cds.g10184.t1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 4828 6606 . - . ID=g10184.t1.exon5;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 4828 6606 . - 2 ID=cds.g10184.t1;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS exon 4602 4651 . - . ID=g10184.t1.exon6;Parent=g10184.t1 NODE_785_length_17712_cov_50.3932 AUGUSTUS CDS 4602 4651 . - 2 ID=cds.g10184.t1;Parent=g10184.t1 #PROT g10184.t1 g10184 MQAPPRVSRGRSALAVMKTQLPVAHAVAELPPVCAKCAQKGTDSIDPGCADCWEIIADPETSVAQLFAVLRQWTPRAQAFIDDVAKQILCRGGHLDDRDGMTGMTLLHFAARAGADGYADPRRAARLAASLVLLGASADVHSEWTGMTPLHIAAHYGCDAVVATLLEGRTRASVDAVAHGLDEATPLHLACQAHHATIVEILIAHNANPTLRDAHGRTPLDSIALADDDDSVAVGAPGLTPLARIRQALEGAGMRFRDAAISHADSGGRAELAAMEDTGAVDAPNRGGREDGSRAAHAQDRRRETSVDVSRRRDVADDDRGQKRAIGGRSMSVRFDDSVLVRTRTLSDSTQDSDGRDGEGAGRKMQADAGAAAERKDTASTARDLRTASMARSQTVASDALAAPRAVANTHGMKDAAHWRSNSISDVGHLRHAGRYDGLRGHVSHEGDAVHGDGFATPPGHSEGRRTSLSDPLIAAMLSPRLRARLAEARSQQQQQQQSSAQSSKEQSEEKRGAPQVLPTNDRFGDGAPPNHAYSPTVEQKTLGAIGDNSHYAPLAHHTHSNPLPADHERNEAYRRKTSSAPSAPAITAVAETPPVHADIPTVVTVDLERVAVQTDDTLALGTGSDAGSPHISPRPSRRRDVRERREHSAETSVDASGGHVSSALRRASLAAGAAERVHAATTSSSIGDGGHLHVAGLAPNPPLSRGGSSNTLGGAPQSPRATREKEQLPDLREGQNVSVGGEVGVIKYIGLVDFAKGLWVGVVLRKPVGKNNGSVNGRQYFAW* # PASA_UPDATE: g13068.t1, single gene model update, valid-1, status:[pasa:asmbl_2641,status:12], valid-1 NODE_1795_length_9203_cov_42.8466 . gene 8243 9015 . + . ID=g13068;Name=g13068.t1 NODE_1795_length_9203_cov_42.8466 . mRNA 8243 9015 . + . ID=g13068.t1;Parent=g13068;Name=g13068.t1 NODE_1795_length_9203_cov_42.8466 . five_prime_UTR 8243 8297 . + . ID=g13068.t1.utr5p1;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . exon 8243 8406 . + . ID=g13068.t1.exon1;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . CDS 8298 8406 . + 0 ID=cds.g13068.t1;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . exon 8694 8735 . + . ID=g13068.t1.exon2;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . CDS 8694 8735 . + 2 ID=cds.g13068.t1;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . exon 8950 9015 . + . ID=g13068.t1.exon3;Parent=g13068.t1 NODE_1795_length_9203_cov_42.8466 . CDS 8950 9015 . + 2 ID=cds.g13068.t1;Parent=g13068.t1;3_prime_partial=true #PROT g13068.t1 g13068 MPLKIVTASGRTIAEMANATDKTTAAEIKAFIQSKNKKLYPDRQMLRLEPRGKALGDNEAVGKTTTLYFKDL # ORIGINAL: g13066.t1 original gene structure, not modified by PASA NODE_1795_length_9203_cov_42.8466 AUGUSTUS gene 580 5576 . - . ID=g13066;Name=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS mRNA 580 5576 . - . ID=g13066.t1;Parent=g13066;Name=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 4408 5576 . - . ID=g13066.t1.exon1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 4408 5576 . - 0 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 3793 3910 . - . ID=g13066.t1.exon2;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 3793 3910 . - 1 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 3464 3609 . - . ID=g13066.t1.exon3;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 3464 3609 . - 0 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 3088 3172 . - . ID=g13066.t1.exon4;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 3088 3172 . - 1 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 2667 2813 . - . ID=g13066.t1.exon5;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 2667 2813 . - 0 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 1784 2394 . - . ID=g13066.t1.exon6;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 1784 2394 . - 0 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 1524 1648 . - . ID=g13066.t1.exon7;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 1524 1648 . - 1 ID=cds.g13066.t1;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 580 1227 . - . ID=g13066.t1.exon8;Parent=g13066.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 580 1227 . - 2 ID=cds.g13066.t1;Parent=g13066.t1 #PROT g13066.t1 g13066 MGDDADWEDVNHPASNPTRSFFEFASGHGEFFERTDQANITQQQTIMESVTAPAQHRFQRFFFSSKTPATARPDGKGASTLASGSLKDAAQGVEDKRNATGRRLLSELIGRGIDMMSRDENGNTPLLWALREYAAAARNRDASSSPQIAQGSRFVSLSAAFGKGGVAASDARISNLKALAVALLGDDDPATAINNDGWGALHYVACMPSAEDASEFMGVLSAPNGAHLCHVRDQKGRTPLLLAIANGSAEIALAMTSKYGINPRLGQTSSRDPNSGADNNDNNDNNDGDGDCGMQQPSIHVDKSGQNLLHAIASHSWENCNYRVLKELIDAVGGDERTDRLAVDSFGRTPLFLAHRRIKTPVIMALFAGLYAASSAAHANGTPALFDAVRNDNHVSVKHLMGFKTGARYIRDSKNRSALFFARSLAMIKLLYDAGMRDLRILDTTTGRTALHAMVSAGGEFGEENVRDVVQFLFESDGGAFELKDNDGNVCLHVATTREFAAALLSVCLSLVHVANSAGRTPAHLFLLRGSFDCFVECKRAGANLLALDNEGKSAMAIASLETLCALLMNSSAEDTASYLEKCKLSDLVRPLNSGSGGDGRTLLHAVCAYDRRLLTPTPTVNKSFDFVNVDDAQGYASPIASTKSSLEGLSVEERRRMSVDDTLSASRGTLRGGNLSVSQVRPRLGTAPAASLMSVSAGGSSSSSEYAAAEKPRRDLMSTKTGLIMSLVAMGFPVDARDARGRTSLRESADRGDTEVCRALCLSGADPDALADDGRSPRLISVFSATERPELAELLSPYNEAARQSRASATAENSAAALSQKPVANDGHGPLPSLTVHEIESKRTETKRQLEQLRRSRDANDSGEHAHAHAVQEHTDVVDAVCASVYTHVWPSGDVHKGNWRYGLLHGDGLHLYCESENENASASVDMAASVDSIGGDQSLNASVTSSAAGGSGDARAYAREASVASARSEFNPFDEGESADMPDSPAPIRIARRSTARRGAEAAKEEAQRMCLCS # ORIGINAL: g13067.t1 original gene structure, not modified by PASA NODE_1795_length_9203_cov_42.8466 AUGUSTUS gene 6295 7564 . - . ID=g13067;Name=g13067.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS mRNA 6295 7564 . - . ID=g13067.t1;Parent=g13067;Name=g13067.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 6730 7564 . - . ID=g13067.t1.exon1;Parent=g13067.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 6730 7564 . - 0 ID=cds.g13067.t1;Parent=g13067.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS exon 6295 6629 . - . ID=g13067.t1.exon2;Parent=g13067.t1 NODE_1795_length_9203_cov_42.8466 AUGUSTUS CDS 6295 6629 . - 2 ID=cds.g13067.t1;Parent=g13067.t1 #PROT g13067.t1 g13067 MSAIVDRPPSAQRMSLGFGLDDFATGPTQTGDHSNVDPPTGDLIDFGGFDDDEPVQKNFGASASDVQAESNQKCDDECTKLGATAAFLKQMRETEQLLEDDARIADNGLRVYYFAKRAVCHAIDHKTTEGISALFSIFTPTDSICNESECRALAVGAAALCATCESSSAALTTWRQDLIAAIGRRSPLTVVYRQALEDCDTDSAVRFDWHRAIERAREGLKSTANENGNDVASAVASIAGAVAQYNAAAKADNLDKDTVNAIDETLDAAIKTLGSVNGGLTHAMTAICPSAWIAFHDSVSRGMTIADPASATHEHIDSGRAYAVLRYVTRHWQPVGIKATTRADMSLDQMEKMRAKVSRVVGDPDCLDLLESALLALEKLEKANTGKEE* # PASA_UPDATE: g6937.t1, single gene model update, valid-1, status:[pasa:asmbl_2340,status:12], valid-1 NODE_1691_length_9697_cov_46.978 . gene 4432 6501 . + . ID=g6937;Name=g6937.t1 NODE_1691_length_9697_cov_46.978 . mRNA 4432 6501 . + . ID=g6937.t1;Parent=g6937;Name=g6937.t1 NODE_1691_length_9697_cov_46.978 . five_prime_UTR 4432 4549 . + . ID=g6937.t1.utr5p1;Parent=g6937.t1 NODE_1691_length_9697_cov_46.978 . exon 4432 6501 . + . ID=g6937.t1.exon1;Parent=g6937.t1 NODE_1691_length_9697_cov_46.978 . CDS 4550 6478 . + 0 ID=cds.g6937.t1;Parent=g6937.t1 NODE_1691_length_9697_cov_46.978 . three_prime_UTR 6479 6501 . + . ID=g6937.t1.utr3p1;Parent=g6937.t1 #PROT g6937.t1 g6937 MSPQRIGSRICARTGNNAQLMAVIAVLYAFVVVIVMFQLQHRGLFVRKDGTVESSRPLSQVTAYQALSRNSAEDSLSGDAGHHLQISESTVVNVDDLESASSRALLATQFPSSSAAAGNTIIRPMITSQPDMTKYLVAVQVYGPNNLYYCLVDGIKVARALNRTLVLIPYVDHFFNNNKGYTFRKPVELTFNVDRLKAVLGALGVRTMDDLAFSEVLDRTNRTLDFCLLTHVDNDWSRKETARLLGGSLTCKQSLLINSRNWPEIGDYSAASLQTRFRENVTDVPILSIDTLFWANKFYKPTRRTLLHGGRSYRDEHLQILRGLTHAKGIIDAATAFISAVLGDVEKPSYLAAHWRRADFGDRPNCTNLLQCVDAVSRDDLITLLNSALLTVRSSGELPWSAVPVVYLATNKPVTAEDHQAFAASGYPRVITFNSSIVDPGEPYYESLIEQEICLRSLAFVSSRMSTWSDRVLETRIAFNLGYRHSWSSANMVRSEFDPTPLAIPASALVLSKSLSWPETLVCGYEYMGVSHETPRVMSLICPPGTVVSSVVFASYGAPSGVCHMFVADPRCHDPTSVDVVRELCVGKTACELPVTSTPLTSRGFGMARCDTGGFALAVSLQCTLIPPLTGTSSVTVSVPTL* # PASA_UPDATE: g6936.t1, single gene model update, valid-1, status:[pasa:asmbl_2339,status:3], valid-1 NODE_1691_length_9697_cov_46.978 . gene 2151 4117 . - . ID=g6936;Name=g6936.t1 NODE_1691_length_9697_cov_46.978 . mRNA 2151 4117 . - . ID=g6936.t1;Parent=g6936;Name=g6936.t1 NODE_1691_length_9697_cov_46.978 . five_prime_UTR 3953 4117 . - . ID=g6936.t1.utr5p1;Parent=g6936.t1 NODE_1691_length_9697_cov_46.978 . exon 2958 4117 . - . ID=g6936.t1.exon1;Parent=g6936.t1 NODE_1691_length_9697_cov_46.978 . CDS 2958 3952 . - 0 ID=cds.g6936.t1;Parent=g6936.t1 NODE_1691_length_9697_cov_46.978 . exon 2151 2635 . - . ID=g6936.t1.exon2;Parent=g6936.t1 NODE_1691_length_9697_cov_46.978 . CDS 2209 2635 . - 1 ID=cds.g6936.t1;Parent=g6936.t1 NODE_1691_length_9697_cov_46.978 . three_prime_UTR 2151 2208 . - . ID=g6936.t1.utr3p1;Parent=g6936.t1 #PROT g6936.t1 g6936 MSRCRRSAFMLLILVSCVSFTHWILLGIPANEQNHNEAGNRLQLSYKDRPAIDAKAHSHRDGITEFHQHISDASSADDHNSGRVRHVDAPAHTVHNVQNFRTRVAETFPHQALWKAVRSSFSSKDVQILSSQGKMDIHPVALNLSVSIFDDRLSLQPSGDIILCFAASADRFDLLPTSIAAWDGPVIIGLFCEEASCLHNLESSIGPATYKRRNTAMIVVVGAKGMFYPINAMRNILFSYIPPGRGHGWFMLDSDFVLSMGAYQSLKSSFASTAKRNGGRRALVVPCFEFGKDSYDVGADILLLPRTKEELLRLPQGLVRPSKNNTYAKGHSCTEYERWMYGTDTDPWPQSTYQYEYEPFFIIEKTMDAPGYDEFLLMWGGDKQTYCFLLHLVGYQYYTVPNVFAVHHPHEYALRVDDDSRKDRQLAGNRVYFRLMVLNLCRYFNTTLAANSFSEVGYPVFRRQSPSTVTMHS* # ORIGINAL: g11804.t1 original gene structure, not modified by PASA NODE_105_length_39554_cov_50.3261 AUGUSTUS gene 20615 32446 . - . ID=g11804;Name=g11804.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS mRNA 20615 32446 . - . ID=g11804.t1;Parent=g11804;Name=g11804.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 20615 32446 . - . ID=g11804.t1.exon1;Parent=g11804.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 20615 32446 . - 0 ID=cds.g11804.t1;Parent=g11804.t1 #PROT g11804.t1 g11804 MSLLPSGICAVILFERSLEGSLAAQPMWLCVLLLSALGNLCLDEDICASMVASGRLHRLMALITTDFRHTRARSLPDGTEVLVNAPIDVHVDVGIADESSGPKRRPSDVPRSREGGRANGDGRPFHQLNRSLSTDKLDCSAGTALAPPTLTSGHSSRNSGNSGCATPVVDVRNTSLPPDTLASLLADTPAKLTAGSSNGASTSGPASPLMSGFKDMSGRYLSSRSPVLDASRCALRVTCTLAVTMCGDCTLVGHLAESGYVPALVSMFVPSPRPALLSVDERRRNTAEGGRKRTTTGGGSGAKDGGKENGKRPMASSGGSISGSHDFRLYDDDAGRNQPQLLLEVCGVLVCVLQASFILSPSLLLSLSGFGGYAVLTDMLLRLEVSASREYVRRFVIEMWKLCQIGDEIVADGPEEDHTGEAEGVRNVSAYVALLTAYQSSGSLYTQKQILLVVRRSFLNPANFARLRGTPVFRYLMSDLHARHESVQRTILGFVSMLLKDGYRLEDELKQYCALLGGPSPHSVLLVTHHMERQMRATPRFKRFMHEAGLVPALVTMLCPSLDLPYSAALRSPRECALCLSLLGDLKYGPSVAQSPSATVTGTTDTATSATKTMPKTNTSQGGSAGLNQTDDDIHMPATVAALSVARSRSATYVARDGGQSAVHDLPILHGVTEQLLAMLCTLIEDNGQTQAEFCGCGGLKRLYLLLRDVTLRRPVLRALTILGATASVVEWRIIPDLIRFLSDPTAIPVNTNAAYGVVRAGPGTAKSRTRHPTIFGRGMRPNDVSSSLDNDGFGADTPLHLLERSNLSMRIDTARAIAGIMKRNPSAKAPFCSGGGFAWALRVLGDIGDALTAIRHEGIPVSDAMLACAFDLVDAALGCVAVAIEDHAHNQAHFRASCMAAALIEPLRRTDFINSRHGLDLCETILGASVRGTFPASCLRHASPIDALLPGALRMAVDMLACRDDESNAWRLGETFADVVGTNEAVRSHFLAFLQARGCEHLLLFWLDVERFREDCRNKAIVSAGLQRLRAVFIFNSYVGFRAGSLLPLLDVRQRTEIERRLPQCPPDLFDVAQDATRLAIVRDHYPVFLSSAARAVSPFFPPPTDCGPCRTSLVIAHPELVEVTLRLLANADVSRPLSLSSGLGIGTVQRTVVYCLKEVSFLARTVVANRASLCGHGTIGLLIALFTHVLHDDANAAHHVILDIFVRLARYRMTHMEMREYLSLIQGSAYPTSLTDALVRVAERDVDLPCNYVDFTSADNSSGHVAFSRKEECYWPPAQLGYSVALWVRLRPRPPGAYSPGGSPYKQQAHAAAAAAAASQKGGQVETPRYIEMISLVSAGSKIQLVADTLSGTLALKTGAGHAATLTNFVLQTNRWHHVVVTHTRKGTKGRAGRVTLWVDGAFRSDNKLVYPTPMAGQQVQCHLDCDALSASLEAAHNWQLASALVLEEHVIEAGEAFSLFSLGPNYVGRFKNDPARHHPYELVNEATITSHDPTVVVAEVSLATLSQIPDHIVFLYTARGSLVIQNTTVAQAAAAAGQHAASSGSASSLPSAVPQVAPTGGGTRTLAAFPVKLSGAATLAQRRGIRETVYDVGGMSIFLYLLAKTPRREDVQCSAMRLLFALTQWSAQNRREMESLNGWQLVGKFMRSRRCVLGHWVLPVVLRAVCSVGGGSSPRLPGFGAAIVKNPMALRHVVLDWRIWQRAPEPVQSSLLQTVADLVSAPDNPHIRFNIAQFRCVSALELLLHTFDEQENFPPRVAAALVRIVRAILESPPSMDNVQSLFDYIVASHPRVTYNAQSTSYAAASSSSGTAGGGPAKQSILPIFGESKTESKSNKELKKRNRGISSPMRPSWIGAGVPTGGGQAGKLSRLDQRRLSATPTPTKYLVSLTQVDGLIEQHFEGDAGGPPSSAYPSTPVPPSIHGTSGASLLSATSTATTTTYGNSASLKSPPNVMSTPTPGGNKENIDVSPEEVASDLVWTGEKSSVRESLLKVVLDMLANFPEKVADYSKILKLDVLLPLLLHPSATTRVTLLKIVDILLRRLPPNAAPPHDLKTLLFMLGDQLRQNTVTEEMFAVLVAMMLGEPSHNQLTTDTSASASTSTARVDGDCGNKGLNAGGLAAPHGSLAAILADAFSRATPSSGRGSTHHGSHHGSRQPTPKVELHPRQPLVYGVFVSLLDTCASTKPTLWMSGMHMLQALYMSHPELQKSFLDAGLVDMLCDYASASIVATDILQQKQQAQARAAASALAAAVAAAERQQQQQQQQQQQQQQQQQQQQQHQDDHLTQRVSPPRQTLTIVEEEEDDGGRETNTSAQFHTPKRDSVSLNAAAAIVQRRGMQRRSLTPLSIVVSPTLSSATLPGEDPPSAASQDSPRTPDTQSPRVQQVQATAEERQLMLARSLDFLQTVAVVACRSGGVGFNLVREILASLTRWEDDPDNRASVIAQSPPLRMSAILEPFATLAVGPGGDGTMPGQAVTVLPLVQTKQMLHMQRRVLREVLEYYCAKLKPGPEVFSRSDKFARAFVSLCAHTVDHILYSETPYGPMGTPGWHKSTPSPAPSPDRSAEDGFVFIRFVFHVLRLVFPRDIAGDEDLVESLALLTAHVPVRDQLGRLLLHLVSPNQPRFIRSFVVRWLYDHRGMLASFSGDVEFNALMVMFGWEYHEASNAQSPFDGDTDNVNSASAASVHGSDGGQSTHSRRTSKYTAPASPAQPPQDDILRSMALATACTVYESHKGILRDYVDAAHSRQDGAHHPRAIAFSFTPACEQIVRVREDREMSAAGKWRDERAKARVRRMEEAQRMSATARAARADSIHVVSAAISLQTQQRANYFFRIRDDLEAERRVQRQWKAVIRQATHERAPWASVPYATAWQLDATEGPNRMRRRLKPCVKLFRYPPPREQERSNSTTEGGERRRSSTADSAMSPSLSGSGPSAPSASPRPSRDSVSRAEAARAATALVAAAEYAKGLKLRYAWLIGRVRDHLARKLQPVAVGVLRAEARTAIYKSIIDELVDLALVIGDVPTPGELNILVKNDAFGPHSIVSRAASLLIGGTTGGSREHPLAYLFSHDDGAAATPLGHNLEPGESILLVMKAMRITPHKRNDGELLIGNNHVYFVDDCVFDGVGDGAANALKNAVSPTEERTGGDVSIAVPTMNAVFSGSDGPSLQPWGNGGAHYTFWSLEDIKEIHRRRYLLKNNALEIFLTNGKTFLLAFSTTADRNRVYSELRSLHLPNFVDYEDEVQGSLLRKSITETWVAGRMSNFEYLMHLNTLAGRSFNDLNQYPVFPFILSDYTSDELDLSNPSAFRDLTKPMGAQDPARLQRYLRQYELLQELGEDKLFLYGSHYSTQGSVLHFLIRLEPFTRYFIQFQGGRFDWPDRMFHDMARTWRGSSADSSSDVKELIPEFFYLPEFFSNADAHDFGVMDNGHRVGDVVLPAWARNDPRMFVLKHRQALESRHVSANLHHWIDLIFGHKQTGPEALKANNLFYPLTYEGAVDVDTITDDVARRAVIEQIQGYGQTPRRLFTRPHPPRNVEAAAAVASNPSMLCNSSRDIPPTMCWERLVTEPVRFLEVIDGYPVAMGPNKHPLRPDATKYYVSWGHWDRNLRVCSVETNRVVSAHEPLHDDEVTCACAPPDGRVMVTGGLSGSVCVWRVGGQGRRVELQPMSALCGHARAVRSLCLSRDFTVALSGSDDATCIVWDLNRLTYVRTLRGHEGPVVAAALSPTTGDIVTVCEMVLTPGRGGSVSRGHRSSIAPPSSSSSSSSSPSASSLHGQQQHPPNGAYMQHGHALGVGSSMASSHQTAPFAVGGALRLWTINGEHVATVHTDSRLLCACFSAATEGVHVNLIAAGSETGRVHVWTAWDLSPVWELSPPLADPAVSLIPSPITAIAFGPDCTELLTGDESGRVCGWGRQKTQRGLLSLRAAPYVVTLKGGGYVIDSDAS* # PASA_UPDATE: g11800.t1, single gene model update, valid-1, status:[pasa:asmbl_225,status:3], valid-1 NODE_105_length_39554_cov_50.3261 . gene 5627 7641 . + . ID=g11800;Name=g11800.t1 NODE_105_length_39554_cov_50.3261 . mRNA 5627 7641 . + . ID=g11800.t1;Parent=g11800;Name=g11800.t1 NODE_105_length_39554_cov_50.3261 . five_prime_UTR 5627 5929 . + . ID=g11800.t1.utr5p1;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . five_prime_UTR 6040 6103 . + . ID=g11800.t1.utr5p2;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . exon 5627 5929 . + . ID=g11800.t1.exon1;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . exon 6040 6985 . + . ID=g11800.t1.exon2;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . CDS 6104 6985 . + 0 ID=cds.g11800.t1;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . exon 7098 7641 . + . ID=g11800.t1.exon3;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . CDS 7098 7376 . + 0 ID=cds.g11800.t1;Parent=g11800.t1 NODE_105_length_39554_cov_50.3261 . three_prime_UTR 7377 7641 . + . ID=g11800.t1.utr3p1;Parent=g11800.t1 #PROT g11800.t1 g11800 MAPQERCGPHFPTTGAGQLAPSGGGGFTTSRPGNFDSQQAWSRPASTAFRTVSVHKRTEATPPPSESNFNRNQQQPPPLATSPMRPSEAIGSPHFLPVPSQPMPAGYSYSGVPYGYLPQSSAQEYWQQRQRQAFFVPQQQQFYSHEQGYAFGPTVHQVMVPYAQHTAQHQSLPGSFAQMQAMSPVSEPVSTDNSSPRGIVAHNQSQMRPNNLNNHAQPAQNAQNSSRGNARASQSANTVQSGRVEKQKRTRASTVRKRMSSPQTVALEDLFNSNPKPSSATQKNIAQTLDVSFERVQIWFQNRRAKHKRESRASRSPSRHSTASSQASPGQSVSDAEAAEALTMVGVSIRHDASSVASSQSYRMSLPHEQPGPYRPATSNDFSGTR* # PASA_UPDATE: g11799.t1, single gene model update, valid-1, status:[pasa:asmbl_221,status:12], valid-1 NODE_105_length_39554_cov_50.3261 . gene 2324 3966 . - . ID=g11799;Name=g11799.t1 NODE_105_length_39554_cov_50.3261 . mRNA 2324 3966 . - . ID=g11799.t1;Parent=g11799;Name=g11799.t1 NODE_105_length_39554_cov_50.3261 . five_prime_UTR 3907 3966 . - . ID=g11799.t1.utr5p1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . exon 3901 3966 . - . ID=g11799.t1.exon1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . CDS 3901 3906 . - 0 ID=cds.g11799.t1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . exon 3688 3780 . - . ID=g11799.t1.exon2;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . CDS 3688 3780 . - 0 ID=cds.g11799.t1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . exon 3362 3459 . - . ID=g11799.t1.exon3;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . CDS 3362 3459 . - 0 ID=cds.g11799.t1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . exon 2995 3103 . - . ID=g11799.t1.exon4;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . CDS 2995 3103 . - 1 ID=cds.g11799.t1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . exon 2324 2477 . - . ID=g11799.t1.exon5;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . CDS 2394 2477 . - 0 ID=cds.g11799.t1;Parent=g11799.t1 NODE_105_length_39554_cov_50.3261 . three_prime_UTR 2324 2393 . - . ID=g11799.t1.utr3p1;Parent=g11799.t1 #PROT g11799.t1 g11799 MMLSKEDEVDAEVNWEDQQKINMFGRLNHRKEEVGDELEARKKERENVKDAADELLLLEGDQDVVSFRVGEVFVHVSNERAQELLNEKLAKLDDDVDRLGNEVDSIKSTMSQLKVALYAKFGKSINLEA* # ORIGINAL: g11801.t1 original gene structure, not modified by PASA NODE_105_length_39554_cov_50.3261 AUGUSTUS gene 9234 13223 . + . ID=g11801;Name=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS mRNA 9234 13223 . + . ID=g11801.t1;Parent=g11801;Name=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 9234 9567 . + . ID=g11801.t1.exon1;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 9234 9567 . + 0 ID=cds.g11801.t1;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 9697 10005 . + . ID=g11801.t1.exon2;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 9697 10005 . + 2 ID=cds.g11801.t1;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 10095 10897 . + . ID=g11801.t1.exon3;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 10095 10897 . + 2 ID=cds.g11801.t1;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 11279 11640 . + . ID=g11801.t1.exon4;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 11279 11640 . + 0 ID=cds.g11801.t1;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 11849 13223 . + . ID=g11801.t1.exon5;Parent=g11801.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 11849 13223 . + 1 ID=cds.g11801.t1;Parent=g11801.t1 #PROT g11801.t1 g11801 MARLVPLPLIAAAIVAVMLVLAYDVHATASLAPSVAEFRNASLPRLYPSVVDDGVASGAFVVVVGDLRLTLSTARWTLRVVDSVSGNTLLSQSDEFGGLIALGKYVEVFNAGFLYQGYQIRAGLNTVWSHADHVRSVTVDEASGNITCTVRLNGLYARGDIDITLHSFQKRQFSLSLRPSAELAGKFNRISIGFHSPMHEGFYGLGMRYTAINQREGCDVFPDALLSSLGYAFEIDSNYETHFDFASEGISEHIFAVAVFAIFLGAALAWSGASRAARGVSKAAELVFHNDVEEDADAHDGVAPSRGHLRSNKCCCCCPRPSFKFVMLSYAVLLILRVFLGFTDIVSSAPDLQFCLAAATYYATTRWLRNPRACTIILSFAVALYIGVVAGASIDSKLVTVLTEADATDFNLYFGETPTQSLRMFTDKTGRYPVPAKWLFGPWYLLRGGAIEESPFGKSGADAAEAFVQRDIPVAQMMREVQFLPEMPFDDQFATLRAENDKFHSLGVKTTCYFNEFVHARRFHNRTTAVFNEAKRLGVLTKDKAGDPYTMHFHVGIEGFRIRIGGEQVAQFDFSNPSAVAFYQGLLLFAANLGYDGWKYDYGEYTPQDALSFDGTDGAAMHNLYPVLYQQACQSLFERMDANKTKPGYGPDHIFFVRSGYTGTQRVTPAVWTGDSCSDWTAAFGLPAHLIAMLNLGLSGVPVSGSDAGGFVWVLQPPPSLELNVRWTQLSAFSGLMEYMAGGFGIRNKTRILDTPEGVALYRRYAKLRTQLFPHIYAAAHAARDEGLPIMRHHLLDFPHDAEAVSVGGTQFMFGEALLVAPVLAPGETMRGVYLPVTSGAQWHDVGSRLQYDESDGRFRIARASGAAAYDGGQHVTVPAPLETTPLFALGGSVVFLVDPAVDTVNDDIATSPLVTTLAARAHVMHAWVWPTASGAARGESYDGAVLSVGPVHAGITDANTTQSVLPIRLESDDIVDVERSLVLQVSVAAADGARVAVDGVAMAASWADVAADDAPVPSWYVDADAGTIWARISRHSPSLEIVCTLSSEHVTEAPCLAFV* # ORIGINAL: g11803.t1 original gene structure, not modified by PASA NODE_105_length_39554_cov_50.3261 AUGUSTUS gene 19340 19862 . + . ID=g11803;Name=g11803.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS mRNA 19340 19862 . + . ID=g11803.t1;Parent=g11803;Name=g11803.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 19340 19466 . + . ID=g11803.t1.exon1;Parent=g11803.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 19340 19466 . + 0 ID=cds.g11803.t1;Parent=g11803.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 19693 19862 . + . ID=g11803.t1.exon2;Parent=g11803.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 19693 19862 . + 2 ID=cds.g11803.t1;Parent=g11803.t1 #PROT g11803.t1 g11803 MSFRHSRGFQRLSLAALWIATATTAANVGYVYWGLSNKKFGTREERFEKFEDSVSDFFTSMKEFSEKYFPVQTAAASADGARRPTKSNDAVAADEKSA* # ORIGINAL: g11806.t1 original gene structure, not modified by PASA NODE_105_length_39554_cov_50.3261 AUGUSTUS gene 36206 39451 . - . ID=g11806;Name=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS mRNA 36206 39451 . - . ID=g11806.t1;Parent=g11806;Name=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 39438 39451 . - . ID=g11806.t1.exon1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 39438 39451 . - 0 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 38370 39347 . - . ID=g11806.t1.exon2;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 38370 39347 . - 1 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 38071 38145 . - . ID=g11806.t1.exon3;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 38071 38145 . - 1 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 37688 37797 . - . ID=g11806.t1.exon4;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 37688 37797 . - 1 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 37521 37580 . - . ID=g11806.t1.exon5;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 37521 37580 . - 2 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 37158 37237 . - . ID=g11806.t1.exon6;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 37158 37237 . - 2 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 36631 36754 . - . ID=g11806.t1.exon7;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 36631 36754 . - 0 ID=cds.g11806.t1;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS exon 36206 36342 . - . ID=g11806.t1.exon8;Parent=g11806.t1 NODE_105_length_39554_cov_50.3261 AUGUSTUS CDS 36206 36342 . - 2 ID=cds.g11806.t1;Parent=g11806.t1 #PROT g11806.t1 g11806 MRMQFRAAVGITCLAAYDINGDGEHEILAGREDGSVEVWGFYNGPTDAPILLFRRTLPESITSIAGGRVASPSHDEVVVATFSGRVCGFTMEPRESAPLPAPNMPDMTADATVLMAVADRAKRGAEKSVKGLRDEIEELKKQIAKERLKLSKRTSVGAGSVAAETPLRDRFMLVAADGTHSLLLEMVETIDFVMIQCDCALDVVDSFVQHAVLARTQPEADSGSSLLATFRCNEGVRRLEVRLRSMEGQHGTLRVYVVTRASKTCEVREYAIRALSLHCKWVGGVTPGHHGEDDSDRKDDVPMNTLKLSGTFSLSEIHSWVALCVPDIPERTPLEESVELEFRSSLANTRLICSYRKNEGIFRSDSISTISILKDCLTKEATSRKIKLTINFADVFPVMCMEFAMLMFARPIYFKEETVPHVLGLLHPQLEHQTQLARKELKEHAHGGDTLSAEHSEVLANSASILAEFNARPKLKERLFGVVTDLYLDKFKVKGQNMRSRAPQLLECLEHYSRESLAAFFAERL* # PASA_UPDATE: g11798.t1, single gene model update, valid-1, status:[pasa:asmbl_224,status:12], valid-1 NODE_105_length_39554_cov_50.3261 . gene 283 2144 . + . ID=g11798;Name=g11798.t1 NODE_105_length_39554_cov_50.3261 . mRNA 283 2144 . + . ID=g11798.t1;Parent=g11798;Name=g11798.t1 NODE_105_length_39554_cov_50.3261 . exon 283 468 . + . ID=g11798.t1.exon1;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . CDS 283 468 . + 0 ID=cds.g11798.t1;Parent=g11798.t1;5_prime_partial=true NODE_105_length_39554_cov_50.3261 . exon 667 801 . + . ID=g11798.t1.exon2;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . CDS 667 801 . + 0 ID=cds.g11798.t1;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . exon 1064 1153 . + . ID=g11798.t1.exon3;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . CDS 1064 1153 . + 0 ID=cds.g11798.t1;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . exon 1363 1495 . + . ID=g11798.t1.exon4;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . CDS 1363 1495 . + 0 ID=cds.g11798.t1;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . exon 1729 2144 . + . ID=g11798.t1.exon5;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . CDS 1729 1910 . + 2 ID=cds.g11798.t1;Parent=g11798.t1 NODE_105_length_39554_cov_50.3261 . three_prime_UTR 1911 2144 . + . ID=g11798.t1.utr3p1;Parent=g11798.t1 #PROT g11798.t1 g11798 VLIGRFVLSHVTTDKVHEMYTFMVGLYSLWASAAALSYAMAAVRWCRNWRVLVDVAVVVAKKVATYLVIMAVFGGVLPLLLGLLFDCIVVIPSRVSLSESPLFFVAQDWALGVLYVKLGHSLLPLFPESDLKSAVETWEMSGLAELGLRSALRRIALPLCADLAFALALPYVFARGIVPALGLGHRAEALAFRHSFQAFFFCAALARVLPRMRVWMGSLYGTVRDDRYLIGRQLVNYQGRR* # PASA_UPDATE: g11802.t1, single gene model update, valid-1, status:[pasa:asmbl_222,status:3], valid-1 NODE_105_length_39554_cov_50.3261 . gene 14126 18983 . - . ID=g11802;Name=g11802.t1 NODE_105_length_39554_cov_50.3261 . mRNA 14126 18983 . - . ID=g11802.t1;Parent=g11802;Name=g11802.t1 NODE_105_length_39554_cov_50.3261 . five_prime_UTR 18874 18983 . - . ID=g11802.t1.utr5p1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 16907 18983 . - . ID=g11802.t1.exon1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 16907 18873 . - 0 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 16597 16739 . - . ID=g11802.t1.exon2;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 16597 16739 . - 1 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 16282 16374 . - . ID=g11802.t1.exon3;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 16282 16374 . - 2 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 15931 16097 . - . ID=g11802.t1.exon4;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 15931 16097 . - 2 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 15539 15675 . - . ID=g11802.t1.exon5;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 15539 15675 . - 0 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 15285 15382 . - . ID=g11802.t1.exon6;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 15285 15382 . - 1 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 14829 15048 . - . ID=g11802.t1.exon7;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 14829 15048 . - 2 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 14524 14626 . - . ID=g11802.t1.exon8;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 14524 14626 . - 1 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . exon 14126 14337 . - . ID=g11802.t1.exon9;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . CDS 14188 14337 . - 0 ID=cds.g11802.t1;Parent=g11802.t1 NODE_105_length_39554_cov_50.3261 . three_prime_UTR 14126 14187 . - . ID=g11802.t1.utr3p1;Parent=g11802.t1 #PROT g11802.t1 g11802 MDVSYLCALPAPHPLAHIQLGISSKYVAIPYGQGKAAVFARDDPHALLIELGKAHTGQIAKCAFGNKSSVRTSLCTVSSDCAVVWHVEDAIRDAAGKHRPVAQMLDWSSTESGPCEHVFFSPDDTIVGLCAGFDVLLFDAAAGSVHSRLEGHTATVTAAAFSPHRRNSLVVSISEDRTFKVWDITEGSLVYQSSIVSSSPFISLAMDPLADRFAIGSEDGAVRFYDAASGANFRCLHTFDVARAIRENRSALDRQAAVAQKRAGPQVISSKKGSSSIADSYSFMDAPSADRQGDDSEGVSTSPAVLCMHYAHPTPPLGASSASRASVGDSTLLVVGTAGALAQIDTRSYDAVGVADFCAPVRGAGKASDKNVLYTLPTAGAYGFSGGIVAGSVVAALGCAFERSVCILSLSPCERGGPVPRDTPVKLLLQRIAEKCRWPDSIVSECAHALSKVSCSTAGDLETLTPDEWHDIQLPSLVRGMLWDCIGTAPDQNQRGAPQSGLASGAGASATPTVLTVVPSNPLSESSPLRSEMAPPVPPTQPQPPGKKGGSSATSGASAAQKTLSTTAAKSVAGKAGGSGVSSVGGKKKVAAVVDKPLTFNSKIKSSGYGAPAAAPVMFAGIKARPVPASSKAKGASASSVAGGLPAPRARPVEKRSTSSPAINATAPRKYPRDSAAPTVLDARLPAQGVLLHPSAINRVAFSADGKMLATAGCDKNACVLKLPIAANNCTSYRGHNGPVTTVQFNSTSTMLLTSASDATARLWAVGQTEPLLVFSHSRRSYREGESADKPNPPFAGEVRQARMYYMDKFVMIAAGGGLHMFKFHADDERVDDVKRYKTNNRYKLVKEFQMGNAQGMTDFGCVNGFHSYAVVCAGTDRSIEVFDMNVGKSAVTIADAHTRSIHAVRLLDSTPHSCHTPTDHDLFATAAAGDAIKLWDIRTQKCVRRFEGHSNRALPVGFAFSPCGRFLATGSEDRCAYVYDIGSGTYTHKLQGHSDSVVDVDFHPIVPMLVTATLDGKLRAFLDS* # PASA_UPDATE: g11805.t1, single gene model update, valid-1, status:[pasa:asmbl_226,status:12], valid-1 NODE_105_length_39554_cov_50.3261 . gene 33448 35849 . + . ID=g11805;Name=g11805.t1 NODE_105_length_39554_cov_50.3261 . mRNA 33448 35849 . + . ID=g11805.t1;Parent=g11805;Name=g11805.t1 NODE_105_length_39554_cov_50.3261 . five_prime_UTR 33448 33494 . + . ID=g11805.t1.utr5p1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 33448 33911 . + . ID=g11805.t1.exon1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 33495 33911 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 34114 34227 . + . ID=g11805.t1.exon2;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 34114 34227 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 34391 34873 . + . ID=g11805.t1.exon3;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 34391 34873 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 35109 35228 . + . ID=g11805.t1.exon4;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 35109 35228 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 35444 35539 . + . ID=g11805.t1.exon5;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 35444 35539 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . exon 35694 35849 . + . ID=g11805.t1.exon6;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . CDS 35694 35750 . + 0 ID=cds.g11805.t1;Parent=g11805.t1 NODE_105_length_39554_cov_50.3261 . three_prime_UTR 35751 35849 . + . ID=g11805.t1.utr3p1;Parent=g11805.t1 #PROT g11805.t1 g11805 MKLHLDAMVIQQGRLAENQKSVDKDEVLSMIRFGADRIFSAKEGTITDADIDGILAHGQKRTEEFATKLKTAGESKLRGFSLDTESSVYDFEGQDWRQKQSKALLTHWIEPPKRERKQTYSVDAYFRDALRMSEPSKPKAPRPPKQPTINDFQFFPPRLMELLQQEIYAYRKQINYKPPKPSREDMASNPDAEGEWRAEVEKIEQSEPLTEEETAEKESLLKDGFTDWSRADFKAYCRACERFGRSDFASIAREVEGKTAKEVKDFHTVFWKRGAELSEWGRILKNIEAGEQKIRRKEEIQKVLRSKMGLYKNPAHQLRVVYSTNKGKNYTEEEDRFLVCMLHRLGYGSETAYEDLRRAIREAPQFRFDWFLKSRTAAELQRRCTTLITLIEKEMGLDNDDDDDRKRKSDGKRKSEDAMGPAKKKLKK* # PASA_UPDATE: g5990.t1, single gene model update, valid-1, status:[pasa:asmbl_1698,status:3], valid-1 NODE_1471_length_11085_cov_40.273 . gene 1165 3899 . + . ID=g5990;Name=g5990.t1 NODE_1471_length_11085_cov_40.273 . mRNA 1165 3899 . + . ID=g5990.t1;Parent=g5990;Name=g5990.t1 NODE_1471_length_11085_cov_40.273 . five_prime_UTR 1165 1215 . + . ID=g5990.t1.utr5p1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . exon 1165 1880 . + . ID=g5990.t1.exon1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . CDS 1216 1880 . + 0 ID=cds.g5990.t1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . exon 2153 2425 . + . ID=g5990.t1.exon2;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . CDS 2153 2425 . + 1 ID=cds.g5990.t1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . exon 2657 2939 . + . ID=g5990.t1.exon3;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . CDS 2657 2939 . + 1 ID=cds.g5990.t1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . exon 3271 3899 . + . ID=g5990.t1.exon4;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . CDS 3271 3633 . + 0 ID=cds.g5990.t1;Parent=g5990.t1 NODE_1471_length_11085_cov_40.273 . three_prime_UTR 3634 3899 . + . ID=g5990.t1.utr3p1;Parent=g5990.t1 #PROT g5990.t1 g5990 MLSSLLQGAGLLTLVANVMSLNRPVNAVQYLAWLVPGVFEYASFLAIWLSLFLFIFAARASFLPPTYETRKRWVWALVYHSLCTGVASLQFIGNLLTRAYGMPMLSAGVLAATAINTIRVAKTPKGDSTAMARIARRISFSASESALLIDDDEVPSPRKNVRQTNCCTRIAVIVFDIAVFVLFALLLGGTWSLGIGYAVHGPRGVLVNISEDRHRVQNVHVWCTGRHNSSLPTFWLEVGGGGHSMSDLYGLQFALNERGRRVCQYDVLGTGWSDPPMPFQDDMDVMEKVAMIIDEGPYIMVATMDDAPARIYRYALKYPFDVKALVPIDYAGGPEFLPMEIVNNWTRPQTLSYARSTIAGRVRLGNLIRAIAVQWGIIPFFVPLGDDYVPANMEREKLLLNIYNEKQWTRQTMVLQSQVDNIEVIFEEDVWTSNRTLDESIPVFAFAKTENVTQSCADANAPLDSVTCKVINETAAYRTRFAQQMASVTPGGKLFECTDDCKGFLTGAAKLPWLVERLIGAVDSILV* # ORIGINAL: g5989.t1 original gene structure, not modified by PASA NODE_1471_length_11085_cov_40.273 AUGUSTUS gene 268 411 . - . ID=g5989;Name=g5989.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS mRNA 268 411 . - . ID=g5989.t1;Parent=g5989;Name=g5989.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 268 411 . - . ID=g5989.t1.exon1;Parent=g5989.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 268 411 . - 0 ID=cds.g5989.t1;Parent=g5989.t1 #PROT g5989.t1 g5989 MARRPSDVGVKSGEVDPVRGSRHVRTLEVLEKSQEQSRALQNRIDYLE # ORIGINAL: g5991.t1 original gene structure, not modified by PASA NODE_1471_length_11085_cov_40.273 AUGUSTUS gene 5373 9446 . + . ID=g5991;Name=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS mRNA 5373 9446 . + . ID=g5991.t1;Parent=g5991;Name=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 5373 5921 . + . ID=g5991.t1.exon1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 5373 5921 . + 0 ID=cds.g5991.t1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 6117 6587 . + . ID=g5991.t1.exon2;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 6117 6587 . + 0 ID=cds.g5991.t1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 6884 7340 . + . ID=g5991.t1.exon3;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 6884 7340 . + 0 ID=cds.g5991.t1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 7543 8607 . + . ID=g5991.t1.exon4;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 7543 8607 . + 2 ID=cds.g5991.t1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 8850 9090 . + . ID=g5991.t1.exon5;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 8850 9090 . + 2 ID=cds.g5991.t1;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 9269 9446 . + . ID=g5991.t1.exon6;Parent=g5991.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 9269 9446 . + 1 ID=cds.g5991.t1;Parent=g5991.t1 #PROT g5991.t1 g5991 MEATEVVPAGLGGGLRRTKMRFDDSDSLAHTFSEDSGVVLNDSLSSRSEESGVFAHDWATDPAASRNDDTLASFRSEAHSSGTFSAVAAHAQAHVGMKKRPSLKVATATKTVCRICEQQVDSNVLKRHSKACAMINKCEADIEATDELLLAGMTAAERRVCAVENKSNFIKQRLHRKEMKAMKELIAIVKRALSLDETDKVAKERDVLLKDLESLALSVPDALETRQKLRFAITKKADAILQQRKLRAENADVFALMSTRTSTVMPTINDFSLLKTISRGAFGQVYLARKRRTGDYYAIKVLSKEEMVRRNQVEHVKNERLALATINSPFVIRLYYCFQTVTCMDEAWARFYTAELVLALEHIHSLGIVHRDIKPENLLISKDGHIKLADFGLCKIMKDSDRFRTDAPADGEGSDDISDTNDPTGALVNDSQLSLLQQLRRKFKLGVISDGKIAPEKKASRKTTTREKLAERRSSYRERTSRSAMYSDVGTTDYMAPEVILGCRHGPSVDWWALGVCLFEFLVGVPPFYEPNPLETFRNIVERNVEWPEELSADAVDLIDQLLTTDVSVRIGANTLPGQRSAVRDHPFFSGTAWEGLSRMQAAFIPNVSGIEDTQNFRMTDKGKGSNEVPSEGDGSDGSDPGHSPARRGVPSPNANVVSPIAEGEVMEGEKSQLTEEERRLHADPENFGIFTFKNWNFLDDVNQTISDDGMKTSLPDTSIAGAGSVARKISTLEQDAMFAPATISEEAEEFGLYDALSKDVRSRMLGSRASTGSMGSMAIAAALSSMRLGKPPGCGDSSEEDEDDEDSLPLAARLGLSRDDEEAPDAPGAPVPVPAPATQQPPPAAAAVLERWDSQADATTIRCLVAEDNPVTQRIVQALMRQMGIAVEQAFDGRQAVDMALHTRYDIIFMDMMMPKMCGDEAAALIRTTATNPNREVPIIAFTAMDEDRKAFKKQGFTDLLCKPITRPELYQTLQKYVPNIHAKM* # ORIGINAL: g5992.t1 original gene structure, not modified by PASA NODE_1471_length_11085_cov_40.273 AUGUSTUS gene 10683 10961 . - . ID=g5992;Name=g5992.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS mRNA 10683 10961 . - . ID=g5992.t1;Parent=g5992;Name=g5992.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS exon 10683 10961 . - . ID=g5992.t1.exon1;Parent=g5992.t1 NODE_1471_length_11085_cov_40.273 AUGUSTUS CDS 10683 10961 . - 0 ID=cds.g5992.t1;Parent=g5992.t1 #PROT g5992.t1 g5992 MLPPDANFFGADNKEPFPLSPTPELIARVRDAGGYYFTLSPEVDCCEGVMTTRPVTLFVPRGWWHWVLGRSEWHVAYGVSRFAEPKTKDVKR* # PASA_UPDATE: g8953.t1, single gene model update, valid-1, status:[pasa:asmbl_7173,status:12], valid-1 NODE_4279_length_1887_cov_34.7643 . gene 260 1795 . + . ID=g8953;Name=g8953.t1 NODE_4279_length_1887_cov_34.7643 . mRNA 260 1795 . + . ID=g8953.t1;Parent=g8953;Name=g8953.t1 NODE_4279_length_1887_cov_34.7643 . exon 260 352 . + . ID=g8953.t1.exon1;Parent=g8953.t1 NODE_4279_length_1887_cov_34.7643 . CDS 260 352 . + 0 ID=cds.g8953.t1;Parent=g8953.t1;5_prime_partial=true NODE_4279_length_1887_cov_34.7643 . exon 623 746 . + . ID=g8953.t1.exon2;Parent=g8953.t1 NODE_4279_length_1887_cov_34.7643 . CDS 623 746 . + 0 ID=cds.g8953.t1;Parent=g8953.t1 NODE_4279_length_1887_cov_34.7643 . exon 1046 1795 . + . ID=g8953.t1.exon3;Parent=g8953.t1 NODE_4279_length_1887_cov_34.7643 . CDS 1046 1296 . + 2 ID=cds.g8953.t1;Parent=g8953.t1 NODE_4279_length_1887_cov_34.7643 . three_prime_UTR 1297 1795 . + . ID=g8953.t1.utr3p1;Parent=g8953.t1 #PROT g8953.t1 g8953 KCHQIHNYNALMAIVAGFVSSSIHRLKKAWEAVPAKEKEILDRLNEIASGASNHAKYRQELHMVDPPCIPFLGIYLTDLTFIEEGNPDFLKEQPDVINFKKRRQYADVINQLRQFQSVAFNFMPVRQIMQFLTDLQMPYNEEELYQLSLKAEPRE* # PASA_UPDATE: g1600.t1, single gene model update, valid-1, status:[pasa:asmbl_6689,status:12], valid-1 NODE_3898_length_2548_cov_39.5475 . gene 780 2465 . + . ID=g1600;Name=g1600.t1 NODE_3898_length_2548_cov_39.5475 . mRNA 780 2465 . + . ID=g1600.t1;Parent=g1600;Name=g1600.t1 NODE_3898_length_2548_cov_39.5475 . five_prime_UTR 780 941 . + . ID=g1600.t1.utr5p1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 780 982 . + . ID=g1600.t1.exon1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 942 982 . + 0 ID=cds.g1600.t1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 1239 1311 . + . ID=g1600.t1.exon2;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 1239 1311 . + 1 ID=cds.g1600.t1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 1475 1547 . + . ID=g1600.t1.exon3;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 1475 1547 . + 0 ID=cds.g1600.t1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 1832 1910 . + . ID=g1600.t1.exon4;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 1832 1910 . + 2 ID=cds.g1600.t1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 2066 2113 . + . ID=g1600.t1.exon5;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 2066 2113 . + 1 ID=cds.g1600.t1;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . exon 2342 2465 . + . ID=g1600.t1.exon6;Parent=g1600.t1 NODE_3898_length_2548_cov_39.5475 . CDS 2342 2465 . + 1 ID=cds.g1600.t1;Parent=g1600.t1 #PROT g1600.t1 g1600 MEPALLEYEKANNRLIDAMRRSEFQDVLTLYFLEEDLKAALLIPLSHSLLNIPITRAFVETHVILRTSERPSEFVTLKGHKGAFSGQGWQSVHLEFGDSSANGNGKHVGVVGKGRMDVGNFPIIFAIIHRPLTYPGCPWEAETFG* # ORIGINAL: g11739.t1 original gene structure, not modified by PASA NODE_2736_length_5284_cov_37.4525 AUGUSTUS gene 3568 5184 . - . ID=g11739;Name=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS mRNA 3568 5184 . - . ID=g11739.t1;Parent=g11739;Name=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS exon 5094 5184 . - . ID=g11739.t1.exon1;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS CDS 5094 5184 . - 0 ID=cds.g11739.t1;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS exon 4576 4721 . - . ID=g11739.t1.exon2;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS CDS 4576 4721 . - 2 ID=cds.g11739.t1;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS exon 4028 4145 . - . ID=g11739.t1.exon3;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS CDS 4028 4145 . - 0 ID=cds.g11739.t1;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS exon 3568 3710 . - . ID=g11739.t1.exon4;Parent=g11739.t1 NODE_2736_length_5284_cov_37.4525 AUGUSTUS CDS 3568 3710 . - 2 ID=cds.g11739.t1;Parent=g11739.t1 #PROT g11739.t1 g11739 MSSKQRVPALRQVVKVVKKKARDPRFDDLSGHFNRDLYEKSYSFIDEMKQKEMGDVRKNMDKEKDVNRKRDLQALLDRMKHESRVKKESKETSALLSERKKIERGLVAQGKKPFYLKKTDERKLELVAKYEKLKESGGVESFLEKRRRRNATKDHRFMPYARNDK* # PASA_UPDATE: g11738.t1, single gene model update, valid-1, status:[pasa:asmbl_4912,status:12], valid-1 NODE_2736_length_5284_cov_37.4525 . gene 199 3159 . + . ID=g11738;Name=g11738.t1 NODE_2736_length_5284_cov_37.4525 . mRNA 199 3159 . + . ID=g11738.t1;Parent=g11738;Name=g11738.t1 NODE_2736_length_5284_cov_37.4525 . five_prime_UTR 199 200 . + . ID=g11738.t1.utr5p1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 199 287 . + . ID=g11738.t1.exon1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 201 287 . + 0 ID=cds.g11738.t1;Parent=g11738.t1;5_prime_partial=true NODE_2736_length_5284_cov_37.4525 . exon 619 772 . + . ID=g11738.t1.exon2;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 619 772 . + 0 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 995 1126 . + . ID=g11738.t1.exon3;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 995 1126 . + 2 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 1410 1598 . + . ID=g11738.t1.exon4;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 1410 1598 . + 2 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 1807 1929 . + . ID=g11738.t1.exon5;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 1807 1929 . + 2 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 2162 2238 . + . ID=g11738.t1.exon6;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 2162 2238 . + 2 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . exon 2716 3159 . + . ID=g11738.t1.exon7;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . CDS 2716 2862 . + 0 ID=cds.g11738.t1;Parent=g11738.t1 NODE_2736_length_5284_cov_37.4525 . three_prime_UTR 2863 3159 . + . ID=g11738.t1.utr3p1;Parent=g11738.t1 #PROT g11738.t1 g11738 VVRLASPVFNYSFLKREYNKARNHQLPPKVGSLQLFVRGYRDAIDHLYRFEKEPLSASAEKQFQLQFERLVVLDYLIRNTDRGNDNWLIKVDEPTLTTASRRVQSPNSMSNLPQQTIGQRNSGQSPSVPAVEGGEVSLPDTASSNTSANDLHVLGEEWNVVTEPTIKIAAIDNGLAFPIKHPDSWRTYPYHWAWLPQAKKPFSPETIDAVLPLLQDPTFMEDIEEELTRLFLQDSGTDKGNVERQMSVFRGQVQNLVKGLQDAITPNQLVQLPVFVVEKKKDRQWVRWVQKFRTRAPFFSWC* # ORIGINAL: g13710.t1 original gene structure, not modified by PASA NODE_3372_length_3603_cov_40.5669 AUGUSTUS gene 49 1279 . - . ID=g13710;Name=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS mRNA 49 1279 . - . ID=g13710.t1;Parent=g13710;Name=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS exon 901 1279 . - . ID=g13710.t1.exon1;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS CDS 901 1279 . - 0 ID=cds.g13710.t1;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS exon 634 766 . - . ID=g13710.t1.exon2;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS CDS 634 766 . - 2 ID=cds.g13710.t1;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS exon 323 414 . - . ID=g13710.t1.exon3;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS CDS 323 414 . - 1 ID=cds.g13710.t1;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS exon 49 152 . - . ID=g13710.t1.exon4;Parent=g13710.t1 NODE_3372_length_3603_cov_40.5669 AUGUSTUS CDS 49 152 . - 2 ID=cds.g13710.t1;Parent=g13710.t1 #PROT g13710.t1 g13710 MNAVAHCAAEGPVHLMWNRVARGQSTAHPQPIKIAWSDGCDGGTSAYALDAAAVGQDGRACKQEQPASNATVGKHAIPPPTSKAAGGNGAKSVGLAENDKALRVGADTVNESDPLHPSMAVRHGSFGGVAPPMRVHSFSLPPRKVIVKRIVLAVCHFDSHGKGFSVYEQIRHVFDHAEIHVKVVDAHHESDLLAVARETSFDKYDALCVVGGDHSIHEAINGMMRRDDGRTIPIGM # PASA_UPDATE: g13711.t1, single gene model update, valid-1, status:[pasa:asmbl_5948,status:12], valid-1 NODE_3372_length_3603_cov_40.5669 . gene 2637 3518 . + . ID=g13711;Name=g13711.t1 NODE_3372_length_3603_cov_40.5669 . mRNA 2637 3518 . + . ID=g13711.t1;Parent=g13711;Name=g13711.t1 NODE_3372_length_3603_cov_40.5669 . five_prime_UTR 2637 2697 . + . ID=g13711.t1.utr5p1;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . exon 2637 2761 . + . ID=g13711.t1.exon1;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . CDS 2698 2761 . + 0 ID=cds.g13711.t1;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . exon 2915 3049 . + . ID=g13711.t1.exon2;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . CDS 2915 3049 . + 2 ID=cds.g13711.t1;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . exon 3332 3518 . + . ID=g13711.t1.exon3;Parent=g13711.t1 NODE_3372_length_3603_cov_40.5669 . CDS 3332 3518 . + 2 ID=cds.g13711.t1;Parent=g13711.t1;3_prime_partial=true #PROT g13711.t1 g13711 MKHHAAAVVGLIIAATSVVALGPYNIDKSQTSVSGLSAGGFFAVQFHIAYSSSIMGAGVFAGGPYFCAQGSVITAQTTCMSVPLMLSVAPLVSKVKGLANADIDDPSNLRRTRVFTYSGSKDTVVNPG # ORIGINAL: g1223.t1 original gene structure, not modified by PASA NODE_654_length_19521_cov_49.4394 AUGUSTUS gene 9605 11632 . - . ID=g1223;Name=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS mRNA 9605 11632 . - . ID=g1223.t1;Parent=g1223;Name=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 11449 11632 . - . ID=g1223.t1.exon1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 11449 11632 . - 0 ID=cds.g1223.t1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 11217 11324 . - . ID=g1223.t1.exon2;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 11217 11324 . - 2 ID=cds.g1223.t1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 10777 10980 . - . ID=g1223.t1.exon3;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 10777 10980 . - 2 ID=cds.g1223.t1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 10118 10527 . - . ID=g1223.t1.exon4;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 10118 10527 . - 2 ID=cds.g1223.t1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 9855 9923 . - . ID=g1223.t1.exon5;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 9855 9923 . - 0 ID=cds.g1223.t1;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 9605 9655 . - . ID=g1223.t1.exon6;Parent=g1223.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 9605 9655 . - 0 ID=cds.g1223.t1;Parent=g1223.t1 #PROT g1223.t1 g1223 MDTKQSAWDGDESAADPTFPDIATFQLPDNVTAFYRDAYPFVFETIEPKSREKYRFTTYFLDAIGAGPIEDVVVLIHGFPTCSYDWRALWPSMLDRFGRVIAVDMLGFGISDKPNHYNYTVPEWADLHLAVLKHLNIKQAHVMSHDLGDTVAQELLGRQRVRLMAGTSSESDFRIRSMCFLNGGLFHDAHFPILAQRLLAMPIIGRICAYFATETAFKTNITKVFGDKHPPPEDYLHDQWALAMFKDGYLAFPDVFAFSEETRARTPWFNWTLQGEVAPMRLVYGPADPISGRSVAEKYGQMVPGADVVELSAGVGHFCQIEDPQGVWAAYTDFLKAHPDA* # PASA_UPDATE: g1225.t1, single gene model update, valid-1, status:[pasa:asmbl_8712,status:12], valid-1 NODE_654_length_19521_cov_49.4394 . gene 16201 17178 . + . ID=g1225;Name=g1225.t1 NODE_654_length_19521_cov_49.4394 . mRNA 16201 17178 . + . ID=g1225.t1;Parent=g1225;Name=g1225.t1 NODE_654_length_19521_cov_49.4394 . exon 16201 17178 . + . ID=g1225.t1.exon1;Parent=g1225.t1 NODE_654_length_19521_cov_49.4394 . CDS 16201 17115 . + 0 ID=cds.g1225.t1;Parent=g1225.t1 NODE_654_length_19521_cov_49.4394 . three_prime_UTR 17116 17178 . + . ID=g1225.t1.utr3p1;Parent=g1225.t1 #PROT g1225.t1 g1225 MGEVQPGSPSVVAVPRGHWHLRLPKTRFEWSVASAVMLIMVWSAVVHLKSTAGGDSQSAAAEAPALAGEHASADDDNTEYFASPTSLSQCPALVAARAEVGWSEDAHSWPKPFSIPCAKPPRAYSLTGWDSMGAAALNAQGPAGNDIQVDSTLPFNSIRGWPMWVWVPALTADGPPFRHAVAASDGHLIQTTVSLGDIFSAFFDQTNTGINSPGATRAANPVRVFEWAMREGVPFGVHCGGVYAVDERVATALFQCAHIPRPHADMLVTALNVYVALVKPDPAPSSSPTASPTPKPTQTRGTRD* # ORIGINAL: g1221.t1 original gene structure, not modified by PASA NODE_654_length_19521_cov_49.4394 AUGUSTUS gene 163 5362 . + . ID=g1221;Name=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS mRNA 163 5362 . + . ID=g1221.t1;Parent=g1221;Name=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 163 319 . + . ID=g1221.t1.exon1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 163 319 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 449 613 . + . ID=g1221.t1.exon2;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 449 613 . + 2 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 875 984 . + . ID=g1221.t1.exon3;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 875 984 . + 2 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 1304 1372 . + . ID=g1221.t1.exon4;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 1304 1372 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 1560 1982 . + . ID=g1221.t1.exon5;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 1560 1982 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 2204 2641 . + . ID=g1221.t1.exon6;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 2204 2641 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 3007 3130 . + . ID=g1221.t1.exon7;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 3007 3130 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 3386 3474 . + . ID=g1221.t1.exon8;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 3386 3474 . + 2 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 3699 3835 . + . ID=g1221.t1.exon9;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 3699 3835 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 4227 4305 . + . ID=g1221.t1.exon10;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 4227 4305 . + 1 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 4563 4724 . + . ID=g1221.t1.exon11;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 4563 4724 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 5021 5362 . + . ID=g1221.t1.exon12;Parent=g1221.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 5021 5362 . + 0 ID=cds.g1221.t1;Parent=g1221.t1 #PROT g1221.t1 g1221 MVGAQTVSWADGFILIYNVREQPSFDVMGSYFAKIMHYKDGEKVPVVLVGCGAADLETGPEIASAGQAFQRQVQFTDGKRLSHDLNQCAFREVNAETGRNIGIVFRDIALQVVESGSRYGGAPNLDVKALFSRKSSVSKSLEKKQKKEARTNMAVQEGIGRPIPRKQGYLFKQAGESGKWRKKYVILTTGRLVYYPSLQDYMNDEDGKEINMMHVTVKVPGIRLHITPGVGGATGQPAPSLASPASSPSVVAGTPTMSNSASLGSVPGGFARKVHLTTPSDNSEEDSGPMQLSPGPKESHQPLTQLPGGGIASPYIARKGHKRTKSDGVKVEGESDTSFFDLVRMKAGGKDKDKDSRDKDKEKRKEEKREKERERKEEKEREKEREKEREKEREKEKEDEKEKEKDAFFFNILSLEGKTWQFQTSSQEENDSWVHAIEQLIMDSLTSNLIDKPRRSDYDSSPVAFPPIRGTELKTIMSSIRSTAGNAQCADCGTADPEWASINLGMLMCIECSGIHRNLGVHISKVRSVTLDDWPPEVLEVLRFVGNANVNAVYEANVPKDAKKPTPDSPRAERELWIRAKYVARQFLPAKPADLQQFVFEAIQSGDSQAILLAVALAERADINATNESGDTPMRVAARTGNAAAAQLLVWANAEVSQVDADATPATDSGRLCAHVITSVLEAISRRLGAEQPKSPALSRNSSNSQLVVGTSSASPMTKQPSYTGPSIVVEPSTPTKIAPVAGSGEFFAKKDASPLVFRKETVM* # ORIGINAL: g1226.t1 original gene structure, not modified by PASA NODE_654_length_19521_cov_49.4394 AUGUSTUS gene 17629 19246 . - . ID=g1226;Name=g1226.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS mRNA 17629 19246 . - . ID=g1226.t1;Parent=g1226;Name=g1226.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 18212 19246 . - . ID=g1226.t1.exon1;Parent=g1226.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 18212 19246 . - 0 ID=cds.g1226.t1;Parent=g1226.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS exon 17629 18042 . - . ID=g1226.t1.exon2;Parent=g1226.t1 NODE_654_length_19521_cov_49.4394 AUGUSTUS CDS 17629 18042 . - 0 ID=cds.g1226.t1;Parent=g1226.t1 #PROT g1226.t1 g1226 MHHSTFDGDFDDAAVAFDAPLVNAPIPRWQRKAMESSMQTPSKKAVTPRRAAGTPSADRFIPSRSAMNLEVSHFNLAGSSCKENDDYNNIMSAVSSPSKAELQKNLSDNLLGGNGDAKILALKKKAPAPRDHDNHLKVLYSQNKSASGIYQKSTRNIPQQADRILDAPEMRDDYYLNLLDWGSNNIIAVALGRSVYLWNATTGGIEHLMQMESESSYVSSVSWVKEGGYLAVGTSESDVQLWDTDRMTQIRCMKGHAARVGALAWNNHVLSSGSKSGAIFQHDVRIAQHHFATLDGHTQEVCGLKWSPDGSQLASGGNDNVVNVWDEGACERPKHRLDLHQAAVKALAWCPWQANLLASGGGTADRHIRFWNTATGACVNSIDTNSQVCALQWSKEHREIVSSHGFAQNQLTVWKYPTLARIGEMTGHTSRVLQMALSPDGTTVATAAGDETIRLWKCFASEAKVAKAKAQPQSALMRGMIR* # PASA_UPDATE: g1224.t1, single gene model update, valid-1, status:[pasa:asmbl_8711,status:12], valid-1 NODE_654_length_19521_cov_49.4394 . gene 12455 14852 . + . ID=g1224;Name=g1224.t1 NODE_654_length_19521_cov_49.4394 . mRNA 12455 14852 . + . ID=g1224.t1;Parent=g1224;Name=g1224.t1 NODE_654_length_19521_cov_49.4394 . exon 12455 13153 . + . ID=g1224.t1.exon1;Parent=g1224.t1 NODE_654_length_19521_cov_49.4394 . CDS 12455 13153 . + 0 ID=cds.g1224.t1;Parent=g1224.t1 NODE_654_length_19521_cov_49.4394 . exon 13505 14852 . + . ID=g1224.t1.exon2;Parent=g1224.t1 NODE_654_length_19521_cov_49.4394 . CDS 13505 14806 . + 0 ID=cds.g1224.t1;Parent=g1224.t1 NODE_654_length_19521_cov_49.4394 . three_prime_UTR 14807 14852 . + . ID=g1224.t1.utr3p1;Parent=g1224.t1 #PROT g1224.t1 g1224 MAGVIATTVANLSVRQKQLLIFSLAIVCAGLFVLDQRIFSAASSGGGSQSDGSSISQGSSGVGNGDGAWTGSSDETLRDVPVDDQLEGGDDAPQEQEGEEEDTGDETLDEAEDDETIDEEAGVTDESNGDGGTSDQTDDETTVNEEVDVAEEEQPSSSDGDTGDETTSGADNDAPVGVDDGKAKEGTAQPSVESKGDAAIGPISASTSAAAVAVPPPATPTSASPPKATTPTIAPQKTNVIANANGAGNTAATPARFKYVTIGKKRMWVVGWNAREFPAGALFLSPPPVLRWNENAVTRFTNRWEEVQAIKASDGHPGGRCNPELLRLIRAFPWGLMSSVRDIGTNLIESVMAGMPSRIWPEALQHSMRPFCTANGPDGDTSAGCFWTERFTQCTVDQGAPAIGLAFHQYITHAAPPYWDDMVAKGDVWWETADGKRIEQLDPPAFSNGREGAVEWSVYSMLRSMLFKTVWLANYDVRESIKKLEAGLALKKPMLVLQIRRTDKAIDHGIVDFRHRFPGGYVPFSAYGDMIKALEGNVGVAFKSVLLLTDDLASWRQRDEWMAGFSDRSVVPLINPYWLKYEALFSSPEWLSTGHVNLDRMADPSVTTFHRELVADMMYASAHADYIVGCGSSGVSQYVAQGMGYRLGVDGTWVSLFEEDYFQAGV* # PASA_UPDATE: g1222.t1, single gene model update, valid-1, status:[pasa:asmbl_8713,status:3], valid-1 NODE_654_length_19521_cov_49.4394 . gene 6074 9064 . + . ID=g1222;Name=g1222.t1 NODE_654_length_19521_cov_49.4394 . mRNA 6074 9064 . + . ID=g1222.t1;Parent=g1222;Name=g1222.t1 NODE_654_length_19521_cov_49.4394 . five_prime_UTR 6074 6305 . + . ID=g1222.t1.utr5p1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 6074 6438 . + . ID=g1222.t1.exon1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 6306 6438 . + 0 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 6650 6757 . + . ID=g1222.t1.exon2;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 6650 6757 . + 2 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 7057 7251 . + . ID=g1222.t1.exon3;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 7057 7251 . + 2 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 7697 8166 . + . ID=g1222.t1.exon4;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 7697 8166 . + 2 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 8396 8464 . + . ID=g1222.t1.exon5;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 8396 8464 . + 0 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . exon 8922 9064 . + . ID=g1222.t1.exon6;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . CDS 8922 8993 . + 0 ID=cds.g1222.t1;Parent=g1222.t1 NODE_654_length_19521_cov_49.4394 . three_prime_UTR 8994 9064 . + . ID=g1222.t1.utr3p1;Parent=g1222.t1 #PROT g1222.t1 g1222 MRPDVSHLSERVCAFYESDDVSSLEVTVQDEYLGSRRTLNVVYRASTGQGPPDSTLLCIHGFPTCMFDWHLIWDRLLSLFGRVIAVDLLGFGLSDKPSRFGYTFKSQADVCESVLETLGVTNVHLLAHDYGVTVAQELLARKGIMGRTLSLSLPSDRPETQDQSFADATPIKLNIQSVVFLNGGLFPESHQPRLIQKLLLVPILGRVLASLTTRGTFARSFRAVFGPNTQPTDAEMDEYWGLVNINGGSYAVPDTIVYMTERRMYRERYVGALMESKVPMRLVNGPADPVSGAHLAARYREQVPNADVIMLGDDIGHYPQVEDPDGVWSAFAEFHTQQRAKSTVPIGQ* # ORIGINAL: g7588.t1 original gene structure, not modified by PASA NODE_643_length_19714_cov_47.0221 AUGUSTUS gene 66 1715 . - . ID=g7588;Name=g7588.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS mRNA 66 1715 . - . ID=g7588.t1;Parent=g7588;Name=g7588.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 66 1715 . - . ID=g7588.t1.exon1;Parent=g7588.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 66 1715 . - 0 ID=cds.g7588.t1;Parent=g7588.t1 #PROT g7588.t1 g7588 MSDHEYDDEERDSDATDENATSRREWPLPDAGQDEQTAGGDRGDANDIKVKEGADKTIASEAQGKTMAALAAVMDLDALDRCFRGDAVATRGAVERLKGLQCYARRTFVFNLDRHSFTPTTGTAYDLASYVVTVTVRTRINGGMQGELMSGLLLMGILACTENCPPFAQGAGVTGIHVYAYSRDRCNGTYEFEFGGLLPGLISEDQKWSITVRVDFANFEHFISPGTACSRVLRLPLPQQPLAIADSDGRFGCGPIRRARYMLWEGSLVAAAIRDRTESTVRATNGGTEHAVQDAGIPPSRSESAVDNGAFNASLLAEDVGLSQSTEQTSTGAFQRTTPQQQSHAAISIDRMPTCSGNFAAEAGQWIVRPRGGVLDTSLCRETSPTHNEADTGSATPRHMWVMDDYVWCPSTCRLRLYTPDDLHRCFDRRGIKRVLYAGDSRTRGLYGNLKFRMSRVPPPSYRCGLSQPSCYTFDAGNTTFDLVYTWGFFPQRYPPDIPPICQHELLNHTRYFEMRGLLPVGGGVDSLRRRLENATYDVVLLNEGLHAMQ # ORIGINAL: g7589.t1 original gene structure, not modified by PASA NODE_643_length_19714_cov_47.0221 AUGUSTUS gene 5416 8169 . + . ID=g7589;Name=g7589.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS mRNA 5416 8169 . + . ID=g7589.t1;Parent=g7589;Name=g7589.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 5416 8169 . + . ID=g7589.t1.exon1;Parent=g7589.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 5416 8169 . + 0 ID=cds.g7589.t1;Parent=g7589.t1 #PROT g7589.t1 g7589 MISGRRILPNERVELFAKGAKGKKPDDKTPTPASASQQIASAAAVQALTEKKKVGRPKKSTLAESRGATVPPIKPANVAAARPLALAQAQGLRPKVSPSLVPRAGAVAGVTSAMSPNALSPGLSLSASGGSPFAFGADSSVSSGFSGAKEDGGAPVPPAAALPAKKPATTGRIGGFTSAILASKAEKETKKGSLGPDHVVAWRERKEKGLLGTTPKTVDDGLSGLASMDAAVANGASADTKGPEKPMSAEDVRRDLERQKLIAQRAQGRSKSADVNVIVDAINSIKKEDVPDLATEPATTTDELLDASARTDAHGTEVTLSSGNGGAESAGESVGGSAEAASAVTSDSVEGGLNVGVASGNTTEPTDSSAISAAMDAKPSRKRKRVTWAPEMELKRIKYFDVEVDMEMDDAGMSVNVGGGGEDGSFGHGMSPDDFTRWQATGGFAEQPLHDDRRWMDERESAAGPQFLQQHQQPPPPQQQQQQQQQQQQHSVAPISQVHLLDFLKRQLPREAPQDRVQPTVAWQPIRVLDIPGEIEVVEVVSDEAVVESARVAKTRSESGSEISEPTDGSLTSKSKAAGTDSLSTVPSTIPLHSEDDSVSAVSATSSGVSDGSVQQQQQQQQQQQQSQQQQLLLLHQLQQQLAAAAGPAVHSLPYSATPQGVVDVRALLSALDTRDGSTALPQMLLGALQAGPLYNSQPPAQTPLQLQPHPMYQNYPPPPPMAGVAPPQQPQYALPPMNPGGNGPLHPYNSGFLGPPGLHPYQGVPPPNADAGYPPPIHASGPYAPRLAPLPQGQLNGQSRMPEAEDDYAPAPTRFAFAAAHEMEHDRRHYHHHDGPMGPPPPPGMVGEHGPPPPHNRGERENRRRDEFHRDNSGWDGPRDNGGRDGGFGRKREPCKYFFKPRGCMKGDSCHFSHTR* # ORIGINAL: g7592.t1 original gene structure, not modified by PASA NODE_643_length_19714_cov_47.0221 AUGUSTUS gene 18262 19477 . + . ID=g7592;Name=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS mRNA 18262 19477 . + . ID=g7592.t1;Parent=g7592;Name=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 18262 18310 . + . ID=g7592.t1.exon1;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 18262 18310 . + 0 ID=cds.g7592.t1;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 18694 18795 . + . ID=g7592.t1.exon2;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 18694 18795 . + 2 ID=cds.g7592.t1;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 18926 19071 . + . ID=g7592.t1.exon3;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 18926 19071 . + 2 ID=cds.g7592.t1;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 19376 19477 . + . ID=g7592.t1.exon4;Parent=g7592.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 19376 19477 . + 0 ID=cds.g7592.t1;Parent=g7592.t1 #PROT g7592.t1 g7592 MPQMDPEAITVESPLLVHELPPGDTSFKLRATYADVSDFIIKPIRQVMYSTTLRTKMHKMWYHMPYYVPILSWLPKYTKGLFVQDLLAGVTVAVMMVPQGLSYAQLADLPPVFGLYTAFLPVIIYALLGMSR* # PASA_UPDATE: g7591.t1, single gene model update, valid-1, status:[pasa:asmbl_8654,status:12], valid-1 NODE_643_length_19714_cov_47.0221 . gene 14253 17391 . - . ID=g7591;Name=g7591.t1 NODE_643_length_19714_cov_47.0221 . mRNA 14253 17391 . - . ID=g7591.t1;Parent=g7591;Name=g7591.t1 NODE_643_length_19714_cov_47.0221 . five_prime_UTR 17237 17391 . - . ID=g7591.t1.utr5p1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 17143 17391 . - . ID=g7591.t1.exon1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 17143 17236 . - 0 ID=cds.g7591.t1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 16347 16636 . - . ID=g7591.t1.exon2;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 16347 16636 . - 2 ID=cds.g7591.t1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 15864 16032 . - . ID=g7591.t1.exon3;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 15864 16032 . - 0 ID=cds.g7591.t1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 15633 15659 . - . ID=g7591.t1.exon4;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 15633 15659 . - 2 ID=cds.g7591.t1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 15320 15433 . - . ID=g7591.t1.exon5;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 15320 15433 . - 2 ID=cds.g7591.t1;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . exon 14253 14950 . - . ID=g7591.t1.exon6;Parent=g7591.t1 NODE_643_length_19714_cov_47.0221 . CDS 14253 14950 . - 2 ID=cds.g7591.t1;Parent=g7591.t1 #PROT g7591.t1 g7591 MRLHFTPALLMHLFVVLALSTVPQEVSSLGGDDNKVAFAFGGRVTMQCLIQGDLSAGGVKSTNGKNRSFTCRNIVDPNGAANFLECDGRYSHKEDPSNTNPLTFVYDFGTTIDSVQYIVAIVSSEGVEIGVSATDNSIDHKVVEVEGAVEGKDAPSGAMVSATLTVGDGIICRAKVQAAYKQKKAIDCAYEKWECGNGTKTRTRTIATQPAFGGKECTEDLTETVNCNEQPCGGCPNGPFAPNTELGPGSIAFTGFNSDGNDDLTFVVIDTIPVGTEIFFEDNEWSGSAFNSGEGEFKVTVSDKALTAGTVVTIKSISTGAFATVEKTAGSDGTVTVALGPTHANAGLASADEVVYAYIKKDANFVFLAAVANGGFSSTNGPLTNTGLVAGVTAIDLSVLDDDCDIAAYNYPRFSNDVRANVLTRINTPANWIAQDSTGDQSVDGTAPDTPFAITKFDFCDSA* # ORIGINAL: g7590.t1 original gene structure, not modified by PASA NODE_643_length_19714_cov_47.0221 AUGUSTUS gene 8975 11687 . - . ID=g7590;Name=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS mRNA 8975 11687 . - . ID=g7590.t1;Parent=g7590;Name=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 11582 11687 . - . ID=g7590.t1.exon1;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 11582 11687 . - 0 ID=cds.g7590.t1;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 10902 11191 . - . ID=g7590.t1.exon2;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 10902 11191 . - 2 ID=cds.g7590.t1;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 10431 10599 . - . ID=g7590.t1.exon3;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 10431 10599 . - 0 ID=cds.g7590.t1;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 10039 10203 . - . ID=g7590.t1.exon4;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 10039 10203 . - 2 ID=cds.g7590.t1;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS exon 8975 9672 . - . ID=g7590.t1.exon5;Parent=g7590.t1 NODE_643_length_19714_cov_47.0221 AUGUSTUS CDS 8975 9672 . - 2 ID=cds.g7590.t1;Parent=g7590.t1 #PROT g7590.t1 g7590 MRSKFGATRLLLMQWALIMCLAALIITPQGASAMPNDNKVAFAFGGGINMQCLIQGDLSLGGVKSKNSKDRSFTCTNTVDNNGQANFLDCYIWFSHKEDPSNTDPLTFVYNFGTNIDSVNHIVAIVSSEGVQIGVSASDSSIDYKVVEIEGAVEGKDAPTGVSVPGTLTVGDGIICRAKIQAAYKQKKAIDCAYEKWGDFGTCTKECGTGTKTRTRTIATQPAFGGKECTEDLTEAVNCNEQPCGGCPNGPFAPNTELGPGSIAFTGFNSDGNDDLTFVVIDTIPVGTEIFFEDNEWSGSAFNSGEGEFKVTVSDKALTAGTVVTIKSISTGAFATVEKTAGSDGTVTVALGPTHANAGLASADEVVYAYIKKDANFVFLAAVANGGFSSTNGPLTNTGLVAGVTAIDLSVLDDDCDIAAYNSVRNSAVSRADVLTRINTPANWIAQDATGDQSVDGTAPDTPFAVTKFDFCVSA* # ORIGINAL: g2248.t1 original gene structure, not modified by PASA NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS gene 314 475 . - . ID=g2248;Name=g2248.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS mRNA 314 475 . - . ID=g2248.t1;Parent=g2248;Name=g2248.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS exon 314 475 . - . ID=g2248.t1.exon1;Parent=g2248.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS CDS 314 475 . - 0 ID=cds.g2248.t1;Parent=g2248.t1 #PROT g2248.t1 g2248 MKPYAESKALKGRNFASLVMWAVATVVLGSWPCVTASTLHDWLGGLRLPFRTHM # ORIGINAL: g2249.t1 original gene structure, not modified by PASA NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS gene 582 1118 . - . ID=g2249;Name=g2249.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS mRNA 582 1118 . - . ID=g2249.t1;Parent=g2249;Name=g2249.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS exon 798 1118 . - . ID=g2249.t1.exon1;Parent=g2249.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS CDS 798 1118 . - 0 ID=cds.g2249.t1;Parent=g2249.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS exon 582 632 . - . ID=g2249.t1.exon2;Parent=g2249.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS CDS 582 632 . - 0 ID=cds.g2249.t1;Parent=g2249.t1 #PROT g2249.t1 g2249 MRKWRTARYAKGKYVLFMDDDDYAKPHQLETYVMSPSAPAANFFTSSSCVRLAEYRYVPLGPARHVGVMENCFGDSNIFVRLSFFAEFNGFTEDYGVGFEDYEFLAKVTVTHSKLEVISEPLH* # ORIGINAL: g2250.t1 original gene structure, not modified by PASA NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS gene 1387 1821 . - . ID=g2250;Name=g2250.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS mRNA 1387 1821 . - . ID=g2250.t1;Parent=g2250;Name=g2250.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS exon 1387 1821 . - . ID=g2250.t1.exon1;Parent=g2250.t1 NODE_3262_length_3889_cov_37.2486_potentialcontaminant AUGUSTUS CDS 1387 1821 . - 0 ID=cds.g2250.t1;Parent=g2250.t1 #PROT g2250.t1 g2250 MGSKGPTQTLPVFKVRAARERACVDNTEALTQRAPPLPQLASSVASARALRRWGEFIGERIVQRAASIAREQPRVSLTEGPLVSVVITHYNRHVFLEQAIESIERQTYLRFELLIIDDINKQGVAHVLGSVGREVEVEEVACVF* # PASA_UPDATE: g9687.t1, single gene model update, valid-1, status:[pasa:asmbl_10219,status:12], valid-1 NODE_980_length_15102_cov_37.8488 . gene 12422 13649 . + . ID=g9687;Name=g9687.t1 NODE_980_length_15102_cov_37.8488 . mRNA 12422 13649 . + . ID=g9687.t1;Parent=g9687;Name=g9687.t1 NODE_980_length_15102_cov_37.8488 . exon 12422 13649 . + . ID=g9687.t1.exon1;Parent=g9687.t1 NODE_980_length_15102_cov_37.8488 . CDS 12422 13456 . + 0 ID=cds.g9687.t1;Parent=g9687.t1 NODE_980_length_15102_cov_37.8488 . three_prime_UTR 13457 13649 . + . ID=g9687.t1.utr3p1;Parent=g9687.t1 #PROT g9687.t1 g9687 MARQPVRAILFDKDGTLIHFKASWFPILRRAASTVSHGDDAIAAELLAAGGYDAATDGFVSGSVLVSGSSDDIARVWFERLVVLGAGERCGPLDVITRELDDIFNEMGPSAAVPVVELGAYFSHLKSLGLKVGIATMDTEESVRLLMHRFNIDPSSIDFFCGYDSGHGSKPGKGMLCAFSKHIGVEPSSIAMVGDSTHDMLMGRNAAAGLNIAVLTGTASSDDLSPYADCVLNSIADIEDYLVSKGLFVVPETPSTSSSSAAAMASLLSCGVTSSTGSRTVDALRKVSIATSSSLPVIEKASLLCDDGNIARGTVALERSASMSSPYFPASRRSSNSVGVKAAA* # PASA_UPDATE: g9684.t1, single gene model update, valid-1, status:[pasa:asmbl_10215,status:12], valid-1 NODE_980_length_15102_cov_37.8488 . gene 1728 4300 . - . ID=g9684;Name=g9684.t1 NODE_980_length_15102_cov_37.8488 . mRNA 1728 4300 . - . ID=g9684.t1;Parent=g9684;Name=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 4262 4300 . - . ID=g9684.t1.exon1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 4262 4300 . - 0 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 3803 3933 . - . ID=g9684.t1.exon2;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 3803 3933 . - 0 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 3324 3442 . - . ID=g9684.t1.exon3;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 3324 3442 . - 1 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 2828 3171 . - . ID=g9684.t1.exon4;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 2828 3171 . - 2 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 2549 2626 . - . ID=g9684.t1.exon5;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 2549 2626 . - 0 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 2186 2260 . - . ID=g9684.t1.exon6;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 2186 2260 . - 0 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . exon 1728 1945 . - . ID=g9684.t1.exon7;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . CDS 1772 1945 . - 0 ID=cds.g9684.t1;Parent=g9684.t1 NODE_980_length_15102_cov_37.8488 . three_prime_UTR 1728 1771 . - . ID=g9684.t1.utr3p1;Parent=g9684.t1 #PROT g9684.t1 g9684 MWRCIYLHLSYLQTDILKKTSTVNDEFENGARDIARGISKLYAFLLDGRRDYIEAPGGVSGSRAEMTESERDEIDMEAATFVRSFQENIGLLRKVFVDGAKKPTSTQLASHRLHVTGTLEAFLRGAATLHAEQRELRLKNAADRRRYARLDGADAVDMLAARKKEASAKAVGGVKDRASADKNAVAHVTGGAGKGVANVVEEDDADDVMNELSSSERQQLELENSRLYDEMEVMMTQVREAESKMMEISRLHQIFTHNVVSQAESIERVHDTVVASTENVRLGNEELSKAMRNSVDFRVWVLLFLVTCSFALLFLDWYS* # PASA_UPDATE: g9685.t1, single gene model update, valid-1, status:[pasa:asmbl_10217,status:3], valid-1 NODE_980_length_15102_cov_37.8488 . gene 4501 9448 . + . ID=g9685;Name=g9685.t1 NODE_980_length_15102_cov_37.8488 . mRNA 4501 9448 . + . ID=g9685.t1;Parent=g9685;Name=g9685.t1 NODE_980_length_15102_cov_37.8488 . five_prime_UTR 4501 4694 . + . ID=g9685.t1.utr5p1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 4501 4769 . + . ID=g9685.t1.exon1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 4695 4769 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 5036 5222 . + . ID=g9685.t1.exon2;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 5036 5222 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 5385 5617 . + . ID=g9685.t1.exon3;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 5385 5617 . + 2 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 5820 5902 . + . ID=g9685.t1.exon4;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 5820 5902 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 6145 6413 . + . ID=g9685.t1.exon5;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 6145 6413 . + 1 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 6800 7074 . + . ID=g9685.t1.exon6;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 6800 7074 . + 2 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 7206 7664 . + . ID=g9685.t1.exon7;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 7206 7664 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 8019 8668 . + . ID=g9685.t1.exon8;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 8019 8668 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 8937 9024 . + . ID=g9685.t1.exon9;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 8937 9024 . + 1 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . exon 9216 9448 . + . ID=g9685.t1.exon10;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . CDS 9216 9317 . + 0 ID=cds.g9685.t1;Parent=g9685.t1 NODE_980_length_15102_cov_37.8488 . three_prime_UTR 9318 9448 . + . ID=g9685.t1.utr3p1;Parent=g9685.t1 #PROT g9685.t1 g9685 MAGKAAGGLVPAGFVAHLPQPDLTKETFCEWNCDLYSYDPASESPPRPPGALSVPQCPPIVIPPVRPYDGQQAILVAARDKTPGLSDILLTAYQRGIRHAVRQLYLSRAHAQNERGRDRDNRPDGADEGETLPAQKSSEKGFASSAFSAAVEFLDVVGSILPWLKSTPITSVALFSVAPSWSISPVRACGWHRHLPRLAVAMPDNSIRLYDFTVHRFVHSPLRHASQRDVTCIEWRPLAGATFAAGGAEGIVLWKVSGWTSSRLTANGSAVGAVTSSTLTLRGHAPVVAMAWSPDGRYLASGSPNDSRVVIWDVTTQQRTVLRRGGDGGITCLAWSPCGTRVFAASDSGAFRVWETQNWTCDRWAPTPGAGRCKTAAWSPNGRVILFAFERSPRVYALTFDLPAPATDGRTVIAIDCAPTHVTATVNTNRHASPEPGDDAGSASSGPSADVTSGAALPKSPRSPGRPSRATEGFTPSVRAASEGDRRRKYREELNAYMRARGGLPVPESRVDAYRQVYDPLFYLYLKAYGIEDLMERREREMYPFLDDPLTNATALTADQRRQLERILDNAVVVKGRRAPNPLTSDIISAGGNDDDNDADGSIRGVSPVGSNSASRLTSARGSVAPVTSPQQPPRTSPQHPPWMSPPQVGGGGGGLVTSTPITGARMGGDSVAMGTPFAAESHRPIVRGVEEITLGGNVRSIAWDASGERLVVLCGDAEEGSVAGDVALLFRTGTQPYLEIVPSGVIRGPCDAGAPQFALFVPGSLQGALLSMFHLGGRVSFVPMVFVPTAGVLSGQLNAAVRGTW* # PASA_UPDATE: g9683.t1, single gene model update, valid-1, status:[pasa:asmbl_10216,status:12], valid-1 NODE_980_length_15102_cov_37.8488 . gene 207 1403 . + . ID=g9683;Name=g9683.t1 NODE_980_length_15102_cov_37.8488 . mRNA 207 1403 . + . ID=g9683.t1;Parent=g9683;Name=g9683.t1 NODE_980_length_15102_cov_37.8488 . exon 207 311 . + . ID=g9683.t1.exon1;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . CDS 207 311 . + 0 ID=cds.g9683.t1;Parent=g9683.t1;5_prime_partial=true NODE_980_length_15102_cov_37.8488 . exon 494 646 . + . ID=g9683.t1.exon2;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . CDS 494 646 . + 0 ID=cds.g9683.t1;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . exon 891 961 . + . ID=g9683.t1.exon3;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . CDS 891 961 . + 0 ID=cds.g9683.t1;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . exon 1107 1403 . + . ID=g9683.t1.exon4;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . CDS 1107 1206 . + 1 ID=cds.g9683.t1;Parent=g9683.t1 NODE_980_length_15102_cov_37.8488 . three_prime_UTR 1207 1403 . + . ID=g9683.t1.utr3p1;Parent=g9683.t1 #PROT g9683.t1 g9683 LLSYNRANRAVAILCNHQRAAPKKFDEQMTRLDEKIAVVEKELKAAEKEKKAAKKEKDAKKSEKAKKKVERLKDRIHRLEIQKTDKGENKTIALGTSKLNYLDPRISIAWCKKYDVPVEKVYNKTQREKFAWAMGTPPNWTF* # ORIGINAL: g9686.t1 original gene structure, not modified by PASA NODE_980_length_15102_cov_37.8488 AUGUSTUS gene 10005 11125 . - . ID=g9686;Name=g9686.t1 NODE_980_length_15102_cov_37.8488 AUGUSTUS mRNA 10005 11125 . - . ID=g9686.t1;Parent=g9686;Name=g9686.t1 NODE_980_length_15102_cov_37.8488 AUGUSTUS exon 10920 11125 . - . ID=g9686.t1.exon1;Parent=g9686.t1 NODE_980_length_15102_cov_37.8488 AUGUSTUS CDS 10920 11125 . - 0 ID=cds.g9686.t1;Parent=g9686.t1 NODE_980_length_15102_cov_37.8488 AUGUSTUS exon 10005 10830 . - . ID=g9686.t1.exon2;Parent=g9686.t1 NODE_980_length_15102_cov_37.8488 AUGUSTUS CDS 10005 10830 . - 1 ID=cds.g9686.t1;Parent=g9686.t1 #PROT g9686.t1 g9686 MRVGWSSAYRASDSKAGRRLLRRTFATPLSAQKNRVLNGLAIVECPLSDMHLSVEMSRRMGMPTAQNPPRAESQRRHFLCAITVVCNEADRIAPWIVYHRTIGVDHFVLFDNASSDTLSEESAKFGADVEILRWPFHKAQTTAFLYGKNLARERCEWLALIDVDEFIFPVRNVLAAAALNEADESSSTRRSLAAYLRSKHDVSVNDSQSGTVIGAIYLRSRLMGSGHRLWRSSSPAPLVYMEHSPSPWELNPKSIVRTDAADNDIAVYIHKTQYGTKWASEWANEMCVHIMHYKIQSWEDYMEKYRNGRANMRDWPMPKTPLCPDIPSKQRVRLSKRHRRHIY* # ORIGINAL: g9886.t1 original gene structure, not modified by PASA NODE_1410_length_11493_cov_42.8311 AUGUSTUS gene 4267 5053 . - . ID=g9886;Name=g9886.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS mRNA 4267 5053 . - . ID=g9886.t1;Parent=g9886;Name=g9886.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 4800 5053 . - . ID=g9886.t1.exon1;Parent=g9886.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 4800 5053 . - 0 ID=cds.g9886.t1;Parent=g9886.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 4267 4687 . - . ID=g9886.t1.exon2;Parent=g9886.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 4267 4687 . - 1 ID=cds.g9886.t1;Parent=g9886.t1 #PROT g9886.t1 g9886 MRAIARSAWPLSPPSINLAKNFDSVLDVGHLALLEATLASRPRLDLTHLSRKAAVLVPFCHVGGTPSLLFTLRSKKLSKHSGEVSFPGGMMDDDDGTVNNCALREADEELSLDRKRVRILGQYHDLPDKSGTIAVTPVVAYIGHIDVQSLKTNPSEVEEVFAVAIADLCDPNKIVYAPLRAIKNVPTFHAAPHPIWGMTALILQGLFTQVLPVVMETASPSPVE* # PASA_UPDATE: g9884.t1, single gene model update, valid-1, status:[pasa:asmbl_1508,status:12], valid-1 NODE_1410_length_11493_cov_42.8311 . gene 409 1738 . - . ID=g9884;Name=g9884.t1 NODE_1410_length_11493_cov_42.8311 . mRNA 409 1738 . - . ID=g9884.t1;Parent=g9884;Name=g9884.t1 NODE_1410_length_11493_cov_42.8311 . five_prime_UTR 1667 1738 . - . ID=g9884.t1.utr5p1;Parent=g9884.t1 NODE_1410_length_11493_cov_42.8311 . exon 409 1738 . - . ID=g9884.t1.exon1;Parent=g9884.t1 NODE_1410_length_11493_cov_42.8311 . CDS 677 1666 . - 0 ID=cds.g9884.t1;Parent=g9884.t1 NODE_1410_length_11493_cov_42.8311 . three_prime_UTR 409 676 . - . ID=g9884.t1.utr3p1;Parent=g9884.t1 #PROT g9884.t1 g9884 MVTVVSLKYPGINASNLSFLPTYAEEQLSSNLFSQAESLPQVPAASVERTTPSCKPNVPLRRSPSKRLQTAKMAPISAAGIKGFVAGAVNFGRVQAQQRQQSPTSAEVRRVPQLSADTSAKSHSAEPSPRTSYPRIQDDDASEGSPGSDDLETFAFDEVSLTDSIRKLEAEIADRSGLGLENESDLKPRAGETDRQRIKRLKNRAAAIRCRNRKRYLILSLQRRTLELTTSNRHLQTRNERLEDEVRYLKTLLVMNSRVPDEMTQRQMLMQQPQTQHSLSSMAGCHAALMSMESAQDLQQDTYQFQLQMLQEFDHLTGDNETVVPFTDF* # ORIGINAL: g9887.t1 original gene structure, not modified by PASA NODE_1410_length_11493_cov_42.8311 AUGUSTUS gene 7367 10199 . + . ID=g9887;Name=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS mRNA 7367 10199 . + . ID=g9887.t1;Parent=g9887;Name=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 7367 7446 . + . ID=g9887.t1.exon1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 7367 7446 . + 0 ID=cds.g9887.t1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 8099 8315 . + . ID=g9887.t1.exon2;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 8099 8315 . + 1 ID=cds.g9887.t1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 8587 8712 . + . ID=g9887.t1.exon3;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 8587 8712 . + 0 ID=cds.g9887.t1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 8990 9061 . + . ID=g9887.t1.exon4;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 8990 9061 . + 0 ID=cds.g9887.t1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 9374 9567 . + . ID=g9887.t1.exon5;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 9374 9567 . + 0 ID=cds.g9887.t1;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 9791 10199 . + . ID=g9887.t1.exon6;Parent=g9887.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 9791 10199 . + 1 ID=cds.g9887.t1;Parent=g9887.t1 #PROT g9887.t1 g9887 MEDLADALAGGFRVSSGTNNTAAQHPRRRDAAKQTMRMLPESASEESESGSDGEVDSALPRKKSRVADLSADKAADENAPIDNLMETSADATTRPNSCQNDADMGSDDTAGRPSRRVHTGEGEKRANPYKNRLMLSEWLVEVPQDLSTAWSFVLCPMGKRCLVIATNGATSAYQRNGYLITRFMSRLPGGGKAKQRGNYAALDCVYDERRGTFFVLDVMCWGENHPVHESEREFRHFWLHSKLSECDGIGSRSPTNEHPFVPLQAHECTPENVAAATAYAMQQLQRHASTRSSQTPGKDPAAVGMETDSPATSSADNFDVDGLLFYHNGASYVAGSTPLVGWLKPHMVGEVLGVTVPRMPRPDIL* # ORIGINAL: g9885.t1 original gene structure, not modified by PASA NODE_1410_length_11493_cov_42.8311 AUGUSTUS gene 2351 2593 . + . ID=g9885;Name=g9885.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS mRNA 2351 2593 . + . ID=g9885.t1;Parent=g9885;Name=g9885.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS exon 2351 2593 . + . ID=g9885.t1.exon1;Parent=g9885.t1 NODE_1410_length_11493_cov_42.8311 AUGUSTUS CDS 2351 2593 . + 0 ID=cds.g9885.t1;Parent=g9885.t1 #PROT g9885.t1 g9885 MAANARSEFIDAAKLPRGEVLSALSSEYRRSPKVCRQLVTDVDVTAWHSIIIPKVGYPADNFNIAPPAAIDWIAFSAAAA* # ORIGINAL: g10432.t1 original gene structure, not modified by PASA NODE_847_length_16874_cov_42.0972 AUGUSTUS gene 3842 6056 . - . ID=g10432;Name=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS mRNA 3842 6056 . - . ID=g10432.t1;Parent=g10432;Name=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 5670 6056 . - . ID=g10432.t1.exon1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 5670 6056 . - 0 ID=cds.g10432.t1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 5288 5455 . - . ID=g10432.t1.exon2;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 5288 5455 . - 0 ID=cds.g10432.t1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 4988 5095 . - . ID=g10432.t1.exon3;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 4988 5095 . - 0 ID=cds.g10432.t1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 4695 4808 . - . ID=g10432.t1.exon4;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 4695 4808 . - 0 ID=cds.g10432.t1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 4199 4467 . - . ID=g10432.t1.exon5;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 4199 4467 . - 0 ID=cds.g10432.t1;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 3842 4058 . - . ID=g10432.t1.exon6;Parent=g10432.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 3842 4058 . - 1 ID=cds.g10432.t1;Parent=g10432.t1 #PROT g10432.t1 g10432 MSTQAPPGQQHPPAPTQNGGHSMPAHPHALRHDTPERKAIETQLRGLMDKNANCGAVILSRAGMGLHRKPCHPINLIKQLIAGYFDTPHGLDPLGKGARHAQCPQFKLHEDLPPAVTTHENFDSLLIPKEHVSRSRNDTYYLAENVVLRTHTSAHQNRFLKEGQNAFLVVGDCFRRDEIDRSHYPVFHQMEGVRIFTKKEIAESGIPEKEYPFVHLKATLEGLARHLFGDVPMRFVDAYFPFTHPSTELEIFYNNDWLEVLGSGVIHSQIMANCGRGDEVGWAFGLGLERLAMVLYEVPDIRLFWTADDRFLKQFEVGARDPRAPRYKPYSAHPAVKKDVSFWTSPKFSENDMCELVRDVAGDLVESVSKIDEFSMAEKVSFCYRISFRAMERNLTNVEINALMEDIRKQLTNRFDVKLR* # PASA_UPDATE: g10434.t1, single gene model update, valid-1, status:[pasa:asmbl_9661,status:12], valid-1 NODE_847_length_16874_cov_42.0972 . gene 10526 11785 . - . ID=g10434;Name=g10434.t1 NODE_847_length_16874_cov_42.0972 . mRNA 10526 11785 . - . ID=g10434.t1;Parent=g10434;Name=g10434.t1 NODE_847_length_16874_cov_42.0972 . five_prime_UTR 11752 11785 . - . ID=g10434.t1.utr5p1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . exon 11646 11785 . - . ID=g10434.t1.exon1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . CDS 11646 11751 . - 0 ID=cds.g10434.t1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . exon 11368 11492 . - . ID=g10434.t1.exon2;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . CDS 11368 11492 . - 2 ID=cds.g10434.t1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . exon 11130 11271 . - . ID=g10434.t1.exon3;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . CDS 11130 11271 . - 0 ID=cds.g10434.t1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . exon 10526 10845 . - . ID=g10434.t1.exon4;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . CDS 10679 10845 . - 2 ID=cds.g10434.t1;Parent=g10434.t1 NODE_847_length_16874_cov_42.0972 . three_prime_UTR 10526 10678 . - . ID=g10434.t1.utr3p1;Parent=g10434.t1 #PROT g10434.t1 g10434 MSRSSVLVFVAVLCIAACGTASAARAAANDPTACEVCIKVVTTVANSLTPEEAKDEVAIEDKFRSYCKTATNKENRFCYYVGGTDDAATGMLREISRPMISGLPYDVVCQRLKKKDAQICDLKYDKPIDLNAVDLNKLRVRDLRKVLSDWGEECKGCAEKTDYIRRINEVRGKHEKTDL* # PASA_UPDATE: g10431.t1, single gene model update, valid-1, status:[pasa:asmbl_9660,status:12], valid-1 NODE_847_length_16874_cov_42.0972 . gene 388 3211 . - . ID=g10431;Name=g10431.t1 NODE_847_length_16874_cov_42.0972 . mRNA 388 3211 . - . ID=g10431.t1;Parent=g10431;Name=g10431.t1 NODE_847_length_16874_cov_42.0972 . five_prime_UTR 2936 3211 . - . ID=g10431.t1.utr5p1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 2795 3211 . - . ID=g10431.t1.exon1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 2795 2935 . - 0 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 2449 2565 . - . ID=g10431.t1.exon2;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 2449 2565 . - 0 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 2138 2251 . - . ID=g10431.t1.exon3;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 2138 2251 . - 0 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 1393 1519 . - . ID=g10431.t1.exon4;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 1393 1519 . - 0 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 1023 1221 . - . ID=g10431.t1.exon5;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 1023 1221 . - 2 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 664 729 . - . ID=g10431.t1.exon6;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 664 729 . - 1 ID=cds.g10431.t1;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . exon 388 487 . - . ID=g10431.t1.exon7;Parent=g10431.t1 NODE_847_length_16874_cov_42.0972 . CDS 388 487 . - 1 ID=cds.g10431.t1;Parent=g10431.t1 #PROT g10431.t1 g10431 MSSESTDDDHVRREVRVVPGTSLVRWVEQQKKSVERERRRTQQDRIAKVYESNRRHISDNICHPRKFIVDTETAFPAGERQPHRKMAHYDDAVHGSQSATVIPMALEKQIPRYSMWVPIEKNLVVADETVLTHLPYVGDNNEEQAEFFNELRDQYEQMIDEIASAKVHEDVVEEIAKITAAFDSSPFCASRNAARDAKGRKGAPIVPTKSREDLLEALAAVYKSIPAAELAEMLQKSQKDSAPQAQVSFCANVDDAGPIVSVDNMMDSFNTLFCRRCYMYDCRHHGR* # ORIGINAL: g10435.t1 original gene structure, not modified by PASA NODE_847_length_16874_cov_42.0972 AUGUSTUS gene 12299 16699 . + . ID=g10435;Name=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS mRNA 12299 16699 . + . ID=g10435.t1;Parent=g10435;Name=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 12299 12475 . + . ID=g10435.t1.exon1;Parent=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 12299 12475 . + 0 ID=cds.g10435.t1;Parent=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 12878 13328 . + . ID=g10435.t1.exon2;Parent=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 12878 13328 . + 0 ID=cds.g10435.t1;Parent=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS exon 13575 16699 . + . ID=g10435.t1.exon3;Parent=g10435.t1 NODE_847_length_16874_cov_42.0972 AUGUSTUS CDS 13575 16699 . + 2 ID=cds.g10435.t1;Parent=g10435.t1 #PROT g10435.t1 g10435 MFATLKRGWAQIESELNGAVVTPSKTDSEKDAAPSDAQAEGNPVTRKLDSGDWDASVAKAAIENTEATGWSTAPSPHRAPKTKQTAVATDKTTASATAKAQGRPVASEATQSEEAGQLTDSRTVSTTTTRQPPLTATVETAARTDVARTEGPSDRAPQSREGTSAAQSRSEDAAAPARKFDPDVATQEELVVAFKKQSVILQKTRLKCEELIRAYKKIQETQKDTDSASSQQQEQQQQQQEQQHLHYGPEKAKTDLAAALSAREASESEVEALRVKLIEYDARKMLDDGDRVLLVSKLEAAENARAAVENQLQTESRERTLAVDELSSAQSALTLVRSELEAMRAERADLWSQVGALEAKLNAAVASGDVTSLLSSQLSDAEKRVATLEAELSAARADGEASARQLEDAEAARHALEVAIEDLRASHVCDIEEAVREANAAASDAAVVAEEEWELQRSEWGDTESHLRALLSAAEEAVEAGERDRIVMAESLRNLQEKSAGAGVEDARLADAEVRAKEVLAELVSRVEELEQERNVLTESVRRLEGERDAAAGALSTTNLAVDQLRAEVAGLSGQREALTAENESLQQKVSLQSTRMAALKQKLRSTIDELRTAQALAQAASVEQSDSPAAVALPGTSAESAAENLDVSGLISRVSAAEEALSISRAEVSELNDALASSSARLEAIAADCDTLSAELNTSRAENASLLARLHAAESEAVMSDAAVRDAESRLDAVSSALTEERTLRSRAEGVTAADVDARRVEVDQLTNALATATEECRRLGGEAEAGAGERDALNDKADRLARELSARTEELSSLKEEMSARTMELTSLKEEMSVRTEELSSLKEESSARTAELSLLKEEMSARTEELSSLKEEMSARTMELSSLKEEMSARTVELSSLKEEMSARTMELTSLKEEMCARTVETASGSAATDALRQSLAAAEAQRDAFVAQIDALNALHAPSGVDAAALAEEADRLKQDVAAAVDARDRLQDELSLHASQLQHAQAELKLTAASLQKAMADLTSTRAEADALRSHLESAAVSSAATIERVHAELSAAQARVVASDKETLMLRARLAEQEHNVDALRAQLSESRSEAAAAKKTAEEHAQAVERARADARASSDGLAGAKLLSLELEDYRRTIDELSERIRQLETSNAEGTERLGGAVKECALLREALDDKGSKLAAAEAKLQKFAALLQKAKTEISEARRSVVEKDSALKDAAEREERLNQARDGVPPTFHATVSCACAV* # PASA_UPDATE: g10433.t1, single gene model update, valid-1, status:[pasa:asmbl_9662,status:12], valid-1 NODE_847_length_16874_cov_42.0972 . gene 6886 10165 . + . ID=g10433;Name=g10433.t1 NODE_847_length_16874_cov_42.0972 . mRNA 6886 10165 . + . ID=g10433.t1;Parent=g10433;Name=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 6886 7080 . + . ID=g10433.t1.exon1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 6886 7080 . + 0 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 7321 7404 . + . ID=g10433.t1.exon2;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 7321 7404 . + 0 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 7625 7877 . + . ID=g10433.t1.exon3;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 7625 7877 . + 0 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 8155 8300 . + . ID=g10433.t1.exon4;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 8155 8300 . + 2 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 8568 8695 . + . ID=g10433.t1.exon5;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 8568 8695 . + 0 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 8929 9005 . + . ID=g10433.t1.exon6;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 8929 9005 . + 1 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 9249 9374 . + . ID=g10433.t1.exon7;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 9249 9374 . + 2 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . exon 9647 10165 . + . ID=g10433.t1.exon8;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . CDS 9647 9828 . + 2 ID=cds.g10433.t1;Parent=g10433.t1 NODE_847_length_16874_cov_42.0972 . three_prime_UTR 9829 10165 . + . ID=g10433.t1.utr3p1;Parent=g10433.t1 #PROT g10433.t1 g10433 MPVYSKLLVGAAALFAAGAAYYFLAPKKKGSFPGDGRPSYADVAARPAANPLASAPASEHVTAAAASAVPNLNGPRFASEKPKIKSIQQLAVEEVGYNPRRRMSVSAESLRPNEGGAETHTQVVYPKSDEAMARIAAACSGNLLFRNLEPDQRRGIFDAMFERRVTAGEEVIKQGDEGDNFYVVDSGAFDVYISRDGAPAKKVVHIAAGGSFGELALMYNTPRAATVVAATDSVLWAVDRVTFRRILMDTTYQKRKLYEGFLASVPLLSSLTTTERSKVADALEPMEYEDGDAIVEQGETGQTFYIIEDGIAIVTRKLADGNTIEVNRLGKGDYFGELALLNDTSTRQATVTASGTVKVVVLDKQAFIRLLGPCNDILKRNLENYRSFHIAHSAPN* # ORIGINAL: g11369.t1 original gene structure, not modified by PASA NODE_4777_length_1251_cov_83.0255 AUGUSTUS gene 190 1251 . - . ID=g11369;Name=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS mRNA 190 1251 . - . ID=g11369.t1;Parent=g11369;Name=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS exon 855 1251 . - . ID=g11369.t1.exon1;Parent=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS CDS 855 1251 . - 0 ID=cds.g11369.t1;Parent=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS exon 491 643 . - . ID=g11369.t1.exon2;Parent=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS CDS 491 643 . - 2 ID=cds.g11369.t1;Parent=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS exon 190 336 . - . ID=g11369.t1.exon3;Parent=g11369.t1 NODE_4777_length_1251_cov_83.0255 AUGUSTUS CDS 190 336 . - 2 ID=cds.g11369.t1;Parent=g11369.t1 #PROT g11369.t1 g11369 YVIGVDSNEAESTFAGKPEVQRSKIITSAEKRADIAVYLSIMERLRGEFRGGTKLVDARLGGVALSPCPNALSCGVLAGQVAVVEADSSSQCTRTSVVDKQTRINRIFDGVKNGIVPTGVTADGYIASITSIEDEKWATVKLFGSSPTPRQGHSVSVSSDNTVFVFGGEDANGPTNDLRILDFDMQEWRMSNSSVVPPKRTTHSAVVYEGNLIVFGGRDGLIVLDDVYLYNK # PASA_UPDATE: g10116.t1, single gene model update, valid-1, status:[pasa:asmbl_4716,status:3], valid-1 NODE_2648_length_5554_cov_41.8096 . gene 654 3718 . - . ID=g10116;Name=g10116.t1 NODE_2648_length_5554_cov_41.8096 . mRNA 654 3718 . - . ID=g10116.t1;Parent=g10116;Name=g10116.t1 NODE_2648_length_5554_cov_41.8096 . five_prime_UTR 3572 3718 . - . ID=g10116.t1.utr5p1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 3445 3718 . - . ID=g10116.t1.exon1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 3445 3571 . - 0 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 2991 3175 . - . ID=g10116.t1.exon2;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 2991 3175 . - 2 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 2361 2533 . - . ID=g10116.t1.exon3;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 2361 2533 . - 0 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 1975 2103 . - . ID=g10116.t1.exon4;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 1975 2103 . - 1 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 1547 1676 . - . ID=g10116.t1.exon5;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 1547 1676 . - 1 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 1205 1364 . - . ID=g10116.t1.exon6;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 1205 1364 . - 0 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . exon 654 860 . - . ID=g10116.t1.exon7;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . CDS 682 860 . - 2 ID=cds.g10116.t1;Parent=g10116.t1 NODE_2648_length_5554_cov_41.8096 . three_prime_UTR 654 681 . - . ID=g10116.t1.utr3p1;Parent=g10116.t1 #PROT g10116.t1 g10116 MPICTCFETDDQREQRLRSAEIDARLKKDLKTERSIIKLLLLGAGDAGKSTFAKQLRILHGDPYSEADLKKYRPVVMRNILQAVLQMIMAMKDLGVAFTDNSNLAIADRIQSLSEHVALDLMIDVDESVRDCIRLLWMDDGFKSVLDFERRCRFQIGDSAGFFLDGLDRIFNTDYLPTVEDVLHVRAPTTGIVETRCIVKNVEFRVVDVGGQRSERRKWAHCFDNIVSIIFMSAISEYDQVLFEDESQNRLTESLELFAKFASYPFFKDTSIILFLNKIDVFREKIACNPRSLSMFFPEYDGRTAEEAFILSLFKKRYPSEKGLLYSHYTCATDTECMQKVFKSVEDTLRRYHMRRFGLE* # ORIGINAL: g7534.t1 original gene structure, not modified by PASA NODE_1293_length_12357_cov_40.4036 AUGUSTUS gene 4639 5043 . - . ID=g7534;Name=g7534.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS mRNA 4639 5043 . - . ID=g7534.t1;Parent=g7534;Name=g7534.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 4639 5043 . - . ID=g7534.t1.exon1;Parent=g7534.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 4639 5043 . - 0 ID=cds.g7534.t1;Parent=g7534.t1 #PROT g7534.t1 g7534 MRPTTATPATRTGQPKTFTMHTHGTREVNSHLPVLAPTTVRSNSPQNSAGTSAERASVSNSSNKSASDNSRRARFNNRQRNDSPNGPSAAERTGRSILAFSSTNFHNTAMRERIVNYQGCFCCGDTSHKVDECP* # ORIGINAL: g7536.t1 original gene structure, not modified by PASA NODE_1293_length_12357_cov_40.4036 AUGUSTUS gene 7374 8914 . + . ID=g7536;Name=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS mRNA 7374 8914 . + . ID=g7536.t1;Parent=g7536;Name=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 7374 7569 . + . ID=g7536.t1.exon1;Parent=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 7374 7569 . + 0 ID=cds.g7536.t1;Parent=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 7728 7860 . + . ID=g7536.t1.exon2;Parent=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 7728 7860 . + 2 ID=cds.g7536.t1;Parent=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 8179 8914 . + . ID=g7536.t1.exon3;Parent=g7536.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 8179 8914 . + 1 ID=cds.g7536.t1;Parent=g7536.t1 #PROT g7536.t1 g7536 MYLNIIFLDVQSVECAALRTCATEGVVDHLGEDFGDLVRQMVRMVALRCKDNFETTAKDGRQVTDVPRDRTSVDAALDGLSHGGFTKPTSLDSLKRVAKATAALFADEHRISYGYLLSALLLHQCNAFSISSHGVSDAAIGLFSFAFPLFNHSCAPNAARSHIGKCGGLFPISKSHSRPLVSLEYFPSTVCDGSSDTTSNDALLYTPLFCVHAIRDISTGSEVSIAYAPLRWSDNRRAQLLRDSYGFDCDCERCRSGEMFCLDSYPDLRRLLCLRAGECGIVLPYLDNAKSTTPDEDRIGHGGLTCPFLAACTTDATARDNDVDGDDDVDSDDPIVGMCNQCGCAKRESDCADD* # ORIGINAL: g7535.t1 original gene structure, not modified by PASA NODE_1293_length_12357_cov_40.4036 AUGUSTUS gene 5071 6132 . - . ID=g7535;Name=g7535.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS mRNA 5071 6132 . - . ID=g7535.t1;Parent=g7535;Name=g7535.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 5071 6132 . - . ID=g7535.t1.exon1;Parent=g7535.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 5071 6132 . - 0 ID=cds.g7535.t1;Parent=g7535.t1 #PROT g7535.t1 g7535 MLPTAPRASQLQRGPEPEPFQPRIKLHQPPIMDPTNLNRQAPGNVTDAGPAPEPIMSSAPVAAPQPAVQHVPQVPGMDIAAQVNAQVNAALQAALANIGPQLAHAVAGAMSPLMLKHQLAPQDRQPSLPDHVPAAPFPVTLAPAAAAPAAQLPPLGVGDLRMDLRAYQDVIGQFHSDKVMDNRMDIDDYILRLEAVTHDLPLYTLDMTGLRLLQCLLKDGARSTLDSLLIQPHSLTYTTATDALYRFYRPMNRRLQELKHTFYGTPQGKKEAMIDYCRRKQTESQRIQLADPLHTISDEDLCTTFIRGLFNKEIALVVLNLRKSNLMNNHHRGPNGHQDPTNSAWLFNMAIES* # PASA_UPDATE: g7537.t1, single gene model update, valid-1, status:[pasa:asmbl_1112,status:12],[pasa:asmbl_1113,status:12], valid-1 NODE_1293_length_12357_cov_40.4036 . gene 9399 12202 . - . ID=g7537;Name=g7537.t1 NODE_1293_length_12357_cov_40.4036 . mRNA 9399 12202 . - . ID=g7537.t1;Parent=g7537;Name=g7537.t1 NODE_1293_length_12357_cov_40.4036 . exon 12060 12202 . - . ID=g7537.t1.exon1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 12060 12202 . - 0 ID=cds.g7537.t1;Parent=g7537.t1;5_prime_partial=true NODE_1293_length_12357_cov_40.4036 . exon 11622 11770 . - . ID=g7537.t1.exon2;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 11622 11770 . - 1 ID=cds.g7537.t1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . exon 11053 11342 . - . ID=g7537.t1.exon3;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 11053 11342 . - 2 ID=cds.g7537.t1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . exon 10597 10824 . - . ID=g7537.t1.exon4;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 10597 10824 . - 0 ID=cds.g7537.t1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . exon 10193 10323 . - . ID=g7537.t1.exon5;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 10193 10323 . - 0 ID=cds.g7537.t1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . exon 9399 9985 . - . ID=g7537.t1.exon6;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . CDS 9715 9985 . - 1 ID=cds.g7537.t1;Parent=g7537.t1 NODE_1293_length_12357_cov_40.4036 . three_prime_UTR 9399 9714 . - . ID=g7537.t1.utr3p1;Parent=g7537.t1 #PROT g7537.t1 g7537 AFEELIAALQEGHCICLFPEGLSRFHPSLAPLKPGIAQIAMEVLRNNRDKGANFSVRLQVCGITYLHREKFRSDVCLEFGAPIILDASMLPSLEADPEAIFRITRLVHRSLRDSVVEAPNWDLVIGANVARRLYAPYGARIALPDHVRLTRRFLRVFECALGLVPTDASDNNAEVVQRATAAAVDIPALFKQLVQYQELLDLVGLKDERIKRETPSAAHIIWSMILRAALCTGLLTLALPGLLMWSPLFAMSKFKEKQLLECGIEDFKDEVTQYKIAFSMFYIPVLVGTLCLLTLPVWPLSVVVIITWLWMSIRWLEDMVASARSFVSLFRLLTTSTERLRMLRRRRAELEAKVAQLAKAMELPNSAEYVRPPPPLSSYFSIRRRRKKDWNEVLRLSDVTKYV* # ORIGINAL: g7532.t1 original gene structure, not modified by PASA NODE_1293_length_12357_cov_40.4036 AUGUSTUS gene 159 1159 . + . ID=g7532;Name=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS mRNA 159 1159 . + . ID=g7532.t1;Parent=g7532;Name=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 159 216 . + . ID=g7532.t1.exon1;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 159 216 . + 0 ID=cds.g7532.t1;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 419 504 . + . ID=g7532.t1.exon2;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 419 504 . + 2 ID=cds.g7532.t1;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 658 771 . + . ID=g7532.t1.exon3;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 658 771 . + 0 ID=cds.g7532.t1;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS exon 1004 1159 . + . ID=g7532.t1.exon4;Parent=g7532.t1 NODE_1293_length_12357_cov_40.4036 AUGUSTUS CDS 1004 1159 . + 0 ID=cds.g7532.t1;Parent=g7532.t1 #PROT g7532.t1 g7532 SPEVYMSGLYSEKADVFAFGIIMWELAFRSMPYRELYGILSDDELLEQVVENMLRPSPNPSRAPAYTALMKKCWDANPDTRPLFPEICETLSNFDGEKLDKEIKEARSKAQSEKQQQVMSPQQQRQQPQQQQQENDD* # PASA_UPDATE: g7533.t1, single gene model update, valid-1, status:[pasa:asmbl_1111,status:3], valid-1 NODE_1293_length_12357_cov_40.4036 . gene 2042 4435 . - . ID=g7533;Name=g7533.t1 NODE_1293_length_12357_cov_40.4036 . mRNA 2042 4435 . - . ID=g7533.t1;Parent=g7533;Name=g7533.t1 NODE_1293_length_12357_cov_40.4036 . five_prime_UTR 4427 4435 . - . ID=g7533.t1.utr5p1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 4339 4435 . - . ID=g7533.t1.exon1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 4339 4426 . - 0 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 3863 4118 . - . ID=g7533.t1.exon2;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 3863 4118 . - 2 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 3458 3500 . - . ID=g7533.t1.exon3;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 3458 3500 . - 1 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 2999 3098 . - . ID=g7533.t1.exon4;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 2999 3098 . - 0 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 2458 2640 . - . ID=g7533.t1.exon5;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 2458 2640 . - 2 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . exon 2042 2173 . - . ID=g7533.t1.exon6;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . CDS 2070 2173 . - 2 ID=cds.g7533.t1;Parent=g7533.t1 NODE_1293_length_12357_cov_40.4036 . three_prime_UTR 2042 2069 . - . ID=g7533.t1.utr3p1;Parent=g7533.t1 #PROT g7533.t1 g7533 MYHCRLTATQLQMDIRFDGKVALVTGAGKGIGREIVRALANGGAKVYAVSRSSADLASLAAEVPGVETIALDLSDVAATEHQLGEITDHIDLLVNNAGVACLQPFLETTVEDFERTMAVNVTAVLVVSQIVARKMVESRKGGSIVNISSQASQRPLVNHTAYCASKGALDQLTRVMALELGPHNIRVNCVNPTVVMTDMGRLGWSDPAKAGPMLSRIPLNRFAEVSDVVNATLFLLSDRSGMVHGCMLPVDGGFLAC* # ORIGINAL: g14489.t1 original gene structure, not modified by PASA NODE_3126_length_4248_cov_40.5011 AUGUSTUS gene 335 3688 . + . ID=g14489;Name=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS mRNA 335 3688 . + . ID=g14489.t1;Parent=g14489;Name=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS exon 335 2584 . + . ID=g14489.t1.exon1;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS CDS 335 2584 . + 0 ID=cds.g14489.t1;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS exon 2837 2867 . + . ID=g14489.t1.exon2;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS CDS 2837 2867 . + 0 ID=cds.g14489.t1;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS exon 3218 3314 . + . ID=g14489.t1.exon3;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS CDS 3218 3314 . + 2 ID=cds.g14489.t1;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS exon 3613 3688 . + . ID=g14489.t1.exon4;Parent=g14489.t1 NODE_3126_length_4248_cov_40.5011 AUGUSTUS CDS 3613 3688 . + 1 ID=cds.g14489.t1;Parent=g14489.t1 #PROT g14489.t1 g14489 MRRGGSYSTPHSKTPRMITIVIFTLLLTAFATHSSLGAPMNDGENNNDNNVWPRLYAEDRVYFYRYESHAHPHAASSHAGTASAPMHVTAKLSVHLVRREDDCDLVSLDVDELELRATDDPAEPPLDGSFVDMGGIFLFCQASNGRILRVLHERDDTPAAINLKKGFVGSFSATLDRNGRDNYDVIRDADHTGDHAADYLVSRSASSLGVGGEDVVITKFKRNTDPDYVEMTHSKTIRRRAVATITEAAPFHDILEEEEMWIMSHTTVVPQARRFQGAAVRMINGRAADVRASRSVWDSAHLGQVPSTAGGAGKRARAARSFSFSSEYTSSHHAGDASPDGPTIPKIDYGIVHKSTVQMTASARVDPNRRRRSIDDDIASLVIDDPILRKIAPETKPLSAVSPGISAALTCLESVGDEAGGASARCYNQLKSHMLSLDERDAVVFAASIIRQAGALSRGPREHMIQVLAEIGTPIAQEALVEAVLRNTQSTLADIIDLCVSTASIGVPTLHFAESVHALCYGSDVENSASRGRLGVSARQHLIVALGGILRNLAFEYPEDARRLYADLEAELATHSIAARRRRQARGDDLPDRFVEANDEDLSHEMSLLLAVGVSALPGSHQWISDAIYGDEETGVGVPSQYHRPLLDALRHSEGPEVESLLVRVALTHHDVVVRDFAVAHFRARPRRGTVSAEINRREPFVTRSTNETDDSGNDASTVVTYGHKGRRMSMRDLDSVLGGFYSVKIGIPQFIMDKKLGSEDMGAKTSVNIIDEASLSLGLAKSSFELNLDNSAYMDAYVFGTSVRVVDGLAVSVVVD* # PASA_UPDATE: g13565.t1, single gene model update, valid-1, status:[pasa:asmbl_6760,status:3], valid-1 NODE_394_length_24878_cov_43.9455 . gene 9911 12466 . + . ID=g13565;Name=g13565.t1 NODE_394_length_24878_cov_43.9455 . mRNA 9911 12466 . + . ID=g13565.t1;Parent=g13565;Name=g13565.t1 NODE_394_length_24878_cov_43.9455 . five_prime_UTR 9911 9954 . + . ID=g13565.t1.utr5p1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . exon 9911 10061 . + . ID=g13565.t1.exon1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . CDS 9955 10061 . + 0 ID=cds.g13565.t1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . exon 10231 10502 . + . ID=g13565.t1.exon2;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . CDS 10231 10502 . + 1 ID=cds.g13565.t1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . exon 10676 10754 . + . ID=g13565.t1.exon3;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . CDS 10676 10754 . + 2 ID=cds.g13565.t1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . exon 10852 12466 . + . ID=g13565.t1.exon4;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . CDS 10852 12439 . + 1 ID=cds.g13565.t1;Parent=g13565.t1 NODE_394_length_24878_cov_43.9455 . three_prime_UTR 12440 12466 . + . ID=g13565.t1.utr3p1;Parent=g13565.t1 #PROT g13565.t1 g13565 MSAEESVERISRSAGIRQGLSSITRAVRELPTRVSKKPAISYKHRLTLSPWDKFRQFRRFPFKLTLNLLVTVLCTARVILATYQYNDYVNGQHAAFDALFKPDPSSSKSSIYTIDGVLNNINGSVHGYFDYASSSVTHMSIFAADGQPYPIVMTLRHYVARHPFQKNATENFDQYSTVHTLTASDPLGPLGALSSGESLRSLFDGLATITIEFRLDSIQMGALISDVVYRWRCRCTYDLASGGGQAQFFLAIWKSVEMNRRGPFFLLDLFSLMLAICSIALTLKALHQSYRVFVFARSRLRMRESGRCSTECESVRWESLSLRDRVAFFNLWYVVTTAADVSLVLACSYAIAVDDRDFIDSTDTIDFGDLTRAAGCFLQWLNLMKYFEWRPDFYVLVLAVRCSLGRVFRFIVTSAPLYMGYALAGVVLFSNVSDKFGSLDNAAVTLFALVNGDSIFDVFTDLAAENDTAYRVLSRVYLYSFCTFFITTVVNVFIFIIEDGYRLASSIEKARPAELVTDTSRLKQILDAAHCVDFAADGQCMYPPHSVEEAVDDVDGLVDSAAERMRDGYAPLSLDEEEEQNDAISSSDIPLQTQGVTDMLIDFGSGEGPSSSLKSASSSPPGHHPIATGLSSIDKLEAEIASIQSTFSAELVQIHTEFIAKVRLLQLDAIGRLQRAICEDK* # PASA_UPDATE: g13566.t1, single gene model update, valid-1, status:[pasa:asmbl_6757,status:12], valid-1 NODE_394_length_24878_cov_43.9455 . gene 12458 13667 . - . ID=g13566;Name=g13566.t1 NODE_394_length_24878_cov_43.9455 . mRNA 12458 13667 . - . ID=g13566.t1;Parent=g13566;Name=g13566.t1 NODE_394_length_24878_cov_43.9455 . five_prime_UTR 13662 13667 . - . ID=g13566.t1.utr5p1;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . exon 13458 13667 . - . ID=g13566.t1.exon1;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . CDS 13458 13661 . - 0 ID=cds.g13566.t1;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . exon 13281 13355 . - . ID=g13566.t1.exon2;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . CDS 13281 13355 . - 0 ID=cds.g13566.t1;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . exon 12458 12801 . - . ID=g13566.t1.exon3;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . CDS 12718 12801 . - 0 ID=cds.g13566.t1;Parent=g13566.t1 NODE_394_length_24878_cov_43.9455 . three_prime_UTR 12458 12717 . - . ID=g13566.t1.utr3p1;Parent=g13566.t1 #PROT g13566.t1 g13566 METAQLSMEGEQLVANLVCDVLELFEFFKSSGGGHDKLATLDRVRSIRKSVESDLSRLAELASSVELRHQSFTSCHSPEELDEMARQIEALNSDMKLRDDTLQSLIRLSRVLVHSITLAS* # ORIGINAL: g13560.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 1770 2775 . + . ID=g13560;Name=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 1770 2775 . + . ID=g13560.t1;Parent=g13560;Name=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 1770 1855 . + . ID=g13560.t1.exon1;Parent=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 1770 1855 . + 0 ID=cds.g13560.t1;Parent=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 2263 2546 . + . ID=g13560.t1.exon2;Parent=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 2263 2546 . + 1 ID=cds.g13560.t1;Parent=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 2675 2775 . + . ID=g13560.t1.exon3;Parent=g13560.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 2675 2775 . + 2 ID=cds.g13560.t1;Parent=g13560.t1 #PROT g13560.t1 g13560 MFECKQASSIGADNLDWAFELVKVNMHSFYVTCDWGWDDEKKRAEMNGERSLYLIGRDESSGECLAFVHFQFDLEDEVEVIYCYEIQLDTKVRGAGLGRFMMQLLELIGMQAKMKKLMLTVFKEKMRYNFDESSPCVCDPADPDYSYEIMFKPLCK* # ORIGINAL: g13567.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 13960 14528 . + . ID=g13567;Name=g13567.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 13960 14528 . + . ID=g13567.t1;Parent=g13567;Name=g13567.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 13960 14067 . + . ID=g13567.t1.exon1;Parent=g13567.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 13960 14067 . + 0 ID=cds.g13567.t1;Parent=g13567.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 14238 14528 . + . ID=g13567.t1.exon2;Parent=g13567.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 14238 14528 . + 0 ID=cds.g13567.t1;Parent=g13567.t1 #PROT g13567.t1 g13567 MAAITKEELATHASRAAGVWFSIHGKVYDVTKFLEEHPGGEEVLMEHAGKDATDAFEDVGHSQDARDMLKDYLKGDLAGTTKAAASAAKAAPAQAPKAAPKAAPKSDNTSNIIKFLIPAVIVVVAIIYKYYL* # PASA_UPDATE: g13568.t1, single gene model update, valid-1, status:[pasa:asmbl_6758,status:12], valid-1 NODE_394_length_24878_cov_43.9455 . gene 14565 18575 . - . ID=g13568;Name=g13568.t1 NODE_394_length_24878_cov_43.9455 . mRNA 14565 18575 . - . ID=g13568.t1;Parent=g13568;Name=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 18240 18575 . - . ID=g13568.t1.exon1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 18240 18575 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 18110 18152 . - . ID=g13568.t1.exon2;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 18110 18152 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 17584 17747 . - . ID=g13568.t1.exon3;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 17584 17747 . - 2 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 16984 17487 . - . ID=g13568.t1.exon4;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 16984 17487 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 16728 16848 . - . ID=g13568.t1.exon5;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 16728 16848 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 16465 16638 . - . ID=g13568.t1.exon6;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 16465 16638 . - 2 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 16318 16382 . - . ID=g13568.t1.exon7;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 16318 16382 . - 2 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 16047 16209 . - . ID=g13568.t1.exon8;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 16047 16209 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 15698 15924 . - . ID=g13568.t1.exon9;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 15698 15924 . - 2 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 15507 15590 . - . ID=g13568.t1.exon10;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 15507 15590 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 15309 15381 . - . ID=g13568.t1.exon11;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 15309 15381 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 14890 15128 . - . ID=g13568.t1.exon12;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 14890 15128 . - 2 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . exon 14565 14782 . - . ID=g13568.t1.exon13;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . CDS 14645 14782 . - 0 ID=cds.g13568.t1;Parent=g13568.t1 NODE_394_length_24878_cov_43.9455 . three_prime_UTR 14565 14644 . - . ID=g13568.t1.utr3p1;Parent=g13568.t1 #PROT g13568.t1 g13568 MRSGCDAYAIQRGIWDHICTSVAAMGLLGGLARRVPLALARTIIATPACVARLSTGTTARLAAFSPSVAAATRPCWNVYVISSAAVRQASTVSGRGMMARFVLEAASRHVGAASQEYRLASSSIPRGGNSNPLGSGEGGPGMPWTVLALLLVPYALMRAAETLPAATTFQDFVADMLSKGEVDKLEVDLDDAVVRVWLHPGAILRGHPYRPADSRGPHFVIEIPSVALFEERMERIQDEMGIPPSDRVPVAYRIVSITFDDIAAVLLPIGMFALFTFLSRRATMGMRGGGGMSPFSMGSAKPTVVGGNKATVKFANVAGMGQAKVEVMEFVSFLKDPERFTELGAKVPKGALLSGPPGTGKTLLAKAVAGEAEVPFFSMSGSDFVEIFVGVGPARVRDLFAQARKSAPCIIFIDEIDAIGRARNARGGFGGNSERENTLNQLLVEMDGFNTTDGVIVLASTNRVDILDKALLRPGRFDRQIGIDLPDLIERKEIFAVHLKGIVLKQPMDAYVERLASLTPGFSGADIANVCNEAALHAARFGKKSVDTQDFEQAVDRVVAGIERKSRVLSPAEREVVAYHEAGHAIAGWFLQHADPIMKVSIVPRGMAALGYAQYLPSDQHIYSSDQLFDRMCMALGGRVAESIVFGRITSGAQDDLQRVTRMAYSQVTSYGMSERVGNVSFPAREPGQPARRPYSDRLATVIDAEAKQIVMRAYARTEELLRSRKDDLVKMAKRLLEREVLTHDDIVALIGPRPTPVPTHAHNTALGDVFSPEKP* # PASA_UPDATE: g13564.t1, single gene model update, valid-1, status:[pasa:asmbl_6759,status:12], valid-1 NODE_394_length_24878_cov_43.9455 . gene 8614 9619 . + . ID=g13564;Name=g13564.t1 NODE_394_length_24878_cov_43.9455 . mRNA 8614 9619 . + . ID=g13564.t1;Parent=g13564;Name=g13564.t1 NODE_394_length_24878_cov_43.9455 . five_prime_UTR 8614 8651 . + . ID=g13564.t1.utr5p1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . exon 8614 8667 . + . ID=g13564.t1.exon1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . CDS 8652 8667 . + 0 ID=cds.g13564.t1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . exon 8831 8970 . + . ID=g13564.t1.exon2;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . CDS 8831 8970 . + 2 ID=cds.g13564.t1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . exon 9074 9199 . + . ID=g13564.t1.exon3;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . CDS 9074 9199 . + 0 ID=cds.g13564.t1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . exon 9293 9372 . + . ID=g13564.t1.exon4;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . CDS 9293 9372 . + 0 ID=cds.g13564.t1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . exon 9483 9619 . + . ID=g13564.t1.exon5;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . CDS 9483 9543 . + 1 ID=cds.g13564.t1;Parent=g13564.t1 NODE_394_length_24878_cov_43.9455 . three_prime_UTR 9544 9619 . + . ID=g13564.t1.utr3p1;Parent=g13564.t1 #PROT g13564.t1 g13564 MAGVVVPRNFRLLEELEKGEKGIGDGTISYGLDDSSDMMLANWTGTILGPPRTAFENRIYSLKLVCGDNYPDEPPTVKFITKINLNFINPKNGAVERSKLPILARWQRNFTMETVLSDIRRGMLSKENVKLPQPPEGVSF* # ORIGINAL: g13559.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 69 819 . - . ID=g13559;Name=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 69 819 . - . ID=g13559.t1;Parent=g13559;Name=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 676 819 . - . ID=g13559.t1.exon1;Parent=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 676 819 . - 0 ID=cds.g13559.t1;Parent=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 500 568 . - . ID=g13559.t1.exon2;Parent=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 500 568 . - 0 ID=cds.g13559.t1;Parent=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 69 413 . - . ID=g13559.t1.exon3;Parent=g13559.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 69 413 . - 0 ID=cds.g13559.t1;Parent=g13559.t1 #PROT g13559.t1 g13559 MFSAEQRAALRSVAARSSSPAAPAASTTTRSEVDDFVRFIERTQGNLGLRMHGLAFARLFNDVGELELCRQHLISYCDLRRDDSAAHSFLGSVLERVGDLHGAVHAYGTSLSLNPRQPRIAATAAAVCVRLLLSGTVGSHSRDELVGTAEHWISLAEPLLADSLAADLLAAKGNRIELERALLENV # PASA_UPDATE: g13561.t1, single gene model update, valid-1, status:[pasa:asmbl_6756,status:12], valid-1 NODE_394_length_24878_cov_43.9455 . gene 2612 5013 . - . ID=g13561;Name=g13561.t1 NODE_394_length_24878_cov_43.9455 . mRNA 2612 5013 . - . ID=g13561.t1;Parent=g13561;Name=g13561.t1 NODE_394_length_24878_cov_43.9455 . five_prime_UTR 4979 5013 . - . ID=g13561.t1.utr5p1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 4862 5013 . - . ID=g13561.t1.exon1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 4862 4978 . - 0 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 4592 4757 . - . ID=g13561.t1.exon2;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 4592 4757 . - 0 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 4376 4484 . - . ID=g13561.t1.exon3;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 4376 4484 . - 2 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 4098 4287 . - . ID=g13561.t1.exon4;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 4098 4287 . - 1 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 3879 4002 . - . ID=g13561.t1.exon5;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 3879 4002 . - 0 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 3644 3798 . - . ID=g13561.t1.exon6;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 3644 3798 . - 2 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 3419 3543 . - . ID=g13561.t1.exon7;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 3419 3543 . - 0 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 3183 3280 . - . ID=g13561.t1.exon8;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 3183 3280 . - 1 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 2942 3091 . - . ID=g13561.t1.exon9;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 2942 3091 . - 2 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . exon 2612 2854 . - . ID=g13561.t1.exon10;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . CDS 2802 2854 . - 2 ID=cds.g13561.t1;Parent=g13561.t1 NODE_394_length_24878_cov_43.9455 . three_prime_UTR 2612 2801 . - . ID=g13561.t1.utr3p1;Parent=g13561.t1 #PROT g13561.t1 g13561 MALLGTGVTLVLGAQWGDEGKGKLVDLLAQEADVVARCQGGNNAGHTIVVNGVKYDFHMIPSGVIQPSAVSIIGNGVVMHLPAFFEEIEKNEKKGLEGLEKRILVSDRAHLVFDFHQQIDGLQEGEKGKSSIGTTRKGIGPTYSSKASRTGLRVNQLLGDFDDFSSKFKSLVSSSQKRYSSLVVDVDAELERYKVLRERLRPLVTDTVFYINQAVAGAKRVLVEGANATMLDIDFGTYPYVTSSNCTAGGACTGLGLPPKKIVSITGVVKAYTTRVGDGAFPTELTDEIGEKLQTIGREFGVTTGRKRRCGWLDLVVVRYSHMINGYDSITLTKLDILDTFPEIKVAVAYHLHGKKLDSFPADMRNLAEVDVEYITLPGWLAPICHARTFEELPANAQSYVRTIESLTGIPVQFIGVGESRDAIVRMF* # ORIGINAL: g13563.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 6402 7721 . - . ID=g13563;Name=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 6402 7721 . - . ID=g13563.t1;Parent=g13563;Name=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 7540 7721 . - . ID=g13563.t1.exon1;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 7540 7721 . - 0 ID=cds.g13563.t1;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 7035 7332 . - . ID=g13563.t1.exon2;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 7035 7332 . - 1 ID=cds.g13563.t1;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 6709 6856 . - . ID=g13563.t1.exon3;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 6709 6856 . - 0 ID=cds.g13563.t1;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 6402 6616 . - . ID=g13563.t1.exon4;Parent=g13563.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 6402 6616 . - 2 ID=cds.g13563.t1;Parent=g13563.t1 #PROT g13563.t1 g13563 MFAKFVGNAAWRRRLATAAVGVAVAGAGVGYSTVLASSDQVHAPQYPWSHNGLLNTFDHASIRRGYEVYKQVCSACHSLERIAFRNLVGVSHTEDEAKALAEEIQVEDGPDDEGNMFQRPGKLSDYFPKPYKNEQAARSANNGALPPDLSLIIKARHGGGDYVFSLLSGYRDPPGGIALRDGLHYNPYFPGGAIGMARPLYDNMIDYADGTPATTSQMAKDVVTFLSWAAEPEHDDRKRMGLKAMALLVSAFAVSLYLKRHKWSVIKSRKIVYTGPGPLR* # ORIGINAL: g13569.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 19000 24608 . + . ID=g13569;Name=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 19000 24608 . + . ID=g13569.t1;Parent=g13569;Name=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 19000 19554 . + . ID=g13569.t1.exon1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 19000 19554 . + 0 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 19665 19723 . + . ID=g13569.t1.exon2;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 19665 19723 . + 0 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 19816 19873 . + . ID=g13569.t1.exon3;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 19816 19873 . + 1 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 19996 20260 . + . ID=g13569.t1.exon4;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 19996 20260 . + 0 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 20402 20564 . + . ID=g13569.t1.exon5;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 20402 20564 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 20698 20823 . + . ID=g13569.t1.exon6;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 20698 20823 . + 1 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 21031 21308 . + . ID=g13569.t1.exon7;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 21031 21308 . + 1 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 21540 21763 . + . ID=g13569.t1.exon8;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 21540 21763 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 21904 21973 . + . ID=g13569.t1.exon9;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 21904 21973 . + 0 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 22077 22244 . + . ID=g13569.t1.exon10;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 22077 22244 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 22370 22511 . + . ID=g13569.t1.exon11;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 22370 22511 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 22637 22743 . + . ID=g13569.t1.exon12;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 22637 22743 . + 1 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 22853 22994 . + . ID=g13569.t1.exon13;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 22853 22994 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 23114 23634 . + . ID=g13569.t1.exon14;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 23114 23634 . + 1 ID=cds.g13569.t1;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 23797 24608 . + . ID=g13569.t1.exon15;Parent=g13569.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 23797 24608 . + 2 ID=cds.g13569.t1;Parent=g13569.t1 #PROT g13569.t1 g13569 MATQVGIAATVAAAGAHFVDPYGADPYADYGLDPSVADPAGAEDPPAQEPVPSTPAAEERPAPRAIDPAVVRARRQIALRRWQMLKDVVFNRDVPNYLQSHQAANFVLAIQQGVVPTRSLPHSYPIRCVVFNSTDNSIVSFDTRGANVYLAGRTLKQTTGKEISRLVHIPDFNIYVGSSMDYKIKIFNSKCDVLATIASPKPVLSAVYNSPTHELVTGGIGNVMVWNVRSEKSLVPRLTIVAGMDPEQWISHIALDNKSSRCFAVSENNVMVYDFAGGTHLQTLRDLHLRPITGCIYYEPLQYLVTCSKDGTVKLWDSMVNNVHSFAGHAKAVTSLCFYPFKPLVMTSSLDSTIAVWNLETLSEYTRIQTRFPIEGMTIMRDAQFFSYSTHSIDFWAVQHVSNLFTTISSGVTMLRRITSPGSAARLMAVAEDGSVRLISPVSGSILCTVFPTVDTNALVDVAYVTSEERLYLLMIKGDVLVYNTNSNPCFVLEVWPAKSSAKERCKCMCIYDYVVDQRRLSLIEKGDRWLMLGMFAVRGTTSNSKSKTLLLGGLQNGMIAVYDRNNLGKIEFSVQAHAGEVEQLLPDAMHSRLISSGTDRMVRVWHLYPYSQDVLIPVQTIACHQQPSMLRIFNHSLCVATEDAAILMFDISEKGTQSHHATDEDHTGRITGLSACKPLGIFVSSSTDGTIKVWDKDNALIREIQLNEPIPSVAFLNTRGDIVVGLHNHIHVIRAVDYLPVNPSRFFTLATTKEDIREDPIKFDPDLEFWRTPRDRESSHKSLLGLADRREDIALQSSIQLGGRHFVRNADRRASIAVPIDFDGSRPLSSAISGLLPAAISAQGSQQLHQQPLQVGLVQAQAQAQGHVISAPGAGRSRAPSLFPPIAGASTSGPDVVLTGVAGDIARISQRDSDLRYFRDREVSIVDDRTPVLSARAASKYLKYIFPNVDLKTVPAIGDVRAATPVYDDDGGERARKEAELVALAAKLGLPTDHRGIPVIAPDGFIPNSTIIRLLMDLGYMPRPPPPPVQRWRPQSLSDEQRRLLRETADDDDLVDPEPFVPQTSSKLNDWLQMAMQKASPEHSDSEYLEKEDEPPRRVRTPKKRVKVKAAKAKTVILPPDFIAQFSLYDWYPDPQTFEHTMEAFSQQLIAKFLAGDFRVKTEIIQAFQRLTYTPGILRKEPVVDLLANHLDQSLVILVPESDAGHKRASAVSCVIASQQSVRALSYC* # ORIGINAL: g13562.t1 original gene structure, not modified by PASA NODE_394_length_24878_cov_43.9455 AUGUSTUS gene 5258 5755 . + . ID=g13562;Name=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS mRNA 5258 5755 . + . ID=g13562.t1;Parent=g13562;Name=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 5258 5371 . + . ID=g13562.t1.exon1;Parent=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 5258 5371 . + 0 ID=cds.g13562.t1;Parent=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 5506 5591 . + . ID=g13562.t1.exon2;Parent=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 5506 5591 . + 0 ID=cds.g13562.t1;Parent=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS exon 5680 5755 . + . ID=g13562.t1.exon3;Parent=g13562.t1 NODE_394_length_24878_cov_43.9455 AUGUSTUS CDS 5680 5755 . + 1 ID=cds.g13562.t1;Parent=g13562.t1 #PROT g13562.t1 g13562 MSGNNYFVVVGRNDNPIFELELGPAKWTTGQTADAASKKEDHRHLNQFIVHAALDIVEEAMWTTNAMYLKAVDKFNEWFISAYVTSGHIRS* # ORIGINAL: g9762.t1 original gene structure, not modified by PASA NODE_4833_length_1217_cov_36.1086 AUGUSTUS gene 87 1174 . + . ID=g9762;Name=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS mRNA 87 1174 . + . ID=g9762.t1;Parent=g9762;Name=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS exon 87 272 . + . ID=g9762.t1.exon1;Parent=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS CDS 87 272 . + 0 ID=cds.g9762.t1;Parent=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS exon 613 783 . + . ID=g9762.t1.exon2;Parent=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS CDS 613 783 . + 0 ID=cds.g9762.t1;Parent=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS exon 1007 1174 . + . ID=g9762.t1.exon3;Parent=g9762.t1 NODE_4833_length_1217_cov_36.1086 AUGUSTUS CDS 1007 1174 . + 0 ID=cds.g9762.t1;Parent=g9762.t1 #PROT g9762.t1 g9762 GNNVLLYFVKWLERKFPFTWRNWLNEHIYFYLGLGAPLLGATEPIRGVVSGLNMGLPISDLQAKTLEQSFGSVRWFFPIDYSSGKQAGGNTVLERSEWLDEMISVFHSGSQRETMGIADVKSDNLFRRLAKLYNDTRYLQLEDLGERHYKRQPIDVTKEPPSRPPIRHVIMMYGI # ORIGINAL: g11293.t1 original gene structure, not modified by PASA NODE_1233_length_12868_cov_41.3641 AUGUSTUS gene 1880 6031 . - . ID=g11293;Name=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS mRNA 1880 6031 . - . ID=g11293.t1;Parent=g11293;Name=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 6013 6031 . - . ID=g11293.t1.exon1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 6013 6031 . - 0 ID=cds.g11293.t1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 5563 5845 . - . ID=g11293.t1.exon2;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 5563 5845 . - 2 ID=cds.g11293.t1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 4274 5249 . - . ID=g11293.t1.exon3;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 4274 5249 . - 1 ID=cds.g11293.t1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 3599 4001 . - . ID=g11293.t1.exon4;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 3599 4001 . - 0 ID=cds.g11293.t1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 2312 3380 . - . ID=g11293.t1.exon5;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 2312 3380 . - 2 ID=cds.g11293.t1;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 1880 2096 . - . ID=g11293.t1.exon6;Parent=g11293.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 1880 2096 . - 1 ID=cds.g11293.t1;Parent=g11293.t1 #PROT g11293.t1 g11293 MAESGPAAKRQKTDTDAPPPAKLDVWSEERLGRFRRGILSITSTLETSKFVSAVKSSLRSLSGGDVVAASVIVYNEDQNELYELSEKGDEPRIKADESSLWAGIKSGEITRVRVDSLVGLSSLKAATELASAIPLSPPLNVTGEVGDCAPSLAMGSHASLPNAGVIGLLLVAHTAHTLHPDVAVFAEHVAPCLGNVLNHDMMRASASRLGIVVDASETLGGADTDTVTGAMLSRLRSMIKADRCSLWLLDSSTDELRLRRPLRSRDSICADDNGDDFASTAPSAVGSPRKPRDAVTSQGTITAASLHQRVRRKESIDTEEMSSGGIVGVVFRGGMTVNMPDVTKSPLYDPIVDGPAAAILCLPIGAPDGSIIGVVSLVNNSPARVFTDADEIVANDLLKIYGVVLRNSLMLDDQRAARKQSEVLLKVAESLFNNVGDTTSLLREIMKEARRLINVERCSIFLLDKPRKELYATVFDLTDYSYEDGSGNGSGKAPAGESGLGAVVSPVVADIMRTSSATGIVAIDEIRFPSNAGIAGHVVTTGKMELVPDVYLDPRFNREIDARTGFRTRNLLCIPIKDGDEVIGVAQLLNKRGGGLFTKSDMVLASAFAVYCGISVRSALMFAEVSKAESRTKVAIEMMSYHMRVKPGELERFIAMELPPINSFYEAKMLRFGLAPMTDDETVMMTLAMFHDLGVVQRFRIPTETLVKFVLTVKRGYRDVPYHNWMHAFSVAQFCYALEINCGMSTHLDHARVCALFVSCLCHDVDHRGTTNAFQKLAGSSLAALYSSEGSVMERHHFAHTVCILNAEGCNIFQGLSMNEYQSMLDIIKTNILATDLAHHFTIRPRLEQLTAGRYVKDDPDHRQLLCSLVMTTCDLSSISKPWDLSRQIADLIYTEFFAQGDIERARGSQPMEMMDRFRANKPKLQLGFIDSIALPAFRILAGVVPATKEAEQAVLDNRQRWTRVLEEQDAAAAAAAVAAADGGQASA* # PASA_UPDATE: g11292.t1, single gene model update, valid-1, status:[pasa:asmbl_885,status:12], valid-1 NODE_1233_length_12868_cov_41.3641 . gene 323 756 . + . ID=g11292;Name=g11292.t1 NODE_1233_length_12868_cov_41.3641 . mRNA 323 756 . + . ID=g11292.t1;Parent=g11292;Name=g11292.t1 NODE_1233_length_12868_cov_41.3641 . exon 323 756 . + . ID=g11292.t1.exon1;Parent=g11292.t1 NODE_1233_length_12868_cov_41.3641 . CDS 323 610 . + 0 ID=cds.g11292.t1;Parent=g11292.t1 NODE_1233_length_12868_cov_41.3641 . three_prime_UTR 611 756 . + . ID=g11292.t1.utr3p1;Parent=g11292.t1 #PROT g11292.t1 g11292 MQPPPTSPPPPPPAHPHTPQHLSVFDYACIAGTTDNRVVEWVDHLHEHFVHPAKVRNGHYVVPHDAGYSIEMKPASLAEFEYPNGDYWVKDAATH* # ORIGINAL: g11294.t1 original gene structure, not modified by PASA NODE_1233_length_12868_cov_41.3641 AUGUSTUS gene 7713 12792 . + . ID=g11294;Name=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS mRNA 7713 12792 . + . ID=g11294.t1;Parent=g11294;Name=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 7713 7947 . + . ID=g11294.t1.exon1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 7713 7947 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 8341 8558 . + . ID=g11294.t1.exon2;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 8341 8558 . + 2 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 8724 8822 . + . ID=g11294.t1.exon3;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 8724 8822 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 9185 9415 . + . ID=g11294.t1.exon4;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 9185 9415 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 9743 10744 . + . ID=g11294.t1.exon5;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 9743 10744 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 10960 11079 . + . ID=g11294.t1.exon6;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 10960 11079 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 11371 11535 . + . ID=g11294.t1.exon7;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 11371 11535 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 11687 11748 . + . ID=g11294.t1.exon8;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 11687 11748 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 11954 12092 . + . ID=g11294.t1.exon9;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 11954 12092 . + 1 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 12250 12343 . + . ID=g11294.t1.exon10;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 12250 12343 . + 0 ID=cds.g11294.t1;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS exon 12662 12792 . + . ID=g11294.t1.exon11;Parent=g11294.t1 NODE_1233_length_12868_cov_41.3641 AUGUSTUS CDS 12662 12792 . + 2 ID=cds.g11294.t1;Parent=g11294.t1 #PROT g11294.t1 g11294 MMSDDDEIELISDPYGPLRFVDEERRAGLGSPAATRASSATPTAQSSLGKKSSSRPVSRQMSRQRSLSVMERADADATAGEEGVAPDECVLDNGQGRIIYTNDALKNAPSQFSDNKIHTGKYNMFTFLPRFLFDQFSRYANLFFLFIACIQQIGDVSPTGQYTTAVPLLLVLSATAVKEIIEDWRRHKSHDEVNNRQTRVLRGGVFERLRWTDVCVGDIVKVSNGKFFPADLLLLSSSEPQGMCYIETSNLDGETNLKIRQGLPQFAKLTSPREVRSLHGIITCEHPNNSLHTFVGNIRESSSGMAVPLGPTQLLLRGAQLRNTPWIYGVAVFTGHDTKLMRNQTVAPMKRSHVDHVTNRQIIYLFLVLVGMSLFCAIGDAAWSAKHEKDHWYLDLDGSGGRNFVLAFFTFLILLNNLIPISLIVTLEVVKFIQATFINNDIEMYHADSDTPALARTSNLNEELGQVKYIFSDKTGTLTCNIMEFRRASVAGISYGQVGDGSGEATQSQSASKSAGRPPMGASAARLVNESTGSFIDVMPPTVQAPAISDPALLENMTNGHPTASVIREFLTLLAVCHTVIPERNKENPGEIIYQASSPDEGALVRAVKQLGFSFNVRTPDSVIINALGREETYKVMNVLEFNSTRKRMSVIVQCPDGRLKLYCKGADTVIYERLSSVQPFAEATNRHLEEFANQGLRTLCLGVAELNQQRYEQWAKGYHAASIAIENREELMDKSAEEIETNLFLLGATAIEDKLQDGVPETIKDLSDAGIKIWVLTGDKQETAINIGFSCKLLTEGMTLLACNETTKDATRNYILGKLRELEDIVGSESQ # PASA_UPDATE: g10461.t1, single gene model update, valid-1, status:[pasa:asmbl_9863,status:12], valid-1 NODE_892_length_16146_cov_42.0833 . gene 509 2845 . - . ID=g10461;Name=g10461.t1 NODE_892_length_16146_cov_42.0833 . mRNA 509 2845 . - . ID=g10461.t1;Parent=g10461;Name=g10461.t1 NODE_892_length_16146_cov_42.0833 . five_prime_UTR 2773 2845 . - . ID=g10461.t1.utr5p1;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . exon 2715 2845 . - . ID=g10461.t1.exon1;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . CDS 2715 2772 . - 0 ID=cds.g10461.t1;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . exon 2069 2478 . - . ID=g10461.t1.exon2;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . CDS 2069 2478 . - 2 ID=cds.g10461.t1;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . exon 509 1858 . - . ID=g10461.t1.exon3;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . CDS 746 1858 . - 0 ID=cds.g10461.t1;Parent=g10461.t1 NODE_892_length_16146_cov_42.0833 . three_prime_UTR 509 745 . - . ID=g10461.t1.utr3p1;Parent=g10461.t1 #PROT g10461.t1 g10461 MIRNIVPRGANTYSYFTRTVIAAPPVSGRVRRSKHTDATAGPKVPITVAYGDGIGPEIMNATLKILDSAGARIAPETIEIGEKVYRRGISAGIEPSAWESLRRTKVFLKAPITTPSGGGYKSLNVTVRKMLGLYANVRPCISLHPFVHCKHGPINMVIVRENEEDLYAGIEHRQSDEVYQCLKLVSRPGCEKIIRYAFEYARANKRKRVTCMTKDNIMKLTDGLFHSIFNEVAAEYPDINHDHMIIDIGAARIADSPHTFDVIVTLNLYGDIISDIAAQVTGSVGLGGSANIGDACAMFEAVHGSAPDLAGKSVANPSGLLLSSVAMLSHIGQPDAAERLHNAWLSTIEEGFHTPDIFQPNGAHSRVLCSTEKFADAVIDHMGQYPQQLRPVKYSSEPNTSVGMKTITISKPAPSKKELVGVDVFLHWRGDPNNLGPALDKINGDGLELQMVTNRGVKVYPGGIPETFCTDHWRCRFHRKDGAPALSLTNVVSLLLRVNNAGFDFVKSEHLYLFDGKAGYSLGQGQ* # PASA_UPDATE: g10462.t1, single gene model update, valid-1, status:[pasa:asmbl_9864,status:12], valid-1 NODE_892_length_16146_cov_42.0833 . gene 4230 16041 . - . ID=g10462;Name=g10462.t1 NODE_892_length_16146_cov_42.0833 . mRNA 4230 16041 . - . ID=g10462.t1;Parent=g10462;Name=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 15755 16041 . - . ID=g10462.t1.exon1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 15755 16041 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 15331 15563 . - . ID=g10462.t1.exon2;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 15331 15563 . - 1 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 14916 15038 . - . ID=g10462.t1.exon3;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 14916 15038 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 14746 14784 . - . ID=g10462.t1.exon4;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 14746 14784 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 14302 14441 . - . ID=g10462.t1.exon5;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 14302 14441 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 13463 14065 . - . ID=g10462.t1.exon6;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 13463 14065 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 13092 13223 . - . ID=g10462.t1.exon7;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 13092 13223 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 12368 12853 . - . ID=g10462.t1.exon8;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 12368 12853 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 11880 12054 . - . ID=g10462.t1.exon9;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 11880 12054 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 11438 11626 . - . ID=g10462.t1.exon10;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 11438 11626 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 11100 11242 . - . ID=g10462.t1.exon11;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 11100 11242 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 10502 10921 . - . ID=g10462.t1.exon12;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 10502 10921 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 10092 10255 . - . ID=g10462.t1.exon13;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 10092 10255 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 8805 9871 . - . ID=g10462.t1.exon14;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 8805 9871 . - 1 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 8326 8428 . - . ID=g10462.t1.exon15;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 8326 8428 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 7789 8005 . - . ID=g10462.t1.exon16;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 7789 8005 . - 1 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 7371 7619 . - . ID=g10462.t1.exon17;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 7371 7619 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 7072 7168 . - . ID=g10462.t1.exon18;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 7072 7168 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 6674 6761 . - . ID=g10462.t1.exon19;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 6674 6761 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 6273 6378 . - . ID=g10462.t1.exon20;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 6273 6378 . - 1 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 5826 5867 . - . ID=g10462.t1.exon21;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 5826 5867 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 5484 5628 . - . ID=g10462.t1.exon22;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 5484 5628 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 5223 5321 . - . ID=g10462.t1.exon23;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 5223 5321 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 4778 4923 . - . ID=g10462.t1.exon24;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 4778 4923 . - 2 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . exon 4230 4575 . - . ID=g10462.t1.exon25;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . CDS 4522 4575 . - 0 ID=cds.g10462.t1;Parent=g10462.t1 NODE_892_length_16146_cov_42.0833 . three_prime_UTR 4230 4521 . - . ID=g10462.t1.utr3p1;Parent=g10462.t1 #PROT g10462.t1 g10462 MRDEAVIIMRHNTVVAAIPCDRRREKYASVCGSVLLALSLALVQSAILQVDAAGPIVGGAGGCVYYNNERNLMSMGTQRIMTGLPTQAITVEYWVKYINDYKYRTRQYNTISYASGNVVKDANTNVTDDNVLTWSNFGASFALYFLPSITGGAFLDLPATGGPALEFDSWHHWAFTWNTTTGTVAVYFDGVPNSNATFNKFKGISLPSSGAFVIGQDQDSVYGDFDPVQGLIGLFDELRIWNYERSWNEIRSTMNTALQGNEAGLWGYWPFDEMTGDTAANKVSGNNQPFKLGGIFDAGTDGCSGGSDPTRTPAWSTSTAPLIGSAPVVVRANPVTWHKLSIPFSGTTGAVTYSISNFAANCGAAALAIDSAGATAVTETTFASVSGASSTDLWVNVPSGFAGCNFAFSIKDTAGTTAGTVRLFANSKPTAIPINVNADEDSAEMIFGLRGTDAENDITKSAKIVTLPAKGVLYELDGNFNRVRAITAANTVLNYLGAGVQYVAMANSFGKPYDSFTFTVTDWNGRESDPGTATININPVNDLPTASNNPYFLSFDGVDDYMAMPILNLNSLNTFTVQMWLSPNAFTGTVFSTSPVDQYSLRLANGSPKTIEFYVSGTKILSGTYPSTANLWTHVAVTRNALNFQLYVNGTMVNAGTAGAAPSGDGSKMVFGNLYNGGLDEFSVFSNVRTLNTLSLDQLSKRSTGETGLVAAFSFDTGYGETVSCVAAASCSITAELGTGVKSTVPAWRESPLRTSAQYDSFPRFDIHVLDEDTPTVIQLTSGDVDSDARVVMAYVTSIPATGKLYQYDSTKPNNIGDEITPYLAWKNTQEPLLQWTYKVPHIPNVRCCTPSEVFDVITTCNWCNRTDTSLRFGTQYDVRRYGVHALLFNDGKPVRYNPDAADKGYGDYRMALCPVTTGDPGTGGVRDCVSGPVGTVNQNPFRWACPNNTENDFIDISFKTPLYLQTITIYENYYPGASVKIHARHPVSQDWVTIWEGAPQKELYNSQGEYISGTYRVFEPNVCQATFLVDTIRIERATHLIPGWNEIESVSMTGVPALKEGVVIDSLRRVVYVPAKDRNGMKLDNIQYRANDCPFTATRESPVGTRYFTVLPVNDPPQPVSGAASTEAGSLQAPFSAFQGVPSTITIRANDVDAQALRFVFTKLPGTGSLVYAGVTLSVGAQIVAPNVNNTLLLTLQAGHCGLDTATYYLSDGVSTSAETTFYISVACKSSGIAPYVIAVPVVLGTAALFFILFGLWYRERKKKQSFEQELHALVWKIDYAELNMTAAGRAGSRVFASQASMKSHASSGSGRSGANKQVFAQIAKYKGQVVAVKPLNKKTVELTRSVLMEAHYVREANHANVARFIGATITPDQPIAIVMEYAAKGSLLDVLQNAHYQLDWMFKFSLLSDCAKGMAYLHATPIGAHGRLRSSNCLIDSRWVLKITDYGLDGLKAGQTVDEDMGSYARALPLLWVAPENLPESSSAGIEAARKSLAGDVYSFGMIFQEMITRDFPYAESGLEPAEIVAQVQKSSLRPKTSHEDAPADLIHLMTKCWDDNPEVRGKFDDIVRDIRKINPDKSDNVMEHLSKMLEKYANNLEGLVEERTMELESEKKKTEELLYRMLPRAVAEDLRVGKQVKAESFDMVTIFFSDIVGFTDIAGKSTPLQVVDLLNDLYTCFDSIIDSYDVYKVETIGDAYMVASGLPTRNENRHAGEIATMALDLLSATTEFKIRHMPHLQLQLRIGMHSGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFALRIHMSEATVTVLRQLGGYHIELRGTLAVKGKGDMTTYWLLGKDGYNKPMPDLANAASMSQHHFK* # ORIGINAL: g2464.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 12630 13130 . + . ID=g2464;Name=g2464.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 12630 13130 . + . ID=g2464.t1;Parent=g2464;Name=g2464.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 12630 13130 . + . ID=g2464.t1.exon1;Parent=g2464.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 12630 13130 . + 0 ID=cds.g2464.t1;Parent=g2464.t1 #PROT g2464.t1 g2464 MGLRGLVLFDLNGTLIDRTKNIRAAVPRTALVRLVIQLVRTSEWQIGIYSSMMLHNVNAILHKILPPDVVSNMVVFPREFNVAGGGPEWWKTVRCFDLVWNSEFARQRGFHKNNTFMVANDNCKNACPELLIKVPTFVADQETDEQGQQVADAVFERFAAHHEFRR* # ORIGINAL: g2468.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 19694 19945 . - . ID=g2468;Name=g2468.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 19694 19945 . - . ID=g2468.t1;Parent=g2468;Name=g2468.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 19694 19945 . - . ID=g2468.t1.exon1;Parent=g2468.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 19694 19945 . - 0 ID=cds.g2468.t1;Parent=g2468.t1 #PROT g2468.t1 g2468 MATQWSAGATSNYTGIVEIYEAPMITELPFHNTLAEKDATIAKLREDLLRKDATIAKLDMKVKNLCENIQPYSGKADYAASFG* # ORIGINAL: g2465.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 14655 15969 . + . ID=g2465;Name=g2465.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 14655 15969 . + . ID=g2465.t1;Parent=g2465;Name=g2465.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 14655 15235 . + . ID=g2465.t1.exon1;Parent=g2465.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 14655 15235 . + 0 ID=cds.g2465.t1;Parent=g2465.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 15474 15969 . + . ID=g2465.t1.exon2;Parent=g2465.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 15474 15969 . + 1 ID=cds.g2465.t1;Parent=g2465.t1 #PROT g2465.t1 g2465 MDSSVIQKQLGLLDVPVEVFVKHIRPHVDPRDMLQLSRVCSAMRNLWRSECVYSLRPSVALRLIVDKTFCDTFPLPKRQLKIVIDNDDLYWACKSAPDLAVRMVTGFSAGGKRHSLYICVGENSVLESAVTVTCGSDVKDVSALAGVHTLNLAGCKNVTDVSALGGVHTLNLTGCKNVTDVSGLGGVHMLNLEGLCRNVTDVSALGGVYSLNLENCTRVTDVSALGRVHTLNLLCCENVTDVTALGHVHTLNLFGTGLRDVSALCNVHKLDLRFTKVSNVSALGNVHTLNLSGCKHLEDVSALGTVHDLNLHGCVRITNVSSLGDVHTLDVGCCTGITDFTGLTNVKILHNDPWCDCC* # ORIGINAL: g2473.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 33891 35123 . + . ID=g2473;Name=g2473.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 33891 35123 . + . ID=g2473.t1;Parent=g2473;Name=g2473.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 33891 35123 . + . ID=g2473.t1.exon1;Parent=g2473.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 33891 35123 . + 0 ID=cds.g2473.t1;Parent=g2473.t1 #PROT g2473.t1 g2473 MNVPLEECSKISSGEPDSNKVIWLRRLDGGVIKIGPAKHLELYDNTIIGSELTPEFFRLASLYLPELNESAKYEYKVSAATTSKAYGTIIFSATKQKPYILLPLPLYETAMKQIAAFRPSMTISGSVFVPPFASTEIGQRTSSLRSAFSTVNAELATVLRSMSTTPSNSTMSQISPTSQTQQTSQTQQTQQTQQTSQTQQTQQTQQTQQTQQTQQTQQTQQTQQTQQTQDKSRNSVTVARGRNPALLALDFDKTVLKFHTGSEAEFADVTKFVSIRDHFADYSFFMCVVRGFLVRPGAHVAIVSFGRRSVICAYLERCFGPNDAKKINVFTPSCLPGGTDGTALSNKNGLLRLACESAGIIDRSEVAYFDDDLANVNAAILDYYPNSFHAKDGFTSAVWSSAYPPRTTGL* # ORIGINAL: g2482.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 52317 54077 . - . ID=g2482;Name=g2482.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 52317 54077 . - . ID=g2482.t1;Parent=g2482;Name=g2482.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 52317 54077 . - . ID=g2482.t1.exon1;Parent=g2482.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 52317 54077 . - 0 ID=cds.g2482.t1;Parent=g2482.t1 #PROT g2482.t1 g2482 MQSFNLHCAARRPYRLTIFLVTIAAIQSVINSPTLADAASTSCTSCSALQLQVCASCGSWSCSYQSFNGVASCSYTCPCAGSNSGGSSSGGGTGSTAGSACASCSSLKSLVCASCESWSCSYQSINGIASCSYTCPCTGVSSGGTGSSGGGVSSGGTSGSSGSGGNSGSSESGGGGASSGVGTTCTSCSELKSRVCMSCALWSCSLQSFNGVASCSYTCPCDGNSAGPGSSGCVTEASDGTLSYAAVSNNFKSQRFWIAVAIIAGFLGLEWVLQWLLFNKRLLCCLSAETARNNDTRLAVATLVDQRKSDSIATWRNSPSCCGTCDTFAWLCIPGCYGRFWDEVKWMLLRKFYVDNLWEQRTSILAFLKDEMELLSLIYGDDHAYRRSVRRAAFAMKLAGQLGFSIIFTTLKNGAKSTSVNCLNGQYTSTSSQTDGIGFAVDTDGVGAVFFVFLAAGALGNLAEYHGQLAHDLHKPKTGIAMLLIFGVKWLVGCIIAKVVMGNGTYILAYFLVFIISLVVNIVNDAGLVVVRFYLGRTFYKSLEPRPAPIPAVTDEDVAAFLSAPLTPAKRHHRYMLKVNKIDVEV* # PASA_UPDATE: g2469.t1, single gene model update, valid-1, status:[pasa:asmbl_5869,status:12], valid-1 NODE_32_length_57444_cov_22.58_potentialcontaminant . gene 20915 21824 . - . ID=g2469;Name=g2469.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . mRNA 20915 21824 . - . ID=g2469.t1;Parent=g2469;Name=g2469.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . five_prime_UTR 21755 21824 . - . ID=g2469.t1.utr5p1;Parent=g2469.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . exon 20915 21824 . - . ID=g2469.t1.exon1;Parent=g2469.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . CDS 20915 21754 . - 0 ID=cds.g2469.t1;Parent=g2469.t1 #PROT g2469.t1 g2469 MKTLVIVFDEDIASVGAEMLQQLLEQEKFAIDAKSANLKLKINASFANSNSNIDSHFAELKLNIDSTTDSKRQIDVTKRQIDAALNDTKRKIADMSESSFHILHIGSNGIDTFNHGPVPYEHLKAIVIVGDPMLRSRSAYTPKLIRLFGDVSGDGDGNLPVVILSDVFRHTRKYYDDVKRNYGSRVDLSCLHGIGYERLLRVLGDVRGASDRFGVSRYFYFRMELEQAQLEREQAQLEREQAQLEREQARLERAEMNRKLEQICAFLNFGYSDDAEKTQ* # ORIGINAL: g2479.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 44936 45349 . + . ID=g2479;Name=g2479.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 44936 45349 . + . ID=g2479.t1;Parent=g2479;Name=g2479.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 44936 45349 . + . ID=g2479.t1.exon1;Parent=g2479.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 44936 45349 . + 0 ID=cds.g2479.t1;Parent=g2479.t1 #PROT g2479.t1 g2479 MLLDWGYPDVIPDRIPVKISSEILTLVIEFCTHHIDDPVETEPKMWGKWVIPDPVNSSVNEWDAAFMQKMSVDTLVQTVNAADFLELKDLLDAGGKAIANLLNRKTPEQIREMLGLQDDFTPEEREQIRLENEWCEP* # ORIGINAL: g2474.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 36654 37217 . - . ID=g2474;Name=g2474.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 36654 37217 . - . ID=g2474.t1;Parent=g2474;Name=g2474.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 36654 37217 . - . ID=g2474.t1.exon1;Parent=g2474.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 36654 37217 . - 0 ID=cds.g2474.t1;Parent=g2474.t1 #PROT g2474.t1 g2474 MQKVFVLGNSNVGKTSLINAYMNSSGTRRPAYMNSLGTRRPAYMNSRGTRRPAYPTQIADFYDIGVNNGKLTTLWEIAGSVQHCLARKFLNNVASVIFVFDVTCSQSFRDIESWISLIENVHDPPIHRFLFANKCDLQSGRQVFYDEIKEFAAWHELPFFETSAWNYSECVAAFDHVQHNTNVDYAN* # ORIGINAL: g2472.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 28360 29019 . + . ID=g2472;Name=g2472.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 28360 29019 . + . ID=g2472.t1;Parent=g2472;Name=g2472.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 28360 29019 . + . ID=g2472.t1.exon1;Parent=g2472.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 28360 29019 . + 0 ID=cds.g2472.t1;Parent=g2472.t1 #PROT g2472.t1 g2472 MDNEVDFRALLAELRTEIGGEIRKALAEQSCSNCKELRWVLAKKDDEIEELRLALVKKDDEIEELRTALAKKDDEIEELRTALAKKDDEIEELRTALAKKDDEIEKLRSALAKQNDVIEKQNDEIEKLRSALAKQNDVIEKQNDVIKKKDVENEQLRGDIKDLKEDMHSSIKKEVNRQMDSMRLELERLRLVSNDVDLVELFFERLRPQTCSQQAANWI* # ORIGINAL: g2480.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 46157 46660 . - . ID=g2480;Name=g2480.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 46157 46660 . - . ID=g2480.t1;Parent=g2480;Name=g2480.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 46157 46660 . - . ID=g2480.t1.exon1;Parent=g2480.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 46157 46660 . - 0 ID=cds.g2480.t1;Parent=g2480.t1 #PROT g2480.t1 g2480 MKLTLSYVALDYDAELAQAISGTTLDATYGLPDGQSIVVNAERFKVQEALFQPQLFQLSGASVQDLISTSILKVDADIRKDMIGTIILSGDMDYPGMSERLAKEVKASLAQVGITTLPVNVYQNQDANFASWIGGRDFATDDSTLGQWITSANYAQCGPSIINKSCI* # ORIGINAL: g2475.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 37292 40087 . + . ID=g2475;Name=g2475.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 37292 40087 . + . ID=g2475.t1;Parent=g2475;Name=g2475.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 37292 40087 . + . ID=g2475.t1.exon1;Parent=g2475.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 37292 40087 . + 0 ID=cds.g2475.t1;Parent=g2475.t1 #PROT g2475.t1 g2475 MRAEYGGCIYIDNKAVVELRSSFVDNVHVNVYGSIIALSMANVLIENTEFNNLFALGGGLVYISGSASLIVTGCRVSNVYASLDGGVAFLSAGARVELSNTTFNNVATGGNGGFAFLEVHATLAMEQCVITNASAVKSGGAIYARGASSVTITLMQFFAIACGRRGGTISAVEYANIGLYESTLELSTAGNVLELSTGNALTQSNDKYLSSYTESSGGAISVEDSVRIIVANVTASRVFAAGAGGFLAAIGNGGVSATVTDTSVTNARAHLGGGFIVGLGATLSLFGVSVNTAVANADGGCVYVAAGSTIVFGGSSLQNCFAGAIRSTFGAGGAVFLGPNIYGGILSPTYAINVSAVLGPGIYSYGLLPASVLSLASVSNEIPIDKTELPSNWESGGLLVGAVSRLTSSVQAITVRSGASLPTFVMEIRDVYGGRVSLPADQNLAIRVVVVEEYLAGAYLVGDVEKNFATGASVKFTELRLFALPGDYILRAESSNPFLYGDLDPNENRRRFLQTFRFNVTVSNCVMALKPLDGDVSKMAWQCTSEEDSGIVRLVVPSVVGSLVTLVVIVVIVRWRWLVSRRAQSQMAQAEFVRKHAAELEGLVRFEVARNLIELLERIGEGEFGIVMKARLFLNDRARLCAAKTLKEGATYSERVAFVEEAQILAELSHPNIISLCGVITVDEPMYLLFEFAVHGDLRTFVMAITGDRRTAVATGAMLTNFAFQVARGMSYLASVNIVHRDLAARNCLVSQDAFGEYIVKIADFGLSKAKSTEYYRNRGGKERLPYRWMAPEAMLTLRFTEMTDVWSFGVCVWEMFSFGAVPYGGIPSGEILHHVTSGNRLEFAPRICGLALRTIVANCWAKEPKSRPSFEEIDRLSTIPVNTPSNRRTSVVPVIAMISRRQATYLNLAGISTINEGYTNVELELAEVSV* # ORIGINAL: g2484.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 56838 57347 . + . ID=g2484;Name=g2484.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 56838 57347 . + . ID=g2484.t1;Parent=g2484;Name=g2484.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 56838 57347 . + . ID=g2484.t1.exon1;Parent=g2484.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 56838 57347 . + 0 ID=cds.g2484.t1;Parent=g2484.t1 #PROT g2484.t1 g2484 MPKNTIIGILESISPRALREFIPLVRDFLPTASGKAARARSSPAATVNRKFNQLTEQTQKRAYSILHRNHALLIHPAIHVDAFQDVDDAAVAFEQRFRAIQNVAGLEFQNRIDLGNFVLAKLELMSTANPIERDENVAAFIRDSVGIDVTAADCVSYKKLALLQRKYQG* # ORIGINAL: g2470.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 23381 23635 . - . ID=g2470;Name=g2470.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 23381 23635 . - . ID=g2470.t1;Parent=g2470;Name=g2470.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 23381 23635 . - . ID=g2470.t1.exon1;Parent=g2470.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 23381 23635 . - 0 ID=cds.g2470.t1;Parent=g2470.t1 #PROT g2470.t1 g2470 MSTQWSAGTTSNYTGIVEIYEAPMIMELPFYNTLAEKDATIAKLREDLFRKDATIAAKLDMKVKNLCENIQPYSGKAGYAPTFG* # ORIGINAL: g2483.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 55350 56800 . - . ID=g2483;Name=g2483.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 55350 56800 . - . ID=g2483.t1;Parent=g2483;Name=g2483.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 56741 56800 . - . ID=g2483.t1.exon1;Parent=g2483.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 56741 56800 . - 0 ID=cds.g2483.t1;Parent=g2483.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 55350 56495 . - . ID=g2483.t1.exon2;Parent=g2483.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 55350 56495 . - 0 ID=cds.g2483.t1;Parent=g2483.t1 #PROT g2483.t1 g2483 MSLRLTAPLVASSTTTFIFVEQSENYLVVSVCSIDCWNKRIEYNFKPWWRGGPCRIVLYVNCDVHPTLRLFERIYPSLVAAGVPLRVDPRTVRAKHVSDALEACGKYLLLLVDEFECVFKADNPVASHAGVGTVFDLISFCSESAGRVAPILCGSSSLMQLVTSREDVHLCVRFPLLRRVVSMNGTKFHAMPLIYNVATDLAAFDELAPDATLADRRVLAFFVGTNVRLFVKVREEARDIRARLDAGERFEAAVQCFQSVLPPSSEQDAALDTALGDFLASLFRAFRTANEALFDAVIDLDSKRVVLKRIGELEWESFKPLSFQEVVRIHDTLPNRRPGTKALSDWRFLVDRGWFGERNECLYPSRFIDVVAFAVKGEAGGFPLNQDDDGFDIVLKILAGK* # ORIGINAL: g2471.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 24660 25835 . - . ID=g2471;Name=g2471.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 24660 25835 . - . ID=g2471.t1;Parent=g2471;Name=g2471.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 24660 25835 . - . ID=g2471.t1.exon1;Parent=g2471.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 24660 25835 . - 0 ID=cds.g2471.t1;Parent=g2471.t1 #PROT g2471.t1 g2471 MAIYMSGWSLPAHEQDIYKSAFETMAATAAADQECEKKPANILPLRLLTTGSATNSDRELSAKFYKFIRELGARTIVHTDTPYEAKIYSVSIMREITDRETVRNPEFERFEEQMNILTQADVDAKELAKMAKTAPPKCITIEKTKTSVSVNLINEKSKPLDTLYIRKLDMLRLKSSLECFAQKKSSLVRLGLPNKLGVLLYGEPGTGKTSAIFAIATHLRKNIYYVHLNTVQSNEELQTIFDHVNKNCANGGIIVFEDIDAMTDVVHKRTADRQQTKFTLEYLLNLLQGTLTQDGSIFVATTNHLEQLDPAFYRDGRFDIRIELQKCDHYQLQTIYEQLMGRGIPQHMLNQIPEDEFTPATFIFGIRTYMFGDYSDDEVLSAFRRTPRGSF* # ORIGINAL: g2476.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 41557 42588 . + . ID=g2476;Name=g2476.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 41557 42588 . + . ID=g2476.t1;Parent=g2476;Name=g2476.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 41557 42588 . + . ID=g2476.t1.exon1;Parent=g2476.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 41557 42588 . + 0 ID=cds.g2476.t1;Parent=g2476.t1 #PROT g2476.t1 g2476 MADSERDNFTQCVESFFVMQGIAEAVANICDRDSGESGSEPLACIGYTLVNVSPTKGHEDVKDGCDVDDLDEEEETDEENEEGEEGEEGEEGEEGEEDEEEEEKAHDNESDGFLDDVVKRRPWEAVAKVRAMVARGRPFFCEGILQSIDTSFKMDVLSTTGEWNSVTVDPSGLSALLAASHQAAFGDLKTMETVVDGSVRTALEISPDQFRIDGETLNAITSEIAGEFEATLMEGLVPVTVKPYKINIYSKGSFFKSHVDSPVGDDMIGTAIVSLPFKHSGGGLKVSHRGVETTFNSGAESYKWCAFFSDCPHEVLKVNSGHRVTLTFIVSAAHTTPQRRQQR* # ORIGINAL: g2466.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 16118 17746 . - . ID=g2466;Name=g2466.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 16118 17746 . - . ID=g2466.t1;Parent=g2466;Name=g2466.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 16118 17746 . - . ID=g2466.t1.exon1;Parent=g2466.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 16118 17746 . - 0 ID=cds.g2466.t1;Parent=g2466.t1 #PROT g2466.t1 g2466 MATMDDLKKQLEDLKLRFEEAEAASAERLRIAEAEKERAIAEAERLRAAEAEAEAASAERVRIAEAEKERAIAEVERLRAAEASIRSIINDGLPEIADRPMSTTTSAVRENHPPVEASILSTFGILQDLPLRHLDSRIWRTYESSADKLNWQNEFTLRYFIEEVLGDVIAAMGVKGICYHRELDSFSPNRPDLLVVAIDFVPVGIIEFKCPNRDDKTSCLDDLSVLGQVFDEMYYTRSLYNIKYMFGIVTTYNEWRFCWLDEEASAFAASTNVRTDDASTSGDAPRDSAPLCAAGETWDEFDASKDAQTDVESVVVPVERKIYVSKIFERKDPSLVRAIASVLWKMNTAPQTVVRPLTSKDKTYVLLDKASMKFVREKTLSIKNLKAHLPRQDCSYYLLLRDLRGGAHGRVWLACSTSGSLCVLKLPVDEETLKREYEVWNKTFPQGGARIETLYGRRMLLMPFLRPCPRDASMKKAVKKAVRRFANAGFEHLDLDTDWRHVGLYKASEKASACVTLFDFGAVSHNNTPNVSYAKMCKKLGL* # ORIGINAL: g2477.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 42645 43184 . + . ID=g2477;Name=g2477.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 42645 43184 . + . ID=g2477.t1;Parent=g2477;Name=g2477.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 42645 43184 . + . ID=g2477.t1.exon1;Parent=g2477.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 42645 43184 . + 0 ID=cds.g2477.t1;Parent=g2477.t1 #PROT g2477.t1 g2477 MGTAGRGIAALVNLSKKSLPYSAVGFLLGHRYTMTALANADGCLKGVDMLLYNAVRDTGLRAEFITVVQLQYHSLYSTVSSGCGSDSDTYTNRVYALTPSDLDFLTNKTSVKPTYKYKHVPFYDELTSYDLNGYDLKKKSKMLLHYDGGSEHTGNEAAPCVKQGVYFRAAMIVSAMQSE* # PASA_UPDATE: g2467.t1, single gene model update, valid-1, status:[pasa:asmbl_5868,status:3], valid-1 NODE_32_length_57444_cov_22.58_potentialcontaminant . gene 18147 19692 . + . ID=g2467;Name=g2467.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . mRNA 18147 19692 . + . ID=g2467.t1;Parent=g2467;Name=g2467.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . five_prime_UTR 18147 18673 . + . ID=g2467.t1.utr5p1;Parent=g2467.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . exon 18147 19692 . + . ID=g2467.t1.exon1;Parent=g2467.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . CDS 18674 19675 . + 0 ID=cds.g2467.t1;Parent=g2467.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant . three_prime_UTR 19676 19692 . + . ID=g2467.t1.utr3p1;Parent=g2467.t1 #PROT g2467.t1 g2467 MIWTFLGTKRNLTWMTEADVQFLVQCVISDAAEAVGISIHTYQEINVDRIKGDIWVVARDRIPIGVIEVKCPTTRNAHNDTHVYGQLFNYMARLRALHNVRHVFGILTTYDKWRVCWLDALGDDKIEEYAASTDIPPQPARLSATDMVARISSIVSQLSATDYSIDDDDNGDDNGDDNNTGAATSSDTAESSNAAISRNLNISPVYTWNDKDLPTILASTIVKMAYSPREDDRALVAPGRAYSIVSNHPPTFEKCDSLALKWKMPNPSCKTFILLKDLHGGAHGRVYLACSKGGHVCVLKFPVAGLLSALFALYLTAADVTAIGGVHTLILTN* # ORIGINAL: g2463.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 8459 12001 . - . ID=g2463;Name=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 8459 12001 . - . ID=g2463.t1;Parent=g2463;Name=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 10793 12001 . - . ID=g2463.t1.exon1;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 10793 12001 . - 0 ID=cds.g2463.t1;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 10475 10654 . - . ID=g2463.t1.exon2;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 10475 10654 . - 0 ID=cds.g2463.t1;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 10189 10382 . - . ID=g2463.t1.exon3;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 10189 10382 . - 0 ID=cds.g2463.t1;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 8459 10106 . - . ID=g2463.t1.exon4;Parent=g2463.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 8459 10106 . - 1 ID=cds.g2463.t1;Parent=g2463.t1 #PROT g2463.t1 g2463 MKTRSKSRRPASRRVAGAALGHADPTKDDPDSAGNTGKRNGSGKGKSNGQGRTAKVATAVARSADAGKAPIATRKATGKGKGKGKGKNKRKAKRADSDASASDSEMAIDAVGDGDGGGPSSGGPSASRKRKNTNPMPPAKKRKVVAAASAVGYSSADVDESLAPDDVARLVALVTPAQPAPAPRGKKGKALADRLVRAPVASARIAALPSNLLVEVAVDGMCVDCCAACACRKAFGLVRNGDIAGLKIMIEDKKHVASINARAGPNVFTTPHDLALRSGNVELLKCFRDGLKVGGRTAFPSNTIKEDNNTGHVGHHTYNHRVAKINVGRGGREGNVAFVDWPREDPFDCSAGRDDAKEAAVVRCLNGAPGMADVIADYDMVDGGNAYVRTTGIFRACEAGQRELATKLLATADSSWGFNHVHEEALTLGQGEPFTEFKSVQAAKRAVGNQSITPLHMAAINPNDSVLAALLSVAKEGSETVAGSMGRTTAHFAAACVGDGPLRLLHSLDKNINTPDKSGVTPLHMCARFGRAINVAVFVEANAGTLSTSKADKKGRTAVQYAAHYGHPGTLAALIAAGAPFDVPDRDGKITPLMEAARSGHRACAEILIAAGADPEALDKAQRTALHHAAKNGSARTLALLLSVGCNPNAADSSGNVPLHYAAAYGWDGCMRILVAGGARPGELSSWKVGPLFVAMIKGHMRCVETLMTMDGVDVNQRDAEGQTMLHHVMRSTPADAQRRVEYLLKNGASVVIANAKGRTPLHVLMSRRYADDDVETVTATLQMLLAAGADPCAADSEGATPLSLVLKYEALPLFVALVEAGALAKLPTTPQDGKNILHQVVGVKLGMRWLETIIAGVDGSVLKRMAREYDAEGLTPLLRYLAVPTHTHGSAALSFSQGKLMGDFLEALCAATDPDLEAPARPPASTGKLGCTALHFAAFGKGVKTDEVTIAVDFLVSKGASILARNAQGATPLHSLIFGKHSLPSQTVRSLCADPFVLAITDASGGTPLICAARRNLADLVHNLIECGAGATINAQDKDGITGKTSYSLPGTDRRATTVRVFSGCLLGCFGSYEV* # ORIGINAL: g2462.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 4681 8349 . - . ID=g2462;Name=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 4681 8349 . - . ID=g2462.t1;Parent=g2462;Name=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 5677 8349 . - . ID=g2462.t1.exon1;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 5677 8349 . - 0 ID=cds.g2462.t1;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 5528 5601 . - . ID=g2462.t1.exon2;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 5528 5601 . - 0 ID=cds.g2462.t1;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 5206 5428 . - . ID=g2462.t1.exon3;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 5206 5428 . - 1 ID=cds.g2462.t1;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 4681 5088 . - . ID=g2462.t1.exon4;Parent=g2462.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 4681 5088 . - 0 ID=cds.g2462.t1;Parent=g2462.t1 #PROT g2462.t1 g2462 MLATLCFGGESQATPLVTVLLEAGASANPLPSYDGPNAPILIAASRSNVNAVKALVRGGADPNVAVRAWTPTPNGLSNNAGSLVEGSTALHLLISKSMASKDRLAIADAVRFLVEAGAKTCLRDANGRTPLHTCFGEVSFVSVGATSQWGGFYRQQPPTDTDPISIVSDYCPVPGVDVNAPDANGRTPLHYAAASNALITAMYLLQRGANVNAKDHFGNGPLQIAILRRHKEMAAVLVSRGAVVGATLLDGASMSTFKAAAMANMDALCYLMIGGGIDIITACDDCLSIGMPQLMRTLLSKSSNEQLLGTTPDGRGLFHILASHAVRDANERNILIATLDERHVPVNVRDSRGDSPLHVAAASCNEALAMHLVRRGLKADEPDGSGNGALARVPSLMNNDLVEFFVKKCGVDPNSAIALGGVPLLHIAVEQNNVEVIDILLTGGADKNARHPVTGRTPIAECARLNKGEAARAILAHVSKNADALTEVRLDLADSDGKNALHHCVAGESSFVSSENVALLEAILGAHLGDAAIAKDANGLTPFQYAARQASGVMLAALRRAIPSVEHTDVQPHDERVYPLLGESPVAIEPGTDAVEMRRVHSAEADAAWEKKRQAGLVAHRVDDAGGFPDAAVVHVGENGVAYDVMLHKVDVAYGSHGKNDFYRMQVIHVTTQDLFLLWTRWGRVGETGMHQKTPYPSKTDAETEFCKVFRAKTGNAFDSSPFDPKPGKYRLQLATRSDPGDAIAKFDRNALTIPTALDVRVANFLRIILNTKLITQAFKRKRVFDGMLGRVPDGAVAEAFSALADIATCAAELTEAESTTDVARIKAARDRMDPVLNRFFELIPHGVQSQMSIADVNDKIRLLVEISDMQVAARLHLGAQLRQTTMNPMEYCYRALGTRMTPIEPNTDEYATINRYFVTTSEGSEDLSIESIFSVSRPGEAEAFATHAHVGNHMLLWHGSGLENILGILADGLCIAPVHAKLTGSMFGKGIYFADAFVKSRGYCSMGSYGSVRARNHCVAFLCRVAVGTSKVGEHCSSSEQRAANHAARFHSTFGPGYKQPDPTKAIVIASTGVKIPMGPLVRPDHPNLMLSYNEYVVYDPTQVCIEYAVLLKNKGWTKTPKAT* # ORIGINAL: g2478.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 44161 44373 . - . ID=g2478;Name=g2478.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 44161 44373 . - . ID=g2478.t1;Parent=g2478;Name=g2478.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 44161 44373 . - . ID=g2478.t1.exon1;Parent=g2478.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 44161 44373 . - 0 ID=cds.g2478.t1;Parent=g2478.t1 #PROT g2478.t1 g2478 MSPDIQNEIRYVLYVREFFGYLQLASQHSKADDGEEKEDDDNEENEDDDNEENDEDDDDEDDEDADALKR* # ORIGINAL: g2481.t1 original gene structure, not modified by PASA NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS gene 46758 47228 . - . ID=g2481;Name=g2481.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS mRNA 46758 47228 . - . ID=g2481.t1;Parent=g2481;Name=g2481.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS exon 46758 47228 . - . ID=g2481.t1.exon1;Parent=g2481.t1 NODE_32_length_57444_cov_22.58_potentialcontaminant AUGUSTUS CDS 46758 47228 . - 0 ID=cds.g2481.t1;Parent=g2481.t1 #PROT g2481.t1 g2481 MIVTGFAGDEPPSTVIPAVIGTPTANAAITLKDQYIGNEALKKRPLLQLKYPIVNSVVTDTTVASKLLKSTIDTVSGAGRPLMMIASPLTTAAQKEDLTKMAFETLGVSAFFLMPAPILALMNNERATGLVVHMDSTAIVVTPVYEGYILPRNRPE* # ORIGINAL: g3102.t1 original gene structure, not modified by PASA NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS gene 228 1079 . + . ID=g3102;Name=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS mRNA 228 1079 . + . ID=g3102.t1;Parent=g3102;Name=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS exon 228 332 . + . ID=g3102.t1.exon1;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS CDS 228 332 . + 0 ID=cds.g3102.t1;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS exon 524 655 . + . ID=g3102.t1.exon2;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS CDS 524 655 . + 0 ID=cds.g3102.t1;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS exon 851 903 . + . ID=g3102.t1.exon3;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS CDS 851 903 . + 0 ID=cds.g3102.t1;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS exon 1064 1079 . + . ID=g3102.t1.exon4;Parent=g3102.t1 NODE_4497_length_1539_cov_36.0198_potentialcontaminant AUGUSTUS CDS 1064 1079 . + 1 ID=cds.g3102.t1;Parent=g3102.t1 #PROT g3102.t1 g3102 VLRDLLEKGTTLLELRLRENPLGAKPCLEMLKGLSVNSRLSVLDLRGTQLKDQFLVALGQIFAMGASAIADIDLGDNEGLTDDGFKKLLDGLPRAKSLGVV* # ORIGINAL: g12333.t1 original gene structure, not modified by PASA NODE_2293_length_6828_cov_44.2964 AUGUSTUS gene 3277 6465 . + . ID=g12333;Name=g12333.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS mRNA 3277 6465 . + . ID=g12333.t1;Parent=g12333;Name=g12333.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS exon 3277 6465 . + . ID=g12333.t1.exon1;Parent=g12333.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS CDS 3277 6465 . + 0 ID=cds.g12333.t1;Parent=g12333.t1 #PROT g12333.t1 g12333 MNTTGLLPARLAGIEGSDFNMRGAENIMTLIDFKELLCQRHPNTYTESDLPFLSASYKSADGSHKRLPAHFDGRSLLQFCETEGVSTVNPLVIAVVNVNHRIRPRDVDGEAPEPRRVRPRTDDKGPHDTKSALNRRTVNVHTDDVHECAESNSSTPTTAAAAAGSAEAGVDRRGKGRATDQSDGASAGDNILLGHFIPLEHRRSEGLDALPVSLRLFSEGFRNDPTCKLLVCRIYKMLVYDNPLYWPLRGVLVRNDLAQTPINNILYGRTQQGKTQAIATLAFIAAIGLGVLSIVTVRSTGGQMTYARLKEDIEAIAEHARRRLKEDISAESGNLSHDLQRTITTFFDPQIAWAIDLKRAEPVVLGDRSRPIVIIARNSKPIIDCLFQSRSMGWNVATEIAKVPRTQSEPIPYAIFSDEDDNSVSSSDRNHTQIEVALHQQPVASFMQTQQFVRGDIPSVQSPSLSDTPRPQSEENWDVLRDDSELSPPPSCSDEELNDDEDDEPADIRTVRNSSQLHVCISATWFATATLESESHTEERLRIIELPMTSAYKRINMALSPPTRLQAGSDEEEGGVDGVADVDMDASAVPLLHNTPFVRIIEMDNIPASLKGEDKKVFVNHPGWSPFTSTLTASYDTAKENWVAVRPRDNPYPDCREQPEVAKRTPPRHVSALISTGATRNTKFQSDQAAMLHTDPHLRGSMMTTFAFNMQATASFFFSRRLTDLIPQFEVLVRAVLHDTFFDNTDRAEAMMASIINRAFDPASVANTSRPNCTVEFSRDYVRVSVEKIEKSKRLLEKYYDIIYAVYMYARIPPFVVCVAGICANRQATFKDSRHRFVLTDMFVDLPRCSHIELAIQMTGRICSTDAYDLIPRRLFLDTAGVTLLRDGLAMYDEFISLCKAHNQPVTFANLIRAVGPEHRCIAAVFRSDAKVTKARTHKYAKELTSYMLRADQTQFEAIAEWWGNSALASHALKADDIHREMQAMGLVRMYDTPETRASCFNEAATTRRPLLIMARLDDQRVERSATSSIHGALHAGKHAGRVEGNGQNGWRLVSQPPPVVC* # ORIGINAL: g12332.t1 original gene structure, not modified by PASA NODE_2293_length_6828_cov_44.2964 AUGUSTUS gene 427 1584 . + . ID=g12332;Name=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS mRNA 427 1584 . + . ID=g12332.t1;Parent=g12332;Name=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS exon 427 774 . + . ID=g12332.t1.exon1;Parent=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS CDS 427 774 . + 0 ID=cds.g12332.t1;Parent=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS exon 965 1317 . + . ID=g12332.t1.exon2;Parent=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS CDS 965 1317 . + 0 ID=cds.g12332.t1;Parent=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS exon 1419 1584 . + . ID=g12332.t1.exon3;Parent=g12332.t1 NODE_2293_length_6828_cov_44.2964 AUGUSTUS CDS 1419 1584 . + 1 ID=cds.g12332.t1;Parent=g12332.t1 #PROT g12332.t1 g12332 MAGGIRIKPITPAAIALQQHQYPQHQQQQQHPAGATVTQHTAIRNSSTSHGRVHHSHASTHKHAESHGMRLVLPDGFGEKKGPVRICILSGWAFSEHKYVAKYSQLYKDMGYAVIQLESGSPNIFDHSALQKRLRGALEVADVLASSASPRDSASASSASVSRLDHCSLTFHSFSNGGLSLYMQFLRESELKSTRAADWAQILTHAVLDSCPAPLTMQTLGLAMTEHIRNRIARKTAYYALRTLTLGLAFTPYALRSWRDAKFGIPLLAKSTAHARVPVMLMYSDGDM* # ORIGINAL: g8087.t1 original gene structure, not modified by PASA NODE_1899_length_8667_cov_39.3745 AUGUSTUS gene 3395 4294 . + . ID=g8087;Name=g8087.t1 NODE_1899_length_8667_cov_39.3745 AUGUSTUS mRNA 3395 4294 . + . ID=g8087.t1;Parent=g8087;Name=g8087.t1 NODE_1899_length_8667_cov_39.3745 AUGUSTUS exon 3395 4294 . + . ID=g8087.t1.exon1;Parent=g8087.t1 NODE_1899_length_8667_cov_39.3745 AUGUSTUS CDS 3395 4294 . + 0 ID=cds.g8087.t1;Parent=g8087.t1 #PROT g8087.t1 g8087 MDTFDVHKKQALASLEGSEDRSKKGSVDAPIATLVARINSHPDFVTTSSCSGRIAAYREADGVRKFGGEWITVSHDPIDPDSFVSDMMVAEASGRLGIPTSTTTTTSAMNVDAVEESGDSEAGDAGSSSERADGGVPTVFRFEPFVLHCECRSVEHAQGLFQVALASGYKQSGIVLGKRAIVAVRSTLKLEVPIAFNGKLLVGPDYLRFIAVMANDKMRENVERINRFETELVAFLDGAGVKTTKAQRRKLREPHHGQQKGRIAQNAAESEADSSAAESVARTTAVDDFAGSFPWGDCD* # PASA_UPDATE: g8089.t1, single gene model update, valid-1, status:[pasa:asmbl_2946,status:12], valid-1 NODE_1899_length_8667_cov_39.3745 . gene 7089 8484 . + . ID=g8089;Name=g8089.t1 NODE_1899_length_8667_cov_39.3745 . mRNA 7089 8484 . + . ID=g8089.t1;Parent=g8089;Name=g8089.t1 NODE_1899_length_8667_cov_39.3745 . five_prime_UTR 7089 7312 . + . ID=g8089.t1.utr5p1;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . exon 7089 7571 . + . ID=g8089.t1.exon1;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . CDS 7313 7571 . + 0 ID=cds.g8089.t1;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . exon 7704 7954 . + . ID=g8089.t1.exon2;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . CDS 7704 7954 . + 2 ID=cds.g8089.t1;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . exon 8147 8484 . + . ID=g8089.t1.exon3;Parent=g8089.t1 NODE_1899_length_8667_cov_39.3745 . CDS 8147 8484 . + 0 ID=cds.g8089.t1;Parent=g8089.t1;3_prime_partial=true #PROT g8089.t1 g8089 MDRRVLGATASGTSLASGSSGGLGAPTEALPAGPLTGPQYQLPPTLSTRFRVFTGWINFRLWRRNLTVGNVLRDTCGKGILGALLDEVLGDKQLLRPERSDSFSQRIRRVENCALVLEQHGLVRSGHIDAQRVVEGSEVDVLELLWIFIAEDIRQCWRFFGLDAHHEQKKEEAENAKALVSQSQQSAHGPGDSTTAVPSSTIGSDSNGQLNQHIFTGQLLPPVTDKRGPQMMRVLAADGVSGSIAPSALTTAAPSPVLGMRPGSPASGVGVTSPTKRRSKGR # PASA_UPDATE: g8085.t1, single gene model update, valid-1, status:[pasa:asmbl_2945,status:12], valid-1 NODE_1899_length_8667_cov_39.3745 . gene 55 1219 . + . ID=g8085;Name=g8085.t1 NODE_1899_length_8667_cov_39.3745 . mRNA 55 1219 . + . ID=g8085.t1;Parent=g8085;Name=g8085.t1 NODE_1899_length_8667_cov_39.3745 . five_prime_UTR 55 55 . + . ID=g8085.t1.utr5p1;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . exon 55 192 . + . ID=g8085.t1.exon1;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . CDS 56 192 . + 0 ID=cds.g8085.t1;Parent=g8085.t1;5_prime_partial=true NODE_1899_length_8667_cov_39.3745 . exon 400 529 . + . ID=g8085.t1.exon2;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . CDS 400 529 . + 1 ID=cds.g8085.t1;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . exon 889 1219 . + . ID=g8085.t1.exon3;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . CDS 889 1041 . + 0 ID=cds.g8085.t1;Parent=g8085.t1 NODE_1899_length_8667_cov_39.3745 . three_prime_UTR 1042 1219 . + . ID=g8085.t1.utr3p1;Parent=g8085.t1 #PROT g8085.t1 g8085 HRGITRIRGTNYKSPHGIPIDLLDRLLIISTTPYSEKEISQILKIRCEEEDVEMMDDAIEILTKIGTETSLRYSIQLITASNLVSRKRKGTEVSVDDIKRVYSLFLDESRSTQFLKEYQQEFMFNEMGGVDTDIVMKDT* # PASA_UPDATE: g8088.t1, single gene model update, valid-1, status:[pasa:asmbl_2944,status:12], valid-1 NODE_1899_length_8667_cov_39.3745 . gene 4413 6694 . - . ID=g8088;Name=g8088.t1 NODE_1899_length_8667_cov_39.3745 . mRNA 4413 6694 . - . ID=g8088.t1;Parent=g8088;Name=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 6557 6694 . - . ID=g8088.t1.exon1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 6557 6694 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 6343 6456 . - . ID=g8088.t1.exon2;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 6343 6456 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 6045 6247 . - . ID=g8088.t1.exon3;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 6045 6247 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 5739 5913 . - . ID=g8088.t1.exon4;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 5739 5913 . - 1 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 5449 5655 . - . ID=g8088.t1.exon5;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 5449 5655 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 5098 5217 . - . ID=g8088.t1.exon6;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 5098 5217 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . exon 4413 4813 . - . ID=g8088.t1.exon7;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . CDS 4433 4813 . - 0 ID=cds.g8088.t1;Parent=g8088.t1 NODE_1899_length_8667_cov_39.3745 . three_prime_UTR 4413 4432 . - . ID=g8088.t1.utr3p1;Parent=g8088.t1 #PROT g8088.t1 g8088 MVQYVVVGGGISGVTCAEALSGLCPHDAVVLVSSTPLVKQIVNFKKLSRNLEEFDIVEKKLDSTNYPNVTIRQHHVAAIDTTSQDVVCTDGTRIHYDKLCVCSGARPRVICEGNPFVIGLRDTESALDLQERLSGARKVLIVGNGGIALELAHKIRECDVVWAIRDDTIGNTFLDAGAAQFLIDEAMSARQECAGSAFVPSTVDGRSVVAWHAGLDLRGSTGGTLHVEKSCEVVAIDLCNEPFPAFPVRAALTGGVVVECDFVVSATGVQPNTEFCGSEFAKSADGGLSVDKSFCTSVPHVYAAGDACSTEWDNEHWFQMRLWPQARQMGRAAAMSMSGGDPTVDFSFELFAHATTFFGRKVILLGRFNGQGVDGPTEALVRVTRGQEYVKCVMTPTDGRMRGAMLVGDTDLEETFENLILNGMDLSMFGERLLDPDIDIEDYFD* # PASA_UPDATE: g8086.t1, single gene model update, valid-1, status:[pasa:asmbl_2943,status:12], valid-1 NODE_1899_length_8667_cov_39.3745 . gene 1387 3053 . - . ID=g8086;Name=g8086.t1 NODE_1899_length_8667_cov_39.3745 . mRNA 1387 3053 . - . ID=g8086.t1;Parent=g8086;Name=g8086.t1 NODE_1899_length_8667_cov_39.3745 . five_prime_UTR 3008 3053 . - . ID=g8086.t1.utr5p1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . exon 2995 3053 . - . ID=g8086.t1.exon1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . CDS 2995 3007 . - 0 ID=cds.g8086.t1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . exon 2396 2602 . - . ID=g8086.t1.exon2;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . CDS 2396 2602 . - 2 ID=cds.g8086.t1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . exon 2195 2266 . - . ID=g8086.t1.exon3;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . CDS 2195 2266 . - 2 ID=cds.g8086.t1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . exon 1808 1849 . - . ID=g8086.t1.exon4;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . CDS 1808 1849 . - 2 ID=cds.g8086.t1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . exon 1387 1637 . - . ID=g8086.t1.exon5;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . CDS 1555 1637 . - 2 ID=cds.g8086.t1;Parent=g8086.t1 NODE_1899_length_8667_cov_39.3745 . three_prime_UTR 1387 1554 . - . ID=g8086.t1.utr3p1;Parent=g8086.t1 #PROT g8086.t1 g8086 MAQRVAASGGKFYITVALPVGAVMNCADNTGGKNLYVISVKGIKGRLNRLPAAAIGDMVMATVKKGKPELRKKVMPAIVIRQRKAFRRKDGVFLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAPSIA* # ORIGINAL: g2214.t1 original gene structure, not modified by PASA NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS gene 875 1426 . - . ID=g2214;Name=g2214.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS mRNA 875 1426 . - . ID=g2214.t1;Parent=g2214;Name=g2214.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 875 1426 . - . ID=g2214.t1.exon1;Parent=g2214.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 875 1426 . - 0 ID=cds.g2214.t1;Parent=g2214.t1 #PROT g2214.t1 g2214 MTCDDCGRGWCYLCRRKVVPTGYEAVSANYASRAVAEKKAVYDANFGELRTLADVERCWTAVAPAEIRVDRKGQATMWAHHTHVTASICSAYGPATKPHCPLYLSMYAYLPIALPALDGAGETTAIRRHNAAVRAYRTAVCHVEKKRRRATKAGAHIYFDDENNLPMGDAPTFRPSPASIQHC* # ORIGINAL: g2215.t1 original gene structure, not modified by PASA NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS gene 1440 3341 . - . ID=g2215;Name=g2215.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS mRNA 1440 3341 . - . ID=g2215.t1;Parent=g2215;Name=g2215.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 1440 3341 . - . ID=g2215.t1.exon1;Parent=g2215.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 1440 3341 . - 0 ID=cds.g2215.t1;Parent=g2215.t1 #PROT g2215.t1 g2215 MSNRIILKRKSVDEQQDIISDHTEELATAASVPAAIQHKAKHRRFRDSVTADAQKRLKFIAAESGPSRCTPDQAIPCIRTDFNPPDALPDGRELHQFNPTGASVHLNASKSHSDAQDNRDWIPMDTCGAFNTVDQPALSDTVLRSIAAAAAAVPPVPEVTHSHVSRRVDMESVRAGDEQEAKELSAAEEFIFSPLIGRRPTVIYQFDRVKRPRIGRSAALRVINRPSVNDGQGQQQQQQQQQQCQAGKTKDTMEEVPEGVNSKVGEAESLPQVAQRARDKVVRVDSGAVYAIGAAATSPTHGTPLSSPSAPAKWLEFTAEVSPGALDADILSLCFAQLDHPELNGKATRHAPLRECIVCSTATTGLMSCCDVCGTITCDSCLSDRVVALIVSTGLRGPPLQCTRACSRSVATVAVIAALTREAASLLSMKREDEASALTDAADRYKRRVPAHRLTIAAGNERMPRFEKEISRDVRRVVACPAKGCMRVHVMASTIAVAVVAPDDHVPTAVGDDAISDRTRHEATTAAVADGRAVPLLITCSCGGRLCTGCGELVGSPSGAETHVRDCTQHCHANEMFARRTAGFTQRLAMEPASGTGPIARGIAASFGRILLEATTVTCPWCREDGRPPWTQG* # ORIGINAL: g2217.t1 original gene structure, not modified by PASA NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS gene 10671 11652 . + . ID=g2217;Name=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS mRNA 10671 11652 . + . ID=g2217.t1;Parent=g2217;Name=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 10671 10994 . + . ID=g2217.t1.exon1;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 10671 10994 . + 0 ID=cds.g2217.t1;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 11175 11296 . + . ID=g2217.t1.exon2;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 11175 11296 . + 0 ID=cds.g2217.t1;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 11461 11560 . + . ID=g2217.t1.exon3;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 11461 11560 . + 1 ID=cds.g2217.t1;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 11647 11652 . + . ID=g2217.t1.exon4;Parent=g2217.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 11647 11652 . + 0 ID=cds.g2217.t1;Parent=g2217.t1 #PROT g2217.t1 g2217 MEGMGRTCVVHDSSMMLHEGRRGCPEVPARIQSIAAKLERCGLLSKCVAVESRLATDDELLLCHSKSHVSAVDATREKAEDRMAGTNSTEGCVYMSANDTCANQHTSKCARMAVGSVLAATECVAKGDAINGFAVVRPPGHHAGPDTACGFCYYNNVAVAAKSLQQRHGLRRIAIIDWDVHHT* # ORIGINAL: g2216.t1 original gene structure, not modified by PASA NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS gene 4296 9848 . - . ID=g2216;Name=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS mRNA 4296 9848 . - . ID=g2216.t1;Parent=g2216;Name=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 9190 9848 . - . ID=g2216.t1.exon1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 9190 9848 . - 0 ID=cds.g2216.t1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 8740 8875 . - . ID=g2216.t1.exon2;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 8740 8875 . - 1 ID=cds.g2216.t1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 8326 8497 . - . ID=g2216.t1.exon3;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 8326 8497 . - 0 ID=cds.g2216.t1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 5623 8099 . - . ID=g2216.t1.exon4;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 5623 8099 . - 2 ID=cds.g2216.t1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 5322 5470 . - . ID=g2216.t1.exon5;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 5322 5470 . - 0 ID=cds.g2216.t1;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 4296 5205 . - . ID=g2216.t1.exon6;Parent=g2216.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 4296 5205 . - 1 ID=cds.g2216.t1;Parent=g2216.t1 #PROT g2216.t1 g2216 MADEGFQTITKKIAKKPGTAPAHPGVRALLPCTQDGDPKVEQQHRRYLTQFRVNACDRFMGKNCPNHKPFTCFSYHYDSQRRRNPFLDASESTLRYHPVTCPNKDNCPKGDACDKAHNHDELSYHPEVYKTKMGCEKSGGTFRCGGQHCSHAHSKEELRSFYSTMRGSAVVDHPTSQVLDLASYKTQQCSYTNCTRDFFQRDCIYWHSDRDRRRDLRVHWYAAERCARCFELMDLDSTCSDDCALSHNYIEISFHPSNYKTKECRMFAEGSCPRGTLCAYYHEGAERREPAVSLASLNPPKQIVLGDFVGGGMKSGAQQQDDYYGGAPLPYESTGLGTRTFSCDACNIKVNSARQFEEHLEGSKHKANVARKVDEKKASAATAQQSLPTPTMPVHTSHPQILTSAALPQATALPYAQLLTTALAQDPRDPFVHVLISRAHEGPVTTIAFLPDGSKFITANLVSAYVFDSEDGHLCAVLTCASIIECLSVSKSGNFIACGTTGGCVVLWSLKTSAKHRTLEADVAGGGAALSVSFVSGTDDALVAGYKDGAVRLFDVSAAAGSGGRMVRVFGGHQGAVLSVSIAADARTMATGSADGTVRLWDLSTGACSNELVHSEQEGDQPPEEVLCVSFSEDGHRLACACGSYAWIWVWENGSVRTERYLESPFAVVNAVAFNIDCSVLVTANNDGVTRLWGADGDPVMSMSGHENGVTGASWSLRDSRLVTCGGDGTFRLYWPRDLVVRRKEASLAPSVFVFPAAPASLPAPISSATTSHVIPAPVTAPNPTVAAVPAASVSAPVTAPASAPVPSSPALSSTGSTPLLQSVNGSHVPSATMSQQDDDDELFWGDAPVVAAAAQKAAPAAVTVPVAVPSKPKDKLVSKVVCQICFRAFMHKPTQVLVEQDASNPGQCRQCKSQWKPVRVSLTLKNRWMDARSRPENVEAEYRLCVHTSKGTCIRGNGCSFAHSNEELEIWNRDREIAKQEKIDRIMATVHAQNAPLASALAGPSSSAPTAVAAPTPLSQPTAMPTSAATASSAELNALFTVQPSPGLVSLQEQLNQLNALAAAADSPSSYDGELGGLAGHVSGDVAPDVAPDASSASAPDGVTFVELGDLARPKGGLSVGAADGGPLEATVAEPRDVTWILEAVNKGPATERLENVFVNAAEDSDFTIVSVEFSDPAHNFEDTEAVLTLKPGEFCRAVVNCRAGPSPSTRSVWVIFEFSPLYPGDAPVLLGSLVSVDCKPGNPTSVPASTDIAPSSLSARVTGITASKAASFQSPKSLWDSVVTPPMPSSAGSFSSVPPLSLPSLRGDGHQHTTIGSLWDSLDGMGSKPMSGLSAGVPRVPHHADLASLVDQLARSVASLKERASDELRGDVSQDVADVLRKQLLCVQQQMHHVSVLGDLQKAYADLCGQYERAVALAPSSVSSSSSSRLPPGFLGGMAPLQMHVGGHVGGHGGSHIGGQPSAIGRELPASLGFGQGGGFGFGIGNGLGNGLLYGQSF* # ORIGINAL: g2213.t1 original gene structure, not modified by PASA NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS gene 12 845 . - . ID=g2213;Name=g2213.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS mRNA 12 845 . - . ID=g2213.t1;Parent=g2213;Name=g2213.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS exon 12 845 . - . ID=g2213.t1.exon1;Parent=g2213.t1 NODE_1372_length_11721_cov_42.7192_potentialcontaminant AUGUSTUS CDS 12 845 . - 0 ID=cds.g2213.t1;Parent=g2213.t1 #PROT g2213.t1 g2213 MVVRRAFKRFAVRYSAGAAANTNHCNNDEVAAVLSIKKGVAEAIPEWTKSAIREMMQPNVSADSADMSTLVDECVARAYERLDTLIGMHTQPNWSCTTATNVASLLNRTLEEYTEGRFARQHWGVVDRTDDARNALHGVELFLAQLGAGTEESVPATTKGEYAVALMGQMLHATEAGFDATAIIVSNGTTHRIAIEQRRAIFADDLPDDNVERACLQVFHDISLHRVITRYCEALGVEAMRKVLAASTGHVRETVRAVGARFRNLFGDEETFASLNA* # PASA_UPDATE: g2253.t1, single gene model update, valid-1, status:[pasa:asmbl_2069,status:3], valid-1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . gene 904 8514 . + . ID=g2253;Name=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . mRNA 904 8514 . + . ID=g2253.t1;Parent=g2253;Name=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . five_prime_UTR 904 1012 . + . ID=g2253.t1.utr5p1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 904 1133 . + . ID=g2253.t1.exon1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 1013 1133 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 1305 1362 . + . ID=g2253.t1.exon2;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 1305 1362 . + 2 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 1513 1603 . + . ID=g2253.t1.exon3;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 1513 1603 . + 1 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 1797 1869 . + . ID=g2253.t1.exon4;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 1797 1869 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 2026 2207 . + . ID=g2253.t1.exon5;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 2026 2207 . + 2 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 2470 2589 . + . ID=g2253.t1.exon6;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 2470 2589 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 2790 3008 . + . ID=g2253.t1.exon7;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 2790 3008 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 3193 3436 . + . ID=g2253.t1.exon8;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 3193 3436 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 3632 3933 . + . ID=g2253.t1.exon9;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 3632 3933 . + 2 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 4117 4189 . + . ID=g2253.t1.exon10;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 4117 4189 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 4411 4785 . + . ID=g2253.t1.exon11;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 4411 4785 . + 2 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 4981 5603 . + . ID=g2253.t1.exon12;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 4981 5603 . + 2 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 5826 6611 . + . ID=g2253.t1.exon13;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 5826 6611 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 6920 7309 . + . ID=g2253.t1.exon14;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 6920 7309 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 7521 7910 . + . ID=g2253.t1.exon15;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 7521 7910 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . exon 8147 8514 . + . ID=g2253.t1.exon16;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . CDS 8147 8245 . + 0 ID=cds.g2253.t1;Parent=g2253.t1 NODE_1594_length_10298_cov_41.4019_potentialcontaminant . three_prime_UTR 8246 8514 . + . ID=g2253.t1.utr3p1;Parent=g2253.t1 #PROT g2253.t1 g2253 MARILFVLFVAAAVVGAMAAPNYPVCQDLLDAAQGKQALSDPSKAPVVCSGHGKVHARLWCACEEGFYGPCCEFDIDECGYAGTCDVHATCENTLGDRKCACMEGFSGDGLECVDIAPPVLTINQETTLTLKQYDSFVDPGASAADNLDGDLTGKIKTDSDVTTAIPGTYTVQYTVVDAAGNKATFKRSINVLDIDECSLARNSPFADKCHERASCANTDGSYTCTCDRGYNGDGFSCVDVEAPVVVIDSDADITVFQYATFDAPSASVGDNSGETINIDVVNPVDSKRPGRYVVVYSATDSAGNVGSASINVEVFDVDECIYTGLSTANSKSRLPFTPCHVFSTCTNTIGSYICVCISGYAGDGFDCKDVQPPTLLLKGNPVERQPQFTPYVDDGATAFDNHDGDLTRGIQSSGSVDVNTPGTYVITYSVRDIALNEASITRQVTIDDVDECAVPSTHPQFNKCNANAICTNTIGAYSCKCKDGFQGNGFACKDITPPALTVRGSSVERQEQYTAYTDDGASSIDNLDGDITSKIVSSGTVDVKVPGEYIISYTISDATGNQATATRKVTIVDIDECQQPKLSATAHKCDEWASCKNTIGSYTCKCDNGFVGDGFTCKDITPPTVELKGASVIVLDQFSAYADEGALAVDNKDGDLTAKITVSGSVDTRTVGEYTLTFSATDATGNTGSIKRSVSVQDVDECAVGSANDNAAKCDKNAYCTNRVNSYDCICNDGFSGDGKTCRDVTPPVITTAISETFINQYDTFIIPSATANDNYDGSLTAKVVPTSTVNALVPGWYKVSYAVSDAAGNAAQTKVIDVEVRDINECTRTDSRRNNCSPQGWCLNTVGSFKCTCQDGFTGDGVVCRDTTAPIIDVNVTPVAVDQYSDITVPSAVASDNFDGVISSRIRVTSNVNTRAAGTYTISYDVSDIAGNTATTRRVTVTVRDINECTHPTIKANCSPYGFCTNTFGSFTCACNDGFRGDGFSCVDVTAPVITVNTAALTVSQFSPFAAPSATAYDNLDKDITSIVRVTNPVNSNTVGTYTVRYDVTDRSGNVASQRTVTVTVVDVDECTTTSSTLRNKCNRWATCSNTVGSYSCACNTGFAGDGFSCTDVTIPTITLVSDAAVTVNQFATYKDSGARASDNVDGDISSRIAVSGSVNTAVVGTYTITYNVRDTASNAARTVTRAVSVLDINECLTGKTSPDGSTTPGGCDKRTTCLNTVGSYTCTPCPRGFSGDGFRGCSPIVCNFQDYWSSACGAIATDESQRCSDGGFLINPSSCSTHFYSNSRGCGFWNLGCQSQCRKVLNAPCNCAYVEYWSSNCGVADLGVSSTATARTCSDGGELVSPYSCYTVFNSWSQSCGFLALGCQSKCRKFQCQN* # ORIGINAL: g3882.t1 original gene structure, not modified by PASA NODE_386_length_25081_cov_43.1118 AUGUSTUS gene 20923 24907 . + . ID=g3882;Name=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS mRNA 20923 24907 . + . ID=g3882.t1;Parent=g3882;Name=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 20923 21211 . + . ID=g3882.t1.exon1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 20923 21211 . + 0 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 21452 21525 . + . ID=g3882.t1.exon2;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 21452 21525 . + 2 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 21664 21749 . + . ID=g3882.t1.exon3;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 21664 21749 . + 0 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 21990 22062 . + . ID=g3882.t1.exon4;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 21990 22062 . + 1 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 22443 22557 . + . ID=g3882.t1.exon5;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 22443 22557 . + 0 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 22900 22991 . + . ID=g3882.t1.exon6;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 22900 22991 . + 2 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 23315 23447 . + . ID=g3882.t1.exon7;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 23315 23447 . + 0 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 23762 23864 . + . ID=g3882.t1.exon8;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 23762 23864 . + 2 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 24300 24432 . + . ID=g3882.t1.exon9;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 24300 24432 . + 1 ID=cds.g3882.t1;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 24755 24907 . + . ID=g3882.t1.exon10;Parent=g3882.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 24755 24907 . + 0 ID=cds.g3882.t1;Parent=g3882.t1 #PROT g3882.t1 g3882 MAKTGARSSDARAGGKPGGAAASTSTNAPSNSASNATAVASDGQNATTTAASNGQNGVAAPGDNAPHGEQQEQPPQWQQMLSRLIFFYFIYSTFFKSGTPVDKSGSVIQPSKNLFSALEPVQLRVYLSDSEVFRGFNDSSALVWREDDIRLGDFTAGPYNNGTLSTFIDIPLSEAVQRNGSLYAHIYFSKIGVSPDPWAFDYDRAGVIYSKKLITRYMPKMQLKNKKNLITGEHEDNKTMTSDALTPPVQDTSVKTIVSYWDPYLTMNLVDDYSPLHIESLPPPLRPHYHVEPISNNYYPVLYLNDFWTFTTDFLPINETLTTAPLHITYYPIPNWKFQLMTQMDASFNLHEQWGSMAENESDEFKRMLIETNPYLLGLTMAVSMLHSVFDFLAFKNGGWNAYHCGVRGHSARQPA* # ORIGINAL: g3880.t1 original gene structure, not modified by PASA NODE_386_length_25081_cov_43.1118 AUGUSTUS gene 4121 9960 . + . ID=g3880;Name=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS mRNA 4121 9960 . + . ID=g3880.t1;Parent=g3880;Name=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 4121 4258 . + . ID=g3880.t1.exon1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 4121 4258 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 4491 4546 . + . ID=g3880.t1.exon2;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 4491 4546 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 4716 4779 . + . ID=g3880.t1.exon3;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 4716 4779 . + 1 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 4968 5177 . + . ID=g3880.t1.exon4;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 4968 5177 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 5634 5714 . + . ID=g3880.t1.exon5;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 5634 5714 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 6056 6135 . + . ID=g3880.t1.exon6;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 6056 6135 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 6366 6435 . + . ID=g3880.t1.exon7;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 6366 6435 . + 1 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 6863 7013 . + . ID=g3880.t1.exon8;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 6863 7013 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 7568 7656 . + . ID=g3880.t1.exon9;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 7568 7656 . + 2 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 7992 8078 . + . ID=g3880.t1.exon10;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 7992 8078 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 8386 8493 . + . ID=g3880.t1.exon11;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 8386 8493 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 8743 8890 . + . ID=g3880.t1.exon12;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 8743 8890 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 9251 9399 . + . ID=g3880.t1.exon13;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 9251 9399 . + 2 ID=cds.g3880.t1;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 9856 9960 . + . ID=g3880.t1.exon14;Parent=g3880.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 9856 9960 . + 0 ID=cds.g3880.t1;Parent=g3880.t1 #PROT g3880.t1 g3880 MALNGDVESMRNPMATAVPLSLGFRVSAVLPAGGTGTRVGISTPKQYWPIYGKPLLFYTLEVFESIPWLSEVIVPVSEDAIAELQKDIAEWKFTKTRAVLGSSTRHRSIRSGVIAASSPLSQTSTMHDAVNLINAGSGASVGAINTGSPAAGAPDVIIVHDIVRPFVDEDILRKVSIAALEHGAAGAILPLVSTVVMATADGFLDHSLDRTKYRASQTPQAFRTEVIRTAYDKCTDYDFEYGTECLHIALEYANARAKLIEGTPLLWKVTHKPDIYAAEHMIKERLRSVAIVTGGGRGIGEAVARGLSDRGMKVAVVARTHAEVASVAEKIRGLPIVADVSKVEDVARVFRTVYEAFGRIDVLVNNAGSAIHARIEDMTDDQWASLVSGNLSSTFYCSREAMRAMRTGGRGGVIVNVGSSSVSGGRVGEGAYSATKAGIQCLTETLALEGRPHNVFAYCVVPRRTATQLRRDLYPNEDSINCLAPEDVAQTIVGVATEWTPWLTGHAFWVK* # PASA_UPDATE: g3879.t1, single gene model update, valid-1, status:[pasa:asmbl_6659,status:12],[pasa:asmbl_6661,status:12], valid-1 NODE_386_length_25081_cov_43.1118 . gene 2145 3777 . - . ID=g3879;Name=g3879.t1 NODE_386_length_25081_cov_43.1118 . mRNA 2145 3777 . - . ID=g3879.t1;Parent=g3879;Name=g3879.t1 NODE_386_length_25081_cov_43.1118 . five_prime_UTR 3767 3777 . - . ID=g3879.t1.utr5p1;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . exon 3689 3777 . - . ID=g3879.t1.exon1;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . CDS 3689 3766 . - 0 ID=cds.g3879.t1;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . exon 3319 3491 . - . ID=g3879.t1.exon2;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . CDS 3319 3491 . - 0 ID=cds.g3879.t1;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . exon 2145 3018 . - . ID=g3879.t1.exon3;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . CDS 2622 3018 . - 1 ID=cds.g3879.t1;Parent=g3879.t1 NODE_386_length_25081_cov_43.1118 . three_prime_UTR 2145 2621 . - . ID=g3879.t1.utr3p1;Parent=g3879.t1 #PROT g3879.t1 g3879 MRLMQTNMTVTVAFVALPSGAVLYAKRMKPTDAANALDGTDIRLGALIATFFQMSRELGQKGARIVRFDGSAFALAGSSTPQSRVNSGAISQASSVSRHAKVPSPIATSANATLALSNNDTIAVGLLNEGGSLDSRLAGFANTTHRADKDFRACSAADALLALFIGRYGAAIESVLPLIAQWGNDDADRTALRTSFANAFPGLDVVVTEALGGTL* # PASA_UPDATE: g3878.t1, single gene model update, valid-1, status:[pasa:asmbl_6660,status:12], valid-1 NODE_386_length_25081_cov_43.1118 . gene 160 1783 . + . ID=g3878;Name=g3878.t1 NODE_386_length_25081_cov_43.1118 . mRNA 160 1783 . + . ID=g3878.t1;Parent=g3878;Name=g3878.t1 NODE_386_length_25081_cov_43.1118 . exon 160 1783 . + . ID=g3878.t1.exon1;Parent=g3878.t1 NODE_386_length_25081_cov_43.1118 . CDS 160 1755 . + 0 ID=cds.g3878.t1;Parent=g3878.t1 NODE_386_length_25081_cov_43.1118 . three_prime_UTR 1756 1783 . + . ID=g3878.t1.utr3p1;Parent=g3878.t1 #PROT g3878.t1 g3878 MLNKSDIREYATSVRARFYSSGMLVLRATGVGLRPRGCGSSSAWSHYAHFKVSLHTRGGCDHVRTVCALSSPAQHSTLSTVPTVRVRGAHSHSHSHSDAALSPTLSLSTAGLRSGIQRDDAPEPIAASKRLGHNFAPFLTTELYASAKKVFAEWTRDSSLQGGGGTRGPYTKYWDEMRAILKENNAISVVAARHSRHFTMEDDRRIIEWIKEGQGWTEIGRALGKSPVQILRRFTGSLDPRLRHAPFTAEEDAAIHAHVSAHGEGNWAVLSAKMGRTRSTVALQIRYRHKLRPDTKKGVWSDDERRRLLEGIVKHGRAWVAVASHVGTGRTPLHCQNTARQEFRGFDYAGTVRGKRFTPDEDAYLCIAVERYERNWDKVAEDFPGRGKFVLRNRYGRILSQWLQVPYTRDMRASLRALLRGDGDVVSKLAAQFKDIDAAKGWVALELGMDDGSQVDWARVNGASGAERSAALDAVEKDIVPRVTAEEWKEGASAVWVPAWRWERPICEGRKAPIEAVANHSKIQMFVSRSQ* # ORIGINAL: g3881.t1 original gene structure, not modified by PASA NODE_386_length_25081_cov_43.1118 AUGUSTUS gene 10636 19581 . - . ID=g3881;Name=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS mRNA 10636 19581 . - . ID=g3881.t1;Parent=g3881;Name=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 19129 19581 . - . ID=g3881.t1.exon1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 19129 19581 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 18771 18933 . - . ID=g3881.t1.exon2;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 18771 18933 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 18414 18607 . - . ID=g3881.t1.exon3;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 18414 18607 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 17783 17975 . - . ID=g3881.t1.exon4;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 17783 17975 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 17116 17507 . - . ID=g3881.t1.exon5;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 17116 17507 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 16720 16873 . - . ID=g3881.t1.exon6;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 16720 16873 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 15350 16551 . - . ID=g3881.t1.exon7;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 15350 16551 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 14893 15102 . - . ID=g3881.t1.exon8;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 14893 15102 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 14477 14593 . - . ID=g3881.t1.exon9;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 14477 14593 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 14169 14272 . - . ID=g3881.t1.exon10;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 14169 14272 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 13352 14022 . - . ID=g3881.t1.exon11;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 13352 14022 . - 1 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 12429 13117 . - . ID=g3881.t1.exon12;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 12429 13117 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 12083 12245 . - . ID=g3881.t1.exon13;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 12083 12245 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 11646 11830 . - . ID=g3881.t1.exon14;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 11646 11830 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 11177 11459 . - . ID=g3881.t1.exon15;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 11177 11459 . - 0 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 10868 11012 . - . ID=g3881.t1.exon16;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 10868 11012 . - 2 ID=cds.g3881.t1;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS exon 10636 10714 . - . ID=g3881.t1.exon17;Parent=g3881.t1 NODE_386_length_25081_cov_43.1118 AUGUSTUS CDS 10636 10714 . - 1 ID=cds.g3881.t1;Parent=g3881.t1 #PROT g3881.t1 g3881 MGRSTRAPNGDSEDSATLEEMLIQQYMHEIHRDDNRSRSATTSFHPSQQHTEDTSSSRENASPFYAPPLHPDGTALSAAPPAKKVRPISAVARPSSGVKSKRARPMSAPISKVKAKARPLVEEKQYAVRVIAMRNGTADDGVIIAAASMEEFLSECREKLALAAPARRVFNATGEEVFDIRHLEGGTKVYVSCGEAFIDPLQFAKDIAGVKPRWTTRGLEYGEGFKSKMTVAAVTDGIRKLIVPRNDRVLVFRNGDGVIGAEIVSTRLEKFLEECSKRLKIASIPRKLFDISGRVVTDLTKLPVPDRRLSGTAGRTSGPLWVSCGEPYESRGANAYLDQLVARTKKRLSDINTEIKSAHEANAHVEEAKLNKMADEARDCLHAIDELRDSVPASSFDPTHPCNDMSHIPELESGKSKLVQIDETVKLRVVRNGDTSLHANLTFRFEKPSMFKRSGLSYKAALRDKLLDDCTKRLNLTSFAKRLFFETGEEIDDVRAQVKRDMVVYVSCGEDFVMPEDTVLELSTQGRHVAMTKNGMAHLVDCKDPTHCDCARKGQGDWVVRDDAAELTHEEDAAAQSDNDNSESGDISDFREPLRIAGKTGHAAMAARLLGGGGGGGGGGASANSSSNEGGGQGSGRPGVGMVKRTDSRFNIFAETTPHTHSPDGEHGGDGIKEPRMVRSGSLVQLKGNPDVVMQPELTFVKRRTKDVDAQKWMLTADGYIASRQVPDLVLSVGKHRIGDSIEVVAYRKIPNNPRQLWQLHPTAHISSCASDVSNLVLTMIEIADPNMDPFARGAAKGKAGKLVVAPLQKNAANQRFGLLQDGYNQLYHHRLTRQENPDWNRRLFTMPVLPDGQPNKQLKWPLVGWLVANAPAVNTDAGPKTDSRFLRSVAQRLRVLQNGNFDKDRAVFVVAPDVAEVFSRNEDQKSKPKGMSVHKQFNIAWWLKMYQRGPKDEGTSGTSQASQSPGVTASGADDDKKSAAQIQFELFLDRCTGTLGLPAAARRLFTKDGTEHFELESIPRDTLVWVSTGDGFQYRSKKEMVMRRTEKIERATAELTKGRRFYRALREMKRPFALRRCDPDDDGLGPIELAPLEPRDDTQLWLLEEETGYLRLRNEPYELVGYRSEDVARDLENDRAVEEREAIARSLRDEQALNNSTDQYGIDAALGLAPPPPLPLPAQHGAPPQGAIPHGLVFVPRPEGEDVGDGDGERARAGCSFTWIYQPDTKHVVLVDNPELCIEVAVDGKVEGTKAVVARYRDKWAPQMFDFDENGTLLAFAASASEITFAATEKAGVCSLASPWGRNTTEPPSQLGFICLTCTDEMRKLNGGTLVTHDTHAHGAFPSAAPSHAAVSTSARSRRTSLGIDSNYIVCLACSKSCHRTHRIEPAAMSEYAFSCACGQASPCKALGGDEPTLDEDAEEREMERLHAALSKAKGVRPQSARVSTGGIRASPGAGESGRMSFGSPTVGGVVPSSPSSARKQAQQHSQIRVMAFRNGDSEQSSAVIVVATHHTTMLEMCTQRLRLQTAARRLFNQDGTEIFDIKRLQLKEGETVRVYVSCGEPFRDPVVTRQMQALRHQIAYEKSLVEQLRARRHPNEPPTKEELELADYTQGLEDKLSEIKNRNGLSLQPRKLPATHRLCSRASAVRLWVRENGSDRDDGVVVTGSDFTMVLENAMKRLGLTSAARRLFASDGSELRTLDELQKLPRDTVVWVSCGESFRDPKDVRKQILAKAALSRSMRRTASVGEIVEIQMRATGAPVIAPPKSPRAPDRSRSVMGNNSTFVPGHTMGAGASLVA* # ORIGINAL: g13677.t1 original gene structure, not modified by PASA NODE_926_length_15797_cov_41.8973 AUGUSTUS gene 599 1318 . + . ID=g13677;Name=g13677.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS mRNA 599 1318 . + . ID=g13677.t1;Parent=g13677;Name=g13677.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 599 1318 . + . ID=g13677.t1.exon1;Parent=g13677.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 599 1318 . + 0 ID=cds.g13677.t1;Parent=g13677.t1 #PROT g13677.t1 g13677 MESSDNTDTADKAKPTLSLDTSEVTLNDGDSVNSDVGYIFPTPDVPLVPDNTHPPSPRVVTPVELPPARTLQKRRTVIGRAPKALCLHINRVYWWPDGRPRKSDRAVRFPPTLDLAPFCDVSAFCGQDESAPASSLSRSTSALGVSSSPLHAHIAQLRSHTAPGRPDGRAPSSSNSLYRLSAVIVHYGGGSGGHFAAYRRVTDGTVDGRWLMTSDAVVRMASLQEVLDSQGYLLFYSRT* # ORIGINAL: g13678.t1 original gene structure, not modified by PASA NODE_926_length_15797_cov_41.8973 AUGUSTUS gene 1733 5457 . - . ID=g13678;Name=g13678.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS mRNA 1733 5457 . - . ID=g13678.t1;Parent=g13678;Name=g13678.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 3154 5457 . - . ID=g13678.t1.exon1;Parent=g13678.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 3154 5457 . - 0 ID=cds.g13678.t1;Parent=g13678.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 1733 2914 . - . ID=g13678.t1.exon2;Parent=g13678.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 1733 2914 . - 0 ID=cds.g13678.t1;Parent=g13678.t1 #PROT g13678.t1 g13678 MAHPMNEEVFLPGFVVDAQRPEPTDALPPATESASSPAVARGSDDNSHALLTPIVHEWAFDGIEKISCLTGQAALDAVAQAGATASISRRSKKNAVWSAEALAALDDKADEGSSKGNERDSVGQSLGWTTQASHPNDETFGIDPNQCNSLSASGTGSRFRARQQQQRGTLGSASTQQFHALTTDAMGGEGSMYLSSPFVQYELSLNNSLGCAVLGRARGIRMHKLFGRKPVVIASNITWFFSLVIIFLCTANAAFLVHIKPLIWTIAAADVVILTQFLSLSNVFVLRRLLRTFEVWFIIVQAVLFVLVFCFLWRFDYRTPFGFIALIAILTLVVSDAQHPLIRKLSLYYGCIGLVTLVYIYVFVYFQLTSDYDGDHTYKLGEFTIDIRIFATDRIISIAIYYFMYVLVLLLRKNVILFLTTPFKATHRRMIRMPPPMVVVASAPSDEHDKTTTETAADAALSSTPVTSDSFPRSSLVERGGALASESKGRVSFASDGNRRSSLQSSSSVRECGKRSLGSVNERRVPAWAATPSDMESLNSFTNPRDALSGHAEGDALAMDNAATPTNNMQSQSLKSPSGGSLSIRPAVHNKHRSSTMLSTESEASPSVVTALTRTVDSADCASLASGSINNSDAMSTVSRGTGLLSVLAGKVKAGSKGRSGRRGHIYYMYSPPLELTFKVHNHTLGHKIMGEAGARRMYHFFRPWPIWGLGAVFWTVGITLVAIAPFNFGFMDSALSYVVFVGATLMQLQLLSRMNYDIARRLVRNFEWWFVMVQAVGALFGCLWMWGWGPRSLILLYGAMGHFYVGLFDAQSAKLKTSARYGLVMGSFAVFLNFVCVYFQLASEYKQPSILSMGSFHLDVRLFTCDRFLLLIVYYIKYTSAAFKDRDSVILLSAPLTLSRTPYSTADNDDSARPSNNDNNNNNTDAELERNGMSTATTRQSLVHHVPEEPGEADHSSAPSAAAARRTSRGRLSAVESDGEDTLRHGSIHANAHAHAHAHESGNGGDARDDAAADVRPEGRRMSRLGSIASLILNVTVGALGGPMHGVYAGVGGPLRGATTLPLPGDEQEYVDEGDIGYDGAFGGAHCDGDERHCNEGCAASTVSAEEEYNLEEFASDDEENSRCAGDEAHAHPSNVDAGAVGQIEVDIRDDTDASGADPS* # PASA_UPDATE: g13680.t1, single gene model update, valid-1, status:[pasa:asmbl_10014,status:3], valid-1 NODE_926_length_15797_cov_41.8973 . gene 10706 13995 . - . ID=g13680;Name=g13680.t1 NODE_926_length_15797_cov_41.8973 . mRNA 10706 13995 . - . ID=g13680.t1;Parent=g13680;Name=g13680.t1 NODE_926_length_15797_cov_41.8973 . five_prime_UTR 13868 13995 . - . ID=g13680.t1.utr5p1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 13565 13995 . - . ID=g13680.t1.exon1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 13565 13867 . - 0 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 13190 13310 . - . ID=g13680.t1.exon2;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 13190 13310 . - 0 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 12659 12943 . - . ID=g13680.t1.exon3;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 12659 12943 . - 2 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 12175 12386 . - . ID=g13680.t1.exon4;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 12175 12386 . - 2 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 11769 11889 . - . ID=g13680.t1.exon5;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 11769 11889 . - 0 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 11257 11445 . - . ID=g13680.t1.exon6;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 11257 11445 . - 2 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . exon 10706 10894 . - . ID=g13680.t1.exon7;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . CDS 10794 10894 . - 2 ID=cds.g13680.t1;Parent=g13680.t1 NODE_926_length_15797_cov_41.8973 . three_prime_UTR 10706 10793 . - . ID=g13680.t1.utr3p1;Parent=g13680.t1 #PROT g13680.t1 g13680 MAQSQKHVMISYQWDNKAMAAKVAEAFKARAIPYWIDVEEMSGHIQDAMAAAVEKSWVVIPFMTEKYQLSANCKKELSYADRLGTVKIIPILSQKNYIASEWLGFITAALLYFDFTDEAKFDSNMDALVAEIYKQIPHLAPGTSGPRPTSARPSSSSSMRVAPTVRPQSATAVASPVVRGLPQLRVDVFSLKGAEDAHPSVVVDIPPSHKIVGGGAVVNWTRAGNLLTAAYPVIDNGRQAWVACAKDHMSSDPATITGFCVAVNDPDNAFDVAVFTATSDCAAHPSAVATIPPDSGFTLVGGGAFVQPLEPGSMLYASYPSDDGRSWQVNAKDHLESCPARATAFAIGLRARDPTVAVTSQVFSSTSASASHPLAEVRTGDLPPNSALTCGGGYAHFHGSGSLLCSLFPSSATSWVAKAKDHCVADPGEVTSFAIVTTVSRKQ* # ORIGINAL: g13679.t1 original gene structure, not modified by PASA NODE_926_length_15797_cov_41.8973 AUGUSTUS gene 6343 10505 . + . ID=g13679;Name=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS mRNA 6343 10505 . + . ID=g13679.t1;Parent=g13679;Name=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 6343 6417 . + . ID=g13679.t1.exon1;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 6343 6417 . + 0 ID=cds.g13679.t1;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 7128 7250 . + . ID=g13679.t1.exon2;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 7128 7250 . + 0 ID=cds.g13679.t1;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 7642 9225 . + . ID=g13679.t1.exon3;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 7642 9225 . + 0 ID=cds.g13679.t1;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 9585 9857 . + . ID=g13679.t1.exon4;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 9585 9857 . + 0 ID=cds.g13679.t1;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 10245 10505 . + . ID=g13679.t1.exon5;Parent=g13679.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 10245 10505 . + 0 ID=cds.g13679.t1;Parent=g13679.t1 #PROT g13679.t1 g13679 MPLFSEDSTRGARIQVLSKPKSFFKEGAIFHVNLSFRVHGEHMGNIWLIVVEKKSLLPDAIAELRDRGERPMDAPYFAVRLGEFQAGPQPRSAYFRGVCGRVHRSVQTGPTRLQSLASTNSHGAGSFQSAGRNAQTSSSPPSMRAHFSENSNNISSISSSPRRLSIVSGSDGLDAIELEANDRGELEEVHTLGQHVGLSSRSFRDFERTNLLRIIYTFYVVADGVEGGVGGGHADITSAGAGVRLSVAGGVHHSQHVNEKEARKRMILCKFKLGLGVVRDGTDPMELIPASIMRDRRWNPPTLSTARSCRENVRRTVVCAHAAAMDCSAMPAWKRAMYKQLVARNRTQRDPFEVLVEAQQRLLQRTATPLRGESQIDYAPRTAEFGDNLIRTDDLIRLMQLVVTGQAIHYIVGQDGSELAYRMAVPTPAAAAGVKPVANVILVPGLFVNSLHRHFILEALVRILPVNGFTVDMRGHGMSSGKRGDTPNSKCLLKDLRSMVKHVRLNFPGLPLVITTHGIGASIVLKYAKWKRHESPDAYFIMAPFLHLLIRRELHEWFGANLGRKYVPVAAAVGDFFNAISRGALYRQKAVDCQAIHDKVLGKTEAINMRVRLDMKYVQGNDEREEQSFPKYVTGNTIRGNIVLNPKKAVAKIDRPFGVAVGELDELFDARDVLALFEPSVVSNKHLEIVPGVGHIGLMEVGHELLANFIKTVFAAVARASSTADANRPSTQPQVRSSAVSGAATHETHSTQRTTAGVTTVGTVQGGDEAR* # ORIGINAL: g13681.t1 original gene structure, not modified by PASA NODE_926_length_15797_cov_41.8973 AUGUSTUS gene 14770 15548 . - . ID=g13681;Name=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS mRNA 14770 15548 . - . ID=g13681.t1;Parent=g13681;Name=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 15396 15548 . - . ID=g13681.t1.exon1;Parent=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 15396 15548 . - 0 ID=cds.g13681.t1;Parent=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 15014 15103 . - . ID=g13681.t1.exon2;Parent=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 15014 15103 . - 0 ID=cds.g13681.t1;Parent=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS exon 14770 14895 . - . ID=g13681.t1.exon3;Parent=g13681.t1 NODE_926_length_15797_cov_41.8973 AUGUSTUS CDS 14770 14895 . - 0 ID=cds.g13681.t1;Parent=g13681.t1 #PROT g13681.t1 g13681 MYERLKKEHNLNYVKRDAPPSAVDYPQYFSINTMRACVVPNSADAIKAVDRPFAWTIGGKNEVLDPKRFVRLAEHSKVSNKHVEILADYTYIGVIDAVPEIIADFKAQCLANWKEDPDVRRT* # PASA_UPDATE: g8863.t1, single gene model update, valid-1, status:[pasa:asmbl_6500,status:3], valid-1 NODE_3758_length_2812_cov_41.8451 . gene 1471 2642 . - . ID=g8863;Name=g8863.t1 NODE_3758_length_2812_cov_41.8451 . mRNA 1471 2642 . - . ID=g8863.t1;Parent=g8863;Name=g8863.t1 NODE_3758_length_2812_cov_41.8451 . five_prime_UTR 2569 2642 . - . ID=g8863.t1.utr5p1;Parent=g8863.t1 NODE_3758_length_2812_cov_41.8451 . exon 1754 2642 . - . ID=g8863.t1.exon1;Parent=g8863.t1 NODE_3758_length_2812_cov_41.8451 . CDS 1754 2568 . - 0 ID=cds.g8863.t1;Parent=g8863.t1 NODE_3758_length_2812_cov_41.8451 . exon 1471 1571 . - . ID=g8863.t1.exon2;Parent=g8863.t1 NODE_3758_length_2812_cov_41.8451 . CDS 1541 1571 . - 1 ID=cds.g8863.t1;Parent=g8863.t1 NODE_3758_length_2812_cov_41.8451 . three_prime_UTR 1471 1540 . - . ID=g8863.t1.utr3p1;Parent=g8863.t1 #PROT g8863.t1 g8863 MTFTDVFASPIFYNVAVGQTAWMTLMWLLHYPLRNLGMVDFGWPSGFTFITLAYALSGPAGLRKWLIAIPYLFCGARFMFGWFLRTRIHGEDRRWPMWRERWANGEGALGVRSEVLNSLAFYQAQSLANIFSMTLPVAFAAIDVEKEIGVWEIAGVALWFVSFALENVADTQLAKFKANRNNRGGVCNIGLWKYSRHPNYFFEFLIWCSYALYTVPSCNESGDWAVVFALPVVAYYFLVHFTGVPMTEAGSLKHRGEPYRLYMERTSMFFPWFPSRAGKKD* # PASA_UPDATE: g8862.t1, single gene model update, valid-1, status:[pasa:asmbl_6499,status:12],[pasa:asmbl_6501,status:12], valid-1 NODE_3758_length_2812_cov_41.8451 . gene 261 1460 . + . ID=g8862;Name=g8862.t1 NODE_3758_length_2812_cov_41.8451 . mRNA 261 1460 . + . ID=g8862.t1;Parent=g8862;Name=g8862.t1 NODE_3758_length_2812_cov_41.8451 . five_prime_UTR 261 261 . + . ID=g8862.t1.utr5p1;Parent=g8862.t1 NODE_3758_length_2812_cov_41.8451 . exon 261 415 . + . ID=g8862.t1.exon1;Parent=g8862.t1 NODE_3758_length_2812_cov_41.8451 . CDS 262 415 . + 0 ID=cds.g8862.t1;Parent=g8862.t1;5_prime_partial=true NODE_3758_length_2812_cov_41.8451 . exon 591 1460 . + . ID=g8862.t1.exon2;Parent=g8862.t1 NODE_3758_length_2812_cov_41.8451 . CDS 591 796 . + 2 ID=cds.g8862.t1;Parent=g8862.t1 NODE_3758_length_2812_cov_41.8451 . three_prime_UTR 797 1460 . + . ID=g8862.t1.utr3p1;Parent=g8862.t1 #PROT g8862.t1 g8862 TEPSLSAYPEWNAALKFKLRFVEIALLRICAYDNQHKLIGQCTMALDSVNKGYRHIPLFTSRWEPLDLSTLFVHINFEDIVPEQHADFMEQLLCPVSSEDRHSDFLGGLGGGSSALAPF* # ORIGINAL: g6478.t1 original gene structure, not modified by PASA NODE_1328_length_12086_cov_45.7027 AUGUSTUS gene 1845 2327 . - . ID=g6478;Name=g6478.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS mRNA 1845 2327 . - . ID=g6478.t1;Parent=g6478;Name=g6478.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS exon 1845 2327 . - . ID=g6478.t1.exon1;Parent=g6478.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS CDS 1845 2327 . - 0 ID=cds.g6478.t1;Parent=g6478.t1 #PROT g6478.t1 g6478 MHYIIPCRMVLYAGQSNVRPIGTFILTAFFIRGRGILSTPDDPTMLLERITGLPPATLNIHDDYLHVVSNATDTALDHIRATFIENVGNDVEWIHENAFHLMAHSHCHTTLIDALNVIKDKPSDYFSDETCVHYFSFTSIVRALIENPLSVKGHVSGGAI* # ORIGINAL: g6479.t1 original gene structure, not modified by PASA NODE_1328_length_12086_cov_45.7027 AUGUSTUS gene 8694 9683 . - . ID=g6479;Name=g6479.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS mRNA 8694 9683 . - . ID=g6479.t1;Parent=g6479;Name=g6479.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS exon 8694 9683 . - . ID=g6479.t1.exon1;Parent=g6479.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS CDS 8694 9683 . - 0 ID=cds.g6479.t1;Parent=g6479.t1 #PROT g6479.t1 g6479 MKFANDSVELDFKDVLIRPQFSKLKSRQDVSLHCELSFRHSPHKWHGIPLVAANMDTVGTPEMAAALAQFDCVTALHKFVEPVEIADRFNPDRIMISTGITTDDLARLRRFETPKMICVDVANGYMESLDGFIGRLREQFPEAIISCGNVVTGDRTEELIEAGADIIKVGIGSGFVCTTRLKTGVGRPQLSAVAECADVARDCGGHVISDGGAATIGDMAKAFGAGASFVMMGTRLAGHQESAGELIDGDDGQRYKMFYGMSSDTAMHKHYGGMASYRSSEGKTVKVPYKGPISKTMLDILGGLRSTCTYVGAAGLRELRDKVTFYRVN* # ORIGINAL: g6480.t1 original gene structure, not modified by PASA NODE_1328_length_12086_cov_45.7027 AUGUSTUS gene 10855 12067 . + . ID=g6480;Name=g6480.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS mRNA 10855 12067 . + . ID=g6480.t1;Parent=g6480;Name=g6480.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS exon 10855 11727 . + . ID=g6480.t1.exon1;Parent=g6480.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS CDS 10855 11727 . + 0 ID=cds.g6480.t1;Parent=g6480.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS exon 11846 12067 . + . ID=g6480.t1.exon2;Parent=g6480.t1 NODE_1328_length_12086_cov_45.7027 AUGUSTUS CDS 11846 12067 . + 0 ID=cds.g6480.t1;Parent=g6480.t1 #PROT g6480.t1 g6480 MFILKFNGDCMASADNILKSAAVVRHFALQSKTVVVVSAASGVTDLLLGNNAESATRLYNQLLADLQIDPSPLVCSFGGPYTGEVVSAEIFSHVLRLSGVAVASCSVGISCTDSGEPDVDLTKRRIAASDLLTLLSTGTDRRATTVLGFDRTELGVDRTVLGVDRTVLGVDRMIGFTSDIIPVVTGFAALSSDGSTVRCMSRGASDTTAVLLATALDEDTAIFINTKTILATKLSYEQAAECARHGSSINFDAVEIARRTQIRIDLRLLEEPFETKTVISNIAGDQPVYSTENKSPLEIKSQPQNKSPLEIKSQPQNKSPLENKSPLENKRPLENKSPLENKSPLENKNSSRGGETPQLSTTDG* # ORIGINAL: g436.t1 original gene structure, not modified by PASA NODE_1165_length_13437_cov_42.6551 AUGUSTUS gene 5384 7088 . - . ID=g436;Name=g436.t1 NODE_1165_length_13437_cov_42.6551 AUGUSTUS mRNA 5384 7088 . - . ID=g436.t1;Parent=g436;Name=g436.t1 NODE_1165_length_13437_cov_42.6551 AUGUSTUS exon 6988 7088 . - . ID=g436.t1.exon1;Parent=g436.t1 NODE_1165_length_13437_cov_42.6551 AUGUSTUS CDS 6988 7088 . - 0 ID=cds.g436.t1;Parent=g436.t1 NODE_1165_length_13437_cov_42.6551 AUGUSTUS exon 5384 6872 . - . ID=g436.t1.exon2;Parent=g436.t1 NODE_1165_length_13437_cov_42.6551 AUGUSTUS CDS 5384 6872 . - 1 ID=cds.g436.t1;Parent=g436.t1 #PROT g436.t1 g436 MASPMELDESPSGSDARMSALIGAVTLLEENCKRELNLELESVRDGKAASDLRKRRLLESFLSRGAGAGSSSSIGRRQSHGLVAEVSRRRQVRYSPMHLSRSNSRTSNGDRDDAERTLPPELRELAGRALVQTILTDSLLSRQMERNIVRAAERFQTDPHYRHVHHAGRRNEPQRQGTAHVPQQQRVPPQHTQSQAPHAGHDALRHPRQGGDDSTVRMTVSVTEQVEGEVRILASWRRVSAALTGGFRQSLEAHLARRLQRVRLALRGGQGAAAWATMMDRYYSSSDAASVPANVGVGVGIDPFVHGLAEHRDSESVRPIDVAAAGDAGGFYAAGYAAGAENEYGFAASLRRWESRAGVLSRDTSAGAHLRNVTGIRRASHAGGSHVDVSSADNEHVIMSLRNSVERLQEQVAELRRVMAVSVDLQLDTHMFVRQEVAAAMSRAKLTTTESTAIGGGASPSAFHRQRGGSALPLSSTCVVCLEQPSDTLLYGCGHMCACTPCGRMLKADKKSCPVCRAPIRDAVRVFSS* # PASA_UPDATE: g437.t1, single gene model update, valid-1, status:[pasa:asmbl_616,status:12],[pasa:asmbl_617,status:12], valid-1 NODE_1165_length_13437_cov_42.6551 . gene 8364 10851 . + . ID=g437;Name=g437.t1 NODE_1165_length_13437_cov_42.6551 . mRNA 8364 10851 . + . ID=g437.t1;Parent=g437;Name=g437.t1 NODE_1165_length_13437_cov_42.6551 . five_prime_UTR 8364 8482 . + . ID=g437.t1.utr5p1;Parent=g437.t1 NODE_1165_length_13437_cov_42.6551 . exon 8364 10851 . + . ID=g437.t1.exon1;Parent=g437.t1 NODE_1165_length_13437_cov_42.6551 . CDS 8483 10711 . + 0 ID=cds.g437.t1;Parent=g437.t1 NODE_1165_length_13437_cov_42.6551 . three_prime_UTR 10712 10851 . + . ID=g437.t1.utr3p1;Parent=g437.t1 #PROT g437.t1 g437 MHFVASHIPSAVAGDIIIMDLHQALRSIANGVSDYIDTFLGGPQHAIKVVDCGSVAYWDAVPLQSGILLPYALAFASVLIFAIFAVPTIDRAWVGIRVFFRRRNMQEGGVAIKCAMFGVVFAVCAHAFTESVRYFAVEIPNVIGFSLPYYELGPCAVDPFPMGCFQNDYASLLRTPKPQRNHAFTSSCASLLFWHQGLLTTDGAQLVAQMHHFFAIASAVLLIARLAGSSMISLSELATGCGRYIPSRPSSGRGDTRSASLATTLWDAPEFTANADVPGMLWSSVLLKRAIRRGRWDERVRAVLSEIAIPLVRMSSLVFLSCFGVSHMSGLGIILSLTPWCFEICSMAVSAVIAWMPEIAALAMPAAPFLSLLIFARAAEVSPVALFMLRDLPSTFPLVGELLGPIHISRFFFVLVALNASLLVGVLWPNASRSPHDRQPGDTVLGRFLRSCEIFGPLFFTATFMWIRSTRKHRDPPTYEAVASIGTVFVNFWGCAWLILTSAAVGMRFFTGRTAAPTLVDAMEVEDESDGIIQFSRGMFDASIDGVSVTPALAGDNPQYRLRTSHARIINREDAGSNPATVQSDDDLPLSTAPSSERRPRTHGDRDTADTADTAHESHETVRSDESAVADRHQRQGSAGPRPRSSVHDAAPARAGESRDMAEKDPLATRAGAVREGSAGPHGRPEWDCVVCWTARREYAVLECGHFCLCARCVATLRESGSRAVCPTCRTPARDFKRIFIS* # PASA_UPDATE: g435.t1, single gene model update, valid-1, status:[pasa:asmbl_618,status:3], valid-1 NODE_1165_length_13437_cov_42.6551 . gene 233 5252 . + . ID=g435;Name=g435.t1 NODE_1165_length_13437_cov_42.6551 . mRNA 233 5252 . + . ID=g435.t1;Parent=g435;Name=g435.t1 NODE_1165_length_13437_cov_42.6551 . five_prime_UTR 233 327 . + . ID=g435.t1.utr5p1;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . five_prime_UTR 530 795 . + . ID=g435.t1.utr5p2;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . exon 233 327 . + . ID=g435.t1.exon1;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . exon 530 1519 . + . ID=g435.t1.exon2;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . CDS 796 1519 . + 0 ID=cds.g435.t1;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . exon 1838 5252 . + . ID=g435.t1.exon3;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . CDS 1838 4725 . + 2 ID=cds.g435.t1;Parent=g435.t1 NODE_1165_length_13437_cov_42.6551 . three_prime_UTR 4726 5252 . + . ID=g435.t1.utr3p1;Parent=g435.t1 #PROT g435.t1 g435 MWNRYLQTDFVRHNVEPTPWVLPVMRGSIELRTVYAGHKQAKAALISRLSCERAGRRFITRGVDDDGNVANFVETEQALSVDDIVASFVQSRGSVPVFWEQPGVQVGQHKVKLARGFDATVPAFRRHIDHQTKVYGPMMIVNLLGHKEGEKMLSDEFESHVRLVKTEGVRVDIVSFDFHAQCKNGRMDSLNSLLWSGVEGHVSQHGYFVKDGTAVKQRQTGILRTNCLDCLDRTNVVQTYFGLKLLEPQLRILFGENAAQFYSRFDEALKVMWVKNGDMLSQLYAGTSALKSDLMRTGKRTTTGIMMDAAKTVSRTIQNNFMDSSQQEAIDVFLGMRIDASVADALQTEGAGLDPMHKRIAEVLAEREAEFTQWSTATVLVGTWNVNGGKRADADSLVPWLAQKTEDGRLPDIFAIGFQEIVDLTAGNIVAADAANRASWEKAIRSALTETGEPYSPVVSEQLVGVCLFVFARSELLHLVRDVVIDKQKTGMKGYAGNKGGVAIRFKLQSSTICFVCAHLAAGQGNITERNENYHQITRQVSFGKGRTIGTHDYVFWLGDFNYRVDLPGDDVRKLCEAKELTAMLNADQLRTQMQAGKVFEGFEEAPIDFLPTYKYDIFTEVYDTSEKERTPAWCDRVLWKGPAAMIKYSRTELMSSDHRPVSAFFQIAVRTCDEERRRAIRLEAMRALGGLDHTVCARPIDPRVTRADIVHLFEGFGPVVALRRVADTTYVSFASADAAQAACSLSGMIIGDKPMQVTVRQPAAAEQATRDEGLSALIMFDDEDESNLYDGDGDENGIPSSASPNTDRPPSIIFDEASGVPAHAHRLSWGGVDLSALEQRPSTSSVTSVGSTTSNSSAPQRPPPPGQSRDSSGSTGSAPPKRPPPPSAASSAASSTGQSSQQAPPSSPRGPSRPPPPSTQLSGGSASSSASGRVSPSPSPRMAESGSVMPPRPRPPSFVPPSAAAQAEAAIKGNAMPIIPQRPGGRGSKTDLLIDLDHFGGTGGAPPAQPAPLPTSVTPAHTTSTTTSTPATAPASVAGPPRPAPIASNAAATPIPVLAPPRPGPSRPAAQVSQATTAPVLGQVPAPYTPRPAAPAVTPAAVAVVPSAFSSGFGVPMTSAPAPAPVGATADFRAMTAPVVPATASLPLAQAPPQPQQQRVVSQSFNPFDDMDDFGKAQIVPPPKPAPASFVSPFDDDFVPRK* # PASA_UPDATE: g438.t1, single gene model update, valid-1, status:[pasa:asmbl_619,status:12], valid-1 NODE_1165_length_13437_cov_42.6551 . gene 11169 13294 . + . ID=g438;Name=g438.t1 NODE_1165_length_13437_cov_42.6551 . mRNA 11169 13294 . + . ID=g438.t1;Parent=g438;Name=g438.t1 NODE_1165_length_13437_cov_42.6551 . five_prime_UTR 11169 11224 . + . ID=g438.t1.utr5p1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . five_prime_UTR 11459 11472 . + . ID=g438.t1.utr5p2;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 11169 11224 . + . ID=g438.t1.exon1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 11459 11618 . + . ID=g438.t1.exon2;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 11473 11618 . + 0 ID=cds.g438.t1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 11797 11922 . + . ID=g438.t1.exon3;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 11797 11922 . + 1 ID=cds.g438.t1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 12206 12429 . + . ID=g438.t1.exon4;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 12206 12429 . + 1 ID=cds.g438.t1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 12687 12803 . + . ID=g438.t1.exon5;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 12687 12803 . + 2 ID=cds.g438.t1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 12894 12964 . + . ID=g438.t1.exon6;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 12894 12964 . + 2 ID=cds.g438.t1;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . exon 13187 13294 . + . ID=g438.t1.exon7;Parent=g438.t1 NODE_1165_length_13437_cov_42.6551 . CDS 13187 13294 . + 0 ID=cds.g438.t1;Parent=g438.t1 #PROT g438.t1 g438 MERRRSSSYAGDPAFHEEHTHAFPPKALVELHVHLDGSIRTETILHYGKERAVPLPSYNIDELHKFVTLPKGCKSLTEFLSTFAHFTPVFRGCAEAIERIAYEFCEDERRQGIAYAEARYAPHLLSDATLSPADVVRAVNRGFERGQKDFDVKIRSILCCMRHEPAWSMEVAQLAAQFASEGVVGIDLAGDENYPAAPHAPAFDFAKECGVRRTVHAGESGPAANIVEALDLLHAERIGHGYHVLEDEAVYQRVKVSCMLSPS* # PASA_UPDATE: g5226.t1, single gene model update, valid-1, status:[pasa:asmbl_7491,status:12], valid-1 NODE_4631_length_1387_cov_30.7919 . gene 216 1254 . + . ID=g5226;Name=g5226.t1 NODE_4631_length_1387_cov_30.7919 . mRNA 216 1254 . + . ID=g5226.t1;Parent=g5226;Name=g5226.t1 NODE_4631_length_1387_cov_30.7919 . exon 216 276 . + . ID=g5226.t1.exon1;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . CDS 216 276 . + 0 ID=cds.g5226.t1;Parent=g5226.t1;5_prime_partial=true NODE_4631_length_1387_cov_30.7919 . exon 486 556 . + . ID=g5226.t1.exon2;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . CDS 486 556 . + 2 ID=cds.g5226.t1;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . exon 741 828 . + . ID=g5226.t1.exon3;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . CDS 741 828 . + 0 ID=cds.g5226.t1;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . exon 1100 1254 . + . ID=g5226.t1.exon4;Parent=g5226.t1 NODE_4631_length_1387_cov_30.7919 . CDS 1100 1254 . + 2 ID=cds.g5226.t1;Parent=g5226.t1 #PROT g5226.t1 g5226 IAALSPADINFDETLSTLRFADRAKRIKTQAVINENPTEKLIRELKEENARLLAMLKGGAPPGGAPGGTLTEDDMERMRKQLEDEIRSQLHTNEQEMTDMSTVGFNERLKEAQLHVGPALCAIT* # PASA_UPDATE: g5184.t1, single gene model update, valid-1, status:[pasa:asmbl_8379,status:12], valid-1 NODE_595_length_20448_cov_43.8408 . gene 17583 20331 . + . ID=g5184;Name=g5184.t1 NODE_595_length_20448_cov_43.8408 . mRNA 17583 20331 . + . ID=g5184.t1;Parent=g5184;Name=g5184.t1 NODE_595_length_20448_cov_43.8408 . five_prime_UTR 17583 17659 . + . ID=g5184.t1.utr5p1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 17583 18000 . + . ID=g5184.t1.exon1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 17660 18000 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 18202 18325 . + . ID=g5184.t1.exon2;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 18202 18325 . + 1 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 18435 18536 . + . ID=g5184.t1.exon3;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 18435 18536 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 19068 19115 . + . ID=g5184.t1.exon4;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 19068 19115 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 19352 19477 . + . ID=g5184.t1.exon5;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 19352 19477 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 19686 19856 . + . ID=g5184.t1.exon6;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 19686 19856 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . exon 20053 20331 . + . ID=g5184.t1.exon7;Parent=g5184.t1 NODE_595_length_20448_cov_43.8408 . CDS 20053 20331 . + 0 ID=cds.g5184.t1;Parent=g5184.t1 #PROT g5184.t1 g5184 MDLASQPDAVGDSSPSCVIGTPTACATDVVREDAREDASAIVLRSLTVECAAPKEGRLTRKRKRVLAKRQKRREFRAEEDRIQAEREKDPLYIAAKSKEEEAQLLKAEEEKKERDSQYQLWLEREKAFDEKARLRKDAAEREAIKRKLIEEQKRKARESLEKAQAGIDEKRRRTAAEDAKRRQEHAVKEAERRNMSGGGVGAVVLDEWSNPLAPPNAAFSVSMSIADDGGTPRPILTPSRTIGQSGEECQYYAKTGACRYGDRCSRAHTVPMAGRIILLRNFLCLPAPSLPTRTSGASDGSALQPMESTDVHKVFSEFCEDALEEISVAGRVVCLVACCNAEPHIRGNVYVEYETESQALGAVARFDGRFYASRQVTCGLCPAGFNWRQAVCGGCL* # PASA_UPDATE: g5179.t1, single gene model update, valid-1, status:[pasa:asmbl_8378,status:3], valid-1 NODE_595_length_20448_cov_43.8408 . gene 1683 6217 . + . ID=g5179;Name=g5179.t1 NODE_595_length_20448_cov_43.8408 . mRNA 1683 6217 . + . ID=g5179.t1;Parent=g5179;Name=g5179.t1 NODE_595_length_20448_cov_43.8408 . five_prime_UTR 1683 1807 . + . ID=g5179.t1.utr5p1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . five_prime_UTR 1942 2013 . + . ID=g5179.t1.utr5p2;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 1683 1807 . + . ID=g5179.t1.exon1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 1942 2128 . + . ID=g5179.t1.exon2;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 2014 2128 . + 0 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 2260 2386 . + . ID=g5179.t1.exon3;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 2260 2386 . + 2 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 2478 2871 . + . ID=g5179.t1.exon4;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 2478 2871 . + 1 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 3195 3746 . + . ID=g5179.t1.exon5;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 3195 3746 . + 0 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 3875 3937 . + . ID=g5179.t1.exon6;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 3875 3937 . + 0 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 4103 4157 . + . ID=g5179.t1.exon7;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 4103 4157 . + 0 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 4366 4426 . + . ID=g5179.t1.exon8;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 4366 4426 . + 2 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 4626 4750 . + . ID=g5179.t1.exon9;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 4626 4750 . + 1 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 4873 4957 . + . ID=g5179.t1.exon10;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 4873 4957 . + 2 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 5671 5718 . + . ID=g5179.t1.exon11;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 5671 5718 . + 1 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 5857 5955 . + . ID=g5179.t1.exon12;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 5857 5955 . + 1 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . exon 6099 6217 . + . ID=g5179.t1.exon13;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . CDS 6099 6186 . + 1 ID=cds.g5179.t1;Parent=g5179.t1 NODE_595_length_20448_cov_43.8408 . three_prime_UTR 6187 6217 . + . ID=g5179.t1.utr3p1;Parent=g5179.t1 #PROT g5179.t1 g5179 MACLFHTPPGRRWKHDVRVKLSLRNASQSESYDVMVETVTKHIEEIAALKKDNKLLQRENTQLQVEKNTLALQVDKLKEAGDVTVSSAVNARVALLEERLARAQEELMESYKHKGHNAQRVLDLNHAVMVKDEEAKKRESEIAVLQSAVAIHIRQLEDVKGTVAEKDVTIQVLQDELQALQLELLRIEERNRDLERDNKELVERWLRKMNEEAQKINDANAFIEQVSELKKTQDLRDAVSSDHFAAVASSPGGTDIQQQLMQALDSSGTLANGDGASIMSASTSSLPGADAQAVRGRRQSNVGVVVVPTTAVHRIIGHDGDVNCVQFSTNGMRIVTGGNDKKVKVWDAKTGVALITLLGATQSVMSVAFNSKDDLVMGASNDHAVRLWGVQSGRIRHTLTGHIGKVLSAKFCGDNKVVSGSHDRTIKIWDLSRGYCTRTFFTFSSCNDIAMADDDGTGIISGHLDNHVRIWDSRVGDCTNEITGIHTGQITSLDLSADRRQLLTNSRDNTLKLIDLRMFQVVNTFCGEGYRNGMNWSKACFSPDARYVAAGSQDGLVYVWNSQTLKLERQLKDHQGSVSAVAWNPQGHQIASCDKDKMWVLYE* # ORIGINAL: g5183.t1 original gene structure, not modified by PASA NODE_595_length_20448_cov_43.8408 AUGUSTUS gene 15365 17182 . - . ID=g5183;Name=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS mRNA 15365 17182 . - . ID=g5183.t1;Parent=g5183;Name=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 17048 17182 . - . ID=g5183.t1.exon1;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 17048 17182 . - 0 ID=cds.g5183.t1;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 16673 16865 . - . ID=g5183.t1.exon2;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 16673 16865 . - 0 ID=cds.g5183.t1;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 16275 16527 . - . ID=g5183.t1.exon3;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 16275 16527 . - 2 ID=cds.g5183.t1;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 15803 15986 . - . ID=g5183.t1.exon4;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 15803 15986 . - 1 ID=cds.g5183.t1;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 15365 15682 . - . ID=g5183.t1.exon5;Parent=g5183.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 15365 15682 . - 0 ID=cds.g5183.t1;Parent=g5183.t1 #PROT g5183.t1 g5183 MADEDMIAEVKEVPDRGTTGGTKKVYRIAVAAEITDLNAVDQTFKAVGYVRVAWATSMRDATSVDFDEIKDVCPVDPGPLLFLNALETTCTDSSIMCKNGQTYMTVGYEALFGDVFRLQRFPFDRQLLSMVVQTMVSDSNIEYQPLTQEDEPFFSSAQTWFGVLGGAGMSWVSFDPIIGFRTSSDVPNFEVKLRLQRKPQYYIINVSIPLFLLVILSGLAFFLPPDDLPDRLAVVMTLILAAVAFKFVITSYLPKVPYVTLLDTYVIIAFVFLAVIALENALVYIAVDHDIDIRKWDILFAGVVYGCWVLLKVLIMLGERTRVFYEDWEHALNNPADEDPYRYASYNTPMRDMTARLKRD* # ORIGINAL: g5178.t1 original gene structure, not modified by PASA NODE_595_length_20448_cov_43.8408 AUGUSTUS gene 1 1341 . + . ID=g5178;Name=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS mRNA 1 1341 . + . ID=g5178.t1;Parent=g5178;Name=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 1 333 . + . ID=g5178.t1.exon1;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 1 333 . + 0 ID=cds.g5178.t1;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 571 636 . + . ID=g5178.t1.exon2;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 571 636 . + 0 ID=cds.g5178.t1;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 777 1008 . + . ID=g5178.t1.exon3;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 777 1008 . + 0 ID=cds.g5178.t1;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 1127 1341 . + . ID=g5178.t1.exon4;Parent=g5178.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 1127 1341 . + 2 ID=cds.g5178.t1;Parent=g5178.t1 #PROT g5178.t1 g5178 MNCAGIEESQRGLVFKPFMQLNGAARHQGVGLGLYLCSMLAEAMSGSIGFESTYGVGSTFWFEIPYVLGSRDEVSGSPSVSSGSQDGRTVVVEVVDDLPSSVIREMPNCVSALGIKLDEPIEMHEIPSQTVAMAGVDQVRSTVETLPALRHLVCDDGRINRVVLKRYIQGHSADAIVDEAENGHAAVLLASERGYDFIWMDIKMPILNGIEATEQIRRLARHIRTPIIGVTGDVTAEEVSHYREVGMQEVLSKPVAKKTIADIVGTFRKVADISFSLNVAN* # ORIGINAL: g5182.t1 original gene structure, not modified by PASA NODE_595_length_20448_cov_43.8408 AUGUSTUS gene 14090 14767 . + . ID=g5182;Name=g5182.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS mRNA 14090 14767 . + . ID=g5182.t1;Parent=g5182;Name=g5182.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 14090 14348 . + . ID=g5182.t1.exon1;Parent=g5182.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 14090 14348 . + 0 ID=cds.g5182.t1;Parent=g5182.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 14487 14767 . + . ID=g5182.t1.exon2;Parent=g5182.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 14487 14767 . + 2 ID=cds.g5182.t1;Parent=g5182.t1 #PROT g5182.t1 g5182 MDALEEDYLDGVSSGEEGDNGEFYDDAYFETDEEDAQVEGSKDASTGKAAPRKRVPKVTDEELLYDPNEDDKDEAWVLKKFGGGIAGVSSETDAVLNCPCCMTLLCLRCQKHDSFKTQYRAVFVANCLTDKSERLRMRPDENAPEELFHPVRCNVCKTEVGVIDVDEIYHFFHVLASEP* # ORIGINAL: g5181.t1 original gene structure, not modified by PASA NODE_595_length_20448_cov_43.8408 AUGUSTUS gene 12403 13738 . + . ID=g5181;Name=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS mRNA 12403 13738 . + . ID=g5181.t1;Parent=g5181;Name=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 12403 12768 . + . ID=g5181.t1.exon1;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 12403 12768 . + 0 ID=cds.g5181.t1;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 12907 13290 . + . ID=g5181.t1.exon2;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 12907 13290 . + 0 ID=cds.g5181.t1;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 13397 13482 . + . ID=g5181.t1.exon3;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 13397 13482 . + 0 ID=cds.g5181.t1;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 13654 13738 . + . ID=g5181.t1.exon4;Parent=g5181.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 13654 13738 . + 1 ID=cds.g5181.t1;Parent=g5181.t1 #PROT g5181.t1 g5181 MAGRRRDQTVPDIESALCQACQTPFNGVASTPCCGMICEPCVIMCFNSHMHAAIIAAHPIKCPSCRMSMDDAYVGNLVVPELFLAYRYYRAHPTAGHPVPIRDSRTHICPECGDDISVEAREQVAAASNNVDEAVADAVQLARSTLDEVVEAASTALALANGDVWTAVDKFVDGDTCHVGRRHAAVPISCPSCHEESCFSCGWAWESHDGMHCEAFLSMYRADPGAPISGPLGKNFEFYFGFHPDKYERDVPRIAMLRKRDIHNAKLESDLWEALSTRRNYCWECHALNGVGSPGESCTHGVYFSV* # ORIGINAL: g5180.t1 original gene structure, not modified by PASA NODE_595_length_20448_cov_43.8408 AUGUSTUS gene 6395 11578 . - . ID=g5180;Name=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS mRNA 6395 11578 . - . ID=g5180.t1;Parent=g5180;Name=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 11472 11578 . - . ID=g5180.t1.exon1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 11472 11578 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 11193 11350 . - . ID=g5180.t1.exon2;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 11193 11350 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 10940 11050 . - . ID=g5180.t1.exon3;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 10940 11050 . - 2 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 10509 10687 . - . ID=g5180.t1.exon4;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 10509 10687 . - 2 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 10153 10242 . - . ID=g5180.t1.exon5;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 10153 10242 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 9852 9989 . - . ID=g5180.t1.exon6;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 9852 9989 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 9517 9641 . - . ID=g5180.t1.exon7;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 9517 9641 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 9198 9289 . - . ID=g5180.t1.exon8;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 9198 9289 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 8880 9036 . - . ID=g5180.t1.exon9;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 8880 9036 . - 2 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 8542 8708 . - . ID=g5180.t1.exon10;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 8542 8708 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 8085 8424 . - . ID=g5180.t1.exon11;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 8085 8424 . - 2 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 7730 7816 . - . ID=g5180.t1.exon12;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 7730 7816 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 7522 7606 . - . ID=g5180.t1.exon13;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 7522 7606 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 7262 7351 . - . ID=g5180.t1.exon14;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 7262 7351 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 6963 7135 . - . ID=g5180.t1.exon15;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 6963 7135 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 6646 6769 . - . ID=g5180.t1.exon16;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 6646 6769 . - 1 ID=cds.g5180.t1;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS exon 6395 6484 . - . ID=g5180.t1.exon17;Parent=g5180.t1 NODE_595_length_20448_cov_43.8408 AUGUSTUS CDS 6395 6484 . - 0 ID=cds.g5180.t1;Parent=g5180.t1 #PROT g5180.t1 g5180 MTGYLTCTPIAHPIRIDTDVVTCVGWTTGNELFTCGDDHQVFRWNQSREASPVCVLPADTFPADIHWFPAQPGKKQASSDIFALAAADGKYHFVSKTGRIEKTVDAHKGAILSLKWSFDGAALVTAGEDGQVKIWSRSGMLRSVLCQVGVPVYSITWNPDSTQVLYTMGKQIAIKPLQPSSKQTQWKGHDGVVLKVDWNVVNNLILSGGEDRKYKVWDSYGRQLFSSGPHDHPITAVAWAPDGQLFAVGAFNTIRLCDAAGWSYTLEKPNVGSVFSLAWTGDGTQIAGACGSGVVCFAHVVDRRMEWRNYEIIVNEDNRILVRDVLNETKESLDFPDRVIKSSFAFGHLVATTAQQCFIYSASNWNTPHIFDIKDGTICLILQCEKYFLLVDTAVGMQIYTYEGRVVSSPKYSGIRAEHLNKQTVSLSNDTLIVRDRADEKAIHVFEVQTGKEIGEGPLRHTLEISEIALDQCGPATERYAAIVDRNRDLYITPVRRGEASVVKLGTMVSAVAWNDSTNMLVGILDGKFTAWYYPKVAYVDRDIMPATRLERDGSEFGKSPTLITFHGNHCTVRRAEGALITASVSPYPAILHEYAEGGHWEDAVRLCRFVKDEIMWACLAAMAIHGKELNTAEVAYAAINEVAKVQYIGHIKSLPTPEGRAAELALFRRQPAEAESIYLQAGLTYRAIKMHINLCNWERALELAVKHKTHVDTVLAFREKYLRAFNRKETNKKFLQYAQGVTVDWDKISAKIAVEKETEKERPGAKPYS* # ORIGINAL: g3094.t1 original gene structure, not modified by PASA NODE_5764_length_724_cov_50.9014_potentialcontaminant AUGUSTUS gene 1 197 . - . ID=g3094;Name=g3094.t1 NODE_5764_length_724_cov_50.9014_potentialcontaminant AUGUSTUS mRNA 1 197 . - . ID=g3094.t1;Parent=g3094;Name=g3094.t1 NODE_5764_length_724_cov_50.9014_potentialcontaminant AUGUSTUS exon 1 197 . - . ID=g3094.t1.exon1;Parent=g3094.t1 NODE_5764_length_724_cov_50.9014_potentialcontaminant AUGUSTUS CDS 1 197 . - 0 ID=cds.g3094.t1;Parent=g3094.t1 #PROT g3094.t1 g3094 MAATIKIVSIEKPITQLGERASFLINYGPSSGALTNSIRRAIQQRVGCYAIDSYIGKSENKSVYT # ORIGINAL: g12593.t1 original gene structure, not modified by PASA NODE_4776_length_1252_cov_40.4393 AUGUSTUS gene 228 985 . - . ID=g12593;Name=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS mRNA 228 985 . - . ID=g12593.t1;Parent=g12593;Name=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS exon 961 985 . - . ID=g12593.t1.exon1;Parent=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS CDS 961 985 . - 0 ID=cds.g12593.t1;Parent=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS exon 685 840 . - . ID=g12593.t1.exon2;Parent=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS CDS 685 840 . - 2 ID=cds.g12593.t1;Parent=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS exon 228 397 . - . ID=g12593.t1.exon3;Parent=g12593.t1 NODE_4776_length_1252_cov_40.4393 AUGUSTUS CDS 228 397 . - 2 ID=cds.g12593.t1;Parent=g12593.t1 #PROT g12593.t1 g12593 MLRSIEPAVSLQTLQAEIVDVRKGLQQVEDELALCKSKPSKEAEMYEIAMKISAANSHCLQHDFFQQASLKFKELTDLNDRMQKRFEDVVEFFGEDKKTSTAEEFFGLFYVFADEFD # ORIGINAL: g2634.t1 original gene structure, not modified by PASA NODE_2387_length_6452_cov_74.9469_potentialcontaminant AUGUSTUS gene 3980 4348 . + . ID=g2634;Name=g2634.t1 NODE_2387_length_6452_cov_74.9469_potentialcontaminant AUGUSTUS mRNA 3980 4348 . + . ID=g2634.t1;Parent=g2634;Name=g2634.t1 NODE_2387_length_6452_cov_74.9469_potentialcontaminant AUGUSTUS exon 3980 4348 . + . ID=g2634.t1.exon1;Parent=g2634.t1 NODE_2387_length_6452_cov_74.9469_potentialcontaminant AUGUSTUS CDS 3980 4348 . + 0 ID=cds.g2634.t1;Parent=g2634.t1 #PROT g2634.t1 g2634 MRALSALDEIGLAHSLEVGRRPNGLAHSLQPTKSVARTPWEVDVRRNRPRTLCGGGMRPNGLAQLSALDEIGLAQPPEVGMRPNGLPHSLIGRRPTKSVSRTLCKLACEQMVSHNSLEVGMR* # PASA_UPDATE: g634.t1, single gene model update, valid-1, status:[pasa:asmbl_9306,status:12], valid-1 NODE_7725_length_413_cov_48.3639 . gene 7 413 . - . ID=g634;Name=g634.t1 NODE_7725_length_413_cov_48.3639 . mRNA 7 413 . - . ID=g634.t1;Parent=g634;Name=g634.t1 NODE_7725_length_413_cov_48.3639 . five_prime_UTR 412 413 . - . ID=g634.t1.utr5p1;Parent=g634.t1 NODE_7725_length_413_cov_48.3639 . exon 7 413 . - . ID=g634.t1.exon1;Parent=g634.t1 NODE_7725_length_413_cov_48.3639 . CDS 7 411 . - 0 ID=cds.g634.t1;Parent=g634.t1;5_prime_partial=true #PROT g634.t1 g634 NCKVVTWGKKNTHATYWKARGYVTIPESLPKLFNDLAQRYADRPGGYTRVFRLNNRYTTPDEHKELKKKRPYYTSRRDDAEMAVVELVDNGLPPLVLPPSYAAKRAAMEAEKVKAARKLAAQFPPKQADTASEL* # PASA_UPDATE: g11812.t1, single gene model update, valid-1, status:[pasa:asmbl_8589,status:12], valid-1 NODE_6324_length_592_cov_45.6015 . gene 1 388 . - . ID=g11812;Name=g11812.t1 NODE_6324_length_592_cov_45.6015 . mRNA 1 388 . - . ID=g11812.t1;Parent=g11812;Name=g11812.t1 NODE_6324_length_592_cov_45.6015 . five_prime_UTR 388 388 . - . ID=g11812.t1.utr5p1;Parent=g11812.t1 NODE_6324_length_592_cov_45.6015 . exon 256 388 . - . ID=g11812.t1.exon1;Parent=g11812.t1 NODE_6324_length_592_cov_45.6015 . CDS 256 387 . - 0 ID=cds.g11812.t1;Parent=g11812.t1;5_prime_partial=true NODE_6324_length_592_cov_45.6015 . exon 1 132 . - . ID=g11812.t1.exon2;Parent=g11812.t1 NODE_6324_length_592_cov_45.6015 . CDS 1 132 . - 0 ID=cds.g11812.t1;Parent=g11812.t1;3_prime_partial=true #PROT g11812.t1 g11812 RALTAYENNDAKRPVVLLGSGSGGVNELTPLLTNEMIAYGIVRLTDVYEGINTTKFVHIIWIGNDVKPMTKAKISVHKGATDTAFAVC # ORIGINAL: g8677.t1 original gene structure, not modified by PASA NODE_3403_length_3548_cov_48.4771 AUGUSTUS gene 1660 2902 . + . ID=g8677;Name=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS mRNA 1660 2902 . + . ID=g8677.t1;Parent=g8677;Name=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS exon 1660 1738 . + . ID=g8677.t1.exon1;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS CDS 1660 1738 . + 0 ID=cds.g8677.t1;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS exon 1869 1925 . + . ID=g8677.t1.exon2;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS CDS 1869 1925 . + 2 ID=cds.g8677.t1;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS exon 2029 2238 . + . ID=g8677.t1.exon3;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS CDS 2029 2238 . + 2 ID=cds.g8677.t1;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS exon 2310 2401 . + . ID=g8677.t1.exon4;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS CDS 2310 2401 . + 2 ID=cds.g8677.t1;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS exon 2600 2902 . + . ID=g8677.t1.exon5;Parent=g8677.t1 NODE_3403_length_3548_cov_48.4771 AUGUSTUS CDS 2600 2902 . + 0 ID=cds.g8677.t1;Parent=g8677.t1 #PROT g8677.t1 g8677 MHVLAGTPLSLTDLSDACHDMITCRVGTNIDQEQSAMRFCDLLLEFGIPPQRFFDNNPNHGGQGPDNGPILDELRRGQAEINGRLNQIFNRLDQTDNLINTHISETHNLISEMNNHCISAESKARNVRAGTRDKAHDATLDRLPMMAFHPNRIPAELLQTFPVARTLLDRLVAMPWRTRIGTFPDYRRRQWGPQNRVFPLTKASVAEWDALACVRFMVWYGNEMGIEADDDLAVMHVKIIDFPIGN* # PASA_UPDATE: g10493.t1, single gene model update, valid-1, status:[pasa:asmbl_1125,status:12], valid-1 NODE_1299_length_12315_cov_42.6154 . gene 5230 12155 . + . ID=g10493;Name=g10493.t1 NODE_1299_length_12315_cov_42.6154 . mRNA 5230 12155 . + . ID=g10493.t1;Parent=g10493;Name=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 5230 5347 . + . ID=g10493.t1.exon1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 5230 5347 . + 0 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 5545 5687 . + . ID=g10493.t1.exon2;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 5545 5687 . + 2 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 6163 6303 . + . ID=g10493.t1.exon3;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 6163 6303 . + 0 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 6473 6643 . + . ID=g10493.t1.exon4;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 6473 6643 . + 0 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 6810 7129 . + . ID=g10493.t1.exon5;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 6810 7129 . + 0 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 7360 10164 . + . ID=g10493.t1.exon6;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 7360 10164 . + 1 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 10768 10891 . + . ID=g10493.t1.exon7;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 10768 10891 . + 1 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 11060 11219 . + . ID=g10493.t1.exon8;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 11060 11219 . + 0 ID=cds.g10493.t1;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . exon 11611 12155 . + . ID=g10493.t1.exon9;Parent=g10493.t1 NODE_1299_length_12315_cov_42.6154 . CDS 11611 12155 . + 2 ID=cds.g10493.t1;Parent=g10493.t1 #PROT g10493.t1 g10493 MAEVRRHVRSYLEDTLNKLAGEASGSKLKHLKECCQSVLAELKAAKGAGTTTATEWEDIRRFYLVPFKLSCETKAPKIIGIAVEGLQRCFGLGVYPRTDVVDRDAGFEKQLVELLVTCLNNTSISDDTALQTMKVLIVLVVSPALERHGAELVGMIQTYCGLFLRTKNLAVRTTVRAGLTQLLIWTQRKGQIAEVDALESQSGSQLAPTTPTQTKGELDASLRSASSETFEADRSVRRAGSLELMATFAAKNSSADLRLSSSLGAGGYVSGEGDTALEFDGTLAEDCIALFKYLQSIAEVKSKDNVSKALAADVVLMTLRNLTRPLHKDARYIDFLKNHVMPILVACSSAPTKEGFRALFGAYAELITYPIPSLRDDLSRLTRDFLVRPLASGALSDAAAVEHRIDILRAIGVVLSSPALSETLCTGLGSIDPSLLSEFVSSATSVCHRAPREVKEGVSRVQMACLDVIAASCRSVNSFGAPCIRERREGGALNVFATSGTRLRFNSGGSVTGSHIDHDAPNVDLLSSPTPALPRIHPTTNAETFVAAVAEIIPALLECSQPSQVDELVEKFASVVTRGGEALDLALPNADAAYMIAFGVLNLSMELHGHVTAVCGKAVRRRHLSNRWFVAAINADPSLPREIPIEWLGKAYAACSSQDILTLRGFDARVHGASGLSRLMVRQVRHYFDWTAASSPRLNEGASAAKMGDLPARGRLSAVVGMSADTVSVASPATTRALNASGSSPTLPQTEDARWLRFVQQSSMVIELSTPALTYMLDPRVGAETEPYGFATEVACVAAALAITANNEQALPVLIEAVTAVSFSSEGFDGATRRLNALRSFLAFALSHGTYLGTPWVPIHRCMSYYFRYSNDAADSSLTIALAKADEEKEKEKEKEKEKDSRPAALRRLMRRNSSKASLSDRAAPDEDTVLEKWVALIETTPSLPFPSIAYFMDALAIVAMEELRERPAPRVRALCTMCRVAVLNAGRQLLEWSRLWSSLSSIMHVAFKNANTDAVLPAVEALLTVIDVRLSRRELDGYGGKARLFAPFAELSIGNDETGLREFAVKRLAQIVGSHAPLVRSGWSTLFPTLTQMARRGIRFEDESRPPVLSVLEQLVGSDPEVLLDAGMEAIRCLVGMCRDRANRSGEQSVDLLVSLLENLAKLQTDAVERGRHATVEESEELWSSVRLKFSEFDPNPSADLAARLGFSGAWRYVVEGLVQAVFECNPEAQSSVIDTLFKVLREHGELMPVRFVETFFSVGLMTMLDDLTRHKQRGNKDRSDRENNFRRALSQTVSFFGILSKRITRERQDQLFDLLLGFIQNNIGGEKEKTARAATVALRGFITSCASLFEAREWDAIVNAVAKACVQTSPPQLWVMLPGDFAAVNKTRKLDALHERVFSVDGGSVSADPMASNAGDQLNGTKEKTQRQKKRSSIVRTPTPGDASTEPTNPYHSVLVRLATHLSLLSLVGDLLSPSSQNDEPGKFGGCAIVFGVGHNIPHPSLALCT* # ORIGINAL: g10492.t1 original gene structure, not modified by PASA NODE_1299_length_12315_cov_42.6154 AUGUSTUS gene 1190 4459 . + . ID=g10492;Name=g10492.t1 NODE_1299_length_12315_cov_42.6154 AUGUSTUS mRNA 1190 4459 . + . ID=g10492.t1;Parent=g10492;Name=g10492.t1 NODE_1299_length_12315_cov_42.6154 AUGUSTUS exon 1190 4459 . + . ID=g10492.t1.exon1;Parent=g10492.t1 NODE_1299_length_12315_cov_42.6154 AUGUSTUS CDS 1190 4459 . + 0 ID=cds.g10492.t1;Parent=g10492.t1 #PROT g10492.t1 g10492 MFAASPPVYGPTTTVTATPANAALPHAPPPPSSKSPSSYLERATLSHSVEHIINVPVGDVASIPAVGSILNRSHELNGTYWRAAPRNRPVAVTFRKWARRVHVAILVQALVVAALFGIHTLFVMQSNADLCAEHEATEAALDVHVTLLVSADDANAAAAHSDDTIQLAIVDTGSLDTLTNEQLSNNPNEASLLSQHNDPPPTGNNAGVVVSIDDGDAPAVDSADTAAEASESANRPSRELFTSSSQSEECDTLVTSTASMPSFSLANSSARSSEPLVSFIIPCFNGFPFLPDALSSILAQTYRNIEVIAVDDGSTDATLAYLHETRMKDSRLFVLALEHKGLPAALNAGMERARGDFVTWGSSDNIYLQNFAETLVDLLTEYPEAGFAHGQHTFILDNANLPEPNSKQKYNFDTMAFDFLFHWKGLAAFMWRREVAVEVGAFNEGLHGVEDWDYWMRILEINPFHPVSRRVLYYYRLHGMQMTKKIEAENGYSALEASLVRSLVARHGGRIDHNKLVPIAALTLDKRRSEAISTFMVGEAALGLRPQVREAVTERDLHKDLYDRSTAYDPSFYSAKECVEVLNGRMFPSGVRYCHRYALYARFSSMLTGTTVPPRNTFLNKCGLLGQSSWVRATTECNYDAHVSTFVQEEIMAIADEWILQMTYHHVFPARQPIRKLVIFVESDLPRDLGVFNPFGYFRQLVVFVPSTTVSGVCTPVCTSTSSVCVVHMGATDTAVQMHTHVQKASLVRAYGLAWACERALEVSTGGAPVVCSVGHVLDGRPPVSDEGYAFARRADMIIAGSSSAANRLLAAGIPSSKVKVVADGIPSTAVIPRPAVVAPNAPTEHASISADSSTVNSVSDEYRVFVDATGKGGDSVIPTDAARVVINALPSLPDNYVATVIIDSNEDRSFLRKVVNEQGVSSRVSFVESNTVLRGFAVLDPDHTAVLSVGEWRAAPNYEPTTVDLLAMAAGIPVLACGTGSQSSEEVGDNAEKRATPSPSEQEAVRFAATCYDASMMPAMIRETFEMPILSAVRRRLGEEVARRRTSESMARLELFVYRLTMRQAQGTTMDITDTELLNDPIPGLRIF* # PASA_UPDATE: g5585.t1, single gene model update, valid-1, status:[pasa:asmbl_2931,status:12],[pasa:asmbl_2932,status:12], valid-1 NODE_1891_length_8716_cov_36.6219 . gene 255 8038 . - . ID=g5585;Name=g5585.t1 NODE_1891_length_8716_cov_36.6219 . mRNA 255 8038 . - . ID=g5585.t1;Parent=g5585;Name=g5585.t1 NODE_1891_length_8716_cov_36.6219 . five_prime_UTR 7645 8038 . - . ID=g5585.t1.utr5p1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 7570 8038 . - . ID=g5585.t1.exon1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 7570 7644 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 7119 7277 . - . ID=g5585.t1.exon2;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 7119 7277 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 6736 6774 . - . ID=g5585.t1.exon3;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 6736 6774 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 6287 6499 . - . ID=g5585.t1.exon4;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 6287 6499 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 5740 5821 . - . ID=g5585.t1.exon5;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 5740 5821 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 5298 5395 . - . ID=g5585.t1.exon6;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 5298 5395 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 4904 5056 . - . ID=g5585.t1.exon7;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 4904 5056 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 4530 4577 . - . ID=g5585.t1.exon8;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 4530 4577 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 3878 4030 . - . ID=g5585.t1.exon9;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 3878 4030 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 3365 3544 . - . ID=g5585.t1.exon10;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 3365 3544 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 2959 2992 . - . ID=g5585.t1.exon11;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 2959 2992 . - 0 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 2658 2684 . - . ID=g5585.t1.exon12;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 2658 2684 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 2311 2421 . - . ID=g5585.t1.exon13;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 2311 2421 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 1856 1984 . - . ID=g5585.t1.exon14;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 1856 1984 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 1410 1508 . - . ID=g5585.t1.exon15;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 1410 1508 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 1051 1128 . - . ID=g5585.t1.exon16;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 1051 1128 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 605 739 . - . ID=g5585.t1.exon17;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 605 739 . - 2 ID=cds.g5585.t1;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . exon 255 360 . - . ID=g5585.t1.exon18;Parent=g5585.t1 NODE_1891_length_8716_cov_36.6219 . CDS 255 360 . - 2 ID=cds.g5585.t1;Parent=g5585.t1;3_prime_partial=true #PROT g5585.t1 g5585 MDYVEAIYDYAGAHGSTDMAFKKGQTFRVVSRENEQWLKVEIEGREGYVPANYVQPASVPKPGTPEAPKRSEALSKQSSLASLDITGEEGPLPDDWKEATDPRGLKYYYNKRTKETSWKRPTGASGASAESPAPVTTPAAAPQPQAPPTIPVPVATPAGMSQSPSAKRISMLPVVPPVIAPVVAPTPLIKTPMEEEWVEATDPNGNKYYYDRVSKQTSWTLPPGAVTSDEQLRRPSVAPPPVSSPSTQPRKASAATEQQLAPPQAAQPAQQSPTQSRKLSGVEDYVVDGSQVLKEGTLARKAVTDMGGKKAGDRSWSEGFAVLRGTVLEFYKDQKSVGQKLQQVIPLDGGSADIAYGYTKKKFVFSVTTVSGSQTYLLADSHEAMVDWIMNIQKALTVKRAIVHSLTTIALFDKGTLTLKGKQDVKKMKEDEKQKKKDDDKKKKDDKPAPALKKAKQTEVVDINDNDSADVKNKKIKNRLVNFFQNRPSMEALKAEGLIQEQTFGCALYKLAEKERVTVPTFVQKAVAAIERKGLVMVGIYRLSASTTLVQKMRIAVNHEEPVDFEDPMWEDINTTAGTLKLYFRELPEPLIPYATYPRVIDVMKTCDVSERAATLKRILYEMPEPNLHTLKFMMVHLA # PASA_UPDATE: g10210.t1, single gene model update, valid-1, status:[pasa:asmbl_6938,status:12], valid-1 NODE_4088_length_2205_cov_37.4779 . gene 41 1843 . - . ID=g10210;Name=g10210.t1 NODE_4088_length_2205_cov_37.4779 . mRNA 41 1843 . - . ID=g10210.t1;Parent=g10210;Name=g10210.t1 NODE_4088_length_2205_cov_37.4779 . exon 1286 1843 . - . ID=g10210.t1.exon1;Parent=g10210.t1 NODE_4088_length_2205_cov_37.4779 . CDS 1286 1843 . - 0 ID=cds.g10210.t1;Parent=g10210.t1 NODE_4088_length_2205_cov_37.4779 . exon 613 1101 . - . ID=g10210.t1.exon2;Parent=g10210.t1 NODE_4088_length_2205_cov_37.4779 . CDS 613 1101 . - 0 ID=cds.g10210.t1;Parent=g10210.t1 NODE_4088_length_2205_cov_37.4779 . exon 41 272 . - . ID=g10210.t1.exon3;Parent=g10210.t1 NODE_4088_length_2205_cov_37.4779 . CDS 41 272 . - 0 ID=cds.g10210.t1;Parent=g10210.t1;3_prime_partial=true #PROT g10210.t1 g10210 MSRGLPHLQSKLVIKLKVSEDRSVRVVLPREEIVSQMNYDQYTSVGEALVAILGQCNVSGVNYGMYHPREDIWLEDGELLSAYGLNSGDTIECREKRQAEQGTSRIVLAIHIPSMNVTLKMSAQYTMTVTEVITTLLRKELLKKAPIRDASQYGLVLLPNHTGGKRNRPIWMEDYKFLASFNMGMEEKLEYRSKFEPFHVDIFPRSLGSLWHKSSKHKVCQIDADDRATMRDILEMSCASLSLPDVFDYGVHGHDDGEIPMTVPDTLQNGEESNSGTSGQGSAVPPVIGTLTRQQTTLSTFSGISSFSSATGAIAASVLAAGGGADCEKDGKHVKMRENRVWDVYNKHKDTFVVKSIKRRVQVAVNDVVSAKRKDKDKEIDIDDLTTFFIDFFEPFAALVELVRRRYGFHPDRTPKVFFIEGEDAF # ORIGINAL: g790.t1 original gene structure, not modified by PASA NODE_1045_length_14434_cov_41.7881 AUGUSTUS gene 3217 7606 . - . ID=g790;Name=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS mRNA 3217 7606 . - . ID=g790.t1;Parent=g790;Name=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 7341 7606 . - . ID=g790.t1.exon1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 7341 7606 . - 0 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 6163 7159 . - . ID=g790.t1.exon2;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 6163 7159 . - 1 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 5478 5912 . - . ID=g790.t1.exon3;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 5478 5912 . - 0 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 5108 5284 . - . ID=g790.t1.exon4;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 5108 5284 . - 0 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 4780 4923 . - . ID=g790.t1.exon5;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 4780 4923 . - 0 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 4382 4581 . - . ID=g790.t1.exon6;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 4382 4581 . - 0 ID=cds.g790.t1;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 3217 4216 . - . ID=g790.t1.exon7;Parent=g790.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 3217 4216 . - 1 ID=cds.g790.t1;Parent=g790.t1 #PROT g790.t1 g790 MLALIVSGLRSFVADRFGERARRVVDERALALADKLKDDPSSWGTCPDALSAAYVSVVADFANVQSGVQVLELLGQYWMDFVSRNGLGKLFQQLGGSIREALRHLSRLHDDLNHALADDRIHLPALYLIDTDGVNFELHAEFGAAGCAPILKGIVDGLARTYIKASNVDVKALPSAADHPLVAVVDVCIRPNDKRRGSLMPIPPGSLRICGDKVEEIFPFYLSVNYKLRISQMGAALQRILPDLMLGMNLFDAFELNSPRLAFSDYTALVDHGKCLFSVSRGGVELVGQMLHLPEDEVVAFLATPRLGSLRAAAAAQSSSSSPLSKCSAFSLMSLPIHSRLFESPFGDEDFSALEETSAPESVPAGSAALASVVQMPDCELIWTLSQGLQKKKSKEDLLASMKKVTKFFGEAEPSIDHNVQLSQGQMDLTAPVEKMLLVLQRLKSSVDVDLASDIDFVIGELTSNYDVYVPNLEARLSMDSSMDSEFSDYLESFFPRQASLKFRQSSTLKRSSKSSLKSLLNIAESSETGSQEGALEEGGGGNISRQPSTRSNHSAAGVIAVPSVKAQDVSLPSSRSNSIVGVSAQVDREGYMTKRGGRGVMKNWRRRFFVLSGSLIYYYKNSRKDMKPLGVIDLQEFNTCRAVKRKDVICMEIAQAKIDTRAYYAHADTEIETREWIAVVSTRIAELKAEAGNSGSIESFAERRKRAFSESSNEKAPVSDDDDDDDDSEEGGKTPESVRKYRSSNLAAATANGVEPAPAQPPPTQPPTQPADSTTPVPTISTSDASVSVVVAAVPRPLAPSEFDSASLQLRTGAMEDLDFDVFLAHELTGGGSLRWVTREILGKFEVTSKLGLDTARLDRFLMSIERGYKAENPYHNAIHAADVTQTLYYFLSTLGLSQYLSDLDIFSAVIAATIHDYMHPGSNNAFQINTCSPEAMLYNDQSVLENMHLARAFEVISRDDCNIFSSLSAADARHARGVIIQMVLNTDMSLHFELLGKFKGALPSHELKPDETLPNSTILLILAMALHCADVSNPVKRRELYMEWARRVMDEFFNQGDISAAAYAVSCALF* # PASA_UPDATE: g792.t1, single gene model update, valid-1, status:[pasa:asmbl_173,status:12], valid-1 NODE_1045_length_14434_cov_41.7881 . gene 9545 14130 . - . ID=g792;Name=g792.t1 NODE_1045_length_14434_cov_41.7881 . mRNA 9545 14130 . - . ID=g792.t1;Parent=g792;Name=g792.t1 NODE_1045_length_14434_cov_41.7881 . five_prime_UTR 13687 14130 . - . ID=g792.t1.utr5p1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 13457 14130 . - . ID=g792.t1.exon1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 13457 13686 . - 0 ID=cds.g792.t1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 12994 13250 . - . ID=g792.t1.exon2;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 12994 13250 . - 1 ID=cds.g792.t1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 12551 12773 . - . ID=g792.t1.exon3;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 12551 12773 . - 2 ID=cds.g792.t1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 10394 12330 . - . ID=g792.t1.exon4;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 10394 12330 . - 1 ID=cds.g792.t1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 10060 10189 . - . ID=g792.t1.exon5;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 10060 10189 . - 2 ID=cds.g792.t1;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . exon 9545 9860 . - . ID=g792.t1.exon6;Parent=g792.t1 NODE_1045_length_14434_cov_41.7881 . CDS 9545 9860 . - 1 ID=cds.g792.t1;Parent=g792.t1 #PROT g792.t1 g792 MSVIPPVDGAGGAPPSTHTAHNAHAHTHSEDGQGCTLFVGNLPYDMGPEALIGLVSTVVPVVSASLAEKCGKSLGYGFVELPSREDAQRAVARLNTARVGGRSVIVKHAAVPAALQSQFRFVGADGGAVYDRRVSLCDANGEHAGDVLRVGLSMGRPLESGNDILSRFSAAVLAISLCAASTKHVEDVRASTSSALARLCKCETGPYFVVDRKSGLQTLGVDSSANPDTPNLEAFARTLLSGSEVQVAGPPSLKYDAVFLSVCRDEATVDCVYSVVSLSGPVAADVVAAATLFAQHATTALATATRRIAEAERRLMAENMLSLLEDVYRELDSRVLTAKLLAYASHLVSADRCSLFLIDEAADELYAEVFDCEGSANGVSPGARDGRIRFPRSKGIAGYVARTGEPLNIADAYSDARFNTEVDKATGYRTRSILCMPIRNQHGTIIGVAQLVNKTTGSFTFDDERLFSRFLLYCGIALQHARSFELERAMVAEHEVLLSVAQGVFGHVDVDSILKHVMATAGTLVRSDRCSVFLVDKPRDELYAKVFEVSSEAHPSAVERPSRRDSTDDGDAKKQSQREVRFPLTQGIAGFCARTGKTLSIRDAYQDPRFNPAVDKETGFKTRTLLCVPIVCGDGEVVGVAQLVNKAGGDFFTPQDERVLRCFSVFCGIALKNAQLYDKAVESERRARLVLEVMSYHAQAPEDELTQLSSAPPAPAASFGVDKFTCDPRGMAWLDQCRAVEAMFREFGYLEQYRVPIDVFRRFVLTVRRNYRQVLYHNWDHAFEVTQSCYALMKAHEGKLAGSLRQHELFGMLVGVLVHDIDHRGVNNSFLRTAEGELWSLYGDSSILEKHHFSHFVSLVSSDNLNIFQGLASQETYRDILDHIKACILHTDIANHFVNRTEFKGILAETSGMLDRRNVRHRRSLSGMIMTAADISAITKPWEQQQRVAELVYGEFFDQGDRESQMGTVPLEMMDRHRASIPKLQLGFIDYICMPCFDLLARYLESAQIMVDGVRNNRAMWQQLHNEACV* # PASA_UPDATE: g787.t1, single gene model update, valid-1, status:[pasa:asmbl_171,status:3], valid-1 NODE_1045_length_14434_cov_41.7881 . gene 619 1504 . + . ID=g787;Name=g787.t1 NODE_1045_length_14434_cov_41.7881 . mRNA 619 1504 . + . ID=g787.t1;Parent=g787;Name=g787.t1 NODE_1045_length_14434_cov_41.7881 . five_prime_UTR 619 777 . + . ID=g787.t1.utr5p1;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . exon 619 856 . + . ID=g787.t1.exon1;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . CDS 778 856 . + 0 ID=cds.g787.t1;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . exon 1073 1184 . + . ID=g787.t1.exon2;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . CDS 1073 1184 . + 2 ID=cds.g787.t1;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . exon 1306 1504 . + . ID=g787.t1.exon3;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . CDS 1306 1432 . + 1 ID=cds.g787.t1;Parent=g787.t1 NODE_1045_length_14434_cov_41.7881 . three_prime_UTR 1433 1504 . + . ID=g787.t1.utr3p1;Parent=g787.t1 #PROT g787.t1 g787 MSVPTYTKGSSKPRPPERGSFPLDHDGECKDSMRVFMDCLARGHYDSSLCRAESKAYLECRMDRDLMAREDLNKLGFGGEARPTDTNAAPPFKPDGPSSQKRTNP* # PASA_UPDATE: g788.t1, single gene model update, valid-1, status:[pasa:asmbl_172,status:3], valid-1 NODE_1045_length_14434_cov_41.7881 . gene 1679 2465 . + . ID=g788;Name=g788.t1 NODE_1045_length_14434_cov_41.7881 . mRNA 1679 2465 . + . ID=g788.t1;Parent=g788;Name=g788.t1 NODE_1045_length_14434_cov_41.7881 . five_prime_UTR 1679 1737 . + . ID=g788.t1.utr5p1;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . exon 1679 1746 . + . ID=g788.t1.exon1;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . CDS 1738 1746 . + 0 ID=cds.g788.t1;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . exon 1888 1963 . + . ID=g788.t1.exon2;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . CDS 1888 1963 . + 0 ID=cds.g788.t1;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . exon 2146 2465 . + . ID=g788.t1.exon3;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . CDS 2146 2273 . + 2 ID=cds.g788.t1;Parent=g788.t1 NODE_1045_length_14434_cov_41.7881 . three_prime_UTR 2274 2465 . + . ID=g788.t1.utr3p1;Parent=g788.t1 #PROT g788.t1 g788 MSNKHEFYVAMTCEGCSGAVTRVLKRVEGVQDIQCSIPEKKVVVSGSADKDVILAAIQKTGKEVRYVGTA* # ORIGINAL: g791.t1 original gene structure, not modified by PASA NODE_1045_length_14434_cov_41.7881 AUGUSTUS gene 8836 9291 . + . ID=g791;Name=g791.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS mRNA 8836 9291 . + . ID=g791.t1;Parent=g791;Name=g791.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 8836 9291 . + . ID=g791.t1.exon1;Parent=g791.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 8836 9291 . + 0 ID=cds.g791.t1;Parent=g791.t1 #PROT g791.t1 g791 MIVSLLTSHCWTHLQLRATHRHSHMAEGNMITLDEAWAALGRTLRQASAICDGYHASSCDGACSGRGHCHVHRYHCDACRETRHPPHPGACELSMPAGVYTVTASADGYESRSHVLRVRDGTPATIHFALRPSHNKTRDTSYYYPRESMHS* # ORIGINAL: g789.t1 original gene structure, not modified by PASA NODE_1045_length_14434_cov_41.7881 AUGUSTUS gene 2862 3101 . - . ID=g789;Name=g789.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS mRNA 2862 3101 . - . ID=g789.t1;Parent=g789;Name=g789.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS exon 2862 3101 . - . ID=g789.t1.exon1;Parent=g789.t1 NODE_1045_length_14434_cov_41.7881 AUGUSTUS CDS 2862 3101 . - 0 ID=cds.g789.t1;Parent=g789.t1 #PROT g789.t1 g789 MSLTPLHMERKLNMAISPFMDRNSATMAKCQSSFIGYIVEPLYKLYATFLPQLGDSCLVHLRDNRRIWDDSTTPVDPHH* # PASA_UPDATE: g4117.t1, single gene model update, valid-1, status:[pasa:asmbl_6974,status:12], valid-1 NODE_4103_length_2180_cov_31.6219 . gene 159 1929 . - . ID=g4117;Name=g4117.t1 NODE_4103_length_2180_cov_31.6219 . mRNA 159 1929 . - . ID=g4117.t1;Parent=g4117;Name=g4117.t1 NODE_4103_length_2180_cov_31.6219 . exon 1123 1929 . - . ID=g4117.t1.exon1;Parent=g4117.t1 NODE_4103_length_2180_cov_31.6219 . CDS 1123 1929 . - 0 ID=cds.g4117.t1;Parent=g4117.t1 NODE_4103_length_2180_cov_31.6219 . exon 680 832 . - . ID=g4117.t1.exon2;Parent=g4117.t1 NODE_4103_length_2180_cov_31.6219 . CDS 680 832 . - 0 ID=cds.g4117.t1;Parent=g4117.t1 NODE_4103_length_2180_cov_31.6219 . exon 159 266 . - . ID=g4117.t1.exon3;Parent=g4117.t1 NODE_4103_length_2180_cov_31.6219 . CDS 159 266 . - 0 ID=cds.g4117.t1;Parent=g4117.t1;3_prime_partial=true #PROT g4117.t1 g4117 MPQNALVGLITFGTTVQVHELGYSECAKSYVFRGTKEFTAQQIQDLLNLNPSPQAGGQRPAQQQPGQPPQAAQQPPPFAGARFLQPVQECDMALTGIIEELQRDPWPVANDKRPLRSTGVAMSVAVGLMECLFPNAGGRIMLFIGGPCTQGPGIVVGNELKEPIRSHHDIEKDNAKYAKKASKHYEALAKRAANNGHTVDVFSCAFDQTGLMEMKSLVNSTGGHMVMGDSFHTSLFKQTFQRVFAKDARGDFTMAFGATLDVQTTKELKVCGVIGSCVSLNKKSHHVSETEFGLGGTSAWRICGLDSGSTFGVYFEVVSQNAQPIQPGQRGLIQFTTLYQHSSGQRRLRVTTVARG # ORIGINAL: g1990.t1 original gene structure, not modified by PASA NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS gene 107 4369 . - . ID=g1990;Name=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS mRNA 107 4369 . - . ID=g1990.t1;Parent=g1990;Name=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 4349 4369 . - . ID=g1990.t1.exon1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 4349 4369 . - 0 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 3975 4216 . - . ID=g1990.t1.exon2;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 3975 4216 . - 0 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 3779 3868 . - . ID=g1990.t1.exon3;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 3779 3868 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 3184 3255 . - . ID=g1990.t1.exon4;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 3184 3255 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 2970 3041 . - . ID=g1990.t1.exon5;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 2970 3041 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 2582 2692 . - . ID=g1990.t1.exon6;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 2582 2692 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 2371 2445 . - . ID=g1990.t1.exon7;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 2371 2445 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 2182 2259 . - . ID=g1990.t1.exon8;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 2182 2259 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 1853 2016 . - . ID=g1990.t1.exon9;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 1853 2016 . - 1 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 1462 1755 . - . ID=g1990.t1.exon10;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 1462 1755 . - 2 ID=cds.g1990.t1;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS exon 107 1318 . - . ID=g1990.t1.exon11;Parent=g1990.t1 NODE_2935_length_4700_cov_29.2251_potentialcontaminant AUGUSTUS CDS 107 1318 . - 2 ID=cds.g1990.t1;Parent=g1990.t1 #PROT g1990.t1 g1990 MGNELLHTKLATAAPAVQGTTLPPEDAIQPANAVMGNDRTKRGDAGSSCCLENMDSKCLCFGIANVTTRGTTSLTAVCGSLINSGTTLLFSGRCYGDYLPDVLAANKELLSLPDINEVDLSSNDIQDLQANAFNGMRALTHLNVADNKLGVLPDFLFKDNTLLRSIPDQFGSAIANPNRSLAGNPIGLLPGGLFISNVGLKSMNLSNMMLRDVGEGIFPSSAVPLEMLDLSENVLWRVLTQNLPKCNASTNVKLVLPPPYVGNNNGFCPCVDMNIDCDYKCTCGGGEFNRACSNTDDGLGRACLVDKVGPGLKLQRPSDAFPTYTTMETLAEGTVCACLVANYRGSESRGIEPLPELADKSYEHVQAFCSAMIKTAPRDVESISVQEVAVGQEGCNQLCQNDGNCQAVTYIEMSASCIAFGNSSGTFPSRQWTRLPSLANNRRRRRSTPMVWATVGSDRSSQIMIEASFRPPVSGDYSFAIPTGARFLIYQESNNGSEIDFTAALNEVTGIKSGCPDGENWRCGGLCCPPAFHLLIADNQQFDFNSPTVWESMRGDPYGVDNCRCVNPAHLPVSGSVPKCGDVSQQLPSIVESALGKWVGDGKSIFRYRLRGDYCYDPSDPKFSVPFSVCQAIGDVHIVGALHTLDGKDWRQVPTCKIFLRRNVTLAYKVRLLLKGPLSSWVPMHLLSPNWALVESAQARWTGFSLECDVPYNYGMFGELATRFESDPGDVDTFAYIPLVASEPVIGGMDRLYLARCASPIRTEKPAEELPFGFTTSMVSAQFFGYTVSPASAADFDKTVLGAEKQTTLL # ORIGINAL: g5273.t1 original gene structure, not modified by PASA NODE_1593_length_10313_cov_42.7602 AUGUSTUS gene 1129 3710 . + . ID=g5273;Name=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS mRNA 1129 3710 . + . ID=g5273.t1;Parent=g5273;Name=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 1129 1218 . + . ID=g5273.t1.exon1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 1129 1218 . + 0 ID=cds.g5273.t1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 1431 1780 . + . ID=g5273.t1.exon2;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 1431 1780 . + 0 ID=cds.g5273.t1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 1940 2090 . + . ID=g5273.t1.exon3;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 1940 2090 . + 1 ID=cds.g5273.t1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 2265 2473 . + . ID=g5273.t1.exon4;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 2265 2473 . + 0 ID=cds.g5273.t1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 2910 3028 . + . ID=g5273.t1.exon5;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 2910 3028 . + 1 ID=cds.g5273.t1;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 3187 3710 . + . ID=g5273.t1.exon6;Parent=g5273.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 3187 3710 . + 2 ID=cds.g5273.t1;Parent=g5273.t1 #PROT g5273.t1 g5273 MLETRLFNVVAMGMAFMLIYTSFQTSQSYQATVLKDLGFSENLGFYGLSVINCSFAVSNFFATLIVLRMGPRVAMVFGATFIAIFIASFIRVIEPVFYVTSALIGFGASVLWTAQGTLISSCSDEATRGRNVGLFWTLYQFSVLIGSIIAYFIVPDDNNISTSTARTLYAALLGVCVAGIAVLFVLRPVPILWHEMVLPFRSSPRISLQYLQSPMYLSSLTGPPQSENGHQPVLESIADTFRMLTRREIIGMATIMIYTGLAPSFFAAKYPGMVGGNDSDCQDLPHTFNPRFISFSMMCVGTSEIIGGLSLGYVSDRLGRIPVLAFGAVLHLCAYAGVYVNMVRRPFEPQPSLALVCFFLLGLGDSAFQTQVYATLGSVFPSESGPAFALFMFFQTIASAAAFFYSGHLAIVGQLAILVVFVVLGASTHAMVERHRLLDVQSGSYKPLLDSAEIDAFEPINSTIDDDAELKGENGAVHTT* # ORIGINAL: g5274.t1 original gene structure, not modified by PASA NODE_1593_length_10313_cov_42.7602 AUGUSTUS gene 4494 5240 . + . ID=g5274;Name=g5274.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS mRNA 4494 5240 . + . ID=g5274.t1;Parent=g5274;Name=g5274.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 4494 4854 . + . ID=g5274.t1.exon1;Parent=g5274.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 4494 4854 . + 0 ID=cds.g5274.t1;Parent=g5274.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 5020 5240 . + . ID=g5274.t1.exon2;Parent=g5274.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 5020 5240 . + 2 ID=cds.g5274.t1;Parent=g5274.t1 #PROT g5274.t1 g5274 MKVSVAILAVAIAILASASALPVQVSLASTVNELKVDQYLGRWFQVASSFVVVNAFEKDAVCATADYSSRDDGKIGVVNTQRLKTVDGTIANITGYVYNTDANQPGQFKLHLGTVPVDGSYWILALGPVVNGKYQYSIVSEPYSIQLYILVRDVADYESNYAQEVASVVEKLGFTHFWNKPIPTLQKGCTYPW* # ORIGINAL: g5275.t1 original gene structure, not modified by PASA NODE_1593_length_10313_cov_42.7602 AUGUSTUS gene 5829 7144 . + . ID=g5275;Name=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS mRNA 5829 7144 . + . ID=g5275.t1;Parent=g5275;Name=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 5829 6131 . + . ID=g5275.t1.exon1;Parent=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 5829 6131 . + 0 ID=cds.g5275.t1;Parent=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 6290 6535 . + . ID=g5275.t1.exon2;Parent=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 6290 6535 . + 0 ID=cds.g5275.t1;Parent=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 6701 7144 . + . ID=g5275.t1.exon3;Parent=g5275.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 6701 7144 . + 0 ID=cds.g5275.t1;Parent=g5275.t1 #PROT g5275.t1 g5275 MASLRLVRPIISGAPVRYFCSSAAHSSIIGNDANNVSDEERSMWRDNGATAGSKDEVLYEVDGCVAKITLNRPDRMNSITSTMPFRLSNAVARADRDDRVKMILLSGAGKGFCSGYDLKLFAEATSPCLGSQGMPWDPLVDYRFMNECTQSYMSLWRAMKPVICKVHGYAVAGGSDIALCSDIIVMADDARIGYPPARIWGCPTTFMWVYRLGAERAKRMLFTGDAITGKEAAEIGLVGQSVPAASLDAAVEEIIARMRDVPANQLAMHKLVVNQAYENMGMRTTQMLATLMDGIARHTPEGVAFKKIAEEHGFKAAVAGRDGARQINRK* # PASA_UPDATE: g5272.t1, single gene model update, valid-1, status:[pasa:asmbl_2067,status:12], valid-1 NODE_1593_length_10313_cov_42.7602 . gene 212 445 . + . ID=g5272;Name=g5272.t1 NODE_1593_length_10313_cov_42.7602 . mRNA 212 445 . + . ID=g5272.t1;Parent=g5272;Name=g5272.t1 NODE_1593_length_10313_cov_42.7602 . five_prime_UTR 212 212 . + . ID=g5272.t1.utr5p1;Parent=g5272.t1 NODE_1593_length_10313_cov_42.7602 . exon 212 445 . + . ID=g5272.t1.exon1;Parent=g5272.t1 NODE_1593_length_10313_cov_42.7602 . CDS 213 437 . + 0 ID=cds.g5272.t1;Parent=g5272.t1;5_prime_partial=true NODE_1593_length_10313_cov_42.7602 . three_prime_UTR 438 445 . + . ID=g5272.t1.utr3p1;Parent=g5272.t1 #PROT g5272.t1 g5272 YPVATMRPSRYATERRGSLCTRLPGTSPWSRACSLTGPRLCRRHSTRLCACGRLMRKWRNGHGMLGRKLLYIIV* # ORIGINAL: g5277.t1 original gene structure, not modified by PASA NODE_1593_length_10313_cov_42.7602 AUGUSTUS gene 8921 10196 . - . ID=g5277;Name=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS mRNA 8921 10196 . - . ID=g5277.t1;Parent=g5277;Name=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 10015 10196 . - . ID=g5277.t1.exon1;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 10015 10196 . - 0 ID=cds.g5277.t1;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 9555 9658 . - . ID=g5277.t1.exon2;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 9555 9658 . - 1 ID=cds.g5277.t1;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 9192 9347 . - . ID=g5277.t1.exon3;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 9192 9347 . - 2 ID=cds.g5277.t1;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 8921 8958 . - . ID=g5277.t1.exon4;Parent=g5277.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 8921 8958 . - 2 ID=cds.g5277.t1;Parent=g5277.t1 #PROT g5277.t1 g5277 MQSGSLKLKDTAETVVAKGYGVTSICYKPPSVGREGLSGAQPTELALLLVNSCDNVLRVFIVQNNGQLRILKQFPVFQETLDIRACFGSPIFGANEELLVFSGSEDGRVHTFDLCRRETPCVNKLTGHAKAVLAVAWSSGANLLASADAAGNVIIWGHE* # ORIGINAL: g5276.t1 original gene structure, not modified by PASA NODE_1593_length_10313_cov_42.7602 AUGUSTUS gene 7960 8798 . + . ID=g5276;Name=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS mRNA 7960 8798 . + . ID=g5276.t1;Parent=g5276;Name=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 7960 8068 . + . ID=g5276.t1.exon1;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 7960 8068 . + 0 ID=cds.g5276.t1;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 8189 8301 . + . ID=g5276.t1.exon2;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 8189 8301 . + 2 ID=cds.g5276.t1;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 8385 8443 . + . ID=g5276.t1.exon3;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 8385 8443 . + 0 ID=cds.g5276.t1;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS exon 8519 8798 . + . ID=g5276.t1.exon4;Parent=g5276.t1 NODE_1593_length_10313_cov_42.7602 AUGUSTUS CDS 8519 8798 . + 1 ID=cds.g5276.t1;Parent=g5276.t1 #PROT g5276.t1 g5276 MDIAEAVNHEVEYFRGRIMGLISGGYWVPWPDASSTDQLGLTTPVSDEGAYPIIDCDDPNQWSDSGGARQPSAHDADGIVPSLQSTTTDRTSTRSLGTITACVAVDYRGESGDKAVRSTQGLASASRHDSGADEDNQFRETVTDKFKTGDCSPDSVAIMRCMIQLQVLCAGMAELAHALRTPATTQ* # PASA_UPDATE: g11093.t1, single gene model update, valid-1, status:[pasa:asmbl_7648,status:12], valid-1 NODE_4814_length_1231_cov_34.5095 . gene 118 1030 . - . ID=g11093;Name=g11093.t1 NODE_4814_length_1231_cov_34.5095 . mRNA 118 1030 . - . ID=g11093.t1;Parent=g11093;Name=g11093.t1 NODE_4814_length_1231_cov_34.5095 . exon 1021 1030 . - . ID=g11093.t1.exon1;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . CDS 1021 1030 . - 0 ID=cds.g11093.t1;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . exon 799 918 . - . ID=g11093.t1.exon2;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . CDS 799 918 . - 2 ID=cds.g11093.t1;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . exon 373 607 . - . ID=g11093.t1.exon3;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . CDS 373 607 . - 2 ID=cds.g11093.t1;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . exon 118 235 . - . ID=g11093.t1.exon4;Parent=g11093.t1 NODE_4814_length_1231_cov_34.5095 . CDS 118 235 . - 1 ID=cds.g11093.t1;Parent=g11093.t1;3_prime_partial=true #PROT g11093.t1 g11093 MCLSETGLGKTTFIDTFFNITRDRAGVPFGSSPSTVDIVTRTHTIEDANARISLTIIDTPGYGDKVNNAEQAIQPILNYLDQQHNDYMNGQFAQLFGDGSKALPRDSRVHCCLLFIAPTGHGLKSHDLIMLRKLCPRVNVIPIIAKADTLTRAELDAFRVE # PASA_UPDATE: g7680.t1, single gene model update, valid-1, status:[pasa:asmbl_1370,status:3], valid-1 NODE_136_length_36087_cov_42.2338 . gene 5476 10564 . - . ID=g7680;Name=g7680.t1 NODE_136_length_36087_cov_42.2338 . mRNA 5476 10564 . - . ID=g7680.t1;Parent=g7680;Name=g7680.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 10537 10564 . - . ID=g7680.t1.utr5p1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 10373 10423 . - . ID=g7680.t1.utr5p2;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 10537 10564 . - . ID=g7680.t1.exon1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 10047 10423 . - . ID=g7680.t1.exon2;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 10047 10372 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 9772 9913 . - . ID=g7680.t1.exon3;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 9772 9913 . - 1 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 9418 9591 . - . ID=g7680.t1.exon4;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 9418 9591 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 9105 9281 . - . ID=g7680.t1.exon5;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 9105 9281 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 8740 8894 . - . ID=g7680.t1.exon6;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 8740 8894 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 8357 8611 . - . ID=g7680.t1.exon7;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 8357 8611 . - 1 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 8056 8233 . - . ID=g7680.t1.exon8;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 8056 8233 . - 1 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 7546 7635 . - . ID=g7680.t1.exon9;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 7546 7635 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 7305 7432 . - . ID=g7680.t1.exon10;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 7305 7432 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 6966 7180 . - . ID=g7680.t1.exon11;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 6966 7180 . - 1 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 6755 6792 . - . ID=g7680.t1.exon12;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 6755 6792 . - 2 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 6452 6572 . - . ID=g7680.t1.exon13;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 6452 6572 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 6241 6300 . - . ID=g7680.t1.exon14;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 6241 6300 . - 2 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 5953 6119 . - . ID=g7680.t1.exon15;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 5953 6119 . - 2 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 5773 5865 . - . ID=g7680.t1.exon16;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 5773 5865 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . exon 5476 5672 . - . ID=g7680.t1.exon17;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . CDS 5577 5672 . - 0 ID=cds.g7680.t1;Parent=g7680.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 5476 5576 . - . ID=g7680.t1.utr3p1;Parent=g7680.t1 #PROT g7680.t1 g7680 MVADVKLRELIRQIRATRTAADERAVVARECAHIRTAFKEEENDSRCRNVAKLLYIHMLGYPAHFGQLECLKLVASSRFIDKRIGYLGVSMLLDERADVHVLVTNSLKNDMGSQNQYIVGLALCTLGSIASSEMARDLASEVEKLLRSSNPYIRKKAQLCALRILKKDPELLETFANATRQLLGERNHAVLLTGVSLLIEMCKHNHEALDYFRKNVPNLVRILKNLVMSGFAPEHDVAGITDPFLQVKILRLMRILGHSDPESSDAMNDILAQVATNTETSKNVGNAILYETVQTIMHIKSESGLRVLAVNILGRFLVNQDKNIRYVALSTLLHTVTEDSNAVQRHRNTVVDCLKDADISIRKRALELLFALVNSSNIRALMRELLNFIEVADVEFKQYMTTNIFRVAERFSPNKRWHIDTVLKVLINAGNYVRDDVVSSLISLIQNTPELHAYTVQKLYLAVQEDIIQQPLVQVGLYCIGEYGDLLLAGAVEEEEPITVSEGEVISLIESVLSSPHSSLPTREYAINALAKLSTRFNGGNDRIRQVLGRYGVDVDVELQQRAVEYSSLFGNDTIRRALLERMPPIEKAQSQYSGEDEDVAATSPVPDAAPVQASAPVQSHAAPSSNNILDLLGGSAPAPASSYQPAQRAGDLLDILGAPVAATAPAAAPAGQSLLDMFLPSSGGAVASGPSGTIAFEKGGVRVVFAYDYQPGNPILTINITATSSLPVPVSNFVFQAAVPKTMKLQMLPPSGADLFIGSSVTQIIKIANPEKHAIRMRYKVAYVANGSQITEQGEVSEFPSMS* # PASA_UPDATE: g7686.t1, single gene model update, valid-1, status:[pasa:asmbl_1373,status:12],[pasa:asmbl_1374,status:12], valid-1 NODE_136_length_36087_cov_42.2338 . gene 26030 28188 . - . ID=g7686;Name=g7686.t1 NODE_136_length_36087_cov_42.2338 . mRNA 26030 28188 . - . ID=g7686.t1;Parent=g7686;Name=g7686.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 28073 28188 . - . ID=g7686.t1.utr5p1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 27940 28188 . - . ID=g7686.t1.exon1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 27940 28072 . - 0 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 27721 27849 . - . ID=g7686.t1.exon2;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 27721 27849 . - 2 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 27226 27610 . - . ID=g7686.t1.exon3;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 27226 27610 . - 2 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 26887 27019 . - . ID=g7686.t1.exon4;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 26887 27019 . - 1 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 26529 26669 . - . ID=g7686.t1.exon5;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 26529 26669 . - 0 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . exon 26030 26377 . - . ID=g7686.t1.exon6;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . CDS 26090 26377 . - 0 ID=cds.g7686.t1;Parent=g7686.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 26030 26089 . - . ID=g7686.t1.utr3p1;Parent=g7686.t1 #PROT g7686.t1 g7686 MSSGGHGGMDPPEEQSQSQSRASKRRRVGKACLHCQRSHLMCDSLRPCSRCVKRNISHLCRDDAAPDASSATPEAEVPFIQWEAGAGAAGAAALLEAAAACARASGVVPSAGDEENATWLGELSKFPEFMDLGLFGLANGMAAAGGAAAGGPSGGGFPAGVLLSRGDVALPGDAASYAAQIEPGTIGNMARRRGVGPRIFDYVASFMDIRAYFAACLTVDQLMHLRDILMPVRKQILETLFNLEYKDLVFIEEMFERKVLFYKKYFDDIGVPSCLWRRTGHVELINDTFAELLGQTADELVGNNIYKMLDPLSLHDFVMRLSIPLLYGMANRTIISTMRFRRKNGAPFTVKAALTVKRDVYELPLCIVGSFMEITEADAQSTLDVLRQGKESSSPAADGAAV* # PASA_UPDATE: g7685.t1, single gene model update, valid-1, status:[pasa:asmbl_1367,status:3], valid-1 NODE_136_length_36087_cov_42.2338 . gene 24382 26014 . + . ID=g7685;Name=g7685.t1 NODE_136_length_36087_cov_42.2338 . mRNA 24382 26014 . + . ID=g7685.t1;Parent=g7685;Name=g7685.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 24382 24442 . + . ID=g7685.t1.utr5p1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 24382 24516 . + . ID=g7685.t1.exon1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 24443 24516 . + 0 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 24623 24730 . + . ID=g7685.t1.exon2;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 24623 24730 . + 1 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 24895 24976 . + . ID=g7685.t1.exon3;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 24895 24976 . + 1 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 25137 25266 . + . ID=g7685.t1.exon4;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 25137 25266 . + 0 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 25446 25552 . + . ID=g7685.t1.exon5;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 25446 25552 . + 2 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . exon 25745 26014 . + . ID=g7685.t1.exon6;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . CDS 25745 25930 . + 0 ID=cds.g7685.t1;Parent=g7685.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 25931 26014 . + . ID=g7685.t1.utr3p1;Parent=g7685.t1 #PROT g7685.t1 g7685 MAAVANDYRAGPVQHHWSPYASNGGTILGIAGPDFAVLASDTRLSEGFEIMSRDTPKAFKLSNKTVLGCCGFHGDVITLTKVLAMRLQNYEHAHDKTMSTTAIAQMLSNTLYYKRFFPYYTYNILAGVDEEGRGAVYSYDPVGSHERETYRAGGSAAALLQPLLDNQLGYKNQVNVAKEPLSVDRAVRLARDVFVAAAERDIYTGDGVEIQVVTKDGVQVHRFPLRRD* # PASA_UPDATE: g7684.t1, single gene model update, valid-1, status:[pasa:asmbl_1372,status:12], valid-1 NODE_136_length_36087_cov_42.2338 . gene 22508 24091 . - . ID=g7684;Name=g7684.t1 NODE_136_length_36087_cov_42.2338 . mRNA 22508 24091 . - . ID=g7684.t1;Parent=g7684;Name=g7684.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 24049 24091 . - . ID=g7684.t1.utr5p1;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . exon 24022 24091 . - . ID=g7684.t1.exon1;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . CDS 24022 24048 . - 0 ID=cds.g7684.t1;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . exon 23439 23613 . - . ID=g7684.t1.exon2;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . CDS 23439 23613 . - 0 ID=cds.g7684.t1;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . exon 22508 23145 . - . ID=g7684.t1.exon3;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . CDS 23063 23145 . - 2 ID=cds.g7684.t1;Parent=g7684.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 22508 23062 . - . ID=g7684.t1.utr3p1;Parent=g7684.t1 #PROT g7684.t1 g7684 MSGPSALIRFSRWAALGLGLLYGSSHYRAVAAEERAHLAHVEHKRREKEEIDELRRIAAAARAAAGGVITNPEDPAFSLERLIESYSAPAAAAH* # ORIGINAL: g7683.t1 original gene structure, not modified by PASA NODE_136_length_36087_cov_42.2338 AUGUSTUS gene 18629 22422 . + . ID=g7683;Name=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS mRNA 18629 22422 . + . ID=g7683.t1;Parent=g7683;Name=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 18629 18844 . + . ID=g7683.t1.exon1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 18629 18844 . + 0 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 19045 19977 . + . ID=g7683.t1.exon2;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 19045 19977 . + 0 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 20153 20334 . + . ID=g7683.t1.exon3;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 20153 20334 . + 0 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 20460 21202 . + . ID=g7683.t1.exon4;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 20460 21202 . + 1 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 21414 21526 . + . ID=g7683.t1.exon5;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 21414 21526 . + 2 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 21656 21768 . + . ID=g7683.t1.exon6;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 21656 21768 . + 0 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 21946 22047 . + . ID=g7683.t1.exon7;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 21946 22047 . + 1 ID=cds.g7683.t1;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 22278 22422 . + . ID=g7683.t1.exon8;Parent=g7683.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 22278 22422 . + 1 ID=cds.g7683.t1;Parent=g7683.t1 #PROT g7683.t1 g7683 MDPEYVSAGCNRVPGCAAWCALPSLVAYGACQSVVIFDPAEDCEDGASRVVRTLHGHGGRVNCVRWAETDNRVELLSGAADGSVLCWSSARASPEALSQSAALKGHTASVTAIDVVFHFGRHIAVTCAADETVRVWERILGCDEWVCVQTIGRELGLSGFQHCAALSCLPHGDGDGAGKYTLTDGVSSATERPSSAAPLLLVLGGTDCTAHVLVRAVASLPFSRALVLRGHENWIRGVSVAHTAPSDGTGRRGRGDALIATAAQDHYVRLWRVEVLTGDAGRAALSRDAAVGADDLSSRTHVAAVGGAADGAVLRVSLESVISGHDDWVYSVCWHPPVPAQPADGAHGAQSAFVQPLALLSASMDKSVMIWRPDPRSGVWINRARMGELGGRTLGLYGATFGPGGRHVIAHGYQGAFHFWSDSASVLSADSSDVRRTSGARDRAELWHEMARPQIHGFDLKCARFLGKKTPRMASGAEEKVMRVFDAPSLFVAAMGALGVPCDADQPHRALGASVPALGLSNKAVFSGQGTGDVGSVSGSGNDGGGENDEDDPFARENPPAFQADAVLSPGDVPLEGHLMQNTLWPETAKLYAHGNELACMAANSDGTLVYSGCAANRPDLATLRGWRVDGAGSAHKDNAADGAAVWVDADPLPAHQLTVTCIAFSHDDGWIAAVSRDRMWTLFRRDPTEGGAPRYLFHSKRECHERIVWAVSWSHDDKFFATASRDKTIKVWAATQTGEWALAHTFPKQSDSVTAVDWAPALANGRYLLAAGFENGAVRVFACPVEDVTKWQNHASTDEFTSHGLTVNRVVWQPASANEVPGAGIRRLASCGDDHCVRVYAVSVGAE* # PASA_UPDATE: g7679.t1, single gene model update, valid-1, status:[pasa:asmbl_1369,status:12], valid-1 NODE_136_length_36087_cov_42.2338 . gene 1880 5171 . - . ID=g7679;Name=g7679.t1 NODE_136_length_36087_cov_42.2338 . mRNA 1880 5171 . - . ID=g7679.t1;Parent=g7679;Name=g7679.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 5086 5171 . - . ID=g7679.t1.utr5p1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 4978 4987 . - . ID=g7679.t1.utr5p2;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 5086 5171 . - . ID=g7679.t1.exon1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 4807 4987 . - . ID=g7679.t1.exon2;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 4807 4977 . - 0 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 3907 4716 . - . ID=g7679.t1.exon3;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 3907 4716 . - 0 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 3292 3827 . - . ID=g7679.t1.exon4;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 3292 3827 . - 0 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 3134 3192 . - . ID=g7679.t1.exon5;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 3134 3192 . - 1 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 2935 2985 . - . ID=g7679.t1.exon6;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 2935 2985 . - 2 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 2727 2844 . - . ID=g7679.t1.exon7;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 2727 2844 . - 2 ID=cds.g7679.t1;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . exon 1880 2603 . - . ID=g7679.t1.exon8;Parent=g7679.t1 NODE_136_length_36087_cov_42.2338 . CDS 1880 2603 . - 1 ID=cds.g7679.t1;Parent=g7679.t1 #PROT g7679.t1 g7679 MDGGVATAPVMELTRLERRIREAEDARRAKEDQLRIVREEQRRQRELRRLQEEEEEKLYAQRREARLRKLSQMRIDGVDDPNVQLTAAALGSAPSPGAAADSADIVTTAVITSLSETDNTVSASTAPSTLHSTPFSDPEIPMGGSRYASASEVVASASTMEGLPEELREAETAVEMLAAVIASVDKHNNEGNTEKMHDLWGGACTQPSGAAPFGIPSTDARVEPSISHQVGTMPEEFPESVHPDNGSVVAHATAKAETIPHSISFPIAITSTSKGGDGDARATEDFNAQPHSLRKSHRPHHAARLARKPANSDGEDAEETFEAVEEQVKRAKGLYDGLRYEEAMRDGTRNLVRALRQSRSPILESAEKELAEREARTFQTRSELRRACSTLPPALLEIAGISTSAVFATGDLRGQHATTNSPFSLAVAHSTAAFPQGTPPSYATLRRTPLAKMSPLTPNGSLIGGGSGARTGRRSMSPNHANIMAELSNLTLGENGEVVLDPRSNRPGASVKSPYLPSTAEILLSGVKLQLCKDRPRDSKGPERYLHSYFFVARCGTQVFTSNITEIHGADKEIIFDEQVSFAGVPHSFEAMVDVYYKRRKDPSVARPSAKRLLMGIVHPRDTPAADPPFVIAASATITLGTVKRNMAGGSLASDNADFASRMTLPLVVREPLSMLSAASATANVTMHIQWYAGSRPTPTAKDGDATSAGFLTLRRQPDETTWKRRYCVLGNGVLSYWQYPEDAASGKPSLGAIDLALCAEGTRVARAPQTESVRAHTLKVSMADDAGWLLVADTADDKRVWKEALNKTVADLRAWGTEWRV* # ORIGINAL: g7688.t1 original gene structure, not modified by PASA NODE_136_length_36087_cov_42.2338 AUGUSTUS gene 35187 35941 . - . ID=g7688;Name=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS mRNA 35187 35941 . - . ID=g7688.t1;Parent=g7688;Name=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 35888 35941 . - . ID=g7688.t1.exon1;Parent=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 35888 35941 . - 0 ID=cds.g7688.t1;Parent=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 35577 35750 . - . ID=g7688.t1.exon2;Parent=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 35577 35750 . - 0 ID=cds.g7688.t1;Parent=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS exon 35187 35423 . - . ID=g7688.t1.exon3;Parent=g7688.t1 NODE_136_length_36087_cov_42.2338 AUGUSTUS CDS 35187 35423 . - 0 ID=cds.g7688.t1;Parent=g7688.t1 #PROT g7688.t1 g7688 MWIDDVCLNQPTGSILWMAPEVISMATDPHTPASDVYSYGIVLYELLTGKLPYRGMHPDQILFMVGKGFLRPDIKAVRADSPPALLTLMTRCWDKVRDQRPMFRSVLAQLRAIHKHLSTLRRSASTPTLSKRTVNRIRREFGMPRFENAMQSKV* # PASA_UPDATE: g7682.t1, single gene model update, valid-1, status:[pasa:asmbl_1365,status:12],[pasa:asmbl_1366,status:12], valid-1 NODE_136_length_36087_cov_42.2338 . gene 12767 18334 . + . ID=g7682;Name=g7682.t1 NODE_136_length_36087_cov_42.2338 . mRNA 12767 18334 . + . ID=g7682.t1;Parent=g7682;Name=g7682.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 12767 12803 . + . ID=g7682.t1.utr5p1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 12767 12967 . + . ID=g7682.t1.exon1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 12804 12967 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 13052 13131 . + . ID=g7682.t1.exon2;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 13052 13131 . + 1 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 13221 13428 . + . ID=g7682.t1.exon3;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 13221 13428 . + 2 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 13509 14142 . + . ID=g7682.t1.exon4;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 13509 14142 . + 1 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 14288 14896 . + . ID=g7682.t1.exon5;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 14288 14896 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 14991 15347 . + . ID=g7682.t1.exon6;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 14991 15347 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 15484 15584 . + . ID=g7682.t1.exon7;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 15484 15584 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 15747 15876 . + . ID=g7682.t1.exon8;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 15747 15876 . + 1 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 16000 16205 . + . ID=g7682.t1.exon9;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 16000 16205 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 16334 16494 . + . ID=g7682.t1.exon10;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 16334 16494 . + 1 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 16608 16696 . + . ID=g7682.t1.exon11;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 16608 16696 . + 2 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 16811 17221 . + . ID=g7682.t1.exon12;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 16811 17221 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 17334 17462 . + . ID=g7682.t1.exon13;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 17334 17462 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 17570 17722 . + . ID=g7682.t1.exon14;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 17570 17722 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 17818 17932 . + . ID=g7682.t1.exon15;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 17818 17932 . + 0 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . exon 18027 18334 . + . ID=g7682.t1.exon16;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . CDS 18027 18241 . + 2 ID=cds.g7682.t1;Parent=g7682.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 18242 18334 . + . ID=g7682.t1.utr3p1;Parent=g7682.t1 #PROT g7682.t1 g7682 MASIFTTAAGAACIIVAIACIAAPSHAHSYVSVPVTRSNQASTWRGELVGPCDKAYDANAPRVTVKRGDVITIQWPRNNHPGGVIRVAWSPATSSNDPASFDAGVTKYSCHEFPCTAQTQCDNVISPGCTPCQVTASVPAFAADGVWTVQWVWYGGGFGLSPYYSCIDYTVSGGPTVVNTRPQPVFVGGDATFAQTCWLCATCDTKFRSGPTLSELASGYRPGPPQSASAAPAPATSKPNGPASASAAPPPAASSVAPPPPKPDDPKPPLPSDDICKAAVNGIACFPGDCCNQYVNCLDGKAHPPQPVAPGTLCKQGVLVHTYDCPNTCQAPSYSLPTAAIVGKPATGAIIYDVNNAAATLTVLATGNATQIKWAFLSADGRTPLTIGPAVDGTSLSVARTTAGEGTIRVTVTDSRGATASDSVVVRVVAAAPDKPPVANAGARQDIVLPINSVTLDASGSSDDKGAVTYSWSRVSGPNTPSIVSPSIASTSVTSLVAGTYVFRVVVKDSANQVDQADVTVTVDLNECIDGNNGGCSIRATCINSFGSRLCTCMVGYKGDGINCQPDSTSGGSTTPDNGQPSSKPCTGKDQETLCWPRNCAPQYYTCTRGVASESVQTQAGYVCYGGNLVKKNDSAECKDALPDGTMTNHTEDKPKPVCGDGFCFALSETCSSCPADCGVCPPRCGDGVCSGAETCSTCQADCGSCTQSATKPYFNIGYYTNWAQYRSGGGGMYKFFPENIDATLFTHLAYGFAKVTSDLQIVPFEWNDIIDWNPAQGMYRRFHAHVRSKNPSIRTLISLGGWNFNADSATKSIFTTMAASDATRRTFARNCISFARTNDFDGVDIDWEYPGDVSQGGNAVDKVNYVEMLKAFRDEINKETLAAGKQRLLLSIAVGAGESTINNGYNVAEIHKSVDWVGLMSYDLHGSWDPQTGSQTALFDPKSTLNIDFAVTKWLSGGMPPAKLVVGLASYGRSWELSSPTVAGMGAPTRGAGRAGPYTAAAGFLSYYEILDMIKAGAVVTYDDTSKSMYASLSGQWVSYDNEKTLGQKVDYIISRKLGGSMFWAMDLDDFRNAYPLIGAVAQRLYVKTTAPLAAVVRLDNSVSTNPQSLNFAIAAALATQANVPASSLRVLSTDTQADGSQKVEYVIVESYEKPSAQIGQQMAATCGSTGSDGVVVTQNDVCSVYGSKSSGLPGWGIALIVVGCVAVAAGVIVGAVVLSRKSQGSRMRADSFGGNKRRVEGSQAELNILHP* # PASA_UPDATE: g7678.t1, single gene model update, valid-1, status:[pasa:asmbl_1364,status:3], valid-1 NODE_136_length_36087_cov_42.2338 . gene 191 2691 . + . ID=g7678;Name=g7678.t1 NODE_136_length_36087_cov_42.2338 . mRNA 191 2691 . + . ID=g7678.t1;Parent=g7678;Name=g7678.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 191 235 . + . ID=g7678.t1.utr5p1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 191 395 . + . ID=g7678.t1.exon1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 236 395 . + 0 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 483 581 . + . ID=g7678.t1.exon2;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 483 581 . + 2 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 677 724 . + . ID=g7678.t1.exon3;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 677 724 . + 2 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 804 945 . + . ID=g7678.t1.exon4;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 804 945 . + 2 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 1051 1105 . + . ID=g7678.t1.exon5;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 1051 1105 . + 1 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 1216 1317 . + . ID=g7678.t1.exon6;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 1216 1317 . + 0 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 1409 1474 . + . ID=g7678.t1.exon7;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 1409 1474 . + 0 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . exon 1586 2691 . + . ID=g7678.t1.exon8;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . CDS 1586 1768 . + 0 ID=cds.g7678.t1;Parent=g7678.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 1769 2691 . + . ID=g7678.t1.utr3p1;Parent=g7678.t1 #PROT g7678.t1 g7678 MASVEQLNSARCYGGYVRQYKHQSEALNCPMTFVAYIPPQAESEKVPVLYWLSGLTCNDQNFITKAGAQRAAAKWGIIIVCPDTSPRGCKIEGVDANWDFGHGAGFYVDATEDKWKENFRMYTYITEELPAIVNATLPVRADRQSISGHSMGGHGALICAIKNPGKYKSVSAFAPICNPINCPWGVKAFSGYLGTDNKDAWKAYDATELAAAYKGPHLDILIDQGTEDNFYKQGQLLPQAFVRACVDSTIPVALRMQEGYDHSYYFIATFIDSHIEHHAKYLLD* # PASA_UPDATE: g7687.t1, single gene model update, valid-1, status:[pasa:asmbl_1368,status:3], valid-1 NODE_136_length_36087_cov_42.2338 . gene 28509 35085 . + . ID=g7687;Name=g7687.t1 NODE_136_length_36087_cov_42.2338 . mRNA 28509 35085 . + . ID=g7687.t1;Parent=g7687;Name=g7687.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 28509 28632 . + . ID=g7687.t1.utr5p1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 28509 28753 . + . ID=g7687.t1.exon1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 28633 28753 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 28889 29085 . + . ID=g7687.t1.exon2;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 28889 29085 . + 2 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 29219 29379 . + . ID=g7687.t1.exon3;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 29219 29379 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 29481 29733 . + . ID=g7687.t1.exon4;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 29481 29733 . + 1 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 29925 30044 . + . ID=g7687.t1.exon5;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 29925 30044 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 30226 30423 . + . ID=g7687.t1.exon6;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 30226 30423 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 30650 30862 . + . ID=g7687.t1.exon7;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 30650 30862 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 31141 31266 . + . ID=g7687.t1.exon8;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 31141 31266 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 31415 31513 . + . ID=g7687.t1.exon9;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 31415 31513 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 31674 31820 . + . ID=g7687.t1.exon10;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 31674 31820 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 32016 32072 . + . ID=g7687.t1.exon11;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 32016 32072 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 32263 32370 . + . ID=g7687.t1.exon12;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 32263 32370 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 32625 32795 . + . ID=g7687.t1.exon13;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 32625 32795 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 32961 33134 . + . ID=g7687.t1.exon14;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 32961 33134 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 33439 33615 . + . ID=g7687.t1.exon15;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 33439 33615 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 33755 33887 . + . ID=g7687.t1.exon16;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 33755 33887 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 34045 34304 . + . ID=g7687.t1.exon17;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 34045 34304 . + 2 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . exon 34515 35085 . + . ID=g7687.t1.exon18;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . CDS 34515 34871 . + 0 ID=cds.g7687.t1;Parent=g7687.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 34872 35085 . + . ID=g7687.t1.utr3p1;Parent=g7687.t1 #PROT g7687.t1 g7687 MNNKAGEGLTDFVMLNDVTEESFMKNLKERFEAGHIYTYIGEQVVSVNPFRKVDIYTPKIMESYKRMYMYEVPPHIYALADDTYRALMQTKDNQCVIITGESGAGKTEASKIFMQYIAKVSANRGEGDNVKGKLLDSNPVLEAFGNSKTLRNDNSSRFGKYMEINFDGAGAPVGGKVSQYLLEKSRVVTRAEGERSFHVFYQLLSQKDKLSSLGLQADPSKYAYLASSKCNTVDSINDSEDFKEVTKAMKSLGWSDLETQSVWRVLAAVLLVGNVDFVKDASKQNVDAVNVSTKDIVKSIADLLECDSRALENALVTRSISTGAGKSHEGNINVFLDKTQAIFTRDSLAKSLYDQLFTWVVGKINEKIVVSGRAELVIGVLDIYGFEIFEHNSFEQFCINFCNEKLQQLFIKLVLKQEQEEYVRENIEWEEIKYFNNAPICELFENTPIGIYSLLDEACMVGQSTPESFLEKLNGAFSKHAHFETFTKDKTLGKDKFRIKHYAGVVTYEAEHFLFKNRDSLFHDLIVAMQSSKNALVTAMFPQQKQRDMKRPLTAGTQFKQAVQELVTTLNACQPHYIRCIKSNDVKRGQYLDEERVKHQVRYLNLVETVRVRRAGFCNRQPYERCLPRYKMLSKKTWPVWRGSNMDGIKAILDELKVDPKEYRLGKTKLFIRNAKTLFLFEERRAIELPKVVIAIQRRWKGHKTRKWFKQALEQMRAERAELEAKLRRVRAVNKIQVAYVNSRARKYIAALNRTFSGVQNARPHFGKGTPFPTLRRGKSSPIEAYVAKIHLVWWGRAKVLSLSEEERALMRQKIVALDLFRGNKPWACARRFKGDYLGMESNNARRQQFHDAVQHLFQKYGDSEIQYADDVVKVNPKGKPQLRTIIMTEQNIYKYDPKKYKIKKVGIPLQSVQGVALSRQRDGYIVIHMAAPERDIVIDCGVSGEERVSELATVIFTTMQRNYNRQIPVRFEDRVVYNNSRDAKGSAGSDVSLTFAPNPKPQGNESAFKLLKKDQAVVHFTA* # PASA_UPDATE: g7681.t1, single gene model update, valid-1, status:[pasa:asmbl_1371,status:12], valid-1 NODE_136_length_36087_cov_42.2338 . gene 10846 12304 . - . ID=g7681;Name=g7681.t1 NODE_136_length_36087_cov_42.2338 . mRNA 10846 12304 . - . ID=g7681.t1;Parent=g7681;Name=g7681.t1 NODE_136_length_36087_cov_42.2338 . five_prime_UTR 12263 12304 . - . ID=g7681.t1.utr5p1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . exon 12089 12304 . - . ID=g7681.t1.exon1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . CDS 12089 12262 . - 0 ID=cds.g7681.t1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . exon 11881 11991 . - . ID=g7681.t1.exon2;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . CDS 11881 11991 . - 0 ID=cds.g7681.t1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . exon 11643 11726 . - . ID=g7681.t1.exon3;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . CDS 11643 11726 . - 0 ID=cds.g7681.t1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . exon 11283 11532 . - . ID=g7681.t1.exon4;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . CDS 11283 11532 . - 0 ID=cds.g7681.t1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . exon 10846 11113 . - . ID=g7681.t1.exon5;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . CDS 11046 11113 . - 2 ID=cds.g7681.t1;Parent=g7681.t1 NODE_136_length_36087_cov_42.2338 . three_prime_UTR 10846 11045 . - . ID=g7681.t1.utr3p1;Parent=g7681.t1 #PROT g7681.t1 g7681 MEGMDEDGVMVETDELEAAAEVLRAQRQLHAQGLAAMEADGGPVDKPQFAPLTAQEVLGGRTEERKVPVPPHRYTPLKADWVKIYTPIVQHMKLQTSPHTEESGALQKAFDFVKAYMMGFDVEDAMALLRLDDLYVDSFEITDVKPLHGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKIARDALVSLILGSPPGKVYGQLRSVASRMTERF* # PASA_UPDATE: g8865.t1, single gene model update, valid-1, status:[pasa:asmbl_3053,status:12], valid-1 NODE_1935_length_8461_cov_21.746 . gene 1214 4221 . - . ID=g8865;Name=g8865.t1 NODE_1935_length_8461_cov_21.746 . mRNA 1214 4221 . - . ID=g8865.t1;Parent=g8865;Name=g8865.t1 NODE_1935_length_8461_cov_21.746 . five_prime_UTR 4157 4221 . - . ID=g8865.t1.utr5p1;Parent=g8865.t1 NODE_1935_length_8461_cov_21.746 . five_prime_UTR 4033 4046 . - . ID=g8865.t1.utr5p2;Parent=g8865.t1 NODE_1935_length_8461_cov_21.746 . exon 4157 4221 . - . ID=g8865.t1.exon1;Parent=g8865.t1 NODE_1935_length_8461_cov_21.746 . exon 1214 4046 . - . ID=g8865.t1.exon2;Parent=g8865.t1 NODE_1935_length_8461_cov_21.746 . CDS 1393 4032 . - 0 ID=cds.g8865.t1;Parent=g8865.t1 NODE_1935_length_8461_cov_21.746 . three_prime_UTR 1214 1392 . - . ID=g8865.t1.utr3p1;Parent=g8865.t1 #PROT g8865.t1 g8865 MGCTRFRIGVALTVCGVIGIIAGLVIGLVLPPFVQNTINDGVTCPQSTGNACYDRWQTNNRTGSGKNEPSFVYNDVYMYNITNPEAVKTGAAPDLVEAPKYTYRVNYRYFDVLWDYANDIITYKEFRWLTPADASESDTTGGPIVTMISPTALSLLYSGLTGVLNKFALPYAKSNNVNTKCLNFASSTSLDAVLNPVTVIDSDLAYESALACRKELSLMYPDMLANPGTYYASLPLLLDRYGGDFAVAATKMLPLLLGKMMVPLFSAFTNKTAYGMTAANQAVPADLSAYAQSLPGMAGGSSPSWLDINAYNKSAIPPLVAYQFATGRLSLMASGGLVTTGVLGIPDVRNNIRLSRLFPTSDLYAAIPDSFPTFEFGVIYKNEVAAYLANEPTTTATNLVLSVYNLIAGGGSVAFLPTAFAYYQLNAASADTVASEFKKYSGGDLNATNPAFKDLVTGIHHFIYNDATPLLQDFLFAPGREWGFLATRPLSNWARGLKSPIYELLKSRTGHCQPGFLTHHTGQTATDSSAGKLSGGCIIPAYYSPPLSDSLPNLQPNSLEYSYYTGKSDISKIWQYAGIGKSSRRDWQYVNNWYYPMPAYLKGAEGKAAMRVEGFGGTQFMPAADTYILHGVTKPRQNEYEVFVTQADRHLTLKYEGNMKVAGITLNRFVAEQDILKADNKLNRLFFENVTLDNGLETVDGIQTTIDSRGFPSWISRPYFVYGDPRLLSVFPTLKNNKKDDMAYDTFLGIEPITGATMLAQKQLQGNVGVLYGMLSKYNLYNVAFNRTYMSRPIPFYWVNERAEISSAKADAFKHSVYVTSDLAYAALIAGPLVGGLMTIAGVFLIVSSRNQRLGGTESEAAFVKNGGSFEVANPIYGH* # PASA_UPDATE: g8864.t1, single gene model update, valid-1, status:[pasa:asmbl_3052,status:12], valid-1 NODE_1935_length_8461_cov_21.746 . gene 168 870 . - . ID=g8864;Name=g8864.t1 NODE_1935_length_8461_cov_21.746 . mRNA 168 870 . - . ID=g8864.t1;Parent=g8864;Name=g8864.t1 NODE_1935_length_8461_cov_21.746 . five_prime_UTR 827 870 . - . ID=g8864.t1.utr5p1;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . five_prime_UTR 626 629 . - . ID=g8864.t1.utr5p2;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . exon 827 870 . - . ID=g8864.t1.exon1;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . exon 548 629 . - . ID=g8864.t1.exon2;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . CDS 548 625 . - 0 ID=cds.g8864.t1;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . exon 168 341 . - . ID=g8864.t1.exon3;Parent=g8864.t1 NODE_1935_length_8461_cov_21.746 . CDS 168 341 . - 0 ID=cds.g8864.t1;Parent=g8864.t1 #PROT g8864.t1 g8864 MNAEKLAKLQADVRIGGKGTPRRKKKVVHKTSGADDKKLQSTLKKFGLNVIPGIEEVTMFRDDGKIVQITSPKGASLVPSTAF* # PASA_UPDATE: g8200.t1, single gene model update, valid-1, status:[pasa:asmbl_6621,status:12], valid-1 NODE_3831_length_2662_cov_39.3456 . gene 73 2650 . + . ID=g8200;Name=g8200.t1 NODE_3831_length_2662_cov_39.3456 . mRNA 73 2650 . + . ID=g8200.t1;Parent=g8200;Name=g8200.t1 NODE_3831_length_2662_cov_39.3456 . exon 73 228 . + . ID=g8200.t1.exon1;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 73 228 . + 0 ID=cds.g8200.t1;Parent=g8200.t1;5_prime_partial=true NODE_3831_length_2662_cov_39.3456 . exon 449 628 . + . ID=g8200.t1.exon2;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 449 628 . + 0 ID=cds.g8200.t1;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . exon 996 1154 . + . ID=g8200.t1.exon3;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 996 1154 . + 0 ID=cds.g8200.t1;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . exon 1420 1620 . + . ID=g8200.t1.exon4;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 1420 1620 . + 0 ID=cds.g8200.t1;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . exon 1983 2132 . + . ID=g8200.t1.exon5;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 1983 2132 . + 0 ID=cds.g8200.t1;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . exon 2363 2650 . + . ID=g8200.t1.exon6;Parent=g8200.t1 NODE_3831_length_2662_cov_39.3456 . CDS 2363 2650 . + 0 ID=cds.g8200.t1;Parent=g8200.t1 #PROT g8200.t1 g8200 ITLRRMVYLSIKELSTIAEDVIIVTSSLTKDMTAKEDLYRANAIRALCKITDNTMLQGIERYLKQAIVDKNPTVSSAALVSSVALLKDNFDVVKRWVNEIQEALQSKSNMVQYHALGLLYHLKQKDKLAVSKMLASLMKGSLRSPHAFCLLIRYASQSLDDGDEQSMKLLFDFLEQCLRHKSEMVVYEAARAICNLSSATARELTPAISVLQMFLSSPKPTLRFAAVRSLNKVALTRPLSVTSCNLDMENLITDANRSIATLAITTLLKTGSEGSIERLMKQISSFMSEISDEFKIVVVDAIRSLCLKFPSKQAVMMGFLSGVLRDEGGYEYKKAIVDTISGIIAEIPEAKETGACLRACLRACLRACVRACFALAW* # ORIGINAL: g5965.t1 original gene structure, not modified by PASA NODE_1708_length_9582_cov_38.0219 AUGUSTUS gene 245 3725 . - . ID=g5965;Name=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS mRNA 245 3725 . - . ID=g5965.t1;Parent=g5965;Name=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 3551 3725 . - . ID=g5965.t1.exon1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 3551 3725 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 3222 3403 . - . ID=g5965.t1.exon2;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 3222 3403 . - 2 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 2690 2818 . - . ID=g5965.t1.exon3;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 2690 2818 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 2390 2473 . - . ID=g5965.t1.exon4;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 2390 2473 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 1905 1953 . - . ID=g5965.t1.exon5;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 1905 1953 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 1313 1549 . - . ID=g5965.t1.exon6;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 1313 1549 . - 2 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 1036 1187 . - . ID=g5965.t1.exon7;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 1036 1187 . - 2 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 577 876 . - . ID=g5965.t1.exon8;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 577 876 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS exon 245 346 . - . ID=g5965.t1.exon9;Parent=g5965.t1 NODE_1708_length_9582_cov_38.0219 AUGUSTUS CDS 245 346 . - 0 ID=cds.g5965.t1;Parent=g5965.t1 #PROT g5965.t1 g5965 MEHQLLELVNGELREPTVLLDAWLCECNDPSVKIMPQKASSPASIEEAIALADVVHSTGMWLNYDLKQRFEILQNVAKSLEKYEEQMADADARTTGISINLTRAISGSIKGIFQELANGLKDIGLLTSVRGVHGRIEIERIPWGPTVVIAPWNVPVGTIAPKVAAALAAGAPVILKPSEWAPLSCVYFAKAIHESGLPPGIFQMVVGAGEVGARLVADSRIGSVNFTGSAATGRKVAHACIEHLKPVSLELGGSNPMVVFDDVHIEQAATCALQALTLLNGQWCAGLGRLIVHDKIKHKFVMTLLEKLAAVKMGSSMDTDAEMGPLAFSAHADMIRSKISELEKKGGHVLTATKIPLADDGSARNYVAPTVVEGLSMQDSVSVGEIFGPVATLHTFSTEREAVALANMAPAILMANVMCNDKERAFRVGRMIRSGLVMVNGVGFGFETTNAEPYFSMWGGAGLGDDGCLE # PASA_UPDATE: g5966.t1, single gene model update, valid-1, status:[pasa:asmbl_2407,status:12], valid-1 NODE_1708_length_9582_cov_38.0219 . gene 4362 9446 . + . ID=g5966;Name=g5966.t1 NODE_1708_length_9582_cov_38.0219 . mRNA 4362 9446 . + . ID=g5966.t1;Parent=g5966;Name=g5966.t1 NODE_1708_length_9582_cov_38.0219 . five_prime_UTR 4362 4578 . + . ID=g5966.t1.utr5p1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 4362 4617 . + . ID=g5966.t1.exon1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 4579 4617 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 4937 4969 . + . ID=g5966.t1.exon2;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 4937 4969 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 5261 5344 . + . ID=g5966.t1.exon3;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 5261 5344 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 5699 5854 . + . ID=g5966.t1.exon4;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 5699 5854 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 6114 6249 . + . ID=g5966.t1.exon5;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 6114 6249 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 6413 6522 . + . ID=g5966.t1.exon6;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 6413 6522 . + 2 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 6798 6935 . + . ID=g5966.t1.exon7;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 6798 6935 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 7150 7279 . + . ID=g5966.t1.exon8;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 7150 7279 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 7701 7769 . + . ID=g5966.t1.exon9;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 7701 7769 . + 2 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 7904 8016 . + . ID=g5966.t1.exon10;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 7904 8016 . + 2 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 8377 8490 . + . ID=g5966.t1.exon11;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 8377 8490 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 9020 9118 . + . ID=g5966.t1.exon12;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 9020 9118 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 9226 9356 . + . ID=g5966.t1.exon13;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 9226 9356 . + 0 ID=cds.g5966.t1;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . exon 9440 9446 . + . ID=g5966.t1.exon14;Parent=g5966.t1 NODE_1708_length_9582_cov_38.0219 . CDS 9440 9446 . + 1 ID=cds.g5966.t1;Parent=g5966.t1 #PROT g5966.t1 g5966 MAAMELSTPSVLKSQFSEGGPSTKMTGELEVLPYAIDSWSSHSAQYHPDNILVNKPTEQSSRWSSGSNNQMQFVSLKLDKVSIVHTITFGKYHKVHVCNLKEFKVFGGLEHNNMIELLHSGLRNDSEPETFPLKHKTNGVAFPCKYIKIVPLMAWGANFNFSIWFVQLNGIADQATVVGIKQDYDAYREREAIRLCLKHFRQRNYLDTFETLQKRTKICLEHPSLTELHERLVINGDFEHCERILTAAAKEGLFSEHIADCKYTPLWQRLSPLNRDGQASAEAPGMRGGHQMCIDVEGGIVYLIGGWDGQKDLADMWAYNIADNQWSLLSEDTGDQGGPGPRSCHKICFDDRRRRIYTLGRYVDPESRGSCNLKSDFYRYDIDSGTWTLISADTAEQAGPDLIYDHQMCLDPVSETLYVFGGRTISSKASDNIYSGLYGFHCPTGVWTLIRH* # PASA_UPDATE: g6096.t1, single gene model update, valid-1, status:[pasa:asmbl_5702,status:3], valid-1 NODE_31_length_58974_cov_41.1837 . gene 39170 41692 . - . ID=g6096;Name=g6096.t1 NODE_31_length_58974_cov_41.1837 . mRNA 39170 41692 . - . ID=g6096.t1;Parent=g6096;Name=g6096.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 41521 41692 . - . ID=g6096.t1.utr5p1;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . exon 41308 41692 . - . ID=g6096.t1.exon1;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . CDS 41308 41520 . - 0 ID=cds.g6096.t1;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . exon 40974 41104 . - . ID=g6096.t1.exon2;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . CDS 40974 41104 . - 0 ID=cds.g6096.t1;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . exon 39170 40558 . - . ID=g6096.t1.exon3;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . CDS 39364 40558 . - 1 ID=cds.g6096.t1;Parent=g6096.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 39170 39363 . - . ID=g6096.t1.utr3p1;Parent=g6096.t1 #PROT g6096.t1 g6096 MTGQSKCCPSQVDIGASGLSPEMYASALAFYRSVPCSAHGHPWNADHRTMYFDLWLKAFLAAFKLYAPLFFIPALLYQRKGLSSLALRTLPDTGRSAAFIATFATSFCLYFCVFRNLLGANYVPTNGFVPGFLASFSSLLIERKNRRAELALYCANHAASAVVNMLVSRGLVRRRQHMDGVIVASSLATLLYFHAKKPDHIGSGAGGLLTFLFGKEEQLTSTDNAGAKEGHAAPGGVDKGKRAEGSEGAAEAPLSTGTETPHVPGVPHTADDKRKKSRGNALVALLSARFLQLVPRDIKDTLSAEQPRHTTCPHRRNCLAYALAGLARSFGFGFAAKFTVALISGLVRGRPRKAVADAFGKKNLLTGAFLGVMVGGYRALVCGMRHVTGCERGRHHAIAGFVVGWATLLAPNHELSMWLVSKACEAAYYGAAEKGTVRRHYYGDLLLFSVACSILFHASMFEPHNVRKSYWEFLMSASTGRFSLLKRDHLDFLGYDSYRLARETAAAKAKRA* # ORIGINAL: g6089.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 15903 18146 . - . ID=g6089;Name=g6089.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 15903 18146 . - . ID=g6089.t1;Parent=g6089;Name=g6089.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 15903 18146 . - . ID=g6089.t1.exon1;Parent=g6089.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 15903 18146 . - 0 ID=cds.g6089.t1;Parent=g6089.t1 #PROT g6089.t1 g6089 MDRLTRLPAEIQEKIIIALYSMRDASALACTSSHWNRTVRSVQAREFALSLKAFHRSIAEFDAENVTDVPAVDENAGIPSPQSSSPHQRRSISPVRGYTAATNSEDRLHVACALDAMVEVDMPCGPIFVSLRRAFQQRVADIPQHWRWTFCMFPEPSPLNPTESAGGWIERVHSPAEAVCTAVYRAGREWPKTAVASTGAPTACTTEPKTEETATPTASASNAPTAAPLSPPATTTTTITTPKPVQSLMARRVTKREGGSDAHPFDARSFARALHALITDTRIGRNEVAIGLNLSSDRLARIRRVHVGASHLGVLPTALAEAKAGRGVRILTRRKGRAMGGDEDPVASSLLAETPLGHAFVNWKESALAGSGNHDQPMTTSRFVVHKLRSGGDADIDSDPCASMDGRFGRLVGAYDSAGDAFCALVRTLDKGPHTVDAREYKTFTRALCRAWRNYNTLHLMHGISDDESPEALAMQWDTYARRPSFSTVPDDANQTQLILRLDALASGNNATTTAFVRIATARIPDCNCPRVNPFFARLPHSNVPRRSVLGLPERLATAARECACARDELHAVEETHTFHDAKYATRASARRKQSSAKSSAIPRRCRENDPIAAITFRRTSTGVISATLRALSGSLPITAGVDSDASSDESYSGSKSEGDRGSAGAGAELVIVGDREIVTDARNGITAWGLTKRYMEKRLGMRAAAAAGVTHADAVTTAHTQQHAPGEPLVVRPSRRMWFFVEKISG* # ORIGINAL: g6094.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 35575 36747 . + . ID=g6094;Name=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 35575 36747 . + . ID=g6094.t1;Parent=g6094;Name=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 35575 35748 . + . ID=g6094.t1.exon1;Parent=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 35575 35748 . + 0 ID=cds.g6094.t1;Parent=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 35944 36096 . + . ID=g6094.t1.exon2;Parent=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 35944 36096 . + 0 ID=cds.g6094.t1;Parent=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 36409 36747 . + . ID=g6094.t1.exon3;Parent=g6094.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 36409 36747 . + 0 ID=cds.g6094.t1;Parent=g6094.t1 #PROT g6094.t1 g6094 MAPTSILGFVRGADLSGNAFEAKCVPERIKEMSNLFWIKLNKTGLQKLPEDITDLSRLEQLSIASNGIDEIESSVGKLVRLQMLSARKNKLTTDKIAPELFSIEELTTLDFSHNDLVELPVEIADARHLQILSVGHNRLTQLPGQMFVNCTEIHHLDLSHNKIDTIPPQLRRLTRLETLLLGSNPLGPSNLRSVFALTALQVCSSALYCASILLVFLFLVC* # ORIGINAL: g6090.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 19699 21917 . + . ID=g6090;Name=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 19699 21917 . + . ID=g6090.t1;Parent=g6090;Name=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 19699 19795 . + . ID=g6090.t1.exon1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 19699 19795 . + 0 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 19937 19993 . + . ID=g6090.t1.exon2;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 19937 19993 . + 2 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 20178 20351 . + . ID=g6090.t1.exon3;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 20178 20351 . + 2 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 20479 20640 . + . ID=g6090.t1.exon4;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 20479 20640 . + 2 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 20866 21006 . + . ID=g6090.t1.exon5;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 20866 21006 . + 2 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 21310 21413 . + . ID=g6090.t1.exon6;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 21310 21413 . + 2 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 21586 21714 . + . ID=g6090.t1.exon7;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 21586 21714 . + 0 ID=cds.g6090.t1;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 21858 21917 . + . ID=g6090.t1.exon8;Parent=g6090.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 21858 21917 . + 0 ID=cds.g6090.t1;Parent=g6090.t1 #PROT g6090.t1 g6090 MGGGYSSCTKAETIVKDVDLTGKVIFITGANTGIGRETARVLAGAHATIYLTCRDDTKGKETVDYIVTSTGNSDVHYLKMELGSLKSVRECAANFLALGKPLHILINNAGLVAPVLEKTEDGFESHMGINHLGPFLLTELLMPRLIESKPARVVNVASYAHTFAPINFDDLEYKTEAYSQWTAYGRSKAANILHAIGINQRYGSKGIKAISLHPGMIVTDIQRRGGVGMQVVMKLIYPFTKSIEQGAATSVFTAVHPSIDDAASPNSSAVYFTDCKPASASKHATDPAIVDQLWNFSVAATKSTASS* # PASA_UPDATE: g6095.t1, single gene model update, valid-1, status:[pasa:asmbl_5707,status:3], valid-1 NODE_31_length_58974_cov_41.1837 . gene 37286 39128 . + . ID=g6095;Name=g6095.t1 NODE_31_length_58974_cov_41.1837 . mRNA 37286 39128 . + . ID=g6095.t1;Parent=g6095;Name=g6095.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 37286 37709 . + . ID=g6095.t1.utr5p1;Parent=g6095.t1 NODE_31_length_58974_cov_41.1837 . exon 37286 39128 . + . ID=g6095.t1.exon1;Parent=g6095.t1 NODE_31_length_58974_cov_41.1837 . CDS 37710 38834 . + 0 ID=cds.g6095.t1;Parent=g6095.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 38835 39128 . + . ID=g6095.t1.utr3p1;Parent=g6095.t1 #PROT g6095.t1 g6095 MMHFPQSMPYGNPSSAFWPTSQHYASHYFAPIPTAPMNFNGNNADADAYSALLQLATQQPQLQQIQPAHASAMTNSAPHNSVQYHGGMVAAVAVQQPSHQMASMPARKRSASPGSSAGSLSPSPHPASEDSGISSPKADDLKSLSGESSTSNSVPKKNRVKRPMNSFMIFGQKHRASLQKMHPGKDNKAISKMLGDMWFSLGEAERKSYADASRDLAEEHKKLHPEWKFKRNIKKSKGARAHATHPSANAANIARTIAAAESHRFPGYRPVPCHASVNGPFVDGSHQQQQQQQQAFQQHRALYEPQTHYYAPPPQAPAHVGQFMMPPSPHMPTRMASPAISTGGVQGAQSTQQQPPVHPPLHQRIWSMADIIST* # ORIGINAL: g6093.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 32366 34915 . + . ID=g6093;Name=g6093.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 32366 34915 . + . ID=g6093.t1;Parent=g6093;Name=g6093.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 32366 34915 . + . ID=g6093.t1.exon1;Parent=g6093.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 32366 34915 . + 0 ID=cds.g6093.t1;Parent=g6093.t1 #PROT g6093.t1 g6093 MSQLPDLARMLATRGFAAMPPPLAAVGSIVASPPRASPNVTAALRAPMQKFVPSQSVRQHSTASPANHSGDLSVAAMYAMGGPTGDNTQQGGGQPAASNSITNPNSGNDKKKKKKKRPRGKAKVAGDTDGAAVTAPRDIPLARESDGKIGKAANAKHKKPQRKPTTNSGRAKGHVAKRAAFHPNAHVIDVLDPVSSLLEPSVDIADLLTAELQRGSGTGAVKKGGAAVDADGSGNGMLAATKEQRLKEENRRQHMQGQHQQLRNRISAAKQELQQQKHKPQQQQQQQQQQRQQRQQQQKRKPTPQQQQQQQQQQQQQQQQQQRHPTPGSDLMAAMSAALDITHEAPTSAPPKRKASDADLDDHASAVASKQRRVSTATPGGAAAAVVAKEATRPPVPCKFYMEGACHRGSSCTFSHDFVPTKKAEVCKFFRGGSCLKGELCIFSHDLGGVPCKYLNTKGYCSAGAACRFSHAPLSDEQKAAFLRELELPQGVSAGAGEGVVAEGASVVSAALQPPTVANPFAAASAILLGDDQDNTPDPFAPLPHVVDTPAAAVSTVPQSPMLENASPAVNVSGYRGFLPTRAAVTTLPARSAPFSFARAEPTVKSVPSSLGALSSTTTTAGVKTEAAFEDPFGFRSADGDDDGNAYAVFGGGFSNTHSMPAVPMPAVPMPVVPAVPATPSVAAEVHSAPVWSAPASARVQSLPSVPIGASGNPSPPAIPFHGLFAQAAHSSTFPASTPPVPSTAMPSSGPLSAMHDRASLAAPTGILTPPGRDVQPLSDPPIVGALAAGGVQSGRLSMDGSLGGAPSASTPATTAIVSPQKPPAPPKPFTVRPKVNVVDCFKDFDPDL* # PASA_UPDATE: g6091.t1, single gene model update, valid-1, status:[pasa:asmbl_5700,status:12],[pasa:asmbl_5701,status:12], valid-1 NODE_31_length_58974_cov_41.1837 . gene 22038 30013 . - . ID=g6091;Name=g6091.t1 NODE_31_length_58974_cov_41.1837 . mRNA 22038 30013 . - . ID=g6091.t1;Parent=g6091;Name=g6091.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 29767 30013 . - . ID=g6091.t1.utr5p1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 29742 30013 . - . ID=g6091.t1.exon1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 29742 29766 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 29183 29415 . - . ID=g6091.t1.exon2;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 29183 29415 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 28660 28818 . - . ID=g6091.t1.exon3;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 28660 28818 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 28214 28301 . - . ID=g6091.t1.exon4;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 28214 28301 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 27804 27934 . - . ID=g6091.t1.exon5;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 27804 27934 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 27592 27649 . - . ID=g6091.t1.exon6;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 27592 27649 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 27217 27260 . - . ID=g6091.t1.exon7;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 27217 27260 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 27017 27066 . - . ID=g6091.t1.exon8;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 27017 27066 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 26824 26887 . - . ID=g6091.t1.exon9;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 26824 26887 . - 1 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 26421 26526 . - . ID=g6091.t1.exon10;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 26421 26526 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 26068 26150 . - . ID=g6091.t1.exon11;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 26068 26150 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 25559 25874 . - . ID=g6091.t1.exon12;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 25559 25874 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 25293 25306 . - . ID=g6091.t1.exon13;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 25293 25306 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 24751 25072 . - . ID=g6091.t1.exon14;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 24751 25072 . - 0 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 24289 24615 . - . ID=g6091.t1.exon15;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 24289 24615 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 24083 24161 . - . ID=g6091.t1.exon16;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 24083 24161 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 23667 23806 . - . ID=g6091.t1.exon17;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 23667 23806 . - 1 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 23209 23257 . - . ID=g6091.t1.exon18;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 23209 23257 . - 2 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . exon 22038 23019 . - . ID=g6091.t1.exon19;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . CDS 22842 23019 . - 1 ID=cds.g6091.t1;Parent=g6091.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 22038 22841 . - . ID=g6091.t1.utr3p1;Parent=g6091.t1 #PROT g6091.t1 g6091 MADKRKLQAEVDRVLKKVTEGVEEFEMIWEKVNNASNANQKEKYEADLKKEIKKLQRLRDQIKTWLSSNEIKDKKILLDNRKLIETQMERFRAIERETKTKAYSKEGLEKAAKQIDANERKKAEVTQWIADTIERLQDQISQYETEVETLNVASKKKKGSAESTKMEHGIKQHRFHIEKLEQILRLVQVDVLGPQAVKDVEENVEYYLESSQDPDFMEDEGIYDELNLDELDAEYEAGAAMSSDDEEEEGEDGQPKPEKKEEKKEVVKPEAPLKEKEEEKKKPEPIPVVPASPVKKTAAAQQAQAAAAPAPASPAGKSKAPATVAPPAQAKVVAVAPPVAAPPPAKPQTQQAPPPVKPAAVTLPTAPPPKKEDPPKLTAGNAWQQNAAKQQPTAPATVAQPAAAAQPTAQTTAQSAPAKAAAATVPAPASALVTVATTAAQAAVSQPAAEVDDSKEKAKGKKQAAAAALSAQPAVASVPAAAQQAPTPNVTLPQPQPQPQQQPQPQPVVQLPPAQPQPSPSPFVPPQSHAAQQQQQQQQQQQQQQQQQQQQPTPQQQQQQQQVEVSPLPLPSPVGDAWKSQMLLDEHLQQQMAHLQVASPLDAQLQGVLHAGQGGQGQQGQQAPIGTPLQQPHPGQQQQAREMRADQSGLGGVDMSPFMEPGDALGSQHLHHPGVDNKLLAMQMLETSYRCMPEPIDSERTKIYIPRNPYPTPAYYPQVPSPMFENPALFDKFDTDTLFFIFYYQQGTYQQYLAARELKKQSWRFHKKYLTWFQRHDDPKDISDEYEQGTYVYFDYETGWCQRKKSEFTFEYRYLEDQELP* # PASA_UPDATE: g6087.t1, single gene model update, valid-1, status:[pasa:asmbl_5706,status:12], valid-1 NODE_31_length_58974_cov_41.1837 . gene 10646 12765 . - . ID=g6087;Name=g6087.t1 NODE_31_length_58974_cov_41.1837 . mRNA 10646 12765 . - . ID=g6087.t1;Parent=g6087;Name=g6087.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 12696 12765 . - . ID=g6087.t1.utr5p1;Parent=g6087.t1 NODE_31_length_58974_cov_41.1837 . exon 10646 12765 . - . ID=g6087.t1.exon1;Parent=g6087.t1 NODE_31_length_58974_cov_41.1837 . CDS 11106 12695 . - 0 ID=cds.g6087.t1;Parent=g6087.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 10646 11105 . - . ID=g6087.t1.utr3p1;Parent=g6087.t1 #PROT g6087.t1 g6087 MFRHPRRTQMARCGASTFGVVSAVLIFLAAASTVDALLHKNVVASPRTVVQANDLKTLAVGIITASHAAVHGHIGKRDISGRASCLDPAELVTMLSQSPKCMGVLGGIMAQSQGCISVSGGLLPTCDSEKLLVALVPSVLSSLAAFCDDGCGTIITNILAKCGGESLAGLVPGNETDITEMISSGLKLACGLVAPGSTCRPVIARMGASPQCVVDLVKISVDVGAVAQGTANDTRNGDDSSSIISGFISSALPYLTLMKTHTRALCSGSCGSIFVDFIKYCEPALEMLAGSVADVPALPVDVIDSLDGQVFDFMCTNDGHNAYCGEIIADAINRTLNDVMQAPNGLSGVDQYCILGATCSPACDAMLHGMSTYAGCCYAQLLDTMATLVPGLIKAQGASLPAGTDVLISVALKQVASGENKCGVKMPPACTANTNNGGGMHSPTRTGGDGSSASSDGKSSASVAGIVVGVIVAVVGVYFVLGFVYKRYAMGLKGADQIPHINTLRKLKLAKGTTADGRGGFMKLDEVEV* # PASA_UPDATE: g6097.t1, single gene model update, valid-1, status:[pasa:asmbl_5703,status:12], valid-1 NODE_31_length_58974_cov_41.1837 . gene 42067 45553 . - . ID=g6097;Name=g6097.t1 NODE_31_length_58974_cov_41.1837 . mRNA 42067 45553 . - . ID=g6097.t1;Parent=g6097;Name=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 44774 45553 . - . ID=g6097.t1.exon1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 44774 45553 . - 0 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 44130 44500 . - . ID=g6097.t1.exon2;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 44130 44500 . - 0 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 43208 43802 . - . ID=g6097.t1.exon3;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 43208 43802 . - 1 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 42949 43077 . - . ID=g6097.t1.exon4;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 42949 43077 . - 0 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 42496 42740 . - . ID=g6097.t1.exon5;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 42496 42740 . - 0 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . exon 42067 42373 . - . ID=g6097.t1.exon6;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . CDS 42316 42373 . - 1 ID=cds.g6097.t1;Parent=g6097.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 42067 42315 . - . ID=g6097.t1.utr3p1;Parent=g6097.t1 #PROT g6097.t1 g6097 MATTASIVRPESESGAFGKSEFARPFLDFIDDVRAKVGAELAKEIKLPSICVVGAQSSGKSALLQSLSGIKLPSGGGMVTKMALMLQIREMHESLDSKEEYAEICVPNDDKYGKKNRISIDDVAGEIEKITKAVVGHKSIEKERLINVTVYRRGQLCELTLIDLPGLTHAEGYGDDVREIVENYAKQTECVMLVVVNATTDVDASEAPKLARTHDEDGSRTVTVLTQCDLLRADETRMAHVARNLSAANTPGGSKGGMFAIVNTTKDGGARTQTIDAADSFFSDNRAFQSSGTRTKCGFANLVHHLQRIQSEQIRRVLPETFRLLLEARDVAEEELLALPDAFDDDVSRVAFVQKKFRNLADLLTNLTTNSVAGVPIDMSDEKRNDLKLNKHINESNKAFQVTVTERYSGRHFFSNAMFDKMKTYASEMRSTELSNIISNAAFVSAFHEEFRWLASKGAKRRGRVEGRVPTAATVPGKTEDDGSGPCYQLLQNRVAFLRRFLPTVVDTSKMNDFPALKTRTTTLLLDVLEHRVKDVERQLEEYLSQERQMPFTLNHYYMDTVEKISEKWRDQKHAYDSAKATPQRHTQVLPAEQFQVNDEVYDAPDPKLYELAVSNDDQAAVAMLINMQAYCKVMLKRVVDLVPMMLRDHLVVRLEMEVKSALDAMVTKERDDIIKHLTLETQEVSQRRTLAKERIESVKYVIDMASKSESLRDILAMSTSDILS* # ORIGINAL: g6084.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 412 1422 . - . ID=g6084;Name=g6084.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 412 1422 . - . ID=g6084.t1;Parent=g6084;Name=g6084.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 412 1422 . - . ID=g6084.t1.exon1;Parent=g6084.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 412 1422 . - 0 ID=cds.g6084.t1;Parent=g6084.t1 #PROT g6084.t1 g6084 MNGCFVRLSSRSPKDAAFCDPTQLHTEMDAAINALKDADRILSPDDESNARLQCVFACSFPSLRCVCGRDALRLLCTSERAFRDLLEALEAHEVYNAEIIVREWQSDLDPDFEFRGFVYNGALTALSQYNHYVYLPNVCARQKEIMEAIDTYWVAHVRPLLLKISADGSANSSVMDRPGNGDDGSVPAAPDIADKVLTTLPDYSACVVDFCMLKDGQVRVIELNPFHRTTGAALFDWTNDDALLRGESSQFGLEFRVNRVPLPSMGPMVDVLIENAVAQAALQSALDLLPVLGKNVSAATLTTTARATGSISSSLGRIPAEEKAHAGVLESKCTFL* # PASA_UPDATE: g6085.t1, single gene model update, valid-1, status:[pasa:asmbl_5705,status:12],[pasa:asmbl_5708,status:12], valid-1 NODE_31_length_58974_cov_41.1837 . gene 2235 3969 . + . ID=g6085;Name=g6085.t1 NODE_31_length_58974_cov_41.1837 . mRNA 2235 3969 . + . ID=g6085.t1;Parent=g6085;Name=g6085.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 2235 2309 . + . ID=g6085.t1.utr5p1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . exon 2235 2477 . + . ID=g6085.t1.exon1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . CDS 2310 2477 . + 0 ID=cds.g6085.t1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . exon 2604 2815 . + . ID=g6085.t1.exon2;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . CDS 2604 2815 . + 0 ID=cds.g6085.t1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . exon 2923 3200 . + . ID=g6085.t1.exon3;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . CDS 2923 3200 . + 1 ID=cds.g6085.t1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . exon 3346 3969 . + . ID=g6085.t1.exon4;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . CDS 3346 3884 . + 2 ID=cds.g6085.t1;Parent=g6085.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 3885 3969 . + . ID=g6085.t1.utr3p1;Parent=g6085.t1 #PROT g6085.t1 g6085 MASVLADRLVTAFVFGANNMCNVSDFSGFGDAQDDLVVGNSSHDNNRTMSFFDCLPAEIKWQIFSMLDYKSALNASAACREWHYFFRDELLWTAMNRRDAQAWRVFGNGSSRRTPDADASSWTLRHRYLVSAHMNATARQGNMWTARPPASVWTRGAAEIARWLPPKVSAAIGTTGKGNKRTMLAFGPALDSSAQHIVRDVMWGKHSPYVASGLSQGMNGVCAGVLLGRRDDPKREAIISFMALYTSTQSNREQYLNGNDPVPTIPTPASTLSASDADAHAGSLRNRILGSRAEQTMKTVGATLDVLVYLCDLDVGTDALRAESSLMELSAMLVRARPTTKLLVLLCNDRLDMNASAEQAAHAMHLDTVCGARPWLCATVNAATLEGVQMAFEWALLN* # ORIGINAL: g6099.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 54249 58041 . + . ID=g6099;Name=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 54249 58041 . + . ID=g6099.t1;Parent=g6099;Name=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 54249 54629 . + . ID=g6099.t1.exon1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 54249 54629 . + 0 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 54946 55811 . + . ID=g6099.t1.exon2;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 54946 55811 . + 0 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 55995 56202 . + . ID=g6099.t1.exon3;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 55995 56202 . + 1 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 56465 56612 . + . ID=g6099.t1.exon4;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 56465 56612 . + 0 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 56901 56997 . + . ID=g6099.t1.exon5;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 56901 56997 . + 2 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 57184 57281 . + . ID=g6099.t1.exon6;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 57184 57281 . + 1 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 57662 57747 . + . ID=g6099.t1.exon7;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 57662 57747 . + 2 ID=cds.g6099.t1;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 57907 58041 . + . ID=g6099.t1.exon8;Parent=g6099.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 57907 58041 . + 0 ID=cds.g6099.t1;Parent=g6099.t1 #PROT g6099.t1 g6099 MQALGLSCRGSHVLTLVTVTHWVPLYRIPWDLFIACRLSPASAECNFSVHGECAPHALDVCSAVKRASMTIESAPKLVFIKARGGKVLTTFTTHQEEPDEDSGAHTAGSGDGMEDGVVYTPQGKIRRVSGHEFKATFFKRPTFCDHCTGFIWGITKQGYRCQLCRFVTHKRCHKYVAACTMPRRGSVSSVTSVTSMASVVSGDSVSTVSTVSNAPTVVSEDSTAGVLSSSQSRGMRRAGSVKSKTRPRPTVPELRVDDTTAGAAHELHGSNSDASSDADLARSGSSDIATAGSTGRKRGASVTFRIVDDAGMPVHVAARPPLENSPAEDNMLAVSRGSSTGNCSSDNEDEGCGFDSRYSHTDVILGVGQFGVVKECIVRENGDHCAVKIVLKRRFRLRKKTLSDITSEIDILKSVCHPGIVRVMDVYETSRVLYIVMELIGGGDLLDYMLAKRKLEENEARHLSMQILVALQHLHDRGIAHRDLKPDNILLDMSKVIDPNDYRCIRIKLADFGFAKVVGEQSFMKSVCGTPAYVAPEVLLKKKTEKNASGYKLSVDLWSFGVLLYTALSGEHPFAEERDVEASLRIAFPRAQWEAVSSEAVDLIQGLLTVDPALRCTVAEALAHPWLQTPEIIAAHAALRQDALAIVPPASAVLLPLRPTRSPVTITTAPSS* # ORIGINAL: g6098.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 48232 52313 . - . ID=g6098;Name=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 48232 52313 . - . ID=g6098.t1;Parent=g6098;Name=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 52232 52313 . - . ID=g6098.t1.exon1;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 52232 52313 . - 0 ID=cds.g6098.t1;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 50186 52068 . - . ID=g6098.t1.exon2;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 50186 52068 . - 2 ID=cds.g6098.t1;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 49508 49906 . - . ID=g6098.t1.exon3;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 49508 49906 . - 0 ID=cds.g6098.t1;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 49129 49238 . - . ID=g6098.t1.exon4;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 49129 49238 . - 0 ID=cds.g6098.t1;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 48232 48883 . - . ID=g6098.t1.exon5;Parent=g6098.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 48232 48883 . - 1 ID=cds.g6098.t1;Parent=g6098.t1 #PROT g6098.t1 g6098 MRVSEPVGVGRLNAQSVTVPAESGTGRWAVSFFASLPTGIEADGDGFREHSFGESFDIDAHTTTEGGRVNGQAGSTLPPILAERARALSELAEKRRQQRALQKQQDEAQQLQQRKEEAAALAAANPHPPSGKKQRRKNNHADASDVSARLLEDSAPKPPEPTHAHSGRNYRGRKYRPSQQGTPSQGIDEGQDASQRDSPGKESGYSEDSHTSDAKEHQTGRRANKWEANRKQKMAADTSSLYDHLRKAELEHYYPKFHACGMTDVTLASLTMQDYSAYGVTSIEDKKRLFQLIQMLKSRLDSRMERAAAAASGVSAGGVEGGQGTPVRPLPSLPRHLMAGNGGSPRTPTKGQSTPGASGSANASPAGAGMTTTTITALSVNASPNNNNNNNNNNNSAAATTPKSLMRGSQQQQQQQQQQQQSHLLQQTPQPQFTSDTPVKERNVMLIETPNNRQNMFASDGTPVRHVSEGKYNYGVPGSKTGARGRAGSGAPLSIGDRIRVCVRKRPLSKKEINRGEGDIAEVEGRRQIAINEPKVTVDMKRYVQRHEFVFDDVFGERSSNEDVYRRTARPLVEWIFTGGKATCFCYGQTGSGKTHTMMGNEDVMGLYALASRDIFALVDSGTYGELDVWISFFEIYCGNLFDLLNERKKLHAREDAKQRVVIQGIEQKRVTRVDELMSVMRQGQGARSTGSTGVNSDSSRSHAILQIEIKTRDTGDKGKGAPVKSKGRFSFIDLAGSERAADTTDNDRQTRLEGAEINQSLLALKECIRALDMNSVHTPFRQSKLTQVLKDSFIGNSRTCMIANISPNMSSGEHTLNTLRYADRVKELKKDDDGDGEDLLLDDEPDDLILGHLSPLAPPALPRPAISTDSMESTATPSRQQQQQHHQSSSKKPSSGATPLNAGAKRDGAAPDSVSKGNRPSGVAAGTPKVVARAAAETSTPAKSTPIGRPPTHPNGHTNGSHARVPSGEERDHIALQHRSQIARLNDILGDSMALLREYEGAGLPSHAFGDYVARLEELLDEKMHAVRELREALHEVSSS* # ORIGINAL: g6086.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 5249 10260 . + . ID=g6086;Name=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 5249 10260 . + . ID=g6086.t1;Parent=g6086;Name=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 5249 5263 . + . ID=g6086.t1.exon1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 5249 5263 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 5413 5737 . + . ID=g6086.t1.exon2;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 5413 5737 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 5923 6026 . + . ID=g6086.t1.exon3;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 5923 6026 . + 2 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 6329 6464 . + . ID=g6086.t1.exon4;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 6329 6464 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 6818 6946 . + . ID=g6086.t1.exon5;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 6818 6946 . + 2 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 7265 7346 . + . ID=g6086.t1.exon6;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 7265 7346 . + 2 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 7550 7670 . + . ID=g6086.t1.exon7;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 7550 7670 . + 1 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 8013 8219 . + . ID=g6086.t1.exon8;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 8013 8219 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 8684 8752 . + . ID=g6086.t1.exon9;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 8684 8752 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 8845 8998 . + . ID=g6086.t1.exon10;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 8845 8998 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 9175 9305 . + . ID=g6086.t1.exon11;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 9175 9305 . + 2 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 9576 9725 . + . ID=g6086.t1.exon12;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 9576 9725 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 9976 10260 . + . ID=g6086.t1.exon13;Parent=g6086.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 9976 10260 . + 0 ID=cds.g6086.t1;Parent=g6086.t1 #PROT g6086.t1 g6086 MHRIAALSRLRLNITLGARALHSTSVLGHVDGRCGGTAQEDAPTAKATASAHPFNPVKTVIPNDGKTIEDFLRNSRVSSNETDDGRTAMSVVDSRNTFIPYVTRETVAGRGRKVFFETYGCQMNENDTEIVWSIMESNGFARTVELGEADVVLVMTCAIRDNAEKKIWARLDFFRSLKRKRSKKQPPLTVGVLGCMAERLKTKLLETDKMVDVVAGPDAYKDLPRLLHVVESGKKAANVLLSLEETYADVIPVRLDKDSLAAYVSIMRGCDNMCSFCIVPFTRGRERSRPVPSILDEVRHLSDQGVKEIMLLGQNVNSYRDRSGEDVESVAIVADDLSAPGDGDTVAPTMSRGFKTIYKEKSGGLLFADLIDKVSLVNPDIRIRFTSPHPKDFPDDLLHLVRERSNICKQIHLPAQSGSTTVLERMRRGYSREAYLDLVAHIRSILPDVCLSSDFIMGFCGETHDEYLDTLSLVEAVGFEKAYMFAYSMREKTHAHRRMVDDVPEDVKGARLASLVETFHRAAKARLARFVGSTQLVLIDKVNQRNENQLVGRTDGNVALSFPRTPVPCALTGASGIDLKAGDFVEVFVASATSASLSGNALRRTSLSVHAKATQPHVDNPLLMEHDRASVSVVV* # ORIGINAL: g6088.t1 original gene structure, not modified by PASA NODE_31_length_58974_cov_41.1837 AUGUSTUS gene 13295 15407 . + . ID=g6088;Name=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS mRNA 13295 15407 . + . ID=g6088.t1;Parent=g6088;Name=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 13295 13400 . + . ID=g6088.t1.exon1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 13295 13400 . + 0 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 13536 13592 . + . ID=g6088.t1.exon2;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 13536 13592 . + 2 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 13864 14037 . + . ID=g6088.t1.exon3;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 13864 14037 . + 2 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 14195 14356 . + . ID=g6088.t1.exon4;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 14195 14356 . + 2 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 14611 14757 . + . ID=g6088.t1.exon5;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 14611 14757 . + 2 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 15006 15112 . + . ID=g6088.t1.exon6;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 15006 15112 . + 2 ID=cds.g6088.t1;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS exon 15282 15407 . + . ID=g6088.t1.exon7;Parent=g6088.t1 NODE_31_length_58974_cov_41.1837 AUGUSTUS CDS 15282 15407 . + 0 ID=cds.g6088.t1;Parent=g6088.t1 #PROT g6088.t1 g6088 MGNQQTKFGKSSTADEVIQGVNLEGKVVLITGGNTGIGRETARVLASAKAMVFITCRDAAKGIEAVNSIKSETGNDDVHHIPLELSSFKSVRACADTFLATGRPLHILINNAGVFMSELKRTEENLEFDIGVNHFGHFLLTQLLMARLMESKPSRVLIVASDANARFPIDYDDINYHANPTKWSSFGAYIRSKTANILHAAAINKRYGDRGVEAYALHPGTVAVTEIARHLNVVLGALFALAYPFTKSIPQGAATSVFCATVSRPIGHPMPPLFMDCAPATPPADACDPAVG* # PASA_UPDATE: g6092.t1, single gene model update, valid-1, status:[pasa:asmbl_5709,status:3], valid-1 NODE_31_length_58974_cov_41.1837 . gene 30453 31740 . + . ID=g6092;Name=g6092.t1 NODE_31_length_58974_cov_41.1837 . mRNA 30453 31740 . + . ID=g6092.t1;Parent=g6092;Name=g6092.t1 NODE_31_length_58974_cov_41.1837 . five_prime_UTR 30453 30504 . + . ID=g6092.t1.utr5p1;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . exon 30453 30827 . + . ID=g6092.t1.exon1;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . CDS 30505 30827 . + 0 ID=cds.g6092.t1;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . exon 31044 31180 . + . ID=g6092.t1.exon2;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . CDS 31044 31180 . + 1 ID=cds.g6092.t1;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . exon 31336 31740 . + . ID=g6092.t1.exon3;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . CDS 31336 31604 . + 2 ID=cds.g6092.t1;Parent=g6092.t1 NODE_31_length_58974_cov_41.1837 . three_prime_UTR 31605 31740 . + . ID=g6092.t1.utr3p1;Parent=g6092.t1 #PROT g6092.t1 g6092 MLSSRLRLSLRAFTAVSRSVGAVAANVSSPGPSLCLSPSPFNHPHIFASYGAAFTTRQYSSKVESEELEISTPHKALDPVFKGSADDVEDAIGACNIAIPVHDPYKAWSFYHLTLGLPCTKKTEHSLTFNIAGHSLRCVAVDESYRQKDHFSPDTNHLPFPSVGFQVSLRDFHFLVNRIIEDTTNFVHHPTIVDENENTARWIMQLRDPSGNVIEFYSPLFPQEIYVKFQVIEKDPAAQTTI* # ORIGINAL: g3939.t1 original gene structure, not modified by PASA NODE_1503_length_10882_cov_40.8778 AUGUSTUS gene 3195 4829 . + . ID=g3939;Name=g3939.t1 NODE_1503_length_10882_cov_40.8778 AUGUSTUS mRNA 3195 4829 . + . ID=g3939.t1;Parent=g3939;Name=g3939.t1 NODE_1503_length_10882_cov_40.8778 AUGUSTUS exon 3195 4829 . + . ID=g3939.t1.exon1;Parent=g3939.t1 NODE_1503_length_10882_cov_40.8778 AUGUSTUS CDS 3195 4829 . + 0 ID=cds.g3939.t1;Parent=g3939.t1 #PROT g3939.t1 g3939 MIKIRRVFALLAITVGAVLTVSILIAVDLRSLVANHGQSQADNFKSKVATVGEYIGIKKWAAPIDEVPAAAQPPSILVPQHSAVGMVALARASAAVRSAFDGRTEIGRSPPTSLRLSLPGNHAAAAAVAVAPQLLKPTNTALIDDVPSASTNATLESAAAAETGTPTVSISSAISSVRVEPTTLPWPLRPDCAAVAGVIPRPKTILMYDLPFREFNCIPFLLCPVGNCVHVWGRDYLSTADAVVFWRHFEQLPAHMLQRPIEQVWIMVELEAPLRVKPVGMEALLSASTVPYNWTMTFHLASDVPTPSGSLSSVFQVPRQLGHLPEGTKAPGAKVLFLAHNCRSESNREDYVRALGAAIEVHSYGICLNNRKYLMLANGTALCPPERDRFMSAASIAFIAHYEFYLAFENEINVADYSTEKLWKCYQAGTVPIVLGRVSNPAFIPHPDAVIETADFATPRDLANYIRNCSYGTNCYTKHLAWRELPDALLNPSYLALVSTGMCELCRKLHEPRSPKSYENAYRWYVEATYGSEALSRYRNLQHP* # PASA_UPDATE: g3938.t1, single gene model update, valid-1, status:[pasa:asmbl_1806,status:3], valid-1 NODE_1503_length_10882_cov_40.8778 . gene 76 2570 . + . ID=g3938;Name=g3938.t1 NODE_1503_length_10882_cov_40.8778 . mRNA 76 2570 . + . ID=g3938.t1;Parent=g3938;Name=g3938.t1 NODE_1503_length_10882_cov_40.8778 . five_prime_UTR 76 123 . + . ID=g3938.t1.utr5p1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 76 202 . + . ID=g3938.t1.exon1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 124 202 . + 0 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 388 513 . + . ID=g3938.t1.exon2;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 388 513 . + 2 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 967 1331 . + . ID=g3938.t1.exon3;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 967 1331 . + 2 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 1578 1743 . + . ID=g3938.t1.exon4;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 1578 1743 . + 0 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 1919 2103 . + . ID=g3938.t1.exon5;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 1919 2103 . + 2 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . exon 2262 2570 . + . ID=g3938.t1.exon6;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . CDS 2262 2429 . + 0 ID=cds.g3938.t1;Parent=g3938.t1 NODE_1503_length_10882_cov_40.8778 . three_prime_UTR 2430 2570 . + . ID=g3938.t1.utr3p1;Parent=g3938.t1 #PROT g3938.t1 g3938 MRMCKQPLDDMVIENFLKLTLGMAFNEFIRSEFLKVGARETVEGIRATHTAQRVQDQAAKTLLMLNHPFDPSKLQPIISKSLKRKRMAELAASNSNNSNNSASGGAQQGVAPQSQPQSQSQSQTQSQSGQAGQQGQQGQSVGNVQSVWLKCFLDKDVRLLRVNVDVSFVDLLEKIRQKYGLNKFDDINVKYRDAAGDMIPMDDEDAIEYAFMCHGERVATNDSVKMELIISKISGANIKAPPPPPVVEEKALPEYASVRDVLMYEIRKGATLRKIDPAVLKEVAVIEPTDSRSKMLFEIKKGASLRSVDKSTIRDNSAPKRTPLADVAFSSDGSTIAEKMRKARRQLCASVVLEDSDMDDWE* # PASA_UPDATE: g3940.t1, single gene model update, valid-1, status:[pasa:asmbl_1805,status:12], valid-1 NODE_1503_length_10882_cov_40.8778 . gene 9350 10882 . + . ID=g3940;Name=g3940.t1 NODE_1503_length_10882_cov_40.8778 . mRNA 9350 10882 . + . ID=g3940.t1;Parent=g3940;Name=g3940.t1 NODE_1503_length_10882_cov_40.8778 . five_prime_UTR 9350 9780 . + . ID=g3940.t1.utr5p1;Parent=g3940.t1 NODE_1503_length_10882_cov_40.8778 . exon 9350 10882 . + . ID=g3940.t1.exon1;Parent=g3940.t1 NODE_1503_length_10882_cov_40.8778 . CDS 9781 10882 . + 0 ID=cds.g3940.t1;Parent=g3940.t1;3_prime_partial=true #PROT g3940.t1 g3940 MRRSWQRILKGAAGSAMSGAIRLPTVAANIVRRLFSINLRLRNGRTALSVGLLVVLLLCAAAALITSDVLQLPVSFKLSPSLSGTCNNAANGGTLGERNNEDTKHSGGIAGAAALRRPTSQNEPLPSHEEAFEQQWQELLNTPLDGTPLYAFRPPPTEANWRNWHVEQVRMGMGGKLEIARQESPSDATGRAWTTVPVPADAYFQLFVSVSCPFGRVLLNITDGGSDHLLLPFTYVNGATKHAKHYLFRSLTISEHVIIGFTIHGGTNGDHCILEELRLSLIAPTRNFIPPSFLLPNANVEASLATTARRPPWMLANAISSLYPFVNKIRVFLNGHETIPESLRDDPKIEVAMSRLWGDYGDANKFF # PASA_UPDATE: g11157.t1, single gene model update, valid-1, status:[pasa:asmbl_1446,status:12], valid-1 NODE_1393_length_11626_cov_38.1286 . gene 113 7198 . - . ID=g11157;Name=g11157.t1 NODE_1393_length_11626_cov_38.1286 . mRNA 113 7198 . - . ID=g11157.t1;Parent=g11157;Name=g11157.t1 NODE_1393_length_11626_cov_38.1286 . five_prime_UTR 7019 7198 . - . ID=g11157.t1.utr5p1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 6890 7198 . - . ID=g11157.t1.exon1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 6890 7018 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 6576 6680 . - . ID=g11157.t1.exon2;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 6576 6680 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 6228 6377 . - . ID=g11157.t1.exon3;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 6228 6377 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 5850 6034 . - . ID=g11157.t1.exon4;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 5850 6034 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 5485 5524 . - . ID=g11157.t1.exon5;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 5485 5524 . - 1 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 5036 5164 . - . ID=g11157.t1.exon6;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 5036 5164 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 4836 4899 . - . ID=g11157.t1.exon7;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 4836 4899 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 4591 4689 . - . ID=g11157.t1.exon8;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 4591 4689 . - 2 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 4297 4400 . - . ID=g11157.t1.exon9;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 4297 4400 . - 2 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 3884 4028 . - . ID=g11157.t1.exon10;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 3884 4028 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 3479 3600 . - . ID=g11157.t1.exon11;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 3479 3600 . - 2 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 3217 3366 . - . ID=g11157.t1.exon12;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 3217 3366 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 2816 2869 . - . ID=g11157.t1.exon13;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 2816 2869 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 2392 2505 . - . ID=g11157.t1.exon14;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 2392 2505 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 1971 2138 . - . ID=g11157.t1.exon15;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 1971 2138 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 1511 1669 . - . ID=g11157.t1.exon16;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 1511 1669 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 1171 1251 . - . ID=g11157.t1.exon17;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 1171 1251 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 724 848 . - . ID=g11157.t1.exon18;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 724 848 . - 0 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 387 519 . - . ID=g11157.t1.exon19;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 387 519 . - 1 ID=cds.g11157.t1;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . exon 113 176 . - . ID=g11157.t1.exon20;Parent=g11157.t1 NODE_1393_length_11626_cov_38.1286 . CDS 113 176 . - 0 ID=cds.g11157.t1;Parent=g11157.t1;3_prime_partial=true #PROT g11157.t1 g11157 MSSADWKEFFTPEGVPYYYNKKTKETSWDKPDALKTAADHDLGGDWVWCPHEIDAYIPAKAGPKLSDGSQRVQTEDGKNIDLPKTTKLFPLNRSSLKKNWDDLVQMDSIDEGMIIHNLRERFKKDIIYTNIGTILISVNPFKPLPLYTPTMIDKYYRKGIRTMPPHIFDIADAAYRTMVETKGNQSILISGESGAGKTEATKQVLSYLAEVAGSVDGIEQNILFANPILEAFGNAKTLRNNNSSRFGKWVEILFDKAGRICGARTSNYLLEKSRVIFQTKGERNYHIFVQICKGANESLRKKLQLDAPEKYRCLTKGECVVIDGLDDSAEFNEMTEAMDRLGIEGKEQALVFELVAGILHLGNVEFVANEGDRAEGSKIKDKKELEIAAKLFQVEVAVLEKAVNNRTMQVKGQDPMLIPLDPIKAADNRDALMKTVYGNLFDWLVRRLNKSMAPKGETSNLIGVLDIFGFEIFEKNSFEQLCINYANEKLQQHFNANTFSLEEALYQREQIKFTHVEFIDNQPCLDLIENRPEGILCMLDEEIKMPKGNDDTFLKKLHQTHTKKHERYIQPLKPPTAFSIRHYAGDVMYDTVGFLEKNKDTLQEDLLQAIESTKMAFLKELFPESSASNRKASLGSQFKGQLQSLMTSLNTTTPHYVRCIKPNSLKVPGKFDGLMSLLQLRYSGVFEAVRIRQTGYPFRYTHAEFFKRYRLLNRTVTGKSPKEQVSNLLASIGGDLSEIQTGITLVLYRAGPHRKLELLRSVELEKRAIILQS # PASA_UPDATE: g11158.t1, single gene model update, valid-1, status:[pasa:asmbl_1447,status:12], valid-1 NODE_1393_length_11626_cov_38.1286 . gene 7470 11183 . + . ID=g11158;Name=g11158.t1 NODE_1393_length_11626_cov_38.1286 . mRNA 7470 11183 . + . ID=g11158.t1;Parent=g11158;Name=g11158.t1 NODE_1393_length_11626_cov_38.1286 . five_prime_UTR 7470 7690 . + . ID=g11158.t1.utr5p1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 7470 7693 . + . ID=g11158.t1.exon1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 7691 7693 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 7913 8000 . + . ID=g11158.t1.exon2;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 7913 8000 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 8214 8326 . + . ID=g11158.t1.exon3;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 8214 8326 . + 2 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 8794 9129 . + . ID=g11158.t1.exon4;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 8794 9129 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 9338 9888 . + . ID=g11158.t1.exon5;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 9338 9888 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 10180 10306 . + . ID=g11158.t1.exon6;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 10180 10306 . + 1 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 10526 10632 . + . ID=g11158.t1.exon7;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 10526 10632 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 10819 10927 . + . ID=g11158.t1.exon8;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 10819 10927 . + 1 ID=cds.g11158.t1;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . exon 11157 11183 . + . ID=g11158.t1.exon9;Parent=g11158.t1 NODE_1393_length_11626_cov_38.1286 . CDS 11157 11183 . + 0 ID=cds.g11158.t1;Parent=g11158.t1 #PROT g11158.t1 g11158 MASEEQLRGLESLLGQLGTGQLEPSLKAQYERALMEFRAQPDAWRQCTYFLNNTDNPLVLFYSVSVFEALVYARWPQLPRSERNEIKTFLYNYYVGKFGAIPNFVSNKLAKVVVDISKWEWPQEAPEFFPSIFNMVDSGNTLAASAGVRLLLTVSEEYTSTRDDHNAARKQQLRALLEEQVPSIFDGLCRILEGLHTRCVVFGSPRPSPAGSPTAPNSPARFFSESFSSSRGGLSASSATSLFLSPPAMSFGGRKPAASASFDSETQPLALLCLETAQHLFSWVHLSNFMTQQLLSVLFRYASLRDDESSTVGISALACLCEMLEKSCTPADFEEFVMETFRQTFALLQSVVETADTSVDDSRDYLAKFTEFIGVFVKVQSRRITSTDRFPVLDFLALLLKYTFVQWEPEEYLLCLQVWDSFLDYLGEAARRPMEAASIVEGRYKNALAALLHGICSKVLYAHNAKALSDIDDISACEVAWAPLDS* # ORIGINAL: g7795.t1 original gene structure, not modified by PASA NODE_3868_length_2593_cov_35.0195 AUGUSTUS gene 286 2450 . + . ID=g7795;Name=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS mRNA 286 2450 . + . ID=g7795.t1;Parent=g7795;Name=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS exon 286 774 . + . ID=g7795.t1.exon1;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS CDS 286 774 . + 0 ID=cds.g7795.t1;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS exon 999 1136 . + . ID=g7795.t1.exon2;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS CDS 999 1136 . + 0 ID=cds.g7795.t1;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS exon 1361 1595 . + . ID=g7795.t1.exon3;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS CDS 1361 1595 . + 0 ID=cds.g7795.t1;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS exon 1900 1955 . + . ID=g7795.t1.exon4;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS CDS 1900 1955 . + 2 ID=cds.g7795.t1;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS exon 2187 2450 . + . ID=g7795.t1.exon5;Parent=g7795.t1 NODE_3868_length_2593_cov_35.0195 AUGUSTUS CDS 2187 2450 . + 0 ID=cds.g7795.t1;Parent=g7795.t1 #PROT g7795.t1 g7795 MRLFQRASLLGRVMSCLHDVLSASDTGGRSTFVMASQPSSLAHESSHSSMSCEASSRDTLCMSVASGWVSGSPLASVLGGWGDLWDDAVMQRELAERSGEFWRENASLQKSFMRPTRRALLGGPRSPVLTLSSGGMLSGTLSSHAFYLFSDVFVDVHSLSTRTMWSSTLHDLCLVWTADVADSGSVRHAFVITSPEDTLTLCARDEDGKLRWLSALDGAVRHAVDSTSALCTSHSPEPGFGGSFENFGAGGHAFAAPCRHCGVPLIVNAIDGSFHGPRRRRPSSKEGIDIVTRHCRYVFKTNVAYKDASYRGQWIKARPHGLGVLTFPDESVYKGAFRGGVREGYGHLRSPSGETYDGSWKMDKFQGFGTRRFVISIVDVCCSFFMLTVDPHV* # ORIGINAL: g13753.t1 original gene structure, not modified by PASA NODE_3091_length_4339_cov_36.1691 AUGUSTUS gene 558 4070 . + . ID=g13753;Name=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS mRNA 558 4070 . + . ID=g13753.t1;Parent=g13753;Name=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 558 650 . + . ID=g13753.t1.exon1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 558 650 . + 0 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 773 854 . + . ID=g13753.t1.exon2;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 773 854 . + 0 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 1072 1234 . + . ID=g13753.t1.exon3;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 1072 1234 . + 2 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 1575 1733 . + . ID=g13753.t1.exon4;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 1575 1733 . + 1 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 2112 2274 . + . ID=g13753.t1.exon5;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 2112 2274 . + 1 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 2454 2638 . + . ID=g13753.t1.exon6;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 2454 2638 . + 0 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 3020 3193 . + . ID=g13753.t1.exon7;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 3020 3193 . + 1 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 3451 3596 . + . ID=g13753.t1.exon8;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 3451 3596 . + 1 ID=cds.g13753.t1;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS exon 3943 4070 . + . ID=g13753.t1.exon9;Parent=g13753.t1 NODE_3091_length_4339_cov_36.1691 AUGUSTUS CDS 3943 4070 . + 2 ID=cds.g13753.t1;Parent=g13753.t1 #PROT g13753.t1 g13753 MADKEGLVALLRDTFVPEQERVKAANAELQALETRPGFAVTLLELSLVGVDDKSLLQGASIYFKNTVARHWGELSLSSDSERERNRYSIPQEEKAVIRENLITGIAHSAPFVRDQLLEALRIIVARDFPVRFPQVVDQIHSAFQASSIPSVLGGLHALLVITKQFEFKDTMEEYEPFARMMSVLQPMMRQIATAALQGYDAPGLTNVLHLITKILSRSVTMLIERELYAGAELNEWMEVMLRVMSLAELPSVAALDTDDRADDHFWKAKKWAAKFMFNFFVRHGVPKNQLNDHRPFAERYYQVYPQRTLAAIFGAVEHTKSGGYIAPKFFCNILNFIEECIQYKETWAFIRKHADLIVQQVLFPLMCFTDEDAELWEDDPRQYILQHFDYNGETYNPALAARNVYVIMLKYRAKAVLQTTLQFVFSILTT* # ORIGINAL: g9314.t1 original gene structure, not modified by PASA NODE_1754_length_9371_cov_33.3337 AUGUSTUS gene 2543 5333 . - . ID=g9314;Name=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS mRNA 2543 5333 . - . ID=g9314.t1;Parent=g9314;Name=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 5299 5333 . - . ID=g9314.t1.exon1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 5299 5333 . - 0 ID=cds.g9314.t1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 4443 5010 . - . ID=g9314.t1.exon2;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 4443 5010 . - 1 ID=cds.g9314.t1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 3685 3957 . - . ID=g9314.t1.exon3;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 3685 3957 . - 0 ID=cds.g9314.t1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 3303 3422 . - . ID=g9314.t1.exon4;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 3303 3422 . - 0 ID=cds.g9314.t1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 2861 2941 . - . ID=g9314.t1.exon5;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 2861 2941 . - 0 ID=cds.g9314.t1;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 2543 2713 . - . ID=g9314.t1.exon6;Parent=g9314.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 2543 2713 . - 0 ID=cds.g9314.t1;Parent=g9314.t1 #PROT g9314.t1 g9314 MIHSLFIANGSGEIFLERHWRGVISRNVCDYFFQALSKSSGPEDVPPVIVTPRAYLLTVYRNQVFFIAVVQSEVPPLFVFEFLHRIVDIFAEYFDGCTEGAIREHHVVCYQLLEEMMDNGFPLQTEANVLKELIRPPGLVRDVVNAVTGRGNVSSVVPTGQLSNVPWRRQGVRYAANEIYFDVIEEIDAIIDKNGTTVSVEVQGEIRSNCHLSGMPDLVLSFVNPRILDDVSFHPCVRFKRWEAERLLSFIPPDGTFKLVSYHVTTGSVVQIPIYVRPSISFTANGGHMDLQVGPKQTMGKSIEHVVISIPMPKSVVNVNFTATVGTYSFDPISKVVRWEIGKIPLQKLPKLAGSISLQANSPPPESPTITVDFKISQLATSGLQVNRLDLYGENYRPYKGVKYQTKAGKFQVRT* # PASA_UPDATE: g9313.t1, single gene model update, valid-1, status:[pasa:asmbl_2525,status:12], valid-1 NODE_1754_length_9371_cov_33.3337 . gene 387 1588 . + . ID=g9313;Name=g9313.t1 NODE_1754_length_9371_cov_33.3337 . mRNA 387 1588 . + . ID=g9313.t1;Parent=g9313;Name=g9313.t1 NODE_1754_length_9371_cov_33.3337 . five_prime_UTR 387 406 . + . ID=g9313.t1.utr5p1;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . exon 387 475 . + . ID=g9313.t1.exon1;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . CDS 407 475 . + 0 ID=cds.g9313.t1;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . exon 666 720 . + . ID=g9313.t1.exon2;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . CDS 666 720 . + 0 ID=cds.g9313.t1;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . exon 924 1588 . + . ID=g9313.t1.exon3;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . CDS 924 1318 . + 2 ID=cds.g9313.t1;Parent=g9313.t1 NODE_1754_length_9371_cov_33.3337 . three_prime_UTR 1319 1588 . + . ID=g9313.t1.utr3p1;Parent=g9313.t1 #PROT g9313.t1 g9313 MKNDKQFSKASNLCLGSVLWMAPEMATGSKPVSEKCDVYSFGIILWELLARSLPYQDELMHISTDALLDQISLNVLRPSPIPGGCDSFTIVMQQCWAQDPDERPAFEHVSEMLSGMDPDSFAKPNWRAGESLDTNRHVEVSVGDEDDTMVDAFAGQMSNELFTKVLRSISST* # ORIGINAL: g9315.t1 original gene structure, not modified by PASA NODE_1754_length_9371_cov_33.3337 AUGUSTUS gene 6154 9250 . + . ID=g9315;Name=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS mRNA 6154 9250 . + . ID=g9315.t1;Parent=g9315;Name=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 6154 7347 . + . ID=g9315.t1.exon1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 6154 7347 . + 0 ID=cds.g9315.t1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 7577 7697 . + . ID=g9315.t1.exon2;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 7577 7697 . + 0 ID=cds.g9315.t1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 8033 8164 . + . ID=g9315.t1.exon3;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 8033 8164 . + 2 ID=cds.g9315.t1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 8445 8606 . + . ID=g9315.t1.exon4;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 8445 8606 . + 2 ID=cds.g9315.t1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 8830 8898 . + . ID=g9315.t1.exon5;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 8830 8898 . + 2 ID=cds.g9315.t1;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS exon 9129 9250 . + . ID=g9315.t1.exon6;Parent=g9315.t1 NODE_1754_length_9371_cov_33.3337 AUGUSTUS CDS 9129 9250 . + 2 ID=cds.g9315.t1;Parent=g9315.t1 #PROT g9315.t1 g9315 MGTQTTSFGRSVELSVDSYDEPAPADVSFSSDTQAHLERKAVTGSRTSVHLREPHSSDEEEPDTPFYYSEGDDAEDGPDDGLSASGRYPPMSPRIRFTADSLEGVADYDYVDAFVLNHGGHTTDSDGEDLECESSPLHESGVLLDGYATPGGDLTKSPAAGRSRRGSSSHLANISRDGIEHDLYARVAAEAEASVARNRASNNNNNDNNNNNPGGLLGLFDSGMLLPLSNQIAADERIGGDGEGVAYNDASRAASVDGDSARRSPEGIISRNNSFPRENRAFFPNSQHSSSVVGGGIGSIAHVLQRGSSFTALATDDGGKEGRNEYSAATTTGAATTATTSTTTEYALASKICGIILHPLAAVTCVVGSAVAACTAAKEGVVDPCIDIAADVGGYWLTRVVDAAYPQSFVEKRIREKMAASQSYEEWQTHALELDRVQGKQAWKMEYASVDYDNELIHERLEELRSARKENDTNRMVFLLRSGLLRNLGGIGNLKLYGDCNVGTKKLIEQYIDEVVYQLNYIADSDVQGLSLKQKIDFFADTRQAFGRSALLLSGGGAMGVYHIGVLKALHELDLLPRIMSGSSVGSLVAALICTTTDE* # ORIGINAL: g8113.t1 original gene structure, not modified by PASA NODE_1993_length_8180_cov_39.6107 AUGUSTUS gene 5751 6275 . - . ID=g8113;Name=g8113.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS mRNA 5751 6275 . - . ID=g8113.t1;Parent=g8113;Name=g8113.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 5751 6275 . - . ID=g8113.t1.exon1;Parent=g8113.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 5751 6275 . - 0 ID=cds.g8113.t1;Parent=g8113.t1 #PROT g8113.t1 g8113 MLREQMDEYVEDEDEQDDEGEYEDEDEYDDEDDEYGDGDGFPEDGVSPMQLFASMMQMAMGGMAPPGMAMPGMGMPGMGMPGMGMPRMGMPGMERDRGGRGGGDELERLMGFGRVFLEQGMPAAVAALRAAEGRDAHGFPLPVPATAPPTGGDRGRGSINDDDAPMGYRLEEID* # ORIGINAL: g8114.t1 original gene structure, not modified by PASA NODE_1993_length_8180_cov_39.6107 AUGUSTUS gene 6329 7762 . - . ID=g8114;Name=g8114.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS mRNA 6329 7762 . - . ID=g8114.t1;Parent=g8114;Name=g8114.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 7550 7762 . - . ID=g8114.t1.exon1;Parent=g8114.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 7550 7762 . - 0 ID=cds.g8114.t1;Parent=g8114.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 6329 7318 . - . ID=g8114.t1.exon2;Parent=g8114.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 6329 7318 . - 0 ID=cds.g8114.t1;Parent=g8114.t1 #PROT g8114.t1 g8114 MPPPKSMPSAPSITKPRDLDRIFTAPQEAVIEDETAWDDESSFKGVTNAALSTILTHAVRGSSRRIMAYRSVSRGTHLGIYAKISLFGFTPVTLGAHFGLSGTPYDREVASLALTPEASSLGVAKFLGVARFATLSTSRGGASTMTSKVFDSLLTFRPERGGYLLVRLEIPSLSSYWPFVRATPDIALKYFFLRDVMFAAYPHEFRRFVDSVGLDALLSPPKEADAAMRTEKWLRLFAMKGDQLRALIDSPMQNATDVSRGTTGARGCTCRCCQREERRWLGSRCRLGRTDKKTMPSAEKLRSIAATTYFDALSARPEETPESLGKLVDAAWNVVCLTPGDDGGDDDGSDDDDQYEDDDDDDDDDDDDDDYEEEDEEDDYRPLGGAGSILTAYPDMRGWR* # ORIGINAL: g8112.t1 original gene structure, not modified by PASA NODE_1993_length_8180_cov_39.6107 AUGUSTUS gene 2625 4578 . + . ID=g8112;Name=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS mRNA 2625 4578 . + . ID=g8112.t1;Parent=g8112;Name=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 2625 2940 . + . ID=g8112.t1.exon1;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 2625 2940 . + 0 ID=cds.g8112.t1;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 3284 3419 . + . ID=g8112.t1.exon2;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 3284 3419 . + 2 ID=cds.g8112.t1;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 3686 3968 . + . ID=g8112.t1.exon3;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 3686 3968 . + 1 ID=cds.g8112.t1;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 4207 4578 . + . ID=g8112.t1.exon4;Parent=g8112.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 4207 4578 . + 0 ID=cds.g8112.t1;Parent=g8112.t1 #PROT g8112.t1 g8112 MAVVGIEPAPRDSLGMDAHAHINGAGATAANNSAAAPSNGNDILYIVDDYNSSAWIARDFSFAACYFLIAIVSLVMLVRSLHRSGLTAKWSTQKLFMLLTCIQTFSRTLFFTLSGIDRLQLYEGDRVVMAIFSSIPVMVYFSSFTVILFFWAQLYHFANGQSSGPVVVTSIFCNIVFYLTGAIYLCVLFGTDMDNVRAMNGYSYAVAVYAAFLALAFLLYGWRMYRVFDSITERIDYEGESQTTKVLIVTFTCIVSFTARAAFLFTYTGHLSAHLSASVAYFVICELAPTVAMVAIFRRLPDARNDGGNGRDFGGVIGGTTPSGSTLANPYSTFQRTPAVSFVHSRPAVPGIPFTGYRRLSTNPSTSG* # ORIGINAL: g8111.t1 original gene structure, not modified by PASA NODE_1993_length_8180_cov_39.6107 AUGUSTUS gene 262 807 . + . ID=g8111;Name=g8111.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS mRNA 262 807 . + . ID=g8111.t1;Parent=g8111;Name=g8111.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS exon 262 807 . + . ID=g8111.t1.exon1;Parent=g8111.t1 NODE_1993_length_8180_cov_39.6107 AUGUSTUS CDS 262 807 . + 0 ID=cds.g8111.t1;Parent=g8111.t1 #PROT g8111.t1 g8111 PPPQDYGYGHGAPAAYNQYAAAPGAAYGAHAPAAYGAPPAQQAPYGAPAAQQPYGAQPAPYGAAPAQTAPYGAAPAQPAPYGAAPAQPAPYGAAPAQPAAYGAYGAQTAPYGGYPPQQGAYDPNAHAQAYGAAPPQQQQQQQQQQYPGGYGSYDYGTAPTAGPAQPSPGRQPLGVHRYAPY* # PASA_UPDATE: g6509.t1, single gene model update, valid-1, status:[pasa:asmbl_7290,status:12], valid-1 NODE_4400_length_1667_cov_45.1564 . gene 1 1432 . - . ID=g6509;Name=g6509.t1 NODE_4400_length_1667_cov_45.1564 . mRNA 1 1432 . - . ID=g6509.t1;Parent=g6509;Name=g6509.t1 NODE_4400_length_1667_cov_45.1564 . five_prime_UTR 1297 1432 . - . ID=g6509.t1.utr5p1;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . exon 1221 1432 . - . ID=g6509.t1.exon1;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . CDS 1221 1296 . - 0 ID=cds.g6509.t1;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . exon 595 885 . - . ID=g6509.t1.exon2;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . CDS 595 885 . - 2 ID=cds.g6509.t1;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . exon 1 411 . - . ID=g6509.t1.exon3;Parent=g6509.t1 NODE_4400_length_1667_cov_45.1564 . CDS 1 411 . - 2 ID=cds.g6509.t1;Parent=g6509.t1;3_prime_partial=true #PROT g6509.t1 g6509 MTMLRLLLQLALCLAVLSTVSAQVVDSCAGIPSATFDTCVGRREKANNAFCGWCLKSTTELASCVSEVTYNANKALCAAGFLGYLVVGEDGKQYATSTIYDTKKRTGSWEVEESEIKVALRPGETLTVPVTVQPNQCKNLDFYYLLDITGSMRGDLDNLKKLASTFTSTVSKLCNPTNPNPSGCSNSACANVGFGTFADKPISPIGYWRALQDADKVNFGDVPGQAFFKDQTSTTAFNYVFRNSLSLTAAGDGSAFTNA # ORIGINAL: g1136.t1 original gene structure, not modified by PASA NODE_2361_length_6579_cov_90.7994 AUGUSTUS gene 176 364 . - . ID=g1136;Name=g1136.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS mRNA 176 364 . - . ID=g1136.t1;Parent=g1136;Name=g1136.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS exon 176 364 . - . ID=g1136.t1.exon1;Parent=g1136.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS CDS 176 364 . - 0 ID=cds.g1136.t1;Parent=g1136.t1 #PROT g1136.t1 g1136 MERRALVIVALAACVVVATAGDLPWLRVGKAVDGSSRLHIVDDNGRVVILRGVNVELDQRDVQ # ORIGINAL: g1138.t1 original gene structure, not modified by PASA NODE_2361_length_6579_cov_90.7994 AUGUSTUS gene 4854 5594 . + . ID=g1138;Name=g1138.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS mRNA 4854 5594 . + . ID=g1138.t1;Parent=g1138;Name=g1138.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS exon 4854 5594 . + . ID=g1138.t1.exon1;Parent=g1138.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS CDS 4854 5594 . + 0 ID=cds.g1138.t1;Parent=g1138.t1 #PROT g1138.t1 g1138 MRPDLKTGLWTDDERRRFLEGIAKHGRDWTAVAGHVGAGRSPIDYRHIASRIFRSLDRASGTRVTRLIRYTCEEDASIRIAVERHGRDWSKVAENVPVRSAANLRERYQKIMPQWMRVLYSPDVRMLLRALLRGDGDVESKLAAQFKDLDAAKGLVALELGMDDGSQVDWARVNGASGAERSAALDAVEKEIVPRVTAEEWKEGALAVWVPAWRWERPICTGRKSPIAAVANHPHIKPFVAATEGQ* # ORIGINAL: g1137.t1 original gene structure, not modified by PASA NODE_2361_length_6579_cov_90.7994 AUGUSTUS gene 767 2686 . + . ID=g1137;Name=g1137.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS mRNA 767 2686 . + . ID=g1137.t1;Parent=g1137;Name=g1137.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS exon 767 2686 . + . ID=g1137.t1.exon1;Parent=g1137.t1 NODE_2361_length_6579_cov_90.7994 AUGUSTUS CDS 767 2686 . + 0 ID=cds.g1137.t1;Parent=g1137.t1 #PROT g1137.t1 g1137 MVEGLAVMSTPFDALSIEVFVTHVAPHLSNRDIRSLAQINSVIRSQLQCECIYYLRDPLRFHLDADFRRDVLSVLPKARLAVVVRSRVGLWKVDSLSLRVLDGPENADVSALGDVHTLDIGGCNGVVDVSALGGVRNLLLSNCPRLVDVSALGGVHTLNLSGCERVVDVSALGHVHTLKLSYCKRVENVSALGAVHTLDLCDCIRVADVSALGGVHTLDLSRCAQVTDVSALGSVHSLNISYCNGVVDVSALASVHTLNASFCRRIEDVSALSGVHTLLLHGCSGVVDVSALHGAHTLSLCECDDVVDVCALGKVHTLNISGCLGVVNVSCLGGVHTLNLSGCEWVVDVSALGRIHSLDLGDCKRVQDVRSLGTVHTLSLSGCERVIDVSALGGVHTLNLSRCHMVVDVSMLGNVYALDLCGCNRVVDVSALGSVHTLSLGGCASVVDVSSLGGVHTLNLSGCLDVVDVSALGGVHTLDLCGCSGVVDVSALGNVHTLNLSYLDKLVDVSALQGVHTLILRGCNALVDASALGTVHELILSFCPGISDVTSLGSVHTLDLSVCSGVVDVSALGGVHSLFLVGCPNVVDVSALGSVHMLNLINCRGVVDVAALSGVKLLLREFCAPESFTDVGGRRILRA* # ORIGINAL: g13325.t2 original gene structure, not modified by PASA # ORIGINAL: g13325.t1 original gene structure, not modified by PASA NODE_2665_length_5516_cov_37.1929 AUGUSTUS gene 1615 5109 . + . ID=g13325;Name=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS mRNA 1615 2862 . + . ID=g13325.t2;Parent=g13325;Name=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 1615 2046 . + . ID=g13325.t2.exon1;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 1615 2046 . + 0 ID=cds.g13325.t2;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 2196 2312 . + . ID=g13325.t2.exon2;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 2196 2312 . + 0 ID=cds.g13325.t2;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 2728 2862 . + . ID=g13325.t2.exon3;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 2728 2862 . + 0 ID=cds.g13325.t2;Parent=g13325.t2 NODE_2665_length_5516_cov_37.1929 AUGUSTUS mRNA 1615 5109 . + . ID=g13325.t1;Parent=g13325;Name=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 1615 2046 . + . ID=g13325.t1.exon1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 1615 2046 . + 0 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 2196 2312 . + . ID=g13325.t1.exon2;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 2196 2312 . + 0 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 2728 2858 . + . ID=g13325.t1.exon3;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 2728 2858 . + 0 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 3501 3611 . + . ID=g13325.t1.exon4;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 3501 3611 . + 1 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 3890 4052 . + . ID=g13325.t1.exon5;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 3890 4052 . + 1 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 4566 4625 . + . ID=g13325.t1.exon6;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 4566 4625 . + 0 ID=cds.g13325.t1;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS exon 5005 5109 . + . ID=g13325.t1.exon7;Parent=g13325.t1 NODE_2665_length_5516_cov_37.1929 AUGUSTUS CDS 5005 5109 . + 0 ID=cds.g13325.t1;Parent=g13325.t1 #PROT g13325.t2 g13325 MDSLPATVEASDAKAPSEVMHSGTTAPMDATHVDASPPAVPTAVEIASNDVAMKVDAEAIGMEAPAQLNAAGDSAPETVAATTMETDGDADDGGTHCDYVKIMIQNLPRYHGVKDVRKLLGSLEINYVRAHKTPKWTYAFVTHKTEEDRAAAIAKLTGHVVKGCSLSAKPVKQHEDPCAGLSDPKQFRKRTNEAADNDDENAPKRQKFDDSIPAEDRIVSNVTPWAE* #PROT g13325.t1 g13325 MDSLPATVEASDAKAPSEVMHSGTTAPMDATHVDASPPAVPTAVEIASNDVAMKVDAEAIGMEAPAQLNAAGDSAPETVAATTMETDGDADDGGTHCDYVKIMIQNLPRYHGVKDVRKLLGSLEINYVRAHKTPKWTYAFVTHKTEEDRAAAIAKLTGHVVKGCSLSAKPVKQHEDPCAGLSDPKQFRKRTNEAADNDDENAPKRQKFDDSIPAEDRIVSNVTPWADVPYEEQLARKKEAMNKVLKKITASFKNDESKPTWVDGLNGAPCCPLEDTLPSPKLNGYRNKYEFAIGFNYDGVPTAGFMLGSYKDAILAVAEPTKCPNTSDLAKAICGNMQAFVRTSSRPPYNRVSHKGFWRQITVRETFTEGKM* # PASA_UPDATE: g13324.t1, single gene model update, valid-1, status:[pasa:asmbl_4752,status:12], valid-1 # PASA_UPDATE: g13324.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4751,status:12], valid-1 NODE_2665_length_5516_cov_37.1929 . gene 245 1139 . - . ID=g13324;Name=g13324.t1 NODE_2665_length_5516_cov_37.1929 . mRNA 245 1139 . - . ID=g13324.t1;Parent=g13324;Name=g13324.t1 NODE_2665_length_5516_cov_37.1929 . five_prime_UTR 1098 1139 . - . ID=g13324.t1.utr5p1;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . five_prime_UTR 810 839 . - . ID=g13324.t1.utr5p2;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . exon 1098 1139 . - . ID=g13324.t1.exon1;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . exon 774 839 . - . ID=g13324.t1.exon2;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . CDS 774 809 . - 0 ID=cds.g13324.t1;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . exon 245 497 . - . ID=g13324.t1.exon3;Parent=g13324.t1 NODE_2665_length_5516_cov_37.1929 . CDS 245 497 . - 0 ID=cds.g13324.t1;Parent=g13324.t1;3_prime_partial=true NODE_2665_length_5516_cov_37.1929 . mRNA 245 1139 . - . ID=g13324.t1.1.5b6be70b;Parent=g13324;Name=g13324.t1 NODE_2665_length_5516_cov_37.1929 . five_prime_UTR 1098 1139 . - . ID=g13324.t1.1.5b6be70b.utr5p1;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . five_prime_UTR 810 836 . - . ID=g13324.t1.1.5b6be70b.utr5p2;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . exon 1098 1139 . - . ID=g13324.t1.1.5b6be70b.exon1;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . exon 774 836 . - . ID=g13324.t1.1.5b6be70b.exon2;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . CDS 774 809 . - 0 ID=cds.g13324.t1.1.5b6be70b;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . exon 245 497 . - . ID=g13324.t1.1.5b6be70b.exon3;Parent=g13324.t1.1.5b6be70b NODE_2665_length_5516_cov_37.1929 . CDS 245 497 . - 0 ID=cds.g13324.t1.1.5b6be70b;Parent=g13324.t1.1.5b6be70b;3_prime_partial=true #PROT g13324.t1 g13324 MLARSAVGAVSALRVGARALRTSAPRLSAPASARYQDALLNVPETKVTTLKSGLRVASANTGHETATVGLWIDAGSRFENAQTNGVAHFLEHMAFK #PROT g13324.t1.1.5b6be70b g13324 MLARSAVGAVSALRVGARALRTSAPRLSAPASARYQDALLNVPETKVTTLKSGLRVASANTGHETATVGLWIDAGSRFENAQTNGVAHFLEHMAFK # ORIGINAL: g13720.t1 original gene structure, not modified by PASA NODE_495_length_22446_cov_42.6638 AUGUSTUS gene 384 4208 . + . ID=g13720;Name=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS mRNA 384 4208 . + . ID=g13720.t1;Parent=g13720;Name=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS exon 384 952 . + . ID=g13720.t1.exon1;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS CDS 384 952 . + 0 ID=cds.g13720.t1;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS exon 1187 1337 . + . ID=g13720.t1.exon2;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS CDS 1187 1337 . + 1 ID=cds.g13720.t1;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS exon 1707 2743 . + . ID=g13720.t1.exon3;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS CDS 1707 2743 . + 0 ID=cds.g13720.t1;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS exon 3029 4208 . + . ID=g13720.t1.exon4;Parent=g13720.t1 NODE_495_length_22446_cov_42.6638 AUGUSTUS CDS 3029 4208 . + 1 ID=cds.g13720.t1;Parent=g13720.t1 #PROT g13720.t1 g13720 MGVEVKIDDLTFRSNFDSGNLARVEKHVRQPSFVDENGDPSPPYDEYNCWTSPDCAGTEFENGNRTWFYFAVDGGTKGRTIRINIMNMNRQGKLYSQGMVPVVKVVPGSDGWERMSERPSFVLTDTSMRLSFYYTFERDSISTDHVTTYFAFCFPYSYEDCQRYLEAIDGRFSEESEGVEVTPTSIYYHRDLLCRSLDGRRVDVLTISSHEGLLDAHEPVIENGFPDGQDTRANQFEGKKYFFISARIHPGETPASHVLRGFVEFLLDEDDARAAELRRRFVFVIVPMLNPDGVFRGHYRTDQRGVNLNRVYDNPDVHTHPSVYGVKHLLRSIASRYTLQYYVDLHGHAVKRGCFIYGNSLDVVSQIDNILYPRLISLHSPHFDFEACNFSEKNMVARDKKDGLSKEGSGRVSMLKDLGVAQSYTLECNYNCGRMTNSIPPATGEEGRSTPAGQFGPPTFFTEESFKGVGRALLHAALELENANPYSRIPRSEHPTLADWRRWAEGYVRSSLPYRMMPTVTRMGPIIRADGTRAEPDEKRPSFGTRRTTIGEGLIASRQNSRTQLEKTAVAGAGATKLPTTHDGVSRDTARFLTRRAERLVRTVSDNRMVVGKSVVSADGEQLPKDVPATVLASHREIDVRTPSTRSVPSSASNLVRGITGKPAAGPKPSGRETSLAGGPLQKHMVGFEGVRPLKKPAAVTGHAGGTSGVTASIEARPPTRVAREKGVEPWSVAGHHVDPLVKIEQPAKKFVAPSPTRVNHQGPRSPQPQPTLPKPNPAGPKEVSTSRTSGRGAGAGHTGAASRKSAVGRGIALPPTQSTASATTSSGAKGVAVTRKTSTVAAAKNVAMKSRTSKVGPVSAVAAEVPVDSTSSPVDGVHGSRETIYLDEGATGRADDGGSALVDGDGDSGFAWPPMGAGDGDDDEDRPFVWDESGAEDNDAEQEPHAPSDDAKSASPSSRSSSRPASAADELQEAAGE* # PASA_UPDATE: g13721.t1, single gene model update, valid-1, status:[pasa:asmbl_7750,status:12], valid-1 NODE_495_length_22446_cov_42.6638 . gene 5138 19785 . + . ID=g13721;Name=g13721.t1 NODE_495_length_22446_cov_42.6638 . mRNA 5138 19785 . + . ID=g13721.t1;Parent=g13721;Name=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 5138 7981 . + . ID=g13721.t1.exon1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 5138 7981 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 8215 8594 . + . ID=g13721.t1.exon2;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 8215 8594 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 8783 9206 . + . ID=g13721.t1.exon3;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 8783 9206 . + 1 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 9352 10230 . + . ID=g13721.t1.exon4;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 9352 10230 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 10365 14606 . + . ID=g13721.t1.exon5;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 10365 14606 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 14820 16085 . + . ID=g13721.t1.exon6;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 14820 16085 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 16309 18909 . + . ID=g13721.t1.exon7;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 16309 18909 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 19106 19217 . + . ID=g13721.t1.exon8;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 19106 19217 . + 0 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . exon 19418 19785 . + . ID=g13721.t1.exon9;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . CDS 19418 19521 . + 2 ID=cds.g13721.t1;Parent=g13721.t1 NODE_495_length_22446_cov_42.6638 . three_prime_UTR 19522 19785 . + . ID=g13721.t1.utr3p1;Parent=g13721.t1 #PROT g13721.t1 g13721 MDNRYDDGSDLVEMPPIDMNEIAAVRARSARTRSARVGGEKGDQRGQRRSESAFDGSITDVSQLTTRLYANAEQQSSIILRSMCSRADDNNNASPATPGMNSSFGDSSVSVVPHPPEYPPEGSKSFYRTTIFRNDRSTRKDRAKSAPAPPQHPLFMFAHPPASANAPAPPATSRAHRTPHEGRQATRSPEDDEDADRTQSPMGVKGPRAAWAQPVVPVPPSQPRDARATKPSLSPETDELDDVFGAAARPSNTGKGAGAERHQSPDHVMFAPSATASPTKELSRALQRGFPRPSTSSGANGSTAAEEVHKRPSTTTGTRPHTTTGRASSMSAATASSKRGKSAVERTVSLMEPSDVMAIVEQMRENGADSTEFVYLIRIQNPRNPADYNPYKLRVVPHADVDRNDFYTLSVSGMTHVLNGQAEFTSLPQWLRERASFNRLKEIPLIAKYRLWKSYKTWRTNVRSAKIRHCKELLDRRLFILNPTLREALLGIRNMCQELSVLRLHHVDTRTTYPLSQFCQTQQEQMEYVRANLAQFEETVSDVVCEACEISLENAGFIDDPNARDENGEPIKPTYTELARKRSECRKLTSFIKLADYLIIDTLHDLTSTSVSDLLNHMRPAEDRRASSHPNGVNGEGDGFRDPILYGDAPVEAGSSGRNDKRASVVGKLPKDAVETLKRSPLLRLELIMEADVLTFTPNIDEVQAKTSSIIEGFLDVVQSVGRLVASERFSPYTSPGGINDGIEAGEMDEGPDLNEIFEDDEQYQTLTGQIRTAIAHAFRVAENFSEVFLPLRDMVIENRKMRIEQVRSSNPEVLYFSNAMAKYHAQIRDIEGMPISSEVGIIMVDTRALKGAFLPSPKRCLQDLERLLPELAHARNETLLSVIKESVGRLETVPRSVEEFVEHLNHLQQVNDNMNSIQDTYSYVAKMHELMDVYRVSPPPEEYALYQTLVPSLSQLKAALAYSEATKEDLISKFSVELERNTAQLKGRILELKNSVLEPRMLNSDCDHDEVMQMLGELTEKMESLRHTAADYDSYQQTFSIPLTQYEELDEAREELELRRLLWTSLREWDELREAWDNTAFEAVDAEMIAGHVARFTKTTYQLERKLPPNTTVPKLKALVDGFRTGLPAIQDLRNPALKSRHWESIQDVIGQRVVRNETFTLGQLLEFKVFDFKEPIADISAQATNEATLENMLKKVEQAWATTEFIIIPHRDSKDVCIVGGVDDILTLLEDSQVTVSTIRGSRYVAPIKNSVEEWDRQLALFAETLDEWTRCQRNWLYLENIFTAPDIQRQLPNEARLFALVDKSWKDIMRKTRDNPNALKAGTAPGVLEALRTNNAHLEDIQKCLEDYLETKRLVFPRFYFLSNDELLEILAQTRNPHAVQAHLRKCFDNIARLEFSPEARSIDILGMVSSEGERVSLGKNLKARGNVEAWLGNVETAMVQSLRRLLKGALVEYGRRSREEWILDQPGQVALTAAQIIWCRETTRCLSGDAGAVESLRLLREEWIENLSSLAALVRGDLTAVQRASIGALITIDVHARDILGELHAAAAQSQHDFEWTKQLRYYWDQDEDNCVVQQTNSSFTYGHEYLGCTPRLVITPLTDRCYLTLTGALHLHLGGAPAGPAGTGKTETVKDLSKALAKQCLVFNCSEGLDYKMMGKFWSGLSQSGAWCCFDEFNRIDLEVLSVIAEQIRTIKSAKDVGAQRFVFEGREIKLNPTCGFFITMNPGYAGRVELPDNLKALFRPVAMMIPDYGLIAEIILYSEGFEQAKELSQKLVSLYKLANEQLSRQDHYDFGMRAVKSVLTMAGSLKRSNPTSSEDILLIRSLRDSNLPKFLAEDVPLFEGILADLFPGVQMPVDDFGAVQEAILSALAEGKKQAVPLQIAKTIQLFQTMNVRHGVMLVGPTGGGKSTCHVTLARALNILKEKSGKHEGVRTYTLNPKSITLGELYGRFDPNTLEWTDGLLASLVRASVADSSPMQKWVICDGPVDSLWIENMNSALDDSKLLCLANGERIQLTPTVRMMFEVEDLSVASPATVSRCGMVYIDAGELGWRPYVRSWSHRLPVQLSDDCREHVIALFEQFVDQGLKYIRSLENPEYIPSIDLNLVSSLCALFESLVRPGRGLNYDLDTLSTNSILTCVFVFSYVWSIGGNLADGRQDEFDSIAREMFEGLPGIRIPSQKTLYHYYVDLRNGDFMAWDHSLTNFKYQKDTPFLSILVPTVDTIRFSYILRALVDAGRPVLFGGTTGVGKSSIVTDFLAASTSESAGDARVDSIAMQFSAQTDSNRIQNIMVSKLDRKRKNVLGGHNGRRMLLFVDDLNMPQKEKFGAQPPIELLRQYLDCGGFYDRQRLQWLEVQDVTLMAACSPPGGGRSAVSPRLFRHFNMLSLPRPSEDTLRHVFGGILEGFVDAHHFSDEVRGAARGIVAASVELYTRLCADLLPTPAKSHYTFNLRDLSKVIQGMLQADPLNLKTRDGFLRLFVHEASRVYHDRLIDKGDKLYFYTQVSQLLARQFSLSWAPERFIEKPILFGDFLEGVGSSNRTYREIEDMARLTRTLEEYLDDMNSATNKSQRLVFFMDAIEHVSRISRMIRQSGGNALLVGVGGTGKQSLTKLACHMAGHKCFQLELTRGYGYPDFREDLRRLYRMTGIQGSSAVFLLTDGQIIRESFLEDINAMLNTGEVPNLFEAEDYEQIITDIRPIARAAGLPEGRDALYRLFIQRVRERLHIVLCMSPVGEAFRRRCRMNPSLINCCVIDWFSAWPREALLSVSQRFLDAVDLGAPTHAENQALRNKVSEMCVEVHVSVTEASKRYYQELRRHYYTTPTSYLELINLYTSVLDEKRMELRTNRDRLRSGLGKLEETNAMVNRMQEELSALRPELESKARDTETLLMRLAQDQESVDAVKRVVEQEEAIVRDQANECEAIAAEAQRDLDEALPALDAAISALDSLDKSDIAEIRVYTKPPEMVMTVMEAVCVLLQEKPDWPTAKTVLSDNGFLKRLMSFDKSHIPGSVLGKLKKYVENPSFTPDNVGKISVACRSMCMWVLALDKFAKVFKVVEPKRQRLEQAQVFLEEARETLQEKQSALFEVRTKLEELRLHYEQSLAAKEQLAERIDETSKKHERASKLTTALADERTRWAETVAQLDRGIANLVGNIFVSSACVAYFGAFTSSYRRDLVSAWILQCKAVGLPVSENYSLVGVLADPVKVRDWNIGGLPTDSHSTENGLLVSRGRRWPLMIDPQGQANRWVRNMESKNGLRIVKQTDANYLRTLENAIRIGSPVLMEELGEELDPALEPVLLKQTFKQGPRMLIRLGDSDIDYDKNFRLYLTTKLANPHYMPETCIKVTIINFTVTQEGLEDQLLGDVVKAERPELEELRNSLIVRMAEDKKQLRAIEDRILHLLFTSQGSILDDEVLINTLNDSKATSAVIQSRVRESEQTEAEINSARSAYLPVAIRGTVLYFVIADLAEMDPMYQYSLKYFTALFNHCIRASEMSSDLGQRLQTLLTNITATIYGNVSRGLFERHKLIFSFLIAVQIQRKAGIISDAEWSFLLRGPSFMASEGRASQPEYRWLTKGMWRSFSFLDQNLPAFKGIAADLSENPAVWEAFAGSENPFRAQLSKAWESLNPFRHLILVRVLAEDKLTRAIGEFVVQTLGRTFVESPPFDLGRAFQDSSPATPLIFVLSEGSDPAGSLLRFAADRNYTNRMHMISLGQGQGAVAEELIARAIRSGDWVFLQNCHLASSWMVSMEALVSEFSSPEAELHPDFRLWLSSMPAKSFPVSVLQNGVKMTIEPPRGLRANLKRSFGEMTDAEFEDTKAGRHWKKMLFALCFFNAIIHERKKFGPLGFNIKYDFTVSDLEVSMSFLRMYLADKTEVPWLALRYLTGDIVYGGRVTDDWDRRCLKAVIARFYKPEILEDRFPLAEGNDYFVPPTGMLESYRRYIDGLPLSDAPEVFGMHENASIAHNVGEARSLIQSILDVQPRLSSAGASSSSSGDSIDDTVLAMANDMLESLPPTFDFSQAHPSLLVANERGRMNSLTTVLRQETVRFNRLLSIMRQSLESLVKAIKGLVVMSADLEAMFNSFINNHVPVMWSSAAYASLKPLGSWVRDLAQRCDFMRDWLTLGQPKTFWISGFFFPQGFVTGTLQNHARLHNVPVNALRFSYTVLKYDAEYVQEAPAEGVLMHGLYLDGARWDRGNERLAESIRNEMFSRMPVIHLLPTLATSTDEDKYISPMYKTSARAGVLSSTGLSTNFVMSIALTSQESSDFWTLKGCALVCQLND* # ORIGINAL: g9781.t1 original gene structure, not modified by PASA NODE_1563_length_10464_cov_44.3116 AUGUSTUS gene 100 1284 . - . ID=g9781;Name=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS mRNA 100 1284 . - . ID=g9781.t1;Parent=g9781;Name=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 1238 1284 . - . ID=g9781.t1.exon1;Parent=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 1238 1284 . - 0 ID=cds.g9781.t1;Parent=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 537 677 . - . ID=g9781.t1.exon2;Parent=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 537 677 . - 1 ID=cds.g9781.t1;Parent=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 100 324 . - . ID=g9781.t1.exon3;Parent=g9781.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 100 324 . - 1 ID=cds.g9781.t1;Parent=g9781.t1 #PROT g9781.t1 g9781 MVVEREGDGGRPDHDRQIGGTAESQIGEDTPVHAIASDPSNGHSPRTAARRGPGNLIIVEENQMAVVPALTAHRARAPPGVVTVCAILTLVAAFGASIATAQRFRANNATLYCPLKYTFTGTGSNAEAYGFSIAYDN # ORIGINAL: g9783.t1 original gene structure, not modified by PASA NODE_1563_length_10464_cov_44.3116 AUGUSTUS gene 7590 9762 . + . ID=g9783;Name=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS mRNA 7590 9762 . + . ID=g9783.t1;Parent=g9783;Name=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 7590 7838 . + . ID=g9783.t1.exon1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 7590 7838 . + 0 ID=cds.g9783.t1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 8012 8268 . + . ID=g9783.t1.exon2;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 8012 8268 . + 0 ID=cds.g9783.t1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 8537 8690 . + . ID=g9783.t1.exon3;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 8537 8690 . + 1 ID=cds.g9783.t1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 9062 9111 . + . ID=g9783.t1.exon4;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 9062 9111 . + 0 ID=cds.g9783.t1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 9401 9565 . + . ID=g9783.t1.exon5;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 9401 9565 . + 1 ID=cds.g9783.t1;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS exon 9723 9762 . + . ID=g9783.t1.exon6;Parent=g9783.t1 NODE_1563_length_10464_cov_44.3116 AUGUSTUS CDS 9723 9762 . + 1 ID=cds.g9783.t1;Parent=g9783.t1 #PROT g9783.t1 g9783 MASISPICRFMSRPCAILAAARSHTSAGIAISRRFTSSAARTTHKTHGDGGDSWSYWTLASRIAAGAVAAVAVVGGMHVAAKEEHAHTEPASHSTTHHPTNVIDAHSVGRPAMHVDGNDVPAWLEALRSDPALTVYVPSKLFPAHGDHFILDSLNGPGKIQAYEVYHDKESQKMFSVVHIGRIMCGHRGLVHGGALASIIDDSFGWLFMTSFGNGFTANLSVDYRKPVPADGLYVFRSQVERTEGRKCWLKGTLEDGNGTVHVEATGLFITPRDAGKPLYRLHVNEQQQSDSTATPATTVTASH* # PASA_UPDATE: g9782.t1, single gene model update, valid-1, status:[pasa:asmbl_1988,status:12], valid-1 NODE_1563_length_10464_cov_44.3116 . gene 1462 6985 . + . ID=g9782;Name=g9782.t1 NODE_1563_length_10464_cov_44.3116 . mRNA 1462 6985 . + . ID=g9782.t1;Parent=g9782;Name=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 1462 1522 . + . ID=g9782.t1.exon1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 1462 1522 . + 0 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 1959 2095 . + . ID=g9782.t1.exon2;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 1959 2095 . + 2 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 2246 2390 . + . ID=g9782.t1.exon3;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 2246 2390 . + 0 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 2704 3146 . + . ID=g9782.t1.exon4;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 2704 3146 . + 2 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 3533 4395 . + . ID=g9782.t1.exon5;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 3533 4395 . + 0 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 4540 5398 . + . ID=g9782.t1.exon6;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 4540 5398 . + 1 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 5541 6234 . + . ID=g9782.t1.exon7;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 5541 6234 . + 0 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 6406 6569 . + . ID=g9782.t1.exon8;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 6406 6569 . + 2 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . exon 6764 6985 . + . ID=g9782.t1.exon9;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . CDS 6764 6850 . + 0 ID=cds.g9782.t1;Parent=g9782.t1 NODE_1563_length_10464_cov_44.3116 . three_prime_UTR 6851 6985 . + . ID=g9782.t1.utr3p1;Parent=g9782.t1 #PROT g9782.t1 g9782 MLSRRTLCITVLAACVSLTFGCTSFTSFSTCVGARDPDTSIFCAWCLPARGGIATCTLELNSTTVQAARCAGGYVGYTMKGSDGRSYNKSTSHDRMTAVGSELSFVNISLALRPGEKSDTFTVTLTPNPCKGVDLYYLMDVTGSMRDDQSSLKALAPDLAKTAQSLCAASTCTAAQKVGCGRIGFGTFIDKPVGPIGYWAAAQPANKVEYGDVPGLPLAPSQRSSTPFNYVFKNVFALDDASEVSTGAKLANFTSTIGNPNLIAENIDYPEAALEALVQAAVCDTEVGWRASNSVRRLIFLATDADPHIAGDGLKAGIFKPNDLTCSLRGTTEVGAGNKAIDRDYPSLGQVADVLIGRNIFPIFASPRNKVPGSQFEREAPNEIVYPSILSVLSFGSNVTLTASSDNAIDAIRQGYDQILNGVSIRVSADDVDFTITPDNAKLQWNQPTTYTITATLRSNAQRGPLRSTVATPVGFEGFGINLITQLEYEECTRSNLPNFFDMTCQNGGAVSCGRCICPSGFDGDYCECSTDRSNCLENGLECSNKGTCKCNKCICKDTEQVLVNNVFRTTSYTGERCNCTHFDCPEANGIQCSGFKCGCEGQCECPNGRTGPACECSGKSTCTTDAECVNGKCQTGIACPSFKNCECAFGYKLSANNTCTVKVYSCPFGLNGLACSGNGVDDCKTTGNCTCKGSYRTEDISDPCACNSDPNACPNKCSGHGTCNCGECQCDTNFVSYTEDPSTYDCRCSNTPCPDDCSGHGSCDCGECKCSGNYTGADCAKYCPNKYLSVGKKITKDDLGCKEDFDSECGVCVCVQNDGPTCSCSKKECPTENAKECSGHGSCKCGVCQCDAGWVGPSCGCDQSLKCPVDINGTECGGPSNGRCVMGEYDAFFQLQCGVCECAVGNRSIPLFSGASCNCSTSECTRSDEEGRPECGSQGECRCGKCVCNPGFQLDNNGVCPQRCDGSKTCPKTNGVVCNGHGTCECGACNCDSKWDGLGCEVCKDISCYDCAPYSLCSDCAQQNNFCKFCATEDANTGAIVSSKCIKANDNSTQCSVTYKDYTDCQVGSSSGGISATTKIGVGAGVGAGLACAGVAGIVGFKLVQRHLDKKEWERFEKERQRSEWKSDQNPLYQSSIRETENPLYIGRE* # PASA_UPDATE: g5907.t1, single gene model update, valid-1, status:[pasa:asmbl_978,status:12], valid-1 NODE_1257_length_12668_cov_42.2924 . gene 145 2314 . - . ID=g5907;Name=g5907.t1 NODE_1257_length_12668_cov_42.2924 . mRNA 145 2314 . - . ID=g5907.t1;Parent=g5907;Name=g5907.t1 NODE_1257_length_12668_cov_42.2924 . five_prime_UTR 2187 2314 . - . ID=g5907.t1.utr5p1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 2181 2314 . - . ID=g5907.t1.exon1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 2181 2186 . - 0 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 1941 2011 . - . ID=g5907.t1.exon2;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 1941 2011 . - 0 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 1719 1799 . - . ID=g5907.t1.exon3;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 1719 1799 . - 1 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 1462 1556 . - . ID=g5907.t1.exon4;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 1462 1556 . - 1 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 755 945 . - . ID=g5907.t1.exon5;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 755 945 . - 2 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 479 548 . - . ID=g5907.t1.exon6;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 479 548 . - 0 ID=cds.g5907.t1;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . exon 145 332 . - . ID=g5907.t1.exon7;Parent=g5907.t1 NODE_1257_length_12668_cov_42.2924 . CDS 145 332 . - 2 ID=cds.g5907.t1;Parent=g5907.t1;3_prime_partial=true #PROT g5907.t1 g5907 MTSYDEYAHDDESLGGYSSSFANDLQYTEEYGDAGAVNGSESKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTSKIVKSDISNSSFVQFQVWDFPGQIDFFDPTFDSDNIFSGCGALVFVIDAQDDYMEALSKLFMTVTKAHKVNKNITFEVFIHKVDGLSDDHKIETQRDIHQRASDELADANLSNIHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS # ORIGINAL: g5909.t1 original gene structure, not modified by PASA NODE_1257_length_12668_cov_42.2924 AUGUSTUS gene 6665 12264 . - . ID=g5909;Name=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS mRNA 6665 12264 . - . ID=g5909.t1;Parent=g5909;Name=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 12127 12264 . - . ID=g5909.t1.exon1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 12127 12264 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 11803 11871 . - . ID=g5909.t1.exon2;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 11803 11871 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 11193 11339 . - . ID=g5909.t1.exon3;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 11193 11339 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 10414 10930 . - . ID=g5909.t1.exon4;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 10414 10930 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 10220 10269 . - . ID=g5909.t1.exon5;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 10220 10269 . - 2 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 10022 10108 . - . ID=g5909.t1.exon6;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 10022 10108 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 9696 9805 . - . ID=g5909.t1.exon7;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 9696 9805 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 9287 9481 . - . ID=g5909.t1.exon8;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 9287 9481 . - 1 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 9044 9203 . - . ID=g5909.t1.exon9;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 9044 9203 . - 1 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 8654 8790 . - . ID=g5909.t1.exon10;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 8654 8790 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 8275 8504 . - . ID=g5909.t1.exon11;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 8275 8504 . - 1 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 8041 8102 . - . ID=g5909.t1.exon12;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 8041 8102 . - 2 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 7512 7679 . - . ID=g5909.t1.exon13;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 7512 7679 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 7144 7290 . - . ID=g5909.t1.exon14;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 7144 7290 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 6940 7023 . - . ID=g5909.t1.exon15;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 6940 7023 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 6665 6802 . - . ID=g5909.t1.exon16;Parent=g5909.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 6665 6802 . - 0 ID=cds.g5909.t1;Parent=g5909.t1 #PROT g5909.t1 g5909 MHTVASASGHCTVGSPTYLEWDGLSVYLESAMDAIDRTLADSDGASSSTAELRNGVGLILDAILARNLVVFSAVTLLLPGEQPPSVTPLQISEDSLAARRKAVTTLVRVAQTASSALLSMPLSFLSVQPFFDEIFTRIEALLRDCLVTDNERTFLFESLVYVGWVMPHWVSLRFGFIAPLAAVCAYFVLMSLYGSHPRHITHICNSTVAHILRLHCIPPLAVTWHAGLPFATNGNRACSNAVKTHDRQAQLVAMLLAPLEATWSSGTFASAAQSPAALAAFLGIAQTAGGDSANNVSTGATSVQRAKRHFILPQMLALVNSILVVFKRCTVPTDSQELASGGYMAATPEGPTPRHPCGPHASAVLPTLLALIRTIHTLYTPAGASLIAPKMRPVLHMSDSERATLMGRPHTPGGALQGGRKGEINAVRQWLSGTRDACYGILACALASDPALFASGEIVSYLSASVFHALGEQQTRHLRSLMHIHPSHLWKFVSSCPISKFSTVDAALAPVLLAIGGRLSAEWDAVAARLVQQGRAGNAPKDDDTDDDDSAESAEVIGERMLRDATRECADFLEHVFPRTALMKLSSSAAAARERSHRSASASSRHGSEAGTPEPLSAVEEAAIARCKHILGTSALGPPLLSMALWLVLQGDSQACARGLLLWQRLLSALVGYPSFHSLLARDVVSACVQAVRLHGQHKDTLGEIITTLNMVYGATCRLSDTATRALQAAAGVPDAAVSSFSAAYASENVERKQKELLRQLLRGVTGVNVGELGRTGATILSLPERLFIDRKPPQPSIDDIEPFDFGLGAIM* # ORIGINAL: g5908.t1 original gene structure, not modified by PASA NODE_1257_length_12668_cov_42.2924 AUGUSTUS gene 2667 6171 . + . ID=g5908;Name=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS mRNA 2667 6171 . + . ID=g5908.t1;Parent=g5908;Name=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 2667 2755 . + . ID=g5908.t1.exon1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 2667 2755 . + 0 ID=cds.g5908.t1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 2890 3061 . + . ID=g5908.t1.exon2;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 2890 3061 . + 1 ID=cds.g5908.t1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 3181 3546 . + . ID=g5908.t1.exon3;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 3181 3546 . + 0 ID=cds.g5908.t1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 4350 4550 . + . ID=g5908.t1.exon4;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 4350 4550 . + 0 ID=cds.g5908.t1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 4686 5265 . + . ID=g5908.t1.exon5;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 4686 5265 . + 0 ID=cds.g5908.t1;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS exon 5372 6171 . + . ID=g5908.t1.exon6;Parent=g5908.t1 NODE_1257_length_12668_cov_42.2924 AUGUSTUS CDS 5372 6171 . + 2 ID=cds.g5908.t1;Parent=g5908.t1 #PROT g5908.t1 g5908 MALRPQVLSLYRALLRAARRLPTKPRAKLAENIRDVFSFRRSEKDSAAIARLVAEGWRVHNALVLISTAPPSVLDNFAAARQAPDLTHRAISLDLFEMKRGTGRPLVARDADPRGAAAGADGDVPVQMLRHARQSGALNISNRNLAVIPRSVWTLALEPPQPPAAVSLAGSDDRWWEVTDLTKLIVAGNRIAEIPEDGPPCLPLLVVFDARDNALRSIPRSFGQLERLSVLHFERNAIADVPPELFTLPNLTVLHLDNNVLVRIPEFDACHRIEELHLTHNKLESLPSSIGRLRSLRKLCLGNNLLASLPPTFGLLKSLAELELNDNRLAGPLPIEIGLMASLQRLDCRHNRISEAPVFVRGKNALREMYLGYNAIMTLEGRIGALSHLSALDVRDNRLQTLPMEVSELRELKRLDLTNNDISDLPAELGLLSGLNALILDGNPLRKLRRDIVQKGTVAVIQYLKSKLEAPPEHLASASDGPAARADYHQQSSSVGGAVRSGSAASAPVSVVSGGHVGGVAMDISVETKGTGVRRAVQYVGKGATDLPPPVVEALPTAAKVDLSKNAIALWPPALIAAPFASITELSLAHNRIASVPPLAFRALPSLVRLDLGHNAVTDLPQSIAECPALSEIYLPFNRLRAIPPALYTLAALATIVASNNQLDSIDGDALAGMSVLSLLDVSNNNISTVPPSLGLCRSMRALSIEGNPFKVPRPQIVQKGTVAIMEYLRDRIPR* # ORIGINAL: g2970.t1 original gene structure, not modified by PASA NODE_5227_length_961_cov_50.1456_potentialcontaminant AUGUSTUS gene 2 928 . + . ID=g2970;Name=g2970.t1 NODE_5227_length_961_cov_50.1456_potentialcontaminant AUGUSTUS mRNA 2 928 . + . ID=g2970.t1;Parent=g2970;Name=g2970.t1 NODE_5227_length_961_cov_50.1456_potentialcontaminant AUGUSTUS exon 2 928 . + . ID=g2970.t1.exon1;Parent=g2970.t1 NODE_5227_length_961_cov_50.1456_potentialcontaminant AUGUSTUS CDS 2 928 . + 0 ID=cds.g2970.t1;Parent=g2970.t1 #PROT g2970.t1 g2970 DEPALNIHGVRLDRARAASAPVVFSSKKLPISGDEFASVDAITSLFGNASASVSTPAATLVFKLSTNPARRASDDIGGGPPAFTSPQLSGDALPNFSVFIQDSYGLAAFAPPTVPLAIRLTIKGNGTTTCTISGDLTRTFSRSSRVDYSNVRVSSSTVPANCTIGVVPDNFLYSEGADLFKNTALQTVQLTSCSAGTSLQPDAAGLYSCVSLPVGAPTAAAASSTSTTLIVAVVVSVVVVCAGVFVVAFAVVRRNRRKWNMKQLEDFARHMESVQPDLAKLELPRDSVELQEVLGEGAFGVVHKAQVS* # ORIGINAL: g3801.t1 original gene structure, not modified by PASA NODE_313_length_27226_cov_42.0165 AUGUSTUS gene 23889 27100 . + . ID=g3801;Name=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS mRNA 23889 27100 . + . ID=g3801.t1;Parent=g3801;Name=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 23889 23977 . + . ID=g3801.t1.exon1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 23889 23977 . + 0 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 24141 24192 . + . ID=g3801.t1.exon2;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 24141 24192 . + 1 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 24343 24414 . + . ID=g3801.t1.exon3;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 24343 24414 . + 0 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 24567 24685 . + . ID=g3801.t1.exon4;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 24567 24685 . + 0 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 24843 25238 . + . ID=g3801.t1.exon5;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 24843 25238 . + 1 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 25468 25588 . + . ID=g3801.t1.exon6;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 25468 25588 . + 1 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 25774 25958 . + . ID=g3801.t1.exon7;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 25774 25958 . + 0 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 26225 26361 . + . ID=g3801.t1.exon8;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 26225 26361 . + 1 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 26554 26722 . + . ID=g3801.t1.exon9;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 26554 26722 . + 2 ID=cds.g3801.t1;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 26915 27100 . + . ID=g3801.t1.exon10;Parent=g3801.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 26915 27100 . + 1 ID=cds.g3801.t1;Parent=g3801.t1 #PROT g3801.t1 g3801 MAAQHVQGAPPAQAPKYFTDNKRGEVQELKALFRHADVQRDVKLQREVVQKVIAYMTSGVDVSRLFSDMIMASATKDPVQKKLIYLYLSTYAESNSELALLAINTLQKDCRDDNPLIRGLALRSMCGLRLPAMIEYVVDPLASGMADKNPYVRRMAAMGVLKVFQLLPEVVLDVGGRKFVERLWMLVRDRDGQVALDALCALDEILAGDGGVLVDRALAVSLLTRLKDFGEFGVCKALELIERYDPSTEDEAYDILNILEERLKHSNAAVVLAAAKIFLKIARHLPHISADIYDRLKLPLLTVSTTQSAELNHGCLHHLAILIELRPGILDAEHKHFFVRYNDPTYIKSIKVDILVSIASERNASEIVDELAAYVTDVDAELARQSVLAIGKIALRVSACSGMCTLRLLEFLSLDSPHITSTTVVVLADILRHHRSSAVDVLPELTKHFSIVDEPDAKVAMIWLAGEFGESVAQAPYLLESLADTIADEGSAEVKLQLLTAAMRLFFK # PASA_UPDATE: g3793.t1, single gene model update, valid-1, status:[pasa:asmbl_5617,status:3], valid-1 NODE_313_length_27226_cov_42.0165 . gene 2674 4066 . + . ID=g3793;Name=g3793.t1 NODE_313_length_27226_cov_42.0165 . mRNA 2674 4066 . + . ID=g3793.t1;Parent=g3793;Name=g3793.t1 NODE_313_length_27226_cov_42.0165 . five_prime_UTR 2674 2732 . + . ID=g3793.t1.utr5p1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . exon 2674 2933 . + . ID=g3793.t1.exon1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . CDS 2733 2933 . + 0 ID=cds.g3793.t1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . exon 3087 3230 . + . ID=g3793.t1.exon2;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . CDS 3087 3230 . + 0 ID=cds.g3793.t1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . exon 3406 3453 . + . ID=g3793.t1.exon3;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . CDS 3406 3453 . + 0 ID=cds.g3793.t1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . exon 3678 3724 . + . ID=g3793.t1.exon4;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . CDS 3678 3724 . + 0 ID=cds.g3793.t1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . exon 3893 4066 . + . ID=g3793.t1.exon5;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . CDS 3893 4046 . + 1 ID=cds.g3793.t1;Parent=g3793.t1 NODE_313_length_27226_cov_42.0165 . three_prime_UTR 4047 4066 . + . ID=g3793.t1.utr3p1;Parent=g3793.t1 #PROT g3793.t1 g3793 MFNYRLDTLAYAKIALHAYRCPHLAVNGVLLAKRDSAKDGALAITDAVPLFHGVLNLNAMLEVALQQVDLYAERQDMQIVGYYVIHETDDAGVDAASSKIADTIAENYGKACLLLVKNASIAVTSQKPAFDTYIKTDGRWKVSGDASTSCENGAHDALKTLVLKRTPIASLVDFDDHLDNVARDWTNAWIAKEIRHN* # ORIGINAL: g3797.t1 original gene structure, not modified by PASA NODE_313_length_27226_cov_42.0165 AUGUSTUS gene 13226 15533 . + . ID=g3797;Name=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS mRNA 13226 15533 . + . ID=g3797.t1;Parent=g3797;Name=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 13226 13294 . + . ID=g3797.t1.exon1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 13226 13294 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 13375 13932 . + . ID=g3797.t1.exon2;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 13375 13932 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 14142 14181 . + . ID=g3797.t1.exon3;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 14142 14181 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 14402 14520 . + . ID=g3797.t1.exon4;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 14402 14520 . + 2 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 14764 14874 . + . ID=g3797.t1.exon5;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 14764 14874 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 15122 15253 . + . ID=g3797.t1.exon6;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 15122 15253 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 15450 15533 . + . ID=g3797.t1.exon7;Parent=g3797.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 15450 15533 . + 0 ID=cds.g3797.t1;Parent=g3797.t1 #PROT g3797.t1 g3797 MALAARPYSIVDGVTRYNSHVYAESLLRSRQAECASVFAQAYSQDGFFLAAARSDGRVCVWNIVALLEEGESGVDSRAPCTSFLIESTETAIYTLTTAYVDGHSLLFAGTSRGVLAYQWHAIIERARHVRFDGFLEPAVTLSTPTATQGGLQGTEVNAIVCDAASGRLYAAGGENVVQQWDIRTGHLTASYVGHKDYVHCLAQRFSRGQIVSGSEDGTVRFWDTRTGTCARSLSPALAINPSAKKATHYVSCVAVDSNGDWLACGGGFPVAVVHADSGSVVASSPRCVGTRDLCFHDNMILAGGGDRLVRKLDMDATVRGEIATSSAVVYSIKPNVNAATHAQVVTVAGTSNTVDVYLNLSYRSLTLLMS* # ORIGINAL: g3795.t1 original gene structure, not modified by PASA NODE_313_length_27226_cov_42.0165 AUGUSTUS gene 6092 9896 . - . ID=g3795;Name=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS mRNA 6092 9896 . - . ID=g3795.t1;Parent=g3795;Name=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 9160 9896 . - . ID=g3795.t1.exon1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 9160 9896 . - 0 ID=cds.g3795.t1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 8349 8895 . - . ID=g3795.t1.exon2;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 8349 8895 . - 1 ID=cds.g3795.t1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 8116 8217 . - . ID=g3795.t1.exon3;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 8116 8217 . - 0 ID=cds.g3795.t1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 7531 7757 . - . ID=g3795.t1.exon4;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 7531 7757 . - 0 ID=cds.g3795.t1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 7180 7365 . - . ID=g3795.t1.exon5;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 7180 7365 . - 1 ID=cds.g3795.t1;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 6092 6992 . - . ID=g3795.t1.exon6;Parent=g3795.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 6092 6992 . - 1 ID=cds.g3795.t1;Parent=g3795.t1 #PROT g3795.t1 g3795 MFRNREPLRIDTGAVSSTQTPPMSPRIVVEDTAPDRLHNVEFDCNVSGDFVADLAQAMSKIKGRDNDLLSMLESLGQSTTDLSLKPLIRGGFGGSTGALSSSANDGDVAEMPIRGGRGSRRNQADRQFERRDVYARNVSESSDGPEAPGTPTVPRMERSNSSPACLSPIKDLPESSPVTSPTSRVLGHSAGSAGLQGLAAAAQQTPIRRNNASKINGSPFGTPAQTPMSPRMSRTGTIGKHESLTSGAAKDSAKRDANGATRTSSLFSRVFSSSRKKKQAAKLEFGKKCIQNDVVRKGWLHRRGRPPMHMWRHRVCVLTSHTFFYFEREASIDAGEWEGFFPTNDIHTVEAVPYDSYKKEFCFKISTTFRDFVFRADSEKELTAWVDTFQTLIGEGTTQQGTPKSRPKLYNVGKYRAGKTIGEGGYSKVKLGTDTSTNQQVAIKMLKKSEIDADMLVRVEREIKFLRLLNHPYIVKLFDVEETDCYIFLVMEYFQGDPLDDYIDKQPEARLAEPMAREIFGKIVSAVQYCHAHYIVHRDLKMENVLASAKGDVRLIDFGLSNSFRSGDAQMRTHCGTFEYAAPEMVSKAKYQGAQCDVWSLGVILFAMVTGRFPFSNESTGPKEIMDNIMKGASGVYFPPIISPSLVDLLKAMLVVAPEERLTLEQVNAHVWMKGFSFIHRSSPVTSAPPSTSVASTLASSVSAASSTAASTTSTSSSGTSVNSARLSNPLPKKNTSLSSDSSAAASTTTNSSSHKRTPSRGTIGTVMRTEASPDTWNPGEVDPFSTPTQVQQQSALSRQTAVVDSSLEAEANVTPIRTLPNRSSSEGAANAGADMGSSSQASSASVRGPGARTQSLGIPDDYSPMSALKSGGGVVGDLGEEIFAEVRKRAVSEGRSDA* # PASA_UPDATE: g3794.t1, single gene model update, valid-1, status:[pasa:asmbl_5615,status:12], valid-1 NODE_313_length_27226_cov_42.0165 . gene 4377 5425 . - . ID=g3794;Name=g3794.t1 NODE_313_length_27226_cov_42.0165 . mRNA 4377 5425 . - . ID=g3794.t1;Parent=g3794;Name=g3794.t1 NODE_313_length_27226_cov_42.0165 . five_prime_UTR 5279 5425 . - . ID=g3794.t1.utr5p1;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . exon 5219 5425 . - . ID=g3794.t1.exon1;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . CDS 5219 5278 . - 0 ID=cds.g3794.t1;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . exon 4881 5004 . - . ID=g3794.t1.exon2;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . CDS 4881 5004 . - 0 ID=cds.g3794.t1;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . exon 4377 4685 . - . ID=g3794.t1.exon3;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . CDS 4591 4685 . - 2 ID=cds.g3794.t1;Parent=g3794.t1 NODE_313_length_27226_cov_42.0165 . three_prime_UTR 4377 4590 . - . ID=g3794.t1.utr3p1;Parent=g3794.t1 #PROT g3794.t1 g3794 MASLTSVLSPAQLKQLRELKIKTRIDNERYLRQHPEVQAMIGSFMREILETRPENVREYAAKYFTNPQLKAHVAASIKRIGTKTQPLAPINA* # PASA_UPDATE: g3792.t1, single gene model update, valid-1, status:[pasa:asmbl_5614,status:12], valid-1 NODE_313_length_27226_cov_42.0165 . gene 42 2140 . - . ID=g3792;Name=g3792.t1 NODE_313_length_27226_cov_42.0165 . mRNA 42 2140 . - . ID=g3792.t1;Parent=g3792;Name=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 2054 2140 . - . ID=g3792.t1.exon1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 2054 2140 . - 0 ID=cds.g3792.t1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 1765 1822 . - . ID=g3792.t1.exon2;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 1765 1822 . - 0 ID=cds.g3792.t1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 1516 1620 . - . ID=g3792.t1.exon3;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 1516 1620 . - 2 ID=cds.g3792.t1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 777 1240 . - . ID=g3792.t1.exon4;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 777 1240 . - 2 ID=cds.g3792.t1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 356 466 . - . ID=g3792.t1.exon5;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 356 466 . - 0 ID=cds.g3792.t1;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . exon 42 165 . - . ID=g3792.t1.exon6;Parent=g3792.t1 NODE_313_length_27226_cov_42.0165 . CDS 42 165 . - 0 ID=cds.g3792.t1;Parent=g3792.t1;3_prime_partial=true #PROT g3792.t1 g3792 MSNRVRVVVRTRPTANFAQDKIRLSPEAKSINIHIDKKDQGFINNQQLDWNFKVDNILHNASQEAIYDDCARSIVVKTLDGFNGTIMAYGQTGAGKTFTMTGATENYKHRGLIPRAIAQIFREVSARPESAITVRISYLEIYNEQFIDLLSTLADPDASGQQLMVTDNADGGTFVKGLTTRIANNEEEALNLLFEGETTRAISEHSLNKQSSRSHCVFTIHIESRSRIESSEKFTVSKLNLVDLAGSERLSKTQSDGTTLREAMYINKSLSFLEQVIIALADRRRDHVPYRQSKLTHVLKDALGGNCDTIMIANIW # ORIGINAL: g3800.t1 original gene structure, not modified by PASA NODE_313_length_27226_cov_42.0165 AUGUSTUS gene 21431 23455 . - . ID=g3800;Name=g3800.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS mRNA 21431 23455 . - . ID=g3800.t1;Parent=g3800;Name=g3800.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 21431 23455 . - . ID=g3800.t1.exon1;Parent=g3800.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 21431 23455 . - 0 ID=cds.g3800.t1;Parent=g3800.t1 #PROT g3800.t1 g3800 MSMMAARGKRGHGGRAHAHPHAGHTSFNRTQFVEAKGSTGTNQGRYGVHGRGRGASRPHAPRGGDDRRGRWHVQDGGAQRARGTRGSYAGAIHSATIRPATQTLLDTHTDASRARKRRSARKKARKSAVTCHARITRGPHRGRRCMSHCAPGRPYCKVHAFVAGNDAQVQCRGVNKRGERCIRTVDARRPFCPSHVGPFERRIVHLLRSVAGQRVDSKRPRDAHTADVDCGIAPVSATNLTATTAAVMSATTAIQSAPSVFGEPSRAPPQCKLTSHPTSGRTALNIVDDPKFRSAFVDHARRSERREKELRREELAAHAAYRRLLKALVASSLSSAADPTMVHVRTHDVHADDTAKDQLRSVHDSGAGADVTHAPRGRMDSLAHDSPLSGSSSPVRDAQQQPASHWGCDAKTPDTHAFIAALHTAGETAAPYDPYSLVESHVTGSLLERTMGFTSFLDGNSARIVKFRQKRKALRNARNARGGPAGGTKIGSAAKDVSKGQDPVADRRPASEISASVSEKSTGDGRRRHASTGAHHDTQLAQCGLRNSAAHNELDEGRKRKRTDVAHRGRDKRRRVDVGEGVSRADMHSVETAAFASILRCDDTSNYDCPRGEVVSVMDALACVVGVTPAATTATTTTTTTATATTAADAAASNAGGPTPATGKISFRIGTMHK* # PASA_UPDATE: g3798.t1, single gene model update, valid-1, status:[pasa:asmbl_5616,status:3], valid-1 NODE_313_length_27226_cov_42.0165 . gene 15687 18352 . - . ID=g3798;Name=g3798.t1 NODE_313_length_27226_cov_42.0165 . mRNA 15687 18352 . - . ID=g3798.t1;Parent=g3798;Name=g3798.t1 NODE_313_length_27226_cov_42.0165 . five_prime_UTR 18294 18352 . - . ID=g3798.t1.utr5p1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . five_prime_UTR 18157 18189 . - . ID=g3798.t1.utr5p2;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 18294 18352 . - . ID=g3798.t1.exon1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 18144 18189 . - . ID=g3798.t1.exon2;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 18144 18156 . - 0 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 17946 18023 . - . ID=g3798.t1.exon3;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 17946 18023 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 17594 17743 . - . ID=g3798.t1.exon4;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 17594 17743 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 17256 17354 . - . ID=g3798.t1.exon5;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 17256 17354 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 16935 17066 . - . ID=g3798.t1.exon6;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 16935 17066 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 16595 16726 . - . ID=g3798.t1.exon7;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 16595 16726 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 16276 16385 . - . ID=g3798.t1.exon8;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 16276 16385 . - 2 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . exon 15687 16108 . - . ID=g3798.t1.exon9;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . CDS 15950 16108 . - 0 ID=cds.g3798.t1;Parent=g3798.t1 NODE_313_length_27226_cov_42.0165 . three_prime_UTR 15687 15949 . - . ID=g3798.t1.utr3p1;Parent=g3798.t1 #PROT g3798.t1 g3798 MASEDVQATLSRRLSNRPEPDELVERGVLKSTHTASALQAAQADLEKHKIADALDAKLHVRPALGDIQEVLKPAEDERPHSHEAELAEAAIRLDKKLAERPEKEELVDRNILKASTVAPSLQHAQEELMKAKIEDHLAHKLESRPTKDDLVEHNIMKDSVVAPTLQAAQDALKKAQIEDSLENKLSNRPEKQDLLAHNILHDTTAAPAIQAAQEALKRAQIQDQLHHDVNRRPPQAELVDHNILKNPGTSPALVAQQEALKRAQVEDSLESKLQHRPTADQLKTQHIISE* # PASA_UPDATE: g3799.t1, single gene model update, valid-1, status:[pasa:asmbl_5618,status:3], valid-1 NODE_313_length_27226_cov_42.0165 . gene 18987 21357 . + . ID=g3799;Name=g3799.t1 NODE_313_length_27226_cov_42.0165 . mRNA 18987 21357 . + . ID=g3799.t1;Parent=g3799;Name=g3799.t1 NODE_313_length_27226_cov_42.0165 . five_prime_UTR 18987 19098 . + . ID=g3799.t1.utr5p1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . exon 18987 19487 . + . ID=g3799.t1.exon1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . CDS 19099 19487 . + 0 ID=cds.g3799.t1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . exon 19645 19831 . + . ID=g3799.t1.exon2;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . CDS 19645 19831 . + 1 ID=cds.g3799.t1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . exon 19945 20079 . + . ID=g3799.t1.exon3;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . CDS 19945 20079 . + 0 ID=cds.g3799.t1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . exon 20271 20329 . + . ID=g3799.t1.exon4;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . CDS 20271 20329 . + 0 ID=cds.g3799.t1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . exon 20489 21357 . + . ID=g3799.t1.exon5;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . CDS 20489 20672 . + 1 ID=cds.g3799.t1;Parent=g3799.t1 NODE_313_length_27226_cov_42.0165 . three_prime_UTR 20673 21357 . + . ID=g3799.t1.utr3p1;Parent=g3799.t1 #PROT g3799.t1 g3799 MSAAVAGGRTVPRPAGFGSTGATRTSTTLPARATGLGSSTAPRTSTTTHVVGMQAATSVGRSRGATVGATRSTSGASSGASRSSSSKGPSASSSASSSAGARSRVASSAPIVASAATATKTVTTDKISSRLNPKSVDFFKGGSSGKKSQFESVYSNGGIPCRLMHGSVKHKIQWDAPPESLAYDTVLIHIAEGLRETIHPYCFLARTGYKELMEAPGAAGKVIPLLPKVVASLRTALVSDNKDVFIAALEALAQTSNTVGGELTPHLKVLLPPLSKQLMDKTNRDRVTDVLNSLEGNGGREALAVIKSKVPTYQALC* # ORIGINAL: g3796.t1 original gene structure, not modified by PASA NODE_313_length_27226_cov_42.0165 AUGUSTUS gene 11325 12413 . - . ID=g3796;Name=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS mRNA 11325 12413 . - . ID=g3796.t1;Parent=g3796;Name=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 12249 12413 . - . ID=g3796.t1.exon1;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 12249 12413 . - 0 ID=cds.g3796.t1;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 11854 12003 . - . ID=g3796.t1.exon2;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 11854 12003 . - 0 ID=cds.g3796.t1;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 11607 11711 . - . ID=g3796.t1.exon3;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 11607 11711 . - 0 ID=cds.g3796.t1;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS exon 11325 11477 . - . ID=g3796.t1.exon4;Parent=g3796.t1 NODE_313_length_27226_cov_42.0165 AUGUSTUS CDS 11325 11477 . - 0 ID=cds.g3796.t1;Parent=g3796.t1 #PROT g3796.t1 g3796 MATQTSTDLPSLLINDHRLVQNLYQQFVSATSPNERKNLAELIIRSLSTHDFLEREYLYPTLYSYDKSMRDKALYDHDEVTKMMYAIEKMDKEKDTQGFAFKMQELMQSVDAHISEEEDSIFPLLRMRCSREQLVQLGEKAESARTRAPTHPHPLTPLSGVGATVMGTVAGMTDKVRDRITGHGSNPLEE* # PASA_UPDATE: g6010.t1, single gene model update, valid-1, status:[pasa:asmbl_4173,status:12], valid-1 NODE_2377_length_6498_cov_40.1825 . gene 5309 6091 . - . ID=g6010;Name=g6010.t1 NODE_2377_length_6498_cov_40.1825 . mRNA 5309 6091 . - . ID=g6010.t1;Parent=g6010;Name=g6010.t1 NODE_2377_length_6498_cov_40.1825 . exon 5976 6091 . - . ID=g6010.t1.exon1;Parent=g6010.t1 NODE_2377_length_6498_cov_40.1825 . CDS 5976 6091 . - 0 ID=cds.g6010.t1;Parent=g6010.t1;5_prime_partial=true NODE_2377_length_6498_cov_40.1825 . exon 5309 5670 . - . ID=g6010.t1.exon2;Parent=g6010.t1 NODE_2377_length_6498_cov_40.1825 . CDS 5580 5670 . - 1 ID=cds.g6010.t1;Parent=g6010.t1 NODE_2377_length_6498_cov_40.1825 . three_prime_UTR 5309 5579 . - . ID=g6010.t1.utr3p1;Parent=g6010.t1 #PROT g6010.t1 g6010 DETHVAHHKALADAELYSMQQLAQGNQLKLTPQYLEFIRYVSVANNTKIFFGPDIPTMFLQSLEQTKN* # ORIGINAL: g6008.t1 original gene structure, not modified by PASA NODE_2377_length_6498_cov_40.1825 AUGUSTUS gene 80 909 . - . ID=g6008;Name=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS mRNA 80 909 . - . ID=g6008.t1;Parent=g6008;Name=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS exon 886 909 . - . ID=g6008.t1.exon1;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS CDS 886 909 . - 0 ID=cds.g6008.t1;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS exon 619 726 . - . ID=g6008.t1.exon2;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS CDS 619 726 . - 0 ID=cds.g6008.t1;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS exon 307 440 . - . ID=g6008.t1.exon3;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS CDS 307 440 . - 0 ID=cds.g6008.t1;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS exon 80 200 . - . ID=g6008.t1.exon4;Parent=g6008.t1 NODE_2377_length_6498_cov_40.1825 AUGUSTUS CDS 80 200 . - 1 ID=cds.g6008.t1;Parent=g6008.t1 #PROT g6008.t1 g6008 MDPESPINGKIKVTPTLVLATAASVLGSTFQFGYNLAVIDNPKLAVQDYFTSRGKEFNDFQWSVIVSIFCAGGLFGGLYAGEFANKFGRKNALLANNVFILIGAGLMCFANNWGMIAAGRFFVGIGSGE # PASA_UPDATE: g6009.t1, single gene model update, valid-1, status:[pasa:asmbl_4174,status:3], valid-1 NODE_2377_length_6498_cov_40.1825 . gene 1660 4419 . + . ID=g6009;Name=g6009.t1 NODE_2377_length_6498_cov_40.1825 . mRNA 1660 4419 . + . ID=g6009.t1;Parent=g6009;Name=g6009.t1 NODE_2377_length_6498_cov_40.1825 . five_prime_UTR 1660 1735 . + . ID=g6009.t1.utr5p1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . exon 1660 2396 . + . ID=g6009.t1.exon1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . CDS 1736 2396 . + 0 ID=cds.g6009.t1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . exon 2587 3391 . + . ID=g6009.t1.exon2;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . CDS 2587 3391 . + 2 ID=cds.g6009.t1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . exon 3586 3942 . + . ID=g6009.t1.exon3;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . CDS 3586 3942 . + 1 ID=cds.g6009.t1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . exon 4167 4419 . + . ID=g6009.t1.exon4;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . CDS 4167 4377 . + 1 ID=cds.g6009.t1;Parent=g6009.t1 NODE_2377_length_6498_cov_40.1825 . three_prime_UTR 4378 4419 . + . ID=g6009.t1.utr3p1;Parent=g6009.t1 #PROT g6009.t1 g6009 MAGHLRVAALLAVVLALGLSPCAAADDTDWVQEFLKLPDAQRARAHLQYYTSISHVAGTQGDYATAKYTLAEFKSYGLKARIEPVDVLLSYPLTSSVEVVDPPEHRYVAKLSEDVFSEDPLTDNDLRNHTFNGYGPSGDATGPLVYLNYGGYEDFEHAIKEGVNLTGAVGIVRYGAVFRGLKAKYAQEHGMVALIIYSDPLDDGAVKGKTYPEGPWRPASGIQRGSVQFNMLCAGDPGLVSRDPDVCGGLETDDLIPSIPVQPMAYGDAQKLLEGIKGRPSPTSWHGGIDGVTYDIGPGPAVVRVNVANNFTVGPIWNVIAEIAGSDVEADAVVLGNHRDAWVYGAVDPNSGTAALLEVARGLGALVSAGWRPRRSIILASWDGEEYGLLGSTAYAEENAHDLRSHAVAYLNVDVGVSGSNFGASGTPNLAGVLHDVLGLVANPATGKPLSDDWSGKLGALGSGSDYTAYLDHLGISSLDFSFSGDYGVYHSVYDSFHWMESFGDPTFEYHRAAAQVWGALAVRIADDVVLPLNISTYADALAVYIDDLKSTSPPSSVNVSAIEEAVVEFKSAASTLMAHAASARQEPSLLSPEEMYELNKQLSLAERSFISQAGLPNRTYFKHVVYAPDSRNGYSSSVFPGLVDAIRSGDEGTILSQLRVLVSCIRAATAMATRKH* # ORIGINAL: g993.t1 original gene structure, not modified by PASA NODE_888_length_16235_cov_40.3111 AUGUSTUS gene 951 1610 . + . ID=g993;Name=g993.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS mRNA 951 1610 . + . ID=g993.t1;Parent=g993;Name=g993.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS exon 951 1272 . + . ID=g993.t1.exon1;Parent=g993.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS CDS 951 1272 . + 0 ID=cds.g993.t1;Parent=g993.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS exon 1426 1610 . + . ID=g993.t1.exon2;Parent=g993.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS CDS 1426 1610 . + 2 ID=cds.g993.t1;Parent=g993.t1 #PROT g993.t1 g993 MLNPSSLGSPFNIVQQQMYGSQQQQQQHHHHQQQQHQYLQHQHMQQQQNARQQRQQTQQHSRAPVDASAAGAPVTASVPQGPSMPFGSIFSKPPPLVVHQPRIPAAKDVDIAALGLHAGLGDMYTNVSTVTRAAAASSTPTPAQPPQPTGPSALDTLRMGYSDSDDNA* # PASA_UPDATE: g997.t1, single gene model update, valid-1, status:[pasa:asmbl_9834,status:12], valid-1 NODE_888_length_16235_cov_40.3111 . gene 10015 16051 . + . ID=g997;Name=g997.t1 NODE_888_length_16235_cov_40.3111 . mRNA 10015 16051 . + . ID=g997.t1;Parent=g997;Name=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 10015 10068 . + . ID=g997.t1.exon1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 10015 10068 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 10209 10332 . + . ID=g997.t1.exon2;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 10209 10332 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 10557 11422 . + . ID=g997.t1.exon3;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 10557 11422 . + 2 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 11595 11927 . + . ID=g997.t1.exon4;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 11595 11927 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 12196 12639 . + . ID=g997.t1.exon5;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 12196 12639 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 12817 13025 . + . ID=g997.t1.exon6;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 12817 13025 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 13196 13297 . + . ID=g997.t1.exon7;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 13196 13297 . + 1 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 13609 13879 . + . ID=g997.t1.exon8;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 13609 13879 . + 1 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 14087 14450 . + . ID=g997.t1.exon9;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 14087 14450 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 14749 14882 . + . ID=g997.t1.exon10;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 14749 14882 . + 2 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 15151 15276 . + . ID=g997.t1.exon11;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 15151 15276 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 15515 15572 . + . ID=g997.t1.exon12;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 15515 15572 . + 0 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 15773 15896 . + . ID=g997.t1.exon13;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 15773 15896 . + 2 ID=cds.g997.t1;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . exon 16048 16051 . + . ID=g997.t1.exon14;Parent=g997.t1 NODE_888_length_16235_cov_40.3111 . CDS 16048 16051 . + 1 ID=cds.g997.t1;Parent=g997.t1 #PROT g997.t1 g997 MPVEQLHMSRMGSDNGKKNRNSNPTEEDEVPLILNVAADSDSEDDDPSFSRRTRRRVKSSRWSWRGGIGTWKAGLRIWLSEIKSRFHRKHEPKPRTIGVGSSDATDSDFPPNVIRNQKYNLMSFLPIVLFEQFKFFFNLYFLLVAMSQFVPALRIGYLYTYWGPLIFVLAVTITKELYDDWHRYRRDMEVNSQTYTRLTSGGPVDVPSASLRVGDVVIVRTNQRVPADLILLRTTEKNGSCFVRTDQLDGETDWKLRLAVPSCQRLSCDGELFELGADVYAEKPHRDIYAFVGTFSMPTDGGITRSVESLGVDNALWANTVVASGQATGVVIYTGADTRSAMNTSHPQTKIGLIDWEINRLAKVLVGVTFSLAAVLVVLQGLHGAWYTQLFRFVLLFSYIIPISLRVNLDMGKTVYSWLIMRDKEIEGTVVRTSTIPEELGRIEYVLTDKTGTLTQNDMVFKRVHLGQVSFGKDSMDEVKSHVRDAFQDPAAVALFDQNNAREAQHFAGARDSAVGGGVSRDAGGGGGVAASAYSRSSSTENWGMSAVRAGKQPARKMQKSLQERVRDMVVAVALCHNVTPVTEEDGTMSYQASSPDEVALVKWTAEVGVRLMRRDMNSLTLAVAGGTVTYEVLNIFPFTSETKRMGIILRDTSGEITFFCKGADVVMGKIVQFSDWLEEECGNMAREGLRTLVVAKKGLTATQYKDFSDRYRDAKASINDRASQVQMAVESLERDLELLGLTGVEDLLQEGVKPTLELLRNAGIRVWMLTGDKMETATCIAVSSRLVSRTQAIHTFQKVQDRDETQQELNAFRRKTDCALVIDGASLEAVLSHHAAEFAELACAAPAVVCCRCSPTQKAEVVRLIRRHVGRRCAAVGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSVLQFRYIGRLLLWHGRNSYKRSAALSQFVIHRGLIISIIQAMFSAIFYFMAIALYQGIIMVGYATLYTMAPVFSLVMDRDVSDDIAMTYPELYKELVKGRSLSFKTFFVWVLISVYQGGVIMLGSVLLFDAQLTHIVAITFTALVLTEYLMVALSIHTC* # PASA_UPDATE: g996.t1, single gene model update, valid-1, status:[pasa:asmbl_9836,status:3], valid-1 NODE_888_length_16235_cov_40.3111 . gene 7129 9467 . - . ID=g996;Name=g996.t1 NODE_888_length_16235_cov_40.3111 . mRNA 7129 9467 . - . ID=g996.t1;Parent=g996;Name=g996.t1 NODE_888_length_16235_cov_40.3111 . five_prime_UTR 9343 9467 . - . ID=g996.t1.utr5p1;Parent=g996.t1 NODE_888_length_16235_cov_40.3111 . exon 8651 9467 . - . ID=g996.t1.exon1;Parent=g996.t1 NODE_888_length_16235_cov_40.3111 . CDS 8651 9342 . - 0 ID=cds.g996.t1;Parent=g996.t1 NODE_888_length_16235_cov_40.3111 . exon 7129 8389 . - . ID=g996.t1.exon2;Parent=g996.t1 NODE_888_length_16235_cov_40.3111 . CDS 7696 8389 . - 1 ID=cds.g996.t1;Parent=g996.t1 NODE_888_length_16235_cov_40.3111 . three_prime_UTR 7129 7695 . - . ID=g996.t1.utr3p1;Parent=g996.t1 #PROT g996.t1 g996 MRVCGSMPCNLTDRLLSKRRPLTVAVAVVCVSLVAIAGLWIASLRFGHNGASTAKKAFRFAIVEASDPATALPGVFLSKGMMRSHLRDMANFHAINDSIFSVVLKPAHLIPRGASAHDYVSYAKYFWPDPANTSDSAPWIRIDGRVNPIVDLVTDFKYFRAMTEAVRVLSLGYYFLGDESLAAKACARITEWFIAPATRMTPHVMFAAMRINDPSGIGSPPGILDLRPLTRIFTSVTLLNSSRHYTLEMDDALKAWAGEYITWLDTSPNGQSEKVAPNNHAVYFDTQYVALLRFLGRTVEAREYAFTSGRNHIQRQINPNGTQPHELSRTLTWYYSCFNLQAFFSLSQEAASVGVNLYTYTAKRGQALKAAVDYLLPYAVARGKDWPYDNSASGFEVRDFLGVLQLGYLLWRDPAYVGPVQLLRERVEAEEGGYTKMELIDEWVCANTLDTSVAIYSCRLV* # ORIGINAL: g994.t1 original gene structure, not modified by PASA NODE_888_length_16235_cov_40.3111 AUGUSTUS gene 2129 3682 . - . ID=g994;Name=g994.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS mRNA 2129 3682 . - . ID=g994.t1;Parent=g994;Name=g994.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS exon 2129 3682 . - . ID=g994.t1.exon1;Parent=g994.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS CDS 2129 3682 . - 0 ID=cds.g994.t1;Parent=g994.t1 #PROT g994.t1 g994 MELESVPVEVFIWHILPHLADADIVSLSRTSSTLRECTWPRRMFTLRRKYSHDFATIAAFRRRVCEVLPKDRLAVDLTGANVDNVKGLAGVHTLSLSSCWNMKDASPLGGIHTLDLSHCDNLVDVSALGGVHSLNLASCVCVSNVSSLGKVHTLNLSNCWAIRDVSALGNVHSLNLRRCHDVYDVSELRNVRILDLSSTLISDVSNLGRAHTLDLSRCGRLQNVSSLGGVHTLNLSQCEQVTDVSALGGVHSLNISWCTRVVHVSALGNVHTLNMSGCKSAIGINSLGDVHTLDLSWCGHVDDVSALHNVRNLNLSNCNDLTDVSALGGVHTLNLSSCSNISEVSALSKVHSLNLVCCRSITNVSALGNVSELFLSQCPGIVDVSALGNVHTLHLSSCTGITDVSCLGRVHCLTLSHCHGVGDVSALGGVHTLDISHCHNVSDVSALGGVDTLNLSSCTNIKDVSALGGVRNLNLSGCDKIHDVSALNGVHTLDLRRCERASDVLLLTGVRKLIING* # ORIGINAL: g995.t1 original gene structure, not modified by PASA NODE_888_length_16235_cov_40.3111 AUGUSTUS gene 4345 6963 . + . ID=g995;Name=g995.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS mRNA 4345 6963 . + . ID=g995.t1;Parent=g995;Name=g995.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS exon 4345 6963 . + . ID=g995.t1.exon1;Parent=g995.t1 NODE_888_length_16235_cov_40.3111 AUGUSTUS CDS 4345 6963 . + 0 ID=cds.g995.t1;Parent=g995.t1 #PROT g995.t1 g995 MILLPYTPCGLLYILRPPNVPPVYAPVPLRSVLVEGKVVDMVAEIKVIQEYENRESLPIEATYVFPLDEKSAVFEFTAEVDGRIVNGVVRPKEIARAEYEHAVKQGQSAYLLEESRADVFEVSVGNLQPGKTAKISISYVTELALETDRIKFVLPTAVAPRYSPAGEADPIPSITYACGKTPYALKLDLLIEMPLGITAVTSPTHAIANKPVSACIWEALLMLTTTSMDRDVVVLVATPSAHEHRAVFESDGNDTAAMVTLVPRFVLDDVKTEIIFVIDRSGSMQGSQITQAANALRIFMRSLPPDSYFNVVGFGSSHQFLFKESVKYDNKSMAKATTHAQSLQADLGGTELLDPMQAILRRPQIKGYPRQVFVLTDGQISNTDQVIGLVTKHSDTTRVFALGIGHSVSRHLVEGLARAGKGTAQFVVDGESMEAKVMRQLKHAIQPALSDVRIDWGESTAPPPAAPATVPAEATQEPPKRSLLGYHKPSVPTASIAPPPTWSMQAPFTLPPVFDGERFIAYCIFRGVRSAPATVKVVANSPDGPLEAELKVGEDNCFEGNTVHRLAARALIRDLEEDRSYMHKAPGVLTPISQSVDAEVERLALKYSLTSRRTAFVAVDPMRPTEHSLYHCHYGPLQRPVPVARNTMSRRSCSRSRSPTVAVVQQGTLCRGGERDRGYRGGRGGGAMRGFSSFSSLAAASRPAADAAMPEMGKKCKRMSPDFERDDMDIDRRCDDDDSEGKVKEFSAHVSRVGSAPSAPKSAGMSSSAAAANAFSRVVSAQTFDGSFDESLVASIGASNPTFSAAFATSGATSREQWLTAVAVAYMEMRLASRNDEWELMANKATKWLRARSGCPDPDATLAAARAFVATL* # ORIGINAL: g12959.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 39398 43030 . + . ID=g12959;Name=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 39398 43030 . + . ID=g12959.t1;Parent=g12959;Name=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 39398 41153 . + . ID=g12959.t1.exon1;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 39398 41153 . + 0 ID=cds.g12959.t1;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 41586 41667 . + . ID=g12959.t1.exon2;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 41586 41667 . + 2 ID=cds.g12959.t1;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 41956 42075 . + . ID=g12959.t1.exon3;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 41956 42075 . + 1 ID=cds.g12959.t1;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 42319 42502 . + . ID=g12959.t1.exon4;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 42319 42502 . + 1 ID=cds.g12959.t1;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 42863 43030 . + . ID=g12959.t1.exon5;Parent=g12959.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 42863 43030 . + 0 ID=cds.g12959.t1;Parent=g12959.t1 #PROT g12959.t1 g12959 MSPAPGADSRVTATGYKRPPPSWGSTAVSDGRNARRGSEERGDERRRDERSPPALRRDPNSGRVRTEDRDVRSVSPAPGADSNVTATGYKRPPPSWGLTAVSDGRESRPRSEERGDERSPPALRRDPSSGRVRTEDRDVRSVSPAPGADSRVTATGYKRPPPSWGSTAVSDGRNARRGSEERGDERRRDERSPPVLRRDPHSNSVRTEERDARSVSPAPGADSNVTATGYKRPPPSWGLTAVSDGRDSRPRSEERGDERSPPALRRDPISGRVRTEELHRTHALPATTAEEARAIGHTRPARSFPEAIKAESDRMEQSVDRPSVLAVPAALSFLQSQPPAVPVQAAPLHLMPARSEDVQLIVAVAGPSSLNGGARDLPTAVVSSGVQESVIASALPPAPATPIDFAHMRYIPHPAHFAAITALGAPGMHAQPPPSHVPAPAPALNTPPSWAASDVASATNDGTVHGLVKAGYKPPASWSSSEAAKDEAMRMPVKAYQPLTSWTSSDSNPTAYLASGDGRLANDRWGMAAPGAGYLGVHGDARGMGSSPPVSHHLAQLRRRITAPVDDSYDGGGDFGDLGDGSASNGDEVPSHLASPPLSPSMVHVYEQYSAVYAMRTTLQSWQPTIVALGHNFTPEPFLFVHMIDTWTEQIELPAKLSFDRRTPMTETVRFLDSIHVHARRRSARVSPYAIMPIVVARGDAVRSIVARCNADEKVMAIRGPELRYFLLPSSSLVGDLLAGSNITMTDDGLFLLVFPYKRPPDSADGNAT* # PASA_UPDATE: g12954.t1_g12955.t1, single gene model update, valid-1, status:[pasa:asmbl_4631,status:3], valid-1 NODE_25_length_61159_cov_40.3473 . gene 18686 24430 . - . ID=g12954_g12955;Name=MERGED%3A%20g12954.t1 NODE_25_length_61159_cov_40.3473 . mRNA 18686 24430 . - . ID=g12954.t1_g12955.t1;Parent=g12954_g12955;Name=MERGED%3A%20g12954.t1 NODE_25_length_61159_cov_40.3473 . five_prime_UTR 24319 24430 . - . ID=g12954.t1_g12955.t1.utr5p1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 23992 24430 . - . ID=g12954.t1_g12955.t1.exon1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 23992 24318 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 23625 23792 . - . ID=g12954.t1_g12955.t1.exon2;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 23625 23792 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 23109 23302 . - . ID=g12954.t1_g12955.t1.exon3;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 23109 23302 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 22695 22800 . - . ID=g12954.t1_g12955.t1.exon4;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 22695 22800 . - 1 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 22199 22267 . - . ID=g12954.t1_g12955.t1.exon5;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 22199 22267 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 21880 21932 . - . ID=g12954.t1_g12955.t1.exon6;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 21880 21932 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 21360 21564 . - . ID=g12954.t1_g12955.t1.exon7;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 21360 21564 . - 1 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 20964 21051 . - . ID=g12954.t1_g12955.t1.exon8;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 20964 21051 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 20687 20692 . - . ID=g12954.t1_g12955.t1.exon9;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 20687 20692 . - 2 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 20297 20440 . - . ID=g12954.t1_g12955.t1.exon10;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 20297 20440 . - 2 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 19780 20021 . - . ID=g12954.t1_g12955.t1.exon11;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 19780 20021 . - 2 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 19523 19569 . - . ID=g12954.t1_g12955.t1.exon12;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 19523 19569 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 19118 19196 . - . ID=g12954.t1_g12955.t1.exon13;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 19118 19196 . - 1 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . exon 18686 18986 . - . ID=g12954.t1_g12955.t1.exon14;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . CDS 18792 18986 . - 0 ID=cds.g12954.t1_g12955.t1;Parent=g12954.t1_g12955.t1 NODE_25_length_61159_cov_40.3473 . three_prime_UTR 18686 18791 . - . ID=g12954.t1_g12955.t1.utr3p1;Parent=g12954.t1_g12955.t1 #PROT g12954.t1_g12955.t1 g12954_g12955 MHSGTRCVWRVIDVACTCQSHRPKERKVHVLSVVNNTLPSLGAEKMGRARIFAVVASLLLIASFSVDRIDAHRTPPAWRRLAANVWHHVTEAAPPAASEDYAIKRIDFKAESAVLKVTPDTFNSLDEVVISWSGVENAGPTDWIAVYSPSYSDNSAYVDYAWATWCPTYAQGYGNITMRLVNMRTDYEFRYFKNNTAYILTAVSNLVRPNDANELLHGRLSVTGVRGEMRFMWVTNSSAHLPTIRFGTSIDNLNRVAIGRSHTYKASDMCQEPATDIHPRNGFRDPGFIHDVLMTGLEPDTRYYYSYGNAKEGFSSVLNFTSVPLSIPEAHRPVSFVAYGDMGESKGDGAASTVVRTAGLLDKIDLVYHIGDISYARGAAYLWEWFAYFIKPVSERVPYMVGIGNHEYDHTEGGDKDPSKAGNGYHPSWGNFGVDSSGECAVPMVNRFHMPDNGNGIFWHSFDYGLVHFVTISSEHDCAASSPQGLWLEADLAAVNRVFTPWVVVGFHRPMYCSEDFPSDYNVTIGLRDTFEDVLYKYKVNLVITGHYHSYERTCPVYKEGCLGDASSPRAPVHVMVGTAGADLDNADYYNKTWSVYHDQEFGYAHLTALDAHTLQMDYHHNHDNAIYDTFEITHNYALE* # ORIGINAL: g12952.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 9565 15797 . - . ID=g12952;Name=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 9565 15797 . - . ID=g12952.t1;Parent=g12952;Name=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 14403 15797 . - . ID=g12952.t1.exon1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 14403 15797 . - 0 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 13771 13891 . - . ID=g12952.t1.exon2;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 13771 13891 . - 0 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 13299 13421 . - . ID=g12952.t1.exon3;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 13299 13421 . - 2 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 13108 13162 . - . ID=g12952.t1.exon4;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 13108 13162 . - 2 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 12400 12597 . - . ID=g12952.t1.exon5;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 12400 12597 . - 1 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 11997 12167 . - . ID=g12952.t1.exon6;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 11997 12167 . - 1 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 11582 11752 . - . ID=g12952.t1.exon7;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 11582 11752 . - 1 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 11203 11381 . - . ID=g12952.t1.exon8;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 11203 11381 . - 1 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 10637 10848 . - . ID=g12952.t1.exon9;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 10637 10848 . - 2 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 10285 10365 . - . ID=g12952.t1.exon10;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 10285 10365 . - 0 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 9869 9959 . - . ID=g12952.t1.exon11;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 9869 9959 . - 0 ID=cds.g12952.t1;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 9565 9614 . - . ID=g12952.t1.exon12;Parent=g12952.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 9565 9614 . - 2 ID=cds.g12952.t1;Parent=g12952.t1 #PROT g12952.t1 g12952 MEGGSGGASPRSSTPPSRRTSGSNSPQARRNHNAEPLTANGLAFLLIPKTPSARRQSEGDSLEAALASPRTHSPHPRRATVSTPNSLRPTSPMPPRQLSEPCPPPPALSPALVRRLSVQDSDAGREMLAFQASADITVDSAAVAEIFESGDMQTLNTSDPLEAVRLAAVQAIPTFAMDGEAMSDGQMMSDEAMASRGTSSMRNSRSRDASPSRNKRRESSPMRQSLLVSRESSPMRQSRDRSPRRTSLDFPSQSSLASSTSCASDQPSEMEAALARLAESASNIEESASAAIDNILPSSGPEGVAGTTGSMSDKHTTTGAAFESLSPNALQRETEKVTPDTADGPSSSGSASTSLPEAGAESSATGASGPDVSRRSSIAVSEGQSPEDGDAKSASTSRRSSTVSDSGGDTGDESMALQPSQPPWYATKEFWIEFAMLRNRFPKALREPRSQARIMWNFVAFSFMIYFTVTVPFRVSFGSPGYYFDYIDYLCDMFFVVDILLNMQTGFMHDGVLVLHEDRCAQNYMKAWFHVDFCSMLPVNWIAYAVGFETLASIPRLMRFIRLLRFRSYLEVFEMKSSIPAFVRLCKLFLLMFLLIHWTGCIYFFIGMQEGLGSNEFVPPLRLENATITSRYLHSVYFSTACLTSLGAAPVPQTDFETVFSLMMQIMGFLMFATIVGNIGEVLADIHRTMSDFRQKLDLLQQYMNQRRVPPDIQNRIFVHYEYLADREQVMDEKEILEELPTYLRREIAVFLNYEMLMKVGIFKDCEPGFINSLALKLKAEVFSPDEYIIRKGEAGAEMYFISKGQVEVVDETGKVIYATLGEGSYFGEVALLLQERRSASVRAKTFCDLFSLCKMDFDDVLLDYPAAAEKMLVEAHRRLATQKGGVTQLRKKWEVAMKATQVINRLKAPEPVEKTKKAPKKADKASLLWQSLRSMGVVAPTMPWNQR* # PASA_UPDATE: g12951.t1, single gene model update, valid-1, status:[pasa:asmbl_4629,status:3], valid-1 NODE_25_length_61159_cov_40.3473 . gene 3519 8858 . + . ID=g12951;Name=g12951.t1 NODE_25_length_61159_cov_40.3473 . mRNA 3519 8858 . + . ID=g12951.t1;Parent=g12951;Name=g12951.t1 NODE_25_length_61159_cov_40.3473 . five_prime_UTR 3519 3572 . + . ID=g12951.t1.utr5p1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 3519 3663 . + . ID=g12951.t1.exon1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 3573 3663 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 3947 4047 . + . ID=g12951.t1.exon2;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 3947 4047 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 4281 4383 . + . ID=g12951.t1.exon3;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 4281 4383 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 4598 4668 . + . ID=g12951.t1.exon4;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 4598 4668 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 5001 5099 . + . ID=g12951.t1.exon5;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 5001 5099 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 5340 5486 . + . ID=g12951.t1.exon6;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 5340 5486 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 5710 5850 . + . ID=g12951.t1.exon7;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 5710 5850 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 6128 6211 . + . ID=g12951.t1.exon8;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 6128 6211 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 6413 6575 . + . ID=g12951.t1.exon9;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 6413 6575 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 6860 6940 . + . ID=g12951.t1.exon10;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 6860 6940 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 7090 7245 . + . ID=g12951.t1.exon11;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 7090 7245 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 7523 7653 . + . ID=g12951.t1.exon12;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 7523 7653 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 7946 8039 . + . ID=g12951.t1.exon13;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 7946 8039 . + 0 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . exon 8560 8858 . + . ID=g12951.t1.exon14;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . CDS 8560 8852 . + 2 ID=cds.g12951.t1;Parent=g12951.t1 NODE_25_length_61159_cov_40.3473 . three_prime_UTR 8853 8858 . + . ID=g12951.t1.utr3p1;Parent=g12951.t1 #PROT g12951.t1 g12951 MADDKSGGATRVLNFNLGVLGHIDSGKTSLAKALSTVASTAAFDKNPQSQERGITLDLGFSSFEVGLPDHLKDLPYDRLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDATKGIQTQTAECLVIGEITCDRMIIALNKIDLIPEAERAAQIEKVSTRLRKTLAATKFASALIVPVSAAPGAAEGSQNSGQAVPPMGIADLMETLKKGMPRPTRNSDGPFSFAVDHCFGIKGQGTVMTGTVISGSISVNDNVEIPSLKVVKKIKSMQMFHKPINTISQGDRAGICVTQFDPKLLERGFVCTPDTIPAIHAVVAAVSRIRYFKGKVLSKGKFHVSVGHETVMARTTFFGTTLSPDEKKTDEATALNLTREYEYFDELTGDSNRVEFVLLEFEHPILCPPKSLLIGSKLDTDIHSNTCRLAFYGRSVVDLPDKKYRETYLPSLKVFKTKAREGTVERIADDYTVIGKALFKKETNIETFAGMKVRLSTGDVGAIEGSFGQSGKYKVRIPSGVSAEAKDIVNGKKGAAGGGKKQASGTGMTAAPSGPASAPSNSGEKESVTSSSGPVRVILEFKRYVFDPLKKMRQ* # PASA_UPDATE: g12963.t1, single gene model update, valid-1, status:[pasa:asmbl_4630,status:12], valid-1 NODE_25_length_61159_cov_40.3473 . gene 57116 60931 . + . ID=g12963;Name=g12963.t1 NODE_25_length_61159_cov_40.3473 . mRNA 57116 60931 . + . ID=g12963.t1;Parent=g12963;Name=g12963.t1 NODE_25_length_61159_cov_40.3473 . five_prime_UTR 57116 57279 . + . ID=g12963.t1.utr5p1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 57116 57612 . + . ID=g12963.t1.exon1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 57280 57612 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 57764 58069 . + . ID=g12963.t1.exon2;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 57764 58069 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 58364 59025 . + . ID=g12963.t1.exon3;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 58364 59025 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 59306 59578 . + . ID=g12963.t1.exon4;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 59306 59578 . + 1 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 59793 59910 . + . ID=g12963.t1.exon5;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 59793 59910 . + 1 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 60090 60509 . + . ID=g12963.t1.exon6;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 60090 60509 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 60732 60812 . + . ID=g12963.t1.exon7;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 60732 60812 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . exon 60929 60931 . + . ID=g12963.t1.exon8;Parent=g12963.t1 NODE_25_length_61159_cov_40.3473 . CDS 60929 60931 . + 0 ID=cds.g12963.t1;Parent=g12963.t1 #PROT g12963.t1 g12963 MMTTRSASTMSRLSLFIAAAALALALCACCASGTETLQFVGSTSEPETYSYAKDPYDKGHKKGMITFTDSLKNTVQKKPFPIKMINTLIYSQKHGGLQFNEIKSEIISYGTPVMVAFGFGIAMGIIMWLVGLIFGCLRLCKLCGGKMVHEKESGKERKWLSVLLAVSLTFLLAGIVIAFVGNADIGTTRDNIIVVGSDTFFNVDKYVRNTFSQVENLAIAQINRLITWFEGFVATVGSDTVPQIYSALNASALPIFATLDDISSKIEGVKATIPAINTTLQTIKPLVQGAVTTDLNTLKTNADAVRSNGQCNAACQALIPAGSEMTVTPVFNSPPDLSSQYNAVKSVSIAADVQAAKNKYMDVGTTVNGSIASVRVKALAEIAKFKDSMDDVANKTRDFVNDFVNKNFNATSKSKDLKKALGSGSTAETYDNYRSWGGYAIVGVAALAWFLSFLGFVMGSCSYKVARLPGERSPTSNHAGNIMIASTAFAFFISLFVWWLCALFFLLSMTTTKTCDVINLPEFYPSVIDNTTNFDGYFLGRLVHNDPNLPIRLGDLLTGCANDLAPWSLLQLDRKFNLTDKLNYKATIDVQKALNFTVDAVTVTTSSFSNAVNNYIANSNLNGIDFASLQTAAVTPIVSVNLASLAQNITTAYAATSDAGLQAALTALNNTLTTLRADVAGVETARASLPAQVTYLSSVNATLATQVTGVLANITTFANTIATTGTSIASD* # ORIGINAL: g12958.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 35485 39117 . + . ID=g12958;Name=g12958.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 35485 39117 . + . ID=g12958.t1;Parent=g12958;Name=g12958.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 35485 35586 . + . ID=g12958.t1.exon1;Parent=g12958.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 35485 35586 . + 0 ID=cds.g12958.t1;Parent=g12958.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 35983 39117 . + . ID=g12958.t1.exon2;Parent=g12958.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 35983 39117 . + 0 ID=cds.g12958.t1;Parent=g12958.t1 #PROT g12958.t1 g12958 MGSTADEWNLPIVQVQGPEERDFESIVDGRPGLDGVFWYLLQWAPMPSFPDVGRTWEPQAHLEECPEEVDAFKLQHYVRCSGVRPDPLPVRVGDDSVEERVMIARLRAARAAYNGRLTSDSTHATSVSAYGGVGIGSSGRSEVIEWGDDAPKGDAVSNLPSAHALEVNSGAHGRRRDGKIQKGSGRGRGRGRGRGLDDVEGTGVATQDDRHFRAAAIHRTGKGKAKGIFVSEAVPKRKKHSAGRKKAKEDEIVAMATALSSVAAVAAVGTDLLRQKASRPADEAQSVENMASTAAVEALAAIDRAGKEEVVSAKEVSATPATPVERKKSWSAHRAAMEGMQTVVATVTSPLGVLTNVDARARSRGPAVSKATQKKRSAVGSLRDKARKPDTDSSHDSTTDNGSDYEAVPRVRRPAVKRTPSVDSSRPAVKVPRTSEPIARMSPIETASAPASAPVVITHESKRVLSDDDEAAQPRKRSRLRRVGDESDDEIPLSERMQHKLERRPSATNSLFPATKAAVGARSKDISKAEESRDGDSLSHLSVKRIGDKAAHKDEEKKRKRALSIDEDLNGAPHSEANHGQRLYKIPKKSTSKLPVLDAPCFVCFDRWANVMCEGCARSFHAHCIGVDEDRPPGKKYRCDDCVSQSFECRVCGKRDRMERGMHRCSIAGCATTFHVPCLFAFSEGAKNFRMRIKCGCHTCGRCGGDILPEQLNPCICCTRGFHPWCLEKEPHTKVGGRYIVCQNTDQLHTRIASSDTFNLDQPRAADNRGDRSGVAVAAPPSGPSRGVADLSFGSQSTGALSESLLAKALSVGDKMSPLTRSFNMRDPRIRRLIGADVQTDPHPAPAEPGRGAPISAAMSSSLETSQSVQPQPWTDSNDSPYMDSGHSMPMEWHEIPEDNIRVYMDTATNNRSNALVSETKSGLETLASATGTDNALSKTKQEGGYKRPPPNWGSTAVSEGRNAGRVSEERGDERRRDERSPTALWRDPNSGRVRTEEPDGRSVSPAPGADSRVTATGYKRPPPSWGSTAVSDGRDSRPRSEERGDERRRDERSPPALRRDSSSGRVRTEDRDXXXET* # PASA_UPDATE: g12961.t1, single gene model update, valid-1, status:[pasa:asmbl_4627,status:12], valid-1 NODE_25_length_61159_cov_40.3473 . gene 48327 52417 . + . ID=g12961;Name=g12961.t1 NODE_25_length_61159_cov_40.3473 . mRNA 48327 52417 . + . ID=g12961.t1;Parent=g12961;Name=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 48327 48575 . + . ID=g12961.t1.exon1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 48327 48575 . + 0 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 48816 48934 . + . ID=g12961.t1.exon2;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 48816 48934 . + 0 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 49311 49347 . + . ID=g12961.t1.exon3;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 49311 49347 . + 1 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 49753 49920 . + . ID=g12961.t1.exon4;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 49753 49920 . + 0 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 50268 50382 . + . ID=g12961.t1.exon5;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 50268 50382 . + 0 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 50627 50717 . + . ID=g12961.t1.exon6;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 50627 50717 . + 2 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 51158 51351 . + . ID=g12961.t1.exon7;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 51158 51351 . + 1 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . exon 51650 52417 . + . ID=g12961.t1.exon8;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . CDS 51650 52044 . + 2 ID=cds.g12961.t1;Parent=g12961.t1 NODE_25_length_61159_cov_40.3473 . three_prime_UTR 52045 52417 . + . ID=g12961.t1.utr3p1;Parent=g12961.t1 #PROT g12961.t1 g12961 MSRRGTDRNGDGGLIEMTVSSAADNFQAFGNVDAVHPVSHVDTRNANIALDESNKVSRQKYAVGVVLIIVVVVMWVGSSELQQYMYNDDFEKPFFVTFYNTASFMTYFIVVALRKNSRDALKCAVLDGFESCRRRSTGGYRPLAPSRIIRADARDQSIATDDGDDHAALIAGESVNESASGVIHEKLSVGETMRVSLVFCVLWFAANYAFDVALSMTSVASSTIISSTSGFFTLALETAFIKRAQPNHILSSQIVAIAMSIAGVALVAYSDQVKAKQDSGDTKHPDTILGDLIALLGAFLYGCYLVFLKRRIGDEDAVDLPLFFGFVGLFNVLVLWPGFLILNASGFEIFVFPSARLWGFLTLNALLGTVASDYLWLLSSLLTSPIAATLGLSLTIPLSLGADVLLGHVTVTWMYYVGMLLVLAAFVMLNLSSYYEFNAADAAVRFVRSQCGRLS* # ORIGINAL: g12949.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 221 945 . + . ID=g12949;Name=g12949.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 221 945 . + . ID=g12949.t1;Parent=g12949;Name=g12949.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 221 355 . + . ID=g12949.t1.exon1;Parent=g12949.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 221 355 . + 0 ID=cds.g12949.t1;Parent=g12949.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 631 945 . + . ID=g12949.t1.exon2;Parent=g12949.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 631 945 . + 0 ID=cds.g12949.t1;Parent=g12949.t1 #PROT g12949.t1 g12949 VLDLLPPDTPLESIERFLSVAIRESVHHHRDALVIKNLHRAQYLSTRAEYIQVSSRPVIITEETTCIVCGRHFADGAVFARTPAGGIAHLHCARDREREHERGGDSSDKNLRRTSLFAHGKASMRYAASVEDETAARVQQRWPRSTNAL* # ORIGINAL: g12950.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 1429 3159 . - . ID=g12950;Name=g12950.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 1429 3159 . - . ID=g12950.t1;Parent=g12950;Name=g12950.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 1429 3159 . - . ID=g12950.t1.exon1;Parent=g12950.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 1429 3159 . - 0 ID=cds.g12950.t1;Parent=g12950.t1 #PROT g12950.t1 g12950 MAYGGNTDPLTTGTDQATQQQPTQTQQQQQHHPRRTRKRCLADSHGDDVSKRDDGGDEAELRREAKRLRDSMDDNVLSRAHPHGVKPLGNIYIDETPSCREEGLGIFRFLSDELLITVLEMMEADVLSVLGATSKAMYAFTRHDELWKSLTVRDFASSGFAFKGSWRATYSTSCVARRRFATADAEAAATTATTTGTTSSPSSAAPNANVHAYIANPPITVRGLYSDELFRPWHCATLEFDPIWGSTDNIDRRSSLSLADFIREYERPNRPVIITDAVTQWPAYAKWDKEYLLGLCGDVPFEAGPVHIRLADYWDYMTATREESPVYLFDPRFAEKVPQLGADYSVPEYFGEDLLSLAGADRPDFRWLIIGPAKSGSVFHIDPNSTSAWNAVVRGSKKWIMYPPECVPPGVIPSCDGSEVTSPVSLAEWFLSFYAQTRYGGTAQRPIECVCRAGELLFVPRGWWHLVINMEDSVAITQNYVSSQNIVHVLDFMQNKPTQVSGVPRDMRFRMGDILEARHRSAFPGRLDAIREEDKAHALRTEKHRPISLWDSITDGVASSDSDAKKETASFSFGFS* # ORIGINAL: g12960.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 43410 47910 . + . ID=g12960;Name=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 43410 47910 . + . ID=g12960.t1;Parent=g12960;Name=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 43410 43829 . + . ID=g12960.t1.exon1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 43410 43829 . + 0 ID=cds.g12960.t1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 43984 44471 . + . ID=g12960.t1.exon2;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 43984 44471 . + 0 ID=cds.g12960.t1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 44589 44761 . + . ID=g12960.t1.exon3;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 44589 44761 . + 1 ID=cds.g12960.t1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 44962 46218 . + . ID=g12960.t1.exon4;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 44962 46218 . + 2 ID=cds.g12960.t1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 46470 46886 . + . ID=g12960.t1.exon5;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 46470 46886 . + 2 ID=cds.g12960.t1;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 47213 47910 . + . ID=g12960.t1.exon6;Parent=g12960.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 47213 47910 . + 2 ID=cds.g12960.t1;Parent=g12960.t1 #PROT g12960.t1 g12960 MASTVTSRGSCSDGDAPHRAKQQRKPTKHNAGDSDSSQKKDKLRTSKDIYDRLIWNPSWDLTRVKIGYLDRMSGMVEMPLLNWVPTQQDGDIPWHRVHYFRMDDELLWDRESRVDVIFNSGDSARGSVRIPFSAHPNYSQAIVNTEQMNEETHRTGHARPRPSDADSRRVIAIPTTTTESSFFAYDAASTEWIQRDSRVAAYSPAESAVGDVRDRLRVITYNVLFDIHDADVIYSEDRYPAIMELLREADADIICLVEVTPRFASIALSRDWVRSQYLSTDGGDGTTVTPYGQLILSRIPFVRVECLPISRHKDAVCAMLRVNGRRVCVAAVHLSSSRNRDASESRAREITAVSEAILSKLGPDDCIIAGDFNMTTGEGSLFSTSDWIDAWPAVYPNDDGLTFNPVANPLAAVTSVSGNSARYDRAYLRSSRWRPCAARLLGSAPFDGNQRFLSDHYALSVDFECAGGVHASRMLGRAVTSAVVLSPPEALWDAIQAIRRVHDKSFVRWLPHINLLYPFIKDEGESFADAARSFFTALSDFPPFAITLDEFGYFSHSRSCTVYLKPKARYLKPLPADGDRPRSPLLDLQGRLQAEYPECNELSSIGPNGFTPHLSVGQFKTVQEAQKCIGGWQAAWRPITFEVNAVSLISRAGQSPFEVRAVVPFSGKPVPWGAVFGSDIPSSTISGAVDDADVVQTAPLIGQSESSADAVVSIIGDAARAVVMSMCPAAKKLFEGVLAVGSVQLGVQTRGSDIDLVCFGPNEIPREAFFSALNVELSKVRGIASARIVRDALVPVLTVTWQTGTCADVQYARCARPTPVNDHLSIAKISQKDMRAMDDESQSAAAAWLNGRALLEASRGADGTHDAFRKLLVLVKQWAVARGIGSSAFGFLGGFSLAVLVAKFCSVNAAEAVASVVSDKEKWLQFVRHFFSFVHTWDWPRPMSVGPLGAFQPREDPMPIATPTFPVKNSSRNVTKSSFAVIMTEVSRAMDTLSASGDDAGLAESASAAFYCGHSEFALVQVQHLEASESAACEGWLRGKTASLLTALQNSGVLARAWPAVYVDAHIFREEKRACHYPHTTSIVVGLAGTGNGGVASGALFRFRDQWDAWSAKPVGGNCEAKVVAADNACVQMARAIEARALCAGASTRH* # PASA_UPDATE: g12957.t1, single gene model update, valid-1, status:[pasa:asmbl_4626,status:12], valid-1 NODE_25_length_61159_cov_40.3473 . gene 28618 34764 . - . ID=g12957;Name=g12957.t1 NODE_25_length_61159_cov_40.3473 . mRNA 28618 34764 . - . ID=g12957.t1;Parent=g12957;Name=g12957.t1 NODE_25_length_61159_cov_40.3473 . five_prime_UTR 34301 34764 . - . ID=g12957.t1.utr5p1;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . exon 30890 34764 . - . ID=g12957.t1.exon1;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . CDS 30890 34300 . - 0 ID=cds.g12957.t1;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . exon 29057 30726 . - . ID=g12957.t1.exon2;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . CDS 29057 30726 . - 0 ID=cds.g12957.t1;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . exon 28618 28801 . - . ID=g12957.t1.exon3;Parent=g12957.t1 NODE_25_length_61159_cov_40.3473 . CDS 28618 28801 . - 1 ID=cds.g12957.t1;Parent=g12957.t1 #PROT g12957.t1 g12957 MVLLRMCRANFVRRRRIVAVLVAAIALFFYLNSSNVAISSSLGIIISGIDRDGVTDEVGSGVLPLQKDVVPVAIVSTLSMRLCVTGHCAVHLLEDGFGSLQRLLRSDESQASTVDLQVDVALIRTKMSSASPWHPTPQTHRAYRTRAPLDLRGGDRDPTGALRDAWGQGLARAGYALVVMVYEPDMYDACGWELMPIVSALRGRTPTLLVVPLVPVATARNEWKALSMHIAHVDKIGVFFESDAASLEINYGVERTNIIVMSPSFGGNRFEAAASVDMARTIAENARKELGFSTPYALVYAATASGADAAAEAIVTAMPAILNAAPQAILAIVGVNNVDRLQEFARSLEVHGRVRLLATGLDTDDKMLMQLIEGCSCLVVASRNVAATGVAMAAVAMGKHVTVAFSSVQVGELVAETLRVDVPDNEDESEEPKDWKATVAEAAISAEGTVHRNALAFAHASPWKNAASRILAQLCLSSDKASAVPSRGHAAAPLACDALSLSAFASSGKRRGTKAASTTFESAHAGILVAGAGLLSTFGEHVVPFPKMQPQNTYSLFATVEAVVIGHVYEPSTRAKVAVPMAAGLFPDSATRGSSSRAWPRAAPLASSLVSLNLAPDVIAGIAVTFWGDAENTIVVDGASGTVVMGTQELQEGKLYRLKSHHADRDEQRVVKVIVRSLLPSINVRIVHWSFTLDVRGWIVNDMSLHILRRSQHGLMLRFTMHSPLLTPEGIFGVTSTMAGDGDLCLPSDSVDACNQKYVESAETRYFYRPEFPAPITSETASGVKLLKMMAAQSASLPRTLSLTVARDMFDVRAALLVVDNGGDKQGATLRTIGGTTTRNPVPSSEGPYPIRLHWIGPTHAFGVTARSEGYKMSQTNKVDAEWEYLHEDQLLGDRYLSELQSHPGIDVISTPTTQLRNPSSASRHVSLTAQRREEQEALAYMFEQNVPVENDRDDDDVLDVHDAFAPHAVVLHGTPPSYASALKHTGGALVVLAQAPYGAVSLEFAQWLEASADRVVVPSTASKNVLVAAGVTTERIGVVPSGVGTYVPCLGDGDCASGMDVQTLRMYEKRKGRTRKFVFIGSGTSRHSLDVVLAAYAREFSSEEKVTLDVHIVSGAVDPDAAALLRTKYSRPGSPSLSLTVHTGAYAGALNTSSASILAEAILSASCVIAPSRADDRSLVALDAIAASIPLIAVASGPLGDITSPGLQHNLVDTAGDPQDTTDDKGLRWPFLFAATPTQCAKPPCGKDGASILSGRLASARPAWAQVPILAVAKAMRAFVDEIDLANMQMQPISSELRGSHAWGESHRSLTHQVEQAVARDLARRGRSSPAVAADSDKRALAKKLAQSLTCGDSPSGMGGDIADLGWVFRDCDYDALLPSMPWKPWNAPREVYEAIKDAFVGWASIDPKGVSDAHAALMLDPDAMQTAARFQMIGGRLFVSACTGVAYDDHRARAETKALIPLLMYLAARADMLSIDIVASFRPHRPSRSPPAQRIPIVVTCKAPSDDAALLAPRASLLWSDKWHMKNGTLRNSEGPRDPVPWAKKVPKALFRGALTSKTRLDLIRLSRERSDIIDAGITSIPFDPREAREWAKEASITTVPPMSAAERDRFRFVLIADSGDDCEGDALREALAGTSLVFVQTPSRVEYWYRWLQPSVHFVAVKADLSDLAERIEWAVVNDDVALAMVQRANKFVRTYLSTDFILQFFAIFVEEYGRRMVKWSGNIAPHARSAILSPHLCKGWDSVRILANAK* # ORIGINAL: g12956.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 25015 28126 . - . ID=g12956;Name=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 25015 28126 . - . ID=g12956.t1;Parent=g12956;Name=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 28097 28126 . - . ID=g12956.t1.exon1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 28097 28126 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 27873 27946 . - . ID=g12956.t1.exon2;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 27873 27946 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 27348 27675 . - . ID=g12956.t1.exon3;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 27348 27675 . - 1 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 26480 26653 . - . ID=g12956.t1.exon4;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 26480 26653 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 26294 26380 . - . ID=g12956.t1.exon5;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 26294 26380 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 26002 26110 . - . ID=g12956.t1.exon6;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 26002 26110 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 25610 25773 . - . ID=g12956.t1.exon7;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 25610 25773 . - 2 ID=cds.g12956.t1;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 25015 25200 . - . ID=g12956.t1.exon8;Parent=g12956.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 25015 25200 . - 0 ID=cds.g12956.t1;Parent=g12956.t1 #PROT g12956.t1 g12956 MEEEVVADAQTFLRFRLSDDFIHNDVPLHLVDQRTRLLDLLRRTVHHGEGNSVLLIGPRGSGKTFILRHALRELHQPYNNCPGECPYIEVHLNGLLHTDDRLALDAIARQLCAESDVEKYAKASFAETLAHLLGVFRRGNKDSKDAVEMLEKRVKSRYSHRQIHCFCTYSFDVYTATLKDVLTLGSDFPHSAFAADWNTRIVAFVADSSVVSYLRRQYDLDKSFRSLFGFVAGALWRISSANPFLEPAFLYECVQSQSLDAKAALLQGASVLELCLIVAMGRVVDRIEGEPFNFAMVYDEYKKFAMGNTRTVDFFSKPVAMKAFEHLSDLEFTCPADSGAAASMPREYRMVRLLLEQPQIVEALNKYADCPTSLRQWGTQWLE* # ORIGINAL: g12953.t1 original gene structure, not modified by PASA NODE_25_length_61159_cov_40.3473 AUGUSTUS gene 16616 17885 . + . ID=g12953;Name=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS mRNA 16616 17885 . + . ID=g12953.t1;Parent=g12953;Name=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 16616 16806 . + . ID=g12953.t1.exon1;Parent=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 16616 16806 . + 0 ID=cds.g12953.t1;Parent=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 17018 17369 . + . ID=g12953.t1.exon2;Parent=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 17018 17369 . + 1 ID=cds.g12953.t1;Parent=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS exon 17658 17885 . + . ID=g12953.t1.exon3;Parent=g12953.t1 NODE_25_length_61159_cov_40.3473 AUGUSTUS CDS 17658 17885 . + 0 ID=cds.g12953.t1;Parent=g12953.t1 #PROT g12953.t1 g12953 MAQTNGNAASSGRVLVIMSGADKLTLKEANKTINTGFFLVELFKPLKKIMDAGFMPVFANPTGIMPAMDPMSDSVVWFMGSRADYKAAHRMVDDLKRSANFAAPQRFSEVTDDDLEGFSGVFIPGGHAPMEDLVNDRELGRILTHFHERQKPIGALCHGPIALLSSRLANDGGTFPFSGYQVTVYSNWEEKMTELLMRGSVPFYCETKLRDAGALTKENWPMLPKVTVDRELVTGQGPSSAGAFGERFVTQLQTAH* # PASA_UPDATE: g12962.t1, single gene model update, valid-1, status:[pasa:asmbl_4628,status:12], valid-1 NODE_25_length_61159_cov_40.3473 . gene 52714 56356 . - . ID=g12962;Name=g12962.t1 NODE_25_length_61159_cov_40.3473 . mRNA 52714 56356 . - . ID=g12962.t1;Parent=g12962;Name=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 56267 56356 . - . ID=g12962.t1.exon1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 56267 56356 . - 0 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 56057 56166 . - . ID=g12962.t1.exon2;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 56057 56166 . - 0 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 55857 55909 . - . ID=g12962.t1.exon3;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 55857 55909 . - 1 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 55281 55401 . - . ID=g12962.t1.exon4;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 55281 55401 . - 2 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 54934 55061 . - . ID=g12962.t1.exon5;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 54934 55061 . - 1 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 54639 54721 . - . ID=g12962.t1.exon6;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 54639 54721 . - 2 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 54386 54448 . - . ID=g12962.t1.exon7;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 54386 54448 . - 0 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 54090 54187 . - . ID=g12962.t1.exon8;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 54090 54187 . - 0 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 53724 53829 . - . ID=g12962.t1.exon9;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 53724 53829 . - 1 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . exon 52714 53443 . - . ID=g12962.t1.exon10;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . CDS 52730 53443 . - 0 ID=cds.g12962.t1;Parent=g12962.t1 NODE_25_length_61159_cov_40.3473 . three_prime_UTR 52714 52729 . - . ID=g12962.t1.utr3p1;Parent=g12962.t1 #PROT g12962.t1 g12962 MTDLFRIIAGSYDKVLYGFTCKATEKKDGLFVGIVPKFVYPPHSSCIKAVAASGRFLATGGSDETIRLYDLDRNSELGFLLQHQGSITSLQFHGTSHMLSGSEDGTLVIWRTKDWENLGVLRGHSAAVNSLSIHPTGRLALSVSRDKTMRTWNLVRGRSAYITRLKSEAEIVQWSPDGRRYLLVQDRRLSIYRVEDSEVIAEFESPKRILAATFVHNDRVAFGGEGHDIVVHEIESRKRTTIINGHTNRVRCLHTVPNPLASGALWLVSASSDGHIRMWNIEGQQLKAEQTAEDSIADENTRGRLTCLVAVPMTADEDSDATKSSLADAIGSEVVDKKTKAVRAREEEEDSENDSVDGDDAEEEDASEDLAPARGAKGGQKKSAKKVKSVDAAAVTKPPVKASANGGKTVGKKVAAAHGVKAQEGGRGKRKAGDASDAEEDARPAKKAKAVPIVKTQSQPPKQSQPQKQKQSQPQTQTQPQKQQQQAKAKSPVMQHKAASGASARKNGGGSVGKFTVVKKK* # PASA_UPDATE: g8493.t1, single gene model update, valid-1, status:[pasa:asmbl_3278,status:12],[pasa:asmbl_3279,status:12], valid-1 NODE_2014_length_8099_cov_40.1387 . gene 2859 8059 . + . ID=g8493;Name=g8493.t1 NODE_2014_length_8099_cov_40.1387 . mRNA 2859 8059 . + . ID=g8493.t1;Parent=g8493;Name=g8493.t1 NODE_2014_length_8099_cov_40.1387 . five_prime_UTR 2859 2997 . + . ID=g8493.t1.utr5p1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 2859 3099 . + . ID=g8493.t1.exon1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 2998 3099 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 3297 3397 . + . ID=g8493.t1.exon2;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 3297 3397 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 3601 3703 . + . ID=g8493.t1.exon3;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 3601 3703 . + 1 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 4120 4233 . + . ID=g8493.t1.exon4;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 4120 4233 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 4425 4655 . + . ID=g8493.t1.exon5;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 4425 4655 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 4807 4997 . + . ID=g8493.t1.exon6;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 4807 4997 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 5174 5289 . + . ID=g8493.t1.exon7;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 5174 5289 . + 1 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 5455 6491 . + . ID=g8493.t1.exon8;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 5455 6491 . + 2 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 6747 7131 . + . ID=g8493.t1.exon9;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 6747 7131 . + 0 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . exon 7376 8059 . + . ID=g8493.t1.exon10;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . CDS 7376 7557 . + 2 ID=cds.g8493.t1;Parent=g8493.t1 NODE_2014_length_8099_cov_40.1387 . three_prime_UTR 7558 8059 . + . ID=g8493.t1.utr3p1;Parent=g8493.t1 #PROT g8493.t1 g8493 MVQASPQYFSDVSPPKSFKTDSRTLSRNSSASDMVATISQARTNRWVPPSVFRDCVASEELVFRKVRGILNRLTAEKFDSLCDQLINVGITNINVLRGIIVLLFEKALDEPSYSSLYAEVARRVSAVAPNFDDGTGNQGATFRTLLLNKCQEEFENRSNAFAAFNTHPGPLGEEDEEKRTVARRKMLGNIRFIGELGKLRLLSSKVIHECIKQLLQGKVQDAHPEDIECLCRLMRTVGKAIDTDEASSYMDAYFNRMNELIHSDKMPNRLKFALEDIVELRKNQWIARRVSMMESKPKKISEIHAEADMDHLVQAMQARGELSSPLAGSPGSNSPALNRNSSPRGSFLLQGRGSPAVGLGSNGFSSPVGGLVSNADPTNVMGTPPDIERLRRISSVTAVDGTSLRPHVFVPGGGAIASLPPSTRKQEGTSQPLPPPIEKPVLPPPIEKPKFQKGRKDSGGSKTPPTQQTLVPTPEAAPQPSADDLAKLTSAMLAEYLSEPDDGEAAQCVKDMRSPEYHPELIVRIFMEAVEKGEGDRLSLGKLASSLVVKGAVSRAGYIAGVVKTLDTKEDLAPDVPHIARYLAAFIARGVADGALPLEEALGLLKPRADVAFDEVVFEFLQALGDFEGSEKAAVDAKRCESLLLVCVAEAGGSKDRLLDLLVAKNLGQLFPVASLAPFVRATIAAADAQPAGVVKSIREKASNMPSVLSEFDFALVLADALIERITGDAQSSDDSNDASVTSPQTKSAKQKELQLMTKWMPVAKAFVAGRHVLQVAVLYAAQVSAHRKGFPTGLLERHFDALYNLDIVDEEAYNIWKEDVNDSLPGKQRALFQVNRWLNWLATAESESDDDE* # PASA_UPDATE: g8492.t1, single gene model update, valid-1, status:[pasa:asmbl_3280,status:3], valid-1 NODE_2014_length_8099_cov_40.1387 . gene 512 1925 . - . ID=g8492;Name=g8492.t1 NODE_2014_length_8099_cov_40.1387 . mRNA 512 1925 . - . ID=g8492.t1;Parent=g8492;Name=g8492.t1 NODE_2014_length_8099_cov_40.1387 . five_prime_UTR 1882 1925 . - . ID=g8492.t1.utr5p1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . exon 1813 1925 . - . ID=g8492.t1.exon1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . CDS 1813 1881 . - 0 ID=cds.g8492.t1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . exon 1586 1696 . - . ID=g8492.t1.exon2;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . CDS 1586 1696 . - 0 ID=cds.g8492.t1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . exon 1076 1244 . - . ID=g8492.t1.exon3;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . CDS 1076 1244 . - 0 ID=cds.g8492.t1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . exon 512 690 . - . ID=g8492.t1.exon4;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . CDS 686 690 . - 2 ID=cds.g8492.t1;Parent=g8492.t1 NODE_2014_length_8099_cov_40.1387 . three_prime_UTR 512 685 . - . ID=g8492.t1.utr3p1;Parent=g8492.t1 #PROT g8492.t1 g8492 MSDLKWAVQNGDLATVKKCIEEEGIDVNGDLNGRFPIHYASDYGQAEVIDYLVSKGAKVNVTDKHGITPLLAAIWEGHTSAVKTLLSKGADKTGKTPDGQSYADVAEKSEIQALLKG* # PASA_UPDATE: g2652.t1, single gene model update, valid-1, status:[pasa:asmbl_5531,status:12],[pasa:asmbl_5532,status:12],[pasa:asmbl_5533,status:12], valid-1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . gene 89 3943 . - . ID=g2652;Name=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . mRNA 89 3943 . - . ID=g2652.t1;Parent=g2652;Name=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . five_prime_UTR 3820 3943 . - . ID=g2652.t1.utr5p1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 3679 3943 . - . ID=g2652.t1.exon1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 3679 3819 . - 0 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 3221 3376 . - . ID=g2652.t1.exon2;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 3221 3376 . - 0 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 2311 3106 . - . ID=g2652.t1.exon3;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 2311 3106 . - 0 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 2022 2143 . - . ID=g2652.t1.exon4;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 2022 2143 . - 2 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 1569 1829 . - . ID=g2652.t1.exon5;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 1569 1829 . - 0 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 394 1441 . - . ID=g2652.t1.exon6;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 394 1441 . - 0 ID=cds.g2652.t1;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . exon 89 160 . - . ID=g2652.t1.exon7;Parent=g2652.t1 NODE_3082_length_4374_cov_52.6653_potentialcontaminant . CDS 89 160 . - 2 ID=cds.g2652.t1;Parent=g2652.t1;3_prime_partial=true #PROT g2652.t1 g2652 MADSGGSSVGTLPESVALLNLRVKTLSDAEYGVSVPSTASVIALKQQIAATASIPVEQQRIIYQGKVVRDDKNISDYHICDGHVLHLVQRPQDAPRNAEQEPPSSQQQQHPPQHATGAPGQHPHGIPHMQTFVSINVPHGALGVMQHVVQGVLGVPVPVGGAHNGMGMPAASDSQAPQGTAPPGSTPEQQQQQQQQQQQQQQQNRRGAPPVRGGVGARRSSRQQRERRIRISQTLVDRIRPVVARSIFPPAVPGAASPLAAAVSEMSGDASSVANAVDAAGPQSVEDAGAVVMNDAPPVNDTPAVDTTSSMEAESHASSAPHVPATEGESAAGATAAASNVAEGAGSGANLRSIGVNTDQPPATSVTFDEVIAALGSLRTVGEDVGNRLTEIIDYAARQTDAPVTSPEERGVVANNLRDFAAAFRLMGQLYDTLLPLVHNIRINSAGQLYVQSSRGQPQQQQQQQGGQEQPHQHGIPIEVRVHSFGMGGPDQAAMLNHIARAFGVPGMAPGQQPGPQQPNGPPGQPGQPQQDHQPPTGPAGEAPQQHEQQQQQGQQQGQQQGQQQGQQQVPLAFNPLDVLGGLMQMFPPGLFQPHPAQQQQQQPPAQQHPHQHQPQHQHQQHYHHHQQAAPTNQQQQQQQQQQQQQQPQQQPSQSPQVPRSAGARSTNASPATQRRHAPEQDGLAMFRGIFNQPHQQQPPQHQQARMAPSGSTNASPRAVPATPLASGNTANNSTANTTAPAFPGLEVFRGIFGANPRAAAGRPGVSPQPVAPVASTAGAAASRAASNPSNAHGDRQQEATDAVVLDDFARAVEELRAHGGPPGSLGHTMGLIAEAMQQPETRTGSFANIARNVMALNGTGEDDG # PASA_UPDATE: g13007.t1, single gene model update, valid-1, status:[pasa:asmbl_7034,status:12], valid-1 NODE_4156_length_2102_cov_33.184 . gene 118 2007 . + . ID=g13007;Name=g13007.t1 NODE_4156_length_2102_cov_33.184 . mRNA 118 2007 . + . ID=g13007.t1;Parent=g13007;Name=g13007.t1 NODE_4156_length_2102_cov_33.184 . five_prime_UTR 118 118 . + . ID=g13007.t1.utr5p1;Parent=g13007.t1 NODE_4156_length_2102_cov_33.184 . exon 118 347 . + . ID=g13007.t1.exon1;Parent=g13007.t1 NODE_4156_length_2102_cov_33.184 . CDS 119 347 . + 0 ID=cds.g13007.t1;Parent=g13007.t1;5_prime_partial=true NODE_4156_length_2102_cov_33.184 . exon 1115 2007 . + . ID=g13007.t1.exon2;Parent=g13007.t1 NODE_4156_length_2102_cov_33.184 . CDS 1115 2007 . + 2 ID=cds.g13007.t1;Parent=g13007.t1;3_prime_partial=true #PROT g13007.t1 g13007 EFYTRHALFRDGERMGILFSLIAGLSLMSFAMPVDNASLESPDDFPLADMTAVHKQRTYSLPCYADADIDQRGIDGGTNGPGSGGDRSTSGSSNAMRSPQPAACQACSLKASTSIGGPGQSPGSRASASSASPVSKRRTHSCGREGLDSLSAVAVAAAANAERLSSAVDAPIVHESRRRKQKSTRPKARKTDPRYDISFDSLQHSSFDDLDGGSVLLEDDDGRVRSSTGPDDTDSRDATVEHEDVDYTDILKRRVNAAAASPGHSFTEPSVLTAAFSAMANGRRAAPSNIHQLPMQFGGAFVVSSDAGGAAEVSRGQVSGFVSQSAGDHSAADGRGGDGHVQPLGTVVSGAAEDAAPHVPMQEISLPGVGPLVV # PASA_UPDATE: g921.t1, single gene model update, valid-1, status:[pasa:asmbl_8776,status:12],[pasa:asmbl_8784,status:12],[pasa:asmbl_8785,status:12], valid-1 NODE_66_length_46074_cov_42.1081 . gene 18020 24910 . - . ID=g921;Name=g921.t1 NODE_66_length_46074_cov_42.1081 . mRNA 18020 24910 . - . ID=g921.t1;Parent=g921;Name=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 24074 24910 . - . ID=g921.t1.exon1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 24074 24910 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 19812 23906 . - . ID=g921.t1.exon2;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 19812 23906 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 19354 19617 . - . ID=g921.t1.exon3;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 19354 19617 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 19018 19185 . - . ID=g921.t1.exon4;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 19018 19185 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 18699 18833 . - . ID=g921.t1.exon5;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 18699 18833 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . exon 18020 18563 . - . ID=g921.t1.exon6;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . CDS 18378 18563 . - 0 ID=cds.g921.t1;Parent=g921.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 18020 18377 . - . ID=g921.t1.utr3p1;Parent=g921.t1 #PROT g921.t1 g921 MADNNDNGDETIAPTHVDGEEEDAVVDGSEAVAAANTEEEPAGTAAVPAHTDGNQDDNIDADVVVSDSLFDAGDDNVVGGDAAIPADDEGAGGDAVGELPEGTAEVTRRDPHRPSIADIEAPHHIDESVEGPPIIEKRFQSTEDLEEPDAAEDAAPEAVVSDEVGPPLVEPPAPPPAEEPVVGDGEGEGEEEGSGSTIPDDFFYDTPEVVEQAEDQLSPDTSLLFHSFGYECRKRSNLHFLEDDVIMFAAGNVVQIVDLATMKQDYLRSTSGRGIGALAVHPTREFFAVAEKGSQPNINIYHYPSLRLYRVLRSGTDRAYAAVSFNQSGRMLASVGASPDFMLTVWDWRAERITLRSKAFSQDVFRVSFSPENDGQLTTSGTGHIRFWKMAQTFTGLKLQGYIGKFGRTELSDISGYVELPDGKVLSGTEWGNLLLWDAGLIKCEISKKGGKRCHKGMIEECYMEEGELVTAGADGYVKVWDFETIDNADITEDSNVFELDPMSEVKVGSNVRIRSLVKSPNKETPSIWYVQDGSGSIWKIDLSLDAKARPPERLLSFHAGPVLALDVSPVSHICASAGDDGAVRIYDYVMKTSPFSARFRTAATCLVWAPKQLDSTGSTLVVGFADGIVRLLRRTTESLQLSQALKPHNGRVTTLAYDQLGKRFASASEDGTIFFFAVTNNKFEPLGFVRTPSPVMSLCFSPPPTPGDFILACCKDGDVIEIASPVPGAADTSQTYNLEGLAKRSFRFKGLKVLRKKERVEVKTPDGAPDGHKEGHAEPDAHKEADAADGAAEGDAKEGEEAAKKEDEFEEVSVDGKALCGFYTSKTRFYLSFDAPGAGKLYECSFDDDTVATEVLDLHTDSPCTAVRISSASKYLLAGLRDGGVRIIPLLDTSSYWKDNVHDNDYGQVTAVCSSFDDSFLFSAGTDGNVFVHRIMTEAVQHPYDGDLLPASAGVIDDVDEAAAHSIEESRQKAEQDRKAKVSDDKKEGMRRMVDDLRREFLRVLDRNNALPKHMQIPRDGFDMDPERRQQMLQEREDRLALTKKELAYEAERHRLALEKLQARFKDVVECERIVVRSFSHGHEVATFRTPKLSQHMRALLDDAHGSSDKAGDNIRRRDLGDIAGGAKGSIGGPSVGLTGAGETARGGHHGRHASTLSKAEQRKLQRQQRAREWAEHMGRKPDGAHDNPADLALIREAEDNMGDYKLKAAKGYVVPESQRVNAETKRRQLILLREAISEMRGGFNSKLIRLRDEKRSLIAQLAANIGRLREIHAALNLDDSVPDVPRMDPDECPEERAKYDRESLLKWKVERDAKARAAKQHDFGGFGGFGGGGGGGGGGAGGNTGDQQQSGQAAQQQSGQNASQPQGGDYGGSVHASGADGLEDLSDLERQEREVRRIRLTHERKVLLASMKTATGAFDDRVGALRRERVAVEGQVKAAELRQLLLFEELVLLKEFEKRETVLLTKLGAKQNEKSDMGLKVEECRQKLSGKQAEVQVLQAQERAVHTEFIESLGENNKYTDLLSRMFKRKIKRVKKKAQKAEVEGGSDAESDAESDDSDLDDDDLDLDDVSDDLDVEDSCPPGCDKALYDRMLELRERRLDVEEFLQEERKSMDALKKEFEALEKKDKIIDIGLKGVETDIQAFQSEKQKKLNELDVEVTLRLHQIQNLVKGRLPKDLASSLVFTGAGILRLARRIRELQNEKSLQRRQYKELRQLHVKLQKDGKAKEVEIEELEGKARDIQMLKFGRLIDIERLETMSVNKAADDMKDVISSQEVQWIKEEEAREGEISAAKEDLMRTTKENTKLLEHLADLTEERHRLEESLNATEKALGGEYAGPSASDVKERERLKQLVEMQLREIDVLRNEIAILSRKDGQLFPTLRQTTHAPPIDQ* # PASA_UPDATE: g922.t1, single gene model update, valid-1, status:[pasa:asmbl_8781,status:3], valid-1 NODE_66_length_46074_cov_42.1081 . gene 25600 27476 . + . ID=g922;Name=g922.t1 NODE_66_length_46074_cov_42.1081 . mRNA 25600 27476 . + . ID=g922.t1;Parent=g922;Name=g922.t1 NODE_66_length_46074_cov_42.1081 . five_prime_UTR 25600 25699 . + . ID=g922.t1.utr5p1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . exon 25600 25852 . + . ID=g922.t1.exon1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . CDS 25700 25852 . + 0 ID=cds.g922.t1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . exon 25986 26090 . + . ID=g922.t1.exon2;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . CDS 25986 26090 . + 0 ID=cds.g922.t1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . exon 26243 26454 . + . ID=g922.t1.exon3;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . CDS 26243 26454 . + 0 ID=cds.g922.t1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . exon 26824 27476 . + . ID=g922.t1.exon4;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . CDS 26824 27118 . + 1 ID=cds.g922.t1;Parent=g922.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 27119 27476 . + . ID=g922.t1.utr3p1;Parent=g922.t1 #PROT g922.t1 g922 MSGEGQSETHVEDAIGPVDSPKDAVPTVASSQKRKPPRLRRPRPCPIHKLKGRGCEEDCTGRTFFKPSYKPTRREISLIHVSNGTQGAFDMIRLNPELFECGSRLPWTKPTSTIEDINLTSYEGPSDDLRTVAMHVVMLPDSDQFYALFDWVLADPNSMETIEVPLTPIQNGRIVSFHIDTDITSIHVTVTARVPVPNPATKLFETYTCSFSKMCVFPPVEKLPPAPTSQPHHQGDGHDVDDAVDAESPGPADN* # ORIGINAL: g923.t1 original gene structure, not modified by PASA NODE_66_length_46074_cov_42.1081 AUGUSTUS gene 28062 29313 . + . ID=g923;Name=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS mRNA 28062 29313 . + . ID=g923.t1;Parent=g923;Name=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 28062 28112 . + . ID=g923.t1.exon1;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 28062 28112 . + 0 ID=cds.g923.t1;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 28508 28725 . + . ID=g923.t1.exon2;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 28508 28725 . + 0 ID=cds.g923.t1;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 28919 29025 . + . ID=g923.t1.exon3;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 28919 29025 . + 1 ID=cds.g923.t1;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 29177 29313 . + . ID=g923.t1.exon4;Parent=g923.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 29177 29313 . + 2 ID=cds.g923.t1;Parent=g923.t1 #PROT g923.t1 g923 MEATSSTPGDSMPSIETVPVTFVWKATEPPLPLSVSLVIQPAGLVNDDTLTMDAAHRMVQRDEDGAFVVQLHLRPRVYQYMYVLDGALWRYAADQSFTLLGSGRIVNYIEILSRDAAMARDSASKRLTSVFEATPLLMNTTDGRIAQEVIRDRNSRWCCGCCRRGKCDIL* # PASA_UPDATE: g925.t1, single gene model update, valid-1, status:[pasa:asmbl_8782,status:3], valid-1 NODE_66_length_46074_cov_42.1081 . gene 39003 41798 . + . ID=g925;Name=g925.t1 NODE_66_length_46074_cov_42.1081 . mRNA 39003 41798 . + . ID=g925.t1;Parent=g925;Name=g925.t1 NODE_66_length_46074_cov_42.1081 . five_prime_UTR 39003 39081 . + . ID=g925.t1.utr5p1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . exon 39003 39156 . + . ID=g925.t1.exon1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . CDS 39082 39156 . + 0 ID=cds.g925.t1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . exon 39383 40173 . + . ID=g925.t1.exon2;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . CDS 39383 40173 . + 0 ID=cds.g925.t1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . exon 40687 40792 . + . ID=g925.t1.exon3;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . CDS 40687 40792 . + 1 ID=cds.g925.t1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . exon 41068 41182 . + . ID=g925.t1.exon4;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . CDS 41068 41182 . + 0 ID=cds.g925.t1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . exon 41426 41798 . + . ID=g925.t1.exon5;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . CDS 41426 41754 . + 2 ID=cds.g925.t1;Parent=g925.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 41755 41798 . + . ID=g925.t1.utr3p1;Parent=g925.t1 #PROT g925.t1 g925 MANQGKKRRQQTFTLAAFLEDQLNAVKDGKSTSAPVKTVVGLNPSIVSRDARAATAAQKPASQTIGKDAPGKQKHAVNSMDSSAPTRPRGKEREKPKKKKPTLMKKIITAERDVRKAASAARREVDAHAAAQPSGASGAAAGDVDGTAVTVNVDDDAASVIGSPSTLQVDAGHVTAGGSTDIIIDQAESANGVPIVDDVRRDASHGSPDTHSVTRIVTPPAATALALVPASHVAAAVKESAGDVAATSDAKEDCDDADIASADPAVVIAFAPPPIFIAIPGIHTKKFRAYCNQMTSPPLDDLTAAFLRLLLKFQERQKAMDPIKAKAKRRIVVGLREVAKHLKRNKLKCVIVAPDVEEVRSDGGLDDTLLGIIGHCRTACEDDKKGAQLIFSMHRRRLGRVLDVSTPVSIVGVFNYDGAHDQFKEMLVLAEKGRRDYDDAVVRAKTQMRDVTPTKTTVSAQKGGVLVETAP* # ORIGINAL: g919.t1 original gene structure, not modified by PASA NODE_66_length_46074_cov_42.1081 AUGUSTUS gene 12272 13702 . + . ID=g919;Name=g919.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS mRNA 12272 13702 . + . ID=g919.t1;Parent=g919;Name=g919.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 12272 13702 . + . ID=g919.t1.exon1;Parent=g919.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 12272 13702 . + 0 ID=cds.g919.t1;Parent=g919.t1 #PROT g919.t1 g919 MASLSSLPVEVLVARVVPLLNNATKIALSQTNSTLRSHLRRSAVCVYKLTPTWSRLFYEDEGFRSLVTGVIPKRRLEIQFFDVKEGTDLCEASERDKWRNRVVDVSALGGVHTLNLSYCYGVVDVSALGGVHTLDLTYCRGVVCVSALGGVHTLNLAYCQGVVDLSALGGVHTLSLSYCRGVVDVSALGGVHTLNLTCCKRLVDVSALGGVHTLNLSYCAGVVDVSALSGVHTLDVSRCDIVDVSALGGLHTLNLTHCRRLVDVSALRGVHTLNLTYCRGVVDVSALGGVHTLNLSICNKVVDVSALGGVHVLDLSECDGVKDFSALGGVHTLNLSYCDGVVDVSALGGVHTLYLSFCHGVVDVSALSGVHTLNLRGCSGVVDVSALGGVHVLDLSDCNGVVDVSALGGVHTLNLRGCNGVIDVSALGGVHTLNLRGCNGVMDVSALERVHTLNLRGCNGVVDVSALERVHTLLHK* # PASA_UPDATE: g924.t1, single gene model update, valid-1, status:[pasa:asmbl_8786,status:12], valid-1 NODE_66_length_46074_cov_42.1081 . gene 30251 38167 . - . ID=g924;Name=g924.t1 NODE_66_length_46074_cov_42.1081 . mRNA 30251 38167 . - . ID=g924.t1;Parent=g924;Name=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 38001 38167 . - . ID=g924.t1.exon1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 38001 38167 . - 0 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 37749 37850 . - . ID=g924.t1.exon2;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 37749 37850 . - 1 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 37095 37563 . - . ID=g924.t1.exon3;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 37095 37563 . - 1 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 36292 36739 . - . ID=g924.t1.exon4;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 36292 36739 . - 0 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 33602 35889 . - . ID=g924.t1.exon5;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 33602 35889 . - 2 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 32887 33449 . - . ID=g924.t1.exon6;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 32887 33449 . - 0 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 32211 32571 . - . ID=g924.t1.exon7;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 32211 32571 . - 1 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . exon 30251 32044 . - . ID=g924.t1.exon8;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . CDS 30836 32044 . - 0 ID=cds.g924.t1;Parent=g924.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 30251 30835 . - . ID=g924.t1.utr3p1;Parent=g924.t1 #PROT g924.t1 g924 MSILAPRDPSAQESSEMDLPSGARKYIKPIPRLGLAEKRRPGEVLEVCVFISSTFRDMHGERDLITREVFPEINEWAASRKVRLIPVDLRWGLTAEENGDAAHNVLQLCLDEVERCRGWFLALSGERYGWVPKEYSLGNDALYDWISVLPRGEYVLPPSITVLETMFACLNEPDRPTHAFAYFRSPEFVDSIPDEALASQWVRRPDGSETVQRIAARSVFRDPDEDKYRPAIEELRAQLIFHPFCQVTDGYKCQYVPEELSPDGAAKVGGLDELKAIMLNDLRGAIEAEFPVVDVGDGALHSLGAAIREPALVREFLSHFDFAHEHTRTFLGRTIAYDMLMRYARQKKKRRLVADVKTRADGKEESPFVLGMSDTDASADVAHDRPVLITGHSGYGKSALMARLALELIADSKYKCLVVPVFCGHTSASSDPLQLVNYMARVIRAHFNKKMSESSAQAQHTIATAARDFIGLLEEIGSDDILRQMASRLTGKGVNGLARLFRRKMKGKSTVRLVLVIDGLNQMVTSRYHPGEVLAWIPERLPPGIRVIVSCAPGVLSDSLAVRKNPPSLAPVGALKPSEQSQLVKLRFERYHKRLEPAQLRTLLAKSSAGSPLYLTIACEEIRMFGVYEKFDAFIESLPGDIDGIFRQAFARIEHDAGKLLASQIEAALCLIAASRHGLTEEELLELLSPSASLHASYGGVSIASPPPRSLSVEDERTAYTPMRRATAAVDHKLQRKVWASVYHSIRAYIRPPAAGGAGRIEFFHRQVKKAVRRRYMCACELDCRQFRDGQYCRHVNPSAAGKNRADADGVSPQLASQWVMRDAAAHARLASLFAAQGDPSGAGLWDGESATGVSEVLYHATHALDWTFVHSIACNLNYIAARIRHNLGPSLLAEYDMCVSAGNAHDWGGDAEVGLAVNQFARFCRRWIHRMAADPSSLRHLARQCPDDSAVYRAVIGLSGVSGASGVEHLLSDGGSGDSKGKTGSLKWINKPQKENPLLQTFTGHTNRVTCMALDASGNRLLSGDGDYTARVWDFVSGVCISTLTGHLATITWCALLKIGCPITGSRDGTFRVWRADSAVAVVVVDAHTRGDTCFDLSSDERRLVSGGMDGRLCVHMLPMGRLLAEVYVTDAVFTSVVWTDADGTTVAAGTSLGDVHVWDVKTDGGAQVCRRIEWDGCGKGEVTCMRVSADFRWLSACTSRVGVFDIASGCVAWQPLEGHAGKTSDCAFSPDGLRMVTCGVDGIVRLHTAAPPIVKPAREEGTVDDCSDDRSCSDDRIGCSVDEALVSLGMAMEERDVSRDGEEVASLPARFAWSVVTIVAMKQHVNGVTCCVFSPDGSVFATGGPIAVYLGHFARVTNLAFAPTDSSRLVSSSIDETVRLWNADVVPGFESTGTTKGDRTTTEAVWGTDGNTPSRINSIAKRGVRESVDVRPEASHGHLGAVLYCGLLPGGARAVTTGKDFCIKLWCLFTGAEIATLNGHSNWVTCVGASADGTLLASTSFDNTAVLWDAHTNARIVELKDLRAYVYGAVFSPPRDARAASQWLVTWGDEPSIHLYDVEASVGTHEPWSRALCGHTQPVRRCAFSPDGSILASIARAEGARLWNVVTGTCLAVLGTLAVPVQSFSFCPSGNVIVTASKDDVLRVWRVGGDGRWGSAILHVLPGSAAITGIHFSKDGTALVAAYVAQDGSRALAVVDTASLSASFVSSQSHMHGRRGSSVPPLCSIPLTSPAIACGVDVTSNRAVIADEDGAMHVLRLPDTRSSRVSSARLHTASVKDEQPVSRLSVLSVDVVSSLLHASASDHASKVTPHVTGEFDRCAVFYNLWQIDCVASGMRSDGAPVIVAGDVVGSVLIFQVEDPLPVSASP* # PASA_UPDATE: g918.t1, single gene model update, valid-1, status:[pasa:asmbl_8780,status:3], valid-1 NODE_66_length_46074_cov_42.1081 . gene 9839 11836 . + . ID=g918;Name=g918.t1 NODE_66_length_46074_cov_42.1081 . mRNA 9839 11836 . + . ID=g918.t1;Parent=g918;Name=g918.t1 NODE_66_length_46074_cov_42.1081 . five_prime_UTR 9839 9943 . + . ID=g918.t1.utr5p1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . exon 9839 10158 . + . ID=g918.t1.exon1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . CDS 9944 10158 . + 0 ID=cds.g918.t1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . exon 10496 10588 . + . ID=g918.t1.exon2;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . CDS 10496 10588 . + 1 ID=cds.g918.t1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . exon 11035 11200 . + . ID=g918.t1.exon3;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . CDS 11035 11200 . + 1 ID=cds.g918.t1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . exon 11574 11836 . + . ID=g918.t1.exon4;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . CDS 11574 11693 . + 0 ID=cds.g918.t1;Parent=g918.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 11694 11836 . + . ID=g918.t1.utr3p1;Parent=g918.t1 #PROT g918.t1 g918 MSQRRLSIGGSAVATARLSMFYTGTAPAFGLDEPARVRLEKHMEHLHDFSLIVVCRARYRIRLTITVPQLLDVLDIHIGQLGVRIKHDTTKKTGDTMDIDGTWDVHPSVMGTIGDKRDLIPLIIKVDTAVAGTMKKEITLNAQLQAVFNMGTVSQAEKNVGALDGIALRWDVSGTSASSHPTYELLDSHSRTRTISR* # PASA_UPDATE: g926.t1, single gene model update, valid-1, status:[pasa:asmbl_8777,status:3], valid-1 NODE_66_length_46074_cov_42.1081 . gene 42374 45463 . - . ID=g926;Name=g926.t1 NODE_66_length_46074_cov_42.1081 . mRNA 42374 45463 . - . ID=g926.t1;Parent=g926;Name=g926.t1 NODE_66_length_46074_cov_42.1081 . five_prime_UTR 45022 45463 . - . ID=g926.t1.utr5p1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 44922 45463 . - . ID=g926.t1.exon1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 44922 45021 . - 0 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 44716 44757 . - . ID=g926.t1.exon2;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 44716 44757 . - 2 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 44101 44569 . - . ID=g926.t1.exon3;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 44101 44569 . - 2 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 43881 43927 . - . ID=g926.t1.exon4;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 43881 43927 . - 1 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 43642 43699 . - . ID=g926.t1.exon5;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 43642 43699 . - 2 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 43245 43327 . - . ID=g926.t1.exon6;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 43245 43327 . - 1 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 42894 42955 . - . ID=g926.t1.exon7;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 42894 42955 . - 2 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . exon 42374 42629 . - . ID=g926.t1.exon8;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . CDS 42465 42629 . - 0 ID=cds.g926.t1;Parent=g926.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 42374 42464 . - . ID=g926.t1.utr3p1;Parent=g926.t1 #PROT g926.t1 g926 MSTNGHQRRPSIGRSDVRITKKDIGLPSDFRHKVHGDSTALDVVTKGEAPFDPETGSVVVKPSVRPRSASIHDTNGSASRVETPQRSNSARSYVTPTHGSNVATPVLSPRMSPVPRAKPGPLSMSSASASGAQRPMTPTGGAAGGNPHGQAQGAGSTPAHTPTRRISITSAARFLPATSAVDKRPLPRGWEQAMTDDGKTYYIDHKTGTTHWTHPDDKKGLPPGWEKIESPLHAVYYVNHITKTAQYDPPRWSNTPGETKTDVRPIDVPEWLFMYSISPPDTDKIIKWDLFSLPELERFWSMLNRLQRNEMEMAVQRYEQYRALLVSIIEMKTTEEIDRGL* # PASA_UPDATE: g916.t1, single gene model update, valid-1, status:[pasa:asmbl_8778,status:12],[pasa:asmbl_8779,status:12], valid-1 NODE_66_length_46074_cov_42.1081 . gene 1781 3612 . + . ID=g916;Name=g916.t1 NODE_66_length_46074_cov_42.1081 . mRNA 1781 3612 . + . ID=g916.t1;Parent=g916;Name=g916.t1 NODE_66_length_46074_cov_42.1081 . exon 1781 2261 . + . ID=g916.t1.exon1;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . CDS 1781 2261 . + 0 ID=cds.g916.t1;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . exon 2595 2923 . + . ID=g916.t1.exon2;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . CDS 2595 2923 . + 2 ID=cds.g916.t1;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . exon 3198 3268 . + . ID=g916.t1.exon3;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . CDS 3198 3268 . + 0 ID=cds.g916.t1;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . exon 3518 3612 . + . ID=g916.t1.exon4;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . CDS 3518 3596 . + 1 ID=cds.g916.t1;Parent=g916.t1 NODE_66_length_46074_cov_42.1081 . three_prime_UTR 3597 3612 . + . ID=g916.t1.utr3p1;Parent=g916.t1 #PROT g916.t1 g916 MSDVIASLRGNAHVGTANSGSSSGVRYAVGVDPATAPLSTQSQHVTAPAPQKSASSAPPASQTKPSSNGFGGMKKGFFDSKPKAAKASSPGVTSASGGAAVNASAGTKTAWAPSSQPPLAVDDDVIEILTPKAAKDEALRLAEVQEAMKTSVPGMGIGGNEWMNASLMARIAKRPNLAKRLMDPRYAAALGEMQKNPKECVERLKDDPEMDAFIREFAEVMGSHFEVLANEQEEAARKKAEEDARAAEAQRQAALADPNVKKILENAELKALLTDPDVVALIESLRTNPDAAQDALRKGGPAMGAKIKKLVESGLLSVQ* # ORIGINAL: g917.t1 original gene structure, not modified by PASA NODE_66_length_46074_cov_42.1081 AUGUSTUS gene 4245 9125 . - . ID=g917;Name=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS mRNA 4245 9125 . - . ID=g917.t1;Parent=g917;Name=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 9006 9125 . - . ID=g917.t1.exon1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 9006 9125 . - 0 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 8400 8853 . - . ID=g917.t1.exon2;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 8400 8853 . - 0 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 8120 8176 . - . ID=g917.t1.exon3;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 8120 8176 . - 2 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 7811 7895 . - . ID=g917.t1.exon4;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 7811 7895 . - 2 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 7211 7564 . - . ID=g917.t1.exon5;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 7211 7564 . - 1 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 6218 6848 . - . ID=g917.t1.exon6;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 6218 6848 . - 1 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 6066 6112 . - . ID=g917.t1.exon7;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 6066 6112 . - 0 ID=cds.g917.t1;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 4245 5886 . - . ID=g917.t1.exon8;Parent=g917.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 4245 5886 . - 1 ID=cds.g917.t1;Parent=g917.t1 #PROT g917.t1 g917 MMDPGDSEILEEDKDEDYEPTLEELHDYAECLGMELPKDEPLLWIAREGLKASLPPGWKPCRTGENEIYYFNFNTRQSQWDHPCDDYFRTLYQNERRKLQTGAAGGGGGKGPQQSAVLNLKKDASRENLLSPSKSKESLVSKSRDNVLTKDTGKDASAMGKEGPRKGPGGAVITKTNSLGALGPIKAAAASGGVGGSPLKASSGLAGTPMTIQRRNSFGGMSETSERSVRVEDSSDDNNSESEDAMSDRHVTAAPVGRTPQASKSGGGGVTGLKKTTVTSASTGALSKSDSGPIVASSASAQQTERAMQEKDRLERKKIEDDMKAKRDRWREDLEKADAAERDSYKREIEAKKAQFRKQMEADATSEETKAKQSKEQRIKRARDDADKAVKAEEDKVAGENKAKLERARRTAQEDYNRQLAELKATLEKENASATASAKAKAQAVDVAEGEHKATLDKLKADHAKKVEELKGTLQKELDAITADGSSKRRSVEAENERSIVRMREEHGRAVDKEKEALARQRETELSAAQRAMAAEASELEQRIRGLTAEEESLRSRKAALTAEVEEASKRQQSSAPASDAVRSSTSSLLASLEAERDSIARQLKEALASAATANAASDALKTDRNMLERDLAQLRRQLTQYQQELESRAHASSSMSGDVQLTEAAIRASLEREMRAMFDVEKKEIMGRMTADLDRERRMRIQETAELRAALARSGVNAAAVAGESRGVAGSVSGHKRRVGVNETDGGVVGNGLSVEELGGAGPGARDDDGSGTPGSSDEWIQVVDDDSKGGKEKTGGGKKEKSSRAKKDKASKKEKERERERERDKDKDRRKPKKKRVRKEAFGTSSSSASSSPSESSDSDGDASRASSNTHRRRRWLRDRIDEIDHTRHKLHRQRTRIAAQQASLPSNAYGLAAGLLFGEDSESTTDTDAGPGVASLHPAPYRPIFPFSGSAGVGAGPQYTAHDAYVDGIHPHNAPVGGAGAPVYPSSAALAHSHAAAAASRAHAMSAMFPPSRLDVDAYGGRPNHSSTPYVPGDYRRQVLGVSLDSDPRGFNSATRDSDWARASVSFGAGRPSVFAAGRTSSAYQARGLRHPASHGMYGGVRSSFLTPSMGSSQFARREDVRPSAM* # ORIGINAL: g920.t1 original gene structure, not modified by PASA NODE_66_length_46074_cov_42.1081 AUGUSTUS gene 15192 17952 . + . ID=g920;Name=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS mRNA 15192 17952 . + . ID=g920.t1;Parent=g920;Name=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 15192 15224 . + . ID=g920.t1.exon1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 15192 15224 . + 0 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 15571 15707 . + . ID=g920.t1.exon2;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 15571 15707 . + 0 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 15887 15978 . + . ID=g920.t1.exon3;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 15887 15978 . + 1 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 16133 16281 . + . ID=g920.t1.exon4;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 16133 16281 . + 2 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 16481 16624 . + . ID=g920.t1.exon5;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 16481 16624 . + 0 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 16935 17099 . + . ID=g920.t1.exon6;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 16935 17099 . + 0 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 17317 17458 . + . ID=g920.t1.exon7;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 17317 17458 . + 0 ID=cds.g920.t1;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 17741 17952 . + . ID=g920.t1.exon8;Parent=g920.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 17741 17952 . + 2 ID=cds.g920.t1;Parent=g920.t1 #PROT g920.t1 g920 MEAESIARKRKSSSPAALDESTEGGVASPSTSPKPKRPQFGARFLTEGQNVFDYNSWDCVEWNEEQLKQAESVVAKQALVEMAPELKEKYENEAGDFWDKFYGKHENRFFKDRNWLFTEFPELFGSTAAASEAAGSEAPSVRPFRLLEVGCGVGNTVFPILQTNKRDNLFVYACDFANTAIDILKASADYDERRCKAFVCDVTKDDIPIAENSLDCVVMIFVLSAIDPEKMQHVINRLSSLLRPGGVILLRDYGRHDLAQLRFKAGRMIKDNFYVRGDGTRAYFFSNDELDRLLTNAGLVKEVNMADRRLLVNRGRQIQMFRVWMQCRYRKLASPGCLAGGVAALHASAMRSDAASS* # ORIGINAL: g915.t1 original gene structure, not modified by PASA NODE_66_length_46074_cov_42.1081 AUGUSTUS gene 219 335 . + . ID=g915;Name=g915.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS mRNA 219 335 . + . ID=g915.t1;Parent=g915;Name=g915.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS exon 219 335 . + . ID=g915.t1.exon1;Parent=g915.t1 NODE_66_length_46074_cov_42.1081 AUGUSTUS CDS 219 335 . + 0 ID=cds.g915.t1;Parent=g915.t1 #PROT g915.t1 g915 TWTRLTAKDKVEIKRELNEFKRTMDVHDESKHMTRFHV* # ORIGINAL: g390.t1 original gene structure, not modified by PASA NODE_1938_length_8448_cov_40.7943 AUGUSTUS gene 422 628 . + . ID=g390;Name=g390.t1 NODE_1938_length_8448_cov_40.7943 AUGUSTUS mRNA 422 628 . + . ID=g390.t1;Parent=g390;Name=g390.t1 NODE_1938_length_8448_cov_40.7943 AUGUSTUS exon 422 628 . + . ID=g390.t1.exon1;Parent=g390.t1 NODE_1938_length_8448_cov_40.7943 AUGUSTUS CDS 422 628 . + 0 ID=cds.g390.t1;Parent=g390.t1 #PROT g390.t1 g390 YMENSMGASTTLTVPEDQVDSLMHQVADEHGLELNQELSKNMVPSGTASSSVANDELTERLAKLRNQS* # PASA_UPDATE: g391.t1, single gene model update, valid-1, status:[pasa:asmbl_3058,status:3], valid-1 NODE_1938_length_8448_cov_40.7943 . gene 419 5646 . - . ID=g391;Name=g391.t1 NODE_1938_length_8448_cov_40.7943 . mRNA 419 5646 . - . ID=g391.t1;Parent=g391;Name=g391.t1 NODE_1938_length_8448_cov_40.7943 . five_prime_UTR 5534 5646 . - . ID=g391.t1.utr5p1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 5489 5646 . - . ID=g391.t1.exon1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 5489 5533 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 5266 5387 . - . ID=g391.t1.exon2;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 5266 5387 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 4789 4957 . - . ID=g391.t1.exon3;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 4789 4957 . - 1 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 4594 4632 . - . ID=g391.t1.exon4;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 4594 4632 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 4141 4230 . - . ID=g391.t1.exon5;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 4141 4230 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 3798 3893 . - . ID=g391.t1.exon6;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 3798 3893 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 3340 3501 . - . ID=g391.t1.exon7;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 3340 3501 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 2248 3137 . - . ID=g391.t1.exon8;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 2248 3137 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 1881 2035 . - . ID=g391.t1.exon9;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 1881 2035 . - 1 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 1587 1657 . - . ID=g391.t1.exon10;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 1587 1657 . - 2 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . exon 419 1443 . - . ID=g391.t1.exon11;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . CDS 1183 1443 . - 0 ID=cds.g391.t1;Parent=g391.t1 NODE_1938_length_8448_cov_40.7943 . three_prime_UTR 419 1182 . - . ID=g391.t1.utr3p1;Parent=g391.t1 #PROT g391.t1 g391 MAEDTASKHTFTDSEVRAYVDHIADSLGDDEDVKKMLPIEPAQKLFEVVKDGVLMCKLVNKARKETINASKITLNIKNPHQAVENHNLAIAGAKQIGCHVVNIDCTDLMEGKEYLVLGLIWQIIKAKLMGKITLAKHPELVRLVEENEDLQTLLEMSPEQILLRWFNHHLKKAGFAKRITNFSTDIKDSTAYIVLMNQISNGKTDTTALDEPDVTRRAELMLASAEVLGCRKFVTAGDVVAGHPRLNLAFIAGLFNKHPGIALPSEDEFRVLRQQNSSLSDSLARTAAEKKLAEERVDELSKSSVAMSATLKSLTESLEASTSDCLRLRGDLESAHQSNTELKLQLDMEKSRAGTAEESLEATRAALELERSRAGAAEQSVEATRSELEQVRAKAAADASAFAARIAAIEAQLAGEQSARASESAQFSSEKERYDAEIARLLLDIAALKEEIERLRARIHDLEERIRMLEGEKSEIVEMLDQSKRASQLLQDDLSRRISLMEGMASLESKKNDDLNKDLEGHKMKMAKLRDMLDHLQRVAAKSNHYVAQLRMLYNAYSSSKQLCVGLYKNLAADDLEKNAKISGTLKRHGQKEPKPLYFVLKDNFLFVYKPAKKSEPSEILRVDDAMIERTTVPHQHICTIGLVYPEQTLYHVEAETAKELEAWFNALNDAAEFWADNKHKRNRTESHATPHRRESTFG* # PASA_UPDATE: g392.t1, single gene model update, valid-1, status:[pasa:asmbl_3057,status:12], valid-1 NODE_1938_length_8448_cov_40.7943 . gene 6112 8299 . + . ID=g392;Name=g392.t1 NODE_1938_length_8448_cov_40.7943 . mRNA 6112 8299 . + . ID=g392.t1;Parent=g392;Name=g392.t1 NODE_1938_length_8448_cov_40.7943 . five_prime_UTR 6112 6362 . + . ID=g392.t1.utr5p1;Parent=g392.t1 NODE_1938_length_8448_cov_40.7943 . exon 6112 7877 . + . ID=g392.t1.exon1;Parent=g392.t1 NODE_1938_length_8448_cov_40.7943 . CDS 6363 7877 . + 0 ID=cds.g392.t1;Parent=g392.t1 NODE_1938_length_8448_cov_40.7943 . exon 8198 8299 . + . ID=g392.t1.exon2;Parent=g392.t1 NODE_1938_length_8448_cov_40.7943 . CDS 8198 8299 . + 0 ID=cds.g392.t1;Parent=g392.t1;3_prime_partial=true #PROT g392.t1 g392 MAETAALPGLPNERERQNAEFQRRLAEKRAQREVSKKKESSEEEEDDDDDEDDDEEEEEKKEEVKGDDKKASHSKKEESDADNDDDDDDNDDDDADDDDEDEASDGDEDEASVDDKGAKDKEKEESEEGSSDDEEDEPAVKAEETVVKSPAVQPMAAKDRDTEEDEEEDDEDEEEEELVLKPYEAPALSNPTSPQIAPAAARGAAVATAGDWEEEDVDDDDDDEEENAIPAIKPVALSPKMVSSPVVTSPAVARTRSSDLAKALSPALSYFSDRSPASVRAHPLEAKVAAAGSDDDDDDDEDDDMYGAPSLPAAASKPSVKPPSPNAHSHARFSEVVLEEGKKTPLRETPRHSISRPLTPYKKRATDAAIKIQSMYRGHVARKEYQNMRNAAFKAHHPPPPQHQQHAAHPPPERLDSEADFPSDEDSDSDDVPIRPAHNEEADDFELEPTAESDAVTGRVIQTMALIAEYAPGSLSEIQLERTANMRRSFVERSVSRENGRSSSQLHASDTPPPQQHKISPPSILNTSAPDAAIADSEE # PASA_UPDATE: g3993.t1, single gene model update, valid-1, status:[pasa:asmbl_2628,status:12], valid-1 NODE_1790_length_9244_cov_42.4022 . gene 142 2371 . - . ID=g3993;Name=g3993.t1 NODE_1790_length_9244_cov_42.4022 . mRNA 142 2371 . - . ID=g3993.t1;Parent=g3993;Name=g3993.t1 NODE_1790_length_9244_cov_42.4022 . five_prime_UTR 2137 2371 . - . ID=g3993.t1.utr5p1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 2087 2371 . - . ID=g3993.t1.exon1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 2087 2136 . - 0 ID=cds.g3993.t1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 1610 1997 . - . ID=g3993.t1.exon2;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 1610 1997 . - 1 ID=cds.g3993.t1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 1199 1275 . - . ID=g3993.t1.exon3;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 1199 1275 . - 0 ID=cds.g3993.t1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 998 1035 . - . ID=g3993.t1.exon4;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 998 1035 . - 1 ID=cds.g3993.t1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 728 804 . - . ID=g3993.t1.exon5;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 728 804 . - 2 ID=cds.g3993.t1;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . exon 142 258 . - . ID=g3993.t1.exon6;Parent=g3993.t1 NODE_1790_length_9244_cov_42.4022 . CDS 142 258 . - 0 ID=cds.g3993.t1;Parent=g3993.t1 #PROT g3993.t1 g3993 MASSPIAITRVSTPQKRLRTHSANATSPLVHSHSFSGGMSGDFGQMSSRESIVVAVRVRPVPSAPPMQSNSNAFQPIVYTQSPVPLRARIASFSSQSSDSVSATTVSLESERCIKTDDGGVIGIEMNGSREKSYTFDYVAGEQSSQADVFHNVAQDVVSRCLDGYNGSIFVYGQTGSGKTHTMFGTTEEEGIVPRSINLIFEQIGKARMAEGHENMHVTCHLSMLEIYNECIYDLLGDANQKLDIHLA* # PASA_UPDATE: g3994.t1, single gene model update, valid-1, status:[pasa:asmbl_2629,status:3], valid-1 # PASA_UPDATE: g3994.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2630,status:12], valid-1 NODE_1790_length_9244_cov_42.4022 . gene 2811 5047 . - . ID=g3994;Name=g3994.t1 NODE_1790_length_9244_cov_42.4022 . mRNA 2811 5047 . - . ID=g3994.t1;Parent=g3994;Name=g3994.t1 NODE_1790_length_9244_cov_42.4022 . five_prime_UTR 5017 5047 . - . ID=g3994.t1.utr5p1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . exon 4273 5047 . - . ID=g3994.t1.exon1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . CDS 4273 5016 . - 0 ID=cds.g3994.t1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . exon 3956 4018 . - . ID=g3994.t1.exon2;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . CDS 3956 4018 . - 0 ID=cds.g3994.t1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . exon 2811 3768 . - . ID=g3994.t1.exon3;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . CDS 3574 3768 . - 0 ID=cds.g3994.t1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . three_prime_UTR 2811 3573 . - . ID=g3994.t1.utr3p1;Parent=g3994.t1 NODE_1790_length_9244_cov_42.4022 . mRNA 2811 5047 . - . ID=g3994.t1.1.5b6be70a;Parent=g3994;Name=g3994.t1 NODE_1790_length_9244_cov_42.4022 . five_prime_UTR 5017 5047 . - . ID=g3994.t1.1.5b6be70a.utr5p1;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . exon 4273 5047 . - . ID=g3994.t1.1.5b6be70a.exon1;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . CDS 4273 5016 . - 0 ID=cds.g3994.t1.1.5b6be70a;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . exon 3956 4018 . - . ID=g3994.t1.1.5b6be70a.exon2;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . CDS 3956 4018 . - 0 ID=cds.g3994.t1.1.5b6be70a;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . exon 3578 3768 . - . ID=g3994.t1.1.5b6be70a.exon3;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . CDS 3578 3768 . - 0 ID=cds.g3994.t1.1.5b6be70a;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . exon 2811 3428 . - . ID=g3994.t1.1.5b6be70a.exon4;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . CDS 3107 3428 . - 1 ID=cds.g3994.t1.1.5b6be70a;Parent=g3994.t1.1.5b6be70a NODE_1790_length_9244_cov_42.4022 . three_prime_UTR 2811 3106 . - . ID=g3994.t1.1.5b6be70a.utr3p1;Parent=g3994.t1.1.5b6be70a #PROT g3994.t1 g3994 MAAVLATRASPRSPRKANDASEDPLRSGHKLQPSTPDIDVVSTSVDDSPRKSRRNIFEVPTNVDNKPNTPTKLRSARLNAKVVVAESRSATMRAVASIKNEVKEESGMDESAHTATAAPPQQSAIKWERRKSAQASGPTVPARRGKSAVKAEPIDASVADAPQTTSTAGTVGSKVVRGVRPRSQCSLGAPDSGRDTPAKKTSRQTPGKSTPKRVARAPGAAKGSTKQTTITEHFPARKSGRQCQSKVEQDRLKHIQISLIKGKDSNNLEIFDTAEKGKGVRASASFGKGDYVCEYSGDLVTKQEAERREKEYARDPSIGCYMFYFSHRGTTYW* #PROT g3994.t1.1.5b6be70a g3994 MAAVLATRASPRSPRKANDASEDPLRSGHKLQPSTPDIDVVSTSVDDSPRKSRRNIFEVPTNVDNKPNTPTKLRSARLNAKVVVAESRSATMRAVASIKNEVKEESGMDESAHTATAAPPQQSAIKWERRKSAQASGPTVPARRGKSAVKAEPIDASVADAPQTTSTAGTVGSKVVRGVRPRSQCSLGAPDSGRDTPAKKTSRQTPGKSTPKRVARAPGAAKGSTKQTTITEHFPARKSGRQCQSKVEQDRLKHIQISLIKGKDSNNLEIFDTAEKGKGVRASASFGKGDYVCEYSGDLVTKQEAERREKEYARDPSIGCYMFYFSHRGTTYCVDATFAPRLGRLINHSRTCANLAPRIVTTNDANAADSTQTKKERTPSGVKDEGLSVNDSDAVPRIGDGRPHIILVAGRDIRAGEELAYDYGDRSKESLLSHPWLAK* # PASA_UPDATE: g3995.t1, single gene model update, valid-1, status:[pasa:asmbl_2633,status:3], valid-1 NODE_1790_length_9244_cov_42.4022 . gene 5455 8067 . + . ID=g3995;Name=g3995.t1 NODE_1790_length_9244_cov_42.4022 . mRNA 5455 8067 . + . ID=g3995.t1;Parent=g3995;Name=g3995.t1 NODE_1790_length_9244_cov_42.4022 . five_prime_UTR 5455 5902 . + . ID=g3995.t1.utr5p1;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . exon 5455 6688 . + . ID=g3995.t1.exon1;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . CDS 5903 6688 . + 0 ID=cds.g3995.t1;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . exon 6883 7187 . + . ID=g3995.t1.exon2;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . CDS 6883 7187 . + 0 ID=cds.g3995.t1;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . exon 7470 8067 . + . ID=g3995.t1.exon3;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . CDS 7470 7725 . + 1 ID=cds.g3995.t1;Parent=g3995.t1 NODE_1790_length_9244_cov_42.4022 . three_prime_UTR 7726 8067 . + . ID=g3995.t1.utr3p1;Parent=g3995.t1 #PROT g3995.t1 g3995 MTTPAASSGATATPASDPSRWMEQNASILRGKTPLQIAFPGSHNAATYSFDLRNRVDPSGLGCIRFTYIDRATCYILNLSGFVRRWAENQLASMRDQLQAGCRYIDLDVCKLMGDRYSGDASFYTAHSVCAVRVTDVIEEILAFVASHAGEIVVVNLVTQCDRFRTEPEVTIEFAALVKRQFGDAVHPAALAMKTTYENILASGKRLLLLSSNDALVEASGGLIGSANVIAGTFVDTDDLATKQAGLYQQLQQYEPDNDSYQLSYTLTAQESDIRNDAILRYVFCCLGPCRRNRGNMALADEINPTLTTFVNGLTAEMRGKIGYITVDDFVNTDNVQAAIALNTERASAPSASGAGVANGASPSEQQSVPPNTSASTFNVEAGPSSVDASSSEQQSVLPDTSAITFTAEAGPSSVDAMIITQQPTATSVTPPPVGPIVTLSTISMSTV* # ORIGINAL: g8814.t1 original gene structure, not modified by PASA NODE_3823_length_2679_cov_38.4666 AUGUSTUS gene 905 2413 . - . ID=g8814;Name=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS mRNA 905 2413 . - . ID=g8814.t1;Parent=g8814;Name=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS exon 2156 2413 . - . ID=g8814.t1.exon1;Parent=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS CDS 2156 2413 . - 0 ID=cds.g8814.t1;Parent=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS exon 1429 1770 . - . ID=g8814.t1.exon2;Parent=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS CDS 1429 1770 . - 0 ID=cds.g8814.t1;Parent=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS exon 905 1039 . - . ID=g8814.t1.exon3;Parent=g8814.t1 NODE_3823_length_2679_cov_38.4666 AUGUSTUS CDS 905 1039 . - 0 ID=cds.g8814.t1;Parent=g8814.t1 #PROT g8814.t1 g8814 MTTLRTGGDALKQGNRAQPPAKNGKVGVPSAASSEIVSNIPPFGNEWGLTGAERESASATANALVYGDIAPGIARMSTDRRPDAEKIESRLMAMASLDGQLRTSIRRCDALRRELARLFESVHRKYGHLRSPSLSLREVGPLAEADGTVGAYCAPTVSEAMLLSDAKRMKKAVAAMSKTEGTLAAVRDNRLYARAFFAWMNSVAAEAIGSSDSDAAHSPASPTAMHASPPRVPERVPTKSVDDM* # PASA_UPDATE: g7509.t1, single gene model update, valid-1, status:[pasa:asmbl_6783,status:12], valid-1 NODE_3971_length_2425_cov_133.345 . gene 395 2275 . - . ID=g7509;Name=g7509.t1 NODE_3971_length_2425_cov_133.345 . mRNA 395 2275 . - . ID=g7509.t1;Parent=g7509;Name=g7509.t1 NODE_3971_length_2425_cov_133.345 . five_prime_UTR 2232 2275 . - . ID=g7509.t1.utr5p1;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . five_prime_UTR 1997 2010 . - . ID=g7509.t1.utr5p2;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . exon 2232 2275 . - . ID=g7509.t1.exon1;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . exon 1880 2010 . - . ID=g7509.t1.exon2;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . CDS 1880 1996 . - 0 ID=cds.g7509.t1;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . exon 1561 1787 . - . ID=g7509.t1.exon3;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . CDS 1561 1787 . - 0 ID=cds.g7509.t1;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . exon 395 1480 . - . ID=g7509.t1.exon4;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . CDS 409 1480 . - 1 ID=cds.g7509.t1;Parent=g7509.t1 NODE_3971_length_2425_cov_133.345 . three_prime_UTR 395 408 . - . ID=g7509.t1.utr3p1;Parent=g7509.t1 #PROT g7509.t1 g7509 MARMRSILTPIAMPRMADVACVLESQLPDKIPCFSRLAVPCESIELFSYPGDGNLLSLAFNFNIAVELFTGSENNRITGVDTFIRNTLLGASAIMKDARLLRNSLKCDRNTSDAVSGSTKANTRPDILLFLGNLLVLKGEEKSHADGLLTAADELTLKFTSLSPIYFGGVPFLLAYALGGEFIQFFSISQEMGALGPPRVVRTPVGGQLNLTRPLDLVNAVSICLNICRLLPALEKLAGQAVVPLGGVLRKGQTTITFQGETVLKKISNFVGGETRWRELCDLYNVAKGATHVVQHASLPTLSRGNTYLVVLLTVGCRALPIGTEGELVRAVCHILDGLAALHAGGFVHCDIRWENIVFVPEYMCGVRGGKYIVIDLECGRRRGFSPEERLRIWDEMTLTSEGRYTAASDVYLVSKLIDVVVTTLRELRQDISANVRNMSQEFASAATSSKFSDATAALEFVRSLFPDVNQ* # ORIGINAL: g7382.t1 original gene structure, not modified by PASA NODE_2091_length_7783_cov_43.7102 AUGUSTUS gene 2882 4087 . - . ID=g7382;Name=g7382.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS mRNA 2882 4087 . - . ID=g7382.t1;Parent=g7382;Name=g7382.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS exon 2882 4087 . - . ID=g7382.t1.exon1;Parent=g7382.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS CDS 2882 4087 . - 0 ID=cds.g7382.t1;Parent=g7382.t1 #PROT g7382.t1 g7382 MPPHNDSSTSSSDDEDDLMIDPAAEAQLRVASKRASQSSSARRGDDSPRTIAKAVIAGTIPLPAQSMLAVTLKPADCPSRIAKFDKLYNFRDVGGIGTTDGKVVRTGLIFRSSRPDHATEGDLNLLSKVHGVRTIIDLRSPDESAARKGAPVALIDRMYKSEVMTVDDGKRRELAQEAVGATSIKRASRGHHGSATDATAADVNTLRRIRVKFLGSNFMKNVVWKSMPWYAKIAFILLVIIDKIFHTHYSKLLAVHFVVKPRGIRGQYRDFLDHCKSEIVVVLRLIADPKVQPVLIHCAHGKDRTGVVLALTLSILGVPETDISLEYGLTETGLGVIQHRVVKEIKSIGLTEEFAHALPDTMRHTLAYVRENYGSVRQYLIEAGFTDEEQEAMRGLCLING* # ORIGINAL: g7383.t1 original gene structure, not modified by PASA NODE_2091_length_7783_cov_43.7102 AUGUSTUS gene 7096 7695 . - . ID=g7383;Name=g7383.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS mRNA 7096 7695 . - . ID=g7383.t1;Parent=g7383;Name=g7383.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS exon 7096 7695 . - . ID=g7383.t1.exon1;Parent=g7383.t1 NODE_2091_length_7783_cov_43.7102 AUGUSTUS CDS 7096 7695 . - 0 ID=cds.g7383.t1;Parent=g7383.t1 #PROT g7383.t1 g7383 MELIIAACGAGFCSTVVVTPVERIKVAMQAQRTAAPDAKPYTGSLNCAMELIKSQGLFRGIFRGFWATMLREVPSYGFYFYSYENVKAYLAPEGNIDNLAQHHLALAGGIAGIMAWLPIYPIDVVKSRIQGQSGGRGSYSGMLDCAVKSYKAEGTGVFFRGLTPTIVRAFPCHAAVFIGYEAVMRLFRHLDNNKLFSVG* # PASA_UPDATE: g2197.t1, single gene model update, valid-1, status:[pasa:asmbl_6459,status:12], valid-1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . gene 287 2509 . - . ID=g2197;Name=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . mRNA 287 2509 . - . ID=g2197.t1;Parent=g2197;Name=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . five_prime_UTR 2493 2509 . - . ID=g2197.t1.utr5p1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . exon 2429 2509 . - . ID=g2197.t1.exon1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . CDS 2429 2492 . - 0 ID=cds.g2197.t1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . exon 1989 2172 . - . ID=g2197.t1.exon2;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . CDS 1989 2172 . - 2 ID=cds.g2197.t1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . exon 1479 1620 . - . ID=g2197.t1.exon3;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . CDS 1479 1620 . - 1 ID=cds.g2197.t1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . exon 932 1294 . - . ID=g2197.t1.exon4;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . CDS 932 1294 . - 0 ID=cds.g2197.t1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . exon 287 702 . - . ID=g2197.t1.exon5;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . CDS 466 702 . - 0 ID=cds.g2197.t1;Parent=g2197.t1 NODE_3727_length_2880_cov_41.4196_potentialcontaminant . three_prime_UTR 287 465 . - . ID=g2197.t1.utr3p1;Parent=g2197.t1 #PROT g2197.t1 g2197 MEYTGGTVYEYESGAIDESFADIWGEALDQLNLNTADDRSKAGDRTYPLCVTNRTATSVRWIQGEDDLEPADSIGLRDMWSPECFDNPPDTTSALFICSFADNGGVHYNSGPSNRAFAVLTDGGDFKYTSIRGIGLQKAMHIFWRTEEHYIHQTTTLTELATGLKQACKDLRTSGEKLFRISVNGSTAWTRGSAVVTSDDCTQLSKTIDLVVMHGSRCKAATEVRSAKVSATTASSISISWKKPDTRFPDATSSSFRVEYLGKVDGKPEFVNAVKKSAKATTHTFTGLAANKTYVIRITPVTNNGALNGPSKILTATTKKGFAAKQIAA* # ORIGINAL: g3933.t1 original gene structure, not modified by PASA NODE_2330_length_6713_cov_36.5857 AUGUSTUS gene 2 875 . + . ID=g3933;Name=g3933.t1 NODE_2330_length_6713_cov_36.5857 AUGUSTUS mRNA 2 875 . + . ID=g3933.t1;Parent=g3933;Name=g3933.t1 NODE_2330_length_6713_cov_36.5857 AUGUSTUS exon 2 65 . + . ID=g3933.t1.exon1;Parent=g3933.t1 NODE_2330_length_6713_cov_36.5857 AUGUSTUS CDS 2 65 . + 2 ID=cds.g3933.t1;Parent=g3933.t1 NODE_2330_length_6713_cov_36.5857 AUGUSTUS exon 254 875 . + . ID=g3933.t1.exon2;Parent=g3933.t1 NODE_2330_length_6713_cov_36.5857 AUGUSTUS CDS 254 875 . + 1 ID=cds.g3933.t1;Parent=g3933.t1 #PROT g3933.t1 g3933 PTAVQGLMRCLPQTHNYVHNRFAVWDEVTTDAVLQHDDDILIPLHEMEAGFKIWRKHSDQLLGFEPRVVRCVMGNSANCSYSFIMRDGYYDVVIGKLFFVSNKYQRAFMAREDLITLTSRVPCEDLAMNYMVAEMAGNPALWFKANLTEVRSVHYEGLSQGIESAIWRNLRRDCINELYRAFGRHTVIPSTVRYAFSRDTSRVLKQSVVRNESWCSDTHGGRICRQP* # PASA_UPDATE: g3934.t1, single gene model update, valid-1, status:[pasa:asmbl_4058,status:3], valid-1 NODE_2330_length_6713_cov_36.5857 . gene 1544 5720 . + . ID=g3934;Name=g3934.t1 NODE_2330_length_6713_cov_36.5857 . mRNA 1544 5720 . + . ID=g3934.t1;Parent=g3934;Name=g3934.t1 NODE_2330_length_6713_cov_36.5857 . five_prime_UTR 1544 1652 . + . ID=g3934.t1.utr5p1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 1544 1722 . + . ID=g3934.t1.exon1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 1653 1722 . + 0 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 1918 2003 . + . ID=g3934.t1.exon2;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 1918 2003 . + 2 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 2289 2456 . + . ID=g3934.t1.exon3;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 2289 2456 . + 0 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 2745 2828 . + . ID=g3934.t1.exon4;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 2745 2828 . + 0 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 2943 3210 . + . ID=g3934.t1.exon5;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 2943 3210 . + 0 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 3553 3753 . + . ID=g3934.t1.exon6;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 3553 3753 . + 2 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 3958 4219 . + . ID=g3934.t1.exon7;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 3958 4219 . + 2 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 4452 4608 . + . ID=g3934.t1.exon8;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 4452 4608 . + 1 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 4840 5003 . + . ID=g3934.t1.exon9;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 4840 5003 . + 0 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . exon 5225 5720 . + . ID=g3934.t1.exon10;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . CDS 5225 5438 . + 1 ID=cds.g3934.t1;Parent=g3934.t1 NODE_2330_length_6713_cov_36.5857 . three_prime_UTR 5439 5720 . + . ID=g3934.t1.utr3p1;Parent=g3934.t1 #PROT g3934.t1 g3934 MSGNSTLTVDGQRTSGQNIRTQNVMAAMAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLDVEHPAAKVLCELAGLQDQEVGDGTTSVVIMAAELLKNADELVKNKIHPTSIIGGYRLACKEAVKYIQEHLTIKTDDLGRDSIVNAARTSMSSKIIGVEADFFANLVVDALEAVKRTNSKGERKYPVNAVNVLKAHGASAKESILVKGYALNCTVASQAMPKKIQNAKIACLDLNLMKARMHLGVNVLVDDPEKLDAIRKREADITKERVQKILATGANVILTTKGIDDLCLKYFVEAGALAVRRCRKEDIKRIARATGATVVLTLANMEGEESFDASMLGLADEVAVERICDDELILIKGCKAHESSSIILRGANDFMCDEMERAVHDALCVVRGCLESKTVVPGGGAVEAALSIYLELYAQTMGSREQLAIAEFAHSLLVIPKTLAVNAAKDSSDLVAKLRAYHNTAQVDPTKAELKWTGLDLVEGILRDSVKAGVLEPGLSKVKSIKFATEAAITILRIDDMIKLTQQNRNDPNSYQNAMQSGQLNG* # ORIGINAL: g234.t1 original gene structure, not modified by PASA NODE_2111_length_7673_cov_33.9083 AUGUSTUS gene 44 139 . + . ID=g234;Name=g234.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS mRNA 44 139 . + . ID=g234.t1;Parent=g234;Name=g234.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS exon 44 139 . + . ID=g234.t1.exon1;Parent=g234.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS CDS 44 139 . + 0 ID=cds.g234.t1;Parent=g234.t1 #PROT g234.t1 g234 HQRQQQQQQQHQHQQQQQQQQQQKLQQQQQQ* # PASA_UPDATE: g236.t1, single gene model update, valid-1, status:[pasa:asmbl_3550,status:3], valid-1 NODE_2111_length_7673_cov_33.9083 . gene 3651 6903 . - . ID=g236;Name=g236.t1 NODE_2111_length_7673_cov_33.9083 . mRNA 3651 6903 . - . ID=g236.t1;Parent=g236;Name=g236.t1 NODE_2111_length_7673_cov_33.9083 . five_prime_UTR 6712 6903 . - . ID=g236.t1.utr5p1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 6592 6903 . - . ID=g236.t1.exon1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 6592 6711 . - 0 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 6353 6426 . - . ID=g236.t1.exon2;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 6353 6426 . - 0 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 5975 6101 . - . ID=g236.t1.exon3;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 5975 6101 . - 1 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 5581 5751 . - . ID=g236.t1.exon4;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 5581 5751 . - 0 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 5156 5319 . - . ID=g236.t1.exon5;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 5156 5319 . - 0 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 4817 4958 . - . ID=g236.t1.exon6;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 4817 4958 . - 1 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . exon 3651 4610 . - . ID=g236.t1.exon7;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . CDS 4518 4610 . - 0 ID=cds.g236.t1;Parent=g236.t1 NODE_2111_length_7673_cov_33.9083 . three_prime_UTR 3651 4517 . - . ID=g236.t1.utr3p1;Parent=g236.t1 #PROT g236.t1 g236 MENYTKAEKIGEGTYGVVYKARDKQTGEYVALKKIRLEVEDEGVPSTAIREISLLKELRNPNVVGLLDVIHQDDKLYLVFEFLDHDLKGYMDITKKRSGGMDRMLIKSYLYQLLRGMAFCHSRRVLHRDLKPQNLLIDRHGFIKLADFGLARAFSIPLRNYTHEVVTLWYRAPEILLGERHYATPIDIWSIGCIFAEMVRNQPLLPGDSEIDQLYRIFRQFGTPNDSVWPGVSSLPDFKSSFPNWPAQPISKVVPELEPSGQDLLVQMLHYDPKRRISAKQAMSHPYFEDLDISEI* # ORIGINAL: g235.t1 original gene structure, not modified by PASA NODE_2111_length_7673_cov_33.9083 AUGUSTUS gene 161 2191 . - . ID=g235;Name=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS mRNA 161 2191 . - . ID=g235.t1;Parent=g235;Name=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS exon 2124 2191 . - . ID=g235.t1.exon1;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS CDS 2124 2191 . - 0 ID=cds.g235.t1;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS exon 1508 1802 . - . ID=g235.t1.exon2;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS CDS 1508 1802 . - 1 ID=cds.g235.t1;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS exon 746 956 . - . ID=g235.t1.exon3;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS CDS 746 956 . - 0 ID=cds.g235.t1;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS exon 161 441 . - . ID=g235.t1.exon4;Parent=g235.t1 NODE_2111_length_7673_cov_33.9083 AUGUSTUS CDS 161 441 . - 2 ID=cds.g235.t1;Parent=g235.t1 #PROT g235.t1 g235 MFPLSFLSAMDAKSLGVACERITFHIIFAHSYGYGPTVLALAAQYTNVSFVHTAGDVQRPNVATLFVRMYQARYLSGIVAGNMTRANSICYVAAMKIPEASGFDSDASISAYVMPAVRVFAVYRGLNAFSVGVNRANPDATVHVIWTGTWYDPEKERAAAQSAFNSTCCDVIAQHQDTAEAMKVAVKRGKFGIGYHSRIRALLGENILTSAVWNWGPLFYALVQQRLNGTWVPYQNIWPGFDQGRYADLEKLSFAVPSDVSDRIDRELTRLSASRANDDIFCGG* # PASA_UPDATE: g12435.t1, single gene model update, valid-1, status:[pasa:asmbl_6057,status:3], valid-1 NODE_342_length_26414_cov_43.0697 . gene 11262 12134 . - . ID=g12435;Name=g12435.t1 NODE_342_length_26414_cov_43.0697 . mRNA 11262 12134 . - . ID=g12435.t1;Parent=g12435;Name=g12435.t1 NODE_342_length_26414_cov_43.0697 . five_prime_UTR 12074 12134 . - . ID=g12435.t1.utr5p1;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . exon 12023 12134 . - . ID=g12435.t1.exon1;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . CDS 12023 12073 . - 0 ID=cds.g12435.t1;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . exon 11497 11871 . - . ID=g12435.t1.exon2;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . CDS 11497 11871 . - 0 ID=cds.g12435.t1;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . exon 11262 11347 . - . ID=g12435.t1.exon3;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . CDS 11291 11347 . - 0 ID=cds.g12435.t1;Parent=g12435.t1 NODE_342_length_26414_cov_43.0697 . three_prime_UTR 11262 11290 . - . ID=g12435.t1.utr3p1;Parent=g12435.t1 #PROT g12435.t1 g12435 MASVSGFRFHHTMLRVKDPVKSLDFYTRHMGMKLVGQRDFPDMKFSLYFLAHTNETCPEGIDVFEWLFSRDIHHLELTHNHGTESDNSTYHNGNSDPRGFGHIAFRVEDLYKACDALEKDGVNVRRKPGPMGGSINHIAFVEDPDKYWVELIQDVRWGKQ* # PASA_UPDATE: g12436.t1, single gene model update, valid-1, status:[pasa:asmbl_6060,status:3], valid-1 NODE_342_length_26414_cov_43.0697 . gene 12387 19302 . + . ID=g12436;Name=g12436.t1 NODE_342_length_26414_cov_43.0697 . mRNA 12387 19302 . + . ID=g12436.t1;Parent=g12436;Name=g12436.t1 NODE_342_length_26414_cov_43.0697 . five_prime_UTR 12387 12535 . + . ID=g12436.t1.utr5p1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 12387 12541 . + . ID=g12436.t1.exon1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 12536 12541 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 12672 12761 . + . ID=g12436.t1.exon2;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 12672 12761 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 12932 13120 . + . ID=g12436.t1.exon3;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 12932 13120 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 13255 13362 . + . ID=g12436.t1.exon4;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 13255 13362 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 13628 13724 . + . ID=g12436.t1.exon5;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 13628 13724 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 14140 14221 . + . ID=g12436.t1.exon6;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 14140 14221 . + 2 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 14427 14505 . + . ID=g12436.t1.exon7;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 14427 14505 . + 1 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 14819 15080 . + . ID=g12436.t1.exon8;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 14819 15080 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 15469 15590 . + . ID=g12436.t1.exon9;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 15469 15590 . + 2 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 15779 16453 . + . ID=g12436.t1.exon10;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 15779 16453 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 16625 16742 . + . ID=g12436.t1.exon11;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 16625 16742 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 16974 17275 . + . ID=g12436.t1.exon12;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 16974 17275 . + 2 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 17539 17761 . + . ID=g12436.t1.exon13;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 17539 17761 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 18039 18763 . + . ID=g12436.t1.exon14;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 18039 18763 . + 2 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . exon 18960 19302 . + . ID=g12436.t1.exon15;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . CDS 18960 19217 . + 0 ID=cds.g12436.t1;Parent=g12436.t1 NODE_342_length_26414_cov_43.0697 . three_prime_UTR 19218 19302 . + . ID=g12436.t1.utr3p1;Parent=g12436.t1 #PROT g12436.t1 g12436 MTSKDNEARRQIVFELLETERNYVNNLSVVMQFFLYPLNNMIARNERILNEKQVSMIFSNIEAIYKVNRKLLSSLEERIARWSPSQTIGDVFLLHAESLRKYGPFITAKDNSLERLREYEKTNPNFRNFLQLAHQRKECHKQELSDLLIQPVQRIPRYILLLKELSKRTPVIHPDSVRLDEAIAKMSEITQHLNDTKKQTDESLELFAVFDSIQKFPPELIAAHRRHVITIDVMQQATEKDQLTQPKPVGLILFSDVIVFAKIIATGPMAAVRSLMSGPTKARYRFIEKAPINTIRLIDAPDIQEFRNVFAISIGDEALRIYAAQSSSDKARFVALVEKAGGLIGDREEQTAADRAEQAGEFATAVRRTSSWDRFGQKLKATGTRLNRPGSLMALTPKKVFGLGRTGSGKVRRGEMSSSNVSEESDVDGAAADVRARRKHFVESHSLSAVSDDQPPPASIDAFRRASDSDVPPMARGGSFVSHIGPISEEVAHARAQVEDSASVASRSSAQDTDDSASGRVLGQQQTSSMSSLHTLSAGERAERRRSRRSTMHGRRSITYPGRQSQFDTSTVQDILEQVSSKRRSLLPPQAAPQDDGPQSQDPTNTLPHGDVPKDRLSLSRSPSHARQIGSGTTPTRGPADANGGLVDAAAGLAEAAAARDDTTARIARELHELSELRESQVRALIEGFQDSVVAERSGRPSSSGGALEKPPARGENAGGENGENRNISIGDINRRLSSLLLDGWTAINSTSSASPDRIAQLAQADHKGETRTSPRKRRVGRKRYLRNWPDSKGITSGESTADTEEGEVAPPEPRALSTGGKQAHAQRRSGSAGWTERRSASALALGDKGRRLSADFAAELALHSPSHGSVGNGAPVTLASHTPLTPGSAGGATPGSAARRSRGRASGGESKRSISHSFTLSSKTPSVAEVDAREYEQRALKSIGEFSAVARAERGFPGADSNMRRRSGETEASQQQQQQQLRRSPSRTSSSASLTLTQRRSIGDMVHELEAETSSIKAERDALRREREEVEATLDAVRQEWQESLRREKELSDFNLLLSKQLYAALSSRAGDEELRRLVDGVMREVTELRATIASTAPAPPSFDTYETRI* # ORIGINAL: g12438.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 22321 26414 . + . ID=g12438;Name=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 22321 26414 . + . ID=g12438.t1;Parent=g12438;Name=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 22321 22452 . + . ID=g12438.t1.exon1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 22321 22452 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 22586 22963 . + . ID=g12438.t1.exon2;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 22586 22963 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 23079 23273 . + . ID=g12438.t1.exon3;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 23079 23273 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 23412 23513 . + . ID=g12438.t1.exon4;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 23412 23513 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 23714 23905 . + . ID=g12438.t1.exon5;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 23714 23905 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 24064 24111 . + . ID=g12438.t1.exon6;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 24064 24111 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 24323 26414 . + . ID=g12438.t1.exon7;Parent=g12438.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 24323 26414 . + 0 ID=cds.g12438.t1;Parent=g12438.t1 #PROT g12438.t1 g12438 MVDAGDDYRNGAGNGAQSDAGLSHTSKLRRGIKARGSKPYDRPKTLLSKVKDIVSSTIPWNWFGYGVGQEGHQKEENGETEANDDDGDAAMRDDSEVSVTISLSAAPREDPVAHVQAPPQSQQRRAPPAPSVRESAVDAELRRRQQAHAYAVPLERLEYTGTIDPTRFRLAIGGDERRSVAAGDKGKGRADDDAVAAQALLPSHPQPPQHQQQPHMASTPRAPAFSTDAFLSPSRLPVRSPFAPRLDQSSFYAGRTSYGGAASIPAASQVSRKRRMSPSPPPEAGQEGVPNSHGPKRRVIESDGAVRMGTSAFASETAKRIMETLEKISTPVADARRMPPLSVSSPFSDTSQSTGHAVSIVPTRSLSSHQQPILSLRLRTGAKRGREDDDESESQLRDNTVAKPIQGASKKDVTPALWVAPQSNADQRDVGKVRKGKSAREAANPLGAPSSKRRRDAEEDEPEDGVADSAWRQELSSVAPISMTKAPVFKFSTASQPPSVPNGTSSTPPSHTAALPVVSAPNPFAKFGQSATGSWDCDVCMVSNKAGSAACAACGTANPKAKSADAAKPNEPAKPTFSFGVPATTEKKDEPAKPTFSFGVPATTEKKDESAKSTFSFAVPATTEKKDEPAAKPALSFGVPATTEKKDESAKPTFSFGVPATTEKKDESAAKPALSFGVPATTEKKDESAKSTFSFGVPATTEKKDESAKPALSFGVPATTEKKDESAKHTFSFGAAAATTEKKDAPSKVGFGFPKAAAGSWACTVCDVTNKPDLSVCVACGTNKPAAAKAFGSVKDDEKKDGKDVEKPAPASATFGKFGQPAAGSWTCDVCMISNKPEVGSCVACGTANPKAPKSSASAAAKDIQAPKVAFSFGVAPTPTEKKDEPPKSTFSFGVPATTEKKDESAKSTFSFGAPATTEKKDESAKPTFSFGVPATTEKKDESAKPTFSFGVPGTTEKKDESAKSTFSFGVPATTEKKDESAKSTFSFGVPATTEKKDESAKSTFSFGVPATTEKKDESAKTTFSFGVPATTEKKDEPAAKPTFSF # ORIGINAL: g12434.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 9267 10942 . + . ID=g12434;Name=g12434.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 9267 10942 . + . ID=g12434.t1;Parent=g12434;Name=g12434.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 9267 9543 . + . ID=g12434.t1.exon1;Parent=g12434.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 9267 9543 . + 0 ID=cds.g12434.t1;Parent=g12434.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 9729 10942 . + . ID=g12434.t1.exon2;Parent=g12434.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 9729 10942 . + 2 ID=cds.g12434.t1;Parent=g12434.t1 #PROT g12434.t1 g12434 MSLCLLGDVMLARLVTLAITGDKSARTRGLQAEQRKALDRIERDMHFKRMRAWHAGEGDKAGNGIFSEDLWEAMMSCECVLCNFEGAVSDRPFEGDRWNQKHRVHPDCVRAAFGHGGSWCCSLANNHILDDGLSGGKATVDILRSLRVAHAGYGECANQASEPAILSIHVDGVSHSVAVLSYADHFAEWACDEGRPGINYFDFAGCALERGAGGNPNRWRTHFLDRMRRDIAECLVSRGCSMVVVSVHWGDNFVDGDVPESFRSVARELISAGATIVHGHSAHHILGVEIVRCRRRIADPSQQHTGPGDYPPSESSESSGDELDSEERGEADAALSGGIHAHSGSHTDKGGQHQRRRRRYDSGDASDLEGDIVDQGATGLVLYGLGGAIDDYGAAARLMPDADSFAPFAEHRSGIGMACVVQLQHEGGVVSSAHPASRTLVLASATLIALKISDECTTSVAKGDDADWFESRVQDMSADRVTIERGAKEGYFNVVL* # ORIGINAL: g12432.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 4753 5614 . + . ID=g12432;Name=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 4753 5614 . + . ID=g12432.t1;Parent=g12432;Name=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 4753 4760 . + . ID=g12432.t1.exon1;Parent=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 4753 4760 . + 0 ID=cds.g12432.t1;Parent=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 4865 5097 . + . ID=g12432.t1.exon2;Parent=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 4865 5097 . + 1 ID=cds.g12432.t1;Parent=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 5481 5614 . + . ID=g12432.t1.exon3;Parent=g12432.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 5481 5614 . + 2 ID=cds.g12432.t1;Parent=g12432.t1 #PROT g12432.t1 g12432 MAKSATPHKKAGAPSATKRGNGRVTKPTTATAARTSHAPANNTKTKYEGIPLVDLTNMAARLVERCLFNCRGDQDAIIRIKNYKAALQTFDIKYDKGQQYDIHGMAAELEFPLTLLTWDDCDGL* # ORIGINAL: g12433.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 6069 8775 . + . ID=g12433;Name=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 6069 8775 . + . ID=g12433.t1;Parent=g12433;Name=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 6069 6260 . + . ID=g12433.t1.exon1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 6069 6260 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 6390 6446 . + . ID=g12433.t1.exon2;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 6390 6446 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 6532 6678 . + . ID=g12433.t1.exon3;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 6532 6678 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 6866 6966 . + . ID=g12433.t1.exon4;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 6866 6966 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 7111 7160 . + . ID=g12433.t1.exon5;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 7111 7160 . + 1 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 7302 7584 . + . ID=g12433.t1.exon6;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 7302 7584 . + 2 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 7833 8151 . + . ID=g12433.t1.exon7;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 7833 8151 . + 1 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 8268 8393 . + . ID=g12433.t1.exon8;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 8268 8393 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 8623 8775 . + . ID=g12433.t1.exon9;Parent=g12433.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 8623 8775 . + 0 ID=cds.g12433.t1;Parent=g12433.t1 #PROT g12433.t1 g12433 MAEGLRRAARLKGKTTVRSFRAPSDASADALVCSVCLENIGPERGRLNMCEHIFHVPCITEWSKVTNSCPLCKTYFRVIIHEKLDEDGQYMEFHKTRLMDDRRQRVWYDDEDEANLVDMAWAEDEEAPAHSNIDGSDSEGESSDDYDYEDPFINDDENLDDENLPGDDWREQLQRMMSKPADADHNAEGLPRQTGGRGHHNQGNRQQAHQRGHANNNVGGMFADSEYQGRGVAIARAPPVNRAPSLAVHGAHSGQNRGGTSMPRAAAGEWIDMGFKRPNLQSQSQPPSQEAKYGESSRFFGSQQDPIELTETTPVSQRTAARSRHGSQALSCEVVDLVTPPQPHYQARDTNLYDADADDDVLGCEGVVSPLVTASAPTSGTFEPVYPRRRRLVLETARRLTRPFVDVGAMDEALYDDVTKIATDRYMRIKDAPFPTDASGTENAAAFEEQLMDVITKAYGDHSLALTLERSSQCL* # ORIGINAL: g12431.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 1324 2594 . - . ID=g12431;Name=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 1324 2594 . - . ID=g12431.t1;Parent=g12431;Name=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 2402 2594 . - . ID=g12431.t1.exon1;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 2402 2594 . - 0 ID=cds.g12431.t1;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 2088 2309 . - . ID=g12431.t1.exon2;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 2088 2309 . - 2 ID=cds.g12431.t1;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 1720 1942 . - . ID=g12431.t1.exon3;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 1720 1942 . - 2 ID=cds.g12431.t1;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 1324 1618 . - . ID=g12431.t1.exon4;Parent=g12431.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 1324 1618 . - 1 ID=cds.g12431.t1;Parent=g12431.t1 #PROT g12431.t1 g12431 MGRLQILAQWEVEGDSSVEQVKYMVGVVEGSWAGLTVEENTDRVAEAASSVSKSVKEGPLWLPIITFHLVCLFCILFLSSLAAFPPKVKSRISSGVKEAADGKEYESALDKPKGKRSRSINLMKDKIARRFLNVFKKYMSRRPRNSQRRHATQSPRCRKASPRIHTPIKKRRGGKGVGQARTGIATGSSSDSDSDSDSDANANIGRALLSEFTACARVPSYGDEGAGPSGQAQADSDSTDFGTVEQNDFTDLDEISESDDVASPSSGGLPLAQEKMSSDADAEMTDGDSNNDDEYLKFLNEDVLANVGSH* # ORIGINAL: g12430.t1 original gene structure, not modified by PASA NODE_342_length_26414_cov_43.0697 AUGUSTUS gene 118 876 . - . ID=g12430;Name=g12430.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS mRNA 118 876 . - . ID=g12430.t1;Parent=g12430;Name=g12430.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS exon 118 876 . - . ID=g12430.t1.exon1;Parent=g12430.t1 NODE_342_length_26414_cov_43.0697 AUGUSTUS CDS 118 876 . - 0 ID=cds.g12430.t1;Parent=g12430.t1 #PROT g12430.t1 g12430 MSLFFGGLARQAWRQMHPIGAGQRMLSRVHLHPTILRPITASPPRISRFFHAQPAVLFPRGKRAPRAIANDTTADGEDEEEEIEGGAGSEDAFAGQRYVLRNQLRLRSDNGGENEVPRFEDSTEAGIVPKSGPKRGAVTSNEAIDAEDATFRKDAVRDFATVRQIEDLDKLAIYSNRTKFADHLPENAWDVCEVVEHLLRAKAEKIRVVRIDDQSILADYFIFASGKSARHTMALVKDFGRMVCTPSHIFPT* # PASA_UPDATE: g12437.t1, single gene model update, valid-1, status:[pasa:asmbl_6058,status:12],[pasa:asmbl_6061,status:12], valid-1 NODE_342_length_26414_cov_43.0697 . gene 19362 21469 . - . ID=g12437;Name=g12437.t1 NODE_342_length_26414_cov_43.0697 . mRNA 19362 21469 . - . ID=g12437.t1;Parent=g12437;Name=g12437.t1 NODE_342_length_26414_cov_43.0697 . five_prime_UTR 21417 21469 . - . ID=g12437.t1.utr5p1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . exon 20651 21469 . - . ID=g12437.t1.exon1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . CDS 20651 21416 . - 0 ID=cds.g12437.t1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . exon 20366 20445 . - . ID=g12437.t1.exon2;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . CDS 20366 20445 . - 2 ID=cds.g12437.t1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . exon 19973 20152 . - . ID=g12437.t1.exon3;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . CDS 19973 20152 . - 0 ID=cds.g12437.t1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . exon 19362 19860 . - . ID=g12437.t1.exon4;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . CDS 19612 19860 . - 0 ID=cds.g12437.t1;Parent=g12437.t1 NODE_342_length_26414_cov_43.0697 . three_prime_UTR 19362 19611 . - . ID=g12437.t1.utr3p1;Parent=g12437.t1 #PROT g12437.t1 g12437 MGSDDDSDSGDDSHSSSALSDSDDHSSVTSAVTSSSTAQSTTSATSNAESRHHRHRKADADLEGSSTLLTVSGGNTHKGLQRRQAQGDGGTRTSSPSVLLGQQRAPTLSQYFQETTPQYIPKRKFPESNHDRTRFLIWSHRTTAPPGYMTRSQRAKDQKLDTDGEQILRLRIDARKKAIAQGRQRTAELKDDNITLKNLVERFDADCINSVNGILDRNVKIHGALGILGRNFSLQLDRAKQIAAKDVAEAERLYLEVQAEHDRIKALAEERKEESIDVAAYKNDGYPRLQAQIRDLEKMIEQLKVEQAAQVEELLEDFARDGKAAEAFVDSIQQGIAAKVTEHALDLMDRDTRELAMENMIMRREMAAHKEALAQLESDISAAENANRKIALENRANVDPRRRVLAEMQRDRPSIEHLFDDTVL* # PASA_UPDATE: g13311.t1, single gene model update, valid-1, status:[pasa:asmbl_5994,status:3], valid-1 NODE_339_length_26489_cov_42.2908 . gene 16233 18945 . + . ID=g13311;Name=g13311.t1 NODE_339_length_26489_cov_42.2908 . mRNA 16233 18945 . + . ID=g13311.t1;Parent=g13311;Name=g13311.t1 NODE_339_length_26489_cov_42.2908 . five_prime_UTR 16233 16655 . + . ID=g13311.t1.utr5p1;Parent=g13311.t1 NODE_339_length_26489_cov_42.2908 . exon 16233 18945 . + . ID=g13311.t1.exon1;Parent=g13311.t1 NODE_339_length_26489_cov_42.2908 . CDS 16656 18782 . + 0 ID=cds.g13311.t1;Parent=g13311.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 18783 18945 . + . ID=g13311.t1.utr3p1;Parent=g13311.t1 #PROT g13311.t1 g13311 MQDTLDTTMLTGRIASSQKPCDADLWIIHMHLGLGLDVKKSFSVQPCLQNSDYSAPLRVDKALSQVSPLLTHVHSDSVDECGAPFIVHVSSAANNDYYAHYPQAFWPFCYSTLPIFVSDAAESQDPLQHVPSAVDDCSRTDCAVGVHVGGDQEQHSSLSCSEEPSWCDWSDIDMETIDYDADGLFLGNSLGMSAFTDPPPFHDDDTQSTGTYSYHSSLLASQDQTGEETFHAHDRLEFIHPPAIWSTGTASVGGAATCYAHACVQPRATATCHAEQTATTASVGDGCQHDLTEPVHMQTQGDTAGSLRSAFETTNDGCADASEIYYRAPPRDETTGTGPCVAATPQPMGHGETVERDHNHNACHSTISFGAVSSTAVLQVASAWLGQHGRGVVKCNSLRTTASTYLKAAAHTARQFALIPHTDICSPAENPSPTDNGLKGTTSYGNELPHMRGAFISSAASCANSLTSRPARHDKVTAVLQVAVGGVCSPKQRRKLRGVATITPRGASPAVHGVRSRACVAKRRPSSCSAQSEVTWPTLDSRSVFGHPSASLTLASPADSCLESAKMDNSTGVDTLASIADDCRSASSQSVQTLSCSETGVSNCTVSPADDARRSSPPTTHSSPDSLHGQASSAAASPATVHVSQHSVGSVDASAVAMLIAGASAAGVGGAPRGCNGGLYGYYADDRFAKKVSHREAVVSFLSRSSLN* # PASA_UPDATE: g13307.t1, single gene model update, valid-1, status:[pasa:asmbl_5999,status:12], valid-1 NODE_339_length_26489_cov_42.2908 . gene 5400 7000 . + . ID=g13307;Name=g13307.t1 NODE_339_length_26489_cov_42.2908 . mRNA 5400 7000 . + . ID=g13307.t1;Parent=g13307;Name=g13307.t1 NODE_339_length_26489_cov_42.2908 . five_prime_UTR 5400 5467 . + . ID=g13307.t1.utr5p1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . exon 5400 5493 . + . ID=g13307.t1.exon1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . CDS 5468 5493 . + 0 ID=cds.g13307.t1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . exon 5722 5763 . + . ID=g13307.t1.exon2;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . CDS 5722 5763 . + 1 ID=cds.g13307.t1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . exon 6069 6121 . + . ID=g13307.t1.exon3;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . CDS 6069 6121 . + 1 ID=cds.g13307.t1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . exon 6491 6581 . + . ID=g13307.t1.exon4;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . CDS 6491 6581 . + 2 ID=cds.g13307.t1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . exon 6910 7000 . + . ID=g13307.t1.exon5;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . CDS 6910 6925 . + 1 ID=cds.g13307.t1;Parent=g13307.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 6926 7000 . + . ID=g13307.t1.utr3p1;Parent=g13307.t1 #PROT g13307.t1 g13307 MISDLILFGTLMVNAGAVLNFKLKGPSVKNDTFEQPEPTVGDKVREFLNNLRYFRIFIGLWNLIVIVLMMTIFGS* # PASA_UPDATE: g13309.t1, single gene model update, valid-1, status:[pasa:asmbl_5992,status:12], valid-1 NODE_339_length_26489_cov_42.2908 . gene 11739 13080 . - . ID=g13309;Name=g13309.t1 NODE_339_length_26489_cov_42.2908 . mRNA 11739 13080 . - . ID=g13309.t1;Parent=g13309;Name=g13309.t1 NODE_339_length_26489_cov_42.2908 . exon 11739 13080 . - . ID=g13309.t1.exon1;Parent=g13309.t1 NODE_339_length_26489_cov_42.2908 . CDS 11938 13080 . - 0 ID=cds.g13309.t1;Parent=g13309.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 11739 11937 . - . ID=g13309.t1.utr3p1;Parent=g13309.t1 #PROT g13309.t1 g13309 MPPGNMQQATDAPTSGANNGDLGGAAVKPSAQGRPIDLVELSQDYRPHKPDRDLMRYTLFPHGPQFPTVDEALAVVTPVLADLKKGYNDWGMHNAGQTLQRVFNEMGLSQSDKTNEEWMQMYLDGHLDRYFHQIRVQRPSQGYFVCGLGYDRVRGVVEWVHKKLTGQDCRPAKGAEKKRKRKRDQSHDDVSDAPSNSDDDGDDDDGGEYNGGHRTQRHAANAQPQRTTPRRLATSRHHHPPTDAAASLMDRADSRQGGRGMKRSRVESLSARHKNGGGGSGGHYNGRGLKRQQRKRDEECDSIGTDVQDSEDHDSQPDSDWKDGDDSDDESEAGSEIHSGGGDSKRFVDGMIKKLDAKIRGLTKEVRKLKAIKNSLAVHC* # PASA_UPDATE: g13310.t1, single gene model update, valid-1, status:[pasa:asmbl_5997,status:12], valid-1 NODE_339_length_26489_cov_42.2908 . gene 14355 15017 . - . ID=g13310;Name=g13310.t1 NODE_339_length_26489_cov_42.2908 . mRNA 14355 15017 . - . ID=g13310.t1;Parent=g13310;Name=g13310.t1 NODE_339_length_26489_cov_42.2908 . five_prime_UTR 14815 15017 . - . ID=g13310.t1.utr5p1;Parent=g13310.t1 NODE_339_length_26489_cov_42.2908 . exon 14719 15017 . - . ID=g13310.t1.exon1;Parent=g13310.t1 NODE_339_length_26489_cov_42.2908 . CDS 14719 14814 . - 0 ID=cds.g13310.t1;Parent=g13310.t1 NODE_339_length_26489_cov_42.2908 . exon 14355 14508 . - . ID=g13310.t1.exon2;Parent=g13310.t1 NODE_339_length_26489_cov_42.2908 . CDS 14374 14508 . - 0 ID=cds.g13310.t1;Parent=g13310.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 14355 14373 . - . ID=g13310.t1.utr3p1;Parent=g13310.t1 #PROT g13310.t1 g13310 MPFFPRNGSFAAAGRRPCTRSTAISKPTTFLKCSKVEHGAELDEIFIKTPAGTTASFRSGCPLPCCRWQMCGPIGQ* # ORIGINAL: g13304.t1 original gene structure, not modified by PASA NODE_339_length_26489_cov_42.2908 AUGUSTUS gene 2 454 . + . ID=g13304;Name=g13304.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS mRNA 2 454 . + . ID=g13304.t1;Parent=g13304;Name=g13304.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 2 454 . + . ID=g13304.t1.exon1;Parent=g13304.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 2 454 . + 0 ID=cds.g13304.t1;Parent=g13304.t1 #PROT g13304.t1 g13304 VDLIIAIDAGSDTAQNLPNGKAIVNAAAYASEFARPFPAVPTMAQFNDASNQLLNKTTFFGCGDASVPTVVYIPNRFVTYNAAAMPGTLQLSYEQQQIDELLMNAFATTTGFVNQPTLAKAIGCAVLDAGAQPLPQGCTDIDWTSFCWKK* # PASA_UPDATE: g13306.t1, single gene model update, valid-1, status:[pasa:asmbl_5996,status:12], valid-1 NODE_339_length_26489_cov_42.2908 . gene 3495 5199 . - . ID=g13306;Name=g13306.t1 NODE_339_length_26489_cov_42.2908 . mRNA 3495 5199 . - . ID=g13306.t1;Parent=g13306;Name=g13306.t1 NODE_339_length_26489_cov_42.2908 . five_prime_UTR 5116 5199 . - . ID=g13306.t1.utr5p1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . exon 4936 5199 . - . ID=g13306.t1.exon1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . CDS 4936 5115 . - 0 ID=cds.g13306.t1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . exon 4689 4789 . - . ID=g13306.t1.exon2;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . CDS 4689 4789 . - 0 ID=cds.g13306.t1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . exon 3883 4334 . - . ID=g13306.t1.exon3;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . CDS 3883 4334 . - 1 ID=cds.g13306.t1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . exon 3495 3725 . - . ID=g13306.t1.exon4;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . CDS 3565 3725 . - 2 ID=cds.g13306.t1;Parent=g13306.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 3495 3564 . - . ID=g13306.t1.utr3p1;Parent=g13306.t1 #PROT g13306.t1 g13306 MAAAAAAAAGGSVGLTHSHSNSDKIIRDLSVKLDDLLIAYMNAYDEYNALYSKFSNNVKEGHFFLSKARYTMGYKSVSELQFDPSMKALIKCDIESSSDTPAPESSGRSKKPIVDADHVGNSLSVRVRRLSVDALDGPGPSTIANVHVLAGSGRNEERSHFASSQGQHSAHTQGNTSLRSRRGDEVTGGQSGQQGASGADDIAMADLKGGPKAIGAARVLKDPIKWFGVLVPPTLRTCQSHFREAIDVVPKLAEMRHSMERLRAEYDALLHHKEQLVKAAEAAATQTHPGDAAPAQS* # PASA_UPDATE: g13305.t1, single gene model update, valid-1, status:[pasa:asmbl_5998,status:12], valid-1 NODE_339_length_26489_cov_42.2908 . gene 1082 3373 . + . ID=g13305;Name=g13305.t1 NODE_339_length_26489_cov_42.2908 . mRNA 1082 3373 . + . ID=g13305.t1;Parent=g13305;Name=g13305.t1 NODE_339_length_26489_cov_42.2908 . five_prime_UTR 1082 1120 . + . ID=g13305.t1.utr5p1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 1082 1123 . + . ID=g13305.t1.exon1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 1121 1123 . + 0 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 1491 1568 . + . ID=g13305.t1.exon2;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 1491 1568 . + 0 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 1835 2015 . + . ID=g13305.t1.exon3;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 1835 2015 . + 0 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 2213 2310 . + . ID=g13305.t1.exon4;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 2213 2310 . + 2 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 2604 2775 . + . ID=g13305.t1.exon5;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 2604 2775 . + 0 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . exon 2933 3373 . + . ID=g13305.t1.exon6;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . CDS 2933 3189 . + 2 ID=cds.g13305.t1;Parent=g13305.t1 NODE_339_length_26489_cov_42.2908 . three_prime_UTR 3190 3373 . + . ID=g13305.t1.utr3p1;Parent=g13305.t1 #PROT g13305.t1 g13305 MARGPKKHLKRLNAPKHWMLDKLTGTWAPRPSTGPHKLRECLPLIVFIRNRLKYALTGQEVKYILKQRLVKVDNKVRTDHTYPAGFMDVVSFEKTNEKFRLLYDIKGRFTVHRIQDEEAKYKLLKVRSVSLAANGVPVIGTHDGRTIRYPDPLIKVNDSVKFNIENGKIEDFLKFETGNLVMITGGRNLGRVGTITSRERHDGGFDIVHVKDSLGHSFATRIGNVFIIGKGNKSIVSLPKGKGVRLTIAEERDRRIAAKASA* # ORIGINAL: g13308.t1 original gene structure, not modified by PASA NODE_339_length_26489_cov_42.2908 AUGUSTUS gene 7167 11380 . - . ID=g13308;Name=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS mRNA 7167 11380 . - . ID=g13308.t1;Parent=g13308;Name=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 11290 11380 . - . ID=g13308.t1.exon1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 11290 11380 . - 0 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 11012 11117 . - . ID=g13308.t1.exon2;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 11012 11117 . - 2 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 10757 10871 . - . ID=g13308.t1.exon3;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 10757 10871 . - 1 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 10348 10484 . - . ID=g13308.t1.exon4;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 10348 10484 . - 0 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 10060 10211 . - . ID=g13308.t1.exon5;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 10060 10211 . - 1 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 8941 9030 . - . ID=g13308.t1.exon6;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 8941 9030 . - 2 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 8517 8606 . - . ID=g13308.t1.exon7;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 8517 8606 . - 2 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 8156 8256 . - . ID=g13308.t1.exon8;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 8156 8256 . - 2 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 7660 7804 . - . ID=g13308.t1.exon9;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 7660 7804 . - 0 ID=cds.g13308.t1;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 7167 7345 . - . ID=g13308.t1.exon10;Parent=g13308.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 7167 7345 . - 2 ID=cds.g13308.t1;Parent=g13308.t1 #PROT g13308.t1 g13308 MARRGFHALTALVALAFLFAIARATYVPVYVMLPLDIVDTKNASQLAYPDKLGTWFTQLKNGNVDGVMVDVWWGVVENGAPQKYNWDAYLQLLELVKSHSLGIQVIMSFHKCGGNTGDACNIPLPQWVASIGSQNPSIYYTDASGKIDDEYLSLGIDDQPVLSGRTAVQVYADFMKSFAQAFSSYFASTIKSVEIGLGPAGTYNDVPSNTGFFSDGGANNYASPYGVFFLSWYSSTLISHGDAILSQAVATFGSLGVKIGAKVAGIHWWYKTAAHAAEVTAGYFNTDSNDAYAKIAAMLNRHGAGFIFTCLEMRDSEQPSSASCGPEELVDQTRKAAQVNGLGYSGENALARYDQTAYDEIVAKSKNNGSNAGFTYLRLCDTLTSEPNWTTFKNFVSQMHA* # ORIGINAL: g13312.t1 original gene structure, not modified by PASA NODE_339_length_26489_cov_42.2908 AUGUSTUS gene 19581 25797 . + . ID=g13312;Name=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS mRNA 19581 25797 . + . ID=g13312.t1;Parent=g13312;Name=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 19581 19651 . + . ID=g13312.t1.exon1;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 19581 19651 . + 0 ID=cds.g13312.t1;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 19845 21875 . + . ID=g13312.t1.exon2;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 19845 21875 . + 1 ID=cds.g13312.t1;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 22115 22691 . + . ID=g13312.t1.exon3;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 22115 22691 . + 1 ID=cds.g13312.t1;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS exon 22876 25797 . + . ID=g13312.t1.exon4;Parent=g13312.t1 NODE_339_length_26489_cov_42.2908 AUGUSTUS CDS 22876 25797 . + 0 ID=cds.g13312.t1;Parent=g13312.t1 #PROT g13312.t1 g13312 MTKLHLRRSSEVEKSIVDVPDIFHPKHGANIVGRQPTCDIFLDNSARQISRKHAIFSYDAGAGKASILDLNSVNGVCVDSICIAQDETPLRIGNVISFGCAPKGAKGVRFERPDCELVYVLEECNCDELTASGRSHVSAGVNPPRVSFDQTLSFYSQHSDSSHAAARTDGPGGKADALSPAIANKRTSSGVNGSLYTPSFAPNRTREVSVHSPRDTGCVVSPAGPTPRANSGGRMPATPNSAPRRTTTHTTAPSSHVQSSYTNIRVNFVEEEEEEDGNERDEIDVDVLASVDMESIGNSPPPVPMETSPAITRKSSRASQSQSQSQSQSQSQSQSQSSDVAFVDETKKITMKKAKSHAAVSPAREKRAQAHHTPSQTQPPVPMESSPAVKRKSSRASQSQSQSSDVVFIDETTKKTRKQAKSPASVSPVREKRAHAHHTPSQTQPPVFTEASPAVKRKSSRASQSQSQSQSQSQSSDVVFIDETAKKTTRQAKSPASVSPAGEKRARARQTSAQTLPQSQTAHAQVPQTQLTQVSEAARQLRLRVAKLLEAPVTKKANKPAEDDPIETSGSEEDEQNINNDRDNGARPGAGAGAAVPGSPEEIVEKCSRALAEVRPLLAAGVATRQYLEDWTRECDRLSGMLKQPATIIAVVGDTGSGKSSLMNALLGQTNILPTSGMRACTAVVVEIEHISKSATPRMAKFEAVIEFLAREEWDAELNVLKAEAFSREGRLRAQADDAETESARRKIEAVYGKRIRHIDELNEDNEITRQLGKKLTVRSNKPADFRRQLDRYIDSTTNDTAKRKGKNAPVAVFTKEHWPIVKKVTVRGPFDVLSSGARMVDLPGVRDSNAARDRIAKDYLKNCNTVWIVSNITRAVDDKTAKELLGESFKRQLLMDGQYASSSISFICTKTDVISPTETIKALQLEDDCSPFFAEIKDQKKKKRDAAAVAREAGAMVKEHKKNLRTLDREIASLNDVVDAETQKPDGERNDGDIGEYTLTLEELKAVRLETEGELKKLNQKVTGCKNVEAKADLAIEAENKKIKTLCARARNEFAREQIARDFRAGLRQMIRKAERINRRRLNGGVRGGMNNANNNANHNNNGDGDGDEEEDDDDDDDEYDEEEDGEEGDAVGGTSLPVFTVSSADYMKLKGGLARDGTTSAFDDVEDTGVPHLMKHVHTTTRRRRGENARRLLRDVRALLQTILTQFAQASEGALPFAEKAKLAFDRLSSDIAASIAQATSEAVDDIQTAFRVHLNGKVHAGSINAEEAAPEVQSKWTRKYDKHNPRHSGLHFMTFRATVTRDGEYFSGTRGAISFNTDLAEPMYECFSAAWEALFTMLIPETLRELVGSVAACVKKAHAAMVEAVSLVSEGTEAAQSRARIDAVAKRCEELFATMAERFIETVSEKVKELQKEASRQLPTYVREEMHDTYAACAGERGSGCYDRMRATMAGDVQRLAPTMFLDAARQLEQETDGISKHVTSSVKQMTATVPTKVLRENYSTLWEKNLVVADAAARERVLTSIRGTLSRLPESYDAVEVVEDDAPPADAAVGGGARKVAKCGKVASREKNATTDPVVIDSGDDDDGEGASDVDMDENDVDGDSDFEVSKKEEKKTKTNAKAAKRRMEVDAEEHADRSDADDIDEEGEGDESEEGEEEEAEDQEGEEEEDQEGEVDEEQEGEVDEDQQGEEDQEGEGDDSYPENEGIQDENGVSGESEDDEDDDYQGESSRDEGGESSDDADDADADADAISSLLRNGSDEIEVNSEPPSSQGLRDASTPNAAAAKKRKHCDDDDDEHDRRASRLSKSPRTATPTRTNASRAGSVCSSVSRGTPRKSPVSQRSFESDGDDDDSEDDELLASAEMQ* # ORIGINAL: g6775.t1 original gene structure, not modified by PASA NODE_2283_length_6879_cov_40.597 AUGUSTUS gene 2645 6198 . + . ID=g6775;Name=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS mRNA 2645 6198 . + . ID=g6775.t1;Parent=g6775;Name=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 2645 3031 . + . ID=g6775.t1.exon1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 2645 3031 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 3273 3413 . + . ID=g6775.t1.exon2;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 3273 3413 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 3875 4016 . + . ID=g6775.t1.exon3;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 3875 4016 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 4255 4397 . + . ID=g6775.t1.exon4;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 4255 4397 . + 2 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 4722 4922 . + . ID=g6775.t1.exon5;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 4722 4922 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 5423 5485 . + . ID=g6775.t1.exon6;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 5423 5485 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 5898 5985 . + . ID=g6775.t1.exon7;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 5898 5985 . + 0 ID=cds.g6775.t1;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS exon 6194 6198 . + . ID=g6775.t1.exon8;Parent=g6775.t1 NODE_2283_length_6879_cov_40.597 AUGUSTUS CDS 6194 6198 . + 2 ID=cds.g6775.t1;Parent=g6775.t1 #PROT g6775.t1 g6775 MRTRSLVVVGLALLALLVLVCSARGAEESASNPVGEEIVDATVANDNAEDDVNVPENGANAAEDDANDKEDKDGEPDVKEGLSAEELYKQGMAALDAAEGDVEHAYELLLRAREMKHKGATLKVAEARLLGGHLDMDIDAARDDLIELANVGLPAAQFLLGFMYSVGLGVESNQAKALVYHTFAALGDETRSQMALGYRYMHGISVPANCETSILYYRKAADKVARDIKAGGGTVVEMTRLSVVEDGGRSSQRLSDEDIIQFYQYTADRGDVVLGQLNLQGGHGFQQNAERAYHYFDRAAQNGDAGAMAFLGQMYAQGKGVAQNNETALKYYKLAAEKGNAAAQNGLGHMYLHGLGVPKSVTEAFKYFAEAAKHGNADGQLHLGLMYYN* # PASA_UPDATE: g6774.t1, single gene model update, valid-1, status:[pasa:asmbl_3937,status:12], valid-1 NODE_2283_length_6879_cov_40.597 . gene 95 1603 . + . ID=g6774;Name=g6774.t1 NODE_2283_length_6879_cov_40.597 . mRNA 95 1603 . + . ID=g6774.t1;Parent=g6774;Name=g6774.t1 NODE_2283_length_6879_cov_40.597 . five_prime_UTR 95 96 . + . ID=g6774.t1.utr5p1;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . exon 95 252 . + . ID=g6774.t1.exon1;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . CDS 97 252 . + 0 ID=cds.g6774.t1;Parent=g6774.t1;5_prime_partial=true NODE_2283_length_6879_cov_40.597 . exon 422 531 . + . ID=g6774.t1.exon2;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . CDS 422 531 . + 0 ID=cds.g6774.t1;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . exon 729 869 . + . ID=g6774.t1.exon3;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . CDS 729 869 . + 1 ID=cds.g6774.t1;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . exon 1117 1603 . + . ID=g6774.t1.exon4;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . CDS 1117 1444 . + 1 ID=cds.g6774.t1;Parent=g6774.t1 NODE_2283_length_6879_cov_40.597 . three_prime_UTR 1445 1603 . + . ID=g6774.t1.utr3p1;Parent=g6774.t1 #PROT g6774.t1 g6774 IPAYYYMGFSDDEETSTEPRTIKDSPFVTKNIVLVACVKADEPRVVSRVEGEELANYWNARYAEVDMTTFEGLDSVIEAFVTMHDPATLDHRIARLERMRESAGTHQARKAKAAADQAKLSRAPSKGSMIVSAIKNFGSNVVSRLIPSKTKKAQSNARTDATAIQTSPAVVTPFATHTTENEDASSSDSESNSASDSATGSEYSAVAPVGVEKTESIEPSVVLAGKPMAEVALSHTANLVSVAA* # PASA_UPDATE: g9641.t1, single gene model update, valid-1, status:[pasa:asmbl_5140,status:12], valid-1 NODE_2863_length_4910_cov_36.7388 . gene 327 4793 . + . ID=g9641;Name=g9641.t1 NODE_2863_length_4910_cov_36.7388 . mRNA 327 4793 . + . ID=g9641.t1;Parent=g9641;Name=g9641.t1 NODE_2863_length_4910_cov_36.7388 . five_prime_UTR 327 328 . + . ID=g9641.t1.utr5p1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 327 453 . + . ID=g9641.t1.exon1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 329 453 . + 0 ID=cds.g9641.t1;Parent=g9641.t1;5_prime_partial=true NODE_2863_length_4910_cov_36.7388 . exon 668 797 . + . ID=g9641.t1.exon2;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 668 797 . + 1 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 1194 2663 . + . ID=g9641.t1.exon3;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 1194 2663 . + 0 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 2956 3254 . + . ID=g9641.t1.exon4;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 2956 3254 . + 0 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 3475 3534 . + . ID=g9641.t1.exon5;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 3475 3534 . + 1 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 3815 3872 . + . ID=g9641.t1.exon6;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 3815 3872 . + 1 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 4161 4322 . + . ID=g9641.t1.exon7;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 4161 4322 . + 0 ID=cds.g9641.t1;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . exon 4638 4793 . + . ID=g9641.t1.exon8;Parent=g9641.t1 NODE_2863_length_4910_cov_36.7388 . CDS 4638 4793 . + 0 ID=cds.g9641.t1;Parent=g9641.t1;3_prime_partial=true #PROT g9641.t1 g9641 AIFIGFYSSISINNSSFGNNCARMVGGAIRASGEGALSVVDSKIIGNKARFGGGIHALLLFKVTVASSELRDNSGMYGGGAIHVEDATTLQVTGSHFRRNIAPGGYGGAVFVGGIALANFTSTLFTKNSAGLDGGGICGSSLEAVSNSCSELFPGLFDSGVGTFVIMLSNCTAYGNSAAGNGGFLRLQGGHTTIADNSVIANSSAGAAGGGAYFFGFETVPVFGTSSSTAVSTFSVFNSTLEYNKCNDVGGGVYLWQGSSSAVATFKGAVLRQNSALTGGGLFSETPWIKPDMSAGESGLRVTGNTAITGFGENLATPATRVRIEYADYNGEFFMASNAQEPDLNVSVPLDFGPRSSSRSFPADGAVFYAGDLLPQLKTTVLDIFSQDAVWGGESVTAVLQPVSLNGPYADAVPVLVGGGERSLSGGSVLFDRLGIHGPSGVYLLNFTMKTLGRMSRWAAVPVTLAPCSDSPTRIAVTERTATGQLRVTCQVIVGSARSGGLTGGQIAAASTVPAVVVCGVIGVIAAGFVRTRMQRLKKEVHAKFVRERIDGRDELACIEMDRSCIKIDGRIGEGEFGVVSKARIFGPSGCKLCAAKALHEGSTLTQRNAFVQEAELMRSVPSHANIVALVGTSLRVEPMLLLMELCSEGDLRSYVSGIPAHMHRAPAVVTQLLSFAADIARGMHHLSQCRIVHRDLAARNVLICSVPSGLCAKLSDFGLSRTLGASNYYVRKRTRRLPIRWLAPESIVRKTFSTASDCYSYGVVLYEMFSFGMQPYFDIDNSVVTRYIVSGNVLESPVNCPDDVYAVMRACWNMDPAQR # PASA_UPDATE: g2834.t1, single gene model update, valid-1, status:[pasa:asmbl_7215,status:12], valid-1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . gene 40 1706 . + . ID=g2834;Name=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . mRNA 40 1706 . + . ID=g2834.t1;Parent=g2834;Name=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . exon 40 120 . + . ID=g2834.t1.exon1;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . CDS 40 120 . + 0 ID=cds.g2834.t1;Parent=g2834.t1;5_prime_partial=true NODE_4312_length_1835_cov_37.7313_potentialcontaminant . exon 303 452 . + . ID=g2834.t1.exon2;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . CDS 303 452 . + 0 ID=cds.g2834.t1;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . exon 630 735 . + . ID=g2834.t1.exon3;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . CDS 630 735 . + 0 ID=cds.g2834.t1;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . exon 915 1232 . + . ID=g2834.t1.exon4;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . CDS 915 1232 . + 2 ID=cds.g2834.t1;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . exon 1600 1706 . + . ID=g2834.t1.exon5;Parent=g2834.t1 NODE_4312_length_1835_cov_37.7313_potentialcontaminant . CDS 1600 1706 . + 2 ID=cds.g2834.t1;Parent=g2834.t1 #PROT g2834.t1 g2834 AQYYGEISIGTPPQVFTVVFDTGSSNLWIPSSKCSFTQIPCDVHKKYYGDKSSTYVANGTAFSIQYGSGSMSGFLSQDDVTVGDVVVKGQVFAEATKEPGIAFIASKFDGLLGLGFQTIAVDNVVPVWYNMVSQGLVPEPVFAFWLNRGGNAPGGELVLGGVDASHYTGDITYLPVTRQAYWQFAMDDVLVGGVTGGYCANGCQAIADSGTSLLAGPSAIIKEINKKIGAVGVFAMEVCAALHCGDLKPVNLS* # PASA_UPDATE: g11655.t1, single gene model update, valid-1, status:[pasa:asmbl_4461,status:12], valid-1 NODE_2506_length_6048_cov_38.3921 . gene 3343 5934 . - . ID=g11655;Name=g11655.t1 NODE_2506_length_6048_cov_38.3921 . mRNA 3343 5934 . - . ID=g11655.t1;Parent=g11655;Name=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 5925 5934 . - . ID=g11655.t1.exon1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 5925 5934 . - 0 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 5410 5832 . - . ID=g11655.t1.exon2;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 5410 5832 . - 2 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 5049 5273 . - . ID=g11655.t1.exon3;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 5049 5273 . - 2 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 4626 4876 . - . ID=g11655.t1.exon4;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 4626 4876 . - 2 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 4342 4467 . - . ID=g11655.t1.exon5;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 4342 4467 . - 0 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . exon 3343 4181 . - . ID=g11655.t1.exon6;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . CDS 3828 4181 . - 0 ID=cds.g11655.t1;Parent=g11655.t1 NODE_2506_length_6048_cov_38.3921 . three_prime_UTR 3343 3827 . - . ID=g11655.t1.utr3p1;Parent=g11655.t1 #PROT g11655.t1 g11655 MYGELEAPKINNGSVLFFGILPNPTSPNKKHACFIETDIGEWSAPGTITPEGWLNCSTIRSQQRTALKGNLTLRFTTNCDSKLNAPFCVGESGFLTTTYFIKSVTVSDIWIGSLGGCRSWLCCFFLKLAKKGINSDDWDTEDDKNNQRIASGGGDISITSDYCSQSSGMSTFCKASCPQRYTLYKQLYTIFSRKDGGQSAKLIKAWNLCYLTTCSRWSWGFTYMKKESNCFDFVTHVPLNIAVENAELSVGTNAITTKKACAANKCLEKTELYQALNEAFRSNFTYKLENNQLSEPKPMFGGQNPTPIWDYVSELFGNSVSGTITVWADENGFSSKDKNYVNALRGMTMYNEKVVGVTFMVPDFIQGNPSVDCPKQGPDRNPCIETLVRQHVTKRMVRWSFWACGYYTKPIPTEITAKVFCVVNGVITTSPSCVSDDSWKPKVTTAAASSSSSTSGTKPATG* # ORIGINAL: g11654.t1 original gene structure, not modified by PASA NODE_2506_length_6048_cov_38.3921 AUGUSTUS gene 613 2584 . + . ID=g11654;Name=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS mRNA 613 2584 . + . ID=g11654.t1;Parent=g11654;Name=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 613 621 . + . ID=g11654.t1.exon1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 613 621 . + 0 ID=cds.g11654.t1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 863 946 . + . ID=g11654.t1.exon2;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 863 946 . + 0 ID=cds.g11654.t1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 1195 1224 . + . ID=g11654.t1.exon3;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 1195 1224 . + 0 ID=cds.g11654.t1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 1399 1519 . + . ID=g11654.t1.exon4;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 1399 1519 . + 0 ID=cds.g11654.t1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 1639 1777 . + . ID=g11654.t1.exon5;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 1639 1777 . + 2 ID=cds.g11654.t1;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS exon 2119 2584 . + . ID=g11654.t1.exon6;Parent=g11654.t1 NODE_2506_length_6048_cov_38.3921 AUGUSTUS CDS 2119 2584 . + 1 ID=cds.g11654.t1;Parent=g11654.t1 #PROT g11654.t1 g11654 MRKHDLVSFVVAKSDDSSAPHPHLYLFECEKAIHLTEVCDKVFALAFQRNSTNPTVVAQVQHMFASHEGEGHVHAPASDPRAMPSGAHADAFGGTPSSTPSGISVVEQPVIMRRQSMSGATEFVVYGGSFSGTVFATRPDEATLLHVSRQNSLNQNGGGAQCIATPPTSAGLPAPSTRPLSSLIDFDSPVSPAEASLSMPAAAAIVTTFGFELTAQSSHHVSSQNEQYFQYGQHGGGGHAPATTQAYPNPFEVGSQSRAPNPFADSLQVGDWQRLEFFESLG* # ORIGINAL: g9574.t1 original gene structure, not modified by PASA NODE_1054_length_14383_cov_41.9347 AUGUSTUS gene 6423 9665 . - . ID=g9574;Name=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS mRNA 6423 9665 . - . ID=g9574.t1;Parent=g9574;Name=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 8779 9665 . - . ID=g9574.t1.exon1;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 8779 9665 . - 0 ID=cds.g9574.t1;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 7305 8658 . - . ID=g9574.t1.exon2;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 7305 8658 . - 1 ID=cds.g9574.t1;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 7039 7191 . - . ID=g9574.t1.exon3;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 7039 7191 . - 0 ID=cds.g9574.t1;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 6816 6953 . - . ID=g9574.t1.exon4;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 6816 6953 . - 0 ID=cds.g9574.t1;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 6423 6686 . - . ID=g9574.t1.exon5;Parent=g9574.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 6423 6686 . - 0 ID=cds.g9574.t1;Parent=g9574.t1 #PROT g9574.t1 g9574 MQRFQSILHLRTVTERVDALETFIAGADDEDCQLFARSFPVLLNAIFGLDGQPGWIDQSEASSVSRLLSSAGPLFRVMLLLARDSFVRYEFPERHLPAATRHMLETGDLAALPPLYAGRIRVGPGGCKVESLNIIEYYIFFLAYYLATPPTAGGGTQSSSSGPGVGVSTQHLPISSQASFLSVGSMSASGFVMHSPNSGSRYESMQVYSAVMRDYMSYFFPVASDEDEERSRWPAPGDMVAGEGDDGRAIRGLGLGLAQGLGGIGGMASRGSGLIDSLRSASRTSPTAKREPGVMGAADPALAEFFVRVLAEFWLNQYGHITLPEPASGFAMPDLSAVAAAQMRPPRTLFDCLSTLIGRVNSFCTASSGGSSRARRGSYSSSRPGLGSGTGSLSQGRPHPFAEGGSPARSLFASIIRVPLYRFLRVVMAPRAPEVPGHFFSMVSVWLEFCRPWKYDSTFDDYAQGLSSIAEDVRYGRLTLEMLLERPVAPRQRSRLQQAPNGTFVAERALADEDEDDHEDRAGIGSARSSRRPPAVVQPVWTGLEDDGPYRQFVLDNLPFYTVLTAQFLRSAISTDPRLEKDLRLLRRVGDFLSTPCLVPLLQAAEESMSGIPTRPSTPQLASARRGTLLPQSTTCNVPSQQVRLAFSALEGPRVEPFVLFDGGIRRGAEALLEVINSARKSMVAAEKPSPLSPAPVGAWLSNKLGKIADVLFATNDDVRPAGPRVVGRTSGSVIEYVIWRWVNAFRLESELLSHDSDELRRPSILAAANRNKLTELFHPQTQFAEDALHLSPAGVNQLKFGLRKCSNRDIPIVGYPELVPRRSYEIAWMIPLTIRWSRYINEKLFGSYERPPVVSPRVMVRSRTAPVRIDLRFLADSRFYIRLAVVVISLWFAFCVVCAFASLFRGLGPDAGGRADGESMYRVGQRKHKL* # PASA_UPDATE: g9575.t1, single gene model update, valid-1, status:[pasa:asmbl_210,status:12], valid-1 NODE_1054_length_14383_cov_41.9347 . gene 10239 12111 . + . ID=g9575;Name=g9575.t1 NODE_1054_length_14383_cov_41.9347 . mRNA 10239 12111 . + . ID=g9575.t1;Parent=g9575;Name=g9575.t1 NODE_1054_length_14383_cov_41.9347 . five_prime_UTR 10239 10613 . + . ID=g9575.t1.utr5p1;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . exon 10239 10964 . + . ID=g9575.t1.exon1;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . CDS 10614 10964 . + 0 ID=cds.g9575.t1;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . exon 11149 11809 . + . ID=g9575.t1.exon2;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . CDS 11149 11809 . + 0 ID=cds.g9575.t1;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . exon 11952 12111 . + . ID=g9575.t1.exon3;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . CDS 11952 12022 . + 2 ID=cds.g9575.t1;Parent=g9575.t1 NODE_1054_length_14383_cov_41.9347 . three_prime_UTR 12023 12111 . + . ID=g9575.t1.utr3p1;Parent=g9575.t1 #PROT g9575.t1 g9575 MAVKNVAPRGPANEASNGVAEAKNHATSGHDAYPLYTRGDVGLHCTPDDAWIVFDGAVYDVTAFLGAHPGGAGVIEEHLGDDVSEVMRDNAVHSHSDSAFAILSKYRIGVLFGEEKKSVDEFPVSERVKCADKLIKIERGMVFQVHRLRELYDEWVHSPIDADLRMFDHGFFEFFSRTPWYLIPLVYLPIVVVCLKYALSVLALPIVAAAFAAGVLVWTAIEYSLHRFVFHLDPPADSPICLTFHFVMHGVHHKAPMDRGRLVFPPVVGLLIAAGFYAVFAAGLPAFLAEAIFSGGLFGYVCYDCFHYYTHHGQPFSAYMREMKSYHMAHHYKDRNAGFGITSKLWDIPFKTTFKRSQCE* # ORIGINAL: g9576.t1 original gene structure, not modified by PASA NODE_1054_length_14383_cov_41.9347 AUGUSTUS gene 12150 14253 . - . ID=g9576;Name=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS mRNA 12150 14253 . - . ID=g9576.t1;Parent=g9576;Name=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 14180 14253 . - . ID=g9576.t1.exon1;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 14180 14253 . - 0 ID=cds.g9576.t1;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 13905 13989 . - . ID=g9576.t1.exon2;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 13905 13989 . - 1 ID=cds.g9576.t1;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 12936 13770 . - . ID=g9576.t1.exon3;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 12936 13770 . - 0 ID=cds.g9576.t1;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 12429 12800 . - . ID=g9576.t1.exon4;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 12429 12800 . - 2 ID=cds.g9576.t1;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS exon 12150 12337 . - . ID=g9576.t1.exon5;Parent=g9576.t1 NODE_1054_length_14383_cov_41.9347 AUGUSTUS CDS 12150 12337 . - 2 ID=cds.g9576.t1;Parent=g9576.t1 #PROT g9576.t1 g9576 MLGVRSDHALVALVLQQMHSDEDVRAASLDALRALGINDQGGMIRKHFERTMKSAGGQADFQTWIAQIKTNFASYLLHKASGHDKKKKKKKKRRKTAKMRAAHSAQSGDPLAIRARKLISSRRFPALEIALHSGEVMQGGIAAHIRTWEQQQEGALRSTSHASHDDGDGGVRDGSATPHAGGRGRGFSHHGYRLPPGQVSELALAPHHLQYLKISFPAVEGAVLTVTTTSNIIKILSTRLLRRDEETAAAFVKIETISEGMADLAAIMAKDGVEVYNRRFLIQIRAMLEEDLLGTEADADPYQPPRSHSADQDDDGSPEPKTTVKRRFVLPEYLAALDDDSDYELSMSDSYDGSASESGSEYTTATSSEEEVPPINPLAIPKVAQQTNFFDALVHFLQVEQEREMLEEARLREQENRERKHGVLCLPRAVSRTLPRIGRTHCSKCHPERETSLVLGKHVQHICAHATGISLGMRPKNIAVFGEEELGGASDTRTLATRRRLLSTSYVKYYVAEKSYA* # PASA_UPDATE: g9571.t1, single gene model update, valid-1, status:[pasa:asmbl_207,status:12], valid-1 NODE_1054_length_14383_cov_41.9347 . gene 36 577 . - . ID=g9571;Name=g9571.t1 NODE_1054_length_14383_cov_41.9347 . mRNA 36 577 . - . ID=g9571.t1;Parent=g9571;Name=g9571.t1 NODE_1054_length_14383_cov_41.9347 . five_prime_UTR 543 577 . - . ID=g9571.t1.utr5p1;Parent=g9571.t1 NODE_1054_length_14383_cov_41.9347 . five_prime_UTR 166 301 . - . ID=g9571.t1.utr5p2;Parent=g9571.t1 NODE_1054_length_14383_cov_41.9347 . exon 543 577 . - . ID=g9571.t1.exon1;Parent=g9571.t1 NODE_1054_length_14383_cov_41.9347 . exon 36 301 . - . ID=g9571.t1.exon2;Parent=g9571.t1 NODE_1054_length_14383_cov_41.9347 . CDS 36 165 . - 0 ID=cds.g9571.t1;Parent=g9571.t1;3_prime_partial=true #PROT g9571.t1 g9571 MARPSLSLREIAGMFAECFEVAIHTILYVRGVYPKEIFEPRKK # PASA_UPDATE: g9573.t1, single gene model update, valid-1, status:[pasa:asmbl_208,status:3], valid-1 NODE_1054_length_14383_cov_41.9347 . gene 2702 6028 . - . ID=g9573;Name=g9573.t1 NODE_1054_length_14383_cov_41.9347 . mRNA 2702 6028 . - . ID=g9573.t1;Parent=g9573;Name=g9573.t1 NODE_1054_length_14383_cov_41.9347 . five_prime_UTR 5956 6028 . - . ID=g9573.t1.utr5p1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 5887 6028 . - . ID=g9573.t1.exon1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 5887 5955 . - 0 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 5438 5499 . - . ID=g9573.t1.exon2;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 5438 5499 . - 0 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 5277 5340 . - . ID=g9573.t1.exon3;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 5277 5340 . - 1 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 5130 5169 . - . ID=g9573.t1.exon4;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 5130 5169 . - 0 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 4765 4961 . - . ID=g9573.t1.exon5;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 4765 4961 . - 2 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 4388 4467 . - . ID=g9573.t1.exon6;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 4388 4467 . - 0 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 4071 4137 . - . ID=g9573.t1.exon7;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 4071 4137 . - 1 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 3761 3852 . - . ID=g9573.t1.exon8;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 3761 3852 . - 0 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 3457 3611 . - . ID=g9573.t1.exon9;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 3457 3611 . - 1 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . exon 2702 3129 . - . ID=g9573.t1.exon10;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . CDS 2978 3129 . - 2 ID=cds.g9573.t1;Parent=g9573.t1 NODE_1054_length_14383_cov_41.9347 . three_prime_UTR 2702 2977 . - . ID=g9573.t1.utr3p1;Parent=g9573.t1 #PROT g9573.t1 g9573 MSRSAVRIVLGTMEMGRRANEAQSAEMVDIFLSRGHRELDTALMYCGGKTEKILGAMPTTHDASKVSVHTKVNPWSPNGLKPESVSRQFSNCLANLKTESVDVLYLHAPDHATPIEHTLAAVDALHKAGKFKELGLSNYASWEVAEIYYLCKQNGWVLPTLYQGMYNAITREVEKELFPCMKRLGIRFYVYNPLAGGLLTGRYVYEDAEKEPAGRFFGNNWAEAYRTRYWKQSNFDAIELVKTALDGAYGSNKVSLAEASLRWLTHHSYLKGEHGDAVIVGASTIKHLIANLDALECAEPLAESVVEAFNRAWQNVRGECPVYFR* # PASA_UPDATE: g9572.t1, single gene model update, valid-1, status:[pasa:asmbl_209,status:3], valid-1 NODE_1054_length_14383_cov_41.9347 . gene 753 2616 . + . ID=g9572;Name=g9572.t1 NODE_1054_length_14383_cov_41.9347 . mRNA 753 2616 . + . ID=g9572.t1;Parent=g9572;Name=g9572.t1 NODE_1054_length_14383_cov_41.9347 . five_prime_UTR 753 934 . + . ID=g9572.t1.utr5p1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . exon 753 1018 . + . ID=g9572.t1.exon1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . CDS 935 1018 . + 0 ID=cds.g9572.t1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . exon 1280 1366 . + . ID=g9572.t1.exon2;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . CDS 1280 1366 . + 0 ID=cds.g9572.t1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . exon 1522 1727 . + . ID=g9572.t1.exon3;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . CDS 1522 1727 . + 0 ID=cds.g9572.t1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . exon 1941 2034 . + . ID=g9572.t1.exon4;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . CDS 1941 2034 . + 1 ID=cds.g9572.t1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . exon 2428 2616 . + . ID=g9572.t1.exon5;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . CDS 2428 2610 . + 0 ID=cds.g9572.t1;Parent=g9572.t1 NODE_1054_length_14383_cov_41.9347 . three_prime_UTR 2611 2616 . + . ID=g9572.t1.utr3p1;Parent=g9572.t1 #PROT g9572.t1 g9572 MDDLLFLGQEAQGEDTTHARRAIDRLKEAWRNEKSAPELLQYEEELVALLLAEVAAQDDVVTQRQENVAEAFFGNLLQMEVDRVKFVLRSYLRTRLRKIEKHAFHVLKHRDERTKLSEHELKFTRDLVDEMARHVMASALDRFPAQFRKLDDEISPEGSMVTAPNMDAFVFVRVLETQGNFALGDADVTVDLERGDLYICRYDPIRPLLHEGKVALL* # ORIGINAL: g10594.t1 original gene structure, not modified by PASA NODE_733_length_18392_cov_39.9601 AUGUSTUS gene 6279 7331 . + . ID=g10594;Name=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS mRNA 6279 7331 . + . ID=g10594.t1;Parent=g10594;Name=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 6279 6365 . + . ID=g10594.t1.exon1;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 6279 6365 . + 0 ID=cds.g10594.t1;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 6622 6755 . + . ID=g10594.t1.exon2;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 6622 6755 . + 0 ID=cds.g10594.t1;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 6964 7058 . + . ID=g10594.t1.exon3;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 6964 7058 . + 1 ID=cds.g10594.t1;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 7294 7331 . + . ID=g10594.t1.exon4;Parent=g10594.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 7294 7331 . + 2 ID=cds.g10594.t1;Parent=g10594.t1 #PROT g10594.t1 g10594 MANRKVNNNYKKVRNAPKLKRSRIRNEKKMAADRAVQKAENSMQVVVESAAAETPDVPKVITDYRRRIDRRAKRTNPTANTAVSAKKARLLLKKGHSAAKAKQAAQGTETAAAAMEL* # ORIGINAL: g10593.t1 original gene structure, not modified by PASA NODE_733_length_18392_cov_39.9601 AUGUSTUS gene 1696 4995 . - . ID=g10593;Name=g10593.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS mRNA 1696 4995 . - . ID=g10593.t1;Parent=g10593;Name=g10593.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 1696 4995 . - . ID=g10593.t1.exon1;Parent=g10593.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 1696 4995 . - 0 ID=cds.g10593.t1;Parent=g10593.t1 #PROT g10593.t1 g10593 MERVKETYNRLMGTGEEGLKAEVKPPLGATEQAGSEIPARLPTGTEMSSEQSLGEKSTTTTAKTATTPLSEKGIVAAAADTVLGASAMTVDLAKGAAATVKDTLFGPSETPAPIESKKTESKTSATDMSRGALEEAGDVARRAGDTARGAWSSATSETLESARDTQKGLEERGAAARGASGPIEEHVTSGDLAEDVKRVGAHAVDAAKGVAHSALDAVDKARESLSTAGHMIDETLHTDSTKEQRERMASSISHAAVESTDALQTAGEQARHGIAETAQSLVDKAKATATGVVTSVVGTAEAALGKVIDTTNWARHSVATTIEPSSEEVRRLESEKDTSEQHPGMLGDIKRLGVDSAEYAKETAVAGADTALGALGVAKDKTASVLESAKSTAAGAYDATMNTVAGAASVAADKAVGAKDVAVDTAVAAADTTRGALGVAKDTATHALESARDTAASMAKLAVDTTYGAYEYTKDTAVHAAEAARDTVGNVVHMAVDTTRGAFDYTVGTAMHAAESARDAVESVAHKAADTTVGAYEYTKDSATHAADVVLDRAEQAAETVKSTAHTAANITLGAAYEAKDKAGDIVEEAKDTAASAANTTLGALQSAKDTAVGAAQVVKDKAGDVVEGAKDTAQKAADTTRGALYSAKDVAADAAKAAREKAGAAAESVKDTAVGVAQVAKDKAGAAAESVKGTAQKATDTTRGALYSTKDSAADAARVAKEKMGETAAKADSRIQSAADTARGATAKASDKWSSGTAAGTAGVPVAGGHQKSEYSSDLDRKAMSDAVTADASEYKRALRGDESVPETVKAQVERDGGKERFKSVTDTNLRGVGADRPIDTTTKPASAPIIRPPSPATQANKWGSLGEAAHRTGDIAREKFEDVKESMRAAVEGVKDTFVGNERTEYEIVNLGQRSSDIVGTGAQVTGRSTAHTTTTAPSSLGTGTRGTTLLHSSLGSTQGSGAASTGTHTTYKPASPLGPVTQAGGQKGVGATGGSTQYGTYSTGNRSFGPTGVYEGFSSGGHLPSGDMTGVQSTHAQGSYLGQYPTGHTTQTSQTAWTAHGPGSYADIVRESGDPWDHMGETQKDLTRKQGVNREE* # ORIGINAL: g10595.t1 original gene structure, not modified by PASA NODE_733_length_18392_cov_39.9601 AUGUSTUS gene 7965 9187 . - . ID=g10595;Name=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS mRNA 7965 9187 . - . ID=g10595.t1;Parent=g10595;Name=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 9068 9187 . - . ID=g10595.t1.exon1;Parent=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 9068 9187 . - 0 ID=cds.g10595.t1;Parent=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 8646 8736 . - . ID=g10595.t1.exon2;Parent=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 8646 8736 . - 0 ID=cds.g10595.t1;Parent=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 7965 8098 . - . ID=g10595.t1.exon3;Parent=g10595.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 7965 8098 . - 2 ID=cds.g10595.t1;Parent=g10595.t1 #PROT g10595.t1 g10595 MSLTNPFQPTGFRAVVLNVDDECRASELSCKANGFDVLAKGLKQPFYYSATDMRDFTRLQDSTRQKTFVYVPDEHAIPYESNEQLQHPIASSLFGSLVIGKYALKHVEPQNNKP* # ORIGINAL: g10597.t1 original gene structure, not modified by PASA NODE_733_length_18392_cov_39.9601 AUGUSTUS gene 12474 15850 . + . ID=g10597;Name=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS mRNA 12474 15850 . + . ID=g10597.t1;Parent=g10597;Name=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 12474 12627 . + . ID=g10597.t1.exon1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 12474 12627 . + 0 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 13262 13389 . + . ID=g10597.t1.exon2;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 13262 13389 . + 2 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 13738 13863 . + . ID=g10597.t1.exon3;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 13738 13863 . + 0 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 14068 14177 . + . ID=g10597.t1.exon4;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 14068 14177 . + 0 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 14557 14698 . + . ID=g10597.t1.exon5;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 14557 14698 . + 1 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 14894 15018 . + . ID=g10597.t1.exon6;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 14894 15018 . + 0 ID=cds.g10597.t1;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 15241 15850 . + . ID=g10597.t1.exon7;Parent=g10597.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 15241 15850 . + 1 ID=cds.g10597.t1;Parent=g10597.t1 #PROT g10597.t1 g10597 MMGQVVTLSARVGDASGGTMSLSALEELLERRRRSRVLVTAIDMSSQRLVEAPLQLSTVVELDVLKLAHNTVSALPTPFGALNCLTHLDLQHNNFTAFPAAICCMRQLERLQLSHNRLTDIPEEIGNLTSLASLDVSYNRIRSVPATLSNARQLSLLCLSHNVVEHVPVEIIRKCKRIVLQLQGNRGMLRGPFPRQHESPPSLKELAGRTLLTRSREIPQDSLPHDLLSFILTARQCSDCGGPYFQTCYIRYRSVASPSLVSEGVTYSHRLCSPHWHDERQRIRRMFRAQMHSDDLASAAKHCVSPTAALPPIPAPNSMTASPPSLTARCTCGGAAHAAGELANPIANTSRILAVDRSLHSSTVTAASVDIALGLAAVGVPLDLSVVYGRRAAEIGLSDASRVWAMGDYELRVCLGMASPEHRMLMRRARAREHVTKVAPDGATVMGGAAKAVSVGFGLGGYPM* # PASA_UPDATE: g10592.t1, single gene model update, valid-1, status:[pasa:asmbl_9108,status:12], valid-1 NODE_733_length_18392_cov_39.9601 . gene 112 970 . - . ID=g10592;Name=g10592.t1 NODE_733_length_18392_cov_39.9601 . mRNA 112 970 . - . ID=g10592.t1;Parent=g10592;Name=g10592.t1 NODE_733_length_18392_cov_39.9601 . five_prime_UTR 226 970 . - . ID=g10592.t1.utr5p1;Parent=g10592.t1 NODE_733_length_18392_cov_39.9601 . exon 112 970 . - . ID=g10592.t1.exon1;Parent=g10592.t1 NODE_733_length_18392_cov_39.9601 . CDS 112 225 . - 0 ID=cds.g10592.t1;Parent=g10592.t1;3_prime_partial=true #PROT g10592.t1 g10592 MAPQMSLVQRIAQQAMLAFRSANGGPLRPSHVETLRQM # ORIGINAL: g10596.t1 original gene structure, not modified by PASA NODE_733_length_18392_cov_39.9601 AUGUSTUS gene 9622 9858 . + . ID=g10596;Name=g10596.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS mRNA 9622 9858 . + . ID=g10596.t1;Parent=g10596;Name=g10596.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS exon 9622 9858 . + . ID=g10596.t1.exon1;Parent=g10596.t1 NODE_733_length_18392_cov_39.9601 AUGUSTUS CDS 9622 9858 . + 0 ID=cds.g10596.t1;Parent=g10596.t1 #PROT g10596.t1 g10596 MKNCPGCSGRGSPSAHRPISRTLLAPALDPLDPLDPLDPLDPLDPLDPLDPLDPEFDPLESAEKVTDVFEKRATRGRT* # PASA_UPDATE: g8916.t1, single gene model update, valid-1, status:[pasa:asmbl_9634,status:12],[pasa:asmbl_9635,status:12],[pasa:asmbl_9637,status:12],[pasa:asmbl_9638,status:12], valid-1 NODE_841_length_17004_cov_41.3415 . gene 507 10195 . + . ID=g8916;Name=g8916.t1 NODE_841_length_17004_cov_41.3415 . mRNA 507 10195 . + . ID=g8916.t1;Parent=g8916;Name=g8916.t1 NODE_841_length_17004_cov_41.3415 . five_prime_UTR 507 562 . + . ID=g8916.t1.utr5p1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 507 1253 . + . ID=g8916.t1.exon1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 563 1253 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 1508 1961 . + . ID=g8916.t1.exon2;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 1508 1961 . + 2 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 2182 3112 . + . ID=g8916.t1.exon3;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 2182 3112 . + 1 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 3322 3666 . + . ID=g8916.t1.exon4;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 3322 3666 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 4093 4443 . + . ID=g8916.t1.exon5;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 4093 4443 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 4747 5082 . + . ID=g8916.t1.exon6;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 4747 5082 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 5256 5594 . + . ID=g8916.t1.exon7;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 5256 5594 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 5817 6158 . + . ID=g8916.t1.exon8;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 5817 6158 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 6685 7032 . + . ID=g8916.t1.exon9;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 6685 7032 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 7400 8354 . + . ID=g8916.t1.exon10;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 7400 8354 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 8827 9020 . + . ID=g8916.t1.exon11;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 8827 9020 . + 2 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . exon 9244 10195 . + . ID=g8916.t1.exon12;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . CDS 9244 9900 . + 0 ID=cds.g8916.t1;Parent=g8916.t1 NODE_841_length_17004_cov_41.3415 . three_prime_UTR 9901 10195 . + . ID=g8916.t1.utr3p1;Parent=g8916.t1 #PROT g8916.t1 g8916 MMKMIPTAQWALVAIVVCVVMAHSAFAAPAGDNHKGHKCIHDKIMRKTKVWHSKVDYVDHPWDASNGNRSRRADASAYAAFRVVPYFVDVDSSNAELTTDKISFIKNVIIPRAVDFLNKALKVIPVQGNLQLKRQCYSWCSGGGVIKCKDYGGDMTCGEATVPSAHIAPAGLYSGSGCTLTGPVAQPSGPGVPNADYILYVTANSGDCGGNTLAFASYCVLDSLTDRPLAGRANFCPSKIDTSEPDSQFATAIHEITHAMGFSSSAWPYFRDATGQPRTVRDSNGTPLKSDPSYQNTVKTYSDATLGKTVSKFVTETVKAELARHSGCPTIDGAEIEDEGGSGTAGSHWEERVFFNEYMTGVSKYTAVVSALTFAMLEDSNWYKADYTYAHTIPWGRKAGCNFYTQKCLSGSMTSISPANSVSSYPRFFCVNQYASSTSSCTLAQLQAAQCTVSCSADAYGVSYCMPASNGVADGCPYYYPFNGINSECAATAGKGCAMTKKSSASSYSATCYAMACVRVSGSFAVRFTVGTATVDCNKDNAVLTTADGTSVYCPVINDVCTDGDCSTDCGGPANGVCVSGLCRCVDGTSGTTCGGTAPVTYKWVVLTYGTCSTPCNGGVQSPATFQCRTSGDVATIDSNCNGIAKPTSTIACNPTACFWAVATTSNCSATCGVTGTRTVTYVCREPYNSASVDGTLYCASITKPSSTQSCTGACTAGTYVLSAWGACSRACSGGTHTRTYDCRDSQGGLLTAANCAGQAIPTLLSEPCNQNNCTWAAATTGACSVNCGSGTKAVTYTCQNPYTGTTATTESLCLDAKPPATIACTGTNCATVTYDWVVLTYGVCNKPCNGGQQSPATFECRSSNGATAPAANCTGKAQPTATRACNPLACFYTVGNYVGCAPAGTGCSETGAAQCREPYANAEVTASVYCTGLTVPTLKRACTTCTTWVAANWATCDKPCNSGQQTRTYDCRDLNGKLAPTANCTGQTPPSPLQRACNDQKCTWAILSNGACSAVCGNGFKNVTYMCQEPYGLKSTAVSNCLDAMPPTYTACVGTGSTCVFSYVPDAWGPCTAPCNGGTRTRTYSCRDGSNNKVADSFCAGKAVPSTSGACNTTQCVWNVVNYGPCSNACGSGVSTGTPICYDAIGNQVESRYCSAFPTPVTTKTCTGTQCVMYVPAAWTACSKPCGTGFRIRSIPCVNTLTNQPVDATQCTSQKLSMPPTREDCNVGACKWATVNPGTCSVTCGTGQATATVVCQDAAGSTITSDWCSSLAKPSTTIACTGDSCNSIPAWAITSEWSACSAVCNGGTQTRTVVCRNSGGVVSNDLCSAASKYATSQQCNVAPCTWLASVSATATCSVGCGTGVTTATVDCRDPTGAKVADTLCLAAKPSSSVTCSGTSSCPQYLWKAGAWGACSVSCGGGSQTRSVSCVSVDNSAATNTNCAGLTQPASSQACNTDVCAVPKWKGDCTAQCGASIRVATCADSLGNPQPASACASPTSTNLAADLAVCAATCASTYWESVCTNTVCGTTTKPVAICRSSVSGAALSDSICDSSAKSAAESMSCDQSKCIKYAYAVGDWGVCGAPCMPSSSTVSPKKYRSVVCTNAATKAVVNEGFCKNAGLVRPATDSVCNTVKCVGYTWFASDSGTCSAKGCGDKGAIQRTVSCTTEAGDSAPDASCDAASKPSTSADCVGYSCAATSSDNPDAGAGSSSGGGGFPIFAIAGAVGGLVVVGAIVGGVIYYKRRKASGDVKPQQSRYALKRQDSAEIQLNTMQAPSQTFEHINVIHNVDISPATKPRAAPSSNKPRPPPTSAPQHTSTPSAYEATPAAAASTAPYAAAAAVVAAPSRRPPVPPAAVSPAGDTPSNVREFKAVYAYQAQSPDELDIVEDDIILVTEVGADGWNHGKSQRTKRVGVFPSSYAVEVVKKPLKAPRPTKPALPSTPTPTPIPTSAPKPSPAGGPGPRPMIPTTPKPMLPPKH* # PASA_UPDATE: g8917.t1, single gene model update, valid-1, status:[pasa:asmbl_9632,status:12], valid-1 NODE_841_length_17004_cov_41.3415 . gene 11516 15474 . - . ID=g8917;Name=g8917.t1 NODE_841_length_17004_cov_41.3415 . mRNA 11516 15474 . - . ID=g8917.t1;Parent=g8917;Name=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 15362 15474 . - . ID=g8917.t1.exon1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 15362 15474 . - 0 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 13982 14963 . - . ID=g8917.t1.exon2;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 13982 14963 . - 1 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 13483 13662 . - . ID=g8917.t1.exon3;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 13483 13662 . - 0 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 12779 13037 . - . ID=g8917.t1.exon4;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 12779 13037 . - 0 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 12222 12641 . - . ID=g8917.t1.exon5;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 12222 12641 . - 2 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . exon 11516 11833 . - . ID=g8917.t1.exon6;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . CDS 11652 11833 . - 2 ID=cds.g8917.t1;Parent=g8917.t1 NODE_841_length_17004_cov_41.3415 . three_prime_UTR 11516 11651 . - . ID=g8917.t1.utr3p1;Parent=g8917.t1 #PROT g8917.t1 g8917 MSYLQGQTVVFTGRLQMPRAKATSLATSAGATVKSAISGTTNLIVAGADAGGKLAEAKARGITIWTEDYFISALAGAQELWAASEPAPNPTAASSSSALKRKRGATTTTTNTTTTETAAVGVDEQLEQQQDAPPAKRARSARTKASTALKGVSAAAGKDAAMGASGMLEGLEMKPTMALPHVAAQTDANVKPSTRSKAGKNVESETPAGATELKDAAKPKSSTAKSSAGKGATDVSTDCNALSESTQADVKPAKGKGKQPAANKTQKSADVKPEPPSTPLKDNNNNINNGGSGSAAPGSPRRPDRLVPQGSEYTVHHDFNVKLNQTNVGGNNNKFYFIQLLTRNGGYFVWTRWGRVGEDGQNQMQSFGNDEVAAIKLFEKKFREKTQNAWHARDVFVKYDGKYQLVETDEAAEGNDNSVPLGKLTQAQIEKGQAVLARLESAITKGSVRELDALSSEFYSLIPTDFGRRRPEAISTVDGVREKEELLKFYLRMGFEDMKEEPGLTPIDGIMALPVPKTLAAAAAGICDGASVKSSTRKGDELAKSQAGSPVKPMGAEMYAALMLYTSNAIYRQLNQVLRDEKRAAVKRYFNYLRLFLEAMSHLPPQKRTLWRGISVDLSAQYAVGSTITWWGVSSCTSDKSVAENFMRGCGGKCTLLTVETKTAIDISSITFYSNEKESLLAPGTQLFVESLTVVGNISYVHLKEVGRVIG* # PASA_UPDATE: g8918.t1, single gene model update, valid-1, status:[pasa:asmbl_9633,status:12], valid-1 NODE_841_length_17004_cov_41.3415 . gene 15976 16901 . - . ID=g8918;Name=g8918.t1 NODE_841_length_17004_cov_41.3415 . mRNA 15976 16901 . - . ID=g8918.t1;Parent=g8918;Name=g8918.t1 NODE_841_length_17004_cov_41.3415 . five_prime_UTR 16852 16901 . - . ID=g8918.t1.utr5p1;Parent=g8918.t1 NODE_841_length_17004_cov_41.3415 . exon 16777 16901 . - . ID=g8918.t1.exon1;Parent=g8918.t1 NODE_841_length_17004_cov_41.3415 . CDS 16777 16851 . - 0 ID=cds.g8918.t1;Parent=g8918.t1 NODE_841_length_17004_cov_41.3415 . exon 15976 16392 . - . ID=g8918.t1.exon2;Parent=g8918.t1 NODE_841_length_17004_cov_41.3415 . CDS 16120 16392 . - 0 ID=cds.g8918.t1;Parent=g8918.t1 NODE_841_length_17004_cov_41.3415 . three_prime_UTR 15976 16119 . - . ID=g8918.t1.utr3p1;Parent=g8918.t1 #PROT g8918.t1 g8918 MPSKRQKTEETLVLIPEDQFAAAHAEPVAVSVQCPTYGEWGLTGQTVTVTMSVRESVTALKQRIQDQLGMPSAKQKLQVKGVFLKDNLSLAYYNIGGAGAVPVVLSVKERGGRKK* # ORIGINAL: g6737.t1 original gene structure, not modified by PASA NODE_887_length_16244_cov_40.2398 AUGUSTUS gene 9623 13496 . + . ID=g6737;Name=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS mRNA 9623 13496 . + . ID=g6737.t1;Parent=g6737;Name=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 9623 9662 . + . ID=g6737.t1.exon1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 9623 9662 . + 0 ID=cds.g6737.t1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 10107 10535 . + . ID=g6737.t1.exon2;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 10107 10535 . + 2 ID=cds.g6737.t1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 10991 11283 . + . ID=g6737.t1.exon3;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 10991 11283 . + 2 ID=cds.g6737.t1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 11851 11892 . + . ID=g6737.t1.exon4;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 11851 11892 . + 0 ID=cds.g6737.t1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 12424 12619 . + . ID=g6737.t1.exon5;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 12424 12619 . + 0 ID=cds.g6737.t1;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 12925 13496 . + . ID=g6737.t1.exon6;Parent=g6737.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 12925 13496 . + 2 ID=cds.g6737.t1;Parent=g6737.t1 #PROT g6737.t1 g6737 MWGGQAWAGAAPDAPSTDADAASVWAARALQFAQMREQGLIPDTPHVDQSQSQDHGHHPQHASQQQQQQQQQQHYHAHHPPDYGAYAQQGHPGHPGFGMHPGVPLPYGAAPPYVDYGVQAQLHGSYFPPDMGFAPVDDGSGGQMHPGFVPPLPPDDGFRPVEPSRARLPAWLRDELIKKESKERGKKGAPDAPILPYLAAGGGVSVSVHPGHHTMIGAAATAPAVNVRAISGYQMASRSPSPVSEAEAEESAKEESESEDEEEKQAQALMAIRRMLTEVLLDVTNASIRGAVTEAVAECAREKDAREHTARTPRVVASMAVDARSVEPAVVLKGLLAYDSEDDDGDSDDGSCVIAPPTASIQDAHAHDTSLHDVRHSATLRPPSAPTQHGAASVCTPAPSDHSLPAPSAPATVTDTIVLKSGDLRGTRDIHPSPTPRASSDIRGRSRSPERDRRSASGRRRSRSRDAHGGRRRSRSRSRGRSSRDEGGHRGDDADVRNSSRSARRGRSKSLSRSPPSRDRARR* # PASA_UPDATE: g6734.t1, single gene model update, valid-1, status:[pasa:asmbl_9832,status:12], valid-1 NODE_887_length_16244_cov_40.2398 . gene 416 2843 . + . ID=g6734;Name=g6734.t1 NODE_887_length_16244_cov_40.2398 . mRNA 416 2843 . + . ID=g6734.t1;Parent=g6734;Name=g6734.t1 NODE_887_length_16244_cov_40.2398 . exon 416 574 . + . ID=g6734.t1.exon1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . CDS 416 574 . + 0 ID=cds.g6734.t1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . exon 1168 1389 . + . ID=g6734.t1.exon2;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . CDS 1168 1389 . + 0 ID=cds.g6734.t1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . exon 1622 1828 . + . ID=g6734.t1.exon3;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . CDS 1622 1828 . + 0 ID=cds.g6734.t1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . exon 2137 2322 . + . ID=g6734.t1.exon4;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . CDS 2137 2322 . + 0 ID=cds.g6734.t1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . exon 2598 2843 . + . ID=g6734.t1.exon5;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . CDS 2598 2747 . + 0 ID=cds.g6734.t1;Parent=g6734.t1 NODE_887_length_16244_cov_40.2398 . three_prime_UTR 2748 2843 . + . ID=g6734.t1.utr3p1;Parent=g6734.t1 #PROT g6734.t1 g6734 MEGHSKGKGPDTADKGRRKRARSEADPAASEAADASDASDASNASDSDADTAVNETVNLEFTAYAPKEGDYYGIKHLLQQVFANTPVNLTELADLIVAQSHVGSVVKILDEETVYGVFTVINLHEHKDKECVRQIKTHLLSQCKDDAVKQRTAAILESSAQPSGLIISERFVNVPPDVAPPLHTALATEMADARKKGEAFSFGHLVFIMKAYTEIAERVTSADGERDLSKLAKKMRKMSKKNAAEMNFINAEDELVQQMSDLSFTYRVKGESSQFLDETKVHLQRVVCTLPFARHAQLMAAIEAVIV* # ORIGINAL: g6736.t1 original gene structure, not modified by PASA NODE_887_length_16244_cov_40.2398 AUGUSTUS gene 5744 7288 . - . ID=g6736;Name=g6736.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS mRNA 5744 7288 . - . ID=g6736.t1;Parent=g6736;Name=g6736.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 6101 7288 . - . ID=g6736.t1.exon1;Parent=g6736.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 6101 7288 . - 0 ID=cds.g6736.t1;Parent=g6736.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 5744 5806 . - . ID=g6736.t1.exon2;Parent=g6736.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 5744 5806 . - 0 ID=cds.g6736.t1;Parent=g6736.t1 #PROT g6736.t1 g6736 MVVSMNACNPKEALARQAEVAAAALSSSSATGEKSNAPFSNETPIVLKDKLVVLKRDILRLYFAAEDQEDPAEQRLAARLLMEARVDDMYAAHMRKKERATKAAESLMAGYDLAEELRVARAKRKRWTPDEDALLRWSYSHWETAVPDHNTRAMGFGCRGRNQFAAMMLRLLQEGHIEMDSDGEPRAVLDICTALLDPANVDMKRPRFRWSVIHRSSVKRSADVDLRFMQLQMERALDGPRDPPRDVADTDVAPPDDRMLERLVDGEPDAVEAAREAHARDVLARKEKLERLARTMQRGGERASRNTAVGKGGGVAAAPVAKSGTPARQAGARITPTDTEPQTASPSDRVSLKTKTGSSGPLFPELREPLRPRLPAMNDVHAEAEAVDSVHAAAEARYQDPLLYGSCESRATRMAM* # ORIGINAL: g6738.t1 original gene structure, not modified by PASA NODE_887_length_16244_cov_40.2398 AUGUSTUS gene 13941 15195 . - . ID=g6738;Name=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS mRNA 13941 15195 . - . ID=g6738.t1;Parent=g6738;Name=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 14976 15195 . - . ID=g6738.t1.exon1;Parent=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 14976 15195 . - 0 ID=cds.g6738.t1;Parent=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 14345 14632 . - . ID=g6738.t1.exon2;Parent=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 14345 14632 . - 2 ID=cds.g6738.t1;Parent=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 13941 14053 . - . ID=g6738.t1.exon3;Parent=g6738.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 13941 14053 . - 2 ID=cds.g6738.t1;Parent=g6738.t1 #PROT g6738.t1 g6738 MDCPPEPFAGPARGLVTARIKHFQEAPTPQEKQSVKEGHGAVSQRQRQQGPSNIAAIAAALEKDANETRQLKGGLLRRETSGDKASTAAQQEDGEKPGVNPASTPGINKPSGKRKRTDAEGAGDGATTRLSESVRSGARVVQSAVALADIIRANAPAVGVDTRTAGPDKDTCDEDARARRTKYARKMHMAGLRSRGLGEPGDGDGV* # ORIGINAL: g6739.t1 original gene structure, not modified by PASA NODE_887_length_16244_cov_40.2398 AUGUSTUS gene 15671 15979 . + . ID=g6739;Name=g6739.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS mRNA 15671 15979 . + . ID=g6739.t1;Parent=g6739;Name=g6739.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 15671 15979 . + . ID=g6739.t1.exon1;Parent=g6739.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 15671 15979 . + 0 ID=cds.g6739.t1;Parent=g6739.t1 #PROT g6739.t1 g6739 MGIYGTILAAIHMLLSTYELALHLWEVGANHVETLVWGRTPTCATVQSDTRRLKKIPRHIALVLEEDELSMEDIAYMICWSLASGIGAVSVYDSAGSCLRWA* # ORIGINAL: g6735.t1 original gene structure, not modified by PASA NODE_887_length_16244_cov_40.2398 AUGUSTUS gene 3743 5434 . - . ID=g6735;Name=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS mRNA 3743 5434 . - . ID=g6735.t1;Parent=g6735;Name=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 5338 5434 . - . ID=g6735.t1.exon1;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 5338 5434 . - 0 ID=cds.g6735.t1;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 4746 4948 . - . ID=g6735.t1.exon2;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 4746 4948 . - 2 ID=cds.g6735.t1;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 4156 4493 . - . ID=g6735.t1.exon3;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 4156 4493 . - 0 ID=cds.g6735.t1;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS exon 3743 3959 . - . ID=g6735.t1.exon4;Parent=g6735.t1 NODE_887_length_16244_cov_40.2398 AUGUSTUS CDS 3743 3959 . - 1 ID=cds.g6735.t1;Parent=g6735.t1 #PROT g6735.t1 g6735 MSYALEMNGGLIAVTVLLGIALAIYTLVAYKRGWFKWDAVNTRALLDSHVLSRAWLFVVRLAICAYALWVVVYGLLVPDLEGELSFYTMWNILSLETYFLFIVLYSVWHHFIGTTHPLVERVLWVLFETNATMVILVDVVVWTILYPDLKSKGEEDGVLNLSSYHMHGVNFLYMAIELVLNKIPVAPAHALFPVLWGLSYGVFSWIYYTHSGIWRYFFLDTAPASAPGWYLGVCALHVVFFFLVFGADRLKSYVVSRRAARRDQERLSEQQYLIADGGVCDDDV* # ORIGINAL: g11953.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 9850 13507 . + . ID=g11953;Name=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 9850 13507 . + . ID=g11953.t1;Parent=g11953;Name=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 9850 10087 . + . ID=g11953.t1.exon1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 9850 10087 . + 0 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 10306 10383 . + . ID=g11953.t1.exon2;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 10306 10383 . + 2 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 10749 11023 . + . ID=g11953.t1.exon3;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 10749 11023 . + 2 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 11402 11987 . + . ID=g11953.t1.exon4;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 11402 11987 . + 0 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 12186 12466 . + . ID=g11953.t1.exon5;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 12186 12466 . + 2 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 12572 12799 . + . ID=g11953.t1.exon6;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 12572 12799 . + 0 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 13075 13276 . + . ID=g11953.t1.exon7;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 13075 13276 . + 0 ID=cds.g11953.t1;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 13419 13507 . + . ID=g11953.t1.exon8;Parent=g11953.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 13419 13507 . + 2 ID=cds.g11953.t1;Parent=g11953.t1 #PROT g11953.t1 g11953 MADYDSDGIYETSADVDAICDDIAGSLDFDDIDVGAARLLEESIHGNVVQALEDYERGVRRPSMTGQMDDDDDESEQPKDGTEEPEEAIAWLQEAGFTEYVNLFKENRITDESMLEQDAEHLTDFQFEAVRKRVQSLNRTIKRKAMNSELDGTAAAAAAGGSQRRVSGDKLVPGNRTSTVKPSPSTTSLGSPSGTCTLIAEDPNAPLPEQLSRRRLSRQPVTTAPTRRVFDLTSDESDEVRRFALAQLTGLMESSVGKMPYKRKKAHQVRNFFQHKIADKQHKKIKDGAVFGVSLEALLEREGNRVRVPPFLNRMLDYLTVSALGIEGIFRKVGSQSRIRELKDKCEEMGGVVDFEALSRPHDVAALLKTWLRELPQALLTEDLSETFCAVHAVAREYQLQAMQLLVILLPAAHTAVLHALLAFLHRVAERADLNKMGVSNLAVVFAPNLFHNKNFKDGDPRERDAQVAMSAAVKVMIDNYDKLWTVPSDVLSQMNNAQESRRARKFSKARKQLKGSIDSENPPLMRSQSSSKDLTSGAGITITLAADAEANAMKTTTWLSESEQKDSSSAPRAIVRVELPSLNTEMTRKAILLGDATTVANVVMNAMKHLGDSFEQVKWCLVEIGSDGADRRLYDDDNMLRIIKHNPNARYIVRERV* # PASA_UPDATE: g11957.t1, single gene model update, valid-1, status:[pasa:asmbl_4852,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 21128 23153 . - . ID=g11957;Name=g11957.t1 NODE_26_length_60952_cov_42.1754 . mRNA 21128 23153 . - . ID=g11957.t1;Parent=g11957;Name=g11957.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 23123 23153 . - . ID=g11957.t1.utr5p1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 23050 23153 . - . ID=g11957.t1.exon1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 23050 23122 . - 0 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 22797 22929 . - . ID=g11957.t1.exon2;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 22797 22929 . - 2 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 22473 22596 . - . ID=g11957.t1.exon3;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 22473 22596 . - 1 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 22189 22251 . - . ID=g11957.t1.exon4;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 22189 22251 . - 0 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 21934 22040 . - . ID=g11957.t1.exon5;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 21934 22040 . - 0 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . exon 21128 21578 . - . ID=g11957.t1.exon6;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . CDS 21332 21578 . - 1 ID=cds.g11957.t1;Parent=g11957.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 21128 21331 . - . ID=g11957.t1.utr3p1;Parent=g11957.t1 #PROT g11957.t1 g11957 MAAAKQDEEDLLSSEEEDEEYAPSDAASDSDSPAADTDDDLAVQGNALATGPRTKRKRADDALHKSAKRDSAASAELKADENPEKKARIESLWDSFKKDVAPPKAAVVSTAPSELPPKKPSRFASMGIGATASSAVEAPKTVTKTFSFAGETISVTEKVSSSTQQQKPAPPKSALDDILSKFKPPKISTLEKSRLDWQTFKQAEGIDDELTHHNKDGYLEKKAFLDRADERQWETERAHRMGPGRRAT* # ORIGINAL: g11952.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 8107 9130 . - . ID=g11952;Name=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 8107 9130 . - . ID=g11952.t1;Parent=g11952;Name=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 9049 9130 . - . ID=g11952.t1.exon1;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 9049 9130 . - 0 ID=cds.g11952.t1;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 8620 8654 . - . ID=g11952.t1.exon2;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 8620 8654 . - 2 ID=cds.g11952.t1;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 8427 8470 . - . ID=g11952.t1.exon3;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 8427 8470 . - 0 ID=cds.g11952.t1;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 8107 8335 . - . ID=g11952.t1.exon4;Parent=g11952.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 8107 8335 . - 1 ID=cds.g11952.t1;Parent=g11952.t1 #PROT g11952.t1 g11952 MSGFMGSIPKGQNAPLQQPQQQQQAAPDAGGPLAQGDIEDLGGGRSCVKCPWHSYRIVLETGEGLFEKIDPYNKASRPQTCSKGPRQRTHKVKVDAEGIYVAINNNPPALPSDEYAVPKAAPKVPTAKQ* # ORIGINAL: g11960.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 27679 32243 . - . ID=g11960;Name=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 27679 32243 . - . ID=g11960.t1;Parent=g11960;Name=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 32178 32243 . - . ID=g11960.t1.exon1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 32178 32243 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 31942 32037 . - . ID=g11960.t1.exon2;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 31942 32037 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 31731 31815 . - . ID=g11960.t1.exon3;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 31731 31815 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 31068 31546 . - . ID=g11960.t1.exon4;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 31068 31546 . - 2 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 29678 30922 . - . ID=g11960.t1.exon5;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 29678 30922 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 29114 29521 . - . ID=g11960.t1.exon6;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 29114 29521 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 28444 28959 . - . ID=g11960.t1.exon7;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 28444 28959 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 28070 28298 . - . ID=g11960.t1.exon8;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 28070 28298 . - 0 ID=cds.g11960.t1;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 27679 27842 . - . ID=g11960.t1.exon9;Parent=g11960.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 27679 27842 . - 2 ID=cds.g11960.t1;Parent=g11960.t1 #PROT g11960.t1 g11960 MAPKIDVAKFHRRLDSLYSAWKASGTDGSFKGADAIVIPAGTDSVMFQKTATLQMWLLGYEFPKTITVFGADTVTILASQEKVNILKQVESGAKSGSPRIEFLILSKESNTENFAKLEAAVRKSAGGKIVGAFEKDEVTGELAEQWNAFVRAEGKGFTFVDVAGIVSELVAVKDAAELDEIRASAKATAAFMKRVFIPHMEDIVDANKKVTHAAFSDYLSKVQEEMTEKKTQAKHSKLAAVEVDWEAAEWCYEPFVQSGGKYALRPTAVSDKELVHPKVIVGSLGIRCNDYCSNVARTFFMNPSEEQKAVYKVLIDARNAAIAALKPGAPISDAYNAAVAVVRTKKPELEAKMTKNIGFGMGLLFRETSQLIDGKNSRLVEPGMCFNVALGFDGLERPDAADERGKKYATYVADTVIVELAPVKGANGVEQLQTIATSGASLSTEYVIEDEGADADKAGPADAGDQQVTRGRREAAKKASASAVDGDANGEEAQKRQEELIRKKNDEARRRVIGGLGGAGGQAAASTAVSYKSLSAVPQTAPEVREQRPFLDVNAKTLLLPMFGYLVPFHISMVKSVVKGDEAKAATLRVNFVTPGIAVQKGTADASAASIYIRELTLRGSDAKHYTHVAENFKDAQKKFKAAETERKEQADLISQPALIMSRARREDIPRLNELTIRPNIGRGKVFGSLEAHINGFRFTTTKNDKLDIIYTNIRHAIFQPCEREERVLIHLHLFNPILVEKKKHKDITFMQEVIGFDETDNSRRRRNFADRDELEAEKQDRLRRQKINRMFKEFCEQVQRLCEKDKNQHGCDLKFDMPFRDLAFTGVPNKSNVVMMPTAYCLVSLIEPPPFLVSLDDIELVYFERVQLALKSFDMVIIYKDYTRPVTTITSIPMQRLEGQDGVKQWLNETDIRYEEGPVNLNWPKIMKTIVADPKDFFDLGGWDIRYGEFWDDILQRAPEQRGTTGGGDADAADSDEEMMSSDGEFAVEESSEEEEEEEEDGSSDDYDEDDEDSDEDEDEEEEEEEEGKTWEELEEEARRADMEQFGEDDRKRGRYSEDEDSDDDRPKKKAKPAAPTKKAAPAAKGKPAPARRR* # PASA_UPDATE: g11966.t1, single gene model update, valid-1, status:[pasa:asmbl_4853,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 45752 48275 . - . ID=g11966;Name=g11966.t1 NODE_26_length_60952_cov_42.1754 . mRNA 45752 48275 . - . ID=g11966.t1;Parent=g11966;Name=g11966.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 47955 48275 . - . ID=g11966.t1.utr5p1;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . exon 47949 48275 . - . ID=g11966.t1.exon1;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . CDS 47949 47954 . - 0 ID=cds.g11966.t1;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . exon 46334 47792 . - . ID=g11966.t1.exon2;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . CDS 46334 47792 . - 0 ID=cds.g11966.t1;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . exon 45752 46042 . - . ID=g11966.t1.exon3;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . CDS 45876 46042 . - 2 ID=cds.g11966.t1;Parent=g11966.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 45752 45875 . - . ID=g11966.t1.utr3p1;Parent=g11966.t1 #PROT g11966.t1 g11966 MKHVENALRVFESPGKKAVYCLEVVDDVLYAGAADNKIRSYNILTGAIMHTYAAHTNYVTCIRAQKGTIPPPLHSASGTQATATATAPAAAPSVVGTAQSTQAAQTAQATPTSGIATVDVLLFSGSNDKTARLWDAMTGQCVRVFKKGHSSHIYTVCPDPSGQRLFTGGGDNVIVEWSVATEERVRLFKGHTDWVRDMQIVGKFLYSGSNDATIRKWDIDTGSCVHSYPGHNRIFCVCVSGDKIFAGSSDKLVRAVDRETGAFVREFSGHKGPVLCLQATSGGDILTSSGDKCVRQWDVRTGECITLFKGHSDWVRAVRYCRGVVFSGGDDGYIRMWSVYGDSTPADSAFGGSSIMSQTQLYMAAQGVGAPAMEYDRRSIASSSSRLSLGSQFMSGAGPSGITAAVHAMASGVPNGATGGGAVSRALLEAHDLHTRRINELEAINYDQLKIISALEYQREIHLKEEMAWAAEKATLTEQIRALQTSLKDVILQAPEASRVVLKNIGLARQCLDDIEFEVRHKRRTSTATSSISEDGDVADDEA* # PASA_UPDATE: g11965.t1, single gene model update, valid-1, status:[pasa:asmbl_4844,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 42227 45655 . + . ID=g11965;Name=g11965.t1 NODE_26_length_60952_cov_42.1754 . mRNA 42227 45655 . + . ID=g11965.t1;Parent=g11965;Name=g11965.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 42227 42467 . + . ID=g11965.t1.utr5p1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 42227 42551 . + . ID=g11965.t1.exon1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 42468 42551 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 42753 43019 . + . ID=g11965.t1.exon2;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 42753 43019 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 43169 43382 . + . ID=g11965.t1.exon3;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 43169 43382 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 43635 43711 . + . ID=g11965.t1.exon4;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 43635 43711 . + 2 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 43914 44162 . + . ID=g11965.t1.exon5;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 43914 44162 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 44329 44436 . + . ID=g11965.t1.exon6;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 44329 44436 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 44773 44975 . + . ID=g11965.t1.exon7;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 44773 44975 . + 0 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . exon 45293 45655 . + . ID=g11965.t1.exon8;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . CDS 45293 45593 . + 1 ID=cds.g11965.t1;Parent=g11965.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 45594 45655 . + . ID=g11965.t1.utr3p1;Parent=g11965.t1 #PROT g11965.t1 g11965 MSKGKGDALYPRVDSIDAVVDYVPDPQNDSEDPLLPSGAQPYILYKSRWLMLFIVCLLNISNAAFWISYSPIADITSAYYDKSLTLVNLLSQIFMICYIPLGFSSSWALDARGLRFGVLIGAVLNFIGGWVRYASEFAPSRDGSFAVLFFGQTLAACAQPFILNAPTKLAAVWFGEKERATANTIASVSNPLGVAIASVLAPVIVDTGKDIATMNWIFAIPASVCVVIAVAFLRDAPPTHPSASAEDVSDSFSVGLRKLIHNRHYLLLLCAFGIGVGIFNAVSTLLEQIVLPHGYNKDDAGYLGALVIGFGLVGAGITGPLVDKTQKYKQVLKVAFVMAVGTFVWFALASRKSHAFVPLAISCALMGICCFSILPVCLELSVECTYPISEGTSAGFLWMAGQVFGVAFIFVMNALKSGPNDDMDHSNWFMVGMGGLAMIAALCFNGNYHRIDHEVRRASIASEQTQYRTGSMSSPSRSPALSHVSVSVNNIGNGADKTKA* # PASA_UPDATE: g11954.t1, single gene model update, valid-1, status:[pasa:asmbl_4838,status:12],[pasa:asmbl_4850,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 14423 16919 . - . ID=g11954;Name=g11954.t1 NODE_26_length_60952_cov_42.1754 . mRNA 14423 16919 . - . ID=g11954.t1;Parent=g11954;Name=g11954.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 16856 16919 . - . ID=g11954.t1.utr5p1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . exon 16532 16919 . - . ID=g11954.t1.exon1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . CDS 16532 16855 . - 0 ID=cds.g11954.t1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . exon 15884 16343 . - . ID=g11954.t1.exon2;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . CDS 15884 16343 . - 0 ID=cds.g11954.t1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . exon 15334 15479 . - . ID=g11954.t1.exon3;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . CDS 15334 15479 . - 2 ID=cds.g11954.t1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . exon 14423 14928 . - . ID=g11954.t1.exon4;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . CDS 14653 14928 . - 0 ID=cds.g11954.t1;Parent=g11954.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 14423 14652 . - . ID=g11954.t1.utr3p1;Parent=g11954.t1 #PROT g11954.t1 g11954 MLAGLFAFVWGLFAAARVLLFGPKRVQPKFDLGDVDYRRGDMRLQELTPKATGLRYCVIGAGYLGQTLVRALLARGETSIVAMDVVVPKDLATHPLVKFVKGNMTRAEDLNAVLSGGIDVVYLTAAVIRFSERLPHQLAYSYNINVLGTKNVIAACIKHNVPMLIQTSTSNVSIGLREARTNMDERNPYSSPPFINHYTCTKIDAEKAVLLANGAKLTNGGLLTTGVIRPCSGIFGHADPFILGRALKEGKSQMTSPDQIIDNVYVENVVLGHLLLERALHTKPEEISGQPFCISNNDPIRQYDFYCMLKHFYPQLEFSTVPPVLTILLATVSEAVQFVFRGRVSLGQLDMLTLATLNLTIINYTFVSDKAKRLLGYVPAYTVAEGVQKSVAEYVKDVKRV* # PASA_UPDATE: g11970.t1, single gene model update, valid-1, status:[pasa:asmbl_4847,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 59438 60798 . + . ID=g11970;Name=g11970.t1 NODE_26_length_60952_cov_42.1754 . mRNA 59438 60798 . + . ID=g11970.t1;Parent=g11970;Name=g11970.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 59438 59539 . + . ID=g11970.t1.utr5p1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . exon 59438 59765 . + . ID=g11970.t1.exon1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . CDS 59540 59765 . + 0 ID=cds.g11970.t1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . exon 59972 60055 . + . ID=g11970.t1.exon2;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . CDS 59972 60055 . + 2 ID=cds.g11970.t1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . exon 60188 60239 . + . ID=g11970.t1.exon3;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . CDS 60188 60239 . + 2 ID=cds.g11970.t1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . exon 60344 60443 . + . ID=g11970.t1.exon4;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . CDS 60344 60443 . + 1 ID=cds.g11970.t1;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . exon 60686 60798 . + . ID=g11970.t1.exon5;Parent=g11970.t1 NODE_26_length_60952_cov_42.1754 . CDS 60686 60798 . + 0 ID=cds.g11970.t1;Parent=g11970.t1;3_prime_partial=true #PROT g11970.t1 g11970 MTTAARATFHAAKGAAPRELVHSIQYSSRDVAAHTKLKTRQSGQDNADDLHQRDLKAELIELERNARDKRNKESGGRVRAREDSRDDDERGGQKRLRLVDDATARLDADDADISEDKSEEEDDADSDDDEDETAELMRELEKIRKERAEEQARKESERLADEDKVRKDYLMKGNPLLNAQHVPGDFKIKRR # ORIGINAL: g11963.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 36480 38131 . + . ID=g11963;Name=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 36480 38131 . + . ID=g11963.t1;Parent=g11963;Name=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 36480 36910 . + . ID=g11963.t1.exon1;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 36480 36910 . + 0 ID=cds.g11963.t1;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 37053 37200 . + . ID=g11963.t1.exon2;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 37053 37200 . + 1 ID=cds.g11963.t1;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 37360 37529 . + . ID=g11963.t1.exon3;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 37360 37529 . + 0 ID=cds.g11963.t1;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 37936 38131 . + . ID=g11963.t1.exon4;Parent=g11963.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 37936 38131 . + 1 ID=cds.g11963.t1;Parent=g11963.t1 #PROT g11963.t1 g11963 MSLLPIECLRLPKTAHGETAIQRDGVGVCSDDSEHGFPQILMRISQLRELWISVGAPFCFTWPSEAFCDTVSRAPTPDQRCIAVSSASTDGRNEDNPHSTCTAEYARIRALVLRDAPSSNAMLLSIAALSDLRVLDVQGAWAVTNEVVEHLSGLASLVWLNVAATSVKLTRSFVDSILVRFKSLSLLDATRCEYREIPTHVLNRFKTDLNLKVKRKAVALLIKSAPHTLRDLFCDDVFHKHSDDWLRVGSERVYTRVIKSTEGGVVEWSRLRIICEPSLRPWTAAAEMGCLAAVDEQTEVDDVCAAAVKNGTFI* # PASA_UPDATE: g11967.t1, single gene model update, valid-1, status:[pasa:asmbl_4845,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 49554 54408 . + . ID=g11967;Name=g11967.t1 NODE_26_length_60952_cov_42.1754 . mRNA 49554 54408 . + . ID=g11967.t1;Parent=g11967;Name=g11967.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 49554 49748 . + . ID=g11967.t1.utr5p1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 49554 49824 . + . ID=g11967.t1.exon1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 49749 49824 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 49916 49938 . + . ID=g11967.t1.exon2;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 49916 49938 . + 2 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 50083 50202 . + . ID=g11967.t1.exon3;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 50083 50202 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 50439 50560 . + . ID=g11967.t1.exon4;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 50439 50560 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 50743 50869 . + . ID=g11967.t1.exon5;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 50743 50869 . + 1 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 51195 51255 . + . ID=g11967.t1.exon6;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 51195 51255 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 51346 51473 . + . ID=g11967.t1.exon7;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 51346 51473 . + 2 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 51743 51908 . + . ID=g11967.t1.exon8;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 51743 51908 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 52230 52359 . + . ID=g11967.t1.exon9;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 52230 52359 . + 2 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 52512 52678 . + . ID=g11967.t1.exon10;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 52512 52678 . + 1 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 52997 53040 . + . ID=g11967.t1.exon11;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 52997 53040 . + 2 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 53482 53604 . + . ID=g11967.t1.exon12;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 53482 53604 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . exon 54097 54408 . + . ID=g11967.t1.exon13;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . CDS 54097 54156 . + 0 ID=cds.g11967.t1;Parent=g11967.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 54157 54408 . + . ID=g11967.t1.utr3p1;Parent=g11967.t1 #PROT g11967.t1 g11967 MATLVRGLDGGFGDDSGAQAEEVLRERTSLDMEVMPGKGVGPFVLGMPVGAAIGFLRKHFRTINNVELKYSDANPTALALVINLADEGIQLRFDPASQRLKMVEVYDLGKTKLSYCGTRFCDGATEATFVAVYRLFGPSHPGDYDPGRQQYCLNYPGLAFIFPIPTKHESLYARGEAELPIEFPDGTTPIASRLCVYAGGNVRDPQMPEQGPIDYIFEEVHVDVNSGLYFTRRRRAISFGDSCQDVISEIGPPSKIFYKDEDKMKIHARAGSTEDTRCSDYFYNYFDLGIDVLFDGARHVAKKFVLHTNSPGHFDFNRYVKCNFRILRGGEASDEADAAVASEERLVDVPAPSTSSPSRRPPGDRRRPSAESGGSATLNEFVVDPDTKWDDVLVNFGKPIGKPVVFKRGSSSNPFGATFFYGYQQLIFEVMRNNHIASVTIFLDAEGA* # ORIGINAL: g11964.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 38610 41300 . - . ID=g11964;Name=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 38610 41300 . - . ID=g11964.t1;Parent=g11964;Name=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 40653 41300 . - . ID=g11964.t1.exon1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 40653 41300 . - 0 ID=cds.g11964.t1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 40396 40485 . - . ID=g11964.t1.exon2;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 40396 40485 . - 0 ID=cds.g11964.t1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 40145 40219 . - . ID=g11964.t1.exon3;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 40145 40219 . - 0 ID=cds.g11964.t1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 39492 39857 . - . ID=g11964.t1.exon4;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 39492 39857 . - 0 ID=cds.g11964.t1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 38924 39171 . - . ID=g11964.t1.exon5;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 38924 39171 . - 0 ID=cds.g11964.t1;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 38610 38766 . - . ID=g11964.t1.exon6;Parent=g11964.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 38610 38766 . - 1 ID=cds.g11964.t1;Parent=g11964.t1 #PROT g11964.t1 g11964 MLRRLSNAVSSLQNLAISPFSSKKNTPTTSADTTPTSTAPPSPLISARALDESVDLTDVAPSIRKQAFHCDNNWRKNSAPAVIVNPLKLKKKHSGMDAPSNLVQHDPSSLSSSQSSSSSRSGNPFAFRKGSDGVEEALAAAGGVKTQSQSLLTLARGSGARTTATRDDSSLGLILSVPMSDRSKQRRMSYQVDMSESDFYSVGEAMAPTRRFATEELIGPYVVKKTIGNGSFSKVKLGTHLKTKEKVAIKFVSKNRDGDVVQVAREVALLQRLSHPNIIAVLDILETPESICLVLEYAPHSLLEYINSYGMSNRLPEKETRRVFKQLIMGVGYLHDCGVVHRDLKPENVLLDEAKNVKIIDFGLSKGNAGQREMLETACGSGMYAAPEMINRPKYAGRPADMWSVGVILFNMLTGRMPFTEKNAAPLPPHVLYQHAERLSLRLPSRLSAEASDLLTRLMCVNPHIRASIDDVRSHPWFRNKEMSLPTLVVTGTTTPESGDDGSAPEAAQSTASPPDTLEECDVSSVH* # PASA_UPDATE: g11961.t1, single gene model update, valid-1, status:[pasa:asmbl_4843,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 32761 33966 . + . ID=g11961;Name=g11961.t1 NODE_26_length_60952_cov_42.1754 . mRNA 32761 33966 . + . ID=g11961.t1;Parent=g11961;Name=g11961.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 32761 32842 . + . ID=g11961.t1.utr5p1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 32761 32845 . + . ID=g11961.t1.exon1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 32843 32845 . + 0 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 32932 33012 . + . ID=g11961.t1.exon2;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 32932 33012 . + 0 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 33100 33159 . + . ID=g11961.t1.exon3;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 33100 33159 . + 0 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 33279 33412 . + . ID=g11961.t1.exon4;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 33279 33412 . + 0 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 33502 33586 . + . ID=g11961.t1.exon5;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 33502 33586 . + 1 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . exon 33716 33966 . + . ID=g11961.t1.exon6;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . CDS 33716 33865 . + 0 ID=cds.g11961.t1;Parent=g11961.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 33866 33966 . + . ID=g11961.t1.utr3p1;Parent=g11961.t1 #PROT g11961.t1 g11961 MANKGNKRVLEVNKKVLANHFYPLVGINLFYILVRIFYFYDSFFFWDGVAFLFLAFVEFFCYKALADMATPEFAADGELLGAGMDLTFGGIAEYYKDVIYVTLFVQVGSIYSSRFLLFWLLIPIFALYKLWVGIIAPWIFAPAPEPMDEETKKKLEKKEKKANRVKYVSR* # PASA_UPDATE: g11956.t1, single gene model update, valid-1, status:[pasa:asmbl_4839,status:12],[pasa:asmbl_4841,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 19077 20683 . + . ID=g11956;Name=g11956.t1 NODE_26_length_60952_cov_42.1754 . mRNA 19077 20683 . + . ID=g11956.t1;Parent=g11956;Name=g11956.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 19077 19086 . + . ID=g11956.t1.utr5p1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . exon 19077 19201 . + . ID=g11956.t1.exon1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . CDS 19087 19201 . + 0 ID=cds.g11956.t1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . exon 19373 19553 . + . ID=g11956.t1.exon2;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . CDS 19373 19553 . + 2 ID=cds.g11956.t1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . exon 19728 19754 . + . ID=g11956.t1.exon3;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . CDS 19728 19754 . + 1 ID=cds.g11956.t1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . exon 19955 20035 . + . ID=g11956.t1.exon4;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . CDS 19955 20035 . + 1 ID=cds.g11956.t1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . exon 20131 20683 . + . ID=g11956.t1.exon5;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . CDS 20131 20422 . + 1 ID=cds.g11956.t1;Parent=g11956.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 20423 20683 . + . ID=g11956.t1.utr3p1;Parent=g11956.t1 #PROT g11956.t1 g11956 MSTRVYVGHVPSRARTQDLEDLFRRYGRIVNVDLKNGFAFVEFEDDRDAEDAIRALDGTNFEGDRIIVQAARSGRGGRDERGGDGKGNICFSCGRDGHWASDCPDAKVRTDCRSGLCFKCGESGHLARNCNGGGGGRGRSRSRSPRGRRSPSPRRDYDRRRSPSPPRGRRSPSPPRRRRSPSPPRARRSPSPPRGRRSPSPPRGRRSPSPPRRDFERRRSPSPRRDFSPRR* # PASA_UPDATE: g11969.t1, single gene model update, valid-1, status:[pasa:asmbl_4855,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 57064 59106 . - . ID=g11969;Name=g11969.t1 NODE_26_length_60952_cov_42.1754 . mRNA 57064 59106 . - . ID=g11969.t1;Parent=g11969;Name=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 58861 59106 . - . ID=g11969.t1.exon1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 58861 59106 . - 0 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 58508 58684 . - . ID=g11969.t1.exon2;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 58508 58684 . - 0 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 58287 58362 . - . ID=g11969.t1.exon3;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 58287 58362 . - 0 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 57851 58118 . - . ID=g11969.t1.exon4;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 57851 58118 . - 2 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 57444 57647 . - . ID=g11969.t1.exon5;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 57444 57647 . - 1 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . exon 57064 57252 . - . ID=g11969.t1.exon6;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . CDS 57120 57252 . - 1 ID=cds.g11969.t1;Parent=g11969.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 57064 57119 . - . ID=g11969.t1.utr3p1;Parent=g11969.t1 #PROT g11969.t1 g11969 MTTPQAPSAADASSTFSTSDHSHRRLNILSNTWIVCSPHRAKRPWQGQTESVTVADKPTYDPQCYLCPRNARTSGISNDDYSDTFVFPNDFSALQVDAPAGAVNDGDLLCAESTRGTCNVVCFSPNHGLTVAEMDDVGIRKVVDEWVRQFEALSKQFRYVQIFENKGAVMGCSNPHPHGQIWATDSIPEEVSKELKAFADWGHAHGGKCVLCEYATLEAARGERVVCSNDHFVAVVPYWAYWPFEVLVVPRRHVARITDLVEAERDSLASLLRRVCTRYDNLFCINFPYSMGIHQSPAPIDGDTREIHLHLHFYPPLLRSASVKKFLVGYEMVADLVRDITAEQAAERLRSLSETHYTRARDHGPAS* # PASA_UPDATE: g11951.t1, single gene model update, valid-1, status:[pasa:asmbl_4848,status:12],[pasa:asmbl_4849,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 1503 7165 . - . ID=g11951;Name=g11951.t1 NODE_26_length_60952_cov_42.1754 . mRNA 1503 7165 . - . ID=g11951.t1;Parent=g11951;Name=g11951.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 7064 7165 . - . ID=g11951.t1.utr5p1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 7024 7165 . - . ID=g11951.t1.exon1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 7024 7063 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 6704 6849 . - . ID=g11951.t1.exon2;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 6704 6849 . - 2 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 5312 6554 . - . ID=g11951.t1.exon3;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 5312 6554 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 4880 4978 . - . ID=g11951.t1.exon4;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 4880 4978 . - 2 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 4365 4702 . - . ID=g11951.t1.exon5;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 4365 4702 . - 2 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 3798 4084 . - . ID=g11951.t1.exon6;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 3798 4084 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 3577 3660 . - . ID=g11951.t1.exon7;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 3577 3660 . - 1 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 3286 3373 . - . ID=g11951.t1.exon8;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 3286 3373 . - 1 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 2927 3064 . - . ID=g11951.t1.exon9;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 2927 3064 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 2670 2773 . - . ID=g11951.t1.exon10;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 2670 2773 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 2201 2417 . - . ID=g11951.t1.exon11;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 2201 2417 . - 1 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . exon 1503 2001 . - . ID=g11951.t1.exon12;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . CDS 1747 2001 . - 0 ID=cds.g11951.t1;Parent=g11951.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 1503 1746 . - . ID=g11951.t1.utr3p1;Parent=g11951.t1 #PROT g11951.t1 g11951 MRQFFKAPLRWLGGDAKMDGAEPEWTPAKSTASMRRTRESKNVFAQIAAGQVHGNKMRRASQLPNPFVGALDARSAGVTTFLLNIESAEREIIPGRCEGWIKARAHLHTLMQHFNDASRFEQVEGYYGRLLPDGHVRQHPVDQFVQSGGVAVVARLLMRQEVLDAIAAGEGGMNDMQDALRQSFPALSVFQSSSTASSLHKTVILVATEALNVLQELALLVPEVPADLSCNDAFVLRLFALMACRTLFGQAIGLAEKILDQRPEMFGLASVPNLGALVGGFTGQQLASFCRVAALVVCDQEDYIYGDSLKAAKEAHAMNGGVLPLNGWVAEGDTSHSVGVRIAAVDGDSVGGGDVGDVDDSPMGGCSHGHGHGHVHGHGHGHGHVHGHGHGGNTHSHDHRAKPAASTVAVTSRRPAAHSCDFAAPSHVTMQIRRAKRTLKARTIEQNQAVLLGIPDFMNRLLKILSVESFLPVPLETIASLPGNALDSLDVLSRLLLIDGSPAHDWFDGIDLVGDRQGTDGDSDDDDGETARDAEYERLVQDLLSAPALARAAHDGSAPTPNVADSAEQTGAPNAQAPRAAQPDHFDVEPAALRMITMAMYHVEVLFVVCMMLGGRRKAEVQGLIGRLGGVPVLSRLFEKLDWERNHNIDEYMERMHGPNCECSPDSALKIQYLRLVHNLCDNAYDASVKRLLLTRSELATLDAIERGVASTGTVYDSRLRCQGSSGLLTKLARMLMKLKTDSPYKFWMSSSIESYLRGASVAERVLLSRTGLMKHIINEVTGDGFKKTGTMQSSFDLLGELMKFAPDMFALFDNYVTETELATIIQLMCTHIVDSNVFVRAMVVSVELFDELDKQGKLRGRIYPYNAKTCRMATQLRQRELRLRLLTALMNCVSIEDLSQENICCINTAVIFLIYAQRKGELSEYLDYLQGADRVSGVSSRASFSSLANFRNLLSFWRVYYLSRGRDCRSLELSSLIEFTEWRGVIDTLLGDGDLSIAKRLGSAHDNIVTH* # ORIGINAL: g11958.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 23690 24387 . + . ID=g11958;Name=g11958.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 23690 24387 . + . ID=g11958.t1;Parent=g11958;Name=g11958.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 23690 24029 . + . ID=g11958.t1.exon1;Parent=g11958.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 23690 24029 . + 0 ID=cds.g11958.t1;Parent=g11958.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 24131 24387 . + . ID=g11958.t1.exon2;Parent=g11958.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 24131 24387 . + 2 ID=cds.g11958.t1;Parent=g11958.t1 #PROT g11958.t1 g11958 MVAPTEVFKCIDCPPDAKAFVKSSIGKHAYIHSGDKMKCGKCGAEITSRAMSRHMKNPSAKAHASSTTTPIPRKKSQSARSRAVAAPYPGTTDHSATPSVALPSHAATSAHSHGYDAAGMDTPRQCLGTQYTSDLTQPCNNDNIDPNSWNDNNSVDETFQDNTTLLLDNFLHDMNQMSSTAPFLKDRRPDGIGSQGSI* # ORIGINAL: g11962.t1 original gene structure, not modified by PASA NODE_26_length_60952_cov_42.1754 AUGUSTUS gene 34482 35346 . + . ID=g11962;Name=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS mRNA 34482 35346 . + . ID=g11962.t1;Parent=g11962;Name=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 34482 34675 . + . ID=g11962.t1.exon1;Parent=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 34482 34675 . + 0 ID=cds.g11962.t1;Parent=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 34958 35041 . + . ID=g11962.t1.exon2;Parent=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 34958 35041 . + 1 ID=cds.g11962.t1;Parent=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS exon 35220 35346 . + . ID=g11962.t1.exon3;Parent=g11962.t1 NODE_26_length_60952_cov_42.1754 AUGUSTUS CDS 35220 35346 . + 1 ID=cds.g11962.t1;Parent=g11962.t1 #PROT g11962.t1 g11962 MAVARPSFTDLSLRAAAPVLGIERIGRRSQWEVQEAVDVVLCRGVLPLKNMCLKLVAQYYQSCESLEGLPTEFGDAILTTVLRTVPISLNFVRLLKAQSMPITRLDLSRAVRVDDAFIAPIAGLQTIAELNLAK* # PASA_UPDATE: g11950.t1, single gene model update, valid-1, status:[pasa:asmbl_4840,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 103 1502 . + . ID=g11950;Name=g11950.t1 NODE_26_length_60952_cov_42.1754 . mRNA 103 1502 . + . ID=g11950.t1;Parent=g11950;Name=g11950.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 103 103 . + . ID=g11950.t1.utr5p1;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . exon 103 175 . + . ID=g11950.t1.exon1;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . CDS 104 175 . + 0 ID=cds.g11950.t1;Parent=g11950.t1;5_prime_partial=true NODE_26_length_60952_cov_42.1754 . exon 344 437 . + . ID=g11950.t1.exon2;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . CDS 344 437 . + 0 ID=cds.g11950.t1;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . exon 582 680 . + . ID=g11950.t1.exon3;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . CDS 582 680 . + 2 ID=cds.g11950.t1;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . exon 944 1004 . + . ID=g11950.t1.exon4;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . CDS 944 1004 . + 2 ID=cds.g11950.t1;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . exon 1238 1502 . + . ID=g11950.t1.exon5;Parent=g11950.t1 NODE_26_length_60952_cov_42.1754 . CDS 1238 1502 . + 1 ID=cds.g11950.t1;Parent=g11950.t1;3_prime_partial=true #PROT g11950.t1 g11950 VGRQCRRRQRALFWHRRAQDGLHSHWKADQDGSSSGWIQFGNPLLQEQLCRWMAPGRHQSLPWPPHCEDQGRRAHWIGVCRQEFALPCVADDSPRWPVDVRPQPACSHTRGLAEAGVRRLLGRRPPAHLAHGALLRHGLCGHAPACSASVPPLCRKVRRYMRGLRQLLRNTRCGGSVCVGICQCVISTLEQEQAIWV # PASA_UPDATE: g11959.t1, single gene model update, valid-1, status:[pasa:asmbl_4842,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 25056 27079 . + . ID=g11959;Name=g11959.t1 NODE_26_length_60952_cov_42.1754 . mRNA 25056 27079 . + . ID=g11959.t1;Parent=g11959;Name=g11959.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 25056 25098 . + . ID=g11959.t1.utr5p1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 25056 25209 . + . ID=g11959.t1.exon1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 25099 25209 . + 0 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 25397 25502 . + . ID=g11959.t1.exon2;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 25397 25502 . + 0 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 25617 25669 . + . ID=g11959.t1.exon3;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 25617 25669 . + 2 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 25823 25929 . + . ID=g11959.t1.exon4;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 25823 25929 . + 0 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 26061 26148 . + . ID=g11959.t1.exon5;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 26061 26148 . + 1 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 26409 26554 . + . ID=g11959.t1.exon6;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 26409 26554 . + 0 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . exon 26786 27079 . + . ID=g11959.t1.exon7;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . CDS 26786 26816 . + 1 ID=cds.g11959.t1;Parent=g11959.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 26817 27079 . + . ID=g11959.t1.utr3p1;Parent=g11959.t1 #PROT g11959.t1 g11959 MSKEEEFEGLEGDGEETFAAGDEAADAKDAADELEDPELEAMKRRVQEMEEEARKLREMQNEVEKQMNMTAGASSDSKEEIDGRSIYVGNVDYASTPEELQNHFAACGTINRVTILTDKFTGHPKGFAYVEFADPEAVSNALALNESLFRGRQIKVTSKRTNQPGFGARGRGRGRGGYAPRGGRGFHGAPGGFYGTGPYRPRFRNRRAFFAPY* # PASA_UPDATE: g11968.t1, single gene model update, valid-1, status:[pasa:asmbl_4846,status:3], valid-1 NODE_26_length_60952_cov_42.1754 . gene 55771 56967 . + . ID=g11968;Name=g11968.t1 NODE_26_length_60952_cov_42.1754 . mRNA 55771 56967 . + . ID=g11968.t1;Parent=g11968;Name=g11968.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 55771 55826 . + . ID=g11968.t1.utr5p1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . exon 55771 55874 . + . ID=g11968.t1.exon1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . CDS 55827 55874 . + 0 ID=cds.g11968.t1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . exon 55997 56125 . + . ID=g11968.t1.exon2;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . CDS 55997 56125 . + 0 ID=cds.g11968.t1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . exon 56265 56387 . + . ID=g11968.t1.exon3;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . CDS 56265 56387 . + 0 ID=cds.g11968.t1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . exon 56539 56646 . + . ID=g11968.t1.exon4;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . CDS 56539 56646 . + 0 ID=cds.g11968.t1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . exon 56794 56967 . + . ID=g11968.t1.exon5;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . CDS 56794 56940 . + 0 ID=cds.g11968.t1;Parent=g11968.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 56941 56967 . + . ID=g11968.t1.utr3p1;Parent=g11968.t1 #PROT g11968.t1 g11968 MLAMNALSRAVRLHAQPLRCFASTSTCRVESSGATGSGESAPIRLGDAAEATRAFGRDEVAQFAALTGDFNPVHIDEAFAKTTRFGGCIVHGILVNSVVAGILGTQVPGAGSVFMSQTVKFKSPMYVGETVIGRVEVKTIRADKPVVVLSMVCRNPSGRVYMEGEATVMIPRHRWTPPAAPSTE* # PASA_UPDATE: g11955.t1, single gene model update, valid-1, status:[pasa:asmbl_4851,status:12], valid-1 NODE_26_length_60952_cov_42.1754 . gene 17248 18824 . - . ID=g11955;Name=g11955.t1 NODE_26_length_60952_cov_42.1754 . mRNA 17248 18824 . - . ID=g11955.t1;Parent=g11955;Name=g11955.t1 NODE_26_length_60952_cov_42.1754 . five_prime_UTR 18781 18824 . - . ID=g11955.t1.utr5p1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . exon 18644 18824 . - . ID=g11955.t1.exon1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . CDS 18644 18780 . - 0 ID=cds.g11955.t1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . exon 18319 18402 . - . ID=g11955.t1.exon2;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . CDS 18319 18402 . - 1 ID=cds.g11955.t1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . exon 18083 18185 . - . ID=g11955.t1.exon3;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . CDS 18083 18185 . - 1 ID=cds.g11955.t1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . exon 17248 17773 . - . ID=g11955.t1.exon4;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . CDS 17603 17773 . - 0 ID=cds.g11955.t1;Parent=g11955.t1 NODE_26_length_60952_cov_42.1754 . three_prime_UTR 17248 17602 . - . ID=g11955.t1.utr3p1;Parent=g11955.t1 #PROT g11955.t1 g11955 MARLGGGADVTPVVETTGELLETLRWLDIVVTDFMEESQPGLDKNLNDLVSKLQSLDNMKNKYKDVQIPLDVLSYIDDGLSPGLCTRDCLEETKARNEAVKGKIDSISRFRELLEMEVDRYFPEEVERFRELRAAPNQQTAMQTCAGADAPVNINVNNDGLAEK* # ORIGINAL: g1846.t1 original gene structure, not modified by PASA NODE_2979_length_4613_cov_39.5628 AUGUSTUS gene 166 4461 . - . ID=g1846;Name=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS mRNA 166 4461 . - . ID=g1846.t1;Parent=g1846;Name=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 4298 4461 . - . ID=g1846.t1.exon1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 4298 4461 . - 0 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 3864 4038 . - . ID=g1846.t1.exon2;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 3864 4038 . - 1 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 3195 3624 . - . ID=g1846.t1.exon3;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 3195 3624 . - 0 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 2702 2946 . - . ID=g1846.t1.exon4;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 2702 2946 . - 2 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 1447 2491 . - . ID=g1846.t1.exon5;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 1447 2491 . - 0 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 1135 1257 . - . ID=g1846.t1.exon6;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 1135 1257 . - 2 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 727 920 . - . ID=g1846.t1.exon7;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 727 920 . - 2 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 422 495 . - . ID=g1846.t1.exon8;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 422 495 . - 0 ID=cds.g1846.t1;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS exon 166 260 . - . ID=g1846.t1.exon9;Parent=g1846.t1 NODE_2979_length_4613_cov_39.5628 AUGUSTUS CDS 166 260 . - 1 ID=cds.g1846.t1;Parent=g1846.t1 #PROT g1846.t1 g1846 MDHVTPPSPSVDAVDCIRDGRLVRIPTALLASGDVVMLSSGEIAPARLHMIGPANVDEHMPERLHGLDLKRGDIFVQAALASASANSACNATATATAPASGSGTGGDGQLALEPVACSGVARFRFRVIDTPADAIIRGILFTDIRRPKPRAEKELDRVVWEVGMRYVLPLGVLLALVANAVRFGVIGGDVGGWMEMLLVLPMYAAIPLLPLTVPMLWLGLGVFCASRVLEMSDAAGRIVRSDSVVEVKDMDGEEGFDAIIPWRAVLRRMLRLMHCVDGTEGSLWRTSNPFFALSTVTIFCATDKEGVLSLPMPSVEKLLIFTREETGFASVQPEEMGQSAPNENGLLAPSIAVWPSSDDTERVTSVVLDVSLDASKPSGLKLHEVNWERFLPSLKPVGLNALVSTACRVPHTAAQMADRSRHIELRELGRLCAEDATQQHRHGDITGTGTAGVSALTLSSRHGVPEISHGSGDVNERHPSVHVTHTQHRADEQGILESAAHGTLVRPSVNSDGQTSDGASTGRRSSGSRIDVPTRSGNGGGAGLAVSFSADVLMRGLSRGSLHGPSADELRGELLPPAMMGRWTRVTPDARRWCLCMLGVEIGFGEGATQGFIPRAHIVSFAPSVSYAQHEHHSKSVSKNVRTDPHHLSVDAIPRPVSLAFDPVASTSDSVVPHMMSLVVATAEHEGMQLLTEGTPALVLSHCSEYWTGSDVQTLGAEQRKIILDFTATSLTKCMEVVAFAYKPVAPWLSVGSSQLTCHEGLEEGDGSHVPSKCESLCMELPPNDYSGYIDQSFPEAADLNESTASREVSTLDDFYKLQTGQMFIGTVAMQRQPRNDVVRFIDELNGA # PASA_UPDATE: g2766.t1, single gene model update, valid-1, status:[pasa:asmbl_7356,status:12],[pasa:asmbl_7357,status:12], valid-1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . gene 94 905 . - . ID=g2766;Name=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . mRNA 94 905 . - . ID=g2766.t1;Parent=g2766;Name=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . five_prime_UTR 650 905 . - . ID=g2766.t1.utr5p1;Parent=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . exon 522 905 . - . ID=g2766.t1.exon1;Parent=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . CDS 522 649 . - 0 ID=cds.g2766.t1;Parent=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . exon 94 422 . - . ID=g2766.t1.exon2;Parent=g2766.t1 NODE_4480_length_1560_cov_38.9118_potentialcontaminant . CDS 94 422 . - 1 ID=cds.g2766.t1;Parent=g2766.t1;3_prime_partial=true #PROT g2766.t1 g2766 MATPGTDAPPPAWSRSASLTSVLSSLLPSNVRKQQSLDGVAGVISEERADAYQNSPDGAIPRLLSVRADARLRRSPHLDALTLQFGGQSGHTAHGNIHALAVAQCSACTHPHSLVFAAAGRGVTCARPVLVGLSQEACAWESAMLALDMYIG # ORIGINAL: g8071.t1 original gene structure, not modified by PASA NODE_1833_length_8992_cov_35.6573 AUGUSTUS gene 248 2148 . - . ID=g8071;Name=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS mRNA 248 2148 . - . ID=g8071.t1;Parent=g8071;Name=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS exon 1825 2148 . - . ID=g8071.t1.exon1;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS CDS 1825 2148 . - 0 ID=cds.g8071.t1;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS exon 1120 1473 . - . ID=g8071.t1.exon2;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS CDS 1120 1473 . - 0 ID=cds.g8071.t1;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS exon 825 899 . - . ID=g8071.t1.exon3;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS CDS 825 899 . - 0 ID=cds.g8071.t1;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS exon 248 391 . - . ID=g8071.t1.exon4;Parent=g8071.t1 NODE_1833_length_8992_cov_35.6573 AUGUSTUS CDS 248 391 . - 0 ID=cds.g8071.t1;Parent=g8071.t1 #PROT g8071.t1 g8071 MASLTVRVCVSMQARCARQSTAIGRRSISFQSARRQQQGDAHPIPRSFKSERVSGFGGSVFSEFTALAQRYNAVNLGQGFPDFDPPAFVSDLAVDAVKSGFAQYTRAQGHPSLVNALGEHYTPLYNRKIEPMTDVVVTAGATEALMASMLAFINPGDEVVLFEPFYDSYPAQITMAGGIPKYVQMRPTGKKGTAEDWTIDASELRRAVTPKTKAIVINNPHNPLGKVFTATELSEIAAIAREKDLLVISDEVYEHLVFSDAPNEHVRIAMLPGMWDRTVTVGSAGKTFSVTGWKIGLY* # PASA_UPDATE: g8073.t1, single gene model update, valid-1, status:[pasa:asmbl_2760,status:12], valid-1 NODE_1833_length_8992_cov_35.6573 . gene 6620 8992 . - . ID=g8073;Name=g8073.t1 NODE_1833_length_8992_cov_35.6573 . mRNA 6620 8992 . - . ID=g8073.t1;Parent=g8073;Name=g8073.t1 NODE_1833_length_8992_cov_35.6573 . five_prime_UTR 8992 8992 . - . ID=g8073.t1.utr5p1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . exon 8905 8992 . - . ID=g8073.t1.exon1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . CDS 8905 8991 . - 0 ID=cds.g8073.t1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . exon 8183 8563 . - . ID=g8073.t1.exon2;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . CDS 8183 8563 . - 0 ID=cds.g8073.t1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . exon 7543 7788 . - . ID=g8073.t1.exon3;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . CDS 7543 7788 . - 0 ID=cds.g8073.t1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . exon 6620 7252 . - . ID=g8073.t1.exon4;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . CDS 6770 7252 . - 0 ID=cds.g8073.t1;Parent=g8073.t1 NODE_1833_length_8992_cov_35.6573 . three_prime_UTR 6620 6769 . - . ID=g8073.t1.utr3p1;Parent=g8073.t1 #PROT g8073.t1 g8073 MGCNGVDNGKLFFENVRVPREALLNAHSDVSEAGVFTSKVNSRRGRFLAVADQLLSGRICIASMCLGATKLALTIATRYAATRLAVGKGGISDTPILAYQLQQRALAPLLARTYALATALNYVKDKYANPSTLAAPVELVILCSAIKAMVSWNNEEVGTTCRERCGGQGYLSANRFGQIIGFAHAGMTAEGDNRVLMQKVTKELLSLLQSGKWQPVENTGEEFKGAKDFGNPAYQKYLLDQREGRLILKLGERMMQKMGSGKELFDVWMYEESDLVQDVARAYTERLAFDTITEAAQKQSTPNQAVLDKVRALYTLDTVSRDIGFFMGSGLVQPSEGDVLGDRIRQLCSSGEKGIGGDLLSLVSAFNIPEHSIAAPIASDWVEYNRGDNRGELEKFMY* # PASA_UPDATE: g8072.t1, single gene model update, valid-1, status:[pasa:asmbl_2759,status:12], valid-1 NODE_1833_length_8992_cov_35.6573 . gene 4871 6413 . + . ID=g8072;Name=g8072.t1 NODE_1833_length_8992_cov_35.6573 . mRNA 4871 6413 . + . ID=g8072.t1;Parent=g8072;Name=g8072.t1 NODE_1833_length_8992_cov_35.6573 . exon 4871 5050 . + . ID=g8072.t1.exon1;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . CDS 4871 5050 . + 0 ID=cds.g8072.t1;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . exon 5382 5501 . + . ID=g8072.t1.exon2;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . CDS 5382 5501 . + 0 ID=cds.g8072.t1;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . exon 5823 6413 . + . ID=g8072.t1.exon3;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . CDS 5823 6365 . + 0 ID=cds.g8072.t1;Parent=g8072.t1 NODE_1833_length_8992_cov_35.6573 . three_prime_UTR 6366 6413 . + . ID=g8072.t1.utr3p1;Parent=g8072.t1 #PROT g8072.t1 g8072 MEAVQSSSVGRALLREDRFSSSERVFFPNPAGLQISGLISVPHGCKPECRDIVIVCHGLLGYSESRLVTSVAGALSLPSLRIDFAGNGSSEGPLRYGNYEGETGDLRSAVLELRRRGYRVVCIIGHSKGGGIVLLYGAQYDDVPLIINISGRYHMAEMPRDRFTDAQWAEFDSKGSFLWRTHGPSQKPFYITREDVEGRAKVDMSTVASISNANVLVVHGTHDETVPCGDAREFAARMTNAELKIIEGASHMFPTAEEDSALRQAIVDWMDEKLPAVLSA* # ORIGINAL: g9007.t1 original gene structure, not modified by PASA # ORIGINAL: g9007.t2 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 AUGUSTUS gene 5094 11739 . + . ID=g9007;Name=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 5094 11739 . + . ID=g9007.t1;Parent=g9007;Name=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5094 5143 . + . ID=g9007.t1.exon1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5094 5143 . + 0 ID=cds.g9007.t1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5263 5291 . + . ID=g9007.t1.exon2;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5263 5291 . + 1 ID=cds.g9007.t1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5456 11032 . + . ID=g9007.t1.exon3;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5456 11032 . + 2 ID=cds.g9007.t1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 11157 11308 . + . ID=g9007.t1.exon4;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 11157 11308 . + 2 ID=cds.g9007.t1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 11506 11739 . + . ID=g9007.t1.exon5;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 11506 11739 . + 0 ID=cds.g9007.t1;Parent=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 5094 6621 . + . ID=g9007.t2;Parent=g9007;Name=g9007.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5094 5143 . + . ID=g9007.t2.exon1;Parent=g9007.t2 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5094 5143 . + 0 ID=cds.g9007.t2;Parent=g9007.t2 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5263 5291 . + . ID=g9007.t2.exon2;Parent=g9007.t2 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5263 5291 . + 1 ID=cds.g9007.t2;Parent=g9007.t2 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 5456 6621 . + . ID=g9007.t2.exon3;Parent=g9007.t2 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 5456 6621 . + 2 ID=cds.g9007.t2;Parent=g9007.t2 #PROT g9007.t1 g9007 MSASSSYGGGDPRKPPGAHPAQYGAGVPSAQWGQYATPGGYSQPQQPYTQAQPTPAQYAQYAQYTQAHPGAQGYAAQHPQPYQQQFQQQPQRHQQQHGQYPPTYGIPVGAYSQPPTVVGQSGLAYAPGSGYAPQGMHYGVGGYPGGSGVPGVTAHSEPPILTAEEARREQLRAAEVQRRMKEEAETAKKQMYFEANRQQLAGMSLKAERNPIASLFGNKDTASAVQIDIVGATSTRKLVKPAPADQQRQQAQQRQPTQQPQYHSELPMTVAANTLNAQSSTQLRSEVAPTDDDAEFGDFTGSDERDASALSPSHGLRQPSPRSASPALSRTAVPQPAKPSVDIDSLIKSSLSLDVSASPAKKFETPQQKLRTLGTMGASASSSPSVSPSTQRRAPQQQQQLQPQTQLSAGRAPGVDWSAKSEEMARLFGDAAPPSSMQQAPALLPLASQNIDFGLLDPSSRQPQQQGAGVTLLGGVAPLQSALSSVAYGQGAVSHSANTMGHAPLPLQSYGAQQQHQQQQQQQQQQQAQSSVQPYPSAYSAASWMQQQHTVQSHDTFGEFSGGHVVQQPQPAQQYAQPQAQSPPSLLPPTFLSPSPLHATPSYVLQQQPSSSGGAGRLLLPQSGTSTAPSAAGDDKYAVFRDASEPPAPLIAPQPQPQASSGGDKYAVFRMDSESDAPSVSASTAVNNGDRYSVFKTDTPEPQTQYGASSVPAFANNVPMNTNTQIQPLAMPSLSHGQPQSQLSGAVFPTAASSGTVPVIAPHSSASLVVNPPLFATMTTAHPLPSWQVAPATQQQQPSMDADMFSSFAQVAPQSQHYATALGAASGAPASTPSIAPSAFSAGFMSGEADFGEFGAVKEGATQQSVSASGGLGDEFSGDFGGDDGDFGDFASASADSFGGDAITTPLKHSSAPQTTSVGSVDVFGSIPSLATIAQQRQAMQQQQRLSGVSSNSSLVGTPTSSALQSPVPAQRQVSTNAILDGVCADAQHHVVQQSPHPDASKGRSASVSSAVSETPTRAAQQKDAVAVNSNGDSNNVAGSAGKRGRTPSFKLGSIFKSKNNNTPQSRGRSGSSSAEQSASPTAVPTAAPDAAQSAAQTPRRRSSARHPPASAKFLQLWPLLAEDAPELYPRMFKHLADASGRVPGKKAYAVFLATGVPRETLMRIWAIADTASVGSLDRFEMYIGLGLMGLFQEGRKPTVAVLKSLKEFPLPVFKGLELPAAVASDDEENGVGADGAVAGSAITPKEVPLTNNTQSAIAQQQHASGNDIGVDLFAAFSAVAAAPNATAQLAPLSMLAPAAFPPALQPSTTLQPAVTVPTLTAATITSRSASDADTELLIASPPPMIPPAATTVQLQQIPPQTQSFFGDSVDFSGSMLSPPPAQPSSTLSQQLEVSIVPTSTASASIPAMAAWTSFPEGKENASAVPGTGVDGGSTLAMGTVADADPFAALRGLSPDAGAAPATMLSPDGVVFGGGDANNNNNNNNNNNNNGDVVSSFPVAQQWSSAPVSLATDPYAAFASVASAVDARAESTSLAHDMPSGHVGMASTDDSDDWNGFASAEAAPQAPDAFNAVNATPNWFGYGSSAHVSAVQTSAQQQQQPSLAPNSIAAATFSSASVNSTKEISVHTDVVSIDAARIDPPKVMHTTTTTIPTTPAPKHPSLPPPSPPLHASVATQPTPSPLVLTPAVSSGNLFASEQSVSIGARGAPAAHVPNSADTPDPSHTTLAPQASRPTHSGVTTDDDDLFGDFSASAVTSTETAATNTAALSGISGDAAVSAAHFMDADPFADVHATPKHSVASIASAVSVTSNPFDHMDADGRGSRDSASAQRTSPAEIATAWGACLAKAAELLREAVGVAEGLALSARADHAASEALQSTEFSEYMRGVTEVYLVADRISTAASALSLKDKQRFDGVLSACRSAWVKLEQHASAARAEVPPSSALPPVARSMHDRYCGVCLVSLKWPQSDHLQPNHLRPNTASVSGGSCNGHYHAPCANLWAQKVCTPLPALTLP* #PROT g9007.t2 g9007 MSASSSYGGGDPRKPPGAHPAQYGAGVPSAQWGQYATPGGYSQPQQPYTQAQPTPAQYAQYAQYTQAHPGAQGYAAQHPQPYQQQFQQQPQRHQQQHGQYPPTYGIPVGAYSQPPTVVGQSGLAYAPGSGYAPQGMHYGVGGYPGGSGVPGVTAHSEPPILTAEEARREQLRAAEVQRRMKEEAETAKKQMYFEANRQQLAGMSLKAERNPIASLFGNKDTASAVQIDIVGATSTRKLVKPAPADQQRQQAQQRQPTQQPQYHSELPMTVAANTLNAQSSTQLRSEVAPTDDDAEFGDFTGSDERDASALSPSHGLRQPSPRSASPALSRTAVPQPAKPSVDIDSLIKSSLSLDVSASPAKKFETPQQKLRTLGTMGASASSSPSVSPSTQRRAPQQQQQLQPQTQLSAGRAPGV # ORIGINAL: g9016.t1 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 AUGUSTUS gene 42730 43279 . - . ID=g9016;Name=g9016.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 42730 43279 . - . ID=g9016.t1;Parent=g9016;Name=g9016.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 43180 43279 . - . ID=g9016.t1.exon1;Parent=g9016.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 43180 43279 . - 0 ID=cds.g9016.t1;Parent=g9016.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 42730 43028 . - . ID=g9016.t1.exon2;Parent=g9016.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 42730 43028 . - 2 ID=cds.g9016.t1;Parent=g9016.t1 #PROT g9016.t1 g9016 MTTYLGASSTMPFLELALAALHQVVGDTTGLISDDTLRGFAQELLDMLRGLVGPTSFFAHYQTVRERSLKSRAERKRRRVVAAIVDPALNAERRLKKNVLKKKSRKRKMDGFKARHSKKKGAAPEDDGDGGY* # PASA_UPDATE: g9013.t1, single gene model update, valid-1, status:[pasa:asmbl_9585,status:3], valid-1 NODE_82_length_43516_cov_48.4976 . gene 31965 34167 . + . ID=g9013;Name=g9013.t1 NODE_82_length_43516_cov_48.4976 . mRNA 31965 34167 . + . ID=g9013.t1;Parent=g9013;Name=g9013.t1 NODE_82_length_43516_cov_48.4976 . five_prime_UTR 31965 32007 . + . ID=g9013.t1.utr5p1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 31965 32174 . + . ID=g9013.t1.exon1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 32008 32174 . + 0 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 32344 32442 . + . ID=g9013.t1.exon2;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 32344 32442 . + 1 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 32577 32825 . + . ID=g9013.t1.exon3;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 32577 32825 . + 1 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 32995 33114 . + . ID=g9013.t1.exon4;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 32995 33114 . + 1 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 33477 33613 . + . ID=g9013.t1.exon5;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 33477 33613 . + 1 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . exon 33832 34167 . + . ID=g9013.t1.exon6;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . CDS 33832 34025 . + 2 ID=cds.g9013.t1;Parent=g9013.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 34026 34167 . + . ID=g9013.t1.utr3p1;Parent=g9013.t1 #PROT g9013.t1 g9013 MVCADCSADAAAQLPWADKMEAISGFLVDPIARFLHDMHPGMPLVPNRATSLSGSWFLSPRQHVIEFIVYNAFFLTIFFVLSKRLTAKGGAYYFIEVDARRKRTIVEHLATLSLLVTLGYTLYFKYLRGGTLFLLQPCHISLAILIVLSFAPAGWKGAHLLFNMYFYWMWGAILALAFPDLRDYEDPVEIFFFFFEHYLLVVIPFVFYAVGRFEILEPTLAITLCAFSVKAIYHSIVLESLALYTGLNLNYLMSPPTGILEHFGIYYRSVQYAFCCILTFVTRYVLVAIILSAVRFLFRRSSNPKSSASVSLRAAASKKAR* # ORIGINAL: g9014.t1 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 AUGUSTUS gene 35160 35747 . - . ID=g9014;Name=g9014.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 35160 35747 . - . ID=g9014.t1;Parent=g9014;Name=g9014.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 35160 35747 . - . ID=g9014.t1.exon1;Parent=g9014.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 35160 35747 . - 0 ID=cds.g9014.t1;Parent=g9014.t1 #PROT g9014.t1 g9014 MEDVAFREEVKTTNPMNRLVLKWSKRCEAHQDLAPFAGAHSVIIDAFVLPDLTSLHGVKHLVLGITKSEIDMASFSNLQRFSMRQGTVRNLAALSMVREIELNGTRVDSLKLPGAMRVTLVACQVINNNTVHDITDISGLQNARYVRLEGLSSLVDVSPLANAQEVIIGGCSLVSQSSLRALGRVKRLYLAGPVF* # PASA_UPDATE: g9015.t1, single gene model update, valid-1, status:[pasa:asmbl_9589,status:12], valid-1 NODE_82_length_43516_cov_48.4976 . gene 36784 42228 . + . ID=g9015;Name=g9015.t1 NODE_82_length_43516_cov_48.4976 . mRNA 36784 42228 . + . ID=g9015.t1;Parent=g9015;Name=g9015.t1 NODE_82_length_43516_cov_48.4976 . exon 36784 37419 . + . ID=g9015.t1.exon1;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . CDS 36784 37419 . + 0 ID=cds.g9015.t1;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . exon 37859 37976 . + . ID=g9015.t1.exon2;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . CDS 37859 37976 . + 0 ID=cds.g9015.t1;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . exon 38253 42228 . + . ID=g9015.t1.exon3;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . CDS 38253 42115 . + 2 ID=cds.g9015.t1;Parent=g9015.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 42116 42228 . + . ID=g9015.t1.utr3p1;Parent=g9015.t1 #PROT g9015.t1 g9015 MSAVNSLDLPGVDAPPMNSGSHILGDNIVRGDGLVDHPMKEDEQSRHPVGTHATADGGVICGDDYLSFDEMDGVEGYNGDSDGGGGSVDAEGSASAWSQDIGDESDDGLYHHGYGERLHAGGGVHHAQAAYQTERRESAGLQDDEGMGVGGVERDAFLTPADYSALQPLTVTCPMEELQIFRTLSTQPLVEMEYWFLVESTWLERWLKYAESNEYANAPGPIDNTPLLQSVDGSPPYELEETMEDGHDFTAVPESIWVNLVAWHSGGPPIQRPVLLTPSLKGRRVEPYPFGVSVWHTTADGFADDNVVHELFPPGCTRDQLRVRFIRRFCTDVYSEQRGTMDPIVASLYRVWVVFGTAHKPGFAELRGHDIPTPEEVRAWLYVVVEDAPDNVQSSNVQRVPAFVLEAADIDGGPELASHSERGAEWASHRAPSPRPLRRAVSSESSLDNVAGGNAYNSGSSSSSDRYRYSALHVKVIYPPPKTEWASIQTSQWDDTSSRNVTFVSPQLRDDTVQVGPFRLEHFADLPSNARSRRISFSSSSSASSSDSSLVGISRFTEDFRGISTTGPDTSYGARDSDPRFGPVWSMGNMACQNGVPGVCGLRNLGNTCFMNSALQCLSNTAVLSSYFLSGEYREHINRSNPLGMRGEVAQSYGALLNELWSGRYKCIAPSDFKRVIGSFAPQFCGFSQHDSQEFLGFLLDGLHEDLNRVTSKPSVEKVEGDGTNDEDTSAESWRRHLLRNQSVVVDSFQGLFKSTVVCADCGKVSITFDPFMYLSLPLPLSMERTLSVVVFLRDPTAAPVCARVSVKKDATVVGLCAAVASTLGNGLDADSLVVGDVLGNYVFRFLPRSHTVRSIADQDDIYVYETVPLAPPPAAAPVFGGQDEAGVTAEEKKKAAREPVACVICDASPAGGHLFAHQSCGVIFCDTCVYKYFRVKKIERIRRERLESAMLEAVHAGVPFDEESFVDDLDESTVSVDKDDSGPCPQCSADVTNETIRTISVDGDDEAVTSSTAAYNASSARMDESAPVEGRSFVSIVSRTCKDDNASSEHSSRYTWSLRDLLFGLPVVVSWQSATGVTWDELHALVDSALESRLSGYTYTPDDSAAGSIAECTPPSSLSNAPPGDTPTVGGDGGSHLDAHQVDAGVLDRQPSVASSSRKSERSATAESIPGSDEDSDVGYMSQGGDDALGCTHVSSVAAAGASCGSEPWRPVSAATAASVPRPYRLLLGNLNGTVCVQCNVRGCPGCALPRGTEQVCLRASEAIVAEWTDMSKCDRNRCDHVTLHPTAVAGQADGKDKDLTLEECIGAFTKEEMLEDGDLWYCPCCKEFRRASKKIGLWRLPNVMVVHLKRFMYTGSFRDKIDAPVRFPLSGLCMRDHVLSRDRCVDGASAEGGESDDAYTYDCYAIVNHFGGLGGGHYTAHARLAGIGEWVSYDDMSASVSAPDDSAFKEAYVLFYVRRGAFDGVDVSVGVPATGPVEEVCATTNRSDVIELRPREAVEADGEMLRDGSGVSCNEEVLALFSDTDPVDRLSSLPQK* # PASA_UPDATE: g9010.t1, single gene model update, valid-1, status:[pasa:asmbl_9583,status:3], valid-1 NODE_82_length_43516_cov_48.4976 . gene 18735 22654 . - . ID=g9010;Name=g9010.t1 NODE_82_length_43516_cov_48.4976 . mRNA 18735 22654 . - . ID=g9010.t1;Parent=g9010;Name=g9010.t1 NODE_82_length_43516_cov_48.4976 . five_prime_UTR 22500 22654 . - . ID=g9010.t1.utr5p1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 22439 22654 . - . ID=g9010.t1.exon1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 22439 22499 . - 0 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 22087 22244 . - . ID=g9010.t1.exon2;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 22087 22244 . - 2 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 21626 21748 . - . ID=g9010.t1.exon3;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 21626 21748 . - 0 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 21297 21382 . - . ID=g9010.t1.exon4;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 21297 21382 . - 0 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 20658 20819 . - . ID=g9010.t1.exon5;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 20658 20819 . - 1 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 20403 20460 . - . ID=g9010.t1.exon6;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 20403 20460 . - 1 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 20101 20178 . - . ID=g9010.t1.exon7;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 20101 20178 . - 0 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . exon 18735 19895 . - . ID=g9010.t1.exon8;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . CDS 19740 19895 . - 0 ID=cds.g9010.t1;Parent=g9010.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 18735 19739 . - . ID=g9010.t1.utr3p1;Parent=g9010.t1 #PROT g9010.t1 g9010 MSEPSFTMGLSTEAKMSLPLEEIIKQRKKLKGGKGGQKGGNAAADGDKMEIDQDGSKAKKRRVRKKKTDTVVAGKQATKLGQSKERVSQALRGVTKAQQKAAREQKVAANRGIKTDANPKAIRPKLGPAKKVVVSARGNAVSAAPEGGNRRRRNRRKSGSSDTGAPAVNNNSSNNSNNNSIPNIKISFTNDASTPALKKRVKKPQPVQPTRAETVKAKDRQRSAQASSNSRQVAINKKRGIEVGGRRERGGKAAGASPRANGGSRPKVAAAGGVKRTVVIGSPRGGRRGGKRN* # ORIGINAL: g9011.t1 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 AUGUSTUS gene 23084 27750 . + . ID=g9011;Name=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 23084 27750 . + . ID=g9011.t1;Parent=g9011;Name=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 23084 23201 . + . ID=g9011.t1.exon1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 23084 23201 . + 0 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 23380 24434 . + . ID=g9011.t1.exon2;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 23380 24434 . + 2 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 24619 24750 . + . ID=g9011.t1.exon3;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 24619 24750 . + 0 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 25321 25399 . + . ID=g9011.t1.exon4;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 25321 25399 . + 0 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 25665 25712 . + . ID=g9011.t1.exon5;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 25665 25712 . + 2 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 26073 26194 . + . ID=g9011.t1.exon6;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 26073 26194 . + 2 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 26447 26491 . + . ID=g9011.t1.exon7;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 26447 26491 . + 0 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 26662 26725 . + . ID=g9011.t1.exon8;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 26662 26725 . + 0 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 27011 27172 . + . ID=g9011.t1.exon9;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 27011 27172 . + 2 ID=cds.g9011.t1;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 27488 27750 . + . ID=g9011.t1.exon10;Parent=g9011.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 27488 27750 . + 2 ID=cds.g9011.t1;Parent=g9011.t1 #PROT g9011.t1 g9011 MADAFVGCIVSVSLASSKLRVKGTVIRVDPNDQSITLKNVSRSDTNLIIPEMVLIGKDIGDLQLMSQPIVSSSNGPAPAAPQTSAPQSHVRNLFPGDTQHRPPVQQPQQYPQNGPLPYPHQYPSHPLPPQHAPMPYHPHMAGQPVPLSPGFPPAGPHGYGLPPQLQAMAQGMPPHQQHMHPQFQQFHEQQQHQHQPQHQQHPHQHQQHSHQPQHAMPPMPTISSRLPIDPAIVSMSPAKGSHSSFGQSVGNGPAGVNSSAQNQQQQQQQQQQPRQTKKRGGKQVDSEGESGVDAPRTPVLAATAAPQGSLPGTPTYKRREKGGRAHAADMYASSDGGDEGQGHRNQPAGGRAQKDRACFGVDVGGGSIEEEFDFEKNLALFDKATVFAEIMEHDTVHPEQRLVAINKRPQNFRHDEMILEPASNPMNEFVKAVEQIRFTTDNGVIVPAIDPNQKEAILRHAQDVGMSASLLVENAGRRGSRRINPRNLHQTPLVVVLVADGFAGATAVCAARHMTNHHVKVIVCVVSTGKSSELLASQLALFESLGQRVLNRIDELPANGATPVDLIVDGLCSDCIKFPCWADAVAWANGNKAQTLAIDFPSGFDPKSGRMLDPKRSVSAKWTLALGLPLRGLEQPTIGGQLFLADIGLPMNIFAKAGIRYYSPFSDKYVISIEASVIPSESQPPIVAEMSSPEL* # PASA_UPDATE: g9012.t1, single gene model update, valid-1, status:[pasa:asmbl_9584,status:3], valid-1 NODE_82_length_43516_cov_48.4976 . gene 28942 31003 . - . ID=g9012;Name=g9012.t1 NODE_82_length_43516_cov_48.4976 . mRNA 28942 31003 . - . ID=g9012.t1;Parent=g9012;Name=g9012.t1 NODE_82_length_43516_cov_48.4976 . five_prime_UTR 30835 31003 . - . ID=g9012.t1.utr5p1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . exon 30793 31003 . - . ID=g9012.t1.exon1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . CDS 30793 30834 . - 0 ID=cds.g9012.t1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . exon 30310 30435 . - . ID=g9012.t1.exon2;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . CDS 30310 30435 . - 0 ID=cds.g9012.t1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . exon 30022 30095 . - . ID=g9012.t1.exon3;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . CDS 30022 30095 . - 0 ID=cds.g9012.t1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . exon 29509 29613 . - . ID=g9012.t1.exon4;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . CDS 29509 29613 . - 1 ID=cds.g9012.t1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . exon 28942 29234 . - . ID=g9012.t1.exon5;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . CDS 29045 29234 . - 1 ID=cds.g9012.t1;Parent=g9012.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 28942 29044 . - . ID=g9012.t1.utr3p1;Parent=g9012.t1 #PROT g9012.t1 g9012 MSRRRARSNSFRGKEMHDNMHGSCDVVDELLGSGDEGESGESSKPPVGNQRGHLRKASGIPAGFKETVTIKQVIKRRSGDMSGAYDTKLSPDDIEEFRELVSKYMNRTIEEIMRFREDENCATDRKQLEDLAIKLYLYFESKERNSLKLSLSEFGLKCTVDDVLHKLIRTGDEPKLHG* # ORIGINAL: g9009.t1 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 . gene 18013 19664 . + . ID=g9009;Name=g9009.t1 NODE_82_length_43516_cov_48.4976 . mRNA 18013 19664 . + . ID=g9009.t1;Parent=g9009;Name=g9009.t1 NODE_82_length_43516_cov_48.4976 . exon 18013 19664 . + . ID=g9009.t1.exon1;Parent=g9009.t1 NODE_82_length_43516_cov_48.4976 . CDS 18013 19356 . + 0 ID=cds.g9009.t1;Parent=g9009.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 19357 19664 . + . ID=g9009.t1.utr3p1;Parent=g9009.t1 #PROT g9009.t1 g9009 MCAVDAIVGAGGTTCGPATTTVKVSMAGRIPPRTILSSGAVIDLTDVTTIDGISALFRRTKEALNRLDSNARIVFLTRDPTEASLHTGESAAVAAACAGFVRSLSKELGMSGTTANLLCVADGAVRDIPEPLVHLLSNKSAFITGQVISLTGDLGAALTTSAPSAAGHTGVSSQSMTIDSTISTADAQAAHLPDRLYLWRERLTGRQIVVTGAARGIGASTATRLAEEGAKLLLVDHPSQEEALADMTRRLFGRASYACADLGAEDASASVAASVAGWCVGGLDGFVHNAGITRDRMFSRMEESAFQRVIDVNLGAIIKIDRALFAGGHVRDNARMVLVSSISGIAGAAGQTNYSASKSGVIGYCRQMAKEWASRGLAYNAVAPGFIETPMTAAMPAVAREVARRSNSMSQGGVPLDIAETIVLLSSPRTRLTGQVVRVCGGHLIGQ* # ORIGINAL: g9008.t1 original gene structure, not modified by PASA NODE_82_length_43516_cov_48.4976 AUGUSTUS gene 12372 16886 . - . ID=g9008;Name=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS mRNA 12372 16886 . - . ID=g9008.t1;Parent=g9008;Name=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 14655 16886 . - . ID=g9008.t1.exon1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 14655 16886 . - 0 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 14173 14481 . - . ID=g9008.t1.exon2;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 14173 14481 . - 0 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 13826 14025 . - . ID=g9008.t1.exon3;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 13826 14025 . - 0 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 13381 13499 . - . ID=g9008.t1.exon4;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 13381 13499 . - 1 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 13087 13178 . - . ID=g9008.t1.exon5;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 13087 13178 . - 2 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 12787 12876 . - . ID=g9008.t1.exon6;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 12787 12876 . - 0 ID=cds.g9008.t1;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS exon 12372 12545 . - . ID=g9008.t1.exon7;Parent=g9008.t1 NODE_82_length_43516_cov_48.4976 AUGUSTUS CDS 12372 12545 . - 0 ID=cds.g9008.t1;Parent=g9008.t1 #PROT g9008.t1 g9008 MPPKRPNPSGSIVAPVLMPCGEPMSWAEVVHHTLFSLVHGERTLYAKRAAAAAAARDAPTAVVDGASNTAVATDNTTGNGAVVASDGGSAGVANSTPSTPGNSAATGAAVVAGAIDAPVEIDYSQRRFFRWREDICKFIDERWDSLLPGRTRTATWKNTVASVLSVNPDRFLAGTPVKKEPGWWALMCEDQLPEDYIANPLGVSSTRRGFLHVKGVVSGSSTPNTSLSPMTPKTPNALMTPTFFRGTPLPISQPALESIGTSSPSQSGPLGTQTAPSIPTDGIRRTAIANSSEAPAFAVGAARATPIVVKTEPLDGSGVAASAENTATSAVHTLDVGAVALQQHAMQGDKNRSYEGRAKLETDDVDGSARSMALATKAISMQTPHANSDHMDAEEFGESTDALIDRLMREEPRFSSTSLAHQPSQPPPLSTTQSSAARALPRARGDSRSSIEGKYAGSGSLVASGGGSGSGARVRAWTREVSDVPLSASAVPSNVGPDGLQIGVAVAIECEVPMVVDGAVAGHDAPVATDDAVGSVIAATTAADVDAVMHAQFMGDPSDNSTAVAVATAADAGRNKRKRSLSVSGKMGSFDDGNDLPAEGTWHNKRPKNEKAAAMRADVTDDKGKVIASARRKSKSRVKDGIEDVSVKEGPESAANGVSAGIPSSHNTAEAGRAGAAAVSVSAISQVPAVEEDAVEIVGTAPVPIPVIRRADEKMLMLRLEALHADVKGTDASRRLLRKLKLRELKRRKGMKVFDLDHRVRDALSGCQWYKGSGAVLTPDEFEVRRLKLIKRRGHVATIQGRDSVPIVPSSGVPLQGQSLFPPSATSFASVGARDGDARVLDRYQQQVGLALRLPPPASIPFSARLDGAADRIEMTPIVSAYTGRTLKPFIRRDYESRTLRMKVHDELLARCHRHDPDWKPPQIEPIDYCYIRPHLIPAVNNLCSQFLWPGIDLSECLQYPDFSVVVRYRRLVIGCAFLTPDVKVNEAYLSYVVVHPDWARAGIASFMLYHLIQTCMGKDITLHVSATNPAMILYQKFGFKPEEFIVDFYDKYLPEGSEMCTHAFHLRLRR* # PASA_UPDATE: g9006.t1, single gene model update, valid-1, status:[pasa:asmbl_9582,status:3], valid-1 NODE_82_length_43516_cov_48.4976 . gene 22 3855 . - . ID=g9006;Name=g9006.t1 NODE_82_length_43516_cov_48.4976 . mRNA 22 3855 . - . ID=g9006.t1;Parent=g9006;Name=g9006.t1 NODE_82_length_43516_cov_48.4976 . five_prime_UTR 3645 3855 . - . ID=g9006.t1.utr5p1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 3574 3855 . - . ID=g9006.t1.exon1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 3574 3644 . - 0 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 3277 3452 . - . ID=g9006.t1.exon2;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 3277 3452 . - 1 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 2848 2948 . - . ID=g9006.t1.exon3;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 2848 2948 . - 2 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 2373 2453 . - . ID=g9006.t1.exon4;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 2373 2453 . - 0 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 1786 1963 . - . ID=g9006.t1.exon5;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 1786 1963 . - 0 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 1479 1623 . - . ID=g9006.t1.exon6;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 1479 1623 . - 2 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 1114 1287 . - . ID=g9006.t1.exon7;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 1114 1287 . - 1 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 738 968 . - . ID=g9006.t1.exon8;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 738 968 . - 1 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . exon 22 588 . - . ID=g9006.t1.exon9;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . CDS 537 588 . - 1 ID=cds.g9006.t1;Parent=g9006.t1 NODE_82_length_43516_cov_48.4976 . three_prime_UTR 22 536 . - . ID=g9006.t1.utr3p1;Parent=g9006.t1 #PROT g9006.t1 g9006 MLAAAHRGMRLLARADVQRASLFGISRTVVATSYTTRSARPPTFADASTLPKRNVTYVHQEKYQSIEFQQLMRQYDLTKEYIFSNDVPGPQVNSRDIFITNELSLTDVNVYGFDYDYTLANYTHELQYLIYDIAIRSLVEAKKYPRAILDIPYDCNFAIRGLHYDIRKGFLMKVDAFQTIQLGTVYRGHHPVSNEDTLRLYNGAHIPMDYMNKHMVQLTDLFSLPEACLLANLTQFFIDKQMRVDPEYLYWDVKSAIQELHASRTMHNAVMRDIERYLRKKSSIGRLLSVLRVAGKKVFLLSNSSFDFIDKGMTYMVGSGWRDLFDVILLDAHKPRFYNSERPFDDSTRVVTQRHGIWSRDLSREAYIWRGTSPISHASLDGKEHRRCTAGTTCTLTSSIHR* # ORIGINAL: g8553.t1 original gene structure, not modified by PASA NODE_2312_length_6762_cov_37.0019 AUGUSTUS gene 4150 6293 . + . ID=g8553;Name=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS mRNA 4150 6293 . + . ID=g8553.t1;Parent=g8553;Name=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS exon 4150 4179 . + . ID=g8553.t1.exon1;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS CDS 4150 4179 . + 0 ID=cds.g8553.t1;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS exon 4415 4492 . + . ID=g8553.t1.exon2;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS CDS 4415 4492 . + 0 ID=cds.g8553.t1;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS exon 5035 5179 . + . ID=g8553.t1.exon3;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS CDS 5035 5179 . + 0 ID=cds.g8553.t1;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS exon 5564 5754 . + . ID=g8553.t1.exon4;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS CDS 5564 5754 . + 2 ID=cds.g8553.t1;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS exon 6054 6293 . + . ID=g8553.t1.exon5;Parent=g8553.t1 NODE_2312_length_6762_cov_37.0019 AUGUSTUS CDS 6054 6293 . + 0 ID=cds.g8553.t1;Parent=g8553.t1 #PROT g8553.t1 g8553 MPPKAKEAKAKAKAVEDKTFGMKNKKGKKGQDFVKQVESQAAQKAAAARAAAGQAVVSKKDEKKKEAEELNLLFKPVTEQKVPQGADPKSVLCAFFKQGQCKKGPKCKFSHDLNIERKGEKRSLYHDGRDEDLEKDTMDNWDQNKLEEVVTKKHGVVEAAKPKTDIVCKYFLEAIEKSLYGWFWVCPNGAEKCMYRHALPPGFVLKKDKKAMEDAAEEISLEELIETQ # PASA_UPDATE: g8552.t1, single gene model update, valid-1, status:[pasa:asmbl_4022,status:12], valid-1 NODE_2312_length_6762_cov_37.0019 . gene 1045 3183 . - . ID=g8552;Name=g8552.t1 NODE_2312_length_6762_cov_37.0019 . mRNA 1045 3183 . - . ID=g8552.t1;Parent=g8552;Name=g8552.t1 NODE_2312_length_6762_cov_37.0019 . five_prime_UTR 3059 3183 . - . ID=g8552.t1.utr5p1;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . exon 3043 3183 . - . ID=g8552.t1.exon1;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . CDS 3043 3058 . - 0 ID=cds.g8552.t1;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . exon 2613 2809 . - . ID=g8552.t1.exon2;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . CDS 2613 2809 . - 2 ID=cds.g8552.t1;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . exon 1045 2310 . - . ID=g8552.t1.exon3;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . CDS 1369 2310 . - 0 ID=cds.g8552.t1;Parent=g8552.t1 NODE_2312_length_6762_cov_37.0019 . three_prime_UTR 1045 1368 . - . ID=g8552.t1.utr3p1;Parent=g8552.t1 #PROT g8552.t1 g8552 MAFFGGRVSASLAIAIILVAIFSVAEAQIRSCPSSRTCAFTRRSDCLGNNRCGECHPKYVFSEGRCRFTGVVPKKATFEDRDLILIAIGNFSATDPRDVADILRGASGVVGETDTAAISWSIPKVVVQIFFDHADSKATSVTALKAIVAADGFLGKGITDVAVRTSNGDVSIDALVTPTKTNTGDSASGSSGGKSGSDKKYIIAGSSIVGVVVVAGVAGLLVYKKRRDNEEETIMSGYQFVRSHDSLIKRKSTDELDCATYSREDLNPLRAMLAESTDQLLPHQMAAQQSAAETERTKSTVTYVFKEKKGSILAGVNFKKRANSDASESVGAADDIGDASSISMPAGVNPMVHRAILSTGTVQYSQRSTDGRSSLENAGMSDDE* # PASA_UPDATE: g912.t1, single gene model update, valid-1, status:[pasa:asmbl_7130,status:3], valid-1 NODE_423_length_24015_cov_42.6669 . gene 16653 19784 . - . ID=g912;Name=g912.t1 NODE_423_length_24015_cov_42.6669 . mRNA 16653 19784 . - . ID=g912.t1;Parent=g912;Name=g912.t1 NODE_423_length_24015_cov_42.6669 . five_prime_UTR 19753 19784 . - . ID=g912.t1.utr5p1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . five_prime_UTR 19632 19643 . - . ID=g912.t1.utr5p2;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 19753 19784 . - . ID=g912.t1.exon1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 19574 19643 . - . ID=g912.t1.exon2;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . CDS 19574 19631 . - 0 ID=cds.g912.t1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 19100 19462 . - . ID=g912.t1.exon3;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . CDS 19100 19462 . - 2 ID=cds.g912.t1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 18695 18930 . - . ID=g912.t1.exon4;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . CDS 18695 18930 . - 2 ID=cds.g912.t1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 18313 18465 . - . ID=g912.t1.exon5;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . CDS 18313 18465 . - 0 ID=cds.g912.t1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . exon 16653 18132 . - . ID=g912.t1.exon6;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . CDS 17053 18132 . - 0 ID=cds.g912.t1;Parent=g912.t1 NODE_423_length_24015_cov_42.6669 . three_prime_UTR 16653 17052 . - . ID=g912.t1.utr3p1;Parent=g912.t1 #PROT g912.t1 g912 MAPMGMMRLAVGQQRLAFGSVLLGRRMATVASVQNAKLRSWIEDKVKLLQPTNVHVCDGSDAENKTIIDTLIRSGTIEALNPSKRPGSYLVRTDPGDVARVEQQTYICAKTKEDAGPTNNWIEPTEMRGRISKLFTGAMKGRTMYVIPYSMGPLSSPISRIGIEITDSPYVVASMRIMTRIGADVIKALGNNDFVPCVHSIGKPLKEGEKDVPWPCNTKDRAIVHFPETREIWSFGSGYGGNSLLGKKCFALRIASVLGRDEGWLAEHMLILGITNPQGLKKYIAAAFPSACGKTNLAMLQPTLPGWKVECVGDDIAWMKFGSDGRLHAINPENGFFGVAPGTSYQTNPNAMRSIETNTVFTNVARTEDGDVWWEGMTKEPPKGKITSWLGEPWTAGDKTKPAAHPNSRFTVSSRQCPIIDPNWETPEGVPISAIVFGGRRPNLVPLVYESFNWQHGTYIGSAVSSETTAAAESAVGTLRHDPFAMLPFCGYNMGDYFGHWLKVGKAAKDPSKLPRIFHVNWFRQSKEGKFLWPGFGENSRVLKWIFERTEGKDVAVKTPIGFVPKKGAIDTAGLDVSPAVMDELLHIDMPRWVDEVGKIRKYHAQFGDRLPQGIREELDGLEGRLKRA* # PASA_UPDATE: g910.t1, single gene model update, valid-1, status:[pasa:asmbl_7129,status:12], valid-1 NODE_423_length_24015_cov_42.6669 . gene 12040 13511 . - . ID=g910;Name=g910.t1 NODE_423_length_24015_cov_42.6669 . mRNA 12040 13511 . - . ID=g910.t1;Parent=g910;Name=g910.t1 NODE_423_length_24015_cov_42.6669 . five_prime_UTR 13456 13511 . - . ID=g910.t1.utr5p1;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . exon 13453 13511 . - . ID=g910.t1.exon1;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . CDS 13453 13455 . - 0 ID=cds.g910.t1;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . exon 12876 13012 . - . ID=g910.t1.exon2;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . CDS 12876 13012 . - 0 ID=cds.g910.t1;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . exon 12040 12413 . - . ID=g910.t1.exon3;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . CDS 12182 12413 . - 1 ID=cds.g910.t1;Parent=g910.t1 NODE_423_length_24015_cov_42.6669 . three_prime_UTR 12040 12181 . - . ID=g910.t1.utr3p1;Parent=g910.t1 #PROT g910.t1 g910 MTKIKAHELRGKAKTDLLRQLDELKTELSQLRVAQVTGGPVSKLSKIKTVRKGIARVLTVINQTQREQLTKFYQSKKYAPKDLREKKTRAIRRALTKHEATLTTLRQKKREIHFPKRVFAVRA* # PASA_UPDATE: g908.t1, single gene model update, valid-1, status:[pasa:asmbl_7128,status:12], valid-1 NODE_423_length_24015_cov_42.6669 . gene 215 7292 . - . ID=g908;Name=g908.t1 NODE_423_length_24015_cov_42.6669 . mRNA 215 7292 . - . ID=g908.t1;Parent=g908;Name=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 7248 7292 . - . ID=g908.t1.exon1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 7248 7292 . - 0 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 7010 7083 . - . ID=g908.t1.exon2;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 7010 7083 . - 0 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 6577 6740 . - . ID=g908.t1.exon3;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 6577 6740 . - 1 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 6276 6359 . - . ID=g908.t1.exon4;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 6276 6359 . - 2 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 6020 6122 . - . ID=g908.t1.exon5;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 6020 6122 . - 2 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 5719 5794 . - . ID=g908.t1.exon6;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 5719 5794 . - 1 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 2516 5509 . - . ID=g908.t1.exon7;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 2516 5509 . - 0 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 2158 2285 . - . ID=g908.t1.exon8;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 2158 2285 . - 0 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 672 1886 . - . ID=g908.t1.exon9;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 672 1886 . - 1 ID=cds.g908.t1;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . exon 215 539 . - . ID=g908.t1.exon10;Parent=g908.t1 NODE_423_length_24015_cov_42.6669 . CDS 215 539 . - 1 ID=cds.g908.t1;Parent=g908.t1 #PROT g908.t1 g908 MAAKGESMKDVRQEKLFIRWVNYQLRKRSIAIQNLTTDFCNGSVLCNLLECIFSTKVNFHVKPEKRWHCIDNIHIAFYTIDKHIGRRNFSWSAEDVEKGNKKIITNILATLIRKTHFVLSADGDLSVTRVKQVLMAWCRDIVAGVDGVNGVSNFDTSFQSGLAFCAIIAHYKPNLIDYDAQKRKDPTSCLSAAFDAAETLEVPRLLDPEDFAPEGSSSTPAVDELAVMVYLAILLRTLDGDRVPKQSSTPSAAPGAVTKRVQSSPQIALPERERSHSVVIPPSPSALQKTEPVATAPAPAHSDTAQQPTEKRLSLSTPSSPRTSPAAVIAAADRRSSATMSPGRARARTEAPMPGSPDQRRRDLEELAAILRAKEAERDAALRMVDELNRQLALEKEHAHEALAAIQESTRRGSESDAETDNARLNKALSRVLRLESERDGAQRIVDDLSRTLRPDNDVSATRLRRPSGPAAFGPDRKSSLGVVPERKSSLPASLGSLPGRDGYGADGEVEMDEGKLEACKEFYEKELETLRKAFINEAAERSRKEDQLAAESKRKDQMIASLEMELAMAKAEIRRSSVSVHGPVDIGIPQTLLSPRSLKGADSGAVTASGDDGTAPPNLSDNAPAVTITHVQKDDPEPSDERVASDDVVLNSAARAALLENAAVDVVPASEPISAAADVISALPVASESPSPRRASLAPEDAKSRKGSIAVEIESALALEAKQRRSSMPVRSRSPSPSGLSRTASVSTGEMLQRSSPRVSSRPASMIMDPGDSNDDSADEILKPLTFANVRAGEIGYFPSDDELMSDNDALDESPPRSPTPQSARRSPSPLPLQARASSPVVFVGAPAGGLAQSPQSSTSSITNSNSSTTSNNNNNNGNDGTRSGRASLDAGSNSAPVDRKASVDDFVRIFEVAPDQPYTIVRAHRGALVPEVIRQSLVRAGLRSRDPADYCLVEIVGNKERILDDTESPQAVHSVLGEAGMIALRLKSAWQKGGASEFVRRKPLQRTATEPAVSVDGLSPAKAGSPRARRRSTAAKSTTVRVHQRNRNYISITVTAMSTAGDLLALVLAKFLVPQDLLGHYCLFVSTAASGERLLHDDENIARLVRGSEKEGRTVDFFLKERPYGAGMVSARMRSTSCHDRADTGSVAARGFLPTRHIIKPADTFVIEDGACSFDDTQHKVVVENLEQETTWYRTHFIGREHTNSFGTDETLGSFVLSVIREDNKPSQFGDPMSLYRVLLWRQTGVDRLAVPCKEKQQISTAQLLRYICPQLANAKLRPLSDYDSQKELIQIEDYVTNRTFKFGILYAKPGQSREEEMFCNENGSPEFDEFLRAMGERITLKGWPHFRAGLDVKGGTTGTESVYVTYKGYEVMYHVSTLLPHIPGDAQQLERKRHIGNDIAVIVFMDEDDPESVGDGEGGESKFFPGAIASHFIHVIAVVKPSTDENGNRNYWVNVASKDNIPRYGPFLPNPPCFVPGAKFREFMLAKLINGERATYASHQFRERERRTLSQLLAALEDKTVKKKQVSDKAFVPAPRLSIPLISSNSFSGDEGGVIAEARRLLLDPKEMQGSNELFMAEPVIAGLPFEITCGDRVKDRLLLGTASGMFLYGGTASIQKVNLAQERKFSQLTVVSELGITIGCASRGGVSHIVVFQTETLRAGSVSATETEIEETKGCNLFALDPYWRSSIASDSLFLCVAVKKALLLFVWNPDKAAFCKLKAREDGTASCVIT* # PASA_UPDATE: g909.t1, single gene model update, valid-1, status:[pasa:asmbl_7133,status:12], valid-1 NODE_423_length_24015_cov_42.6669 . gene 8027 11720 . + . ID=g909;Name=g909.t1 NODE_423_length_24015_cov_42.6669 . mRNA 8027 11720 . + . ID=g909.t1;Parent=g909;Name=g909.t1 NODE_423_length_24015_cov_42.6669 . exon 8027 10548 . + . ID=g909.t1.exon1;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . CDS 8027 10548 . + 0 ID=cds.g909.t1;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . exon 10733 11381 . + . ID=g909.t1.exon2;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . CDS 10733 11381 . + 1 ID=cds.g909.t1;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . exon 11565 11720 . + . ID=g909.t1.exon3;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . CDS 11565 11696 . + 0 ID=cds.g909.t1;Parent=g909.t1 NODE_423_length_24015_cov_42.6669 . three_prime_UTR 11697 11720 . + . ID=g909.t1.utr3p1;Parent=g909.t1 #PROT g909.t1 g909 MLRSHRAGAAGVGRDTPRRLRRLVWLIILASVLAAAASLAMLLSDSAANVELGDVKLMSVPALSNRERVSENIAHVAPAKKAPLRVSAPAVSFVVTWSSDSNPIDSLLRSIQRQGFPSVEIIIVDASGGGVDSSAPFRRAFNRVRSPPSTDGDDNGCALWVNGTHPHSGYKGTNCTVFIPRGNAACCDVHGPACAYDCGIRFARGLWVALVDADTYLDDNFYTHIKLELGRRLLSLSDAYIHQYYSAIVATELAVGRKVPQQSTRDYLPPASTQLMPPHTDSPTCVLFRRDVLRGALLGTVPPLPPHPFPFTGGLAFHPLVWGGKWSMWDLWMRIADAAPFTKLIRVPPAVLWRKPIPRSIPEVLPCLDTPAVCSRVFRIAAAGRFAGGYALDALESLEKDWGVVREITASTAWARLTNSIHSTRTRHDNESVSSFVWPPSVRAYVRVLEAVDNRVRGNRTVALNMLKSVAGDIHRDAGGDAGALSDAARCSVKIQEHADAIPANSPQRARLGWVRRLHPFRSLLEVPPASAPAEACRCALVHELLAALSARCLRARDESGGRSRRNDDPAEVEPPIAPAARQPEGPGLAQESNVTNSAPPIRVSMNSTDVKGGAVHEDNSTVNATLPSDSARATNGSNSTDPVRMASQTSLPPLRAAQEDAPVGCGLIHMFAGPDYRLRRRRLAAARAVASALKHNPNATIVVHYDSAPERDLGGSAKPWFSDGLGATLLETLGGLLEVEAAGQRDEWVPRLIFVPVCLEWHASRAGVEDLAELVKETSLESDTEVRLVQMDMDAEESANKAEGGEGGDGVSQVKFSDKLLRRRDALLRKGLSDKMLAYRQLILRAYGGTASDADFVFVQSLHPFVSNHHVIAWYPTPLELPHHQTTWDESADIGAVVQTRMPNAPLFEAILAVLNLRARRSRESRRAHIDGTDGTSIPFLDDDELAVIIESESAPRGSAAWLATRIRGSLEAVYRGLQGTAQRPLGAKGHTGASEAIQLFHVAHLPCPACVFTGTAEDREVSSVPPRMAVYATKSYGCPLSRAWNIIAGEAYDLPADSDRMRAVLAYPQHMDGLALSIAEQSCPSEALCLPLTTGYES* # PASA_UPDATE: g911.t1, single gene model update, valid-1, status:[pasa:asmbl_7134,status:3], valid-1 NODE_423_length_24015_cov_42.6669 . gene 13969 16556 . + . ID=g911;Name=g911.t1 NODE_423_length_24015_cov_42.6669 . mRNA 13969 16556 . + . ID=g911.t1;Parent=g911;Name=g911.t1 NODE_423_length_24015_cov_42.6669 . five_prime_UTR 13969 14159 . + . ID=g911.t1.utr5p1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . exon 13969 14372 . + . ID=g911.t1.exon1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . CDS 14160 14372 . + 0 ID=cds.g911.t1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . exon 14586 14952 . + . ID=g911.t1.exon2;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . CDS 14586 14952 . + 0 ID=cds.g911.t1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . exon 15180 15292 . + . ID=g911.t1.exon3;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . CDS 15180 15292 . + 2 ID=cds.g911.t1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . exon 15541 15660 . + . ID=g911.t1.exon4;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . CDS 15541 15660 . + 0 ID=cds.g911.t1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . exon 15857 16556 . + . ID=g911.t1.exon5;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . CDS 15857 16039 . + 0 ID=cds.g911.t1;Parent=g911.t1 NODE_423_length_24015_cov_42.6669 . three_prime_UTR 16040 16556 . + . ID=g911.t1.utr3p1;Parent=g911.t1 #PROT g911.t1 g911 MASTSGQPRSRTLTAQKGPGMITRSLTSKFMQYRSTASHRRDASHSWGGPRNDDSSETDDNSKLLIGRSDEGSSKDTALNVAPAWVDIVEQVHYNFNGIRQRMKDLWPLHDKHINQPGLDDDVEREQEIEIMTKDITSKIQASKKDITSIGDMAKKSGKPAEFKMCKNVMSALAAELQELSQEFRKGQHHYLNRMRGREEKSRGIFVEEEDASYDKADEYYDPGWDQTQQQELERNTREIEERELEITRIVRSIHELHEIFKEVAALIIDQGTILDNIEHNIDVTETLVEEGHGELVAADKYQRRSRKCLFILLLVVAIIVVVIILIVRKS* # PASA_UPDATE: g913.t1, single gene model update, valid-1, status:[pasa:asmbl_7135,status:12], valid-1 NODE_423_length_24015_cov_42.6669 . gene 20513 23957 . + . ID=g913;Name=g913.t1 NODE_423_length_24015_cov_42.6669 . mRNA 20513 23957 . + . ID=g913.t1;Parent=g913;Name=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 20513 20538 . + . ID=g913.t1.exon1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 20513 20538 . + 0 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 20686 20777 . + . ID=g913.t1.exon2;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 20686 20777 . + 1 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 20963 21037 . + . ID=g913.t1.exon3;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 20963 21037 . + 2 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 21169 21296 . + . ID=g913.t1.exon4;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 21169 21296 . + 2 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 21429 21578 . + . ID=g913.t1.exon5;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 21429 21578 . + 0 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 21793 21852 . + . ID=g913.t1.exon6;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 21793 21852 . + 0 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 22156 22189 . + . ID=g913.t1.exon7;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 22156 22189 . + 0 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 22394 22474 . + . ID=g913.t1.exon8;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 22394 22474 . + 2 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 22706 22899 . + . ID=g913.t1.exon9;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 22706 22899 . + 2 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 23169 23317 . + . ID=g913.t1.exon10;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 23169 23317 . + 0 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 23498 23596 . + . ID=g913.t1.exon11;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 23498 23596 . + 1 ID=cds.g913.t1;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . exon 23749 23957 . + . ID=g913.t1.exon12;Parent=g913.t1 NODE_423_length_24015_cov_42.6669 . CDS 23749 23957 . + 1 ID=cds.g913.t1;Parent=g913.t1;3_prime_partial=true #PROT g913.t1 g913 MVLHETLRMYTSLDRFVFEPVGVSGASMEVDRVSQKIAAVDKPRTSDSTVRDICGIIGIIRLLGGPYLIIVTKRKKVGRVYGADVWKATETEVIPFARHTRHLTEAEDTEERMYLSMLNSVLGSDAFYYSYSYDLTHSMQRIHGSDERFKQASISDRADHRFYWNRHLQDDFSSIPELKNFVLPVMHGFVSINPCAIKNKPFDFIIITRRSCLRQGTRFNARGIDEFGNVANFAETEQIVHHNGVYTSYVQIRGSIPLFWTQLPNIKYKPSVRVDSQADHVTACRAHLSEVVTYYGPTVLINLIDQKGSELALGQAFANTLKTVNHQQARYVAFDFHHECRKMRWDKLSLLMDQIASDFDKQGYFQLDRNGTVLSRQTGTFRTNCIDCLDRTNVVQSMIAHKTLAQQLIGLEITSPGDVLDRQTDFEFRFKN # ORIGINAL: g6899.t1 original gene structure, not modified by PASA NODE_1413_length_11488_cov_53.8285 AUGUSTUS gene 4132 5419 . + . ID=g6899;Name=g6899.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS mRNA 4132 5419 . + . ID=g6899.t1;Parent=g6899;Name=g6899.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 4132 4315 . + . ID=g6899.t1.exon1;Parent=g6899.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 4132 4315 . + 0 ID=cds.g6899.t1;Parent=g6899.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 4587 5419 . + . ID=g6899.t1.exon2;Parent=g6899.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 4587 5419 . + 2 ID=cds.g6899.t1;Parent=g6899.t1 #PROT g6899.t1 g6899 MEGMNTLASAAAVVLSPCPFVCSHCPRTFQSSDELNEHVSKLHFALNPVSMEGLTPLFTSTVTGRTPDLNSFLNACAAALRQNGMSATAELSKNPFEESFSRVMESDRPSHPQLQRQISQQHAALIPQNSDALSAIFNLKAPPSLTIPGSASGSAAVNAAALAVNNAKMQLKSQIASKVSRKKAMAESQAALKLSLVPEVAGSPATVGSGQSPHGLGDPSLADSTMSSDSNDASGPARKRVRTDPNLSSDSKTRARELNREAAAKCRKRKKQLFEELKTKAERLEATNESMAGEMAQMREELAVLRAFVSTIMEQVQSNGQQQQQQQDGKEGDDAAAQ* # ORIGINAL: g6900.t1 original gene structure, not modified by PASA NODE_1413_length_11488_cov_53.8285 AUGUSTUS gene 6306 11300 . - . ID=g6900;Name=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS mRNA 6306 11300 . - . ID=g6900.t1;Parent=g6900;Name=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 11254 11300 . - . ID=g6900.t1.exon1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 11254 11300 . - 0 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 10661 10767 . - . ID=g6900.t1.exon2;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 10661 10767 . - 1 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 10275 10417 . - . ID=g6900.t1.exon3;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 10275 10417 . - 2 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 9635 9925 . - . ID=g6900.t1.exon4;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 9635 9925 . - 0 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 9278 9363 . - . ID=g6900.t1.exon5;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 9278 9363 . - 0 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 8824 9057 . - . ID=g6900.t1.exon6;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 8824 9057 . - 1 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 7424 8433 . - . ID=g6900.t1.exon7;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 7424 8433 . - 1 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 7110 7266 . - . ID=g6900.t1.exon8;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 7110 7266 . - 2 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 6729 6879 . - . ID=g6900.t1.exon9;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 6729 6879 . - 1 ID=cds.g6900.t1;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 6306 6566 . - . ID=g6900.t1.exon10;Parent=g6900.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 6306 6566 . - 0 ID=cds.g6900.t1;Parent=g6900.t1 #PROT g6900.t1 g6900 MPRMHNPSGPERTVVPANYTYTPLADVEIGKEVNVYGVVSFMKQPYKTKGTDLCMNVNIIDPSLPHPDDGIKCHLFRGTIDSFPEILSIGDIVRFHRLKITQYNGRTQGNCGRGFANVVFPCPGSDATLPFRHNSAMHTITPEDTLHAQRLRDWASSQLGVLFADTSAGAGPAVPLPETATLSSVGTASRFSLVCKLVSMSGAQDPPFVQLRICDGTVPQDTLPCLRYDASPVCAQPIAVDVLCVQRHPYTCRSLVPGSFLLLRGVTIRTMATGTVSLELDSMCTGGIAVLSPDDRACKDVDERITALHESGAIVDDLVALANVAWEPSQSSQPAADAVDDAQNDAEQMDIADMEAGPTTQAHPDRGSESSADDASSGDGDTDDRVSGQATPGDSDPVVSSGDVDPDLMPRTQAFVHDSSSDDDVFERARQEKTPTNATNRKSRWNPNISTHGDGGAAVASGAPGEPSADGGDGGEGAHVPLMGGGAKKRTRFTDAVMFLAQRNASESDDGIDDEGAPATQAATQEQPQQAPHQHLQQHTQPQPQQLQQQQQQQQQQQSLSKSSTAPPPLQTNATQKQPPPRVQHSAAAAPNVANILNAPPTTTPHAGQGLVAPSQHVRPAVPAAHGARRGNDQNASPTRILHEDRPIVTLRDVMSDPNQCGKARCRVAVTGHRPLTLKEFSRLICSSCNNEIESVPGRSAASASCTHCADGGESRWIFAFCLTIEDKSRSSVELIVYGEDAEVFLLGIPPGNLSVDNWTRALVRRRLKRLVQPNTWVDCCIKWYEPDVDSSVDDGGGGSGGGGVGPHPRRKLRVFGTMLPDGDAGDT* # PASA_UPDATE: g6898.t1, single gene model update, valid-1, status:[pasa:asmbl_1513,status:12], valid-1 NODE_1413_length_11488_cov_53.8285 . gene 2142 3033 . + . ID=g6898;Name=g6898.t1 NODE_1413_length_11488_cov_53.8285 . mRNA 2142 3033 . + . ID=g6898.t1;Parent=g6898;Name=g6898.t1 NODE_1413_length_11488_cov_53.8285 . five_prime_UTR 2142 2228 . + . ID=g6898.t1.utr5p1;Parent=g6898.t1 NODE_1413_length_11488_cov_53.8285 . exon 2142 2699 . + . ID=g6898.t1.exon1;Parent=g6898.t1 NODE_1413_length_11488_cov_53.8285 . CDS 2229 2699 . + 0 ID=cds.g6898.t1;Parent=g6898.t1 NODE_1413_length_11488_cov_53.8285 . exon 2842 3033 . + . ID=g6898.t1.exon2;Parent=g6898.t1 NODE_1413_length_11488_cov_53.8285 . CDS 2842 3000 . + 0 ID=cds.g6898.t1;Parent=g6898.t1 NODE_1413_length_11488_cov_53.8285 . three_prime_UTR 3001 3033 . + . ID=g6898.t1.utr3p1;Parent=g6898.t1 #PROT g6898.t1 g6898 METIVTSRAAGVQHIPDGAAVVIHEAPLGSGRSLAEAQLADVDASLITVSPNPPREHLVELARHIERADVTLRAAVGSKLQQIVDQIRYLQEQAHNIMQDARRDADLHKAACNFQKRPGSTYHLYRKTDGTPYISMLSPEEWGPSTPHEFLGSYKLEYDSTWTPLEKVVERGDREAFVNRLLGPSMITFDGVSPAEVAGRITNARLDKN* # ORIGINAL: g6897.t1 original gene structure, not modified by PASA NODE_1413_length_11488_cov_53.8285 AUGUSTUS gene 202 341 . - . ID=g6897;Name=g6897.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS mRNA 202 341 . - . ID=g6897.t1;Parent=g6897;Name=g6897.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS exon 202 341 . - . ID=g6897.t1.exon1;Parent=g6897.t1 NODE_1413_length_11488_cov_53.8285 AUGUSTUS CDS 202 341 . - 0 ID=cds.g6897.t1;Parent=g6897.t1 #PROT g6897.t1 g6897 MFGLKREDADAQNGTTDILERKGLVSCEHTDIVRRIVCSEARVYSV # ORIGINAL: g8835.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 3738 11765 . - . ID=g8835;Name=g8835.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 3738 11765 . - . ID=g8835.t1;Parent=g8835;Name=g8835.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 3738 11765 . - . ID=g8835.t1.exon1;Parent=g8835.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 3738 11765 . - 0 ID=cds.g8835.t1;Parent=g8835.t1 #PROT g8835.t1 g8835 MRRAIFVVAVVVLAATASVSGLEPANSKCSTPTYLSDYSKGQNGIKDGRILGKYDFEVDGEDVVYRDLNGNEFTCPVPDTEPKNVGGDVWFRLRPDNDLQYEINTCVNVQKGENPVPKTFLNVFVGEYCESLQCAPGVVVNGPNSDKEFTCGEGQVESRVAFRAHRGTSYFVMINPEVKEVARREIGDLQSSFELQLKRWACNQKPTICGFCHENSGDCASDGCLAPYVFNEDSSSCVLPLALTYPSIIPIEGEVFDFRLLADSVEGGVQESDEVEWYFRYEREKEKTSLTDHALTSGLNSPIKIETLADGQRQLRIQRAFSNWQKYLFSVEIVRKDKDGKVVFDLVSNEYRVILQSLRVFTGIPTASLEADKSINIYWDSKYNYPGFSRYLFSAVGVTGAPATTRYYLTAPNYQSVSDAGAVGVAPTLKANAVVAGMTVDIATDVGNQYFEFVCDHVVLKFKRVAGTTLADTANDVRGNLIRSLLQPALAAKFPSNDVNAPAQFGVRISNIITPGNADYEVNLYARDFRTGNPVSASDIIKAIDWNGATPGVSIFTPQRAKLGDLQVGTATEGPVGTITPEPFCTILSSENAYIEMTAAKTIVARAPTSTLNIGARWRKVVGDNQEGLTAPWESRIYLESMATFEADDTKRFLTATGAGTPLSFTFTTDTKAKATLFEITSNVGWFIINGGGDKTIQYTSQKCSIRAFGDSQLKTDSRPSSCKFQSNNNGYGNDPTYRRFEIDLNGEFSINSIALSSLIYGLKLDTSNTRYLKIAGRLTTAEAYTDLTPAMSFANTALCSPNTKPLGCYNNRVLKFDTIRYVRSLAVPRPGMLGFRYLRVEFLDMQDDSTVLDFNTRFYTVERIVVEGSCACNAHSESCDISNGLCSVVAAAGSGYGHTELSAQPFGAQTVDQDAIYNCQHRTAGNKCDVCENGYFQAKSPNAPPPTPFITPTEIFDAKFKYPDLGDIIKDLLPDPETKALIFQNFFGPAICDADAALNEECTQLGQWTCNQCDCNGLGDGQWKGSSGTTCNTVSGVCNCHPDTNTNGDNCDDCNAGYCRALCYDFFDPLCLRAPCTECNCNLHSIRPNGFDPKKDVCNAAGCGCTCDPTHHVTGDSCEFCEEGYTSTTGNAVDGQTCNACACFGHKKLHSKNQDRDICDVLTADCENDAEGNPQECSGNTFGFSCEYCEADFWREGIDSDQEDKTDDCSPCSHCSLGAILTPFSEPYAEGSKGLCNPFGGDCFCDPDKNVEGRNCDVCKKGFWRSDEDAALGKACQACECNDHKTSVDNECHPSTGVCNYNGHDCEDNTEGDHCELCKAGFFRKGSGPWPKTLKCDGICYCAGNGGLTDDKRDNCNPDGGQCACTAESHTINFNCDECADTYFFIRANPNVKLVPGNVCDPCSTRCYGHSSTCTKDKGICSGCADGTANGVASRCETCPTGKKRDLSNPKADFINTSVFTFPFTAPQLETMKEVNCIPCACNSHSTTCNSLTGACTNCADNTQNGAAFACESCKTDFFRRIDPLPGGDTCGVFALATAIPAGQTLASACTSCNVACFLSGSGGKCAETTGICTTCPPNQEGSRCERCSKGFFGAPHLGIPCRACPCFTHAKARNFGAMSDALIGQPLKCWHQTFPLVTNECVLNMALMTVTNINNIKADNTKADNFVQCACQEDTVGNNYQTGLLINDESIYKNARCSSCNFVRYYGDATKCIEGSCSKYEECKDCKCNSNIDLTGVADNCLAQSTQSCQNCLGNTAGTNCEQCSNGYYGDATRQDVTFADKCFKCKCNGQSVVRVKDGNNNDIDLHPGDTCSATNNVKTAVGQYSCTCKTGYVGPTCSQCDITYKKTTFVSGGETYVLCTPCDSCTQDLYKNQILPQNARLTAAENLLTQINGTVSMYIGLDGSILTASLAALGASIADANQKVEDAEAAIATASNDVVTKFNTLTASYESATQDIKDLDAALTEQSTNVHNAITEVQTDVDTLKTDLGLLTTKVAGLVKDNEDASAQLLALDGKFMENGDAIDALKENEVTVDLAIKTQSAELKQAEDNLAALTVRVKATEDVSTAFDGRLDTVETTVGQLANDIGDAKTALDVHNSDIKRSEGDIVALTTRVDKIDVVVDQTITKSLTNILASLKSIDDRVTELEALTTPCGTKPCPGNKKCRNLDRDNHQCYCRPDQIELADRCFDNINLCDTANPCLNGATCIGNDLFATCLCAPGFYGDNCEKTIDVCESAPCHNGGTCAPDAADSFTCTCPEGFSGANCEIKNVLRIASGQYFAYPKNSPNRFVDWSLEVTFATTSRLGTLFVSYYDTVVKTGAAAGDYASLQVGSDGRLYFTASPALTFRVGQTNKFTGNTVVGNLDGPIVSDGKVYRARLAINKNHAEFEVFAEGNNVPIYSNTNIDINQPGGTTIDSTGPLYFGKLVTATAIVPDFLTNALAVDISAIVINGVPQDLKTPKFASTPAPAIVSPVGGAAARLALRQPDGVASFAPVRVLGNSFTIKTKAIVDGQDISGAIFAGRDDEGDRFIVLEVNRKTFKLSWHTSHADEMFLGSVSVDATYVRGDTLDIVVVGAPQEKDVNNPLVSPGLALTLSVSVNGKAAVVDSGATTGPFQSLEYSALFIGGVPADFEITPVTSNDAWLTFVNFIVNDAATNFAAPIIAGAGATVVYA* # ORIGINAL: g8834.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 109 3049 . + . ID=g8834;Name=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 109 3049 . + . ID=g8834.t1;Parent=g8834;Name=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 109 231 . + . ID=g8834.t1.exon1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 109 231 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 408 482 . + . ID=g8834.t1.exon2;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 408 482 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 715 1044 . + . ID=g8834.t1.exon3;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 715 1044 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 1346 1504 . + . ID=g8834.t1.exon4;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 1346 1504 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 1841 1948 . + . ID=g8834.t1.exon5;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 1841 1948 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 2248 2369 . + . ID=g8834.t1.exon6;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 2248 2369 . + 0 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 2494 2625 . + . ID=g8834.t1.exon7;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 2494 2625 . + 1 ID=cds.g8834.t1;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 2947 3049 . + . ID=g8834.t1.exon8;Parent=g8834.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 2947 3049 . + 1 ID=cds.g8834.t1;Parent=g8834.t1 #PROT g8834.t1 g8834 QTLSQEKALFDFRQADVPPLLLILDRRDDPVTPLLTQWTYQAMVHELFGIKNNRVICPGKKERDDKNLEIILSAEQDEFYRGNMYQNFGDIGASIKKLVTEFQERTKSHQNIETIADMKAFVESYPQFKQMSGTVSKHVNLVGEMSRLVDEESLLQLSEVEQELSSSGIDHTNALQKVLSVISDLQTSPANKLRVGLLYALRYERNSSNDIPGVIDALARHGVGQDALGLMGSVIQYAGNNVRSSDLFGTKSIISMTKKIAKGLKGVENIYTQHEPLLAETLDQLVKGKLKDVAFPFATANQFRDRPQDVIVFMVGGATFEESRTVDKFNSTFQGLRVILAGTTVHNSESFLEEVRLSVQQTSALSGGRFGVQKARAMARTNQ* # ORIGINAL: g8839.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 27217 29993 . - . ID=g8839;Name=g8839.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 27217 29993 . - . ID=g8839.t1;Parent=g8839;Name=g8839.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 29608 29993 . - . ID=g8839.t1.exon1;Parent=g8839.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 29608 29993 . - 0 ID=cds.g8839.t1;Parent=g8839.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 27217 29410 . - . ID=g8839.t1.exon2;Parent=g8839.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 27217 29410 . - 1 ID=cds.g8839.t1;Parent=g8839.t1 #PROT g8839.t1 g8839 MPPSHTAPGAGVMPVDEPPDNSASSKNFVSVAETNTLTAQRILHTAPTSQHERHVRQQPPLVVQPSYLLVWGSGEHGQNATETQCDVEPAAAAPLTLSAPKSVACGSSHTCIVTHSGEIFAWGNGTSGQPSDESAVVGLACGNRFTVVWTAAGNCYGFGSNYNAQLGYNFSETEFKRSPVIPRAISVCSRPVRSVACGSKHSVFVIDDGSVYSCGGGGEGQLGHGTRADEACPRKITSLEGVLVTQVACGTAHTVALCSAGTMYIWGSRVACGQSGDAMTPTPLAGLAEGACLRVACGGTHSLAIAEGGVVYSWGRGQHGQLGHGKDVINVPRPRAIAALKGARVASIGAGEWFSVALSCDGASAHIWGRNTNNVVCAEEGRVGESRLCVWEPMVCEAPKGMLYADVACGGWHAAAILRPRPAPTLKHSSPAAKGAASVALASAADPQSEKQRRIAYYRAVMDEPLIASIPKKAATQQQSTEVSPANATPLTSILKTTLIVTNELGLADCPPGNVAVGNPATDSPGPSASGAAEAVVGTGDKPGLTRRLSSGIARPPTPPRPPSATGARPQSSQSTRSSSGRLSSASGSAISSTAGANAVGARVAHSDRGVLRTASSSPHSDAASLSLSGHAITICGGEDDQRGPAPKVRFSTEDSASASAMNGASSAAAVAAVSMTTTADVPRAEYQPSGRLLHKRSQTARPKSAHPSSPLAADAAERNNAHDDADRAQGDTPAVAGVSSPPGGRLLQRPKSARPRLHATTDGDAGGNHPAILVAADETPKRVKLQSRLEGVRRLYSKPSVAQEKLLKLLHKFDGDGDGDGDDDLAAIGGDLCDFPDTPIGPITPQPNLEKKSSRTNL* # ORIGINAL: g8837.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 18280 20816 . - . ID=g8837;Name=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 18280 20816 . - . ID=g8837.t1;Parent=g8837;Name=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 19434 20816 . - . ID=g8837.t1.exon1;Parent=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 19434 20816 . - 0 ID=cds.g8837.t1;Parent=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 18747 19222 . - . ID=g8837.t1.exon2;Parent=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 18747 19222 . - 0 ID=cds.g8837.t1;Parent=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 18280 18538 . - . ID=g8837.t1.exon3;Parent=g8837.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 18280 18538 . - 1 ID=cds.g8837.t1;Parent=g8837.t1 #PROT g8837.t1 g8837 MARGRGRGSARGGGGRGGRGGGSRGGGGRGGSPASFGGSRGGGGRKDSAPRRGPPARGNAGTFESGSEDGGVYDDVDVFNRRREKQMVAGLDEEKEDGSDLDDDEAVMGVGESDGSDDDSDDDASGDEDDESGSGEEFDENKFDAQWGKKRSAYYNTDYVDADLGHSTDDDEAAEEEEREARNLQRKQAQMMTDADFEVPDASFGEQLKKGKKAASKKKAAAADDDDIEHEAVQRDVSALSKAEKLDLIAKDSPELIELLSEFRDKLSAVEGQLVPLLDRVKGGDVATSKGVSYLEVKFHLLLSYLVNIAFYLLLKAEGRSVKDHPVIAQLVSLRAVIEKLRPLDHKLKYQIDKLIRSAAGAGNGASSEDPLRFKPNLAAMGGDSDEDEDNGKGQHADDSDESDDADGKYVARKMLAVPYEDDSKGGKKRAKEDKLKQRALKSSVIRELRAELSDKPDEIKHPRQCLPLRLTITYRSNFPQDPTGIEYEDDEDPDEVEHRRRYEEDNFIRLDGNKKRKGINQRRLKNELEELTDFGDIAALARPSRGEDPADQLLKRRSAAEAFATEENNRRKQQKARAEGGSNKRKAAIEEVGSDEDAYYEEVKAKRAKVREEREEANRPSMEDASEESVEGKRGINYQMQKNKGLTPRRKKEQRNPRLKHRVKYQKALIKRKSQVREYSAPRGPYGGESTGIRSGIVKSVPIK* # ORIGINAL: g8836.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 13861 17925 . + . ID=g8836;Name=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 13861 17925 . + . ID=g8836.t1;Parent=g8836;Name=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 13861 14458 . + . ID=g8836.t1.exon1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 13861 14458 . + 0 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 14631 14789 . + . ID=g8836.t1.exon2;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 14631 14789 . + 2 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 15006 15129 . + . ID=g8836.t1.exon3;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 15006 15129 . + 2 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 15313 15442 . + . ID=g8836.t1.exon4;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 15313 15442 . + 1 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 15580 15674 . + . ID=g8836.t1.exon5;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 15580 15674 . + 0 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 15796 16158 . + . ID=g8836.t1.exon6;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 15796 16158 . + 1 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 16256 16345 . + . ID=g8836.t1.exon7;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 16256 16345 . + 1 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 16432 17164 . + . ID=g8836.t1.exon8;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 16432 17164 . + 1 ID=cds.g8836.t1;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 17314 17925 . + . ID=g8836.t1.exon9;Parent=g8836.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 17314 17925 . + 0 ID=cds.g8836.t1;Parent=g8836.t1 #PROT g8836.t1 g8836 MRRAGLSRVKREPLHAPGCSSGEGNQSVRSLASFVPPRRAAPLFDHNEIFTKENDEGVHSRTSSGVDEATVVKPDRTREPPSGVASIRACQRAFKAENGNNEANLSGSFAAISHQRGVGGLNEPQRRAVEHTSGALVVLAGPGSGKTQVLCRRTAWLVETTHTRPESLLLLTFSNKAAKEMRTRLGRFVSADVVARIPIGTFHAISVAYLRQYGSKIGVTRDFGICDDDCRRKVIKEALDGYVGKEERRRLAGVLGQVISSCKGSGKRLVDANMNDVAVQLSMSAVAATEILARYDALLAAQNKLDFDDLLVRALELIVATPSLAQAISHVLVDEFQDTNVVQCKLAIALASASGNITIVGDPNQTIYEWRGASAENFSRIGESFSGRTVVRLVDNYRSQSSIVACANAIVRGKCYGGLDSLQMRASGHLSGVVQPVAMLSLGRDTSSSTALPRDEAGVVLAELRRLSRALPGLMPKHFAVLLRTNSMTRPFEEAFVRSGVPYRLLGGTRFLEREEVKDCLAYLAFVCNKADIVAFSRAVQVPNRGFGKKSIAALRSHCASAGISFADAFVPTHRAGVLAKIGAAQRSGVAEFLDTVDALDALLDRDEPLSLVYAEMIRLARLEEHYAKSSQRDSQGSQSSERVGNIQELGNAVREFEGRLATGTDSADAWRCGSAGSGFSAPSHVTARECLRLFLQSVSLNADSGGRQHGAHADGIVLATLHSSKGLEWPVVFVGGAVEGVLPTARPRNSVEGDAETDAAAQEEEERRLFFVGVTRAQHLLYLLLPNGAQPSRFLAALPTSQTSDCPPFIDDALGVALASTIGVGYRGLAEGEGTAEERDSAAAHANAHNASELLSTLGGFRSARGMLSAQPPQVASPPVRGAQLLINADTTHATHSAHIVHTTQANGPVDSIPAAFVGSARGGRDAIKTTGTKRRRTASDSQGTKTIRAFFKPAGRSTDDEEGAD* # ORIGINAL: g8840.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 30614 30949 . + . ID=g8840;Name=g8840.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 30614 30949 . + . ID=g8840.t1;Parent=g8840;Name=g8840.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 30614 30949 . + . ID=g8840.t1.exon1;Parent=g8840.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 30614 30949 . + 0 ID=cds.g8840.t1;Parent=g8840.t1 #PROT g8840.t1 g8840 MPFGTMSASTKLPSADAPSCSSCPLHPSTCAAAIESLSPAQKLIAYAHDEACKSNKDSYEDPKTGYSVFTAVFHHRRGKCCGNGCRHCPYGHEKVDTARKGVKQFNGCFFE* # ORIGINAL: g8838.t1 original gene structure, not modified by PASA NODE_164_length_33992_cov_43.8869 AUGUSTUS gene 22096 26330 . + . ID=g8838;Name=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS mRNA 22096 26330 . + . ID=g8838.t1;Parent=g8838;Name=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 22096 22621 . + . ID=g8838.t1.exon1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 22096 22621 . + 0 ID=cds.g8838.t1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 22879 23119 . + . ID=g8838.t1.exon2;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 22879 23119 . + 2 ID=cds.g8838.t1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 23546 25282 . + . ID=g8838.t1.exon3;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 23546 25282 . + 1 ID=cds.g8838.t1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 25466 25589 . + . ID=g8838.t1.exon4;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 25466 25589 . + 1 ID=cds.g8838.t1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 25717 25939 . + . ID=g8838.t1.exon5;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 25717 25939 . + 0 ID=cds.g8838.t1;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS exon 26071 26330 . + . ID=g8838.t1.exon6;Parent=g8838.t1 NODE_164_length_33992_cov_43.8869 AUGUSTUS CDS 26071 26330 . + 2 ID=cds.g8838.t1;Parent=g8838.t1 #PROT g8838.t1 g8838 MAVVPYGPTLAPDNLPPLLELDGQTGASGPSDGAAGGHRSSPVEVVDLTGGVSGPGKRQREEDELEQALHISKSQVHEDEDANIRKAMAESLASHNSATEETAMMLYKMASGPVSSNPYDNAQIEGMPAGLVNCGNTCYFNALVQIFFSLIDLRNCVLSVDPTVIDAINAGGETSSRGGQQARFLHELQRLFAFMVHTRRRFIDPSGLLGAIIGNTGQPIAIGDQQDVIEFNDVFIKRAEEAFEKVKVDDANPIKQLFYGRTRVTVLCPETADESHSESTMTEEFLHIIAPVEECRTVYDSLDQFTAASDIEDFETPSGRRVRARREVWIESAPPVLMIQLQRARYNAQLGVTEKLNTPLEYCKTLFMERYMADQKERTREIRARIDVLRQRRARLSNLLQSHANFQGSGVAIDAILRMSASYIAGAGEKGEDGGLYGACVELSSQASQYSQLPPSEAHTETTRELLITHADLCETCMSNLRSDIANVDVEISHMFDGMCNLPYELRGVLVHDGQAGVGHYWAYICDDSQTWRKFNDTNVSVVSEQDVYLESVGGHRNASAYCLVYVDRQREGGLRQIADALVAVVDADNQKLLDELATWDAAHAPVPLSQQSTASGDAVHVPAETSCDASAVPMEVQYADYNNEVAGESSPPPLFADGPMAPPDGAVQPQSVHAHVPLDTPMTVAPTARRPSKHSASNVLPLVVSVRIVINEGEWPTAYRRDVARYSRLFNDVSPASILGGLPLYLHAATKESSASPLFQRAIVEGLVVRVTGRGISHLNDIEQANLSIVCKSVGVCLEIPCPPAFRAMMRAFRVCQKAALHFALAVEAVDKESGSYVQFCHAFHAARYNMQLVLNQQPSLPMAVFSAALGEAIKAYLGDAFRALNDGHAGGDGAGLRESLQTATAAVRALRLFASPTNSPVGRILDGSQLNSIQTEWMELAENLQTNEGLCASVPALVTALVADPEDVVSGVDTPYAPDALGRAFSRRAKDLGIATLVEKETVQMLESADPEYVATLFRSASAAFKERPVMSVA* # PASA_UPDATE: g8841.t1, single gene model update, valid-1, status:[pasa:asmbl_2236,status:3], valid-1 NODE_164_length_33992_cov_43.8869 . gene 31182 32875 . - . ID=g8841;Name=g8841.t1 NODE_164_length_33992_cov_43.8869 . mRNA 31182 32875 . - . ID=g8841.t1;Parent=g8841;Name=g8841.t1 NODE_164_length_33992_cov_43.8869 . five_prime_UTR 32828 32875 . - . ID=g8841.t1.utr5p1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 32717 32875 . - . ID=g8841.t1.exon1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 32717 32827 . - 0 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 32466 32584 . - . ID=g8841.t1.exon2;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 32466 32584 . - 0 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 32140 32285 . - . ID=g8841.t1.exon3;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 32140 32285 . - 1 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 31863 31974 . - . ID=g8841.t1.exon4;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 31863 31974 . - 2 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 31485 31559 . - . ID=g8841.t1.exon5;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 31485 31559 . - 1 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . exon 31182 31320 . - . ID=g8841.t1.exon6;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . CDS 31260 31320 . - 1 ID=cds.g8841.t1;Parent=g8841.t1 NODE_164_length_33992_cov_43.8869 . three_prime_UTR 31182 31259 . - . ID=g8841.t1.utr3p1;Parent=g8841.t1 #PROT g8841.t1 g8841 MAVDASELLAHIPINFSDQQLWIAVGCVIFNPLMWNIVARREHHTRFLTHLCFGSKYAACYLLAACIFSLGLFRDNQFGLAILSQPKLAELDTPVIKYCGGGLIGLGMLFVVSSTWSLGITGTFLGDYCGILMDARVTGFPFNVLDNPMYWGSTMAFVGASLWHASPAGLFISAVVALVYQVALAFEGPFTAEIYRQRDLKRTKKSK* # ORIGINAL: g3459.t1 original gene structure, not modified by PASA NODE_5600_length_784_cov_29.0578 AUGUSTUS gene 181 585 . + . ID=g3459;Name=g3459.t1 NODE_5600_length_784_cov_29.0578 AUGUSTUS mRNA 181 585 . + . ID=g3459.t1;Parent=g3459;Name=g3459.t1 NODE_5600_length_784_cov_29.0578 AUGUSTUS exon 181 331 . + . ID=g3459.t1.exon1;Parent=g3459.t1 NODE_5600_length_784_cov_29.0578 AUGUSTUS CDS 181 331 . + 0 ID=cds.g3459.t1;Parent=g3459.t1 NODE_5600_length_784_cov_29.0578 AUGUSTUS exon 463 585 . + . ID=g3459.t1.exon2;Parent=g3459.t1 NODE_5600_length_784_cov_29.0578 AUGUSTUS CDS 463 585 . + 2 ID=cds.g3459.t1;Parent=g3459.t1 #PROT g3459.t1 g3459 THEEAVTELVADLVNSYRQLPLRLYQMDRKFRDEARPRAGLMRGREFWMKDMYTFDVSNNDAFATYAHVARAYKRIFKRLDLKFVQALADT # ORIGINAL: g10322.t1 original gene structure, not modified by PASA NODE_2926_length_4724_cov_39.3203 AUGUSTUS gene 3791 4384 . - . ID=g10322;Name=g10322.t1 NODE_2926_length_4724_cov_39.3203 AUGUSTUS mRNA 3791 4384 . - . ID=g10322.t1;Parent=g10322;Name=g10322.t1 NODE_2926_length_4724_cov_39.3203 AUGUSTUS exon 3791 4384 . - . ID=g10322.t1.exon1;Parent=g10322.t1 NODE_2926_length_4724_cov_39.3203 AUGUSTUS CDS 3791 4384 . - 0 ID=cds.g10322.t1;Parent=g10322.t1 #PROT g10322.t1 g10322 MSAPRGCPPSVSESMESCWRARAETRPTFSQLVLQLRRAMLVFSTARIESEYAVDGTNPGEGGDTLRLSASIGERRFTKDNSGRAYSVGAPDKAAKRQTYAPNSSAELGTKFYASPQPPPVALEPVNGSYVVYDPDAADSDDNTDEPDPAGGREASKFAANLSGLTSAAGGADTAPADSGSAYVCVELDDARGVDAN* # PASA_UPDATE: g10321.t1, single gene model update, valid-1, status:[pasa:asmbl_5247,status:12], valid-1 NODE_2926_length_4724_cov_39.3203 . gene 294 3571 . + . ID=g10321;Name=g10321.t1 NODE_2926_length_4724_cov_39.3203 . mRNA 294 3571 . + . ID=g10321.t1;Parent=g10321;Name=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 294 413 . + . ID=g10321.t1.exon1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 294 413 . + 0 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 907 953 . + . ID=g10321.t1.exon2;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 907 953 . + 0 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 1359 1414 . + . ID=g10321.t1.exon3;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 1359 1414 . + 1 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 1649 1734 . + . ID=g10321.t1.exon4;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 1649 1734 . + 2 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 2175 2228 . + . ID=g10321.t1.exon5;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 2175 2228 . + 0 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 2530 2556 . + . ID=g10321.t1.exon6;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 2530 2556 . + 0 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . exon 2702 3571 . + . ID=g10321.t1.exon7;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . CDS 2702 3454 . + 0 ID=cds.g10321.t1;Parent=g10321.t1 NODE_2926_length_4724_cov_39.3203 . three_prime_UTR 3455 3571 . + . ID=g10321.t1.utr3p1;Parent=g10321.t1 #PROT g10321.t1 g10321 MLIVLEYVPYGNLKRFTELIPLSQQRSRVTISLLGLLSHQIALGMEYLHSVAVVHRDLAARNVMIGQNAFGEYQAKVADFGLSRNTENSYYRKAKHGGKIAAKWMAIECLTRKLYTEKSDVWSYGVTIWEAFSFGEFPYAGISNGDVLAYLAQGHRLARPPACPQDVYALLLRCWDMSPTSRPTFSDIVAMTSGVEYQEVVDMPVGLPITTGMKMSGSPSFSGTQTDGGQMGGRRHSSFQAIKDSVVSWTMRRATGLQRRESNAAHSNPLRSQGSSSGIELSSRGDYAVKSIEMALRTNPYTNLQYSLEDGGTGPDSRTPMIGGKLHEDIDEPEDEGGRVIQADGAASLACSAVEGRKGTMKSVASPFSLSLQQAYDNDV* # ORIGINAL: g10466.t1 original gene structure, not modified by PASA NODE_446_length_23557_cov_43.2431 AUGUSTUS gene 867 2953 . + . ID=g10466;Name=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS mRNA 867 2953 . + . ID=g10466.t1;Parent=g10466;Name=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 867 924 . + . ID=g10466.t1.exon1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 867 924 . + 0 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 1102 1193 . + . ID=g10466.t1.exon2;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 1102 1193 . + 2 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 1392 1494 . + . ID=g10466.t1.exon3;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 1392 1494 . + 0 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 1681 1833 . + . ID=g10466.t1.exon4;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 1681 1833 . + 2 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 2103 2166 . + . ID=g10466.t1.exon5;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 2103 2166 . + 2 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 2368 2458 . + . ID=g10466.t1.exon6;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 2368 2458 . + 1 ID=cds.g10466.t1;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 2780 2953 . + . ID=g10466.t1.exon7;Parent=g10466.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 2780 2953 . + 0 ID=cds.g10466.t1;Parent=g10466.t1 #PROT g10466.t1 g10466 MIDLETANVTNAQLGGLLPESLENWKSNARKAVWLRIPNARSDAISIAIKNGFDFHHAVPGYAMLNKWLPSTPNKIPPFASHTVGVGGFVLNDKNEMLVIKERNAEKPFWKLPGGLSDLGEEFGETAVREVREETGVLSEFKSLFAFRHQHNWAFGRSDLYVVCRLKALTTEITIDESEIGDCRWMSVDEYVRISPHMMNRFVGRMLAADLEGRLDMRETELESMYAKGKFFKVYHPQLNVPMD* # PASA_UPDATE: g10469.t1, single gene model update, valid-1, status:[pasa:asmbl_7344,status:12], valid-1 NODE_446_length_23557_cov_43.2431 . gene 11981 12515 . - . ID=g10469;Name=g10469.t1 NODE_446_length_23557_cov_43.2431 . mRNA 11981 12515 . - . ID=g10469.t1;Parent=g10469;Name=g10469.t1 NODE_446_length_23557_cov_43.2431 . five_prime_UTR 12462 12515 . - . ID=g10469.t1.utr5p1;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . exon 12361 12515 . - . ID=g10469.t1.exon1;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . CDS 12361 12461 . - 0 ID=cds.g10469.t1;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . exon 12154 12229 . - . ID=g10469.t1.exon2;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . CDS 12154 12229 . - 1 ID=cds.g10469.t1;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . exon 11981 12047 . - . ID=g10469.t1.exon3;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . CDS 12006 12047 . - 0 ID=cds.g10469.t1;Parent=g10469.t1 NODE_446_length_23557_cov_43.2431 . three_prime_UTR 11981 12005 . - . ID=g10469.t1.utr3p1;Parent=g10469.t1 #PROT g10469.t1 g10469 MSTACSGLRQELVECIRASDCFTVEKKKFKDCLQRENDGSVPPSCRALQTAFFECKRGMLDMRNRMRGNKGY* # ORIGINAL: g10467.t1 original gene structure, not modified by PASA NODE_446_length_23557_cov_43.2431 AUGUSTUS gene 3711 5371 . + . ID=g10467;Name=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS mRNA 3711 5371 . + . ID=g10467.t1;Parent=g10467;Name=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 3711 3787 . + . ID=g10467.t1.exon1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 3711 3787 . + 0 ID=cds.g10467.t1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 3947 4035 . + . ID=g10467.t1.exon2;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 3947 4035 . + 1 ID=cds.g10467.t1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 4269 4360 . + . ID=g10467.t1.exon3;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 4269 4360 . + 2 ID=cds.g10467.t1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 4510 4573 . + . ID=g10467.t1.exon4;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 4510 4573 . + 0 ID=cds.g10467.t1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 5081 5173 . + . ID=g10467.t1.exon5;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 5081 5173 . + 2 ID=cds.g10467.t1;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 5331 5371 . + . ID=g10467.t1.exon6;Parent=g10467.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 5331 5371 . + 2 ID=cds.g10467.t1;Parent=g10467.t1 #PROT g10467.t1 g10467 MCGILAIFGYQGTEDLRRLAVELSLRQRHRGPDWSGVRIIGNNAIAHERLAIVDLAETGAQPLATENGDIILTVNGEIYNHVALKQELKTPYNFATNSDCEVIIPLVFDPPAWIVKNSWSSKWGLGGYLYIAMDRDMCLIGDGGGYYVRFG* # PASA_UPDATE: g10468.t1, single gene model update, valid-1, status:[pasa:asmbl_7345,status:3], valid-1 NODE_446_length_23557_cov_43.2431 . gene 5639 11943 . + . ID=g10468;Name=g10468.t1 NODE_446_length_23557_cov_43.2431 . mRNA 5639 11943 . + . ID=g10468.t1;Parent=g10468;Name=g10468.t1 NODE_446_length_23557_cov_43.2431 . five_prime_UTR 5639 5892 . + . ID=g10468.t1.utr5p1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 5639 6096 . + . ID=g10468.t1.exon1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 5893 6096 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 6254 6391 . + . ID=g10468.t1.exon2;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 6254 6391 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 6638 7166 . + . ID=g10468.t1.exon3;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 6638 7166 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 7592 7687 . + . ID=g10468.t1.exon4;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 7592 7687 . + 2 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 7988 8166 . + . ID=g10468.t1.exon5;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 7988 8166 . + 2 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 8346 8867 . + . ID=g10468.t1.exon6;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 8346 8867 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 9083 9151 . + . ID=g10468.t1.exon7;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 9083 9151 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 9331 9724 . + . ID=g10468.t1.exon8;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 9331 9724 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 9860 10323 . + . ID=g10468.t1.exon9;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 9860 10323 . + 2 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 10435 11138 . + . ID=g10468.t1.exon10;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 10435 11138 . + 0 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . exon 11446 11943 . + . ID=g10468.t1.exon11;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . CDS 11446 11875 . + 1 ID=cds.g10468.t1;Parent=g10468.t1 NODE_446_length_23557_cov_43.2431 . three_prime_UTR 11876 11943 . + . ID=g10468.t1.utr3p1;Parent=g10468.t1 #PROT g10468.t1 g10468 MVSKFVWSALGSMRYNEKEVATFAITPSIPIDKKGHLWKKGEYGGGGFKKRWFTLKGNMLFYFKAPNEREAIGFIFLEGCVIESGKEAGMPHGIRLVFDGQGSRTYILCADTEEDQKAWITALQRSSYRYLRAQIASFIRMHPDLATAGDGGSQGQSSSSDGGTRLSLDAGQQFSTIHQTLASPRRARAATTSAAEAPAVPPLSMGRGFVQGTQGGRVMKSSSTPPPARGAGASGGSPSTQPQLQERPPIDEEDVAGMFEGDALSTASRQSLEEPALAGSDDALQENLSEAIEGHIATETSHTWSRAGFGGSMRNASVRSQAGGSVGSVPVRDDSWTCIEVSIGCLGLPLEREDKAPSTVAIVLISCAEDEWTEWARTEIVEDCASPDFEMSAVFGRADFQLLVPPAAGSAPGPLAGSSGSASLQFAHASQVFAAQSQSLPTASAAAASDTPLSLLQIPAAGMGLPPAVPLGGSFSASGAAVGGQPPGAQASEGRIPHRVRIEVRFVEGGDGSRLRPWYHADCLLEELAESDGVCMDLHNQDGKPCPPKISLTVVRTVGDSSCTGRRAAVIGRGSASKRNRKVRNAMDISRYRVPTIDGRKIVVEEQMEESRYALPVPVQLLRTLMTEDMPGVVELEEMGTLAGEYEILRRQLLEDRRQLLGAYRDGLSSLDAYRETTFKPSTAKKSKELQFVTTNCHGQRICVLTEKGTASYETVTLGAPAAHSLGFKKGGLKRLLSSTENGSLAGATAAALTRSPGVAVPGPSQCAAFYLRYRRCLVTDCVSTVERYCDAFANALLGLDVAAMQTVSFELHHSIMQLCEAWEDKTVEHSTRVALAAMPTAMEQMRTPAQCNKLSDGSQKLVQKVSGTGDESPDSPGVRNAVLVILGEIRENVAKISKEVLTVLSIALMQEVAQQPGVTELILRRDICFAQALSALVTCFSGSCAARLGNPLHPFWPRQIESIGYLAHFESLLSTIGDEQGMLEDMSVAVDDLCTVKFKFAAAASSGPTLPVTAGEWCAAVSGARGAIVVTLSLPADRFLQLTDALRRGRTVSVRAVLFTQGVNEAQTWANKMGDTTLQDTTNQQGFKMIESYCKEYFKFCFRVCVPGGYDVTQELRMLEILLSQLRMCTEPKKGKNVELLKLGEELARRMNGGRLTSCKSGKDRTSMAVTLEQCVILQQHHGMATSHLQVVLDAMRRDGTRRRNVAKNIGESMYAFNSLQIMTLPKLYRPPKGTFGSAQS* # ORIGINAL: g10470.t1 original gene structure, not modified by PASA NODE_446_length_23557_cov_43.2431 AUGUSTUS gene 13704 16970 . + . ID=g10470;Name=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS mRNA 13704 16970 . + . ID=g10470.t1;Parent=g10470;Name=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 13704 13787 . + . ID=g10470.t1.exon1;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 13704 13787 . + 0 ID=cds.g10470.t1;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 13941 14109 . + . ID=g10470.t1.exon2;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 13941 14109 . + 0 ID=cds.g10470.t1;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 14370 14495 . + . ID=g10470.t1.exon3;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 14370 14495 . + 2 ID=cds.g10470.t1;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 14773 16535 . + . ID=g10470.t1.exon4;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 14773 16535 . + 2 ID=cds.g10470.t1;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 16896 16970 . + . ID=g10470.t1.exon5;Parent=g10470.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 16896 16970 . + 0 ID=cds.g10470.t1;Parent=g10470.t1 #PROT g10470.t1 g10470 MAAALLFTTVVCAVLFFCQLFRGVYLPMLWWYVRETLHFDGFGSVPIGLCLAAYIAAPVAVTWGVLRGACRAGATNGPKLIRILCAGLAFCRLVEQVSRSALVDLHVSAVGSGLAIALVAIALSCAAAEGAAQLLQASFGIVVGLYADTAVRGLFDTVDLSSMRGFFPVAFVLVISAMLWQMAVFLDRWNLPVSPTPALAAAAPLASFAVGVVCGLVTYASFACLQLQTWASLKSDGRISPQMSLVLVAAASAASVPVAFWTLPAHHRASQSLSTGAGSILRRDPSTFTLGSLLVSGLCAIVPPGVTAVAAVVQLIPMAAACVVAPFACLRPLMLASDGLPSASPVTTTADAPLQHVQGSLHSALRLAVGYIGSVTVAVLCHTAVVQTGAALNPHALVSLALALAFAVRCWTCQQGADPAATSPGLFRSLRAPWAAVVVFLALALANPWLARPPPHALASPQLPTPQLGVVRVASWNLHMGISSAYRVDIYDAAAAVVASHADVIGLQEVSRGQLTNGGCDMLYALSRRTGYATRIYGPSYELTAGDAILSRLPALQSGSRQMRRFAGTQRQFAWGVFELNVGEMSSVDGGVKEGAGVDTEARADPLTVLFVATHLHHTTGAKGVEQRLSQIAEISAFAAEEEIHSARVIVGDMNSPEGGAEGAAFGESGLQDAWLTCSNATAVGHGGATHPAVTPTVRLDWIMYSHLSCLEVEVVPTVASDHRLIVAVFDAPTRQRR* # PASA_UPDATE: g10472.t1, single gene model update, valid-1, status:[pasa:asmbl_7346,status:12], valid-1 NODE_446_length_23557_cov_43.2431 . gene 21748 23429 . + . ID=g10472;Name=g10472.t1 NODE_446_length_23557_cov_43.2431 . mRNA 21748 23429 . + . ID=g10472.t1;Parent=g10472;Name=g10472.t1 NODE_446_length_23557_cov_43.2431 . five_prime_UTR 21748 21896 . + . ID=g10472.t1.utr5p1;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . exon 21748 21985 . + . ID=g10472.t1.exon1;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . CDS 21897 21985 . + 0 ID=cds.g10472.t1;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . exon 22108 22671 . + . ID=g10472.t1.exon2;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . CDS 22108 22671 . + 1 ID=cds.g10472.t1;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . exon 22847 23429 . + . ID=g10472.t1.exon3;Parent=g10472.t1 NODE_446_length_23557_cov_43.2431 . CDS 22847 23429 . + 1 ID=cds.g10472.t1;Parent=g10472.t1 #PROT g10472.t1 g10472 MDIVKLNVGGRIFCTSRATLTWVPESFFMSLLCGSIPSFKDADGAYFIDRDPDIFVPILNFLRTRMIPYNVPGLCFRTLRHEAVFYGITPLVERIDASRSLQRPSCGGLVFHCALAPPEGIADESASSDNSRGHVGDGHGGRDVTGDAPPSAAVRILASHHNWLAVGYLKRICLYSFKEASGWGLRFCSDTLGFEIDRLAINIKYGEGGERMVAIANRDRVILWDCGAQTAQSGPRTMATFSLSVAVDALFFIGSHLVAVSHTGRVAAWNSVSQHLQLQELVPITSFDHAGSLLVLGCQNAQLLYVDMGKFPLRMKDNDLLVSSLYTEPTGQSITAVSVYQARSSSQESWTEIAIGTSGGIVRVIVQHPETVGHGPQLFQTYSVHCHPITSVMLSEKHLVSGNGTSVSLAG* # ORIGINAL: g10471.t1 original gene structure, not modified by PASA NODE_446_length_23557_cov_43.2431 AUGUSTUS gene 17408 21331 . - . ID=g10471;Name=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS mRNA 17408 21331 . - . ID=g10471.t1;Parent=g10471;Name=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 21240 21331 . - . ID=g10471.t1.exon1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 21240 21331 . - 0 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 20878 20929 . - . ID=g10471.t1.exon2;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 20878 20929 . - 1 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 20535 20653 . - . ID=g10471.t1.exon3;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 20535 20653 . - 0 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 19812 20302 . - . ID=g10471.t1.exon4;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 19812 20302 . - 1 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 19557 19700 . - . ID=g10471.t1.exon5;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 19557 19700 . - 2 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 19264 19457 . - . ID=g10471.t1.exon6;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 19264 19457 . - 2 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 18964 19105 . - . ID=g10471.t1.exon7;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 18964 19105 . - 0 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 18725 18782 . - . ID=g10471.t1.exon8;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 18725 18782 . - 2 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 18480 18571 . - . ID=g10471.t1.exon9;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 18480 18571 . - 1 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 18202 18256 . - . ID=g10471.t1.exon10;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 18202 18256 . - 2 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 17942 18039 . - . ID=g10471.t1.exon11;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 17942 18039 . - 1 ID=cds.g10471.t1;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS exon 17408 17601 . - . ID=g10471.t1.exon12;Parent=g10471.t1 NODE_446_length_23557_cov_43.2431 AUGUSTUS CDS 17408 17601 . - 2 ID=cds.g10471.t1;Parent=g10471.t1 #PROT g10471.t1 g10471 MDGDAGVTVHALFSKDEAPRRLLYRPPYGDDECGQFSGYCGFPLPQTVVVFIAGAMEDVAASARFVVTLSIGSEIAPRELGSFGKDVRCLCTDIHWSVEELRVAKEVESRDGLAKLVVRAEGYSPDASARHLAQLGLMSPVSAVSGYLSQQLTQSPTSVSLAMTAALSRGAKADSGSPTCPPDSGHSSPADQHLGARAHTHANALSPLAGLAKKASSKQSAKRSGDASVARPQKRRSIAETVEATVAIADGAVPNDGAAIPTARWGHVFVPLGRGRYIMHGGQGPKQEMARDDLWMYSAESGEWRAVVAGGTPPASRMGHTAVYVQDRASVYVFGGSKNLRWFNDMYALAIEDDAAAAEWTLVKSLGKSPTSAYHSCTVFRDELYVFGGVHGHQSARIPDTCSNTVHVFTPATSTWYEPLVTGTKPCPRSGHSATLVGEQLIIFGGWDSPTCFGDLFILDLVMMEFTQPQTSGSPPSPRSWHSAVALPDRKIVVSGGFDGENSLDDAHILDLDTMAWSALSPSSEIFRRPRAGHVTCLATSEVASGAPAVVVSGGGDNNDFFYPGAQTVPVSLVLS* # ORIGINAL: g2755.t1 original gene structure, not modified by PASA NODE_17546_length_225_cov_32.44_potentialcontaminant AUGUSTUS gene 2 225 . + . ID=g2755;Name=g2755.t1 NODE_17546_length_225_cov_32.44_potentialcontaminant AUGUSTUS mRNA 2 225 . + . ID=g2755.t1;Parent=g2755;Name=g2755.t1 NODE_17546_length_225_cov_32.44_potentialcontaminant AUGUSTUS exon 2 225 . + . ID=g2755.t1.exon1;Parent=g2755.t1 NODE_17546_length_225_cov_32.44_potentialcontaminant AUGUSTUS CDS 2 225 . + 2 ID=cds.g2755.t1;Parent=g2755.t1 #PROT g2755.t1 g2755 SEARVARRIRVEMRTLEELIAAKDKIIKNFEETLKTIVAAKDETLKKSDETLKTIVAAKDETLKTTLAAKDETL # ORIGINAL: g497.t1 original gene structure, not modified by PASA NODE_794_length_17615_cov_52.1326 AUGUSTUS gene 156 363 . - . ID=g497;Name=g497.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS mRNA 156 363 . - . ID=g497.t1;Parent=g497;Name=g497.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 156 363 . - . ID=g497.t1.exon1;Parent=g497.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 156 363 . - 0 ID=cds.g497.t1;Parent=g497.t1 #PROT g497.t1 g497 MVINHQNKRARGIATSDLSVIPRESLEKANVRLVVVGCAPFKFIKKFKQDLNYSNEIYCDPSLAMYNAL # ORIGINAL: g499.t1 original gene structure, not modified by PASA NODE_794_length_17615_cov_52.1326 AUGUSTUS gene 8321 14587 . - . ID=g499;Name=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS mRNA 8321 14587 . - . ID=g499.t1;Parent=g499;Name=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 13958 14587 . - . ID=g499.t1.exon1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 13958 14587 . - 0 ID=cds.g499.t1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 12986 13831 . - . ID=g499.t1.exon2;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 12986 13831 . - 0 ID=cds.g499.t1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 9477 12824 . - . ID=g499.t1.exon3;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 9477 12824 . - 0 ID=cds.g499.t1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 9090 9274 . - . ID=g499.t1.exon4;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 9090 9274 . - 0 ID=cds.g499.t1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 8717 8909 . - . ID=g499.t1.exon5;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 8717 8909 . - 1 ID=cds.g499.t1;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 8321 8563 . - . ID=g499.t1.exon6;Parent=g499.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 8321 8563 . - 0 ID=cds.g499.t1;Parent=g499.t1 #PROT g499.t1 g499 MSVSVKVAVRVRPFNSREVNLKSRCCIRMNGKTTTIFRPSEGSSERNAPMASASDSKSFTFDHSYWSLERSDASNFASQETIYDEIGREMIAHSFEGYNVCVFAYGQTGSGKSYTMMGMGDERGLIPRCCEDLFGRIADMTSREAELSFRVEVSYMEIYCERVRDLLNPRNKGNLRVREHPALGPYVEDLSKLAVSSFDDIRNIMDEGNKARTVAATAMNEVSSRSHAVFTVVLTAVRADKETGLKGEKVSRINLVDLAGSERADSTGATGDRLKEGSAINQSLTSLGKVIAALADQGGLPASPSPASPDILGKKRRKSTTPGEKGAAGARKGAAASGAAASYIPYRDSVLTWLLKENLGGNSKTAMIAAISPSDANYEETLSTLRYADRAKRIVCRAVVNEDPTAQLIRQLREELAVLRAKIVDNEGAPRPPPRVETVSPAVSGSAAGDALEVAAAASAVTQTQEELLRVREELARSEKIMAELNETWEEKLRRTADITHAREKALEELGLALGEDGGGSIVGVFSPKRLPHLVNLNEDPLMNECLLYHVRYPGITRIGSGGASSPQDIMLNGEAILPAHCVIECEDDGAVWLRCSEGANVRVNGTRVSHGSPVRLASGARVLIGDRHEFRFTNPIEALKRMGEKSRSGLSAAASETLQQHVGESLGNGVGSGDSVHLHALAVDERPPLSDTTIKGNAPVENATEDVVRPMVTGDDGAAVTGLPERLDVHARAEAEERARQRENELVEERARQRENELVEERARQRENELAEERARQRENELAEERARQRENELAEELARQRENELARLALERWRMYREGSLKDQILGASAMVKEANAISAELRRGVSFQFVVEFDSPYAHRLFDRARVSHRTLTRHSNNSDDDDHAAAVARAIHATSPSGAHILERSRYDPDASVPFCGPHPRVKTLAVEVCDACTAHVTTWSIAELRARLPEMRELLSSVGEEASIRRRASMSRVADPFLDAPPQDKYLGRAYVSLLAPASTRAADVTASIVDPQGRVRGTLRVNVCAIPDDAEYTTPPPFAERLVIDLGEDESASPFRFAIGVLEATGLGDRLVQDAPPTPFASVRVCGRFARLGVNTVSHTDPTLRAQAHYPEHVTGSTARFDHWAEVTIAGAEDVASSLADDALAFDVFVKPSRPHLDELLAGRHVPAIVANADKAMYDAERLSGAQAAFSDIMRSLQYEKSRARSFVAAAQMTPRPRVFSESEGIAVSVLPRRPMSPSVAPRTSASPSASAAPQSHHSPHGKSASSQVASVGSGSGTGTGTGTGSGGAADLHYDVLGWYEISEPCETGDHVPVPVDFNEHPDGVFLLRQALQRRIAVAFAYEPAGKFCIRTVTAMSAGHVRTKKDAAPDSVPFFLPLRIVSQPVHAGGRTNGTCIVRAEGAWDSSLHDCALLNRATNARDKVYLTLHVDVAIDGCQRPVTLSRDICVRVHPRDSRPQPARPGILRNLWSSSAASPSPSTLTAALVARGATSGVRTSSVFEVRLRRESVLRRASVILDTSHIYVRGEENLGSWKPLGPSILLPEAREMQDRLWFIAHAEYARQLLQCGQIAGVDIECAIPGEINKRWTSDAILSVWRRPLLWERASNFDISAPRSVDGALLENAGATNDRAAIETAESDVGRVEEDDLQDAMDWMGTAREAKKGDSVTMRGYLNSLENAGDTWTRRWFEVRRPFLHVFESKADPIERTIFNLGTVKIEYSHRQAAMLQRPYTFSICSRSRGFLLQASSEKEVGEWLYSLDPLVMGAAMSRSGLLNPSHSTSPPPSQPREQRDRLASQAGRGSPSPSKH* # ORIGINAL: g498.t1 original gene structure, not modified by PASA NODE_794_length_17615_cov_52.1326 AUGUSTUS gene 4669 7040 . + . ID=g498;Name=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS mRNA 4669 7040 . + . ID=g498.t1;Parent=g498;Name=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 4669 4828 . + . ID=g498.t1.exon1;Parent=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 4669 4828 . + 0 ID=cds.g498.t1;Parent=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 5113 5228 . + . ID=g498.t1.exon2;Parent=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 5113 5228 . + 2 ID=cds.g498.t1;Parent=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS exon 5697 7040 . + . ID=g498.t1.exon3;Parent=g498.t1 NODE_794_length_17615_cov_52.1326 AUGUSTUS CDS 5697 7040 . + 0 ID=cds.g498.t1;Parent=g498.t1 #PROT g498.t1 g498 MSALDVSSRIPRYLELIAKDGRTVVDIIPLENEDPFTLETFDSLIELHAEKGRDFVLARVQTQDPENEESVFYSHYAAHHLNKIIFYRRGRNLVRVEALNPLTNTPICGDVEYYIVDLTSPSTELGACRSVPMRRRAAAKLSSKAFQGNRSALQICATPATAVRAASPQSRRGMERGLSVESLPSSRDAASQLADGPTPTPPPPPSPPERPTDQPPPPPPPQQQQERPQRARRMSAAAREGHRFRRQLSMPTVSRQYNTSTTCLVLHDRVRAVKHADYASIGNSVTGSQAVRNNAGSAAPPLYEHREPSSAAEEGLVGVSIPSSVEPTPAAKTTPLRQKFVGTVPALLFGTDVDFLKKPVFRARLAECALDPSDAVLFEIPGAPHAHVGVGLPPRRPEGMNGLPGGFVPHPILPDYTYQYVPGPPVGCFGNGSCAMWYIWRFVAIYILFSFLIIRYVIPHDYMTVAIIVFTTAPFAVYSVTQCCCCWSFCFTADGCHLPQPGCLRRTWRRLRACMCKDRAIHEPIPSAGSSSTVSDDIV* # PASA_UPDATE: g500.t1, single gene model update, valid-1, status:[pasa:asmbl_9409,status:12], valid-1 NODE_794_length_17615_cov_52.1326 . gene 15209 17486 . - . ID=g500;Name=g500.t1 NODE_794_length_17615_cov_52.1326 . mRNA 15209 17486 . - . ID=g500.t1;Parent=g500;Name=g500.t1 NODE_794_length_17615_cov_52.1326 . five_prime_UTR 17484 17486 . - . ID=g500.t1.utr5p1;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . exon 17367 17486 . - . ID=g500.t1.exon1;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . CDS 17367 17483 . - 0 ID=cds.g500.t1;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . exon 16612 16758 . - . ID=g500.t1.exon2;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . CDS 16612 16758 . - 0 ID=cds.g500.t1;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . exon 15209 16491 . - . ID=g500.t1.exon3;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . CDS 15337 16491 . - 0 ID=cds.g500.t1;Parent=g500.t1 NODE_794_length_17615_cov_52.1326 . three_prime_UTR 15209 15336 . - . ID=g500.t1.utr3p1;Parent=g500.t1 #PROT g500.t1 g500 MGEAAARTVLHTDPSANPVVIGVQGVKTVYVDLVESVKMTQEVPIAIQNCDYERAMHLRGNYFKEDFEILKRVNCIECTDPLSLNGKDPLNFVVLHCGAPAAGMNAAARAAVRIAIYSGHTVYGAKDGFEGLASGNIVKMTWASVNTWMDKGGAELGTNRTQPSAAGLAAIAASLRLHKIHGIIVIGGFEGFTGLLELVRSREKYPEFCVPMTLLPATISNNMPGTEFSLGSDTALNAIVRCIDVLKQSASSSRKRVFVVETHGGYCGYLATLGAVATGAEICYTAEEGINLHRLQEDISFLMSRFKEGATCGMVLRNEKAEDTYTTQVIHDIFAAEGRDYFTTRVNVLGHLQQGLTPSPLDRIRGVKLATLCVSRLCQQAHASALLHNGEVCTKEKDSAVVVGLHGTDVAYKALEDLVADTDFKHRRPKEQWWGGMAKLMKVLAKHNFKAAPAAHSAHRPSQEAATEKNTA* # ORIGINAL: g2509.t1 original gene structure, not modified by PASA NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS gene 461 2397 . + . ID=g2509;Name=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS mRNA 461 2397 . + . ID=g2509.t1;Parent=g2509;Name=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 461 532 . + . ID=g2509.t1.exon1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 461 532 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 837 908 . + . ID=g2509.t1.exon2;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 837 908 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 1167 1238 . + . ID=g2509.t1.exon3;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 1167 1238 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 1332 1403 . + . ID=g2509.t1.exon4;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 1332 1403 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 1497 1568 . + . ID=g2509.t1.exon5;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 1497 1568 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 1662 1733 . + . ID=g2509.t1.exon6;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 1662 1733 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 1992 2063 . + . ID=g2509.t1.exon7;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 1992 2063 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 2322 2397 . + . ID=g2509.t1.exon8;Parent=g2509.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 2322 2397 . + 1 ID=cds.g2509.t1;Parent=g2509.t1 #PROT g2509.t1 g2509 NWSGQQLTSIASGLFDGLPGLTELQLQSNQIATLPSGIFDKNTALNYLQLQSNQIATLPSGIFDKLTALTDLDLQSNRIATLPSGIFDKLTALTQLDLQSNRIATLPSGIFDKLTALTQLDLQSNRIATLPSGIFDKLTALTQLYLNANQIATLPSGIFDKNTALNWLLLDSNRIATLPSGIFDKLTALERL* # ORIGINAL: g2510.t1 original gene structure, not modified by PASA NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS gene 4618 5991 . + . ID=g2510;Name=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS mRNA 4618 5991 . + . ID=g2510.t1;Parent=g2510;Name=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 4618 4788 . + . ID=g2510.t1.exon1;Parent=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 4618 4788 . + 0 ID=cds.g2510.t1;Parent=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 4891 5572 . + . ID=g2510.t1.exon2;Parent=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 4891 5572 . + 0 ID=cds.g2510.t1;Parent=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS exon 5687 5991 . + . ID=g2510.t1.exon3;Parent=g2510.t1 NODE_2480_length_6111_cov_23.6039_potentialcontaminant AUGUSTUS CDS 5687 5991 . + 2 ID=cds.g2510.t1;Parent=g2510.t1 #PROT g2510.t1 g2510 MIVPPSVPKVNATAEVSDYRVGIRLRWSHDDVGPRAWSSPGWRYEISRAGCFPKVYQVGDVLTFLDLDVVINQGYTYFVKAYNSRNVSSTKAGQFAIESLEKAEPPSPPYNVSSTPTLNPDNQKSMIKFTWKEDTSSGPIIKTLIFRDGRLVLEGYTATEYKDRDIVFGKTYVYEIISVNQYGNSTATRFSETASIGPSDSGATAGASSSSNVAGPVAGGVVGAIVGAAGIVFAILFFRKRTSRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQVGNHGQGLVRGQSAPVQYVRAFRQVGAFH* # ORIGINAL: g2624.t1 original gene structure, not modified by PASA NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS gene 2806 4660 . + . ID=g2624;Name=g2624.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS mRNA 2806 4660 . + . ID=g2624.t1;Parent=g2624;Name=g2624.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS exon 2806 3456 . + . ID=g2624.t1.exon1;Parent=g2624.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS CDS 2806 3456 . + 0 ID=cds.g2624.t1;Parent=g2624.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS exon 3608 4660 . + . ID=g2624.t1.exon2;Parent=g2624.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS CDS 3608 4660 . + 0 ID=cds.g2624.t1;Parent=g2624.t1 #PROT g2624.t1 g2624 MTANASFSSLSPEIVVEHLVPYLSNGEIAVLAKVNRTLRAHLWRVRLLHLWPRCFDTYLVDPAFRAEFASFLPVDRLYLKTPVQRGVLVPVADLTPFAGVHTADLHSGAVTMMDLSPLQGVHTVCICVNPLVTPNLDLTPLARAHSLLVFATSKGVNFHPVANVPCLTLSSDDVEFTDLSPLRDRHPVSVTIDNRSGRLTDISPLACARKVSIPVCKRIVDFSPLSRVHTVMLGQHDAIALPDALGSVHTLILKSWRKLKDVSAVRCIHALILTSTYLDDVSPLRNVHTLHCGVRDVDLSPLQSVHSLTLSVLHGSRARGLSALGRVHTLNISGWVANQSDFLALGGVRHLTIESEALEDASRLGGVHTLNLYGNERLRDVSALGGIYWLKIMSRGVWDVSALGRVHTLDLSDCVLISDVSALGGVHTLNLNGCHLVQSVSSLGGVFDLNLFGTSVSDVSALGGVRILNLRNCPVEEVSALGSVHELNLTRCKKVKDCSALGRVHKLNLSYTSVEDVSALGGVHTLDLSYCPVVDVSALDRVCVLNVCATNVVDFSPLVHVRKLSHW* # ORIGINAL: g2625.t1 original gene structure, not modified by PASA NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS gene 8295 9521 . - . ID=g2625;Name=g2625.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS mRNA 8295 9521 . - . ID=g2625.t1;Parent=g2625;Name=g2625.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS exon 8295 9521 . - . ID=g2625.t1.exon1;Parent=g2625.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS CDS 8295 9521 . - 0 ID=cds.g2625.t1;Parent=g2625.t1 #PROT g2625.t1 g2625 MAEFIEEIEHKERRAALDSLDLMGDLMSDLEEIREWMKAHPYWGVPLVREVLERKLFHLVEVVTEITGIPHDLLTMDSRLLVPVILENCRDNPSEIAVRLMQDAFSKIKNPYPDILEFWTKCGVDIPDHLVGNTDRNRLPTSLIEFLHWWLSKSSDRPKMDLQRLFEQGGAALWKGAKEGDPLRFFSMNKYVAFWLSCPNWCFASGDVYELFKVLQQSDGLLARVARLQDAHRATFASSLEKTSWQGNSSVFHYIARKRIATIMVQFLQIVQREVLFVKNDWGVTPLGIAVQLDEFYETPVLLEAIRPYVTLEEVEAARNAPKRWLTDLYIVAPPRAYGLGNIKAVSTSTYQIEYCCDDSLTDHGELDGVRTLSYLSRKTGLKRARARWMKIEINDNTKHIHVIRGNH* # ORIGINAL: g2623.t1 original gene structure, not modified by PASA NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS gene 228 782 . - . ID=g2623;Name=g2623.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS mRNA 228 782 . - . ID=g2623.t1;Parent=g2623;Name=g2623.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS exon 228 782 . - . ID=g2623.t1.exon1;Parent=g2623.t1 NODE_1313_length_12193_cov_22.2009_potentialcontaminant AUGUSTUS CDS 228 782 . - 0 ID=cds.g2623.t1;Parent=g2623.t1 #PROT g2623.t1 g2623 MADAIAYLEPQEHETISKEIASDDDGGTLDETRMPASFMQMIGKGKVINKKTNSTPVVSATAPDEEENDVFVDATADIRKGLSRKHDKKGKGKGKSGRKRHHRLLRDNIQGITKPAIRRLARRGGVKRISGIMYEDVRGVLKTFLEDVLRNAVTVTEHARRKTVTAGDIHYGLRRVGRVMYGCT* # ORIGINAL: g13997.t1 original gene structure, not modified by PASA NODE_2488_length_6076_cov_39.5174 AUGUSTUS gene 248 6076 . + . ID=g13997;Name=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS mRNA 248 6076 . + . ID=g13997.t1;Parent=g13997;Name=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 248 313 . + . ID=g13997.t1.exon1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 248 313 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 470 579 . + . ID=g13997.t1.exon2;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 470 579 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 739 955 . + . ID=g13997.t1.exon3;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 739 955 . + 1 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 1204 1335 . + . ID=g13997.t1.exon4;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 1204 1335 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 1640 1819 . + . ID=g13997.t1.exon5;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 1640 1819 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 2041 2166 . + . ID=g13997.t1.exon6;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 2041 2166 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 2437 2521 . + . ID=g13997.t1.exon7;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 2437 2521 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 2666 2836 . + . ID=g13997.t1.exon8;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 2666 2836 . + 2 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 3054 3196 . + . ID=g13997.t1.exon9;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 3054 3196 . + 2 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 3466 3555 . + . ID=g13997.t1.exon10;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 3466 3555 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 3878 4048 . + . ID=g13997.t1.exon11;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 3878 4048 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 4227 4334 . + . ID=g13997.t1.exon12;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 4227 4334 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 4548 4648 . + . ID=g13997.t1.exon13;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 4548 4648 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 4872 4947 . + . ID=g13997.t1.exon14;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 4872 4947 . + 1 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 5093 5215 . + . ID=g13997.t1.exon15;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 5093 5215 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 5573 5716 . + . ID=g13997.t1.exon16;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 5573 5716 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS exon 5936 6076 . + . ID=g13997.t1.exon17;Parent=g13997.t1 NODE_2488_length_6076_cov_39.5174 AUGUSTUS CDS 5936 6076 . + 0 ID=cds.g13997.t1;Parent=g13997.t1 #PROT g13997.t1 g13997 MTTPLSAAKQTARVKIKPFHQPISMDANYVNDTWRLLRLAIVEIQRKNSGKLAFEELYRNAYNLVLHQYGERLYTGLKEAVSVHLRDVGKQIEDAIDRNFLQTLIAAWKDHEMAMSSIRDILMYMDRVHVKRARVDPTYDLGLKYFRDEVARRPRVKEHLQATLLDMIRREREGEVVDRSLLKSACTMLIDLGVSSRSVYEDDFEKDFLTTTSDFYRAESQRFISENNASDYMRKAETRMREEVERVLHYLDAGTEVKLRAVVDRELISNHMKTIIEHTNFESCMRFPFVDSIGVSPTTLESNSADLGRMYSLFGRVDGHQTMRDHIVAHVKETGKGIVDAINHASAAPVLGEEGQPSEGPGSSAAASNSVSGTDAIRYVQQLLDLRDKYDNLLKASFVADKKFRDAINSAFEHFINASPKSPEYISLFIDDKLKKGLKGVSEEEIESVLDRTMMLFRYLSEKDIFERYYKQHLAKRLLLAKSVSDDAERSLIGKLKAECGYQFTSKLEGMFKDISVSSDLMVTFKTFLDSSQSDLRSVDLNVRVLTTGYWPTNANSSRCNLPPELSHACDVFQNFYYSKHTGRRLTWQSNLGSGDVKAVFGGKSHELTVSTHQMVVLLLFNNHQDGHQLTFQDIQQETDIPEADLRRTLQSLALGKYRILTKEPKTREVGALHTFGVNEKFTCKLFRIKIQAIASKETDAECAETRSKVDDDRKHEYPPMMPPPYPP # ORIGINAL: g9332.t1 original gene structure, not modified by PASA NODE_2415_length_6371_cov_38.6178 AUGUSTUS gene 3929 6176 . + . ID=g9332;Name=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS mRNA 3929 6176 . + . ID=g9332.t1;Parent=g9332;Name=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS exon 3929 3972 . + . ID=g9332.t1.exon1;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS CDS 3929 3972 . + 0 ID=cds.g9332.t1;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS exon 4100 4889 . + . ID=g9332.t1.exon2;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS CDS 4100 4889 . + 1 ID=cds.g9332.t1;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS exon 5052 5156 . + . ID=g9332.t1.exon3;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS CDS 5052 5156 . + 0 ID=cds.g9332.t1;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS exon 5474 5652 . + . ID=g9332.t1.exon4;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS CDS 5474 5652 . + 0 ID=cds.g9332.t1;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS exon 6032 6176 . + . ID=g9332.t1.exon5;Parent=g9332.t1 NODE_2415_length_6371_cov_38.6178 AUGUSTUS CDS 6032 6176 . + 1 ID=cds.g9332.t1;Parent=g9332.t1 #PROT g9332.t1 g9332 MLSRVARLSLGAAAREAGASQTRASAAAVAGGRPAVYIRMALPVTAVGASSALRRYSTAPVATETASAVVASSAQTATSDTAASAAIAITDPAWWAAAVHEFGSHAVRGEVAAAGRGNYTPVGAIENALEFVSATSGLPWWMSIVATTAVVKLCLLPLVVRSTRNGVLLNNVAPAMEKHTTKMKAYNLAGERDLAILEAQQLREVMNKGGANPFMSFALPLIQGPIFISFFLALRSMATVPLETLKDGGYLWFKDLTVADPYYILPAISSGFTFLLIQKTLKQMPPTSTKPLMSAFMRVISIATFPIAATLPTANLVYWVIANGFTVSQMTLLTSSFGKRYFNIPERVVHAKPSGAPSSSTGIKGFIEDIKMGYNAAAKMIDDRTQPAPKGKDAAVRKEADSFEKQLEALRMSKIKKSTQ* # PASA_UPDATE: g9331.t1, single gene model update, valid-1, status:[pasa:asmbl_4262,status:12], valid-1 NODE_2415_length_6371_cov_38.6178 . gene 87 2698 . - . ID=g9331;Name=g9331.t1 NODE_2415_length_6371_cov_38.6178 . mRNA 87 2698 . - . ID=g9331.t1;Parent=g9331;Name=g9331.t1 NODE_2415_length_6371_cov_38.6178 . exon 2623 2698 . - . ID=g9331.t1.exon1;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . CDS 2623 2698 . - 0 ID=cds.g9331.t1;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . exon 2336 2398 . - . ID=g9331.t1.exon2;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . CDS 2336 2398 . - 2 ID=cds.g9331.t1;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . exon 2100 2188 . - . ID=g9331.t1.exon3;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . CDS 2100 2188 . - 2 ID=cds.g9331.t1;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . exon 87 1882 . - . ID=g9331.t1.exon4;Parent=g9331.t1 NODE_2415_length_6371_cov_38.6178 . CDS 87 1882 . - 0 ID=cds.g9331.t1;Parent=g9331.t1;3_prime_partial=true #PROT g9331.t1 g9331 MVFDPNLAASSPSRKNTWANELGLSDVQHDASDESDEGDAGNGVKGDHVSRAEHNGVLQLVQKETKLREEALLSVKAWEEKYAKLERQITTEKDRNTQHMKILRATHTQQVDHFKRELDEVKHLAEEYEEKLSVLEAHASGDKSAPIPEVTGVRRLTDLIEQLQSENRVLASRADEMGAAAEEMTLLKSQVTSLEREKKELQQKQSLLLSAKQQAPAPTAAVQSSEQSKEDAAAIAALRRENDTLRRKVEDLEQKEIVNARNKGIERDAEAAQAKLKTDADRARADADKVKAEADRLRGELEDAQRVSKKMTREREDLQSKVTQLETTNAALSAKGASAAAETNSAVRVAQDEAKRAQAKADENLKNLRAIENERDELLSKLKAAAADKDSLQAKIASCSKERDEVAAQLKAASADGDTTKGRLIALTGEKEAVAKELAAAKTRIAELEGEVSRMTKEVADAKAAVRAAQEAADKSIADGKVAVDRAIAEAKAALELSSRSIKDKIAWVVSMLGKMKGEYHLIRSAHDALKTEAGTMNRTVRDGITVATKSVLRAIAEQDKMNKELVHKYRKEMALRKKYHNELVELKGNIRVYCRVRPSQENEGPTTVSFDADDDGVVRVLNKGVVKPIEVDKVFTPTSTQAQVFEEVRALVISCIDGYNVCIFAYGQTGSGK # PASA_UPDATE: g3989.t1, single gene model update, valid-1, status:[pasa:asmbl_2245,status:12], valid-1 NODE_1654_length_9961_cov_42.2032 . gene 1981 5090 . - . ID=g3989;Name=g3989.t1 NODE_1654_length_9961_cov_42.2032 . mRNA 1981 5090 . - . ID=g3989.t1;Parent=g3989;Name=g3989.t1 NODE_1654_length_9961_cov_42.2032 . five_prime_UTR 5056 5090 . - . ID=g3989.t1.utr5p1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 4975 5090 . - . ID=g3989.t1.exon1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 4975 5055 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 4553 4801 . - . ID=g3989.t1.exon2;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 4553 4801 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 4292 4351 . - . ID=g3989.t1.exon3;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 4292 4351 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 3927 4061 . - . ID=g3989.t1.exon4;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 3927 4061 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 3303 3586 . - . ID=g3989.t1.exon5;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 3303 3586 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 2953 3124 . - . ID=g3989.t1.exon6;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 2953 3124 . - 1 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 2666 2799 . - . ID=g3989.t1.exon7;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 2666 2799 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 2319 2412 . - . ID=g3989.t1.exon8;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 2319 2412 . - 1 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . exon 1981 2114 . - . ID=g3989.t1.exon9;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . CDS 1995 2114 . - 0 ID=cds.g3989.t1;Parent=g3989.t1 NODE_1654_length_9961_cov_42.2032 . three_prime_UTR 1981 1994 . - . ID=g3989.t1.utr3p1;Parent=g3989.t1 #PROT g3989.t1 g3989 MAVPTVIGSRALARALFSVRQINTNAQVLPNTRQWMVFSLHARAIPRRTLATISPPTPFPTIPPGVISGEHAESALARKAKSAKQSAVANRIGRVHLRKPNTTARQVVPERAKERTRRNNNNDEQVMQSERLACFAFTTAERYNLSKLLPVLNTRYAITPFHPDDGSNAAVPTRKIIHAKLSQSLLQTPGDATIDGAATDNTAHLSHSSLYASKSVGEIFVFDQGTVVCWNVPRDEIAELRLLLKCAEEEPYDASLPERHAEDMHYVIARQKSEVSGSRLLFDEAADETTHTMEKFTFSNGLALSVKLSVWETMLDDYIAGMERFPRMLKEGRTLRLSRRDVLRKTGELLYLRYSINLASDVLSPPDFYWNRPRLEDLYSRITRSLDVNLRTNVINSKLNHCQELAGLLRTHLSESHGTNLEWAIIALISVEVVFEMLHYMR* # PASA_UPDATE: g3990.t1, single gene model update, valid-1, status:[pasa:asmbl_2247,status:12], valid-1 NODE_1654_length_9961_cov_42.2032 . gene 5447 6090 . + . ID=g3990;Name=g3990.t1 NODE_1654_length_9961_cov_42.2032 . mRNA 5447 6090 . + . ID=g3990.t1;Parent=g3990;Name=g3990.t1 NODE_1654_length_9961_cov_42.2032 . five_prime_UTR 5447 5450 . + . ID=g3990.t1.utr5p1;Parent=g3990.t1 NODE_1654_length_9961_cov_42.2032 . exon 5447 5593 . + . ID=g3990.t1.exon1;Parent=g3990.t1 NODE_1654_length_9961_cov_42.2032 . CDS 5451 5593 . + 0 ID=cds.g3990.t1;Parent=g3990.t1 NODE_1654_length_9961_cov_42.2032 . exon 5755 6090 . + . ID=g3990.t1.exon2;Parent=g3990.t1 NODE_1654_length_9961_cov_42.2032 . CDS 5755 5932 . + 1 ID=cds.g3990.t1;Parent=g3990.t1 NODE_1654_length_9961_cov_42.2032 . three_prime_UTR 5933 6090 . + . ID=g3990.t1.utr3p1;Parent=g3990.t1 #PROT g3990.t1 g3990 MSVNIHSLFPFYLSILVPSIMEVLSERSLTAAQAEQRLSRFLGKEATSHNVPADIVFQLQELDRVLQLVAARESAAVEAQPPSAAQPVVVMAENAKNKSKKSKRKE* # PASA_UPDATE: g3991.t1, single gene model update, valid-1, status:[pasa:asmbl_2246,status:3], valid-1 NODE_1654_length_9961_cov_42.2032 . gene 6324 8643 . - . ID=g3991;Name=g3991.t1 NODE_1654_length_9961_cov_42.2032 . mRNA 6324 8643 . - . ID=g3991.t1;Parent=g3991;Name=g3991.t1 NODE_1654_length_9961_cov_42.2032 . five_prime_UTR 8601 8643 . - . ID=g3991.t1.utr5p1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 8586 8643 . - . ID=g3991.t1.exon1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 8586 8600 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 8313 8471 . - . ID=g3991.t1.exon2;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 8313 8471 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 8106 8169 . - . ID=g3991.t1.exon3;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 8106 8169 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 7710 7861 . - . ID=g3991.t1.exon4;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 7710 7861 . - 2 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 7000 7599 . - . ID=g3991.t1.exon5;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 7000 7599 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 6656 6808 . - . ID=g3991.t1.exon6;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 6656 6808 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . exon 6324 6519 . - . ID=g3991.t1.exon7;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . CDS 6364 6519 . - 0 ID=cds.g3991.t1;Parent=g3991.t1 NODE_1654_length_9961_cov_42.2032 . three_prime_UTR 6324 6363 . - . ID=g3991.t1.utr3p1;Parent=g3991.t1 #PROT g3991.t1 g3991 MAPIGKIFTYPNNPRVYKALIAAQYAGVEVQVVSSGSDFTYGVTNKSEAFLKKFPVGKVPAFEGADGTHLFESNAIAYYIASQKKEAQLLGKNDVEAAQVQQYVNFADHEIYPASCTWVYPILGIINFNKQASEKAKQDIEHALAALNEILRTKTFLVGERVSLADIVVASTLVPLYENVLDVATRKAFGNVNRWFVTLINQKEFKTVLGDFKLVETAKQPALPAKEDKKKEEKKEKKEEPKKEAPKKEEPKKKEAAPEEDDLLDEEREAPAKDPLGALPKSSFDLDGFKRSYSNDDTITVAIPHFWKNLDKEGYSIWRCDYKYPEELQKVFMTCNLIAGFFQRVEKLRKYAFASMCVFGEDNKNQISGIWVTKGSELVFPLLDDWNVDAPSYNWKKLDINAAETMEMVNEYFAWEGKEFTERKFNQGKIFK* # ORIGINAL: g3615.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 20669 22300 . - . ID=g3615;Name=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 20669 22300 . - . ID=g3615.t1;Parent=g3615;Name=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 22201 22300 . - . ID=g3615.t1.exon1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 22201 22300 . - 0 ID=cds.g3615.t1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 21943 22042 . - . ID=g3615.t1.exon2;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 21943 22042 . - 2 ID=cds.g3615.t1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 21678 21756 . - . ID=g3615.t1.exon3;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 21678 21756 . - 1 ID=cds.g3615.t1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 21419 21472 . - . ID=g3615.t1.exon4;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 21419 21472 . - 0 ID=cds.g3615.t1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 20999 21142 . - . ID=g3615.t1.exon5;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 20999 21142 . - 0 ID=cds.g3615.t1;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 20669 20830 . - . ID=g3615.t1.exon6;Parent=g3615.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 20669 20830 . - 0 ID=cds.g3615.t1;Parent=g3615.t1 #PROT g3615.t1 g3615 MDASLQQAHLLSVELRHRIEALETGRVSGYEVEAGITNSLEKLANDIRVSEGYVFREPASRRHVAKTRISQLQQDLQGLQTAFSHYNNRKNAKESEAKEREELLHRRFKPNEDDDTTIMIDAAIKENSQLRRADAGMDAILGSGSSILESLHRQRSTLKGARRRLLDIANTLGLSNTVMRFIERRGAQDKWILIGGMVITCVVMWATVHYFT* # ORIGINAL: g3617.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 24684 28408 . - . ID=g3617;Name=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 24684 28408 . - . ID=g3617.t1;Parent=g3617;Name=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 27003 28408 . - . ID=g3617.t1.exon1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 27003 28408 . - 0 ID=cds.g3617.t1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 26787 26872 . - . ID=g3617.t1.exon2;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 26787 26872 . - 1 ID=cds.g3617.t1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 26163 26248 . - . ID=g3617.t1.exon3;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 26163 26248 . - 2 ID=cds.g3617.t1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 25785 25931 . - . ID=g3617.t1.exon4;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 25785 25931 . - 0 ID=cds.g3617.t1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 25600 25675 . - . ID=g3617.t1.exon5;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 25600 25675 . - 0 ID=cds.g3617.t1;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 24684 25081 . - . ID=g3617.t1.exon6;Parent=g3617.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 24684 25081 . - 2 ID=cds.g3617.t1;Parent=g3617.t1 #PROT g3617.t1 g3617 MKGSGAQSKAPPRRKRKARDRSPSPPTSLPSSTGLDPDDPIDADTDDDDFAPRGDQVRRPVQAAVAVSRTGIRTKRPSESSTHSSAADASRLSRTSSTASLFSTTKPFFVASNSRFAPELPSTTDARVQGTTTHVHTLATASGGGSDATGGVDAQSALWTDTASLAEEDLAVHKKKIDEVRRWLSHVFTAQDAGFRLPLPPPRILLLSGPPGCGKTAVLLSLAHSMDFDIVEWINPVRPSWTAPSEGWVPGRQQQSDYVPVMKEFRDFLQRCERYPTLALTAAMSTRPVHSAGATQRRKVVLVEDMPNIQSTPSQTRSFHDIVRSLAQCGRFPLVFIMSDSSDGDSRRLFPLDMPIARVSFNAVARTSLEKAMAGIASQKHAANPTSFMMPDKESLRRIAEAACGDIRAAVNALHFACVRRLDRRDESVAIPRASDLRPSKKAVASGAGGRGKGRAKAAGKKGAKADTGEKIGDADFASRDVSITLFHALGKILYAKRDVEGPTDTDSLPPSLSHCARHKLLMNPEDVIGRTAVSGETFTAFLQENYLDFLSDIDSSLLPCESFSEADVLSSAWKERDTLSTYASSIAARGLVFTGVHGQLQSRYLAAFWPYARDVRGPGFQELLEEEEAVVDEDTHADAPPDAPAGSTATTTTGTTGTTGGSTGTTACDVDDDDDDAFGGNDDMDDPALLAAALIADDELEAAAAAAESASNAPEGAGAKPYMADDDIEDC* # PASA_UPDATE: g3616.t1, single gene model update, valid-1, status:[pasa:asmbl_2681,status:3], valid-1 NODE_180_length_33287_cov_43.3139 . gene 23291 24371 . + . ID=g3616;Name=g3616.t1 NODE_180_length_33287_cov_43.3139 . mRNA 23291 24371 . + . ID=g3616.t1;Parent=g3616;Name=g3616.t1 NODE_180_length_33287_cov_43.3139 . five_prime_UTR 23291 23364 . + . ID=g3616.t1.utr5p1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . exon 23291 23442 . + . ID=g3616.t1.exon1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . CDS 23365 23442 . + 0 ID=cds.g3616.t1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . exon 23622 23705 . + . ID=g3616.t1.exon2;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . CDS 23622 23705 . + 0 ID=cds.g3616.t1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . exon 23849 23959 . + . ID=g3616.t1.exon3;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . CDS 23849 23959 . + 0 ID=cds.g3616.t1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . exon 24148 24371 . + . ID=g3616.t1.exon4;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . CDS 24148 24354 . + 0 ID=cds.g3616.t1;Parent=g3616.t1 NODE_180_length_33287_cov_43.3139 . three_prime_UTR 24355 24371 . + . ID=g3616.t1.utr3p1;Parent=g3616.t1 #PROT g3616.t1 g3616 MAAAAKFIASCLCQQTQVEMDTPPRWSVTCHCSQCRRALGGPATLVGYNPGDIKIIKGEYNLVSYATGKEERLSCRICSGKVFARLNHLNQWAVYLDTFLNPNHGPDGKLDPRFKPTAHIFYTSGIIDYKDGLPKFINLPKDFGGSGETVPEDYHSTRQ* # ORIGINAL: g3614.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 9983 20435 . + . ID=g3614;Name=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 9983 20435 . + . ID=g3614.t1;Parent=g3614;Name=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 9983 16459 . + . ID=g3614.t1.exon1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 9983 16459 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 16751 16889 . + . ID=g3614.t1.exon2;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 16751 16889 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 17075 17122 . + . ID=g3614.t1.exon3;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 17075 17122 . + 2 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 17483 17610 . + . ID=g3614.t1.exon4;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 17483 17610 . + 2 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 17902 17949 . + . ID=g3614.t1.exon5;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 17902 17949 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 18280 18339 . + . ID=g3614.t1.exon6;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 18280 18339 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 18615 18697 . + . ID=g3614.t1.exon7;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 18615 18697 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 19103 19181 . + . ID=g3614.t1.exon8;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 19103 19181 . + 1 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 19484 19639 . + . ID=g3614.t1.exon9;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 19484 19639 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 19782 20435 . + . ID=g3614.t1.exon10;Parent=g3614.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 19782 20435 . + 0 ID=cds.g3614.t1;Parent=g3614.t1 #PROT g3614.t1 g3614 MRSRQLATACLMVLCVSHLGSSAKGDAPASLAQTVVNQLKPINARTRASTGALPALSLVDDGDRIVEIMRQLTTASFAGSSIIWNATETRNAPDDLPRLVSVERQQARERVRQLAVMWNNERLSPPRKDSTDSVDGTDRTARDGGADGKQVIPFPILPTETLVGVLLRILIDYYNNRAPLDPAFDPPVHYAVTFPQPSIMTADGSYPVVNWNSPVEPRFVGSQGIAFGFGQSFSAEINGQTPFGARTVLTVPCGGVDPFNPTINLQGLGVVSLSDISVVRCDDGSPPPSFYLDDSVSPAGAMTRLFHVGNFANFRTSRVDVSGIRGGFILADGNAAVTLEDSSFVGIINPLGGGSVAAATQAASVTILRCNGANIYSALSGVVTYADGVARVVIYASTFSSVGCLTITQMPASCSGGAFAAHGAAVMDVSLSSVVDASARTFGGCVSSGNFASVTISDSHFTRCGAQGGMGGFGAAHSFTGQPGPPLLRVQRSQILYSSSVRGGSFVAFGGTLIIDATVVSNSYAVDAGGVVASLFGSSVTVSNSDVSDVSSGGSGAVFAAMHSSVVTCTNVRVFRTLAQVDGGVFSATEMATVHAFNTTMENVVANNMGGVASARDTARVELSDSRVLAASAFNGGAFFASSESVSGGAAAIEVTRTVISSVVARGNAGVAYVDGVASIAVTACHITFAQAFYAGGAFVAGRAGSLLVDNTTLFGASASGNGGFVVAIENASVSVVNSTIESVSAGGDGGCAWAAAFSNQAIAGSGYVTLTFTDTVIRDVRAQGGNGGFVHADGNVKVFLSQLSVTRTGAMFYGGVLNLINGASTTAIGIDAIAVDAEYGGFLAAFSTQASLSGISVRLARARTAGGVVFVRGNAVVEMHSLYSFSSSVNIVVSANMLCKQTGAFAHVESGGRFLLSNSRIEGADNADCGGLAYVFDFGSHMRMEGVWAYAAQARNLGAVAHVSMNAALEIVDSELIGNVYDTTYASGVYVTNFASLEMTNVTMSAFAYVGDERASSIRDGSAACVQADSMGTALIRKSTFANMHLGACIVSIFSNITVIDSEFRFASSIASVVGAVVVVSEFASVTMAGCTVSHVSATQSATGQSAAIYVSDRAAEFFALNCTFSDIKSLSGVVYAPVARYIRLENVLMTHVDGQGINGASVSVGAVSNLEIIDSNFSKVSTVGSGGVLFCDSVQGFVGFTTNITIARVVGHDIVAQGGGAALYIRGRFVLDSTSSVFDAIFAVTVSVLNSSFSAVSAGENGGAVYAMNLAALSLVGSIFSNCRGRNGGALYLQADLAKGATYAIRGCSFTQSKSAENGGAVAVNYDTALSQVWSGTVSIAECVFNGTLARHSGGAIHASGDNKYGDDKLYLTVSSTVFVETYASIQGGAVYIAIADNEVVIRNISCTKTAANSDGGFLHVESGNVLLSGSRISGSLSERGSGGVLSVSYLGGYQRVADCIVTDAQAVSGGVFATANVQNSASPLVSLLSVSSSAFSRVSAEDGGFMYAISAGTVSAFTDVTVTDALASKKGGCFFIPSASSVTVSAPSRFERVTSLSGGLAYLSEGGSLSLDGGIILKSTANTGGLVYATGRNSSFVLSHFDVTESASKSDGGLLYLDDNADARLTYGHVTTTAAEMSGGFAFLKSASCAVADAVFTGVSALRSGGFAAVTVSSRMSCSNVTIDAMRDVPGNQILDGLGDQEAYGHGGAFLVLGSSLTAQSLTIGGSGSIFGFGGALALLSSTAVLDSVSVRNSHAKQGGGVYIGINSVVTISNSAISTANASANGGCIYVGSRSVMRARNTTLSNCNAGTDATTYGAGGAIYYAVGAVFDATSLSSVRIWGSRAVLGPGIFTQTRASAGSGDTASSATEASALALAAKNNSQVTFADVRPWPDATASLEAVGGNASSPAAAFEYSPSHGLSVTVGDPFGILLWTVDVTGNRVSTPPSSTLAVSLALVRWVNASVGYVEVSQGLSGDVERSFVRSAQLSFDALRINAPPGGNYSIIFKPGNLLYSAESQLFSGSRMPVSVTGCADGFTLSTYNASSTSGSSASSGSTAAPEVLARCNPILTGDSSASASGANSNSLAIALGVGIPVAFVVLLGCFVIVRWQIALLRKKQSAEVQIKFIEKHVSQHKELDSLEVGRDCIELMQKLGEGEFGVVFQARMALPNSRPRMCAAKSMKEGATIEERIAFISEAEVMQGLLHSNVVSLCGVVTRDEPMLILLEFVPHGDLRSFVRGIPATSYGSDVTASMFRMFAVQISAGMAYLSSMKIVHRDLAARNVMVGQDAYGEYLVKVADFGMSRALVNSDYYRKKKAGKVPVKWLAPEAMTKMVFSSKSDVWAYSVTLWEMYSFGEVPYPGVANSEMLVHLNSGRRLSRPQHCPESMFALMNACFEKDPVTRPSFSDISAHLASAPDVNATTSSRQYATAEKGYANFPYGADQPTGTEMVQISVDSRDDDANGHVQHGRVKSILASASAGRHPGSPQQHNTGTGNYSDPSLGGMKANLSLSRLSEADGDSQSDGIACKTKAVAQSVTTGDGERYANFLPLEAVSAPPPSLGSAGLDDPYANWTQPGVAKVLAGSKRAHPGVGMVSVGVRGGRDVVMSVVDPHRVYETVV* # ORIGINAL: g3611.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 286 825 . + . ID=g3611;Name=g3611.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 286 825 . + . ID=g3611.t1;Parent=g3611;Name=g3611.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 286 399 . + . ID=g3611.t1.exon1;Parent=g3611.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 286 399 . + 0 ID=cds.g3611.t1;Parent=g3611.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 694 825 . + . ID=g3611.t1.exon2;Parent=g3611.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 694 825 . + 0 ID=cds.g3611.t1;Parent=g3611.t1 #PROT g3611.t1 g3611 GLTTAAAVAGLWAASRPIALGPRARLASNAMLGMVAVQVTLGISTLIFFVPTPIAALHQSGSLTLLSIALWFVHELKRIAK* # PASA_UPDATE: g3618.t1, single gene model update, valid-1, status:[pasa:asmbl_2680,status:12], valid-1 NODE_180_length_33287_cov_43.3139 . gene 29410 33284 . - . ID=g3618;Name=g3618.t1 NODE_180_length_33287_cov_43.3139 . mRNA 29410 33284 . - . ID=g3618.t1;Parent=g3618;Name=g3618.t1 NODE_180_length_33287_cov_43.3139 . five_prime_UTR 33219 33284 . - . ID=g3618.t1.utr5p1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . five_prime_UTR 32746 32854 . - . ID=g3618.t1.utr5p2;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . five_prime_UTR 32500 32569 . - . ID=g3618.t1.utr5p3;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 33219 33284 . - . ID=g3618.t1.exon1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 32746 32854 . - . ID=g3618.t1.exon2;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 32383 32569 . - . ID=g3618.t1.exon3;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 32383 32499 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 31964 32048 . - . ID=g3618.t1.exon4;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 31964 32048 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 31695 31771 . - . ID=g3618.t1.exon5;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 31695 31771 . - 2 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 31397 31531 . - . ID=g3618.t1.exon6;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 31397 31531 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 30958 31083 . - . ID=g3618.t1.exon7;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 30958 31083 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 30483 30631 . - . ID=g3618.t1.exon8;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 30483 30631 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 29995 30130 . - . ID=g3618.t1.exon9;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 29995 30130 . - 1 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . exon 29410 29797 . - . ID=g3618.t1.exon10;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . CDS 29744 29797 . - 0 ID=cds.g3618.t1;Parent=g3618.t1 NODE_180_length_33287_cov_43.3139 . three_prime_UTR 29410 29743 . - . ID=g3618.t1.utr3p1;Parent=g3618.t1 #PROT g3618.t1 g3618 MDHLGGGGTAARAISAEKLPERITALHANSDMGFSEEYESLLNDGFSTEAALAGANKNKNRYANVLPFDHTRVKLTPIPGVEGSDYINGNFVDGYNKRNAYIATQGPVPDTFDDFWRMMWEQRSSVIAMVTNEDEKGRIKCHRYWPEPGSATYGFLEVTLVNQETPEDFIIRTFSMKNLKNGETRTIHHLQFTGWPDHGVPSSTRTLLRFISKSREVQPKEAGPIVVHCSAGVGRTGTFIAADVLLQRMQTENLVDVFNFVNQLRRQRMYMVQTEDQYIFVYSTLADALHDD* # ORIGINAL: g3612.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 1707 3368 . + . ID=g3612;Name=g3612.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 1707 3368 . + . ID=g3612.t1;Parent=g3612;Name=g3612.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 1707 3368 . + . ID=g3612.t1.exon1;Parent=g3612.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 1707 3368 . + 0 ID=cds.g3612.t1;Parent=g3612.t1 #PROT g3612.t1 g3612 MTLLYCIVQMRRPELWESPGAARGLLGEHVRVENLEPLSQQNGVSARSGGAESSNAMNAVAGGPAVLPDDQSVLLQSVFEMGSNDNVRPLVRLSVCEVDMLREAHRVMWSWMQPRFCDNCTDYDVDMRLRPYGVCGQRLSNDHFRHSLIDTSSHRSSNEDAPRVFDPPTRALPGQPRFVNDVPWIRRVISTKSSFCSLGMSLGVGPRCYSCPCPSLSFEVLEGRRWMWKPNLASSSAGLRLISTVPQFVSVQSTAGSLVEFLDNPLVMTNPASNRTNKIDLRVYGFISDSGTFLQTWVHASAILYRTSPNFQDYNASDPDIGAHVTNSGPAFYKKEYIAPSSRDFSTSFSTWGTLKKLRRIAPPGVVGRLDGVVSEACRLHTVAFGAAPRPPVSSSDQREIANTHFQAFVTDMYLSAGGEMLIVDPHIHTPFKPLRETAFHRESLDFDPELYRPSFHASWGSIFAPLSRLAADGRLWEEATVVAKECVSRIAECSHALDDDLARLVSDGAVATFFGFVWCGLIEADAALSACVAACGVQRKWEDWARRIRWLP* # ORIGINAL: g3613.t1 original gene structure, not modified by PASA NODE_180_length_33287_cov_43.3139 AUGUSTUS gene 4662 8867 . - . ID=g3613;Name=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS mRNA 4662 8867 . - . ID=g3613.t1;Parent=g3613;Name=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 8709 8867 . - . ID=g3613.t1.exon1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 8709 8867 . - 0 ID=cds.g3613.t1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 8322 8550 . - . ID=g3613.t1.exon2;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 8322 8550 . - 0 ID=cds.g3613.t1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 7842 7956 . - . ID=g3613.t1.exon3;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 7842 7956 . - 2 ID=cds.g3613.t1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 7543 7641 . - . ID=g3613.t1.exon4;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 7543 7641 . - 1 ID=cds.g3613.t1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 7306 7381 . - . ID=g3613.t1.exon5;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 7306 7381 . - 1 ID=cds.g3613.t1;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS exon 4662 7103 . - . ID=g3613.t1.exon6;Parent=g3613.t1 NODE_180_length_33287_cov_43.3139 AUGUSTUS CDS 4662 7103 . - 0 ID=cds.g3613.t1;Parent=g3613.t1 #PROT g3613.t1 g3613 MFFDGSVKSRRVVSLGGASSRAQNKSTLVEDKRAARAARELEAKHQKCARKIQAFYRSRAEIRLHRNAARHAWDANAAAFASATGAFHSVADMHTALRSLVFFASEARQDDWRRVEQGARAVIQAVQQQGFAFQSYLEQDSLRMAGFVLIIKQFLAVCVRTARAAVFGGADSTTVDVLLKVLVVMSEERVWNSPAQSSQIIQYRKSVMSSVAAAGLFETIGLILERAQDPAGSFAIAAIELSMRLLDASDPSSLARFALSIFCLPSFSSFPAPVIEYVRANLPMAELLPALAQHLPAEIKSLERITAQSLALLGNIVSMTMDTIAELPPSSAAAMARVLLPIVRALPKNVVALASAVQSAEGDDDLDSDEEATMQAIGHIEPMAWARGVKVMSPHFIRRLWQTMGASPPPDSADIAAVAELLSALIFRFKTAREDVLNTVAFAPRILRQLWLSACGPTLLDPLLKGRSDDRGALHAAGLLGLFSSGYAHLLKTVEDAELFNESSGRALFAQAELVSVIQVLRDVVVSLFLVNDPTMESSELAPADVQRLLSVRHELSALLWDLRERDIRVDFCPPQHWLHPSADVRPEEIPLELFDSESEEAVSAPSASGHETPTIGRQHAPTPRHGSALSASSSSIASRAVSLLRELPFVVPFVDRVRILQRLIDRDKLLSGRDHPFFASLSAKIRRPFIYEDGFSQLNKAGLAIKGRIRIALVDEHGLDEAGIDGGGLFKEFLTEFVKHAFDPTLGFFVQTEENFLYPNPNVSSVHPDYVAHYEFIGRMVGKAMYERILVELPFAAFFLSKIRNRPSNIGDLASLDRDLHKHLFFVKNYTGDFADLALTFSVGDDRLGSTRIVDLIPNGRNVDVTRQNRLQYIFLVANYRLNVSIRAQSAAFMRGLSDVMELKWLSLFDEDELRVIISGAETAVDLDDLRRHTNYGNGFTDVHPTIAMFWRVVALFSREQKRKLLKFATSCSRPPLLGFRELYPPFLIQNAGSASEGRLPTASTCMNVLKLPEFTDERTLREKLLYSIESGAGFDLS* # PASA_UPDATE: g13448.t1, single gene model update, valid-1, status:[pasa:asmbl_3996,status:12],[pasa:asmbl_3997,status:12], valid-1 NODE_2304_length_6786_cov_42.6546 . gene 3033 6786 . - . ID=g13448;Name=g13448.t1 NODE_2304_length_6786_cov_42.6546 . mRNA 3033 6786 . - . ID=g13448.t1;Parent=g13448;Name=g13448.t1 NODE_2304_length_6786_cov_42.6546 . five_prime_UTR 6786 6786 . - . ID=g13448.t1.utr5p1;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . exon 6096 6786 . - . ID=g13448.t1.exon1;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . CDS 6096 6785 . - 0 ID=cds.g13448.t1;Parent=g13448.t1;5_prime_partial=true NODE_2304_length_6786_cov_42.6546 . exon 5842 5917 . - . ID=g13448.t1.exon2;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . CDS 5842 5917 . - 0 ID=cds.g13448.t1;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . exon 4650 5681 . - . ID=g13448.t1.exon3;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . CDS 4650 5681 . - 2 ID=cds.g13448.t1;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . exon 3033 4400 . - . ID=g13448.t1.exon4;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . CDS 3229 4400 . - 2 ID=cds.g13448.t1;Parent=g13448.t1 NODE_2304_length_6786_cov_42.6546 . three_prime_UTR 3033 3228 . - . ID=g13448.t1.utr3p1;Parent=g13448.t1 #PROT g13448.t1 g13448 IASDRSCVLDESLLTGPLITAIINDPSKAYQAIRCNCPLDPTIPAGYFHMNNGTVYGGQQCDSCKPAVYYGQPTKCVKPGAGDNENLEVGGCEEFDVCKQCTCYGNINETEIWRDNCHADGSGDLVCTGCLGHTTGKQCESCQDGYYGVATRLDTNGILGLGHVIGANLTSLKCRKCDCNGQALDRVTVEGNEIDGIDGDMCTTTATGEWGEFKCRCNEGDGYIGDKCRKCKRGYKLVVGYNATGFPDPAYDYCEPCSDCVLNLYNDVLIPLETMLTDLENVTSKVNETIFSDIQGIESVYTDLDNRVATFENSDKPNVLAGIASFATTHQNSLNAITALGFSGINVDGLDDSIEAKTEALEQVDSDATNLFVGAQIAVDQLDNALGEIDASLTQSQDRLSAVDETINGAPFHGIQDSLVLSDSQADDVDAGIPALAALGQAATERIDDALEALAERNENVLQPILDEKFQVVVDGIAALTVSENAMEAHLADVAHTEEDRWTAAKASLVAMLDAQSAAIDALSDQLDEIGEMLDAAAGFNASESYDAAAAETYATLTASIAEVMAKRDTFVARIATAFSDFLNNVKLFRRRAEDILIGGAHPSLAATTTGTPVVVASLSNSSNVACGQGGFNQALNFNGSTAVTIPGASVPAIEGGMTIAAWVRQEPGNSGYLFSRSDDSGDLRYYALLLDGERDRLTFFYTTDPEADTHSTINTDLAKPIDDGNWHHIAVIFLPSSTGRVLVYVDGVKAADFNAGDSFVLNPSASLVFGARAPLAFFFIGRMEQLTVYPKALAGSIIALLNANKPSAPTGFINVQALTNAMAFGGNDLVQITADKMFQSTKQGLTIAAEIQQTANNEGYIACRSDTTGNTRYFSLVADGKKDLLTMYYLPSNMTTGYRTASVPFKTDDGKWHQVAVIVSGRTAMFFADGNIVGTVTLAGPLKDAPTTSTMEVGIRQPGRLGFSGQMRNVFVANLAMCPEDVAARRLA* # ORIGINAL: g13447.t1 original gene structure, not modified by PASA NODE_2304_length_6786_cov_42.6546 AUGUSTUS gene 611 2501 . - . ID=g13447;Name=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS mRNA 611 2501 . - . ID=g13447.t1;Parent=g13447;Name=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS exon 2327 2501 . - . ID=g13447.t1.exon1;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS CDS 2327 2501 . - 0 ID=cds.g13447.t1;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS exon 1888 2049 . - . ID=g13447.t1.exon2;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS CDS 1888 2049 . - 2 ID=cds.g13447.t1;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS exon 1474 1663 . - . ID=g13447.t1.exon3;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS CDS 1474 1663 . - 2 ID=cds.g13447.t1;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS exon 611 1238 . - . ID=g13447.t1.exon4;Parent=g13447.t1 NODE_2304_length_6786_cov_42.6546 AUGUSTUS CDS 611 1238 . - 1 ID=cds.g13447.t1;Parent=g13447.t1 #PROT g13447.t1 g13447 MALWKGAIFATAILWSMEVGAFLVCFPLLPLLLIAPHFYHSCMDLLAGTWFLVPAAFLELFFGIKMRFFGDVIPYDEAALVISNHPTRLDWMFLWSHFLRYARLSTLKIALKDSLRKVPVAGWVMQTFRFLFLSRRWEKDELHMTRLLGQMKEEKYPLLLLLFPEGTDLNPAARLRSEEFATKNGLKPYKYVLHPRTKGTTHTIACLDGAITAIHEFTIGYPDNFPIGEKGLLTGNLPSEIHFYVVRHPIESVPKGEDAQSKWIAERWRLKEQRLEQYYAEKPGNRKFDRPLHADSADFAGTLKLALVCWSIVSLCALYVFLSCEIVRWYVLVGHIVLPIVTALGGIDRIQLDLHARKHRGHHVKHTHTQSHHATVADESKKSR* # ORIGINAL: g2738.t1 original gene structure, not modified by PASA NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS gene 258 805 . - . ID=g2738;Name=g2738.t1 NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS mRNA 258 805 . - . ID=g2738.t1;Parent=g2738;Name=g2738.t1 NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS exon 698 805 . - . ID=g2738.t1.exon1;Parent=g2738.t1 NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS CDS 698 805 . - 0 ID=cds.g2738.t1;Parent=g2738.t1 NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS exon 258 590 . - . ID=g2738.t1.exon2;Parent=g2738.t1 NODE_4702_length_1308_cov_50.292_potentialcontaminant AUGUSTUS CDS 258 590 . - 0 ID=cds.g2738.t1;Parent=g2738.t1 #PROT g2738.t1 g2738 MRGRALLAGDVLSLNRRVSVALLVDAARSALATARSQLRGAVGAVDVHCALSRVISSINANGHFAACAWSVADVNSGGSEAAIVLAFNFTASHVQPFVVNDDGWPMLATSRFSGNAVMVSSLAFVLSGQNVSAFEMSAQSRARLTG* # PASA_UPDATE: g1882.t1, single gene model update, valid-1, status:[pasa:asmbl_4185,status:12], valid-1 NODE_2382_length_6478_cov_39.9702 . gene 1 838 . - . ID=g1882;Name=g1882.t1 NODE_2382_length_6478_cov_39.9702 . mRNA 1 838 . - . ID=g1882.t1;Parent=g1882;Name=g1882.t1 NODE_2382_length_6478_cov_39.9702 . five_prime_UTR 827 838 . - . ID=g1882.t1.utr5p1;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . exon 662 838 . - . ID=g1882.t1.exon1;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . CDS 662 826 . - 0 ID=cds.g1882.t1;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . exon 395 503 . - . ID=g1882.t1.exon2;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . CDS 395 503 . - 0 ID=cds.g1882.t1;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . exon 1 122 . - . ID=g1882.t1.exon3;Parent=g1882.t1 NODE_2382_length_6478_cov_39.9702 . CDS 1 122 . - 2 ID=cds.g1882.t1;Parent=g1882.t1;3_prime_partial=true #PROT g1882.t1 g1882 MARNHLPSPPLRNIYRLMRHGQSMANVAGIIVSNAEDGISDAYGLSDTGREQARESASLVQTVLYEREGRPVDRVFVYASDFSRARQTAEIVPCGLHAILNSLPTNNKQQQQQQQQQQQQQQQQQQQQQQQQ # PASA_UPDATE: g1884.t1, single gene model update, valid-1, status:[pasa:asmbl_4184,status:12], valid-1 NODE_2382_length_6478_cov_39.9702 . gene 5778 6368 . - . ID=g1884;Name=g1884.t1 NODE_2382_length_6478_cov_39.9702 . mRNA 5778 6368 . - . ID=g1884.t1;Parent=g1884;Name=g1884.t1 NODE_2382_length_6478_cov_39.9702 . five_prime_UTR 6368 6368 . - . ID=g1884.t1.utr5p1;Parent=g1884.t1 NODE_2382_length_6478_cov_39.9702 . exon 5778 6368 . - . ID=g1884.t1.exon1;Parent=g1884.t1 NODE_2382_length_6478_cov_39.9702 . CDS 5987 6367 . - 0 ID=cds.g1884.t1;Parent=g1884.t1;5_prime_partial=true NODE_2382_length_6478_cov_39.9702 . three_prime_UTR 5778 5986 . - . ID=g1884.t1.utr3p1;Parent=g1884.t1 #PROT g1884.t1 g1884 LLAALKAHPKFTNQFTFPSAGPDVSPVWFGFCFVLSDLYVDQKQAYIEYLLKAGVENRPIVSGNFARQPGLKLFGIDLDPETFPGAERLTKQGLFIGLHATHLPDIQVQQLADILLGFNFKKRPLE* # ORIGINAL: g1883.t1 original gene structure, not modified by PASA NODE_2382_length_6478_cov_39.9702 AUGUSTUS gene 1571 4592 . - . ID=g1883;Name=g1883.t1 NODE_2382_length_6478_cov_39.9702 AUGUSTUS mRNA 1571 4592 . - . ID=g1883.t1;Parent=g1883;Name=g1883.t1 NODE_2382_length_6478_cov_39.9702 AUGUSTUS exon 3615 4592 . - . ID=g1883.t1.exon1;Parent=g1883.t1 NODE_2382_length_6478_cov_39.9702 AUGUSTUS CDS 3615 4592 . - 0 ID=cds.g1883.t1;Parent=g1883.t1 NODE_2382_length_6478_cov_39.9702 AUGUSTUS exon 1571 3331 . - . ID=g1883.t1.exon2;Parent=g1883.t1 NODE_2382_length_6478_cov_39.9702 AUGUSTUS CDS 1571 3331 . - 0 ID=cds.g1883.t1;Parent=g1883.t1 #PROT g1883.t1 g1883 MDPIGTVQNLITVAQAIHGIVQTVRSNRCQCLRLGERVRAVVGPIQALSGEQRKLLRPDVRDGLGQLLDTLRDCQKFIMKFADAGFVEKVLKHGSYAERFDELNQRLFHGATILQLGLDVQTVFDRSADKEDEVKDRKANADRQEELLRLSREQMAGQKNLEDLLKSFRAQFQQMVHVMPAGQSSTPSRSEFEDIAIPFDELSFGDELGAGAFGRVYRGKYGSDHVAIKRLVCDELSEETLMEFKNEVRIMKALRHPNVVLLLGACFEKERYAIVLEYMENKSLFHLLHGEVDLPWGLRWRMACETAKGMAHLYSRKPPIQHRDFKSLNVLVDKDYRVKVSDFGLSNARTETSTRTHSGEGTLQWKAPELFRKGAKFTEKSDVYSYGIVLWELASRLVPWEKEEREGGVVLAMVLAGDRPDIPNDCPTALAQLIAACWAPSADARPSFAGAVEACEAHVDAGSSRPPSLVILKSASAADLAVPGSPGAGHVSGRMSPLPPASPLASLRLKNESVREFWCSHWNANDTRATLDDFLDCVCAEFPSLTAGETHLRNVLDRHNRGFVSMADLNALTETRTTESVDSIFASFIPKAKGEFLRALEAYHSRANDLAAARTLFESVVATGSSATDEEKARAHIYLFRMCANGWGGLMNVALSQTHKQAVTPSIFASLRNVSVVDGADSAIRAFELGWCYEFGTGGTKDASMAVTWYRKAADQGNAAAQTNLGNCYLNGTGVAKDESMAVTWYRKAADQGYAAGQYGLGHCYSKGTAGVTADKSMAVTWFRKAADQGNVNAQNRLGVYYSSGTGVAKDESMAVTWYRKAADQGDATAQFNLGRSYANGTGVTTDKSMAVTWYRKAADQGYADAQFNLGVCYSTGSGVTTDESLAVKWFQKAADQGHAKAQAMLGAMGLA* # PASA_UPDATE: g1796.t1, single gene model update, valid-1, status:[pasa:asmbl_1800,status:3], valid-1 NODE_1500_length_10893_cov_41.1003 . gene 4559 6889 . - . ID=g1796;Name=g1796.t1 NODE_1500_length_10893_cov_41.1003 . mRNA 4559 6889 . - . ID=g1796.t1;Parent=g1796;Name=g1796.t1 NODE_1500_length_10893_cov_41.1003 . five_prime_UTR 6691 6889 . - . ID=g1796.t1.utr5p1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 6577 6889 . - . ID=g1796.t1.exon1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 6577 6690 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 6420 6471 . - . ID=g1796.t1.exon2;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 6420 6471 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 6297 6346 . - . ID=g1796.t1.exon3;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 6297 6346 . - 2 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 6088 6200 . - . ID=g1796.t1.exon4;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 6088 6200 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 5856 5925 . - . ID=g1796.t1.exon5;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 5856 5925 . - 1 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 5648 5725 . - . ID=g1796.t1.exon6;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 5648 5725 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 5416 5493 . - . ID=g1796.t1.exon7;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 5416 5493 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 5194 5315 . - . ID=g1796.t1.exon8;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 5194 5315 . - 0 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 4916 5055 . - . ID=g1796.t1.exon9;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 4916 5055 . - 1 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . exon 4559 4782 . - . ID=g1796.t1.exon10;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . CDS 4676 4782 . - 2 ID=cds.g1796.t1;Parent=g1796.t1 NODE_1500_length_10893_cov_41.1003 . three_prime_UTR 4559 4675 . - . ID=g1796.t1.utr3p1;Parent=g1796.t1 #PROT g1796.t1 g1796 MAHDSNAVILVTAGYDHTIRFWEPHHGTSYRTVQHPDSQVNCLKITPDKQYIAAGGNPHIRFYEINSSATTPTLTYDGHTGNVSTIGFQKDGKWMYSGSEDGTVKIWDLRTPGCQRDYEHGSPVNCVALHPNQGEIISGDQLGRMKIWDLRANRCIEQLIPEGDSAIRSISIAADASQMVAANDSGNCYVWRLNNFASEPTTLTPLQRICAHKGYILKVLYSPDMSLLATTSSDMTVKVWNTTNYSLNKTLSGHSRWVWDCAFSSDSAYLVTASSDNTARLWDIAQGESIRTFSGHQKPIVSLALHD* # PASA_UPDATE: g1797.t1, single gene model update, valid-1, status:[pasa:asmbl_1798,status:3], valid-1 NODE_1500_length_10893_cov_41.1003 . gene 7271 8847 . + . ID=g1797;Name=g1797.t1 NODE_1500_length_10893_cov_41.1003 . mRNA 7271 8847 . + . ID=g1797.t1;Parent=g1797;Name=g1797.t1 NODE_1500_length_10893_cov_41.1003 . five_prime_UTR 7271 7327 . + . ID=g1797.t1.utr5p1;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . exon 7271 7332 . + . ID=g1797.t1.exon1;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . CDS 7328 7332 . + 0 ID=cds.g1797.t1;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . exon 7610 7762 . + . ID=g1797.t1.exon2;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . CDS 7610 7762 . + 1 ID=cds.g1797.t1;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . exon 8067 8847 . + . ID=g1797.t1.exon3;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . CDS 8067 8559 . + 1 ID=cds.g1797.t1;Parent=g1797.t1 NODE_1500_length_10893_cov_41.1003 . three_prime_UTR 8560 8847 . + . ID=g1797.t1.utr3p1;Parent=g1797.t1 #PROT g1797.t1 g1797 MSKISREGLYEAIRDVIKGSQEKPRKFTETVELQVGLKNYDPQKDKRFSGTVSLANVPKPKMRICVMGDQQHCDEAKALDIPFMTVEDLKKLNKNKKLIKKLAKKYDAFLASESIIKQIPRLLGPGLNKAGKFPLLLTHAESLSEKIRETKSTIKFQMKKVLCLGVAVGHVAMNEDELAQNTLLSINFLVSLLKKNWQNIRSLYVKSTMGKPQRLY* # PASA_UPDATE: g1795.t1, single gene model update, valid-1, status:[pasa:asmbl_1799,status:12], valid-1 NODE_1500_length_10893_cov_41.1003 . gene 138 4198 . - . ID=g1795;Name=g1795.t1 NODE_1500_length_10893_cov_41.1003 . mRNA 138 4198 . - . ID=g1795.t1;Parent=g1795;Name=g1795.t1 NODE_1500_length_10893_cov_41.1003 . five_prime_UTR 4149 4198 . - . ID=g1795.t1.utr5p1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 3996 4198 . - . ID=g1795.t1.exon1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 3996 4148 . - 0 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 3581 3769 . - . ID=g1795.t1.exon2;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 3581 3769 . - 0 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 2139 3294 . - . ID=g1795.t1.exon3;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 2139 3294 . - 0 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 1571 1854 . - . ID=g1795.t1.exon4;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 1571 1854 . - 2 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 1082 1222 . - . ID=g1795.t1.exon5;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 1082 1222 . - 0 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 614 754 . - . ID=g1795.t1.exon6;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 614 754 . - 0 ID=cds.g1795.t1;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . exon 138 250 . - . ID=g1795.t1.exon7;Parent=g1795.t1 NODE_1500_length_10893_cov_41.1003 . CDS 138 250 . - 0 ID=cds.g1795.t1;Parent=g1795.t1;3_prime_partial=true #PROT g1795.t1 g1795 MAPSVALTGAEVRAKFVEFFEKKYAHTHVVSSSVIPHEDPTLLFANAGMNQFKPIFLGTADPQSDMAKWKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTVAFGLPKERLYVTYFGGNASSGLDPDTEARDLWISAGIPAERVLPFGMKENFWEMGETGPCGPCSEIHFDRIGGRDASALVNMDDPDVLEIWNLVFIQFNREPDSSLRQLPSKHVDTGMGLERVVSVLQDKRSNYDTDLFTPIFAEIQRLTGARAYTGLVGKDDVDGLDMAYRVVADHIRTLTIAITDGGLPGNTGRNYVLRRILRRAIRYCAEKLNAKPGVFASLVHTVVAILGDAFPSLRRNPQYVVEIINEEEQQFRRTLDRGRRLFERELTKITDGIIPGTLAWTLYDTYGFPYDLTEIMASEKNMKIDKVGYAEAESKAREASKGHAEGAAQKIVLDVHAITALKNKGTPATDDAPKHDYTKDESGNYAFPDTTARVLAVYQNGAFVDNASAGVVRVGVVLDRTNMYAEQGGQTYDVGSLIGKDDAEIAVEDVQVYGGYVLHVGLVKQGSISVGDSVTVSVDGTRRRPVMSNHTATHMLNYALLNVLGTDVDQKGSLVAADKLRFDFSCGKPLSSEQLKRVQDVVTNVAAQNGTVYKKEVPLAVAKQIFGVRAVFGETYPDPVRVVSVGVSVDDLIANPANAEWARASIEFCGG # ORIGINAL: g1798.t1 original gene structure, not modified by PASA NODE_1500_length_10893_cov_41.1003 AUGUSTUS gene 9189 10303 . - . ID=g1798;Name=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS mRNA 9189 10303 . - . ID=g1798.t1;Parent=g1798;Name=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS exon 10178 10303 . - . ID=g1798.t1.exon1;Parent=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS CDS 10178 10303 . - 0 ID=cds.g1798.t1;Parent=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS exon 9816 9886 . - . ID=g1798.t1.exon2;Parent=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS CDS 9816 9886 . - 0 ID=cds.g1798.t1;Parent=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS exon 9189 9621 . - . ID=g1798.t1.exon3;Parent=g1798.t1 NODE_1500_length_10893_cov_41.1003 AUGUSTUS CDS 9189 9621 . - 1 ID=cds.g1798.t1;Parent=g1798.t1 #PROT g1798.t1 g1798 MLIFITLRSNPPHLQSNLQFISRFANPSRLLSGEAGYHFTNLCCAVAFIEKIDATSLSLTQDEFDRHMAASLPVAPPAAGAGNIVQPSIAVMRRNSVAIRALRERQDLLLRCAAQLYSATQQLHEDAYGQAVADMISPSKRRLSAAGAESAAKATPVRVDLKTGEVAAQNASMDMREASMAGSPVESAIVSVADESPSQSRVDIAMTEV* # ORIGINAL: g12815.t1 original gene structure, not modified by PASA NODE_161_length_34066_cov_41.1763 AUGUSTUS gene 8222 9576 . + . ID=g12815;Name=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS mRNA 8222 9576 . + . ID=g12815.t1;Parent=g12815;Name=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 8222 8590 . + . ID=g12815.t1.exon1;Parent=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 8222 8590 . + 0 ID=cds.g12815.t1;Parent=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 8783 8956 . + . ID=g12815.t1.exon2;Parent=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 8783 8956 . + 0 ID=cds.g12815.t1;Parent=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 9376 9576 . + . ID=g12815.t1.exon3;Parent=g12815.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 9376 9576 . + 0 ID=cds.g12815.t1;Parent=g12815.t1 #PROT g12815.t1 g12815 MESTETTNSHQSQYMHGAPQNETGGVPSLSSTGAASSQPSTNAVHLHSRRQGAFQDAVNARIGDAKTFLRGTAEKVRLLPGTDERLEANTRQDDLDEIQGRTLATIARYRGEPPEDITRRIRSLEIEWDVERTLELLSSSLVLLTLLVGGSWRLLTFVVASFLLNHALYGWCPPLPVLRRLGIRTSKEIHEEMVALKVLRGDFDTQLAQRSTGPADPVELWRESKLQSKLMSPFAHADLPSVAAKEE* # PASA_UPDATE: g12818.t1, single gene model update, valid-1, status:[pasa:asmbl_2165,status:3], valid-1 NODE_161_length_34066_cov_41.1763 . gene 16480 21451 . + . ID=g12818;Name=g12818.t1 NODE_161_length_34066_cov_41.1763 . mRNA 16480 21451 . + . ID=g12818.t1;Parent=g12818;Name=g12818.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 16480 16669 . + . ID=g12818.t1.utr5p1;Parent=g12818.t1 NODE_161_length_34066_cov_41.1763 . exon 16480 16830 . + . ID=g12818.t1.exon1;Parent=g12818.t1 NODE_161_length_34066_cov_41.1763 . CDS 16670 16830 . + 0 ID=cds.g12818.t1;Parent=g12818.t1 NODE_161_length_34066_cov_41.1763 . exon 16989 21451 . + . ID=g12818.t1.exon2;Parent=g12818.t1 NODE_161_length_34066_cov_41.1763 . CDS 16989 21321 . + 1 ID=cds.g12818.t1;Parent=g12818.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 21322 21451 . + . ID=g12818.t1.utr3p1;Parent=g12818.t1 #PROT g12818.t1 g12818 MAGDARQLRRMHVSVILLAVLSVAHFFDDAASQGEACPSQCQCSPNTAPTCNFTDWNAVDAKISMPISLAVNDTDSLRAALSAPDTSALFGLPNHTMLLTDSITIDGDVLNGSVLVIGGSAGEAFVFACSGMLSGPAFVVTNGAQVVFNRVQFSSCPEGALSVASGSYVGLRGCQFLANSASMSGGALSIGGTVEAMQTLFESNTAFRGGAVAVGAGEGADAGVFICTDCTFSGSSSGESGGTFSFAQSAFVALINSQITGSSSGTGFGGAVFIGDFAKLLLFGCTVSDTTSTLTDGGFAYVMGNASVEAIGTSFRSCRATRQGGISYLRDGSRMTMTGCITQLTYAGACGGIVSLGDTAQFIVTATRMSQSSVGRRGGLLCGMDTASVYVASSSMYLFDAVEGAVMHGVGAISARFIDVNVTKATGRQSGGAFVLSDSTSVSILRGSFRECRASTQQGGFALIMADAVLNTTSCTWANVSANDGGGLVASYGLALFRMSKGKVVDSVAAGGAGGAFYVGGSSVVDISESSFSQLSSEASGGFAYIVDVGLVHLSLSSIANTISFSGDGGAVAMTGDARLVAVRTQITFASAPGGTGGLIAASSRSSMQLTSITAEQTTAMRGGCIRLAGRSIADISRSHFTSTLSQTSGGFLWAGDQARVRVVLSTVESSTSRRGFGGIFMITAESQLFVSDSFFKSGSCLYSGGFLYGFDSAVIRIQSSRITKMWAQSGSGGAISFVPDISNATALTLQNVYFSDNSAAMNGGCLHVGSATRFVVNGSVFMLCTAGQGDQTYGAGGGMYINFAAAQGSKPGADAKLITITQNSFVGNSAALSPGVVTLGPLPLTLPSFAGNSFSSNWSPYESDPGFSTPIARFTVGQLPSIEPGEYLAPFNITALDYYGHATFVPPIRPVAIRLEIQDADMVLDGELLRGFLEDSSVTFSNIRITAAPGQYSLLVRSGNRLYDSRSAPFDGSSVVRITVAECSGGRKFGVDASTNKRGCLSVQCPLVCHHGGVCAPDGSEFYCKCRFGWTGPTCSSPMILVGLIVMLSVVVGGVFVMLVSTRQLVSPLFTERYSDAIATAGGKYRRAVFVGGVIVDIFLRSLDVGIVAVGLLAVTCGSHVIPRVPILGTLLGIHACVYLAMMYCSFSAVRALVRMTATSSKSDRPGVGHQESLGAVCSLSDWRTLLVCRRRIAWCTLLMTLGNLFIAVLFGIMLEEAVDSLYDSTSEFAYLAVFAVSLSMFGLGVGRVGVVYGVICDISGVHQSSMFAPVSSVPVPTVTDGCEMATMETPVIHLKARSSRTYSDSDEDAVGTLCVGVASSALGGMHHEADMKDCLIAASTGHLGRTLVIRSGCHAGSCSDDEALSSSSVQSPHDEDTWMCGGDIKLRLRHSLLDRSPLVADSGECTDSGHGSVGGSVGCVGSVGSGSVAAPSRALVELMTIDGVLTTGISQLNMNRRHVRSLMLLDLGSQDASGGSRRVDESALTAVMVVGHTDV* # ORIGINAL: g12817.t1 original gene structure, not modified by PASA NODE_161_length_34066_cov_41.1763 AUGUSTUS gene 14061 15738 . - . ID=g12817;Name=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS mRNA 14061 15738 . - . ID=g12817.t1;Parent=g12817;Name=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 15376 15738 . - . ID=g12817.t1.exon1;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 15376 15738 . - 0 ID=cds.g12817.t1;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 15185 15278 . - . ID=g12817.t1.exon2;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 15185 15278 . - 0 ID=cds.g12817.t1;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 14923 15057 . - . ID=g12817.t1.exon3;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 14923 15057 . - 2 ID=cds.g12817.t1;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 14554 14739 . - . ID=g12817.t1.exon4;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 14554 14739 . - 2 ID=cds.g12817.t1;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 14061 14227 . - . ID=g12817.t1.exon5;Parent=g12817.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 14061 14227 . - 2 ID=cds.g12817.t1;Parent=g12817.t1 #PROT g12817.t1 g12817 MDKGAKILVTGSNGMVGRHLVKTLRADGYTNVVAHTRADCDLEDATAVDAYFAQLKPDYAFLIAALVGGISANIKDPVGFLSRNLRLEVNMFEACHKHNVRKVLYLGSSCIYPRECPQPMKEEYLMTGPVEPTNEGYALAKICGLKLAEYYHRQYGMSVVCPMPCNIYGEGDHFDLAKSHVLSALVKRFVDAKNTSAPSVTLWGTGSARREFVNVIDVTRGMLFMMDSILSPDIHNLGPGTDVSIKELAEIISGKVGYEGALEWDHTKPDGMMRKCLEVSKMKEKGFVTQVELSDGIDAVIAEYRALLASGEAH* # PASA_UPDATE: g12819.t1, single gene model update, valid-1, status:[pasa:asmbl_2166,status:3], valid-1 NODE_161_length_34066_cov_41.1763 . gene 21702 23164 . + . ID=g12819;Name=g12819.t1 NODE_161_length_34066_cov_41.1763 . mRNA 21702 23164 . + . ID=g12819.t1;Parent=g12819;Name=g12819.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 21702 21729 . + . ID=g12819.t1.utr5p1;Parent=g12819.t1 NODE_161_length_34066_cov_41.1763 . exon 21702 22586 . + . ID=g12819.t1.exon1;Parent=g12819.t1 NODE_161_length_34066_cov_41.1763 . CDS 21730 22586 . + 0 ID=cds.g12819.t1;Parent=g12819.t1 NODE_161_length_34066_cov_41.1763 . exon 22821 23164 . + . ID=g12819.t1.exon2;Parent=g12819.t1 NODE_161_length_34066_cov_41.1763 . CDS 22821 23013 . + 1 ID=cds.g12819.t1;Parent=g12819.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 23014 23164 . + . ID=g12819.t1.utr3p1;Parent=g12819.t1 #PROT g12819.t1 g12819 MAERTLEMCSVLKRRSNSTLLVKTRSLSLVESNFRSSSLERMSGVVIHARVTLRGCGLPLAQIVIPIHARRAHTAAAPTAAAHSHEHRHHVGTKHHAKRFDFVHSHEHATGIDAPLAVVIGWMGAKSRYLSKYLDYYHQKGAETISVVPRAQDVLMPSRGRERTEALLDYIASRGLHSRPLVFHCFSTGGYMYGQILNALEARKASHPEYTSIERSIRGQIFDSVVDHTGIPYGLPRAVFPDSPVKQMVAQRSITAFLKAAKPVAAALKNASDIFHKNSVKSPSLWYYSHDDDIAPSKDIETVISKWRNSGIDCTTVSWDKSRHVTHMRMHPDRYWGELDAFWTRSVAK* # PASA_UPDATE: g12821.t1, single gene model update, valid-1, status:[pasa:asmbl_2167,status:12], valid-1 NODE_161_length_34066_cov_41.1763 . gene 28488 30841 . + . ID=g12821;Name=g12821.t1 NODE_161_length_34066_cov_41.1763 . mRNA 28488 30841 . + . ID=g12821.t1;Parent=g12821;Name=g12821.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 28488 28537 . + . ID=g12821.t1.utr5p1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 28488 28710 . + . ID=g12821.t1.exon1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 28538 28710 . + 0 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 28935 29006 . + . ID=g12821.t1.exon2;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 28935 29006 . + 1 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 29243 29366 . + . ID=g12821.t1.exon3;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 29243 29366 . + 1 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 29542 29617 . + . ID=g12821.t1.exon4;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 29542 29617 . + 0 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 29759 30204 . + . ID=g12821.t1.exon5;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 29759 30204 . + 2 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 30332 30385 . + . ID=g12821.t1.exon6;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 30332 30385 . + 0 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . exon 30580 30841 . + . ID=g12821.t1.exon7;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . CDS 30580 30693 . + 0 ID=cds.g12821.t1;Parent=g12821.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 30694 30841 . + . ID=g12821.t1.utr3p1;Parent=g12821.t1 #PROT g12821.t1 g12821 MSTETEAFASRLQSFYAGAAMTLSISMGHQLGLFEALATFDDPATSAEIAAKANLNERYVREWLNGIAMADIIHIQQGDQLRYMLPKSHAAVLTGSVANMAPMASIIPLVTPVFEDIKTCFRKGGGVPYCKYHGFHELMGEFARRQQDELVPKFVPSVQGLHERLTSGIAVADVGCGIGVAIRTLAKAYPNSTFLGIDLAKEAIDMGSKLAEEAGVAGNCSFLALDAAEIHTRADLQGRFDYVTTFDAIHDQARPDVVLLGIRKMLRAGGLYSLVDIHAHTNPLDNRSDPFAPLFYTISYMHCMTVSLADEGMGLGTMWGIEKAQAMLRDAGFTEQQILGKDGFNVHILCRV* # ORIGINAL: g12822.t1 original gene structure, not modified by PASA NODE_161_length_34066_cov_41.1763 AUGUSTUS gene 31721 33577 . + . ID=g12822;Name=g12822.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS mRNA 31721 33577 . + . ID=g12822.t1;Parent=g12822;Name=g12822.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 31721 33577 . + . ID=g12822.t1.exon1;Parent=g12822.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 31721 33577 . + 0 ID=cds.g12822.t1;Parent=g12822.t1 #PROT g12822.t1 g12822 MLATRPALSMGPKRRSNVSAIRLMHCFVGVLATVAVLLCGAAHGQLGDVLSAQTMALLAAPVFTTNASRMWFDSQGCHLDGAKCPDQLTWGLMCGPCNDNQYFYAIGNIINMTSPDAVFALAPDTFLMPYPYRRDNSFSDNLQTWKPQILASGTVMVTVPRGRIVMPKRTGVYATNSGYGGGGGGQGEYFSYNATVCDDKQISVSGGTTGAFSDGTDGYAGYAPNSGQDLSWANMNVQTTNKYHEPCVGYGGTGGGVGGFDGGGANASVSSTRAYVAAGLEGGRGGGPFGGRGGVPSGRNEKCNASFVNLPEAAGGSGQPGGYLGVGVNGESQQQADASDDVYLGGGGGGGAGGRSSGRFCCGGGAGGAGGSLAVRASKGCAAGAGGNGGAVGGGAVVLSAQDIEFDGDIRAHGAGAYIDGKPRAGYGAGGGVLLKATGSLTVGANAKIASQGAVAVMEGTSTSTENGGSVKLRAGTLVSAVNVANAVIAGRLSIVYQSIQDPSKPLGETLTATQLASYTKIVQISGSKVYFNTSGCFADGAPCPNTLQYTATCSGCGPSSKLYYFNILNPINLTTPGVEFTVGTNVVLRPYTYAPQGKNFAVKTWAPFGVSGSGMSI* # ORIGINAL: g12816.t1 original gene structure, not modified by PASA NODE_161_length_34066_cov_41.1763 AUGUSTUS gene 10636 13193 . - . ID=g12816;Name=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS mRNA 10636 13193 . - . ID=g12816.t1;Parent=g12816;Name=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 13029 13193 . - . ID=g12816.t1.exon1;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 13029 13193 . - 0 ID=cds.g12816.t1;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 12710 12796 . - . ID=g12816.t1.exon2;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 12710 12796 . - 0 ID=cds.g12816.t1;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 12295 12404 . - . ID=g12816.t1.exon3;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 12295 12404 . - 0 ID=cds.g12816.t1;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 11981 12086 . - . ID=g12816.t1.exon4;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 11981 12086 . - 1 ID=cds.g12816.t1;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS exon 10636 11664 . - . ID=g12816.t1.exon5;Parent=g12816.t1 NODE_161_length_34066_cov_41.1763 AUGUSTUS CDS 10636 11664 . - 0 ID=cds.g12816.t1;Parent=g12816.t1 #PROT g12816.t1 g12816 MAWRSTPRDDMSRNAVAFAATTFAFVAMQSIFSMYYVDLFLNVYGVSSWWFYVSQALYLVWNAVNDPLFGWIQDMSSSPGRRQQAILHGAPLFAASFLVPWFDMGAGSELLTGLHMVFALCFWDCMFTYVVLAQCALFAEISPNLEDRTRVLQYSQVASMLGSCSVFVAHVLWDKSNLLPFRVMCVVVAVVAYLCFRYTGLHARTHPHFRPSEPAEGAKNGEKSGDLADGSLRNFLKLTMQIVRQRNFQLFVGMNFLQIFHSTFASSFYTIFEDSLLGSPFDSSARAVRSVIAGASGSIPQLAVLFLSPLLPTMGSYALIRYSFILKVFLGGLFLLAAQSLGASAPLSAAIILGYMVVNRAIAEGTFALFNLSLADIIDADVVGSRRSAPISSMFFGTNALFTKPAQSLSPMFVLAVLASKGYVGSGAAQDALAAAPGSHVDPAGEPLRAAMLLLLGAIPVVCGIFQFVLWSGYGLRSSHRSKQTSLLAAAQTELMDV* # PASA_UPDATE: g12813.t1, single gene model update, valid-1, status:[pasa:asmbl_2164,status:12], valid-1 NODE_161_length_34066_cov_41.1763 . gene 216 4360 . + . ID=g12813;Name=g12813.t1 NODE_161_length_34066_cov_41.1763 . mRNA 216 4360 . + . ID=g12813.t1;Parent=g12813;Name=g12813.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 216 253 . + . ID=g12813.t1.utr5p1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . exon 216 1272 . + . ID=g12813.t1.exon1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . CDS 254 1272 . + 0 ID=cds.g12813.t1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . exon 1622 2420 . + . ID=g12813.t1.exon2;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . CDS 1622 2420 . + 1 ID=cds.g12813.t1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . exon 2769 3485 . + . ID=g12813.t1.exon3;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . CDS 2769 3485 . + 0 ID=cds.g12813.t1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . exon 3818 4360 . + . ID=g12813.t1.exon4;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . CDS 3818 4228 . + 0 ID=cds.g12813.t1;Parent=g12813.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 4229 4360 . + . ID=g12813.t1.utr3p1;Parent=g12813.t1 #PROT g12813.t1 g12813 MDINNPNQTQMACGFIDYIIEPSYACLQQLLPLAVICYEQLKTNRRRWADIKEEEEEARRLAMDDSANSALREESEVAADCHGGDVNVSAPTSSHVPSAPRVQRSGTLLSLASGNRDREAPQQHLPSLRRRFSLSPSGEVEIPSSFSIRQTWFQSTSGSKRKKSSSSLLDADGSDVVASVCAEVPHTGAHDDARDAYGETDGASVGKAGVSAMQRRVLRVVDGAAWTAVSVFCTLVALFGGDIVEIAFDASADLGYSGFVVAVIAFFVADIVLRCYAEAKYALSFFFWVDVLGTVMILPDLVWVSDWMFGVVDLTVARGARIARVGARTSRVGRLPRALRFLPWIRTLNDSVPPTPSRLGAKIAELISRRVVAVVLAVLIAFPLLQYNPTDTAAAMETTLLLLSTMSPNTSRQLATQLFIQSTPRLLSLSINGSAVYGTQAHDLRSVEIESYAYTFSDGIGSSCDIDARHEVQVSAGLNIVQTAFFMALLAIAAWAFSRDARTLVVGPFEAMLQVVKKVAFVLAALRNEDDTDVSSPEIEASFILSAISKMAGLLTVGFGEAGTGIIEKNLSDAGELQPMVAGTKVTAIFGFCDIRRFTDATEVLQEDVMIFVNSLAHLIHKQCKDSYGFPNKNVGDAFLLVWKLDQDFRPVLEEPGRKGHSGDGGKGDGAGVPSVYPTRQRSAMRLSTVCMRPIVDTAADGALEAFVVVVEELELLNLGKPGVWFGEAEFVKLERIRAAIPAFNVDIGFGLHFGWAIEGAIGSRYKIDCSYLSPHVNTSSRLEAATKQYGSPILMSGEFVELLSPPFQQMVRKIDRVTVRGSKTPLDLYTYDFHTYVWGTDLRKAYGGMVSHNPDALSASNESSGDDRDCARDKRATKTPKNPPPQVVFGAKKGLEDGGAGAAEDDDPSDHGPVEDYARRFSEGVAAYIAGTWDVAAKRLNKCRKLAPRDTPVQVLLAFMEEHNFTAPADWPGHRALKEK* # PASA_UPDATE: g12820.t1, single gene model update, valid-1, status:[pasa:asmbl_2169,status:12],[pasa:asmbl_2170,status:12], valid-1 NODE_161_length_34066_cov_41.1763 . gene 23195 27856 . - . ID=g12820;Name=g12820.t1 NODE_161_length_34066_cov_41.1763 . mRNA 23195 27856 . - . ID=g12820.t1;Parent=g12820;Name=g12820.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 27764 27856 . - . ID=g12820.t1.utr5p1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 27681 27856 . - . ID=g12820.t1.exon1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 27681 27763 . - 0 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 27296 27508 . - . ID=g12820.t1.exon2;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 27296 27508 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 26987 27161 . - . ID=g12820.t1.exon3;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 26987 27161 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 26528 26767 . - . ID=g12820.t1.exon4;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 26528 26767 . - 0 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 26092 26262 . - . ID=g12820.t1.exon5;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 26092 26262 . - 0 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 25783 25874 . - . ID=g12820.t1.exon6;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 25783 25874 . - 0 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 25537 25668 . - . ID=g12820.t1.exon7;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 25537 25668 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 25243 25383 . - . ID=g12820.t1.exon8;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 25243 25383 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 25007 25117 . - . ID=g12820.t1.exon9;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 25007 25117 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 24308 24854 . - . ID=g12820.t1.exon10;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 24308 24854 . - 1 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 24063 24141 . - . ID=g12820.t1.exon11;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 24063 24141 . - 0 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 23612 23806 . - . ID=g12820.t1.exon12;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 23612 23806 . - 2 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . exon 23195 23467 . - . ID=g12820.t1.exon13;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . CDS 23301 23467 . - 2 ID=cds.g12820.t1;Parent=g12820.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 23195 23300 . - . ID=g12820.t1.utr3p1;Parent=g12820.t1 #PROT g12820.t1 g12820 MAEARSAVSVPVVQFSLTDEGVFFRVDRNAVPLLARAVRRSVLRRAFRLRNVVLNAIFPASPMHALILIAVMMGVMLSGDGRLQGISDWLWEWDNYIPRSHSFSLPLRAFAVSFVIGASLFLLMAYARRLALRVVLAYRGWLYEEPKKERYSTIAWAVIVKLLSGRKPRLYSFQGSLPRMPVPAVKDTIAGYLTTVRPLQTPEEFAKTSKLAQDFLSNEAAKLQRYLILKSWWSPNYVTDWWEKYVYLRGRSPIMINSNYYGLDGAKWAPTNRQLARAAGLLHQLSLFKRLLDREELAPLVIRGTVPLCMWQYERMFSSCRIPRRDGDKIVHYDRTESQHVVVFCKGSYYSVPFQHRDGSLLDQLEFESQLVMVVEDASKRTHMSPGESAVAALTADDRNVWADARSQFFSTGINRLSLEAVERAVCIVALEDSSPTLDESGATFMGRQLLHGDGTNRWFDKSFTLVVFANGKAGINAEHAWADAPTLAHMWEWINTGEMLDDIYATDGTLRSTPGFTPRTLPAPARLDWSFGAAGEAQIEKSLASAKERIADLDLRIVYFEDYGKGLMKRARVSPDAFIQMALSLAYRSINDRFPLTYESSMTRLYLQGRTETVRPVSDESVAFVEAMRDPKATKEEKLTKLRAAGEMHQRRYRDAMSGKGVDRHLFALYVLSMGLGMESPFLKDALSQPWRLSTSQQPQQQTDRWDATRTDLRHKICPGGGFGPVADDGYGVSYMVAGEQNIFFHISSKRSCPTTDSNKFAAAIIGALADMKALLQDPK* # PASA_UPDATE: g12814.t1, single gene model update, valid-1, status:[pasa:asmbl_2168,status:3], valid-1 NODE_161_length_34066_cov_41.1763 . gene 4937 7350 . - . ID=g12814;Name=g12814.t1 NODE_161_length_34066_cov_41.1763 . mRNA 4937 7350 . - . ID=g12814.t1;Parent=g12814;Name=g12814.t1 NODE_161_length_34066_cov_41.1763 . five_prime_UTR 7159 7350 . - . ID=g12814.t1.utr5p1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . exon 7119 7350 . - . ID=g12814.t1.exon1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . CDS 7119 7158 . - 0 ID=cds.g12814.t1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . exon 6357 6710 . - . ID=g12814.t1.exon2;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . CDS 6357 6710 . - 2 ID=cds.g12814.t1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . exon 5961 6193 . - . ID=g12814.t1.exon3;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . CDS 5961 6193 . - 2 ID=cds.g12814.t1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . exon 4937 5711 . - . ID=g12814.t1.exon4;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . CDS 5358 5711 . - 0 ID=cds.g12814.t1;Parent=g12814.t1 NODE_161_length_34066_cov_41.1763 . three_prime_UTR 4937 5357 . - . ID=g12814.t1.utr3p1;Parent=g12814.t1 #PROT g12814.t1 g12814 MFARVLRLPRACGAATQAHHAFAVSRAPSLVSSVQSWHPQSSPMLAMSANAVASIPRSPATCHVRTYASKTQRKLAYYMNFADSRQRKAEAAARRERQLKVMWKARGFPVGDEAADAAQAQKDIRDEFDYVDPETDLNILEKRTPRKGLVLDRWYRTFRSSAMLAVFQHYGASVKEWDELRRRLVGTGITARVFPNSIVKRTLEGSKFDAMRGLFQGPTVVFYSAEDRIAVLSQTVQGLSKFSLLGVKLNDAFLNIDDVARYATMPPLERIREDLVATVGMPAAALARALGQTPQALAAALEAHSKSRDDNKKDEAPNSQETKPAA* # PASA_UPDATE: g3739.t1, single gene model update, valid-1, status:[pasa:asmbl_5261,status:12], valid-1 NODE_2930_length_4714_cov_84.0282 . gene 95 1921 . + . ID=g3739;Name=g3739.t1 NODE_2930_length_4714_cov_84.0282 . mRNA 95 1921 . + . ID=g3739.t1;Parent=g3739;Name=g3739.t1 NODE_2930_length_4714_cov_84.0282 . exon 95 1921 . + . ID=g3739.t1.exon1;Parent=g3739.t1 NODE_2930_length_4714_cov_84.0282 . CDS 95 1297 . + 0 ID=cds.g3739.t1;Parent=g3739.t1;5_prime_partial=true NODE_2930_length_4714_cov_84.0282 . three_prime_UTR 1298 1921 . + . ID=g3739.t1.utr3p1;Parent=g3739.t1 #PROT g3739.t1 g3739 AQELLATIRFCESDAPMSFFETTIRHLGGLLSAYELSREHFYLEKAIELADCLLPAFNTKTGIPYHTIVLKTGVGKNPTWSGGSSLLAEAGSVQLEFKYLSAVSGNQKYARAAERALDAIAGASRRIPGLYPLYISPESGSFTNDHVSFGAMGDSFYEYLLKQQLLFPSSEGGRAGKYRRMYDEAVAAMEEHLVGRSHPRGLTFIGEMKGSGQYNLMDHLACYVPGMLALGAQPFAVEFISPNAAKDKMDKQMTLAKDIAETCATLYADQPSGLGPESVRFNEKDSNSGDYKIEQRKYMLRPEAIESMFILYRVTGDEKYREQAWAVFKAIERHCRTASAFSGVSDVTASKPEHDNSMQSFFMAETLKYLYLIFGSNDDLPLNEYVFTTEAHPLGVIGMH* # ORIGINAL: g3740.t1 original gene structure, not modified by PASA NODE_2930_length_4714_cov_84.0282 AUGUSTUS gene 2998 4460 . - . ID=g3740;Name=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS mRNA 2998 4460 . - . ID=g3740.t1;Parent=g3740;Name=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS exon 4442 4460 . - . ID=g3740.t1.exon1;Parent=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS CDS 4442 4460 . - 0 ID=cds.g3740.t1;Parent=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS exon 4108 4254 . - . ID=g3740.t1.exon2;Parent=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS CDS 4108 4254 . - 2 ID=cds.g3740.t1;Parent=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS exon 2998 3995 . - . ID=g3740.t1.exon3;Parent=g3740.t1 NODE_2930_length_4714_cov_84.0282 AUGUSTUS CDS 2998 3995 . - 2 ID=cds.g3740.t1;Parent=g3740.t1 #PROT g3740.t1 g3740 MLQHRQGDGGADGVSSQGLNGCGPSPYPQIDSFMATKVSTGGVNGYLRRWVYFESAKLLRYDVAFNRWCGNIGRAHKSNHIVVYADLHTMVFYQACRDAECQREGYRSTPQPIPSDLNPFTAPAERERDHDGWMENESALTEDDRLALSAMLAEGEGLADLTREGDVVTDDYEANTLPDDVLCSAVLEDAEADAMETSAMDVSHCTYDIDGALPDDVLLRAADAALISTCDYGVEAVGNDANNDSDAIALVTDTDMYVDDRASAGSGSTRALTSRANRTGRRCHVPDVSDCGRDGDECSANDDAIFALVRDADFAMCVSAATGANCYGEDVGKEERVNPHDDSGFVEDFRNDHSSGAGRCDSSFLSDAIMCAFAETMEQSFAPRIMN* # ORIGINAL: g2869.t1 original gene structure, not modified by PASA NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS gene 21 1600 . - . ID=g2869;Name=g2869.t1 NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS mRNA 21 1600 . - . ID=g2869.t1;Parent=g2869;Name=g2869.t1 NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS exon 870 1600 . - . ID=g2869.t1.exon1;Parent=g2869.t1 NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS CDS 870 1600 . - 0 ID=cds.g2869.t1;Parent=g2869.t1 NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS exon 21 240 . - . ID=g2869.t1.exon2;Parent=g2869.t1 NODE_4368_length_1726_cov_25.2217_potentialcontaminant AUGUSTUS CDS 21 240 . - 1 ID=cds.g2869.t1;Parent=g2869.t1 #PROT g2869.t1 g2869 MYITSVFRELPTEYSKFLQNVASGLTSLRHTSSTDVVEGVNSATEKKTDEENDDAKKTDFEYAMEILKNNRFPAASDRCYIACFRSPVKFSFADMFLFIGNTLLLIQAKDLGDDYKGNKVDAYEKERLKMGATNGEDNVPIQRVKDLKRLWHEATGKEITSVRLCFATSKRNIFSEVCEDMRVNTAQDGVDEANTLADETVYAEPGELPTSTDIFLSAAGVSFLKFDPNRRLQNYVQVTNQSE*YFIMLRRSVARLQATGPNPNPFDSKYLASVKADGKDAKFYKFHELSSKVDSLPFSVRVLLGHGNAGQRGRPE* # PASA_UPDATE: g3556.t1, single gene model update, valid-1, status:[pasa:asmbl_5835,status:12], valid-1 NODE_3285_length_3832_cov_43.0059 . gene 162 1330 . - . ID=g3556;Name=g3556.t1 NODE_3285_length_3832_cov_43.0059 . mRNA 162 1330 . - . ID=g3556.t1;Parent=g3556;Name=g3556.t1 NODE_3285_length_3832_cov_43.0059 . exon 162 1330 . - . ID=g3556.t1.exon1;Parent=g3556.t1 NODE_3285_length_3832_cov_43.0059 . CDS 162 1330 . - 0 ID=cds.g3556.t1;Parent=g3556.t1;3_prime_partial=true #PROT g3556.t1 g3556 MQRRSKRKRDTPSTECDPPGPNERSLPKKSSNRSVKDSPYSDDECVDTCDIEGDGDGESNERYDGCRDAQGRRHGRGTVTWGDGETVFEGRFLNGLREGIGKLVFADGSILSGRWKDDELEGRAVYVNGDGGVLDAQYHKGNLHGQVEERDADGFVTFRGHSYQGNRVGIGAFFFRDGGLIIGTMDRNGKPHGRRVAYVYPGHTHALYGHWSHGNMKAARFATCVKKNGHTDEDASSASPRKNKSAGDKTEHTPAGNPRGRCTTRADVSREAVRSHVFTGCMPSFLFDIVESQYNLVYRSDPSTFDCISSDPLLADPFESLCVRVGASLIDGAGEGLFAKRDFGADELVSIYGGIRLLHSKSDTRDWALNGNVMSVDDEICVDVPSPYD # ORIGINAL: g3557.t1 original gene structure, not modified by PASA NODE_3285_length_3832_cov_43.0059 AUGUSTUS gene 1713 3720 . + . ID=g3557;Name=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS mRNA 1713 3720 . + . ID=g3557.t1;Parent=g3557;Name=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS exon 1713 1897 . + . ID=g3557.t1.exon1;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS CDS 1713 1897 . + 0 ID=cds.g3557.t1;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS exon 2127 2887 . + . ID=g3557.t1.exon2;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS CDS 2127 2887 . + 1 ID=cds.g3557.t1;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS exon 3133 3206 . + . ID=g3557.t1.exon3;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS CDS 3133 3206 . + 2 ID=cds.g3557.t1;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS exon 3584 3720 . + . ID=g3557.t1.exon4;Parent=g3557.t1 NODE_3285_length_3832_cov_43.0059 AUGUSTUS CDS 3584 3720 . + 0 ID=cds.g3557.t1;Parent=g3557.t1 #PROT g3557.t1 g3557 MADSGSPSSVEGGIHKKTPLLERIKSALRIKRDSNERDSTDNQPVVAQRRKSFGDGIVVATPEGKSRSRSSTFSTYSSTKQKGSQTRRPSTQSQQSQESTVTTRPVIITADQVTTLSSHSKRSAKRPSGQYVFVDSTPAWRPPTTYAAMASLDGLPADVLLDIFSMLDWRDLLAVQSSCRRLRSVASEVENYLWRHHCFERGYGFVSLEWDDSVVDSESVVGEGATSVATATGPPSANNPPNVSSGARVTSGKGSVLEQLSGLGGKAPPRQSVMQDVPLTACVCEEQEGPRGSRVRTHTWREVFARYYRELEQKRALEWCQYAANLDSDNPELLESLYCEARMQVLQGETVPLSVDGAIALAALQCQSEVGDYTEEDHRALAASK # ORIGINAL: g11147.t1 original gene structure, not modified by PASA NODE_4813_length_1231_cov_45.8867 AUGUSTUS gene 114 1069 . - . ID=g11147;Name=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS mRNA 114 1069 . - . ID=g11147.t1;Parent=g11147;Name=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS exon 936 1069 . - . ID=g11147.t1.exon1;Parent=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS CDS 936 1069 . - 0 ID=cds.g11147.t1;Parent=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS exon 484 774 . - . ID=g11147.t1.exon2;Parent=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS CDS 484 774 . - 1 ID=cds.g11147.t1;Parent=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS exon 114 267 . - . ID=g11147.t1.exon3;Parent=g11147.t1 NODE_4813_length_1231_cov_45.8867 AUGUSTUS CDS 114 267 . - 1 ID=cds.g11147.t1;Parent=g11147.t1 #PROT g11147.t1 g11147 MVPAAAKRAVAMQSAAQTGMDGGMFLFGDYAGLSLKPDHVSRPIWISPDGNIFLETFSPVYRQAYDFLIAIAEPVCRPHLIHEYRLTPYSLYAAVSVGLETDDIIDVLKRLSKVELPEGIEEFIRLCTTSYGKVKIVLKQNRYYVESNFPEVLERLLEDDTIRAARMEVPAGGAEGLLSSDAPRRGDLMVCN* # PASA_UPDATE: g12249.t1, single gene model update, valid-1, status:[pasa:asmbl_8329,status:12], valid-1 NODE_5886_length_688_cov_36.9021 . gene 136 526 . + . ID=g12249;Name=g12249.t1 NODE_5886_length_688_cov_36.9021 . mRNA 136 526 . + . ID=g12249.t1;Parent=g12249;Name=g12249.t1 NODE_5886_length_688_cov_36.9021 . five_prime_UTR 136 137 . + . ID=g12249.t1.utr5p1;Parent=g12249.t1 NODE_5886_length_688_cov_36.9021 . exon 136 240 . + . ID=g12249.t1.exon1;Parent=g12249.t1 NODE_5886_length_688_cov_36.9021 . CDS 138 240 . + 0 ID=cds.g12249.t1;Parent=g12249.t1;5_prime_partial=true NODE_5886_length_688_cov_36.9021 . exon 398 526 . + . ID=g12249.t1.exon2;Parent=g12249.t1 NODE_5886_length_688_cov_36.9021 . CDS 398 526 . + 2 ID=cds.g12249.t1;Parent=g12249.t1;3_prime_partial=true #PROT g12249.t1 g12249 VAKLYGYWIGVNYRESYDMYVCNGILFNHESPRRGETFVTRKISRSVAQIQLGLIEEFALGNMDAMRDWGHAKDYVE # PASA_UPDATE: g10913.t1, single gene model update, valid-1, status:[pasa:asmbl_3500,status:12],[pasa:asmbl_3503,status:12], valid-1 # ORIGINAL: g10913.t2 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 . gene 1474 4724 . + . ID=g10913;Name=g10913.t2 NODE_209_length_31521_cov_43.1961 . mRNA 1474 4724 . + . ID=g10913.t1;Parent=g10913;Name=g10913.t2 NODE_209_length_31521_cov_43.1961 . five_prime_UTR 1474 1540 . + . ID=g10913.t1.utr5p1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 1474 1608 . + . ID=g10913.t1.exon1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 1541 1608 . + 0 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 2133 2338 . + . ID=g10913.t1.exon2;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 2133 2338 . + 1 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 2489 2575 . + . ID=g10913.t1.exon3;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 2489 2575 . + 2 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 2894 3157 . + . ID=g10913.t1.exon4;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 2894 3157 . + 2 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 3582 4051 . + . ID=g10913.t1.exon5;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 3582 4051 . + 2 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . exon 4230 4724 . + . ID=g10913.t1.exon6;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . CDS 4230 4430 . + 0 ID=cds.g10913.t1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 4431 4724 . + . ID=g10913.t1.utr3p1;Parent=g10913.t1 NODE_209_length_31521_cov_43.1961 . mRNA 1541 4724 . + . ID=g10913.t2;Parent=g10913;Name=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 1541 1608 . + . ID=g10913.t2.exon1;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 1541 1608 . + 0 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 2133 2338 . + . ID=g10913.t2.exon2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 2133 2338 . + 2 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 2489 2575 . + . ID=g10913.t2.exon3;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 2489 2575 . + 1 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 2891 3157 . + . ID=g10913.t2.exon4;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 2891 3157 . + 1 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 3582 4051 . + . ID=g10913.t2.exon5;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 3582 4051 . + 1 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . exon 4230 4724 . + . ID=g10913.t2.exon6;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . CDS 4230 4430 . + 0 ID=cds.g10913.t2;Parent=g10913.t2 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 4431 4724 . + . ID=g10913.t2.utr3p1;Parent=g10913.t2 #PROT g10913.t1 g10913 MNFGDAPQPVNGPIKVPLKHKDKTKNVAIWINDTNAEEISDVCKAAFGVPSAAEIVGLADEETNTVHPYSRLLKSPQIFTGGTNTILLKRKGVIYSDGGYVDADGIQKIDIVKKHKVEKEGERKNETLSQKLKRKLTSKDFVRAFMAEFVATMLFVIIGCGGALASQATTDPIRLDSGRLLAISLLFGIAITVLVYSTAHLSGGHINPAVTIAAMVFGKIGKISAISYVVMQVLGGIFGALILKGLLPVPLQGHLAANSLASGSYVTTTTVMLANGTEATELTRVLWKVEPAQGFFIEFVFTALLVFVVFGTAIDPKADNPKGRSGNFAPLAIGLSIFLAHIFAIPFTNCGINPARSFGPSVVSGYWKNHWVFWIGPILGGIFGALVYTLLFMYEGKDEKDEKERKKVSEAFKEKLLSRIGEDEEMELMSS* #PROT g10913.t2 g10913 MNFGDAPQPVNGPIKVPLKHKDKTKNVAIWINDTNAEEISDVCKAAFGVPSAAEIVGLADEETNTVHPYSRLLKSPQIFTGGTNTILLKRKGVIYSDGGYVDADGIQKIDIVKKHKVEKEAGERKNETLSQKLKRKLTSKDFVRAFMAEFVATMLFVIIGCGGALASQATTDPIRLDSGRLLAISLLFGIAITVLVYSTAHLSGGHINPAVTIAAMVFGKIGKISAISYVVMQVLGGIFGALILKGLLPVPLQGHLAANSLASGSYVTTTTVMLANGTEATELTRVLWKVEPAQGFFIEFVFTALLVFVVFGTAIDPKADNPKGRSGNFAPLAIGLSIFLAHIFAIPFTNCGINPARSFGPSVVSGYWKNHWVFWIGPILGGIFGALVYTLLFMYEGKDEKDEKERKKVSEAFKEKLLSRIGEDEEMELMSS* # ORIGINAL: g10922.t1 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 AUGUSTUS gene 27558 31115 . - . ID=g10922;Name=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS mRNA 27558 31115 . - . ID=g10922.t1;Parent=g10922;Name=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 30926 31115 . - . ID=g10922.t1.exon1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 30926 31115 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 30739 30832 . - . ID=g10922.t1.exon2;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 30739 30832 . - 2 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 30526 30604 . - . ID=g10922.t1.exon3;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 30526 30604 . - 1 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 30320 30442 . - . ID=g10922.t1.exon4;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 30320 30442 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 30138 30236 . - . ID=g10922.t1.exon5;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 30138 30236 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 29924 30047 . - . ID=g10922.t1.exon6;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 29924 30047 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 29297 29400 . - . ID=g10922.t1.exon7;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 29297 29400 . - 2 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 28888 29064 . - . ID=g10922.t1.exon8;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 28888 29064 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 28601 28753 . - . ID=g10922.t1.exon9;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 28601 28753 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 28460 28514 . - . ID=g10922.t1.exon10;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 28460 28514 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 28171 28331 . - . ID=g10922.t1.exon11;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 28171 28331 . - 2 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 27814 27889 . - . ID=g10922.t1.exon12;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 27814 27889 . - 0 ID=cds.g10922.t1;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 27558 27727 . - . ID=g10922.t1.exon13;Parent=g10922.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 27558 27727 . - 2 ID=cds.g10922.t1;Parent=g10922.t1 #PROT g10922.t1 g10922 MRVSVLRLASLRPLRGQLRANLRPIAAALLVPVPIPYRMGATMCHRTTTAALPTARPFVAARAVGSLARTHTCGALRIENVGEAVVLCGWLQQSRRVSSTLLFVPLRDAFGSTQLTVVVDENAHNVSERQRVMLTTLSSLTHDSVVRVTGTVRQRPLNMANKDMPTGSIEVVVESVDVLNRCFDLPFSTADKADNSLREELRLRYRYIDLRRPAMQGNIRMRSAVGSAVRKCLDRHAVTEDVVVAAWGAAGKPLDQMPPFPRLRYAEAMEMIADVTAPMASAVLAGVFGTPPAGHDRVRGFALPPRPSGYSRGDIESLEQLLSSDLAMRAPVTVAHVTSRGSWRSRLDKRLASEDKRAVEDATCAMEGGVIVLCHGDDNVTSPTLGKARLLSADWCESKGLRLRDPNLHAFLWVEDFPLFEPAENGIGLQAVHHPFTAPHDEDASKLFTDPLAVDPDTFRHLLDALSMGAPPHGGLALGFDRMMAVLCGLPSIRDVIAFPKSRSGADLNVNAPAEVSAGDLAQYGLQHVTPAKH* # PASA_UPDATE: g10914.t1, single gene model update, valid-1, status:[pasa:asmbl_3496,status:3], valid-1 NODE_209_length_31521_cov_43.1961 . gene 4751 6821 . - . ID=g10914;Name=g10914.t1 NODE_209_length_31521_cov_43.1961 . mRNA 4751 6821 . - . ID=g10914.t1;Parent=g10914;Name=g10914.t1 NODE_209_length_31521_cov_43.1961 . five_prime_UTR 6713 6821 . - . ID=g10914.t1.utr5p1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 6689 6821 . - . ID=g10914.t1.exon1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 6689 6712 . - 0 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 6533 6566 . - . ID=g10914.t1.exon2;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 6533 6566 . - 0 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 6326 6397 . - . ID=g10914.t1.exon3;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 6326 6397 . - 2 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 6013 6131 . - . ID=g10914.t1.exon4;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 6013 6131 . - 2 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 5809 5890 . - . ID=g10914.t1.exon5;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 5809 5890 . - 0 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 5424 5695 . - . ID=g10914.t1.exon6;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 5424 5695 . - 2 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 5181 5247 . - . ID=g10914.t1.exon7;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 5181 5247 . - 0 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . exon 4751 5029 . - . ID=g10914.t1.exon8;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . CDS 4812 5029 . - 2 ID=cds.g10914.t1;Parent=g10914.t1 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 4751 4811 . - . ID=g10914.t1.utr3p1;Parent=g10914.t1 #PROT g10914.t1 g10914 MSDTHGSTGVPSETALEFIDYSAQSAKASSVSGSIRPAQEEDDETPVFNDTQTLLPTGANEKYGPPLWSIDYYRKYFDVGSAQVGRRILKSVWPFHRDFLDSISSSPDMYGPFWIATTLIFAAAMTGNLSSYLASFRLGTEDWRYDFSKVTFAASAIYGYATLVPVVVWAILRYVAKARTVGLMEVICIYGYSLFIYIPVSILCIVHNEALRWSLVYVGMVISGSVLVINFYPFVARLEGWPRYGLPALVFVLHGGLATAFKFYFFEYAPVLAAQAIAPDAAPTASPTPTPTLNS* # PASA_UPDATE: g10921.t1, single gene model update, valid-1, status:[pasa:asmbl_3498,status:12], valid-1 NODE_209_length_31521_cov_43.1961 . gene 25153 27252 . - . ID=g10921;Name=g10921.t1 NODE_209_length_31521_cov_43.1961 . mRNA 25153 27252 . - . ID=g10921.t1;Parent=g10921;Name=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 27080 27252 . - . ID=g10921.t1.exon1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 27080 27252 . - 0 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 26835 26998 . - . ID=g10921.t1.exon2;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 26835 26998 . - 1 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 26644 26757 . - . ID=g10921.t1.exon3;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 26644 26757 . - 2 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 26264 26503 . - . ID=g10921.t1.exon4;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 26264 26503 . - 2 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 25947 26160 . - . ID=g10921.t1.exon5;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 25947 26160 . - 2 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 25768 25855 . - . ID=g10921.t1.exon6;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 25768 25855 . - 1 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 25530 25663 . - . ID=g10921.t1.exon7;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 25530 25663 . - 0 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . exon 25153 25409 . - . ID=g10921.t1.exon8;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . CDS 25256 25409 . - 1 ID=cds.g10921.t1;Parent=g10921.t1 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 25153 25255 . - . ID=g10921.t1.utr3p1;Parent=g10921.t1 #PROT g10921.t1 g10921 MNYDAVSHTGSHLSADLSADFSGIGSVDHDDSVSVASYRSRSVSVASQTTGQLSELDKARKEHFDLLGASRLRKYAHAFSNTGAFSTFILVIIFINTILIALQTTASLTRAAGWYFNLIDGVFLGIYIFEMVIKLYASRLHYFNSAWNRFDCLIVFASILDLVLPLAVSVSAFDPKIFRLLRIFRAVRAIRALRVLRTIKFLKSLQVIVTTLFKSIPALGNISMLIGLVLYVFAVIGRSLYGTLDPGRWGDMGRACFTLFQLMTMDDWFFMYSDVADEDSSRAHIFAFLSLFIVIETLIFINLFVAVIVDNLQQSQERQNAHKKRRPRIGRSSMNIPGDLEFNLLVKRAEEFVPGNYDNTLMDLNSYYPDKRITKRDKELFAHYLRLLAAMDYTAEQLEERQALLDSLTDMANPRSEKDAADDGGR* # PASA_UPDATE: g10920.t1, single gene model update, valid-1, status:[pasa:asmbl_3505,status:3], valid-1 NODE_209_length_31521_cov_43.1961 . gene 23723 25175 . + . ID=g10920;Name=g10920.t1 NODE_209_length_31521_cov_43.1961 . mRNA 23723 25175 . + . ID=g10920.t1;Parent=g10920;Name=g10920.t1 NODE_209_length_31521_cov_43.1961 . five_prime_UTR 23723 23821 . + . ID=g10920.t1.utr5p1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . exon 23723 24048 . + . ID=g10920.t1.exon1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . CDS 23822 24048 . + 0 ID=cds.g10920.t1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . exon 24200 24347 . + . ID=g10920.t1.exon2;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . CDS 24200 24347 . + 1 ID=cds.g10920.t1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . exon 24451 24583 . + . ID=g10920.t1.exon3;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . CDS 24451 24583 . + 0 ID=cds.g10920.t1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . exon 24676 24822 . + . ID=g10920.t1.exon4;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . CDS 24676 24822 . + 2 ID=cds.g10920.t1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . exon 24912 25175 . + . ID=g10920.t1.exon5;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . CDS 24912 25072 . + 2 ID=cds.g10920.t1;Parent=g10920.t1 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 25073 25175 . + . ID=g10920.t1.utr3p1;Parent=g10920.t1 #PROT g10920.t1 g10920 MDGDDVHVSIEYVSSSGAVLSVEHKAALETSLVILRDTQKAHRVKFWGKVVTTHNDYFVAESLGKDELAERKSFYSRDCVGWVQLPEVDSILKEVCSSIRGRFTGDPSFEHRLPAAPTADGTEGEELIVTEEKRLAALVVRINQAVSIVPRGAFIKTPTGVVEPNRNFGGLSVSAAAKLSSYFHFREAINLKKKSLLQREHLEKSIDFLDPIDEDIPKESWSLQFEKGSGLVTLRSLLWPGFTFYHVPNTSRFGYVYFGIGESNYDLGFMF* # ORIGINAL: g10918.t1 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 AUGUSTUS gene 17111 18448 . - . ID=g10918;Name=g10918.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS mRNA 17111 18448 . - . ID=g10918.t1;Parent=g10918;Name=g10918.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 17111 18448 . - . ID=g10918.t1.exon1;Parent=g10918.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 17111 18448 . - 0 ID=cds.g10918.t1;Parent=g10918.t1 #PROT g10918.t1 g10918 MGSTPQHTTAMSVSVAPAASAAAESLPAISTPVLPDLVAAALGNETRINDVIPFSSLTPAHLLPASIQTTLTIALTVFYALMGLFTLFQLARIVYYRHKKLSYQSMFLSLCFLWAVLRTVLFGLTLITNWSLAVYRFIYCVPITLQFATFSLLVLYFAQVVHKTKWQLASKALYKRILLSTWMLSNVAFFSVNITCVAIVGNRATFPKSIAIARVAVNETLFLLLSAALVVYMFRVMKLSSASVLLQAKGTSLRQVVLLMALMAVLFTSRAVYNIVAVATNLTSFVVGNPRHGSAADHFDFDDNKTYSYAFLCASLFLWEILPTFAMVWFFRVKKPRLTQADTLHPAVNPDLPDGGARTYFFDNPKRYESDSEDGDTVHPLVYNSNPYDIPASLPYGLYHQGTPPYHGGGAYGSLARSHSHSYSSSSRGRPGSSHGQSYRSSTDK* # ORIGINAL: g10915.t1 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 AUGUSTUS gene 7118 10996 . + . ID=g10915;Name=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS mRNA 7118 10996 . + . ID=g10915.t1;Parent=g10915;Name=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 7118 7220 . + . ID=g10915.t1.exon1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 7118 7220 . + 0 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 7355 7468 . + . ID=g10915.t1.exon2;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 7355 7468 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 7565 7686 . + . ID=g10915.t1.exon3;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 7565 7686 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 8018 8111 . + . ID=g10915.t1.exon4;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 8018 8111 . + 0 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 8958 8966 . + . ID=g10915.t1.exon5;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 8958 8966 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 9076 9271 . + . ID=g10915.t1.exon6;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 9076 9271 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 9380 9494 . + . ID=g10915.t1.exon7;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 9380 9494 . + 1 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 9589 9629 . + . ID=g10915.t1.exon8;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 9589 9629 . + 0 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 9713 9830 . + . ID=g10915.t1.exon9;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 9713 9830 . + 1 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 9952 10036 . + . ID=g10915.t1.exon10;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 9952 10036 . + 0 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 10219 10347 . + . ID=g10915.t1.exon11;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 10219 10347 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 10505 10615 . + . ID=g10915.t1.exon12;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 10505 10615 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 10746 10996 . + . ID=g10915.t1.exon13;Parent=g10915.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 10746 10996 . + 2 ID=cds.g10915.t1;Parent=g10915.t1 #PROT g10915.t1 g10915 MYERADKRDCNQLRPMATEQALLNKCDGSCRYSQGDTAVIVGVYGPVEVKPSKEIIDKATVEVLFKPKTGRPGVADKLLEHLIRLTVEPMVLRAMHPRTSISINIQVVNDAGSVANSVFTLAFDGTSDDVLTSHTSGSFTTDEVGDEGHSSIFVARITRMDRERSSAGAVGDMPGRSAADRQSALLDLVDDAFLARKPLCTAALIVAVHGVFWHFATTERTVLSSVSYSMLVIASMRACTHNSACGGHISKVVSHVARYGGSCDSSYHAPVVAPMATEATAAVVLLLRRVWNGAVHLRTTQPSEFAKYTVVLLLSIGFVGSLVSGRLLLYIVVVVLMCVPAARHYDVIQYVGNHPKARAFSERMRAMLDAVVAHDDVDNSDIFGCDGALAVNPFELDDSIMEGSFMRTLASQGLDDSDAVAVTPARYSDMFVDVDAPGTPTFNASPSLVAFGSMSELSQLTSHPHEAHARHLLLDENSDDVDLSEYAVIDKNRLG* # ORIGINAL: g10916.t1 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 AUGUSTUS gene 11474 13322 . + . ID=g10916;Name=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS mRNA 11474 13322 . + . ID=g10916.t1;Parent=g10916;Name=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 11474 11819 . + . ID=g10916.t1.exon1;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 11474 11819 . + 0 ID=cds.g10916.t1;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 11954 12026 . + . ID=g10916.t1.exon2;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 11954 12026 . + 2 ID=cds.g10916.t1;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 12132 12225 . + . ID=g10916.t1.exon3;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 12132 12225 . + 1 ID=cds.g10916.t1;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 12343 12461 . + . ID=g10916.t1.exon4;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 12343 12461 . + 0 ID=cds.g10916.t1;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 12821 13322 . + . ID=g10916.t1.exon5;Parent=g10916.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 12821 13322 . + 1 ID=cds.g10916.t1;Parent=g10916.t1 #PROT g10916.t1 g10916 MGKEILLYYHPTMEPLARKIANICAEIEEEDGDDDLASIIHQRARGEARRPPSAGGLTQEPGLHGVNTPARRKRTASSVFGHRHVVLRGDLRWEYFEDGFPNLFIDNVKSMAGHDVIFLASFHHTSIIFEQLSVIYSFPRYLARSFTLILPYFPTGTMERVDIEGQVVTAKSLATMLSSIPLTTQGPPQILIYDIHALQERFYFSDQVIPRLESAIPLLIARMHELPDAKLTSVAFPDEGAHKRFHTLFDESSWPTIICTKVRDADRRIVTVKEGDVAGRHVVIVDDLVKTGGTLLECAKALMERGATAVSFFVTHAMFPMESWRRFIDKGFRHFWFTDSCPHSVAAIGDTKPFELLSLAPAVAEALAGYDLRRYHV* # PASA_UPDATE: g10919.t1, single gene model update, valid-1, status:[pasa:asmbl_3497,status:12], valid-1 NODE_209_length_31521_cov_43.1961 . gene 18796 23372 . - . ID=g10919;Name=g10919.t1 NODE_209_length_31521_cov_43.1961 . mRNA 18796 23372 . - . ID=g10919.t1;Parent=g10919;Name=g10919.t1 NODE_209_length_31521_cov_43.1961 . five_prime_UTR 23284 23372 . - . ID=g10919.t1.utr5p1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 23233 23372 . - . ID=g10919.t1.exon1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 23233 23283 . - 0 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 22971 23156 . - . ID=g10919.t1.exon2;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 22971 23156 . - 0 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 22532 22864 . - . ID=g10919.t1.exon3;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 22532 22864 . - 0 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 22153 22448 . - . ID=g10919.t1.exon4;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 22153 22448 . - 0 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 21957 22068 . - . ID=g10919.t1.exon5;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 21957 22068 . - 1 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 21798 21865 . - . ID=g10919.t1.exon6;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 21798 21865 . - 0 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 21552 21688 . - . ID=g10919.t1.exon7;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 21552 21688 . - 1 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 21146 21376 . - . ID=g10919.t1.exon8;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 21146 21376 . - 2 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 20983 21043 . - . ID=g10919.t1.exon9;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 20983 21043 . - 2 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 20545 20849 . - . ID=g10919.t1.exon10;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 20545 20849 . - 1 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 19983 20316 . - . ID=g10919.t1.exon11;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 19983 20316 . - 2 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . exon 18796 19801 . - . ID=g10919.t1.exon12;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . CDS 18865 19801 . - 1 ID=cds.g10919.t1;Parent=g10919.t1 NODE_209_length_31521_cov_43.1961 . three_prime_UTR 18796 18864 . - . ID=g10919.t1.utr3p1;Parent=g10919.t1 #PROT g10919.t1 g10919 MSAENVKVAVRVRPFNQREKDANSSCIISMEGDTTFIEDPNNRGDPKKFAFDYSYWSHDGFESNKDGIFTPTVKHYADQRRVFDDLGRGVLDNAWQGYNATLFAYGQTGSGKSYSMLGYGPNKGIVPITCDELFKAIGENKDADKQFQVTFSMIEIYNEQVRDLLNSKSAKGGLKVRQHPKLGFFVDELKVVAVKNYDEIERWMEEGTVNRTTASTNMNATSSRSHMVITIKFTQILKEKGKSMTKSSEINLVDLAGSERADATGATGDRLKEGSAINQSLSTLGNVISALADKAMGKKNVLVPYRDSILTKLLMNALGGNSRTIMIAALSPAAINFDETLSTLRYADRAKKIKNMAVVNEDPTERLIRELKEENARLMAMLSGGTSAKGLTPDELAARQAEASEMQEKIAANERQMEEMGRSWEQRLEDARKDWESQAVRGDPRLLTTPYLQNINEDSQLSGVIKHVIDKGEMTAGTAEASATRIQMRGLSLQKDHAVLINNGKTVTINPMGSSRIIVNGQSVTAPRTLQHNDRVLFGSNNLYIFVGFKADREKADRGFVVDWDFCQNEIAAAQGLTRPENLLGDGKDAKSQEIIRVREDLVRLLPMVSEANAMSEELGKGLRFDLVVRSGTAHSLNDDRKEVMVKVASAQTKFVWLWPKGKFVNRKYLMQEMWQQYIETCEQPSVEESKDPFWDPPEDIFLGSAHVYLQSLGYMIDMNESLAVTNYQGHEEGILQVAVACADPKGRELNEESFVEAPKDLLGKRMDLIVKITSGRGVKWVEADGTRSVFCRFKFYADDKLYETPAVGKTMNPDFKFRRQFTVNPVTDAFLRYLEADALVVEVWGKQGDGKGGGAGSATLDTTKRRARAKSNNPATDDSGASSPSTAAEGPEIVRLRERVHALEAEVRELRATGAGPSSQSHSSGSAGNVLSPDGLSADDAALVRAVASFARLSNGMRNEMHACAADKRPDKDQLKHLKEQWDERKKDALAIGKLLEGVVGSLKGDLAALAARKK* # ORIGINAL: g10917.t1 original gene structure, not modified by PASA NODE_209_length_31521_cov_43.1961 AUGUSTUS gene 13937 16743 . + . ID=g10917;Name=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS mRNA 13937 16743 . + . ID=g10917.t1;Parent=g10917;Name=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 13937 14099 . + . ID=g10917.t1.exon1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 13937 14099 . + 0 ID=cds.g10917.t1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 14252 15096 . + . ID=g10917.t1.exon2;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 14252 15096 . + 2 ID=cds.g10917.t1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 15209 15372 . + . ID=g10917.t1.exon3;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 15209 15372 . + 0 ID=cds.g10917.t1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 15506 16274 . + . ID=g10917.t1.exon4;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 15506 16274 . + 1 ID=cds.g10917.t1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 16375 16521 . + . ID=g10917.t1.exon5;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 16375 16521 . + 0 ID=cds.g10917.t1;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS exon 16648 16743 . + . ID=g10917.t1.exon6;Parent=g10917.t1 NODE_209_length_31521_cov_43.1961 AUGUSTUS CDS 16648 16743 . + 0 ID=cds.g10917.t1;Parent=g10917.t1 #PROT g10917.t1 g10917 MMGMGMGMGMGAQAPAAHMMAPPGAPGMRPPMAMMPMGRPPFPPGQLPLGAGIRGPSLLPVPGPGQARPPGTAASPSASKAPAQVATVFVGNITERVTDVIIKQLLSTCGNVLNWKRVTGASGRLQAFGFCEYETPAMALRSLRLLSGVRLGDRDLLLKVDEKTRKALDDFEAAEAAAGGEAVASVELRGAADDARIAEDIRLVLEGSGVNDEIRAVTQAGAMAAATVAAAAAAGEGADRSEAVEDDEDIRQRLILRELVTFRDGYGKRGADKDPVKERPPSERAGDRDRDRGRDRDRDRERDRERDDGRDRRDRDKERDGDRGGRSRDSEGALKERERKWEPRERERLRTMDRHAERDAAAARDREREREKMELFLASYDDDTMDEKYYSSIELFTVRRGSALSRLVRDREREADSDRREFERELAETSMAAGASNEALPSAPIAPDASEGLQAVVNGATAPAHGVSADLSGERPSVESPTPTPGASVDAEMAGVGDDASDVSETTLGLVAASRAQPLRQLTFGKTPTGAVSRARALSASGAPAPMANAPALSSAASAKRTAAVFAEDEDEAEQNEAKRRRLQLLAQQQRVLARNDGGDGATATSGGGALVDAEARKKAAQALIARIPTEQADLFAYKVDWGQADATLIEGRLKTWIGKKITEYLGAEQQTLTTYIAGKLRDATAPALLVKDIAEILGEKDAQVFVAKLWRVLVYETEARKAGLSE* # ORIGINAL: g2846.t1 original gene structure, not modified by PASA NODE_6340_length_589_cov_128.185_potentialcontaminant AUGUSTUS gene 171 498 . - . ID=g2846;Name=g2846.t1 NODE_6340_length_589_cov_128.185_potentialcontaminant AUGUSTUS mRNA 171 498 . - . ID=g2846.t1;Parent=g2846;Name=g2846.t1 NODE_6340_length_589_cov_128.185_potentialcontaminant AUGUSTUS exon 171 498 . - . ID=g2846.t1.exon1;Parent=g2846.t1 NODE_6340_length_589_cov_128.185_potentialcontaminant AUGUSTUS CDS 171 498 . - 0 ID=cds.g2846.t1;Parent=g2846.t1 #PROT g2846.t1 g2846 MASGSFGKIAKEWRLKTGLTTEFEEAPIDFNELSAVGRKGALEAYTEIWGKSITGGTATLRAEKAEAVKRYVDRMIKERGPASYDPLALNKSPDFVQELEKEWSDIVGV # PASA_UPDATE: g1493.t1, single gene model update, valid-1, status:[pasa:asmbl_330,status:12], valid-1 NODE_1088_length_14047_cov_54.0779 . gene 9456 11121 . + . ID=g1493;Name=g1493.t1 NODE_1088_length_14047_cov_54.0779 . mRNA 9456 11121 . + . ID=g1493.t1;Parent=g1493;Name=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 9456 9502 . + . ID=g1493.t1.exon1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 9456 9502 . + 0 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 9590 9658 . + . ID=g1493.t1.exon2;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 9590 9658 . + 1 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 9768 9846 . + . ID=g1493.t1.exon3;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 9768 9846 . + 1 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 10012 10123 . + . ID=g1493.t1.exon4;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 10012 10123 . + 0 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 10328 10459 . + . ID=g1493.t1.exon5;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 10328 10459 . + 2 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . exon 10822 11121 . + . ID=g1493.t1.exon6;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . CDS 10822 10868 . + 2 ID=cds.g1493.t1;Parent=g1493.t1 NODE_1088_length_14047_cov_54.0779 . three_prime_UTR 10869 11121 . + . ID=g1493.t1.utr3p1;Parent=g1493.t1 #PROT g1493.t1 g1493 MEYTGSNYVGERKNGRLEGVGEYAFPTGTKYKGHLKDGQFHGHGVLHFANGGRFEAEWDEGVATGGSYTYADGLQYEEKEWDYCTEDDRRFYSERINGLKPAGQSQLTNAGQSQKIPVGTYDCGDGYFDAKEGKIYAYGGGFLRNPEEGEASWIIKTCRRS* # ORIGINAL: g1491.t1 original gene structure, not modified by PASA NODE_1088_length_14047_cov_54.0779 AUGUSTUS gene 3860 6288 . + . ID=g1491;Name=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS mRNA 3860 6288 . + . ID=g1491.t1;Parent=g1491;Name=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 3860 3995 . + . ID=g1491.t1.exon1;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 3860 3995 . + 0 ID=cds.g1491.t1;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 4120 4928 . + . ID=g1491.t1.exon2;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 4120 4928 . + 2 ID=cds.g1491.t1;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 5166 5366 . + . ID=g1491.t1.exon3;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 5166 5366 . + 0 ID=cds.g1491.t1;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 5509 5663 . + . ID=g1491.t1.exon4;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 5509 5663 . + 0 ID=cds.g1491.t1;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 5937 6288 . + . ID=g1491.t1.exon5;Parent=g1491.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 5937 6288 . + 1 ID=cds.g1491.t1;Parent=g1491.t1 #PROT g1491.t1 g1491 MPPNPPAVAKEGERSVSTAASAATPCKSSPGAGFDAAKFDNVFANDLRQRDGTPKEALGAFLRAVSTVLSDYVLGCTDRSKPVVNFKEPSELADIMHLGISSRPSPLSAILADIDDAIKYSVQTQHPRFYNQLFAGTDVVALVGEWVTCALNASMYTYEVAPAFTLVESTVLAKMRAISGLPVETGDGIFSPGGSVSNLYAMQAARHKACPETKKRGLAAAPNLVAFASTQCHYSVQKAAAILGFGTDAVIAVECDAKGRMDPFDLEKKMAAAENEGLRPFFVNATSGTTVLGAFDPLDAIADICERHEAWMHVDGAWGGSVLLSSRHRALMTGISRADSLTWNPHKMLGVPLQCSAVLLREDGILKACNSMKAQYLFQTDKKNGEFDTGDKALQCGRKVDAFKLWLAWKARGDDGYAAIVDAAFDRAAYLVESLRRRVGTDATGGFRLVVDRPQFTNVCFWYEPAHIRCLPDTYERRVALHTVAPLIKARMQARGTAMVGFQPLGDMPNFFRMVISNPNVTNGDMDALLDEIDEIGRELPPPRTVSGSV* # ORIGINAL: g1494.t1 original gene structure, not modified by PASA NODE_1088_length_14047_cov_54.0779 AUGUSTUS gene 11449 13410 . - . ID=g1494;Name=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS mRNA 11449 13410 . - . ID=g1494.t1;Parent=g1494;Name=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 13355 13410 . - . ID=g1494.t1.exon1;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 13355 13410 . - 0 ID=cds.g1494.t1;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 13054 13212 . - . ID=g1494.t1.exon2;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 13054 13212 . - 1 ID=cds.g1494.t1;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 12661 12756 . - . ID=g1494.t1.exon3;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 12661 12756 . - 1 ID=cds.g1494.t1;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS exon 11449 12451 . - . ID=g1494.t1.exon4;Parent=g1494.t1 NODE_1088_length_14047_cov_54.0779 AUGUSTUS CDS 11449 12451 . - 1 ID=cds.g1494.t1;Parent=g1494.t1 #PROT g1494.t1 g1494 MGNPEFDNEGRVMRTDHGRFVLFNVYFPNGKRGDDRLKFKMDFYDAFRKKCDELRNAGRHVVVLGDVNTAHRPMDIHDPKRLCKASGFLPIEREWMDKFMEESGFVDSFRHFHPDEANRYTFWDTRTQQRPLNHGWRIDYILVDSQYMRDEAADADILSKVMGSDHCPITLKLKCDAVTRDAKTPLPSLCSKNANAYKTKRETHKQTSVSAFFAKQIASVKSKIEADAEALVEATYVTVPTVANVAPNAIADASNAVVHAALKKEQKQAIVFIIDDAEYVQKVSSDKRDAATAAAVGVVNTVNATDDTQVPTVANVAPNAIADASNAVVHAALKKEQKQAIVFIIDDAEYVQKVSSDKRDAATAAAVGVVNTVNATDDTQVSAEIKQEDVREEVQSGNRSVAPASCSSGTERAAAGTKRSAFDALMPASQPPAKRRK* # PASA_UPDATE: g1490.t1, single gene model update, valid-1, status:[pasa:asmbl_329,status:12], valid-1 NODE_1088_length_14047_cov_54.0779 . gene 102 2804 . + . ID=g1490;Name=g1490.t1 NODE_1088_length_14047_cov_54.0779 . mRNA 102 2804 . + . ID=g1490.t1;Parent=g1490;Name=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 102 314 . + . ID=g1490.t1.exon1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 102 314 . + 0 ID=cds.g1490.t1;Parent=g1490.t1;5_prime_partial=true NODE_1088_length_14047_cov_54.0779 . exon 491 712 . + . ID=g1490.t1.exon2;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 491 712 . + 0 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 1060 1140 . + . ID=g1490.t1.exon3;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 1060 1140 . + 0 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 1376 1510 . + . ID=g1490.t1.exon4;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 1376 1510 . + 0 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 1713 1894 . + . ID=g1490.t1.exon5;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 1713 1894 . + 0 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 2058 2139 . + . ID=g1490.t1.exon6;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 2058 2139 . + 1 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 2348 2454 . + . ID=g1490.t1.exon7;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 2348 2454 . + 0 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . exon 2667 2804 . + . ID=g1490.t1.exon8;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . CDS 2667 2745 . + 1 ID=cds.g1490.t1;Parent=g1490.t1 NODE_1088_length_14047_cov_54.0779 . three_prime_UTR 2746 2804 . + . ID=g1490.t1.utr3p1;Parent=g1490.t1 #PROT g1490.t1 g1490 AHGAFESMPAAALLRKRGIGLGPAYAQFPRTPRPIASGPHHHAMHSAGLGAHSGTPRKMGANSVQQTPNSMAQALFQAGQSVHPAFSTERPARKLIQRALQPDSGVGVGLSPLKTPAGGAIERMGSALRKSDHSHGYSHEDLRLLARLSKILGIKRLLVEQLKALNHDAEQTIALRGVDGITASFQQHYSWVVVQLDEVNRALKPTLMGLRPQPKTEPLGRDSSLQPGGSQFHSILSETSVSRVSAESTHQARSLVNERRAKIAAERVVANKGKAITKGDAVESKESNRLHDLISHCVALVLQIKSCAEPGEGEQMSAAEMASLLDNALSKLRPVSAANVDVFTEIEQAVEFIKGHVMPMDTDAFD* # PASA_UPDATE: g1492.t1, single gene model update, valid-1, status:[pasa:asmbl_328,status:3], valid-1 NODE_1088_length_14047_cov_54.0779 . gene 6720 9017 . - . ID=g1492;Name=g1492.t1 NODE_1088_length_14047_cov_54.0779 . mRNA 6720 9017 . - . ID=g1492.t1;Parent=g1492;Name=g1492.t1 NODE_1088_length_14047_cov_54.0779 . five_prime_UTR 8971 9017 . - . ID=g1492.t1.utr5p1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . exon 8965 9017 . - . ID=g1492.t1.exon1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . CDS 8965 8970 . - 0 ID=cds.g1492.t1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . exon 8477 8585 . - . ID=g1492.t1.exon2;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . CDS 8477 8585 . - 0 ID=cds.g1492.t1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . exon 7850 8125 . - . ID=g1492.t1.exon3;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . CDS 7850 8125 . - 2 ID=cds.g1492.t1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . exon 7243 7331 . - . ID=g1492.t1.exon4;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . CDS 7243 7331 . - 2 ID=cds.g1492.t1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . exon 6720 6908 . - . ID=g1492.t1.exon5;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . CDS 6852 6908 . - 0 ID=cds.g1492.t1;Parent=g1492.t1 NODE_1088_length_14047_cov_54.0779 . three_prime_UTR 6720 6851 . - . ID=g1492.t1.utr3p1;Parent=g1492.t1 #PROT g1492.t1 g1492 MPAYHSNYNELTDVRLLGNMSLLPIKSQFKGPAPSAPRDSKDPDIVDEALLYFKANVFFKNFDIKGPADRVLVYLTLFTSEALGRLVKCNTKNEGLKAMNSLALENFAIPGDKNFPINSLYSSPTDRAQADTMRQYFLQLRQELGVRLVDLVLAGDKQNKWWTCFVKRRFMNKSLDGK* # PASA_UPDATE: g11211.t1, single gene model update, valid-1, status:[pasa:asmbl_4998,status:12], valid-1 NODE_2783_length_5132_cov_41.262 . gene 116 1520 . - . ID=g11211;Name=g11211.t1 NODE_2783_length_5132_cov_41.262 . mRNA 116 1520 . - . ID=g11211.t1;Parent=g11211;Name=g11211.t1 NODE_2783_length_5132_cov_41.262 . five_prime_UTR 1468 1520 . - . ID=g11211.t1.utr5p1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . exon 1369 1520 . - . ID=g11211.t1.exon1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . CDS 1369 1467 . - 0 ID=cds.g11211.t1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . exon 1076 1245 . - . ID=g11211.t1.exon2;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . CDS 1076 1245 . - 0 ID=cds.g11211.t1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . exon 731 935 . - . ID=g11211.t1.exon3;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . CDS 731 935 . - 1 ID=cds.g11211.t1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . exon 477 549 . - . ID=g11211.t1.exon4;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . CDS 477 549 . - 0 ID=cds.g11211.t1;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . exon 116 261 . - . ID=g11211.t1.exon5;Parent=g11211.t1 NODE_2783_length_5132_cov_41.262 . CDS 116 261 . - 2 ID=cds.g11211.t1;Parent=g11211.t1;3_prime_partial=true #PROT g11211.t1 g11211 MHARVLLSSRLSPASAFAARAPIRRMASVSDANVKRTSLYDFHVAKGGKMVPFAGWAMPVQYDDQGLIASHTHTRENASIFDVSHMLQTRLTGKSATAFLEHLTVADVKGIALGQTKLTVFTNEKGGINDDLMITNSGDHYYIVSNAGCADKDLAHMRKHIAQFPDAKLEVLNEQLSLLALQGPRAAIALKTLVDFDLRDFEFMHGREADVAGIKGCRITRCGYTGEDGFE # ORIGINAL: g11213.t1 original gene structure, not modified by PASA NODE_2783_length_5132_cov_41.262 AUGUSTUS gene 4751 4966 . - . ID=g11213;Name=g11213.t1 NODE_2783_length_5132_cov_41.262 AUGUSTUS mRNA 4751 4966 . - . ID=g11213.t1;Parent=g11213;Name=g11213.t1 NODE_2783_length_5132_cov_41.262 AUGUSTUS exon 4751 4966 . - . ID=g11213.t1.exon1;Parent=g11213.t1 NODE_2783_length_5132_cov_41.262 AUGUSTUS CDS 4751 4966 . - 0 ID=cds.g11213.t1;Parent=g11213.t1 #PROT g11213.t1 g11213 MYKCQLDMWVADVKPSPVRLRKAMRGLLRGIEYVHREGIVHRDIKVQNVFVAEDGRPVLGDFDINKSNDDR* # PASA_UPDATE: g11212.t1, single gene model update, valid-1, status:[pasa:asmbl_4999,status:12], valid-1 NODE_2783_length_5132_cov_41.262 . gene 1982 3298 . + . ID=g11212;Name=g11212.t1 NODE_2783_length_5132_cov_41.262 . mRNA 1982 3298 . + . ID=g11212.t1;Parent=g11212;Name=g11212.t1 NODE_2783_length_5132_cov_41.262 . five_prime_UTR 1982 2044 . + . ID=g11212.t1.utr5p1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . exon 1982 2290 . + . ID=g11212.t1.exon1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . CDS 2045 2290 . + 0 ID=cds.g11212.t1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . exon 2489 2675 . + . ID=g11212.t1.exon2;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . CDS 2489 2675 . + 0 ID=cds.g11212.t1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . exon 2800 2966 . + . ID=g11212.t1.exon3;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . CDS 2800 2966 . + 2 ID=cds.g11212.t1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . exon 3104 3298 . + . ID=g11212.t1.exon4;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . CDS 3104 3241 . + 0 ID=cds.g11212.t1;Parent=g11212.t1 NODE_2783_length_5132_cov_41.262 . three_prime_UTR 3242 3298 . + . ID=g11212.t1.utr3p1;Parent=g11212.t1 #PROT g11212.t1 g11212 MSPSISEGTEGRTSLLQTVVIGYSDIALAGCRAILGTELSGGIERGSITLYKDFIKGGRVSVDGEWGTPVRHIELFHVPAKQVSLVAINVIVPDKRATSLAKYILDFVRDNGGKTIVLLSSLHMKLRSAPKDNEVLLKTFFTHPPDAFASLKPFPEDCELSDQLLHAFLALVTVRRTPLVLLACAGHRASRYGESDGSFENISALQDRIRASCGIDISLRLSSMFSPKPDYTEDGDVAEDNRLYL* # PASA_UPDATE: g5192.t1, single gene model update, valid-1, status:[pasa:asmbl_4951,status:3], valid-1 NODE_2760_length_5204_cov_45.2168 . gene 387 2676 . + . ID=g5192;Name=g5192.t1 NODE_2760_length_5204_cov_45.2168 . mRNA 387 2676 . + . ID=g5192.t1;Parent=g5192;Name=g5192.t1 NODE_2760_length_5204_cov_45.2168 . five_prime_UTR 387 562 . + . ID=g5192.t1.utr5p1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 387 688 . + . ID=g5192.t1.exon1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 563 688 . + 0 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 813 945 . + . ID=g5192.t1.exon2;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 813 945 . + 0 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 1054 1183 . + . ID=g5192.t1.exon3;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 1054 1183 . + 2 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 1313 1412 . + . ID=g5192.t1.exon4;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 1313 1412 . + 1 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 1664 1809 . + . ID=g5192.t1.exon5;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 1664 1809 . + 0 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 1938 2105 . + . ID=g5192.t1.exon6;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 1938 2105 . + 1 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 2222 2359 . + . ID=g5192.t1.exon7;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 2222 2359 . + 1 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . exon 2467 2676 . + . ID=g5192.t1.exon8;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . CDS 2467 2647 . + 1 ID=cds.g5192.t1;Parent=g5192.t1 NODE_2760_length_5204_cov_45.2168 . three_prime_UTR 2648 2676 . + . ID=g5192.t1.utr3p1;Parent=g5192.t1 #PROT g5192.t1 g5192 MERDAPVIYGLEFPARALANQRAEAEVTRFLVGTLTLRAENELHMVEFNDEDSSIACQVFSHAAGEVWKISASPAHSDVIATCYVDARSGATCVSASVWRMPSASVRPGAQKQPLEQLCSLDGHSGDVRSVLWHPAGESSRIASIDDSNIRVWDIGTGLKEAKPLSTVSLDAAQQQQQQRLAGGAWSPHQGGSQIAAAAGTDIVGFDLRSGKKSYTIEKADATMVRDIDFNPNKQHTLVSGGDDCRIRFWDVRNPRDPLKLVTHHSHWVWGVRYNHFHDQLVLSASSDGRVILSSILSLSSDPYGHSADDKTASDKEAAAAQDRLLARYDEHEDSVYAAEWSNGDPWTFASLSHDGRLVINRVPREEKYKILL* # PASA_UPDATE: g5193.t1, single gene model update, valid-1, status:[pasa:asmbl_4952,status:12], valid-1 NODE_2760_length_5204_cov_45.2168 . gene 2677 5115 . - . ID=g5193;Name=g5193.t1 NODE_2760_length_5204_cov_45.2168 . mRNA 2677 5115 . - . ID=g5193.t1;Parent=g5193;Name=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 4955 5115 . - . ID=g5193.t1.exon1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 4955 5115 . - 0 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 4717 4826 . - . ID=g5193.t1.exon2;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 4717 4826 . - 1 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 4456 4593 . - . ID=g5193.t1.exon3;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 4456 4593 . - 2 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 4285 4326 . - . ID=g5193.t1.exon4;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 4285 4326 . - 2 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 3901 4027 . - . ID=g5193.t1.exon5;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 3901 4027 . - 2 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 3749 3783 . - . ID=g5193.t1.exon6;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 3749 3783 . - 1 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 3407 3477 . - . ID=g5193.t1.exon7;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 3407 3477 . - 2 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 3183 3285 . - . ID=g5193.t1.exon8;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 3183 3285 . - 0 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . exon 2677 2984 . - . ID=g5193.t1.exon9;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . CDS 2746 2984 . - 2 ID=cds.g5193.t1;Parent=g5193.t1 NODE_2760_length_5204_cov_45.2168 . three_prime_UTR 2677 2745 . - . ID=g5193.t1.utr3p1;Parent=g5193.t1 #PROT g5193.t1 g5193 MCVHCHYRDIAPEGETIEETNRNLDEIAALAKELQEQTGIKLLWGTANLFSHSRYANGAATNPDAHVFACAAAQVKKAIEITHYLGGENYVFWGGREGYSTLLNTDVRRELDHMAAFFRMAVAHKAKIGFTGQFLIEPKPKEPTKHQYDYDAQTVIGFLKHYGLDSSFKLNIEPNHTTLAGHSYEHDVAVASKYGMLGSIDANTGDTSLGWDTDEFPKDLRNATLLALVLLEQGGIAPGGLNFDCKVRRESTDVADMFIAHIGAMDTLALGLRRAARMISEGVLSRMVAQRYASFDEGIGRRIESGTATFDELEEYARTHGEPKQVSGKQELYEMIFNRYQ* # ORIGINAL: g1334.t1 original gene structure, not modified by PASA NODE_1445_length_11236_cov_41.8518 AUGUSTUS gene 6117 6476 . - . ID=g1334;Name=g1334.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS mRNA 6117 6476 . - . ID=g1334.t1;Parent=g1334;Name=g1334.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 6117 6476 . - . ID=g1334.t1.exon1;Parent=g1334.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 6117 6476 . - 0 ID=cds.g1334.t1;Parent=g1334.t1 #PROT g1334.t1 g1334 MDIAEQRDRAIAAQSHAELSLQATECAHIRADDALLRVSAHVAVGAIFDSVRSVTGEHEDAHRAVISDDQTKLSKYCADFFVEQACECDIVSDIAVARANKMCKEVDDAATSIMVAECD* # PASA_UPDATE: g1335.t1, single gene model update, valid-1, status:[pasa:asmbl_1611,status:12], valid-1 NODE_1445_length_11236_cov_41.8518 . gene 8769 11056 . - . ID=g1335;Name=g1335.t1 NODE_1445_length_11236_cov_41.8518 . mRNA 8769 11056 . - . ID=g1335.t1;Parent=g1335;Name=g1335.t1 NODE_1445_length_11236_cov_41.8518 . five_prime_UTR 11009 11056 . - . ID=g1335.t1.utr5p1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . exon 10802 11056 . - . ID=g1335.t1.exon1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . CDS 10802 11008 . - 0 ID=cds.g1335.t1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . exon 10346 10522 . - . ID=g1335.t1.exon2;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . CDS 10346 10522 . - 0 ID=cds.g1335.t1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . exon 9913 10132 . - . ID=g1335.t1.exon3;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . CDS 9913 10132 . - 0 ID=cds.g1335.t1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . exon 9331 9562 . - . ID=g1335.t1.exon4;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . CDS 9331 9562 . - 2 ID=cds.g1335.t1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . exon 8769 9060 . - . ID=g1335.t1.exon5;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . CDS 8976 9060 . - 1 ID=cds.g1335.t1;Parent=g1335.t1 NODE_1445_length_11236_cov_41.8518 . three_prime_UTR 8769 8975 . - . ID=g1335.t1.utr3p1;Parent=g1335.t1 #PROT g1335.t1 g1335 MFPMVTFIDTPGLVDGAMIYPFDVDRCIFWLASQADLICVFLDPMGQALCARTMNIVEKINNEKWGDKMRFYLSKADTVPDEADRQKVLIQITQNLSTRLKNRTFDLPTIYLPSPDAPKQQRMTNQIEDLCKLIHEKVKDNVQETLKNLETDCEKLSRSIEQRLVDDTKARSDNIRATFRGIVLYSFAFGAPLLVVAWWLLAIAKDSVVRHVGDDVAGHLFSVHAIVDDLKNHAVPSTHRLEALLALLGFCFFVLLFAKFTWKTKPTLTGKEVRALNDRKKFLQTSVVQTQKTLYKEFTAQFFDNK* # PASA_UPDATE: g1333.t1, single gene model update, valid-1, status:[pasa:asmbl_1610,status:3], valid-1 NODE_1445_length_11236_cov_41.8518 . gene 4973 5916 . - . ID=g1333;Name=g1333.t1 NODE_1445_length_11236_cov_41.8518 . mRNA 4973 5916 . - . ID=g1333.t1;Parent=g1333;Name=g1333.t1 NODE_1445_length_11236_cov_41.8518 . five_prime_UTR 5823 5916 . - . ID=g1333.t1.utr5p1;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . exon 5745 5916 . - . ID=g1333.t1.exon1;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . CDS 5745 5822 . - 0 ID=cds.g1333.t1;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . exon 5438 5526 . - . ID=g1333.t1.exon2;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . CDS 5438 5526 . - 0 ID=cds.g1333.t1;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . exon 4973 5256 . - . ID=g1333.t1.exon3;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . CDS 5010 5256 . - 1 ID=cds.g1333.t1;Parent=g1333.t1 NODE_1445_length_11236_cov_41.8518 . three_prime_UTR 4973 5009 . - . ID=g1333.t1.utr3p1;Parent=g1333.t1 #PROT g1333.t1 g1333 MATLITFRNMSIFSSAVHVAYGLPALFSPKTFLRLIGSADTPANVRSLAEYVPLSGVYFLGVGGIFYSVVDSTDIVLQRRLSGLAIAWTIGNIVTGLQRHKKTKRWNPLGFNSTTMSVIGCNIPYLFAYIYLYYTLS* # ORIGINAL: g1332.t1 original gene structure, not modified by PASA NODE_1445_length_11236_cov_41.8518 AUGUSTUS gene 296 3241 . - . ID=g1332;Name=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS mRNA 296 3241 . - . ID=g1332.t1;Parent=g1332;Name=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 2088 3241 . - . ID=g1332.t1.exon1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 2088 3241 . - 0 ID=cds.g1332.t1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 1834 1879 . - . ID=g1332.t1.exon2;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 1834 1879 . - 1 ID=cds.g1332.t1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 1279 1434 . - . ID=g1332.t1.exon3;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 1279 1434 . - 0 ID=cds.g1332.t1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 1019 1114 . - . ID=g1332.t1.exon4;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 1019 1114 . - 0 ID=cds.g1332.t1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 559 771 . - . ID=g1332.t1.exon5;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 559 771 . - 0 ID=cds.g1332.t1;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS exon 296 394 . - . ID=g1332.t1.exon6;Parent=g1332.t1 NODE_1445_length_11236_cov_41.8518 AUGUSTUS CDS 296 394 . - 0 ID=cds.g1332.t1;Parent=g1332.t1 #PROT g1332.t1 g1332 MTETIAATDGGTTPPSRHKKSLSKGGDMNDSMTGHASDETSSSSSASPPTRMRPPPLSMSPNGSPTGLFRKGSDRVPANSASSPPSIPEGTAAMPTSPHSRASNAGANNGNGTGNGGIVSPRGEGQVASPFATGSIRRMKRDISVSSISELDEYHPEIVASPHRRSLVDHAPSSPNRRSVAFSNENNAPSSPHRRSAAFVDPGSPNSTAPASAAQQQRRRTSSENQKSAKIPMVIMHTNDSGDTYALPVSAPSTPGHTRRLSEIPLAMFTDIGAAPRGLKEQKPGSNQQQMETKTSETTAEKNLQDALKNVLKLAFGTVDPCDPNIDLSWKTLRAFAAFLPRHLLRRVLKMSSVQDDSQQEKTPLQERFKAVIGIVDISGFTRLSERLGERGAVGVEELTHHLNSYFGQLIDIIHRFGGDIIAFAGDALIAMWPLGEMTPEEIKKDDKEQADIMMAKHKTAVGSATMCALEIQSELAEYDTTPEVQSKAQKEYLTLHITMGYGPCAAMHVGGPLGWLYAVAGMPLGQISRIEKFGKSGDVLLSEEAWAYVRDTCTAEQVGDKKQGAYKVASVTAVEYTPTRSFAPSR* # PASA_UPDATE: g5536.t1, single gene model update, valid-1, status:[pasa:asmbl_9429,status:3], valid-1 NODE_79_length_43729_cov_42.9098 . gene 12418 13959 . + . ID=g5536;Name=g5536.t1 NODE_79_length_43729_cov_42.9098 . mRNA 12418 13959 . + . ID=g5536.t1;Parent=g5536;Name=g5536.t1 NODE_79_length_43729_cov_42.9098 . five_prime_UTR 12418 12533 . + . ID=g5536.t1.utr5p1;Parent=g5536.t1 NODE_79_length_43729_cov_42.9098 . exon 12418 12791 . + . ID=g5536.t1.exon1;Parent=g5536.t1 NODE_79_length_43729_cov_42.9098 . CDS 12534 12791 . + 0 ID=cds.g5536.t1;Parent=g5536.t1 NODE_79_length_43729_cov_42.9098 . exon 12934 13959 . + . ID=g5536.t1.exon2;Parent=g5536.t1 NODE_79_length_43729_cov_42.9098 . CDS 12934 13788 . + 0 ID=cds.g5536.t1;Parent=g5536.t1 NODE_79_length_43729_cov_42.9098 . three_prime_UTR 13789 13959 . + . ID=g5536.t1.utr3p1;Parent=g5536.t1 #PROT g5536.t1 g5536 MVVGRRATQAAANLPRTRSLQTSLHLMSTSPHMHTVDRDDSKCTLNSNIAGIGGSNATAEKRVRLNVGGRIYETFASTFAAFPDSLPGAMFNERNVHLLHPESGEYFFDRNGDAFAAVLDFYRSSGRNLHIPPTVSRRMVEAELEYFQVVDGVEARPFETHAAEEHSERARTRPRDCDSLRSTHSATAMSPKSGFMQRQFSQGAPSAGLIVDRCARTNDCKAYGETLRAVAMINAEANMGSPYFALLDEIFATAEQAAQMGCQVCVIDVIANCSYKRMCSSELDSKRSYTQTFTWCRNIVGEEDTRLLQSCHVRALIGSRLREAGLDMHDFQRFGRRGWSVRMNLWEEGHSAAAATTTQAKEPQMQSQAS* # ORIGINAL: g5541.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 33100 35798 . + . ID=g5541;Name=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 33100 35798 . + . ID=g5541.t1;Parent=g5541;Name=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 33100 33429 . + . ID=g5541.t1.exon1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 33100 33429 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 33615 33716 . + . ID=g5541.t1.exon2;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 33615 33716 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 33898 34065 . + . ID=g5541.t1.exon3;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 33898 34065 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 34477 34665 . + . ID=g5541.t1.exon4;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 34477 34665 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 34861 34971 . + . ID=g5541.t1.exon5;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 34861 34971 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 35242 35366 . + . ID=g5541.t1.exon6;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 35242 35366 . + 0 ID=cds.g5541.t1;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 35522 35798 . + . ID=g5541.t1.exon7;Parent=g5541.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 35522 35798 . + 1 ID=cds.g5541.t1;Parent=g5541.t1 #PROT g5541.t1 g5541 MADSPNDSNGRDTSEKADKKATAADLFGDDSDENDAMSGTEEQNDAQPQSQASQEHAQRTHVSEKDLFGDFSDDDEDGAAEGAREEEAVEEEPEEIVERSVSHANKFGSEVFYMRMPNFLSVKAEPFDPENYTEEYSTEKVINNEGQERLKLKVENSIRYRIVKGSDGTERMETNGRFVRWSDNSMTFHLGKEVFEVLQKDITAENMQLYSAQPLGTEEDMSLIYLAQAPLPTKLSFRPMSTKSETHKKLTVALADRFIKTSKVRIMTETMAPQAHKDQQIKAEDERIRAKQKLVEKRQKVADDYSERKKLTTDFLEDNDEVDEEEEEEEEEEKETYSNFRTTRRTARDDEAEKKRLNDAKKATESDAGAGGKRGSAGAAKGATKRRRTQRVDESDEDDEDADAVVDESEEEAKADKRGKGKRRRVALSDDDD* # ORIGINAL: g5539.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 23553 27098 . + . ID=g5539;Name=g5539.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 23553 27098 . + . ID=g5539.t1;Parent=g5539;Name=g5539.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 23553 27098 . + . ID=g5539.t1.exon1;Parent=g5539.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 23553 27098 . + 0 ID=cds.g5539.t1;Parent=g5539.t1 #PROT g5539.t1 g5539 MDEQSTPGMRAVENGQDPSTAIRNEILKFHANPLNPIDVDAAYDTLVRTVDRAGITDLDRARAHFYLWRMLRVFPKGTAKSKQSVVHKCAASAANIYELLTSVPLEARDGVWEYEVGACLTHGVGTAKDNVASFKHYERGDALGVIACAALLGFAYDRGNGVPANPTRAFELYKKGAVAGSSSAQFNLAVCYDDGDGVEMDKQKAVDWYLRAAERGKGLAQFNLAVCYSEGDQIPRDYVKARHWFGKAAEVGDREAQLEFGLYYMHGKGGVRDVPRGLEWVRASAEAGHVAAQLKMAKWHCKGRHGLEKDPASALAWHVRAVATAETVEDDDEDPVQDGRAQFLLGLSHEKGMLSPTRSKDDAAAADLYVRASSFGHLEAQIRLGSMYHEGRGVPKDGDRAVALWTKVEAHQMITNAFPYDPRHTVRMELTEGRFPTMYGHTNSLGTDPRSVRELEMMALSAAIREKPQWKVDMDNKETVERWRAEALSQGVTPAMFRYVLDELVYYRKLSIGAIEPGVGDVTWRADGLVLPALKAALVDGAAALEDIPEGHRDYHPGSDRQVLNLVHPSMYCYVQGVSRLTRIDANPPLKWMGAGVAAGEKSFEGAEHDHDSDATNEGEDNEDAVGSEAGRSNDGLPTAIGGDDAGSTSAGVLSGLDAADASGIVGMGALESNASVAISNSTDDGTAVDAGGVESRVDSVDAGVGSRGGPGGVSGVESRADGGERLEEPRVPLMQNIARTFYDSEVDWDDTDWDYGRSKIYQWLPAEFDVDSAGKVKIQSYINNLHPYHHRDLYVTIASIFELFVPMFERVLTDVCFPSPLRLTVNPDDWYTTSPSSIASEGSDKDDESYEDSSITSTSEIAERDAAVEDAVDTDDAAAESDVADREGIVSSGEAPALASSAENTLDDGSGGEDGAADDEDEDNDNDDEERNNDRNERVARQPHVPAFMAPFGPDEVVDLRGRRLQVIVKLLNIQLTPEQPEYRGGVWCMDGMKNERIVASGVYYYKSENISESCLQFRTVVVPPPHGTAHASDIQGTTAIYGSTIWKSNQEIGRVVTKEDICVAFSNTLQHRASPFRLVDPTKTGVQKMLVFHLVEPTKPILSTLNVPPQQLDWYAESVRCAGGEMRRLPLDLLDTILERVDWPMSRAVAKHHKRLSMAEREFYMHTHTREIFEREFTL* # ORIGINAL: g5538.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 18820 21778 . + . ID=g5538;Name=g5538.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 18820 21778 . + . ID=g5538.t1;Parent=g5538;Name=g5538.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 18820 18972 . + . ID=g5538.t1.exon1;Parent=g5538.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 18820 18972 . + 0 ID=cds.g5538.t1;Parent=g5538.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 19253 21778 . + . ID=g5538.t1.exon2;Parent=g5538.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 19253 21778 . + 0 ID=cds.g5538.t1;Parent=g5538.t1 #PROT g5538.t1 g5538 MGWIHALLALFLLSSHYITCARGAPLSGTGHAVNSQSPPIHASNDTAATGKSPSGPALQPDGTIRLPSIDEDELSASNQGVSVDELLLVAGRPWAAHVAALWGADGHWQLRINSSRPWLAVPKNAFAMIVRGNSVRFSPPTDFVGTAATYFTAWDSDVTTDKVSLPKTSIALKVRPVNDAPVMPFGSVVSLSRTSPAAHIDGGVLVHDMVVSTGVTDVDTRISAVGLAVYTTDDGWEFSADDGVTWQDVAARGNLDARLLAPSYRLRHGSSGKTARDVSSVGNNMGRLSALAWDATEGKAGGRANVAHSNAVSTLAAVVTSGSSAVPITLGVFQGSSVPPQAVGSVWAGYDIRTGAAKAECPYKENSVKVSPRIPNNQAQYKLGFTYSEESRSKTDQLAVAVEGSYLAFSASASLATSKASESSSSTVTFVLFMSKRTHSEALTESRLDDAARRLLNSSPESFLGVHGTHYVMSRTYGCSMRAYGRYTFKTESDARSLKQEFSAKFSGRIVDFSASQSFDKMAKSVSDNYSVDISVEGDFATDADVQFKPDTDGRSLAKWVERAQSKWASLCKQDTSTVKEIVVYSWADHPDVAAVPEAREICVQLGDLHGQDSMLGLAIRKREQLVANLLQAQVDVAELGPIKPQHIYGMGKFTGCASDIDITGPTADSLAAVQRCRVRVRELSYYDSAATPKLQVDKFISELSVISGECNQALLAITHRWDFSYRDVRLSGTGVEYNIRYKAVGSAASFITFGSAFRGSGSSPIPVRCGLGTSANCLKYYNDEQEYDPEFHGIILAGCDAVKTIDAKFFSGGRQPMPCAGLVPAMWANSVAARTNTMQGKFNRMPTFLTNYGDTFLEMGVRAPLSGDLISTQRFSGYVTAAPVMYGFCTD* # PASA_UPDATE: g5535.t1, single gene model update, valid-1, status:[pasa:asmbl_9431,status:12],[pasa:asmbl_9432,status:12],[pasa:asmbl_9433,status:12],[pasa:asmbl_9436,status:12], valid-1 NODE_79_length_43729_cov_42.9098 . gene 5618 11268 . - . ID=g5535;Name=g5535.t1 NODE_79_length_43729_cov_42.9098 . mRNA 5618 11268 . - . ID=g5535.t1;Parent=g5535;Name=g5535.t1 NODE_79_length_43729_cov_42.9098 . five_prime_UTR 11202 11268 . - . ID=g5535.t1.utr5p1;Parent=g5535.t1 NODE_79_length_43729_cov_42.9098 . exon 7523 11268 . - . ID=g5535.t1.exon1;Parent=g5535.t1 NODE_79_length_43729_cov_42.9098 . CDS 7523 11201 . - 0 ID=cds.g5535.t1;Parent=g5535.t1 NODE_79_length_43729_cov_42.9098 . exon 5618 7248 . - . ID=g5535.t1.exon2;Parent=g5535.t1 NODE_79_length_43729_cov_42.9098 . CDS 5846 7248 . - 2 ID=cds.g5535.t1;Parent=g5535.t1 NODE_79_length_43729_cov_42.9098 . three_prime_UTR 5618 5845 . - . ID=g5535.t1.utr3p1;Parent=g5535.t1 #PROT g5535.t1 g5535 MPVTRNSSGASRAPAAMPGEDQKPIPPAAVHDAQRDAFVHADVKDNDEEDGSSAENVRASANNDTIADLMDGLVNTPAPGGDANKVKDVISNLQGPFETWKTKAFQTIGTLLMGTNRIGKTFLINLVLLMSCVTPTAYKSRAYKKAREALGEHKLEACIDADGAVTGTKAGEGVPQQHDPSNPREIKIIYADDMDAYKDGYTPEVAAEHRRTTYTVLRDHADQNRITDQNPWAGFIFPSAQQSTSTTTAVHNRICFGFTFHVMVIHQTLEFIRAVLAKIARDKLEKRHIDKLNRERWMQITDTKLETQTVDLLRGYADHPDTIPIHKAILDVAGECVVYAGKGDDLDADRWFVQGILGVINGKSDKPGIDQDAYKRRRFILQSLRTYGPCKILDGGVQIDDAPGLDDVDPLSKAVLRESEEDTTTRTVIGVVEKDVSGTETLINRLKESPFTRRLMLHPERHELYILLYSERTGSIFTTTIQDDESYAKHQKIWEKFAEDARSSIREMFVEVFQDNFNDDAAAAALSENETVDKMMQRVRVVTGFPVLYASLQLNEPLRRQLARDDRSMEQTLLERTHGRELFGIFESLNDAQKSAELMPVAPTLRRIEATATEEIERYDRRASGPGLHTERTAQPAESGFTASAYNQAYKLKPNSRWLVKKELGEFESFVRNQCTTSGQKFDAARQAAITALCNNLTENMKANDIEGRWRGVRDKLTKRNAADVFSPLSKGVASEPFPVKDVIFRKGDAPEDAVERFVAELTAAFGALKIALCKDFAMILEVKVPGAFERPRGGSISPCASELRKAGEEKLLAALQANVDGFFRKGRHDRVNIECILRAWHVACARAVEGDLRKYADIANNSKDDADLRRALPEAFKKTSEKAVGIFATTLETNVKRYVNATWKEIAGEEMRGGKRHARVPTMRRQVQFLCAELMQRKHDMEADVNAMQTQAVRRRASSSQGDDNREQEGISADDDGPEDPTEHIAYAKHCRSLARKLFQEIERLYTARLDLAIYGVKFEDRNSLALRTLELVYACAAMPRLPDRRAASSLVVSTPVKIPRYPGPRKAGCLRAPPTARTSVSETSLKRTLAASKLKLCAATGDGGLFDALVTAIYGEGLPVDMQRTACEYLRLNAVRFQAKAVQRGDEAAFEKSVETTLNKWVQYVLDPSAIFDELLLHMVFQFLGSDTRFNVWIGSESDAVLHQITSKNSCSSMHYNIAIVASDDPTDEPAYVPLRHTFRAVLPIERKIKTPPVVAPPAPPPPPPDTILVQEDATYDIVLDTSAIMQADFPKTANALRKMAWQQQKVVQFVVPYVAFEEVLRLAGSHLEIGIRARQRRNWIGRVQDWDVTVPILPSALRIQETIWNNDITTEICCRSEERRADIRIMHVARTCATVRPGRTLFWTDDKAIIIEERNRTAHAFPGALRPFVKNTAQIVAILNKNRANAFTELFSRTVDEESRYELFYADRPPASASASANSIGSVRESRPTRMSPPPRLGACTDGSLRSTSPAEREATLGGGDIARRPRTREESVSSERSAKRARTEERSPDTGDTPARRTDTLQPPDAPRPMSLNGSWDKPYGDRQVRRMDRSDDRDRYVRDRQEYRSDDRGRYERGGNERYASDRHRDERSARAGSSTRDNVANRAGIHQPSQRTDEGSRGWEARRPERRHRDSDNGSRSDDDAKRRRYE* # ORIGINAL: g5537.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 14257 17705 . + . ID=g5537;Name=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 14257 17705 . + . ID=g5537.t1;Parent=g5537;Name=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 14257 14388 . + . ID=g5537.t1.exon1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 14257 14388 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 14498 14785 . + . ID=g5537.t1.exon2;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 14498 14785 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 14887 15024 . + . ID=g5537.t1.exon3;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 14887 15024 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 15226 15468 . + . ID=g5537.t1.exon4;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 15226 15468 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 15743 15964 . + . ID=g5537.t1.exon5;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 15743 15964 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 16151 16257 . + . ID=g5537.t1.exon6;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 16151 16257 . + 0 ID=cds.g5537.t1;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 16451 17705 . + . ID=g5537.t1.exon7;Parent=g5537.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 16451 17705 . + 1 ID=cds.g5537.t1;Parent=g5537.t1 #PROT g5537.t1 g5537 MPQCTVSHGLARPANIYYELHGQGPMRVALVMGFGTSLEGWRMQVDHFLPKGGEFTVLVLDNRGCGRSSVTHWVQTIETMARDLICVLDQLGWSTGVNVVGISMGGMIAMEAVIHSHGQFDSLTLVNTHAGGLGSLPQFKGLHHFTRVFTSTNVKDRTEHALRLLYGRRAVDSPEKMEILRQSLRQRFGRSPPTGPKGLFNHFTAVSMHWVSEKRLRRLGASGLPILIIVGTDDNLIRPSNSFALHAAIGTSRLRVFEGCGHGLIAEVPDEFNAVLEEHIRASHNHAKGTAVGGAGSVGVVVRPIAPVADGELLSGLDALFLVAEAPQQVMTISGFCVLEKEISREGVVATFDRWTRQYPRLRQTVSQRSPLRPWFHWVSEPNFKVADHVNVFRLSNGESVQDCISRIVSSPLDRSKPLWDTNLIVLGDGARDSALVQGASCVLLTRLHHAVADGGGSVQMMLSLVGADVQAQAQGQPHVNMQARTNSSATHGHSHSGEVETPARAPNAVLSTLVGIFWGLFGAVFSIVYYPLMAVFWALAAIVISVKVALIYVQPGSPFVSKKTASTEKRVAWTAPIDLAEVKQIGKHISVSVNDVLLSCVAGAIARTKRASYVRPDATCMVPFNMRGRLHGQSAPVAMGNHSITVWCSLPLSESDPIRRTLVVKRRMDGLKKSPESMVSMCFSAFLGYMPAWLARIAIAPLGSKAAAVITNVPGPQRTLQVAGEPLKTYTGIIPVPGDNGVGMTIFSYDGRVTVSVHGDATLEPSVDEICAAISSEFAALKVATAAVAAQAK* # ORIGINAL: g5542.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 37026 37547 . - . ID=g5542;Name=g5542.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 37026 37547 . - . ID=g5542.t1;Parent=g5542;Name=g5542.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 37026 37547 . - . ID=g5542.t1.exon1;Parent=g5542.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 37026 37547 . - 0 ID=cds.g5542.t1;Parent=g5542.t1 #PROT g5542.t1 g5542 MPIDLNFRSSRRRSSSQSYVNARGSPSARVAHSPLPQVVQGGSQSGILTREEFFAAQIQHQQRQRPVPIADAPRNQEHTPRHRNAYIVSDANMDDDDYEEEEDATTDSEDADGVSHAAGAAAAAAAAAYFQAKTVIALKCGYCRNIVTARAMRAILLADTKVELFSTDHPPVR* # PASA_UPDATE: g5540.t1, single gene model update, valid-1, status:[pasa:asmbl_9438,status:12], valid-1 NODE_79_length_43729_cov_42.9098 . gene 27568 32386 . - . ID=g5540;Name=g5540.t1 NODE_79_length_43729_cov_42.9098 . mRNA 27568 32386 . - . ID=g5540.t1;Parent=g5540;Name=g5540.t1 NODE_79_length_43729_cov_42.9098 . five_prime_UTR 32313 32386 . - . ID=g5540.t1.utr5p1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 32163 32386 . - . ID=g5540.t1.exon1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 32163 32312 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 31901 32050 . - . ID=g5540.t1.exon2;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 31901 32050 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 31597 31713 . - . ID=g5540.t1.exon3;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 31597 31713 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 31202 31369 . - . ID=g5540.t1.exon4;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 31202 31369 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 30855 30968 . - . ID=g5540.t1.exon5;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 30855 30968 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 30446 30676 . - . ID=g5540.t1.exon6;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 30446 30676 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 29929 30160 . - . ID=g5540.t1.exon7;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 29929 30160 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 29486 29664 . - . ID=g5540.t1.exon8;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 29486 29664 . - 2 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 29019 29167 . - . ID=g5540.t1.exon9;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 29019 29167 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 28691 28770 . - . ID=g5540.t1.exon10;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 28691 28770 . - 1 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 28233 28384 . - . ID=g5540.t1.exon11;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 28233 28384 . - 2 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . exon 27568 28054 . - . ID=g5540.t1.exon12;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . CDS 27650 28054 . - 0 ID=cds.g5540.t1;Parent=g5540.t1 NODE_79_length_43729_cov_42.9098 . three_prime_UTR 27568 27649 . - . ID=g5540.t1.utr3p1;Parent=g5540.t1 #PROT g5540.t1 g5540 MGHFRTAVAVLAMIACIAVSAFALPKADGDVYQIGTGIADITGPAADVNMMGYAMPQQTAKGIHFRLRSRAYIFAQADGSNRVVFVNVDACMVSQILRIKVLEQLKSKFGDVYHEDNVLLTGIHTHSGPAGYLQYVLFQVTSLGFVEQSLDALVAGIVSSIERAHGNVRQAKLLTNSGELLDANINRSPTAYLNNPAEERAKYSYDVDKEMTLLKIVGLDNSDIGMINWFPVHCTSMNNTNRLISGDNKGYASYLFERMVNGPAAFPGKGPFIAAFAQANEGDVSPNTKGARCIDTGLPCDAVHSTCNGRNELCIASGPGNTDRESTQIIGQKQFDKAAELYKSASSVVSGPIAFVHTSIDMSNQTVKLADGTTGNTCKPAMGYAFAGGTTDGPGMFDFKQGTTTGNIFWNTVSGILKKPTADQVTCQHPKPVLLDTGQISFPYGWQPAVVDVQMFRIGNIFIAAVPAEFSTMAGRRLKDAIADTLRSAGAFPEDGMVMVSGLSNTYSDYVTTFEEFQVQRYEGASTAYGPHTLSAYIAAFQNLALNLVGKGTPIPPAAPKPDYSGKMLSLLPPVIIDAPPIGKSFGAVLQDANTAKAYARGYDTVSVSFATACPRNNLRQEDTFLSVERLDDTTKEWIRVADDGHWETRFIWERSSIVSPQSTAVIEWEIPADAATGTYRIRHFGTSKSLFGKYSDFTGTSASFTVL* # PASA_UPDATE: g5534.t1, single gene model update, valid-1, status:[pasa:asmbl_9435,status:3], valid-1 NODE_79_length_43729_cov_42.9098 . gene 648 5466 . - . ID=g5534;Name=g5534.t1 NODE_79_length_43729_cov_42.9098 . mRNA 648 5466 . - . ID=g5534.t1;Parent=g5534;Name=g5534.t1 NODE_79_length_43729_cov_42.9098 . five_prime_UTR 5297 5466 . - . ID=g5534.t1.utr5p1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 5096 5466 . - . ID=g5534.t1.exon1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 5096 5296 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 4835 4942 . - . ID=g5534.t1.exon2;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 4835 4942 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 4541 4650 . - . ID=g5534.t1.exon3;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 4541 4650 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 3879 3993 . - . ID=g5534.t1.exon4;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 3879 3993 . - 1 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 3208 3677 . - . ID=g5534.t1.exon5;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 3208 3677 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 2275 2950 . - . ID=g5534.t1.exon6;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 2275 2950 . - 1 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 2008 2108 . - . ID=g5534.t1.exon7;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 2008 2108 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 1661 1709 . - . ID=g5534.t1.exon8;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 1661 1709 . - 1 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 1290 1394 . - . ID=g5534.t1.exon9;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 1290 1394 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . exon 648 1087 . - . ID=g5534.t1.exon10;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . CDS 977 1087 . - 0 ID=cds.g5534.t1;Parent=g5534.t1 NODE_79_length_43729_cov_42.9098 . three_prime_UTR 648 976 . - . ID=g5534.t1.utr3p1;Parent=g5534.t1 #PROT g5534.t1 g5534 MERSLPPTVAELQARIGGLQEELNNALTLVTKYRAENETFKLNFESLRSAHSQQLEVEQGLKQQLNAAEDSLRLSEIRHEDSFRQWRHELDVRLREIDELKKRVITPHDIEVVRMQIKEELEIPHKQRLEQLERENEQYRTSAFKLRRDFELLRVESDHEKAEHLTIVNEIEQRRANEVRELIARIELLQQASASGDDAVEHKLRAALKEGVDLRAKLKATLAEVEDVRSQKEEAEVERERQARNHQRVVSDATVHRHTLEAQLESATLRIARADEEVNRMRRQRDEDLSRLDALEKELGRVQRDLDEASHAAEVEKSELRLQHAEKQGLWDRERTQLVREIHDARVRAEEAEKAMHEAVEEAAQRERDLARQAKSLRSEDFAKIQQLEASRAEYESRADAAESARADVESRMRGELERLSSALTAQTNKAQGASREIEELRQRLSDSEAHHMDLSAKVERMQRDLASAEQRLSAASASESEMRRSHKRMDAAVADARAELAHVLSVGEHERAQMRAALERAVRERDALRTSAERRDSELERKLGEETIKREAEVEAHKQTKSRCARKIRHLLDKLDILAAKNEKFDMEKQMIKKSSELEQINLNRRLREMQRKQDEFRVLLNADGSVASDPIAAPLPYLSLFEQERRTRNMIGQMDRHLDTMTETMREQVAGLTGVTGIF* # PASA_UPDATE: g5543.t1, single gene model update, valid-1, status:[pasa:asmbl_9439,status:3], valid-1 NODE_79_length_43729_cov_42.9098 . gene 38443 41440 . - . ID=g5543;Name=g5543.t1 NODE_79_length_43729_cov_42.9098 . mRNA 38443 41440 . - . ID=g5543.t1;Parent=g5543;Name=g5543.t1 NODE_79_length_43729_cov_42.9098 . five_prime_UTR 41296 41440 . - . ID=g5543.t1.utr5p1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 41252 41440 . - . ID=g5543.t1.exon1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 41252 41295 . - 0 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 40564 41155 . - . ID=g5543.t1.exon2;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 40564 41155 . - 1 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 40165 40418 . - . ID=g5543.t1.exon3;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 40165 40418 . - 0 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 39604 39732 . - . ID=g5543.t1.exon4;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 39604 39732 . - 1 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 39147 39309 . - . ID=g5543.t1.exon5;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 39147 39309 . - 1 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 38805 38926 . - . ID=g5543.t1.exon6;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 38805 38926 . - 0 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . exon 38443 38650 . - . ID=g5543.t1.exon7;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . CDS 38524 38650 . - 1 ID=cds.g5543.t1;Parent=g5543.t1 NODE_79_length_43729_cov_42.9098 . three_prime_UTR 38443 38523 . - . ID=g5543.t1.utr3p1;Parent=g5543.t1 #PROT g5543.t1 g5543 MGKNSKGKQLHPEDGLTEDGLGNEGSLKRKGLDSHDDITSKRRKVTDEAEEDEEGDNEDVDQEDGEDDGEDEDEMEAGDEEEMLGAATVEDSAVHGGAGDDYGAGSLAAGIPEPTLGSAMEGYDGDLVGKKRGPRGMPRPKLTEVSEPLGAAGMGRRRRRFDGDGPVLSAETDVTQMWITSKQLRQLADQGVVWKTGKWTNKETQSLQENIQSYLRENNLGENIDVLLSKSGEHRDFWRRAARGLGRPLFNVYRHVMRTYDANNNRGRYTPEEDERLRQLVASTGHDWKQIGLKMNRSAGSCRDRWRQMAGDKKGAWTQEEIEKLSAAVHALTGTKIGERVDAHVPWVAVAEMVGTRSERQCRVKWYEDVNLKESVNPNTQWTETDTRKMLDVLYNSGAEDESEIVWKNLFQGWAWSPLYISRKWSHLVKLMSGREALTFEQKLDYLRSVQTRYPDLADDEDVSNPPGVVDQDPKQ* # ORIGINAL: g5544.t1 original gene structure, not modified by PASA NODE_79_length_43729_cov_42.9098 AUGUSTUS gene 42217 43614 . - . ID=g5544;Name=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS mRNA 42217 43614 . - . ID=g5544.t1;Parent=g5544;Name=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 43339 43614 . - . ID=g5544.t1.exon1;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 43339 43614 . - 0 ID=cds.g5544.t1;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 42956 43138 . - . ID=g5544.t1.exon2;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 42956 43138 . - 0 ID=cds.g5544.t1;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 42520 42678 . - . ID=g5544.t1.exon3;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 42520 42678 . - 0 ID=cds.g5544.t1;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS exon 42217 42327 . - . ID=g5544.t1.exon4;Parent=g5544.t1 NODE_79_length_43729_cov_42.9098 AUGUSTUS CDS 42217 42327 . - 0 ID=cds.g5544.t1;Parent=g5544.t1 #PROT g5544.t1 g5544 VRDVVDPVADEQLASFVVGSHVRHHPNAAKEGEDGAPLAPLRPVIQGDIEPISQDLLRKYIVYARRNIRPKLQNVDQDKLSSVYAELRRESMSTGSIPITVRYVESMIRMSEAHARMHLRDHVRDDDVNVAIRVMLDSFISTQKFSVMKSLRKSLSRYITYKKDNNELLYYVLQSLVRETTQYLQNRHQGELPSFIEIDKKDFEARARQLNVFDLSTFLKSDLFLKNNFTLDAKKNAIIKTF* # ORIGINAL: g5955.t1 original gene structure, not modified by PASA NODE_2932_length_4711_cov_38.816 AUGUSTUS gene 276 842 . + . ID=g5955;Name=g5955.t1 NODE_2932_length_4711_cov_38.816 AUGUSTUS mRNA 276 842 . + . ID=g5955.t1;Parent=g5955;Name=g5955.t1 NODE_2932_length_4711_cov_38.816 AUGUSTUS exon 276 409 . + . ID=g5955.t1.exon1;Parent=g5955.t1 NODE_2932_length_4711_cov_38.816 AUGUSTUS CDS 276 409 . + 2 ID=cds.g5955.t1;Parent=g5955.t1 NODE_2932_length_4711_cov_38.816 AUGUSTUS exon 729 842 . + . ID=g5955.t1.exon2;Parent=g5955.t1 NODE_2932_length_4711_cov_38.816 AUGUSTUS CDS 729 842 . + 0 ID=cds.g5955.t1;Parent=g5955.t1 #PROT g5955.t1 g5955 AVLSIECREPDETWDMHYPALVFETPTRWITILIERKPYEHMKRALEKMAACGVPTWKLLDRAFAATYMPVMPRPSFMPQL* # PASA_UPDATE: g5956.t1, single gene model update, valid-1, status:[pasa:asmbl_5262,status:3], valid-1 NODE_2932_length_4711_cov_38.816 . gene 1304 4086 . + . ID=g5956;Name=g5956.t1 NODE_2932_length_4711_cov_38.816 . mRNA 1304 4086 . + . ID=g5956.t1;Parent=g5956;Name=g5956.t1 NODE_2932_length_4711_cov_38.816 . five_prime_UTR 1304 1408 . + . ID=g5956.t1.utr5p1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 1304 1451 . + . ID=g5956.t1.exon1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 1409 1451 . + 0 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 1826 1911 . + . ID=g5956.t1.exon2;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 1826 1911 . + 2 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 2041 2165 . + . ID=g5956.t1.exon3;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 2041 2165 . + 0 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 2555 2632 . + . ID=g5956.t1.exon4;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 2555 2632 . + 1 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 3113 3220 . + . ID=g5956.t1.exon5;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 3113 3220 . + 1 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 3500 3608 . + . ID=g5956.t1.exon6;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 3500 3608 . + 1 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . exon 3967 4086 . + . ID=g5956.t1.exon7;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . CDS 3967 4068 . + 0 ID=cds.g5956.t1;Parent=g5956.t1 NODE_2932_length_4711_cov_38.816 . three_prime_UTR 4069 4086 . + . ID=g5956.t1.utr3p1;Parent=g5956.t1 #PROT g5956.t1 g5956 MSGCCGAQAHAHGNGHSHGGADAHDDPERGQEFSLYRYIDSTKAWCLNEAEKGSVMNCFKPWNERKVVDKYIESDADEQLIVYIPFTGDVKLKSICVIGGDNGAHPKKMKAFTNRDNIDFDNVEGLAAVQEWDLHEDGDGVLEYQTRLAKFQGLSSLILYFPENFGADTTRVYYIGLKGEFRPMKRDAIMTGVYEASANPADHKAKATESAHQQIH* # ORIGINAL: g13719.t1 original gene structure, not modified by PASA NODE_5207_length_969_cov_44.5996 AUGUSTUS gene 142 691 . - . ID=g13719;Name=g13719.t1 NODE_5207_length_969_cov_44.5996 AUGUSTUS mRNA 142 691 . - . ID=g13719.t1;Parent=g13719;Name=g13719.t1 NODE_5207_length_969_cov_44.5996 AUGUSTUS exon 142 691 . - . ID=g13719.t1.exon1;Parent=g13719.t1 NODE_5207_length_969_cov_44.5996 AUGUSTUS CDS 142 691 . - 0 ID=cds.g13719.t1;Parent=g13719.t1 #PROT g13719.t1 g13719 MAPVSGYDEGAPRTIFRVFEESVAHYGDRPFLGTRNPASGCYAFRSYDQTKHNATLIAGALLNQLELSRGCRVALCSVNTARYVEAIYACTSIGLPIVPVHTVFESDAVEYMLEHSEIGVVFCSKERLGLIMRAAKRVPGVKHVVIMDESVQSGGGDGGAVGGDAGAPTVTTLNELLAKESLR # ORIGINAL: g6110.t1 original gene structure, not modified by PASA NODE_1762_length_9339_cov_42.7392 AUGUSTUS gene 1818 6086 . + . ID=g6110;Name=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS mRNA 1818 6086 . + . ID=g6110.t1;Parent=g6110;Name=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 1818 2105 . + . ID=g6110.t1.exon1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 1818 2105 . + 0 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 2394 2563 . + . ID=g6110.t1.exon2;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 2394 2563 . + 0 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 2785 2910 . + . ID=g6110.t1.exon3;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 2785 2910 . + 1 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 3259 3471 . + . ID=g6110.t1.exon4;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 3259 3471 . + 1 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 3654 4119 . + . ID=g6110.t1.exon5;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 3654 4119 . + 1 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 4295 4704 . + . ID=g6110.t1.exon6;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 4295 4704 . + 0 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 4826 5063 . + . ID=g6110.t1.exon7;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 4826 5063 . + 1 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 5181 5320 . + . ID=g6110.t1.exon8;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 5181 5320 . + 0 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 5487 5760 . + . ID=g6110.t1.exon9;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 5487 5760 . + 1 ID=cds.g6110.t1;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 5919 6086 . + . ID=g6110.t1.exon10;Parent=g6110.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 5919 6086 . + 0 ID=cds.g6110.t1;Parent=g6110.t1 #PROT g6110.t1 g6110 MAKAISAGRMGPASNAFATGTTTTVESASTWDDVLRKHPLLTSISMVGEGFDTRSRNIFAERDGVLYVFDPLGKYSVLFAVNLLKLKDTKDGHAYQELLCNPAPVHRDVIGISVNSTGQFLAIVYESGVDVVELPRLGANGVFGRGGGQATCRLFSLGSTFHERRPSVRVLQAKWHPLGDGGMHIAVLTSDNSLRLYDIRNPSNAEHTISLMRDSPSSTSIGVAMETRDVKFFDFGPSHGWEAFAVFYITETGDMFCVCPVLPSKSIVPKQLVDALLATSKRRFEALQNDEASGSDADIANASTQVRFASALSSSAVPLRAAPPPVDRNQPDSPSENKSPEGTSQTYVRVSPPSHVTGNRQPRRQGPFAVSPEQDDDYAQPIGLFGVMSLLPCTVVVGREGGAIDLCVMADRISPEWEGGEETHTTRAELSVGEDDVEWDAKGAPVLHLYERIELTLPASSSSLLALHRDRVRPDRFVVSHCAGVHMFTLHWLAHYERFLAESSHGHASGVVQSPTKGRSQTPEFGSLDDTADDLVEPPPEGDVTEVTWLLQTSGPSGNAVQLSGLAIVDDARFLDHFILALTATGSVIYVPLSLYGSAIEPLSDQRDTLAKRGPAIASTAFEDKIRGIINPSGSMKAPMQHIPKPAESMSTSDGLKFVVEAVGKLRQESLKPAYHAHAEIQGKVDHLKKVEAEQKGEIEDLRDHIAKMTKEEAALSSRVKAVVSNAGTLASRMDAILMRLGGMQPVLSEAEMKYHEELGNLSRVVDGLTKKLKDMKKRHDAEVSAAAAARSHRDELPESQVRRIRPLLEKEWGSLQVYCGLGAYLTCRT* # ORIGINAL: g6109.t1 original gene structure, not modified by PASA NODE_1762_length_9339_cov_42.7392 AUGUSTUS gene 239 653 . - . ID=g6109;Name=g6109.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS mRNA 239 653 . - . ID=g6109.t1;Parent=g6109;Name=g6109.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 578 653 . - . ID=g6109.t1.exon1;Parent=g6109.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 578 653 . - 0 ID=cds.g6109.t1;Parent=g6109.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 239 357 . - . ID=g6109.t1.exon2;Parent=g6109.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 239 357 . - 2 ID=cds.g6109.t1;Parent=g6109.t1 #PROT g6109.t1 g6109 MSFSSAFAVAAVTHKKADYELLEGIGCNASGHLTVYRARHTPSGQFLVVKRVDLEHGMQRYGNDK # ORIGINAL: g6111.t1 original gene structure, not modified by PASA NODE_1762_length_9339_cov_42.7392 AUGUSTUS gene 6707 9134 . - . ID=g6111;Name=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS mRNA 6707 9134 . - . ID=g6111.t1;Parent=g6111;Name=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 8892 9134 . - . ID=g6111.t1.exon1;Parent=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 8892 9134 . - 0 ID=cds.g6111.t1;Parent=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 8430 8723 . - . ID=g6111.t1.exon2;Parent=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 8430 8723 . - 0 ID=cds.g6111.t1;Parent=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS exon 6707 8218 . - . ID=g6111.t1.exon3;Parent=g6111.t1 NODE_1762_length_9339_cov_42.7392 AUGUSTUS CDS 6707 8218 . - 0 ID=cds.g6111.t1;Parent=g6111.t1 #PROT g6111.t1 g6111 MSDGDYERQDERSSLLKREPANAQTTYGCAEEDDEPTLQIPLIGRARVRKFNVIWVSLSFFVVFVGYNTLQNYITSLLPGHLGNESLAVLYGTVSLTVFAAPVIVSRWDERFAMVAGSCCYVVYMVTLVKTVDVVVLVFSTVIGFGAAILWVAVGAFLTKCSLPHERGTAVGIFWGTFQVCNIVGNLFAFFIFKYFSKGALFGALSVVSAVGTVMLCFLRRIPRGAHVTQSPKQAEATCGKELGSQYNVSASATSVTSAGGESTATSTACASNAGAVVEEDAAPISLSRVFSDSLLMFKDTRMLLLFPMFFWIGFELSFWTGEYPQLLDQKVIGLVMTCAGVGDALGGILMGVISDRIGRSPTAIAGTLIYGGGLAVAGVLKHNPDAFAHVCVDNACAPWIAFVGAFCFGLGDSAFNTQMFALLGQLHPSQSVDAFTIFQFVQNLGACVGYFYAIKTPLHGADGTYAQLYVQAVILSVACVLFCVVDMQYQRNLRNNKEVSGDEGGRPVSINSTVGNSLPLPDTAEGVLSAALSYAGPVRSSLMSHCERTFCAETIMFALAAGEYLKEARKRSPSIASASASASASASASVSSKDSLRSVGLDGSSQKLADRGARLVHQFITPGCQMEVALSSQTRYALVRGPVTSEAVNAALEEVLFLLRSSVCPRYLHSEEYAALQRLSG* # PASA_UPDATE: g7433.t1, single gene model update, valid-1, status:[pasa:asmbl_6748,status:12], valid-1 NODE_3936_length_2489_cov_49.2295 . gene 269 2048 . + . ID=g7433;Name=g7433.t1 NODE_3936_length_2489_cov_49.2295 . mRNA 269 2048 . + . ID=g7433.t1;Parent=g7433;Name=g7433.t1 NODE_3936_length_2489_cov_49.2295 . five_prime_UTR 269 270 . + . ID=g7433.t1.utr5p1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . exon 269 355 . + . ID=g7433.t1.exon1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 271 355 . + 0 ID=cds.g7433.t1;Parent=g7433.t1;5_prime_partial=true NODE_3936_length_2489_cov_49.2295 . exon 566 640 . + . ID=g7433.t1.exon2;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 566 640 . + 2 ID=cds.g7433.t1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . exon 967 1068 . + . ID=g7433.t1.exon3;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 967 1068 . + 2 ID=cds.g7433.t1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . exon 1286 1357 . + . ID=g7433.t1.exon4;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 1286 1357 . + 2 ID=cds.g7433.t1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . exon 1653 1727 . + . ID=g7433.t1.exon5;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 1653 1727 . + 2 ID=cds.g7433.t1;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . exon 1971 2048 . + . ID=g7433.t1.exon6;Parent=g7433.t1 NODE_3936_length_2489_cov_49.2295 . CDS 1971 2048 . + 2 ID=cds.g7433.t1;Parent=g7433.t1;3_prime_partial=true #PROT g7433.t1 g7433 NGLANYPVATINAFDTTGRIELTDCSIRANNNYARVFNLALNAVIVIKGGIIADHNMTSPTITITPQTRIIFTSDFVQINMTDVVFKNNWVYRMIQAALDVQTRALRCTFTGNNLVQYVFHSGDRSTIAATDCNFTANTGVAFVVFYSFGTTVIDSIRNRMT # PASA_UPDATE: g7271.t1, single gene model update, valid-1, status:[pasa:asmbl_6001,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 20031 21063 . - . ID=g7271;Name=g7271.t1 NODE_33_length_56540_cov_41.8554 . mRNA 20031 21063 . - . ID=g7271.t1;Parent=g7271;Name=g7271.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 21011 21063 . - . ID=g7271.t1.utr5p1;Parent=g7271.t1 NODE_33_length_56540_cov_41.8554 . exon 20830 21063 . - . ID=g7271.t1.exon1;Parent=g7271.t1 NODE_33_length_56540_cov_41.8554 . CDS 20830 21010 . - 0 ID=cds.g7271.t1;Parent=g7271.t1 NODE_33_length_56540_cov_41.8554 . exon 20031 20613 . - . ID=g7271.t1.exon2;Parent=g7271.t1 NODE_33_length_56540_cov_41.8554 . CDS 20111 20613 . - 2 ID=cds.g7271.t1;Parent=g7271.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 20031 20110 . - . ID=g7271.t1.utr3p1;Parent=g7271.t1 #PROT g7271.t1 g7271 MAVDSKATKKCCGCSWTRCLLWTAVVLSAFVAGFHYYLQTKSFIFDQKDIQKIAEEAVRKGLNQSESFAFIVNELRAKHGSHILPSLEFQFINAGGWMGSFGLLHASLTEYVLIFGTEINTGGHSGRYWADIYDTILSGEFRQWKEGATTSAVYGPGVTLHHAQFEATAVQWPAGTWMLEYGRGCIPSTIFFAMADSIFSTQDLWTVGKSIRAYGIAIVSEILQGNF* # PASA_UPDATE: g7283.t1, single gene model update, valid-1, status:[pasa:asmbl_6015,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 54808 56235 . + . ID=g7283;Name=g7283.t1 NODE_33_length_56540_cov_41.8554 . mRNA 54808 56235 . + . ID=g7283.t1;Parent=g7283;Name=g7283.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 54808 54871 . + . ID=g7283.t1.utr5p1;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 55069 55144 . + . ID=g7283.t1.utr5p2;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . exon 54808 54871 . + . ID=g7283.t1.exon1;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . exon 55069 55296 . + . ID=g7283.t1.exon2;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . CDS 55145 55296 . + 0 ID=cds.g7283.t1;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . exon 55451 55611 . + . ID=g7283.t1.exon3;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . CDS 55451 55611 . + 1 ID=cds.g7283.t1;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . exon 55941 56021 . + . ID=g7283.t1.exon4;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . CDS 55941 56021 . + 2 ID=cds.g7283.t1;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . exon 56207 56235 . + . ID=g7283.t1.exon5;Parent=g7283.t1 NODE_33_length_56540_cov_41.8554 . CDS 56207 56235 . + 2 ID=cds.g7283.t1;Parent=g7283.t1 #PROT g7283.t1 g7283 MRDTPTTVKTPSTAMRVLGVFKRDSSVSDRCALPSCGSSLGFFDKKITCRCCQNVFCSTHCSCIVRLNPSGTPDPEGEKYKVCFSCDEAYSKSLQAGKFTENKKVLARRLSIRSDKKDLVERNIIRQDSMSGVLDADLLL* # PASA_UPDATE: g7278.t1, single gene model update, valid-1, status:[pasa:asmbl_6002,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 44076 45662 . - . ID=g7278;Name=g7278.t1 NODE_33_length_56540_cov_41.8554 . mRNA 44076 45662 . - . ID=g7278.t1;Parent=g7278;Name=g7278.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 45623 45662 . - . ID=g7278.t1.utr5p1;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 45115 45128 . - . ID=g7278.t1.utr5p2;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . exon 45623 45662 . - . ID=g7278.t1.exon1;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . exon 44727 45128 . - . ID=g7278.t1.exon2;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . CDS 44727 45114 . - 0 ID=cds.g7278.t1;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . exon 44076 44365 . - . ID=g7278.t1.exon3;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . CDS 44298 44365 . - 2 ID=cds.g7278.t1;Parent=g7278.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 44076 44297 . - . ID=g7278.t1.utr3p1;Parent=g7278.t1 #PROT g7278.t1 g7278 MSKKVAKVKKEEQVISLGPQVREGELVFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVAARCKEVGVSALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL* # ORIGINAL: g7269.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 9760 16328 . + . ID=g7269;Name=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 9760 16328 . + . ID=g7269.t1;Parent=g7269;Name=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 9760 9912 . + . ID=g7269.t1.exon1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 9760 9912 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 10093 10370 . + . ID=g7269.t1.exon2;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 10093 10370 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 10662 10792 . + . ID=g7269.t1.exon3;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 10662 10792 . + 1 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 11057 11123 . + . ID=g7269.t1.exon4;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 11057 11123 . + 2 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 11435 11569 . + . ID=g7269.t1.exon5;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 11435 11569 . + 1 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 11883 11934 . + . ID=g7269.t1.exon6;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 11883 11934 . + 1 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 12156 12269 . + . ID=g7269.t1.exon7;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 12156 12269 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 12496 12624 . + . ID=g7269.t1.exon8;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 12496 12624 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 12842 12941 . + . ID=g7269.t1.exon9;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 12842 12941 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 13184 13705 . + . ID=g7269.t1.exon10;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 13184 13705 . + 2 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 13848 14555 . + . ID=g7269.t1.exon11;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 13848 14555 . + 2 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 14760 15352 . + . ID=g7269.t1.exon12;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 14760 15352 . + 2 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 15624 15744 . + . ID=g7269.t1.exon13;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 15624 15744 . + 0 ID=cds.g7269.t1;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 16225 16328 . + . ID=g7269.t1.exon14;Parent=g7269.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 16225 16328 . + 2 ID=cds.g7269.t1;Parent=g7269.t1 #PROT g7269.t1 g7269 MSECAKCGKAINLAGLKIKDRNYHSGCVVCHDCAKPLDSGIYDHNLQLCCQECYLNRVCNKCAVCLKRIEGEMMSSAERFYHVDCFVCFGCHKSLMDGEGFVEVDDKPMCPACAGLNCFGCRKTITEGDVFTFKNRQYHFECHKCAECQRALGNETAIEYGGKTYCEDDFKRLYPNVNVNLELNEAPRVRNPEDFDSLLEKDDMDERNDGAYTWLYEVSFGEAEAEVILRADGQEGGFLVHRSADRTKDYSLPLNVDGNTIVHLKIKTRGSEFSIGDGPAFRTVASLLEYYKRNQLADGKLLRMPVELEAPPLPNIQEGAPFYEEIVDFSKQLWLSRHVLTACSKLKDRYVDMGAASDPDAVHQVGDVAAAAQFKVTMLEKTLGDQKYMTASKFEDQDFFSDAVAVLDNTGVKQRRMSIFDHSFQRNRLSTVGSMTPSEIDEGDESLDLNDLAIEQRPEMHKMDELLKEIWQASGKIDLDGRMSRENYLRLAADLNPRLRPEAVNSVFKASKDLVRQGKLNGGFFFEQFVRLCKRVLNDPTVEMLFTKYAKSNPDCMTILEFKSFLRNEQKSADETESALSAFYKLAARAGSFGNESSDEALVYARQMFGKLGVSRDGNLTLAGLFSYISSEHNSVMSHTHSHTVHMDMTQPLSNYYIASSHNTYLEGDQLKSNCSVDAYKRVLQAGCRCIELDLWDGSKGEPVIYHGFTLTPKIKARDVLQTIAKFAFEASPYPLILSLENHLTPPQQIVFAKACRELLGNALVTSESNFWQSNPPVLPSPDQLKGKIIIKNKAHDSRDGGGEVKRGYRITKEMSDIVVYMRSVPAPALPPPEGLTRCYDVCSFFEKKAVKIIKKQPFDLCKYTAKRMVRVFPDGLRFDSSNPNPLPFWAVGMQMVALNYQTVDRPNELNEGKFLQNGRCGYILKPVQFRNDVSSSVIVSRTQLTIVVIQGYGLPTSRTSKKRIPDPYIEVEVCGVSTRICSTKAHDKTDSPVFNESFDFDVFVPEISLVRFVSYDEKTATAQATIPVDSLVPGYRRVTLKRLTPFGRSEPVEHAWVLVHVTIKPQK* # ORIGINAL: g7266.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 1102 3703 . + . ID=g7266;Name=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 1102 3703 . + . ID=g7266.t1;Parent=g7266;Name=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 1102 1140 . + . ID=g7266.t1.exon1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 1102 1140 . + 0 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 1342 1428 . + . ID=g7266.t1.exon2;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 1342 1428 . + 0 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 1604 1772 . + . ID=g7266.t1.exon3;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 1604 1772 . + 0 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 1944 1999 . + . ID=g7266.t1.exon4;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 1944 1999 . + 2 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 2240 2472 . + . ID=g7266.t1.exon5;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 2240 2472 . + 0 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 2743 2843 . + . ID=g7266.t1.exon6;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 2743 2843 . + 1 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 3109 3203 . + . ID=g7266.t1.exon7;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 3109 3203 . + 2 ID=cds.g7266.t1;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 3410 3703 . + . ID=g7266.t1.exon8;Parent=g7266.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 3410 3703 . + 0 ID=cds.g7266.t1;Parent=g7266.t1 #PROT g7266.t1 g7266 MSRPTEIEVNSASLVDLKAELFRKQEEFNRTKVTGIRNAAQKKVTPFARQNKGVESRAGKDAQSTVSIEEMDMLAESRRKLEAKSAAYERMKASGVNENDDDGERFLVDFQKKSWSEDRTRRSGSNSPPRRTISKTGSKEPQSGDGEPIAAEIGEWVEYTDSLGRTRRCPRAELDRLLEMDGKSRDHYDKSDELSDGADAKRRRIERDYDEDDGKPVGPVHYQHVLGNEIRDHGVGYYRFSTDEETRQDQMKELERLRQQTIESRVRRDRLKSKREEEKQARLDKIRAKRSAVASSSSDATIASGDMTVDAGAVGDASSRDTIVTMNPPLADHGVDADRQKILDYVRSLRPPAMKPP* # PASA_UPDATE: g7279.t1, single gene model update, valid-1, status:[pasa:asmbl_6014,status:3], valid-1 NODE_33_length_56540_cov_41.8554 . gene 46172 47826 . + . ID=g7279;Name=g7279.t1 NODE_33_length_56540_cov_41.8554 . mRNA 46172 47826 . + . ID=g7279.t1;Parent=g7279;Name=g7279.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 46172 46254 . + . ID=g7279.t1.utr5p1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . exon 46172 46281 . + . ID=g7279.t1.exon1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . CDS 46255 46281 . + 0 ID=cds.g7279.t1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . exon 46445 46486 . + . ID=g7279.t1.exon2;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . CDS 46445 46486 . + 0 ID=cds.g7279.t1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . exon 46697 46820 . + . ID=g7279.t1.exon3;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . CDS 46697 46820 . + 0 ID=cds.g7279.t1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . exon 47083 47160 . + . ID=g7279.t1.exon4;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . CDS 47083 47160 . + 2 ID=cds.g7279.t1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . exon 47329 47826 . + . ID=g7279.t1.exon5;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . CDS 47329 47399 . + 2 ID=cds.g7279.t1;Parent=g7279.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 47400 47826 . + . ID=g7279.t1.utr3p1;Parent=g7279.t1 #PROT g7279.t1 g7279 MEELQVPEESAFIVEEVTGIIKESVEALIGAAHYQHSKVGQWSSNVVELCLKRLTALNKPFKYIVTCVIMQKNGAGLHTASSCYWDNQSDGSCTVRWENKTMYCITSVFGLAI* # PASA_UPDATE: g7267.t1, single gene model update, valid-1, status:[pasa:asmbl_6010,status:3], valid-1 NODE_33_length_56540_cov_41.8554 . gene 5211 6979 . + . ID=g7267;Name=g7267.t1 NODE_33_length_56540_cov_41.8554 . mRNA 5211 6979 . + . ID=g7267.t1;Parent=g7267;Name=g7267.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 5211 5288 . + . ID=g7267.t1.utr5p1;Parent=g7267.t1 NODE_33_length_56540_cov_41.8554 . exon 5211 5345 . + . ID=g7267.t1.exon1;Parent=g7267.t1 NODE_33_length_56540_cov_41.8554 . CDS 5289 5345 . + 0 ID=cds.g7267.t1;Parent=g7267.t1 NODE_33_length_56540_cov_41.8554 . exon 5501 6979 . + . ID=g7267.t1.exon2;Parent=g7267.t1 NODE_33_length_56540_cov_41.8554 . CDS 5501 6829 . + 0 ID=cds.g7267.t1;Parent=g7267.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 6830 6979 . + . ID=g7267.t1.utr3p1;Parent=g7267.t1 #PROT g7267.t1 g7267 MGDKEGLEEPPPVLQPLLAVDERDSFGLPQFPDPNAPVPVKPLWLITTVAQLVALRVPGQSYRRFFIYYRIAVLSLFLMAIIIASIGMLNGVSILREQTSKVAYVAFQLSVMTFVPLWSTGYGLYYFASRPSDVEKTILMIEPEWLYLAPKLARRYTVVAAIFFAAQWIEMVTQSQILSLFTFDAGDFFKVSASTINIPKSLGRFSNVYLPFFYYLIVYTILLAIAISVRSYVVAFRCLTSQVHDVSNEIEVTQFVFEFRRWRNALSKTCAKTQHFLGPVLAAIFVGIVVSIFMSFQFSGFKKAEGASGVCMCPNGTIVSYSKGHLSFYDASSGYVGERDYSDDGISDALAVANEAAEDVQTRVFHMFLREAIRMAVFMMAPLMWIIYSAAELTALTESMLTEVNDRMEDERARTLLMPVWHLVQTPCKYTVYGVPFSKGLFKSIIVVVFSASSVVINNAI* # PASA_UPDATE: g7275.t1, single gene model update, valid-1, status:[pasa:asmbl_6007,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 30127 36982 . + . ID=g7275;Name=g7275.t1 NODE_33_length_56540_cov_41.8554 . mRNA 30127 36982 . + . ID=g7275.t1;Parent=g7275;Name=g7275.t1 NODE_33_length_56540_cov_41.8554 . exon 30127 30169 . + . ID=g7275.t1.exon1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . CDS 30127 30169 . + 0 ID=cds.g7275.t1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . exon 30368 30516 . + . ID=g7275.t1.exon2;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . CDS 30368 30516 . + 2 ID=cds.g7275.t1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . exon 30686 35302 . + . ID=g7275.t1.exon3;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . CDS 30686 35302 . + 0 ID=cds.g7275.t1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . exon 35621 36289 . + . ID=g7275.t1.exon4;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . CDS 35621 36289 . + 0 ID=cds.g7275.t1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . exon 36540 36982 . + . ID=g7275.t1.exon5;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . CDS 36540 36791 . + 0 ID=cds.g7275.t1;Parent=g7275.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 36792 36982 . + . ID=g7275.t1.utr3p1;Parent=g7275.t1 #PROT g7275.t1 g7275 MAERQPPSPAVDSGELLFLVLRYLESVKCDSAARVLRDHVDRNALLPRRHDCNGSSRAQTYAEMASNLRHVRPDHLSRLLETLVTAAEASRPLQLGINTLLGSGRYSLAGSLGTVSSVNGGVNSEGRSAASSALASVLRGGLRPPAVPVLGVHRAAVAGQYAGARAARGCARSLLASRLRLSFSTVGHLYASYCVAYDRTGLRIYTGADDHSIKAWCAVTGRLVGVFRGHVNVIADIAVDPENKLLASAGNDKMIRIWNLDTGATLAVLAGHVSQGVNMVSFAPMQGPVAVLVSCGSDGTVRVWHFSRETGRPVGSAEVFDIRFSARDKVMCLDMSTGGAFMAAGVTDGSVHVFQMDSPARDIAKLEGHKGKVSTVEFNPQDVCVLASGADDGTVRIWTRKCGEWESVTCHMIADVQGFAADGELLVCRRVPVTDPQGGVQAAAGNINNNNNNNNNHGNGGVDGQQNLAAASHVGLPRGAIRTADANPPTLASRGPSTITNAIAADVIASDSAAQGAAMNALSAASETRGDEDMSRADAVSDAVPQAADAQAQVQGVEAVVQPWEAEADEKRPGRVLMLRWTGDGAFLCVSSTDNLVRVYTRAGKLHRVLRGHRSSVYSLDAHPTDHALMLSAAYDGWVCVWDVVAGRRIAQHYLRDGVTKGPAMLLDIQWAPSGLAIATVDRLGCLTTFDCRENTDKLPRIPSSQFFQSEFRPLLRDAHHNVIDEATQRMPHLTEPGLLLDVLGFPHPPHLQWETRILEQQKRTPMDESVLASECSSTLNLRVAELAAFEEASRPRPAKAKGKGKDEARDAAAVQGKKKTAQGRARKLAPQIPLIDGESERAQTHSQSQSQSRIDHVADGEPAEDVSSASSSERDDLSSDFVMSSDEGGGRNGSGQGRARGRRAAARAAVAGMHTRPTRRTRRTAVMDGDDDDDFASLPPDGSSSDEEDVGAMEWQSDYSEGSDHPPRRARNGHHGNGSQQRAARSNARREGGGGHVNSGSQQRRRGRPLKAARAHSAVSANYLDDIESFLPTAWITGETAGAYWRYTPQMGDSVVYIPEGHVQYLAMLASDGIDVSKERADRKVFSESTVLCTVVGVKYEVGPPTRCRITLETTAVPVGVRASGAGASAPTVVTLLWHDLEGTADFIVLCDRFRAVCQCGLFEIGAAVNVRSRTDGSLSVGHVLAVGDVAGTPWNSVTVRFADQSTGHVCPWEIEHPVQRHPPPASIGGGASMGGASDDISASVSVSVAVSAPNPLDVPAVRDGVAKAIAECAKRRAAQWFGDAVDFAMYPAYLTVVAYPVDLGRIRRRVLGGYYRSVAALLWDVAMVERNAHIFNEAGSSICTDATAAVALVSSRVRTLTGGATTAAASNGGDGDINGSNAGVRISVDDDGDDHLGALADGPSSLPTTPVQSGGRAPLRLKLRMVSSGDSPVAVDALAARDMRSSTTAAARSQSDGSTAAVEKNGGGSHDVHGQSPGGDASQGVTEHTRSGRSLRRPVRRYFMDSFDDDTNGDDDDGDINGSDSGRTRQPKDVHNSRKRRRASVNAGDSSADDGVAEEDYPDIGNTALGAAQEAILEKHKLLMSRRIASQFLRPVPKSMKEYHAVIRRPMDLGTIKANIEDGAYRTLALYMADVRLVFDNCHEFNESDSEIYSHATQLWERHLAEVRSLQPRSRRVALRVRTDGIDEEDNASQRQRAPQQHQQQHRPARERRTASSENSPNKRVRRKKTKSLQPSLSDCESNASEESDDESDFEEAQHPRKRRRSSVNTGDSSADDGVAEEDYPDIGNTAFGAAQEAILGKHKLLMSKRIASQFLRPVPNSMKEYHAVIRRPMDLGTIKANIEDGAYRTLALYMADVRLVFDNCREFNEPDSEIYSHATQLWERHLAEVRSLQPDSLPSRRSARRS* # PASA_UPDATE: g7273.t1, single gene model update, valid-1, status:[pasa:asmbl_6012,status:3], valid-1 NODE_33_length_56540_cov_41.8554 . gene 25625 26898 . + . ID=g7273;Name=g7273.t1 NODE_33_length_56540_cov_41.8554 . mRNA 25625 26898 . + . ID=g7273.t1;Parent=g7273;Name=g7273.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 25625 25650 . + . ID=g7273.t1.utr5p1;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . exon 25625 25729 . + . ID=g7273.t1.exon1;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . CDS 25651 25729 . + 0 ID=cds.g7273.t1;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . exon 25907 26084 . + . ID=g7273.t1.exon2;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . CDS 25907 26084 . + 2 ID=cds.g7273.t1;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . exon 26509 26898 . + . ID=g7273.t1.exon3;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . CDS 26509 26800 . + 1 ID=cds.g7273.t1;Parent=g7273.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 26801 26898 . + . ID=g7273.t1.utr3p1;Parent=g7273.t1 #PROT g7273.t1 g7273 MSHPRAFYEQDNGQTSTGASALFNAIGNSKSLAGGFAGYMMKSMIVASSASVVFGLSTSMLFFGPMAPFAFLGGAGFGFVGGLVHRWNTDVRDAIQASEEFPELIEYHIRNLDPQFFSKQSYADWQAKLRASNIKARGTAITAYYSAAEAITDIRRRREAIIAERYSEMAAKTIVYGGADSD* # ORIGINAL: g7265.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 329 751 . - . ID=g7265;Name=g7265.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 329 751 . - . ID=g7265.t1;Parent=g7265;Name=g7265.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 590 751 . - . ID=g7265.t1.exon1;Parent=g7265.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 590 751 . - 0 ID=cds.g7265.t1;Parent=g7265.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 329 433 . - . ID=g7265.t1.exon2;Parent=g7265.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 329 433 . - 0 ID=cds.g7265.t1;Parent=g7265.t1 #PROT g7265.t1 g7265 MAPKQQGGEGSPSDPRRTAKVQKYTPAYKSPEDAPPSYMSLLGLVFGMFSMMMRVKWAAWVAMYCSIVHIATLKSSESDGRQMASSMM* # PASA_UPDATE: g7268.t1, single gene model update, valid-1, status:[pasa:asmbl_6000,status:3], valid-1 NODE_33_length_56540_cov_41.8554 . gene 7080 9059 . - . ID=g7268;Name=g7268.t1 NODE_33_length_56540_cov_41.8554 . mRNA 7080 9059 . - . ID=g7268.t1;Parent=g7268;Name=g7268.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 9015 9059 . - . ID=g7268.t1.utr5p1;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . exon 8961 9059 . - . ID=g7268.t1.exon1;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . CDS 8961 9014 . - 0 ID=cds.g7268.t1;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . exon 7911 8836 . - . ID=g7268.t1.exon2;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . CDS 7911 8836 . - 0 ID=cds.g7268.t1;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . exon 7080 7629 . - . ID=g7268.t1.exon3;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . CDS 7245 7629 . - 1 ID=cds.g7268.t1;Parent=g7268.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 7080 7244 . - . ID=g7268.t1.utr3p1;Parent=g7268.t1 #PROT g7268.t1 g7268 MSESDDELFGDGKVNSAMLPTDMASVLDPADSKSAPINDDSMCAVTGVSLQEKQLRWLIVAARVVGFMHPRSHVYRNRFICLRIITALCLLAGIVLFSMSTVSVAKRLRKTTDIAAFVLFQFCGSFATAVVSFSFGTYYWWQRPADIERIGTMVEENARHRIPIRIRRHILVLAALNILQWIDYIMATQFDTAYSRSSAASLQELRSDFHIPEWAVRLCEVLFPLIFYNVLYTMIATVAITIQFYVIAFRTLRSRVRDLTCSEDALAFMADYRMWRRSLSITCKKVQMYLGPMLLLVFVGLVMTIFLSFQLSGVIKKNNSGECPCFGSNGTFIHTNNTLPAPFGGDAQGSDKKDGVTADTFIRESVRLALFMMAPLLYFIYHASELTSSTDDILDEVNDKLSDRDLERVYRPVWHVVQTGAGFTVYGVTFSRELFMNIIIVIFSASSVVIHNAL* # ORIGINAL: g7270.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 17155 19537 . + . ID=g7270;Name=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 17155 19537 . + . ID=g7270.t1;Parent=g7270;Name=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 17155 17302 . + . ID=g7270.t1.exon1;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 17155 17302 . + 0 ID=cds.g7270.t1;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 17883 18143 . + . ID=g7270.t1.exon2;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 17883 18143 . + 2 ID=cds.g7270.t1;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 18485 18711 . + . ID=g7270.t1.exon3;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 18485 18711 . + 2 ID=cds.g7270.t1;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 18974 19537 . + . ID=g7270.t1.exon4;Parent=g7270.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 18974 19537 . + 0 ID=cds.g7270.t1;Parent=g7270.t1 #PROT g7270.t1 g7270 MSRRTGASDASPCGKCGASVSSRLRVCAKCKWPVGFPFTREDNSGARTSARPNERNVESNEQAAYEQRLLDRAIAVSGKQPGSGHGGGEVSYSSYHDYGDDGGVDDPYATTRNDFDYDPHGIPEQMDGGSHNYVEEDTQYRAPVQTAADGPASSRSGDSRSASRHIRRSSITNRDFGEDPKVIAVREAKREAYARELKQQMAENRKRKDAEKTEMEAYDMKDASFRSASVIASNQQPINGRRGAAPPAHESVDAVYATAAPSAAYASSQKAAAPAATQGKRTGGGGGGPSDSRPPVAPQQQQQAIQSLQQKYDSQKNAGGSGAVQSSYVSSGNGMDAASISAAIAHLSREIELLRVSVASSGGPVHAAVRDVLSKASLKGTLDCEHGCRKKIELKWHFG* # ORIGINAL: g7280.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 49219 51084 . + . ID=g7280;Name=g7280.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 49219 51084 . + . ID=g7280.t1;Parent=g7280;Name=g7280.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 49219 51084 . + . ID=g7280.t1.exon1;Parent=g7280.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 49219 51084 . + 0 ID=cds.g7280.t1;Parent=g7280.t1 #PROT g7280.t1 g7280 MRVMEHPGVYAPLLGTFPSIEKLSLRHVRSAHFVVAQQILAALGQSVQHLEYVSWHLFHPTQIASFLESQPAHIPSQLKSISFDNCRMGEEGPPGCDAGALGLLLGRIIAKSDRLEDVRIDGCELGDSNLASLFQAIARLPRESLNAISSIFVSNDAILWSSAAALASLLQIPVGPNAVAKQLNIARNGLCGDVANTVISALFPGNAHSPTEHTALNTVDATDPVISTTATTPPPPPLSVVAERTASTTSTTTTSVATETETPLASLISHVCLAHNPIGPAGTHALACGFGRLRHTPHPSSLSVLCLSYCLIDGNSLRVLLDALCESQSRITSIDLRTNPLGTAASSTLALFLLRYRHLAHLKVAECGLGHGGFDASFGKALSWTASSLVSLDLSGNRLGDDGCRIIADAIRERGVFCAAAVRSGARATGSVVEFQPVRLLRLAGNRLTSPAITYLGNAYVGVAESIATACIESNVSVRVDPIVTPETCCVSRRDITMHALRLVVGRGDSAESTTPDESHSPQNDGDGGVGGASPIGLVSDLLCLCDNLFTRTEAAAHMHTLGSCLGDAALLSTRANLLSWERLCLVGDFEARRESEGLSLSAAEGFDPGWGDMRPQQLPG* # PASA_UPDATE: g7272.t1, single gene model update, valid-1, status:[pasa:asmbl_6011,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 21975 24641 . + . ID=g7272;Name=g7272.t1 NODE_33_length_56540_cov_41.8554 . mRNA 21975 24641 . + . ID=g7272.t1;Parent=g7272;Name=g7272.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 21975 21984 . + . ID=g7272.t1.utr5p1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 21975 22198 . + . ID=g7272.t1.exon1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 21985 22198 . + 0 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 22432 22660 . + . ID=g7272.t1.exon2;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 22432 22660 . + 2 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 22846 22952 . + . ID=g7272.t1.exon3;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 22846 22952 . + 1 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 23117 23304 . + . ID=g7272.t1.exon4;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 23117 23304 . + 2 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 23453 23580 . + . ID=g7272.t1.exon5;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 23453 23580 . + 0 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 23679 23748 . + . ID=g7272.t1.exon6;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 23679 23748 . + 1 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 23882 24118 . + . ID=g7272.t1.exon7;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 23882 24118 . + 0 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . exon 24353 24641 . + . ID=g7272.t1.exon8;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . CDS 24353 24625 . + 0 ID=cds.g7272.t1;Parent=g7272.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 24626 24641 . + . ID=g7272.t1.utr3p1;Parent=g7272.t1 #PROT g7272.t1 g7272 MLRTHSLLDSVHAAVEPLDLEDAGSYDRLIHMMGNARVVLIGEGTHGTHEFYAERARLTKRLIEEKGFNAVAVEADWPDAHRVNRFVRGISADHTAAEALSDFERFPTWMWRNEVVADFADWLRIHNDATSAPGGKGKAGFYGLDLYSMFSSMTHVIQYLDKIDPAAANRARRRYSCFDQYEEDSQEYGMSACFGLGPSCETDVINQLRDMQRIAVKHGYDFSSAEYDGGDATMQDASSGPSEGSQAAPADASGMDNFFDASENAHLVRDAEEYYRSMFQSNVNSWNIRDKHMFQTLRQLMMYLDKKENNAKIVVWAHNSHLGDARATDMSLRGELNLGQLCKEQFGRDCFILGQTTYHGSVTAAPSWGAQAHRYGVRCGLPNSVEELFHKLRVPAFMLDLRPGTDGAMALSGQRFLERAIGVIYVPKTERQSHYFRTSIENQFDTVLHFDKTHALVPLERTHKWNVGEAGFEMETYPSGL* # ORIGINAL: g7274.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 27443 29410 . - . ID=g7274;Name=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 27443 29410 . - . ID=g7274.t1;Parent=g7274;Name=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 29274 29410 . - . ID=g7274.t1.exon1;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 29274 29410 . - 0 ID=cds.g7274.t1;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 29022 29173 . - . ID=g7274.t1.exon2;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 29022 29173 . - 1 ID=cds.g7274.t1;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 28617 28809 . - . ID=g7274.t1.exon3;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 28617 28809 . - 2 ID=cds.g7274.t1;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 27443 28289 . - . ID=g7274.t1.exon4;Parent=g7274.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 27443 28289 . - 1 ID=cds.g7274.t1;Parent=g7274.t1 #PROT g7274.t1 g7274 MHRSTLDFDRACFKEVAAKIYVHLLPRYISNIEAGVDEHLNSQLMKFSEELGGIVLAYHDVNLLQKCGTIIAEYPYIHFYVGVKLTVFTPVVGKRLVGTVNKMGVDYIGMLIFGLFNASVPKEAMRNDIVYDEGMGCWYDNASPGNGVINIGAEVTFTVTRLETVNDVLAISGSILGENAGLRRAAPDANATATATATPRKEKKRKHRDDDAIDTTADVTGKVDADVTAADDEPPSKKQKKDKKDKKDKKDKKEKRERRDSTIDPTPPATTDVEMASDDGYEAVTAAPLAAHSKTSSKSHVTMAAAPVATAVASKKDEKKAPKPSKSSSKSAKELSEHSGIVAVAAAALLPPASKTTHASTVAVTATDAKKKKKDVTHAAADEDVIIAAPALVTATPALSAEPAAKEKSRSKKSKATDIVVVESKDTKGSKAVGVVVVRRCF* # PASA_UPDATE: g7277.t1, single gene model update, valid-1, status:[pasa:asmbl_6013,status:3], valid-1 NODE_33_length_56540_cov_41.8554 . gene 39453 43789 . + . ID=g7277;Name=g7277.t1 NODE_33_length_56540_cov_41.8554 . mRNA 39453 43789 . + . ID=g7277.t1;Parent=g7277;Name=g7277.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 39453 39611 . + . ID=g7277.t1.utr5p1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 39453 40068 . + . ID=g7277.t1.exon1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 39612 40068 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 40271 40860 . + . ID=g7277.t1.exon2;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 40271 40860 . + 2 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 41232 41342 . + . ID=g7277.t1.exon3;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 41232 41342 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 41471 41623 . + . ID=g7277.t1.exon4;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 41471 41623 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 41948 42100 . + . ID=g7277.t1.exon5;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 41948 42100 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 42356 42538 . + . ID=g7277.t1.exon6;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 42356 42538 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 42781 42891 . + . ID=g7277.t1.exon7;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 42781 42891 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 43104 43215 . + . ID=g7277.t1.exon8;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 43104 43215 . + 0 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . exon 43470 43789 . + . ID=g7277.t1.exon9;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . CDS 43470 43594 . + 2 ID=cds.g7277.t1;Parent=g7277.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 43595 43789 . + . ID=g7277.t1.utr3p1;Parent=g7277.t1 #PROT g7277.t1 g7277 MASAAPYSASAGGASSLRWDSAPSTESTAAASHTDTYRRPPVTADAIAAEYREAARVLREGQSPRSGDAARNIRSPEAQPAPRLIRSPDARPELRSTQSLSMYDRDLTGGLSRPSSADAAVPTTPNSRNGEAFASPAPGWRSEYKGISQPLFDNLPATPSGVTKQSDILRKYENVTWATPQRVPDGAIGRLGLESPRGLESSKLQQTLDKGRAILDRQRQQMQQAHQYTAGGTDIPAHGTTHGTSSPPSRQYDPHVSDLVDKDAEFFKRRWLSSPDVSVAIAPDAPASSLYSATGGNARGGASRGMTHVSSSASVGSSSSGVAGGSVLASQRSVDEAFDFNAVLDARVKERQMQLSLVEREYQEMLRQRDEQLKLLEMKVSGLSRAMNEREERLATLEARLRATSQARDTAEDALRTARDDIKQLPKREHYEEAMKKNAELRDMCGELQRVLTLKMAEVEEAQDQVQRQVEAMAALRQSIRTNEATQAAAEAERKDTYLRKLVGDLESRDALIREMEDRLRRAEADAVAAGEVAKQQRTIDKMRTSMKTLVDENQSLIEENTSLRQLCDSAAFRNSTPGMERLEQLLAASLSQIRALSQLCTVVSQGGTPNVNLLLGLEDAPRAEGRQNPISVAENIQREIERLRGFISDRYAEEMGKHACAVQ* # PASA_UPDATE: g7281.t1, single gene model update, valid-1, status:[pasa:asmbl_6003,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 51511 52061 . - . ID=g7281;Name=g7281.t1 NODE_33_length_56540_cov_41.8554 . mRNA 51511 52061 . - . ID=g7281.t1;Parent=g7281;Name=g7281.t1 NODE_33_length_56540_cov_41.8554 . exon 51978 52061 . - . ID=g7281.t1.exon1;Parent=g7281.t1 NODE_33_length_56540_cov_41.8554 . CDS 51978 52061 . - 0 ID=cds.g7281.t1;Parent=g7281.t1 NODE_33_length_56540_cov_41.8554 . exon 51511 51846 . - . ID=g7281.t1.exon2;Parent=g7281.t1 NODE_33_length_56540_cov_41.8554 . CDS 51520 51846 . - 0 ID=cds.g7281.t1;Parent=g7281.t1 NODE_33_length_56540_cov_41.8554 . three_prime_UTR 51511 51519 . - . ID=g7281.t1.utr3p1;Parent=g7281.t1 #PROT g7281.t1 g7281 MSKGRAPALKRLASEFLKMEIQEGEHDSVIDARVAMALYRQHAKEWEATLRAKFLHGAKAAASADKKGALDTDAAKAAKVANDMSTMGSEGQVMLSSRRSKGALEDSANAKKDKAAEKDAKMTQRRKFYNKLNRRY* # PASA_UPDATE: g7282.t1, single gene model update, valid-1, status:[pasa:asmbl_6004,status:12], valid-1 NODE_33_length_56540_cov_41.8554 . gene 53119 54213 . - . ID=g7282;Name=g7282.t1 NODE_33_length_56540_cov_41.8554 . mRNA 53119 54213 . - . ID=g7282.t1;Parent=g7282;Name=g7282.t1 NODE_33_length_56540_cov_41.8554 . five_prime_UTR 54206 54213 . - . ID=g7282.t1.utr5p1;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . exon 53879 54213 . - . ID=g7282.t1.exon1;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . CDS 53879 54205 . - 0 ID=cds.g7282.t1;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . exon 53621 53706 . - . ID=g7282.t1.exon2;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . CDS 53621 53706 . - 0 ID=cds.g7282.t1;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . exon 53119 53443 . - . ID=g7282.t1.exon3;Parent=g7282.t1 NODE_33_length_56540_cov_41.8554 . CDS 53119 53443 . - 1 ID=cds.g7282.t1;Parent=g7282.t1 #PROT g7282.t1 g7282 MKTNVGSGGKPKARAAGAASASSPASAGIVGKKYKKKSMLGKRKPSPTVAVAAGKEAAAASVKADGDKSKKSKITAAKKAASTVKKAMPAVKMPKKPEEMSSNWKALFAQIPHGSKKRKRDLSDKTDGNGAKRGRFDRKPAGNVAAATEPPKEIWFDGVDVADIAAAEGVNVDVVAKRMGGGKASASSTVHPNASTTAAAAAVGSADGSGPARSPGSSLNRLITGHITEWVAVNLCQWLNSVGAD* # ORIGINAL: g7276.t1 original gene structure, not modified by PASA NODE_33_length_56540_cov_41.8554 AUGUSTUS gene 37728 39213 . - . ID=g7276;Name=g7276.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS mRNA 37728 39213 . - . ID=g7276.t1;Parent=g7276;Name=g7276.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 38366 39213 . - . ID=g7276.t1.exon1;Parent=g7276.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 38366 39213 . - 0 ID=cds.g7276.t1;Parent=g7276.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS exon 37728 37968 . - . ID=g7276.t1.exon2;Parent=g7276.t1 NODE_33_length_56540_cov_41.8554 AUGUSTUS CDS 37728 37968 . - 1 ID=cds.g7276.t1;Parent=g7276.t1 #PROT g7276.t1 g7276 MRLPQSLSIIGPALVCIISAVLLGHCAASANGAQYSVTVVSIDESPVLSSLDGTSKFTQNFNPSWIAPSDSLPGLEYGGLFVRCQNCSDGRQNCPGSASPSVIAFARALDRSGVKFAPIDASTIAFSPSESVKEETWGTEDPRVAVDPHTGEYHLFYTAYAGGIAPGGGDYVKLHHAVTKTPSVRDSWTRLGAVFPELPNSKSGALLVRKSPPHYLFWGDSSITVATTDDLVVFTNQKVIVAPRSDGFDSVLVESGPPPMELSDGNILFVHNSADATNAYHVGWVILNGTDPTEVLARSASPLLSPTLPWEEGTAPFLSNVPNVVFLEAMRRSPSGTPDEFQVWFGGADAVVGTATIRVTLV* # PASA_UPDATE: g6615.t1, single gene model update, valid-1, status:[pasa:asmbl_5553,status:12], valid-1 NODE_3095_length_4332_cov_39.7506 . gene 2385 4288 . - . ID=g6615;Name=g6615.t1 NODE_3095_length_4332_cov_39.7506 . mRNA 2385 4288 . - . ID=g6615.t1;Parent=g6615;Name=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 4228 4288 . - . ID=g6615.t1.exon1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 4228 4288 . - 0 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 4027 4125 . - . ID=g6615.t1.exon2;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 4027 4125 . - 2 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 3605 3783 . - . ID=g6615.t1.exon3;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 3605 3783 . - 2 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 3072 3158 . - . ID=g6615.t1.exon4;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 3072 3158 . - 0 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 2684 2845 . - . ID=g6615.t1.exon5;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 2684 2845 . - 0 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . exon 2385 2560 . - . ID=g6615.t1.exon6;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . CDS 2501 2560 . - 0 ID=cds.g6615.t1;Parent=g6615.t1 NODE_3095_length_4332_cov_39.7506 . three_prime_UTR 2385 2500 . - . ID=g6615.t1.utr3p1;Parent=g6615.t1 #PROT g6615.t1 g6615 MPRIVALWVYVSSHHHCESVSNDLVESEEEDDPSTVDDVSEPDDDIEEEEELTRFYNNVKDTVMSGITEKIVTDNQSLEINATRHAYNISQQEVLSSVVVAHFDVAIEKGSLAVFASPSQKALLKKYSFDQVNEDQLLNDIRNFLVGRRELLHSRLPTIKNPLMRIMHVLYDLDVISEEGIRKWFASLDVAWIKEDVGHLIEWLDEAEEESDDDD* # PASA_UPDATE: g6614.t1, single gene model update, valid-1, status:[pasa:asmbl_5552,status:12], valid-1 NODE_3095_length_4332_cov_39.7506 . gene 757 2178 . - . ID=g6614;Name=g6614.t1 NODE_3095_length_4332_cov_39.7506 . mRNA 757 2178 . - . ID=g6614.t1;Parent=g6614;Name=g6614.t1 NODE_3095_length_4332_cov_39.7506 . five_prime_UTR 1980 2178 . - . ID=g6614.t1.utr5p1;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . exon 1899 2178 . - . ID=g6614.t1.exon1;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . CDS 1899 1979 . - 0 ID=cds.g6614.t1;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . exon 1236 1559 . - . ID=g6614.t1.exon2;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . CDS 1236 1559 . - 0 ID=cds.g6614.t1;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . exon 757 1014 . - . ID=g6614.t1.exon3;Parent=g6614.t1 NODE_3095_length_4332_cov_39.7506 . CDS 757 1014 . - 0 ID=cds.g6614.t1;Parent=g6614.t1;3_prime_partial=true #PROT g6614.t1 g6614 MATNPASDPPSDEEEFHDANAYDGIEEPSSSKEDIGDEDEGFDPALAARAAESVRTGVDGEGLPVGLGMTANEIRKGFGLFFENKQPEAEKFFEQYKESVPVFALGFASLQVMRAVMTFEQPDMERAMRCLKETEALANAASLNENKLTQWARYMVGRKQEKTSEKIHNTIMCAESRLLIGVLQFFSESILQFIKGGLNIRGAWKIYERMFQIYEKNQVEL # ORIGINAL: g13145.t1 original gene structure, not modified by PASA NODE_4123_length_2149_cov_43.7932 AUGUSTUS gene 219 494 . + . ID=g13145;Name=g13145.t1 NODE_4123_length_2149_cov_43.7932 AUGUSTUS mRNA 219 494 . + . ID=g13145.t1;Parent=g13145;Name=g13145.t1 NODE_4123_length_2149_cov_43.7932 AUGUSTUS exon 219 494 . + . ID=g13145.t1.exon1;Parent=g13145.t1 NODE_4123_length_2149_cov_43.7932 AUGUSTUS CDS 219 494 . + 0 ID=cds.g13145.t1;Parent=g13145.t1 #PROT g13145.t1 g13145 MIGSAVTLCRTGSRTNYYSSCVPCVIKYCGMPVDRFLLFFPQWDISVEPRNPAEDMLIQPPTFKLKTGKLQPPLPHIVDPADLDKVRPPDL* # ORIGINAL: g3298.t1 original gene structure, not modified by PASA NODE_1506_length_10854_cov_43.7009 AUGUSTUS gene 5406 6875 . - . ID=g3298;Name=g3298.t1 NODE_1506_length_10854_cov_43.7009 AUGUSTUS mRNA 5406 6875 . - . ID=g3298.t1;Parent=g3298;Name=g3298.t1 NODE_1506_length_10854_cov_43.7009 AUGUSTUS exon 6844 6875 . - . ID=g3298.t1.exon1;Parent=g3298.t1 NODE_1506_length_10854_cov_43.7009 AUGUSTUS CDS 6844 6875 . - 0 ID=cds.g3298.t1;Parent=g3298.t1 NODE_1506_length_10854_cov_43.7009 AUGUSTUS exon 5406 6615 . - . ID=g3298.t1.exon2;Parent=g3298.t1 NODE_1506_length_10854_cov_43.7009 AUGUSTUS CDS 5406 6615 . - 1 ID=cds.g3298.t1;Parent=g3298.t1 #PROT g3298.t1 g3298 MVVWLVLWPAPHGGGDNGADTADWPFVNSEAQGTSKGYGGGRRCYGYDHGAESETDAHVLVQLDVGGVFMTTRRGTLLRFDNTTRNFFHRALYSEEEEADGLDQRPHPPIFVDADPKDFEVVLNNLRQGTTATTDFSMPNGNRLSPLSLVSLSRSLGLGIPGFQIAIALQRPRWAPPQLGGMYVSIESSKNALNYVFLSADDEESGDISGRVFVVSPQGQPTYGTYLTRVGGLTQVSLLQSSPRSGVSTHHIYSTDLYMTRLGYPTECGEADYSGWRRYHTSKLATSTCMSPLIFRQFRSPERGFVYTCTIMCPGALSVVFSSNLRAAVMTFCGGSGCESHNLTVESMPSFVLKIHGHPCFPHDSVLLSFGKQLMLLNPSLADGQIRQCATAAVSADYSYPLYSSPTELFSSY* # PASA_UPDATE: g3297.t1, single gene model update, valid-1, status:[pasa:asmbl_1810,status:3], valid-1 NODE_1506_length_10854_cov_43.7009 . gene 177 4143 . + . ID=g3297;Name=g3297.t1 NODE_1506_length_10854_cov_43.7009 . mRNA 177 4143 . + . ID=g3297.t1;Parent=g3297;Name=g3297.t1 NODE_1506_length_10854_cov_43.7009 . five_prime_UTR 177 435 . + . ID=g3297.t1.utr5p1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 177 974 . + . ID=g3297.t1.exon1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 436 974 . + 0 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 1183 1472 . + . ID=g3297.t1.exon2;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 1183 1472 . + 1 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 1655 1739 . + . ID=g3297.t1.exon3;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 1655 1739 . + 2 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 2007 2070 . + . ID=g3297.t1.exon4;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 2007 2070 . + 1 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 2334 3326 . + . ID=g3297.t1.exon5;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 2334 3326 . + 0 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 3486 3735 . + . ID=g3297.t1.exon6;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 3486 3735 . + 0 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . exon 3890 4143 . + . ID=g3297.t1.exon7;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . CDS 3890 4059 . + 2 ID=cds.g3297.t1;Parent=g3297.t1 NODE_1506_length_10854_cov_43.7009 . three_prime_UTR 4060 4143 . + . ID=g3297.t1.utr3p1;Parent=g3297.t1 #PROT g3297.t1 g3297 MAAPGSISDMHVFSTRNNAHTRVNEDAGSENGIQSSLHDSGYGEAHARSPGLAVPSRDGATSAVQSASGESARQKNPCESTIDVDSVHASAVGRIKLVTQGLAPLVDRIEDKLHASLGHVHDDADDAQHEEEDRAEAEFLKQAQEASKKRLEMRVKVEAASVHELEAFSFEQAALLDKMRSLQTVIYNLEEARALATAGRLRLNNKRDTFEQKIAQLESRQQIERRQLAETQEREKEMTRAMLEIERSVGNQRSQKEQGLMDSLIASQLQISQKKRAEQLRESQLMEQKHMRTEFEVSFRETEGREELLAQQKVEILTLIATQKKEFETETQRIEEKHQALRALQLVETQRLQAVQLQAAQRLQTRELLRMQRHQARIRKRARAAERANAASDTDQSGDESSLDKSSSTHSTHSTHSVTSYGTSCEGTRDDLGGEIGQTDAAADALVRENSAKNAASELRESVESQQASEMTARVATDREGLLTLQKRHLSVLEDNRKLHKEDICAYDTDAATRMAEVHRMHEEETKNMRSQHASESQVLAEMHADERRILTETSAAHRRIEDALMAERRLSDRILYHRVPKEIGARLAVGRRVDPVTYSHVTVLCCMVRVVSRAPEGPDGVSGGVERADATQFTASVNMLMESLNDVVARTSGVFTVDSAGDAIVVASASTSASDAQACANTIVRLALEMQSAGRNTIADGKTHSGLQLYMGVGSGSAVAAVVGTTIPQYCLFGEPVTTARRLATTTARDGGITICNATRLAVKKVDEKAVYRLEKDGAKEDADPDVYRVSVDSN* # PASA_UPDATE: g3299.t1, single gene model update, valid-1, status:[pasa:asmbl_1809,status:12], valid-1 NODE_1506_length_10854_cov_43.7009 . gene 7464 10593 . + . ID=g3299;Name=g3299.t1 NODE_1506_length_10854_cov_43.7009 . mRNA 7464 10593 . + . ID=g3299.t1;Parent=g3299;Name=g3299.t1 NODE_1506_length_10854_cov_43.7009 . exon 7464 7515 . + . ID=g3299.t1.exon1;Parent=g3299.t1 NODE_1506_length_10854_cov_43.7009 . CDS 7464 7515 . + 0 ID=cds.g3299.t1;Parent=g3299.t1 NODE_1506_length_10854_cov_43.7009 . exon 7661 10593 . + . ID=g3299.t1.exon2;Parent=g3299.t1 NODE_1506_length_10854_cov_43.7009 . CDS 7661 10593 . + 2 ID=cds.g3299.t1;Parent=g3299.t1 #PROT g3299.t1 g3299 MPPRARIRKHDGRDGDSAKRKRKLSDDDDARFFDREWHPSGRSSSHPLFDASSVAAIEAAIVSATRGCLSPTDSEMLSLLPSITNAHPKTHRKAMRAWISDAIVALLDSMERAEHVIAHRSMLRVAMDILPGDVSDACTKSYDMFEVRPPRMLGLERRHLETLKRRSGLYCVGIANGSPLGFSLSLQRPDHRAVATGDVIVAACLEGTFVTHGLPAAELLYVDVVDSASSLPVCMGAVSFASSGNDITAATGDAKGKKAAEDHAGEAAAGSSSSTSVRVFKLYLNRHACERLTTGKLSLTFSLNPMSIVAAGISPDRIVSGDFNASDVSDRWVSFLDYSTLIERRSSMDLDDAVAQHASGGNGGTSGVSSGHTMPFRLATWTRDDGNRYAAANAMYLRCRAMVQGVRCDDPEAPAKLLDVFAGSNSFDESLARELRSILVADAVHFSRPQYVPALVATVPLNPEDIEDCVVMIDEALAAGTEAQALMGPLGTDGTPLAHAHAHHHHHHHHHHHPHPASRGASAGRGARGAAGAMGAAGGDLAGARGGDSGRRGSAGAGGSGDPAASLDNADDSDDSQYEDMDEDGSEGSWDHSHYEGADDDMFDDDDMSDDVDMGSDDNEMDYAFGSNSRRSKRRSEHDCVWRSEQAEASRPSVGFFEAMPVVDTPPDAHAASCPHANCAVHGTASGRGDASRPSSVQPPPSHAGEAARDLPVDMHGDTDAHAPTPSDPTVTRASSAPSGGSHSGIASMRRWPVLRRTWPDRLPTRDLVAPILKEVRDGGLLELVLTFQDDNGPIIHGLINRRCGALAFSLLQDPHSDVYEVVDDLGNTVAHACTISGDAEALSAVVEARGQDVLWMENVSKCTPLTEFFGVDFVTADAQGHVGPTMLLDTRWREVMQYYIRSTSEWSRAFAVAVCDVIQKITFGERFTSDEGATILANALDTPQVVELCTALWSEALDRMESCFSILAMQVRVRARMCVCVCMYMFMLVRKSI* # PASA_UPDATE: g10772.t1, single gene model update, valid-1, status:[pasa:asmbl_9621,status:12],[pasa:asmbl_9624,status:12], valid-1 NODE_83_length_43100_cov_40.874 . gene 20593 24340 . + . ID=g10772;Name=g10772.t1 NODE_83_length_43100_cov_40.874 . mRNA 20593 24340 . + . ID=g10772.t1;Parent=g10772;Name=g10772.t1 NODE_83_length_43100_cov_40.874 . five_prime_UTR 20593 20644 . + . ID=g10772.t1.utr5p1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 20593 21304 . + . ID=g10772.t1.exon1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 20645 21304 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 21468 21671 . + . ID=g10772.t1.exon2;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 21468 21671 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 21935 22207 . + . ID=g10772.t1.exon3;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 21935 22207 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 22476 22760 . + . ID=g10772.t1.exon4;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 22476 22760 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 23147 23290 . + . ID=g10772.t1.exon5;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 23147 23290 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . exon 23501 24340 . + . ID=g10772.t1.exon6;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . CDS 23501 24184 . + 0 ID=cds.g10772.t1;Parent=g10772.t1 NODE_83_length_43100_cov_40.874 . three_prime_UTR 24185 24340 . + . ID=g10772.t1.utr3p1;Parent=g10772.t1 #PROT g10772.t1 g10772 MAESELIHRKGRHAESEGVRSPKAADAPSSHKHVDETLAFADNSEDGNVTSPVKADEAKSEEVKETSLGSASIVDAKEEEDKETPTSPTSEGLKKRKVKAGEKDAEAVTPGSPKSPGAKKDAKKDAKKDAKKEETKDSGETVTSRKEDAKGKGTVENVASGAVKGAGEAQEKVDKDKLHADVASAPVHARSRGLHPCVALAVSMFVFFLGTFMLSDTGTMDDTKLPEAVRHHLDHGVVVPVFVGEQKLRIFARIDGPRDASEVVLLVHGLPASSYSYRNVLPELASRGIRAVAFDFPGFGLSHRPADAPYTWAYFASVIPAVADSLNLPAVHLVCHDIAGPICAQYAIKSPTRVRSITFTNTFLNTKGSGAGFPMSTMAQHPSIGKHTLSFLSSPAGLPLAWLLLRRSASSSISFSDAHAYMHLITRSDGGAAFLKTLGGYNASAEHSTFLADGLKTISETMPMQILVATRDTVPHNGEQVDYLAKAVPKCAVKWMVGRHVLQEDHPHTFASYVADFIRELPATPPRPPLEDFVSEEVRREFEHDGASATVAGGAHSHSHGGHSHGGHSHGGHSHGGHSHGGAAQAQQPPRADTQATEAQQPPRADTPATETQQPSRAEAAQVQPNADLPVAAKVESGSDGGHSHSHAGAQAQPHSHSHSHGHDEGHVHSHKKHKDAEPHSHSHSHSHGKNDAHTHDNVHTHSHGKHVDSHSDTHSHGKPDAHSHDHPHHEKREKDKYKRPADHGQAHP* # ORIGINAL: g10769.t1 original gene structure, not modified by PASA NODE_83_length_43100_cov_40.874 AUGUSTUS gene 10099 12314 . - . ID=g10769;Name=g10769.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS mRNA 10099 12314 . - . ID=g10769.t1;Parent=g10769;Name=g10769.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 10487 12314 . - . ID=g10769.t1.exon1;Parent=g10769.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 10487 12314 . - 0 ID=cds.g10769.t1;Parent=g10769.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 10099 10265 . - . ID=g10769.t1.exon2;Parent=g10769.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 10099 10265 . - 2 ID=cds.g10769.t1;Parent=g10769.t1 #PROT g10769.t1 g10769 MLTVRTYVSGKLLLSFTLDGQTKLLQRSSDETIRRTLRRIEMSLLSKRDQKLMKKKPTPGPDFVVTVGTVAESRRQEDDADELSPDTQLLDAHGCPVPHDTANHAAWHHGGVVKFGGRSLEIERDPPTISSLSIVARPLVGIPIYPVITSESVDLSLSKFEWFRRSSPDAPVGIAKEDSSSKAKQKLAEPVEIDAPLWEPCGVGCVYKPTVEDVGRRLALRCTPSSNRMEWMGPHAVAVTSTPVEYIPDSLPFQRRQQKYLGDSFSQDGKNLRVITYNILADALATTEYAMSTLFPYCAYRFLDPDYRKQMIATELVGYRGDMVCLQEVGPKEFDYLTHVLGNNGYAGLYAMKKGSNTDGCALFYRRGRLEVVGNPKSFELASCVEDARYEPLMELFYGSNHSLRRITKSRTTVVQFVALRDLSRAEDANNVVIVANTHLYFHPEADAIRAVQLAIVACEAARFRSDAFGAESMSRVGLLLTGDLNSRTASMATRLLRHGRTQVDWVADLLRLRARFTSAFQSIVTSNDSTHALTFPSPSNGGNTVATKEAEDGDARLSDTALQAEAAELAGRVAALEDIGRMVGVPLPLRFDLASGTPAFTNFVPTFAEALDHVLVDAGGPLESCDNAVPIPPIEEITAETALPSSVFPSDHLAVICEVRWMQ* # PASA_UPDATE: g10770.t1, single gene model update, valid-1, status:[pasa:asmbl_9620,status:12], valid-1 NODE_83_length_43100_cov_40.874 . gene 12972 17501 . + . ID=g10770;Name=g10770.t1 NODE_83_length_43100_cov_40.874 . mRNA 12972 17501 . + . ID=g10770.t1;Parent=g10770;Name=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 12972 13578 . + . ID=g10770.t1.exon1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 12972 13578 . + 0 ID=cds.g10770.t1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 13701 13867 . + . ID=g10770.t1.exon2;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 13701 13867 . + 2 ID=cds.g10770.t1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 14073 16073 . + . ID=g10770.t1.exon3;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 14073 16073 . + 0 ID=cds.g10770.t1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 16272 16421 . + . ID=g10770.t1.exon4;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 16272 16421 . + 0 ID=cds.g10770.t1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 16665 16835 . + . ID=g10770.t1.exon5;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 16665 16835 . + 0 ID=cds.g10770.t1;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . exon 16986 17501 . + . ID=g10770.t1.exon6;Parent=g10770.t1 NODE_83_length_43100_cov_40.874 . CDS 16986 17501 . + 0 ID=cds.g10770.t1;Parent=g10770.t1 #PROT g10770.t1 g10770 MASNAVSATRVGDFFATKDLLVTGSTGFLGKVIVEKVLRSIPNVGRLYLFMRPSTKDSTEKRFDEFLASPIFDRLRAERSGFDEWARSKLVLVQSDLTAGKNLGVAPSVVEELSANVAIVLHCAATVDFNERLDAACKINVLGTIELLAMAKKFRKLEAFVHVSTAYVNSNLADGVVNEQIYPMTFGDPAAIVEAILKSSEKEIEALTARVLTQYPNTYTFTKSLAEHMLQRHRGNVPIAFVRPTIIGCSAVEPVPGWIDAISAAAACLLFCGMGIITAFPGSGDNIADLIPVDHVSNLILVAAARVGTPASENPLENSDRPIPIYHSGTSERNPVDWELVAQATVTYWRLNPTPKRIADPSMLLIGNDFLFQTQFFLSYDLTSMLYSMFAAMQMGTNPNASKTARRLKKMTQRARSLANTFRHFVSHEWIFDASGAKSVREGFVSRADIDGYPIDEQSIHWPSYIATFCYGLQRFVLKERARQPSNAPPFECLISEDPRASGLSKRYPDVTFAMRSRRDLPRYKEVKPLTPSMYVDRVLISEGVRTVIAQLVADGVESQDAASRRARAIATRMAHTMSETSVRAFGFALRKIIRRLYKHVLVDTSRMEELRRAMEAGPVVLMPTHRSYLDFLILSYVMFSLDMPVPVICAGEDFLGMGVVASLLRNSGAFFIRRSFGDDSLYKAIFGEYVRLHVERPSHPIEFFVEGTRSRTGKSLRPRIGMLSLVAEPVMEGTVPDVRIFPVGISYDRIVETNLYANELMGVPKPKESAGALVRARSVLSRSLGRIHVRMSEPISVRDALAGRVDRARLTLLPRELAPGRLATTVQRLSQSGSSQPALAKSVLAEAASQSKAFTAAISDLSHEILRRQQSQLVATAPAIVAAVVLNWARAFPGESLPPNALSRECNFVRRELESRGFMVDWAEFEDDKSIIAGGIELMAEYLHVDGEGFVRAATDSAASGRENAIVLANWRNQLLHPFAADVTVVLAIRLAGDGTLNHISVAVDKVEKAYAFAASLLSHEIVGIERNVSQTFAATVKTLSAKGVLCVTEGGHITVPHAGRHLIDFLSGLITPIIDSYWGAALHLFGMLHPTAARPLSALVTDTQKELRALYATGKLRSPEALSSDPIKNAFHSFRDLDLLVHVRAEGLATEHLPYQLAPRHLTDRRELMHIYNSIVKMQGEGRGSDVPPERLLQSAAAAKL* # ORIGINAL: g10776.t1 original gene structure, not modified by PASA NODE_83_length_43100_cov_40.874 AUGUSTUS gene 42810 43100 . + . ID=g10776;Name=g10776.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS mRNA 42810 43100 . + . ID=g10776.t1;Parent=g10776;Name=g10776.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 42810 43100 . + . ID=g10776.t1.exon1;Parent=g10776.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 42810 43100 . + 0 ID=cds.g10776.t1;Parent=g10776.t1 #PROT g10776.t1 g10776 MTPSGNDNDNDNDNDNDNDNDNDNDNHNDNDKDNDNDNHNDNDNDNDNDNDNDNDNDNDNHNDNDNHNDNDNDNDNDNHNDNDNDNDNDNDNDNDND # ORIGINAL: g10768.t1 original gene structure, not modified by PASA NODE_83_length_43100_cov_40.874 AUGUSTUS gene 8433 9340 . + . ID=g10768;Name=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS mRNA 8433 9340 . + . ID=g10768.t1;Parent=g10768;Name=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 8433 8564 . + . ID=g10768.t1.exon1;Parent=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 8433 8564 . + 0 ID=cds.g10768.t1;Parent=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 8861 8947 . + . ID=g10768.t1.exon2;Parent=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 8861 8947 . + 0 ID=cds.g10768.t1;Parent=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 9149 9340 . + . ID=g10768.t1.exon3;Parent=g10768.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 9149 9340 . + 0 ID=cds.g10768.t1;Parent=g10768.t1 #PROT g10768.t1 g10768 MTSEYPSRGLYILGANVIDAGRELSSFLGDLRGAYQLRRVAKTEGRRYEFGDYVVKVGTVTTSVEGIKYFVVEVQYGACSDISTGALMLRDIVKLIKADAQIPVVNYTAFGLGQTFGPGHVAAQYVSMFRERKLFV* # PASA_UPDATE: g10767.t1, single gene model update, valid-1, status:[pasa:asmbl_9619,status:12],[pasa:asmbl_9623,status:12], valid-1 NODE_83_length_43100_cov_40.874 . gene 3354 7434 . + . ID=g10767;Name=g10767.t1 NODE_83_length_43100_cov_40.874 . mRNA 3354 7434 . + . ID=g10767.t1;Parent=g10767;Name=g10767.t1 NODE_83_length_43100_cov_40.874 . five_prime_UTR 3354 3793 . + . ID=g10767.t1.utr5p1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 3354 4003 . + . ID=g10767.t1.exon1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 3794 4003 . + 0 ID=cds.g10767.t1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 4147 4251 . + . ID=g10767.t1.exon2;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 4147 4251 . + 0 ID=cds.g10767.t1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 4573 6037 . + . ID=g10767.t1.exon3;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 4573 6037 . + 0 ID=cds.g10767.t1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 6241 6331 . + . ID=g10767.t1.exon4;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 6241 6331 . + 2 ID=cds.g10767.t1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 6519 6573 . + . ID=g10767.t1.exon5;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 6519 6573 . + 1 ID=cds.g10767.t1;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . exon 6919 7434 . + . ID=g10767.t1.exon6;Parent=g10767.t1 NODE_83_length_43100_cov_40.874 . CDS 6919 7434 . + 0 ID=cds.g10767.t1;Parent=g10767.t1 #PROT g10767.t1 g10767 MDVSRRLPLLDPLDSVIDKHGRGDAHGRIPTVRVRIDLNGSEGIVSFSKELKRLGITRSQKTASKSPKKKEKVALREDVSDGELTGESSEGDGGLLGRDVIARIQARHVNNAEGSDSCGEGEGARKGTKSKEDGKGKKRRRKDQVLDDWYDLNDPFIDDEDAYDERLGSKGKPKEDGFFVFRGRVELDGANSDSRAAEDANGRSDVGSDDDFASSRPVARKDGGGAGGAGSPRGVKGKGSRKKATAGREGKGGDPLSVGGVVGRGGIVKKRGGQKTNKEHHKKSANEGEGGEKKKKRKKAAAVAAAVAAVAASSTAEALAGTVAASGNAGALQAVSGDSRKKPVEGDGTKKRKRRADADKDGGGEVKRRRSKKARADALGAAAESANGEAVDTVKKPVQWVFAEVVHGNKGGSVSDSRSELGATSEREREQQLSGASATTANGAGSGPVSAGGRSFDGKDLIWEDSQMDSQMDFAGVGIGGPRVDLHEKVEASLHGFDLIVNQDCRGRSMSHEAQSALLDTAKHCLPFLTTPEMEGEFYERLASIMSQRRKNVRNRVRILLQRDSAMEIGSQVTIAMTSLKSLVRELADDVATASPDKWPQEVIGVLGKVVSLQTERCRIEKSGDSNGAVTVADAVLEFVEKVVVPVFSKADITAAALLAAVDSTIVPSKKADQRPTTTKTVTSSGELTKPANAAKSGDLAPVHPQPPPRVNPMPSQDSRASAHLSSASSASVQRQSSESGVAAGPCAHKWEKSNGNRLCRRCGKSPQEVANDNATPPPRIVAGVGRDAADGVGASAASVRREGGADVYLSSA* # PASA_UPDATE: g10775.t1, single gene model update, valid-1, status:[pasa:asmbl_9627,status:12],[pasa:asmbl_9628,status:12], valid-1 NODE_83_length_43100_cov_40.874 . gene 34416 42972 . - . ID=g10775;Name=g10775.t1 NODE_83_length_43100_cov_40.874 . mRNA 34416 42972 . - . ID=g10775.t1;Parent=g10775;Name=g10775.t1 NODE_83_length_43100_cov_40.874 . five_prime_UTR 42812 42972 . - . ID=g10775.t1.utr5p1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 42696 42972 . - . ID=g10775.t1.exon1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 42696 42811 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 42084 42402 . - . ID=g10775.t1.exon2;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 42084 42402 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 41852 41910 . - . ID=g10775.t1.exon3;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 41852 41910 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 41541 41667 . - . ID=g10775.t1.exon4;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 41541 41667 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 40870 41270 . - . ID=g10775.t1.exon5;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 40870 41270 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 40483 40615 . - . ID=g10775.t1.exon6;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 40483 40615 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 40035 40233 . - . ID=g10775.t1.exon7;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 40035 40233 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 39416 39576 . - . ID=g10775.t1.exon8;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 39416 39576 . - 2 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 38994 39078 . - . ID=g10775.t1.exon9;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 38994 39078 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 38762 38808 . - . ID=g10775.t1.exon10;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 38762 38808 . - 2 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 37006 38483 . - . ID=g10775.t1.exon11;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 37006 38483 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 36671 36823 . - . ID=g10775.t1.exon12;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 36671 36823 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 35898 36344 . - . ID=g10775.t1.exon13;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 35898 36344 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 35532 35691 . - . ID=g10775.t1.exon14;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 35532 35691 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 35243 35355 . - . ID=g10775.t1.exon15;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 35243 35355 . - 0 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . exon 34416 34911 . - . ID=g10775.t1.exon16;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . CDS 34692 34911 . - 1 ID=cds.g10775.t1;Parent=g10775.t1 NODE_83_length_43100_cov_40.874 . three_prime_UTR 34416 34691 . - . ID=g10775.t1.utr3p1;Parent=g10775.t1 #PROT g10775.t1 g10775 MRGLKFIGLKSIVDEALRICQLECAVVDQCVVVERLGSNCSEIVSMGPRDSWYHELMSVASDVCAPEWVDAEDPLFMLYTSGSTGKPKGVLHTTGGYMVYAATTFKYVFDYHPGDVYWCTADIGWITGHSYIVYGPLANGATGIIAHTDANLYAAAEKQFLPSDKLTAAMKKVFQRQVLTCLSGRYGVVLAITGAVVLVVSALQFGEAWLEWSIEKYHANFNEFNDNVSGRSFKGRLCSPIPIDIVYTWVNGSDPRLLTQLSSLRRQLDLPDDVVSASRFQDNEELRFSLRSIERHAPWVRHIYIVTNGQIPHWLNLDHPRLSIITHEMLFDNKTHLPTFSSPAIEANIHKIPGLSEKFIYLNDDVMFGTDVWPDDFYTHGAGQKVYLAWGVPNCNEGCPSSWLGDRYCDAPCNTSSCDWDGGDCLNATIVANSRAGGAGGSGTTIGGRTGVIGSQYCSPGCPDTWIADRYCDKACQSEACGYDGGDCGPDALRTYVHGIVLDANTTEILLPPMLPAAYFNLTDIFGDAKITLGSHDNPTAVRTASISQRLKTLTITFHRHVRAANTTIELTAKLNETVLFHNFTVFSETFNATAAEIARDELREEELAAEAEEYIRNVTTVASSAPSNATAAPPPPHVPVSHVWPVDPIVQGPRDRTTMKIQEADTTNQWLNLNAQLAAQQRYQPPPPLDVPAARSADQVVGEMEAPFVAQNATLSVDVFYTLRNYSSEFVDGDLTLKGYTKRVNALAKVHGVAVLASVSSTEVATSVIVTATASPADSVRARDERNVDASDAPTASARVDSDEVTKAQSASPTAAPERPTASTPVEGVAVSESATYHPAPARNDTAVAQEERPVDVDKIIQRRNLLAWTAGDDDGSGSLRGNDGPIPTAEEYARDADGDGWKPLGVRAVEFFEQLATDAKNAGQSLSASVPEGKDSRFIHNAIGERRSPLPWERVGMFPKWASDRLREIERSDVDGASARESLRALGVSRGGRRLMDTFADSLKHVNKIYNKVYGTSPRKVPAHMPHMIDRTIIAQLQDKFPSEFQRTSANKLRSIDDMQYAFSYFYFLMSEKTTFNLSRVFETIDTDNDGKLSGNELRTLAATILDVPLKQMQVEWLWEAIANCTGTRPVADSPVQNGGRRLFGAPGGDLEAALSASRAEQLSSSASASADESAQNASSPHPGVAHPEVSGGGSVEHGIGVRWSGDFAVPITLDVIAGCKAIVDKLNVSKATAKESKFKFEIMDGQGKDIAFKMLQENVTRALHYLDAIRRDRNKFICLNDNINHTLPESYEVVAAIRHFYEALFPIQSSFELPPTQRNRFLHLDELQQWRGEQRVLQFYMNVAIVSVIFLVFCLCISGRVVRAKRAWAGRGRATPTPEGSRRDDTPPRDSPSTPSRKLLSV* # PASA_UPDATE: g10773.t1, single gene model update, valid-1, status:[pasa:asmbl_9626,status:3], valid-1 NODE_83_length_43100_cov_40.874 . gene 25252 30105 . - . ID=g10773;Name=g10773.t1 NODE_83_length_43100_cov_40.874 . mRNA 25252 30105 . - . ID=g10773.t1;Parent=g10773;Name=g10773.t1 NODE_83_length_43100_cov_40.874 . five_prime_UTR 29883 30105 . - . ID=g10773.t1.utr5p1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . exon 29717 30105 . - . ID=g10773.t1.exon1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . CDS 29717 29882 . - 0 ID=cds.g10773.t1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . exon 29337 29539 . - . ID=g10773.t1.exon2;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . CDS 29337 29539 . - 2 ID=cds.g10773.t1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . exon 26387 29130 . - . ID=g10773.t1.exon3;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . CDS 26387 29130 . - 0 ID=cds.g10773.t1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . exon 25252 26223 . - . ID=g10773.t1.exon4;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . CDS 25560 26223 . - 1 ID=cds.g10773.t1;Parent=g10773.t1 NODE_83_length_43100_cov_40.874 . three_prime_UTR 25252 25559 . - . ID=g10773.t1.utr3p1;Parent=g10773.t1 #PROT g10773.t1 g10773 MTALPRSAMHPVCAAASTRASARAGYSRRLLWGFAMHALLAASLYAVVSAHESHDGPSFGVEMEFAGMGKMRIPHINDIPQENYEAVIATFARGVFGADFPAIHHEVTPVPHPRFPNKYEPRRVRTSSWIDPKGRTWKVTSEYVTTTGIYDGYEVVFPPLVDPSEAEAVALALWSSGLVGRGAKSASHVHVNGTCLLGGDGASMSTPALGLANLLVMHEKIEPLIRRLFATRHFGGSRNPFSRTISEVHPGLVERVGEISADGDISFVTVGGLKNVFDDYLDAELAFVGLSSDAATGNSAASMERFSTMKRIWKYHSLNIANLIPVNPTYTGRKTTVEFRAFDLLSAEAVRLAVKFCRALVEKACADASQQIAVSIDGRLPQVPLGGESAVDLLPSNPADVRALAIELLKSLSLDPSEFESLLVGIKDETSEDWAEVLPNERSVARDARIDSRKKREAAAKAKADKVARAADAAVRTAQAIDARRPENENPAMPNEEMPVVADLWASLEGESVDYDEYAGEDAMDPDTEFPDENTHELLSDAVRRDIDDVRRDFGTAGAQYTNVRQRADWIGDVMSDGEEGKALVVDEVAEAEFNIEDNEDEESIDLFAYGTLGTCNPNPCQNGGTCVDEDKGFFCECTDDYYGEFCQYGMFTSTETRTATATNTATATMTVTATHTLIKSSTIKPHATSESSPAPTHTSSLKPSSHHTTPPARPTSTVHVSHLSSSSAAAVGSSYVPPPVKSKSASVSSSASHSPSASASASASKSASASSSASPSPSASGSSSVSASSAEESIAASSTVLTETVRSVRSAEPHISSTSIPSSAPTVLTTSFVLSSSATSTATAKASTTSSQPRSTSNPSAAARKAAIKIAFANVNQATFQAQYEAGFKNAIASAVSKALAKNALAFRKRRETVISTVGSDDVVILQYIQVGTTLEVVFYVAVMGADGEIVIPGDVLLAAVLAAQDAIAAALGLSITGIASSPLPDPDDGGGGGGGTSNSGSGGGGSSMGLAIGAAVGGVAVIGGVVGLLVYRRKRVSGSYGLQRVNIRNEEGGVVSDPAVLAMQGTIASPPEVVTMDNGTVVEIRRTESPNGDVGAGCTSGAVAASLSRRGSESYAMSAVGSVPTPIINDMRVSWRGSGPISASDDEHPAAQAGKAPGTAVASASKHVPTVAIAPADSDSSRPRRGSRGSSQRSEDSSGKSADISNVFIDAPEESSHTNLRVAASLGNVSETHSNLNVPLEGMQIAADSSGSTIDM* # ORIGINAL: g10766.t1 original gene structure, not modified by PASA NODE_83_length_43100_cov_40.874 AUGUSTUS gene 327 2639 . - . ID=g10766;Name=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS mRNA 327 2639 . - . ID=g10766.t1;Parent=g10766;Name=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 2458 2639 . - . ID=g10766.t1.exon1;Parent=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 2458 2639 . - 0 ID=cds.g10766.t1;Parent=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 2126 2248 . - . ID=g10766.t1.exon2;Parent=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 2126 2248 . - 1 ID=cds.g10766.t1;Parent=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 327 1760 . - . ID=g10766.t1.exon3;Parent=g10766.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 327 1760 . - 1 ID=cds.g10766.t1;Parent=g10766.t1 #PROT g10766.t1 g10766 MHAVDVALSRLAFFAGASGYGYRDQQSGTAHISMCIAKKQYYLHYLKQSTSTVTILQNVDVEEYRMGRFTTDGTLCVDSPKVTVNLRMGCVDGEVVGEPFVWNVTVGSAVGGQYLRDYAELLRSVSRRRLDSPIGAARIRIVLLASREKTIAWDENDYSEHSPVVHAHAGRTRRAPQASEGSDSASQHASVVTSPPVFKDGLAGRSSFYSKTDRSANAGTHFHDMLVREVEAIEGASHTLPQMGPILAAFFGPHIDRVYSLSVDVNAVVMVVTHQLMAMRAVGKRGGSAKGGQEEEYGVDVPSLTTPAPEERPPVCSGSYVSSAAFGRRVWMRAALRVRQATDTKLSEQIQYEGTDELSQEALGVFIDLAEGFNTSELFRRCPWQRNVNGKPSLDPSDFEMWAACRVGYVEALVAKALSHPFTSDEDEDLSFKAKRRRLVAAVALAAADVNATLRWHWPSEAARAAVAHRWWDCRSPRPCVGGVRTGGSGDAAVGAEDATHCAANTPSSASVWSPSSFSCVDAGDGVSQCTLNIEDGGIVDFVCALGSVAALHADGRYFAVEDAKEGKSIPFEDELLAA # PASA_UPDATE: g10774.t1, single gene model update, valid-1, status:[pasa:asmbl_9625,status:3], valid-1 NODE_83_length_43100_cov_40.874 . gene 31650 34132 . + . ID=g10774;Name=g10774.t1 NODE_83_length_43100_cov_40.874 . mRNA 31650 34132 . + . ID=g10774.t1;Parent=g10774;Name=g10774.t1 NODE_83_length_43100_cov_40.874 . five_prime_UTR 31650 31728 . + . ID=g10774.t1.utr5p1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 31650 31918 . + . ID=g10774.t1.exon1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 31729 31918 . + 0 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 32133 32260 . + . ID=g10774.t1.exon2;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 32133 32260 . + 2 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 32516 32680 . + . ID=g10774.t1.exon3;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 32516 32680 . + 0 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 32808 32947 . + . ID=g10774.t1.exon4;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 32808 32947 . + 0 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 33130 33264 . + . ID=g10774.t1.exon5;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 33130 33264 . + 1 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 33530 33573 . + . ID=g10774.t1.exon6;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 33530 33573 . + 1 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . exon 33883 34132 . + . ID=g10774.t1.exon7;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . CDS 33883 34112 . + 2 ID=cds.g10774.t1;Parent=g10774.t1 NODE_83_length_43100_cov_40.874 . three_prime_UTR 34113 34132 . + . ID=g10774.t1.utr3p1;Parent=g10774.t1 #PROT g10774.t1 g10774 MLSTCCWSWTTWVASAIGVLAVMAKAWSLMARRPFDAKGKHVFVTGGSTGLGLATAVRFARLGANVTVASRSEHNLNRAKELLEKSRVSASQKFLAIRCDVVDFAQTTHAVQQSEAANGRAIDFLICSAGLAFPGYFLHQDISLYRAQMDLNYFGCVNVAKAAAPGMVARGSGHICLVSSGIVCFPMIGYTQYCPTKYALRGFSDCLRSELRPHNVDVSIYFPANIDSPGYEQENLAKPVETRELEGASTPVSPESAAECLVRGIQNGSYAFTNDLLTRVGLIGCGTLAPRDNIITDALFAPLVILILGVVRVIFDSTVSKFAAQKKEGAVGAAAPAAPKKTE* # ORIGINAL: g10771.t1 original gene structure, not modified by PASA NODE_83_length_43100_cov_40.874 AUGUSTUS gene 18035 20161 . + . ID=g10771;Name=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS mRNA 18035 20161 . + . ID=g10771.t1;Parent=g10771;Name=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 18035 18130 . + . ID=g10771.t1.exon1;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 18035 18130 . + 0 ID=cds.g10771.t1;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 18262 18424 . + . ID=g10771.t1.exon2;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 18262 18424 . + 0 ID=cds.g10771.t1;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 18587 18783 . + . ID=g10771.t1.exon3;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 18587 18783 . + 2 ID=cds.g10771.t1;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 18896 19060 . + . ID=g10771.t1.exon4;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 18896 19060 . + 0 ID=cds.g10771.t1;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS exon 19217 20161 . + . ID=g10771.t1.exon5;Parent=g10771.t1 NODE_83_length_43100_cov_40.874 AUGUSTUS CDS 19217 20161 . + 0 ID=cds.g10771.t1;Parent=g10771.t1 #PROT g10771.t1 g10771 MAAMASIAMTAAVSLLVFIAFVIYKIVVSAFKPSAPTVRHIKSEPKVKSLNGAENMFLHLEDSERRQTIAGILVFDGPISREAVEKTMSNAVEKHRRLRQVIVGTRIPFISGFKDYHNFKLSDHIVEEFIGSEDEKVLQASIAGKIATPFNKTRPMWEATIFHGIGNSSALFLRMHHAIGDGMSANILLAASALDDAGVSYAEVIKKSFEQMMRGRRRSNSMNTSTAYFNLRSLGVSSRGMILVGALWALSRPISVLMRQYGVLRHFGVSVGQVLVDLFFLIIERKQILAKPSTSGKVASWTTGVSLDEIKAIKSAFGVTVNDVLVSAITGAMRRHIVRLGRRVPRDVFSPIPVMLRRSVAEIETLRNQVAAVWHFLPTGMEDPVARLKEVHERMLARKRNSLYMAFTLGNMSFWGASPRSIARPVFNNFYDKAVSIVTNVSGPQGLLRLEGVPIKDIHIFGLQSTCGGTAISIITYNGRVSVTLLADEDAGKAGCASEVFMMDDFQLEIAALKELAACRH* # PASA_UPDATE: g1817.t1, single gene model update, valid-1, status:[pasa:asmbl_10178,status:12], valid-1 NODE_971_length_15237_cov_37.7207 . gene 61 3401 . - . ID=g1817;Name=g1817.t1 NODE_971_length_15237_cov_37.7207 . mRNA 61 3401 . - . ID=g1817.t1;Parent=g1817;Name=g1817.t1 NODE_971_length_15237_cov_37.7207 . five_prime_UTR 3345 3401 . - . ID=g1817.t1.utr5p1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . five_prime_UTR 3207 3229 . - . ID=g1817.t1.utr5p2;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 3345 3401 . - . ID=g1817.t1.exon1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 3122 3229 . - . ID=g1817.t1.exon2;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 3122 3206 . - 0 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 2770 2908 . - . ID=g1817.t1.exon3;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 2770 2908 . - 2 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 2205 2472 . - . ID=g1817.t1.exon4;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 2205 2472 . - 1 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 1676 1738 . - . ID=g1817.t1.exon5;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 1676 1738 . - 0 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 1501 1542 . - . ID=g1817.t1.exon6;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 1501 1542 . - 0 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 1066 1164 . - . ID=g1817.t1.exon7;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 1066 1164 . - 0 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 623 751 . - . ID=g1817.t1.exon8;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 623 751 . - 0 ID=cds.g1817.t1;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . exon 61 282 . - . ID=g1817.t1.exon9;Parent=g1817.t1 NODE_971_length_15237_cov_37.7207 . CDS 61 282 . - 0 ID=cds.g1817.t1;Parent=g1817.t1;3_prime_partial=true #PROT g1817.t1 g1817 MMKPARGKSSMDVLRITTKNDPYTDTIAAMKVLQTDQLKAIAARTDAKVAMLDELQDFMKRKGEIELEYATKMERLVEKFNARRKGSQTIGRVAGSGHWIAEMTEGGVDSDTRGGPNTTTDAWTCVLDSHKRVAKMKSVLATTLSDLGDKLTMLSKETAINSKQCIDAGTMLMDEFKKTMVELEEAGKSYHGLETKSQQAKTKYEEAERKKSDTKGTLTKLMGKDFVKEADKMREALLQQERRALLARNEYILTVQGANAHRIRYFESDIISLIDVLDRKYHDTFSNILHDFVKAENDVIFGMQTATGDIKQKATNVDALFEKAQFIKENELCFVVPGELPYIAQAGDA # ORIGINAL: g1820.t1 original gene structure, not modified by PASA NODE_971_length_15237_cov_37.7207 AUGUSTUS gene 12495 14628 . - . ID=g1820;Name=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS mRNA 12495 14628 . - . ID=g1820.t1;Parent=g1820;Name=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 14516 14628 . - . ID=g1820.t1.exon1;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 14516 14628 . - 0 ID=cds.g1820.t1;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 13454 14234 . - . ID=g1820.t1.exon2;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 13454 14234 . - 1 ID=cds.g1820.t1;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 13212 13260 . - . ID=g1820.t1.exon3;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 13212 13260 . - 0 ID=cds.g1820.t1;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 12495 12877 . - . ID=g1820.t1.exon4;Parent=g1820.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 12495 12877 . - 2 ID=cds.g1820.t1;Parent=g1820.t1 #PROT g1820.t1 g1820 MRLGANAPITVETAIDRLGVRLGVQGDAATTESRANHMCVVRTADRTPDGRWIDRRTDMERVIPILNRYKATTARTAQSDPWSAATSTQPVPSSSKTTHVLPTTPSLRQKHTLASSHSRAFTTARTCMAAHAEHASAAMPQHPSSSQTADVTSDTPVTIADVHRVMRTLIASFQRHGASPPIGRDPALFRSALLRAVAREVDAALFPDAHSHSHSHSHSHSPPHHTRSTSNGASVGGGRSTLDVGGAGAAATGPMASAVGVKSAPRGVVRQDNVRESWVSAADKEGRGTGGNDRMAWKAIHDAVRGLKLPGNSRVRADSLHACAGRRNAGRSFFRGVVDIPSPRAVPELPNENPPGPELPNANPPGPELPQREKPGHIWPQEAPPERPIPPGHPGIPGPDSPAAPPERPYRDLPELPNWPIPEMPGHDLPEWSPSGPELPQ* # PASA_UPDATE: g1819.t1, single gene model update, valid-1, status:[pasa:asmbl_10179,status:3], valid-1 NODE_971_length_15237_cov_37.7207 . gene 5699 11641 . - . ID=g1819;Name=g1819.t1 NODE_971_length_15237_cov_37.7207 . mRNA 5699 11641 . - . ID=g1819.t1;Parent=g1819;Name=g1819.t1 NODE_971_length_15237_cov_37.7207 . five_prime_UTR 11490 11641 . - . ID=g1819.t1.utr5p1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . five_prime_UTR 11097 11200 . - . ID=g1819.t1.utr5p2;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 11490 11641 . - . ID=g1819.t1.exon1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 11090 11200 . - . ID=g1819.t1.exon2;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 11090 11096 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 10691 10882 . - . ID=g1819.t1.exon3;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 10691 10882 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 10171 10355 . - . ID=g1819.t1.exon4;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 10171 10355 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 9741 9875 . - . ID=g1819.t1.exon5;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 9741 9875 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 9323 9559 . - . ID=g1819.t1.exon6;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 9323 9559 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 8982 9081 . - . ID=g1819.t1.exon7;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 8982 9081 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 8752 8841 . - . ID=g1819.t1.exon8;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 8752 8841 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 8418 8513 . - . ID=g1819.t1.exon9;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 8418 8513 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 8010 8107 . - . ID=g1819.t1.exon10;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 8010 8107 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 7632 7752 . - . ID=g1819.t1.exon11;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 7632 7752 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 7304 7461 . - . ID=g1819.t1.exon12;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 7304 7461 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 7078 7192 . - . ID=g1819.t1.exon13;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 7078 7192 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 6441 6808 . - . ID=g1819.t1.exon14;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 6441 6808 . - 2 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . exon 5699 6186 . - . ID=g1819.t1.exon15;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . CDS 6049 6186 . - 0 ID=cds.g1819.t1;Parent=g1819.t1 NODE_971_length_15237_cov_37.7207 . three_prime_UTR 5699 6048 . - . ID=g1819.t1.utr3p1;Parent=g1819.t1 #PROT g1819.t1 g1819 MCGIFAYLNYLTLKDRQTIVETLINGLSRLEYRGYDSAGVAIDADDGSTRIIRTKGKVKNLETEAFAQKDIDFGREFDCHLGIAHTRWATHGVPSPENAHPHRSDPTAEFVVVHNGIITNYKELKLLLESKGYRFESETDTESVAKLIKYVYDSQKEKTMTFRELVEAVVLQVEGAFAFVFKSRHFPNEVVACRRGSPLLIGIKTLHKFNTDQIPILYASDLKNFDYRKVGSTLPRSNSFSSVLSAVGGRPNVEYFLASDASAIIEHTNRVIYLEDDDVAYIKDGELMIHRLHHDESSPNRVIRTLEMELQQIMKGNFDHFMQKEIFEQPESVVNTMRGRVKFDSYEVLLGGLKQELHSMRRARRLMFIACGTSYHSAVATRQLTEELTELPVAIELASDFLDRCTPIFRDDVCIFISQSGETADTLNALKYCKAKGALCVGVTNTVGSAISRETHCGVHINAGPEIGVASTKAYTSQILSLIMFALMMAEDSVSKTERRKEIIDGLKVLHERIQKVLLLDKQISELAELLCHEKSLLVMGRGYQYATCLEGALKIKELTYMHSEGILAGELKHGPLAMIDENMPVLMIVMRDSTLQKIQNALEQVTARKGRPIVICTEGDAPLVAKYAYRTIEVPHMPDCLQGLVTVIPLQLLSYHIATLKKYDVDCPRNLAKSVTVE* # ORIGINAL: g1818.t1 original gene structure, not modified by PASA NODE_971_length_15237_cov_37.7207 AUGUSTUS gene 4479 5316 . + . ID=g1818;Name=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS mRNA 4479 5316 . + . ID=g1818.t1;Parent=g1818;Name=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 4479 4553 . + . ID=g1818.t1.exon1;Parent=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 4479 4553 . + 0 ID=cds.g1818.t1;Parent=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 4908 5005 . + . ID=g1818.t1.exon2;Parent=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 4908 5005 . + 0 ID=cds.g1818.t1;Parent=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS exon 5160 5316 . + . ID=g1818.t1.exon3;Parent=g1818.t1 NODE_971_length_15237_cov_37.7207 AUGUSTUS CDS 5160 5316 . + 1 ID=cds.g1818.t1;Parent=g1818.t1 #PROT g1818.t1 g1818 MENLTEVFEAIADDIESKEMDVSYSTGVLTVKLGNDLGTYVINKQSPNKQIWLSSPTSGPKRYDYDHNKRDWIYTHDRQSIHTLLTTEVSKALGIPARFTAPADEVDER* # ORIGINAL: g11711.t1 original gene structure, not modified by PASA NODE_3838_length_2647_cov_38.672 AUGUSTUS gene 426 2471 . - . ID=g11711;Name=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS mRNA 426 2471 . - . ID=g11711.t1;Parent=g11711;Name=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 2281 2471 . - . ID=g11711.t1.exon1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 2281 2471 . - 2 ID=cds.g11711.t1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 1917 2036 . - . ID=g11711.t1.exon2;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 1917 2036 . - 0 ID=cds.g11711.t1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 1594 1777 . - . ID=g11711.t1.exon3;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 1594 1777 . - 0 ID=cds.g11711.t1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 1124 1191 . - . ID=g11711.t1.exon4;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 1124 1191 . - 2 ID=cds.g11711.t1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 707 850 . - . ID=g11711.t1.exon5;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 707 850 . - 0 ID=cds.g11711.t1;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS exon 426 507 . - . ID=g11711.t1.exon6;Parent=g11711.t1 NODE_3838_length_2647_cov_38.672 AUGUSTUS CDS 426 507 . - 0 ID=cds.g11711.t1;Parent=g11711.t1 #PROT g11711.t1 g11711 HTIPITLKTVPVKHADGSLMFHAEVHDMGTDGFSAAFTCDANGHVCSVSTSFLMFFGYKSPEEIVGRHYRTIFPDAHTNLSIDGRARTSALHVDGSRIDVNVEVNRFSAAGTVLWGYQVERHLDKAKFVDPRADRNLPTKGKDDKKRPLQMLEGLGQYVGTYRIGKVLGSGSFGAVLLATHRLTGKVVAIKAIARDAINSNINREIEVLKRVKHPNIVSLYEIIDTPERVLMVMEYMPGGELFDYVVHNGACDETEARNYFR # PASA_UPDATE: g10999.t1, single gene model update, valid-1, status:[pasa:asmbl_1831,status:12], valid-1 NODE_1513_length_10798_cov_43.5765 . gene 5102 6235 . + . ID=g10999;Name=g10999.t1 NODE_1513_length_10798_cov_43.5765 . mRNA 5102 6235 . + . ID=g10999.t1;Parent=g10999;Name=g10999.t1 NODE_1513_length_10798_cov_43.5765 . five_prime_UTR 5102 5149 . + . ID=g10999.t1.utr5p1;Parent=g10999.t1 NODE_1513_length_10798_cov_43.5765 . exon 5102 5375 . + . ID=g10999.t1.exon1;Parent=g10999.t1 NODE_1513_length_10798_cov_43.5765 . CDS 5150 5375 . + 0 ID=cds.g10999.t1;Parent=g10999.t1 NODE_1513_length_10798_cov_43.5765 . exon 5802 6235 . + . ID=g10999.t1.exon2;Parent=g10999.t1 NODE_1513_length_10798_cov_43.5765 . CDS 5802 5983 . + 2 ID=cds.g10999.t1;Parent=g10999.t1 NODE_1513_length_10798_cov_43.5765 . three_prime_UTR 5984 6235 . + . ID=g10999.t1.utr3p1;Parent=g10999.t1 #PROT g10999.t1 g10999 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKVHGSLARAGKVKGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVAAFGKKKGPNSNS* # PASA_UPDATE: g11002.t1, single gene model update, valid-1, status:[pasa:asmbl_1830,status:12], valid-1 NODE_1513_length_10798_cov_43.5765 . gene 9307 10738 . - . ID=g11002;Name=g11002.t1 NODE_1513_length_10798_cov_43.5765 . mRNA 9307 10738 . - . ID=g11002.t1;Parent=g11002;Name=g11002.t1 NODE_1513_length_10798_cov_43.5765 . five_prime_UTR 10735 10738 . - . ID=g11002.t1.utr5p1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . exon 10653 10738 . - . ID=g11002.t1.exon1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . CDS 10653 10734 . - 0 ID=cds.g11002.t1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . exon 10235 10276 . - . ID=g11002.t1.exon2;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . CDS 10235 10276 . - 2 ID=cds.g11002.t1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . exon 9961 10061 . - . ID=g11002.t1.exon3;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . CDS 9961 10061 . - 2 ID=cds.g11002.t1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . exon 9656 9731 . - . ID=g11002.t1.exon4;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . CDS 9656 9731 . - 0 ID=cds.g11002.t1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . exon 9307 9488 . - . ID=g11002.t1.exon5;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . CDS 9391 9488 . - 2 ID=cds.g11002.t1;Parent=g11002.t1 NODE_1513_length_10798_cov_43.5765 . three_prime_UTR 9307 9390 . - . ID=g11002.t1.utr3p1;Parent=g11002.t1 #PROT g11002.t1 g11002 MAHMLFNSVGLLQRFSLQTPLHDEHLLAPLSLPPSAEDTASPIATEYAALIAKTAREINSLIECLPAVDNRTDNHCESLEAIETANERMEAQFESAIAEGEARLEAIRATLRLVADNQSHVQRGIPAQQTSP* # PASA_UPDATE: g11000.t1, single gene model update, valid-1, status:[pasa:asmbl_1829,status:12], valid-1 NODE_1513_length_10798_cov_43.5765 . gene 5949 8396 . - . ID=g11000;Name=g11000.t1 NODE_1513_length_10798_cov_43.5765 . mRNA 5949 8396 . - . ID=g11000.t1;Parent=g11000;Name=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 7846 8396 . - . ID=g11000.t1.exon1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 7846 8396 . - 0 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 7554 7667 . - . ID=g11000.t1.exon2;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 7554 7667 . - 1 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 7181 7343 . - . ID=g11000.t1.exon3;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 7181 7343 . - 1 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 6849 6996 . - . ID=g11000.t1.exon4;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 6849 6996 . - 0 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 6598 6728 . - . ID=g11000.t1.exon5;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 6598 6728 . - 2 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . exon 5949 6491 . - . ID=g11000.t1.exon6;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . CDS 6330 6491 . - 0 ID=cds.g11000.t1;Parent=g11000.t1 NODE_1513_length_10798_cov_43.5765 . three_prime_UTR 5949 6329 . - . ID=g11000.t1.utr3p1;Parent=g11000.t1 #PROT g11000.t1 g11000 MFIDSAEIPKMANGGGGPRKRASMFDDVSFSFAPSAAAPPVVSTDSDSDNSGNPLDEIRNQVVMRGAGGRGRGRGRGRGAGRASAVLAAAAAEHVISDDEMFDELSARREETREARKRSLRAKRKGGKNSVSKTPAKRAKVESAAAVASDAAQEAPVGGGAADGDSSSSLSSSSSSSSDEEVEMLSTSESEGSREPSPEPQFSKVLLAETARADVKKSKAVQAADLAIRRAARASALVATDDDAEDGDSRNPDDQIELSVRPLIQGAKPLKMRALLKTPFSAVVGQVAARLGCTPEELRMEWKNRTLAHDETPLGVRMQQQDAQITISLAPLAKSPPRTASASASSAEGVLALKVRRNDGNAIVIKIRKTSKLELLMQHYRDKASLGDKTLRFSFDGCALNPEDTPDSAGIEDEDIIEVDVE* # ORIGINAL: g10998.t1 original gene structure, not modified by PASA NODE_1513_length_10798_cov_43.5765 AUGUSTUS gene 363 4503 . - . ID=g10998;Name=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS mRNA 363 4503 . - . ID=g10998.t1;Parent=g10998;Name=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 4166 4503 . - . ID=g10998.t1.exon1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 4166 4503 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 3968 4058 . - . ID=g10998.t1.exon2;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 3968 4058 . - 1 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 3759 3825 . - . ID=g10998.t1.exon3;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 3759 3825 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 3451 3601 . - . ID=g10998.t1.exon4;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 3451 3601 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 3142 3266 . - . ID=g10998.t1.exon5;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 3142 3266 . - 1 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 2926 2984 . - . ID=g10998.t1.exon6;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 2926 2984 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 2713 2757 . - . ID=g10998.t1.exon7;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 2713 2757 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 2377 2529 . - . ID=g10998.t1.exon8;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 2377 2529 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 2115 2231 . - . ID=g10998.t1.exon9;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 2115 2231 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 1684 1972 . - . ID=g10998.t1.exon10;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 1684 1972 . - 0 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 1502 1597 . - . ID=g10998.t1.exon11;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 1502 1597 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 1124 1187 . - . ID=g10998.t1.exon12;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 1124 1187 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 883 965 . - . ID=g10998.t1.exon13;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 883 965 . - 1 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 643 762 . - . ID=g10998.t1.exon14;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 643 762 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 363 496 . - . ID=g10998.t1.exon15;Parent=g10998.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 363 496 . - 2 ID=cds.g10998.t1;Parent=g10998.t1 #PROT g10998.t1 g10998 MALIGRVGGWRPTRLLLAHAHAHLVSPPAGLALRPRFMAAVATLPDRDRGAENMCNITQSVAHTLVRSHEVLSGSFLSAYQTRQPPFGFNGLGELVYRRTYARQKDDGSYERWHETVQRVVEGTFRMQKQWMEQRQLGWSHARAVREAEDMYDRIFHMKFLPPGRGLWAMGSALTEERRCYAALNNCAFVSTACMHESDVKKSKPFTFLMDAAMLGVGVGFDTKGAEPVLHGHRPIMVKGADRCLPVVSYEIPDSREGWTQSLEMLLDSYFDGTACVDFNYDKIRPAGRRIKAFGGVSSGPEPLAQLHKDLHQVLDAASGNPLSVTDIVDIMNLIGKCVVSGNVRRTAEIAFGSPSSNEYLDLKNFAKNPRRETFAWTSNNSVFCDIGMDYGPACERVQVNGEPGFAWLDNMRAYGRMGDPPNNRDYRAAGGNPCLEQTLESFELCCLVETFPANHDTKDDFQKTLRSALLYAKTVTLGETHWPETNRVLLRNRRIGCSMSGIAQFISARGLKNLREWCEDGYASLEYYDTEFSERFTIPRSIKLTSIKPSGTVSLLAGATPGMHYPISRYCIRRVRLSIRSDLLEPLKKAGYHLEPCVVSPDQTVIVSIPVDMGEGIRSIKEISMWEQLSLASFLQRHWADNQ # ORIGINAL: g11001.t1 original gene structure, not modified by PASA NODE_1513_length_10798_cov_43.5765 AUGUSTUS gene 8788 9165 . + . ID=g11001;Name=g11001.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS mRNA 8788 9165 . + . ID=g11001.t1;Parent=g11001;Name=g11001.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 8788 8858 . + . ID=g11001.t1.exon1;Parent=g11001.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 8788 8858 . + 0 ID=cds.g11001.t1;Parent=g11001.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS exon 8994 9165 . + . ID=g11001.t1.exon2;Parent=g11001.t1 NODE_1513_length_10798_cov_43.5765 AUGUSTUS CDS 8994 9165 . + 1 ID=cds.g11001.t1;Parent=g11001.t1 #PROT g11001.t1 g11001 MASQKMSLAMAEQEMEAITDLFNRVMTTCQKKCIPPVYKESDLSKAESVCVDRCVSKYLEVHERIGKKMADLQQAAMPAQ* # PASA_UPDATE: g1273.t1, single gene model update, valid-1, status:[pasa:asmbl_5693,status:12], valid-1 NODE_3193_length_4053_cov_37.5714 . gene 2672 3782 . + . ID=g1273;Name=g1273.t1 NODE_3193_length_4053_cov_37.5714 . mRNA 2672 3782 . + . ID=g1273.t1;Parent=g1273;Name=g1273.t1 NODE_3193_length_4053_cov_37.5714 . five_prime_UTR 2672 2737 . + . ID=g1273.t1.utr5p1;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . exon 2672 2793 . + . ID=g1273.t1.exon1;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . CDS 2738 2793 . + 0 ID=cds.g1273.t1;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . exon 2966 3105 . + . ID=g1273.t1.exon2;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . CDS 2966 3105 . + 1 ID=cds.g1273.t1;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . exon 3505 3559 . + . ID=g1273.t1.exon3;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . CDS 3505 3559 . + 2 ID=cds.g1273.t1;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . exon 3704 3782 . + . ID=g1273.t1.exon4;Parent=g1273.t1 NODE_3193_length_4053_cov_37.5714 . CDS 3704 3782 . + 1 ID=cds.g1273.t1;Parent=g1273.t1 #PROT g1273.t1 g1273 MHFTLDDDDDGGFVPDNQSSGKLAALFRTDAQHHQGGNEKLTYQRPTAPKGQPQAQAPQAGQAQKAPETMSLIHACVGVHIYKFINNQYASQGKFGLAIVGMHSAPQVR* # PASA_UPDATE: g1272.t1, single gene model update, valid-1, status:[pasa:asmbl_5694,status:12], valid-1 NODE_3193_length_4053_cov_37.5714 . gene 119 2293 . - . ID=g1272;Name=g1272.t1 NODE_3193_length_4053_cov_37.5714 . mRNA 119 2293 . - . ID=g1272.t1;Parent=g1272;Name=g1272.t1 NODE_3193_length_4053_cov_37.5714 . five_prime_UTR 2135 2293 . - . ID=g1272.t1.utr5p1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . exon 1983 2293 . - . ID=g1272.t1.exon1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . CDS 1983 2134 . - 0 ID=cds.g1272.t1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . exon 1431 1494 . - . ID=g1272.t1.exon2;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . CDS 1431 1494 . - 1 ID=cds.g1272.t1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . exon 1124 1272 . - . ID=g1272.t1.exon3;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . CDS 1124 1272 . - 0 ID=cds.g1272.t1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . exon 633 841 . - . ID=g1272.t1.exon4;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . CDS 633 841 . - 1 ID=cds.g1272.t1;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . exon 119 348 . - . ID=g1272.t1.exon5;Parent=g1272.t1 NODE_3193_length_4053_cov_37.5714 . CDS 119 348 . - 2 ID=cds.g1272.t1;Parent=g1272.t1 #PROT g1272.t1 g1272 MVNSRAQDERNSKELKTLSQSPGNRYCMDCGDAGPTYTNVTVFTFVCERCSKLLAELGHRVKSIDFATFTDDEMDCLREIGNRVGRSVWLGKWSPGIYLQPDKHDTAGTKEFMRLKYIEKKWHSPEAEPEISFSGSGFQQQTSRPRSFTDFVTGKARLDTDANSANSKGSKRRTWYDGITNMLGSGSTYVQVGGAEQGDNIDQGDSFDSLDGNGPRLEVPSSASSHYQHQSHQHHDQQQPARANAKFVASVPDHFKGPDGNYVGTRY* # ORIGINAL: g4944.t1 original gene structure, not modified by PASA NODE_3329_length_3721_cov_41.7784 AUGUSTUS gene 198 3517 . + . ID=g4944;Name=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS mRNA 198 3517 . + . ID=g4944.t1;Parent=g4944;Name=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 198 397 . + . ID=g4944.t1.exon1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 198 397 . + 0 ID=cds.g4944.t1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 640 892 . + . ID=g4944.t1.exon2;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 640 892 . + 1 ID=cds.g4944.t1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 2029 2195 . + . ID=g4944.t1.exon3;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 2029 2195 . + 0 ID=cds.g4944.t1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 2602 2719 . + . ID=g4944.t1.exon4;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 2602 2719 . + 1 ID=cds.g4944.t1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 2978 3106 . + . ID=g4944.t1.exon5;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 2978 3106 . + 0 ID=cds.g4944.t1;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS exon 3353 3517 . + . ID=g4944.t1.exon6;Parent=g4944.t1 NODE_3329_length_3721_cov_41.7784 AUGUSTUS CDS 3353 3517 . + 0 ID=cds.g4944.t1;Parent=g4944.t1 #PROT g4944.t1 g4944 MAQIRVVPLGAGQDVGRSCVVVTLGGKNVMFDCGMHMGYNDHRRFPDFSFIAGEGSISDVIDCVIVSHFHLDHCGALPYLTEMVGYNGPVYMTHPTKAICPILLEDYRKITVEKKGEMNFFTSQMVKDCMKKVIAVNLHQTIKVDASLEIKVHDCVSKGGKVLIPVFALGRAQELCILIETYWERMGLTVPVYFSAGLTKKANDYYRLFIGWTNEKIKRTFVTRNMFDFKHIKPFERHYADNPGPQVLFATPGMLHAGMSLEVFKKWAPDAKNMVILPGYCVAGTVGNKILAGQRQIEIDRRTVLDVRMSVQNLSFSAHADAKGILQMIRMCDPAHVMLVHGEK # ORIGINAL: g11770.t1 original gene structure, not modified by PASA NODE_2673_length_5488_cov_41.8191 AUGUSTUS gene 3759 5410 . + . ID=g11770;Name=g11770.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS mRNA 3759 5410 . + . ID=g11770.t1;Parent=g11770;Name=g11770.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS exon 3759 4235 . + . ID=g11770.t1.exon1;Parent=g11770.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS CDS 3759 4235 . + 0 ID=cds.g11770.t1;Parent=g11770.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS exon 4595 5410 . + . ID=g11770.t1.exon2;Parent=g11770.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS CDS 4595 5410 . + 0 ID=cds.g11770.t1;Parent=g11770.t1 #PROT g11770.t1 g11770 MWCLVLSSVADCPCLNGGTCIIEKALNTTLGVNGTRSAVTCNCSDVVGYTGRRCEVSCAVTQRFGRNCSQACTCQNGASCDNVDGTCMCGFGWIGTFCSEPVTPSVPQVTSRVLSNKGTVSVLLRWTHMEDAQPDIAHAWLPWRYEIERTGCPETNTTILYDGNSYTDTAVATFQKYLYSVRVTNAMQKSSASFDIVVKVLKQEVPAPPTDPVVTPTLTPNGLYPMIKITWKDDSSSGPINNTLVYRDGVLLASQMVGTTYFDSAVEFGRTYTYGLVSVNEFGPSGMTTVNGTASVAPGTSNPTSTATTAKSSAVSSGAIAGGVISAVVGSACIVGALFYFKRRASIKKKEDQARSELELIDTVVRRPEIAEIELPGSWVRLRNMIGEGEFGEVYRADVTLAEGQNVVAAVKTFKVSALWSVDEIRSARR* # ORIGINAL: g11769.t1 original gene structure, not modified by PASA NODE_2673_length_5488_cov_41.8191 AUGUSTUS gene 197 2439 . + . ID=g11769;Name=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS mRNA 197 2439 . + . ID=g11769.t1;Parent=g11769;Name=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS exon 197 391 . + . ID=g11769.t1.exon1;Parent=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS CDS 197 391 . + 2 ID=cds.g11769.t1;Parent=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS exon 639 1744 . + . ID=g11769.t1.exon2;Parent=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS CDS 639 1744 . + 2 ID=cds.g11769.t1;Parent=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS exon 2383 2439 . + . ID=g11769.t1.exon3;Parent=g11769.t1 NODE_2673_length_5488_cov_41.8191 AUGUSTUS CDS 2383 2439 . + 0 ID=cds.g11769.t1;Parent=g11769.t1 #PROT g11769.t1 g11769 DDTASCVNERDYNANKTLCANGFLGYYVVGDDGKTYTSSKEYARTNRTSSWEMRDSEIKMVLRPGERVVVNVTVKPNLCKNLDVYFLLDATMRSGIGISSLAQYATSIPAAVASVCNPVSGVCDGNDLCASVGLGTFSDKPISPIGYWRAITSESEKVMYGDVPGVSYYKDQSASPAFNSVFRNTLAVSAVGNGSAFASALANVRTPIDTIDAPEAALEALLQAASCTGTVEWRSSSRRIVVTLTDADPHLAGDGAKAGLFRRNSGSCYVPSSVTDPVAFQSAIDVASIAQDYPSLGQVADALVSNNVLPVFAYFRTPLPATVDNFEQINDIVYPSIRDTIGLGATVQLERPIGSDIVAKIKAAIVESFKRATLSVLPISDGILRFIPGAPQTLSVNSTTTLSFAVFLDDAAVQPGTRVYTVFPVGLEGVLLKLQRKLIKLSQQLQRPRDL* # ORIGINAL: g2741.t1 original gene structure, not modified by PASA NODE_4938_length_1127_cov_42.0361_potentialcontaminant AUGUSTUS gene 217 957 . - . ID=g2741;Name=g2741.t1 NODE_4938_length_1127_cov_42.0361_potentialcontaminant AUGUSTUS mRNA 217 957 . - . ID=g2741.t1;Parent=g2741;Name=g2741.t1 NODE_4938_length_1127_cov_42.0361_potentialcontaminant AUGUSTUS exon 217 957 . - . ID=g2741.t1.exon1;Parent=g2741.t1 NODE_4938_length_1127_cov_42.0361_potentialcontaminant AUGUSTUS CDS 217 957 . - 0 ID=cds.g2741.t1;Parent=g2741.t1 #PROT g2741.t1 g2741 MASPRGSSGSAKFNRPLPNSHGLILYAEIDGTIQYLLVRRNASYPLSQLLFGEYNIENERYVLDLIKCVHRSERLDLITRKTDALIASIAAIRPMTPLETIRVKVKLRLLKEKYFSLTSSAADRKAAAPVYADIDVWGFVKGWKKTDCESEEEAARRECHEETGIRPEDVVLDPSFPPAFEEFIGSDKLPYRYTYRLARVTNPENYRTFVACSELSDVQWFTKDVALSKISTQREQRKAILEAVDAH # PASA_UPDATE: g14244.t1, single gene model update, valid-1, status:[pasa:asmbl_1574,status:12],[pasa:asmbl_1575,status:12],[pasa:asmbl_1576,status:12], valid-1 NODE_1433_length_11340_cov_41.2843 . gene 8226 11147 . - . ID=g14244;Name=g14244.t1 NODE_1433_length_11340_cov_41.2843 . mRNA 8226 11147 . - . ID=g14244.t1;Parent=g14244;Name=g14244.t1 NODE_1433_length_11340_cov_41.2843 . exon 9195 11147 . - . ID=g14244.t1.exon1;Parent=g14244.t1 NODE_1433_length_11340_cov_41.2843 . CDS 9195 11147 . - 0 ID=cds.g14244.t1;Parent=g14244.t1 NODE_1433_length_11340_cov_41.2843 . exon 8226 9026 . - . ID=g14244.t1.exon2;Parent=g14244.t1 NODE_1433_length_11340_cov_41.2843 . CDS 8637 9026 . - 0 ID=cds.g14244.t1;Parent=g14244.t1 NODE_1433_length_11340_cov_41.2843 . three_prime_UTR 8226 8636 . - . ID=g14244.t1.utr3p1;Parent=g14244.t1 #PROT g14244.t1 g14244 MREYVVRKGDVGSEMYFIHRGMVQVISEDNPPKVYAEMGAGAFFGEVGMLFSVPRTATIRAKTNCDLFLLTREDLDAILQFYPAISEHISAVAAARYDVAKKRSESTATAPVGLKPPTDNKAETVSPPPATSTSKQHVATSQQAAQEDTESDKMDDASIADVDTVVVSLSLSNDCAGVGGAGGSVSSDTQASDTCDDTTDSGTPHRKESQFSVQSEVVIVVDPATDNEEDGDAQVTPATQPAPLPQDTEGSQRESAHAPAQPSCASVPQTQTQPAQPTPPQPTPAPATSTAPPTDAADAQKVDVPGGCTHRARDHARRLWDALPVFLPETRARSVLEATEFWASLAAAFVVTYQAAFDSGSAALWIVAYVLEFLSIASAVCKTRAAYIDDEEKTVTSSSEMASNYLRQGTLLFDIACAVPIDLACLARSGGSRMQLLAWIRLTKLVRLRHVNRYVVTRWQKLNSRRNAIIILRFLLLVALSMHFIACAWYVLACAGGEACSAQSWTDTAVLQRLVGRSHSSRYCVSLYWAVSTLTSTAYGDVVAVDWYEMVFAVAVMVFGKLMFGYIFGSVASALVNANAQRVEYEERMSTLRGFMRKHGFARVLHNRVVRYNEYIWRRNRGMESDKLLHDLPLALRAEVSLSINQRAIEKVPLFQNTDAGFQRLISLLIKPAFFLPDEYIVRKGDIGDEMFFIRRGCVEVVSEETPPAVWDTMLPGQFFGEVSLFMCVPRTASIRAKEHVDMFVLRKQDLKSALARYPEVEAQLERIAAERFHMRRAAK* # ORIGINAL: g14243.t1 original gene structure, not modified by PASA NODE_1433_length_11340_cov_41.2843 AUGUSTUS gene 6308 8017 . - . ID=g14243;Name=g14243.t1 NODE_1433_length_11340_cov_41.2843 AUGUSTUS mRNA 6308 8017 . - . ID=g14243.t1;Parent=g14243;Name=g14243.t1 NODE_1433_length_11340_cov_41.2843 AUGUSTUS exon 7921 8017 . - . ID=g14243.t1.exon1;Parent=g14243.t1 NODE_1433_length_11340_cov_41.2843 AUGUSTUS CDS 7921 8017 . - 0 ID=cds.g14243.t1;Parent=g14243.t1 NODE_1433_length_11340_cov_41.2843 AUGUSTUS exon 6308 7818 . - . ID=g14243.t1.exon2;Parent=g14243.t1 NODE_1433_length_11340_cov_41.2843 AUGUSTUS CDS 6308 7818 . - 2 ID=cds.g14243.t1;Parent=g14243.t1 #PROT g14243.t1 g14243 MESASARMCSAVTLAGLRTLPAGTTSRVFWGGADTITTHPARLLHGRACRNASASSLVHVRTLSTHGSKSSACALLRLGDGTVVELPRSFNVRATLGDGAFLVREGEGGDSGDSGSLGSIVPLLDNGMPRDALVPGSVYTVRQLSSSHMVSSSAPPTFASSPAATATAVSTSAMQSEEELMVDRLVDDGGRDGALLKEVDALVVRRLSRQAAQLKRHIDSLRFALILNTAPAKSTVSHNTDTIATATTTTTTETKHSHASTPRQTSPPTPMTPPFEPASPFLTPIGHIESVHPGFRGAAPRQGSVCPSSYGRLRVNWGLHPAQSLQGLSEYSHAWIIFLFSHNRGAPSTPVAHPPRLGGAPVGLFASRAPVRPSPIGLTLATIERVEKDVVHLGGVDLIDGTPVLDIKPYIPAYDAPRGDVRVASWVSGLSDDSLSVEYAPGFTKAVKALVPSMRLFRTFDRALTAITELIACDPRKIGHRPNKKHPGSEMYVFVVDGIEVTCMFPPGEKRAIALAAVPLDTTSPPVGNDDNVRV* # PASA_UPDATE: g14242.t1, single gene model update, valid-1, status:[pasa:asmbl_1572,status:3], valid-1 NODE_1433_length_11340_cov_41.2843 . gene 1943 5856 . + . ID=g14242;Name=g14242.t1 NODE_1433_length_11340_cov_41.2843 . mRNA 1943 5856 . + . ID=g14242.t1;Parent=g14242;Name=g14242.t1 NODE_1433_length_11340_cov_41.2843 . five_prime_UTR 1943 2188 . + . ID=g14242.t1.utr5p1;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . exon 1943 2758 . + . ID=g14242.t1.exon1;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . CDS 2189 2758 . + 0 ID=cds.g14242.t1;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . exon 3028 3594 . + . ID=g14242.t1.exon2;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . CDS 3028 3594 . + 0 ID=cds.g14242.t1;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . exon 3925 5856 . + . ID=g14242.t1.exon3;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . CDS 3925 5706 . + 0 ID=cds.g14242.t1;Parent=g14242.t1 NODE_1433_length_11340_cov_41.2843 . three_prime_UTR 5707 5856 . + . ID=g14242.t1.utr3p1;Parent=g14242.t1 #PROT g14242.t1 g14242 MAPMRLHTLSASAALSLTVVAAAVSVASADVGVGINVTATGYVTAFTTHKRPSAVGASVGTIGGLIFGFLCVFGFAYARRWYYAPRRPKPKKSRVAPAKGDVEAPAHSKAAKGVPWSEDSPLGSSGVVVVDVEEESTSAIVPHLEDLKEGESIVRALFLDDPFIAEAIFQRDDYRELVAVEEELQREKEQAYVERMKHTLQMLKQKGKLGQDEVGSFLADFEKNIRDIDAKWSGECERRVLAIRNGSLEREAVLEREIQIRSEVMRERNIALKKTHDAALEAAASAAELTSDETDDLLHTHAKDAATLDRLMHEESVRQQALLNDKMFARVAFARMHRAVAEQESEKDRLWRGELQNALDTLLADGKIDSHTAASLLSRADSSYRAETEVVQEKLHVTQEELSKELTSRQSSEVDTILEEHRRLRSEDANRPRKVDPSTYVRLRHALIRQQRMDLRELERRLDQAASDRASEVMDAHYAALAAVRERLGKQILSSACEGDAAAVESVLTGHQDAMQRVQNAFAGERDRQQKALQERLAARAAGRESQRQSDGDAEEDVGQQQTDLVEKLLESQSGLSDKDRERILFEHQRQMMDLSNALGASRLKQRKVLEQKLAEKRAAKLAAIASRQKNETVIAAQGGGNAGSLLEKHSEERAVVLKELEEERAVALAQLRDVMEAETEAALRRQENELSALLAKYQVEKARRLQLIEEQRKAMSTLQSRLMETLTRDGSAVDTEDDVLQKHKEGLERLETAITQQRAQQWQALQEKLKEKQRVKEAQLRSEMERAASSERKRHELMGTVRTAAFRFQMLLLQKRHREQVAAAKEDHDLRLKREMSEMQSAMERTKEEALMHQQKLLLSALAVVAKMSEKELDALAVDVFKTKAAPQRELRKSLKKGHRRMTQKKEQIAATLERSMTVVSNMAARVVATGEDSLGSRTSSAASDDQENAEKTAAMTALVESDLASAEKRD* # ORIGINAL: g14081.t1 original gene structure, not modified by PASA NODE_3629_length_3082_cov_66.0592 AUGUSTUS gene 1428 2330 . + . ID=g14081;Name=g14081.t1 NODE_3629_length_3082_cov_66.0592 AUGUSTUS mRNA 1428 2330 . + . ID=g14081.t1;Parent=g14081;Name=g14081.t1 NODE_3629_length_3082_cov_66.0592 AUGUSTUS exon 1428 2330 . + . ID=g14081.t1.exon1;Parent=g14081.t1 NODE_3629_length_3082_cov_66.0592 AUGUSTUS CDS 1428 2330 . + 0 ID=cds.g14081.t1;Parent=g14081.t1 #PROT g14081.t1 g14081 MLRDLADIEQNPFKRSAYEKAFESVSAAKIQIGSGSDAIALPGIGKKIAEKIDIMLANGSLPQLDDAKVVRELTGVFGIGPVMARRLVAMGITRATLAEASLRDPKLLTEQQKLGLRYADDIAQRIPREEITRFETECQVSQLGFKVTFCGSYRREVSESGDVDILITPMTKSAESMTLANVVQKMHNVTAILAMGKTKAMLIAKLQQDRPYRRIDVRLLKPSEYWFGVLYFTGSDIFNKIMRQKAKELGFRLNEYSLHTPDGPCIANSEEDIFKALNMPFTPPAARATARSAAHHGDIS* # ORIGINAL: g2608.t1 original gene structure, not modified by PASA NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS gene 3123 8426 . - . ID=g2608;Name=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS mRNA 3123 8426 . - . ID=g2608.t1;Parent=g2608;Name=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 8354 8426 . - . ID=g2608.t1.exon1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 8354 8426 . - 0 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 7256 7570 . - . ID=g2608.t1.exon2;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 7256 7570 . - 2 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 6569 6895 . - . ID=g2608.t1.exon3;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 6569 6895 . - 2 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 5910 6215 . - . ID=g2608.t1.exon4;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 5910 6215 . - 2 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 4741 5569 . - . ID=g2608.t1.exon5;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 4741 5569 . - 2 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 3867 4462 . - . ID=g2608.t1.exon6;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 3867 4462 . - 1 ID=cds.g2608.t1;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS exon 3123 3454 . - . ID=g2608.t1.exon7;Parent=g2608.t1 NODE_1659_length_9934_cov_43.6809_potentialcontaminant AUGUSTUS CDS 3123 3454 . - 2 ID=cds.g2608.t1;Parent=g2608.t1 #PROT g2608.t1 g2608 MSYFQGLCQALLFVLAFASVISAEDGCLVLHPNILDPSVTAVNKLIGTVYEGATAIPATISTYLVSPVEAKNSFVADTAGGITYNASVPGFDVTDPDGDTYTLGASASRSVRITLTSPKCTATVTLFIIGTDYRIFPFDLGFIATRASQALTFNLVVQQYGAAAGSYVSMPTSTFGYNYYFRFNGQKYTPNDAIKTPVALMGPAAYTFPGYVTYEIYFYRDGFFDTLLCVFPLRVWMTALRSNNINKVTPIALFPSDLLTQAPAIGPKTPTDYTTGVTCTILNSFPTDSTKFKTDATGSITRVSASDLPITPISQPYMNELQCKKGPALQGSLLQLTYVFDLEFDDVQSSNLTVRANTYTMPESAPTATAPITYAPGTLLPIGFRLKDGTFSYVPLSSYKIDIVAATSPCEKDLTFCGVRYFAAVKGSAAWQVSTIQTDLDFEPVGSPPGWDGNYKLPVAARSPTGTHESIAFTLQRLSTYNIKLTDVDEPPKALVFNQTAAIVETVAGEDPIRTLGVLTAEDPDAVDTGKQTFTLTSHTYPTFGALSLSVVNGAVLLLASAPLDYERTSDGSITLTVNIAARSRTTLQTSFNIINANEKPTSITRTVVVATINENVAALKVAQLTMVDPDGACAENFCTTAPVFQITGGGDVFTVDSTGALSTSGPLDYETTPTVSVTLMVTDGGGLTSDPVTFTYAVNDVNEPPKNIRIVSKTGQPASFPENSGEKFLIGQIVADDPDAKDQNTLFYTVAIGTPAKFEYLSSNRSLRTLAGVAYDFEGTDLKTYGLERGYTVLVTVLDAGGFSAQKDLFIPMTNVDEPSTGVSFQLSTAAAIYDNAPAGYSLGFVFCIDPDCNCAPNTFCPECGVSPQMDASDANDRRIAIRGDNEVYVVSKLLAGATTVRVKCVDTLNAPAFDVSFNVKGTC* # PASA_UPDATE: g7017.t1, single gene model update, valid-1, status:[pasa:asmbl_2982,status:3], valid-1 NODE_1908_length_8620_cov_85.3327 . gene 3976 7672 . - . ID=g7017;Name=g7017.t1 NODE_1908_length_8620_cov_85.3327 . mRNA 3976 7672 . - . ID=g7017.t1;Parent=g7017;Name=g7017.t1 NODE_1908_length_8620_cov_85.3327 . five_prime_UTR 7604 7672 . - . ID=g7017.t1.utr5p1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 7516 7672 . - . ID=g7017.t1.exon1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 7516 7603 . - 0 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 7244 7369 . - . ID=g7017.t1.exon2;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 7244 7369 . - 2 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 6947 7052 . - . ID=g7017.t1.exon3;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 6947 7052 . - 2 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 6700 6769 . - . ID=g7017.t1.exon4;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 6700 6769 . - 1 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 6091 6183 . - . ID=g7017.t1.exon5;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 6091 6183 . - 0 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 5372 5593 . - . ID=g7017.t1.exon6;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 5372 5593 . - 0 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 5030 5160 . - . ID=g7017.t1.exon7;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 5030 5160 . - 0 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 4678 4772 . - . ID=g7017.t1.exon8;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 4678 4772 . - 1 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . exon 3976 4397 . - . ID=g7017.t1.exon9;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . CDS 4156 4397 . - 2 ID=cds.g7017.t1;Parent=g7017.t1 NODE_1908_length_8620_cov_85.3327 . three_prime_UTR 3976 4155 . - . ID=g7017.t1.utr3p1;Parent=g7017.t1 #PROT g7017.t1 g7017 MADTEEKREASVKDADTVTKYRTAGDISNRVLTQVIAAVKDGASALALAQLGDKLVQEETSKIYNKGKIAKGSAFPTCISVNNCVCHFSPLVEDPDVAIKTGDVVKIDLGVHIDGLAAVVAHTVVVGATAEAPASGRRADVILAAYNASEAALRLIKPGTKGSEISETVHKVADAFKCKPIEGMLSHSLKQDVIDGEKTVIQNPNEAHRKDHKDFTFETNDVFGMDVLISTGEGKTRVLETRTTVYKRTGTAYQLKMKASRAFYSEASAKCKTMPFSLRNFEDEKQARLGVTECLKHNVVEAFNVLYEKDDELVAQFKFTALITANGTIRINGLPVDAALYKTEHAIQDEALKTLLASSANRKAKKPAVKKDDAPAADAAAPAAAATPSA* # PASA_UPDATE: g7016.t1, single gene model update, valid-1, status:[pasa:asmbl_2981,status:3], valid-1 NODE_1908_length_8620_cov_85.3327 . gene 311 3479 . - . ID=g7016;Name=g7016.t1 NODE_1908_length_8620_cov_85.3327 . mRNA 311 3479 . - . ID=g7016.t1;Parent=g7016;Name=g7016.t1 NODE_1908_length_8620_cov_85.3327 . five_prime_UTR 3332 3479 . - . ID=g7016.t1.utr5p1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 3149 3479 . - . ID=g7016.t1.exon1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 3149 3331 . - 0 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 2825 2911 . - . ID=g7016.t1.exon2;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 2825 2911 . - 0 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 2112 2173 . - . ID=g7016.t1.exon3;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 2112 2173 . - 0 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 1758 1838 . - . ID=g7016.t1.exon4;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 1758 1838 . - 1 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 1075 1236 . - . ID=g7016.t1.exon5;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 1075 1236 . - 1 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 843 925 . - . ID=g7016.t1.exon6;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 843 925 . - 1 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . exon 311 652 . - . ID=g7016.t1.exon7;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . CDS 321 652 . - 2 ID=cds.g7016.t1;Parent=g7016.t1 NODE_1908_length_8620_cov_85.3327 . three_prime_UTR 311 320 . - . ID=g7016.t1.utr3p1;Parent=g7016.t1 #PROT g7016.t1 g7016 MDGPAYVVQCWAAGCLDALAWPSSFAVIYGSKRIRTNAVKCVVLNGLIFLGSLYFFNNAIKPLLLFILSITGSRPAASTDTASVVVDYILGGTYYVLWVYPIYCLSFLLNSIWYQEIADAAYLLQIGRPVAAGNKNESVLRSISARVADEIFRMGLQLVLVLQMGLIKAIPGIGPPVAFVFMSWLYALYCFEYKWINKGWSLERRLDYFERHWAYLCGFGVPFACGTFFFPHLVDAGAFALLFPSYIIMANSASPRPDSTEDAAGRRTSPERLPIFKQAKWLNTLLLRVIPRLKRSAAAASGPGDTRVEGLVRIAQTSTGSEMARAAHK* # ORIGINAL: g2226.t1 original gene structure, not modified by PASA NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS gene 686 3708 . + . ID=g2226;Name=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS mRNA 686 3708 . + . ID=g2226.t1;Parent=g2226;Name=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 686 1858 . + . ID=g2226.t1.exon1;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 686 1858 . + 0 ID=cds.g2226.t1;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 2186 2803 . + . ID=g2226.t1.exon2;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 2186 2803 . + 0 ID=cds.g2226.t1;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 3122 3178 . + . ID=g2226.t1.exon3;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 3122 3178 . + 0 ID=cds.g2226.t1;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 3538 3708 . + . ID=g2226.t1.exon4;Parent=g2226.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 3538 3708 . + 0 ID=cds.g2226.t1;Parent=g2226.t1 #PROT g2226.t1 g2226 MMAADADRSTLAVRGSDVENDDYTPSANAPNAAKPTAIAKGTIIYADGSKYEGSVVEGKRQGQGVMSYPDGSRYDGGWVADARHGHGTFASADDGAEYKGYWRDGKRSGNGMQGYGDGSRYDGSWLRENRDGWGVFSYGDGSKYEGYWKEDARHGRGKFSWSDGGAYSGEWAAGKMHGHGTRKYSDGSSYAGEFSAGLKHGRGIMRWKDGSWYEGDWRADRRHGRGKMCWAEEGKGADASSKAAVGTYDGEWADGLMEGVGKRVYADGRAYAGSFLRGQKHGKGEMRFPGGARYAGDWVDDRMEGEGVHHWPNGHCYSGGTNAVPCVGVYSLACFHDGAVRELRFRVERHVHRTFQSSGRPGVAYPQFARAVKAQLALSSFVVTYEHEGQKLMIADQAALDSFLDSRLSNSWLFVKRASQRVKCVYVPDARTLAMIASSSAILPSPYGGGAPLGHLAPSHAQVLATPSSGFAALSAPVQFLSPPFGPFLLSAATASVATTSSSNTGAGDANYSASRADGGGMHGTISKGSVLNNSAPSAAVNNAAAATAAHAASPFVVGKVDVAFPVTLDGLVAALRTASSREETPIVKYVDKDNDMVDINDQADVDEWGLLDFPKIYVSFPPPRPVAPEPLAPPTSEQRLCVLRIPPDELARRQESERSKVPPLRPFFVRG* # ORIGINAL: g2227.t1 original gene structure, not modified by PASA NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS gene 4504 6860 . + . ID=g2227;Name=g2227.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS mRNA 4504 6860 . + . ID=g2227.t1;Parent=g2227;Name=g2227.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 4504 6135 . + . ID=g2227.t1.exon1;Parent=g2227.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 4504 6135 . + 0 ID=cds.g2227.t1;Parent=g2227.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS exon 6504 6860 . + . ID=g2227.t1.exon2;Parent=g2227.t1 NODE_2029_length_8019_cov_39.191_potentialcontaminant AUGUSTUS CDS 6504 6860 . + 0 ID=cds.g2227.t1;Parent=g2227.t1 #PROT g2227.t1 g2227 MDLLPVELLCEIFRRALPTVRDRARVATVSRRWREAIFVGVDSIDVSHSWVIDSSHLTALMRRCAAVKSLLLPVSCALPLADIVEVCATCLVNPSVVTLLELRFHHVSEATAGDDDAGYWERLGCALPSLKTFAVVGEIIRPSPSLLSRVLLISSQLTLHSLNLDAVPLHWFNLESRTSLESVIIRSGPHLESLGLCVVDDPLPMHNDGIGSPSALSPLTVTCAAQCLRSVRLRFVTHTHNKPPSDLLPQSRRTAETGDTPMSRGTVIRRRVAGLVVQSFAECNGITHLDIAASKSAANHLACVFAALESSPKPLLTSLSLDGVPLSCSGVAQFLAAYPLITSICLGGSSNKDRSLSIISRHCKALRTVRAVAMKPPREKTMILPSQVASRAHVKHATSASTTTTTTTTTTTTTTATRCGDSAMAALFNDLGSLSISPLSAAHACKLAAPQLCADPVSGSKTVARVRSFLKEASLLTTLELVAADTDAGAADGGGGRRHHGGNTRASIAHVFAAWLPPFSVAMSFAGIVHLERLVLDANRAEVSQEEGDCLVARIARGCPSLVSLDLAGIALTQAGALHLVGGCASLRSLAIRDIICLEQIDAATASVLGRGLLGRVRHLTLSVASGRHVAAEMAEGEAIRRLPVWDALRATGAFVEISHEC* # PASA_UPDATE: g13166.t1, single gene model update, valid-1, status:[pasa:asmbl_1305,status:12], valid-1 NODE_1354_length_11810_cov_43.7619 . gene 5686 7055 . - . ID=g13166;Name=g13166.t1 NODE_1354_length_11810_cov_43.7619 . mRNA 5686 7055 . - . ID=g13166.t1;Parent=g13166;Name=g13166.t1 NODE_1354_length_11810_cov_43.7619 . five_prime_UTR 7005 7055 . - . ID=g13166.t1.utr5p1;Parent=g13166.t1 NODE_1354_length_11810_cov_43.7619 . exon 5686 7055 . - . ID=g13166.t1.exon1;Parent=g13166.t1 NODE_1354_length_11810_cov_43.7619 . CDS 5841 7004 . - 0 ID=cds.g13166.t1;Parent=g13166.t1 NODE_1354_length_11810_cov_43.7619 . three_prime_UTR 5686 5840 . - . ID=g13166.t1.utr3p1;Parent=g13166.t1 #PROT g13166.t1 g13166 MVASEGFHIKNLLSLGDDSERAWDAAAASPDAASPQAPSVRSPSPDARDPARAKLLEAIARQRPFHCNGCGMRFKLKHHLTRHTHNPTACLQQSRLHAGVHSDQPAEARPYICAGCGMRFKLKHHLKRHSRSPKACEGAAVIYQLADAPALAGGTSPASFEASNSSRETGRAGSVDSPKSMSDSGYVSGESSASMQSEKRLTASAPSQQQQQQQKQEQQPEPRSVAFPYGFNLSGDVPQLQSQLQSQSQSQQYGQAPLYYPSASYPLQASVLYYAQAPMHQMHIQQQQQQQQQQQQQQQQQLSMQQQSMQMQTHSYDMPFQGQRWQPPMQYHYHNNLNNNNNNSNNNNSTFATSDHEPVRRTTAAAAMAQLAQAAQQASSYSVPVRV* # ORIGINAL: g13165.t1 original gene structure, not modified by PASA NODE_1354_length_11810_cov_43.7619 AUGUSTUS gene 151 5558 . + . ID=g13165;Name=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS mRNA 151 5558 . + . ID=g13165.t1;Parent=g13165;Name=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 151 291 . + . ID=g13165.t1.exon1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 151 291 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 584 1015 . + . ID=g13165.t1.exon2;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 584 1015 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 1432 1533 . + . ID=g13165.t1.exon3;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 1432 1533 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 1847 1977 . + . ID=g13165.t1.exon4;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 1847 1977 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 2195 2435 . + . ID=g13165.t1.exon5;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 2195 2435 . + 1 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 2839 3032 . + . ID=g13165.t1.exon6;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 2839 3032 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 3525 3851 . + . ID=g13165.t1.exon7;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 3525 3851 . + 1 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 4254 4335 . + . ID=g13165.t1.exon8;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 4254 4335 . + 1 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 4503 4632 . + . ID=g13165.t1.exon9;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 4503 4632 . + 0 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 4831 5136 . + . ID=g13165.t1.exon10;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 4831 5136 . + 2 ID=cds.g13165.t1;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 5392 5558 . + . ID=g13165.t1.exon11;Parent=g13165.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 5392 5558 . + 2 ID=cds.g13165.t1;Parent=g13165.t1 #PROT g13165.t1 g13165 THAYPADELMPLSCKGRVRGVTPDRGDIDEALGGFSLTLIDAMDTMAVLGDIDGFHDAIDRAVADVRFDSDLVVSVFETNIRVVGGLLSAHVLALDIASNEDVVTGRRFGPLRRPFAYDGHSLLDMAEDIASRLMPAFNTPTGIPRPRVNLRRGVLPEMLSRDRTTCTACAGTILMEFGALSRLTGNASYENAARRAMKSLWDRSHTNGLVGNVIDVLSGQWIRQDSGIGAGIDSYYEYCLKTSLLLHDGLAHEAFNRHYDAVMTHLKRGSMFVDVQMHQPWMLSRNIMDSLQAFWPGLQVLHGDIESAIQTHRVYAELSRKFGFMPEAFNFELEAVWNGHPLRPEFAESTYHLYRATGDHYYLEVGRDIITAMNTRTRVECGFACVADVTTGRLEDRLDSYVLAENFKYLYLLFAEDSDTPIDVEQYVFTTEAHLLPLSLGLVKAGGGVEDAPHSSRAGARRASVKATVVLPPVCPNNLQQIRRGLFMEYIEQKGRAFEKPPTKKEQGRGPGESGSAPAEPEIPLENLNLELPEHVVYLQRRGVHVISMGGSKYQLQHSFGNGVPAHLATEGLTIVSRLVELHKKRQLSDKKAEAHPLRVSVLSPSALRAELSAGPALFGPRLLDGVSVTGLGMLTYPYDACGPLASPVNGVPVEDLDSSPYRDKIVVVQRGNCMFVDKARRAQAVGAVAIIIVDNSDDETFFAMTGDEKNDVSIFAAFLTKKDGRHVRQAIALNGLLAIAGEPDPAQV* # ORIGINAL: g13167.t1 original gene structure, not modified by PASA NODE_1354_length_11810_cov_43.7619 AUGUSTUS gene 8969 10968 . - . ID=g13167;Name=g13167.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS mRNA 8969 10968 . - . ID=g13167.t1;Parent=g13167;Name=g13167.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 9251 10968 . - . ID=g13167.t1.exon1;Parent=g13167.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 9251 10968 . - 0 ID=cds.g13167.t1;Parent=g13167.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS exon 8969 9089 . - . ID=g13167.t1.exon2;Parent=g13167.t1 NODE_1354_length_11810_cov_43.7619 AUGUSTUS CDS 8969 9089 . - 1 ID=cds.g13167.t1;Parent=g13167.t1 #PROT g13167.t1 g13167 MGPPDDVFEDPVGSVGRGTSDAVSALSGQMQSQLSFSFGPRFDGPYTIDYLPEEILVQIFGLLTYRELAQVARVSKAWRKISADNSLWRTLYKRRFFSRKVQRQPTQGSVIDLTWKSLFVKMYKRQRALPNNEIKVENHRALLCLSPMTNLLLCSPGNISGLSRWLLVERCSEGGLNENNSADFCVLQRQLNTGPISLINRNTQHTVVAFHRICNAVFCTLSWWIMLVPLSALTVGNALDSLHGLLPHAADAALDTDAVSLSLSCDPSSPHGCPSVVSLVGSGAVSRASLGPEDSLPFQLALLLTGVACWYGHVSRQMLAERVSWLHLAVTTTVAFAICRVLAQFSPLMMSDSIVFILMFCSSMANVVFKHRLLNVQYPNVETALCLQFLVGMLTLSGAGAHNIRSFAQGITGVTLSHIGDVCGPRAPACVFARNAEVSGWGQHLGNLLLLIILDRFAAHVPNALIVAFSAATAVAYAAWCTLGAAAAVVSFACVYPLAVNAVAVVVGQTRRRPQPPPQVTPRNLALVTCMALSFAGGFATLDMDVPTFLVEFSVLFLFRYSCTNLYVVVNNRDQLTDLANLSYYGLLFGILYVVGASFVAVLIPVMAIVAS* # PASA_UPDATE: g8273.t1, single gene model update, valid-1, status:[pasa:asmbl_5303,status:12], valid-1 NODE_2957_length_4642_cov_34.8445 . gene 4214 4591 . - . ID=g8273;Name=g8273.t1 NODE_2957_length_4642_cov_34.8445 . mRNA 4214 4591 . - . ID=g8273.t1;Parent=g8273;Name=g8273.t1 NODE_2957_length_4642_cov_34.8445 . five_prime_UTR 4504 4591 . - . ID=g8273.t1.utr5p1;Parent=g8273.t1 NODE_2957_length_4642_cov_34.8445 . exon 4214 4591 . - . ID=g8273.t1.exon1;Parent=g8273.t1 NODE_2957_length_4642_cov_34.8445 . CDS 4291 4503 . - 0 ID=cds.g8273.t1;Parent=g8273.t1 NODE_2957_length_4642_cov_34.8445 . three_prime_UTR 4214 4290 . - . ID=g8273.t1.utr3p1;Parent=g8273.t1 #PROT g8273.t1 g8273 MDVTVFPTEHGDAILAKAVALAGKERAQHHYTDVGGFHLRCGQCGTVVVGEKGAQAHAHATGHSQFGEVD* # ORIGINAL: g8272.t1 original gene structure, not modified by PASA NODE_2957_length_4642_cov_34.8445 AUGUSTUS gene 153 3598 . - . ID=g8272;Name=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS mRNA 153 3598 . - . ID=g8272.t1;Parent=g8272;Name=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 3556 3598 . - . ID=g8272.t1.exon1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 3556 3598 . - 0 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 3244 3316 . - . ID=g8272.t1.exon2;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 3244 3316 . - 2 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 2044 2986 . - . ID=g8272.t1.exon3;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 2044 2986 . - 1 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 1749 1845 . - . ID=g8272.t1.exon4;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 1749 1845 . - 0 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 1345 1508 . - . ID=g8272.t1.exon5;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 1345 1508 . - 2 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 926 1077 . - . ID=g8272.t1.exon6;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 926 1077 . - 0 ID=cds.g8272.t1;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS exon 153 716 . - . ID=g8272.t1.exon7;Parent=g8272.t1 NODE_2957_length_4642_cov_34.8445 AUGUSTUS CDS 153 716 . - 1 ID=cds.g8272.t1;Parent=g8272.t1 #PROT g8272.t1 g8272 MMTRDHSGDESEEEGDAGSRRVRRTAAKKTGGSALQNLRDMRNGGNISNLKLMEDDEEIDTEGYDEYKDMYGASRESDRGNPVAKRRRVAAPDDRNKVPTGPQSHRLSTMFQSAAAKQHSSVVSKLTAGRGGASDAAGVAGGADDGSGSILSSLLADLQANPLGTSASAPVSSFATLTAPNSARYVAPSVAAKAVSGGDDAAIASEWNDVDFGGNENDVDVEMHDAREEKASAPSHPRQMQAAQTASSAPRSVVASSGSSAGAVVVKKEEAMDVDADIKPVVRAAAPVAPLVLSSPPDNKAYAADALLSPTSAAQNCTLPLTKGEDGEDVLRMYWLDAVEEYATPGVVYLFGKVATENRFVSICVSVSNIQRTVYFLPREKRVDESDHVTDEPVEIGDVYGEVQEVMNKQRIPRFLSKPVERKFAFDRDGSVPALAQYLKVKYAPEYPALSPELKGRTFSRVFGTHCTSIEQFLMKRDLMGPAWIELRDVKMSNRPISWCTFDVVVDDMKKVRKCAEQMKPPPLVVLSLSLKTVLNQKHHRNEISTISYVAHRSVETDGPTANPERDSLARTAICKLDGIEFPLDFSDALKNSREVEACANERALLSILLARIHLIDPDVLVGHNFLGFDLSVLLHRMNDLKVPHWSKLGRLRRSNMPKQAMGGSAEASFQERGVLSG # PASA_UPDATE: g2699.t1, single gene model update, valid-1, status:[pasa:asmbl_7563,status:12], valid-1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . gene 3 1297 . + . ID=g2699;Name=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . mRNA 3 1297 . + . ID=g2699.t1;Parent=g2699;Name=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . five_prime_UTR 3 46 . + . ID=g2699.t1.utr5p1;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . exon 3 49 . + . ID=g2699.t1.exon1;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . CDS 47 49 . + 0 ID=cds.g2699.t1;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . exon 393 459 . + . ID=g2699.t1.exon2;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . CDS 393 459 . + 0 ID=cds.g2699.t1;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . exon 742 851 . + . ID=g2699.t1.exon3;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . CDS 742 851 . + 2 ID=cds.g2699.t1;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . exon 1267 1297 . + . ID=g2699.t1.exon4;Parent=g2699.t1 NODE_4721_length_1297_cov_24.4722_potentialcontaminant . CDS 1267 1297 . + 0 ID=cds.g2699.t1;Parent=g2699.t1;3_prime_partial=true #PROT g2699.t1 g2699 MGNEASLLADSKMTLAELQMVSNFSPNELKRLARRFKKLDKDNNGTISPEEFLSLPELHQNPLVSRVIAT # PASA_UPDATE: g7500.t1, single gene model update, valid-1, status:[pasa:asmbl_6160,status:12], valid-1 NODE_3508_length_3310_cov_33.3836 . gene 178 2480 . - . ID=g7500;Name=g7500.t1 NODE_3508_length_3310_cov_33.3836 . mRNA 178 2480 . - . ID=g7500.t1;Parent=g7500;Name=g7500.t1 NODE_3508_length_3310_cov_33.3836 . five_prime_UTR 2291 2480 . - . ID=g7500.t1.utr5p1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . exon 2002 2480 . - . ID=g7500.t1.exon1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . CDS 2002 2290 . - 0 ID=cds.g7500.t1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . exon 1605 1749 . - . ID=g7500.t1.exon2;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . CDS 1605 1749 . - 2 ID=cds.g7500.t1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . exon 993 1205 . - . ID=g7500.t1.exon3;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . CDS 993 1205 . - 1 ID=cds.g7500.t1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . exon 665 754 . - . ID=g7500.t1.exon4;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . CDS 665 754 . - 1 ID=cds.g7500.t1;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . exon 178 338 . - . ID=g7500.t1.exon5;Parent=g7500.t1 NODE_3508_length_3310_cov_33.3836 . CDS 178 338 . - 1 ID=cds.g7500.t1;Parent=g7500.t1;3_prime_partial=true #PROT g7500.t1 g7500 MSFGDQLERGNAQRTFGAAPPAPRTTNTAPASRNAYTPASTLTSSSTSNQYRDGQYGQSAQYGAPRQPTQSYGGGGASTNSSYGGTYQSTALALNPVSSSDSDYNRAFDRITKTIFEVSNNVASIQRLVGALGTPKDTEENRRKLNETRDATRRQIRGVTGDMKQLALMASDGRDMQQRSVRQQKLSRDFQDILKQFEAVEKNAAVKEKATIARAKEQRSFGRPTRNYDDEEGEGEDASFVVSNKRAQQQQQLDHEIEYNESLIIEREREIREIEHAIIEVNEIFRDLASIIADQGQLI # ORIGINAL: g13023.t1 original gene structure, not modified by PASA NODE_3081_length_4375_cov_39.2184 AUGUSTUS gene 324 525 . + . ID=g13023;Name=g13023.t1 NODE_3081_length_4375_cov_39.2184 AUGUSTUS mRNA 324 525 . + . ID=g13023.t1;Parent=g13023;Name=g13023.t1 NODE_3081_length_4375_cov_39.2184 AUGUSTUS exon 324 525 . + . ID=g13023.t1.exon1;Parent=g13023.t1 NODE_3081_length_4375_cov_39.2184 AUGUSTUS CDS 324 525 . + 1 ID=cds.g13023.t1;Parent=g13023.t1 #PROT g13023.t1 g13023 AFVTGNFKKDLTRDLRGLSESQVAEIQKWVDFYDSSTKYFFVGIVKRSPNEITDDEEGLSMIDVDV* # PASA_UPDATE: g13024.t1, single gene model update, valid-1, status:[pasa:asmbl_5530,status:12], valid-1 NODE_3081_length_4375_cov_39.2184 . gene 730 3815 . - . ID=g13024;Name=g13024.t1 NODE_3081_length_4375_cov_39.2184 . mRNA 730 3815 . - . ID=g13024.t1;Parent=g13024;Name=g13024.t1 NODE_3081_length_4375_cov_39.2184 . five_prime_UTR 3738 3815 . - . ID=g13024.t1.utr5p1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 3669 3815 . - . ID=g13024.t1.exon1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 3669 3737 . - 0 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 3275 3364 . - . ID=g13024.t1.exon2;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 3275 3364 . - 0 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 2638 2828 . - . ID=g13024.t1.exon3;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 2638 2828 . - 0 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 2413 2503 . - . ID=g13024.t1.exon4;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 2413 2503 . - 1 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 2097 2197 . - . ID=g13024.t1.exon5;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 2097 2197 . - 0 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 1687 1818 . - . ID=g13024.t1.exon6;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 1687 1818 . - 1 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . exon 730 1233 . - . ID=g13024.t1.exon7;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . CDS 1131 1233 . - 1 ID=cds.g13024.t1;Parent=g13024.t1 NODE_3081_length_4375_cov_39.2184 . three_prime_UTR 730 1130 . - . ID=g13024.t1.utr3p1;Parent=g13024.t1 #PROT g13024.t1 g13024 MSVRTYNPRVRVGNWNEDLYLEEEKTREFTRRKQTGQLAIHKAQRLLSQTLHPVSLKRSADGYVHFGDLVTLSNVGTNTLLSVDVPEDNAEQLQPGCPLSGSRDTQPRARCTFVVTRVPGEDSDDDGVLRYGQGFYLQASPELSDIPLYLHSERISFSHYAKRSRHQEAILGPDTSSTDVWQVLSYDPQMRLEMEGEPVPVNKKIVFNHRFTNQNLYCNEKYAYRNHFGGEYEVSTKTSLDTHKAELPDNHWVFAAPQ* # PASA_UPDATE: g11422.t1, single gene model update, valid-1, status:[pasa:asmbl_627,status:12], valid-1 NODE_1169_length_13402_cov_38.1146 . gene 5291 5841 . + . ID=g11422;Name=g11422.t1 NODE_1169_length_13402_cov_38.1146 . mRNA 5291 5841 . + . ID=g11422.t1;Parent=g11422;Name=g11422.t1 NODE_1169_length_13402_cov_38.1146 . exon 5291 5420 . + . ID=g11422.t1.exon1;Parent=g11422.t1 NODE_1169_length_13402_cov_38.1146 . CDS 5291 5420 . + 0 ID=cds.g11422.t1;Parent=g11422.t1 NODE_1169_length_13402_cov_38.1146 . exon 5636 5841 . + . ID=g11422.t1.exon2;Parent=g11422.t1 NODE_1169_length_13402_cov_38.1146 . CDS 5636 5706 . + 2 ID=cds.g11422.t1;Parent=g11422.t1 NODE_1169_length_13402_cov_38.1146 . three_prime_UTR 5707 5841 . + . ID=g11422.t1.utr3p1;Parent=g11422.t1 #PROT g11422.t1 g11422 MSRRSRACVCSAQVLVEGQLEYGAFTDKDGVHRETATVSLYSPANLKILRYGKDATQGEAPKAASA* # PASA_UPDATE: g11423.t1, single gene model update, valid-1, status:[pasa:asmbl_628,status:12], valid-1 NODE_1169_length_13402_cov_38.1146 . gene 6400 9887 . + . ID=g11423;Name=g11423.t1 NODE_1169_length_13402_cov_38.1146 . mRNA 6400 9887 . + . ID=g11423.t1;Parent=g11423;Name=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 6400 6850 . + . ID=g11423.t1.exon1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 6400 6850 . + 0 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 7044 7267 . + . ID=g11423.t1.exon2;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 7044 7267 . + 2 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 7528 8354 . + . ID=g11423.t1.exon3;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 7528 8354 . + 0 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 8592 8714 . + . ID=g11423.t1.exon4;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 8592 8714 . + 1 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 8965 9301 . + . ID=g11423.t1.exon5;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 8965 9301 . + 1 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . exon 9410 9887 . + . ID=g11423.t1.exon6;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . CDS 9410 9829 . + 0 ID=cds.g11423.t1;Parent=g11423.t1 NODE_1169_length_13402_cov_38.1146 . three_prime_UTR 9830 9887 . + . ID=g11423.t1.utr3p1;Parent=g11423.t1 #PROT g11423.t1 g11423 MMDSVVANSTILSTPRGGDEPAPLVESRVFDKNPGVDTGAAPGRTASTAHSSDAFNNSHVVDTDSANNALAPEPAAPAEVVDADVTPDELIRRRRCFIGLFMLVALLNYDSGAIPSTLTPLSDHFNLGFTEQGLVGSLVYIGLSITSLFAGYLFQRFDMKPLLLTSLVACVGFNVLFAFAPSKIAVLASRVGVGLSQALLIIFTPVWVDEFAPAARRTMWMSIIQAAVPAGIMIGYVVGGIVTRYTSFSFRTPYVVQLVLLGPFTIGMFFVPKAFFAITTTAELTHESGADTAQQQQQQQPSHGDHYVAFSEDSPSPSAAAPPATKPRSQSQASSRVRTFTVASPGSILISPQGSGVTDSTHTSGRTRRVRIDSISASAIRRHSVRPRRSSPYGISGEGETARRGSSLTRQASGEALLQQQLDAQIHEDAMAGSTSALPPPPSATSAEDGLKGRKRKEKKSKKGQETLGAQVRLLLRSRIFMLTVFGLSALYFVVTGIQFWITKYLTDIIGVDLTLVLVAFGATSATAPVMGVFFGGYVVDRLGGYKGRRGLNVASKVASLFGLVAVLCAAPICIVKNFYGIIAAVWVLLFFGGAILPPATGILLSCVPMHLRSLGASISSLFYNLCGYFAGPFISGLVASATDDLQWGFRLVMMWSVFGLLGMVGAWYFARFDHRTAKRAFGKSKAKGRRSLEQSAGGSSADLFKPLLDATRSDESLADVNAAGPSGCLDTGVGVGVGDAVGHVPIPVIEVDASSGDDELTDDMESGDEIVTRNDVVYELSRAQTQRRVSFF* # ORIGINAL: g11421.t1 original gene structure, not modified by PASA NODE_1169_length_13402_cov_38.1146 AUGUSTUS gene 197 3527 . - . ID=g11421;Name=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS mRNA 197 3527 . - . ID=g11421.t1;Parent=g11421;Name=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 2990 3527 . - . ID=g11421.t1.exon1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 2990 3527 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 2758 2825 . - . ID=g11421.t1.exon2;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 2758 2825 . - 2 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 2330 2401 . - . ID=g11421.t1.exon3;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 2330 2401 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 2022 2099 . - . ID=g11421.t1.exon4;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 2022 2099 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 1611 1739 . - . ID=g11421.t1.exon5;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 1611 1739 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 1222 1320 . - . ID=g11421.t1.exon6;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 1222 1320 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 197 997 . - . ID=g11421.t1.exon7;Parent=g11421.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 197 997 . - 0 ID=cds.g11421.t1;Parent=g11421.t1 #PROT g11421.t1 g11421 METDAPIAVSDVDVKIQQEDGDHQAPIVNAIATTEEIAEKPVTAPESDGSDVPSARASVVSADVTSAASITPSETSASAQDGAHVIVATEDDASIPNSLSSSAQGAELAQSLKEVDLGKGSRVSNPAVLAPAAVSSDAAPAESRASTASIASLNSTHDAKRSRSHSFADFVGRHNDSASENKKKWLHAPEDFVGDGIKFDVELVAREEVERPRGVVTIKDVIVKYKDNKPDKSPVNLFVSVSGTRVVDVSTKKVAFKHAIHRILFVSEMGNMVGFLAKEPFSGKHEVLVFESGDAQAERIAITLGQAFEVAYRKFKKDNAIAEDPDFQDVDLAANAAAQSPSKSASGESASAAAVVTASPGGSASKRNSAEAAVASPQAGQAPAATAANSYESARSHKKLSHENLLAFADSGNIKTLVIRKKQNERLGFMIMMSGPHAPVPGIFVSHVFPGSPTAKCGGLSVGDQILTINGTSVVGKHFDETCQLITAVSMGCEVTVQYVPTEAIVEVEFTREAGQRLGFDVLEGEITSVDKGGLADRAGLCIGYRIIEVNGKSLVGFGHDVVVAHLKAAVGNVHIRLMLSQLYHVLVTNNYQR* # ORIGINAL: g11424.t1 original gene structure, not modified by PASA NODE_1169_length_13402_cov_38.1146 AUGUSTUS gene 10096 13159 . - . ID=g11424;Name=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS mRNA 10096 13159 . - . ID=g11424.t1;Parent=g11424;Name=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 12873 13159 . - . ID=g11424.t1.exon1;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 12873 13159 . - 0 ID=cds.g11424.t1;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 11814 12611 . - . ID=g11424.t1.exon2;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 11814 12611 . - 1 ID=cds.g11424.t1;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 10708 11583 . - . ID=g11424.t1.exon3;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 10708 11583 . - 1 ID=cds.g11424.t1;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS exon 10096 10468 . - . ID=g11424.t1.exon4;Parent=g11424.t1 NODE_1169_length_13402_cov_38.1146 AUGUSTUS CDS 10096 10468 . - 1 ID=cds.g11424.t1;Parent=g11424.t1 #PROT g11424.t1 g11424 MTGCARAVLRRSGAIKTFSFEARCVAVPWVRAVATPRWNANLRVIRTIGISDPVRLCRAHLHSATATRASAGVDVSELLLTYGDNHVKLAHLLCDRHVDGSNLALRYEDQDGHTQTLTYAELSVLSSSFARFLQRDAGVKKGDRVAILLPRTVELMVAAVAVWRLGAVYVPLFCAFGSEAIHYRLDNSGAKVIVTDHANRAKVGLPVVRSVAAAASTSTAAGMAQPADDALSAHVGRHQGAGRKRRQNDAQRHISTTLYTLDANKAEAAQEGRGAGLGGSGIVVVNTSLKADGDAADGQRSFWQAVSADAEKTVLPPAVVEGESPIALVYTSGTTGKAKGVIVPARALASFEMYMRCGLEVRPDDRFMNMGDPGWAYGLYYALLGPLALGATTIFLNARFEPARCLAALQKYRVTNFAAAPTVYRAMRGAHLSAHSMTSNGGSDGAAASRAGHVAHSLRRASSAGEPLEPEVSRWGESFFGVRIRDHYGQTELGMVAGQTEGTAAGADCEGESAPADPSLAAGISSMGHALPGFSLAVVRPTDEAVRAVSSESKGNASCGGVGGDGALEDDGVVLPDGTAGELAVDVGNSPLFWFRGYLGNEAQTASRFGSRGHYLTGDVALRHARTGEYVFTGRADDVIKTAGYRVGPFEVESALAAHPQVVEAAVIGVPDDVKGLVIKAFLVLAPHAHAYAHPHPHTHSNAPHAASIASGASELGRHSQAYVRLVDELKLAVRSTVGSHAVPRQFEIVDALPKTPSGKVQRNVLKQREQERASSQ* # PASA_UPDATE: g11318.t1, single gene model update, valid-1, status:[pasa:asmbl_3462,status:12], valid-1 NODE_2087_length_7798_cov_41.7346 . gene 2989 7698 . - . ID=g11318;Name=g11318.t1 NODE_2087_length_7798_cov_41.7346 . mRNA 2989 7698 . - . ID=g11318.t1;Parent=g11318;Name=g11318.t1 NODE_2087_length_7798_cov_41.7346 . exon 6608 7698 . - . ID=g11318.t1.exon1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . CDS 6608 7698 . - 0 ID=cds.g11318.t1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . exon 4214 6315 . - . ID=g11318.t1.exon2;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . CDS 4214 6315 . - 1 ID=cds.g11318.t1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . exon 3843 4052 . - . ID=g11318.t1.exon3;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . CDS 3843 4052 . - 2 ID=cds.g11318.t1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . exon 3552 3677 . - . ID=g11318.t1.exon4;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . CDS 3552 3677 . - 2 ID=cds.g11318.t1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . exon 2989 3341 . - . ID=g11318.t1.exon5;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . CDS 3136 3341 . - 2 ID=cds.g11318.t1;Parent=g11318.t1 NODE_2087_length_7798_cov_41.7346 . three_prime_UTR 2989 3135 . - . ID=g11318.t1.utr3p1;Parent=g11318.t1 #PROT g11318.t1 g11318 MNTTQCGTHTSVTWLSNALADYFILVRTRSAAGGAFRATVDSTMPPCTPACANGGSCVGLNTCTCAPGFEGADCTRPVDPCKGVTCHADGVCAADSRTASCACKAGYKGDGLTVCDDIDECATNVAACHPNATCINTVGSFTCACPSDAVGDGRGDAGCLFRTIPPQAGRYHVGVRAVSASGLLSEVAWSNGVMVDVSPPIVADPQIVSMDSLKKGDVKEIFFHGNATDLATAWAADDAESGIIEYTWAIGTAPNVSDAFGPTTFVVKGKEDFSQRMHAHSLSLLHNTTYVVTVIAVNGARLQSVAWSNGILVDLTAPDATNSVVVTLIDGLDAQSSGGFILSYAQSEMAIRFDGFAEPESFISYYSWAIGSTPGGEQVQQYISVGVAGNTTAYRRPVGTTLLNRTDAEGISMGVYAGDVEHRNETALRKFHAQFLLEPFRGLWNSIKATNAAGLSSVHVAEEPVVAISKTDAVYDSPGAVTAAVPTESDASAALTIVASDADRQTGKPLVVGAVTRERLNEDYTTGAETTRFLQLPGEAPSLTGSLYRADYLNVSFVVSKTVDSALITTTIDPAYFAQLRDDEVVSLMQFDVESMTWRNASLSCPKAVRVHSFDRILGILTVRICPSNTAVDDRPAAAASSSAAPITSSPAPDSTEVLIMTSSVAVPSPSVDASPSASATDGARRRRAIGSSGYNDAVFRQYAVVANKRVNGGSSSDILSAGGIAGVVIGVVCAAALLAVGFVVYKKRKNAEEDGLKIEEKIRTASMVRKTRDDVHLVNPLHDFVMAHGREDSATLDELIDQTPAHMSEFVGRGVSMYDRGKKTRHVTAPEDQQTNTQGVEQVAESTIAEDELAPNAAAAALSTVEVEPLPSEKKWAGSNLEMRQIRTFSMTQREQGDEVVVANPLRAGASAVSHVMRMGEAGKNADFIGRGESLYDEKKAKGALSRLREKRLKEEELAKEEARNAAIEAEQRALVAALAAEEVELAELTRRENEMLRAEEEERELAELAHREPLAGVAEDGLGASREHSEAHSRVQSSDDEAQLMTGPDANVKGFALKAKARASPDDYANTRRAVGINTKWMTMRARKQKLRTTAEHVSTGTSSDSAHTDSGGDDAEESTSLTAAQISTAKRVSIDPKNETRRSQKAPSSVLESLKAVGDVAEDPQVSSDTKARAQVDDFARSRRAVGLNTKWNTRREKVAEMRRPLRTEHVLHVNPMRATTGVNSPHGSGSEGPSDSGMRD* # ORIGINAL: g11317.t1 original gene structure, not modified by PASA NODE_2087_length_7798_cov_41.7346 AUGUSTUS gene 806 2803 . + . ID=g11317;Name=g11317.t1 NODE_2087_length_7798_cov_41.7346 AUGUSTUS mRNA 806 2803 . + . ID=g11317.t1;Parent=g11317;Name=g11317.t1 NODE_2087_length_7798_cov_41.7346 AUGUSTUS exon 806 2803 . + . ID=g11317.t1.exon1;Parent=g11317.t1 NODE_2087_length_7798_cov_41.7346 AUGUSTUS CDS 806 2803 . + 0 ID=cds.g11317.t1;Parent=g11317.t1 #PROT g11317.t1 g11317 MDHGKHHAVAQHDAGKVSVAELKGLVQQYQLPPPAYEASPIKQRTFESFSSMTSQWKQNYERRQHLRSCGFGSSKKEPYAPVGSIALALDDLIATGLGTDHSQDEGDAEDVDAREEAEHRLASSTRTASSPHSRGYSHASGKDAAASAAVPRAVSRAASQGGSPGDAPVASPRSAHVSNPRRAVSAATLARIKSQRPKRPATSLENGYAQLRKELVDAERRIKAVRAGSSFVHDLPDSDDEVHPVVGADVPADIARLSNGDTVDTMRSPGATLTTTGRPGTRTGGVKSSMKSSLPVAADSVRTWDDMLIHGQQQQQARTKRASVAIDDGNSGQTIVPTQAPAGGVPPPPPPPPLPSLLPSQSSPKSRRGSQSPRRASTAVGFFTTFSDLDDQLGGGFWMSDQLEARLDQYVDGFKRARSSMAGRLEGTLHRLDSRRAKVLRNKFTALGMDTGPTLDVVRDLELMRLRATELRTNKKTHVEPLGWCDEIHVFVRTTRGDQITTGEDMILKRFRRLAESGAKLTKEGLLAIANSLPASEQAQGEVRNLLRVARQLVLRLSRAELLSWIASIGTTLPAALDAEDGPVPPPTDPTSSRAQIANLVSRSGMYISAEPSRAPTSMASHNSRPHSGRVNSAGAQGRMSSASADDDLGESQRSALRKRETSVH* # ORIGINAL: g4068.t1 original gene structure, not modified by PASA NODE_587_length_20551_cov_41.3509 AUGUSTUS gene 9238 11845 . - . ID=g4068;Name=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS mRNA 9238 11845 . - . ID=g4068.t1;Parent=g4068;Name=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 11745 11845 . - . ID=g4068.t1.exon1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 11745 11845 . - 0 ID=cds.g4068.t1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 11479 11564 . - . ID=g4068.t1.exon2;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 11479 11564 . - 1 ID=cds.g4068.t1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 10759 11369 . - . ID=g4068.t1.exon3;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 10759 11369 . - 2 ID=cds.g4068.t1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 10371 10522 . - . ID=g4068.t1.exon4;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 10371 10522 . - 0 ID=cds.g4068.t1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 9577 10035 . - . ID=g4068.t1.exon5;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 9577 10035 . - 1 ID=cds.g4068.t1;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 9238 9385 . - . ID=g4068.t1.exon6;Parent=g4068.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 9238 9385 . - 1 ID=cds.g4068.t1;Parent=g4068.t1 #PROT g4068.t1 g4068 MDVDFERRVTGSPASPWRSPRGKGGKGGVDLCDRLIPSRKNSDFHLLQSNASGDLETDVNPKEDSSSLYLRLLSTEFRQTSSGLGGFSVSGNVGSAALTSYTSALTPSPGDAAIYGDENAIYEGTRGVGHARAGAATPDAPIVRIARTQGSARPGILQYRSLPAGTPIDPEDALSLSPVGREGRALLASQTRHPRKIPKVPFKVLDAPELQDDFYLNLVDWSSQNVLGVALGASVYLWSACTSHVTKLCDLAPEGDAVNAIAWHKRGTHIAVGTMKGLVQIWDVAQEKRVRVMDGHLSRVGTLAWSNALLASGSRDRSILLRDLRAPGNFTSKLEGHRQEVCGLRWSPDEEQLASGGNDNKLFVWGRTHTTPIQRFAEHTAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTVTGQALQHTDTGSQVCNLVWSKTVNEIVSTHGYSQNQIVVWKYPSMRQIATLTGHTYRVLYLAMSPDGQTIVTGAGDETLRFWNVFSKSRSPQNKPSPLNLFSQIR* # ORIGINAL: g4071.t1 original gene structure, not modified by PASA NODE_587_length_20551_cov_41.3509 AUGUSTUS gene 19686 20424 . + . ID=g4071;Name=g4071.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS mRNA 19686 20424 . + . ID=g4071.t1;Parent=g4071;Name=g4071.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 19686 20038 . + . ID=g4071.t1.exon1;Parent=g4071.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 19686 20038 . + 0 ID=cds.g4071.t1;Parent=g4071.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 20190 20424 . + . ID=g4071.t1.exon2;Parent=g4071.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 20190 20424 . + 1 ID=cds.g4071.t1;Parent=g4071.t1 #PROT g4071.t1 g4071 MGGADAMLHTDGLVVPGYVITSKIYSGVQTACFRAHLASDPSIGVIIKTHGSGTNEAASVEELARIRHEYNILKSFDFDGVPRALGLVPHKNGLALVVEDFDHAVSMREMMRAGPLDRSKFLPLAIELTKVLALIHAAGVIHKDIKPANVKVNSKTMEVQIIDFSISTRLAAEDLGANASATAAYEGSVGEDNLQ* # ORIGINAL: g4067.t1 original gene structure, not modified by PASA NODE_587_length_20551_cov_41.3509 AUGUSTUS gene 4913 8605 . + . ID=g4067;Name=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS mRNA 4913 8605 . + . ID=g4067.t1;Parent=g4067;Name=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 4913 5194 . + . ID=g4067.t1.exon1;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 4913 5194 . + 0 ID=cds.g4067.t1;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 5407 5629 . + . ID=g4067.t1.exon2;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 5407 5629 . + 0 ID=cds.g4067.t1;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 6003 6214 . + . ID=g4067.t1.exon3;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 6003 6214 . + 2 ID=cds.g4067.t1;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 6545 8605 . + . ID=g4067.t1.exon4;Parent=g4067.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 6545 8605 . + 0 ID=cds.g4067.t1;Parent=g4067.t1 #PROT g4067.t1 g4067 MMASGKDVQVLYRSSVGKFGDKGAHAETSEKLAAFVVLDAIGREHNAINRRFAEDLGAAVAEVREGAVNGRVAVVVFVSAKKDSFVVGADIEDEICTYRDASVAARDSQALQGLFTAIECLPIATIAVLWGHCLGGGFELALACDYRLYVDGAPCTVGLPEVKIGLIPGAGGCVRLTRLIGLSKALPLILRGASLDAAAAARGRILSGVIGVSLNGSASFRDLVADSGRDSLIGALYGPKRFNAPLDTGAKFKREEGPLRWWIGRQLLYFVARTQLSRASIHPFPAPYHALYACVVGAAASIESALAVEAAQFGCVAVTPEAKSLMTLFRAGSSTRRRALAGDSSISARSAGSREVQTEKDGIATGDWMTAHGIVIVGAARPSASLAQSYIKAGIRVHVVDANEESLRTLLGDVTKMLSTNVRGGEGGSDKMKLLSTGTSLDCPFVKTAKFAIVNSRRLAWPLPSNGSSEIDVHSLQLGRRSTKAPSAVDFHAMSGDAAADSAVVATHATLAALDGSRDCAVAVNMSGWSASHMSRAVARASDALASLGGHVPSSAGPRKQHAVCGINIASVASVTRPGVIAPPAACAELYPFEASDVSAVRRCAVAVSRGGRTPVLAAGPHGHIVDHLVRAWFSVASALLFDGNCTIGFVERCARDFGFVSGPLGLIDRMGLRECLTGGLGAWSRARRTGETSPGQLGGADIDEDLLCGALEVLAGGGHDGCDPVTGSGCGFLRYAGARVVGVNPAAVTAVAVAARERECRRLTPLRQWSLLRWGIVSSAEVVDALVLSLSNEACRLAASTGIPVEEIDLLCVLALGFPAHHGGPISYADRRGCASCVRALAGVSSRLRLAEGPLTPCPAFVRAASSSSRFYPLIPPETAGGLKSGAVPWMLPMGRVGTVVTCTFFIALFLFAMMTATEYQLVR* # ORIGINAL: g4069.t1 original gene structure, not modified by PASA NODE_587_length_20551_cov_41.3509 AUGUSTUS gene 12274 14186 . + . ID=g4069;Name=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS mRNA 12274 14186 . + . ID=g4069.t1;Parent=g4069;Name=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 12274 12369 . + . ID=g4069.t1.exon1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 12274 12369 . + 0 ID=cds.g4069.t1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 12504 12687 . + . ID=g4069.t1.exon2;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 12504 12687 . + 0 ID=cds.g4069.t1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 12818 12937 . + . ID=g4069.t1.exon3;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 12818 12937 . + 2 ID=cds.g4069.t1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 13139 13236 . + . ID=g4069.t1.exon4;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 13139 13236 . + 2 ID=cds.g4069.t1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 13490 13616 . + . ID=g4069.t1.exon5;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 13490 13616 . + 0 ID=cds.g4069.t1;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 13783 14186 . + . ID=g4069.t1.exon6;Parent=g4069.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 13783 14186 . + 2 ID=cds.g4069.t1;Parent=g4069.t1 #PROT g4069.t1 g4069 MLPFVLRTLRPCLHFGRRSAQTFAYSTHANPFITDNTRWLRIEQGIKPEGPPRRPVDPDRAARGLPKRFPLAGVKQIVVVASGKGGVGKSTTAVNLALALSAQDKDVGLLDADIFGPSIPRMMNLTGQPTLDAKNRMEPLRNFGIKCMSMGFLVDEGAPIVWRGLMVMSAIEKLLRGVAWGDLDYLVVDMPPGTGDTQLTLCQQVPIAGAVIVTTPQDIALIDARRGAEMFRKVDVPVVGIVQNMSTFVCPNCNHETHIFGHDGAHGTARDLGVDVIADIPLHITIRETSDSGKPIVISHPTSAEAKAYLKLADEVVRRLPKPTDPLMAMSPSTAPVPPSSL* # PASA_UPDATE: g4070.t1, single gene model update, valid-1, status:[pasa:asmbl_8327,status:3], valid-1 # PASA_UPDATE: g4070.t2, single gene model update, valid-1, status:[pasa:asmbl_8326,status:12],[pasa:asmbl_8328,status:12], valid-1 NODE_587_length_20551_cov_41.3509 . gene 15217 18138 . + . ID=g4070;Name=g4070.t2 NODE_587_length_20551_cov_41.3509 . mRNA 15217 18138 . + . ID=g4070.t1;Parent=g4070;Name=g4070.t2 NODE_587_length_20551_cov_41.3509 . five_prime_UTR 15217 15476 . + . ID=g4070.t1.utr5p1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . exon 15217 15854 . + . ID=g4070.t1.exon1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . CDS 15477 15854 . + 0 ID=cds.g4070.t1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . exon 16026 16238 . + . ID=g4070.t1.exon2;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . CDS 16026 16238 . + 0 ID=cds.g4070.t1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . exon 16474 16647 . + . ID=g4070.t1.exon3;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . CDS 16474 16647 . + 0 ID=cds.g4070.t1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . exon 17022 17141 . + . ID=g4070.t1.exon4;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . CDS 17022 17141 . + 0 ID=cds.g4070.t1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . exon 17487 18138 . + . ID=g4070.t1.exon5;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . CDS 17487 17732 . + 0 ID=cds.g4070.t1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . three_prime_UTR 17733 18138 . + . ID=g4070.t1.utr3p1;Parent=g4070.t1 NODE_587_length_20551_cov_41.3509 . mRNA 15229 18138 . + . ID=g4070.t2;Parent=g4070;Name=g4070.t2 NODE_587_length_20551_cov_41.3509 . five_prime_UTR 15229 15476 . + . ID=g4070.t2.utr5p1;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . exon 15229 15854 . + . ID=g4070.t2.exon1;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . CDS 15477 15854 . + 0 ID=cds.g4070.t2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . exon 16026 16238 . + . ID=g4070.t2.exon2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . CDS 16026 16238 . + 0 ID=cds.g4070.t2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . exon 16474 16647 . + . ID=g4070.t2.exon3;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . CDS 16474 16647 . + 0 ID=cds.g4070.t2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . exon 17037 17141 . + . ID=g4070.t2.exon4;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . CDS 17037 17141 . + 0 ID=cds.g4070.t2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . exon 17487 18138 . + . ID=g4070.t2.exon5;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . CDS 17487 17732 . + 0 ID=cds.g4070.t2;Parent=g4070.t2 NODE_587_length_20551_cov_41.3509 . three_prime_UTR 17733 18138 . + . ID=g4070.t2.utr3p1;Parent=g4070.t2 #PROT g4070.t1 g4070 MLATLPPHRAMAEEGVTRTSVTTLPAYAKVDSTAKFCEDGEAQLYAIASTVAEELKSVDFDALSYTNTELAVLLEIMIDHGLGLVESLKMNRTKLRSFLRVMQTNYNDDEHVPYHCWRHAFYVSQMMYTIVFNCNLRRTFTDLDLLTLMLSCIAHDVGHMGLNNAYHKSAQTDLFTKYPVSTLESFHVDITLGVLSKSEYDVLDFLAPTEHQAVADHIVRNILTTDMAMHFDKMKEVEKMHAEGRTLNDRNCQMLFASSQVMELLVKACDVSNEARTPDVCDKWAERLNDEFFKQGDRELAEGLQVTPRMDRRTVSKAAAQTFFIRMFSLPLYEAIGVSFPSFSEIYVPRLRTVYEFYVKMEEADKLAASLKPSAT* #PROT g4070.t2 g4070 MLATLPPHRAMAEEGVTRTSVTTLPAYAKVDSTAKFCEDGEAQLYAIASTVAEELKSVDFDALSYTNTELAVLLEIMIDHGLGLVESLKMNRTKLRSFLRVMQTNYNDDEHVPYHCWRHAFYVSQMMYTIVFNCNLRRTFTDLDLLTLMLSCIAHDVGHMGLNNAYHKSAQTDLFTKYPVSTLESFHVDITLGVLSKSEYDVLDFLAPTEHQAVADHIVRNILTTDMAMHFDKMKEVEKMHAEGRTLNDRNCQMLVMELLVKACDVSNEARTPDVCDKWAERLNDEFFKQGDRELAEGLQVTPRMDRRTVSKAAAQTFFIRMFSLPLYEAIGVSFPSFSEIYVPRLRTVYEFYVKMEEADKLAASLKPSAT* # ORIGINAL: g4066.t1 original gene structure, not modified by PASA NODE_587_length_20551_cov_41.3509 AUGUSTUS gene 89 3502 . + . ID=g4066;Name=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS mRNA 89 3502 . + . ID=g4066.t1;Parent=g4066;Name=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 89 292 . + . ID=g4066.t1.exon1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 89 292 . + 0 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 528 698 . + . ID=g4066.t1.exon2;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 528 698 . + 0 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 1069 1193 . + . ID=g4066.t1.exon3;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 1069 1193 . + 0 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 1398 1570 . + . ID=g4066.t1.exon4;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 1398 1570 . + 1 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 1910 2045 . + . ID=g4066.t1.exon5;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 1910 2045 . + 2 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 2204 2458 . + . ID=g4066.t1.exon6;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 2204 2458 . + 1 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 2719 2825 . + . ID=g4066.t1.exon7;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 2719 2825 . + 1 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 3073 3225 . + . ID=g4066.t1.exon8;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 3073 3225 . + 2 ID=cds.g4066.t1;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS exon 3417 3502 . + . ID=g4066.t1.exon9;Parent=g4066.t1 NODE_587_length_20551_cov_41.3509 AUGUSTUS CDS 3417 3502 . + 2 ID=cds.g4066.t1;Parent=g4066.t1 #PROT g4066.t1 g4066 MPASAFTNPTAELGDSPRQFYQVIYWLNVFDSFALVMFSLEICLKWVDDWQGFWKDGWNVFDFFITLLSALPVIIELSPAALDHRSGIYKTAKTLRAFRVLRTFKMVVRFGSLRIIVLTILQAFQSMAVFMLLLSIMSYIFAIIAISIFDSYTKSKRTDLDYHNSFSSLPRTLATIFQLLTFDHWWAIWHDVSKVINPGLTAIFILSWVWVGGFIMKNIFVGVMVNNFSNISNMLQQQQQTVQKQRQMDKMRRRLNKELERQDLKRHASRFNLGVADEAAVNAELNRDIPHDPNDNTNGASKDANQPEITPINVPDGAADGFVGQGGAGGAPPAIAVESDHSIGGRAPGLDILDASVSRPNLLRRASAASAHDVRRRMSELMMETQDDAIGWEATVAENLASLAANRNETMWPRDTLFKYYQLMETLQENMKEYQELQTLAFISASNLFFSLFRLHPSAALALLELHDS* # ORIGINAL: g2323.t1 original gene structure, not modified by PASA NODE_3916_length_2517_cov_83.4873_potentialcontaminant AUGUSTUS gene 2095 2430 . - . ID=g2323;Name=g2323.t1 NODE_3916_length_2517_cov_83.4873_potentialcontaminant AUGUSTUS mRNA 2095 2430 . - . ID=g2323.t1;Parent=g2323;Name=g2323.t1 NODE_3916_length_2517_cov_83.4873_potentialcontaminant AUGUSTUS exon 2095 2430 . - . ID=g2323.t1.exon1;Parent=g2323.t1 NODE_3916_length_2517_cov_83.4873_potentialcontaminant AUGUSTUS CDS 2095 2430 . - 0 ID=cds.g2323.t1;Parent=g2323.t1 #PROT g2323.t1 g2323 MPETIDEPIAVEKAAAAEQDERHAAKMKRKLSEKQKLALLNARSTKSKNAAQKKKEKVETELMQRIAAAQKKPTEEVQFWHSAINWKKAVVLIQSRFLCYATRGLFAEVPN* # PASA_UPDATE: g12973.t1, single gene model update, valid-1, status:[pasa:asmbl_4168,status:3], valid-1 NODE_2374_length_6513_cov_41.2804 . gene 4246 6316 . - . ID=g12973;Name=g12973.t1 NODE_2374_length_6513_cov_41.2804 . mRNA 4246 6316 . - . ID=g12973.t1;Parent=g12973;Name=g12973.t1 NODE_2374_length_6513_cov_41.2804 . five_prime_UTR 6269 6316 . - . ID=g12973.t1.utr5p1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . exon 6175 6316 . - . ID=g12973.t1.exon1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . CDS 6175 6268 . - 0 ID=cds.g12973.t1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . exon 5783 5964 . - . ID=g12973.t1.exon2;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . CDS 5783 5964 . - 2 ID=cds.g12973.t1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . exon 5231 5605 . - . ID=g12973.t1.exon3;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . CDS 5231 5605 . - 0 ID=cds.g12973.t1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . exon 4246 4992 . - . ID=g12973.t1.exon4;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . CDS 4339 4992 . - 0 ID=cds.g12973.t1;Parent=g12973.t1 NODE_2374_length_6513_cov_41.2804 . three_prime_UTR 4246 4338 . - . ID=g12973.t1.utr3p1;Parent=g12973.t1 #PROT g12973.t1 g12973 MSLDPNNKNYRFETLQLHAGQKPAEGTNSRAVPIHATTSYTFNTAQHGANLFALKELGYIYSRLHNPTTSVFEERLAALEGGVGALATSSGMAAQFIAITNIAVAGDNIVSTSFLYGGTYNQFKVTLPRLGINVKFVNGDDPAEFERLIDDKTRAVYLETIGNPRFNVADFDAIAEVAHKKGVAVIVDNTFGIGGYLFRPFDHGADVVVASTTKWIGGHGTTIGGVVVDSGKFNWANGRYSLFTDPSPGYHGLKYHETFGPVAFIFRARLEGMRDIGANPNPFGSFQNIIGIETLSLRAQRHVDNALVLAQWLEKREDVAWVSYPGLASHQYHANAKKYLRNGFGAVLSFGIKGGAAAAEKFINSVKLASHLANVGDAKTLVIAPAVTTHQQLSEDEQKSSGVTPDMVRVSVGIEHIDDIKEDFEQAFAAVAQQ* # ORIGINAL: g12972.t1 original gene structure, not modified by PASA NODE_2374_length_6513_cov_41.2804 AUGUSTUS gene 2364 3966 . - . ID=g12972;Name=g12972.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS mRNA 2364 3966 . - . ID=g12972.t1;Parent=g12972;Name=g12972.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS exon 3858 3966 . - . ID=g12972.t1.exon1;Parent=g12972.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS CDS 3858 3966 . - 0 ID=cds.g12972.t1;Parent=g12972.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS exon 2364 3658 . - . ID=g12972.t1.exon2;Parent=g12972.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS CDS 2364 3658 . - 2 ID=cds.g12972.t1;Parent=g12972.t1 #PROT g12972.t1 g12972 MEGDAGVIEGSFVEKRAVTGILVRIGHAIRHGAFEEDSNEIEEDLCLLWDLTTDPSIVRYVCASHGVQLVSALIRVLATSRCAVFRLFEVAVGVVANIASSGVDYAALIAADASLVSILPSLIDLPDAPTVTEVFRFLDASLAYSEGRCDDTWECALFESGGVDPLRDANGQLCDGSDGADDELDGVADATPCLRIMSTLANSTNEPLLVRGWSVVSRLVWRFPSLSAVHLVCVPLLYTLAEHVAEEQWGDTVISPAASAFAGIVAAAPNSDNAMRALSDCADVLGSAFSNRICGDAMRGGPLWDDDVRVAHNSGAGGGGGVGNNNGNNSGSSFERAGEDEEGAFSRNAACDLLSYLVDAVGSVPATVDVNAVVSVVLASSRCLGASPTDCESAVRCACTLLQHVPPSPEVSQLASDCVERLWAVWEETGIVRRSEDGSGVCGAMNSDDTVTVDLVAWLRRRLSAFR* # ORIGINAL: g12971.t1 original gene structure, not modified by PASA NODE_2374_length_6513_cov_41.2804 AUGUSTUS gene 528 1210 . + . ID=g12971;Name=g12971.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS mRNA 528 1210 . + . ID=g12971.t1;Parent=g12971;Name=g12971.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS exon 528 632 . + . ID=g12971.t1.exon1;Parent=g12971.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS CDS 528 632 . + 0 ID=cds.g12971.t1;Parent=g12971.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS exon 1097 1210 . + . ID=g12971.t1.exon2;Parent=g12971.t1 NODE_2374_length_6513_cov_41.2804 AUGUSTUS CDS 1097 1210 . + 0 ID=cds.g12971.t1;Parent=g12971.t1 #PROT g12971.t1 g12971 QLRVQAVIKDANDRVAALKEKLKVIESMKAVDELTADDQLAAHPEWAKQIQADWDRYMFFETDTLKKSAEKK* # PASA_UPDATE: g9330.t1, single gene model update, valid-1, status:[pasa:asmbl_5070,status:12],[pasa:asmbl_5071,status:12], valid-1 NODE_2816_length_5067_cov_41.5821 . gene 3623 5040 . - . ID=g9330;Name=g9330.t1 NODE_2816_length_5067_cov_41.5821 . mRNA 3623 5040 . - . ID=g9330.t1;Parent=g9330;Name=g9330.t1 NODE_2816_length_5067_cov_41.5821 . exon 4865 5040 . - . ID=g9330.t1.exon1;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . CDS 4865 5040 . - 0 ID=cds.g9330.t1;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . exon 4311 4430 . - . ID=g9330.t1.exon2;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . CDS 4311 4430 . - 1 ID=cds.g9330.t1;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . exon 3623 4114 . - . ID=g9330.t1.exon3;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . CDS 3916 4114 . - 1 ID=cds.g9330.t1;Parent=g9330.t1 NODE_2816_length_5067_cov_41.5821 . three_prime_UTR 3623 3915 . - . ID=g9330.t1.utr3p1;Parent=g9330.t1 #PROT g9330.t1 g9330 MLWQKPLAGYEKGHRQMQILALEHALDLYNKTLKGSNQFVFASIIKGFCALDQPERARRFMNHVYQRFNVHVDDNAFITFVTHCVERQKAQLALNAIESRKKDGVPMSERVHYAMASRISSPEMRDKLNQLMGRQPARQQGQQGQQGQQGQQYPPNIQNNPRQK* # ORIGINAL: g9329.t1 original gene structure, not modified by PASA NODE_2816_length_5067_cov_41.5821 AUGUSTUS gene 595 1878 . + . ID=g9329;Name=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS mRNA 595 1878 . + . ID=g9329.t1;Parent=g9329;Name=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS exon 595 632 . + . ID=g9329.t1.exon1;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS CDS 595 632 . + 0 ID=cds.g9329.t1;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS exon 749 1042 . + . ID=g9329.t1.exon2;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS CDS 749 1042 . + 1 ID=cds.g9329.t1;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS exon 1221 1677 . + . ID=g9329.t1.exon3;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS CDS 1221 1677 . + 1 ID=cds.g9329.t1;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS exon 1858 1878 . + . ID=g9329.t1.exon4;Parent=g9329.t1 NODE_2816_length_5067_cov_41.5821 AUGUSTUS CDS 1858 1878 . + 0 ID=cds.g9329.t1;Parent=g9329.t1 #PROT g9329.t1 g9329 MNARMRITLEQPIAAEAVVKQVSCHIEWFLSVCFVRRCNTSIAQVAGSHSIISSFPYKFTRAQTIFPRLLSLGIDTGGGSDIPLPALCPLNPNASVYAWQDAHTVTNDGNWGCGFCGKKFRNRPGLEKHFDSRHATATPTTRRELSCLADYCDILRCDPSPPEERIVRARSTEVADHRGEDDAMGRPEPFGREEGKETEKERETGSGRDVFLFLEDVCRRALMWVAEALLFDRRGTVRTWDDLVKQIGDCQELEMMEKRRQCEVEICMA* # PASA_UPDATE: g6839.t1, single gene model update, valid-1, status:[pasa:asmbl_3392,status:12], valid-1 NODE_2059_length_7881_cov_38.7075 . gene 2 684 . + . ID=g6839;Name=g6839.t1 NODE_2059_length_7881_cov_38.7075 . mRNA 2 684 . + . ID=g6839.t1;Parent=g6839;Name=g6839.t1 NODE_2059_length_7881_cov_38.7075 . five_prime_UTR 2 3 . + . ID=g6839.t1.utr5p1;Parent=g6839.t1 NODE_2059_length_7881_cov_38.7075 . exon 2 684 . + . ID=g6839.t1.exon1;Parent=g6839.t1 NODE_2059_length_7881_cov_38.7075 . CDS 4 552 . + 0 ID=cds.g6839.t1;Parent=g6839.t1;5_prime_partial=true NODE_2059_length_7881_cov_38.7075 . three_prime_UTR 553 684 . + . ID=g6839.t1.utr3p1;Parent=g6839.t1 #PROT g6839.t1 g6839 GCYAHAAGDARAFERSVDGSYVTWLAVNSLLMNGDYADEGFFYAVRPSHDTGTDPCGGRMLKFLPWDYDSILRTECHHRGVDEHVDPLLFCAECAYDRLIARDAVLRQRLRDALRTMVAGVLGVDSFKAVLADTYVQLRVHELAGVPLVDSAANIAVGARMAKQYSQRIARIAAALRAEGSN* # PASA_UPDATE: g6840.t1, single gene model update, valid-1, status:[pasa:asmbl_3393,status:12],[pasa:asmbl_3394,status:12],[pasa:asmbl_3395,status:12],[pasa:asmbl_3396,status:12], valid-1 NODE_2059_length_7881_cov_38.7075 . gene 881 6816 . - . ID=g6840;Name=g6840.t1 NODE_2059_length_7881_cov_38.7075 . mRNA 881 6816 . - . ID=g6840.t1;Parent=g6840;Name=g6840.t1 NODE_2059_length_7881_cov_38.7075 . five_prime_UTR 6337 6816 . - . ID=g6840.t1.utr5p1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 6136 6816 . - . ID=g6840.t1.exon1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 6136 6336 . - 0 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 5838 5975 . - . ID=g6840.t1.exon2;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 5838 5975 . - 0 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 5570 5690 . - . ID=g6840.t1.exon3;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 5570 5690 . - 0 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 5061 5418 . - . ID=g6840.t1.exon4;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 5061 5418 . - 2 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 4502 4878 . - . ID=g6840.t1.exon5;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 4502 4878 . - 1 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 4222 4307 . - . ID=g6840.t1.exon6;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 4222 4307 . - 2 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 3590 4064 . - . ID=g6840.t1.exon7;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 3590 4064 . - 0 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 3162 3452 . - . ID=g6840.t1.exon8;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 3162 3452 . - 2 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 2680 2907 . - . ID=g6840.t1.exon9;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 2680 2907 . - 2 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 2341 2447 . - . ID=g6840.t1.exon10;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 2341 2447 . - 2 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . exon 881 2108 . - . ID=g6840.t1.exon11;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . CDS 1395 2108 . - 0 ID=cds.g6840.t1;Parent=g6840.t1 NODE_2059_length_7881_cov_38.7075 . three_prime_UTR 881 1394 . - . ID=g6840.t1.utr3p1;Parent=g6840.t1 #PROT g6840.t1 g6840 MAGMEAVGKASSGVTPGQYVADPQQQYAQQQPQQITYKLVGDYMYSPETGRIGKGSFAVVYKGRHAKMPHVEVAIKRISKRNLNQKHMENLSQEISILKSMKHPNIVRLYDTQQTKDHIYLIMEYCSAGDLSRFIRKHKSLPEPIVKVFLQQIAAALQCLRSHTIIHRDLKPQNILLAPLGDKMVLKIADFGFARYLPWQGLAETLCGTPLYMAPEILESQQYDAKADLWSVGAIVYECLTGVPPFTAANHIDLLRVIKQSADNVKYPPTTSPELVSLLSSLLRREPSSRMSFEDFFRHPFLDFARYNSEVLAAQLAPTSTPQSQQQQPQQQHPQTQVPASPARSSVQPVAPQTPSATSVSGQNAAATPDDTVRMQRELSATPVVVMPRRHDAHGGIHGSPMARSPSPPPVTRCVTALGIEGGHPLRNPHDSDGPFGRPHSQPLFPRMELDAAQDDSDGPFSAPRRPNDLNSARDDSNTRPTALLPGDSTLGDNPMMGMGVGAGAGAGAGVGMGPAGPFALTSEGPFGAPVGTLGRSPSYLYLQSMNAGHPPTDNIVLTGSADGAMLTQNATVANAITSPSSSLQGSMNRRASLVSSSGGLPVPKTNPFRQVGQSPKASPPQSSGQPGLGMASSGGMQGVSAPSSVVPIGGASGPRLSGGSVDDAEYVIIDHNFVEINSFADVLNASPKGNRMTTPAVPSGTQQHAASSPPLSNFAGFVTSMNRGGFVTSLTGRTAEAVSPSTSPPFGVFAAPGMAGAASSSGLSAQYGTSPPFGRQFVGAGTVSMRSSRSMDENALVSEIETLARRTSLVMRLADALAPPAAGPFGEPTSTAASATHATRASDAIALYLKALSILHAGMRRIRGIIQQRQIVVSLSINGAVQWLRERFNECLERAEALKLVARQASSQSQSPSSVPYGAQGGAGNAFQGGAGAGASVDPCAAERIMYDHAMLECRDAAMREMHGNWEASEGHYSAALCLLETLLSEMANGPFKEADVAVVEAFIAAVSKRMRAMQQKRMSAGGSQRDRMT* # ORIGINAL: g2461.t1 original gene structure, not modified by PASA NODE_2949_length_4663_cov_42.8679_potentialcontaminant AUGUSTUS gene 3056 3910 . + . ID=g2461;Name=g2461.t1 NODE_2949_length_4663_cov_42.8679_potentialcontaminant AUGUSTUS mRNA 3056 3910 . + . ID=g2461.t1;Parent=g2461;Name=g2461.t1 NODE_2949_length_4663_cov_42.8679_potentialcontaminant AUGUSTUS exon 3056 3910 . + . ID=g2461.t1.exon1;Parent=g2461.t1 NODE_2949_length_4663_cov_42.8679_potentialcontaminant AUGUSTUS CDS 3056 3910 . + 0 ID=cds.g2461.t1;Parent=g2461.t1 #PROT g2461.t1 g2461 MDELFKDRLILFLKDLGNAVPEHPMIKRYVTSLQTNPVHLAKMIKHFVRCALEHEQALESIDCFEEENLKMEFLIGVDFAAVGRMPNITPTAQIAISQNLLLLLHVGKLHLSCDDELEKMEAAQKMRKALDGDAENEDNGEDAEGEDGAGMMGGSMFNNGVFNLIGKLVSEFSNPAVQQALSRNLEKTMDKNPVIKDIFEDLSTNANQFDGKIDVNNKMQLMKQAQKITTNLTHKMKSGQINMKSVMNGAQDMMSNMMEDETLKEMNIVGMLPRKLRRRMNRKA* # ORIGINAL: g2879.t1 original gene structure, not modified by PASA NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS gene 75 1510 . + . ID=g2879;Name=g2879.t1 NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS mRNA 75 1510 . + . ID=g2879.t1;Parent=g2879;Name=g2879.t1 NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS exon 75 781 . + . ID=g2879.t1.exon1;Parent=g2879.t1 NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS CDS 75 781 . + 1 ID=cds.g2879.t1;Parent=g2879.t1 NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS exon 1215 1510 . + . ID=g2879.t1.exon2;Parent=g2879.t1 NODE_4275_length_1894_cov_27.5646_potentialcontaminant AUGUSTUS CDS 1215 1510 . + 2 ID=cds.g2879.t1;Parent=g2879.t1 #PROT g2879.t1 g2879 ARKAVRLIQHAELLSRGYKAAHPMPPISRIEQQNACRCESAQSSAPGTMSPGAHPTDTAIHSHCAASTTGQHACIVCAYRRPSLLSLRSAMVSVMLRLSRHVVFDASAIDAATQQMGDTHRMRAVGTWASYSAAVRECHTVTDEGVGPISFEEGDVSIGRIHEIVRTLRKVVSAAIRFVAVICTDSIVLPSPMSPVLTSVSASLRSSVTALSAANGVLLRHVEFAAIDESSNTLKAAQKPFPESARKLVNIVALADGVAARARMCLDASLHDGEHVTRTNRTHVTFLALRPSCHVCLDTTSMQSIIAAVFACALGGMYVGRLCITSLLTSSCF* # ORIGINAL: g7510.t1 original gene structure, not modified by PASA NODE_3857_length_2615_cov_37.9063 AUGUSTUS gene 68 2543 . - . ID=g7510;Name=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS mRNA 68 2543 . - . ID=g7510.t1;Parent=g7510;Name=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS exon 2526 2543 . - . ID=g7510.t1.exon1;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS CDS 2526 2543 . - 0 ID=cds.g7510.t1;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS exon 2227 2387 . - . ID=g7510.t1.exon2;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS CDS 2227 2387 . - 0 ID=cds.g7510.t1;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS exon 1755 1920 . - . ID=g7510.t1.exon3;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS CDS 1755 1920 . - 1 ID=cds.g7510.t1;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS exon 68 1505 . - . ID=g7510.t1.exon4;Parent=g7510.t1 NODE_3857_length_2615_cov_37.9063 AUGUSTUS CDS 68 1505 . - 0 ID=cds.g7510.t1;Parent=g7510.t1 #PROT g7510.t1 g7510 MLHGQSSGKDISDKISAPIAAPSNPFSSDKLLQVTEAARRELTKKLEELQKLYDEEAVTRKGLEEEQVSMRSGVVEAKAIVAAQQVELSVRDSRIAELQAVLNAKDSEIRSLASQVTDTQQQLKSAEQSHTERIERETKRVTEISASAADASSRIVQLERDVAAARLDVEAEKKRCADALADAALAKGNVEALQAELETRLREHAKARTDIEQRLAARDREIAGFKAKAQEAQDALGLRARAAKSLEAEVDVACTQRDAAQASVQKLTEEVSALRRSAEAKGIETAQLEDRIKALQAQVEAKAASEVAENDRALGELRIALAEAQAKASSALATESAVRALDASVASLRDELTKEKGAAERLARESRREKEQMEGDLSSRTAEVSALKEECARLQSELVGKSDSGADLAEESDRLRREVAELKRTAADRQARHREEADEWQRRLCDVQEELFATMKEHVTLGQQVKSLLERCNVAEENSRDMSRRFTMAESLAVKRAEEIATLKQRAERAEEKVRERDEQLDKLTKTLKETQTQLAALAAAPPPPPPCGVVIVAADSSLAPDFKPPPPSMPPPPSVLSPQVLTSLLRKEGAPRR # ORIGINAL: g5770.t1 original gene structure, not modified by PASA NODE_1153_length_13492_cov_47.0999 AUGUSTUS gene 10406 11493 . + . ID=g5770;Name=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS mRNA 10406 11493 . + . ID=g5770.t1;Parent=g5770;Name=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 10406 10965 . + . ID=g5770.t1.exon1;Parent=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 10406 10965 . + 0 ID=cds.g5770.t1;Parent=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 11045 11207 . + . ID=g5770.t1.exon2;Parent=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 11045 11207 . + 1 ID=cds.g5770.t1;Parent=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 11320 11493 . + . ID=g5770.t1.exon3;Parent=g5770.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 11320 11493 . + 0 ID=cds.g5770.t1;Parent=g5770.t1 #PROT g5770.t1 g5770 MKSLNFTSDVKTLVDWVTNVVSTNGYDGDEAYEYVLREVPKLGWSPSCANRSLVLIGDSNPHPLKSNNPYNIDWRVEARNLASKNIRVYAMHALGYRWSLDFYRDLAQMTGGVYLELAQFSTVLDFILSICYRENSLEQLQQFENEVQRDGRMSRNLRALFDKLVGRAPGTVAAAPVDGMTPVDAGRFQSLMVDVDSPIKVFAERNGLVFRAGKGFYEFTKPEHISMEKEIVLQDRTTGDMFTGNAARAILGMTDTTSAAKKKITPGDYDTFRIYVQSTSYNRKLVAGTRFLYEVDTD* # PASA_UPDATE: g5768.t1, single gene model update, valid-1, status:[pasa:asmbl_579,status:3], valid-1 NODE_1153_length_13492_cov_47.0999 . gene 6845 8961 . - . ID=g5768;Name=g5768.t1 NODE_1153_length_13492_cov_47.0999 . mRNA 6845 8961 . - . ID=g5768.t1;Parent=g5768;Name=g5768.t1 NODE_1153_length_13492_cov_47.0999 . five_prime_UTR 8927 8961 . - . ID=g5768.t1.utr5p1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . exon 8850 8961 . - . ID=g5768.t1.exon1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . CDS 8850 8926 . - 0 ID=cds.g5768.t1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . exon 8482 8727 . - . ID=g5768.t1.exon2;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . CDS 8482 8727 . - 1 ID=cds.g5768.t1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . exon 8068 8200 . - . ID=g5768.t1.exon3;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . CDS 8068 8200 . - 1 ID=cds.g5768.t1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . exon 7640 7774 . - . ID=g5768.t1.exon4;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . CDS 7640 7774 . - 0 ID=cds.g5768.t1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . exon 6845 6935 . - . ID=g5768.t1.exon5;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . CDS 6879 6935 . - 0 ID=cds.g5768.t1;Parent=g5768.t1 NODE_1153_length_13492_cov_47.0999 . three_prime_UTR 6845 6878 . - . ID=g5768.t1.utr3p1;Parent=g5768.t1 #PROT g5768.t1 g5768 MLSLLHGPRALCLRPLQVHAWSAANGPLSPPHQRYAGGVATNVYVDAAQPMMPFEEYRRVKRRLTIQQRVAGVLSGVSGTLASQFAFVGMYPHYFDPNTPPDQIQPIMGLDPIVVGVIGCLGGGVVSFGLGAFLAGSLWRLFNRQTATALAVRDADFFDRIARNRAPFFRPGDDYYGEKIKTAAEYRAWLKLQKKKKDPTTDVTESPFDRPSTFQ* # ORIGINAL: g5769.t1 original gene structure, not modified by PASA NODE_1153_length_13492_cov_47.0999 AUGUSTUS gene 9543 10352 . + . ID=g5769;Name=g5769.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS mRNA 9543 10352 . + . ID=g5769.t1;Parent=g5769;Name=g5769.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 9543 9635 . + . ID=g5769.t1.exon1;Parent=g5769.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 9543 9635 . + 0 ID=cds.g5769.t1;Parent=g5769.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 9975 10352 . + . ID=g5769.t1.exon2;Parent=g5769.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 9975 10352 . + 0 ID=cds.g5769.t1;Parent=g5769.t1 #PROT g5769.t1 g5769 MASSWKNEQVLEWLVGLNSVFAKYAKTFEEEGVDGDMILALDDQILKDELHVTTALHRKKILKAIEDLKAAATSDAAPTAGEKRKAEESEPAASPAKKARLDVAAAPPAVVPAGDKPDSIEVVFSFDTTGSMYACLGQVKRNLKEQCSACSPRFRI* # ORIGINAL: g5767.t1 original gene structure, not modified by PASA NODE_1153_length_13492_cov_47.0999 AUGUSTUS gene 487 3876 . + . ID=g5767;Name=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS mRNA 487 3876 . + . ID=g5767.t1;Parent=g5767;Name=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 487 597 . + . ID=g5767.t1.exon1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 487 597 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 985 1455 . + . ID=g5767.t1.exon2;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 985 1455 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 1710 1907 . + . ID=g5767.t1.exon3;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 1710 1907 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 2215 2352 . + . ID=g5767.t1.exon4;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 2215 2352 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 2598 2837 . + . ID=g5767.t1.exon5;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 2598 2837 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 3166 3286 . + . ID=g5767.t1.exon6;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 3166 3286 . + 0 ID=cds.g5767.t1;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS exon 3536 3876 . + . ID=g5767.t1.exon7;Parent=g5767.t1 NODE_1153_length_13492_cov_47.0999 AUGUSTUS CDS 3536 3876 . + 2 ID=cds.g5767.t1;Parent=g5767.t1 #PROT g5767.t1 g5767 MATKTLHPSAPGTGMNTRGTSRTSQVTSSDVDFLDLPVRSLFESHVSSKDNCVPKNRFLRCLFATGLRDADPRVAVSMKRFAAAPSRMNLEEFKQCVGPNVDLITKALRGDFVIPDFPLFCNEIREAYEATLRNETGNVARFFRQVDPNLHGVSVCTVSGQRFDIGDTSIDFCIQSCSKPITYCLALEEHGADWVHKFVGREPSGCHFNDLVLNERGLPHNPMISAGTIMTCAMVKPDFNLADKFDYVMKQCRALAGGAKVGFNNSTCLAEKDSSDRIYSLGYYMREKNGFPPGTKLLDVLEFYFQCGSIEMTCEALSVVAATLANGGICPITDVRVFQPETVRDCLSLMYSCGMYHYSGEFAFKFGLPAKSGVTGAIMIVIPNVMGVCTWSPRLDSHGNSVRGIEFCDWLCTRFNFHNFGLTQSYNATSKRKEDEVRLMHTELMFATQAGDIANVRRLCVAGAEINTADYDGRTPLHIAASEGHVDVVKHLVKLGARLDPVDRWGGTPLDDAVRGNKQEVMRVLQEKMREASTSKRRS* # ORIGINAL: g13952.t1 original gene structure, not modified by PASA NODE_413_length_24302_cov_39.9446 AUGUSTUS gene 23088 24077 . + . ID=g13952;Name=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS mRNA 23088 24077 . + . ID=g13952.t1;Parent=g13952;Name=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 23088 23499 . + . ID=g13952.t1.exon1;Parent=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 23088 23499 . + 0 ID=cds.g13952.t1;Parent=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 23739 23827 . + . ID=g13952.t1.exon2;Parent=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 23739 23827 . + 2 ID=cds.g13952.t1;Parent=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 23946 24077 . + . ID=g13952.t1.exon3;Parent=g13952.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 23946 24077 . + 0 ID=cds.g13952.t1;Parent=g13952.t1 #PROT g13952.t1 g13952 MAAPRFARLVGAAARAVGSTAAIARLPPTHAARTPLAPLAPLAVHLARSYATDSVVDITRVRNIGISAHIDSGKTTLTERVLYYTGRIREIHEVRGKDGVGAKMDSMELEREKGITIKSAATYTNWKDCNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQSQTLTVDRQMKRYNVPCIAFVNKLDRCVCFPFLSPASPFSESV* # PASA_UPDATE: g13950.t1, single gene model update, valid-1, status:[pasa:asmbl_7013,status:3], valid-1 NODE_413_length_24302_cov_39.9446 . gene 14775 19145 . - . ID=g13950;Name=g13950.t1 NODE_413_length_24302_cov_39.9446 . mRNA 14775 19145 . - . ID=g13950.t1;Parent=g13950;Name=g13950.t1 NODE_413_length_24302_cov_39.9446 . five_prime_UTR 18961 19145 . - . ID=g13950.t1.utr5p1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . exon 16078 19145 . - . ID=g13950.t1.exon1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . CDS 16078 18960 . - 0 ID=cds.g13950.t1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . exon 15698 15855 . - . ID=g13950.t1.exon2;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . CDS 15698 15855 . - 0 ID=cds.g13950.t1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . exon 15387 15453 . - . ID=g13950.t1.exon3;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . CDS 15387 15453 . - 1 ID=cds.g13950.t1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . exon 14775 15109 . - . ID=g13950.t1.exon4;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . CDS 15086 15109 . - 0 ID=cds.g13950.t1;Parent=g13950.t1 NODE_413_length_24302_cov_39.9446 . three_prime_UTR 14775 15085 . - . ID=g13950.t1.utr3p1;Parent=g13950.t1 #PROT g13950.t1 g13950 MADKQEGFLCPMCMTSFSHPHELQAHWYKVHESDLSGDANGTSQQPAKEPERRDSKQSGKAMNGGKDDKKTKSNNASPSPVPASKVDVPEVATLTKQIADEKWLRSAVESQVRQLETTVSDLTSSLQEEKWFVAAHQEELAKVQAALKVAEAKAAADSQRIAEIESEKDAVFSALSAANVKIASVEQEALSIAEVVASEFARLKTSVDDTQRAGVAVAQDAVECRDLSGVSAEIDSETKRLQELFVANAKTVSLEKGALSTITDMLATHLAQMKATLEEDQRVRASLAERSTRAAVAAAESRAAVEIAALRRTLEGTAAAAESQSVTQASSHAQTEAALANAKGAIAALTANVTSLETQLAHMTSKHSASEVARQTSAASAAEALQEADASRARIAELSAELEHLRRDRDDTTARASAESATREELAAGLSSATSELCDLRARVASLEGQIASSNERIAAESASKGEVTKRLFLAINELNDFKGELDSVRESLEAEKTRADCAERDKEGVAASLNQASVAAESTCRSLSAEIESLKSERDDLLQKLDSLRTSSSEAEAAAMDAANRYALAAVSADEALRALTADVDRLRSEVESASALVAIEKARADDATAEIQSQSASLTLANKKTEDALSRCSALQAELIEWENRPPPVCAMCPNYEVQLVRMQAESAEQLQLVRRALADKELEHDAASARLADVEVALSDAASNSALLSTKLADSENSASEWRKTAESLARELEATVARTEGDASALRSRVEELEAAVAEKEKEKDASLAMNAVRISELLSQIETATAATFASEKAAKSVRQQLLDAESASEELRRRLGEGDSNLVRVRRELQAKTDQSASEMAEMRAKIVASDKEHVAVVAGLSAQLASLQTSLEEAGRRAASSEKELEKERKTRADEVGALHATVDALRESLREAEVARQGEIASLRGDFDMRLSDERRVLQGEIESLQGDLAQTQLGLSEANKEKASLGEANAAMEGRLEDALTVQKELCFQLQQLQVKDFDVRTRKWESDETVPACRACGDPFSITNRKHHCRSCG* # PASA_UPDATE: g13948.t1, single gene model update, valid-1, status:[pasa:asmbl_7012,status:12],[pasa:asmbl_7016,status:12], valid-1 NODE_413_length_24302_cov_39.9446 . gene 2871 9014 . - . ID=g13948;Name=g13948.t1 NODE_413_length_24302_cov_39.9446 . mRNA 2871 9014 . - . ID=g13948.t1;Parent=g13948;Name=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 7859 9014 . - . ID=g13948.t1.exon1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 7859 9014 . - 0 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 6353 7508 . - . ID=g13948.t1.exon2;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 6353 7508 . - 2 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 5579 5946 . - . ID=g13948.t1.exon3;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 5579 5946 . - 1 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 5095 5302 . - . ID=g13948.t1.exon4;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 5095 5302 . - 2 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 3823 4954 . - . ID=g13948.t1.exon5;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 3823 4954 . - 1 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . exon 2871 3471 . - . ID=g13948.t1.exon6;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . CDS 3073 3471 . - 0 ID=cds.g13948.t1;Parent=g13948.t1 NODE_413_length_24302_cov_39.9446 . three_prime_UTR 2871 3072 . - . ID=g13948.t1.utr3p1;Parent=g13948.t1 #PROT g13948.t1 g13948 MLVKEYRICLPLTVEEYRIAQLYMIAKKSKEESHGRGSGVEILVNEPYTNGPGGSGQYTKKIFHVGSHLPQWLKAVMPKTALMVEEEAWNAYPYTRTKYTCPFIEKFFIDIETRYFPDRGTQENVFGLKGSELKERGVDRIDLVIDKVSDKDYKAEEDPTLYKSQKTGRGPLDEEWVRTSNPIMCAYKLCKVEFRYWGLQSKIERFIHQVGLRGVMVKAHRQVWCWQDEWYGMTIDDIRRMERETQEALAAVMQHAEAEEGDDESAEEADDASGSSARTRVPAIEACPSSAASPSSSSSGHAGGNAAAVDTTATHNFTPPPLTPSGSFKKLPLATKKSLDILQRHSDADLIDTSAYHRSNTRLSMNTDDDDDLSDSSADEFFDAEASSNLKHTSAGKSHAFGRGSVAQDMSLESLPMLQRTVQIEHTGDGVAQIRPSILPGASDAEPETPLLALVVRGNNILEGDSDALFDPETFLRTLCDLAGTHFQQLASVLNVRSIHCGDVSRDALRTLRAIDPDRYTQDTVHASTLAMFAFASSEYRRRLDEVVDRLNAAYRSFVDKSDLTPVAAKGKKETPTLKEKEKENRRMSGLSAFKLRPPSFVFGLTSSSTSPNDKEKSPHLPQQHSATPPMTPPGATAQVSPARGNSGNTSANASTNASSSNNNNDDASCVPKVTLIGDCVGAMMIFDALTQRPSRLEFEVDDFFAVGSPIGLMLAARRRFDSGAARDAHAHPPKCKQVYNVFVASDPMAYRLEPLLDVRFERIPPTVVPRYQEYPLGLGPIPTVAESIDRYKGQIDESDPASEGASRLRSRTTSMDRMDAKASASSASEHDKLAHTLREFAGGSVPESADELKVTSCNEGYELVGKARLVGVFATAAGKAPTGLVAVKLASGGWSSPAACTIIGLDDALCKSGKGIVVLGLSDRLCELYRTTGALSLASNDGRGVSVYVGRTRETFAPIPMSHATMADSSSANKVLYGKDNKLRDILSSSDPAEHAKDLQAFVRTLVEAEYPVTPNTGSSVSSQSFFDDSFASGGGGGGVRGWWGTHRVDHEINGPVGLSTLPETALVHIIHGSYFESKDFAGFVLRQMMRSVSPHWDSPALAPGSSSTAFLSSATGADPHPFVVSEPRDKWRRTRTRLKIKGRYPNHRGRDVVVCVGMPVTVTCKFMYGPFDLAGLTGEDIDFFVMTSPPSGEWVKVGTVQTDSNATAAVTVPDSLKLGLGQYPVTMVVRGDHTIGSCHVFVVHPGTEAIVFSIDGSFAASTSLSGADPKVQAGAVDVVRMWSDKGYLIVYVSSRPDIQQHAVMSWMAKHNFPQGVVMLADAISHEPAKAKARQLKQLVAEGRLSLYAGYGSGKDVAVYHSLGIPEDRIFAVGKTGKANCVVLLDGYSEHLSSLAHIPPAEISASVADSSAAGGASSASGSGSGFIRRNTLKTARVGRHPLQTQVSVDSADLGASASSPTGVIKRTFTRS* # PASA_UPDATE: g13951.t1, single gene model update, valid-1, status:[pasa:asmbl_7014,status:12],[pasa:asmbl_7015,status:12], valid-1 NODE_413_length_24302_cov_39.9446 . gene 19506 22647 . - . ID=g13951;Name=g13951.t1 NODE_413_length_24302_cov_39.9446 . mRNA 19506 22647 . - . ID=g13951.t1;Parent=g13951;Name=g13951.t1 NODE_413_length_24302_cov_39.9446 . five_prime_UTR 22622 22647 . - . ID=g13951.t1.utr5p1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 22241 22647 . - . ID=g13951.t1.exon1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 22241 22621 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 22039 22095 . - . ID=g13951.t1.exon2;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 22039 22095 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 21866 21946 . - . ID=g13951.t1.exon3;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 21866 21946 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 21675 21767 . - . ID=g13951.t1.exon4;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 21675 21767 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 21354 21507 . - . ID=g13951.t1.exon5;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 21354 21507 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 21131 21213 . - . ID=g13951.t1.exon6;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 21131 21213 . - 2 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 20791 20969 . - . ID=g13951.t1.exon7;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 20791 20969 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 20447 20573 . - . ID=g13951.t1.exon8;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 20447 20573 . - 1 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 20054 20179 . - . ID=g13951.t1.exon9;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 20054 20179 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . exon 19506 19763 . - . ID=g13951.t1.exon10;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . CDS 19716 19763 . - 0 ID=cds.g13951.t1;Parent=g13951.t1 NODE_413_length_24302_cov_39.9446 . three_prime_UTR 19506 19715 . - . ID=g13951.t1.utr3p1;Parent=g13951.t1 #PROT g13951.t1 g13951 MAERSQKKKSRQAGDAPGGKATGKRAGVVVDEDGIEYAPADQLEAEARDAFNGTSDRKAKTSKINVEDDGYGDDDGVDDAPKRKPKAKTDSTDAPGVQKRLAINPSDIKCKAKREALWQQMKRDKDKDKRDRRTKRKQEEEALGDQAPPKKKPRTIENSRESDETVVAPDDEEVMNDEATDELASYFNGVAPKILITTSRKPVGSTYKFIEELLAVIPDTHFYRRKVYDLKEIVKYATAEGFTDVMVINEDKKEPNGLILCHLPEGPTAHFKISSIKHCKDIRNHGRVTSHKPELILNNFNTRLGHTVGRMFAALLPHQPDFIGRRVVTFHNQRDFIFFRHHRYIFKNEKRAGLQEIGPRFTLKLRSLQQGTFDTKFGEFEWVHKKAAKLFANKFSCGSSVTNPDEITIQGDVSDTLDEFIMAQWPEITDDDIDFIEPKKKD* # ORIGINAL: g13949.t1 original gene structure, not modified by PASA NODE_413_length_24302_cov_39.9446 AUGUSTUS gene 11549 14152 . + . ID=g13949;Name=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS mRNA 11549 14152 . + . ID=g13949.t1;Parent=g13949;Name=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 11549 11870 . + . ID=g13949.t1.exon1;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 11549 11870 . + 0 ID=cds.g13949.t1;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 11969 13131 . + . ID=g13949.t1.exon2;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 11969 13131 . + 2 ID=cds.g13949.t1;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 13388 13747 . + . ID=g13949.t1.exon3;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 13388 13747 . + 0 ID=cds.g13949.t1;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 13913 14152 . + . ID=g13949.t1.exon4;Parent=g13949.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 13913 14152 . + 0 ID=cds.g13949.t1;Parent=g13949.t1 #PROT g13949.t1 g13949 MADVPSYDGALNSRSVRGFSTWKVRDFVLQGSILKCADSKDAAYAFALPLSDSEITFAERKQQIRIRFPVKMFGDSFLFRAPNAAEFNVWKSLLLKGQRCMDGQKVPEHMGSATAFEQVHGKAPVPVVAPTDTGDGEIESSDLDSLASDDTRPKALKTMTSEIKDFLKKRATFVLSMATLENELRMRVGSVSTGLDRAVGSVKVESPSADMINRAKTAGEAMLKSFMALSSKDAYLGHRFTLERERVATLEEAVQEMVPEGGEEDETDDEPQAGTSTSTKRVLESDIVVHGVPVPATTAPRDPATGRRTQLPAWRSKKRVSIWKFVKDAIGKDFSKITMPVILNEPLSALQRFSEDLEYCELLDQAAAASNPLLRLAYVTAFGISMYASTQSRTGKPFNPLLGETFELLRPERGFRMIAEQVSHHPPVSALHADGKGWSWWKDVFVKNRFKGKDMDVFPVGISHAMLTAHGEHYSWEKVVTCVHNMVIGRVWLSNYGDREVVNHKTKDKCVLSFRKVGLFSSNDSIGLVDAKVMDAKGKIHYVLSGNWMTHLDLQEVNGKGEAVGEKRLLWKAHPAIPLADEQYNFTKFSVELNELDQDSMLKACPTDCRFRPDQRWQENGDMDKAQDEKTRLEEKQRLTRKQRESIPSSDWSPMWFEKVTDKDMKEELWQYKGGYWEHREKSDWAGCSDLYSV* # ORIGINAL: g13947.t1 original gene structure, not modified by PASA NODE_413_length_24302_cov_39.9446 AUGUSTUS gene 516 2699 . + . ID=g13947;Name=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS mRNA 516 2699 . + . ID=g13947.t1;Parent=g13947;Name=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 516 683 . + . ID=g13947.t1.exon1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 516 683 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 895 1023 . + . ID=g13947.t1.exon2;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 895 1023 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 1133 1282 . + . ID=g13947.t1.exon3;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 1133 1282 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 1466 1597 . + . ID=g13947.t1.exon4;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 1466 1597 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 1805 1873 . + . ID=g13947.t1.exon5;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 1805 1873 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 2263 2382 . + . ID=g13947.t1.exon6;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 2263 2382 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS exon 2526 2699 . + . ID=g13947.t1.exon7;Parent=g13947.t1 NODE_413_length_24302_cov_39.9446 AUGUSTUS CDS 2526 2699 . + 0 ID=cds.g13947.t1;Parent=g13947.t1 #PROT g13947.t1 g13947 MQVVLNERRLQAENAELTAQLAKFHASFPGGEPQQVFDAMSDTIAQLRKHIDSKKQEEDALMQEMDVIGKAFQEIEAQNTRLTTALKEKEEANFNLITERIRSSTINAMLREEKELIELKIGALKAENDALVDAMKKLEEREAKLKEYVAAYEKDYGVKDAIASTLRRELADAISELNLHKGTNDTHIKEIAEIKTQLDSRTEQVQTETHARKRLAEELITLKKRLEKRTGAVATGDGKTGDGALQKSEEMLNYYRQLMMCKACKNARIDTVITRCFHTFCESCVTSRIETRQRKCPNCGESFGKGDYHCLYL* # PASA_UPDATE: g4720.t1, single gene model update, valid-1, status:[pasa:asmbl_5085,status:12],[pasa:asmbl_5086,status:12], valid-1 NODE_2828_length_5045_cov_35.2632 . gene 244 4951 . - . ID=g4720;Name=g4720.t1 NODE_2828_length_5045_cov_35.2632 . mRNA 244 4951 . - . ID=g4720.t1;Parent=g4720;Name=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 3611 4951 . - . ID=g4720.t1.exon1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 3611 4951 . - 0 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 3325 3384 . - . ID=g4720.t1.exon2;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 3325 3384 . - 0 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 2697 3209 . - . ID=g4720.t1.exon3;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 2697 3209 . - 0 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 2293 2481 . - . ID=g4720.t1.exon4;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 2293 2481 . - 0 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 2034 2139 . - . ID=g4720.t1.exon5;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 2034 2139 . - 0 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 1602 1758 . - . ID=g4720.t1.exon6;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 1602 1758 . - 2 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 982 1262 . - . ID=g4720.t1.exon7;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 982 1262 . - 1 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 646 760 . - . ID=g4720.t1.exon8;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 646 760 . - 2 ID=cds.g4720.t1;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . exon 244 412 . - . ID=g4720.t1.exon9;Parent=g4720.t1 NODE_2828_length_5045_cov_35.2632 . CDS 244 412 . - 1 ID=cds.g4720.t1;Parent=g4720.t1;3_prime_partial=true #PROT g4720.t1 g4720 MLYFFDTREAPNSSMRVPLSRAEFSKEDITAWGGIQDLCFHITAPGGIDLHLKAPTAAEREKWCAAITTIIESSPAIVAAVAAAAASSHTTPSGHRQSIVVGGTAASPVALAPNSNILTRGVLRAGFLELETLVGLIRRHKKYYFRLKVGMDYKASLEYAEDAAGGSHVIGSIPLASSSWVSQRDNADNALEIVTPGRLWVVTSPSRAGTVEWLFSIRDAIDRMHSLDGETSNGDVRLATRGDIVQMQGQAILGFPKWEHRWLKAEGSVIRVHAWTPDNGPGDMLEDIHLEKVLCAKRAAGTSANDGTFEFQINTASKVFFVRATTSDKASRWISELEHLRIRTRDDALERVRRKSEFTPTGGRSPSMDDLQIVQGEGAVKTVGNALDFGRHALDGFVERLGRNARFTMYWMSLVGSDIFYFKNEKSTEPDRRLPIEKVLAAKESTQIKGRGFVIVTADEEVEHRVQTEEERDRWLGVIQCVRILSMDIIETLGVPSTDEDEKVKLSAADVREFADLKAGKVRLLMRCASKRTGHSELVEPSVASLDTNLAYVLDVGNKVYHWNGAKSSRMTRAKAWDVSTRIQKRERNGGPQLIVIDEGVKDAEFIKLLAGGEGGSVKVANSFDIEAFEPSPVTLYKVSYHAKFSKMLSLVSEGAKPNKAVLKSGFSYVVDAGGEIYVWIGKESHKQAKAVALTVAKTLQVQEHRPPWTFALRVYENSEPIIFQEKFVGYQGLIQGAGLMAEAKGNIAAAVAQQEIDIAALLSSTHSVKQDDILRTKDVAVAGKAEIWRVNDFELVHHPEGLRGFFFSGDSFVIQYVYRAQGADQSVIYYWQGRDSSITEKGASALWTIELDEKKLGGEATQIRVVQTKEPSHFVQLWGGTAVVFKGNCGRHDPNRIVMFDLRDAADDGCGITGKGGEPGLKCAGVLAVEVELGAFHLHSWHCTVIAGVTSVFAWQGRLSSESERAAASDLAERLS # PASA_UPDATE: g9693.t1, single gene model update, valid-1, status:[pasa:asmbl_2272,status:12], valid-1 NODE_1663_length_9919_cov_42.8679 . gene 6079 9862 . - . ID=g9693;Name=g9693.t1 NODE_1663_length_9919_cov_42.8679 . mRNA 6079 9862 . - . ID=g9693.t1;Parent=g9693;Name=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 9776 9862 . - . ID=g9693.t1.exon1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 9776 9862 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 9516 9580 . - . ID=g9693.t1.exon2;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 9516 9580 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 9204 9316 . - . ID=g9693.t1.exon3;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 9204 9316 . - 1 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 8454 8635 . - . ID=g9693.t1.exon4;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 8454 8635 . - 2 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 8110 8201 . - . ID=g9693.t1.exon5;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 8110 8201 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 7880 7943 . - . ID=g9693.t1.exon6;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 7880 7943 . - 1 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 7493 7570 . - . ID=g9693.t1.exon7;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 7493 7570 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 6878 7267 . - . ID=g9693.t1.exon8;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 6878 7267 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . exon 6079 6677 . - . ID=g9693.t1.exon9;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . CDS 6636 6677 . - 0 ID=cds.g9693.t1;Parent=g9693.t1 NODE_1663_length_9919_cov_42.8679 . three_prime_UTR 6079 6635 . - . ID=g9693.t1.utr3p1;Parent=g9693.t1 #PROT g9693.t1 g9693 MCEALWTKCQYGAYHIGQVLLFIAFNGERLFKDCHLTQRLIDASDSEPRDANDKFRKRSGYMGHAVVLANAIVGIAGNDAVNGQSYFAEVEPILADSAWTEFVAGQLAETNAVNNKIIGGIKPAQTAESSDDEDIFSATGTENESAAELAFARYMTQHMSNDFPDDFGFDDEDEHEDDDSRNFGRDQDFDARGAYGTDIRNELRQHLSAFESGHEDGITDSTLGQGQWRERTIADHSVSRPYGSSGSAAGSFAMQFNSARQEANSPSKSALNDPFGTNSAAMEDSDDTSDSSDDDARFAPKQATPATAALDSESAPALAPSEAWTPDFGDFKSGVTATSEQTHEDWATFGDNSMSLHNAPSPMDTTESDA* # PASA_UPDATE: g9691.t1, single gene model update, valid-1, status:[pasa:asmbl_2270,status:12], valid-1 NODE_1663_length_9919_cov_42.8679 . gene 643 2401 . + . ID=g9691;Name=g9691.t1 NODE_1663_length_9919_cov_42.8679 . mRNA 643 2401 . + . ID=g9691.t1;Parent=g9691;Name=g9691.t1 NODE_1663_length_9919_cov_42.8679 . exon 643 864 . + . ID=g9691.t1.exon1;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . CDS 643 864 . + 0 ID=cds.g9691.t1;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . exon 1298 1436 . + . ID=g9691.t1.exon2;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . CDS 1298 1436 . + 0 ID=cds.g9691.t1;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . exon 1649 2088 . + . ID=g9691.t1.exon3;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . CDS 1649 2088 . + 2 ID=cds.g9691.t1;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . exon 2237 2401 . + . ID=g9691.t1.exon4;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . CDS 2237 2365 . + 0 ID=cds.g9691.t1;Parent=g9691.t1 NODE_1663_length_9919_cov_42.8679 . three_prime_UTR 2366 2401 . + . ID=g9691.t1.utr3p1;Parent=g9691.t1 #PROT g9691.t1 g9691 MTVDGRTFQLCSFENTVAFLTARHIRATKGWRGLYRGVSARIAEGFVYTIVRNFVKRAIHKAFGWDVASNAAPWVPSTFRRFAPSDSPQATGKTLLGCFSELSVEIVSGCVAQFVAHPLHVVSCLMAAQYIGEENTYVGIAQSIRLIVRREGVQAGLFAGVVPALLGEAVETTVITCLRLISEYIFDEDSGESDSDSDDDDNDEEEEEEEEELASNRAAISQDKALVVQIGQLLLSPLFYPFWLVKTRMIIAGSGLAASLPPFMPSQGYSSWKACLSDAYTCGGWSSVGLLRGSAMFGRTLPASSLKIN* # PASA_UPDATE: g9692.t1, single gene model update, valid-1, status:[pasa:asmbl_2271,status:3], valid-1 NODE_1663_length_9919_cov_42.8679 . gene 2716 4876 . - . ID=g9692;Name=g9692.t1 NODE_1663_length_9919_cov_42.8679 . mRNA 2716 4876 . - . ID=g9692.t1;Parent=g9692;Name=g9692.t1 NODE_1663_length_9919_cov_42.8679 . five_prime_UTR 4742 4876 . - . ID=g9692.t1.utr5p1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . exon 4439 4876 . - . ID=g9692.t1.exon1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . CDS 4439 4741 . - 0 ID=cds.g9692.t1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . exon 4099 4317 . - . ID=g9692.t1.exon2;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . CDS 4099 4317 . - 0 ID=cds.g9692.t1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . exon 3816 3981 . - . ID=g9692.t1.exon3;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . CDS 3816 3981 . - 0 ID=cds.g9692.t1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . exon 3572 3705 . - . ID=g9692.t1.exon4;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . CDS 3572 3705 . - 2 ID=cds.g9692.t1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . exon 2716 3445 . - . ID=g9692.t1.exon5;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . CDS 3215 3445 . - 0 ID=cds.g9692.t1;Parent=g9692.t1 NODE_1663_length_9919_cov_42.8679 . three_prime_UTR 2716 3214 . - . ID=g9692.t1.utr3p1;Parent=g9692.t1 #PROT g9692.t1 g9692 MECVKTTVLRCEESLELLDDDLRDHSNRESEPGSPEMPRMKCAPAPVTTLMGQPGDETEILLDGLLDMQGQLRPNANYLEHVQGPLIKEWHRRDTLDWLYDIADAHRLMPQTYALSINYFDRFLSVCKVRIEQLQLIAAVCMSLAVKFRETDKYMRAEDLAASSDGAFKAEFLLKLEPYVLRRLEHRLYAVTPFDFLDLFLTNFRVLIGDCDLSSITSMASSLIELALIHYDFISYDSGTVAAAALLLAIQTVQGKRSQRLGKEEMKAYLRGDTEFLLCMERIQKVMCSNYQQRTAAGYDSPPLSTPTNIISGSQIFNSDGVLDPDGNVCQEGNQRHLSVSPSSTAFPYF* # PASA_UPDATE: g6972.t1, single gene model update, valid-1, status:[pasa:asmbl_2791,status:12], valid-1 NODE_1846_length_8942_cov_45.5681 . gene 4510 8849 . + . ID=g6972;Name=g6972.t1 NODE_1846_length_8942_cov_45.5681 . mRNA 4510 8849 . + . ID=g6972.t1;Parent=g6972;Name=g6972.t1 NODE_1846_length_8942_cov_45.5681 . five_prime_UTR 4510 4816 . + . ID=g6972.t1.utr5p1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 4510 5017 . + . ID=g6972.t1.exon1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 4817 5017 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 5559 5655 . + . ID=g6972.t1.exon2;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 5559 5655 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 5825 5913 . + . ID=g6972.t1.exon3;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 5825 5913 . + 2 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 6307 6438 . + . ID=g6972.t1.exon4;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 6307 6438 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 6655 6843 . + . ID=g6972.t1.exon5;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 6655 6843 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 7170 7345 . + . ID=g6972.t1.exon6;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 7170 7345 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 7772 7850 . + . ID=g6972.t1.exon7;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 7772 7850 . + 1 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 8194 8319 . + . ID=g6972.t1.exon8;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 8194 8319 . + 0 ID=cds.g6972.t1;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . exon 8729 8849 . + . ID=g6972.t1.exon9;Parent=g6972.t1 NODE_1846_length_8942_cov_45.5681 . CDS 8729 8849 . + 0 ID=cds.g6972.t1;Parent=g6972.t1;3_prime_partial=true #PROT g6972.t1 g6972 MSEDRSKDFKPKITGDEARRRRQEAATGLRKTKRDESIAKRRRAGEEDDDEIASESEERRTVQLRELAEAMPAVSASLRSEDIQAQLNGARFCRQILSKKNPPTDIVVQAGLVPLLVSCLRKDDYPTIQIEAAWSITNIASGDTECVSEVVRCNAVPELVRLVSNQQKDVREQAVWALGNIAAEGPEFRDFVIGCGTVPALIRAFRESTDLTLTRTAVWALSNLCRGKRPHPDFSKLRESLPILANMIYTADLTILQDACWALSYLGDGPAEQATEQIDAVVSAGVSKRLVELLMYPDAGVTIPALRAVGNILSGNEQQTQVILNCGALPPLVALLNHPRDTIKKEAAWAMSNIAAGETHQIEVLMQSGAVPLLVNIMMQSSVRAASEAMFTVLNLLTGGTPE # PASA_UPDATE: g6971.t1, single gene model update, valid-1, status:[pasa:asmbl_2790,status:12], valid-1 NODE_1846_length_8942_cov_45.5681 . gene 2024 3960 . + . ID=g6971;Name=g6971.t1 NODE_1846_length_8942_cov_45.5681 . mRNA 2024 3960 . + . ID=g6971.t1;Parent=g6971;Name=g6971.t1 NODE_1846_length_8942_cov_45.5681 . exon 2024 3960 . + . ID=g6971.t1.exon1;Parent=g6971.t1 NODE_1846_length_8942_cov_45.5681 . CDS 2024 3889 . + 0 ID=cds.g6971.t1;Parent=g6971.t1 NODE_1846_length_8942_cov_45.5681 . three_prime_UTR 3890 3960 . + . ID=g6971.t1.utr3p1;Parent=g6971.t1 #PROT g6971.t1 g6971 MAADGQIGGGPGSSKRRRRVILGAVLAMSILVAVQFVFIGVTIDTTWNTQMVDEWDNWISGLCEQADAADGWDGWISGLCKTAEQESNLRLSRASNNAPALPPRGPTAHMPRARVAVIEYCSNPPACVAAGPQTDARATTFLGLEKYESRLVRPGERLDFRIIARDANGTERHCGGDSFQVQISGPSIYHGHPIDHLNGTYSFSAILFDEGRYTVRARLDFRACTGSVLCNPNSTIVSNMMMEYIGQVGSLRVVAEKLSHSSNGSIDGMLVRSTAAAIALENVKKHTCGIRYSTSMISTDDASLRVGRWVNRTTLCHRHSPLQLTDNRRCRSPFFRGWYVWVPVDAARPILPAGMCRDVWIHFIGDSLARHNFIRLNSIMDTAIGLPTHRVCFALRYKARRPADRVRKMVGCNEVENEGAYSRWMRYAYYESHNITLSFVWLTPGRKPLPFPTFREWLYLPMVDNPEADPELMHPFPSDDSLLPTHVFMNNGLHHVSLTSPTDPRWMTSYYRYITAILERAKLDFPAPRTSHYWISTAQTQFTEQVLPAFHRCATNDRVYAYGDIASAAVVAQNVTSVWDFLQFSLGRGDATDDNRHYNENVQAAVVDEMLNMVCACGKRN* # PASA_UPDATE: g12701.t1, single gene model update, valid-1, status:[pasa:asmbl_4152,status:12], valid-1 NODE_2369_length_6530_cov_40.765 . gene 1 939 . - . ID=g12701;Name=g12701.t1 NODE_2369_length_6530_cov_40.765 . mRNA 1 939 . - . ID=g12701.t1;Parent=g12701;Name=g12701.t1 NODE_2369_length_6530_cov_40.765 . exon 1 939 . - . ID=g12701.t1.exon1;Parent=g12701.t1 NODE_2369_length_6530_cov_40.765 . CDS 1 939 . - 0 ID=cds.g12701.t1;Parent=g12701.t1;3_prime_partial=true #PROT g12701.t1 g12701 MRRGRRARRALVVAGVSWVLLLISLSWIRTLTSPESTKTNAIARDSEDKYYRERAIALNATWHAETDDDVRRAIDFNNAAILNDGKELYRRFVAAFEHTWDLAMLVRWTSSHTRSVRTNITFSVGPFKGHPDQNGGGVGGAGWMSQTRSANVSLWGKGSLSLRNSRRRTFLVTLDSPIVIDERVGAVGGGHADAGERIVRRFMLLSLWEDTNRLKYRTSASLLAAVGIWPMHTAFVEVRIPGVPSADGAPGDSQGVYLLVEFPLDAVARVEGVGVDEIEMASRAVLDPGSAMRNRSLTGKEEPDLPLRHFPSF # ORIGINAL: g12702.t1 original gene structure, not modified by PASA NODE_2369_length_6530_cov_40.765 AUGUSTUS gene 2165 5056 . - . ID=g12702;Name=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS mRNA 2165 5056 . - . ID=g12702.t1;Parent=g12702;Name=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS exon 4997 5056 . - . ID=g12702.t1.exon1;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS CDS 4997 5056 . - 0 ID=cds.g12702.t1;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS exon 4606 4746 . - . ID=g12702.t1.exon2;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS CDS 4606 4746 . - 0 ID=cds.g12702.t1;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS exon 4136 4422 . - . ID=g12702.t1.exon3;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS CDS 4136 4422 . - 0 ID=cds.g12702.t1;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS exon 2930 3889 . - . ID=g12702.t1.exon4;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS CDS 2930 3889 . - 1 ID=cds.g12702.t1;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS exon 2165 2747 . - . ID=g12702.t1.exon5;Parent=g12702.t1 NODE_2369_length_6530_cov_40.765 AUGUSTUS CDS 2165 2747 . - 1 ID=cds.g12702.t1;Parent=g12702.t1 #PROT g12702.t1 g12702 MNRYKVTKQLGDGTYGSVLQGRNRETGEIVAIKKMKRKFYSWEECISLREVKSLKKMNHANVIRLKEVIRENDELFFVFEFMEANLYQMMKDRTTLLPEASVRNIIYQVLQGMAYMHKHGFFHRDMKPENLLCTKDIVKIADFGLAREIRSRPPFTDYVSTRWYRAPEILLRSTNYNSPIDIWAIGAIMAELYTLRPLFPGASEVDEIYKIVSVLGTPTKENWPEGLRLAAAMNFKFPQASPTNLRNIVTNASPDALQLMQDMLHYDPAKRPTASQALQHPYFSVGLTVPRVLAEAYAAQAAGKEVHSNQIAMDATGTSSSTKVDARGKAGAGRSSESSPEPNVAPNKKPRRSGGDDLDFDADEIEREREREREKEREKERLREREKEREKEREKEREKEREREREKEREKEREREREREREKEKEKGRGAKQGLSLRYDSDLESMLQELDDGDARAAAAPKAGRRSRNNNALDDLLGDSEWNLAKKDTSKSTYFGGEPKVTKQASPQLQRRSREQKDQTSPRTSFGVSGTSVFKSDLPSSYSKASDKDDDILSPSARYLQQARYYPAVNPLPSIGGGGGAAVTSVYAGDKNFSSGSSYGRSQATLGGGSTTIGAYTSGNPLPPPVAPVRGGGFYANWKAGTQQPPAYVASATSKPAMPVAAPTRFGSSAFDWTAK* # ORIGINAL: g2269.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 3668 4485 . + . ID=g2269;Name=g2269.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 3668 4485 . + . ID=g2269.t1;Parent=g2269;Name=g2269.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 3668 4184 . + . ID=g2269.t1.exon1;Parent=g2269.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 3668 4184 . + 0 ID=cds.g2269.t1;Parent=g2269.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 4274 4485 . + . ID=g2269.t1.exon2;Parent=g2269.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 4274 4485 . + 2 ID=cds.g2269.t1;Parent=g2269.t1 #PROT g2269.t1 g2269 MVAKQLIEKGFMLPTNAELFHPAGTYKEGDALYVKMEEGVYHVGDIVKLGRIRAADITATPNDEEGRIVVGSHDDQGNRTRYVVDMDGEGKIGCCSLMGFVYAARPDVHVLRLEDVDRGEKAAEIAVDFLANRTNVNTMIEKLRNRPSRETIFPQGREYNEFLWNCETFVTFCFSKFVFKNNKACQDDNGTSREDDNVACRENGSCCEYGSCCEYGTCRENDTCENDTCCEFGSPRENGSSL* # ORIGINAL: g2270.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 6461 8083 . + . ID=g2270;Name=g2270.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 6461 8083 . + . ID=g2270.t1;Parent=g2270;Name=g2270.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 6461 8083 . + . ID=g2270.t1.exon1;Parent=g2270.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 6461 8083 . + 0 ID=cds.g2270.t1;Parent=g2270.t1 #PROT g2270.t1 g2270 MSTSIQTLPVEVLHVHIVPYLLMADICALAHTSPKLRKVLQNVAVFPIYKRHAVRYHQDVAARQLLHSGNMQFSLEDTSKVYAHNNACVSAFANLHVVYLSHWTALTDVSALGRVHTLNLSHCEGITDVAALGRVHTLDLSHCKGITDVSALGGVHTLNLGSCDGITDVSALGSVHALNLERCERITDVSALGGVRTLSLAHCYNITDVSALAGVHTLDLSECKCITDVSVFSNVHTLFLASCDSITDVSALAGVHTLTLASCNSITDVSALADVYELSLSNCRGITDVSALDSVHTLDLSKCTSIWDVSMLGNVHTLNLSFCGCITDICELGNVHTLIMHACMWIIDVFYLSGLHTLDLSHCEHVTEISELGGVHTLSLSHCFGIKDVSALGGVHALNLSFCDRIRDVSALGGVHTLNLLGCDLIKDVSMLGGVHTLDLSGCCNITDVSALGGVHTLSLLACVLIADVSALGGVHTLNLSLCYGIKDVSALGGVHTLNLTSCGGITDVSALGGVHSLALTGCERVTDISALGDVYTLVM* # ORIGINAL: g2272.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 10842 11798 . + . ID=g2272;Name=g2272.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 10842 11798 . + . ID=g2272.t1;Parent=g2272;Name=g2272.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 10842 11798 . + . ID=g2272.t1.exon1;Parent=g2272.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 10842 11798 . + 0 ID=cds.g2272.t1;Parent=g2272.t1 #PROT g2272.t1 g2272 MSSALAKAVSEVCIDTLRMHSPSNPDARIRHLTAFIRNFNTTSRGSRGFLNAVLIHCKQNVAPSKVFALQETWLVAILGYMRFDNGRTVTTKQKAAIQLAKELFPQFRKVADSVLKPLERTREPMPARPVPENGTVVARRSVPSMLAMAKNSRSSWTELNRLMSNMSITCPTILHMAAVMGLESVVHWLVRSVCVEYRNPQTNMTALAELVYSRLGTGSASTDDYNRWNSIITALWNPTAIEDCVPMIVEFATNHSIDKRGYEAIYELLYMFVHVAHRNTNDAVRLLCGNGNIHVLALHNAGHHDFARLLQIVPVQAV* # ORIGINAL: g2275.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 23436 23932 . + . ID=g2275;Name=g2275.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 23436 23932 . + . ID=g2275.t1;Parent=g2275;Name=g2275.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 23436 23605 . + . ID=g2275.t1.exon1;Parent=g2275.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 23436 23605 . + 0 ID=cds.g2275.t1;Parent=g2275.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 23785 23932 . + . ID=g2275.t1.exon2;Parent=g2275.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 23785 23932 . + 1 ID=cds.g2275.t1;Parent=g2275.t1 #PROT g2275.t1 g2275 MNPIPDALQFKLLCLEKVGIVFTALVNGAWKDIQQWLVDPSYFPTAEQLVVYANRRTKSTEENEDVELTPEFLAMLGAQLAAEVMKNDLLDSGMHVRVDVLPIND* # ORIGINAL: g2271.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 8759 9169 . - . ID=g2271;Name=g2271.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 8759 9169 . - . ID=g2271.t1;Parent=g2271;Name=g2271.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 8759 9169 . - . ID=g2271.t1.exon1;Parent=g2271.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 8759 9169 . - 0 ID=cds.g2271.t1;Parent=g2271.t1 #PROT g2271.t1 g2271 MNTTAVRDAYKAVLINHHRYHSPPSSADPWIGTIAIPTVITMMVGNKINIDHSTICAIVKRVSKAQYDHKRGVKRRIRTASIEMQSRLDVNSVDDTDDTTSATSILATFANESQGLLSEYEGMLADLQQQLDNLSQ* # ORIGINAL: g2274.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 17923 21717 . + . ID=g2274;Name=g2274.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 17923 21717 . + . ID=g2274.t1;Parent=g2274;Name=g2274.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 17923 21717 . + . ID=g2274.t1.exon1;Parent=g2274.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 17923 21717 . + 0 ID=cds.g2274.t1;Parent=g2274.t1 #PROT g2274.t1 g2274 MHAAADHCIPLACKVWVNLSAFLIDVKLAFTNTTRNIEPCPLARANLDAVNLSSETCCVTNTKPVNGSSCAERVFRAIAFDCRNVPDYERFVNMDGYALCTFVENSLKSIPKEITQKQTGCVIRRYVKKRGCCDAVGSGGKRGVIIPLVTTPVNIDLFFPVTHGTEDVEAKAVANTTNVVLVTIHSDSQRPPRYAAAQELEAARDFNGPNIVQLVSEVRVANHGSAFLGYREGSIIVLALRSIDNEAEWILPADTTLHGESFVMNLNDIKPLYIAECLLREGVCKPICDAIEEEEIFGFELFEMDVDSFVNSIESDALDDSERASAIKTICDFRDSLLALCHSAENGQDADGEPTQMAPVVAHNSNDGEVDEDVLSFAPVENKHQFVPSTDAPSVPVMGMDEEPADKEFAPSVANAVSAGVDGLVPELQDKKGDTTDVSHRSDVDRRLRIACEEGNEDAVQLLLDQGVDVNTRKFDRCPLHIACERGNVALIKLLLDRGANMNALASDNRVPLHFACERGNKEVVQLLLDRGANMNALASDNRVPLHFACEGGNKEVVQLLLDRGANVNARATDCRPLHIACARGDKELVELLLGRRADVNAATGDCSLPLHVACRQGNREVVQLLLDRKANVNAPATGGRFPLHFACEGGNMEVVQLLLDRGANVNAIARDGRLPLHDAYKQGNKEVVQLILEQGVDVNARATDGRRPLHLACERGSKETVQLLLDRGADMEVAAPNGRLPWHIAFETWNEDAVLLLLDRRVDVNARATDGRRPLHFACERGSKETVQLLLDRGADMKAAAPDGRLPLHFACERGSKETVQLLLDRGADVKAAAPDGRLPLHFACERGDKEMVQLLLDRGADMKAAAPDGRLPLCIAFERDDKKMVQLLLDRGADVNATASDGCRLLYVACEQGNIKMVRLLLNRGADVNVTATGGRFPLHSACEGELRPVHFGGKHKEVVQLLLDRGVDVNARATDGRIPLHFACHQGDKEVVQLLLDRGGDMNAAADGRLPLHFACKRGNMEVAQLLLDRGADVNAVTKDGRRPFHFACKRGKMELAQLLLDRGADVNAAAFDGRLPLHFACMRGEKELAQMLLDRGADVNAAVFDGRRPLHIACESQWGDNEVVQLLLSRGANVNVATTDGRLPLHFACDRGDGEVVELLLDRGANVNAAAADGRRPLHFACNQGDKEVVQLLLDRGADVNAVTADGRLPLHFALDEALVQLLRNRGGGVLDFAQFLGTVRFADRNVSHGISSLEHVRKN* # ORIGINAL: g2276.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 25288 25524 . + . ID=g2276;Name=g2276.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 25288 25524 . + . ID=g2276.t1;Parent=g2276;Name=g2276.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 25288 25524 . + . ID=g2276.t1.exon1;Parent=g2276.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 25288 25524 . + 0 ID=cds.g2276.t1;Parent=g2276.t1 #PROT g2276.t1 g2276 MTALAVFVHSSLGIGSASTDYDRTALRNPTAIEDCVPMIVKFATNHSIDTLSYEAIYELLCAPQHKRRSPLALRQRQH* # ORIGINAL: g2273.t1 original gene structure, not modified by PASA NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS gene 12914 14815 . - . ID=g2273;Name=g2273.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS mRNA 12914 14815 . - . ID=g2273.t1;Parent=g2273;Name=g2273.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS exon 12914 14815 . - . ID=g2273.t1.exon1;Parent=g2273.t1 NODE_334_length_26684_cov_25.0933_potentialcontaminant AUGUSTUS CDS 12914 14815 . - 0 ID=cds.g2273.t1;Parent=g2273.t1 #PROT g2273.t1 g2273 MAASHTTDCAETSTQALAPSARGSKTELDPSFQGEQERHREKDASHTDDYVETSTQALVLSVRDSENELDRELEQQKLAAEERNRKLELELEREKLVAEERNREFEREKFAAQLEREKLAAQLEREKLVAEERNREFEQEKFAAQLEREKLAAQLEREKLVAEECLTRSKDDSYYILTEEAVSLFITKRRIESVFGVDVPHTVEWWPQTGWTTERDFNERFLASVFQAMEPSIAESRHYFDGHRRFYLAPQNENKRGPDIVIHTGGITKTSRSGKRHPSATSVVVIGDAKLHAFTNKDIHQLYRYARAIRLCDPLRNSILTFLVSPTHVCFYQFEWSNKGQLDISEHRLYDCKSSTDEGARLLCGLFTSKDVHYPRYLDSIPANFVINKCLGRGAFGTVFELKGNSGAVLKVFKSEEARNDELNALRELAKSPNSDCRRSFVKLVNDSIDMCLIMQPLGVQDGLRPIDAAKLVDALDYLHKRVRLVHRDIRPSNLVRYRNRIVIIDLGAAIGLTTEGFYAGTTITASSRVLEMLANREIDMKAVPEDDQESLIKTLLLIWQNLTLPKLPRTASLVQKATALIEFWSNIDKVLPVEIATAFRDCVNSSERKKAIATFAEHAFCGDRSLGSWSYK* # PASA_UPDATE: g6295.t1, single gene model update, valid-1, status:[pasa:asmbl_830,status:3], valid-1 NODE_1214_length_12976_cov_40.3099 . gene 911 4155 . + . ID=g6295;Name=g6295.t1 NODE_1214_length_12976_cov_40.3099 . mRNA 911 4155 . + . ID=g6295.t1;Parent=g6295;Name=g6295.t1 NODE_1214_length_12976_cov_40.3099 . five_prime_UTR 911 1041 . + . ID=g6295.t1.utr5p1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 911 1241 . + . ID=g6295.t1.exon1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 1042 1241 . + 0 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 1492 1609 . + . ID=g6295.t1.exon2;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 1492 1609 . + 1 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 1863 2054 . + . ID=g6295.t1.exon3;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 1863 2054 . + 0 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 2287 2395 . + . ID=g6295.t1.exon4;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 2287 2395 . + 0 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 2701 2772 . + . ID=g6295.t1.exon5;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 2701 2772 . + 2 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 3140 3202 . + . ID=g6295.t1.exon6;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 3140 3202 . + 2 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 3517 3770 . + . ID=g6295.t1.exon7;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 3517 3770 . + 2 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . exon 3967 4155 . + . ID=g6295.t1.exon8;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . CDS 3967 4086 . + 0 ID=cds.g6295.t1;Parent=g6295.t1 NODE_1214_length_12976_cov_40.3099 . three_prime_UTR 4087 4155 . + . ID=g6295.t1.utr3p1;Parent=g6295.t1 #PROT g6295.t1 g6295 MQIVNCAYIQFNNKVDVRSGVPCARRGGDTMDAIVFELTPAGSITACLAFTALFVGSLYIWKTPLNRHRDSPDVIKKRFVSVSLVVILAPLILALAFGTRAHEGSKNGHTLAHWMGFRGDNAIVASALPLFLTAILFVGPLVMDYADGELREKLLDHSPRDLIFMRNIIVGPVTEEIVFRGCMIPLLVSAVGPGWAILLNPLFFGFAHTHHILHILHAQGTPVGQALIVVAVQLFYTSVFGLYSAFLLVRTGSIFGPIVSHIFCNMMGFPRFGEISEHKHSIGTHWVDGRWLSVLHTSQHIRARMMLYVGTSRSQCRRRHVTIPTNYMKTEMDAGWRCGLSLLWASCRSAFSCIHLHTPHSTIPNLWHGHPTTKP* # PASA_UPDATE: g6296.t1, single gene model update, valid-1, status:[pasa:asmbl_832,status:12], valid-1 NODE_1214_length_12976_cov_40.3099 . gene 4156 9561 . - . ID=g6296;Name=g6296.t1 NODE_1214_length_12976_cov_40.3099 . mRNA 4156 9561 . - . ID=g6296.t1;Parent=g6296;Name=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 9279 9561 . - . ID=g6296.t1.exon1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 9279 9561 . - 0 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 8402 8854 . - . ID=g6296.t1.exon2;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 8402 8854 . - 2 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 8148 8308 . - . ID=g6296.t1.exon3;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 8148 8308 . - 2 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 7030 8029 . - . ID=g6296.t1.exon4;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 7030 8029 . - 0 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 6615 6784 . - . ID=g6296.t1.exon5;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 6615 6784 . - 2 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 6419 6502 . - . ID=g6296.t1.exon6;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 6419 6502 . - 0 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 6052 6152 . - . ID=g6296.t1.exon7;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 6052 6152 . - 0 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 5809 5880 . - . ID=g6296.t1.exon8;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 5809 5880 . - 1 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 5521 5625 . - . ID=g6296.t1.exon9;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 5521 5625 . - 1 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 5138 5242 . - . ID=g6296.t1.exon10;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 5138 5242 . - 1 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . exon 4156 4942 . - . ID=g6296.t1.exon11;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . CDS 4288 4942 . - 1 ID=cds.g6296.t1;Parent=g6296.t1 NODE_1214_length_12976_cov_40.3099 . three_prime_UTR 4156 4287 . - . ID=g6296.t1.utr3p1;Parent=g6296.t1 #PROT g6296.t1 g6296 MQRQGLSGAPHAMGSGSSQSASSETTRGLHSAPAHGPLVGHAMHVRRLIEEGQGDELWLRGELEGGATGDALGEWLVAAVRTGREEMCLVLINGGADVNYRSATGGLRPLHHSVGWARLLCLLLRHGADKNATDDTGMTAVAYAAGQGQLESLHNLIDAGADVNEGTADGRMFPLQLAVQEGHRSVAAYLLARGANVMARTSNGATALHFAAHFNSAKCARMLLAAGGEVDATSDDGLTPLHVAAGILMPATVNRRSLPANRAPPLSRSVTAARGHLAVAELLLANSAEIDTKELREEQTPLHVAAAAGHVSCARILLEKEAPVNSRDRSGRTPLHLAVQQARGGVVALLIEFGCDINATDAEGRSPLHYASALGHGGCAGALVNAECDATSRDGAGYAPVHVAARAGHVTVLALLMETHPGELNARDDDGRTPLHLACASARVPCVRFLLDAGADKTAPDESGKTPLDTVRHAMLTEPPTSAAGRAYAPVCGLLEGVEVAGVPDDPCKTDDQGSAASSVQTHADGPLSVTLERDLAAVSLGQSAAGGESSVAKKRAQQKQKKKKTKHRTKQQEGAGALHSGGSSGVEHAHMPPARGGAGLPVARITNDHVTAPASGVFRIGKIRFDRVKVLGHGSHGTIVFDGFYDDRRAAIKRMLREYTTLASKEVAMLSILSESEAHPNILRYYGKEEDGEYIYLAVELCIGPVSLIHEEPSDAALASRTAVLRRLCCGPLGQDFIRKLAQQLLDGVRFLHSLNIVHNDIKPENILIGTTNSIKISDMGIAHKILGDRTSFTFTHGRPERGLFTAPEVLDESGIKTKMVDVFASGCVLHSLFTHGGHPFGGSFKAETEVNIRRGQYNLSTLAALNPEAADLVEWMLQSDPRQRPTADSALAHPLFWTDEETMSFIEDSSEPPAELLAAIEGKAAAIIGNCVPGDTVNCSDGRGLSSGTGTLSWAMCIDRALMVHAAGHRQYDATSILDLLRLCRNIFQHFKALPATVARTVAGDAGRGGIGLAATQAEEKVKAALAGVGARRAAVLGYFRRRFPSLIIEVYRARRSTFM* # ORIGINAL: g6297.t1 original gene structure, not modified by PASA NODE_1214_length_12976_cov_40.3099 AUGUSTUS gene 10428 12811 . + . ID=g6297;Name=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS mRNA 10428 12811 . + . ID=g6297.t1;Parent=g6297;Name=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS exon 10428 11962 . + . ID=g6297.t1.exon1;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS CDS 10428 11962 . + 0 ID=cds.g6297.t1;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS exon 12115 12213 . + . ID=g6297.t1.exon2;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS CDS 12115 12213 . + 1 ID=cds.g6297.t1;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS exon 12499 12664 . + . ID=g6297.t1.exon3;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS CDS 12499 12664 . + 1 ID=cds.g6297.t1;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS exon 12773 12811 . + . ID=g6297.t1.exon4;Parent=g6297.t1 NODE_1214_length_12976_cov_40.3099 AUGUSTUS CDS 12773 12811 . + 0 ID=cds.g6297.t1;Parent=g6297.t1 #PROT g6297.t1 g6297 MEGDTAPRRSSQREGRSVREGDMNAQRTARTATEHEHTQPRRARDEERPASAERNRRGDERHTSSAARGSRTHARASSRASENLSELLSDLENDNDENVDISNVVTDSSVSSSMADLLSLRGHGASSDHHPRGSSRKRAANRRLEREELIRQNEVLRLELSQRSMAIEELRVSCEGRVAELEEKLKDEMHSRHVMQLNMDTVVRRHQEEYQRMQETTQRELMAVRKRQQEVEAQNPLLRERVEDIKKELASLNISEARFIELKALPEDSLSIRDFVLVKFFEVVQTHKSEASSLSKQNDELRDRLAKKEAECDRRTRAYETLASSSTEKEKDLRSDVAVLEKKCLRLQAELSDTVGKIERSNFRMDNFDTVAAERDSLKKQVADINQSLTYTDAELRARTTERDELARDLADVRRQSEMLRMDKGYLTKESDMLASRCNRMEAEIARLNTVLHDAVRQREEMHERLAVVRDGSRAEYESRLEEEIAKMREETNKELAELRGNAKDLFERENRGLREARDIAVAEMERAKGSEREATQRCDRLMDEFRQLQATSDSKIVELNGELKMKAFEHERLRLLHEEAAAQLRQAKLEIDRLGKKTEENAGLRELGSKQ* # PASA_UPDATE: g6294.t1, single gene model update, valid-1, status:[pasa:asmbl_828,status:12], valid-1 NODE_1214_length_12976_cov_40.3099 . gene 162 519 . + . ID=g6294;Name=g6294.t1 NODE_1214_length_12976_cov_40.3099 . mRNA 162 519 . + . ID=g6294.t1;Parent=g6294;Name=g6294.t1 NODE_1214_length_12976_cov_40.3099 . five_prime_UTR 162 162 . + . ID=g6294.t1.utr5p1;Parent=g6294.t1 NODE_1214_length_12976_cov_40.3099 . exon 162 519 . + . ID=g6294.t1.exon1;Parent=g6294.t1 NODE_1214_length_12976_cov_40.3099 . CDS 163 345 . + 0 ID=cds.g6294.t1;Parent=g6294.t1;5_prime_partial=true NODE_1214_length_12976_cov_40.3099 . three_prime_UTR 346 519 . + . ID=g6294.t1.utr3p1;Parent=g6294.t1 #PROT g6294.t1 g6294 ARALYDYVAAKGDELSFREGDVMYVTVKNPDGWWEGVLNGAVGLFPGNYCEEEPLHDSYA* # ORIGINAL: g2171.t1 original gene structure, not modified by PASA NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS gene 105 3441 . + . ID=g2171;Name=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS mRNA 105 3441 . + . ID=g2171.t1;Parent=g2171;Name=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS exon 105 1015 . + . ID=g2171.t1.exon1;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS CDS 105 1015 . + 0 ID=cds.g2171.t1;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS exon 1429 1930 . + . ID=g2171.t1.exon2;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS CDS 1429 1930 . + 1 ID=cds.g2171.t1;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS exon 2194 2247 . + . ID=g2171.t1.exon3;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS CDS 2194 2247 . + 0 ID=cds.g2171.t1;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS exon 2518 2835 . + . ID=g2171.t1.exon4;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS CDS 2518 2835 . + 0 ID=cds.g2171.t1;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS exon 3346 3441 . + . ID=g2171.t1.exon5;Parent=g2171.t1 NODE_2378_length_6495_cov_39.1829_potentialcontaminant AUGUSTUS CDS 3346 3441 . + 0 ID=cds.g2171.t1;Parent=g2171.t1 #PROT g2171.t1 g2171 MMRRFMFTLLGNALVKHTFAEFHDSMATDAPKKLFFIPRFRPSGPASTLLHQTSRSITMTDIVDISMLTRVMEETPVVRVLGNLMGPRVGPDGILTTGDGCTQQLHDSDHAVNSEKEARNEARFQLNGRIALTMYRSPIDYGGSGNLRVRRAYAVEEVVFGGLSASAEEDAEGHRRHNSGSFKSLSKYFGNKYGLTITRPMQPLLRCRGYPAVTRVRNCNSFRDVGSGDVCMGSEVTVGCDAVNVGADDVDGGDGIALRTGLELMSEFATVSGITVEMYSLGRYIPDAYGVLLRALEHGDSVDGMAALLGISGCNPDILRIAFLHPSSSDASEGSRLCFERMEFVGDAILGLTAAVSVAKMRAHDHARRGGSSVLSRIDMEREVSQCVRNVHLSSVCDSLGLWQLASAQHSPNEWAGVTKAKADVLEAVIGAVASGDGLDSAIAFSRSHVIGTRLQSASNDNGALKALVGQCSDMTTSMANDVTASGFVCAALVGEQVLKLLVVVHLFHAHPKKGPHQLTAMAAELRSKVLLARALFNGTTSTTPSTTDTASTDDNCTRTHSVDAPRGVGEFGEAELERIAGVLHATIGALYIDKGLSSFGHCACNLDLGEGLFHCRILPVATVPP* # PASA_UPDATE: g11638.t1, single gene model update, valid-1, status:[pasa:asmbl_6923,status:12], valid-1 NODE_4070_length_2244_cov_39.8202 . gene 164 839 . - . ID=g11638;Name=g11638.t1 NODE_4070_length_2244_cov_39.8202 . mRNA 164 839 . - . ID=g11638.t1;Parent=g11638;Name=g11638.t1 NODE_4070_length_2244_cov_39.8202 . five_prime_UTR 599 839 . - . ID=g11638.t1.utr5p1;Parent=g11638.t1 NODE_4070_length_2244_cov_39.8202 . exon 554 839 . - . ID=g11638.t1.exon1;Parent=g11638.t1 NODE_4070_length_2244_cov_39.8202 . CDS 554 598 . - 0 ID=cds.g11638.t1;Parent=g11638.t1 NODE_4070_length_2244_cov_39.8202 . exon 164 270 . - . ID=g11638.t1.exon2;Parent=g11638.t1 NODE_4070_length_2244_cov_39.8202 . CDS 164 270 . - 0 ID=cds.g11638.t1;Parent=g11638.t1;3_prime_partial=true #PROT g11638.t1 g11638 MALEDLSNSFSAAAAQHQAGENKTTRFVVGSIDKLGVTLVSEALHTVHVP # ORIGINAL: g11639.t1 original gene structure, not modified by PASA NODE_4070_length_2244_cov_39.8202 AUGUSTUS gene 1429 2002 . + . ID=g11639;Name=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS mRNA 1429 2002 . + . ID=g11639.t1;Parent=g11639;Name=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS exon 1429 1449 . + . ID=g11639.t1.exon1;Parent=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS CDS 1429 1449 . + 0 ID=cds.g11639.t1;Parent=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS exon 1593 1646 . + . ID=g11639.t1.exon2;Parent=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS CDS 1593 1646 . + 0 ID=cds.g11639.t1;Parent=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS exon 1748 2002 . + . ID=g11639.t1.exon3;Parent=g11639.t1 NODE_4070_length_2244_cov_39.8202 AUGUSTUS CDS 1748 2002 . + 0 ID=cds.g11639.t1;Parent=g11639.t1 #PROT g11639.t1 g11639 MSSDEALESDNDVFDDAASQEDGRESGHQEDPVSEDEAPADEQKSVIVHILKQLSIGEWVLVTCHVMLCPPLVFTHCSARITISRNGFDARHSANCVFGEAVAPRNVCW* # ORIGINAL: g9873.t1 original gene structure, not modified by PASA NODE_642_length_19753_cov_40.1547 AUGUSTUS gene 13487 18799 . + . ID=g9873;Name=g9873.t1 NODE_642_length_19753_cov_40.1547 AUGUSTUS mRNA 13487 18799 . + . ID=g9873.t1;Parent=g9873;Name=g9873.t1 NODE_642_length_19753_cov_40.1547 AUGUSTUS exon 13487 18157 . + . ID=g9873.t1.exon1;Parent=g9873.t1 NODE_642_length_19753_cov_40.1547 AUGUSTUS CDS 13487 18157 . + 0 ID=cds.g9873.t1;Parent=g9873.t1 NODE_642_length_19753_cov_40.1547 AUGUSTUS exon 18413 18799 . + . ID=g9873.t1.exon2;Parent=g9873.t1 NODE_642_length_19753_cov_40.1547 AUGUSTUS CDS 18413 18799 . + 0 ID=cds.g9873.t1;Parent=g9873.t1 #PROT g9873.t1 g9873 MDVYASPGDSVARELRRLIERTGAVNGGVVGVMLINAGYHTSNGVSKFKSFLSEYSHTFRLNESNRVTLIDSGYGVGRKKVVLSPSECRRDHTTIAQMVANQLLATGPMLASDLNDVLYQHGYPGGTRKLVFNFCDTFEFHPRTTCIGLRDEAVVTWDKGEGDTDGSYDDSDTSATDSAASDDVRDDSSSDNRSSSEHGRSNTVPRQSTEGRVIAMLCLELADGPMPVRSLGAKLSSSMFVHIRKNHGPIRTFLQTLPDMFTLLTNAESGGEVCALTAKGLEFARNTAVADSLESPPSSAAPDQHARRDTRDQSLLERRTDDRRDSHSDRHGDRRDSHGDRHDRHSDSDRRDSHGDRHKYAGDAQSRSEWGDINSRLSKRDSASDDMRSGLETGDEMGAREARDRPSESRARDHDRRDTGYRDHPHVDDKELTGGYYQRLEGEENRRTHKDMGNTDYLMQRARERRPEREQERERERERESDRYTGRERDTGRDAGVRVETAGVTDRGEGGNEREREREREREREWERESERYPGRERGRDAGVRVETGGVTDRGERGNERDREREKERERGREREREKERERVKEREREREREREKERERVKERERERERKREKERERVKETERQREREKEKGKERERETEREREKERETEKEREKEREGEREREKDKGRARVGDGHRGSEWAGESDQLNGSADSAMRNVVTLTHNDAGIHRYPREDQCMGTSFGNVAYIDLYSVKADDTDGHVRQTHADVDNDRSGARVQTESTVARHDGYGHTASSFTDARDLSSFTEARDLRKRTRDALVDDRHSDDSHAAKLPRLDPISRISAPHAHEPSTYGALEVAVHAAAPLPSNEAKSVPTPTLPPSSAAHHTRGPAEVPTSNTAAPQRVKGVGNTAATHQRESTVRQLQALNNKKRAQPAAPPGGLPTFTISAGGKQIGVYFVNNHAEMGRAFARFKVTKVVAIRCEMSSMDDNADVALVQVHILVQTDALPSCIYLFDVLRPGIGAMCLANVWKKLICNPAITKFFHDAPQGIDGIRRTVAKVDARANDVDLSSLKNINDTLVSYALFIHLTGGSVKRRTPLDDVLRGVALPKNPRSAYVHAQLMRDHAAWTWRPLAKPFLEFAAHEVASLRDAHELLKTKLSCAIEEIAALGSLLAVEEYRTSMHKTKGGQHVHLNCEYDMGEYDARRNAFVYTPSSQAPTETDTVLGVMSGASGDKRAMESAPDASTATIPPDAATAKGESVDSMDTNGAVNTSNETNASPATGHVPLMASRDEDADALLRMLPGDVYALLLQECLERGFSGCGGICEVRIDEGVPMSVLFNDEKGSQKTFEGVVVDVEEVLEALRAAHAKSSRWRHNMFGKDKRMGLEGTLHRICAIGGRDDHPVGLTLRVGHAQVGSARILGDVITSLLAPKAGDTPNSLLVVGRPGVGKTTLLRDIARTLADEHCIQQRVVIVDTSGEIGGDGVRAHPAVGSSRRMCVGVDTTLDVTLLEAVQNHNPLVLVVDEIGKPSHVAAVKTISKRGTALVGTAHGVSLSSLIENPELRPLVGDVTAMPLGDATAKELNRSSGNGDGGLRKTHTERKGKPVFTRLVEVQKRNHFVIHWNVQRAVDSSLGNQVKAAVQEERWFDAATNKWKARWTRVSNTSSASGAPFAEGRRGGTGGAMWLQSILDSVLARRRNK* # PASA_UPDATE: g9870.t1, single gene model update, valid-1, status:[pasa:asmbl_8652,status:3], valid-1 NODE_642_length_19753_cov_40.1547 . gene 4760 7251 . - . ID=g9870;Name=g9870.t1 NODE_642_length_19753_cov_40.1547 . mRNA 4760 7251 . - . ID=g9870.t1;Parent=g9870;Name=g9870.t1 NODE_642_length_19753_cov_40.1547 . five_prime_UTR 7121 7251 . - . ID=g9870.t1.utr5p1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 7093 7251 . - . ID=g9870.t1.exon1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 7093 7120 . - 0 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 6630 6741 . - . ID=g9870.t1.exon2;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 6630 6741 . - 2 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 6190 6285 . - . ID=g9870.t1.exon3;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 6190 6285 . - 1 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 5802 5876 . - . ID=g9870.t1.exon4;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 5802 5876 . - 1 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 5232 5367 . - . ID=g9870.t1.exon5;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 5232 5367 . - 1 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . exon 4760 4939 . - . ID=g9870.t1.exon6;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . CDS 4847 4939 . - 0 ID=cds.g9870.t1;Parent=g9870.t1 NODE_642_length_19753_cov_40.1547 . three_prime_UTR 4760 4846 . - . ID=g9870.t1.utr3p1;Parent=g9870.t1 #PROT g9870.t1 g9870 MGCNQSTSKDVQESRTRAPNAGARKPQSTPSAAASPARNIGGGSFSGPSGDGVQFGKSYTDQRTGEQDFFKDIIQRTAENFIDVTQQSARLEVVDTTDRIKEYSDAVNQAGLGKSALSLYALPKSSVTTANVAAVISAPVAISKADVDFLSTVATGLLNAASYMQVKDCGALIATLPDI* # PASA_UPDATE: g9869.t1, single gene model update, valid-1, status:[pasa:asmbl_8649,status:12], valid-1 NODE_642_length_19753_cov_40.1547 . gene 257 3947 . + . ID=g9869;Name=g9869.t1 NODE_642_length_19753_cov_40.1547 . mRNA 257 3947 . + . ID=g9869.t1;Parent=g9869;Name=g9869.t1 NODE_642_length_19753_cov_40.1547 . five_prime_UTR 257 258 . + . ID=g9869.t1.utr5p1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 257 360 . + . ID=g9869.t1.exon1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 259 360 . + 0 ID=cds.g9869.t1;Parent=g9869.t1;5_prime_partial=true NODE_642_length_19753_cov_40.1547 . exon 664 764 . + . ID=g9869.t1.exon2;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 664 764 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 1088 1178 . + . ID=g9869.t1.exon3;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 1088 1178 . + 1 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 1428 1517 . + . ID=g9869.t1.exon4;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 1428 1517 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 1903 1995 . + . ID=g9869.t1.exon5;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 1903 1995 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 2213 2336 . + . ID=g9869.t1.exon6;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 2213 2336 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 2672 2814 . + . ID=g9869.t1.exon7;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 2672 2814 . + 2 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 3191 3301 . + . ID=g9869.t1.exon8;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 3191 3301 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . exon 3551 3947 . + . ID=g9869.t1.exon9;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . CDS 3551 3649 . + 0 ID=cds.g9869.t1;Parent=g9869.t1 NODE_642_length_19753_cov_40.1547 . three_prime_UTR 3650 3947 . + . ID=g9869.t1.utr3p1;Parent=g9869.t1 #PROT g9869.t1 g9869 VRTFAPKESSIHSSMSLNGRLYIKHVTAEEQLAPSITSIERTTSPVLEMDTRELAKQLTLHDFELFARIDPVEYINQVWKRIDAMTANINTFTQRFNQVNLWVVTEICITRQVNKRVLVVKKFIKMAKYLRAANNFNSLFAVLSGLSNVSVSRLVGTWEKVPHKYIELFEELNSLMDPSRNMKSYRMLLINATPPLIPFFPILMKDLFFIHEGNDAKVKGLINYDKLRMISKIVRFADGMRSMPYDPQMLLQEGSKRRTTVHGGDDLSEKSVSAQRIEEYVKSFQVIDDQRVLSKLSREIEPPGRTRTKRGWSVSTK* # PASA_UPDATE: g9871.t1, single gene model update, valid-1, status:[pasa:asmbl_8650,status:12], valid-1 NODE_642_length_19753_cov_40.1547 . gene 7539 11445 . + . ID=g9871;Name=g9871.t1 NODE_642_length_19753_cov_40.1547 . mRNA 7539 11445 . + . ID=g9871.t1;Parent=g9871;Name=g9871.t1 NODE_642_length_19753_cov_40.1547 . five_prime_UTR 7539 7644 . + . ID=g9871.t1.utr5p1;Parent=g9871.t1 NODE_642_length_19753_cov_40.1547 . exon 7539 10908 . + . ID=g9871.t1.exon1;Parent=g9871.t1 NODE_642_length_19753_cov_40.1547 . CDS 7645 10908 . + 0 ID=cds.g9871.t1;Parent=g9871.t1 NODE_642_length_19753_cov_40.1547 . exon 11029 11445 . + . ID=g9871.t1.exon2;Parent=g9871.t1 NODE_642_length_19753_cov_40.1547 . CDS 11029 11445 . + 0 ID=cds.g9871.t1;Parent=g9871.t1 #PROT g9871.t1 g9871 MSSPSVGAIATRMWNIVAQRPDSRLQGGDFGNFLLRQGYDGTIKDFLALFPDMFEHRFNNYVYLVQHAAHGAHHAYGHSPPAPASQASSDGRTPQDVATVEADPQQVAEMKKIIVGAMRSDPLRRLQGGIVGTMLRSHGYPGTVKDFLASTLDLFDHRHDNYVYLREAARAGVAAHHVTLRGPAHAVHQAQTHVHTSTHDVDTKALHELCFVLCEYPEGKGVLMSAIPPKLSLRTRNHILACGKLTAFVRSHSEYLQTWNEGMAGRDMCALTKQGRAYISSLKTPTTSVGASPGASAAASTPATHLNHLASNSSVSNTGISETATKSWAELARSRFVDTPSYSSADASATSASMATAIATSSVHTTHGATSISPPVLDSTVASVYQDSAVAHVSREYTTVHPAATNHVTAVTHVPPITRIRVPRPNSSDAAAVVTTIAGSSLGDSGNFSSGSLSMTGGVGAQNSAAQEGMASLPSTAQQSAHVRPERLSGQGEGETVPTLETAIPHVLVDSIDKLAPAFSRLTECTTVAVSCTCVGESDSAVLSLIVVLAVATKAHPSAVIYIFDALNPLVGRACVQLVWRIICRETVTKLCYDQRRLDIIGRVFMSYSAGQVDVECARGALGISDIQVLYGRVRLLCEGETTKRRAPLDEIMQHLGLPTNPHRDTMAERMSREADFMKRRPLDRDALAYAAWDVLPMPNAESILKSRITEAAVALATRGTVAVEEQRRSTYVTSGGQAVRYDEKYTISPGVTGSDFTYEPVEDDIDAQRPKVADVSANEESTHVTSEGRAMCKDVHDDVDMLLRLIPDDIRLKIVGTSDALGLGVTRLHEVRIDCGKDVSVLFNDLNATQCTLDGVTASVSDVIAALTLLHDGVAETDVTRTTGGGGIANRPLFGRDNRAGMEGTLHRITVIRNKHLHPVGLTLRVGRAAVGAARMISDVVAGVLPGKSGMSAPQSILLVGRRGVGKTTLLRDIARRLAEDSRAAQRVVIVDTTGDIGGHGDNAHPSIGKARRMHVPVALEHTIIEALENHNPRVLVIDDIATSAHTGALRTCVRQGVAFVGAVHEESLFSMAENSELIALVSESALASVCSRASQAGDGTETAARPENGEIAYMVSPRRKSTPLCSRVVEIPERNRVIISWGVARGMNTLPGESSGNASFAVVREERWLDDACGVWKAKFTRVLSGNAGTRSARAVDAAGTSIAEPSWVRALLDKTNRLQSGRP* # PASA_UPDATE: g9872.t1, single gene model update, valid-1, status:[pasa:asmbl_8651,status:12], valid-1 NODE_642_length_19753_cov_40.1547 . gene 11799 13003 . + . ID=g9872;Name=g9872.t1 NODE_642_length_19753_cov_40.1547 . mRNA 11799 13003 . + . ID=g9872.t1;Parent=g9872;Name=g9872.t1 NODE_642_length_19753_cov_40.1547 . five_prime_UTR 11799 11826 . + . ID=g9872.t1.utr5p1;Parent=g9872.t1 NODE_642_length_19753_cov_40.1547 . exon 11799 13003 . + . ID=g9872.t1.exon1;Parent=g9872.t1 NODE_642_length_19753_cov_40.1547 . CDS 11827 12636 . + 0 ID=cds.g9872.t1;Parent=g9872.t1 NODE_642_length_19753_cov_40.1547 . three_prime_UTR 12637 13003 . + . ID=g9872.t1.utr3p1;Parent=g9872.t1 #PROT g9872.t1 g9872 MEGENPSNALAKDAWALEAYSLGVGNLFGGDSSSDDEDASHAGEGSDGGDGGGFAQQYRLRTLPFPGGHSVTVREFTYHRWNANMTWPGNEKFADWLHSGAGKERLCGRRVLEVGSATGALAIWLHKHEGCNIVTCDADDADIAENIVHNCRLNGVDPPLRHIPHTWGTQLPPGAADEFDVIIASDILLYTHSYAALIYTCRQLLSSPVRMTGNSSSPASEAERRHFIISWRRRMEDRLLFFNMARDAGFVVDEPIQGLLFDMYLPAST* # ORIGINAL: g12621.t1 original gene structure, not modified by PASA NODE_3243_length_3925_cov_36.0223 AUGUSTUS gene 249 3282 . + . ID=g12621;Name=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS mRNA 249 3282 . + . ID=g12621.t1;Parent=g12621;Name=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 249 593 . + . ID=g12621.t1.exon1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 249 593 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 743 856 . + . ID=g12621.t1.exon2;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 743 856 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 1090 1170 . + . ID=g12621.t1.exon3;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 1090 1170 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 1465 1565 . + . ID=g12621.t1.exon4;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 1465 1565 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 1768 1852 . + . ID=g12621.t1.exon5;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 1768 1852 . + 1 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 2097 2145 . + . ID=g12621.t1.exon6;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 2097 2145 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 2461 2507 . + . ID=g12621.t1.exon7;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 2461 2507 . + 2 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 2748 2858 . + . ID=g12621.t1.exon8;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 2748 2858 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS exon 3139 3282 . + . ID=g12621.t1.exon9;Parent=g12621.t1 NODE_3243_length_3925_cov_36.0223 AUGUSTUS CDS 3139 3282 . + 0 ID=cds.g12621.t1;Parent=g12621.t1 #PROT g12621.t1 g12621 MAGLLTAAPAFNFRSNLIEALVPRMDPRFSEEASVSFICRAFVHLREFISVSVTCPNWLLLCRLNCLFSALQIGHVCFEAFKELFREDITGDATLEAVKAIAKTVKSKNYAVHRNLVDALRSLKLDADLAVLKDLNPVTNMRSSKHVSKSKKKRNKVEAELERELKEQDAVASKEERQRLQTEMIKHTFLTYFRVLKNAPKSSLLPAVLAGLAKYAHLINIDFFADLLEALRNVLNESLSFESSLQAIATAFRVLSGQGQALNIDLKDFYSALYTSLERIAAFAKRLCAVSLHVTPQVAIGMLTAARALIKKYPRVELLLDSDVTTSGVYRDDVDDPEYANALASTAWELSMLKVGRG* # ORIGINAL: g10862.t1 original gene structure, not modified by PASA NODE_4994_length_1093_cov_26.2171 AUGUSTUS gene 244 432 . + . ID=g10862;Name=g10862.t1 NODE_4994_length_1093_cov_26.2171 AUGUSTUS mRNA 244 432 . + . ID=g10862.t1;Parent=g10862;Name=g10862.t1 NODE_4994_length_1093_cov_26.2171 AUGUSTUS exon 244 432 . + . ID=g10862.t1.exon1;Parent=g10862.t1 NODE_4994_length_1093_cov_26.2171 AUGUSTUS CDS 244 432 . + 0 ID=cds.g10862.t1;Parent=g10862.t1 #PROT g10862.t1 g10862 AVGETVCVNPGRLTKGEGGGTYARFAVHAHPAVVANPATAERSQEEVQHKAADRVRVEIVRI* # PASA_UPDATE: g4867.t1, single gene model update, valid-1, status:[pasa:asmbl_9161,status:12], valid-1 NODE_744_length_18216_cov_37.8321 . gene 232 3212 . + . ID=g4867;Name=g4867.t1 NODE_744_length_18216_cov_37.8321 . mRNA 232 3212 . + . ID=g4867.t1;Parent=g4867;Name=g4867.t1 NODE_744_length_18216_cov_37.8321 . five_prime_UTR 232 233 . + . ID=g4867.t1.utr5p1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 232 471 . + . ID=g4867.t1.exon1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 234 471 . + 0 ID=cds.g4867.t1;Parent=g4867.t1;5_prime_partial=true NODE_744_length_18216_cov_37.8321 . exon 667 809 . + . ID=g4867.t1.exon2;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 667 809 . + 2 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 1119 1251 . + . ID=g4867.t1.exon3;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 1119 1251 . + 0 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 1561 1682 . + . ID=g4867.t1.exon4;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 1561 1682 . + 2 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 1896 1973 . + . ID=g4867.t1.exon5;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 1896 1973 . + 0 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 2205 2280 . + . ID=g4867.t1.exon6;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 2205 2280 . + 0 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 2495 2575 . + . ID=g4867.t1.exon7;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 2495 2575 . + 2 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . exon 2867 3212 . + . ID=g4867.t1.exon8;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . CDS 2867 3111 . + 2 ID=cds.g4867.t1;Parent=g4867.t1 NODE_744_length_18216_cov_37.8321 . three_prime_UTR 3112 3212 . + . ID=g4867.t1.utr3p1;Parent=g4867.t1 #PROT g4867.t1 g4867 VSGVQDPSSSSAHPGASVSKEATTAVAHTTQQHHVHGPNPHLLTTAIDVSIAVLGSNAISATCRHDCKSCNMSVNRQTEATPLLGGGKETEKELPWYTHLMRQLFVTFDVDVFTNDSAFGRILTIIKVPIVVLLRLSIPVVDEDEPNANWCKPLQLIQCFTAPVIAALITNLYADKLGSHFYLWELALIFGATMFVLVLFTSETSKPPKYHVVFGFLGFLASVVWIYGIANEIVNLLESLGRIFKISNALLGLTVLAWGNSIGDYIANLTVARMGFPRMAVGACYGAPLLNILFGVGISCLIATTTISDPYPFELSSSLTVSLSFLIASLVSSVVFMVINKFSAGRGFGIFLVVLYIAFLVAAVTVEVMHV* # ORIGINAL: g4868.t1 original gene structure, not modified by PASA NODE_744_length_18216_cov_37.8321 AUGUSTUS gene 3696 9907 . - . ID=g4868;Name=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS mRNA 3696 9907 . - . ID=g4868.t1;Parent=g4868;Name=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 9857 9907 . - . ID=g4868.t1.exon1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 9857 9907 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 9467 9497 . - . ID=g4868.t1.exon2;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 9467 9497 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 8866 9119 . - . ID=g4868.t1.exon3;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 8866 9119 . - 2 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 8274 8631 . - . ID=g4868.t1.exon4;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 8274 8631 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 7003 7980 . - . ID=g4868.t1.exon5;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 7003 7980 . - 2 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 6610 6794 . - . ID=g4868.t1.exon6;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 6610 6794 . - 2 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 6006 6331 . - . ID=g4868.t1.exon7;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 6006 6331 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 5798 5837 . - . ID=g4868.t1.exon8;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 5798 5837 . - 1 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 5439 5565 . - . ID=g4868.t1.exon9;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 5439 5565 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 5139 5242 . - . ID=g4868.t1.exon10;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 5139 5242 . - 2 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 4800 4870 . - . ID=g4868.t1.exon11;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 4800 4870 . - 0 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 4430 4497 . - . ID=g4868.t1.exon12;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 4430 4497 . - 1 ID=cds.g4868.t1;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 3696 4168 . - . ID=g4868.t1.exon13;Parent=g4868.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 3696 4168 . - 2 ID=cds.g4868.t1;Parent=g4868.t1 #PROT g4868.t1 g4868 MLVSSTAGPRERSEHLRLCVNHINNKTDGWFDDVLPPEITFAYYLNTTGVCTPNIALGSVMWQVLTANVFAVVGPGCSVDSIAVSQLLGLGTFKRPQISYSATTPQLSDKKAYPTFMRTTLSDDFQGRALAELCVFHGFRRVGVMKTDSAYGQGIAVVFARHAARLGISVVAQESFVEFDATDYTQQLGVLKQAVVRVILLFAQASDAYKIFKQALSMGLMSPNHQWIGSDVVLSVQSYQYTANGSIFTDETVRTAMFGVLGVQPSSGYGPRFTSYMALWKSLDSSYFDSDGDRTTVNAYGPSSYDACVALAMGVNATLAKGKLETDADDLLANLKNVSFVGVSGEVSFDANGDRVSGMYNIMNFNRTVGQPIGTWDITNGIAHSRAAVFSNGLTIPPVDGSCPDNCLGEGACDVNVGRCTCNTGRTGANCSVVAAETLSQQTTGSVIACGHIAHYKAAATQIGSTLTFRMKSGRDVQTGSFDSLLFVRRGTSLLAVNVTDPAFAPRLDASDTDYQRYSFDIATSDALGDYFVDIYGTGRSCPASYRLEFIVTLPPSGSGGDNNVGVIVGVIVSFAVAVAVAGVIVFGVIKRRFADKVASMNNLTIDIAEIEFKEHIGSGASSHVYRAVYRSSVVAIKLINTKKDDDGMNARRSGGSGGSGHHHSNNKNNSNGAESSFAATVDAGTSDGFGFGGKKSLGTRIRNRLVGPTMSKPNLEITSAFLEEVATMISLRHPNIVIFMGAGVKHPDLFIVTEFMENGCLDSLLGNERFQMGWRLRIDFALDAAKGMQFLHSLTPPILHLDLKTPNLLIDGRLRLKVSDFGLSTAMNGKESRFHQGTILWMAPEMLRQDPTAVRPPADLYAFGVILWEMCSRIYPYAANLTLGNTFAVALAYLVVSKGMRPRPLPVGCDEYVHIMKDCWDPNPSARPSFTEVVQRLEELRFSSWPEPLPDRDVTFRLTRIDSHSWSDAAARRAQAERELSAMHAAIGNALLTTIAGHRVVDASKKQAPVAEEHDNALLP* # ORIGINAL: g4870.t1 original gene structure, not modified by PASA NODE_744_length_18216_cov_37.8321 AUGUSTUS gene 17022 17987 . - . ID=g4870;Name=g4870.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS mRNA 17022 17987 . - . ID=g4870.t1;Parent=g4870;Name=g4870.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 17022 17987 . - . ID=g4870.t1.exon1;Parent=g4870.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 17022 17987 . - 0 ID=cds.g4870.t1;Parent=g4870.t1 #PROT g4870.t1 g4870 MTVIRNLASNASLGAQLLPIVNDTVTVTTNIPSTLRECDQLSGSALKITVGSDVCLEQTFDSPLTPLLYAKAINYVLLVRDLATFDIISLLTPSLFSRKEYVSINSTQRFWVNVGNTPCDPCLISVLSTLDYLAHKPNSTRRREIGMGDAHQHPVPIEHLTTIRIDRDTQELFLSNASLAAVVYAQANINPGDSGGGGVDTGVKVGVGVGIGVGAVGAASCCLVLLAARRRRKSKKKKRPDDKTKIASAAVGTDTLTHADGDVHSYVHSHDQSVHVTHDVDDHYSPFSMRNTHPFAQSVESNIHQHDHVTDAHTQHSGGLS* # ORIGINAL: g4869.t1 original gene structure, not modified by PASA NODE_744_length_18216_cov_37.8321 AUGUSTUS gene 11386 15610 . + . ID=g4869;Name=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS mRNA 11386 15610 . + . ID=g4869.t1;Parent=g4869;Name=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 11386 11458 . + . ID=g4869.t1.exon1;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 11386 11458 . + 0 ID=cds.g4869.t1;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 11638 12068 . + . ID=g4869.t1.exon2;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 11638 12068 . + 2 ID=cds.g4869.t1;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 12215 12386 . + . ID=g4869.t1.exon3;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 12215 12386 . + 0 ID=cds.g4869.t1;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 12713 12817 . + . ID=g4869.t1.exon4;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 12713 12817 . + 2 ID=cds.g4869.t1;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS exon 13155 15610 . + . ID=g4869.t1.exon5;Parent=g4869.t1 NODE_744_length_18216_cov_37.8321 AUGUSTUS CDS 13155 15610 . + 2 ID=cds.g4869.t1;Parent=g4869.t1 #PROT g4869.t1 g4869 MAHSSTPVSSEKAHYGRSLSTGSVESTPLSPGLDDESARITKFTEEIKSLQRLIDLEVKNLLTLRNAQHSFRRMNSSSSAGAISGPLSPSLPPHSPMSASHGSGGGEGRLELEMGELLEKVLTHFAREMRAYRECELLCDRLCVPCSAPKQPLDQWARTHALTDDTRTKLHGFFLQDLLSAYENGLLADVLVERRVTPHDSSEISASLANLKARQGRGLKKRVSFPNDTSSPLPIPPSTPSSRAVPNVNVDDAPDEPKGDATSPTLYLNRRISHSIAHRFSLRSLRLPSPCHYCQKMLLVGVVCKECGYRCHYRCSKRTPPSCGLPSELENYFRVLVATAPMVIRSPSASFPSGGALPKSSAGGNLGNRRGYSSASQPHLSGSPSSYSLHVHPGATGVELVVDDGVPAMRKASSCPLFDEHLMVSTGVDMSFDSAASSPRAESVESLNHSSGASTPSVHSGDGLVLHGSGLSSSFVKRVPRMGSIDETALDCVENGVAACGCDDVHHCPAHVSQQDGLYRSNTVSTGGGAGTALLSGAPQLREQRAASFGSSGTSSIFRTRMNSNESNASSSASNSSAAAQGGFFSPVSEVGTPWECGVSSPPGTPLSPGVSESPLSVSPVSDSHGSPVNGGIHPGGNLVAPGAAKLSVPSPSRQRTVSAPQRLSHRDEDDASPTHTETSSAVGSPNAHEEVSLRPDAIEDAQHGLRHAFAPPPVGLHSPALSVVHERGSDASVSSGASGGRRTPRAVKFRTWDHGHRSSFHEWEIPFSEIEIGGRIGTGLTGTVYRGFWHGDVAVKVLKAANPTPPQLAAFRREVGVLRRIRHENVVLFMGACTTAPHLAIVTRYCEGPSLDTLIKGETSFAITQIADICMQVAQGMEYCHAKGIIHRDLKTKNVFLEHGGRVTIGGFGLATATQSLAYASQGSEGSLVSASTPSVSQSSSLAPPPAPASGPVRKGSVRSMAPELFSADIDPYTTKSDVYAYGILMFEMLSGTVPFKELEPFQIVYRVSVVRALPDLSLLRRDSPPLLRLVITDCLSSAPEARPEFTEVLVRLEAIPKTKVRSPSMPRLRRTQTVAR* # ORIGINAL: g3689.t1 original gene structure, not modified by PASA NODE_2128_length_7586_cov_42.0671 AUGUSTUS gene 4583 7081 . + . ID=g3689;Name=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS mRNA 4583 7081 . + . ID=g3689.t1;Parent=g3689;Name=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 4583 4730 . + . ID=g3689.t1.exon1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 4583 4730 . + 0 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 4856 5018 . + . ID=g3689.t1.exon2;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 4856 5018 . + 2 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 5163 5254 . + . ID=g3689.t1.exon3;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 5163 5254 . + 1 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 5546 5838 . + . ID=g3689.t1.exon4;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 5546 5838 . + 2 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 6162 6296 . + . ID=g3689.t1.exon5;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 6162 6296 . + 0 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 6533 6623 . + . ID=g3689.t1.exon6;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 6533 6623 . + 0 ID=cds.g3689.t1;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 6876 7081 . + . ID=g3689.t1.exon7;Parent=g3689.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 6876 7081 . + 2 ID=cds.g3689.t1;Parent=g3689.t1 #PROT g3689.t1 g3689 MAIATRAGAPDDGFWRWLDTCGDADRHGFLSRLMEHCPPRSLLFMREAMLSYLQWDIVGMLPSEIVVRIFGLLDPKSLSRAARVSRSWRQNASKDALWKTHLAGRGWSYVCGDRGCTPMEAYAWKSATESNWTRVFAASDILLTGSADKSLRVWDLPSGKFRTLLNGHEAEVCSVHHDGRIAISASCDAAIFVWDVVAGKLLRSIVGHTDYVVSVRFDGDRILSGSFDCTVKLWPATSGAFSGVVPIRTFSGPTKRVKAVLMFEDYVIAAGADLFIRVWARDTGAFVMSFHGHTEEIWSLSMAGKATANMARLVSVSRDAVCVHNLRDGTTLLTVKDKLQKTTLTCVDATDSIVACSSFDKSVLIYDFGGPIISN* # ORIGINAL: g3688.t1 original gene structure, not modified by PASA NODE_2128_length_7586_cov_42.0671 AUGUSTUS gene 87 3314 . - . ID=g3688;Name=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS mRNA 87 3314 . - . ID=g3688.t1;Parent=g3688;Name=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 3230 3314 . - . ID=g3688.t1.exon1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 3230 3314 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 2868 3006 . - . ID=g3688.t1.exon2;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 2868 3006 . - 2 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 2412 2604 . - . ID=g3688.t1.exon3;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 2412 2604 . - 1 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 1874 1951 . - . ID=g3688.t1.exon4;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 1874 1951 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 1365 1505 . - . ID=g3688.t1.exon5;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 1365 1505 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 850 966 . - . ID=g3688.t1.exon6;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 850 966 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 369 527 . - . ID=g3688.t1.exon7;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 369 527 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS exon 87 167 . - . ID=g3688.t1.exon8;Parent=g3688.t1 NODE_2128_length_7586_cov_42.0671 AUGUSTUS CDS 87 167 . - 0 ID=cds.g3688.t1;Parent=g3688.t1 #PROT g3688.t1 g3688 MAEHGRTDEDDAEAFKLTIEGFDDALRNDLELGSPLSQVEAMAADFFPSRHENILASYFFMQGLPTFITTLAKRNDAFSAQTAERINEFFQRCIEYAVQTINDDNVTLWDAVGLLFNEQLCTFYTYNGHVTIRANTGKEGIILLRYDAKSDEDAAMSDGEDLDSADECSRFFAENMRIMTRLHGFAAIIRRIQAQPRPTLYMLRSLLRPIVKARNSFTDKFIAMFFPQLKQSVYTMLYAFSDDDIKNEDKKVLGTIQQWMRQLSLFGALPNASHDTTLFGLEMAYKYFCSPFLEKRVLGLADIRETVIQLYNANNRAATDRAPLPSMSPE* # ORIGINAL: g9874.t1 original gene structure, not modified by PASA NODE_2345_length_6624_cov_38.6893 AUGUSTUS gene 46 5425 . + . ID=g9874;Name=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS mRNA 46 5425 . + . ID=g9874.t1;Parent=g9874;Name=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 46 339 . + . ID=g9874.t1.exon1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 46 339 . + 2 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 639 794 . + . ID=g9874.t1.exon2;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 639 794 . + 2 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 1013 1225 . + . ID=g9874.t1.exon3;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 1013 1225 . + 2 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 1435 2566 . + . ID=g9874.t1.exon4;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 1435 2566 . + 2 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 2859 3575 . + . ID=g9874.t1.exon5;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 2859 3575 . + 1 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 3743 4197 . + . ID=g9874.t1.exon6;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 3743 4197 . + 1 ID=cds.g9874.t1;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS exon 4443 5425 . + . ID=g9874.t1.exon7;Parent=g9874.t1 NODE_2345_length_6624_cov_38.6893 AUGUSTUS CDS 4443 5425 . + 2 ID=cds.g9874.t1;Parent=g9874.t1 #PROT g9874.t1 g9874 GRPWYFLFTLSYWGFDKKRRQEIVVNKFHSERTRSGDAESAARLAANSEAGPPYARVGVSIRNLSKLFEGANKAAVEDLSVELYEGQITSLLGHNGAGKTTTMSILTGLYAPTSGDAFINGHSILDNMQGVRSSLGLCPQVDVLFDSLTVEEHLRFFCRLKGVPRGRVKEEVRAMMADLKLQDKWNARAETLSGGMRRKLCVGIALVGGSKTVLLDEPTAGMDPYARRATWDLILKHKAGRTIILTTHHMDEADLLGDRIAIMAAGKLQCVGSSLFLKAKYGVGYHMTIVKGDGCEESKVTETIQRNVPNAQLMTDVALELSYVLPSQSSGAFRHMFAEIDKRTHDLAISSYGVSVTTMEEVFLRVGEIAEKEELDHGDESASHNADDRENGLKARKSAKRVSTEPLMAGCSVSSGADLALSRTNGVGASDHNDVKVNVAHAGDFDRIGGERVEGRLALEYQQFRATFDKRRVHSMRDKKAVIAQLMVPVLFVLLAMAVAKSFPPEKDKPFLGFTAASLRADYVDTDGIRSRIVYAQPCGLLAPDVLNGVSAYFSSPNANPYDVYWSGSVSPSVVKVVSSPERTSLVNTLLSTYNELRTKFTSYGALTLNVTSITANATSFAATVWYQNSAYHSAPIYLNALTNTLLRHSNPAMSIATANHPFPASFSSKIDDLNTSGSQFSVAILFVFGMSFMGAYFVNFLVNERASGAKHLQLLAGVSTSAFWFGTLAWDMLNFLLPLFMMYAVIGAFGIDEYTGVNFGAVALLLLFYGFSSACLSYLFSFAFDGATTAYITLAMVNVLLGLGSVIIVWVLDVLDVAQGLNDVLKWIFLIVPTYAMGRGIMDTATQATLSKYRRQTGLSSGDNPLVWGVCGRNIVFMAIFGCVFLFLVFVIEKRWLSLSRLRAQKESRAAMGASTPPSSRDSEDEDVRMERDRVQRSNGEGEVVFVRNLCKTYPARAGQPDKVAVDNVSFGIPANECFGLLGVNGAGKTTTFKMLTGDFPATSGEAYLKGFSVNTELDEVRRRVGYCPQAIDAMIESMTGRELLIMFARIRGIVPADQQRVAGAWISRLQLDRYADLPCGQYSGGNKRKLSVAIGLVGDPPILFLDEPSAGVDAKARRFLWNTITSVVHQGTSVVLTSHSMEECEALCNRLGIMVNGRLMCLGSPQHLKTRFGGGYEVKIKVKCPDEFTRGATHSDHSTGEVLQKVRNSADVVVTIVPVGDATHAEVDTSRLERLIASKFPESRLKEKHNGMVCFDVKGTGVSLAQIFGELEDVRAEFAIEDYSVSQSTLEQVFLGFAKTQGSGSDAAAMVGV* # PASA_UPDATE: g4219.t1, single gene model update, valid-1, status:[pasa:asmbl_6048,status:12], valid-1 NODE_3425_length_3501_cov_37.0984 . gene 1202 3251 . - . ID=g4219;Name=g4219.t1 NODE_3425_length_3501_cov_37.0984 . mRNA 1202 3251 . - . ID=g4219.t1;Parent=g4219;Name=g4219.t1 NODE_3425_length_3501_cov_37.0984 . exon 3108 3251 . - . ID=g4219.t1.exon1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . CDS 3108 3251 . - 0 ID=cds.g4219.t1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . exon 2586 2651 . - . ID=g4219.t1.exon2;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . CDS 2586 2651 . - 0 ID=cds.g4219.t1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . exon 2168 2251 . - . ID=g4219.t1.exon3;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . CDS 2168 2251 . - 0 ID=cds.g4219.t1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . exon 1721 1859 . - . ID=g4219.t1.exon4;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . CDS 1721 1859 . - 0 ID=cds.g4219.t1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . exon 1202 1467 . - . ID=g4219.t1.exon5;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . CDS 1262 1467 . - 2 ID=cds.g4219.t1;Parent=g4219.t1 NODE_3425_length_3501_cov_37.0984 . three_prime_UTR 1202 1261 . - . ID=g4219.t1.utr3p1;Parent=g4219.t1 #PROT g4219.t1 g4219 MLFSHRCDTAIEVSKSICGKCKVPIEGDSIFFQGKTHHPYHFECDTCRTPLNVTCKEYNGKLYCARDYEKALIQVCAACRKPIDGRSVTALDKLWHPEHFVCAKCEQPFSGSNYYEHKGRPYCLPHYRQFQDRCFRCNQQVKGDNVVIFNKTWCGHHLTCGTCDAQLTKSSKFVEVDQRAMCKHCFEKLDSDTRKKIKKYEELEKKLHEKKK* # ORIGINAL: g3368.t1 original gene structure, not modified by PASA NODE_1599_length_10266_cov_42.349 AUGUSTUS gene 7120 9787 . + . ID=g3368;Name=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS mRNA 7120 9787 . + . ID=g3368.t1;Parent=g3368;Name=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 7120 7815 . + . ID=g3368.t1.exon1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 7120 7815 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 8067 8246 . + . ID=g3368.t1.exon2;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 8067 8246 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 8407 8502 . + . ID=g3368.t1.exon3;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 8407 8502 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 8756 8917 . + . ID=g3368.t1.exon4;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 8756 8917 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 9151 9204 . + . ID=g3368.t1.exon5;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 9151 9204 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 9312 9420 . + . ID=g3368.t1.exon6;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 9312 9420 . + 0 ID=cds.g3368.t1;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 9570 9787 . + . ID=g3368.t1.exon7;Parent=g3368.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 9570 9787 . + 2 ID=cds.g3368.t1;Parent=g3368.t1 #PROT g3368.t1 g3368 MEATATATVEAAATTEKHDMIDSITETMHIPRGVRSDLGNITLLVMLYFIQGLPLGFVYGALPILLADRMGLKEQATLTLATIPYSIKLLWSPIVDTLHLPSIGLRKSWIVPTQFAIGGVFFAIGFLGDELLTWSDTALGITFFLVVFLAATQDIAVDGWALSLLSMPNKPYASTCQSIGLEIGTLLSSSVFIALNSADFCNSYIRLSPSSEGLLSVGQMLIGCGFMYMATTDASEDHHGGDVLSVYRQMWDVIRLPAVRRLAVILLISKIGLIAGESVSGFKLFEKGFKQSDMAVRSLIEFPMHLVLGVLVARWTVGRAPLQLWLSMLFVRVLVAFAMMFVVDAFPKSGEMTFLYFQSLLGISLLSSFAMTVMFVAQGAVFAKVSDPAIGGTYITLLNTLSNFGSSWARYPIMVLVDYFSVASCQPKDASIDISYLGDCTEPAGRHLCKDGGGVCVYESDGYHVMSWVCLVLGVAVVLVVSRLIRTINVDRESDWRVVKRAVA* # ORIGINAL: g3367.t1 original gene structure, not modified by PASA NODE_1599_length_10266_cov_42.349 AUGUSTUS gene 179 6329 . - . ID=g3367;Name=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS mRNA 179 6329 . - . ID=g3367.t1;Parent=g3367;Name=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 5950 6329 . - . ID=g3367.t1.exon1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 5950 6329 . - 0 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 5000 5772 . - . ID=g3367.t1.exon2;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 5000 5772 . - 1 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 2988 4312 . - . ID=g3367.t1.exon3;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 2988 4312 . - 2 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 2537 2725 . - . ID=g3367.t1.exon4;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 2537 2725 . - 0 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 2062 2222 . - . ID=g3367.t1.exon5;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 2062 2222 . - 0 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 1588 1753 . - . ID=g3367.t1.exon6;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 1588 1753 . - 1 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 1004 1340 . - . ID=g3367.t1.exon7;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 1004 1340 . - 0 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 607 816 . - . ID=g3367.t1.exon8;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 607 816 . - 2 ID=cds.g3367.t1;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 179 399 . - . ID=g3367.t1.exon9;Parent=g3367.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 179 399 . - 2 ID=cds.g3367.t1;Parent=g3367.t1 #PROT g3367.t1 g3367 MNRNGGKNRQKRDALGRPLPWANKKRGRGRGRGRGGSGRGGGGGDSARDGGVDGPAAGRGGGDARGRGRGTRGGRGAVGGGRGAGRGGRSDGAASGHQSLHHVEMSRANQGMVSDLLVSLGHAPNVGQSAARAAPAPAKGQRPKLALDEDDDGDEDGEDFDENDDETYFEEYIPHSGDEEDGDYEGEEEYDEDGEDDEYDEDEEDGEGGSETLTDTEGEAAGTKKTALDQVDAHVTGTVDGDGFRSDSPWLESFGFPARACQAALESAGDSELAALELLHWHLLEASGVASAWGGGHVGDDVEDLRREEAEALHSIYGDSFVEIDKCHWILHLDDPSHRSPAKKPAVAPDTCRFFLSGKCRFGSECKQSHVLPLATKIASPNKAGGHPRAGFAAIDSGYHRHRLEIYFPSASTYPYEPPIIMYAKESMAALARLELAVRLHTSATALVGGAMVFSLAVHLTDGLSVQFDKMYPRKAPELAEYAFPNIAAVFRRMCEEAPHAVPKRAAIAPPTLDLSKMSLRETSAATGKTVSDAKPASSRNDMQQRPLVATSTNGTVSDDKSVRSGAGRTTDDRTSGAAKSITTPIVSTAVNANNNASQRANTTGGMTSAVVVPRDMSRDSGAVRASGNQTTDSRVSGTARLPSAQTATPPAPTELRAATTGKGAPVFVPPAQTQGRNAHAAKGKAADIRVDSPKNAPPAAMASGSASGLKTAGTSGANSTPGKNASGGAAALSAATPQQTSINSATNLSRGTPKGGSAAGSAKNAASNHTVPAVVASAEIDGEDENSGDEEAPDNFRDLGRWKREKAVARQKADNATALSAAARQDAAVGRRLQDKYADMLRRPRYVEMKAARDKLPAFAMKDAIVKACTDSRVLVICGETGCGKSTQIPQFIFDSFAEKGNASKCNILCTQPRRISAIGLADRVASERAESVGDTVGYQIRLESSMSSSTRILFCTTGILLRRLEGDALLNGVSHVIVDEVHERSIESDFLLMILRDMLTQRTDLRVILMSATVNSGLFSTYFSGAPVMTIPGRTFPVTSMFLEDALESTGHTVSMGSPYARTGGASGSDRRRQKGDGDPKHGGGSGSNDRGGRGQRHGKEEAVPPMDERTRLLMAPDAELDLTELKQRYKGYSDKTVESIAAHDPAKVNHPLIAQLVEKLVLEGAGVVQAAPPQSRGGKKGGKQQQQQPQGQSNTSPQDGAEGGGGILVFLPGIADITAVHELLVTNPRLVAIRQYIVPLHSMLSKCVWG* # ORIGINAL: g3369.t1 original gene structure, not modified by PASA NODE_1599_length_10266_cov_42.349 AUGUSTUS gene 10155 10266 . - . ID=g3369;Name=g3369.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS mRNA 10155 10266 . - . ID=g3369.t1;Parent=g3369;Name=g3369.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS exon 10155 10266 . - . ID=g3369.t1.exon1;Parent=g3369.t1 NODE_1599_length_10266_cov_42.349 AUGUSTUS CDS 10155 10266 . - 1 ID=cds.g3369.t1;Parent=g3369.t1 #PROT g3369.t1 g3369 SNMNDLVSEYQQYQDATAEEEGEVDGEEEEADQEEA* # ORIGINAL: g10204.t1 original gene structure, not modified by PASA NODE_1951_length_8380_cov_42.6931 AUGUSTUS gene 6146 7183 . - . ID=g10204;Name=g10204.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS mRNA 6146 7183 . - . ID=g10204.t1;Parent=g10204;Name=g10204.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 6146 7183 . - . ID=g10204.t1.exon1;Parent=g10204.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 6146 7183 . - 0 ID=cds.g10204.t1;Parent=g10204.t1 #PROT g10204.t1 g10204 MSSDGARARETPPPPAGCGCESPAHDGASAHVHGMMPPPPRGSEDTHGHGHRQKKRGGEEPIDPNKWDEICIGFWRQNFGRRVRGVPGQCIGIQVLMLHNKRVDSDEPAMSDATGVRLVITTGDDDGGAEHYDDIGDSGTKSTDNRVGDKVPVAPPVSVASPNTVIAEDARVTHEAKQQSQQGVDVAPTESTTGNERPRNPFENRPPKPLFPPTLTPSPGDASKDAEDSAQFPPPPSLTREEAQARFERTLAGRLLKKLREESEKPSILTDAHRQEEVAKSLRATWDAQLEFTKKLSNKIVSLDVLTNTTTFVSHTVGSKAREINEWLSRRFGGRSGRPPPPPEP* # ORIGINAL: g10203.t1 original gene structure, not modified by PASA NODE_1951_length_8380_cov_42.6931 AUGUSTUS gene 2533 5920 . + . ID=g10203;Name=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS mRNA 2533 5920 . + . ID=g10203.t1;Parent=g10203;Name=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 2533 3100 . + . ID=g10203.t1.exon1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 2533 3100 . + 0 ID=cds.g10203.t1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 3200 3779 . + . ID=g10203.t1.exon2;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 3200 3779 . + 2 ID=cds.g10203.t1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 3986 4436 . + . ID=g10203.t1.exon3;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 3986 4436 . + 1 ID=cds.g10203.t1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 4599 4903 . + . ID=g10203.t1.exon4;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 4599 4903 . + 0 ID=cds.g10203.t1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 5056 5370 . + . ID=g10203.t1.exon5;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 5056 5370 . + 1 ID=cds.g10203.t1;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS exon 5632 5920 . + . ID=g10203.t1.exon6;Parent=g10203.t1 NODE_1951_length_8380_cov_42.6931 AUGUSTUS CDS 5632 5920 . + 1 ID=cds.g10203.t1;Parent=g10203.t1 #PROT g10203.t1 g10203 MSTEAEVAKLRVQLDGALGEISQLKSQFAAHSDSVAKQIAELKAAVAAGGAQPKGDAKAPAQQANARPASAKPANAKPRPASAPQSRGGSADPSPKVEPAKPSASDPAVGKKSVDAKARPKSAVAPNNKPADKPADKPAALKVDGVGAAAPKERPTSAKPAQGKKDVVSPKVAAAAPGKANPSAGAKPAVYSPTDAIGKPLVTDAPAKKPVIERVHGYRGRDAFNNLHYLHDGRIVYHAAALCIAAEADVEGYGQQTVFQGHTDDITCLAVHPERKVFASGQVCPKGKANRPYIHVWDADTGKVLASLSGRDFHDSGVRCLAFSQLGRLLASVGSDAEHTVTVWDWAEGKLLHQFKGGKEQIHAAAYNPVTNALVTCGKDNLSVWQFDSADGKPQRSKYVFGPVGEAQPLLCIGFTEHGSILTGTAKTGEVYEWIANTVSAVVCGGHDSKAVLSLRTLPGNGLVTAGKDGKICLWREKEGEASAKPRELVRFADVGVDGRGLDVRVRADRAEVEVVVGGTNGAIKHAILSMRPDAAGAERTHVDVRSVTQSHQGEIWGLATLPSGERFATAAYDGEVALWDAQKGTCLVRVSVGDKPRTLAFSKDGALLAVGNEDGRVTVLNGSDLSKLAEKHDRKAIVSAVKFSPDGHTLAVAGHDHHIITYTVGQLPSGAVELTRQHTLTGHSSYVTHFDFSEDGKHLQSASGDYELLFWDAAAGTQVKNASSLRDFKWDTFNSVLGWPVSGIWPPDSDGTDVNSVDRSSDGSLVATGNDDGTVRLFRCPAHTPGKNKMAPAAEGLGHSAHVACVRFLPNNAGLVSAGGNDGTIIVWRLVPRA* # PASA_UPDATE: g10202.t1, single gene model update, valid-1, status:[pasa:asmbl_3097,status:3], valid-1 NODE_1951_length_8380_cov_42.6931 . gene 252 2237 . + . ID=g10202;Name=g10202.t1 NODE_1951_length_8380_cov_42.6931 . mRNA 252 2237 . + . ID=g10202.t1;Parent=g10202;Name=g10202.t1 NODE_1951_length_8380_cov_42.6931 . five_prime_UTR 252 291 . + . ID=g10202.t1.utr5p1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 252 432 . + . ID=g10202.t1.exon1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 292 432 . + 0 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 517 613 . + . ID=g10202.t1.exon2;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 517 613 . + 0 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 739 863 . + . ID=g10202.t1.exon3;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 739 863 . + 2 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 979 1149 . + . ID=g10202.t1.exon4;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 979 1149 . + 0 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 1274 1395 . + . ID=g10202.t1.exon5;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 1274 1395 . + 0 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 1624 1692 . + . ID=g10202.t1.exon6;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 1624 1692 . + 1 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . exon 1796 2237 . + . ID=g10202.t1.exon7;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . CDS 1796 1859 . + 1 ID=cds.g10202.t1;Parent=g10202.t1 NODE_1951_length_8380_cov_42.6931 . three_prime_UTR 1860 2237 . + . ID=g10202.t1.utr3p1;Parent=g10202.t1 #PROT g10202.t1 g10202 MRHRCIPSPQLAMDSRWALAIHGGAGVIPTAHRDPIYLAALADALEKGKAVLESGGSALDAVIASVISLEDCPEFNAGRGSVFNCDGDIEMEASVMEGANLRCGAVTGLRTVKNPVVLARHVMEKTPHVLLGFKSAEELAVSANVERMPVEYFRTELRWQQLAEAKRESIIANDHSIEVPTPPASSSSSHRAKGTVGAVAVDAAGNVAVATSTGGRTNKSHWRHAANREWELCRQCNLRCVWHRQRGRVYTPRCMCGDIARY* # PASA_UPDATE: g10205.t1, single gene model update, valid-1, status:[pasa:asmbl_3098,status:12], valid-1 NODE_1951_length_8380_cov_42.6931 . gene 7548 8380 . + . ID=g10205;Name=g10205.t1 NODE_1951_length_8380_cov_42.6931 . mRNA 7548 8380 . + . ID=g10205.t1;Parent=g10205;Name=g10205.t1 NODE_1951_length_8380_cov_42.6931 . five_prime_UTR 7548 7591 . + . ID=g10205.t1.utr5p1;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . exon 7548 7665 . + . ID=g10205.t1.exon1;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . CDS 7592 7665 . + 0 ID=cds.g10205.t1;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . exon 7871 8087 . + . ID=g10205.t1.exon2;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . CDS 7871 8087 . + 1 ID=cds.g10205.t1;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . exon 8213 8380 . + . ID=g10205.t1.exon3;Parent=g10205.t1 NODE_1951_length_8380_cov_42.6931 . CDS 8213 8380 . + 0 ID=cds.g10205.t1;Parent=g10205.t1;3_prime_partial=true #PROT g10205.t1 g10205 MTDNGSKCTWRVGSTEPSPHPAADRSPPKKILDTALEWIGNTPMVRLSKIAKSAGLECELLAKCEFFNAGGSVKDRIGRQMVEDAEKSGRLKPGDTIIEPTSGNTGIGLALAAAIKGYRVIITLPEKMSQEKVCDYLYLLRVRFATRQLIAPP # PASA_UPDATE: g12784.t1, single gene model update, valid-1, status:[pasa:asmbl_1770,status:3], valid-1 NODE_1496_length_10936_cov_42.8995 . gene 4921 6831 . + . ID=g12784;Name=g12784.t1 NODE_1496_length_10936_cov_42.8995 . mRNA 4921 6831 . + . ID=g12784.t1;Parent=g12784;Name=g12784.t1 NODE_1496_length_10936_cov_42.8995 . five_prime_UTR 4921 5094 . + . ID=g12784.t1.utr5p1;Parent=g12784.t1 NODE_1496_length_10936_cov_42.8995 . exon 4921 5702 . + . ID=g12784.t1.exon1;Parent=g12784.t1 NODE_1496_length_10936_cov_42.8995 . CDS 5095 5702 . + 0 ID=cds.g12784.t1;Parent=g12784.t1 NODE_1496_length_10936_cov_42.8995 . exon 5881 6831 . + . ID=g12784.t1.exon2;Parent=g12784.t1 NODE_1496_length_10936_cov_42.8995 . CDS 5881 6457 . + 1 ID=cds.g12784.t1;Parent=g12784.t1 NODE_1496_length_10936_cov_42.8995 . three_prime_UTR 6458 6831 . + . ID=g12784.t1.utr3p1;Parent=g12784.t1 #PROT g12784.t1 g12784 MSGPSVILPPEWQRTNKRVLTQAQTDMQESARLRQEAETLRNAIAHRIASATAEVDRSIGRRINEVLDKRTALEQSSKATTTEVAALDAIKLRLEQALVAKKHPLEVAHQCLENRTGRLTIDKVRDSVEIELEVEIDVVKSAAAIINQKLGEAIDRLRALKAARYELDHDSNNKGRTLEIDNACATSDKTLRTVSKLITIDPSPVQPPTYENFTERNLGIAEQERAYSSILRDVANDVLAMTARNVHKQREVVNQAFVERIAQVLHAKESLEESLRENAAEISSLENSIEELKIAIQEKEFPMAVATGRLNRRVNRNGVELVHDHVEINLTGEVALIERSIKELKASLAQAERDLLALRRTKLTLEEDIHVKTVSLSLDNKCVELRRSLLDQTF* # ORIGINAL: g12785.t1 original gene structure, not modified by PASA NODE_1496_length_10936_cov_42.8995 AUGUSTUS gene 7235 9115 . - . ID=g12785;Name=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS mRNA 7235 9115 . - . ID=g12785.t1;Parent=g12785;Name=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 8817 9115 . - . ID=g12785.t1.exon1;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 8817 9115 . - 0 ID=cds.g12785.t1;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 8615 8736 . - . ID=g12785.t1.exon2;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 8615 8736 . - 1 ID=cds.g12785.t1;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 8334 8482 . - . ID=g12785.t1.exon3;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 8334 8482 . - 2 ID=cds.g12785.t1;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 7235 8176 . - . ID=g12785.t1.exon4;Parent=g12785.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 7235 8176 . - 0 ID=cds.g12785.t1;Parent=g12785.t1 #PROT g12785.t1 g12785 MALAMLRVGHAVRASSACAFAAAPGALFHSSTQSLFPRKPLRVSVDAELPPPPLNKPPGTPKRERVQGKGEAHRMERADDIGDVPDRKLFSKQYSSSMQRWAAFSLRSVRERPQSASVSAPTNVESPPAERTGGEPDADQVPPEVARHRKGRTLWKERTLSLRDRGIVNWNPQRRLSREQMEHMRFLRREYPDQFPVQKLATSFHVSIEACIRILKSRWEPPEDVVARQAERKVPQLVASRARYIERIKTLIRDREKAARTPGGWKHDGDGDGDATGSKKEQFAIKYGARGEKLRRILAEDDAVNSPIEKPSGGGEGVAERKQAIQSVRVGGNRSTTRGDASTGGLSPSFGFKRSAVEGDGESRGNDAGDAHAPTHFRPDAAPSRTHGHRVTRAGPPSRLDDVLEDVQRSPPHHRSREVSFETLTAGVPVQSGGVDKRQERRKSEGGARGASGPSGAKGGESQFSQIAFASDSDMSTGLVGVSEEDTMSREQRRRLARERKEL* # ORIGINAL: g12786.t1 original gene structure, not modified by PASA NODE_1496_length_10936_cov_42.8995 AUGUSTUS gene 9640 10588 . + . ID=g12786;Name=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS mRNA 9640 10588 . + . ID=g12786.t1;Parent=g12786;Name=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 9640 9745 . + . ID=g12786.t1.exon1;Parent=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 9640 9745 . + 0 ID=cds.g12786.t1;Parent=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 9953 10152 . + . ID=g12786.t1.exon2;Parent=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 9953 10152 . + 2 ID=cds.g12786.t1;Parent=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 10400 10588 . + . ID=g12786.t1.exon3;Parent=g12786.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 10400 10588 . + 0 ID=cds.g12786.t1;Parent=g12786.t1 #PROT g12786.t1 g12786 MVVDVNAVLAAAKVEADEKRKLVEVHREEKLNVDSGNLVGYDFRPLDPSSLKKNPQEYLRSLARDNTQLLINEIWKLPTERVEEAVIAKLPRGSTPLPREKPLPKPKEPTRWEKFAALKGITKTKRSRMTYDEAHDDFKPRYGYKRANDDQSAWVLEVPQNGGA* # PASA_UPDATE: g12783.t1, single gene model update, valid-1, status:[pasa:asmbl_1769,status:12], valid-1 NODE_1496_length_10936_cov_42.8995 . gene 4109 4698 . + . ID=g12783;Name=g12783.t1 NODE_1496_length_10936_cov_42.8995 . mRNA 4109 4698 . + . ID=g12783.t1;Parent=g12783;Name=g12783.t1 NODE_1496_length_10936_cov_42.8995 . five_prime_UTR 4109 4119 . + . ID=g12783.t1.utr5p1;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . exon 4109 4341 . + . ID=g12783.t1.exon1;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . CDS 4120 4341 . + 0 ID=cds.g12783.t1;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . exon 4440 4502 . + . ID=g12783.t1.exon2;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . CDS 4440 4502 . + 0 ID=cds.g12783.t1;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . exon 4585 4698 . + . ID=g12783.t1.exon3;Parent=g12783.t1 NODE_1496_length_10936_cov_42.8995 . CDS 4585 4698 . + 0 ID=cds.g12783.t1;Parent=g12783.t1 #PROT g12783.t1 g12783 MNALLLNALLLNVSNSPWHINLYPAMLASKWARWRQQPFVVYGIPMISLIVLSSFGLSEFTKVKFDRRDKQITKISEEEVRKLATRKVDVHEEFQKISQMDIDNWEQIRGPHIEEILPKLKEQKLAASAVKK* # ORIGINAL: g12782.t1 original gene structure, not modified by PASA NODE_1496_length_10936_cov_42.8995 AUGUSTUS gene 162 3364 . - . ID=g12782;Name=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS mRNA 162 3364 . - . ID=g12782.t1;Parent=g12782;Name=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 3265 3364 . - . ID=g12782.t1.exon1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 3265 3364 . - 0 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 2989 3130 . - . ID=g12782.t1.exon2;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 2989 3130 . - 2 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 2679 2839 . - . ID=g12782.t1.exon3;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 2679 2839 . - 1 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 2075 2455 . - . ID=g12782.t1.exon4;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 2075 2455 . - 2 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 1643 1773 . - . ID=g12782.t1.exon5;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 1643 1773 . - 2 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 1282 1429 . - . ID=g12782.t1.exon6;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 1282 1429 . - 0 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 547 894 . - . ID=g12782.t1.exon7;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 547 894 . - 2 ID=cds.g12782.t1;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS exon 162 409 . - . ID=g12782.t1.exon8;Parent=g12782.t1 NODE_1496_length_10936_cov_42.8995 AUGUSTUS CDS 162 409 . - 2 ID=cds.g12782.t1;Parent=g12782.t1 #PROT g12782.t1 g12782 MARGLLIFALVAASHVAIAFAETTNWDAIPQWQVCNSFDKARIEVRYRDLKGGFPSALGGTTKRHPDIEMPFDPPGGMGGWVNSGPYGENCWGDKPRGCVTCASTETACSYTSNDGVIQGMVEKTLGADLKPVYRNNVAAGDKPGKKSIRSNESFWVWYHETAGSNKLDTLTTDPFGNYFVQSSLTLERVKFTSTFRFSSSAFFPLNGLGFQEKGTSNNNNNNFGFTTEIHVSFIYNPENSVFQFSGDDDFWLFLGDRLVIDLGGLHWPTCRRIDLRNSVVIPTGGLTFANGSCPDTPIPGETFTHSLQYGDEQTMHIFHAERHQDNSNFMMETTIQRFGKSKSSSAGSSNIMSEMQFVNTSDTIYPGLPFTASLALNFPPSQAGDITCYLSDDFSANATVIAKAANFSSCPSASDLSKTLKLDMASAAKEGRKYTMGGASFSNGTLTCAIDTVWYSNFYGVSATLDVNIDVGILYEGRHVSTPTATFAGIKSSFEAGTAIGAGCKRMMDSLNDFSVRQVCNNGDNVADGVGQRITIALFEPVGGVSWAFELN # PASA_UPDATE: g6013.t1, single gene model update, valid-1, status:[pasa:asmbl_3556,status:3], valid-1 NODE_2116_length_7661_cov_39.6554 . gene 1173 4959 . + . ID=g6013;Name=g6013.t1 NODE_2116_length_7661_cov_39.6554 . mRNA 1173 4959 . + . ID=g6013.t1;Parent=g6013;Name=g6013.t1 NODE_2116_length_7661_cov_39.6554 . five_prime_UTR 1173 1398 . + . ID=g6013.t1.utr5p1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 1173 1651 . + . ID=g6013.t1.exon1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 1399 1651 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 1738 1778 . + . ID=g6013.t1.exon2;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 1738 1778 . + 2 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 1986 2055 . + . ID=g6013.t1.exon3;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 1986 2055 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 2282 2430 . + . ID=g6013.t1.exon4;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 2282 2430 . + 2 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 2672 2906 . + . ID=g6013.t1.exon5;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 2672 2906 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 3089 3259 . + . ID=g6013.t1.exon6;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 3089 3259 . + 2 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 3393 3538 . + . ID=g6013.t1.exon7;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 3393 3538 . + 2 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 3669 3749 . + . ID=g6013.t1.exon8;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 3669 3749 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 4118 4189 . + . ID=g6013.t1.exon9;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 4118 4189 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . exon 4332 4959 . + . ID=g6013.t1.exon10;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . CDS 4332 4571 . + 0 ID=cds.g6013.t1;Parent=g6013.t1 NODE_2116_length_7661_cov_39.6554 . three_prime_UTR 4572 4959 . + . ID=g6013.t1.utr3p1;Parent=g6013.t1 #PROT g6013.t1 g6013 MATKQASAGASLTATGAQSAPSSAQLRPDGAGAAGQERSKSRSSSRASSNSRSAASLSNCVLMVGPNFRVGKKIGSGNFGEIHIGKNLYNNEDVAVKMESMKSRAPQLHLEYKFYKALSGEFGFPNVYYYGPAGKYNAMVVDLLGPSLEDLFDMCHRKFTLKTVLMVALQLTTRMETIHNKCLIYRDVKPENFLIGLKEKDSHKIVHIIDFGLAKEYIDPNTGEHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMYMYFLRGSLPWQGLKADTLKERYQKIGETKIATPIEVLCENHPEEFAKYLRYTRSLEFSQKPDYNYIRQLFSDLFRKEGYVDDGVYDWSHLKIQSAASTSSTLQAPKEANAKSIDPSKDARLTAASRGKGSRPSGLNVPENKMGVSQDSVASPQAARSSAGQWSNQKESGADTNRLTEAPRDANAGGAKGNVVEVVDETSCCFLFRRTKTRPAKAASARSGK* # PASA_UPDATE: g6012.t1, single gene model update, valid-1, status:[pasa:asmbl_3555,status:12], valid-1 NODE_2116_length_7661_cov_39.6554 . gene 409 824 . + . ID=g6012;Name=g6012.t1 NODE_2116_length_7661_cov_39.6554 . mRNA 409 824 . + . ID=g6012.t1;Parent=g6012;Name=g6012.t1 NODE_2116_length_7661_cov_39.6554 . five_prime_UTR 409 409 . + . ID=g6012.t1.utr5p1;Parent=g6012.t1 NODE_2116_length_7661_cov_39.6554 . exon 409 480 . + . ID=g6012.t1.exon1;Parent=g6012.t1 NODE_2116_length_7661_cov_39.6554 . CDS 410 480 . + 0 ID=cds.g6012.t1;Parent=g6012.t1;5_prime_partial=true NODE_2116_length_7661_cov_39.6554 . exon 605 824 . + . ID=g6012.t1.exon2;Parent=g6012.t1 NODE_2116_length_7661_cov_39.6554 . CDS 605 761 . + 1 ID=cds.g6012.t1;Parent=g6012.t1 NODE_2116_length_7661_cov_39.6554 . three_prime_UTR 762 824 . + . ID=g6012.t1.utr3p1;Parent=g6012.t1 #PROT g6012.t1 g6012 LLREEIMQGRIAIIPLLQAEADRKYVNDKRRLVAEEAELMKDVKGWVPGASVYHSDRFVAPYHTPTPGEWASFAA* # PASA_UPDATE: g6014.t1, single gene model update, valid-1, status:[pasa:asmbl_3557,status:3], valid-1 NODE_2116_length_7661_cov_39.6554 . gene 5220 6917 . + . ID=g6014;Name=g6014.t1 NODE_2116_length_7661_cov_39.6554 . mRNA 5220 6917 . + . ID=g6014.t1;Parent=g6014;Name=g6014.t1 NODE_2116_length_7661_cov_39.6554 . five_prime_UTR 5220 5314 . + . ID=g6014.t1.utr5p1;Parent=g6014.t1 NODE_2116_length_7661_cov_39.6554 . exon 5220 6331 . + . ID=g6014.t1.exon1;Parent=g6014.t1 NODE_2116_length_7661_cov_39.6554 . CDS 5315 6331 . + 0 ID=cds.g6014.t1;Parent=g6014.t1 NODE_2116_length_7661_cov_39.6554 . exon 6430 6917 . + . ID=g6014.t1.exon2;Parent=g6014.t1 NODE_2116_length_7661_cov_39.6554 . CDS 6430 6855 . + 0 ID=cds.g6014.t1;Parent=g6014.t1 NODE_2116_length_7661_cov_39.6554 . three_prime_UTR 6856 6917 . + . ID=g6014.t1.utr3p1;Parent=g6014.t1 #PROT g6014.t1 g6014 MATGGDHNRNAAEYGLTRLIAPRNTSTATASSHFVLGTDTSSPHPAFQTTMSADYVPLQPPQRGIHGPSHRSTDHAHGDRSKVNDLVSVTELSYKPHSSYARTVVGSGNETALRSTHFQMHSDARFASFETTNSQYYAPIDLSARDHRASNLHASSIPQGDREKCGAQGTTSRDAFTGHPGAAPTVHAQRPADARGVTDSRFGVSDRFITSSVSAFGDVATAVEAARSRRAPLAPRRDTGVVHGDAERFGIQVSVTEDSFRPPAGGLQMAQPADHLRRSHVRLTANRHDWPLSTANEAYAAPAAHVTEFVHRPFNESFVPTGDVRATAVSATTANSSYGAPEGHVRTHPIDRRSDGIVFGRPSEGAAYETTAQTSFGAYAGARPDRTRTHRKTAIAYGELDGSHNSTTTASDFRRPIGGRRPPLGDGNMDRLCGTHFDFGRDTHFKYYSTTTADAFTPYGHVERVQPVNPALQTHSHSHQ* # PASA_UPDATE: g8976.t1, single gene model update, valid-1, status:[pasa:asmbl_9872,status:3], valid-1 NODE_895_length_16116_cov_51.057 . gene 4661 8224 . + . ID=g8976;Name=g8976.t1 NODE_895_length_16116_cov_51.057 . mRNA 4661 8224 . + . ID=g8976.t1;Parent=g8976;Name=g8976.t1 NODE_895_length_16116_cov_51.057 . five_prime_UTR 4661 4816 . + . ID=g8976.t1.utr5p1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 4661 4855 . + . ID=g8976.t1.exon1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 4817 4855 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 4941 5010 . + . ID=g8976.t1.exon2;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 4941 5010 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 5197 5294 . + . ID=g8976.t1.exon3;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 5197 5294 . + 2 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 5494 5583 . + . ID=g8976.t1.exon4;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 5494 5583 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 5898 6034 . + . ID=g8976.t1.exon5;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 5898 6034 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 6267 6362 . + . ID=g8976.t1.exon6;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 6267 6362 . + 1 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 6554 6698 . + . ID=g8976.t1.exon7;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 6554 6698 . + 1 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 6957 7136 . + . ID=g8976.t1.exon8;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 6957 7136 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 7354 7596 . + . ID=g8976.t1.exon9;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 7354 7596 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . exon 7828 8224 . + . ID=g8976.t1.exon10;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . CDS 7828 8064 . + 0 ID=cds.g8976.t1;Parent=g8976.t1 NODE_895_length_16116_cov_51.057 . three_prime_UTR 8065 8224 . + . ID=g8976.t1.utr3p1;Parent=g8976.t1 #PROT g8976.t1 g8976 MSDKHVIIIGGGLVGALEAIFMSRRGYAVDLYELRHDIRKEAQYSGRSINLALSTRGLAALKHVGLDEKVTENAIPMHSRMIHSPEGNQNPIPYGRPGQAILSVDRRRLNEILLDAAEKFPNVRLHFGHKLTSIDHVAGNATFAKEDGSSVTVHGSFIVGCDGAYSAVRNHMQKTTRFNYKQEYITHGYKELHIPATDKGEYALPINYLHIWPRHTFMMIALPNPDKSFTCTLFMPFENFGQVTTPEQILGFFEENFADAIPLIGKDRLIADYTHNPTSSLVLVKCFPYNINDKVLIVGDAAHAMVPFYGQGMNCGFEDLLVLDEILDETNDDLMAALPEYSCRRNPDAEAILDLALANYVEMRHKVASRAFLIRKKVDGVLNRIFPRTFIPLYSMVTFSRIPYAEVIRRAERQDALVTAGAVVAVGATVAAVGALLFRRFASR* # ORIGINAL: g8978.t1 original gene structure, not modified by PASA NODE_895_length_16116_cov_51.057 AUGUSTUS gene 10754 14729 . + . ID=g8978;Name=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS mRNA 10754 14729 . + . ID=g8978.t1;Parent=g8978;Name=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 10754 10794 . + . ID=g8978.t1.exon1;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 10754 10794 . + 0 ID=cds.g8978.t1;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 11009 11126 . + . ID=g8978.t1.exon2;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 11009 11126 . + 1 ID=cds.g8978.t1;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 11463 11540 . + . ID=g8978.t1.exon3;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 11463 11540 . + 0 ID=cds.g8978.t1;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 11750 13493 . + . ID=g8978.t1.exon4;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 11750 13493 . + 0 ID=cds.g8978.t1;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 13762 14729 . + . ID=g8978.t1.exon5;Parent=g8978.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 13762 14729 . + 2 ID=cds.g8978.t1;Parent=g8978.t1 #PROT g8978.t1 g8978 MGGEEVVVAHGISRHAIQLEGADNVEVFKFQVFSVTGVEPDAQHYREIDLAGKDELSLEAAGIKPGLCLTLVSAQDAFKAQPSTVSAPAANQRPPTRDNRWQQCCTRVYFACDDAVQPSFSADGVEGHVCAACASTCRLPNTVRFDASPRTAGFVCACLPEACLFGPRLGTEMLPPGDALSAAMLEDMRLTTAAMCASAFAEGKRQFGARLQSGVATVLEYERQDLRARARGVIPLAELEKRAAAVADPLPGRDEYLMQLMRWYKNEFFAWVNSPPCDRCASTQTSACGGTAPTAEESAFKAGVVELHRCGSCGHVTRFPRYNDTGKLIETRRGRCGEWANAFGLLCRACGFEVRHVMDWTDHVWVEVYSHARRRWLHCDPCETALDTPLMYECGWGKKLTYVVAFSRDGVVDVTRRYTQVYGDVLARRRACPEEWLSEETTRLTRMLRSSLSADARAALERRDADELEAFAAAGAKVPSGVELLGRSSGSVAWRLARGELGTSTVGGIPSSPGIESSASPPVASAACTRPSREDAFASTTTALRLCAIAEQDGGAEQPPLLLEYEFCANGKGEEEWRRTARVCGHVTRGNSRLVVRAPLQHGGARDCGLFVLADGMLSPADKGASADGGVRLCNPGDNESVVDAAWCDGGSVLYALLASGAIRVIDVATGSQLASISLASEDVNEKELQIIRGRIVCCGLREGLHRLFVTVEGNATVRQFISRPLTTRDHVATRAFEDAGVGTAGLRLVKPTGMAVARVAGYPRRLLLVCDESQHVVVAFEIADDANNVPSSAKYVATVACGPKVVAPNSVAVIECERDTASAPEAANGDPSLCIRVAVAVACTDSLILARTTFGGRGKGESAPHSIFVADRAKGLSHIVCASNYGAHAEAAKNVPSTRASSAFLASLEPTDRLRRLVRVFFHQLTQGCSRDVCSSEHCKTNPTCDVPATPNDAAARAISLATSATAIDTVCAGIDVMRIA* # ORIGINAL: g8975.t1 original gene structure, not modified by PASA NODE_895_length_16116_cov_51.057 AUGUSTUS gene 1097 4230 . - . ID=g8975;Name=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS mRNA 1097 4230 . - . ID=g8975.t1;Parent=g8975;Name=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 4180 4230 . - . ID=g8975.t1.exon1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 4180 4230 . - 0 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 3937 3982 . - . ID=g8975.t1.exon2;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 3937 3982 . - 0 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 3591 3705 . - . ID=g8975.t1.exon3;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 3591 3705 . - 2 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 3387 3421 . - . ID=g8975.t1.exon4;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 3387 3421 . - 1 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 2883 2955 . - . ID=g8975.t1.exon5;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 2883 2955 . - 2 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 2338 2411 . - . ID=g8975.t1.exon6;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 2338 2411 . - 1 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 1638 2135 . - . ID=g8975.t1.exon7;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 1638 2135 . - 2 ID=cds.g8975.t1;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 1097 1365 . - . ID=g8975.t1.exon8;Parent=g8975.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 1097 1365 . - 2 ID=cds.g8975.t1;Parent=g8975.t1 #PROT g8975.t1 g8975 MSFSFDSVSVDVITRIKEDVRDRLVELDLYTGDDMLLDYVIVMLTNEKTKAQMEEDLRAFLGDETDHFVDWLWKHIDNALEEAGVANMRPSPVLSSVATVPSTAAKSSRRSSQSKRLIMKAVKDATAPTAGGGSSSDGRSSTDPKQSQQAKAVPSMVPMGLPGAPGMPIPGMAMPGMPFPGMMMPPFMNPLMMGALADPTNFARMSEDDRRTLQGTYMAQMLAMQQRMMGLPAPQLMMPLAAGIGNGGVKRKRNILDRLGEVGATPRDRRDGERDRRNNGRRSDKASKDERMAQLSRRLGRPVAAASNGTDGDESGDAGVLSDRAEGRGLNKRQKTADDSEQEVTLNMSSLDSMDVARPAPRERCQYWPNCLNPACTFVHPSEPCR* # ORIGINAL: g8977.t1 original gene structure, not modified by PASA NODE_895_length_16116_cov_51.057 AUGUSTUS gene 8912 9344 . - . ID=g8977;Name=g8977.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS mRNA 8912 9344 . - . ID=g8977.t1;Parent=g8977;Name=g8977.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 9163 9344 . - . ID=g8977.t1.exon1;Parent=g8977.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 9163 9344 . - 0 ID=cds.g8977.t1;Parent=g8977.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS exon 8912 9017 . - . ID=g8977.t1.exon2;Parent=g8977.t1 NODE_895_length_16116_cov_51.057 AUGUSTUS CDS 8912 9017 . - 1 ID=cds.g8977.t1;Parent=g8977.t1 #PROT g8977.t1 g8977 MSSGKEQSLDVQGLPNNQCDKKPVPKSGVGLSNMPGSIHQQHQRDNDENFATVERLKGDDRNRTDRAAGAVHVHKTELPAALRQDDVTAERKQRA* # ORIGINAL: g2935.t1 original gene structure, not modified by PASA NODE_5910_length_683_cov_58.903_potentialcontaminant AUGUSTUS gene 8 471 . - . ID=g2935;Name=g2935.t1 NODE_5910_length_683_cov_58.903_potentialcontaminant AUGUSTUS mRNA 8 471 . - . ID=g2935.t1;Parent=g2935;Name=g2935.t1 NODE_5910_length_683_cov_58.903_potentialcontaminant AUGUSTUS exon 8 471 . - . ID=g2935.t1.exon1;Parent=g2935.t1 NODE_5910_length_683_cov_58.903_potentialcontaminant AUGUSTUS CDS 8 471 . - 0 ID=cds.g2935.t1;Parent=g2935.t1 #PROT g2935.t1 g2935 MNSAANGTTSAGSTNDTLSYLEYYANEPFTAFVSTGAIDLTIVLLALIVASGHYVVGLEYTLLVVKAGLIISNELSRILKDITIQAALEPSHDKFAVLDRKLNIAQAYAHFHSVLQEKLLKKTRVRTLVIIALLLSTTITCVTGLSTAAGLRWQ # PASA_UPDATE: g11555.t1, single gene model update, valid-1, status:[pasa:asmbl_6067,status:12], valid-1 NODE_343_length_26410_cov_44.0735 . gene 15742 17798 . + . ID=g11555;Name=g11555.t1 NODE_343_length_26410_cov_44.0735 . mRNA 15742 17798 . + . ID=g11555.t1;Parent=g11555;Name=g11555.t1 NODE_343_length_26410_cov_44.0735 . five_prime_UTR 15742 15752 . + . ID=g11555.t1.utr5p1;Parent=g11555.t1 NODE_343_length_26410_cov_44.0735 . exon 15742 17798 . + . ID=g11555.t1.exon1;Parent=g11555.t1 NODE_343_length_26410_cov_44.0735 . CDS 15753 17723 . + 0 ID=cds.g11555.t1;Parent=g11555.t1 NODE_343_length_26410_cov_44.0735 . three_prime_UTR 17724 17798 . + . ID=g11555.t1.utr3p1;Parent=g11555.t1 #PROT g11555.t1 g11555 MLGLGSHSPVIAVWFSFFLLPDYILSQAFKMSALDLDAYRKHVALDEPYRTAPDASRSVSESLDIALSHLLIAHDIVDEEQIMSRPYGERRTLLRELLTTWHPSKGSLPDHVISAVDVVLQSELAARHVTDASLLQRVPETFGGAVHASSSRKRDLDGVFSKIALWRGDITSLKVDVIVNAANSALLGCFQPSHKCIDNVIHAAAGPRLRRDCNTIMETLNRAEPVGSAKVTRAYNLPSRFVVHTVGPATRNTDANGKVLVSRKEENQLASSYVSSLELASLLPGVSSIAFCCISTGLFGFPKDRASQIAVATVADWLETHPDSPIKLVVFNVFTDEDLEYYEDVFASIYTQLGSQISPIASDFFSHSAEDRIGKAIDTAASWLRDADCILVAAGAGMSAAAGLDYNDEALFKRLFPAMHRRGHRCMYEFIGFTNWTEKLRWGYLFSQIELARFKWPLHPAYGRLLDIVRRIAPDNHFVMTSNVDGMFERNGFDASRIYTRQGDYARLQCLQRCTEEVWPIKPYMDRALPTIDPKTQEITDPDAVPRCPNCGGAVVMNVRGGDWFIEHPYHAQYAAFQEFIASTKGKRLVVVEVGAGFNTPSVIRWPCEQIVARNPDARLVRINDLHPDFARELGSHAVGITGNAADAIVAIADSV* # ORIGINAL: g11553.t1 original gene structure, not modified by PASA NODE_343_length_26410_cov_44.0735 AUGUSTUS gene 166 868 . + . ID=g11553;Name=g11553.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS mRNA 166 868 . + . ID=g11553.t1;Parent=g11553;Name=g11553.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS exon 166 308 . + . ID=g11553.t1.exon1;Parent=g11553.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS CDS 166 308 . + 2 ID=cds.g11553.t1;Parent=g11553.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS exon 704 868 . + . ID=g11553.t1.exon2;Parent=g11553.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS CDS 704 868 . + 0 ID=cds.g11553.t1;Parent=g11553.t1 #PROT g11553.t1 g11553 LDTDKAEGWFEALTAESTGKKDYRRGPYFDFVGWAEITRLLLLLYMQPTQLATKPEYAQIMEKYAVGSYDPSDSSGVSMIVPTHAFIRSDVFILLQSVVVR* # PASA_UPDATE: g11557.t1, single gene model update, valid-1, status:[pasa:asmbl_6073,status:3], valid-1 NODE_343_length_26410_cov_44.0735 . gene 23351 25226 . - . ID=g11557;Name=g11557.t1 NODE_343_length_26410_cov_44.0735 . mRNA 23351 25226 . - . ID=g11557.t1;Parent=g11557;Name=g11557.t1 NODE_343_length_26410_cov_44.0735 . five_prime_UTR 25078 25226 . - . ID=g11557.t1.utr5p1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . exon 24705 25226 . - . ID=g11557.t1.exon1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . CDS 24705 25077 . - 0 ID=cds.g11557.t1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . exon 24429 24550 . - . ID=g11557.t1.exon2;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . CDS 24429 24550 . - 2 ID=cds.g11557.t1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . exon 24081 24206 . - . ID=g11557.t1.exon3;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . CDS 24081 24206 . - 0 ID=cds.g11557.t1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . exon 23351 23884 . - . ID=g11557.t1.exon4;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . CDS 23429 23884 . - 0 ID=cds.g11557.t1;Parent=g11557.t1 NODE_343_length_26410_cov_44.0735 . three_prime_UTR 23351 23428 . - . ID=g11557.t1.utr3p1;Parent=g11557.t1 #PROT g11557.t1 g11557 MAPSASQASRRKGAARNVQERSSPAAVRNSGTHQRRTSVLPLTVILVLTVAIVSAVGVYVYNKENSLGTEDTPGTLTDINRKSASEESTRCASLLGNATLASAKDSAAVRCEVDCRVDPSDFVEGCTPLSTCARVVLDGLVTPPETDILVKIAERGMGFGGGAGGPTIFDLNSGTLSKGRKFVNLYAAHPIHTLFTADELKVYGDVMLRIKAAASREFGLSSDDALHLTGPTFFSRISNGSALTPNDEYWHNHVDKETYGSFAYTSLLYLNDYGADFEGGRFLFSDDPASDSDRNTQEGEVGGPERTLAVEPRKGRVSLFTSGAENVHRVERVTAGTRYALTIAFTCDSTRAILAPSI* # PASA_UPDATE: g11556.t1, single gene model update, valid-1, status:[pasa:asmbl_6071,status:3], valid-1 NODE_343_length_26410_cov_44.0735 . gene 18236 23014 . - . ID=g11556;Name=g11556.t1 NODE_343_length_26410_cov_44.0735 . mRNA 18236 23014 . - . ID=g11556.t1;Parent=g11556;Name=g11556.t1 NODE_343_length_26410_cov_44.0735 . five_prime_UTR 22947 23014 . - . ID=g11556.t1.utr5p1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 22861 23014 . - . ID=g11556.t1.exon1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 22861 22946 . - 0 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 22464 22553 . - . ID=g11556.t1.exon2;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 22464 22553 . - 1 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 22106 22226 . - . ID=g11556.t1.exon3;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 22106 22226 . - 1 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 21503 21699 . - . ID=g11556.t1.exon4;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 21503 21699 . - 0 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 21199 21289 . - . ID=g11556.t1.exon5;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 21199 21289 . - 1 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 20717 20858 . - . ID=g11556.t1.exon6;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 20717 20858 . - 0 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 20441 20510 . - . ID=g11556.t1.exon7;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 20441 20510 . - 2 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 20176 20222 . - . ID=g11556.t1.exon8;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 20176 20222 . - 1 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 19825 19950 . - . ID=g11556.t1.exon9;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 19825 19950 . - 2 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 19509 19602 . - . ID=g11556.t1.exon10;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 19509 19602 . - 2 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 18956 19274 . - . ID=g11556.t1.exon11;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 18956 19274 . - 1 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . exon 18236 18706 . - . ID=g11556.t1.exon12;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . CDS 18461 18706 . - 0 ID=cds.g11556.t1;Parent=g11556.t1 NODE_343_length_26410_cov_44.0735 . three_prime_UTR 18236 18460 . - . ID=g11556.t1.utr3p1;Parent=g11556.t1 #PROT g11556.t1 g11556 MASIMRVIAACALLSAAVVASAGPFTPEWASLDTRACPDWYDDAKFGIFIHWGVYSVPAWSPVGEYAEWYWHSLATEEATQAFHNRTYGPGFKYTEFADMFKAELFDADAWADLFQRSGAKYIVPTSKHHEGFTLWPSAQSWNWNAVDVGPKRDLLKEIMSAVRSKGLHAGMYFSLYEWFHPLYIGPKPSQYVDQVMLPQLYDLVNNYQPDVLWTDGQWEHNATFWHSEEFLAWLFNESPVKDTIVINDRWGSETPGVHGGFYTPEYSSTVYSDHKWEENSGIDVHSFGLNRNTPADKYSTATDIIALVVRSVCFGGNLLLDIGPAADGTIPPVMAERLLQVGDWLRVNGEAIYATRTWKVQQEYFAPNPKAFVGRTKGRSNVFAGVPTPGSSAGSVVFLGSAADTASCESLCAASAKCLSYTWHDATTGAWANMCYARTDNLWALTADAGHSSGKKRFYTVSYTAAKTGNDVFAIVDIWRRESIVLPSVTMTQDGTVEMLGVDGALEWSNTPNGLVVRMPQISFDEMPCQSAWAFRLTGTA* # ORIGINAL: g11558.t1 original gene structure, not modified by PASA NODE_343_length_26410_cov_44.0735 AUGUSTUS gene 25533 26167 . + . ID=g11558;Name=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS mRNA 25533 26167 . + . ID=g11558.t1;Parent=g11558;Name=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS exon 25533 25581 . + . ID=g11558.t1.exon1;Parent=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS CDS 25533 25581 . + 0 ID=cds.g11558.t1;Parent=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS exon 25817 25887 . + . ID=g11558.t1.exon2;Parent=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS CDS 25817 25887 . + 2 ID=cds.g11558.t1;Parent=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS exon 26057 26167 . + . ID=g11558.t1.exon3;Parent=g11558.t1 NODE_343_length_26410_cov_44.0735 AUGUSTUS CDS 26057 26167 . + 0 ID=cds.g11558.t1;Parent=g11558.t1 #PROT g11558.t1 g11558 MSSTNVFQHVGPTRERDQEDTGMALHATSSNDPKVRRLLQNTIVWINSLLAGDKIVVRDLSEDLHDGAIFISLIGG* # PASA_UPDATE: g11554.t1, single gene model update, valid-1, status:[pasa:asmbl_6070,status:12], valid-1 NODE_343_length_26410_cov_44.0735 . gene 3086 13331 . - . ID=g11554;Name=g11554.t1 NODE_343_length_26410_cov_44.0735 . mRNA 3086 13331 . - . ID=g11554.t1;Parent=g11554;Name=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 6261 13331 . - . ID=g11554.t1.exon1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 6261 13331 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 5997 6092 . - . ID=g11554.t1.exon2;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 5997 6092 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 5434 5718 . - . ID=g11554.t1.exon3;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 5434 5718 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 5041 5100 . - . ID=g11554.t1.exon4;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 5041 5100 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 4845 4905 . - . ID=g11554.t1.exon5;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 4845 4905 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 4574 4642 . - . ID=g11554.t1.exon6;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 4574 4642 . - 2 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 4293 4342 . - . ID=g11554.t1.exon7;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 4293 4342 . - 2 ID=cds.g11554.t1;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . exon 3086 3877 . - . ID=g11554.t1.exon8;Parent=g11554.t1 NODE_343_length_26410_cov_44.0735 . CDS 3086 3877 . - 0 ID=cds.g11554.t1;Parent=g11554.t1 #PROT g11554.t1 g11554 MAQQSTAERVAANRDVVQRLLAGVMPESQRPSLQNEMHTDNDHESHSIHLRAPLGIQRAARVASESPASLRQPTLSFNDALRAAEDSMLQGDKVVAVMLDADSTYVWALSSTEDASQMPSFTIASGVTFSIRRSPPSASEIGTGKFPVVTCINGVGVAHLRAISILPRFEVHRGGTFEIAGVAFVDCDGVLVDVGDGGGLSVSECKFSVSNCRVPEPMFNISGVATFTQSAFTCGRDGSADHERRSDEEEQLRIVRAVESGPDVPPDARGRREVSGVGADGTAAALIGAHGMARVRVDSCQMEGWALLSAEGEADAVVAASSLTACSGVCFRIASDATVSVTNNTRISAVEVADIREAGWLTITASEMASVSVRSSNESDVTQSCEAFRTLNHGQLAMFGSTLSLSGCRALVSRDSASVLIVGALIDAVDTSSVWMLKDSASLDLRGTSVIAHSNVTVVGIHADASKVALFETHISAPYVFFVSGSAHVAAVRLSVDSWVDPDAAEDDRNVVVLTESARGLFLACRFEGTNLSPQAPLCGRHAIGLRDDATLDVAHSFFVNVPGTLYARDRSSARLSAVSISANTVMPTDNVQTGLKVCTGGAFLLDNSANLFLNGSVLTTPPSVSESGGVGAFAGASRAVIINMTLDGLAAVEVSGGAFFLSGTASANITHSRFTKLFDGNLDTVPTTGGFAMLRDGSSLTVGDSIISSCRAYYGGVLMASGNSIAAFTRVSVGTAVAKAEGGVFYVTDKARLTATDVTVESTFAGLKGGFAYAVKSARVVIEGVGVGSAESRWGALVFATNSARASLSSVAVHNALCKTYPLSDSQRANTPALFVQYEFHGCFVFVSSDAFVEIADVLVADHVTTQFAGALFGLDNNAKVLAQNITVAAVTAGRNGGVAQVKGTSVLSVDGLFVWNASVAISGGIVSATGASTVSIDNFSFQQLFAGLGGGCVHAADTANVTLSRGHIASALTDGPGGVLLASGSSVVRMDAFSVDSASASKGAVFAVSDSVNVVALNLTVNRGVALTDGGCAAVEGSASTAILNSTFQSCASGGRGGTVYASENSAIRMANITVAASRALGSGGFIAAAASATVDVVRMSVSLSSSRGDGGGFAAHDNAVLRIENSDFNSTVASNNGGFLSVGGSTATVMTGVRVTSSSCDGHGGVVSASVRASISITLCTFSDAKGKLTGGFISSTDAATIRVFQTSVVRAWSDVGVPGLFVRGISRVALQRVRLSHLQRPFWSGEGWLSAASGSVSLDNVSCDVCAEDSLLPFDYSLEDSPSLVFDNLTDVPSVGTDEERLDVFLSSLRIDRPLRLHFFAVGAVFLGITIDTTLPFALSNVGFVRSAVVIRGTGVISQAGFEDGSSLTVGEYAHAVLLYVYTTDTSVIIDGHVQFIGAEFQNSRLSIGNLGVGHFQQCTFTSLQLDSKAQSLNNVMPLVVLSRLSFAVFVEFTITGRLNPVIGNGGFARLSGASVLQMENGFVESVRCTGDGGFVSTEIDPSDAMSASLVSITDVSFAPLGANGQGGFMSLRGSSQASVTDCIFDSVEAGSAGGMFYLAERASLSMLSCNVSSSTVVFGHSVIGGGFLAVLDSASVALRDVRVEYSASQSYGGFATIASRTSGGDQGLSSMTAEDLFVGNVFAGDSGGGIECNQCRVSITNGVFGGGSASNAGGLIHIGGVANSLLEFKKCSFNGFSSGVQGGLVSLTDRSSLFLEDCHVSNVQSVVYGGAVVMDAGTVVVNNCTFAHTISLSGGGGSFLVRSGRLQVSDSVFTDTVATLNGGGFLLFERGTVLLQNVTVDGGRCILAGGGVLRMSGRSSLTVRGLVVRSASAAGCGGVLFLDGFADATVDGLSVNNSNSEISDGGAICMIGKGWLSLSNSDIANSTAGSSGGAISANGNTTVILRGVTMRNAEARDGDGGAVYISFGARVDISNSTIDGARCSRRGGAIFAASVASLLTRTLVVRHASAENGGLLYLADAATATMSNTVGVDLSAEDNGGCLYASSNGLELHGGTFTQCRASARPSSYGRGGFLFTDTGVSSLEQLTHLNVIGASSLSAPVVFSSNALAHSQSAGRIFDSLGAVSATFEAGNTSFASPVAHFSVFLMTSNATVTSFPEHASGATLPEFSVEALDYYGNLAFAPPSRPLAIRLGIVNTANSSTGANTVDSGSSGCSLSGDLRRTFPLSSRVDYAGIRLTATFVPTVCTLGFTPDNFLYDEASPLFQSTVLSVSVSACDVGYERVANASAPGVYYCSLIAVGGIAAASSGGSSTTVVVVVVVPVIVVCAAVCAAAMFAIRRNRKRWNAKQMENFAQHVQTSMPGILSVELPEGSVTLCEQLGEGAFGVVHRSEVLMNGRLRMAAAKSLKPNSGVEQRIEFISEAEIMMPLRHENIVSLVGVITKTEPMLIVLEFCSYGALHSFLRKTDRSRNVATGSSASGGGGGSASKHNAGLNLMFVRLAHDIAQGMAYLASQNIVHKDLAARNVLVAVNAFNELVAKIADFGLSRDVGEKGFYQKKKARAIPVRWTAIESLLHSTYDEKSDVWSFGVVLWEIWSFAAVPYPGVSNTEVLSFIRTEGRRLSCPDGCPRQVYTTMLSCWAHNPAERPSFAQLVSVLGDTDSLLKEVGVKGLDAGRAGTTVVLCEDASSPSGRAVAKSTGTGAALSPGARLTARHSKLEAYLDVGDDVCVGASGKEVTGAKAAEDGQSRPLSVGNPYKSADDLICDVPAASNSYDNPGQSVNTVTDRTARANLCGLGAENEELSISPPRSRTLSRLAELDLESPPYPSDAKDITYLQLMPMHSQNKGQAAWLHPQFNEHESAA* # ORIGINAL: g54.t1 original gene structure, not modified by PASA NODE_2749_length_5244_cov_49.8042 AUGUSTUS gene 361 1924 . + . ID=g54;Name=g54.t1 NODE_2749_length_5244_cov_49.8042 AUGUSTUS mRNA 361 1924 . + . ID=g54.t1;Parent=g54;Name=g54.t1 NODE_2749_length_5244_cov_49.8042 AUGUSTUS exon 361 365 . + . ID=g54.t1.exon1;Parent=g54.t1 NODE_2749_length_5244_cov_49.8042 AUGUSTUS CDS 361 365 . + 0 ID=cds.g54.t1;Parent=g54.t1 NODE_2749_length_5244_cov_49.8042 AUGUSTUS exon 475 1924 . + . ID=g54.t1.exon2;Parent=g54.t1 NODE_2749_length_5244_cov_49.8042 AUGUSTUS CDS 475 1924 . + 1 ID=cds.g54.t1;Parent=g54.t1 #PROT g54.t1 g54 MSDVISASAVVEALRETGLLTTAQAKSFAHTFADTNRLKLWLNQLRLNQDQLAPSVGLGWGCLTYFISHSSVAVTLSPGISPLDAAAVLLDYVRIHFATEPKAAVSDSSDSDASDGSGATATTSKKSARRKRNGHCECGGPRKRTTSVSDHADSTCDACDSAHAASGGTRNTLVIPDGSKMCNAITACIRSVCHSNVSDCFSGTPFPSCLSDNGSGAYLDWHVMFLSVRIMAIRFDPFVSEAHRNHVLAPQYQSILLISHLLANPTYGVALLEVCVMMGAFDTNCVKVMSERLRQAQRLAEPIPTHKRGIAIARLLQQLSLFAFLRHKRAYDGSLPGANVDGLREALVANAIDTFAGMENETIWCLFAKHLCQPGYEPKYAGSKDAYSACPVCCCIHTTYRHAGYTAHALRRALVFLMEVSNGFREYAAPIVAGFVAVFPSRALSYFGREFAGQLDGQYEQTIMDPTMVSVFDFCLFAFEQLLL* # PASA_UPDATE: g55.t1, single gene model update, valid-1, status:[pasa:asmbl_4927,status:12], valid-1 NODE_2749_length_5244_cov_49.8042 . gene 3557 5207 . + . ID=g55;Name=g55.t1 NODE_2749_length_5244_cov_49.8042 . mRNA 3557 5207 . + . ID=g55.t1;Parent=g55;Name=g55.t1 NODE_2749_length_5244_cov_49.8042 . five_prime_UTR 3557 3894 . + . ID=g55.t1.utr5p1;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . exon 3557 3901 . + . ID=g55.t1.exon1;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . CDS 3895 3901 . + 0 ID=cds.g55.t1;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . exon 4033 4137 . + . ID=g55.t1.exon2;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . CDS 4033 4137 . + 2 ID=cds.g55.t1;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . exon 4267 5207 . + . ID=g55.t1.exon3;Parent=g55.t1 NODE_2749_length_5244_cov_49.8042 . CDS 4267 5207 . + 2 ID=cds.g55.t1;Parent=g55.t1 #PROT g55.t1 g55 MSARRSSGRLKVASVQKPYTERLGPRWEKPELLAFYDGYMKFGKNWEKIAGTLKDRTADMVEALFMQNKTFLSDTDATANSLNSVMQDMYNKIDEQQSALAANSWKGSSGSPSHANARDHHAGTTPKGAPPAGGRTRTPASPRAAAKTPISASSHNHIANHSGHPGSAGTRSAHVTPRVPSVFNVTPQEEREAARALVSVRQTSKRTRELFPDNGSAVHSSPSVGVVGNGSPAADSLNTSLHGHAAAAALARVASGVDASADDFTALPPKKRARLGVDSPFSASANAASVLAAAERHVTDVMATALKRSPQCRLWVACEWFYSSIDHSLFRMEESYFLEYLHRFSLGKVG* # PASA_UPDATE: g11635.t1, single gene model update, valid-1, status:[pasa:asmbl_4883,status:12], valid-1 NODE_2719_length_5357_cov_65.7242 . gene 385 1229 . + . ID=g11635;Name=g11635.t1 NODE_2719_length_5357_cov_65.7242 . mRNA 385 1229 . + . ID=g11635.t1;Parent=g11635;Name=g11635.t1 NODE_2719_length_5357_cov_65.7242 . five_prime_UTR 385 395 . + . ID=g11635.t1.utr5p1;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . exon 385 568 . + . ID=g11635.t1.exon1;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . CDS 396 568 . + 0 ID=cds.g11635.t1;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . exon 686 796 . + . ID=g11635.t1.exon2;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . CDS 686 796 . + 1 ID=cds.g11635.t1;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . exon 970 1229 . + . ID=g11635.t1.exon3;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . CDS 970 1099 . + 1 ID=cds.g11635.t1;Parent=g11635.t1 NODE_2719_length_5357_cov_65.7242 . three_prime_UTR 1100 1229 . + . ID=g11635.t1.utr3p1;Parent=g11635.t1 #PROT g11635.t1 g11635 MEGAARFQLSNPPVLQMVSLLASLQVYDMTTMDALRTKSLLLTGYLELLLDARLRARSGGDVVSIITPADPTARGCQLSLLFKRPVRPVFDVLESKGIITDIREPSVMRVAPTPLYNTFGDVWSFVDALVATLGESP* # PASA_UPDATE: g11636.t1, single gene model update, valid-1, status:[pasa:asmbl_4884,status:12], valid-1 NODE_2719_length_5357_cov_65.7242 . gene 1407 5144 . + . ID=g11636;Name=g11636.t1 NODE_2719_length_5357_cov_65.7242 . mRNA 1407 5144 . + . ID=g11636.t1;Parent=g11636;Name=g11636.t1 NODE_2719_length_5357_cov_65.7242 . five_prime_UTR 1407 1548 . + . ID=g11636.t1.utr5p1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 1407 1686 . + . ID=g11636.t1.exon1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 1549 1686 . + 0 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 2095 2198 . + . ID=g11636.t1.exon2;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 2095 2198 . + 0 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 2463 2535 . + . ID=g11636.t1.exon3;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 2463 2535 . + 1 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 2825 3696 . + . ID=g11636.t1.exon4;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 2825 3696 . + 0 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 3909 4008 . + . ID=g11636.t1.exon5;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 3909 4008 . + 1 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 4222 4312 . + . ID=g11636.t1.exon6;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 4222 4312 . + 0 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 4617 4767 . + . ID=g11636.t1.exon7;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 4617 4767 . + 2 ID=cds.g11636.t1;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . exon 4978 5144 . + . ID=g11636.t1.exon8;Parent=g11636.t1 NODE_2719_length_5357_cov_65.7242 . CDS 4978 5144 . + 1 ID=cds.g11636.t1;Parent=g11636.t1;3_prime_partial=true #PROT g11636.t1 g11636 MAANGVDVYNAVVDALRRCQHFSTVNAAEQMLKRWEIERGFYSVLMQVIRDKASVEPPVRQLAAVCFKNGVDRYWRRSAANAIEEGEKPFLRSNLLETLDEEGNLIAAQLSVVIAKIARIDHPDHWPELIPRLLDAAKSTNALVQFRALCFMNAVVKTIATKRLASDKARFHQFAPQFFPYVHAVWADLYSSAGDALATAVGVNGSSFDPDAYAAAGRRLAACQMCIRILSRVVASGFDNFATNPTCLSFVSSLPTVMMTLLQYRRALPDAVRPSKEECGGATAFLEACILKAAKGLLNIQALQPIPSLSVLGDALGVFLQLCYTPEAMGLPVVEDVLVRGLALVRASVTCPQYRPAVGKEGATRNDEAARIAGHVMRVCFTPDSVADFVRLLVMKYFPLTATDLEQWDSDPEGFVQEESPENCILALRPAAEAAYQALMSEYTDWVVPVIVDMMQTAAGSESANPGDILAKDAVFSALGLAADSLNDHFDFFGWLSHSAPKELGIGGPLQKIVRRRVAWVIGQSIGLQMFAEQSRAPVYAIVLSLLDSREDLVVKLAAVQALKH # ORIGINAL: g13114.t1 original gene structure, not modified by PASA NODE_3083_length_4369_cov_35.809 AUGUSTUS gene 207 3445 . + . ID=g13114;Name=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS mRNA 207 3445 . + . ID=g13114.t1;Parent=g13114;Name=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 207 354 . + . ID=g13114.t1.exon1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 207 354 . + 1 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 817 989 . + . ID=g13114.t1.exon2;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 817 989 . + 0 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 1303 1423 . + . ID=g13114.t1.exon3;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 1303 1423 . + 1 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 1929 2170 . + . ID=g13114.t1.exon4;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 1929 2170 . + 0 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 2447 2496 . + . ID=g13114.t1.exon5;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 2447 2496 . + 1 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 2808 2943 . + . ID=g13114.t1.exon6;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 2808 2943 . + 2 ID=cds.g13114.t1;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS exon 3277 3445 . + . ID=g13114.t1.exon7;Parent=g13114.t1 NODE_3083_length_4369_cov_35.809 AUGUSTUS CDS 3277 3445 . + 1 ID=cds.g13114.t1;Parent=g13114.t1 #PROT g13114.t1 g13114 YPAGFVYIFGTLFYTTDSGTNLPRAQLIFMAMHLLMLALVFRLYAKTRAVPPYALVAMVLISHRVHSIFVLRLFNDPVAMLLFYASLNLFVDGNWDTGCMLYRHVPRLAVSVKMNVLLFAPALLIVLLRTGGLSRTIRRLALCASIQVALAAPFLLENPVSYMRRAFDLGRQFFYVWTVNWKFIPESLFLDRRFHLVLLLAHIVFLCAFMCRAFDGMFVSVESAIWKLAKLFAALRRRGSLSGHDIATLLFVANFIGIAFARSLHYQFYVWYFHSIPFLLWRTRLHPIARLGLMVAIEVSWNVYPARPWSSLLLAASHSVILHNLWEDIPHTRSDTVENLSHKGE* # PASA_UPDATE: g11009.t1, single gene model update, valid-1, status:[pasa:asmbl_6307,status:3], valid-1 NODE_3613_length_3114_cov_38.2642 . gene 239 2084 . + . ID=g11009;Name=g11009.t1 NODE_3613_length_3114_cov_38.2642 . mRNA 239 2084 . + . ID=g11009.t1;Parent=g11009;Name=g11009.t1 NODE_3613_length_3114_cov_38.2642 . five_prime_UTR 239 453 . + . ID=g11009.t1.utr5p1;Parent=g11009.t1 NODE_3613_length_3114_cov_38.2642 . exon 239 2084 . + . ID=g11009.t1.exon1;Parent=g11009.t1 NODE_3613_length_3114_cov_38.2642 . CDS 454 1797 . + 0 ID=cds.g11009.t1;Parent=g11009.t1 NODE_3613_length_3114_cov_38.2642 . three_prime_UTR 1798 2084 . + . ID=g11009.t1.utr3p1;Parent=g11009.t1 #PROT g11009.t1 g11009 MGTVLCTQKGPLTPPKNSPTPSDRAFLRTFRDDTAPDGAPSPVDLARTGSRTSTNAGVRLQPVGDNNAPSFVSSSDIKIETLENERDDEGYASSVASDIFLPPIESGIRRMPMTTEEADFLACESNLRRKSWPLAANSAPSTDTRSGVDPMLLADFESELVQVVTPCLVRKGETFVRPNEGDSEMYLVKHGTALVCSADGALVYATLEPGAFFGEHGVILPIVFSYPEGACVCAASHMFLHVVQKAKLEELMRKYPPIGDRFFKVMEARQKLSAASSASTTPPTNGRRTKRRWSIATTRSSRPVLYSIREVVHETVHEDIYRSRRERVSLPALGVALGESQRPETMPASRPRSQSVQYDRLPSLTTTTTTMSLSPKGMTTSASTGFDRSLVQRNPEAFLKSFTGEATIYNASPAVGGTVNLPCSQDQRSPRTSSPNRSLSPKLPIFM* # PASA_UPDATE: g7639.t1, single gene model update, valid-1, status:[pasa:asmbl_10124,status:12], valid-1 NODE_958_length_15449_cov_36.4348 . gene 8360 13110 . + . ID=g7639;Name=g7639.t1 NODE_958_length_15449_cov_36.4348 . mRNA 8360 13110 . + . ID=g7639.t1;Parent=g7639;Name=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 8360 8469 . + . ID=g7639.t1.exon1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 8360 8469 . + 0 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 8680 8989 . + . ID=g7639.t1.exon2;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 8680 8989 . + 1 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 9112 9326 . + . ID=g7639.t1.exon3;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 9112 9326 . + 0 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 9491 9536 . + . ID=g7639.t1.exon4;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 9491 9536 . + 1 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 9719 9934 . + . ID=g7639.t1.exon5;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 9719 9934 . + 0 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 10177 10498 . + . ID=g7639.t1.exon6;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 10177 10498 . + 0 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 10657 10906 . + . ID=g7639.t1.exon7;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 10657 10906 . + 2 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 11828 11934 . + . ID=g7639.t1.exon8;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 11828 11934 . + 1 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . exon 12176 13110 . + . ID=g7639.t1.exon9;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . CDS 12176 12897 . + 2 ID=cds.g7639.t1;Parent=g7639.t1 NODE_958_length_15449_cov_36.4348 . three_prime_UTR 12898 13110 . + . ID=g7639.t1.utr3p1;Parent=g7639.t1 #PROT g7639.t1 g7639 MYVARLPQSGLGDIVIRIQAVLVIAISVLSVASGTARLESLTLSVDVDADRATYSVSVEQRAWLTGGTIAFREAASWHVAGRNLTIVSTVNDNGIDDALGPYARISLTWVSDTDDGTKFVTSFRSFKEIDALAFDQYFPTGAANTSVGDTNDVVSAFPAFLAGSPVALNFLSFADVFAEPQYGQWADGASRTKYGGGAVSGVPLILYNSSASAVVISPFGNYMVGVQTISKSLGGVFACGLQGLLPDIPVGFTHTTLLLYGNGVHECMSDWGNALLRRSGKPRTLPTADVVVSHLGYWTDNGAYYSYLTENATASYESTLEHISAYLHDSDIPAAYVQYDSYWYQKAKAGGMFRWEPNSVYFPHGFNWTLSAVPTVLHANYFDETTDYRNSHNMQCADGFCIPLDDGVYLEMMGKAKEAWHLAVYEQDWMITVFEGMGFMRENITAARTWLVAMGDAAAHHGLTVQYCMATAGQLLQSTEIPAVTQARARYPLGCLEPNPLLNALVSALSAGPVGPSDKIGLIDKTLVMRTCRSDGLLLKPDRPFFPPDASFRSTFAALRKERVHGDLGHVKWTIPFNIGTTESQHGALLWRYVLATRVDATGVGIHPLDIDMSAGDVASTEYVAFDFFAFQSNATVAVFSDTLPLLLVPVHQPSMSTQVPFSYQVVAPVITLSGGAIVILGETDKFVTMSTLRFTSFLVGDSAVTLEIVGVAGETVLVSYAAGWSIGHSGRSEPVPSISSVSCLVGQAGGALVKCDAHSCACSA* # ORIGINAL: g7638.t1 original gene structure, not modified by PASA NODE_958_length_15449_cov_36.4348 AUGUSTUS gene 1026 4170 . - . ID=g7638;Name=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS mRNA 1026 4170 . - . ID=g7638.t1;Parent=g7638;Name=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 4020 4170 . - . ID=g7638.t1.exon1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 4020 4170 . - 0 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 3531 3928 . - . ID=g7638.t1.exon2;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 3531 3928 . - 2 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 2772 3450 . - . ID=g7638.t1.exon3;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 2772 3450 . - 0 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 2448 2662 . - . ID=g7638.t1.exon4;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 2448 2662 . - 2 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 2216 2330 . - . ID=g7638.t1.exon5;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 2216 2330 . - 0 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 2072 2120 . - . ID=g7638.t1.exon6;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 2072 2120 . - 2 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 1771 1959 . - . ID=g7638.t1.exon7;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 1771 1959 . - 1 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 1565 1698 . - . ID=g7638.t1.exon8;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 1565 1698 . - 1 ID=cds.g7638.t1;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 1026 1468 . - . ID=g7638.t1.exon9;Parent=g7638.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 1026 1468 . - 2 ID=cds.g7638.t1;Parent=g7638.t1 #PROT g7638.t1 g7638 MGATCDAACPSGQYGPNCMLPCPCGSGACSRFDGTCICEAKTGFYGSSCKSCACNSGLCYDGFLGNGTCDCNALLGVGGPNCNTSCDGLSWWGYGCQTPCICENGAACNASTGECTCVFGWRGVKCDLVVPPAAPKVNATAELTQRGIGIRLTWTDGEVGPRAWPNSWRYEIRRLGCFPTVYQVGDVFTFLDTNVTIGQGYAYFVQPFNRLNVSSTTASQISIERLEKAAVPSPPYDVSSTATLNPSDQRSMIKFTWKEDTSSGPIIETYIFRDHRLVLQGRMATEYKDREVVFGKTYLYEIISVNQYGRSNATGFNETASVTDSSTPAAGASSSSNVAGPVAGGVVGAIVGAAGIVFAILFARKRTSRKKMEALIRTELDLIDTVVRRPEIAEIEIPGSCIFLRNRIGEGEFGEVYLADITPRGGSITAIKAAVKTFKVTSLSSADEVRSARSAFMAEINLMRTIPSHSNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSGSKVSDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRATNSMESGWKLSAKAQVIVKVADMGLSRDTGASSDYYVSKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVVWEVFARGAKPYPGLENHAVSNYLSQNKRMEPPKDCPKLVGTAMEACWRKHAETRPQFTQIVRQLRRGMAVLCGTEGGGPGGPGGGGGDFDVTNAAHSTAEHFQSETYALLVPEDNYLEMVKPGKEESLHTLGNEMFQKDDSFSKTGPLAETARAAAHQNKYEYWAAE* # ORIGINAL: g7640.t1 original gene structure, not modified by PASA NODE_958_length_15449_cov_36.4348 AUGUSTUS gene 13713 15284 . - . ID=g7640;Name=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS mRNA 13713 15284 . - . ID=g7640.t1;Parent=g7640;Name=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 14941 15284 . - . ID=g7640.t1.exon1;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 14941 15284 . - 0 ID=cds.g7640.t1;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 14580 14707 . - . ID=g7640.t1.exon2;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 14580 14707 . - 1 ID=cds.g7640.t1;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 14245 14312 . - . ID=g7640.t1.exon3;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 14245 14312 . - 2 ID=cds.g7640.t1;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS exon 13713 13847 . - . ID=g7640.t1.exon4;Parent=g7640.t1 NODE_958_length_15449_cov_36.4348 AUGUSTUS CDS 13713 13847 . - 0 ID=cds.g7640.t1;Parent=g7640.t1 #PROT g7640.t1 g7640 MSDPHISRLTARAIADWHKKHVPGDSTPMLFVTLEKWLTIVPEAFDDPAKEKKYKEKFSMVQIRAELQRLRSVLETLGSPIVFSHNDLLCKNILFNAESDTIHFIDYEYANNSYRGFDIGNHFCEFAGMEEPVDYGRYPKREFQLVWLRNYLSSYNGVPESEVTPDEVEALYREVNKFALAAHFYWGSWALVQAGFSDIDFDYLDYALVRFAEYFRRRDEFLSL* # PASA_UPDATE: g4962.t1, single gene model update, valid-1, status:[pasa:asmbl_7003,status:12], valid-1 NODE_4127_length_2145_cov_29.1242 . gene 1321 1967 . - . ID=g4962;Name=g4962.t1 NODE_4127_length_2145_cov_29.1242 . mRNA 1321 1967 . - . ID=g4962.t1;Parent=g4962;Name=g4962.t1 NODE_4127_length_2145_cov_29.1242 . exon 1880 1967 . - . ID=g4962.t1.exon1;Parent=g4962.t1 NODE_4127_length_2145_cov_29.1242 . CDS 1880 1967 . - 0 ID=cds.g4962.t1;Parent=g4962.t1;5_prime_partial=true NODE_4127_length_2145_cov_29.1242 . exon 1321 1591 . - . ID=g4962.t1.exon2;Parent=g4962.t1 NODE_4127_length_2145_cov_29.1242 . CDS 1473 1591 . - 2 ID=cds.g4962.t1;Parent=g4962.t1 NODE_4127_length_2145_cov_29.1242 . three_prime_UTR 1321 1472 . - . ID=g4962.t1.utr3p1;Parent=g4962.t1 #PROT g4962.t1 g4962 AQETHADIRGWFRANVNGAVADSVRIIYGGSVTAGNAAELAKKEDVDGFLVGGASLKPDFVKIFQARL* # ORIGINAL: g4961.t1 original gene structure, not modified by PASA NODE_4127_length_2145_cov_29.1242 AUGUSTUS gene 2 143 . + . ID=g4961;Name=g4961.t1 NODE_4127_length_2145_cov_29.1242 AUGUSTUS mRNA 2 143 . + . ID=g4961.t1;Parent=g4961;Name=g4961.t1 NODE_4127_length_2145_cov_29.1242 AUGUSTUS exon 2 143 . + . ID=g4961.t1.exon1;Parent=g4961.t1 NODE_4127_length_2145_cov_29.1242 AUGUSTUS CDS 2 143 . + 1 ID=cds.g4961.t1;Parent=g4961.t1 #PROT g4961.t1 g4961 GDMDCWSTLVCHGVPRAARRHGPQVSSGRPPSIPRRNVVRWGLAAVL # ORIGINAL: g7458.t1 original gene structure, not modified by PASA NODE_943_length_15673_cov_89.0149 AUGUSTUS gene 4532 5575 . + . ID=g7458;Name=g7458.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS mRNA 4532 5575 . + . ID=g7458.t1;Parent=g7458;Name=g7458.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS exon 4532 5575 . + . ID=g7458.t1.exon1;Parent=g7458.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS CDS 4532 5575 . + 0 ID=cds.g7458.t1;Parent=g7458.t1 #PROT g7458.t1 g7458 MASQPTVSFSSLPVEVIMCHFVPLLSNEDIASLAGVNSRLRCVLKHVRVYRLRPAFAMQYWESAAFHKAVWADIPRERLELELTGVQSVHGDLSVLGGVRSLNLSHCIVVTDVSALGGVHSLNLTYCSVTDVSALGGVHSLNLSRCHWVTDVSALGGVHSLNLSFCGGVTDVSALGGVRSLDLSNCERVTDVSALGGVHSLNLSSCTGVTDVSALGGVHSLNLFFCDGVTDVSALGGVHSLDLSCCERVTDVSALGGVHSLELSGCLGFTDVSALGGVHSLNLSGCQGVTDVSALGGVHSLILRNCDGVTDVSVLGTVHSLNLVNCYRVKDISALRGVCSLILTYDF* # PASA_UPDATE: g7459.t1, single gene model update, valid-1, status:[pasa:asmbl_10063,status:3], valid-1 NODE_943_length_15673_cov_89.0149 . gene 7746 11357 . + . ID=g7459;Name=g7459.t1 NODE_943_length_15673_cov_89.0149 . mRNA 7746 11357 . + . ID=g7459.t1;Parent=g7459;Name=g7459.t1 NODE_943_length_15673_cov_89.0149 . five_prime_UTR 7746 8046 . + . ID=g7459.t1.utr5p1;Parent=g7459.t1 NODE_943_length_15673_cov_89.0149 . exon 7746 11357 . + . ID=g7459.t1.exon1;Parent=g7459.t1 NODE_943_length_15673_cov_89.0149 . CDS 8047 10476 . + 0 ID=cds.g7459.t1;Parent=g7459.t1 NODE_943_length_15673_cov_89.0149 . three_prime_UTR 10477 11357 . + . ID=g7459.t1.utr3p1;Parent=g7459.t1 #PROT g7459.t1 g7459 MSPGGAVAVHSASTMTQHVRTPYYSGGSPAVGIHSHALNTHNQHSHQHQHHPHGHTLSSSLPITTSIYMSTSSPSGMSPSGAHNVQVFHSASSDLFDGFDDAHDGLAEVAHSTAAATLNDDDDGEDDEDFTDFEPRSRRHSEQVGSFSMQMRHQHQQQQQHQHTHRTGGQRMLASSMSLPHGMLTSGLLGSSSSPKTLRAGSVGGGLHAQLSHPGSASDLNPHAHPFVLPGGNGKPSKPSHRQVVALQRGLSLSGDEEDDGNGTSPQYARARRASANEGSTPSAESLRRRRHSLESIDFRFANVVDVPSFLRALRLHKYTDTFTAAGVTMESLLTMEEKGLAALGVSAQGARRRLLLAARKYADSVAAHRSHSGGQHPQQQHQQHHQQQLHSSNEGLHLNLTPPSSLPSASEFLAVPFDHFDLMQQQQHQQPSQHQQQQQLRQRPASPSISVEGVVDPFRSSSPSSPGRAALGASTHAYLHQTSLGRTGSVSSMGSIEEQPFGSDREHDGDSGNASSPHGSYHGDEDDQLEASLRIEGERLLGMISDGHSFERSKSPVLRVPSPNQLAVPHSPTRSPRKLTPSSSLSSLHSTTSMAAAPLVTVVQRNPSPVSGSHQHAAYASVITAADVEGMPGGRPVGMSSTRSAEAPAVLARNAQDDASQSLQPNEGSTRQRRRHSIAVVNHSYYWRKPDIRDWLRSLRLHKYTEVLLRQGVDFERLSYMTEDDMANVGVTTAGARKRLTIAMDDYRRQMERAMAAISAGMHPQPLVMPAGFAAIGGSETNSGTQSPATPGYAYSHDGARSNDSLNK* # ORIGINAL: g7460.t1 original gene structure, not modified by PASA NODE_943_length_15673_cov_89.0149 AUGUSTUS gene 13827 15349 . + . ID=g7460;Name=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS mRNA 13827 15349 . + . ID=g7460.t1;Parent=g7460;Name=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS exon 13827 14103 . + . ID=g7460.t1.exon1;Parent=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS CDS 13827 14103 . + 0 ID=cds.g7460.t1;Parent=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS exon 14773 14883 . + . ID=g7460.t1.exon2;Parent=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS CDS 14773 14883 . + 2 ID=cds.g7460.t1;Parent=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS exon 15231 15349 . + . ID=g7460.t1.exon3;Parent=g7460.t1 NODE_943_length_15673_cov_89.0149 AUGUSTUS CDS 15231 15349 . + 2 ID=cds.g7460.t1;Parent=g7460.t1 #PROT g7460.t1 g7460 MQFDPQLMTPAFSVGGVDYVFPESRVKHRSFGERICYGTGTSYLAGLSVGGAWGLYEGLRNPLAVSRKLKINSVLNGMTKRGPFLANNAGVIAFTYNALNALAVQVREEDDAINVMGSAVLAGVIFKSTAGIRPMAIAGALGGAFAGAMLLAEEYAGGLPFSFGKPYH* # ORIGINAL: g1725.t1 original gene structure, not modified by PASA NODE_777_length_17821_cov_42.6116 AUGUSTUS gene 198 366 . + . ID=g1725;Name=g1725.t1 NODE_777_length_17821_cov_42.6116 AUGUSTUS mRNA 198 366 . + . ID=g1725.t1;Parent=g1725;Name=g1725.t1 NODE_777_length_17821_cov_42.6116 AUGUSTUS exon 198 366 . + . ID=g1725.t1.exon1;Parent=g1725.t1 NODE_777_length_17821_cov_42.6116 AUGUSTUS CDS 198 366 . + 1 ID=cds.g1725.t1;Parent=g1725.t1 #PROT g1725.t1 g1725 GQVVEVAGKGVYRLHGLSRSGALLAVSDSTNAVEELQPDYNSFDMTRGLISAKAR* # PASA_UPDATE: g1726.t1, single gene model update, valid-1, status:[pasa:asmbl_9321,status:12], valid-1 NODE_777_length_17821_cov_42.6116 . gene 951 2999 . + . ID=g1726;Name=g1726.t1 NODE_777_length_17821_cov_42.6116 . mRNA 951 2999 . + . ID=g1726.t1;Parent=g1726;Name=g1726.t1 NODE_777_length_17821_cov_42.6116 . five_prime_UTR 951 1018 . + . ID=g1726.t1.utr5p1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . five_prime_UTR 1354 1356 . + . ID=g1726.t1.utr5p2;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . exon 951 1018 . + . ID=g1726.t1.exon1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . exon 1354 1446 . + . ID=g1726.t1.exon2;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . CDS 1357 1446 . + 0 ID=cds.g1726.t1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . exon 1720 1791 . + . ID=g1726.t1.exon3;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . CDS 1720 1791 . + 0 ID=cds.g1726.t1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . exon 2295 2393 . + . ID=g1726.t1.exon4;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . CDS 2295 2393 . + 0 ID=cds.g1726.t1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . exon 2709 2999 . + . ID=g1726.t1.exon5;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . CDS 2709 2822 . + 0 ID=cds.g1726.t1;Parent=g1726.t1 NODE_777_length_17821_cov_42.6116 . three_prime_UTR 2823 2999 . + . ID=g1726.t1.utr3p1;Parent=g1726.t1 #PROT g1726.t1 g1726 MVDFMAIGKNFCQFYYNTFDTNREGLRDLYQADSMLTFEDAQHCGQAAIMEKLRSLPFSTSLHAITTCDCQPSFEGGILIFVVGQLTTEGQQHALGFSQVFQLKAAGGAFYVLNDMFRISVHSM* # PASA_UPDATE: g1729.t1, single gene model update, valid-1, status:[pasa:asmbl_9327,status:12], valid-1 NODE_777_length_17821_cov_42.6116 . gene 9735 13258 . - . ID=g1729;Name=g1729.t1 NODE_777_length_17821_cov_42.6116 . mRNA 9735 13258 . - . ID=g1729.t1;Parent=g1729;Name=g1729.t1 NODE_777_length_17821_cov_42.6116 . exon 12760 13258 . - . ID=g1729.t1.exon1;Parent=g1729.t1 NODE_777_length_17821_cov_42.6116 . CDS 12760 13258 . - 0 ID=cds.g1729.t1;Parent=g1729.t1 NODE_777_length_17821_cov_42.6116 . exon 9735 12672 . - . ID=g1729.t1.exon2;Parent=g1729.t1 NODE_777_length_17821_cov_42.6116 . CDS 9950 12672 . - 2 ID=cds.g1729.t1;Parent=g1729.t1 NODE_777_length_17821_cov_42.6116 . three_prime_UTR 9735 9949 . - . ID=g1729.t1.utr3p1;Parent=g1729.t1 #PROT g1729.t1 g1729 MAGRDDDDVTGFVPGRPSPAYNSSNTPLFTPEQTQLLDKKQAFADAFCRTFVHELLYLTDIASGRIFASLPEREAFINDVVRLLGTVAVSQSTLAGGAVAIASLQASLLCKSAEIGDEDEVERKHAAALGQLVWSYSETRHKVNARRIAVALATAFEFQLWHLTLEMDDLVAAVRFGKCGTLANRWLKGVKVVTTNADVYAKWKVGDVLGRCGLTDGVRFFSKFGDGDHTVEVEAAHVLPNKPLDVHPKYGFAFMSPSACERLALERGLVEVQPSERMVAWIRSVPMVTCLVTPRHVDAYLRMHPPVSKHLASASASGARVANVGFAAFIARGFGKCGKVPLVVGSLDGMVLSGGDFSGCDLSHASMSGCTMVGGSFAWAWLAGCTLMHSVFVDVDFGGSHLEDVRASNAVFTRVTMDNSHAEYADVHGAQMEQTDYAAAQWDPERLYEEGYQQTKEGRCAIDIAAINAIMYVSMESLLDVVTAFEAASRSRQSVRLLSHIIRAEITLYARRSSRVLLQSIDAGTHLLQPQSVHSSRDASAQAAAAVNLDCGEPSADTAHLGATSSRGAVRQPRRTAAIRRGKKPRSADRSCESSDASREGTEDEDEGLGVYPGTRDAAAGSNISASAAAAERESNLERAPAVSIPVVPPRPPHIRLLVGSEHAQTTATDATGESHEEKASGVDDSDEEYTGMCAIPLDARDAMALSASLPMIPPRPLSPRPVDGTTPTPLPRPALTTAHDAATSPRPLPRPSLLDSDGKASDSSVLMHTVSPAATSVPTPRPRPVPRPDTTADTVQSSSNRFRPLDDAPPAYETVVADKTAASMQLAPSVTHTIDLCLLLDATDTMDGWLNEAVASLASIQTSIEHATRSSVRVAVVLYRDYDPVASMSWLRRVRFSADATDALRLLESACNGMGDGNYSHDDADDVAGGLQKALTLDWKGTCRVLLHVCDAPPHGRAFHTGTAVVRPTDRFLDSVPPEMLHNDSALECLRRMCRNGVDYTLVRAGTAETVLHTAKMEGVFRSCYADTAKGNSAPCTFGSFRSVTAGNGAAALAEIAVQAVLGSVQSNNLPA* # PASA_UPDATE: g1728.t1, single gene model update, valid-1, status:[pasa:asmbl_9324,status:3], valid-1 # PASA_UPDATE: g1728.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9325,status:3], valid-1 NODE_777_length_17821_cov_42.6116 . gene 6540 9194 . - . ID=g1728;Name=g1728.t1 NODE_777_length_17821_cov_42.6116 . mRNA 6540 9194 . - . ID=g1728.t1;Parent=g1728;Name=g1728.t1 NODE_777_length_17821_cov_42.6116 . five_prime_UTR 8864 9194 . - . ID=g1728.t1.utr5p1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . exon 8761 9194 . - . ID=g1728.t1.exon1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . CDS 8761 8863 . - 0 ID=cds.g1728.t1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . exon 8197 8400 . - . ID=g1728.t1.exon2;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . CDS 8197 8400 . - 2 ID=cds.g1728.t1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . exon 7697 7886 . - . ID=g1728.t1.exon3;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . CDS 7697 7886 . - 2 ID=cds.g1728.t1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . exon 7255 7414 . - . ID=g1728.t1.exon4;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . CDS 7255 7414 . - 1 ID=cds.g1728.t1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . exon 6540 6901 . - . ID=g1728.t1.exon5;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . CDS 6638 6901 . - 0 ID=cds.g1728.t1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . three_prime_UTR 6540 6637 . - . ID=g1728.t1.utr3p1;Parent=g1728.t1 NODE_777_length_17821_cov_42.6116 . mRNA 6540 9194 . - . ID=g1728.t1.1.5b6be70c;Parent=g1728;Name=g1728.t1 NODE_777_length_17821_cov_42.6116 . five_prime_UTR 8699 9194 . - . ID=g1728.t1.1.5b6be70c.utr5p1;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . exon 8197 9194 . - . ID=g1728.t1.1.5b6be70c.exon1;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . CDS 8197 8698 . - 0 ID=cds.g1728.t1.1.5b6be70c;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . exon 7697 7886 . - . ID=g1728.t1.1.5b6be70c.exon2;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . CDS 7697 7886 . - 2 ID=cds.g1728.t1.1.5b6be70c;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . exon 7255 7414 . - . ID=g1728.t1.1.5b6be70c.exon3;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . CDS 7255 7414 . - 1 ID=cds.g1728.t1.1.5b6be70c;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . exon 6540 6901 . - . ID=g1728.t1.1.5b6be70c.exon4;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . CDS 6638 6901 . - 0 ID=cds.g1728.t1.1.5b6be70c;Parent=g1728.t1.1.5b6be70c NODE_777_length_17821_cov_42.6116 . three_prime_UTR 6540 6637 . - . ID=g1728.t1.1.5b6be70c.utr3p1;Parent=g1728.t1.1.5b6be70c #PROT g1728.t1 g1728 MQYILAGVDDLEFDIEVSLESQLVGNAIIFERMDKSGADICKQYLRGTCPRGVTCPYRHTRAEKSVVCKHWLRGLCKKGDSCEFLHQYDMTKMPECFFFMKYGECTNKDCQYQHIDPESKKKDCPWYDRGFCKHGPSCRHRHVKRVACQNYVTGFCPLGKECKFAHPKWDQPLDDAVVTGSSRPVVCHRCGEAGHKAPNCPHAAEEGGGSRLDGVVCYKCGERGHFANKCTNAPSGGGRPFGQQQYPPQQQQQQQQQQQQQQQQQQQHVQPYQQRQQQQQQQAPYQHMPFQQQQHGGPPQRDGAER* #PROT g1728.t1.1.5b6be70c g1728 MSCQRTVWVPLSAGWMAVAGLLPVERRYEFLRLPHPLYSRYNRLFLFCLDLSDVVVAPLCRVSSLSLSLSFTLSLSLSRALSFLSLSPSLSLSLLLSIAESGADICKQYLRGTCPRGVTCPYRHTRAEKSVVCKHWLRGLCKKGDSCEFLHQYDMTKMPECFFFMKYGECTNKDCQYQHIDPESKKKDCPWYDRGFCKHGPSCRHRHVKRVACQNYVTGFCPLGKECKFAHPKWDQPLDDAVVTGSSRPVVCHRCGEAGHKAPNCPHAAEEGGGSRLDGVVCYKCGERGHFANKCTNAPSGGGRPFGQQQYPPQQQQQQQQQQQQQQQQQQQHVQPYQQRQQQQQQQAPYQHMPFQQQQHGGPPQRDGAER* # PASA_UPDATE: g1730.t1, single gene model update, valid-1, status:[pasa:asmbl_9322,status:12], valid-1 NODE_777_length_17821_cov_42.6116 . gene 13999 17575 . + . ID=g1730;Name=g1730.t1 NODE_777_length_17821_cov_42.6116 . mRNA 13999 17575 . + . ID=g1730.t1;Parent=g1730;Name=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 13999 14092 . + . ID=g1730.t1.exon1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 13999 14092 . + 0 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 14228 14680 . + . ID=g1730.t1.exon2;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 14228 14680 . + 2 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 14880 15365 . + . ID=g1730.t1.exon3;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 14880 15365 . + 2 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 15569 15897 . + . ID=g1730.t1.exon4;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 15569 15897 . + 2 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 16116 16322 . + . ID=g1730.t1.exon5;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 16116 16322 . + 0 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 16549 16647 . + . ID=g1730.t1.exon6;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 16549 16647 . + 0 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 16864 17029 . + . ID=g1730.t1.exon7;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 16864 17029 . + 0 ID=cds.g1730.t1;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . exon 17265 17575 . + . ID=g1730.t1.exon8;Parent=g1730.t1 NODE_777_length_17821_cov_42.6116 . CDS 17265 17575 . + 2 ID=cds.g1730.t1;Parent=g1730.t1 #PROT g1730.t1 g1730 MQVHVPNRDHSMPIHTHCGRQHNTLTISSRLDLTDAAPCSLIILDEDLVFPVTNSNNGMLTTIIPAVKDASKFVDAGCSCPANSTILLEVFISNTTYVLKRFEYTKLDDTQGFAFDLPDAPQRTLGWTTVTATVTGFVAANIAPWGNMDRLQLTRTGPAWVPPGVSIRIRRIELIKELPTCDGIPTPAPPFPIPECSIGDFVGKYWSTARPNGNADYARCESFPLSLYFDSSPVLNGIPKTSFSAEYSGSFDFPETAIYEFAAKADDGVRVILDEDTVVIDDYDRPQLQLIVKQLNVTAGTHTVRIQYYQNSGPASITADWKKARPTFVPYDYTHIPPATLPTPESAPCPHTMDGLLLWSSASTWMTLNQPIPTTGSVVNIPVGYKLRLDITPPVLRGIVVDGIFVIYPGDSSSLSLMTQYIRVSAKAEMHVGSPACPIATKVNITLMTPADTKENYKNAGTKHIVVEAEGRIEMHGALKLPSWTRLRETAKAADTVLKLMVPVSWEVGDRIAVASTDFDQAQAEEFTIASITNGGLDIGIVGQLKYMHFSGVTYGVPEHAEVGLLTRKVVVMGQADANGFGGHMMFRSSPPPTVHLSGVEVTQMGQKGVMGRYPIHWHMIGESKGLSWARDNSIHHNYQRCCTLHGVHGVTLERNVAFKTNGHCFFFEDGVEQRNILNMCVFCVPNCDCFISTACFGLKCADVCEQVLVGRVS* # PASA_UPDATE: g1727.t1, single gene model update, valid-1, status:[pasa:asmbl_9323,status:3], valid-1 NODE_777_length_17821_cov_42.6116 . gene 4074 6306 . - . ID=g1727;Name=g1727.t1 NODE_777_length_17821_cov_42.6116 . mRNA 4074 6306 . - . ID=g1727.t1;Parent=g1727;Name=g1727.t1 NODE_777_length_17821_cov_42.6116 . five_prime_UTR 5891 6306 . - . ID=g1727.t1.utr5p1;Parent=g1727.t1 NODE_777_length_17821_cov_42.6116 . exon 5735 6306 . - . ID=g1727.t1.exon1;Parent=g1727.t1 NODE_777_length_17821_cov_42.6116 . CDS 5735 5890 . - 0 ID=cds.g1727.t1;Parent=g1727.t1 NODE_777_length_17821_cov_42.6116 . exon 4074 5423 . - . ID=g1727.t1.exon2;Parent=g1727.t1 NODE_777_length_17821_cov_42.6116 . CDS 4686 5423 . - 0 ID=cds.g1727.t1;Parent=g1727.t1 NODE_777_length_17821_cov_42.6116 . three_prime_UTR 4074 4685 . - . ID=g1727.t1.utr3p1;Parent=g1727.t1 #PROT g1727.t1 g1727 MLRLIRCLHHLSTFNIAAQRSQDYAKARRLLFRNQLIGWSILIPTLLTWSSMGAVLLKLHGVKPLLKSAWRNQMTVFALIGLLAFQMGQQYYRTGTVWVRRTFIPHKKSVSIAETEEVQVPSWARFFLVCFACSVCQVAFNALWIWSLSNTTVAHSYLFGNCQTLVIIAGLWLFRQEVSIGETIGALIGFAGAGMALIDIKSDKASVTWEGDLAAFGSSLALVGFLFAVRALRQSGLPLSYYMLPMVLMCTVMLAGVAAVVEGVTMGADPQTGMFGWANGQWALIVLYLVFIGECGI* # PASA_UPDATE: g3685.t1, single gene model update, valid-1, status:[pasa:asmbl_41,status:12],[pasa:asmbl_42,status:12], valid-1 NODE_1011_length_14747_cov_44.282 . gene 2 3846 . + . ID=g3685;Name=g3685.t1 NODE_1011_length_14747_cov_44.282 . mRNA 2 3846 . + . ID=g3685.t1;Parent=g3685;Name=g3685.t1 NODE_1011_length_14747_cov_44.282 . five_prime_UTR 2 3 . + . ID=g3685.t1.utr5p1;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . exon 2 1048 . + . ID=g3685.t1.exon1;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . CDS 4 1048 . + 0 ID=cds.g3685.t1;Parent=g3685.t1;5_prime_partial=true NODE_1011_length_14747_cov_44.282 . exon 1231 2280 . + . ID=g3685.t1.exon2;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . CDS 1231 2280 . + 2 ID=cds.g3685.t1;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . exon 2413 3846 . + . ID=g3685.t1.exon3;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . CDS 2413 3593 . + 2 ID=cds.g3685.t1;Parent=g3685.t1 NODE_1011_length_14747_cov_44.282 . three_prime_UTR 3594 3846 . + . ID=g3685.t1.utr3p1;Parent=g3685.t1 #PROT g3685.t1 g3685 CAVHQVIDACLSCDDQCYGDNNKCDEETGKCSECDKSNAEGDRCERCKAGYFGDPVRGIPCQPCLCYHSADTDWSTYPDSTLTTQDLCALRNEIASDRSCVLDESLLTGPLITAIINDPSKAYQAIRCNCPLDSTIPAGFFHKNNGTVYGGQQCDSCKPAVYYGQPTNCVKPGAGDNENLEVGGCEEFDVCKQCTCYGNINETEIWRDNCHADGSGDLVCTGCLGHTTGKQCENCQDGYYGVATRLDTDGILGLGHVIGANLTSLKCRKCDCNGQALDRVTVEGNEIDGIDGDMCNTTATGEWGEFKCKCNEELGYTGPKCRECMGGYTLKRGRNATGDIDPAYDYCEPCSTCIVAAFKDYVNPFSATYNDDRNTVDYLNTTAYAEADDANALHTAVDALSSQFDTTSIPALGNSMGNAIGTATSQMTNFASSQFNAIGGIQSGVGSLDGGIGSATGQADGLAQHQAFIDTFSASVIASVSSSFSQTSDRFEDIADDIANVQTDFSGVGAITSGVAGKISAINTAIGSITPTLNRVNTGADGINTHLDSIVDLSTAQLQAVLDDELGASMDAVLTQVDNERLALLAEVDTPYNALYADIDARRDALAAKLDTQDATLDAIEASITAANAAIDSAEDAIDDLPTLVGDSTAEVLADAAAARVTVDSDSDDTIDSLKTRFDDVLTQVLSTFNKLENTFIDVRYPATSDNANPFVNVINQNTQFGGKDGKTYLGCGLGGADQAVVFEGAGYVNVSTGAPDAYGLTITGWLLQEEGTNGYFFVKAGPNDLRNYGLLSEASKQRLTFYYLNSLTATTHKTVVIPLASPIDDGKWHHISVVFTKTNVAFVMIYVDGVKVTGIQINDRIVDNAALPVLFGARLPLTFPFSGRMEQIRLYKEDLSAAAIKGLYADPPTSPDALRLDIIGSDEIAFDGITTLVQSASTSIPTLDNGITMYGEVKQVTGNDGYLMIRSDSTGTTRYYGLQLDGKTSRLVFYYLHTNITKGFASVAVPFAVNDGKFHAVALTVQGTTAKFFVDGVVVGTQKLVAPLRNVETLAPMNVGMRSSATGPVFRFKGAMRNVWFTNSAVCEDNLMGS* # ORIGINAL: g3687.t1 original gene structure, not modified by PASA NODE_1011_length_14747_cov_44.282 AUGUSTUS gene 10592 14678 . + . ID=g3687;Name=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS mRNA 10592 14678 . + . ID=g3687.t1;Parent=g3687;Name=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS exon 10592 10655 . + . ID=g3687.t1.exon1;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS CDS 10592 10655 . + 0 ID=cds.g3687.t1;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS exon 10802 10918 . + . ID=g3687.t1.exon2;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS CDS 10802 10918 . + 2 ID=cds.g3687.t1;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS exon 11114 12418 . + . ID=g3687.t1.exon3;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS CDS 11114 12418 . + 2 ID=cds.g3687.t1;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS exon 12609 13145 . + . ID=g3687.t1.exon4;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS CDS 12609 13145 . + 2 ID=cds.g3687.t1;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS exon 13449 14678 . + . ID=g3687.t1.exon5;Parent=g3687.t1 NODE_1011_length_14747_cov_44.282 AUGUSTUS CDS 13449 14678 . + 2 ID=cds.g3687.t1;Parent=g3687.t1 #PROT g3687.t1 g3687 MRSLLHVGVALLAMSMLVRFAGADWTMTMYDTFKPASVSGNELITASPSNWTGMPFISEKLSLPTLDSSAGGQACGTKHAAALYAATTDAQAGSVVLTLDFTAIDDFNSAFVVAAGVENSGNLYVFGCDSTDQRNMCRLQIHNVAEDFGADGDTFALVAGQTYKLRAEIAKTNMTMKVSLMYSNGTIASGLTFTAPASKRLALTAFANYGVAIGADLAQKNLCVDNFKAVWLDNAGNPNTMAADDYASAGISGAKMKQVGSYVKPAPTRYTPSVSSPLIGACSIGSTGSAILVNDFTAEPAVRVRMGLRGGTQASFNYKIFFQGPLQNRPGMGVSSAGVDCYNFNKNGNNNNNNSNSNNPDYSVCQLFIRDEASQNNGGWSTTMQIMYAHSYTLAIDVFGRTVSATLSQDGTTTNVTLSGYQITAYTVSQVGFTIGGGSSTADFACLPWFALFGIAKMPAPASEKYTSQWTPVYYENFSGESALSGAWHAATMDTLIVPAKITDAGLCGANHANLVRRDVIDTYPIRIETAFNTGSDPTRKDILIAGVGDNVIGLGCFNDKGQCTGGIYDVMAGSSVAMSNNKLQLVANTTYVVNATFAEGGAVSLTIYESGNPSNRIDSFAQVSLKIRYVGIVVGGDKSYETCATYVNIVSPKGIIQDTFKNASQWMNIPAINRPLPTITKGVGACSDSLTSAILNTDITNGTTLHGMRTHVTTIFRTEISGVGATVIGKYAGGAVTVGCGQPDTKNSGYCNLGIRDSSGNYDISSSVSIAVGYWYKVDVTFSEESVTADLSIVGHGDLIASLRFFPGYAFGEFGIEVGGIADGKLSCLASYQVERRSFALGAPPRIPLIPGFVSNYSDSLASPSRSAWTSIPIFSADSTVPPVYAGGSACGRNMSIAMLTAAIFPSDNDIRATMDIFLDTSAGAKQIDSYQVGFVATTREGDASLLEGQIIATTLKGQRSTSDSFLKAESVATDTTTSSKVLPLPLNGDRFTLQVTFNSWGARVALTGGSQQSGMQLNGRFYKWSSLGILLQGGVCVDNVVVEIVSYDNGEASTRIAGDDFSTTSTGAIAPSAKWQKPTNIF # PASA_UPDATE: g3686.t1, single gene model update, valid-1, status:[pasa:asmbl_43,status:3], valid-1 NODE_1011_length_14747_cov_44.282 . gene 4329 9245 . + . ID=g3686;Name=g3686.t1 NODE_1011_length_14747_cov_44.282 . mRNA 4329 9245 . + . ID=g3686.t1;Parent=g3686;Name=g3686.t1 NODE_1011_length_14747_cov_44.282 . five_prime_UTR 4329 4413 . + . ID=g3686.t1.utr5p1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 4329 4617 . + . ID=g3686.t1.exon1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 4414 4617 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 4958 6890 . + . ID=g3686.t1.exon2;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 4958 6890 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 7235 7434 . + . ID=g3686.t1.exon3;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 7235 7434 . + 2 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 7795 7833 . + . ID=g3686.t1.exon4;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 7795 7833 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 8088 8129 . + . ID=g3686.t1.exon5;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 8088 8129 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 8497 8598 . + . ID=g3686.t1.exon6;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 8497 8598 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . exon 8886 9245 . + . ID=g3686.t1.exon7;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . CDS 8886 9095 . + 0 ID=cds.g3686.t1;Parent=g3686.t1 NODE_1011_length_14747_cov_44.282 . three_prime_UTR 9096 9245 . + . ID=g3686.t1.utr3p1;Parent=g3686.t1 #PROT g3686.t1 g3686 MAATYYACVLLCAALGLAMVPSSTGTMQYNATGGSKEWAVPMAWSRDGKAAGGALPCSGDAVSIDGNIQKGTVVNVYGRARSGSLVINAAELVIVAGGSLQIFPDGPSGNAVPSADTLCSTNTTVATLPTIVGPIVPQTLYKIEYESPLNIVVTRDSFSDANGETLKFDIAGVTVNGAASSREWWTFNRTSLAITGTPRAPDTLGDYVFTLRVSNSAGSVTGKVNVTLYRTLVCPCKNRGACTTYNDKCNCSVGDLGFTGPTCEDSCRPMMWGSDCRLNCNCNVAGTESCEGSSQACNCRIGFRGALCDSKIPPNITSIVENLKTAALLSFNATVRTFGWNSTVEVVCLSFSQGREPSCKAGVTFQFPVVGSPEISVVPITYTNLVASLEHQFSLQTKSEAGAGTGMSIEMMTSGPTKPSAPKLLCAPDSNMVKVTIEMDNSHGLIDIVRIEREVLLEGLPTSSIKRGFPRSEFGNSSVKTGDVETWVYMDASTAPKTTYRYTTTIVNVAGESSTSSVITTADTVASASGSSGSSSVVGSVVGAIFGVGFLACLGAGLVWYLRRKRKQKANDLARTELALIETVSARPEIGELEVFESLLKLLSKLGEGEFGLVHQGVATIRDEKVTVAVKTLKINPNLPSEETLSARSAFMAEIDLMRTVPPHPNVVHMLGVVTLSTPNRIILEFCDLGDLRSYLLKHSESLDDGQLLKLARDCCSGMAHLESLHIVHRDLAARNCMIKSAGADGGISLKIADFGLSRSVSDSDYYRVRTRGKLPVKWMAIESLEKRVYTHASDVWSFGIVLWEMWSRGCKPFVGIENQNMLAALKSGRRLDIPDNCPKPIYSQLMEPCWKKLPETRPKFVELTRLLTKFQSEGFGSAGGAHTASAAPVAVDTYAVIDVTANPTYQEY* # PASA_UPDATE: g12666.t1, single gene model update, valid-1, status:[pasa:asmbl_4920,status:3], valid-1 NODE_2744_length_5259_cov_41.776 . gene 2760 4632 . + . ID=g12666;Name=g12666.t1 NODE_2744_length_5259_cov_41.776 . mRNA 2760 4632 . + . ID=g12666.t1;Parent=g12666;Name=g12666.t1 NODE_2744_length_5259_cov_41.776 . five_prime_UTR 2760 2908 . + . ID=g12666.t1.utr5p1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . exon 2760 3011 . + . ID=g12666.t1.exon1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . CDS 2909 3011 . + 0 ID=cds.g12666.t1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . exon 3218 3278 . + . ID=g12666.t1.exon2;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . CDS 3218 3278 . + 2 ID=cds.g12666.t1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . exon 3466 3644 . + . ID=g12666.t1.exon3;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . CDS 3466 3644 . + 1 ID=cds.g12666.t1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . exon 3789 4176 . + . ID=g12666.t1.exon4;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . CDS 3789 4176 . + 2 ID=cds.g12666.t1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . exon 4412 4632 . + . ID=g12666.t1.exon5;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . CDS 4412 4535 . + 1 ID=cds.g12666.t1;Parent=g12666.t1 NODE_2744_length_5259_cov_41.776 . three_prime_UTR 4536 4632 . + . ID=g12666.t1.utr3p1;Parent=g12666.t1 #PROT g12666.t1 g12666 MDFLSLIDEDDLYTILNQAIRKPYLADPSYLLLIDVRSEGEYSDLHVIAALRAESDDESDALAPPRGVTPSMMAYVVLYGDKVPTKGDPSKHPAFPLAELLATEYGVESVSVLDGGFDVFCRKYPFLCDTKTSYTQKELDALKTYPSIALPFERLGDASTDDTTVSRSRSSSKKNVAEGDGAAPDTLVSRSRSASRTSVGSARTRAVLHPLYIGNSTHAHDRELLDMLGVKAVLNATKEFQRSEFPGMAYLGVPLEDEVHVEIMSKFDETFKFIGECECVFAVV* # PASA_UPDATE: g12665.t1, single gene model update, valid-1, status:[pasa:asmbl_4922,status:3], valid-1 NODE_2744_length_5259_cov_41.776 . gene 326 1838 . - . ID=g12665;Name=g12665.t1 NODE_2744_length_5259_cov_41.776 . mRNA 326 1838 . - . ID=g12665.t1;Parent=g12665;Name=g12665.t1 NODE_2744_length_5259_cov_41.776 . five_prime_UTR 1745 1838 . - . ID=g12665.t1.utr5p1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . exon 1697 1838 . - . ID=g12665.t1.exon1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . CDS 1697 1744 . - 0 ID=cds.g12665.t1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . exon 1494 1547 . - . ID=g12665.t1.exon2;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . CDS 1494 1547 . - 0 ID=cds.g12665.t1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . exon 1299 1377 . - . ID=g12665.t1.exon3;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . CDS 1299 1377 . - 0 ID=cds.g12665.t1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . exon 1033 1170 . - . ID=g12665.t1.exon4;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . CDS 1033 1170 . - 2 ID=cds.g12665.t1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . exon 326 621 . - . ID=g12665.t1.exon5;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . CDS 350 621 . - 2 ID=cds.g12665.t1;Parent=g12665.t1 NODE_2744_length_5259_cov_41.776 . three_prime_UTR 326 349 . - . ID=g12665.t1.utr3p1;Parent=g12665.t1 #PROT g12665.t1 g12665 MKSAVILISGNGSNLQAIIDAVASKRLPLDIKLVISNRKDAFGLTRAKNANIPTHYAPLKPYKDAGKSREEYDTDLAGVLKEHTPDLVILAGWMHVFTPTFFDKYTSTVINLHPALPGEFDGVDAIHRAYNASREGKIKRTGVMVHKVTPVVDHGEILGVREVPIHENDTLADLEARMHATEHVLLVDTLCSIASA* # PASA_UPDATE: g5044.t1, single gene model update, valid-1, status:[pasa:asmbl_4261,status:12], valid-1 NODE_2414_length_6372_cov_92.2379 . gene 2 1181 . + . ID=g5044;Name=g5044.t1 NODE_2414_length_6372_cov_92.2379 . mRNA 2 1181 . + . ID=g5044.t1;Parent=g5044;Name=g5044.t1 NODE_2414_length_6372_cov_92.2379 . exon 2 226 . + . ID=g5044.t1.exon1;Parent=g5044.t1 NODE_2414_length_6372_cov_92.2379 . CDS 2 226 . + 0 ID=cds.g5044.t1;Parent=g5044.t1;5_prime_partial=true NODE_2414_length_6372_cov_92.2379 . exon 337 1181 . + . ID=g5044.t1.exon2;Parent=g5044.t1 NODE_2414_length_6372_cov_92.2379 . CDS 337 600 . + 0 ID=cds.g5044.t1;Parent=g5044.t1 NODE_2414_length_6372_cov_92.2379 . three_prime_UTR 601 1181 . + . ID=g5044.t1.utr3p1;Parent=g5044.t1 #PROT g5044.t1 g5044 EDDDWEHYLQVNLMSSVRLSRRYLKEMLARNSGRVIIISSESGVRPIPFTIHYSVTKTAQIGLARGLAELTKGTKVTVNSVLAGPTWTERIEEYITGLATHKNKSVEQTASDFFTELEPTSLLQRFIKSEEIASIVTFLTSEHASAINGSAQRVEGGIIRAI* # ORIGINAL: g5046.t1 original gene structure, not modified by PASA NODE_2414_length_6372_cov_92.2379 AUGUSTUS gene 5669 6151 . - . ID=g5046;Name=g5046.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS mRNA 5669 6151 . - . ID=g5046.t1;Parent=g5046;Name=g5046.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS exon 6120 6151 . - . ID=g5046.t1.exon1;Parent=g5046.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS CDS 6120 6151 . - 0 ID=cds.g5046.t1;Parent=g5046.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS exon 5669 5867 . - . ID=g5046.t1.exon2;Parent=g5046.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS CDS 5669 5867 . - 1 ID=cds.g5046.t1;Parent=g5046.t1 #PROT g5046.t1 g5046 MLKQRHQALKADAIKQLGAETYEKVYKYLRQVRSGGKGTKEAEIVAKLGDIAGKKKVDACFIVEQLVMSEIMSAKK* # ORIGINAL: g5045.t1 original gene structure, not modified by PASA NODE_2414_length_6372_cov_92.2379 AUGUSTUS gene 1254 4898 . - . ID=g5045;Name=g5045.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS mRNA 1254 4898 . - . ID=g5045.t1;Parent=g5045;Name=g5045.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS exon 1254 4898 . - . ID=g5045.t1.exon1;Parent=g5045.t1 NODE_2414_length_6372_cov_92.2379 AUGUSTUS CDS 1254 4898 . - 0 ID=cds.g5045.t1;Parent=g5045.t1 #PROT g5045.t1 g5045 MIRSYVSSFFGGASASPAAAIATTGDGSASYSHLDLDYITARIVVAGRPWRGRTEKANHKNNIGELSSYLSTAHPGRYMLWNLAPYDEKDLRYDTGAFDHQVIDFDASLSSPRLDILLGVCHTIRGWLNVHPDNVAVLHCTNGLVQSGIAVACYLQYDGTFDSAVEAFEFYKEQRKNVSGAIPDVLLRYLIYFTMCLRGPLLNDEPLVLQNVMVHTAPDIADWNPELMIHQNGKLVFSTLDGDPDHHRNVPDRYTAIFHTRSQICGDIVVTCIHRPTHVDGDVTVFQYAFNSGFCSSQLPELKRIQQSHLSISSSVAQKLSPEFCVDFQFMAAPAAVSRDCDGGSSDEDEGSHLPPKLTYLTRPTPEECLQLLVGMHAVVPAGSLLDDLMEATHCTETRAVLALQLNNNNAERARAFLLAPPPSAKAKSTGVAGNAERVEEDGRGAMDGAVMHADKDATAPDAHSSAHTDAHADGLIVSAESEETKGRGNSVGYDISNVMIVTGQSIDDFLSGQQLDASYLELLGGIGGNTESNDDTDIPPKSVREAKVDKGRHVAEKLRKRKKSQATLNVGNAVGTDGSAGTESDFVERVRRRFGRLSDGSLRAIANGEYLSEDTDEKSSIASETTTTTSGRITPTDGVSAGPPPPPPPAMMSMNGGPPPPPPPPGMGPPPPPPPGMGPQGVNISRPTKTMRNKLHVSRLPQHKIQNTIWAAAGIGSAMEDDERKRFEELFCATPTRPGKLDAGGGGDTNTSGSGAKKAVNILDLRRANNVSIALARFDKRLSDADIRRAILAMDATILSLDDLHSLRRIMPTAEELQQMRMYKGDASFLGRAERFFLEMDGATAGNKKKGGMDADVAGDGLDLSAAVDAFVYKCEFAQQVTSVRDRAKCVIAACKEVRESASLKTLLGAVLRVGNLASEYAPGARGGGGGSSGLRGVTIDSLIKFRELKSPRDNRTTLLDFMVELLSQATKSTPSRVTDSGPKTDADKTAPLSNQPSIPAHVLAPQDAPSSSAVVASSAAGLVSPRTADPLNAQAELVHVALARSIEVPALEQDARKLETGLMSIRASFLRRQTPVGLVIGGGGGGKGKKKSGKRDAEEGFIDLIRAFVSQAEREASQALTAVDDLRRQFASAAVFFGEDPDAITPESFFNTLYAFVAAVSDANRRREEILAREAAAALAVSSGVTAADGGRKKSVVFGKKATTKRPPEATK* # ORIGINAL: g2708.t1 original gene structure, not modified by PASA NODE_6947_length_488_cov_47.0702_potentialcontaminant AUGUSTUS gene 22 401 . - . ID=g2708;Name=g2708.t1 NODE_6947_length_488_cov_47.0702_potentialcontaminant AUGUSTUS mRNA 22 401 . - . ID=g2708.t1;Parent=g2708;Name=g2708.t1 NODE_6947_length_488_cov_47.0702_potentialcontaminant AUGUSTUS exon 22 401 . - . ID=g2708.t1.exon1;Parent=g2708.t1 NODE_6947_length_488_cov_47.0702_potentialcontaminant AUGUSTUS CDS 22 401 . - 0 ID=cds.g2708.t1;Parent=g2708.t1 #PROT g2708.t1 g2708 MRKFDGTSKRYRLGGGQPASTASDQAASATSADYDRLTASAERPAEDMYGKWKRSVRVMGGDESVASDWNVQFLMIKRKHSYAFQQSVNGLFHENNTEYLKTLVWSMRAEERQKIVSQTFEELWRD # ORIGINAL: g10896.t1 original gene structure, not modified by PASA NODE_384_length_25162_cov_39.1795 AUGUSTUS gene 18381 19832 . + . ID=g10896;Name=g10896.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS mRNA 18381 19832 . + . ID=g10896.t1;Parent=g10896;Name=g10896.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 18381 18561 . + . ID=g10896.t1.exon1;Parent=g10896.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 18381 18561 . + 0 ID=cds.g10896.t1;Parent=g10896.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 18790 19832 . + . ID=g10896.t1.exon2;Parent=g10896.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 18790 19832 . + 2 ID=cds.g10896.t1;Parent=g10896.t1 #PROT g10896.t1 g10896 MAEILKSFKRSLSGNHEDGEEIDTFESTPRRKSSLFGRKSAIEEYAAFDEGKPAEEYHERRRSGSFSKTEKYQRSSIETPSDMPVESLEERRRSSVEYSSTVKYPPTPTSIVHLMYPPDSDSSGFGFILKRIKGGIFVSCAMMGSPAAECGVSFGDEIVSVEKRSLGGIKAKKAAEILREFLAKQRGESIEGSASNSRSRSGSTTSQGDWGARRSGSIGNQGELRRGSSFSMQREPSVGENGKPFLELGIRRNPLEMVHEIKYQHEPLGIRFAGGRILDVKKGSPAERAGVKPLRFMTAIDGRVIVGLHDRDVFDRIKLGSGSGTLTLRTMSSKKYIKLTRKINRSNLRFGLDHSANEEDLRRRASFDEQLKERQIQQALKEIKLSSLEKAESLSYDDPSAGTGYEL* # PASA_UPDATE: g10892.t1, single gene model update, valid-1, status:[pasa:asmbl_6644,status:12], valid-1 NODE_384_length_25162_cov_39.1795 . gene 667 2475 . - . ID=g10892;Name=g10892.t1 NODE_384_length_25162_cov_39.1795 . mRNA 667 2475 . - . ID=g10892.t1;Parent=g10892;Name=g10892.t1 NODE_384_length_25162_cov_39.1795 . five_prime_UTR 1892 2475 . - . ID=g10892.t1.utr5p1;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . exon 1661 2475 . - . ID=g10892.t1.exon1;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . CDS 1661 1891 . - 0 ID=cds.g10892.t1;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . exon 1176 1312 . - . ID=g10892.t1.exon2;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . CDS 1176 1312 . - 0 ID=cds.g10892.t1;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . exon 667 709 . - . ID=g10892.t1.exon3;Parent=g10892.t1 NODE_384_length_25162_cov_39.1795 . CDS 667 709 . - 1 ID=cds.g10892.t1;Parent=g10892.t1 #PROT g10892.t1 g10892 MDKVLPSSQPKMWFVVDPCGIFCAIFTYALILYAEVVVMAYIIIPVGTPLMMLNGLIFNVFIALGIASHLRAMLSDPGTVALPPPDFIMERIERTNPIEVSGELVTNCLKCKNYKPHRAHHCSVCKRCVRRMDHHW* # ORIGINAL: g10897.t1 original gene structure, not modified by PASA NODE_384_length_25162_cov_39.1795 AUGUSTUS gene 21000 25071 . - . ID=g10897;Name=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS mRNA 21000 25071 . - . ID=g10897.t1;Parent=g10897;Name=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 24863 25071 . - . ID=g10897.t1.exon1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 24863 25071 . - 0 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 23871 24041 . - . ID=g10897.t1.exon2;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 23871 24041 . - 1 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 23454 23561 . - . ID=g10897.t1.exon3;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 23454 23561 . - 1 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 23175 23314 . - . ID=g10897.t1.exon4;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 23175 23314 . - 1 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 22884 22990 . - . ID=g10897.t1.exon5;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 22884 22990 . - 2 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 22449 22601 . - . ID=g10897.t1.exon6;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 22449 22601 . - 0 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 22042 22215 . - . ID=g10897.t1.exon7;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 22042 22215 . - 0 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 21290 21548 . - . ID=g10897.t1.exon8;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 21290 21548 . - 0 ID=cds.g10897.t1;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 21000 21175 . - . ID=g10897.t1.exon9;Parent=g10897.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 21000 21175 . - 2 ID=cds.g10897.t1;Parent=g10897.t1 #PROT g10897.t1 g10897 MDRAHFRLVNMLITDSITFLMRSTDCHECAFQVAASDVPPRGTAEVNLLINFPLELRFSNPDGGDYPNDTRSVVNSVPFFASSSYDYEKLINTDLGVPDDTSASRPLGGEQEEENDGRLRSLDTFRGFSLAIMIFVNYGGGGYYFFQHSTWNGLTVADLVFPWFLFMMGCSMAISFESIHRRGTSTRKLILKILQRSATLFALGLFLNNGHDLGYWRIPGVLQRFGVSYMFVSLIVLFVPMVDTRFGPFQDITAHVLHWLVILILIAVHVIVTFLLDVPGCGRGYLGAGGLDMGGAYEECTGGAAGYIDRVVLGRDHIYATPTCMTTYQTTVPFDPEGILGCLTSIALTYLGYQAGRVIVIYSSHGQRLVRWLVWGVVTGAIGTLLCFGEKDGGPIPINKNLWSVSFILVMAGTGFCFLSLFYFVIDMRRWWIGSPWRFPGMNSIVVYCGSEVFQSYFPFSFKHKDTHAAELGSALLGVSTWVFISYVMYRKKIFVKV* # PASA_UPDATE: g10893.t1, single gene model update, valid-1, status:[pasa:asmbl_6645,status:12], valid-1 NODE_384_length_25162_cov_39.1795 . gene 4607 8622 . + . ID=g10893;Name=g10893.t1 NODE_384_length_25162_cov_39.1795 . mRNA 4607 8622 . + . ID=g10893.t1;Parent=g10893;Name=g10893.t1 NODE_384_length_25162_cov_39.1795 . exon 4607 4651 . + . ID=g10893.t1.exon1;Parent=g10893.t1 NODE_384_length_25162_cov_39.1795 . CDS 4607 4651 . + 0 ID=cds.g10893.t1;Parent=g10893.t1 NODE_384_length_25162_cov_39.1795 . exon 4933 7949 . + . ID=g10893.t1.exon2;Parent=g10893.t1 NODE_384_length_25162_cov_39.1795 . CDS 4933 7949 . + 0 ID=cds.g10893.t1;Parent=g10893.t1 NODE_384_length_25162_cov_39.1795 . exon 8235 8622 . + . ID=g10893.t1.exon3;Parent=g10893.t1 NODE_384_length_25162_cov_39.1795 . CDS 8235 8622 . + 1 ID=cds.g10893.t1;Parent=g10893.t1 #PROT g10893.t1 g10893 MLATVTANIPHRFDEVVALLIDDLSRARDIADGRLESTRRCECLVRLSRLSRRCAHRIRDALMDSQVVASVVIAVTADSLPDTMTAFLCGALADPRSSQWLSAEMKRLPSASGFRADMGQCDLVFGAFAPRDDVVGSILHPLESMRSVMSMQGRVLVNALEAHAGSVCVCVGGIAGAVRDTVAGDADVDMVDLDGGAARAPTAVAMPLLARQCADYLRALSALTGIAGIALSESEAVVGVRVARLVAACTVIESSQTALSSLPGGDASRAWKTAAISGFCFALVCPRLLQMVGSAAVVELLEEYARPLIRLSSCDSNDDGVDVGASGALVLLVASHMVTGRGAAVVPDIVRRALALPAQLHADSLSRMSSAVTGVVPESLLVKVASRWPVTRQLRGPDRLSVRVPRSGSVAGEDSQDIDGIHCVWTLLSAGAFSRHGIPVVGWIMSQLRVCAKPLHPAIPSLIAALVKDITERVSSLVVLGVPPAPHTLRALADAIPEDDVVSVLRGGDETPLVLMNYYVLCLSRSLDRCATLALAGRSANGSAKNACLLPWHLPSYRLLYSERVTCALRPRLALGLSAPDVPQSSLEAVGGMSRAGAWGYEALYPSLSCVVAAECSECLDPASVLHERAHALARDSARLVVRSGVTCADVTCESIGSALCPGSVGSGNSDVSLLGAPSYPFPTSSENVAALLANASENPAPALAALRRVMCGGARAVADGRALFVPLIRSLMCGHVVRPVHDAFIAAWRMACTVDPHSVWAQTAGLLASTASTAPTVRFSQAASLGDSTIASSGASGASLGRPPHFGRRHVTGERAASHEDYCRDPVRCLAGADVRVFALPSLLSVLLSCTWGYIVMSRRCLLGAERADPQPHGMQGTRDGGSASAAVVAEDTHAMRLTLVQLQEAACVHIVIERCLRDSFHGGDSGVSADSSNMSDVGECRAIASAFVHRMFIADPLVARVVHTQGYALDALGHVVAGVPSMHLCLDFCDALVRSADSQVRRFGIALCGRLCKRYPIPRGLSLANACLEVVSTLASYEGIGVCDRVLPQQTCAVTHDTTVQVHVTPNHFTMEPAAYGTNAILGTRAEFRYLTDGVAACCEAYPSLAPAFVDALCALTVALRRSECEWASRDVSVAILSIADRVTDRR* # ORIGINAL: g10894.t1 original gene structure, not modified by PASA NODE_384_length_25162_cov_39.1795 AUGUSTUS gene 9368 12467 . - . ID=g10894;Name=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS mRNA 9368 12467 . - . ID=g10894.t1;Parent=g10894;Name=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 12363 12467 . - . ID=g10894.t1.exon1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 12363 12467 . - 0 ID=cds.g10894.t1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 11167 12139 . - . ID=g10894.t1.exon2;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 11167 12139 . - 0 ID=cds.g10894.t1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 10465 11012 . - . ID=g10894.t1.exon3;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 10465 11012 . - 2 ID=cds.g10894.t1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 10068 10163 . - . ID=g10894.t1.exon4;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 10068 10163 . - 0 ID=cds.g10894.t1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 9766 9858 . - . ID=g10894.t1.exon5;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 9766 9858 . - 0 ID=cds.g10894.t1;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS exon 9368 9538 . - . ID=g10894.t1.exon6;Parent=g10894.t1 NODE_384_length_25162_cov_39.1795 AUGUSTUS CDS 9368 9538 . - 0 ID=cds.g10894.t1;Parent=g10894.t1 #PROT g10894.t1 g10894 MPRPPAVQAIICVQTARSRASRVPAEATAPATALRDICPIGFYGVVGALYDSGAADASFDWRGVTHASWAFAVLFVVLCLLAIIRKVRSAFFRSVDVAYDYSHRVDDGTPLSREKKWCGGLALLLALACIAMLFYLYADLYANGDGRTSIGLVDDVMLQGAGYPSVPFGLNVAVVATLSAPFVCVPTVGAAGLNGHPSVSAQAQLSNASCAFDVICEGCSVIAQQAMTQPVTTTSPSASIATDAACLTVSLGGNTSISALVMSFSLMSSAGNEVQRLFSVVAAAGDVGTHPPLDADANSTSAVAAAGLAGGVSLATRRFVVDHYMSTRKRTGLRVSGVSWGATPTLPGCATIAGVNATTGVFFISIDAGSLTSYERVQRADTPQTLAAQCIATAVGLLIIVAYLMRLAETASRSIAHQKSPSAKYLSAAPPEDETVKRGSFYVSRRLNASLGSVNAFSEPLHDAPSSAFADGRSALNRSYTASMAAALNGPDGSNAKLTRQQTRDRLAAMNSGTAPRVETLEDAMDLLGKDRRAHNRPSELRAMNDTQMYEERLAIKTILFEYETGFKDRRGRELTKSEKEHMRPLYRRYRSLKVTGPDTAAIDEEAQSASARWRIAAVKGRGPAVNTFNPTTLKAAQDIYAEELREMKVLDSVITIETQL* # PASA_UPDATE: g10895.t1, single gene model update, valid-1, status:[pasa:asmbl_6646,status:12], valid-1 NODE_384_length_25162_cov_39.1795 . gene 14718 17708 . + . ID=g10895;Name=g10895.t1 NODE_384_length_25162_cov_39.1795 . mRNA 14718 17708 . + . ID=g10895.t1;Parent=g10895;Name=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 14718 14873 . + . ID=g10895.t1.exon1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 14718 14873 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 15063 15185 . + . ID=g10895.t1.exon2;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 15063 15185 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 15447 15578 . + . ID=g10895.t1.exon3;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 15447 15578 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 15864 15913 . + . ID=g10895.t1.exon4;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 15864 15913 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 16215 16416 . + . ID=g10895.t1.exon5;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 16215 16416 . + 1 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 16703 16873 . + . ID=g10895.t1.exon6;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 16703 16873 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . exon 17103 17708 . + . ID=g10895.t1.exon7;Parent=g10895.t1 NODE_384_length_25162_cov_39.1795 . CDS 17103 17708 . + 0 ID=cds.g10895.t1;Parent=g10895.t1 #PROT g10895.t1 g10895 MSKDERSPLLDNLLDQSGEDVAPPLTKWQAFYKKFFIHILVAWLVVITVTEKVLAKVMTNRLENYTYFLTQLLSLVYIPIMFGVVWYKQRNTNEITEAMLRYPKWKYFIMAIFDALAGLAMVVLPHMSGPLVTLLQQSTVPVSLIMSVLILKKRYRWSHYLGAAVIIVGIILYLLPQLINPSKDDKENARDSNLPLYATLLFASSIPAVGGKIYQEISLKQEMNVYLLNGWVALFQFFIGLPLAPLFFKVQTPSGDLSHLGENLRHSFGCVFAGVNYEETDQCSYGILFFVIYIGLNIAFNIVMTYVLLYGSAVLVFIAITIAVPFTYFMFSWDVVEDPPLSITGYSIGGLLVTVAGLVLFYWKREPEPEIHQDTEAILADGGVSTINADEQSDTMSSANLPRFASSVPQRSGSMASVNGPHSPGASLSRGRSGSISPTRELLTRSWSGTGRMMVVDGMEQQRIERPSSLSGSRPSSFR* # ORIGINAL: g6867.t1 original gene structure, not modified by PASA NODE_835_length_17115_cov_42.4692 AUGUSTUS gene 15092 16940 . - . ID=g6867;Name=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS mRNA 15092 16940 . - . ID=g6867.t1;Parent=g6867;Name=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 16539 16940 . - . ID=g6867.t1.exon1;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 16539 16940 . - 0 ID=cds.g6867.t1;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 16268 16360 . - . ID=g6867.t1.exon2;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 16268 16360 . - 0 ID=cds.g6867.t1;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 15825 15983 . - . ID=g6867.t1.exon3;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 15825 15983 . - 0 ID=cds.g6867.t1;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 15092 15232 . - . ID=g6867.t1.exon4;Parent=g6867.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 15092 15232 . - 0 ID=cds.g6867.t1;Parent=g6867.t1 #PROT g6867.t1 g6867 MIRWLDRLEEKRKEMNGKGAVNSADVGTSGNTDNVQHPQQQQQQQQDAKLADDVSAPRKSAPAPATVFSVDLTPSPSMSSRKAKDEQNAKDLAASGSVSVPKATCSRCGTVEEAVLLLKAEFASLEEEIGVKDEVIALLHAKLNRRRDGPSSSPVPLTGSANILQSRILALEELVASKETERTHLGTQFSLANRWLEAAMEEIALQRDRIQALEAKSQKRDATSDLRAEVALLTTQLSAAHEACMAHQSHSALLGSEITRVRAV* # ORIGINAL: g6865.t1 original gene structure, not modified by PASA NODE_835_length_17115_cov_42.4692 AUGUSTUS gene 3726 7565 . - . ID=g6865;Name=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS mRNA 3726 7565 . - . ID=g6865.t1;Parent=g6865;Name=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 7199 7565 . - . ID=g6865.t1.exon1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 7199 7565 . - 0 ID=cds.g6865.t1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 6954 7043 . - . ID=g6865.t1.exon2;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 6954 7043 . - 2 ID=cds.g6865.t1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 6620 6656 . - . ID=g6865.t1.exon3;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 6620 6656 . - 2 ID=cds.g6865.t1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 5536 6319 . - . ID=g6865.t1.exon4;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 5536 6319 . - 1 ID=cds.g6865.t1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 4026 5172 . - . ID=g6865.t1.exon5;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 4026 5172 . - 0 ID=cds.g6865.t1;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 3726 3889 . - . ID=g6865.t1.exon6;Parent=g6865.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 3726 3889 . - 2 ID=cds.g6865.t1;Parent=g6865.t1 #PROT g6865.t1 g6865 MRRSSRLTRPEPSATAAAAPQPTQPAAKRARLDDVKVDVDGATKPKAKPKVRRTRGVASRLHSHTESPSRDAEVVAGARIDSASDVAVEEPVVPAQPKMKHVVFVIHGIGEQINTTPSLWDNVEKIEKSARELVDAHLLSSMNSVDVKFIPIEWHSSVRETDNARKMGLITLKTVPWLRRLNNDWLGDILYYLCDGVKILRDVVGKLNAGYSGFLADNPGFEGTFSVLAHSLGGLISYDILTGNIPAETSHSLRGSTYPRGQMRKPRRHDHVTPKAEVATETDACEHTPDTRTRQQHDVFALGTDVGGIASRHSEAESEAIATTGNAHSATTHGTTPLSRNTSTSPPSRLRSATAGEHSEVHGAEGAPEAKGTTPPDALDFGLDFTPAHLFILGSPLAGLLVFRDTPFESIPGCRVHNVFHPYDPLGYRLEPLINPEYADISPVILPHWNGGKRLHLLIRETYASRLQPLLPSVSSLSASLMALPASLQVPSFPRLEMPSLEMPRLDIGGISPADAKRRLGTFFVESMAHISDYLPPVHQRMADVAHATANYYSTEHIVEHVNEARRSLKRKFAALMELVSGPGVDATDAAVGSAENEVSAQVKSTPRKRRRTSRRPLARTKRPPRAGGAAGHVASGPATDVSDVSELPHAPDARTDGRPKRGSSCPPHVGLSRSNNAHEISTNTRNIRGGSVVDDAEHDALSGTDAIATALEYAEAAESSPVSADGFVRRASERVRVRVQRRAVGRGVSPSHGGRSRDASTGGLIGGVIVDGDGAVDVDLEEEPTSVRVKHEHLLAAPEEGQQHGPRVPPLDGHPRMDFSLQEHPMEIGSEYIFSVGSHASYWANKDVTLYVLATVCARVR* # PASA_UPDATE: g6866.t1, single gene model update, valid-1, status:[pasa:asmbl_9609,status:12],[pasa:asmbl_9610,status:12], valid-1 NODE_835_length_17115_cov_42.4692 . gene 8760 14668 . + . ID=g6866;Name=g6866.t1 NODE_835_length_17115_cov_42.4692 . mRNA 8760 14668 . + . ID=g6866.t1;Parent=g6866;Name=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 8760 9277 . + . ID=g6866.t1.exon1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 8760 9277 . + 0 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 9552 10472 . + . ID=g6866.t1.exon2;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 9552 10472 . + 1 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 10761 12892 . + . ID=g6866.t1.exon3;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 10761 12892 . + 1 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 13177 13415 . + . ID=g6866.t1.exon4;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 13177 13415 . + 2 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 13587 13726 . + . ID=g6866.t1.exon5;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 13587 13726 . + 0 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . exon 14186 14668 . + . ID=g6866.t1.exon6;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . CDS 14186 14480 . + 1 ID=cds.g6866.t1;Parent=g6866.t1 NODE_835_length_17115_cov_42.4692 . three_prime_UTR 14481 14668 . + . ID=g6866.t1.utr3p1;Parent=g6866.t1 #PROT g6866.t1 g6866 MAQSGRFPVGDAWQETPRSHNEVDRSEDPTAIALDEIVDSPDGDAHSSADADVPRPESHTQSTGDESVELDSYELNAQLMQFVTPSVEFRYQQSRTGAWAIAERVQLVVAFIYIGLFFIFALNGTFGDTVEQQEDYKKNVWVQGLAAGFLLCLLILSMRKVYPDWLYVNPRRRFLVFYGMVAAIGSMIIVPRAMVNDGTSSGGTMLLIMSTCACLELYINALMAVIVIVFTLLIQFVFLSDSDFSRVITAFLPIAVMAAYPMMALYQIDSQFRKRWLAQRTVDARRESLVRENDQMESLLRLQLPEPVIARLKVAAGRHTMAQRIHCVTVCFVDLEGWGDATRTLDPGVAVSALNELFSRFDEVVEDLNVEKIKTIGPVYMIAGNVPDALADHTAVVTKFGLVLLRTFADVRGGVIAAAPRMSIEFDANDEQATRAALATMFEEVKLKIGVNVGEVVAGIVGDLKFCYDIYGDTVNTASRMCKFGEVGRIQCTEAVRDALVKSPMAPLFSITSAGVKTFKGKGEMETFFVDENSEHPIGIADDPSDALHVPAAPALASVSVRAAAALPIPRSGEVIPSILDGGLISSKTLAGLANTTNATNHEPSKDGYEEYNATAEELVDAFPMREFRRAGPDSQHRRRRQSVAMSITLRRIAADMTPRSHADPSSPHGTSSQSKSTLGSGVVSASGTFVRPRRGSKPQESPLVPSGVSASTSTMDSPNGSSVRAVARRSEATTMSATDSRRGGSKGSSAEASRRSSGISGLDTDAAIHNMGSSAAVGGGLNLSRMDIDVLIDGGTAMDNESGPGSAWALAFTSASPTSSVRANNSEKNNNNNTNNNNNSGSTRKSATVRESVRESMRGRRSARDHLASDTMTSFLHKEEHMQAIEGLGGARMGKYTLRFNITELENAFRAEFTGQGRNSAIFYFLLNFAVLAVMAVIDLMGDEEPSRKASLLAVRFVVGAFVCFVPASLLHFGRQRLSPIAIEVIALGGTISCCGLMIALALANRSVYNSVYCTFGVLFLLVGGTLIALPIMQFYVSVIVGISTAFVFFGLLFVGVFSGTLSQYSFGLGGMVLVCATRHMYDRQLRQAILLKAVRVEQERELVVQKELGEQLLHNILPRSVALMLAAEPGCNTARFFPSITALTMDVVSFTLMSSEMNALAVVAMLNSLFSKFDTLVKALNVEKICTIGDAYVAASGLPDPCLDHAMRMCMLGVGMLNVASKVKAYSSGSRDGEEKRPVGLGPPQGRPISIRVGIHTGSCVAGILGGKIRFKYDIYGDAMHVAGALEQSGVPMALHVSKATLDQIDTHELVRRHRAMIEPRDNPLHVHVSGVDELLDTYILRFPDIAGERPAEDKSGKPTLSRLSTKLSMRGHPDTSPLLERHEIAPSSQIINLDDEVNALLGDRSTNDLSG* # ORIGINAL: g6864.t1 original gene structure, not modified by PASA NODE_835_length_17115_cov_42.4692 AUGUSTUS gene 251 1431 . - . ID=g6864;Name=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS mRNA 251 1431 . - . ID=g6864.t1;Parent=g6864;Name=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 1378 1431 . - . ID=g6864.t1.exon1;Parent=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 1378 1431 . - 0 ID=cds.g6864.t1;Parent=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 736 1112 . - . ID=g6864.t1.exon2;Parent=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 736 1112 . - 0 ID=cds.g6864.t1;Parent=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS exon 251 321 . - . ID=g6864.t1.exon3;Parent=g6864.t1 NODE_835_length_17115_cov_42.4692 AUGUSTUS CDS 251 321 . - 1 ID=cds.g6864.t1;Parent=g6864.t1 #PROT g6864.t1 g6864 MSRTSSEDLPLGVVSPLKRDKRRSLTDEINSFRGSTLPRDTPGRYSPRRPRVRLSPHRTVSNTGFKEAPLLIPSSPIYYDALSSTLGPVFTRHPATMESIEHINFDPISADGLSRTNTLAKVHLDGKGLLVHRTVGTLVYGKRRLVQLDSNADINTCLRELDSYNIL # ORIGINAL: g6947.t1 original gene structure, not modified by PASA NODE_444_length_23650_cov_42.5198 AUGUSTUS gene 19172 23589 . + . ID=g6947;Name=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS mRNA 19172 23589 . + . ID=g6947.t1;Parent=g6947;Name=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 19172 19375 . + . ID=g6947.t1.exon1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 19172 19375 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 19793 19909 . + . ID=g6947.t1.exon2;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 19793 19909 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 20228 20701 . + . ID=g6947.t1.exon3;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 20228 20701 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 21037 21111 . + . ID=g6947.t1.exon4;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 21037 21111 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 21386 21616 . + . ID=g6947.t1.exon5;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 21386 21616 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 22007 22108 . + . ID=g6947.t1.exon6;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 22007 22108 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 22836 23057 . + . ID=g6947.t1.exon7;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 22836 23057 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 23327 23399 . + . ID=g6947.t1.exon8;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 23327 23399 . + 0 ID=cds.g6947.t1;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 23576 23589 . + . ID=g6947.t1.exon9;Parent=g6947.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 23576 23589 . + 2 ID=cds.g6947.t1;Parent=g6947.t1 #PROT g6947.t1 g6947 MQVLAAVLNPFGIFKRRLRPPSLGDFNSGDFGSDFEGSGLHDEKSFPENVMPAGFDRPLSKRLDGQQEDSASYLAAGNGYIKLVGKFNDPIRRIAVEMHPDMTITESALSEVERRLFALLGLVFNRPRFGFVDVTLFLQTTFPNELHRWIIPAGEEAVMLFRKGPKNIKLAFAAATSFPASNIRRWLLEKFPFAEADPENVVYMCAVLEYITTDLIKMAGDYSTNNQNTTKEITAKDIEKAIAEERVLNELFSLVEPLAPCLSHVSAANVLKAMYVCQQQYMHTLQMIVWVFLEAFKALSPIVLQSGQQRNIVHSIFNNIEEVYEFEKEFFASLKNAYAGAAVSGSTEAEGAERLSLVSRCFADYALSLVDVYSSYIESMPQTTAAVIDKVMLRVTTARIQILQQCTASSAGPNVKEDSTNLRDVEAMLHSKHEETKSLLAALMGTAYRPSKMKRVDKDRLAEIQGQISGGGTLACLEIFASVTELLQNARLLVKVSKGVDGK* # PASA_UPDATE: g6944.t1, single gene model update, valid-1, status:[pasa:asmbl_7331,status:12],[pasa:asmbl_7333,status:12], valid-1 NODE_444_length_23650_cov_42.5198 . gene 5864 10776 . - . ID=g6944;Name=g6944.t1 NODE_444_length_23650_cov_42.5198 . mRNA 5864 10776 . - . ID=g6944.t1;Parent=g6944;Name=g6944.t1 NODE_444_length_23650_cov_42.5198 . five_prime_UTR 10457 10776 . - . ID=g6944.t1.utr5p1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 10187 10776 . - . ID=g6944.t1.exon1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 10187 10456 . - 0 ID=cds.g6944.t1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 8365 9829 . - . ID=g6944.t1.exon2;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 8365 9829 . - 0 ID=cds.g6944.t1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 7904 8010 . - . ID=g6944.t1.exon3;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 7904 8010 . - 2 ID=cds.g6944.t1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 7448 7538 . - . ID=g6944.t1.exon4;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 7448 7538 . - 0 ID=cds.g6944.t1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 6600 7081 . - . ID=g6944.t1.exon5;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 6600 7081 . - 2 ID=cds.g6944.t1;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . exon 5864 6358 . - . ID=g6944.t1.exon6;Parent=g6944.t1 NODE_444_length_23650_cov_42.5198 . CDS 5864 6358 . - 0 ID=cds.g6944.t1;Parent=g6944.t1 #PROT g6944.t1 g6944 MAAHVHMNTASFERILAPVAAAIGELILMEEEAALEDQPMPDLTPVASAIEASISQLTGIASKATTTSTDDAMRADMPEAVALLEEAAAMLSTAARTLRDSPTDATARQWLPQAAKGILDGTCRVLTVFDETEVRRILAACEAAKQALARLASARTIAELAASLKEATPTLVAMSKLAEQRAADLMEPRPKAMLRDAAAAVRRTTPLVVSAVKLAIQSAGSDSASQSRDAAAAGLSKLIGEIETASRIGADQPAEPHVPTHDHDGNDGSHVTPHVSHGHDEAARIAAAVAGVECASGEPSLSNAFSTAREDVIGIAEELHHQAHDGQEGSDGTVSAAVASFEASATQLVKAASAFSADVQTPTSRTAIASAAALVSERIAAVKEASAEIDRIRHEEDLARAAAGEATAHGHVTEASESEVAAVDRLKEGLLSADAACARLEAEVGRALLRDIDATAEAARAPLSGMSLAIRAGDKGECAAQAKTFAAAMSHVTAAAAKAAQHLGGDSEGAHRMKAASASLQMLSPQIVAAGVASAEKGGAGGTKEHFDMLVKEWSAGIAAIADSVEEGVRADVVVGVRAESIRTDIDTLKSVAVANDRMMMGAVASSLGNHVGQAITSAKKEASGSHDPQFVASVASAAASLERAHKHLAEAVAAPSASTPDAFEPQSDAVDAAVVALHTAVATRGRAPTITTSSAPTSTADDDIPAANNSGTGLSVPGDASPRPASPIPTVGLESERLSELLSTATLSPAPSKEEIRAMPTETGAGVVAGTAAVEAEEEEEEAHDAQPPIQVMTAEEIKQNPIKAAAQELQVETLKWDAKDNDMIATAAKLSALMTQMADHARNASKRELVQTAQTMAVNMSLIENMGRDIAERCTDKRLRNALLVLLDRVPTMTMQLKVISSVKAASPRDDGVDAQLVVCARNLMSTVTGIVRATESASICVMPSDMDGKQTLKWRRKGRGNRRANQ* # ORIGINAL: g6946.t1 original gene structure, not modified by PASA NODE_444_length_23650_cov_42.5198 AUGUSTUS gene 15366 16839 . - . ID=g6946;Name=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS mRNA 15366 16839 . - . ID=g6946.t1;Parent=g6946;Name=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 16614 16839 . - . ID=g6946.t1.exon1;Parent=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 16614 16839 . - 0 ID=cds.g6946.t1;Parent=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 16012 16457 . - . ID=g6946.t1.exon2;Parent=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 16012 16457 . - 2 ID=cds.g6946.t1;Parent=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 15366 15779 . - . ID=g6946.t1.exon3;Parent=g6946.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 15366 15779 . - 0 ID=cds.g6946.t1;Parent=g6946.t1 #PROT g6946.t1 g6946 MDWHMVERALGNFETVFGPDSSPCLHKDGKRVTPKECLANTPVGSLLFRKSHLIEINAKDNLDTVLRRFEAFNLKCAPVYDANKLEYVGIISTFDIMVFVAFGFFKNDDNEVTKDLLAERRAHVAEMPIESLIGSADYLHSGWWQRNGLYVYEPTTPLESIISPMMSGVGRLLVRTETTKKASGMDAGTMHEHRDVEHKLLSETDLLTFMCQQSSVFAATFKQKLSELGLDKPDDSRKLVTVNTGQSALHAYRRMFQENAEAAGVVDCHGKLLAVMTASDLRGVRLHNMEDLLLPVRDFLAKRRFGTVPPPFVVGAETTLLGASAVMIMGGVHHVWVVDAKGVPATIVRMADVLHALWKDA* # ORIGINAL: g6942.t1 original gene structure, not modified by PASA NODE_444_length_23650_cov_42.5198 AUGUSTUS gene 2593 4282 . - . ID=g6942;Name=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS mRNA 2593 4282 . - . ID=g6942.t1;Parent=g6942;Name=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 3925 4282 . - . ID=g6942.t1.exon1;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 3925 4282 . - 0 ID=cds.g6942.t1;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 3415 3518 . - . ID=g6942.t1.exon2;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 3415 3518 . - 2 ID=cds.g6942.t1;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 2975 3179 . - . ID=g6942.t1.exon3;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 2975 3179 . - 0 ID=cds.g6942.t1;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 2593 2801 . - . ID=g6942.t1.exon4;Parent=g6942.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 2593 2801 . - 2 ID=cds.g6942.t1;Parent=g6942.t1 #PROT g6942.t1 g6942 MTITKSASTNCVLPSSTESAAGLRLLGYNRLSPLQSVLPLHANMSTCTSTATEAAVPWPVKHLGQAEAQAIDEELFTAYGFSLDQLMELAGLSVACAAVDAYPLHGDDANKNVLVCCGPGNNGGDGLVAARHLKLFGYNPTIHYPKRPPRQPFSGLVTQCTMMGIPFVDMLPSAGEVTSRFGFAVDAVFGFSFSGDVRPPFADVLSVLRDSGVRICAVDIPSGWDVEKGDQSGGGLTPDTLVSLTAPKLCARHFAGRRHYIGGRFVPERLATERNLNLPPFPGTSCFVALR* # ORIGINAL: g6945.t1 original gene structure, not modified by PASA NODE_444_length_23650_cov_42.5198 AUGUSTUS gene 12189 14781 . + . ID=g6945;Name=g6945.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS mRNA 12189 14781 . + . ID=g6945.t1;Parent=g6945;Name=g6945.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 12189 13383 . + . ID=g6945.t1.exon1;Parent=g6945.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 12189 13383 . + 0 ID=cds.g6945.t1;Parent=g6945.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS exon 13802 14781 . + . ID=g6945.t1.exon2;Parent=g6945.t1 NODE_444_length_23650_cov_42.5198 AUGUSTUS CDS 13802 14781 . + 2 ID=cds.g6945.t1;Parent=g6945.t1 #PROT g6945.t1 g6945 MGMRRYRKLWFVLPVVLVYAYVVYAFYGPSWSSGGSLNSGGGNNNNNNNNNVNNKNVIARDKLPDDDSLYDDGDSAEAFANVGVDSNVGERDPVANNAIRDANNNNEHEDDDEDEESADENKEGPNVFDAVECMGPYDGYPQCEEKLAWLRNNWRTHMCYEELGVDGTDCSFQEYLNVYEDMCPPPNQAGADKSGNGARKGATRRLATFQKSLAGLFLRLEPNHKHAWILTRLRRMEPEWKAAIEVYAASQSGKERERKNILMYMGFVSDAFNERIAENAFSGGPLGELVQWADLMATLYLLGHELTIVTEQHELSRHTGTSTPCGVGGGVGFDIVYIDIIGLRHFRGASSDAFDKHRCKFRVLDSFGTEAQFNVGFNNEWSDWGGWRLNLKQFYTMFPHSPDNSFLGFVVEKPRRIVPWDQKKNRAVIYGKELDMWIGKRSLIDAVHVRFEVHATVGNTKADRVDKSVVPPYVVNHGVLSADDLQDLLAESKVFVGMGFPYEGPAPLEAIANGCIFINARFTPPKSALNTPFFAGKPTRREFSSQHPYMEDFVGTPHVITVDVDNPDSIIVALDNAVSRAPTAKIPREFTMGGIIERVDAFVRHHLFCDDAGVVWPPLRSLVSIVSEPGLSCKETCRLRAYVCEPAFFPLINKREEASSLLNCKSTAETKALTAPHKHSMAAACSLQEDPMLFSCVGKAPNVVRLCPCRDFLPGQSAICTRCL* # PASA_UPDATE: g6943.t1, single gene model update, valid-1, status:[pasa:asmbl_7332,status:12], valid-1 NODE_444_length_23650_cov_42.5198 . gene 4734 5660 . + . ID=g6943;Name=g6943.t1 NODE_444_length_23650_cov_42.5198 . mRNA 4734 5660 . + . ID=g6943.t1;Parent=g6943;Name=g6943.t1 NODE_444_length_23650_cov_42.5198 . exon 4734 4779 . + . ID=g6943.t1.exon1;Parent=g6943.t1 NODE_444_length_23650_cov_42.5198 . CDS 4734 4779 . + 0 ID=cds.g6943.t1;Parent=g6943.t1 NODE_444_length_23650_cov_42.5198 . exon 5070 5660 . + . ID=g6943.t1.exon2;Parent=g6943.t1 NODE_444_length_23650_cov_42.5198 . CDS 5070 5341 . + 2 ID=cds.g6943.t1;Parent=g6943.t1 NODE_444_length_23650_cov_42.5198 . three_prime_UTR 5342 5660 . + . ID=g6943.t1.utr3p1;Parent=g6943.t1 #PROT g6943.t1 g6943 MPDVFEKLDPVFLARRRVVSVCVMEPPTHDRLWRWIDGLEAAAPGISAAPIVVNITNLAKDDEEFAYRTTGEQSPTSPTHAHGRLHAHPLSTGGKTVDADAITVG* # ORIGINAL: g2137.t1 original gene structure, not modified by PASA NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS gene 137 2717 . - . ID=g2137;Name=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS mRNA 137 2717 . - . ID=g2137.t1;Parent=g2137;Name=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS exon 2313 2717 . - . ID=g2137.t1.exon1;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS CDS 2313 2717 . - 2 ID=cds.g2137.t1;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS exon 1939 2104 . - . ID=g2137.t1.exon2;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS CDS 1939 2104 . - 2 ID=cds.g2137.t1;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS exon 1123 1583 . - . ID=g2137.t1.exon3;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS CDS 1123 1583 . - 1 ID=cds.g2137.t1;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS exon 137 567 . - . ID=g2137.t1.exon4;Parent=g2137.t1 NODE_3734_length_2872_cov_34.8302_potentialcontaminant AUGUSTUS CDS 137 567 . - 2 ID=cds.g2137.t1;Parent=g2137.t1 #PROT g2137.t1 g2137 VCPDDILAGPIPTPGLRTCRHVFGDLAINNPTPTSLSVLASVGSVTGSLSIRATTLTSLAGLENLQAVGGSLSISDNTALASIAQLNGLRTLRNGGVIINNTVLCGAQTAANWSTAVSRTSPPLRILSSNPDCAGFGRGYYRARVSRDRPLLRIIDALRFSNPKSIAVTDSLLADPDTAGVSVSLSSPDTLNTTAIALVSQSGFSIDGWIRFTGAGSFPFVRVVDSNGKTLLGAQVVTAGHIVLTTTAGTQTSSVTVPANTIAHIAIVYSDLKLDGIPTMTLYINGVADAPFSTAFVPPGSMCAIVFDTSPSARVYSEMYAYDYPIGRTMILDRIRVGNGMSLESTCAPDVTTGGNTDCGNFARNITVTGFMRRRTSDGRFIDDFSSQIDITASGTRGNAIIVVRTPLKQVSYAAALFCSSLGSGVTALDVLVNGVVAYRGAMTVDASDTTLRILHLNEQPQGQCVATPSGFASGTSSFRLGRPGD* # ORIGINAL: g14016.t1 original gene structure, not modified by PASA NODE_1195_length_13207_cov_49.8897 AUGUSTUS gene 6045 12578 . - . ID=g14016;Name=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS mRNA 6045 12578 . - . ID=g14016.t1;Parent=g14016;Name=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 12539 12578 . - . ID=g14016.t1.exon1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 12539 12578 . - 0 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 12048 12164 . - . ID=g14016.t1.exon2;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 12048 12164 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 11238 11513 . - . ID=g14016.t1.exon3;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 11238 11513 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 10704 10988 . - . ID=g14016.t1.exon4;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 10704 10988 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 10365 10508 . - . ID=g14016.t1.exon5;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 10365 10508 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 9889 10013 . - . ID=g14016.t1.exon6;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 9889 10013 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 8098 9396 . - . ID=g14016.t1.exon7;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 8098 9396 . - 0 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 7743 7814 . - . ID=g14016.t1.exon8;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 7743 7814 . - 0 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 7355 7459 . - . ID=g14016.t1.exon9;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 7355 7459 . - 0 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 6566 7100 . - . ID=g14016.t1.exon10;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 6566 7100 . - 0 ID=cds.g14016.t1;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 6045 6253 . - . ID=g14016.t1.exon11;Parent=g14016.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 6045 6253 . - 2 ID=cds.g14016.t1;Parent=g14016.t1 #PROT g14016.t1 g14016 MASAVKDVADENAGDQLTDSQKRLLTAAKDGDVPTIRFLAQTGGSAFNVNFQGKAKGSKGWTPLHLSAYFGRLEAARALIELGADVNAQDGHNGDTPLHRAAFTGRVDMVLALLQANADTLVKNEEGNTAADVVQNKEIMGMLQKAMLAQRLDAERKLLVAARDGDSGVVSALLTGSNPPAIDCRDANGNTPLHCAANRGHAETVVLLLQNGADATIANNSRRTARDVAKDDRTREMLAVNPVTRSSQAALFSRIEGFLSRSTAFRSKRRYFVLEGGVLSYYDTQTEGSTDARPAGYVYLKNAVISARQGDKTRFIVREGPTTYALQAQTEQDARRWMDALVSQKAQATTLQQSGRTSLNNVLSGAPQPDASRGSIEENLTRADELRMKLASQVSEAKDELEGRGVTAHQARPHSAGAGAGAGGAVAGAASSSSSSSTAAAVVKKLESAMDTANQMNTALSNCLDIVQQMEGYWSKQFEREKESKRVLEECLRVLAAEHHDLERRAHALAVVAGIGGGASGMGGGAVAMDAADNDEFYDAIDGDRFYDAPEDTNEDDISDGGDAGSASAVSVASAVAAVDAAPPSSSSPLGSAVAPAGSFAPPSNRKHSRTHSQSSIAAVAARVQRGSSGGVDIPAIRAVLGPNDRYRTTLPSPTIDRSKVSVWSFLKQFIGKDLSKITMPVLFNEPLSFLQRLCEDLEYSYILDEAAKADDPHTRIAHVAAFASSYFAASEGRVGKPFNPLLGETYELVREEYGFRALAEQVSHHPPISALHADSPNYSFWECNQVRIKFWGKGVEVNPVGTLHLILKGRNEHYTWTKNTTCVHNIIVGKIWLDQYGQFEVRNHTTGDFAWVDFKQRGWFGKGAYEIEGYVFDKSGQPRVGIDGKWNEYAASYPLTPEEVTAAQAKMSVRARRNSKAGQPSAPTEPRKPTAEPLSSRAGYKEMWRRHAMPPNAEEMYMMTYFAASLNELKPGDDARLCPTDARLRPDQRALENGSVDLASAEKVRLEEAQRSRRKQKEKAGLDPHDWTPRWFRKDTDHVTGEPMWTFTGDYWKERQAGQFTGVVPIY* # PASA_UPDATE: g14013.t1, single gene model update, valid-1, status:[pasa:asmbl_730,status:12], valid-1 NODE_1195_length_13207_cov_49.8897 . gene 324 1989 . + . ID=g14013;Name=g14013.t1 NODE_1195_length_13207_cov_49.8897 . mRNA 324 1989 . + . ID=g14013.t1;Parent=g14013;Name=g14013.t1 NODE_1195_length_13207_cov_49.8897 . exon 324 443 . + . ID=g14013.t1.exon1;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . CDS 324 443 . + 0 ID=cds.g14013.t1;Parent=g14013.t1;5_prime_partial=true NODE_1195_length_13207_cov_49.8897 . exon 742 854 . + . ID=g14013.t1.exon2;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . CDS 742 854 . + 0 ID=cds.g14013.t1;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . exon 1056 1167 . + . ID=g14013.t1.exon3;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . CDS 1056 1167 . + 1 ID=cds.g14013.t1;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . exon 1488 1989 . + . ID=g14013.t1.exon4;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . CDS 1488 1748 . + 0 ID=cds.g14013.t1;Parent=g14013.t1 NODE_1195_length_13207_cov_49.8897 . three_prime_UTR 1749 1989 . + . ID=g14013.t1.utr3p1;Parent=g14013.t1 #PROT g14013.t1 g14013 AVVTGREFVTSDTKGPNFSSFNPIIAANKDSVQGFIDYVSAMPDDDLSDRIARMSHETRDTRLTIFVTEGENRAALTRILYHVVHCEGHVIDYITKAEREARGASNKDSPQGFTKMTTFLETVLVSRIIAARMRVRRSNAPPADPSDGKDSTLVKKTKVDFFRFFKRSKSNDKEKKSGTTPDGSASSEQLQSAFALQSQAK* # PASA_UPDATE: g14014.t1, single gene model update, valid-1, status:[pasa:asmbl_731,status:12], valid-1 NODE_1195_length_13207_cov_49.8897 . gene 3044 4064 . + . ID=g14014;Name=g14014.t1 NODE_1195_length_13207_cov_49.8897 . mRNA 3044 4064 . + . ID=g14014.t1;Parent=g14014;Name=g14014.t1 NODE_1195_length_13207_cov_49.8897 . exon 3044 3714 . + . ID=g14014.t1.exon1;Parent=g14014.t1 NODE_1195_length_13207_cov_49.8897 . CDS 3044 3714 . + 0 ID=cds.g14014.t1;Parent=g14014.t1 NODE_1195_length_13207_cov_49.8897 . exon 3935 4064 . + . ID=g14014.t1.exon2;Parent=g14014.t1 NODE_1195_length_13207_cov_49.8897 . CDS 3935 4064 . + 1 ID=cds.g14014.t1;Parent=g14014.t1 #PROT g14014.t1 g14014 MRQQDGRGERERKRRRHSSSSVSSSCDSSESSSDSSSSSSSSTRSRSRERERKRRRKERGSDFEGTGVDKDAKKHGSAESDEKRTKKKKDSKKERRERKREKKKERKQRKREQRDKKEKEKRRSAAAGGAGDRATHTVTSAGSHAPAGPTVAPGRSGSVANSRSSDSRSVRPNASAAMGAMNVSASRGDTEPTKKPMVPMTKEEWDKLHSKMREEIDPETGRIRLVRGTGEILERIVSRDEHKRINQLSTKGDGDSFLRKLGLSGR* # ORIGINAL: g14015.t1 original gene structure, not modified by PASA NODE_1195_length_13207_cov_49.8897 AUGUSTUS gene 4405 4728 . - . ID=g14015;Name=g14015.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS mRNA 4405 4728 . - . ID=g14015.t1;Parent=g14015;Name=g14015.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS exon 4405 4728 . - . ID=g14015.t1.exon1;Parent=g14015.t1 NODE_1195_length_13207_cov_49.8897 AUGUSTUS CDS 4405 4728 . - 0 ID=cds.g14015.t1;Parent=g14015.t1 #PROT g14015.t1 g14015 MLAVPPISDRRLKRDRQLRSIVNKTLSTQSIDVAATAADASERGEDDGDDAMSVTVSASGTTVEELAESDDTRDVGSVVRQDVALGISRHDYRVVGRPPSNTNPPSQ* # ORIGINAL: g6144.t1 original gene structure, not modified by PASA NODE_574_length_20957_cov_39.7959 AUGUSTUS gene 7515 8410 . - . ID=g6144;Name=g6144.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS mRNA 7515 8410 . - . ID=g6144.t1;Parent=g6144;Name=g6144.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 8204 8410 . - . ID=g6144.t1.exon1;Parent=g6144.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 8204 8410 . - 0 ID=cds.g6144.t1;Parent=g6144.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 7515 7982 . - . ID=g6144.t1.exon2;Parent=g6144.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 7515 7982 . - 0 ID=cds.g6144.t1;Parent=g6144.t1 #PROT g6144.t1 g6144 MSGRGAQDASVGRRVFLPAGIPSCLPLPKGWPKEDGLRFVTFNVWATNVPRELRNKLRPTTKCTGPCPKVSIRRIDEPGHPACGQRGLFAAVKLEPRAYVMDYVGYLHPDCDSSKESDYVLKFAEGMSIDAEFVGNEARFINDFRGITGVKRPNVAFENRTDPHTGEVRIGVWVLSEAIRKGAELCVSYGKGFWKHRSTDTDDNTGEGDDVSAMQDEATDSGDM* # ORIGINAL: g6147.t1 original gene structure, not modified by PASA NODE_574_length_20957_cov_39.7959 AUGUSTUS gene 19781 20916 . - . ID=g6147;Name=g6147.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS mRNA 19781 20916 . - . ID=g6147.t1;Parent=g6147;Name=g6147.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 20871 20916 . - . ID=g6147.t1.exon1;Parent=g6147.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 20871 20916 . - 0 ID=cds.g6147.t1;Parent=g6147.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 19781 20688 . - . ID=g6147.t1.exon2;Parent=g6147.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 19781 20688 . - 2 ID=cds.g6147.t1;Parent=g6147.t1 #PROT g6147.t1 g6147 MDGDVCAKLASSDYKCLDIAFGGCEGEFGGILIRTLQRIATDGTPTVVTCGPSLVVDALLSAAGVSCIREFVLAADRRLSVDSVDVSTQSEVPSHLRDDATTVRAHTSSALRGAEPSLSMRLRWARDAGVKIPTLAPLATPRIGLNVRTKATGHLYVARRYRFLVRPDVVSKGRPHLVASLRSRGLTAADIDAVLAGREMACSAVMSNHGSEVQKDSRGDSLDSEHEGPIGTTRRRARVVKKDTPVISECDGAGDVPANTGAVVGPVSISKSVAALVAAYDRAKHTRMRWETWASHKSLGAADVCMLTAAIDARDGP* # PASA_UPDATE: g6143.t1, single gene model update, valid-1, status:[pasa:asmbl_8260,status:12],[pasa:asmbl_8267,status:12], valid-1 NODE_574_length_20957_cov_39.7959 . gene 315 6664 . + . ID=g6143;Name=g6143.t1 NODE_574_length_20957_cov_39.7959 . mRNA 315 6664 . + . ID=g6143.t1;Parent=g6143;Name=g6143.t1 NODE_574_length_20957_cov_39.7959 . five_prime_UTR 315 315 . + . ID=g6143.t1.utr5p1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 315 383 . + . ID=g6143.t1.exon1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 316 383 . + 0 ID=cds.g6143.t1;Parent=g6143.t1;5_prime_partial=true NODE_574_length_20957_cov_39.7959 . exon 877 948 . + . ID=g6143.t1.exon2;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 877 948 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 1102 1173 . + . ID=g6143.t1.exon3;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 1102 1173 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 1353 1418 . + . ID=g6143.t1.exon4;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 1353 1418 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 1834 1905 . + . ID=g6143.t1.exon5;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 1834 1905 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 2214 2285 . + . ID=g6143.t1.exon6;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 2214 2285 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 2589 2669 . + . ID=g6143.t1.exon7;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 2589 2669 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 2998 4655 . + . ID=g6143.t1.exon8;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 2998 4655 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 4932 5004 . + . ID=g6143.t1.exon9;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 4932 5004 . + 2 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 5323 5376 . + . ID=g6143.t1.exon10;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 5323 5376 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 5598 5692 . + . ID=g6143.t1.exon11;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 5598 5692 . + 1 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . exon 5907 6664 . + . ID=g6143.t1.exon12;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . CDS 5907 6469 . + 2 ID=cds.g6143.t1;Parent=g6143.t1 NODE_574_length_20957_cov_39.7959 . three_prime_UTR 6470 6664 . + . ID=g6143.t1.utr3p1;Parent=g6143.t1 #PROT g6143.t1 g6143 SLMGTRAPLPANAFADMKSLSTLTLSQMGLMSVPDRMILGASNLTELDLSVNNLVSIPGVFLRDAWNLRKLILNDNYITLVPYLYNCNELRDLILKNNNISRLDTSALYGAYMLQNLDLSGNALTTIPGGIFGNAKRILNLDLSNNLISSLPTDAFEPIIAGRQFVSNDCLLPAEFDNAVRICLDNNPGGIGNMCSVPDNHCISPTCTNCYCSPGWNGTSCTDPCPRGTFGSNCSEICNCPASPPSRTCDRVSGACASVFPDIDMDRTVVWPEEIHLVFDLVCGYSPVDACEYRLSRSVDDGLPIIFVPTRRDLLSEERNDIVTEADESIRRRTRRGIVNETLLAILTPSSPTFIDAPLRPNTSYVYSIETNDTHVPKVYFDSIRTPLLGLPSAPKNVRKMEGLSQTNIGLNWDAPPANKGKILGYVVYRAGAVVESFADDTHPRSHVETLTSVGDYTFQVSATTGAGEGNKSAPFTISVTSIDPGVGQTASSGQNNSGAIAGAVIGCVGFLIAAVLVAIYFRRRRSEMSVRKEQNEMIMLVENAVHNPKIGELEVDPSALRMLERIGEGEFGSVHKAILSKQVDGSTAASVTVAVKTLKLDATLSAADTQAISAAFYGEIQLMNSVPAHANVVALVGVVTKVEPRRIILAFAEHGDMRSYVHKYGERLLPSQLLSLAVDVARGMAHLASLSITHRDLAARNCMIFADAGTSTGVTAKVGDFGLSRHMDGSDYYRIRSRTKLPIKWMSIESITHRTFTTASDCWSFGIVLWEIMSLGEKPYSSMNNQDVGDYLKSGHRLACPDNCPNAAYDIMMMCWRKMPETRPSFAVLSERLSSIVATLPNASNVGTVRQAANSTSTGSGTNSPGATSSSIVRYETTRGRHFATRQSIPFATNAAMGLVAPSESSVRPASYLDVSEPSSPAPARAAEATLVNVDDCDNSNNNNNNNNNSQAVGGNVSGSYKELEPIEILDLAPIESLDV* # PASA_UPDATE: g6146.t1, single gene model update, valid-1, status:[pasa:asmbl_8261,status:13],[pasa:asmbl_8262,status:12],[pasa:asmbl_8263,status:12],[pasa:asmbl_8264,status:12],[pasa:asmbl_8265,status:12],[pasa:asmbl_8266,status:12], valid-1 NODE_574_length_20957_cov_39.7959 . gene 14272 18574 . - . ID=g6146;Name=g6146.t1 NODE_574_length_20957_cov_39.7959 . mRNA 14272 18574 . - . ID=g6146.t1;Parent=g6146;Name=g6146.t1 NODE_574_length_20957_cov_39.7959 . exon 14272 18574 . - . ID=g6146.t1.exon1;Parent=g6146.t1 NODE_574_length_20957_cov_39.7959 . CDS 14663 18574 . - 0 ID=cds.g6146.t1;Parent=g6146.t1 NODE_574_length_20957_cov_39.7959 . three_prime_UTR 14272 14662 . - . ID=g6146.t1.utr3p1;Parent=g6146.t1 #PROT g6146.t1 g6146 MSPPEFPACDDRRPTLIPDHIRFVHVNWLTPGPEEGEHGGDAGATAPAHAQTAAAPSTPHVSSSITTTNHVPAGTSPDVTVFTTTNTIEGASGLSESLDNATVDDAQADANVQPRDLSKGVLPEFVSDPRDIFQLLENPPGLSKDRFFIRRVAVLLPCFNEENYEIIRTLLSLRDGFLYVRSMELACQSRFRTVFQVVVVQDGILKAHSTFIPMVAQLLAAFAADGVGLAYDTTSRQQEGLGTSIDMDLETPGDKFNHYFSSADKDDNPAPLYRAYDANNPYEGVQQIAYDEVISTLEYFRQEQKDSEKLPAAEAAVVSKSTMVLESRRWDSPGADGVWTLSFIIKARNQLKHNSHDWFLRPETGFAAHNAFQYMYLTDAGTTFAKTTVHRLIDYLDLHPKTVAVTGRQRVMGPGPAQRFDPDVRTGPPHWPLYKEIRDRLLSVLPPTPLVPNTFSEMLRAVQQYDYETAFACLMGAFNLAGFLPVLPGPCGLFRCSAMYNTPERSYSHLVERSTWAQDAEEFGVESTNPFSLDLGQERDPTLTFGERLFQRPWPLVVYGVMEGVFETVVFGSAFLLLLALFLPFVAVASGAWLFIRLFAATLWLLSKVGGCIAFCHNELICRNGCVYSTGAGDDSDCSQGCCECGWWPYGRRLQRMRARATAHNEHLPYSGFQTRDISGSLPGFLKTMKRPSLADYFPGLDHGCDWICQCGNDEEEARDNEDIVLYDLDMDDFGGRQRRGRTRAARIATPAHDESAAAEGDGNRHGAGELEATSGNHVADVSAGYSPDSPHVDDFSGAQQDPDVSATMVVSKRRSSARSARIVSIEDGPVVEATGTAPTALTTTTTTATTDHNNRDYHEERSVDSQSVRRVSVAAASAPLQSQPMDTSSVAAAADVGVVVVPPCPAKWYLDSIKDSTANPGIVKSNLVLAEDRILTLAIVLKTNAETPSISMVSDAVFYFEPETEIEKFVAQRRRWTNGSFAGYIFLATNLDIIWSSNMTFPRQLFVVMLCILQLIIYSFFAISPGLFLAMFDFVVSAVMPSSVVEIARGDRTFLWGMFVLLYVLYMGVHASGVRLFRWSFVIIYFIGVIVMIGSMKKIFEDVALNPLDTLHLAIYGDKDTTPVTNRLTLELIVAVYMTYPLSTLFYSPTAFVHIVAGFVPFYMFLPTFVIGMGGFSFSRLWEVTWGNRSSEVHLQAETQREMKQTGWTLTAIIVILNLIIMVAVEVAFQLQIVVFGMGVIVLGCGLIFMVFSFIYFSYSAMVMFLAAPFCALAFVLECFVFYVWRLSDLNGTGRYASLPDV* # ORIGINAL: g6145.t1 original gene structure, not modified by PASA NODE_574_length_20957_cov_39.7959 AUGUSTUS gene 8868 13997 . + . ID=g6145;Name=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS mRNA 8868 13997 . + . ID=g6145.t1;Parent=g6145;Name=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 8868 8966 . + . ID=g6145.t1.exon1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 8868 8966 . + 0 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 9210 9648 . + . ID=g6145.t1.exon2;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 9210 9648 . + 0 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 9996 10330 . + . ID=g6145.t1.exon3;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 9996 10330 . + 2 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 10577 10856 . + . ID=g6145.t1.exon4;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 10577 10856 . + 0 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 11176 11320 . + . ID=g6145.t1.exon5;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 11176 11320 . + 2 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 11598 12147 . + . ID=g6145.t1.exon6;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 11598 12147 . + 1 ID=cds.g6145.t1;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS exon 12633 13997 . + . ID=g6145.t1.exon7;Parent=g6145.t1 NODE_574_length_20957_cov_39.7959 AUGUSTUS CDS 12633 13997 . + 0 ID=cds.g6145.t1;Parent=g6145.t1 #PROT g6145.t1 g6145 MGDSDDDCVFYGSAIERPAPAAGSEDGAAPFRKKHVPVQKQIAVDSDGRRRFHGAFTGGFSAGYFNSVGSKEGWTPSTFRSSRTERASAQQQPQDFMDDEDMGEFGIAPKRIVATDTFAQGDSTAAFRTAKRRMEDGGHLAGPLLSLVEPAQEGIGYQLLRSMGWRAGQGIGARIVHRRPRRDDATKEKPGETSARLYGCMLPPSLMEDRVLDVADEGKQALQDERIADIVHAGETDEEDGCASAAPKFAETVGYAPKDTDVVRFAVKNDLHGLGYDARKELGLDEMETDEPLADPRGTHRGFGIGALEDDDDPDVYNNDTIANYDIDVSRDIALAKGRLLHKKGERGGSGHGGHGYAHAHAHTRGHEHEHPRRMCADGRPPLPGFILMTTSTAPTKRYVLPNVPKDFVPIHKFETPTDEKDSTGQRTEQQRSHRQMSATERAAVLDGIPSPALTGGSGADNGGSVFEYMRAEDAQRLRMNQLQQQSRAVEAQRRQEEARRVQEERERHMRQLSSVPPAVAKLALASNFKPFVSDAPKQLRYEHFLSRAADSEEEWKRANAADVVKMERDVARMTEWEIQGEITEFARSAAMFRPMNSVMASRFTSASSGDSAREQTAPAPAAEEPKKEAIKRVSRERFEWHPDNVLCKRFNAPNPHPNSGIVGVPGTATAVSVPTAPANTGARGGLPNLPLLSAPAHQSSGDDVDAIGANASRHEGLELPPKPAMDLFRAIFADSSDEDESGAPNAQKKDSAVLPRDAGVRPTVVYEGGVDPSGVERGTAPPPRAQPTAPLSHGVTAPIAPIVRAEAEYGHRPEPKWEIPRHHEPFTGVRSGGAPHVVDARDTPAQRQGATESLWMPTCVVGTATSTAAAGENIRGEVLQRDKERDLKGQRDSGGGGVVSSSDSSSDSDSADRDRHRHRSSSHKSKPKKSKKDRKDKKSKKDKKDKKHRKSDRDRGDRGDRDRHSHRHSERTTRDASRDRRDRAARDGEEKAAEDRLGAAKRSTATDVRGVISERGRSGTEHVAVLSGDNRHATDVDARLREALRHASKEMVEAAKASVRARPKASDFF* # PASA_UPDATE: g3433.t1, single gene model update, valid-1, status:[pasa:asmbl_5166,status:12],[pasa:asmbl_5167,status:12], valid-1 NODE_2876_length_4871_cov_38.9089 . gene 626 4679 . + . ID=g3433;Name=g3433.t1 NODE_2876_length_4871_cov_38.9089 . mRNA 626 4679 . + . ID=g3433.t1;Parent=g3433;Name=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 626 2239 . + . ID=g3433.t1.exon1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 626 2239 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 2456 2608 . + . ID=g3433.t1.exon2;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 2456 2608 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 2902 3087 . + . ID=g3433.t1.exon3;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 2902 3087 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 3328 3373 . + . ID=g3433.t1.exon4;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 3328 3373 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 3695 3852 . + . ID=g3433.t1.exon5;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 3695 3852 . + 2 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 4053 4157 . + . ID=g3433.t1.exon6;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 4053 4157 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 4400 4523 . + . ID=g3433.t1.exon7;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 4400 4523 . + 0 ID=cds.g3433.t1;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . exon 4594 4679 . + . ID=g3433.t1.exon8;Parent=g3433.t1 NODE_2876_length_4871_cov_38.9089 . CDS 4594 4679 . + 2 ID=cds.g3433.t1;Parent=g3433.t1 #PROT g3433.t1 g3433 MAARHSYPRDPSIQTFPGGAAAAQPPQPHRGSLPFPLASAAAPAPAAYGGPAAFGAPAPAPAAYGGPTAFGAPAPAPAAYGAPAPAPAAYGVPASTPAAYHAPTQPPLPHQSGTQHPNLQHPVGQHSNLQHPVGQHPHMQHPSTQHPQHTQHPGVQMTRPSSAGALLGGPPPPLNGVAPDPRTSYTPPASLTTSVSYGALPSNASSGPPFGAPGGGGVGGAVGSSAGARSSVPGYASQPQPHYGSTGTLSAGMPPATQPYDPTNAPLLQHQQQQQYQQYAPPPTQPAVPAGPPTHLHGRPSAGAAHPLLSQPRGMTPPLGAPAAYAPPAVGVPAHRASYPLTANATAEYGAPFQGAPPPLQSHAMPSAQAQSAYFQPAAPGVQPQHPQQPQQPLYSQPNYPNGAAAAYGQYAPSQQPQQPQQPQQQQHAMQGGPQGMTNLLSQRGQFIDIAPPPPRPTLPGMDPRDPKNASARFMRLTMNAIPQTSALLSKSRLPLGLYVYPFATMAESELPIIQSTTIARCRACRTYINPFVQWTDQGRRWRCNLCFRLNDIPADFDFNTTTRQPIDRSMRAELNHGTVEYIAPSEYMVRPPQPAAYLFLIDVSHSSVETGVLAATARTLLDNLDRMPGDARTQFGIITYDSTLHFYSLKANLSQPQMLVVSDLEDVFLPSPDDLLVNLNDCKEMIRALLGQLPAMFANTRNVHSALGPALQAAQKMLAPIGGRISVFQTTLPSIGVGQLKNREESGIRGTPKEWACMQPATDFYKELAVDASRQQIGIDTFLFLGTYTDVATLMEARRLSMWDLIMPLLGQHNGTGSTARE* # ORIGINAL: g2392.t1 original gene structure, not modified by PASA NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS gene 78 566 . - . ID=g2392;Name=g2392.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS mRNA 78 566 . - . ID=g2392.t1;Parent=g2392;Name=g2392.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS exon 78 566 . - . ID=g2392.t1.exon1;Parent=g2392.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS CDS 78 566 . - 0 ID=cds.g2392.t1;Parent=g2392.t1 #PROT g2392.t1 g2392 MSNIFMLFTNRSTQHKNSAAAYKAMSDGTCKVLYDNALEETSHYTIGDTQTFVDAIAQLRHAEQNEEADEIEKTLQLLFATCMDVYLRVFESPGVVSHALRISLETLDSRTHDINDKRQLKINVLRGYMKALNKMLDLRAAGISANEPDSDDASSDSPADMEG # ORIGINAL: g2393.t1 original gene structure, not modified by PASA NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS gene 1957 2585 . - . ID=g2393;Name=g2393.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS mRNA 1957 2585 . - . ID=g2393.t1;Parent=g2393;Name=g2393.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS exon 2541 2585 . - . ID=g2393.t1.exon1;Parent=g2393.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS CDS 2541 2585 . - 0 ID=cds.g2393.t1;Parent=g2393.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS exon 1957 2340 . - . ID=g2393.t1.exon2;Parent=g2393.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS CDS 1957 2340 . - 0 ID=cds.g2393.t1;Parent=g2393.t1 #PROT g2393.t1 g2393 MTLDKPDERNEQFEQAKIESIKDKETVIALLKAEVKRKDEEVKKMKEKLHRKDEEVRKMKEKLDRKDEEVREMKEKLDRKDEEVRKMKEKLDRKDEEDKKMKEKLERREIYISDMFEKWFSIPFKTPPRFVVELRQSMQQRR* # ORIGINAL: g2394.t1 original gene structure, not modified by PASA NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS gene 3882 4151 . + . ID=g2394;Name=g2394.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS mRNA 3882 4151 . + . ID=g2394.t1;Parent=g2394;Name=g2394.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS exon 3882 4151 . + . ID=g2394.t1.exon1;Parent=g2394.t1 NODE_2339_length_6653_cov_70.1355_potentialcontaminant AUGUSTUS CDS 3882 4151 . + 0 ID=cds.g2394.t1;Parent=g2394.t1 #PROT g2394.t1 g2394 MTCARASSKLENDQSVVDKLVVDTVDMSVVDTVDMSVVDTVDESVVDIVDKSVVDTVDKSVVDIVDKSVVDTVDKSVVDKWLLSKFQKS* # ORIGINAL: g14204.t1 original gene structure, not modified by PASA NODE_258_length_28958_cov_89.8022 AUGUSTUS gene 14756 18607 . - . ID=g14204;Name=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS mRNA 14756 18607 . - . ID=g14204.t1;Parent=g14204;Name=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 18281 18607 . - . ID=g14204.t1.exon1;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 18281 18607 . - 0 ID=cds.g14204.t1;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 17293 18083 . - . ID=g14204.t1.exon2;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 17293 18083 . - 0 ID=cds.g14204.t1;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 16992 17159 . - . ID=g14204.t1.exon3;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 16992 17159 . - 1 ID=cds.g14204.t1;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 14756 16760 . - . ID=g14204.t1.exon4;Parent=g14204.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 14756 16760 . - 1 ID=cds.g14204.t1;Parent=g14204.t1 #PROT g14204.t1 g14204 MQLSLVRGAVMLGIYYAFVARVVRRIVNADTKDASHHDDESLFFDERAASFVIPLALIVYAAFKAWDMRVDSDDNMYGHTGTAIAMLATTAIASLAEFATSFFLFVVLYVRWQDKTILDEESPLMGRVRRRRGSSSDNGSYSSTGSSSPPGGVDKGKRRATTSEDGGSVGASLGHGRRRHDDSESSTDSDEDEMAAIESSFAAGSSGRVIPGGGGGGGGDGGDGDHMPPPSFARSHPRLSIVSSGGDSPLSFVSSPGIGVGVGHVAPQTVALVGSSSSPTIPPGTSLASTHGGAVGSSAGSMSFGTPGLGAGGGAVGVGSQSPVLVGLVGSMDGVGLVKSAGSSSPHLGREQQAGRPDRRTNLAMELLKTEETYADGLNVIIEVFLTPLKEAAAYERPVASLKEIRAIFSEIEPIHTISSHLVGELRNRLARWGPCTCLSDVFSRGIMNYLKLYSVYVNNYEEALNVLDKCRRSNAAFRAFVDRGEANPACGRMCLADLLILPVQRIPRYVLLLNDLVRYTAASHPDHAGLREALDGMRQLAVRINEAKRQADRVHRMIAVQMTVRDCPELMGNGRRLIEIGRFVELEGAGGYIGARRVTSRVLQRMVEAIAGEIGFDPSKPPSPPPIASAAIPMGARALAAADRAALAHIERLKSDAAGSENTALTLSSGSTITMDPINYENASLNVSMTASMGIGASALNLSGPGARLGVASLSSSGAAQSPAAYGGGGELSGGVVSHPVRPSPVSPTPLSSAAGLSPASHPDSKASPTADALLEGVLEGFEGSEVDLFGSPSYGAAAASARRVAALAEAPSVSGALADALGDPVVNGGGEHEAALATGESVDGQVDAVAVDDAFHGALAAYASQFLAVDAAALVLRRDPPNLEDFATVFGVSLRAQLSRPSAVGDSAALNVANKAFIEGMERFWTIVATCIDQRPPGAALVKRQKTTAYVFNDCVMLCRRRKPRNWRRPSLSMASGPGASLFSTSGSALMSPSSDPRYDMLQGEEITFQRLIPLDDVTASQPLPGTEIGTEDASRLVTLSYAGRTHLMRADEKAMRDRFVQAVTASAAERAAALSSERSSPLTIIHVVHETTV* # PASA_UPDATE: g14201.t1, single gene model update, valid-1, status:[pasa:asmbl_4600,status:3], valid-1 NODE_258_length_28958_cov_89.8022 . gene 1205 3940 . - . ID=g14201;Name=g14201.t1 NODE_258_length_28958_cov_89.8022 . mRNA 1205 3940 . - . ID=g14201.t1;Parent=g14201;Name=g14201.t1 NODE_258_length_28958_cov_89.8022 . five_prime_UTR 3735 3940 . - . ID=g14201.t1.utr5p1;Parent=g14201.t1 NODE_258_length_28958_cov_89.8022 . exon 3296 3940 . - . ID=g14201.t1.exon1;Parent=g14201.t1 NODE_258_length_28958_cov_89.8022 . CDS 3296 3734 . - 0 ID=cds.g14201.t1;Parent=g14201.t1 NODE_258_length_28958_cov_89.8022 . exon 1205 3172 . - . ID=g14201.t1.exon2;Parent=g14201.t1 NODE_258_length_28958_cov_89.8022 . CDS 1689 3172 . - 2 ID=cds.g14201.t1;Parent=g14201.t1 NODE_258_length_28958_cov_89.8022 . three_prime_UTR 1205 1688 . - . ID=g14201.t1.utr3p1;Parent=g14201.t1 #PROT g14201.t1 g14201 MWPVSTETFVPVFSSTQSCEHIQTGESVLQDMEPIDWFDNVPFVDSLRGFSTEMYGQFGKPVTGDYSMHGQQQQQQQQQQHQPQPQYAYQHAQQAPLVAQQVQQVQQMQSQHQQPLPQQGYIPQHYMPVMPHEVPHQSHHGMSQYQGYVQPQQQVVHQPIPPQIRSALNVPTVARLQSKQKQVPACINCQKSHLSCDRGFPCRRCIVTNKADSCYQAEHKKRGWKRGRKRTLSDDGLSPKTSASTPSSGNSVDAVEALKAFSKAREPAQQQVHHYHHLQQQQQRQQQQQLPHRQQGQNAAAYVVNVPHPQNATESHTHHSVVASPHGSFAPVDVLQFLYESTMAQVITTGGEFAYVSSSFAHAIGYEEADLIGKPVSDFLHPTDVATVLDEMASADLQNEERRFLYRAMPKSRTTDYISFEVCGRHMYDAQTGTARCFVATARQLSTASDRPLATPAAGAGGAMDLAYMAKYSLEGICTNVTPGVANVLGYQPAELIGKWGYNLVHPEDLTRINSVHDQICASLEPISFRYRLLHKAGNFVLVESLARAIPGAQSHVPESLLCTVRFISRIGDGADSNSHHDTAGDDSNSLGADTLSAHGQARTQPPVSIVSMEQLEALLLANTRPTLPAQPQLSHQSSR* # PASA_UPDATE: g14203.t1, single gene model update, valid-1, status:[pasa:asmbl_4603,status:12],[pasa:asmbl_4607,status:12], valid-1 NODE_258_length_28958_cov_89.8022 . gene 8659 14265 . + . ID=g14203;Name=g14203.t1 NODE_258_length_28958_cov_89.8022 . mRNA 8659 14265 . + . ID=g14203.t1;Parent=g14203;Name=g14203.t1 NODE_258_length_28958_cov_89.8022 . five_prime_UTR 8659 8765 . + . ID=g14203.t1.utr5p1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 8659 8874 . + . ID=g14203.t1.exon1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 8766 8874 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 9062 9123 . + . ID=g14203.t1.exon2;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 9062 9123 . + 2 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 9389 9471 . + . ID=g14203.t1.exon3;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 9389 9471 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 9797 9947 . + . ID=g14203.t1.exon4;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 9797 9947 . + 1 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 10061 10150 . + . ID=g14203.t1.exon5;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 10061 10150 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 10491 10568 . + . ID=g14203.t1.exon6;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 10491 10568 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 10705 10926 . + . ID=g14203.t1.exon7;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 10705 10926 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 11226 11358 . + . ID=g14203.t1.exon8;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 11226 11358 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 11741 11879 . + . ID=g14203.t1.exon9;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 11741 11879 . + 2 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 12061 12245 . + . ID=g14203.t1.exon10;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 12061 12245 . + 1 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 12472 12902 . + . ID=g14203.t1.exon11;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 12472 12902 . + 2 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 13136 13251 . + . ID=g14203.t1.exon12;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 13136 13251 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 13430 13556 . + . ID=g14203.t1.exon13;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 13430 13556 . + 1 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 13836 13950 . + . ID=g14203.t1.exon14;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 13836 13950 . + 0 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . exon 14159 14265 . + . ID=g14203.t1.exon15;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . CDS 14159 14178 . + 2 ID=cds.g14203.t1;Parent=g14203.t1 NODE_258_length_28958_cov_89.8022 . three_prime_UTR 14179 14265 . + . ID=g14203.t1.utr3p1;Parent=g14203.t1 #PROT g14203.t1 g14203 MSSPRRRQAAGSLFGILQHRESAPGMPRRRIMHDVLGLKDLSQHLMQTSLLKGHSGCVNTVAWNESGELLLTGSDDHRLNVYNVRNEKLIHSVETGHVANIFAAKFVPATNDTQMLSCAADGTIVHSDVNTDSHKKFRCHTDMAYELYVVPSEPGVFLSCSADHTVKQFDLRVKSSCMCHGCTEDTLVDLEAVTRSPSPTSMNLNPVDHNYFAVGCSDSRVRVYDRRFVRYAGAPACEFVPDHLAGRRSRITSVRYDPDTGSQLLVSYSGECIYLFDLSRQGQRVTAWPGAEAPEQPGRRRLRVRTALNDDETTINNPLVAQLEAFINRHVYADDDSDDGDDSNGGDDDSDTASSSGEAMDIDPLDDAVASSHDNSSDGSDGAVVSEEMAPERHPFAARGRNPPPLRQYPEGPSVTAEAAPSQRATDTPASHVRARRLRSPPDVEPGDRLAAAVRSRRAGNDDVATDDTTESAPLQLVTSLAGSALDSGLVSVVVSPPDDRNARVDDGDAQRRDDAARRIQRGFRNMKRGRREEADCEAKQSEFAPALTMRYLGHRNVQTMIKQVGFFGTRFVMSGSDDGRLFFWEKATGKLLHYVEADRRIVNCCVQHPFDPIVAASGIDSTIKIFGPSPDVQTPAVHLDDVVNRNESRLREDGDHVSIPASLVYRMLLSMRSAAPRAQESDAEG* # ORIGINAL: g14202.t1 original gene structure, not modified by PASA NODE_258_length_28958_cov_89.8022 AUGUSTUS gene 6205 8239 . + . ID=g14202;Name=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS mRNA 6205 8239 . + . ID=g14202.t1;Parent=g14202;Name=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 6205 6237 . + . ID=g14202.t1.exon1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 6205 6237 . + 0 ID=cds.g14202.t1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 6318 6394 . + . ID=g14202.t1.exon2;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 6318 6394 . + 0 ID=cds.g14202.t1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 6567 6754 . + . ID=g14202.t1.exon3;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 6567 6754 . + 1 ID=cds.g14202.t1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 7101 7141 . + . ID=g14202.t1.exon4;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 7101 7141 . + 2 ID=cds.g14202.t1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 7569 7683 . + . ID=g14202.t1.exon5;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 7569 7683 . + 0 ID=cds.g14202.t1;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 7989 8239 . + . ID=g14202.t1.exon6;Parent=g14202.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 7989 8239 . + 2 ID=cds.g14202.t1;Parent=g14202.t1 #PROT g14202.t1 g14202 MAEAPKMEAVGPQSVQPEFHHDKLSPADLDAWLKKRREPANLSDRIALKLAESLSVPALIFFRRKYVHRAVVLETIAAVPGMVGGSLRHLRSLRLMRHDEAENERMHLLTWMKVAKPGTLERILVLVSQLVFFQSYFFLYLFAPSIAHRMVGFLAEESVVLYTDFLTAMESGRLTNKHAPQIAIDYWSLPQTATLRDVILAIRTDEAHHRDVNHHLADRIIARNEDLRNHEDVQ* # ORIGINAL: g14205.t1 original gene structure, not modified by PASA NODE_258_length_28958_cov_89.8022 AUGUSTUS gene 20310 21290 . + . ID=g14205;Name=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS mRNA 20310 21290 . + . ID=g14205.t1;Parent=g14205;Name=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 20310 20487 . + . ID=g14205.t1.exon1;Parent=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 20310 20487 . + 0 ID=cds.g14205.t1;Parent=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 20823 20929 . + . ID=g14205.t1.exon2;Parent=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 20823 20929 . + 2 ID=cds.g14205.t1;Parent=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 21150 21290 . + . ID=g14205.t1.exon3;Parent=g14205.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 21150 21290 . + 0 ID=cds.g14205.t1;Parent=g14205.t1 #PROT g14205.t1 g14205 MAPPRRSARLAKGEAGSVAAAPAPSNETHEKARPKVPSTELRKKQRVSKELLRVETSSKVMDRVSMFLPMLKAANEQLGSQMKDRPAADFDIEGPNLALGVLEGQDEVNEDTLVIPGKVGGSQMEPQTADLKEAPKLIQEL* # ORIGINAL: g14207.t1 original gene structure, not modified by PASA NODE_258_length_28958_cov_89.8022 AUGUSTUS gene 26400 27701 . + . ID=g14207;Name=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS mRNA 26400 27701 . + . ID=g14207.t1;Parent=g14207;Name=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 26400 26459 . + . ID=g14207.t1.exon1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 26400 26459 . + 0 ID=cds.g14207.t1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 26570 26670 . + . ID=g14207.t1.exon2;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 26570 26670 . + 0 ID=cds.g14207.t1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 26817 26946 . + . ID=g14207.t1.exon3;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 26817 26946 . + 1 ID=cds.g14207.t1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 27089 27222 . + . ID=g14207.t1.exon4;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 27089 27222 . + 0 ID=cds.g14207.t1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 27307 27427 . + . ID=g14207.t1.exon5;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 27307 27427 . + 1 ID=cds.g14207.t1;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 27540 27701 . + . ID=g14207.t1.exon6;Parent=g14207.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 27540 27701 . + 0 ID=cds.g14207.t1;Parent=g14207.t1 #PROT g14207.t1 g14207 MPSTGDGSEILAAAVVDGVQLSCAGQDLEEVPAVLGNKYGKTVERLDLSYNSIRSGMQNLSKFTALKDLILDNNCIGDTVEFPSLPSLQTLSLNKNELRDLEFLLDSISKKFPKLTYLSLHGNAACPNELVEKDEDDYKRYRFYVLYRIPTLKFLDSRAVSAEERKEANRVGQFMRVLRPKEASLSSMGEDAASYTPLPENDTSFGTHSTSFGVSKYIYYGKNSEGNRFIRNHDL* # ORIGINAL: g14206.t1 original gene structure, not modified by PASA NODE_258_length_28958_cov_89.8022 AUGUSTUS gene 22247 25631 . + . ID=g14206;Name=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS mRNA 22247 25631 . + . ID=g14206.t1;Parent=g14206;Name=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 22247 22309 . + . ID=g14206.t1.exon1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 22247 22309 . + 0 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 22463 22597 . + . ID=g14206.t1.exon2;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 22463 22597 . + 0 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 23070 23277 . + . ID=g14206.t1.exon3;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 23070 23277 . + 0 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 23567 23594 . + . ID=g14206.t1.exon4;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 23567 23594 . + 2 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 24225 24301 . + . ID=g14206.t1.exon5;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 24225 24301 . + 1 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 24449 24495 . + . ID=g14206.t1.exon6;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 24449 24495 . + 2 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 24821 24891 . + . ID=g14206.t1.exon7;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 24821 24891 . + 0 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 25083 25262 . + . ID=g14206.t1.exon8;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 25083 25262 . + 1 ID=cds.g14206.t1;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS exon 25526 25631 . + . ID=g14206.t1.exon9;Parent=g14206.t1 NODE_258_length_28958_cov_89.8022 AUGUSTUS CDS 25526 25631 . + 1 ID=cds.g14206.t1;Parent=g14206.t1 #PROT g14206.t1 g14206 MSEYNPFGGDSAGNRAPAPRKASAATIGTDDAATTTARRPEAPSARPAAGGGSQASGFVGSEADYLREQLRNKEAELDARNLEIQRLTKDVADTVDRARFKNWPVCYPVVFHDIPKDHTDAVMRRHVYFAYAVWIVMTCGFIFGSLIWTITGIPLSFYFWYYRLYELHRKTGLKQPGISYWFWFFHGFINICWDLVYVIGPAPESGLGFAGFETGIKFFKFGDDNPEHKSKARLFGTLTVINASLWCIITIGSAFTLLTVYRWYRSTGGRNMTQRDVQRGIVAGASHISSSEESQPILGASRNQ* # ORIGINAL: g4509.t1 original gene structure, not modified by PASA NODE_1147_length_13540_cov_42.9201 AUGUSTUS gene 4794 6668 . - . ID=g4509;Name=g4509.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS mRNA 4794 6668 . - . ID=g4509.t1;Parent=g4509;Name=g4509.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS exon 4794 6668 . - . ID=g4509.t1.exon1;Parent=g4509.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS CDS 4794 6668 . - 0 ID=cds.g4509.t1;Parent=g4509.t1 #PROT g4509.t1 g4509 MMAGRLDMATALEQRIAGQIAEKATKRSVADALGRKVERSEFDDALAAIRVDLRAKANGVESTRLYQDFDRRTHTALMSAEHKASAISEQLTAALANKVGRDDHAASLADLERDIVGRMTVRMQRAVAEATSTIMAETTEKVLQIANVPGQIGPIERRLHEAEQAITEVADSLSRHATDLDVLQQTVASSPTMTDVRQHAVEQCAAVNARSEQACLAIESRILKAVDEAVRGLHSALACARDDLSIARSELSTRCDTLVARSGQLERDFQSALEVAIAGVDADRRTLAGDLRAAIGACSSRVAMASEESSAALVELRRTVNEYSGCVAQARSISDELVRGQASTRAVIESHTETLLRMRGSLQEMHTLFGEVRSRIDQSDIDVERVSAAVDDCRVAAATLAEAIDASKGTIASIQISLDDARGRWESMLTELRAELRNSLAEFHGALGAQAGINESVNRAMTSLRDRAETLCLPTGMWMWSSKAALPSGKSDAKLCVQWRNTHPTCFRWSQRQPFIVAECEGVYEILVVAFGAATDRKVRQARLTVKVNGAIISSTMLRSDGLLASPAVTATTGATSLDGRSVCGTTTEYVHLPDRARVSLMIDGSSEIDGILRLSKLTTDPLR* # ORIGINAL: g4507.t1 original gene structure, not modified by PASA NODE_1147_length_13540_cov_42.9201 AUGUSTUS gene 918 2507 . - . ID=g4507;Name=g4507.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS mRNA 918 2507 . - . ID=g4507.t1;Parent=g4507;Name=g4507.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS exon 918 2507 . - . ID=g4507.t1.exon1;Parent=g4507.t1 NODE_1147_length_13540_cov_42.9201 AUGUSTUS CDS 918 2507 . - 0 ID=cds.g4507.t1;Parent=g4507.t1 #PROT g4507.t1 g4507 MEGLSSHVGTVSKFRVVIAISTVSVLLGFFVGRNWGVGSVIDSGITVTSSDGPVVNYGAEGQLSAADLAKGGILTEGGDQLPPIDAHGVANGGHSGEPSADSPSVDPAETNAAGEGGTNISTGDTLDDSPGATVLPPSTDGLSDEDPGDNANNLSTPSHPPPPAEQPVPFHAPKKLATEPRDDPPYSFQPDCGDAPYGIKTVLMYSNPWGGVPCMSFAKCPVSNCVMVWSRDYTETADALIFFRHFEPAPIPPRNPNQVWVMFELEVPLASRYPNMGVEADRPFSHLRYNWTMTFNLESDVPTHYESFGDRLYMPRLLGPFPRKIARVLFMAMNCGSESGREAYVQQLMQHMEVHSYGSCLHNKDFLNVDGAAVYPPGRYEYLTAASYNFIGMYEFYLAFENEIGVPDYSTEKLWKTFRAGTVPIVLGRLPNPAYAPMPEAVIQTADYADAEHLAVYLNNCHSGTSCYSRHMAWRELPEEKLNPAYLALESTGTCELCRKLNAPTTRKSYDNAYKWFRDVSYGPNRRKL* # PASA_UPDATE: g4510.t1, single gene model update, valid-1, status:[pasa:asmbl_553,status:12], valid-1 NODE_1147_length_13540_cov_42.9201 . gene 9314 11970 . - . ID=g4510;Name=g4510.t1 NODE_1147_length_13540_cov_42.9201 . mRNA 9314 11970 . - . ID=g4510.t1;Parent=g4510;Name=g4510.t1 NODE_1147_length_13540_cov_42.9201 . exon 11723 11970 . - . ID=g4510.t1.exon1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . CDS 11723 11970 . - 0 ID=cds.g4510.t1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . exon 11342 11645 . - . ID=g4510.t1.exon2;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . CDS 11342 11645 . - 1 ID=cds.g4510.t1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . exon 11043 11248 . - . ID=g4510.t1.exon3;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . CDS 11043 11248 . - 0 ID=cds.g4510.t1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . exon 9830 10729 . - . ID=g4510.t1.exon4;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . CDS 9830 10729 . - 1 ID=cds.g4510.t1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . exon 9314 9723 . - . ID=g4510.t1.exon5;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . CDS 9423 9723 . - 1 ID=cds.g4510.t1;Parent=g4510.t1 NODE_1147_length_13540_cov_42.9201 . three_prime_UTR 9314 9422 . - . ID=g4510.t1.utr3p1;Parent=g4510.t1 #PROT g4510.t1 g4510 MAAESTVLVLKNEAQGCHCLIVEDNVVLQRVLSKWLEKLGVRFTQMYDGAQAVAACEQMVFDIILMDLSMPTLNGIEAAKVIRSRGQNTTTPIVAFSALTGNPDFFDVGINDFLRKPFTKGDLVNKINKWARVRLQPQRVKHDMSFEDHFGGSLNEQQIDLFDDLPNIFDSFAHALGGNEAIASKSTRVLVVEDDVVTQRVITTHLRKMGIDVVQAFDGKQAVDACTALNFDVIFMDISMPNMNGLEATRFIRDGMARFTPIIAFSSFGSHEEFSALGLNDYLPKPFTKTDIADMMDKWTPFAARTHEDIAPPASTDSFPRTSQLTPMPPMPVNLQAIHSPQSLGQQALNVQQQQHQQHQQQQQQQQQHQQQQMAFKMGATAVGPFSPSGPYASPPGMIVPQAPMHVQQPLPPHHHMAQQAMVGILGGHGESMGAGAGVGVGGMQHMQQAAAGITHPMGRVSASGMDFPAPLNASQMALAHPSSHHGAQSQQHMHPQGQQLQLQQQQQHAALSFSGSGMATAAPLLVGAIGNHDADDLHDPYDSGARKKLKTRLGEIDEDFEKRGKEEFSRASHNDKERLRRKEISDCVDEFRRMVPGCNDKTDKATTLRMAVSYMKELARALSNVGATMQSSGNNSAQHSPSPAVSREDPQ* # PASA_UPDATE: g4508.t1, single gene model update, valid-1, status:[pasa:asmbl_556,status:3], valid-1 NODE_1147_length_13540_cov_42.9201 . gene 3410 4751 . + . ID=g4508;Name=g4508.t1 NODE_1147_length_13540_cov_42.9201 . mRNA 3410 4751 . + . ID=g4508.t1;Parent=g4508;Name=g4508.t1 NODE_1147_length_13540_cov_42.9201 . five_prime_UTR 3410 3481 . + . ID=g4508.t1.utr5p1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 3410 3497 . + . ID=g4508.t1.exon1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 3482 3497 . + 0 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 3582 3665 . + . ID=g4508.t1.exon2;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 3582 3665 . + 2 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 3739 3842 . + . ID=g4508.t1.exon3;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 3739 3842 . + 2 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 3938 4070 . + . ID=g4508.t1.exon4;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 3938 4070 . + 0 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 4418 4512 . + . ID=g4508.t1.exon5;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 4418 4512 . + 2 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . exon 4663 4751 . + . ID=g4508.t1.exon6;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . CDS 4663 4668 . + 0 ID=cds.g4508.t1;Parent=g4508.t1 NODE_1147_length_13540_cov_42.9201 . three_prime_UTR 4669 4751 . + . ID=g4508.t1.utr3p1;Parent=g4508.t1 #PROT g4508.t1 g4508 MPKNKGKGGKNRRRGKNEHDQEKRELVFKEDGQEYAQVTKMLGNGRLEAHCFDGERRLCHIRGKLRKKVWINQGDIILIGLRDYQDGKADVILKYSADEARNLKQYGELPENAKINETDTFGEGDGEDDVTFDFTNDVDDEVEEI* # ORIGINAL: g8371.t1 original gene structure, not modified by PASA NODE_3476_length_3374_cov_39.1064 AUGUSTUS gene 2 3148 . + . ID=g8371;Name=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS mRNA 2 3148 . + . ID=g8371.t1;Parent=g8371;Name=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS exon 2 727 . + . ID=g8371.t1.exon1;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS CDS 2 727 . + 1 ID=cds.g8371.t1;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS exon 946 2397 . + . ID=g8371.t1.exon2;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS CDS 946 2397 . + 1 ID=cds.g8371.t1;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS exon 2565 2683 . + . ID=g8371.t1.exon3;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS CDS 2565 2683 . + 1 ID=cds.g8371.t1;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS exon 2905 3148 . + . ID=g8371.t1.exon4;Parent=g8371.t1 NODE_3476_length_3374_cov_39.1064 AUGUSTUS CDS 2905 3148 . + 2 ID=cds.g8371.t1;Parent=g8371.t1 #PROT g8371.t1 g8371 PVAPSPVAAAGSLAPEAPLPLTVSGSAVLGAGSASMSARSSHSPTGLLSSGGNGVQHAPPAPATAASTATPAPAPAPAPTPAATEPSVTVTDVAWSPGADEVPTGGEAVGGSPAVSASRRMAGAHLIPDALNLSSSSLRGYSIVGDAQPSTRDASGASDEVVCGQGSSRGSGNGDGSDGDDSSTSVGPLPEGWEMRLDQNGRLYYVDHNSRTVTWTRPTRANSGFIRQRSQVERTSSFREFALRENSVDALAYAESVRQHVELPAGDSSVSTFFGGGDDDYLTGAARPNALEPLSSAHEASRSTETEGSDGIYARPEVCSPIGPASPAADASASTSASPAYQQSAPVYRQNTTDDSGAAPEACAQAAAASSHAPAAESATVLRRASTPTTCVGASVSTEPRATLSPSPSGTSTSSAGRAQSPSPSQSQSQSQSQAESQSQSQSQSQSQAQVESQSQSQRRASRCIGDARGDNPLPAGWEMRLSETGRPFFVDHSSRRTTWTDPRARRAPSANASRPGSGAGSSGAAGPASQTTAISQSTSVSRSADTDRTANMLMPARGPGIGTVSSSATAGTSSAGTVPLPPGWEERRTRDGRLFYVDHNSRVTQWDDPRASLSLAARPLGPSGAVQPARVPAYSRNYRQKLAYFRSKLRLSEGKTDLHVSRANIFEDSFREVMRSKASDLKRRLWIAFKDEDGLDYGGLQREWFYLLSHEMFNPYYGLFEYSASDIYTLQINPNSAVNPDHLKYFWFIGRVVGLALFHGKLIDAYFVPPFYKMMLGKEIVLDDMQSVDASYFRSLRWILDNDTTDVLDMTFSVDQDVFGKVETVDLKENGRNIPVTEENKAEYV # ORIGINAL: g3769.t1 original gene structure, not modified by PASA NODE_1150_length_13528_cov_44.0474 AUGUSTUS gene 4233 8481 . - . ID=g3769;Name=g3769.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS mRNA 4233 8481 . - . ID=g3769.t1;Parent=g3769;Name=g3769.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 6952 8481 . - . ID=g3769.t1.exon1;Parent=g3769.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 6952 8481 . - 0 ID=cds.g3769.t1;Parent=g3769.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 4233 6758 . - . ID=g3769.t1.exon2;Parent=g3769.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 4233 6758 . - 0 ID=cds.g3769.t1;Parent=g3769.t1 #PROT g3769.t1 g3769 MSEAVLSHSARMSRRATVAVGGPNPTEGAQHNRQRHMSVATSSPHFSSASHSSASLSVREHTAGLFPVRRHFGVGIGELLSGAGERGFSLPRILIFMCEYLLGYAEALVADGRLNVEGDLRQLFQVIPDPGILAVVRARFDDGDFYDCQSPECVFRLLKAFVREMPHPLVPFESFGAAMSLIDGQMQWAVQKVRSHPHYRALLASLSDTVAMEIDSWVAAMADGESTGGSSYAISDDGVVDCARPLQGVVRRLALGSHAPLSAVEDFFFSLPKTHRDALEYLGVFAAKMDLTARRTSRSMDLPGHVLCDLATAVAPFIVRPSLWGAASRGEEHRMRARQADFVLLFFHFVKKKHNLLSHSERAALDMPEGDLVASLVATVVPAASQASPGFSPALILRNPTTTQSTQSTPQIGKMGLPSSAQHDRSPASPRGVVGVGGVTAAHLTPGGISRSSSAPGSAGMSRAQSVESLVVGGDVTQGGGSASAASARGGPTLQPKRGGSTRQRRPYFEVWVDALPITPLTLAAPLQSINSCHSRTVARSGNVTTQRRRRLHPFLVGDDDTPATNEQLETAAPSLPQSPFQPQHQQQQQQHSVQSIATTLVTAAPHPPQSTFTVPSHSRVSIDYGLQQREERTTEDLIGDLLESDPERQVRVVFPPRLSDTSVENEGRVIPAWLPLDQRAIYFLKDAPRFLQWLRAPALPCPSSHNTVAGPGASTTYSDVAFRQNIIPPVDLASVLSHPSWDAHTASDSTINGAKGVGNRGGNGSSASASAVLSSAPTRGISALLEGHKGKAAGGVRSARTTSDLNRSAGSRSATFVVAANYDRPLPFPRTTHPEASPHSGALTKGSAADAQRASFARSLDGIWAIGAPTKATFAFDRETDLLNHRPPVKPPTPASRCEHCDSPLSQLGARRYMCAYCGRTLCAACCDRSFVVPGHVLATGEFAPRRVCAACEGHLQAHLYSPLLELDRMTAAAAEQIGRLRVDRIRIDREKITRAIYFCMVPQPQSEAMLPSNVSPFTMQGSRRSFGTSAQQGLGQGSSSGSASGGATKSAGGCADIVPDNSFENFGAYLLRTEGVATEGDAADTGRGCPSLSFMLALLPPRIASLVRQYPGTSGARVSLADVCEMQTRHFADVVDRLRRLFVGHTQRCPYCRVVATARRCCARDKCIWALSRRGSISVDNRTTPTDGDGSHVPRKMSQSPQPTPPAPLAALPFKSYGTAESPVLCRLCLQYSHACCVDKEGRCCATCACVPEERVRVLFDVNNGQHDVRQRSATRLSSVSAPGQISLVSAGSIAPSTPKGAVRHADANPFADSQRDANTGKDSAESAAAQRKAVDSSPLWDGADQSHF* # ORIGINAL: g3770.t1 original gene structure, not modified by PASA NODE_1150_length_13528_cov_44.0474 AUGUSTUS gene 11072 13174 . + . ID=g3770;Name=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS mRNA 11072 13174 . + . ID=g3770.t1;Parent=g3770;Name=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 11072 11178 . + . ID=g3770.t1.exon1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 11072 11178 . + 0 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 11618 11689 . + . ID=g3770.t1.exon2;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 11618 11689 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 11876 11947 . + . ID=g3770.t1.exon3;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 11876 11947 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 12275 12346 . + . ID=g3770.t1.exon4;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 12275 12346 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 12489 12560 . + . ID=g3770.t1.exon5;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 12489 12560 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 12749 12820 . + . ID=g3770.t1.exon6;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 12749 12820 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 13099 13174 . + . ID=g3770.t1.exon7;Parent=g3770.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 13099 13174 . + 1 ID=cds.g3770.t1;Parent=g3770.t1 #PROT g3770.t1 g3770 MALLFQPKLAIACPDTCTCNGGTVVSCAFSAGTTALYWSGKQITSLSSGLFGAIPGLDYIDLSGNQLSTIPVGVFDNLPALTKLSFLSNQITTIPPGIFDKLANLTNLVLSSNQIAVLPSGLFDNLVALNQLAMKDNLIVTLPNGIFDKLTKLNNLDLIQNRIAEFPTGVFDKLVVLRQL* # PASA_UPDATE: g3767.t1, single gene model update, valid-1, status:[pasa:asmbl_570,status:12], valid-1 NODE_1150_length_13528_cov_44.0474 . gene 240 2241 . - . ID=g3767;Name=g3767.t1 NODE_1150_length_13528_cov_44.0474 . mRNA 240 2241 . - . ID=g3767.t1;Parent=g3767;Name=g3767.t1 NODE_1150_length_13528_cov_44.0474 . exon 2112 2241 . - . ID=g3767.t1.exon1;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . CDS 2112 2241 . - 0 ID=cds.g3767.t1;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . exon 1708 1916 . - . ID=g3767.t1.exon2;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . CDS 1708 1916 . - 2 ID=cds.g3767.t1;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . exon 916 1500 . - . ID=g3767.t1.exon3;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . CDS 916 1500 . - 0 ID=cds.g3767.t1;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . exon 240 670 . - . ID=g3767.t1.exon4;Parent=g3767.t1 NODE_1150_length_13528_cov_44.0474 . CDS 240 670 . - 0 ID=cds.g3767.t1;Parent=g3767.t1;3_prime_partial=true #PROT g3767.t1 g3767 MKFGKHLQAQMDPEWSIYYLDYHGLKKLVKQLAKEQKEAASGGALVGSYDARGTSLSVLKRGNDGGVNANESGEVSFLSKLDAELEKLNSFTSMKGNEIRGRVADIQARVSKANVNDHDAVAQLLDSIDRSGRELLRLEKFVNINFTGFIKICKKHDKFSQVLCKPYFLVKLRSQPFLSGKYGDVIVQLSSLTDILRGDATNRTRKGADGGAQNFVRKTTKYWVRLEDVTRVKWLVLQHLPLYQFKKSQNDADLISSVYFDNDAMTLYQGRLEKTDGAIAFRIRWYGSDVPEEVFIERKTHKDSWAGEVSVKERFPLKKKHVMNFLRGTYKKDKIVKKMRDSGKKEKDIAEFETLFDEIQQVVDTKQLVPKVRTQYCRTAFQLPNDATVRVSIDTNLCMVKEVVEEGKWYREAHNVQESDICKFPHAVLEIKLQMQMGEDPPQWVSDLVDS # ORIGINAL: g3768.t1 original gene structure, not modified by PASA NODE_1150_length_13528_cov_44.0474 AUGUSTUS gene 3187 4116 . + . ID=g3768;Name=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS mRNA 3187 4116 . + . ID=g3768.t1;Parent=g3768;Name=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 3187 3266 . + . ID=g3768.t1.exon1;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 3187 3266 . + 0 ID=cds.g3768.t1;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 3371 3509 . + . ID=g3768.t1.exon2;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 3371 3509 . + 1 ID=cds.g3768.t1;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 3638 3791 . + . ID=g3768.t1.exon3;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 3638 3791 . + 0 ID=cds.g3768.t1;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS exon 4007 4116 . + . ID=g3768.t1.exon4;Parent=g3768.t1 NODE_1150_length_13528_cov_44.0474 AUGUSTUS CDS 4007 4116 . + 2 ID=cds.g3768.t1;Parent=g3768.t1 #PROT g3768.t1 g3768 MEHFNNIEKAIATLAECAGHEHMAVIAKVHQEIEAVLEKHRCHVDFDRSMEDAIASSVDNSRALAAAIKDLHEALQDEVDADPSLMCETPLVMAPRNGTTTRVHFEAELQALAARASQSQDDYNDVMREIASRYAHATNDLARARAELHNAEAAANKKCL* # ORIGINAL: g13695.t1 original gene structure, not modified by PASA NODE_2758_length_5205_cov_42.7957 AUGUSTUS gene 82 5034 . - . ID=g13695;Name=g13695.t1 NODE_2758_length_5205_cov_42.7957 AUGUSTUS mRNA 82 5034 . - . ID=g13695.t1;Parent=g13695;Name=g13695.t1 NODE_2758_length_5205_cov_42.7957 AUGUSTUS exon 82 5034 . - . ID=g13695.t1.exon1;Parent=g13695.t1 NODE_2758_length_5205_cov_42.7957 AUGUSTUS CDS 82 5034 . - 0 ID=cds.g13695.t1;Parent=g13695.t1 #PROT g13695.t1 g13695 MSETRVERPKFGGLPNEKVSVFFRKWASYEEGLRSVLTDRQRAMQTMEACDANISARVSAIVAQLFAVSTNELRVGPLDSPALVRIALWSEYGIVARALEVRDASERPSFSMQFDRVGAKAAEASLEWLEESMVTLAPTVAARLLVRKGFRDVDALAIKADDDGSLERYRRWLEEVQTNRSAEFARALVLTMSNPVVHMAFAMWPKTFGKELSEAYNALRHFIVTRFGKTTFGLNLLTKYLELGGVEEAIVLLRQARDGGQLDALFGQRGKARAGGDESMTTTERSKSSGGAKPPSTGNQGQSGGNARGPGTPNKPRGEVGGSGQRGGASAREERPRDGVRRCHKCGSPDHLIRDCPVEKGQGSGSVAAIAATAEQPARADDKGMPKPLTDGESDEEYFPKGWVRSGMLSVDGVRSKRTATVLLDTGSATCAVSLRACRLLKIPFVKNGEGAVKDDLSFEGIGKGVVRAAGRIADGVELHVADWQTVSLGGMRVFKELPGNTDVLLGYGKLRRMGIITTSASRASTVAEHPRTTASIEAKRVAEAEKSESQEPTSTVAAVAEQPQDATFADIAGERLAAREDDSIGVDDAMLSVWLPDGERTTVERGDFEHLRAAGIPVAKIDEVIAAINERGWRDGARLGMDFPPAELKIREGAPPTRIYYPLRSPAKRVALRADIDKALAGGLIRRLTKEEAKRVRYVTVPSLALKPDGTYRMAIDFRNINPFIIVVERTEIPKEEEFLSHLAENNVFSVMDAVKGYWQRRLSKDSQLLTAFLDTSTDEWAVYVWTVVPFGITNAGDLFQDAMSRCLRETRARAYIDDIGVGSKTLAQHVEDLLGVLAALRERNVFLRIAKCQFFKSEVIALGRQVSAAGVSIPEKAMQGIRDLAIPKSRDDVRSVYQALTWWARFVPNFAIIGAPLSDLLKSDRRFKWGPEQQAAYDALKSAICGARPVLPPDYAHPMVLTTDASRVGVGAVLYRTDGGERRVVACASSKWSAAEANYRHVGELEALGIVWGALKFESYLMGVAHPFIIETDHQPLVTLFGSYNRISSSVTRRRILRWAEILAQFNFRIRHVPGTQMGMTDALSRLPSTQDALLEGRSVATVAAVVGVDGTGGVKDTEADTQAVVVRAGGDNKVRRQQAIEALVRIIHEQLSHAGTARVEAHIRARYSDWDDVRNIVRSVVKTCLVCQTAGQAREHEMVVPLRPLPIVTRPMARVAVDLLSLARSTGGARYVFGAQDAATKFMWLVPMTAKAAEDIVLVFMANILPWGVPVRVHHDAGTEFDNDVFEAFCKSYAIERHVTSVDRPQANGQAERVFSTAIDWMRKDMTHHQTERWEYSVARVANAYNNSVNSTTGKTPFELMRGELPQLPVDRQIGWTPAVRFVDENGLRERLTAAQDTQREAADQRATVIAAPTYTTGDRVMVRVRSGERKHKMAARWSGPFPVDKQIDADKYAVKTGRRCVTVHVTDLKHYEASETAPSNTTAIVTEGTSQDTSVPVDTFTIPASADAPDRTVGMAGTAAFTTWVWTHPWVAGTPADDVAQTRAALSTKAGRDFTYALGSPLRGWFAYCGSIGRNTTTSPTDEEMDAWLARTGGMDNTKSQMRYAVRRAYRFVHDAAFRHGQVSRLLGRMAGQGSATREGGARDRR* # PASA_UPDATE: g14360.t1, single gene model update, valid-1, status:[pasa:asmbl_693,status:12], valid-1 NODE_1187_length_13280_cov_38.8548 . gene 10393 13193 . - . ID=g14360;Name=g14360.t1 NODE_1187_length_13280_cov_38.8548 . mRNA 10393 13193 . - . ID=g14360.t1;Parent=g14360;Name=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 13158 13193 . - . ID=g14360.t1.exon1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 13158 13193 . - 0 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 12873 13053 . - . ID=g14360.t1.exon2;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 12873 13053 . - 0 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 12670 12726 . - . ID=g14360.t1.exon3;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 12670 12726 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 12461 12517 . - . ID=g14360.t1.exon4;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 12461 12517 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 12234 12287 . - . ID=g14360.t1.exon5;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 12234 12287 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 11911 11946 . - . ID=g14360.t1.exon6;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 11911 11946 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 11520 11552 . - . ID=g14360.t1.exon7;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 11520 11552 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 10996 11123 . - . ID=g14360.t1.exon8;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 10996 11123 . - 2 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . exon 10393 10832 . - . ID=g14360.t1.exon9;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . CDS 10728 10832 . - 0 ID=cds.g14360.t1;Parent=g14360.t1 NODE_1187_length_13280_cov_38.8548 . three_prime_UTR 10393 10727 . - . ID=g14360.t1.utr3p1;Parent=g14360.t1 #PROT g14360.t1 g14360 MNVSTICLSGNLNYETDEWGGDDEWDEGGDQGDQNAGYNAGGYGAAPPPPPMGGHGAPPPPPPMGGAPRPPMGGAPPPPPMMGGPPRPPMGGGAPPPPPMMGGPPRPPMGGGAPPAPPMMGGPPRPPMGGMGGAPRPPMGGMGGPGARQSMAAPGGGAPPPPPPPPMAAAPKKHMVRALYDNVADDAQELTFNAGDLIEVISKVSDEWWSGMINGEQGIFPSNYVEPA* # ORIGINAL: g14357.t1 original gene structure, not modified by PASA NODE_1187_length_13280_cov_38.8548 AUGUSTUS gene 147 299 . - . ID=g14357;Name=g14357.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS mRNA 147 299 . - . ID=g14357.t1;Parent=g14357;Name=g14357.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS exon 147 299 . - . ID=g14357.t1.exon1;Parent=g14357.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS CDS 147 299 . - 0 ID=cds.g14357.t1;Parent=g14357.t1 #PROT g14357.t1 g14357 MGREAARAALDDAGIPYQSVEAVVASYCYGEPTCGQRAIYELGLTGIPVFN # ORIGINAL: g14358.t1 original gene structure, not modified by PASA NODE_1187_length_13280_cov_38.8548 AUGUSTUS gene 1869 3704 . - . ID=g14358;Name=g14358.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS mRNA 1869 3704 . - . ID=g14358.t1;Parent=g14358;Name=g14358.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS exon 3442 3704 . - . ID=g14358.t1.exon1;Parent=g14358.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS CDS 3442 3704 . - 0 ID=cds.g14358.t1;Parent=g14358.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS exon 1869 3294 . - . ID=g14358.t1.exon2;Parent=g14358.t1 NODE_1187_length_13280_cov_38.8548 AUGUSTUS CDS 1869 3294 . - 1 ID=cds.g14358.t1;Parent=g14358.t1 #PROT g14358.t1 g14358 MSPSPVLSPHSRGAAKSVESPFVADHDGDGALAQSAPTRNAFSKLVWRQCTGGLRHMHRRYSGMQARDQGKVAPRSLASRFYDACPSRLCIPFRDILDGGGKISSGCVVLGFSRVHGLIISYSCVAVLPFSAPTGAGAAAPTFTAEPDSTTYSYTLQLWHFRPHKRLCLAGEIGLFRCRDIRSQLLISVTECEGGSRVVVHGAESTAVPSTYRDERRQCHVTIVDISSLIDGSPLPAVDSAVPCLHLVFALPDRYAYVPAISARIPDAFIMNTGDGVSVFFWRRYSSRLSTGDAMERRGETHHTNAKGVGATDSKVISSQMGTPCVHTRCRLFGEDGQETERDNGNANHPHAQTTSGFCGMSSMHASGACKVREVRMDAEQFLSHALAREGKYSPVDYDVRLVDMTADGHLLVLVIVQVRVRCDDDVDVLTLSGIPDRARFRIAWLLDMDTHLNTAKDMAESPDSSVDLDGDDDKQRGCDSVHTVRRWQPVACERLDRESWRDIQADLRRMGLVGMPRAPWSTPVTMTNIAVLRGQSLDHFIHPSQPIAVVFHVANSVSGSP* # PASA_UPDATE: g14359.t1, single gene model update, valid-1, status:[pasa:asmbl_692,status:3], valid-1 NODE_1187_length_13280_cov_38.8548 . gene 4718 10104 . + . ID=g14359;Name=g14359.t1 NODE_1187_length_13280_cov_38.8548 . mRNA 4718 10104 . + . ID=g14359.t1;Parent=g14359;Name=g14359.t1 NODE_1187_length_13280_cov_38.8548 . five_prime_UTR 4718 5015 . + . ID=g14359.t1.utr5p1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 4718 5161 . + . ID=g14359.t1.exon1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 5016 5161 . + 0 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 5378 6519 . + . ID=g14359.t1.exon2;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 5378 6519 . + 1 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 6774 6874 . + . ID=g14359.t1.exon3;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 6774 6874 . + 2 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 7206 7354 . + . ID=g14359.t1.exon4;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 7206 7354 . + 0 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 8040 8156 . + . ID=g14359.t1.exon5;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 8040 8156 . + 1 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 8283 8454 . + . ID=g14359.t1.exon6;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 8283 8454 . + 1 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 8951 9436 . + . ID=g14359.t1.exon7;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 8951 9436 . + 0 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . exon 9769 10104 . + . ID=g14359.t1.exon8;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . CDS 9769 9942 . + 0 ID=cds.g14359.t1;Parent=g14359.t1 NODE_1187_length_13280_cov_38.8548 . three_prime_UTR 9943 10104 . + . ID=g14359.t1.utr3p1;Parent=g14359.t1 #PROT g14359.t1 g14359 MGTAEDEGNVNTPLLYAPANETTYAAGELGGTTLGDPSGECVHTFTYVRPSVSVAIRRADSTRIKDQKTGADYPLNASPSALVPYGAGLPLMLEFEAFCAVLAFVFACIYGIPAAVMNHDGHLGKMDASDIFDNCTRTPDFSHPPMYGWFLGNRVEMPGWPYFAVDAVAFLLFVAVSLCFRKRLSEHAQLYGSELQSVRAYTVMCKGLPANATDASVFVEYFSRWGRVARVTVSLDSMRIMRLMDKRHRAVMDLDVQFAKQAGDLYWWLERLWYGARGIDPVERAKNRLARIDAHIYAIKQTRVFRCTGYAFVTFATPQQAAGCLAFHNGGGMILRTFDSFMRCLACRPPARTFMGRAINVKPPPEPSDIMWQNLDVKLFARIVRNVTTGLVMLFVVALGFSATLAVILFSDLRRESETKTFIEKYGTKLAVGLDVIFINWVLSVIVRGLCAWEKHHTHSSLQIAAATKLFICSMTNTAYSVFAAYLALAAMSADPTDRDLQKAPAAFGTSFWYSAQGASGHIFWSIVTGVAMMMGLQVFRPVSLTRKAIARLTSVTQQQLDEGMKPEQPDLPARHVTAVVAVYTSMFYASQMPLLPFVAGCALTFQYMLDKYNLLRRQRPPPKTNGRVTLLMMRIVTWAASVHVLLSGLSYVIGPWCNASDPIVFRDFFGTAVNVNTSMLGSESGDSVKEGGLDLLWWHVWVFGWLCAALAVFFLQGLLRCTLCAIKDVSMSMILGRVSGLPGWEAEWPEYETLIAQGAEDYKAPITVDEVSLRETRTEANEYAQLLNGTLREIDAVVGAAVDTVKVAVARADAHWSILMSSTTAPH* # PASA_UPDATE: g740.t1, single gene model update, valid-1, status:[pasa:asmbl_5244,status:12], valid-1 NODE_2924_length_4727_cov_38.4297 . gene 152 845 . - . ID=g740;Name=g740.t1 NODE_2924_length_4727_cov_38.4297 . mRNA 152 845 . - . ID=g740.t1;Parent=g740;Name=g740.t1 NODE_2924_length_4727_cov_38.4297 . five_prime_UTR 797 845 . - . ID=g740.t1.utr5p1;Parent=g740.t1 NODE_2924_length_4727_cov_38.4297 . exon 152 845 . - . ID=g740.t1.exon1;Parent=g740.t1 NODE_2924_length_4727_cov_38.4297 . CDS 152 796 . - 0 ID=cds.g740.t1;Parent=g740.t1;3_prime_partial=true #PROT g740.t1 g740 MSHLLKYALAAAGASAAAAFVALVAYRLGRRHATHPSDAPKVKDVLRRLNADFTVTSSELHDICDHMVNEMKRGLTDQGSSMMMLVSHVMELPRGDEEGEYYALDLGGSNFRVLRIAIDGKGKCATESRKYQNSEAAMTGTGDMLFGFIADCVKEFAPETVGCDHSRPLGFTFSFGVKQDRLDSGVLLGWSKGFSATGVVGQDVVALLQKAFHER # PASA_UPDATE: g741.t1, single gene model update, valid-1, status:[pasa:asmbl_5245,status:12], valid-1 NODE_2924_length_4727_cov_38.4297 . gene 1389 4612 . + . ID=g741;Name=g741.t1 NODE_2924_length_4727_cov_38.4297 . mRNA 1389 4612 . + . ID=g741.t1;Parent=g741;Name=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 1389 1856 . + . ID=g741.t1.exon1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 1389 1856 . + 0 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 2291 2367 . + . ID=g741.t1.exon2;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 2291 2367 . + 0 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 2680 2746 . + . ID=g741.t1.exon3;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 2680 2746 . + 1 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 2952 3029 . + . ID=g741.t1.exon4;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 2952 3029 . + 0 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 3356 3546 . + . ID=g741.t1.exon5;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 3356 3546 . + 0 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . exon 3942 4612 . + . ID=g741.t1.exon6;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . CDS 3942 4353 . + 1 ID=cds.g741.t1;Parent=g741.t1 NODE_2924_length_4727_cov_38.4297 . three_prime_UTR 4354 4612 . + . ID=g741.t1.utr3p1;Parent=g741.t1 #PROT g741.t1 g741 MSIPISALIHVRQFRESYVSLLNTDDVVKRLAEIHAEIRVNRNRDNNNNNNNNAQAAASAGGAGGGNAAVHGAGPAGGGPITQQLQRIQPPHPSHPSHPSHPQQQPHQQQPPQPQLQLQPSQQQQLQQIGQRSLALQSQQQQQLQQPQQLRNYPLNCDAEPDLRSEFSIDNIPAGVDLACLKDVASLTSLSRRKREINYAAQPKRSADEPQTRVAMPEAVLSVAIYQPGKVARLQEYLVLGSQTLQDLRDKIHCLSDGVLEAERFPSAFFFIENVFYNDMRHPLAKDLAAGIITWASAPNRVLQSELATFTSRSMADTKFIDMSVRLGYPYLYVHQGNCEHALVFKDLRLYSPDADGRCVEDFPVHVFACKTRRRKCRVCDIYPARHVTYNDRLAFENPCFFCEHCFKQLHCAADGSYLYEFEVYPYYHE* # ORIGINAL: g3051.t1 original gene structure, not modified by PASA NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS gene 1 196 . - . ID=g3051;Name=g3051.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS mRNA 1 196 . - . ID=g3051.t1;Parent=g3051;Name=g3051.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS exon 1 196 . - . ID=g3051.t1.exon1;Parent=g3051.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS CDS 1 196 . - 0 ID=cds.g3051.t1;Parent=g3051.t1 #PROT g3051.t1 g3051 MLSSLLQYEKSSGFDIPTNPFDLVIYIRNGVGKDLAEEEQKNLYIAAVAFLEAERRQPVAVAPTA # ORIGINAL: g3052.t1 original gene structure, not modified by PASA NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS gene 432 1085 . - . ID=g3052;Name=g3052.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS mRNA 432 1085 . - . ID=g3052.t1;Parent=g3052;Name=g3052.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS exon 432 1085 . - . ID=g3052.t1.exon1;Parent=g3052.t1 NODE_5004_length_1085_cov_26.5574_potentialcontaminant AUGUSTUS CDS 432 1085 . - 0 ID=cds.g3052.t1;Parent=g3052.t1 #PROT g3052.t1 g3052 SEEVTANEISENTSYLFDFRKNALDIAHNVEGYGQKANTHPYMNYFGYSRGQTLGDNYLKHIPLLGRNPDSVIMMDDALRSFVFTPRSAILVDQFVTKNDNDTFLRDIMPMLRAVAKADSACRELDHWRHDDYHKFDNLDEVMMKSARAHPGDKLQNDMLHLGSFLKERRGCGTPISEAKLFGERYLKDVLPQVNAEVQHMQGQHIDTAHGFMHLFR* # ORIGINAL: g9595.t1 original gene structure, not modified by PASA NODE_3574_length_3178_cov_38.2759 AUGUSTUS gene 98 3100 . + . ID=g9595;Name=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS mRNA 98 3100 . + . ID=g9595.t1;Parent=g9595;Name=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 98 290 . + . ID=g9595.t1.exon1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 98 290 . + 1 ID=cds.g9595.t1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 677 819 . + . ID=g9595.t1.exon2;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 677 819 . + 0 ID=cds.g9595.t1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 1107 1576 . + . ID=g9595.t1.exon3;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 1107 1576 . + 1 ID=cds.g9595.t1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 1828 2223 . + . ID=g9595.t1.exon4;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 1828 2223 . + 2 ID=cds.g9595.t1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 2439 2837 . + . ID=g9595.t1.exon5;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 2439 2837 . + 2 ID=cds.g9595.t1;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS exon 2988 3100 . + . ID=g9595.t1.exon6;Parent=g9595.t1 NODE_3574_length_3178_cov_38.2759 AUGUSTUS CDS 2988 3100 . + 2 ID=cds.g9595.t1;Parent=g9595.t1 #PROT g9595.t1 g9595 NDRGQIGEDRPEVLYSVYPVTLRETEHASYENFIVKVVSGAHHTVALTRAGKVLFFGSGMGFYSSVLTELRGPLEGRFIIDAAAGGGYTIFITAEGVPIVFSDMPSLGLASGPVRGFPENVRIAKAAVSYIGAAFATDRSIGARFAAVARVDHVSYYTVAEDAGYLDILVERLVDPDDIQGVNATFSTDVSVWRPDTAVARLGVDYIVPNSTVVTWLAGDRALKTVRVTIVNNDVYSGEMWFRLSLGDSDRVTTHEYAHVDIADDGDAGTLQFAVTDRRLQRMESSGTVLIRVERTRSASGRAAVDVEIDSVLSTAIVFNQTIGKIGTQFDADTADCAFVRTTLMWESEDQTPKYIAVGLLNNGVYASPPRKLVLRLVNPSVALADNSTCEIVILDDGDRGYVEISSSISPTLTGSSVQLAVTRRWDGPLGSVRAYGDIAATFRLIRTDASMDSVVGALNAPVVRWGNGAYGLRTVEWSLDTTTLGFLDSVSGSAVHVEVVPLYRYTYSDGGENSSCDVGPTARVALGVIRTSASSESWKFGIGIGVGLAAVVMISAVAVGIGRAAFFIL* # ORIGINAL: g2858.t1 original gene structure, not modified by PASA NODE_7800_length_406_cov_82.0514_potentialcontaminant AUGUSTUS gene 1 332 . - . ID=g2858;Name=g2858.t1 NODE_7800_length_406_cov_82.0514_potentialcontaminant AUGUSTUS mRNA 1 332 . - . ID=g2858.t1;Parent=g2858;Name=g2858.t1 NODE_7800_length_406_cov_82.0514_potentialcontaminant AUGUSTUS exon 1 332 . - . ID=g2858.t1.exon1;Parent=g2858.t1 NODE_7800_length_406_cov_82.0514_potentialcontaminant AUGUSTUS CDS 1 332 . - 0 ID=cds.g2858.t1;Parent=g2858.t1 #PROT g2858.t1 g2858 MLTRVHTLNLSLTSVTDVSMLGGVHVLDLSFCKNVLDVSALGNVYDLNLTGCLVSDVSMLGRVHALNLSFLRVSAHDLACLAGVHTLNLTYCKELVDVSALFGVHTLILD # ORIGINAL: g7162.t1 original gene structure, not modified by PASA NODE_1711_length_9573_cov_47.8225 AUGUSTUS gene 4079 9483 . - . ID=g7162;Name=g7162.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS mRNA 4079 9483 . - . ID=g7162.t1;Parent=g7162;Name=g7162.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 5490 9483 . - . ID=g7162.t1.exon1;Parent=g7162.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 5490 9483 . - 0 ID=cds.g7162.t1;Parent=g7162.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 4079 5331 . - . ID=g7162.t1.exon2;Parent=g7162.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 4079 5331 . - 2 ID=cds.g7162.t1;Parent=g7162.t1 #PROT g7162.t1 g7162 MAPPRKNSRQAKAHPKPRPTAATPKPTTATTPTSTTATPTPTAAIPTPKKRNQGQPKTPATASTDVRVPTAMSIKQTSARIQKKHTGKKAVAAATAAAAAVDVAVAVADAVTPRVPPAATARPVQRNSSAADGAPMDADDGIDDEDSDAHVPSAEGEGYITELFDGLLRDQAPEGATRIRNVIEPLRERYETVVRKLFSVHGVLLLGNNRLGKTFILNILLMLSCVSAATYKSEAFQKGRASLGNSQLEAYEDEMAQDGVGNRTDDDDKAGGRGKGKNKGRKDGGHQEIEIIRLEDKEGRRFTEAERLSQRASTYKVFREHADGDFGKDGNVYISEKNPWNGFILRSATRDSLGTTTAIHNRIRFGYTFQVYLVYQSLDFIRQVLVAVAKKYVDGESVDSISMYRWEQIVGTEIRSVTEEVLRGYIADPSTIPIHADVREVAGRRIIYAGRGEYLDADRWYVQHILQDINGKPHTSKTDDAEAKKQAEEETKKLWRQRVVLEDVITYTPCSVVSNGVEAIDAPGLDDTDPLSKAVLRECEEEASTKTVIAVTDKELGANEVLELQLNKSPFTKRLIEKPAEHRLVFFIYAERNSSPNLHTVMDDDDYKQYNILWQKSEEKSRNSVVKMFDNLVRGMYPGISVTARNAKVDAALASVQFVSGFPLLAASFLLNEPLRQAVIAYRQYKDDSEDFDREVLRRTRGLELFGILQSLVDSQMHAEMMRSMDTLQRVEEIALEEMRESPAPANVGVDMQRAAFFPEAALNQAKRLRMNVLNKGKLSKFAADVNTALRDSEIAQRFDTRWKATWAKCRDDYLRPYAAHAKSDAEARWSALGTRLTRRNAMTLLGRVSKGRHDDLDLLEVVFGKHEEAPVDAIRHFLGDVHAALTSMASDLETQFHALLRVHVTTLFDDEIIAHTEVLLKEFLDESFRVDIREKMDAFVDKGRQYDKLTEAAQHHQWRLSCRKAMEVALKDCMDLVQKADTDEQLRNSVKNVFGKTIERTVRLFWDAIGDKMARHAHVQWVEIAGYESATGRVHGRRAPLMRRSIQLFCGRVWDKGSKGAAAAAEQATGNVADADATQARMAVNAYARSCKVRAHKIIEEIKRMGSAKPDIAAVGQAFVDRQRLNYRQLDLTIAMGTAAASIPPRREARGIALHVEPQELRTYPGLRKQGTLRAPPSSRLCATEAQIRADVAKSGLRLADAAGNGYLFDELVRCVYGEGLSAEQWLAARDNIHLKSLLFQAKAVLRRASSEANFTERTGLPIGDWIGLMRRPDAPFDEMALRLAHQAINECDLAVNIWVGTETDRPNVYQIPSKRQTDKSINIAIIASEDGADHRLPYRHTFRAVLPTSRRSTTHVTAPPTPPMVPARTIKPLTHYAVVLDTSAVMGIKFAELAKAVHDLARSNCAVIAFYAHIAVLDELDSLIKVPRTAREARQRRDTMQRMIDDRLLELIYNAENDEMRMELDLSVESNIRPEFQKRDRSRLNDLQIMNSAMARRDVYPDRTLFWTDDKMMVLEMTGLAGTDRAAGRARVCTLETDGVRRAVEGRDFTRLFNCSSTRSRSVDDRPPTENTGLGASANSGRSTGAHNAHATNGSRRSREYDRDSDEAHAKRPRLEKDADVPLERRSTAPTAAHAQPKGRVLGMDASQSSSTPALTYEQVGRGRTSERTGDADKASRKRARSVERSDAEEDREEGEIDSSCKRNSRDARQSARDARGRGTSDDYRRGSDVGRWKAGGREDSGSRRR* # ORIGINAL: g7161.t1 original gene structure, not modified by PASA NODE_1711_length_9573_cov_47.8225 AUGUSTUS gene 370 2645 . - . ID=g7161;Name=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS mRNA 370 2645 . - . ID=g7161.t1;Parent=g7161;Name=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 2522 2645 . - . ID=g7161.t1.exon1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 2522 2645 . - 0 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 2182 2318 . - . ID=g7161.t1.exon2;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 2182 2318 . - 2 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 1853 1904 . - . ID=g7161.t1.exon3;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 1853 1904 . - 0 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 1610 1665 . - . ID=g7161.t1.exon4;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 1610 1665 . - 2 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 1210 1323 . - . ID=g7161.t1.exon5;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 1210 1323 . - 0 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 986 1031 . - . ID=g7161.t1.exon6;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 986 1031 . - 0 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 666 757 . - . ID=g7161.t1.exon7;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 666 757 . - 2 ID=cds.g7161.t1;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS exon 370 503 . - . ID=g7161.t1.exon8;Parent=g7161.t1 NODE_1711_length_9573_cov_47.8225 AUGUSTUS CDS 370 503 . - 0 ID=cds.g7161.t1;Parent=g7161.t1 #PROT g7161.t1 g7161 MGDNSATAVAHRLRAHAERFIAQNDFASAAYWAEKAVTLTEGSITDVHLLARCHMLNGHAARAIHTLKSRHATGKSVCCRLLAARCHIVRKEWDDVSTLLGTGPVEMSGVDAALVEAGTTSEQVASQVYLLRGIAAQALDNKQRATECYRDALTADPYCVEAMERLTTSHLMNEAEEDALIASLSFGSACNIDKEVVEFLYKGQTKKYNKPGPETSRPPIELLGNSCDARASLADAYQYKYDFTKCHAITS # PASA_UPDATE: g895.t1, single gene model update, valid-1, status:[pasa:asmbl_4003,status:12], valid-1 NODE_2306_length_6780_cov_34.5229 . gene 4747 6624 . + . ID=g895;Name=g895.t1 NODE_2306_length_6780_cov_34.5229 . mRNA 4747 6624 . + . ID=g895.t1;Parent=g895;Name=g895.t1 NODE_2306_length_6780_cov_34.5229 . five_prime_UTR 4747 4860 . + . ID=g895.t1.utr5p1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 4747 5010 . + . ID=g895.t1.exon1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 4861 5010 . + 0 ID=cds.g895.t1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 5218 5318 . + . ID=g895.t1.exon2;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 5218 5318 . + 0 ID=cds.g895.t1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 5557 5712 . + . ID=g895.t1.exon3;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 5557 5712 . + 1 ID=cds.g895.t1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 5824 5959 . + . ID=g895.t1.exon4;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 5824 5959 . + 1 ID=cds.g895.t1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 6098 6253 . + . ID=g895.t1.exon5;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 6098 6253 . + 0 ID=cds.g895.t1;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . exon 6520 6624 . + . ID=g895.t1.exon6;Parent=g895.t1 NODE_2306_length_6780_cov_34.5229 . CDS 6520 6624 . + 0 ID=cds.g895.t1;Parent=g895.t1 #PROT g895.t1 g895 MASGEVDPLFDVRTTYYVGNFSQCIKEAQNFRGPAAVEAKGYLYRAYVAQGQYGVVLSEINDSAPMELRAVRTLALYLQREANRDNAVAAATKLLTDPSAASNPTVNVILATLFAQDGDTDSALRALHETPASLECTALAVQILLRMDRVDLARKELKRMQEIDDDHTLTQLSNAWVNLHTGGDKYQDAFYTFQEMTEKFGPSVFLLNGQASCLILQNKFAEAEPILQSALEKSGGDPETLINLVVASQQLGRQAEVRVCRMYAALF* # PASA_UPDATE: g894.t1, single gene model update, valid-1, status:[pasa:asmbl_4001,status:12],[pasa:asmbl_4002,status:12], valid-1 NODE_2306_length_6780_cov_34.5229 . gene 77 4358 . - . ID=g894;Name=g894.t1 NODE_2306_length_6780_cov_34.5229 . mRNA 77 4358 . - . ID=g894.t1;Parent=g894;Name=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 4245 4358 . - . ID=g894.t1.exon1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 4245 4358 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 3980 4101 . - . ID=g894.t1.exon2;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 3980 4101 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 3785 3876 . - . ID=g894.t1.exon3;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 3785 3876 . - 1 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 3293 3657 . - . ID=g894.t1.exon4;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 3293 3657 . - 2 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 2719 2841 . - . ID=g894.t1.exon5;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 2719 2841 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 2373 2531 . - . ID=g894.t1.exon6;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 2373 2531 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 2109 2172 . - . ID=g894.t1.exon7;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 2109 2172 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 1821 1891 . - . ID=g894.t1.exon8;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 1821 1891 . - 2 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 1510 1567 . - . ID=g894.t1.exon9;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 1510 1567 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 1141 1316 . - . ID=g894.t1.exon10;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 1141 1316 . - 2 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 727 887 . - . ID=g894.t1.exon11;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 727 887 . - 0 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 426 457 . - . ID=g894.t1.exon12;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 426 457 . - 1 ID=cds.g894.t1;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . exon 77 156 . - . ID=g894.t1.exon13;Parent=g894.t1 NODE_2306_length_6780_cov_34.5229 . CDS 77 156 . - 2 ID=cds.g894.t1;Parent=g894.t1 #PROT g894.t1 g894 MLLCPQTLLLYSWRRLFNYCTFEIPAPLLLSKISLTDKMADIAPTEGVKQLSLTVKTSGNKKISITVGEDITIEKLKERLAPEADVPAGAQRLIYAGRILKDADLLTSYGVHDGHTLHLVKTVAAGASASASAPPAASPTAAPAPSPAKPATAAPPAAFSAAPTAASPAAPAPAAANPLAALFGGDGGAGGLGGLGGLGAFGGLEGLGAMPQQLMNNPEAMREMMNSPMMQALTSNPDVMRAMIMSNPQMRELVERNPELGHILSDPQFLRQTMEMMRNPGMMQEMTRNSDRALSNLEAMPGGFDAMRRMYDQFTEPMFEATTGEGAPSPFATANNNNTAAAPIADGAINNAPLPNPWAPAGARTATQPQTNGTANATPSNQTPPNPLAGLGGLGMGGLGGLGGLGGLGGLGGIGGMDPGMAMDAMLNDPGMLELMSGLMADPAIMQQMIQSNPMLANNPQMQEMLRNPEAMRMLADPNNLRAMMQMQAAMRQLSGNGALPGMMGGFGGGEEMDLSRLMGGLGGGGANAFAPQQQVNM* # ORIGINAL: g11839.t1 original gene structure, not modified by PASA NODE_3418_length_3513_cov_31.5925 AUGUSTUS gene 2 3311 . + . ID=g11839;Name=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS mRNA 2 3311 . + . ID=g11839.t1;Parent=g11839;Name=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS exon 2 236 . + . ID=g11839.t1.exon1;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS CDS 2 236 . + 1 ID=cds.g11839.t1;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS exon 377 891 . + . ID=g11839.t1.exon2;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS CDS 377 891 . + 0 ID=cds.g11839.t1;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS exon 1174 1663 . + . ID=g11839.t1.exon3;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS CDS 1174 1663 . + 1 ID=cds.g11839.t1;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS exon 1841 2641 . + . ID=g11839.t1.exon4;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS CDS 1841 2641 . + 0 ID=cds.g11839.t1;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS exon 2874 3311 . + . ID=g11839.t1.exon5;Parent=g11839.t1 NODE_3418_length_3513_cov_31.5925 AUGUSTUS CDS 2874 3311 . + 0 ID=cds.g11839.t1;Parent=g11839.t1 #PROT g11839.t1 g11839 GGSLCFAEVQSTVITRSAFTAGYGEYKGGVLHSQASAVASKLTMVGCNATGNHVKYDQFGGQRGVAGALSLTGTNFSVGGFLWATNSVPESEKGLRLLPPADANQPAIVLDGITVECATAKKGGALYFSNTFAAVVRDSRFSGCTADSGGTGYLAGSSLIVLNNIVVEKGHATSGGGFIVPESASIHARQGTRFIGNSAGGSGVVSVLLEGNAVMEDFVALGNTAIYGGCIALFAESVAIMRSGNVSQNRAEDFAGGVAMTGHSKLSIHNMTFDLNYATGQGGAIRLDGETFLTGDNSVGKVGTTTMSALFSGNGASEGGAIYMSNMASVLLSFSQFDRNLATKTGGALFASGFSELRLSDSALRGNSATGGGDGGGLVYKDRAHAVLGRVTFSSNFARTGAAIAGTVDGTQSCRLEGNIAQSNGGAIGIVGYAKAVVRRSAIVGNAVTAEGDDGVGSAVYWEPLSTSPPDGVRLVQSEVSANRGVYGTVFCKTPADANATAPFAVRMEDALIGVNIAGGVNVTSAASTSPTALEIRISGSTATDILSSHSGGTLVSSALSVHVVDAYGSTTRPRGLVVQLAVAENEPLTTSDGSAWVSSPNALLSGSTEMIAPADGIASFSGVRIIGVPAKYWLVVYAPTSQAVLAGSIPVEITDAVRATPANPTQGRAFRCASPTLEQLLSPAVPRARSFPAIVLPLVFVCAVLGGLLMWRLKIAKKAASRATHEQFLEKHFKVEKEGQQLKVVEISRDDIDLMEALGQGEFGTVHKALLTAGDQPRLCAAKSMRDGTTYRERVEFIAEAEVMLGLQHPNVVSLIGVSVTVVG* # ORIGINAL: g10237.t1 original gene structure, not modified by PASA NODE_954_length_15523_cov_38.4157 AUGUSTUS gene 3953 5671 . - . ID=g10237;Name=g10237.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS mRNA 3953 5671 . - . ID=g10237.t1;Parent=g10237;Name=g10237.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 3953 5671 . - . ID=g10237.t1.exon1;Parent=g10237.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 3953 5671 . - 0 ID=cds.g10237.t1;Parent=g10237.t1 #PROT g10237.t1 g10237 MDVSMDTGEAFEPRPSLWAEICRHCPASETEEIRRVVGVSLLEQNSDLHKEVSALLDIWRDIRREIAVGHERASSGKGPKRLPEPPLVRERLRSEILFFVENLRERAAESGANAESVLAATGQDKSLLSYVMMTASHESLRRPGTASSGRQTPLRDLSTPSSAGSRTQSRMSSSSIGTTLSQSGHSASVGAAKATADDVSRIAQKKKITMHSIDEIADRLREALSRERELLLGDVAFLHDSIERSGDEMDAAVAHARRMSEVEEPSLQQLREYGTRLEKEYLSKSKANLTAGASPHSSPAKGHVAMAAQSPTHVRASVKRPVSTPSPASSASTKRRAGDASGDEGNGPGFDSCGAHAAGGLPVQPSPPPVPLGGPPRSSSSLRAKRAFGAIGSNNTTTNNAGMAAGRGSAGVGAVGGTRLARHAVGIARDGGGTSDSDNDVVMTDVRRKGPATVGSRARPPLPPKRSDSAMSVSTIILDDGVVVADAAVESESDFQLSSNDEEFFREDDPPRRTPVQSPQTGVTMTGTAGVTGTHAVVNGGQSVNPTAKSVRMRPTSAQRLRSVVQQYRTEA* # PASA_UPDATE: g10238.t1, single gene model update, valid-1, status:[pasa:asmbl_10107,status:3], valid-1 NODE_954_length_15523_cov_38.4157 . gene 6310 8212 . + . ID=g10238;Name=g10238.t1 NODE_954_length_15523_cov_38.4157 . mRNA 6310 8212 . + . ID=g10238.t1;Parent=g10238;Name=g10238.t1 NODE_954_length_15523_cov_38.4157 . five_prime_UTR 6310 6352 . + . ID=g10238.t1.utr5p1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . exon 6310 6489 . + . ID=g10238.t1.exon1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . CDS 6353 6489 . + 0 ID=cds.g10238.t1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . exon 6641 6797 . + . ID=g10238.t1.exon2;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . CDS 6641 6797 . + 1 ID=cds.g10238.t1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . exon 6973 7594 . + . ID=g10238.t1.exon3;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . CDS 6973 7308 . + 0 ID=cds.g10238.t1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . exon 7724 7849 . + . ID=g10238.t1.exon4;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . exon 8117 8212 . + . ID=g10238.t1.exon5;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . three_prime_UTR 7309 7594 . + . ID=g10238.t1.utr3p1;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . three_prime_UTR 7724 7849 . + . ID=g10238.t1.utr3p2;Parent=g10238.t1 NODE_954_length_15523_cov_38.4157 . three_prime_UTR 8117 8212 . + . ID=g10238.t1.utr3p3;Parent=g10238.t1 #PROT g10238.t1 g10238 MMASSMDEFFEALDPQAVKAAVGTTLLSLHALRKGSLSTSGVLLAWFVGYFTILAGARFWAVLFFFFFTSSFFTKVGAQRKKRLEEGYVVGGQRTAMQVFCNGAFGTVLCMILRSRSGDEQLCLDYSRYPWETVIMSAFLGHYACCAGDTWASELGILSKSKPRLITTLKEVLSVRAIACLVITILFLHSLYLALSVSLVESMGTMPWT* # ORIGINAL: g10236.t1 original gene structure, not modified by PASA NODE_954_length_15523_cov_38.4157 AUGUSTUS gene 377 3230 . + . ID=g10236;Name=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS mRNA 377 3230 . + . ID=g10236.t1;Parent=g10236;Name=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 377 484 . + . ID=g10236.t1.exon1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 377 484 . + 0 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 642 771 . + . ID=g10236.t1.exon2;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 642 771 . + 0 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 1263 1426 . + . ID=g10236.t1.exon3;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 1263 1426 . + 2 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 1629 1680 . + . ID=g10236.t1.exon4;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 1629 1680 . + 0 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 1973 2139 . + . ID=g10236.t1.exon5;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 1973 2139 . + 2 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 2434 2498 . + . ID=g10236.t1.exon6;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 2434 2498 . + 0 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 2798 2915 . + . ID=g10236.t1.exon7;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 2798 2915 . + 1 ID=cds.g10236.t1;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS exon 3135 3230 . + . ID=g10236.t1.exon8;Parent=g10236.t1 NODE_954_length_15523_cov_38.4157 AUGUSTUS CDS 3135 3230 . + 0 ID=cds.g10236.t1;Parent=g10236.t1 #PROT g10236.t1 g10236 LVKRTEKRAEAAENLQEAKESGATEDVEKFTRRLVKVTPQHNEECKRLLTLMGVPFVEAPCEAEAQCAELVKKGKVYATGTEDMDALTFGSSVLLRNLTFSEARKMPIKEFHLDRVLTDLELTMEQARLLPNAVFIDLCILLGCDYCETIKGIGPHRAITLIKEHKSIEEILKHLDAKKYPVPENWAFADARELFKTPEVAPGEQFDFKWGVPDEDELVKFMCDDKGFSEERIRNATKKLAKAKTSATQGRLDSFFTVQAPSTTPKRKADSDKGGASKKAKVALPAKGKAGASKGAPRR* # PASA_UPDATE: g10239.t1, single gene model update, valid-1, status:[pasa:asmbl_10106,status:12],[pasa:asmbl_10109,status:12], valid-1 NODE_954_length_15523_cov_38.4157 . gene 8320 15462 . - . ID=g10239;Name=g10239.t1 NODE_954_length_15523_cov_38.4157 . mRNA 8320 15462 . - . ID=g10239.t1;Parent=g10239;Name=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 14026 15462 . - . ID=g10239.t1.exon1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 14026 15462 . - 0 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 12162 13808 . - . ID=g10239.t1.exon2;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 12162 13808 . - 0 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 11806 11962 . - . ID=g10239.t1.exon3;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 11806 11962 . - 0 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 11339 11595 . - . ID=g10239.t1.exon4;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 11339 11595 . - 2 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 9286 11059 . - . ID=g10239.t1.exon5;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 9286 11059 . - 0 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 8818 9069 . - . ID=g10239.t1.exon6;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 8818 9069 . - 2 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . exon 8320 8490 . - . ID=g10239.t1.exon7;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . CDS 8369 8490 . - 2 ID=cds.g10239.t1;Parent=g10239.t1 NODE_954_length_15523_cov_38.4157 . three_prime_UTR 8320 8368 . - . ID=g10239.t1.utr3p1;Parent=g10239.t1 #PROT g10239.t1 g10239 MEILTHIGKRTRDNPKIQLPLDALFEQYDSAAVPAFTKNFTIVYLELAYARADPKERARLVPPLIRSLASRTKPHQDAILQMTMSALPAIDVPHDPAVRKPVFYGENDACAQSARIFVDFLSDVLLYESPSSSASVSSSAASVAASGTQTPTSGLLHAQTATPTAGLHVPPGLSEAAVKRIIGKRAGGIPSAEFALIKLGALRLLSEGFFSDDDAVVPLLIGAGDAHHAVVAAAETGLQRIHPNMESGDVLKRLYAALQGDAAQGRSPVGARQRPRMVGHLMKSEAGANVFPACLQVAFDCMHGTNSSARLRHVGVQMAAWMCEKTREALITAVAPVMLSGIVKMLDWIESQRQSIANAAQSARDARPSEEEAAFAMPLGGAPSAHRKDNAGGSLAGADLPKIKGACFSAIGKLARRTPQLFSGDVETLRRLFDALAREDSAVRPSVQEALSMLTVAFRDATPDVLAKVAGLLKESIERPEHQVRFAVVQYASAVFPPEDVASRYTCVLATSDSREEVRDEAKRALYIGRGWGDPIEDDDDLPPAAKRGVRWASFPTAVDYFYTRAAERRTDPKLAYAVGASTSAFDPRVYRVVLNYIRRCALYTAGSLAEDAVTAEKVRESRLEAYFGRMSETPETAAVVERYRELLEEALGPTGDADLQSVACASLYEVASALPRQFARAYADRLPWLRSFVLGPRADMREAMAKVLGVVAGGMEPSPRDAVLTSFMPTAPAPGDREKEEIKHGSLFALGTVSAAALTSLGSVPASDSVVSACTIVARCTSHPNLLIASAACDSLGEIGSRHALPFEVGTVDDDFEKVTAATTDWTKPSDKEPAPLTRRSVVDSLIQLVKTHRANPTGGSTKMTERAIAALGLLNRGDAPFAHGKRAVGFLLSLGSQKETELQFAVGEALAVAGASSAALMTAILDDVLVRQIAQGSQSMRRASSVWMLCMVKNTPAVALDADMVDAEAAAVTASCYDGAKVLQARLWDVQHAFISLLADNDEISQEVASKGLGFVYERGDEAMRKLTILPFASFPLFQSNPFRSAKELVAALAESLLTGKRQGPRGQLTDDAKLFEEGTLGKTPEGGGMSTYKELCAMANDLNQPDLIYRFMSLASHNAMWSSRRAAAFGFSTIAAGAGNELKAHLSTLVPKLYRYTFDPNPRVRETMTSIFRTIVPEQRKAVEAHMKEILEDLAVNIGNNQWRVRESSALALADLLSGRSYADFNGRLAELWGLALRSMDDVKESVRMAGDSAFKAFNRLALRLCDAAHSGPATARKATDDVMPFLLSHVAHEAKEVRNAVILALPKIAKAAGPAIGPHAASASAVLLESLSALEPQVLNYIAMRAHAGGQEEGKVVNEALDSARVAAGRSSPLMEAIELCINAMDASGVASAVTTACETARRGIGVPTRSGCARFISLLVTRHPADVRPHVRKLLKALVGAPMRDKSAPLRKAFAGAVASCVGCCDVETTDWLLAQLAEVYQRGAGTATGAGDEGSVYGDDETALAARHGSGCAAAEAARRYPDQIRGCATRILPQAFMAKFDADESVATAWGECWDELTPGNEGGSRLYRAEIVPLLCQALDSASWTVKKQSAEAMASLAETLSGGIGDSAPALLAVLVPGLSGRTWEGKDSLLKALGAVCVAGAKASTIAAEDVASKVIPVLLREAGKKDRQYKRAAVREIGSVLDAFPRLDVFDAVYACLRSAAEEGGDGRDATKDEDDPKAGPLVLLVRAAAFEALGKAWPDGAAETQAKQASSLFGVLYDPLDKGCVWNVKLAILEACVRVVDKSVPAVIAAPSLLDPLVAAVTKSFDDAKYASLRTAALKVISSLVTKLAAPNRSLPSALASLRPRISVLRNDTEPAVKELAASIFGRLV* # ORIGINAL: g2067.t1 original gene structure, not modified by PASA NODE_2183_length_7375_cov_40.381_potentialcontaminant AUGUSTUS gene 5734 7375 . - . ID=g2067;Name=g2067.t1 NODE_2183_length_7375_cov_40.381_potentialcontaminant AUGUSTUS mRNA 5734 7375 . - . ID=g2067.t1;Parent=g2067;Name=g2067.t1 NODE_2183_length_7375_cov_40.381_potentialcontaminant AUGUSTUS exon 5734 7375 . - . ID=g2067.t1.exon1;Parent=g2067.t1 NODE_2183_length_7375_cov_40.381_potentialcontaminant AUGUSTUS CDS 5734 7375 . - 1 ID=cds.g2067.t1;Parent=g2067.t1 #PROT g2067.t1 g2067 EMIYIRFAAKYNAVTRPFYIFSSDSAADFGSSHNSATDSLVQILWEAMAIVPSGLYMGDVVTAATEITSLMTTAFAQAGSPATNAYLMLLSIDSTITWPLFDHAPESNGGGNQTVTIMLNDDALLSYRLDAALVSGLQDEVADIMAVRNLMSMPSNILAAVDALQEAVQSGVAFAFQNGAAFVNAAAVWPAAPSIAAQLSDASTTIAGQDKYVSVLQVNSARNAIDLLISLRCLYQYRSKVTEYNSTSDHPRPAVQMIGRLIQACGRGSLIVGDAPDGTANTISLAMVDQICASLAALQAVFDAETASLRDETTIPVKNLTIDASLAGTCVEAKASLLAITSAVGITGVLPASINDMLLPMARAGIATVLGAFNAMYESYAVYLTEYGLAAHVSPEPTLFDKAMASRGRLMKLMTEPSLVALSPIGLVSRVTATSYRFSSFFDNLDYIIDDANVLVGQANAMLQDVNPASVQFFKTADKLLTQLTLLKTVLPHVTAKVNCILAAKAQTELALKNSTAALAAVIKNASSFHSHYTGLLSAVEPRWKP* # ORIGINAL: g5600.t1 original gene structure, not modified by PASA NODE_3208_length_4011_cov_38.5681 AUGUSTUS gene 149 3592 . - . ID=g5600;Name=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS mRNA 149 3592 . - . ID=g5600.t1;Parent=g5600;Name=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 3485 3592 . - . ID=g5600.t1.exon1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 3485 3592 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 3058 3178 . - . ID=g5600.t1.exon2;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 3058 3178 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 2738 2907 . - . ID=g5600.t1.exon3;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 2738 2907 . - 2 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 2158 2490 . - . ID=g5600.t1.exon4;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 2158 2490 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 1781 1855 . - . ID=g5600.t1.exon5;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 1781 1855 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 1466 1561 . - . ID=g5600.t1.exon6;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 1466 1561 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 1244 1322 . - . ID=g5600.t1.exon7;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 1244 1322 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 952 1019 . - . ID=g5600.t1.exon8;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 952 1019 . - 2 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 587 741 . - . ID=g5600.t1.exon9;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 587 741 . - 0 ID=cds.g5600.t1;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS exon 149 350 . - . ID=g5600.t1.exon10;Parent=g5600.t1 NODE_3208_length_4011_cov_38.5681 AUGUSTUS CDS 149 350 . - 1 ID=cds.g5600.t1;Parent=g5600.t1 #PROT g5600.t1 g5600 MAFWVSYSSPVLWILMYFIDVILWMDILIKFRMVFEVRDHRTHSRVKISDSTEIAVLYLRRDFLYDVISVFPFEFIAAILGNLHLVPYFRLNRHMRFRDVLRFFEGQENNLELDTGMIRTKKFLMIIGVTVHSVACMFFLLACRVNIHKDRVECTRGNWVEFFEIEQLPVFDEYIASLYWTVTTMCSVGYGDLVPKNTGERIYSIAIMFLGTFLSSLILGNIASSVAHKDTKRRDFRHHLICLQEYMDANDIPRRLQARVIDYYNFKWQNHGGMELNTYQELPLAFRKEVALEISRAVLEKVPLFENCDDDFLMALALVMKPFTAFPGDFIVKKGEVATEMYFINRGKAEVLSDDGEMAIAELGTGSFFGELGILYSIPRTASLRAVEYCDMFALGRDDFERVLDQYPDVSKKVREVAEERFNWFKNQITHNITRDGIYTEEQKTALRQVFEAVDADKSGCIDREELEL # PASA_UPDATE: g2621.t1, single gene model update, valid-1, status:[pasa:asmbl_3815,status:12], valid-1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . gene 2 5444 . + . ID=g2621;Name=g2621.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . mRNA 2 5444 . + . ID=g2621.t1;Parent=g2621;Name=g2621.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . exon 2 5444 . + . ID=g2621.t1.exon1;Parent=g2621.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . CDS 2 4966 . + 0 ID=cds.g2621.t1;Parent=g2621.t1;5_prime_partial=true NODE_2225_length_7170_cov_39.7486_potentialcontaminant . three_prime_UTR 4967 5444 . + . ID=g2621.t1.utr3p1;Parent=g2621.t1 #PROT g2621.t1 g2621 SSVAGRATSTPVDDEVASSSSAVVAGDATSTPAVDEVASSSSVVAGDATSTPAAHEVASSSSAVVAGVATSTPAVDAVVSSSAVVAGDATSTPAADEVASSSSAVVAGDATSTPAVDAVVSSSAVVAGDATSTPAADEVASSSSAVVAGDATSTPAVDAVASSSSVVAGVATSTPAVNAVASSSSVVAGHATSTPAADAVASSTSVVPGDSTSTPGADAVASSSSVVAGDATSTPAADAVASSSSAVVAGVATSTPAADVVASSSSVVAGVATSTPAVDEVASSSSAVVAGDATSTPAVDAVASSSSVVAGDAASTPAADEVASSSSVVAGVATSTPAVDAVASSSSVVAGDATSTPGADAFASSSSVAGRATSTPVDDEVASSSSAVVAGAVTSTTGADGVASSSSVVAGVATSTPAADVVASSSSVVAGVATSTPAADVVASSSSVVVGVATSTPAADDVASSSSAVVAGDATSTPAADAIASSSFVVVAGHATGTPAVDAVASSSSVVAGFATSTPATDGNGGAGAVTSTPAVDEVASSSSVVAGDSTSTPAAHEVASSSSAVVAGVATSTPAANAVAPSSFVVADDATSTLGADAVASSSSAVVAGDATSTPASDAVASSSSVVAGHATSTPAAHEVASSSSVGAGIATSTPAADVVASSSSVVAGVATSTPAADVVASSSSVVAGDATSTPAVDAVASSSSAVVAGVATSTTAADEVDEVASSSSVVAGDATSTPAIDAAASSSSAVVAGAATSTPASDGNGGADAATSTSGADAVASPSSVVAGDATSAPAAVDAVASSTPAVVAGVATSTSAVDAVASSSSVIAGDATSAPAAVDAVASSTPAVVAGVAASTPAVDAVASSSSVVAGVATSTPAADGVRVSSSDVVSDVSLASGTSRTFAVSDSFVSSPVSSALPSSTALVIPTTPLAASAVTTSDIFSTSMRPEFVVAPTPTSAIDVFESASVTHEVAVTSAPAADESHPATDSTVSTEAPKFISLAPNTVIDVTTPTPSVYDRPKPTSLVSSGTPSSGAATATDVVGDETDFRTSPQLSEATSAREALPSTSTMRSHDVPLPSPTRDAGEFVPYTTQAPSASEVYVDVGDTPRHSAHPTPTDDLQALPTTTAAVSTTEVVEALVTESESATPNATVVENPVQQTGAPDSGSTTITKDVAVGVGITGGMMGAASCLIFLLVARRRRQKKKTDDDKKLKRRRSFADDNVDDSSAASATAGGESRWSADTPQMFLPSQQSMLSMFAQHQDAQAARVSARAAGVGGGSGTITRSGSVTSQDTTSDAAGSLATDKGLSSIAAPSHIHRSMSIVSVASGGSDGSRHSAASALSGESTESTLIGGVRVPKMSRRRSSAVIVPPNDQDNASLDTSANGSLSTPTRDSKASSLPPATPSSPRLGAPSTPVVSPDDVDVDMDDPVVVRPKPFIIRRKSSMDSSSLPKAPSLPEEGASPSASAPPLVARTPARRPSTPSASSPTTPALAPLPVTPAEPEPSARRSSAPTSVFVAADASPTSPSANPLESWRPSALPGRRASLLAAAAAAPPPSRGIFGRQNAKGSTLNMLSPGVPAPVTAPPPAAAATPTPSAEAQPVASYGRASKDRGSMQDLIRNARRRRSSIPSIAEDASPAVLDEAPGSSDA* # PASA_UPDATE: g2622.t1, single gene model update, valid-1, status:[pasa:asmbl_3814,status:12], valid-1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . gene 6031 7067 . - . ID=g2622;Name=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . mRNA 6031 7067 . - . ID=g2622.t1;Parent=g2622;Name=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . five_prime_UTR 7067 7067 . - . ID=g2622.t1.utr5p1;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . exon 6954 7067 . - . ID=g2622.t1.exon1;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . CDS 6954 7066 . - 0 ID=cds.g2622.t1;Parent=g2622.t1;5_prime_partial=true NODE_2225_length_7170_cov_39.7486_potentialcontaminant . exon 6425 6632 . - . ID=g2622.t1.exon2;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . CDS 6425 6632 . - 1 ID=cds.g2622.t1;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . exon 6031 6256 . - . ID=g2622.t1.exon3;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . CDS 6185 6256 . - 0 ID=cds.g2622.t1;Parent=g2622.t1 NODE_2225_length_7170_cov_39.7486_potentialcontaminant . three_prime_UTR 6031 6184 . - . ID=g2622.t1.utr3p1;Parent=g2622.t1 #PROT g2622.t1 g2622 SAGDARISHVDTRDIADASVAILTEPIELHAGRTYDITGPESLTYHEVAAKLSDAIGTKVEYVAIDDASFNTAVSGHGLPPFVVHMLVKLFQYYRTGQCAQVQGDFKIITGKDPRSVSAFFSEHKASFAS* # PASA_UPDATE: g13240.t1, single gene model update, valid-1, status:[pasa:asmbl_3005,status:12], valid-1 NODE_1915_length_8560_cov_39.6949 . gene 6050 8488 . + . ID=g13240;Name=g13240.t1 NODE_1915_length_8560_cov_39.6949 . mRNA 6050 8488 . + . ID=g13240.t1;Parent=g13240;Name=g13240.t1 NODE_1915_length_8560_cov_39.6949 . five_prime_UTR 6050 6457 . + . ID=g13240.t1.utr5p1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . exon 6050 6545 . + . ID=g13240.t1.exon1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . CDS 6458 6545 . + 0 ID=cds.g13240.t1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . exon 6854 6927 . + . ID=g13240.t1.exon2;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . CDS 6854 6927 . + 2 ID=cds.g13240.t1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . exon 7247 7745 . + . ID=g13240.t1.exon3;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . CDS 7247 7745 . + 0 ID=cds.g13240.t1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . exon 7997 8488 . + . ID=g13240.t1.exon4;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . CDS 7997 8487 . + 2 ID=cds.g13240.t1;Parent=g13240.t1 NODE_1915_length_8560_cov_39.6949 . three_prime_UTR 8488 8488 . + . ID=g13240.t1.utr3p1;Parent=g13240.t1 #PROT g13240.t1 g13240 MWGQVVGRIYYRYGLFCASHPLKVILAVQVVMFLCAAPYIEYMFTSTQEPIPTKTTAPFDSDHVSVASFAERYGNGPVVRLRHFIIAANASVSPYGAATTADESTRGGVGTAGQLTIPGSEVGVLTKDAILLSMSIVEKLRAFRATIPSDGRVGASSVGAKTKTYALDEFCFHQPGEDCVVVSPATVFGTNLARYDADADLAVMLGVDRHGLNGNARAVADAVVWGIKRHANGTAYSAGALCILVALRHMPAERLGVENEFFRQFLSTLPSDVIAAGIASTSETPMFPVDGAADLLLQDGHRLPTSRVFYEFRDEERGSADIWFLVLSYAIVFLYISFSIGKFHLVKSKFGLGFTAVVIVFCSMVMSVGICTALGVPPTLMSM* # ORIGINAL: g13238.t1 original gene structure, not modified by PASA NODE_1915_length_8560_cov_39.6949 AUGUSTUS gene 733 1194 . - . ID=g13238;Name=g13238.t1 NODE_1915_length_8560_cov_39.6949 AUGUSTUS mRNA 733 1194 . - . ID=g13238.t1;Parent=g13238;Name=g13238.t1 NODE_1915_length_8560_cov_39.6949 AUGUSTUS exon 733 1194 . - . ID=g13238.t1.exon1;Parent=g13238.t1 NODE_1915_length_8560_cov_39.6949 AUGUSTUS CDS 733 1194 . - 0 ID=cds.g13238.t1;Parent=g13238.t1 #PROT g13238.t1 g13238 MSRIVVASQQTNAGWQRLRFDTSEYDTIGGIYQSNIAAYFLPVAGWYSVRSSFYSTTATTAADSRVAIGLLILDSNGVAYPKKNAGDAPRYISGGQMSVVDTPGPMFSYVGCFAQNDAVAIMFFSTIPMAFGDTSHLSFFQMELLQATSACPA* # PASA_UPDATE: g13239.t1, single gene model update, valid-1, status:[pasa:asmbl_3002,status:3], valid-1 NODE_1915_length_8560_cov_39.6949 . gene 2184 5492 . - . ID=g13239;Name=g13239.t1 NODE_1915_length_8560_cov_39.6949 . mRNA 2184 5492 . - . ID=g13239.t1;Parent=g13239;Name=g13239.t1 NODE_1915_length_8560_cov_39.6949 . five_prime_UTR 5331 5492 . - . ID=g13239.t1.utr5p1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 5016 5492 . - . ID=g13239.t1.exon1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 5016 5330 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 4845 4898 . - . ID=g13239.t1.exon2;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 4845 4898 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 4359 4715 . - . ID=g13239.t1.exon3;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 4359 4715 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 4044 4148 . - . ID=g13239.t1.exon4;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 4044 4148 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 3472 3657 . - . ID=g13239.t1.exon5;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 3472 3657 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 3028 3144 . - . ID=g13239.t1.exon6;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 3028 3144 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 2759 2884 . - . ID=g13239.t1.exon7;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 2759 2884 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . exon 2184 2380 . - . ID=g13239.t1.exon8;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . CDS 2366 2380 . - 0 ID=cds.g13239.t1;Parent=g13239.t1 NODE_1915_length_8560_cov_39.6949 . three_prime_UTR 2184 2365 . - . ID=g13239.t1.utr3p1;Parent=g13239.t1 #PROT g13239.t1 g13239 MAGTDGNEAHAMPTPPSGAKPLTKRPTPLSKNANASSKAVGKNPFNLFDNSRKKLTNVEAQRVMSVLDETLKKAEIVAFVSKMATNVDRLASSRFLTHELIEAIKDHAKKEAKYKSHEPRVPRDEVEWAEITQQLRHSTRSVCRLFLANPTAFAEAKSIVAGGSPACEGFLETFAELKGVVYERLLTTVEEERERQSYMAMIAAREKKSTEDVEKLQADLFDAKQEGNREITKRKDTIRKLKEDIQEIKSHTAELNKRMDKESRSKEASEQKIFHEKEESLLESIAQLKAQLEATTRNNRESELSLRKRKAKIETEVENWITKYDQDMGEKQDELEDIQTIYDDEKHQLSELDQRFCELEVEYVSIVEERRIDQMKKEEAERQMAMLVKAATLIQAVWRGFKCRKELKRRKGKKGKGKGSGKKK* # ORIGINAL: g9336.t1 original gene structure, not modified by PASA NODE_2996_length_4575_cov_34.3976 AUGUSTUS gene 3420 4500 . + . ID=g9336;Name=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS mRNA 3420 4500 . + . ID=g9336.t1;Parent=g9336;Name=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 3420 3432 . + . ID=g9336.t1.exon1;Parent=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 3420 3432 . + 0 ID=cds.g9336.t1;Parent=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 3625 3747 . + . ID=g9336.t1.exon2;Parent=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 3625 3747 . + 2 ID=cds.g9336.t1;Parent=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 4206 4500 . + . ID=g9336.t1.exon3;Parent=g9336.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 4206 4500 . + 2 ID=cds.g9336.t1;Parent=g9336.t1 #PROT g9336.t1 g9336 MPLLDPFLAYRAPFVAVAFLFLWGVNVQVFLLKRIDYATALGFTKDEIMRPTDIFQSAFVLFGILFGFFAAESYLADSHPSSADIFPVVLYATLAAVVFWPGDTFFRRPRVHFSRVLRNIIIPPAGVTQFVEVLVADGFTSLT # ORIGINAL: g9335.t1 original gene structure, not modified by PASA NODE_2996_length_4575_cov_34.3976 AUGUSTUS gene 125 2042 . + . ID=g9335;Name=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS mRNA 125 2042 . + . ID=g9335.t1;Parent=g9335;Name=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 125 1321 . + . ID=g9335.t1.exon1;Parent=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 125 1321 . + 0 ID=cds.g9335.t1;Parent=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 1531 1658 . + . ID=g9335.t1.exon2;Parent=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 1531 1658 . + 0 ID=cds.g9335.t1;Parent=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS exon 1949 2042 . + . ID=g9335.t1.exon3;Parent=g9335.t1 NODE_2996_length_4575_cov_34.3976 AUGUSTUS CDS 1949 2042 . + 1 ID=cds.g9335.t1;Parent=g9335.t1 #PROT g9335.t1 g9335 PIRWPNDTSAAAAAALWDETQRAHIASAKPTDGTINARRSNLLLAGAPDGGLELLPTDPAVPLLFIQSAGYAREGLYAAASSSSSSSHNSSGSSSKKQKSSRGGGNGAGRIQGASLGTAGNNAASDTYRAHGRGEARDARDSNARDGSTHARTPAQVKEPALGFASGWDLVVPPGWAVPVWRALVFAGARAFGLRQHDALRLELGLPTFPTDWPDAQAVSGQPGAGVSGQPLNETMSELVELYATYVAKPKAKRVNYVKLKVASPFRLPWESLVCATSATTGMYVGAIAPPRAGVAGVSGLSDVEREKENAKRFFVPIVVRNSNKLDVYCSWLQASGALPSGGVSAHVIPADANALVCVRLTLLRKGVPHRFASICIASNAVEADEGAMETVSLSSTLEPPSREIIGYVTSGGYSQSRGRGIAIGFITVASLARVVDHCTTRLHHARANMALTADGDALGERQRRRKGPVTC* # PASA_UPDATE: g3843.t1, single gene model update, valid-1, status:[pasa:asmbl_6886,status:12], valid-1 NODE_4032_length_2312_cov_34.3688 . gene 186 1347 . + . ID=g3843;Name=g3843.t1 NODE_4032_length_2312_cov_34.3688 . mRNA 186 1347 . + . ID=g3843.t1;Parent=g3843;Name=g3843.t1 NODE_4032_length_2312_cov_34.3688 . five_prime_UTR 186 187 . + . ID=g3843.t1.utr5p1;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . exon 186 267 . + . ID=g3843.t1.exon1;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . CDS 188 267 . + 0 ID=cds.g3843.t1;Parent=g3843.t1;5_prime_partial=true NODE_4032_length_2312_cov_34.3688 . exon 638 725 . + . ID=g3843.t1.exon2;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . CDS 638 725 . + 1 ID=cds.g3843.t1;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . exon 1005 1347 . + . ID=g3843.t1.exon3;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . CDS 1005 1103 . + 0 ID=cds.g3843.t1;Parent=g3843.t1 NODE_4032_length_2312_cov_34.3688 . three_prime_UTR 1104 1347 . + . ID=g3843.t1.utr3p1;Parent=g3843.t1 #PROT g3843.t1 g3843 LPYVLAPIPNCIARRASRDSFSLSTSNPGLDFGNFFTSVFFVSGFAIPMVLAHAGKIAVGAMMLTLAGSLVIFATMILFNRLSHSDDW* # PASA_UPDATE: g3844.t1, single gene model update, valid-1, status:[pasa:asmbl_6885,status:12], valid-1 NODE_4032_length_2312_cov_34.3688 . gene 1849 2236 . - . ID=g3844;Name=g3844.t1 NODE_4032_length_2312_cov_34.3688 . mRNA 1849 2236 . - . ID=g3844.t1;Parent=g3844;Name=g3844.t1 NODE_4032_length_2312_cov_34.3688 . five_prime_UTR 2236 2236 . - . ID=g3844.t1.utr5p1;Parent=g3844.t1 NODE_4032_length_2312_cov_34.3688 . exon 1849 2236 . - . ID=g3844.t1.exon1;Parent=g3844.t1 NODE_4032_length_2312_cov_34.3688 . CDS 1900 2235 . - 0 ID=cds.g3844.t1;Parent=g3844.t1;5_prime_partial=true NODE_4032_length_2312_cov_34.3688 . three_prime_UTR 1849 1899 . - . ID=g3844.t1.utr3p1;Parent=g3844.t1 #PROT g3844.t1 g3844 YKAGARQFPTLVPITPDDPASAPNRRAWEVLQKWEKPFLTAFSDQDPITRGGDKFMRAVIPGCAGQKHVTIANGGHFLQEDCGEELARVVVSFIRSTWGHADMPRMPSSKM* # ORIGINAL: g2356.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 9645 12641 . + . ID=g2356;Name=g2356.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 9645 12641 . + . ID=g2356.t1;Parent=g2356;Name=g2356.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 9645 12170 . + . ID=g2356.t1.exon1;Parent=g2356.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 9645 12170 . + 0 ID=cds.g2356.t1;Parent=g2356.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 12261 12641 . + . ID=g2356.t1.exon2;Parent=g2356.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 12261 12641 . + 0 ID=cds.g2356.t1;Parent=g2356.t1 #PROT g2356.t1 g2356 MATTAANNDARLAHELVQRLNSESRVQGGIVGAWLRQKGYRGNVSAFISAYAHLFEHRIDNYVYLQMAARPAAVVAPVRSQSVLNEEGVVRRVVTALEGGPVRLTNFPNYVSSGDMGYIRNTHISLKRFLTRYNTLFQIGGTPGAGNETCSLTPEGVRRYLTISGQQGTSSEPASAPQTLANAHAPQSAAGPSTSASTSTAHATMKSEERPSGSEASVASPAASVTPSATPLRTALAAHSSRTPFLQLDPSSEPVPVHLVDTRDAFVAAKARLEASEALAIDCEMDGSENKACLALVQVYVSTSSFPRPCIYVFDVFSEIGHESVVAVWRAVCNDRVKKVFHDGRRDIDAIRYTVAQYGATSANIGDVQGIVDVQVLHGLVLHFRGNAGKRRAGFSEVMEFVGLPGNPFKAEMRVRFERKEQTLWTRRPIESDLLSYAAWDVLPLLAASERLEKAVAEAAVGLAHRSSAFAAEEFRQATYKTRGGFEVRLNNDYVIVRFNEYRNAFEYVSVDDGGIFEDVALAELGVVNDLTDEQESERETELMLAVLPEHVRRLIESTQNDMSRVNGEAVSVCEIRIDEGKPVSVLFNDTAETQHTFDTAYCSVAAIVKSLRDMCARKNNFNGDDDGDYDDYNDDENEVDGRPRRSVAFGRDNRVGIEGTLHRISAIRDKARNIVGLTMRIGNGIRGAAYILRDVVSSILPSVEGLDPQSLLLVGRPGVGKTTYLRDIARRLADDHGVAQRVVVVDKSGEIGGEGRVAHGALGKARRMHVADQLSHVLIEAVQNHNPRVLVVDEIGEASHVRAVTTIAQRGTALVGTAHGTSLVSLLRNPDLRVLVGDVTTTTVGDAMAKELSRDRGDAMRKTKTERKGAPVFSRLVEVRRRKHVVIHWSVAGTVDALLSGECNNKGVVEERWYDPECRLWKARFSIVTREGALGELGGVIGSGGDGGDSWVSRLLGETLSPRPVKN* # ORIGINAL: g2357.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 14115 15497 . + . ID=g2357;Name=g2357.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 14115 15497 . + . ID=g2357.t1;Parent=g2357;Name=g2357.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 14115 15497 . + . ID=g2357.t1.exon1;Parent=g2357.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 14115 15497 . + 0 ID=cds.g2357.t1;Parent=g2357.t1 #PROT g2357.t1 g2357 MPSDRTATLCITGLSHLRNCVDTNPFHESLDELSGMTNDFGRPVFSPPIPQLPESLDAFEIMEDFLTKFCKRSLRRAPYSPGVFIKFMFQWASNVSCFDLEQVPAEKKILEDCGLLQRHGPIGVAPVWYLDDDTDDLLDEPLVNRWLERVARSLPPGSGLARFLCKNGMTIRLWEQAGEVMPDRLACAVLCALYSVGLSTAIESRSAAIGSLEFCYAVDVAAARWVQTQGEDACRAVVKAIIDELLEPGMGPFVVLPGATEGHGFYVTLILRRESTHVFVRAAVCDGNDDDSEDRLDTERGDGYRYARLWWLTECCIASEDERELLNNFLFQLLHLRLYLRGRSVKMWLSMFEGQRDTESDYANNYLIMLQGPIGNCAVHNLRQALLVGLGFAHRDMLFGETQKIHGFLFGARIALECHREVMNGGTFDIVVQWPLSAAQCVTCGAHGGLRWCGRCGTVR* # ORIGINAL: g2353.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 4076 4804 . + . ID=g2353;Name=g2353.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 4076 4804 . + . ID=g2353.t1;Parent=g2353;Name=g2353.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 4076 4804 . + . ID=g2353.t1.exon1;Parent=g2353.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 4076 4804 . + 0 ID=cds.g2353.t1;Parent=g2353.t1 #PROT g2353.t1 g2353 MSLSRQEAVDLSTDVFVALGVYLDQLDPFLASGDFDADCYVQHNVWVGFAQIMWIRLCRFPFLRNHNDDAAQRTAIMYGAAERDDVLFCRLHPPHQKRPDNHAFASILSLELIAFLDKIRSFLSVHSDGEGFLRHNVWIGSEKKRMSVVDDKPTDDNPTDDDYWVWIRLCEFPDYRTPHSCPVDDDANCGDSLNAHNALENDDAGHQDVALSENVALAENVAIGHDNVLGTTTRSVTGKTSR* # ORIGINAL: g2355.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 8102 8962 . + . ID=g2355;Name=g2355.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 8102 8962 . + . ID=g2355.t1;Parent=g2355;Name=g2355.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 8102 8962 . + . ID=g2355.t1.exon1;Parent=g2355.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 8102 8962 . + 0 ID=cds.g2355.t1;Parent=g2355.t1 #PROT g2355.t1 g2355 MESPGNITQTEDAAQRTVENNTNFESQDVMNKNSTDKSVASLVEPTEGIDSTDQIAHKRKFDLVVARNDDMAHNGSKRHRLETSDETKLAGGVQREKRIEAATIADKFDAYYKRLCEQLRRSAERPVAQAVYAEMIANDKRVSPLMAKQFLDVIRAGSAVQAEKREEIKWAFQLGHAIRDIELARQQEKARLENSSGPRDERVWKTSQMTREVFFDTYLKSSLSLSFSTAEKHCRFYDCCLEYPRALLLYCSYEKLLDNVPAIRQRLARQPQDLRLWQAKLAPAQA* # ORIGINAL: g2354.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 4829 5260 . + . ID=g2354;Name=g2354.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 4829 5260 . + . ID=g2354.t1;Parent=g2354;Name=g2354.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 4829 5260 . + . ID=g2354.t1.exon1;Parent=g2354.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 4829 5260 . + 0 ID=cds.g2354.t1;Parent=g2354.t1 #PROT g2354.t1 g2354 MRLGNVTRLGNVALGQRDAPAPGQRDAMVQDDVLMQDDVLGHDHNAVGHGQNSAHERQAHCHDDGRDDSIMDAVQESTSDCSRDSKSERLYRELCRLRDAFCGFRHICSVITRLKFVAFNLSFAHRQRDSGRANRLCASALIA* # ORIGINAL: g2352.t1 original gene structure, not modified by PASA NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS gene 577 2838 . + . ID=g2352;Name=g2352.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS mRNA 577 2838 . + . ID=g2352.t1;Parent=g2352;Name=g2352.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 577 1808 . + . ID=g2352.t1.exon1;Parent=g2352.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 577 1808 . + 0 ID=cds.g2352.t1;Parent=g2352.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS exon 2349 2838 . + . ID=g2352.t1.exon2;Parent=g2352.t1 NODE_711_length_18752_cov_35.5871_potentialcontaminant AUGUSTUS CDS 2349 2838 . + 1 ID=cds.g2352.t1;Parent=g2352.t1 #PROT g2352.t1 g2352 MTTTVEKSGDLLSNSMLCMRLPHVEVVRNDDLRSDGPDGPAANAHTLDWLLHPAVVATAYWFPRTSVDKIREIKPYLTQSAPIPKHMSQCELLEALCNEFWGFETTLVLDKVHAALEASHAEPTLPDHLVEPLFFASFYTIKENEKALLSVASAEDARALAMAIFYKQGYAPARQLFETVQGFDAEPGFDDEPGFDAELGFDAEQGFDDEHGFDAEQGVEFEHTEHGFAPVRPVVESDCSVDFMLNFRVNGFLDKGKSTKRCKSGNLPRWSGVPFRGKKVSYGRLVLQNGSKLGRVTLFNRPLESFDDYMRAILSRPLPEFDAFVESYVKSVKELINPSQTVKEMIAMVMKQFNRSQFNRSQEELPVGRGGTRCAFLEAYNVTETPGEIATAHVLSPSFIDSLPSPPESPRYVFLDMAERLDIVRFGRNQLIEEVQKQTEEFHCGGTYRCELIGFGNCKEIVWKLSHPDALSSARLIFDGNERFAARDAAYFALSQPYAYHSNIPGDSTFVYSFALEPENAVQPTGNENLRGTVSLELNFNKKHRGERMELTVYGVSYSQLSVPPLATGVCCR* # ORIGINAL: g12902.t1 original gene structure, not modified by PASA NODE_3351_length_3669_cov_42.5 AUGUSTUS gene 778 2196 . - . ID=g12902;Name=g12902.t1 NODE_3351_length_3669_cov_42.5 AUGUSTUS mRNA 778 2196 . - . ID=g12902.t1;Parent=g12902;Name=g12902.t1 NODE_3351_length_3669_cov_42.5 AUGUSTUS exon 778 2196 . - . ID=g12902.t1.exon1;Parent=g12902.t1 NODE_3351_length_3669_cov_42.5 AUGUSTUS CDS 778 2196 . - 0 ID=cds.g12902.t1;Parent=g12902.t1 #PROT g12902.t1 g12902 MVCDGDGGARWATFSDIPMEIIVVHLAPFLDQPDLASLCNASSALRVNLRPLRLFVLRRKCAEKYHVDPVMRDAVHAVIPRTRLVINLDGYTPRPEARTLAHHPTAHLLEIDDSRAADSVDEGDGGEPADVCSLAGDSATDFSGVADVHTLILRRCLGMWDVFPLRRVHSLDLSWCPQVHDVSALSGVHTLDLTGCKGVVDVSSLGGVHTLILCQCDGVRDVSALGGVHTLKLSWCQNIVDVSHLGRVHTLGLDNCYAVSSVSTLGRVHTLSLSGCPVTDVSSLGTVHTLCLSCVGVRDVSSLGTVHTLNLEACPNILDFSSLGLVHCLDLGDCVGVIDVTALGHVHTLNLRYCHSLVDVSALGTVHSLDLTSCLHVVDVSALGRVHTLTLSNCVGVRDVSALGTVHTLDLSACVNIRDVSALGGVHTLVLDGCYRVVGMSALHRVHRLQANGCGLPANSDSDSECTDTDPE* # PASA_UPDATE: g12901.t1, single gene model update, valid-1, status:[pasa:asmbl_5913,status:12], valid-1 NODE_3351_length_3669_cov_42.5 . gene 82 281 . + . ID=g12901;Name=g12901.t1 NODE_3351_length_3669_cov_42.5 . mRNA 82 281 . + . ID=g12901.t1;Parent=g12901;Name=g12901.t1 NODE_3351_length_3669_cov_42.5 . five_prime_UTR 82 82 . + . ID=g12901.t1.utr5p1;Parent=g12901.t1 NODE_3351_length_3669_cov_42.5 . exon 82 281 . + . ID=g12901.t1.exon1;Parent=g12901.t1 NODE_3351_length_3669_cov_42.5 . CDS 83 211 . + 0 ID=cds.g12901.t1;Parent=g12901.t1;5_prime_partial=true NODE_3351_length_3669_cov_42.5 . three_prime_UTR 212 281 . + . ID=g12901.t1.utr3p1;Parent=g12901.t1 #PROT g12901.t1 g12901 PNGVEEFIPLGTLTPYEDSKVKAMIPELKANIEKGLAFAKKL* # ORIGINAL: g2969.t1 original gene structure, not modified by PASA NODE_8225_length_381_cov_40.3987_potentialcontaminant AUGUSTUS gene 183 381 . + . ID=g2969;Name=g2969.t1 NODE_8225_length_381_cov_40.3987_potentialcontaminant AUGUSTUS mRNA 183 381 . + . ID=g2969.t1;Parent=g2969;Name=g2969.t1 NODE_8225_length_381_cov_40.3987_potentialcontaminant AUGUSTUS exon 183 381 . + . ID=g2969.t1.exon1;Parent=g2969.t1 NODE_8225_length_381_cov_40.3987_potentialcontaminant AUGUSTUS CDS 183 381 . + 1 ID=cds.g2969.t1;Parent=g2969.t1 #PROT g2969.t1 g2969 AAVCGWRCDALDESSPDRLWGTGLAGARERLPAADRLPVIGVVLAIGVCRCRWSWRRRCCAACWAR # ORIGINAL: g9030.t1 original gene structure, not modified by PASA NODE_2013_length_8100_cov_41.6398 AUGUSTUS gene 188 2218 . + . ID=g9030;Name=g9030.t1 NODE_2013_length_8100_cov_41.6398 AUGUSTUS mRNA 188 2218 . + . ID=g9030.t1;Parent=g9030;Name=g9030.t1 NODE_2013_length_8100_cov_41.6398 AUGUSTUS exon 188 2218 . + . ID=g9030.t1.exon1;Parent=g9030.t1 NODE_2013_length_8100_cov_41.6398 AUGUSTUS CDS 188 2218 . + 0 ID=cds.g9030.t1;Parent=g9030.t1 #PROT g9030.t1 g9030 MGRVTSKRRGCRALRQQSEGSFRSSSSSARTAAIIFALSFVTTCLLTSYANADSSFGKTAYTGLGGLDHVRNGRDTESALDAEALSADAPCPTCTCAGRRRPVLSEDSNNTGEISANDKEILMRGKISLILTVGFATLGCSLLPWYITRLKKSLQIMRVACCFASGIILGAAFSHMLPDSEDAWDLYFELAGTSGLLRPDDSEYPFAQLISVFVLLCLIAVDKLLIARGMEGGTHGHGHGHGHSQANTHGHSHVIPTLPEDYSDEELAADGDASKSTDAMRGHYGTVDRHVHADGTLYDGNDGDCGGAADEVDGGVNNYQSGRTGHAEERTHSHTHAHGQVRAHMHNTPHTHDADEDAAADEVAVTVVTVPDETQPLIPRRPVEDDRVSRTSRVSRTSRVSRRSVRCYGDGGIHYHWGDGTSRVLSVGNVDCGDGGYGGTLRRQSVSETCIPCEVNGPCDAMAPCGNSNAFSSIAAATSVSAAMAHQDSVNAAYADDAAVRTPDATTIFSRDVLSTSPSVVTTGSPAQVAQAWIFFVALSLHSIFDGLGLGAENNVQGFYALLIAVCAHKLLDGFALGVPVYFARFSRMQTAFSLIFCSAMTPLGIGIGWAATSSYHGANAQLAKAIIVSMSTGSFYFISLIELLPGGLADGELMGVKIAAVFAGWGIMAMIAIWV* # PASA_UPDATE: g9031.t1, single gene model update, valid-1, status:[pasa:asmbl_3277,status:12], valid-1 NODE_2013_length_8100_cov_41.6398 . gene 6293 7861 . - . ID=g9031;Name=g9031.t1 NODE_2013_length_8100_cov_41.6398 . mRNA 6293 7861 . - . ID=g9031.t1;Parent=g9031;Name=g9031.t1 NODE_2013_length_8100_cov_41.6398 . exon 6293 7861 . - . ID=g9031.t1.exon1;Parent=g9031.t1 NODE_2013_length_8100_cov_41.6398 . CDS 6494 7861 . - 0 ID=cds.g9031.t1;Parent=g9031.t1 NODE_2013_length_8100_cov_41.6398 . three_prime_UTR 6293 6493 . - . ID=g9031.t1.utr3p1;Parent=g9031.t1 #PROT g9031.t1 g9031 MQASDVWSFGVTLFEMFSFGQLPYAGMTNMAAMAHVRAGGRLSRPDACDPHFFDMIMWPCWATDPGERPAFDSFESLLGDVFDMRQASAIDALTIVMDANEGRDPDALNASLASSAAAGVGQGASRPPALIPSPGAGLAVHTRGIAQARGNIVPSAQQQRGVSTRSPAATPALERLRRMGNSLRSSLTGGYLMVRGRSSRRRESAYDNSSFEMQKDSDWQPSSDRAPAHTNLYSGESEGISPPGSASRAHLSSARSVDEISVSISSGHSLGLGKSKSLALGSSRGVSARMGVVREEVRPVAGCPSASFNLRHGASQSQPPTPCNNRNRPETTVPQSTEIDQADQYQLPLDVAREFESAPSMRINENADIRIGSAYAGGRASLPASSQSREGFEGTVSAPYALTAQFTSASSASSAMAADRFAAHRQTVRKPTVRLTLRDDDGDSDASMHPRETIV* # ORIGINAL: g3300.t1 original gene structure, not modified by PASA NODE_2723_length_5325_cov_42.7055 AUGUSTUS gene 501 2520 . - . ID=g3300;Name=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS mRNA 501 2520 . - . ID=g3300.t1;Parent=g3300;Name=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 2430 2520 . - . ID=g3300.t1.exon1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 2430 2520 . - 0 ID=cds.g3300.t1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 2229 2298 . - . ID=g3300.t1.exon2;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 2229 2298 . - 2 ID=cds.g3300.t1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 1913 2018 . - . ID=g3300.t1.exon3;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 1913 2018 . - 1 ID=cds.g3300.t1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 1502 1600 . - . ID=g3300.t1.exon4;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 1502 1600 . - 0 ID=cds.g3300.t1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 1071 1175 . - . ID=g3300.t1.exon5;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 1071 1175 . - 0 ID=cds.g3300.t1;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 501 740 . - . ID=g3300.t1.exon6;Parent=g3300.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 501 740 . - 0 ID=cds.g3300.t1;Parent=g3300.t1 #PROT g3300.t1 g3300 MKRELTQLASDLPQGLCCWQKDDRIDILEASIQGPQGTPYEGGVFRVDFDIPERYPFEAPKARFVTPIYHPNVDESGRICHDILKMPPKGAWNPSHNVASVLTSLQLLLIEANPDDGLMADIASQYKFNRVAFNENARAYTRKHAMAMTVDSASVRTPLGESTGAGSNVIGTVGECVTALKYAEDNSNGRKQNGAYKRLSEDDDACTADATRDEREMKRRRESVENDDGCCAHNTP* # ORIGINAL: g3301.t1 original gene structure, not modified by PASA NODE_2723_length_5325_cov_42.7055 AUGUSTUS gene 3307 4509 . + . ID=g3301;Name=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS mRNA 3307 4509 . + . ID=g3301.t1;Parent=g3301;Name=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 3307 3443 . + . ID=g3301.t1.exon1;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 3307 3443 . + 0 ID=cds.g3301.t1;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 3649 3757 . + . ID=g3301.t1.exon2;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 3649 3757 . + 1 ID=cds.g3301.t1;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 3958 4092 . + . ID=g3301.t1.exon3;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 3958 4092 . + 0 ID=cds.g3301.t1;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS exon 4444 4509 . + . ID=g3301.t1.exon4;Parent=g3301.t1 NODE_2723_length_5325_cov_42.7055 AUGUSTUS CDS 4444 4509 . + 0 ID=cds.g3301.t1;Parent=g3301.t1 #PROT g3301.t1 g3301 MPAALGSSPDDAMSVVDYLDLGYEFYASFFTTIVILSVPLLVYDYWYNHVVKEDDEGEVHHDDPAGSSTALTHAGHEKKPAKASVGCKIVPNPMLLLRGAEYGRFTTANNKLALTPYDMSLTAKDQQAMFCYESDYGGDQALESAHNG* # ORIGINAL: g5866.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 25847 28064 . + . ID=g5866;Name=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 25847 28064 . + . ID=g5866.t1;Parent=g5866;Name=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 25847 25882 . + . ID=g5866.t1.exon1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 25847 25882 . + 0 ID=cds.g5866.t1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 26060 26112 . + . ID=g5866.t1.exon2;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 26060 26112 . + 0 ID=cds.g5866.t1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 26353 26554 . + . ID=g5866.t1.exon3;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 26353 26554 . + 1 ID=cds.g5866.t1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 27085 27246 . + . ID=g5866.t1.exon4;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 27085 27246 . + 0 ID=cds.g5866.t1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 27418 27576 . + . ID=g5866.t1.exon5;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 27418 27576 . + 0 ID=cds.g5866.t1;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 27687 28064 . + . ID=g5866.t1.exon6;Parent=g5866.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 27687 28064 . + 0 ID=cds.g5866.t1;Parent=g5866.t1 #PROT g5866.t1 g5866 MLGFEFTSGQLAVLGVFGAVFSSLNVWSSVPLIRSREKANESQDELWVPYYLSYLSVLLWFAYGAFIQDYALIGGNAVSLCASTYYMDTLYTLAKKKSFMKFTKVLGNGWILFTALWVSFYDGSYDKKSDQFGLLCSILVIATYVAPIVNNVKTIRTRNARSSPFLPGVAMTVMGAIWTLYGLGADNVFIALTSATALVFGAFQVTLFLIFSTRAELRQIPKDFVAGVVGFGRNIRTVFLFVFTCKCVNTLREIQETRRASLAARRSLMGLNKVGTTPDGVTHDDSAAPAPGIIAVQPSALSSPALEPSAPAGVTDEDLEFMELPGSVA* # PASA_UPDATE: g5865.t1, single gene model update, valid-1, status:[pasa:asmbl_10086,status:3], valid-1 NODE_94_length_41103_cov_42.2485 . gene 21536 25178 . - . ID=g5865;Name=g5865.t1 NODE_94_length_41103_cov_42.2485 . mRNA 21536 25178 . - . ID=g5865.t1;Parent=g5865;Name=g5865.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 24925 25178 . - . ID=g5865.t1.utr5p1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 24802 25178 . - . ID=g5865.t1.exon1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 24802 24924 . - 0 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 24399 24523 . - . ID=g5865.t1.exon2;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 24399 24523 . - 0 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 24098 24209 . - . ID=g5865.t1.exon3;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 24098 24209 . - 1 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 23775 23944 . - . ID=g5865.t1.exon4;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 23775 23944 . - 0 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 23475 23597 . - . ID=g5865.t1.exon5;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 23475 23597 . - 1 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 22990 23155 . - . ID=g5865.t1.exon6;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 22990 23155 . - 1 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 22501 22720 . - . ID=g5865.t1.exon7;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 22501 22720 . - 0 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . exon 21536 22264 . - . ID=g5865.t1.exon8;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . CDS 21765 22264 . - 2 ID=cds.g5865.t1;Parent=g5865.t1 NODE_94_length_41103_cov_42.2485 . three_prime_UTR 21536 21764 . - . ID=g5865.t1.utr3p1;Parent=g5865.t1 #PROT g5865.t1 g5865 MGVVVEGRTSAAVAVVRPSPNEIERAVAEERRRQRVQRLIEVRERSKAFETMMTRQYRQTSKAVDTTAVCAARKQWQTAHEERIRRLVERLDTAQSIVGEANEMAAKVVAESQSEEETLEAHMRLLHKAQERYKAAVDDLAEKEMNARSLEEHKAELRESTARRERERARLVAARQRVRESVLAEAERQSRAADKTRDRDIPPPAHYNAFDERGLWQRRRNNQDVPMGLVHIEGSSDTRAKKAMADAEREIARVRALQAANEAERIAEDIRRQDRGHAAFARERMEAEARAVVSEMEKLARIERRLRQDEALATEGGSAALAGTAARRRFEAQIEREFERQFVYLREPQQPSVSVGASTRQPSSRRDPPAVFATADADENSRRAEADDPVPESGVGRWASESGDTATGYRQGSHLGGDGRQGADGGNLGSPSKPRTVSVHWRPDSRLAIVHSPTHNTSGGERDDDLILSGLPRGFDPTTRRDELQPMSPAERLDRKLAEILGFENVPWHSHQ* # PASA_UPDATE: g5858.t1, single gene model update, valid-1, status:[pasa:asmbl_10090,status:12], valid-1 NODE_94_length_41103_cov_42.2485 . gene 2231 3778 . + . ID=g5858;Name=g5858.t1 NODE_94_length_41103_cov_42.2485 . mRNA 2231 3778 . + . ID=g5858.t1;Parent=g5858;Name=g5858.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 2231 2278 . + . ID=g5858.t1.utr5p1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 2231 2344 . + . ID=g5858.t1.exon1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 2279 2344 . + 0 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 2451 2481 . + . ID=g5858.t1.exon2;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 2451 2481 . + 0 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 2604 2726 . + . ID=g5858.t1.exon3;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 2604 2726 . + 2 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 2978 3040 . + . ID=g5858.t1.exon4;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 2978 3040 . + 2 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 3163 3238 . + . ID=g5858.t1.exon5;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 3163 3238 . + 2 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . exon 3477 3778 . + . ID=g5858.t1.exon6;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . CDS 3477 3612 . + 1 ID=cds.g5858.t1;Parent=g5858.t1 NODE_94_length_41103_cov_42.2485 . three_prime_UTR 3613 3778 . + . ID=g5858.t1.utr3p1;Parent=g5858.t1 #PROT g5858.t1 g5858 MATKVFFDVAIDNKPAGRIIMELRTDVVPKTCENFRALCTGEKGFGFKGSSFHRVIPNFMLQGGDFTRHNGTGGKSIYGEKFADENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTAWLDGKHVVFGIVTPDSLEIVKAIEKVGSDSGKTSRPVTITDCGQL* # ORIGINAL: g5859.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 3926 6298 . - . ID=g5859;Name=g5859.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 3926 6298 . - . ID=g5859.t1;Parent=g5859;Name=g5859.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 3926 6298 . - . ID=g5859.t1.exon1;Parent=g5859.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 3926 6298 . - 0 ID=cds.g5859.t1;Parent=g5859.t1 #PROT g5859.t1 g5859 MDEVGRRRASCAAMPSIGDAQCVPHTHTRMPRQIPRECPHCRIRLSSVRLNLAEVAFLCKTCPYPLESDDISAFVCTSEPEFAEAASHSSSVGPSCESSALGLPSKRPSAAHAPYAPSSHATKRRRLSSQSEPPAHQPPRQPPLLYLTPTIPPSPAPARAAPSAACSMGQSANGMRATARRHPPGHSVHVPRLPHEERQRLVRLAMESPVDVRSGRVHWTANTRGAEGFSWLHALLCVVTHLRTVRSACTQLPAVGASTLSTAMPSAPSVDQGLGLGLGLGLASATGGEWLMSGIVRSFECAQRIYRRADTDEATALHLALGPLSMARTAALEALRDRVQLQLPSASAHDLAPAVRQLMGATSACGVRQTRDACSGAAAVGPGDANVGLCGEGGRARDTHALHKNLTCDPLVDFTCDGCGALSEARPRRQHVISLPHAPADFSIARPSFVSRCRVCGGLCQRASIVFERVGDCIIAAFPTGVAEERTAPTTTGGIKPHIASCTEERCPVDRNSTATSVERLLDDAVIGGRVFRAVAVVHVGSKGGLVALLRVDGDTSGNGCGCAVSAPVTPSMARLPIDGAVLAMPEPSWIECDDRRSVARDAGGAFPRNVTPRSVRLVAWEALQLAEADSPVPHGPCVQTDAITGSADAQARLFGSRGASISSPFGGDDASDLLPMEFTRTPSPPPIGGWEDVTCALAEDVLSEFGLSPSPVPDNRRSMSHNGSDFDAHERLVEDVFSEFGLSPSPVPDHFSSGANTPQTHVGRDMSELSVLDELDQIQFAAPSPTANQ* # ORIGINAL: g5867.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 28772 31082 . - . ID=g5867;Name=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 28772 31082 . - . ID=g5867.t1;Parent=g5867;Name=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 30747 31082 . - . ID=g5867.t1.exon1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 30747 31082 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 30284 30409 . - . ID=g5867.t1.exon2;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 30284 30409 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 29922 30107 . - . ID=g5867.t1.exon3;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 29922 30107 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 29527 29678 . - . ID=g5867.t1.exon4;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 29527 29678 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 29329 29380 . - . ID=g5867.t1.exon5;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 29329 29380 . - 1 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 28994 29098 . - . ID=g5867.t1.exon6;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 28994 29098 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 28772 28897 . - . ID=g5867.t1.exon7;Parent=g5867.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 28772 28897 . - 0 ID=cds.g5867.t1;Parent=g5867.t1 #PROT g5867.t1 g5867 MAPLRVCFFGAGRIGLYVGCTLAGLDDVHVSFVGRQRLYDTILENGGVELSTLTRPGEITKVPVSKFTYTTSISEALSKLNGEAFDVIVVTVKSGATTEAAEELKVAHVTTQIVSLQNAVENLDALKSVLKHHTVVESMVPYNVAQLPVVRFHQGVTGPLFFDDRTDPRFLSALSRAKLDYKAVPESEMRAVLHGKLVINLNNSLNALSGLTLKQQFLDWNYRWIWATMQQELLAVYTAHGIQSRPFVPLPMWVVPLVLKTPTFIYRTLSASMLALDENARSSMWDDLEAGRKTEIDHLNGHAMRLADEVHLKVLFWLIVPVISEVYKRVKELEDGQRKSPGIPGDVLLRELKEKCAGAI* # PASA_UPDATE: g5869.t1, single gene model update, valid-1, status:[pasa:asmbl_10087,status:3], valid-1 NODE_94_length_41103_cov_42.2485 . gene 34683 37903 . - . ID=g5869;Name=g5869.t1 NODE_94_length_41103_cov_42.2485 . mRNA 34683 37903 . - . ID=g5869.t1;Parent=g5869;Name=g5869.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 37877 37903 . - . ID=g5869.t1.utr5p1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 37734 37903 . - . ID=g5869.t1.exon1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 37734 37876 . - 0 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 37561 37590 . - . ID=g5869.t1.exon2;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 37561 37590 . - 1 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 37297 37376 . - . ID=g5869.t1.exon3;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 37297 37376 . - 1 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 37070 37149 . - . ID=g5869.t1.exon4;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 37070 37149 . - 2 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 36693 36804 . - . ID=g5869.t1.exon5;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 36693 36804 . - 0 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 36082 36179 . - . ID=g5869.t1.exon6;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 36082 36179 . - 2 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 35566 35652 . - . ID=g5869.t1.exon7;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 35566 35652 . - 0 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . exon 34683 35274 . - . ID=g5869.t1.exon8;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . CDS 35263 35274 . - 0 ID=cds.g5869.t1;Parent=g5869.t1 NODE_94_length_41103_cov_42.2485 . three_prime_UTR 34683 35262 . - . ID=g5869.t1.utr3p1;Parent=g5869.t1 #PROT g5869.t1 g5869 MRLRLNKATAEEIICEPYQTMSSKKGKDKDKVAVKVIILGDSAVGKSKLVERFLMDNYQPQQLSTFALTLFRYDCEIDDKDVAVDLWDTAGQERFNSMHPSYYHQAHACLLAFDVTRKQTYKSLDTWYKELREYRPEIPCIVLANKIDVDYKVTQKSFNFAKKNGLPFYFVSASDGTNVEEVFNTIIRAAVHYKENSDDFVDQVMDLISEDRD* # ORIGINAL: g5861.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 9370 10595 . + . ID=g5861;Name=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 9370 10595 . + . ID=g5861.t1;Parent=g5861;Name=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 9370 9438 . + . ID=g5861.t1.exon1;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 9370 9438 . + 0 ID=cds.g5861.t1;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 9569 9673 . + . ID=g5861.t1.exon2;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 9569 9673 . + 0 ID=cds.g5861.t1;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 9811 9993 . + . ID=g5861.t1.exon3;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 9811 9993 . + 0 ID=cds.g5861.t1;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 10097 10186 . + . ID=g5861.t1.exon4;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 10097 10186 . + 0 ID=cds.g5861.t1;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 10410 10595 . + . ID=g5861.t1.exon5;Parent=g5861.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 10410 10595 . + 0 ID=cds.g5861.t1;Parent=g5861.t1 #PROT g5861.t1 g5861 MATTPSTRERIDKMIDQFSYCMLITENDDGELRARPMAVADHEQGGDLYFFTIVGTSKVDEIQQHCRSAITMQSSNAFLSLSGNACVIRNKEQTSKRWSPKFKPWFPDGVDTKDLALLKFTATAGEIWDQSKPLSAVRYLWEMGKAVVMGERMDSDKSVVHERATLATQTGDSTGDKIHSDKGYKMSDFKQRWRNSASATVAGDMHREEE* # PASA_UPDATE: g5868.t1, single gene model update, valid-1, status:[pasa:asmbl_10092,status:3], valid-1 NODE_94_length_41103_cov_42.2485 . gene 31488 34532 . + . ID=g5868;Name=g5868.t1 NODE_94_length_41103_cov_42.2485 . mRNA 31488 34532 . + . ID=g5868.t1;Parent=g5868;Name=g5868.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 31488 31551 . + . ID=g5868.t1.utr5p1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 31488 31648 . + . ID=g5868.t1.exon1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 31552 31648 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 31775 31815 . + . ID=g5868.t1.exon2;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 31775 31815 . + 2 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 32004 32087 . + . ID=g5868.t1.exon3;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 32004 32087 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 32253 32408 . + . ID=g5868.t1.exon4;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 32253 32408 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 32754 32938 . + . ID=g5868.t1.exon5;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 32754 32938 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 33117 33251 . + . ID=g5868.t1.exon6;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 33117 33251 . + 1 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 33548 33662 . + . ID=g5868.t1.exon7;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 33548 33662 . + 1 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 33998 34087 . + . ID=g5868.t1.exon8;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 33998 34087 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . exon 34317 34532 . + . ID=g5868.t1.exon9;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . CDS 34317 34517 . + 0 ID=cds.g5868.t1;Parent=g5868.t1 NODE_94_length_41103_cov_42.2485 . three_prime_UTR 34518 34532 . + . ID=g5868.t1.utr3p1;Parent=g5868.t1 #PROT g5868.t1 g5868 MSNWMVCRLYKFIYPDVVQKEEGAIRIGVLGAANIAPMALVTPAKQVPGAVVAGVAARDRTKAEAFAKKHAIPKVYDSYQAILDDPAIDAVYIPLPNSHHKEWTLKALAAGKHVLCEKPIANNEEEARDMDEAGRRSGKVLMEAFHYRYHPAIARLRQVLDGGHIGDVQRAEARFIIPWFAFGKDDIRFQYELGGGSLMDNGCYVVDVIRLALGDAPFVGVKSAHATSTVADRVDAGTIAELEFEGGKSARMECALSGPPSYPSVTIQGSKGKIEFSNFVAPFVSYKMTTTLEDGKTITHQVYGEEECKATYVHQLRAFVAAVKGDRAANITPADAGVRNMRIIDAIYTASGLGVRGKPLATPPSQQ* # ORIGINAL: g5862.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 11591 13929 . + . ID=g5862;Name=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 11591 13929 . + . ID=g5862.t1;Parent=g5862;Name=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 11591 11883 . + . ID=g5862.t1.exon1;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 11591 11883 . + 0 ID=cds.g5862.t1;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 12096 12257 . + . ID=g5862.t1.exon2;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 12096 12257 . + 1 ID=cds.g5862.t1;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 12493 12601 . + . ID=g5862.t1.exon3;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 12493 12601 . + 1 ID=cds.g5862.t1;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 12930 13054 . + . ID=g5862.t1.exon4;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 12930 13054 . + 0 ID=cds.g5862.t1;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 13302 13929 . + . ID=g5862.t1.exon5;Parent=g5862.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 13302 13929 . + 1 ID=cds.g5862.t1;Parent=g5862.t1 #PROT g5862.t1 g5862 MTEANGGNTPHMPTMALHTTSPVSHTPSDPASNACESRESMMPRPPPSVADSALTGSTGKGPSDAPVVKSEPLDFYLPHEMRQNGRTPPPSDPRFTYGVYNGRAKKASTTTSNIKDAPDSAAAAAAAAVFALADAALADEGRFKKPEDEDERKVSHSVVERRRRDRINEKIAVLKNKIPTCVTQDLHKVMVLQKVVEYIDAINQENAALRRENQLLRRDVAAAHSGRIHGSFPYAYASATPASTAPLTAADSLPDAYGMAHVQGSQQLYGSNGTVHLAFPDNASFERAGEASVHHQHYQQMQQHHALQQHPLQQQQQHQQQAQQQHAIHPQHQHQHQHQQQQQQQQQQQQQVVQQQYHQQQSLQHQHAAHLQHPPYSQGHPFAHSHFQPPYLSQTPHHPTPDANAANHVAGPGHRHVTPGTHPGTIIMSQSQPLAHSY* # ORIGINAL: g5857.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 605 1654 . + . ID=g5857;Name=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 605 1654 . + . ID=g5857.t1;Parent=g5857;Name=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 605 717 . + . ID=g5857.t1.exon1;Parent=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 605 717 . + 0 ID=cds.g5857.t1;Parent=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 904 967 . + . ID=g5857.t1.exon2;Parent=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 904 967 . + 1 ID=cds.g5857.t1;Parent=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 1310 1654 . + . ID=g5857.t1.exon3;Parent=g5857.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 1310 1654 . + 0 ID=cds.g5857.t1;Parent=g5857.t1 #PROT g5857.t1 g5857 MDGRGMWLWLMRHPTVLIISVALAVFVAHHLYQYKAGRYVLLFTGIIGARVASVFAKKQIFEPTAPRLAQRERIRAERARVLANIRAANEAAAAAGGTDTQSLSLGAREQPPTPAELLMNISETPRPVVLSSLPVSPVNVDARDNRPRLRRHVSFSEQPVVHDFEKDGQAHDD* # ORIGINAL: g5864.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 16619 20373 . + . ID=g5864;Name=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 16619 20373 . + . ID=g5864.t1;Parent=g5864;Name=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 16619 16688 . + . ID=g5864.t1.exon1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 16619 16688 . + 0 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 16955 17267 . + . ID=g5864.t1.exon2;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 16955 17267 . + 2 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 17403 17524 . + . ID=g5864.t1.exon3;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 17403 17524 . + 1 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 17753 17858 . + . ID=g5864.t1.exon4;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 17753 17858 . + 2 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 18570 18721 . + . ID=g5864.t1.exon5;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 18570 18721 . + 1 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 18971 19166 . + . ID=g5864.t1.exon6;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 18971 19166 . + 2 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 19371 19476 . + . ID=g5864.t1.exon7;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 19371 19476 . + 1 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 19697 19812 . + . ID=g5864.t1.exon8;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 19697 19812 . + 0 ID=cds.g5864.t1;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 20040 20373 . + . ID=g5864.t1.exon9;Parent=g5864.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 20040 20373 . + 1 ID=cds.g5864.t1;Parent=g5864.t1 #PROT g5864.t1 g5864 MSVPPTRAAYTQAILSNLQQKKRVPRHVLIRAQPLNTSASHTNGTIFGKAAREATLPQPKVQRDALHTPVPVAALPKLDIRTDEKTMSTTSLSARPKSQSGSRSTENLRMDDGKEIPPWDPNFNGNTCRLTHAERMALAKRARLEARRAAELVRSKRDLLSQVVASCQWQRGDSCKELLYMLKDFINEDADEGIRLTRQQFLAGMKGHFAINDKDLEVLDRLFDVCAVGGKIDFREFSVNLASSMENDWESQLKFCFQAFDLNGDNHISRMEMARLLKVSLNAKSIKTREPVHPNAFDEKINEHLLHFNAIDTNNDHVISWDELKEAVTIDPILLEVFGYEVKHTHEALVATPLKADGLMWGLLPKPTEEQDRRVIAAQIKKMKKLLEDPRAFRTALDRAFSECDLDSNGSLSFDEMKSVMDTMTSWLGSRPIASDYMTCFERLDVNRDGSISITEFEPYFRESMMEGVAALEDYLKKPRVGQLEKRKSGTQPAAISVNALNGL* # ORIGINAL: g5860.t1 original gene structure, not modified by PASA NODE_94_length_41103_cov_42.2485 AUGUSTUS gene 6818 8906 . + . ID=g5860;Name=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS mRNA 6818 8906 . + . ID=g5860.t1;Parent=g5860;Name=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 6818 6884 . + . ID=g5860.t1.exon1;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 6818 6884 . + 0 ID=cds.g5860.t1;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 7271 7350 . + . ID=g5860.t1.exon2;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 7271 7350 . + 2 ID=cds.g5860.t1;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 7517 7670 . + . ID=g5860.t1.exon3;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 7517 7670 . + 0 ID=cds.g5860.t1;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 8042 8272 . + . ID=g5860.t1.exon4;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 8042 8272 . + 2 ID=cds.g5860.t1;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS exon 8800 8906 . + . ID=g5860.t1.exon5;Parent=g5860.t1 NODE_94_length_41103_cov_42.2485 AUGUSTUS CDS 8800 8906 . + 2 ID=cds.g5860.t1;Parent=g5860.t1 #PROT g5860.t1 g5860 MLLYLLSWASALILLLFCTLCMACGLYYMAEWVEEYTVLSKKIINNTVLVVLAVHVLLLIFDRIPIYLTLFGALSHVVYSAMLKTFPYFEFSSPQFIGSCVCVVLHHYFTFNYFAGVYFPFSEILAFFTICVWAVPFEFFISLSANESVLPMTASSTLSSLGGTGSSGVSDGDLSLEGREPVRKSRRQGLLSMFNYILQKKEDLLPSRHKHF* # PASA_UPDATE: g5863.t1, single gene model update, valid-1, status:[pasa:asmbl_10088,status:3], valid-1 NODE_94_length_41103_cov_42.2485 . gene 14835 16122 . + . ID=g5863;Name=g5863.t1 NODE_94_length_41103_cov_42.2485 . mRNA 14835 16122 . + . ID=g5863.t1;Parent=g5863;Name=g5863.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 14835 15074 . + . ID=g5863.t1.utr5p1;Parent=g5863.t1 NODE_94_length_41103_cov_42.2485 . exon 14835 16122 . + . ID=g5863.t1.exon1;Parent=g5863.t1 NODE_94_length_41103_cov_42.2485 . CDS 15075 15782 . + 0 ID=cds.g5863.t1;Parent=g5863.t1 NODE_94_length_41103_cov_42.2485 . three_prime_UTR 15783 16122 . + . ID=g5863.t1.utr3p1;Parent=g5863.t1 #PROT g5863.t1 g5863 MMGVGRVYQPARKVLRTRSGRFMAGVFAFAVAAFIYFELNSRQWVWYERESAKGMCHTPDKQLENLAILARKVDAVLNRLEVTHFLIYGSYIGAVRYGDILPWDTDLDFGVTASTINRYAMPELETAFAEENLRISYASWGGFFRIQSDEYDEKADIMVFDRFYGDGFYHRVGIESYVFFVNYRYYHKFPERLLEEPLPHMPFAGKNMTVPRGGLEILKYHYPNNWNREVRPAGC* # PASA_UPDATE: g5870.t1, single gene model update, valid-1, status:[pasa:asmbl_10093,status:12], valid-1 NODE_94_length_41103_cov_42.2485 . gene 38550 41024 . + . ID=g5870;Name=g5870.t1 NODE_94_length_41103_cov_42.2485 . mRNA 38550 41024 . + . ID=g5870.t1;Parent=g5870;Name=g5870.t1 NODE_94_length_41103_cov_42.2485 . five_prime_UTR 38550 38703 . + . ID=g5870.t1.utr5p1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 38550 38794 . + . ID=g5870.t1.exon1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 38704 38794 . + 0 ID=cds.g5870.t1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 39335 39564 . + . ID=g5870.t1.exon2;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 39335 39564 . + 2 ID=cds.g5870.t1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 39995 40113 . + . ID=g5870.t1.exon3;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 39995 40113 . + 0 ID=cds.g5870.t1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 40384 40498 . + . ID=g5870.t1.exon4;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 40384 40498 . + 1 ID=cds.g5870.t1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 40719 40862 . + . ID=g5870.t1.exon5;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 40719 40862 . + 0 ID=cds.g5870.t1;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . exon 40995 41024 . + . ID=g5870.t1.exon6;Parent=g5870.t1 NODE_94_length_41103_cov_42.2485 . CDS 40995 41024 . + 0 ID=cds.g5870.t1;Parent=g5870.t1 #PROT g5870.t1 g5870 MSVAEAPCYTLINPLTDAEGQTEQQLRKELEAGTPEVKTAALKRLIVQMINGDRFPSLLMIIVKFVMPLRDHIVKKLLLLYWEILPKTGTDGKLLREMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKAPELLEPVMPAIRACLEHRHAYVRRNAVLAIFTIHKNFENLIPDAPELIQNFLIAEQDMSCKRNAFMMLVHVDQPRALDYLATVIDQVQNFGDIMQLVIVELIHKSSPMNHLFA* # PASA_UPDATE: g11005.t1, single gene model update, valid-1, status:[pasa:asmbl_3343,status:12],[pasa:asmbl_3346,status:12], valid-1 NODE_2041_length_7970_cov_41.0649 . gene 6137 7784 . - . ID=g11005;Name=g11005.t1 NODE_2041_length_7970_cov_41.0649 . mRNA 6137 7784 . - . ID=g11005.t1;Parent=g11005;Name=g11005.t1 NODE_2041_length_7970_cov_41.0649 . five_prime_UTR 7749 7784 . - . ID=g11005.t1.utr5p1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . exon 7704 7784 . - . ID=g11005.t1.exon1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . CDS 7704 7748 . - 0 ID=cds.g11005.t1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . exon 7335 7443 . - . ID=g11005.t1.exon2;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . CDS 7335 7443 . - 0 ID=cds.g11005.t1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . exon 6930 7087 . - . ID=g11005.t1.exon3;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . CDS 6930 7087 . - 2 ID=cds.g11005.t1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . exon 6137 6709 . - . ID=g11005.t1.exon4;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . CDS 6230 6709 . - 0 ID=cds.g11005.t1;Parent=g11005.t1 NODE_2041_length_7970_cov_41.0649 . three_prime_UTR 6137 6229 . - . ID=g11005.t1.utr3p1;Parent=g11005.t1 #PROT g11005.t1 g11005 MQLRKRDFRPTWTLQVNEAVSGNYYPVNSRAAIRDANGNRQFTVLTDRSCGGGSIVDGQLELMIHRRLTADDSRGVGEPLDEPGEDGKGLIVRSKHFVVLSTGKDNSYSADIPREVASRVLFPLTLAFGAASELASTAVRSFVGLRSDFPANVNLITLERLDEEGFALVRLEHAFAANESAKYSVPITLALKTLLAHTDIEAATELTLSANMPLSTLKRLVWATEEGRLDAKEWQAASVLTEDLTITLNPMEIRTFLVKYSVV* # ORIGINAL: g11004.t1 original gene structure, not modified by PASA NODE_2041_length_7970_cov_41.0649 AUGUSTUS gene 1744 4102 . - . ID=g11004;Name=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS mRNA 1744 4102 . - . ID=g11004.t1;Parent=g11004;Name=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 4054 4102 . - . ID=g11004.t1.exon1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 4054 4102 . - 0 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 3684 3899 . - . ID=g11004.t1.exon2;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 3684 3899 . - 2 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 3390 3527 . - . ID=g11004.t1.exon3;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 3390 3527 . - 2 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 3107 3229 . - . ID=g11004.t1.exon4;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 3107 3229 . - 2 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 2702 2950 . - . ID=g11004.t1.exon5;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 2702 2950 . - 2 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 2064 2569 . - . ID=g11004.t1.exon6;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 2064 2569 . - 2 ID=cds.g11004.t1;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS exon 1744 1902 . - . ID=g11004.t1.exon7;Parent=g11004.t1 NODE_2041_length_7970_cov_41.0649 AUGUSTUS CDS 1744 1902 . - 0 ID=cds.g11004.t1;Parent=g11004.t1 #PROT g11004.t1 g11004 MLSSIRSFGNATPALRVAATAPSRALAHTQATPRFRPSKLAEVGLRNITPGISRLSNVVMKSGKGSWIVTDQGEKILDFTSGIGVTNTGHCHPRIVEAAQKQVATLIHGQCSLAFHDQMITLTDKLLEVVPKGLDSFYFWNSGAEAVEAAIKTARLATGKPNVIVFQGSYHGRTIGTMSMTTSKTIYRSRFGPLMPGVYVSPFPYARQLPDSLPRSQMSDYCVEQFELLLHQQSAPEETACAVIEPVLGEGGYVDPPADFLPRIKKICEKNGILLVADEVQSGFGRTGKMFAVEHYNVVPDILIMAKGLASGFPLSAIVTRKDIMSKTPPGGQGGTYAGNPVSCAAANATLDVFKEERILDNARARSRQLRDGLAKIRHRYPIAEVRGLGLMVGIELERHCAKGSAGDVAKECLNGGMMVMPTSVFEVMRLIPPLTVTADEVKLSLGILEGALERVFGSGRLLKGDDDVEEERAVSGKF* # PASA_UPDATE: g776.t1, single gene model update, valid-1, status:[pasa:asmbl_5497,status:12], valid-1 NODE_3059_length_4432_cov_40.5492 . gene 255 2281 . + . ID=g776;Name=g776.t1 NODE_3059_length_4432_cov_40.5492 . mRNA 255 2281 . + . ID=g776.t1;Parent=g776;Name=g776.t1 NODE_3059_length_4432_cov_40.5492 . five_prime_UTR 255 256 . + . ID=g776.t1.utr5p1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . exon 255 332 . + . ID=g776.t1.exon1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 257 332 . + 0 ID=cds.g776.t1;Parent=g776.t1;5_prime_partial=true NODE_3059_length_4432_cov_40.5492 . exon 629 707 . + . ID=g776.t1.exon2;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 629 707 . + 2 ID=cds.g776.t1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . exon 999 1128 . + . ID=g776.t1.exon3;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 999 1128 . + 1 ID=cds.g776.t1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . exon 1312 1406 . + . ID=g776.t1.exon4;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 1312 1406 . + 0 ID=cds.g776.t1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . exon 1559 1703 . + . ID=g776.t1.exon5;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 1559 1703 . + 1 ID=cds.g776.t1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . exon 1881 2281 . + . ID=g776.t1.exon6;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . CDS 1881 2024 . + 0 ID=cds.g776.t1;Parent=g776.t1 NODE_3059_length_4432_cov_40.5492 . three_prime_UTR 2025 2281 . + . ID=g776.t1.utr3p1;Parent=g776.t1 #PROT g776.t1 g776 VLSILQPPNLRVIGKLAVVRNSIGSDAYVSDEIIVSRAGVRVRVGNTDAEGRMVMADLLSQLRERAVSENLPNPMLFTIATLTGHAIRAYGPNYTAVVDNGPARISGVHRILSSAGDLWGEPYEVSTLRREDFAFVSPKSEYEDVLQANTLPSTMTDRGHQYPAAFLTIASGLDKHGGDSALPLPYSHVDIAGSGAMWPNIPSASPVVSFSASFILPSVGYV* # PASA_UPDATE: g777.t1, single gene model update, valid-1, status:[pasa:asmbl_5498,status:12], valid-1 NODE_3059_length_4432_cov_40.5492 . gene 2565 3162 . + . ID=g777;Name=g777.t1 NODE_3059_length_4432_cov_40.5492 . mRNA 2565 3162 . + . ID=g777.t1;Parent=g777;Name=g777.t1 NODE_3059_length_4432_cov_40.5492 . five_prime_UTR 2565 2579 . + . ID=g777.t1.utr5p1;Parent=g777.t1 NODE_3059_length_4432_cov_40.5492 . exon 2565 2736 . + . ID=g777.t1.exon1;Parent=g777.t1 NODE_3059_length_4432_cov_40.5492 . CDS 2580 2736 . + 0 ID=cds.g777.t1;Parent=g777.t1 NODE_3059_length_4432_cov_40.5492 . exon 2939 3162 . + . ID=g777.t1.exon2;Parent=g777.t1 NODE_3059_length_4432_cov_40.5492 . CDS 2939 3078 . + 2 ID=cds.g777.t1;Parent=g777.t1 NODE_3059_length_4432_cov_40.5492 . three_prime_UTR 3079 3162 . + . ID=g777.t1.utr3p1;Parent=g777.t1 #PROT g777.t1 g777 MSNDNEGSSCCCCCGCFHCICNFFRWLIVFFCFIPCLLISLIGCLIWIICLPFRLCCIGTLVVFMEHIVEKLIKAPFKIIAWAVHPHKKEEHHKQAHV* # PASA_UPDATE: g778.t1, single gene model update, valid-1, status:[pasa:asmbl_5495,status:12],[pasa:asmbl_5496,status:12], valid-1 NODE_3059_length_4432_cov_40.5492 . gene 3290 4286 . - . ID=g778;Name=g778.t1 NODE_3059_length_4432_cov_40.5492 . mRNA 3290 4286 . - . ID=g778.t1;Parent=g778;Name=g778.t1 NODE_3059_length_4432_cov_40.5492 . five_prime_UTR 4213 4286 . - . ID=g778.t1.utr5p1;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . exon 4132 4286 . - . ID=g778.t1.exon1;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . CDS 4132 4212 . - 0 ID=cds.g778.t1;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . exon 3888 3987 . - . ID=g778.t1.exon2;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . CDS 3888 3987 . - 0 ID=cds.g778.t1;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . exon 3290 3545 . - . ID=g778.t1.exon3;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . CDS 3397 3545 . - 2 ID=cds.g778.t1;Parent=g778.t1 NODE_3059_length_4432_cov_40.5492 . three_prime_UTR 3290 3396 . - . ID=g778.t1.utr3p1;Parent=g778.t1 #PROT g778.t1 g778 MSVPAGNVDVGEKVFKQRCAQCHTVEQGGKHKTGPNLHGLFGRKTGQAEGFTYTTANINKGITWSEETLFEYLLDPKKYIPGTKMVFAGIKKPQERADLIAYLKASTTA* # ORIGINAL: g6292.t1 original gene structure, not modified by PASA NODE_6279_length_601_cov_46.2928 AUGUSTUS gene 310 482 . + . ID=g6292;Name=g6292.t1 NODE_6279_length_601_cov_46.2928 AUGUSTUS mRNA 310 482 . + . ID=g6292.t1;Parent=g6292;Name=g6292.t1 NODE_6279_length_601_cov_46.2928 AUGUSTUS exon 310 482 . + . ID=g6292.t1.exon1;Parent=g6292.t1 NODE_6279_length_601_cov_46.2928 AUGUSTUS CDS 310 482 . + 2 ID=cds.g6292.t1;Parent=g6292.t1 #PROT g6292.t1 g6292 LRTATSPPWRCRSPWEVTSTQLLKMAASHFMMLLGTATPPPSRCWSPVGLALLEVCA # ORIGINAL: g12861.t1 original gene structure, not modified by PASA NODE_872_length_16457_cov_38.57 AUGUSTUS gene 13387 15754 . + . ID=g12861;Name=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS mRNA 13387 15754 . + . ID=g12861.t1;Parent=g12861;Name=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 13387 13508 . + . ID=g12861.t1.exon1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 13387 13508 . + 0 ID=cds.g12861.t1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 13724 13792 . + . ID=g12861.t1.exon2;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 13724 13792 . + 1 ID=cds.g12861.t1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 14152 14194 . + . ID=g12861.t1.exon3;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 14152 14194 . + 1 ID=cds.g12861.t1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 14826 14918 . + . ID=g12861.t1.exon4;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 14826 14918 . + 0 ID=cds.g12861.t1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 15258 15290 . + . ID=g12861.t1.exon5;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 15258 15290 . + 0 ID=cds.g12861.t1;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS exon 15590 15754 . + . ID=g12861.t1.exon6;Parent=g12861.t1 NODE_872_length_16457_cov_38.57 AUGUSTUS CDS 15590 15754 . + 0 ID=cds.g12861.t1;Parent=g12861.t1 #PROT g12861.t1 g12861 MAENPNNPVVFFDISIGGQEAGRMKMELFADVVPKTAENFRQFCTGEHKKDGNPIGFKGATFHRVIKDFMIQGGDFVKGDGTGRMSIYGDSFPDENFKLKHTGPGLLSMANSGPNTNGCQFFVTCAKCDFLDNKHVVFGKIIDGWVVMRKVENVPTGPNNRPKIPVVITQCGEM* # PASA_UPDATE: g12860.t1, single gene model update, valid-1, status:[pasa:asmbl_9786,status:12], valid-1 NODE_872_length_16457_cov_38.57 . gene 5778 12501 . - . ID=g12860;Name=g12860.t1 NODE_872_length_16457_cov_38.57 . mRNA 5778 12501 . - . ID=g12860.t1;Parent=g12860;Name=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 11920 12501 . - . ID=g12860.t1.exon1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 11920 12501 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 10633 11649 . - . ID=g12860.t1.exon2;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 10633 11649 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 10470 10531 . - . ID=g12860.t1.exon3;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 10470 10531 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 9317 10233 . - . ID=g12860.t1.exon4;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 9317 10233 . - 1 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 8812 8999 . - . ID=g12860.t1.exon5;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 8812 8999 . - 2 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 8033 8473 . - . ID=g12860.t1.exon6;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 8033 8473 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 7611 7841 . - . ID=g12860.t1.exon7;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 7611 7841 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 7264 7334 . - . ID=g12860.t1.exon8;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 7264 7334 . - 0 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 6680 6747 . - . ID=g12860.t1.exon9;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 6680 6747 . - 1 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . exon 5778 6527 . - . ID=g12860.t1.exon10;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . CDS 5911 6527 . - 2 ID=cds.g12860.t1;Parent=g12860.t1 NODE_872_length_16457_cov_38.57 . three_prime_UTR 5778 5910 . - . ID=g12860.t1.utr3p1;Parent=g12860.t1 #PROT g12860.t1 g12860 MACRHRYPHRVAVAIQSLIALALVSLASAAPPYGGGGGNALLFDGKTQWVSIDSVPTVSSNFTIEMYVNPCTNLDQQTFIMKLHPRGGTLLEVSYLDNSLSIQWEGGKWSTLPKLARPHHFAFTSKQLTSSTSQVIGYIDGVEWGRSTQTTVPSALPKDALAQSMNTRWYLGMRASRVVRGFELARALCGTMDEVRVWSYARSAAQIQSTMNLVIPTADLSLPGYAGLEGYWSFDESSGFSSTGRTHDNNAFLGGGVTDEAPSFVPSSFPLAGTYIAATGKESADLVVSIRGLLMPDCAFNNSRCDQLTYVLLSNPSNGTIYEAGAGVAVGAALNVTTSSNGVNMTIPSADGSRAIVYRPQPQKSGNPYDTFRVAVCDNTGACGGPYLVQINIAQNTVPSAGRAFGLYCNGETSYVNLLSNWQPPVDFTVEMWARFDSSRIGQALLGKHSAAGDNIFVWAAYTNGFQVTVRSKSFVNVVAPDSAPTHMALVFKLVNNGTATNVTFYKNGALAWQSTLASTFGDMSGLPWTLCQEYDTSTSGPVTSDFFRGYIDELRFWNGTRTQADIVANMNSRLNGNEANLAVYLNFDSKTLKNGAVSGPSFDNVPGFLGQPIGVIEPLTQAQQIAQRILPSVFAVPGSDLVFEVQEGRSFNITLDAFDPDGDAVSMKLAVLPSQGSVLQKATAVPIAAVNGPILGQSATYKAISGIGPHHDSFQYAVADYLSSAPAFGRVNITVLETGPAILSFVASDPSNKDAVYGAGDVVTLTFERDTNMPPVDSMGLVNGIVSFTQTIGGNYFGRWVNARTLDIVIVTASNTTVPIIGTTRATVVGDVRSASLLSTRSTSTSPSLSGSWGVPVTAASGSDDNTALLAGVIVPVVTTVVVAAIVAFVVFRKKLNDKVAVMNNLTIDIQDIDFKESIGEGATSEVFRALYRSTVVAVKVIRASALLKKEKEEHDSADMHDSKSSRPSIFNTTGSSEADKTSTANGTVAQSADGTRSGRRTDALSNASARKTNRALWNNMKGLWKNARRVTTRTRSSRASESKKTLDFLAEVQTMQTLRHPNIVLFMGACVRHPDLFIVTEYMSKGALDTLLQNDEFNMSWRVRIDFALDAARGMQFLHSLTPPVVHLDLKSPNLLIDDRMRLKVSDFGLSQTVMKGTNAAARGTLMWMAPEVLSAQTDCLSVKADVYSYGIVLWELCARVYPYTNVSSSSTNAMGLAVKVVMQDLRPSPLPIGCPEFNKIMEDCWSAVPAARPSFVEVVSALEELRFSSWKEPFPNREQLLATSAADDIDHVQWDDASAAVKCAPGDNRIDMIRTMVGDFKIDIGAGGRIVGAGPAALAGTTASGSARTAVGAPGSSPDDHGDAIIDDILHSPAPIPCTVAPTTPEQFRDILDD* # PASA_UPDATE: g12859.t1, single gene model update, valid-1, status:[pasa:asmbl_9784,status:12],[pasa:asmbl_9785,status:12], valid-1 NODE_872_length_16457_cov_38.57 . gene 168 4831 . - . ID=g12859;Name=g12859.t1 NODE_872_length_16457_cov_38.57 . mRNA 168 4831 . - . ID=g12859.t1;Parent=g12859;Name=g12859.t1 NODE_872_length_16457_cov_38.57 . five_prime_UTR 4774 4831 . - . ID=g12859.t1.utr5p1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . five_prime_UTR 4452 4476 . - . ID=g12859.t1.utr5p2;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 4774 4831 . - . ID=g12859.t1.exon1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 4251 4476 . - . ID=g12859.t1.exon2;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 4251 4451 . - 0 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 3769 3956 . - . ID=g12859.t1.exon3;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 3769 3956 . - 0 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 3395 3597 . - . ID=g12859.t1.exon4;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 3395 3597 . - 1 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 2919 3170 . - . ID=g12859.t1.exon5;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 2919 3170 . - 2 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 1978 2708 . - . ID=g12859.t1.exon6;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 1978 2708 . - 2 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 1351 1796 . - . ID=g12859.t1.exon7;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 1351 1796 . - 0 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 1007 1154 . - . ID=g12859.t1.exon8;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 1007 1154 . - 1 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 508 646 . - . ID=g12859.t1.exon9;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 508 646 . - 0 ID=cds.g12859.t1;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . exon 168 292 . - . ID=g12859.t1.exon10;Parent=g12859.t1 NODE_872_length_16457_cov_38.57 . CDS 168 292 . - 2 ID=cds.g12859.t1;Parent=g12859.t1;3_prime_partial=true #PROT g12859.t1 g12859 MARGVHTRCVRRSSAQMPHSATMHSLFVIACVVFAMADLSLAQKTFNFTIIETNTMTGQLFEGSYKGSLAGGIARTATAIATLKANATTGPAVLVVDTGTLLGNNRILAQMKSTSYAAIFKAYIPYDYIGIGTGETFFGTSSWYDFLAITGYKAVCTNVDDRGFTYYADYLQPYYVHTLTLPDSTTAKLGIIGYIPEDYCTQTKCEFRIKPTTIISSLTDTVQRLRTVENVDLVLCISGAGIELDVPVLAAVPGIDILLGGKHYRDATPVFDVPLTRPGPNGATVHIGASYGLQQTLGNFVFQVVNGRVVASTGRDVVLYACADDNNPSQFCVPAHPNVSTMANALKTQVNARIKVIGSSLAPIPDKISCRSVQCVYGDIQADSLVAYMSGQCDFALINSGNIRTNIPVGNVTNFDTEDNIFIGTTVSVVQVKGSTIANALQISSTRIGLPGFLQLSRGIRASFDTSRPAGVRVYNISVAERVGAGALLWPTTQGNSSFPRAPLQFSPLRLDRVYYACITSFLRTGGDGYTMFRDEPVDALDNGPLMNDAIASYLTAISPFNITLDGRIKIGPAPANALPVAGACAYDVTLTTANTTHTDLCSGATRFSQATWVGVAPVSQNTSLANGSYVMVPPRMIEVTLTRTYTPAPESDLLLVYDGARTNVLSVYPSDGSTIIGRFGGPGAVPSFFLVPAASFAFSLKITLPTNRSTLAFTTRALYTCPAGYELNGATCRACAAETFKASAGDVLRCAACGAGRSTGGAVGRASCDVSLPLATHSSSSTSLSLVLPIALSLGCAVLAVVAAFYVLSR # PASA_UPDATE: g11308.t1, single gene model update, valid-1, status:[pasa:asmbl_5003,status:3], valid-1 NODE_2786_length_5125_cov_51.4885 . gene 1317 4213 . + . ID=g11308;Name=g11308.t1 NODE_2786_length_5125_cov_51.4885 . mRNA 1317 4213 . + . ID=g11308.t1;Parent=g11308;Name=g11308.t1 NODE_2786_length_5125_cov_51.4885 . five_prime_UTR 1317 1492 . + . ID=g11308.t1.utr5p1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . exon 1317 1508 . + . ID=g11308.t1.exon1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . CDS 1493 1508 . + 0 ID=cds.g11308.t1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . exon 1604 1863 . + . ID=g11308.t1.exon2;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . CDS 1604 1863 . + 2 ID=cds.g11308.t1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . exon 1965 2099 . + . ID=g11308.t1.exon3;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . CDS 1965 2099 . + 0 ID=cds.g11308.t1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . exon 2193 2815 . + . ID=g11308.t1.exon4;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . CDS 2193 2815 . + 0 ID=cds.g11308.t1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . exon 2980 4213 . + . ID=g11308.t1.exon5;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . CDS 2980 4177 . + 1 ID=cds.g11308.t1;Parent=g11308.t1 NODE_2786_length_5125_cov_51.4885 . three_prime_UTR 4178 4213 . + . ID=g11308.t1.utr3p1;Parent=g11308.t1 #PROT g11308.t1 g11308 MEDTEAVLDGGLIRPRAKSHGDAAQLHHGHRTSDSPVLEQLKRAASFDSFPEGDDSELELSPPSVRRSPSIDALAADDALTGNIPSIFQCDKEGYLYRKHDVAADGKKSANRVWFKYYVALAGSDLFFFRDHLEPLQGKRHVAKMTVKGSISDIAFNYKKKKHVFRLKMPNGDEFLFQATDHGDMVEWIQKVQIGAAAGDETEDASLDLIRRKATQAREFVSSPKASPMSQRRTLGRNSREKDKLVLQSQVDGADTPPSGDRPPSSPDVNSKRHGHHGPHLREKGALMKRVGSLFKKQASASAELVFGVSLEDHLEGKGRNVPLIVEQCIAEVEKRGVDNIGIYRLSGNSTFVQALKEEYNTSDPAVGVNLSDEKWDDIHTVTGTLKLYFRELPDPMIPRAMYPNFMAAVRIPDYEERLYTVKDLVRALPAAHRDTLRCIVRHLRCVADSADLNKMATNNLAIVFGPTLARPPPDDTMAMLSDMAHQCTLVESMISSFEWMFAEDPPLEENTLSAGADASNDPTTSSSVPTSEKADMSSLERTPIDDGDRRPQSGMSVKSARDDDSAMVPTPVVSRPGSWASAFDAAWAAAAGDSVDGPLSTSAGCAETDRPTEASLCEPTAVANASAVGGVVPLQAADDGTLCLSVTGGCETVADAGGAAELSTITVDTDVTPLSTDTPVAEPVGHGADAVDSVGSADSVDAAGAGTADAVSDGTVGVEGVTDKEPSHDNDYDLLGIPMTAV* # ORIGINAL: g1401.t1 original gene structure, not modified by PASA NODE_1351_length_11849_cov_49.774 AUGUSTUS gene 10244 11830 . + . ID=g1401;Name=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS mRNA 10244 11830 . + . ID=g1401.t1;Parent=g1401;Name=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 10244 10331 . + . ID=g1401.t1.exon1;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 10244 10331 . + 0 ID=cds.g1401.t1;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 10512 10628 . + . ID=g1401.t1.exon2;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 10512 10628 . + 2 ID=cds.g1401.t1;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 10999 11159 . + . ID=g1401.t1.exon3;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 10999 11159 . + 2 ID=cds.g1401.t1;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 11363 11465 . + . ID=g1401.t1.exon4;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 11363 11465 . + 0 ID=cds.g1401.t1;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 11733 11830 . + . ID=g1401.t1.exon5;Parent=g1401.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 11733 11830 . + 2 ID=cds.g1401.t1;Parent=g1401.t1 #PROT g1401.t1 g1401 MGNCCCGSDSPSGITMTDMPKVALDPQYMGSDCVIVKNGQRLCGKGAVLANAPLVQDKSYFEMKVQAGGLWGIGVASRDVNLEGVPLGSCSHSWVLRSDGTTCHKNEVLQKIESHFEEGDVMGCAYDHIQLRFFHNGKSLECPLMGIKGQVYPVFYVDEGATLDVIFDSFTHPPPNGFTGIMFEKSIL* # PASA_UPDATE: g1399.t1, single gene model update, valid-1, status:[pasa:asmbl_1294,status:3], valid-1 NODE_1351_length_11849_cov_49.774 . gene 1086 4707 . - . ID=g1399;Name=g1399.t1 NODE_1351_length_11849_cov_49.774 . mRNA 1086 4707 . - . ID=g1399.t1;Parent=g1399;Name=g1399.t1 NODE_1351_length_11849_cov_49.774 . five_prime_UTR 4649 4707 . - . ID=g1399.t1.utr5p1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 4420 4707 . - . ID=g1399.t1.exon1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 4420 4648 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 4144 4199 . - . ID=g1399.t1.exon2;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 4144 4199 . - 2 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 3969 3976 . - . ID=g1399.t1.exon3;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 3969 3976 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 3741 3834 . - . ID=g1399.t1.exon4;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 3741 3834 . - 1 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 3368 3496 . - . ID=g1399.t1.exon5;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 3368 3496 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 2856 2907 . - . ID=g1399.t1.exon6;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 2856 2907 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 2652 2753 . - . ID=g1399.t1.exon7;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 2652 2753 . - 2 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 2477 2526 . - . ID=g1399.t1.exon8;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 2477 2526 . - 2 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 2055 2216 . - . ID=g1399.t1.exon9;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 2055 2216 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 1798 1849 . - . ID=g1399.t1.exon10;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 1798 1849 . - 0 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 1480 1581 . - . ID=g1399.t1.exon11;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 1480 1581 . - 2 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . exon 1086 1303 . - . ID=g1399.t1.exon12;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . CDS 1239 1303 . - 2 ID=cds.g1399.t1;Parent=g1399.t1 NODE_1351_length_11849_cov_49.774 . three_prime_UTR 1086 1238 . - . ID=g1399.t1.utr3p1;Parent=g1399.t1 #PROT g1399.t1 g1399 MSSNGDAMEVTAGEEVSNVDAAPAETRGGKRAFGGRRQFGARRTGAGANSVRENRVYVGNLAYSVRWQELKDLMGQQIGEVVFAEVFEQPNGMSKGCGIVEFARAEDAQKAIQTLNDTEISGRRIFVREDRETGAGSGAAAPAPAHFQPRAVPVIAPVVHGDRAGKQVFVGNLDYGVSWQDLKDFFRTAGTIVRADIIGGPDGRSRGQGTVLFEHPHEAQKAIEVFNGQEFHGRSLDVHLDRYAINAYGAVPTARPLQFQGYAPINNGFVHAHAVPVPMNGVEGSSGCQVFITNLPYTTTWQDLKDTFRQAGNIIRADVLMGADGRSRGQGTILFQSADEASRAISMFNGSAIEGRNVEVRLDKYA* # ORIGINAL: g1398.t1 original gene structure, not modified by PASA NODE_1351_length_11849_cov_49.774 AUGUSTUS gene 179 253 . + . ID=g1398;Name=g1398.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS mRNA 179 253 . + . ID=g1398.t1;Parent=g1398;Name=g1398.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS exon 179 253 . + . ID=g1398.t1.exon1;Parent=g1398.t1 NODE_1351_length_11849_cov_49.774 AUGUSTUS CDS 179 253 . + 0 ID=cds.g1398.t1;Parent=g1398.t1 #PROT g1398.t1 g1398 HPFLKKAAPLHSLQPLIAAARANH* # PASA_UPDATE: g1400.t1, single gene model update, valid-1, status:[pasa:asmbl_1293,status:3], valid-1 NODE_1351_length_11849_cov_49.774 . gene 5360 7286 . + . ID=g1400;Name=g1400.t1 NODE_1351_length_11849_cov_49.774 . mRNA 5360 7286 . + . ID=g1400.t1;Parent=g1400;Name=g1400.t1 NODE_1351_length_11849_cov_49.774 . five_prime_UTR 5360 5408 . + . ID=g1400.t1.utr5p1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . exon 5360 5410 . + . ID=g1400.t1.exon1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . CDS 5409 5410 . + 0 ID=cds.g1400.t1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . exon 5787 5896 . + . ID=g1400.t1.exon2;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . CDS 5787 5896 . + 1 ID=cds.g1400.t1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . exon 6259 6502 . + . ID=g1400.t1.exon3;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . CDS 6259 6502 . + 2 ID=cds.g1400.t1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . exon 6765 7286 . + . ID=g1400.t1.exon4;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . CDS 6765 7074 . + 1 ID=cds.g1400.t1;Parent=g1400.t1 NODE_1351_length_11849_cov_49.774 . three_prime_UTR 7075 7286 . + . ID=g1400.t1.utr3p1;Parent=g1400.t1 #PROT g1400.t1 g1400 MVSLRLQKRLAAAVLKCGKRKVWLDPNEISEIQTANSRQNIRKLVKDGLIFRKPQAIHSRARVRKTHEARSKGRHMGTGKRHGTADARMPQKVIWIRRQRVLRRLLRKYREAQKIDKHLYHDLYMKAKGNVFKNKRVLMEFIHKRKAERARAKLIQDQSDARRAKTKASRQRREDRVNAKRSEAVVGAQAESEQAQAKRDEKSQTKEAAKTTKKAPKAQKA* # ORIGINAL: g12011.t1 original gene structure, not modified by PASA NODE_1467_length_11103_cov_42.4849 AUGUSTUS gene 1148 3435 . + . ID=g12011;Name=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS mRNA 1148 3435 . + . ID=g12011.t1;Parent=g12011;Name=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 1148 1229 . + . ID=g12011.t1.exon1;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 1148 1229 . + 0 ID=cds.g12011.t1;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 1486 1571 . + . ID=g12011.t1.exon2;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 1486 1571 . + 2 ID=cds.g12011.t1;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 1827 2321 . + . ID=g12011.t1.exon3;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 1827 2321 . + 0 ID=cds.g12011.t1;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 2556 2706 . + . ID=g12011.t1.exon4;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 2556 2706 . + 0 ID=cds.g12011.t1;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 2813 3435 . + . ID=g12011.t1.exon5;Parent=g12011.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 2813 3435 . + 2 ID=cds.g12011.t1;Parent=g12011.t1 #PROT g12011.t1 g12011 MLDDAVCKSSLSWSEEGDSIVILDAEMFTRNAIPRYFKHQSLTSFIRQLNMYGFHKVIHSRYSVQNPASLEFNHSLFLRGRFDLIPLIKRRAPPSTNGGRDSSAPNNTRTYGSDPEGSDREDEADGLGLSMNINNNINNYNNSINSVVINGVNGDGDRSGRSITSHTSSPPVLCPCARSNGRGGSVCGGSPDVSTTAMIEQLSRAHEEMKDMIGKLRLENASLAHIVSANQVTMQRQTEQISRLFQLVGGPANPINAPGMMISNVPVSNNDGLLDYLDIPQLPMAMPSFPVVPRPSELLRADGQPLPLPLSVPPTDLSLSYGGGVDAMDTTTTPPYMRAGFNASVRPTSPNSIAAQLRRMDQRRMSSPSMPTPPAMSFNVRGPVTIPQSPSYPFPSQATFMGPRAPSIDKRKTEWTFSSAAGDPPSHMAGGVLSAVTPNQVSLSVSYPDSKRQKIMHTPQDAYMALIGMGERPLHTGM* # PASA_UPDATE: g12012.t1, single gene model update, valid-1, status:[pasa:asmbl_1682,status:3], valid-1 NODE_1467_length_11103_cov_42.4849 . gene 6899 9103 . + . ID=g12012;Name=g12012.t1 NODE_1467_length_11103_cov_42.4849 . mRNA 6899 9103 . + . ID=g12012.t1;Parent=g12012;Name=g12012.t1 NODE_1467_length_11103_cov_42.4849 . five_prime_UTR 6899 7051 . + . ID=g12012.t1.utr5p1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . exon 6899 7104 . + . ID=g12012.t1.exon1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . CDS 7052 7104 . + 0 ID=cds.g12012.t1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . exon 7252 7334 . + . ID=g12012.t1.exon2;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . CDS 7252 7334 . + 1 ID=cds.g12012.t1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . exon 7447 7793 . + . ID=g12012.t1.exon3;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . CDS 7447 7793 . + 2 ID=cds.g12012.t1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . exon 7928 8216 . + . ID=g12012.t1.exon4;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . CDS 7928 8216 . + 0 ID=cds.g12012.t1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . exon 8377 9103 . + . ID=g12012.t1.exon5;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . CDS 8377 8639 . + 2 ID=cds.g12012.t1;Parent=g12012.t1 NODE_1467_length_11103_cov_42.4849 . three_prime_UTR 8640 9103 . + . ID=g12012.t1.utr3p1;Parent=g12012.t1 #PROT g12012.t1 g12012 MATDALSTAPAFLQKLLKMVEDPECGDMIGWSMTGDSILVYDPDLLARNVLPRFFKHNNFSSFVRQLNMYGFHKVINPQQPGNMGNPPDCAFDWEFQNPHFQRNRPDLLAQVRRKTPGSMVEERRVPNEDLQRLKEDCQRDIENTRQTLIETINRFTTEFNTLQVMSKETQSRLQRSELQTTKMMRFLAALYAPSLTRSVYSIEDLANVAATGGMANNSNNGTPNNGAMNNGTMNNGQQPPAHPQRPPATMGSSERPAKRQRSQSPVNYGLNESDMPWAMPTAHQSYGASAAFPFTDPSTLSGYNFGGLNGANNVQVDVMSVSEFMDEHGNVTDILGENSISSM* # ORIGINAL: g12010.t1 original gene structure, not modified by PASA NODE_1467_length_11103_cov_42.4849 AUGUSTUS gene 207 758 . + . ID=g12010;Name=g12010.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS mRNA 207 758 . + . ID=g12010.t1;Parent=g12010;Name=g12010.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 207 380 . + . ID=g12010.t1.exon1;Parent=g12010.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 207 380 . + 1 ID=cds.g12010.t1;Parent=g12010.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS exon 587 758 . + . ID=g12010.t1.exon2;Parent=g12010.t1 NODE_1467_length_11103_cov_42.4849 AUGUSTUS CDS 587 758 . + 1 ID=cds.g12010.t1;Parent=g12010.t1 #PROT g12010.t1 g12010 SIPNLVTSTPDPVMEGPNGVSNDASYNASTTQAPNTTSPGNRPYTGTPHMSFLQKLLALSLGRPSSVFARAPFTFHAPPSSSAVLNWCGLASVATFAVAVLPCAVAGSGESVVV* # PASA_UPDATE: g9867.t1, single gene model update, valid-1, status:[pasa:asmbl_3100,status:3], valid-1 NODE_1956_length_8360_cov_40.1528 . gene 2463 7218 . - . ID=g9867;Name=g9867.t1 NODE_1956_length_8360_cov_40.1528 . mRNA 2463 7218 . - . ID=g9867.t1;Parent=g9867;Name=g9867.t1 NODE_1956_length_8360_cov_40.1528 . five_prime_UTR 7123 7218 . - . ID=g9867.t1.utr5p1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 7054 7218 . - . ID=g9867.t1.exon1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 7054 7122 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 6895 6968 . - . ID=g9867.t1.exon2;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 6895 6968 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 6628 6734 . - . ID=g9867.t1.exon3;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 6628 6734 . - 1 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 6343 6420 . - . ID=g9867.t1.exon4;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 6343 6420 . - 2 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 6160 6239 . - . ID=g9867.t1.exon5;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 6160 6239 . - 2 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 5907 6044 . - . ID=g9867.t1.exon6;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 5907 6044 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 5618 5727 . - . ID=g9867.t1.exon7;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 5618 5727 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 5353 5455 . - . ID=g9867.t1.exon8;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 5353 5455 . - 1 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 5087 5154 . - . ID=g9867.t1.exon9;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 5087 5154 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 4699 4822 . - . ID=g9867.t1.exon10;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 4699 4822 . - 1 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 4386 4464 . - . ID=g9867.t1.exon11;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 4386 4464 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 3982 4078 . - . ID=g9867.t1.exon12;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 3982 4078 . - 2 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 3629 3713 . - . ID=g9867.t1.exon13;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 3629 3713 . - 1 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 3369 3489 . - . ID=g9867.t1.exon14;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 3369 3489 . - 0 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 3035 3166 . - . ID=g9867.t1.exon15;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 3035 3166 . - 2 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . exon 2463 2813 . - . ID=g9867.t1.exon16;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . CDS 2584 2813 . - 2 ID=cds.g9867.t1;Parent=g9867.t1 NODE_1956_length_8360_cov_40.1528 . three_prime_UTR 2463 2583 . - . ID=g9867.t1.utr3p1;Parent=g9867.t1 #PROT g9867.t1 g9867 MAAHGSKGYISSIDQGTSSTRFLIFDSSNGEMVASHQVDNTQFNPQTGWCEHDPTDILRQVTECVDRVVADCRTNGIDLSLLKGVGITNQRETTVMWDKTTGLPLFRAIVWHDARTSDIVDELVASLPNENANHFQERAGLPIKNYFSAVKIRWLMQNVPEVKAACDAGRAMFGNIDSWLIWHLTGGVNGGVHVTDVTNASRTLLMNIKTLQWDAELCDFFGVPMNVLPEIRSSAEVYGKLTSTALKGLPIAGCLGDQQAALVGQLCFHKGEAKNTYGSGCFLLYNTGETPILSRHNLLTTVAYKLGPNAPAVYALEGSVAMAGLAIGWLRNNLGLIASSGDVETMATSVPDTAGVYFVPAFTGLFAPHWRSDARGIIVGLTQSTTKAHVVRATVEAVCFQTREILDAMALDCGASFRRLKVDGGMTINNFLMRQQANTLGIDVVRPSMAETTALGAAIAAGIATDSFHLETFANTARVETFSPDSVSGTHEAREHRYAHWRAAVSRSLGWAPHNHGTAPEPLYEHPPASACSLPCSSAGVSGVLGLAVAFVFGVVIGRAVLGR* # ORIGINAL: g9866.t1 original gene structure, not modified by PASA NODE_1956_length_8360_cov_40.1528 AUGUSTUS gene 337 2101 . - . ID=g9866;Name=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS mRNA 337 2101 . - . ID=g9866.t1;Parent=g9866;Name=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 1934 2101 . - . ID=g9866.t1.exon1;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 1934 2101 . - 0 ID=cds.g9866.t1;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 1644 1780 . - . ID=g9866.t1.exon2;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 1644 1780 . - 0 ID=cds.g9866.t1;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 1383 1504 . - . ID=g9866.t1.exon3;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 1383 1504 . - 1 ID=cds.g9866.t1;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 903 1013 . - . ID=g9866.t1.exon4;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 903 1013 . - 2 ID=cds.g9866.t1;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 337 665 . - . ID=g9866.t1.exon5;Parent=g9866.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 337 665 . - 2 ID=cds.g9866.t1;Parent=g9866.t1 #PROT g9866.t1 g9866 MAHTRHAPLLVVAVAVVVAVVGYCDAYSLNDHTAIMQLAIREFNECYSTPTFNISESDSSLMVRNDLEEDVNVVGKWLYKFSHFYNPRKPEIKICTADLYCRYNSSIRIMGLQDDIAKLIEKKDAKLSEFLDPLAHAAHHIQDMASPPHVVPVMHGLTDGYENYVSAEALQPSARCSHSGVPSSLIEILDATALATLDAIASRDCVYTVNGTHTISDWSKFWQEGVDGESFGDYGAFGNNVGSAAFTSRDGPVVVDAAVYAGFKATRMRAAVDATIQALRWLQKALPK* # ORIGINAL: g9868.t1 original gene structure, not modified by PASA NODE_1956_length_8360_cov_40.1528 AUGUSTUS gene 7622 8253 . + . ID=g9868;Name=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS mRNA 7622 8253 . + . ID=g9868.t1;Parent=g9868;Name=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 7622 7665 . + . ID=g9868.t1.exon1;Parent=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 7622 7665 . + 0 ID=cds.g9868.t1;Parent=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 7773 7879 . + . ID=g9868.t1.exon2;Parent=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 7773 7879 . + 1 ID=cds.g9868.t1;Parent=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS exon 8123 8253 . + . ID=g9868.t1.exon3;Parent=g9868.t1 NODE_1956_length_8360_cov_40.1528 AUGUSTUS CDS 8123 8253 . + 2 ID=cds.g9868.t1;Parent=g9868.t1 #PROT g9868.t1 g9868 MKFAHRLISQTHVPWAENYINFNNLKEVLLSSRDRRRSISPTAQLVSGVVGHDDESGDSRSFAQRLDEEINKVNAFFLHKSDALENQLASLTSE # ORIGINAL: g6020.t1 original gene structure, not modified by PASA NODE_2416_length_6371_cov_43.7359 AUGUSTUS gene 2026 5915 . + . ID=g6020;Name=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS mRNA 2026 5915 . + . ID=g6020.t1;Parent=g6020;Name=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 2026 2206 . + . ID=g6020.t1.exon1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 2026 2206 . + 0 ID=cds.g6020.t1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 2435 2512 . + . ID=g6020.t1.exon2;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 2435 2512 . + 2 ID=cds.g6020.t1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 2663 3004 . + . ID=g6020.t1.exon3;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 2663 3004 . + 2 ID=cds.g6020.t1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 3388 3590 . + . ID=g6020.t1.exon4;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 3388 3590 . + 2 ID=cds.g6020.t1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 3838 5742 . + . ID=g6020.t1.exon5;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 3838 5742 . + 0 ID=cds.g6020.t1;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS exon 5907 5915 . + . ID=g6020.t1.exon6;Parent=g6020.t1 NODE_2416_length_6371_cov_43.7359 AUGUSTUS CDS 5907 5915 . + 0 ID=cds.g6020.t1;Parent=g6020.t1 #PROT g6020.t1 g6020 MSFRDTFFRGSQRLLKKLSKGQGKSGEPFGLDLEHAAASPRAENGIPWVIWRLVEYLTKNGLGQEGLFRVGGSVRVVNDLKSEFEKHGDADLDNARDVPAVASLFKQYLRELPMAVIPVDFNDSFYAHATGHPSKEQIESLRDLVVSLPEVNRAVLKFIIRFLSLVSSESAVNKMTSSNIAIVFAQCLFKMVQDAATSPHAVMDEQNRAAAIVNSFITFYADIFEIPFTGNSPDRPAPAKPAPYAARKSIEPLRGTSISSIDSEEWEENPYQDIDKFRDHIRGGSDHIRGASEGSVSEPIYATVVKRKGSPDNRPHLIINGDSNMVGIESPHRAASPVFSPPTTPRSSEQVYTLVRDCISEFLWGAQPSLTALSGGSVLPALSSVRSSGAPELPVMPISSSANTMAAAQYRKSIGEESRDKQLAQPSQQHQQQQQQQPRGSVGGSDQMPELLQQGRGSIGQSVKPAVPDRPSSLGASNNSTPRSSTPASGATTPVLSRASIVAGEEGPPQPPPRASKIAAGLALASQAQTQTQQWAQPSGVAVGDARGGSADSTPSSASTQGIPVKSQRMSMDDGGVSGGRGTLRDSREIMAMQTQAAKRTLAQSQQQHIMATDSNQALSPLARPSELRSLAPQHSLSMSMTEDSMARGSMDRSGNSSGFQRRDVRGAVSSLEDASVTTVGSGDGQWTSSVGGTGSSSSQPPKHFEGVTYTEADMDRMAGESRVLFKRIREFESAFEERHGRKPHGEIDKGPIIETILRYKSLRRVLKELGEADRRVPVGREPVDNGGHQMYSAVTSGSVVTPAQTRSPIQSRRSLLPGNTAASLSVDTSMSMVGQSGMQASMSNTLNMTGGLNMTGALNATAGGSNFNTAPAHVFGPIRSLANALERLSHERQATGRPHELQGL* # PASA_UPDATE: g4001.t1, single gene model update, valid-1, status:[pasa:asmbl_10188,status:3], valid-1 NODE_975_length_15207_cov_41.421 . gene 4949 7073 . + . ID=g4001;Name=g4001.t1 NODE_975_length_15207_cov_41.421 . mRNA 4949 7073 . + . ID=g4001.t1;Parent=g4001;Name=g4001.t1 NODE_975_length_15207_cov_41.421 . five_prime_UTR 4949 5107 . + . ID=g4001.t1.utr5p1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . exon 4949 5244 . + . ID=g4001.t1.exon1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . CDS 5108 5244 . + 0 ID=cds.g4001.t1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . exon 5521 5617 . + . ID=g4001.t1.exon2;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . CDS 5521 5617 . + 1 ID=cds.g4001.t1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . exon 5717 6433 . + . ID=g4001.t1.exon3;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . CDS 5717 6433 . + 0 ID=cds.g4001.t1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . exon 6689 7073 . + . ID=g4001.t1.exon4;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . CDS 6689 6748 . + 0 ID=cds.g4001.t1;Parent=g4001.t1 NODE_975_length_15207_cov_41.421 . three_prime_UTR 6749 7073 . + . ID=g4001.t1.utr3p1;Parent=g4001.t1 #PROT g4001.t1 g4001 MSAPGPLVDGSSQSASPPNDARRNLTSVTRIKKSTAEKMFTEDMDRCFLELLLERKEAIRNKNTGVGFWDSLSKQIAERNTRLIREGRMDPPGWPTKQGRQLRDHWDYLVKKWKYALANQGKIGRGKRDLFPFTAEVSEVKGVDCPPFSLSTDAPALAPGLRAPPATQHAASGPHTAGGEESRDEISDIGTNAHNPQHHAAHVPDALPATHHAGAEGTANGGASAKRKRTTAASGAAAAVDVSAPGASASAGADGEVDGAGVERILAYMRKRDRREDKRWKNEAKRRKMDEEKQSESQKQLLDAMGLLVKALEDSAQKHPAVVDKAKDAMASATAR* # PASA_UPDATE: g4000.t1, single gene model update, valid-1, status:[pasa:asmbl_10189,status:12], valid-1 NODE_975_length_15207_cov_41.421 . gene 380 3518 . - . ID=g4000;Name=g4000.t1 NODE_975_length_15207_cov_41.421 . mRNA 380 3518 . - . ID=g4000.t1;Parent=g4000;Name=g4000.t1 NODE_975_length_15207_cov_41.421 . five_prime_UTR 3386 3518 . - . ID=g4000.t1.utr5p1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . exon 3384 3518 . - . ID=g4000.t1.exon1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . CDS 3384 3385 . - 0 ID=cds.g4000.t1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . exon 1707 3180 . - . ID=g4000.t1.exon2;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . CDS 1707 3180 . - 1 ID=cds.g4000.t1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . exon 1048 1157 . - . ID=g4000.t1.exon3;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . CDS 1048 1157 . - 0 ID=cds.g4000.t1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . exon 659 758 . - . ID=g4000.t1.exon4;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . CDS 659 758 . - 1 ID=cds.g4000.t1;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . exon 380 496 . - . ID=g4000.t1.exon5;Parent=g4000.t1 NODE_975_length_15207_cov_41.421 . CDS 380 496 . - 0 ID=cds.g4000.t1;Parent=g4000.t1;3_prime_partial=true #PROT g4000.t1 g4000 MLLARGLVAPRRVLSAHSRAIRSIASDARAHAARSTNAPSMASHVGLFRQPRLPPTLARSPTLSHSAVSVPARHMTTLVRLVVVRLPAYGLGLLGVGAAGANAYDSIRNSFPTLPDMSPYTAMASDLLEDARRWSSEMRDRAAAALAGSGDGPSGPPGGSNMNPLRAAATATTVAARPSEDETPADSNKGVADAKRGSGSDKGKTPATQPDPELERLRAELADMHDAFQRELLEVQNRMQHEIDSLQRENTDLRASYLGLKQKSQSRVAEGSGSIIEMYAEVLDMLSTTDKRFNVHDNLPRVVVVGDQSAGKTSVLEMIAQARIFPRGGGEMMTRSPIQVTLSESPDRRARFSNSDREYDLNREADLADLRSEIEKRMVASVARGATVSRSTVSLSVRGPGLPRMVLVDLPGIIGHITAGMAEDTKSEILDMCKHHMQNPNAIILCVQDGSVDAERSNVADVVNTVDPTGKRTIFVLTKVDLAEQMNANPQKVKRILEGRLFKMNALGYFAVVTGRGGQNEDSIEDIRRYEEEYFRNSKLFRSGALKANQMTTGNLSRAVAREFWKQVRSSVERQSDIIRADLYNKETEWKNSFKGRVMSR # ORIGINAL: g4002.t1 original gene structure, not modified by PASA NODE_975_length_15207_cov_41.421 AUGUSTUS gene 7706 15207 . + . ID=g4002;Name=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS mRNA 7706 15207 . + . ID=g4002.t1;Parent=g4002;Name=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 7706 8266 . + . ID=g4002.t1.exon1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 7706 8266 . + 0 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 8436 9901 . + . ID=g4002.t1.exon2;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 8436 9901 . + 0 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 10196 10347 . + . ID=g4002.t1.exon3;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 10196 10347 . + 1 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 10746 10951 . + . ID=g4002.t1.exon4;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 10746 10951 . + 2 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 11140 11342 . + . ID=g4002.t1.exon5;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 11140 11342 . + 0 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 11746 11911 . + . ID=g4002.t1.exon6;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 11746 11911 . + 1 ID=cds.g4002.t1;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS exon 12227 15207 . + . ID=g4002.t1.exon7;Parent=g4002.t1 NODE_975_length_15207_cov_41.421 AUGUSTUS CDS 12227 15207 . + 0 ID=cds.g4002.t1;Parent=g4002.t1 #PROT g4002.t1 g4002 MGPTTWSHPAVMHSSSLLSTRTSANRNLSLNIASANAFGTGPRTAVQSGTTVSPVSVGGPSRPPGAHPSFLPPTPLSAHSATSPLTSSLNFGKHAQTNASGGYSIPTANSTAAMAQPTAALSGVRVGLGKDAGCAPSSTQALHPLGLFTGCQFAVDFGTELPSREKSRLRKLITDNGGVVSFLITAETTHVVLGPGKENCPKAKSASRMRVPVVAVSFIDDCIAKGQLLSPESHSPEAIIAAALLKTGKIAAPTQSKPQGVERKSDRTTDAAPKPRVYTVGDKGQPEFDEVAYDVLLQAVLVRGATGTKPPEFCAVELHTCTVRNAPEGGGGGKGVDHVAQFRVYTHEGLIANPAAGMRKCRFLASGADAEKVYAAVHADRVSAGFARSFAEFTAVGSARRLVGARGGVAGDGPGAAVSHDVLSLVDGLYAETISHLRNTLGIPPTAISMETVAKAEAVLAAIARVLVSHGTETEPAEQHVAAVEDGEEEGQTVAPSSVAASRAVDVQLQKLSRELYGLLPCKESGIIVDGASLGRMQDICRLIRDMHALDEAGGNFLSSSPEQRYQSLSCTLDPLKITSSQAEAVLALMRGKIELCGVRAKAVYAARRPADEREFRGELGNTHLLCHGTAARNVLGVLSRGLLPPKLSSQIVGVQRTDAGMLGAGIYFSRHPDVSANYASPSSVTGLSYFAVCEVALGRVLDTTSVHSEWTQPPHGCSSTRGVPYSEHASSVFKDEEFAVYDPRQQRLKYIVEFEHATSGAATAVSTSTSTSGSSAFAGLREDIKASGEGDSGLTETDDGSTVDAGHVPDPNAAVVAGLQGADGTAMPLVGVHIRASVVDLLAEVVVMQQFRNTGDQPAEARYVFPLDESCAVCGFEAFIDGRHVIGVVKEKAQARREYKEAIAQGHGAYLMDQESPDVFSVSVGNLPPNADVLIKITYVTELAIEGNDVVFRIPASTSPAIVDAALANLTGVGGTRTKGGAVLSSYNAIREGGELRDTTLTASLEMPFKILSLSSPSHDILVKTTDVLATVEMAAGQRLSGGDFVLLIALAEIHVPRMWVERSDTDGSEACMVAFYPEFEGGVFDGAEGTTMSGTGEEVIVLLDCSASMSGQAVADARGVAMLLVDALVARPHTRFNVIRFGGDHVELFPRPVPCTPDAVAAARSFIVSSRSCLGASDAGKVLSTMAILHAHGTPQRNVVIVTDGLLARPLQTLGHVRAHIDALRVFACAVGPSPDVHFLRQLSSSSGGAFERFDTSTKSRWVRRANAQLRRALHPGLTDVDVRFVFHGDHTKSERVARAPRLPQALFGGMRHVAFALDATNCCQAELRARHGCGWPVSAVVTCADVCITRGRLIHRLAARAIIREWEDGNVDTDASVSDALKKEQTASMIALSVGHSIVTRLTSFVAIEKRDEESEEDAAVRKNTAPSIATLVAGEKRDRLPYMASQVVSRTRTTSALTDTAATLPQLSAEERVEDLLYGASCLREQGDFQSAIRDYRSAASLASELSATHPFRLRAALDLARILMEVDGDVDGAAAIAKTAFDNGISELDSLDESSYQLSTTVMQELRDLLSAATCTYGAPPSPPPLPEAAMHDFIDSYGGIESDEAIPATVIDVGFATVKAGFAGDDAPRSVFSSVIGRPRHKGVMVGMGQKDSYVGDEASAKRGILTMSSPFALPPRQYTAATGEAHAPDAKRKKRAAGRDLPPPQNVSYASNERANDAISLRRHVGAALSDDASPLTAPEAVDSANGRIKMEKGRLLEDESAINAPELFCVTDAKRDADFVSRNRDSKPSRPATEREGERRKDMSRDRRSRKEEAVVEEVMISSPKKSAQKEGSRDFHSSDSNASVSAGPSGGASRDLSSHDALQQQQPLFLGSVRAMNILPPPPPAVQAAFPHPPPPAAAMPP # ORIGINAL: g4138.t1 original gene structure, not modified by PASA NODE_276_length_28454_cov_43.1421 AUGUSTUS gene 25064 28182 . + . ID=g4138;Name=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS mRNA 25064 28182 . + . ID=g4138.t1;Parent=g4138;Name=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 25064 25129 . + . ID=g4138.t1.exon1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 25064 25129 . + 0 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 25304 25371 . + . ID=g4138.t1.exon2;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 25304 25371 . + 0 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 25591 25675 . + . ID=g4138.t1.exon3;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 25591 25675 . + 1 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 25819 25940 . + . ID=g4138.t1.exon4;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 25819 25940 . + 0 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 26207 26301 . + . ID=g4138.t1.exon5;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 26207 26301 . + 1 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 26496 26590 . + . ID=g4138.t1.exon6;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 26496 26590 . + 2 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 26886 26952 . + . ID=g4138.t1.exon7;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 26886 26952 . + 0 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 27261 27469 . + . ID=g4138.t1.exon8;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 27261 27469 . + 2 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 27845 27981 . + . ID=g4138.t1.exon9;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 27845 27981 . + 0 ID=cds.g4138.t1;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 28152 28182 . + . ID=g4138.t1.exon10;Parent=g4138.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 28152 28182 . + 1 ID=cds.g4138.t1;Parent=g4138.t1 #PROT g4138.t1 g4138 MYILGYDEQQSCRELRCISKKTFPDVRVYDSGVQYPKDQLAVDRTGRLIACAVGRNRIDFMQVLPHTKEVISEPATLSLSLAPGDVSIVRAMDFFLVAEHERSDTFRIAAVVHGSTGINAYLILVVLQPDGAMRVVVDRIVYLMRSGDFPFQPESSVRGLMANVLPSSSEGLVLLTVDADVVLLSAYSDSDLVRYGTEFGAILAVAWTSDPTVALATCEGGRILAFDAPGTSGLHVMQVTPSLGRTALSLMGGKFVAFSGWASDGVVVKIPSNTDGRISDDIVVASGDWTYGSVRRLRSGMGTTPIYSSGPLFPGQSSPISHLV* # ORIGINAL: g4133.t1 original gene structure, not modified by PASA NODE_276_length_28454_cov_43.1421 AUGUSTUS gene 9459 9881 . - . ID=g4133;Name=g4133.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS mRNA 9459 9881 . - . ID=g4133.t1;Parent=g4133;Name=g4133.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 9459 9881 . - . ID=g4133.t1.exon1;Parent=g4133.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 9459 9881 . - 0 ID=cds.g4133.t1;Parent=g4133.t1 #PROT g4133.t1 g4133 MVDICQGGQTNQINVLASAINVACALGRSLVEPVMCESSTDPAVYPMHATSEYFDLAAGPSTYLKRCAQAFRAKTNIDDMPTGKAEPNAAIRWVPRIVPLDEFASSYAPEVLNSTSGVPLSVFISRTTVSPPDCDYYSTC* # PASA_UPDATE: g4137.t1, single gene model update, valid-1, status:[pasa:asmbl_4972,status:3], valid-1 # PASA_UPDATE: g4137.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4970,status:12],[pasa:asmbl_4973,status:12], valid-1 NODE_276_length_28454_cov_43.1421 . gene 19871 23684 . - . ID=g4137;Name=g4137.t1 NODE_276_length_28454_cov_43.1421 . mRNA 19871 23684 . - . ID=g4137.t1;Parent=g4137;Name=g4137.t1 NODE_276_length_28454_cov_43.1421 . five_prime_UTR 23527 23684 . - . ID=g4137.t1.utr5p1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 23479 23684 . - . ID=g4137.t1.exon1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 23479 23526 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 23321 23389 . - . ID=g4137.t1.exon2;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 23321 23389 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 23083 23220 . - . ID=g4137.t1.exon3;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 23083 23220 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 22799 22978 . - . ID=g4137.t1.exon4;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 22799 22978 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 22513 22626 . - . ID=g4137.t1.exon5;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 22513 22626 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 22274 22321 . - . ID=g4137.t1.exon6;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 22274 22321 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 21797 22106 . - . ID=g4137.t1.exon7;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 21797 22106 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 21552 21643 . - . ID=g4137.t1.exon8;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 21552 21643 . - 2 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 21303 21426 . - . ID=g4137.t1.exon9;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 21303 21426 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 20966 21093 . - . ID=g4137.t1.exon10;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 20966 21093 . - 2 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 20717 20795 . - . ID=g4137.t1.exon11;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 20717 20795 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 20426 20538 . - . ID=g4137.t1.exon12;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 20426 20538 . - 2 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . exon 19871 20272 . - . ID=g4137.t1.exon13;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . CDS 20183 20272 . - 0 ID=cds.g4137.t1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . three_prime_UTR 19871 20182 . - . ID=g4137.t1.utr3p1;Parent=g4137.t1 NODE_276_length_28454_cov_43.1421 . mRNA 20080 23684 . - . ID=g4137.t1.1.5b6be70b;Parent=g4137;Name=g4137.t1 NODE_276_length_28454_cov_43.1421 . five_prime_UTR 23527 23684 . - . ID=g4137.t1.1.5b6be70b.utr5p1;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 23479 23684 . - . ID=g4137.t1.1.5b6be70b.exon1;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 23479 23526 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 23321 23389 . - . ID=g4137.t1.1.5b6be70b.exon2;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 23321 23389 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 23083 23220 . - . ID=g4137.t1.1.5b6be70b.exon3;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 23083 23220 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 22799 22978 . - . ID=g4137.t1.1.5b6be70b.exon4;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 22799 22978 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 22513 22626 . - . ID=g4137.t1.1.5b6be70b.exon5;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 22513 22626 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 22274 22321 . - . ID=g4137.t1.1.5b6be70b.exon6;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 22274 22321 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 21797 22106 . - . ID=g4137.t1.1.5b6be70b.exon7;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 21797 22106 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 21552 21643 . - . ID=g4137.t1.1.5b6be70b.exon8;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 21552 21643 . - 2 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 21303 21426 . - . ID=g4137.t1.1.5b6be70b.exon9;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 21303 21426 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 20966 21093 . - . ID=g4137.t1.1.5b6be70b.exon10;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 20966 21093 . - 2 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 20426 20795 . - . ID=g4137.t1.1.5b6be70b.exon11;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . CDS 20601 20795 . - 0 ID=cds.g4137.t1.1.5b6be70b;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . exon 20080 20272 . - . ID=g4137.t1.1.5b6be70b.exon12;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . three_prime_UTR 20426 20600 . - . ID=g4137.t1.1.5b6be70b.utr3p1;Parent=g4137.t1.1.5b6be70b NODE_276_length_28454_cov_43.1421 . three_prime_UTR 20080 20272 . - . ID=g4137.t1.1.5b6be70b.utr3p2;Parent=g4137.t1.1.5b6be70b #PROT g4137.t1 g4137 MLPMRAVVRPALVARQIRAPLALGARAYASKAEQYKAVKDTEPNFLECAQFFFQRAADLHTEIKPGHLLHMKSCDTVLRVSFPLEKADGDFELIDGYRAQHSRHRLPVKGGIRYSKEVDLQEVEALAALMTYKCAVVDVPFGGAKGGICIDPSKYTEDQLERITRRFTMELCQKNFIGPGVDVPAPDMGTGGREMAWIKDTYQQFNNRDVDGMACVTGKPLTQGGVRGRTEATGLGVYYGIREFLSYEEVQKQTGLSAGIKGKRYAIQGFGNVGYHSGMFLQGAGGKVVAIGEYNCCIFNEDGIDIEDAYTYFRANKTWKGYTKAKYAEDPLDVLEAECDVLIPAALERQIHKGNAHNIKAKVVGEAANGPCTPAGHDILVKKGVVVIPDLLLNAGGVTVSYFEWLKNLSHVRFGRLNKKWEEHSKTKLVEIIEEQGSRKLSDAERRLIIHGADEKDIVYSGLEDTMVNACMETRITAMQKKCDYRTSALYNAIRKISSVLDESGIMFSK* #PROT g4137.t1.1.5b6be70b g4137 MLPMRAVVRPALVARQIRAPLALGARAYASKAEQYKAVKDTEPNFLECAQFFFQRAADLHTEIKPGHLLHMKSCDTVLRVSFPLEKADGDFELIDGYRAQHSRHRLPVKGGIRYSKEVDLQEVEALAALMTYKCAVVDVPFGGAKGGICIDPSKYTEDQLERITRRFTMELCQKNFIGPGVDVPAPDMGTGGREMAWIKDTYQQFNNRDVDGMACVTGKPLTQGGVRGRTEATGLGVYYGIREFLSYEEVQKQTGLSAGIKGKRYAIQGFGNVGYHSGMFLQGAGGKVVAIGEYNCCIFNEDGIDIEDAYTYFRANKTWKGYTKAKYAEDPLDVLEAECDVLIPAALERQIHKGNAHNIKAKVVGEAANGPCTPAGHDILVKKGVVVIPDLLLNAGGVTVSYFEWLKNLSHVRFGRLNKKWEEHSKTKLVEIIEEQGSRKLSDGEHAWIYMLFFLDIFVSWYFSIFYSARILLCMLRMCPY* # PASA_UPDATE: g4132.t1, single gene model update, valid-1, status:[pasa:asmbl_4968,status:12],[pasa:asmbl_4969,status:12], valid-1 NODE_276_length_28454_cov_43.1421 . gene 5355 8135 . + . ID=g4132;Name=g4132.t1 NODE_276_length_28454_cov_43.1421 . mRNA 5355 8135 . + . ID=g4132.t1;Parent=g4132;Name=g4132.t1 NODE_276_length_28454_cov_43.1421 . five_prime_UTR 5355 5384 . + . ID=g4132.t1.utr5p1;Parent=g4132.t1 NODE_276_length_28454_cov_43.1421 . five_prime_UTR 5708 6041 . + . ID=g4132.t1.utr5p2;Parent=g4132.t1 NODE_276_length_28454_cov_43.1421 . exon 5355 5384 . + . ID=g4132.t1.exon1;Parent=g4132.t1 NODE_276_length_28454_cov_43.1421 . exon 5708 8135 . + . ID=g4132.t1.exon2;Parent=g4132.t1 NODE_276_length_28454_cov_43.1421 . CDS 6042 7853 . + 0 ID=cds.g4132.t1;Parent=g4132.t1 NODE_276_length_28454_cov_43.1421 . three_prime_UTR 7854 8135 . + . ID=g4132.t1.utr3p1;Parent=g4132.t1 #PROT g4132.t1 g4132 MVISTLSSGSVLALGVDFLDRHDSMLVDADIDTEFFNAVEYSLDDLTDSSASSPMDVSGDQASWASAVVADVAVKPATWVSPDFNIPTPPSMSASAAASPGREERESERLSGDLESWTTDLLLNRTNVADECDTEIIEAFPEANMWESVGNYAFSFFPTAPPSPVLIAPISLDDADDLARETMHPTECFKLSSAAADEKPRVLSQTAKAAPTPAATAATAAAAVQAHPGAKGGVSSTAVPTAPTAHTPLAHQPQPPSVSQRMVQQQQHVTQRPHQPRPHQLSAAVAAAAAHAKQGGAMKLPTRPPVPSPKAHTPRPPVPPAHLSHHQRVQATIDSSSIVTRKMDADSEDEEIDVVGLADSAPAPPAGSVAPGSTLTSMRPSAASLDDTNKRKAEGPGSALPAAKRPRVMPGGSSLPIPGIAMPSALARPLGMPLSHAAMGSVGSGGAKGVAAVAVGSASAASVVNANPVRGGRQPSAATLAAVAAAGGSCAAALAAVAAGGSGPMDTKTKRKFHNVLERKRRDDLNRSFQTLQKKIPDIKDSAQVAKVLILHKAVEYIGQLKRAESEIDAARKAASLEKDRLEARMSKLRALKAQQSMSVSVA* # ORIGINAL: g4135.t1 original gene structure, not modified by PASA NODE_276_length_28454_cov_43.1421 AUGUSTUS gene 15512 15784 . - . ID=g4135;Name=g4135.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS mRNA 15512 15784 . - . ID=g4135.t1;Parent=g4135;Name=g4135.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 15512 15784 . - . ID=g4135.t1.exon1;Parent=g4135.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 15512 15784 . - 0 ID=cds.g4135.t1;Parent=g4135.t1 #PROT g4135.t1 g4135 MSDAVSVDSLPGSPSRTRGSPVPFKGPLTPEETAALGDMRDRLVSAGFAKGRIGEDAYIQRFLMARKFNVDRAVDLYKNYTEQASGIPCR* # ORIGINAL: g4136.t1 original gene structure, not modified by PASA NODE_276_length_28454_cov_43.1421 AUGUSTUS gene 16364 17884 . - . ID=g4136;Name=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS mRNA 16364 17884 . - . ID=g4136.t1;Parent=g4136;Name=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 17520 17884 . - . ID=g4136.t1.exon1;Parent=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 17520 17884 . - 0 ID=cds.g4136.t1;Parent=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 17049 17211 . - . ID=g4136.t1.exon2;Parent=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 17049 17211 . - 1 ID=cds.g4136.t1;Parent=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 16364 16585 . - . ID=g4136.t1.exon3;Parent=g4136.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 16364 16585 . - 0 ID=cds.g4136.t1;Parent=g4136.t1 #PROT g4136.t1 g4136 MVRRFLLFDLGLLLVACVPAILLCFTRAFPPQRRGFFLDNAELSYPHLHESVPMVTVAIVSSVVPLFVLFVLEYRLQRQYRANIDLLPDYLATRLIGKTIVFLFGFVLTAVWASWMKLAIGRHRPDFIELCSPTVQRPYPHQYVYENVCANYVYDGYLSFPSGHTAIAFYGMLFAASDVAAGAILGTLMAGVAFWQAQSVDDIDAKQGEQERDPLLGERTRLSTNTEGLSSNTVRVDDTPTQRSRRGVA* # PASA_UPDATE: g4134.t1, single gene model update, valid-1, status:[pasa:asmbl_4971,status:12], valid-1 NODE_276_length_28454_cov_43.1421 . gene 11484 15454 . - . ID=g4134;Name=g4134.t1 NODE_276_length_28454_cov_43.1421 . mRNA 11484 15454 . - . ID=g4134.t1;Parent=g4134;Name=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 14597 15454 . - . ID=g4134.t1.exon1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 14597 15454 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 14047 14406 . - . ID=g4134.t1.exon2;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 14047 14406 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 13729 13917 . - . ID=g4134.t1.exon3;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 13729 13917 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 13444 13551 . - . ID=g4134.t1.exon4;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 13444 13551 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 13177 13273 . - . ID=g4134.t1.exon5;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 13177 13273 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 12776 12945 . - . ID=g4134.t1.exon6;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 12776 12945 . - 2 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 12401 12544 . - . ID=g4134.t1.exon7;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 12401 12544 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 12087 12180 . - . ID=g4134.t1.exon8;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 12087 12180 . - 0 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . exon 11484 11869 . - . ID=g4134.t1.exon9;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . CDS 11505 11869 . - 2 ID=cds.g4134.t1;Parent=g4134.t1 NODE_276_length_28454_cov_43.1421 . three_prime_UTR 11484 11504 . - . ID=g4134.t1.utr3p1;Parent=g4134.t1 #PROT g4134.t1 g4134 MQKIDFSQFGNVQLEMVDVVDTFREGKLVLLGTRARDDAAILLFTARLHANAASYNATVALAVYLLSVASGDLETQRSGITFIVDMAGAGWRNFDLGLQNHLLSMIQNNFPARLKRVLIVNPPWWISLIMKAAVPFMKPKLAAKIQVVDLDGIIEHCPPSSLPVDLGGELTIDIDKFISERAVAETQRKSLPVMEGYLSKTGPGGKGWKRRYFVLRNSELAYHEDSDSRVPIRSVPLYAITAIEPDTASGKEHAFKIVTQTRTFLVRADTRKEMDGWIAVIRSRRPSLRGDDHPDTNALQLPSGASSRRTSMDPQRASDSASIGGSGATAAAAAAAAAVSTAAAPASSSGSGRDKKAGTAEAERLEFERKAKEERFEKQNAKRTNIVKELLATEQSYVDNLTMILEVFLKPLRAAVDAGKPIISNTEIKKMFPEMESIAAFNLQLKTELSARVKDWSPRQKVGDVFVKLIVYLKMYTFFVNNYPIAVETVTRLQNENATFKQFVKEAQSKPECRMIGLAEHLLTPIQRVPRYVLLLEDLKKNTDTTHPDFNDIVTALEKMKEVANYINEAKREAELRLKVVAIQDSVKQMPESFVLVEPQRRFIAETDFVELEEGQGKDTGKFHPRRQVRSFLFNDLILVAKRKEKSKTHVFYKYMHKADLETVIVADAPGVGDSVFQILYTSDNLRRQTLQAASPAAKQEFLAGVESLKATEPTLLRRSQLEEKDRERERERKSMGLMPPVDDVTKTRAGSDVSIRESGERSPGGGSTPVSPSTASSVRSSVASTSASSAAPI* # ORIGINAL: g4131.t1 original gene structure, not modified by PASA NODE_276_length_28454_cov_43.1421 AUGUSTUS gene 2136 4298 . + . ID=g4131;Name=g4131.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS mRNA 2136 4298 . + . ID=g4131.t1;Parent=g4131;Name=g4131.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS exon 2136 4298 . + . ID=g4131.t1.exon1;Parent=g4131.t1 NODE_276_length_28454_cov_43.1421 AUGUSTUS CDS 2136 4298 . + 0 ID=cds.g4131.t1;Parent=g4131.t1 #PROT g4131.t1 g4131 MLVVMFADIAATKVRALVSPEDSTQAAALEADTTTPALLATVESPIASLGPKPSDPLVVVVLPKEQGAGETPLAESAQDSHPPSAVAEALTDTRHSPIVETAAPTAGPITAPPPSDAHRGPPATQVSDSSSASSAGPPPSRSKQPHGASHYRDADDQSRHQLQYGPQHHGHMVKDMHRPPMHMQQQSYGVPPGMPHPIVGHPYHRNPYAPSVGGPVIGGQVAYGMPSHPHLHGPQVPNAAGGMIPTHGASYPAYENKPSAPACVNCQRSHLACDRKVPCGRCVAKNKESTCAPAVYKKRGWQLGRRRTSLLRERMQPHFGGMFYGGVPFGMEPMMGGPMQMHPGHHMGGPYAPGGFADPMMLPPPPDLGYGQYPDSNAVHALSLDGDFLHASPVFCNMLGYSEAELVGSNVAEILHPSDVPMVMNELHAAPMDEGGRRFRCRLRPNHTDAFLPVEISGRAYMGDPSNDGTYFVGTARPVDQYAMEPYASGQMHRPPMHGGLPPPGMHGRHAVPGIPGIPGSQPGSPRFNAKCGPDGTCVELSPNVRYVLGFGQTEAMGLWGCQMVHGDDLWRVATFHDQMVAAGHGASGAMSCRMRTKAGDFVEIDFQSQTVGEGPGLFVSYDVGLRDVSRPPVHAPPQSAQYGVRGVQADAGQEMGLAVRRTMKARNGGDNNQGSPAYGGVPGGQGPQPRGYPGTQPGDALSYGRSMGLPPQPQQQQRQ* # PASA_UPDATE: g7507.t1, single gene model update, valid-1, status:[pasa:asmbl_7944,status:12], valid-1 NODE_5229_length_960_cov_77.791 . gene 72 952 . - . ID=g7507;Name=g7507.t1 NODE_5229_length_960_cov_77.791 . mRNA 72 952 . - . ID=g7507.t1;Parent=g7507;Name=g7507.t1 NODE_5229_length_960_cov_77.791 . five_prime_UTR 920 952 . - . ID=g7507.t1.utr5p1;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . exon 755 952 . - . ID=g7507.t1.exon1;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . CDS 755 919 . - 0 ID=cds.g7507.t1;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . exon 387 536 . - . ID=g7507.t1.exon2;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . CDS 387 536 . - 0 ID=cds.g7507.t1;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . exon 72 226 . - . ID=g7507.t1.exon3;Parent=g7507.t1 NODE_5229_length_960_cov_77.791 . CDS 72 226 . - 0 ID=cds.g7507.t1;Parent=g7507.t1;3_prime_partial=true #PROT g7507.t1 g7507 MLNTDLHNPSVKNKMTKDGFIRNNRGINDGKDLPREFLEALYDGIRNEEIKKPADEEEGSDLWYVTFFNPEREGWLTKQGGRQKNWKRRWFRLTNNCLYYFKNPEDTQPIGIIPLENLGVRDVSAKYKKPYLFEIFSPSNTKIKACKTTSNGTLVE # PASA_UPDATE: g4210.t1, single gene model update, valid-1, status:[pasa:asmbl_7526,status:12], valid-1 NODE_4682_length_1335_cov_31.4127 . gene 184 1289 . + . ID=g4210;Name=g4210.t1 NODE_4682_length_1335_cov_31.4127 . mRNA 184 1289 . + . ID=g4210.t1;Parent=g4210;Name=g4210.t1 NODE_4682_length_1335_cov_31.4127 . five_prime_UTR 184 185 . + . ID=g4210.t1.utr5p1;Parent=g4210.t1 NODE_4682_length_1335_cov_31.4127 . exon 184 266 . + . ID=g4210.t1.exon1;Parent=g4210.t1 NODE_4682_length_1335_cov_31.4127 . CDS 186 266 . + 0 ID=cds.g4210.t1;Parent=g4210.t1;5_prime_partial=true NODE_4682_length_1335_cov_31.4127 . exon 520 612 . + . ID=g4210.t1.exon2;Parent=g4210.t1 NODE_4682_length_1335_cov_31.4127 . CDS 520 612 . + 0 ID=cds.g4210.t1;Parent=g4210.t1 NODE_4682_length_1335_cov_31.4127 . exon 1079 1289 . + . ID=g4210.t1.exon3;Parent=g4210.t1 NODE_4682_length_1335_cov_31.4127 . CDS 1079 1289 . + 0 ID=cds.g4210.t1;Parent=g4210.t1;3_prime_partial=true #PROT g4210.t1 g4210 NQHARPVAFKVKTTSPDKFCVRPNSGVVAPGQSAEVAIHVMSTSRVTVGVSADKFLLQTVLLPEGFSGDMAQLWKGGSGHNSPLIHDQRITCHFVNADGSGRVSVSDAHGHSPASAVGADAIVRGSDG # ORIGINAL: g11426.t1 original gene structure, not modified by PASA NODE_1325_length_12100_cov_36.3225 AUGUSTUS gene 1086 4692 . + . ID=g11426;Name=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS mRNA 1086 4692 . + . ID=g11426.t1;Parent=g11426;Name=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 1086 1220 . + . ID=g11426.t1.exon1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 1086 1220 . + 0 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 1323 1430 . + . ID=g11426.t1.exon2;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 1323 1430 . + 0 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 1621 1958 . + . ID=g11426.t1.exon3;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 1621 1958 . + 0 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 2636 2825 . + . ID=g11426.t1.exon4;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 2636 2825 . + 1 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 3074 3489 . + . ID=g11426.t1.exon5;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 3074 3489 . + 0 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 3678 4100 . + . ID=g11426.t1.exon6;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 3678 4100 . + 1 ID=cds.g11426.t1;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 4200 4692 . + . ID=g11426.t1.exon7;Parent=g11426.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 4200 4692 . + 1 ID=cds.g11426.t1;Parent=g11426.t1 #PROT g11426.t1 g11426 MGIDMHEHPAATAETATSAICELAAQLAALGADGKMITQKDFAAACDGVLAAHGHTALWEFLFRFEMACGYIVAARLALDVALPPFVSNERPGVKIRVTINRSKPEIIAPPKPPEPSSTVSASHNTHARDTQQPTASPSSCQPPSLTLSVTSPPPDVAMLPNGAPCAICYGHVGVKQGLRAYEFDLRGRPHFIQCPPYPYFGHHMVVVDRLHEPQQLDDSTIDDLAAFAVKFTGTTILCNTDRHGTGCSILAHRHYQAGTEDLPIFSANPLHSSQVPSGADNNSSGHVSFALNGASVYPLDYPCPAVRVSASCMDVAKEAAKHIASSWRTGVEHLGFDSNLTTYGLVARVTNCGDGGAENRCDVFVIPRYAEESRRTPSSLLCLKTEFVGIVEMCGYAILPGRLVEQLDAIVAAVTSTLTDLPYQHSTAEGAVTRPCITVANAVLDRIAQSESLCAFKGFVGQYVVDCLLQRGFLSLLAPTTSCNGNPLCPPVREGVKAAIDDAVSAAFVEIMHSNGAFDIGSGRVMSVSGWRTVVGGRLIGYANHVGSEGPSLWSPAQRETAASTPIRKYPPTVTFSSSGSAVVPWLELEAYGNFSAATTEVQCMRCGGGPGTCEGEIRCPTAWNVCPTMSTTVGSAGLSLFGLDSDDAYYVFRVRTKHCGKWIRRTVVAHVRPIRTVSGCSWHLWQSITVRRCEMALD* # ORIGINAL: g11425.t1 original gene structure, not modified by PASA NODE_1325_length_12100_cov_36.3225 AUGUSTUS gene 210 631 . - . ID=g11425;Name=g11425.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS mRNA 210 631 . - . ID=g11425.t1;Parent=g11425;Name=g11425.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 500 631 . - . ID=g11425.t1.exon1;Parent=g11425.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 500 631 . - 0 ID=cds.g11425.t1;Parent=g11425.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS exon 210 343 . - . ID=g11425.t1.exon2;Parent=g11425.t1 NODE_1325_length_12100_cov_36.3225 AUGUSTUS CDS 210 343 . - 0 ID=cds.g11425.t1;Parent=g11425.t1 #PROT g11425.t1 g11425 MAHNAAAHGRLPAFAVCLLVCAALAASLTAAWAVDPAGVKKVHVIFSNHLDVGFDGIDPTLGYARNVVNRYFSTYFPKAIATAEAMRQ # PASA_UPDATE: g11427.t1, single gene model update, valid-1, status:[pasa:asmbl_1212,status:12], valid-1 NODE_1325_length_12100_cov_36.3225 . gene 6422 9394 . + . ID=g11427;Name=g11427.t1 NODE_1325_length_12100_cov_36.3225 . mRNA 6422 9394 . + . ID=g11427.t1;Parent=g11427;Name=g11427.t1 NODE_1325_length_12100_cov_36.3225 . five_prime_UTR 6422 6465 . + . ID=g11427.t1.utr5p1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . exon 6422 6574 . + . ID=g11427.t1.exon1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . CDS 6466 6574 . + 0 ID=cds.g11427.t1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . exon 6815 6913 . + . ID=g11427.t1.exon2;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . CDS 6815 6913 . + 2 ID=cds.g11427.t1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . exon 7488 7556 . + . ID=g11427.t1.exon3;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . CDS 7488 7556 . + 2 ID=cds.g11427.t1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . exon 8141 8278 . + . ID=g11427.t1.exon4;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . CDS 8141 8278 . + 2 ID=cds.g11427.t1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . exon 8676 9394 . + . ID=g11427.t1.exon5;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . CDS 8676 8824 . + 2 ID=cds.g11427.t1;Parent=g11427.t1 NODE_1325_length_12100_cov_36.3225 . three_prime_UTR 8825 9394 . + . ID=g11427.t1.utr3p1;Parent=g11427.t1 #PROT g11427.t1 g11427 MFTSVETLKRKQGANGSERFNYLRALVTEFQDTSDEAAKEQILANLANFGYDPINYEHFRKLNIVDLFLDMLTETGPRLVAFGVCGLCNVALDPRNRSVILANDGVSLLVNCLSSTDEETVIDAITALIFLITAESKSEIGSPQVVDAMERYAKSKNVRIANVARLFLEQVVGPDGGGGKHMGRAPS* # ORIGINAL: g2547.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 8025 8408 . + . ID=g2547;Name=g2547.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 8025 8408 . + . ID=g2547.t1;Parent=g2547;Name=g2547.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 8025 8408 . + . ID=g2547.t1.exon1;Parent=g2547.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 8025 8408 . + 0 ID=cds.g2547.t1;Parent=g2547.t1 #PROT g2547.t1 g2547 MCPRVTDVSALNGVHHLDLSGCTGVTDVSTLGGVHHLVLSWCTGVTDVSTLGGVHHLDLSDCTEVTDVSALGGVHYLDLSYCIGVTDVSALGGVHHLDLSDCTEVTDVSALGGVHHLVLSDGNVRIR* # ORIGINAL: g2550.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 21392 21880 . - . ID=g2550;Name=g2550.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 21392 21880 . - . ID=g2550.t1;Parent=g2550;Name=g2550.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 21392 21880 . - . ID=g2550.t1.exon1;Parent=g2550.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 21392 21880 . - 0 ID=cds.g2550.t1;Parent=g2550.t1 #PROT g2550.t1 g2550 MDVRVLHTHLLAQGIEATRAKYNLDAKDPMDTAWEMSGHCMIQSSEDARATPVMLTHVARSPQLSTTASLPFASGLLDPLAGSRSKRAARHAIAAEATTTTATNTLAAPIVDVRAILIDCMRKTLKRRRRRPLQYRVRSPLVQETHQVDARHDVLDPCLVAA* # ORIGINAL: g2549.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 16606 19143 . + . ID=g2549;Name=g2549.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 16606 19143 . + . ID=g2549.t1;Parent=g2549;Name=g2549.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 16606 19143 . + . ID=g2549.t1.exon1;Parent=g2549.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 16606 19143 . + 0 ID=cds.g2549.t1;Parent=g2549.t1 #PROT g2549.t1 g2549 MSEVKNEAPVQPIQPTQTTGLTTDITKQLLGTVLSTRMIQDIGSIFSSSTGGTSLSVKNIAQLLLLMSLDEIKVIISSAITAVKTYVVAHGVKFLSIASIGVFFQFIRKALVWMFRQLTLQWLYARIRPAVVPDLQMIAINSNDESDAEVRFEPTVPLMQAMVVFIKNNPEACEVTISNKSGVKVMNLDESVLTETWDRVRIKYNDCIIRFNAQLCMTFMRKQGHDAVLQNWSVIPPSSNIRRFSDLLPESTIRTFIRSTIDRFTDKTRPYKVQIPGMPHDVYTYDPTLKVTSNVTAELALVYAHVRNFPTMDINISHYEYALLQNLYSKYGFGHVMTLCTYRLFGHTIFITDDESKTILEVSSRSHYLYGKFETAFANLNIAYPTLTANELEMYKDGFVMNGSAKTKNDIIPVHITSQEPLTPIEMSQRFDAFISHLGSCDFSATGKTVKIFNVKISRKENEVEIPNPAFKEWKARTSNKDDTTEVHEQVEEDGDKNGGTGEKKKKSRKKRGGAWSWGGGSFYDPPPASTIIKTEVTKSVIVELVNEKSKPLNTLYMRKNDMFKLKNCVESFANRQELLSNLGLPNKLGILLYGKPGTGKSSAILAVATHMKKDIYYVHLNCVQSNDELQMIFDHVNKQCLNGGIIIFEDIDAMTTVVHKRSSSPIDSSYTDVGSVVGSVAGSALGSTVGSTTGSTTSPVGSIIGSNVGSSASSEKSVSLVDLLNQQDSQLTLEYFLNVLQGSLTQDGTIFIATTNHLENLDPAFYRDGRFDVRIEMKMCDRFQINTIYSQLMMRPIPNHLLERIPEDKYTPANIIFHIKPYMFGDYTDEEVLAPFISASINDT* # ORIGINAL: g2554.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 29415 31112 . - . ID=g2554;Name=g2554.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 29415 31112 . - . ID=g2554.t1;Parent=g2554;Name=g2554.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 29415 31112 . - . ID=g2554.t1.exon1;Parent=g2554.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 29415 31112 . - 0 ID=cds.g2554.t1;Parent=g2554.t1 #PROT g2554.t1 g2554 MGFSLICMAICAAHMFTATETPFYGPGTYTFVSLASMMSTEDMRADYMTDNSNRGSPHGIPVLPEFEATPYAGPVTDPFWISLASMGLGTNYLIAGTHLAWSEATNMCSGPYRGTMNSILASNPGPPTSQLLVYYLDYTHDAANPTCVELNVPSVYMRDAVIVCTPEPDVVTSFLVSCAVVDFGVAKVKDYSMVNPDDDENYCPMPIVARFKTSIGVANGAGTKFWTPPPYVHSFNNMLSPIPRMEPLRGINARFRDVALSGVLYPFVMPNVRYPPRREFVSLDVNSADAQYGNDLYIGTYRSYYRAEGDLPEVTLATHDVAINKTQTRLFMRALTPSNPLQYINEDDPLPFVPHAASSSSSSSSSYSSSSSSSSSSSSSSTVPAALPVASVPPAPEPTVRASRSLQTDMPQPAASAPASTMPAPQDAVPVPVPEDAGVCTRTHTVQTTSTATTTSTVLSTSTHFATSTLVATSLEWVTSTITVTRYTTARADATPAACAPAAAALTPMQPLPPIDLPDVAVTAWISVPGVLAGMVLLLGAYGLYMGRRSLRPPSYIQSSHSYRK* # ORIGINAL: g2555.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 31613 32344 . - . ID=g2555;Name=g2555.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 31613 32344 . - . ID=g2555.t1;Parent=g2555;Name=g2555.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 31613 32344 . - . ID=g2555.t1.exon1;Parent=g2555.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 31613 32344 . - 0 ID=cds.g2555.t1;Parent=g2555.t1 #PROT g2555.t1 g2555 MLCIGYAQASNVLPGAIEEPPMLPQDGAPPGLPAGPGANGNAAPDAPGAPAEPFPSATPTAAASSAASSTAAAAATTNTTFISHMGLTPEDIAMLDDLDRAWDSIDASSNDQTQYIHALLDIVRSPTNTSAAKDVMPDPTHAPDPDVSPAPSPTAAPDIPLPPPPPPLHYRLPRSMAIGAVLSSVGVGMCLVGLYSWYGRRRQFLGVTANMYYEQIVTRIHTSMRNDSRSPQDHQGYGTDVEL* # ORIGINAL: g2546.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 5760 7013 . + . ID=g2546;Name=g2546.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 5760 7013 . + . ID=g2546.t1;Parent=g2546;Name=g2546.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 5760 7013 . + . ID=g2546.t1.exon1;Parent=g2546.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 5760 7013 . + 0 ID=cds.g2546.t1;Parent=g2546.t1 #PROT g2546.t1 g2546 MRDFLMEDQPIAGQKYACISIPLHTVDNEVVPAGIMVSKCYSTVEELNANELKTFTKTGYNVYTVEVGKWIPFHFDKQERAKNNKNLDKLNKVMRSYLYNCIKDREAEEKRQANMKNAKSAIISVQTDQTEAGETDESGGSEETSAPTAQLVTDSAFPGDIIELRPPANADKGKGADKGSEVSPTGPVLLKNPKGNNSTGHVLLSFLTPNPSIDKSLAGIKVRGYELTEDAARERAKDLRDKDRDFHVEVGLANTLLPFDPQDEAVEDVQYHDKELNNIMHGIEATENAAKKITDEMRSENAQSELQKMILEDIQKDDVVRDHCSNGDGASGQGAVAAEVGEVGEVGEVGEVGEVGEVGEVGEAGEAGEADQVGEAGEAGEAGEADQVEAGEALCQTQTTAAPAKPKRSRNKRHGRR* # ORIGINAL: g2557.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 39128 42400 . + . ID=g2557;Name=g2557.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 39128 42400 . + . ID=g2557.t1;Parent=g2557;Name=g2557.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 39128 42400 . + . ID=g2557.t1.exon1;Parent=g2557.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 39128 42400 . + 0 ID=cds.g2557.t1;Parent=g2557.t1 #PROT g2557.t1 g2557 MRKPITTPSGATNEAQLALAMLLLRDVTNECTLHFRMFNLTGAVLDMVHGLGADISSASAPGRAPTPVRLECARREPPVARPSGQIANRAVFLAMLQNERAEEMLPDETTLSKRQPLMCKWFATLDDMDTNRARQFGARYLAFCDKTCGIVLQPTAEFLGDKLAAEFDASPVCGLFEALALQGRAAASAAGIAPSAVGAVGTQSQARRKSISFSEAVAAATQLARSERRMSTAVNVDEEAAEVRDEKEKRRSRAACVPTICLVSANANNTCPACNKTVARNDHVRQCITCPEVVCNACMGYKDPRIHRDKAVAHLCLACYNKVLSVRDLNAIETEDPARASGTSKRLPKYVQTTREWEKSHPCIQHVIRAPSLAEAPAVPAGYEPPQPRPPWKCTTCSVLITTGRDPTYCKGCRIETCSNCANMLADATPCANPTLCLECRHTAESIRIIQEFTGGAARRYAASIAAEEWDARAANAKTAHANAGGGGGPVALYFHVPFNPLALIRCMALEWMRPYVAAVAEQKAAANAWPSISPSTFGQYTAKAVTHFRAYIATLVHGHGPYTCVLPPGGLESACEIVPRATASASAALTSAALTSAALTSAALTSASASASAVQYGPFAAPAAGQANAVACVGGTCDIMRTLHTGDLVTVIQAVNGKQTAVHGIYVDPTGQDAEVLHDRPALVLSRRARQLCKLDPRTEPNVIVVGNLTQLAEAVQKNAPMTALVRGRLCMLQGTPTTLQRCESAQARAAMPLNVRRMLVSILARSSARDAIRKTYASRGVARPLALAHANEQILAQEQKWASRSPTMCGPCAKAGGAHATHPECATSTRLTTGKDHVLRHGTMVTYTLVTPTSSVTNVRGVFMEADAIPALAGHLARLGGKKFNVVHVAAIGTLPEPYNVVGQVHEGSLRLGWFAPDGRNVSDEMLAQIKSRTVGGAAKFVCDHELAYVAALHQTLHRGEPGAVAAVQVTRYMQEGSRLVPKAVSEVCVLTPRNGIMMAVSPFRHTHRSLTNKTVELKELANHKAGSEIVGDGRVLGVLLPHDKSDPRMRTLAENITNLSILCARDLAHLVGKNEGTIDIKTFVSAQ* # ORIGINAL: g2552.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 23367 28313 . - . ID=g2552;Name=g2552.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 23367 28313 . - . ID=g2552.t1;Parent=g2552;Name=g2552.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 23367 28313 . - . ID=g2552.t1.exon1;Parent=g2552.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 23367 28313 . - 0 ID=cds.g2552.t1;Parent=g2552.t1 #PROT g2552.t1 g2552 MASDVIMIESDRSDSTNDSDLMAHMPMPTADTPNGHGTTAAAVAASAATTAAAKGKSAANGAAAAATADDDDDDTAESAFQQILDADPTEMNKLVASIAKLAAEPRDLPMEVPGGIELDSAALAKFHNSQIIKFDSGISNKGYPYKAVINGLTMSIISGPMERNNAHFLMSDLVVGWVKVHTPRFVALFLEYCAGANFFSFLQVADYAARMTRIMSPFNAKTAVAMKPYQSVTIVFANHAFLDHMIDAPKSMYAKTLMVACQICPPSNGTVEFTKHTLALLRGIKDKTVDVSTIPPAQLAIANGLGGILRELLGKLPAPTTVRSIPPGPAHEAAMKALHLSRKDLPEDVRPALDVKMHTNLFINALYQMEIESEMATHGKKLLESAARSVMILLNAGVHGQTVDASIVFEIMGLDSSKYCRNHVRLCNPISYAWMTLYWFATRAVAAAARPHAPFADLVKLITTCYDMYLRNYVDDAEPLALLHCVIVYYRLHAKDYTEAEIRPLEVKPCSLPAWLNDFYDKPVRYGDFEQFKSRRVLGMPDDYFGGTAAVSGNNKTPVSPHEKSFAKFAEARGLDPETAASVASAASAHGKKMSEADLKARLATEAAKGVRPMAPSKFSDAAYYKAIEERIKNNSAQWHTRNTPYLNMCIRGLTELDKKDGSSRITSLLLLTTDVNDVLDMTTLGEEAVARDLELGAMGKKRRGDGGKKSPGTADAANGDANETGDPNAADNGGAAAAAADVDSDADDGEFDADILKMAKVSKDKRKSSRKSRKAKSKGGKKRKSKSSKSTRKSKKRKRSSDSDSSDDDSSSSSSSSSSSSSSSSSSSSSDSSASEASADSSSESESEDASAAAAAAANAEAATAKQTTPSKTTPKKKPTKSTETPAMIKTPANDDDDEDDDDKGQAAKKTKGTKAAAAAAAEEAAAAAAAAKAKEEAAAAAASAAVAAAKAKKEAAAEAKAKAAADAQAAKEAEATKAAERREKERMRKQKARDDAKAARLAAAAAAEAAEATAAAESAATAAATAAADTADTADAADTTDKQAHTTPPPRRAKVTAAAAILTPTSKAPSHATTTNTTTTTTTGTTGNGNGNSNNNSNSNSNKRKRGTPKSQAKTTPKFASSAAANAMEVDGQERHSDGAQSSDDEDGSDEDARAAGTHGTARNTSTATNSHSRGSNGVRASESPATTQSAKRARLAAHAVSVAIATGIDRDAFAAKAAAGEIGTVGSDPFRSTLRYDDDDDMQVTPQQNTHNQQNQNQHASAMPAGSASFTLNGPPIPPMAGMLMCESPYAARIPPDQIVWFKLQTGVTPACAEIEHFVSAVGPNTVYLPRDKGSHALSTATSNGITTLVGRIGDRFLVCPRIDDTTSSAMTADLITRYVRRCQLMQAMGFYSVAIPAVHAVTPTNYGEDELVETRYVAAFRPTGATSSMQWMNVAREYSGVRYTISDLASVGYISAQQLVDAGFLDLFHKNGFNVLKFLCMAYMLNVDIGNLANVYLHGSYGVVALDIFTENGTVETEAERQWLAAKISAQRKGKADAKKTPATKARNSFGGLPEAGSPAESAADPSAWALKLCAAGVLFSKPLTERSRAACMAAMHLWRPMTASWLASVDIAALTAPVSKGLGAAVMARFATRHELLTKAFAG* # ORIGINAL: g2545.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 1986 2964 . + . ID=g2545;Name=g2545.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 1986 2964 . + . ID=g2545.t1;Parent=g2545;Name=g2545.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 1986 2728 . + . ID=g2545.t1.exon1;Parent=g2545.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 1986 2728 . + 0 ID=cds.g2545.t1;Parent=g2545.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 2880 2964 . + . ID=g2545.t1.exon2;Parent=g2545.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 2880 2964 . + 1 ID=cds.g2545.t1;Parent=g2545.t1 #PROT g2545.t1 g2545 METSAIRECERCEEGAAFCAKVNKIIETRPQHWENIVAGCEIKKGSLRELAPCKHAASLFAYQLAFGMYDTEVKACRVIAMELLRWLRDHTEADFERAYTNEELERLDTEFGRKAAATVTRLACAADYVRISFYDPTENISFIRHLVMAFARMFDHRYIPFGRVVDNHLFLCKGNERCSKHDPLLVSTANLRRGCGGGTWDQPSIIEDRPALIYSLVQEARAAYFKKTCVPDLVERNSNEDRPKNIKTPESSESSESSESSKSSKSSKSSNISLC* # ORIGINAL: g2548.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 15002 16195 . + . ID=g2548;Name=g2548.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 15002 16195 . + . ID=g2548.t1;Parent=g2548;Name=g2548.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 15002 16195 . + . ID=g2548.t1.exon1;Parent=g2548.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 15002 16195 . + 0 ID=cds.g2548.t1;Parent=g2548.t1 #PROT g2548.t1 g2548 MWNKDVTPSEVQVYKTMFEKMKADAQVEMQDTETATVKRSAMVPVRLVVENPNTSTTLNCPTESEMCARFYNFVGDLGATPAADVDAADEFKAKVFSVSIKRTVVEKTTTANKDFEQFEDQMAILRSSEIDEKELVKMAKKAPPRTVTIEKTQSEVTVDFINEKSKPLSTLYIRKIDMLRLKSTLESFAHRKDALVRLGLPNKLGVLFYGLPGTGKTSAILAIATHLRKNIYYVHLNTIQSNEELQKIFDHVNKNCVNGGIIVFEDVDAMTDVVHKRTEEKRQNTQFTLEYFLNLLQGSLTQEGSIFVATTNHLDQLDPAFYRDGRFDVRIELQKCDHYQLQTMYQQLMGRSIPEHILSKIPENTYTPATFIFGIRTYMFGDYSDDEILSMFIQNAT* # ORIGINAL: g2551.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 22687 23156 . + . ID=g2551;Name=g2551.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 22687 23156 . + . ID=g2551.t1;Parent=g2551;Name=g2551.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 22687 22689 . + . ID=g2551.t1.exon1;Parent=g2551.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 22687 22689 . + 0 ID=cds.g2551.t1;Parent=g2551.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 22809 23156 . + . ID=g2551.t1.exon2;Parent=g2551.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 22809 23156 . + 0 ID=cds.g2551.t1;Parent=g2551.t1 #PROT g2551.t1 g2551 MQATNALTFLNCAKCGEATCDAETDICSECKSANQKRLDVLFPANGSASAAPTVATAATAVTAESCNTMQRQAMPVPSTVVSDAAVNTDDKEDEQLIERHRNMHDRFSRIPVPDTM* # ORIGINAL: g2556.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 32619 39023 . + . ID=g2556;Name=g2556.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 32619 39023 . + . ID=g2556.t1;Parent=g2556;Name=g2556.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 32619 39023 . + . ID=g2556.t1.exon1;Parent=g2556.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 32619 39023 . + 0 ID=cds.g2556.t1;Parent=g2556.t1 #PROT g2556.t1 g2556 MAFASTAAMLADIHAKDADLGEWYAQLHATVHHRGAATMPSVCEKQLTELANSLKERSRDIKMALKQIPASVEMANREAAELMVRAHSGSSSEAQMLAQQRLNAIPAAYVAECSELKKRAEILRRLAADVAQMLGKPETGSASERESRLYGGMTADEKKEEDTLNKQIGEKLDALAFPLRLTFKDADGKTNVMSDETVYDAFKKCMTTLYAQLQEEPAHLSSVPTVETLRTLNAKLTAAKSGSLLCANTRKVPTSVECESMEIFRKTQPYYSSYLKELYERRTIDHPKGPKHKVDDKVRLYWARLYVEILTVLQTYSTMADDKRATARTDVIKTIGDISAAGVQIAGSKEARAKGKSASAEARFHGGITAEEKDEEAKLNAKLDAMERTEYFPLYTTLNPPKMTEDAKKQAVTDEAVYTRIQAFTDVMRDHLKNGPTHLANAPAVVTSLQALVKKLEAKQGDKPCESIYWKKEFRSEQERQCYLASQKYALECMLAFGRSRKIDPAKVGGKVDDKVRLAWTRIYAQIRDVLGMYSKLPDTARPGIVPTIMQEMDAIQAAGTAMPDPKGARNKGKSTPAEARFYGAASMSESEKTANERIDNAMATLFFPLNITKTMRRTGSDSDSGSDSDASSGSDSGSDSGSDDETRVRTDADVYKAIQKLTTTMHAHLSNGPANLAASAPGVTEALQKLGADLRAKGGAYLSGNKPCISNEQIPSDLKDNAGALAQQRLSVDLQTTFMGLFKTKRELKTSKPSSKVRVAWASIFEQLLYVLQAYSTMPDAARKPWAAFTVQEINKIIAIGVQKYGADELRKKSGSVGAEADDADTERILQEHLEAIHYNTDGAGVASCRQIVYAMTMLATQFTKNPAVLARVTALYKKLITTTQWQQAVNDPHIRTLRKHISNSKANETLFAIQPSPPFTNSEENAIRDAFDAIDQTNFGELVWVNPLLVMTDQCPHSTDKEWRKCARRVFNVMCMALLMPRMENGFSGLPRLNVDDATRSNAEKMQKLTTSAKTVLALNGHIQGFANDLHAHARSFVRKSTAMNTLRRNVKHTVDAVGTVMADPRQKALKNSSATTRHIAEVWRLDQVKARPARSASSASSFSDDSSSSDDSSSSDDSSSSSSSSSSSSSSSSSSASHVEWKPSTWYVYMLPKGDDGDKRTERLRDLLDAVGKLHASARDACKYYLAVYLRVSLHTLCNVLEALQQTDQFKELSPIPDNAHSPPTESPIKKAVRSNPPPLSHDDLSLCKTICETPAGLNAETPSSMPSRKLKWGTFLLRIENICTTLYDASGTLLETDREYKMYAFISDLIRMFANANNNSRDLARDVDICRNVAPIDFARFDAPSKYFVPEAVQEYFEAAKCTFAQKLRDGCAQWTAPQPGSPAAQARGRLHAGAEPGETATKPAKGMTGIMNKFFGTPQKIKPLTPEEEAALLGEFRTFTGDSSKPDAYLFTTAKMMNMFLACAVADLAKEPKAKIFVRANELLDAYMNTSWRALEQECTDPIVAKNRVVNTYNTEYLSAATHDVMAAKMPNTLSAKKITDITGHWSAFRNKILTIMRALQQLDTATLTKRKTKDGTSTVKKLLDTWEATMQKVSALAPVVEMKLADPPPEPPAPAPRTNVDKVLANRPIAQPRSMGKVPPSETRPVPTLIANPDSDSDVDRAVGARGAAPFADYTEVQYVLKGADGPVTGYYVGGELRRARRERIAGDASRVKFNVVHDRPLDHLAFPLNMCAWIEPNMLQSVDTTKVNRGDASVPVQWIPHGGMPPPAYTRQQYVHDVTRALYEGTWPAAAHEMDGKHAPLHGSYVVFTSGVAERAPSTTTYGVYYDPATAKYARPERLRFLQTLVPDVRHAPEFDALYNVLLLRPNANAELPFRYMESVDPQNVHVAPGWIHPVTAQNMAFALQDAVRQWETAVYKKTVQAADLKHGMLVQLPANMYANKMGVYMQHEFLPAEMRQRVRAFGTHAASILYVSPIQIADGWTLYFATTEPHKMEGLCCVAHSVGHATVQRLCRAVTLDVAMRHMRASICASLAHELMCADAQATATPQSSLASIAGDVRGSNMSRRDVDWRIGSAFQEVRSAFVRKPVVGEAKAGAIVVYRVYRENALRGTRCAARARPSRTCPWGC* # ORIGINAL: g2558.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 42791 44233 . + . ID=g2558;Name=g2558.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 42791 44233 . + . ID=g2558.t1;Parent=g2558;Name=g2558.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 42791 44233 . + . ID=g2558.t1.exon1;Parent=g2558.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 42791 44233 . + 0 ID=cds.g2558.t1;Parent=g2558.t1 #PROT g2558.t1 g2558 MANETPVPKHPPSLRSRIHCSPVYTCMHDAFMRYPRSAIAGSVAVVLTTLLLSLAADAAVPTTTSAAAATRAPSASGSTIRTATAAVSAVSAVSVVSVVSAVSAVSATRPSLATSIPSTAAAAAQHTALWASSSSSSLTSAVRPTATSPSKAGTPANASPAVVSTLSTARASSSTTRATSANAVSSSSSSSAPATSAMSAVVRAITSSTTAVKPAAATNATPSNADANIRTSVGSSSSRASVINTIPALTATQRTPTTAPVSVLSKAAAATPSSTPVLSKAAATLTTTAASKPTTTAPTPTPTTTTTTTTTTTTTTTTTPAGKPASAGSAYVVMPAPGSLRITNPYMTPPYVAFGDVFSLTATFTHTTGGNFTMGVVVVDCLTYNKACVFPQDTYYMKANNATGRPTVLTFTMTFRAPLKGACSLVQAPYAASQWWWPPSWTVWQTAEYFCTTRVRWRSWDYASQRYAYSVPIRITLFGP* # ORIGINAL: g2559.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 44464 44805 . + . ID=g2559;Name=g2559.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 44464 44805 . + . ID=g2559.t1;Parent=g2559;Name=g2559.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 44464 44805 . + . ID=g2559.t1.exon1;Parent=g2559.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 44464 44805 . + 0 ID=cds.g2559.t1;Parent=g2559.t1 #PROT g2559.t1 g2559 MSQPNTFYFVGKDGQQYQTDAHGYVCNNQGRRIGDSSGNPISYTNFDQFPGNKVQTSIAVNENEIQKQTNAAKHKARARLALVILAAMFVLGGIACVTYFAVKTAKDAENKAST # ORIGINAL: g2553.t1 original gene structure, not modified by PASA NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS gene 29088 29309 . + . ID=g2553;Name=g2553.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS mRNA 29088 29309 . + . ID=g2553.t1;Parent=g2553;Name=g2553.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS exon 29088 29309 . + . ID=g2553.t1.exon1;Parent=g2553.t1 NODE_70_length_44805_cov_21.237_potentialcontaminant AUGUSTUS CDS 29088 29309 . + 0 ID=cds.g2553.t1;Parent=g2553.t1 #PROT g2553.t1 g2553 MASNIPPRHAALVDAVFHPVNPTTPTDDLTLPMEERFRDWATYSSFTFTRYAVDADGTTHDETLSIPALRTDA* # PASA_UPDATE: g4947.t1, single gene model update, valid-1, status:[pasa:asmbl_2762,status:12], valid-1 NODE_1834_length_8991_cov_41.5742 . gene 5068 6092 . - . ID=g4947;Name=g4947.t1 NODE_1834_length_8991_cov_41.5742 . mRNA 5068 6092 . - . ID=g4947.t1;Parent=g4947;Name=g4947.t1 NODE_1834_length_8991_cov_41.5742 . five_prime_UTR 5762 6092 . - . ID=g4947.t1.utr5p1;Parent=g4947.t1 NODE_1834_length_8991_cov_41.5742 . exon 5555 6092 . - . ID=g4947.t1.exon1;Parent=g4947.t1 NODE_1834_length_8991_cov_41.5742 . CDS 5555 5761 . - 0 ID=cds.g4947.t1;Parent=g4947.t1 NODE_1834_length_8991_cov_41.5742 . exon 5068 5438 . - . ID=g4947.t1.exon2;Parent=g4947.t1 NODE_1834_length_8991_cov_41.5742 . CDS 5325 5438 . - 0 ID=cds.g4947.t1;Parent=g4947.t1 NODE_1834_length_8991_cov_41.5742 . three_prime_UTR 5068 5324 . - . ID=g4947.t1.utr3p1;Parent=g4947.t1 #PROT g4947.t1 g4947 MGGDIAVHDAPPTEVAVRAAFPSMPPDFKIAVGDVREQFVRGGGKGGQCVNRLANCVMLKHLPTGIEVREHSSRSLERNRKLAHDRLFEKVAHELFGVKRKVDIHK* # ORIGINAL: g4946.t1 original gene structure, not modified by PASA NODE_1834_length_8991_cov_41.5742 AUGUSTUS gene 88 3762 . - . ID=g4946;Name=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS mRNA 88 3762 . - . ID=g4946.t1;Parent=g4946;Name=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS exon 3519 3762 . - . ID=g4946.t1.exon1;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS CDS 3519 3762 . - 0 ID=cds.g4946.t1;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS exon 2213 3402 . - . ID=g4946.t1.exon2;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS CDS 2213 3402 . - 2 ID=cds.g4946.t1;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS exon 1901 1996 . - . ID=g4946.t1.exon3;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS CDS 1901 1996 . - 0 ID=cds.g4946.t1;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS exon 88 1710 . - . ID=g4946.t1.exon4;Parent=g4946.t1 NODE_1834_length_8991_cov_41.5742 AUGUSTUS CDS 88 1710 . - 0 ID=cds.g4946.t1;Parent=g4946.t1 #PROT g4946.t1 g4946 MSRKASSAAVPDFSLTGSTASSLVDPNLSVAKSNVAAGRRSDFGPRTHRPRGAASNHPTSPAGDGRRGRDAWAAGDGCDHPDGFTKDPRFNLLISGDTADSDVSSTLSHSPTTSAMFFPDLDNDQAAGQLEDVNIVRASDDVFGSIDYDSELLGVKKQTDAKVKALLRELEARDAAAREDDWVSHSYPPSTASAQLRVALTGIGGIATDILESNITELKAGKANDLMKRMRDMMEDQRKCRAQFRYSPEAEQLLTRLLYLFAPCSGLVTYIQSKSRQRVIESEDSDPKASEAKRKEEEERQQLEREKEQQLHDEESRFKRSWSLYTPPAARQRLDSRGGDGGASGGGRREGGAVRRRKQPQAQQVLGIMEEESGVETQQTEEDGRAVPDAGRGASKDKKEGKRTSGTRVTISDVVIREECPSPSPSPAPVPADDPFAKQDPDVPKARVSMLTQQLKGVAAVASESESAQKGTRSQADESAHSGMQPASSTEMDATSVSSLSSSSGAMLEKTRSPSQSFPKQVSPKPTEGSQTKDRPVHVSPTSTTPASIPTSPVTAASSAPSSAASSPSVARRERSPYPGLSLPRLFGKDVPPSQHESTSQTASSPAKVSTSAQPSTPTSSPSQSTVSAASSSGTIGKKTGTLRARVLKGFKSLFGRSESPEDNESVGVTPSTPERSPSTPRSPSAPRSPALDAIRRDSLTPSPRSERAGSVDGSSTPPSIDVLCRICEEVVPSDYLEEHSKYCAIAAQCDIKQYSDEARLRKLLRGLHDRVETNRKSVRRHTTHASKAKPRNSEPILSKSPASAVGEIELIDFSEVIEVLASQAANLKYEGPDSVKQCEDLHTQLLSVVSQIRMGSANLEMYTFGKRILNVVQGKLETMRVQMEAERNSRSVTDTDIASNSFGSSTSSIVPGVSATQASTRSTMNTAAQQQTQTSAPSANTVTPPAPRKVLSLFAAIARAGHKRTPSSMSVAQLAAAGAKDGPGVPPSQGGVGSGTESPPGSGSGRFVGRAKRKLPTITDFKILKPISHGAYGRVYLARKKTTNDLYAIK # PASA_UPDATE: g4948.t1, single gene model update, valid-1, status:[pasa:asmbl_2761,status:12], valid-1 NODE_1834_length_8991_cov_41.5742 . gene 6475 8974 . + . ID=g4948;Name=g4948.t1 NODE_1834_length_8991_cov_41.5742 . mRNA 6475 8974 . + . ID=g4948.t1;Parent=g4948;Name=g4948.t1 NODE_1834_length_8991_cov_41.5742 . five_prime_UTR 6475 6927 . + . ID=g4948.t1.utr5p1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 6475 7050 . + . ID=g4948.t1.exon1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 6928 7050 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 7605 7667 . + . ID=g4948.t1.exon2;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 7605 7667 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 7905 7991 . + . ID=g4948.t1.exon3;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 7905 7991 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 8385 8513 . + . ID=g4948.t1.exon4;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 8385 8513 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 8761 8832 . + . ID=g4948.t1.exon5;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 8761 8832 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . exon 8966 8974 . + . ID=g4948.t1.exon6;Parent=g4948.t1 NODE_1834_length_8991_cov_41.5742 . CDS 8966 8974 . + 0 ID=cds.g4948.t1;Parent=g4948.t1 #PROT g4948.t1 g4948 MAASAAGVRGTENRSSSSIAGASDSFPGNTSFIARERTPLLDDEEENFDGIDDAEFRAAYKEILAAIDEGVHPKRIEQGSSGSYFVLNREKEIIGVFKPKDEEPYGQFNPKWTKWFHKVCCPCCFGRSCLIPNQGYMSEAGASLVDSKMKLHVVPKTKRL* # PASA_UPDATE: g4216.t1, single gene model update, valid-1, status:[pasa:asmbl_10163,status:12], valid-1 NODE_968_length_15299_cov_49.9563 . gene 8861 9884 . + . ID=g4216;Name=g4216.t1 NODE_968_length_15299_cov_49.9563 . mRNA 8861 9884 . + . ID=g4216.t1;Parent=g4216;Name=g4216.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 8861 9159 . + . ID=g4216.t1.utr5p1;Parent=g4216.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 9265 9316 . + . ID=g4216.t1.utr5p2;Parent=g4216.t1 NODE_968_length_15299_cov_49.9563 . exon 8861 9159 . + . ID=g4216.t1.exon1;Parent=g4216.t1 NODE_968_length_15299_cov_49.9563 . exon 9265 9884 . + . ID=g4216.t1.exon2;Parent=g4216.t1 NODE_968_length_15299_cov_49.9563 . CDS 9317 9595 . + 0 ID=cds.g4216.t1;Parent=g4216.t1 NODE_968_length_15299_cov_49.9563 . three_prime_UTR 9596 9884 . + . ID=g4216.t1.utr3p1;Parent=g4216.t1 #PROT g4216.t1 g4216 MAENTSQKHKNFIATRMGDKLVTEVAGVGPKIGGELTENGFVYAYNLLGQFLVLNKSIDDFKTWLKEQAPSSNEKHRSDSAECLAKYCELML* # PASA_UPDATE: g4212.t1, single gene model update, valid-1, status:[pasa:asmbl_10162,status:12], valid-1 NODE_968_length_15299_cov_49.9563 . gene 79 1284 . + . ID=g4212;Name=g4212.t1 NODE_968_length_15299_cov_49.9563 . mRNA 79 1284 . + . ID=g4212.t1;Parent=g4212;Name=g4212.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 79 79 . + . ID=g4212.t1.utr5p1;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . exon 79 200 . + . ID=g4212.t1.exon1;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . CDS 80 200 . + 0 ID=cds.g4212.t1;Parent=g4212.t1;5_prime_partial=true NODE_968_length_15299_cov_49.9563 . exon 433 569 . + . ID=g4212.t1.exon2;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . CDS 433 569 . + 2 ID=cds.g4212.t1;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . exon 868 1284 . + . ID=g4212.t1.exon3;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . CDS 868 1014 . + 0 ID=cds.g4212.t1;Parent=g4212.t1 NODE_968_length_15299_cov_49.9563 . three_prime_UTR 1015 1284 . + . ID=g4212.t1.utr3p1;Parent=g4212.t1 #PROT g4212.t1 g4212 RVNDLRHPQRKFKVDMNAQELLMTGMTVLSDDFSIVIVEGGPKAMKKFKRLMLQRIKWNDDNDRDEDEMDESKGPRRKNECALVWEGSVKDRAFRDWRFKLCPTEDLVREQLRKHSVEHYYDMAANYSSALADA* # PASA_UPDATE: g4214.t1, single gene model update, valid-1, status:[pasa:asmbl_10164,status:3], valid-1 NODE_968_length_15299_cov_49.9563 . gene 3078 3920 . + . ID=g4214;Name=g4214.t1 NODE_968_length_15299_cov_49.9563 . mRNA 3078 3920 . + . ID=g4214.t1;Parent=g4214;Name=g4214.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 3078 3191 . + . ID=g4214.t1.utr5p1;Parent=g4214.t1 NODE_968_length_15299_cov_49.9563 . exon 3078 3920 . + . ID=g4214.t1.exon1;Parent=g4214.t1 NODE_968_length_15299_cov_49.9563 . CDS 3192 3857 . + 0 ID=cds.g4214.t1;Parent=g4214.t1 NODE_968_length_15299_cov_49.9563 . three_prime_UTR 3858 3920 . + . ID=g4214.t1.utr3p1;Parent=g4214.t1 #PROT g4214.t1 g4214 MTFIDVLVSPFVWVVDALLDTVQFLLGLIIALPILLFKLATRGPKYLSHPLHLWNTLSPLPFGAHLFSCIIGAIATYTASISPRVVSLTSTSAVVRMTERPWLRNPFASIHAVALINLAECASGLAVLSGLPKDVRGIPVGISMKYDKKSRGRITATCELNLPQFEGETDYNAVSTLKDAAGDVVAVATVQWKLRKSTPKTAAASSSSSSSSADKSGKKKK* # ORIGINAL: g4218.t1 original gene structure, not modified by PASA NODE_968_length_15299_cov_49.9563 AUGUSTUS gene 12768 14708 . + . ID=g4218;Name=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS mRNA 12768 14708 . + . ID=g4218.t1;Parent=g4218;Name=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 12768 12870 . + . ID=g4218.t1.exon1;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 12768 12870 . + 0 ID=cds.g4218.t1;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 13130 13543 . + . ID=g4218.t1.exon2;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 13130 13543 . + 2 ID=cds.g4218.t1;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 13770 13904 . + . ID=g4218.t1.exon3;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 13770 13904 . + 2 ID=cds.g4218.t1;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 14118 14324 . + . ID=g4218.t1.exon4;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 14118 14324 . + 2 ID=cds.g4218.t1;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 14641 14708 . + . ID=g4218.t1.exon5;Parent=g4218.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 14641 14708 . + 2 ID=cds.g4218.t1;Parent=g4218.t1 #PROT g4218.t1 g4218 MASNEVSVDDNPAKRRRVDAEPAVPLNVTEDDEDAPIIPLASTVRRKGGERSRNCPYLDTVQRIMLDFDFEKLCSVSLSNQNVYACLVCGKYFQGRGKASHAYTHALECAHHIFINLETLSVYSLPENYEVVDSSLDDIKYVIRPTYSPEVIKVMDANTKTSRALDGTLYLPGMVGLNNIRANDYFNVVLQSLCHVLPFRSFFLDEKNYGGEKATPLVRMAGDLLRKMWNPRNFKAHVSPHELLQAVVNSSDRRFKITEQSDPIDFLSWFLNTLHRDVGGTKKNGSRNDVGDITEGAAAVRGGKTAWV* # ORIGINAL: g4213.t1 original gene structure, not modified by PASA NODE_968_length_15299_cov_49.9563 AUGUSTUS gene 1391 2752 . - . ID=g4213;Name=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS mRNA 1391 2752 . - . ID=g4213.t1;Parent=g4213;Name=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 2416 2752 . - . ID=g4213.t1.exon1;Parent=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 2416 2752 . - 0 ID=cds.g4213.t1;Parent=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 1705 1823 . - . ID=g4213.t1.exon2;Parent=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 1705 1823 . - 2 ID=cds.g4213.t1;Parent=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS exon 1391 1492 . - . ID=g4213.t1.exon3;Parent=g4213.t1 NODE_968_length_15299_cov_49.9563 AUGUSTUS CDS 1391 1492 . - 0 ID=cds.g4213.t1;Parent=g4213.t1 #PROT g4213.t1 g4213 MAESGAASQSSYVSSLKSWVWSSPPGGQATSSSSSTSSPTATNSKPTTQEQQQRRGHEATKPTTMENATVVTSVDVPQTDGAEEALNTMIAAENAKKKIDCKEQWRMLRECFSTGSAFRSYYIYGHVKDCRSEIVDVRVCVGARFKDPEEAFRLLEANRLEREARRAGDFPIWKMREHPPDEFLK* # PASA_UPDATE: g4215.t1, single gene model update, valid-1, status:[pasa:asmbl_10159,status:3], valid-1 NODE_968_length_15299_cov_49.9563 . gene 4032 8593 . - . ID=g4215;Name=g4215.t1 NODE_968_length_15299_cov_49.9563 . mRNA 4032 8593 . - . ID=g4215.t1;Parent=g4215;Name=g4215.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 8573 8593 . - . ID=g4215.t1.utr5p1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 8167 8207 . - . ID=g4215.t1.utr5p2;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 8573 8593 . - . ID=g4215.t1.exon1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 8107 8207 . - . ID=g4215.t1.exon2;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 8107 8166 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 7480 7569 . - . ID=g4215.t1.exon3;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 7480 7569 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 6934 7083 . - . ID=g4215.t1.exon4;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 6934 7083 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 6638 6759 . - . ID=g4215.t1.exon5;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 6638 6759 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 5996 6276 . - . ID=g4215.t1.exon6;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 5996 6276 . - 1 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 5693 5833 . - . ID=g4215.t1.exon7;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 5693 5833 . - 2 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 5152 5540 . - . ID=g4215.t1.exon8;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 5152 5540 . - 2 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 4815 4895 . - . ID=g4215.t1.exon9;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 4815 4895 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . exon 4032 4490 . - . ID=g4215.t1.exon10;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . CDS 4398 4490 . - 0 ID=cds.g4215.t1;Parent=g4215.t1 NODE_968_length_15299_cov_49.9563 . three_prime_UTR 4032 4397 . - . ID=g4215.t1.utr3p1;Parent=g4215.t1 #PROT g4215.t1 g4215 MLGRSARLAGAVRPVSIIAKRPYSAAVSQYDAYPGVPCKGGVEPASQNVTIGKTRNGITVATQPGNGPAATVAVFVEAGSRHECNSTLGISHYLRALAFKSTANRTAFRITREFEANGVNLYATGSREHLAVVGEGLADSLEPVVETLGDIVQSAVYHPWEIRDANALVELEASRAAATPQVAVIESLHRAVFKGELGNGLYCPEHSQGAFKQADLAAFRAKTHTAGRIIIVGAGVAHEDLVSLVNRAFAGVPAGAKAQPTPAQYKGAGDVRTWTKSDVAHFALAFSGVSASSPDLPALQVLQSLLGTGSNIKRGSGISRLSVRGRKAFDGHFDLSAFSASYSDAGLFGIYGISEAANAGKLVEAAVAELQSVAAGKFAPDEVERAKRQSKNRILMNAETRNVAVEDIGRQVGLFGTFTNVAEAVKAIDGISAEKLSQVASRVLKGSTPTLVAHGDLRNIPVFDGVKF* # PASA_UPDATE: g4217.t1, single gene model update, valid-1, status:[pasa:asmbl_10160,status:12],[pasa:asmbl_10161,status:12], valid-1 NODE_968_length_15299_cov_49.9563 . gene 10049 12204 . - . ID=g4217;Name=g4217.t1 NODE_968_length_15299_cov_49.9563 . mRNA 10049 12204 . - . ID=g4217.t1;Parent=g4217;Name=g4217.t1 NODE_968_length_15299_cov_49.9563 . five_prime_UTR 12080 12204 . - . ID=g4217.t1.utr5p1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . exon 12005 12204 . - . ID=g4217.t1.exon1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . CDS 12005 12079 . - 0 ID=cds.g4217.t1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . exon 11679 11765 . - . ID=g4217.t1.exon2;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . CDS 11679 11765 . - 0 ID=cds.g4217.t1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . exon 11218 11403 . - . ID=g4217.t1.exon3;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . CDS 11218 11403 . - 0 ID=cds.g4217.t1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . exon 10756 10940 . - . ID=g4217.t1.exon4;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . CDS 10756 10940 . - 0 ID=cds.g4217.t1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . exon 10049 10458 . - . ID=g4217.t1.exon5;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . CDS 10134 10458 . - 1 ID=cds.g4217.t1;Parent=g4217.t1 NODE_968_length_15299_cov_49.9563 . three_prime_UTR 10049 10133 . - . ID=g4217.t1.utr3p1;Parent=g4217.t1 #PROT g4217.t1 g4217 MSAMVLSMAGAAARKITSLYIGAFKAFFRSFEVGLRVWITAVFIGASHVPFLAKMGRILLSLAPVRNMVAAEIARFAAKTSVVAVDAPAIVQPTVVKKASAPPPPPPPPPPPPAVAAPPNALLRRHTLPHCLPVARSPRHVTMARVSLVGGGPTATPPTMLFTQTPTKSILKPTGANFSGGGTLHFPKKARTVDRGDLASLCTAGLQAKFQKAGVGAGPYTPSPARVRNGSVTCTAHHNDDEADAWEDDDGACGDAEWASSSAPVGKNLAGALGDADKENVAAMP* # ORIGINAL: g9325.t1 original gene structure, not modified by PASA NODE_2243_length_7098_cov_44.2935 AUGUSTUS gene 1073 2498 . - . ID=g9325;Name=g9325.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS mRNA 1073 2498 . - . ID=g9325.t1;Parent=g9325;Name=g9325.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS exon 1562 2498 . - . ID=g9325.t1.exon1;Parent=g9325.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS CDS 1562 2498 . - 0 ID=cds.g9325.t1;Parent=g9325.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS exon 1073 1452 . - . ID=g9325.t1.exon2;Parent=g9325.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS CDS 1073 1452 . - 2 ID=cds.g9325.t1;Parent=g9325.t1 #PROT g9325.t1 g9325 MAVERVLVAALVALSLAVHIAALPALTGASLPRNSLAEENTKVASDYFDDAMIDPLDDTVKSGEGEGDSLSLVNSADEIYSLLIGGLQSEGLGMNTMISCSDSCAASFPPHSIPNAELFSACRTGCERGMSGSMARLSAIDACPSECVSLYYHEDSSAYACLHGCTVAFDLYATAIAQAEAEAADVGAGDTAEVPEDAQVPVKLPSLPPMYEQQQQQQQQQLQEHVLQKNGLASRKMVRPPAPDFPVPVFGEDGDDATNIVIEVEQRRSHPGAVIFRFLGYFQRTEGDDVPKNSDHDNTLIESPCHHLHTNGDHIHNHDGSIVWVRFVSYWHRLPDWVSHSAAIVSFLLIALYVYYLVREALDDDEDFDEDGDNHALHRRACVVKKGSVHHTCHCGHVTYVLPMLASHASVAMDGPLGSQSDCDKTVLNSADEASFVV* # ORIGINAL: g9324.t1 original gene structure, not modified by PASA NODE_2243_length_7098_cov_44.2935 AUGUSTUS gene 124 522 . + . ID=g9324;Name=g9324.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS mRNA 124 522 . + . ID=g9324.t1;Parent=g9324;Name=g9324.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS exon 124 264 . + . ID=g9324.t1.exon1;Parent=g9324.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS CDS 124 264 . + 0 ID=cds.g9324.t1;Parent=g9324.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS exon 424 522 . + . ID=g9324.t1.exon2;Parent=g9324.t1 NODE_2243_length_7098_cov_44.2935 AUGUSTUS CDS 424 522 . + 0 ID=cds.g9324.t1;Parent=g9324.t1 #PROT g9324.t1 g9324 MTNAKAKDADFTSVIVSPRGEWIYAIAEDKCIYSFSTEGAKLVHSMQLHDKHVAGATHHPYMNLVATYSEDGLLRTWKP* # PASA_UPDATE: g422.t1, single gene model update, valid-1, status:[pasa:asmbl_3258,status:12], valid-1 NODE_2005_length_8131_cov_42.3786 . gene 384 3613 . + . ID=g422;Name=g422.t1 NODE_2005_length_8131_cov_42.3786 . mRNA 384 3613 . + . ID=g422.t1;Parent=g422;Name=g422.t1 NODE_2005_length_8131_cov_42.3786 . five_prime_UTR 384 526 . + . ID=g422.t1.utr5p1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 384 680 . + . ID=g422.t1.exon1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 527 680 . + 0 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 923 1097 . + . ID=g422.t1.exon2;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 923 1097 . + 2 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 1218 1392 . + . ID=g422.t1.exon3;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 1218 1392 . + 1 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 1539 1777 . + . ID=g422.t1.exon4;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 1539 1777 . + 0 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 1963 2193 . + . ID=g422.t1.exon5;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 1963 2193 . + 1 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 2510 2734 . + . ID=g422.t1.exon6;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 2510 2734 . + 1 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 3021 3150 . + . ID=g422.t1.exon7;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 3021 3150 . + 1 ID=cds.g422.t1;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . exon 3413 3613 . + . ID=g422.t1.exon8;Parent=g422.t1 NODE_2005_length_8131_cov_42.3786 . CDS 3413 3613 . + 0 ID=cds.g422.t1;Parent=g422.t1 #PROT g422.t1 g422 MAATTASGSARSLVGRVLAAAEMERLHAQALVAIGALAMLLRYTTSLHGHSGHNKPPMYGDYEAQRHWMEITLHLPASDWYRNTTDNDLLYWGLDYPPLSAYLSWVCGYIGSAIDPSWFALWSSRGIQTDDSRLFMRITVMACDALLFFPAVWLFVRRYYADHPWPRQALALLWLVLLPAVILIDHGHFQYNCVSLGLTLLSIGAVLHGRDCLAAALFTLALNFKHMSLYYAPAFFFYLLGRCIQAGRPKGIARLCAIGMTVIVTFLLCWLPFLSSLESAGHVLRRLFPFERGLFEDKVANFWCTANIVVKLKLLLTQPSLVRISTITTLAALLPSGIDVCRRPTPDRFLSALASSSLAFFLFSYQVHEKAILLPLLPIALTVLRRPIVAAWFAAVAALSMYPLMEKDELRLPYACLVAVHAALSVSVARELRTSVSRIQFYSMLLSAGVMLSLHAFSLIFPPPDRYPDIHAVLMSAWAFVNFACFFLWLNWKQLFSLDETSATKFKGM* # ORIGINAL: g423.t1 original gene structure, not modified by PASA NODE_2005_length_8131_cov_42.3786 AUGUSTUS gene 3956 8013 . - . ID=g423;Name=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS mRNA 3956 8013 . - . ID=g423.t1;Parent=g423;Name=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 7873 8013 . - . ID=g423.t1.exon1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 7873 8013 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 7372 7647 . - . ID=g423.t1.exon2;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 7372 7647 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 7137 7211 . - . ID=g423.t1.exon3;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 7137 7211 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 6717 6818 . - . ID=g423.t1.exon4;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 6717 6818 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 6414 6465 . - . ID=g423.t1.exon5;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 6414 6465 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 6209 6305 . - . ID=g423.t1.exon6;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 6209 6305 . - 2 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 5929 6052 . - . ID=g423.t1.exon7;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 5929 6052 . - 1 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 5628 5753 . - . ID=g423.t1.exon8;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 5628 5753 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 5248 5369 . - . ID=g423.t1.exon9;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 5248 5369 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 4860 4953 . - . ID=g423.t1.exon10;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 4860 4953 . - 1 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 4616 4699 . - . ID=g423.t1.exon11;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 4616 4699 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 4374 4433 . - . ID=g423.t1.exon12;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 4374 4433 . - 0 ID=cds.g423.t1;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS exon 3956 4192 . - . ID=g423.t1.exon13;Parent=g423.t1 NODE_2005_length_8131_cov_42.3786 AUGUSTUS CDS 3956 4192 . - 0 ID=cds.g423.t1;Parent=g423.t1 #PROT g423.t1 g423 MARLILFPSDGASLTDFLHRRGINMRYLGKIAALVKETDSRRLDHLHAICVSEMVSRGAKHVLRALLLVTHKSHVASAVSHFLNCLLANSTPTEKPASKTLPPYAMLTGDVLWSAIAAEVKARFAFDIDVSFDLSALRKRHPLSRYGVSKLSLLRSLCLKTGIQVAARDYPMNSAEITAFTPADIRGLVPVTKDSLPKSLDVISYIEIGKTELNKGNISEAFHAFNTALALAQRVYGPVHAEVATAYGNLAVTLSNTEELKGAVVYQNNAVVLTERVYGVDHFETQRAYLTLAQLYRNIGNHTLALRCLARARYLLDIMSGPTAVELPSIDTQIGAILADDGYVQVGMRYLTLARDTQEALYGKLSLTHAASNRQIAKALLNEGDYKGALACEKAAYTVFEAKLGKDDPRTKQSEILLQYYTRSAVDKQMQIAHRQEEENVQKRKKLGGEKVVALSADGSDQRSISDLLDFIEGNEPRRHKGKISRAGAVPAPVVGGRRVSVARVAGQSDATAAGGKSTAKQAGAKAHN* # ORIGINAL: g12940.t1 original gene structure, not modified by PASA NODE_2095_length_7757_cov_25.2144 AUGUSTUS gene 1054 2751 . + . ID=g12940;Name=g12940.t1 NODE_2095_length_7757_cov_25.2144 AUGUSTUS mRNA 1054 2751 . + . ID=g12940.t1;Parent=g12940;Name=g12940.t1 NODE_2095_length_7757_cov_25.2144 AUGUSTUS exon 1054 1297 . + . ID=g12940.t1.exon1;Parent=g12940.t1 NODE_2095_length_7757_cov_25.2144 AUGUSTUS CDS 1054 1297 . + 0 ID=cds.g12940.t1;Parent=g12940.t1 NODE_2095_length_7757_cov_25.2144 AUGUSTUS exon 1514 2751 . + . ID=g12940.t1.exon2;Parent=g12940.t1 NODE_2095_length_7757_cov_25.2144 AUGUSTUS CDS 1514 2751 . + 2 ID=cds.g12940.t1;Parent=g12940.t1 #PROT g12940.t1 g12940 MSDVVAVGFNALAPETVVHHIVPYLSNADVSSLSKVNSVLHSHLRGKRLYHLWPLYVRKYVEEPLFREEVKAAIPVNRIVLGRGLSLSGDLRLPTAQSVVVISGVGDLQCLEGVSRVDLQSGDFSDLSPLRHAKYVSLDELDVEDISPLANAREIHIVKCPKIMDVSMLRNVRVFVMHNCMFTAIPPELGSLHRLELKSTQLRDVSAVRCIHTLILMDCHMIENISSLSNVHHTLDLSVSMDTVCRMPTFDVSCLSRLHTLRLDYRPFTGISQLGDVHTLSVARAKFNDSDLLSLSSVHTLCLAKTQAADVSSLGNVHTLDLSRCGHLGDLSALSRCHSLDLTSARCFDVSSLGGVHTLVLRGTAVSDVSSLGGVHTLDLCRTACVDVSALGSVWSLDLSGTKVTNVSALGSVWSLNLAKTPVSDVSMLGSVHILNLIDCKNVSNVSALGNVHTLRLRRTSVTDVSSLARVCVLSVDDSLKCDLLKGSVRKLL* # ORIGINAL: g5945.t1 original gene structure, not modified by PASA NODE_4166_length_2085_cov_30.3035 AUGUSTUS gene 366 1329 . + . ID=g5945;Name=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS mRNA 366 1329 . + . ID=g5945.t1;Parent=g5945;Name=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS exon 366 559 . + . ID=g5945.t1.exon1;Parent=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS CDS 366 559 . + 0 ID=cds.g5945.t1;Parent=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS exon 703 835 . + . ID=g5945.t1.exon2;Parent=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS CDS 703 835 . + 1 ID=cds.g5945.t1;Parent=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS exon 913 1329 . + . ID=g5945.t1.exon3;Parent=g5945.t1 NODE_4166_length_2085_cov_30.3035 AUGUSTUS CDS 913 1329 . + 0 ID=cds.g5945.t1;Parent=g5945.t1 #PROT g5945.t1 g5945 MISSLAETTGQAALGSRGGSARWRDLCTGGVPWDVLAGAGGRAGAAEAGKGGVILSFAHRIASQWRVFGFCFLKRSCWTQDRGNPPRAFATASRHVERNAVSGKVRADHARPPSGRCMGSKGAAKLRAEELPLLLRRLEVLPDLRTSFFYSADKSDFDALVCSNGLVPMLGVYNETARYVDQGGNKRAGACAIYLEPWHADAYESLDLKKNAGFDEMRARDLFYAPWVPDLHASCGGQCQVVAVLPA* # PASA_UPDATE: g5946.t1, single gene model update, valid-1, status:[pasa:asmbl_7048,status:12], valid-1 NODE_4166_length_2085_cov_30.3035 . gene 1405 1922 . - . ID=g5946;Name=g5946.t1 NODE_4166_length_2085_cov_30.3035 . mRNA 1405 1922 . - . ID=g5946.t1;Parent=g5946;Name=g5946.t1 NODE_4166_length_2085_cov_30.3035 . five_prime_UTR 1892 1922 . - . ID=g5946.t1.utr5p1;Parent=g5946.t1 NODE_4166_length_2085_cov_30.3035 . exon 1746 1922 . - . ID=g5946.t1.exon1;Parent=g5946.t1 NODE_4166_length_2085_cov_30.3035 . CDS 1746 1891 . - 0 ID=cds.g5946.t1;Parent=g5946.t1 NODE_4166_length_2085_cov_30.3035 . exon 1405 1608 . - . ID=g5946.t1.exon2;Parent=g5946.t1 NODE_4166_length_2085_cov_30.3035 . CDS 1407 1608 . - 1 ID=cds.g5946.t1;Parent=g5946.t1 NODE_4166_length_2085_cov_30.3035 . three_prime_UTR 1405 1406 . - . ID=g5946.t1.utr3p1;Parent=g5946.t1 #PROT g5946.t1 g5946 MRPSLKKDAYLAEKQATIDQKTEAIRQHELEIMRLRHRIAILEGDWNLGTVSHSAFFHRLNIVTDLDAFPSLDNPLHVTWLLPRIPGATSESQVQAEWGQSLDTASVHAFTPRVY* # PASA_UPDATE: g14404.t1, single gene model update, valid-1, status:[pasa:asmbl_7227,status:3], valid-1 NODE_432_length_23836_cov_42.1294 . gene 9628 11624 . + . ID=g14404;Name=g14404.t1 NODE_432_length_23836_cov_42.1294 . mRNA 9628 11624 . + . ID=g14404.t1;Parent=g14404;Name=g14404.t1 NODE_432_length_23836_cov_42.1294 . five_prime_UTR 9628 9656 . + . ID=g14404.t1.utr5p1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 9628 9738 . + . ID=g14404.t1.exon1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 9657 9738 . + 0 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 9996 10038 . + . ID=g14404.t1.exon2;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 9996 10038 . + 2 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 10166 10345 . + . ID=g14404.t1.exon3;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 10166 10345 . + 1 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 10584 10815 . + . ID=g14404.t1.exon4;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 10584 10815 . + 1 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 11059 11139 . + . ID=g14404.t1.exon5;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 11059 11139 . + 0 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . exon 11424 11624 . + . ID=g14404.t1.exon6;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . CDS 11424 11594 . + 0 ID=cds.g14404.t1;Parent=g14404.t1 NODE_432_length_23836_cov_42.1294 . three_prime_UTR 11595 11624 . + . ID=g14404.t1.utr3p1;Parent=g14404.t1 #PROT g14404.t1 g14404 MGDLVDVQERDPIHAGHHCDVPECSQLDFLPASCERCGRRLCGEHRAYAAHSCSFLDAATRVGDAPAHRPLDESAVCEKDGCGLREILRVECKSCGKTFCFAHRLEVDHSCASLTAGRSAPRPRPAPVVIKKMHPKVIAMKVKMGAVGNNGIPAANRMHLRVVALDTEPPKLLKAFYAKTDVVGRVIDASLDALKLPNLNNQIASKASRLFNGESGRVLPPSSQLCACEGIADASLVVISATQADALAPDDVERAQGAGLNI* # ORIGINAL: g14403.t1 original gene structure, not modified by PASA NODE_432_length_23836_cov_42.1294 AUGUSTUS gene 2953 8928 . - . ID=g14403;Name=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS mRNA 2953 8928 . - . ID=g14403.t1;Parent=g14403;Name=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 7468 8928 . - . ID=g14403.t1.exon1;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 7468 8928 . - 0 ID=cds.g14403.t1;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 7021 7248 . - . ID=g14403.t1.exon2;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 7021 7248 . - 0 ID=cds.g14403.t1;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 4031 6701 . - . ID=g14403.t1.exon3;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 4031 6701 . - 0 ID=cds.g14403.t1;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 3229 3759 . - . ID=g14403.t1.exon4;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 3229 3759 . - 2 ID=cds.g14403.t1;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 2953 3053 . - . ID=g14403.t1.exon5;Parent=g14403.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 2953 3053 . - 2 ID=cds.g14403.t1;Parent=g14403.t1 #PROT g14403.t1 g14403 MGDNVAQSKGSNKRKSSTPQRLAASADNASDVLASLDGVSDDYNRVSANDEHASEPVGESAFAASLAKRRKTSPDTRFKIPLLAPAEKNGDTPPHVPVVHLVAIVAPGRLYSAGDFRKASVVCRIKVDRVDGFFDFARTFQDLCTFQIIDGLGTTPEERAAIIAVLASRACHIAIRKISNDAAIFTVCLPLHVTFKYPRGVWDVLCYATRSADPWLSLASATHPQHSRPYNEPQGVRDFLQQLRASPQADDMHQPPTLVTAMRPYQRRAAAFLVRREIDGIARDVRLYGTWVRVRTVVNQPPPVPTGSGFSAAQLLAGKRTVETRSFEFWANIQTGFVTMTDPAIMYPPHPLPGGILADEMGLGKTIEVLACVLGNPAPISRVHAKTSMPPCARGAAGDEDRTFCFCGEAVPATAAVRVTCGTCSFSFHRKCFGNGIPLEDFQCSWCKIAGGMIEGRSTLIISPSSIFKQWASEIEKHAQAGSIKLMLYEGAKVSRYVDPEQLANADIVLTTYDALKADYHYAKAAEFEEQGRSRRRSKKYRVLPTPLISVRWWRVCLDEAQMIESTHSNVFMMASWLEAVHRWCVTGTPIQQSVRDLKGLCVFLRFPGMEHWDSTIQFPANDVSAFADLFRGVFWRTNKASVADELGIPMQHDHEAWLTFLDVERHMYERRREKCAADATDHVDRLIKTRNYTANEHLDRLDAHTFRFLMAPLLSLRQACDHPQIGAPRMRRRGRARPNPMAGVNNQVYYNNDNGMNNNGGGVAGADGGHILGNAPPQIDAPRTMRELLVEQQKHAVTKCENDLRSVLFCINGIAGVHMLMNQPAEAVALYREARDLAAANEGLFRADKLPMLHCLYNLNEALSMCPELQRRDPEEDSRVIADEVDRRRNEYVQKFLSDVSRSQMDATALTDKIEALLADAGRVPWWASAVEKLQRDAGCGAAFVDDVRAQLSENMAAVGRNSAAAATTFVDSFTDMRGLSFALDSELTRLDEARREMKRVIDALPSHPTVGEVQAAINCRECRPERTGPACIFCRAEVAFDSVQRRLFASVADANSATGGMFGAASRKELMLNDVLSRSEGANGDDEEGDDGEYAHKTSNVHEMHDSDPIRVLKMLGTAARGSGGDAESLKAHMAAIDLMRKEYIRYHALWNAKRDLVSTMDETIMAVNRLRLAAPGEKVPASLRHMIVTEGVADTQLAVLTRDKAQHQHNLAHSKSRLQFLQNLQRNPEESAPCPVCLEMMQGKCAMLTCGHMFCSMCTVELVEVARRSHKRMLQCPTCRNKAPFNDIALVAVKEDAISGNQSGGVVKAGEKSVRSSRDADDADHDFELRHLTGKFGTKIGKLVFHLLRMKRMTPAAKTIVFSQWAEVLHVVSKALAEVMIGHEHPASSTRAFAVSVERFKTNPDVRVLLLALSQGGNGLNITEATNVFLLEPTLNPAAELQAVGRVHRIGQTKETHVYRMYIRGTVEERIVDYSEQRRVSTATAGSASATTATERADGPSSGASGAPGDPAHVTVSGGVAGGDADIPMCVDDNIGGARLTLASFAALFDDPQEDQHAVGVFPFWIARVEYEGAPVSRAVVADRLEVSAAARMRMGEREWLAGHRTLLFDRDMSLFAAEELLHLDSVDEDSDIIKAAVRILRTKIWKMCAECQHNWENWH* # ORIGINAL: g14405.t1 original gene structure, not modified by PASA NODE_432_length_23836_cov_42.1294 AUGUSTUS gene 14757 17487 . + . ID=g14405;Name=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS mRNA 14757 17487 . + . ID=g14405.t1;Parent=g14405;Name=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 14757 16197 . + . ID=g14405.t1.exon1;Parent=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 14757 16197 . + 0 ID=cds.g14405.t1;Parent=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 16455 17155 . + . ID=g14405.t1.exon2;Parent=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 16455 17155 . + 2 ID=cds.g14405.t1;Parent=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 17353 17487 . + . ID=g14405.t1.exon3;Parent=g14405.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 17353 17487 . + 0 ID=cds.g14405.t1;Parent=g14405.t1 #PROT g14405.t1 g14405 MEDPVRDAWLRAVERVSACRNGGAFLYSPANDVLVGTRGFWVCAFARNLDEVTRKRARVTSLGDLASMLVNDDPTRNILTAGLIDLCAGKISHLTVPVDFGDSRVSLSASGDVATGTAVVELAPGPCTCGPLIVPMSEVFVAGTVRRTSSAYAAASSTDGINLPRGPNAVPVPQPASGAGGGDTKQMPGSANEGLQLGQVCSKCGVLGVIRLVGSLDRADVLFCGAGASPECSPADRRPSESLPLGSHLPTDMRVPPSGLETSFPHTSTKDSAFSTQLPPSARRPLCRPGSAAAAAAGVSSFQMPDQGHVRAGPDGRFWSEAEAITADAEVADINGALCDSTAPSLNTGKTGDKDSMPDAVEQGPSVTTSASQFPGECGGREFRQAHAANTLHRTRSRPLPNPCKRTGGLVEAEDVAGFGRWEVNLRDGGLTWSAGMFALFGRSHWDEPPKCFARMLAYLDPIDAMKLSALAATALERGTGHLCDVRIPLACGRERVLLMRGYIVRDGHSQTPVQWHGYAQDVTNIRVLRDRLVLTKRLLRHAQVMANVGTWVYMPETDSIMWTKEVHVMHGIHVEDVRSSSSHSVSSVCEQEVDAAQMLWSDRCDALSDIKFERLSSTPASLDAYTELVHPDDRSSFMQHIYYPLKCGAPRFEHTYRVLVKEDGVAKTRHLYVRGECARQDGRLTATGFVQDVTERAMPLLLRSASDEALDDKVRTSIACLHGLVDLLRSSQLTTEQYDDLDLLSVALRDLVGHVIY* # PASA_UPDATE: g14407.t1, single gene model update, valid-1, status:[pasa:asmbl_7229,status:12], valid-1 NODE_432_length_23836_cov_42.1294 . gene 21494 23678 . - . ID=g14407;Name=g14407.t1 NODE_432_length_23836_cov_42.1294 . mRNA 21494 23678 . - . ID=g14407.t1;Parent=g14407;Name=g14407.t1 NODE_432_length_23836_cov_42.1294 . five_prime_UTR 23569 23678 . - . ID=g14407.t1.utr5p1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . five_prime_UTR 23362 23412 . - . ID=g14407.t1.utr5p2;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . five_prime_UTR 23075 23116 . - . ID=g14407.t1.utr5p3;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 23569 23678 . - . ID=g14407.t1.exon1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 23362 23412 . - . ID=g14407.t1.exon2;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 23003 23116 . - . ID=g14407.t1.exon3;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . CDS 23003 23074 . - 0 ID=cds.g14407.t1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 22466 22833 . - . ID=g14407.t1.exon4;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . CDS 22466 22833 . - 0 ID=cds.g14407.t1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 22131 22303 . - . ID=g14407.t1.exon5;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . CDS 22131 22303 . - 1 ID=cds.g14407.t1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 21882 21907 . - . ID=g14407.t1.exon6;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . CDS 21882 21907 . - 2 ID=cds.g14407.t1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . exon 21494 21718 . - . ID=g14407.t1.exon7;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . CDS 21653 21718 . - 0 ID=cds.g14407.t1;Parent=g14407.t1 NODE_432_length_23836_cov_42.1294 . three_prime_UTR 21494 21652 . - . ID=g14407.t1.utr3p1;Parent=g14407.t1 #PROT g14407.t1 g14407 MQVHASNSSPPKAKKDNGWFGKKKNDPESAPLLEDAEAGRSSVPAVVAYQQQQQQHSGAAGVGGGYGSTSGGYQGAAPAQQPHGERRVYTGSASSSSCFPCFNRTKKLPTKIPMRVEPKTYFANERTFLSWLHMAVLMATVSVGIIGFGDKVSRVGGMALLAVGVIFTVYALCIFHWRAIRIRNRASGPYDDRFGPTMLVILLVAALIFNFAVNLNNLESGTKHHAEPITSPSL* # ORIGINAL: g14406.t1 original gene structure, not modified by PASA NODE_432_length_23836_cov_42.1294 AUGUSTUS gene 18856 20867 . - . ID=g14406;Name=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS mRNA 18856 20867 . - . ID=g14406.t1;Parent=g14406;Name=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 20226 20867 . - . ID=g14406.t1.exon1;Parent=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 20226 20867 . - 0 ID=cds.g14406.t1;Parent=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 19816 20024 . - . ID=g14406.t1.exon2;Parent=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 19816 20024 . - 0 ID=cds.g14406.t1;Parent=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS exon 18856 19552 . - . ID=g14406.t1.exon3;Parent=g14406.t1 NODE_432_length_23836_cov_42.1294 AUGUSTUS CDS 18856 19552 . - 1 ID=cds.g14406.t1;Parent=g14406.t1 #PROT g14406.t1 g14406 MVSKGVPTLFIVLIATAAAIAQCHATEEPSSVFATDATNEGTPSDALSAAHSTGSFVATDEWQELEDGQAIPAGLHVQLDMTTGKRRVKLLENAPGVRPSIQKVGRHEGALVSIEKNIELTNEERLELRERLRKLKDEPSSPFSEEVEARHNALRKAMEDAMKELDGSAGDVASASAADANDDDEGPRSWEELKSAMGEIEKVLKMRSDVEIMKEHVGVLRNGNATTNDRIHALSELEEFVHQVDNAVDLDSIGGLKLVVGALDDADADVRALAALVLGSAMQSNPPVQLRALEHGAIPRLVALATDRSDVVSRRSLYALSAIARHYPQAQEAMFASTDSREKLLTVFAREDHGSRLKLCTLLGDLLGGTPGATQDTSSAAVSKWLPALLVPDLTDADADNHDVSRYAWCDAVQVGLSGGTNSDVESSLRAMGALMDRCGDRYTLLEKEGVVRSLAEKWVAEAEEAQREGTDEYLGQLIDLAEYVADRIRSCVNTCLPVKGKPPRRMMRRNPDDL* # PASA_UPDATE: g14402.t1, single gene model update, valid-1, status:[pasa:asmbl_7226,status:12], valid-1 NODE_432_length_23836_cov_42.1294 . gene 290 2623 . + . ID=g14402;Name=g14402.t1 NODE_432_length_23836_cov_42.1294 . mRNA 290 2623 . + . ID=g14402.t1;Parent=g14402;Name=g14402.t1 NODE_432_length_23836_cov_42.1294 . five_prime_UTR 290 308 . + . ID=g14402.t1.utr5p1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 290 408 . + . ID=g14402.t1.exon1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 309 408 . + 0 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 628 873 . + . ID=g14402.t1.exon2;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 628 873 . + 2 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 1094 1179 . + . ID=g14402.t1.exon3;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 1094 1179 . + 2 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 1384 1543 . + . ID=g14402.t1.exon4;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 1384 1543 . + 0 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 1677 1996 . + . ID=g14402.t1.exon5;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 1677 1996 . + 2 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . exon 2186 2623 . + . ID=g14402.t1.exon6;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . CDS 2186 2530 . + 0 ID=cds.g14402.t1;Parent=g14402.t1 NODE_432_length_23836_cov_42.1294 . three_prime_UTR 2531 2623 . + . ID=g14402.t1.utr3p1;Parent=g14402.t1 #PROT g14402.t1 g14402 MLLNKLADITPDGRYTGDTNKDKQFAATLSPLLVGRIGIMGLVLGNLRSALTISIRYSAVRRQFGVPGASEEMPVLEYQLQQYRLIPYLAGCYAIDFFYKWLSAYNFALEKADTKDDRAVAELHALASAGKSVSAWISRDAIQTSRECCGGHGYSAVNGLGRLRDDNDPNLTYEGDNNVLMQQTAKYIVGALRKVHEGKPVTSPLGTTSYASLLADGGMNTTCDATEPSHFAAEACYLGALRYRAAWLLQKAGEKLSVEIASGKDMFTAWNDSQVFALQAAARAYIDLVMTERFLDGIERCNDSTLVPALRNLCAVFALWRIESDLFCLRDAEYINSDQGQHIRDALLVTCRAAAKDAVCFVDAVAPPDAILFSPIGRSDGEAYLHLYQTVLSTPGAMERPKWWADTRVPAQPRSLSW* # PASA_UPDATE: g1371.t1, single gene model update, valid-1, status:[pasa:asmbl_9031,status:12], valid-1 # PASA_UPDATE: g1371.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9033,status:12], valid-1 # PASA_UPDATE: g1371.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9032,status:12], valid-1 NODE_71_length_44790_cov_41.7412 . gene 6297 8646 . - . ID=g1371;Name=g1371.t1 NODE_71_length_44790_cov_41.7412 . mRNA 6297 8646 . - . ID=g1371.t1;Parent=g1371;Name=g1371.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 8614 8646 . - . ID=g1371.t1.utr5p1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 8545 8646 . - . ID=g1371.t1.exon1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 8545 8613 . - 0 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 8173 8387 . - . ID=g1371.t1.exon2;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 8173 8387 . - 0 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 7947 8023 . - . ID=g1371.t1.exon3;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 7947 8023 . - 1 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 7637 7761 . - . ID=g1371.t1.exon4;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 7637 7761 . - 2 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 7237 7477 . - . ID=g1371.t1.exon5;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 7237 7477 . - 0 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 6865 6978 . - . ID=g1371.t1.exon6;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 6865 6978 . - 2 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . exon 6297 6627 . - . ID=g1371.t1.exon7;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . CDS 6488 6627 . - 2 ID=cds.g1371.t1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 6297 6487 . - . ID=g1371.t1.utr3p1;Parent=g1371.t1 NODE_71_length_44790_cov_41.7412 . mRNA 6297 8646 . - . ID=g1371.t1.1.5b6be70c;Parent=g1371;Name=g1371.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 8614 8646 . - . ID=g1371.t1.1.5b6be70c.utr5p1;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 8545 8646 . - . ID=g1371.t1.1.5b6be70c.exon1;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 8545 8613 . - 0 ID=cds.g1371.t1.1.5b6be70c;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 8173 8387 . - . ID=g1371.t1.1.5b6be70c.exon2;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 8173 8387 . - 0 ID=cds.g1371.t1.1.5b6be70c;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 7947 8023 . - . ID=g1371.t1.1.5b6be70c.exon3;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7947 8023 . - 1 ID=cds.g1371.t1.1.5b6be70c;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 7637 7761 . - . ID=g1371.t1.1.5b6be70c.exon4;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7637 7761 . - 2 ID=cds.g1371.t1.1.5b6be70c;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 6865 7477 . - . ID=g1371.t1.1.5b6be70c.exon5;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7178 7477 . - 0 ID=cds.g1371.t1.1.5b6be70c;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 6297 6627 . - . ID=g1371.t1.1.5b6be70c.exon6;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . three_prime_UTR 6865 7177 . - . ID=g1371.t1.1.5b6be70c.utr3p1;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . three_prime_UTR 6297 6627 . - . ID=g1371.t1.1.5b6be70c.utr3p2;Parent=g1371.t1.1.5b6be70c NODE_71_length_44790_cov_41.7412 . mRNA 6297 8646 . - . ID=g1371.t1.2.5b6be70c;Parent=g1371;Name=g1371.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 8614 8646 . - . ID=g1371.t1.2.5b6be70c.utr5p1;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 8545 8646 . - . ID=g1371.t1.2.5b6be70c.exon1;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 8545 8613 . - 0 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 8173 8387 . - . ID=g1371.t1.2.5b6be70c.exon2;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 8173 8387 . - 0 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 7947 8023 . - . ID=g1371.t1.2.5b6be70c.exon3;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7947 8023 . - 1 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 7637 7761 . - . ID=g1371.t1.2.5b6be70c.exon4;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7637 7761 . - 2 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 7237 7477 . - . ID=g1371.t1.2.5b6be70c.exon5;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 7237 7477 . - 0 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . exon 6297 6978 . - . ID=g1371.t1.2.5b6be70c.exon6;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . CDS 6797 6978 . - 2 ID=cds.g1371.t1.2.5b6be70c;Parent=g1371.t1.2.5b6be70c NODE_71_length_44790_cov_41.7412 . three_prime_UTR 6297 6796 . - . ID=g1371.t1.2.5b6be70c.utr3p1;Parent=g1371.t1.2.5b6be70c #PROT g1371.t1 g1371 MATSVTCARRLHRILAHVRPAPHSQVVRVATAASLDISSQSRGTHNCAGGEIERSYESTVYSTNENGSPAVRVETSGPVATVILDRAGVKNAIDGPTANALANAFRDFDKNENVAVAVLWGGGGTFCAGADLKAIAHSHGRGNRLDPDGDGPLGPTRMLLSKPVIAAVSGYAVAGGLELALWCDMRVVEDDATFGVFCRRFGVPLIDGGSVRLPRLIGLSHAMDLILTGRAVDAAEALRMGLANRIVPKGRSRSEAEALAHKIAAFPQLCMRGDRMSALQSAYGSESIEASMRKEFAIGQSALTAETLAGARRFADGGGRHGAGTR* #PROT g1371.t1.1.5b6be70c g1371 MATSVTCARRLHRILAHVRPAPHSQVVRVATAASLDISSQSRGTHNCAGGEIERSYESTVYSTNENGSPAVRVETSGPVATVILDRAGVKNAIDGPTANALANAFRDFDKNENVAVAVLWGGGGTFCAGADLKAIAHSHGRGNRLDPDGDGPLGPTRMLLSKPVIAAVSGYAVAGGLELALWCDMRVVEDDATFGVFCRRFGVPLIDGGSVRLPRLIGLSHAMDLILTGRAVDAAEALRMGLGVCCLWYCGVCLLCCVPAV* #PROT g1371.t1.2.5b6be70c g1371 MATSVTCARRLHRILAHVRPAPHSQVVRVATAASLDISSQSRGTHNCAGGEIERSYESTVYSTNENGSPAVRVETSGPVATVILDRAGVKNAIDGPTANALANAFRDFDKNENVAVAVLWGGGGTFCAGADLKAIAHSHGRGNRLDPDGDGPLGPTRMLLSKPVIAAVSGYAVAGGLELALWCDMRVVEDDATFGVFCRRFGVPLIDGGSVRLPRLIGLSHAMDLILTGRAVDAAEALRMGLANRIVPKGRSRSEAEALAHKIAAFPQLCMRGDRMSALQSESGFNCFSSIRTLFLYAKRGQ* # PASA_UPDATE: g1375.t1, single gene model update, valid-1, status:[pasa:asmbl_9043,status:3], valid-1 NODE_71_length_44790_cov_41.7412 . gene 20036 21003 . + . ID=g1375;Name=g1375.t1 NODE_71_length_44790_cov_41.7412 . mRNA 20036 21003 . + . ID=g1375.t1;Parent=g1375;Name=g1375.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 20036 20102 . + . ID=g1375.t1.utr5p1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . exon 20036 20220 . + . ID=g1375.t1.exon1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . CDS 20103 20220 . + 0 ID=cds.g1375.t1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . exon 20338 20543 . + . ID=g1375.t1.exon2;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . CDS 20338 20543 . + 2 ID=cds.g1375.t1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . exon 20658 20703 . + . ID=g1375.t1.exon3;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . CDS 20658 20703 . + 0 ID=cds.g1375.t1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . exon 20817 21003 . + . ID=g1375.t1.exon4;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . CDS 20817 20917 . + 2 ID=cds.g1375.t1;Parent=g1375.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 20918 21003 . + . ID=g1375.t1.utr3p1;Parent=g1375.t1 #PROT g1375.t1 g1375 MDKIDNINPTIYQASAARVLTASEEDEGVYDPIDQREIFDLIRNINDPEHPLTLEELKVAQEAHIEIDDENNFVRVQFTPTIPHCSMATLIGLCIRVKLLRCLPERFKVDVSIRPGTHASEEAVNKQLSDKERVAAALENGHLLEVVNQCLSTKST* # PASA_UPDATE: g1379.t1, single gene model update, valid-1, status:[pasa:asmbl_9038,status:3], valid-1 NODE_71_length_44790_cov_41.7412 . gene 41901 44634 . - . ID=g1379;Name=g1379.t1 NODE_71_length_44790_cov_41.7412 . mRNA 41901 44634 . - . ID=g1379.t1;Parent=g1379;Name=g1379.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 44633 44634 . - . ID=g1379.t1.utr5p1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . exon 44545 44634 . - . ID=g1379.t1.exon1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . CDS 44545 44632 . - 0 ID=cds.g1379.t1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . exon 43765 44219 . - . ID=g1379.t1.exon2;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . CDS 43765 44219 . - 2 ID=cds.g1379.t1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . exon 42903 43376 . - . ID=g1379.t1.exon3;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . CDS 42903 43376 . - 0 ID=cds.g1379.t1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . exon 41901 42701 . - . ID=g1379.t1.exon4;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . CDS 42522 42701 . - 0 ID=cds.g1379.t1;Parent=g1379.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 41901 42521 . - . ID=g1379.t1.utr3p1;Parent=g1379.t1 #PROT g1379.t1 g1379 MECAWPPGPQTEMRRLFCAQYEGYGSLCDCASVEGTAPKTRPFLDGTRSEIPVAIIAGNRPQYLRRSIQSVLMAYGADERMVSVHVDGSFPEVTSLVRVMGLRVYESKPRGEKNGRICNHYRQSLTRMFDSLHPTAPFILVMEEDVDSAPDLLEYFRQTVPLLDLDPTLYCVSAWNDQGYEHSAIDPSAVYRVETMPGLGWVLSRRLYKGELESKWPAAEKRWDWDMWMRMPSQIKGRECIIPDVSRTFHFGASGVNMNHYFQRAYFGHHKINAVPHVTLRDLDRMVAPEYEKMLSALVAAGTPVKTNLSPCDERFIADGMEGSTLVVYFHQAKPGDYKPWLKITKCLKMWDLDVRGFHKNTFRFYAKGAHVIAVGSNSPYFVHKPSGLTPLRVPDDK* # ORIGINAL: g1372.t1 original gene structure, not modified by PASA NODE_71_length_44790_cov_41.7412 AUGUSTUS gene 9061 12581 . + . ID=g1372;Name=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS mRNA 9061 12581 . + . ID=g1372.t1;Parent=g1372;Name=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 9061 9183 . + . ID=g1372.t1.exon1;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 9061 9183 . + 0 ID=cds.g1372.t1;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 9423 9549 . + . ID=g1372.t1.exon2;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 9423 9549 . + 0 ID=cds.g1372.t1;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 9796 10366 . + . ID=g1372.t1.exon3;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 9796 10366 . + 2 ID=cds.g1372.t1;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 10766 12581 . + . ID=g1372.t1.exon4;Parent=g1372.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 10766 12581 . + 1 ID=cds.g1372.t1;Parent=g1372.t1 #PROT g1372.t1 g1372 MARKQTHADRLAVIATVVSVKGGSKLYYYACNECNKKFEAKVLLANDGRVTRCDGCGASVVPANGHWRYRLCLGIADASGVGDVVAFGECVEGLVGIPAVDLHTALCGKSRDLCLEPSVLLSDPSNDALMRLRRAVNDALLGRELWFEFPADTCANNNSNTRNGNNRNLASTIAPSLTVDPTDPFCVQRVITTSIADMWSRSSGAASAHERGQLRARRLGVGRPRHGGGPTGPVAPTVVAANRQLVCTSLIPLDADVSRTLRDRIIREFAVESRLSAVQPIDTAVPSDASHTTHSDAQAIDVTSDITANIVDMLAELGNVSRDESPNRIQTDGAMAGCGGNGSGSLAYVAGSEYAFSLHVHTLRADCVMGSTSPFVGSSNSNSNSNSNSNSNSNSNNNSNNNNNNNNNINARMAAQTILSGCSADKQPTSSLSLNTQSSPLPPARQRGVRRPISSPLTPAWIANGGIPRNKRACVSDVSLCSFRDTQLASATFRAGPDIELDEPLSNIMHFVEDFTQNAQESPVDLCDENEDADADARFGFGDIDGALCNAVRSDTHRVSSPESPYEPRTALRGYGQQSANPQDGAAFFSESGSGCDASEFGPADDLESVLLGYSASGAVRATQGIAALSSTRPSEVNAGSSGGLVLGVGDGCRDAAHGNNNWREANPIEESPSLKVVREPILNTVRTCDDVDTTTPLPSVTRLHRHDKDRGELTTCVDSPDLFSPVNTYNWSSSAVRRPAPTVGGYVGANKENNRPDSRASVTLFSEPRRGRTDDQRHRQSLGLFNAVAMVPPPTTRRIGINDLGDGTPWGPATDAVHEAWTSRMSRLSLCHSPTEDVRVGGNSVDVRADEDGWDGASPSTRDSVSLRLFDSSPEDD* # PASA_UPDATE: g1374.t1, single gene model update, valid-1, status:[pasa:asmbl_9035,status:3], valid-1 NODE_71_length_44790_cov_41.7412 . gene 15834 19586 . - . ID=g1374;Name=g1374.t1 NODE_71_length_44790_cov_41.7412 . mRNA 15834 19586 . - . ID=g1374.t1;Parent=g1374;Name=g1374.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 19511 19586 . - . ID=g1374.t1.utr5p1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 19420 19586 . - . ID=g1374.t1.exon1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 19420 19510 . - 0 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 18993 19147 . - . ID=g1374.t1.exon2;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 18993 19147 . - 2 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 18628 18799 . - . ID=g1374.t1.exon3;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 18628 18799 . - 0 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 18321 18460 . - . ID=g1374.t1.exon4;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 18321 18460 . - 2 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 18067 18174 . - . ID=g1374.t1.exon5;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 18067 18174 . - 0 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 17705 17802 . - . ID=g1374.t1.exon6;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 17705 17802 . - 0 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 17284 17558 . - . ID=g1374.t1.exon7;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 17284 17558 . - 1 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 16879 17066 . - . ID=g1374.t1.exon8;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 16879 17066 . - 2 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 16472 16601 . - . ID=g1374.t1.exon9;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 16472 16601 . - 0 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . exon 15834 16348 . - . ID=g1374.t1.exon10;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . CDS 16194 16348 . - 2 ID=cds.g1374.t1;Parent=g1374.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 15834 16193 . - . ID=g1374.t1.utr3p1;Parent=g1374.t1 #PROT g1374.t1 g1374 MSNPFTFDVNEAARIHAAAVTRNYSVQPRLEYRTVSGVNGPLVILDNVKFPKFAEIVNLTLADGTRRSGQVLEVSGNKAVVQVFEGTSGIDAKHTTCEFTGDILRQPVSEDMLGRIFNGSGKPIDKGPNVLAEDYLDIQGQPINPFTRIYPEEMIQTGISAIDTMNSIARGQKIPIFSAAGLPHNDIAAQICRQAGLVKKAHNKGVFDDHEDNFAIVFAAMGVNMETARFFKQDFEENGSMERVTLFLNLANDPTIERIITPRLALTTAEYYAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQVYPPINVLPSLSRLMKSAIGEGMTRTDHSDVSNQLYANYAIGKDVQAMKAVVGEEALTPEDLLYLEFLEKFEKGFIAQGQYEARTIFDSLEIGWNLLRIFPKELLKRIPEKVLAEFYSRDTRMPGGLKD* # PASA_UPDATE: g1378.t1, single gene model update, valid-1, status:[pasa:asmbl_9036,status:12],[pasa:asmbl_9037,status:12],[pasa:asmbl_9040,status:12], valid-1 NODE_71_length_44790_cov_41.7412 . gene 29890 41625 . - . ID=g1378;Name=g1378.t1 NODE_71_length_44790_cov_41.7412 . mRNA 29890 41625 . - . ID=g1378.t1;Parent=g1378;Name=g1378.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 41369 41625 . - . ID=g1378.t1.utr5p1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 41053 41625 . - . ID=g1378.t1.exon1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 41053 41368 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 40229 40808 . - . ID=g1378.t1.exon2;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 40229 40808 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 39778 40025 . - . ID=g1378.t1.exon3;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 39778 40025 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 39522 39614 . - . ID=g1378.t1.exon4;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 39522 39614 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 39066 39190 . - . ID=g1378.t1.exon5;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 39066 39190 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 38325 38822 . - . ID=g1378.t1.exon6;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 38325 38822 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 37833 38114 . - . ID=g1378.t1.exon7;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 37833 38114 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 36239 37679 . - . ID=g1378.t1.exon8;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 36239 37679 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 35829 35979 . - . ID=g1378.t1.exon9;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 35829 35979 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 35548 35598 . - . ID=g1378.t1.exon10;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 35548 35598 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 35245 35427 . - . ID=g1378.t1.exon11;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 35245 35427 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 34666 35077 . - . ID=g1378.t1.exon12;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 34666 35077 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 34305 34364 . - . ID=g1378.t1.exon13;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 34305 34364 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 33989 34120 . - . ID=g1378.t1.exon14;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 33989 34120 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 33381 33565 . - . ID=g1378.t1.exon15;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 33381 33565 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 33060 33144 . - . ID=g1378.t1.exon16;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 33060 33144 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 32669 32887 . - . ID=g1378.t1.exon17;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 32669 32887 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 31343 32412 . - . ID=g1378.t1.exon18;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 31343 32412 . - 0 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 30865 30998 . - . ID=g1378.t1.exon19;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 30865 30998 . - 1 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 30438 30605 . - . ID=g1378.t1.exon20;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 30438 30605 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . exon 29890 30227 . - . ID=g1378.t1.exon21;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . CDS 30016 30227 . - 2 ID=cds.g1378.t1;Parent=g1378.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 29890 30015 . - . ID=g1378.t1.utr3p1;Parent=g1378.t1 #PROT g1378.t1 g1378 MSAATPPNNATGGVLSAALRSNIVAGGVDERVEVNQRHLIDKILARYSAEHTIFRELLQNSNDAGATHAEIEFVCAPGNRKAMSVVYRNNGRPFRKEDWGRLKKIAEGNPDENKIGFFGVGFYSVFSVSEEPLVVSGDSCMAFHWKGDQLYSTVGTLPAEMKSRLRMDTPAAAPPPSPSPSPSPSPSPSSSQSTPSAASSSAALRHAMSPPPSNSPPWTCFVLDGREQMDLPEMHSFCRFLAGCLTFARCLSHVRVLVAEAGSGRSPGAIIDSFGVGKTETPQRALSSGALRGAKLSGRLHPSDKQLSQRLFRPSESLEIGSMTLAVAVGESQGNDHVPGGRPAADQGQSVALRTVRLSAAAEASQMTAAAQGTLSFASKMERVTKKHPPKTVDVRCAYLAFDDCAGDSPSDGIATEYLSSALPFPSGGRIFIGFPTHQTTGVCVHIESQVIPTVERESIDFVDPILCRWNFELLSLAGLALRAAYEEELSAIASAWASLGLSPSAGSHVADEIVAAATSLAKGISAVLFGEAQVESKSANRKKQLPASQKGLDASEEDQEKKVIAMKLLIRKWRHVALTFSGCDAGNRSKPPPTTPSPYVGDAIRHSFFACMGDLQPPKVMTTRHGAVAASAAFSAGSTGIAEFVRTSVPIVLGTSVDEAGASGGVSVGAAVSSNTANATAGILGEMRLRGLLPPIGLEQLVAELSSRSIDAQECVRLIRWCIRACRGEVPDDGSSVAHGLYAGGKTVRAEWLKRIFGACVVTCAAADSASALSREDPPPVPLTFYTRYTLPSKIPPGLPVPPTTFPSEISQHFGKGELGYDFFVPFWRELGIGEWAVYLASVAVNQQRGMAPPQYRSPTASGVTGGSETAPGEVQHSHVPRAPADTTTQQMAPMGTASQSAAVIPAPVPSQATGVTRGQNAVTAAVTAPVTAPVAGAHQGASSGPTAAVNSKGRSAQGISPPGADGCDAPLTHHDVWERILVAMAKMRQSSSSNELAAVRDALAAVRCIPTESHGLCVASAVHVRAVDMFEDVPRVAESVERRCGRDFIVMLGVRERIDLSVIFTRLDSHLGWDAEKLVRFLASQQGTFSKDEWSRLRRTAFLPCETEQDRADALAREAEEQKAGWGGWFVGMAKSVIASGAGDVSVSATDAKGVARLKCMPSALYFPTAESRALSLPVLHWRSRLRQGTAEAKFLSALGLKVHPSLDDLIVKAGLGESEGVKHAALCYLAQHMEEFYAAEYRPASVDVPIIPCKDFSKSAEGLPSLGLPTECFVSPSAAVLGFKVVREDVTRQATSLGVREHPHGAALVKALSSRLPDNKSASSVFAYLASRQHEFGRAEWETIRRLAFIPVNARAIPARQASAASAVPPRLAPPPSASGPPPYSALPPPPQSEFVHMEPYRVCFASTRGDGLAEGAGGSQSGRSLAALLFPCVDFGQQANLFLRGCGVRDEPSPAEVAKEIVGRTGEAQRILNELGVDEYLGVLRLIAVSAASFPSSLKEEMQKSAFLLGFTLRDDDPPEGTQQAASTSADASDIRIGLVHSLYRARDVSLVDDNVLRKAFNPPCAPMDSLLEGFYEGLGCKWISSEAATTTRPTGQVTLSESSKALQAKIRQRAPVFLYEGHRMRPDAKKGAEKVLQSIEVREFPRIDRHVTFRSSSNTRVLQTTACVVVAKEIAPLLGPASKAMAASQPVLCVTRDMDLYDVGLAMAGVIFKRPAMNDGFILSTLLQTSLANLRNKGFPVDRILADQVVVMQGPGGSSTQRPPDAPATVTQKVPPAQQELVVPAASAAPPSVPGSHVTPRDPDAAKAMAYLLDAFPDCDPEYLVSLLAALKNNVDAATESLLRGYPKVSKLPRDDAKQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQPQQQGGKVADEGSAKPLPSAPTTAPNTAATPTLSPAPKGPPGTGSGLFDSIGGFFRGRQGSPVNAQQPPSQPGVGQSSRGNRSGNDPSSTVCPLPPAGRSGGGNGGGNGGGNGGGNGAPMTDAALDDALERSAKGCKPFNGTNYLSGGFNRVLPSETSCDVMEPQNLTLAARFDRIPVYLHVNTPHDVIVQNAAVIECFVGLVLRLGSVFRVPQDSLHVFYDASGRTIAFNGGGSLFFNVYEFITRRQYVGVSSDGAVSPSQGAYIFWFFTFSHELAHNFESPHNQVFASYFKAYSERYLPSFVAVMASMGMPIDGSGEPL* # ORIGINAL: g1369.t1 original gene structure, not modified by PASA NODE_71_length_44790_cov_41.7412 AUGUSTUS gene 260 2691 . - . ID=g1369;Name=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS mRNA 260 2691 . - . ID=g1369.t1;Parent=g1369;Name=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 2435 2691 . - . ID=g1369.t1.exon1;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 2435 2691 . - 0 ID=cds.g1369.t1;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 2160 2241 . - . ID=g1369.t1.exon2;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 2160 2241 . - 1 ID=cds.g1369.t1;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 714 1721 . - . ID=g1369.t1.exon3;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 714 1721 . - 0 ID=cds.g1369.t1;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 260 394 . - . ID=g1369.t1.exon4;Parent=g1369.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 260 394 . - 0 ID=cds.g1369.t1;Parent=g1369.t1 #PROT g1369.t1 g1369 MTSAVISTVTTALLPSVSPSPSASPDPYVPYIPFDDNDNAAAKRIHEHFLLGMYAAAAFTTLVFAATTKRRHFRKAVWSGYPGIPIPFNFLEGRHNRWAVGVGFGATANSILQTYQNSYQLVGDSQYSQYLLVGTILRVAATFYPVFLCVDRATSPLGAVLGLAHVCVFIAEQFWAIVSYEIDTPLVVRALTAVPTLICLFFLFAFFVHSLMLSLRRLFGANGSSRVTLASIVEEHSHPTRKTPAIVQVPVDATGYTQLHDEDETNGSTTPTAAGHETYARPDDDGTDSAEDTGLVFDGCADHVRSLLSPHALFINVSADPDDLLQRSSSSVTCTRRRRNSSVSSASTHYGTGTHNDALQPAPSESVLAVSGVRRQPESHALEKRLSWIAGVAHRVYQPIPSFRYSGRQVATAITSTLMLYQAFVFSMSSVADIVALIDVVLGDSDGTTKSLVSVHTREKIVNLTRGGLVLSLCVALITTLIFQLFMLRSYRK* # ORIGINAL: g1377.t1 original gene structure, not modified by PASA NODE_71_length_44790_cov_41.7412 AUGUSTUS gene 23798 29495 . + . ID=g1377;Name=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS mRNA 23798 29495 . + . ID=g1377.t1;Parent=g1377;Name=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 23798 23884 . + . ID=g1377.t1.exon1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 23798 23884 . + 0 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 24049 24541 . + . ID=g1377.t1.exon2;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 24049 24541 . + 0 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 24808 25023 . + . ID=g1377.t1.exon3;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 24808 25023 . + 2 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 25469 25535 . + . ID=g1377.t1.exon4;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 25469 25535 . + 2 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 25678 25809 . + . ID=g1377.t1.exon5;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 25678 25809 . + 1 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 26228 26693 . + . ID=g1377.t1.exon6;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 26228 26693 . + 1 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 26987 27100 . + . ID=g1377.t1.exon7;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 26987 27100 . + 0 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 27452 27579 . + . ID=g1377.t1.exon8;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 27452 27579 . + 0 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 27910 28723 . + . ID=g1377.t1.exon9;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 27910 28723 . + 1 ID=cds.g1377.t1;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 28908 29495 . + . ID=g1377.t1.exon10;Parent=g1377.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 28908 29495 . + 0 ID=cds.g1377.t1;Parent=g1377.t1 #PROT g1377.t1 g1377 MAGNAKPSPQAFLDWMVAIGSAYERSAAEGEHAVGMFIRHYLHIYATALRADAREVALGNDIDFGRFTCSTLDDNNGILRTMRVYNMSEESARVVGVYTFPPMPGLTLDVGNLGLVKSHSHAHIAPSDGGDANIRRRSCVELRLRFNAPQQTGLHHTHLFVSMRDGSVVCRKILALVARADAQRGLNPSAAHFVPASASIRGRKPATVPIYVRSDLPPAPAQGEPLEHLQVIPLPDEGARGRLALLTPLSASNYELFFATLLEVEDLQMQKDIRAYDMHYAALSLDKSQRQTAFILHVPGLLESRPPVTYGDVVMIEAAGVHPILYEGRVYRIDRKSERLWLLVGSNGCHPHTALRFTVRFAVNRHPIYEMRRAMRSMSVLLHPPGHQPVASQQVHALVDGVSGHEVPSNFALRRLFPTAADFNTPWREGMAIGIKTPNFPFDWDQLKAVQAIVDWDGPQQLGVAPFVLHGPPGTGKTCTIVEAVAQIIARNPKARVLCVGPSNTAADVVCSRLAARLADTFQTEPNLMLRLNSHTRFVQEVPIALLKFCAMDAASFFTVPAMTTLVGHRIVVATCISAGLLVSAGLSACHFDYVFVDECAQATEPEVLVPLSLAGPKCKVVLSGDHSQLGPSIRSNACIARGLGTSLQERLMRLYVEIEWNKPTAHCPHVALRKNYRSDGPMVSVPSALFYGGQIEVAPDGCALAAQLPWLPNQAFPMLFYSVEGEDIRQGDSLVSFNNPLEAIVIADIVERIFRSNVSRDFDANSGSAAHVQGDDMSGVVTNDTVTAAVRRDGVDAPLVQTDIGVISPFRAQVKSLRQLLRNRNLGAVDVGTVEDYQGQERKIVVLSTVRSQSTWLAYDRRSGMGLIGNPKRFNVGITRARSLLVAVGNPRILCRDANWRAFISHCARNSSVMGADCGDILAMCDAAAEKATASVQRMDSLAGGPASMASASRADALLASLESTRRDAETMATLDSSRWLGRRAGGSGGIDDDGGNGYPILLPGDLDEDGSYTMDDDSDLFFSDDKEWRIVM* # ORIGINAL: g1376.t1 original gene structure, not modified by PASA NODE_71_length_44790_cov_41.7412 AUGUSTUS gene 21440 21798 . - . ID=g1376;Name=g1376.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS mRNA 21440 21798 . - . ID=g1376.t1;Parent=g1376;Name=g1376.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 21671 21798 . - . ID=g1376.t1.exon1;Parent=g1376.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 21671 21798 . - 0 ID=cds.g1376.t1;Parent=g1376.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS exon 21440 21560 . - . ID=g1376.t1.exon2;Parent=g1376.t1 NODE_71_length_44790_cov_41.7412 AUGUSTUS CDS 21440 21560 . - 1 ID=cds.g1376.t1;Parent=g1376.t1 #PROT g1376.t1 g1376 MVSGMIRAALQTKEIYPLLGIVGGALMIASTMIVHSARQPDIVWKHGSNPYPWLAQKDKPDYFFIPHALDESHKIPFEKRTH* # PASA_UPDATE: g1370.t1, single gene model update, valid-1, status:[pasa:asmbl_9042,status:12], valid-1 NODE_71_length_44790_cov_41.7412 . gene 4557 5987 . + . ID=g1370;Name=g1370.t1 NODE_71_length_44790_cov_41.7412 . mRNA 4557 5987 . + . ID=g1370.t1;Parent=g1370;Name=g1370.t1 NODE_71_length_44790_cov_41.7412 . five_prime_UTR 4557 4686 . + . ID=g1370.t1.utr5p1;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . exon 4557 4740 . + . ID=g1370.t1.exon1;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . CDS 4687 4740 . + 0 ID=cds.g1370.t1;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . exon 5021 5212 . + . ID=g1370.t1.exon2;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . CDS 5021 5212 . + 0 ID=cds.g1370.t1;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . exon 5864 5987 . + . ID=g1370.t1.exon3;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . CDS 5864 5977 . + 0 ID=cds.g1370.t1;Parent=g1370.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 5978 5987 . + . ID=g1370.t1.utr3p1;Parent=g1370.t1 #PROT g1370.t1 g1370 MAILLTASITSALNMPILASRFAMATVVLMFDVFDLTAPYLTSCRESDIDGLMNPPTGRRFKSSCRYNSLGMAGAVIVLVAAIICVLFVGTEFDHHLPNNQVTSINNNNSDSRQDASAN* # PASA_UPDATE: g1373.t1, single gene model update, valid-1, status:[pasa:asmbl_9034,status:12], valid-1 NODE_71_length_44790_cov_41.7412 . gene 12746 15566 . - . ID=g1373;Name=g1373.t1 NODE_71_length_44790_cov_41.7412 . mRNA 12746 15566 . - . ID=g1373.t1;Parent=g1373;Name=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 15422 15566 . - . ID=g1373.t1.exon1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 15422 15566 . - 0 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 15245 15314 . - . ID=g1373.t1.exon2;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 15245 15314 . - 2 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 15081 15133 . - . ID=g1373.t1.exon3;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 15081 15133 . - 1 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 14821 14949 . - . ID=g1373.t1.exon4;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 14821 14949 . - 2 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 14454 14521 . - . ID=g1373.t1.exon5;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 14454 14521 . - 2 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 14174 14272 . - . ID=g1373.t1.exon6;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 14174 14272 . - 0 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 13834 13983 . - . ID=g1373.t1.exon7;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 13834 13983 . - 0 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 13514 13622 . - . ID=g1373.t1.exon8;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 13514 13622 . - 0 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 13110 13243 . - . ID=g1373.t1.exon9;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 13110 13243 . - 2 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . exon 12746 12913 . - . ID=g1373.t1.exon10;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . CDS 12788 12913 . - 0 ID=cds.g1373.t1;Parent=g1373.t1 NODE_71_length_44790_cov_41.7412 . three_prime_UTR 12746 12787 . - . ID=g1373.t1.utr3p1;Parent=g1373.t1 #PROT g1373.t1 g1373 MPIKVASEPAFVLTMATSMEGDTGGTLTTCHTQQPSAVTHSHTTFTAPCASLGSKNDWVTLNVGGKLFSTTRTTLCRDPNSMLARMFSSDVWHSTVDSNGAFLIDRSPEYFEPLLNFLRHGRLILNEGVNPDGVLEEARFFTIESAVECVEAIIKLRTPIPDEEKPLGRRKLMKALLMTGSSEGIRCQAMNFENADLSRLDLRNINFNMANLKNADLSMCNLERCKFDNADLTGCRMDGAKLQGTSFCRAILANASVRKCDFEDPARLLAVSMEGAILKGANLEESNMSAVNLRVASFRGASLRHVSLRGANLAGADLQDCDMTGCDLQDANVRGINTVGAVFHDLPALVLLSQTMYTRW* # ORIGINAL: g13059.t1 original gene structure, not modified by PASA NODE_4009_length_2359_cov_29.7439 AUGUSTUS gene 296 911 . + . ID=g13059;Name=g13059.t1 NODE_4009_length_2359_cov_29.7439 AUGUSTUS mRNA 296 911 . + . ID=g13059.t1;Parent=g13059;Name=g13059.t1 NODE_4009_length_2359_cov_29.7439 AUGUSTUS exon 296 385 . + . ID=g13059.t1.exon1;Parent=g13059.t1 NODE_4009_length_2359_cov_29.7439 AUGUSTUS CDS 296 385 . + 0 ID=cds.g13059.t1;Parent=g13059.t1 NODE_4009_length_2359_cov_29.7439 AUGUSTUS exon 627 911 . + . ID=g13059.t1.exon2;Parent=g13059.t1 NODE_4009_length_2359_cov_29.7439 AUGUSTUS CDS 627 911 . + 0 ID=cds.g13059.t1;Parent=g13059.t1 #PROT g13059.t1 g13059 VVADFVSVFRMLQPELYSHFEEEELEPNEWAVSWLQFLFARELPMRQLLRLWDTYFSLGSDLSAGFDLHFYVCLAVLDHCKEDLEELDYSDIKAYLQRLPAVEMDQILAHAKSIREDSIARKLV* # PASA_UPDATE: g13060.t1, single gene model update, valid-1, status:[pasa:asmbl_6850,status:12], valid-1 NODE_4009_length_2359_cov_29.7439 . gene 1375 2070 . - . ID=g13060;Name=g13060.t1 NODE_4009_length_2359_cov_29.7439 . mRNA 1375 2070 . - . ID=g13060.t1;Parent=g13060;Name=g13060.t1 NODE_4009_length_2359_cov_29.7439 . five_prime_UTR 2069 2070 . - . ID=g13060.t1.utr5p1;Parent=g13060.t1 NODE_4009_length_2359_cov_29.7439 . exon 1375 2070 . - . ID=g13060.t1.exon1;Parent=g13060.t1 NODE_4009_length_2359_cov_29.7439 . CDS 1805 2068 . - 0 ID=cds.g13060.t1;Parent=g13060.t1;5_prime_partial=true NODE_4009_length_2359_cov_29.7439 . three_prime_UTR 1375 1804 . - . ID=g13060.t1.utr3p1;Parent=g13060.t1 #PROT g13060.t1 g13060 GAATTTTGARNTHNATHETDRLIEIQKSEIQRLRDRIREIEAGFQRPSSTGRLMPMTSAEVYAAADRDSPSPMVAAPSSPDKATLVR* # ORIGINAL: g13751.t1 original gene structure, not modified by PASA NODE_905_length_16015_cov_55.2366 AUGUSTUS gene 13545 14429 . + . ID=g13751;Name=g13751.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS mRNA 13545 14429 . + . ID=g13751.t1;Parent=g13751;Name=g13751.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 13545 14429 . + . ID=g13751.t1.exon1;Parent=g13751.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 13545 14429 . + 0 ID=cds.g13751.t1;Parent=g13751.t1 #PROT g13751.t1 g13751 MGSSRKCIYEDFSQVKHADLRLKAVVKRLMESKDAPKMCSLFAWGRMTITIKDAQGTTVELWKPKRCDIIAVFAYVHMHWRTLFQSLPGYIYLYEDASRLHQIFTTKLTAPEDSFVLIQEDLDRYWGVHKRNLCPALRRQRAPGAMMHPMSTQMSEYAPVSCQPSFEYGVNPFEALEVLATSVLAAAKMSVVAHEKSPVAPALLNKPQTTAPVNIRPHQYLVPTTAQAASQPPVGASLKIKSSIAPTPVYHPYKIPIQPRVIAAAPVQSAIPDIAQQMKEPLAVGGGCWRPWHM* # ORIGINAL: g13748.t1 original gene structure, not modified by PASA NODE_905_length_16015_cov_55.2366 AUGUSTUS gene 189 4730 . - . ID=g13748;Name=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS mRNA 189 4730 . - . ID=g13748.t1;Parent=g13748;Name=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 4665 4730 . - . ID=g13748.t1.exon1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 4665 4730 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 4321 4392 . - . ID=g13748.t1.exon2;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 4321 4392 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 3729 4106 . - . ID=g13748.t1.exon3;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 3729 4106 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 3392 3568 . - . ID=g13748.t1.exon4;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 3392 3568 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 2914 3075 . - . ID=g13748.t1.exon5;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 2914 3075 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 2450 2636 . - . ID=g13748.t1.exon6;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 2450 2636 . - 0 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 598 2167 . - . ID=g13748.t1.exon7;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 598 2167 . - 2 ID=cds.g13748.t1;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 189 320 . - . ID=g13748.t1.exon8;Parent=g13748.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 189 320 . - 1 ID=cds.g13748.t1;Parent=g13748.t1 #PROT g13748.t1 g13748 MEPQRLVDYFAVCGVVQVVEDKREWGVRVGLLKSYPVVIPNDPFDENAVCMFSFPSGFHLSKASQVDAQKTHFHPFVITKEDGSRIRGACLVHMRKSPEVTSAVARRAAILSESRRGSCYSQLCASQSELGRQLQRERAVANGTEMTGYEPCYSVSCPLLRRPSDLERLAMEVASGQPPEDVYAPEAIVLLSRQPFMKAQREFLLQLHEVATWEGPHPQAPLPLESYIHYLMCCVPIPSPGTTVEFEVLRPMSLSKPNATDLPLHDFSLEPLFGFGIDAVIDLVESILLERKLLVRSRDLERIATVLEGILCLIFPFSWNHVYVPVLGEGLLHFLEAPVPYIMGVPHGLLQDADLVGLDDVVFVDLDAMTVDIKDPLPALPERDSLAAKLTSFLAKSHEYAKTGMSLSVPSSGSQAKLDGFPNDAIRWVFADYFVGLFMEYASFLHMPRHKEGWEDDAIRMGLRLFDRIAFLSDQPPDSVPFFTRFVGTQAFSSFVDAKISSIAVTDEEPEPAVEFMDGRIEHKRKRAGFIMTPSFRHQRATSVSSFTGRKIVAPKLTPLQSKAIEEHPDEDNASESEGTDQATALTTSAKKKEASPTIALHAAGGRSDNPFGSLDFSGLPMFPVSPVVPSTNPVAPPSPSLSDAPTPRTRGSILGGASGGDGRRTSLLGLLSRQKRRPSVIPTVRPVGDGADVAMTSLAAPSIVLAGPSSSSAAPAAGADQSQFVAAVLDECSKVIKQLIMSKFADGASTPASMASTDDLTSVGRPDRSERAGNKGDSGVADGGEDASQSSPAAQKKVPPRTSIIATEKVIAEITASQADSLVTMLCEIIEQIFNYGLRLTEGTGRGRAAFWSYVAQCDLPDGQEAADDRTRILRLEDLKTDVGRGRSFIRLAVEKKMLADHLEECLKDNTLL # PASA_UPDATE: g13752.t1, single gene model update, valid-1, status:[pasa:asmbl_9937,status:12], valid-1 NODE_905_length_16015_cov_55.2366 . gene 15471 16015 . - . ID=g13752;Name=g13752.t1 NODE_905_length_16015_cov_55.2366 . mRNA 15471 16015 . - . ID=g13752.t1;Parent=g13752;Name=g13752.t1 NODE_905_length_16015_cov_55.2366 . five_prime_UTR 15997 16015 . - . ID=g13752.t1.utr5p1;Parent=g13752.t1 NODE_905_length_16015_cov_55.2366 . exon 15471 16015 . - . ID=g13752.t1.exon1;Parent=g13752.t1 NODE_905_length_16015_cov_55.2366 . CDS 15781 15996 . - 0 ID=cds.g13752.t1;Parent=g13752.t1 NODE_905_length_16015_cov_55.2366 . three_prime_UTR 15471 15780 . - . ID=g13752.t1.utr3p1;Parent=g13752.t1 #PROT g13752.t1 g13752 MRSLGLTLKGGLRMQGDYKQQGGTMVIASKGADGKPEVTYMHRDENAFGHAPINSVLEMVGVDKVEFQNRN* # ORIGINAL: g13750.t1 original gene structure, not modified by PASA NODE_905_length_16015_cov_55.2366 AUGUSTUS gene 10693 11654 . - . ID=g13750;Name=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS mRNA 10693 11654 . - . ID=g13750.t1;Parent=g13750;Name=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 11472 11654 . - . ID=g13750.t1.exon1;Parent=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 11472 11654 . - 0 ID=cds.g13750.t1;Parent=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 11212 11275 . - . ID=g13750.t1.exon2;Parent=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 11212 11275 . - 0 ID=cds.g13750.t1;Parent=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 10693 10958 . - . ID=g13750.t1.exon3;Parent=g13750.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 10693 10958 . - 2 ID=cds.g13750.t1;Parent=g13750.t1 #PROT g13750.t1 g13750 MPSHGKTDRESPVTAFLTTETEKRRRKQSNPLRAIQPKERTARQVPIEERTVVLRFLKRAEEPSDASDKFADNGKAKRSRPRGQPLDISGMPMLERLSTEEQKLSSIVRVTPEQYLKIKETMVGEAKKVFVLKKSHATRLFRIDSNKTGRLYEYFVDMGWIKNGSTPITA* # ORIGINAL: g13749.t1 original gene structure, not modified by PASA NODE_905_length_16015_cov_55.2366 AUGUSTUS gene 7209 10382 . + . ID=g13749;Name=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS mRNA 7209 10382 . + . ID=g13749.t1;Parent=g13749;Name=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 7209 7236 . + . ID=g13749.t1.exon1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 7209 7236 . + 0 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 7338 7408 . + . ID=g13749.t1.exon2;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 7338 7408 . + 2 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 7551 7639 . + . ID=g13749.t1.exon3;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 7551 7639 . + 0 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 7853 8032 . + . ID=g13749.t1.exon4;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 7853 8032 . + 1 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 8242 8403 . + . ID=g13749.t1.exon5;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 8242 8403 . + 1 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 8584 8618 . + . ID=g13749.t1.exon6;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 8584 8618 . + 1 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 8844 9122 . + . ID=g13749.t1.exon7;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 8844 9122 . + 2 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 9468 9602 . + . ID=g13749.t1.exon8;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 9468 9602 . + 2 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 9782 10029 . + . ID=g13749.t1.exon9;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 9782 10029 . + 2 ID=cds.g13749.t1;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS exon 10257 10382 . + . ID=g13749.t1.exon10;Parent=g13749.t1 NODE_905_length_16015_cov_55.2366 AUGUSTUS CDS 10257 10382 . + 0 ID=cds.g13749.t1;Parent=g13749.t1 #PROT g13749.t1 g13749 MKLFSLLVFAAAIGIALAACPTQDTLQTACSKSVDKSCCDNVKTLAATNCCQNDLGCAAYTTGLKLTCGVNGLLEAAAACATFDYASVVTNCAKPGVACCNTLVNQVRGNACCGDLCKAATSGLADKCVKLLNCISFDYTGLFKSCSDGTSKACCDALTPKLSSECCDDACQAGLTKFTSVCNAAAGVAPTCAGRATDIANKITAVSTACTGAVCSENCKSTSTGLFKDPCFQKFCGQKCNDDSWVNVIPTACKIKASLGGLSENSTFIKKIVQRVLSNTANNIIDLLDQGAKIDIPALAAGAFNGKNISAVIAKADALAARLIFQGVKGAGAASALFADIVSLVPHGLTFNETVSITIKLTKTLIEKGKRLCAARADTLDDTSDTEFVQLECPKHGLTVGADGSVTFGVKGFSAYTIVSTTDPDGSAPGFAPTLVTIGAAIVALVAAFM* # PASA_UPDATE: g7296.t1, single gene model update, valid-1, status:[pasa:asmbl_4271,status:3], valid-1 NODE_241_length_29620_cov_45.5219 . gene 7036 8549 . - . ID=g7296;Name=g7296.t1 NODE_241_length_29620_cov_45.5219 . mRNA 7036 8549 . - . ID=g7296.t1;Parent=g7296;Name=g7296.t1 NODE_241_length_29620_cov_45.5219 . five_prime_UTR 8338 8549 . - . ID=g7296.t1.utr5p1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . exon 8238 8549 . - . ID=g7296.t1.exon1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . CDS 8238 8337 . - 0 ID=cds.g7296.t1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . exon 7945 8045 . - . ID=g7296.t1.exon2;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . CDS 7945 8045 . - 2 ID=cds.g7296.t1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . exon 7747 7835 . - . ID=g7296.t1.exon3;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . CDS 7747 7835 . - 0 ID=cds.g7296.t1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . exon 7549 7597 . - . ID=g7296.t1.exon4;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . CDS 7549 7597 . - 1 ID=cds.g7296.t1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . exon 7036 7413 . - . ID=g7296.t1.exon5;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . CDS 7303 7413 . - 0 ID=cds.g7296.t1;Parent=g7296.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 7036 7302 . - . ID=g7296.t1.utr3p1;Parent=g7296.t1 #PROT g7296.t1 g7296 MIRHWAFLVLGAVIVLLDTATVRAELTDGEYMDALALCQREGTCIKEIVFCELATFGICEPCQGLDRKAKSYCVKYGNAEPITCIGPNSTTIHVQQACPRAIHLERQRFLLFELMNILLLMASTMIVYFRRRVMEAKMMSRIQRHIGNP* # ORIGINAL: g7294.t1 original gene structure, not modified by PASA NODE_241_length_29620_cov_45.5219 AUGUSTUS gene 844 1740 . + . ID=g7294;Name=g7294.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS mRNA 844 1740 . + . ID=g7294.t1;Parent=g7294;Name=g7294.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 844 1248 . + . ID=g7294.t1.exon1;Parent=g7294.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 844 1248 . + 0 ID=cds.g7294.t1;Parent=g7294.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 1489 1740 . + . ID=g7294.t1.exon2;Parent=g7294.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 1489 1740 . + 0 ID=cds.g7294.t1;Parent=g7294.t1 #PROT g7294.t1 g7294 MASQPASAAEPIDNANGAVHHSDGESNGKDATNSNNYPSARRPSTRTTSESSDARTVAVPKRRPIIDVWRDVLVGDLDALRSAVACGFDLLSRDCAGRTVLHAAVTGPCATHAPMVRFLVSTNAGLVNVQDDMGQTALHLATARHNTEALLVLMEGGAIVNLLNAYRQSPLDVEPALRNIMLEHIQTAPSWVEDGMAPSCQICGNSFTALYRRVRVYV* # PASA_UPDATE: g7299.t1, single gene model update, valid-1, status:[pasa:asmbl_4268,status:3], valid-1 NODE_241_length_29620_cov_45.5219 . gene 16044 22768 . + . ID=g7299;Name=g7299.t1 NODE_241_length_29620_cov_45.5219 . mRNA 16044 22768 . + . ID=g7299.t1;Parent=g7299;Name=g7299.t1 NODE_241_length_29620_cov_45.5219 . five_prime_UTR 16044 16183 . + . ID=g7299.t1.utr5p1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 16044 16359 . + . ID=g7299.t1.exon1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 16184 16359 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 16602 16824 . + . ID=g7299.t1.exon2;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 16602 16824 . + 1 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 16979 17141 . + . ID=g7299.t1.exon3;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 16979 17141 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 17431 17466 . + . ID=g7299.t1.exon4;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 17431 17466 . + 2 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 17781 17842 . + . ID=g7299.t1.exon5;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 17781 17842 . + 2 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 18100 18402 . + . ID=g7299.t1.exon6;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 18100 18402 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 18646 18778 . + . ID=g7299.t1.exon7;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 18646 18778 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 18948 19585 . + . ID=g7299.t1.exon8;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 18948 19585 . + 2 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 19749 19967 . + . ID=g7299.t1.exon9;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 19749 19967 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 20139 20192 . + . ID=g7299.t1.exon10;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 20139 20192 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 20351 20524 . + . ID=g7299.t1.exon11;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 20351 20524 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 20839 20999 . + . ID=g7299.t1.exon12;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 20839 20999 . + 0 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 21366 21580 . + . ID=g7299.t1.exon13;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 21366 21580 . + 1 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 21874 22050 . + . ID=g7299.t1.exon14;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 21874 22050 . + 2 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . exon 22238 22768 . + . ID=g7299.t1.exon15;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . CDS 22238 22431 . + 2 ID=cds.g7299.t1;Parent=g7299.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 22432 22768 . + . ID=g7299.t1.utr3p1;Parent=g7299.t1 #PROT g7299.t1 g7299 MAFPVTIQALQELVDPKNKAALDKLGGAEGIARKLRTDLKNGLGADQLTADSVASRKQQLGENVLPEVPTKSILSLVFEGLQDKTLIMLSVAAIISLILGMREDPRTGWIEGTAILAAVLLVVFVAAINDYQKEIQFRKLNAKNEAREIKVVRNGEQMQVPIAEILVGDVMELATGDILSADGVFVDGHTLKCDESGATGESDTIKKGLEDDPFFLSGTQVMEGVGKMLVVAVGPHSFNGKTLMSLRVESEDTPLQQKLEALAETIAYFGIITSTITLGVLCSKHVVLLMWGGEEFDSHVISAFVKYIITAITMLVVAVPEGLPLAVTMALAFSTMKMLEDHNLVRHLDACETMGGATNICSDKTGTLTQNKMSVVQGNVAGVQFEDAGISAKLRDRLPGAAVTSLSENIAINSTAYEVVTHEGKKDVVGSKTEVALLQFADAIGLDYRNVRTTGPKTVHLYPFSSKDKMMGVVIQKGDKHRLYVKGASEIVLARCSHILDASGNAVAISAEARAACEQQIETMATQALRTICLAYVDLKPRADYESMPAEGLIITGIVGIQDPVRPEVPDAVRRCQKAGIKVRMVTGDNITTAINIAKKCGIYAGGLAMEGPAFRKLTDKELEDVVPNLEVLARSSPTDKQILVRKLKEMGEIVAVTGDGTNDGPALKLAHVGFSMGITGTEVAKEASDIVLMDDNFSSIVAAVSWGRNVYDSIRKFLQFQLTVNIAAVALAFVGSITDEHGESPLKPVQLLWVNLIMDTMAALALATESPTPELLDRKPYGKTEGLITPMMWRNIIGQSIFQMFVNFGLLYYGHIAFGVPHHSVKHLTLFFNTFVMCQLFNEINARKIHGELNVFKGILSNGLFIGVMAFTLIMQYLIVQFGGTFVGTVPLTNHEWLMCIGIGALGIPVGFFLRLVPVARPPPPPVGKFSARRKWAAAINTVKTQESIVSFLRKPTKKSLSMSMSRRMSVSAR* # PASA_UPDATE: g7295.t1, single gene model update, valid-1, status:[pasa:asmbl_4270,status:12], valid-1 NODE_241_length_29620_cov_45.5219 . gene 2466 6379 . - . ID=g7295;Name=g7295.t1 NODE_241_length_29620_cov_45.5219 . mRNA 2466 6379 . - . ID=g7295.t1;Parent=g7295;Name=g7295.t1 NODE_241_length_29620_cov_45.5219 . exon 5348 6379 . - . ID=g7295.t1.exon1;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . CDS 5348 6379 . - 0 ID=cds.g7295.t1;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . exon 3297 4868 . - . ID=g7295.t1.exon2;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . CDS 3297 4868 . - 0 ID=cds.g7295.t1;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . exon 2466 3143 . - . ID=g7295.t1.exon3;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . CDS 2931 3143 . - 0 ID=cds.g7295.t1;Parent=g7295.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 2466 2930 . - . ID=g7295.t1.utr3p1;Parent=g7295.t1 #PROT g7295.t1 g7295 MSLGEAEYRAPPAYVGMALPSGWEEAWDPQRGKKYYIDHNSRTTSWVDPRDKYTKPLTFAECVGDELPYGWERDFDRSVGVYFIDHNTRTTQLEDPRGSWYAVQQEMLREFLDSTNRSLEAKKEMLVLKQRRLGIAEEEVAMLTKQLSRGAGPALTSFDPESIKRDVAAAKARVSRLRSEMESLSNAVEYEQEGMQILQGVNMKIESNPSYRIEDARAALAELAMMRDALEQHEQEKEDLRLLLNDLKMAIATENASKDGMGTTGTTSFVRKKKFSTMPTVRLQHGVTTLLDDGTGEEYAYNELERMRVKRQVLRWLGDNASEMRKEFGGHLARMLEVYAEDRELTADLDTLSDVIAPLWPGVAQFDALLDLHEAEEEQLRDLAQLAVGDGVPVEPIRGIFEKRSTSASGLAKHHQQQVAAMLRKASVSQIVIPAAPTGTATSTAAATAASVSSAQKSQSTCLEIMRKHDLELKRALDNAGNVIAKDVLASVLKDCQRSKAELRRGMREAARDMVHSAVTFLPHLFEAGTGESSTAVSRAGSTNSNASHGTTPVRDGDQSDSGSQLERRPSLTTPGSGPVHPEFAALAQQQQKRRSAPEAPSNTTSVNPSPRTSASSLGSPSSVRRATRLPPPPPSASRDVHVVPGRPRAMTALIPPPEAFAEPLGLDDLPPPPEDFFPQWKVPALETAPAAVAPAKPSRPSDHEISMIPETDLTSLPTAHRPGAQRILAPVASSGPIPSYSAAIAQLASSPSAAKARSAGVQLHSSKLGASAGANHGENSSALPGDIAGQSLSQSLNQSSLSQSLDQSSLSQSLNQSQGQGQNDRRTPQQTRLDIELELAMIRRDFERARGEMAHLETVRQKLLAEKVRLEELPDWMEDSHIQAMLEVDPSKCRTKNTLRRASMVRVTEIREKQRLTTDQMSFREKIAFFTTNGLAS* # ORIGINAL: g7302.t1 original gene structure, not modified by PASA NODE_241_length_29620_cov_45.5219 AUGUSTUS gene 28294 29289 . + . ID=g7302;Name=g7302.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS mRNA 28294 29289 . + . ID=g7302.t1;Parent=g7302;Name=g7302.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 28294 29289 . + . ID=g7302.t1.exon1;Parent=g7302.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 28294 29289 . + 0 ID=cds.g7302.t1;Parent=g7302.t1 #PROT g7302.t1 g7302 MSNIRTFLRSDSKQSASKSPYLAKASSSADAAQLMNNVEVGQESIELQDATEGDSSEDEKPEDVRLEINGKAGLPLSISGKESDVRSEWVQPSGIVPPPPPPAANESRMRPVIIAQTDDKESFRDAADRPPSAHKNLRRNAGQKGDGSQRMSTLSGNSTDQGEEDEEQIPDISLWERMPGWMHRVILSLVAAGIVMIPGVICDRFFPDVAIANASLFAWSVFAAFAVLSNVVALVLVVLIMRTIEANYKMKRAIYYYAIALYNPLQFMFTIGGIMADWNYTFDWRNLYRHVHCIYVLCCMQRHSATVSSFRACVLCSLFMFNARLTRFRVH* # PASA_UPDATE: g7297.t1, single gene model update, valid-1, status:[pasa:asmbl_4272,status:3], valid-1 NODE_241_length_29620_cov_45.5219 . gene 8727 10203 . - . ID=g7297;Name=g7297.t1 NODE_241_length_29620_cov_45.5219 . mRNA 8727 10203 . - . ID=g7297.t1;Parent=g7297;Name=g7297.t1 NODE_241_length_29620_cov_45.5219 . five_prime_UTR 9918 10203 . - . ID=g7297.t1.utr5p1;Parent=g7297.t1 NODE_241_length_29620_cov_45.5219 . exon 9630 10203 . - . ID=g7297.t1.exon1;Parent=g7297.t1 NODE_241_length_29620_cov_45.5219 . CDS 9630 9917 . - 0 ID=cds.g7297.t1;Parent=g7297.t1 NODE_241_length_29620_cov_45.5219 . exon 8727 9468 . - . ID=g7297.t1.exon2;Parent=g7297.t1 NODE_241_length_29620_cov_45.5219 . CDS 9151 9468 . - 0 ID=cds.g7297.t1;Parent=g7297.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 8727 9150 . - . ID=g7297.t1.utr3p1;Parent=g7297.t1 #PROT g7297.t1 g7297 MIEHKMEVHGLSMDVSANKANTTSSLTSTYPSPSCPTFPEFVYTIGCFDMLHPGHVKLFQRMRKFGRRLVIGIHDDASILALKSRVPIDSTATRAANVAKYADQVFVVAGTNPSEFIEKVVLENISMVGRENFSAVYIRGDDMPHFPGRQTVERYMRVLLLPYTQGVSSTYLRNQLLATPEGVHILKVREDEMNSSPISVW* # PASA_UPDATE: g7298.t1, single gene model update, valid-1, status:[pasa:asmbl_4267,status:3], valid-1 NODE_241_length_29620_cov_45.5219 . gene 12629 15459 . + . ID=g7298;Name=g7298.t1 NODE_241_length_29620_cov_45.5219 . mRNA 12629 15459 . + . ID=g7298.t1;Parent=g7298;Name=g7298.t1 NODE_241_length_29620_cov_45.5219 . five_prime_UTR 12629 12899 . + . ID=g7298.t1.utr5p1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 12629 12998 . + . ID=g7298.t1.exon1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 12900 12998 . + 0 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 13155 13340 . + . ID=g7298.t1.exon2;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 13155 13340 . + 0 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 13469 14218 . + . ID=g7298.t1.exon3;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 13469 14218 . + 0 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 14406 14945 . + . ID=g7298.t1.exon4;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 14406 14945 . + 0 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 15106 15227 . + . ID=g7298.t1.exon5;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 15106 15227 . + 0 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . exon 15384 15459 . + . ID=g7298.t1.exon6;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . CDS 15384 15432 . + 1 ID=cds.g7298.t1;Parent=g7298.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 15433 15459 . + . ID=g7298.t1.utr3p1;Parent=g7298.t1 #PROT g7298.t1 g7298 MMTMGKTKAPTSHNTTTGKRKLDSLVDITNTNTASHPSTKRRKPELLAESRGENWQANGENERPQSIDFDRFRCNETLDDEANEDVQRVAILPCKRSNSVVFVREEDLSAVRDGIMTSAGATVGATTTTTRKTTTTDKLVCMETLDSEEEEGDSVDDSGDRDICDVAMLPQEAIAADASTEQCTLAQPPQSPRVVMVDLTGETPPLGAVRSDAVPLMRRVSDAAESNPAPTPPRTIEAHRSRDLPTFKSAAHSLNCGSDARGEVSANRSYVDDADKENCSANEGAAEERKRCNFAPLSKHDNESRCFRKACQVCPRVRCVLAGVEDPSLDTPGSSAILCEMRAVQAEYLPREHYLRYHRHITDKMRRILVDWLVEVQISFKLCDETLFLAVSMVDRYLSKRRLPRDRLQLVGATALFIASKYEEVGPPTLGDFVYVCADSYSREEFKAMEQKMLSVLSYRVSAPTALFFLQSFAPILGAKKMQLMVAEYGLQLALLKYELTTCLATTLACAALVFAAHTTDDIALVRHAEKLSGAAHNELPGIVAAMKKSAASCKSTCLKAKFETNSKLNVSTIHFASICA* # PASA_UPDATE: g7301.t1, single gene model update, valid-1, status:[pasa:asmbl_4269,status:3], valid-1 NODE_241_length_29620_cov_45.5219 . gene 25284 27757 . + . ID=g7301;Name=g7301.t1 NODE_241_length_29620_cov_45.5219 . mRNA 25284 27757 . + . ID=g7301.t1;Parent=g7301;Name=g7301.t1 NODE_241_length_29620_cov_45.5219 . five_prime_UTR 25284 25408 . + . ID=g7301.t1.utr5p1;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . exon 25284 25518 . + . ID=g7301.t1.exon1;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . CDS 25409 25518 . + 0 ID=cds.g7301.t1;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . exon 25641 27009 . + . ID=g7301.t1.exon2;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . CDS 25641 27009 . + 1 ID=cds.g7301.t1;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . exon 27241 27757 . + . ID=g7301.t1.exon3;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . CDS 27241 27723 . + 0 ID=cds.g7301.t1;Parent=g7301.t1 NODE_241_length_29620_cov_45.5219 . three_prime_UTR 27724 27757 . + . ID=g7301.t1.utr3p1;Parent=g7301.t1 #PROT g7301.t1 g7301 MFATFALTILAIASAALVFKNAHTLRIWIKTLPRDVRGALYYIQILAVCFFLSLLRRTVVDIFRWQARKYPYKLALSSEKSRLTFAELDALSNRVARVAHAHGLGKGDVIALFMESSPEYVALWLGFAKAGVVSALINHNLRGPSLCHSITVAKARAVVYGRELYSAVDEVAPLIESTQPLYFAYGAADKGVGDAEGDYDLDGLIAKASSCAVPRVAGNMDDVLLYIYTSGTTGLPKAAVIRHGRYFHMCYSMRVMAGIAPDDIVYCSLPLYHSAGVVLGIGQCLLGGTGVHVRSKFSASRFWDECAAHKCTVIQYIGDICRFLLATPPTNGEKSHRVRLAVGNGMRPDMWTPFVERFNVREVREFYGSTEGNANLVNIDNRRGAVGFNSVILPWVYPVRLVRYDQESGTLIRDARGMCMRTSVGEPGELVGRIGTSSLRKYDGYVGQASGVDGVAKESSKIARDVAWKGDVYFRTGDILWQDEEGYLFFADRVGDTFRWKGENVATSEVEQAIRSVLGHDYSACVYGVEIPGCPGRAGMATVSAEGADGATTTPSRLDVDSREACERLARELCAKLPSLLPAYARPLFLRFTASQEMTGTFKVKKTQMQKEGYDPATVPSGECVCLIDYAANSVTPVTPGVVDKIASGAIRV* # ORIGINAL: g7300.t1 original gene structure, not modified by PASA NODE_241_length_29620_cov_45.5219 AUGUSTUS gene 23016 23912 . - . ID=g7300;Name=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS mRNA 23016 23912 . - . ID=g7300.t1;Parent=g7300;Name=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 23826 23912 . - . ID=g7300.t1.exon1;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 23826 23912 . - 0 ID=cds.g7300.t1;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 23640 23699 . - . ID=g7300.t1.exon2;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 23640 23699 . - 0 ID=cds.g7300.t1;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 23401 23462 . - . ID=g7300.t1.exon3;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 23401 23462 . - 0 ID=cds.g7300.t1;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 23247 23297 . - . ID=g7300.t1.exon4;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 23247 23297 . - 1 ID=cds.g7300.t1;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS exon 23016 23073 . - . ID=g7300.t1.exon5;Parent=g7300.t1 NODE_241_length_29620_cov_45.5219 AUGUSTUS CDS 23016 23073 . - 1 ID=cds.g7300.t1;Parent=g7300.t1 #PROT g7300.t1 g7300 MSDRKEEWGPRGLGSGNTDWQTGNEMEGKRESNQDAILNANRKAPGAGEHLLTGHQDTKRDIPNQIEQMSDPMPVERGHGMDPSKAERGYSAGTDDPSNLREKPR* # PASA_UPDATE: g8092.t1, single gene model update, valid-1, status:[pasa:asmbl_7454,status:12], valid-1 NODE_4588_length_1427_cov_31.0939 . gene 496 1197 . - . ID=g8092;Name=g8092.t1 NODE_4588_length_1427_cov_31.0939 . mRNA 496 1197 . - . ID=g8092.t1;Parent=g8092;Name=g8092.t1 NODE_4588_length_1427_cov_31.0939 . five_prime_UTR 1171 1197 . - . ID=g8092.t1.utr5p1;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . exon 1057 1197 . - . ID=g8092.t1.exon1;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . CDS 1057 1170 . - 0 ID=cds.g8092.t1;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . exon 724 848 . - . ID=g8092.t1.exon2;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . CDS 724 848 . - 0 ID=cds.g8092.t1;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . exon 496 544 . - . ID=g8092.t1.exon3;Parent=g8092.t1 NODE_4588_length_1427_cov_31.0939 . CDS 496 544 . - 1 ID=cds.g8092.t1;Parent=g8092.t1;3_prime_partial=true #PROT g8092.t1 g8092 MPVAVRHINDVKGRGLFALRDFKEGEDIFTEQPLVSAQFLWNELYGYAACHHCMRSLESPARMAERLSGIKGVRLPFNDRLRDDEGVSFVRCENCE # PASA_UPDATE: g11394.t1, single gene model update, valid-1, status:[pasa:asmbl_6930,status:3], valid-1 NODE_407_length_24427_cov_42.9239 . gene 5577 8695 . - . ID=g11394;Name=g11394.t1 NODE_407_length_24427_cov_42.9239 . mRNA 5577 8695 . - . ID=g11394.t1;Parent=g11394;Name=g11394.t1 NODE_407_length_24427_cov_42.9239 . five_prime_UTR 8594 8695 . - . ID=g11394.t1.utr5p1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 8360 8695 . - . ID=g11394.t1.exon1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 8360 8593 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 8098 8212 . - . ID=g11394.t1.exon2;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 8098 8212 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 7566 8008 . - . ID=g11394.t1.exon3;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 7566 8008 . - 2 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 7181 7339 . - . ID=g11394.t1.exon4;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 7181 7339 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 6769 6975 . - . ID=g11394.t1.exon5;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 6769 6975 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 6419 6572 . - . ID=g11394.t1.exon6;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 6419 6572 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 6136 6242 . - . ID=g11394.t1.exon7;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 6136 6242 . - 2 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . exon 5577 6021 . - . ID=g11394.t1.exon8;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . CDS 5770 6021 . - 0 ID=cds.g11394.t1;Parent=g11394.t1 NODE_407_length_24427_cov_42.9239 . three_prime_UTR 5577 5769 . - . ID=g11394.t1.utr3p1;Parent=g11394.t1 #PROT g11394.t1 g11394 MMLSRQKPAAAVRNESADAREKKKKKAPKLEDFLEARDYMGAITLLEFNRHSGNADPKTDQWIAYCAFHNSDYKKAMEEYQGVVKKGNCDPDVYTYLGCCYFFLGMYEEADEVAKKGSPTKLQNRLLFHLSHKFNDEKRLMTYHQALRDIVEDQLSLASIHYLRSHYQEAIDIYKRLLLENREFLALNVYIALCYYKLDYYDVSQEMLTVYLQHYPDSAIALNLKACNHFRLYNGKAAEAELKTLQDMASASFKFAEDLIKHNLVVFRNGEGALQILPPLIDVIPEARLNLVIYYLRQDDLLEAYNLLKDLEPTTPQEYILKGVVNAALGQEQDSTEHMKIAQQYFQLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSIKSYFYNDDTFNYNFAQAKAAVGNYKEAEEVFLLIQNERIKSEYTFLSWLARCHIMNRKPRLAWELYLKMETSSESFSLLQLIANDCYKMGQFYYAAKAFDVLERLDPNPEYWEGKRGACIGIFQQIIAGHEPRETLRDVLSMLRNTSNPQVEYIMRTMKKWAKDNRIPIGN* # ORIGINAL: g11392.t1 original gene structure, not modified by PASA NODE_407_length_24427_cov_42.9239 AUGUSTUS gene 370 1007 . - . ID=g11392;Name=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS mRNA 370 1007 . - . ID=g11392.t1;Parent=g11392;Name=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 838 1007 . - . ID=g11392.t1.exon1;Parent=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 838 1007 . - 0 ID=cds.g11392.t1;Parent=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 651 713 . - . ID=g11392.t1.exon2;Parent=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 651 713 . - 1 ID=cds.g11392.t1;Parent=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 370 484 . - . ID=g11392.t1.exon3;Parent=g11392.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 370 484 . - 1 ID=cds.g11392.t1;Parent=g11392.t1 #PROT g11392.t1 g11392 MDRSSEPLLVTVETAPGRESISSFSDQTTGAVVSYHGITYEVPLKKKATKVILNDISGIMHPGQLSAIMGSTGSGKTTLLDVLAGRKDPKYLRGRLLVDGAPQPEGFYRMSGYVVQ # ORIGINAL: g11396.t1 original gene structure, not modified by PASA NODE_407_length_24427_cov_42.9239 AUGUSTUS gene 10832 15135 . - . ID=g11396;Name=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS mRNA 10832 15135 . - . ID=g11396.t1;Parent=g11396;Name=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 15052 15135 . - . ID=g11396.t1.exon1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 15052 15135 . - 0 ID=cds.g11396.t1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 14586 14956 . - . ID=g11396.t1.exon2;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 14586 14956 . - 0 ID=cds.g11396.t1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 14315 14484 . - . ID=g11396.t1.exon3;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 14315 14484 . - 1 ID=cds.g11396.t1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 12161 14211 . - . ID=g11396.t1.exon4;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 12161 14211 . - 2 ID=cds.g11396.t1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 10997 11855 . - . ID=g11396.t1.exon5;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 10997 11855 . - 0 ID=cds.g11396.t1;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 10832 10872 . - . ID=g11396.t1.exon6;Parent=g11396.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 10832 10872 . - 2 ID=cds.g11396.t1;Parent=g11396.t1 #PROT g11396.t1 g11396 MVRVLAVAEKPSVASGIATILSDQRFQSRAGFSKYNRVFDFSCKMQNQDCDVAMTSVLGHLMSSDFPSGYRKWEAVNPIQLFEAPIKKEVTEKYEDIKRTLEREAKKVQWLVLFTDGDREGENIGFEIMSVCQAVNQKLRIWRAHFSAVTPRDIFAACANLAQPNQRISDAVDARSELDLRIGAAFTRFQTMRLRPVCADLNDKMISYGPCQFPTLGFVVDQYKRAAAFVPEDFWYIHMVYGDDRGGNPATFTWQRGRIFNHAVAVALYEICCADPTARVLAVDCKPRTKYRPIPFSTVELQKMASNILKMSSDTTMAVAEKLYNAGYISYPRTETDIFETSIDLAPLVSMQSRDPDWGGFASRYVPPNGTPTPRNGKNSDKAHPPIHPTKPGQDLQGNERRLYELITRRFLACVSQDAKYNETIIAVVVGGEHFSAKGCMYTERNYLDVYPYDRSKDNTLPPLKVGDTFTPSILELSDGHTTAPALLSEADLISLMDQNGIGTDATMHEHIKKILEREYAFKGQDNLFHPSSLGIALVEGYDAMGFDMSKPRMRAEMESDMRKICDGTRTKRAVVDDQIARYRDVFQAAVAQVEKLANALRQNFGLPQRDADDGPGGGAGGGGGGGGGGGGDDAFGGGGDGGGRNDGSQPLGPIRRCPRCKLCDMMVRKKKEGGYMIGCLGYPECGEVIWLPSSIEKARIADGGTCGVCADIGGVHPQPLMLRLKRGALPGHMDDEQKWCPGGCDTDLNDVLGIRLTRATRASVGAAPPARPIPKPKAPKAESFPEDDEDAAMEVIDIDGMDNARPPPGQRGGLSGRARALPGRAPSPVAGDPMAAKCNCGVAAVERTSRTGLHPGRLFYACAKQREDPDNCKFFKWADEIGSVGGPGFSQYSAGNGGSSEDNGDNPFCACNIATRRFTCQKEGENKGRQLFSCSKNRTDTTRCNFFLWADSADGPLPSFNAPSGPSTFVPASSAVKRYDSFGSNRNVGGGGHSNSPRLTNAGTLLCDCNNPTVKFTATKEGPNKGREFFTCKRPVGGCKFMKWADEMNPDGTSRTGIGGGGGGGGGGGSSASNSTCFKCQQVGHFANSCPNPHNLVVGRGRGGGGSGGGGGGGGKSSGSCFKCNQPGHFANACPNGDGNGYGGGGGGGSYGGGASKSFQGDSKKRKAPTCSACQEPGHTKKSCKRARLE* # ORIGINAL: g11393.t1 original gene structure, not modified by PASA NODE_407_length_24427_cov_42.9239 AUGUSTUS gene 1829 3319 . - . ID=g11393;Name=g11393.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS mRNA 1829 3319 . - . ID=g11393.t1;Parent=g11393;Name=g11393.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 1829 3319 . - . ID=g11393.t1.exon1;Parent=g11393.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 1829 3319 . - 0 ID=cds.g11393.t1;Parent=g11393.t1 #PROT g11393.t1 g11393 MPTIRDVSYRGVAAAFTVVAAAVAVDAICFILVPAKWLLFFASSYVWGFFVWDLAGIGLPAIAIWAGFVYAEVFLRDLPMSTFCRPLAAHSVGFPLLVMGFTLNSYAVYWYRQRTRRLVSQENSYYQDLVKQAVSPEVQGPDDIQDASGSEDGSASEAGGDVPVRSTRAISTSSASSSVPVSASLSVRSRGRSASNESTDVESISGMDGAAVSHNGIGNGHASVGTVPSSSLSSGKANGHGHAHALSTSNDDTMLRKLREEQASRQKAEAMFQRMEKEVQRLRGHEAALRGDVQQARSQLSVIEGERDEARRAINDAKQLRQKAEETRQAVEKRLNSEMAAKAAAEKRVRDLESSIVELEKKVSARAEAQRVATEQQIADLNRRLSEAESARTRAEKELSSVRNRGKRHDDDSRRLKDELVAAQAALDEAKQAADKLRAENLQYAKAMEGIQSVHEKNRGLQATLAAETRFKMDLMHELGKARREIESYKLQSMAH* # ORIGINAL: g11395.t1 original gene structure, not modified by PASA NODE_407_length_24427_cov_42.9239 AUGUSTUS gene 9403 10377 . + . ID=g11395;Name=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS mRNA 9403 10377 . + . ID=g11395.t1;Parent=g11395;Name=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 9403 9419 . + . ID=g11395.t1.exon1;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 9403 9419 . + 0 ID=cds.g11395.t1;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 9512 9625 . + . ID=g11395.t1.exon2;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 9512 9625 . + 1 ID=cds.g11395.t1;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 9742 9835 . + . ID=g11395.t1.exon3;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 9742 9835 . + 1 ID=cds.g11395.t1;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 9941 10030 . + . ID=g11395.t1.exon4;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 9941 10030 . + 0 ID=cds.g11395.t1;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS exon 10150 10377 . + . ID=g11395.t1.exon5;Parent=g11395.t1 NODE_407_length_24427_cov_42.9239 AUGUSTUS CDS 10150 10377 . + 0 ID=cds.g11395.t1;Parent=g11395.t1 #PROT g11395.t1 g11395 MFSGKTTELVRRMKRFQIANHNCMLIKYAKDNRYSEDGVSTHDRQVAAAKACQKLSELRKEAMKYGVIGIDEGQFFPDIVDFCEQMANEGKTVIVAALDGTFQRVPFGKVLELIPLAENVVKLSAVCMYCYEDAAFSKRLGAEMEVEVIGGSDKYISVCRSCFRAPGKKDAERIMRMNDH* # PASA_UPDATE: g11398.t1, single gene model update, valid-1, status:[pasa:asmbl_6932,status:12], valid-1 NODE_407_length_24427_cov_42.9239 . gene 23026 24191 . + . ID=g11398;Name=g11398.t1 NODE_407_length_24427_cov_42.9239 . mRNA 23026 24191 . + . ID=g11398.t1;Parent=g11398;Name=g11398.t1 NODE_407_length_24427_cov_42.9239 . five_prime_UTR 23026 23221 . + . ID=g11398.t1.utr5p1;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . exon 23026 23366 . + . ID=g11398.t1.exon1;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . CDS 23222 23366 . + 0 ID=cds.g11398.t1;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . exon 23712 23789 . + . ID=g11398.t1.exon2;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . CDS 23712 23789 . + 2 ID=cds.g11398.t1;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . exon 24058 24191 . + . ID=g11398.t1.exon3;Parent=g11398.t1 NODE_407_length_24427_cov_42.9239 . CDS 24058 24191 . + 2 ID=cds.g11398.t1;Parent=g11398.t1 #PROT g11398.t1 g11398 MSNENLAPNVVMRIVREIKSLVSEMPEGVHILTNDEDVTDVRAVIAGPAGTPYEGGEFHMKLVLCNDFPQAPPKGFFITKIFHPNVSSSGEICVNTLKKDWKPDLGMKHILLVRGGTI* # PASA_UPDATE: g11397.t1, single gene model update, valid-1, status:[pasa:asmbl_6931,status:12], valid-1 NODE_407_length_24427_cov_42.9239 . gene 15603 22396 . - . ID=g11397;Name=g11397.t1 NODE_407_length_24427_cov_42.9239 . mRNA 15603 22396 . - . ID=g11397.t1;Parent=g11397;Name=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 22364 22396 . - . ID=g11397.t1.exon1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 22364 22396 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 22120 22254 . - . ID=g11397.t1.exon2;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 22120 22254 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 21935 22029 . - . ID=g11397.t1.exon3;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 21935 22029 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 21473 21726 . - . ID=g11397.t1.exon4;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 21473 21726 . - 1 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 21272 21323 . - . ID=g11397.t1.exon5;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 21272 21323 . - 2 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 20878 21004 . - . ID=g11397.t1.exon6;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 20878 21004 . - 1 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 20447 20554 . - . ID=g11397.t1.exon7;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 20447 20554 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 20137 20215 . - . ID=g11397.t1.exon8;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 20137 20215 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 18583 19979 . - . ID=g11397.t1.exon9;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 18583 19979 . - 2 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 18240 18374 . - . ID=g11397.t1.exon10;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 18240 18374 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 17785 18063 . - . ID=g11397.t1.exon11;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 17785 18063 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 17144 17621 . - . ID=g11397.t1.exon12;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 17144 17621 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 16756 16928 . - . ID=g11397.t1.exon13;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 16756 16928 . - 2 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 16258 16538 . - . ID=g11397.t1.exon14;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 16258 16538 . - 0 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . exon 15603 16059 . - . ID=g11397.t1.exon15;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . CDS 15624 16059 . - 1 ID=cds.g11397.t1;Parent=g11397.t1 NODE_407_length_24427_cov_42.9239 . three_prime_UTR 15603 15623 . - . ID=g11397.t1.utr3p1;Parent=g11397.t1 #PROT g11397.t1 g11397 MSTKTEKLGKYVLGDCIGKGAFGAVFKALNTTDGTTVAIKKVKLGKMQELKQNTIMSEIELLKKLNHSNIVKYIGAHKKDGFLYIILEFVENGSLQSVLKKFGQFPETLVAVYITQVLDGLLYLHDQGVIHRDIKGANILTTKEGHVKLADFGVATKLADIDEAAVVGTPYWMAPEIIELSGSTTASDIWSVGCTVIELLTGVPPYFELAPMPALFRIVQDDHPPLPEGLSGALRDFLLQCFQKDPNLRVSAKKLLRHPWVVHSSRRQSKVQRPDDVMWDDALATIKQFNHTLQDPDLLVQLKRNASTKRGAIVRRGSVRDNILERNVRPSIESVFGINTVGQQQQQQQQQQQQQQQQQQRLSNVNEHASSSLSTPRNSTDESTRRPESLVSGSSRSSVNALPPRDGAAPDDDENWDDYFEGDLNLATVRKISNAAPPQQQHTQQSASASTQKQAIALASASSQSSAVSQKVKSQLSVESTTASVEGAEESEVWDDDFPDAEKLQTVRRVGGFLEGHTAQQTSIGDAASAATPAKDPAAQTPPSAPKVDDKRRPSGTKAGPPMSTADMLSKYAEEDESDDWLEVDEGELAKRLASAPTDESTSTSGRPAVASSPSQKDQLDASPAMRTSRTTSLSRSQRAESPSQSASSTLSGQEALAKFRDREDDGDFSDMFGAGGGTVRFQPAALRKLNEPTHVPGGDDSDDEDPFAGLEEDFEDYDQQARILQDKHARLSAEIMALIGKLSAKPADESGTLAVCNKLFDIFNEFPDQRYELIAHHGVIPIMELLEVSERPEILKSVLKIVNLIISDAPEIQENFCMVGGIPAIVRFAKASYDRSVRLEAAQFVRRMCQTNARTLQMFISCRGLPVLVELLGETYGGNEDVVKMAIDGIRSVFELESFTPKNDFCRLFSKSGLLRRLTGTMLQMLEELHATQAAIVQAAGGLVNVAPVNAGQASVVAAAAAAAADKNTPVMRKTSSTRNVLLGSRTSSSTSLMGPGNLQAVAGSSSPSEKREETPDERKAKVLGGYVLCIAEIFLWFSHADSVVKLELAKSDVLQPLVSFLDLFSVSSEVLVTLLKAVKNLSMDPNTLDSLQDAKTIPRLVKILDRRSGTLIKEMHNQVLNTLFNMCRLNRSRQEEAALAGAMAPLKFYINRDNSPLRQLALQIAFDIIGRRTNKTLTDNANNVEMFVSLLRDPYWQVNAIEALSAWALDDSKKAEAAICTPQNIKALVSAFAASKSPSFDRMGEPLHRMLLSSDLLARKLTAAGLMQVVLERLSNPKPNVRVDMLKLVGDMFHASELQRELMEAYKLGALCRRLMKGDPAVLVSEMAASLVAEFEHKSAKKKGFFASLIH* # ORIGINAL: g8681.t1 original gene structure, not modified by PASA NODE_296_length_27723_cov_40.9943 AUGUSTUS gene 1519 3215 . + . ID=g8681;Name=g8681.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS mRNA 1519 3215 . + . ID=g8681.t1;Parent=g8681;Name=g8681.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 1519 2105 . + . ID=g8681.t1.exon1;Parent=g8681.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 1519 2105 . + 0 ID=cds.g8681.t1;Parent=g8681.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 2186 3215 . + . ID=g8681.t1.exon2;Parent=g8681.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 2186 3215 . + 1 ID=cds.g8681.t1;Parent=g8681.t1 #PROT g8681.t1 g8681 MDTSFYVVEDQPAVATTAGPGGARGTSGAASLTAADAQSTNTGAVSPEEDDREAQKNFSFGGMTNLALGAGTTTTTIEIMVPNSIPGNHPGKVSRKYRDTVTKALSEHNLIPTPKQMVATIFNTQDHASYALVRIPVEVPVANIVDATAAATRLLTKAMKHAMKTRCKDESPPAEHKLRVFTLTAGAIKRLVTSECVEKVLSHVGLVSTTKCKLAKTKLARECGAVLVRIPLDTPAQREDVSLLAATTLLAKAHPSRAHRGNSVFRSALDGTLIVFTLSREAFDHLVASVWYKNKRFTLNTTLVCVHKATRRVVIAGLTAHDANWVESTVRRMAESIITFGGRADLAIRNISPALIEIIVPECAVGKLFGKRHSQLEVDLRGFGITPLHQSCATTDTLTPAQKAAGATLVSIYLHEVVEPTRARTAAMQLLTKALKHLAEFQTAQRKVNHMSGEREGASHDAHVHEPPLLRSVVPAVKPQPLICDDNSVCLQILSVPNQELWKRIQANLGRTLFPSVIRAGKMRLSSFAAHAEDASPS* # ORIGINAL: g8684.t1 original gene structure, not modified by PASA NODE_296_length_27723_cov_40.9943 AUGUSTUS gene 22865 25518 . - . ID=g8684;Name=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS mRNA 22865 25518 . - . ID=g8684.t1;Parent=g8684;Name=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 25476 25518 . - . ID=g8684.t1.exon1;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 25476 25518 . - 0 ID=cds.g8684.t1;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 25095 25228 . - . ID=g8684.t1.exon2;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 25095 25228 . - 2 ID=cds.g8684.t1;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 24630 24898 . - . ID=g8684.t1.exon3;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 24630 24898 . - 0 ID=cds.g8684.t1;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 23629 24322 . - . ID=g8684.t1.exon4;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 23629 24322 . - 1 ID=cds.g8684.t1;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 22865 23401 . - . ID=g8684.t1.exon5;Parent=g8684.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 22865 23401 . - 0 ID=cds.g8684.t1;Parent=g8684.t1 #PROT g8684.t1 g8684 MVRTARRGDSQKLLDDVGVSDSEDDLPASLGGDVEQDMDDDTDGAIGRLEKRSSRDGSQIGELEIDDGSSLEPSARDADLAHMTRLRIVGLNISWFGVCVIWFLLVIQVVPSQVQAIVGDSGKGSALGATVALGAVVTVVLSPLMGMLSDRSTLKWGRRRSFMVCGVVVMCVFMVGMALVNTTILVEETIGCAADDSSPASPTPSPMPSPTATTPNNASLLATISPTPTPTGSADSYSPHGSFGLYIFMNVVMTGAYVVFSVPYNGLMADKTPSHLRGFNSGVMGMLTTVGNLVGAGIGIFYVQIGVLGTYIIMIAITVVTLAITCATIPEKAHSHGGKPKPKLTVRSVFWGYIEPLRDHDFRWVFFTRFLMQQGVSTVQYFLKYWMQDAVQLPSCMTADRAVSIFFLPMLITASISALISGWLSDRWGRRRKPFVIGAGMLMCVTCAAMAGVRTYYPTIVLSLMFGVGYGAFLALDFALVMDVLPADRDNAKDMAVWHNALVLPQMLSTPIGGVIRDQFQKIGCGEECGLGYVVLFSITALYFFLGSVFVVRIRGVR* # ORIGINAL: g8683.t1 original gene structure, not modified by PASA NODE_296_length_27723_cov_40.9943 AUGUSTUS gene 15740 21918 . - . ID=g8683;Name=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS mRNA 15740 21918 . - . ID=g8683.t1;Parent=g8683;Name=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 20364 21918 . - . ID=g8683.t1.exon1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 20364 21918 . - 0 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 20056 20179 . - . ID=g8683.t1.exon2;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 20056 20179 . - 2 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 19771 19872 . - . ID=g8683.t1.exon3;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 19771 19872 . - 1 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 19388 19489 . - . ID=g8683.t1.exon4;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 19388 19489 . - 1 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 19124 19231 . - . ID=g8683.t1.exon5;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 19124 19231 . - 1 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 18770 18824 . - . ID=g8683.t1.exon6;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 18770 18824 . - 1 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 18415 18611 . - . ID=g8683.t1.exon7;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 18415 18611 . - 0 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 17980 18067 . - . ID=g8683.t1.exon8;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 17980 18067 . - 1 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 17723 17821 . - . ID=g8683.t1.exon9;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 17723 17821 . - 0 ID=cds.g8683.t1;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS exon 15740 17536 . - . ID=g8683.t1.exon10;Parent=g8683.t1 NODE_296_length_27723_cov_40.9943 AUGUSTUS CDS 15740 17536 . - 0 ID=cds.g8683.t1;Parent=g8683.t1 #PROT g8683.t1 g8683 MQKIKAIIKNVASLIGLDPAESEASREARDAPTAAARKPTPIMPPSNDNMKTRNNGMRPRSSDGDGVDDGGNPEKRIKLARPPLLISNAYGQSHTARPGGMLGSSSVGPQSEERSTWLTKRGDGVDEFAMTADDLKPGPVARVSLRQPGGRLSSGGRQLNAALQQGTTPTHTQKSHTSHYFQPSPRETDTQRQLQRRAALEESARKDCPVSLRRSLRSTSVIDLADDSGSPRTRSPEDEGTIRSCGDDVWSLGESLSGKIPKLARDESAVKDTRYSTFLMSGKDRGAESMSRGSSDMLNAAATPAQFDSASGRFSFGLTTTNRSTLSTVPSRAPAPRASAYSVGESEDSCELVDAAADHAASRVKELKGLLARERAMDVRNGPARCELREFACREVKFGREPIQRPPHGVLVVSPVGLKIPYTPTNKNSRGGNNMVELAFPHIQVVLAGAEPTSYVAIKTHDIIPESDNYNPDSENELHRYIVVTLMSMNDVTAFVEAFRACDGEVTRDYGLGARLLSGLKCVSKPAAPVDLQPERRASQRIREAAPQKERFVALVPSDFKFSYNNQVTLTASDIERLTDGEFLNDVIIDFYMRYLLNERMDPAKKERVHFFNSFFFEKLNRKEKGDGKPKGTMLSQIHQRVQKWTRNINIFEKEMIVIPVNESAHWFLVVIFYPGLLVGCKAGATESLDAEVDVETVHGDTAPTPPSPPSVQAEGSAPASNARADGESADIPPSILAANALAPPGALYLVEEYRAKFPTAAPLTVNKSTIRLHHVKVPAQDNFSDCGVFLLHYIETLITKPPPLLTDKKPDLSNWFDLSEVSGKRKGIFDLVRRLAAAQGQSAQPVPSPGVTSEDDATPAHVVMHSSSDDAPSDATAVARVEPGAVIAADVETATESNDSVGEEVGGGMESKTSGAENAGMDSSATPEPEPMDGTCDSAPLDSSTDLTATVGAMSLENNIRTGAAHCEKEGESNAADPSALAHRVAISTYYAPRLQGDNCGDVGDRENAAAGDCSDSAPKLSLDGIELAYESPLPYEPAVLDNVSGPTDATAALEHTSSTGAVAPPRVTPLIPGIVVIPHHTNYSLVDYCDSDVSNAPECFVEEGATLRRSARQKRKRLELENSDHYASPASMGAGRRQQRKSPQSTHVDDDAVCLLEPLGSRMGILRSDSCSEELFVSTAAADSLSPSAHPQPPSPAHVNHSPHAAVMKHWDEFSAVLDSAGIIAPSHFAQLQKDGKLSLNATGDESCANANEESRDESLRHDAPDGTPTAHASPEFEGDCSAVDRLHVSAAIGSGDGGSDASAVTATPTVPSAVGVDSASGVGLSSKITSGGAVDGGVSSGPPVVSAIGDVMRVERGTIRTYGSRRNPKRMSQMDSTAAEHALSRAAAADPPSPLTPPAVTIDLT* # PASA_UPDATE: g8682.t1, single gene model update, valid-1, status:[pasa:asmbl_5320,status:3], valid-1 NODE_296_length_27723_cov_40.9943 . gene 3896 14739 . + . ID=g8682;Name=g8682.t1 NODE_296_length_27723_cov_40.9943 . mRNA 3896 14739 . + . ID=g8682.t1;Parent=g8682;Name=g8682.t1 NODE_296_length_27723_cov_40.9943 . five_prime_UTR 3896 4088 . + . ID=g8682.t1.utr5p1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 3896 4223 . + . ID=g8682.t1.exon1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 4089 4223 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 4335 4416 . + . ID=g8682.t1.exon2;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 4335 4416 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 4644 4756 . + . ID=g8682.t1.exon3;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 4644 4756 . + 2 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 5015 5166 . + . ID=g8682.t1.exon4;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 5015 5166 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 5854 6187 . + . ID=g8682.t1.exon5;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 5854 6187 . + 1 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 6487 6662 . + . ID=g8682.t1.exon6;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 6487 6662 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 7016 7088 . + . ID=g8682.t1.exon7;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 7016 7088 . + 1 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 7552 7745 . + . ID=g8682.t1.exon8;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 7552 7745 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 7991 8141 . + . ID=g8682.t1.exon9;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 7991 8141 . + 1 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 8415 8528 . + . ID=g8682.t1.exon10;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 8415 8528 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 8681 8809 . + . ID=g8682.t1.exon11;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 8681 8809 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 8971 9483 . + . ID=g8682.t1.exon12;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 8971 9483 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 9765 9955 . + . ID=g8682.t1.exon13;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 9765 9955 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 10092 10266 . + . ID=g8682.t1.exon14;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 10092 10266 . + 1 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 10533 10679 . + . ID=g8682.t1.exon15;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 10533 10679 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 10839 11006 . + . ID=g8682.t1.exon16;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 10839 11006 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 11189 11305 . + . ID=g8682.t1.exon17;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 11189 11305 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 11531 11602 . + . ID=g8682.t1.exon18;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 11531 11602 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 11875 11997 . + . ID=g8682.t1.exon19;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 11875 11997 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 12222 12332 . + . ID=g8682.t1.exon20;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 12222 12332 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 12510 12636 . + . ID=g8682.t1.exon21;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 12510 12636 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 12940 13105 . + . ID=g8682.t1.exon22;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 12940 13105 . + 2 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 13373 13529 . + . ID=g8682.t1.exon23;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 13373 13529 . + 1 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 13842 13968 . + . ID=g8682.t1.exon24;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 13842 13968 . + 0 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 14130 14416 . + . ID=g8682.t1.exon25;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . CDS 14130 14392 . + 2 ID=cds.g8682.t1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . exon 14621 14739 . + . ID=g8682.t1.exon26;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . three_prime_UTR 14393 14416 . + . ID=g8682.t1.utr3p1;Parent=g8682.t1 NODE_296_length_27723_cov_40.9943 . three_prime_UTR 14621 14739 . + . ID=g8682.t1.utr3p2;Parent=g8682.t1 #PROT g8682.t1 g8682 MGDKDKGAVAIVLPDNSAVDYKTRFNRLQNLIFDIDSLVNLEGLLDTVKVLFDNCNTAEGRRLPNVPAHLEKYKQIIGQVESLRPNRNDFNTIKVIGRGAFGEVVVVQHKVTGEVFAMKKLSKVEMINKSDTAFYWEERDVMARAQSEWIVNLHSAFQDDRYLYLVMDYVPGGDLFTLTEQYDFSEDGIRFYMAELIAGIDALHSIGYIHRDIKPNNLLIDQHGHMKVADFGTCARMGPDGLVRTGTSIGTPDYLAPEVLESQCGNGEYGREVDWWCAGIVMYEMFYAETPFYDESLTRMYGKIQKHEKSLKFPNDADVKPSEEAMDLIRRLLTDRSKRIGKNGVEEIKAHPFFKGVDWANLRQMTPPVIPPVKSATDTSNFDGVDLPKEYAHTETFQPPKGFNGNHLPFIGYTFSRVHGWKAGGGEAAAGTGGDFKQKLEVEQKIRMDLENDKRQIADKYQRLLREREQDLSKVRELEGSRAEHERAAAMAAMELKELQRQLKQEVEAREAAEKAVTAHASQLTGNEKAIESMAELSRTFEAEKAGLNTEIARLKEDLRTEASACAAAEQRMGELERSEALNAVELKKTAEKLASALAAQKVTEGEMAELQSMLDHERRQLRKKTENLEDDLRALAEANRAATEAEALREEKARLTETVEQLDRAQHALELELKDAAVKAERTIAALEAKAAAAVAEVEVLRNATSSAAESSEVTAALEVKLKAALSEVDVLRGATAAAEKLLSASRLEAKDAERLAARESRAKEKVERDLVDMKTRLDDEAKQRQEFASKASDAEQALAKACEEIARFQSAVERESSAKASLQATCDEHEKELAVLRLQVKEGTRKLEITAKGRDTAEAKIAEMQTRVDALLKQADALREIEAARVQLISQLDDARNKLTSESARAKELDTQLSSAKRQKKLVELEVKSLNSRLDAEMGANRKSLEQIEQLLAHMSAETRQHNESLEVLRSEKDELQTLSDSLQEKVQLLTKDNHDTKAKLTATIAKLSEVAAGTGAAATLKKDNTNWRERKQQRLNAQDYKKMEMRLQEEIMGAQKLRIKVEQKDAEIADIRRKADALEAQLASVSSLGGHNRQLSAEMHDRSPPGHRRLSNESIFSVVPGSASGAKTIFDPHTGRLEGYLRMPKGRTLKAGWEKHFVVVTNMKMFVYADETNKSGDPSSVIDMGDVLHVRAVTKVEVYGVADSDVARIFQMLYPKKGEMRSDAASAQKSAELSTADEKEKVHESKGHLFVSVQLSKPSWCSYCSEFIFGLFKQAYICKKCKVIVHKKCHKEHAPCMDDVETAQLFFMAPSEADKKEWIDGIHNLITNTRRLKTSFNPSTSTASIAAAAAAAASVAAAAEDDDVEI* # PASA_UPDATE: g8680.t1, single gene model update, valid-1, status:[pasa:asmbl_5323,status:12], valid-1 NODE_296_length_27723_cov_40.9943 . gene 1 1220 . - . ID=g8680;Name=g8680.t1 NODE_296_length_27723_cov_40.9943 . mRNA 1 1220 . - . ID=g8680.t1;Parent=g8680;Name=g8680.t1 NODE_296_length_27723_cov_40.9943 . five_prime_UTR 1185 1220 . - . ID=g8680.t1.utr5p1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . exon 1182 1220 . - . ID=g8680.t1.exon1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . CDS 1182 1184 . - 0 ID=cds.g8680.t1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . exon 809 982 . - . ID=g8680.t1.exon2;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . CDS 809 982 . - 0 ID=cds.g8680.t1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . exon 471 570 . - . ID=g8680.t1.exon3;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . CDS 471 570 . - 0 ID=cds.g8680.t1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . exon 1 257 . - . ID=g8680.t1.exon4;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . CDS 172 257 . - 2 ID=cds.g8680.t1;Parent=g8680.t1 NODE_296_length_27723_cov_40.9943 . three_prime_UTR 1 171 . - . ID=g8680.t1.utr3p1;Parent=g8680.t1 #PROT g8680.t1 g8680 MGAATNRHGSLAFKKKEFYVYLSFIFSAFLSAIVIADYALMTGYDDPKTPTETWVRSLLVLHLASFYGFLISFIYSTESGNDRLWYISIVTGVLSFVAFIARVAYELAFEAYRPEVYVNE* # PASA_UPDATE: g8685.t1, single gene model update, valid-1, status:[pasa:asmbl_5321,status:12], valid-1 NODE_296_length_27723_cov_40.9943 . gene 26221 27285 . + . ID=g8685;Name=g8685.t1 NODE_296_length_27723_cov_40.9943 . mRNA 26221 27285 . + . ID=g8685.t1;Parent=g8685;Name=g8685.t1 NODE_296_length_27723_cov_40.9943 . five_prime_UTR 26221 26251 . + . ID=g8685.t1.utr5p1;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . five_prime_UTR 26470 26668 . + . ID=g8685.t1.utr5p2;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . exon 26221 26251 . + . ID=g8685.t1.exon1;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . exon 26470 26791 . + . ID=g8685.t1.exon2;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . CDS 26669 26791 . + 0 ID=cds.g8685.t1;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . exon 27127 27285 . + . ID=g8685.t1.exon3;Parent=g8685.t1 NODE_296_length_27723_cov_40.9943 . CDS 27127 27285 . + 0 ID=cds.g8685.t1;Parent=g8685.t1 #PROT g8685.t1 g8685 MFGWFQSLVEWFKSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFQEDMIPTVGFNMRKVTKGNVTIKLWDIGGQPRFRTMWERYCRGVNCIV* # ORIGINAL: g8291.t1 original gene structure, not modified by PASA NODE_2487_length_6096_cov_24.6404 AUGUSTUS gene 1720 2127 . - . ID=g8291;Name=g8291.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS mRNA 1720 2127 . - . ID=g8291.t1;Parent=g8291;Name=g8291.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 1720 2127 . - . ID=g8291.t1.exon1;Parent=g8291.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 1720 2127 . - 0 ID=cds.g8291.t1;Parent=g8291.t1 #PROT g8291.t1 g8291 MDDAIHRGDIDGILVAMHTSQLDAHVQTKCLHALGSNADNQVSIAREGGIAAIVLAINACTQWSCGRPGSTAGCVVLSSRLGANADNQVSIAQEGVITAVVAAMRAHGGHAGVQEQGCWALMILGLNADNKVSIA* # ORIGINAL: g8292.t1 original gene structure, not modified by PASA NODE_2487_length_6096_cov_24.6404 AUGUSTUS gene 3438 5825 . - . ID=g8292;Name=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS mRNA 3438 5825 . - . ID=g8292.t1;Parent=g8292;Name=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 5811 5825 . - . ID=g8292.t1.exon1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 5811 5825 . - 0 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 5264 5357 . - . ID=g8292.t1.exon2;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 5264 5357 . - 0 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 4861 4976 . - . ID=g8292.t1.exon3;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 4861 4976 . - 2 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 4562 4666 . - . ID=g8292.t1.exon4;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 4562 4666 . - 0 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 4251 4362 . - . ID=g8292.t1.exon5;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 4251 4362 . - 0 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 3902 4068 . - . ID=g8292.t1.exon6;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 3902 4068 . - 2 ID=cds.g8292.t1;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS exon 3438 3701 . - . ID=g8292.t1.exon7;Parent=g8292.t1 NODE_2487_length_6096_cov_24.6404 AUGUSTUS CDS 3438 3701 . - 0 ID=cds.g8292.t1;Parent=g8292.t1 #PROT g8292.t1 g8292 MLIHRVQKVRDHLDRIDKPSGMYANFMNPFHGSWSSSHASLGALGDSFYEYLIKGWLVSGKTDEQARRMYDAAIEAILRNMLRRPPAGQEGLTYVAEWQGGIVEHKMDHLACFAGGMFAIGARDQSEEIFQIGADVTSTCHESYKQRASGIGPEAMRFNPNTYTFTDGNNQYILRPETAESYFVLYRLTRDQKYRDWGWEMVQAIEKHCRAAAGYAGLSNVQSAHPSQDDVQQSLFMAQTLKYLYLLFSDERLISIDEWVFNTEAHPIPVKPLRGQIPKIRDMLMMVGDL* # ORIGINAL: g3999.t1 original gene structure, not modified by PASA NODE_1326_length_12097_cov_42.6977 AUGUSTUS gene 9542 11820 . + . ID=g3999;Name=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS mRNA 9542 11820 . + . ID=g3999.t1;Parent=g3999;Name=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 9542 9662 . + . ID=g3999.t1.exon1;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 9542 9662 . + 0 ID=cds.g3999.t1;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 9878 10056 . + . ID=g3999.t1.exon2;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 9878 10056 . + 2 ID=cds.g3999.t1;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 10290 10513 . + . ID=g3999.t1.exon3;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 10290 10513 . + 0 ID=cds.g3999.t1;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 10944 11123 . + . ID=g3999.t1.exon4;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 10944 11123 . + 1 ID=cds.g3999.t1;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 11364 11820 . + . ID=g3999.t1.exon5;Parent=g3999.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 11364 11820 . + 1 ID=cds.g3999.t1;Parent=g3999.t1 #PROT g3999.t1 g3999 MAAAVAAVQMASTMNDSDELTWVDLGPGVGASPLAHRRRSGSISSLFPSMRGEAEYLVEHGFVVDGFSAKWKNRSEWAPSTLVISNFRLCIIMNYRSMLFVPLKVIDRVEKRSADQCAIFCKDGRLFVVAFSMSERCDMFCDQLEKSATPFRLEGLFAFGFARAYPELRVPQDWRVYDAVAEYRRLGFLDSPCWRLSLVNADYTVASSYPAVVAVPSGVSDQQLQKAGQFRAKGRFPAAVWKKPGSNAVIARSSQPCLGVLGSRRCAEDELLLSEMAAISSIPCLDIWRGTASSDPYATRDDKGECAPAAKTAPSGMMVAGKDVSKTAHAAPKEKRESLSSAAAAAASDGRAKPRKLVYIVDARPFANALANQAKGGGYENLGEFI* # PASA_UPDATE: g3996.t1, single gene model update, valid-1, status:[pasa:asmbl_1215,status:12], valid-1 NODE_1326_length_12097_cov_42.6977 . gene 114 553 . + . ID=g3996;Name=g3996.t1 NODE_1326_length_12097_cov_42.6977 . mRNA 114 553 . + . ID=g3996.t1;Parent=g3996;Name=g3996.t1 NODE_1326_length_12097_cov_42.6977 . five_prime_UTR 114 115 . + . ID=g3996.t1.utr5p1;Parent=g3996.t1 NODE_1326_length_12097_cov_42.6977 . exon 114 553 . + . ID=g3996.t1.exon1;Parent=g3996.t1 NODE_1326_length_12097_cov_42.6977 . CDS 116 550 . + 0 ID=cds.g3996.t1;Parent=g3996.t1;5_prime_partial=true NODE_1326_length_12097_cov_42.6977 . three_prime_UTR 551 553 . + . ID=g3996.t1.utr3p1;Parent=g3996.t1 #PROT g3996.t1 g3996 VLKEILRQREHLYPNMHVISNYIAWDETTQKAVGFLGRTIHVFNKYEFSIAGSEFHRKVEKRRKVILLGDGLGDLQMSHGVAYDTILTIGFLNDKIEERMEAYVNAFDVVILNDGPMDYVNDIVRQLALKAKLKAANQSNEVAH* # ORIGINAL: g3998.t1 original gene structure, not modified by PASA NODE_1326_length_12097_cov_42.6977 AUGUSTUS gene 6444 8110 . + . ID=g3998;Name=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS mRNA 6444 8110 . + . ID=g3998.t1;Parent=g3998;Name=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 6444 6481 . + . ID=g3998.t1.exon1;Parent=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 6444 6481 . + 0 ID=cds.g3998.t1;Parent=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 6578 7397 . + . ID=g3998.t1.exon2;Parent=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 6578 7397 . + 1 ID=cds.g3998.t1;Parent=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 7727 8110 . + . ID=g3998.t1.exon3;Parent=g3998.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 7727 8110 . + 0 ID=cds.g3998.t1;Parent=g3998.t1 #PROT g3998.t1 g3998 MSGQKKKSGDAKRDSTSQDLDDLYSLSVFGDAFLSQLDDAPEVGDDITAATLVGKGKKGKKVVAGAQPSVDGDHRRRDAPSTLQPSKKRKRDLEAIGTHPPKKITFMRHGATEATSPAVSMDTVAAIPPPIVPVSKHPSKRSLEEDAVDEQPRKRQPIVVEYKRNVPRKGAENVSSELLKKQRRLFMSEKIEKVHSDALAALLETPSRRTDDDSSDDMKGIDLDKIAREVQVLGATGLGKKEAKELKIRRILALGGAAPEKPRAPFKISLGMNKKQKERDTKRVEQEKMTGLLVGKLSISPAAQSASAATASAKGARWVPQADGLKPGVGKFRKGMLVLSKDEVKTLSKPPPKIKGASRGKKRGGSAGGDGGEKKPKFDAKRASAGGQGRGKSPKGRSKAKGKSGKGKGKGKR* # ORIGINAL: g3997.t1 original gene structure, not modified by PASA NODE_1326_length_12097_cov_42.6977 AUGUSTUS gene 2340 5011 . - . ID=g3997;Name=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS mRNA 2340 5011 . - . ID=g3997.t1;Parent=g3997;Name=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 4942 5011 . - . ID=g3997.t1.exon1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 4942 5011 . - 0 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 4057 4155 . - . ID=g3997.t1.exon2;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 4057 4155 . - 2 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 3676 3808 . - . ID=g3997.t1.exon3;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 3676 3808 . - 2 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 3372 3468 . - . ID=g3997.t1.exon4;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 3372 3468 . - 1 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 3078 3207 . - . ID=g3997.t1.exon5;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 3078 3207 . - 0 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 2671 2794 . - . ID=g3997.t1.exon6;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 2671 2794 . - 2 ID=cds.g3997.t1;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS exon 2340 2430 . - . ID=g3997.t1.exon7;Parent=g3997.t1 NODE_1326_length_12097_cov_42.6977 AUGUSTUS CDS 2340 2430 . - 1 ID=cds.g3997.t1;Parent=g3997.t1 #PROT g3997.t1 g3997 MKYHAAVVIAGLIIAATSVVALAGAQGSLNTAQTTCMSDSLKLSVASLVSKVKGLANVFNKLNEFYSSFIDAANMATKLVDGSQHCIPTLNYGKTCASLSRPYIGNCNYDGAGTALKHIYGNLTAPVAAPSANSDFPTASSLDKEGYLYVPIACQQNATCRLHIVFHGCEQGHALIGMDFVENAGYNGWAEANNIVVLYPQIAPTSIYGSNPKGCFDWWGFTDSKYAYKSGVQMIAVKKMIDALIGN* # PASA_UPDATE: g8056.t1, single gene model update, valid-1, status:[pasa:asmbl_7764,status:12], valid-1 NODE_4996_length_1092_cov_37.9499 . gene 1 875 . - . ID=g8056;Name=g8056.t1 NODE_4996_length_1092_cov_37.9499 . mRNA 1 875 . - . ID=g8056.t1;Parent=g8056;Name=g8056.t1 NODE_4996_length_1092_cov_37.9499 . five_prime_UTR 772 875 . - . ID=g8056.t1.utr5p1;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . exon 669 875 . - . ID=g8056.t1.exon1;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . CDS 669 771 . - 0 ID=cds.g8056.t1;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . exon 285 400 . - . ID=g8056.t1.exon2;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . CDS 285 400 . - 2 ID=cds.g8056.t1;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . exon 1 70 . - . ID=g8056.t1.exon3;Parent=g8056.t1 NODE_4996_length_1092_cov_37.9499 . CDS 1 70 . - 0 ID=cds.g8056.t1;Parent=g8056.t1;3_prime_partial=true #PROT g8056.t1 g8056 MASYDEEIPDADKVKIASDFILNAPPGEFNEVFNDVRVLLNNDTLLKEGAAKAFAKYNKDQFTAVQLPGQKAKTLVTKHGEVGDNLFLDPKSGQTF # PASA_UPDATE: g9366.t1, single gene model update, valid-1, status:[pasa:asmbl_3615,status:12], valid-1 NODE_2143_length_7521_cov_40.8051 . gene 291 7389 . + . ID=g9366;Name=g9366.t1 NODE_2143_length_7521_cov_40.8051 . mRNA 291 7389 . + . ID=g9366.t1;Parent=g9366;Name=g9366.t1 NODE_2143_length_7521_cov_40.8051 . five_prime_UTR 291 291 . + . ID=g9366.t1.utr5p1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 291 461 . + . ID=g9366.t1.exon1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 292 461 . + 0 ID=cds.g9366.t1;Parent=g9366.t1;5_prime_partial=true NODE_2143_length_7521_cov_40.8051 . exon 872 1107 . + . ID=g9366.t1.exon2;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 872 1107 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 1342 1449 . + . ID=g9366.t1.exon3;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 1342 1449 . + 2 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 1867 2020 . + . ID=g9366.t1.exon4;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 1867 2020 . + 2 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 2301 2355 . + . ID=g9366.t1.exon5;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 2301 2355 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 2537 2582 . + . ID=g9366.t1.exon6;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 2537 2582 . + 0 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 2763 3114 . + . ID=g9366.t1.exon7;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 2763 3114 . + 2 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 3293 3328 . + . ID=g9366.t1.exon8;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 3293 3328 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 3534 3655 . + . ID=g9366.t1.exon9;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 3534 3655 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 3883 4612 . + . ID=g9366.t1.exon10;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 3883 4612 . + 2 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 4855 5038 . + . ID=g9366.t1.exon11;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 4855 5038 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 5346 5569 . + . ID=g9366.t1.exon12;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 5346 5569 . + 0 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 5828 6261 . + . ID=g9366.t1.exon13;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 5828 6261 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 6373 6712 . + . ID=g9366.t1.exon14;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 6373 6712 . + 2 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 6854 6889 . + . ID=g9366.t1.exon15;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 6854 6889 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . exon 7061 7389 . + . ID=g9366.t1.exon16;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . CDS 7061 7292 . + 1 ID=cds.g9366.t1;Parent=g9366.t1 NODE_2143_length_7521_cov_40.8051 . three_prime_UTR 7293 7389 . + . ID=g9366.t1.utr3p1;Parent=g9366.t1 #PROT g9366.t1 g9366 DVDVVQEGIGEKVGMFSQTISTFFAAFGLGFWRGYKMTLVMLSVVPVLAICGAALAKIISSLSAKGQDAYAEAGSVAEEAISSIRTVVAFSGEKRELKRYTANLELAEASGIKKGVLTGTGLGVTFFVLFSAYALSFWYGSRLVAHGEMTGGKVTTVFFSVMMGAFTLGQLGPCLTAFSDAMGAAYRVFHTIDRQSQIDSASTEGRKPASVSGAIQLKGVMFRYPARADVGVLNDMDLQIEMGKTTALVGPSGCGKSTVLGLIQRFYDADGGCVTIDGIDVKEWNVRYLREQIGVVRQEPILFNTSIERNIELGLPDGSPAPTHDDVVAACRLANAHDFISALPQGYATLVGERGVQLSGGQKQRIAIARALIRSPKILLLDEATSALDSESERVVQNALDVASMGRTTVVVAHRLSTIMNADVIAVISEGRVVERGTHTELMERDGLYAGLVKTQFAKAQSHDDDDGDVDAAAADATAAARSTSTAGPHAHKPSRQLSREVSIGGVDSATTRRSSSVTASEYEKRRRGSSSAGAVAIPVDESGATPHDECAPLQTAPSLPPTPAGTMAVAFRVYAMNKPEAPWIAAGIGACILNGSLMPAFSIIFSKIISIFAESGDDLKHDANFWSLMFVVLAVGAGIANFTQSTCLSIAGERLTTRIRRLCFENILRQEIGWFDLEENATGALATRLSSDASLVRGMSGARFGIIAQAMVSAFGGLGIAFYSGWKLTLVILATLPLIVIAGIMQVNKLKGFAQDGKEAYQSSGRVASEAVENVRTVATLGREAYFVAEYDTHISIPYKKGIKRALLSGVGFGVSQAFVLLVDAVAFYYGSVLVSRDELSFASMMRVFTSVIFCTMSASQAMSWAPDYSKAVAAAINVYALLDRKSSIDGTSDRGRVVDIARVAGKVELKDVTFTYPMRPDTVVLNGLSLSVRPGHVLALVGPSGCGKSTVVSLLERFYDPDTGSVHIDDNDTSTLRPSVLRNTMSLVGQEPILFAASIAENIRYGREAAGFDEVVAAAKLANLHDFVESLPDKYDTLVGEKGTQLSGGQKQRVAIARALVREPKLLLLDEATSALDAESEKIVQEALDRASAGRTTIVIAHRLSTVRNAHAIAVVRGGRIVELGRHDDLIAQKGFYRDLVSKQMQDITH* # ORIGINAL: g7723.t1 original gene structure, not modified by PASA NODE_756_length_18073_cov_39.9161 AUGUSTUS gene 2 667 . + . ID=g7723;Name=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS mRNA 2 667 . + . ID=g7723.t1;Parent=g7723;Name=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS exon 2 95 . + . ID=g7723.t1.exon1;Parent=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS CDS 2 95 . + 1 ID=cds.g7723.t1;Parent=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS exon 246 407 . + . ID=g7723.t1.exon2;Parent=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS CDS 246 407 . + 0 ID=cds.g7723.t1;Parent=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS exon 578 667 . + . ID=g7723.t1.exon3;Parent=g7723.t1 NODE_756_length_18073_cov_39.9161 AUGUSTUS CDS 578 667 . + 0 ID=cds.g7723.t1;Parent=g7723.t1 #PROT g7723.t1 g7723 EGPILAPISHTIVFEDPKLQVISFHLPAHTREPYHTHLYFSMLIKVHNTKDQYWTEDGTVAGHGAPFNASEPLGLSLMAPEWLHSVDNLDDEDYHAVRIEFFPVSQIAYMWPSV* # PASA_UPDATE: g7724.t1, single gene model update, valid-1, status:[pasa:asmbl_9217,status:12], valid-1 NODE_756_length_18073_cov_39.9161 . gene 1633 9373 . + . ID=g7724;Name=g7724.t1 NODE_756_length_18073_cov_39.9161 . mRNA 1633 9373 . + . ID=g7724.t1;Parent=g7724;Name=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 1633 1744 . + . ID=g7724.t1.exon1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 1633 1744 . + 0 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 1881 3843 . + . ID=g7724.t1.exon2;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 1881 3843 . + 2 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 3979 6241 . + . ID=g7724.t1.exon3;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 3979 6241 . + 1 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 6470 6825 . + . ID=g7724.t1.exon4;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 6470 6825 . + 0 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 6961 7180 . + . ID=g7724.t1.exon5;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 6961 7180 . + 1 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 7328 8312 . + . ID=g7724.t1.exon6;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 7328 8312 . + 0 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 8447 8580 . + . ID=g7724.t1.exon7;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 8447 8580 . + 2 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . exon 8719 9373 . + . ID=g7724.t1.exon8;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . CDS 8719 9231 . + 0 ID=cds.g7724.t1;Parent=g7724.t1 NODE_756_length_18073_cov_39.9161 . three_prime_UTR 9232 9373 . + . ID=g7724.t1.utr3p1;Parent=g7724.t1 #PROT g7724.t1 g7724 MESKRRPASFLLNDGSRFSGLCFGAERSVAGEAVFQTGMVGYTEAITDPSYEGQILVITYPLVGNYGVPGTEPDFSTLPLHFESNRIHVAGLIVADYTDNYSHWRAVESLSAWLKRENIPAIYGVDTREITKKIREKGVMLGKILVADESGQEADIDWHDPNADNLVAKVSTKVVKTYNPSPKFADDPNPVRILAVDVGMKYNQVRCFVNRGALLKVVPWDYDFSAEDYDGLFISNGPGDPVTCTPTIANIRKAIARSNRPIFGICLGHQLLSLAAGATTRKLKFGNRGHNIPCTDLRSGRCYITTQNHGYATDVTTLPAEWAPMFINANDGTNEGIMHTTKPFFSVQFHPESFPGPRDTEYLFDLFLDNVRASREAGRLVPLPPVKRVHAERQLVSKVLVLGSGGLSIGQAGEFDYSGSQCIKALKQEGITTVLINPNIATIQTSKGLADKVYFLPVTPEWVMKVIRHEKPDGILVTFGGQTALNCGIKIYEELDALGVKVLGTPIDTIVKTEDREIFAREMKSIGEPVAQSASAVNPEEALEIARRIGFPVIVRAAYALGGLGSGFAENAEQLNELTTKAFTTSPQVLVERSMKGWKEIEYEVVRDCHDNCITVCNMENFDPLGIHTGDSIVIAPSQTLSDREYHMLRSSAVKVIRHLGVVGECNIQFALNPDSEEYAIIEVNARLSRSSALASKATGYPLAFVAAKLSLNIPLTEIKNSVTRVTSACFEPSLDYCVVKIPRWDLKKFTRVGTKLSSSMKSVGEVMSIARTFEEALQKAIRAVDDSLPGFEAGVVGAFAQLDEELSNPSDRRLFAIADAFDKGYTVDRLHDLTKIDRWFLHKLAAISVLRRDISSYDSTKHPLPQGVPFVGSRALPEPVLLRAKRLGFSDAQIARLTGVSELAIRQARIEKGIIPSVKQIDTVAAEFPAQTNYLYMTYNASATDVLFEDKGIMVLGSGVYRIGSSVEFDWCAVSAVRTLRKHGLKTIMINYNPETVSTDYDEADRLYFENITLETVLDVYEREQSGGVIISMGGQVPNNIALPMMRQGVKILGTSPVQIDMAENRYKFSRLLDTLGVDQPKWKELTSLSEASEFCDRVSYPVLVRPSYVLSGAAMSVVYTADDLANYLGEAVAVSRECPVVISKYITEAKEIDVDAVAKDGRLVMHLISEHVENAGVHSGDATLVHPPQDLDPETITKLERATMKIAHALNVTGPFNIQFIAKDNDIKVIECNIRSSRSFPFVSKTSGVDMIEMATKAMLNIPFKAYPNAGHAPSTIVGVKVPQFSFSRLQGADPILGVEMASTGEVACFGATKYEAYVKALVATGFNLPRDRKSVVLSIGSYKEKQEFLPAVQKLHALGYKLYGTPGTADFYSEHDVPIIAIDFVGDNGEGNDVDSSGYSILTHLANKQIGLYVCLPSRNKYRRPASYMSRGYLTRRAAIDFQVPLVTNIKCAKLLIEAISRLPNWDDLPLTAADVKSSNKTVTLPGLVSIVVQAPIDIADGARVTAITKAAIAGGFTQVCLVPSLTPHSLTAAGLASVRESAAATAVCDFAIYAGSSDVLSSKSTQHFAGVFIDAAQSPSGISELAHLAHEFEHTPRHLPLVLRASDVRLASVLHLATVYERSIHVTQVSTKAELSLIRASKERRHRVTCDVSPLALFPATPTEDSQALWDGLKTIDAFATGIDHDLSGLTTALPLLLSAYHDGRLSIEDIVDKLHTQPARILRLPEQSETSVEIDLDRQWAHTLPAHAQVHISAHAQGKHGHGAVSRVVIRGKPAYIDGRAISESGVGHDIRALLPLAATAVVAEPLATAADARNVSSATAEDGLAVETDATPSGAIVHAHVERMLSIDDLSRDDSELAKSTLAAHSVLESAKIRHVLSVRSFGRRELHQLFQVATEMRTMVERMGSINVLGGKVMVSLFYEPSTRTNCSFQAAMLRLGGQVIDVDIKGSSVQKGETIHDTIRCVENYSDVIVMRHPEVGSVSEAASVSRVPVINAGDGIGEHPTQALLDLYTIREELGTVNGLVITLVGDLKHGRTTHSLVRLLAHYNVRLVYVSAPSLRMPEDIVRELSGLGIQQSEHATLDEVIADTDVLYVTRVQKERFASAEEYERMRGNFIVTPATLHNAKQKMIVMHPLPRVDEIDAEVDYDARAAYFRQMKYGLYVRMALLASILGRA* # PASA_UPDATE: g7726.t1, single gene model update, valid-1, status:[pasa:asmbl_9215,status:12], valid-1 NODE_756_length_18073_cov_39.9161 . gene 15362 17885 . - . ID=g7726;Name=g7726.t1 NODE_756_length_18073_cov_39.9161 . mRNA 15362 17885 . - . ID=g7726.t1;Parent=g7726;Name=g7726.t1 NODE_756_length_18073_cov_39.9161 . five_prime_UTR 17838 17885 . - . ID=g7726.t1.utr5p1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 17776 17885 . - . ID=g7726.t1.exon1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 17776 17837 . - 0 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 17500 17616 . - . ID=g7726.t1.exon2;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 17500 17616 . - 1 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 17144 17238 . - . ID=g7726.t1.exon3;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 17144 17238 . - 1 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 16769 16811 . - . ID=g7726.t1.exon4;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 16769 16811 . - 2 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 16479 16610 . - . ID=g7726.t1.exon5;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 16479 16610 . - 1 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 16094 16244 . - . ID=g7726.t1.exon6;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 16094 16244 . - 1 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 15875 15958 . - . ID=g7726.t1.exon7;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 15875 15958 . - 0 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . exon 15362 15592 . - . ID=g7726.t1.exon8;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . CDS 15449 15592 . - 0 ID=cds.g7726.t1;Parent=g7726.t1 NODE_756_length_18073_cov_39.9161 . three_prime_UTR 15362 15448 . - . ID=g7726.t1.utr3p1;Parent=g7726.t1 #PROT g7726.t1 g7726 MTAIVAVWTSNERPSFSYSFGFHRAEVLAVFSSTIILSFAALYILKESLERILQPPVLDGDYVAASAAFGAIAHLFGIYNVSKYAHALLGTSSSHATREWVIVLGRRLIRAGAVSAGQALLARGPVGDHVLAGLFASSAVALSAFVAGLPGWEIADPVIALGISIVIIAALLPVATFNARILLQAAPADVSNQIDKCLREATTLEGVLELRNERFWMESYGRIAGSLQVRIRRDANERAVLAGVTGKLSAHVTNLTVQLLKDDWTLSGPMGLGMQ* # PASA_UPDATE: g7725.t1, single gene model update, valid-1, status:[pasa:asmbl_9219,status:3], valid-1 NODE_756_length_18073_cov_39.9161 . gene 9658 14525 . + . ID=g7725;Name=g7725.t1 NODE_756_length_18073_cov_39.9161 . mRNA 9658 14525 . + . ID=g7725.t1;Parent=g7725;Name=g7725.t1 NODE_756_length_18073_cov_39.9161 . five_prime_UTR 9658 9830 . + . ID=g7725.t1.utr5p1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 9658 9951 . + . ID=g7725.t1.exon1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 9831 9951 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 10325 10446 . + . ID=g7725.t1.exon2;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 10325 10446 . + 2 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 10603 10683 . + . ID=g7725.t1.exon3;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 10603 10683 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 11317 11438 . + . ID=g7725.t1.exon4;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 11317 11438 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 11677 12016 . + . ID=g7725.t1.exon5;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 11677 12016 . + 1 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 12191 12456 . + . ID=g7725.t1.exon6;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 12191 12456 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 12610 12683 . + . ID=g7725.t1.exon7;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 12610 12683 . + 1 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 12995 13095 . + . ID=g7725.t1.exon8;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 12995 13095 . + 2 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 13306 13447 . + . ID=g7725.t1.exon9;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 13306 13447 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 13650 13720 . + . ID=g7725.t1.exon10;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 13650 13720 . + 2 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . exon 13889 14525 . + . ID=g7725.t1.exon11;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . CDS 13889 14410 . + 0 ID=cds.g7725.t1;Parent=g7725.t1 NODE_756_length_18073_cov_39.9161 . three_prime_UTR 14411 14525 . + . ID=g7725.t1.utr3p1;Parent=g7725.t1 #PROT g7725.t1 g7725 MGNYASALRGDGGNDAENGIEVAESGLVEPAQAYRYPPMEGSYFGSHFIMGGTRFPSFDPEAYLFGPLSDLNFLNCGKLPALANPPTSHLNVTTSIRSLLNLRKDTMRLVKQEEEGMYAIEFIFDAEGPCAASVYVFATERIDDNSNACYQSVDPSQCSRKYFFRKGLGQKFKDADFRINAAHLPTERHSYDGSSCYPLVVLLEVADQDGAQTAPRSGQSIATIAAFEASESSLSVKILKQKLVYGGASFLLQEIYGIEKAEPAGDGDNVSVVSGTGTERSLQGGVIAAADVASMDSILPRDAPAAMSSPALGSHAPSTAAVAVEDDEDDAQSECVVCMSEAKDTVVLPCRHLCLCNPCGEVLRYQSSKCPICRAPFHSLLQIRVAKPIPDTAEDASGAHSADPFADAQEVEVAPGLRCHSIPIVTAIEISRKESRPRRKPRKKRAPPPKSASADEEAASTVAPDGETTYHLDVEDEPSGSTQIPPGTPANVELKAIETLNGIPSDEDELPRSIASSLSSASQATVGASRVRSSRSPSTSTQGHITQEGHVTPRSASTTPRTSAAVVVGGAVDGAGAGTLGATPVVASGQPQEPLFARRASASGIAGATGGAIGAGGMSGSNLAPTNDEAAASHRAAASLLGLPIDNVRESEA* # ORIGINAL: g3161.t1 original gene structure, not modified by PASA NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS gene 503 1946 . + . ID=g3161;Name=g3161.t1 NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS mRNA 503 1946 . + . ID=g3161.t1;Parent=g3161;Name=g3161.t1 NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS exon 503 1756 . + . ID=g3161.t1.exon1;Parent=g3161.t1 NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS CDS 503 1756 . + 0 ID=cds.g3161.t1;Parent=g3161.t1 NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS exon 1932 1946 . + . ID=g3161.t1.exon2;Parent=g3161.t1 NODE_3983_length_2398_cov_41.0009_potentialcontaminant AUGUSTUS CDS 1932 1946 . + 0 ID=cds.g3161.t1;Parent=g3161.t1 #PROT g3161.t1 g3161 MASLEDIDRLIAELAEEEQTLCSHLARSSDAMTLAAGGFPPPPPGFADDDDDQFGVETECDDDIPPLPSSIALSAPPTAATTTTTTTTTTTTTPQQASRTQRTRVLTNQLPSPAAALEDQFYRREERSGSFAGKGAVFRGGAGASSVPESISAPSHASSSSQAASSFASSAPAASNASTPSAHSSSSAPARVSTIEALPHPPPEMIPPLSPALMSPRSRVTFQDLPPAPRTPSPQSTPPLPPKSGRALPSSSAGTSATPPATADAQAAVLDKPLPPKPPMHRGMSQRHMLPLAPPPAPQPSDDTYGVVGPAAQQQPISRPTPGSADAPRPLTMFPPKPTLQSARSTPNLFAPPLTVAIPPSSSSAHVGGPPPLPGMRRGSQENLLVQRFIDERIAVTVCAFDGSNSKTFEVGTKITPATLIQ* # PASA_UPDATE: g2359.t1, single gene model update, valid-1, status:[pasa:asmbl_8,status:3], valid-1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . gene 1003 10922 . + . ID=g2359;Name=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . mRNA 1003 10922 . + . ID=g2359.t1;Parent=g2359;Name=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . five_prime_UTR 1003 1178 . + . ID=g2359.t1.utr5p1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 1003 1591 . + . ID=g2359.t1.exon1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 1179 1591 . + 0 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 2095 2166 . + . ID=g2359.t1.exon2;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 2095 2166 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 2644 2715 . + . ID=g2359.t1.exon3;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 2644 2715 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 3074 3145 . + . ID=g2359.t1.exon4;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 3074 3145 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 3505 3648 . + . ID=g2359.t1.exon5;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 3505 3648 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 4226 4297 . + . ID=g2359.t1.exon6;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 4226 4297 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 4791 4862 . + . ID=g2359.t1.exon7;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 4791 4862 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 5271 5342 . + . ID=g2359.t1.exon8;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 5271 5342 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 5599 5670 . + . ID=g2359.t1.exon9;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 5599 5670 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 5870 5944 . + . ID=g2359.t1.exon10;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 5870 5944 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 6141 6215 . + . ID=g2359.t1.exon11;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 6141 6215 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 6669 6737 . + . ID=g2359.t1.exon12;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 6669 6737 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 6922 7465 . + . ID=g2359.t1.exon13;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 6922 7465 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 7593 8410 . + . ID=g2359.t1.exon14;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 7593 8410 . + 0 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 8543 8672 . + . ID=g2359.t1.exon15;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 8543 8672 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 8947 9059 . + . ID=g2359.t1.exon16;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 8947 9059 . + 0 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 9225 9413 . + . ID=g2359.t1.exon17;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 9225 9413 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 9645 9688 . + . ID=g2359.t1.exon18;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 9645 9688 . + 1 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 10027 10079 . + . ID=g2359.t1.exon19;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 10027 10079 . + 2 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 10332 10922 . + . ID=g2359.t1.exon20;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 10332 10709 . + 0 ID=cds.g2359.t1;Parent=g2359.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . three_prime_UTR 10710 10922 . + . ID=g2359.t1.utr3p1;Parent=g2359.t1 #PROT g2359.t1 g2359 MRAPPSLKQSRCGDIRWHAGSLRVQVTAAPLLIRPRLPQSASRCLDSQPEAYATSNKANINHGYIRMRQRRHGLDHGDAYCEQLLPLINALLLCAAVCARTTLAASCPPDCSCVNDPQRAGGLIMVSCHFGTNSLLSLDWSLGDITSLPPGVLDNLTLLTDFALSGNLLSSIPSNLFDKTVKLKIIMLSNNLLTSLPPGLFDKTVGLDTIHLESNSLASLPAGLFDNLKNVTTILLSDNRLTSLPATTFAQNTRLSKLELNINRLTSIPSTIFKPLTALTALKLSQNPGLDLPSGIFDTLTNLQSLSIGSLQLTSLRPGVFDALVNLNNLELQNNNLTTLPSGLFAKTSKLSTVTFTSNQIRSIPPDLFGSGTLPLSRISFYDNKLTTVPPGLFDKFSATLSGIAFDYNNISTFPMNIFSKLTPASLTLGNNPGNRGNRCANSSSHCIPPEKVSCESCFCSEGWTGSACTVRCGVGLWGADCRELCACQNGAACSRFVGACNCTVGWTGAICDQPCTGGTYGANCSLTCPCKNGAACDRFTGNCTCTTPLWTGSDCSVPLKPAAPAAAVVAKSANSISIRLCPSNDTVCPLMVYEIERIGCPPADTVRVDATSSMFIDSRGITPGLRYGYSIKAYNPVDVLQNTFSEASTLPIVTAGRSDRPDAAADVVAAATLDAAGSVAVRLSWVADTSSGPVLSTRISRNGVHLIVVFQSSYMDASVIPGEVYTYTVWNRNANGESAESHSNTVTAVGQSVSVVGGGSGTSAASIAGAVVGSVLGAALVVLGITYYVRRRAVKRAEIVALRELELIDKVERRPETADLEVPGDRIVLLSKIGEGEFGEVYRAEVDLPSSAGRTKTVAAVKMFKLAPTASVEEIRSARSAFLAEIDLMRQCTHHPHVVELLGINTRTPPNGMILEYAAHGDLRNFVQTESKRLTTSDLLCFCIDIARGMEHLASLRIIHRDLAARNCMCFAGPRPPNPQEKGWRLSAKASHVTVKVADFGLSRDGASDYYTGKTRRKLPVKWMAPECMEKRLWTHASDVWSYGVTAWEVFSRGTKPYPGIDNTAVLPYLQQGNRMTAPVGCPADVFAVIETCWKKHPETRPAFDKIVLYLRRAMIGGPRQGEQNDRAADAGGDGYAVERAGSGTAGKPLYVETIPDGTPVATSSLYVETEPDPNDMASLA* # ORIGINAL: g2360.t1 original gene structure, not modified by PASA NODE_1003_length_14859_cov_43.9541_potentialcontaminant AUGUSTUS gene 11379 12593 . + . ID=g2360;Name=g2360.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant AUGUSTUS mRNA 11379 12593 . + . ID=g2360.t1;Parent=g2360;Name=g2360.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant AUGUSTUS exon 11379 12593 . + . ID=g2360.t1.exon1;Parent=g2360.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant AUGUSTUS CDS 11379 12593 . + 0 ID=cds.g2360.t1;Parent=g2360.t1 #PROT g2360.t1 g2360 MATSFERLPIEVVAVHIAARLSNRDLRSLASVSSALRSRLVHLCRYTLRADIARRFYEDAGFRGAVEAAIPKGRIVFRFGARGYMLFTAGAALSGLHTLDLSECGTLTDVSALGSVHRLDLSGCHRLADVSALGRVHTLKLSRCSRVVDVSALGSVHVLRLRYGAVSNVSALTRVHTLDLGHCVNVSDVSALGFVHTLDLTACPNVTDVSVLGRVHRLDLIRCSGVVDVSALGNVHTLNLSGCTAVVDVSALGAVQCLVLSGCTGITDVSQLGSVPNLNLSGCTGIVDVSALGGVRSLTLARCARVRDVSALGRVPYLNLTECTGLVDVSALGGVYILDLSGCTGVVDVSALGGLYYLNLTNCTGVVDVGTLGGVYALGLTGCTGIVDAPRAGMSAAAWRRIRK* # PASA_UPDATE: g2358.t1, single gene model update, valid-1, status:[pasa:asmbl_7,status:12], valid-1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . gene 162 649 . - . ID=g2358;Name=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . mRNA 162 649 . - . ID=g2358.t1;Parent=g2358;Name=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . five_prime_UTR 603 649 . - . ID=g2358.t1.utr5p1;Parent=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 503 649 . - . ID=g2358.t1.exon1;Parent=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 503 602 . - 0 ID=cds.g2358.t1;Parent=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . exon 162 282 . - . ID=g2358.t1.exon2;Parent=g2358.t1 NODE_1003_length_14859_cov_43.9541_potentialcontaminant . CDS 162 282 . - 2 ID=cds.g2358.t1;Parent=g2358.t1;3_prime_partial=true #PROT g2358.t1 g2358 MEGTATAAHARLPYRRLSTLKGHTGTISAVRFNVQGSYCMTAGHDRIVRLWNPHKGTLVKAYVGHGWEVLDVA # PASA_UPDATE: g13921.t1, single gene model update, valid-1, status:[pasa:asmbl_6917,status:3], valid-1 NODE_4066_length_2248_cov_37.6249 . gene 1 1853 . - . ID=g13921;Name=g13921.t1 NODE_4066_length_2248_cov_37.6249 . mRNA 1 1853 . - . ID=g13921.t1;Parent=g13921;Name=g13921.t1 NODE_4066_length_2248_cov_37.6249 . five_prime_UTR 1749 1853 . - . ID=g13921.t1.utr5p1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . exon 1437 1853 . - . ID=g13921.t1.exon1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . CDS 1437 1748 . - 0 ID=cds.g13921.t1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . exon 724 1250 . - . ID=g13921.t1.exon2;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . CDS 724 1250 . - 0 ID=cds.g13921.t1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . exon 369 521 . - . ID=g13921.t1.exon3;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . CDS 369 521 . - 1 ID=cds.g13921.t1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . exon 1 196 . - . ID=g13921.t1.exon4;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . CDS 67 196 . - 1 ID=cds.g13921.t1;Parent=g13921.t1 NODE_4066_length_2248_cov_37.6249 . three_prime_UTR 1 66 . - . ID=g13921.t1.utr3p1;Parent=g13921.t1 #PROT g13921.t1 g13921 MPDPEVHQIVNSPISCHAWNKDRSQIALCPNTSEIHIYKRAGNAWERIHTLRGHDQRVMGLDWAATTNRIASCGQDRNAYVWTEQGGQWKPTLVILRINRAATQVKWSPKEDKFAVASGARLLSVCYFEEENDWWVSKHIKKPIRSTVLSIDWHPNNVLIACGSSDFKARIFSGYIKERDEKPKATCWGSRMPFGECLKEFSTGGGWVHSVAFSASGDRLAFVTHDAAVAVVNGLVENHISIVSTKNVPYKAVLWLTENSFVAAGHDNMPTLWTLNGANLSFVDKLDQGKKAAVASSNAMSKFRDLDKRATSDVQQSNETVLPTIHQNTITELSLFEGGKDKVSKFTTVGVDGRIVVWDVKSLEQSIAGLKVN* # PASA_UPDATE: g2731.t1, single gene model update, valid-1, status:[pasa:asmbl_7677,status:12], valid-1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . gene 215 1025 . + . ID=g2731;Name=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . mRNA 215 1025 . + . ID=g2731.t1;Parent=g2731;Name=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . five_prime_UTR 215 299 . + . ID=g2731.t1.utr5p1;Parent=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . exon 215 510 . + . ID=g2731.t1.exon1;Parent=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . CDS 300 510 . + 0 ID=cds.g2731.t1;Parent=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . exon 634 1025 . + . ID=g2731.t1.exon2;Parent=g2731.t1 NODE_4864_length_1184_cov_337.738_potentialcontaminant . CDS 634 1025 . + 2 ID=cds.g2731.t1;Parent=g2731.t1 #PROT g2731.t1 g2731 MADLGAEDRLRIATAQNLWDTLHKCACNLVTTHHFHCGRCPEGSHIAGKTRPLQHYTMTHLNRIYCATVKGVPGYIPVCKCSMVNEKSKAHFHCPLCGHLEVSATTSMAFDGMRRHFKAQHVNDTSENVISAPSPAPIYPNSDDCDEHSSAATAGEMEPTWPARDVVHLPFCPTTGCRSVSLTDAMVGSNYVRWHCLQDI* # PASA_UPDATE: g1172.t1, single gene model update, valid-1, status:[pasa:asmbl_785,status:12], valid-1 NODE_1202_length_13138_cov_42.9498 . gene 9864 12981 . + . ID=g1172;Name=g1172.t1 NODE_1202_length_13138_cov_42.9498 . mRNA 9864 12981 . + . ID=g1172.t1;Parent=g1172;Name=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 9864 9866 . + . ID=g1172.t1.exon1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 9864 9866 . + 0 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 10351 10551 . + . ID=g1172.t1.exon2;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 10351 10551 . + 0 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 10671 10848 . + . ID=g1172.t1.exon3;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 10671 10848 . + 0 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 11026 11227 . + . ID=g1172.t1.exon4;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 11026 11227 . + 2 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 11530 11646 . + . ID=g1172.t1.exon5;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 11530 11646 . + 1 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 11744 12095 . + . ID=g1172.t1.exon6;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 11744 12095 . + 1 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 12199 12315 . + . ID=g1172.t1.exon7;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 12199 12315 . + 0 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 12532 12645 . + . ID=g1172.t1.exon8;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 12532 12645 . + 0 ID=cds.g1172.t1;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . exon 12917 12981 . + . ID=g1172.t1.exon9;Parent=g1172.t1 NODE_1202_length_13138_cov_42.9498 . CDS 12917 12981 . + 0 ID=cds.g1172.t1;Parent=g1172.t1;3_prime_partial=true #PROT g1172.t1 g1172 MVNENVSELKAALKGKRFLDDHSMIPLSPSSTSIVGGRSSRASASRRSGHDIQDSADKPIRETVEGDEEFVEFDIVHFNDVYHLEPHDKEPVGGAARFCTAVRSLAPDLVLFSGDCFNPSLTSTVTKGKHMVPVLNMLGVNAAVYGNHDFDFGVDTLEDLARDCTFPWLMSNVIDSATGRNLAGGLTHEILECRGLKIGLIGLVEEDWLETIEDIPETTKHLGLVDFGRELADKVRAMGADIVIALTHSRMPNDELLAAGCPNIDLILGGHDHFYEEKWVNGTCILNSGSDFQQMTHVKIRCFPATRNKPVVTTKRIDVTKDYVEDVAMLGVVQEYAELVSAKLAKKIGETTILLDARNDCVRTRESNLGNFITDIMRATTNSDLAILNGGTIRSNDTYGPGSLQLRHLMDILPIEDPVVSIKLTGAQVKDALENGVSKWPTHEGRFPQ # ORIGINAL: g1171.t1 original gene structure, not modified by PASA NODE_1202_length_13138_cov_42.9498 AUGUSTUS gene 8040 9343 . + . ID=g1171;Name=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS mRNA 8040 9343 . + . ID=g1171.t1;Parent=g1171;Name=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 8040 8156 . + . ID=g1171.t1.exon1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 8040 8156 . + 0 ID=cds.g1171.t1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 8259 8400 . + . ID=g1171.t1.exon2;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 8259 8400 . + 0 ID=cds.g1171.t1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 8540 8589 . + . ID=g1171.t1.exon3;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 8540 8589 . + 2 ID=cds.g1171.t1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 8727 8786 . + . ID=g1171.t1.exon4;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 8727 8786 . + 0 ID=cds.g1171.t1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 8949 9067 . + . ID=g1171.t1.exon5;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 8949 9067 . + 0 ID=cds.g1171.t1;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS exon 9256 9343 . + . ID=g1171.t1.exon6;Parent=g1171.t1 NODE_1202_length_13138_cov_42.9498 AUGUSTUS CDS 9256 9343 . + 1 ID=cds.g1171.t1;Parent=g1171.t1 #PROT g1171.t1 g1171 MATIHSADASKSGESNGSSTTHEHHEGEPDVLGCHEPRQIMIAVDGSECGEAAFKWALRHIVHPQDSIVIIHVFPPQNLGDTSVIGLSGVAFPYDSFQKQINESLAAARHLVHAYGGRCKKLHLKCETILVHGPPGETLCNVATEIQPAVVVVGSRGLNAMKRLFMGSVSDHLAHNCPVPLVIIKLDGSKA* # PASA_UPDATE: g1168.t1, single gene model update, valid-1, status:[pasa:asmbl_783,status:12], valid-1 NODE_1202_length_13138_cov_42.9498 . gene 132 1937 . + . ID=g1168;Name=g1168.t1 NODE_1202_length_13138_cov_42.9498 . mRNA 132 1937 . + . ID=g1168.t1;Parent=g1168;Name=g1168.t1 NODE_1202_length_13138_cov_42.9498 . five_prime_UTR 132 178 . + . ID=g1168.t1.utr5p1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 132 259 . + . ID=g1168.t1.exon1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 179 259 . + 0 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 354 426 . + . ID=g1168.t1.exon2;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 354 426 . + 0 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 541 718 . + . ID=g1168.t1.exon3;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 541 718 . + 2 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 828 915 . + . ID=g1168.t1.exon4;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 828 915 . + 1 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 1064 1199 . + . ID=g1168.t1.exon5;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 1064 1199 . + 0 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 1349 1443 . + . ID=g1168.t1.exon6;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 1349 1443 . + 2 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 1564 1641 . + . ID=g1168.t1.exon7;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 1564 1641 . + 0 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . exon 1803 1937 . + . ID=g1168.t1.exon8;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . CDS 1803 1862 . + 0 ID=cds.g1168.t1;Parent=g1168.t1 NODE_1202_length_13138_cov_42.9498 . three_prime_UTR 1863 1937 . + . ID=g1168.t1.utr3p1;Parent=g1168.t1 #PROT g1168.t1 g1168 MRSTVVLVVAVVLATAFAGVDAHARWKCPAARDKNDASGTHLVFNNTGNKDGPCGPFSGKWGMGGQTNLKPGWNTFEWEESVSHAGSPFQLAILDENEVSRVVLLDHIPHWDSAKPVPYIEMTYQSYKISAFIPDIKCDKCSIRILYIMTDKTVKCGVPSCTYYPEDSACSGHTDSTAACFGAPNNNPCKAADTCFSNYHSCTDVTISGTTPIAQAQFDQPASWPFRNQPTGRNYGAEAATWKDGWLQGVPAEFTTPSANLC* # PASA_UPDATE: g1170.t1, single gene model update, valid-1, status:[pasa:asmbl_784,status:3], valid-1 NODE_1202_length_13138_cov_42.9498 . gene 5717 7291 . + . ID=g1170;Name=g1170.t1 NODE_1202_length_13138_cov_42.9498 . mRNA 5717 7291 . + . ID=g1170.t1;Parent=g1170;Name=g1170.t1 NODE_1202_length_13138_cov_42.9498 . five_prime_UTR 5717 5846 . + . ID=g1170.t1.utr5p1;Parent=g1170.t1 NODE_1202_length_13138_cov_42.9498 . exon 5717 6884 . + . ID=g1170.t1.exon1;Parent=g1170.t1 NODE_1202_length_13138_cov_42.9498 . CDS 5847 6884 . + 0 ID=cds.g1170.t1;Parent=g1170.t1 NODE_1202_length_13138_cov_42.9498 . exon 7070 7291 . + . ID=g1170.t1.exon2;Parent=g1170.t1 NODE_1202_length_13138_cov_42.9498 . CDS 7070 7102 . + 0 ID=cds.g1170.t1;Parent=g1170.t1 NODE_1202_length_13138_cov_42.9498 . three_prime_UTR 7103 7291 . + . ID=g1170.t1.utr3p1;Parent=g1170.t1 #PROT g1170.t1 g1170 MADKFGSAPPSYAQVIITEQPLAQPILDELVLQKLSAVRNYDIRQGNAILEALTDGAWPNTYIISDNDRHVVLTGSQQNETTPFPLYLVQEESDCCSRCCCPGLQSFVGRVHHASPEVRKGLAPCGCQRGHSYKSSPEAGVAFTLEREGCCSKCVGCFICCACCQNDMTLHGGNASVRPGMPPTTSPTYFGRSLVPIGGGGLVPTIHLFTTESQTPFAVVKGPTFYAGCLGICTDTVFHVHTAEGMGASKVEGDYIGTIVKPKPDSCGECCLQMCTSVDRYKFEAGPAFDGLNPQQRAVILGNIIHIEYMFFENDLPPVYCARSGNSTTIICTLCQMYCFGCCCPIQICIPLGGNN* # PASA_UPDATE: g1169.t1, single gene model update, valid-1, status:[pasa:asmbl_782,status:3], valid-1 NODE_1202_length_13138_cov_42.9498 . gene 2087 5081 . - . ID=g1169;Name=g1169.t1 NODE_1202_length_13138_cov_42.9498 . mRNA 2087 5081 . - . ID=g1169.t1;Parent=g1169;Name=g1169.t1 NODE_1202_length_13138_cov_42.9498 . five_prime_UTR 4864 5081 . - . ID=g1169.t1.utr5p1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . exon 4553 5081 . - . ID=g1169.t1.exon1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . CDS 4553 4863 . - 0 ID=cds.g1169.t1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . exon 2921 4219 . - . ID=g1169.t1.exon2;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . CDS 2921 4219 . - 1 ID=cds.g1169.t1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . exon 2507 2658 . - . ID=g1169.t1.exon3;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . CDS 2507 2658 . - 1 ID=cds.g1169.t1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . exon 2087 2284 . - . ID=g1169.t1.exon4;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . CDS 2142 2284 . - 2 ID=cds.g1169.t1;Parent=g1169.t1 NODE_1202_length_13138_cov_42.9498 . three_prime_UTR 2087 2141 . - . ID=g1169.t1.utr3p1;Parent=g1169.t1 #PROT g1169.t1 g1169 MSHADGDSAGSERDPLIVGINSPRHVCKSCGAHIDIENQVEKPRGICSRISIACADDCRVGCCTWKRFALTLVALILAAGVGVLVVWFGFISKAYSPHYTPTVRNPPTSPRANSTCLNSTSIRIDWTVPDARGSAITSYELTIDNSTTPSGNVHVLAYRGPRTTYTVGGLLGNRTYCFTVRAVNAVGPGDYSNATCATTQLPGLPLAPVSLRPIATNETSLAVAWDAADGRGAPISEYQVQRESDPSSGNFVDAGSTSALVLVVGGLKVGAAYALRVRAITYAGSSNWSAVTTLHTDMVDAAMPDAPTAPDVSNVTPGTVLFAWNSTGDGGAEIIDYVLNVTASAWGLTLSSPGSGSPPSVRNPAVSGNVGHVRRSLLGDDAAQYTGYPSHVLIAGFKSNTTYCARATAVNGKGESAPSNATCFRTDAAVVPSPMLPPDLSVGGTSSLSVHWDAPVDDGGSPITAYRLQADDWWSDTPLSDVYVGLLRDFVDDGRGVQLLPDSAYSFRVAASNAVGEGMFSDAVAFRTDANGACGNSADLGVFKSARDTMKSTIQGCLIKNILSEAKAVDCIAASLGISHVCAQCWGDEGECTLSKCALKCINPSSSECAACSQEECFPDCVLCSGVPSWAYPP* # ORIGINAL: g14005.t1 original gene structure, not modified by PASA NODE_2567_length_5855_cov_40.8813 AUGUSTUS gene 217 2311 . - . ID=g14005;Name=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS mRNA 217 2311 . - . ID=g14005.t1;Parent=g14005;Name=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 2237 2311 . - . ID=g14005.t1.exon1;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 2237 2311 . - 0 ID=cds.g14005.t1;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 1170 2043 . - . ID=g14005.t1.exon2;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 1170 2043 . - 0 ID=cds.g14005.t1;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 868 950 . - . ID=g14005.t1.exon3;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 868 950 . - 2 ID=cds.g14005.t1;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 521 577 . - . ID=g14005.t1.exon4;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 521 577 . - 0 ID=cds.g14005.t1;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 217 342 . - . ID=g14005.t1.exon5;Parent=g14005.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 217 342 . - 0 ID=cds.g14005.t1;Parent=g14005.t1 #PROT g14005.t1 g14005 MKSGARFERDDETGVAHFADRIAFKSTHKRTQAQLVDELVSLGGNASCSSSRDTIVYSASVFASDLDRLVEILADSVTNAQITTQEVDELRSAIYYERDQLDTKAPSIMPELIHQAAYNGKGLGHSLCCPRDRVDHVTAEDVRAFVSRNYTAPRMTIAAAGCDHAALVDLAHQHFGHLPKGTTESPMDPPAPPSPYVGGDVRMDGESDWTHLALAFESVPFVEDDFYPMSVLQVMMGGGDSFSAGGPGKGMYSRLYLEVLNQYAWMESSIAVHAAYSDTAVFGVQCSASPKNALSMVRTAVDQLRKIKKRPGPVELNRAKAMLRSLVLMNLESRSLLADDMGRQVLWVGKCLTASDICANIEKVTGDDIIRVASRVLKSRPTVAAFGDCLDLPPYEVIEAWLRE* # ORIGINAL: g14006.t1 original gene structure, not modified by PASA NODE_2567_length_5855_cov_40.8813 AUGUSTUS gene 3717 5637 . + . ID=g14006;Name=g14006.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS mRNA 3717 5637 . + . ID=g14006.t1;Parent=g14006;Name=g14006.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 3717 4424 . + . ID=g14006.t1.exon1;Parent=g14006.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 3717 4424 . + 0 ID=cds.g14006.t1;Parent=g14006.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS exon 4864 5637 . + . ID=g14006.t1.exon2;Parent=g14006.t1 NODE_2567_length_5855_cov_40.8813 AUGUSTUS CDS 4864 5637 . + 0 ID=cds.g14006.t1;Parent=g14006.t1 #PROT g14006.t1 g14006 MDSAPRSTAGDEDEEEFNPFSQDNSDGDMEDADAQVDGEGSATGTKGRGSSTSWRDRFLDAHVDYDGNAGVSTVTTGEQQAAFDEALTVQCVFEFDVSLGIYERDSKGHFSPVPHTSDGAERDVFKLRLGHGRRITLKFTEVGRSPIVIQRCVGVLACPGQGIRSEDTLLFDMVSAERSGSDSATFEVVGDWDAAQTTWPELLQETPKGAHHVITFAADIVLTGLDDPVRVTLEAKVRVYKQGERFWQFGRIMSNPFRYALAFEQLPAELMNNADAAASLAAAAALSDPSNSNGPLSPSIGNVSAIRRTSATAPPPFLMDSARFSRSDDSVDTFGDVDGHHSGVGAAATNSEHAHVPVSGSGAVRDVSAERWSDWTEVLASWDDVPRKKVTQLVRCGVPEQVRGRVWRLLAGTYDGEFREVYRYLSVRGSPCEDLIVADMTRTFSAHEYFRDGVGQETLLRLCRAYSVYDEEIGYVQGLSFILAVLLLHVSGG* # ORIGINAL: g13511.t1 original gene structure, not modified by PASA NODE_2752_length_5233_cov_41.9242 AUGUSTUS gene 1733 3025 . - . ID=g13511;Name=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS mRNA 1733 3025 . - . ID=g13511.t1;Parent=g13511;Name=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 2892 3025 . - . ID=g13511.t1.exon1;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 2892 3025 . - 0 ID=cds.g13511.t1;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 2562 2668 . - . ID=g13511.t1.exon2;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 2562 2668 . - 1 ID=cds.g13511.t1;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 2093 2222 . - . ID=g13511.t1.exon3;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 2093 2222 . - 2 ID=cds.g13511.t1;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 1733 1829 . - . ID=g13511.t1.exon4;Parent=g13511.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 1733 1829 . - 1 ID=cds.g13511.t1;Parent=g13511.t1 #PROT g13511.t1 g13511 MLRGVLQRAATGRVLSRVTVDVMRHGRRRFATAQPEKAPESSAETVPMKFIDKDNDTFLVKAIVGDHLLDVAHKNEIELEGACGGTLACSTCHVILEKRIYQMLPEPTEEENDMLDLAFGLCKTSRLGCQVKVQPEFAGMAVKLPGETFDARNER* # ORIGINAL: g13512.t1 original gene structure, not modified by PASA NODE_2752_length_5233_cov_41.9242 AUGUSTUS gene 3629 5056 . + . ID=g13512;Name=g13512.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS mRNA 3629 5056 . + . ID=g13512.t1;Parent=g13512;Name=g13512.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 3629 3933 . + . ID=g13512.t1.exon1;Parent=g13512.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 3629 3933 . + 0 ID=cds.g13512.t1;Parent=g13512.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS exon 4222 5056 . + . ID=g13512.t1.exon2;Parent=g13512.t1 NODE_2752_length_5233_cov_41.9242 AUGUSTUS CDS 4222 5056 . + 1 ID=cds.g13512.t1;Parent=g13512.t1 #PROT g13512.t1 g13512 MRVQMSGNRRRCFRKASASSFSVILLLCSIAVTCSWREVVGEAVDVDTGCPDWLFGKWMQESIEPKPNVDPTSVLLGKANFYCGETLWTEFDENALTLKTLEGTFDCRPSKSDPQVFEIDLTYAIPVTLFKSNTAYQLAAIRRDVVSLSSPLTGRPVTTETMSIVRSPRSYNSTALSRPSFTPSNAVSTWRRPSYDAIGGSGSNIQFKLCSGSQVIEIERRSYYGLELRVVNPGVIRTLGFNATDPGFSGASSKATMDCRVGTAEESAFVFEIWLPIADGSVTFEGFIITHCLGGIATGSGTRSKKSAIHVNMSMSHMEFVDNSPSLVPVNGGSVRLNGGGFVRISECLFTRSVGDDGCITSYSSAMEVIVEKSRFIGE* # PASA_UPDATE: g13510.t1, single gene model update, valid-1, status:[pasa:asmbl_4934,status:12], valid-1 NODE_2752_length_5233_cov_41.9242 . gene 104 1435 . + . ID=g13510;Name=g13510.t1 NODE_2752_length_5233_cov_41.9242 . mRNA 104 1435 . + . ID=g13510.t1;Parent=g13510;Name=g13510.t1 NODE_2752_length_5233_cov_41.9242 . exon 104 247 . + . ID=g13510.t1.exon1;Parent=g13510.t1 NODE_2752_length_5233_cov_41.9242 . CDS 104 247 . + 0 ID=cds.g13510.t1;Parent=g13510.t1;5_prime_partial=true NODE_2752_length_5233_cov_41.9242 . exon 588 738 . + . ID=g13510.t1.exon2;Parent=g13510.t1 NODE_2752_length_5233_cov_41.9242 . CDS 588 738 . + 0 ID=cds.g13510.t1;Parent=g13510.t1 NODE_2752_length_5233_cov_41.9242 . exon 1096 1435 . + . ID=g13510.t1.exon3;Parent=g13510.t1 NODE_2752_length_5233_cov_41.9242 . CDS 1096 1274 . + 2 ID=cds.g13510.t1;Parent=g13510.t1 NODE_2752_length_5233_cov_41.9242 . three_prime_UTR 1275 1435 . + . ID=g13510.t1.utr3p1;Parent=g13510.t1 #PROT g13510.t1 g13510 IVIYRPPDYAGMLFVAAATAGCIVLAYLFVPALWETMQSARLWGFLATAWVILFLSGQMWNQIRGPPFASQGKNGEPIYIHWSSQSQFVAETWLVYVLYALTSGCLVMLIAYVPKQELAATKRISAFVFGGLFFLVLSILFLVFRTKNRGYPFRLLL* # PASA_UPDATE: g4513.t1, single gene model update, valid-1, status:[pasa:asmbl_5280,status:12], valid-1 NODE_2944_length_4668_cov_40.6675 . gene 172 4461 . + . ID=g4513;Name=g4513.t1 NODE_2944_length_4668_cov_40.6675 . mRNA 172 4461 . + . ID=g4513.t1;Parent=g4513;Name=g4513.t1 NODE_2944_length_4668_cov_40.6675 . exon 172 4098 . + . ID=g4513.t1.exon1;Parent=g4513.t1 NODE_2944_length_4668_cov_40.6675 . CDS 172 4098 . + 0 ID=cds.g4513.t1;Parent=g4513.t1;5_prime_partial=true NODE_2944_length_4668_cov_40.6675 . exon 4294 4461 . + . ID=g4513.t1.exon2;Parent=g4513.t1 NODE_2944_length_4668_cov_40.6675 . CDS 4294 4461 . + 0 ID=cds.g4513.t1;Parent=g4513.t1 #PROT g4513.t1 g4513 DTNPESQGRDIAELVAQLRADSEKNELALQALREQIERSREDEQRTLADENAMEAEHMAKNKSIGAKKPTDSVQMSRSTTVARIEIPSKQPASMQQPTLTNGGGGQGQGQGLQLSPSTTHQQLHGAHQNPLVADIARLRSEYLRQGGADPHVLAQMAALEMQARAAGSAPVPPILNSGGLQPGTVGYPGAHHSFVDASSFYGLPQPPQPLPYAAYPTAPGRLPVIPGAFYSGGQQSGAGVAEDARTTLAVQAQLESYEEENRRLQSEIDALLARTKKQQQHDQQQRAIDAVASSMRRGPQQNGKPGSMSAQEALLRMGPPVIDPENLPENDAEVGQMRTEHAKKMLSLRHEYELLVQQSAVEALRSEQKKRGESERLMQDSWTLRNHVPTSGFGPYDPQMGFVVYWDFASGLPAAASQCALAFGLFDNGKVVGGVKALPKTECMLVDVPGVTAMSVQGRAGQQQQQQQQHQMSACVFGGRRAFANVPASPSACIIVEAQVPSVGTGKLEALGWSKFELFDSQQQLRAGRWRLRLRAPPMQVQLHASRVDSLTPVGEAELCIRVVVAQGRAIHDTVSLDPLSREYAHLDACAAAGNSHVAPPPPQPQPQPITRAPTLPPQSAHPVVAKPTVAQVAHVPSSFKAKSSAPPSVRKAATVIASESEEESGGDESEDDAPPQSLGRSKVAGSLAASSIRRARTMDVSAGSLGVQVDCLRDAGDGPYRLRVTLLDANGEATVDADGQPHMLVTEPQRSRFRAGIIDYNKQAMFSGGPSMPAYAVFEIIARVEGVDEAVAWTSTAVDPNETLPQAMTLPVYLPPLAALPDPNFHQRLASAALVAWTYPPGAPPKGPAPASSAGDSKMGDSNPNLLGEGDNNGVFGLPPDVFLPYNREYPPANAYEGDEGFDLYIDGARFLPDNVTISKVSGRIFDDHFNKIGPDLGTGIELDCDIFNPSYNARFEYRAIPVAPTATALLKLYTIDLVTRELMLVGYSALNVFVNIGTEDQPGPRDTVPIALNAGAFQLRVHSGAPDQTQLLTCRSLDFNRIVPCSTLLVRIVPAAKDDNGHAIAATAIPRDDWESKGLFVPPPSYVDGKYVSTSCYPSKGEASLYMTLASRAPLTVRNGLSLAGDGKEKRLRTDKTIQSWIKTRLSRPSALQVKDMPSTYIGKYIPKQGIAISIDCALNLPKAKLSFALLNMSPPGSFYHVGNRNQPKDSLNCTKALDLDSQLRAPVWKDGFRPFRRRLFSKFMVAIIDVRAVEIEEPGGFFGKSTDKRVYKLIDQGWTVVQVFTPNGYVLTESYQLPLYQGTPPESIIRQLREETVQAVMAKAVETKRVKLIPGGSVLVRIADYRRMAEIERPRVGYDYD* # ORIGINAL: g9356.t1 original gene structure, not modified by PASA NODE_1389_length_11629_cov_41.6037 AUGUSTUS gene 5447 8820 . + . ID=g9356;Name=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS mRNA 5447 8820 . + . ID=g9356.t1;Parent=g9356;Name=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 5447 5599 . + . ID=g9356.t1.exon1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 5447 5599 . + 0 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 5728 5885 . + . ID=g9356.t1.exon2;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 5728 5885 . + 0 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 6267 6286 . + . ID=g9356.t1.exon3;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 6267 6286 . + 1 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 6482 6663 . + . ID=g9356.t1.exon4;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 6482 6663 . + 2 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 6970 7071 . + . ID=g9356.t1.exon5;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 6970 7071 . + 0 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 7364 7497 . + . ID=g9356.t1.exon6;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 7364 7497 . + 0 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 7645 7716 . + . ID=g9356.t1.exon7;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 7645 7716 . + 1 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 7957 8039 . + . ID=g9356.t1.exon8;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 7957 8039 . + 1 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 8271 8400 . + . ID=g9356.t1.exon9;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 8271 8400 . + 2 ID=cds.g9356.t1;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 8709 8820 . + . ID=g9356.t1.exon10;Parent=g9356.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 8709 8820 . + 1 ID=cds.g9356.t1;Parent=g9356.t1 #PROT g9356.t1 g9356 MAFRSIGTTLTRRSLSKVTSDYAAPVVGYVRRPVHTVGLLPGDGIGKEVVPAARRVMEALNAPVQWIELEAGFEHFQKTGHALPDATLEVLKNQCRGALFGAVSSPSHAVEGYSSPIVAMRRKLDLYANVRPVVSSPVTGSKPGVDAVIVRENTECLYVQREKIVSTPEGKVATAERIISEKASRRISQMAFKVAMERTRRPDAKASKVTIVHKSNVLKVTDGLFRETALSVAKEYPNIKVEEQLVDSCVYRMFIHPESFDVIVAPNMYGDIVSDGAAAVVGGLGLVPSANVGDSFIMVEPVHGSAPDIQGKGIANPIATVRAAALMLENFGESRIAWAMEEGVRDAMIRGVLTPDLGGKSSTNDVVDAIIRGARSKLQTI* # PASA_UPDATE: g9355.t1, single gene model update, valid-1, status:[pasa:asmbl_1436,status:12], valid-1 NODE_1389_length_11629_cov_41.6037 . gene 2045 4163 . - . ID=g9355;Name=g9355.t1 NODE_1389_length_11629_cov_41.6037 . mRNA 2045 4163 . - . ID=g9355.t1;Parent=g9355;Name=g9355.t1 NODE_1389_length_11629_cov_41.6037 . exon 4105 4163 . - . ID=g9355.t1.exon1;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . CDS 4105 4163 . - 0 ID=cds.g9355.t1;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . exon 3802 3997 . - . ID=g9355.t1.exon2;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . CDS 3802 3997 . - 1 ID=cds.g9355.t1;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . exon 2898 3647 . - . ID=g9355.t1.exon3;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . CDS 2898 3647 . - 0 ID=cds.g9355.t1;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . exon 2045 2763 . - . ID=g9355.t1.exon4;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . CDS 2491 2763 . - 0 ID=cds.g9355.t1;Parent=g9355.t1 NODE_1389_length_11629_cov_41.6037 . three_prime_UTR 2045 2490 . - . ID=g9355.t1.utr3p1;Parent=g9355.t1 #PROT g9355.t1 g9355 MASALRTALSAARGVFSLGRSYGTITHATHRSNIERLRIVDSTLREGEQFSTAFFSTQDKLHIARTLDNIGVDCIEVTTPMASQQSARDCERIAGLGLRAKIMTHTRCHMVDVRAAVDSGVDAVNVYMATSGMLRQYSHGKGIEMIIDSAREVIDYVRSRGKEIRFSCEDTFRSDKTDLLRIYRAVDEMGVNRVGLADTVGIATPLEVLETVSAVRAAVGCDIEFHTHDDTGCCIANSLVALQAGANHIDTCVLGIGERNGITPLGGFLGRIYTINRAFIKGKYDLSLIRELEQYVARAVGIEIPFNNYITGSAAFTHKAGVHSKAVMQNPQSYEVLDPLDFGVERTIQIAHRLTGWNAVQHRAAQLGLALPEDAVKEITLSVKNLSDTRHVTPADVDSMLRSAARTYSAGPRVELGSLAHVAVA* # ORIGINAL: g9357.t1 original gene structure, not modified by PASA NODE_1389_length_11629_cov_41.6037 AUGUSTUS gene 9340 11337 . - . ID=g9357;Name=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS mRNA 9340 11337 . - . ID=g9357.t1;Parent=g9357;Name=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 11179 11337 . - . ID=g9357.t1.exon1;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 11179 11337 . - 0 ID=cds.g9357.t1;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 10580 10788 . - . ID=g9357.t1.exon2;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 10580 10788 . - 0 ID=cds.g9357.t1;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 10067 10217 . - . ID=g9357.t1.exon3;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 10067 10217 . - 1 ID=cds.g9357.t1;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS exon 9340 9510 . - . ID=g9357.t1.exon4;Parent=g9357.t1 NODE_1389_length_11629_cov_41.6037 AUGUSTUS CDS 9340 9510 . - 0 ID=cds.g9357.t1;Parent=g9357.t1 #PROT g9357.t1 g9357 MDTHGFPISFPMLLVKPYLLLYERWENLMRDFYDAAADTFNTSKVPDIYDYIKYDALHNRDCLDTRALYEKAKELADFVVPHEYGLDEKQRIEIGSLIAQPLLRHIVGEMSEAATSGCEGLTRLFFTSESHLHALINVLLHSGVLEHPDIEPASHDLNYLSHIVFQLYERIGGDGRPLGQMYVQIQFSPGASGNPFGILEDRHTLPVVPCVPLHRDDVMLSHFESHFAA* # PASA_UPDATE: g9354.t1, single gene model update, valid-1, status:[pasa:asmbl_1435,status:12], valid-1 NODE_1389_length_11629_cov_41.6037 . gene 487 1668 . - . ID=g9354;Name=g9354.t1 NODE_1389_length_11629_cov_41.6037 . mRNA 487 1668 . - . ID=g9354.t1;Parent=g9354;Name=g9354.t1 NODE_1389_length_11629_cov_41.6037 . five_prime_UTR 1642 1668 . - . ID=g9354.t1.utr5p1;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . exon 1480 1668 . - . ID=g9354.t1.exon1;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . CDS 1480 1641 . - 0 ID=cds.g9354.t1;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . exon 849 1006 . - . ID=g9354.t1.exon2;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . CDS 849 1006 . - 0 ID=cds.g9354.t1;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . exon 487 601 . - . ID=g9354.t1.exon3;Parent=g9354.t1 NODE_1389_length_11629_cov_41.6037 . CDS 487 601 . - 1 ID=cds.g9354.t1;Parent=g9354.t1 #PROT g9354.t1 g9354 MDGDSRNGDEGQHNMADGGLNVEPESLKEAPVEEDRQSIVSDAESNADSLGDVLDQGAIDSVFDMVTSEGAPANGESADANAKVVAPQRRKSVPVAPPPDEIIMSSWAEKEGGGAVFRGLVWSRRWFVLERVEGKLMLTYYREK* # PASA_UPDATE: g10165.t1, single gene model update, valid-1, status:[pasa:asmbl_3792,status:12], valid-1 NODE_2216_length_7210_cov_41.6911 . gene 5318 6636 . + . ID=g10165;Name=g10165.t1 NODE_2216_length_7210_cov_41.6911 . mRNA 5318 6636 . + . ID=g10165.t1;Parent=g10165;Name=g10165.t1 NODE_2216_length_7210_cov_41.6911 . exon 5318 6636 . + . ID=g10165.t1.exon1;Parent=g10165.t1 NODE_2216_length_7210_cov_41.6911 . CDS 5318 6475 . + 0 ID=cds.g10165.t1;Parent=g10165.t1 NODE_2216_length_7210_cov_41.6911 . three_prime_UTR 6476 6636 . + . ID=g10165.t1.utr3p1;Parent=g10165.t1 #PROT g10165.t1 g10165 MKIKIGRRAPAAFFGIFLFTFLIILAVFNSYPILPIPRRCGLNSTLAAYNERLHNLQRCAPGQASPPYILVTFRDDPPLVLPRNVYKFNRDGCLVTHDAIETVGGSIGELGSMRGIAIEPGGVEGRLLLVSRAVNASRVLMYGGCNSTDAPEKPRRFLGDFTKFGPNNTGLNLPYGIAFGVDGNVFVSEEDYDIVLRYYGLSSPDNMRGTPMPSLAKNAEHPGTFFVMSDKRARYGARALASARQLLWVANEPEYTVWGVDVNGKAMDALTGKNVLKKATPNAFAPVGLAYDTSGSLLYVTNGNTTQANAISYRLSGSNSHRFFQQYDARQVFFPTGVVVVDGLLYVVSQNDYMIHIFSVYSTSYKGNITLPLPACPEQMTLSMC* # ORIGINAL: g10164.t1 original gene structure, not modified by PASA NODE_2216_length_7210_cov_41.6911 AUGUSTUS gene 860 4375 . + . ID=g10164;Name=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS mRNA 860 4375 . + . ID=g10164.t1;Parent=g10164;Name=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 860 913 . + . ID=g10164.t1.exon1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 860 913 . + 0 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 1172 2044 . + . ID=g10164.t1.exon2;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 1172 2044 . + 0 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 2240 2398 . + . ID=g10164.t1.exon3;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 2240 2398 . + 0 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 2614 2699 . + . ID=g10164.t1.exon4;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 2614 2699 . + 0 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 2918 2990 . + . ID=g10164.t1.exon5;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 2918 2990 . + 1 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 3256 3515 . + . ID=g10164.t1.exon6;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 3256 3515 . + 0 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 3737 3808 . + . ID=g10164.t1.exon7;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 3737 3808 . + 1 ID=cds.g10164.t1;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS exon 4267 4375 . + . ID=g10164.t1.exon8;Parent=g10164.t1 NODE_2216_length_7210_cov_41.6911 AUGUSTUS CDS 4267 4375 . + 1 ID=cds.g10164.t1;Parent=g10164.t1 #PROT g10164.t1 g10164 MAVVVDREKFKAALRTPSADATKAWSKLESSTLPSSAIKTKQLVRLGIPSDRRGPIWLRLTGGAEIIQSHPKCYEDALASVFENGKGADNPRPPMFGSRTDLSRLFLTDEGVRHAARILCAVAYENPVVEFCPMLPILTVLFLHHMTPAEAFASVSSIVKSDGKSFYKRKPGASGEHRDANTIRSKHSSGGFLISSPKELTVAAEVVRGLVALRLPVVSEHILSLSPDTSKRSRFYDDWLDWTFECLSFDALERVVDCMLFEGKKILYRVGVGVIKASEPAIVRASSTGAAIAAVCSAAESISGDRLLEAGFSVSLSRKSLSSLYDKLASDARPVDGIGKTDLFQRPLPSMSTQSELLNDAQLEQLWSWVPVRYRGGAMQLLYSMAGHGSSVRTLFSRCGANEPLIIIVRSLEGKILGAYLPKSFEQRATDGGRTAEGRRTDGYFGTGETFVFSFSGDRGERFEWVGASVSLSASGESAQLDPPDFFAHASDHYIGIGGQKGLSVNERKKHALWLDVGLGKAASHRCDTFSNEPLHGVEGEFDIGAMEIYAAVNSIANSNP* # PASA_UPDATE: g11873.t1, single gene model update, valid-1, status:[pasa:asmbl_3465,status:12],[pasa:asmbl_3466,status:12], valid-1 NODE_2088_length_7793_cov_41.8419 . gene 6343 7793 . - . ID=g11873;Name=g11873.t1 NODE_2088_length_7793_cov_41.8419 . mRNA 6343 7793 . - . ID=g11873.t1;Parent=g11873;Name=g11873.t1 NODE_2088_length_7793_cov_41.8419 . five_prime_UTR 7792 7793 . - . ID=g11873.t1.utr5p1;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . exon 7250 7793 . - . ID=g11873.t1.exon1;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . CDS 7250 7791 . - 0 ID=cds.g11873.t1;Parent=g11873.t1;5_prime_partial=true NODE_2088_length_7793_cov_41.8419 . exon 6779 6955 . - . ID=g11873.t1.exon2;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . CDS 6779 6955 . - 1 ID=cds.g11873.t1;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . exon 6343 6530 . - . ID=g11873.t1.exon3;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . CDS 6365 6530 . - 1 ID=cds.g11873.t1;Parent=g11873.t1 NODE_2088_length_7793_cov_41.8419 . three_prime_UTR 6343 6364 . - . ID=g11873.t1.utr3p1;Parent=g11873.t1 #PROT g11873.t1 g11873 AVVVDVGGVYEPAENKFDHHQNTFTGTFSDKYSTKLSSAGLVYKHYGGEVIRNLLTREGLAVGITDAHIGVVYERTYKNFMEHIDANDNGKSVASDGITLYNISTHLSARVGRLNPSWNEVSSSDVENAQFRKAMALTGAEFEDSVIRMVRHWLPARSIVEEAVATRFSVDGSGQVIALPRFAPWSDHLFEIEAEQGLEGVIKFVLFTDTSGMHRIQAVPATPGSFALRHGLAKEWRGLRDAELSQVSGIAGTDFVHAGGFIGGGKTRETVVEMARRSLSADGDSADAKRQRVE* # ORIGINAL: g11870.t1 original gene structure, not modified by PASA NODE_2088_length_7793_cov_41.8419 AUGUSTUS gene 212 669 . - . ID=g11870;Name=g11870.t1 NODE_2088_length_7793_cov_41.8419 AUGUSTUS mRNA 212 669 . - . ID=g11870.t1;Parent=g11870;Name=g11870.t1 NODE_2088_length_7793_cov_41.8419 AUGUSTUS exon 597 669 . - . ID=g11870.t1.exon1;Parent=g11870.t1 NODE_2088_length_7793_cov_41.8419 AUGUSTUS CDS 597 669 . - 0 ID=cds.g11870.t1;Parent=g11870.t1 NODE_2088_length_7793_cov_41.8419 AUGUSTUS exon 212 366 . - . ID=g11870.t1.exon2;Parent=g11870.t1 NODE_2088_length_7793_cov_41.8419 AUGUSTUS CDS 212 366 . - 2 ID=cds.g11870.t1;Parent=g11870.t1 #PROT g11870.t1 g11870 MARMAISAVLAVAVVVFILAVDCRAASYACQDTWFGDDSNWTLNDTLLWDERKNEEGISVYTRGSLISDFVLFKV* # PASA_UPDATE: g11872.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3463,status:13],[pasa:asmbl_3469,status:12], valid-1 # PASA_UPDATE: g11872.t1, single gene model update, valid-1, status:[pasa:asmbl_3464,status:12],[pasa:asmbl_3468,status:12],[pasa:asmbl_3470,status:12], valid-1 NODE_2088_length_7793_cov_41.8419 . gene 2717 5741 . + . ID=g11872;Name=g11872.t1 NODE_2088_length_7793_cov_41.8419 . mRNA 2717 5261 . + . ID=g11872.t1.1.5b6be70b;Parent=g11872;Name=g11872.t1 NODE_2088_length_7793_cov_41.8419 . five_prime_UTR 2717 3472 . + . ID=g11872.t1.1.5b6be70b.utr5p1;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . exon 2717 3633 . + . ID=g11872.t1.1.5b6be70b.exon1;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . CDS 3473 3633 . + 0 ID=cds.g11872.t1.1.5b6be70b;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . exon 3962 4169 . + . ID=g11872.t1.1.5b6be70b.exon2;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . CDS 3962 4169 . + 1 ID=cds.g11872.t1.1.5b6be70b;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . exon 4378 4970 . + . ID=g11872.t1.1.5b6be70b.exon3;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . CDS 4378 4970 . + 0 ID=cds.g11872.t1.1.5b6be70b;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . exon 5150 5261 . + . ID=g11872.t1.1.5b6be70b.exon4;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . CDS 5150 5261 . + 1 ID=cds.g11872.t1.1.5b6be70b;Parent=g11872.t1.1.5b6be70b NODE_2088_length_7793_cov_41.8419 . mRNA 2717 5741 . + . ID=g11872.t1;Parent=g11872;Name=g11872.t1 NODE_2088_length_7793_cov_41.8419 . five_prime_UTR 2717 3060 . + . ID=g11872.t1.utr5p1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . exon 2717 3133 . + . ID=g11872.t1.exon1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . CDS 3061 3133 . + 0 ID=cds.g11872.t1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . exon 3399 3633 . + . ID=g11872.t1.exon2;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . CDS 3399 3633 . + 2 ID=cds.g11872.t1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . exon 3962 4169 . + . ID=g11872.t1.exon3;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . CDS 3962 4169 . + 1 ID=cds.g11872.t1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . exon 4378 4970 . + . ID=g11872.t1.exon4;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . CDS 4378 4970 . + 0 ID=cds.g11872.t1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . exon 5150 5741 . + . ID=g11872.t1.exon5;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . CDS 5150 5261 . + 1 ID=cds.g11872.t1;Parent=g11872.t1 NODE_2088_length_7793_cov_41.8419 . three_prime_UTR 5262 5741 . + . ID=g11872.t1.utr3p1;Parent=g11872.t1 #PROT g11872.t1.1.5b6be70b g11872 MKYRWQLALAMLNCTDMCDKKKLCVSLLHIFEFHNKLPDFLCFVVKNDLDTRTWRSFLNGATTSRELLFHFVGVCGNNFFVETSRFFVTDIVNSQLSSSAIDNDAFWELMRASCEKYLGEMLRVLATCPYYLRVIFRRLSRVFSAHDAPHPPHVIVSYIIFNFFYRPIIMNPNSHGLLRSTPSEKAQMILAFVGQFFALVGGGMVIKPPIVCREPFLSFINSNQERCFAAVKDLMVLPVLSLRELAARRVVQSGIDWKDIAIPEILKDDLTSLTYVRPSQKKFALFFVQSYFDEKAPQICDSLMQLCQRDNPSASFLKKGGWLGPPKLDAIRLQRLFFQHIDRPDMDKVAQQLTHYL* #PROT g11872.t1 g11872 MGAGAAFGRRRRERKIAPTIVSFLTPRELQPAVTAVSLQRRGENIEVLLMKYRWQLALAMLNCTDMCDKKKLCVSLLHIFEFHNKLPDFLCFVVKNDLDTRTWRSFLNGATTSRELLFHFVGVCGNNFFVETSRFFVTDIVNSQLSSSAIDNDAFWELMRASCEKYLGEMLRVLATCPYYLRVIFRRLSRVFSAHDAPHPPHVIVSYIIFNFFYRPIIMNPNSHGLLRSTPSEKAQMILAFVGQFFALVGGGMVIKPPIVCREPFLSFINSNQERCFAAVKDLMVLPVLSLRELAARRVVQSGIDWKDIAIPEILKDDLTSLTYVRPSQKKFALFFVQSYFDEKAPQICDSLMQLCQRDNPSASFLKKGGWLGPPKLDAIRLQRLFFQHIDRPDMDKVAQQLTHYL* # PASA_UPDATE: g11871.t1, single gene model update, valid-1, status:[pasa:asmbl_3467,status:3], valid-1 NODE_2088_length_7793_cov_41.8419 . gene 877 2325 . + . ID=g11871;Name=g11871.t1 NODE_2088_length_7793_cov_41.8419 . mRNA 877 2325 . + . ID=g11871.t1;Parent=g11871;Name=g11871.t1 NODE_2088_length_7793_cov_41.8419 . five_prime_UTR 877 942 . + . ID=g11871.t1.utr5p1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . exon 877 1252 . + . ID=g11871.t1.exon1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . CDS 943 1252 . + 0 ID=cds.g11871.t1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . exon 1382 1439 . + . ID=g11871.t1.exon2;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . CDS 1382 1439 . + 2 ID=cds.g11871.t1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . exon 1628 1834 . + . ID=g11871.t1.exon3;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . CDS 1628 1834 . + 1 ID=cds.g11871.t1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . exon 2015 2325 . + . ID=g11871.t1.exon4;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . CDS 2015 2168 . + 1 ID=cds.g11871.t1;Parent=g11871.t1 NODE_2088_length_7793_cov_41.8419 . three_prime_UTR 2169 2325 . + . ID=g11871.t1.utr3p1;Parent=g11871.t1 #PROT g11871.t1 g11871 MPSYTFPSSPWRSFRAHCVTLTAATFALTFILTATRFMDIASSFHTIRTAWDGEAIDPSEYVHVRTFPEGSVVWIEVEAPFFKSPASPPCPAGESCPELWNYEVVEVFFLGDKDRYLEIELCPYGQYIGLLLNGVRNVYTDKLVLTDFVAEVSPDGKRWRGKTSLPSDFFAPGTDRFNAYAIHGEGDNRVYRSLFPATKDANHTSPDFHRLEFFGAIDDAKLQHYFANLPPSKYWGNLTSTI* # ORIGINAL: g427.t1 original gene structure, not modified by PASA NODE_3962_length_2447_cov_38.9608 AUGUSTUS gene 221 1498 . - . ID=g427;Name=g427.t1 NODE_3962_length_2447_cov_38.9608 AUGUSTUS mRNA 221 1498 . - . ID=g427.t1;Parent=g427;Name=g427.t1 NODE_3962_length_2447_cov_38.9608 AUGUSTUS exon 221 1498 . - . ID=g427.t1.exon1;Parent=g427.t1 NODE_3962_length_2447_cov_38.9608 AUGUSTUS CDS 221 1498 . - 0 ID=cds.g427.t1;Parent=g427.t1 #PROT g427.t1 g427 MTQSAPASFSSLPIEVVERHIVSFLSNVDCASLACVNSRLRCALRHMRVYILRRAFAKQYAESTAFRNALWAHIPRHRLSLNLSGATVDVSSLDGVRSLNLSDCKQLTDVSALGGVHFLNLSGCCRVTDVSSLGGVHSLNLTGCYGVTDVSALGSVHSLDLSYCEGVLDVSALGGVHWLNLKYCDNVTDVSTLGGVHSLNLTGCKGVTNASALGGVHSLNLSRCEKVADVSALGGVHSLDLTGCNGVADVSALGSVHSLNLSRCEKVVDVSALGGVHSLDLSGCAQVATVSALHSVHSLNLTNCEKVTEVSMLGGVHSLSLAFCDKVTDVSALGGVHSLNLTGCSRVTDVSALGGVHSLCLSYCFGVTDVSALRGVHFLDLSGCTGVTNAYAGGALLSVDLSRLCTRPCRQVEDPPIASSQSAWC* # ORIGINAL: g3119.t1 original gene structure, not modified by PASA NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS gene 184 892 . - . ID=g3119;Name=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS mRNA 184 892 . - . ID=g3119.t1;Parent=g3119;Name=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS exon 817 892 . - . ID=g3119.t1.exon1;Parent=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS CDS 817 892 . - 0 ID=cds.g3119.t1;Parent=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS exon 501 613 . - . ID=g3119.t1.exon2;Parent=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS CDS 501 613 . - 2 ID=cds.g3119.t1;Parent=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS exon 184 365 . - . ID=g3119.t1.exon3;Parent=g3119.t1 NODE_5093_length_1026_cov_35.2008_potentialcontaminant AUGUSTUS CDS 184 365 . - 0 ID=cds.g3119.t1;Parent=g3119.t1 #PROT g3119.t1 g3119 MPSRRHFATTLFSTDEEANDVVSEFALRRRQFTDDGSSSSSQSKPAHIVQVQGGGGGQAQRQQSVPQRQASNNAAADVPTANASAAKAPASTNGAASRPTSVHSALSALDWNNGGAHEAAPSP # ORIGINAL: g5597.t1 original gene structure, not modified by PASA NODE_4135_length_2139_cov_14.0954 AUGUSTUS gene 571 1666 . - . ID=g5597;Name=g5597.t1 NODE_4135_length_2139_cov_14.0954 AUGUSTUS mRNA 571 1666 . - . ID=g5597.t1;Parent=g5597;Name=g5597.t1 NODE_4135_length_2139_cov_14.0954 AUGUSTUS exon 1141 1666 . - . ID=g5597.t1.exon1;Parent=g5597.t1 NODE_4135_length_2139_cov_14.0954 AUGUSTUS CDS 1141 1666 . - 0 ID=cds.g5597.t1;Parent=g5597.t1 NODE_4135_length_2139_cov_14.0954 AUGUSTUS exon 571 872 . - . ID=g5597.t1.exon2;Parent=g5597.t1 NODE_4135_length_2139_cov_14.0954 AUGUSTUS CDS 571 872 . - 2 ID=cds.g5597.t1;Parent=g5597.t1 #PROT g5597.t1 g5597 MSVAPLTVSKEVPEICHPTTFEAYPHHDSTACKSLSVAATDLLAFVKKLSSSLQEKYRVELIRVPCVTESRWRMCVKLDPVAWYDHLKGDVGRTNADSMARNYVNKMRDEARNRPAVDPSEHAVVTIPKYCTNVPCKSGKACRCKHSRACQTTIMRAGCERVCGFFVVDELHLKNDCLEGIAANFGKWETANSLDTSASEYALDCHGHIHLLLSRACIDRLAKSSGGNAAKGRVQHPPSHMEEDLNSLELTRLAPNMAHSQGATSWEDSRAARMT* # ORIGINAL: g617.t1 original gene structure, not modified by PASA NODE_1230_length_12881_cov_39.1801 AUGUSTUS gene 12115 12804 . + . ID=g617;Name=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS mRNA 12115 12804 . + . ID=g617.t1;Parent=g617;Name=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS exon 12115 12217 . + . ID=g617.t1.exon1;Parent=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS CDS 12115 12217 . + 0 ID=cds.g617.t1;Parent=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS exon 12388 12637 . + . ID=g617.t1.exon2;Parent=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS CDS 12388 12637 . + 2 ID=cds.g617.t1;Parent=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS exon 12741 12804 . + . ID=g617.t1.exon3;Parent=g617.t1 NODE_1230_length_12881_cov_39.1801 AUGUSTUS CDS 12741 12804 . + 1 ID=cds.g617.t1;Parent=g617.t1 #PROT g617.t1 g617 MDGRGRGGNRHGPHKKGPIASQDAAREKQRDSRSGVRKNNREKLLFAKRMRVDDGQDDDDMEQQDEVLTAERAAADIAALPALLTLLQSRKQPERIQSLRKIRRAFAVATAFREAFIRTEGAPLALVNILASSHEAEEQ # PASA_UPDATE: g615.t1, single gene model update, valid-1, status:[pasa:asmbl_882,status:3], valid-1 NODE_1230_length_12881_cov_39.1801 . gene 3267 6551 . + . ID=g615;Name=g615.t1 NODE_1230_length_12881_cov_39.1801 . mRNA 3267 6551 . + . ID=g615.t1;Parent=g615;Name=g615.t1 NODE_1230_length_12881_cov_39.1801 . five_prime_UTR 3267 3380 . + . ID=g615.t1.utr5p1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 3267 3484 . + . ID=g615.t1.exon1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 3381 3484 . + 0 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 3665 3790 . + . ID=g615.t1.exon2;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 3665 3790 . + 1 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 3939 4047 . + . ID=g615.t1.exon3;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 3939 4047 . + 1 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 4534 4785 . + . ID=g615.t1.exon4;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 4534 4785 . + 0 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 5126 5784 . + . ID=g615.t1.exon5;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 5126 5784 . + 0 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . exon 5954 6551 . + . ID=g615.t1.exon6;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . CDS 5954 6062 . + 1 ID=cds.g615.t1;Parent=g615.t1 NODE_1230_length_12881_cov_39.1801 . three_prime_UTR 6063 6551 . + . ID=g615.t1.utr3p1;Parent=g615.t1 #PROT g615.t1 g615 MAEASKPRLSFWKQLPLPDGWEECQDEDGRNFYVDHNNRKTQWIDPRDSQEHRRTEEDLPYGWDMINDPVIGLYFCDHMNCRNVLEDPRKSEEYKKRLAEFEKLVVAEKDKQQIRFRTLREKKAQVQDLEDLVNEDMQRKLTLEEQLAQQEADEAAAAKMKLEIQALESNIEVMNAALEQEKEETIQLKEETEEAEKVLKDLEDLKAAIHIDEKDELVAARKANEELQAAKSEYERERAERLTLEKAIRELTDEPEFRAMIAHGDAGGDIDHEIAAARAAEAVSDNQRDDHDVRNRLELGLELVTLRNLIEQQRKEVEELKRLKVALEANPESERRPSHTPSSSGGLTVDGVSRRRSSSTPRPAEDEFDPVTGLRRTRGAELGDKMKNYKGKNWRGTLRKVHKQEARTFKTDGLTFTQKLEYFRKLIETEDPTKKADGAADAAVDAAAAPSS* # PASA_UPDATE: g616.t1, single gene model update, valid-1, status:[pasa:asmbl_881,status:12], valid-1 NODE_1230_length_12881_cov_39.1801 . gene 7161 11256 . - . ID=g616;Name=g616.t1 NODE_1230_length_12881_cov_39.1801 . mRNA 7161 11256 . - . ID=g616.t1;Parent=g616;Name=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 11059 11256 . - . ID=g616.t1.exon1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 11059 11256 . - 0 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 10698 10878 . - . ID=g616.t1.exon2;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 10698 10878 . - 0 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 10286 10401 . - . ID=g616.t1.exon3;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 10286 10401 . - 2 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 9882 9927 . - . ID=g616.t1.exon4;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 9882 9927 . - 0 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 9551 9675 . - . ID=g616.t1.exon5;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 9551 9675 . - 2 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 9199 9322 . - . ID=g616.t1.exon6;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 9199 9322 . - 0 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . exon 7161 9019 . - . ID=g616.t1.exon7;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . CDS 7410 9019 . - 2 ID=cds.g616.t1;Parent=g616.t1 NODE_1230_length_12881_cov_39.1801 . three_prime_UTR 7161 7409 . - . ID=g616.t1.utr3p1;Parent=g616.t1 #PROT g616.t1 g616 MASSSPSAGTEGAPRTPLRKISTAGSSTDVRVEDMRRFGMYTLEKTIGKGNFAVVKLAVHHVTQARVAIKIIDKSKLDDDSLRKIRREIQIMKLLSHPHIVRLYQVLETDRMLYLVTEYASGGEIFDHLVAHGRMNEREARKKFKQILSAVEYCHKRKVVHRDLKAENLLLDETLSIKIADFGFSNYFEPGQGLKTWCGSPPYAAPELFEGKEYTGPEVDIWSLGVVLYVLVCGSLPFDGSSLQKLRARVLAGKFKIPFFMSTECEHLIKRMLVMEPKQRYTIDQIKRHKWTAMDGEPMPPSEDDGTLDLPINDKVLAQMESLGIPRSAVLASIESGGFDHNAATYYLLLERLQRMTSTKSDAAGAGITPHQLEQLTKQQGGLRPSASAHDSGVSGVLAALQPLPSASSTGPVTIPPASPFALAAAAGLSSGNDRQDSAAGSSRPQSSSSSSGTTAQQPPSTVSALQAASVLPASRLPRPHVRRHTVDPTNPSAPQPGAFGASVPTGMAVQSGVTPVQSPHSITRVQASLVPATQVQQSAASPTTADATPRSRSTSVASQRSGSAGLRGIPEAVVEPIHPSATEPTLATAPGDASTQGSDSPRTALQDRQRAAVAAAAQALSKADTDEWDGAGAPSHADAKLHIPMRTHLRRHTVQSQRDAGAEAAAMAAVAVTGSPTVSAGGAVPGSPASSSAPSGLDGGDARSKGPRSMRFAMSVNMTSTRAVGDIQVEIRRVLENEGMAFEESDYAFVLERGEVRMEIEVCQLPRLSINGLRLKRIAGNTWDYKKLCTDLLSKMSL* # PASA_UPDATE: g614.t1, single gene model update, valid-1, status:[pasa:asmbl_880,status:12], valid-1 NODE_1230_length_12881_cov_39.1801 . gene 205 2343 . - . ID=g614;Name=g614.t1 NODE_1230_length_12881_cov_39.1801 . mRNA 205 2343 . - . ID=g614.t1;Parent=g614;Name=g614.t1 NODE_1230_length_12881_cov_39.1801 . five_prime_UTR 2081 2343 . - . ID=g614.t1.utr5p1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 1838 2343 . - . ID=g614.t1.exon1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 1838 2080 . - 0 ID=cds.g614.t1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 1517 1586 . - . ID=g614.t1.exon2;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 1517 1586 . - 0 ID=cds.g614.t1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 1276 1363 . - . ID=g614.t1.exon3;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 1276 1363 . - 2 ID=cds.g614.t1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 787 1000 . - . ID=g614.t1.exon4;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 787 1000 . - 1 ID=cds.g614.t1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 512 566 . - . ID=g614.t1.exon5;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 512 566 . - 0 ID=cds.g614.t1;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . exon 205 289 . - . ID=g614.t1.exon6;Parent=g614.t1 NODE_1230_length_12881_cov_39.1801 . CDS 205 289 . - 2 ID=cds.g614.t1;Parent=g614.t1;3_prime_partial=true #PROT g614.t1 g614 MARQMGLLPSQRRERARYDEDEEWDFFDSARGSHRSGAGTGATPTTFDYSGSDRDTGDHSMASSSFMGCETSSVMSFGYEEEFDHKSTEKVRCLFEEIDDTLYRDAPSAKVDGGRSKATADECNLWASTFCHLRMRGVGLVPALEDGVQLIQTAAPIHDGPPPAAPVPLDAASAHAAQHHQHVGVEGLVGVDELDDLSIRGTRAEIRQVSATRSVDGKADATAEDANRFAFLEEEIFAIDGDVEENFAKDE # PASA_UPDATE: g7892.t1, single gene model update, valid-1, status:[pasa:asmbl_8692,status:12],[pasa:asmbl_8693,status:12], valid-1 NODE_651_length_19576_cov_53.7803 . gene 206 1974 . - . ID=g7892;Name=g7892.t1 NODE_651_length_19576_cov_53.7803 . mRNA 206 1974 . - . ID=g7892.t1;Parent=g7892;Name=g7892.t1 NODE_651_length_19576_cov_53.7803 . five_prime_UTR 1705 1974 . - . ID=g7892.t1.utr5p1;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . exon 1585 1974 . - . ID=g7892.t1.exon1;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . CDS 1585 1704 . - 0 ID=cds.g7892.t1;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . exon 1085 1349 . - . ID=g7892.t1.exon2;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . CDS 1085 1349 . - 0 ID=cds.g7892.t1;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . exon 507 769 . - . ID=g7892.t1.exon3;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . CDS 507 769 . - 2 ID=cds.g7892.t1;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . exon 206 336 . - . ID=g7892.t1.exon4;Parent=g7892.t1 NODE_651_length_19576_cov_53.7803 . CDS 206 336 . - 0 ID=cds.g7892.t1;Parent=g7892.t1;3_prime_partial=true #PROT g7892.t1 g7892 MNAISAVDEMVREYLLFRGFTSALRAFDAEAKVDREKGFQAEKIVDHIFSFITAYDIVGLKDFWGHLDQRFFSRLDNSYANSIRKLDVCLHRYYIVYAIQNGRHDKVLEFFDKFGADFHSQPDWRDWFVVPFVKSPELMPTFETFFSKQWLETFTLSLSNFLSTVFQGLPPPTLLSFNADRMRRRALEEEIDMLRSAARSKKSDADIPDMPDKTPKPGRRLGPDMISPRREVKATNFWEIMGGRDLRDESRDEYVATAR # ORIGINAL: g7895.t1 original gene structure, not modified by PASA NODE_651_length_19576_cov_53.7803 AUGUSTUS gene 14228 15423 . + . ID=g7895;Name=g7895.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS mRNA 14228 15423 . + . ID=g7895.t1;Parent=g7895;Name=g7895.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS exon 14228 14317 . + . ID=g7895.t1.exon1;Parent=g7895.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS CDS 14228 14317 . + 0 ID=cds.g7895.t1;Parent=g7895.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS exon 14788 15423 . + . ID=g7895.t1.exon2;Parent=g7895.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS CDS 14788 15423 . + 0 ID=cds.g7895.t1;Parent=g7895.t1 #PROT g7895.t1 g7895 MGTYPASAAHATQCPTQLEAHLDSTLRLLKTLSRPLSSTELKAVAEIIQFASAIPAGGMTGVYENRPDQPLYRGAFTDHLPHTNDVNPTFAYRGGLSVPSYAPCTSPAADAAAWSMPPHQLPLPPEVVCSLTTFASAIPAGGMAGVYENRPDQPLYRGAFTDHLPHTNDVSPTFAYQGGLSVPSYAPCTAPAADAAAWSMLGPAQLRPPEFVCSLLGMSLDEYLLPLTTQATKTTIDVTLD* # ORIGINAL: g7894.t1 original gene structure, not modified by PASA NODE_651_length_19576_cov_53.7803 AUGUSTUS gene 8576 10756 . + . ID=g7894;Name=g7894.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS mRNA 8576 10756 . + . ID=g7894.t1;Parent=g7894;Name=g7894.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS exon 8576 8741 . + . ID=g7894.t1.exon1;Parent=g7894.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS CDS 8576 8741 . + 0 ID=cds.g7894.t1;Parent=g7894.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS exon 8991 10756 . + . ID=g7894.t1.exon2;Parent=g7894.t1 NODE_651_length_19576_cov_53.7803 AUGUSTUS CDS 8991 10756 . + 2 ID=cds.g7894.t1;Parent=g7894.t1 #PROT g7894.t1 g7894 MASDYSLGVCKSAVASLLRNAGFQHVHTDALDAFADCMGRFVQDIGRISTDYAELCGRSSVNLVDVHAAFRDLDITALDTHQAALDCEGLALPHPAFPAAIPAPRRHAPRFPRPEWEGQFPPVPDLDAPVGMEVTGHGEVAVAPSSDAEDEGDEEDEGFESSGVLMASPPRLSSSMWIPYGDVSTDLKVIEREIAVPKPSVKLKIVSKKKVLKVRLKVHAPPPINPIKLVLAAPQSGAMSPTDRAMSPARGGAGSPSRARQMSPPAKYSPTRSPRSRQMSPAAPPSRAGDARSPSRHAMSPSRSQRASSPLSPKSPRYNSDDWPERLDEPGQYSPTHSDAPSATSRRRTPAVPVNGTSWDDRPAPDVQEDRRDQPASKTAKPALTHQDSKPVVLKIVSNTSESISAGAASHAPSAAASKRPSRAGSRADSPAVSPPTNAMPARGGGSPSTQGNGHDARKNDQRRKSAPANPRKREPEEARGKDTAGNRASESPHVLKFKFSAPSDGSKHNANAGPKSDKSDKGGKSSKSDKGDKGGKSGTPAAPMLRLKLVPTPPVPTPPVPTPPAEEAGVRYCVNNCRYGGKDVPGITMYECSVEGCGLWYHYECLNEKRTRAQLEEDDFICPVCTKSKRETAATKGKNGKR* # PASA_UPDATE: g7896.t1, single gene model update, valid-1, status:[pasa:asmbl_8694,status:12], valid-1 NODE_651_length_19576_cov_53.7803 . gene 15586 19430 . - . ID=g7896;Name=g7896.t1 NODE_651_length_19576_cov_53.7803 . mRNA 15586 19430 . - . ID=g7896.t1;Parent=g7896;Name=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 19341 19430 . - . ID=g7896.t1.exon1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 19341 19430 . - 0 ID=cds.g7896.t1;Parent=g7896.t1;5_prime_partial=true NODE_651_length_19576_cov_53.7803 . exon 18886 19075 . - . ID=g7896.t1.exon2;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 18886 19075 . - 0 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 18475 18591 . - . ID=g7896.t1.exon3;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 18475 18591 . - 2 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 18003 18081 . - . ID=g7896.t1.exon4;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 18003 18081 . - 2 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 17454 17551 . - . ID=g7896.t1.exon5;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 17454 17551 . - 1 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 17112 17247 . - . ID=g7896.t1.exon6;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 17112 17247 . - 2 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 16808 16907 . - . ID=g7896.t1.exon7;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 16808 16907 . - 1 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 16373 16576 . - . ID=g7896.t1.exon8;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 16373 16576 . - 0 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . exon 15586 16061 . - . ID=g7896.t1.exon9;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . CDS 15858 16061 . - 0 ID=cds.g7896.t1;Parent=g7896.t1 NODE_651_length_19576_cov_53.7803 . three_prime_UTR 15586 15857 . - . ID=g7896.t1.utr3p1;Parent=g7896.t1 #PROT g7896.t1 g7896 VNEYIVHEVIGRGAFGVVKRVTNTSDNLDYAMKELSKGMLERKRFGLGQQGKRPHNAMEDVRREIAILKKLQHPNVVQLIEVMDDPTQDHLYMVFELIQNGTVMDLNKKKDQPFAEETARQYFRDIVMGIEYLHNKCIVHRDIKPDNLLLTGEGRVKISDFGVSEDFHDAGNDMITRSVGSCAFWAPEMCTAGVTEYHGRPIDVWAMGITLYAFVVGHVPFEMPSTIQLFEAIRLSDPAFPESMNPFLRNLLSGMLQKLPGERLTIPQIRTHAWITKEGTDPLPENLSVAENLPKTAFTQRELRRSIRSVDSRLSFRRIGKNGGLAKSESSVLEVPASNPTNICIVVTEPGGSSPPAPELHSHPSSMPPSRAPSEPNIPEAGETLNSRCLDALTEVMSPPAVRID* # PASA_UPDATE: g7893.t1, single gene model update, valid-1, status:[pasa:asmbl_8695,status:3], valid-1 NODE_651_length_19576_cov_53.7803 . gene 2233 8194 . + . ID=g7893;Name=g7893.t1 NODE_651_length_19576_cov_53.7803 . mRNA 2233 8194 . + . ID=g7893.t1;Parent=g7893;Name=g7893.t1 NODE_651_length_19576_cov_53.7803 . five_prime_UTR 2233 2552 . + . ID=g7893.t1.utr5p1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 2233 2784 . + . ID=g7893.t1.exon1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 2553 2784 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 2901 3200 . + . ID=g7893.t1.exon2;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 2901 3200 . + 2 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 3411 3538 . + . ID=g7893.t1.exon3;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 3411 3538 . + 2 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 3799 3927 . + . ID=g7893.t1.exon4;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 3799 3927 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 4175 4726 . + . ID=g7893.t1.exon5;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 4175 4726 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 4822 4953 . + . ID=g7893.t1.exon6;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 4822 4953 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 5193 5562 . + . ID=g7893.t1.exon7;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 5193 5562 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 5788 5877 . + . ID=g7893.t1.exon8;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 5788 5877 . + 2 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 6072 6181 . + . ID=g7893.t1.exon9;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 6072 6181 . + 2 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 6397 6455 . + . ID=g7893.t1.exon10;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 6397 6455 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 6599 6996 . + . ID=g7893.t1.exon11;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 6599 6996 . + 1 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 7283 7368 . + . ID=g7893.t1.exon12;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 7283 7368 . + 2 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 7594 7706 . + . ID=g7893.t1.exon13;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 7594 7706 . + 0 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . exon 7844 8194 . + . ID=g7893.t1.exon14;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . CDS 7844 7976 . + 1 ID=cds.g7893.t1;Parent=g7893.t1 NODE_651_length_19576_cov_53.7803 . three_prime_UTR 7977 8194 . + . ID=g7893.t1.utr3p1;Parent=g7893.t1 #PROT g7893.t1 g7893 MASAMRPPPREDMLRRMRSSEGSSKRSANTARPPQPRTLPASELLRLPAVMKQETSGAINALSMSPDSTRIVVAGRDVLKIYGVEEDHMDELLNFRTGKMNLNYCSVDVAWHPMEAFSNVVATAATNGKVVLWDANADNSQKQGLVLEEHTRTVNRVAFHPRDGSMLVSGSQDGTMKGWDIRTGKSVYTLTGRAESVRDVQFNPHTPDLLAAGFETGILQIWDLRKLAAVEKMTAHHGPIFSVDWHPHEATVLASAGRDKIIKVWDTSTATRPTSTNSVQTIASVARVKWRPGYPNQIASCALLVDFNIHLWDLERPHIPYYTFDQHRDVVTGFLWRSDPNYANAEHYLLSSSKDTTLVLRSVSRGGYRPIDKTSTVSIGWNNRGDISFACSPRAWGDESAGQLGPSKSMQIRRSTKTDAAVGSGTVAKRSVVRVAVPTLYGDPATLASLVAPGFAIPGSPVDTRDVFVWLATKYRLHGASVDELCEHNANIAREAMQYQIAQTWLFVRLFLRPLDTENGDSESDSGLPSSAASTEGSFSRFESETNGDGDNTLNNSGHFQGGPGARDARGSAGYAHAGLNLDERGGQFRRGNGRGDYFGGESSAMEKGMYDDGVADDGASDVLRGVDDIGSSDGQSLLAHSERGIFLDGQLLNDATTPIDDITEDSLFTADNDSLWYSGTDGLRGSPVPDKAADATRKGSVQSVPHQPSNQRGSLVPQQSDASIQSDLQRTVHTISLARQSAHAAPSTRAQQQQPPPKSSLTAAALKAAASRLNPSYAPRLFDATPLVREMLGYYAAQGDVQTCASLILVCGAALKDEASVRLHEAWILSYLDMLHRYELWSVSAEIIKICKTNSINGLSQNSTTVHTACNHCMKPLVHKGWVCDRDRCRKITSTCTICRQVVRGVYVWCQSCGHGGHPDHMAEWFSKHTACPAGCSHQCTF* # PASA_UPDATE: g6833.t1, single gene model update, valid-1, status:[pasa:asmbl_9783,status:12], valid-1 NODE_871_length_16497_cov_42.8038 . gene 11350 15907 . - . ID=g6833;Name=g6833.t1 NODE_871_length_16497_cov_42.8038 . mRNA 11350 15907 . - . ID=g6833.t1;Parent=g6833;Name=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 15853 15907 . - . ID=g6833.t1.exon1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 15853 15907 . - 0 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 15359 15499 . - . ID=g6833.t1.exon2;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 15359 15499 . - 2 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 15023 15135 . - . ID=g6833.t1.exon3;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 15023 15135 . - 2 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 14612 14752 . - . ID=g6833.t1.exon4;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 14612 14752 . - 0 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 14208 14484 . - . ID=g6833.t1.exon5;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 14208 14484 . - 0 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 13173 13984 . - . ID=g6833.t1.exon6;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 13173 13984 . - 2 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 12799 12866 . - . ID=g6833.t1.exon7;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 12799 12866 . - 0 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 12430 12544 . - . ID=g6833.t1.exon8;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 12430 12544 . - 1 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 11950 12076 . - . ID=g6833.t1.exon9;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 11950 12076 . - 0 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . exon 11350 11557 . - . ID=g6833.t1.exon10;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . CDS 11373 11557 . - 2 ID=cds.g6833.t1;Parent=g6833.t1 NODE_871_length_16497_cov_42.8038 . three_prime_UTR 11350 11372 . - . ID=g6833.t1.utr3p1;Parent=g6833.t1 #PROT g6833.t1 g6833 MAAYARREIGQLVIEDVPEFSDSLIERSAQYQNTRSAGVHGWIGDGILISTRFAETSQLHHVGGPGAYRRQLTFFTEPIASAAPAPVSSPLTGGFVYTKDKAGGGAEFYQIYAFDPLSGLSVLVTDGKQSKNGGVRWNRSGSAFAYFSTERNGTDFDIAVATVSPRVDGGPLLFTRRTLFASSGEGAGTGVWWRPLDFSPCGRRLLVNAYRSASDSSIHVLDVDSGRIIATVDGTPPHAASPDGAQTVSCDGALWTLDGNHVIFVSDRGADFRGLYVWQWDGVNGGAVVHAVADSTWLNWDVEDFDISCDGRHAVFTVNEDGISTVYNVAISGGTSADAPLVVSAAAKLDAELPVGCIHSVCFHPIWPASFAVTVDAADSPGDVYVANIGPAGPHSNTVFRWTFSEVGGLPRENFVVPKLIRYASFDGLSVPAFFYKPKGDRGKVPVVIHIHGGPESQARPGFRFNFQFLAVEMGVAVLDVNVRGSSGYGKRYLTLDFQGRRMDSARDIGALLDWIAAQPDLDAQRVGVLGGSYGGYMVLQALVQYGDRICAGAEMVGIANFVTFLENTQGYRKDLRRRVYGDERNPDMRKFLVDISPVTHASTIRSPLLVGQGLNDPRVPASEAQQIVDAVRANGKEVWYVVARNEGHGFAKKVNRDYWTNAVFSFFAKHLTDVSQ* # PASA_UPDATE: g6831.t1, single gene model update, valid-1, status:[pasa:asmbl_9782,status:12], valid-1 NODE_871_length_16497_cov_42.8038 . gene 1046 7232 . + . ID=g6831;Name=g6831.t1 NODE_871_length_16497_cov_42.8038 . mRNA 1046 7232 . + . ID=g6831.t1;Parent=g6831;Name=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 1046 4652 . + . ID=g6831.t1.exon1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 1046 4652 . + 0 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 4887 4963 . + . ID=g6831.t1.exon2;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 4887 4963 . + 2 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 5444 5482 . + . ID=g6831.t1.exon3;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 5444 5482 . + 0 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 5653 5902 . + . ID=g6831.t1.exon4;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 5653 5902 . + 0 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 6214 6403 . + . ID=g6831.t1.exon5;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 6214 6403 . + 2 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . exon 6614 7232 . + . ID=g6831.t1.exon6;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . CDS 6614 7127 . + 1 ID=cds.g6831.t1;Parent=g6831.t1 NODE_871_length_16497_cov_42.8038 . three_prime_UTR 7128 7232 . + . ID=g6831.t1.utr3p1;Parent=g6831.t1 #PROT g6831.t1 g6831 MYLISAVLFLASFDVAFLTGGVSCVALQSSWPATLRVNVVDYTSLEALVLDAVASLPSAGNGTVTVIIDTAGGSFSGPLCLSSTLPPASLVNASVALPSNTAVVLVPTEGYLGITVGQCSQRSFVLVGKNATLYISGASFTQCDASARACAVPEPTAGTPAFAVRESAHLVIVNATVHGMGALLDVSESATVSLVRSSVYSGRIVGGNWARVGGRGSLRVSDCTMDKIVSANAALIMTTESASISLEQVHIVRVSAVGLASLSSATSLVMKATYLEGYVGASSAIVLAGTAVAVMEDSTAVNVTGIGGTDGALISATNMARFWLRNTSITSVHAGASGGVLALDEQASGVVEACNITSTAAVTDGGFALIEALAILSVSESSFTDVQALARSGGVFIVISRGRLLASQCTFFGLNAHIDGGLVYLDGAGTAAFEGCTVENATAVRTGGAFALFGASYVDVLQSSFVGVVSMGTAALASLDGAATMRMADCDVTGSTSFTGIGGALSLTGQSTATIEASRLSLLTTFAGGGFASVDGESVLNVRGCTVTAATALVGFGGAFLGKLRSIINVTDSTFRNLTAWNGGGFAAITDVALMSVINCSVVASGVGVRFGGAFVVSAASRLVASNSYFSDSYSPSDGGFASLDGDTSAMLTNCTIVRTASIGGCGGALSLLGRSRAVVDNCQFLNISAGSDGGLACAYEASLLSLSRITVEGVQSASSGGVIACAGANVTIARSQLDGISSGDSGGVALVAGRCTLSIRDSTFVNPVARHLGTGLALGFGGYGGAFLVYGADAVMYASRLVVAGSASPVGGGGCIAVLLRARAVLEDSEIFNTFATLGGVVYAAAGSTVVARRVVVSSSTTLSHGGCIYADNSTVVLDHVTMHGCWAGRDPTSFGSGGTLFAENEAALQATGVIVNGTRAILGPGLYSWDGDYPALKGGVAFVGVADTLPARDLPPGWTVGSVWASGPRTLLSLPSTVPPVKSGGVLSTFELHLVDAYGHDISVPSASTLAIRISLEAITSGGMEVYDSDIAVVGDVERNFGTYALVSFTSLRLMAKPGRYRLRISSSNPLIYGKNDTSATRRNLLSNAVVPVAVSGCPPGEVLAQASLTASDNQLYWQCVANQPKRTDLDRIVPATVIPGLLIVAAVALLLRWQYVLHRRRRGRAIQDKFVKTHMGGKEWVQTVEIPRDAVELQTKLGEGEFGVVYKARVIVGGKPCICAAKMLKEGASYQERVVFVKEVEVMCPLKHVNVLSVCGFVVTEPMLLLLEFVPHGSLLAFVRSVPTTRRTHVTMAAMLRALALQIADGMSYLASMGVVHGDLAARNCLVGQDAFGEYVCKVADFGMARVLQAGQGSIYKKKSGSKIPIRWSSPEIFLTQAYSEKSDVWAFGVTCCEAYSFGATPYAHVPTAGVQRIIIRGDRPDCPPCCPADVFAAINECFAYLPDDRPVFAKVRAMLASTAAPVASLERRPSVSVVDTGYLKLDVSVSAGMAANADRALWGMSRPLSDMAGGLALTGNIVDPINVDALGLQSFTLSVISESHRIDEGAADATTSEL* # ORIGINAL: g6832.t1 original gene structure, not modified by PASA NODE_871_length_16497_cov_42.8038 AUGUSTUS gene 7660 10235 . + . ID=g6832;Name=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS mRNA 7660 10235 . + . ID=g6832.t1;Parent=g6832;Name=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS exon 7660 7734 . + . ID=g6832.t1.exon1;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS CDS 7660 7734 . + 0 ID=cds.g6832.t1;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS exon 8115 8269 . + . ID=g6832.t1.exon2;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS CDS 8115 8269 . + 0 ID=cds.g6832.t1;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS exon 8499 8995 . + . ID=g6832.t1.exon3;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS CDS 8499 8995 . + 1 ID=cds.g6832.t1;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS exon 9430 10235 . + . ID=g6832.t1.exon4;Parent=g6832.t1 NODE_871_length_16497_cov_42.8038 AUGUSTUS CDS 9430 10235 . + 2 ID=cds.g6832.t1;Parent=g6832.t1 #PROT g6832.t1 g6832 MQSVGRVARAVAAPIRRCSAVRLDASSSVHSCIVAPASSAFSAHTRHFRTTAASHETVQFKLADIGEGIAEAEVLQWFVKEGDHVTEFQKVCEVQSDKATVEITSRYHGIIRRLYYKRNDMAKVGSPLIDVELEGGADAGNDVPLTPPAAPVTDKTPGDSPAADAAGTADASSDKVLTTPAVRRIAKENRVNLALIRGTGRDGRILKEDIMAYVAGEPAGKLQPTQQAAPRQEYKVEVTATKPPTSPPREEPHVEMPRPLPTAPQQAGGAAPYVETGSRTEPIRGFKRTMVKTMVAANQVPHFGYSDEIVMNSLVGLRNDLRGEAERRGTKLSFMPFFIKAASLALRQYPVLNASVNADCTEITYHGDHNIGVAMDTPGGLVVPNIKRCQSLSIFEIAAELNRLQAVGAKGQFGASDLTGGTFTLSNIGTVGGTYTKPVIVVPEVAIGALGRMQTLPRYKSDGETLYPAKIVCVSWSADHRVIDGVTMAKFSNAWINYLQNPTAMLLDMK* # ORIGINAL: g3423.t1 original gene structure, not modified by PASA NODE_1818_length_9087_cov_38.6093 AUGUSTUS gene 1232 5151 . - . ID=g3423;Name=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS mRNA 1232 5151 . - . ID=g3423.t1;Parent=g3423;Name=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 4710 5151 . - . ID=g3423.t1.exon1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 4710 5151 . - 0 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 4457 4545 . - . ID=g3423.t1.exon2;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 4457 4545 . - 2 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 4059 4235 . - . ID=g3423.t1.exon3;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 4059 4235 . - 0 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 3509 3661 . - . ID=g3423.t1.exon4;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 3509 3661 . - 0 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 2970 3117 . - . ID=g3423.t1.exon5;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 2970 3117 . - 0 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 2681 2760 . - . ID=g3423.t1.exon6;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 2681 2760 . - 2 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 2163 2340 . - . ID=g3423.t1.exon7;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 2163 2340 . - 0 ID=cds.g3423.t1;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 1232 1794 . - . ID=g3423.t1.exon8;Parent=g3423.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 1232 1794 . - 2 ID=cds.g3423.t1;Parent=g3423.t1 #PROT g3423.t1 g3423 MDSSRADVDPRREAQQRAFDRPPASPPPAKRFKADPHQHRGDAAVAQVDARSGFVSTNETHMDGTATTTDMHRDGGATTISTTITANIPLSHAANGASELHAHAANGGCCGTHADSGDEDGESQSQSSDEDEDEDGFGIDLTPIAGKGVHAWVREQREKGMSPEDSLGLLKLDWRMLPPSMFQGSTEEKWNVVEEILMQIKSQRSPRHKLEDVNTIDDAVNLIRRAKKILILSGAGVSVSCGIPDFRSRNGVYARLSVDYPSLPDPQAMFDIGFFREDPRPFFKFAKEIFPGTFHPSPSHVFIRLIESNDKLLRNYTQNIDTLEQVAGIQRVIQCHGSFATASCTVCKHQVDGMAIKAEVFEQVVPMCRQCNAKGVMKPDIVFFGESLPRDFHQAVCDDADHVDLLIVMGSSLKVQPVACIPNIIPPTVPQILINRESLDHMEFDIELLGNSDQIVRELCARLGDGWDVDAAMSSISAGRETYSAPAPVAEGEFASDVLHDNDLAPLADAPGVEVVTGRTARILHVPPSCYVFEGAEIGVHRHHPKEGWSSSSGSENDSAEDDDGNDGASGADAGYSDVDEGVAAPGASESAADVASRDVDNCIPNGDS* # ORIGINAL: g3424.t1 original gene structure, not modified by PASA NODE_1818_length_9087_cov_38.6093 AUGUSTUS gene 6114 8578 . + . ID=g3424;Name=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS mRNA 6114 8578 . + . ID=g3424.t1;Parent=g3424;Name=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 6114 6154 . + . ID=g3424.t1.exon1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 6114 6154 . + 0 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 6390 6522 . + . ID=g3424.t1.exon2;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 6390 6522 . + 1 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 6667 6816 . + . ID=g3424.t1.exon3;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 6667 6816 . + 0 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 7078 7237 . + . ID=g3424.t1.exon4;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 7078 7237 . + 0 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 7596 7798 . + . ID=g3424.t1.exon5;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 7596 7798 . + 2 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 8147 8268 . + . ID=g3424.t1.exon6;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 8147 8268 . + 0 ID=cds.g3424.t1;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS exon 8449 8578 . + . ID=g3424.t1.exon7;Parent=g3424.t1 NODE_1818_length_9087_cov_38.6093 AUGUSTUS CDS 8449 8578 . + 1 ID=cds.g3424.t1;Parent=g3424.t1 #PROT g3424.t1 g3424 MKELFRETNALQKISEIQFGLLSPQEITGVSHLQIVNRELYKQPERTPYPLGVLDRRLGTSDKNATCDTCGHKMADCIGHYGHIELELPVFHIGYFKAVITILQNICKTCSRVLLTEDDRRLFLKRMRNPNIEQLQRKAISKKLNEKARRMPTCPYCGSFNGPVKKVGVLKIIHEKFKHKAGDVASDEFRRRFDDAIDFNREIRTFLGRAQQDINPLRCLVLFENVSAEDCELLDLDPIKGRPERLIQTHILVPPVCIRPSVAMDAASGSNEDDITMKLTEIVFINSVIRKHMSSGANVQQIMVRLAMPCPS* # ORIGINAL: g12069.t1 original gene structure, not modified by PASA NODE_1148_length_13536_cov_59.7506 AUGUSTUS gene 7917 9550 . - . ID=g12069;Name=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS mRNA 7917 9550 . - . ID=g12069.t1;Parent=g12069;Name=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS exon 9336 9550 . - . ID=g12069.t1.exon1;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS CDS 9336 9550 . - 0 ID=cds.g12069.t1;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS exon 9094 9209 . - . ID=g12069.t1.exon2;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS CDS 9094 9209 . - 1 ID=cds.g12069.t1;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS exon 8332 8489 . - . ID=g12069.t1.exon3;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS CDS 8332 8489 . - 2 ID=cds.g12069.t1;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS exon 7917 8000 . - . ID=g12069.t1.exon4;Parent=g12069.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS CDS 7917 8000 . - 0 ID=cds.g12069.t1;Parent=g12069.t1 #PROT g12069.t1 g12069 MPSLSFPLLNRHLGVQGSNPVSDIWALHALRIVAKYMYRAVNDPSDIEARSQMLLASTIAGIGFGNAGVHLCHGMSYPISGLNRSFKVADYSHDKPIIPHGLSVVLTAPSGADITNARSEDAGAILADQLTKFVHGLKVPNGLRAVGFTPSDIPSLVKGTLPQHRVTKLAPSPVGESELALLFEKAMTIY* # ORIGINAL: g12070.t1 original gene structure, not modified by PASA NODE_1148_length_13536_cov_59.7506 AUGUSTUS gene 11238 12803 . + . ID=g12070;Name=g12070.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS mRNA 11238 12803 . + . ID=g12070.t1;Parent=g12070;Name=g12070.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS exon 11238 12803 . + . ID=g12070.t1.exon1;Parent=g12070.t1 NODE_1148_length_13536_cov_59.7506 AUGUSTUS CDS 11238 12803 . + 0 ID=cds.g12070.t1;Parent=g12070.t1 #PROT g12070.t1 g12070 METKSDALLPALTTINVGVGPAHSRIIAAQPWGLGLCCGVRRRGAPAKPALIVLFGIVVGALLAAPVAVLLTRTYWPRWALMSEARVVPPPMTDGDVIRLANWQGNDTIVVITWTTVFKEPGYVAEVGPHEAVRCPARCLIENRRQLLPYAKGVLFHARDMHLDDLPPRDVNGIQPWTLLTMEAPSNDGWPYWNSDYLRLFDYSITYRRDSDFPVTYTPRDLEATVRLPLRTPLEHKERESPVVWVQSNCDTGNHRELYIRELMQHIPVHSYGLCLHNQPWPKVEATAVNKGRDVDMIDLLSRYRFAIEAENTDCADYITEKYFNALNATVVPIVSGPRAKYAPVMPIPDAAIFMDEHTPAELAALLRRLTHDDAAYLSLLRYREGVAHNGAEPAALEPAFLHNAEAAAQRLDQFCALCIRLHHDQEQERIHLALTGGALGGVPSDGRNLDLSLSFSPIRGQTVRADRSCVLHNLHRDGVESEGVLQDIVAGIPFVARIALPALAAWVVLWVGRRVVRRLY* # PASA_UPDATE: g12068.t1, single gene model update, valid-1, status:[pasa:asmbl_557,status:12], valid-1 NODE_1148_length_13536_cov_59.7506 . gene 2559 6538 . + . ID=g12068;Name=g12068.t1 NODE_1148_length_13536_cov_59.7506 . mRNA 2559 6538 . + . ID=g12068.t1;Parent=g12068;Name=g12068.t1 NODE_1148_length_13536_cov_59.7506 . five_prime_UTR 2559 3417 . + . ID=g12068.t1.utr5p1;Parent=g12068.t1 NODE_1148_length_13536_cov_59.7506 . exon 2559 4272 . + . ID=g12068.t1.exon1;Parent=g12068.t1 NODE_1148_length_13536_cov_59.7506 . CDS 3418 4272 . + 0 ID=cds.g12068.t1;Parent=g12068.t1 NODE_1148_length_13536_cov_59.7506 . exon 4517 6538 . + . ID=g12068.t1.exon2;Parent=g12068.t1 NODE_1148_length_13536_cov_59.7506 . CDS 4517 6538 . + 0 ID=cds.g12068.t1;Parent=g12068.t1 #PROT g12068.t1 g12068 MTHPLRGGKKSAARAANTKTSPPAPTEQLQGTNNTDAGNKQQHQLHHQQQQQPQQQQSRQQHQQRTLLDRPSLLRPDGHAQLESAVSEDRGHDFLSGSFEYQRNDFGVDYSAPFARELYGAYGGDQGLVHVAGHGKSVTLPVGDVHDEGLFYGAPDHPGGMYGQPMYHPPTVQQQQQNQHQQQQQQTLTEWAQMPALFDTQSNMGHVHGGLDASHAFHRQYTSILEARRSTGTQSAEELGNGTAETNASEAAVDADGQKKKKRKRKRRVAPNHTPRRFMDRIAQQVMRQQMIDNIFQVAEEPQLDESNALPLRFDQSGHVAGGDSGVTGLANQPGQMHTLSPSLVSPSSISPRLASGSPRLGGAPVDVHTRSTFELSMGMHADEVQLQALSRDLPATLPWQEQQRGMQPQHQQHHQQQQQLQHQLQQHQLQQQLLQQHQQQQQQQQQQQQQQQQQQQQQLQTGPQQTTASWRGRAPQRLAIPSRQRSSSVDQGAIDFLSVHAAQSASAPVTPRDGSGARGPGGLVRRDSNGASASPRMRSRLQSAGSLNETWTSSGYLTGSESRSTSSNSLSPAYYASFENVSLGSVSSSLGGIAASYSPRIVAPPLQQLHQQQHQHPQQLQQQAQQQHMPMGALDGGDGGRGQWDNLPRGSSLPTYAVQDYYAPPVSAVAPARGSLVRRIPSIELPSNDGMSSTITPIGTAAGGHAPATTALSSHGQFSPRRTYAVSVMKNAGGRTLPHQSRSLPDALTGYVPLESPRTQVANDFGLMSILQDRPEPEQPRDPELTNWQAAMGGRSPQQQRVRGLSAPAAPAPALGTPPLNQRRQPQLQRVTSSAVNTGAKSAGNSPVEYQSPRMQTPLQAQQQQQQQQQQQQQHQSQQQQNADICEQLHNLQQEALALSNSPHSNMSPREGHGGGRARPPLERGVAECFDIMAVLGEGEAAAGDESLVQWLDPHSQ* # ORIGINAL: g4839.t1 original gene structure, not modified by PASA NODE_1539_length_10615_cov_40.5769 AUGUSTUS gene 4902 6407 . - . ID=g4839;Name=g4839.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS mRNA 4902 6407 . - . ID=g4839.t1;Parent=g4839;Name=g4839.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS exon 4902 6407 . - . ID=g4839.t1.exon1;Parent=g4839.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS CDS 4902 6407 . - 0 ID=cds.g4839.t1;Parent=g4839.t1 #PROT g4839.t1 g4839 MAKYIIAELEYYASIKDGPMQVSGIDGTWQADGLVPEALKNELLANVTVLEDVPKDLQDWHPGSDKQVLDLVHPSLYPYVRGVSRKTTVDANPPLAWIGAGAPEPVGTRRTVDTNKRYDPDYGDYYTRSDTYQWLPSEFDIGLDGKVKIASYINNLHPYYHKDLYGTLGRVFERFVPMFNKVLTDMINPRERRLHADAYAWYDKGADSDVYSDEDKPDKNKKTNQDDDGISGDGGSEEDEEDGDGDEDDDEDYDENRIPKEPSVPEFERPPAPAEVVDLRGRRVQVIVKLANIVLTPEKPDYSGGVWHVEGMENENIVASGIYYYKSENISESRLAFRTEVNEPNYEQGDARGVSAIYGLEGDDSPLNQVLGSLLTMEDRCIAFPNTLQHRVEPFSLIDRTKSGVRKILVFFLVDPTERILSTLNVPCQQRDWIVNPIRLTGGLIRDLPMEIFEKIMSYVDWPMSQEEALKHRALLMKERKYFVKMHTTEIYERAFSLCEH* # PASA_UPDATE: g4838.t1, single gene model update, valid-1, status:[pasa:asmbl_1909,status:12],[pasa:asmbl_1910,status:12], valid-1 NODE_1539_length_10615_cov_40.5769 . gene 308 4405 . - . ID=g4838;Name=g4838.t1 NODE_1539_length_10615_cov_40.5769 . mRNA 308 4405 . - . ID=g4838.t1;Parent=g4838;Name=g4838.t1 NODE_1539_length_10615_cov_40.5769 . five_prime_UTR 4040 4405 . - . ID=g4838.t1.utr5p1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 3889 4405 . - . ID=g4838.t1.exon1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 3889 4039 . - 0 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 2956 3178 . - . ID=g4838.t1.exon2;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 2956 3178 . - 2 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 2377 2473 . - . ID=g4838.t1.exon3;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 2377 2473 . - 1 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 1954 2043 . - . ID=g4838.t1.exon4;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 1954 2043 . - 0 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 1697 1726 . - . ID=g4838.t1.exon5;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 1697 1726 . - 0 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 1209 1304 . - . ID=g4838.t1.exon6;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 1209 1304 . - 0 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 893 963 . - . ID=g4838.t1.exon7;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 893 963 . - 0 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 666 728 . - . ID=g4838.t1.exon8;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 666 728 . - 1 ID=cds.g4838.t1;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . exon 308 407 . - . ID=g4838.t1.exon9;Parent=g4838.t1 NODE_1539_length_10615_cov_40.5769 . CDS 308 407 . - 1 ID=cds.g4838.t1;Parent=g4838.t1;3_prime_partial=true #PROT g4838.t1 g4838 MGNLFSGCTKGADADVVPEKDIALGAPRISVANAVDKEEDERVQHISDREGGGGQQDTLFTSVMPDNNRVASMRRFSSERKPSRRESVRSMHSGADGMVTKSNSCSTLFVDSTVSQPDMDETLRCVASAIYFFVRAGHKETDPLLDPIFDEKTHPLSKSISAEEYGRMLANEEPIYNFVKLVFTSAALTGECAIISLVYIERLIASTGMTIHSTNWKRIMLGSILLASKVWDDQAVWNVDFVSILPDVQVADLNQLEKSFLEKIYFNVSVPASVYTKYYLDLRGLAEDSKRNFTMKPLDTSKAQKLE # ORIGINAL: g4840.t1 original gene structure, not modified by PASA NODE_1539_length_10615_cov_40.5769 AUGUSTUS gene 8270 9206 . + . ID=g4840;Name=g4840.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS mRNA 8270 9206 . + . ID=g4840.t1;Parent=g4840;Name=g4840.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS exon 8270 8988 . + . ID=g4840.t1.exon1;Parent=g4840.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS CDS 8270 8988 . + 0 ID=cds.g4840.t1;Parent=g4840.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS exon 9164 9206 . + . ID=g4840.t1.exon2;Parent=g4840.t1 NODE_1539_length_10615_cov_40.5769 AUGUSTUS CDS 9164 9206 . + 1 ID=cds.g4840.t1;Parent=g4840.t1 #PROT g4840.t1 g4840 MAIAMNSPCESIATAARSVQRVQILSSARVYIDKTNTDIPAATFVVPLKVDSDESLRLAEGLLASDCTVEIALTYRPRAHPRSAGGGDAALAADAVVTGSAYVGPALKALINTDKMPAFEAHMTMEDFANYALASVIGSVESAREALENRRMYVASFLSVFGSAVLEFDSTKCMMASALIDPGVGQLPFILHVTLPRDFPGTMPSIAAISIAIDDQQRKILERVPYSPRWKCDEMVEKLKFYLIEEAKKPQKR* # ORIGINAL: g3067.t1 original gene structure, not modified by PASA NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS gene 411 806 . + . ID=g3067;Name=g3067.t1 NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS mRNA 411 806 . + . ID=g3067.t1;Parent=g3067;Name=g3067.t1 NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS exon 411 507 . + . ID=g3067.t1.exon1;Parent=g3067.t1 NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS CDS 411 507 . + 0 ID=cds.g3067.t1;Parent=g3067.t1 NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS exon 660 806 . + . ID=g3067.t1.exon2;Parent=g3067.t1 NODE_5261_length_942_cov_37.9181_potentialcontaminant AUGUSTUS CDS 660 806 . + 2 ID=cds.g3067.t1;Parent=g3067.t1 #PROT g3067.t1 g3067 MLADWKSKNAVLDTIAAFVNTWTPDAVLSVAISCLTIFVSVDAASAVALVKLMLHAHTRFAVAHIIKTQEDKQAPVPAYKS # ORIGINAL: g11348.t1 original gene structure, not modified by PASA NODE_2031_length_8010_cov_39.8364 AUGUSTUS gene 644 1085 . - . ID=g11348;Name=g11348.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS mRNA 644 1085 . - . ID=g11348.t1;Parent=g11348;Name=g11348.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 983 1085 . - . ID=g11348.t1.exon1;Parent=g11348.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 983 1085 . - 0 ID=cds.g11348.t1;Parent=g11348.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 644 819 . - . ID=g11348.t1.exon2;Parent=g11348.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 644 819 . - 2 ID=cds.g11348.t1;Parent=g11348.t1 #PROT g11348.t1 g11348 MVSFDPIDSSWESIVGCVLIFLSAVAATTAGVGGGALYTPIFVLLFGLGHESIPLAKAGVFGAAVAMFICNMFQKHPSGVGPLIAYDVALML* # ORIGINAL: g11347.t1 original gene structure, not modified by PASA NODE_2031_length_8010_cov_39.8364 AUGUSTUS gene 225 571 . - . ID=g11347;Name=g11347.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS mRNA 225 571 . - . ID=g11347.t1;Parent=g11347;Name=g11347.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 225 571 . - . ID=g11347.t1.exon1;Parent=g11347.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 225 571 . - 0 ID=cds.g11347.t1;Parent=g11347.t1 #PROT g11347.t1 g11347 MLVVLLFIIGFKTMKKAIIAYRTEKKLPSMRANEEDPYERAPLLGRRAGVSSMANAVRVLPTTTARSGMAPSSIVPATGATYSQFPVWSILGLLFCWAYVLFVSMWLGGRTGDDI # PASA_UPDATE: g11349.t1, single gene model update, valid-1, status:[pasa:asmbl_3315,status:3], valid-1 NODE_2031_length_8010_cov_39.8364 . gene 2386 4087 . - . ID=g11349;Name=g11349.t1 NODE_2031_length_8010_cov_39.8364 . mRNA 2386 4087 . - . ID=g11349.t1;Parent=g11349;Name=g11349.t1 NODE_2031_length_8010_cov_39.8364 . five_prime_UTR 3849 4087 . - . ID=g11349.t1.utr5p1;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . exon 3360 4087 . - . ID=g11349.t1.exon1;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . CDS 3360 3848 . - 0 ID=cds.g11349.t1;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . exon 3121 3223 . - . ID=g11349.t1.exon2;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . CDS 3121 3223 . - 0 ID=cds.g11349.t1;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . exon 2386 3002 . - . ID=g11349.t1.exon3;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . CDS 2617 3002 . - 2 ID=cds.g11349.t1;Parent=g11349.t1 NODE_2031_length_8010_cov_39.8364 . three_prime_UTR 2386 2616 . - . ID=g11349.t1.utr3p1;Parent=g11349.t1 #PROT g11349.t1 g11349 MDKYEVVRLLQTGSSAAVYLAVNRDTNTHVAVKIMDKQKRPADLIYNETWASRRLTHPNVVNLIETIDTVKYYVIVQEYLPGGDLFDAIVPDKGMPAHEAVEYFVQVVDGLRYMHEQNVAHRDIKPENVVRDSTKKVAKLIDFGFSCPANRGASSNCGTLPYLPPEAIGSQMYNNGFGRDPKAIDVWSAGILFFTLLTGTFPWAQATTTNTEFVRFTRNDYTHAPWNSFSSTLIDLLQRMLHLDPRKRMSMAVVHAFIVKHTADGCTWVYAAGAAHQESETQVVPAVVDSEKTQIAANETASNDAYQYGKHLVDARVHTAAVGSY* # ORIGINAL: g11350.t1 original gene structure, not modified by PASA NODE_2031_length_8010_cov_39.8364 AUGUSTUS gene 6032 7903 . - . ID=g11350;Name=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS mRNA 6032 7903 . - . ID=g11350.t1;Parent=g11350;Name=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 7810 7903 . - . ID=g11350.t1.exon1;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 7810 7903 . - 0 ID=cds.g11350.t1;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 7475 7565 . - . ID=g11350.t1.exon2;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 7475 7565 . - 2 ID=cds.g11350.t1;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 6980 7154 . - . ID=g11350.t1.exon3;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 6980 7154 . - 1 ID=cds.g11350.t1;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 6343 6477 . - . ID=g11350.t1.exon4;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 6343 6477 . - 0 ID=cds.g11350.t1;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS exon 6032 6121 . - . ID=g11350.t1.exon5;Parent=g11350.t1 NODE_2031_length_8010_cov_39.8364 AUGUSTUS CDS 6032 6121 . - 0 ID=cds.g11350.t1;Parent=g11350.t1 #PROT g11350.t1 g11350 MDAGRLSICGEESFGTGSDHIREKDGLWAVLAWLSVVAHRKMSVEQILVEHWTKFGRNFFVRYDYEEVDSDKANQMVAHLSGFVANPATIIGKEFGIFRVSNCDDFEYKDPVDGSVSAHQGIRIFFEDGSRIIFRLSGTGSSGATIRVYIERYESEPSRLQLDAQVALQPLIAAALEISRLREFTGRDEPTVIT* # PASA_UPDATE: g1432.t1, single gene model update, valid-1, status:[pasa:asmbl_1093,status:12], valid-1 NODE_1288_length_12386_cov_23.3957 . gene 504 2220 . + . ID=g1432;Name=g1432.t1 NODE_1288_length_12386_cov_23.3957 . mRNA 504 2220 . + . ID=g1432.t1;Parent=g1432;Name=g1432.t1 NODE_1288_length_12386_cov_23.3957 . five_prime_UTR 504 522 . + . ID=g1432.t1.utr5p1;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . exon 504 947 . + . ID=g1432.t1.exon1;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . CDS 523 947 . + 0 ID=cds.g1432.t1;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . exon 1049 1968 . + . ID=g1432.t1.exon2;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . CDS 1049 1968 . + 1 ID=cds.g1432.t1;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . exon 2091 2220 . + . ID=g1432.t1.exon3;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . CDS 2091 2218 . + 2 ID=cds.g1432.t1;Parent=g1432.t1 NODE_1288_length_12386_cov_23.3957 . three_prime_UTR 2219 2220 . + . ID=g1432.t1.utr3p1;Parent=g1432.t1 #PROT g1432.t1 g1432 MNSKNSNMACCNKISLAAERGHLECLKALHDGGADVVGERYDVYPGCDPCLEVRLFFDESPLKENGWRTALHSACAFGHIDVARWLVGEAGASVDQDVASGYGFTPLFCAVTYKRHAVIRWLLDDGANPNSCVLCPRYNTEGCADEYETLGVSVHGMTPIYIACLIGDKDAVEMLLAAGADPSRGTAHYKAYNGWADSEWREPNPLSVSLWRRHLDISRLLVDSGADVCAESALPAAMGHSPEAVELLFSAGLNLDPATWDVEATTYNIDVCLYLMTRIPGFVKSTAGCEILFHSLYFIEFKHCGIAPCFVDIVDAFIVGGVGVNHVARCRWADMWCTLLSVAVHRSLFQELDFTAVSYLLGVGASPNVIINGVNLCVNALFNPVGRRSATVVSSILRLLTKSGMTLSSVREVYRNGRFMPIGSCVTPEEARILAFWGAPMEEAKLFCADGTPVPTLQHLCRRTIVAHGLVETARELLPPQLVDYVSIHL* # ORIGINAL: g3189.t1 original gene structure, not modified by PASA NODE_2357_length_6590_cov_39.8212 AUGUSTUS gene 2731 5146 . + . ID=g3189;Name=g3189.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS mRNA 2731 5146 . + . ID=g3189.t1;Parent=g3189;Name=g3189.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 2731 3771 . + . ID=g3189.t1.exon1;Parent=g3189.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 2731 3771 . + 0 ID=cds.g3189.t1;Parent=g3189.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 3923 5146 . + . ID=g3189.t1.exon2;Parent=g3189.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 3923 5146 . + 0 ID=cds.g3189.t1;Parent=g3189.t1 #PROT g3189.t1 g3189 MKPPRGNGSGGVGDGEAVALLSVHDDDGDMDEADAIRTPAAFDVDSREDSDDARCASSLSHTVSDSARVPFAPVSSSGPNTCAGDSSSRSARHDRLDADSSLITPMDGVPSSLPVNVKHKSITDDYEDLPLPPPSRFNPLARAEPCFAWFEKPALREKFGIILRVAAVLCIAAYLIAAMAHDARRASPVFCIVVVYMLYRLLHRWRPSNAFFTRIALCLCESTSRITASASRSSVAKGIALILCLVCVGLFVGLFVARDLNRVASFVGLIVFVLIAYALSVERRAVQWGTVAWGFSLQFVFAVAILRTHPGYALFRRIGDWVTDFLDSSDAGAQLVFGDNYREFYFAFKVLPTIIFFSAFISIMYNAGIVQVVVSKIASAMVVTMGTSGAESLSCAGNIFVGQTEAPLLIRPYIATMTLSELHAVMTGGFATIAGGVMATYISFGIPASHLIAASVMSAPAALAISKIMYPETKVSPTSGASMHASPSGTTETNNDMNSGQGRACSISDETELSPPEDRANNGLGARDDAVSDVEAVATARELGDAGKAATDQGSTPPQPAPSLGDSPPMGLIEAAAAGASEGITLVANVAAMLIAFMGLLSVCNKVLAYLGSLVGISHLSFELISSYAFVPFAWLMGVPGSDCRDVAVLLGKKTFLNEFIAYVDLKVLIENAAKMTAGDVPMGSLPSISERSVIIATYALCGFSNIGSIGIQIGGIGAMAPQRRGDLAHIAVRAMVAGTLACFMTANVAGMLL* # ORIGINAL: g3190.t1 original gene structure, not modified by PASA NODE_2357_length_6590_cov_39.8212 AUGUSTUS gene 5682 6499 . + . ID=g3190;Name=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS mRNA 5682 6499 . + . ID=g3190.t1;Parent=g3190;Name=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 5682 5828 . + . ID=g3190.t1.exon1;Parent=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 5682 5828 . + 0 ID=cds.g3190.t1;Parent=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 6008 6122 . + . ID=g3190.t1.exon2;Parent=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 6008 6122 . + 0 ID=cds.g3190.t1;Parent=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 6342 6499 . + . ID=g3190.t1.exon3;Parent=g3190.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 6342 6499 . + 2 ID=cds.g3190.t1;Parent=g3190.t1 #PROT g3190.t1 g3190 MASRRVDVIRRHLAPSQPHVTASPVAGKTAGKSADDIVVCCAVRTPITKAKRGGLKDTLPDDLLAAVLAEAVKRTGLKPENIGDIVVGNVLLPGGGALVARLGQFLAGIPETVPLSTVNRQCSSGLQAFVNVAGAIRLGQ # ORIGINAL: g3188.t1 original gene structure, not modified by PASA NODE_2357_length_6590_cov_39.8212 AUGUSTUS gene 952 2112 . + . ID=g3188;Name=g3188.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS mRNA 952 2112 . + . ID=g3188.t1;Parent=g3188;Name=g3188.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS exon 952 2112 . + . ID=g3188.t1.exon1;Parent=g3188.t1 NODE_2357_length_6590_cov_39.8212 AUGUSTUS CDS 952 2112 . + 0 ID=cds.g3188.t1;Parent=g3188.t1 #PROT g3188.t1 g3188 MTPAEEESLAARWKDLPTKQELRDAILCKAPYAFDRPAYKSFGYLAANLALAIALGWAAYAIGNGPIQHFGTGVRAAFWLCYAFAQGTVCTGLWVIGHECGHGAFSASDIVNDTVGLVLHSALLVPYHAWQHSHRLHHSRTNHADDGESHVPAKRGDPRGIGSLAMREALGPDAFAAVNIAKMLLIGWPVYLITNVSGSDKNSWRRGGMWADHFRPSSPLFPKGGQMTTRVIISDLALVAAIAAVCFSFPTAGDAFRLYFLPYLVVNAWLVGYTFLQHTDIDVPHMRAPAWTWLRGAVCTIDRNYGVFDIFHHHIGSTHVLHHIFHEIPHYHAKEASKAIIPLLGRHYLRDDGSILAAMWRTCRDCAVVEASDGTARTAVTYYTPK* # PASA_UPDATE: g12512.t1, single gene model update, valid-1, status:[pasa:asmbl_4565,status:12], valid-1 NODE_2564_length_5861_cov_39.6526 . gene 2461 5704 . + . ID=g12512;Name=g12512.t1 NODE_2564_length_5861_cov_39.6526 . mRNA 2461 5704 . + . ID=g12512.t1;Parent=g12512;Name=g12512.t1 NODE_2564_length_5861_cov_39.6526 . five_prime_UTR 2461 2600 . + . ID=g12512.t1.utr5p1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 2461 2603 . + . ID=g12512.t1.exon1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 2601 2603 . + 0 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 2902 2972 . + . ID=g12512.t1.exon2;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 2902 2972 . + 0 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 3172 3325 . + . ID=g12512.t1.exon3;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 3172 3325 . + 1 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 3657 3817 . + . ID=g12512.t1.exon4;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 3657 3817 . + 0 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 4127 4186 . + . ID=g12512.t1.exon5;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 4127 4186 . + 1 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 4488 4694 . + . ID=g12512.t1.exon6;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 4488 4694 . + 1 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 4971 5184 . + . ID=g12512.t1.exon7;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 4971 5184 . + 1 ID=cds.g12512.t1;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . exon 5593 5704 . + . ID=g12512.t1.exon8;Parent=g12512.t1 NODE_2564_length_5861_cov_39.6526 . CDS 5593 5704 . + 0 ID=cds.g12512.t1;Parent=g12512.t1;3_prime_partial=true #PROT g12512.t1 g12512 MASVQDPRYAFLAEWYDGQADLMRRYQLLYFITDSTVEMIDVKSRRVFLKRCKCDTLKPEQLFVGSTVNVLARQLKILEYGDEHTKKCLDNRQERTLLIVKPKNGMEHLSDIIDSIRIEDFLICNLRSVRVSREDAREFYAPLRGRPEGDAFASVLSSGPCVAIELMGDGAINKIKALAGPEDPRDARSQAPQSLRSQFGKDLAWNAVHVSDSSVHAAREIDFFFGTASGSRSYRPNLQSTARFSDSTLCVIRPHAIGSGLAGKIIGAVVSGGFEISAIELFRLETANAEEFLEIYKGVVPEYSAMVQELTCGACIALEVRLDGSRE # ORIGINAL: g12511.t1 original gene structure, not modified by PASA NODE_2564_length_5861_cov_39.6526 AUGUSTUS gene 92 1551 . + . ID=g12511;Name=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS mRNA 92 1551 . + . ID=g12511.t1;Parent=g12511;Name=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS exon 92 333 . + . ID=g12511.t1.exon1;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS CDS 92 333 . + 1 ID=cds.g12511.t1;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS exon 593 661 . + . ID=g12511.t1.exon2;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS CDS 593 661 . + 2 ID=cds.g12511.t1;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS exon 796 858 . + . ID=g12511.t1.exon3;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS CDS 796 858 . + 2 ID=cds.g12511.t1;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS exon 1043 1173 . + . ID=g12511.t1.exon4;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS CDS 1043 1173 . + 2 ID=cds.g12511.t1;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS exon 1471 1551 . + . ID=g12511.t1.exon5;Parent=g12511.t1 NODE_2564_length_5861_cov_39.6526 AUGUSTUS CDS 1471 1551 . + 0 ID=cds.g12511.t1;Parent=g12511.t1 #PROT g12511.t1 g12511 YQSNQPLDEYGMPHHPGHGPMPSARDYPRDQQQVLYAMAAAGLLGGPQGIKMGMHSFPHNYMHPGRGFPPQGGVYPGMGMELMEGSMPAPGSPQMNAMLMQQQAVAAAQGQFGPRGVYGMVDGGVMGLQEMGMLPQGFFVGGPPGMQHMGGPMGGPMQLMPGDDGMMQGPPPPQVMGGGRRGGKPFGGPPRQSM* # ORIGINAL: g3125.t1 original gene structure, not modified by PASA NODE_7048_length_476_cov_28.0524_potentialcontaminant AUGUSTUS gene 55 368 . - . ID=g3125;Name=g3125.t1 NODE_7048_length_476_cov_28.0524_potentialcontaminant AUGUSTUS mRNA 55 368 . - . ID=g3125.t1;Parent=g3125;Name=g3125.t1 NODE_7048_length_476_cov_28.0524_potentialcontaminant AUGUSTUS exon 55 368 . - . ID=g3125.t1.exon1;Parent=g3125.t1 NODE_7048_length_476_cov_28.0524_potentialcontaminant AUGUSTUS CDS 55 368 . - 0 ID=cds.g3125.t1;Parent=g3125.t1 #PROT g3125.t1 g3125 MNEDLHRALQRCELLEQRVKKAEADERRAASSSAGPGVAEQERRLMGQYCEGVNGVLEAEMRRFRTRCDELERQLELKSSGNSLSSGVAELVKDEKLKEMQEAL # PASA_UPDATE: g5880.t1, single gene model update, valid-1, status:[pasa:asmbl_7327,status:12], valid-1 NODE_4442_length_1613_cov_28.9038 . gene 1 1602 . - . ID=g5880;Name=g5880.t1 NODE_4442_length_1613_cov_28.9038 . mRNA 1 1602 . - . ID=g5880.t1;Parent=g5880;Name=g5880.t1 NODE_4442_length_1613_cov_28.9038 . five_prime_UTR 1410 1602 . - . ID=g5880.t1.utr5p1;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . exon 1330 1602 . - . ID=g5880.t1.exon1;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . CDS 1330 1409 . - 0 ID=cds.g5880.t1;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . exon 675 990 . - . ID=g5880.t1.exon2;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . CDS 675 990 . - 1 ID=cds.g5880.t1;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . exon 1 263 . - . ID=g5880.t1.exon3;Parent=g5880.t1 NODE_4442_length_1613_cov_28.9038 . CDS 1 263 . - 0 ID=cds.g5880.t1;Parent=g5880.t1;3_prime_partial=true #PROT g5880.t1 g5880 MARSTSSDLQLPAVGCLWELCTCGDMRTQIAAERDAVATIVDLTESADTAVQLFSCLAIAFLSLSAPLRPQLDGCGALGRVDAFVSRCREALNTQDVDWGVGHFAHMRALVVSRQPVCRRLAALCICHLSAKAAYLDCMLDANLLVPMRHAATCGDVDVQRLSLRALSNLISGTSRGSEFLGSLCALSNDWAALLASGRGADVSMLVGGSEEPSVERLA # ORIGINAL: g1641.t1 original gene structure, not modified by PASA NODE_5474_length_836_cov_110.541 AUGUSTUS gene 2 836 . + . ID=g1641;Name=g1641.t1 NODE_5474_length_836_cov_110.541 AUGUSTUS mRNA 2 836 . + . ID=g1641.t1;Parent=g1641;Name=g1641.t1 NODE_5474_length_836_cov_110.541 AUGUSTUS exon 2 836 . + . ID=g1641.t1.exon1;Parent=g1641.t1 NODE_5474_length_836_cov_110.541 AUGUSTUS CDS 2 836 . + 2 ID=cds.g1641.t1;Parent=g1641.t1 #PROT g1641.t1 g1641 DYRNINPFIEIKMRTEIPHEEEFLSRLAENDVFSIMDAVKGYWQLRLSEESQLLTAFVDTSSDDFAVYVWTVLPFGITNAGDLFQDAMTRCLRGTNARAYVDDIATGSRNIVQHINDVMEVMTALRERNVFLRISKCQFFKSEVIVLGRQVSGRGVSIPTKAMQGVHDLAVPKSRDDVRSAYQALTWWARFVPNFAIIGAPISDLLKSERRFKWGPDQQASYDALKNAICAAMPVLPPDFKEPMVLTTDASRVGVGAVLYRTDGDERRVVACASAKW # ORIGINAL: g2902.t1 original gene structure, not modified by PASA NODE_6156_length_629_cov_51.9765_potentialcontaminant AUGUSTUS gene 2 629 . + . ID=g2902;Name=g2902.t1 NODE_6156_length_629_cov_51.9765_potentialcontaminant AUGUSTUS mRNA 2 629 . + . ID=g2902.t1;Parent=g2902;Name=g2902.t1 NODE_6156_length_629_cov_51.9765_potentialcontaminant AUGUSTUS exon 2 629 . + . ID=g2902.t1.exon1;Parent=g2902.t1 NODE_6156_length_629_cov_51.9765_potentialcontaminant AUGUSTUS CDS 2 629 . + 1 ID=cds.g2902.t1;Parent=g2902.t1 #PROT g2902.t1 g2902 YELRANPSLPAADIFSRLLNVGRLTITDNGILASITTPFPADVLLRGPIVISAPQLTTFRLFDLVTVLPVDVDLTAPVLPSIETFAAMTDAQALVIRSCAAITTLQGLRSLTYVRSLAVIGCISLNFNAASVDLSSLQEVTGSLVFDGNSAMTSTPPLPVLTRLWGSLRLNNLQLLTTVLPAPKLTYIGENVELTNPDVHSPSTLNTTT # ORIGINAL: g4753.t1 original gene structure, not modified by PASA NODE_336_length_26597_cov_39.5292 AUGUSTUS gene 5593 7450 . + . ID=g4753;Name=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS mRNA 5593 7450 . + . ID=g4753.t1;Parent=g4753;Name=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 5593 5719 . + . ID=g4753.t1.exon1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 5593 5719 . + 0 ID=cds.g4753.t1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 5880 5968 . + . ID=g4753.t1.exon2;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 5880 5968 . + 2 ID=cds.g4753.t1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 6242 6349 . + . ID=g4753.t1.exon3;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 6242 6349 . + 0 ID=cds.g4753.t1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 6654 6693 . + . ID=g4753.t1.exon4;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 6654 6693 . + 0 ID=cds.g4753.t1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 6817 7120 . + . ID=g4753.t1.exon5;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 6817 7120 . + 2 ID=cds.g4753.t1;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 7309 7450 . + . ID=g4753.t1.exon6;Parent=g4753.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 7309 7450 . + 1 ID=cds.g4753.t1;Parent=g4753.t1 #PROT g4753.t1 g4753 MHVRQCVVRSYLQWLQDSDYDPDCGLCHKSLDEGEVVRLVCYDVFHWACLDKYAQSFPAHTAPAGFTCPTCRFAIIPKENLASPIADLLRKQLSSTEWAQTGLGRRSFTQTPESSRLSIDAATTPRSRGYDDEHIESVHSHGISADSSRAADGMSGDASASASVASSPVGTSGGVSLSSGGGAYRHVDAMAAQRDWVTVVDDPDDDKYKPRGGALDAVMACFSLSRGKASKRSFVRKVLLMIVAAIGLVVVWAIANRALLTSMPLPKSG* # PASA_UPDATE: g4755.t1, single gene model update, valid-1, status:[pasa:asmbl_5945,status:3], valid-1 NODE_336_length_26597_cov_39.5292 . gene 12873 16161 . + . ID=g4755;Name=g4755.t1 NODE_336_length_26597_cov_39.5292 . mRNA 12873 16161 . + . ID=g4755.t1;Parent=g4755;Name=g4755.t1 NODE_336_length_26597_cov_39.5292 . five_prime_UTR 12873 13129 . + . ID=g4755.t1.utr5p1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 12873 13370 . + . ID=g4755.t1.exon1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 13130 13370 . + 0 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 13571 13787 . + . ID=g4755.t1.exon2;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 13571 13787 . + 2 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 14200 14309 . + . ID=g4755.t1.exon3;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 14200 14309 . + 1 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 14728 14825 . + . ID=g4755.t1.exon4;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 14728 14825 . + 2 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 15097 15240 . + . ID=g4755.t1.exon5;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 15097 15240 . + 0 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . exon 15613 16161 . + . ID=g4755.t1.exon6;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . CDS 15613 15744 . + 0 ID=cds.g4755.t1;Parent=g4755.t1 NODE_336_length_26597_cov_39.5292 . three_prime_UTR 15745 16161 . + . ID=g4755.t1.utr3p1;Parent=g4755.t1 #PROT g4755.t1 g4755 MAPQSCRFYEARFPEVDDVVMVNVRSIAEMGAYVKLLEYNSIDGMILLSELSRRRIRSINKLIRVGRDECVVVLRVDKEKGYIDLSKRRVSTEEVRKADEKFNKAKAVNSILRHVADTLKIDLEELYTKTAWPLDKKHGGPGSSYEAFKEAVKDPNGVFGGLEIDEKVKEVLISNIRRRLTPQPTKIRADIEVSCYGYEGIDAIKESLRAGLACSKEDMAIKINLISPPLYVMTTTSLDKDKGIEALNEAITAIKEKISGSSGNINVKIAPRAVTETDDKELKTMLEELERQQEERPGDEDEEEEEEGAEENE* # ORIGINAL: g4758.t1 original gene structure, not modified by PASA NODE_336_length_26597_cov_39.5292 AUGUSTUS gene 25862 26107 . + . ID=g4758;Name=g4758.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS mRNA 25862 26107 . + . ID=g4758.t1;Parent=g4758;Name=g4758.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 25862 26107 . + . ID=g4758.t1.exon1;Parent=g4758.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 25862 26107 . + 0 ID=cds.g4758.t1;Parent=g4758.t1 #PROT g4758.t1 g4758 MGNAAAKAARSARAGTQPSQFAAKDVTSSASEADAVRLAHAQRLKDAEAAAAAVNAPKDTSLVAAMNKLQITTAANPLTMV* # ORIGINAL: g4757.t1 original gene structure, not modified by PASA NODE_336_length_26597_cov_39.5292 AUGUSTUS gene 21203 24980 . + . ID=g4757;Name=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS mRNA 21203 24980 . + . ID=g4757.t1;Parent=g4757;Name=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 21203 21280 . + . ID=g4757.t1.exon1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 21203 21280 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 21663 21881 . + . ID=g4757.t1.exon2;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 21663 21881 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 22206 22417 . + . ID=g4757.t1.exon3;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 22206 22417 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 22658 22736 . + . ID=g4757.t1.exon4;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 22658 22736 . + 1 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 22949 23122 . + . ID=g4757.t1.exon5;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 22949 23122 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 23390 23545 . + . ID=g4757.t1.exon6;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 23390 23545 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 23774 23983 . + . ID=g4757.t1.exon7;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 23774 23983 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 24248 24446 . + . ID=g4757.t1.exon8;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 24248 24446 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 24612 24688 . + . ID=g4757.t1.exon9;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 24612 24688 . + 2 ID=cds.g4757.t1;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 24939 24980 . + . ID=g4757.t1.exon10;Parent=g4757.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 24939 24980 . + 0 ID=cds.g4757.t1;Parent=g4757.t1 #PROT g4757.t1 g4757 MSASNSLSGSFKGVNSTIAEEGHEEEEQKKDTIFSKLKRRLSFSSRSRPNSAGSSSVRSSSYGANGPTNGAVPPSAPGAGQGVEGGDAVNQLPDINLQKFNENRMARRMSLPTALPSFNDRASLGSGSSLNGPRRSISAMTQPFGKVESYKKLEKLGEGTYATVFRGISCITGDVVALKEIKLEAEEGYPCTALREVTLLKELKQANIVTLHDIIPTENSLTLVFEYVPKDLKQFMDDYGGFMDLYNVKLFCFQLLRGLAFCHKHRVLHRDLKPQNLLIHKRGELKLCDFGLARAKGVPIKTFTNEVVTLWYRPPDVLLGSTEYTASIDMWSAGCIFAEMVAGKPLFPGSTNEDQLHTIFKILGTPTEASCPGLAKLPEFSDKFPVYASKPLSAYVPRLDADGLNLLDQMLQYEPSRRISAADALKHKYFAELGEDVLTLTDSKSIFTLPHIVLRGQVSRRRSLPVNRYQPAARGAYRMEV* # ORIGINAL: g4754.t1 original gene structure, not modified by PASA NODE_336_length_26597_cov_39.5292 AUGUSTUS gene 8207 12160 . - . ID=g4754;Name=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS mRNA 8207 12160 . - . ID=g4754.t1;Parent=g4754;Name=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 11794 12160 . - . ID=g4754.t1.exon1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 11794 12160 . - 0 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 11188 11423 . - . ID=g4754.t1.exon2;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 11188 11423 . - 2 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 10829 10901 . - . ID=g4754.t1.exon3;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 10829 10901 . - 0 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 10350 10528 . - . ID=g4754.t1.exon4;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 10350 10528 . - 2 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 10014 10164 . - . ID=g4754.t1.exon5;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 10014 10164 . - 0 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 9309 9737 . - . ID=g4754.t1.exon6;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 9309 9737 . - 2 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 8888 9147 . - . ID=g4754.t1.exon7;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 8888 9147 . - 2 ID=cds.g4754.t1;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 8207 8569 . - . ID=g4754.t1.exon8;Parent=g4754.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 8207 8569 . - 0 ID=cds.g4754.t1;Parent=g4754.t1 #PROT g4754.t1 g4754 MDERTPLLTGRGSVTSSRDSQLDDVAKDTSHLPQGRNVAFVPAENVFLQNDHPITLNVQDLRYTVVVDDGRPPIVRAMRKLASRTCQKGGEYEQLAPETKEIVRGVTFEAKPGHVLAILGSSGSGKTSLLDVLACRQSGGTVTGHVTFNGVPVTKSLVREYGAYVMQDDRLLPHLTVRETLTYVALLRLPKHLPRDQKIRRAEIVIAELGLRHVGDSIIGGGHVRGISGGERRRVSIGVQLLLSPSVIFLDEPTSGLDAFTAANIVETLASLAKSGRTVVFTIHQPRSDIYALFDSVLLLAQGKTVFFGPAKRMIQYFGSAGYECPKFTNPCDYYLDVCTVDRRTIDSQSDAEVRITSLIDAYDKNGPSFLASSALASTDGTASTTTPAYAPLQARTSDSIGAGEQFVILYQRASRNLVQGWQKLLSEFAITCMMAILIGGIYWGLTMDQLGWRDRFGLFFIMCALFPFMIILDTIAKFDSERPSFYSERQDGLYDVLPYYAAKIFSELPVTVVSSLVYSVPIYWLAGLKDSTDAFLTYIGIVLLALYCSVSMAFAVATMFPNFQIACFNANVTYTIFLLAAGFIVNIDTLWPGVKWISYISYIRRSFEALCVNEFPGLQFTCDGTGGNTTAPCPVPDGQTALAVYSVSDADVGVSSAVISALIVFWHLVAFLSLKYKNQKPQSR* # ORIGINAL: g4752.t1 original gene structure, not modified by PASA NODE_336_length_26597_cov_39.5292 AUGUSTUS gene 392 4699 . - . ID=g4752;Name=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS mRNA 392 4699 . - . ID=g4752.t1;Parent=g4752;Name=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 4448 4699 . - . ID=g4752.t1.exon1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 4448 4699 . - 0 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 4080 4147 . - . ID=g4752.t1.exon2;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 4080 4147 . - 0 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 3699 3862 . - . ID=g4752.t1.exon3;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 3699 3862 . - 1 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 3119 3284 . - . ID=g4752.t1.exon4;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 3119 3284 . - 2 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 2808 2915 . - . ID=g4752.t1.exon5;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 2808 2915 . - 1 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 2444 2628 . - . ID=g4752.t1.exon6;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 2444 2628 . - 1 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 2055 2179 . - . ID=g4752.t1.exon7;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 2055 2179 . - 2 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 1563 1684 . - . ID=g4752.t1.exon8;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 1563 1684 . - 0 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 1130 1231 . - . ID=g4752.t1.exon9;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 1130 1231 . - 1 ID=cds.g4752.t1;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS exon 392 815 . - . ID=g4752.t1.exon10;Parent=g4752.t1 NODE_336_length_26597_cov_39.5292 AUGUSTUS CDS 392 815 . - 1 ID=cds.g4752.t1;Parent=g4752.t1 #PROT g4752.t1 g4752 MAILYEVEAERIEAAFATFTTTEQNDLLKRLLSQCHPLQLRLLYAMLKPLLAIDFVEFLPRELTFKIFGYLDASTLGRAALVSKTWRDVADLDYFWRPQCARRDWLKYGEYQFETQIVRSPTFWKQVFRRRYCLRLNWANGRYECNVLKGHKLTVTSMDTDGTTLVSGSRDNTLRVWDVGERKCITVIDAHSDAVLCVQMLPAIDRLVSGCADGLVRVFTMAGRLLMSLEGHSGSVDCLRCNDKVIVSGSTDKNLRLWDMSTGACIRTMTGHTDEIRAVDINPHRIVSASWDETLRVWNINTGACTATLAGHTEVVHCFQFDNRRIVSGGGDGLVKLWAMDSSNCKMTLTGHEGEVYCLQYNDSTIATGGADGTVRLWDMNTGVMIKILKEHIGLVRCLRMDDWKLVTAGDRRRIVVWDLKTGTCLNVMHRHPTLVHLMWMGDTKLISASPDAPGTLTIVDFWNTKDDSRGRYGSESRPSSAVPSARKTSTAGSAENQPAPPVSTTSVSGQASRRAPSLPGTGATGVTSSFTNVSSSVPSPAPPPTVAPTAGRSGHVTASTGTSTVSAKRA* # PASA_UPDATE: g4756.t1, single gene model update, valid-1, status:[pasa:asmbl_5947,status:3], valid-1 NODE_336_length_26597_cov_39.5292 . gene 16301 19034 . - . ID=g4756;Name=g4756.t1 NODE_336_length_26597_cov_39.5292 . mRNA 16301 19034 . - . ID=g4756.t1;Parent=g4756;Name=g4756.t1 NODE_336_length_26597_cov_39.5292 . five_prime_UTR 18938 19034 . - . ID=g4756.t1.utr5p1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 18836 19034 . - . ID=g4756.t1.exon1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 18836 18937 . - 0 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 18480 18642 . - . ID=g4756.t1.exon2;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 18480 18642 . - 0 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 18093 18317 . - . ID=g4756.t1.exon3;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 18093 18317 . - 2 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 17807 17859 . - . ID=g4756.t1.exon4;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 17807 17859 . - 2 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 17319 17437 . - . ID=g4756.t1.exon5;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 17319 17437 . - 0 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 17110 17148 . - . ID=g4756.t1.exon6;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 17110 17148 . - 1 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . exon 16301 16764 . - . ID=g4756.t1.exon7;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . CDS 16626 16764 . - 1 ID=cds.g4756.t1;Parent=g4756.t1 NODE_336_length_26597_cov_39.5292 . three_prime_UTR 16301 16625 . - . ID=g4756.t1.utr3p1;Parent=g4756.t1 #PROT g4756.t1 g4756 MASLAVQEPLLHPADVHHPPPAEHEYHDAGVLGNARRRFSATMRVNDDEQDPEHDRPTPRVSIAVFAEFVGTAVLVGSGCSAAATEGLDVLAVAFSFGLVLLGLIACLGHQSGAHMNPVVTMAMLIYRRIPPLNAALYFPAQVAGAIVGAALVKGMINPTTTSCVTSLAPGISMGQGILIEAFMTFNLVFVIFNSAVCADAYTKFAPLPIAATLVSQIVFGGKLTGASLNPARSFGPALVFNEWKDQWVYWIGPVLGALVATFVYHILRHYRRIHHNRR* # ORIGINAL: g6426.t1 original gene structure, not modified by PASA NODE_911_length_15964_cov_40.1697 AUGUSTUS gene 3344 8975 . - . ID=g6426;Name=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS mRNA 3344 8975 . - . ID=g6426.t1;Parent=g6426;Name=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 8715 8975 . - . ID=g6426.t1.exon1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 8715 8975 . - 0 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 8061 8439 . - . ID=g6426.t1.exon2;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 8061 8439 . - 0 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 7240 7706 . - . ID=g6426.t1.exon3;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 7240 7706 . - 2 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 6467 6772 . - . ID=g6426.t1.exon4;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 6467 6772 . - 0 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 5939 6210 . - . ID=g6426.t1.exon5;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 5939 6210 . - 0 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 5452 5613 . - . ID=g6426.t1.exon6;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 5452 5613 . - 1 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 3815 5095 . - . ID=g6426.t1.exon7;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 3815 5095 . - 1 ID=cds.g6426.t1;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 3344 3641 . - . ID=g6426.t1.exon8;Parent=g6426.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 3344 3641 . - 1 ID=cds.g6426.t1;Parent=g6426.t1 #PROT g6426.t1 g6426 MYVAVAAVERRIGRSCAASPFRFAVAVVLLVHLLAYPAAHAFVVRAVQPPPTNGPQYSQTSDPGSPHDDTLGSVPGSPQNCPTSNALTQLVETLCDGLDNDCDGVTDELLPVDANRCTVAGQKGACSSGYYQCVGSVRMCFASSPLPESLNGIDDDCNGVVDDVPTLKSNVQPRIALLVGNYQGALSVTSYVAVLDQWGVPYTQIKGDAAVDNALKQGLDASYTVAVIPRTVSDDWFQSRALYLQAFVQKGGTVFVFKPSGPSVLSFAGLSNSESRTDGTFLRVDTSAKGTAGILAYVDSWEEMELELVQGEYFGGVSVDLSILTPVAGTAVIANGFTGPNGETKIGALITSRALGSGRVYAFGHDMYSYFSYRKGYINAFDPSIDVLGIMLRAALVEASSGHAVFKHTVPGPEDSAMFVSHDSSWDERNLDAMTVIDGGTHNFFIQTPLNKNQWSVMAPWICEMGDCPLMVHTVRHASDFGTQGSGNCDRPIDDIIATYTGVPPDLCSEIAIPQELIRRATGQKPTTFRSPFLTLHPDQFVMLNKLGFNGDSSIAISELKTNLPIAGDKIDVLQYRFKRMPVYELPISSEDGFTDAVQGRTDLQMANINWFLFLWRYIALRNKANNAHTMVLCHGAPGYNTNDRDGEGKREATRLAFEFANANNINVHLNYASVVNWWSARERTDVTLAYQAATAKYVGTITGPAEGIAPFVMDFTDTIKSFTCAACGGLITIVGHRVVIGSVGPSATVSFQALVGPAPATSPPTYTPPAYTPPATSGGGDAYAFPASVCAASKSTVVYDAAGAYSDEQTNALGLPTDYSSGAIGGGFFTIPTSDTPGGFWSTTLAADGLWMDISMHDTLVIRAQFGTQFKVIVTGKSATGDASVASSVDLSRYVAIPSTSKAAIDVAIPLSAFVGIDFHYVRRIVFAEFSASNGRPYALALAGIAFVKCTTALPDTHPGAQCAARNVVSAFDSSRELITNTLGFSCGTDIGGDGGMLIRGGQLGLLTDSYHSHWYSLLSDKCVDANAAGYDRITLDVTAQRGTSFVIVVASADITCTSLAVQYNTSDPSGNTLPSKFAWALVDSSTSPDRQQRTVSIPLAAMNNAAALDTTRLRAVIITAMTPYKRLYVDNVALEGRCQ* # ORIGINAL: g6425.t1 original gene structure, not modified by PASA NODE_911_length_15964_cov_40.1697 AUGUSTUS gene 170 2986 . + . ID=g6425;Name=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS mRNA 170 2986 . + . ID=g6425.t1;Parent=g6425;Name=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 170 593 . + . ID=g6425.t1.exon1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 170 593 . + 0 ID=cds.g6425.t1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 864 897 . + . ID=g6425.t1.exon2;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 864 897 . + 2 ID=cds.g6425.t1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 1121 1231 . + . ID=g6425.t1.exon3;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 1121 1231 . + 1 ID=cds.g6425.t1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 1531 1616 . + . ID=g6425.t1.exon4;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 1531 1616 . + 1 ID=cds.g6425.t1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 2121 2261 . + . ID=g6425.t1.exon5;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 2121 2261 . + 2 ID=cds.g6425.t1;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 2550 2986 . + . ID=g6425.t1.exon6;Parent=g6425.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 2550 2986 . + 2 ID=cds.g6425.t1;Parent=g6425.t1 #PROT g6425.t1 g6425 MEFNDFVDKATVVCAYVSMFLAAYIVAIEFVLPSYVGMRYKKEKKSRPTTQTMRMIKAYDRFKGMVASLDSLGDGDSASTGTKEIRDKIVTIRKRKGASAKDTSPDIPKGDEGQKGKGRGKSARKGKMEEDPFAVDWHSRLVDPLDDPTDGTEDVDALRIDQSAGALFLERAQSLLPPDVFGELATAFSRYEDGSLGFDTLVAVSASLLIRVQCWDLLGWFQVLAPSGRHLIRMHRVVEITREERPSECEEMPLFTDMLPLVYVLGSPKHPPSLRHAAAVGILEQLTNCPKQVAAVQPAGENQDEMSENANDNNNNNADEDEGGAGKQSSIFDMRVPNVFLASRGLDVLMALSRTSGDFRHVTRAVLRRMMAMAIANGANGDPDAFLTHANKASEARDGRVGAQGRTDDD* # ORIGINAL: g6427.t1 original gene structure, not modified by PASA NODE_911_length_15964_cov_40.1697 AUGUSTUS gene 13529 15794 . - . ID=g6427;Name=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS mRNA 13529 15794 . - . ID=g6427.t1;Parent=g6427;Name=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 15612 15794 . - . ID=g6427.t1.exon1;Parent=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 15612 15794 . - 0 ID=cds.g6427.t1;Parent=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 13965 15174 . - . ID=g6427.t1.exon2;Parent=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 13965 15174 . - 0 ID=cds.g6427.t1;Parent=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS exon 13529 13704 . - . ID=g6427.t1.exon3;Parent=g6427.t1 NODE_911_length_15964_cov_40.1697 AUGUSTUS CDS 13529 13704 . - 2 ID=cds.g6427.t1;Parent=g6427.t1 #PROT g6427.t1 g6427 MGLLRRVVRAAGGGYALYVLFTMTSSFLLNTLDRYLLSSVSEDLEKDIGFGDGEGGGFEYQILAGPVFVVIFSVVGIPVGHWADVGNRSRILALSVAVWCVATSLTGLANRYWQLVVLRALLGIGQSGALALNTGLLADSFPSSSLSTALGVYTSGLYIGYGMSYVFGNFIGDWRVAFYAAGAPGIVLAPLIWFTVKEPRNTGALNTEGGLQVDEVSIVDDAESTASSCSDDEEYRPFHRTNKRVPPTHSPSPSPNKVAVGTPSTASVDFPAAIAPARKGYTLWEALRYFFTAKSLVILVVGGAIRNAAGYVWSLNTQQYLNGHRHISKENIGAFMAWIPPVGGSIGSALGGVISDRLGRDGHLDRRVWVLVISQLLGAPFAAGVMLLPYPYNFVALLPGYVVGEMWMGVTLAIVVALVPEPMRATAVSIYAFVINNVGGNANVLVPPIESASSLTVALLIIYPGFYVLSSFIFLITIFSLRQDAERICKEKSDGTSQSLLRGADVTCVDVDEAWESDRLLR* # ORIGINAL: g2896.t1 original gene structure, not modified by PASA NODE_18008_length_201_cov_37.9048_potentialcontaminant AUGUSTUS gene 14 153 . - . ID=g2896;Name=g2896.t1 NODE_18008_length_201_cov_37.9048_potentialcontaminant AUGUSTUS mRNA 14 153 . - . ID=g2896.t1;Parent=g2896;Name=g2896.t1 NODE_18008_length_201_cov_37.9048_potentialcontaminant AUGUSTUS exon 14 153 . - . ID=g2896.t1.exon1;Parent=g2896.t1 NODE_18008_length_201_cov_37.9048_potentialcontaminant AUGUSTUS CDS 14 153 . - 0 ID=cds.g2896.t1;Parent=g2896.t1 #PROT g2896.t1 g2896 MDDVSQVDWARVNGASGAERSAALDAVEKEIMPRVTVEEWKEGASA # PASA_UPDATE: g9893.t1, single gene model update, valid-1, status:[pasa:asmbl_8829,status:12],[pasa:asmbl_8830,status:12],[pasa:asmbl_8831,status:12], valid-1 NODE_678_length_19183_cov_42.2393 . gene 13934 18564 . + . ID=g9893;Name=g9893.t1 NODE_678_length_19183_cov_42.2393 . mRNA 13934 18564 . + . ID=g9893.t1;Parent=g9893;Name=g9893.t1 NODE_678_length_19183_cov_42.2393 . five_prime_UTR 13934 14084 . + . ID=g9893.t1.utr5p1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . exon 13934 15250 . + . ID=g9893.t1.exon1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . CDS 14085 15250 . + 0 ID=cds.g9893.t1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . exon 15480 15693 . + . ID=g9893.t1.exon2;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . CDS 15480 15693 . + 1 ID=cds.g9893.t1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . exon 15847 16003 . + . ID=g9893.t1.exon3;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . CDS 15847 16003 . + 0 ID=cds.g9893.t1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . exon 16140 18564 . + . ID=g9893.t1.exon4;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . CDS 16140 18523 . + 2 ID=cds.g9893.t1;Parent=g9893.t1 NODE_678_length_19183_cov_42.2393 . three_prime_UTR 18524 18564 . + . ID=g9893.t1.utr3p1;Parent=g9893.t1 #PROT g9893.t1 g9893 MHTSSRMGVDGAGGAETPAPRHRGDAGKMLATKDDSGRIHVYTRIRPLNERELATTLPRAYALSDDQRMVVMESGTPREKTFRYDGVFGEASSDREVYDVVGRPIVKEILRGFNGTVMAYGQTGAGKTHTISGPKGIIPRVIRQIFGRVSRDHSSEYRVTLSFLQIYQERIQDLLSDASGPLEIREHPQTGVFVDNLSEFVVRSPKEVKALLKAGRARLVFAETKMNVASSRSHAVFQLCVERRIAGQKQHGHGKGVPPHFKGPDDRDDALASSSHSLENSFSASINGAANSGCGALATAGRAQPGQDPQRRRRPRSATVSRQRSVGAVGDSDGEYSDAYATGGDSDDGYDGEALSEAEDDDGEEEGLDYAAIGLPQGQDVVLRGKITLCDLAGSERVSKSQATGVQLHEAKHINRSLLELGNVIQALAGPSDAYVPFRNSKLTRLLQESLGGNCKTSLVVCVSPCMSEIGESVGTLRFGMRAMRIRQNAHVNIDVDYKSLAEELANKLRTNDMVWKAKERDYQRRIAELERALDEVGEKNRHDTGHEMGAHGHAHGSIASVDSGDDAPLRVPMRKPVVVVSKQLEKTAAAHVGGPAVRGGELVRATDARPALPLAAEPWTADRGVLYTELVTLRLLETLHESFRHSEDWPRMQTGALWDGLHDDISESAVAVMHALARDVDAPKFGALLDDPKALSEKSAHPFARVQKALRRAKARSESVLSRSLRNIAGEASKGKQGGQAMMDSVKIAIATLEATRASLAGEGDVSRDRETLRHLLVDKALYSCALLLDKAELGAQITRLKAKLKEARKGIIMPTGRVGTKDSSIGPDADDSMGELDPSYRDTSTELSNSDAEHGGHNSSPRRKKGPKREKAKASKPKRERFGLKDTGTGEGVVGGDSSIAVSQSSMSESEIEATTEATDATDDGRPGGRKREKVRHSGTVLRVLRNASAEAMKGTTTSTASQHTGDVSGTDSAVGSKENACVVTTVGGKERVREESSEQSRTRRSNERKTKRPSPGERRNDGVSSALPGAMEEPAPSSFAVAIATNSQGGVEKASVLMQTNRQPKTDAEAAAAETSECGPRYKGTAGNAVRDAYVMAKFSVPVDARTQTTRDRGCQTDGTTAAAQPSSTRLQPLASQQHKENRPLDRTPDEKLRGTPLATQPPTGSAGTPARSRDDSGRPPRPPSSVSDSAKKGSHRRSQSLAAAPLCELSQHQQPNASPKPTYATTTPVNARTATPSTAISSSPAHASPAATPSKSNFSRTVEQSMTAVHDRPEVKERHKLLRALDDSQAGTSNSSRACVVM* # PASA_UPDATE: g9892.t1, single gene model update, valid-1, status:[pasa:asmbl_8828,status:12], valid-1 NODE_678_length_19183_cov_42.2393 . gene 359 13379 . + . ID=g9892;Name=g9892.t1 NODE_678_length_19183_cov_42.2393 . mRNA 359 13379 . + . ID=g9892.t1;Parent=g9892;Name=g9892.t1 NODE_678_length_19183_cov_42.2393 . exon 359 535 . + . ID=g9892.t1.exon1;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . CDS 359 535 . + 0 ID=cds.g9892.t1;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . exon 724 2095 . + . ID=g9892.t1.exon2;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . CDS 724 2095 . + 0 ID=cds.g9892.t1;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . exon 2301 13379 . + . ID=g9892.t1.exon3;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . CDS 2301 13261 . + 2 ID=cds.g9892.t1;Parent=g9892.t1 NODE_678_length_19183_cov_42.2393 . three_prime_UTR 13262 13379 . + . ID=g9892.t1.utr3p1;Parent=g9892.t1 #PROT g9892.t1 g9892 MADTLAASPSPAVRILKVQLGRTELSVPVKSDPPSHIWDAADQIIREFHALVKAEPAEEVDESVAYGRVLSFVEAYCLDRPDHAEAHAFLKAVVASFQGTILRGNDVHAVVARRGLVDAEQRSVVRAYYSARHFLEPSHPLVMSPPPSPRGEKGGQNYARQYRPALVAAVQGGSARLAALFGGQGNESYFDELGEIYSTYPPSRPFVDAMSARLATEAASPEAASVGYYKEGLDVTRWLHNPAQVPSSEYMLSAPVSFPLIALTQLAHYWVALGALGMTPAEFSRLLSHTAGHSQGIVACLVVSSAQTAEDFFELSRKALLTLFWMAVRAQQVYPSTTLNPAIQQDSLANGEGTPTPMLSVRNVTLATVEQHVRQTNKHLPEDRHIEITLVNGPHNVVVAGHPQSLHALSVALRRLRAREGESQSRVPHSKRKLRFTTRYLPVSVPFHSRHMASVPEKVMRDVERLSLAWTHKLHVPVHSTYDGHDLRNEPNLTAEIIRLVCTAPVNWEKTIAPIDVTHMIDFGPGGMAGIGYLTHHNKEGTGVQVIAAGYIGAARPGILDKSSLFSTDATDVRYTQDWGIAFAPRLVRVRSTGVVHLDTRMSRLLGRPPIMVAGMTPSTVSDKFVAAVTNAGFHVELAGGGHYTEKALRERIAKIVAQTGPGDGITINILYLNARQWAFQFPLVQQLRREGVPIEGVCIAAGVPSPDTADEILSTLKEAGVRHVSFKPGSVDSIRQVVGIAERHPSMPIMLQWTGGRAGGHHSFEDFHQPIFETYGAIRKQGNIVLVAGSGIGDGEGSFPYITGEWSVAFGYPRMPFDGVLLGSRVMVARECATSSAVKRFLAERTPGIEDEAHWEATYDGVAGGITTVVSELGEPIHKVANRGVMLWKRLDKEIFSLPAEKQADSLARSKSWIVKALNDDYQKVYFGRRLDGCVCDLPDMTYEDVAHRIVELMFVADQRRWIDPSYRTFAFDFLARVEERFACDRAVGGNAAILQAPSSLDADPLACVVRITEAYAGATRQLLTTEDVQFFLSMCKRPGQKPVPFVPSIDADFKTYFKKDSLWQAEDIVAVVGRDVERVCILQGPVAARHSRVADEPVAEILGGIYRHYVDALRLSCYPDERAIAEVEYIGGADLPVSSPSASNRHRSSPTSFSSSPLGTVVTVVNGETQYTLGMPDAGVLPEHDEWLELLAGPQQSWLRALLTSPGVVQGKSIVANPVRRILRPRYAQRVVVRRGGQGGQAIAGLDVYDAALVEMGVPPHRRSVPATVPSVEVRGSVADGKITVVLNEMKAGSPIPLILRYEYRPATGYALIHETMGGRLEIIKSFYSRLWLDEPLTVSSAGDWTVPGSLRATHTVGRAELVDFCQAVGNRGERHVERGQGTIAAPLDYAIVAGWRAIIRALFHANLGGDLLRLVHLSNSFTVLDPSRMLQEGDVVETVGEIIAIENQSGGNGRLVEVRGVLSRVGSAGAAVGGVIANAVVSVTSQFLYRGRFDADYSHTFRRTTESPRRVVLSTPEAIAILRAKEWIAWTPEADALVVPGASLVFELCTEVRYRGPNIYASVATSGRIMAHKASKEIVQIGAVNYISGAGKESRGNPVIAYLERAGARAEEVVLFPDGGRSILPPSEAFSSTVQAPATNEHYAAASGDLNPIHVNPYFAAYADLPDTITHGMWTSASVRRFVEVYAGDNDPSRVSSYSAHFVGMVLPNDRLSIQLSHVGMRNGRKVVRVEARNQHGVSVLEGTAEVEQPRTAYVFTGQGAQEVGMGMDLYDSSEVARAVWDRAERHFRDTYGFSILRVVRTNPIEMTVHFGGATGRRIRQNYMGMTFDVCGEDGTVSSRSLFPDIRNSTLSYTFSHPQGLLSATQFTQPALVLFEKAAFEDMQAKGLVQERCVFAGHSLGEYAALAALGDVLPIESLVDVCFYRGMTMQCAVPRDSSGRSNYGMAAVNPMRAGLHALGDAGLQFVCQAIATHRRGLLEIVNHNVDGWQYVVAGELGCLDTLTGVMNAVRARGDDIARLVAAASLATVKEELGKIVATASAATDRRRDAAPGGILQLERGVATIPLPGIDVPFHSRFLLSGVGLFRQYLGRRLSPKNIDIALLTRRYIPNLTAEPFSIGREYFERVLKITDSESVANVIESWPASRPLSEFDPEEQQRLGYVLLVELLAYQFASPVRWIETQDRVFREFDIERLVEVGPQPTLTQMAIRTLKLKYEAYDEATSRRRQVLCFGKDKDQLYFERDGVDAVVPAVSDTAAAPKPAPVSVPISAAPVHAVAVGDGSSVPDVPMTAEEVVQTVIAIKTKRKIAAVPLTTSIKELSAGKSTLQNEIVGDLAKEFGTIAAERPEEMPLSQLAAAIQPRFSGKPGKQTAALVARLFSAKMPGGFSVTRAREHLRTQRHLGDGRTDGVFLFACSEEPDARLGSESDAIAWLDRVTDMYGGKQGLSIPNGSPAAPAFAGASYVPVQGANAQAIPDTPVSALEFLRTLLAVKLKRPLSAVPGSQTIKALVGGKSALQNELVGDIQLEFGAVVDSAAEMTLEQLGQSVGPSYKGLGKCSRAMISRTVSAKMPAGVALSSLRQQLSTRGLGEGRQDAVLLRAVAMEPPQRLASEAECKTWLDGVVSAYASDAGISLADGQRAGAAGAGGASHAAMSAAGAAAAAAFSGKHSELLREQIALFRAYLGEDPFEGERQLQRVGEEARALQVGADKWLAEHGEEYSAGIQAMFDSLKIRRYDSYFNWARQDVAQLYGEIVCCENRKNGDALDDALVERLVRRSRHIVNRATLSLVDMIEHRVKHAAGRSDDPREQAIARWGEWLIAEIKATLAHPPIYRSDVKPTQPVVSVGDDGRIEYSEVPREGAPTAAHYVEQMQRADATPKSGRKNGKKTSAAGRKAVHAGPADVPYLHLRSSCRTDPSRRVYDPVLTRKYFAALAQVAGPGVSFKGKTVLITGCGRGSIGADILTKLIVGGADVIVTTSSFSRKTTEYYRGLYEQFGARGSSLVVLPFNQGSKQDVDALVKFIYEGDGLATDIDVVIPFAAISENGRPLGSIDARSELAHRIMLTNVIRLLGEIRNAKESRGQTSRPALAILPLSPNHGLFGSDGLYAESKIGLETLFHKWHSEDWAPYLSIAGAVIGWTRGTGLMSSNDIVAPGIEDLGVRTFSTSEMALNIMALMHPSVVELSQEAPVWADFGGGFETVCNFNEKIATLRKDLSALSAVRAAVAKDAAVDEAVVTGGSHAELKSVERRANMRFAYPVLPTAERIESLAGERLHGMLDLDRVVVVVGYGEVGPWGSARTRWEMERNGEFSLEGCLELAWMMGYIRHHNGPLADGKPYAGWVDAATGLPVRDAEVKERYEQQILSHAGVRVVEPSMLDGFDPSRKQFLHQVAITRDLPPMETSAEQAVMFKREHGDKADVYEGRDGNWVVVLRKGATMYVPKAMRFDRFVAGQIPTGWDATRYGVPKDIAAQVDPVTLFNLVSTAEALISAGITDPYEMYKYVHVTEVGNTTGGGMGGMKSLGGIYRERYIENPIAGDTLQEVFINTMAAWVNMLLLSASGPIKTPVGACATAVESVELGVDTILSGKARIVVCGGFDDIREESMTEFASMGATSSSEAEAAHGRDPQEMSRPTTSSRSGFMEAQGAGNQVLMSASLAIEMGVPVYGIVALTSTAMDKEGRSVPAPGKGILTSARERRTAFPSPLLSLDYRRRQLESQRAQIDVWRHTEVGMLRDDAARMAHEGLIAMQDVEAYVAERTVCIQDEAVRQEKAAMAMWGNEFYVRDPTISPIRGALSVYGLNIDDIGVASFHGTSTKANDTNESHVLNRQMDHLGRSRGNPVPAVCQKYLTGHPKGPAAAWMLNGVLQCIESGVIPGNRNADNIDKALAEFEHVLYPSHSLKVPIVKAGLLKSFGFGQVGGEVLVVNPLYLYAAIGKEEYAGYARRRGARELQTYRHMHNAMTGTAGLVQVKDRPPYTPEREQHVYLDPLARATRDERTGAYAFLPSHSVKTASEIAIAGMERVHAALAQVQDAGVVPPSEGGRGVGVDIEPFESFAMDNPTFIERNFTDAECRHCSSQADPRASYAGRWCAKEAVIKAISSASRVDAKLWDGPSAGLADIEVLPSATGAPSVMLHGTAADAMRRAGIETVRVSITHAGEYAMAVAIAQ* # ORIGINAL: g9815.t1 original gene structure, not modified by PASA NODE_2686_length_5448_cov_36.7443 AUGUSTUS gene 171 2994 . - . ID=g9815;Name=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS mRNA 171 2994 . - . ID=g9815.t1;Parent=g9815;Name=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 2865 2994 . - . ID=g9815.t1.exon1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 2865 2994 . - 0 ID=cds.g9815.t1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 2176 2636 . - . ID=g9815.t1.exon2;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 2176 2636 . - 2 ID=cds.g9815.t1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 1713 1841 . - . ID=g9815.t1.exon3;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 1713 1841 . - 0 ID=cds.g9815.t1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 1253 1402 . - . ID=g9815.t1.exon4;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 1253 1402 . - 0 ID=cds.g9815.t1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 730 867 . - . ID=g9815.t1.exon5;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 730 867 . - 0 ID=cds.g9815.t1;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS exon 171 361 . - . ID=g9815.t1.exon6;Parent=g9815.t1 NODE_2686_length_5448_cov_36.7443 AUGUSTUS CDS 171 361 . - 0 ID=cds.g9815.t1;Parent=g9815.t1 #PROT g9815.t1 g9815 MKIKVLSRDNAEYMRERVSDIQRLQRNIDPALHPFEKAREYTRALNAVKLERVFAKPFVGQLEGHSDGVYCMAKDPTVLSRLLTGACDGEVRVWNLTNRKTRWSVNAHRGFVRGICVAPLGDSYITVGEDKTIKQWRMDTSDSVLSLELAELQTPLNTILGKNPFSSVDHHYKDTLFATSGSDVEVWDEHRSEPINVFNWGADTVTSVRFNPIQVSVLAAASGDRGVSLFDIRTGSSLKKVILEMRANAIAWNPMEAFNFTVGCEDHNCYTFDMRKLDTATNVHKDHVSAIMDIDYCPTGRQFVTGAYDRTLRIYDFNQGHSSEVYHTRRMQRIFSVKWSMDAKYILCGSDETNVRVWKADASEKIGTKAPRERAAAEYADALKEKFKHHPDIKRIQRH # PASA_UPDATE: g9816.t1, single gene model update, valid-1, status:[pasa:asmbl_4800,status:12], valid-1 # PASA_UPDATE: g9816.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4801,status:12], valid-1 NODE_2686_length_5448_cov_36.7443 . gene 3528 5330 . - . ID=g9816;Name=g9816.t1 NODE_2686_length_5448_cov_36.7443 . mRNA 3528 5330 . - . ID=g9816.t1;Parent=g9816;Name=g9816.t1 NODE_2686_length_5448_cov_36.7443 . five_prime_UTR 5286 5330 . - . ID=g9816.t1.utr5p1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 5232 5330 . - . ID=g9816.t1.exon1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 5232 5285 . - 0 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 4827 4983 . - . ID=g9816.t1.exon2;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 4827 4983 . - 0 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 4538 4611 . - . ID=g9816.t1.exon3;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 4538 4611 . - 2 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 4137 4229 . - . ID=g9816.t1.exon4;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 4137 4229 . - 0 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 3764 3928 . - . ID=g9816.t1.exon5;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 3764 3928 . - 0 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . exon 3528 3625 . - . ID=g9816.t1.exon6;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . CDS 3590 3625 . - 0 ID=cds.g9816.t1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . three_prime_UTR 3528 3589 . - . ID=g9816.t1.utr3p1;Parent=g9816.t1 NODE_2686_length_5448_cov_36.7443 . mRNA 3528 5330 . - . ID=g9816.t1.1.5b6be70b;Parent=g9816;Name=g9816.t1 NODE_2686_length_5448_cov_36.7443 . five_prime_UTR 5286 5330 . - . ID=g9816.t1.1.5b6be70b.utr5p1;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . exon 5232 5330 . - . ID=g9816.t1.1.5b6be70b.exon1;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . CDS 5232 5285 . - 0 ID=cds.g9816.t1.1.5b6be70b;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . exon 4827 4983 . - . ID=g9816.t1.1.5b6be70b.exon2;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . CDS 4827 4983 . - 0 ID=cds.g9816.t1.1.5b6be70b;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . exon 4538 4611 . - . ID=g9816.t1.1.5b6be70b.exon3;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . CDS 4538 4611 . - 2 ID=cds.g9816.t1.1.5b6be70b;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . exon 4137 4229 . - . ID=g9816.t1.1.5b6be70b.exon4;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . CDS 4137 4229 . - 0 ID=cds.g9816.t1.1.5b6be70b;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . exon 3528 3928 . - . ID=g9816.t1.1.5b6be70b.exon5;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . CDS 3749 3928 . - 0 ID=cds.g9816.t1.1.5b6be70b;Parent=g9816.t1.1.5b6be70b NODE_2686_length_5448_cov_36.7443 . three_prime_UTR 3528 3748 . - . ID=g9816.t1.1.5b6be70b.utr3p1;Parent=g9816.t1.1.5b6be70b #PROT g9816.t1 g9816 MQVAGLTDHDLSLYDHVPRTPDAANRPIVSHPLLEIRPRQLEAGLQGTLSGNKYIFTFVLPNGDLAQYGVETAEEAVEWHRVLTSAFSNSAKTMGSVVYSGRKGESGVTLEINYDTGLRLFDAATQSVMWQHEFGEIVASWNNSSLLRLDFAHPEYDGTQDIELKNPRAAVHALVAMLQAKVEERQTAIAAH* #PROT g9816.t1.1.5b6be70b g9816 MQVAGLTDHDLSLYDHVPRTPDAANRPIVSHPLLEIRPRQLEAGLQGTLSGNKYIFTFVLPNGDLAQYGVETAEEAVEWHRVLTSAFSNSAKTMGSVVYSGRKGESGVTLEINYDTGLRLFDAATQSVMWQHEFGEIVASWNNSSLLRLDFAHPEYDGTQDIELKNPRAAVHALVAMLQAKVCTL* # ORIGINAL: g2983.t1 original gene structure, not modified by PASA NODE_6746_length_516_cov_21.6553_potentialcontaminant AUGUSTUS gene 89 281 . + . ID=g2983;Name=g2983.t1 NODE_6746_length_516_cov_21.6553_potentialcontaminant AUGUSTUS mRNA 89 281 . + . ID=g2983.t1;Parent=g2983;Name=g2983.t1 NODE_6746_length_516_cov_21.6553_potentialcontaminant AUGUSTUS exon 89 281 . + . ID=g2983.t1.exon1;Parent=g2983.t1 NODE_6746_length_516_cov_21.6553_potentialcontaminant AUGUSTUS CDS 89 281 . + 1 ID=cds.g2983.t1;Parent=g2983.t1 #PROT g2983.t1 g2983 DLAARNCMVVAGLRVSSTLESGWKLSPKAHVTVKVADMGLSRDTGASGDYYVSKTRRKLPVKW* # PASA_UPDATE: g10357.t1, single gene model update, valid-1, status:[pasa:asmbl_5465,status:12], valid-1 NODE_303_length_27648_cov_42.6523 . gene 8369 9586 . + . ID=g10357;Name=g10357.t1 NODE_303_length_27648_cov_42.6523 . mRNA 8369 9586 . + . ID=g10357.t1;Parent=g10357;Name=g10357.t1 NODE_303_length_27648_cov_42.6523 . five_prime_UTR 8369 8444 . + . ID=g10357.t1.utr5p1;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . exon 8369 8594 . + . ID=g10357.t1.exon1;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . CDS 8445 8594 . + 0 ID=cds.g10357.t1;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . exon 8706 8833 . + . ID=g10357.t1.exon2;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . CDS 8706 8833 . + 0 ID=cds.g10357.t1;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . exon 9116 9586 . + . ID=g10357.t1.exon3;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . CDS 9116 9209 . + 1 ID=cds.g10357.t1;Parent=g10357.t1 NODE_303_length_27648_cov_42.6523 . three_prime_UTR 9210 9586 . + . ID=g10357.t1.utr3p1;Parent=g10357.t1 #PROT g10357.t1 g10357 MAASVGASLAPAANATNKEFSVSEFSFLPQILEIVDSIHESSDAAEVTRKTATLFAKFQQCQALLQSLPGIDSTGEEQKALYNAFKSELEEKRQLLEMYSKLPLFANPGGVTDSTAEMKMETS* # ORIGINAL: g10359.t1 original gene structure, not modified by PASA NODE_303_length_27648_cov_42.6523 AUGUSTUS gene 14930 15669 . + . ID=g10359;Name=g10359.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS mRNA 14930 15669 . + . ID=g10359.t1;Parent=g10359;Name=g10359.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 14930 14985 . + . ID=g10359.t1.exon1;Parent=g10359.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 14930 14985 . + 0 ID=cds.g10359.t1;Parent=g10359.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 15204 15669 . + . ID=g10359.t1.exon2;Parent=g10359.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 15204 15669 . + 1 ID=cds.g10359.t1;Parent=g10359.t1 #PROT g10359.t1 g10359 MDDPGTLHFLRRASALRARTLDKNVDSALAALSVQTDGNCTEPAVAGDTDDADTSHLGCPRAEGTKIRAAVTPLQVLADVQIDGPELPQWVDYAERKADYKVVQDSENTHKKACIDMIVSGQAMDSAIAQVPHVQPAPHVSPAAAATSNPWKASALFSRADSKAALQLKCSRY* # ORIGINAL: g10358.t1 original gene structure, not modified by PASA NODE_303_length_27648_cov_42.6523 . gene 9585 13802 . - . ID=g10358;Name=g10358.t1 NODE_303_length_27648_cov_42.6523 . mRNA 9585 13802 . - . ID=g10358.t1;Parent=g10358;Name=g10358.t1 NODE_303_length_27648_cov_42.6523 . exon 13578 13802 . - . ID=g10358.t1.exon1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . CDS 13578 13802 . - 0 ID=cds.g10358.t1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . exon 11954 13411 . - . ID=g10358.t1.exon2;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . CDS 11954 13411 . - 0 ID=cds.g10358.t1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . exon 11133 11761 . - . ID=g10358.t1.exon3;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . CDS 11133 11761 . - 0 ID=cds.g10358.t1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . exon 10904 10932 . - . ID=g10358.t1.exon4;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . CDS 10904 10932 . - 2 ID=cds.g10358.t1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . exon 9585 10076 . - . ID=g10358.t1.exon5;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . CDS 9814 10076 . - 1 ID=cds.g10358.t1;Parent=g10358.t1 NODE_303_length_27648_cov_42.6523 . three_prime_UTR 9585 9813 . - . ID=g10358.t1.utr3p1;Parent=g10358.t1 #PROT g10358.t1 g10358 MAAAFVFNEDDIAYFRTEFTFYDQGTGQLKPESFESYVHRVRVRAGIDPGMVDVVVAGFIQRGGNSTIGLSEVVKVLNDARTGKLGKGKAPSKSAGGPPLLQRRKSVKDVVKQKSTVLSRGLSKWFGVDDRGEDLKRWQTTLQSQENRVGNELVRQASKLSRQASKLSRSDSRRMSQSSLASDTGAGAGLKRKPSVRVLGESLKPKDKGDDGIELQTVKLKVADEDDSDGSYGDSDEDANQYMSAIVSRQDEQLNDGELPDLQLAGSPSVPAKKERGVRISEGTRAKRRDRGRVYEDEDWFGYDNPDLARKAGVPVRALRPVDFVDMEPEDNAGEPLSAVPSYMPTLTTIQGTPSPPRSPANPLQMKAVPASRLSASPAPPRAASPSPGRASEDVTIAVVTVPLRGGGPMNPADARAMPRAGNRRASVARRQRRAQKEGAIPSSAPKLARMNTFVRKQVASMPTFKPWFIWTMTIAQIIVMIVELAVGGISPIGFSSKTVTGSVPSFSGDMMSVSTNKTQNFWIGPDTTFIIHWGAKYTPCMRKDAKTFVDIDRQNAIDDAGGCCQMKTSQGVTRCGWQSLQTCNSLSGTFTTGASCDNITACAGKIVTRPCCVGYSGQCVEFTEEACSFYDGYYHAGASHCGDVSCLEDVCGFGGMSNPDHPDQGGRFVVPIFLHVGIFHLFFNLLMQIGIGRQIERTAGWLRTGIIYMLSGIGGNLFSAIFVPYQPQVGASGALYGLLAVLVVELFQSWQLLTHPWKEMFKLIIVVAVSLMIGTLPWVLDNFAHIGGFLTGILAGIIFLPYIVFGKWDARRKRILIGVAVPVLIALFVIGFIMFYQAQGADFCPWCKYLDCIPYTKNFCDGVNIG* # ORIGINAL: g10361.t1 original gene structure, not modified by PASA NODE_303_length_27648_cov_42.6523 AUGUSTUS gene 22057 25343 . + . ID=g10361;Name=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS mRNA 22057 25343 . + . ID=g10361.t1;Parent=g10361;Name=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 22057 22332 . + . ID=g10361.t1.exon1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 22057 22332 . + 0 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 22437 23121 . + . ID=g10361.t1.exon2;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 22437 23121 . + 0 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 23254 23468 . + . ID=g10361.t1.exon3;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 23254 23468 . + 2 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 23697 23811 . + . ID=g10361.t1.exon4;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 23697 23811 . + 0 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 23912 23960 . + . ID=g10361.t1.exon5;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 23912 23960 . + 2 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 24076 24264 . + . ID=g10361.t1.exon6;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 24076 24264 . + 1 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 24365 24404 . + . ID=g10361.t1.exon7;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 24365 24404 . + 1 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 24765 24858 . + . ID=g10361.t1.exon8;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 24765 24858 . + 0 ID=cds.g10361.t1;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 24958 25343 . + . ID=g10361.t1.exon9;Parent=g10361.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 24958 25343 . + 2 ID=cds.g10361.t1;Parent=g10361.t1 #PROT g10361.t1 g10361 MYGYGCQTPCNCENGATCHASTGACTCAFGWMGVKCDLVVPPSVPHVNATAELTQYGIGIRLRWSHDDVGPRAWNTWRYEIRRLGCFPKAYQVGDVHTFIDTDVVINQGYTYFVQPFNSRNVSSATAGQISIERLEKAELPSPPYNVSSTPTLNPDNQHSMIKFTWREDISSGPIVKTYIFRDGRLIMQGLMATEYKDRDVVFGRTYDYEIMSVNQYGNSTATRFSETASIGPTDSSTPKSGISSSNDVAGPVAGGVVGSIVGAAVIVLAILFIRKRTLRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRSGSVAVTKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPKHPNVIELLGVCTQSDPNCMVLEFAAHGDLRHFLSENKASNFTATDLLCFCIDIARGMEHLSKCEIIHRDLAARNCMVVAGPRAPNSMENGWKLSPKAQVIVKVADMGLSRDTSASDDYYVAKTRRKLPVKWMAPESLEKRIFTKASDMWSFGIVMWEVFARGAKPYPGLENHAVSTYLSQNKRMEPPKDCPELIYAAMEACWRRHAETRPQFSQIVLQLRRGMAVLCGTEGGGGGLGGGVNSDGANRTDGLSRPFGQSDTYALMVPESAYNYAETLTPEEERNVHTLQNVMFQKVTTTGDSSA* # ORIGINAL: g10360.t1 original gene structure, not modified by PASA NODE_303_length_27648_cov_42.6523 AUGUSTUS gene 18810 20385 . + . ID=g10360;Name=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS mRNA 18810 20385 . + . ID=g10360.t1;Parent=g10360;Name=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 18810 18970 . + . ID=g10360.t1.exon1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 18810 18970 . + 0 ID=cds.g10360.t1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 19070 19141 . + . ID=g10360.t1.exon2;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 19070 19141 . + 1 ID=cds.g10360.t1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 19627 19698 . + . ID=g10360.t1.exon3;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 19627 19698 . + 1 ID=cds.g10360.t1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 19799 19870 . + . ID=g10360.t1.exon4;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 19799 19870 . + 1 ID=cds.g10360.t1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 19977 20048 . + . ID=g10360.t1.exon5;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 19977 20048 . + 1 ID=cds.g10360.t1;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 20310 20385 . + . ID=g10360.t1.exon6;Parent=g10360.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 20310 20385 . + 1 ID=cds.g10360.t1;Parent=g10360.t1 #PROT g10360.t1 g10360 MGCIGGTVDFTPVPSAVTVNSMPCPIPSDSGLGSNQIATLQSGIFDKLAALNQLLLSSNQIATLPSGIFDKLTALTVLLLGSNQLATLPSGIFDKLTRLTQLRLDSNQLATLPNGMLDKLTTLTIFYLSSNQLVTLPSGIFDKLTALNQLYLSSNQIATLPSGIFDKLTALTQL* # PASA_UPDATE: g10356.t1, single gene model update, valid-1, status:[pasa:asmbl_5460,status:12], valid-1 # PASA_UPDATE: g10356.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5461,status:12],[pasa:asmbl_5466,status:12], valid-1 NODE_303_length_27648_cov_42.6523 . gene 4947 7293 . + . ID=g10356;Name=g10356.t1 NODE_303_length_27648_cov_42.6523 . mRNA 4947 7293 . + . ID=g10356.t1;Parent=g10356;Name=g10356.t1 NODE_303_length_27648_cov_42.6523 . five_prime_UTR 4947 4949 . + . ID=g10356.t1.utr5p1;Parent=g10356.t1 NODE_303_length_27648_cov_42.6523 . exon 4947 7293 . + . ID=g10356.t1.exon1;Parent=g10356.t1 NODE_303_length_27648_cov_42.6523 . CDS 4950 6794 . + 0 ID=cds.g10356.t1;Parent=g10356.t1 NODE_303_length_27648_cov_42.6523 . three_prime_UTR 6795 7293 . + . ID=g10356.t1.utr3p1;Parent=g10356.t1 NODE_303_length_27648_cov_42.6523 . mRNA 4947 7293 . + . ID=g10356.t1.1.5b6be70b;Parent=g10356;Name=g10356.t1 NODE_303_length_27648_cov_42.6523 . five_prime_UTR 4947 4949 . + . ID=g10356.t1.1.5b6be70b.utr5p1;Parent=g10356.t1.1.5b6be70b NODE_303_length_27648_cov_42.6523 . exon 4947 5508 . + . ID=g10356.t1.1.5b6be70b.exon1;Parent=g10356.t1.1.5b6be70b NODE_303_length_27648_cov_42.6523 . CDS 4950 5508 . + 0 ID=cds.g10356.t1.1.5b6be70b;Parent=g10356.t1.1.5b6be70b NODE_303_length_27648_cov_42.6523 . exon 5989 7293 . + . ID=g10356.t1.1.5b6be70b.exon2;Parent=g10356.t1.1.5b6be70b NODE_303_length_27648_cov_42.6523 . CDS 5989 6794 . + 2 ID=cds.g10356.t1.1.5b6be70b;Parent=g10356.t1.1.5b6be70b NODE_303_length_27648_cov_42.6523 . three_prime_UTR 6795 7293 . + . ID=g10356.t1.1.5b6be70b.utr3p1;Parent=g10356.t1.1.5b6be70b #PROT g10356.t1 g10356 MHQKKLIVIMASQTPVSLSSLPLEVFLAHIAPLLCNKDLASVAGVNSRLRNGLRLKRTYNLRSAFSKLFWTSGEFRNAVCADIPRERVGLDLNRVHSVREDLSALGGVRTLNLSHCYGVTDVSALNCVHLLNLSGCYRVTDVSALGGVHTLNLSGCRGMKNASALGSVHTLNLSGCKGVTDVSALGGVHTLDLSDCEGVTDVSALGGVHTLDLRGCEGVTNVSALGGIHSLYLSRCKGVTDVSGLGGVHTLDLRGCQAVTEVSALGGVHSLDLSWCDGMTDVSALGGVHTLNLSHWDVVTDVSALGSVHTLDLSWCNRVTDVSALGGVHTLHLSSCRGVKNVSALGGVHMLNLSCCKGVIDVSALGDVHTLDLRGCEGVTNVSALGGVHILDLTCCYRVMDVSALGGVHTLNLSHCDEVTDVSALGSVHTLDLSCCYKVTDVSALGGVRMLNLSDCKGLTGVSALGRVHTLNLSGCEEVTDVSALGAVHTLDLRGCEGVTNVSALGGVHILDLTCCYRVMDVSALGSVHALNLSNCEGVTDVSALGSVHTLNLSGCKGVADVSALGGVHWLNLSFCDRVTDVSALGGHSFVHGGAIGDSEFGGVYSLISPVVME* #PROT g10356.t1.1.5b6be70b g10356 MHQKKLIVIMASQTPVSLSSLPLEVFLAHIAPLLCNKDLASVAGVNSRLRNGLRLKRTYNLRSAFSKLFWTSGEFRNAVCADIPRERVGLDLNRVHSVREDLSALGGVRTLNLSHCYGVTDVSALNCVHLLNLSGCYRVTDVSALGGVHTLNLSGCRGMKNASALGSVHTLNLSGCKGVTDVSALGGVHMLNLSCCKGVIDVSALGDVHTLDLRGCEGVTNVSALGGVHILDLTCCYRVMDVSALGGVHTLNLSHCDEVTDVSALGSVHTLDLSCCYKVTDVSALGGVRMLNLSDCKGLTGVSALGRVHTLNLSGCEEVTDVSALGAVHTLDLRGCEGVTNVSALGGVHILDLTCCYRVMDVSALGSVHALNLSNCEGVTDVSALGSVHTLNLSGCKGVADVSALGGVHWLNLSFCDRVTDVSALGGHSFVHGGAIGDSEFGGVYSLISPVVME* # ORIGINAL: g10355.t1 original gene structure, not modified by PASA NODE_303_length_27648_cov_42.6523 AUGUSTUS gene 493 1621 . - . ID=g10355;Name=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS mRNA 493 1621 . - . ID=g10355.t1;Parent=g10355;Name=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 1527 1621 . - . ID=g10355.t1.exon1;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 1527 1621 . - 0 ID=cds.g10355.t1;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 1284 1374 . - . ID=g10355.t1.exon2;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 1284 1374 . - 1 ID=cds.g10355.t1;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 958 1103 . - . ID=g10355.t1.exon3;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 958 1103 . - 0 ID=cds.g10355.t1;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS exon 493 679 . - . ID=g10355.t1.exon4;Parent=g10355.t1 NODE_303_length_27648_cov_42.6523 AUGUSTUS CDS 493 679 . - 1 ID=cds.g10355.t1;Parent=g10355.t1 #PROT g10355.t1 g10355 MTRQRPNVLITGTPGTGKTTTCEMLASATGLTHINIGQIVKDKELHTGWDEEYECFVLDEDKVCDELEEQMSAGGCIVDHHTVDFFPERWFDLVVVLRTDNTLLYDRLTSRGYAEKKLTDNVECEIMQVILDEARDSYSSEIVHELQSNTVDDMEANVNRIISWIDTYKPSV* # PASA_UPDATE: g14112.t1, single gene model update, valid-1, status:[pasa:asmbl_3348,status:12], valid-1 NODE_2043_length_7961_cov_33.9011 . gene 4504 7097 . - . ID=g14112;Name=g14112.t1 NODE_2043_length_7961_cov_33.9011 . mRNA 4504 7097 . - . ID=g14112.t1;Parent=g14112;Name=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 6955 7097 . - . ID=g14112.t1.exon1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 6955 7097 . - 0 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 6667 6763 . - . ID=g14112.t1.exon2;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 6667 6763 . - 1 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 6091 6240 . - . ID=g14112.t1.exon3;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 6091 6240 . - 0 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 5710 5883 . - . ID=g14112.t1.exon4;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 5710 5883 . - 0 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 5370 5457 . - . ID=g14112.t1.exon5;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 5370 5457 . - 0 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . exon 4504 5080 . - . ID=g14112.t1.exon6;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . CDS 4893 5080 . - 2 ID=cds.g14112.t1;Parent=g14112.t1 NODE_2043_length_7961_cov_33.9011 . three_prime_UTR 4504 4892 . - . ID=g14112.t1.utr3p1;Parent=g14112.t1 #PROT g14112.t1 g14112 MVVQGIAEAHGFEQYSWALLNVLSLMTSAGYGQTIPRRTEEAWANTAFMFFGAMWYALFVSKISSVILAKSSPTRRYQERIAEVEQFLFDNGFPTEFRERAMEYLEHRYKKRRLFNEAEIFGDISDSLLKELSLYRCAHLVQAVPFLNDGDSNFVAAVVSNMEFCVYMPGDAIIEEGSVGREMFFIEKGIVEIVVNPGSTKETEVVNATLADGSFFGELALLNPGVRRAASVRAVIPCDLYRLSYAHLNTILRDYPEMRSHLADVAAARALKLEKIVEK* # ORIGINAL: g14111.t1 original gene structure, not modified by PASA NODE_2043_length_7961_cov_33.9011 AUGUSTUS gene 3300 3587 . + . ID=g14111;Name=g14111.t1 NODE_2043_length_7961_cov_33.9011 AUGUSTUS mRNA 3300 3587 . + . ID=g14111.t1;Parent=g14111;Name=g14111.t1 NODE_2043_length_7961_cov_33.9011 AUGUSTUS exon 3300 3587 . + . ID=g14111.t1.exon1;Parent=g14111.t1 NODE_2043_length_7961_cov_33.9011 AUGUSTUS CDS 3300 3587 . + 0 ID=cds.g14111.t1;Parent=g14111.t1 #PROT g14111.t1 g14111 MGSCGSKSSPAVDPSATSPEERRQSSNNLASKPSATPLEDLPKQEPRNNLAPRKSSIRRGNDYNPHFEEEKKRLSEVKDLGQESIFRTDPRLAED* # PASA_UPDATE: g14110.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3350,status:3], valid-1 # PASA_UPDATE: g14110.t1, single gene model update, valid-1, status:[pasa:asmbl_3349,status:3], valid-1 NODE_2043_length_7961_cov_33.9011 . gene 129 2193 . + . ID=g14110;Name=g14110.t1 NODE_2043_length_7961_cov_33.9011 . mRNA 129 2193 . + . ID=g14110.t1.1.5b6be70b;Parent=g14110;Name=g14110.t1 NODE_2043_length_7961_cov_33.9011 . five_prime_UTR 129 231 . + . ID=g14110.t1.1.5b6be70b.utr5p1;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . exon 129 475 . + . ID=g14110.t1.1.5b6be70b.exon1;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . CDS 232 475 . + 0 ID=cds.g14110.t1.1.5b6be70b;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . exon 624 674 . + . ID=g14110.t1.1.5b6be70b.exon2;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . CDS 624 674 . + 2 ID=cds.g14110.t1.1.5b6be70b;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . exon 890 1188 . + . ID=g14110.t1.1.5b6be70b.exon3;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . CDS 890 1188 . + 2 ID=cds.g14110.t1.1.5b6be70b;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . exon 1475 1567 . + . ID=g14110.t1.1.5b6be70b.exon4;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . CDS 1475 1567 . + 0 ID=cds.g14110.t1.1.5b6be70b;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . exon 1853 2193 . + . ID=g14110.t1.1.5b6be70b.exon5;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . CDS 1853 2086 . + 0 ID=cds.g14110.t1.1.5b6be70b;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . three_prime_UTR 2087 2193 . + . ID=g14110.t1.1.5b6be70b.utr3p1;Parent=g14110.t1.1.5b6be70b NODE_2043_length_7961_cov_33.9011 . mRNA 129 2193 . + . ID=g14110.t1;Parent=g14110;Name=g14110.t1 NODE_2043_length_7961_cov_33.9011 . five_prime_UTR 129 231 . + . ID=g14110.t1.utr5p1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . exon 129 475 . + . ID=g14110.t1.exon1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . CDS 232 475 . + 0 ID=cds.g14110.t1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . exon 624 674 . + . ID=g14110.t1.exon2;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . CDS 624 674 . + 2 ID=cds.g14110.t1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . exon 890 1188 . + . ID=g14110.t1.exon3;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . CDS 890 1188 . + 2 ID=cds.g14110.t1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . exon 1466 1567 . + . ID=g14110.t1.exon4;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . CDS 1466 1567 . + 0 ID=cds.g14110.t1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . exon 1853 2193 . + . ID=g14110.t1.exon5;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . CDS 1853 2086 . + 0 ID=cds.g14110.t1;Parent=g14110.t1 NODE_2043_length_7961_cov_33.9011 . three_prime_UTR 2087 2193 . + . ID=g14110.t1.utr3p1;Parent=g14110.t1 #PROT g14110.t1.1.5b6be70b g14110 MSYIYFATDSPSVQRSANNTASDNSNVHVTVNTGGWIRPATMSTQVEAYDSVKESGDKTPACLCPSFIPGLLSVVFPFVSIFCCYTVTQGEEVVVLHYGKYSGTNREPGCACTPVFGREMRHVSVQKRTINLRDVRVLDIHGNPIVVSSVVMYSVINSKKAALDVSNYEMFVADQAAVALKQVVALFPYEATETGEACEPAQVYARLRDVLQEKVIQAGITVHSVQLDALNYAPEIAGAMLKRQQAKALIDARALIVKSAVGIAVDAVQQLEARGIGLTEQEKGRLVTNILTITTGETAAVPTIPI* #PROT g14110.t1 g14110 MSYIYFATDSPSVQRSANNTASDNSNVHVTVNTGGWIRPATMSTQVEAYDSVKESGDKTPACLCPSFIPGLLSVVFPFVSIFCCYTVTQGEEVVVLHYGKYSGTNREPGCACTPVFGREMRHVSVQKRTINLRDVRVLDIHGNPIVVSSVVMYSVINSKKAALDVSNYEMFVADQAAVALKQVVALFPYEATETGEACLKKEPAQVYARLRDVLQEKVIQAGITVHSVQLDALNYAPEIAGAMLKRQQAKALIDARALIVKSAVGIAVDAVQQLEARGIGLTEQEKGRLVTNILTITTGETAAVPTIPI* # ORIGINAL: g12362.t1 original gene structure, not modified by PASA NODE_609_length_20268_cov_53.6437 AUGUSTUS gene 4285 4911 . + . ID=g12362;Name=g12362.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS mRNA 4285 4911 . + . ID=g12362.t1;Parent=g12362;Name=g12362.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 4285 4637 . + . ID=g12362.t1.exon1;Parent=g12362.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 4285 4637 . + 0 ID=cds.g12362.t1;Parent=g12362.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 4782 4911 . + . ID=g12362.t1.exon2;Parent=g12362.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 4782 4911 . + 1 ID=cds.g12362.t1;Parent=g12362.t1 #PROT g12362.t1 g12362 MGTGMGMRLVTSPTEPASTSSMDSRVGNANVCVTSSPKSVASDDQDDLHPKKLIPVHALDLAADGLILPHVDNVEASGGGIAALSLMSTVIVRLEGQDERKGAALDVLVKPRSLYMQRGVFRYKYTHAVLGQSESFFNGAPVLRSRRISLMLRDALPPTK* # ORIGINAL: g12364.t1 original gene structure, not modified by PASA NODE_609_length_20268_cov_53.6437 AUGUSTUS gene 7339 9462 . + . ID=g12364;Name=g12364.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS mRNA 7339 9462 . + . ID=g12364.t1;Parent=g12364;Name=g12364.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 7339 9462 . + . ID=g12364.t1.exon1;Parent=g12364.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 7339 9462 . + 0 ID=cds.g12364.t1;Parent=g12364.t1 #PROT g12364.t1 g12364 MLRHVRVTYAAASRSLTAAAAAQGYTTSPCRFHASSSAHSAVKKDDNAFKPQKEDTAEGTLWIDRRTTTTTTNRTSALDKPRTTPMQTAVLKSSESVQNLSSSQTSPTWDDSAPTVSSDAIGDGMLSEYNRRISRAQRSGNTRAALGVLAEMKTQGLQPNVITYSSLIAAAAQSGNGPLAFSIYDEMRLQGVSPNAITVTSLLEACARNSRKVMYDDALRIFRECSDTLGIRPDVPMVNALLKVLSSPGSTHLSAAFSVVEEGKSLQMDGFPNKTTYMMLASGCFTRDDRRRLTSMLPREPLVDEVAVWTVLMQSAVVGAISGAARKARHAFAVNEENLRLSQSSDFWEIEDDSVTFASSTTLVVSESTHAPSPSDTAKGDAGHVVGAAASCFSDDAAILWARASEERPHNMAQTTAGTVRMGRRVSVGAAEVQEVLAEMRARGITPSSATWITALQYNAVLAREVEAIISSSGTPLDRGLAVWLIRAYGRQNDLKAALSVFERAVSMPGTKRSRNDRGNDDTNRHIPRVYGAAIAACADAQDLRSAERVVQLARDSDVVLTEPQLNAYMKVAAKCGYGGHAVQVYDEMRAMRVRMTVLTFTTLFDACANNTKGVLVRDAMRAREDMAGEGVVPDAICLSAYVCVFVAADDVDGALSAFSDAECFAARGFPTAAAINAMRAVCKTIPHRRKLGETLAAFRSAGLSGT* # ORIGINAL: g12363.t1 original gene structure, not modified by PASA NODE_609_length_20268_cov_53.6437 AUGUSTUS gene 5569 6966 . - . ID=g12363;Name=g12363.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS mRNA 5569 6966 . - . ID=g12363.t1;Parent=g12363;Name=g12363.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 6721 6966 . - . ID=g12363.t1.exon1;Parent=g12363.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 6721 6966 . - 0 ID=cds.g12363.t1;Parent=g12363.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 5569 6591 . - . ID=g12363.t1.exon2;Parent=g12363.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 5569 6591 . - 0 ID=cds.g12363.t1;Parent=g12363.t1 #PROT g12363.t1 g12363 MDGIGEADVLRESLLRPSLGSIETGGLCHVHAMPAANNALPSVSIVMAIHNAAPFLSDAIEGILSQTYAGPLEYSAYNDASTDESAAVVVSFLPRFTKRGISVRLGGAFPASLANNNDIVGFTFHPTPSSSSDDASTMRPKGVGGATNQAIAQSSGECLCIADADDIMLPRRVEAQVVACMRNASIGDRVIVGCNFTRIPEGSTDRYTRWLNSIDGDSLYSQRFVEVTLIKPSWMLTRCAYELSGPFDEGGRGVPEDLIFFNSHVESGGLLCKATEELLVYRYHENAATHAVTRETLWDIRMDAVQRCVIDAWVREHGGFTIWSNGKEGRKFYRSLSENNRNAVRCFCDVDAKKIGRGVYEHIEGRVCVRKVPVVHFDDVAVHPPIVVCVKMDLTGGAFEQIFGTFVEARGLVEGRDYLYFS* # PASA_UPDATE: g12365.t1, single gene model update, valid-1, status:[pasa:asmbl_8465,status:12], valid-1 NODE_609_length_20268_cov_53.6437 . gene 10476 16629 . + . ID=g12365;Name=g12365.t1 NODE_609_length_20268_cov_53.6437 . mRNA 10476 16629 . + . ID=g12365.t1;Parent=g12365;Name=g12365.t1 NODE_609_length_20268_cov_53.6437 . exon 10476 10645 . + . ID=g12365.t1.exon1;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . CDS 10476 10645 . + 0 ID=cds.g12365.t1;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . exon 10967 13064 . + . ID=g12365.t1.exon2;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . CDS 10967 13064 . + 1 ID=cds.g12365.t1;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . exon 13264 16629 . + . ID=g12365.t1.exon3;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . CDS 13264 16353 . + 0 ID=cds.g12365.t1;Parent=g12365.t1 NODE_609_length_20268_cov_53.6437 . three_prime_UTR 16354 16629 . + . ID=g12365.t1.utr3p1;Parent=g12365.t1 #PROT g12365.t1 g12365 MSDSRKSTPVKKEKENEKLTAAFGSGSPAAVQGGAGAIACAGARVAQLSGLPTISTTPNGKRPIAVDTPGARGLPSPGTPAAGEPAAYHDGMLDSFSGPCPLCMPVTSRPLRPNNKRVLANNKAEKSPLVQITVDGKKLTVHNDCRLWSNLCRDFMDVLQARQTAECAFCRLGGAVLQCDNTSCAKHYHVPCARARKEGSVYFLELIEDKRDGPQGLGYITAPAADKGPLPESDCATDNHIFYCNKKCWSLHIGRAVDQFRLLSETSTNNNSSTGATYQAMVLNPNFALAGTHGELALSDARRKLLEELKTSLQVIGRCGPAPLADILADVQGEIEHLNSAILSGVKVQPSVVLLGPNGFGKSTIANILLRLTSVDPETYCSQAWKDRRMGLEALSPAVLTTEQAEEAIVRTLPDDDWEESAEARDKSVRKDLASIDGALKAYCEQGSIAKLQGFVLPACNKDGTSTTSASIEMRHGLTYHSLEVYEKEANVRQDCFHFVERLREKRKNDKPDEEFALSQRRFLLATTIGKGHEDYPFQQLTKEDVAHIQTEEDVPIHPDVAKVLGLCVITAGNGRDPEWDRMYVRSRLYSLMGKSDDDSQCSPKKAAKYLRRSAILSNLSVFVPSSLLEGGVRLIDTPGTLEDDCLKVKARRTALNSASTVLLVDKRMVLAPEKGLAELCETTFFQNMVDSPDRYRLVALHYMELENRTKFQDFEESRMATVNMAASSKKYICKYMTGELQEREEERFKRNNPGQEVDDDAVERRVAELSASFSQSVEAITIFPVMFASLALNVDFVDDYVGTPGAREVAKTLGMESLIRIFRMRPNEELREVLAEARSDARPMKKIIQRCVDFVSRSNSDAEYARSDNGIALAQRAKDLAKASPREVTWRTQAPGALQQVFNQMKTVLGDIVGRTFGDPAFADTLRASFASGMERLREDVKGHKVTQLLLAANPTYSGISRKFPIKDRFFPLGNGLFEMARLPAIHAALHALANENIKIIEDSLMKFATGQLTTSRNKLLDPSAKQLLDTAFEDNVTELHNRARAFFHLGGKRYLTIEYFRELAGQWEMEIIGDVVKTATFKNVVSQLALNSPPNRSADAQRTIIELGETFVRVTATKTKQKLQKIMDPQLVKMQTAVQGSATQRVQPASISTLISVFKSLSNLGKVNVRPTDTLRIKQVFEGVLRAIESTEKALTEEATPLADTSIVFQSVRTRIVREGLFRHARMHGMEPNEPIAAIATSYYPIDIAPYTPQTSLGSHARILQGNGAFGIIENAVGAAGLKLRLAHATEDDDQSPVTPQRQSAFAALAAAMYGEDSSNAGDAEFRLRAMACAQLREKYSRVPPNVREVETGYSGVSLDALVEGIMLGSAPVDEFVLVVLSETLGVTINVWYATDRGVRVRHILPDEISASYTDTVVERICIPAYHLAVVGMYNEDERSYPVFAALHRASDDVEMSDEADQDQDGWNDSWRELKEDGPSAGVAQVSSLAPADAGESTPMDITMEATPTDASRAGGKRPVKRRLNEMSGGGGVDVHPSPKRKRVSFAHDAVRDLQETDRATKDEGKLAIYIVVDFATLLGIEKRRSGSADLELRRLMTKGANVAKNSNITLNLVIPQSVREQLTRVKKVQDEDGRPALRVWDGIEAMKKSKEESLAVIDEPDAFAKEAETRVNAGFASGRRSANQAYCSADVYQNKLRGMPGRVLLVQDRDAQPTTSFASQGRVPTVSIAALYAMFDGTDNWQSDNPTTDKSGAESTHRKVAAALANWNRVLRNTAPGSRQSK* # ORIGINAL: g12361.t1 original gene structure, not modified by PASA NODE_609_length_20268_cov_53.6437 AUGUSTUS gene 52 1347 . - . ID=g12361;Name=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS mRNA 52 1347 . - . ID=g12361.t1;Parent=g12361;Name=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 1051 1347 . - . ID=g12361.t1.exon1;Parent=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 1051 1347 . - 0 ID=cds.g12361.t1;Parent=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 623 903 . - . ID=g12361.t1.exon2;Parent=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 623 903 . - 0 ID=cds.g12361.t1;Parent=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 52 367 . - . ID=g12361.t1.exon3;Parent=g12361.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 52 367 . - 1 ID=cds.g12361.t1;Parent=g12361.t1 #PROT g12361.t1 g12361 MADPVARFAITASDLDALTEVGDGTAATPGSAEEVSSEGPLGILRGKYGGVEGLVRALRTDTRIGVSSASEDAASRRRAFGSNYVAPQKAKGLLSLMWEAVQDATLIVLLVCGCASIALGVTEGDRKTGWIEGASILVAVAVVVTVTAVNDYQKERQFRKLNDVSEDIQVKVLRDGQHTQISTRDLVVGDIVRLEVGDILPADGVLLTGHDLKTDESSLTGESELVRKSSDEAPFMYSGTRLMEGNGKMIVVAVGEHSQAGKIRKLITHRAEGKGKDGAKKKRGDRDKKARDKKAAKK # ORIGINAL: g12366.t1 original gene structure, not modified by PASA NODE_609_length_20268_cov_53.6437 AUGUSTUS gene 18380 19966 . - . ID=g12366;Name=g12366.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS mRNA 18380 19966 . - . ID=g12366.t1;Parent=g12366;Name=g12366.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 19596 19966 . - . ID=g12366.t1.exon1;Parent=g12366.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 19596 19966 . - 0 ID=cds.g12366.t1;Parent=g12366.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS exon 18380 19037 . - . ID=g12366.t1.exon2;Parent=g12366.t1 NODE_609_length_20268_cov_53.6437 AUGUSTUS CDS 18380 19037 . - 1 ID=cds.g12366.t1;Parent=g12366.t1 #PROT g12366.t1 g12366 MSSFPPKWEYISGILFNVLVDPASTVGAELVARRRKARGHELRCAIQTKMAVALCLQRYARENPDVDVNAFYPRSFVFREESNFDQTAQQFIEYNDGILRRIEATRQSGKTATTTTTRYLVKLGTRGFDGQGIRVFDSAPALLSAVNLSLSTEGPLVAQKLIDSALTFRGRRFVLRLYVLVTSLAPLELYINFRGTVVRGLVANDDETDTAATPIPAPSNSLGEVVESGGATVAEDPDPWVAENDDGILRLFNESNSMESTNAGGDTDAELDHKRLLANLALHDDDALDTLDSLLDYFRSLGLIDVESTHCPGDQAHCKDNLRLVEHLRTSRFLFQTVSALG* # ORIGINAL: g14280.t1 original gene structure, not modified by PASA NODE_2887_length_4839_cov_41.3397 AUGUSTUS gene 1875 4761 . - . ID=g14280;Name=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS mRNA 1875 4761 . - . ID=g14280.t1;Parent=g14280;Name=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS exon 3813 4761 . - . ID=g14280.t1.exon1;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS CDS 3813 4761 . - 0 ID=cds.g14280.t1;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS exon 3545 3696 . - . ID=g14280.t1.exon2;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS CDS 3545 3696 . - 2 ID=cds.g14280.t1;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS exon 2514 3347 . - . ID=g14280.t1.exon3;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS CDS 2514 3347 . - 0 ID=cds.g14280.t1;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS exon 1875 2342 . - . ID=g14280.t1.exon4;Parent=g14280.t1 NODE_2887_length_4839_cov_41.3397 AUGUSTUS CDS 1875 2342 . - 0 ID=cds.g14280.t1;Parent=g14280.t1 #PROT g14280.t1 g14280 MLTDSELIPWESVWRFGNGTLHYPFELIAVTVDSATGVVECFEASRVLGPSLLDCGRGTKKTWKALDNRISIGRLRCNGQLLIIDNPAVSLVTNPEFDAIVPVLTWEQLVVFVNSSNILGARVGDMGSIQTQEFAVLESRRAAVWALRMAMAAPGAWLHPAPLLDKKPAAKPTVDIGNAKIHLPVAIFQGRIFVDVVSLAKTVLSSTDTQQSNDRKKRRKVEPVDNATAINCLLSWTRETIEQWDKTRDLFHDGFGLSLPGLLCLTTNKFTKAHQILHSSHKNILARIFSNARKALNMPYGYDSTLAAQQANAPIHKTPWLEVQSLVCDVLRTNEADGPTGMIAPPGKNPGVLAVILPHNETAHAKLSAIRRLRAPKMDDWTEELPQKGWLAFTGSETFVVIDVLPRPDTMQPIWLAALYMSATNCQDYAAYLAKWAQYGHTLASIATFNQIVVRGDNRAGGQGSMFMFGNHTEYNPPSNRPIDQNKDYAGYAHNPAAVKRRIKAKQADAIWDVIADVVADAVADGIADAERTAKATAKAIKATAKATKSPAKTPAKATKAPAKTTTGPAKTTKTAKTTKTTKTTNATTTTAKAIVKAARDIATKTAVSVSEHDRDGNAFTASMTQHIHAMWMVWRYVFPTSAEETQAAAICEAVPAIGGMPANCVSVTFDYASSSHNDADHCWTMIVWADVPLETGVHGSLPPGPATPTSASPFEGGQFALYSYKILSKTLPGNTFIINSRAIFHGTRKLCRRSNPEKSVSQSRIGSAMMLQQKFISKISSVNDKLAAPLAHFDAAFQL* # PASA_UPDATE: g3193.t1, single gene model update, valid-1, status:[pasa:asmbl_3755,status:12],[pasa:asmbl_3756,status:12], valid-1 NODE_2205_length_7279_cov_38.7689 . gene 3107 6343 . + . ID=g3193;Name=g3193.t1 NODE_2205_length_7279_cov_38.7689 . mRNA 3107 6343 . + . ID=g3193.t1;Parent=g3193;Name=g3193.t1 NODE_2205_length_7279_cov_38.7689 . exon 3107 3837 . + . ID=g3193.t1.exon1;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . CDS 3107 3837 . + 0 ID=cds.g3193.t1;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . exon 4028 4545 . + . ID=g3193.t1.exon2;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . CDS 4028 4545 . + 1 ID=cds.g3193.t1;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . exon 4720 5544 . + . ID=g3193.t1.exon3;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . CDS 4720 5544 . + 2 ID=cds.g3193.t1;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . exon 5826 6343 . + . ID=g3193.t1.exon4;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . CDS 5826 6325 . + 2 ID=cds.g3193.t1;Parent=g3193.t1 NODE_2205_length_7279_cov_38.7689 . three_prime_UTR 6326 6343 . + . ID=g3193.t1.utr3p1;Parent=g3193.t1 #PROT g3193.t1 g3193 MPRLDVEVIKSADESAASKEARVDVDGDGDGDDLDTRDDILMSAHASALADGDDVAVVEGGDVNGGAMIGVIANERRHIDVRGGVGKGANVHNTSGLESGSASGATFGAQDTQPAPAKRPTSPRSRRRKLAGALRLLGIPETTMQKTSVPKDGDGVGMEDSMPQHDVPSSPSVMSDDGACDWDGGNRGDVRKDSKDERKDAKDAKEEKEAAAKARSAASSWWHAKSHASDEDLDADDVEPEVLRNAGVWTVRELARLRSKQIEALRVLYSSEARRIVLRLRQSHARYIEDRDGSLGLLPLPSVDAGRGANVGKVGLSDADVRPRPTIFLPFRRGWKAHLETKARAAAAAAAAAAAAAASAPTAGGGHRGGRSGGHQKGAATGNSTVSFVCHAHVGEKGDKARCGKQALPSSKFCFDHILHDPKQLLFKRCETEGCQVAVVRALNPGVCDAHITTASFPSLDAATFGDRSANTANNNEPDDTAPPPMPFAHDSVDKDTLDVHALMLGDIVDGMEGIEAMNSLDDVVGDTGAGAGGSQPDDVTDIEGAFDQIEREMDDAMEAAMEAAVRAGAPLSAMGAFGVGVEDASSGVGFGARGGLVRAGDLLRREVLGLSDDCEGEGVAAGGGDDMEVEVDEDAQAAAVIVDASVEPSAGEGVSADDSLAVDAANAPVPTAFVGGEVEARGAGPNDSLHGDVKGEMAGGNSVDEVDEDEEIDVEADGEDPAIQLRALHEQSKRTSLSHTPPTDNKSKDPASNENDHSTINYAGPQAAPHQMPITTPPATATPASSLAADQPPAHSSSSHGQSPTMPAGVRSSGSAVAAHFLTSFGKAASDDGDDNDVSEGDAVLLVSAPETGSGH* # PASA_UPDATE: g3191.t1, single gene model update, valid-1, status:[pasa:asmbl_3754,status:12], valid-1 NODE_2205_length_7279_cov_38.7689 . gene 304 1634 . - . ID=g3191;Name=g3191.t1 NODE_2205_length_7279_cov_38.7689 . mRNA 304 1634 . - . ID=g3191.t1;Parent=g3191;Name=g3191.t1 NODE_2205_length_7279_cov_38.7689 . five_prime_UTR 1524 1634 . - . ID=g3191.t1.utr5p1;Parent=g3191.t1 NODE_2205_length_7279_cov_38.7689 . exon 1386 1634 . - . ID=g3191.t1.exon1;Parent=g3191.t1 NODE_2205_length_7279_cov_38.7689 . CDS 1386 1523 . - 0 ID=cds.g3191.t1;Parent=g3191.t1 NODE_2205_length_7279_cov_38.7689 . exon 304 451 . - . ID=g3191.t1.exon2;Parent=g3191.t1 NODE_2205_length_7279_cov_38.7689 . CDS 304 451 . - 0 ID=cds.g3191.t1;Parent=g3191.t1;3_prime_partial=true #PROT g3191.t1 g3191 MSKSRVWETDPKGKSTLRVSESGNGSIKPRTIPQAFAETVAKYPRQTALQVKREGMWQKWTWSEYNGLVNKAAKSFIHMGVQSQDCVGILGFNSP # ORIGINAL: g3192.t1 original gene structure, not modified by PASA NODE_2205_length_7279_cov_38.7689 AUGUSTUS gene 2383 2965 . + . ID=g3192;Name=g3192.t1 NODE_2205_length_7279_cov_38.7689 AUGUSTUS mRNA 2383 2965 . + . ID=g3192.t1;Parent=g3192;Name=g3192.t1 NODE_2205_length_7279_cov_38.7689 AUGUSTUS exon 2383 2512 . + . ID=g3192.t1.exon1;Parent=g3192.t1 NODE_2205_length_7279_cov_38.7689 AUGUSTUS CDS 2383 2512 . + 0 ID=cds.g3192.t1;Parent=g3192.t1 NODE_2205_length_7279_cov_38.7689 AUGUSTUS exon 2658 2965 . + . ID=g3192.t1.exon2;Parent=g3192.t1 NODE_2205_length_7279_cov_38.7689 AUGUSTUS CDS 2658 2965 . + 2 ID=cds.g3192.t1;Parent=g3192.t1 #PROT g3192.t1 g3192 MDVGAGDANAQDAAVKLSLDGIGLDVNDDTAPAGRIRKRSNDDASAKSQLCHHKHLLIEKLATDFGAADELDADADVTSLPSSLVVSEHPCKHGASGCTLGRLSGFDVCARHLIEDPTSPFKACRFVSRTSACINLIPKTLSDKV* # PASA_UPDATE: g13953.t1, single gene model update, valid-1, status:[pasa:asmbl_6552,status:12], valid-1 NODE_3796_length_2735_cov_41.8477 . gene 225 2642 . + . ID=g13953;Name=g13953.t1 NODE_3796_length_2735_cov_41.8477 . mRNA 225 2642 . + . ID=g13953.t1;Parent=g13953;Name=g13953.t1 NODE_3796_length_2735_cov_41.8477 . five_prime_UTR 225 274 . + . ID=g13953.t1.utr5p1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . five_prime_UTR 507 513 . + . ID=g13953.t1.utr5p2;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 225 274 . + . ID=g13953.t1.exon1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 507 618 . + . ID=g13953.t1.exon2;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 514 618 . + 0 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 914 988 . + . ID=g13953.t1.exon3;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 914 988 . + 0 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 1198 1438 . + . ID=g13953.t1.exon4;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 1198 1438 . + 0 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 1745 1900 . + . ID=g13953.t1.exon5;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 1745 1900 . + 2 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 1993 2093 . + . ID=g13953.t1.exon6;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 1993 2093 . + 2 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 2310 2474 . + . ID=g13953.t1.exon7;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 2310 2474 . + 0 ID=cds.g13953.t1;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . exon 2619 2642 . + . ID=g13953.t1.exon8;Parent=g13953.t1 NODE_3796_length_2735_cov_41.8477 . CDS 2619 2642 . + 0 ID=cds.g13953.t1;Parent=g13953.t1 #PROT g13953.t1 g13953 MMRMGRATPSRLSAPVWVLSHALSATKLRAQVPQKGVIAILVARSFGTTRVVLSEKPKEKLFDKILIANRGEIACRVMRTCKKLGIKTVAVHSTADNESLHVKMADEAVCIGPPATSKSYLNHRVILQAVKDTGAQAVHPGYGFLSENAEFADELAKIGVEFIGPSNFSIDAMGDKIHSKRLALQAKVNTIPGHDGEVPDAETAVKISREITYPVMIKASAGGGGKGMRIAWNDEEAREGFRIASSEAASSFGDNRLLIEKFIDNPRHIEIQILGDKHGNVYLLRSNR* # ORIGINAL: g3132.t1 original gene structure, not modified by PASA NODE_4897_length_1155_cov_81.2611_potentialcontaminant AUGUSTUS gene 26 125 . - . ID=g3132;Name=g3132.t1 NODE_4897_length_1155_cov_81.2611_potentialcontaminant AUGUSTUS mRNA 26 125 . - . ID=g3132.t1;Parent=g3132;Name=g3132.t1 NODE_4897_length_1155_cov_81.2611_potentialcontaminant AUGUSTUS exon 26 125 . - . ID=g3132.t1.exon1;Parent=g3132.t1 NODE_4897_length_1155_cov_81.2611_potentialcontaminant AUGUSTUS CDS 26 125 . - 0 ID=cds.g3132.t1;Parent=g3132.t1 #PROT g3132.t1 g3132 MASALFLDHERNFGVMTAEITSRIHTTIPGESG # ORIGINAL: g6254.t1 original gene structure, not modified by PASA NODE_2989_length_4584_cov_41.0113 AUGUSTUS gene 242 2587 . - . ID=g6254;Name=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS mRNA 242 2587 . - . ID=g6254.t1;Parent=g6254;Name=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 2539 2587 . - . ID=g6254.t1.exon1;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 2539 2587 . - 0 ID=cds.g6254.t1;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 1898 2256 . - . ID=g6254.t1.exon2;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 1898 2256 . - 2 ID=cds.g6254.t1;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 1215 1667 . - . ID=g6254.t1.exon3;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 1215 1667 . - 0 ID=cds.g6254.t1;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 755 883 . - . ID=g6254.t1.exon4;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 755 883 . - 0 ID=cds.g6254.t1;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 242 322 . - . ID=g6254.t1.exon5;Parent=g6254.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 242 322 . - 0 ID=cds.g6254.t1;Parent=g6254.t1 #PROT g6254.t1 g6254 MALFEFGATCANSHVIVSLRSTANVSTCLRRPASSLFHSSARANASVRSLEVGILGMPNVGKSTLFNTLTNGNAEASNFPFCTIDPNVGILRVDDPNLKILSDLVSARRIIPAEVRVVDIAGLVKGASEGCGLGNKFLSHVRQVDALLHVVRCFSDDTVTHVDGSIDPTRDLELITTELCLSDAQSVEKANTRKSGKGVTGPVGAVLNDPASFAMRKSTLDALHGWLAAGKTARSFLVRSGGDGTDLLSKVERTVVNDELQLLTAKPVMYVANVDENQAIDIAEGKKIIEVEAVAKHGPVVPVCIRTECELSRMETAEERSEMLGFLGMKEPSVKAIERGVQSLLGLQSYYTAGEVE # ORIGINAL: g6255.t1 original gene structure, not modified by PASA NODE_2989_length_4584_cov_41.0113 AUGUSTUS gene 2971 4283 . + . ID=g6255;Name=g6255.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS mRNA 2971 4283 . + . ID=g6255.t1;Parent=g6255;Name=g6255.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 2971 3132 . + . ID=g6255.t1.exon1;Parent=g6255.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 2971 3132 . + 0 ID=cds.g6255.t1;Parent=g6255.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS exon 3368 4283 . + . ID=g6255.t1.exon2;Parent=g6255.t1 NODE_2989_length_4584_cov_41.0113 AUGUSTUS CDS 3368 4283 . + 0 ID=cds.g6255.t1;Parent=g6255.t1 #PROT g6255.t1 g6255 MASKTAKFDDYRAGYDLSSDDEKPSMGIGMIAGKSSILSSLYNAQNKAQQKATAAAAARAPPPKPAVKGGAGQSILQRAQSRLKGEGPPPPASQSSSGGKPGLSRQVSFGATPTRTKTPDSDSGEDSGSEKDSDDEIQAYLKSLTAKSAAKDREDREDGGGGTSVDVVTDDDSDGIDSDIDEKDWKVAVSSGFLKKGTSGDDTKPPPKSAMKQTFGGGKGAGKSINDDSSDMSEPSSYVPPAKKRLPPARNAVALNSDDEDMKKFIQGLSDSDTESDGPAARAPVVASAKAKAQVSVGAKGASLSSVASKNNARSESSEDEVDEEDEEEDEDARRRKAAAAAFLAKRSPSVSSGIGNAK # ORIGINAL: g6057.t1 original gene structure, not modified by PASA NODE_1739_length_9465_cov_41.1411 AUGUSTUS gene 2775 4913 . - . ID=g6057;Name=g6057.t1 NODE_1739_length_9465_cov_41.1411 AUGUSTUS mRNA 2775 4913 . - . ID=g6057.t1;Parent=g6057;Name=g6057.t1 NODE_1739_length_9465_cov_41.1411 AUGUSTUS exon 2775 4913 . - . ID=g6057.t1.exon1;Parent=g6057.t1 NODE_1739_length_9465_cov_41.1411 AUGUSTUS CDS 2775 4913 . - 0 ID=cds.g6057.t1;Parent=g6057.t1 #PROT g6057.t1 g6057 MKVSAQALCLLIAILSLSSLASSSGSSTECDTSDPLIKRYLTQIKKYQKDAAKWDKDFEKYKASLNATDSVGSVAASGQQVYVSVSSLDTVSLATLASSWSGYDIRSGSLLSINAPFNSTTPVTETVDSSKFQMCFTDSQSQMMSAMSASASISGSVFGFSTSVSSSFSTGSSATADTSSFAVYMATRTQITALKHDDIVKNLPLSNAALKAAEEPEEFLKLYGTHFVAAKVYGCNATLVGSYEFTSSSAKTSFSAKVSAGFSSFGFSAEAAASLDKAASSVDSNVRVSVAAYGDLISSISVKTPTELSSWATAFTTDWPEACKTHPTNSIIMFAIQPWSTHRQLRVTNVAPVLASFADTASVGLSDALALRSLLLTRLQAALDDIAGDLAGGKSAATLNTTYACDNVILRTPDQSLVADLQSALTDVQSIESPLDKPGQISVFTFLHNIDRVWKKYNTLLLSATHSWDIEITATVTMYDGSTLAGWPTNEASFSRTTTVSLFDSGYKDGVGVVFAVTNEKGSAGISWMPCGANCNSYGSSSGVHVSTGQADPMMVTVAGSNLFEQSEDTSLPHSETLSNQWMACSVKSRLEGADNLVHGEDYPFICGGHKYYGSDQSWTSLWHTCPYRWLDASTYPVDTSVWIEDFDAVNTGYLSSGVGSINRRGGTLGVSLVPAFCPLPLALNDQDTTSIPAVPVVSFRISVKPRLFGTC* # PASA_UPDATE: g6058.t1, single gene model update, valid-1, status:[pasa:asmbl_2485,status:12], valid-1 NODE_1739_length_9465_cov_41.1411 . gene 6742 9346 . - . ID=g6058;Name=g6058.t1 NODE_1739_length_9465_cov_41.1411 . mRNA 6742 9346 . - . ID=g6058.t1;Parent=g6058;Name=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 9276 9346 . - . ID=g6058.t1.exon1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 9276 9346 . - 0 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 8886 9044 . - . ID=g6058.t1.exon2;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 8886 9044 . - 1 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 8433 8677 . - . ID=g6058.t1.exon3;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 8433 8677 . - 1 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 8114 8317 . - . ID=g6058.t1.exon4;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 8114 8317 . - 2 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 7879 7964 . - . ID=g6058.t1.exon5;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 7879 7964 . - 2 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 7522 7602 . - . ID=g6058.t1.exon6;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 7522 7602 . - 0 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . exon 6742 7209 . - . ID=g6058.t1.exon7;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . CDS 7084 7209 . - 0 ID=cds.g6058.t1;Parent=g6058.t1 NODE_1739_length_9465_cov_41.1411 . three_prime_UTR 6742 7083 . - . ID=g6058.t1.utr3p1;Parent=g6058.t1 #PROT g6058.t1 g6058 MITYPSTYGVFEEGVKEVCEIVHKHGGQVYLDGANMNAQVGICRPGDIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPLVETGGPKSAGPVSATPWGSSSILPISWTYVKLMGFQGLRRSTMMAILNANYLASRLKDHYPILYVNKNGFCAHEFILDSRDLKESAGIEAVDIAKRLQDYGFHAPTMSWPVAGTLMIEPTESESKAELDRFADALIEIRKEVREIEQGRVDRVNNVLKNSPHSLDVLTRTTWDKPYSREQAAYPLPWLKQAKVFPSVGRVDDVFGDRNLVCACPPLESYAQQPQAPHDKAATA* # PASA_UPDATE: g6056.t1, single gene model update, valid-1, status:[pasa:asmbl_2486,status:3], valid-1 NODE_1739_length_9465_cov_41.1411 . gene 99 2367 . + . ID=g6056;Name=g6056.t1 NODE_1739_length_9465_cov_41.1411 . mRNA 99 2367 . + . ID=g6056.t1;Parent=g6056;Name=g6056.t1 NODE_1739_length_9465_cov_41.1411 . five_prime_UTR 99 140 . + . ID=g6056.t1.utr5p1;Parent=g6056.t1 NODE_1739_length_9465_cov_41.1411 . exon 99 2367 . + . ID=g6056.t1.exon1;Parent=g6056.t1 NODE_1739_length_9465_cov_41.1411 . CDS 141 2243 . + 0 ID=cds.g6056.t1;Parent=g6056.t1 NODE_1739_length_9465_cov_41.1411 . three_prime_UTR 2244 2367 . + . ID=g6056.t1.utr3p1;Parent=g6056.t1 #PROT g6056.t1 g6056 MMGSILARRSPTGDLRPRRESLHGLAFLIVVALTTVAFGTFACASATITSRSTKKPTCSITALQATYEQILERHEERVKNRTALALASAVLSPTPAFAVKVTEVGGFVSETNLLTGMWPGFDIRTGQLTYLNPLSTAQTSTLSHSSGVYSFAFQSSSQAVSDSLSASVSVGGGGFGFHLSASASYATQASSSSMSSSVTVYMLQIMQVESAQYSDAALSSYALLLANTDSQGFLDTYGTHAVVSKTRGCYATMTATYTFSSASAKQFFDASAAASVGFGAFSASVAASFDSAASSAESVYTLQVNVQGDAVTDAISAVGDSMKLADWASSFGDSGAWASSCAKLSPAPVRQIGVRGWSAFQQMSLLGVTPSLAVYGAADWNSLAQPMTRANLLASGLAAAVAFVTKMTGDADPNPVQFTASPSVSVCSAPFEVAIEGPTAVNFSAMQEGFTAVEQAFEDVYSFDGVGSQSDLSELATSFSKTIGDLWSQYNRILLASTTEWTFELSATIKTSGNAKVGSLLQPLLSFTSTRKFNTLTEFQSTSEAGIVLGGLQETPQWYECGGIGPVTCSAPDNSIGVSIFFGGVSDTAATVRLRGSRASEDTTTDCPSNFNECSELWWRPPSTAGLAGCRWIPSLLSYSNYDANNIWQLQRGVPSSVTVRILPCSVSALHSENAGAPYLYIDIEIKSTPTVWGACESED* # PASA_UPDATE: g6408.t1, single gene model update, valid-1, status:[pasa:asmbl_6542,status:12], valid-1 NODE_3787_length_2758_cov_38.432 . gene 361 1757 . - . ID=g6408;Name=g6408.t1 NODE_3787_length_2758_cov_38.432 . mRNA 361 1757 . - . ID=g6408.t1;Parent=g6408;Name=g6408.t1 NODE_3787_length_2758_cov_38.432 . five_prime_UTR 1588 1757 . - . ID=g6408.t1.utr5p1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . exon 1585 1757 . - . ID=g6408.t1.exon1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . CDS 1585 1587 . - 0 ID=cds.g6408.t1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . exon 1269 1352 . - . ID=g6408.t1.exon2;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . CDS 1269 1352 . - 0 ID=cds.g6408.t1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . exon 982 1137 . - . ID=g6408.t1.exon3;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . CDS 982 1137 . - 0 ID=cds.g6408.t1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . exon 754 873 . - . ID=g6408.t1.exon4;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . CDS 754 873 . - 0 ID=cds.g6408.t1;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . exon 361 538 . - . ID=g6408.t1.exon5;Parent=g6408.t1 NODE_3787_length_2758_cov_38.432 . CDS 361 538 . - 0 ID=cds.g6408.t1;Parent=g6408.t1;3_prime_partial=true #PROT g6408.t1 g6408 MAAIAFDEVGYTVLQYLENAIAICRGSIQGEAIEEVTSAVCLYQVFFEARDPAVPESFVVDILGTRQQLMTGVERIVDAAKTCFDVDEHEPDRDSSEFVKAAVYLVRLTVTTLLRHLTQTRALRCAKCAGTIDDDAIFCDREHSDGNSAWFHRKCVGLVTCPLEDGVSWRCDTCERIAKG # PASA_UPDATE: g4483.t1, single gene model update, valid-1, status:[pasa:asmbl_4735,status:12], valid-1 NODE_2659_length_5532_cov_40.9802 . gene 166 2214 . + . ID=g4483;Name=g4483.t1 NODE_2659_length_5532_cov_40.9802 . mRNA 166 2214 . + . ID=g4483.t1;Parent=g4483;Name=g4483.t1 NODE_2659_length_5532_cov_40.9802 . exon 166 316 . + . ID=g4483.t1.exon1;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . CDS 166 316 . + 0 ID=cds.g4483.t1;Parent=g4483.t1;5_prime_partial=true NODE_2659_length_5532_cov_40.9802 . exon 789 922 . + . ID=g4483.t1.exon2;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . CDS 789 922 . + 2 ID=cds.g4483.t1;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . exon 1367 1514 . + . ID=g4483.t1.exon3;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . CDS 1367 1514 . + 0 ID=cds.g4483.t1;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . exon 1716 1793 . + . ID=g4483.t1.exon4;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . CDS 1716 1793 . + 2 ID=cds.g4483.t1;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . exon 1914 2214 . + . ID=g4483.t1.exon5;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . CDS 1914 2041 . + 2 ID=cds.g4483.t1;Parent=g4483.t1 NODE_2659_length_5532_cov_40.9802 . three_prime_UTR 2042 2214 . + . ID=g4483.t1.utr3p1;Parent=g4483.t1 #PROT g4483.t1 g4483 HANPTPSSSTNPTQQPSADRYYVSRQWMSRWGTCSDPGPIDGFDIFCKHGGVRPALVHAVKDFVLEIPASAWHRLVDAHGGGPAVTKLVKCVVCETDAEQIAKRRQYESARISELDRTDGHGGWYLISAQWLNEWHAFKNSKDPNHRPPGPVRNTDMLQADGQPKPKLRAALHYRGIGKEVWEFFVQVYGGGPSIRRANIDIYLPPLSDSER* # ORIGINAL: g4484.t1 original gene structure, not modified by PASA NODE_2659_length_5532_cov_40.9802 AUGUSTUS gene 3089 5532 . + . ID=g4484;Name=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS mRNA 3089 5532 . + . ID=g4484.t1;Parent=g4484;Name=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 3089 3220 . + . ID=g4484.t1.exon1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 3089 3220 . + 0 ID=cds.g4484.t1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 3395 3469 . + . ID=g4484.t1.exon2;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 3395 3469 . + 0 ID=cds.g4484.t1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 4041 4134 . + . ID=g4484.t1.exon3;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 4041 4134 . + 0 ID=cds.g4484.t1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 4543 4609 . + . ID=g4484.t1.exon4;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 4543 4609 . + 2 ID=cds.g4484.t1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 4954 5155 . + . ID=g4484.t1.exon5;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 4954 5155 . + 1 ID=cds.g4484.t1;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS exon 5360 5532 . + . ID=g4484.t1.exon6;Parent=g4484.t1 NODE_2659_length_5532_cov_40.9802 AUGUSTUS CDS 5360 5532 . + 0 ID=cds.g4484.t1;Parent=g4484.t1 #PROT g4484.t1 g4484 MADSSTHGAEGPYCAALTPTARLCDKDREKMLYDWNATAAHLPEVCLHDLIQQQIERTPTALCALFENTGSPITFREFNIRTNRVANFLVQHGVKPDHLIGVCCNRSIDMLIAMTGVLKSGAAYVALDPSFPIDRLAYIVEDARARIILTEPALNDIVSTFTGMLHTKKSDFPETVTNLDSEYVVTVTTTVGTESSQVVDCVFVDTIAQANASHPEYDEYHRVDVKPTNLCYAIYTSGSTGKPKGVM # ORIGINAL: g2857.t1 original gene structure, not modified by PASA NODE_5620_length_778_cov_42.6145_potentialcontaminant AUGUSTUS gene 31 778 . - . ID=g2857;Name=g2857.t1 NODE_5620_length_778_cov_42.6145_potentialcontaminant AUGUSTUS mRNA 31 778 . - . ID=g2857.t1;Parent=g2857;Name=g2857.t1 NODE_5620_length_778_cov_42.6145_potentialcontaminant AUGUSTUS exon 31 778 . - . ID=g2857.t1.exon1;Parent=g2857.t1 NODE_5620_length_778_cov_42.6145_potentialcontaminant AUGUSTUS CDS 31 778 . - 0 ID=cds.g2857.t1;Parent=g2857.t1 #PROT g2857.t1 g2857 RTPGVGIGWLSAPTGAIGEYTNVRCINCTEELFAVNSVNGQADDSILPGSPSQYQENPMDSSELLSLIRQGYRFGSSYPQSVAGIQIDADNSFMTDHVSFDALLLRVGKIAIIAYAPVTSATEISVLSSGRLVLAGVDLISSPITVDGLLSMAYSTVVDSPITVRGSGWANFENCGFHIQTGRRATGGDETILTPALVVLSDESFATVTQLQLGTYLATTGNGGFASMSGDSVLAITNGNVQHISTLGS # ORIGINAL: g3296.t1 original gene structure, not modified by PASA NODE_1996_length_8171_cov_41.4954 AUGUSTUS gene 5595 7955 . + . ID=g3296;Name=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS mRNA 5595 7955 . + . ID=g3296.t1;Parent=g3296;Name=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 5595 6086 . + . ID=g3296.t1.exon1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 5595 6086 . + 0 ID=cds.g3296.t1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 6227 6329 . + . ID=g3296.t1.exon2;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 6227 6329 . + 0 ID=cds.g3296.t1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 6460 6701 . + . ID=g3296.t1.exon3;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 6460 6701 . + 2 ID=cds.g3296.t1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 6874 6964 . + . ID=g3296.t1.exon4;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 6874 6964 . + 0 ID=cds.g3296.t1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 7301 7356 . + . ID=g3296.t1.exon5;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 7301 7356 . + 2 ID=cds.g3296.t1;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 7783 7955 . + . ID=g3296.t1.exon6;Parent=g3296.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 7783 7955 . + 0 ID=cds.g3296.t1;Parent=g3296.t1 #PROT g3296.t1 g3296 MDEPEEVQVLDDEAADAGAALDISLTGAALGPVVPADATATGVVALQKKVSYTTLKPRRNGAHAHSHHGHGHGGQVHSHAAADSAGDRAIGSTVASSTVTRVVGVAGDRPAEGQTPGQAYDDENMDYWDELMRPLYFVDDRHKANARPESSGDQLIQKWRMKERMKTVSVALILCLRIGVDPPDVVKTSPCARMECWIDPFKLPPEKALETIGDCLQKQYERWQPRARYKLSLDPTVDEVKKLCSSLRRNAKDERVLMHYNGHGVPKPTINGEIWVFNKNYTQYIPLSIYDLQTWMGSPSIFVWDCSGAGMIVETFGQFASQREADYKRFLAQNPGQAPPPMLLPPKDCIQLAACSPTETLPMNPDLPADVFTACLTTPIPIALK # ORIGINAL: g3294.t1 original gene structure, not modified by PASA NODE_1996_length_8171_cov_41.4954 AUGUSTUS gene 2 3117 . + . ID=g3294;Name=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS mRNA 2 3117 . + . ID=g3294.t1;Parent=g3294;Name=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 2 2562 . + . ID=g3294.t1.exon1;Parent=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 2 2562 . + 2 ID=cds.g3294.t1;Parent=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 2772 2893 . + . ID=g3294.t1.exon2;Parent=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 2772 2893 . + 0 ID=cds.g3294.t1;Parent=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 3099 3117 . + . ID=g3294.t1.exon3;Parent=g3294.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 3099 3117 . + 1 ID=cds.g3294.t1;Parent=g3294.t1 #PROT g3294.t1 g3294 GGGSGGGGGGRSRGGLSHSTGGGLFDDPPSRPTSSGGGIAGGDDLGSSGGFVPSSGLGRSRGTLSASISSLTEIGADPAPPRTIGRMGRRATIDNIDLGDVLGGPQSPLTVQGSSHAGGGASAAVAVPPSPVPMRAASPIGSTSPQSNINAQSAPPPSSAGDGGAKPMFPWETRKPGEATPQPSAAPSAAPSAAPSAAPSVANSRPTTGEAHAPRGGLNSSAEMEELQRKIRDLENEKTQLAQQQQQAAESAAAGGRSTAVLNMTITQLEMKVTQLTSEKETEAREKQTLAAKVDELTRKLTLQVGALDPSQAEELREMLRRAEAERDRLKGVVEDLRRQKEEEATRADQLQREIARAQALLDAERTKREAVEAAMDAAVKSARDDLDVHRQRHREALEHQREDHERELEMQRQQHRHELQSAAESYAHGKKLGDLIQQVQNSTRQVDVLQRQIDSQRNTTLEERENAAREREAHARELAERVARQQADLDRERTGLQALVAKMEVSMREREQGLEKDRWTLAQEQSRLEARVSAFDGERQALVSRVQSEQSEIDRIKAALLDERRAVAAECAEERRTLAVERADVTARERALTDAERKVAHRASQLDADREAGLEAVKRERREVEERLASLRTERERLQQEQRAWHLDKEAIEMEKEKITALGLEVQRRAKDIERMFEAARSERVEAEQARAAAESVSLSIAADRSRAAEMAKGLRERERVIAEERLSLVKERRDRSRVSFAEDDVSSDPRLVRMEALRAKLGMSTREVAQSASHSARDGDHLMTSASMPLRNDADTAPQRLVMPSNAGAAAGRKAPHGGISQGGNVAKAYQRPVLRQVNSTLSKWMGDLAGDRTQLDEQSRYLASVHAHPTPKTVRYRADDGDDSASHKMTGNVILL* # ORIGINAL: g3295.t1 original gene structure, not modified by PASA NODE_1996_length_8171_cov_41.4954 AUGUSTUS gene 3757 4587 . - . ID=g3295;Name=g3295.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS mRNA 3757 4587 . - . ID=g3295.t1;Parent=g3295;Name=g3295.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS exon 3757 4587 . - . ID=g3295.t1.exon1;Parent=g3295.t1 NODE_1996_length_8171_cov_41.4954 AUGUSTUS CDS 3757 4587 . - 0 ID=cds.g3295.t1;Parent=g3295.t1 #PROT g3295.t1 g3295 MLSLSHLALSTSRGLRAELVSGSARPVSAYVAYRHSRPVAGSVLSGGAASTCRLALARSYAVGPFPRMPNQKKSASTMLYLTAMLVTTVTVSYASAPLYKAFCQATGYGGTTKHVKQTALDQLKPVKDRRVTVRFNADVSRSMQWKFRPQQKEVVVVPGETALAFYTATNPTDKPVIGVSTYNVIPFEAGQYFNKIQCFCFEEQRLNPHEQVDMPVFFFIDPEFAEDPLLFDVDTITLSYTFFESRSHELTQPQHSQQTQTPPTPTPISVSQPAAA* # ORIGINAL: g6948.t1 original gene structure, not modified by PASA NODE_2743_length_5259_cov_38.5269 AUGUSTUS gene 205 844 . + . ID=g6948;Name=g6948.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS mRNA 205 844 . + . ID=g6948.t1;Parent=g6948;Name=g6948.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS exon 205 294 . + . ID=g6948.t1.exon1;Parent=g6948.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS CDS 205 294 . + 0 ID=cds.g6948.t1;Parent=g6948.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS exon 701 844 . + . ID=g6948.t1.exon2;Parent=g6948.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS CDS 701 844 . + 0 ID=cds.g6948.t1;Parent=g6948.t1 #PROT g6948.t1 g6948 VKAQMDERGSSMTDSSPLVKIKQALARLKKETVEMEVRIGVVEHTLLSIKLRSKAQTHQEAHAASEAMGFAQFPVSF* # ORIGINAL: g6950.t1 original gene structure, not modified by PASA NODE_2743_length_5259_cov_38.5269 AUGUSTUS gene 3522 4721 . - . ID=g6950;Name=g6950.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS mRNA 3522 4721 . - . ID=g6950.t1;Parent=g6950;Name=g6950.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS exon 3522 4721 . - . ID=g6950.t1.exon1;Parent=g6950.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS CDS 3522 4721 . - 0 ID=cds.g6950.t1;Parent=g6950.t1 #PROT g6950.t1 g6950 MPLGVFSTETLSCIPLLVCPTPIRQAIESIVYAFGSVSAMLESTFLATYSSFRAVLGVADHFGRLRSHIAGIFAAFTLLRSLRMLIVRALRRMGIHSPRLEERLLPRDPVDAAGVLNPREYEAMLRGGAVRSWPLLLFGAVVIGIPWLVWRLLRDGADEDGADASSVAPGKMLSDGSGLALPARLLYDFDGRGSDELPSQRGDIVHVFVPRELIATNARLQQRAYDLGDPEVLSSISAAISSEWLWARSASSGGSLQGYVPGNYVELLNARQAAASLQPAPPAGHVPSVPAAHNSNYASSGNNSNSSNIINSNSASLFAANGDVSGAARVPGSFPDLRDFDPQASPGGVGSEAGAYGLRSDWSDAFDGSDVRSSVPGHVQAQLDRNAPEGNGDEYNYGQ* # ORIGINAL: g6949.t1 original gene structure, not modified by PASA NODE_2743_length_5259_cov_38.5269 AUGUSTUS gene 1573 2778 . - . ID=g6949;Name=g6949.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS mRNA 1573 2778 . - . ID=g6949.t1;Parent=g6949;Name=g6949.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS exon 1573 2778 . - . ID=g6949.t1.exon1;Parent=g6949.t1 NODE_2743_length_5259_cov_38.5269 AUGUSTUS CDS 1573 2778 . - 0 ID=cds.g6949.t1;Parent=g6949.t1 #PROT g6949.t1 g6949 MRHDDINRRAKLIIASDFDETITVTDTISCIANAAIDARRDADAKAQARSDWAAVVAAYLRDINEHKARLADYPVKSGDYRSLVDRLESQRTVEDASLDRVAASQVLRGLCAEQLAGVGRSVAVHEECARVLASAIATGSTVAIVSANWSRILIASALAVRGVSLSPAYIISNDLVVMEPEAVSEDPLTPPCASPASESCGRCTCPSLSQRQCEHGIPRHMACTGDILRDIVVATDKLRAFNAFVQRVRSSLSTERSHAGAVYHGTASVASVASPATASSGMLSAGADSFYRPSVFIGDSTSDLLALLAADVGVVVGRNASLFELCRTAGIAILPLLELHTSCDSAPPPPLRRARASPMPSNGDDGAVTMGPLYAADPAQPWSDIAAALDALGLHCVQWHG* # ORIGINAL: g11589.t1 original gene structure, not modified by PASA NODE_2105_length_7717_cov_39.2209 AUGUSTUS gene 228 1623 . - . ID=g11589;Name=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS mRNA 228 1623 . - . ID=g11589.t1;Parent=g11589;Name=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS exon 1523 1623 . - . ID=g11589.t1.exon1;Parent=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS CDS 1523 1623 . - 0 ID=cds.g11589.t1;Parent=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS exon 1340 1392 . - . ID=g11589.t1.exon2;Parent=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS CDS 1340 1392 . - 1 ID=cds.g11589.t1;Parent=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS exon 228 801 . - . ID=g11589.t1.exon3;Parent=g11589.t1 NODE_2105_length_7717_cov_39.2209 AUGUSTUS CDS 228 801 . - 2 ID=cds.g11589.t1;Parent=g11589.t1 #PROT g11589.t1 g11589 MSGRQAVRMETRIRANQESRGQGQSRTVEVVRKWEKRWTDLGHMKVFKWIPVEGTKAASTKDADNKEETEENGGIIDVDNEPPSAVDTPNAGTGEGDGRSAPGERTHGATGAFATDTPASEASAAASPATTAQTDAPTDAQTTRNPSEFASPSITPSVAGPLSPSQSTTVALGDGQRSAEDAVAAEVGSVDVAQENKDASSTADAVVVSGIPPTPVDHYASSQGLKRGRDDFIDADDGDGDD # PASA_UPDATE: g11590.t1, single gene model update, valid-1, status:[pasa:asmbl_3529,status:3], valid-1 NODE_2105_length_7717_cov_39.2209 . gene 2529 4186 . + . ID=g11590;Name=g11590.t1 NODE_2105_length_7717_cov_39.2209 . mRNA 2529 4186 . + . ID=g11590.t1;Parent=g11590;Name=g11590.t1 NODE_2105_length_7717_cov_39.2209 . five_prime_UTR 2529 2745 . + . ID=g11590.t1.utr5p1;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . exon 2529 3042 . + . ID=g11590.t1.exon1;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . CDS 2746 3042 . + 0 ID=cds.g11590.t1;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . exon 3344 3442 . + . ID=g11590.t1.exon2;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . CDS 3344 3442 . + 0 ID=cds.g11590.t1;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . exon 4022 4186 . + . ID=g11590.t1.exon3;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . CDS 4022 4156 . + 0 ID=cds.g11590.t1;Parent=g11590.t1 NODE_2105_length_7717_cov_39.2209 . three_prime_UTR 4157 4186 . + . ID=g11590.t1.utr3p1;Parent=g11590.t1 #PROT g11590.t1 g11590 MDADGGQPHIRCAILDDKVRCERPATNNMLSNRVLKELANGKLKIALDSDAGHSRICQQHKMQISAQRKKDKPAAPNPPTGTTKGSKQQAQGTESADLEVDLNSLQVNALKRYKRHYKLATRHNMNKPDLVQAVMKHFKSQAVVENDFLTNFIEIVKSEKNKLDKNPALQNGGADD* # PASA_UPDATE: g11591.t1, single gene model update, valid-1, status:[pasa:asmbl_3530,status:12], valid-1 NODE_2105_length_7717_cov_39.2209 . gene 4428 7628 . - . ID=g11591;Name=g11591.t1 NODE_2105_length_7717_cov_39.2209 . mRNA 4428 7628 . - . ID=g11591.t1;Parent=g11591;Name=g11591.t1 NODE_2105_length_7717_cov_39.2209 . five_prime_UTR 7587 7628 . - . ID=g11591.t1.utr5p1;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . exon 5805 7628 . - . ID=g11591.t1.exon1;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . CDS 5805 7586 . - 0 ID=cds.g11591.t1;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . exon 5433 5578 . - . ID=g11591.t1.exon2;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . CDS 5433 5578 . - 0 ID=cds.g11591.t1;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . exon 4428 4938 . - . ID=g11591.t1.exon3;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . CDS 4914 4938 . - 1 ID=cds.g11591.t1;Parent=g11591.t1 NODE_2105_length_7717_cov_39.2209 . three_prime_UTR 4428 4913 . - . ID=g11591.t1.utr3p1;Parent=g11591.t1 #PROT g11591.t1 g11591 MPNLATDCLQFCANHIGEIIRLPLNLDCIHDKLLAQLVRILTPAQFEAIEDKKDRILSRLYMHRLEVLCNSSPVALGLFRCGACFKVLTPVTRSSSPCTGDRASVGYSGAVIHTHVRDTSFDVNTFVASLRLRGLTWPDVYWRTWGLVTHADCSACGGVFPYADFRRCVYHPQVATYSSASGGGTANALGSYPCCGRAAVRFDPSGGAGGCSSRDHTPVLETYAQRESHETFLKHAMAIAPNDAGVEASPSSVAAAESHCVHQQDSGRSRGAGGVPAASSRINVFTAEELASGVPMPVVDSLRKPTRGSRAVGSKSSSSSSRGLRSSAQQSVAFADELGLRGRRARLVDRSTSGLAHRNMAGGGEEDEDDGIVDDTDSSDERSSDDEEVAGGSLSGGRNAWRSNASIARPKSRVSATAATASRPLQRRPSSLLSGRSTGASRQSLSSSASQGQGLASSSSSAVAGGGSSGNERHREDANSNNNNNNNNSSSNPSGGVDVTDRDDGGIASGGAGAHSASGAASMDMLTDGGGTDGGSDDDQRAPVSVDETTRARRFTVEQQRKEDYQRMLEMTAALSGLRPPTVSGSARDKESAKQENIGLYYSAESRYRARWAAARQAQPGDRPGVTAMQSSGSASAPLSSQGGSLKSRR* # ORIGINAL: g13477.t1 original gene structure, not modified by PASA NODE_1988_length_8189_cov_36.9511 AUGUSTUS gene 6344 8103 . - . ID=g13477;Name=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS mRNA 6344 8103 . - . ID=g13477.t1;Parent=g13477;Name=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS exon 8052 8103 . - . ID=g13477.t1.exon1;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS CDS 8052 8103 . - 0 ID=cds.g13477.t1;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS exon 7540 7682 . - . ID=g13477.t1.exon2;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS CDS 7540 7682 . - 2 ID=cds.g13477.t1;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS exon 7142 7272 . - . ID=g13477.t1.exon3;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS CDS 7142 7272 . - 0 ID=cds.g13477.t1;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS exon 6758 6826 . - . ID=g13477.t1.exon4;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS CDS 6758 6826 . - 1 ID=cds.g13477.t1;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS exon 6344 6524 . - . ID=g13477.t1.exon5;Parent=g13477.t1 NODE_1988_length_8189_cov_36.9511 AUGUSTUS CDS 6344 6524 . - 1 ID=cds.g13477.t1;Parent=g13477.t1 #PROT g13477.t1 g13477 MKRKCETIFNFYAGTTGDAQRELGLAKASQLPQIVAGDKEMLAAEIERLDTNREAYLRQSQERLQIALKCIAVMDTTIREHRLGFQPEFDDASAKFISAKCDAMCLKLSVIKHQIIKDTYTPDAVVALKKIRGHLDDAHKRAGSENASAAAAIAAYESIGMGFGGLVREYATLLEEIENRRWALSELSRDV* # PASA_UPDATE: g13476.t1, single gene model update, valid-1, status:[pasa:asmbl_3166,status:3], valid-1 NODE_1988_length_8189_cov_36.9511 . gene 3331 5409 . - . ID=g13476;Name=g13476.t1 NODE_1988_length_8189_cov_36.9511 . mRNA 3331 5409 . - . ID=g13476.t1;Parent=g13476;Name=g13476.t1 NODE_1988_length_8189_cov_36.9511 . five_prime_UTR 5266 5409 . - . ID=g13476.t1.utr5p1;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . exon 4230 5409 . - . ID=g13476.t1.exon1;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . CDS 4230 5265 . - 0 ID=cds.g13476.t1;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . exon 3938 4041 . - . ID=g13476.t1.exon2;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . CDS 3938 4041 . - 2 ID=cds.g13476.t1;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . exon 3331 3660 . - . ID=g13476.t1.exon3;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . CDS 3535 3660 . - 0 ID=cds.g13476.t1;Parent=g13476.t1 NODE_1988_length_8189_cov_36.9511 . three_prime_UTR 3331 3534 . - . ID=g13476.t1.utr3p1;Parent=g13476.t1 #PROT g13476.t1 g13476 MCTVHPLGIGAANSGRLSRVVVAVLFLVAIVPASFPGADAAAVINGTTATNGTSAVPLPSRDYIIGSFNIQVFGVTKMSKPEVVAALLKILPLYDMLLVMEIRDATNTSIYSLLNQLNNRTAPASRYSILLSDRLGRSSSKEQYAYFYRNRLFTPVLSQTYVFNVTLDYFERPPFVATFDVVNTTSRYTMIGLHSKPEDAVREIDYLVDVYNSHVKRFGQIGALILGDLNAGCTYVAKSKWPSIRLWTDTRFTWYISNDNDTTVSAGVCPYDRLISAGNVTTSIVPWSAVIYRFDQIFNLTIDAAKDVSDHYNIWVRVRFGSTFLPWGVSRLESDEGAGPSSNQNLNKALVAGGASIGGVLVACAIGYAVWHKKTGSDRMMLGGASECKSGADAGMAMTMVSNPFYQAVSITDANSVCDER* # PASA_UPDATE: g13475.t1, single gene model update, valid-1, status:[pasa:asmbl_3165,status:12], valid-1 NODE_1988_length_8189_cov_36.9511 . gene 76 3068 . - . ID=g13475;Name=g13475.t1 NODE_1988_length_8189_cov_36.9511 . mRNA 76 3068 . - . ID=g13475.t1;Parent=g13475;Name=g13475.t1 NODE_1988_length_8189_cov_36.9511 . five_prime_UTR 2963 3068 . - . ID=g13475.t1.utr5p1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 2875 3068 . - . ID=g13475.t1.exon1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 2875 2962 . - 0 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 2510 2695 . - . ID=g13475.t1.exon2;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 2510 2695 . - 2 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 2199 2273 . - . ID=g13475.t1.exon3;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 2199 2273 . - 2 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 1888 1982 . - . ID=g13475.t1.exon4;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 1888 1982 . - 2 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 1422 1513 . - . ID=g13475.t1.exon5;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 1422 1513 . - 0 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 970 1071 . - . ID=g13475.t1.exon6;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 970 1071 . - 1 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 525 666 . - . ID=g13475.t1.exon7;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 525 666 . - 1 ID=cds.g13475.t1;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . exon 76 254 . - . ID=g13475.t1.exon8;Parent=g13475.t1 NODE_1988_length_8189_cov_36.9511 . CDS 76 254 . - 0 ID=cds.g13475.t1;Parent=g13475.t1;3_prime_partial=true #PROT g13475.t1 g13475 MARNRKRGGHLGLPKSVGNVSSYAIAHLNDNRSQIDAREKVRRINDALHANDMDALRSLAISSRGLINKDLRAVAWPKLLGANVKGAAYYADIVADNEYSRQIKLDVDRSLFRYPKGIRESERRSLRIKLDRIMNGIICTYPHLHYYQGFHDICSVLLIVAGEAAAFAMLEVLCHAHLRDFMGRSLDGATRQLSLLLPLIQCQDPRLADHIMSSGIPPHFALSWVITWYSHVVEDMDTLERLFDVFIASHPLVPIYVAAALVIHRRSDVLAAEAEFSEMHGLLSKMPKSFPAETLIAKAKEFFAAHPPAALLAANQVKG # ORIGINAL: g4443.t1 original gene structure, not modified by PASA NODE_1193_length_13252_cov_52.7216 AUGUSTUS gene 5558 9664 . - . ID=g4443;Name=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS mRNA 5558 9664 . - . ID=g4443.t1;Parent=g4443;Name=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 9183 9664 . - . ID=g4443.t1.exon1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 9183 9664 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 8863 9058 . - . ID=g4443.t1.exon2;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 8863 9058 . - 1 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 8412 8630 . - . ID=g4443.t1.exon3;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 8412 8630 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 7903 8064 . - . ID=g4443.t1.exon4;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 7903 8064 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 7581 7679 . - . ID=g4443.t1.exon5;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 7581 7679 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 7278 7350 . - . ID=g4443.t1.exon6;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 7278 7350 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 6991 7157 . - . ID=g4443.t1.exon7;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 6991 7157 . - 2 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 6654 6723 . - . ID=g4443.t1.exon8;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 6654 6723 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 6144 6317 . - . ID=g4443.t1.exon9;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 6144 6317 . - 2 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 5847 5953 . - . ID=g4443.t1.exon10;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 5847 5953 . - 2 ID=cds.g4443.t1;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS exon 5558 5701 . - . ID=g4443.t1.exon11;Parent=g4443.t1 NODE_1193_length_13252_cov_52.7216 AUGUSTUS CDS 5558 5701 . - 0 ID=cds.g4443.t1;Parent=g4443.t1 #PROT g4443.t1 g4443 MEVTMEKDAAVASLDGQLQQSTAPGAAALIIGTAVAHGAGLSSDSRRVIQEFEYLLERSQQLFHGLRDLPQFGHKQWHTHFGKTFEIYTRLWKFQQQHRSVLDAEYGLRRWEIGEVASKIGQLYYHYYLRTSETNYLQESYIFYDAIRARQYFSKIIEERRPELMIKRLRYYARFIVVCLLLRKEIVVRELMGELKRHVDAYIKTFKPTDGAEWQLVQKEILQFLEADNLITVTAGSGGRVVLSHRLKHEDAAAVGPLQSGHGRRANQGKDGAPAEEPHVELPKLKLQECILVGNSHHQVKFSELTLDMYRTLQALERDVEPALDAVSMDARSTNDLAGIGRGMMQSVAGLDKAGDTDKGRTNPHKYLLYRPTFSQLLSFVSTAFKEMSINSVMLIYLSADGMKPPREFEGPYSLGGVATSRTKRTQLEEGVVTREDNCLHAEDLYMFTRKPLFLIVDSTNSVAFKQFPNLFGQPLVALLSPTDVPSDIDHEKNGNLFTLFLHAPLVAFCLCVGISMVQKATWKKAEMQMRKIYQETTRLLRSVRGVDSSFLRFLDDDFLRQFLCRFSFACCFMNLHSKFRQKPEYLPSSHPPMPMEVTGSRWLEDLVFELASLLDVRSQLTKSDSAESY* # PASA_UPDATE: g4444.t1, single gene model update, valid-1, status:[pasa:asmbl_727,status:12],[pasa:asmbl_728,status:12], valid-1 NODE_1193_length_13252_cov_52.7216 . gene 10354 13077 . + . ID=g4444;Name=g4444.t1 NODE_1193_length_13252_cov_52.7216 . mRNA 10354 13077 . + . ID=g4444.t1;Parent=g4444;Name=g4444.t1 NODE_1193_length_13252_cov_52.7216 . five_prime_UTR 10354 10390 . + . ID=g4444.t1.utr5p1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 10354 10729 . + . ID=g4444.t1.exon1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 10391 10729 . + 0 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 10878 11088 . + . ID=g4444.t1.exon2;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 10878 11088 . + 0 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 11207 11265 . + . ID=g4444.t1.exon3;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 11207 11265 . + 2 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 11425 11686 . + . ID=g4444.t1.exon4;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 11425 11686 . + 0 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 11871 12383 . + . ID=g4444.t1.exon5;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 11871 12383 . + 2 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 12608 12837 . + . ID=g4444.t1.exon6;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 12608 12837 . + 2 ID=cds.g4444.t1;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . exon 12970 13077 . + . ID=g4444.t1.exon7;Parent=g4444.t1 NODE_1193_length_13252_cov_52.7216 . CDS 12970 13077 . + 0 ID=cds.g4444.t1;Parent=g4444.t1 #PROT g4444.t1 g4444 MPGETTKRRLSMRRSGHFAAQDADSSFVDGAWSDNDDEAERKMRRKSLVAENVRREVLESPYKSPFKKGAVDGNAKQPTKAAKGAAPPKAQDTLNAAKLSDLYASCIKLSTENKINQKNSWELSLIDYISDVLDVPMGEMTNFQVASCTLDASVKIYAYRVDSIHSEAYKVLGGLTRSGGKSQDDDDNDGEEKEEGAEKKEKKARTRTVATIESNPDNLLVKRFDLEFDVDPLFQKTQASFDGAGPRGLLLNHLNVHGACELVFDSMDAPSSDVGMAPREDISVDVAPLQSLLYTNGFDPNEARICPQFAGFEFNNWTLGTRSPSRMDAHAHSPVQPANWGDDGGDYYGGDDGAYDSDDMADAFGDSGAAAGDSAAANPFAAAERTLAAQRERLMMREIVATDAAEDDGGAHSASQLASGGHGGDLVFAIASGAAAEYGFFDPSRLKGWAGPSHWKAAPVSADGTAAASKKAGPKAQFTIDFVVPAPDWSTALATGKAATVLAQATLDKATEQSNTLPEDVHYTVDMLTRLFLRPQWVMRFKPRASGEDSEFLLLFSATCRPNLSHFSLSIWA* # PASA_UPDATE: g4441.t1, single gene model update, valid-1, status:[pasa:asmbl_725,status:12], valid-1 NODE_1193_length_13252_cov_52.7216 . gene 1565 2902 . - . ID=g4441;Name=g4441.t1 NODE_1193_length_13252_cov_52.7216 . mRNA 1565 2902 . - . ID=g4441.t1;Parent=g4441;Name=g4441.t1 NODE_1193_length_13252_cov_52.7216 . five_prime_UTR 2869 2902 . - . ID=g4441.t1.utr5p1;Parent=g4441.t1 NODE_1193_length_13252_cov_52.7216 . five_prime_UTR 2435 2455 . - . ID=g4441.t1.utr5p2;Parent=g4441.t1 NODE_1193_length_13252_cov_52.7216 . exon 2869 2902 . - . ID=g4441.t1.exon1;Parent=g4441.t1 NODE_1193_length_13252_cov_52.7216 . exon 1565 2455 . - . ID=g4441.t1.exon2;Parent=g4441.t1 NODE_1193_length_13252_cov_52.7216 . CDS 1820 2434 . - 0 ID=cds.g4441.t1;Parent=g4441.t1 NODE_1193_length_13252_cov_52.7216 . three_prime_UTR 1565 1819 . - . ID=g4441.t1.utr3p1;Parent=g4441.t1 #PROT g4441.t1 g4441 MGAYKYLEELFKKKQSDVLRFLLRVRCWQYRQLAAVHRASRPSRPDKARRLGYKAKQGYVVYRVRLRRGGRKRPVHKGQTYGKPAGHGVNELKWQRSHRSLAEERAGRRCGNLRVLNSYWVAQDATYKFFEVILVDPSHKAIRRDPRINWIVDAVHKKRELRGLTGAGRRNRGIGKGHGYNATIGSSLRAAWKRRNTLSLRRYR* # PASA_UPDATE: g4442.t1, single gene model update, valid-1, status:[pasa:asmbl_726,status:3], valid-1 NODE_1193_length_13252_cov_52.7216 . gene 3321 5348 . + . ID=g4442;Name=g4442.t1 NODE_1193_length_13252_cov_52.7216 . mRNA 3321 5348 . + . ID=g4442.t1;Parent=g4442;Name=g4442.t1 NODE_1193_length_13252_cov_52.7216 . five_prime_UTR 3321 3412 . + . ID=g4442.t1.utr5p1;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . exon 3321 3862 . + . ID=g4442.t1.exon1;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . CDS 3413 3862 . + 0 ID=cds.g4442.t1;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . exon 4006 4898 . + . ID=g4442.t1.exon2;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . CDS 4006 4898 . + 0 ID=cds.g4442.t1;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . exon 5017 5348 . + . ID=g4442.t1.exon3;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . CDS 5017 5185 . + 1 ID=cds.g4442.t1;Parent=g4442.t1 NODE_1193_length_13252_cov_52.7216 . three_prime_UTR 5186 5348 . + . ID=g4442.t1.utr3p1;Parent=g4442.t1 #PROT g4442.t1 g4442 MLSSPSGIRFAAVSRRPTGGSTKAATILIVIPLSFLAFVMLLYLSISDDVQPAPTPFEPKVQGAGEDAPGDHDLNERPRNEDDAAVDELIGDALMDGDVDDLLAARPPPGSRPSVVEAWAVAVADAARKAAENSATEIAQLRMDRDAALSKLHARREDSVGHAGADSGLEQTTIIIQTYNREDTLSELIQHYGSSPRVRDIHIVWNNLQKKPNTNSLMALTETPVHVRISERNSISNRFLPIPELRTQSVLILDDDRKVPYDDLDFAVDVWKRFPEQIVGFEYRSHMFNMFGDAFYVRVKHVGSMVMTGALLFDRKYLAMYTDAPRALLEHVDSVMNCEDILFNFLYANVTAMPPILVASSIEEVESKAFAGLFKRGPTHFMNRDKCLNLFQKAFNNTVPIQEFVHILDRNPDDPSQWRIRRLIAHPSFESATEEESKEKRRRLREIRQSYKNKEKLGFDLEMAKRFVFNFQTTWERIVYTKCRVVGKGNGTAAHPQDTGRKP* # PASA_UPDATE: g10430.t1, single gene model update, valid-1, status:[pasa:asmbl_1361,status:12], valid-1 NODE_1368_length_11732_cov_62.9554 . gene 10415 11728 . - . ID=g10430;Name=g10430.t1 NODE_1368_length_11732_cov_62.9554 . mRNA 10415 11728 . - . ID=g10430.t1;Parent=g10430;Name=g10430.t1 NODE_1368_length_11732_cov_62.9554 . five_prime_UTR 11453 11728 . - . ID=g10430.t1.utr5p1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . exon 11434 11728 . - . ID=g10430.t1.exon1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . CDS 11434 11452 . - 0 ID=cds.g10430.t1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . exon 11178 11330 . - . ID=g10430.t1.exon2;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . CDS 11178 11330 . - 2 ID=cds.g10430.t1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . exon 10837 10910 . - . ID=g10430.t1.exon3;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . CDS 10837 10910 . - 2 ID=cds.g10430.t1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . exon 10415 10537 . - . ID=g10430.t1.exon4;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . CDS 10481 10537 . - 0 ID=cds.g10430.t1;Parent=g10430.t1 NODE_1368_length_11732_cov_62.9554 . three_prime_UTR 10415 10480 . - . ID=g10430.t1.utr3p1;Parent=g10430.t1 #PROT g10430.t1 g10430 MSPSSSGVSLAGASSSGIPAWQRGPLAASGAQRSSVRSPTSDLAAAGDGSEPRGESADGASTRKATDSLSQERNNCDDEQSPEDSLRPTRKDTDDGAVSP* # ORIGINAL: g10427.t1 original gene structure, not modified by PASA NODE_1368_length_11732_cov_62.9554 AUGUSTUS gene 241 3518 . - . ID=g10427;Name=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS mRNA 241 3518 . - . ID=g10427.t1;Parent=g10427;Name=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 3328 3518 . - . ID=g10427.t1.exon1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 3328 3518 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 2956 3061 . - . ID=g10427.t1.exon2;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 2956 3061 . - 1 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 2486 2587 . - . ID=g10427.t1.exon3;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 2486 2587 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 1901 2009 . - . ID=g10427.t1.exon4;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 1901 2009 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 1307 1434 . - . ID=g10427.t1.exon5;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 1307 1434 . - 2 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 1033 1062 . - . ID=g10427.t1.exon6;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 1033 1062 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 670 750 . - . ID=g10427.t1.exon7;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 670 750 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 241 345 . - . ID=g10427.t1.exon8;Parent=g10427.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 241 345 . - 0 ID=cds.g10427.t1;Parent=g10427.t1 #PROT g10427.t1 g10427 MMHAKMMHFDRQPNRMCKITCEQWVDDIIARFVLSQASKITDPDQLYEVHEKIGKGSFGSVYKGINKITKEIVAIKVIDLESAQDEIEVIQQEIAHLSQCDSPFITKYYGSYIKGEALWIVMEYLGGGSALDLLKSGAFEEHHIAIILRETIKALEYMHDQKKIHRDIKAANILFSTVPQVKLGDFGVSGQLSSTLSKRNTFVGTPYWMAPEVIRQSGYDTKADIWSLGITAIEMALAQPPRADIHPMKVLFIIPKDPPPTLEGDFSKPFKEFVALCLQKNPDD # ORIGINAL: g10428.t1 original gene structure, not modified by PASA NODE_1368_length_11732_cov_62.9554 AUGUSTUS gene 4325 5084 . - . ID=g10428;Name=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS mRNA 4325 5084 . - . ID=g10428.t1;Parent=g10428;Name=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 4925 5084 . - . ID=g10428.t1.exon1;Parent=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 4925 5084 . - 0 ID=cds.g10428.t1;Parent=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 4659 4761 . - . ID=g10428.t1.exon2;Parent=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 4659 4761 . - 2 ID=cds.g10428.t1;Parent=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS exon 4325 4427 . - . ID=g10428.t1.exon3;Parent=g10428.t1 NODE_1368_length_11732_cov_62.9554 AUGUSTUS CDS 4325 4427 . - 1 ID=cds.g10428.t1;Parent=g10428.t1 #PROT g10428.t1 g10428 MAQQIDSTPANADPSGASEKVFDQEGVLGDVVNSVFTAGVNPGVVSFLNYTFAGLFLSLAFLLFWWGVNFHILFMIFCSVGLFASVQWFLANLPEPQQSQPQAQQQPATNTKEDAPSKKKK* # PASA_UPDATE: g10429.t1, single gene model update, valid-1, status:[pasa:asmbl_1359,status:3], valid-1 NODE_1368_length_11732_cov_62.9554 . gene 5492 9915 . + . ID=g10429;Name=g10429.t1 NODE_1368_length_11732_cov_62.9554 . mRNA 5492 9915 . + . ID=g10429.t1;Parent=g10429;Name=g10429.t1 NODE_1368_length_11732_cov_62.9554 . five_prime_UTR 5492 5778 . + . ID=g10429.t1.utr5p1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 5492 5847 . + . ID=g10429.t1.exon1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 5779 5847 . + 0 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 5967 6030 . + . ID=g10429.t1.exon2;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 5967 6030 . + 0 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 6122 6191 . + . ID=g10429.t1.exon3;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 6122 6191 . + 2 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 6420 6681 . + . ID=g10429.t1.exon4;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 6420 6681 . + 1 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 6938 8253 . + . ID=g10429.t1.exon5;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 6938 8253 . + 0 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . exon 8439 9915 . + . ID=g10429.t1.exon6;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . CDS 8439 9747 . + 1 ID=cds.g10429.t1;Parent=g10429.t1 NODE_1368_length_11732_cov_62.9554 . three_prime_UTR 9748 9915 . + . ID=g10429.t1.utr3p1;Parent=g10429.t1 #PROT g10429.t1 g10429 MPVDYDDRLHFDVTLIGEPSRPSLRTASGADVSASAASAGFRRDEDDIKIQSFQRSERESEILRSFANNGGARRLQEYREIPRPPSASGGQGTGDSASMQSGLAKLDAIQQRLDELQSDYVRRQEELMRRQEMARMEQTATAMDRLRDLHERQMDWQEQQLNALEGMLSRSQTSHPRLYPSVRQNASGASTSKPKKKKKSASPTKKANLGSVSGVGTDSHSGATADAATYFSPQTNFRRPDSRLSVTGRSIGLRDEYIADQYPIDLAPPPPQPAPLVSRTDATTETADASVVVRTEENEKERVEDASPLDRYLTSGRSTEASAGGKFIVGAGDNAYSRVADVMAAARRMREQLDRDSASGAGSAVQDYSSHRQPRGGGIGGVAGGSTRTDAHGSVRPVRVFGMQDGQDGYDVLMQRVVGSGTSLDPRMDESRVRHEVTRRIAAALASRDGDGGDGGGAGAAAESPERAGIGRPSSDPYGYPRVAHEQRPPSPTSGTRTGAQWGQEGYDGIYLTHLYGRPFHYPRRVTNKPHAMRYVSTPAPAPGVIRRPATVESSSLLPPRVLKVVSQPKPPRPDLRVVHVVSEQRNPLVAEKNATVDIPPAVPQPPQFIDTVVVEDEPVDYPPRAPTPPIPPAARKEPSDVPVDWVRSEVLAGLLGEIGSRLPPHPQPRVRTPTPPESPQEGIDPADIAAMVRDSLAALLAARARDRPKTPPPPKPVSPPRVSPPRRPRTPSPPRMPSPPPKARHASPPPPPSRPDRHELPVRDARRDTPPPGDVAADLPARDFASAMPRPSIDAHGGDAYSPGASPIVRRQQMVERAASPRTPTAPSVAPQSPATPASADTSSIPTTSVFTDNFISEGELLGDGYSDGEFHPRVPKGRQRRGSGSDTDEEFPGYDLSEMEVPLPHRMGAAGVLSPGEPVDFDRPVRLPYVAPTARRSIPKGRPGVLSDMSESAGEVHSLSPSDSDVTAGDASAGDIRGRQGPPYPHHTKILRPSTRQKAASAMAMAYDALETDESDGGNGSGSYGEV* # ORIGINAL: g12847.t1 original gene structure, not modified by PASA NODE_4079_length_2216_cov_30.9794 AUGUSTUS gene 181 2065 . + . ID=g12847;Name=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS mRNA 181 2065 . + . ID=g12847.t1;Parent=g12847;Name=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS exon 181 309 . + . ID=g12847.t1.exon1;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS CDS 181 309 . + 0 ID=cds.g12847.t1;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS exon 716 889 . + . ID=g12847.t1.exon2;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS CDS 716 889 . + 0 ID=cds.g12847.t1;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS exon 1139 1221 . + . ID=g12847.t1.exon3;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS CDS 1139 1221 . + 0 ID=cds.g12847.t1;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS exon 1457 1582 . + . ID=g12847.t1.exon4;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS CDS 1457 1582 . + 1 ID=cds.g12847.t1;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS exon 1885 2065 . + . ID=g12847.t1.exon5;Parent=g12847.t1 NODE_4079_length_2216_cov_30.9794 AUGUSTUS CDS 1885 2065 . + 1 ID=cds.g12847.t1;Parent=g12847.t1 #PROT g12847.t1 g12847 VTGEFAGNNFFLDRSSIGMSRAKRVTELLQELNGDVRGSFMEMSVSQILESNRDFFSQFTVVIGSQLTEATFRRLAEHLWAINVPLLLVRSYGQIGYMRLQVAEHTVVESHPDSTIDDLRLDAPFSEMIQYCDSLDLESMSQHEHSHVPFLAILFKKINEWKRAHGGLVPKTAAEKDEFRQKYIRESVRTNPDGIPLHEENFDEAAAHAHLVCACLALCSVRAGVTVAFG* # PASA_UPDATE: g3835.t1, single gene model update, valid-1, status:[pasa:asmbl_3261,status:3], valid-1 NODE_2007_length_8126_cov_40.1186 . gene 1 3198 . + . ID=g3835;Name=g3835.t1 NODE_2007_length_8126_cov_40.1186 . mRNA 1 3198 . + . ID=g3835.t1;Parent=g3835;Name=g3835.t1 NODE_2007_length_8126_cov_40.1186 . five_prime_UTR 1 62 . + . ID=g3835.t1.utr5p1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 1 210 . + . ID=g3835.t1.exon1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 63 210 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 315 406 . + . ID=g3835.t1.exon2;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 315 406 . + 2 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 507 613 . + . ID=g3835.t1.exon3;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 507 613 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 775 893 . + . ID=g3835.t1.exon4;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 775 893 . + 1 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 1141 1205 . + . ID=g3835.t1.exon5;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 1141 1205 . + 2 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 1412 1507 . + . ID=g3835.t1.exon6;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 1412 1507 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 1688 1813 . + . ID=g3835.t1.exon7;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 1688 1813 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 1977 2117 . + . ID=g3835.t1.exon8;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 1977 2117 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 2251 2356 . + . ID=g3835.t1.exon9;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 2251 2356 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 2570 2757 . + . ID=g3835.t1.exon10;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 2570 2757 . + 2 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . exon 2914 3198 . + . ID=g3835.t1.exon11;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . CDS 2914 3033 . + 0 ID=cds.g3835.t1;Parent=g3835.t1 NODE_2007_length_8126_cov_40.1186 . three_prime_UTR 3034 3198 . + . ID=g3835.t1.utr3p1;Parent=g3835.t1 #PROT g3835.t1 g3835 MADVGDEKSVQVQFVTKQTEYAVTDKPITVPLRLKRYGLSEVVNHLLGRASDPVPFDILVNGEFLRTSLETYIEQNEFSRESILALEYVEATAPPSEPVNLKHDDWVSAVAAGLYGQFLSGSYDKIVRGWTEQSGCFFAAEGHDAPVKAVAWVTENADGRNSVCISGSQDHTLRTWKVSTNSAKPTPLSILKGHSASVDAIAVDPSGSRVASGSFDKTIILWDPTETDAADEAPAAKRQRLLSNQHKISTKTPLGTLAGHAGAVSSLAWPSPSLLLSGGWDNTVRQWDVESGINVATTSAPSSVLGLSHSTALGLTATGHTDSTIRIWDPRIKDGSVVQMALSSHKGWVSSVAWSPASNAQQQQLVSSGYDGTLRLWDIRSRTPLFTDSSRGKDVKILCVDWSVAGIILSGGDDSVLSMAAVGRSVGVSKTTSTH* # ORIGINAL: g3836.t1 original gene structure, not modified by PASA NODE_2007_length_8126_cov_40.1186 AUGUSTUS gene 3986 8049 . - . ID=g3836;Name=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS mRNA 3986 8049 . - . ID=g3836.t1;Parent=g3836;Name=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 7796 8049 . - . ID=g3836.t1.exon1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 7796 8049 . - 0 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 7275 7557 . - . ID=g3836.t1.exon2;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 7275 7557 . - 1 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 6932 7123 . - . ID=g3836.t1.exon3;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 6932 7123 . - 0 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 6338 6482 . - . ID=g3836.t1.exon4;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 6338 6482 . - 0 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 6001 6105 . - . ID=g3836.t1.exon5;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 6001 6105 . - 2 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 4340 5833 . - . ID=g3836.t1.exon6;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 4340 5833 . - 2 ID=cds.g3836.t1;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS exon 3986 4089 . - . ID=g3836.t1.exon7;Parent=g3836.t1 NODE_2007_length_8126_cov_40.1186 AUGUSTUS CDS 3986 4089 . - 2 ID=cds.g3836.t1;Parent=g3836.t1 #PROT g3836.t1 g3836 SVIEYDIYPHAGIFFSELTRHGVTVEAKATVRAGENDYAAAVNVIKKSGSRAILSNVFDSSDYPDATSLYKAAIAGGIMGPGYTWLIGGSANSFVNAAGNDGTLTPSELMKFNGSITVQVGLGVGNRPLRRKIIDLWNSRPLSWIGDDELVDPLPATAYDNDTENPDTLVPDVSAAVDGLYTLVWAFHKLAYVDRVHVTPEVLLQQLFEARFDGVTGDVVYDPNGDRLGTSIFASIHYMPAEERIKSIVIGTASYDRDRNPTLDWSASGFTGPTSTGSIWWSTGVGKRPSAFVCPRGCVNGDCIASDKCRCYAGWANLGTGADCTKAVCASCDQGDCTSPGVCQCKTGWVGSSCSISIAKSGDSMITIYVAVPIACVSALLIVVAVASFVYARRMAKLAAVHAAPPNLDLEGPIAKALAVIAKIGAKKLEGAALAVELDAVRQALLSDNMYQPVLDASTVHDNIGLESVQFLDELMLTRLMPKRSRMHKANRRMSMRDPSVTSYRDNTSVGGSNDGLAVTSTAAQELKGVSSALSGIHRWDYDIFALEGATNGQPLCALSFEVMWKLGLIDAFGIDQSLLKRFLVAMEAGYHHHGAVYHTSTHAADVLQAMFVFLNMEKFASSFSPLEILAACLACIGHDLDHPGVTNNFLIATGHELAVLYNDTSVLESHHSASLFRILGDPDANVLRVLNNADVKALRRLVCTLILSTDVAHHFEHVAKFNARVASGQLSAESDSDRQLLLIMAIKAADVSNPTKRKVIYDGWTERIMEEFFRQGDREKELGLPVSMFMDRHNTNIAKCQNGFIEVIVSPLVKSFTDFIEFPEPKANLQQNHTYWRTRLDAAPPLISALAVADQPV* # ORIGINAL: g8698.t1 original gene structure, not modified by PASA NODE_3117_length_4261_cov_34.2796 AUGUSTUS gene 487 4154 . + . ID=g8698;Name=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS mRNA 487 4154 . + . ID=g8698.t1;Parent=g8698;Name=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 487 567 . + . ID=g8698.t1.exon1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 487 567 . + 1 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 846 951 . + . ID=g8698.t1.exon2;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 846 951 . + 1 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 1351 1549 . + . ID=g8698.t1.exon3;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 1351 1549 . + 0 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 1793 1883 . + . ID=g8698.t1.exon4;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 1793 1883 . + 2 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 2165 2538 . + . ID=g8698.t1.exon5;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 2165 2538 . + 1 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 2742 2941 . + . ID=g8698.t1.exon6;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 2742 2941 . + 2 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 3313 3669 . + . ID=g8698.t1.exon7;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 3313 3669 . + 0 ID=cds.g8698.t1;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS exon 3822 4154 . + . ID=g8698.t1.exon8;Parent=g8698.t1 NODE_3117_length_4261_cov_34.2796 AUGUSTUS CDS 3822 4154 . + 0 ID=cds.g8698.t1;Parent=g8698.t1 #PROT g8698.t1 g8698 LMTGSFDRVVKIWSPDGNLIQKLDGFSDTILDIVYVPPTQTMWVTCSNISHPVVYDPRTGANVSDFIGTFNADQGEGTTHLRQFRFVPETCEVLAVTNRRSLVVYKYNPFASITTLHGHEDVAEALTYTSKTPLLIFTGGADGIIFKWERVQLNNFMYSPESFVCGEEVRVRAEKSPSPSPSGSPTPRLRALNQRRKKLHIDKDHDSDEDWALSPSPSRRAHSPPKTEPTTKRGPNGDAAEDDDDVKKGAKDDFQHSTRTAILACIYYEELDVLIVASEDHKIYVWGYDESSIRAIKEVIADVSADVGASNVASKFEFLLKREETAASIDAATPQRQTAPASGREKSRLAAGSRPKSSLIDLPTVSDVPEILVDADGIITGTGPHGGGGSGGSMLAPATSTPSQLGASGSVSRNSPGLGGPAPPPHEEMVSNRVAGLSCKFALADHKDSVTAMATVDFVEEDGTRRHYLLSTSCDRRICLWDLIRGTLVDVFRNVENGMGREELAADGSILDLCYSKDLKMFAYASSDRLAYVRRFATHGTDMRLEYVLQGHDAEVLQVKWNAVHRQWITGSEDRTMRIW # PASA_UPDATE: g6485.t1, single gene model update, valid-1, status:[pasa:asmbl_5939,status:3], valid-1 NODE_3365_length_3613_cov_34.5964 . gene 725 2975 . - . ID=g6485;Name=g6485.t1 NODE_3365_length_3613_cov_34.5964 . mRNA 725 2975 . - . ID=g6485.t1;Parent=g6485;Name=g6485.t1 NODE_3365_length_3613_cov_34.5964 . five_prime_UTR 2814 2975 . - . ID=g6485.t1.utr5p1;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . exon 2592 2975 . - . ID=g6485.t1.exon1;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . CDS 2592 2813 . - 0 ID=cds.g6485.t1;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . exon 1886 2104 . - . ID=g6485.t1.exon2;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . CDS 1886 2104 . - 0 ID=cds.g6485.t1;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . exon 725 1581 . - . ID=g6485.t1.exon3;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . CDS 1369 1581 . - 0 ID=cds.g6485.t1;Parent=g6485.t1 NODE_3365_length_3613_cov_34.5964 . three_prime_UTR 725 1368 . - . ID=g6485.t1.utr3p1;Parent=g6485.t1 #PROT g6485.t1 g6485 MTDAILHARDYTNAVKIIAHAPVSHKYLCCIRLANCGNIFSWCGGCVDLHKRTYMTVYENKVEYNVPSMICCCYYDNVATLYLDRGIVSRVGRAGFCAPACTHCSCFPTCCDLCGEGVVFYGSQCGSCKTAYECYYGGMAGCCHWFMFCGLDSADAVIAAVTAQWAVAVSRKAAPTQQLMMPSQQQQTTVVIQQPMYNQGYAPSQGAYPPAPGPYPQ* # PASA_UPDATE: g10353.t1, single gene model update, valid-1, status:[pasa:asmbl_3616,status:12],[pasa:asmbl_3618,status:12], valid-1 NODE_2145_length_7519_cov_39.1535 . gene 2701 5349 . - . ID=g10353;Name=g10353.t1 NODE_2145_length_7519_cov_39.1535 . mRNA 2701 5349 . - . ID=g10353.t1;Parent=g10353;Name=g10353.t1 NODE_2145_length_7519_cov_39.1535 . five_prime_UTR 5141 5349 . - . ID=g10353.t1.utr5p1;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . exon 4930 5349 . - . ID=g10353.t1.exon1;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . CDS 4930 5140 . - 0 ID=cds.g10353.t1;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . exon 4041 4661 . - . ID=g10353.t1.exon2;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . CDS 4041 4661 . - 2 ID=cds.g10353.t1;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . exon 2701 3829 . - . ID=g10353.t1.exon3;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . CDS 2817 3829 . - 2 ID=cds.g10353.t1;Parent=g10353.t1 NODE_2145_length_7519_cov_39.1535 . three_prime_UTR 2701 2816 . - . ID=g10353.t1.utr3p1;Parent=g10353.t1 #PROT g10353.t1 g10353 MHSALTLNVMGPIVALFVLSCLSSHSVAVAQPTSAPTFTTLFADPLDNRANTKLIAANWTIVPVIDGVTLLPLPTVRNQSACAIGGIVSAYINKREERAVVILSYDFVPTPFIEAYISAVATADADNPKLSQNQLVLAGCRGSDDKNKPFDCPLSVRNINDKDSIPGSSSQTVTLSPNRTYTLTATIAISSSFVTVSLVEKTSGSVVASANATLPDALIVRTFGAAMVDKQGGGFCVSNFSYKGGADAASAQILFADTFADGKGAEFWTAFDMSTIGRPVPRLTAEGACAPNAAAVVERVVLPLSSHNATVRIGFEFNGHNATKDTAIYVQLVGKTSNGDPIVLRAGCQIQNDIVDGLPANCGPTIYIGDDCANSPYLRGASVRLPTDKSSRISLEVGGGRARLSIFDSLNSQIVKLETQGWEKVFAQTDFTLAAFTIETESKPPVDTCVRNFIAESSASVLFNADNIEWPKGCNYNNNNNNNNNNNNTGNNNNNNNNNNNNNNNNNGTGNNSTNACLGSYLTLVDTQAGRIVMCSKQSVGTVVVPTCVWSAGATNKWSPLADLLDNAAPHADHVVNGANNSQFGVVKKGLLYRASQAAAWQLQALWDCKQCGL* # PASA_UPDATE: g10352.t1, single gene model update, valid-1, status:[pasa:asmbl_3617,status:12], valid-1 NODE_2145_length_7519_cov_39.1535 . gene 49 2172 . + . ID=g10352;Name=g10352.t1 NODE_2145_length_7519_cov_39.1535 . mRNA 49 2172 . + . ID=g10352.t1;Parent=g10352;Name=g10352.t1 NODE_2145_length_7519_cov_39.1535 . exon 49 207 . + . ID=g10352.t1.exon1;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . CDS 49 207 . + 0 ID=cds.g10352.t1;Parent=g10352.t1;5_prime_partial=true NODE_2145_length_7519_cov_39.1535 . exon 409 506 . + . ID=g10352.t1.exon2;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . CDS 409 506 . + 0 ID=cds.g10352.t1;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . exon 767 844 . + . ID=g10352.t1.exon3;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . CDS 767 844 . + 1 ID=cds.g10352.t1;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . exon 1121 2172 . + . ID=g10352.t1.exon4;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . CDS 1121 1910 . + 1 ID=cds.g10352.t1;Parent=g10352.t1 NODE_2145_length_7519_cov_39.1535 . three_prime_UTR 1911 2172 . + . ID=g10352.t1.utr3p1;Parent=g10352.t1 #PROT g10352.t1 g10352 VLTDDELRRLLTLSRTLGMEPLVEITDADEMRRALAAGSKVIGVNNRNLHDFKVDMTRTEAVAGLAPEDTILAALSGISVRADVVRYANVGAKAVLVGEALMRARDPGRFARYLLGTSAPADTLVKVCGVRDVESARVAALAGADMIGLIFASSRRKVDNVTAKAIVDAVASLRKAKVEPWKAPDASVVCGAAWHVTCADHLVRAVHYTGPLVVGVFSDQSAEEIDAVVRETGIDIVQLHGSAEADDMSKHVPGRPTIRAVHVGESDSSESVKARIARSVGNDALILLDTKVGVGMQGGSGVVFDWAIARDVVVGEAGGARFPVLLAGGLSPDNVKGVLGAVDVAGVDVSSGVETDGVKDHAKIRAFVQAVRNY* # ORIGINAL: g10749.t1 original gene structure, not modified by PASA NODE_4405_length_1665_cov_36.7893 AUGUSTUS gene 203 1562 . + . ID=g10749;Name=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS mRNA 203 1562 . + . ID=g10749.t1;Parent=g10749;Name=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS exon 203 498 . + . ID=g10749.t1.exon1;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS CDS 203 498 . + 0 ID=cds.g10749.t1;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS exon 681 778 . + . ID=g10749.t1.exon2;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS CDS 681 778 . + 1 ID=cds.g10749.t1;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS exon 938 1101 . + . ID=g10749.t1.exon3;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS CDS 938 1101 . + 2 ID=cds.g10749.t1;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS exon 1254 1562 . + . ID=g10749.t1.exon4;Parent=g10749.t1 NODE_4405_length_1665_cov_36.7893 AUGUSTUS CDS 1254 1562 . + 0 ID=cds.g10749.t1;Parent=g10749.t1 #PROT g10749.t1 g10749 RTIFQVNNRYRADNMISKDVIRKVLFVQKDRKYVSVARDGVCCVWKSDLSHVLHTFYIGSHKSPQVTAQTSLTQNTSWITDAIFLPNLNKMLVSFDDRQLSFYDSVTADSRVHQLRMKPFEQVPLCLAYVPDTDNNLDRNVLLFGDDGGYVNIITLPDKSSFNSLPKDIDPHALADHGMPDFTYVRRKVHRDWVLGIKYFPTLKSYVSCSSSNQRSLVIGDLESRSERVLNVYRGVNAFDLSRRPNFLVTGGFDHVVRLWNPYILSKPAALLTGHNATIVEVAVNEDGQ # ORIGINAL: g495.t1 original gene structure, not modified by PASA NODE_2230_length_7141_cov_41.8698 AUGUSTUS gene 3604 7019 . + . ID=g495;Name=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS mRNA 3604 7019 . + . ID=g495.t1;Parent=g495;Name=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 3604 4014 . + . ID=g495.t1.exon1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 3604 4014 . + 0 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 4171 4332 . + . ID=g495.t1.exon2;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 4171 4332 . + 0 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 4622 4722 . + . ID=g495.t1.exon3;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 4622 4722 . + 0 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 5170 5380 . + . ID=g495.t1.exon4;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 5170 5380 . + 1 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 5667 6048 . + . ID=g495.t1.exon5;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 5667 6048 . + 0 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 6598 6739 . + . ID=g495.t1.exon6;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 6598 6739 . + 2 ID=cds.g495.t1;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS exon 6980 7019 . + . ID=g495.t1.exon7;Parent=g495.t1 NODE_2230_length_7141_cov_41.8698 AUGUSTUS CDS 6980 7019 . + 1 ID=cds.g495.t1;Parent=g495.t1 #PROT g495.t1 g495 MGTVLSDLRGAVGTPAKTQPVRAISRNGQKSSSVKTTIKKSPSGTTVTTTTTTTTTATLTTAPRRASVVIGGSHDVSSERAGPTSSRNEIDRKSSEDGARGISSSVIVAPIGESLTCFDYLAGHDLIFYSITGGNVKVVSGTTGKIVHSLVCSEDIFALKALDSVRICVGHSNGTARVIDVTTAAVCITLKGHTDMVDCIAHRNGIVFTGSWDATVRSFDVVNDRSRRIFRGHGGYVQSLIVFGCDGRLLASGSTDHTVRVWKCDTAECAHVIACPSAVTSLSIGRPFMGVHDNIKKEIMCIGGQNGSVLAASVDENGHFSPASPLSRSSDHLDPLDDGTQHAEGVMGHVDGSDSCDLVSFPVPDVLLFDSKDGPAMFTTVDKPSVAQVACIPLVDDELARSECVVLVAAGERVHVLLHRFDEDSTATVTLVRTVRAHDASMLAIAPCSDGESVLTVADDGCIKRWLYGRKGSPGLRGVATG* # PASA_UPDATE: g494.t1, single gene model update, valid-1, status:[pasa:asmbl_3837,status:12],[pasa:asmbl_3838,status:12], valid-1 NODE_2230_length_7141_cov_41.8698 . gene 168 2556 . - . ID=g494;Name=g494.t1 NODE_2230_length_7141_cov_41.8698 . mRNA 168 2556 . - . ID=g494.t1;Parent=g494;Name=g494.t1 NODE_2230_length_7141_cov_41.8698 . five_prime_UTR 2034 2556 . - . ID=g494.t1.utr5p1;Parent=g494.t1 NODE_2230_length_7141_cov_41.8698 . exon 594 2556 . - . ID=g494.t1.exon1;Parent=g494.t1 NODE_2230_length_7141_cov_41.8698 . CDS 594 2033 . - 0 ID=cds.g494.t1;Parent=g494.t1 NODE_2230_length_7141_cov_41.8698 . exon 168 353 . - . ID=g494.t1.exon2;Parent=g494.t1 NODE_2230_length_7141_cov_41.8698 . CDS 168 353 . - 0 ID=cds.g494.t1;Parent=g494.t1;3_prime_partial=true #PROT g494.t1 g494 MGFSAIRGDETPASPLWQTSVLPHPPSAGRPGNGRRMSVSGAMMGNGASLSSSYGAQQAGALRSSPQQSPQQNSYIQQAGSGSSQYIAHQQLQQQQQQQQQQQQQQQQQQHPQYVFGRGDRGVLGIQPHDGAASGGTTSMRVPMSRPLTRQSIASLSAEQQQYLQKFAAQQQQTPDVPASPMGHGINGPDFSQSEQQHRHQQQQQQHEVSAGIQRPRTGGRRGSTSMGIQHEAVRESEAVYAINIGGGGGSTNQDRSATLRRSFAYHEGDQKLSGQSDDSELMSGPATPTTISPTVTTQSSRVNVRPAAPKSAGRARRGSNSTAAETLANGFGMAVLGQTKPISADTAVPKRPASSLGSRDRDREREKEREKEKEKEREKEKEKEREKEKEKLPDRSSAATMQQRQSSTDSGNVTSSDNSLNKDVNAAAQKGRNSRGGLSREGSVAAVDESSDYSEDGFVDLGHFTGLRKVGDESKKMKQEVLGSIGEISDVVQSHIRSLNASSNGLGNLPSPGVGLKNRGLGSRQGSLVKLLQPRRQDSTQ # PASA_UPDATE: g9549.t1, single gene model update, valid-1, status:[pasa:asmbl_1545,status:3], valid-1 NODE_1421_length_11449_cov_42.1208 . gene 744 5122 . - . ID=g9549;Name=g9549.t1 NODE_1421_length_11449_cov_42.1208 . mRNA 744 5122 . - . ID=g9549.t1;Parent=g9549;Name=g9549.t1 NODE_1421_length_11449_cov_42.1208 . five_prime_UTR 4902 5122 . - . ID=g9549.t1.utr5p1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 4368 5122 . - . ID=g9549.t1.exon1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 4368 4901 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 3890 4195 . - . ID=g9549.t1.exon2;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 3890 4195 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 2994 3629 . - . ID=g9549.t1.exon3;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 2994 3629 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 2430 2873 . - . ID=g9549.t1.exon4;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 2430 2873 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 1977 2081 . - . ID=g9549.t1.exon5;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 1977 2081 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 1207 1701 . - . ID=g9549.t1.exon6;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 1207 1701 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . exon 744 1018 . - . ID=g9549.t1.exon7;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . CDS 857 1018 . - 0 ID=cds.g9549.t1;Parent=g9549.t1 NODE_1421_length_11449_cov_42.1208 . three_prime_UTR 744 856 . - . ID=g9549.t1.utr3p1;Parent=g9549.t1 #PROT g9549.t1 g9549 MGNGASTPEEQPSTTNDKASGAAANNVKKSAPAAPKVIVSGPKKGRDDSSSEDDDDDEDVAAADKTKKGQAGGAGGHKEKDAPAADAKEDATAKAGGARKKDAQKKKNDDNKTLGTAAAAATKGRSGSLTPRGKSPTAPRGEGPGEGTFDTFVREDGVMFTTYVDASGQRFYVDWDYQTWVPFPKDWLKQGVFESERQAEQERAAAAHANTNAAMAIGGPAAAAVGLGDGMDEQGRVGTFKHPNGHVYQTYVFEVHKNVRYYFDDSSASWLRMPVELEKEVPEVQKMLKQIKTVLPKWKDDQEMIRALRENDYDVQDTLNWKMSEDSYNKKDGAGGKSPKPHHSDFEVLASIKLKLQETEVKLEEKTHELLKLHAELMELKKSAAKGGGGGGGDARTAKELAESHHQLKEREAQLRQNEDRIMELEHENQRLRDEGSRHATVATDASHVTQELEEVRQQLSAAQLKLKKANKKNKKQTEALKKLGKAAKEVKGLQKTVVTLKQQATTEFAAFAPLLLRFDDALRQMRVRYGDIDGVVAELRAKYRAENIQRRLLYNKLQELRGNIRIFCRCRRDNTGPLAVELPSESELVVTNTQGRASKFEFERIYMPSSTQSEVFTDTEPIITSCLDGYNVCILAYGQTGAGKTFTMMGTKADPGVNVRALTELFKISKARVEVEHHIIVSLVEIYNEQIIDLLGDPATSRAAKNDVCRGPTGNYVPGLTEVEVNSIDDVIRVMATGDKNRSVAATSMNSSSSRSHLILTIAVSCTNRLSKETLHGKLTLVDLAGSERVSRSDAQGQRLVEAAAINKSLSALGQVFQSLRTKALHIPYRNSKLTHLLQDSLGGDSKTCMFLNISPLTINADETLSTLNFGKAISGLEFGPAKKHVEKAPPR* # PASA_UPDATE: g9550.t1, single gene model update, valid-1, status:[pasa:asmbl_1547,status:3], valid-1 # PASA_UPDATE: g9550.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1548,status:3], valid-1 NODE_1421_length_11449_cov_42.1208 . gene 5498 7308 . - . ID=g9550;Name=g9550.t1 NODE_1421_length_11449_cov_42.1208 . mRNA 5498 7308 . - . ID=g9550.t1;Parent=g9550;Name=g9550.t1 NODE_1421_length_11449_cov_42.1208 . five_prime_UTR 7074 7308 . - . ID=g9550.t1.utr5p1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . exon 6852 7308 . - . ID=g9550.t1.exon1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . CDS 6852 7073 . - 0 ID=cds.g9550.t1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . exon 6521 6692 . - . ID=g9550.t1.exon2;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . CDS 6521 6692 . - 0 ID=cds.g9550.t1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . exon 5498 6347 . - . ID=g9550.t1.exon3;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . CDS 5761 6347 . - 2 ID=cds.g9550.t1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . three_prime_UTR 5498 5760 . - . ID=g9550.t1.utr3p1;Parent=g9550.t1 NODE_1421_length_11449_cov_42.1208 . mRNA 5498 7308 . - . ID=g9550.t1.1.5b6be70a;Parent=g9550;Name=g9550.t1 NODE_1421_length_11449_cov_42.1208 . five_prime_UTR 7074 7308 . - . ID=g9550.t1.1.5b6be70a.utr5p1;Parent=g9550.t1.1.5b6be70a NODE_1421_length_11449_cov_42.1208 . exon 6521 7308 . - . ID=g9550.t1.1.5b6be70a.exon1;Parent=g9550.t1.1.5b6be70a NODE_1421_length_11449_cov_42.1208 . CDS 6521 7073 . - 0 ID=cds.g9550.t1.1.5b6be70a;Parent=g9550.t1.1.5b6be70a NODE_1421_length_11449_cov_42.1208 . exon 5498 6347 . - . ID=g9550.t1.1.5b6be70a.exon2;Parent=g9550.t1.1.5b6be70a NODE_1421_length_11449_cov_42.1208 . CDS 5761 6347 . - 2 ID=cds.g9550.t1.1.5b6be70a;Parent=g9550.t1.1.5b6be70a NODE_1421_length_11449_cov_42.1208 . three_prime_UTR 5498 5760 . - . ID=g9550.t1.1.5b6be70a.utr3p1;Parent=g9550.t1.1.5b6be70a #PROT g9550.t1 g9550 MAPTSTLFLACVAAVAMFAVVARADDPHMPPVSGNILIVGNDGRALSCSDTKDSCYFYNLSGTGSGWTRIAPDSLPKSPFLPMYHIFAMPFVGSGTIKYSITTDGIYYSNDAGATFKILAPWVLPSTTTAVAPAATSTQNAPASSSQGQGPPPAPSSSSEAPMNPPVSSSDAGVASSSYAPAVTSTRAPAATSTNTACVPGDAITGGVLYTGMYYYKYGTTEEPIIEKINDITFNSFAIHVCGTAIGDAYTGPTPGSGSTVVFDGKWNKFTNSWTGKTTTTTTSGTSFNGQFEIISALPDKIEGSMESFGVTSLFIVEKPKTAVIG* #PROT g9550.t1.1.5b6be70a g9550 MAPTSTLFLACVAAVAMFAVVARADDPHMPPVSGNILIVGNDGRALSCSDTKDSCYFYNLSGTGSGWTRIAPDSVSISLFCTCTQIVALNIAFSYLRLKTNFSCGHCYLSVLTASLSGVCVCVVPLQLPKSPFLPMYHIFAMPFVGSGTIKYSITTDGIYYSNDAGATFKILAPWVLPSTTTAVAPAATSTQNAPASSSQGQGPPPAPSSSSEAPMNPPVSSSDAGVASSSYAPAVTSTRAPAATSTNTACVPGDAITGGVLYTGMYYYKYGTTEEPIIEKINDITFNSFAIHVCGTAIGDAYTGPTPGSGSTVVFDGKWNKFTNSWTGKTTTTTTSGTSFNGQFEIISALPDKIEGSMESFGVTSLFIVEKPKTAVIG* # ORIGINAL: g9553.t1 original gene structure, not modified by PASA NODE_1421_length_11449_cov_42.1208 AUGUSTUS gene 10063 11197 . + . ID=g9553;Name=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS mRNA 10063 11197 . + . ID=g9553.t1;Parent=g9553;Name=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS exon 10063 10213 . + . ID=g9553.t1.exon1;Parent=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS CDS 10063 10213 . + 0 ID=cds.g9553.t1;Parent=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS exon 10536 10777 . + . ID=g9553.t1.exon2;Parent=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS CDS 10536 10777 . + 2 ID=cds.g9553.t1;Parent=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS exon 10994 11197 . + . ID=g9553.t1.exon3;Parent=g9553.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS CDS 10994 11197 . + 0 ID=cds.g9553.t1;Parent=g9553.t1 #PROT g9553.t1 g9553 MSDKEYIKKWRKQVVLAAHGGESFGWISLGTQQGVDLFYSKQENGQIWCKGIGEVFASMEQVDLYLKDYEARLRGGEFVKGALVETIDEQTSVYYSVINFPNPFFNRDIVYLQHTAIWNDNIGVSLIRSVERESSPPTQRYVRGLVDCGGYVYEPLYDETKKVRVTYVLQLDPQGITPAWAARILAQDLGLNVVGYIM* # PASA_UPDATE: g9552.t1, single gene model update, valid-1, status:[pasa:asmbl_1543,status:3], valid-1 NODE_1421_length_11449_cov_42.1208 . gene 8424 9572 . + . ID=g9552;Name=g9552.t1 NODE_1421_length_11449_cov_42.1208 . mRNA 8424 9572 . + . ID=g9552.t1;Parent=g9552;Name=g9552.t1 NODE_1421_length_11449_cov_42.1208 . five_prime_UTR 8424 8525 . + . ID=g9552.t1.utr5p1;Parent=g9552.t1 NODE_1421_length_11449_cov_42.1208 . exon 8424 8729 . + . ID=g9552.t1.exon1;Parent=g9552.t1 NODE_1421_length_11449_cov_42.1208 . CDS 8526 8729 . + 0 ID=cds.g9552.t1;Parent=g9552.t1 NODE_1421_length_11449_cov_42.1208 . exon 8962 9572 . + . ID=g9552.t1.exon2;Parent=g9552.t1 NODE_1421_length_11449_cov_42.1208 . CDS 8962 9129 . + 0 ID=cds.g9552.t1;Parent=g9552.t1 NODE_1421_length_11449_cov_42.1208 . three_prime_UTR 9130 9572 . + . ID=g9552.t1.utr3p1;Parent=g9552.t1 #PROT g9552.t1 g9552 MRSSCVQFIVVAIAAILVMSDIASADRYKYFVAGPNGVVRACTASNKCKVAYIGASGDVAWAANMPMPLPDNAMISSFFNFRPDSNDVNKVWAISDSGVDISTDNGANFKKLAVFNCDKTCAK* # ORIGINAL: g9551.t1 original gene structure, not modified by PASA NODE_1421_length_11449_cov_42.1208 AUGUSTUS gene 7561 7926 . - . ID=g9551;Name=g9551.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS mRNA 7561 7926 . - . ID=g9551.t1;Parent=g9551;Name=g9551.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS exon 7561 7926 . - . ID=g9551.t1.exon1;Parent=g9551.t1 NODE_1421_length_11449_cov_42.1208 AUGUSTUS CDS 7561 7926 . - 0 ID=cds.g9551.t1;Parent=g9551.t1 #PROT g9551.t1 g9551 MVASVVLPAGDAAARGGNSTTVCALNRPGPPGLLIPQLSYAPPVTRWPPTDFAAILAAADLIRPACSGPAADTERLMHLTAAAAAAVALKAVSQTVLCCQALAGFGAKTAAPPHASELERG* # PASA_UPDATE: g14213.t1, single gene model update, valid-1, status:[pasa:asmbl_6846,status:3], valid-1 NODE_4004_length_2370_cov_36.281 . gene 420 1561 . - . ID=g14213;Name=g14213.t1 NODE_4004_length_2370_cov_36.281 . mRNA 420 1561 . - . ID=g14213.t1;Parent=g14213;Name=g14213.t1 NODE_4004_length_2370_cov_36.281 . five_prime_UTR 1435 1561 . - . ID=g14213.t1.utr5p1;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . exon 1399 1561 . - . ID=g14213.t1.exon1;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . CDS 1399 1434 . - 0 ID=cds.g14213.t1;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . exon 1112 1218 . - . ID=g14213.t1.exon2;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . CDS 1112 1218 . - 0 ID=cds.g14213.t1;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . exon 420 901 . - . ID=g14213.t1.exon3;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . CDS 709 901 . - 1 ID=cds.g14213.t1;Parent=g14213.t1 NODE_4004_length_2370_cov_36.281 . three_prime_UTR 420 708 . - . ID=g14213.t1.utr3p1;Parent=g14213.t1 #PROT g14213.t1 g14213 MLGEFDFAPRVKDWFRLVDWEDEGQTFGLACAALLNGALLIMAVWEKWDDTEISDGFALNGCIILFLLSIVFFYCYTSGCKRYHLLRTEYDDAAVQRSVFALLALFMHVCV* # ORIGINAL: g4949.t1 original gene structure, not modified by PASA NODE_1356_length_11794_cov_58.4352 AUGUSTUS gene 639 6076 . + . ID=g4949;Name=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS mRNA 639 6076 . + . ID=g4949.t1;Parent=g4949;Name=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 639 1378 . + . ID=g4949.t1.exon1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 639 1378 . + 0 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 1765 1922 . + . ID=g4949.t1.exon2;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 1765 1922 . + 1 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 2303 2400 . + . ID=g4949.t1.exon3;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 2303 2400 . + 2 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 2675 2850 . + . ID=g4949.t1.exon4;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 2675 2850 . + 0 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 3193 3435 . + . ID=g4949.t1.exon5;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 3193 3435 . + 1 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 3712 3834 . + . ID=g4949.t1.exon6;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 3712 3834 . + 1 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 4186 5310 . + . ID=g4949.t1.exon7;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 4186 5310 . + 1 ID=cds.g4949.t1;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 5638 6076 . + . ID=g4949.t1.exon8;Parent=g4949.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 5638 6076 . + 1 ID=cds.g4949.t1;Parent=g4949.t1 #PROT g4949.t1 g4949 MRSISRTLLFGAASAAILFLSAIVVVGASSFAPDHEHGSMTITTIDPLTGEAVSQTVVKGDTPKQRRALPSPKALERVDRYLNEMRERRTDAGDLDAEGRRAFFDAVNWRNEAFGLVPEEDEHPCFRGYRSSIKPGGICESLHNKRIALFGQGDAPLGTETTFLSRDQSIQKNFTLEFTDPLFRVWKGPEVRDESIMSMVGAVKRAGNLDNDPVDQPPPEPLGTGGRSFLERQCLALGPLPFFFSCTDRIDVLVHRCGQANAFVSFFDSIWSVDPEERYGAVDPNHSQVFYFCEELLEAEPSIEGTQRTMDHELHHVQQSGTTFVGPQYLIEGAATYVESVVLGLPLRSFYVSLSTVRNWVEMFSASLYDTTGLTRGRFYNFNQLFVAFLSQPDVLGGVAARAILLGMQTFNEASYDKKGLQSYAYFMQDPASATLTPPLSTWYRFADLVGKFRVALVASCMAVQPESPEYRMPASPDWAYECTAFQSFEGANSDGTGNITNALEVYGAAVTRLSRVSDPVVHVTGESGAVVYIVAHKVGATHSDVVPVKLEGRSGVDVHLRGDYIEVYVIQTHIDPMSEVASIEQLPKYFHRIHEDNSWGAVFENRDVGYDNNWVALLYTPTIELSATAASATLSINIKYAVEPEYDGARIELEMEGVEDRIVLTPLEGSSQYGHADAFGGPAWTAYSGDGTAAWVSASFDLSAFAGKRFRLVAVFRSDAGWASGDDPSLVGFFCKGIVVTVDDVSTTYDDQMNPEGVLPQPPAPGTRDILLGRPINFQLPAEMAGQEVFIDYSVAGQVRQSTVSAWWKRDTSFASLRERWIGTPSETSAAVDQARNDNPEILLLKPWEHVFVKVAAAEYAGRVSRIVLPLYNDAAGLNGIKVTLRRTQSPYHVLASSMREFPNSAIPGFVVFEFGADDAGAFFGAGESFFVSIEPQSARNPALRSLADWYLPLPLGRRPIGPKTSLYVAEQIEGSNTAAGTLLDNPFNSQNVPVRVQFVETTPQQQWEASFKDWQREFAKYEQQNGCPAAK* # ORIGINAL: g4952.t1 original gene structure, not modified by PASA NODE_1356_length_11794_cov_58.4352 AUGUSTUS gene 9561 10959 . - . ID=g4952;Name=g4952.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS mRNA 9561 10959 . - . ID=g4952.t1;Parent=g4952;Name=g4952.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 10723 10959 . - . ID=g4952.t1.exon1;Parent=g4952.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 10723 10959 . - 0 ID=cds.g4952.t1;Parent=g4952.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 9561 10553 . - . ID=g4952.t1.exon2;Parent=g4952.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 9561 10553 . - 0 ID=cds.g4952.t1;Parent=g4952.t1 #PROT g4952.t1 g4952 MAAPSAHIANGSSSNSDDVGPDGAFAVEPLPPLKTMRDFNDYCIKRGIPSLAQGMIELPPPLRLRQIAAECALSDDLHTYRNRFGESEFRLAIENLLRREYNTDVPSGAVLATHGVSGGVVATLAWICSQGKRRIGLIEPFYTYHVFQIERLFGPSAEVSYVPLTAREFKPDWAAVDAALKGGLDLLIVCNPSNPTGKVWAADDMRRLVRECKAAGCTLLLDECYSDMVFGGHKHFSPIEDGVDDSVIVVRGFSKVLGCQSWRVGYLVSTPATVAELMRVMDPIYICVPWLQHALGRYVSGSTDDFAAHKKACSDLIRRNWDVLSEAFRGALGWEPVQPDGTMYGMLRHARATDMAAAEDALRIGVGVCPGSMFFAHSPAHTGYIRIHCGITAEKADTIAAVLNAHASR* # ORIGINAL: g4951.t1 original gene structure, not modified by PASA NODE_1356_length_11794_cov_58.4352 AUGUSTUS gene 8319 9266 . + . ID=g4951;Name=g4951.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS mRNA 8319 9266 . + . ID=g4951.t1;Parent=g4951;Name=g4951.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 8319 9266 . + . ID=g4951.t1.exon1;Parent=g4951.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 8319 9266 . + 0 ID=cds.g4951.t1;Parent=g4951.t1 #PROT g4951.t1 g4951 MDCASSDLESQLTEVEMLAAVLMREGEFVLADPSAVAMAKRCVHTAPLSVPLIEFTVSIGDCHAAEGHEDAAQTALSVGLACTFPRDYPSKQLPSFVVRRITRTSLAPEAAVEFGRSACDALSRAVCAVAGTHPSGEMCVLSVVEWIRENTAHVVASFTPYRQNATDSSCGSWEVTSCSRDALPNGIVREWIFFHHIYNSQKRKHIVEWARELSISGFCVSGKPGVVCAEGTPDVVAEYVQRIRRLPWQKMQTREREEIPAVSASGAPARLLPDPLVELSFDGRGGGLDSMSALIAHLAERGLDNHLRATLKLAG* # ORIGINAL: g4950.t1 original gene structure, not modified by PASA NODE_1356_length_11794_cov_58.4352 AUGUSTUS gene 7166 7583 . + . ID=g4950;Name=g4950.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS mRNA 7166 7583 . + . ID=g4950.t1;Parent=g4950;Name=g4950.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 7166 7377 . + . ID=g4950.t1.exon1;Parent=g4950.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 7166 7377 . + 0 ID=cds.g4950.t1;Parent=g4950.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS exon 7505 7583 . + . ID=g4950.t1.exon2;Parent=g4950.t1 NODE_1356_length_11794_cov_58.4352 AUGUSTUS CDS 7505 7583 . + 1 ID=cds.g4950.t1;Parent=g4950.t1 #PROT g4950.t1 g4950 MCYVQQFWYMDRLFKLFILLSAGTSTSIHRCIFIGGAVMDRHVDSGTILRIGELRRSAAEHEGRPVRIVGRVACLLIEPHGLPIDRVQIVASGSAD* # ORIGINAL: g2449.t1 original gene structure, not modified by PASA NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS gene 7517 9127 . - . ID=g2449;Name=g2449.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS mRNA 7517 9127 . - . ID=g2449.t1;Parent=g2449;Name=g2449.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS exon 7517 9127 . - . ID=g2449.t1.exon1;Parent=g2449.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS CDS 7517 9127 . - 0 ID=cds.g2449.t1;Parent=g2449.t1 #PROT g2449.t1 g2449 MNGNPSFKMCDIGAIRNELQKHLGAGATAFFLDDLALRFVHSDEQNWCRFIEFVKQSHVVGSHDHAKLYLPNLLSHAQHTGNSLQMPPSMPTLSQLNFDLRGCGLEALASSMDISDDRQTTEGDGTTQHFDPQAAHFAEPVAPTPIINKQTLSANFLALRKIIGHTLLEDPSTTYRSIDHVLVTMNAITDSPHLDEAISDALCLSHAPGSRDHRGQVGRFRSESGAYTVKVSYFRAERRRVVDIKLRWVGDELRACSWLVPASRESRRAIRLPGAFDLVAGLWASRAVHELGGDVRAIVLGSTTVYFTLPADVDLATVALPDGFVLVPAAELDWERTNPRTWTVEELLAYATYANVPATAIDAMREEQIDGATLVDKEFRVALLRRGVSKAALEIIEDMREVLVDAIEGELDKDLGASVRSPEVRGTPVDHSLPVSVRTEGTRADIQVDTRPPGLLSVDSGTFSVEESIDGTRNASRLPTAAFRAASQLAGTNYGTECPSADDATQNASPAGATPTIADAQASPAVVAWVRAQWGR* # ORIGINAL: g2450.t1 original gene structure, not modified by PASA NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS gene 9747 11183 . + . ID=g2450;Name=g2450.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS mRNA 9747 11183 . + . ID=g2450.t1;Parent=g2450;Name=g2450.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS exon 9747 11183 . + . ID=g2450.t1.exon1;Parent=g2450.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS CDS 9747 11183 . + 0 ID=cds.g2450.t1;Parent=g2450.t1 #PROT g2450.t1 g2450 MSFAKDEPASSRTLVLGNETYSIVKEIGIGAFGVVCRATRVDGKEFALKFVRLANGLQRANTEKEAKVQCTTRHPNVVGCFGYWTMMFGPIRCGVLLLEYCPNGSLKTLIDNLANKRNNGEGNRFLLRSEGARQDFFTLLLGQMVAALAHLEESGIVHSDIKPDNIVVDVHWNFKLCDFGLVSVLDDKLSKMYVWDQPKGCFPYMAPEVFAALDAQSTVCFSAKADAYSLGATLLDALRLSSQPLAGCSRESVRSFHSRADGGIKIEDTWHPCENVRFVLCRLVERSPTERLSAIEVLTIMHNRRLIDDRRRPTRLAAWLNRQDLGEPMVADEPMGADEPMVADGAQTIDDVGVMVQGDVREAVYTAASALKKSVGGVGPQLAMLLLLVIVIVTLTGVLSARAARVESHADSWVVAMIGAIMGSLSFAILALGLIFGCYHFSWLRRMYRRETRFFIDPSFITLVENPLHHGRIYDGLE* # ORIGINAL: g2448.t1 original gene structure, not modified by PASA NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS gene 4416 6863 . - . ID=g2448;Name=g2448.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS mRNA 4416 6863 . - . ID=g2448.t1;Parent=g2448;Name=g2448.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS exon 4416 6863 . - . ID=g2448.t1.exon1;Parent=g2448.t1 NODE_1345_length_11886_cov_20.1396_potentialcontaminant AUGUSTUS CDS 4416 6863 . - 0 ID=cds.g2448.t1;Parent=g2448.t1 #PROT g2448.t1 g2448 MTTKTDGGAGVVQAAPVENAINHDITKQLLGTVLSTRMIQDMGAIFSNRSGISIKNIAHLVLLMSLDEIKVIVASSIKTVKTYIVTHGTNVFSFTSIASLLRFIRSVIVWTFRQLTLYSLRKYIKPDLLLTTPLTTIQADGSCAIINFEPTVPLMQSLVAYIKSHPSECSLSVSNQSTVKVMNLEESMLSELWESVVIRFANYTLRISTPITMSFKRKQGHEAVLDSFSPVIVSQSDVKRLTDLLPCGEIKKFIRETVDRFTDVSREYKVQIPGVPHDKHKYDLNLMITKSVNAELAIAYMYKKAFPNIDMNICHYEYALLQIFFKIYGIDNRLRIDSYKLFNHIIHISSEDGKAIIDLTSRDNYLCDVLKSALHDIEIPFPILPTDEVQMYREGVLPLSNGRKDKPSTAARVSVSCTSQSLSCKAMSEEFDAFIAHLGTYTNLTVRKNIKIYNIRIERKENEVEIPNPAYKEWKARTTKSKSEETELKADGVEDEKKDDDSKEPKKSKKAKRAAAARFGGGGKWGGGWYGESSYFYDPAPAEHILKTEISKSVVVDLVNEKSKPLNTLYMRKNDMFKLKNCVEAFADRQELLSDLGLPNKLGILLYGKPGTGKSSAIIAVATHLKKDVYYVHLNCVQTNDELQMIFDHVNKQCLNGGIIIFEDIDAMTTVVHKRQTSPNDSFSTDAGSGSEKSVSLVDIVNQQDSQLTLEYFLNVLQGSLTQDGTIFMATTNHLETLDPAFYRDGRFDVRIEMKMCDSYQINTIYSQLLRRPIPAELLERIAEDKYTPANLIFHIKPYMFGDYTDEEILAPFLH* # ORIGINAL: g3092.t1 original gene structure, not modified by PASA NODE_10458_length_306_cov_35.0216_potentialcontaminant AUGUSTUS gene 1 285 . - . ID=g3092;Name=g3092.t1 NODE_10458_length_306_cov_35.0216_potentialcontaminant AUGUSTUS mRNA 1 285 . - . ID=g3092.t1;Parent=g3092;Name=g3092.t1 NODE_10458_length_306_cov_35.0216_potentialcontaminant AUGUSTUS exon 1 285 . - . ID=g3092.t1.exon1;Parent=g3092.t1 NODE_10458_length_306_cov_35.0216_potentialcontaminant AUGUSTUS CDS 1 285 . - 0 ID=cds.g3092.t1;Parent=g3092.t1 #PROT g3092.t1 g3092 MNKIQYTVSLKDWPRCPIPMPSDVTITLEAAERLFPPIISDLVTGGGAALSLGSAMSMSLTSVAQYSMVTSMKEMSRCQDTNFYDEDQNDSYDRS # PASA_UPDATE: g3254.t1, single gene model update, valid-1, status:[pasa:asmbl_7760,status:12], valid-1 NODE_498_length_22290_cov_37.7416 . gene 3600 7135 . + . ID=g3254;Name=g3254.t1 NODE_498_length_22290_cov_37.7416 . mRNA 3600 7135 . + . ID=g3254.t1;Parent=g3254;Name=g3254.t1 NODE_498_length_22290_cov_37.7416 . five_prime_UTR 3600 3789 . + . ID=g3254.t1.utr5p1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . exon 3600 5621 . + . ID=g3254.t1.exon1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . CDS 3790 5621 . + 0 ID=cds.g3254.t1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . exon 5804 5957 . + . ID=g3254.t1.exon2;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . CDS 5804 5957 . + 1 ID=cds.g3254.t1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . exon 6128 6242 . + . ID=g3254.t1.exon3;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . CDS 6128 6242 . + 0 ID=cds.g3254.t1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . exon 6504 6742 . + . ID=g3254.t1.exon4;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . CDS 6504 6742 . + 2 ID=cds.g3254.t1;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . exon 6932 7135 . + . ID=g3254.t1.exon5;Parent=g3254.t1 NODE_498_length_22290_cov_37.7416 . CDS 6932 7135 . + 0 ID=cds.g3254.t1;Parent=g3254.t1 #PROT g3254.t1 g3254 MADVEDGEIMEVSPAVSRPLLSAAVGAEVDAVEVDPTSDSAPLTASKRKADESDEVHEGAKRPRRDSFEDGDKGEKEPKKGDDKRERSSHSHSRSHSDSHRRSSGHDKDRSRGADDKEKTGHHRGSRHGDHRESHRDDKDRHSHRDKDRAGEKDKDKDKERVKEKEREKEKEKEKEKEREKEKEKEREKEKEKETEREREREKEKERERKDVREDPRDRHDDRDRHRARERSRSRDRGSHGRDAGRRDDRRDSARGYDRDRRRSRSRSPRRGDRDRGRDGRSARDSDRKKADDDEKPIEAVIDDEEGDDMSEDAIIERRRLQRLAIMEKYKKEISTAPSAPTETPASASTSAAMVTAGTPAETASTAIATAATATATATATDASKEAENDDSSEHAQQRDVADDVSSIAGEQTLAIESIQKPQSGPSGAPLLGADASIAPSETASAMASAMQTPQVATIVKPKRTVMADMFADDVEVFAEQGGIAARNPVSIAAVRGDGGGEHLALTDNWDDAEGYYRAKIGEVIDGRFTVSGNSNKGVFSNVIRARDLQGREVAIKIIRGNETMLKAGLREVEFLRQLNAADQEDRYHCVRLLGNCYHKNHLCLVFESLSLNLRELLKKYGAGIGLNLIAVRSYAQQLFLALKLMERCKLLHGDIKPDNILVSESKQTLKLCDFGSASTIEENEPTGYVGSRFYRAPEIMLGLRYDYGIDMWSVACTLFEIYTGKILFPGHSNNQMLRLMMDVKGKVSNKVIRKGKFRGDHFDDDLNFLYKDIDKVTEKPTVRTLKVIQPTRDLNVLLASNQALSAEEGRMLSSFRDLLDKCLALDPSKRLTPSQALHHPFIKEKS* # ORIGINAL: g3256.t1 original gene structure, not modified by PASA NODE_498_length_22290_cov_37.7416 AUGUSTUS gene 21335 22230 . + . ID=g3256;Name=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS mRNA 21335 22230 . + . ID=g3256.t1;Parent=g3256;Name=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS exon 21335 21481 . + . ID=g3256.t1.exon1;Parent=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS CDS 21335 21481 . + 0 ID=cds.g3256.t1;Parent=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS exon 21718 21873 . + . ID=g3256.t1.exon2;Parent=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS CDS 21718 21873 . + 0 ID=cds.g3256.t1;Parent=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS exon 22219 22230 . + . ID=g3256.t1.exon3;Parent=g3256.t1 NODE_498_length_22290_cov_37.7416 AUGUSTUS CDS 22219 22230 . + 0 ID=cds.g3256.t1;Parent=g3256.t1 #PROT g3256.t1 g3256 MSKDNDVRLQKSVGAMQQEKMRYLQREALHREVHDILLESNIGGRDSFEMRDRLELLLSVAGAKNCLNFSPVDPDDSTTLLGLTEDDLDAVAHARLGKKTDLCE* # PASA_UPDATE: g3253.t1, single gene model update, valid-1, status:[pasa:asmbl_7762,status:12], valid-1 NODE_498_length_22290_cov_37.7416 . gene 328 3285 . - . ID=g3253;Name=g3253.t1 NODE_498_length_22290_cov_37.7416 . mRNA 328 3285 . - . ID=g3253.t1;Parent=g3253;Name=g3253.t1 NODE_498_length_22290_cov_37.7416 . five_prime_UTR 3127 3285 . - . ID=g3253.t1.utr5p1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 2866 3285 . - . ID=g3253.t1.exon1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 2866 3126 . - 0 ID=cds.g3253.t1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 2450 2617 . - . ID=g3253.t1.exon2;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 2450 2617 . - 0 ID=cds.g3253.t1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 1867 2254 . - . ID=g3253.t1.exon3;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 1867 2254 . - 0 ID=cds.g3253.t1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 1413 1541 . - . ID=g3253.t1.exon4;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 1413 1541 . - 2 ID=cds.g3253.t1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 847 1058 . - . ID=g3253.t1.exon5;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 847 1058 . - 2 ID=cds.g3253.t1;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . exon 328 393 . - . ID=g3253.t1.exon6;Parent=g3253.t1 NODE_498_length_22290_cov_37.7416 . CDS 328 393 . - 0 ID=cds.g3253.t1;Parent=g3253.t1;3_prime_partial=true #PROT g3253.t1 g3253 MDKDKDLAPLNAAIIRGLNDKLYDKRKTAALEIERIIKDLVTNKDLGKIGRVLAILRQEFAYSPNPNSRKGGLIGLAATAIALGAVGDINAYLEELVAPVLSCFSDVDSRVRYYACESIYNIAKVARPSTLLYFNEIFDALSKLAADPDTNVKSGAELLDRLVKDIVTESTSFNIKKFIPLLRERIAAVDPFVRQFLVSWVTVLDSVPDIELVEYLPDFLDGLFRILSDNSREIRKQTEAALGEFLRELQQHTTNINYARLIEITVIHCASKDQLTQFTALTWIQTFITMGKAEMLPFNAQLLGAILPCLAHNVDKIRETAVHANQMLVNIVVESESTATPDAPPTNFSLGPTVNVLALQLLHESVETRIAALRWILMLHVKARRKIFALADEMFPALLKTLSDPADK # PASA_UPDATE: g3255.t1, single gene model update, valid-1, status:[pasa:asmbl_7761,status:12],[pasa:asmbl_7763,status:12], valid-1 NODE_498_length_22290_cov_37.7416 . gene 8537 20325 . - . ID=g3255;Name=g3255.t1 NODE_498_length_22290_cov_37.7416 . mRNA 8537 20325 . - . ID=g3255.t1;Parent=g3255;Name=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 20272 20325 . - . ID=g3255.t1.exon1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 20272 20325 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 20045 20113 . - . ID=g3255.t1.exon2;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 20045 20113 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 19886 19922 . - . ID=g3255.t1.exon3;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 19886 19922 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 19701 19761 . - . ID=g3255.t1.exon4;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 19701 19761 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 19203 19378 . - . ID=g3255.t1.exon5;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 19203 19378 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 18834 18910 . - . ID=g3255.t1.exon6;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 18834 18910 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 18403 18472 . - . ID=g3255.t1.exon7;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 18403 18472 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 17813 18002 . - . ID=g3255.t1.exon8;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 17813 18002 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 17579 17651 . - . ID=g3255.t1.exon9;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 17579 17651 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 17281 17418 . - . ID=g3255.t1.exon10;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 17281 17418 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 17054 17159 . - . ID=g3255.t1.exon11;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 17054 17159 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 16745 16893 . - . ID=g3255.t1.exon12;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 16745 16893 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 16376 16504 . - . ID=g3255.t1.exon13;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 16376 16504 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 15464 16136 . - . ID=g3255.t1.exon14;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 15464 16136 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 14903 15142 . - . ID=g3255.t1.exon15;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 14903 15142 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 14386 14602 . - . ID=g3255.t1.exon16;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 14386 14602 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 12794 14088 . - . ID=g3255.t1.exon17;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 12794 14088 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 12570 12577 . - . ID=g3255.t1.exon18;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 12570 12577 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 11955 12301 . - . ID=g3255.t1.exon19;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 11955 12301 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 11653 11668 . - . ID=g3255.t1.exon20;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 11653 11668 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 10735 11290 . - . ID=g3255.t1.exon21;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 10735 11290 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 10377 10504 . - . ID=g3255.t1.exon22;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 10377 10504 . - 2 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 9777 10105 . - . ID=g3255.t1.exon23;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 9777 10105 . - 0 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 9465 9557 . - . ID=g3255.t1.exon24;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 9465 9557 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . exon 8537 9201 . - . ID=g3255.t1.exon25;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . CDS 8853 9201 . - 1 ID=cds.g3255.t1;Parent=g3255.t1 NODE_498_length_22290_cov_37.7416 . three_prime_UTR 8537 8852 . - . ID=g3255.t1.utr3p1;Parent=g3255.t1 #PROT g3255.t1 g3255 MANIKQLRLVLWKNYLLKKRRPLASLIELLLPLALFVILLYVRHRKPPVHYIDAVDSPQCLPSMGMACLETYKGFGSRYLDAVINRRDVDEAHSFANGTAGDDDPDGGRQRRTDIASALLSRQILYAPSGGEVEAFIDSLKMEIASYFGAATIILLGQTFKGFPDEESLAEHATGNSDVLAGIVLNNVVDGKLPSVVDYSLRMRPYPFGTQRTDKLFPNYRRKAPYSGSVYLYGGFTLLQDFIDRAVIRFRTGQSLNLATFVEWTPYPEHTKDSFAAGIAYTFPLLMVLSWIYSVSMLVKGIVHEKELRLKEVMKMMGLKTGIYWAGWYIQGLVFMVTSSICITVIIKSGGLLIYSSGSVIFVFLLAFAMATISLSFLISVFFSRAKLAAACAGIVYFLSYLPYVIVMRETETMSSSQKGAACLLSTTALGVGAAYLSDFEQRGDGLHWNNVFETQPYDNFNFGRVIIMLFIDSFLYLILAWYIEGVFPGQFGVPRPWYFPFTKAYWSSSPATSSSQGLSNTNGTSVAQLAGVARKVKGAVLSLAQRNGKTRGKHAPLSGDDDEGGDRLLGTDEEVAADDGRDGTFAMTDESRGDASATSLANDVPSDDSVRGGGASDFEAEPRGLEAGIRLSHLGKVYDNGKVAVEDLSLNMYRGQITALLGHNGAGKTTTMSMLTGLFPPSSGDAFVNGASIREGMDSIRQSLGFVPQYNCLLESLTVMEHCQLFCGFKGVDSDRVDAECRQIIEDLHLSDKINANAQTLSGGMKRKLSVGLALVGGSKVIICDEASAGVDVSSRRAIWDLLIRHKEGRTILLSTHHMDEADFLGDRIAIIADGRLRCVGSSMFLKSRFGVGYHLTVVKKSGCNEDAVADAVARNVPGSRPSGNAGAELSFVLPREESHLFPQLLDSLDSARAELGISSYGMSVTTLEEVFLRVAETPAEGDGSSASANAPDKSVRDIRSVDMGGADNVADHPLASMKDVHVGKFGHYLLQFGALVVKRFNHAKRDKKAVLSQLLLPACFVAIAMAVATMYPPPTDQPALAMVPTMFASALPAKYAPTQVLVSATDNTTTVYPMLAQIIEALPRIDPTEQYVNVPYHASANSSLRENLSPLEREWLENEHALTMRSYGGYVFGHDPTGLAGDRPAVVIVYQGVAYHSLPVYLTLLNNAALQVMSGGLHPEWGIVSRNYPLPKTAMQKADEYRRQGTDLVVGIFLIIALSFVPASFVLYLVQERSVNAKHMQLASGASQTVYWLATFMWDLFTYLFPLLVSILVIVAFQDAAYTGENLKAVFLLMLAYCWSMTPLMYILSFLFNVPPTAYVVLICVNLFTGLTSTIATYVLEIFKKSDPDLQSLNDLLMAVFPLLPNYCLGRGLMDIAVNEYVSEYYGIAGIQRKSDPLAWGITGKNLTFMFIEGWVFFAITLVVEYRFFGASRFLGKHIMRFAPSFKRWWNALRCCCGRHVDGHVRLESDVEGGVLGVGLRELGSEASGTNDEDSDVREERRRVEGGEGASDILRVEGLRKDFSNVLGTNAMGRPAVDNVWFGVPRGECFGLLGVNGAGKTTTFRMLTGDCDPSSGDAYLDNLSITRELSKVRERIGYCPQFDALNDLLTGRELLWMYARLRGLKELAIPRVVSWCIDRLHLGAWADRPCGTYSGGNKRKLSVAVALVGNPPVIFCDEPSTGIDVVSRRFLWNTIASMRGAGRSIILTSHSMEECEALCTRMAIMVQGRFRCLGSAQHLKDKFGSGYTLILRVSHDREDAVPALRRHIESVFDGAIMKECHQTLLQYELPAAGDPNAIRGVNVDGQTEPSPRLSLAKVFSTMESAKDEYGIEDYSLSQTTLEQVFIGFAREQPSEED* # PASA_UPDATE: g14104.t1, single gene model update, valid-1, status:[pasa:asmbl_6653,status:12], valid-1 NODE_3861_length_2608_cov_37.7213 . gene 21 1137 . - . ID=g14104;Name=g14104.t1 NODE_3861_length_2608_cov_37.7213 . mRNA 21 1137 . - . ID=g14104.t1;Parent=g14104;Name=g14104.t1 NODE_3861_length_2608_cov_37.7213 . five_prime_UTR 991 1137 . - . ID=g14104.t1.utr5p1;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . exon 934 1137 . - . ID=g14104.t1.exon1;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . CDS 934 990 . - 0 ID=cds.g14104.t1;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . exon 484 786 . - . ID=g14104.t1.exon2;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . CDS 484 786 . - 0 ID=cds.g14104.t1;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . exon 21 206 . - . ID=g14104.t1.exon3;Parent=g14104.t1 NODE_3861_length_2608_cov_37.7213 . CDS 21 206 . - 0 ID=cds.g14104.t1;Parent=g14104.t1;3_prime_partial=true #PROT g14104.t1 g14104 MGDEEDVSRLSLEDRLMHKSWKVRVAAYDDAVKEFTRADDPDSPDLLAYASLLPKIVADSNANAQEKSIDAVRAFCEKASCASRCTGELATALVKKCFNQRDRTKQKAMDLCLLLIEIDKSEPVITEVMGGLSDKQPKVVIACIQTIFQALSQFGAKNMTLKPICKDLHNILENKDKTVREE # PASA_UPDATE: g1622.t1, single gene model update, valid-1, status:[pasa:asmbl_6327,status:3], valid-1 NODE_362_length_25964_cov_41.4367 . gene 5926 8044 . - . ID=g1622;Name=g1622.t1 NODE_362_length_25964_cov_41.4367 . mRNA 5926 8044 . - . ID=g1622.t1;Parent=g1622;Name=g1622.t1 NODE_362_length_25964_cov_41.4367 . five_prime_UTR 7246 8044 . - . ID=g1622.t1.utr5p1;Parent=g1622.t1 NODE_362_length_25964_cov_41.4367 . exon 6674 8044 . - . ID=g1622.t1.exon1;Parent=g1622.t1 NODE_362_length_25964_cov_41.4367 . CDS 6674 7245 . - 0 ID=cds.g1622.t1;Parent=g1622.t1 NODE_362_length_25964_cov_41.4367 . exon 5926 6430 . - . ID=g1622.t1.exon2;Parent=g1622.t1 NODE_362_length_25964_cov_41.4367 . CDS 6109 6430 . - 1 ID=cds.g1622.t1;Parent=g1622.t1 NODE_362_length_25964_cov_41.4367 . three_prime_UTR 5926 6108 . - . ID=g1622.t1.utr3p1;Parent=g1622.t1 #PROT g1622.t1 g1622 MSIRVAFRRLAEALPFSFRIPLRASTPYVSPIVAVRLMHPSTTGHPETRHPNPMLPNDDARTMPHASASATREKENGPNPGDSQDGQQAAIDEFKGKQRKSADDKREGEVKATEAVARAIATYQSSPNELAAEPAALNMWRELSEKGVNLPGGTALSAIEIWELIKDRDDGPPEGVGTVFRGMLAQRDFENVKKSLCEYKDTFKSPVPTQIFNDLIEHCIERDGPEFMKIGLDLLAVMTECGVHPDDKTHELSETIISYVPFEERISATVAEDSVSTKAIEKKSRARDRVETPASQM* # PASA_UPDATE: g1628.t1, single gene model update, valid-1, status:[pasa:asmbl_6331,status:12], valid-1 NODE_362_length_25964_cov_41.4367 . gene 21104 24996 . + . ID=g1628;Name=g1628.t1 NODE_362_length_25964_cov_41.4367 . mRNA 21104 24996 . + . ID=g1628.t1;Parent=g1628;Name=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 21104 21135 . + . ID=g1628.t1.exon1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 21104 21135 . + 0 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 21289 22341 . + . ID=g1628.t1.exon2;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 21289 22341 . + 1 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 22792 22873 . + . ID=g1628.t1.exon3;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 22792 22873 . + 1 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 23243 23413 . + . ID=g1628.t1.exon4;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 23243 23413 . + 0 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 23601 23681 . + . ID=g1628.t1.exon5;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 23601 23681 . + 0 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . exon 24115 24996 . + . ID=g1628.t1.exon6;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . CDS 24115 24243 . + 0 ID=cds.g1628.t1;Parent=g1628.t1 NODE_362_length_25964_cov_41.4367 . three_prime_UTR 24244 24996 . + . ID=g1628.t1.utr3p1;Parent=g1628.t1 #PROT g1628.t1 g1628 MDARRGRRPLGLRKTTKRTLDFDVSRVASNPISGGSRRQSEAASSNAFSTPASVPRRQSPRRRTSPLPTDHDASYQNDIDMDDEILRVYSGMKLPATDPEGDRRQSTTDPVVGQSPKRRKLMKVSEDMDGASPPVPKRKFKGSSVEARGIDSHRRAEDGETDEEEEHQRPRKRQSHPSRMDADSEDDDASRGDVGVGNRTDKTGSLKRQKGDAPDRPHEQPGVPLPHTAAPASRGRTLPTAAVLKGKDKGKGKAPMQESPVSRRTYDDSAGSDVDDEEASPARADHVTRRAAESRAMSPMFRREFDSSGGESDGSWADGDDAGRRETVVKLQPRDGGSGKRAQMDLHDVALSAVEELIAAERKEAATDKGSRRVLDDFLAELQLAFREQIDAAEEHRVLMNAVRRAAATKRRLRKALLEVEKNRLRVAREIAVARQEQSARDANKKCVEEANALLVGLDALRQAASESPPNPSAAFADAENLDGLVHSAHTLFSSIRSIADANRVLERLVDAMES* # PASA_UPDATE: g1624.t1, single gene model update, valid-1, status:[pasa:asmbl_6328,status:12], valid-1 NODE_362_length_25964_cov_41.4367 . gene 10102 11057 . - . ID=g1624;Name=g1624.t1 NODE_362_length_25964_cov_41.4367 . mRNA 10102 11057 . - . ID=g1624.t1;Parent=g1624;Name=g1624.t1 NODE_362_length_25964_cov_41.4367 . five_prime_UTR 10996 11057 . - . ID=g1624.t1.utr5p1;Parent=g1624.t1 NODE_362_length_25964_cov_41.4367 . exon 10909 11057 . - . ID=g1624.t1.exon1;Parent=g1624.t1 NODE_362_length_25964_cov_41.4367 . CDS 10909 10995 . - 0 ID=cds.g1624.t1;Parent=g1624.t1 NODE_362_length_25964_cov_41.4367 . exon 10102 10603 . - . ID=g1624.t1.exon2;Parent=g1624.t1 NODE_362_length_25964_cov_41.4367 . CDS 10199 10603 . - 0 ID=cds.g1624.t1;Parent=g1624.t1 NODE_362_length_25964_cov_41.4367 . three_prime_UTR 10102 10198 . - . ID=g1624.t1.utr3p1;Parent=g1624.t1 #PROT g1624.t1 g1624 MSGAATCVAFGGTLIRALRASTRLCTPVQPIHSFRGVLRPYSATARKMSDEGGVVQRRIEEKLKAQFAPVHLQVINESHMHSVPRGSETHFKVVVVSEKFADTKLIDRHRLVNGTLKEELNGGVHALSIQAVTPQQWETTAHAVNKSPACMGGSKHDAAKTNS* # ORIGINAL: g1629.t1 original gene structure, not modified by PASA NODE_362_length_25964_cov_41.4367 AUGUSTUS gene 25510 25827 . - . ID=g1629;Name=g1629.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS mRNA 25510 25827 . - . ID=g1629.t1;Parent=g1629;Name=g1629.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 25510 25827 . - . ID=g1629.t1.exon1;Parent=g1629.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 25510 25827 . - 0 ID=cds.g1629.t1;Parent=g1629.t1 #PROT g1629.t1 g1629 MVDKLPGSRSWAADAPPDDRACDVMLCDKDAPQSIVDKAEILGAAVLSPEWVVQSVIHGKIADPRANQAYRHALPSNYNAAELCRHVTGAFAQSGTSGAASASLL* # ORIGINAL: g1621.t1 original gene structure, not modified by PASA NODE_362_length_25964_cov_41.4367 AUGUSTUS gene 2737 4415 . + . ID=g1621;Name=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS mRNA 2737 4415 . + . ID=g1621.t1;Parent=g1621;Name=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 2737 2782 . + . ID=g1621.t1.exon1;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 2737 2782 . + 0 ID=cds.g1621.t1;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 3173 3270 . + . ID=g1621.t1.exon2;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 3173 3270 . + 2 ID=cds.g1621.t1;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 3411 3632 . + . ID=g1621.t1.exon3;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 3411 3632 . + 0 ID=cds.g1621.t1;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 3894 4415 . + . ID=g1621.t1.exon4;Parent=g1621.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 3894 4415 . + 0 ID=cds.g1621.t1;Parent=g1621.t1 #PROT g1621.t1 g1621 MAADAIRKQLEALMGGTDAGSDGVKFSDDKVCKHFLLGLCPHDLFTNTRVDLGSCDKLHSAKLKEQYEDAAKSRDYGYDREHLMHLQELITDCDRKIAKTKSRLDETQREDPEQAAVSRQIQDLVAIVGEKVAKAEEAGSEGKVDESIALLKEVEDLNTQKKNLEADYKKLLPPGSNVQKLRVCEICGACLSLFDADIRLADHFGGRMHLGYLQMRERINQIRDKRRNAASASAPARDSRDSRDGRDSRDSRDYRDSRDRDRDRSRYSRDSRDYRDDRRDDRRDDRRGRSRSRSP* # ORIGINAL: g1625.t1 original gene structure, not modified by PASA NODE_362_length_25964_cov_41.4367 AUGUSTUS gene 11724 12656 . + . ID=g1625;Name=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS mRNA 11724 12656 . + . ID=g1625.t1;Parent=g1625;Name=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 11724 11738 . + . ID=g1625.t1.exon1;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 11724 11738 . + 0 ID=cds.g1625.t1;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 11852 11986 . + . ID=g1625.t1.exon2;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 11852 11986 . + 0 ID=cds.g1625.t1;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 12084 12215 . + . ID=g1625.t1.exon3;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 12084 12215 . + 0 ID=cds.g1625.t1;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 12456 12656 . + . ID=g1625.t1.exon4;Parent=g1625.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 12456 12656 . + 0 ID=cds.g1625.t1;Parent=g1625.t1 #PROT g1625.t1 g1625 MAPPKAGDRLPSVTLYENNPGGGVNLADLFKGKKGILFGVPGAFTPGCSKTHLPGYVNDFEKLKGKGAEVIVCVSVNDPFVMAAWGQANNVDGKVRMLADSRGELAKALDIELDATAKLGNIRMKRFSAVVEDGVIKSFNLEEDGGGLTCSLSNVIASQL* # PASA_UPDATE: g1623.t1, single gene model update, valid-1, status:[pasa:asmbl_6330,status:12], valid-1 NODE_362_length_25964_cov_41.4367 . gene 8239 9815 . + . ID=g1623;Name=g1623.t1 NODE_362_length_25964_cov_41.4367 . mRNA 8239 9815 . + . ID=g1623.t1;Parent=g1623;Name=g1623.t1 NODE_362_length_25964_cov_41.4367 . five_prime_UTR 8239 8322 . + . ID=g1623.t1.utr5p1;Parent=g1623.t1 NODE_362_length_25964_cov_41.4367 . exon 8239 8690 . + . ID=g1623.t1.exon1;Parent=g1623.t1 NODE_362_length_25964_cov_41.4367 . CDS 8323 8690 . + 0 ID=cds.g1623.t1;Parent=g1623.t1 NODE_362_length_25964_cov_41.4367 . exon 9109 9815 . + . ID=g1623.t1.exon2;Parent=g1623.t1 NODE_362_length_25964_cov_41.4367 . CDS 9109 9595 . + 1 ID=cds.g1623.t1;Parent=g1623.t1 NODE_362_length_25964_cov_41.4367 . three_prime_UTR 9596 9815 . + . ID=g1623.t1.utr3p1;Parent=g1623.t1 #PROT g1623.t1 g1623 MGYEDVLHSALGSVRGSLAAVSAFAHGNGTEIDFINALAIIMISLGILSFVSLQLTIAPYGRYSVTASAIYGFMMNGRLAWFLQEVPCVVMAAFAYAYGEERLVSSWANRILFGMFIAHYINRALIYPVRMRGGKPTPFGVFFLAFIFCIVNGYMQTRYVLSYAEYDEEWIYDPRFIAGVNLFIIGMRINMQADDILRNLRKPGESGYKIPKGGMFDYVSGANFFGEILEWTGFAIASWSLVGTAFALFTFCNIGPRALHHHQWYKQKFEDYPKSRKALIPFLL* # PASA_UPDATE: g1627.t1, single gene model update, valid-1, status:[pasa:asmbl_6329,status:3], valid-1 NODE_362_length_25964_cov_41.4367 . gene 16308 20447 . - . ID=g1627;Name=g1627.t1 NODE_362_length_25964_cov_41.4367 . mRNA 16308 20447 . - . ID=g1627.t1;Parent=g1627;Name=g1627.t1 NODE_362_length_25964_cov_41.4367 . five_prime_UTR 20195 20447 . - . ID=g1627.t1.utr5p1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 20164 20447 . - . ID=g1627.t1.exon1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 20164 20194 . - 0 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 19180 19955 . - . ID=g1627.t1.exon2;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 19180 19955 . - 2 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 18659 18737 . - . ID=g1627.t1.exon3;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 18659 18737 . - 0 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 18249 18352 . - . ID=g1627.t1.exon4;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 18249 18352 . - 2 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 17839 17957 . - . ID=g1627.t1.exon5;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 17839 17957 . - 0 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 17085 17298 . - . ID=g1627.t1.exon6;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 17085 17298 . - 1 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . exon 16308 16890 . - . ID=g1627.t1.exon7;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . CDS 16783 16890 . - 0 ID=cds.g1627.t1;Parent=g1627.t1 NODE_362_length_25964_cov_41.4367 . three_prime_UTR 16308 16782 . - . ID=g1627.t1.utr3p1;Parent=g1627.t1 #PROT g1627.t1 g1627 MADAKTDAEKAGDASAARKRTAVDFRFGDALGEGSYSTVVFAEEIATGKEFAVKILEKKHIIKENKIKYVNTEKLVLNALNHPFFVRLYYTFQDAQKLYFVLTYAKNGELLDFIKKLGSFDEKCTQYYAAEIVLALEHMHGLGIIHRDLKPENILLDRAMHIKITDFGTAKILSEPAAAEATSASDQRAKANSFVGTAEYVSPELLTQKCACKSSDLWALGCIVYQLLAGRPPFRAGNEYQIFQKITKLEYAIPDGFPPAAKDLVEKLLVLDPDQRFGAENNGGFAALKAHPFFEGVNWSTLTESTPPDLVPYLPACKSGDADLHGDIVLSRGDDKDEIFPEDEARDRAEPPADSDRSKLLAKQAAESKWHQFTTTNELIIKTGIVNKRKGLFSKRRQLILTDLPRLLYIDTEKMIVKGEIPWSASLQPEFKNARTFFIHTPKRTYYLEDPGSDAKDWCDSVSRVLTETTQAPALV* # ORIGINAL: g1620.t1 original gene structure, not modified by PASA NODE_362_length_25964_cov_41.4367 AUGUSTUS gene 76 2068 . - . ID=g1620;Name=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS mRNA 76 2068 . - . ID=g1620.t1;Parent=g1620;Name=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 1952 2068 . - . ID=g1620.t1.exon1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 1952 2068 . - 0 ID=cds.g1620.t1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 1641 1763 . - . ID=g1620.t1.exon2;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 1641 1763 . - 0 ID=cds.g1620.t1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 1330 1411 . - . ID=g1620.t1.exon3;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 1330 1411 . - 0 ID=cds.g1620.t1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 1010 1090 . - . ID=g1620.t1.exon4;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 1010 1090 . - 2 ID=cds.g1620.t1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 558 640 . - . ID=g1620.t1.exon5;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 558 640 . - 2 ID=cds.g1620.t1;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 76 250 . - . ID=g1620.t1.exon6;Parent=g1620.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 76 250 . - 0 ID=cds.g1620.t1;Parent=g1620.t1 #PROT g1620.t1 g1620 MQFRSVATKPIAGQKPGTSGLRKKVSVFMQQPYTENFVQSIFDAIPADRLSGSTLVIGGDGRYYLKEALQIIIKMAPANGVSKILVGQDGILSTPAVSCIVRRHKALGAIILTASHNPGGPNGDFGIKYNIENGGPAPEGITDKIYSASTKISEYKISDIPDVDLSVLGSTSFGDGKFTVDVIDSVDDYLSLMKEIFDFDSIRKYAQEGHFRLLMDCMNG # ORIGINAL: g1626.t1 original gene structure, not modified by PASA NODE_362_length_25964_cov_41.4367 AUGUSTUS gene 14046 14732 . - . ID=g1626;Name=g1626.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS mRNA 14046 14732 . - . ID=g1626.t1;Parent=g1626;Name=g1626.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS exon 14046 14732 . - . ID=g1626.t1.exon1;Parent=g1626.t1 NODE_362_length_25964_cov_41.4367 AUGUSTUS CDS 14046 14732 . - 0 ID=cds.g1626.t1;Parent=g1626.t1 #PROT g1626.t1 g1626 MEFESLWFPSSNEFVGRCYAMEIKPEPIDPSFSSLDELVIDYIAEANSVDIHNADLSQFWQTLDRCFPDDEGYLSPSIKSEADELEAPFSPDAGILSSPSTMLNDSDSSESVDGSSGHSAKRRRVCSETEDDEAEKRKVFICCFPGCTKRYGKNSHLKAHQRLHTGEKPYCCNWSGCNQRFTRSDELTRHRRKHSGVKPFKCDMCPKSFSRSDHLSSHIKRHTKPASK* # PASA_UPDATE: g2861.t1, single gene model update, valid-1, status:[pasa:asmbl_9070,status:12], valid-1 NODE_7261_length_454_cov_52.5699_potentialcontaminant . gene 1 454 . - . ID=g2861;Name=g2861.t1 NODE_7261_length_454_cov_52.5699_potentialcontaminant . mRNA 1 454 . - . ID=g2861.t1;Parent=g2861;Name=g2861.t1 NODE_7261_length_454_cov_52.5699_potentialcontaminant . five_prime_UTR 454 454 . - . ID=g2861.t1.utr5p1;Parent=g2861.t1 NODE_7261_length_454_cov_52.5699_potentialcontaminant . exon 1 454 . - . ID=g2861.t1.exon1;Parent=g2861.t1 NODE_7261_length_454_cov_52.5699_potentialcontaminant . CDS 1 453 . - 0 ID=cds.g2861.t1;Parent=g2861.t1;5_prime_partial=true;3_prime_partial=true #PROT g2861.t1 g2861 CSSDACIANVGLEVRTADSIVLPPGGRKRPLKVLAVQRSPVRIEEIADVIKDTLESHKLLGVHVDILLFPECFVADPVTVSVAVDGGVDGNGGDVVRALKTNPGIVRVSRVLRAHRTACLLGTFDEVHPSTNKTYCTSALFDVDGSLLGTY # ORIGINAL: g6203.t1 original gene structure, not modified by PASA NODE_499_length_22266_cov_38.0786 AUGUSTUS gene 9966 12563 . - . ID=g6203;Name=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS mRNA 9966 12563 . - . ID=g6203.t1;Parent=g6203;Name=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 11867 12563 . - . ID=g6203.t1.exon1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 11867 12563 . - 0 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 11645 11738 . - . ID=g6203.t1.exon2;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 11645 11738 . - 2 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 11422 11507 . - . ID=g6203.t1.exon3;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 11422 11507 . - 1 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 11174 11256 . - . ID=g6203.t1.exon4;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 11174 11256 . - 2 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 10832 10981 . - . ID=g6203.t1.exon5;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 10832 10981 . - 0 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 10322 10650 . - . ID=g6203.t1.exon6;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 10322 10650 . - 0 ID=cds.g6203.t1;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 9966 10167 . - . ID=g6203.t1.exon7;Parent=g6203.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 9966 10167 . - 1 ID=cds.g6203.t1;Parent=g6203.t1 #PROT g6203.t1 g6203 MADTTHAVSPQSDTDGGHAKLDIQQDSGVSNTPAELTRESSIEGQTPVSSTDGPSAPSARPESIVAYSQQSVSAADQTQSHIGVTSEYSPAAVVYPQLSTAAQPYTQPLPCAPPQFSEYTPQANAIDAQQQPQQPAYPGDPAHRPVTPAVVHPAPLPIAVAGPPAEPRVPGPVTTLDPNVDWALAHKVLATDIPSGDAGAASSEERFGIRRRFMRYLLVKPVTSDQLTPKGDKNGLKVEVADNPSKSTERLNAPMLQWNTVMRFKIRHNRNEGDDIPDVKVTASCKKLLFIPGFLGKTTLPKDTIAASAGRTVQQRVPFEDKDERRGTPLEKSRGFVTFSWHLTHKTADYARLYMKVPRFGLDEYIVTNFDHTPVFKVRGECTGEHKYRYVVSGLSGTMAGRTLAEIVPRLYAGNTWSSTWGFLVDGVEFASFSGDSCTNFTAMVSTKEGLQLRLQRTAFAPFYAYSLRHLSNDSDPAATFKFEGLLDQEEGLYMMDVAPADNPVLVLCVQVLLEHAHRAGRQLDAPKETRDLPILCDYDLKSFKA* # ORIGINAL: g6201.t1 original gene structure, not modified by PASA NODE_499_length_22266_cov_38.0786 AUGUSTUS gene 328 5536 . - . ID=g6201;Name=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS mRNA 328 5536 . - . ID=g6201.t1;Parent=g6201;Name=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 5396 5536 . - . ID=g6201.t1.exon1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 5396 5536 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 4706 5112 . - . ID=g6201.t1.exon2;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 4706 5112 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 4266 4347 . - . ID=g6201.t1.exon3;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 4266 4347 . - 1 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 3890 4017 . - . ID=g6201.t1.exon4;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 3890 4017 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 3454 3652 . - . ID=g6201.t1.exon5;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 3454 3652 . - 1 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 2998 3130 . - . ID=g6201.t1.exon6;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 2998 3130 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 2615 2770 . - . ID=g6201.t1.exon7;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 2615 2770 . - 2 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 2305 2388 . - . ID=g6201.t1.exon8;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 2305 2388 . - 2 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 1924 2042 . - . ID=g6201.t1.exon9;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 1924 2042 . - 2 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 1081 1677 . - . ID=g6201.t1.exon10;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 1081 1677 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS exon 328 725 . - . ID=g6201.t1.exon11;Parent=g6201.t1 NODE_499_length_22266_cov_38.0786 AUGUSTUS CDS 328 725 . - 0 ID=cds.g6201.t1;Parent=g6201.t1 #PROT g6201.t1 g6201 MPPPVRLAGGRGGGRMPPSMHAQSPQDSYNNGYGGGGGGRGAPGPISRGAPHMQQQQQQYHAESPYGTPISASSGHGHSAHSMHSMYSAHSAGSSASGFSGGAAYYGGMRHDSATSESSRSGVGVDGSWYGGSGSHVQGAYVGGSMHGGNVPGSRSGFWSFAEGSHSETPMEKDDSSVRVSIRVRPLNDTEQTRRDAQYVTCQPDGQTLEVLNMGSQKAKPFTFDSVLNEHASQEEVFERSGIKQLMHQATEGFSCTVFAFGQTGSGKTHTITGPDHPSDASLVGIIPRSFEYLFDIVAARPDVRFTLRACYLEVYNEQVKDLLNPSSTSLPVRWAAGRGFYVENLFVVECEVIDDMIAVLEEGLQNRRTAAHNLNEHSSRSHSMMTITIDTETIDPDDGRLVQKNGKISFVDLAGSEKVKESKSAGDQLTETQNINKSLLTLGQCISALGDMKKRNGHIPYRDSKLTKLLADSLGGNGYTLMIACITPSAHAIAETINTLRYAYRAKRIKNKPVLQMDPRERLIGALKKEVKHLRQENNYLRSQFDPNAIMSVRNTPGPPTPHNGRLSISGNPGAVVPYGSPGSVNGSMMNVAAMGMGMGMDAMGGMGGMGGGMGGVGASSSVPVPMRSDPQEVLQSMGGYGKSSEQLKTARRMLREYMEDNDVLRGENAELMRSKERFDQEYQEVMRENEKLHSKLLHLEKVFLDSGSTTTHTMAGGGASIDHGLAASRLGLRRAFDKSENMLNLLHAEGRFSKLNLLNVGVAGGAGSNPARDKDKKKKGHGGNDDDEEDGDDVIVDTSPAKSKPAGAATGR # PASA_UPDATE: g6204.t1, single gene model update, valid-1, status:[pasa:asmbl_7768,status:3], valid-1 NODE_499_length_22266_cov_38.0786 . gene 13238 16289 . - . ID=g6204;Name=g6204.t1 NODE_499_length_22266_cov_38.0786 . mRNA 13238 16289 . - . ID=g6204.t1;Parent=g6204;Name=g6204.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 16249 16289 . - . ID=g6204.t1.utr5p1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 16186 16289 . - . ID=g6204.t1.exon1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 16186 16248 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 15876 15953 . - . ID=g6204.t1.exon2;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 15876 15953 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 15411 15639 . - . ID=g6204.t1.exon3;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 15411 15639 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 14882 15234 . - . ID=g6204.t1.exon4;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 14882 15234 . - 2 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 14589 14676 . - . ID=g6204.t1.exon5;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 14589 14676 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 13946 14337 . - . ID=g6204.t1.exon6;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 13946 14337 . - 2 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 13542 13667 . - . ID=g6204.t1.exon7;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 13542 13667 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . exon 13238 13331 . - . ID=g6204.t1.exon8;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . CDS 13257 13331 . - 0 ID=cds.g6204.t1;Parent=g6204.t1 NODE_499_length_22266_cov_38.0786 . three_prime_UTR 13238 13256 . - . ID=g6204.t1.utr3p1;Parent=g6204.t1 #PROT g6204.t1 g6204 MRGGEKSTAVETGLVVFEADKADSYDKDMWDDAALIKAYNAAVASFKPCGAGGNSGSSLVDAMDADCGGNDSDDAMTHLQRIAGSKRTMGVSSWKEGDVCRAVYEEDGLRYDAVIKEMHEDDDELTCTVLFLDYGNVATVRARTLRAITNAADIEAAKEKAVAMLESDDDDVDDDVDDNQDASDDADGGDDALEDEDDGSNGADGTAIKSLGKHVIRLRHADDVDAPVGHPGDRGRLGDSSRWNEGDHVLAVFSGDGLVYPGTVEKVLKDGCVVVFEGYGNTDFVSSDSIWTHNSAQHEQQHQQQSNNTPHAHPRSIHSHAAHRHTHESHAHGHAESHLRSHTHRRTHWHGCNHLRDRREGLPHRSHTGGHYTVHAQGHKHSHTHVQSEFKRGAAHSHAHSTPTQSHGTQDVALPPFPPGVDAHTRDLLSSWFYTGFYAGQYAAAQQQQQHRGSAAKRRRMMDSDDD* # PASA_UPDATE: g6202.t1, single gene model update, valid-1, status:[pasa:asmbl_7766,status:3], valid-1 NODE_499_length_22266_cov_38.0786 . gene 6333 9842 . + . ID=g6202;Name=g6202.t1 NODE_499_length_22266_cov_38.0786 . mRNA 6333 9842 . + . ID=g6202.t1;Parent=g6202;Name=g6202.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 6333 6538 . + . ID=g6202.t1.utr5p1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 6965 7068 . + . ID=g6202.t1.utr5p2;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 7260 7521 . + . ID=g6202.t1.utr5p3;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 6333 6538 . + . ID=g6202.t1.exon1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 6965 7068 . + . ID=g6202.t1.exon2;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 7260 7777 . + . ID=g6202.t1.exon3;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 7522 7777 . + 0 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 8037 8140 . + . ID=g6202.t1.exon4;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 8037 8140 . + 2 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 8460 8566 . + . ID=g6202.t1.exon5;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 8460 8566 . + 0 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 8785 8835 . + . ID=g6202.t1.exon6;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 8785 8835 . + 1 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 9253 9539 . + . ID=g6202.t1.exon7;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 9253 9539 . + 1 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . exon 9692 9842 . + . ID=g6202.t1.exon8;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . CDS 9692 9807 . + 2 ID=cds.g6202.t1;Parent=g6202.t1 NODE_499_length_22266_cov_38.0786 . three_prime_UTR 9808 9842 . + . ID=g6202.t1.utr3p1;Parent=g6202.t1 #PROT g6202.t1 g6202 MGLHTGIRMLTTLTMQLHTWHTPTPTNVQRKRKLAYDFTAKRPAKRAKVGRPPKGSTKQTETIVGETEEDRRKREAAAAERRARRAAEAEASGVRKSQRSSAIERDVEYRRKAEERAEKKKGKYKRSESFTQKLTQEELLKEAEETAVVNVGDLDRYLRMEDERRKNRNERPRYVGPAVRFLSTSKWTHTTHTTHTEGGESAGSANHSATSALPSEGVAPAPGEGPSASDARVASAVASAPLERVCRNFITFPSEELLPSLFTSTRPIEHKPSLCTITGLPAKYKDPLSGRPYATADAFKMIRSEG* # PASA_UPDATE: g6205.t1, single gene model update, valid-1, status:[pasa:asmbl_7767,status:12], valid-1 NODE_499_length_22266_cov_38.0786 . gene 16571 22119 . + . ID=g6205;Name=g6205.t1 NODE_499_length_22266_cov_38.0786 . mRNA 16571 22119 . + . ID=g6205.t1;Parent=g6205;Name=g6205.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 16571 16683 . + . ID=g6205.t1.utr5p1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . five_prime_UTR 16964 16999 . + . ID=g6205.t1.utr5p2;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 16571 16683 . + . ID=g6205.t1.exon1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 16964 17087 . + . ID=g6205.t1.exon2;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 17000 17087 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 17367 17411 . + . ID=g6205.t1.exon3;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 17367 17411 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 17690 17893 . + . ID=g6205.t1.exon4;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 17690 17893 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 18253 18354 . + . ID=g6205.t1.exon5;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 18253 18354 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 18913 19065 . + . ID=g6205.t1.exon6;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 18913 19065 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 19336 19460 . + . ID=g6205.t1.exon7;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 19336 19460 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 19696 19899 . + . ID=g6205.t1.exon8;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 19696 19899 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 20042 20088 . + . ID=g6205.t1.exon9;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 20042 20088 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 20333 20395 . + . ID=g6205.t1.exon10;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 20333 20395 . + 1 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 20726 20798 . + . ID=g6205.t1.exon11;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 20726 20798 . + 1 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 20977 21094 . + . ID=g6205.t1.exon12;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 20977 21094 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 21395 21537 . + . ID=g6205.t1.exon13;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 21395 21537 . + 2 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 21721 21819 . + . ID=g6205.t1.exon14;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 21721 21819 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . exon 22048 22119 . + . ID=g6205.t1.exon15;Parent=g6205.t1 NODE_499_length_22266_cov_38.0786 . CDS 22048 22119 . + 0 ID=cds.g6205.t1;Parent=g6205.t1 #PROT g6205.t1 g6205 MKIVDKIRAMEEHGKPFYSFEFFPPKTTQGLANLYERIDRMALLNPLFVDVTWAADGSQSEAALELCVAARALCGFDMMLHLTCTNTSEEHVRKTLDRAKAEGISNILALRGDPPLQTEGAAFVHAIDLVKFIRAEYGDHFGIAVAGYPEAHPNSRSYADDLRHLREKIEAGADFVISQMFFDADIFVQFVADCRAIGITCPVVAGLMPISTYQQFVRVTSLAHVVVPDFIMEALQEIKSDDEAVRRYGVDLFSGMVSRLAEGGVKGLHFYTMNLERPVAEILARVGSLCGAPEIQQSPTMQRSSPWAHSRLRAGEDVRPIFWRHRPKSYLMRTEDWDEFPNGRWGDLRSPAYGELSDHYLLTLHGAQNIAKYCPAPESFSDIRDVFVGHVTGTVPFLPWCPQPLSSESGHIHDDLVAMNKRGFLTINSQPSVNGLPSSDVDFGWGPAHGRVYQKAYVEFFCSPENFELFVKEARNFASLQYHAVNCRGEHVSYRSERITAVTWGVFPGEC* # PASA_UPDATE: g8932.t1, single gene model update, valid-1, status:[pasa:asmbl_7920,status:12], valid-1 NODE_5197_length_973_cov_27.2194 . gene 81 820 . - . ID=g8932;Name=g8932.t1 NODE_5197_length_973_cov_27.2194 . mRNA 81 820 . - . ID=g8932.t1;Parent=g8932;Name=g8932.t1 NODE_5197_length_973_cov_27.2194 . five_prime_UTR 587 820 . - . ID=g8932.t1.utr5p1;Parent=g8932.t1 NODE_5197_length_973_cov_27.2194 . exon 535 820 . - . ID=g8932.t1.exon1;Parent=g8932.t1 NODE_5197_length_973_cov_27.2194 . CDS 535 586 . - 0 ID=cds.g8932.t1;Parent=g8932.t1 NODE_5197_length_973_cov_27.2194 . exon 81 228 . - . ID=g8932.t1.exon2;Parent=g8932.t1 NODE_5197_length_973_cov_27.2194 . CDS 81 228 . - 2 ID=cds.g8932.t1;Parent=g8932.t1;3_prime_partial=true #PROT g8932.t1 g8932 MLSQGLYVMMNGGGAYAKTAHWLPPIMTVLFLISLPFWIKLARRDVAVAKVLRTGWAPVLTAMMIS # PASA_UPDATE: g11771.t1, single gene model update, valid-1, status:[pasa:asmbl_5330,status:12],[pasa:asmbl_5331,status:12], valid-1 NODE_2974_length_4623_cov_40.5077 . gene 1789 3507 . - . ID=g11771;Name=g11771.t1 NODE_2974_length_4623_cov_40.5077 . mRNA 1789 3507 . - . ID=g11771.t1;Parent=g11771;Name=g11771.t1 NODE_2974_length_4623_cov_40.5077 . five_prime_UTR 3352 3507 . - . ID=g11771.t1.utr5p1;Parent=g11771.t1 NODE_2974_length_4623_cov_40.5077 . exon 1789 3507 . - . ID=g11771.t1.exon1;Parent=g11771.t1 NODE_2974_length_4623_cov_40.5077 . CDS 1891 3351 . - 0 ID=cds.g11771.t1;Parent=g11771.t1 NODE_2974_length_4623_cov_40.5077 . three_prime_UTR 1789 1890 . - . ID=g11771.t1.utr3p1;Parent=g11771.t1 #PROT g11771.t1 g11771 MASQSQISFSSLPVEVVVCGIVPFVSEKDLASLASVNSRLRCVLKRVHLYTLRNEFGMQYCESAAFRNAVWADIPRERLVLNLEGARIDGDVSVLGGVHTLDLSYCDGVTHVSALGGVHSLNLRGCNGVRDVSALGGVHSLNLRCCNGVTDVSALGGVHSLNLSGCRGVADVSALGGVHSVYLDDCYGVVDVSVLGGVHSLDISHCNGVTDVSALGGIHSLNLNGCNRVTDLSALGGVHSLNLSYCAGVTDVSMLGGIRSLNLCRCNGVNDVSALGGVHSLNLSYCCRVTNVSALGGVHSLYLNGCNGVTDVSALGGVYSLNLDGCNGVTDVSSLGDVHSLSLSHCNGVRDVSALGKVHSLNISGCNGVTDVSALGGVHSLNLTLCQGVSDVSALRALHSLDVSGCGGVSDVSALGGLYCLNLSSCYGVTDVSALGRVHSLNLSRCRGVPDVSALRGVHSLNLSCCYQVMDVSSLGAVHSLDLAKM* # PASA_UPDATE: g6214.t1, single gene model update, valid-1, status:[pasa:asmbl_7401,status:12], valid-1 NODE_4515_length_1515_cov_38.5125 . gene 247 554 . - . ID=g6214;Name=g6214.t1 NODE_4515_length_1515_cov_38.5125 . mRNA 247 554 . - . ID=g6214.t1;Parent=g6214;Name=g6214.t1 NODE_4515_length_1515_cov_38.5125 . five_prime_UTR 366 554 . - . ID=g6214.t1.utr5p1;Parent=g6214.t1 NODE_4515_length_1515_cov_38.5125 . exon 247 554 . - . ID=g6214.t1.exon1;Parent=g6214.t1 NODE_4515_length_1515_cov_38.5125 . CDS 247 365 . - 0 ID=cds.g6214.t1;Parent=g6214.t1;3_prime_partial=true #PROT g6214.t1 g6214 MNAITGAMFSNKFDSFTKDLGFDEDDDDKKKKNDDDDDE # PASA_UPDATE: g6215.t1, single gene model update, valid-1, status:[pasa:asmbl_7402,status:12], valid-1 NODE_4515_length_1515_cov_38.5125 . gene 810 1278 . - . ID=g6215;Name=g6215.t1 NODE_4515_length_1515_cov_38.5125 . mRNA 810 1278 . - . ID=g6215.t1;Parent=g6215;Name=g6215.t1 NODE_4515_length_1515_cov_38.5125 . five_prime_UTR 1278 1278 . - . ID=g6215.t1.utr5p1;Parent=g6215.t1 NODE_4515_length_1515_cov_38.5125 . exon 810 1278 . - . ID=g6215.t1.exon1;Parent=g6215.t1 NODE_4515_length_1515_cov_38.5125 . CDS 1089 1277 . - 0 ID=cds.g6215.t1;Parent=g6215.t1;5_prime_partial=true NODE_4515_length_1515_cov_38.5125 . three_prime_UTR 810 1088 . - . ID=g6215.t1.utr3p1;Parent=g6215.t1 #PROT g6215.t1 g6215 IKGFEFIKGIIVEGEPFAVENDLLTPTFKLRRPNATNKYKAELEKLYEVVELEMAKNAKPEA* # ORIGINAL: g5364.t1 original gene structure, not modified by PASA NODE_700_length_18881_cov_47.6764 AUGUSTUS gene 156 6155 . + . ID=g5364;Name=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS mRNA 156 6155 . + . ID=g5364.t1;Parent=g5364;Name=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 156 404 . + . ID=g5364.t1.exon1;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 156 404 . + 0 ID=cds.g5364.t1;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 548 1237 . + . ID=g5364.t1.exon2;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 548 1237 . + 0 ID=cds.g5364.t1;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 1737 1895 . + . ID=g5364.t1.exon3;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 1737 1895 . + 0 ID=cds.g5364.t1;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 2383 5659 . + . ID=g5364.t1.exon4;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 2383 5659 . + 0 ID=cds.g5364.t1;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 5977 6155 . + . ID=g5364.t1.exon5;Parent=g5364.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 5977 6155 . + 2 ID=cds.g5364.t1;Parent=g5364.t1 #PROT g5364.t1 g5364 MAAVDGTQQAPGAVPAQPPKPIYYKETPQFKFHSLARLDVPGRCSCCESYTYFQGMRCARCGIAVHRKCIDKLTLASGATQCQPLTASSDTMDLKKKMDSGKKGDRALRLFGVDLAKVVEGRSIPLVVEKCSREVEARGLDMVGMYRIAGVKSSIERTCQLLESDAENANLASQSDIHVVGDVLKLFIRQLPEPLLPFSVYDEFVRIADVADDRSAVVAGLRAVFEKIPEANKKTLEYLIAHLRKVADNSEINQMRVGNLGIVFGPTLLRSPHDAMAALMDMPRQAKAVELLITCADALSGKTPRVSLGGLSESPLQLREDRGMETVVIKRGSIESPSRWFGRRSSSSKEEDETAKAVRILNEEREEEHVREMRLSSLAEESFMPSSSDVRRHTIGEAQDVMDKSFSSRLGSSQSHSQVHTHAKAAERARKEKELLAALAAVSEASHVTGTHETGVQADASLVMRAAQVQRLSVDREIEKMGSVEDERRALEMESIALRERKELAVVQREKERKREQREKERDKERDKERDKEREKEARKERDAAAVMVSEQPLSTVAEAEAEAVEDRVLAENRRVLEFERIAETTEDSFPLDAHEQAPHSALGPTATVDKQPTAIDDKQSTATVDVEDNSHGAVVAADVDHVIAAHSAASGVITAASGVTTATLIDNERSVAVESVDGGLQREAEGVRKSDADTGARLIRTDAVVDGSAVAAALWEETPVNTNSPTHNNTNTNTTITTITYKDDEDKDTDGISRDDFAQHADVSSTPTTTHMHSAWSHARTEPRSSYRQHTCVCGHRSKFRCSPCRTRTYCSRECQAADWVHHRPECAWRSPKPHQHDHAADGVVGGVAATPPTPTQMLFPPASPMTSSSAATPARWTPMRDHGTAATNINREGSLSRDGNVQNCTEYSTVDTADDGLSTDRASAANLNASALARLDRAFESLTEGTASESESSEHDAHRAARTRVHARTHAHVRVHSELPEEATVAALARLDKALFSFEGADSARDSPALMHADDDALAAIGHPLPIDVHDVTLNAQTDALARLESALALFVESERATPEALATIAPDAHIPNNQSEPRHDHSGDQLCRGSESDYPSESAASAIAMLDETIASFAPAASGPSTVPSSPAVPRDSAPPLRSTAPTPAAWSKATAGALAAISNDAVSSPPRWRTSIPPSPSGAHVMPDDSGRDHAPVTPPHGPTIGIGAVSLLATPQKSANPSSISGLTLLGDGGDAAVGHAARDAGGLVRGGDLDGSHDEYNGDEDGDGDGLTSPVSRDFDTIEEVDELSDSEEAMLRNVLSASVTCVAEAIADDDTAPRDATPVMSGSGADVHGQREERDGRGDHPRNRRLDADKVADKVAEVQKSSSQESVVEIPRNELVEPGAPRESAPRMDMLSIAPIPIAIRGAEALELLDYRRPVASFGQQEQLQMLWEASLRVLNESQRALLEYKPIGVPEFPGGLARARHAHKARNTAELSFAKGDVIRVTARMNRHWLEGELNGAMGIVPVRFLRPV* # PASA_UPDATE: g5366.t1, single gene model update, valid-1, status:[pasa:asmbl_8960,status:12], valid-1 NODE_700_length_18881_cov_47.6764 . gene 8912 13391 . + . ID=g5366;Name=g5366.t1 NODE_700_length_18881_cov_47.6764 . mRNA 8912 13391 . + . ID=g5366.t1;Parent=g5366;Name=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 8912 8946 . + . ID=g5366.t1.exon1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 8912 8946 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 9209 9318 . + . ID=g5366.t1.exon2;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 9209 9318 . + 1 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 9601 9707 . + . ID=g5366.t1.exon3;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 9601 9707 . + 2 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 9903 10013 . + . ID=g5366.t1.exon4;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 9903 10013 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 10267 10419 . + . ID=g5366.t1.exon5;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 10267 10419 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 10756 11436 . + . ID=g5366.t1.exon6;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 10756 11436 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 11662 12042 . + . ID=g5366.t1.exon7;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 11662 12042 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 12359 12491 . + . ID=g5366.t1.exon8;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 12359 12491 . + 0 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . exon 13070 13391 . + . ID=g5366.t1.exon9;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . CDS 13070 13191 . + 2 ID=cds.g5366.t1;Parent=g5366.t1 NODE_700_length_18881_cov_47.6764 . three_prime_UTR 13192 13391 . + . ID=g5366.t1.utr3p1;Parent=g5366.t1 #PROT g5366.t1 g5366 MASSGHGDGGGGYLKAGGQPKNVILLLSEGYRGFAQMCQLVMEWLRMTGASDDDIRGIVDGYIRDITTKTFDKEKADSIFKSDSLSPPWLDAMVANKTWRALIYELWETHTDCLFINLAIKKIVDLGWESEITDVASAGTDAALYGRVLGDAIQRLLEAGEEDLKVELPRIVKLACQSEQAFLCAQAVLASLQRTHRNGRRVKRIFQCIGEGARQSGASDALVRNSSLLLMGASRHPHLMAAVGSILSTKSASPADVSMLFQCYDGATQAKPAPPAELVRLPGVFEALVESLFDPRKTVNANYKKRYFRVLAIASNVHDWDESLSASSLTSGGVGAPVSQHYGYGPTSQQRRLDSTEAQRRAEEHKKAVGELIDATETAITAAYDIVHGDPLRADWSSEIPNLFASLGHPVAAMGLLHWVSVTFEDAALLASALHETSNAPHFAVIDEAGRLHPRVRTACLSLIAALHDKERVIDVDLAPKYRIVLADRLVHLVWSGHVMPVLRWVAMASAGRKMDASALSYFVGEVLLLSDPPYSAPFASAILELMVAMSAASDVPTSGDVGQAFASFIDACMNDNMEQFVSRELADFLLRMHQRYSTITGIHRKMDES* # PASA_UPDATE: g5365.t1, single gene model update, valid-1, status:[pasa:asmbl_8961,status:12], valid-1 NODE_700_length_18881_cov_47.6764 . gene 6695 8671 . - . ID=g5365;Name=g5365.t1 NODE_700_length_18881_cov_47.6764 . mRNA 6695 8671 . - . ID=g5365.t1;Parent=g5365;Name=g5365.t1 NODE_700_length_18881_cov_47.6764 . five_prime_UTR 8618 8671 . - . ID=g5365.t1.utr5p1;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . exon 8382 8671 . - . ID=g5365.t1.exon1;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . CDS 8382 8617 . - 0 ID=cds.g5365.t1;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . exon 7348 8068 . - . ID=g5365.t1.exon2;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . CDS 7510 8068 . - 1 ID=cds.g5365.t1;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . exon 6695 7233 . - . ID=g5365.t1.exon3;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . three_prime_UTR 7348 7509 . - . ID=g5365.t1.utr3p1;Parent=g5365.t1 NODE_700_length_18881_cov_47.6764 . three_prime_UTR 6695 7233 . - . ID=g5365.t1.utr3p2;Parent=g5365.t1 #PROT g5365.t1 g5365 MARSEQSSVSWPQLLVGGDATSLVLSADHGNCALVVLNQPLLRPLDAFRAIWNGSSFRVCADGGTNRLYDELVAVERTSFVPNVITGDLDSLRAEVRDYYSSLGSRVVQDHSQDRNDFQKALYSVALVAMETGRRFDSIIVVGGLTGRFDHTMSSLHMLYLQSNLVAGSESGGSHALSAYDDVDDGVKAAVRGLSECQMTLVCDDSYVTLLRPRVKNIIHINRRWEGPTCGFIPMGAPARHVTTGGMRWNVGEPLLCGCMYICA* # ORIGINAL: g5367.t1 original gene structure, not modified by PASA NODE_700_length_18881_cov_47.6764 AUGUSTUS gene 14091 14957 . + . ID=g5367;Name=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS mRNA 14091 14957 . + . ID=g5367.t1;Parent=g5367;Name=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 14091 14187 . + . ID=g5367.t1.exon1;Parent=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 14091 14187 . + 0 ID=cds.g5367.t1;Parent=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 14379 14605 . + . ID=g5367.t1.exon2;Parent=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 14379 14605 . + 2 ID=cds.g5367.t1;Parent=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS exon 14844 14957 . + . ID=g5367.t1.exon3;Parent=g5367.t1 NODE_700_length_18881_cov_47.6764 AUGUSTUS CDS 14844 14957 . + 0 ID=cds.g5367.t1;Parent=g5367.t1 #PROT g5367.t1 g5367 MSGKVVVVTGGDTGMGMEIAVVMAGLGARVVLACLPNVAARAVADIRLRSRSSFVDAIPVDLSSTSSVKEFAATFLNRYSTLSVLINNAGVMFERRTMCKNGIDMHVQVNYLGHHLLTSLLLPTMESTRGDRRIVNVSSRAHLSG* # ORIGINAL: g2692.t1 original gene structure, not modified by PASA NODE_7146_length_466_cov_91.0486_potentialcontaminant AUGUSTUS gene 2 466 . + . ID=g2692;Name=g2692.t1 NODE_7146_length_466_cov_91.0486_potentialcontaminant AUGUSTUS mRNA 2 466 . + . ID=g2692.t1;Parent=g2692;Name=g2692.t1 NODE_7146_length_466_cov_91.0486_potentialcontaminant AUGUSTUS exon 2 466 . + . ID=g2692.t1.exon1;Parent=g2692.t1 NODE_7146_length_466_cov_91.0486_potentialcontaminant AUGUSTUS CDS 2 466 . + 1 ID=cds.g2692.t1;Parent=g2692.t1 #PROT g2692.t1 g2692 LECQGPYLGSPHPNTILTSAGETCTDCGLELCANYVSTYRDLTERVSPPLPPWLTGSKRAIKDKREIMDVMDKLELPGQKDNACAYYDSLFSSEGSSRGPHMEERRQAVKALCAIAAVREDYVVNEELVAYMFGAEDMDLDAARKYISERHKTL # PASA_UPDATE: g13799.t1, single gene model update, valid-1, status:[pasa:asmbl_4790,status:12], valid-1 NODE_2680_length_5466_cov_39.7908 . gene 3326 5292 . + . ID=g13799;Name=g13799.t1 NODE_2680_length_5466_cov_39.7908 . mRNA 3326 5292 . + . ID=g13799.t1;Parent=g13799;Name=g13799.t1 NODE_2680_length_5466_cov_39.7908 . five_prime_UTR 3326 3514 . + . ID=g13799.t1.utr5p1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . exon 3326 3654 . + . ID=g13799.t1.exon1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . CDS 3515 3654 . + 0 ID=cds.g13799.t1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . exon 3785 4042 . + . ID=g13799.t1.exon2;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . CDS 3785 4042 . + 1 ID=cds.g13799.t1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . exon 4223 4377 . + . ID=g13799.t1.exon3;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . CDS 4223 4377 . + 1 ID=cds.g13799.t1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . exon 4687 4877 . + . ID=g13799.t1.exon4;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . CDS 4687 4877 . + 2 ID=cds.g13799.t1;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . exon 5167 5292 . + . ID=g13799.t1.exon5;Parent=g13799.t1 NODE_2680_length_5466_cov_39.7908 . CDS 5167 5292 . + 0 ID=cds.g13799.t1;Parent=g13799.t1;3_prime_partial=true #PROT g13799.t1 g13799 MVSSVLITGDSNGIILSVSSKCSEIFGYTSDEILGHNLSMLMPPPFNKLHDQFIERFKRTGEAHIIGSSRIVEGLHKDGSIVPIRLSVSHVALDNDHLFIGLMEKMDDKTAKIAIDAKGLILSVNNLCSEMFGYTARELVGSNVSVLMPDEIARSHDGYMHRHAETGHSKVLNRMRNLTGKKKDGHLFPITLKAVPTQMPDGTIMYQAEILDMGGDGYTAVFTCDASGTVSAVSANLLPFFGLKAPTEIVGHHFRVLFPDSQSDDRFSTDGRVRALALHSDGSRIEVHVE # PASA_UPDATE: g13798.t1, single gene model update, valid-1, status:[pasa:asmbl_4788,status:8],[pasa:asmbl_4789,status:3], valid-1 NODE_2680_length_5466_cov_39.7908 . gene 483 1888 . + . ID=g13798;Name=g13798.t1 NODE_2680_length_5466_cov_39.7908 . mRNA 483 1888 . + . ID=g13798.t1;Parent=g13798;Name=g13798.t1 NODE_2680_length_5466_cov_39.7908 . five_prime_UTR 483 512 . + . ID=g13798.t1.utr5p1;Parent=g13798.t1 NODE_2680_length_5466_cov_39.7908 . exon 483 707 . + . ID=g13798.t1.exon1;Parent=g13798.t1 NODE_2680_length_5466_cov_39.7908 . CDS 513 707 . + 0 ID=cds.g13798.t1;Parent=g13798.t1 NODE_2680_length_5466_cov_39.7908 . exon 870 1888 . + . ID=g13798.t1.exon2;Parent=g13798.t1 NODE_2680_length_5466_cov_39.7908 . CDS 870 1652 . + 0 ID=cds.g13798.t1;Parent=g13798.t1 NODE_2680_length_5466_cov_39.7908 . three_prime_UTR 1653 1888 . + . ID=g13798.t1.utr3p1;Parent=g13798.t1 #PROT g13798.t1 g13798 MARMCAYALVAVAFFATVSLVLSAPTANACTQAGPFLYVSFHGGSGSSDVNQVYKYTRNGCLVSTTVLDGGNQIELRSMHILNGQLLVANSYQYDSRILTYGACASDGSRPFLGNFTVETDASNPGMVHPYGVTADPSGNVYVSSQDTDLVSRYYGSASSNHGMPMPSLSSDGFPGTFVRLSKSKTGIRDIEFEASTSLLYIASEDDDAVLVYDTRTGKSVDSIKATKPIGLFLDEAARVLYIGSEDNSDSLVSAYSLDKGKVTTTFSQKGLTHPAGITAYDGTLYVVGQDSLAIYSFDISTGKYLTKIVTDLPDSPEQITLSPC* # ORIGINAL: g6662.t1 original gene structure, not modified by PASA NODE_4102_length_2180_cov_38.0969 AUGUSTUS gene 739 1281 . - . ID=g6662;Name=g6662.t1 NODE_4102_length_2180_cov_38.0969 AUGUSTUS mRNA 739 1281 . - . ID=g6662.t1;Parent=g6662;Name=g6662.t1 NODE_4102_length_2180_cov_38.0969 AUGUSTUS exon 739 1281 . - . ID=g6662.t1.exon1;Parent=g6662.t1 NODE_4102_length_2180_cov_38.0969 AUGUSTUS CDS 739 1281 . - 0 ID=cds.g6662.t1;Parent=g6662.t1 #PROT g6662.t1 g6662 MPLHRTTLRQHMHLHLVLPCAEGLQHKQCLLYAAFLQDADCPRYAEGRRYAVCPPYAEGLHDAGLPNYVECSPYAEGLRHAEGLHEACLPNYADCPPYAEGLRHAEGLHEACLPNYADCPPYAEGLRHAEGLHEACLPNYADCPPYAEGRRYAEGRPDAGLLPDAEDRSEDHLGHPRAAV* # ORIGINAL: g10808.t1 original gene structure, not modified by PASA NODE_3407_length_3539_cov_38.4001 AUGUSTUS gene 178 1566 . + . ID=g10808;Name=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS mRNA 178 1566 . + . ID=g10808.t1;Parent=g10808;Name=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS exon 178 291 . + . ID=g10808.t1.exon1;Parent=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS CDS 178 291 . + 0 ID=cds.g10808.t1;Parent=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS exon 496 565 . + . ID=g10808.t1.exon2;Parent=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS CDS 496 565 . + 0 ID=cds.g10808.t1;Parent=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS exon 830 1566 . + . ID=g10808.t1.exon3;Parent=g10808.t1 NODE_3407_length_3539_cov_38.4001 AUGUSTUS CDS 830 1566 . + 2 ID=cds.g10808.t1;Parent=g10808.t1 #PROT g10808.t1 g10808 RVLGRLHQYRVIARNCSQGLLVCRVPFTHPRHIFPLLQLLRQQLVFNHLFISACGGDRDFVDPIGGAIDDVYEISAVAPSSIAITMPDPTQPGLACVHISIAPGGVIAASLRRPHSLTMHPLGSRAAVKSENDGNSGSSSGNSSSGDDEVVNRKLSATLQRTLSIPLSLCELCGVDPSAADSTIANTCAHGAPEHVRQSQSASNGDAIDVFDCGENGLRKNVSECDLSRDNSRAGSVDPKDDGRLLHPGHPQHAPAPDRRRGQGASTAGAATPIKSEDGFKMESADASDATPRRRSARESKRKRDE* # ORIGINAL: g3135.t1 original gene structure, not modified by PASA NODE_5076_length_1037_cov_100.559_potentialcontaminant AUGUSTUS gene 31 1037 . - . ID=g3135;Name=g3135.t1 NODE_5076_length_1037_cov_100.559_potentialcontaminant AUGUSTUS mRNA 31 1037 . - . ID=g3135.t1;Parent=g3135;Name=g3135.t1 NODE_5076_length_1037_cov_100.559_potentialcontaminant AUGUSTUS exon 31 1037 . - . ID=g3135.t1.exon1;Parent=g3135.t1 NODE_5076_length_1037_cov_100.559_potentialcontaminant AUGUSTUS CDS 31 1037 . - 1 ID=cds.g3135.t1;Parent=g3135.t1 #PROT g3135.t1 g3135 DMQPPPSRSLDVETLSEEDGSVGLSDVQTNEESATVESAPASHGGAVVGDAPLLVPSFSRDGVLCDANVSTDFMYSEMTDDGNGDLESDVSLLEDCADALPANNNNNNSKNNNNNNNNSNNNNNDNNDNNDNNDNLSIDIHDLSDNSLADLSLDEEACATDADEFDQLFLPADIETALGVAAQSGSHGRTKHASVPTETAKWPTNISLLAAELKSAIKSAKEERAAHEEPTLPYPYAQSAGSSFSERFDSREEVVPSDSEFDDDEMEFLHATAGFQGEGVTGFHGAGVDAADSVYPHDDDNDWGGVFHDALTARAAAAFGLRLRHVPIDAILDAR # PASA_UPDATE: g10436.t1, single gene model update, valid-1, status:[pasa:asmbl_7238,status:12], valid-1 NODE_4343_length_1779_cov_34.6995 . gene 245 1491 . + . ID=g10436;Name=g10436.t1 NODE_4343_length_1779_cov_34.6995 . mRNA 245 1491 . + . ID=g10436.t1;Parent=g10436;Name=g10436.t1 NODE_4343_length_1779_cov_34.6995 . five_prime_UTR 245 245 . + . ID=g10436.t1.utr5p1;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . exon 245 398 . + . ID=g10436.t1.exon1;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . CDS 246 398 . + 0 ID=cds.g10436.t1;Parent=g10436.t1;5_prime_partial=true NODE_4343_length_1779_cov_34.6995 . exon 611 688 . + . ID=g10436.t1.exon2;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . CDS 611 688 . + 0 ID=cds.g10436.t1;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . exon 842 1491 . + . ID=g10436.t1.exon3;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . CDS 842 967 . + 0 ID=cds.g10436.t1;Parent=g10436.t1 NODE_4343_length_1779_cov_34.6995 . three_prime_UTR 968 1491 . + . ID=g10436.t1.utr3p1;Parent=g10436.t1 #PROT g10436.t1 g10436 YPPFFDDNPFGIYEKILAGKVQFPAHFESNAKDLVKKLLTADRTKRLGNLKSGAEDLRKHKWFKGIDWTMLQNRQVPAPIVPEVAHEGDTRNFEKYPEQVEEFSGPSVDPFKNLFKDF* # ORIGINAL: g6397.t1 original gene structure, not modified by PASA NODE_3915_length_2521_cov_40.1488 AUGUSTUS gene 492 1396 . - . ID=g6397;Name=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS mRNA 492 1396 . - . ID=g6397.t1;Parent=g6397;Name=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS exon 1312 1396 . - . ID=g6397.t1.exon1;Parent=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS CDS 1312 1396 . - 0 ID=cds.g6397.t1;Parent=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS exon 703 808 . - . ID=g6397.t1.exon2;Parent=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS CDS 703 808 . - 2 ID=cds.g6397.t1;Parent=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS exon 492 550 . - . ID=g6397.t1.exon3;Parent=g6397.t1 NODE_3915_length_2521_cov_40.1488 AUGUSTUS CDS 492 550 . - 1 ID=cds.g6397.t1;Parent=g6397.t1 #PROT g6397.t1 g6397 MSVPKFRKDHSVWINIAEAKNLDSSIAEDALNTYVCVKINKREKDRTKTVKKNRTPLWNDDFYFNLNDEFKDLALVVWNEKKQ # ORIGINAL: g4486.t1 original gene structure, not modified by PASA NODE_3677_length_2973_cov_35.9714 AUGUSTUS gene 1454 2215 . - . ID=g4486;Name=g4486.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS mRNA 1454 2215 . - . ID=g4486.t1;Parent=g4486;Name=g4486.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS exon 1454 2215 . - . ID=g4486.t1.exon1;Parent=g4486.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS CDS 1454 2215 . - 0 ID=cds.g4486.t1;Parent=g4486.t1 #PROT g4486.t1 g4486 MRGALRPLGASKQPDMAPIPGVAPSATAAPSTAVATGGDSVLRLLRRAYGAPSLSASGRRASTGALRVVSLGTIKRRDSTDGLSISQLGCDSGGKHFAGLGVDDALASLSIADDNTPMARTLASAESMCRRRHDASLATLGGLGGDRGSAHTRPLESAFMRCALSEKREAFRLSIPTEEDWAQLWDALLRNTSPPFCDHDLGRASPPTAQSDCCERISAEDFARVKSIAPDVCVPFFRADIFFLMLDVDAQYR* # ORIGINAL: g4485.t1 original gene structure, not modified by PASA NODE_3677_length_2973_cov_35.9714 AUGUSTUS gene 69 961 . - . ID=g4485;Name=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS mRNA 69 961 . - . ID=g4485.t1;Parent=g4485;Name=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS exon 823 961 . - . ID=g4485.t1.exon1;Parent=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS CDS 823 961 . - 0 ID=cds.g4485.t1;Parent=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS exon 492 614 . - . ID=g4485.t1.exon2;Parent=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS CDS 492 614 . - 2 ID=cds.g4485.t1;Parent=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS exon 69 241 . - . ID=g4485.t1.exon3;Parent=g4485.t1 NODE_3677_length_2973_cov_35.9714 AUGUSTUS CDS 69 241 . - 2 ID=cds.g4485.t1;Parent=g4485.t1 #PROT g4485.t1 g4485 MLESFVSTVVPELAALGDLRKDTGRLPLYVQHATARVRFLHDKNRSGRFKIKDACLSGVISEILSLRRADAATAVNWFSAATFERIRQSFCGVSMYGEFVSRAQFLRFNESNVTKLFARRLFQVNNIPDRGMAGIPDTDTLFSL* # ORIGINAL: g224.t1 original gene structure, not modified by PASA NODE_769_length_17932_cov_36.7743 AUGUSTUS gene 1281 2111 . + . ID=g224;Name=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS mRNA 1281 2111 . + . ID=g224.t1;Parent=g224;Name=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 1281 1541 . + . ID=g224.t1.exon1;Parent=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 1281 1541 . + 0 ID=cds.g224.t1;Parent=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 1734 1840 . + . ID=g224.t1.exon2;Parent=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 1734 1840 . + 0 ID=cds.g224.t1;Parent=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 2069 2111 . + . ID=g224.t1.exon3;Parent=g224.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 2069 2111 . + 1 ID=cds.g224.t1;Parent=g224.t1 #PROT g224.t1 g224 MSLSRAANVSTSQVGKNNFRPPPKVESSVVRLEPRNPPPPVNFQEWDGLVRIAFVRKNKTIGACFRSSTVYELLEKNYKTMCALNGIELPADFNMKEMVLRVVIDNGFEEMRARTMDIDDFLRLLKCFNDVGIHFA* # PASA_UPDATE: g227.t1, single gene model update, valid-1, status:[pasa:asmbl_9280,status:12], valid-1 NODE_769_length_17932_cov_36.7743 . gene 10534 15807 . - . ID=g227;Name=g227.t1 NODE_769_length_17932_cov_36.7743 . mRNA 10534 15807 . - . ID=g227.t1;Parent=g227;Name=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 15094 15807 . - . ID=g227.t1.exon1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 15094 15807 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 14836 14899 . - . ID=g227.t1.exon2;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 14836 14899 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 14356 14406 . - . ID=g227.t1.exon3;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 14356 14406 . - 2 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 13940 14034 . - . ID=g227.t1.exon4;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 13940 14034 . - 2 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 13280 13354 . - . ID=g227.t1.exon5;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 13280 13354 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 12857 13014 . - . ID=g227.t1.exon6;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 12857 13014 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 12210 12333 . - . ID=g227.t1.exon7;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 12210 12333 . - 1 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 11844 11953 . - . ID=g227.t1.exon8;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 11844 11953 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 11481 11622 . - . ID=g227.t1.exon9;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 11481 11622 . - 1 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 11174 11266 . - . ID=g227.t1.exon10;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 11174 11266 . - 0 ID=cds.g227.t1;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . exon 10534 10782 . - . ID=g227.t1.exon11;Parent=g227.t1 NODE_769_length_17932_cov_36.7743 . CDS 10534 10782 . - 0 ID=cds.g227.t1;Parent=g227.t1 #PROT g227.t1 g227 MPTIPMDDEPSARNASAGDRDAKKERRHRGSRDDGDNGEGERERDKERDRDKERKRKEDDGEGDWDREKEKEKERDREKEKDRERRRREREKEKEKERAAKGEGEGDGATEDAKEKERDRGERSARDKDRGSGRDRDRKDRDKERDKDKEKERDKDKEKERDKDKEKERDKDKDKERDKDKERERRKEKERKEKEKEKDAAGPTKSKATKPSIDSATTANAATAADEPRASGQFGLVKIPDIWSIAKAEKEKEEHDAQQGKKHGDETYMFFLGSKEGGKTTLINRFLERDEPAKTTTAIEYTFGRRMRGVQMVKDVTHIWELGAGTQLLKLIEVPIYRAHFNKLSIVICVDLSKMGLVWATLETLLAAVRARVEHVYGEIRAKEPKVAKKLEDRMWQKYGTDHPDKALLRPMPVPVVIVGTKYDVFKDLESEPRKIACRALRYIAHLNCASLYFSSNTEENIIKILNHHAFKTPVPGSRSVEPFKALSVIAGQDSIQQIGPPPVDAKELEKTTPALELWKRAFGHIFPATAEETASAKETNPAVDPQYLETAIDAMRAQKDEELERYRRNAERKFMMELMREQAASTASLRPSFDQSMNPSASSGKKGLPQASSSSISKMAANK* # PASA_UPDATE: g225.t1, single gene model update, valid-1, status:[pasa:asmbl_9278,status:12],[pasa:asmbl_9279,status:12], valid-1 NODE_769_length_17932_cov_36.7743 . gene 2392 5852 . - . ID=g225;Name=g225.t1 NODE_769_length_17932_cov_36.7743 . mRNA 2392 5852 . - . ID=g225.t1;Parent=g225;Name=g225.t1 NODE_769_length_17932_cov_36.7743 . five_prime_UTR 5499 5852 . - . ID=g225.t1.utr5p1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 5390 5852 . - . ID=g225.t1.exon1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 5390 5498 . - 0 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 4930 5040 . - . ID=g225.t1.exon2;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 4930 5040 . - 2 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 4463 4572 . - . ID=g225.t1.exon3;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 4463 4572 . - 2 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 3509 4170 . - . ID=g225.t1.exon4;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 3509 4170 . - 0 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 3176 3245 . - . ID=g225.t1.exon5;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 3176 3245 . - 1 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . exon 2392 2978 . - . ID=g225.t1.exon6;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . CDS 2874 2978 . - 0 ID=cds.g225.t1;Parent=g225.t1 NODE_769_length_17932_cov_36.7743 . three_prime_UTR 2392 2873 . - . ID=g225.t1.utr3p1;Parent=g225.t1 #PROT g225.t1 g225 MSVELGEESLQRLYTWIDEIPLSRPKRNITRDFSDGVMVAETVKHFIPRLVELHNYVPSLSSSQKMSNWNTLNQKVFRKLNFTVPDDVVQAVIGGKPGVVEVVLNNLRVKIDKHLARRQQDDFSYDGYDDAPRHPPAQYAGSSFGSDSMHGGSGSDGQMYGGPPPPQQHQQPQYGAPQGVGGYGGHDGRMSHSPAYAAVGDGYGSGGFAAGANGQYNAGGRPGSYRSPGAGAGVSNGNGGGGGMLAPQNAIQTGGGVGRGQAKSSPQPVLLTRRNGGSQQIPQQPQQQMQQPGGRGQAQGRGQPPRGQGNAGMNGMNGMNGMNGNMGGVQGGMAAGGMGDDKDHVIGELQDTVEILNLKVKKLEQLVQLKEKRIVDLTRRLQECGMSA* # ORIGINAL: g228.t1 original gene structure, not modified by PASA NODE_769_length_17932_cov_36.7743 AUGUSTUS gene 16647 17791 . + . ID=g228;Name=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS mRNA 16647 17791 . + . ID=g228.t1;Parent=g228;Name=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 16647 16692 . + . ID=g228.t1.exon1;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 16647 16692 . + 0 ID=cds.g228.t1;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 17012 17125 . + . ID=g228.t1.exon2;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 17012 17125 . + 2 ID=cds.g228.t1;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 17397 17551 . + . ID=g228.t1.exon3;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 17397 17551 . + 2 ID=cds.g228.t1;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 17786 17791 . + . ID=g228.t1.exon4;Parent=g228.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 17786 17791 . + 0 ID=cds.g228.t1;Parent=g228.t1 #PROT g228.t1 g228 MTILTKFETKSARVKGLCFHPKRPWILVSLHNGIIQLWDFRMGTLLDRFDEHDGPVRCVDFHSSQPMFVSGGDDYKIKVWNYKQRRCIFTLLGHLDYVRTVFFHQE* # ORIGINAL: g226.t1 original gene structure, not modified by PASA NODE_769_length_17932_cov_36.7743 AUGUSTUS gene 6307 9716 . + . ID=g226;Name=g226.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS mRNA 6307 9716 . + . ID=g226.t1;Parent=g226;Name=g226.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 6307 8756 . + . ID=g226.t1.exon1;Parent=g226.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 6307 8756 . + 0 ID=cds.g226.t1;Parent=g226.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS exon 9212 9716 . + . ID=g226.t1.exon2;Parent=g226.t1 NODE_769_length_17932_cov_36.7743 AUGUSTUS CDS 9212 9716 . + 1 ID=cds.g226.t1;Parent=g226.t1 #PROT g226.t1 g226 MTKLVEAMMSFDVSDQRASAFAFVSHLPAAVTKLLIEVCSHDSGAINEDHSRRARSLVAEFCCFSVEAVAVAKIDNGGIHVGPDDEMWGMIINAAVNAVPSASSQRKCSVWMCFMLLRYPSFASTHMRQALKSNTRLIEAIVLDMSNRDSTLVAYATIALAEIYQFDGALMSAFAPRFIRGIEAMFRITDTHYKLTHTAVARYVTGICRALTKEPEWPSFPFHSPQTNPPFDTIPHFKELCAALRTNSGLMVYAVSAVTAVCSGRKKRSVTFSDAATFVKTLGLVPPEWYLSLSAGKMPFSLEMKNSKVADYEPSQSIIRALSLKCDRGASCTGVNCACELQGATLHFAAGYATLEALTMEFVRLQMHATDASITAAPLAEFALETMATYRVPGRQSPLSGARRVVSLADYVCASVTIHGIAVQTPAGMPMNPFTALGDALRNSRWTTRATKAILEHITVMGGTRPIRETVLHWKSALLKHDPRGTPDITAPAATPDDASWALITSLGLMPAHVAFSAILTLKDGAVRDALGDAASTTALVRAVMRHFACTFVVDNDVTSLRIAIADLLVALVNATGGLLGLVPADLLKLSESSAQATTSDELLNTLIVWKFQQKICFVRFNGQVLKVDGMYRWVAARLYALKMGAHHLISPWATMSREAGAGGVVSSSPNAQYAVVCDKCDWFNGSKLGPCGCGWLRMDPSWGSDVRKAKKMPGAVVSYTALIDAAGGDDINSSANAHSAAPNDSDTARKSAGTVGGPGGPAPADGLRAPQSQPSSTTTRSGGAGVGNSGISAAACMQCGCDGVKMFRCSGCMAASPASPQPSQYHSQPKPPRCHTLRKVTTAERLRQYSRPSTDSVVGLSTQLHSARLLYTPDSGGTTVACLTWPLPVMAAIECRRITATTGNRCAGNRRGMLIVTETLSVRHDSYERLVTAVVRTTVTFHTPHQPLTHMPVHQAHLLAPAEAHAFNKARSQLQTNNTDQSN* # PASA_UPDATE: g9963.t1, single gene model update, valid-1, status:[pasa:asmbl_5234,status:12], valid-1 NODE_2919_length_4737_cov_35.3944 . gene 379 1585 . + . ID=g9963;Name=g9963.t1 NODE_2919_length_4737_cov_35.3944 . mRNA 379 1585 . + . ID=g9963.t1;Parent=g9963;Name=g9963.t1 NODE_2919_length_4737_cov_35.3944 . exon 379 556 . + . ID=g9963.t1.exon1;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . CDS 379 556 . + 0 ID=cds.g9963.t1;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . exon 865 992 . + . ID=g9963.t1.exon2;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . CDS 865 992 . + 2 ID=cds.g9963.t1;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . exon 1325 1585 . + . ID=g9963.t1.exon3;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . CDS 1325 1405 . + 0 ID=cds.g9963.t1;Parent=g9963.t1 NODE_2919_length_4737_cov_35.3944 . three_prime_UTR 1406 1585 . + . ID=g9963.t1.utr3p1;Parent=g9963.t1 #PROT g9963.t1 g9963 MAGSHFLPALTSPQVAARLIFTGDLVDAAEAQRLGLLLSTHEPDRLIPEALTLARKVAAASPIAIRAVTRTMRAKLDTDIERALWREADTQAICYAGDDIIEGIGALLQKRTPVFKDVWTVGSKKEEA* # PASA_UPDATE: g9964.t1, single gene model update, valid-1, status:[pasa:asmbl_5235,status:12], valid-1 NODE_2919_length_4737_cov_35.3944 . gene 3503 4555 . - . ID=g9964;Name=g9964.t1 NODE_2919_length_4737_cov_35.3944 . mRNA 3503 4555 . - . ID=g9964.t1;Parent=g9964;Name=g9964.t1 NODE_2919_length_4737_cov_35.3944 . exon 4407 4555 . - . ID=g9964.t1.exon1;Parent=g9964.t1 NODE_2919_length_4737_cov_35.3944 . CDS 4407 4555 . - 0 ID=cds.g9964.t1;Parent=g9964.t1;5_prime_partial=true NODE_2919_length_4737_cov_35.3944 . exon 3503 4171 . - . ID=g9964.t1.exon2;Parent=g9964.t1 NODE_2919_length_4737_cov_35.3944 . CDS 3919 4171 . - 1 ID=cds.g9964.t1;Parent=g9964.t1 NODE_2919_length_4737_cov_35.3944 . three_prime_UTR 3503 3918 . - . ID=g9964.t1.utr3p1;Parent=g9964.t1 #PROT g9964.t1 g9964 IINKTVTDLFAVLDSFVLGARNEIQERLGHCKAIRTAYDYILGGVCSMTQYNVDTFWFGLGITGFFLIPTIIFNVRLAKYYRRMDDEYFDTQEKDYFQNDFDKPHSRLERDLTEMPVPQDHFELDVKADSLYY* # PASA_UPDATE: g12852.t1, single gene model update, valid-1, status:[pasa:asmbl_5750,status:12], valid-1 NODE_3230_length_3959_cov_37.9006 . gene 734 3802 . + . ID=g12852;Name=g12852.t1 NODE_3230_length_3959_cov_37.9006 . mRNA 734 3802 . + . ID=g12852.t1;Parent=g12852;Name=g12852.t1 NODE_3230_length_3959_cov_37.9006 . five_prime_UTR 734 980 . + . ID=g12852.t1.utr5p1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 734 1055 . + . ID=g12852.t1.exon1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 981 1055 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 1315 1439 . + . ID=g12852.t1.exon2;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 1315 1439 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 1978 2194 . + . ID=g12852.t1.exon3;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 1978 2194 . + 1 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 2593 2676 . + . ID=g12852.t1.exon4;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 2593 2676 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 2873 2941 . + . ID=g12852.t1.exon5;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 2873 2941 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 3230 3460 . + . ID=g12852.t1.exon6;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 3230 3460 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . exon 3782 3802 . + . ID=g12852.t1.exon7;Parent=g12852.t1 NODE_3230_length_3959_cov_37.9006 . CDS 3782 3802 . + 0 ID=cds.g12852.t1;Parent=g12852.t1 #PROT g12852.t1 g12852 MDDDNENNDRGGDSPQLKRRSTAAEFSGDGASSQHVTLAMMEDILDKLKMLGYEKFMKKHSLLPIPRHYFAIPAPKPAEQFRAFTAVVAFLMQQCGNRFDPGDEQSDPNVMVSAITMELKKMGMAVDFPPTKLKQAHGEIVCNVLQQLTDAAINASRVQFKRPVHKQDDYQEDAEADEDAEVTADKIEDEHQQSDQDEPEDNLYDFEASKRQQYDDDIPSLVSASGGTFRPNLQGKARNLQSDAVLESDVDPEAWRLEVERVTPMLKSMGTAP* # ORIGINAL: g12851.t1 original gene structure, not modified by PASA NODE_3230_length_3959_cov_37.9006 AUGUSTUS gene 125 301 . - . ID=g12851;Name=g12851.t1 NODE_3230_length_3959_cov_37.9006 AUGUSTUS mRNA 125 301 . - . ID=g12851.t1;Parent=g12851;Name=g12851.t1 NODE_3230_length_3959_cov_37.9006 AUGUSTUS exon 125 301 . - . ID=g12851.t1.exon1;Parent=g12851.t1 NODE_3230_length_3959_cov_37.9006 AUGUSTUS CDS 125 301 . - 0 ID=cds.g12851.t1;Parent=g12851.t1 #PROT g12851.t1 g12851 MPSAVDLMGEGPREYLESNVFPTLLPAIEKLLAAVKRTETEQQKRQVVKPRGSSRNLVK # PASA_UPDATE: g1444.t1, single gene model update, valid-1, status:[pasa:asmbl_5318,status:12], valid-1 NODE_2963_length_4633_cov_40.7315 . gene 81 2759 . - . ID=g1444;Name=g1444.t1 NODE_2963_length_4633_cov_40.7315 . mRNA 81 2759 . - . ID=g1444.t1;Parent=g1444;Name=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 2225 2759 . - . ID=g1444.t1.exon1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 2225 2759 . - 0 ID=cds.g1444.t1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 1830 1996 . - . ID=g1444.t1.exon2;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 1830 1996 . - 2 ID=cds.g1444.t1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 1051 1537 . - . ID=g1444.t1.exon3;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 1051 1537 . - 0 ID=cds.g1444.t1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 684 818 . - . ID=g1444.t1.exon4;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 684 818 . - 2 ID=cds.g1444.t1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 347 498 . - . ID=g1444.t1.exon5;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 347 498 . - 2 ID=cds.g1444.t1;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . exon 81 183 . - . ID=g1444.t1.exon6;Parent=g1444.t1 NODE_2963_length_4633_cov_40.7315 . CDS 81 183 . - 0 ID=cds.g1444.t1;Parent=g1444.t1;3_prime_partial=true #PROT g1444.t1 g1444 MPAMGASNDGEHVVPLHTELDVDPLAIAAAALNTLSDVAVSHSRRSSPFPGDTNNAVEHIPSVPSLFSSKSDVGSFGRAQLKTVDKVRRSRDEALGLGSQQSSDGEFGIAEDDDEDGGVAKKRKNASVSCVPCKQAHRACDCQRPCGRCAKLGILSSCVDVQQKKRGPPPKSDKKARKRTPKQVPSVSGKPVPDITTSMLDVTCDIALDTLLHGGFGLTSPSPSSASSSSNAAESGESIYSPSVPLSPFTSLVPSPSPGLISHVVSFDSISDESTSEETAVANLDFNNYTSTQTAVRLPGSDLVDFAFKMPTGLLDSVLEELALGMDTFGEAHISPLDRAPLDFLTGAYDGFEGYVVSPASASRFGHPNELQSPPLLSNLVIPDYEGFNFPVRQTGEAFTMHYPCGDGALRAMPISTGTLYDYSALSEFDLIVHNKTADTPTGVVPGLIGVGKWFLPYLNPKTREILKMADALQKYKNPDGTAQMRYAEMLKGMLKKMTELWQEVESLSFVEVGVRGFVSGCGQQP # PASA_UPDATE: g1644.t1, single gene model update, valid-1, status:[pasa:asmbl_2442,status:12], valid-1 NODE_1720_length_9530_cov_60.1237 . gene 7613 9318 . - . ID=g1644;Name=g1644.t1 NODE_1720_length_9530_cov_60.1237 . mRNA 7613 9318 . - . ID=g1644.t1;Parent=g1644;Name=g1644.t1 NODE_1720_length_9530_cov_60.1237 . exon 7613 9318 . - . ID=g1644.t1.exon1;Parent=g1644.t1 NODE_1720_length_9530_cov_60.1237 . CDS 7756 9318 . - 0 ID=cds.g1644.t1;Parent=g1644.t1 NODE_1720_length_9530_cov_60.1237 . three_prime_UTR 7613 7755 . - . ID=g1644.t1.utr3p1;Parent=g1644.t1 #PROT g1644.t1 g1644 MNSCTHGSSFSFTLGIAASTYIVLLFFAGVLGFAETSLLSPENVGVAFAAVRRSGQYVSGRATAIVEVVKEKSTASQDGTHPRFVFSRTVLTWEDGDREIKSIALSLINDAIAQVPDEYIVLNITSATAAGIEPFRQQLKLTIVDDGDVLVAYDPTYSMRYALAGVAALLQIVTLAAAVLVYVKRKDKVFKASSPKFCLIILLGCMFAYSVVYAMILPATTARCTIPSWLGHISFAIAFGALFAKTHRVMTIFGNRRLNKRINVGDERLLAIVGSVVGVVVVYLSVWTAVDGPTPTTKIVQHVEHLECANTNTGWAIALYASEGAFLLWGVYLSWRTRSVTTLFNESKFIAMAIWNIFFIAIIVLPMSFAINTDDADTQFLFTSIGMIAATTVVLALIFGPKVYVMHRRKHKDATGYRSSYDSHNAHTDDSRATGTKCTHCSHIDKSYPNSPKTSMPPTAIAVDNYGFNREAMRSQKKKKQDDFYMDTVETPQSPRAVHAATVVESSIGAENAGVPENQV* # ORIGINAL: g1642.t1 original gene structure, not modified by PASA NODE_1720_length_9530_cov_60.1237 AUGUSTUS gene 253 3685 . - . ID=g1642;Name=g1642.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS mRNA 253 3685 . - . ID=g1642.t1;Parent=g1642;Name=g1642.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 253 3685 . - . ID=g1642.t1.exon1;Parent=g1642.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 253 3685 . - 0 ID=cds.g1642.t1;Parent=g1642.t1 #PROT g1642.t1 g1642 MLSFVRVLILVALTLVAILSLPLMANGAATVCGGKTGAVATGWTCFCDGAVLVGCKNETRTSSFVASGNALFTDIQPGAFRNLTNVTDFSLGYEDTGLSTWDGLFDALPRLRSVVIAERSLSSKNLSGAASAPLTKARIQKMFAASLASITSLTLPARLEALGAGTFTALPNLKSLTLRQFGDVPGGPALIVSAFGSNSSLTTLMLDGDLFTGAFIMDASTLAGLSQLQLLTFEFGFTSTCTADTFRPLTALQSLYMGSFVTVPLDDPSFDAGLPLPNLRTLSFDWNSRFAVSNGAFLGTPLLSFFDFDADVFFRDGTFPYSVFAPLRNNSALRILRELRQPTRLRHVEAITAAIDCTFLRFFPLATYMWRGLSTDAQHVAMTSSLMSEACDPSIIVVRQRFFSVSFQPPSTLTLITNGTFASSNVTANKAMPAFATTGFPGSAQYTEIQVPLFISGSNATFIMTAFPRTADLRIYPIFDSSSYGMPVSIPLTPVALPVTWATPSSFAFASIAESSVVARSTSLATQSSFFGSLLYYKLNVTRIPVGAAMNRNNSNTNNNITSDSVSMLDVAVPTAGVSVTGLSAYTTYSMCFRPYVNTTSNGWAIASMPAVCGILDQVPLWTGGVRVCTMANSVKLAWDAPQAFFSGDVTYSVSAWNGMMLASMPLTYASFPIAANDSLVGVNATYTVTAVNMRGSSSASAWTVNPYAPLTWAGWAAPGDVFSATVGTNSVSVNATIPCGVPTMYNVTATPLTALFGQATTRLARTATCATLPCSLYGLVPYTSYNLTVTASNAHATSEVLWKSIVTKQIPPPAVSAPSAALITSTTVLVRWDTTGLGDNGPLIYFAVWRNSTLITSEVVAAVSTYLDTEAPENSDVVYRIDAENAAGITQGVVSTSVRTMRIRAPPKPSRPLLVRTSQDSIQMQWDVSEANGRVVVVILYRDDGPAPLDTWPYAHKTHTDYNMTYGVPYRYRVWASTGAGDTMGDWSDPYVLERPIDVTQSQAQTGGGGVSVTTVAVAVTVTLVAVAAMSVFGLRVFMRKWKAEKSMKMHAEFLETHLRGGELSEHELDMGSLEMQSQLGSGEFGVVYLGRAYSAGRWRVCAIKTLRQGATVEMREDFVGEAMLMRGLSHANVISLVAVQTR # ORIGINAL: g1643.t1 original gene structure, not modified by PASA NODE_1720_length_9530_cov_60.1237 AUGUSTUS gene 4529 7198 . + . ID=g1643;Name=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS mRNA 4529 7198 . + . ID=g1643.t1;Parent=g1643;Name=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 4529 4583 . + . ID=g1643.t1.exon1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 4529 4583 . + 0 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 4977 5096 . + . ID=g1643.t1.exon2;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 4977 5096 . + 2 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 5297 5430 . + . ID=g1643.t1.exon3;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 5297 5430 . + 2 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 5655 5809 . + . ID=g1643.t1.exon4;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 5655 5809 . + 0 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 6156 6300 . + . ID=g1643.t1.exon5;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 6156 6300 . + 1 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 6552 6668 . + . ID=g1643.t1.exon6;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 6552 6668 . + 0 ID=cds.g1643.t1;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS exon 7010 7198 . + . ID=g1643.t1.exon7;Parent=g1643.t1 NODE_1720_length_9530_cov_60.1237 AUGUSTUS CDS 7010 7198 . + 0 ID=cds.g1643.t1;Parent=g1643.t1 #PROT g1643.t1 g1643 MRVLAVLATACALFGLVVGLCVDSPARFEPSGLSYNTKTKTLYIVSDTGEFGYIDLGTGLVHTLGNNGLDVESVTYVPSSPDLVYLGVEYPPTIIEWNIQTNQELRRFLLPGMPASSKRGMEALAFVPSDKTKQGGFFWAGTQDNGGIYVFEVPLMSNSTIFEQSATLLAVHDSYYYKDKYYYDLSDLYYSPSTGTVFGAYAAAKGVVEIFIDSRGYPDGGKSYWDLHELDIEGFAIDVGADGNTTTFLASDTNQQMYSGWFDSDGSVRVDCADNSSATPVASHHSLALILLSAFASTAILFAL* # ORIGINAL: g10380.t1 original gene structure, not modified by PASA NODE_824_length_17284_cov_51.869 AUGUSTUS gene 14487 15972 . - . ID=g10380;Name=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS mRNA 14487 15972 . - . ID=g10380.t1;Parent=g10380;Name=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 15918 15972 . - . ID=g10380.t1.exon1;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 15918 15972 . - 0 ID=cds.g10380.t1;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 15456 15569 . - . ID=g10380.t1.exon2;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 15456 15569 . - 2 ID=cds.g10380.t1;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 15229 15324 . - . ID=g10380.t1.exon3;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 15229 15324 . - 2 ID=cds.g10380.t1;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 14487 14938 . - . ID=g10380.t1.exon4;Parent=g10380.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 14487 14938 . - 2 ID=cds.g10380.t1;Parent=g10380.t1 #PROT g10380.t1 g10380 MAAPPTARVTLLEKTAVATAGGLGIGLSIAAYRGRGYAGYSAFFGGTAGVGALSFFGIRELLIRNERSEMESSIFAGSVTGTAVGRFISRTREGAILGIVSGFVLGYIAQHVIDAHESERTVRLLRAKVIQKYGYDPLDPDSVRPAVPAAAGAASLPNTPRRPPTAAERQEAALEQRAMSSSRSGSRVSWPKWLPIRRLSDEEYQRMLEEKILAVEYKLEQFAADEAEKNARDPKNST* # PASA_UPDATE: g10376.t1, single gene model update, valid-1, status:[pasa:asmbl_9559,status:12], valid-1 NODE_824_length_17284_cov_51.869 . gene 940 1595 . - . ID=g10376;Name=g10376.t1 NODE_824_length_17284_cov_51.869 . mRNA 940 1595 . - . ID=g10376.t1;Parent=g10376;Name=g10376.t1 NODE_824_length_17284_cov_51.869 . five_prime_UTR 1547 1595 . - . ID=g10376.t1.utr5p1;Parent=g10376.t1 NODE_824_length_17284_cov_51.869 . exon 1387 1595 . - . ID=g10376.t1.exon1;Parent=g10376.t1 NODE_824_length_17284_cov_51.869 . CDS 1387 1546 . - 0 ID=cds.g10376.t1;Parent=g10376.t1 NODE_824_length_17284_cov_51.869 . exon 940 1163 . - . ID=g10376.t1.exon2;Parent=g10376.t1 NODE_824_length_17284_cov_51.869 . CDS 1006 1163 . - 2 ID=cds.g10376.t1;Parent=g10376.t1 NODE_824_length_17284_cov_51.869 . three_prime_UTR 940 1005 . - . ID=g10376.t1.utr3p1;Parent=g10376.t1 #PROT g10376.t1 g10376 MARTIAEQIESSEAAVAALEAQLDAINARLDDSVAPAELKTRKKAVEKDIHDKNKEIASLRAENRKTAMLSVIIVAFMFIIAYNMGYVDWPEPPMRRQEGLPPLV* # ORIGINAL: g10375.t1 original gene structure, not modified by PASA NODE_824_length_17284_cov_51.869 AUGUSTUS gene 210 402 . + . ID=g10375;Name=g10375.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS mRNA 210 402 . + . ID=g10375.t1;Parent=g10375;Name=g10375.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 210 402 . + . ID=g10375.t1.exon1;Parent=g10375.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 210 402 . + 1 ID=cds.g10375.t1;Parent=g10375.t1 #PROT g10375.t1 g10375 KNNNNGPLMYLSHSPHIEQVEIRPMMYVALTYDHRLIDGREAVTFLRKIKAVIEDPRRLLVDL* # ORIGINAL: g10378.t1 original gene structure, not modified by PASA NODE_824_length_17284_cov_51.869 AUGUSTUS gene 8120 8894 . + . ID=g10378;Name=g10378.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS mRNA 8120 8894 . + . ID=g10378.t1;Parent=g10378;Name=g10378.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 8120 8387 . + . ID=g10378.t1.exon1;Parent=g10378.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 8120 8387 . + 0 ID=cds.g10378.t1;Parent=g10378.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 8491 8894 . + . ID=g10378.t1.exon2;Parent=g10378.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 8491 8894 . + 2 ID=cds.g10378.t1;Parent=g10378.t1 #PROT g10378.t1 g10378 MCDLAFYSPTPYDALSQLLSMSDAELQMAGLTFVADMTEEEGGGSMDLLSGTDQVGPTVAVTRDNVHDYVRAHAMWLMVGRVKDALDAMHAIRSACEMQDATKNVAGGHSTEQWIGNCLGRMNDDQRSAFVYFVTGSPALMSTNQKITVRIDVCSASNATTCPARTSRTVKDGRTAHVRAPCVHLPTANVCTMMVLLPVCETEDILLAKLLTACMHTPTYEFD* # ORIGINAL: g10377.t1 original gene structure, not modified by PASA NODE_824_length_17284_cov_51.869 AUGUSTUS gene 1964 7874 . + . ID=g10377;Name=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS mRNA 1964 7874 . + . ID=g10377.t1;Parent=g10377;Name=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 1964 2312 . + . ID=g10377.t1.exon1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 1964 2312 . + 0 ID=cds.g10377.t1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 2794 3370 . + . ID=g10377.t1.exon2;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 2794 3370 . + 2 ID=cds.g10377.t1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 3711 3964 . + . ID=g10377.t1.exon3;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 3711 3964 . + 1 ID=cds.g10377.t1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 4816 5465 . + . ID=g10377.t1.exon4;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 4816 5465 . + 2 ID=cds.g10377.t1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 5719 6211 . + . ID=g10377.t1.exon5;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 5719 6211 . + 0 ID=cds.g10377.t1;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS exon 6298 7874 . + . ID=g10377.t1.exon6;Parent=g10377.t1 NODE_824_length_17284_cov_51.869 AUGUSTUS CDS 6298 7874 . + 2 ID=cds.g10377.t1;Parent=g10377.t1 #PROT g10377.t1 g10377 MILFNGERIDDAEYGDSSGDSAFSDSDPDDLVSDESDGSDDDDQYFSFFPSIFDNYFDDEEDDEEEDFDDEEEDYDDEDDEDEDEEGEGDCSCGESLADGTDSDGRRTRRRLLQKIVDNAFSARAAAPAAATVASVVPTVLPKYDAKDTGAASFFPDTPTLAACEIDVHIKVAMNSLTTADIAELFTERSLGCIVTDEIVLPNTILLSDAKCAISSMALKGDATRVSEGSTTAAATATTADLPIGASENLRFPCAPVSSTASLGHVPAQSDACVMLRCKFRATISAKALLGTRGEGMFALVFLSSATTLSDTVSLAGNHMVTCQSPTSPLPCCVTDGVLHDVLIFFGCGDGSVTVFVDGTACLRVVLKRPMSLSTVAIVSRRMAVDVTHFSVQGHSRVDASTSTPLARVDADTSVPLAAIGGKVALQRAYRTLRRVHLLVTVAGVIASDNNVNLAKAVLAEIVRFMMSSPAALRLRPRDSAAIRRVFDLVKSILSEDVLCELVIKNGGANLAKALEELPDVAVSSNGEDGHFRRYFVRDIISAFRGRERLFGQMLFSCLLVIPLRPVCALIDAATHAGIALTAAIIAPAASFFTLPRPNVDPSIYHTLTWGIRNDITYGATVDAVLSLPVGCDPLQPDSSPLLARNKLGQTPLLSTLLLGERWYAERLLSLHTSLSMAAADTSILAPDEMNNNVFHALMASTNAVPIDGVADALFRATEGPLRRAALLQRNSAGLIPLEVLVRKTVVFNEKRDFPSVALLERHRFVEDSLASFDNAPPWEFMSHFTERVRAVGSEAVRSLFAESASRVFAGYFALALDEKLFLIFRPMLELSPLKACRVLVDALHTFGTALEGGRGPDYLFGTDTCVCHGTSARRSCPRSTKSIGLNRLAFMTVPQAANVQPAHSASMDADKAINTLTCGSSAAHCNSREFLGKAFYSLTKRLCGFVCGFAAGATALDTHGEDARQWDGVLVSLAKAVEIAWEIVAEKLDSVETQLRLQVVAKEPLVRPNTLKLSFCDYAYSLLRGKQMLRAVTFLPDISFLANACYFVAMEFPQIARLVGARSTMTSAPSPRGLSHAECVGGADDGRSRDPVLADEVAAFYKAPDVSIRSNASARDGERHRNFPRASDVVMAHSDGALESETLGSLLSRDHGSAQLRTVACAHGITDDTHVCTTRRLPLVADAFERWPVAVTILARHLMTDDEWEKDTLMYLRQTINRVNIVRVNLSALANREELEIVTRRDKPLSNLWAMRNVSSLASVRVRFVGERGLGAGVNRGWFTAFGEALSGRVRHGCQDGN* # PASA_UPDATE: g10379.t1, single gene model update, valid-1, status:[pasa:asmbl_9560,status:3], valid-1 NODE_824_length_17284_cov_51.869 . gene 10058 13186 . - . ID=g10379;Name=g10379.t1 NODE_824_length_17284_cov_51.869 . mRNA 10058 13186 . - . ID=g10379.t1;Parent=g10379;Name=g10379.t1 NODE_824_length_17284_cov_51.869 . five_prime_UTR 13063 13186 . - . ID=g10379.t1.utr5p1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . exon 12532 13186 . - . ID=g10379.t1.exon1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . CDS 12532 13062 . - 0 ID=cds.g10379.t1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . exon 12095 12225 . - . ID=g10379.t1.exon2;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . CDS 12095 12225 . - 0 ID=cds.g10379.t1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . exon 11583 11721 . - . ID=g10379.t1.exon3;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . CDS 11583 11721 . - 1 ID=cds.g10379.t1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . exon 11051 11281 . - . ID=g10379.t1.exon4;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . CDS 11051 11281 . - 0 ID=cds.g10379.t1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . exon 10058 10787 . - . ID=g10379.t1.exon5;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . CDS 10635 10787 . - 0 ID=cds.g10379.t1;Parent=g10379.t1 NODE_824_length_17284_cov_51.869 . three_prime_UTR 10058 10634 . - . ID=g10379.t1.utr3p1;Parent=g10379.t1 #PROT g10379.t1 g10379 MSHVDYGDHAAAVAAAAAGASGDKRDPRSVPRPRKSINQISVLEQVLARETKPKKSTVVELMRQTGLTYAEIRNWFRNQRLKYKMGRRNMPSLDPTGALQVAHMHGAPQGLQGLDGMAMPRAQDLMGGRLDKGKDNEAPVTPGKGDDKFRASAKFKRTKEEWITTFNEYPEGTKQRQELLRELIRGLSKEDRNMLQTFLRPRGPYRGSADATLSKSTQVDRSKEAWTEMERRFGASKTRENKYDPDPAAFFNINPAGMPGLGGGPSQMQNPGSPGGNDPARRQTVVGALDSDMLEGLKQMFSLHRDYLYEVARALNVTDIMRQEIEIAIRKDVKKELAIKQKQKQKEDKMRREKRKAADQLENQLVKQQRTMVQPAMATPMYQMPQLLGAGRLQ* # PASA_UPDATE: g14234.t1, single gene model update, valid-1, status:[pasa:asmbl_6662,status:12], valid-1 NODE_3871_length_2590_cov_36.4032 . gene 167 2532 . + . ID=g14234;Name=g14234.t1 NODE_3871_length_2590_cov_36.4032 . mRNA 167 2532 . + . ID=g14234.t1;Parent=g14234;Name=g14234.t1 NODE_3871_length_2590_cov_36.4032 . exon 167 445 . + . ID=g14234.t1.exon1;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 167 445 . + 0 ID=cds.g14234.t1;Parent=g14234.t1;5_prime_partial=true NODE_3871_length_2590_cov_36.4032 . exon 596 708 . + . ID=g14234.t1.exon2;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 596 708 . + 0 ID=cds.g14234.t1;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . exon 932 1614 . + . ID=g14234.t1.exon3;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 932 1614 . + 1 ID=cds.g14234.t1;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . exon 1808 1911 . + . ID=g14234.t1.exon4;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 1808 1911 . + 2 ID=cds.g14234.t1;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . exon 2069 2257 . + . ID=g14234.t1.exon5;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 2069 2257 . + 0 ID=cds.g14234.t1;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . exon 2425 2532 . + . ID=g14234.t1.exon6;Parent=g14234.t1 NODE_3871_length_2590_cov_36.4032 . CDS 2425 2532 . + 0 ID=cds.g14234.t1;Parent=g14234.t1 #PROT g14234.t1 g14234 GESTQLEETISTLRFSQRMMCVANAPVVNVQYDPAMLVRKYEREIKDLKQELAMHDTLASRSHVSYEPYSDMQRYELQKTIKKYLAGEVDDIEVVNLRQIKELFAQFRTVVRNMEGEVEEKLRSKYLIRDREQEKLTTEESTAAAVNAGSVSGNGAVDDGGGVGDVEGGGFGVGIAPASAKPTSSQQPAGSKGAAKKDVRGKTKPPEKEKEKEKEKSSVRSPTPDMKGQQEQNNRAMAAQQQQAQGGPVPQAAASSRDQANPAEKGLAASSGSAAVPDKADKGAGGKTALVSASQSVLQQQAPQLTKQHSSLGTKERVPLGALSTLPEVTATFGKNEAFEDFKTERGSEINRILLENKAVLKEKKRIGRDLSTSVNIAKKDIDDLKNAIQRHKDAAGQPPGEDIIDEEEFSMLRRLRDLKQKYRTDYEELRAVRSDIEYCQRLVDQCRHKLMTEFETWYHQVLMGEPPGRSNMGSASMGGMKSPDRGMEVR* # PASA_UPDATE: g12312.t1, single gene model update, valid-1, status:[pasa:asmbl_4460,status:12], valid-1 NODE_2505_length_6049_cov_37.6428 . gene 51 5938 . + . ID=g12312;Name=g12312.t1 NODE_2505_length_6049_cov_37.6428 . mRNA 51 5938 . + . ID=g12312.t1;Parent=g12312;Name=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 51 80 . + . ID=g12312.t1.exon1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 51 80 . + 0 ID=cds.g12312.t1;Parent=g12312.t1;5_prime_partial=true NODE_2505_length_6049_cov_37.6428 . exon 198 318 . + . ID=g12312.t1.exon2;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 198 318 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 662 756 . + . ID=g12312.t1.exon3;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 662 756 . + 2 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 1079 1265 . + . ID=g12312.t1.exon4;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 1079 1265 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 1617 1680 . + . ID=g12312.t1.exon5;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 1617 1680 . + 2 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 1893 2049 . + . ID=g12312.t1.exon6;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 1893 2049 . + 1 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 2261 2389 . + . ID=g12312.t1.exon7;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 2261 2389 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 2791 2979 . + . ID=g12312.t1.exon8;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 2791 2979 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 3361 3523 . + . ID=g12312.t1.exon9;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 3361 3523 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 3772 3864 . + . ID=g12312.t1.exon10;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 3772 3864 . + 2 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 4103 4325 . + . ID=g12312.t1.exon11;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 4103 4325 . + 2 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 4542 4838 . + . ID=g12312.t1.exon12;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 4542 4838 . + 1 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 5094 5183 . + . ID=g12312.t1.exon13;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 5094 5183 . + 1 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 5394 5466 . + . ID=g12312.t1.exon14;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 5394 5466 . + 1 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 5568 5650 . + . ID=g12312.t1.exon15;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 5568 5650 . + 0 ID=cds.g12312.t1;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . exon 5827 5938 . + . ID=g12312.t1.exon16;Parent=g12312.t1 NODE_2505_length_6049_cov_37.6428 . CDS 5827 5938 . + 1 ID=cds.g12312.t1;Parent=g12312.t1 #PROT g12312.t1 g12312 QCGEKAGKDYLDAIIGPACTSEGTSIVPVSGLYKIPVISFGASSTELSNKGLYPYFMRTHPSNDLEGLTAVAMALHFGWSQIALITMDSFPLDDNFRRTARSMNVTLAVDIVLQDKPDGSGDYRDALASIKQLGIRVIANFAYGGTGTALYRQAADLGIVGPGYQWVLGFAAYDSTLWPIRLQSYNSSHTWLDIFAGSFGTRVTTFGGNLTTVGQVVQIWNAKNMSQYAPENPSVSPTAGISSSGEPIGGLALTGSTGYDATTVAIKAYHRLIYGLRSEKNRADAYALMLQSDYLGVGGHLQFDANGDILAKRRTVQLRIDPNAARNTSARYYVQEWGFVSYSSTKIPSLTNINIDMDARGWYGYQWPGLTNATVPPAFLCIPACVNGACVAPNKCRCNAGWTGDTCAIGGASGVSSSSSVNPLAIALPVGLSVLSIIVAGVFLRSMAGRKSRALMNEKRNLIDATEISLGDKVAEGSFGEVYRAVFRGTTVAVKVLKSIGRDDESESQTSGSGNAARKKSESLIKGVGGSNGNTSLTHTKGAVLSNASSGWGAKNEDSSDNVARPTPRSRLSILSTTFAFRRSLVGGSSVSRSRSMAHLRGRDFLNEIDLLANLRHPHIVLYMGYCQMPQMAIVQEFMAKGSVFSLLQENKGQIDWNLKLRMACDAAMGVEYLHRNTPPIIHRCALHNYAITQSRNHAIM* # ORIGINAL: g5029.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 84275 87625 . - . ID=g5029;Name=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 84275 87625 . - . ID=g5029.t1;Parent=g5029;Name=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 86065 87625 . - . ID=g5029.t1.exon1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 86065 87625 . - 0 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 85803 85920 . - . ID=g5029.t1.exon2;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 85803 85920 . - 2 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 85624 85700 . - . ID=g5029.t1.exon3;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 85624 85700 . - 1 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 85348 85492 . - . ID=g5029.t1.exon4;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 85348 85492 . - 2 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 84988 85210 . - . ID=g5029.t1.exon5;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 84988 85210 . - 1 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 84568 84871 . - . ID=g5029.t1.exon6;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 84568 84871 . - 0 ID=cds.g5029.t1;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 84275 84414 . - . ID=g5029.t1.exon7;Parent=g5029.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 84275 84414 . - 2 ID=cds.g5029.t1;Parent=g5029.t1 #PROT g5029.t1 g5029 MEGTGDCACVPAAPPAAVLTAQSEAGENGAEDVVIVTRQNKTSQPDLRAAFERFRRERKEEMRNVELMDKRASSQRSDPARMEALRKKFLERAYSYVGVPYAKKYHTLREDGTCSCELEGCRDYDAPLFLDCCGIIRQVLRDLKEDFGFNVGRWNQAYQFDTLPIARQSIEELKPGDLVFYSAQYFNPKARAQIHDMVHVEIYIGNGRTLGARWQKGHIQEHDSYMFTPRSYGNVVHHFRSIDTWLMGIFRSHCVAHPWQRPALNPGKFSIFNGVSGDATAAAQSGCVSRDVRESQQRAQQQHQGGAMQGGDADETADGATDDLDDPFLEIGGGDGDDDDAPGASATPIAAPIAAPIAATVAMRKSLDGKLASSSASKGRPPLKPANTLPAATKPSPSKAAPVRSKAPVTQRAPLTASARPSIQVASKSAPLVPRSAERKIPGVATAKTPQSSSGTTGTASKNKVGVGKVCFIGGNNGSNMITGILAKMGWERTMDKSPSSFRLKWTELKSEIDYNRFVPGEQLVNHIPNAQCLTTKNGLYDSLKEHERAQKGQPGAPFRLSDFLPETFRLDIASERTQFFGMAAGEPNTVWICKPTSMNQGKGIYLVQDIPKFKKEMEDEDRGGKKIARIVQRYIPNPLLIHGRKFDVRVYMLVASTSPFIAFYHTGYLRLSIEKYDREDIGNLTAHLTNQYVQKKHPQFGDLKDDTVWDFDQLQDYLGTMSTKERPIAADWVRSVFEPRMQSIMQVCIASVRNKLDTRAGLFDLYGFDFMVDDNLKVWLIECNVNPALHTTSRILQRIIPAVVEETLGVVTEIYDKRKAGQSLFPLASVHDFVLLQNGDKRAPLASSGAAPNS* # PASA_UPDATE: g5000.t1, single gene model update, valid-1, status:[pasa:asmbl_3226,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 211 2463 . - . ID=g5000;Name=g5000.t1 NODE_1_length_123517_cov_42.9391 . mRNA 211 2463 . - . ID=g5000.t1;Parent=g5000;Name=g5000.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 2375 2463 . - . ID=g5000.t1.utr5p1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 2280 2463 . - . ID=g5000.t1.exon1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 2280 2374 . - 0 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 1848 1902 . - . ID=g5000.t1.exon2;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 1848 1902 . - 1 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 1466 1644 . - . ID=g5000.t1.exon3;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 1466 1644 . - 0 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 1301 1348 . - . ID=g5000.t1.exon4;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 1301 1348 . - 1 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 931 1090 . - . ID=g5000.t1.exon5;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 931 1090 . - 1 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 584 718 . - . ID=g5000.t1.exon6;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 584 718 . - 0 ID=cds.g5000.t1;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . exon 211 473 . - . ID=g5000.t1.exon7;Parent=g5000.t1 NODE_1_length_123517_cov_42.9391 . CDS 211 473 . - 0 ID=cds.g5000.t1;Parent=g5000.t1;3_prime_partial=true #PROT g5000.t1 g5000 MDGSCAGDVAERQDDVGVTDASGEDTAEKIARVHQKLAEKRAEREEKEKEDLLEKELRRREHGKAIIELKRKKEEDEARKIAEELRREKAADSRAREEVLRKIAEDRAAREAEEADRKRRAAGITDDPALSRQDHVPVPTRGKAPDSAQIVFKLPSGATLRGEFKATDTVSALFKHVMENYSGGPLGPFVLRSNVPPRCTFAPGDTSATLSQLQLWPSAILIVQPIAAGAALRGPSAQSKLSSSSGSAVSSPTDGGFIARIFALFAYIFALLNPFAHFGGGSGATHASRLGGAPGDGSRAGAGSNAADNRQ # PASA_UPDATE: g5004.t1, single gene model update, valid-1, status:[pasa:asmbl_3239,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 10215 12326 . + . ID=g5004;Name=g5004.t1 NODE_1_length_123517_cov_42.9391 . mRNA 10215 12326 . + . ID=g5004.t1;Parent=g5004;Name=g5004.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 10215 10336 . + . ID=g5004.t1.utr5p1;Parent=g5004.t1 NODE_1_length_123517_cov_42.9391 . exon 10215 12326 . + . ID=g5004.t1.exon1;Parent=g5004.t1 NODE_1_length_123517_cov_42.9391 . CDS 10337 12157 . + 0 ID=cds.g5004.t1;Parent=g5004.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 12158 12326 . + . ID=g5004.t1.utr3p1;Parent=g5004.t1 #PROT g5004.t1 g5004 MSDTAASNGNNAVSVSTLTHVANTEATHLLNQSPPARDASVHPQQYSRAEQSQCDVLPDEPLRRQQLQLLPQQQQRVDADEGPTQQRVLTHENAMDGAMHYGVEALRDGLDPQVLERLSAGSRDRLLVLRVDRDMEAFVRDAPAPAYEFPPMPAFERMLVHKIAAYYGLGHQANATRTAVVVTRLPSARIPALRLGDLPPPPTPAAAPGSMQVGSPTPAEAPASAVPAADQAPPPPPPAMRIMRRDPHHRSHHQRHGHHGDGCGEDGTQNAGSRRQKTIEEREEDYQRARARIFSGSDAPRGSGSSSPDSPSVFRATHTPESGIQAGAQQGARGAGIAHSHSHSHSLAPQRTAHPAHRPHQQYPGPHHPPHQQFQGQSIRHGHAPPSYPYPYPQPPHHSGADHRPSVSHPTMHPQSMYRGPYPPYGPYGPYPPSQSSQGGARAVLPGPMSMHAPYGHPQGLPSMAHPAHPVHMHMHMPPVPVHVPVPVHGVGPYQSPNGPPAWYAVPPPNSHFFAPTAIRPVTPLDAPEDEADDEAYRRPSQPPTRGLYDPRAPSPQARVRSPPAAAASGASYESRESTEHSGADVADAALTALAATIEGVSIHAG* # ORIGINAL: g5033.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 93603 98070 . + . ID=g5033;Name=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 93603 98070 . + . ID=g5033.t1;Parent=g5033;Name=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 93603 93720 . + . ID=g5033.t1.exon1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 93603 93720 . + 0 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 93973 94193 . + . ID=g5033.t1.exon2;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 93973 94193 . + 2 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 94350 94878 . + . ID=g5033.t1.exon3;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 94350 94878 . + 0 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 95029 95230 . + . ID=g5033.t1.exon4;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 95029 95230 . + 2 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 95454 95578 . + . ID=g5033.t1.exon5;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 95454 95578 . + 1 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 95797 95873 . + . ID=g5033.t1.exon6;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 95797 95873 . + 2 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 96089 96448 . + . ID=g5033.t1.exon7;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 96089 96448 . + 0 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 96634 96732 . + . ID=g5033.t1.exon8;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 96634 96732 . + 0 ID=cds.g5033.t1;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 96943 98070 . + . ID=g5033.t1.exon9;Parent=g5033.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 96943 98070 . + 0 ID=cds.g5033.t1;Parent=g5033.t1 #PROT g5033.t1 g5033 MALRETLSRRQTVGHAASRLGTTPTFVDARRQTTALGDLGGQKVSSEGETAASPSPDACGTDETRVSGLHEPVISQPDVFFDAYPVTRRADYLLFCKCLPWKITFKKIVIVSVLWIGGYTVAMVLIETGLNYAYSSDEQCTETDALRRMTIIAVCVAVALLIGHISLIVFFIMRITRPLRKLDEGMRMLISGKPMPIEWENHSIFEPFPLIKVAASVHRQAVDDLERHKVELSRTRDALAIATAQRRELAVRLGTVEKLLIETAGETPCIVTVFCGTWNVGECAANACVRNQPLPDSLSTWIHTDADIVAIGVQECAIISHIAKMTMPLESNFARLVQDALGKQYYMVECANILGGSNKLKDFASDSAGIRIFVFARRSLRMAISNVRSGHVRTGIAKVAYNKGAVSISFTLHARSFCFINSHLAAHQEKVRERAEDFHRIVSRLEVGATDMYCTTEFDAVFWMGDLNYRIDLPRDLVLGKIADSLQVAAPNWDVLQRHDQLNTERAAGNAFGGFSEGSTNFAPTFKHDFGAPTYENVKKRVPAWCDRILWKIAPGLEIEQQVYDSAKRLMVSDHRPVYARFAVHFVSPRPAYIIGGFHFGLHVVMATLTPIVSLPGGVGALEVLEVHTASSKLRELLKMIEREGTREDDKRDALVPKRLVARFSCPDIMDPNAIDLVMSSSPNVAMVDANNSNGVHNTASADGIAWGASDVHWDMWESRAEQVASRAVRISVGIVKAPEKAENKRDKADRGDAPPSPGLLRRKDNNAEAASPDWTSAAQQSVHGRERDKEGITATGSAMHIADNLGFKDAERHRGSELVFGTIGPLITVTKANDDAAGAPEGSNNGAGGMPCAQPDGPILREARGDGEAPSQIVRRKKIGEGVFGLASLTAAVNEHVAMSVPLYRGGRAVGMLRLVAKCVLVQNSQEEQEVTVEGITSSNLIVDQPRETIL* # ORIGINAL: g5012.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 26860 28264 . - . ID=g5012;Name=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 26860 28264 . - . ID=g5012.t1;Parent=g5012;Name=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 27742 28264 . - . ID=g5012.t1.exon1;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 27742 28264 . - 0 ID=cds.g5012.t1;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 27347 27462 . - . ID=g5012.t1.exon2;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 27347 27462 . - 2 ID=cds.g5012.t1;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 27176 27248 . - . ID=g5012.t1.exon3;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 27176 27248 . - 0 ID=cds.g5012.t1;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 26860 27068 . - . ID=g5012.t1.exon4;Parent=g5012.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 26860 27068 . - 2 ID=cds.g5012.t1;Parent=g5012.t1 #PROT g5012.t1 g5012 MGEARTIKPWQQMAASCAGAVATSLLMTPFDVVKTRLQIQQTTPIHTSTSVFGGCTRVVVGNGFMEHVCFCQGPQFQSTNNLRFSGTIDAFEKIARTEGLRSLWSGLSPTLFMSAPSTVIYFTAYDQLRELFAVSAGPYAPLLAGVLARTGAVTIISPLELMRTMMQSKQYGFGGLYWTSYEYLKEEIAVRHPGMGARESFWNSFSAGALAGTVAATVTTPFDVVKTRKQSRLGALDEPHRSVGTLVEIRGIVRTQGFGGLFVGLLPRVAKVAPACAIMISSYELGKRFFWDLNARQLIESMTDFD* # ORIGINAL: g5017.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 38995 40676 . - . ID=g5017;Name=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 38995 40676 . - . ID=g5017.t1;Parent=g5017;Name=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 40582 40676 . - . ID=g5017.t1.exon1;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 40582 40676 . - 0 ID=cds.g5017.t1;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 40359 40461 . - . ID=g5017.t1.exon2;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 40359 40461 . - 1 ID=cds.g5017.t1;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 40173 40279 . - . ID=g5017.t1.exon3;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 40173 40279 . - 0 ID=cds.g5017.t1;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 39193 40063 . - . ID=g5017.t1.exon4;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 39193 40063 . - 1 ID=cds.g5017.t1;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 38995 39081 . - . ID=g5017.t1.exon5;Parent=g5017.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 38995 39081 . - 0 ID=cds.g5017.t1;Parent=g5017.t1 #PROT g5017.t1 g5017 MYGFGSGSRKGASKSSIKRKRAVGHAEEVDERCANDIEEYFEQRTKQAATSDRTLAGVAIVRMDGQAVLDAIAALPPVFAKERAFLHRNLLSKFAPWLSELMCGFNIILYGFGSKKGLLDEFARTSLAEYPRLVVNGHFPTLTLRHVLSKITGNMIGYGGAFRSVGDQCDLIRAALARDPMLRIFLVIHNVDGPAFRGEKAQAVIAELASIPRFHLIASVDHINAPLSKLFDVHAQLLPLLPIVNHYGSRDSFNWARGQDFKACCGLSAVWEHSKVASIRWIWHDATTFENYSSELSYEGSLLVRPMALSPRTIAVVLRSLTPNARGIFGVLARHQLDAAGAGLDGDCADTHGLSFQEYYARCRELFLANSDLALRTQLIEFRDHAIIRSKKGADGIEYLHIPVDRFVLRQVMDQYGAGK* # PASA_UPDATE: g5009.t1, single gene model update, valid-1, status:[pasa:asmbl_3228,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 19663 21990 . - . ID=g5009;Name=g5009.t1 NODE_1_length_123517_cov_42.9391 . mRNA 19663 21990 . - . ID=g5009.t1;Parent=g5009;Name=g5009.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 21706 21990 . - . ID=g5009.t1.utr5p1;Parent=g5009.t1 NODE_1_length_123517_cov_42.9391 . exon 21645 21990 . - . ID=g5009.t1.exon1;Parent=g5009.t1 NODE_1_length_123517_cov_42.9391 . CDS 21645 21705 . - 0 ID=cds.g5009.t1;Parent=g5009.t1 NODE_1_length_123517_cov_42.9391 . exon 19663 21494 . - . ID=g5009.t1.exon2;Parent=g5009.t1 NODE_1_length_123517_cov_42.9391 . CDS 19777 21494 . - 2 ID=cds.g5009.t1;Parent=g5009.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 19663 19776 . - . ID=g5009.t1.utr3p1;Parent=g5009.t1 #PROT g5009.t1 g5009 MSAMADGPEVWAFDSDEEDAGSPCLLDIPDDTSPNGASTSDALDRIVHESLGYYLDCIFGDEKSAPLKIDANTVVCSESAKEPPSSIISLRSFCGAVVDDAVSLECLASMSGSIVTVVFGVLQFSPCHTVVLRKTSESVPVASLLVGDNTKGYVRIVLWRSAAAWVERLSPGCVVRAAGVLVRTWRGAISCSSTSRTCLSLLYDPRVHGRPSHFLTQRPSPRVRLIIEWLLAVHAHCFAAVDGVPAFSADNRGGRVTGAGPHSPFVAMTCMRDGVICSLLPCHALAASSSAVLLGDGRGSSVLLRLAPAESHWVATVASRPRSAVWEVRDVLPRQTRHGTTIVLVTTCTSQLFARQGKGKDVNVCIMSEPRCYGTLCDVGGQTTMVSARIMAIEFLSPSGGIALRISGSTGCPSTTDIRNYAVYIGCSRCRLPSTPDASGIHMPCVRCIRDACHAGKPNGGCSWMYRPARAILASRDIVAQQPPEGDHISPFADNGASLLRRGELVVELTAAALQSLLCGLPATMAAVRTLREQPFALVGTADGAAERLVVEALWRCVRSSCVTFDLSVRISRDENGYRVDESAVALHAWIL* # ORIGINAL: g5042.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 121082 122353 . + . ID=g5042;Name=g5042.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 121082 122353 . + . ID=g5042.t1;Parent=g5042;Name=g5042.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 121082 122353 . + . ID=g5042.t1.exon1;Parent=g5042.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 121082 122353 . + 0 ID=cds.g5042.t1;Parent=g5042.t1 #PROT g5042.t1 g5042 MARKMQLAAMYARQPKATPIRRRKSHPFRTKAVLSDTSDSEPDAPAAPEPLMTARARVKGALKRLSALDNTLGLPSPTPCVDGDGGRVPSAASTAVSSLAPSSASSASSRHKEHCANGLTGGKKKIGGSATNMRSIPPKGGRRRTDSSSSSADSAPPRTTAAGLDGESHSTRLPQRRSARLAYVLQNSSVGTQIKRRDTAQETDDGIEEDTNLFDRDVAHGHSMCDHGLARTAFCGECVSASLWDHQKSIAPISRMDIGEDDVGVDVVGFDDFGENHDEFAEQICLGSGEEMFVEGFFDLPDDLIGVCESHGEGECLVEGGLEVSTESEGKGECVGDGCTVDDGSPGGEGTPDGERVLPHAALVAPSLNVGMTPLFRGDDGTPSIVATDCSVGACPPGPFVGAGMVGDDGFEQESRQEELGQL* # PASA_UPDATE: g5036.t1, single gene model update, valid-1, status:[pasa:asmbl_3244,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 102899 104538 . + . ID=g5036;Name=g5036.t1 NODE_1_length_123517_cov_42.9391 . mRNA 102899 104538 . + . ID=g5036.t1;Parent=g5036;Name=g5036.t1 NODE_1_length_123517_cov_42.9391 . exon 102899 103254 . + . ID=g5036.t1.exon1;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . CDS 102899 103254 . + 0 ID=cds.g5036.t1;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . exon 103369 103462 . + . ID=g5036.t1.exon2;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . CDS 103369 103462 . + 1 ID=cds.g5036.t1;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . exon 103631 103798 . + . ID=g5036.t1.exon3;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . CDS 103631 103798 . + 0 ID=cds.g5036.t1;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . exon 103985 104538 . + . ID=g5036.t1.exon4;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . CDS 103985 104488 . + 0 ID=cds.g5036.t1;Parent=g5036.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 104489 104538 . + . ID=g5036.t1.utr3p1;Parent=g5036.t1 #PROT g5036.t1 g5036 MTTCMRIALSPTRTSLHLRPSPLASAQRWIHSGHVRALSPKSAHYGSSGRSWGARLPLHSILRVHAPKAFYSAHVSGQGGDGRLQSITVEPDPRLIESGAISERPNAIVFVHSVWHGPWAFAEMQSHFARSGYTSHAVALPFDRSDATIESFITELCRLPTVTPPVLVGHGFGAYVCLKYLESFAARGLAMLSPFPAAAEATYIDKIRNFDKAVAASVRGDSSHIAALFNVPCSPHPPRWFSEYVGKLTPGIPRAAVEQFASEPALFEAHTGLPMLTIGAVGDALCDRDTGPGEYPADTPRPSSRATRGNCVSEVSDRFGIADEWRVLLGSGKYGGADSGHDGVDDGYGVLVAGPNAPRATRRIEAWLDGCGL* # PASA_UPDATE: g5010.t1, single gene model update, valid-1, status:[pasa:asmbl_3229,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 22065 23527 . - . ID=g5010;Name=g5010.t1 NODE_1_length_123517_cov_42.9391 . mRNA 22065 23527 . - . ID=g5010.t1;Parent=g5010;Name=g5010.t1 NODE_1_length_123517_cov_42.9391 . exon 23230 23527 . - . ID=g5010.t1.exon1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . CDS 23230 23527 . - 0 ID=cds.g5010.t1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . exon 23048 23156 . - . ID=g5010.t1.exon2;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . CDS 23048 23156 . - 2 ID=cds.g5010.t1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . exon 22743 22930 . - . ID=g5010.t1.exon3;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . CDS 22743 22930 . - 1 ID=cds.g5010.t1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . exon 22540 22637 . - . ID=g5010.t1.exon4;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . CDS 22540 22637 . - 2 ID=cds.g5010.t1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . exon 22065 22338 . - . ID=g5010.t1.exon5;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . CDS 22156 22338 . - 0 ID=cds.g5010.t1;Parent=g5010.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 22065 22155 . - . ID=g5010.t1.utr3p1;Parent=g5010.t1 #PROT g5010.t1 g5010 MGNAQPTLGGAGDSDALPQSSISGPNTHTLSDFERSDGGGELDSPAVPGSRRSVPKAILDPSRYASSPPPFGSPLDSPSSFGHQRPALVSGNEEDSDTDAHDHVVPTVFRWTQPGHNVYVTGSFNNWTTRIPLSRSRDEFTTIIDLPPGAHQYKFIVDNDWKCNPEQPTIRDPLGIVNNVVEITATDGLDVDLDPTINVPSGSPSGDYGQAVPSIPFGTKPPPTLPPHLLQVILNGEPVEGSEIDPTLLPVPNHVMLGHLYALSIRDGVMVLGVTHRYRNKYITTVVYKPV* # PASA_UPDATE: g5030.t1, single gene model update, valid-1, status:[pasa:asmbl_3224,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 88167 89003 . + . ID=g5030;Name=g5030.t1 NODE_1_length_123517_cov_42.9391 . mRNA 88167 89003 . + . ID=g5030.t1;Parent=g5030;Name=g5030.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 88167 88217 . + . ID=g5030.t1.utr5p1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . exon 88167 88253 . + . ID=g5030.t1.exon1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . CDS 88218 88253 . + 0 ID=cds.g5030.t1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . exon 88369 88457 . + . ID=g5030.t1.exon2;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . CDS 88369 88457 . + 0 ID=cds.g5030.t1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . exon 88568 88628 . + . ID=g5030.t1.exon3;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . CDS 88568 88628 . + 1 ID=cds.g5030.t1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . exon 88726 89003 . + . ID=g5030.t1.exon4;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . CDS 88726 88788 . + 0 ID=cds.g5030.t1;Parent=g5030.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 88789 89003 . + . ID=g5030.t1.utr3p1;Parent=g5030.t1 #PROT g5030.t1 g5030 MAFRKLFKSEPALVPLFAIIGAGVVGAGFYLTRLATRNPDVSWDKKNNPYPWQQIKPDENIKFYGTENLESTLANAPKKSAF* # ORIGINAL: g5013.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 28654 30723 . + . ID=g5013;Name=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 28654 30723 . + . ID=g5013.t1;Parent=g5013;Name=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 28654 28755 . + . ID=g5013.t1.exon1;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 28654 28755 . + 0 ID=cds.g5013.t1;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 28850 29104 . + . ID=g5013.t1.exon2;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 28850 29104 . + 0 ID=cds.g5013.t1;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 29188 29715 . + . ID=g5013.t1.exon3;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 29188 29715 . + 0 ID=cds.g5013.t1;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 29806 30582 . + . ID=g5013.t1.exon4;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 29806 30582 . + 0 ID=cds.g5013.t1;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 30685 30723 . + . ID=g5013.t1.exon5;Parent=g5013.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 30685 30723 . + 0 ID=cds.g5013.t1;Parent=g5013.t1 #PROT g5013.t1 g5013 MDEETIDGATILARSLKRQGVEYMFGVVGIPVIEVAIAAQREGIKYYGMRNEQSASYAAGAVGYMTGRPGACLVVSGPGMIHALGGMANAQVNCWPMIVIGGSSDSNQEGMGAFQEFPQVEAARLYSKYAARPSSVARIPYFVEKAVRASIYGRPGASYIDLAGDMIGAAVPLSEVDDVPRCAEPPISAADPVSVAAALTLLRQSKHPLIVLGKGAAYAKAETQARAFVEAAGVPYLPTPMGKGLVPDDHPQCVASARTHALLHADTIILVGARLNWILHFGMPPRFNPNVKIIQIDICAEEIGVNIPAAVALVGDARTILEQLMRERDQCGWKFPSSSTWWADLRGKMERNAASVQGQARDDSLPMNYYRVFAELEPLLPRDCVIVNEGANTMDIGRAMLPNRLPRHRLDAGTFGTMGVGLGFAIAAQAVWGETDKRVVCIEGDSAFGFSGMEIETAVRYGMPIVFIVVNNNGIYSGLDSSSWNEIAAEGLQPPPTALLPQARYDLMGKSFGCESYLCETPQQLREAVTAALAAKKPAVLNVLISPSAQRKEQEFGWLTRKDSKL* # ORIGINAL: g5019.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 44815 47635 . - . ID=g5019;Name=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 44815 47635 . - . ID=g5019.t1;Parent=g5019;Name=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 47550 47635 . - . ID=g5019.t1.exon1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 47550 47635 . - 0 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 47072 47408 . - . ID=g5019.t1.exon2;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 47072 47408 . - 1 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 46891 46995 . - . ID=g5019.t1.exon3;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 46891 46995 . - 0 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 46733 46817 . - . ID=g5019.t1.exon4;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 46733 46817 . - 0 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 46529 46637 . - . ID=g5019.t1.exon5;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 46529 46637 . - 2 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 46288 46437 . - . ID=g5019.t1.exon6;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 46288 46437 . - 1 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 46012 46196 . - . ID=g5019.t1.exon7;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 46012 46196 . - 1 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 45438 45704 . - . ID=g5019.t1.exon8;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 45438 45704 . - 2 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 45173 45327 . - . ID=g5019.t1.exon9;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 45173 45327 . - 2 ID=cds.g5019.t1;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 44815 45003 . - . ID=g5019.t1.exon10;Parent=g5019.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 44815 45003 . - 0 ID=cds.g5019.t1;Parent=g5019.t1 #PROT g5019.t1 g5019 MTVEEDEALARELARQERESYLEFGESYYQIDESDDANSDGGEYSGGSNRNKKRKRAGPPPSRRQAPKIAKPPAGGKALLGKRTKDSEQAKESTGDVASPAGEHSGGEHLSRQGKTPQRWADDEHTRFLEGLELYGREWDKLASHVGTGRDKNAVKSHAQKHFIKLYIKNEPLPAKVIESGGGYTLSGKPLDPNSAALSAYLKSGSKQQQPAEAGLPPVAQDAAGVPPKPATYDEQSGKRRRAPAKKKVSPAASGSECDDDVPSGRTEYAASRLRSIPQQSGYLTLDQDASNPWMMVQCHKYSGTPGSRSRGSQPFVVRVSPSVLLVTDFHAHMARTEIIGFLAGQWDAKSKELSIEEAFPCRAVQSDGDDASTNVEMDPSAEVELRDDIRRRNLSVVGWYHSHPTFKPIPSNRDVENQSNYQVLMRDETTGLEPFIGLVVGPFDQQMPSEASVMNWFYVNRKGAVEKCIPMVLDVEVGSDDVAKFTSAISKLSTAGGLAQGAADPSGVVTLREKLRASLKSRLTVGTAVDVDGKAEREARVDKTIEYMDSKWAV* # PASA_UPDATE: g5027.t1, single gene model update, valid-1, status:[pasa:asmbl_3235,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 79810 81830 . - . ID=g5027;Name=g5027.t1 NODE_1_length_123517_cov_42.9391 . mRNA 79810 81830 . - . ID=g5027.t1;Parent=g5027;Name=g5027.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 81774 81830 . - . ID=g5027.t1.utr5p1;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . exon 81514 81830 . - . ID=g5027.t1.exon1;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . CDS 81514 81773 . - 0 ID=cds.g5027.t1;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . exon 81085 81398 . - . ID=g5027.t1.exon2;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . CDS 81085 81398 . - 1 ID=cds.g5027.t1;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . exon 79810 81003 . - . ID=g5027.t1.exon3;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . CDS 79907 81003 . - 2 ID=cds.g5027.t1;Parent=g5027.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 79810 79906 . - . ID=g5027.t1.utr3p1;Parent=g5027.t1 #PROT g5027.t1 g5027 MAKRVAIIGAGCSGLASIKSCLEEGLQPVCFEQDADIGGLWRFSDKEGHSSIYRSTVINTSRELMPFSDFLIPHEWPTFLHNSDVYKYFQLYADKFGLRKYIHFETAVRSVVKSTAGAGKWDVAYESKQTGARTTDTFDAVFVCSGHHWDPYTAEFPGASTFEGSVSHSHAYKDFRPFEGKSTVIIGIGNSGVDLAVELSRHCPKVSLSTRSGAWVIPRSGLSGLPADHVANSRYIALLPLSLRSWIGEVLIKFQQGNMRSFGIHPDHRLYEAHPTVNSELIGRIASGAVAVRPNIARIQPRSVVYVDGTEEPCDAIVYCTGYRISFPFLDGSLLGLKAGSNTVELYKHVVPPQNSTLFFIGLVQPLGALMPISEIQSRWTARLVSGAACLPSTETMLKDIEAKRVAMRRRYRDRVRHTIQVDYIPIMDEFAELIGCKPPLLRLFFTNPRLWSMVVFGPASPPQYRLYGPGAWEGAPKAIEEIIDNVFTPYKSGGGAIDQKEEKAPSSVLGRLFRVALVAGVVVAVGHYKFGWTTHAVTTAVTGAVSHHLGHLIGK* # PASA_UPDATE: g5014.t1, single gene model update, valid-1, status:[pasa:asmbl_3215,status:3], valid-1 # PASA_UPDATE: g5014.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3214,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 30883 34345 . + . ID=g5014;Name=g5014.t1 NODE_1_length_123517_cov_42.9391 . mRNA 30883 34345 . + . ID=g5014.t1;Parent=g5014;Name=g5014.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 30883 30944 . + . ID=g5014.t1.utr5p1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 30883 31055 . + . ID=g5014.t1.exon1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 30945 31055 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 31144 31227 . + . ID=g5014.t1.exon2;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 31144 31227 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 31350 31440 . + . ID=g5014.t1.exon3;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 31350 31440 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 31527 31628 . + . ID=g5014.t1.exon4;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 31527 31628 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 31723 31809 . + . ID=g5014.t1.exon5;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 31723 31809 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 31897 32055 . + . ID=g5014.t1.exon6;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 31897 32055 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 32141 32233 . + . ID=g5014.t1.exon7;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 32141 32233 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 32334 32416 . + . ID=g5014.t1.exon8;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 32334 32416 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 32525 32644 . + . ID=g5014.t1.exon9;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 32525 32644 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 32727 32831 . + . ID=g5014.t1.exon10;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 32727 32831 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 32934 33012 . + . ID=g5014.t1.exon11;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 32934 33012 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 33131 33249 . + . ID=g5014.t1.exon12;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 33131 33249 . + 2 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 33334 33476 . + . ID=g5014.t1.exon13;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 33334 33476 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 33560 33659 . + . ID=g5014.t1.exon14;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 33560 33659 . + 1 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 33745 33891 . + . ID=g5014.t1.exon15;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 33745 33891 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 33974 34062 . + . ID=g5014.t1.exon16;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 33974 34062 . + 0 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . exon 34174 34345 . + . ID=g5014.t1.exon17;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . CDS 34174 34300 . + 1 ID=cds.g5014.t1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 34301 34345 . + . ID=g5014.t1.utr3p1;Parent=g5014.t1 NODE_1_length_123517_cov_42.9391 . mRNA 30883 34345 . + . ID=g5014.t1.1.5b6be70b;Parent=g5014;Name=g5014.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 30883 30944 . + . ID=g5014.t1.1.5b6be70b.utr5p1;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 30883 31055 . + . ID=g5014.t1.1.5b6be70b.exon1;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 30945 31055 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 31144 31227 . + . ID=g5014.t1.1.5b6be70b.exon2;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 31144 31227 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 31350 31440 . + . ID=g5014.t1.1.5b6be70b.exon3;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 31350 31440 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 31527 31628 . + . ID=g5014.t1.1.5b6be70b.exon4;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 31527 31628 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 31723 31809 . + . ID=g5014.t1.1.5b6be70b.exon5;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 31723 31809 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 31897 32055 . + . ID=g5014.t1.1.5b6be70b.exon6;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 31897 32055 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 32141 32233 . + . ID=g5014.t1.1.5b6be70b.exon7;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 32141 32233 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 32334 32416 . + . ID=g5014.t1.1.5b6be70b.exon8;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 32334 32416 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 32525 32644 . + . ID=g5014.t1.1.5b6be70b.exon9;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 32525 32644 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 32727 32831 . + . ID=g5014.t1.1.5b6be70b.exon10;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 32727 32831 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 32934 33012 . + . ID=g5014.t1.1.5b6be70b.exon11;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 32934 33012 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 33131 33249 . + . ID=g5014.t1.1.5b6be70b.exon12;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 33131 33249 . + 2 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 33334 33476 . + . ID=g5014.t1.1.5b6be70b.exon13;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 33334 33476 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 33560 33659 . + . ID=g5014.t1.1.5b6be70b.exon14;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 33560 33659 . + 1 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 33745 33891 . + . ID=g5014.t1.1.5b6be70b.exon15;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 33745 33891 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 33974 34345 . + . ID=g5014.t1.1.5b6be70b.exon16;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 33974 34066 . + 0 ID=cds.g5014.t1.1.5b6be70b;Parent=g5014.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . three_prime_UTR 34067 34345 . + . ID=g5014.t1.1.5b6be70b.utr3p1;Parent=g5014.t1.1.5b6be70b #PROT g5014.t1 g5014 MALRGHAESVIKNIVSEIITECKERGNDVSETLAAFVVKAVVLDPDNNFRVDENLTRSDVEVLKKLAVDKLTARGSASLDTIRLQVYFDTNYANPTDFVAEHSKVLRNKLQPILRDITDSRARTTSELEALYRKIVTYILLRSGMGSTTDMGVVREATAALESVLPQSELGTFLSLLKAEKEEQLEELTSIVSGIRLFNKNCGKGGQGIDDLPGILSNGVTLMAHTLQELLDGTLDLGSKYAALVDGGMAQLRANLINTRQHAVYLQQLQDDVTRSRQNLASLDDKFRERMQSLATLVKAKTAVPTDQVYPQFIALAHLWCGFQDEMILLNVRDALIPGMDEYTQTYRPEGMAPDLAAAIGSVVVPGAEGSDDEGEHTHARDRIDAASVRPLLAFYPEATPNYSRLPLEYKGFCAYTIAAKEGLLVPGAKEIGVLRYKENFFAFSSSAAAEAFSREPDRYIARVVDISKKCPELIHLLDLHRHMSVVNVDAKGDGSGTKRMVHVITKSDGGTQTDTHIVESHIDKKYDWNEWELRRKALRLVNLRNKATHSMQTDSSHFRRDNETQVFLPKIAATQTRKDASTKVPKQTNYFAGLRGSPTSNMKVVNLTFDF* #PROT g5014.t1.1.5b6be70b g5014 MALRGHAESVIKNIVSEIITECKERGNDVSETLAAFVVKAVVLDPDNNFRVDENLTRSDVEVLKKLAVDKLTARGSASLDTIRLQVYFDTNYANPTDFVAEHSKVLRNKLQPILRDITDSRARTTSELEALYRKIVTYILLRSGMGSTTDMGVVREATAALESVLPQSELGTFLSLLKAEKEEQLEELTSIVSGIRLFNKNCGKGGQGIDDLPGILSNGVTLMAHTLQELLDGTLDLGSKYAALVDGGMAQLRANLINTRQHAVYLQQLQDDVTRSRQNLASLDDKFRERMQSLATLVKAKTAVPTDQVYPQFIALAHLWCGFQDEMILLNVRDALIPGMDEYTQTYRPEGMAPDLAAAIGSVVVPGAEGSDDEGEHTHARDRIDAASVRPLLAFYPEATPNYSRLPLEYKGFCAYTIAAKEGLLVPGAKEIGVLRYKENFFAFSSSAAAEAFSREPDRYIARVVDISKKCPELIHLLDLHRHMSVVNVDAKGDGSGTKRMVHVITKSDGGTQTDTHIVESHIDKKYDWNEWELRRKALRLVNLRNKATHSMQTDSSHFRRDNETQVFLPK* # PASA_UPDATE: g5037.t1, single gene model update, valid-1, status:[pasa:asmbl_3236,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 104734 106195 . - . ID=g5037;Name=g5037.t1 NODE_1_length_123517_cov_42.9391 . mRNA 104734 106195 . - . ID=g5037.t1;Parent=g5037;Name=g5037.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 106079 106195 . - . ID=g5037.t1.utr5p1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . exon 106024 106195 . - . ID=g5037.t1.exon1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . CDS 106024 106078 . - 0 ID=cds.g5037.t1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . exon 105895 105937 . - . ID=g5037.t1.exon2;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . CDS 105895 105937 . - 2 ID=cds.g5037.t1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . exon 105664 105790 . - . ID=g5037.t1.exon3;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . CDS 105664 105790 . - 1 ID=cds.g5037.t1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . exon 105053 105544 . - . ID=g5037.t1.exon4;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . CDS 105053 105544 . - 0 ID=cds.g5037.t1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . exon 104734 104890 . - . ID=g5037.t1.exon5;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . CDS 104846 104890 . - 0 ID=cds.g5037.t1;Parent=g5037.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 104734 104845 . - . ID=g5037.t1.utr3p1;Parent=g5037.t1 #PROT g5037.t1 g5037 MEFPSLGKHCGLTTCKQLDFLPYTCDLCKTVFCHEHHAYEAHECQNLYAKDARVPQCPLCNTPVPFRRGEDPNRAVDEHIAEGCQRPAAIKTYANSCSFPSCKQREAVPIRCGTCRQNFCLKHRFEGDHKCGSPSPNAHPRPSPGQSSTLSSRTAQPPSRSESHQHPQQQQPLPTRMNAGGAAAERRRQEAQAGGRFGTATGRAHGGGPQGNNAATDDDEQLALAIQLSLQEEEERRRQEEAQSQQQSGCAVA* # PASA_UPDATE: g5011.t1, single gene model update, valid-1, status:[pasa:asmbl_3241,status:12],[pasa:asmbl_3242,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 24011 26835 . + . ID=g5011;Name=g5011.t1 NODE_1_length_123517_cov_42.9391 . mRNA 24011 26835 . + . ID=g5011.t1;Parent=g5011;Name=g5011.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 24011 24152 . + . ID=g5011.t1.utr5p1;Parent=g5011.t1 NODE_1_length_123517_cov_42.9391 . exon 24011 26835 . + . ID=g5011.t1.exon1;Parent=g5011.t1 NODE_1_length_123517_cov_42.9391 . CDS 24153 26705 . + 0 ID=cds.g5011.t1;Parent=g5011.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 26706 26835 . + . ID=g5011.t1.utr3p1;Parent=g5011.t1 #PROT g5011.t1 g5011 MEHLQQEIETLKQRERRLKAEEKALRKEQSRSRKQQQQRGSVKEPSGTKGGKKSKTKSGDSKGDSRGDVKGDSKGDWISLDAAGDGLAGLPPKWPPAELCGFMWKKRKRPQIGWHHRFFVLENAVLTYGRSLEHIRKGKIKGSLDVAHAEIAALPSKQRIDIDGETTIFHLQAYSDEDFTKWTAALKEHRAGARSLGTRRKSRVAELAGGDGFLAATKQAEGALAEARSIVAKMTESIAAHRTGTPHSSLRRFQSSDELRQRVAGRSESVDALPASSRRSVPSASGSITTGAHDVGEAEYVTLATRACTILTGVIESVTAERTSVAAARQGQTHEQLGDARARVAMLEAENASLRACIERIAAIATSDAVRKPHDEPSTGTPSLRRRGDLRRRASVASIDSMEAAEFFDACEEFDSSDSSADTGESDDANSVSEHGGEAGSEIGSISGAGQTSDSTSSSALAAVSSEPNVARRMQLPNERPPDGDVSLWSVLRKNIGKDLSKISMPVTLNEPLGALQRLCEELDYASLLDDAAALDDPIDRMVRVAAFAVSAYAGSQHRAGKKPFNPVLGETYECVRPDRGFAFVAEQVSHHPPVSACYCVGGNFRFWQELQIKNKFWGKSMEVFPSGAVHVTLPSRGDHYEWSKVTTCVHNIMSGDKWVDHYGTMEIRNDRAGVVCRLEFARSGMFGAASTAVSGRVLVGNKAVRTIAGTWDASLECAPAEGGGAPQVIWRATPAPANAARFYGFSQFALELNELHPHMTKVLPHTDTRFRPDQRALEDGDVRSAEDAKSRVETIQRESRKEREKAGVEWYPRYFAPTEGSSSGSQWAWNSRYWMERQSGHWSPCPPLW* # PASA_UPDATE: g5043.t1, single gene model update, valid-1, status:[pasa:asmbl_3245,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 122664 123109 . - . ID=g5043;Name=g5043.t1 NODE_1_length_123517_cov_42.9391 . mRNA 122664 123109 . - . ID=g5043.t1;Parent=g5043;Name=g5043.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 123092 123109 . - . ID=g5043.t1.utr5p1;Parent=g5043.t1 NODE_1_length_123517_cov_42.9391 . exon 122664 123109 . - . ID=g5043.t1.exon1;Parent=g5043.t1 NODE_1_length_123517_cov_42.9391 . CDS 122684 123091 . - 0 ID=cds.g5043.t1;Parent=g5043.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 122664 122683 . - . ID=g5043.t1.utr3p1;Parent=g5043.t1 #PROT g5043.t1 g5043 MQVVPLPEGAPIETLLPINGEDDVDGRPQSLPSLPFRHAFARVNDKEATGDILARQYSALLESLGLRERPAAQSYNFLLTRRWMLVVPRRLEKFGTLSVNSVAFSGNLFVKNPADMQLVQSNGPLKILADVAEAK* # PASA_UPDATE: g5041.t1, single gene model update, valid-1, status:[pasa:asmbl_3238,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 117716 120133 . - . ID=g5041;Name=g5041.t1 NODE_1_length_123517_cov_42.9391 . mRNA 117716 120133 . - . ID=g5041.t1;Parent=g5041;Name=g5041.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 120086 120133 . - . ID=g5041.t1.utr5p1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 119995 120133 . - . ID=g5041.t1.exon1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 119995 120085 . - 0 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 119846 119884 . - . ID=g5041.t1.exon2;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 119846 119884 . - 2 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 118978 119746 . - . ID=g5041.t1.exon3;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 118978 119746 . - 2 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 118602 118822 . - . ID=g5041.t1.exon4;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 118602 118822 . - 1 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 118239 118416 . - . ID=g5041.t1.exon5;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 118239 118416 . - 2 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . exon 117716 117937 . - . ID=g5041.t1.exon6;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . CDS 117769 117937 . - 1 ID=cds.g5041.t1;Parent=g5041.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 117716 117768 . - . ID=g5041.t1.utr3p1;Parent=g5041.t1 #PROT g5041.t1 g5041 MSNSQTSGFGQAAWWGFTPAIDFQDPLQHGDDISRQLESLSVKDDAGSGAKLTVLQVGAGDPRHLFLTFSRLMRHPRRNVEVHVIEAGSECLARVLLLLAIATEDPNVMGLQEKTETFLELFGNGLVRAKTADYLKQKATELIKMVTDDAELARRMPFCDISQLKFKDRDVIESVLNTWRGKDPFDFANLWDERLRQYYGLRYDARLNVVDWDYSMKLLEMAPIIAPVEFREWRQSCIAYAGREGAYTLPNRTLATRVAAPSAPSGPGRLAYLGDVAMGPYACFGIVTEHDDLLKKANDKFVYGAQAVSERNVAAAIHELYTGTPYSAEHAEQPRPRKAEDGKEPEAASASTDCTKPNDATHTSADGSASPLKGGHFTIKFLSPSLAVDLESRAKHAQQYDVAYYSNTMVHHLRQGIAAVLKDNALVIVESARFILDLRKEQVAEYLKRVVGMAAAAGCQPIVGPKDTAQSIVSANYAVFRHNRKSSS* # ORIGINAL: g5031.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 89369 89845 . - . ID=g5031;Name=g5031.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 89369 89845 . - . ID=g5031.t1;Parent=g5031;Name=g5031.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 89369 89845 . - . ID=g5031.t1.exon1;Parent=g5031.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 89369 89845 . - 0 ID=cds.g5031.t1;Parent=g5031.t1 #PROT g5031.t1 g5031 MLTRVIGLCRLTPRYLDSSASFGQRTAAAGAAVGGPRGMHTEPSGDHRHHRPGGHSTTGHATTQAPNPPQHNTGDTATHAKHTGIKSVLKAAEPALKFKEETSAGLDDVDPVFTRDCHGNLIAETPNGPAKVPKTSKVAEHPELEVSKKLHDHMHMSH* # ORIGINAL: g5038.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 106892 112667 . + . ID=g5038;Name=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 106892 112667 . + . ID=g5038.t1;Parent=g5038;Name=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 106892 106907 . + . ID=g5038.t1.exon1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 106892 106907 . + 0 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 107030 107130 . + . ID=g5038.t1.exon2;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 107030 107130 . + 2 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 107297 107422 . + . ID=g5038.t1.exon3;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 107297 107422 . + 0 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 107555 107737 . + . ID=g5038.t1.exon4;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 107555 107737 . + 0 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 107896 107975 . + . ID=g5038.t1.exon5;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 107896 107975 . + 0 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 108190 109988 . + . ID=g5038.t1.exon6;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 108190 109988 . + 1 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 110140 111339 . + . ID=g5038.t1.exon7;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 110140 111339 . + 2 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 111501 111776 . + . ID=g5038.t1.exon8;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 111501 111776 . + 2 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 111886 112162 . + . ID=g5038.t1.exon9;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 111886 112162 . + 2 ID=cds.g5038.t1;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 112376 112667 . + . ID=g5038.t1.exon10;Parent=g5038.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 112376 112667 . + 1 ID=cds.g5038.t1;Parent=g5038.t1 #PROT g5038.t1 g5038 MWRFGDLVSRQPKLSDAEARMYEDTKKDLISRTAKAQAELLNRFIEEDGAINDGNNPHLHELCEALEAVFLHGLRGGLKKKIAEVRDKMQAVLENTHHSQHNYDNGASPTFWTFVANFTRKNAVHMVTHELDGVHTEVGYCRAWIRMALNEGALDNYLEVIADHPRLIREHYERWALLADAERFMTLRTLVRGIASLAFDLPLDDASLNYWTVPAAALSPDCEHQMRTLRSTSKTNQDDDAKPRSMSAGYKSGGGGGFASQEHADPLGRFRSQSDTHAVQELTMAAIDPTLVGSRNTSIAEDHSGLARAAVDAAQTAVTLLLNEAASSIPCAKSLSTEDDAASVSVFVAAELASDETVPTGLLLSNLAEAALRLSGPCQNGSPVGEGSETVDAGTCGEKDEEERGVCASESDGLPFVLSNAIPAYACENALPSGNYNVDEVMDGDTHGGCAAGIVERGNDTSAICIDAAGDALVWVEDPANVETVVSTSSPATNEPRCDDGEAIAVAVAVGEVLPELPGGDAYHPGDATSDERADRSDQSDQVAAVDVLLVPSVSVNIDGHEEAAPPAAPMPDFVEVSEASPAAHSVDALEDHTEGETRPVEDGVWRSISAGDSILRDSENEDATATTSDDTAIASCHAIVASCVEVAATTCSVVGFPATTDPSETPCAVSDDAFDGIVHIAAPAGEASSPAVVQSNCESETADADTGGESTGGAVDSAHTDGPAPGTSPVVRADDGIVHGAVAPAMSLPKRDVKGKSKNLSAVPTTKDSSSRSKKRSKKVAYIGDAPSLSSLPKGGSPSDHVPWEPPRPLPRSSADNMPIPTAGDWSAVAAELMGSTERDGQVDDGRVAHAGDAYESSAVVHKSAPIPVPADPRRIHTLSAGDDGCSSASASPSVVAWSVDGLSPMDGVSMAVTGLSHDPSGAWDVWASAGGPLPQTGVLSHLPGSSPRDAVCLDTEIIDKQAAAESDDASEHFEDAEDFSEMVFRRAQQQTTSIPSFVRDALRAIDAASGVDATSGADQPTPDATSSDTLPTGDSNSVPHSHDAPADEGTARVTNADSTHVATTANNPANEPIDAGASSPVDSTDPSPDLSPDATGDGSSSHDLLSNGWPQIATGESGDGQQPADASYNSVRSTLLVGTLNATVSVYAASKSWANWGIGQLSGYAQAATEKIYGQGSDGKPLSDGDASVSRGAILSAEETDDDALAIDYNDTRSLTLLAKVFELCPEKGLDAQNYKCEGCEKPIGPAANAEALLCDYDGRYYCATCHIGDTHVVPARVLHNWDFRTYPVSRSVAEFLAFIGDQEIFDVAKFNAHLYELVADLAACQDLRMELAREWKPIAACSTESAAALRKRLWPREYHASSIDLYSLSDLLQVKGGTLLPHLRALVADAAKHGSECVECVNWADMHVAADWEAAARTTVRDMHAHVTPRPILRDVSLEGPQTQLQ* # PASA_UPDATE: g5015.t1, single gene model update, valid-1, status:[pasa:asmbl_3216,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 36474 37660 . + . ID=g5015;Name=g5015.t1 NODE_1_length_123517_cov_42.9391 . mRNA 36474 37660 . + . ID=g5015.t1;Parent=g5015;Name=g5015.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 36474 36560 . + . ID=g5015.t1.utr5p1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . exon 36474 36563 . + . ID=g5015.t1.exon1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . CDS 36561 36563 . + 0 ID=cds.g5015.t1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . exon 36695 36722 . + . ID=g5015.t1.exon2;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . CDS 36695 36722 . + 0 ID=cds.g5015.t1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . exon 36974 37117 . + . ID=g5015.t1.exon3;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . CDS 36974 37117 . + 2 ID=cds.g5015.t1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . exon 37205 37447 . + . ID=g5015.t1.exon4;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . CDS 37205 37447 . + 2 ID=cds.g5015.t1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . exon 37556 37660 . + . ID=g5015.t1.exon5;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . CDS 37556 37584 . + 2 ID=cds.g5015.t1;Parent=g5015.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 37585 37660 . + . ID=g5015.t1.utr3p1;Parent=g5015.t1 #PROT g5015.t1 g5015 MSGLNEDQIAEYKEGFILFDKKGDNKIALPDLGRVLRSLGQNPTEAEVKKTVDEIDPTATKRIGFEEFLPILTRQRKETAKESDFIEGLKVFDKDGNGFMNAAELRHVLTSLGEKLSDDDVDQLLQGVEIDKDGSINYEEFVKLVMSS* # PASA_UPDATE: g5001.t1, single gene model update, valid-1, status:[pasa:asmbl_3211,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 2673 5193 . + . ID=g5001;Name=g5001.t1 NODE_1_length_123517_cov_42.9391 . mRNA 2673 5193 . + . ID=g5001.t1;Parent=g5001;Name=g5001.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 2673 2762 . + . ID=g5001.t1.utr5p1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 2673 2898 . + . ID=g5001.t1.exon1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 2763 2898 . + 0 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 3021 3076 . + . ID=g5001.t1.exon2;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 3021 3076 . + 2 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 3328 3420 . + . ID=g5001.t1.exon3;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 3328 3420 . + 0 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 3628 3841 . + . ID=g5001.t1.exon4;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 3628 3841 . + 0 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 4032 4300 . + . ID=g5001.t1.exon5;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 4032 4300 . + 2 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 4503 4679 . + . ID=g5001.t1.exon6;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 4503 4679 . + 0 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . exon 4994 5193 . + . ID=g5001.t1.exon7;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . CDS 4994 5074 . + 0 ID=cds.g5001.t1;Parent=g5001.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 5075 5193 . + . ID=g5001.t1.utr3p1;Parent=g5001.t1 #PROT g5001.t1 g5001 MASIPATMRAAQYEGYGEAGDIIKIVTDRPVPKPAAGSLLIKIHAASINPIDYKLSHGFLRLIQSKSAFPFVPGFDFAGVVVDANGSSKFKNGDEVHGMNAFPSCGTMAEYASVQEILLARKPSNLSFAEAATLPLAGLTSYQSLKNFAQIRPGQRVLVLGGSGGTGIFGIQYAHHVGCHVITTCSARNVDFVRNFGADETIDYTKDDFATVLKDNPVDVVYDCVGGYDNWVKAQLITKKGGSFVTLTGDSAAEMTVGRLLDIGGKMVFRKTAALFGSNPHYYLPTTKSNGVELEEFRALVEKGIIRTHIDKTFTLEEAAEMFKYSESGRTRGKTAMLVVA* # PASA_UPDATE: g5028.t1, single gene model update, valid-1, status:[pasa:asmbl_3223,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 82382 84128 . + . ID=g5028;Name=g5028.t1 NODE_1_length_123517_cov_42.9391 . mRNA 82382 84128 . + . ID=g5028.t1;Parent=g5028;Name=g5028.t1 NODE_1_length_123517_cov_42.9391 . exon 82382 82453 . + . ID=g5028.t1.exon1;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . CDS 82382 82453 . + 0 ID=cds.g5028.t1;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . exon 82620 83062 . + . ID=g5028.t1.exon2;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . CDS 82620 83062 . + 0 ID=cds.g5028.t1;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . exon 83202 83567 . + . ID=g5028.t1.exon3;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . CDS 83202 83567 . + 1 ID=cds.g5028.t1;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . exon 83761 84128 . + . ID=g5028.t1.exon4;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . CDS 83761 83884 . + 1 ID=cds.g5028.t1;Parent=g5028.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 83885 84128 . + . ID=g5028.t1.utr3p1;Parent=g5028.t1 #PROT g5028.t1 g5028 MCTVQEEVFVAEEAVGPLPIVRLEAHGISAVDIRKLEEGGYHTVESIAYSTKKSLLTVKGISEAKADKILAEASKLVPMGFTTATEFHQRRSEIIHLTSGSAELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIEQGGGEGKCLYIDTEGTFRPERLLAVAERYGLSGADVLDNVAYARAYNSDHQLQLLMQAAAMMAESRFALLIVDSATALYRTDYSGRGELSSRQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIMAHASTTRLYLRKGRGETRICKIYDSPCLPESEAMFAINADGIGDSKD* # PASA_UPDATE: g5018.t1, single gene model update, valid-1, status:[pasa:asmbl_3218,status:12],[pasa:asmbl_3219,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 41455 44801 . + . ID=g5018;Name=g5018.t1 NODE_1_length_123517_cov_42.9391 . mRNA 41455 44801 . + . ID=g5018.t1;Parent=g5018;Name=g5018.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 41455 41520 . + . ID=g5018.t1.utr5p1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 41455 42868 . + . ID=g5018.t1.exon1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 41521 42868 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 42967 43131 . + . ID=g5018.t1.exon2;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 42967 43131 . + 2 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 43315 43481 . + . ID=g5018.t1.exon3;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 43315 43481 . + 2 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 43563 43676 . + . ID=g5018.t1.exon4;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 43563 43676 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 43760 43864 . + . ID=g5018.t1.exon5;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 43760 43864 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 43997 44044 . + . ID=g5018.t1.exon6;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 43997 44044 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 44115 44252 . + . ID=g5018.t1.exon7;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 44115 44252 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 44358 44507 . + . ID=g5018.t1.exon8;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 44358 44507 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . exon 44598 44801 . + . ID=g5018.t1.exon9;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . CDS 44598 44705 . + 0 ID=cds.g5018.t1;Parent=g5018.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 44706 44801 . + . ID=g5018.t1.utr3p1;Parent=g5018.t1 #PROT g5018.t1 g5018 MVYPNSDEKSSTSSRKTSEFSVGMTEPGGGAPATSLFAFGYQDFGTPFGGAPGEDVTSSSGGGPGAAQPLGQPSSAAHTKNTHPLVATSEPKASTESEGPAHYGGYSVEPDALWTPIPAYTGVSLNESPDSAVVKSQARFDYGPALDDSFAQVAAATSTAQFSDRGLLIFGEGGTGHAHGATMPHQEPTESYVPPIPPTLPAKPVTVEGVINEPLQQQPSSVETVQMRPVDVQPTHNQSQGSRFRPRNAQHPAQHHGLYAMQYSVHPNGGYALARHSGIDAMETAYALELGYSGDRPPFRGGHGHTPFGSLGYAVAMHPSGYVTRSQDDGDTSAESWDGSYAPLMTGAAAGMPFPAVVAHARYGGVKLPHVGHTQVPMCRYFQQGYCRHGDRCNFAHTGEPLSETVPTPQSTAINENGYRSGRSTGRVSAGMRTVQPAGGKGHKRASSEGARYSSLDQVVGKMYGLCKDQHGCRFLQRKLEEQNERVVQAIFDEVVEHIVELMTDPFGNYLCQKLVEFCDDEQRTTIVLRTSAELVSISLNMHGTRAAQKLIECISQPVQISSVVRALQGSVVPLIKDLNGNHVIQRCLQRFSPLDNQFIYDAVASHCIEVATHRHGCCVIQRCVDYAADAQKNQLVGEITRNGLMLVQDAFGNYVVQYVLELKDPAFTDALIQRFLGNIGLLAAQKFSSNVIEKCVRVAEGATRTALLEEVIEAKWLPRLLQDPYGNYVIQTALSMCDARQFNILVEGIRPHLGLIRHTAYGKKIEAKLAAVSKWHMKK* # PASA_UPDATE: g5023.t1, single gene model update, valid-1, status:[pasa:asmbl_3221,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 55174 60799 . + . ID=g5023;Name=g5023.t1 NODE_1_length_123517_cov_42.9391 . mRNA 55174 60799 . + . ID=g5023.t1;Parent=g5023;Name=g5023.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 55174 55323 . + . ID=g5023.t1.utr5p1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 55174 55440 . + . ID=g5023.t1.exon1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 55324 55440 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 55679 55757 . + . ID=g5023.t1.exon2;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 55679 55757 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 55861 55967 . + . ID=g5023.t1.exon3;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 55861 55967 . + 2 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 56086 56214 . + . ID=g5023.t1.exon4;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 56086 56214 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 56596 56708 . + . ID=g5023.t1.exon5;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 56596 56708 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 56854 56998 . + . ID=g5023.t1.exon6;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 56854 56998 . + 1 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 57163 57342 . + . ID=g5023.t1.exon7;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 57163 57342 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 57476 57688 . + . ID=g5023.t1.exon8;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 57476 57688 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 57850 58140 . + . ID=g5023.t1.exon9;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 57850 58140 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 58394 58618 . + . ID=g5023.t1.exon10;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 58394 58618 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 58814 59137 . + . ID=g5023.t1.exon11;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 58814 59137 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 59351 59569 . + . ID=g5023.t1.exon12;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 59351 59569 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 59711 59828 . + . ID=g5023.t1.exon13;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 59711 59828 . + 0 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 60066 60228 . + . ID=g5023.t1.exon14;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 60066 60228 . + 2 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . exon 60484 60799 . + . ID=g5023.t1.exon15;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . CDS 60484 60583 . + 1 ID=cds.g5023.t1;Parent=g5023.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 60584 60799 . + . ID=g5023.t1.utr3p1;Parent=g5023.t1 #PROT g5023.t1 g5023 MGSLFRSEEMELVQLLIQLEAAYETVSELGEIGLVQFIDLNPDVTAFQRNFVHDVRRCDEMDRKTRYFYSLMDAYKVRAAEVPDEELLSHRPQTQDMSRLESTLEELEVELKEIQSNEEMLERNFTELTDLRQILRKTATFFAEADGYGAFSEAPATQSDELSLLHGVDLEAQHHGRTVRLGFVTGVINTEKITAFERVLWRATRGNAFLRHVDADDEVGIAVPTPAAPTKVKAPKRSVFIVFFQGQQLEAKTRKICEGFGATVYPCPETPAERRELVLQVATRLEDLQSVLAKTTEHRNRVLSNVATEINSWDIRIKKMKSIYHTMNMFRTDVTRKALVAEGWVPKSSMQSVQLALRRAMERSGSSMAPILHRLDTKLTPPTYHKTNKFTAGFQSIVDAFGIASYREVNPGPFTIITFPFIFAIMFGDFGHGIIMMLAALFLCVREKQLAKFKAGGEIFDTMFAGRYIILLMGIFSMYTGLIYNDMFSKSLDIFGSSWKIPASTEDEVLKYTVDGKGPYTFSGSAYPFGIDPHWSLADNRLTFLNSYKMKMAVIIGVTQMLFGVSLGLFNHRYFRRPINIFCEWIPQVLFLVCIFGYLCFMIIYKWANPGNAPSVLLALINMFLKSGEEIPTSDLLYASQHAVQGKLVALALICVPWMLLLKPAILWYLNRRRTLHGGAISASAPATVGEEDDDVLGGDSHAPHAVDEHDEDEFEFGEVMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAELSDVLWTMIFRKGFQSTNPIILLAAFAFWAVLTIAVLLIMEGLSAFLHALRLHWVEFQGKFYDGNGRNFQPFSFESQFTGRGEEDE* # PASA_UPDATE: g5039.t1, single gene model update, valid-1, status:[pasa:asmbl_3237,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 112985 113893 . - . ID=g5039;Name=g5039.t1 NODE_1_length_123517_cov_42.9391 . mRNA 112985 113893 . - . ID=g5039.t1;Parent=g5039;Name=g5039.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 113773 113893 . - . ID=g5039.t1.utr5p1;Parent=g5039.t1 NODE_1_length_123517_cov_42.9391 . exon 113607 113893 . - . ID=g5039.t1.exon1;Parent=g5039.t1 NODE_1_length_123517_cov_42.9391 . CDS 113607 113772 . - 0 ID=cds.g5039.t1;Parent=g5039.t1 NODE_1_length_123517_cov_42.9391 . exon 112985 113317 . - . ID=g5039.t1.exon2;Parent=g5039.t1 NODE_1_length_123517_cov_42.9391 . CDS 113019 113317 . - 2 ID=cds.g5039.t1;Parent=g5039.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 112985 113018 . - . ID=g5039.t1.utr3p1;Parent=g5039.t1 #PROT g5039.t1 g5039 MHLEQRCYFASILLNGIFAGAFTFASAVDARYLITLCDKKEADLLRRMFPIWWPFGKDLMVPLNLFCIFSNALVYYFTGESVWLLTSALCVFPLVWTVVAMAPTIVSLQSARDELPDDEDLYVAVRKFCRLHLVRLVAMLAAATITAHTVATKA* # ORIGINAL: g5032.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 90647 93074 . - . ID=g5032;Name=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 90647 93074 . - . ID=g5032.t1;Parent=g5032;Name=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 92967 93074 . - . ID=g5032.t1.exon1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 92967 93074 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 92732 92817 . - . ID=g5032.t1.exon2;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 92732 92817 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 92455 92527 . - . ID=g5032.t1.exon3;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 92455 92527 . - 1 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 92128 92295 . - . ID=g5032.t1.exon4;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 92128 92295 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 91569 91928 . - . ID=g5032.t1.exon5;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 91569 91928 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 90873 91337 . - . ID=g5032.t1.exon6;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 90873 91337 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 90647 90757 . - . ID=g5032.t1.exon7;Parent=g5032.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 90647 90757 . - 0 ID=cds.g5032.t1;Parent=g5032.t1 #PROT g5032.t1 g5032 MPTHVPNKERFNIAVNAVQNLPKDGPFNPTNEQKLKFYSAFKQATEGPCDKPKPSFWDVVAKAKWEAWKGLGNMSKNDAMQAYVDNLLTIARTLPKMPELDEFMRKMGEDEIPAAETEQEAASTESPAEASIAAATHSEAEDDGQRGGALPGRQTKANSGSTPTAKRKHPPADVANGVNGTDPRALHPTHALPTPGAGGRDASPSMSLSPSGSVGVGIGSLLSPLPTRASGLVQGAGGNVRETAILRRSSLSGRIALLADRSGASESDGDTDAGRESATSSSRANGGHASPRSTATDDDSDVFCDPLDLPPASHGQFVTSTEHGSGSVGDDGRGVFSSSTSNGGHGIAAASHPSGGHVVTKAAAASASVDEVRKIMLRTQQDLERTVSRVAALEAAVEELRKRPAAGASPTAKQTLPADEFEWPLAGVSRNSKIFLVLWPVVVHLIFRLLSRRSRR* # ORIGINAL: g5008.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 18483 19606 . + . ID=g5008;Name=g5008.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 18483 19606 . + . ID=g5008.t1;Parent=g5008;Name=g5008.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 18483 18823 . + . ID=g5008.t1.exon1;Parent=g5008.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 18483 18823 . + 0 ID=cds.g5008.t1;Parent=g5008.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 18958 19606 . + . ID=g5008.t1.exon2;Parent=g5008.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 18958 19606 . + 1 ID=cds.g5008.t1;Parent=g5008.t1 #PROT g5008.t1 g5008 MSAVIANDRAVLPLNGRADSAQTARPIKRKLHNYLLGGMASMFACLFSNPLEVVKTRMQLQGELQSRKAAQRTYNSVFHAFYTIAKKEGLRGVQSGIVPALGYQLTMNGTRLGCYEPFRDTLATLEALRTHPTLTNIAAGASAGVVGSIVGSPFFLVKTRLQSQSSAAAFGHQHHYRGVMHGFVQIVKTEGPRGLMRGVTGCIPRVAVGSAVQLSTYDHFKIHLIDTGVVAKEGVLLHFLSSLCAGLMVTIAMNPFDVVSTRLYNQAVVNGRGALYDGVLDCMHKVATREGPAAFYKGFTAQYMRLAPHTVLTMITWEFLKKVSANAGI* # PASA_UPDATE: g5002.t1, single gene model update, valid-1, status:[pasa:asmbl_3227,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 5632 8578 . - . ID=g5002;Name=g5002.t1 NODE_1_length_123517_cov_42.9391 . mRNA 5632 8578 . - . ID=g5002.t1;Parent=g5002;Name=g5002.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 8401 8578 . - . ID=g5002.t1.utr5p1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 8100 8578 . - . ID=g5002.t1.exon1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 8100 8400 . - 0 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 7633 7992 . - . ID=g5002.t1.exon2;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 7633 7992 . - 2 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 7252 7518 . - . ID=g5002.t1.exon3;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 7252 7518 . - 2 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 7001 7129 . - . ID=g5002.t1.exon4;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 7001 7129 . - 2 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 6647 6770 . - . ID=g5002.t1.exon5;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 6647 6770 . - 2 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 6466 6548 . - . ID=g5002.t1.exon6;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 6466 6548 . - 1 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . exon 5632 6323 . - . ID=g5002.t1.exon7;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . CDS 5734 6323 . - 2 ID=cds.g5002.t1;Parent=g5002.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 5632 5733 . - . ID=g5002.t1.utr3p1;Parent=g5002.t1 #PROT g5002.t1 g5002 MPPRQIHAAVAVARIVQHTTRVQYSASRVGIPSVSLAGCESRALPASQVRWFAHGATGDDKGHHRNHNNDSPGRESALQDGRTGRPTLELKSHSVAASAEDKGDTLPARDFIVRQKIPRVKNAWLEFTRTASGDVVSRRVFITQPFDDPADVEDTSRRRRERETDDAGGRKGVFQRAKEAFLHKVYDVFFPKGYPQTVTPNFMSYSKWQATQTAVGAMTGVLSTQALLYAVGLGAGSIPVAAAVNWVVKDGLGQLGGVLYATFVNNEFDSDPKRHRFQAVLILQGSTFLEILTPLVPQLFLLLASISNIGKNMSWIATSASRAQMHNSFTLTDNLGDVTAKTTSQSVAASLVGTALGVAMAPLIGTSSVNVMIAFAPLALLNVYANYRSNQYVRMRTLNVQRCELLILDLLLKHPPPPPPADSVCEYVQVPRLPVDFRLLTPADVCEKETFVIKYRSVFNVPLLLEPPLEDVVMKQSGGDGAAPAVRLEAVAGGANLARPEQYSIVFSGDRKGPPSVCLWYFEHAGPIDVLLGFFHACVLRHIMHQYGAPLLADRSTGAVAEGVARPLTEGQLRLMSLHSQRYVHTVLPDIGDALQASGWFVRTVYLGEGGARLDVD* # PASA_UPDATE: g5022.t1, single gene model update, valid-1, status:[pasa:asmbl_3220,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 50869 54888 . + . ID=g5022;Name=g5022.t1 NODE_1_length_123517_cov_42.9391 . mRNA 50869 54888 . + . ID=g5022.t1;Parent=g5022;Name=g5022.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 50869 50991 . + . ID=g5022.t1.utr5p1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 50869 51102 . + . ID=g5022.t1.exon1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 50992 51102 . + 0 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 51187 51631 . + . ID=g5022.t1.exon2;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 51187 51631 . + 0 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 51750 53117 . + . ID=g5022.t1.exon3;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 51750 53117 . + 2 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 53241 53552 . + . ID=g5022.t1.exon4;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 53241 53552 . + 2 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 53689 53808 . + . ID=g5022.t1.exon5;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 53689 53808 . + 2 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 53916 54184 . + . ID=g5022.t1.exon6;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 53916 54184 . + 2 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 54276 54410 . + . ID=g5022.t1.exon7;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 54276 54410 . + 0 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 54497 54631 . + . ID=g5022.t1.exon8;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 54497 54631 . + 0 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . exon 54747 54888 . + . ID=g5022.t1.exon9;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . CDS 54747 54818 . + 0 ID=cds.g5022.t1;Parent=g5022.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 54819 54888 . + . ID=g5022.t1.utr3p1;Parent=g5022.t1 #PROT g5022.t1 g5022 MVRRKENGAPQADDFERAAFVARFDPVRQHLNKFSKKYIPSEGITNKYLAKLTQGLLQYQEDHFGRNSTAPPMTKVPAKLFLDFSAGGGLCVVLSTALRFRSEHNLPALNLQGKNPEQYAQLFKEIENAVQDAKLYSFPRVFFAPSISDVDAKRLGEIIKRRQGNVTRDKAAATHVVHASAAGTFGDEEYYRAIGSCGEFVLVHFWYTPDSYDVWLPEDETEDPELDPVHEGAWNVAERWIEDTDKYNEWMNEEDYELSSLDIARAGEAQGTEQRAGRAGRGGKRSGKATAETERGASAKRARKSESPEPERSVKRAKTAEEKGKEAEEKEKAPDVPAVPHVKKTSVEQITPASKPANPEAAPIKGGTILNISNSAGAPLDAEVEKAADATTDVLMGEADAARTEIESGKEVPNEGEDALDDLEGEDVLAHQTVAVVVPSHAAWFDYNAIHHIEKRALPEFFNGKNRSKTPEIYMAYRNFMIDAHRLNPTEYLTATACRRNLAGDVCAIVRVHAFLEQWGLINYQVDPETRPSPMGPPSTSHFAITYDTPLGLRPAIAPVLSQATGNSLTWAETKRVTSTSTAAAQPSQLLFQAHQAPARAGAPLGAPKVAGSKCFSCGGQCGGGYYKSSDYALCASCYLQGRFPVDRPSTDFVKVGSSDDSRADWTEAETLRLLEVSEHRHGSHWRDCVPVLIFTHVHQQAIESHKDDWNKVAEHVGSRTQEECILRFLRMPIEDTFLELDGGLALESVPVPFSKANNPLMSTIAFLASAVEPSVAAAAAKAALGAFFGDAAKDPSEAKVDAKVANALESQPEPRATEETVNSASTAMEVDGTPAETAAVSEGAAVHMSEPSEGNIAHSADKAESAIEIDQNVVAVQPTESASEIAKKAVDEKTSQRGNFGNYASAAAAALSSAAVKAKVIAINEERHAAGLVSQLVECQLRKLEIKLRHFDELEAMLHKEREQLEQQRQQLYTERLQFQAQKLQSD* # ORIGINAL: g5040.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 115579 117610 . + . ID=g5040;Name=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 115579 117610 . + . ID=g5040.t1;Parent=g5040;Name=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 115579 115648 . + . ID=g5040.t1.exon1;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 115579 115648 . + 0 ID=cds.g5040.t1;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 115772 116077 . + . ID=g5040.t1.exon2;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 115772 116077 . + 2 ID=cds.g5040.t1;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 116203 116735 . + . ID=g5040.t1.exon3;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 116203 116735 . + 2 ID=cds.g5040.t1;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 117239 117610 . + . ID=g5040.t1.exon4;Parent=g5040.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 117239 117610 . + 0 ID=cds.g5040.t1;Parent=g5040.t1 #PROT g5040.t1 g5040 MRAVYMAALVSACTMLVTAAPPADIKYVGLAGNVEVVGLHFDVEPHALGPAWAANTTTIATGFLDLLSQASPAWQSQSSLPITWDLPVWYDTVVLTYKGETRKMSELVIDRMPRVGLMDFRDEYTRLVSDADDEAAYAQQTGKQFVLAVETQNMTDSPHISFWDLGPQKMKETLLQVDAHYKPKSMWGGVIIHDYHALQIMPNSANGFPYPAAELRVFLYIWQWQIAHAKSERRKLWAYIQGSAFKVHTLLFESEDLLKSNPGILQSFVNEAAQQGYKVELTMGFSKWALPEYHAYVMNMIQYGPAAATTTAAPPVSSDVAVTQTSAAASTTANPVTSQLPAVSIPAVVTSQASTRRDTTSTAAPATSTANARSPSSSSHAQQPLGTSPAVTDDIQASNSASGASSVHFAFVATACAFFASIAIFL* # PASA_UPDATE: g5016.t1, single gene model update, valid-1, status:[pasa:asmbl_3217,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 37899 39156 . + . ID=g5016;Name=g5016.t1 NODE_1_length_123517_cov_42.9391 . mRNA 37899 39156 . + . ID=g5016.t1;Parent=g5016;Name=g5016.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 37899 37956 . + . ID=g5016.t1.utr5p1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . exon 37899 38302 . + . ID=g5016.t1.exon1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . CDS 37957 38302 . + 0 ID=cds.g5016.t1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . exon 38441 38547 . + . ID=g5016.t1.exon2;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . CDS 38441 38547 . + 2 ID=cds.g5016.t1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . exon 38630 38702 . + . ID=g5016.t1.exon3;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . CDS 38630 38702 . + 0 ID=cds.g5016.t1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . exon 38810 39156 . + . ID=g5016.t1.exon4;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . CDS 38810 38961 . + 2 ID=cds.g5016.t1;Parent=g5016.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 38962 39156 . + . ID=g5016.t1.utr3p1;Parent=g5016.t1 #PROT g5016.t1 g5016 MMSSVLLRRTGVAGLAMSAARAKHTLPDLPYDYNALEPTISADIMRIHHDKHHRAYVTNLNVAEEKLNEAIAKNDVSGVVAVQSAFKFNGGGHINHSIFWTNLSPTNKEGGKPPTGDFAKAFNAEFGSLESFIEKFNAASVGVQGSGWGWLGYDKNKKRLAIATCPNQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVVNWSNVADRFKAASASK* # PASA_UPDATE: g5026.t1, single gene model update, valid-1, status:[pasa:asmbl_3222,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 78101 79793 . + . ID=g5026;Name=g5026.t1 NODE_1_length_123517_cov_42.9391 . mRNA 78101 79793 . + . ID=g5026.t1;Parent=g5026;Name=g5026.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 78101 78300 . + . ID=g5026.t1.utr5p1;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . exon 78101 79073 . + . ID=g5026.t1.exon1;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . CDS 78301 79073 . + 0 ID=cds.g5026.t1;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . exon 79199 79275 . + . ID=g5026.t1.exon2;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . CDS 79199 79275 . + 1 ID=cds.g5026.t1;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . exon 79389 79793 . + . ID=g5026.t1.exon3;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . CDS 79389 79528 . + 2 ID=cds.g5026.t1;Parent=g5026.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 79529 79793 . + . ID=g5026.t1.utr3p1;Parent=g5026.t1 #PROT g5026.t1 g5026 MMPPVVVKAEGQRPGPPADTHRVKYHCKNCRNPDPPLIEDYRAGDLICGDCGLVLGDRVLDVRSEWRTFSNDKNESSGDPSRVGGITDGIHLNTQIASGPNSRDLGRIHGKMHKEHGHDKHFLEALNEIRQMSDRIQLTLNICERAKQLYRQIFEHGALKGRKMEAVAAACIYIACRQENVPRTFKEICAVANNVPVKEIGRCYKFISQTLEIQSTMNTIKSDDYMARFCSLLRLPKNIENAAKHVAVQAGNLNLTSGKNPVSVAAAAIYMVSQVSDFPKSQKDIRDIAGVADVTIRNAYRDIYPMRSQLFPATFVVDKNRLDSLPPPT* # PASA_UPDATE: g5021.t1, single gene model update, valid-1, status:[pasa:asmbl_3232,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 48579 50521 . - . ID=g5021;Name=g5021.t1 NODE_1_length_123517_cov_42.9391 . mRNA 48579 50521 . - . ID=g5021.t1;Parent=g5021;Name=g5021.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 50319 50521 . - . ID=g5021.t1.utr5p1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 50227 50521 . - . ID=g5021.t1.exon1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 50227 50318 . - 0 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 50039 50144 . - . ID=g5021.t1.exon2;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 50039 50144 . - 1 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 49918 49948 . - . ID=g5021.t1.exon3;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 49918 49948 . - 0 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 49674 49817 . - . ID=g5021.t1.exon4;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 49674 49817 . - 2 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 49482 49588 . - . ID=g5021.t1.exon5;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 49482 49588 . - 2 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 49193 49373 . - . ID=g5021.t1.exon6;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 49193 49373 . - 0 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 48960 49054 . - . ID=g5021.t1.exon7;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 48960 49054 . - 2 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . exon 48579 48865 . - . ID=g5021.t1.exon8;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . CDS 48638 48865 . - 0 ID=cds.g5021.t1;Parent=g5021.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 48579 48637 . - . ID=g5021.t1.utr3p1;Parent=g5021.t1 #PROT g5021.t1 g5021 MDVRQYASGNSAGALSEDADAPRQITTTPSRTERSRPLVHILSGAGAGGIASIVMCPLDVVKTRLQTADPRYHGMRGTIRSIVQEEGARSLYRGLTPTLLGLLPNWAIYFVAYDEIKHHLCSSYDISDQNPLLHCVSAMSAGALCSIATNPLWVIKTRIMLNPIGPKGGYPSISSAFLRILREEGFRGFYKGVTPSLLGVVHVGIQIPLYERLKFIIQSGKDDPTMSLGAVDIIIASSLSKAFASVCWYPHEILRTRLQNQTSIPPKYRGVVHCAMVVAREEGMRAFYRGMGTNLLRVTPSGAITFTAYEMIARALTHWENSLDVAL* # ORIGINAL: g5034.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 98231 98733 . - . ID=g5034;Name=g5034.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 98231 98733 . - . ID=g5034.t1;Parent=g5034;Name=g5034.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 98602 98733 . - . ID=g5034.t1.exon1;Parent=g5034.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 98602 98733 . - 0 ID=cds.g5034.t1;Parent=g5034.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 98231 98503 . - . ID=g5034.t1.exon2;Parent=g5034.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 98231 98503 . - 0 ID=cds.g5034.t1;Parent=g5034.t1 #PROT g5034.t1 g5034 MSLASRSNVLSLYRQMIRQARLLGDAERRTTTLKEIRETFRANKDESDLLRIAELVTEAQRRVQFLAMLSPRAVRRGEQQRGRVTYVMRDGKLVEGRGDAVEGTAASNWGSGNPDPAKVTRHWALWDKQKRMGL* # PASA_UPDATE: g5024.t1, single gene model update, valid-1, status:[pasa:asmbl_3233,status:3], valid-1 # PASA_UPDATE: g5024.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3234,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 60827 62760 . - . ID=g5024;Name=g5024.t1 NODE_1_length_123517_cov_42.9391 . mRNA 60827 62760 . - . ID=g5024.t1;Parent=g5024;Name=g5024.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 62681 62760 . - . ID=g5024.t1.utr5p1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 62417 62760 . - . ID=g5024.t1.exon1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 62417 62680 . - 0 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 62024 62172 . - . ID=g5024.t1.exon2;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 62024 62172 . - 0 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 61665 61871 . - . ID=g5024.t1.exon3;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 61665 61871 . - 1 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 61421 61518 . - . ID=g5024.t1.exon4;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 61421 61518 . - 1 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 61158 61208 . - . ID=g5024.t1.exon5;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 61158 61208 . - 2 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . exon 60827 61021 . - . ID=g5024.t1.exon6;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . CDS 60834 61021 . - 2 ID=cds.g5024.t1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 60827 60833 . - . ID=g5024.t1.utr3p1;Parent=g5024.t1 NODE_1_length_123517_cov_42.9391 . mRNA 60827 62760 . - . ID=g5024.t1.1.5b6be70b;Parent=g5024;Name=g5024.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 62681 62760 . - . ID=g5024.t1.1.5b6be70b.utr5p1;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 62417 62760 . - . ID=g5024.t1.1.5b6be70b.exon1;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 62417 62680 . - 0 ID=cds.g5024.t1.1.5b6be70b;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 62024 62172 . - . ID=g5024.t1.1.5b6be70b.exon2;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 62024 62172 . - 0 ID=cds.g5024.t1.1.5b6be70b;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 61665 61871 . - . ID=g5024.t1.1.5b6be70b.exon3;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 61665 61871 . - 1 ID=cds.g5024.t1.1.5b6be70b;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 61421 61518 . - . ID=g5024.t1.1.5b6be70b.exon4;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 61421 61518 . - 1 ID=cds.g5024.t1.1.5b6be70b;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . exon 60827 61208 . - . ID=g5024.t1.1.5b6be70b.exon5;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . CDS 61150 61208 . - 2 ID=cds.g5024.t1.1.5b6be70b;Parent=g5024.t1.1.5b6be70b NODE_1_length_123517_cov_42.9391 . three_prime_UTR 60827 61149 . - . ID=g5024.t1.1.5b6be70b.utr3p1;Parent=g5024.t1.1.5b6be70b #PROT g5024.t1 g5024 MRLRGIFGGARPVRVVQGVVSPRLDVPAHIPRPVGPYQFPGTQAHPLAYDTSQEDAAVEIKNASDIAGLRHACAIARRVLDTAAAMVKPGVTTDEIDKCVHRTIVAHNAYPSPLHYRGFPKSVCTSVNDVLCHGIPDSRPLREGDIVNIDVTVYSMGFHGDLSETYGVGDVDAESQHLIVATKEALDNAIAACGPGVPFQRIAEIVSKHARSARLSVSPAFCGHGIGRFFHMAPQITHSTLSNIPGTMAEGMTFTIEPILLANHWQHRILDDGWTAVSADGGLSAQFEHTIAINKNGAEVLTARDVSARNVHRSGTPK* #PROT g5024.t1.1.5b6be70b g5024 MRLRGIFGGARPVRVVQGVVSPRLDVPAHIPRPVGPYQFPGTQAHPLAYDTSQEDAAVEIKNASDIAGLRHACAIARRVLDTAAAMVKPGVTTDEIDKCVHRTIVAHNAYPSPLHYRGFPKSVCTSVNDVLCHGIPDSRPLREGDIVNIDVTVYSMGFHGDLSETYGVGDVDAESQHLIVATKEALDNAIAACGPGVPFQRIAEIVSKHARSARLSVSPAFCGHGIGRFFHMAPQITHSTLSNIPGTMAEGMTFTIGG* # ORIGINAL: g5005.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 12477 13712 . - . ID=g5005;Name=g5005.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 12477 13712 . - . ID=g5005.t1;Parent=g5005;Name=g5005.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 12477 13712 . - . ID=g5005.t1.exon1;Parent=g5005.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 12477 13712 . - 0 ID=cds.g5005.t1;Parent=g5005.t1 #PROT g5005.t1 g5005 MNSPNFHEGSTLGESDAVVCNVSAAEWCVDERRAGMKHPREVEDVDDGLTACEQDKIRAVKDVKSGEPHCVDGAVDGAQGDGWSGRKSKRARRRELLTASPCKPWRDQTNNDVGGGAIRGLPQDKRSHKEIYARYGREYDVLVARQDTRGNIPRAMRALGCAAQGLDIIELGCGTCRLTRMIAGKVRSVCAYDVSAHMVELARGRLAAEGLSNCTVDIGDNADLSFLESASCDVVIAGWSLSYLKAENWGDALLWWRLVREAVEHIRRALRPGGRIVILETLGTGHAVPTRSGSHYYAMLLDELGFAGSWLCTDYRFESRAEAESLSKFFFGAKIAQMVQAAPLCPLNAPPFITESVVEDGSRQVHATATVRARGPIADSDGSISLPECTAIFWWNNPPDSAIGGGAVPVS* # PASA_UPDATE: g5006.t1, single gene model update, valid-1, status:[pasa:asmbl_3212,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 14009 15682 . + . ID=g5006;Name=g5006.t1 NODE_1_length_123517_cov_42.9391 . mRNA 14009 15682 . + . ID=g5006.t1;Parent=g5006;Name=g5006.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 14009 14049 . + . ID=g5006.t1.utr5p1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 14009 14150 . + . ID=g5006.t1.exon1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 14050 14150 . + 0 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 14296 14481 . + . ID=g5006.t1.exon2;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 14296 14481 . + 1 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 14606 14708 . + . ID=g5006.t1.exon3;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 14606 14708 . + 1 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 14938 15069 . + . ID=g5006.t1.exon4;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 14938 15069 . + 0 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 15252 15413 . + . ID=g5006.t1.exon5;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 15252 15413 . + 0 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . exon 15553 15682 . + . ID=g5006.t1.exon6;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . CDS 15553 15672 . + 0 ID=cds.g5006.t1;Parent=g5006.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 15673 15682 . + . ID=g5006.t1.utr3p1;Parent=g5006.t1 #PROT g5006.t1 g5006 MLPAVVKLKDGVRVGEWTIKTAKGPILTSKEMDETAARLKLPTLPEMLFGANKLVVSNQRIGFELNLNAIDALDRVDKSSYTLEVRHAKKWRSTRSTGDAEEITNVIKPFDWTFTTDYCGTIIDTTGRVKTVDTEARIDLNALRRPDPILFYDDVVLFEDELADNGMALLTARVRVMPTCFFALMRFFLRVDDVLVRIHDTRIFHEFGTASIMREYTAGERSYDELREITGAPADVAPFGEPQYFADPAVLTRCLKLTMSKFEEIKF* # ORIGINAL: g5007.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 15830 17350 . - . ID=g5007;Name=g5007.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 15830 17350 . - . ID=g5007.t1;Parent=g5007;Name=g5007.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 16274 17350 . - . ID=g5007.t1.exon1;Parent=g5007.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 16274 17350 . - 0 ID=cds.g5007.t1;Parent=g5007.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 15830 16144 . - . ID=g5007.t1.exon2;Parent=g5007.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 15830 16144 . - 0 ID=cds.g5007.t1;Parent=g5007.t1 #PROT g5007.t1 g5007 MGRHTQFDVHEAVPLSKAMIFAGAIVTLLFEVRRKHPDGRRIVDYNACLILQPLCLAGTVYGVYLNVLLPQYVIVIALTVVLALSTYKTLEKAIQQHRKGVEDERKAAALKEGCTKPLCAGNEINVDDSESEMDAGGDCEAGSGAFMMRGMDEGYRGPASNGSNPTVSSNESGHRQTDDFVRSAAADIEGEADGDGEYVGDRAALLSVGGGGSSSGVASSSRASSDGAAYRALVEREAGFPWARVGGLLFIWAVVVCSAVSKSLAGDCPHARYWVLSSAPLVVGTAFTLVFGRILRREYQFKLQAGHKFHATDFVWNMRHTVVFPLAAFVAGVAAGMVGIGGGMVIGPLLLSMSREADPTIATSISNVLVLFTSSSSTIQYVVLGRVQWDYALFFSGMTMVASLLASGVIKPWFGTPKRKALFLFLMGGIIGISGVVTLVTAILRMVHDGLGESVGLDALCAR* # PASA_UPDATE: g5035.t1, single gene model update, valid-1, status:[pasa:asmbl_3225,status:3], valid-1 NODE_1_length_123517_cov_42.9391 . gene 99281 102583 . + . ID=g5035;Name=g5035.t1 NODE_1_length_123517_cov_42.9391 . mRNA 99281 102583 . + . ID=g5035.t1;Parent=g5035;Name=g5035.t1 NODE_1_length_123517_cov_42.9391 . five_prime_UTR 99281 99370 . + . ID=g5035.t1.utr5p1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 99281 99431 . + . ID=g5035.t1.exon1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 99371 99431 . + 0 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 99739 99915 . + . ID=g5035.t1.exon2;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 99739 99915 . + 2 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 100180 100479 . + . ID=g5035.t1.exon3;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 100180 100479 . + 2 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 100767 100909 . + . ID=g5035.t1.exon4;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 100767 100909 . + 2 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 101114 101254 . + . ID=g5035.t1.exon5;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 101114 101254 . + 0 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 101389 101535 . + . ID=g5035.t1.exon6;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 101389 101535 . + 0 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . exon 101731 102583 . + . ID=g5035.t1.exon7;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . CDS 101731 102021 . + 0 ID=cds.g5035.t1;Parent=g5035.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 102022 102583 . + . ID=g5035.t1.utr3p1;Parent=g5035.t1 #PROT g5035.t1 g5035 MSQKQQKPTLTGQRIRTRKRDEKEKYDAASFRDQIIAGLVEADGDFEAASKFLDLTGNKLDFRRYVEALFDVLFAGGLLAPGGNLEEGAARSPMCIFVAKDTDGDDIRSYIELLNKLIRRYKYLQKGFEENLAKILRFLRSFSAEENARLAGATALSISSGLASATVLSSLISDHLLRDGVALKFVTQVFKVWIAKASLDNLGITLRKAGMDSRLLEFFPPNKQQTEVLEQHFKDEGLSGLVDLYRRKEVANIKGELKTALADIFGAEDFSVTDMANVVTETIQKHPISEVEAAIMLWDLLMDLVEWNKKPELIETQALKHIKQIAPVLAPYTKKFRTQVALLVRMQNYCYDNMNFVKIFSKICMLLYNADVLGEDAVLKWYTEGHSPKGKTVFLQQMKAMVDWLQSAPEESSEEEAQS* # ORIGINAL: g5020.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 47981 48545 . + . ID=g5020;Name=g5020.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 47981 48545 . + . ID=g5020.t1;Parent=g5020;Name=g5020.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 47981 47983 . + . ID=g5020.t1.exon1;Parent=g5020.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 47981 47983 . + 0 ID=cds.g5020.t1;Parent=g5020.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 48090 48545 . + . ID=g5020.t1.exon2;Parent=g5020.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 48090 48545 . + 0 ID=cds.g5020.t1;Parent=g5020.t1 #PROT g5020.t1 g5020 MAPKCTDEAIPLAACADGIYPKANGTPTRNVGADADTTRQAAARAPVRNRRRSNSARIAKAARSSIAASQVAAHQAPPQHAHAHANAQAAVIPEGTLVLGAKGHLQKRIARFFSFRWLRSTKLRTKEKGAHVYCESAPMQVRIMKNPVAEFH* # ORIGINAL: g5003.t1 original gene structure, not modified by PASA NODE_1_length_123517_cov_42.9391 AUGUSTUS gene 8928 9870 . - . ID=g5003;Name=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS mRNA 8928 9870 . - . ID=g5003.t1;Parent=g5003;Name=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 9697 9870 . - . ID=g5003.t1.exon1;Parent=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 9697 9870 . - 0 ID=cds.g5003.t1;Parent=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 9225 9302 . - . ID=g5003.t1.exon2;Parent=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 9225 9302 . - 0 ID=cds.g5003.t1;Parent=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS exon 8928 9113 . - . ID=g5003.t1.exon3;Parent=g5003.t1 NODE_1_length_123517_cov_42.9391 AUGUSTUS CDS 8928 9113 . - 0 ID=cds.g5003.t1;Parent=g5003.t1 #PROT g5003.t1 g5003 MTRARFLLRSIKRNEVFAQAKGYFGRRKNVYSVAVRAVRRTLQYKYISRKLVKRDMRSLWVQRINASARQLNITYGHFMHNLSTANVMINRKMLSELAIYEPRTFKGLADFAKARRDEGILALAEKEAARNPFVVHATTPRASPK* # PASA_UPDATE: g5025.t1, single gene model update, valid-1, status:[pasa:asmbl_3243,status:12], valid-1 NODE_1_length_123517_cov_42.9391 . gene 62914 77205 . - . ID=g5025;Name=g5025.t1 NODE_1_length_123517_cov_42.9391 . mRNA 62914 77205 . - . ID=g5025.t1;Parent=g5025;Name=g5025.t1 NODE_1_length_123517_cov_42.9391 . exon 77154 77205 . - . ID=g5025.t1.exon1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . CDS 77154 77205 . - 0 ID=cds.g5025.t1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . exon 76678 77051 . - . ID=g5025.t1.exon2;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . CDS 76678 77051 . - 2 ID=cds.g5025.t1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . exon 76328 76585 . - . ID=g5025.t1.exon3;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . CDS 76328 76585 . - 0 ID=cds.g5025.t1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . exon 75989 76205 . - . ID=g5025.t1.exon4;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . CDS 75989 76205 . - 0 ID=cds.g5025.t1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . exon 62914 75861 . - . ID=g5025.t1.exon5;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . CDS 63044 75861 . - 2 ID=cds.g5025.t1;Parent=g5025.t1 NODE_1_length_123517_cov_42.9391 . three_prime_UTR 62914 63043 . - . ID=g5025.t1.utr3p1;Parent=g5025.t1 #PROT g5025.t1 g5025 MADNEGKLAVVGENGADVQRPTTSSKGDTTPAVDAPDEARLKAVNSSTRRTSRQHLQRRGSGLGTNDAMKMQQQKAAASKEAKRARLDARHKWIIQKVAETLEIEEPAAEDFCLEGKQIDAFDDFLKQNGARKLLFYYQEAEEGNEKDLRPGTGHKTKARRLFVTNGRVEALSGTCVYFVRTTTKAITPQNMAQEINFNFIDSSGGDGILESLERTLANVLLPSLKTQDNWGDLSQNKHELLNEFLESLDKFVSILAGARANLADSVQLKRPEGIDLDTMQTPADYINAANSTETVDALEELVSHWCKQIEQVLAESEQMRKEADDIGPKAELEHWKQRMAKFNSLLDQIKSPMCKAVVGVLHAAKSRLLKAWKDLDNRITDAANEAKDNVKYLYTLEKFCEPLYKSNPVDMESSIPGLINAIRMIHSISRYYNTSERMTSLFVKITNQMITACKNYVYQDGSKIWEQERKPLIQRLNECVRLNEDYQRSFQRVKAKLQENPNERQFDFSEMYIFGKFDTFCKRIQKVVEMLNTIEKFSALANSRIEGMENILTRFNQIVITMKNKPYDILDHRKMDFDTDYEVFKRDISDLELQLQRFMDSCFDRITSTELALELLQKFESIENLNLDLEDKYMKIFLHYGKDLEVIRKIYQKNKDNPPIPRNLPPVSGCISWARQLFRRIENPMRAFQKRPSILQGVEGRKIIRNYNKLASVLMEFEMLYHRGWYKMVEAAKTGLHATLLVRHPDTEQLYVNFDPDILQLIRETKCMQRMELEIPEAARVLCVKEDRIKRNFNRLQHMLNEHKRITAKIPDIFTSLMSLYITRVAEALEPGLTMLTWTSLNLESYLDTIHRCLGQLEELTDKVNDIRECRIEALLRDMSTTCLVDIPGDEPWTVEEFLERTESLCDATAKTLDKQSSLVEKAANDLVRALTKQMTTEQKELAQNECRELLLYFNQKNLEALVKCTRLSLDTIKRRLAMPASGVERFSRSQSSKDGPLVPFFKAQIALAIPNVVMRPGLDDIQQALNKAAQTILNVSKAVYQWNQDRAAANPEAVLRNYFSEVSNNKDIVKIVMMLTSTINSTKKDITGLLDGLSKYNTVWQEDRDEKMRHFLEKQPTLSDFEGEIHRYEDIEQEVNELPAHFNIGAMELTTEPLKLALTSETKAWKQVYGQNLNLKAKQDMEEVINFVSDVSKRLSRKIKDLDDVRQTMAALSELREMEIKIEMSIAPIEEAYAMLSKFNVLVSKEETERVDTLRYNWQKLRAQASDVQDSLIRMEPGFKNDLMQSVEQFVVTVGSFGDDYQTQGPIVAGIKPKEASERLNVFQRRFEELWRKYETYSAGEELFGLTVTDYPELQRIKKELRLLQSLYTLYNAVIDGVNGYYDVLWVDINIDKINSELQEYQNKCRKLPKALKDWEAYLDLKRTIDDFCETLPLMELMANKAMQTRHWDKIAQITGHTFKIDSESFYLRNLMEAPLLKHKEDIEDVCIAAVKERDIEAKLRMVISDWSTREFTFSSFKNRGNLLLKGSDTSDIVMLMEDSLMILGSLMSNRYNAPFKPEIQQWVQKLTLATEIIENWLHVQNLWIYLEAVFVGGDIAKQLPKEAKRFSNIDKSWVKIMTRANENPNVIQCCVGDETLGNLLPHLAEQLEVCQKSLSGYLEKKRAVFPRFYFVSDPALLEILGQASDSHSIQNHLLSVFDNVKKVTFHEKEYDRILSMSSRENETVDFTVPMIAVGNVEIWLGTLLKAMQTAINDIARDAAIATGEPSFSLEGFLNRYPAQVGLLGLQMIWTRDSEEALTLARTDKKIMQTTNQRFLDMLNLLIDTTTRDLTPMDRTKFETLITIHVHQRDIFDNLVKLHVKAPNDFEWLKQTRFYWREDLDTTVVSITDVDFKYQNEFLGCTDRLVITPLTDRCYITLAQALGMCMGGAPAGPAGTGKTETVKDMGRSLGKFVVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIELPVLSVAAQQIACVLTGKKERRADFTFTDGDTVEMNPEFGIFLTMNPGYAGRQELPENLKVQFRSVAMMVPDRQIIIRVKLASCGFQSNVILARKFFVLYRLCEEQLSKQRHYDFGLRNILSVLRTLGPVKRANPEESENTIMMRVLRDMNMSKLVDEDEPLFLSLINDLFPGLTIQKASYPELEVAIEHQVKEAGLIAHPPWFLKVIQLYETQRVRHGIMVLGPPGAGKTRCIHTLMKAMTEVGDSHKEYRMNPKSITAPQMFGRLDVATNDWTDGIFSALWRKTLKMKKSEHIWIVLDGPVDAIWIENLNSVLDDNKTLTLANGDRISMAPNCKLVFEVHSLANASPATVSRNGMIYMSSSALDWKPILQAWVDTRKGGEGEKLKGQFEVIFDQAYTFVMQSTKMKMEVLQVNIIQQALDLLSGLLSDGENYSDAFLEKTFVFALIWSLGALLEIDDRKKLEEFLKKKEGQLALPSLTDAADSIFDYVVAPNGEWEHWSRRLPAYAYPTDFKPEYYSIVVPTVDNVRTDFLIQTVAKQHKHVLLIGEQGTAKTVMVKGYMNRYDPESHVTKSMNFSSATTPLIYQRTIESYVDKRMGNTYGPPAGKKMTVFIDDVNMPEINEWGDQVTNEIVRQLIEQRGLYSLEKPGDFTNIVDLQFICAMIHPGGGRNDIPARLKRHFSIFNCTLPSNASMDKIFGTLAAYFCPERQFEKSVVELANKLVPLTRRLWQATKVKMLPTPAKFHYIFNLRDLSRIWEGMLKVESSVISSVDQVVHLWRHECSRVIADRFTEVKDLEWFEKTMVRFVQEEYGDELAHTCKAEQYFVDFLRDAPEPTGEEGDDHVIETPKVYEPIPSFEVLSERLQQFMAEYNEAIRGAHMDLVFFKDAMIHLVKISRVIRTPRGNALLVGVGGSGKQSLTRLASFIAGYEAFQITLTRSYNVQNLMDDLKHLYKTTGVNGKGAAFIFTDSEIKDEAFLEYMNNVLTSGEVSSLFARDEIDEICNDLRPIMKREFPRLPDTLENLYDYFISRVKNNLHVVLCFSPVGEKFRNRALKFPGLISGCTMDWFQRWPKEALVAVADYFLRSFDMVCTDEVKQSVVEQMGSVHDGVAEICTEYFNRFRRQAHVTPKSYLSFINSYKTVYAEKKTYIGNLADRMKMGLSKLIEASKSVAELAKELAVKEKELAVAAKKADEVLAEVTVQAQAAEKVKEAVQKKKEKAEIIVNAINADKEIAEKKLIAAKPALQEAERALDTIQPAHIATVRKLAKPPHLIMRIMDCVLLLRSLRLDTVTPDPDRPSIRPSWSESLKVMSKSDFLSSLQNFPKDSINEETIELLEPYMEAEDFNFDSAKKVCGDVAGLCSWSRAMVTFYSVNKEVLPLKANLAVQQHKLELAMSDLATAQAELDEKQRELDIVKAKYNAAVKEKSDLQDDADTCRRKMQAATALINGLGGEKERWTLQSKLFADQIGRLVGDVMLATAFLSYSGPFNQDFRSALLNKWQRELQRRKVPFSDDLNIISMLVDNATIGEWTLQGLPNDELSIQNGIIVTKATRYPLLIDPQGQGKKWIINRETPNQLQLSSLNNKYFRNHLEDCLSCGKPLLLEDIDEELDPVLDNVLERNFIKSGRTVKVKVGDKEVDVMDGFVLYITTKLSNPRYTPEISAKTAIIDFTVTIKGLEDQLLGRVILKEKNELETERTKLLEDVTANKKKMKELEDNLLLRLTSTKGSLVDDESLIDVLAVTKRTAEEVNDKLMVAAETELKINTAREEYRPVATRGSILYFLIVEMSMVNVMYQTSLQQFLGLFDESMTRSETSPIPNKRIQNIIDYLTFRVFQYTCRGLYEIHKFLFTLLLALKTDIQSGRVTSEEFQVFIKGGAALDMNTVQKKPCAWITDMTWLNIVELSKLPQFGEILNQVSRNEKGWKNWYDKDAPEEAQLPDGYQNTLDSFRRTLLVRSWCPDRTVNQSRKYIGDTLGKRFAEGVILDLERIWDESDQRTPMICLLSMGGDPTSAIEALSKKQKQETRAISMGQGQEVHARRLMQQFMQTGGWVLLQNCHLGLNFMDELLDTITTTETINENFRLWITTEEHPKFPIGLLQSGIKFTNEPPQGVKAGLKRTYNWVSQDMLDVNNLAMWKPMLYTVAFLHTTVQERRKFGPLGWNIPYEFNQADLLASVQFVQNHLDEVDPRKGISWNTVRYMIGEVQYGGRVTDDFDQRLLNTYTKTWFGDHMFADNFCFYKGYVIPVKKTIDEYRKFIEELPLIDSPEVFGLHPNADITYQTNMANSVLGTIVNIQPKESGGGGGETREAAVERLADDMLEKLPADYIRYEVKGALERQGGQTPMNIFLGQEIDRIQRVISVVRRTLKDLKLAIAGTIIMSDELRNALDSMYDARVPAAWQSVSWQSATLGFWFSDLVQRNAQFSSWLFEGRPHVFWMTGFFNPQGFLTAMRQEITRAHKGWALDSVQVHTEVLRQMKEDITSPPQEGVYIHGLFLEGAGWDRRSSRLVEPTPKVLYSTLPIIHVSAVNSTGAKDPRLYECPVYKKPRRTDQEYIFNVDLKSSQNPDHWILRGVALLCDTK* # PASA_UPDATE: g4333.t1, single gene model update, valid-1, status:[pasa:asmbl_6521,status:12],[pasa:asmbl_6522,status:12], valid-1 NODE_3772_length_2789_cov_48.444 . gene 1 1736 . - . ID=g4333;Name=g4333.t1 NODE_3772_length_2789_cov_48.444 . mRNA 1 1736 . - . ID=g4333.t1;Parent=g4333;Name=g4333.t1 NODE_3772_length_2789_cov_48.444 . five_prime_UTR 1521 1736 . - . ID=g4333.t1.utr5p1;Parent=g4333.t1 NODE_3772_length_2789_cov_48.444 . five_prime_UTR 1361 1391 . - . ID=g4333.t1.utr5p2;Parent=g4333.t1 NODE_3772_length_2789_cov_48.444 . exon 1521 1736 . - . ID=g4333.t1.exon1;Parent=g4333.t1 NODE_3772_length_2789_cov_48.444 . exon 1 1391 . - . ID=g4333.t1.exon2;Parent=g4333.t1 NODE_3772_length_2789_cov_48.444 . CDS 1 1360 . - 0 ID=cds.g4333.t1;Parent=g4333.t1;3_prime_partial=true #PROT g4333.t1 g4333 MASVVSFSSLPLEIVVHHIAPFLGNVELSSLSKVNSSLHTHLRHVRLFHLWPMYNRKYIEDSQFRDEVRATIPVDRLVLVSFDGDLQDLSAFKGVHSALFPKEGRTGSTCSAPDLSPLKGVHTVELSFTSKLPDFLAPLADAQVVCLRGVYSRLKVPAFRKAKSVDICNGRLDLNDLTGISRVRLVGGYTIEGALIQDISPLRLARFVELRDVEKLEDLSCLENAREVVIHDCPRIVTLPPATYLRAFTWHRSPLTAIPPELGGLRFLDLSSSRDLEDVSAAGNVHELILHHCFSLKDVSALGSVHTLRISRIIAVLDVSALSKVHTLEFDDVDLVGVAKLTGVHYLSLSSVRFDVQEISQLGTVHTLSLPLVDIEDVSTLGGVHTLLFERNERIMDVSALGNCHRVELIGCPVSDVSVLGRVHTLNLQSTNVSDVSMLGNVHTLNLRSCKKV # ORIGINAL: g9085.t1 original gene structure, not modified by PASA NODE_5014_length_1078_cov_37.6431 AUGUSTUS gene 250 794 . - . ID=g9085;Name=g9085.t1 NODE_5014_length_1078_cov_37.6431 AUGUSTUS mRNA 250 794 . - . ID=g9085.t1;Parent=g9085;Name=g9085.t1 NODE_5014_length_1078_cov_37.6431 AUGUSTUS exon 653 794 . - . ID=g9085.t1.exon1;Parent=g9085.t1 NODE_5014_length_1078_cov_37.6431 AUGUSTUS CDS 653 794 . - 0 ID=cds.g9085.t1;Parent=g9085.t1 NODE_5014_length_1078_cov_37.6431 AUGUSTUS exon 250 362 . - . ID=g9085.t1.exon2;Parent=g9085.t1 NODE_5014_length_1078_cov_37.6431 AUGUSTUS CDS 250 362 . - 2 ID=cds.g9085.t1;Parent=g9085.t1 #PROT g9085.t1 g9085 MYIRRFSLTELPRYLVIYIKRFTKNNFYLEKNPTIVNFPVRNLDLREHVGADYKGNTRYDLLANIFHDGQPDPGKGTYRVHILHK # ORIGINAL: g13489.t1 original gene structure, not modified by PASA NODE_1968_length_8296_cov_36.0802 AUGUSTUS gene 7027 7985 . - . ID=g13489;Name=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS mRNA 7027 7985 . - . ID=g13489.t1;Parent=g13489;Name=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 7882 7985 . - . ID=g13489.t1.exon1;Parent=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 7882 7985 . - 0 ID=cds.g13489.t1;Parent=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 7455 7498 . - . ID=g13489.t1.exon2;Parent=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 7455 7498 . - 1 ID=cds.g13489.t1;Parent=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 7027 7238 . - . ID=g13489.t1.exon3;Parent=g13489.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 7027 7238 . - 2 ID=cds.g13489.t1;Parent=g13489.t1 #PROT g13489.t1 g13489 MASRVILLNLAEGGFGPNPWAAATVPTTATTTTAAHAQMAPPGLHYGASGVAPWYQGHDGLRPLQYGAHPTQLSQWGFPTPLHHPESGYPGGYQSVFQGSHPGYPAPTHVTRNPFVGQG* # PASA_UPDATE: g13487.t1, single gene model update, valid-1, status:[pasa:asmbl_3132,status:12], valid-1 NODE_1968_length_8296_cov_36.0802 . gene 186 1251 . + . ID=g13487;Name=g13487.t1 NODE_1968_length_8296_cov_36.0802 . mRNA 186 1251 . + . ID=g13487.t1;Parent=g13487;Name=g13487.t1 NODE_1968_length_8296_cov_36.0802 . five_prime_UTR 186 186 . + . ID=g13487.t1.utr5p1;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . exon 186 303 . + . ID=g13487.t1.exon1;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . CDS 187 303 . + 0 ID=cds.g13487.t1;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . exon 552 691 . + . ID=g13487.t1.exon2;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . CDS 552 691 . + 0 ID=cds.g13487.t1;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . exon 912 1251 . + . ID=g13487.t1.exon3;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . CDS 912 1110 . + 1 ID=cds.g13487.t1;Parent=g13487.t1 NODE_1968_length_8296_cov_36.0802 . three_prime_UTR 1111 1251 . + . ID=g13487.t1.utr3p1;Parent=g13487.t1 #PROT g13487.t1 g13487 MYTAIMYFVLSPLGSFSGYYGAIWVYIFCVFGLAYFCSMLLSKEVMSVTTVVIALIYAITSGSGPTYNSAVKNHIAWFFDISYVFRCGNAMWWNEVSEYSNVYDIEYLNTEYFGYQINRYSYELGVAFILGLVWRVLAFLAMVTRDQVKQR* # ORIGINAL: g13488.t1 original gene structure, not modified by PASA NODE_1968_length_8296_cov_36.0802 AUGUSTUS gene 3226 5843 . + . ID=g13488;Name=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS mRNA 3226 5843 . + . ID=g13488.t1;Parent=g13488;Name=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 3226 3606 . + . ID=g13488.t1.exon1;Parent=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 3226 3606 . + 0 ID=cds.g13488.t1;Parent=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 3799 3879 . + . ID=g13488.t1.exon2;Parent=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 3799 3879 . + 0 ID=cds.g13488.t1;Parent=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS exon 4050 5843 . + . ID=g13488.t1.exon3;Parent=g13488.t1 NODE_1968_length_8296_cov_36.0802 AUGUSTUS CDS 4050 5843 . + 0 ID=cds.g13488.t1;Parent=g13488.t1 #PROT g13488.t1 g13488 MTVPVEPLTHNGQITIGVCLALFLVLLTNKFATDLVFFFMLMILVFTRVITEDEAVKGFSNTSLLTVAALFIVAQGLDSTGAIQLVTKKLWRTDLSLHHALLRLMFPLAALSSFFNNTPLVAMFMPEVIAWARRLKMSPSRLLMPMAHAIVLGGQITIMGTSTSILVNGLLEAAKKPKFALLSVAPLGLTITAVGLIIIAVLAKWLLPDRGTDERTFSDPKQYTAEFHVDEKGPLASGRRLRDISIPTIAGEKVAKVLPIEIIRDGQVIPAPTESEIVRGGDRLVFGGALAHILPLQHIEGLRLASDGEFATGGSPAAKFTAYTHPSQILNRLRYTYHRGVTSIRALIRKTTAVNPEDYANEIAIDVSGDKGGEDVGQVEVVAALTDSPSAAAGVSGGDGHVVDDHVAGADKDDASAVQPTIPDALTVDAVADVKSVSGSDITAPPSYSEEEPPVFTAGETRNLFEVVISHKSPLIGQRVGNGTFRKTYDAAVVAVARKGVLLKSTNLNDWIIEAGDFILVDGRPSFRDRHARSDDFYIVTLQQTEAARTPIPGRWRAIFALACLITMIVVAAVEKTTMFMASYTCAITFIVTGIVPVTDARKSFDLNVLITIAGSLGLSQALQTSGAAKTIATALVHATGNNSPWGALVGIYLSGLIVTEFVTNNAAASLVFPIAMAVAKALDVSYKPFALAVMFSASLGFAFPWGYQCKLMVYAPGRYKLADFLKMGIILDVAIGAVCIALIPLFHPFK* # ORIGINAL: g13961.t1 original gene structure, not modified by PASA NODE_4663_length_1356_cov_29.0101 AUGUSTUS gene 341 1277 . - . ID=g13961;Name=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS mRNA 341 1277 . - . ID=g13961.t1;Parent=g13961;Name=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS exon 1155 1277 . - . ID=g13961.t1.exon1;Parent=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS CDS 1155 1277 . - 0 ID=cds.g13961.t1;Parent=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS exon 846 986 . - . ID=g13961.t1.exon2;Parent=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS CDS 846 986 . - 0 ID=cds.g13961.t1;Parent=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS exon 341 565 . - . ID=g13961.t1.exon3;Parent=g13961.t1 NODE_4663_length_1356_cov_29.0101 AUGUSTUS CDS 341 565 . - 0 ID=cds.g13961.t1;Parent=g13961.t1 #PROT g13961.t1 g13961 MLRMVPFLVFVIVPFMEFLLPVFLKLFPNMLPSTFQDHLKEEEKLKKLLKVKIEMARFLQKTIEEMAVTSNAASGPQTVADFTQFMHKIRETGTWPSTDEIVKYSKLFENELTLDSLTRPQLVALCKTLMIPAIGTSQILRFQLRMKLRQLRADDLVRVTLF* # ORIGINAL: g9765.t1 original gene structure, not modified by PASA NODE_3451_length_3436_cov_35.7608 AUGUSTUS gene 2327 3292 . - . ID=g9765;Name=g9765.t1 NODE_3451_length_3436_cov_35.7608 AUGUSTUS mRNA 2327 3292 . - . ID=g9765.t1;Parent=g9765;Name=g9765.t1 NODE_3451_length_3436_cov_35.7608 AUGUSTUS exon 3120 3292 . - . ID=g9765.t1.exon1;Parent=g9765.t1 NODE_3451_length_3436_cov_35.7608 AUGUSTUS CDS 3120 3292 . - 2 ID=cds.g9765.t1;Parent=g9765.t1 NODE_3451_length_3436_cov_35.7608 AUGUSTUS exon 2327 2845 . - . ID=g9765.t1.exon2;Parent=g9765.t1 NODE_3451_length_3436_cov_35.7608 AUGUSTUS CDS 2327 2845 . - 0 ID=cds.g9765.t1;Parent=g9765.t1 #PROT g9765.t1 g9765 NVEARVRTGDYYYYGYGTDVDYLGAARHYRTAAEQQQNAQAMFNLAYMHESGIGLKQDFHLAKRYYDMASEASAEAVLPVRLALAKLTLHQFWSVSLDDVEQYVDVLDSLENHLIGLLGVVLGALMYYRLRISARMRRQRVVAPPVPASVAAGQSQRSPAVSSAATSTATTGATASASSSADTSTAGWVAGDVAGAASEVGGQGEGEGGSDGLRRRRTTEEDAPANEDR* # PASA_UPDATE: g9764.t1, single gene model update, valid-1, status:[pasa:asmbl_6082,status:12], valid-1 NODE_3451_length_3436_cov_35.7608 . gene 187 2001 . - . ID=g9764;Name=g9764.t1 NODE_3451_length_3436_cov_35.7608 . mRNA 187 2001 . - . ID=g9764.t1;Parent=g9764;Name=g9764.t1 NODE_3451_length_3436_cov_35.7608 . five_prime_UTR 1930 2001 . - . ID=g9764.t1.utr5p1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . exon 1892 2001 . - . ID=g9764.t1.exon1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . CDS 1892 1929 . - 0 ID=cds.g9764.t1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . exon 1564 1621 . - . ID=g9764.t1.exon2;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . CDS 1564 1621 . - 1 ID=cds.g9764.t1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . exon 977 1421 . - . ID=g9764.t1.exon3;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . CDS 977 1421 . - 0 ID=cds.g9764.t1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . exon 647 767 . - . ID=g9764.t1.exon4;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . CDS 647 767 . - 2 ID=cds.g9764.t1;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . exon 187 421 . - . ID=g9764.t1.exon5;Parent=g9764.t1 NODE_3451_length_3436_cov_35.7608 . CDS 187 421 . - 1 ID=cds.g9764.t1;Parent=g9764.t1 #PROT g9764.t1 g9764 MSGFLGAFLRRVSGFGAAGHVEPEEEEQQSAQLSPEFPKHESKRGNLQQAHTDAVATSDGNATAVNGSRKRKRTDPKKIVSKSATASATTAAASSSPVKAAKEEGTSLAPEKKRKLSKDEKKEKKETKATKEKTTTKATKEKKDATVLRSKPAKRPLMGKKDEVQSKVLHGDIEVIVGRSYFVKLEGSGEAGIVLVDAIRGNQVEGRWLYRQSDIPKSVKRPDIVSKNEIFDSNNVCTIDLDTIEDESGVSVSVADFINHGKEGYLLRPHVIYYDCMKKRFVMRRNPNGSYDRVNPDN* # ORIGINAL: g12203.t1 original gene structure, not modified by PASA NODE_3599_length_3134_cov_37.0154 AUGUSTUS gene 674 3063 . + . ID=g12203;Name=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS mRNA 674 3063 . + . ID=g12203.t1;Parent=g12203;Name=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 674 977 . + . ID=g12203.t1.exon1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 674 977 . + 0 ID=cds.g12203.t1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 1221 1359 . + . ID=g12203.t1.exon2;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 1221 1359 . + 2 ID=cds.g12203.t1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 1598 1742 . + . ID=g12203.t1.exon3;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 1598 1742 . + 1 ID=cds.g12203.t1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 2098 2266 . + . ID=g12203.t1.exon4;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 2098 2266 . + 0 ID=cds.g12203.t1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 2500 2591 . + . ID=g12203.t1.exon5;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 2500 2591 . + 2 ID=cds.g12203.t1;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS exon 2947 3063 . + . ID=g12203.t1.exon6;Parent=g12203.t1 NODE_3599_length_3134_cov_37.0154 AUGUSTUS CDS 2947 3063 . + 0 ID=cds.g12203.t1;Parent=g12203.t1 #PROT g12203.t1 g12203 MATVCRRHSCGSHGHCNGSHPPLPDGHAKTVVLLAGSTGNFGRFLAHALLEHNDRYDVRVLCRDNMLDDKKDIVASFEALGAKVITCADMENIDQLAVSMTGSEIVISTIGGSGHVVRQLSLIEACKIAGVRKFVPSEYGIDFDAIQGPLMPIFEGKKVVHDALKESGLDYTFYVAGFFMDTIFSEFFGLNFGSGKATIPGDGNTLCTFTLREDIAEFVAETVDDPRSSRATLRLSGDELTLHEAARVFGKWGETSKISYISLDELLADIELDSNPYANVPSQLLYTLGSGNALIGKPNNNEDFKFRPRPLLSWLSHLAQS* # PASA_UPDATE: g1087.t1, single gene model update, valid-1, status:[pasa:asmbl_7116,status:12], valid-1 NODE_4220_length_2001_cov_32.5467 . gene 335 1910 . + . ID=g1087;Name=g1087.t1 NODE_4220_length_2001_cov_32.5467 . mRNA 335 1910 . + . ID=g1087.t1;Parent=g1087;Name=g1087.t1 NODE_4220_length_2001_cov_32.5467 . exon 335 485 . + . ID=g1087.t1.exon1;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . CDS 335 485 . + 0 ID=cds.g1087.t1;Parent=g1087.t1;5_prime_partial=true NODE_4220_length_2001_cov_32.5467 . exon 781 922 . + . ID=g1087.t1.exon2;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . CDS 781 922 . + 2 ID=cds.g1087.t1;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . exon 1211 1302 . + . ID=g1087.t1.exon3;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . CDS 1211 1302 . + 1 ID=cds.g1087.t1;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . exon 1429 1505 . + . ID=g1087.t1.exon4;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . CDS 1429 1505 . + 2 ID=cds.g1087.t1;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . exon 1763 1910 . + . ID=g1087.t1.exon5;Parent=g1087.t1 NODE_4220_length_2001_cov_32.5467 . CDS 1763 1910 . + 0 ID=cds.g1087.t1;Parent=g1087.t1;3_prime_partial=true #PROT g1087.t1 g1087 EKELGAGAAPAPGVPAGEKKKSPREMFNRRGLEDIVKRRFIYNASFDIYGGVAGLYDYGPTGCAIKANLLAMWRSHFVLEEQMLEVDCVMLTPEPVLRASGHVERFTDFMVRDAVDKVKCFRADHLLEEVIEKKIEDAATTEAERQELKLVLAQIDNFKAPELSHYFKKYAVRAPETNNEITEPEEFNLMFPTSIGPSGYIKG # ORIGINAL: g2904.t1 original gene structure, not modified by PASA NODE_14248_length_251_cov_354.284_potentialcontaminant AUGUSTUS gene 21 122 . - . ID=g2904;Name=g2904.t1 NODE_14248_length_251_cov_354.284_potentialcontaminant AUGUSTUS mRNA 21 122 . - . ID=g2904.t1;Parent=g2904;Name=g2904.t1 NODE_14248_length_251_cov_354.284_potentialcontaminant AUGUSTUS exon 21 122 . - . ID=g2904.t1.exon1;Parent=g2904.t1 NODE_14248_length_251_cov_354.284_potentialcontaminant AUGUSTUS CDS 21 122 . - 0 ID=cds.g2904.t1;Parent=g2904.t1 #PROT g2904.t1 g2904 MLAVQKRLCPKFDSAPIPLLPETFLEILQHAARM # ORIGINAL: g7628.t1 original gene structure, not modified by PASA NODE_1735_length_9470_cov_41.2418 AUGUSTUS gene 4163 9247 . - . ID=g7628;Name=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS mRNA 4163 9247 . - . ID=g7628.t1;Parent=g7628;Name=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 9215 9247 . - . ID=g7628.t1.exon1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 9215 9247 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 8572 9071 . - . ID=g7628.t1.exon2;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 8572 9071 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 8274 8388 . - . ID=g7628.t1.exon3;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 8274 8388 . - 1 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 7832 8044 . - . ID=g7628.t1.exon4;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 7832 8044 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 7506 7629 . - . ID=g7628.t1.exon5;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 7506 7629 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 7110 7266 . - . ID=g7628.t1.exon6;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 7110 7266 . - 2 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 6840 6990 . - . ID=g7628.t1.exon7;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 6840 6990 . - 1 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 6456 6511 . - . ID=g7628.t1.exon8;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 6456 6511 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 5917 6046 . - . ID=g7628.t1.exon9;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 5917 6046 . - 1 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 5596 5717 . - . ID=g7628.t1.exon10;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 5596 5717 . - 0 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 5260 5429 . - . ID=g7628.t1.exon11;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 5260 5429 . - 1 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 4895 5063 . - . ID=g7628.t1.exon12;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 4895 5063 . - 2 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 4557 4720 . - . ID=g7628.t1.exon13;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 4557 4720 . - 1 ID=cds.g7628.t1;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 4163 4443 . - . ID=g7628.t1.exon14;Parent=g7628.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 4163 4443 . - 2 ID=cds.g7628.t1;Parent=g7628.t1 #PROT g7628.t1 g7628 MPKDEYEEDFEEYQEDFEEFEDNDESEGESNAPNYGRAKTNADRGRHRDGSDDDDARTDEPEDEPDEDEEASRIAEDPVALKAAMNRNRDLIEVMRATDAENARVLQSPLVAKIRGASPGSGRTSGGGRDRDASEEVDDDGDEGTKPRRRFLDFSKAKDNAKVERDVVAAQTRGVRGREILRLIDLDFTTFNLFELSPVSEYELYIKSFGKKDSTQASTQTRDDDNDQDTQTEPVTMRDRWVQNPPEDLDGWGGTEDDTYQRHIDKYERLAKMDASRLSDFLKRAGQVVETIMEENTVDQTPQTKTFKSTIPLSVDYLQLSSSISFLAGRPVIDAQFSPTQPQLLLTSFGAYPNPLRTSDVNRDLGFVTLWNLNEPSRPQKILVCESVPTRVCFSPVKASMAFAGTVDGSVVAWDLREPSTMHKTHTIGGVDYVFRSPTYSTDGITDHKGPIAAITAILNGSGGRGEAAMSVSSSPTAFQIASLGEDGVLNIWVVLEVDKTDPNGSEVDLGLRPGGKIKLVRSSSVTVMHPSPRRDILFTDIRGLSLAFFPEDPNHYVVGSDIGVAIHGVRVGGKATPKYWSSSAPSFATGFAVDPFAMGSDVTDVDFSPFDASLFLLGHSSGRLSLHTTTTSDPIAVWEMGNVSVRLIRWSRSRPCVFFVLDDSSRLAAFDLLEDEFAPIMEENFGDKKKRVQKSNSNSKRRSSRASDSEDDDDRSSQVPVVSHPVASFALSCDPSSWEASADVAIPGQRRSPEIVIAFESGVVEVHRLCGKLLEIKRDEAAKLAAFANCSHV* # ORIGINAL: g7627.t1 original gene structure, not modified by PASA NODE_1735_length_9470_cov_41.2418 AUGUSTUS gene 1102 3661 . - . ID=g7627;Name=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS mRNA 1102 3661 . - . ID=g7627.t1;Parent=g7627;Name=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 3346 3661 . - . ID=g7627.t1.exon1;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 3346 3661 . - 0 ID=cds.g7627.t1;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 2982 3242 . - . ID=g7627.t1.exon2;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 2982 3242 . - 2 ID=cds.g7627.t1;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 1911 2794 . - . ID=g7627.t1.exon3;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 1911 2794 . - 2 ID=cds.g7627.t1;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 1512 1703 . - . ID=g7627.t1.exon4;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 1512 1703 . - 0 ID=cds.g7627.t1;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS exon 1102 1233 . - . ID=g7627.t1.exon5;Parent=g7627.t1 NODE_1735_length_9470_cov_41.2418 AUGUSTUS CDS 1102 1233 . - 0 ID=cds.g7627.t1;Parent=g7627.t1 #PROT g7627.t1 g7627 MPAETIKETNATDRIAALKQQQAHTDDSQDAPVAMETDSAAPAPVPVKITEDGGITKLVKKTGQAGVTPMAGDKVFVHYVGKLLDGTVFDSSRERGTEFSFTLGMGEVIKGWDQGVATMERGELAVLTCQSDYAYGKGGSPPKIPGDATLEFEVELIRFESGEDITKDGGVIKKSIVKGSGWKSPKKGEVVFVNYVGRLADTDEIFDKTDGNREFALEAPVDGLPTQLHKVIASMKKGEKARVAIQSRYVHDHKYISPNGVPAGADVVYELELIAWDEVAELSKDAKVIKRTRVEGKGYDKPRDGSSVTLRLRGKVAGTEQWVDNRWDGDGVSFVVGETENAVPEGVEMAVEAMKEGERATLSVGSAYVFGGAGDASRGLPPSTDAEYELELVSFTKAKETWEMNPEEKLVAAERAKQLGTNAFKNNSLRFARKRYDRGLKILESDHDFSDAQKKAAIPVRLSLHLNMATTDLKLGDYKEVIAQSTKALAIDANNVKALFRKGQAHNKLNELEQARDVLLHAAKLDPKLKDVRVELEDVKKRIAEQNQKDKQLYAGMFNNKTAKKRKTEDAGEPSEGTGSDDSKPEPMQIDASL* # ORIGINAL: g8671.t1 original gene structure, not modified by PASA NODE_9475_length_331_cov_47.3828 AUGUSTUS gene 2 331 . + . ID=g8671;Name=g8671.t1 NODE_9475_length_331_cov_47.3828 AUGUSTUS mRNA 2 331 . + . ID=g8671.t1;Parent=g8671;Name=g8671.t1 NODE_9475_length_331_cov_47.3828 AUGUSTUS exon 2 331 . + . ID=g8671.t1.exon1;Parent=g8671.t1 NODE_9475_length_331_cov_47.3828 AUGUSTUS CDS 2 331 . + 0 ID=cds.g8671.t1;Parent=g8671.t1 #PROT g8671.t1 g8671 FFRELYPNAARAAAWLMDTAASGAGLPPYLTCTYDLLNLQMSKYATYNAHLHITSMLACVEVAELAGDEPLRSACASAVDTGKAALVEFLWLSAGNGTGHFRVHDTSPNI # PASA_UPDATE: g14293.t1, single gene model update, valid-1, status:[pasa:asmbl_3129,status:12], valid-1 NODE_1965_length_8311_cov_40.6918 . gene 6579 8218 . - . ID=g14293;Name=g14293.t1 NODE_1965_length_8311_cov_40.6918 . mRNA 6579 8218 . - . ID=g14293.t1;Parent=g14293;Name=g14293.t1 NODE_1965_length_8311_cov_40.6918 . exon 7919 8218 . - . ID=g14293.t1.exon1;Parent=g14293.t1 NODE_1965_length_8311_cov_40.6918 . CDS 7919 8218 . - 0 ID=cds.g14293.t1;Parent=g14293.t1 NODE_1965_length_8311_cov_40.6918 . exon 6579 7598 . - . ID=g14293.t1.exon2;Parent=g14293.t1 NODE_1965_length_8311_cov_40.6918 . CDS 6948 7598 . - 0 ID=cds.g14293.t1;Parent=g14293.t1 NODE_1965_length_8311_cov_40.6918 . three_prime_UTR 6579 6947 . - . ID=g14293.t1.utr3p1;Parent=g14293.t1 #PROT g14293.t1 g14293 MQSAIASRKPSPVTTANASAMLGQTALCERIRDEFWARHKAFGHVFECNASMWRTAGLPVDDTLLLGGLALVVEAATQHASLGAIEAVQAADRREIWVNNMKARLMESLSLLEQCAKYAQSFPDDGDEASRVNACARTCTVRYVQLCNEQFDTTVRRRGRREVSDHFEGMLKAIAALRSIASHSTRSRRKWRLAAEAAAVSTPPRHIGKDSQHAGVSRGNDDDGRSPGRHGDSLVGAMYSASRRLLEHVVRVAAPRAECMESAVEAADEGRELVLWLMFACKFVNKAMEVVGNEDARMLQLLAGLQTLEQALPNAF* # ORIGINAL: g14291.t1 original gene structure, not modified by PASA NODE_1965_length_8311_cov_40.6918 AUGUSTUS gene 170 3027 . - . ID=g14291;Name=g14291.t1 NODE_1965_length_8311_cov_40.6918 AUGUSTUS mRNA 170 3027 . - . ID=g14291.t1;Parent=g14291;Name=g14291.t1 NODE_1965_length_8311_cov_40.6918 AUGUSTUS exon 170 3027 . - . ID=g14291.t1.exon1;Parent=g14291.t1 NODE_1965_length_8311_cov_40.6918 AUGUSTUS CDS 170 3027 . - 0 ID=cds.g14291.t1;Parent=g14291.t1 #PROT g14291.t1 g14291 MADRYSASTTTTTPLVLITLNGTTTAHLEAAISLASSAWASGLLGVIEITTRVTLNAVVTFPATAAMIIRGRDDESVIACSYNAPTGTRRLTVDRSPFLVVPSGGRVAFSSVTVSGCTLSVRTGALVSLVNVSMLLGRWSGVSLRMTPDDAKGGCLRISSGNVLVENSAFSGCTAGRGGTVYLDGSATLGAVGLEITDSSSVREGGAVYIADDAAVALEQMSALQVTCGSGLGGGFLFLADFSIASIMSSSVSDMTSKASGGGFATISDVASLYVLDSHITSCTALTKDADLPEEVNPMSEGGCFRVTYASTLVLRGTEVSGCTSPKKGGCAYLSQWGDLTIDGSWLSNGTAAENGGLVYMRDSSKLHIVDTDLINFVADDSGGAIYMAQGAVVLCERITVRQVSSGSAGGFVSMVADETLNHEPLQLVLHDSIVEDARAVSSGGVVSAQGDGVPSLEIVGCTFVRAHGYSGSVLVTFDSVVATINDTIAINCSGFWEGTYAAVDRSRITLTNVDVKSPRSFSGSAFHASDSARLDASDVRVIDSVTDWGVFKVSGQAVMLISDASVLQSVGSSAAVLFIGQSGSFFAERMLVDDASSPSGDVIASNSDGRTYIVNCVFRNITAIPILITMSSYMRVVDTVFEGHNIPQYPGLAYVIDSSHLVMERVNASNIQTPRNGPGAFMLSNSALVELENCSFADITAYSSGGIAVVQGTSTFRASRIAVQRIRSLRGDGGAFAVSVVGTIHVSNSNFTEISAGRQGGLVLIQDAADVTFDGVVATSLRASDRSTGGGFASVRGSDRIVDNVYGPKLTVRNSVIRDVIAANDGACIYLESDTVLTIADSLFDGCQIDEKKARFGSGGFLFAASSARNWTLERVAVTGARARFGPVVSTLRPVPESVRRFAFSHLSDNGANNVTAEGFSTVVAALVVEPSTVTVEPGTRWPVIKVGVGV # PASA_UPDATE: g14292.t1, single gene model update, valid-1, status:[pasa:asmbl_3128,status:12], valid-1 NODE_1965_length_8311_cov_40.6918 . gene 4257 6379 . + . ID=g14292;Name=g14292.t1 NODE_1965_length_8311_cov_40.6918 . mRNA 4257 6379 . + . ID=g14292.t1;Parent=g14292;Name=g14292.t1 NODE_1965_length_8311_cov_40.6918 . five_prime_UTR 4257 4322 . + . ID=g14292.t1.utr5p1;Parent=g14292.t1 NODE_1965_length_8311_cov_40.6918 . exon 4257 5267 . + . ID=g14292.t1.exon1;Parent=g14292.t1 NODE_1965_length_8311_cov_40.6918 . CDS 4323 5267 . + 0 ID=cds.g14292.t1;Parent=g14292.t1 NODE_1965_length_8311_cov_40.6918 . exon 5723 6379 . + . ID=g14292.t1.exon2;Parent=g14292.t1 NODE_1965_length_8311_cov_40.6918 . CDS 5723 6172 . + 0 ID=cds.g14292.t1;Parent=g14292.t1 NODE_1965_length_8311_cov_40.6918 . three_prime_UTR 6173 6379 . + . ID=g14292.t1.utr3p1;Parent=g14292.t1 #PROT g14292.t1 g14292 MTSDINARTVWRGDARYEELRTDVWNQRKEFRVPAGILRPETTDDVCGAVALAKDKGLKVAVRSGGHSWWGASVRDDSLLIDLSNFNGVEIDVSTKTATIGPAIRGRDLASALAAKGLFFPVGHCSTVGMGGFLLAGGLGWGFGSLGPSCFHVLSFDAVLANGQKVSIDTAAPGEHADLVWAQRGAGPGFPAVITSFKLRVIDMPVIYSLTTVYPIDELKSLGIWSDGMMKSGAISPQVEYTMFAAPAPPPLVEKGFKRVAVVSASIIGATHEECVAALAPAACYPGASKAIFHVGAHPVTLFELLDESDGGFMPGRYTSNVCFTNLDAESLYSTIAPLVASPPDSRSLVFMIPTAPPPPGFTPPDAAMSVMGNTVCGLYGISSDSKLDVACASWVASVTSAVQPNAYYTGECNMVAAKDRASMCFSALAWERLARVRASYDPQSLFVAYPTECEISVPNDPTC* # ORIGINAL: g347.t1 original gene structure, not modified by PASA NODE_2264_length_6996_cov_41.3604 AUGUSTUS gene 117 4002 . + . ID=g347;Name=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS mRNA 117 4002 . + . ID=g347.t1;Parent=g347;Name=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 117 431 . + . ID=g347.t1.exon1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 117 431 . + 2 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 632 963 . + . ID=g347.t1.exon2;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 632 963 . + 2 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 1101 1788 . + . ID=g347.t1.exon3;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 1101 1788 . + 0 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 1943 2130 . + . ID=g347.t1.exon4;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 1943 2130 . + 2 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 2379 2520 . + . ID=g347.t1.exon5;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 2379 2520 . + 0 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 2798 2964 . + . ID=g347.t1.exon6;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 2798 2964 . + 2 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 3115 3402 . + . ID=g347.t1.exon7;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 3115 3402 . + 0 ID=cds.g347.t1;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS exon 3628 4002 . + . ID=g347.t1.exon8;Parent=g347.t1 NODE_2264_length_6996_cov_41.3604 AUGUSTUS CDS 3628 4002 . + 0 ID=cds.g347.t1;Parent=g347.t1 #PROT g347.t1 g347 HIQTVLTRVGQFCLTIILIWVAIELVIQFGARDQPCSLSSAGACPTLSNALVILIGGVPIAMPTVLSVTMALGAMQLAKKRAIVTRLSAVEELAGMDVLCSDKTGTLTMNKLSISLPDLYPTNGHTADQLLSYAALSSKAEDGDAIDVCLHNAAPDHEELWRTHTRTGFLPFDHVTKRTVSTLTNTVTGETFRLAKGAPQVILQRDSRRDQIMDEVNDKIGEFARRGLRAIGVAISRDDPEKCTSKDATWDLVGLVPLVDPPRTDSAETIVEARRLGINVKMITGDQIAIAVETARQLGMKSDQMYRATIFMTPAVAPEGAAVDAGGVVSTEGVTSAEADGAGAALLMRRELSYQRNRGGGVGARDGGGPPTTATATAATTTTTASVQVEPPSVDDIVEEADGFAEVFPEHKYDIVKRLQDRKHIVGMTGDGVNDAPALKKAQIGIAVADATDAARAASDIVLMEPGLSVIIHAIVGSRKIFQRMKNYATYSVAMTVRIAFTFGLLTVVFDWYFTTFVMLIIAILNDGTMITISRDRVVPSQSPDKWRLRDVFFTAIVLGLYLTLSTIVLFMLVRLTDVFQEAFGLATFRQLDVSPTCFNNHWIPSQTDTVRDVESVSTILYAYTNANDYTKGLVGDDPIACTATADPGSVGVTPTFVSTFGTTLNLVSFVAPSRSESFGCFDLTTCQYYCVCAQQLRRSESTRGLIYLTVSITGLATIFFTRTRGFAFRRRPSYAIMIAFAISQIAATFIGVYGFGGYPKGRDGFRGCGWGYGLVAWVWSLLWLIPLDLVKFAAIWMIEQFDKRRSTKKRNDLLKKSHAKAPPVGKSAA* # PASA_UPDATE: g348.t1, single gene model update, valid-1, status:[pasa:asmbl_3895,status:12], valid-1 NODE_2264_length_6996_cov_41.3604 . gene 4805 6917 . - . ID=g348;Name=g348.t1 NODE_2264_length_6996_cov_41.3604 . mRNA 4805 6917 . - . ID=g348.t1;Parent=g348;Name=g348.t1 NODE_2264_length_6996_cov_41.3604 . five_prime_UTR 6913 6917 . - . ID=g348.t1.utr5p1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . exon 6787 6917 . - . ID=g348.t1.exon1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . CDS 6787 6912 . - 0 ID=cds.g348.t1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . exon 6067 6519 . - . ID=g348.t1.exon2;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . CDS 6067 6519 . - 0 ID=cds.g348.t1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . exon 5416 5765 . - . ID=g348.t1.exon3;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . CDS 5416 5765 . - 0 ID=cds.g348.t1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . exon 4805 5128 . - . ID=g348.t1.exon4;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . CDS 5020 5128 . - 1 ID=cds.g348.t1;Parent=g348.t1 NODE_2264_length_6996_cov_41.3604 . three_prime_UTR 4805 5019 . - . ID=g348.t1.utr3p1;Parent=g348.t1 #PROT g348.t1 g348 MLFRQMASEILLSQTLEDSFDLIHELSVAGEHNMTVKKLFWETPDLYVHVLRQLALYLPSSPSGSGTPPTTPRPTTPRGGAQPTSPRGPKPSSEHCRADELEYALVILELLSNMMKEGEVVYARTLILTASRPCSLVDLLTCIVADPDRTKAGLSKGRGGRPEEDTGEIDRLVREITDAALRLFFYLVTVTQQALSGDRDLRKYSPAWLIRVMDGSGASGTNTGGAGASLSLSLSSSASFFSGVTSRDFRSRFLPRMMGRLMEYLAPTCPPLEPRDAVLMFQYFAFMHTLLKHGGDLGTHFKSAFIEEFRYFVRNPAFKRKLGDPYPINERTLFLVDQMLKLLRL* # ORIGINAL: g2890.t1 original gene structure, not modified by PASA NODE_4735_length_1289_cov_30.7611_potentialcontaminant AUGUSTUS gene 501 1055 . + . ID=g2890;Name=g2890.t1 NODE_4735_length_1289_cov_30.7611_potentialcontaminant AUGUSTUS mRNA 501 1055 . + . ID=g2890.t1;Parent=g2890;Name=g2890.t1 NODE_4735_length_1289_cov_30.7611_potentialcontaminant AUGUSTUS exon 501 1055 . + . ID=g2890.t1.exon1;Parent=g2890.t1 NODE_4735_length_1289_cov_30.7611_potentialcontaminant AUGUSTUS CDS 501 1055 . + 0 ID=cds.g2890.t1;Parent=g2890.t1 #PROT g2890.t1 g2890 MERVKNPHIKKTVDLSDLIVVPISRVIEFNENPLRLIKEVTEGMCSQFGYIEAVTEVKEVSPYGRIGRYTPEYEPEVKFTVIYTATIIYPPKGIELTAQLITATTQILRAQASPITVIIAEKNVNKDEFVLKGNFLYKRTGNDLVQVCEKNRNHYLRIRVNEAPIFCKGSNTIIVYGELVGLTA* # ORIGINAL: g1732.t1 original gene structure, not modified by PASA NODE_3225_length_3963_cov_42.0075 AUGUSTUS gene 273 1835 . - . ID=g1732;Name=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS mRNA 273 1835 . - . ID=g1732.t1;Parent=g1732;Name=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 1386 1835 . - . ID=g1732.t1.exon1;Parent=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 1386 1835 . - 0 ID=cds.g1732.t1;Parent=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 696 1119 . - . ID=g1732.t1.exon2;Parent=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 696 1119 . - 0 ID=cds.g1732.t1;Parent=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 273 425 . - . ID=g1732.t1.exon3;Parent=g1732.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 273 425 . - 2 ID=cds.g1732.t1;Parent=g1732.t1 #PROT g1732.t1 g1732 MARDGSGVMAESDTEDKREGAADAVIGDLSSTIAGSGVHEESASGVDARQSRESASQAPGGGDCRVDRGSEADAVGSADAVGSADAHGTDARGSGEHDGGGVGAEAHAAAPGGQSGVSGVSDDGARIDWTKLSQEEVFSKLNTTELGLSKDEAARRLQEDGPNALPEHKRNSILVFLGFIWNPLSWVMETVAVVSIILRDFPDFVLVFALLLVNACIGFYEEHSAGNAVAALMSTVAPRARVRRDGQWETLASRDVVAGDIVHFRLGDIVPADCKIINSGGEIMADESGLTGESFPAAKGTGDNLYSGSTIKHGEGEAVVHSTGVHSFIGRSAALVSSTEQT # ORIGINAL: g1733.t1 original gene structure, not modified by PASA NODE_3225_length_3963_cov_42.0075 AUGUSTUS gene 2816 3792 . - . ID=g1733;Name=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS mRNA 2816 3792 . - . ID=g1733.t1;Parent=g1733;Name=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 3702 3792 . - . ID=g1733.t1.exon1;Parent=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 3702 3792 . - 0 ID=cds.g1733.t1;Parent=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 3294 3397 . - . ID=g1733.t1.exon2;Parent=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 3294 3397 . - 2 ID=cds.g1733.t1;Parent=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS exon 2816 3025 . - . ID=g1733.t1.exon3;Parent=g1733.t1 NODE_3225_length_3963_cov_42.0075 AUGUSTUS CDS 2816 3025 . - 0 ID=cds.g1733.t1;Parent=g1733.t1 #PROT g1733.t1 g1733 MEVLNLRGDAAGAVALWRNMEVTAGVEPFSGAVLGHSGLQSAVLTAFALSGDFESARAVIADIDTHGYPRPSLAALNVLVGCCGRANATDHLVWLLEAMNGWGVYPDARMTSTLVNVCKLDPLSVLFAARQRRR* # ORIGINAL: g10542.t1 original gene structure, not modified by PASA NODE_2090_length_7785_cov_40.725 AUGUSTUS gene 5157 7659 . + . ID=g10542;Name=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS mRNA 5157 7659 . + . ID=g10542.t1;Parent=g10542;Name=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS exon 5157 5309 . + . ID=g10542.t1.exon1;Parent=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS CDS 5157 5309 . + 0 ID=cds.g10542.t1;Parent=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS exon 5499 6766 . + . ID=g10542.t1.exon2;Parent=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS CDS 5499 6766 . + 0 ID=cds.g10542.t1;Parent=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS exon 7083 7659 . + . ID=g10542.t1.exon3;Parent=g10542.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS CDS 7083 7659 . + 1 ID=cds.g10542.t1;Parent=g10542.t1 #PROT g10542.t1 g10542 MADDEDLDSFRSLWSAVTKALAHPADEHAFRRAEALLVRHRPSFISLLESPPRNPNDKRQVEGGEIIVNGLRRRLDKTMVSDALNLAETLKISELSAASLVIEADVRRLRYGSDRFRTALHMYHHERWYLLSTLLLIIKACLLDLHSQPIESMLHAYASALLEERIVAKILHHLGAIKPGSMPEASQGYARDELRLLAQCLFYISYQFPVKEADVKQMAYLVKKPDTFENVGSSGSGASASGPSFGAAAASTLGGAAGVAGSSSGLGQARGSASGNGTPPTPFNAIQATVLMALLSALDVPQPEDGVSAGDVALYQDAQFVNAFGNELRSQWESWQAHSIVNLAWSLFLFNGGGVPTDASSDETAADVIAWEAIGEDCFAAIADYVLPSDPFARGEDDREFFLSIVDTMVRAIIERASHRLRELKLIEEEAVRSQQQQQYQQQVLTTRTLTHRFRDLLRVMAATYTDEPDLAERYWNQHEQFLRAASDCQTPAHLVAYIDLLSALASGRECATRCFEFLRRRGAASAIVSLDHFLHVIDRYQSELRSSVAPADMGTPGIGRLAGVPPQPKEIRPEEAVGLEAIMRLIGRVVKGSEVARSALHDAFSRRERSIQHPLFALMGCPVPPSLKAEILKVLAAFACAPDIAPQLWSLLDASQIVPSLETTP # ORIGINAL: g10541.t1 original gene structure, not modified by PASA NODE_2090_length_7785_cov_40.725 AUGUSTUS gene 765 4187 . - . ID=g10541;Name=g10541.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS mRNA 765 4187 . - . ID=g10541.t1;Parent=g10541;Name=g10541.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS exon 765 4187 . - . ID=g10541.t1.exon1;Parent=g10541.t1 NODE_2090_length_7785_cov_40.725 AUGUSTUS CDS 765 4187 . - 0 ID=cds.g10541.t1;Parent=g10541.t1 #PROT g10541.t1 g10541 MAHTLRRATAWLNKGIVRHITGVSLFQSLGRRPLLAVQPARGYAGKGEPWHPRSWSPRWVSRGRERGDLENVNPTPAYYDMRRKMAELDDGGRLESAIASGSPTTAQVKRYVLLKKLEGDLKSAFGALELSRRLGQEAEWSRGLHIAYILLCGHMKRMDLASRAHTNMQTLGHQVGADTVKAMIAAIVLAKKPTAIHELHNSGIFTRDLLETADVQHALLFYFHRTHQPDQLSAFVRSLMANTSMVITRSVYSHALRVCSLHGDAQLCFDIILELRRLDLPVLPRDLLEVERACGRCLQPAAAMWVAQLLGAMAPRLISEMNRMCGGPSPTLRRLKRELDDRFPLLIEAFAAKGDCLTAFAVAELVYARGTLLNRDALIALPRSVFPHGAGLGRFRELFLQHPAFKDEKAIFTPPTLPILSSRNDTRQDIMRRYMCGWAMFSKRLLDFGRLNYLSVGAYFDDLFHFEVLASSVRACDPESFDTIIAWAPSLFWRNRKILKEIAERDELNGAVGASRRMETRLDMVFAKYSVTELEAMRTHLNAKGQWMDRELQIRSIRWKQAAVREFTSYNEAISRSSQAETRGVGDKAAVDADNFAAEQCTVRADVEVHGGRLRLVTAGLDQSVAARVRRDSLSPNWSLIDTDEDQELVSSRLDATTQPPSDFDSFVQRKVKEMQSSMGKMAESIAVAYRSETQPVAPLQLTESLAATPRYMPEDAFNDLVENIFPNGWSQPVDTPDVFKSYFEEHEGTRRRDSVGNYDDLNGGGRTSATHAIVGTGVGAQVAALASSPEVSIEGRSSFGPGDPNTTTLNPKGTKRPAVFIDSPVIMPSISASAANTNAVKVGKPSGGGLKAVVNPRRKDDGVQIVPGVPVARAKRVDVGEVGDGKYSDAAGLTYSTLLEKVNKWHVAPKDVIDTASATNTTNTNTTANANAAALAQDDVVIGFSVLGNEPQVSTGEALEVPTPQRTRWERFPPRSRSLLAFTSDQTPPPPGPVDDKQVALDVSTRVFDEFVTLRAEDLIAGKSPSEYKMYAKTFLHKFIADKRDKGLFAMKNINSMVTSLVPSPAANDETVDPWMVAGGDPWVGATEQPQPQQQHSQLQQQQEHKQQQQQQRYDHPLPSSDFGTAGDLDVGEEMGRFR* # PASA_UPDATE: g9778.t1, single gene model update, valid-1, status:[pasa:asmbl_338,status:12], valid-1 NODE_1090_length_14044_cov_49.4251 . gene 17 2990 . - . ID=g9778;Name=g9778.t1 NODE_1090_length_14044_cov_49.4251 . mRNA 17 2990 . - . ID=g9778.t1;Parent=g9778;Name=g9778.t1 NODE_1090_length_14044_cov_49.4251 . five_prime_UTR 2905 2990 . - . ID=g9778.t1.utr5p1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 2741 2990 . - . ID=g9778.t1.exon1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 2741 2904 . - 0 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 2473 2581 . - . ID=g9778.t1.exon2;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 2473 2581 . - 1 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 2205 2295 . - . ID=g9778.t1.exon3;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 2205 2295 . - 0 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 1675 1815 . - . ID=g9778.t1.exon4;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 1675 1815 . - 2 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 1273 1379 . - . ID=g9778.t1.exon5;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 1273 1379 . - 2 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 892 993 . - . ID=g9778.t1.exon6;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 892 993 . - 0 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 557 676 . - . ID=g9778.t1.exon7;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 557 676 . - 0 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . exon 17 214 . - . ID=g9778.t1.exon8;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . CDS 92 214 . - 0 ID=cds.g9778.t1;Parent=g9778.t1 NODE_1090_length_14044_cov_49.4251 . three_prime_UTR 17 91 . - . ID=g9778.t1.utr3p1;Parent=g9778.t1 #PROT g9778.t1 g9778 MAQRTPTPLTAPPLSEAAQTLIQERNDFVALLEQVTRLDSTVEDHESKLAQMVLRRLEAAGSSHEYEMYRKQMREESAENERLKLIAEKLRYRRREEIELRLKDDIASTRIKYDQLRGSLYTSPQFVQQLYNGLGKHLWMNVCSMRSLRDKEAKISYAAVLTEMCGTLAIYMSRNEGDPRLEVVRFQPLIPEDATLACCIKKSKRYGAEHQWFMSAKSGVGYLCGVIIVPGTKAEGFTIHRHRVIVKSQIEASELSACAYSKSGQCIITAAKQWMTIKAWDSTTLDAMWQCSLTSTSVNQSKLNSITDGELWSEHSSE* # PASA_UPDATE: g9780.t1, single gene model update, valid-1, status:[pasa:asmbl_339,status:12], valid-1 NODE_1090_length_14044_cov_49.4251 . gene 11707 14001 . - . ID=g9780;Name=g9780.t1 NODE_1090_length_14044_cov_49.4251 . mRNA 11707 14001 . - . ID=g9780.t1;Parent=g9780;Name=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 13917 14001 . - . ID=g9780.t1.exon1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 13917 14001 . - 0 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 13449 13655 . - . ID=g9780.t1.exon2;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 13449 13655 . - 2 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 13179 13314 . - . ID=g9780.t1.exon3;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 13179 13314 . - 2 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 12704 12930 . - . ID=g9780.t1.exon4;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 12704 12930 . - 1 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 12475 12601 . - . ID=g9780.t1.exon5;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 12475 12601 . - 2 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 11903 12041 . - . ID=g9780.t1.exon6;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 11903 12041 . - 1 ID=cds.g9780.t1;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . exon 11707 11748 . - . ID=g9780.t1.exon7;Parent=g9780.t1 NODE_1090_length_14044_cov_49.4251 . CDS 11707 11748 . - 0 ID=cds.g9780.t1;Parent=g9780.t1 #PROT g9780.t1 g9780 MGPAGSAMGRDQLPPHTPADGMGAVGRREDFSMREWLASLKLDSYAELFDKESISLDILAEMAHDDLKELGVAAYGHRHQLLKNAKARLAAAAEVRTGISCVYPPSWVWPATFDALHVQDLDGTHADRIYVEQMMQMTIRHHRGDAGGVFSNYKITSVKRVQNRRLWERYWYRRQLVAESNAGEPNERLLFHGSPFVLPIVDKGFDERHAYIGGMFGAGIYFAEESSKSNQYVNGIGGGAGCARHADKCCYICERQMLMCRVALGRPCVYTTAQKIPHAPPGHDSVIGEPSPAGLVYKEYVIYRGEQAYPEYLITYNILP* # ORIGINAL: g9779.t1 original gene structure, not modified by PASA NODE_1090_length_14044_cov_49.4251 AUGUSTUS gene 4186 9849 . + . ID=g9779;Name=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS mRNA 4186 9849 . + . ID=g9779.t1;Parent=g9779;Name=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 4186 4348 . + . ID=g9779.t1.exon1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 4186 4348 . + 0 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 4473 4533 . + . ID=g9779.t1.exon2;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 4473 4533 . + 2 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 4798 4881 . + . ID=g9779.t1.exon3;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 4798 4881 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 5038 5127 . + . ID=g9779.t1.exon4;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 5038 5127 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 5459 5543 . + . ID=g9779.t1.exon5;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 5459 5543 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 5989 6086 . + . ID=g9779.t1.exon6;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 5989 6086 . + 0 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 6287 6550 . + . ID=g9779.t1.exon7;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 6287 6550 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 6850 6958 . + . ID=g9779.t1.exon8;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 6850 6958 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 7159 7320 . + . ID=g9779.t1.exon9;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 7159 7320 . + 0 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 7662 7713 . + . ID=g9779.t1.exon10;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 7662 7713 . + 0 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 7906 7989 . + . ID=g9779.t1.exon11;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 7906 7989 . + 2 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 8223 8341 . + . ID=g9779.t1.exon12;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 8223 8341 . + 2 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 8659 8852 . + . ID=g9779.t1.exon13;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 8659 8852 . + 0 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 9213 9259 . + . ID=g9779.t1.exon14;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 9213 9259 . + 1 ID=cds.g9779.t1;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS exon 9449 9849 . + . ID=g9779.t1.exon15;Parent=g9779.t1 NODE_1090_length_14044_cov_49.4251 AUGUSTUS CDS 9449 9849 . + 2 ID=cds.g9779.t1;Parent=g9779.t1 #PROT g9779.t1 g9779 MLDRISPTDIRTADQASHSPANMGDCPHLRGYKVDATLLRRVAERPPDQPYACLGCGEESEVWLCLECGHCGCGRYGKGHALEHSTKSTHLIAMNTESLECHCYGCDCYVGELDPPEDVIRIRKAFFENPRRRKQGRPKGSKSKKRLLAEMEDSSFSSPSPACRIPDAKRSVGQTGLRNLGNTCFMNAVLQSLSNTDQFRRFFLDAENDHPPAATVDEPAACVASVEKAMGPAPKRAKTALQVDAMDDDHAHAALSLSGSAGHSPYVTRRRNSVSIPTPSDISLSDEIRKVFRALWGMSEHGRISSYSPDSLLSTVWKFVPRFRGYQQQDAHEFLRYLLDRLHSELGPRVSDGRASIPSVVEETFQGDLLNEVRCLTCAKISRKHDPFLDLSLDIPERFIKKRARGEPKTSEVCQLRDCLASFTNVEQLEDSELYKCDHCRKRQSSTKKFSIASPPNVLCIHLKRFTWASYPRTKIDAYVEFPLKGLEIGDFCVGANGVASPHVGAGCVYDLIAVVVHHGAGAGSGHYTAFSFDERTGEWYDFNDCNVSVTTAEHVAESKAYILFYKRRGAGGVVVPASASARVSSENANCAPVADIVKQSTTKRKASKSADAARAVTVPKVKGGVKKGVALAKQGAGIVRAAEARTSSQSDEDDVPIVRQTRSKAKLAT* # ORIGINAL: g850.t1 original gene structure, not modified by PASA NODE_3922_length_2510_cov_29.7302 AUGUSTUS gene 92 922 . - . ID=g850;Name=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS mRNA 92 922 . - . ID=g850.t1;Parent=g850;Name=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 851 922 . - . ID=g850.t1.exon1;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 851 922 . - 0 ID=cds.g850.t1;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 543 655 . - . ID=g850.t1.exon2;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 543 655 . - 0 ID=cds.g850.t1;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 347 406 . - . ID=g850.t1.exon3;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 347 406 . - 1 ID=cds.g850.t1;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 92 134 . - . ID=g850.t1.exon4;Parent=g850.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 92 134 . - 1 ID=cds.g850.t1;Parent=g850.t1 #PROT g850.t1 g850 MGIKGLAILIGDKAPGAVKEQDIKNYFGRKVAIDASMSIYQFLIAVRSEGNVLTNEAGETTSHLMGFFYRTIRMIDNGIKPVYVFDGKPPKMKSGE # ORIGINAL: g851.t1 original gene structure, not modified by PASA NODE_3922_length_2510_cov_29.7302 AUGUSTUS gene 1450 2171 . + . ID=g851;Name=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS mRNA 1450 2171 . + . ID=g851.t1;Parent=g851;Name=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 1450 1613 . + . ID=g851.t1.exon1;Parent=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 1450 1613 . + 0 ID=cds.g851.t1;Parent=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 1927 2016 . + . ID=g851.t1.exon2;Parent=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 1927 2016 . + 1 ID=cds.g851.t1;Parent=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS exon 2138 2171 . + . ID=g851.t1.exon3;Parent=g851.t1 NODE_3922_length_2510_cov_29.7302 AUGUSTUS CDS 2138 2171 . + 1 ID=cds.g851.t1;Parent=g851.t1 #PROT g851.t1 g851 MSWPRAAVWGTQAGASSSGIAPSLDDRPLFECALCKLALPYDYLGKTPPFARKIVLLEDAFVMRDPFSVDSRHVTVGATCAACARIDASIDMGIR* # PASA_UPDATE: g5799.t1, single gene model update, valid-1, status:[pasa:asmbl_9642,status:3], valid-1 NODE_842_length_16971_cov_38.8228 . gene 14117 16350 . - . ID=g5799;Name=g5799.t1 NODE_842_length_16971_cov_38.8228 . mRNA 14117 16350 . - . ID=g5799.t1;Parent=g5799;Name=g5799.t1 NODE_842_length_16971_cov_38.8228 . five_prime_UTR 16317 16350 . - . ID=g5799.t1.utr5p1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . five_prime_UTR 16204 16212 . - . ID=g5799.t1.utr5p2;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . exon 16317 16350 . - . ID=g5799.t1.exon1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . exon 16107 16212 . - . ID=g5799.t1.exon2;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . CDS 16107 16203 . - 0 ID=cds.g5799.t1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . exon 15062 15949 . - . ID=g5799.t1.exon3;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . CDS 15062 15949 . - 2 ID=cds.g5799.t1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . exon 14636 14739 . - . ID=g5799.t1.exon4;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . CDS 14636 14739 . - 2 ID=cds.g5799.t1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . exon 14117 14356 . - . ID=g5799.t1.exon5;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . CDS 14204 14356 . - 0 ID=cds.g5799.t1;Parent=g5799.t1 NODE_842_length_16971_cov_38.8228 . three_prime_UTR 14117 14203 . - . ID=g5799.t1.utr3p1;Parent=g5799.t1 #PROT g5799.t1 g5799 MAARIATASLRSVPRAIVLSRSTPTAARIHSTAAKMDVNLPKSKKLFTPGPLGVSLSTKQAMLRDLGSRDKEFINTVKTIRSRLLELAKLPAGKYTTVPVQGSGTFAVEAVVTTFVPRTGGHMLVLSNGAYAQRIKQIADVLGIKTEFLEFPEDKKTDLAAVEEALKKHPITNVAIVHCETSSGVINPIEEVGKLVRKYRPDAFYFVDAMSSFGGVELDAKAANIDFLVSSANKCIEGVPGFSYALCDVEKLNKCKGNSRSLSLDLYEQNAGLDKSGQFRFTPATHSMLAFHKALQELDAEGGIPARAARYSENRRIIREGMRELGFKELLDDTHKGYIITSFHYHKDSKFNFEDFYSRLNAKDLVIYPGKTTKADCFRIGSIGHLFPADMKTLLVAIKEVLGEMGVQTPVKN* # ORIGINAL: g5796.t1 original gene structure, not modified by PASA NODE_842_length_16971_cov_38.8228 AUGUSTUS gene 7173 7448 . - . ID=g5796;Name=g5796.t1 NODE_842_length_16971_cov_38.8228 AUGUSTUS mRNA 7173 7448 . - . ID=g5796.t1;Parent=g5796;Name=g5796.t1 NODE_842_length_16971_cov_38.8228 AUGUSTUS exon 7173 7448 . - . ID=g5796.t1.exon1;Parent=g5796.t1 NODE_842_length_16971_cov_38.8228 AUGUSTUS CDS 7173 7448 . - 0 ID=cds.g5796.t1;Parent=g5796.t1 #PROT g5796.t1 g5796 MSSGKMTIRVKSWNGVAAWRWKVDDELCGICRMPFDGCCSDCRTPGDGCTLVWGVCRHVFHMHCIMKWLNSQAQADRQKCPMCRRDWEFVS* # PASA_UPDATE: g5795.t1, single gene model update, valid-1, status:[pasa:asmbl_9639,status:3], valid-1 NODE_842_length_16971_cov_38.8228 . gene 200 6842 . + . ID=g5795;Name=g5795.t1 NODE_842_length_16971_cov_38.8228 . mRNA 200 6842 . + . ID=g5795.t1;Parent=g5795;Name=g5795.t1 NODE_842_length_16971_cov_38.8228 . five_prime_UTR 200 311 . + . ID=g5795.t1.utr5p1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 200 533 . + . ID=g5795.t1.exon1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 312 533 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 811 945 . + . ID=g5795.t1.exon2;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 811 945 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 1188 1352 . + . ID=g5795.t1.exon3;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 1188 1352 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 1826 1940 . + . ID=g5795.t1.exon4;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 1826 1940 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 2114 2283 . + . ID=g5795.t1.exon5;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 2114 2283 . + 2 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 2532 2665 . + . ID=g5795.t1.exon6;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 2532 2665 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 2903 3062 . + . ID=g5795.t1.exon7;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 2903 3062 . + 1 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 3366 3515 . + . ID=g5795.t1.exon8;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 3366 3515 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 3925 4073 . + . ID=g5795.t1.exon9;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 3925 4073 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 4535 4667 . + . ID=g5795.t1.exon10;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 4535 4667 . + 1 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 4897 5033 . + . ID=g5795.t1.exon11;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 4897 5033 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 5331 5537 . + . ID=g5795.t1.exon12;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 5331 5537 . + 1 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 5707 5856 . + . ID=g5795.t1.exon13;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 5707 5856 . + 1 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 6079 6157 . + . ID=g5795.t1.exon14;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 6079 6157 . + 1 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . exon 6552 6842 . + . ID=g5795.t1.exon15;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . CDS 6552 6602 . + 0 ID=cds.g5795.t1;Parent=g5795.t1 NODE_842_length_16971_cov_38.8228 . three_prime_UTR 6603 6842 . + . ID=g5795.t1.utr3p1;Parent=g5795.t1 #PROT g5795.t1 g5795 MERRFAPVTTPIEQRRRSRAASQSTEGMTLLDIPNGGGLSSSPSKQEQQPAQQPHKPPSADVKSYGNRKDNSSQVEARDLMGDLPSVQLLREEPDYDVLSKIKRQSTRRNLQVEAVYGEAKELARLRTQPSLRDLNSYKTLQKEGNVRSIGLGDAKYDEAKQEFLRQKKSAPKKEKSGIVKLFESIGFALRRKKKRARDPIPFFRSDLKAIEAHLGTPVAAFFVLLRWVFLLDIVLATVWMSLAFLPQVISGANTTHPSIGGLDIFTGQGYFTNTPMFYLGYSPELDFDYNMPVAYIMAIGLCFGISFLVIMYSLASKYSQRNASDSIVLKDNLFPYGVAAFASWDHSIATQPGKQILRKAVTKRFAMLRMESESKPVIRIGWDKCELYMRRILINLLTLVLLGGAGVAIFFLLDWQADHPDSQGVTIVSSLVISSINFALPFLFAFMAQFEWWPNENMVVKVSIIRSFIVRIGSIIVIVISIWRTHREKNDCWLNYLGQQFYRQTLADIVINTGTTLVGEPLYVWLWLKRRGMGDRRDFNMQNNILDLTYRQSLIWLGSTFCPLLPILGALSCVLTFYVKKVIYLRFAKQPDRYFGASRSSNFFLLVMLCALLAVFAPIGYILVRETNTCGPHQNFSSIWGTIPAWIDGAPSALHAITQYLFTVAFLIPLCFFLMGYLYYAVKTTRHQKKRLDELELQLALETADKRFLLQYYRVQT* # PASA_UPDATE: g5798.t1, single gene model update, valid-1, status:[pasa:asmbl_9641,status:12], valid-1 NODE_842_length_16971_cov_38.8228 . gene 11409 13711 . + . ID=g5798;Name=g5798.t1 NODE_842_length_16971_cov_38.8228 . mRNA 11409 13711 . + . ID=g5798.t1;Parent=g5798;Name=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 11409 11415 . + . ID=g5798.t1.exon1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 11409 11415 . + 0 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 11544 11580 . + . ID=g5798.t1.exon2;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 11544 11580 . + 2 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 11797 11861 . + . ID=g5798.t1.exon3;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 11797 11861 . + 1 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 12022 12128 . + . ID=g5798.t1.exon4;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 12022 12128 . + 2 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 12354 12439 . + . ID=g5798.t1.exon5;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 12354 12439 . + 0 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 12859 12955 . + . ID=g5798.t1.exon6;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 12859 12955 . + 1 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . exon 13218 13711 . + . ID=g5798.t1.exon7;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . CDS 13218 13280 . + 0 ID=cds.g5798.t1;Parent=g5798.t1 NODE_842_length_16971_cov_38.8228 . three_prime_UTR 13281 13711 . + . ID=g5798.t1.utr3p1;Parent=g5798.t1 #PROT g5798.t1 g5798 MSDVTAVDGEFALVKGSGPEDKDFDVLIGHLEDVIVGDKFSKLQKDFMNKHYKEFEDTEENKFSYTEIFKKYTALVEKYLEDCLKERVPSFSMEKFIKKLEPRQDQVSGDIFDILLSFTDFNEFKSLMLSYRAEKEGTGPDLSGLVIQSSFKK* # PASA_UPDATE: g5797.t1, single gene model update, valid-1, status:[pasa:asmbl_9640,status:12], valid-1 NODE_842_length_16971_cov_38.8228 . gene 7842 10849 . + . ID=g5797;Name=g5797.t1 NODE_842_length_16971_cov_38.8228 . mRNA 7842 10849 . + . ID=g5797.t1;Parent=g5797;Name=g5797.t1 NODE_842_length_16971_cov_38.8228 . five_prime_UTR 7842 7982 . + . ID=g5797.t1.utr5p1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . exon 7842 8037 . + . ID=g5797.t1.exon1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . CDS 7983 8037 . + 0 ID=cds.g5797.t1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . exon 8199 8767 . + . ID=g5797.t1.exon2;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . CDS 8199 8767 . + 2 ID=cds.g5797.t1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . exon 8996 9348 . + . ID=g5797.t1.exon3;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . CDS 8996 9348 . + 0 ID=cds.g5797.t1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . exon 9636 9836 . + . ID=g5797.t1.exon4;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . CDS 9636 9836 . + 1 ID=cds.g5797.t1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . exon 10016 10849 . + . ID=g5797.t1.exon5;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . CDS 10016 10832 . + 1 ID=cds.g5797.t1;Parent=g5797.t1 NODE_842_length_16971_cov_38.8228 . three_prime_UTR 10833 10849 . + . ID=g5797.t1.utr3p1;Parent=g5797.t1 #PROT g5797.t1 g5797 MSGRDLRVFISSHRDRSDTLQVDRMFTKHGRTFADVDYDRLKEEAKARREAGEQSASKFKAIQKSTKESKTKAIVAHHKTRWAAECEELSRVCGKLEKDLLEKMRALALSSREVDPVVSSVFAELIIDEGKRAVELVHYGKGIREKVATVRSCVASVKHKGRGGAEGVREKPVAGPVHARMRALLEETKVTIGAAGAKLDTEEAALVKDIAASQRAFSDSPLLISHNATQMSPAAKIREPSGDAAVGSPTHRDDTSMQHDQNESLSNHHNAEIDNDGASGVPWELHALDCPDTRLFEGFALEFLVVDEKHRQQLDDLRARYADVVGNPNGGWSAQEHLRFVTLSDSHNGRPWHELVQRCLAEFPTRTRAQIVAHADWHHRHLNYRRRCKCVIRSWSDERKELLEAARDSFLESIARVEQAAAEAELNATVAQVRLERYERLLSWRRQKMEELRRRQEEEEVREREERERRRVEEERAIAEVREKHAKVGDYRQKKEESVRAKLEAEEKRQRQYAEAAQQTRTVNAVKVKRRARMFEARTEDRRRKEEEEEAKEREREERLERLRETVAVEAERDPMRLLQSTQTHKARMDKTAMDVAGSRPTLFSVHGYDEKSTYRDGRFRLAEAIRNAGLGGSEYARLAMDAMKPVVQPRRDLQSNVFKAAAT* # ORIGINAL: g7069.t1 original gene structure, not modified by PASA NODE_2096_length_7756_cov_43.5839 AUGUSTUS gene 2 169 . + . ID=g7069;Name=g7069.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS mRNA 2 169 . + . ID=g7069.t1;Parent=g7069;Name=g7069.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS exon 2 169 . + . ID=g7069.t1.exon1;Parent=g7069.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS CDS 2 169 . + 0 ID=cds.g7069.t1;Parent=g7069.t1 #PROT g7069.t1 g7069 QQQQQQQQQQQQQQQQQQQQQQQQQHHQHQQFQQQPQHQQGDAAGAGIWSVDSLI* # ORIGINAL: g7072.t1 original gene structure, not modified by PASA NODE_2096_length_7756_cov_43.5839 AUGUSTUS gene 6372 7620 . + . ID=g7072;Name=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS mRNA 6372 7620 . + . ID=g7072.t1;Parent=g7072;Name=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS exon 6372 6910 . + . ID=g7072.t1.exon1;Parent=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS CDS 6372 6910 . + 0 ID=cds.g7072.t1;Parent=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS exon 7229 7414 . + . ID=g7072.t1.exon2;Parent=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS CDS 7229 7414 . + 1 ID=cds.g7072.t1;Parent=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS exon 7608 7620 . + . ID=g7072.t1.exon3;Parent=g7072.t1 NODE_2096_length_7756_cov_43.5839 AUGUSTUS CDS 7608 7620 . + 1 ID=cds.g7072.t1;Parent=g7072.t1 #PROT g7072.t1 g7072 MTPGRHLSGAVWIMLLLLSTTTRAAPYRMKVGVITPPIDRDAILNSLGGAYSKTMVDLIAMAFAEVESRSTATAAAMNNSIAFDLVLGLSGASRQTALFSAVDMHVGGASVVMGCERSTDSIVASLYLSKFMLPMISYTSSSSVLSDKSAGFSSFMRTVSPDSAGAIAMATLVSQFGWKGVAVIYTDDEYAISFARDFTVACEAATIDIVVSGQILQQSPNASGKLDGLFDAIEAAHVRIVLHGA* # PASA_UPDATE: g7071.t1, single gene model update, valid-1, status:[pasa:asmbl_3490,status:3], valid-1 NODE_2096_length_7756_cov_43.5839 . gene 3680 5711 . + . ID=g7071;Name=g7071.t1 NODE_2096_length_7756_cov_43.5839 . mRNA 3680 5711 . + . ID=g7071.t1;Parent=g7071;Name=g7071.t1 NODE_2096_length_7756_cov_43.5839 . five_prime_UTR 3680 3833 . + . ID=g7071.t1.utr5p1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . exon 3680 3842 . + . ID=g7071.t1.exon1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . CDS 3834 3842 . + 0 ID=cds.g7071.t1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . exon 4066 4413 . + . ID=g7071.t1.exon2;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . CDS 4066 4413 . + 0 ID=cds.g7071.t1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . exon 4658 4724 . + . ID=g7071.t1.exon3;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . CDS 4658 4724 . + 0 ID=cds.g7071.t1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . exon 4889 5711 . + . ID=g7071.t1.exon4;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . CDS 4889 5286 . + 2 ID=cds.g7071.t1;Parent=g7071.t1 NODE_2096_length_7756_cov_43.5839 . three_prime_UTR 5287 5711 . + . ID=g7071.t1.utr3p1;Parent=g7071.t1 #PROT g7071.t1 g7071 MVVQHEGLPRSPFRDLTGSIFNNTSVSYGRNDTKTTHASADDVAHTALASHVMKRDIFMVRGANSPAKALSSGTLSSAALTDASRCGENVQVIVQGSVDDHFSRALQEVDRSKTKRRSMSSLSTLFDADNFRPAGIIKKRRVSEPMPISRLPLRERKLPASFWAPRNARRLDGCSDWHLSPDSGNAHVVRRLDSECFSSSSEDDATSQERGQEGILADFGDSCLGFDPVSVDDCESLLSAANVALPSVPLCLSSDLPTLCLEDLLTFDCAIDL* # PASA_UPDATE: g7070.t1, single gene model update, valid-1, status:[pasa:asmbl_3488,status:12],[pasa:asmbl_3489,status:12], valid-1 NODE_2096_length_7756_cov_43.5839 . gene 969 3214 . + . ID=g7070;Name=g7070.t1 NODE_2096_length_7756_cov_43.5839 . mRNA 969 3214 . + . ID=g7070.t1;Parent=g7070;Name=g7070.t1 NODE_2096_length_7756_cov_43.5839 . five_prime_UTR 969 1018 . + . ID=g7070.t1.utr5p1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . exon 969 1310 . + . ID=g7070.t1.exon1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . CDS 1019 1310 . + 0 ID=cds.g7070.t1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . exon 1574 1657 . + . ID=g7070.t1.exon2;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . CDS 1574 1657 . + 2 ID=cds.g7070.t1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . exon 1816 1974 . + . ID=g7070.t1.exon3;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . CDS 1816 1974 . + 2 ID=cds.g7070.t1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . exon 2129 2356 . + . ID=g7070.t1.exon4;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . CDS 2129 2356 . + 2 ID=cds.g7070.t1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . exon 2486 3214 . + . ID=g7070.t1.exon5;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . CDS 2486 3081 . + 2 ID=cds.g7070.t1;Parent=g7070.t1 NODE_2096_length_7756_cov_43.5839 . three_prime_UTR 3082 3214 . + . ID=g7070.t1.utr3p1;Parent=g7070.t1 #PROT g7070.t1 g7070 MIITDAVVHISSPHFFHCNCLCCKMAQPAHDLSSAFSSLNIDLTGKLIIKVQYEDDIRRIPIHNEDITYDELVLMMQRVFAGRIKSNDDLLIRYKDDDGDLVAILDNPDLTHAKAYGRILRLVVSVRQPPAPKEAPVNVRRAAATTIAALTKDLQRIRSTVDSLLEAIAKDDEDAKAAESKSAASAAAAKAKAESAPSRLLFDPLMQGADKKQDKQPQQQQQQQQPQQSYPQQQQAPVTMSAASAFPPITEDSFAIDRRASVPASTQSQPPLAQGIQQMQSAQAAPSPQLDAQSAYGAPPPGMALHSAPASAPPSSSVAYGQGMQSGGIGTQPPPQQQQQQQQQQQQQQYIPQRPSSQQSQHAQQQQVPAASMPPPPMGPSGVYDMSQYGYGAPAMPQSAPPQGGVQQMPGVQMPGQQPQAGYAYGGASYGNYGSYPSAQQSFGSGGYGQGY* # PASA_UPDATE: g7718.t1, single gene model update, valid-1, status:[pasa:asmbl_8624,status:12], valid-1 NODE_63_length_47234_cov_41.3691 . gene 46255 47114 . - . ID=g7718;Name=g7718.t1 NODE_63_length_47234_cov_41.3691 . mRNA 46255 47114 . - . ID=g7718.t1;Parent=g7718;Name=g7718.t1 NODE_63_length_47234_cov_41.3691 . exon 46255 47114 . - . ID=g7718.t1.exon1;Parent=g7718.t1 NODE_63_length_47234_cov_41.3691 . CDS 46479 47114 . - 0 ID=cds.g7718.t1;Parent=g7718.t1;5_prime_partial=true NODE_63_length_47234_cov_41.3691 . three_prime_UTR 46255 46478 . - . ID=g7718.t1.utr3p1;Parent=g7718.t1 #PROT g7718.t1 g7718 FGVLVWRSRHPGLNEYISDAVADVRSLAEHGLVRKACVVIVSPSQRRTVERFVFDIAYLPVDACGGEVGGGERLDAHVSGACSPEDAEAAFRGILARVAGCTRPVTASAQTPDDAEFRIVVHADPAHGSGSTINGASVATPPQGAFRVFAGSARPVERALRFSWADLPSAPVEPSGGAEGTAMPPTATVVQPLRTVHAGPMRVSLVVECRD* # PASA_UPDATE: g7717.t1, single gene model update, valid-1, status:[pasa:asmbl_8627,status:3], valid-1 NODE_63_length_47234_cov_41.3691 . gene 37933 45854 . - . ID=g7717;Name=g7717.t1 NODE_63_length_47234_cov_41.3691 . mRNA 37933 45854 . - . ID=g7717.t1;Parent=g7717;Name=g7717.t1 NODE_63_length_47234_cov_41.3691 . five_prime_UTR 45675 45854 . - . ID=g7717.t1.utr5p1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . five_prime_UTR 45479 45516 . - . ID=g7717.t1.utr5p2;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 45675 45854 . - . ID=g7717.t1.exon1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 45467 45516 . - . ID=g7717.t1.exon2;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 45467 45478 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 45225 45290 . - . ID=g7717.t1.exon3;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 45225 45290 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 45056 45121 . - . ID=g7717.t1.exon4;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 45056 45121 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 44608 44932 . - . ID=g7717.t1.exon5;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 44608 44932 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 43594 44420 . - . ID=g7717.t1.exon6;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 43594 44420 . - 2 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 42766 43353 . - . ID=g7717.t1.exon7;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 42766 43353 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 42274 42361 . - . ID=g7717.t1.exon8;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 42274 42361 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 41992 42134 . - . ID=g7717.t1.exon9;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 41992 42134 . - 2 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 41205 41383 . - . ID=g7717.t1.exon10;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 41205 41383 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 40766 40949 . - . ID=g7717.t1.exon11;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 40766 40949 . - 1 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 39769 40187 . - . ID=g7717.t1.exon12;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 39769 40187 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 39338 39507 . - . ID=g7717.t1.exon13;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 39338 39507 . - 1 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 38917 39093 . - . ID=g7717.t1.exon14;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 38917 39093 . - 2 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 38608 38741 . - . ID=g7717.t1.exon15;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 38608 38741 . - 2 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . exon 37933 38426 . - . ID=g7717.t1.exon16;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . CDS 38043 38426 . - 0 ID=cds.g7717.t1;Parent=g7717.t1 NODE_63_length_47234_cov_41.3691 . three_prime_UTR 37933 38042 . - . ID=g7717.t1.utr3p1;Parent=g7717.t1 #PROT g7717.t1 g7717 MDAPGPALPAYAAEALNPAVSVSSSADASAIELGTRTSVPSVSGNAVPPPSGVVAAPTTHPAQKRGTLSGKRTSGSALSPAPIRPSLSTSDLAAISAAGSETPAVAPLKRHSSLTDIANGKVAIGHQDSVGDLSSMLAPPDRAKSTSMSCIVPGEAAFRERTSSRSRGLAREPCILLDIALMSDAATGTRKLTVGVVEAKDIRAHLTTPLEDPYVELCLHLNSNSQKGSRTRGGSVPRQSSSPFIQYSAKTEKDVQPRQTTSATPRNQGSRDREPSVPIVPIVMIDCPDTERTDDQLVTGAQVGMTLPLSPQRTSIPLKDGDGSSSRPRSNSYAQAITTKQQHPNSPGMAADGMRRGTGASSSSSSNGAGQQCAGEGEGDMDGRPEVVWKESMDLVWMDSETSNAKATRTEAISQAVTEKFTSMSKQFPFLQVSLFNGDGEFFGEVVVRVKELEENVRLVQWFTLKRRKSSSGLSRFVNSAVNNVAGNVGKKSNRLALHDGGAGHRLLSEGDDDGRTRCTKIISLRTAVTIMVAIQLMIAVSIAVAVTYSAAYNQVVDVGKQLMNNIGEAISQEIESVFIPPLVSVIDATSPLIMLEPVLDPLVDFPILEHIFGYNFFAGSAFSVMTQVYLGTPTGLFVGAGQEFVDNSLRTPFVSEVTFYNQSNTDNPSTRYVYGVNKNCPLLLRSCRLANTSNLISQASYNVLKRPWYTLGADPTTVTPMYTPPYIFAVTSQLGITAVNPYRDPLNNTLLAVVAVDTVLQEINDFMAQINYMGNGYAYIVEKHSGYLFASSLNAPLINSAGGRVYAQTSVNEDIADTSNAAKSRVCPPIYSTNTSILMSWDTCLPVNQTLTLSDNFISVRWLNYTYYEPLLIITVIPTSDFTRDLQNALNIVGGVSAAILVASVLIAILIVNLITRQLTRTTKRLSEFSRLNFSGGVGERDLHSPLKEVSRVSYALLHMRASLRSFSKYVPYEVVQFLADMNLEATLGGDRRVISIFFSDIKDFTSISEMLDLEVLIDLIGEYLEEMSQIISRHNGLVDKYIGDAIMALWNVPTELIDHPLYTCAAALECHARLEELQQEWGRRNLPEIRARIGIHTGEAIVGNFGAKKRLNYTAIGDSVNLASRLEGLNKPYGTELMVSDETYAHVSSKYLCRPLDVVAVKGKSTPSTVYELICSMDAASGAQVDAAHHFDRAFQLMLARDFAQARVMFEAYLKEHPTDIPAEMHLSSCRQYERDPPGSEWAGVRVMHEK* # ORIGINAL: g7710.t1 original gene structure, not modified by PASA NODE_63_length_47234_cov_41.3691 AUGUSTUS gene 1849 2898 . - . ID=g7710;Name=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS mRNA 1849 2898 . - . ID=g7710.t1;Parent=g7710;Name=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 2667 2898 . - . ID=g7710.t1.exon1;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 2667 2898 . - 0 ID=cds.g7710.t1;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 2301 2350 . - . ID=g7710.t1.exon2;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 2301 2350 . - 2 ID=cds.g7710.t1;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 2103 2170 . - . ID=g7710.t1.exon3;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 2103 2170 . - 0 ID=cds.g7710.t1;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 1849 1909 . - . ID=g7710.t1.exon4;Parent=g7710.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 1849 1909 . - 1 ID=cds.g7710.t1;Parent=g7710.t1 #PROT g7710.t1 g7710 MGDIKCGRALLGAWVVALVLAALTTAPVADAHIGKADASCDSLGFDEHLVCSSCDKLKDLGLPESAEANCRACCFEDQFVRGPEVTEFPNLEVAYKGGASPTLYLLDAAGVVVETVRIDSWNKNSIKEFLREKVAA* # PASA_UPDATE: g7711.t1, single gene model update, valid-1, status:[pasa:asmbl_8628,status:3], valid-1 NODE_63_length_47234_cov_41.3691 . gene 3172 5510 . + . ID=g7711;Name=g7711.t1 NODE_63_length_47234_cov_41.3691 . mRNA 3172 5510 . + . ID=g7711.t1;Parent=g7711;Name=g7711.t1 NODE_63_length_47234_cov_41.3691 . five_prime_UTR 3172 3205 . + . ID=g7711.t1.utr5p1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 3172 3354 . + . ID=g7711.t1.exon1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 3206 3354 . + 0 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 3479 3564 . + . ID=g7711.t1.exon2;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 3479 3564 . + 1 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 3671 3803 . + . ID=g7711.t1.exon3;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 3671 3803 . + 2 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 4104 4290 . + . ID=g7711.t1.exon4;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 4104 4290 . + 1 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 4545 4596 . + . ID=g7711.t1.exon5;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 4545 4596 . + 0 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 4935 5038 . + . ID=g7711.t1.exon6;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 4935 5038 . + 2 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 5158 5211 . + . ID=g7711.t1.exon7;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 5158 5211 . + 0 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . exon 5392 5510 . + . ID=g7711.t1.exon8;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . CDS 5392 5430 . + 0 ID=cds.g7711.t1;Parent=g7711.t1 NODE_63_length_47234_cov_41.3691 . three_prime_UTR 5431 5510 . + . ID=g7711.t1.utr3p1;Parent=g7711.t1 #PROT g7711.t1 g7711 MACLRSLVFVRANPTVHAHVVRSVRLHTSASALATEGSQAAEQTTQAHDEEQALKTQLLDTALDNVPHYGWTTDAITEAAVQLGLPRISHGILYRGPIDLVDHFVESANARLVAHVTQHGLTSADLHGRLGEAMRLRLSMQIPYARQWPQAMALMVHPLHFAHSSKHLMRLVDDIWFHAGDRATDFSWYTKRTALAAIYNATELFMVQDTSPDYQATWTFLQSRLDHARRVAEGKEELLRAATVAVHGASALYTTIRNVTGFNDTRR* # PASA_UPDATE: g7709.t1, single gene model update, valid-1, status:[pasa:asmbl_8620,status:12], valid-1 NODE_63_length_47234_cov_41.3691 . gene 277 973 . + . ID=g7709;Name=g7709.t1 NODE_63_length_47234_cov_41.3691 . mRNA 277 973 . + . ID=g7709.t1;Parent=g7709;Name=g7709.t1 NODE_63_length_47234_cov_41.3691 . exon 277 973 . + . ID=g7709.t1.exon1;Parent=g7709.t1 NODE_63_length_47234_cov_41.3691 . CDS 277 840 . + 0 ID=cds.g7709.t1;Parent=g7709.t1 NODE_63_length_47234_cov_41.3691 . three_prime_UTR 841 973 . + . ID=g7709.t1.utr3p1;Parent=g7709.t1 #PROT g7709.t1 g7709 MDYHHDVTDSGLLPQRRVDEQQQPNGANNGGHHERNTAQHAQPETTPTTPEHRGAHTIIPPSPAKRSKLMNQRKTEETQYEAYKAQQRANPQYTAGSGRLGGSVDDEAAVRERQAAAQRRAKAEKMLLEEKRKKEEKQAEQDEIDRKKAIQRQKALDNEERARIEREARTPTAEELREKRLRHFERK* # PASA_UPDATE: g7715.t1, single gene model update, valid-1, status:[pasa:asmbl_8629,status:3], valid-1 NODE_63_length_47234_cov_41.3691 . gene 31911 35230 . + . ID=g7715;Name=g7715.t1 NODE_63_length_47234_cov_41.3691 . mRNA 31911 35230 . + . ID=g7715.t1;Parent=g7715;Name=g7715.t1 NODE_63_length_47234_cov_41.3691 . five_prime_UTR 31911 32172 . + . ID=g7715.t1.utr5p1;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . exon 31911 32660 . + . ID=g7715.t1.exon1;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . CDS 32173 32660 . + 0 ID=cds.g7715.t1;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . exon 32798 33803 . + . ID=g7715.t1.exon2;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . CDS 32798 33803 . + 1 ID=cds.g7715.t1;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . exon 34026 35230 . + . ID=g7715.t1.exon3;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . CDS 34026 35072 . + 0 ID=cds.g7715.t1;Parent=g7715.t1 NODE_63_length_47234_cov_41.3691 . three_prime_UTR 35073 35230 . + . ID=g7715.t1.utr3p1;Parent=g7715.t1 #PROT g7715.t1 g7715 MKCHSVNVTEDTLTSGGIPNNLAINVPIFFGLFMFFCLFWRQRHSGFVNLPQKNANILASRRSTTSLEDLARLDEEEERLFEEATDTKSKFAWIIPLLRMPDHEVSVRCGIDAAQYLNLLRNLLKAVFTLMLVNIVIVLPINYTASENYPGFSRTTISNIPHNSPRLWVHILFLYINVAVVLYFLQRHRLFVTRSQGNVRKESERSLIITNIPTWLKDGERIADHFRGVYPDGSVVSVQLARDVRDVIRSAKKLEVAKTNYSRARALRKKTGNRTETRVGGVLCFGGQLVDAEIYWRNQTENCALDLSSKRRSILSGPNIGTAFVSFADKATPREVLDDYLGMHPRRSHQTSALRTDSWQCQYAPHPRDVEWMNLNVGFWEAKLRFLIVNGGLITLLAFYTTPLSIVTALQGLRSSDTISVSKTTSNNPILTSYLPTVFLLLLGVALPWIVGYTAWFEAFKTKSTFAFSCAVKSFAFTLTSVLILPSIALTSIDAIVQLSVREDLSVVDKLECVFLPDDGAFFVTLTITAGFLGTAIELLRLWDFIMYRWLKWRAVTDKELKNARRASYDTFDYGMQYPLVLTMFCVVLVFSTTCPIILIFGVFYCFNKMLVDKYNLVLGKPATFHTDGTLVNVASNFVIACTAVYAAYITGFFALKQGWNSIHTGMSLLCFLCICVVAVLKRRGILHGRFGMDRKPKRVFDLTPQVEGAYIPELLLDTGAEELLGLEDENDPLSRPGSRTITPSASTDNLVLPSGEIAYRTSSRASARDEAAGGHDAGGSGGAGVSGGAGVVDDSLIIMAASKLAMDTHGRKNNFIVGGSVSDSDSGDNGDDCDNGDNIGLIVRR* # ORIGINAL: g7716.t1 original gene structure, not modified by PASA NODE_63_length_47234_cov_41.3691 AUGUSTUS gene 35257 36546 . - . ID=g7716;Name=g7716.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS mRNA 35257 36546 . - . ID=g7716.t1;Parent=g7716;Name=g7716.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 35257 36546 . - . ID=g7716.t1.exon1;Parent=g7716.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 35257 36546 . - 0 ID=cds.g7716.t1;Parent=g7716.t1 #PROT g7716.t1 g7716 MVHIVELDEPHAALVKADLDSRHHAVIEEAPASSPSPPPLHAHLHSHARVFSPAALHPTRRLPSRGRHAYPHSYVDGPVVEDVSEVGGTPYNSGAQPITGRVDFFTPTSCRKHGHLEDEDASMGPMRKSPRMGSGSDSRLLRGMPPVFNLGASFDACINNFLGNLWGAASEMAPLAGASLSMAGLPGGGAMGFGQMAAQQATSASNMNPPTLASPPSPPQPLSPVPSMVDECDASDVGGFPLVAQQSPMMGEGASQLTASVTGGYFAGEPPAVGGVSHDCCFGGSDTGGVFAGARLGGMRSVEHELASQFVGAFVGALAQPDPGAVCSLLHPEAFVSIGGTQWRGPAEGGVALHSLYAGCLPDVRTVDASPMGGSCVLILVNGIMAPRNCGTFPLASQFAQHFALAPVAVDGLTTSFVITNTCWMPIPP* # PASA_UPDATE: g7712.t1, single gene model update, valid-1, status:[pasa:asmbl_8621,status:12],[pasa:asmbl_8622,status:12],[pasa:asmbl_8626,status:12], valid-1 NODE_63_length_47234_cov_41.3691 . gene 5606 14085 . - . ID=g7712;Name=g7712.t1 NODE_63_length_47234_cov_41.3691 . mRNA 5606 14085 . - . ID=g7712.t1;Parent=g7712;Name=g7712.t1 NODE_63_length_47234_cov_41.3691 . five_prime_UTR 13924 14085 . - . ID=g7712.t1.utr5p1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 13921 14085 . - . ID=g7712.t1.exon1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 13921 13923 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 13691 13730 . - . ID=g7712.t1.exon2;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 13691 13730 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 13461 13549 . - . ID=g7712.t1.exon3;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 13461 13549 . - 2 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 13324 13374 . - . ID=g7712.t1.exon4;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 13324 13374 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 13153 13212 . - . ID=g7712.t1.exon5;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 13153 13212 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 12794 12948 . - . ID=g7712.t1.exon6;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 12794 12948 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 12247 12447 . - . ID=g7712.t1.exon7;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 12247 12447 . - 1 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 11941 12079 . - . ID=g7712.t1.exon8;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 11941 12079 . - 1 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 11613 11733 . - . ID=g7712.t1.exon9;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 11613 11733 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 11367 11453 . - . ID=g7712.t1.exon10;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 11367 11453 . - 2 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 11092 11205 . - . ID=g7712.t1.exon11;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 11092 11205 . - 2 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 10625 10803 . - . ID=g7712.t1.exon12;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 10625 10803 . - 2 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 10311 10469 . - . ID=g7712.t1.exon13;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 10311 10469 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 10019 10117 . - . ID=g7712.t1.exon14;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 10019 10117 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 9638 9731 . - . ID=g7712.t1.exon15;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 9638 9731 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 9106 9379 . - . ID=g7712.t1.exon16;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 9106 9379 . - 2 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 8737 8923 . - . ID=g7712.t1.exon17;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 8737 8923 . - 1 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 6134 8572 . - . ID=g7712.t1.exon18;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 6134 8572 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 5854 5970 . - . ID=g7712.t1.exon19;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 5854 5970 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . exon 5606 5638 . - . ID=g7712.t1.exon20;Parent=g7712.t1 NODE_63_length_47234_cov_41.3691 . CDS 5606 5638 . - 0 ID=cds.g7712.t1;Parent=g7712.t1 #PROT g7712.t1 g7712 MSAPTVNSLGPEIVETVRKAAGPDIFFDAVVKLFVKGRGEDKAVVITATRIMVFSIGKPCKVELSVHLLDVYLVQSLAEDEVCYKCRGDRTVFFKTSPDTVINAIACTRAAMKISFPLAVEALLKYDFQPNSRGDLVLMHDVVVGVAPSPCGSYSRSYVGYCDLLGVPINHEIVWDIDNIYAQNNTKEFALNDVGNIEGKEAIPIIQALTFNSWFTKISVRDTRIGSDALGAIVELAKKSRTLEEIIISSVNINSGFVQALTDSLTSNIGLNLQGIDLSGNNIEDKGIMALAGALQSTSGNLSSINVSHTGFGPKGAVALSMALRKNVNLLSTLNKLNISDNQILQEGLTSILDFLAMPNAITHLNLSNTGGVIENAFAALQRGCGLNLCGLDLSNNKFTLKKGKDFTVPISFDQFFQTAGCLKELNLANTKIPDSAIKSLFNALFANPMLHELELRLEGNDLGIMGARIIGSMMPKIQCVSRLDISDNDFTDEAIFYIVGGLALNTTLKHLSLAGNFKTKSKERAKAIKAINDMLSSPEIALQSFSLADCKLKTDIVPVLDVIGANETLSSLDVTGNGFGDKGAGALAKALQLNRTLLELHWDDNQTSIAGFQEIAYALSRNPSIKRMATPIQDVAAVLKTHSSLMMKSLTKIEAALQRNNNTAYKTGPVEDTSTTVGPQMLQNNAQVENIDRLIIQARQTIGRMKELNSADASGAIELAVTSLAMAEQSRKALADLPFLVDEIAQQQAQTIADEMTTTVGHIDKALDSAFDDAVTRMFARLPGGTNQVGAGGVQDTPLVDAKVMYNLTLNLRGGRVSRAYLEQLLLKSAGRDVSNKARETCLAAGSAISNVAFEATRDYIERCIDSCNQILNAVRESAVTRRLSQGQMSAPSFERRLSQSAEDSPAAPSPVGPPKSDSIVEVLEPTEAPKPRAESKPLEPTVVVAAAPAPAPAPAPAVAAEAPSAGATLAVKAEAVPRESPATKKKREARRSMLLLDEDAGTETDDRVEAAAAATPAPTPAPAPAPAPAPAPAPPVEAKPVEEVKPRSSSAAVEPVKPRSSSAAVETTPRASSADAKVFKQDRVEVEVELNAVESTGTLSSAVTKERPKGTNRRPPTRRPRPTNVGEEEGEGEEPEPVAASAPAPAPAPAAVEEAKTEEKKKTSLFGGKKDDDKKEREKKEKEEKDRKEKEEKERKEKEKKEKEEKERKEKEEKERKKKEEEERKEREKREKKEKEERDKKEKEERDRKDKEAAKKKSDPAPAVAPASAPPIPADKPAPAPAPAPEEKKEEKKEEPAPVPAPAADEPAKATLTDSDAPAKAEEPAVEEEAPKLIKPKPIMGMGMMGGMGKSIAEMAAAKKLQKQQTVDSDSGSTASAAEDSAPATPTTPTPKKIPIVLPKPKPRLSEEALAETAAASGSDAEESKRPTRPSRPLPGPATSLDMNAPQLEAQKAVAEMLAAKRKKAEEAEAASASAGEEKKDDGDDSKQPLRPTRKLPIPLPKKDEAKKEEPAAADEPASSPTVPKRPPRKDLPQPKPMNDDDAI* # PASA_UPDATE: g7713.t1, single gene model update, valid-1, status:[pasa:asmbl_8623,status:12], valid-1 NODE_63_length_47234_cov_41.3691 . gene 14907 28758 . + . ID=g7713;Name=g7713.t1 NODE_63_length_47234_cov_41.3691 . mRNA 14907 28758 . + . ID=g7713.t1;Parent=g7713;Name=g7713.t1 NODE_63_length_47234_cov_41.3691 . exon 14907 15043 . + . ID=g7713.t1.exon1;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . CDS 14907 15043 . + 0 ID=cds.g7713.t1;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . exon 15164 15533 . + . ID=g7713.t1.exon2;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . CDS 15164 15533 . + 1 ID=cds.g7713.t1;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . exon 15683 28758 . + . ID=g7713.t1.exon3;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . CDS 15683 28594 . + 0 ID=cds.g7713.t1;Parent=g7713.t1 NODE_63_length_47234_cov_41.3691 . three_prime_UTR 28595 28758 . + . ID=g7713.t1.utr3p1;Parent=g7713.t1 #PROT g7713.t1 g7713 MANEGDAGRDGDWEDPRVGFLERFYLKSTKLKDDKWKKMLSIEDNKLMIINFLEKADHGFILFAQNARDDIVPSFDPPASLKKKSVYFVKRKLDQQEPLKAATMKRDLIYGDLSYSPLEHLSAVVDDVYLPMLMNQRNHTKWPAVVAQDVLRHIHRLKSSVYVVAGQVKGKTLLPLPVGTESDTNIDKNLVHAIESAIIDWTHQIRDVLKSNSAAPLLEGHNPGPLVELDFWAAKAANLQCIYDQLRNDKIMKMAKVLEKSKSSYYPAFKRIFEEVVAALMEAKDINIHLKPLRPILERMNEAEDFKEMSALFGPLMHTLSLIWQHSKFYNTPTRLIVLLQEVCNEMIEHARSYLEPENIFKLEPDDAKDRVETTLSIFDAFYGVYHDYKARINQKSKESAAAAASSSNGATAEPTVRPWVFEDKMVFVRLEKFQDRIRKVLDFFATGLEFIKLEKVEIGGVKGKQLSNQLQQIFKEFESNWQAFSTRTYDPLDPNIPDFEDDFDVFSLKIRDLDRRLASVISQGFDDCAVVESVFKLFDSFAGLLDRQVIRADIEQKYTRLLSMFSGEMDDVKAIFNAQKTNPPVHKNQPTVAGSLSWSHELRNRIDGPMRKLKELKSDVLASAEAEAVSEKFNEMTACLNQFDDTIYNAWSETVGVESQKNLQRPLLVREGANLLTVNFDSQLVALLREVKYLESLGKGNIPQSAAAIFAKSETFRQYVGNLDLMVKQYNRIRETVIDVEAPLIESRLKAIDEQLKRGLSELNWNSEGIQEYIATTKGAVEELSQRLQKAKSNVEEIDVIMANWYKAPLIERAGKKGLLNVAEKEAKLAVRYDEIRAGGQRIHALLRESCTSLEATEGSSEWHAYAEYVDDLVVEGFFKTIHCSLLYLLQNMDAEFLKSNELPALMEARFELIPPHMIFTPSMDDDHDSSVMAIIETILRDVYRAATLVPRLASHSVLPDYSRDMDEMVDLTDMKSELLDSVNGVMNSCIEYRNSFDVYAYLWTDDRQDFLAQFLKYGKVPTPEEIEAAGEEGIKPTPPTLEQYKRQIDTYEKIYTKIQAMNGLAAFDGWFRVDAKPFKATLSNIVKKWSYMFIHHQMDHVTNTLSDLSKFIKDVTAGLSHPVVEGDLPGLVDVMGLLLAVRERTSNTDEIFEPLKQTVTLLKTYDVDMNEEVHNLLAELPDHWANLKKTATSIKHEVAPLQANEVAALMKKCAQFELRNFDFREHFTRSAPFKYDIPIPQAYRSLDRAHRQTTAMEEELKQLEQSASLFEVALPEYKQLRTCRKEISLLKVLWDMIGLVTYLFDDWRTTLWRAINVEAMELESKKFVKDIRALDKEVRAWDAFLGLDSTVKNMITSLRAVGELQNPAIRERHWQQLMHATKVKFSMSDETCLNDLLALNLHNFEDEVRSIVDRATKELSMEKILSELDKTWSQMEFDYEKHPRTGLSLIRSSEELVETLEDNQVVMQNLMTSKYVAHFLEQVSRWQRTLSTVDSVITIWFEVQRTWSHLESIFIGSEDIRNQLPEDSKRFDGIDSDWKELMGSAEKTPNVVEACCKKGLFEMLEGMQARLALCEKALAEYLETKRLAFPRFYFVSSTDLLDILSKGNQPEEVAKHLSKLFDNMAQLKFETDADGKTTKRALGMYSKEKEYVEFTEPCDCSGQVERWLSLLMKTMRATLRSILTEAVVTYEEKPREQWIFDYAGQISLAGTQIWWTTEVNIGFERLEEGYENALKEYYKKQVSQLTTLITMIQGEMTRNDRQKIMTVCTIDVHARDIVMKLIQEKAESAQAFSWQSQLRHRWDDEQRDCFANICDAQFRYWYEYLGNTPRLVITPLTDRCYITLTQSLHLVMGGAPAGPAGTGKTETTKDLGRALGMMVYVFNCSEQMDYKSCGDIYKGLAQTGAWGCFDEFNRISIEVLSVVAVQVKSITDGLRAKKKRFIFQGEEISLESTVGIFITMNPGYAGRTELPENIKALFRPCAMVVPDFELICEIMLMAEGFIEAKTLARKFVTLYGLNKELLSKQDHYDWGLRAIKSVLVVAGTLKRSEPDLPEENVLMRALRDFNLPKIVSDDVPVFMGLIGDLFPKVEVPRKRDLEFEDQIRVTVSELKLQPEDNFVLKVVQLDELLAVRHCVFVLGGAGTGKTQVWKTLAKTYTNMGRKAVVHDLDPKAVTNDELFGYINPATREWKDGLFSTIMREMASMSGDNPKWILLDGDIDPMWIESLNTVMDDNKVLTLASNERIPLVASMRLVFEIGHLKYATPATVSRAGILYLNPTDLGWNPFVQTWIDKREVQAEKANLTILFDKYLPSCLEKLRTGFKKITPMTDISMVQTLCYLLEGLLTEANVPLGCDKEWYEVYFVFAAVWAFGGAMFQDQLVDYRVEFSKWWQAEFRTIKYPSAGTVFDYCIDHETKKFVPWAERVNKYEHDPEMPLQSVLVATAETTRLRYFMDLLTDRRRPVLLVGNAGCGKTVLVQNKMSDLDDDTMVVNIPFNHYTTSAMLQGVLEKPLEKKAGRNYGPPGSKRLIYFIDDLNMPEVDAYGTVQPHTLMRQHLDYSHWYDRAKLSLKEIHNCQYIACMNPTAGSFTINPRLQRHFAVFAVSFPGIEALQQIYSNILAGHMQGFVPQVTKIGDKLVTAALAFHHKVSSVFLPTAVKFHYTFNLRDLSNIFQGMLFSTSANFKTPTELVRLWLHEASRVYGDKLIVNKDQEIFAQLQADTIKKYFDDMDMERLKEQPCIYCHFATGVGEPKYQAVEGWPRLKKILEEALDGYNEVNAAMNLVLFEDAMHHVCRINRILENPRGNALLVGVGGSGKQSLARLAAFISGLEVFQITLRKGYGIPDLKTDLAGLYTKAGLKNVGMVFMMTDSQVADERFLVLINDLLASGEIPELFPDDEVENIISSMRNEVKGVGLVDTRDNCWKYFISKVRRNLKVVLCFSPVGTILRVRCRKFPAIVNCTNIDWFHEWPEEALNSVSARFLEETELVPQGIKVSVSNFMAFVHRSVNEMSKKYLANERRYNYTTPKSFLEQIKLYKTLLDKKNAELIMKMDRLENGLTKLKSTAAQVDDLKQKLAAQEVELKEKNEEADKLIQKVAEDTEKVNREKAIADEEEIKVAAKTAAVKETQISCEADLARAEPALAAAQEALHTLNKANLTELKSFGQPPEAVKNVTAAVMVLMAPAGKIPKDRSWKAGKAMMAKVDQFLDALINFDKEHIDSSNLEALRPYLADEMFIPDLIRSKSLAAAGLCSWVINIVRFYEVYCDVEPKRQALSSANEELAVSQAKLAEIKGKIKELDDNLSELKAAFEHATSEKLRCEEEAQKTQLTLALANRLINGLASEKVRWAESVETFKQQEKTLPGDVLLVSAFVSYVGCFSKQYRLELMNEKWLPYLLEQEIRIPITEGLDPLVLLTDDAKIASWNNEGLPNDRVSVENATILTNAERWPLMIDPQLQGINWIKTREGAALRVVRAGQRGYLDIIEKAVSGGDCVLLENIGETLDPVLDALLGRNTIKKGRYIKIGDKEVEYSPNFRLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLADVVSRERPDLEKTKAELTKQQNDFKIKLKELEDSLLARLSAAEGNFLGDTALVENLETTKRTAAEIEVKVAEAKITELNINEARENYRPVAARSSLLYFILNDLYKINLMYQFSLKAFTTVFHKAIDRAQQSEELKERVENLIDSITYSVFVYTTRGLFERDKLIFTAQMAFSILQLKGEIVPDEFDFLLRCPAVLNVVSPVDFLSNANWGSIKSLSQMEAFRGLDKDIEGSAKRWKKFCESEVPEKEKFPQEWKNKTALQKLCMLRALRPDRMTYAVADYVEEKLGSKYTDSSHVEFSKSFEESDPCTPIFFILSPGVDPLKDVEVLGKLLGFTMDSGKFHNVSLGQGQEVVAEQKLDVAMREGHWVILQNIHLVAKWLPQLEKRLDQAYEGVHPDYRVFLSAEPASIPSAHVIPQGILQSSIKITNEPPTGMKANLHRALDNFNQETLESCAKEAEFKSILFSLCYFHAVVIERRKFGPQGWNRPYPFNVGDLTISVNVLFNYLEANPQVPWTDLRYLFGQIMYGGHITDDWDRRLCRTYLEEYMKPEQLDGDLEFAPGFSVPGNNDYRGYHTYIDEMLPPESPYLYGLHPNAEIGFLTMRANNLFQTILEMMPQDAQGGDGSGSTKEEKVKQCLDEVMEKLPDEFNMTELQARSEEKTPYVVVALQECERMNILTRELRRSLLELDLGLKGDLTISETMETLMNALFLDKVPDEWAKLAYPSTYGLAQWFADLLLRIKELESWVSDFNLPNCVWLSGLFNPQSFLTAIMQTTARKNEWPLDKMTLHCEVTKKNKEDINSPPRDGAYIYGLFMEGARWDTQTGMIQESRLKELTPSTPVMFIKAITVDKRDTKGVYDCPVYRTRQRGPTYVWSFNLKTKEKASKWIMAGVSLLLSI* # ORIGINAL: g7714.t1 original gene structure, not modified by PASA NODE_63_length_47234_cov_41.3691 AUGUSTUS gene 28882 30629 . - . ID=g7714;Name=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS mRNA 28882 30629 . - . ID=g7714.t1;Parent=g7714;Name=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 29877 30629 . - . ID=g7714.t1.exon1;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 29877 30629 . - 0 ID=cds.g7714.t1;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 29340 29741 . - . ID=g7714.t1.exon2;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 29340 29741 . - 0 ID=cds.g7714.t1;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 29104 29213 . - . ID=g7714.t1.exon3;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 29104 29213 . - 0 ID=cds.g7714.t1;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS exon 28882 28987 . - . ID=g7714.t1.exon4;Parent=g7714.t1 NODE_63_length_47234_cov_41.3691 AUGUSTUS CDS 28882 28987 . - 1 ID=cds.g7714.t1;Parent=g7714.t1 #PROT g7714.t1 g7714 MAVVRFSVRVALFFLGAVLYASPRVSAARERLYDQVKPYMLGGIVRSKYELPVTLNLIYDELKERVEKSHRLRSGEPFDDLFAEFAEKMQDTRNALPPPQWAAMATMIAQNFQRSGSDDRAMEFYRKAFDTDPTLIYARNRLATLLLRDGQAALAEEVFTDAVINGRTAQFDHISDSYVGLSVISMLANDTPEAIEMLRKALHHDHENQGAWQRLGQLYVSTNEANAAISCFENAILLNETDPTGYFNLAKAIVFRADSPDKAGTVVPTEKSSDAINGQQDAGSRANRPPNPPADYEDAERLYQEAIKLDREFGGAYMNLAHLLSREPTRLDEAIDVLVDGLDGGFSKDHRIHVSLATLLNKAKRLEEAAIHLESALKLEPRLLEARLTLTTYYERLEDYEKGIKNLDEALDYLDYVQDSYREVFVSNVARVRATLEAKAQKLKTGTSKAKGPFYG* # PASA_UPDATE: g11656.t1, single gene model update, valid-1, status:[pasa:asmbl_5772,status:12],[pasa:asmbl_5774,status:12], valid-1 NODE_3248_length_3919_cov_40.2354 . gene 360 1983 . + . ID=g11656;Name=g11656.t1 NODE_3248_length_3919_cov_40.2354 . mRNA 360 1983 . + . ID=g11656.t1;Parent=g11656;Name=g11656.t1 NODE_3248_length_3919_cov_40.2354 . exon 360 387 . + . ID=g11656.t1.exon1;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . CDS 360 387 . + 0 ID=cds.g11656.t1;Parent=g11656.t1;5_prime_partial=true NODE_3248_length_3919_cov_40.2354 . exon 561 649 . + . ID=g11656.t1.exon2;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . CDS 561 649 . + 2 ID=cds.g11656.t1;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . exon 855 951 . + . ID=g11656.t1.exon3;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . CDS 855 951 . + 0 ID=cds.g11656.t1;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . exon 1083 1201 . + . ID=g11656.t1.exon4;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . CDS 1083 1201 . + 2 ID=cds.g11656.t1;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . exon 1747 1983 . + . ID=g11656.t1.exon5;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . CDS 1747 1818 . + 0 ID=cds.g11656.t1;Parent=g11656.t1 NODE_3248_length_3919_cov_40.2354 . three_prime_UTR 1819 1983 . + . ID=g11656.t1.utr3p1;Parent=g11656.t1 #PROT g11656.t1 g11656 GYNLTDCGDHKDLFCNATLNLCAAVSKDNFVATVKDWSAVSTNETEMQAVLVANGPLSVALDASTLQFYKSGVWNPWLCSKSTLDHAVLITGYGTDSGKDYWTVKNSWGPKYFRIVRGVGKCGINTAVTTADVQ* # ORIGINAL: g11657.t1 original gene structure, not modified by PASA NODE_3248_length_3919_cov_40.2354 AUGUSTUS gene 2047 3218 . - . ID=g11657;Name=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS mRNA 2047 3218 . - . ID=g11657.t1;Parent=g11657;Name=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS exon 3080 3218 . - . ID=g11657.t1.exon1;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS CDS 3080 3218 . - 0 ID=cds.g11657.t1;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS exon 2784 2874 . - . ID=g11657.t1.exon2;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS CDS 2784 2874 . - 2 ID=cds.g11657.t1;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS exon 2535 2653 . - . ID=g11657.t1.exon3;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS CDS 2535 2653 . - 1 ID=cds.g11657.t1;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS exon 2047 2117 . - . ID=g11657.t1.exon4;Parent=g11657.t1 NODE_3248_length_3919_cov_40.2354 AUGUSTUS CDS 2047 2117 . - 2 ID=cds.g11657.t1;Parent=g11657.t1 #PROT g11657.t1 g11657 MGSSLLDRALPYWIGVVSVMALGNSVQCFLGHEWLVDKLYTLGSSQVTALSARTFGTWTGLASIVRIYAALDLHNKSLYDVTLLSFVLANAHFLGEVYVYKTAALELGVVLPLIISGTTMLWMLFARSRFVGVSSKRRD* # ORIGINAL: g5202.t1 original gene structure, not modified by PASA NODE_4167_length_2081_cov_44.0204 AUGUSTUS gene 2 994 . + . ID=g5202;Name=g5202.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS mRNA 2 994 . + . ID=g5202.t1;Parent=g5202;Name=g5202.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS exon 2 994 . + . ID=g5202.t1.exon1;Parent=g5202.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS CDS 2 994 . + 0 ID=cds.g5202.t1;Parent=g5202.t1 #PROT g5202.t1 g5202 VSVHTNPSASLDDPGTVGVLTKCACNVGSRAERCVLPAQYASLRPFVRVSAFCGLAPNVRIGKDVFCRKMMFALEGFAPGVISSAERAAAAHDLADHSAFVFPCYVLPEERERLRAMASSHAGEWPYIAGQKWIVKPSGRHSGQGMYFVDSVDSVLSAVDADGGSHGLADLDVTVALPLLHPPLLIDGYKFDMRVYAVVTSMSPLRVYVHDKGIGLFAGELYALNATGADMRATQLLTNILANQKVRSVQEVEWSFMRLRSHFESMGYDADALFSRVRSAVVRVFLAYESDLHFPLDGATTPDNSRGYAVFGVDVIIDERLQPRVMEVGF* # ORIGINAL: g5203.t1 original gene structure, not modified by PASA NODE_4167_length_2081_cov_44.0204 AUGUSTUS gene 1933 2081 . + . ID=g5203;Name=g5203.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS mRNA 1933 2081 . + . ID=g5203.t1;Parent=g5203;Name=g5203.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS exon 1933 2081 . + . ID=g5203.t1.exon1;Parent=g5203.t1 NODE_4167_length_2081_cov_44.0204 AUGUSTUS CDS 1933 2081 . + 0 ID=cds.g5203.t1;Parent=g5203.t1 #PROT g5203.t1 g5203 MAGDVLRIIYGDGGECAKKLHARLVALGVILVETGADHAVEQCEMTDGS # ORIGINAL: g6062.t1 original gene structure, not modified by PASA NODE_3043_length_4464_cov_42.5641 AUGUSTUS gene 2428 4195 . - . ID=g6062;Name=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS mRNA 2428 4195 . - . ID=g6062.t1;Parent=g6062;Name=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS exon 3531 4195 . - . ID=g6062.t1.exon1;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS CDS 3531 4195 . - 0 ID=cds.g6062.t1;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS exon 3238 3363 . - . ID=g6062.t1.exon2;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS CDS 3238 3363 . - 1 ID=cds.g6062.t1;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS exon 2765 2990 . - . ID=g6062.t1.exon3;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS CDS 2765 2990 . - 1 ID=cds.g6062.t1;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS exon 2428 2658 . - . ID=g6062.t1.exon4;Parent=g6062.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS CDS 2428 2658 . - 0 ID=cds.g6062.t1;Parent=g6062.t1 #PROT g6062.t1 g6062 MFRCRYVATDDMHTVKADVLVCPIRATHVSPINGHDVVECEPSLKEQFSAALRGRAAAETIARSRVASITPQKAKKAPFLFSALPGVGGATDSGDIGGGLDDAEAESAKEDTETEEGDDSDDGDDNEEDNDEEGETGVVLHDPKSGLGGIKGTVTDLINRGHWVPGQGHVPGGDLSESFMVYLQYLLSACADPDFVRMIDVEGDESYFKPAVGRIEMRVSDRKRFLVNTIAWNATFREAIEKYPSLTLRPAHKRTNCQACGRKNHPAAFTVVLSGRPYDSKRLRLAESPAKGRRRRPHTPDDDENEDENDDDGGHGGVHGHVDGDMFMCGSTCATRASVYHRLHHYRWRQYLSCKTKLDPVLGVLVNGTPSGGQRERDRASYEAIRRCLDDDAWANREFAAYNDMLDDTTGYAEI* # ORIGINAL: g6061.t1 original gene structure, not modified by PASA NODE_3043_length_4464_cov_42.5641 AUGUSTUS gene 864 2213 . + . ID=g6061;Name=g6061.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS mRNA 864 2213 . + . ID=g6061.t1;Parent=g6061;Name=g6061.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS exon 864 2213 . + . ID=g6061.t1.exon1;Parent=g6061.t1 NODE_3043_length_4464_cov_42.5641 AUGUSTUS CDS 864 2213 . + 0 ID=cds.g6061.t1;Parent=g6061.t1 #PROT g6061.t1 g6061 MAPRETNAIDTDGDESTQPPAQTSNNSKEDVVSADASVDAAIAWRGMDEQKAQPPPSATPILVTHASESHNPVFIGEMTLHDGNTATLQPLTSPMDCESTAAVVCPAPSDATQSATGTPTQCSAPDTQIAYTMAVTPHARQLALPNAVYIPPTPNAASVPSAVASVQPAVPSASSIPPTVPIAASVPVAVPNAASGPSGQSDPRRRKGATTRMMFAATPPPPSGSTGSRDINVHAHVQAAFDRERACTTAGGWMCGLPVEVKSANTAHVANAPPSMAVVRECGFRGTSRQAVELHLVQIHAHHVICLEGGCGRMFSQWTGFVVHASRMHVHGRDAAKKARDGCHNNASTHVSAPVPGIFINRKKGKAAEGDEQRHVTYARHVTCDEVTRFFQSCTLATRESDAPAPPRVSSLTSLRLPAASCLPYSLVWHAFVDAHEDGYVDDGEGAWS* # ORIGINAL: g6140.t1 original gene structure, not modified by PASA NODE_1936_length_8456_cov_39.4593 AUGUSTUS gene 325 1303 . + . ID=g6140;Name=g6140.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS mRNA 325 1303 . + . ID=g6140.t1;Parent=g6140;Name=g6140.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 325 498 . + . ID=g6140.t1.exon1;Parent=g6140.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 325 498 . + 0 ID=cds.g6140.t1;Parent=g6140.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 698 1303 . + . ID=g6140.t1.exon2;Parent=g6140.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 698 1303 . + 0 ID=cds.g6140.t1;Parent=g6140.t1 #PROT g6140.t1 g6140 MRMQKELADAVARSSAVEYELKRAGQEHQLEMERREGPLRRRVGDLEALGERLFAVEKELDDTRTELREARAQLQQHRNSAADLAIRLQEQETACERSNSEAKQLRDECRGLKERMDARRQEVEEISHRRAELSAEIAKKEALLRTAQSAIDVANKERESTERRLESALLDARSATNQLRDRLSEHEKTAAHLLAEKEKEVSLEKEMRAQVERLREESLRRCENRVLELQDKADSMASANRSLQQYIKTVKTSYNSSFI* # ORIGINAL: g6141.t1 original gene structure, not modified by PASA NODE_1936_length_8456_cov_39.4593 AUGUSTUS gene 1664 4467 . - . ID=g6141;Name=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS mRNA 1664 4467 . - . ID=g6141.t1;Parent=g6141;Name=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 4303 4467 . - . ID=g6141.t1.exon1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 4303 4467 . - 0 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 3951 4005 . - . ID=g6141.t1.exon2;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 3951 4005 . - 0 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 3506 3619 . - . ID=g6141.t1.exon3;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 3506 3619 . - 2 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 3200 3333 . - . ID=g6141.t1.exon4;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 3200 3333 . - 2 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 2754 2939 . - . ID=g6141.t1.exon5;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 2754 2939 . - 0 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 2472 2578 . - . ID=g6141.t1.exon6;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 2472 2578 . - 0 ID=cds.g6141.t1;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 1664 1967 . - . ID=g6141.t1.exon7;Parent=g6141.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 1664 1967 . - 1 ID=cds.g6141.t1;Parent=g6141.t1 #PROT g6141.t1 g6141 MAAPQQEGKGKLFTKMVSKGFSRVVQYTEEKMGTAEVTELDWRFEALEQRVDKTKLHLEKMIKGAEGYMHPGLSQKIEQLVTRDKKETTSYERLGATFIEAGEAFGQDTSYGGALIKCGKVEQDIGIEWGKTVLDTQLQFVAPNLAFLDGELKNIMRQRKKFATARLDLDACKTTIRKTNVTSEKLSQAEAELHAAQREFDQQYRETERMLSALAHEHDEQLRRLLAFMEAQLRFFSKGYGLVQTAVDELKASVPALATATTGQSSSIAAVNAPQDRGVAKRLSEATLATPKVRFARVIMNHVAADPTELSARPGDIVTVLNWREGDEFADVELSGTKGRLSVAFMEMLKTADS* # ORIGINAL: g6142.t1 original gene structure, not modified by PASA NODE_1936_length_8456_cov_39.4593 AUGUSTUS gene 5170 8258 . + . ID=g6142;Name=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS mRNA 5170 8258 . + . ID=g6142.t1;Parent=g6142;Name=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 5170 5533 . + . ID=g6142.t1.exon1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 5170 5533 . + 0 ID=cds.g6142.t1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 5692 6303 . + . ID=g6142.t1.exon2;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 5692 6303 . + 2 ID=cds.g6142.t1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 6595 6707 . + . ID=g6142.t1.exon3;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 6595 6707 . + 2 ID=cds.g6142.t1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 7113 7205 . + . ID=g6142.t1.exon4;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 7113 7205 . + 0 ID=cds.g6142.t1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 7397 7831 . + . ID=g6142.t1.exon5;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 7397 7831 . + 0 ID=cds.g6142.t1;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS exon 8103 8258 . + . ID=g6142.t1.exon6;Parent=g6142.t1 NODE_1936_length_8456_cov_39.4593 AUGUSTUS CDS 8103 8258 . + 0 ID=cds.g6142.t1;Parent=g6142.t1 #PROT g6142.t1 g6142 MDAADVLQEAALHASDVSAALTSVTFNVRVSCTENEYVCVVGSCEGLGSWDALVAPRLHRGADPAVWTATVPLSSAVKIDYKYVVCEDIVDRTGEKSGGGSVRRVIHRWETVIGNRHCLAAGETNVRDDGEFGIFGVGTVQVDEGWLTQEKELHVRLGNTINRSPVKMHAHDGGIRVKLTPIDLTSGSESDARSVGLRVLRLAPGGADSPIGLPHHAPVLQQSSGTRFVDGDIFVFSFRAVTFASTAFAIDVFADGGEGNGVRLGRGVIVPSQLPLSLGEITAPVVSADGLPVGEVLADCLVCKPLRYKNNDMSSVWASYWNKSRGALDVGHRGLGNSQENAAYKRAPITENTIMSLSTAARHGADFVEFDVQLTKDLVPVIYHNFKICATLQKRNLPGSELYEVDVRDLTLVQLRRLQLESSHRKTKMFSKLLRERRQSILALGKPHSPPHDAFGDSPPHAADGVSGHANDSMSGHGARHVETDRAREERRRERERDLRASAHVHTADEEADEIALHEFPTLREVFETVPAHVGFNIEIKFPVTDSTEANRRPYWDHNTYVDNILRTIFDHAGTRRIVISCFDPDICTL* # PASA_UPDATE: g13941.t1, single gene model update, valid-1, status:[pasa:asmbl_6457,status:12], valid-1 NODE_3723_length_2888_cov_40.363 . gene 140 1835 . - . ID=g13941;Name=g13941.t1 NODE_3723_length_2888_cov_40.363 . mRNA 140 1835 . - . ID=g13941.t1;Parent=g13941;Name=g13941.t1 NODE_3723_length_2888_cov_40.363 . five_prime_UTR 1606 1835 . - . ID=g13941.t1.utr5p1;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . exon 1520 1835 . - . ID=g13941.t1.exon1;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . CDS 1520 1605 . - 0 ID=cds.g13941.t1;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . exon 893 1314 . - . ID=g13941.t1.exon2;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . CDS 893 1314 . - 1 ID=cds.g13941.t1;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . exon 567 685 . - . ID=g13941.t1.exon3;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . CDS 567 685 . - 2 ID=cds.g13941.t1;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . exon 140 269 . - . ID=g13941.t1.exon4;Parent=g13941.t1 NODE_3723_length_2888_cov_40.363 . CDS 140 269 . - 0 ID=cds.g13941.t1;Parent=g13941.t1;3_prime_partial=true #PROT g13941.t1 g13941 MADSESDNEDFYDAEENIASSPKQSAAEPEHDEHNVTLLTEEADVAGNARRTSGPAAAQAPTEASTTAAPSAVASSADVSVATASTARVPPPRPRPPPPTASAVAAAASAPSNPTHEQPALAHAPVDSAVKAPPRRPPPPKQGSLSSSTGTAPPNAHAHASAPTATVHADGGASAPVAPPRRKKKADDFVESPAHSKSDEAQASVGDGKGEQVKIADSETESAMFVSDMIRKMGPDAAKGSSPQATPVVFDR # ORIGINAL: g5993.t1 original gene structure, not modified by PASA NODE_5643_length_769_cov_36.7767 AUGUSTUS gene 105 711 . + . ID=g5993;Name=g5993.t1 NODE_5643_length_769_cov_36.7767 AUGUSTUS mRNA 105 711 . + . ID=g5993.t1;Parent=g5993;Name=g5993.t1 NODE_5643_length_769_cov_36.7767 AUGUSTUS exon 105 711 . + . ID=g5993.t1.exon1;Parent=g5993.t1 NODE_5643_length_769_cov_36.7767 AUGUSTUS CDS 105 711 . + 1 ID=cds.g5993.t1;Parent=g5993.t1 #PROT g5993.t1 g5993 SKATGQLGGLHNPIGLLARLDALLADDAILVADGGDFVGTAAYVVRPRGPLQWLDPGAFGTLGVGGGFALGAKLCRPDSDVWIIYGDGSCGYSVAEFDTYARHNTPVIALVGNDACWSQIAREQVPMFKTDVACALRYTDYQTVAEGFGGRGIVLKGSESVAEVDAAFRRAVELSRGAKGLPVLVNAMIGKSDFREGSISV* # PASA_UPDATE: g13433.t1, single gene model update, valid-1, status:[pasa:asmbl_7605,status:12], valid-1 NODE_4788_length_1246_cov_33.2357 . gene 96 1163 . - . ID=g13433;Name=g13433.t1 NODE_4788_length_1246_cov_33.2357 . mRNA 96 1163 . - . ID=g13433.t1;Parent=g13433;Name=g13433.t1 NODE_4788_length_1246_cov_33.2357 . exon 999 1163 . - . ID=g13433.t1.exon1;Parent=g13433.t1 NODE_4788_length_1246_cov_33.2357 . CDS 999 1163 . - 0 ID=cds.g13433.t1;Parent=g13433.t1 NODE_4788_length_1246_cov_33.2357 . exon 547 756 . - . ID=g13433.t1.exon2;Parent=g13433.t1 NODE_4788_length_1246_cov_33.2357 . CDS 547 756 . - 0 ID=cds.g13433.t1;Parent=g13433.t1 NODE_4788_length_1246_cov_33.2357 . exon 96 256 . - . ID=g13433.t1.exon3;Parent=g13433.t1 NODE_4788_length_1246_cov_33.2357 . CDS 96 256 . - 0 ID=cds.g13433.t1;Parent=g13433.t1;3_prime_partial=true #PROT g13433.t1 g13433 MQVTKRPVTAGTAFKTSMNELVENLMKKEPHYVRCIKPNDKKTPGTFDKERVLHQVRYLGLLENLRVRRAGFAYRLPFDGFILRYKMLSKETWPNYKGKQLKSGAEAILKEFKITPPAVEFGKTKVFIRAPQTLFTLEEKRQAALPRIVLILQRTWRGYHARRLVKRLRAAVTIKRFF # ORIGINAL: g9593.t1 original gene structure, not modified by PASA NODE_2931_length_4711_cov_41.4855 AUGUSTUS gene 121 2534 . - . ID=g9593;Name=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS mRNA 121 2534 . - . ID=g9593.t1;Parent=g9593;Name=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS exon 2446 2534 . - . ID=g9593.t1.exon1;Parent=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS CDS 2446 2534 . - 0 ID=cds.g9593.t1;Parent=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS exon 476 2041 . - . ID=g9593.t1.exon2;Parent=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS CDS 476 2041 . - 1 ID=cds.g9593.t1;Parent=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS exon 121 223 . - . ID=g9593.t1.exon3;Parent=g9593.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS CDS 121 223 . - 1 ID=cds.g9593.t1;Parent=g9593.t1 #PROT g9593.t1 g9593 MADFDVEALLEAPFNEKKVEDASAVPVTHGEIAKNVNGDAANGDEHERPTDASSGAPKTAISTDEQSGTKEGERRGSRSGSRDRRDRDRSRDRRDRSRSRDRRDRDRGDRGDRDRDRDRDRRRRSRSPDRRSRHASYDDRRDGRDGRDRRDIRDGRGDGRGDWGGDRGGDRGGDRGGDRGGRGGNNARGREKSPSGDQLPPGAATDQEERAARTVFVLQLPSNVREADLETFFADVGKVRKVTFPADRGARRSKGVAYVEFFDLESVPKAIALTGQRRLNNAPVIVQESRSDRNRTVMEIVAPATAANLAQARIYVGSLHFTMNERDVRSIFEPFGEIVSVSLAKDDQGQFKGFGHVQFRLPASAKKAIEQLDGFLLAGRNIKVQLAHELNNPHVAASLGTTTAPGGGASQQPTHSEGGLAAGLAQFQQQNAQNAYSSTTSAATTSNATGTATVPTQPLQPMQPMQPMPHGMVMTPHGMMMMSRPPMMPMMPMHMPPFVPGMPVGLPLHPPGHGLHPGAPGMHPGVLQGAPMVSMVQPSPYLLLKNMFDPARETDPDWQLNIRDDVLDECSKCGDVFHIHVDPNSQ # ORIGINAL: g9594.t1 original gene structure, not modified by PASA NODE_2931_length_4711_cov_41.4855 AUGUSTUS gene 3060 4547 . + . ID=g9594;Name=g9594.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS mRNA 3060 4547 . + . ID=g9594.t1;Parent=g9594;Name=g9594.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS exon 3060 4547 . + . ID=g9594.t1.exon1;Parent=g9594.t1 NODE_2931_length_4711_cov_41.4855 AUGUSTUS CDS 3060 4547 . + 0 ID=cds.g9594.t1;Parent=g9594.t1 #PROT g9594.t1 g9594 MYRTSTLSTHASTRGSVSDAAPAMNVLVYTGDGTSEAAVEQAMTCLASFIGHRYDIRRIADAKTFACEPWEESTALVVVPGGRDLPYCRDFGAALAGLPSGSAAQRVAAYVQGGGKYLGLCAGAYFACRHIEFAKGDPAYVVVGGRPLSFFPGVAVGPSYGGFKYNSEEGARAVLLSRDDTCVLGPPAEDTVAAPQIAAYFNGGCHFIPDEGSDSGAYTVLARYAAGGIAAADGSVTTGNDGRIAAVECRHGQGLAVLSGVHIEYSPLLMDASDPNLAHILPSLAASDAARRVFVHGILSRMGLSPSANGPWNAPTATQTSFHDDGEDGVRLRHLLLACSNQPLLDRVAGSLAVVAPDEAARPRVWLSAESEPSTPASEESVGVIPTSWNYAAAFSSPECMGMSPGLPHALPSWLSGHPQVTDPEAPIASTNSSHNAKFAPRFDFPAYFSMLEPMAVGKTLMYGEVVTSTQDILERYALSMCLVWNWNTSYISLH* # PASA_UPDATE: g10385.t1, single gene model update, valid-1, status:[pasa:asmbl_5686,status:12], valid-1 NODE_3188_length_4058_cov_37.0906 . gene 972 4033 . - . ID=g10385;Name=g10385.t1 NODE_3188_length_4058_cov_37.0906 . mRNA 972 4033 . - . ID=g10385.t1;Parent=g10385;Name=g10385.t1 NODE_3188_length_4058_cov_37.0906 . five_prime_UTR 4033 4033 . - . ID=g10385.t1.utr5p1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . exon 3891 4033 . - . ID=g10385.t1.exon1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 3891 4032 . - 0 ID=cds.g10385.t1;Parent=g10385.t1;5_prime_partial=true NODE_3188_length_4058_cov_37.0906 . exon 3146 3621 . - . ID=g10385.t1.exon2;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 3146 3621 . - 2 ID=cds.g10385.t1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . exon 2533 2760 . - . ID=g10385.t1.exon3;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 2533 2760 . - 0 ID=cds.g10385.t1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . exon 2137 2267 . - . ID=g10385.t1.exon4;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 2137 2267 . - 0 ID=cds.g10385.t1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . exon 1568 1742 . - . ID=g10385.t1.exon5;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 1568 1742 . - 1 ID=cds.g10385.t1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . exon 972 1375 . - . ID=g10385.t1.exon6;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . CDS 1241 1375 . - 0 ID=cds.g10385.t1;Parent=g10385.t1 NODE_3188_length_4058_cov_37.0906 . three_prime_UTR 972 1240 . - . ID=g10385.t1.utr3p1;Parent=g10385.t1 #PROT g10385.t1 g10385 QVLYRGDAGPRYPDRVARIFSPQLQRPKFAAKIFHFEFDSRNCDYYTEIDAIEVIGLHTPPPATQPYAPAPTLAQADASPMNEIAQLSEGLSFADLPIDIARHIFSFLNHRELCRVSRTCAFMRSLAYDTISWADTDLQPYSFGISDESFANLVETRLDAFALKRLSLSWLNITSVAFVSAMRLVGNNLRCLRLACCPLVDWLSLLALPEYCRHLEELDLQGAVCPSDSFLALSPLPLRRLNLYRTSVNTMTLVTLLPQLPLLQHLNIGQCAAVDDCTQVAVTIAESCPDIRSLDFWRLSSLDYSGINAIANSCPRLEELDCGWCGRIDANSGCLANLARSCPNLKKVFLTAVRNTRAEDIESLAQHCKGLRQLDILGCKSGARAIAKVFQNCPDLEFIDLSFCGVESSDIDNWRASYPAIAVKSSFT* # PASA_UPDATE: g11637.t1, single gene model update, valid-1, status:[pasa:asmbl_6712,status:12], valid-1 NODE_3906_length_2533_cov_38.2681 . gene 168 1022 . - . ID=g11637;Name=g11637.t1 NODE_3906_length_2533_cov_38.2681 . mRNA 168 1022 . - . ID=g11637.t1;Parent=g11637;Name=g11637.t1 NODE_3906_length_2533_cov_38.2681 . five_prime_UTR 943 1022 . - . ID=g11637.t1.utr5p1;Parent=g11637.t1 NODE_3906_length_2533_cov_38.2681 . exon 817 1022 . - . ID=g11637.t1.exon1;Parent=g11637.t1 NODE_3906_length_2533_cov_38.2681 . CDS 817 942 . - 0 ID=cds.g11637.t1;Parent=g11637.t1 NODE_3906_length_2533_cov_38.2681 . exon 168 549 . - . ID=g11637.t1.exon2;Parent=g11637.t1 NODE_3906_length_2533_cov_38.2681 . CDS 168 549 . - 0 ID=cds.g11637.t1;Parent=g11637.t1;3_prime_partial=true #PROT g11637.t1 g11637 MRVVLDTDGGMDDAIALAMLLRAPGVHVAAITTVDGNVNVNQVNVNVLKVLEYFGRRDIPVFTGASGPLMGERTVDTWPGHGHDGLGGTGAFADPLMSVEPEGTAAEALVRLAADGGEPITLIAIGPLTNVAIATRLDRAFLGRLQSLVVMGGSVHAKGQGNLAAEYNV # ORIGINAL: g8115.t1 original gene structure, not modified by PASA NODE_7006_length_481_cov_55.0714 AUGUSTUS gene 2 481 . + . ID=g8115;Name=g8115.t1 NODE_7006_length_481_cov_55.0714 AUGUSTUS mRNA 2 481 . + . ID=g8115.t1;Parent=g8115;Name=g8115.t1 NODE_7006_length_481_cov_55.0714 AUGUSTUS exon 2 481 . + . ID=g8115.t1.exon1;Parent=g8115.t1 NODE_7006_length_481_cov_55.0714 AUGUSTUS CDS 2 481 . + 0 ID=cds.g8115.t1;Parent=g8115.t1 #PROT g8115.t1 g8115 TAGILNTTVSQTFVTTSINQLQDIGRVEFDLYGNNKAGNSTKIGKVTVDDFQIIQGFNQLQNVKVDLIQGTNNTDAVEAIRILLGNYNTGKPTNLIIQGPTACASPFFLNTATLPAVLNGADMHTLAVAANINLQSVLGGGVYLTAYNPYNLPVTQTKMD # PASA_UPDATE: g12166.t1, single gene model update, valid-1, status:[pasa:asmbl_7711,status:12], valid-1 NODE_4908_length_1148_cov_25.4874 . gene 94 1131 . - . ID=g12166;Name=g12166.t1 NODE_4908_length_1148_cov_25.4874 . mRNA 94 1131 . - . ID=g12166.t1;Parent=g12166;Name=g12166.t1 NODE_4908_length_1148_cov_25.4874 . five_prime_UTR 892 1131 . - . ID=g12166.t1.utr5p1;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . exon 781 1131 . - . ID=g12166.t1.exon1;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . CDS 781 891 . - 0 ID=cds.g12166.t1;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . exon 464 639 . - . ID=g12166.t1.exon2;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . CDS 464 639 . - 0 ID=cds.g12166.t1;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . exon 94 197 . - . ID=g12166.t1.exon3;Parent=g12166.t1 NODE_4908_length_1148_cov_25.4874 . CDS 94 197 . - 1 ID=cds.g12166.t1;Parent=g12166.t1;3_prime_partial=true #PROT g12166.t1 g12166 MPSVMKKIAETYKIGKTIGEGAFSKVKVAVHRVTGEKVAVKIISKARLKSKKSGAVSGSYLSHLSKDVRLLQLLEHPNIIRLYQVIETDEEFYIFMQFAGGGEIIDYISKKGRLSEKDARFFFRQIVSAM # PASA_UPDATE: g8727.t1, single gene model update, valid-1, status:[pasa:asmbl_7525,status:12], valid-1 NODE_4681_length_1335_cov_89.9135 . gene 1 1335 . - . ID=g8727;Name=g8727.t1 NODE_4681_length_1335_cov_89.9135 . mRNA 1 1335 . - . ID=g8727.t1;Parent=g8727;Name=g8727.t1 NODE_4681_length_1335_cov_89.9135 . five_prime_UTR 1335 1335 . - . ID=g8727.t1.utr5p1;Parent=g8727.t1 NODE_4681_length_1335_cov_89.9135 . exon 288 1335 . - . ID=g8727.t1.exon1;Parent=g8727.t1 NODE_4681_length_1335_cov_89.9135 . CDS 288 1334 . - 0 ID=cds.g8727.t1;Parent=g8727.t1;5_prime_partial=true NODE_4681_length_1335_cov_89.9135 . exon 1 203 . - . ID=g8727.t1.exon2;Parent=g8727.t1 NODE_4681_length_1335_cov_89.9135 . CDS 1 203 . - 0 ID=cds.g8727.t1;Parent=g8727.t1;3_prime_partial=true #PROT g8727.t1 g8727 DVKPTNLCYAIYTSGSTGKPKGVMLEHRGVVNFLLAMTDKPGLSAGDVCFAVTTICFDISVLELFLPLVVGAKVVIIGADTKMDAIALKKLLETHKPNMFQATPSTYRMLIEAGWAGAQNIKLLVGGEPLPISLGNQLRGMCKELWNMYGPTEATVWCTVRLMSEEIASIASIGKPIRNTTCYILDKDTKEPVALGKQGVLWVGGVQLARGYKNREALTAEKFIPDPFSKVPNAKMYDTGDLAKFLENGEILCCGRADYQVKINGYRIELGEIEACLDLHADLKANVVIVYSDPVSQDQRLVAYVVGKKEGEAPPIQELQEHVAKRLPKYMVPSVFVELDKLPLLPNGKVNRAGLPSPGEAKAEITQTVVVSPETEVEKKLVRMCEDLLGVSPIGVTTNLFTIGGNSLFALRLRNK # ORIGINAL: g2939.t1 original gene structure, not modified by PASA NODE_20187_length_151_cov_17.2368_potentialcontaminant AUGUSTUS gene 1 151 . - . ID=g2939;Name=g2939.t1 NODE_20187_length_151_cov_17.2368_potentialcontaminant AUGUSTUS mRNA 1 151 . - . ID=g2939.t1;Parent=g2939;Name=g2939.t1 NODE_20187_length_151_cov_17.2368_potentialcontaminant AUGUSTUS exon 1 151 . - . ID=g2939.t1.exon1;Parent=g2939.t1 NODE_20187_length_151_cov_17.2368_potentialcontaminant AUGUSTUS CDS 1 151 . - 1 ID=cds.g2939.t1;Parent=g2939.t1 #PROT g2939.t1 g2939 HIVSLDPVTHQPLSVETRVFPDTEFIAVTVYQNDSIRHLKKTSNPRAYKA # ORIGINAL: g3502.t1 original gene structure, not modified by PASA NODE_210_length_31436_cov_41.0866 AUGUSTUS gene 25996 26747 . - . ID=g3502;Name=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS mRNA 25996 26747 . - . ID=g3502.t1;Parent=g3502;Name=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 26633 26747 . - . ID=g3502.t1.exon1;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 26633 26747 . - 0 ID=cds.g3502.t1;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 26417 26541 . - . ID=g3502.t1.exon2;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 26417 26541 . - 2 ID=cds.g3502.t1;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 26245 26317 . - . ID=g3502.t1.exon3;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 26245 26317 . - 0 ID=cds.g3502.t1;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 25996 26138 . - . ID=g3502.t1.exon4;Parent=g3502.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 25996 26138 . - 2 ID=cds.g3502.t1;Parent=g3502.t1 #PROT g3502.t1 g3502 MSVFRALVDRLVRSASGTRRVFAGADLDGNKYFQLHHKGRSPTRVVEVPGAVPGDYEPNILPVEWESWLRGRRQQAPTIEELQAGIARRAVMKQRVSELAAKEYAAIEAERAGRDLPPQPPPSREDAPSPLPVVDREFEPESWQPTAAPKP* # ORIGINAL: g3500.t1 original gene structure, not modified by PASA NODE_210_length_31436_cov_41.0866 AUGUSTUS gene 19992 23357 . + . ID=g3500;Name=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS mRNA 19992 23357 . + . ID=g3500.t1;Parent=g3500;Name=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 19992 20388 . + . ID=g3500.t1.exon1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 19992 20388 . + 0 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 20480 20622 . + . ID=g3500.t1.exon2;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 20480 20622 . + 2 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 20760 20889 . + . ID=g3500.t1.exon3;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 20760 20889 . + 0 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 20991 21193 . + . ID=g3500.t1.exon4;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 20991 21193 . + 2 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 21345 21443 . + . ID=g3500.t1.exon5;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 21345 21443 . + 0 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 21571 21632 . + . ID=g3500.t1.exon6;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 21571 21632 . + 0 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 21818 21868 . + . ID=g3500.t1.exon7;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 21818 21868 . + 1 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 21988 22156 . + . ID=g3500.t1.exon8;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 21988 22156 . + 1 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 22300 22493 . + . ID=g3500.t1.exon9;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 22300 22493 . + 0 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 22729 22938 . + . ID=g3500.t1.exon10;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 22729 22938 . + 1 ID=cds.g3500.t1;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 23168 23357 . + . ID=g3500.t1.exon11;Parent=g3500.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 23168 23357 . + 1 ID=cds.g3500.t1;Parent=g3500.t1 #PROT g3500.t1 g3500 MSDGAAAQGLWGWGASLFGNASNGSTPQASTAVAGGSASGGEEGVQGLHSGGSGAGGRGSSHGGTLPRDARARVRRDSGAGGSTGSAGNSWRDPLAFGGGGDAYTDSHSDGYADHLNADPDGGDDHRSPYAAADTSEESSVTTERSSVVPSAIVPLAAMQFFSAAMLALWDNIMGPRLFRAWVSSDSVSEDVLAYVARHTLNGEICRSDDMGIEPKFYVLSEIGYVVSATIFSASAGQGRDDSPSIFSLSLVLPIDRLHAYLALHDFCEDATCDLVRRFQSALAKVSCAVSTPHTAVKQFESHLSAFAANANAIALADVPPNIEVSRTVFMPGNDGVFEPSFLRRRAAAPWSSVRTPGSLICITAFGATLLTPALLIRVQMISTLALFSSAEERRRSRYSRDGAESYCAGFYLQGIVVPTGNVALAESAVIRSMLPTTVVDLAAMSVQQTNQHNEYTVLRTEHRDALSRATAEGPVASPWAASTRRNSLFRTVRESAAMVRAALSEAFRLQPPPLRAIHIAQFHRLVSRKAVALIRNVDAELWVPIEYDVGWSVHGRPLIEASTKRVRADLGLLSDPDFRVVLACAERLRPGIFMDVFGDPRSMEDKLMLMMETF* # PASA_UPDATE: g3504.t1, single gene model update, valid-1, status:[pasa:asmbl_3547,status:12],[pasa:asmbl_3549,status:12], valid-1 NODE_210_length_31436_cov_41.0866 . gene 29894 31348 . - . ID=g3504;Name=g3504.t1 NODE_210_length_31436_cov_41.0866 . mRNA 29894 31348 . - . ID=g3504.t1;Parent=g3504;Name=g3504.t1 NODE_210_length_31436_cov_41.0866 . five_prime_UTR 31347 31348 . - . ID=g3504.t1.utr5p1;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . exon 30839 31348 . - . ID=g3504.t1.exon1;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . CDS 30839 31346 . - 0 ID=cds.g3504.t1;Parent=g3504.t1;5_prime_partial=true NODE_210_length_31436_cov_41.0866 . exon 30380 30723 . - . ID=g3504.t1.exon2;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . CDS 30380 30723 . - 2 ID=cds.g3504.t1;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . exon 29894 30230 . - . ID=g3504.t1.exon3;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . CDS 30048 30230 . - 0 ID=cds.g3504.t1;Parent=g3504.t1 NODE_210_length_31436_cov_41.0866 . three_prime_UTR 29894 30047 . - . ID=g3504.t1.utr3p1;Parent=g3504.t1 #PROT g3504.t1 g3504 HWKSTKHRGAFQVNADGTISSYYYKVTIPTTTTAIISIKQSEKSLFTGNVDVAAYLVGDAKADHELVAYSASKVGEDSTFKVKLKAGKYLLLPFTTGCRLRKRTDDFPTARIAGRDSKKLTNECKSAVTEVFERADLDMNGRLNRDEFDLLQLRTTGEKCDDETWDYMMEKFENKDGEITKQGFIDLYSLMLEMEGEEAVLKDLQMLGFNSALGLDEACPFVLRVHCEKGQPDISVIGEPDADVLTQAILRGAQLDGAKKTLSDGAVLYAQEQELRTTLVVANEKKHKISVTLDCSQSRNCVSHRGSLKLVTSLAPGQTKLGHHLLREKKGEWSVKCKETVAVK* # PASA_UPDATE: g3497.t1, single gene model update, valid-1, status:[pasa:asmbl_3543,status:12], valid-1 NODE_210_length_31436_cov_41.0866 . gene 3983 12729 . - . ID=g3497;Name=g3497.t1 NODE_210_length_31436_cov_41.0866 . mRNA 3983 12729 . - . ID=g3497.t1;Parent=g3497;Name=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 12675 12729 . - . ID=g3497.t1.exon1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 12675 12729 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 12364 12535 . - . ID=g3497.t1.exon2;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 12364 12535 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 12169 12269 . - . ID=g3497.t1.exon3;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 12169 12269 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 11910 12020 . - . ID=g3497.t1.exon4;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 11910 12020 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 11709 11783 . - . ID=g3497.t1.exon5;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 11709 11783 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 11340 11605 . - . ID=g3497.t1.exon6;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 11340 11605 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 11035 11236 . - . ID=g3497.t1.exon7;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 11035 11236 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 10708 10880 . - . ID=g3497.t1.exon8;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 10708 10880 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 10532 10612 . - . ID=g3497.t1.exon9;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 10532 10612 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 10340 10440 . - . ID=g3497.t1.exon10;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 10340 10440 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 9959 10183 . - . ID=g3497.t1.exon11;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 9959 10183 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 9726 9858 . - . ID=g3497.t1.exon12;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 9726 9858 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 9363 9572 . - . ID=g3497.t1.exon13;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 9363 9572 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 9057 9229 . - . ID=g3497.t1.exon14;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 9057 9229 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 8756 8972 . - . ID=g3497.t1.exon15;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 8756 8972 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 8491 8637 . - . ID=g3497.t1.exon16;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 8491 8637 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 8233 8367 . - . ID=g3497.t1.exon17;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 8233 8367 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 7959 8114 . - . ID=g3497.t1.exon18;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 7959 8114 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 7563 7820 . - . ID=g3497.t1.exon19;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 7563 7820 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 7310 7444 . - . ID=g3497.t1.exon20;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 7310 7444 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 7131 7224 . - . ID=g3497.t1.exon21;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 7131 7224 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 6917 7051 . - . ID=g3497.t1.exon22;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 6917 7051 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 6735 6781 . - . ID=g3497.t1.exon23;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 6735 6781 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 6520 6610 . - . ID=g3497.t1.exon24;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 6520 6610 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 6239 6415 . - . ID=g3497.t1.exon25;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 6239 6415 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 6050 6113 . - . ID=g3497.t1.exon26;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 6050 6113 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 5817 5952 . - . ID=g3497.t1.exon27;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 5817 5952 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 5349 5615 . - . ID=g3497.t1.exon28;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 5349 5615 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 5099 5264 . - . ID=g3497.t1.exon29;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 5099 5264 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 4877 4982 . - . ID=g3497.t1.exon30;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 4877 4982 . - 2 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 4654 4774 . - . ID=g3497.t1.exon31;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 4654 4774 . - 1 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 4318 4548 . - . ID=g3497.t1.exon32;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 4318 4548 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . exon 3983 4233 . - . ID=g3497.t1.exon33;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . CDS 4150 4233 . - 0 ID=cds.g3497.t1;Parent=g3497.t1 NODE_210_length_31436_cov_41.0866 . three_prime_UTR 3983 4149 . - . ID=g3497.t1.utr3p1;Parent=g3497.t1 #PROT g3497.t1 g3497 MDGLCRATCLSGVVPTTSVIFGIPLGGVDGGLGLREHALVFSSIANPETVALSIPPKTLEVAQQLFNRSIGALGPLSLNASGRVLGQQKGRQSLSVVGTFQWTADAVTSAPLLTSNSTGSAHPKRKRSMSAKEGALHQPASVLADADKAKTPNKRRKSTAERKLSSPEDGRDPCEAFVGLLEALFDAHDAGTVRDMNANDDASDEASVSTFLSDKMTQLDAEVSRLRRLNALSAVPSEAIVRTMGIFDQEIRAASSHITSLTEDEAVSVRCAERALRCAKVALDVMTAPGMTKESLQEDLVEHLVTAARQTMNALVFPAFDPVRRAEVDSLASIEKSNGAKSARRKSAVGVKAHNHTLLQHLCDVMGSLAHLVSSEHLTDELILQITSMAIAPFVIENVSSLQLRCLQVLRSAFARYENHRGLILEEIYSSLAKVPTSRRNLRSFRLAEDSAIQMLTALVLQLVQSQCAAAGVDSVEHTAFPGGDGGDGGDGDADLGATIMNRFARAHAIGADFVSQFIKRCGTKSDDQDLRSLFENFVQDLFLTSCQPEWPAAEILLSILAQKLMQVIKTKVQEKQSDNLLLFAVDNVGAIAAHLRRQWRALEAGNVTPSMVDAARVQVLGYLAERAKEDLQYEVNDRRCAVICPSQHARTFFLGQWMSETSTDRLQEGDVDGSNHLLARREMLLAQWTVCSDARKPNGSDGSDRSGAVCAMAVLQGDGGLSGRWEQVLRHLLALLRDSSPQVRSRAMKALALVAAADPDVLNQDIVRIGVGNGLVDQAISVRDAAIELIGQYVATKPEFLELYFPLLIERLLDVGVSVRRRVITILRDICVRQPTNPHFAEICVKLLGRSNDAEGIKELVSKSLQVIWFGETPDAFKSVAPVVRGISLATVVGNLTASSLENAEALLSTFVSADGETVDAHAVHVLTSLADALVDHILTLDEKSASAESSALGAQQDRRALTECMAALHMMCRCHPLIMARHVGTLLPFLCAQRPDDVQLVNYAAQMLEVIMPIAPRQSDGFLNSLEESLWKNIVKHSQAVVQSCVKCLCVVAGHVTKNHKFLQNVLVKFTSNLSALLARHDADGVLRDPNAKAAVLRGLFVVGHLCQEFDFDASDASETGNGAVWMRQHFKSSVRQGVFDVLLQFAKSSIEEVRLKAVAAIGALAIRYPSVMLEPETQTLYDGVLSSTSVKLQLQVLKNLQNFLIEDEMRMLKNSSAKGAAVTQGIDIGGYGRHVDGGEDSGVSTSIVQMFSDKILEFLLHGDVLLRQAALSVVGLVLRQGLSHPGLCVPFIIAMEADADQALGERAFQQLGWLNDKFSTFVNQQAVAGFRIAIERKASAAGAPPVLARFYSLIRGTRGRRREFLRSLLQQFETAEAENRFLAGLAVNLAGFPYVLHEEPLFVVYTINRTIAAKWPSLQHALRSELDAASDGNMARSFRAAFEKTKPLFLLSQVRNFLQRLYGVSAAQCDDFQLSDKGFEVAANARGPAAFVPSSVNLSDPKAAYKKFKKAFGEDAVPGTATATATATATAATDPTRRLSINVEGGDNAADMPDDQDAQGKKRRRSIGSAKTKKARKTSKKQRLSLQGANGDESGEDDEDDDNFSPSARRG* # PASA_UPDATE: g3499.t1, single gene model update, valid-1, status:[pasa:asmbl_3545,status:12], valid-1 NODE_210_length_31436_cov_41.0866 . gene 17443 19646 . - . ID=g3499;Name=g3499.t1 NODE_210_length_31436_cov_41.0866 . mRNA 17443 19646 . - . ID=g3499.t1;Parent=g3499;Name=g3499.t1 NODE_210_length_31436_cov_41.0866 . five_prime_UTR 19630 19646 . - . ID=g3499.t1.utr5p1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 19440 19646 . - . ID=g3499.t1.exon1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 19440 19629 . - 0 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 19009 19148 . - . ID=g3499.t1.exon2;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 19009 19148 . - 2 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 18725 18809 . - . ID=g3499.t1.exon3;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 18725 18809 . - 0 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 18526 18624 . - . ID=g3499.t1.exon4;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 18526 18624 . - 2 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 18285 18385 . - . ID=g3499.t1.exon5;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 18285 18385 . - 2 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 18121 18194 . - . ID=g3499.t1.exon6;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 18121 18194 . - 0 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 17845 18025 . - . ID=g3499.t1.exon7;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 17845 18025 . - 1 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . exon 17443 17733 . - . ID=g3499.t1.exon8;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . CDS 17485 17733 . - 0 ID=cds.g3499.t1;Parent=g3499.t1 NODE_210_length_31436_cov_41.0866 . three_prime_UTR 17443 17484 . - . ID=g3499.t1.utr3p1;Parent=g3499.t1 #PROT g3499.t1 g3499 MNDSFDTVCIHGDAGVSGGPDVSPAISVTTTFDVRGGDATYTYSRTGQPVRDRCEAVLGRLEGGHAISYASGTAASCAILQHYMPRRVAVRGGYHGTHQLFDHYRQRHGLTIIDIDDPLDCGDILWLETPKNPHCDIHDVSAYAVRAHSTGAVVVVDATLAPPPLQRCLDAGADVVVHSTTKYLGGHSDCLGGVLIVRSIEQKQQLTTERRTVGSVPGALESWLLLRSLRTLSLRVLRQTNTAEALGLWLDTQGRPHVTQVWHPRLPSHPDYALAARAMPMGTGGMFSVEFASEWLALGIVKHLRLFRDATSLGGVESLVEWRRRHDPSVSACLLRVSCGLEDPADLIADMRQAIARAASDPRGQAEVVSHL* # PASA_UPDATE: g3496.t1, single gene model update, valid-1, status:[pasa:asmbl_3540,status:3], valid-1 NODE_210_length_31436_cov_41.0866 . gene 1356 4297 . + . ID=g3496;Name=g3496.t1 NODE_210_length_31436_cov_41.0866 . mRNA 1356 4297 . + . ID=g3496.t1;Parent=g3496;Name=g3496.t1 NODE_210_length_31436_cov_41.0866 . five_prime_UTR 1356 1418 . + . ID=g3496.t1.utr5p1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 1356 1463 . + . ID=g3496.t1.exon1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 1419 1463 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 1679 1736 . + . ID=g3496.t1.exon2;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 1679 1736 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 1958 2029 . + . ID=g3496.t1.exon3;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 1958 2029 . + 2 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 2196 2260 . + . ID=g3496.t1.exon4;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 2196 2260 . + 2 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 2363 2491 . + . ID=g3496.t1.exon5;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 2363 2491 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 2606 2732 . + . ID=g3496.t1.exon6;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 2606 2732 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 2886 2949 . + . ID=g3496.t1.exon7;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 2886 2949 . + 2 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 3056 3293 . + . ID=g3496.t1.exon8;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 3056 3293 . + 1 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 3399 3632 . + . ID=g3496.t1.exon9;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 3399 3632 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 3764 3930 . + . ID=g3496.t1.exon10;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 3764 3930 . + 0 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . exon 4053 4297 . + . ID=g3496.t1.exon11;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . CDS 4053 4125 . + 1 ID=cds.g3496.t1;Parent=g3496.t1 NODE_210_length_31436_cov_41.0866 . three_prime_UTR 4126 4297 . + . ID=g3496.t1.utr3p1;Parent=g3496.t1 #PROT g3496.t1 g3496 MAPRRVFVVGVGMTKFEKPGRSDDYDYPDLAREAGLKALADAGIAYAAVEQAAVGFVYGDSTCGQRALYELGMTGIPIYNVNNNCSTGSTALFLARNLVAGGACECAMALGFEKMERGSLGAKFNDRCNPMEKHVGLMSDVRGIAPAPIAPQMFGNAGREHMEKYGTTARHFAKIAWKNHKHSVNNPYSQFRDEYTLEQIEKSREVFAPLTMLQCCPTSDGAGAAIVCSEDFVRKHRLEDRAVEILAMEMTTDTPGAFADGSCIKMVGFDMTRLAADKAFASARLTRDAVQVVELHDCFSCNELITYEALGLCPVGKAGEFIDRGDNTYGGKYVVNPSGGLISKGHPLGATGLAQCAELCWQLRGMCGARQVKGARVALQQNIGLGGAVVVALYRLGFPSAIKAPAPSNPAVCATAANVSSKL* # PASA_UPDATE: g3495.t1, single gene model update, valid-1, status:[pasa:asmbl_3542,status:12], valid-1 NODE_210_length_31436_cov_41.0866 . gene 82 1118 . - . ID=g3495;Name=g3495.t1 NODE_210_length_31436_cov_41.0866 . mRNA 82 1118 . - . ID=g3495.t1;Parent=g3495;Name=g3495.t1 NODE_210_length_31436_cov_41.0866 . five_prime_UTR 1065 1118 . - . ID=g3495.t1.utr5p1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . exon 1048 1118 . - . ID=g3495.t1.exon1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . CDS 1048 1064 . - 0 ID=cds.g3495.t1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . exon 896 964 . - . ID=g3495.t1.exon2;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . CDS 896 964 . - 1 ID=cds.g3495.t1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . exon 538 743 . - . ID=g3495.t1.exon3;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . CDS 538 743 . - 1 ID=cds.g3495.t1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . exon 334 391 . - . ID=g3495.t1.exon4;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . CDS 334 391 . - 2 ID=cds.g3495.t1;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . exon 82 127 . - . ID=g3495.t1.exon5;Parent=g3495.t1 NODE_210_length_31436_cov_41.0866 . CDS 82 127 . - 1 ID=cds.g3495.t1;Parent=g3495.t1;3_prime_partial=true #PROT g3495.t1 g3495 MIPNTGALKGLTLFITGASRGIGKQIALKAAKDGANVVIAAKTSTPHAKLPGTVFSAAEEIEAAGGKCLPCVTDIRDENQIATAVAQAVDKFGGIDILINNASAISLTGTLETPMKKYDLMNGVNARGTYAT # ORIGINAL: g3501.t1 original gene structure, not modified by PASA NODE_210_length_31436_cov_41.0866 AUGUSTUS gene 23528 25667 . - . ID=g3501;Name=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS mRNA 23528 25667 . - . ID=g3501.t1;Parent=g3501;Name=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 25568 25667 . - . ID=g3501.t1.exon1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 25568 25667 . - 0 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 25143 25466 . - . ID=g3501.t1.exon2;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 25143 25466 . - 2 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 24862 25003 . - . ID=g3501.t1.exon3;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 24862 25003 . - 2 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 24536 24691 . - . ID=g3501.t1.exon4;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 24536 24691 . - 1 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 24276 24380 . - . ID=g3501.t1.exon5;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 24276 24380 . - 1 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 23940 24061 . - . ID=g3501.t1.exon6;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 23940 24061 . - 1 ID=cds.g3501.t1;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 23528 23763 . - . ID=g3501.t1.exon7;Parent=g3501.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 23528 23763 . - 2 ID=cds.g3501.t1;Parent=g3501.t1 #PROT g3501.t1 g3501 MNGYAEVCPDATFAIAESIPVGMNLTTSLHTPDAWLGIMARATHTLDIAALYMTLTGGATEGQDVLDGIAAAARRGVRVRLAISQPSDAFPDTDLAVLAAAAGPSLSVAYVNMSAIYGSGVLHTKFIIADDNEFYLGSANLDWRSLTQVKELGVVVVGCAALAADLRKVFEGYLYVAEHASLPRTWPSDLETAYDVATPAQLKLNGSGATAFISSAPGELCPRGRTDDLSAIVASIASAKSSISIEVMDYLPTTLYATPRKLWTDIDDALRAAAFERNVTVRLIASQWQYSIPGADAFLRSLDSIDNIQVRLMSVPIIEPYVPFTRVNHAKFMVTDNHAVVCTSNWVGDYFLTTAGVSMTIESPHAVDALAAVFERDWASEYVRPLGAVGRDAN* # PASA_UPDATE: g3503.t1, single gene model update, valid-1, status:[pasa:asmbl_3541,status:3], valid-1 NODE_210_length_31436_cov_41.0866 . gene 27169 29765 . + . ID=g3503;Name=g3503.t1 NODE_210_length_31436_cov_41.0866 . mRNA 27169 29765 . + . ID=g3503.t1;Parent=g3503;Name=g3503.t1 NODE_210_length_31436_cov_41.0866 . five_prime_UTR 27169 27622 . + . ID=g3503.t1.utr5p1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 27169 27712 . + . ID=g3503.t1.exon1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 27623 27712 . + 0 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 27932 27950 . + . ID=g3503.t1.exon2;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 27932 27950 . + 0 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 28178 28197 . + . ID=g3503.t1.exon3;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 28178 28197 . + 2 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 28529 28753 . + . ID=g3503.t1.exon4;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 28529 28753 . + 0 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 28973 29062 . + . ID=g3503.t1.exon5;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 28973 29062 . + 0 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . exon 29208 29765 . + . ID=g3503.t1.exon6;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . CDS 29208 29354 . + 0 ID=cds.g3503.t1;Parent=g3503.t1 NODE_210_length_31436_cov_41.0866 . three_prime_UTR 29355 29765 . + . ID=g3503.t1.utr3p1;Parent=g3503.t1 #PROT g3503.t1 g3503 MADLKVCVVGSGGVGKSCVTIQFLKKKFAEQYDPTVEESYRKQVSIDGKDYDLEIVDTAGQEEFASFRDTALDFGDGFVLVFSLDSVPSWREAQELHNKILRVKDTDKVPMVVVGNKMDLVDKRVVESAEAQAYADSIGSPYFETSAKTGVNIDDSFYEVVRQILRGKPSAQPTARKDSKATKTGKSKQKKKCVVM* # ORIGINAL: g3498.t1 original gene structure, not modified by PASA NODE_210_length_31436_cov_41.0866 AUGUSTUS gene 14750 17195 . + . ID=g3498;Name=g3498.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS mRNA 14750 17195 . + . ID=g3498.t1;Parent=g3498;Name=g3498.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 14750 15535 . + . ID=g3498.t1.exon1;Parent=g3498.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 14750 15535 . + 0 ID=cds.g3498.t1;Parent=g3498.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS exon 15864 17195 . + . ID=g3498.t1.exon2;Parent=g3498.t1 NODE_210_length_31436_cov_41.0866 AUGUSTUS CDS 15864 17195 . + 0 ID=cds.g3498.t1;Parent=g3498.t1 #PROT g3498.t1 g3498 MAHVQPNGLHAPIAGAPFGARPPFPGSAAGPVAVPGQPPMHPHALHPQQQQHTFPTGYGPMEGGGYRPSVPQRYTAPGPTSATAGPGAGGIGGIGGVDAFGNDEDGSNDEGGAGGGAHSWAKNSPATIQWLVDNYETAEGVSLPRSTLYEHYQEYCTVSGVDPVNAASFGKLIRHIFPNLKTRRLGTRGNSKYHYYGIRVKPTSSLAAHHANDDNGDASGPPHYGHQGGAYGADGRGGSAVDAHAQPGQRGREDAGQGHTAGSDSQHPQHTGGAPAPASTSLPDFGPLDAPPPPDVPAEHMSILATTYRAHCERVLDIVSRANFNDVETTWRHFWQTIPDHFRRLLVIPAVVAHIQRCDSLLYETLVDVLVPDVLRPLPVALTQSIRHFAKSLEGWLTFALEGQPQALVMAKLTAVAAFSQTLRRYTSLNHLAQAARAVLHNADQITHMLSDLNRVDFGNVHEQAAWVCQCPDDVVRRLEGEFKQYLQQQHTLEQWAQWLQRVVADALGTRGERDKEGGAGSAGVPDSRPPASMQTARQFLMKWSFYSSLVIRDLTLRSAQSFGSFHLMRLLYDEYMFYLVERHVAAHGSGAVVGILARDFTAPVVVSAHGDTDSSSKDRDDTIDARVGGDVKPAELAIPGQVDGVAGGNAAGEGEDAPITGTGEAAAAAAAAVAVTGLVNGGKRAREDDGTDHDSRAKHARTAE* # ORIGINAL: g7856.t1 original gene structure, not modified by PASA NODE_2100_length_7743_cov_35.0329 AUGUSTUS gene 3527 7636 . + . ID=g7856;Name=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS mRNA 3527 7636 . + . ID=g7856.t1;Parent=g7856;Name=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 3527 4066 . + . ID=g7856.t1.exon1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 3527 4066 . + 0 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 4272 5718 . + . ID=g7856.t1.exon2;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 4272 5718 . + 0 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 5861 5943 . + . ID=g7856.t1.exon3;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 5861 5943 . + 2 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 6196 6297 . + . ID=g7856.t1.exon4;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 6196 6297 . + 0 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 6539 6702 . + . ID=g7856.t1.exon5;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 6539 6702 . + 0 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 6998 7130 . + . ID=g7856.t1.exon6;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 6998 7130 . + 1 ID=cds.g7856.t1;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 7466 7636 . + . ID=g7856.t1.exon7;Parent=g7856.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 7466 7636 . + 0 ID=cds.g7856.t1;Parent=g7856.t1 #PROT g7856.t1 g7856 MDTGWSFGNRSRNRALGKGVAASGGGVARGSSTTHEDAQDAIDEAERLLRGWLEGKNEFDIAIKYTDGSTDGALSAYGENDGGDAAGGSSRGARRNVAPRDVPEVDYDTKRMIRRMIREAPTVSAKDLDTGMGNVVYDPLTAMDLRHQMVREKKALRERERERQQRDKIIGQEVKKTLDKEISERRRLQEMADRAEEARLRAEMAAARRQIDEERAQRRKDMEVSGAIAPASKSATASSSAHSARSSKQRPAPTASSVSTSSPSQARHESAVAVAVAAEQRTNSGDKKNVAGGVHKAPSTRVNGVAAPPPTSGSNPSVGSRDCAEGAPGVNGVASSAEGNSHAARYAIATTKTAAMQQRVADLAADRARRERKEATRKELSRQLQHASEAEAASELKLKRKCFSGWRGIVLEKSARVRRFRALTDCRMLLRVWTAWVKAARESSASKDAERAAMQVADARKKERMAEDFLKRKVLLKAFLTWRSHARFEKESRREADADLVKRSKMQMLLKAAREGRLMDGAGESDDGGVEREGSGLQRMTSGSRAVGSAPPSSRTGKSAVFHGAGASGKQLPTKKKNGAVSAGLVNDGEDEDGEHSDGADMDKRAQRLKLRSEIEREERRARVEALFASAKDGRVSKMPTMPMDLKGWYLVVVCACHFCEAWMDERARLAKQKKEEREQKQREKEAEQMRLLKELEAQKEAEIQADKEAQLQKKKEEKRLAAEKEKERILRNAELARLNAIADAHYARSLLLRRGIAPWIKLVEIAHANNLKAYNFDRVRALKSAIRAWSQEAKRPRLEMEAKADAFRRRKLLRPAFVAWKKFVAVEHRRLVRLEKVAHLHHLRKPFAAWWAITKQRLDAEKEWARSRERIADDYRAR* # ORIGINAL: g7855.t1 original gene structure, not modified by PASA NODE_2100_length_7743_cov_35.0329 AUGUSTUS gene 139 1570 . - . ID=g7855;Name=g7855.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS mRNA 139 1570 . - . ID=g7855.t1;Parent=g7855;Name=g7855.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 1225 1570 . - . ID=g7855.t1.exon1;Parent=g7855.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 1225 1570 . - 0 ID=cds.g7855.t1;Parent=g7855.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS exon 139 884 . - . ID=g7855.t1.exon2;Parent=g7855.t1 NODE_2100_length_7743_cov_35.0329 AUGUSTUS CDS 139 884 . - 2 ID=cds.g7855.t1;Parent=g7855.t1 #PROT g7855.t1 g7855 MMLVVALIPIILVAAFYGAVPTGGRIEAGDYSSMWLWICIVNPLTFTFWSYLMSILFVGCLDVSMRVPIWKLCAPPVVFTYASEVAIMSLVSFYAGSFAFIGIIPLIISLVATFAGLAMVGALYFRTDPAQVCHDSPSSSEGMSSPATAAREDTIRDTTNDSAREGTIRVALSAVEGGVVAEPHAQSLQSTPTSDSTYASIESPRIVPASHCGSSVVDDCISAEMGVEGQDRCVRANSLASTGYNATCGSTATDTEHADWTSVSGDDGECRGVDIGHVTCRAEYFIVLAGFAKSAVVFASFIGVLSLFVIGMSLSGPAAQRVYVVLIGLVAFVFKKIELHVSDLFPLEVSMLVAGLWIEHLSVV # PASA_UPDATE: g1209.t1, single gene model update, valid-1, status:[pasa:asmbl_6793,status:12], valid-1 NODE_3982_length_2401_cov_38.8611 . gene 208 2000 . + . ID=g1209;Name=g1209.t1 NODE_3982_length_2401_cov_38.8611 . mRNA 208 2000 . + . ID=g1209.t1;Parent=g1209;Name=g1209.t1 NODE_3982_length_2401_cov_38.8611 . exon 208 1049 . + . ID=g1209.t1.exon1;Parent=g1209.t1 NODE_3982_length_2401_cov_38.8611 . CDS 208 1049 . + 0 ID=cds.g1209.t1;Parent=g1209.t1;5_prime_partial=true NODE_3982_length_2401_cov_38.8611 . exon 1384 1559 . + . ID=g1209.t1.exon2;Parent=g1209.t1 NODE_3982_length_2401_cov_38.8611 . CDS 1384 1559 . + 1 ID=cds.g1209.t1;Parent=g1209.t1 NODE_3982_length_2401_cov_38.8611 . exon 1813 2000 . + . ID=g1209.t1.exon3;Parent=g1209.t1 NODE_3982_length_2401_cov_38.8611 . CDS 1813 2000 . + 2 ID=cds.g1209.t1;Parent=g1209.t1 #PROT g1209.t1 g1209 EINNILCYNLGVSARAATIEMALAQDPESALYRAVPGILDATGTNSGNPTTNANTNFQGSDYLQPTMFWIMNAANEFVGNMAVGCHGYGSCYWLLGSSLSGASYSMHWTSGTYTIEDAPTWISLARQVPLARFRGNQCGTATYALQTSINVDPANLGISGYSFLQTPYSTAINHNFMRPQIGGNFVPSMPNSQMSACPSQLPWNADASQQTVACVATVIDRLRASFNFPSVSFGAVWLRESWFLVTNSAITDQLSGGLGFVSGGDWTQAPAGYFAIAFDSVFIGSTNPSDMYAGEVGPSLASLSCAAVCTLPVQGTGVFTGGFAPKRMMSIYDGPFYSEGSVFENVTSFTCNLPNCGVYAATTQPVTGAANSAGYYAQVNVVNAAIGWKQVRACDVRVVCA* # PASA_UPDATE: g604.t1, single gene model update, valid-1, status:[pasa:asmbl_8315,status:12], valid-1 NODE_584_length_20619_cov_38.8585 . gene 12708 16857 . - . ID=g604;Name=g604.t1 NODE_584_length_20619_cov_38.8585 . mRNA 12708 16857 . - . ID=g604.t1;Parent=g604;Name=g604.t1 NODE_584_length_20619_cov_38.8585 . five_prime_UTR 16764 16857 . - . ID=g604.t1.utr5p1;Parent=g604.t1 NODE_584_length_20619_cov_38.8585 . exon 12708 16857 . - . ID=g604.t1.exon1;Parent=g604.t1 NODE_584_length_20619_cov_38.8585 . CDS 12708 16763 . - 0 ID=cds.g604.t1;Parent=g604.t1 #PROT g604.t1 g604 MAAHTPIASRTVDAAHEAYMRQSSDLHRRMTETLGRLQANPEVERARALALGSNSTHLSASAAASQSASLSLHGVAVSAGGRDGPSFSYEARALQSPAVLRHGHVAGGGDAGQSALSGTRRPPASASASSPISSGVGASPHASSEWRRALHFDASPAATVLGRASPGDAVGTGGRAHVGPLGTAGVAPVSGRTTPGAHAADGEPTATHHVHAAYQSLLNDSKSEKEHLLIELSGEREKREKAETAARVASESQDALAGAIVSLHAAATRICGDMGIASAGSPSTDHREGARGSCEAVVRMILAVGAAASEHKTLAAHHAQARKEADDRRAEAEKAQADVMAVLDDSLQQLEAAHRTAAEKGAVIEALGAEVEAHRQCLEDSERRIADMARDHSSALAQLHHQLDGALRSAEESRQQTVAADERSEAFRADAEAARRSAEDARSLRREAQRALKKAEQRVERKATEFEEKVRQLEATVADGETDRRRLAEELHKEKSARLGAMSSAETARDEEMRRRRELMATMQATIEAASEEHARTISRLQSQMREFQEAQMDTQRQWKETQRLLDDVIRERDAARHEAQAEAQRVVDAQTEAARLTEEIVEMKRLRRKERGEADDALARERTRGEEMEARAREVGREVERLRSICESLEARSADERARHATLLEEERGRVAEARREHEALRMESAAARRELSIAREELLGARDSSERGQAALHAQGRDLSERLAASEARVLDLDQELSSVVAESARARAEAERRTAQLAKDLAEGKSSISSVSGRAAELEQEKGAVAAALEEARKDNESLARKLHRARRDAQQQMARVTTEHGSALDAMHAKYRDAEQRALALADELGAAKSQASEEARFCADERAGKLKIMQAAEVRWQETVRRLKDASEESDRLTGELEKALARARAAEEQLAAVRERAAETDEQTAAHSAAILTALDGFVADVLSLFGCPQIRRLKGGGATEPAFRAEGVRDLLATAAKLLVARRDEHARAAADLEEALAEARRAHEASESDRAHATREAARRANDLEGLRLSSQRERAESETALHAARTAADRAEGRVKALEEALEKGQSALLEARRVCEERQRAIEGLTGDRDATQGAMQTELSTALKKRIRTKEKLLRTRRELSEALAKLTDARKLASDLESASSRKIDRLTAELASLQAAAVRTEEHCAALQRRLEDARNTTEATRQESRARMRALEGEMSGLLSAVRDSDVRLVSDPDSARMHASSSRGGAWAASSDLGQFRSKGDLYDTDIGAHLSLGTPRGGTLLSQVPASSSSGLFFGKAGDASLLHARTPAVGASSGGAMMDSVGERGARGVSMIGGYTPSMGRTPLDGALSYSRAR* # PASA_UPDATE: g602.t1, single gene model update, valid-1, status:[pasa:asmbl_8318,status:3], valid-1 NODE_584_length_20619_cov_38.8585 . gene 5843 8993 . - . ID=g602;Name=g602.t1 NODE_584_length_20619_cov_38.8585 . mRNA 5843 8993 . - . ID=g602.t1;Parent=g602;Name=g602.t1 NODE_584_length_20619_cov_38.8585 . five_prime_UTR 8643 8993 . - . ID=g602.t1.utr5p1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 8475 8993 . - . ID=g602.t1.exon1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 8475 8642 . - 0 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 8107 8301 . - . ID=g602.t1.exon2;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 8107 8301 . - 0 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 7838 7928 . - . ID=g602.t1.exon3;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 7838 7928 . - 0 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 7486 7596 . - . ID=g602.t1.exon4;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 7486 7596 . - 2 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 7060 7289 . - . ID=g602.t1.exon5;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 7060 7289 . - 2 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 6768 6935 . - . ID=g602.t1.exon6;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 6768 6935 . - 0 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 6403 6541 . - . ID=g602.t1.exon7;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 6403 6541 . - 0 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . exon 5843 6243 . - . ID=g602.t1.exon8;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . CDS 6176 6243 . - 2 ID=cds.g602.t1;Parent=g602.t1 NODE_584_length_20619_cov_38.8585 . three_prime_UTR 5843 6175 . - . ID=g602.t1.utr3p1;Parent=g602.t1 #PROT g602.t1 g602 MEKYEKLGKIGEGSYGVVIKCRNKDTGQVVAMKKFLESEDDPQIRKIALREVRMLKQLKHGNLVNLLEVFRRKRKLHLVFEFIDRTVLDELDNNPNGLDEMTVKQILYQILKAVNFCHAHNIIHRDVKPENILVSKKGIVKLCDFGFARSLAGPGAVYTDYVATRWYRAPELLVGDTQYGTSVDVWAIGCVFAEMLTGQPLWPGKSDIDQLYHIISTLGNLTPRHVEIFSNNSFFSGLSIPTPDTIIPLKVRFPKFSKFTLDFMQSCLHLEPNERLTCAQLLDHPYFDGFREWFEVDLRNLMAKAAKESAPPQKKKPPNKKGGRTGGRGDDDNDDAKDVSTLAGKRSDSKDHSHLPQLAGHAPGGGDDDSKKKDRKDGKTPNPHRLPLI* # PASA_UPDATE: g601.t1, single gene model update, valid-1, status:[pasa:asmbl_8316,status:12],[pasa:asmbl_8317,status:12], valid-1 NODE_584_length_20619_cov_38.8585 . gene 2318 5424 . - . ID=g601;Name=g601.t1 NODE_584_length_20619_cov_38.8585 . mRNA 2318 5424 . - . ID=g601.t1;Parent=g601;Name=g601.t1 NODE_584_length_20619_cov_38.8585 . five_prime_UTR 5338 5424 . - . ID=g601.t1.utr5p1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 5233 5424 . - . ID=g601.t1.exon1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 5233 5337 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 5031 5103 . - . ID=g601.t1.exon2;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 5031 5103 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 4704 4780 . - . ID=g601.t1.exon3;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 4704 4780 . - 2 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 4310 4498 . - . ID=g601.t1.exon4;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 4310 4498 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 3854 4006 . - . ID=g601.t1.exon5;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 3854 4006 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 3436 3528 . - . ID=g601.t1.exon6;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 3436 3528 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 2946 3233 . - . ID=g601.t1.exon7;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 2946 3233 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 2535 2803 . - . ID=g601.t1.exon8;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 2535 2803 . - 0 ID=cds.g601.t1;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . exon 2318 2396 . - . ID=g601.t1.exon9;Parent=g601.t1 NODE_584_length_20619_cov_38.8585 . CDS 2318 2396 . - 1 ID=cds.g601.t1;Parent=g601.t1 #PROT g601.t1 g601 MHLRRSSVAAAIAAVLLCIAACPVDAIKQNYNIDTSKSPKRDFFETLHGGGDSVSMEVIVKNCKGQENKVFFLGGTYQAVGSIVQSTMHMDEIMRCCARVPENGTECDLIAMYNRTVNGANAFSLSTAHGKVVGAMMSTHDCLSSWMMVWDKYTIAKTSTYQIHMQVCDPSRLLVMDFHPVQFRNHYGYLPEEQYPLLVFYGVMGIMYLVMGLAWMGVSAYFWRDLMRVQFCISGVIFIGMVEMAFFYGHYKVFNTTGNIDVALMVFATLMTGLKKTLARLFLLVISMGYGIVRPTLGTTIYKLSGLMCIYFLLSVIADSSRELNEGRIEMAAGDDSSQKVTDSSFAELPSYLIDVLVFWWIFFSLHVTMKSLQLKKQDIKLRMYVRFTYMLIFISLAAAGFIIYIAAFKLVLRKSLCRARAPTSKGLNTEHSPFPIKLEM* # ORIGINAL: g605.t1 original gene structure, not modified by PASA NODE_584_length_20619_cov_38.8585 AUGUSTUS gene 17502 20582 . + . ID=g605;Name=g605.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS mRNA 17502 20582 . + . ID=g605.t1;Parent=g605;Name=g605.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 17502 20582 . + . ID=g605.t1.exon1;Parent=g605.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 17502 20582 . + 0 ID=cds.g605.t1;Parent=g605.t1 #PROT g605.t1 g605 MAAALARFVQGSDRSTLADDAAYTVAWLCGLPADNALEAVAFSAGLVELMRRWFKQGRPRDLYARGAVGAFGATASDDPPALHPVDSTALASVYRAVLRRRAGISLSSELFFCIELLFADHDGGGGAGQREVAGAGAGDASAGTRFAHLFASAGDCACVAALTLPAFSDLLRAMGRGMLQALADCNRLATHAPDFARTLRGWMDSAEADFDDGKTDGRAAPFYYGQPVASESEDNRSMHETRALQDVYNCRQRARDGFYALLREWTSANKSQQSRATSAFLTGGVDERVRSLLGEMGPSNMLWFAGIFVGALVRAAGASTVPSQQSAPSPQPAAGTDAGFLSTVDGKRLQQLNARMGGRNTTGTADGRREPCDAAGFAIGAGDIFTRFLLATDSHSLCRHVMAASLACIASIETAMAAQAERSAATEFADSALGLRALGRIIGLLTCFVPVGGRVVVADGTVAQFVSAVDRLVPAVPIATVLRQALDRGILALALLWIVEYAGTTSRDPIFAKTRAHSHTLSALCAAYRSVVPGTPADCARDICRPRMLAIATLETLFDSLSISPWAYGLADSVSDADDADCFVRPAADACLLNGCPDSAVSPGTLFACALLLYKASVRAQLGFRKSADRDGARGRQSISRKVALTRAVGPTALEEMQRWFLWGNKDAESVVDFVANGTARRIAQRVTVTNPDDLAGARREAGALRAEYSLAEDEPDARTPTNRTTLSRRQRASERLVALVLQECDCADADVDAAVRAMLRGTSAEVAGIAAGVARERMRSVASALVQARATDNTEPSADPARKSLRTYGASTHPSLSAADVTDDIERLVAMVCGSDGAHIDAVLVADAAVKASSALCAAVGDEGFIGHSVARRRQWMRVCPAAARAAVAIASRCDEPVEEHQPSPSPLPANSNGHAVAVRALLDALAAAADAGLRVSVPWASHAREMCRTLNTVRAANVAVAMHSLAVAGLTSRRDVERAVIAICSSSDAFGALAPAMRSLVASSAGPMRRVGWQMEGLVMTRDP* # ORIGINAL: g603.t1 original gene structure, not modified by PASA NODE_584_length_20619_cov_38.8585 AUGUSTUS gene 10538 12551 . + . ID=g603;Name=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS mRNA 10538 12551 . + . ID=g603.t1;Parent=g603;Name=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 10538 10561 . + . ID=g603.t1.exon1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 10538 10561 . + 0 ID=cds.g603.t1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 10643 10711 . + . ID=g603.t1.exon2;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 10643 10711 . + 0 ID=cds.g603.t1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 11127 11184 . + . ID=g603.t1.exon3;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 11127 11184 . + 0 ID=cds.g603.t1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 11406 11671 . + . ID=g603.t1.exon4;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 11406 11671 . + 2 ID=cds.g603.t1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 11779 11913 . + . ID=g603.t1.exon5;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 11779 11913 . + 0 ID=cds.g603.t1;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS exon 12369 12551 . + . ID=g603.t1.exon6;Parent=g603.t1 NODE_584_length_20619_cov_38.8585 AUGUSTUS CDS 12369 12551 . + 0 ID=cds.g603.t1;Parent=g603.t1 #PROT g603.t1 g603 MARVLGVEVGGMHTVLAVSVEGDRLDAAERKTYGHITTTPKKGWADVDFVALMLRKREGIADHGAPSVCYITVGTGVGVGAFVGGCRLHGALHPEGGHIPCEQHPYDAQRGYSGACPYHGRCVEGMLATSALAARVGLQSRDLKGLPDDHFLWDIAAHYAAHLCACLTLLLSPHRIVLGGGLFQRKVLFPLVRTKLAALLNGYIRVAEVRDMDTYISESSFGPNAGLAGAFAMAREALEPDRNQ* # PASA_UPDATE: g5631.t1, single gene model update, valid-1, status:[pasa:asmbl_939,status:12], valid-1 NODE_1245_length_12776_cov_43.7111 . gene 508 3048 . + . ID=g5631;Name=g5631.t1 NODE_1245_length_12776_cov_43.7111 . mRNA 508 3048 . + . ID=g5631.t1;Parent=g5631;Name=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 508 536 . + . ID=g5631.t1.exon1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 508 536 . + 0 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 846 1169 . + . ID=g5631.t1.exon2;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 846 1169 . + 1 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 1548 1697 . + . ID=g5631.t1.exon3;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 1548 1697 . + 1 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 1990 2215 . + . ID=g5631.t1.exon4;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 1990 2215 . + 1 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 2396 2479 . + . ID=g5631.t1.exon5;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 2396 2479 . + 0 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . exon 2657 3048 . + . ID=g5631.t1.exon6;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . CDS 2657 2887 . + 0 ID=cds.g5631.t1;Parent=g5631.t1 NODE_1245_length_12776_cov_43.7111 . three_prime_UTR 2888 3048 . + . ID=g5631.t1.utr3p1;Parent=g5631.t1 #PROT g5631.t1 g5631 MFQDLSIVENLRIPYRTLCSFVLTVKRNYRTVPYHNWMHAFTVAHSMYTILATAKSAKKVMSELEQAALFVACLCHDLDHRGTNNQFQQIVDTPLSHLYGTSVMEQHHFNHAVTILSCEESNIFERLPRDELRFVFQRLEEGILATDLSRHFSARAEIRRIIEESGNSKIDIEHLPRVKELMRALLMTVCDLSLNAKPWDMSFPGCVNVMTEFFCQGDVEKELGLTPLPLMDRQNRDKMALMQVDFLDNIALPAFQLLAKLIPDTHPLEELAEENKRHWRELSQNQKKLHDILDTYEFKDERAQKMAKALVGIRDSVPSLVVDTSSFSMQARTDSAKGKHKPPSSAS* # PASA_UPDATE: g5632.t1, single gene model update, valid-1, status:[pasa:asmbl_942,status:12], valid-1 NODE_1245_length_12776_cov_43.7111 . gene 3728 5509 . - . ID=g5632;Name=g5632.t1 NODE_1245_length_12776_cov_43.7111 . mRNA 3728 5509 . - . ID=g5632.t1;Parent=g5632;Name=g5632.t1 NODE_1245_length_12776_cov_43.7111 . five_prime_UTR 5450 5509 . - . ID=g5632.t1.utr5p1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . exon 5447 5509 . - . ID=g5632.t1.exon1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . CDS 5447 5449 . - 0 ID=cds.g5632.t1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . exon 4849 4979 . - . ID=g5632.t1.exon2;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . CDS 4849 4979 . - 0 ID=cds.g5632.t1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . exon 4456 4621 . - . ID=g5632.t1.exon3;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . CDS 4456 4621 . - 1 ID=cds.g5632.t1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . exon 3892 4098 . - . ID=g5632.t1.exon4;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . CDS 4081 4098 . - 0 ID=cds.g5632.t1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . exon 3728 3737 . - . ID=g5632.t1.exon5;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . three_prime_UTR 3892 4080 . - . ID=g5632.t1.utr3p1;Parent=g5632.t1 NODE_1245_length_12776_cov_43.7111 . three_prime_UTR 3728 3737 . - . ID=g5632.t1.utr3p2;Parent=g5632.t1 #PROT g5632.t1 g5632 MVNVPKTRNTFCKGKKCRKHTLHKVSQYKTGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTECKYKMQLALKRCKHFELGGEKKRKGGPVF* # PASA_UPDATE: g5633.t1, single gene model update, valid-1, status:[pasa:asmbl_940,status:3], valid-1 NODE_1245_length_12776_cov_43.7111 . gene 5867 8493 . + . ID=g5633;Name=g5633.t1 NODE_1245_length_12776_cov_43.7111 . mRNA 5867 8493 . + . ID=g5633.t1;Parent=g5633;Name=g5633.t1 NODE_1245_length_12776_cov_43.7111 . five_prime_UTR 5867 6053 . + . ID=g5633.t1.utr5p1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 5867 6162 . + . ID=g5633.t1.exon1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 6054 6162 . + 0 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 6309 6418 . + . ID=g5633.t1.exon2;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 6309 6418 . + 2 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 6556 6662 . + . ID=g5633.t1.exon3;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 6556 6662 . + 0 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 6843 7056 . + . ID=g5633.t1.exon4;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 6843 7056 . + 1 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 7231 7333 . + . ID=g5633.t1.exon5;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 7231 7333 . + 0 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 7555 7631 . + . ID=g5633.t1.exon6;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 7555 7631 . + 2 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . exon 7853 8493 . + . ID=g5633.t1.exon7;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . CDS 7853 8035 . + 0 ID=cds.g5633.t1;Parent=g5633.t1 NODE_1245_length_12776_cov_43.7111 . three_prime_UTR 8036 8493 . + . ID=g5633.t1.utr3p1;Parent=g5633.t1 #PROT g5633.t1 g5633 MTDSGKDKGKSDLERIGLFSEAGYTTINDLFKDKKSAPCCEEKFKGKQMLIAGEHHGQLPDSFFDKKFVRVFEGESWADPIQRERRTRNENSKKNIAKAFKPVGTSPKPSGSGSFFGTFGGPLPSLSGASVPDKPKRPVGKNFLTNPGKRGTGYGYLNVTIGTPYAYSSDTYDAMQKQMKEERERHKQRLVGKAFINNHAPKSVFDTNPYATDKEFPAKEHDEEKKLDKLPFRPSHPAKSGVWGCFESYPAHDSGNEPAEPPVRKERHQAPIFRPSGGSKSIPFKSIVEMNVPLRPLAYL* # ORIGINAL: g5635.t1 original gene structure, not modified by PASA NODE_1245_length_12776_cov_43.7111 AUGUSTUS gene 12157 12776 . + . ID=g5635;Name=g5635.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS mRNA 12157 12776 . + . ID=g5635.t1;Parent=g5635;Name=g5635.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 12157 12776 . + . ID=g5635.t1.exon1;Parent=g5635.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 12157 12776 . + 0 ID=cds.g5635.t1;Parent=g5635.t1 #PROT g5635.t1 g5635 MLPTAPRASRRQRGLEPEPLQLQIDPHQPPNMDNNNLNGQAPVNVDEAGPAHVPNVPPAPVPAPQPAVPNAPQVPGADIAAQINAQINAAIQAAFANIGPQLAQAVAGAVAPLMLNNQPVNQGGQPNPPGHVPAGPFPAPAAVAPAAQLPPPGNGDLRMDMRAYQDAIGQFHGDRSKDNQLDIDGYLSRLEAVTQDLPINTRDTTR # ORIGINAL: g5634.t1 original gene structure, not modified by PASA NODE_1245_length_12776_cov_43.7111 AUGUSTUS gene 8972 11089 . - . ID=g5634;Name=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS mRNA 8972 11089 . - . ID=g5634.t1;Parent=g5634;Name=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 10680 11089 . - . ID=g5634.t1.exon1;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 10680 11089 . - 0 ID=cds.g5634.t1;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 10276 10476 . - . ID=g5634.t1.exon2;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 10276 10476 . - 1 ID=cds.g5634.t1;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 9927 10110 . - . ID=g5634.t1.exon3;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 9927 10110 . - 1 ID=cds.g5634.t1;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 9679 9770 . - . ID=g5634.t1.exon4;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 9679 9770 . - 0 ID=cds.g5634.t1;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS exon 8972 9482 . - . ID=g5634.t1.exon5;Parent=g5634.t1 NODE_1245_length_12776_cov_43.7111 AUGUSTUS CDS 8972 9482 . - 1 ID=cds.g5634.t1;Parent=g5634.t1 #PROT g5634.t1 g5634 MLSSVFRRAVGAVPSQATAARRHLSKIVSSADPAGKPRWMSAEEAVSVISSGNTVFVHGAAATPTHLIEAMAKHGLQNGLKGVKVVHIHTDGELAHLKPEYRGIFRDNSFFMGANVREAVNAGYADYTPAFLSEIPRFFRRGIVPLDVALVNVSPPDEHGFCTLGVSVDIAVAACQTAKHIVAMVNTKMPRTHGDGVISVRDPRVRLVEHDAPLPQHPPAPLSAEETAIGKIIADNLVGDRATLQMGIGSIPDATLAALRNHKACDLGIHSEMFSDGLVDLLTTGAVTNRYKKHHAGQIVGGFCVGSDKVYNMIHDNPSVVMRDIEWVNDPYVISQNDNVVAINSCIEIDLTGQVVSDSIGKRFFSGVGGQLDFVRGASLSLNGKPIMALPSVTSKGESRITPSIKPFGGVVTTRAHVHYVVTEFGIAELHGKSVRERAQALIQIAHPSHREGLNKAAVERFGTL* # ORIGINAL: g11415.t1 original gene structure, not modified by PASA NODE_3576_length_3169_cov_33.2382 AUGUSTUS gene 49 1724 . - . ID=g11415;Name=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS mRNA 49 1724 . - . ID=g11415.t1;Parent=g11415;Name=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS exon 1488 1724 . - . ID=g11415.t1.exon1;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS CDS 1488 1724 . - 0 ID=cds.g11415.t1;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS exon 1025 1176 . - . ID=g11415.t1.exon2;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS CDS 1025 1176 . - 0 ID=cds.g11415.t1;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS exon 397 501 . - . ID=g11415.t1.exon3;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS CDS 397 501 . - 1 ID=cds.g11415.t1;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS exon 49 127 . - . ID=g11415.t1.exon4;Parent=g11415.t1 NODE_3576_length_3169_cov_33.2382 AUGUSTUS CDS 49 127 . - 1 ID=cds.g11415.t1;Parent=g11415.t1 #PROT g11415.t1 g11415 MSAMMMKSIAMRAVLCVCLCVCLPTHAALADALRRPVTRAPGITSNAQTGQFGVWINGTVVPDEYSEYAFGSEQQPFSQLAQVKVVVSDSTTAENPALVVVRQKRTIESWPVPSEFIADTDTSGRLCKYSEIMTVICPEFDDRGLERPDKSFSVAITGSTTAAFWMFAETVDVELKELTPKEVIGTPSGVL # PASA_UPDATE: g2521.t1, single gene model update, valid-1, status:[pasa:asmbl_5737,status:12], valid-1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . gene 1098 3427 . + . ID=g2521;Name=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . mRNA 1098 3427 . + . ID=g2521.t1;Parent=g2521;Name=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . five_prime_UTR 1098 1267 . + . ID=g2521.t1.utr5p1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . exon 1098 1901 . + . ID=g2521.t1.exon1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . CDS 1268 1901 . + 0 ID=cds.g2521.t1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . exon 2079 2508 . + . ID=g2521.t1.exon2;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . CDS 2079 2508 . + 2 ID=cds.g2521.t1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . exon 2791 2870 . + . ID=g2521.t1.exon3;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . CDS 2791 2870 . + 1 ID=cds.g2521.t1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . exon 3239 3427 . + . ID=g2521.t1.exon4;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . CDS 3239 3411 . + 2 ID=cds.g2521.t1;Parent=g2521.t1 NODE_3221_length_3978_cov_41.0392_potentialcontaminant . three_prime_UTR 3412 3427 . + . ID=g2521.t1.utr3p1;Parent=g2521.t1 #PROT g2521.t1 g2521 MLHMPTAAVSQERSRRNGRVANCRAWYFGVICLCLVVAGQWPLVVSADGDAYDAMQVPCLAMSPLMDAVRSFNSNLNVRDPKTGRIASDDREYIAGTHAGLCVAGDVATVVFWVNLPGNDSLVVGNIEKALRVQVPGTQRWISMMPDPDSEHMLRPSATYTTTVPCPPSEDGLPETVTFSMDVTWDSATPQAIYQYSKRCNLPLTLTSVRKSPRVDFVVVQDPDFDVGEMQIVANEGTSPESAETTFYDFLLPAKTCESLENEKGVGQKKATVKFYLDNFFSGPYFSERFGVMSVYVERPEYELYVELSTTEKQLLATFTLGTPFVRVANGEFVATPIDISACTKATYLIQHKKRPLVNYKRQCEGVPLPDAVIKVAQFGSGTSLSGGAIAGIVVGSVCAAAVIGVVVFVALTRKRRKGGGGKSYFSLSPTGMDDYND* # ORIGINAL: g6752.t1 original gene structure, not modified by PASA NODE_3437_length_3465_cov_30.5254 AUGUSTUS gene 2826 3340 . - . ID=g6752;Name=g6752.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS mRNA 2826 3340 . - . ID=g6752.t1;Parent=g6752;Name=g6752.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 3286 3340 . - . ID=g6752.t1.exon1;Parent=g6752.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 3286 3340 . - 0 ID=cds.g6752.t1;Parent=g6752.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 2826 3043 . - . ID=g6752.t1.exon2;Parent=g6752.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 2826 3043 . - 2 ID=cds.g6752.t1;Parent=g6752.t1 #PROT g6752.t1 g6752 MDETLNNGEPDAWVGNGAVGGESALSSSDAHYASSGVDSYADHTATVTDDRSSDDLRLLGESSDAVDGTSRGWSVRGRLQLLRQTSSPNT* # ORIGINAL: g6751.t1 original gene structure, not modified by PASA NODE_3437_length_3465_cov_30.5254 AUGUSTUS gene 172 2164 . + . ID=g6751;Name=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS mRNA 172 2164 . + . ID=g6751.t1;Parent=g6751;Name=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 172 220 . + . ID=g6751.t1.exon1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 172 220 . + 1 ID=cds.g6751.t1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 626 804 . + . ID=g6751.t1.exon2;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 626 804 . + 0 ID=cds.g6751.t1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 983 1126 . + . ID=g6751.t1.exon3;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 983 1126 . + 1 ID=cds.g6751.t1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 1438 1555 . + . ID=g6751.t1.exon4;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 1438 1555 . + 1 ID=cds.g6751.t1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 1789 1932 . + . ID=g6751.t1.exon5;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 1789 1932 . + 0 ID=cds.g6751.t1;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS exon 2108 2164 . + . ID=g6751.t1.exon6;Parent=g6751.t1 NODE_3437_length_3465_cov_30.5254 AUGUSTUS CDS 2108 2164 . + 0 ID=cds.g6751.t1;Parent=g6751.t1 #PROT g6751.t1 g6751 VVYKQPIDTLGTMEQMVSNPALFPDSVDVAHYEEPIVLSTLIMPEEYVGKVLTLCQQKRGVQKEINYIDQTRVMLRYELPLNEIITNFYDRLKSMTSGYCSFDYEVIGYRRADIVRMDILINGKPVDALSTIIHESSANAIGRSLCARLKETISRQLYEVALQAKVGGKVVARESLGAMRKDVTAKCSGGDIQRKMKLLNRQKEGKKLLKKVGNIELSKETFLAVLTRE* # PASA_UPDATE: g1383.t1, single gene model update, valid-1, status:[pasa:asmbl_4096,status:12],[pasa:asmbl_4097,status:12],[pasa:asmbl_4098,status:12],[pasa:asmbl_4099,status:12], valid-1 NODE_2348_length_6620_cov_41.5487 . gene 297 3028 . + . ID=g1383;Name=g1383.t1 NODE_2348_length_6620_cov_41.5487 . mRNA 297 3028 . + . ID=g1383.t1;Parent=g1383;Name=g1383.t1 NODE_2348_length_6620_cov_41.5487 . five_prime_UTR 297 298 . + . ID=g1383.t1.utr5p1;Parent=g1383.t1 NODE_2348_length_6620_cov_41.5487 . exon 297 1064 . + . ID=g1383.t1.exon1;Parent=g1383.t1 NODE_2348_length_6620_cov_41.5487 . CDS 299 1064 . + 0 ID=cds.g1383.t1;Parent=g1383.t1;5_prime_partial=true NODE_2348_length_6620_cov_41.5487 . exon 1224 3028 . + . ID=g1383.t1.exon2;Parent=g1383.t1 NODE_2348_length_6620_cov_41.5487 . CDS 1224 2689 . + 2 ID=cds.g1383.t1;Parent=g1383.t1 NODE_2348_length_6620_cov_41.5487 . three_prime_UTR 2690 3028 . + . ID=g1383.t1.utr3p1;Parent=g1383.t1 #PROT g1383.t1 g1383 CDPAVDAYSVYLDGECVCTVDTISVFMQGLAPGHVYQLSVASLAGEAHSDPSQPIAFELTSDDATAEIVPSEDVVDEVEGDEGLTEDVDVEEDAHVTADTADSASEAKLSEVAETLASATIAEEEKERNETEVAAGPIVAPTATATTSATPTTSTTAVTKPLLESTLDAFCWHECVCVKRVSATALMAATSDGAGVGGLFLLSAEEGDVVLVLGPLRPDGVVLAKSASGRAGLAPTASFALVVGKTPSAVAVTVDGDVVPIRLLLALYQYDPLVMSPNENPDNELAFDAGEIVVSLGDMHEDGFFDAQSVEGRRGLVPSNFLRCIDEDTVHFSDLPAPTPTKQRSLNMSRSSSIAKSSDGPTLSRSGSAAGRMKRNESVGTGTYRVLRSESLSKSQSGMTAAEKEPVTASSSSAPASLSNSAEKLSAADSTTHALEGVAEDKEAPDSPAPKSWRSDSLAMAIGAASNAQKSAQTIAHASASASTAATATSVIAASSTPPTKTETVATHVAPADALASTSTGASLPQTSAPAANAESSGEPSQPLSQPKAMGLSLSMQLGPKGSALAPAEVSQLSSASSAPSLDAPMSSTATDKNPADGKTTAATAVSGGKPPLPSSDGSHSPPTRAMSASQSNASITGMSASASMSMFASGSKSVRSESRASHASSHGESDALSQSHGKAGASSLHVASAVGDGDNASVYSFNSEHDGDGDGGEKKKKKKKKGILGFFGLKKSSSKKSLKGEK* # PASA_UPDATE: g1384.t1, single gene model update, valid-1, status:[pasa:asmbl_4095,status:3], valid-1 NODE_2348_length_6620_cov_41.5487 . gene 3915 6550 . - . ID=g1384;Name=g1384.t1 NODE_2348_length_6620_cov_41.5487 . mRNA 3915 6550 . - . ID=g1384.t1;Parent=g1384;Name=g1384.t1 NODE_2348_length_6620_cov_41.5487 . five_prime_UTR 6354 6550 . - . ID=g1384.t1.utr5p1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 6314 6550 . - . ID=g1384.t1.exon1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 6314 6353 . - 0 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 5968 6102 . - . ID=g1384.t1.exon2;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 5968 6102 . - 2 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 5581 5620 . - . ID=g1384.t1.exon3;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 5581 5620 . - 2 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 5168 5281 . - . ID=g1384.t1.exon4;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 5168 5281 . - 1 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 4785 4863 . - . ID=g1384.t1.exon5;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 4785 4863 . - 1 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 4385 4466 . - . ID=g1384.t1.exon6;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 4385 4466 . - 0 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . exon 3915 4233 . - . ID=g1384.t1.exon7;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . CDS 4073 4233 . - 2 ID=cds.g1384.t1;Parent=g1384.t1 NODE_2348_length_6620_cov_41.5487 . three_prime_UTR 3915 4072 . - . ID=g1384.t1.utr3p1;Parent=g1384.t1 #PROT g1384.t1 g1384 MATNIFLFVPNLIGYARIVFAFVAFYYFPRDHNIAFWSYMTSCLLDAFDGHAARYLNQSTRFGAVLDMVTDRCTTACLMVTLANLYPDYAVAFQFLISLDIGSHWIHMYSSLIRGQSSHKAVSKNNWFLHLYYTSRPVLFWMCAGNETFFAALYLLHFQAGPLVTIAGMSVGLWQLLAAICFPVCFAKQFISVIHIVSASKDIAELDLADRKQKGL* # ORIGINAL: g7332.t1 original gene structure, not modified by PASA NODE_438_length_23771_cov_41.8464 AUGUSTUS gene 18128 18689 . - . ID=g7332;Name=g7332.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS mRNA 18128 18689 . - . ID=g7332.t1;Parent=g7332;Name=g7332.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 18568 18689 . - . ID=g7332.t1.exon1;Parent=g7332.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 18568 18689 . - 0 ID=cds.g7332.t1;Parent=g7332.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 18128 18218 . - . ID=g7332.t1.exon2;Parent=g7332.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 18128 18218 . - 1 ID=cds.g7332.t1;Parent=g7332.t1 #PROT g7332.t1 g7332 MASVGLPDALALRALLLTRMQAALDDIAGDLAGEKSAAQRIGYKDGVGAVFAVTNEEGSARISRMPCGAN* # PASA_UPDATE: g7333.t1, single gene model update, valid-1, status:[pasa:asmbl_7269,status:12],[pasa:asmbl_7272,status:12], valid-1 NODE_438_length_23771_cov_41.8464 . gene 19449 23757 . + . ID=g7333;Name=g7333.t1 NODE_438_length_23771_cov_41.8464 . mRNA 19449 23757 . + . ID=g7333.t1;Parent=g7333;Name=g7333.t1 NODE_438_length_23771_cov_41.8464 . five_prime_UTR 19449 19649 . + . ID=g7333.t1.utr5p1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 19449 21000 . + . ID=g7333.t1.exon1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 19650 21000 . + 0 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 21196 21201 . + . ID=g7333.t1.exon2;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 21196 21201 . + 2 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 21430 22098 . + . ID=g7333.t1.exon3;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 21430 22098 . + 2 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 22237 22607 . + . ID=g7333.t1.exon4;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 22237 22607 . + 2 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 22906 22959 . + . ID=g7333.t1.exon5;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 22906 22959 . + 0 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 23105 23348 . + . ID=g7333.t1.exon6;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 23105 23348 . + 0 ID=cds.g7333.t1;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . exon 23573 23757 . + . ID=g7333.t1.exon7;Parent=g7333.t1 NODE_438_length_23771_cov_41.8464 . CDS 23573 23757 . + 2 ID=cds.g7333.t1;Parent=g7333.t1 #PROT g7333.t1 g7333 MPQSDGQPQPQPFAARHEQPGRVGRKTAMPMMTSHNTATGRLSPQYGVAGNGASLAAAATTPAWACALKRALLRTRPYIRWWSCLFILCVIVTGIGVSNAVYREISGRERRELQRDLEVVARMDVQSGNEVFERITRSVLNLRIAFRIAPVGTLTFREFVDSVKILDRPQAATSFLWAPHVTAEERDAFESRTRAINSNETRFVNFTITDASRSSSQPSAMSFAVAPNRTEYFPLLYDWSSINMPVVDQPGVDFLNLPGISNISDAVASGLPLIRIFMAPPEHDRMGKELLIIIPVYETADFPPTVEARQQSILGLLSVGAGVGTLIDNVRRAPADLEMYIFDESNVLLYANANPSIPTAQSPADIGSVHGSRFDIVAQIADRTITIVCVPTQKLVDKNTSVNPVLFACLTGLGFMVILVASVCAIRTIVKGQEKVAMAERRRQCVNEMIGFVNHELRNPLNAIVGLIDHATMMMEDIVSAFARLSSVPDVDKSLATTNASMRTTCSAISHVRSGAASLEGGDGNGSKACLSRTSSMGSAASDLADKVGSVLRDLRDTGQMCSLMRHIVDDVLDIRRLEEGALKVLISPVSLDMLLDEVKAIVQPKLSEKPTLSLSVEGLGRDVFFRCDPVRVKQVLLNFVVNAIKYSDAGPLSVRVAATEDGERLRFSVQDHGRGIEDSKKPYLFQPFMQLNGAARHQGVGLGLYLCSMLVDAMCGEIGFDSTAGVGSTFWFEIPFDEAERVEVEVDVDCGVATSASDSDAAAEAAVGGTTHVHMVPSPPSVGTDFADCGNADREGLALTNTTTCKVEEIALQILKPPALEAATPADPSTAPTRTVRHLVCDDMQVNRVVLKRYIQHLFPGIAVDEAENGLVGLQLASDRDYEIVWMDVQMPVMDGIEATKRIRAMPQCACTSVIGITGDVTAEQVSLYHEIGMNDVCSKPVSKQAISDAIRRWRRNT* # ORIGINAL: g7328.t1 original gene structure, not modified by PASA NODE_438_length_23771_cov_41.8464 AUGUSTUS gene 215 3344 . - . ID=g7328;Name=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS mRNA 215 3344 . - . ID=g7328.t1;Parent=g7328;Name=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 3258 3344 . - . ID=g7328.t1.exon1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 3258 3344 . - 0 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 3032 3082 . - . ID=g7328.t1.exon2;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 3032 3082 . - 0 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 2467 2779 . - . ID=g7328.t1.exon3;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 2467 2779 . - 0 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 2165 2242 . - . ID=g7328.t1.exon4;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 2165 2242 . - 2 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 1777 1866 . - . ID=g7328.t1.exon5;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 1777 1866 . - 2 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 954 1607 . - . ID=g7328.t1.exon6;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 954 1607 . - 2 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 513 618 . - . ID=g7328.t1.exon7;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 513 618 . - 2 ID=cds.g7328.t1;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 215 394 . - . ID=g7328.t1.exon8;Parent=g7328.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 215 394 . - 1 ID=cds.g7328.t1;Parent=g7328.t1 #PROT g7328.t1 g7328 MMNDDDYREKLKTLRLVIGISTERLAALKVELSLQPDPEEPSILREEYDELASRITVLRAEEHNIVLRGIDVSDAPDAHDDGNSSFHSGYSGSRAGNDALYGTEYGLNMGTDPSRLPTLSVDHQFRSKLFMFLATCRICNKQIMKGLKCDGCGYKCHERCRPQVDPMCATQREDHYYKHLLSFPSPAKLNTNHDMRKISSAPDLVDGRSPYDMMVMEPPTPSNGGSSAHSEISDFASLYEGDEDQLSEHYDYQTGESDADDIRGGDDSHTDALGADDDSGAETGGNGDALHVAGGRKPRRRTSSAASRRSIASAGAAAEPNPESDWFRRASRFGSSGAIVGVGDVPAIAVSSASAGGSAVGGIERLESVELSRRDSDDSDDDGLNSSIGSDDWGMNSMTRKQEWEIPYAELVVQERIGAGSFGTVYKGKWHGTVAIKKLNVVNPTEAQLDAFRNEVAVLRKTRHDNIVLFMGACTVLPDLALVTKWCEGSTLYTHIHVKEDPFDLLDIVNIARQIAQGM # ORIGINAL: g7331.t1 original gene structure, not modified by PASA NODE_438_length_23771_cov_41.8464 AUGUSTUS gene 14083 17164 . + . ID=g7331;Name=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS mRNA 14083 17164 . + . ID=g7331.t1;Parent=g7331;Name=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 14083 15557 . + . ID=g7331.t1.exon1;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 14083 15557 . + 0 ID=cds.g7331.t1;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 15780 16764 . + . ID=g7331.t1.exon2;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 15780 16764 . + 1 ID=cds.g7331.t1;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 16875 17027 . + . ID=g7331.t1.exon3;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 16875 17027 . + 0 ID=cds.g7331.t1;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS exon 17138 17164 . + . ID=g7331.t1.exon4;Parent=g7331.t1 NODE_438_length_23771_cov_41.8464 AUGUSTUS CDS 17138 17164 . + 0 ID=cds.g7331.t1;Parent=g7331.t1 #PROT g7331.t1 g7331 MGQSSESRVPAGVAPSHHGTHSGAVRHTSAFCRPLASSQPQGTARGASATSGAGPESNSSAAPQSSGGAGYGPSVETPCAEPAWEWGPVTRPPVCNPNARLTAGLGLFHALWHTHARRRAECADGADCRDAHPDLQTACADDNSLLAGRYRVLGEIGRGTFSRTFRAVDLYYRCCAPWGHVRPDDPSITSGSAHSPDCVAGYDARCNVAIKVMLDEYALIGLHEISRLRTINMFDPARAFSVIGLRDAVSFGASVCLIFDLMSPQALHRYFGHGPTGAPSLTCASPEVVARRFDALRGIASQLLASLSFFESIGVLHADLKPENILVELSHPQALAYAAGAATPAVPLATCPSPFPRVKVIDFGNAMRATLADTEAYLADFEVQSLVYRAPEVLWGLPFTPRIDVWSVGCILAELATGRVLFHATDRRGVAARIGALLGPLPASPLSRGLFAGELADLVAPAASSALTMDQHAARIGRLSAALEVRDFVFLSFMDSLLQPDPALRTSAGRALAHPFLAPLFPFRSVLPATAVGDASGRRYPTVGLEWHLAECALPVTRHAAPTSVLPVSTPAPPRPHQPHSHPMNLPAVTAPTREVTGHLRGISARSRRSLLDFERRQCSNDPTPNTNPNTNPSAAAPSAIAFMSLATQHANTPCPPASVVVGTHPGGDASGGGIISTCDREAGLKRSAECDGVEEWTRRDGEAAVAGGPTKRRRLEGPSLPVQITYGASEEHNGPRVTAETVTTQGAIHDVTAVRDSVIGVDEEVCLVSPRVLSAGSSVGPLCPKLPPDHADSVSMRQSRETSSGEAAPGDGDSVEASVDILIVDDGDDDQDTSIPGGGGGSIGIGVHGIHYPVFSTFAKTPRKSSVVVEEADDVVLL* # PASA_UPDATE: g7330.t1, single gene model update, valid-1, status:[pasa:asmbl_7267,status:12], valid-1 NODE_438_length_23771_cov_41.8464 . gene 10817 13533 . - . ID=g7330;Name=g7330.t1 NODE_438_length_23771_cov_41.8464 . mRNA 10817 13533 . - . ID=g7330.t1;Parent=g7330;Name=g7330.t1 NODE_438_length_23771_cov_41.8464 . exon 13434 13533 . - . ID=g7330.t1.exon1;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . CDS 13434 13533 . - 0 ID=cds.g7330.t1;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . exon 12392 13228 . - . ID=g7330.t1.exon2;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . CDS 12392 13228 . - 2 ID=cds.g7330.t1;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . exon 11978 12135 . - . ID=g7330.t1.exon3;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . CDS 11978 12135 . - 2 ID=cds.g7330.t1;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . exon 10817 11832 . - . ID=g7330.t1.exon4;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . CDS 10852 11832 . - 0 ID=cds.g7330.t1;Parent=g7330.t1 NODE_438_length_23771_cov_41.8464 . three_prime_UTR 10817 10851 . - . ID=g7330.t1.utr3p1;Parent=g7330.t1 #PROT g7330.t1 g7330 MGPRGTTKPRRGVAVDDQDAQTVNPDESTTTTAASAENGTRSRRVRIRYAPSAGAGASAPQDAVPCATADDACVGGDDAGSERLRNKAASDKNKRKRVCGSDDDYGEGHDEHGGPRRRTPAYRGRNQSSRPSPHPTAGGRGSRGAAGVGSPAGPPGGQGQGLPPAVASARGPGRIPRTWEDMSRFARPTSPPAGGSAGARGATVAVPASIVRPSSVTTPSSVAMKEKKRRASRAGPKEARRATLYVQPLSLQDMCINFICDNIAGVESFGPIGTEVQVKLCRRLARIGKLHEDSLRLFLETSLEELHVSNGTSLNVASLRLVPLMCPNLKRLTLSGCGRADDSIIDLLASQCPLLEELSLFETYLVTDEPLVRFFEAHESLTSFSLSWAHLLSGSAIASLARECTNLRTLELRMCGGMSDSVLACIKSLRHLESLVIESPGDLLSDAGLTEALSGCASNLKVVELSDVQQVTALGFIAALEPCVHLETLVLDRSPHVDDACVARIVSRNRLLSRISLRNCVAVTSVTLAMLTRAECRGKLVQLGLGGLAAVTGGAIESFVDAVVDFPNDMDADGNANHAADDADPAVNVEVVRARVRRVAKGKGKASSEAVTTRAGHSGIPPGLPLLSDIDFSWVRDVTDDTVMKLLDGCPRLKRMMLWGCSAVSADLSLAAAWKRGVEVVGALRRADEVD* # PASA_UPDATE: g7329.t1, single gene model update, valid-1, status:[pasa:asmbl_7271,status:12], valid-1 NODE_438_length_23771_cov_41.8464 . gene 4629 10430 . + . ID=g7329;Name=g7329.t1 NODE_438_length_23771_cov_41.8464 . mRNA 4629 10430 . + . ID=g7329.t1;Parent=g7329;Name=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 4629 4723 . + . ID=g7329.t1.exon1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 4629 4723 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 4930 5040 . + . ID=g7329.t1.exon2;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 4930 5040 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 5209 5304 . + . ID=g7329.t1.exon3;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 5209 5304 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 5532 5662 . + . ID=g7329.t1.exon4;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 5532 5662 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 5828 5967 . + . ID=g7329.t1.exon5;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 5828 5967 . + 2 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 6379 6530 . + . ID=g7329.t1.exon6;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 6379 6530 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 6818 6872 . + . ID=g7329.t1.exon7;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 6818 6872 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 7035 7184 . + . ID=g7329.t1.exon8;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 7035 7184 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 7513 7614 . + . ID=g7329.t1.exon9;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 7513 7614 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 7743 7894 . + . ID=g7329.t1.exon10;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 7743 7894 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 8047 8197 . + . ID=g7329.t1.exon11;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 8047 8197 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 8371 8519 . + . ID=g7329.t1.exon12;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 8371 8519 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 8792 8908 . + . ID=g7329.t1.exon13;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 8792 8908 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 9080 9175 . + . ID=g7329.t1.exon14;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 9080 9175 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 9403 9450 . + . ID=g7329.t1.exon15;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 9403 9450 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 9590 9643 . + . ID=g7329.t1.exon16;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 9590 9643 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 9781 9988 . + . ID=g7329.t1.exon17;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 9781 9988 . + 1 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . exon 10186 10430 . + . ID=g7329.t1.exon18;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . CDS 10186 10251 . + 0 ID=cds.g7329.t1;Parent=g7329.t1 NODE_438_length_23771_cov_41.8464 . three_prime_UTR 10252 10430 . + . ID=g7329.t1.utr3p1;Parent=g7329.t1 #PROT g7329.t1 g7329 MASAAFQKQKYPATRRDESVVDDYHGTVVADPWLEDPNAADTKAFVDAQNDVTNTVLAQCETRSKFNERMTELFDYPKYTCPFRRGDYWLYYYNTGLQPQSVLYVQDTLDGPARVLLDPNTLSADGTCALSSTAFSKDGAYIAYGLSDSGSDWQTVHVKAVADGRKLDDVLKWAKFTSLAWTHDNSGFFYNVYYHALGTPQSEDPLIFETTDHPTWMTGVEVSEDGRYLLLTPSDGCDPVNRFYYCELGVDFSVMSVLKRGPLPIAKLIDNFDAQYEYIANEGTRFVFKTNLNAPRYKLLECADITASQPAWKTLVGEHPTDVLEWTAWVNETRLVSCYLHDVKSALELRELRSGDKIADFPLDIGNVVECRSRKEDAEIFYQLTGFLNPGIIYRCDVSGDRPLAPAVFRETPVKGIDPNLMETRQVFVPSKDGTKIPVFIVKRKDVPLDGNNPTLLYGYGGFNISVTPSYSVSRTIFVYHCKGIYAVANIRGGGEYGETWHKAGSLGQKQNCFDDFQACAQFLIDEKYTTPKKIAINGGSNGGLLVGACINQRPDLFGAAIAQVGVMDMLRFHKFTIGHAWTTDYGSSDDPEQFKWLIKYSPVHNVRKGGPYPAVLLMTGDHDDRVVPLHTLKLIAELQHAAPDNDQPILVRVETAAGHGAGKPTKKRIEEAADMFAFINKMTGATWTD* # PASA_UPDATE: g9311.t1, single gene model update, valid-1, status:[pasa:asmbl_7518,status:12], valid-1 NODE_4676_length_1341_cov_40.7362 . gene 103 1328 . + . ID=g9311;Name=g9311.t1 NODE_4676_length_1341_cov_40.7362 . mRNA 103 1328 . + . ID=g9311.t1;Parent=g9311;Name=g9311.t1 NODE_4676_length_1341_cov_40.7362 . five_prime_UTR 103 104 . + . ID=g9311.t1.utr5p1;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . exon 103 248 . + . ID=g9311.t1.exon1;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . CDS 105 248 . + 0 ID=cds.g9311.t1;Parent=g9311.t1;5_prime_partial=true NODE_4676_length_1341_cov_40.7362 . exon 538 595 . + . ID=g9311.t1.exon2;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . CDS 538 595 . + 0 ID=cds.g9311.t1;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . exon 783 835 . + . ID=g9311.t1.exon3;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . CDS 783 835 . + 2 ID=cds.g9311.t1;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . exon 1069 1180 . + . ID=g9311.t1.exon4;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . CDS 1069 1180 . + 0 ID=cds.g9311.t1;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . exon 1309 1328 . + . ID=g9311.t1.exon5;Parent=g9311.t1 NODE_4676_length_1341_cov_40.7362 . CDS 1309 1328 . + 2 ID=cds.g9311.t1;Parent=g9311.t1 #PROT g9311.t1 g9311 SSAPASDSFHGSFGRPGGGAPNRSSSGKVMAQYIIDPEVMGGTSEEPARVPQKHIDPTKASEYRSELDRHVNMRQSLEKVDPREELAFADTIRTTEPKARIPHATDAHERRRNADEKYLENLAPMTLT* # PASA_UPDATE: g10488.t1, single gene model update, valid-1, status:[pasa:asmbl_6665,status:12], valid-1 NODE_3874_length_2584_cov_42.2941 . gene 69 1913 . - . ID=g10488;Name=g10488.t1 NODE_3874_length_2584_cov_42.2941 . mRNA 69 1913 . - . ID=g10488.t1;Parent=g10488;Name=g10488.t1 NODE_3874_length_2584_cov_42.2941 . five_prime_UTR 1764 1913 . - . ID=g10488.t1.utr5p1;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . exon 1601 1913 . - . ID=g10488.t1.exon1;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . CDS 1601 1763 . - 0 ID=cds.g10488.t1;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . exon 946 1067 . - . ID=g10488.t1.exon2;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . CDS 946 1067 . - 2 ID=cds.g10488.t1;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . exon 582 772 . - . ID=g10488.t1.exon3;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . CDS 582 772 . - 0 ID=cds.g10488.t1;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . exon 69 338 . - . ID=g10488.t1.exon4;Parent=g10488.t1 NODE_3874_length_2584_cov_42.2941 . CDS 69 338 . - 1 ID=cds.g10488.t1;Parent=g10488.t1;3_prime_partial=true #PROT g10488.t1 g10488 MAGLFGSALVATALLGVCMMASTTLANVIITTETNVTYTVDSVTATFGPAIPSEGVAGVIYPPTPSDACGPVILNITISRWIALIERGGCDYDVKVRNAQHAGAVGVIVWDSTNGDLVAMYGKNTDDIVIPSTFISRQDGTWLKAVCEQQRATGVMHDSADPTWIVTWPTFILPFVVIVIVSVFMLAFYLVYRRNRRSREQQSTLLAQAEVVTLPVRSFVKGGETDACAICLEDYEDGDQLRVMPCGH # ORIGINAL: g6037.t1 original gene structure, not modified by PASA NODE_3488_length_3348_cov_37.2716 AUGUSTUS gene 2287 3111 . + . ID=g6037;Name=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS mRNA 2287 3111 . + . ID=g6037.t1;Parent=g6037;Name=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS exon 2287 2490 . + . ID=g6037.t1.exon1;Parent=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS CDS 2287 2490 . + 0 ID=cds.g6037.t1;Parent=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS exon 2767 2928 . + . ID=g6037.t1.exon2;Parent=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS CDS 2767 2928 . + 0 ID=cds.g6037.t1;Parent=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS exon 3100 3111 . + . ID=g6037.t1.exon3;Parent=g6037.t1 NODE_3488_length_3348_cov_37.2716 AUGUSTUS CDS 3100 3111 . + 0 ID=cds.g6037.t1;Parent=g6037.t1 #PROT g6037.t1 g6037 MNSGRIAMAAVALALLSLCGAAAGCDGGVPFVGVDWWDLAPGTVKMRVDITEGQSLLFAWKGNHSVVQVSENVFGSDKQCVGGKLMGMQSPLIVDSLNLTVDGSPFYFVSQVPGECPEQRVEHHN* # PASA_UPDATE: g6036.t1, single gene model update, valid-1, status:[pasa:asmbl_6124,status:12], valid-1 NODE_3488_length_3348_cov_37.2716 . gene 74 1750 . + . ID=g6036;Name=g6036.t1 NODE_3488_length_3348_cov_37.2716 . mRNA 74 1750 . + . ID=g6036.t1;Parent=g6036;Name=g6036.t1 NODE_3488_length_3348_cov_37.2716 . five_prime_UTR 74 98 . + . ID=g6036.t1.utr5p1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . exon 74 197 . + . ID=g6036.t1.exon1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . CDS 99 197 . + 0 ID=cds.g6036.t1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . exon 500 607 . + . ID=g6036.t1.exon2;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . CDS 500 607 . + 0 ID=cds.g6036.t1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . exon 882 978 . + . ID=g6036.t1.exon3;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . CDS 882 978 . + 0 ID=cds.g6036.t1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . exon 1150 1222 . + . ID=g6036.t1.exon4;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . CDS 1150 1222 . + 2 ID=cds.g6036.t1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . exon 1535 1750 . + . ID=g6036.t1.exon5;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . CDS 1535 1634 . + 1 ID=cds.g6036.t1;Parent=g6036.t1 NODE_3488_length_3348_cov_37.2716 . three_prime_UTR 1635 1750 . + . ID=g6036.t1.utr3p1;Parent=g6036.t1 #PROT g6036.t1 g6036 MRGIEEQKRMFMVGFNEFVPQNLIKMFDERELEMLIGGIADIDINDWRTYTDYKNGYAEGHAVVSWFWKAVASFDNEMKARLLQFVTGTSRVPMNGFRDLHGSDGPRKFCIEKWGRPDQLPRSHTCFNRIDLPPYADYRQLREKLILAIENTSGFAIE* # PASA_UPDATE: g4040.t1, single gene model update, valid-1, status:[pasa:asmbl_7158,status:12], valid-1 NODE_4264_length_1912_cov_38.9668 . gene 76 1683 . - . ID=g4040;Name=g4040.t1 NODE_4264_length_1912_cov_38.9668 . mRNA 76 1683 . - . ID=g4040.t1;Parent=g4040;Name=g4040.t1 NODE_4264_length_1912_cov_38.9668 . exon 1641 1683 . - . ID=g4040.t1.exon1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . CDS 1641 1683 . - 0 ID=cds.g4040.t1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . exon 1310 1412 . - . ID=g4040.t1.exon2;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . CDS 1310 1412 . - 2 ID=cds.g4040.t1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . exon 1023 1171 . - . ID=g4040.t1.exon3;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . CDS 1023 1171 . - 1 ID=cds.g4040.t1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . exon 527 723 . - . ID=g4040.t1.exon4;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . CDS 527 723 . - 2 ID=cds.g4040.t1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . exon 76 225 . - . ID=g4040.t1.exon5;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . CDS 184 225 . - 0 ID=cds.g4040.t1;Parent=g4040.t1 NODE_4264_length_1912_cov_38.9668 . three_prime_UTR 76 183 . - . ID=g4040.t1.utr3p1;Parent=g4040.t1 #PROT g4040.t1 g4040 MLAAGTPINVCTDEGVTALHNACCNGHGRTVDLLVTSGADVNAADADGWTPLHSAACLGTLDIVAFLIEHGANVSAVNAEGQMASELAEEAEITEKLQDAEKDLTIAKALYALYHYDAVNDDEVSFRANDILIIMERETGEEDWWMCQSRKDGKKGLVPKNYLGAHKLTPARVKLMG* # ORIGINAL: g5358.t1 original gene structure, not modified by PASA NODE_3229_length_3961_cov_38.245 AUGUSTUS gene 1 3677 . - . ID=g5358;Name=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS mRNA 1 3677 . - . ID=g5358.t1;Parent=g5358;Name=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS exon 2482 3677 . - . ID=g5358.t1.exon1;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS CDS 2482 3677 . - 0 ID=cds.g5358.t1;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS exon 1466 2210 . - . ID=g5358.t1.exon2;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS CDS 1466 2210 . - 1 ID=cds.g5358.t1;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS exon 1079 1244 . - . ID=g5358.t1.exon3;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS CDS 1079 1244 . - 0 ID=cds.g5358.t1;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS exon 551 799 . - . ID=g5358.t1.exon4;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS CDS 551 799 . - 2 ID=cds.g5358.t1;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS exon 1 219 . - . ID=g5358.t1.exon5;Parent=g5358.t1 NODE_3229_length_3961_cov_38.245 AUGUSTUS CDS 1 219 . - 2 ID=cds.g5358.t1;Parent=g5358.t1 #PROT g5358.t1 g5358 MLREGVCLDLRMTDQVLVGPIAAILKRLAAEADAEWASCAEEYAAQLIEGKEERTATKGRDSEVASSSSLTLEDILDDEGLGVPVDVMTMANIATACVERQNELLFERIRSSTELEGLAPGIGPAIVERMRACCIICESARDSKSCEDSYRTAVAARVRRHHPILADSEEWVAMRVGEHLRRRTLRQAEAGREMSVLSAAIQRLRDAGLEAYASLIEIDRDFLSTSGESQLCPLRRMKHAPVVHTVRVPILRARNYRVTELVVAGNNNSNTNSSKTLGRLRRRGSDGMPNIQRIYTLDTYYPVTVSTVELAWRWRLSGVRLWSFLLFLVRIFIISGILSSTFGIRGLFSAGEFATSVRIDEMTGCLVQSGRHRVRPLWVRLKAIAGYRRRTESPAAVPRVPSRAKPSFESTVSLLSAFKWVASAVWTFIYGTIFATSFTLLCVLNIATCVTLFVIAVACAPFATMICTFVIACWRDSDANMSEPPNFPLARALLVDIVIRGALQLVASVSFAVVGCPLAAATVAIYAGVEWLLSTIRDVLFLHFVLRPLGYIPTGDAWYATRVGGPDMLPNLPYRLRPEHALAALRVAMESEEITMWEVSVEKIATAPLDECVQFEREYLSCLGLRLAWTHKSFRRLKENVETNINKVHAEAAKWRAARGQEAEDVPIRNRSHLSTRDLAMTMAVGTKMTEEFFSARIFPRFASNDDVTAFWAMRALPEGDWEGLSRKLICRVLGDPIVRPLASHEVYVPVAVDPQLLCDYTRILTNSLLDPDFLPVTRSSGSNLDSADEVSESTRQRLSLSNRLWMQPLLAILDDASVVCKARPEMGFVVVFNGNGADAGAAQLHHLPFGGLMARLD # ORIGINAL: g7522.t1 original gene structure, not modified by PASA NODE_2375_length_6510_cov_39.1808 AUGUSTUS gene 129 1640 . - . ID=g7522;Name=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS mRNA 129 1640 . - . ID=g7522.t1;Parent=g7522;Name=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 1547 1640 . - . ID=g7522.t1.exon1;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 1547 1640 . - 0 ID=cds.g7522.t1;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 1254 1415 . - . ID=g7522.t1.exon2;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 1254 1415 . - 2 ID=cds.g7522.t1;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 967 1041 . - . ID=g7522.t1.exon3;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 967 1041 . - 2 ID=cds.g7522.t1;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 737 834 . - . ID=g7522.t1.exon4;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 737 834 . - 2 ID=cds.g7522.t1;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 129 458 . - . ID=g7522.t1.exon5;Parent=g7522.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 129 458 . - 0 ID=cds.g7522.t1;Parent=g7522.t1 #PROT g7522.t1 g7522 MTPIQTRGDTCNWLSSNITLCSRVENCSVTKQALAGDAALASGSPPADEDGDEYEYEYDDTNDKALLEAAKSGLVEEVRRLIDDEGADMVYQSPESGLTPLHAAAAGGGLDVVNLLLELGHPYNLVDGAKRTAAELAADNGHTAIYERLMDEGIRAELILSVLERKRKRAPEEADGDAPQKVAPAPNKSYLEQPLKYSEGKLLDAESNGVMMGWELPLMVRHAETIAPREGLDVLNIGFGLGLIDIELQKSK* # ORIGINAL: g7523.t1 original gene structure, not modified by PASA NODE_2375_length_6510_cov_39.1808 AUGUSTUS gene 4126 6374 . - . ID=g7523;Name=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS mRNA 4126 6374 . - . ID=g7523.t1;Parent=g7523;Name=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 6253 6374 . - . ID=g7523.t1.exon1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 6253 6374 . - 0 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 6004 6094 . - . ID=g7523.t1.exon2;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 6004 6094 . - 1 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 5489 5566 . - . ID=g7523.t1.exon3;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 5489 5566 . - 0 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 5202 5303 . - . ID=g7523.t1.exon4;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 5202 5303 . - 0 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 4744 4856 . - . ID=g7523.t1.exon5;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 4744 4856 . - 0 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 4394 4466 . - . ID=g7523.t1.exon6;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 4394 4466 . - 1 ID=cds.g7523.t1;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS exon 4126 4167 . - . ID=g7523.t1.exon7;Parent=g7523.t1 NODE_2375_length_6510_cov_39.1808 AUGUSTUS CDS 4126 4167 . - 0 ID=cds.g7523.t1;Parent=g7523.t1 #PROT g7523.t1 g7523 MLPDLLAPAFRGRRPFTNEEITALLDRPGGSQVKTILNPSDTLGPDLWSNTTVIRDLDEDEEDTFHIDKLKEIDFLHLHPMKIKELAQELLKEAEPWVAPDAEQVLKFRTRSYLTSVRGENAKKERKVQLKVRLEDLPIQTEHEKELFLELVQQRYNAETGVLTLNSERFPKRHQNRGYLLYVLKRIVDASREGAKYRNKIAQATA* # PASA_UPDATE: g13505.t1, single gene model update, valid-1, status:[pasa:asmbl_3148,status:12], valid-1 NODE_1976_length_8237_cov_40.227 . gene 129 2942 . + . ID=g13505;Name=g13505.t1 NODE_1976_length_8237_cov_40.227 . mRNA 129 2942 . + . ID=g13505.t1;Parent=g13505;Name=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 129 213 . + . ID=g13505.t1.exon1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 129 213 . + 0 ID=cds.g13505.t1;Parent=g13505.t1;5_prime_partial=true NODE_1976_length_8237_cov_40.227 . exon 541 647 . + . ID=g13505.t1.exon2;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 541 647 . + 2 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 1022 1159 . + . ID=g13505.t1.exon3;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 1022 1159 . + 0 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 1300 1368 . + . ID=g13505.t1.exon4;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 1300 1368 . + 0 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 1603 1770 . + . ID=g13505.t1.exon5;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 1603 1770 . + 0 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 2003 2158 . + . ID=g13505.t1.exon6;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 2003 2158 . + 0 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . exon 2409 2942 . + . ID=g13505.t1.exon7;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . CDS 2409 2549 . + 0 ID=cds.g13505.t1;Parent=g13505.t1 NODE_1976_length_8237_cov_40.227 . three_prime_UTR 2550 2942 . + . ID=g13505.t1.utr3p1;Parent=g13505.t1 #PROT g13505.t1 g13505 DIEAKWAQILAAVEGRDGAIEAEAGRQQANESLRVCFADAANAFGAWIEEQKASISQGFTGKSEDQLAALAQQEQTILAKGSEFEAVDNISHDVEEALVFDNKHTQYSMEVLRFEWDSLRSLIRRSVNEMQNQILARDMSGITEEQLQEYRQSFSHFDKDKSGSLDRLEFRSALLSLGFSLPDAKHGEAEPEFDRILAKVDPGQTGRVAFDAFVDFMRAENADADSPEQLIESFKILAGDKAYITEDDMRRDLSPAQVAYCVRRMQAYPGVEGAFDYKSFTNQVYGH* # ORIGINAL: g13506.t1 original gene structure, not modified by PASA NODE_1976_length_8237_cov_40.227 AUGUSTUS gene 4090 8076 . - . ID=g13506;Name=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS mRNA 4090 8076 . - . ID=g13506.t1;Parent=g13506;Name=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS exon 6272 8076 . - . ID=g13506.t1.exon1;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS CDS 6272 8076 . - 2 ID=cds.g13506.t1;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS exon 5760 6053 . - . ID=g13506.t1.exon2;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS CDS 5760 6053 . - 0 ID=cds.g13506.t1;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS exon 4782 4900 . - . ID=g13506.t1.exon3;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS CDS 4782 4900 . - 0 ID=cds.g13506.t1;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS exon 4090 4519 . - . ID=g13506.t1.exon4;Parent=g13506.t1 NODE_1976_length_8237_cov_40.227 AUGUSTUS CDS 4090 4519 . - 1 ID=cds.g13506.t1;Parent=g13506.t1 #PROT g13506.t1 g13506 VLEHLIIGDDARCIRHCNDVFGTFLDVLLEDPSTSGLDVRGVRIDALTCQDLLRRMLSVIPHFEREHRDVIERLGDCEYTQVPPRMRALALETICEASLGTQRFLRAMEEVDEAVADDAKLCEELHVSEHRLLCNLRRASQFPIDVRETNMRTIQTDIDSVQNALRVATARMAPKTRVVRVEALGMDRSHNTYYLLESVGGIVVHSGRETVDAIQRYADDLCDMAYDKNRKMEWVDAEDVDGEGDDHVSGNVDRAEGADAFSEISGGVVDGNGVEAAHVTDKDSSEHDFNAAAGSEDVSDAHAHAHAQDEDRDGDGDGDGDGEGPVAGLWRLDTSGTAGATGPADKNAAKTKKSRPRARSVRRLAQTSALPLVCNEYNGVTADELRAMCEAMKTVSPLRSLDVRNCSWGVIVPSEGDTSEATLDRVIAALDVRGVREYALSRAICVNKERALGALSRGAVSAKIRRDFLADNVASDIVLRGEDATEWLVSQMRKTLLDKEDELYKTDAFTSEYVSSRAHTRASLSPRSTSVGLVECARFAHAVSAGFQHGLLRGRFQHNQLKHWQAEVVNSARTKTIARLAVMWSLLVGEIKKDRKIPTKAQATRQASAHAAATSAATATATVTAKADCVTSPSAVKYLNEGDTGNDVDEADGHVNVCRVCGEVGILVMCDECPCAYHVQCVDLKSVPKGDWKCPSCALRTTYHPVVWARVKGFPWWPARVFNRNKKYLSVHFFGTHDITTLHESHTVAYGKNPPEGKKSTDPQLAKALEEVALFVAYHTAAGTIPTIIADESDGNLSANTEQSTEQLTPNTCATVSSPVAADLRSAERSATASPVSVRAITVSSPISTAPTAVTSSPVTTAASTVTVGPPVPATECITID* # ORIGINAL: g2835.t1 original gene structure, not modified by PASA NODE_8653_length_361_cov_47.1538_potentialcontaminant AUGUSTUS gene 1 361 . - . ID=g2835;Name=g2835.t1 NODE_8653_length_361_cov_47.1538_potentialcontaminant AUGUSTUS mRNA 1 361 . - . ID=g2835.t1;Parent=g2835;Name=g2835.t1 NODE_8653_length_361_cov_47.1538_potentialcontaminant AUGUSTUS exon 1 361 . - . ID=g2835.t1.exon1;Parent=g2835.t1 NODE_8653_length_361_cov_47.1538_potentialcontaminant AUGUSTUS CDS 1 361 . - 1 ID=cds.g2835.t1;Parent=g2835.t1 #PROT g2835.t1 g2835 SNANGNSNTNGVSVDSDALVIAADVELPILLVGRGAGYNAPSGTKNENTNAVGSSNANGNENTNTVGVDGDILAIAADVVIPIDLRRRRGAPSGGKNENTNAVGSSNANGNSNTNGVSVD # PASA_UPDATE: g9028.t1, single gene model update, valid-1, status:[pasa:asmbl_6915,status:12], valid-1 NODE_4063_length_2254_cov_58.6393 . gene 130 892 . - . ID=g9028;Name=g9028.t1 NODE_4063_length_2254_cov_58.6393 . mRNA 130 892 . - . ID=g9028.t1;Parent=g9028;Name=g9028.t1 NODE_4063_length_2254_cov_58.6393 . five_prime_UTR 827 892 . - . ID=g9028.t1.utr5p1;Parent=g9028.t1 NODE_4063_length_2254_cov_58.6393 . exon 584 892 . - . ID=g9028.t1.exon1;Parent=g9028.t1 NODE_4063_length_2254_cov_58.6393 . CDS 584 826 . - 0 ID=cds.g9028.t1;Parent=g9028.t1 NODE_4063_length_2254_cov_58.6393 . exon 130 228 . - . ID=g9028.t1.exon2;Parent=g9028.t1 NODE_4063_length_2254_cov_58.6393 . CDS 130 228 . - 0 ID=cds.g9028.t1;Parent=g9028.t1 #PROT g9028.t1 g9028 MHMPTLVRMCRSVHASSRQLVTAYVMGMRVDVYKYSNGIAAVRATAVRCASTATMRAVVLSKVNGPLNVTDVPKPKAGAKQVVVRVAACAVCHRDLLDRKGAFPFMKTPIVPG* # ORIGINAL: g2812.t1 original gene structure, not modified by PASA NODE_5585_length_792_cov_634.583_potentialcontaminant AUGUSTUS gene 227 792 . - . ID=g2812;Name=g2812.t1 NODE_5585_length_792_cov_634.583_potentialcontaminant AUGUSTUS mRNA 227 792 . - . ID=g2812.t1;Parent=g2812;Name=g2812.t1 NODE_5585_length_792_cov_634.583_potentialcontaminant AUGUSTUS exon 227 792 . - . ID=g2812.t1.exon1;Parent=g2812.t1 NODE_5585_length_792_cov_634.583_potentialcontaminant AUGUSTUS CDS 227 792 . - 2 ID=cds.g2812.t1;Parent=g2812.t1 #PROT g2812.t1 g2812 RLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARPPRLELGHGLGLELGLGLGLAPPGARQKLKVTV* # PASA_UPDATE: g6362.t1, single gene model update, valid-1, status:[pasa:asmbl_6979,status:12], valid-1 NODE_4108_length_2176_cov_36.7911 . gene 87 2016 . - . ID=g6362;Name=g6362.t1 NODE_4108_length_2176_cov_36.7911 . mRNA 87 2016 . - . ID=g6362.t1;Parent=g6362;Name=g6362.t1 NODE_4108_length_2176_cov_36.7911 . five_prime_UTR 2016 2016 . - . ID=g6362.t1.utr5p1;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . exon 1900 2016 . - . ID=g6362.t1.exon1;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . CDS 1900 2015 . - 0 ID=cds.g6362.t1;Parent=g6362.t1;5_prime_partial=true NODE_4108_length_2176_cov_36.7911 . exon 1459 1536 . - . ID=g6362.t1.exon2;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . CDS 1459 1536 . - 1 ID=cds.g6362.t1;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . exon 919 1035 . - . ID=g6362.t1.exon3;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . CDS 919 1035 . - 1 ID=cds.g6362.t1;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . exon 490 608 . - . ID=g6362.t1.exon4;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . CDS 490 608 . - 1 ID=cds.g6362.t1;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . exon 87 262 . - . ID=g6362.t1.exon5;Parent=g6362.t1 NODE_4108_length_2176_cov_36.7911 . CDS 87 262 . - 2 ID=cds.g6362.t1;Parent=g6362.t1;3_prime_partial=true #PROT g6362.t1 g6362 SEPGAFGYIHPLDGLSGRLHFVPSLLHVVLVLILNRIYRGVAMHLTEWENYRTVSEHEDALIFKRFLFESLDCYLPLLYVGFIRRDVGLLHEMLTSLHLAEEIRRVITETAIPWLMKQHRVRSKGRALAHTKKADGGTAPPQTELTQVQKEDGFAAYSTFDDYLEMVMQFGYVCLFAAAHPLAAVFCLAANWFEIRSDFYKV # ORIGINAL: g2653.t1 original gene structure, not modified by PASA NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS gene 29 6030 . + . ID=g2653;Name=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS mRNA 29 6030 . + . ID=g2653.t1;Parent=g2653;Name=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 29 2222 . + . ID=g2653.t1.exon1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 29 2222 . + 0 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 2373 2536 . + . ID=g2653.t1.exon2;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 2373 2536 . + 2 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 2933 2956 . + . ID=g2653.t1.exon3;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 2933 2956 . + 0 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 3130 3372 . + . ID=g2653.t1.exon4;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 3130 3372 . + 0 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 3556 3622 . + . ID=g2653.t1.exon5;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 3556 3622 . + 0 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 3812 3916 . + . ID=g2653.t1.exon6;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 3812 3916 . + 2 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 4156 4382 . + . ID=g2653.t1.exon7;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 4156 4382 . + 2 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 4523 4602 . + . ID=g2653.t1.exon8;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 4523 4602 . + 0 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 4749 4813 . + . ID=g2653.t1.exon9;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 4749 4813 . + 1 ID=cds.g2653.t1;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS exon 4994 6030 . + . ID=g2653.t1.exon10;Parent=g2653.t1 NODE_1887_length_8734_cov_63.9954_potentialcontaminant AUGUSTUS CDS 4994 6030 . + 2 ID=cds.g2653.t1;Parent=g2653.t1 #PROT g2653.t1 g2653 MACADGDTSAGIDVSGDASVVVVLTNITLSGCSGSALRVGGLAKVTAVGALFADNEGENGGAARVSNSSHFECIGCVFTGNRVTGAGGAVCASGASTVVLRDSLLSNNAAVDAGGGMALGDAARALLSGSVLANNIAGSGGAIAARGPNVALTWIDTTVSSNSASFGGGLYISGPGALVDAHGGACVLNSARTGGCAHIELSGNATFQQCSIDRNTASDAGGALYAVGAATSVLLDGATATNNGVTGGAGGMLYGQQAKVTVRGSAIERNAASDTGGAFMVVSGASLVMSYSTCRWNHGNVDGACVSARGSVALTMSHVNIDFNYGRASAINVWNRSHLRMSLCTCSGNIAQTVYPGCMSVFSSAAVVDATNFTANTAQAYITALLIDTDGRANVSQSLFADNYPFAAVGTWNSGFMRLSECTFTNNTGETGGALRMSQTAMTIVLSSRFVGNRASAGGGAVYVQDDAQLWMYDSSLVANIADGDGGGGAVVVTRMGRFAAERCTFNGNLAAQDMSVGGALAFSPSSPDGAVGMLDCEFLGNTAHFGRDLHTSNVSRALRVGVDLFGCVFHDTEGAMSTPPASIQLTPTLAPAAKSSAIVLTLASGGVLPDMFVSAYDAYDQRIVPSTLEVLLLEVSVQPLFGRAITASRLQGETVTAVLEREVRLADLRVLATPGDYSIVVASASPIYDKSVFVASLPLTVLPCSHGLYPSTEVIDGESYAVCKVAPATSGRLSTGVFAVIPAVVVVVAAAIGVFYWRHKKAIERESRSYEVNFHELTFGILLGRGTYGNVYLGTFRGSHVAIKTLCIKGVDVAPITRRFTNDAAAGESHSLLQQSLVLDVNGGAARTPAHDARNNRPQIPPPAFNAAIAGFMKEVRTMSALRHPNIALLLAASVQYPELAIVVELMARGSLYDVYRNAQIKMDWKLKVSMARGLAYLHASNPPICEYDAMHSTEEIQHSSGRVKRTFTVKMDALNVLEIYVFVFFTADHLDLKSLNLFVDQAMRIKVGDFGLAQLKRPDSDKLDVGRTGTILWMAPEVIVGSLFSGDKADVFSYGVVLSEILCRKLPHNTVKCTRNEIAVLVTRYYLRPYVPPYCPDEWHALMAASWDHDPLKRPSFTEILSHIEAFRPSEWQEPGEAALRTPNLLRLSEDSLDSSSSIDTEGDTNNHYGADCSMVAQGDISRGDNTYGAPENTASEGWKGAVRLMTLGDNVRLHGIDVARPAVPKTGSTAAHSTDTRENTASEGWNGAVRLQVITNNDNQVHYVGMRSPGAPAVDPEGQLDSHGARTKDTLYEGFRNGVKVRLEPLRNGPAFSSPHVTQFQPSISHGHSSAQSDRYVHQPLSVSLQQRHMEVPVFERMRNRVSNGSRPGHSVAAPIGAPQKSLVEGMPEESEPLLSDQ* # ORIGINAL: g2170.t1 original gene structure, not modified by PASA NODE_2447_length_6212_cov_41.2747_potentialcontaminant AUGUSTUS gene 5074 5346 . - . ID=g2170;Name=g2170.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant AUGUSTUS mRNA 5074 5346 . - . ID=g2170.t1;Parent=g2170;Name=g2170.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant AUGUSTUS exon 5074 5346 . - . ID=g2170.t1.exon1;Parent=g2170.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant AUGUSTUS CDS 5074 5346 . - 0 ID=cds.g2170.t1;Parent=g2170.t1 #PROT g2170.t1 g2170 MSYQKIDVQSSLDRAAPWLRFAVQNRMGMKYAPEIRFILDDSEERLRGISDIIAKATAQDRKIEEHKAKVAAMAALHDADAVQMDSVHRV* # PASA_UPDATE: g2169.t1, single gene model update, valid-1, status:[pasa:asmbl_4328,status:12], valid-1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . gene 4 3662 . - . ID=g2169;Name=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . mRNA 4 3662 . - . ID=g2169.t1;Parent=g2169;Name=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . five_prime_UTR 3151 3662 . - . ID=g2169.t1.utr5p1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 3063 3662 . - . ID=g2169.t1.exon1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 3063 3150 . - 0 ID=cds.g2169.t1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 2332 2646 . - . ID=g2169.t1.exon2;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 2332 2646 . - 2 ID=cds.g2169.t1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 1705 2037 . - . ID=g2169.t1.exon3;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 1705 2037 . - 2 ID=cds.g2169.t1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 1093 1476 . - . ID=g2169.t1.exon4;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 1093 1476 . - 2 ID=cds.g2169.t1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 529 846 . - . ID=g2169.t1.exon5;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 529 846 . - 2 ID=cds.g2169.t1;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . exon 4 146 . - . ID=g2169.t1.exon6;Parent=g2169.t1 NODE_2447_length_6212_cov_41.2747_potentialcontaminant . CDS 4 146 . - 2 ID=cds.g2169.t1;Parent=g2169.t1;3_prime_partial=true #PROT g2169.t1 g2169 MGQTKLTNVRMRVLVSAALVCCLAGSSLAGTLEDEVWGAGSSFTATDKGSGTVNVVFSPISPTSPVVTTVSKYLVSVDDGVAVPLSPSTTTYDFKNLLGNATHVFNLQVEVLISGVVTIVDSPQSGIAVDVAPYGILWNSVPLAGKAIPNPAIFPTIATVTIDMNRFFRASTGAASLILNSPLKTLGYRCPGASSDTNLDITLSSWKVTCTTVTITCGSSANVTVKATGTVGATASATLSVSGLCHTSWSGKALTFTNRATNAFDISVPYPSAIGSGTLFVAHIYNWDGTTATFLTTSCNSIPSNPGDNTTLSVPEGRTETLAAGKSYRVKFFALVADMDSSTFCTASTPTDPTGAMTINTQYLVGTINTTGENPKWTGSATTSVVRNADSRQLLLTWPKPSFVGSFVAYNVTVVVKDMKTSIVSAPSAVGTPITNVNTLSVLSTMQPSKNYTFTITATSTWDSVRYSSAVTAQEIIGNAYVWPAASNAIVFASTSSALEANRTADPSMAPSDYNVTVTVTGPGGFY # PASA_UPDATE: g1230.t1, single gene model update, valid-1, status:[pasa:asmbl_3786,status:12], valid-1 NODE_2212_length_7237_cov_39.4324 . gene 4708 7090 . - . ID=g1230;Name=g1230.t1 NODE_2212_length_7237_cov_39.4324 . mRNA 4708 7090 . - . ID=g1230.t1;Parent=g1230;Name=g1230.t1 NODE_2212_length_7237_cov_39.4324 . five_prime_UTR 6950 7090 . - . ID=g1230.t1.utr5p1;Parent=g1230.t1 NODE_2212_length_7237_cov_39.4324 . exon 6760 7090 . - . ID=g1230.t1.exon1;Parent=g1230.t1 NODE_2212_length_7237_cov_39.4324 . CDS 6760 6949 . - 0 ID=cds.g1230.t1;Parent=g1230.t1 NODE_2212_length_7237_cov_39.4324 . exon 4708 6313 . - . ID=g1230.t1.exon2;Parent=g1230.t1 NODE_2212_length_7237_cov_39.4324 . CDS 4959 6313 . - 2 ID=cds.g1230.t1;Parent=g1230.t1 NODE_2212_length_7237_cov_39.4324 . three_prime_UTR 4708 4958 . - . ID=g1230.t1.utr3p1;Parent=g1230.t1 #PROT g1230.t1 g1230 MCVFLGWIICALEGGSSHELTYMQSLFYATSAISQTGLAPTDFSKFHVISQLTLMLCMIVGSPVLMSLAPVLLRRYIYRERLDAWGLTKKDRTFVLEYSALKYLTRVIVGYFFCVQFFIFLLLLIYATSSSYAKEILSRDGIAPGYFALFHCVSSFHNAGFALFTLNFIPFDRSPFPLFVICLSVLLGNTGYPLAIRLVIKILHRFSKPGEVKETYAYLLAHPRRCYTHLFPAPDTRWLLTVLILLNLIEFSVFLGLDWNSDVLVKFSTGDKIVNGIFTVVTTRTAGFNSVDTGMIEPGMLTLTFAMMYISSTPVTVAVRNTMAEQLDGEDNELPGDMNDETVAKFQRAAQADAKAHAKKALTQDILYLITGLIIITSLEDQQLDSDPAGFNIFKIMFEICSAYGTVGLSMGAPGKTYAFSGAWRPGSQLVLIGIMIIGRHRGLPYAIDRTVNVPLKLRWRTGHEEKKPKKKTMPLRPDQIATGGMGNEHLNDASKEDSHKYDEDNLKDVQIDS* # PASA_UPDATE: g1228.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3782,status:3], valid-1 # PASA_UPDATE: g1228.t1, single gene model update, valid-1, status:[pasa:asmbl_3783,status:3], valid-1 NODE_2212_length_7237_cov_39.4324 . gene 235 2446 . + . ID=g1228;Name=g1228.t1 NODE_2212_length_7237_cov_39.4324 . mRNA 235 2446 . + . ID=g1228.t1.1.5b6be70b;Parent=g1228;Name=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 235 492 . + . ID=g1228.t1.1.5b6be70b.exon1;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 235 492 . + 0 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 754 942 . + . ID=g1228.t1.1.5b6be70b.exon2;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 754 942 . + 0 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 1155 1310 . + . ID=g1228.t1.1.5b6be70b.exon3;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 1155 1310 . + 0 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 1517 1651 . + . ID=g1228.t1.1.5b6be70b.exon4;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 1517 1651 . + 0 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 1799 1901 . + . ID=g1228.t1.1.5b6be70b.exon5;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 1799 1901 . + 0 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 2065 2130 . + . ID=g1228.t1.1.5b6be70b.exon6;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 2065 2130 . + 2 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 2294 2446 . + . ID=g1228.t1.1.5b6be70b.exon7;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 2294 2376 . + 2 ID=cds.g1228.t1.1.5b6be70b;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . three_prime_UTR 2377 2446 . + . ID=g1228.t1.1.5b6be70b.utr3p1;Parent=g1228.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . mRNA 235 2446 . + . ID=g1228.t1;Parent=g1228;Name=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 235 492 . + . ID=g1228.t1.exon1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 235 492 . + 0 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 754 942 . + . ID=g1228.t1.exon2;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 754 942 . + 0 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 1155 1310 . + . ID=g1228.t1.exon3;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 1155 1310 . + 0 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 1517 1651 . + . ID=g1228.t1.exon4;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 1517 1651 . + 0 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 1799 1901 . + . ID=g1228.t1.exon5;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 1799 1901 . + 0 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . exon 2065 2446 . + . ID=g1228.t1.exon6;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . CDS 2065 2195 . + 2 ID=cds.g1228.t1;Parent=g1228.t1 NODE_2212_length_7237_cov_39.4324 . three_prime_UTR 2196 2446 . + . ID=g1228.t1.utr3p1;Parent=g1228.t1 #PROT g1228.t1.1.5b6be70b g1228 MCTFAVPVVPSFVVELRHFLGSAHEPYRVVSAAALSEVLRRGCSKYPEQIEPIVNGLLARVGDESRDVRRLSLGGLGAIATFPDSLVRKYATAVLTALVAGLDDRADDGDVVILSAMESLSKLTTRLTEADLRSMLVGICLRIRPCFDRSNDSVRAASISLFGRLSVFGVAASHNPYAEQAEAGFIALVIRLNDTTVSVRQASRETLLKTAPFLESPELVTFLQHSLCEGAVVEYPEFIAQLSKAIIDHFGDRLAVFVMAIVAYFRMESDRMRGNAALFVGHIVGSLPQPLRKIVTADHICQALIALLKDPSPLVRQRAAEAMSLLHDY* #PROT g1228.t1 g1228 MCTFAVPVVPSFVVELRHFLGSAHEPYRVVSAAALSEVLRRGCSKYPEQIEPIVNGLLARVGDESRDVRRLSLGGLGAIATFPDSLVRKYATAVLTALVAGLDDRADDGDVVILSAMESLSKLTTRLTEADLRSMLVGICLRIRPCFDRSNDSVRAASISLFGRLSVFGVAASHNPYAEQAEAGFIALVIRLNDTTVSVRQASRETLLKTAPFLESPELVTFLQHSLCEGAVVEYPEFIAQLSKAIIDHFGDRLAVFVMAIVAYFRMESDRMRGNAALFVGHIVGSLPQPLRKIVTADHICQGELSSSSLWVCVCGCCFAILH* # PASA_UPDATE: g1229.t1, single gene model update, valid-1, status:[pasa:asmbl_3784,status:3], valid-1 # PASA_UPDATE: g1229.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3785,status:12], valid-1 NODE_2212_length_7237_cov_39.4324 . gene 2950 4345 . + . ID=g1229;Name=g1229.t1 NODE_2212_length_7237_cov_39.4324 . mRNA 2950 4345 . + . ID=g1229.t1;Parent=g1229;Name=g1229.t1 NODE_2212_length_7237_cov_39.4324 . five_prime_UTR 2950 2990 . + . ID=g1229.t1.utr5p1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . five_prime_UTR 3277 3291 . + . ID=g1229.t1.utr5p2;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . exon 2950 2990 . + . ID=g1229.t1.exon1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . exon 3277 3383 . + . ID=g1229.t1.exon2;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . CDS 3292 3383 . + 0 ID=cds.g1229.t1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . exon 3624 3862 . + . ID=g1229.t1.exon3;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . CDS 3624 3862 . + 1 ID=cds.g1229.t1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . exon 4217 4345 . + . ID=g1229.t1.exon4;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . CDS 4217 4245 . + 2 ID=cds.g1229.t1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . three_prime_UTR 4246 4345 . + . ID=g1229.t1.utr3p1;Parent=g1229.t1 NODE_2212_length_7237_cov_39.4324 . mRNA 2950 4345 . + . ID=g1229.t1.1.5b6be70b;Parent=g1229;Name=g1229.t1 NODE_2212_length_7237_cov_39.4324 . five_prime_UTR 2950 2990 . + . ID=g1229.t1.1.5b6be70b.utr5p1;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . five_prime_UTR 3285 3291 . + . ID=g1229.t1.1.5b6be70b.utr5p2;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 2950 2990 . + . ID=g1229.t1.1.5b6be70b.exon1;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 3285 3383 . + . ID=g1229.t1.1.5b6be70b.exon2;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 3292 3383 . + 0 ID=cds.g1229.t1.1.5b6be70b;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 3624 3862 . + . ID=g1229.t1.1.5b6be70b.exon3;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 3624 3862 . + 1 ID=cds.g1229.t1.1.5b6be70b;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . exon 4217 4345 . + . ID=g1229.t1.1.5b6be70b.exon4;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . CDS 4217 4245 . + 2 ID=cds.g1229.t1.1.5b6be70b;Parent=g1229.t1.1.5b6be70b NODE_2212_length_7237_cov_39.4324 . three_prime_UTR 4246 4345 . + . ID=g1229.t1.1.5b6be70b.utr3p1;Parent=g1229.t1.1.5b6be70b #PROT g1229.t1 g1229 MAKEKGKRRTAIADVVTREYTINLHKRTHSVGFKHRAPRAISEIRKFAEKAMGTKDVRIDTRVNKEVWSNGVRNVPFRVRVRLARRRNDDEDSANKLYTLVTFIPVTSFKGLETKQVEE* #PROT g1229.t1.1.5b6be70b g1229 MAKEKGKRRTAIADVVTREYTINLHKRTHSVGFKHRAPRAISEIRKFAEKAMGTKDVRIDTRVNKEVWSNGVRNVPFRVRVRLARRRNDDEDSANKLYTLVTFIPVTSFKGLETKQVEE* # PASA_UPDATE: g10715.t1, single gene model update, valid-1, status:[pasa:asmbl_6556,status:12],[pasa:asmbl_6557,status:13], valid-1 NODE_3799_length_2727_cov_36.5671 . gene 31 2282 . - . ID=g10715;Name=g10715.t1 NODE_3799_length_2727_cov_36.5671 . mRNA 31 2282 . - . ID=g10715.t1;Parent=g10715;Name=g10715.t1 NODE_3799_length_2727_cov_36.5671 . five_prime_UTR 1970 2282 . - . ID=g10715.t1.utr5p1;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . exon 1850 2282 . - . ID=g10715.t1.exon1;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . CDS 1850 1969 . - 0 ID=cds.g10715.t1;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . exon 672 1578 . - . ID=g10715.t1.exon2;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . CDS 672 1578 . - 0 ID=cds.g10715.t1;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . exon 441 513 . - . ID=g10715.t1.exon3;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . CDS 441 513 . - 2 ID=cds.g10715.t1;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . exon 31 182 . - . ID=g10715.t1.exon4;Parent=g10715.t1 NODE_3799_length_2727_cov_36.5671 . CDS 31 182 . - 1 ID=cds.g10715.t1;Parent=g10715.t1;3_prime_partial=true #PROT g10715.t1 g10715 MKSMMRGVVRGLEKLDIKYAERIESEISQDVTGDVFKLTKTAVGHGLPEAPTAIAYDAVQGLFAVGTERGSIRIYGQDNVEILIKLDVPNSVRRLFFITNCGYMVVADEKDRLILVDFREKETKVVRTFSAPESFTCTMLPPCSKWLYVGTCKGNVQVVNVETFVLCGTIVSWKDVMPANNMKFPGAVIAIEEQPTDETKMLIAHNFGNLCLWDIKARRAIRQYGNQTNGIPVNSVAWHPGGKQFALAQADGIVSVWNVRGTREPAMVKNPISQRGDREPITRVCWMSGTDPEHEVMAYSGGAMKSDKLDYLNVHIGNGNKITVINGPVLDMLITSRNPWPAGPHIPQCLVVLLPDEIAFFDVSTPSLPRFQPSYGLDLCSSSVSAVALLTRLPLGTGAAIALTGKEVTRSLGFSMK # ORIGINAL: g13852.t1 original gene structure, not modified by PASA NODE_1290_length_12377_cov_38.8241 AUGUSTUS gene 418 2685 . + . ID=g13852;Name=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS mRNA 418 2685 . + . ID=g13852.t1;Parent=g13852;Name=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 418 595 . + . ID=g13852.t1.exon1;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 418 595 . + 0 ID=cds.g13852.t1;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 762 903 . + . ID=g13852.t1.exon2;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 762 903 . + 2 ID=cds.g13852.t1;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 1127 1349 . + . ID=g13852.t1.exon3;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 1127 1349 . + 1 ID=cds.g13852.t1;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 1671 2063 . + . ID=g13852.t1.exon4;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 1671 2063 . + 0 ID=cds.g13852.t1;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 2335 2685 . + . ID=g13852.t1.exon5;Parent=g13852.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 2335 2685 . + 0 ID=cds.g13852.t1;Parent=g13852.t1 #PROT g13852.t1 g13852 MLVAVTICWVTEAVPYYVASLAIPLLTVLLGIIPGQDAETAAKTVFSKMFDPTLAMVLGGFAISAAFSKHQHEMRIASFLQRTTGDKPRLFLLCFVLLCALLSMFISNIAAAVLCTAVIAPVARDLPIGSRYARTLMLALAFACNIGGMLSPISSPQNSVVVGIVSDGYPGQSLSFGTWISASIPFCLVALVALWAYLLIVCRPNDIECVPAIHWDPRPVEREGVAVLIVSAVTVVLWSTLTETQGFFGDMGTIALIPILAFFGTGILHKGDFNTFQWHLVYLIAGGNVLGEAITASGLLDMIADQLEPMLEGKSAWLTLFLVSTFVLIVTTFVSHTVAAIVLMPIIARIGSDLNEFKFIVMGAAFMDSASMALPMSSFPNANALMVEDDYGRPFLRSWDYVRFGGPFSLVLLALMSSWGYAILSALF* # ORIGINAL: g13854.t1 original gene structure, not modified by PASA NODE_1290_length_12377_cov_38.8241 AUGUSTUS gene 8695 9816 . - . ID=g13854;Name=g13854.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS mRNA 8695 9816 . - . ID=g13854.t1;Parent=g13854;Name=g13854.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 8695 9816 . - . ID=g13854.t1.exon1;Parent=g13854.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 8695 9816 . - 0 ID=cds.g13854.t1;Parent=g13854.t1 #PROT g13854.t1 g13854 MTASMASISSVSFSSLPLEIAECDIAPLLTNKDCTSLSRVNSRLRFLLKHVRLYALRRVFSKKYAMSEDFRSVIWAHIPRRRLVLNLEECSTLTDVSTLGGVHTLNLFGCEGLEDVSALGSVHTLNLSCCYGVTDVSALGGVHSLNLSSCSGVTDVSALNGVHSIDLNSCYEVTDVSALGGVHSLNLTCCYGVTDVSALGGVHLLDLVCCYGVTNVSALGGVHLLDLAGCEGVTDVSALGGVHSLDLSGCYGVTDVSALGGVHTLDLCRCFGVTDVSALGGVHTLNLSHCDEVADVSALGGVHSLNLSGCKGVTDVSALGGVYALNLSNCEGVTDVSALGGVHSLNLSGCKGVTDVLALGGVHSQKFCPVAND* # PASA_UPDATE: g13853.t1, single gene model update, valid-1, status:[pasa:asmbl_1106,status:12], valid-1 NODE_1290_length_12377_cov_38.8241 . gene 3306 7124 . + . ID=g13853;Name=g13853.t1 NODE_1290_length_12377_cov_38.8241 . mRNA 3306 7124 . + . ID=g13853.t1;Parent=g13853;Name=g13853.t1 NODE_1290_length_12377_cov_38.8241 . five_prime_UTR 3306 3626 . + . ID=g13853.t1.utr5p1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 3306 3627 . + . ID=g13853.t1.exon1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 3627 3627 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 3825 4006 . + . ID=g13853.t1.exon2;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 3825 4006 . + 2 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 4402 4458 . + . ID=g13853.t1.exon3;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 4402 4458 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 4760 4885 . + . ID=g13853.t1.exon4;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 4760 4885 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 5292 5761 . + . ID=g13853.t1.exon5;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 5292 5761 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 6086 6230 . + . ID=g13853.t1.exon6;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 6086 6230 . + 1 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 6464 6610 . + . ID=g13853.t1.exon7;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 6464 6610 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . exon 6813 7124 . + . ID=g13853.t1.exon8;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . CDS 6813 6860 . + 0 ID=cds.g13853.t1;Parent=g13853.t1 NODE_1290_length_12377_cov_38.8241 . three_prime_UTR 6861 7124 . + . ID=g13853.t1.utr3p1;Parent=g13853.t1 #PROT g13853.t1 g13853 MSTSRPLRKRSMSAPVLLDLSKEEWAAALGAVGGAPSDNDFDQFFGVSLPPAVSAPNLHALADDALLPKTPTGFTKAMLRVHAQSGLRGPQSQSPPAVVVSSVEEELLSQVRRMSVLDTPSQYVGGSVFQFPEIKPFQGIAEEPLGESLTSILLGGVQSEQQQQQQHQQHQQQSQQSQQQQPQMTFPIFTQPPPQQQQQLQQLQQLQQQAIFQRMQQLQQQQQQQQQQQQVRGVSGMGVPTGGYGFQFAPTDQLAAPSFPTQMWSPSSGSANDQIDDDDLSDPTDVGGGGGGGGYADRRWQKRQHHLESEQRRRQNLKEAFDELMKQVPNCKPKTNKLLLLKRASEYIGFLRKTAEKLQVENMNLKQAYLIAMGHSVPNMKDDGSGGSQNV* # ORIGINAL: g13855.t1 original gene structure, not modified by PASA NODE_1290_length_12377_cov_38.8241 AUGUSTUS gene 10859 12097 . - . ID=g13855;Name=g13855.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS mRNA 10859 12097 . - . ID=g13855.t1;Parent=g13855;Name=g13855.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS exon 10859 12097 . - . ID=g13855.t1.exon1;Parent=g13855.t1 NODE_1290_length_12377_cov_38.8241 AUGUSTUS CDS 10859 12097 . - 0 ID=cds.g13855.t1;Parent=g13855.t1 #PROT g13855.t1 g13855 MASMASISSVSFSSLPLEIAECDIAPLLTNKDCTSLARVNSRLRFVLKHVRLYALRRVFSEKYAMSEDFRSVIWAHIPRQRLVLNLEECSTLTDVSALGGVHTLILFSCEGLEDVSALGGVHSLHLTCCSGVTDVSALGGVHSLDLTSCYGVTDVSALGGVHSLDLTCCYHVTDVSALGGVHSLDLTSCYGVTDVSALGGVHSLDLTSCYEVTDVSALGGVHSLNLSNCEGVADVSALGGVHSLDLSSCHAVTNVSALGGVHSLGLSGCKGVTDVSALGGVYALNLSNCEGVADVSALGGVHSLNLSNCEGVADVSALGGVHSLDLSSCHGVTNLSALGGVHSLDLSGCKGVTDVSALGGVYALNLSNCEGVTDVSALGGVHSLDLAGCKAVTDVLALGGVHSQKFCPVANG* # ORIGINAL: g2661.t1 original gene structure, not modified by PASA NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS gene 2125 4843 . + . ID=g2661;Name=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS mRNA 2125 4843 . + . ID=g2661.t1;Parent=g2661;Name=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 2125 2359 . + . ID=g2661.t1.exon1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 2125 2359 . + 0 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 2591 2808 . + . ID=g2661.t1.exon2;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 2591 2808 . + 2 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 3139 3253 . + . ID=g2661.t1.exon3;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 3139 3253 . + 0 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 3463 3511 . + . ID=g2661.t1.exon4;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 3463 3511 . + 2 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 3694 3879 . + . ID=g2661.t1.exon5;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 3694 3879 . + 1 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 4142 4275 . + . ID=g2661.t1.exon6;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 4142 4275 . + 1 ID=cds.g2661.t1;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS exon 4467 4843 . + . ID=g2661.t1.exon7;Parent=g2661.t1 NODE_2489_length_6075_cov_21.3427_potentialcontaminant AUGUSTUS CDS 4467 4843 . + 2 ID=cds.g2661.t1;Parent=g2661.t1 #PROT g2661.t1 g2661 MVSSSSNTGSVAGGVIGAVLGTAAIVVAILYFRNRASRMKMAALARSELELIDTVVRRPEIAQIEIPGSCIRLKSRIGEGEFGEVYLADVTLDRGGNVSLIKGAAKTFKVTSLSSADEIRSARSAFMAEIDLMRSIPPHVHVMGLLGVCTQSEPNCMVLEFAVHGDLRHFLLGGDQSNLTPSDLLCFCIDVARGMEHLTTCQVVHRDLAARNCMVVAGPRPPNVAENGWKLSPNAQVIVKIADMGLSKYTAGTDYYMGKTRRKLPVKWMALESLEKRLFTHATDVWSFGVVVWEIYSRGLKPYPGLDNHAIADYLTQNRRMDPPKECPESVRTLMAACWRKHPETRPSFSQAVLQLRRAMATLCGTSRAAANAFGSEADASKDGSIATKWQPELYALMEPACGIEEYGKTVTDGPLSTIGNAMYTELEEDDCRLSMH* # ORIGINAL: g8753.t1 original gene structure, not modified by PASA NODE_260_length_28859_cov_42.413 AUGUSTUS gene 14527 16800 . + . ID=g8753;Name=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS mRNA 14527 16800 . + . ID=g8753.t1;Parent=g8753;Name=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 14527 14741 . + . ID=g8753.t1.exon1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 14527 14741 . + 0 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 15002 15064 . + . ID=g8753.t1.exon2;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 15002 15064 . + 1 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 15316 15362 . + . ID=g8753.t1.exon3;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 15316 15362 . + 1 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 15532 15577 . + . ID=g8753.t1.exon4;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 15532 15577 . + 2 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 15992 16138 . + . ID=g8753.t1.exon5;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 15992 16138 . + 1 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 16435 16489 . + . ID=g8753.t1.exon6;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 16435 16489 . + 1 ID=cds.g8753.t1;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 16708 16800 . + . ID=g8753.t1.exon7;Parent=g8753.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 16708 16800 . + 0 ID=cds.g8753.t1;Parent=g8753.t1 #PROT g8753.t1 g8753 MVGRMHISAVAIVALFAVSCASMVRADGEQEFGYRPPEDIDSVRLRHLTDDTFEHATQAATGATTGDWLVAFCDNEEDSSDRVRLIMEKAQAVVYDKNFAYVDYRVNPDLVRRFKIVAHPTVLFFTHGKVYQLPYRATTKVEDIRAFLNGGYLQHKFYNVPDVNGVIPGDFQVRWFQSAVIATQQSTDGYLGVYVGIAVLALAIVLLLLKWSAGRGDGKRE* # ORIGINAL: g8756.t1 original gene structure, not modified by PASA NODE_260_length_28859_cov_42.413 AUGUSTUS gene 23305 24624 . - . ID=g8756;Name=g8756.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS mRNA 23305 24624 . - . ID=g8756.t1;Parent=g8756;Name=g8756.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 23305 24624 . - . ID=g8756.t1.exon1;Parent=g8756.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 23305 24624 . - 0 ID=cds.g8756.t1;Parent=g8756.t1 #PROT g8756.t1 g8756 MASFSFVPIEVFITYVVPFLPNADIVSLSRTNSSLRSHLRRFCTFTLRRRIAIKYYHDGGFRSSVLSLLPRERLELNLSYLEDVTDVSVLGGVHELNLSFCSRLVNVSSLNRVHILILTGCLQIVDVSSLAGVHSLILKACPYVEDASALGRVHTLDLSDCIGVVDVSALGGVHTLNLHGCVEVVDVSPLGGVHTLNLSGCTGVVDVSALGGVHSLDLSCCVELVDISALYRVHSLNLTRCFEVIADFSAFGGVHTLNLSHCFGVEDVSQLGTVHTLSLNGCDRVVEVSALGGVHTLSLCGCTKVANVSALGGVHTLNLFGCKSVTDVSALGGVHTLNLSGCTGVVDVSALGGVHTLNLNGCKSVTDVSALGSVHTLNLSGCTKVVDVSALGGVHTLNLNGCTGVANVSALGGVHTLDLRRCKGVVDVSALSGVHVLSV* # PASA_UPDATE: g8754.t1, single gene model update, valid-1, status:[pasa:asmbl_4650,status:3], valid-1 NODE_260_length_28859_cov_42.413 . gene 17238 18739 . - . ID=g8754;Name=g8754.t1 NODE_260_length_28859_cov_42.413 . mRNA 17238 18739 . - . ID=g8754.t1;Parent=g8754;Name=g8754.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 18564 18739 . - . ID=g8754.t1.utr5p1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . exon 18419 18739 . - . ID=g8754.t1.exon1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . CDS 18419 18563 . - 0 ID=cds.g8754.t1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . exon 18017 18120 . - . ID=g8754.t1.exon2;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . CDS 18017 18120 . - 2 ID=cds.g8754.t1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . exon 17715 17844 . - . ID=g8754.t1.exon3;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . CDS 17715 17844 . - 0 ID=cds.g8754.t1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . exon 17238 17444 . - . ID=g8754.t1.exon4;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . CDS 17356 17444 . - 2 ID=cds.g8754.t1;Parent=g8754.t1 NODE_260_length_28859_cov_42.413 . three_prime_UTR 17238 17355 . - . ID=g8754.t1.utr3p1;Parent=g8754.t1 #PROT g8754.t1 g8754 MASVERRLLKELAELRKTPATEFTLEPNEENILTWTAKLNPPAPSLYQGGTFEVKIVVPSDYPIRPPKMTFVTRICHPNIHFKSGEICLDILKTTWSPAWTLRSTCLALLVLLDNPEVDSPLNCDAGNLLRCGDDRGYRSLIKMFTKLYAIPKPT* # ORIGINAL: g8757.t1 original gene structure, not modified by PASA NODE_260_length_28859_cov_42.413 AUGUSTUS gene 24914 26075 . + . ID=g8757;Name=g8757.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS mRNA 24914 26075 . + . ID=g8757.t1;Parent=g8757;Name=g8757.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 24914 25009 . + . ID=g8757.t1.exon1;Parent=g8757.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 24914 25009 . + 0 ID=cds.g8757.t1;Parent=g8757.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 25644 26075 . + . ID=g8757.t1.exon2;Parent=g8757.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 25644 26075 . + 0 ID=cds.g8757.t1;Parent=g8757.t1 #PROT g8757.t1 g8757 MSLTWPEFERCCREISLRSDSLADGWTYTVLKPRTGFAVLEKSSVVRRTELANTANVHSDSTLFVSPQTPGGSTAASNNNNNSNDNSNGNSNGNSNGNSNDNSNENSNSNDNSNGNAQVDALLEELEDSDAEDIPAEKHDSVGLHSISLDGFIATALSPFLYCNISPFRYAQSQM* # ORIGINAL: g8758.t1 original gene structure, not modified by PASA NODE_260_length_28859_cov_42.413 AUGUSTUS gene 26137 27378 . + . ID=g8758;Name=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS mRNA 26137 27378 . + . ID=g8758.t1;Parent=g8758;Name=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 26137 26266 . + . ID=g8758.t1.exon1;Parent=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 26137 26266 . + 0 ID=cds.g8758.t1;Parent=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 26809 26906 . + . ID=g8758.t1.exon2;Parent=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 26809 26906 . + 2 ID=cds.g8758.t1;Parent=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 27169 27378 . + . ID=g8758.t1.exon3;Parent=g8758.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 27169 27378 . + 0 ID=cds.g8758.t1;Parent=g8758.t1 #PROT g8758.t1 g8758 MQPRQQSLRPNHDPREQHRRYDYSIVYSTSYGVPVLYFNGAALDGRRLSADAVWADVPAQYRAIIEKDKWTFITQSEHPVHGRPFYFLHPCETAALMRDITASSPTRNYVASWLNMVGPIVGLSLPKEYFVQIDDINIDGLNASR* # PASA_UPDATE: g8755.t1, single gene model update, valid-1, status:[pasa:asmbl_4653,status:3], valid-1 NODE_260_length_28859_cov_42.413 . gene 18993 22190 . + . ID=g8755;Name=g8755.t1 NODE_260_length_28859_cov_42.413 . mRNA 18993 22190 . + . ID=g8755.t1;Parent=g8755;Name=g8755.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 18993 19171 . + . ID=g8755.t1.utr5p1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 18993 19381 . + . ID=g8755.t1.exon1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 19172 19381 . + 0 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 19727 19812 . + . ID=g8755.t1.exon2;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 19727 19812 . + 0 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 20211 20322 . + . ID=g8755.t1.exon3;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 20211 20322 . + 1 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 20590 20688 . + . ID=g8755.t1.exon4;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 20590 20688 . + 0 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 21095 21205 . + . ID=g8755.t1.exon5;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 21095 21205 . + 0 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . exon 21577 22190 . + . ID=g8755.t1.exon6;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . CDS 21577 22119 . + 0 ID=cds.g8755.t1;Parent=g8755.t1 NODE_260_length_28859_cov_42.413 . three_prime_UTR 22120 22190 . + . ID=g8755.t1.utr3p1;Parent=g8755.t1 #PROT g8755.t1 g8755 MAFDASEAGVRQPTLTPFTHRFSIGEGLIIEQSMVVFPEHELDSGAILKNVDVGFKTWGSLNANGDNVIVVCHALTGHADVSNWWEAIIGPGRTLDSEKYFIFCANVLGSPYGTASPVTYNPDTGLPYGADFPQVTVRDTVRLHKRVLDHVLGVRRVHAVIGASLGGMQALEWGFFGADYTRHMLLIAACAKQSAWCMGWNECQRQAIFADPAWQGGRYSHGTQPAAGLSSARMIAMLTYRSQESLEEKFGVRPQDLSAVPDRYRAGRDDDPYLYTIQNYLRYQGRKLVSRFDANCYVRLTQTMDVHDAGAGRGGVAAALQSLSQPALVVGIESDLLYPVGEQRQVAASLGAGEYASIHARDGHDGLFVETQQLDAIISEYFVRHP* # PASA_UPDATE: g8752.t1, single gene model update, valid-1, status:[pasa:asmbl_4646,status:12],[pasa:asmbl_4647,status:12],[pasa:asmbl_4649,status:12], valid-1 NODE_260_length_28859_cov_42.413 . gene 5126 13737 . - . ID=g8752;Name=g8752.t1 NODE_260_length_28859_cov_42.413 . mRNA 5126 13737 . - . ID=g8752.t1;Parent=g8752;Name=g8752.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 13658 13737 . - . ID=g8752.t1.utr5p1;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 13475 13483 . - . ID=g8752.t1.utr5p2;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . exon 13658 13737 . - . ID=g8752.t1.exon1;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . exon 13378 13483 . - . ID=g8752.t1.exon2;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . CDS 13378 13474 . - 0 ID=cds.g8752.t1;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . exon 12895 12980 . - . ID=g8752.t1.exon3;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . CDS 12895 12980 . - 2 ID=cds.g8752.t1;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . exon 5126 12732 . - . ID=g8752.t1.exon4;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . CDS 5296 12732 . - 0 ID=cds.g8752.t1;Parent=g8752.t1 NODE_260_length_28859_cov_42.413 . three_prime_UTR 5126 5295 . - . ID=g8752.t1.utr3p1;Parent=g8752.t1 #PROT g8752.t1 g8752 MATAERIGQLGAERTGLQKKTFTKWINSHLAKVDDHIDDINKDLRDGIKLLKLLQLISGETLPNPERGQMRFHKIGNVGAALKYLQTKIHFTNIGTEDIVDGNEKLTLGLVWTMILRFQIQDISVEDLSAKEALLLWCQRKTAGYPGVNVQDFSRSFKDGLAFNALIHKHRPDLINFDGLKKGDDGNNLNNAFNVAEKDLGIMKLLDAEDIVDTEKPDERSIMTYIAAYYHYFANMKEHDVGSKRIANAVGFAAEIEKMRKDYEDLASDLMAWIKASTEKLENREFPNSLAGIKQSLGDFQKFRTGEKPPKYADKGNLESQFFNLQTRLRSRNRPMYHPPAGRLISDVNRAWKRLDAAEFERELALREELERQERLEQLAARFGRKATLRASWLTDAEKIVAQPTVAHDIASIEAATKKHEAIASDVASHEDHIMAVLAVAEELVSEKYHGADAIKTRADEISTRWDNLLKALAARRDSLLRMYAAQRYFADCDDMVAWVRSTEDVIRTSDWGLDVASVEELIEQHRIVEVEVATRGEQIAALTPRGEELKKGDHGTDAQSIDGKRAKVEADYAELKTALAARIAKLLEALKYREFARDCESEEAWIRDNETQALSSDFGKDLIAAQRLIKRHELFEAELNAHEKSIVDTAAVGRALATAGHYESADIAARRDALLKRWEELRSRSRARGAHLIEVSTAQRFTSDADDAESWLRERLAAASSDDYGRDSASAVGLLKRNDALQTEVQAYAANLKQLGDRAKEIEPFAGHTVVERHAELNALYDQIKEAAKKRGVALEASVQLHGYNTKATDIEAWLDDRQAVASSAEATQADLATIEAVRDKMAEIGRDLTANEGRVRDIGKIAENLVAANHPNTPEIQERQLIIDGKWNALQTLVAQNDANLGSYDEAGRFLREVADVQRRIDEKNTILSSKDEGSDLASAEALKRKVNATGSEIHAIAAKIADMERDGGRICDAHPDHSDDLARALALVSVALGGVLKKLDERKKTLEDSVEVHRFLSDLRHASIWIADRNTIVSSEEVAQTLTGAEQLVRRHDKHKADIDGRVDTFDKLVAKGELLSTRLRGKPIGEEVQTKITIFKGDRKLLGDAWLNRHRRLNGSLEFFKFGRDAEVVEDFLTDVEGSLSSEAIGDSIESVELLIKTHEAVAGTIAANEGNVKKIDQYATTLITANNAESPAIDARRNAIIARWRGLDDLLAKRHALLEASRKLQLFQRDAEDIQGWMDDRYKIAAEDPREDKEPITDRILRHDAFVGELEATTPRIASLIEGGQILVDGNHYASPDIKARLAAVTAQWDALKAKADEKGRKLAEVDSEEGFGRHADALMLKLGEVEALLASDDVGRDLYAVQGLLKRHDDIEARVVALAQPIESLIRKAKEYAEEHNLDESSITVKKMALEERYGKIRSRAANRRARLNIALKHREWAKEVEDEEAWIKEREPQAYSQEVGKDLIGALKMIKRQEAFATELSGHQKGIIALLEHGRSMAKEAHPAADEIEAAATNLENKWCALADASRARSNKLNHSLDYERFAADAHEEDVWAVDRTALLTTDIHPDPATAAVLVKKHQEAVGENTARKERVQNVRANGEKLIAEGNPFVESINKLSNQLVERVTALDDATAKRTKFLDDLLRLHNFSRAIDAVEAWIASKTTSAQSTEYGHNLAEVDGHERAHDKLGAAVDAFKPRIDTLGELKATLLRAGCSDPAAAEARYGAAIAKWNALGAAAADRKKKLADNRTRLQRIEDLLLEFAKRSSAFNNWVESTEEDLTESVRVNSIEEITALMGSHATFRQSALVAPAKDWEHLVRLDEQIRAMNVTLNPYTPYTTAILGEKWKNVQRLVVDREELLKRESERQVLNESLRKTFAEQADGFSLWVAKTRVSLVEATGELEAQLHAVQATQAEIAGKRAAVTALEDIGRKLQEHVILDNRHTKHSTVSLAQEWDVLEQLAKRMAYNLEQQIRASKTVGVSAEQLREFNESFNHFDRDHSGKLDYKEFRTCLKSLGYDFGAGEQGEAEFEAIVLTVDPHKEGLVTREQYVAFLISKETVNAEGPEDVLEAFRGLAGDKPYVTKTQIYTSLSAEQADFCIRHMKPYVDAANPVENAYDFRSFTSSLFSDDDNKARRAESEAWSKSAADREAQEDAAKEKTRAAAQAEKVERETQRKQQLERAALEKKQRSVEDAAAAQRAAEQRAADEKRIVEEREAAAIAAEKAAAELRAESERVAAERAEAERRAAEERVAEAKRAAEAEKAAHEAAIAAAAADAERVAREEAEHREAELQRQKAEAEAEAKRQEAEREAAEAAAAAASAAAAAEQKAKEEEEAAAAAAAAEAKRKEDEAAASAAAAAAAAALIAADEKRKEEEAAAAAAEAKRKEDEAAASAAAAAAAAAALIAADEKRKEEEAAAVAAAEVKRKEEEAAAAAASAAEAKHKEEEAAAAAAASAAAEAAKPHVDFSAKATDIPSAASTPAKNSAPSSPSTDKKKKDKKEKKEKDDKDEKKEKKGIMGGLFRRKSNSSPSS* # PASA_UPDATE: g8759.t1, single gene model update, valid-1, status:[pasa:asmbl_4651,status:12], valid-1 NODE_260_length_28859_cov_42.413 . gene 27429 28809 . - . ID=g8759;Name=g8759.t1 NODE_260_length_28859_cov_42.413 . mRNA 27429 28809 . - . ID=g8759.t1;Parent=g8759;Name=g8759.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 28759 28809 . - . ID=g8759.t1.utr5p1;Parent=g8759.t1 NODE_260_length_28859_cov_42.413 . five_prime_UTR 28331 28435 . - . ID=g8759.t1.utr5p2;Parent=g8759.t1 NODE_260_length_28859_cov_42.413 . exon 28759 28809 . - . ID=g8759.t1.exon1;Parent=g8759.t1 NODE_260_length_28859_cov_42.413 . exon 27429 28435 . - . ID=g8759.t1.exon2;Parent=g8759.t1 NODE_260_length_28859_cov_42.413 . CDS 27650 28330 . - 0 ID=cds.g8759.t1;Parent=g8759.t1 NODE_260_length_28859_cov_42.413 . three_prime_UTR 27429 27649 . - . ID=g8759.t1.utr3p1;Parent=g8759.t1 #PROT g8759.t1 g8759 MMSCWAYNPLERPSFAELTKALSDSDSLLQSTTKEEGAEGDDTAKTGTIVISYESARTLSASGPAATETAAATPTPKLRRGLSGAYLDITMTGAGAGGAEIAVAGDTGDTSDSARRFSVLSSSDYDNSARNETPASSSVYDNPDRYAPTVPDVKAGADLPPGVEILARAQPRLPAQNEYTIISAPWQRGASNEGVLVVQQRQPGNQTRGGGDMASHSYCSVEESTV* # ORIGINAL: g8751.t1 original gene structure, not modified by PASA NODE_260_length_28859_cov_42.413 AUGUSTUS gene 192 4293 . + . ID=g8751;Name=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS mRNA 192 4293 . + . ID=g8751.t1;Parent=g8751;Name=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 192 979 . + . ID=g8751.t1.exon1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 192 979 . + 0 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 1957 2097 . + . ID=g8751.t1.exon2;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 1957 2097 . + 1 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 2420 2491 . + . ID=g8751.t1.exon3;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 2420 2491 . + 1 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 2943 3011 . + . ID=g8751.t1.exon4;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 2943 3011 . + 1 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 3421 3502 . + . ID=g8751.t1.exon5;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 3421 3502 . + 1 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 3689 3781 . + . ID=g8751.t1.exon6;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 3689 3781 . + 0 ID=cds.g8751.t1;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS exon 4132 4293 . + . ID=g8751.t1.exon7;Parent=g8751.t1 NODE_260_length_28859_cov_42.413 AUGUSTUS CDS 4132 4293 . + 0 ID=cds.g8751.t1;Parent=g8751.t1 #PROT g8751.t1 g8751 TFLYGAVGQCGNQIGCRFWDLALREHSRYNKNGIYDESLSSFFRNVNDAYDDPRGIAVGERIKSLKARSVLIDMEEGVVNEIIKGPLGDVFDARQLITDVSGSGNNWAVGHQTYGEAYREKISEAIRRPAECCDCLQSFFTIHSMGGGTGSGLGTYVLEMLHDEYPEVYRFTTAVFPSEDDDVVTSPYNSVLALGRLTEFADCVLPVENESLIDICEKISLAHTNASRGTRQKTGISESGGKDKKPFDEMNNIVANLLLNMTSSARFEGSLNIDLNEITMNLVPFPRLHYLMGSMAPLYSLADVNIPARRLDQMFSDVFSRDHQLIRADPKSGLYLACALMVRGNVEVSDVRRNIERMRPSLRFVSWNEEGWKTGICSVPPANQTHSLLALANNCCIATTFRGLQERFVKLYRRKAHLHHYSSVDGMEMGLFDSSLESLNGLIGDYEALGQGATKGSHAAPINRVRVV* # PASA_UPDATE: g5259.t1, single gene model update, valid-1, status:[pasa:asmbl_4111,status:3], valid-1 NODE_2351_length_6612_cov_41.4845 . gene 3386 6556 . + . ID=g5259;Name=g5259.t1 NODE_2351_length_6612_cov_41.4845 . mRNA 3386 6556 . + . ID=g5259.t1;Parent=g5259;Name=g5259.t1 NODE_2351_length_6612_cov_41.4845 . five_prime_UTR 3386 3659 . + . ID=g5259.t1.utr5p1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . exon 3386 3856 . + . ID=g5259.t1.exon1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . CDS 3660 3856 . + 0 ID=cds.g5259.t1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . exon 4007 4217 . + . ID=g5259.t1.exon2;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . CDS 4007 4217 . + 1 ID=cds.g5259.t1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . exon 4309 5054 . + . ID=g5259.t1.exon3;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . CDS 4309 5054 . + 0 ID=cds.g5259.t1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . exon 5159 5286 . + . ID=g5259.t1.exon4;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . CDS 5159 5286 . + 1 ID=cds.g5259.t1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . exon 5476 6556 . + . ID=g5259.t1.exon5;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . CDS 5476 6059 . + 2 ID=cds.g5259.t1;Parent=g5259.t1 NODE_2351_length_6612_cov_41.4845 . three_prime_UTR 6060 6556 . + . ID=g5259.t1.utr3p1;Parent=g5259.t1 #PROT g5259.t1 g5259 MFGLMGQGIQAQQQRTPQQMLHDSMSTSLWFGDLDPFWDENVIGSIFNGMGEPVLSVKLIKNKLTGAPAGYCFVEFGDAERAQRILETFNGTPIPGTLPARKFKLNWASHSTSKNEPEYSIFVGDLTPEVNDYQLQMFFKSRYPSCKAAKVVLDQNNVPKGFGFVRFSDFGEYNRALVEMQNAVGCGSKPLRISTATPKKNTQPGAPAPTGMWGGNTSPGAPAGYSNGGFYPGQPQQQQQQQQQQQQQQQQQQGGYDFPQQMSHMSHQQQPIGAPLQSPSPYGNVNVNVNHNVGMSAGMPQSPANFYGQMHAGSAHMSGNASPAGMVAAHHGHVQQPMAQPHPGYTIGAVQPNGDILGPVGGDVQTSTVFVGGLAPQVTTDDLASFFSPYGEIAEVRIPAGKGCGFVEFIHRSQAEVAISQLNGIYIGGQPVRLSWGHHRNPQQGQPGQPPMPVVDLVGSHSVMHGGGHQGMHHVQQHHGVAVGVQGSHMAMAPMMQQQQQMPLQHQQHPQQGQQQGQQHVQQLSPGHQQQMPPQHPQLQHALHQQHPGHLGPQQQHPGHLGPQQHPQQPQHPQQAMSVDRGGFVERDNDALAVHKEDLFQELEESRWRFATGLAEQLVAE* # PASA_UPDATE: g5257.t1, single gene model update, valid-1, status:[pasa:asmbl_4112,status:12], valid-1 NODE_2351_length_6612_cov_41.4845 . gene 439 799 . + . ID=g5257;Name=g5257.t1 NODE_2351_length_6612_cov_41.4845 . mRNA 439 799 . + . ID=g5257.t1;Parent=g5257;Name=g5257.t1 NODE_2351_length_6612_cov_41.4845 . five_prime_UTR 439 439 . + . ID=g5257.t1.utr5p1;Parent=g5257.t1 NODE_2351_length_6612_cov_41.4845 . exon 439 799 . + . ID=g5257.t1.exon1;Parent=g5257.t1 NODE_2351_length_6612_cov_41.4845 . CDS 440 610 . + 0 ID=cds.g5257.t1;Parent=g5257.t1;5_prime_partial=true NODE_2351_length_6612_cov_41.4845 . three_prime_UTR 611 799 . + . ID=g5257.t1.utr3p1;Parent=g5257.t1 #PROT g5257.t1 g5257 EYAKRRAHDAFKEYKAESDPAKIAQLYEEGQKQLAVIKRQTIINNMYGSDKMVVEQ* # PASA_UPDATE: g5258.t1, single gene model update, valid-1, status:[pasa:asmbl_4110,status:3], valid-1 NODE_2351_length_6612_cov_41.4845 . gene 905 2069 . + . ID=g5258;Name=g5258.t1 NODE_2351_length_6612_cov_41.4845 . mRNA 905 2069 . + . ID=g5258.t1;Parent=g5258;Name=g5258.t1 NODE_2351_length_6612_cov_41.4845 . five_prime_UTR 905 957 . + . ID=g5258.t1.utr5p1;Parent=g5258.t1 NODE_2351_length_6612_cov_41.4845 . exon 905 1100 . + . ID=g5258.t1.exon1;Parent=g5258.t1 NODE_2351_length_6612_cov_41.4845 . CDS 958 1100 . + 0 ID=cds.g5258.t1;Parent=g5258.t1 NODE_2351_length_6612_cov_41.4845 . exon 1369 2069 . + . ID=g5258.t1.exon2;Parent=g5258.t1 NODE_2351_length_6612_cov_41.4845 . CDS 1369 2011 . + 1 ID=cds.g5258.t1;Parent=g5258.t1 NODE_2351_length_6612_cov_41.4845 . three_prime_UTR 2012 2069 . + . ID=g5258.t1.utr3p1;Parent=g5258.t1 #PROT g5258.t1 g5258 MSILQRVHVELGAQHYAEPYNGNTFLKMPANAIVNAAYVVVGAHWLNRSRHDAKFRAADFFMGDRGRKYFCTFPSLAIAYAPIQFGRIVLQDRAFAVLDQWVTLPIFAVASYWAHHVANEIELKKKAAAKARDIDVARASTPLGLGLGSAVALSVASFAPAFFHPRGFEVALCAHIASAAWGGVRLLQLSRWDCALVKDVGLALASCAGFVALKLLDHHIPLVCGTLSGHFWSKICDALQVHYMCRLMFRVHSSHWELFGV* # ORIGINAL: g1304.t1 original gene structure, not modified by PASA NODE_3944_length_2478_cov_34.8048 AUGUSTUS gene 336 2384 . + . ID=g1304;Name=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS mRNA 336 2384 . + . ID=g1304.t1;Parent=g1304;Name=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 336 449 . + . ID=g1304.t1.exon1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 336 449 . + 2 ID=cds.g1304.t1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 669 780 . + . ID=g1304.t1.exon2;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 669 780 . + 2 ID=cds.g1304.t1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 1109 1241 . + . ID=g1304.t1.exon3;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 1109 1241 . + 1 ID=cds.g1304.t1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 1685 1730 . + . ID=g1304.t1.exon4;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 1685 1730 . + 0 ID=cds.g1304.t1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 2011 2087 . + . ID=g1304.t1.exon5;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 2011 2087 . + 2 ID=cds.g1304.t1;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS exon 2187 2384 . + . ID=g1304.t1.exon6;Parent=g1304.t1 NODE_3944_length_2478_cov_34.8048 AUGUSTUS CDS 2187 2384 . + 0 ID=cds.g1304.t1;Parent=g1304.t1 #PROT g1304.t1 g1304 KNAARCGFRGGTSLGLPFDPSGEACRGCPHPMDGGHIAMTYTALACLGILGDDYSRVDRASVVMGLRQLQLPDGSFCTTAEGSENDMRFVYCACVISSMLGDWSGVNVDAVVDYIKRSFGYDGGFGQGPHLEAHGGSTYCAVASLQLLGKLDTALTADERRRRSGCLYSEPVSLNTSFIPIAPLLHAAGRRTGLCAGVSCGRSVGSMDAQTSCKTHAIPSGLARL* # PASA_UPDATE: g724.t1, single gene model update, valid-1, status:[pasa:asmbl_10167,status:3], valid-1 NODE_969_length_15290_cov_42.4263 . gene 2977 6972 . - . ID=g724;Name=g724.t1 NODE_969_length_15290_cov_42.4263 . mRNA 2977 6972 . - . ID=g724.t1;Parent=g724;Name=g724.t1 NODE_969_length_15290_cov_42.4263 . five_prime_UTR 6741 6972 . - . ID=g724.t1.utr5p1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 6549 6972 . - . ID=g724.t1.exon1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 6549 6740 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 5806 6363 . - . ID=g724.t1.exon2;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 5806 6363 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 4993 5550 . - . ID=g724.t1.exon3;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 4993 5550 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 3470 4615 . - . ID=g724.t1.exon4;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 3470 4615 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 3257 3316 . - . ID=g724.t1.exon5;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 3257 3316 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . exon 2977 3075 . - . ID=g724.t1.exon6;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . CDS 3013 3075 . - 0 ID=cds.g724.t1;Parent=g724.t1 NODE_969_length_15290_cov_42.4263 . three_prime_UTR 2977 3012 . - . ID=g724.t1.utr3p1;Parent=g724.t1 #PROT g724.t1 g724 MSGLPPEMELLKQRYHQELNELATRISSLERQLASKNIQLDRAETDLRETRMQLREVREQYEGKPENAVAKKEREMRREAERGELNKTNILKEIEELRMVDMKRKKESEDVKAELSRCQTHLDNVKSRVVLLEKENAMIRQQNEDFQNARELHAATPSASAQVADQSVASIAEGDEEVSVAGGNELDVRPNDMTSSSNVNISSFAGPSYTGTSAEAQETIRVLQAQIIGMANDATRRHNELQNQLQGFEKFVEELKYQYEEFLDVMKLEHESLKAKHASEYELLKKEFDRFKGLQIDERRRLMREHQGLLYSMQAQFDEYRATAEFLFNTEAAKFEDKIGTMQQKYEQEIRYIVQAKDRFYEELLVAKDAKIMNLIEGSDLQSIMHKHELELERARKEHVKNIERVRSQLDSDQKRAMDQLQRELQGLEAKFEKAQSYGRSMEQKVKENLAVIEIKNQKIAEREAAHSRDKSEWERILAAANARIDALCQEREHLKHRIIRLQLDAKGEGDQSVGGMVKRLAHDTAGLASRYTEIIKAGEKATSEHAEIARKYREQGRLLESVRRELATRTTEFTRLTETFERFITSRAKELQEGTTRSRPWATRTREPGESGAGGKMAATAALSSPEKRRADGAGRVSPGRTGGMGTARSESPGSTLNKKDTLPSLAAVSESTISEDDSLAGRRRRRTRSDGTDVPPDRKVRPASRTVSTEVAQEIERGLTYLKRFKTLSSAYATGRFHYPTGALGTYSQAELTAAADHPMLRRTGIYERLTHAESEHARYRHENPDKEKLTSVEGPRPRVYMGKASKQADSDEDEDGLSLKLYDYDGSVRREEEVRPIAGQRLPVGPPKAASAYLK* # PASA_UPDATE: g723.t1, single gene model update, valid-1, status:[pasa:asmbl_10166,status:3], valid-1 NODE_969_length_15290_cov_42.4263 . gene 1878 2809 . + . ID=g723;Name=g723.t1 NODE_969_length_15290_cov_42.4263 . mRNA 1878 2809 . + . ID=g723.t1;Parent=g723;Name=g723.t1 NODE_969_length_15290_cov_42.4263 . five_prime_UTR 1878 2030 . + . ID=g723.t1.utr5p1;Parent=g723.t1 NODE_969_length_15290_cov_42.4263 . exon 1878 2419 . + . ID=g723.t1.exon1;Parent=g723.t1 NODE_969_length_15290_cov_42.4263 . CDS 2031 2419 . + 0 ID=cds.g723.t1;Parent=g723.t1 NODE_969_length_15290_cov_42.4263 . exon 2641 2809 . + . ID=g723.t1.exon2;Parent=g723.t1 NODE_969_length_15290_cov_42.4263 . CDS 2641 2746 . + 1 ID=cds.g723.t1;Parent=g723.t1 NODE_969_length_15290_cov_42.4263 . three_prime_UTR 2747 2809 . + . ID=g723.t1.utr3p1;Parent=g723.t1 #PROT g723.t1 g723 MAEHGKGVAIPAHDGSALRIGIVRARWNPEVINALHDGCIQALKSCGVRDENIIVESVPGSYELPYGAAALAASGRVDAVVTLGCLIKGETMHFEYICEAVTQGIMRINLDTKVPVMFGVLCCMTMDQARARAGLTESGHNHGTDWGLGAVEMALIRQRYHGNH* # PASA_UPDATE: g722.t1, single gene model update, valid-1, status:[pasa:asmbl_10165,status:12], valid-1 NODE_969_length_15290_cov_42.4263 . gene 225 1631 . + . ID=g722;Name=g722.t1 NODE_969_length_15290_cov_42.4263 . mRNA 225 1631 . + . ID=g722.t1;Parent=g722;Name=g722.t1 NODE_969_length_15290_cov_42.4263 . exon 225 353 . + . ID=g722.t1.exon1;Parent=g722.t1 NODE_969_length_15290_cov_42.4263 . CDS 225 353 . + 0 ID=cds.g722.t1;Parent=g722.t1;5_prime_partial=true NODE_969_length_15290_cov_42.4263 . exon 571 785 . + . ID=g722.t1.exon2;Parent=g722.t1 NODE_969_length_15290_cov_42.4263 . CDS 571 785 . + 0 ID=cds.g722.t1;Parent=g722.t1 NODE_969_length_15290_cov_42.4263 . exon 1021 1631 . + . ID=g722.t1.exon3;Parent=g722.t1 NODE_969_length_15290_cov_42.4263 . CDS 1021 1393 . + 1 ID=cds.g722.t1;Parent=g722.t1 NODE_969_length_15290_cov_42.4263 . three_prime_UTR 1394 1631 . + . ID=g722.t1.utr3p1;Parent=g722.t1 #PROT g722.t1 g722 VMDKAEACLLAIYNTEAINADGTSIPAKMYTPQSLLRPSVYHEATGPSLTLTETALAQHESAQQPVVVRRQLHSLTRIAPTERATVISFVLSRLNACLNTLPDASLEAMCRVYERIVSAGCPFGIERPVPSVPSDFPNGDFPQLSQHPRISLDSRTLQEMLVGIYQCVHAASRSVSAAAILALERLHDRASHELIIEVTLVTEAIRHSIALDAGREAAANRQGPQPLFEDVSLDSIDF* # ORIGINAL: g725.t1 original gene structure, not modified by PASA NODE_969_length_15290_cov_42.4263 AUGUSTUS gene 7642 11499 . + . ID=g725;Name=g725.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS mRNA 7642 11499 . + . ID=g725.t1;Parent=g725;Name=g725.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS exon 7642 11499 . + . ID=g725.t1.exon1;Parent=g725.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS CDS 7642 11499 . + 0 ID=cds.g725.t1;Parent=g725.t1 #PROT g725.t1 g725 MGRRKAPREAAAGPESDAEPGSHIAAIRAAARAARALSVEVYVNRAQCARLVRRLDALVEVACVARCTTADGEAPLVRALEAARECEVTMRQLAGPRWFLRAVRAGCDCGTFAHMCRLLVNAAKSLLHGQPLPRELAVSDDMDAENASDIRSDATFLKKAAGQIVTQVRQQNENASRGTPIPSIEDYELLVQSSYERSLLRAVDRSLGIADDESHSADIDICLWELAFKGQFSTRAYKNVARASSYAAEWSGRPVLVVSVAPETDGTGLSARRMQQLRTDFALLGSISHVSIERTHGLCLEGAMRQDGQRRLWFGAVLDPPPSGGTLRDSVYTRDPPVVHGALRTESVFVDQAGHALVGGLAVSTLSKALQRDRPPERSLGLSSGNLLDEYVVSSHHLPFDPWVAPEVLAGASMSAPCDVYAFSMLLWELAHSPRIPWGDELGASMTPQDARMQVMRASRPNISPDCPPGIVALIRACWSQYPADRPRFTAVLACMSHGSWERPLSANAPIYVKPVPPRMPPPSQVPSGRRTPRKTSSTVAVEPAGSRFLDMVASGPTRRADSAQDENADDETKERQNGAKRGRGATQNNSQVLSGRPAPDDAGRGLEGPGAESADAKSRLRSRTKSVEPLDGDGPLDGAGIGVLTAAPPPPPGKKVRREPRYRTRSYDKDDGQNRRSSSAASMQDSDGEDEKEALRNRRMLKPIDRDEAVDTRTDASTQAAQTSDIASDDSDSDVVVDGCGVSESVPVTRQEYARASHNDDGVSGATGDEVDATYYEIPEDNESSSDESVGFAVAATHAADMVGSMLSNTVGAVLGNMADDFVSEVCAQGKGFTTDADMLEHFADTVRNDSTTYYTPLLNVVLASKTDGSEASARASANALSVLNWADAALHDISLRGIRAPGANLSAARLDGTDLRDADLRGSQMEDASLVGTLLDDCNLEGARITFRKEMCGHTRTVQSVSYSPRAARLASGSDDHSIKIWDLETGECLRTLTGHDDAVCSVAYSPDGGFIVSASEDCTARMWNSESGKCVRTFRHDGWVLCAAFSPTGEALATGAKDSSLRLWDANTGECDRTVTNGHSDAVYTVTFSPDGKQLASGGYDRLVRLWSVKDLSPLRTLKGHAGWVLSVAFSPNGKTLASGSLDQTICLWDVQSSNCKETLNGGGGWVLSVSFSPDGQHIAAGSEDKALRVYDTKDHGRVVRTIRGHREAVRSVAFAPDGTSIASGSDDSSVRLWNATTGQCVKAIEGPKKALSRRGSHARGLAANAHKSMDSLSTVASKPPA* # ORIGINAL: g726.t1 original gene structure, not modified by PASA NODE_969_length_15290_cov_42.4263 AUGUSTUS gene 12292 14848 . - . ID=g726;Name=g726.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS mRNA 12292 14848 . - . ID=g726.t1;Parent=g726;Name=g726.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS exon 14234 14848 . - . ID=g726.t1.exon1;Parent=g726.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS CDS 14234 14848 . - 0 ID=cds.g726.t1;Parent=g726.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS exon 12292 14154 . - . ID=g726.t1.exon2;Parent=g726.t1 NODE_969_length_15290_cov_42.4263 AUGUSTUS CDS 12292 14154 . - 0 ID=cds.g726.t1;Parent=g726.t1 #PROT g726.t1 g726 MQSNNHPNGIHNDTRTEGPFVAYSVIIQVDADSYERTLPEKLSDAGVGIPLGRGATERCRAVKQWLESDVNRKWLVIIRGADDAAYDSCPWMGRCLPERGGDVIVTSRRSLGGASGAFGEIRLGPLKPHDGRRMFDAVAIGGNEDESAALDQIVSVLGGIPRPLACAANFIVENRVPLSLYLAQLLEPCHRQIALAPFSLAVQSAWFYLVVPEECADAVDAAIAVLLQYGLLESREALPALGPSFECNSLVQEAVRLTLCAVDLADVCQHAFKLVDAEFDFDPCAESTWPRAREMWHHVAAVCELRLVTGSAIPANDSHGRVKKYVRDTQVGRTLHVLGNALLFLGISHVRAAVVYEKSLVLLGGHAAVKRDEVAEVVEHLGDALATAGSRLEAAECYQRALELRAALTAVSETTPNTPTYLRMGSLFEALGYYTTAVDNYKSGMIDAGADSKLHGAVLNSMGRILGSLGLDSAAKAHMRAAMRSLADAGEEHGVYRTMVRRNLAALQFKLWEFPDAIEGLRSTMNDLERVFGVAHGDYAASVYLDGRVLLALGQYDDAMRQFRRCIDILLVDVGAGHLDLAAPTVAVADIYMRLGKEPLAAECLANAIVIFDSNEVVDDHEDRLVVDLLLRVALHPDQCDGILLPECVTRRGVPPHALPEAHVAAIEERLSREGVVYDCLCPELRPSEACVCQRTSNGSWHPTTADALVVSSMWYSQRGKFADAARCLERARDIRRVAFGDRHPETAEALCMLGDALCLDRSTSEGLVQLGEGIAMMKVAYGEGCGVTLAQPHPLIGVYLEHYLCHSMQRPTLLAMPSRHGHDQ* # PASA_UPDATE: g4041.t1, single gene model update, valid-1, status:[pasa:asmbl_2188,status:12], valid-1 NODE_1627_length_10135_cov_39.1653 . gene 409 2520 . - . ID=g4041;Name=g4041.t1 NODE_1627_length_10135_cov_39.1653 . mRNA 409 2520 . - . ID=g4041.t1;Parent=g4041;Name=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 2429 2520 . - . ID=g4041.t1.exon1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 2429 2520 . - 0 ID=cds.g4041.t1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 1956 2192 . - . ID=g4041.t1.exon2;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 1956 2192 . - 1 ID=cds.g4041.t1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 1626 1794 . - . ID=g4041.t1.exon3;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 1626 1794 . - 1 ID=cds.g4041.t1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 1250 1452 . - . ID=g4041.t1.exon4;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 1250 1452 . - 0 ID=cds.g4041.t1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 748 880 . - . ID=g4041.t1.exon5;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 748 880 . - 1 ID=cds.g4041.t1;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . exon 409 545 . - . ID=g4041.t1.exon6;Parent=g4041.t1 NODE_1627_length_10135_cov_39.1653 . CDS 409 545 . - 0 ID=cds.g4041.t1;Parent=g4041.t1;3_prime_partial=true #PROT g4041.t1 g4041 MSNNVAKAPREKAAAPKSAKETNIQVVLRCRGRNDAEKKAGSAAVIECNGATREVIVKQPSPVNTDKVTTKTFTFDRVFGPDTAQQDLYADVVEPMLDEVIQGYNCTIFAYGQTGTGKTYTMEGRRNVEEPGTIAHDDPEAGIIPRTLHHLFDMLEKQSESEYAVKVSFVELYNEELRDLLGADEPNGANMGVNATVMSGNQSSVNARLRIFEDAARKGTVIIQGLEEVVVHNREEVYAIMARGSGKRATAATQMNQQSSRSHCVFTITVHLKETTVEGEELVKVGKFNLVDLAGSENVGRSGAINQRAREAGNINQSLLTLG # PASA_UPDATE: g4043.t1, single gene model update, valid-1, status:[pasa:asmbl_2191,status:12], valid-1 NODE_1627_length_10135_cov_39.1653 . gene 5370 8041 . + . ID=g4043;Name=g4043.t1 NODE_1627_length_10135_cov_39.1653 . mRNA 5370 8041 . + . ID=g4043.t1;Parent=g4043;Name=g4043.t1 NODE_1627_length_10135_cov_39.1653 . exon 5370 5393 . + . ID=g4043.t1.exon1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . CDS 5370 5393 . + 0 ID=cds.g4043.t1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . exon 5585 5877 . + . ID=g4043.t1.exon2;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . CDS 5585 5877 . + 0 ID=cds.g4043.t1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . exon 6367 6473 . + . ID=g4043.t1.exon3;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . CDS 6367 6473 . + 1 ID=cds.g4043.t1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . exon 6837 7016 . + . ID=g4043.t1.exon4;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . CDS 6837 7016 . + 2 ID=cds.g4043.t1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . exon 7369 8041 . + . ID=g4043.t1.exon5;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . CDS 7369 7865 . + 2 ID=cds.g4043.t1;Parent=g4043.t1 NODE_1627_length_10135_cov_39.1653 . three_prime_UTR 7866 8041 . + . ID=g4043.t1.utr3p1;Parent=g4043.t1 #PROT g4043.t1 g4043 MPCGGLPCTSDPYEGLCFEARVHDCRGQPDKALDSLARAESCQPRRPEAHLLRAVYCEKGGDRNAAISAYLRASTVAPMCADVYCLRAIMWYRAADFVKSVADCDRAIGIDEGAVMAHIVRGDAQKALSQMGKSTGNEYIEDYSRAMACDARARPYIGRGFSVDRWADFEAFLCEFSQVCRVGAGSLGGPLEGIRLQCDIDDELAAQKAREEAERESERQMHLDNRNGKTNTRDYRMGWHEQGTVKRDAQFKLPKYELPRTKDPARQYSRPWAAPAEGGDGSSQVAHSAHNNSSNGNINNASSKSNDIDPIHTASGSKPAGSAHGGTTAHPHTAAHIHTAAAPPQHGKTGVSRQSKDGPPNAPKRR* # PASA_UPDATE: g4044.t1, single gene model update, valid-1, status:[pasa:asmbl_2189,status:12], valid-1 NODE_1627_length_10135_cov_39.1653 . gene 8065 9974 . - . ID=g4044;Name=g4044.t1 NODE_1627_length_10135_cov_39.1653 . mRNA 8065 9974 . - . ID=g4044.t1;Parent=g4044;Name=g4044.t1 NODE_1627_length_10135_cov_39.1653 . exon 8065 9974 . - . ID=g4044.t1.exon1;Parent=g4044.t1 NODE_1627_length_10135_cov_39.1653 . CDS 8760 9974 . - 0 ID=cds.g4044.t1;Parent=g4044.t1;5_prime_partial=true NODE_1627_length_10135_cov_39.1653 . three_prime_UTR 8065 8759 . - . ID=g4044.t1.utr3p1;Parent=g4044.t1 #PROT g4044.t1 g4044 RAIYGVLTARAVGEYFIGYFTSDFRKRRPRGAGKPTKEELEAEAAAAQAKEQQQQSLLHPDAGAGHHKRSPSTHKLGLTVGHSSHNVLGNSGGGNNKSNATTPQKRSTSTTDAPTPAATAVPVPSKGPTTPGVSSPSNPFDSLVLPSLREGHASTGPDGHPDSSHVVPSPSLAHAQEVSVGGGDATAGSNGDAHGGDADRGHVLKHEDSMVVESVTTESDHADDADEMHAHAHSHVHDETQDDAHGSTSAIAGGAGRTPAKKTSVGSKVTAGKPHNGKTPLKSSSGTSMGSGNVTPKTVTKASGGKTATHPPAGASVLKNAASASTGSMPSLKPAHKKGIAASSEKITPLNLGTANGKGGARTPTHSHSSSNVDGERPQSANSAAGEDLKLPRIKSAERRPIES* # PASA_UPDATE: g4042.t1, single gene model update, valid-1, status:[pasa:asmbl_2190,status:3], valid-1 NODE_1627_length_10135_cov_39.1653 . gene 2930 4920 . + . ID=g4042;Name=g4042.t1 NODE_1627_length_10135_cov_39.1653 . mRNA 2930 4920 . + . ID=g4042.t1;Parent=g4042;Name=g4042.t1 NODE_1627_length_10135_cov_39.1653 . five_prime_UTR 2930 3156 . + . ID=g4042.t1.utr5p1;Parent=g4042.t1 NODE_1627_length_10135_cov_39.1653 . exon 2930 3224 . + . ID=g4042.t1.exon1;Parent=g4042.t1 NODE_1627_length_10135_cov_39.1653 . CDS 3157 3224 . + 0 ID=cds.g4042.t1;Parent=g4042.t1 NODE_1627_length_10135_cov_39.1653 . exon 3368 4920 . + . ID=g4042.t1.exon2;Parent=g4042.t1 NODE_1627_length_10135_cov_39.1653 . CDS 3368 4625 . + 1 ID=cds.g4042.t1;Parent=g4042.t1 NODE_1627_length_10135_cov_39.1653 . three_prime_UTR 4626 4920 . + . ID=g4042.t1.utr3p1;Parent=g4042.t1 #PROT g4042.t1 g4042 MPAFIQLWNGRNSILEDYYRTLAEADAAREVEYKAAVVIQSAWRGYHVRRHLKFLADHATVIQRYYRGLVGRRIFTVVVLEMRRKRRMAYYHHMATLIQKTWRGFHCRKYVSNFYTRKRFLEGLVKKNEAVARELDLYEQQRREDKRRDAEEKERLATIRIASHLHHLVGTKNIPGVLANPVTMHTRTAGDVVIDEEQVKQTFSLRLAKSVGGPTISVSTASRRTLGTTASHPQYIAADGRENPLGAISATPNNMTESVDGSSVAFRGEGSTSPSILLGVHPGHQHHVHASHGHSNSRFAATNSAYTFKSEATVSLPAIRTAKVQGPFKAPEEVHKLRSLPLRPSLRVATAYESELEARNAERQQEYIARVTDRPFVVPAHGKAPAYVPSVHARTTYGAIDYGTKTFRDDRREGRAHDADFKTVVSPIPIFDDYAAKQEGY* # ORIGINAL: g13991.t1 original gene structure, not modified by PASA NODE_3287_length_3821_cov_44.1514 AUGUSTUS gene 52 755 . + . ID=g13991;Name=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS mRNA 52 755 . + . ID=g13991.t1;Parent=g13991;Name=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS exon 52 93 . + . ID=g13991.t1.exon1;Parent=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS CDS 52 93 . + 0 ID=cds.g13991.t1;Parent=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS exon 369 426 . + . ID=g13991.t1.exon2;Parent=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS CDS 369 426 . + 0 ID=cds.g13991.t1;Parent=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS exon 616 755 . + . ID=g13991.t1.exon3;Parent=g13991.t1 NODE_3287_length_3821_cov_44.1514 AUGUSTUS CDS 616 755 . + 2 ID=cds.g13991.t1;Parent=g13991.t1 #PROT g13991.t1 g13991 MIWHPDKFDGPEKDGAEKKFIDIASAKEVLTDDEKRARFDAGEDPLDPEQQQQHQQQHHGGFPFGGGGGGNQHFQFHWG* # PASA_UPDATE: g13992.t1, single gene model update, valid-1, status:[pasa:asmbl_5838,status:12], valid-1 NODE_3287_length_3821_cov_44.1514 . gene 1465 3765 . - . ID=g13992;Name=g13992.t1 NODE_3287_length_3821_cov_44.1514 . mRNA 1465 3765 . - . ID=g13992.t1;Parent=g13992;Name=g13992.t1 NODE_3287_length_3821_cov_44.1514 . five_prime_UTR 3716 3765 . - . ID=g13992.t1.utr5p1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 3374 3765 . - . ID=g13992.t1.exon1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 3374 3715 . - 0 ID=cds.g13992.t1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 3169 3262 . - . ID=g13992.t1.exon2;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 3169 3262 . - 0 ID=cds.g13992.t1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 2853 2911 . - . ID=g13992.t1.exon3;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 2853 2911 . - 2 ID=cds.g13992.t1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 2398 2597 . - . ID=g13992.t1.exon4;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 2398 2597 . - 0 ID=cds.g13992.t1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 2002 2138 . - . ID=g13992.t1.exon5;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 2002 2138 . - 1 ID=cds.g13992.t1;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . exon 1465 1844 . - . ID=g13992.t1.exon6;Parent=g13992.t1 NODE_3287_length_3821_cov_44.1514 . CDS 1465 1844 . - 2 ID=cds.g13992.t1;Parent=g13992.t1 #PROT g13992.t1 g13992 MPMESNEFASSAQPYGIGVPERLAHRQSNSNFSINNKNNNNNNNNSHNYFEYSTNQPSAYVESVSAEAEVDWSAPLSTGEDECGNDPFSRGQAVICGLEGCSSPEMLYWAKSQKFLDDVVHGRFDRVEIAVRDYLSAGWFDRFFCADIWASDAKTSNNAVQIASLYGNVRILAFLVDCGGLKPLVDSCNPGTGATPLILTAIHGHTPAANFILANGGTVDKRDTYGRTALHWAVCKMHIDTVRLLLRHGADPHAKTNTGETPLSMAKDYNIRLAIEEAIDGVSHQTAHDNTSFHSSSPHTHAVPTTATSTAGAASRASVSSSHTAPAPSFASTSVQSSAAFAVKERASSANTRSSFSFSLLGAREMGGRRGSARDQPHVRYTSLPHGADESDDSLLTSHDALL* # PASA_UPDATE: g9208.t1, single gene model update, valid-1, status:[pasa:asmbl_8063,status:12], valid-1 NODE_541_length_21559_cov_38.5187 . gene 19040 21232 . - . ID=g9208;Name=g9208.t1 NODE_541_length_21559_cov_38.5187 . mRNA 19040 21232 . - . ID=g9208.t1;Parent=g9208;Name=g9208.t1 NODE_541_length_21559_cov_38.5187 . five_prime_UTR 21100 21232 . - . ID=g9208.t1.utr5p1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 21049 21232 . - . ID=g9208.t1.exon1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 21049 21099 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 20818 20895 . - . ID=g9208.t1.exon2;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 20818 20895 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 20593 20709 . - . ID=g9208.t1.exon3;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 20593 20709 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 20327 20431 . - . ID=g9208.t1.exon4;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 20327 20431 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 19991 20128 . - . ID=g9208.t1.exon5;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 19991 20128 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . exon 19040 19740 . - . ID=g9208.t1.exon6;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . CDS 19324 19740 . - 0 ID=cds.g9208.t1;Parent=g9208.t1 NODE_541_length_21559_cov_38.5187 . three_prime_UTR 19040 19323 . - . ID=g9208.t1.utr3p1;Parent=g9208.t1 #PROT g9208.t1 g9208 MSLYPTLEDLTVDTMAKAQVAQVQQTQRMIAAAPPGTTVLVPAGGLYSSLYGDVGLEDYMGVSLAQYQQVQSQYAITPYAPPPVQSQAVQPMQYSAGALSPAILNIKRAEIKDGVRQLSVCRDAKGKMGIAVKSINKGVFVSGVWRDSAASLAGLRVGDQILQIDGVNVAGFDSSKALNVLKKAPGPQIAITVRDRPFERIITMKKDSTEHMGFVFHNGKINKIVKDSSAARNGLLIEHNFLEVNGVNVVGLPDKDVLDIIAQGGDTVTLTIMPSFIFETLVKNLSDGMLRKLMDRSVPDI* # ORIGINAL: g9206.t1 original gene structure, not modified by PASA NODE_541_length_21559_cov_38.5187 AUGUSTUS gene 4753 9130 . + . ID=g9206;Name=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS mRNA 4753 9130 . + . ID=g9206.t1;Parent=g9206;Name=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 4753 4798 . + . ID=g9206.t1.exon1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 4753 4798 . + 0 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 5094 5300 . + . ID=g9206.t1.exon2;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 5094 5300 . + 2 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 5553 5698 . + . ID=g9206.t1.exon3;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 5553 5698 . + 2 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 6209 6410 . + . ID=g9206.t1.exon4;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 6209 6410 . + 0 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 6598 6918 . + . ID=g9206.t1.exon5;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 6598 6918 . + 2 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 7243 7579 . + . ID=g9206.t1.exon6;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 7243 7579 . + 2 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 7863 7981 . + . ID=g9206.t1.exon7;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 7863 7981 . + 1 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 8324 8373 . + . ID=g9206.t1.exon8;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 8324 8373 . + 2 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 8644 8720 . + . ID=g9206.t1.exon9;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 8644 8720 . + 0 ID=cds.g9206.t1;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 9040 9130 . + . ID=g9206.t1.exon10;Parent=g9206.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 9040 9130 . + 1 ID=cds.g9206.t1;Parent=g9206.t1 #PROT g9206.t1 g9206 MKSAKRPKAEVEDCDEATVESKGKRPKTDGDSDVGGASAVSSHPSARPVESAVNPRRLRHVTQRKEPAAGDAVVYWMSRDQRVHDNWALLYAQHTAIALGVPLVVVFNVVPTFLEATERQYGFMLKGLKEVESGLRALNIGFRLTMGDPRVTIPATVAELRARVAVVDFSPVRVPLGWVAAVAASLNTAGVPFVQVRDDGDKCEYAARTIRSKIHTKMGEFLTEYPPLLRHPTAPPTVATQPVDWVAADASLTIDRTVKEVAGIPAGHAAGMAVLARFCEKGTKAYGTQRNDPTKGALSGVSPYLHFGQISPQRCILAAVGAKKTIGAKSKEIVASCDAFIEECLVRRELADNFCFFNPAYDRLEGAYAWARETLEAHSADAREFVYEEGELERGETHDLLWNAAQLQMVRDGKMHGFLRMYWAKKILEWTASPSEALRIAIRLNDRYSVDGRDPNGYVGCMWSIAGIHDQGWGERAVFGKIRFMNYAGCKRKFDVDAFIARYPSKPTGKAVAEKRSVEKYGKKKGPSTYK* # ORIGINAL: g9205.t1 original gene structure, not modified by PASA NODE_541_length_21559_cov_38.5187 AUGUSTUS gene 1725 4136 . - . ID=g9205;Name=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS mRNA 1725 4136 . - . ID=g9205.t1;Parent=g9205;Name=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 4062 4136 . - . ID=g9205.t1.exon1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 4062 4136 . - 0 ID=cds.g9205.t1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 3671 3736 . - . ID=g9205.t1.exon2;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 3671 3736 . - 0 ID=cds.g9205.t1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 3310 3414 . - . ID=g9205.t1.exon3;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 3310 3414 . - 0 ID=cds.g9205.t1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 2874 3118 . - . ID=g9205.t1.exon4;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 2874 3118 . - 0 ID=cds.g9205.t1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 2325 2461 . - . ID=g9205.t1.exon5;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 2325 2461 . - 1 ID=cds.g9205.t1;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS exon 1725 2119 . - . ID=g9205.t1.exon6;Parent=g9205.t1 NODE_541_length_21559_cov_38.5187 AUGUSTUS CDS 1725 2119 . - 2 ID=cds.g9205.t1;Parent=g9205.t1 #PROT g9205.t1 g9205 MRVLSIARLASSGQARRSLHVAATTNIPKSVKVVEVGPRDGLQNEKQLITTPTKLKLIDMLGKTGLKTIECTSFVSPKWVPQMGDHAEILKQLVRLPGVSYPVLAPNMKGFETAVAAGADEICIFGAASEAFQKKNINATIEESLARNEEVCRLAKEKGVRLRGYVSCVVGCPYEGDIDPKKVAYVAKRLLDMGCYEISLGDTIGVGTPGTFATMLRAVLSVIDKDKLAVHCHDTYGQALANIYVSLEHGISVVDSSVAGLGGCPYAKGASGNVATEDVVYMMRGMGIETGVQLAPLVDAGAFISGVLGRDPASKVAKAILAKEGRLPSQIAAGAQAAKC* # PASA_UPDATE: g9204.t1, single gene model update, valid-1, status:[pasa:asmbl_8060,status:12], valid-1 NODE_541_length_21559_cov_38.5187 . gene 154 883 . - . ID=g9204;Name=g9204.t1 NODE_541_length_21559_cov_38.5187 . mRNA 154 883 . - . ID=g9204.t1;Parent=g9204;Name=g9204.t1 NODE_541_length_21559_cov_38.5187 . five_prime_UTR 678 883 . - . ID=g9204.t1.utr5p1;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . exon 634 883 . - . ID=g9204.t1.exon1;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . CDS 634 677 . - 0 ID=cds.g9204.t1;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . exon 397 511 . - . ID=g9204.t1.exon2;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . CDS 397 511 . - 1 ID=cds.g9204.t1;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . exon 154 201 . - . ID=g9204.t1.exon3;Parent=g9204.t1 NODE_541_length_21559_cov_38.5187 . CDS 154 201 . - 0 ID=cds.g9204.t1;Parent=g9204.t1 #PROT g9204.t1 g9204 MTASDGRLTGDEIGGLVVGTFFLSLLVLLLVYCIGRFLSNNKGSNTVAPAVVWLDVRLDVSRGSFAVV* # PASA_UPDATE: g9207.t1, single gene model update, valid-1, status:[pasa:asmbl_8061,status:12],[pasa:asmbl_8062,status:12], valid-1 NODE_541_length_21559_cov_38.5187 . gene 9651 17888 . - . ID=g9207;Name=g9207.t1 NODE_541_length_21559_cov_38.5187 . mRNA 9651 17888 . - . ID=g9207.t1;Parent=g9207;Name=g9207.t1 NODE_541_length_21559_cov_38.5187 . five_prime_UTR 17585 17888 . - . ID=g9207.t1.utr5p1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . five_prime_UTR 16820 16849 . - . ID=g9207.t1.utr5p2;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 17585 17888 . - . ID=g9207.t1.exon1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 16688 16849 . - . ID=g9207.t1.exon2;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 16688 16819 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 16401 16532 . - . ID=g9207.t1.exon3;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 16401 16532 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 15981 16088 . - . ID=g9207.t1.exon4;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 15981 16088 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 15458 15532 . - . ID=g9207.t1.exon5;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 15458 15532 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 14550 15002 . - . ID=g9207.t1.exon6;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 14550 15002 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 14193 14244 . - . ID=g9207.t1.exon7;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 14193 14244 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 13824 13870 . - . ID=g9207.t1.exon8;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 13824 13870 . - 2 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 13208 13356 . - . ID=g9207.t1.exon9;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 13208 13356 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 12953 13005 . - . ID=g9207.t1.exon10;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 12953 13005 . - 1 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 12203 12585 . - . ID=g9207.t1.exon11;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 12203 12585 . - 2 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 12022 12087 . - . ID=g9207.t1.exon12;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 12022 12087 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 11699 11797 . - . ID=g9207.t1.exon13;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 11699 11797 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 11271 11416 . - . ID=g9207.t1.exon14;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 11271 11416 . - 0 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 10776 10976 . - . ID=g9207.t1.exon15;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 10776 10976 . - 1 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . exon 9651 10507 . - . ID=g9207.t1.exon16;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . CDS 10219 10507 . - 1 ID=cds.g9207.t1;Parent=g9207.t1 NODE_541_length_21559_cov_38.5187 . three_prime_UTR 9651 10218 . - . ID=g9207.t1.utr3p1;Parent=g9207.t1 #PROT g9207.t1 g9207 MYAQQQQQQQQQQQQLKGGYPSLGHVHPGQIPAAPAAQPMVAYKSSVAESCDQIKNEFKFLETQCAQLKQDLDKATQEKNEIHRAYMSYHDLSYSLNLDLHKLNEINKRFYTIISSMMPLLPGEMQQQFTAHIDRAKNVSIQELEESLRPRRLMQLPGGGVGPSGLLGSAPQAQSLGHMQGQPQQQQQPQQQQQQHQHQQQQQQLAGLGAHPQHLQQQQIVGGMGYGGPQGMQSQQQQPQQQQQQQQQQQQQQQQHQQQQQQQGQQGQTRDPQQPSAAGGLLALSQMSSAQVPMPIKEERGMYESKRSNGADAADRKSRSGSPPSKRLKADDEHRGTEERDDGRDRSPGNDGDAPHDLQRHDSFDGGRNDISDDMRRAREADGAGPKRPKAKRHTDAPKHAGITSPHPQPPPGPAAPGAVPHQPQMFAPYGGLPTRPSAPSPVNASADNTKGLQIMQPSRAIGGNVKRVYSQYVNPDGSVAPFPFPADALTGPGIPKEARLVATLPHGEVVCAVAISHNSRQVYTGGKGCVKVWDCQNPSTKPLADLQCLGTHYIRSCKLLPDSRTLIVGGETNSLAIWDVGAAQPRMKGTLQSPAPACYALAINPAGTLCFSCCSDGNINVWDIQNQKLIKTFNGHADGVSCVDITRDGTQLLTGGLDHTVRVWDIVNMKNMSVESLDFGRQIFSLGVSPYEPWVAVGLDDNKVEVLNLESRGKYQLSVHESCVLSLKYAHSGKWFLTTGKDYTLNGWRSPFGALLFQAREPSSILTCDISRDDEYVVTGSGNRSAALYKVHY* # ORIGINAL: g8025.t1 original gene structure, not modified by PASA NODE_3078_length_4380_cov_43.9289 AUGUSTUS gene 2814 3969 . - . ID=g8025;Name=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS mRNA 2814 3969 . - . ID=g8025.t1;Parent=g8025;Name=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS exon 3873 3969 . - . ID=g8025.t1.exon1;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS CDS 3873 3969 . - 0 ID=cds.g8025.t1;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS exon 3637 3742 . - . ID=g8025.t1.exon2;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS CDS 3637 3742 . - 2 ID=cds.g8025.t1;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS exon 3345 3524 . - . ID=g8025.t1.exon3;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS CDS 3345 3524 . - 1 ID=cds.g8025.t1;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS exon 3008 3222 . - . ID=g8025.t1.exon4;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS CDS 3008 3222 . - 1 ID=cds.g8025.t1;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS exon 2814 2890 . - . ID=g8025.t1.exon5;Parent=g8025.t1 NODE_3078_length_4380_cov_43.9289 AUGUSTUS CDS 2814 2890 . - 2 ID=cds.g8025.t1;Parent=g8025.t1 #PROT g8025.t1 g8025 MLGARLHVVPPQPFKTGLLPQMEALAAKLHLQSGAPAYLIPVGGSNATGFWGYVEAFRELMEQGLTDSFDDIVMACGSGGTACGIAVANALSGAKVAVHAITVCDSQEYFHGHVNETLAELGLGHQFRSEDILDVVDGYKGKGYALSTDAELAFIVNCARSTGILLDPVYTGKAAFGMVSIMNSDPRRFKGKRVLFIHTGGLFGLYDRRIEPHILSPSAILTDP* # PASA_UPDATE: g8024.t1, single gene model update, valid-1, status:[pasa:asmbl_5522,status:12], valid-1 NODE_3078_length_4380_cov_43.9289 . gene 148 1989 . - . ID=g8024;Name=g8024.t1 NODE_3078_length_4380_cov_43.9289 . mRNA 148 1989 . - . ID=g8024.t1;Parent=g8024;Name=g8024.t1 NODE_3078_length_4380_cov_43.9289 . five_prime_UTR 1586 1989 . - . ID=g8024.t1.utr5p1;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . exon 905 1989 . - . ID=g8024.t1.exon1;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . CDS 905 1585 . - 0 ID=cds.g8024.t1;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . exon 535 630 . - . ID=g8024.t1.exon2;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . CDS 535 630 . - 0 ID=cds.g8024.t1;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . exon 148 305 . - . ID=g8024.t1.exon3;Parent=g8024.t1 NODE_3078_length_4380_cov_43.9289 . CDS 148 305 . - 0 ID=cds.g8024.t1;Parent=g8024.t1;3_prime_partial=true #PROT g8024.t1 g8024 MDIVEPELLVELCSLLEKDSPPDVAVVERLVIHVGQRTLLELLRQQNFVTADECGRVCAVLRVWVNTRWHADFVGNPDMLKLLEYLLADMERAVPDAERACDGVRVETVLMSQERRSSTSSETNSEVLEFLELQSDPVGVAAALKKIDLEKFKKYHVCGNLLSARRASVSGQCPHVGWGRECESKRTAVQDIQNWSFALSSWVEEVVQQATPQQAKPLVSLLIAVAKESVDRGNLQAAFTIVKGLSDESIAATVQAAVSAGRDGKKLKKLRALADPTDTYKAHSAELEKIPLTVYPIVPFLGMCFAHIFPL # ORIGINAL: g6706.t1 original gene structure, not modified by PASA NODE_1937_length_8451_cov_39.1675 AUGUSTUS gene 221 3107 . + . ID=g6706;Name=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS mRNA 221 3107 . + . ID=g6706.t1;Parent=g6706;Name=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 221 312 . + . ID=g6706.t1.exon1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 221 312 . + 1 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 695 817 . + . ID=g6706.t1.exon2;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 695 817 . + 2 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 1156 1333 . + . ID=g6706.t1.exon3;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 1156 1333 . + 2 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 1640 1807 . + . ID=g6706.t1.exon4;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 1640 1807 . + 1 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 2185 2325 . + . ID=g6706.t1.exon5;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 2185 2325 . + 1 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 2516 2747 . + . ID=g6706.t1.exon6;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 2516 2747 . + 1 ID=cds.g6706.t1;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS exon 3018 3107 . + . ID=g6706.t1.exon7;Parent=g6706.t1 NODE_1937_length_8451_cov_39.1675 AUGUSTUS CDS 3018 3107 . + 0 ID=cds.g6706.t1;Parent=g6706.t1 #PROT g6706.t1 g6706 NVCKADPTAVEAFEAALFPPFELILQMDVAEFTPYVFQILSQLLESRPAPIPASYRAMLPLLVTPLLWERLGNVPPLVRLVQAFLAKGVAESGGNDWLLGILGVFQKLIASKQNDHEGFYLMESIIQHVPIAVVTPFLKQVFILLFQRLQSSRTPKYVRGLLVFMSLLAGTHGPAILVETVDGIQPRLFAMVAQSLYINEVQKVSGSTERKICAVGMTKILTESPFVSQYFDLWPLFLAAIVRLFELEEDDSGATGEDGFVEIEDTPGYQAAFTQLAFASKADKDPFVAIPDAKIFLAQRLAALSQSLPGKLSPLISGLDPAVANFLQRYLLAAGIPALA* # PASA_UPDATE: g6707.t1, single gene model update, valid-1, status:[pasa:asmbl_3056,status:3], valid-1 NODE_1937_length_8451_cov_39.1675 . gene 3674 8401 . - . ID=g6707;Name=g6707.t1 NODE_1937_length_8451_cov_39.1675 . mRNA 3674 8401 . - . ID=g6707.t1;Parent=g6707;Name=g6707.t1 NODE_1937_length_8451_cov_39.1675 . five_prime_UTR 8178 8401 . - . ID=g6707.t1.utr5p1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . exon 7905 8401 . - . ID=g6707.t1.exon1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . CDS 7905 8177 . - 0 ID=cds.g6707.t1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . exon 7253 7708 . - . ID=g6707.t1.exon2;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . CDS 7253 7708 . - 0 ID=cds.g6707.t1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . exon 4625 7012 . - . ID=g6707.t1.exon3;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . CDS 4625 7012 . - 0 ID=cds.g6707.t1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . exon 3674 4444 . - . ID=g6707.t1.exon4;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . CDS 4001 4444 . - 0 ID=cds.g6707.t1;Parent=g6707.t1 NODE_1937_length_8451_cov_39.1675 . three_prime_UTR 3674 4000 . - . ID=g6707.t1.utr3p1;Parent=g6707.t1 #PROT g6707.t1 g6707 MAIPNRRRTGIILIVLGVGALALGFGIGFGLPTVVFKTVDRMVQWPSYDGDSGYLDWLNNDDVDDVPYYQYIYLFNITNPQAFLYGGQAPVMAEVGPYVYRYIKRKFDVAWPTDDTVSFKEYGFQVFDASLSFAGAKPTQDQIFQINIIYTRALTSLRLLSVMSGVLASRIAQSTAPTACNGITPATVPTSPACQLALRQLPEFGPSVAATDADQVLFVYMAASITANVLTAIDNVMPSVLTSAFVASIPSTTVSNIVGASGGGALITAATTVLAGSSGATKAAYDAACTTISSIKCYNAIYSLNPTIDCAGLPDVSPECPGGGVTTTAFRVAATAFHYRTIIAPSMQFTWATWQAVLGLPSFANTNSYLYGYDTPTGVPSGTGIWKWADQNQIPNLAGGFSLNGTQATQMVTVLLQPTFNAIQSNYFTGMQTFYGSPPASNNFAYPTTIATATKRQLSLYQFGAGGAAGGGGQSLVNMTSWAAIRTGLAAQGVVLPFPPGFNNLELFSFAKQVYTFPSELSAGTISPLTLNDTLKIYSVLTASSPLGSFLSTASALRTQAATVSSMANPAVAAAVKAGGNGAVVGDILPIALPAAAFYVSTVKTETGTPAACTACDVGGVLCAANTYATNSNTAACFEWAQAQADFATRAVNNASSPANGDASALNALKTACGGFLAGSVSASLASTNPVTQGTCLVYLYTTYQSRFTALDAIMTACGIPSVPQLTRYLARGLFGDTTTVRDACVNAINATALTSVNAVRKAISDATALFSTTVNFDLASWTHGGSFSTYENARVNIEIFAGYALASQMPMVAQYFDGQNKGLVVRHSAADFALGGFTDDFYVSLTQGLSGPTPGFTTNYSSLAAATQFAPKYTYNIGKFDRGLVGNYYAKDGSRTIASTYYPNITASRPDLLLYRGSDGTQFHPAKRQNVLLDFDTPYASAYEVWVTQVSRTVPLARDDNYKIEGILLNRFRLKQTALNNTDAINKLYGVTLSGTQPVSNDRGFLSYVSLPRFLHGEPSLLALYPNIVPNGDLHDSYLGIEPITGATMQARKRLQGNLGIECRYWSPAFSGTYMRYNISKTYCNVPVPYYWIGEQSEINRHKANEFKKKVYGAAKAGVAAIVIGVVTGVVMLTVGAVLLIKHKQSSKVMTVDHSGPNDVHMEPVQFNDDAAGGAHPTTNANAWA* # PASA_UPDATE: g9835.t1, single gene model update, valid-1, status:[pasa:asmbl_1957,status:3], valid-1 NODE_1557_length_10490_cov_43.52 . gene 4998 8471 . - . ID=g9835;Name=g9835.t1 NODE_1557_length_10490_cov_43.52 . mRNA 4998 8471 . - . ID=g9835.t1;Parent=g9835;Name=g9835.t1 NODE_1557_length_10490_cov_43.52 . five_prime_UTR 8289 8471 . - . ID=g9835.t1.utr5p1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . exon 8100 8471 . - . ID=g9835.t1.exon1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . CDS 8100 8288 . - 0 ID=cds.g9835.t1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . exon 7513 7956 . - . ID=g9835.t1.exon2;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . CDS 7513 7956 . - 0 ID=cds.g9835.t1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . exon 6861 7342 . - . ID=g9835.t1.exon3;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . CDS 6861 7342 . - 0 ID=cds.g9835.t1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . exon 6151 6520 . - . ID=g9835.t1.exon4;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . CDS 6151 6520 . - 1 ID=cds.g9835.t1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . exon 4998 5942 . - . ID=g9835.t1.exon5;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . CDS 5415 5942 . - 0 ID=cds.g9835.t1;Parent=g9835.t1 NODE_1557_length_10490_cov_43.52 . three_prime_UTR 4998 5414 . - . ID=g9835.t1.utr3p1;Parent=g9835.t1 #PROT g9835.t1 g9835 MDETAAQDASAHVCPAEDGDAGLEVAVTSDESNPLPPEIAALPRDETVCRFCGVSYLIHREIKALEKTSKELRDKLTHYEGYDAREQDYIRRQQEDARHLSDTEAMLSEAKSRCEGLEELLTGANDRASTFQRLLERDKEDLASLRQSAVASQSELESLRLREASLSQERAQLQGDCVRAKEDAESHKKKADAAERELEGLKARLTELRKERETSVGQLAASADELISIKGELVAASKRAAEASEALSTQRLKTDELAREIEFASTRKSQADGAVAELERTVATLRTELQSVRVADEGKSEELSRARTECERWKGEHVRAVEKLFAADEELKSLRAEREVLKASTSKSMQEATRELKSLREERESMITAHQAQIQQLQESFLDRIRAAELRLPEEIAEMERKFNEDREKCVAEYESKLQSLSKKAADERAQLQREKESAVSEASRALDDAVKQTAARIRTECDAEISRKEDAFAQRLEAAKKDSLFAAENTRGDITRLSQENEYLRKVASDMEARVHEAQRAASEAVHRANEQVHAIASQLSSRDSKINILEETVKSQCEEREELLDALREGKAPAIHPLDKPTAEQLARMQHDDNGDGGSNDGRATPSKKLFGLFGGKGKEGGKGARTPDASVIVPEENPQDKEWRKLRKGLGANTVAKGKRTAKVAPM* # PASA_UPDATE: g9834.t1, single gene model update, valid-1, status:[pasa:asmbl_1958,status:12], valid-1 NODE_1557_length_10490_cov_43.52 . gene 1957 4351 . + . ID=g9834;Name=g9834.t1 NODE_1557_length_10490_cov_43.52 . mRNA 1957 4351 . + . ID=g9834.t1;Parent=g9834;Name=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 1957 2072 . + . ID=g9834.t1.exon1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 1957 2072 . + 0 ID=cds.g9834.t1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 2259 2710 . + . ID=g9834.t1.exon2;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 2259 2710 . + 1 ID=cds.g9834.t1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 2885 3000 . + . ID=g9834.t1.exon3;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 2885 3000 . + 2 ID=cds.g9834.t1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 3481 3614 . + . ID=g9834.t1.exon4;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 3481 3614 . + 0 ID=cds.g9834.t1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 3784 3942 . + . ID=g9834.t1.exon5;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 3784 3942 . + 1 ID=cds.g9834.t1;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . exon 4303 4351 . + . ID=g9834.t1.exon6;Parent=g9834.t1 NODE_1557_length_10490_cov_43.52 . CDS 4303 4351 . + 1 ID=cds.g9834.t1;Parent=g9834.t1 #PROT g9834.t1 g9834 MPGRCHGVRKLVRGRGALIGASLLLVFVLLAINMRLYDRIMSGKRDLFGIELERAQCDPASRKYNAAAFLMFRDSAKYLKEWIEFHLLVGFDHFYMFDNESTDDFRTVLQPYIQTGVVTLDHFPTVMRINLFGQMEIDTQKHGIKEGLLRYRCETKWIMVFDSDEFVFTTAPSTSVIDYLEKNHYEDSCGGVAVYELQYGSSGHLTPPKGLVMENFTWRKQEVDTGKKVFLLSDRVAGFWNTHWYFFRDGYPLCDEKKRPLIHKTFGARSDLGILREVDLLRINHYYTKSAQDWKERLDRGTISGANANFDWDLFKKSDTNEVEDRTIERYYPEMRKRMGL* # PASA_UPDATE: g9836.t1, single gene model update, valid-1, status:[pasa:asmbl_1959,status:3], valid-1 NODE_1557_length_10490_cov_43.52 . gene 8784 10300 . + . ID=g9836;Name=g9836.t1 NODE_1557_length_10490_cov_43.52 . mRNA 8784 10300 . + . ID=g9836.t1;Parent=g9836;Name=g9836.t1 NODE_1557_length_10490_cov_43.52 . five_prime_UTR 8784 8939 . + . ID=g9836.t1.utr5p1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . exon 8784 9021 . + . ID=g9836.t1.exon1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . CDS 8940 9021 . + 0 ID=cds.g9836.t1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . exon 9214 9278 . + . ID=g9836.t1.exon2;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . CDS 9214 9278 . + 2 ID=cds.g9836.t1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . exon 9445 9858 . + . ID=g9836.t1.exon3;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . CDS 9445 9858 . + 0 ID=cds.g9836.t1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . exon 10049 10300 . + . ID=g9836.t1.exon4;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . CDS 10049 10102 . + 0 ID=cds.g9836.t1;Parent=g9836.t1 NODE_1557_length_10490_cov_43.52 . three_prime_UTR 10103 10300 . + . ID=g9836.t1.utr3p1;Parent=g9836.t1 #PROT g9836.t1 g9836 MPDQHYSGMHTLEFGLQYHAAAPLSYGGRCVLKRKADEVLSMGDEERAVKRLSSHDNEFRTMNDPIDATMEMHVDGVEQEPHHYNNLSAIHMGSAAPSMYASSDGLRINGESQMQYGSMSSVTTTAAAIPTANGVQSGFIAEEDAYSSAHGYRRAMQNPTMYESNPEEMDEAALYAMCDQHMAGARGDLDMFPGAWRRHCNGQY* # ORIGINAL: g9833.t1 original gene structure, not modified by PASA NODE_1557_length_10490_cov_43.52 AUGUSTUS gene 118 1462 . - . ID=g9833;Name=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS mRNA 118 1462 . - . ID=g9833.t1;Parent=g9833;Name=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS exon 1261 1462 . - . ID=g9833.t1.exon1;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS CDS 1261 1462 . - 0 ID=cds.g9833.t1;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS exon 996 1123 . - . ID=g9833.t1.exon2;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS CDS 996 1123 . - 2 ID=cds.g9833.t1;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS exon 732 842 . - . ID=g9833.t1.exon3;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS CDS 732 842 . - 0 ID=cds.g9833.t1;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS exon 118 315 . - . ID=g9833.t1.exon4;Parent=g9833.t1 NODE_1557_length_10490_cov_43.52 AUGUSTUS CDS 118 315 . - 0 ID=cds.g9833.t1;Parent=g9833.t1 #PROT g9833.t1 g9833 MRQLFVLACVALLIGTVVSVAHATDGLDFDDSDYEIPRPPSKFSVVVRDADPVEMDIDQLLEVFTKNGMKAVRVIKDGVPVELPGGFNAMEMTYFLAKQSETMKSLHSEKIETKQSKIEALEKENPVLYRFIKFGRALFADLKKNGVAKADDPSYPHHFVLTVDAGAKKGISRYEVTIEMVDGILELRSLYKITESHSRIKAIDIKPFLAIVK # ORIGINAL: g248.t1 original gene structure, not modified by PASA NODE_1056_length_14372_cov_42.9702 AUGUSTUS gene 111 1356 . + . ID=g248;Name=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS mRNA 111 1356 . + . ID=g248.t1;Parent=g248;Name=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 111 290 . + . ID=g248.t1.exon1;Parent=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 111 290 . + 0 ID=cds.g248.t1;Parent=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 681 751 . + . ID=g248.t1.exon2;Parent=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 681 751 . + 0 ID=cds.g248.t1;Parent=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 1071 1356 . + . ID=g248.t1.exon3;Parent=g248.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 1071 1356 . + 1 ID=cds.g248.t1;Parent=g248.t1 #PROT g248.t1 g248 FHGDTIHLSVFRDGAEQVIPLTLAAPNKLIPLYSDSLPPPYFIVAGLVFVPCSESYLKSEYGADYDFDAPVRILEKMLYGHKSSPDDQIIVLSQVLAAPVNVGYEDLSNLQLIRFNGVPVHNLRHLVQLVSTCTDQYFRFEMDEDEIVIIDSRHANEQLPSLLATHSIPADRSVNLRF* # PASA_UPDATE: g250.t1, single gene model update, valid-1, status:[pasa:asmbl_212,status:12], valid-1 NODE_1056_length_14372_cov_42.9702 . gene 5139 14183 . + . ID=g250;Name=g250.t1 NODE_1056_length_14372_cov_42.9702 . mRNA 5139 14183 . + . ID=g250.t1;Parent=g250;Name=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 5139 5330 . + . ID=g250.t1.exon1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 5139 5330 . + 0 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 5441 5578 . + . ID=g250.t1.exon2;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 5441 5578 . + 0 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 5728 5792 . + . ID=g250.t1.exon3;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 5728 5792 . + 0 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 5907 6071 . + . ID=g250.t1.exon4;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 5907 6071 . + 1 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 6251 6478 . + . ID=g250.t1.exon5;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 6251 6478 . + 1 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 6576 13960 . + . ID=g250.t1.exon6;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 6576 13960 . + 1 ID=cds.g250.t1;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . exon 14098 14183 . + . ID=g250.t1.exon7;Parent=g250.t1 NODE_1056_length_14372_cov_42.9702 . CDS 14098 14183 . + 2 ID=cds.g250.t1;Parent=g250.t1 #PROT g250.t1 g250 MDRKIRLLVSSALATLSAQKIEEAHRLLQGYQDVLLKGGQAATDLLGDSLSDDLYIVCAEAAIELNKYDEAKDCLKWFFLLDPPANQFLCRGYFCQALVEAQAVTSSRDSESQLKAISYIMKALAIARRNPRYAFLVYNASVLYWRLSRPFFKEGYRRHLLWTLPTIVKALEEVDDKDYEWRARFNIHLARCYEECGKTDDALVVINAAASIVRQHVPKLRHEVYRLQVRYNRTHPKDIIALEKEAKDAPELAAICKLEKIRGGSITDNVHVEKDLSEAFRGLVAYLGIDANGEMERGRAGTLSKSNEALGYSLIVEMGRIALDRGIFGLAQNAVDMARNAPQPAQRIQSEYLACELMVRMLGPKGEVCTRKVLDVRLEALGRIERALLSAERLGDAKNMQSGCALIWNIALPLLQPNLRHHVKKMFMTAAQVLETLDSPLTQLRCQLHIELAKCEEEEELMVKAQEQVAKAISLDFTGAYSRWLESARQRLEIKTQIYAEITRTEDQVLVMLEQASEAKDDDLRRAMLERAGSLLAPDVFDVGVPPISGSSWSSASERIRSYRQTEREKGAKKGPHSASDKERAQLWADIAKSARHRQLGDVARKASEFFLEYQWDLETERDFVRLQAQVHFIRAEALMQLIKREGLQPCESPTLERKIAEGYGRPTDEEWADYTSWTIGMSHQEVESFMCALELGAQLKEDWIVLNAAVYLWNYHIHIFRANQHWKLHEPLLRTFEALKGISESDVPLLAQIANAFALSLIQRAERGATAGDVFGSGFAGGAERQVVSNAPVAVDKKDRARGKGKGMPGEGDIGKGQDQVDVRRALEVCEHALSLSSPAEKKFLVPTWVHLRNVLGHPYSIEDEKSPETKVMVALELMALRDQQGSTTHSPANVDVLQAMATMADCRFGPALEIEMWTRLANEALLAGQFDASVRCGKKAIAIDTQEDRLRKAKEDKRVEKAKKTVAGTQQMQTLAHGNKERREDCNYELLHVACRLMGQGTIGKIDPLKQDKSHQDKLRREALAHFARSARYGEKAGHHALVLNAALHFWNACIPFIGSAITRKMLVVPLQSILTQLATMAPDSGSAEAMRDSQLQVGGTAKATKSDGASDPSAAVSGAVAGEEGSGTTGRRGAHAAGTDVRVRMYELLFECLIDQLRWSEGLRTVNQAFSMLPREMHKTLWKYRIIFKCRLGQSPSSDMNKLQDETEEIQAKVWHTIAESAPNRQDALAAFQRGIALLKDTSLRLVKAEYLVEFGEWLYRADFPIADAIAQLEAAVDLLMDPDNPAPQFHATPATPSGDKDLSSNSASNIVARRPSASPGSGRKNTKGGVGSKGNVPRRGSKPHLVPGGAPSSQVATTPATPLLDGSISDLPAIEDTTILLGVRRLEMLARGYVMLAKICGHSTDQRVDYCLLAHYYFMKVWEATAHAVSLITMRAETDASSGAPAGNAAASKQDKEKREKEEKDKERRGNKSAPKRLSRTGTSTDHGMLLPSSLEDWADFDYKDDFRRACVGPEATPLMVCASTVVKPDLFVFYMNVLVRLLKGHGYFLHCLPLLQLLRLVADVVMNNPLLVRLVHLELMDICVELNLGEAAQFHESHASVVGLTDAERAQSREEVRQRCQQLKLVAEARQDAHDGNGATQPGGAETGGKKGRPEFILPKEGVIVSVDTGTTKVLEPVTMREIWVSQAEILVRHGHYAVARELLCEVLLHAKAFSDNMVRGRALMCQAHLKRLESKREGAAELVQLAQGLGGDFDFWQRSTLELADDIAHDPQRLGEVRDILEHALAVFDEVATRHPNAANDSQRAQAVFRARVASIRLQQAAQLRVTDASFSREIEAGLSLYEESVDQMELLGGGAVYVDTLLEYATVTRRVFTPAAENATQRRDVGAMRLLRRADNECERMLAEVRSHQAGAAISLPVQRQAARVKVAIGNLLLDMHIARVSAEREKARMKATSHASATPASRKLEDCIAEYLDDTADLDADLREWQEIARTADQDAVVSLSGALNLSGNVASVRALSGLQLGRCLRQLSVQCSDSLNNWMSCVPANGSGDAGGASSDSGNDVPDIVHPDAAHDTGRHHAGLSITASLIDVIPRHGLGGSETVPPTPGVREFNPFLPQPDVQTGTDGQDDTASQAAAAKADEPLSIQYLRQAFSHLIESVTSALEAGAIDTARAAALEVMECYGSMDPVVTGAHVCLYQACCAYASLVDTFRIASRDGGAARERAIMNQIAVMAREHCDPHLNCSAFRGALETLSARNKAYGRIAVPPSIVESIVELLPPDFRVVVLQHSPDRKLLYGTVLWKKEEDRPLPSTSRSNQAQAAPQPTSPMDLLQAVAARIDVDPQAMDAVVRSFARFKFDVEKGMIRRHKESQLRKVHVPAAVVAVTTKVKKEVGKKKQQQQQQQQQQQQQQQTSLSEDRPMDIDPLTGEPAAEEQPPDEFEEEMSVEFSSVVAEMEAVIGPLIACLAPALGSNRPTSAPPAPEPSAPPTQPVGSPSMANLSALIAQANALSQDGSPMQIVVILDGVLCALPIEALSVFTAPHVRAVSRDVSLQMLLCRLRATKATPTDAAAEDVKKGTAKPPLDRKMSKQEDKMKPKDVKQDAFKGRKASLLSEVDGGGGSAVALVDPANVRYVVDAREECKGMIGADDNASTAFATELRAFHSVTSKWAGVYGTDHMPSVGEFQRMLSQASGFFFFGLGRCLSYVSPRHVAGLDMSNAGVVVLLDHVQTEDSHRRQSKLDVKKT* # ORIGINAL: g249.t1 original gene structure, not modified by PASA NODE_1056_length_14372_cov_42.9702 AUGUSTUS gene 2431 4272 . - . ID=g249;Name=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS mRNA 2431 4272 . - . ID=g249.t1;Parent=g249;Name=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 4147 4272 . - . ID=g249.t1.exon1;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 4147 4272 . - 0 ID=cds.g249.t1;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 3774 3990 . - . ID=g249.t1.exon2;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 3774 3990 . - 0 ID=cds.g249.t1;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 3294 3350 . - . ID=g249.t1.exon3;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 3294 3350 . - 2 ID=cds.g249.t1;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS exon 2431 2996 . - . ID=g249.t1.exon4;Parent=g249.t1 NODE_1056_length_14372_cov_42.9702 AUGUSTUS CDS 2431 2996 . - 2 ID=cds.g249.t1;Parent=g249.t1 #PROT g249.t1 g249 MDAIDDDEYESLPTSNLYAHMCAGAMAGMMEHCAMYPVDLLKTRQQSLSPSTLPVSIYRSLQTLVQREGFPAIWRGFKAVALGSGPAHALYFSSYEICKEWFGGNRPGQHPFATGFAGMFATLVHDGFMNPFDVIKQRMQVEGTQYKTALECARAVQRNEGVWAFYRSYTTQLTMNIPFQMLHFASYDSFQKFLNPAGTYDPMTHMIAGAGAGALAAAATTPLDVAKTLLNTQENLPDQRGRAYINGMVDAVRTIYRVNGLGGFTKGLRARVVFQMPSTALSWSVYEFFKHILTFNESIAKAAGVDADALPELHKRETVKP* # PASA_UPDATE: g808.t1, single gene model update, valid-1, status:[pasa:asmbl_5755,status:12],[pasa:asmbl_5756,status:12], valid-1 NODE_3238_length_3940_cov_31.384 . gene 88 2467 . + . ID=g808;Name=g808.t1 NODE_3238_length_3940_cov_31.384 . mRNA 88 2467 . + . ID=g808.t1;Parent=g808;Name=g808.t1 NODE_3238_length_3940_cov_31.384 . five_prime_UTR 88 88 . + . ID=g808.t1.utr5p1;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . exon 88 219 . + . ID=g808.t1.exon1;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . CDS 89 219 . + 0 ID=cds.g808.t1;Parent=g808.t1;5_prime_partial=true NODE_3238_length_3940_cov_31.384 . exon 500 602 . + . ID=g808.t1.exon2;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . CDS 500 602 . + 1 ID=cds.g808.t1;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . exon 1000 1380 . + . ID=g808.t1.exon3;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . CDS 1000 1380 . + 0 ID=cds.g808.t1;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . exon 1797 2467 . + . ID=g808.t1.exon4;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . CDS 1797 2027 . + 0 ID=cds.g808.t1;Parent=g808.t1 NODE_3238_length_3940_cov_31.384 . three_prime_UTR 2028 2467 . + . ID=g808.t1.utr3p1;Parent=g808.t1 #PROT g808.t1 g808 HVLFSLAATQVSEPLNLVQFFATFFACFFSLLFIAFIVWRIKTRYDRFRAARDRIVELRIMATRPAASVLIVDLFDPSHLSKTAVSTPSLRFGCTRDITNRNKNDNNNNNNSNKKKSSSKNSNNKSSNPSSNTARGESDCPPVPPPVAVEFCAGNKAAIATFVIDLPARDPRERVVSLGSTLVACPSACAWMSTSQEEQMKDDGKLSTTGNGYQHTRSSTQTSLGSATNNAFSLFSRTRSPTSPGSTRSGSGVAGMRQTRTSAALHTSTVAPAATPGAVPE* # PASA_UPDATE: g206.t1, single gene model update, valid-1, status:[pasa:asmbl_5768,status:12],[pasa:asmbl_5769,status:12],[pasa:asmbl_5770,status:12], valid-1 NODE_3246_length_3921_cov_40.793 . gene 175 3797 . + . ID=g206;Name=g206.t1 NODE_3246_length_3921_cov_40.793 . mRNA 175 3797 . + . ID=g206.t1;Parent=g206;Name=g206.t1 NODE_3246_length_3921_cov_40.793 . five_prime_UTR 175 175 . + . ID=g206.t1.utr5p1;Parent=g206.t1 NODE_3246_length_3921_cov_40.793 . exon 175 307 . + . ID=g206.t1.exon1;Parent=g206.t1 NODE_3246_length_3921_cov_40.793 . CDS 176 307 . + 0 ID=cds.g206.t1;Parent=g206.t1;5_prime_partial=true NODE_3246_length_3921_cov_40.793 . exon 745 2624 . + . ID=g206.t1.exon2;Parent=g206.t1 NODE_3246_length_3921_cov_40.793 . CDS 745 2624 . + 0 ID=cds.g206.t1;Parent=g206.t1 NODE_3246_length_3921_cov_40.793 . exon 3510 3797 . + . ID=g206.t1.exon3;Parent=g206.t1 NODE_3246_length_3921_cov_40.793 . CDS 3510 3797 . + 1 ID=cds.g206.t1;Parent=g206.t1;3_prime_partial=true #PROT g206.t1 g206 AVGLGDSVEMRYTGWLVSGGAIGQMFDTNVNKDKAHRFKIGAGKVIKGWDEGVVGMKKSGRRLIVIPPALAYGDKSPAANVPANSTLLFEVQAIKVKIGSGGGDAKEAAAPAAATATSSAATAGAKPPVASKPDAAAVEESRVRAASRGHSSEDLRARTSSLNEAMSTPGEGGKAKVISRMAKLGRATLPFKGAVAATPDTEDDDLEESQPPSPAPAQQPQPVVAARPVPSPRPTQEAVAQPQNQQQQPQQQQQQQQQQQQQQPQQQQQQQQQQQQQQQQPQQQQYAQGQYTLSPPGPAQMYSSQPSAYAVQQHQLAVYQRPMDGNSQYYAQPPPQQPMYAPPPQQPQYVPMPQQHQPPPLGYYDPNAPIDGSPVGLVVESRRQHADLRTQIVDISNKLDSLRGSIGGGVGGFSGAGYGGGYDAPDAAALMKGVQRVVSENERLKKELSEKTARVESMGDRVTQLLEANQKQIEQSTAMLARVQMQGGESSSAAVQQLQLRIASLEKEKSLLADGEAEMRREVATLRAELSTARLSGADVSGKTAELSAQLREEKSSKRELQSKVTELEEELSEAKADADTAKRASQQAKKKLQTEKERLDAEIEQLRTEHEAELAKAKEALRKAQSTSSSASATGATAADIANARAEVEAAWTERAKKMVRDAEDAAARRHSEAEARAKSAADEAAHLRAMVAQLEAKVKEAQGGAGAAEESLRRQIADVEAKLKSAELSALEAHAKGRAEGAAAAEDASRAPANGGGNHAEEIK # ORIGINAL: g2927.t1 original gene structure, not modified by PASA NODE_5900_length_685_cov_239.211_potentialcontaminant AUGUSTUS gene 2 408 . + . ID=g2927;Name=g2927.t1 NODE_5900_length_685_cov_239.211_potentialcontaminant AUGUSTUS mRNA 2 408 . + . ID=g2927.t1;Parent=g2927;Name=g2927.t1 NODE_5900_length_685_cov_239.211_potentialcontaminant AUGUSTUS exon 2 408 . + . ID=g2927.t1.exon1;Parent=g2927.t1 NODE_5900_length_685_cov_239.211_potentialcontaminant AUGUSTUS CDS 2 408 . + 2 ID=cds.g2927.t1;Parent=g2927.t1 #PROT g2927.t1 g2927 RLCTTSFSTRCFQLTLCLVRPGLMPSLSTSRSMATFRASHAHSFTSGASSLYSGYIWRTWTCRPSTSRCRHRRLWGLYSTSIPCQQDLRGSCGNFRRALRSTSPLPLMMPRTWDPELHSSHEASMRSTNRYVIFS # ORIGINAL: g4417.t1 original gene structure, not modified by PASA NODE_3637_length_3072_cov_39.8799 AUGUSTUS gene 203 2902 . + . ID=g4417;Name=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS mRNA 203 2902 . + . ID=g4417.t1;Parent=g4417;Name=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 203 575 . + . ID=g4417.t1.exon1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 203 575 . + 2 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 792 1005 . + . ID=g4417.t1.exon2;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 792 1005 . + 1 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 1300 1410 . + . ID=g4417.t1.exon3;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 1300 1410 . + 0 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 1657 1740 . + . ID=g4417.t1.exon4;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 1657 1740 . + 0 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 2135 2299 . + . ID=g4417.t1.exon5;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 2135 2299 . + 0 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 2659 2706 . + . ID=g4417.t1.exon6;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 2659 2706 . + 0 ID=cds.g4417.t1;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS exon 2894 2902 . + . ID=g4417.t1.exon7;Parent=g4417.t1 NODE_3637_length_3072_cov_39.8799 AUGUSTUS CDS 2894 2902 . + 0 ID=cds.g4417.t1;Parent=g4417.t1 #PROT g4417.t1 g4417 GVCGAVAAAVAVVSTRRNNRPLSTTCALFLRDKTTGIPLEAATARAREIIKPSILDHWNVRVPVKDVVWAAVGRTSVGDPVALPPVTAAGTMAAEVSKARVYADANVYRPREYWDYETFEVEWNGPDKYEIVRKVGRGKYSEVFQGINVAAGEPCIVKILKPVKKKKIKREIKILQNLSGGVNVISLLDVVRDPISKVPSLVFEYVNNTDFKVLYPTLGDYDVRYYIYELLKALDFCHSRGIMHRDVKPHNVMIDHQKRKLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFASMIFKKEPFFHGHDNYDQAF* # ORIGINAL: g3907.t1 original gene structure, not modified by PASA NODE_364_length_25908_cov_41.4798 AUGUSTUS gene 9116 10986 . - . ID=g3907;Name=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS mRNA 9116 10986 . - . ID=g3907.t1;Parent=g3907;Name=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 10944 10986 . - . ID=g3907.t1.exon1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 10944 10986 . - 0 ID=cds.g3907.t1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 10648 10767 . - . ID=g3907.t1.exon2;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 10648 10767 . - 2 ID=cds.g3907.t1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 10213 10445 . - . ID=g3907.t1.exon3;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 10213 10445 . - 2 ID=cds.g3907.t1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 9993 10039 . - . ID=g3907.t1.exon4;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 9993 10039 . - 0 ID=cds.g3907.t1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 9499 9796 . - . ID=g3907.t1.exon5;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 9499 9796 . - 1 ID=cds.g3907.t1;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 9116 9358 . - . ID=g3907.t1.exon6;Parent=g3907.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 9116 9358 . - 0 ID=cds.g3907.t1;Parent=g3907.t1 #PROT g3907.t1 g3907 MEPSGEAFEEFMQLRAFLYEFESDGPHLKWFELDATCRAVKWKSSSDAVEWEGKIFLRNIQDLVTGETKALVSLQNSPLFRKSRQSAVAPGGIVPYVSLVTRKRTMHIAFIDGSEYGTWMRGLIFLTGITPTDYSIKQKKDKGSRHRTPSYLTRESSSSSLGSLRTGSHSMRRDDRIESRLLALENESSGGSISGGVRGLRQRGRQNAGLSHDDASLLHTLLDENRILVSTCERQARTIGELREELQMLRETLAQLQMEEDEESEYRGGHNRSYHAIEDDEDEDKDDDMESHLRGEIEVLKEALAAKDATIEGLCDIVSGGRDTWDD* # PASA_UPDATE: g3906.t1, single gene model update, valid-1, status:[pasa:asmbl_6354,status:12],[pasa:asmbl_6358,status:12], valid-1 NODE_364_length_25908_cov_41.4798 . gene 6872 8872 . + . ID=g3906;Name=g3906.t1 NODE_364_length_25908_cov_41.4798 . mRNA 6872 8872 . + . ID=g3906.t1;Parent=g3906;Name=g3906.t1 NODE_364_length_25908_cov_41.4798 . five_prime_UTR 6872 6920 . + . ID=g3906.t1.utr5p1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 6872 7263 . + . ID=g3906.t1.exon1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 6921 7263 . + 0 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 7375 7439 . + . ID=g3906.t1.exon2;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 7375 7439 . + 2 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 7592 7720 . + . ID=g3906.t1.exon3;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 7592 7720 . + 0 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 7909 7995 . + . ID=g3906.t1.exon4;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 7909 7995 . + 0 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 8169 8548 . + . ID=g3906.t1.exon5;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 8169 8548 . + 0 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . exon 8691 8872 . + . ID=g3906.t1.exon6;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . CDS 8691 8715 . + 1 ID=cds.g3906.t1;Parent=g3906.t1 NODE_364_length_25908_cov_41.4798 . three_prime_UTR 8716 8872 . + . ID=g3906.t1.utr3p1;Parent=g3906.t1 #PROT g3906.t1 g3906 MRPIGFAALVVAVIIVGVNSTCTKPHSVPPFDDATYYQNAKGKTGTALQLALNAIVKQNAIRYSYSCVWNIIQDADEDATNTNNVILLYKRTSVPKTSMASSDTAGVGTWNREHVWAKSHGFPTEGLPAYTDGHHLRASDPQANAERGNKGFDDGGSVAKKCDICHTDSNSWEPPDTSKGDVARMLFYMATRYAVAEGSMPKLVLDNADGPDNQPRIGRLCTLIKWHNADPVSDYERRRNTAVYAWQQNRNPFIDHPEFVNSIFNCDLLSAGGLVTSDVERDSSSDGQSAGHGGSSFPIIAVAVGCSVGAAALVAFAVVVTRRRNQAMLDTAEAGLKEALLS* # PASA_UPDATE: g3911.t1, single gene model update, valid-1, status:[pasa:asmbl_6356,status:12],[pasa:asmbl_6357,status:12],[pasa:asmbl_6360,status:12], valid-1 NODE_364_length_25908_cov_41.4798 . gene 20437 25878 . + . ID=g3911;Name=g3911.t1 NODE_364_length_25908_cov_41.4798 . mRNA 20437 25878 . + . ID=g3911.t1;Parent=g3911;Name=g3911.t1 NODE_364_length_25908_cov_41.4798 . five_prime_UTR 20437 20457 . + . ID=g3911.t1.utr5p1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 20437 21737 . + . ID=g3911.t1.exon1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 20458 21737 . + 0 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 22019 22194 . + . ID=g3911.t1.exon2;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 22019 22194 . + 1 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 22467 23178 . + . ID=g3911.t1.exon3;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 22467 23178 . + 2 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 23490 23621 . + . ID=g3911.t1.exon4;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 23490 23621 . + 1 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 23960 24135 . + . ID=g3911.t1.exon5;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 23960 24135 . + 1 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 24421 24603 . + . ID=g3911.t1.exon6;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 24421 24603 . + 2 ID=cds.g3911.t1;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . exon 25289 25878 . + . ID=g3911.t1.exon7;Parent=g3911.t1 NODE_364_length_25908_cov_41.4798 . CDS 25289 25878 . + 2 ID=cds.g3911.t1;Parent=g3911.t1 #PROT g3911.t1 g3911 MPRVAVLALFLSVCSCAVLAAQAAAVRRAATAPDPACQADCADAVVPAGCASLPPTTANTALVVSSCMTVASGTYVFQYVNIVAGGILFFVDDGGEINFAASSILVENGGSLVAGAYCKPFGCSGGKLEIGLYGADPTDSGKTAPTTPGIQCVGTGGCYDPSLVGMCCTASGTNPCSNSTCPSTNYNAYFEGYSNNGLNFDGANNFFGFKVLAVSYGGTLKMFGRKGVAASDYSNTRAKTCPVPSVDHDALGWATLSGNGWGRLNADIAAGDTSFATDRPVTVEAGDKVIITTTDWYVNHTEYAVVSESVQSGQQVSISDPLKFRHLGTMTRVDPSLTGSSGNPNGDVDGRAAFALLSRSIVVRSLGATANDAFPAPSACGTDGSGSVTPACFFGGHVIARQGFAAFQVQGVEFYQLGQGGRMGHYPVHFHLAKSAAYTDAFVRDSSIWDSMTRFITLHGTHHVELSRNVGYLSVGHGFYLEDGSEINNLLCYNLGVSARSATTEMTKAQDPESALYRAVPGILDATNAGGPMSPMSGATNFQGSDYLQPTMFWIMNGANEFVGNMAVGCHGYGSCYWLLGSSLSGSSYSLHWTSGTYTIEDAPTWIKDAGRQAPLYRFRGNQCSTATYALQTTLFVDPSNLGVAMYSTLQSPYSTAVGSNFMRPLIQGNFNPSMPNSIGAACASQLPVGNDMSMQVISCVATVIDRLRASYNWPSASFGSVWLRENWFMVTNSAITDQLGGGLGFVSGGDWSQSPQGYFAITFNSVYIGSTAPDDVYAGALGPSVTGLACAAVCPMPDQGTGIFTGAFNPKRMITIYDGPFFSEGSVFVNVSSTICNLPDQCGVYASTTEPVTGTPNSIGYYPQMNVVNAAIGWKQVNAASCAVSYYPPAFVFAKSAFSQNTLRHNVIDQYQLYGTGSNVAPVIQGYNVYSSGGNVTPLDATTILLDVDGTLTGAVTSNYSRTSSVSNNLFFDAPSVVPECNSYGVQTSPYDLVSTVMANIGPGSGGNIAFNVKLGLWGRSPIIPIYRQLTLPNDTCASPFNVCASGTLGLGCSRASVMGGTQTSQAPYLTMNHGGRCHAD* # ORIGINAL: g3908.t1 original gene structure, not modified by PASA NODE_364_length_25908_cov_41.4798 AUGUSTUS gene 11452 13709 . + . ID=g3908;Name=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS mRNA 11452 13709 . + . ID=g3908.t1;Parent=g3908;Name=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 11452 11511 . + . ID=g3908.t1.exon1;Parent=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 11452 11511 . + 0 ID=cds.g3908.t1;Parent=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 11628 12033 . + . ID=g3908.t1.exon2;Parent=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 11628 12033 . + 0 ID=cds.g3908.t1;Parent=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 12238 13709 . + . ID=g3908.t1.exon3;Parent=g3908.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 12238 13709 . + 2 ID=cds.g3908.t1;Parent=g3908.t1 #PROT g3908.t1 g3908 MDVSDDDRFFLSEDEEGAQEFQSPHSTRLASTDKAIVHLDIDAFYVAAERHRRPDLVGIPVAVSQHNRGGFVAVSYEAKAMGIRKGDGVGDKGREAIEHLRDRISLEDACGKCPGLVVLLMDMPFYRSVSEGMLAVVKRYAAVVEKTSIDDFTLVDATDEALKLLEQSPTLFSSDNIKVYGPHAPSPLLVAASSVCSSVRQALFEEYGATSSASIAPSKIVARLASPTAKPNGQVIVPADAVEALVGSTLLEDVPYLGGRLAPALQSAFGASFLGELLCAPLSDLVRVCGQARGEWLHEAIRGRDACGVVPRGAPKSIMAEASFGPQKSAAALSARTSPLVTDLMLRLVVHWRKWRTMPRSLSVRWREGYRKMSAHSVPFPYAVLHWIRSVPQPVQAPPQPSSSSFAINDECCDDDARSGGDPIDNAELGEPLRHDQIHVPEAITNKGVDIVISAICRHLVASGGAGEARRAGEYTTDATLGPGITRLALVACAFGENAAGAGQLSIDSFAAVRADGAHTHGGLMQKQAIANGAATTDCNGIERAPRTTANGVAFEDARDGGFLCVDCGCAVFFETREEHTDLHIAQRFARRDGDIDLSVGAKRSVQSTVKAVPLSKPNSISKARKAKTAPLKSTLEAYFALKPR* # PASA_UPDATE: g3909.t1, single gene model update, valid-1, status:[pasa:asmbl_6363,status:3], valid-1 NODE_364_length_25908_cov_41.4798 . gene 14077 15837 . - . ID=g3909;Name=g3909.t1 NODE_364_length_25908_cov_41.4798 . mRNA 14077 15837 . - . ID=g3909.t1;Parent=g3909;Name=g3909.t1 NODE_364_length_25908_cov_41.4798 . five_prime_UTR 15790 15837 . - . ID=g3909.t1.utr5p1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . exon 15749 15837 . - . ID=g3909.t1.exon1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . CDS 15749 15789 . - 0 ID=cds.g3909.t1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . exon 15429 15581 . - . ID=g3909.t1.exon2;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . CDS 15429 15581 . - 1 ID=cds.g3909.t1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . exon 15196 15307 . - . ID=g3909.t1.exon3;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . CDS 15196 15307 . - 1 ID=cds.g3909.t1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . exon 14077 14944 . - . ID=g3909.t1.exon4;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . CDS 14240 14944 . - 0 ID=cds.g3909.t1;Parent=g3909.t1 NODE_364_length_25908_cov_41.4798 . three_prime_UTR 14077 14239 . - . ID=g3909.t1.utr3p1;Parent=g3909.t1 #PROT g3909.t1 g3909 MKELDGDWKCAAPACGASNFARRSDCHKCGILKPVAKLVQGGTVGKDIAEKSKGLFSADDWTCGKCGNINWQRRRTCNQCNHPRHAKQEERTGFGGGFNERQGVEYKDRVESDDEYDEFGRKKKKFRGSAAVQAEDRSVGRESNRSGSDGGGTGERRSGGSVSRRDGDDGTGGNDDDDDDDDDVDLSKYQLDEPDEPALPTSAAEQKDTSSKSLKNVDGESVSATVKSSLPPQRRSRSPPPRSERRRSRSRSPADRSRHRSRSRSRSPRRDERRDDRRGGHSNRRSRSRSRGRDEKDSGRRPTERRRSRSRSRDRSRRHYDRSRSRSRSRSPPRRR* # ORIGINAL: g3903.t1 original gene structure, not modified by PASA NODE_364_length_25908_cov_41.4798 AUGUSTUS gene 74 799 . - . ID=g3903;Name=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS mRNA 74 799 . - . ID=g3903.t1;Parent=g3903;Name=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 624 799 . - . ID=g3903.t1.exon1;Parent=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 624 799 . - 0 ID=cds.g3903.t1;Parent=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 306 469 . - . ID=g3903.t1.exon2;Parent=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 306 469 . - 1 ID=cds.g3903.t1;Parent=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 74 187 . - . ID=g3903.t1.exon3;Parent=g3903.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 74 187 . - 2 ID=cds.g3903.t1;Parent=g3903.t1 #PROT g3903.t1 g3903 MERSVSFQGSLQSGVSDGFSSYHSHESSLNLDDGGSIVSFGSASIVSDTTTAGNSSIVRERNVHLQLLRSGSLRQYCGALSESGKFSTFILVIIFCNTIVIALQATSSISRNAGFFLSIIDGIFLGIYIFEATIKIYVERRHYFGSSWNRF # PASA_UPDATE: g3905.t1, single gene model update, valid-1, status:[pasa:asmbl_6361,status:3], valid-1 # PASA_UPDATE: g3905.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6362,status:12], valid-1 NODE_364_length_25908_cov_41.4798 . gene 4282 6218 . - . ID=g3905;Name=g3905.t1 NODE_364_length_25908_cov_41.4798 . mRNA 4282 6218 . - . ID=g3905.t1;Parent=g3905;Name=g3905.t1 NODE_364_length_25908_cov_41.4798 . five_prime_UTR 6191 6218 . - . ID=g3905.t1.utr5p1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . exon 5733 6218 . - . ID=g3905.t1.exon1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . CDS 5733 6190 . - 0 ID=cds.g3905.t1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . exon 5386 5508 . - . ID=g3905.t1.exon2;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . CDS 5386 5508 . - 1 ID=cds.g3905.t1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . exon 5096 5210 . - . ID=g3905.t1.exon3;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . CDS 5096 5210 . - 1 ID=cds.g3905.t1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . exon 4780 4870 . - . ID=g3905.t1.exon4;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . CDS 4780 4870 . - 0 ID=cds.g3905.t1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . exon 4282 4520 . - . ID=g3905.t1.exon5;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . CDS 4366 4520 . - 2 ID=cds.g3905.t1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . three_prime_UTR 4282 4365 . - . ID=g3905.t1.utr3p1;Parent=g3905.t1 NODE_364_length_25908_cov_41.4798 . mRNA 4282 6218 . - . ID=g3905.t1.1.5b6be70b;Parent=g3905;Name=g3905.t1 NODE_364_length_25908_cov_41.4798 . five_prime_UTR 6191 6218 . - . ID=g3905.t1.1.5b6be70b.utr5p1;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . exon 5733 6218 . - . ID=g3905.t1.1.5b6be70b.exon1;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . CDS 5733 6190 . - 0 ID=cds.g3905.t1.1.5b6be70b;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . exon 5386 5508 . - . ID=g3905.t1.1.5b6be70b.exon2;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . CDS 5386 5508 . - 1 ID=cds.g3905.t1.1.5b6be70b;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . exon 5096 5210 . - . ID=g3905.t1.1.5b6be70b.exon3;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . CDS 5096 5210 . - 1 ID=cds.g3905.t1.1.5b6be70b;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . exon 4780 4870 . - . ID=g3905.t1.1.5b6be70b.exon4;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . CDS 4780 4870 . - 0 ID=cds.g3905.t1.1.5b6be70b;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . exon 4282 4655 . - . ID=g3905.t1.1.5b6be70b.exon5;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . CDS 4366 4655 . - 2 ID=cds.g3905.t1.1.5b6be70b;Parent=g3905.t1.1.5b6be70b NODE_364_length_25908_cov_41.4798 . three_prime_UTR 4282 4365 . - . ID=g3905.t1.1.5b6be70b.utr3p1;Parent=g3905.t1.1.5b6be70b #PROT g3905.t1 g3905 MRASWDINSVHFRYILSPMPKDQEAHSLKKSAIPFGSDSINRKSRRKRLRRRARKVLSSTVRTSVTISVNIGASLAKQTADASGSESSRERTEEDNSNMADGAAYRDALASKAPSSTERVVCEEMCTYCFDVIASELGQGPTPRKLSFPNASFPLFVTWNIQDHRDKEWTLRGCIGTFSAQPLHAGLREYALTSAFKDRRFSPIDARELRKLSCAVSLLTNFEQGKDYLDWKIGIHGIWIEFRDDSGKLRTATYLPEVAEEQGWTKLEAIDSLLRKGGFRGKIGDEMRSCIVLTRYQSEKISLTYDEYVRLPR* #PROT g3905.t1.1.5b6be70b g3905 MRASWDINSVHFRYILSPMPKDQEAHSLKKSAIPFGSDSINRKSRRKRLRRRARKVLSSTVRTSVTISVNIGASLAKQTADASGSESSRERTEEDNSNMADGAAYRDALASKAPSSTERVVCEEMCTYCFDVIASELGQGPTPRKLSFPNASFPLFVTWNIQDHRDKEWTLRGCIGTFSAQPLHAGLREYALTSAFKDRRFSPIDARELRKLSCAVSLLTNFEQGKDYLDWKIGIHGIWIEFRDDSGKLRTATYLPEVAEEQVISLFLRSSIPTIRRLTLPLCVSFRCVIIQEILTDFDSRVFVSGAGWTKLEAIDSLLRKGGFRGKIGDEMRSCIVLTRYQSEKISLTYDEYVRLPR* # ORIGINAL: g3910.t1 original gene structure, not modified by PASA NODE_364_length_25908_cov_41.4798 AUGUSTUS gene 16188 18859 . + . ID=g3910;Name=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS mRNA 16188 18859 . + . ID=g3910.t1;Parent=g3910;Name=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 16188 16525 . + . ID=g3910.t1.exon1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 16188 16525 . + 0 ID=cds.g3910.t1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 16672 16748 . + . ID=g3910.t1.exon2;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 16672 16748 . + 1 ID=cds.g3910.t1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 16886 16917 . + . ID=g3910.t1.exon3;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 16886 16917 . + 2 ID=cds.g3910.t1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 17157 17294 . + . ID=g3910.t1.exon4;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 17157 17294 . + 0 ID=cds.g3910.t1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 17894 18205 . + . ID=g3910.t1.exon5;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 17894 18205 . + 0 ID=cds.g3910.t1;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 18650 18859 . + . ID=g3910.t1.exon6;Parent=g3910.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 18650 18859 . + 0 ID=cds.g3910.t1;Parent=g3910.t1 #PROT g3910.t1 g3910 MPLPTHVAAGKADYAGYELPFNKRHGAGDGTAFSKLQFYLRSILSDKNSRNLFLFLCVNLSFTGVELMYGIWTNSLGLISDSFHMMFDCTALIVGLAATVIAKWPQNAAYTYGYSRAETVAGFTNAIFLIFISFFIFTESIERIMEPPEVNTDRLFLVSFLGLVVNLFGIFAFQGHGHSHFGGSSHSSAESGHDSDICEGYLRSLFPSLSSFPHPPTRPPTHAGVFLHVLADTLGSVGVMISSFLMYQFGWMMADPICSMCLSLMIFVSVIPLLRESASVLLQRSPKELDDKLPGCLEKISRIDGVVGHHNPHFWTLSSGFHIGTLCVVTRPDADNARILGLVQSIFKHAGVTEMVVQLERQNANLVY* # ORIGINAL: g3904.t1 original gene structure, not modified by PASA NODE_364_length_25908_cov_41.4798 AUGUSTUS gene 1684 4218 . + . ID=g3904;Name=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS mRNA 1684 4218 . + . ID=g3904.t1;Parent=g3904;Name=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 1684 1696 . + . ID=g3904.t1.exon1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 1684 1696 . + 0 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 1805 1932 . + . ID=g3904.t1.exon2;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 1805 1932 . + 2 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 2185 2245 . + . ID=g3904.t1.exon3;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 2185 2245 . + 0 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 2418 2509 . + . ID=g3904.t1.exon4;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 2418 2509 . + 2 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 2638 2731 . + . ID=g3904.t1.exon5;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 2638 2731 . + 0 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 2906 2980 . + . ID=g3904.t1.exon6;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 2906 2980 . + 2 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 3147 3225 . + . ID=g3904.t1.exon7;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 3147 3225 . + 2 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 3387 3402 . + . ID=g3904.t1.exon8;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 3387 3402 . + 1 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 3641 3723 . + . ID=g3904.t1.exon9;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 3641 3723 . + 0 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 3869 3924 . + . ID=g3904.t1.exon10;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 3869 3924 . + 1 ID=cds.g3904.t1;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS exon 4124 4218 . + . ID=g3904.t1.exon11;Parent=g3904.t1 NODE_364_length_25908_cov_41.4798 AUGUSTUS CDS 4124 4218 . + 2 ID=cds.g3904.t1;Parent=g3904.t1 #PROT g3904.t1 g3904 MASAAASCVRLALIQLSVGKDKAANVDSATSAIRDAAAKGARLVALPECFNSPYGTGFFPEYAEPIPGSIPEKDADGKLYNTSVIYGPDGAVLGKHRKVHLFDIDVPGRIRFKESETLSPGHNVTVVDTDFGRVGIAICYDIRFPELAQLMTRRGCKLLVYPGAFNMTTGPAHWELLQRARAVDNQLYVATVSPARDESAGYIAWGHSTVVNPWGEVVATTDEKAGTVFADIDLARVDEVRSSIPVSIQRRGDLYELTDKAPK* # PASA_UPDATE: g10486.t1, single gene model update, valid-1, status:[pasa:asmbl_5787,status:12], valid-1 NODE_3256_length_3908_cov_43.4699 . gene 1821 3333 . + . ID=g10486;Name=g10486.t1 NODE_3256_length_3908_cov_43.4699 . mRNA 1821 3333 . + . ID=g10486.t1;Parent=g10486;Name=g10486.t1 NODE_3256_length_3908_cov_43.4699 . five_prime_UTR 1821 1872 . + . ID=g10486.t1.utr5p1;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . exon 1821 1880 . + . ID=g10486.t1.exon1;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . CDS 1873 1880 . + 0 ID=cds.g10486.t1;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . exon 2004 2196 . + . ID=g10486.t1.exon2;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . CDS 2004 2196 . + 1 ID=cds.g10486.t1;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . exon 2323 3333 . + . ID=g10486.t1.exon3;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . CDS 2323 2976 . + 0 ID=cds.g10486.t1;Parent=g10486.t1 NODE_3256_length_3908_cov_43.4699 . three_prime_UTR 2977 3333 . + . ID=g10486.t1.utr3p1;Parent=g10486.t1 #PROT g10486.t1 g10486 MVGVTCVAAGMDVAPPPHNDKSEEEHSRPALSHSWQSADLNPKHLWRKDSGYVSEEEGYPGALPAAPANAEGDSVAADASAAIPDTRKRKLAVDAPALGVKDEQSSANVLLFLAQMSNSLLSTSSADASDAKDDERPVKRRRVVCAKDKAAAAAAATATAVAMAAVRADESDDDQDTSCSDDDDDSSQSASSPSDGRSMRRREKNREAAQLCRQKKKEFLHTVRDNVDRLIQINATVKSLLDDSIRRRNVVALENASLQDECGRLSSEIARLRARSVVSVAASS* # PASA_UPDATE: g10485.t1, single gene model update, valid-1, status:[pasa:asmbl_5786,status:12], valid-1 NODE_3256_length_3908_cov_43.4699 . gene 101 754 . - . ID=g10485;Name=g10485.t1 NODE_3256_length_3908_cov_43.4699 . mRNA 101 754 . - . ID=g10485.t1;Parent=g10485;Name=g10485.t1 NODE_3256_length_3908_cov_43.4699 . five_prime_UTR 684 754 . - . ID=g10485.t1.utr5p1;Parent=g10485.t1 NODE_3256_length_3908_cov_43.4699 . exon 428 754 . - . ID=g10485.t1.exon1;Parent=g10485.t1 NODE_3256_length_3908_cov_43.4699 . CDS 428 683 . - 0 ID=cds.g10485.t1;Parent=g10485.t1 NODE_3256_length_3908_cov_43.4699 . exon 101 219 . - . ID=g10485.t1.exon2;Parent=g10485.t1 NODE_3256_length_3908_cov_43.4699 . CDS 101 219 . - 2 ID=cds.g10485.t1;Parent=g10485.t1;3_prime_partial=true #PROT g10485.t1 g10485 MSAPGDKAPEKVTDSTDAVPASAPSDAAAAAAAATASEADRIRRQIITMQLQNSMQQQAPTAPRTIEESSRLAHKFWKSQPVPQFNEEVAEYGPIEADKEHVQQEPYNLPAGFEWDTLDINSQPQ # PASA_UPDATE: g8372.t1, single gene model update, valid-1, status:[pasa:asmbl_7109,status:12], valid-1 NODE_4217_length_2011_cov_36.3321 . gene 197 1929 . + . ID=g8372;Name=g8372.t1 NODE_4217_length_2011_cov_36.3321 . mRNA 197 1929 . + . ID=g8372.t1;Parent=g8372;Name=g8372.t1 NODE_4217_length_2011_cov_36.3321 . exon 197 286 . + . ID=g8372.t1.exon1;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . CDS 197 286 . + 0 ID=cds.g8372.t1;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . exon 706 746 . + . ID=g8372.t1.exon2;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . CDS 706 746 . + 0 ID=cds.g8372.t1;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . exon 944 1087 . + . ID=g8372.t1.exon3;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . CDS 944 1087 . + 1 ID=cds.g8372.t1;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . exon 1501 1580 . + . ID=g8372.t1.exon4;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . CDS 1501 1580 . + 1 ID=cds.g8372.t1;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . exon 1787 1929 . + . ID=g8372.t1.exon5;Parent=g8372.t1 NODE_4217_length_2011_cov_36.3321 . CDS 1787 1929 . + 2 ID=cds.g8372.t1;Parent=g8372.t1;3_prime_partial=true #PROT g8372.t1 g8372 MHSLVCHVIALLCSGVAYLHASNIMHCDLKSSNLLVNEQGIVKVSDFGLTQLRHPNDAPDPHNANRLGTILWQAPEVLLGSRYTQAADCYSFGIILWEILTRSVPYASIGLDLRGPNAAQSLVTLVEEIVRFNVRPSIPDTCVPEYAQLIKRCWTPEPLERPPFSE # ORIGINAL: g10545.t1 original gene structure, not modified by PASA NODE_862_length_16577_cov_53.8081 AUGUSTUS gene 6818 14662 . + . ID=g10545;Name=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS mRNA 6818 14662 . + . ID=g10545.t1;Parent=g10545;Name=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 6818 13627 . + . ID=g10545.t1.exon1;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 6818 13627 . + 0 ID=cds.g10545.t1;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 13932 14027 . + . ID=g10545.t1.exon2;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 13932 14027 . + 0 ID=cds.g10545.t1;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 14169 14239 . + . ID=g10545.t1.exon3;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 14169 14239 . + 0 ID=cds.g10545.t1;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 14359 14662 . + . ID=g10545.t1.exon4;Parent=g10545.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 14359 14662 . + 1 ID=cds.g10545.t1;Parent=g10545.t1 #PROT g10545.t1 g10545 MANLARLCSPLATAHLVIVVTSLLISCSCDRSQALSPPVFEQIFRFSSLDKIAGALKIIQRGRIEVTLAQGSYDWPVGGVDGAPASFAVPANVKLSLVVAPNNEPLSVDITVPDFSDTATRTPLFDVAKGGTVNLDGIQFRVNSPTVARVRSGGVLTMSRSSLVGLGVSKDVAALHVSGTATIDGTTFLRFLLMVYPPPEEPEVFRPEIFADGSAKVNITSSTLSSSDVVAAGASTVLLTSCVFDTCSSACIRANDTATVTLVTFTAVVPTFLKLLIASGDAHVLMARSDVSDGRPFAIDNSDTITVLPAIGSPGDSAITLSENATLTWTSSSLSVLERHALSLTGRAAAVLDTVDVTVVQGLGVWALGDDSRLSATKCRFAAAFVPTLGVLSGNAVAELDESTLSTLASRLFNVSSGARLSFRGGSVTLSPRLVANEDDHAITMSDNSVGLFDGVTIESKVVLGSVAFARHLFFVCGRARLVVRSSSFANVAGTVHALDEAVVSLASVLISAWVIRHDNIDSYEGGQAVMMIDAGRGGALWLEGRASVGMTRSTLSNLPRTLMGGVAFVDDSSTLLFEESSVSVAGGHIGTGGAFYVRSEALVTVRSSSFAGLFTVTYYDGVYGTVGGAGGFAFVVGAASLAVSNVSIAGVKCATDGGVVYAADRASVSLIGIHARDIIVLGTGGVICARGGANVSVSSAICTTLFVSLEGGGVYAAGSAIVHAEKLSVSDVTIHRGALFSARESANVTAYDCAVDGVVSDDAMSVVVSAIYNYKYPEYVTISAINWNRGPLVGAAVFAAGNATLNMDALALSNVFSQHDGAGIGLTDSAAVFVTRGAFSSLTTMGSGGAFWAVGRSSLEVSSANANITGAVVGGGGCAYVGGAARAKFVGVSASGVSAGSTGGGVHVTESATVTMDSCMFINATSNGLGGAVFADATGLIVIFDSEFHSCRANTRGGVIAASGNSNVSVINTKLSARAGVSGGCVALDKTANVSLMLSTLESCVAGSGGAVFAAGASLSHIVGSTFSNCHAQVGGAVLASDASRVAVSNCTLLNTTATEDGGVGASSGSGAIHITDSVSTGSRANNGGFASAYGSSALEFTRLSVFDAASAALGGSLYAAESAQVIVSLCEFVSTRSGAAGGFLAQIGMSHVDINATSLRDAWSDVGAAGIFVRGHATLSLSGFHAVRVLRALKPGEGWLSCPPDALIIYSNVTCDDCAPHPPDRLDAQMWAFFPNIMPYFPLLRLAPVLYSHTTVDSVLDRLLSGKEIVQSFYPITAAFYTLVTSRPLIGQALSFTQSTLRLSGIVAIKDLFLTSMRECVIEQSGAASFRGFAENSVVEVRGYADLTDFTIRHSTLVVSGIGVVNCMGCKFERIGRRRAVVVQADMLSGSPLLLSGLGLTRITESSFASISTAGSGGVAQVSGDAFLTVERCDVTSLSASGDGGFVSVTDDVGSTASPRVSLRSITARDIASGGNGGFVACAGKAIVKMDDCTLSEVRADGGGGLAFVTDVGTLKVRNCTVVGVIAKGELGGGTFALFGASTVQVFDSVINGSTAIKFGGVGSVSPSRELPDSLPRVEFRNVNVHIAHSGLSGGAFHVRGGEVSISGCQFSNCSADASGGFVQTFGDRPSSVVVFGCSFAHITAGISGGLINLNDDSMITLDQSRAVHVSAQQDGGLVAVSGGQMSVVSCDVEGSATLLGSGGCFAVESGTLSVSTSTFRSSVAALGGGFIALEAQGRATLLSVDVEGASATILGGGALSLTGLSIVAAANLTLRNVFAAGSGGGLLVDGLSELNLADAVVSDAASQFGWGGAVSVTGRGILNMTRVSIIRATAQGSGGAIASQNGARVLLDHVEVASSVAIAGDGGALACADRADVVANNLAIMDSSARAGSGGAIHTEGDAVLFATGGSIKASSSVMGGALSVVDAAAVALVRVNVYDSTSVSHGGCVYALSAMLTVSNSVFERCSAGNSTSLYSTGGVFYFGAADTAQTSIMHVRVTDAFASTGPVIFSTSLYNASVGIFAADPQYVTRFADGNNFFSSPPANLRFTVSGGASELSFAALEPGAFMPSFSVVMEDVYGQRAFAVPSSPLGIRLASNCSISGDLSRTFLLSSIVNYTSIRVSSSTLPTICRLYFESGNLLHDSEDPLFATADTFVQLTTCGPQSTLQAGQDNVLTCTAMSSSSSVSTTAIAVAFSVCGFCVLLLLLGFMYVRRVRRHWEEQQIEEFAKHMEKSTPDMVKYEIPRGTVELQEILGEGNFGVVYRAQVSIGHKLRICAAKSLKPGTSVDQRIEFIGEAQIMMGLSHPNVTSLVGVSTTEDPMLIIIEYLAHGSLKSFLSRLDRHRQATSSMEAIDLTLVGLASGIAAGMQYLAQNRIVHKASGSFDGSCNDLYTVAVLLYALTMSLYTGFICEPDVFPLPSAP* # ORIGINAL: g10546.t1 original gene structure, not modified by PASA NODE_862_length_16577_cov_53.8081 AUGUSTUS gene 15564 15836 . + . ID=g10546;Name=g10546.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS mRNA 15564 15836 . + . ID=g10546.t1;Parent=g10546;Name=g10546.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 15564 15836 . + . ID=g10546.t1.exon1;Parent=g10546.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 15564 15836 . + 0 ID=cds.g10546.t1;Parent=g10546.t1 #PROT g10546.t1 g10546 MERLRAELENVHTHRLPAKNAHEKESPYDNSNLHYDNVVTNDYNSGGFIGDNAYDNSVVVFPRAEGRCVSIDENRTLGEIALSVPVETGV* # PASA_UPDATE: g10543.t1, single gene model update, valid-1, status:[pasa:asmbl_9724,status:12], valid-1 NODE_862_length_16577_cov_53.8081 . gene 90 3314 . + . ID=g10543;Name=g10543.t1 NODE_862_length_16577_cov_53.8081 . mRNA 90 3314 . + . ID=g10543.t1;Parent=g10543;Name=g10543.t1 NODE_862_length_16577_cov_53.8081 . exon 90 281 . + . ID=g10543.t1.exon1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . CDS 90 281 . + 0 ID=cds.g10543.t1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . exon 718 933 . + . ID=g10543.t1.exon2;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . CDS 718 933 . + 0 ID=cds.g10543.t1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . exon 1205 1824 . + . ID=g10543.t1.exon3;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . CDS 1205 1824 . + 0 ID=cds.g10543.t1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . exon 2240 2474 . + . ID=g10543.t1.exon4;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . CDS 2240 2474 . + 1 ID=cds.g10543.t1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . exon 3038 3314 . + . ID=g10543.t1.exon5;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . CDS 3038 3247 . + 0 ID=cds.g10543.t1;Parent=g10543.t1 NODE_862_length_16577_cov_53.8081 . three_prime_UTR 3248 3314 . + . ID=g10543.t1.utr3p1;Parent=g10543.t1 #PROT g10543.t1 g10543 MVSDVAMFVNEGVRQMENFQKILAIQASIIGYEKSLVVPGRTFVREGRLHKMCRKGPKSRMFFLFSDCLIYASFQPLVAGMSQQYTVHMTIPLLNMRVKDLPYNQPNAELGFQLVNSSKSFSLYARTEKEKKEWTEDLRRTIDDNAIKQRSFAAPAVASPSSISKRSQRPSEAGMDPSVLGQEAPVWIPDAGATMCMECAAEFTIIRRRHHCRACGKIVCRSCSDGKAPLAYLGGKLARVCVTCQRIFGEHTHHMTMENTAEMVQNPLLAMLSDPRPSSIQSASSVPPPASSARTRRKSDNSGFGGISSMAHDDPRTTTSWASDAEVAQAVAAAMADVEEASSSPEVQRTSARRESKGGINKNRKKSVHNPSLLQAASGIMQTEKSQLSGYLTKQGEIVRSWKRRWFVLRNLCIYYYKAPEDVVALGMIPVPSYQVAPVDRADGVDREFAFKIFHNGMRTYYLAADSSEDMERWMQHIEQAVRGDMDHDA* # ORIGINAL: g10544.t1 original gene structure, not modified by PASA NODE_862_length_16577_cov_53.8081 AUGUSTUS gene 4097 5461 . - . ID=g10544;Name=g10544.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS mRNA 4097 5461 . - . ID=g10544.t1;Parent=g10544;Name=g10544.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS exon 4097 5461 . - . ID=g10544.t1.exon1;Parent=g10544.t1 NODE_862_length_16577_cov_53.8081 AUGUSTUS CDS 4097 5461 . - 0 ID=cds.g10544.t1;Parent=g10544.t1 #PROT g10544.t1 g10544 MHSTGYGAGEQSGHSDPHAEAAAREDTSRIAHLYFAASRLAETHHSGLRFKTVFVADAHERISVISDAQWTHIKSVAGHLLHVSPTMENADVMNSERIINLAISIFVVEEVATAWGSYNDPQMHPDVLQATFAAQYLGGTGVAVVVLPDATHGAPMAAPMMYGPPAQMHLYGQGRAPQNETGAVGNMHVSSHGYPLGGGYGVHQSRAVPVADDCDNPQRHAQPSPRAIASQPLSSGGAHCIFCESGDRPTGKLFKDLSRHMFRHFDAFEADGATGGHVLSVFHRVRYGDAQGLSDIVAFWDAYADYVARATGGGSGARVDTAASGGAITIDHIISTGTLLNSGSFSSIFQCKSAPKGQSRGDVVARVLSTIQYVGRESRIRAAKRLAVASRAPRLFRKFVCTSWLAALRKEEMRSEDAGLTEEFWEAANDTGSDTNVPAALVSARGQATLKQSD* # ORIGINAL: g2796.t1 original gene structure, not modified by PASA NODE_4526_length_1497_cov_32.3024_potentialcontaminant AUGUSTUS gene 278 1363 . - . ID=g2796;Name=g2796.t1 NODE_4526_length_1497_cov_32.3024_potentialcontaminant AUGUSTUS mRNA 278 1363 . - . ID=g2796.t1;Parent=g2796;Name=g2796.t1 NODE_4526_length_1497_cov_32.3024_potentialcontaminant AUGUSTUS exon 278 1363 . - . ID=g2796.t1.exon1;Parent=g2796.t1 NODE_4526_length_1497_cov_32.3024_potentialcontaminant AUGUSTUS CDS 278 1363 . - 0 ID=cds.g2796.t1;Parent=g2796.t1 #PROT g2796.t1 g2796 MREVMLRCQKLAGTGNPCAIPAEKARAWTKGSVLFVPSSDDLPFGSMVGVKVDDISFHGDVASVLVQRAAAHELLDNMVLDYDHEAALAERARRAPSSWGNIKADNSFSNFASLQDAQARFNSIPTTTMYAVFTVQDLSLYNIALRKLSMQSTGGRLISFNMVIDVIGSFRGYSRQSASSPLKFDDKIHTNRNRLGYFGFKTAQNVDVYLSLASEHYTEMIANLDDEFIARVLGFNTNFRYTMTLNFDSTKAAGLQWTFVAGEVQAPLFNVFNEVKVGRNSDTVNQLIMQSYTEFVATIGVGPADNPTYELMGPVFAVVPKLILRGPKASPYTVDATIATRAYFRQNAAMKALSSNVDDFGF # ORIGINAL: g2885.t1 original gene structure, not modified by PASA NODE_7672_length_417_cov_88.5965_potentialcontaminant AUGUSTUS gene 2 417 . + . ID=g2885;Name=g2885.t1 NODE_7672_length_417_cov_88.5965_potentialcontaminant AUGUSTUS mRNA 2 417 . + . ID=g2885.t1;Parent=g2885;Name=g2885.t1 NODE_7672_length_417_cov_88.5965_potentialcontaminant AUGUSTUS exon 2 417 . + . ID=g2885.t1.exon1;Parent=g2885.t1 NODE_7672_length_417_cov_88.5965_potentialcontaminant AUGUSTUS CDS 2 417 . + 2 ID=cds.g2885.t1;Parent=g2885.t1 #PROT g2885.t1 g2885 TPRALLAVDLCRLNSTGGVVPVYPGNYIRTSFDLARPLSYKSVGGFKTVIVNITSTATVTGVVSFDGFTFTGASYSSRTGRAINLKANAVFRNCYFVDFPVAALEITVTGVYLSVVNCNFTMTSNLIPNFGPISSETV # PASA_UPDATE: g3146.t1, single gene model update, valid-1, status:[pasa:asmbl_5650,status:12], valid-1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . gene 215 2724 . - . ID=g3146;Name=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . mRNA 215 2724 . - . ID=g3146.t1;Parent=g3146;Name=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . five_prime_UTR 2667 2724 . - . ID=g3146.t1.utr5p1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 2541 2724 . - . ID=g3146.t1.exon1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 2541 2666 . - 0 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 2164 2286 . - . ID=g3146.t1.exon2;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 2164 2286 . - 0 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 1727 1896 . - . ID=g3146.t1.exon3;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 1727 1896 . - 0 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 1334 1462 . - . ID=g3146.t1.exon4;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 1334 1462 . - 1 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 927 1156 . - . ID=g3146.t1.exon5;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 927 1156 . - 1 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 471 603 . - . ID=g3146.t1.exon6;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 471 603 . - 2 ID=cds.g3146.t1;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . exon 215 253 . - . ID=g3146.t1.exon7;Parent=g3146.t1 NODE_3160_length_4149_cov_39.1846_potentialcontaminant . CDS 215 253 . - 1 ID=cds.g3146.t1;Parent=g3146.t1;3_prime_partial=true #PROT g3146.t1 g3146 MLSRVLPSLRQTGVTSGRILSPSAAFATAPFKGQTKLFIDNTFVDAVSGKTFETINPSTGDVITRVAEADAADVEIAVKAASKAFYEGPWGTTISARERGTYIHRLANLMEKHREELATLETLDNGKPFRDSFNIDVPLSIECLRYYAGWSDKVHGKTIPIPGPYLSYTRHEPVGVVGQIIPWNFPLLMMCWKLGPALATGNTIILKPAEQTPLSALRMAELIAEAGFPKGVVNILPGFGPTAGATLARHMDVDKVAFTGSTEIGHRIMEMAAQTNMKRVTLELGGKSPVIVLPDADMDYTIETTHFGLFFNQGQC # ORIGINAL: g6965.t1 original gene structure, not modified by PASA NODE_2533_length_5986_cov_38.8711 AUGUSTUS gene 464 2122 . + . ID=g6965;Name=g6965.t1 NODE_2533_length_5986_cov_38.8711 AUGUSTUS mRNA 464 2122 . + . ID=g6965.t1;Parent=g6965;Name=g6965.t1 NODE_2533_length_5986_cov_38.8711 AUGUSTUS exon 464 2122 . + . ID=g6965.t1.exon1;Parent=g6965.t1 NODE_2533_length_5986_cov_38.8711 AUGUSTUS CDS 464 2122 . + 0 ID=cds.g6965.t1;Parent=g6965.t1 #PROT g6965.t1 g6965 MDISALGECARSVCAPLWSGSPFLSTVREWVALTAREQDARTDIASNTTVLTDIVDLILRVIERDESVNTEMSGDASRDVVLECLRLLRNACAGASASQLHVASGCRGVHCIEAINNAALPAIANCGRYSSAFLSIPASQRVLCAKLALQVACNASTGCVAASEAFWQRLVPSDAFMSALATDSVEVRAVAVHFVHQCVLDADPSVSRVRIGQLCRDGPWRRVLVWLAKALADDSHGADAKVFGIFRSIISFDLLPFAHASLSGDPNCVDGLTRDAYVLMHFVATLSETQTVSIVSDAAPDAGDRILALPVTTVNWLSEIACACSSRANDPSFWTPSPPSLPHASSVLSSPFAPVEGSNNSISELHREWLAALLECLGAATGAMHDGHLGGSTDVSHERLLDAVADMLVFACEINPIQKPAKDEVEAARRKTLPMVGHKTRLVRIVANLCHGSRRNQDSFRERGAFYPLLSLCNLDDENPYLKEWSVLAVRNLLADNETNQALVKGLEPHTQTPVDPAALDAAGLEVEFDGEGKLKIRKKRDVDGDGASSSH* # PASA_UPDATE: g6966.t1, single gene model update, valid-1, status:[pasa:asmbl_4515,status:12], valid-1 NODE_2533_length_5986_cov_38.8711 . gene 2390 5620 . - . ID=g6966;Name=g6966.t1 NODE_2533_length_5986_cov_38.8711 . mRNA 2390 5620 . - . ID=g6966.t1;Parent=g6966;Name=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 5205 5620 . - . ID=g6966.t1.exon1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 5205 5620 . - 0 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 4837 5035 . - . ID=g6966.t1.exon2;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 4837 5035 . - 1 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 4390 4499 . - . ID=g6966.t1.exon3;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 4390 4499 . - 0 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 4101 4173 . - . ID=g6966.t1.exon4;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 4101 4173 . - 1 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 3727 3887 . - . ID=g6966.t1.exon5;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 3727 3887 . - 0 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 3426 3540 . - . ID=g6966.t1.exon6;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 3426 3540 . - 1 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 3046 3162 . - . ID=g6966.t1.exon7;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 3046 3162 . - 0 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . exon 2390 2757 . - . ID=g6966.t1.exon8;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . CDS 2581 2757 . - 0 ID=cds.g6966.t1;Parent=g6966.t1 NODE_2533_length_5986_cov_38.8711 . three_prime_UTR 2390 2580 . - . ID=g6966.t1.utr3p1;Parent=g6966.t1 #PROT g6966.t1 g6966 MHPGQCHESGGAPTRGLQLNLVSSSESVASDTLVMANLGYFQLKGNPGVWTVAIRSGRSSKIFSLESAEAFGSSQSQRVGGSIVVVRDFVGSFLQLRAKRNPGMEKESLVVEGSDAEEDESPEPEKEAGESGLWSSIQNAFGGGSVAGTGDAKKGEKLETINVFSVASGHLYERFLRVMMLSVVRNTKNPVKFWLLKNYLSPTFKESIPIMAAHYGFEYELVTYKWPAWLNAQTNKIRIIWGYKILFLDVLFPLGVKKIIFVDSDQSVRADLKELIDMDLKGAPYAYTPFCEDRPEMDGFKFWKQGYWKNHLQGRPYHISALYVVDLQRFRQLAAGDRLRGQYQGLSMDPNSLANLDQDLPNNMIHQLPMHSLPQEWLWCETWCSNDIKPKAKTIDLCNNPLTKEPKLNAALRILPEWTGLDSEIRTLLTNSRNQQQQQQAVAAETKDGKSREEL* # ORIGINAL: g14301.t1 original gene structure, not modified by PASA NODE_1814_length_9114_cov_43.6563 AUGUSTUS gene 2466 4151 . - . ID=g14301;Name=g14301.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS mRNA 2466 4151 . - . ID=g14301.t1;Parent=g14301;Name=g14301.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS exon 3967 4151 . - . ID=g14301.t1.exon1;Parent=g14301.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS CDS 3967 4151 . - 0 ID=cds.g14301.t1;Parent=g14301.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS exon 2466 3840 . - . ID=g14301.t1.exon2;Parent=g14301.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS CDS 2466 3840 . - 1 ID=cds.g14301.t1;Parent=g14301.t1 #PROT g14301.t1 g14301 MAIEYVAVPGGVHTPIDGVTSKDDGCASARENVDEEATCSPTRLPVFRIFLLSGLVFAVQFGISLETAYVIPLFAELGITERFSSLLWAMGPIAGLIMQPVIGNASDRCTLRWGRRRPFILALALGAMLGLLFIPNGQWVGQRLGDTDDSHKGAIAICVLGVLLLDFCCDSAMGPLRAYLLDVLPVDQQDLGNSVIGIMAGLGASLGYVAGGVEWGVVGHMLGSQLRAAFTCGLVVAVLCSIATLFSAREKPLLARPRLSQTPSHTPADDTTPLLRDQSLSQPPSHSDTLEERGHVNAREIFAYLLHLPRPIVRICIVNFLGWVAFLSYVIFFTDFVGIELYGGDPTLPEGNEYRDAYDKGVRVGSLGLAAFSIGIVVTSIAVSRLLPRVGVRPLYCACYLCFCVGVGVISLTDSLAVVLAMCFVSGTLFSALFTMPFMCLSAFEAARGSDGRSNGLAVAVVSMMQFLGQVLVSVTMGNVIESVGDVTIAMYSASACSAVGAVATLFLVLGSDLHAYAN* # PASA_UPDATE: g14303.t1, single gene model update, valid-1, status:[pasa:asmbl_2697,status:12], valid-1 NODE_1814_length_9114_cov_43.6563 . gene 7079 8915 . - . ID=g14303;Name=g14303.t1 NODE_1814_length_9114_cov_43.6563 . mRNA 7079 8915 . - . ID=g14303.t1;Parent=g14303;Name=g14303.t1 NODE_1814_length_9114_cov_43.6563 . exon 8725 8915 . - . ID=g14303.t1.exon1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 8725 8915 . - 0 ID=cds.g14303.t1;Parent=g14303.t1;5_prime_partial=true NODE_1814_length_9114_cov_43.6563 . exon 8515 8576 . - . ID=g14303.t1.exon2;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 8515 8576 . - 1 ID=cds.g14303.t1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . exon 8239 8404 . - . ID=g14303.t1.exon3;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 8239 8404 . - 2 ID=cds.g14303.t1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . exon 7920 8029 . - . ID=g14303.t1.exon4;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 7920 8029 . - 1 ID=cds.g14303.t1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . exon 7635 7731 . - . ID=g14303.t1.exon5;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 7635 7731 . - 2 ID=cds.g14303.t1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . exon 7079 7354 . - . ID=g14303.t1.exon6;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . CDS 7195 7354 . - 1 ID=cds.g14303.t1;Parent=g14303.t1 NODE_1814_length_9114_cov_43.6563 . three_prime_UTR 7079 7194 . - . ID=g14303.t1.utr3p1;Parent=g14303.t1 #PROT g14303.t1 g14303 PELHELACIDVTSCAQGILAGINAALAVKGAPPLVLDRADGYLGVLVDDLITHGATEPYRMFTARAEYRFTMRADNADFRLTPKGIAVGCVSKERIDTFESKLSKYEAAKSMLKNNRCSPKEWTERLGTVVIGDGPGMRSGWDMLGFQTVTIDMLFGKFPDLSLLPRDILAGLAIDGKYAALIDQQERQVAEYRRDAGIRLPEDIDYTKMAFLPMEAREKLSRARPHTLGAASTIAGVTPTALMILLHHVKRGNYATMGQI* # PASA_UPDATE: g14300.t1, single gene model update, valid-1, status:[pasa:asmbl_2696,status:12], valid-1 NODE_1814_length_9114_cov_43.6563 . gene 4 827 . - . ID=g14300;Name=g14300.t1 NODE_1814_length_9114_cov_43.6563 . mRNA 4 827 . - . ID=g14300.t1;Parent=g14300;Name=g14300.t1 NODE_1814_length_9114_cov_43.6563 . five_prime_UTR 739 827 . - . ID=g14300.t1.utr5p1;Parent=g14300.t1 NODE_1814_length_9114_cov_43.6563 . exon 525 827 . - . ID=g14300.t1.exon1;Parent=g14300.t1 NODE_1814_length_9114_cov_43.6563 . CDS 525 738 . - 0 ID=cds.g14300.t1;Parent=g14300.t1 NODE_1814_length_9114_cov_43.6563 . exon 4 75 . - . ID=g14300.t1.exon2;Parent=g14300.t1 NODE_1814_length_9114_cov_43.6563 . CDS 4 75 . - 2 ID=cds.g14300.t1;Parent=g14300.t1;3_prime_partial=true #PROT g14300.t1 g14300 MWHYDRDAAPNWRRRAARIASALLFVFALATFMLMRYDGSKSHVADYVDQSDTVPLAGAQLAVVQQVDAQTVMASGTAALRSAPRPCQTETADIG # ORIGINAL: g14302.t1 original gene structure, not modified by PASA NODE_1814_length_9114_cov_43.6563 AUGUSTUS gene 4897 6959 . + . ID=g14302;Name=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS mRNA 4897 6959 . + . ID=g14302.t1;Parent=g14302;Name=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS exon 4897 5905 . + . ID=g14302.t1.exon1;Parent=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS CDS 4897 5905 . + 0 ID=cds.g14302.t1;Parent=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS exon 6035 6159 . + . ID=g14302.t1.exon2;Parent=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS CDS 6035 6159 . + 2 ID=cds.g14302.t1;Parent=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS exon 6411 6959 . + . ID=g14302.t1.exon3;Parent=g14302.t1 NODE_1814_length_9114_cov_43.6563 AUGUSTUS CDS 6411 6959 . + 0 ID=cds.g14302.t1;Parent=g14302.t1 #PROT g14302.t1 g14302 MSASDDAPSSRSSATFDALPTMSTTMPTKPASHTKSASHSESSDFPSGTPFDLDRDGTVAMLHSACDHLVRKMFDENRPPLLELEGGEAALTSALQTIRRPHLPREPSSLSAETLFEQMVEQITSTGRNPRHPGALCFMPTGGILQAMAPDIVARGLLLFSSYHACAPHLARMESDVILWMCEAVGFPRETSFGFVSTGGSQGNWAGLVCGREARIAADPSTDLRRCSVYASEEVHCSISKGMRLAGIPPANLRRIPVNARHAMCVDELRRAMEVDVADGFVPLAVVASAGCVVSGAIDDFKGIRAVADQFGCWVHVDGAYGGFFVLSKEGKELLEGIATADSVSLDAHKSLFLPPAVGLFLTRHVDIQRIAFGHERAAYLGPPAPFDFLSGSVDIAEISPEQTREPRGLRLWFPLVLFGADAFGSVLSEKLRLARYLASELRSFDMLEIVTEPYMSILTFKVVCHAGQPHARTLASTEKHAGAACSCATAESAESACRKNTTDLIAFVNAQKHVLLFPVTVSGVFAVRVCILSYATHKQSVDDLLADLRQGVKALGLTA* # ORIGINAL: g8446.t1 original gene structure, not modified by PASA NODE_1314_length_12191_cov_52.8073 AUGUSTUS gene 3941 5610 . - . ID=g8446;Name=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS mRNA 3941 5610 . - . ID=g8446.t1;Parent=g8446;Name=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 5416 5610 . - . ID=g8446.t1.exon1;Parent=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 5416 5610 . - 0 ID=cds.g8446.t1;Parent=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 4808 5273 . - . ID=g8446.t1.exon2;Parent=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 4808 5273 . - 0 ID=cds.g8446.t1;Parent=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 3941 4629 . - . ID=g8446.t1.exon3;Parent=g8446.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 3941 4629 . - 2 ID=cds.g8446.t1;Parent=g8446.t1 #PROT g8446.t1 g8446 MTQTRELAYVGAHETKSLEAFSPTLAAICKLAAQTTPGGIKMICTDNARADIQADVFHLIKMFFEACQPTAQREIFISDVSAAFYGFVEADVIAKRDRMRADGKTTAEITEFLGNRRKLLRCAQVRRRLLPPAVIVKNLNTLQNTYTCPGAVTLFKPVMQNVFANVKAVIEADFVAEPIDVPIWPWVNISETAIPCWRVFRGTSELESFHHFINSLDLGDSHAIAGHSFLRPLFRKDVATVMGTPAQIEALQPASGPVGAAAAMRALAGAANMNDAPYYCGIDVTTSTSSAARAFLTYSSACKLFGRPFCLESESAYGFDDASRLAAWAAKCDAAKLPRGIHLSKYDRLPLLATHCLDARALSSSGHNLTVEMILSGFFLTGGAAKDAYDIAERTGDYVPFWRPLESSGISEGKYLNVKELLNSYNFTTSLCMKSSRGCRSANTSRRRL* # ORIGINAL: g8447.t1 original gene structure, not modified by PASA NODE_1314_length_12191_cov_52.8073 AUGUSTUS gene 5706 7006 . - . ID=g8447;Name=g8447.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS mRNA 5706 7006 . - . ID=g8447.t1;Parent=g8447;Name=g8447.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 6429 7006 . - . ID=g8447.t1.exon1;Parent=g8447.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 6429 7006 . - 0 ID=cds.g8447.t1;Parent=g8447.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 5706 6255 . - . ID=g8447.t1.exon2;Parent=g8447.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 5706 6255 . - 1 ID=cds.g8447.t1;Parent=g8447.t1 #PROT g8447.t1 g8447 MASPKSGANRTPSPETGADTVASPETGANRTSSPETGANRTPSPETGADTVTSPETGANMTSSPETGANRTPSPETGTDTVTSPETGANRTTLSPKTGADTVASPETGANRTSSPETADRTASPTTDDEDGNADDNDSEDDDEFVAIHALYDPYLNDLFKFYFGDSQRFMRQNQQAQTGYHLPTAERSIPPSWNGYADGFRCERAFLGSSPRLFKYATYRCPGNCPLDKGPAPGTTSIPASAVRTSTTHYTALDPHIVEQLPPIVREIVPFVVTSKSIVHVSTVEGVVALKLHGVSFRAMTEASKQVITTLRADREILILEMYRQQQERSVDRRPVPMCRCLRIFHPFYLSLGRWDETCSGRRFHGKSHSFNAPS* # ORIGINAL: g8445.t1 original gene structure, not modified by PASA NODE_1314_length_12191_cov_52.8073 AUGUSTUS gene 329 1619 . - . ID=g8445;Name=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS mRNA 329 1619 . - . ID=g8445.t1;Parent=g8445;Name=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 1343 1619 . - . ID=g8445.t1.exon1;Parent=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 1343 1619 . - 0 ID=cds.g8445.t1;Parent=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 943 1157 . - . ID=g8445.t1.exon2;Parent=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 943 1157 . - 2 ID=cds.g8445.t1;Parent=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 329 607 . - . ID=g8445.t1.exon3;Parent=g8445.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 329 607 . - 0 ID=cds.g8445.t1;Parent=g8445.t1 #PROT g8445.t1 g8445 MTASGSSPAARRVCSIYLHFGVALQVLAAYATVPGAASASGGRVHADSDGTLTLTGGDSAHSIALNGNVSVAGTLQLQNVGSVQDVVKGLQRDVLESKSRRTVLYGLSGIDATKSVIAEMPWPGTDRGACYMATIRLMPNACGSIYTLFYTGFLTVGIGYTGTQVVQAVAFAPNSNPTQPKLDGINLMTNGISVSAYFVSNTGEQQQYFSPGENPSVQWLKLRLVVGGFTFNTEGCKKTEIGSLRVILDRLDGGVP* # ORIGINAL: g8448.t1 original gene structure, not modified by PASA NODE_1314_length_12191_cov_52.8073 AUGUSTUS gene 9802 12101 . - . ID=g8448;Name=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS mRNA 9802 12101 . - . ID=g8448.t1;Parent=g8448;Name=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 11934 12101 . - . ID=g8448.t1.exon1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 11934 12101 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 11692 11754 . - . ID=g8448.t1.exon2;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 11692 11754 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 11229 11360 . - . ID=g8448.t1.exon3;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 11229 11360 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 10790 10942 . - . ID=g8448.t1.exon4;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 10790 10942 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 10372 10488 . - . ID=g8448.t1.exon5;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 10372 10488 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 10116 10200 . - . ID=g8448.t1.exon6;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 10116 10200 . - 0 ID=cds.g8448.t1;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS exon 9802 10010 . - . ID=g8448.t1.exon7;Parent=g8448.t1 NODE_1314_length_12191_cov_52.8073 AUGUSTUS CDS 9802 10010 . - 2 ID=cds.g8448.t1;Parent=g8448.t1 #PROT g8448.t1 g8448 VLTTISAHCKLGLTATLVREDDKIQDLNFLIGPKLYEANWMDLQRAGHIARVSCAEVWCPMTPEFFRTYLESDQRRQMLLYAMNPNKFQACQYLIRHHEERGDKIIVFSDDLFALKHYAEKLDRYYICGSTTHEERKEILHKFRLEAGIRTIFISKVGDNSFDLPEANVLIQAIAEEYNAYFYSLVSTDTQEMLYSAKRQQFLVDQGYAFKVILRLPRIEEMPGLAFQTRREQIDLLATVVASKEEDLEEENVGNDGIEAPNSARGAVARRAGTMESLSGADKMVYMEYKTGARGGKGNVGISRRGRK* # PASA_UPDATE: g7997.t1, single gene model update, valid-1, status:[pasa:asmbl_6745,status:12], valid-1 NODE_3933_length_2494_cov_34.654 . gene 45 455 . + . ID=g7997;Name=g7997.t1 NODE_3933_length_2494_cov_34.654 . mRNA 45 455 . + . ID=g7997.t1;Parent=g7997;Name=g7997.t1 NODE_3933_length_2494_cov_34.654 . five_prime_UTR 45 45 . + . ID=g7997.t1.utr5p1;Parent=g7997.t1 NODE_3933_length_2494_cov_34.654 . exon 45 455 . + . ID=g7997.t1.exon1;Parent=g7997.t1 NODE_3933_length_2494_cov_34.654 . CDS 46 204 . + 0 ID=cds.g7997.t1;Parent=g7997.t1;5_prime_partial=true NODE_3933_length_2494_cov_34.654 . three_prime_UTR 205 455 . + . ID=g7997.t1.utr3p1;Parent=g7997.t1 #PROT g7997.t1 g7997 IETGTWYANRCDYLDPALAWTGVKDSGRGCTLSVLGFDQLTRPKSFHIRKVE* # ORIGINAL: g2315.t1 original gene structure, not modified by PASA NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS gene 541 1308 . - . ID=g2315;Name=g2315.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS mRNA 541 1308 . - . ID=g2315.t1;Parent=g2315;Name=g2315.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS exon 994 1308 . - . ID=g2315.t1.exon1;Parent=g2315.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS CDS 994 1308 . - 0 ID=cds.g2315.t1;Parent=g2315.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS exon 541 774 . - . ID=g2315.t1.exon2;Parent=g2315.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS CDS 541 774 . - 0 ID=cds.g2315.t1;Parent=g2315.t1 #PROT g2315.t1 g2315 MRLISVYIALCIAFTLLVIAVSLSNAADARRVLSISADTEGSASLRLNGVNKTLVLDSGVNGTVVVNGVDLLDKLKQLQAHVDWQQAAINRQQIAINTLLEDAKTQFKAMSRIAAASQQVSGWQRLRFDTSEYDTIGGIYQSNIAAYFLPVAGWYSVRSGIFSLTATTAADSTSGRWYSNAR* # ORIGINAL: g2316.t1 original gene structure, not modified by PASA NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS gene 8472 9239 . + . ID=g2316;Name=g2316.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS mRNA 8472 9239 . + . ID=g2316.t1;Parent=g2316;Name=g2316.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS exon 8472 8786 . + . ID=g2316.t1.exon1;Parent=g2316.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS CDS 8472 8786 . + 0 ID=cds.g2316.t1;Parent=g2316.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS exon 9006 9239 . + . ID=g2316.t1.exon2;Parent=g2316.t1 NODE_1681_length_9779_cov_29.9213_potentialcontaminant AUGUSTUS CDS 9006 9239 . + 0 ID=cds.g2316.t1;Parent=g2316.t1 #PROT g2316.t1 g2316 MRLISVYIALCIAFTLLVIAVSLSNAADARRVLSISADTEGSASLRLNGVNKTLVLDSGVNGTVVVNGVDLLDKLKQLQAHVDWQQAAINRQQIAINTLLEDAKTQFKAMSRIAAASQQVSGWQRLRFDTSEYDTIGGIYQSNIAAYFLPVAGWYSVRSGIFSLTATTAADSTSGRWYSNAR* # ORIGINAL: g8374.t1 original gene structure, not modified by PASA NODE_2805_length_5081_cov_41.6007 AUGUSTUS gene 4408 4603 . - . ID=g8374;Name=g8374.t1 NODE_2805_length_5081_cov_41.6007 AUGUSTUS mRNA 4408 4603 . - . ID=g8374.t1;Parent=g8374;Name=g8374.t1 NODE_2805_length_5081_cov_41.6007 AUGUSTUS exon 4408 4603 . - . ID=g8374.t1.exon1;Parent=g8374.t1 NODE_2805_length_5081_cov_41.6007 AUGUSTUS CDS 4408 4603 . - 1 ID=cds.g8374.t1;Parent=g8374.t1 #PROT g8374.t1 g8374 AHTVRMQLDRATTDGAALATQLQRTMDDRLRLARELRERESALEQAWMDGERLREGLREVIDSF* # PASA_UPDATE: g8373.t1, single gene model update, valid-1, status:[pasa:asmbl_5055,status:12], valid-1 NODE_2805_length_5081_cov_41.6007 . gene 297 3955 . + . ID=g8373;Name=g8373.t1 NODE_2805_length_5081_cov_41.6007 . mRNA 297 3955 . + . ID=g8373.t1;Parent=g8373;Name=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 297 485 . + . ID=g8373.t1.exon1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 297 485 . + 0 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 785 1240 . + . ID=g8373.t1.exon2;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 785 1240 . + 0 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 1425 1886 . + . ID=g8373.t1.exon3;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 1425 1886 . + 0 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 2119 2804 . + . ID=g8373.t1.exon4;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 2119 2804 . + 0 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 3013 3265 . + . ID=g8373.t1.exon5;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 3013 3265 . + 1 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . exon 3398 3955 . + . ID=g8373.t1.exon6;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . CDS 3398 3634 . + 0 ID=cds.g8373.t1;Parent=g8373.t1 NODE_2805_length_5081_cov_41.6007 . three_prime_UTR 3635 3955 . + . ID=g8373.t1.utr3p1;Parent=g8373.t1 #PROT g8373.t1 g8373 MYCHLPWHNAVEALQAELDRLNALIQQADKYNQESKAEVAVTKRVSSKAKEDMSQLEHQKVKQDLLIDDMSERAKALGEKRTLYEAQYATQAKETKAILDTLAEASAEIEAISYEKKQIMQQWRSSLVGMQRRDDALRAIHAALSKEREKLVEQAAEISGYRTSIRGEQAKNENLTVLQNRIENEITSLNRQLETIATQREETMGQYSLLAKALQDAESELAGVSKEHGGLARHIDSLNKETEMVSREIQQIEIEIMNQLGAKASAEKLSDRTQKSAAKMRAAMNEEENRIQELQNDLSKMRVEAQNVMARNKSLKSELQRSIKALQEKNELVGNYELEIRQKNQEIEKKQKSVDRLNKQLDTLSSKAADENSGLAEVAIAKLQREIDTTAAENSQLQQFWLRDQHELVTLSKDAEDRAKAAHELATRQVILERKRLRVEQEIFQQHTEMQEYDRSIRALQSDLVRLNRVIQKNVNTRDVLSENMADLESDFGSKLKDAEMEAIRLEESSEGIREERHRMEESLIEAERQIMLWEQKLQLAKETRAAIDPNVGAQEIQMMRSEIHRMTLRYDQLQRQQEKMIQEMEKSIERRESIASRGRTVVNSKAVTQAALGKKLADVDRKLKTVAKDLRGCDREIAGLTEAQNTTGARVEEVGRKCKALLGQCDMLEGKFARDNEIKQKNLEAILFYNRQAKRYKDALEGRYAVSGDDAKVATESARQENRIQSLNAVLDSVIREHPHLQRQLGEISATLNTRLASS* # ORIGINAL: g10845.t1 original gene structure, not modified by PASA NODE_3199_length_4036_cov_41.4355 AUGUSTUS gene 2296 3606 . - . ID=g10845;Name=g10845.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS mRNA 2296 3606 . - . ID=g10845.t1;Parent=g10845;Name=g10845.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS exon 2296 3606 . - . ID=g10845.t1.exon1;Parent=g10845.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS CDS 2296 3606 . - 0 ID=cds.g10845.t1;Parent=g10845.t1 #PROT g10845.t1 g10845 MPELKIYGGALGAIGASPASALKKRKGSKKTKRDWRKNVDIVDVEEHIHETSREMRTGGPAHLKTDAELFFTDKAATTTAPAKAKVPVKSAKQRAREKVLQVDAILAPNPKVKPVSSRVAPASKKTAVAADDDADEEGENSADRLQRLRKEVRAQLAARVGKNANASGAPAADAWTVVENTSELATNDYLESARIVPVKEPVTLKSRPKMKVPAVEPTHPGASYNPTYEDHQAALAAAVAKEEKKLKERLAHEAKLAEALRNNPGPAMSQEDEVRLQILGKIPMDGVEGSGEEEDANGSESRSQKLQPERKTNAQRRKEKRQREEEEADSERKSKKRRENEIFRVRTIRKELIVQDAERDERAKQRVVKKEETVLTRPGRLGSRKFTDAPVEVQLTDDLAGSLRKLRPEGSILSDRYKSMQKRNILEPRGPVKWVA* # ORIGINAL: g10844.t1 original gene structure, not modified by PASA NODE_3199_length_4036_cov_41.4355 AUGUSTUS gene 941 1294 . + . ID=g10844;Name=g10844.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS mRNA 941 1294 . + . ID=g10844.t1;Parent=g10844;Name=g10844.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS exon 941 1127 . + . ID=g10844.t1.exon1;Parent=g10844.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS CDS 941 1127 . + 0 ID=cds.g10844.t1;Parent=g10844.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS exon 1233 1294 . + . ID=g10844.t1.exon2;Parent=g10844.t1 NODE_3199_length_4036_cov_41.4355 AUGUSTUS CDS 1233 1294 . + 2 ID=cds.g10844.t1;Parent=g10844.t1 #PROT g10844.t1 g10844 MVEEDKTKRKVDNDVANDYAGEIKARLFETSSKSGANIEELFQAVAEDYAKRTGADKTPQVAERGRNLKDDAASAEEKKGCC* # ORIGINAL: g11140.t1 original gene structure, not modified by PASA NODE_817_length_17363_cov_39.5072 AUGUSTUS gene 12452 17254 . - . ID=g11140;Name=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS mRNA 12452 17254 . - . ID=g11140.t1;Parent=g11140;Name=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 17093 17254 . - . ID=g11140.t1.exon1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 17093 17254 . - 0 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 16650 16747 . - . ID=g11140.t1.exon2;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 16650 16747 . - 0 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 16236 16378 . - . ID=g11140.t1.exon3;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 16236 16378 . - 1 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 15858 15951 . - . ID=g11140.t1.exon4;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 15858 15951 . - 2 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 15352 15441 . - . ID=g11140.t1.exon5;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 15352 15441 . - 1 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 14691 14995 . - . ID=g11140.t1.exon6;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 14691 14995 . - 1 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 14334 14463 . - . ID=g11140.t1.exon7;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 14334 14463 . - 2 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 13550 13689 . - . ID=g11140.t1.exon8;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 13550 13689 . - 1 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 13229 13282 . - . ID=g11140.t1.exon9;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 13229 13282 . - 2 ID=cds.g11140.t1;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 12452 12867 . - . ID=g11140.t1.exon10;Parent=g11140.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 12452 12867 . - 2 ID=cds.g11140.t1;Parent=g11140.t1 #PROT g11140.t1 g11140 MGGHTEVLDVLIDGEADIEALDKRGRTALMVAIALGHEEAVSLLTQQDCNFSAVDEHGRTALHYAAIHGNENVTSLLIEREAQIDARDGKERTPLHLSAIHGNDAAMGKLLVAGADPLAVDCDGLTPLHWCCYKDHVDCVNTIAPSFGAFSTRKGINPFSPLHAAAAGDAADCIEALFEADVLTPTAIGALDDYGRTCVHFAALSGSCDSVGMLFSRIDPSFSKGKGSDSDSPSEAEESDADGDDSGEDDGEDSPSDTKADKKKAAVEIIRVLVNVRDTRGQTALALAALNDHEDVIDVLISAGADPSIADEDGYMPVDHARASGHDDCAELLEAASGNGALPPSLPPSTSIPRPRDVNLIPFRNDAASVATNISKLSLKALHGSDSEDDGASENLSVDSQSILQDIDKGTRSEVLGEITLAIASGVIPPLKQDVFGDDGEAFTPLVNVVSPEVATSSLASSQPSLSPTCNAQDTANEIAADGSGAATNAEIKQSTDTEGDAAVADAHGDNNGLGARIAVVATAALAAAAGVTVMALRRASRG* # PASA_UPDATE: g11139.t1, single gene model update, valid-1, status:[pasa:asmbl_9521,status:3], valid-1 NODE_817_length_17363_cov_39.5072 . gene 10381 11477 . - . ID=g11139;Name=g11139.t1 NODE_817_length_17363_cov_39.5072 . mRNA 10381 11477 . - . ID=g11139.t1;Parent=g11139;Name=g11139.t1 NODE_817_length_17363_cov_39.5072 . five_prime_UTR 11350 11477 . - . ID=g11139.t1.utr5p1;Parent=g11139.t1 NODE_817_length_17363_cov_39.5072 . exon 11204 11477 . - . ID=g11139.t1.exon1;Parent=g11139.t1 NODE_817_length_17363_cov_39.5072 . CDS 11204 11349 . - 0 ID=cds.g11139.t1;Parent=g11139.t1 NODE_817_length_17363_cov_39.5072 . exon 10381 11111 . - . ID=g11139.t1.exon2;Parent=g11139.t1 NODE_817_length_17363_cov_39.5072 . CDS 10574 11111 . - 1 ID=cds.g11139.t1;Parent=g11139.t1 NODE_817_length_17363_cov_39.5072 . three_prime_UTR 10381 10573 . - . ID=g11139.t1.utr3p1;Parent=g11139.t1 #PROT g11139.t1 g11139 MAGDEEHPPKQRPLLSRLWPFGGKTVDTTTTTPRVLETIKSYIIKPPPRRSSSLETSTEAIKSATYRAVQAVRDSTSQLPSTSSIVDGAKGAWRALPSPVKATRDAADAVREGISSTSRQITSTIGNVGASEGMQRAKSLVVDAAPRIASGAAGAVFGGARRAVVGLQYRVLAVVVLGVFAYGVGSALPHALAEYRLKARDMEQHAEREKEAHRDRMNNHAGSDHRP* # ORIGINAL: g11137.t1 original gene structure, not modified by PASA NODE_817_length_17363_cov_39.5072 AUGUSTUS gene 60 2313 . - . ID=g11137;Name=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS mRNA 60 2313 . - . ID=g11137.t1;Parent=g11137;Name=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 2235 2313 . - . ID=g11137.t1.exon1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 2235 2313 . - 0 ID=cds.g11137.t1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 1966 2091 . - . ID=g11137.t1.exon2;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 1966 2091 . - 2 ID=cds.g11137.t1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 1494 1631 . - . ID=g11137.t1.exon3;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 1494 1631 . - 2 ID=cds.g11137.t1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 1107 1199 . - . ID=g11137.t1.exon4;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 1107 1199 . - 2 ID=cds.g11137.t1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 580 654 . - . ID=g11137.t1.exon5;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 580 654 . - 2 ID=cds.g11137.t1;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 60 233 . - . ID=g11137.t1.exon6;Parent=g11137.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 60 233 . - 2 ID=cds.g11137.t1;Parent=g11137.t1 #PROT g11137.t1 g11137 MPAEVLDSSHSVADGIDDIIRTVTSDVNAERVDLVTAIAPSLSLILTGDGSTELKTKAALLVAELCKTAPHRILMGDGGVIAAVSAQLASDAARLGGPYAIQLARAGGNAQIDSDSNRRLFVDAGGCAAIVKLLETAVGACIGPQGALPDGDWMLLRVTCGLALNASAHTESAYRNPQLATAHFSADFAQKELVSAGAMSLLLRAFDQTEDEMVQQLAVRALGSLFEA # ORIGINAL: g11138.t1 original gene structure, not modified by PASA NODE_817_length_17363_cov_39.5072 AUGUSTUS gene 3229 9683 . - . ID=g11138;Name=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS mRNA 3229 9683 . - . ID=g11138.t1;Parent=g11138;Name=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 9512 9683 . - . ID=g11138.t1.exon1;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 9512 9683 . - 0 ID=cds.g11138.t1;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 7396 9166 . - . ID=g11138.t1.exon2;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 7396 9166 . - 2 ID=cds.g11138.t1;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 6765 7165 . - . ID=g11138.t1.exon3;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 6765 7165 . - 1 ID=cds.g11138.t1;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 3488 6368 . - . ID=g11138.t1.exon4;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 3488 6368 . - 2 ID=cds.g11138.t1;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS exon 3229 3322 . - . ID=g11138.t1.exon5;Parent=g11138.t1 NODE_817_length_17363_cov_39.5072 AUGUSTUS CDS 3229 3322 . - 1 ID=cds.g11138.t1;Parent=g11138.t1 #PROT g11138.t1 g11138 MNRAQSGRHVHYPTVSKSRFLARRKRLIFVTVALAVCLISFYGFMGRQNPGANNSVGASRDKVASQQPNLPAAPEPEENFRRFRNHDIEGLQRPNPDRKGGLIRLDTDAEEEEEEDGNVVVSNLDVLAPADNRDDPLEGNWKPPGTNWESSDSNTGNDDGDGEEVAEDDGEPRPEDDPANVDDADAAEAERGRGRDGGPQELFGGGQLFGNAELGLNSDENGNGDNGESEGEAEGLGGLGGPARDHSGGVVGSGLRPPKIVLDMQEEPMNDFEDDSNNEDNGDGTEHSSDDNGEESDPDLREEVGGDESDGDGESSNTNSEDEGASLSELENGNIGIVGGDNAAKPLAGERSPPNEVGGSNNREAPDDDGGSNNEEAPEDDGGSNNGEVPEDDGGSNNGEAPGEDIYVDEQSKEATTEEDPAGVRNRGETNDNKGEPGNGANDGTDNSLRDAARDHVTKEDGTGDRDTTTVGDEAADTKKLAEPENKAPTPDGGVKAEGSLNSRGESNESIDNTRKPAIDVMSGKPTVDNVGPAPVVIGSSSAQPPSSKGVSAPTVNTEIVAVVNRTYPYTCSIRYLAHIDFVREYSDRRYALTDYSVAAAKALPRCGAADSLYKLGTWVVPCKRTCGRATLGDCQMGELEWVGLTCKLQDRVNFPVPFLQSINKRVVVFIGDSTLRGVSDRLLDVLGLPPAPKMQMTSHNVTMRPTRHVPSDIIGPSFLSVYYRHWKPDTAASNGDPVAWGEMLSHYFDNEFPAALSPFLPKSRAAGTASARGSELRSLANNFVLIVGGLLMGPEGALAVRKWLCSHTNTALEGVRVQTLLIGSRPSSAYSLDQLQENAYGAQGVATCSRMFSAVTAPAADDQTEQKVPIVPAADKSVSDSRDDALAPPSIDGPVKPVDRPVVAPVKPPVTADRPAVVPDKPPATVDRPAVVGAPAKPGKGVPASPLDDTVAMDGNAVATAGAKQGGINVPGADVPRTKSADPAVANDVPATDNKKTPANAAHAPATHGTFAGEKEKVLALGDRVKDIPNTTVLGDNSKPPNNAVPDKGAGLQIPPLRGADKTADNAGKLLADDETQPGVQAHNLIDANNRGGTRDDSAGSDSQAAAAIDVADNENNNEVEAEEQNAGSDEAVAANGVPGARDAANGDAEGANGNVEDANGDAEGVSGDAESANGDAEGVSGDSEGASGDTKDGANGDAEEGANEGTEEGANGNAEGASGDTKDGANGGAKDGTNGNAESPSGDTKEGANGGAEEGANEGTKDGANDGTEEGANGNAEGASDDTKDGANGGAKDGANGGAKDGANGNAEGASGDTKDGANEGTEDGANGNAEGASDDTKDGANGSTEEGANDGTEEGANGNAKGANGDSKDGANGDAKEGANGDAEEGANGDADEGANGDDENEDAEDGANGNADGANRDAEEGVNGTAEEGANGNAEEGANGNAEEGANGDPEEGANGDDENGDAEDGANGNAAEGANGDAADGVNGDAADGVNGDAEEGANGDGEGDGEQEIPGGDEGEQNAAIRGVAADSGAKQVLKAAARDTVVESGQMRVGRRLASVPDGLSRAGGEDSDSKGAVSLDGMDDSASQVKSVAGTGEDFPQRGMSWLFLSQEACEDIFRSFVEDSHEQGAPGAVAEVASDDSSDNVILEGRGAQDDDSNTPEDDENSDGVDIQRAGVAGGVAGGGAGGDGPEDETTDMCALNPTIGHLDYFDVMSMTGPMWWMARKDDGCTCHFYRTFPTNKPGRRVLGKVNDNIANVVFNYLSFRPT* # ORIGINAL: g13628.t1 original gene structure, not modified by PASA NODE_1198_length_13182_cov_45.513 AUGUSTUS gene 4744 7030 . - . ID=g13628;Name=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS mRNA 4744 7030 . - . ID=g13628.t1;Parent=g13628;Name=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 6707 7030 . - . ID=g13628.t1.exon1;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 6707 7030 . - 0 ID=cds.g13628.t1;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 5993 6505 . - . ID=g13628.t1.exon2;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 5993 6505 . - 0 ID=cds.g13628.t1;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 5582 5771 . - . ID=g13628.t1.exon3;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 5582 5771 . - 0 ID=cds.g13628.t1;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 4744 5396 . - . ID=g13628.t1.exon4;Parent=g13628.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 4744 5396 . - 2 ID=cds.g13628.t1;Parent=g13628.t1 #PROT g13628.t1 g13628 MDTPTLLQAALAIIVSTALFALVQRISSWSHMSAPPIVHAHLDADVDCARTSAEPICTNNPYGIPGPSKSDDTLGNFPEIRSAGGLHQYLTSLHKEYGDIAAFWFGVLPVVSVGSGRLLRHTLPLTHRPPALFDLFRPLIGDKSIQYANGADWRERRRRLDPAFTHSSVERMRHIFEEVVAERIAVWEQKYAVATDGHCKQLGASTPGKGHILRVPIHAESFELALRGIIITAFGRSSFGGDSEIEQLRAAYNTAWTEMEMRLGEGLPPEGSPRHIAFEAALCTLLEKVDAAVLSVDAASTPLAVPCGEGALLAALAGGGDCDARQVQNDAVTYFVGGFHTTGNFLTWVLYYLALHPDVQSTVASEIDTVFGSHDPSVAGGIKSDQMHMEQLKYLDCVLQETLRHRVLAPWAARTVPEDGDGITIGHYSLPPGAVVIQALGVAMHDGEQFDSPLEFRPERFSRQMWPIATYAADDQMNSPTVRPIHERACPSPLAHSPFGIGKRACPGQKYTMSESKTFLCTLLRRYCISLADPLQLVVPVYGLVVSPAEEIYLNFTPR* # PASA_UPDATE: g13630.t1, single gene model update, valid-1, status:[pasa:asmbl_743,status:12], valid-1 NODE_1198_length_13182_cov_45.513 . gene 11537 13067 . - . ID=g13630;Name=g13630.t1 NODE_1198_length_13182_cov_45.513 . mRNA 11537 13067 . - . ID=g13630.t1;Parent=g13630;Name=g13630.t1 NODE_1198_length_13182_cov_45.513 . exon 12998 13067 . - . ID=g13630.t1.exon1;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . CDS 12998 13067 . - 0 ID=cds.g13630.t1;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . exon 12423 12541 . - . ID=g13630.t1.exon2;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . CDS 12423 12541 . - 2 ID=cds.g13630.t1;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . exon 11537 12259 . - . ID=g13630.t1.exon3;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . CDS 11780 12259 . - 0 ID=cds.g13630.t1;Parent=g13630.t1 NODE_1198_length_13182_cov_45.513 . three_prime_UTR 11537 11779 . - . ID=g13630.t1.utr3p1;Parent=g13630.t1 #PROT g13630.t1 g13630 MLRLNSSDQKEAAIHRLFAGSLAGMTAVSFTYPLDLIRTQLAFQVSEKRYAGIVDAFRKIVAEGGVRALYRGFWPTIYGMIPYAGLSFFTFETSKAFLVANFADYAITKTLPPGQAPTPADLSVPANFLCGALAGGTAQTVAYPLDVVRRRMQLEGVASGIPKYRNTIQAIYRIVRDEGIPRGLYRGLSINYLRTVPQVAVSFTIYEFLKHTFKINRPVLLS* # ORIGINAL: g13627.t1 original gene structure, not modified by PASA NODE_1198_length_13182_cov_45.513 AUGUSTUS gene 3205 4273 . + . ID=g13627;Name=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS mRNA 3205 4273 . + . ID=g13627.t1;Parent=g13627;Name=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 3205 3297 . + . ID=g13627.t1.exon1;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 3205 3297 . + 0 ID=cds.g13627.t1;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 3417 3551 . + . ID=g13627.t1.exon2;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 3417 3551 . + 0 ID=cds.g13627.t1;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 3693 3776 . + . ID=g13627.t1.exon3;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 3693 3776 . + 0 ID=cds.g13627.t1;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 4139 4273 . + . ID=g13627.t1.exon4;Parent=g13627.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 4139 4273 . + 0 ID=cds.g13627.t1;Parent=g13627.t1 #PROT g13627.t1 g13627 MSDAGCPVRGRHLTCEPCDEMVTGGFDPDRGIILCENKVQGQVQVNNTIMHELVHAYDHCRAHVDWNDCRHHACSEIRAAALSGDCDFWTEVSRGNIGFKGQVMKCARRRAILSVSMNPNCGPDKAKRAVDEVFDTCFKDSSPFHHVP* # PASA_UPDATE: g13626.t1, single gene model update, valid-1, status:[pasa:asmbl_742,status:3], valid-1 NODE_1198_length_13182_cov_45.513 . gene 974 2221 . + . ID=g13626;Name=g13626.t1 NODE_1198_length_13182_cov_45.513 . mRNA 974 2221 . + . ID=g13626.t1;Parent=g13626;Name=g13626.t1 NODE_1198_length_13182_cov_45.513 . five_prime_UTR 974 1033 . + . ID=g13626.t1.utr5p1;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . exon 974 1250 . + . ID=g13626.t1.exon1;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . CDS 1034 1250 . + 0 ID=cds.g13626.t1;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . exon 1424 1493 . + . ID=g13626.t1.exon2;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . CDS 1424 1493 . + 2 ID=cds.g13626.t1;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . exon 1824 2221 . + . ID=g13626.t1.exon3;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . CDS 1824 2055 . + 1 ID=cds.g13626.t1;Parent=g13626.t1 NODE_1198_length_13182_cov_45.513 . three_prime_UTR 2056 2221 . + . ID=g13626.t1.utr3p1;Parent=g13626.t1 #PROT g13626.t1 g13626 MGKSDKKDKEDKKKTPSKAEKTETPKKSPKVDKEEDAEPETNYDDAIKRVSAIANPIASKKLNKKVLKTVKKAAKAKSLRRGVKEVVKALRKGEKGLVVIAGDISPIDVITHVPILCEEAAIPYVYVPSKEELGTAGATKRPTSCVLVKTGADYKDSFDECVTEVKSLPVPR* # ORIGINAL: g13629.t1 original gene structure, not modified by PASA NODE_1198_length_13182_cov_45.513 AUGUSTUS gene 7738 10818 . + . ID=g13629;Name=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS mRNA 7738 10818 . + . ID=g13629.t1;Parent=g13629;Name=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 7738 7799 . + . ID=g13629.t1.exon1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 7738 7799 . + 0 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 7961 8312 . + . ID=g13629.t1.exon2;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 7961 8312 . + 1 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 8486 8626 . + . ID=g13629.t1.exon3;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 8486 8626 . + 0 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 8946 9155 . + . ID=g13629.t1.exon4;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 8946 9155 . + 0 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 9432 9648 . + . ID=g13629.t1.exon5;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 9432 9648 . + 0 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 9848 9950 . + . ID=g13629.t1.exon6;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 9848 9950 . + 2 ID=cds.g13629.t1;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 10050 10818 . + . ID=g13629.t1.exon7;Parent=g13629.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 10050 10818 . + 1 ID=cds.g13629.t1;Parent=g13629.t1 #PROT g13629.t1 g13629 MSQPSSQLDSSSNLRPEDFFPTSQLASLFDFLEPDDIPRSLRTISFSIDGGSGLVRTHSSANVNGPLHNNAYSSVQYDGLSTVGTWSGKGASGGWSDLNLSDIQANWPGAYGFSVEFSATSPSPTWDYNDSHGLFANRNLGFPVVFRTSRPPRSRASVFVRALMRFVAPQYAKESVTECISHIQAEQKSGGVPVDRVGSFLRCDSSEATYTTDPRTGHHSIVLPLGSASSASHTEVFSFACFSSCLGERGRRHIQLVFLLEVNGEVVGSRAVDVRVCANPTRDLKGILDTTGDRSRRRQPKDTTKDTPPHGRQRDAHSGAMSNAIARVPVGVVSETHTISAAVSADGPDDDNEVFTIQVRGRRNYDIVSRIVMGLNALDGGSSVGEQQLAIADAPITTVLKQPSGVPAENRVASRVKRTIADSEGDVHQSPAAKRRRGRNVTANNATTVVKSENVEHPDEHPATRLHVPTRSGDGDTEVEDNDGTSDEDVGPHTPIKTGLGAPEPRQRPAPSEARAVQQPVPCGVSRQPSIVRRPVRDCLDRNGLGRHVPGLERAGLLDWQRLQAARDMDLERAGVDDPTDRRKLSNLVTLATGQLQFIQYTMTRTISTPVVRPPES* # ORIGINAL: g13625.t1 original gene structure, not modified by PASA NODE_1198_length_13182_cov_45.513 AUGUSTUS gene 249 543 . - . ID=g13625;Name=g13625.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS mRNA 249 543 . - . ID=g13625.t1;Parent=g13625;Name=g13625.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS exon 249 543 . - . ID=g13625.t1.exon1;Parent=g13625.t1 NODE_1198_length_13182_cov_45.513 AUGUSTUS CDS 249 543 . - 0 ID=cds.g13625.t1;Parent=g13625.t1 #PROT g13625.t1 g13625 MEDERAAIHQQIADVAESILKVEDKLEALELRLKKIKEALDKTAQPPTLETQPADEEKKHLRKELRREEKWLHNEKEHLLKEKEQLRTEKIILRQQAG # ORIGINAL: g2052.t1 original gene structure, not modified by PASA NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS gene 186 1841 . + . ID=g2052;Name=g2052.t1 NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS mRNA 186 1841 . + . ID=g2052.t1;Parent=g2052;Name=g2052.t1 NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS exon 186 1118 . + . ID=g2052.t1.exon1;Parent=g2052.t1 NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS CDS 186 1118 . + 0 ID=cds.g2052.t1;Parent=g2052.t1 NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS exon 1554 1841 . + . ID=g2052.t1.exon2;Parent=g2052.t1 NODE_2582_length_5793_cov_46.2329_potentialcontaminant AUGUSTUS CDS 1554 1841 . + 0 ID=cds.g2052.t1;Parent=g2052.t1 #PROT g2052.t1 g2052 MSDVVAVGFNLLAPETVVHHIVPYLSNVDVSSLAKVNRALHAHLRQKRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVLDGCNRGEANPQLGAFAGAFSVSVNSEPVIPDLSPLHDVRELVLTHCQEFDATPFINLHRLVMKGGWIVNTFALSKVSVIELTGVDLDSMEFTCVKRVSLLSCSFPKHMIDVSGLRNARFVTLVNLEHLVDVSALANAIEVTIEKCDMVSRASLLMLGRVKKLYYRPSRSCSSRFSGQPNAVPDAVPIEFANVHTLEMADSPVVDVTPLGNIHTLSLSADIHDDFLEKLGSACKVDNVEALGRVHFLDLSDCPTVSDVSALGHVHTLILLNCRCISDVSRLGTVFHLDISSCFGIMDLSPVATVAVLGVGDLNASSSVLSGVRRVL* # PASA_UPDATE: g6432.t1, single gene model update, valid-1, status:[pasa:asmbl_6883,status:3], valid-1 NODE_4030_length_2315_cov_34.4844 . gene 523 1724 . + . ID=g6432;Name=g6432.t1 NODE_4030_length_2315_cov_34.4844 . mRNA 523 1724 . + . ID=g6432.t1;Parent=g6432;Name=g6432.t1 NODE_4030_length_2315_cov_34.4844 . five_prime_UTR 523 537 . + . ID=g6432.t1.utr5p1;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . exon 523 654 . + . ID=g6432.t1.exon1;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . CDS 538 654 . + 0 ID=cds.g6432.t1;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . exon 978 1214 . + . ID=g6432.t1.exon2;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . CDS 978 1214 . + 0 ID=cds.g6432.t1;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . exon 1462 1724 . + . ID=g6432.t1.exon3;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . CDS 1462 1614 . + 0 ID=cds.g6432.t1;Parent=g6432.t1 NODE_4030_length_2315_cov_34.4844 . three_prime_UTR 1615 1724 . + . ID=g6432.t1.utr3p1;Parent=g6432.t1 #PROT g6432.t1 g6432 MKLGLAVADCIARFGRMSELLYVIADVPFPFSNRDLALEVDAEDDLDHNSFNLVFSTVDSCPDAEVPACPEGLVRIECKGGAQFTFNTAGKTSFKLLWELDPKIAAVPAWLINFITMKVVKYGLYKFQSVALGIAGSEYDKRIDANRELYDGIRERLEKILPLESLAK* # PASA_UPDATE: g210.t1, single gene model update, valid-1, status:[pasa:asmbl_8221,status:12], valid-1 NODE_566_length_21113_cov_40.9988 . gene 4757 6078 . - . ID=g210;Name=g210.t1 NODE_566_length_21113_cov_40.9988 . mRNA 4757 6078 . - . ID=g210.t1;Parent=g210;Name=g210.t1 NODE_566_length_21113_cov_40.9988 . five_prime_UTR 6069 6078 . - . ID=g210.t1.utr5p1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . exon 5929 6078 . - . ID=g210.t1.exon1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . CDS 5929 6068 . - 0 ID=cds.g210.t1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . exon 5654 5753 . - . ID=g210.t1.exon2;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . CDS 5654 5753 . - 1 ID=cds.g210.t1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . exon 5323 5488 . - . ID=g210.t1.exon3;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . CDS 5323 5488 . - 0 ID=cds.g210.t1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . exon 4757 5231 . - . ID=g210.t1.exon4;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . CDS 4786 5231 . - 2 ID=cds.g210.t1;Parent=g210.t1 NODE_566_length_21113_cov_40.9988 . three_prime_UTR 4757 4785 . - . ID=g210.t1.utr3p1;Parent=g210.t1 #PROT g210.t1 g210 MNSRAYLGTLVLKEPKMSNVRFFFDFISPYAYVGWHSIKQVTTGHSRVLEPIPVLFAGLLNNYGQLGPAEVAPKKAFIFKDASRKATRFGLPPLRVPPTHPFNPLLSLRLASLPSMEPHTRALIIDSLFTAAWSEGRDISDAEVVRLTITEALACHWRPAHRRHIGGTASSSEHSLSPPAEPAEIDTMVSNRGPAEAAKSMIALAGTDAVKDLLRRQTNAAIADGVFGVPTYIVDGELFWGSDTVIDVDNFMSGRDPVDHGYFERVALNVAPSAERRRSLRGV* # ORIGINAL: g211.t1 original gene structure, not modified by PASA NODE_566_length_21113_cov_40.9988 AUGUSTUS gene 6393 9189 . + . ID=g211;Name=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS mRNA 6393 9189 . + . ID=g211.t1;Parent=g211;Name=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 6393 7072 . + . ID=g211.t1.exon1;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 6393 7072 . + 0 ID=cds.g211.t1;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 7284 7767 . + . ID=g211.t1.exon2;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 7284 7767 . + 1 ID=cds.g211.t1;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 8079 8716 . + . ID=g211.t1.exon3;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 8079 8716 . + 0 ID=cds.g211.t1;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 9057 9189 . + . ID=g211.t1.exon4;Parent=g211.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 9057 9189 . + 1 ID=cds.g211.t1;Parent=g211.t1 #PROT g211.t1 g211 MSTPQQTHRRRRKKHKRVDADDTKQSGVASIGLEISNVLFGLNRNLSQSLQPDASVSSTNGNLLAAEEYVGPTGDATGIDAILGSIAPTDSSSERTTSVSSDDTVASCVDSGASDLSLRSPEGKVVCGDEGTPAHATHPSADDVQKQFKERAHGGYFHPSEWDLSVDHADQMRGVWPNVYWRAVLHDELRTHSRFIALPPVDRVVIESQVSLRFIRQDSVLWDKAHSGLLTTRRLSAVLGFREPKSVRRLSLSRRFINHSDALEACAHLRLPLHYAWTVGADDTVSNARVPSSPIDAPATPASELQPLRRVLHVGNVRSTADYNINKANCSPASSVGVACCPDSVSGHPFGNEGMRLASCTADGAGALYRGPFRGAADVRMAWGRAQEASSILSLLDAHPTSRVIEAGLFVLEPASTDRIDNALALPPLGASPDGILVHDMDDQHTMDEIVSQLLVHTTGAPSLPSSTGARSVRMEVVEVKNVCPFVDAPSASEEKQKQQSAQESKKRKKKKTKTGGDGRGISGMTIDELMGSPGSPVSRGAPPSARGRAVFARKDLGPHEHVAPQFVPQLQLEMLVTGAEVANLVSCSATKGTNIFRVCRDDAYIASMLRYISRFYTAFVCTGIDPPDDFFFDDKASVHRPVD* # ORIGINAL: g209.t1 original gene structure, not modified by PASA NODE_566_length_21113_cov_40.9988 AUGUSTUS gene 241 4344 . - . ID=g209;Name=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS mRNA 241 4344 . - . ID=g209.t1;Parent=g209;Name=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 4139 4344 . - . ID=g209.t1.exon1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 4139 4344 . - 0 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 2266 3956 . - . ID=g209.t1.exon2;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 2266 3956 . - 1 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 1835 1938 . - . ID=g209.t1.exon3;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 1835 1938 . - 2 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 1553 1652 . - . ID=g209.t1.exon4;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 1553 1652 . - 0 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 1149 1233 . - . ID=g209.t1.exon5;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 1149 1233 . - 2 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 741 849 . - . ID=g209.t1.exon6;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 741 849 . - 1 ID=cds.g209.t1;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 241 399 . - . ID=g209.t1.exon7;Parent=g209.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 241 399 . - 0 ID=cds.g209.t1;Parent=g209.t1 #PROT g209.t1 g209 MASWLGNRLGNVTSGAIGNINLSSITGQLSSYAKDMLIEGTEEVSDYAAEASFAKDRLHDMEAANDALRSELERSQTNAEDMAQRLTASEMQVESISREYRRLLVEKEQECSAFKSKCADLTEQLRTRITESRKLAANMSSGDLQSLVAIGGENGHGSALGRSSIGTPLEAPAVVTLIDENGDAGDGGASFGEALSSQLEINRLSTELRHALDDASHWRNVADESQSRVRFLEKQLQDQRSNGGGDASSAHENAEAVVSRYEEMLGSLRRQLDAAVQKHQQEMEDYRDVHARMVSDARRVDLAEIARLNEAVEDQALTIESLELAVQQLHAEKKGARDAHTETERELDIVRAEVNSLRDAFSDSESEKARAETERQLSEAISKIETMRGELDGARSQVDGLKTSLEDALGKLEESASSEKPAFAISDAVPTTVTTATVGTATDNDGGNHLTPLASISAAPVATLEAPRPSTVECAVQTDLIEEKETDTAKPTAAAEDVRDILLSTAPLPRGHPDGALRAHYDAEVAGLREALVRGEQQLERLRAHLLEVEQSRTLEAVDLESTNKELVRRVRELETAYEAERSSAMRARLLAEGAVSDRDAMAAGLKETQMALVQKDTSVQNLQLVLEQFAREQDQQIEMATLRLRKENATLMGDKEALSKRISELESTLARRSTEAAEVASLRVAMEEKETQLASIRAELGKAQRELKSSYERLHTTLTSTDQNNLDKRFITSLILSYFRSEKKDDVLRVIANVLGLSEEERAQVGLVRRRTWGNIPYLSSITSKLSTLGAVAALGVSGTAQTHHSDAAAKALADGS # ORIGINAL: g213.t1 original gene structure, not modified by PASA NODE_566_length_21113_cov_40.9988 AUGUSTUS gene 16758 20864 . + . ID=g213;Name=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS mRNA 16758 20864 . + . ID=g213.t1;Parent=g213;Name=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 16758 17052 . + . ID=g213.t1.exon1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 16758 17052 . + 0 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 17422 17531 . + . ID=g213.t1.exon2;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 17422 17531 . + 2 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 17912 18370 . + . ID=g213.t1.exon3;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 17912 18370 . + 0 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 18760 18852 . + . ID=g213.t1.exon4;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 18760 18852 . + 0 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 19150 19300 . + . ID=g213.t1.exon5;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 19150 19300 . + 0 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 19506 19592 . + . ID=g213.t1.exon6;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 19506 19592 . + 2 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 19902 20047 . + . ID=g213.t1.exon7;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 19902 20047 . + 2 ID=cds.g213.t1;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS exon 20766 20864 . + . ID=g213.t1.exon8;Parent=g213.t1 NODE_566_length_21113_cov_40.9988 AUGUSTUS CDS 20766 20864 . + 0 ID=cds.g213.t1;Parent=g213.t1 #PROT g213.t1 g213 MRAELLLFGVIVSVATLIVSTDALMHGQHRIPSSFPTLRQRREATGDASPKTVPYRRPRDTHRCGTPHRAEPEHREETLNPPAKAAEKSFLEHLRRRRELNGFPGQALTAAAGTVGSWDVNPTNGVLTDAFPTDSLTVDAWLKLPAITLKNDQQDLNVVLASFSLNPTLSFYLAVNASGVIIKCPKWASEDLGEWAVLYDHSTAEFPWTDNGEDLAYPKGWSHVVGRCEPDKVKPNATAASLMVNGVVFHGTSQSNVANVVMTPKNGGPTGSVVGIKTAMGFDVSVDEVLHYSFIGVDPTEYFLVTNFDFESTDANPTKIYDKCANGYSNRIPRATTLVPSDIPLDIYYRQDDLEMALTYCGVTPCDEPEIMMSYASNPLLRGNSSIRIEFVGFSTAAGDASTFRYPSTSTTNTAAQLATLNQAFSGSGLVFNLVNETVVADDAIRRVSILTDCEDSRFIGNGDCDVQCQNAATNNDGA* # PASA_UPDATE: g212.t1, single gene model update, valid-1, status:[pasa:asmbl_8222,status:12], valid-1 NODE_566_length_21113_cov_40.9988 . gene 10070 15011 . - . ID=g212;Name=g212.t1 NODE_566_length_21113_cov_40.9988 . mRNA 10070 15011 . - . ID=g212.t1;Parent=g212;Name=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 14484 15011 . - . ID=g212.t1.exon1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 14484 15011 . - 0 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 13398 13920 . - . ID=g212.t1.exon2;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 13398 13920 . - 0 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 11964 12979 . - . ID=g212.t1.exon3;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 11964 12979 . - 2 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 11679 11788 . - . ID=g212.t1.exon4;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 11679 11788 . - 0 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 11168 11225 . - . ID=g212.t1.exon5;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 11168 11225 . - 1 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 10739 10855 . - . ID=g212.t1.exon6;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 10739 10855 . - 0 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . exon 10070 10462 . - . ID=g212.t1.exon7;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . CDS 10073 10462 . - 0 ID=cds.g212.t1;Parent=g212.t1 NODE_566_length_21113_cov_40.9988 . three_prime_UTR 10070 10072 . - . ID=g212.t1.utr3p1;Parent=g212.t1 #PROT g212.t1 g212 MADSRSSLADAVSSNNISLDMELDEFTSKREILSAGDAAQDDEDGARTPMGDSDEESLEASILGDHTVADCGSASRDDASRLDENVEIPSDKNDVNRAGDELISNDKSETWEASRAHTHSGMHTAVVFEAPRPSTIGDGTPMVMLSSTTLADCAMSRPPGKGLNASYDMLECIENDQPTTHAPAVVPAPERRRSSVLGITFPIVLEDGTVCHSPLSYAILVIGSYFRKEGYRIAWLVFCAVVIPTSVCIVVMGCIPIDFDYNSDDYDRIATYVWIVNPVTWTWWSYINVILFLGCLDANVPWRPFKSYAPILASVYALEVIAGSILWSNGDAFRLMGIIPIMISLVGTIVGLRLCSSRIIAYHPVLLSPHAPHGPAPSNYSTPLEGSRAPSTVSGLQKADDNHPDATNPPNYSGASGVDSTTNASSRASLSAVDGRNSHISSNRSSDAPSRKSRAAQSMHSGVLTAGDATPTPTTSRRLRSSREVPPGREPDGSDGHPQLGVAESGADASLPSHSALSSSASGKPSLTATVPHVTMHAGIVTVCDLSTAGNPHHGESANHYVVTTAEEGLVGVHGRHVVPAGGSNIDARGTVMSNNLSDILPQDPFVTYRVMLLQYTKCVVTFFFFLFVLSLFIIGMTKVSAGAQKALVIAVGIVQFIFKKTLLGLSDCFPIEMAMLMGGLWVEHLGDVFVVFAYPRTTDSSGTFVIFWLTQLAGNIAYLLFLTDSWIKFRVWIKSFLKNVFTGKGCAADPDAMPSDEHNPNDRGHSNIKSGYRRRQTRFFIWKVMSQMSGLAFFLCMTPVLRYGINDEHYPFASNSFNPIKLDYAPDSPLSESQYSAAMYFALANLGSVVVSLLVGIAIVQTAYPTLFQEILSIYRYLLVSPDLYGYVVAIILANSLVVISIFQRPMRIWYY* # PASA_UPDATE: g13669.t1, single gene model update, valid-1, status:[pasa:asmbl_875,status:3], valid-1 NODE_1229_length_12885_cov_43.9335 . gene 7220 8928 . - . ID=g13669;Name=g13669.t1 NODE_1229_length_12885_cov_43.9335 . mRNA 7220 8928 . - . ID=g13669.t1;Parent=g13669;Name=g13669.t1 NODE_1229_length_12885_cov_43.9335 . five_prime_UTR 8771 8928 . - . ID=g13669.t1.utr5p1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . exon 8629 8928 . - . ID=g13669.t1.exon1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . CDS 8629 8770 . - 0 ID=cds.g13669.t1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . exon 8301 8539 . - . ID=g13669.t1.exon2;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . CDS 8301 8539 . - 2 ID=cds.g13669.t1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . exon 8065 8144 . - . ID=g13669.t1.exon3;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . CDS 8065 8144 . - 0 ID=cds.g13669.t1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . exon 7811 7938 . - . ID=g13669.t1.exon4;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . CDS 7811 7938 . - 1 ID=cds.g13669.t1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . exon 7220 7473 . - . ID=g13669.t1.exon5;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . CDS 7241 7473 . - 2 ID=cds.g13669.t1;Parent=g13669.t1 NODE_1229_length_12885_cov_43.9335 . three_prime_UTR 7220 7240 . - . ID=g13669.t1.utr3p1;Parent=g13669.t1 #PROT g13669.t1 g13669 MTRFRSLWPMHPPMHWCIPHVAEPGPLWNAASWVILKMVGGSSRLFMNNFADLRVINKEVLMKAIDERPPGVPLLTVCNHMSVLDDPMLWGMLPLSYFRPGKVRWTIAAEDICFMRKIYALIFGLGQVFPVRRGAGVVQWPVTDFAVDMLNKGQWVHIFPEGKINPLKNVYRMKWGVGEMIAQSRVPPIVLPFWHEGMEDVMPDDNSPRIPRPFKKVTVLVGEPLRFDALVQHHRNERSSEETLRSAITDAVQHSLWALKAEMANIHAPSRSQ* # ORIGINAL: g13668.t1 original gene structure, not modified by PASA NODE_1229_length_12885_cov_43.9335 AUGUSTUS gene 4588 6807 . + . ID=g13668;Name=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS mRNA 4588 6807 . + . ID=g13668.t1;Parent=g13668;Name=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 4588 4700 . + . ID=g13668.t1.exon1;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 4588 4700 . + 0 ID=cds.g13668.t1;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 4846 5145 . + . ID=g13668.t1.exon2;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 4846 5145 . + 1 ID=cds.g13668.t1;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 5280 5428 . + . ID=g13668.t1.exon3;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 5280 5428 . + 1 ID=cds.g13668.t1;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 5553 6131 . + . ID=g13668.t1.exon4;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 5553 6131 . + 2 ID=cds.g13668.t1;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 6260 6807 . + . ID=g13668.t1.exon5;Parent=g13668.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 6260 6807 . + 2 ID=cds.g13668.t1;Parent=g13668.t1 #PROT g13668.t1 g13668 MADAKPQAKPHGQSVLEALDGAETSWYHIKTVIIAGMGFFCDAYDLFSISLITKTIGRVYYPDIAYFSHTDCLEAGYYGNSTVCGSKYSKIINEGVSPADARYYVPGAMPPNIDSAIKGVALCGTLTGQLIFGYLGDRYGRKKVFGLTLWLMIAFALMSGLSFGSTPDGVVGTLCVARFFLGVGVGGDYPLSATLMSEYSSKSNRGRFVAAVFAMQGTGILFAAIVSIVVSSIFMGHNASADYIWRIVLMFGAVPTAATMYARLGMPETSRFTMFVQGDAAKAAKDMGQVLGREVDATETVQRRRDFTWRQFLRKFGVQLFGCASTWFLLDIAFYSQNLFQSDVFTAIGWLPPAYTMDVTTEAFRIARAQALIALCSTIPGYWMTVATIEKMGRFKIQVMGFVMMTLFMAILAGDYTSLKSNHVPTFVALYALTFFFANWGPNSTTFVIPAELFPSKYRSTAHGISAAWGKAGAIIGTFGFGTMKDNIGLQKTIGILAAVNFAGLLCTYFVPETKNKTLEELGGDIDYAIPTDAEAVEMADGINATKIDVGPASAAPSTPSP* # PASA_UPDATE: g13671.t1, single gene model update, valid-1, status:[pasa:asmbl_876,status:3], valid-1 NODE_1229_length_12885_cov_43.9335 . gene 10814 12048 . - . ID=g13671;Name=g13671.t1 NODE_1229_length_12885_cov_43.9335 . mRNA 10814 12048 . - . ID=g13671.t1;Parent=g13671;Name=g13671.t1 NODE_1229_length_12885_cov_43.9335 . five_prime_UTR 12018 12048 . - . ID=g13671.t1.utr5p1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . exon 11856 12048 . - . ID=g13671.t1.exon1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . CDS 11856 12017 . - 0 ID=cds.g13671.t1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . exon 11517 11677 . - . ID=g13671.t1.exon2;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . CDS 11517 11677 . - 0 ID=cds.g13671.t1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . exon 11207 11294 . - . ID=g13671.t1.exon3;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . CDS 11207 11294 . - 1 ID=cds.g13671.t1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . exon 10814 11099 . - . ID=g13671.t1.exon4;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . CDS 10875 11099 . - 0 ID=cds.g13671.t1;Parent=g13671.t1 NODE_1229_length_12885_cov_43.9335 . three_prime_UTR 10814 10874 . - . ID=g13671.t1.utr3p1;Parent=g13671.t1 #PROT g13671.t1 g13671 MSSKGKKSGAKTAGAAAEPPQGASQAEPVTEEPLRIDLYDAAGIKNGLDDTIRAYVIEDLGYNEDHRYTDLKLALCGIASLFSAVALVYNFFVPFPDCKPVLATCAIGYFLITGFVTVLSMFYEKNTIIVAREPGTQDVLEVESRLPRFDENYSVTLHYRRGGASQGRATTQTVRSVGTFIRCDGQVAEDAVRKAVGKLFKTAKGLKEKSG* # PASA_UPDATE: g13670.t1, single gene model update, valid-1, status:[pasa:asmbl_873,status:12], valid-1 NODE_1229_length_12885_cov_43.9335 . gene 9188 10530 . + . ID=g13670;Name=g13670.t1 NODE_1229_length_12885_cov_43.9335 . mRNA 9188 10530 . + . ID=g13670.t1;Parent=g13670;Name=g13670.t1 NODE_1229_length_12885_cov_43.9335 . five_prime_UTR 9188 9231 . + . ID=g13670.t1.utr5p1;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . exon 9188 9355 . + . ID=g13670.t1.exon1;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . CDS 9232 9355 . + 0 ID=cds.g13670.t1;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . exon 9629 9869 . + . ID=g13670.t1.exon2;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . CDS 9629 9869 . + 2 ID=cds.g13670.t1;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . exon 10068 10530 . + . ID=g13670.t1.exon3;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . CDS 10068 10341 . + 1 ID=cds.g13670.t1;Parent=g13670.t1 NODE_1229_length_12885_cov_43.9335 . three_prime_UTR 10342 10530 . + . ID=g13670.t1.utr3p1;Parent=g13670.t1 #PROT g13670.t1 g13670 MSAALDRTPFYGGRVPVEIKRMVQRLKEIEKDRDAFRKALQVAVEVLEGYEVSEGRIEALHGGSLNHDNTGTIITGLHTLLKLAIRLPKISLKAEQLRDDLKELDIPAEFATDIASIVQGPRRDAIERSLQSHRVQLPSIVDLKWRVDVAISTSTLSRALKPSVVMQMSLSDGSIKTFEVPTDKFHELRYNVAYVLKEMEGLEKKSILKIQD* # ORIGINAL: g13667.t1 original gene structure, not modified by PASA NODE_1229_length_12885_cov_43.9335 AUGUSTUS gene 112 2496 . - . ID=g13667;Name=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS mRNA 112 2496 . - . ID=g13667.t1;Parent=g13667;Name=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 2481 2496 . - . ID=g13667.t1.exon1;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 2481 2496 . - 0 ID=cds.g13667.t1;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 986 2295 . - . ID=g13667.t1.exon2;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 986 2295 . - 2 ID=cds.g13667.t1;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 767 823 . - . ID=g13667.t1.exon3;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 767 823 . - 0 ID=cds.g13667.t1;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 552 598 . - . ID=g13667.t1.exon4;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 552 598 . - 0 ID=cds.g13667.t1;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS exon 112 364 . - . ID=g13667.t1.exon5;Parent=g13667.t1 NODE_1229_length_12885_cov_43.9335 AUGUSTUS CDS 112 364 . - 1 ID=cds.g13667.t1;Parent=g13667.t1 #PROT g13667.t1 g13667 MSKRPGAAAMPTPGGMKQKSLLSFFRSPTLGDKPSIKAAPGTTDAGETIDGTAPMNIDSASKVDMSSPVSPLMSPIISTERKADVHVTKKVVSTPVVRRPPSPPPTLTSENSVERKRPNDSPTLQSPANAMQASVPTSASPSSSKCKRTKDDDGETERPTKKVRAIDPVADDDGSEEAVPRRRIRKRVMYSDSEDSDAGAVAPPAKVARSRGAASQGPAAQKKRRGGRLSDFDDSGDEYNPTSDAGAADAGNGDESEDDGSEGVPSEGSDNEEEDTLRGRARKGGRGGNKPKPAGKKGKNQSPVVGESLVVEHTEKQLVTAVPAAASIDLSRFLASPPSSRAQPADGDALSRMMSPPLSAASKLKSPTPLGSSSAAAAKKAASPSAMAERGDERYPWLASVRDAQGRKEGDAEYDPTTLFVPKSAWDKFTPFEKQYWTIKKDHWSTIVFFRKGKFYELYEKDALIGHREFDLKLTDRVNMCMAGVPEATFTMWASKFIGIGYKVARVDEAETALSKAMREKQTSSKAEKIIRRDLTAVLTAGTLMGDFVVSDSAEHIMAIK # PASA_UPDATE: g154.t1, single gene model update, valid-1, status:[pasa:asmbl_840,status:12], valid-1 NODE_1218_length_12932_cov_40.773 . gene 11759 12674 . - . ID=g154;Name=g154.t1 NODE_1218_length_12932_cov_40.773 . mRNA 11759 12674 . - . ID=g154.t1;Parent=g154;Name=g154.t1 NODE_1218_length_12932_cov_40.773 . exon 12537 12674 . - . ID=g154.t1.exon1;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . CDS 12537 12674 . - 0 ID=cds.g154.t1;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . exon 12317 12362 . - . ID=g154.t1.exon2;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . CDS 12317 12362 . - 0 ID=cds.g154.t1;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . exon 11759 12086 . - . ID=g154.t1.exon3;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . CDS 11914 12086 . - 2 ID=cds.g154.t1;Parent=g154.t1 NODE_1218_length_12932_cov_40.773 . three_prime_UTR 11759 11913 . - . ID=g154.t1.utr3p1;Parent=g154.t1 #PROT g154.t1 g154 MNCAWAAGGFSQGGASSLFAGLTHEESLAGIIALSCYLPLRQRFPAAIAEANKKTPIFMAHGEADATVMYKWGEHSYEHLKKAGLNVSFLPIPGMGHSASDSEIAAIKRFVDEKLPAQ* # PASA_UPDATE: g151.t1, single gene model update, valid-1, status:[pasa:asmbl_841,status:12], valid-1 NODE_1218_length_12932_cov_40.773 . gene 3269 5156 . + . ID=g151;Name=g151.t1 NODE_1218_length_12932_cov_40.773 . mRNA 3269 5156 . + . ID=g151.t1;Parent=g151;Name=g151.t1 NODE_1218_length_12932_cov_40.773 . five_prime_UTR 3269 3389 . + . ID=g151.t1.utr5p1;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . five_prime_UTR 3660 3661 . + . ID=g151.t1.utr5p2;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . exon 3269 3389 . + . ID=g151.t1.exon1;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . exon 3660 3705 . + . ID=g151.t1.exon2;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . CDS 3662 3705 . + 0 ID=cds.g151.t1;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . exon 3853 4081 . + . ID=g151.t1.exon3;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . CDS 3853 4081 . + 1 ID=cds.g151.t1;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . exon 4332 4900 . + . ID=g151.t1.exon4;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . CDS 4332 4900 . + 0 ID=cds.g151.t1;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . exon 5132 5156 . + . ID=g151.t1.exon5;Parent=g151.t1 NODE_1218_length_12932_cov_40.773 . CDS 5132 5156 . + 1 ID=cds.g151.t1;Parent=g151.t1 #PROT g151.t1 g151 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRQHNRPTYTPTILIQNFYQNPHNIPYLPDGRAGADVPEEEVQRQYEDLYADIFVELESKYGEIEEMNICDNLGDHLIGNVYVKFSSEEVAERAAKDLNNRWYGGKAIVCELSPVTDFQEACCRQYEKSNCDRGGFCNFMHMKPISYDLYRELYGSRPPPSSRVKGLNAPADFGAKGTGGNGGGGGGGGGGGRGGYGGRGSHGGHGGDRGGGRDFRGGDRGDRRGDYGRPDDRGDRGDRERRRRSRSRSRSPRRR* # ORIGINAL: g150.t1 original gene structure, not modified by PASA NODE_1218_length_12932_cov_40.773 AUGUSTUS gene 133 2819 . - . ID=g150;Name=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS mRNA 133 2819 . - . ID=g150.t1;Parent=g150;Name=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 2734 2819 . - . ID=g150.t1.exon1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 2734 2819 . - 0 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 2439 2515 . - . ID=g150.t1.exon2;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 2439 2515 . - 1 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 2182 2303 . - . ID=g150.t1.exon3;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 2182 2303 . - 2 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 1593 1984 . - . ID=g150.t1.exon4;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 1593 1984 . - 0 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 1322 1424 . - . ID=g150.t1.exon5;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 1322 1424 . - 1 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 942 1075 . - . ID=g150.t1.exon6;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 942 1075 . - 0 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 450 645 . - . ID=g150.t1.exon7;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 450 645 . - 1 ID=cds.g150.t1;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 133 225 . - . ID=g150.t1.exon8;Parent=g150.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 133 225 . - 0 ID=cds.g150.t1;Parent=g150.t1 #PROT g150.t1 g150 MSGQPDERQVSMDAIVRILNRYMSSVLTGSGDADDEQEEYVSPNEHSDDSGSDSADEIDPDDGDDSDHSEEGGSVSGGIGEMKRKARGNNVSRLEAGPIVQDIMLRSGAYTEPRARSPHTSSAHTAANESPSEDDPQHGIGHRVKRRRRASSAAIDTSIDSDAGGSAAGVEQSGRSSASREAEADTPQPSKLAKGNMFDMLRFRERSATARGGAFSLGQKARLTHRMVPNTPSAVVDSYHYKAFCGRYSSDGKIFMTACQDHNVRLYDASANFRLQRTIAARRLGWSIVDTDYSPDQQYIVYSGWAPAVYLCNVAGGSEIHQTLKLQSAATNGFCPFTVRFSHDTRYIVAGCNDGCIYLYDLEANKRTLQINAHSDDVNAVAFADDTSQLIYSGGDDALIK # PASA_UPDATE: g152.t1, single gene model update, valid-1, status:[pasa:asmbl_842,status:3], valid-1 NODE_1218_length_12932_cov_40.773 . gene 6128 10698 . + . ID=g152;Name=g152.t1 NODE_1218_length_12932_cov_40.773 . mRNA 6128 10698 . + . ID=g152.t1;Parent=g152;Name=g152.t1 NODE_1218_length_12932_cov_40.773 . five_prime_UTR 6128 6334 . + . ID=g152.t1.utr5p1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 6128 6444 . + . ID=g152.t1.exon1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 6335 6444 . + 0 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 6669 7302 . + . ID=g152.t1.exon2;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 6669 7302 . + 1 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 7620 7753 . + . ID=g152.t1.exon3;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 7620 7753 . + 0 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 7954 8269 . + . ID=g152.t1.exon4;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 7954 8269 . + 1 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 8503 8675 . + . ID=g152.t1.exon5;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 8503 8675 . + 0 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 8950 9448 . + . ID=g152.t1.exon6;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 8950 9448 . + 1 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 9680 9691 . + . ID=g152.t1.exon7;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 9680 9691 . + 0 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 9924 10210 . + . ID=g152.t1.exon8;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 9924 10210 . + 0 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . exon 10410 10698 . + . ID=g152.t1.exon9;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . CDS 10410 10578 . + 1 ID=cds.g152.t1;Parent=g152.t1 NODE_1218_length_12932_cov_40.773 . three_prime_UTR 10579 10698 . + . ID=g152.t1.utr3p1;Parent=g152.t1 #PROT g152.t1 g152 MASPAPAPLPATPRAIPRASQPTSVAELAKMFPSVERGTVESLLSTYGGDMSSAVEQLAYMTAPSPMHSPASLRATHSTTVHVGGENGSSRTAAQRGAEASSAAEALSPGTARARMNFDPSVDLAEPEVQWYMQDDKDRWLPFSRHDTYVLEMAFRAKPSPPPPPPSASAQHHAGATPPLPQRETAAGEGDSYIAVRGGLYDGNITRRTCAPVYWTGKSVSIMRGTWFQASLTGDWRPLDETMAEQLEIAFRCRPWEATQRFNIADGSHFAMFYGSDDVWLFSDDVTSRIGRSIGEAVGKIERVGGTRLKRGYRPRDAVHRCDVADALVGADFANARAAAPGSIPLSDECRHVRHVVLVVHGIGQKLDAYCNIVDDVNALRQAANAVAPVHFAEEWGKSRVEFLPVQWRRGLTLPGDGKGEGEVAGVEDITLDGIRTLRNILNGTMLDILYYMSQRHLRWIVDRLVRELNDIYGKFVARNPSFLLNGGTVSIIGHSLGSVIVFDILCAQQRPQHAPVNTTASSADPLGDAVAQEIALLEARLAALRDRQKAAGTPVADDAEGSADHVMDHVQVTPIGRLTFPVHTMFALGSPLGCFLTLRGLVLGRPGARPLCDRVYNVYHPYDPVAYRLEPVISRRLMDVRAEFVPYHKGGKRIHLEIQDLGQNITDRANQISQTFMASVTSIRGTLSRAFRIGGDGAVLAQQQVADDPAEAQREPIELLREFNPDGRLDFVLQDHPIESQYLSAINSHMGYWHNPDVALFLLARVYTEPPSYPRE* # ORIGINAL: g153.t1 original gene structure, not modified by PASA NODE_1218_length_12932_cov_40.773 AUGUSTUS gene 10901 11137 . - . ID=g153;Name=g153.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS mRNA 10901 11137 . - . ID=g153.t1;Parent=g153;Name=g153.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS exon 10901 11137 . - . ID=g153.t1.exon1;Parent=g153.t1 NODE_1218_length_12932_cov_40.773 AUGUSTUS CDS 10901 11137 . - 0 ID=cds.g153.t1;Parent=g153.t1 #PROT g153.t1 g153 MVFIGVGFGEPHHHHHHHHHHPHGPVVVVAGSRPPPMPAPVVVAPMPYAAPVIVAPSRGPTVVIETGHHHGHHHHHRY* # ORIGINAL: g9787.t1 original gene structure, not modified by PASA NODE_1752_length_9393_cov_58.7633 AUGUSTUS gene 5525 8777 . + . ID=g9787;Name=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS mRNA 5525 8777 . + . ID=g9787.t1;Parent=g9787;Name=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 5525 6028 . + . ID=g9787.t1.exon1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 5525 6028 . + 0 ID=cds.g9787.t1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 6175 6348 . + . ID=g9787.t1.exon2;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 6175 6348 . + 0 ID=cds.g9787.t1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 6488 6606 . + . ID=g9787.t1.exon3;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 6488 6606 . + 0 ID=cds.g9787.t1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 7034 7169 . + . ID=g9787.t1.exon4;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 7034 7169 . + 1 ID=cds.g9787.t1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 7409 7671 . + . ID=g9787.t1.exon5;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 7409 7671 . + 0 ID=cds.g9787.t1;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS exon 7904 8777 . + . ID=g9787.t1.exon6;Parent=g9787.t1 NODE_1752_length_9393_cov_58.7633 AUGUSTUS CDS 7904 8777 . + 1 ID=cds.g9787.t1;Parent=g9787.t1 #PROT g9787.t1 g9787 MPILKIPVRHSFGIVARGAHDEIATERRNDEQESQGRFSRPVFEEEALPEVNKAFVDAFNNCDDIDRAAFISLAEKILFRLKRLAGVSKSRRLRTNISKAWFELTLLSDCEGSIADIAYDLLVCSLEKTPLDGADISVLLHVGELSLVKVKQSALVGAAEEQCEKLMTVLELTFQRLLYYQRVGSLSMCAPHLDQYIKRFDAIGGCSSKDWANPGSQYAIYFVTEVNWLIECLKLLRDVEWERLSESAIDRLLMVLPGKLGGDGTWLDSVVLFKVLSHGAEAHVSVLRLLQCIVTRTMTACPWELLYKYTQLLAHVALHGKTSAIKKMALEGCSTFKLGNFEFHGTGLLALRYYHEGYNEDSHWKVRFGVVDSLAMLWQCGEGGIKTVAYTSLDEMRERERDHRVLSAVRFGNVHAAFDRLLTSESSPNDTIPSSLNGKMMMGLALHYMTEEDNPFGKLLAPLRNMKAASARPKRNGKAPSTRQRQPLDNRLLPELNRNKLDYKTRCALELQHMFDAAFEHKQRDQEEGMTRTLPALPPSPFNEPTRGPRSSKSRGKSRADCGIMPGATIGDKIQKDCAQDAGAANDDGGDDADDGYDFDGDEDGDDGSEAGLVRSPSWVIDEVERMEKEVREFESQIRSERDKHIAKLVSAVSIADAKKARRAKSGPRVPNHSKGSLLGAVSAFTAAT* # PASA_UPDATE: g9786.t1, single gene model update, valid-1, status:[pasa:asmbl_2519,status:12], valid-1 NODE_1752_length_9393_cov_58.7633 . gene 196 4715 . + . ID=g9786;Name=g9786.t1 NODE_1752_length_9393_cov_58.7633 . mRNA 196 4715 . + . ID=g9786.t1;Parent=g9786;Name=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 196 484 . + . ID=g9786.t1.exon1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 196 484 . + 0 ID=cds.g9786.t1;Parent=g9786.t1;5_prime_partial=true NODE_1752_length_9393_cov_58.7633 . exon 830 940 . + . ID=g9786.t1.exon2;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 830 940 . + 2 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 1199 1399 . + . ID=g9786.t1.exon3;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 1199 1399 . + 2 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 1596 1683 . + . ID=g9786.t1.exon4;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 1596 1683 . + 2 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 1862 2032 . + . ID=g9786.t1.exon5;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 1862 2032 . + 1 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 2451 2560 . + . ID=g9786.t1.exon6;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 2451 2560 . + 1 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 3160 3337 . + . ID=g9786.t1.exon7;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 3160 3337 . + 2 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 3480 3615 . + . ID=g9786.t1.exon8;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 3480 3615 . + 1 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 3728 3838 . + . ID=g9786.t1.exon9;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 3728 3838 . + 0 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 4027 4151 . + . ID=g9786.t1.exon10;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 4027 4151 . + 0 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . exon 4321 4715 . + . ID=g9786.t1.exon11;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . CDS 4321 4576 . + 1 ID=cds.g9786.t1;Parent=g9786.t1 NODE_1752_length_9393_cov_58.7633 . three_prime_UTR 4577 4715 . + . ID=g9786.t1.utr3p1;Parent=g9786.t1 #PROT g9786.t1 g9786 RRSVCVIVSSTYTDGAASDGTKYFHDWLDDVAHDFRIARSHLAGIRYALFGLGNSLYGDNFCASTKRMEGWMREVGAVAVVETGYGDENVANSKNGGLEGDFAAWKIGAIAAVVHAVAGGESSTVSGGDAHADGSAPEDEENEPVYETTSDEDDGDGPASEGEMVDVEDLGKVVGRSQGASSNNGPKGPRVRRKNNKGDAAEGSQKSEGDKKEVPEMITPALRSALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWKWKMDDAVTVVDGAMERHYAMIREMKGVPGVLPERLDEGMSIKHCALSLVGEPIMYPQINEFVDLLHRRRISSFLVTNAQFPDQMRTLQPVTQLYVSVDAATPDALKKIDRPLFKDYWQRFIDSLDALGEKGQRTVYRLTLVKAWNTEELTNYAALVSRGRPSFIEIKGVTFCGDSKASSLTMENVPWHTEVVSFVQQLADQLPDYELCCEHEHSHCLLLARKEFKIDGRWHTWIDYDRFHTLAQAHKETGATFTTMDYLAPTPDWALFGSTEHGFNPVDSRVLRKGKKDVSGC* # ORIGINAL: g13969.t1 original gene structure, not modified by PASA NODE_929_length_15786_cov_38.7976 AUGUSTUS gene 5091 7509 . - . ID=g13969;Name=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS mRNA 5091 7509 . - . ID=g13969.t1;Parent=g13969;Name=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 7405 7509 . - . ID=g13969.t1.exon1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 7405 7509 . - 0 ID=cds.g13969.t1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 7028 7181 . - . ID=g13969.t1.exon2;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 7028 7181 . - 0 ID=cds.g13969.t1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 6592 6762 . - . ID=g13969.t1.exon3;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 6592 6762 . - 2 ID=cds.g13969.t1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 6043 6142 . - . ID=g13969.t1.exon4;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 6043 6142 . - 2 ID=cds.g13969.t1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 5558 5843 . - . ID=g13969.t1.exon5;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 5558 5843 . - 1 ID=cds.g13969.t1;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 5091 5303 . - . ID=g13969.t1.exon6;Parent=g13969.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 5091 5303 . - 0 ID=cds.g13969.t1;Parent=g13969.t1 #PROT g13969.t1 g13969 MAAATAASIIRESTLPQLPAGGSAGRVEVVQLDGLVVMRILKHCRESLPDLVTGQLLGMVVENRLEVTNSFPFPSTTAEDDENDNEGVQYQLDMMRLLREVNVDHLSVGWYQSTYLGSFISEELIETQFNYQKNIEESVLLVYDPLRSTQGTLAIKAYRLTQTFMDIYKDADFTPERMKQAGLTYESVLEEIPIQIHNSHLVRGLLYELEDESAKFENFDRLDVPSAAYLEKSLGFLIECVDDLTAEQNRFQFYQRQVAKVQAQQNAYLQKRKLENAQRIAQGEEPLPDEDLSTNPLFKPLAAPNRLESVLLTTQINNYCKQITQFSGQSMTKLYLAGALQK* # PASA_UPDATE: g13971.t1, single gene model update, valid-1, status:[pasa:asmbl_10023,status:12],[pasa:asmbl_10024,status:12], valid-1 NODE_929_length_15786_cov_38.7976 . gene 10803 14133 . - . ID=g13971;Name=g13971.t1 NODE_929_length_15786_cov_38.7976 . mRNA 10803 14133 . - . ID=g13971.t1;Parent=g13971;Name=g13971.t1 NODE_929_length_15786_cov_38.7976 . five_prime_UTR 13930 14133 . - . ID=g13971.t1.utr5p1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 13815 14133 . - . ID=g13971.t1.exon1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 13815 13929 . - 0 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 13490 13650 . - . ID=g13971.t1.exon2;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 13490 13650 . - 2 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 13171 13284 . - . ID=g13971.t1.exon3;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 13171 13284 . - 0 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 12472 12964 . - . ID=g13971.t1.exon4;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 12472 12964 . - 0 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 11558 12296 . - . ID=g13971.t1.exon5;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 11558 12296 . - 2 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 11212 11419 . - . ID=g13971.t1.exon6;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 11212 11419 . - 1 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . exon 10803 11021 . - . ID=g13971.t1.exon7;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . CDS 10992 11021 . - 0 ID=cds.g13971.t1;Parent=g13971.t1 NODE_929_length_15786_cov_38.7976 . three_prime_UTR 10803 10991 . - . ID=g13971.t1.utr3p1;Parent=g13971.t1 #PROT g13971.t1 g13971 MSVPYLGSRISLVSVSDIRYEGTLYTIDTENSTVALQNVRSFGTEGRAKDGKELPPGNEVYDYIIFRGSDIKDLHVCETAAPAPMPHDPAIMRGPAPYGYPQQYGAPPGYRMPAGYPPYGYHPQYGYPGPQHMVPPQPHQQQPHQQQPHQQQPQQQPQQPPQQQQGPRPNQTPQQAQQAQAQTQAQAQAQKQPQAAAATEAPKSAAPPAKPTASPSAAVSTPATPAPSAAAGTTSAPAATATPAVTPAAAQATAAANAQKSADAAHAKSASAQKQTPQSAQQPRANAWGVKEPAATAPAPAASQSAAPVTATAAPTDAKSDEPKPQQRSVFDQPRSAAQQQQQRDLQPFAVDGQAPQSLQGENRQRRQYQPRQPQEGGDFQQQHSSWRGRGRGASSGAAGFAPHPHAQHQHQHQHQHQHANNQQQQPHQQSRGGAANYRGRGGAGGHRGGYSQPPATPVKFEGDFDFVSANERFRKDELSDALSTKLRVVDGDAAAAPDVAHEEEDNKEDHIIDGPSPKIAYEKSNFFDSISCEQTDKDERRDWGKERQMNLETFGVAGVHRRPRGGYGNRGGYRGGYNNRGGQGGQSGQGGRGGYGYNSRGGYNNGGNRPQFQSAPSS* # ORIGINAL: g13972.t1 original gene structure, not modified by PASA NODE_929_length_15786_cov_38.7976 AUGUSTUS gene 14552 15715 . + . ID=g13972;Name=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS mRNA 14552 15715 . + . ID=g13972.t1;Parent=g13972;Name=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 14552 15016 . + . ID=g13972.t1.exon1;Parent=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 14552 15016 . + 0 ID=cds.g13972.t1;Parent=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 15152 15328 . + . ID=g13972.t1.exon2;Parent=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 15152 15328 . + 0 ID=cds.g13972.t1;Parent=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 15500 15715 . + . ID=g13972.t1.exon3;Parent=g13972.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 15500 15715 . + 0 ID=cds.g13972.t1;Parent=g13972.t1 #PROT g13972.t1 g13972 MEVPADLLSAFESIAGIPLDDNDQQPTDTQFRNPDELMIDDDDNGVGEEENGFQQEVVGGMAGDVIAPAATLKDSAMEGITGAPLGALTADCEVPAPASASTATTGGDVKMADEDSSSDSDSDSDSDVELVDVHDDHDEGNENEVLRTKNELAHEQLPPVEIPKLELPANELIAEVGSVHSIVDTLVVVESKKNSRALDVDSILWSADRRPAGRVFDVFGPVSQPYYSLRFNNTEQMASLGLSVGTLLFYAPKYPDVTSYVLPVHMLIKFKGSDASWAHDEEPPEE # ORIGINAL: g13968.t1 original gene structure, not modified by PASA NODE_929_length_15786_cov_38.7976 AUGUSTUS gene 2062 4232 . + . ID=g13968;Name=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS mRNA 2062 4232 . + . ID=g13968.t1;Parent=g13968;Name=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 2062 2101 . + . ID=g13968.t1.exon1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 2062 2101 . + 0 ID=cds.g13968.t1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 2497 2630 . + . ID=g13968.t1.exon2;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 2497 2630 . + 2 ID=cds.g13968.t1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 2788 3109 . + . ID=g13968.t1.exon3;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 2788 3109 . + 0 ID=cds.g13968.t1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 3347 3685 . + . ID=g13968.t1.exon4;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 3347 3685 . + 2 ID=cds.g13968.t1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 3889 4051 . + . ID=g13968.t1.exon5;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 3889 4051 . + 2 ID=cds.g13968.t1;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS exon 4187 4232 . + . ID=g13968.t1.exon6;Parent=g13968.t1 NODE_929_length_15786_cov_38.7976 AUGUSTUS CDS 4187 4232 . + 1 ID=cds.g13968.t1;Parent=g13968.t1 #PROT g13968.t1 g13968 MSTPEKPVSKRPGDSDFKQQRLRAWQPILTPQTVIPTFFIIGLIFIPLGAIFYSSSQKVVEYSIDYTDCKPDPLSSLTCHHIVTILNVSCSCSYEFEVSEKMSSPVYMYYGLGNYYQNHRRYVKSRDDLQLSGQSGKAAPDCDPLDTTSGLNYAPCGLIANSLFNDSMTLSTGGSTIPLVGTGIAWKSDVKTKFKNPKPTNNLTQAFANTVNPPNWSPSLTISQFGGANTLHPNGEGYQNEDFIVWMRTAALPNFRKLYRKIEQDLVPGTKYNVTINYRYPVKQFDGTKKVIFSTSSWLGGKNPFLGIAYLVVGCICILLGLAFLIKHIVSPRALGDHQYLKWSTSS* # PASA_UPDATE: g13970.t1, single gene model update, valid-1, status:[pasa:asmbl_10025,status:12], valid-1 NODE_929_length_15786_cov_38.7976 . gene 8217 10454 . + . ID=g13970;Name=g13970.t1 NODE_929_length_15786_cov_38.7976 . mRNA 8217 10454 . + . ID=g13970.t1;Parent=g13970;Name=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 8217 8318 . + . ID=g13970.t1.exon1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 8217 8318 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 8520 8646 . + . ID=g13970.t1.exon2;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 8520 8646 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 8804 8928 . + . ID=g13970.t1.exon3;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 8804 8928 . + 2 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 9222 9344 . + . ID=g13970.t1.exon4;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 9222 9344 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 9605 9724 . + . ID=g13970.t1.exon5;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 9605 9724 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 10056 10118 . + . ID=g13970.t1.exon6;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 10056 10118 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . exon 10279 10454 . + . ID=g13970.t1.exon7;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . CDS 10279 10377 . + 0 ID=cds.g13970.t1;Parent=g13970.t1 NODE_929_length_15786_cov_38.7976 . three_prime_UTR 10378 10454 . + . ID=g13970.t1.utr3p1;Parent=g13970.t1 #PROT g13970.t1 g13970 MSRNYDRAITVFSPDGHLFQVEYALEAVRKGTAAVGVRGKNIVVLGVEKRSIAKLQDPRTVRKICMLDDHVCMAFAGLSADARVLVNKARVECQSYKLTVEDPVTIEYITRYIAGVQQKYTQSGGVRPFGISTLIMGFDYDGSPRLYQTDPSGIYSAWKASATGRSSKTVREYLEKHYSNEVADSDHETVKLAIKALLEVVQSGSKNIEIAVMRRNQPVQSLDLSEIESLVAEIEKEKEAEAAKKKEPQVPK* # PASA_UPDATE: g13576.t1, single gene model update, valid-1, status:[pasa:asmbl_946,status:12], valid-1 NODE_1247_length_12772_cov_40.9769 . gene 2794 8789 . - . ID=g13576;Name=g13576.t1 NODE_1247_length_12772_cov_40.9769 . mRNA 2794 8789 . - . ID=g13576.t1;Parent=g13576;Name=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 8562 8789 . - . ID=g13576.t1.exon1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 8562 8789 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 7893 8331 . - . ID=g13576.t1.exon2;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 7893 8331 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 7599 7695 . - . ID=g13576.t1.exon3;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 7599 7695 . - 2 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 6868 7234 . - . ID=g13576.t1.exon4;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 6868 7234 . - 1 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 6418 6597 . - . ID=g13576.t1.exon5;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 6418 6597 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 6035 6214 . - . ID=g13576.t1.exon6;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 6035 6214 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 5619 5871 . - . ID=g13576.t1.exon7;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 5619 5871 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 5085 5386 . - . ID=g13576.t1.exon8;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 5085 5386 . - 2 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 4501 4848 . - . ID=g13576.t1.exon9;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 4501 4848 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 4121 4243 . - . ID=g13576.t1.exon10;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 4121 4243 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 3895 3967 . - . ID=g13576.t1.exon11;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 3895 3967 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 3552 3661 . - . ID=g13576.t1.exon12;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 3552 3661 . - 2 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 3179 3399 . - . ID=g13576.t1.exon13;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 3179 3399 . - 0 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . exon 2794 3041 . - . ID=g13576.t1.exon14;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . CDS 2942 3041 . - 1 ID=cds.g13576.t1;Parent=g13576.t1 NODE_1247_length_12772_cov_40.9769 . three_prime_UTR 2794 2941 . - . ID=g13576.t1.utr3p1;Parent=g13576.t1 #PROT g13576.t1 g13576 MMLGVRTAMSAMGRRIPTGSGYVRSAMSPVASISRPYSAPASKEPHPSEGFLSGTSSNYFDEMHRAWKQNPSSVHKSWDVYFKNLAAGAPPGEAFVAPPSLGGAPGRPTGATVSADVIADHLKVQSLIRAYQVRGHNIANLDPLGINEVDLDSEVAPELQPQNYGFTEKDLDREFTIGTALTAGFMSADRPSMTLREIINRLQETYSKTIGIEYMHIPSREQCNWIRERIETRSKVQPDIEERRLILARLIRAEGFENFLAQKWSSEKRFGLEGGESLIPGMKAIIDRASEVGIEAIVMGMPHRGRLNVMGNVMRKPLETMFSEFTPSIDPNFIGSGDVKYHLGTSHDHVSKKTGKTVHLSLVANPSHLEAVNPVVQGKTRAEQYYRGDHTHDKVMSILLHGDAAFSGQGVVFETIGLSDLPYYTIGGTIHIVVNNQIGFTTDPRFSRSSPYCTDVAKTVGAPIFHVNGDDPEAVVQVCRLAMDWRTKFKKDVVIDIVCYRRHGHNEVDQPAFTQPLMYQRIAKHPTPLRIYADRLKAEGIVTEEEIAKEISKYKDVCVQAYEASKSYKSKPGDWLESYWHGFKSLTQLSRIRDTGVDVNILKRVGNTISSYPSDFAVHPALAKILGARMKMIETGQDIDWATGEALAFGTLLLEKNHVRLSGQDVERGTFSQRHHVLHDQKLDGKMYVPLNHLGAGQETYTVTNSSLSEYGVMGFELGYSMTRPNALVMWEAQFGDFANTAQVIIDQFISAGETKWLRQSGIVLLLPHAYEGMGPEHSSARLERFLQMSDDDPDVFPDMDHETRRQIQECNWQVVNCSTPANYYHVLRRQIHREFRKPLIVVTPKSLLRHPRARSTLADMKPGTRFRRLINEEILQPKSKDDIKRIVFCSGKIYYDLLKYREDHNISNVAIARVEQISPFPFDLIVRQAADFPKAEIVWCQEEPKNMGSWSYVGPRIETALKKSTTHSGLRPRYVGREPSASTATGNKKVHMAEEAVLLKEALVV* # ORIGINAL: g13575.t1 original gene structure, not modified by PASA NODE_1247_length_12772_cov_40.9769 AUGUSTUS gene 672 1971 . + . ID=g13575;Name=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS mRNA 672 1971 . + . ID=g13575.t1;Parent=g13575;Name=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 672 750 . + . ID=g13575.t1.exon1;Parent=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 672 750 . + 0 ID=cds.g13575.t1;Parent=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 870 987 . + . ID=g13575.t1.exon2;Parent=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 870 987 . + 2 ID=cds.g13575.t1;Parent=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 1146 1971 . + . ID=g13575.t1.exon3;Parent=g13575.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 1146 1971 . + 1 ID=cds.g13575.t1;Parent=g13575.t1 #PROT g13575.t1 g13575 MGLRDVFPDVSSLVIFFTYIGLFVNQALLITASRSGGSSYGYNMTTVVLFTEMLKLAIAASLSIRDNTLRGFLEKLTTKRRLFYLYFVPAFLYCLYNNLTFVNLSNFDPTTYYLLMQLRVVVTGIIFQVLFGKRLTKMQWASLAVLTAGCLLKEYGRSAKAAADSSTGDVAGEVSLLAFLTNPYFLLIVVQVFCSCFAGVYNEYLLKNEGPDVDVQTQNTFMYLDSILCNIVVVVATGKFEEAISTENLSAIFSYRVFPIIINNAMIGIVTSIFLKRLDSILKVFASALEIIFTAIAAYFAFGNVIDGYTVLAIICVSIAIYVYSLKPVKSETAAPTSKV* # ORIGINAL: g13577.t1 original gene structure, not modified by PASA NODE_1247_length_12772_cov_40.9769 AUGUSTUS gene 9622 10361 . - . ID=g13577;Name=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS mRNA 9622 10361 . - . ID=g13577.t1;Parent=g13577;Name=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 10078 10361 . - . ID=g13577.t1.exon1;Parent=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 10078 10361 . - 0 ID=cds.g13577.t1;Parent=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 9838 9901 . - . ID=g13577.t1.exon2;Parent=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 9838 9901 . - 1 ID=cds.g13577.t1;Parent=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 9622 9726 . - . ID=g13577.t1.exon3;Parent=g13577.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 9622 9726 . - 0 ID=cds.g13577.t1;Parent=g13577.t1 #PROT g13577.t1 g13577 MTGERSEMRTRSGRKAGSAEGAQDSSSFHSQTLKSVARHKSSGHPALSHKIAALSMEWDTERVVMIGASVIQLFTLLVAFITGYWSMLIPTILCGAFVLTHAVNETWQPLPVLKSMGFRSMREIVEEMTVLKVLRGDIGTLIPSPHQSEE* # ORIGINAL: g13578.t1 original gene structure, not modified by PASA NODE_1247_length_12772_cov_40.9769 AUGUSTUS gene 12161 12661 . + . ID=g13578;Name=g13578.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS mRNA 12161 12661 . + . ID=g13578.t1;Parent=g13578;Name=g13578.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS exon 12161 12661 . + . ID=g13578.t1.exon1;Parent=g13578.t1 NODE_1247_length_12772_cov_40.9769 AUGUSTUS CDS 12161 12661 . + 0 ID=cds.g13578.t1;Parent=g13578.t1 #PROT g13578.t1 g13578 MEDRRANLADGARDVVAALPQRHTSVNATTERRFSSDELGMLGPGSPLMATSTSANFASRTLSTIPAGAGATAGVLLVAAALDSNRFTIENAVLNDTHALKPLAIRSLVPYPVLVRLQSTLGSQLGFQLSNENIQDGVVVPPSEYNQVRQMRPNAATIYCSPVCEM* # PASA_UPDATE: g13574.t1, single gene model update, valid-1, status:[pasa:asmbl_945,status:12], valid-1 NODE_1247_length_12772_cov_40.9769 . gene 49 287 . + . ID=g13574;Name=g13574.t1 NODE_1247_length_12772_cov_40.9769 . mRNA 49 287 . + . ID=g13574.t1;Parent=g13574;Name=g13574.t1 NODE_1247_length_12772_cov_40.9769 . five_prime_UTR 49 49 . + . ID=g13574.t1.utr5p1;Parent=g13574.t1 NODE_1247_length_12772_cov_40.9769 . exon 49 287 . + . ID=g13574.t1.exon1;Parent=g13574.t1 NODE_1247_length_12772_cov_40.9769 . CDS 50 163 . + 0 ID=cds.g13574.t1;Parent=g13574.t1;5_prime_partial=true NODE_1247_length_12772_cov_40.9769 . three_prime_UTR 164 287 . + . ID=g13574.t1.utr3p1;Parent=g13574.t1 #PROT g13574.t1 g13574 GPSEADRSRAKCAGAGWLLWMLSAIVFAVFTECASCT* # PASA_UPDATE: g1368.t1, single gene model update, valid-1, status:[pasa:asmbl_7230,status:12], valid-1 NODE_4335_length_1799_cov_43.2187 . gene 2 1799 . + . ID=g1368;Name=g1368.t1 NODE_4335_length_1799_cov_43.2187 . mRNA 2 1799 . + . ID=g1368.t1;Parent=g1368;Name=g1368.t1 NODE_4335_length_1799_cov_43.2187 . five_prime_UTR 2 3 . + . ID=g1368.t1.utr5p1;Parent=g1368.t1 NODE_4335_length_1799_cov_43.2187 . exon 2 1799 . + . ID=g1368.t1.exon1;Parent=g1368.t1 NODE_4335_length_1799_cov_43.2187 . CDS 4 1799 . + 0 ID=cds.g1368.t1;Parent=g1368.t1;5_prime_partial=true;3_prime_partial=true #PROT g1368.t1 g1368 CDAGPAGSGRCTSCRAGYYGAACTQQCNCNGGVCNEGPSGDGKCTACPSGKYGPACAASCNCGGLSCSDGPAGNGDCTNCPLNTFGVTCQACNCNGGSCNDGPSGNGVCITCPANKYGSTCASTCSCNGGTCNAGPSGDGKCRSCPSGFYGLSCASACSCNGGVCNEGPAGDGKCLSCPSNKYGPACASSCDCNGGTCSDGPTGDGKCLTCPANYFGPKCATFCSASTTCNGRGTCDVATGACVCNSNSVGTGCDNCKAGYFGATCSGQCPAACTTCSDGPAGTGLCLSCPSNTYSTRCESRCLCATAGDCSAGPSGDGSCVACASNTFGSKCASTCDCSGGRCSDGPAGSGVCQTCPSGHYGARCASICTCNGGVCSEGPNGSGECQTCPTGTYGASCGSVCSCNGGSCSDGPAGTGTCLTCPVGYYGLSCQSRCNCNGGTCSDGPSGTGTCLTCPTGLYGAACSLRCDCNGGTCSDGPGGDGKCLTCPSNFFGQFCASKCDCNGGTCSDGPSGDGRCISCRAGFYGSRCDVFCDPLVSCNGNGACDIASGVCQCASKFTGLACDDCRTGFAGFNCTSACPAACVTCSQGISGTGLC # PASA_UPDATE: g14451.t1, single gene model update, valid-1, status:[pasa:asmbl_9484,status:3], valid-1 NODE_806_length_17473_cov_40.5352 . gene 1235 4062 . + . ID=g14451;Name=g14451.t1 NODE_806_length_17473_cov_40.5352 . mRNA 1235 4062 . + . ID=g14451.t1;Parent=g14451;Name=g14451.t1 NODE_806_length_17473_cov_40.5352 . five_prime_UTR 1235 1494 . + . ID=g14451.t1.utr5p1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 1235 1690 . + . ID=g14451.t1.exon1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 1495 1690 . + 0 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 1969 2210 . + . ID=g14451.t1.exon2;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 1969 2210 . + 2 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 2604 2685 . + . ID=g14451.t1.exon3;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 2604 2685 . + 0 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 2953 3050 . + . ID=g14451.t1.exon4;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 2953 3050 . + 2 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 3419 3540 . + . ID=g14451.t1.exon5;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 3419 3540 . + 0 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . exon 3877 4062 . + . ID=g14451.t1.exon6;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . CDS 3877 4036 . + 1 ID=cds.g14451.t1;Parent=g14451.t1 NODE_806_length_17473_cov_40.5352 . three_prime_UTR 4037 4062 . + . ID=g14451.t1.utr3p1;Parent=g14451.t1 #PROT g14451.t1 g14451 MSSKDRTSEFFSAVQSLRSRQGFGAASPGKKQHPLKEQNAQFSSIARKIGHDINNTFAKLEKLTILARNKSIFDDRPVEIQELTYIIKQDINNLNKQIGRLQQIQSQRGNGRTQNQKHSSNVVVSLQSKLAAMSNDFKGVLEVRTQNLREQQERREQFSQPMVPASMAAPPQNSSSPLFRDEGGDADFTLDVSGSAYQQLQFANQESSYIQSRSDAVQSIEATIVELGGIFQQLAHLVHAQDEQLQRIDQNVNDAELNIEAAHGELLKYFENISSNRWLMIKIFGILIVFFVFFVVFMA* # ORIGINAL: g14450.t1 original gene structure, not modified by PASA NODE_806_length_17473_cov_40.5352 AUGUSTUS gene 68 749 . - . ID=g14450;Name=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS mRNA 68 749 . - . ID=g14450.t1;Parent=g14450;Name=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 722 749 . - . ID=g14450.t1.exon1;Parent=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 722 749 . - 0 ID=cds.g14450.t1;Parent=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 455 580 . - . ID=g14450.t1.exon2;Parent=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 455 580 . - 2 ID=cds.g14450.t1;Parent=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 68 236 . - . ID=g14450.t1.exon3;Parent=g14450.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 68 236 . - 2 ID=cds.g14450.t1;Parent=g14450.t1 #PROT g14450.t1 g14450 MEGALRNKDVACACMSDLRERNPFEHLVRRLTEDQSSPSYYDLASLNDPRYERLPRCIKVLVESLVRNCDGFHVTADHVEAALDWENGQGGGGAVPFNPARVLLHDL # ORIGINAL: g14453.t1 original gene structure, not modified by PASA NODE_806_length_17473_cov_40.5352 AUGUSTUS gene 11286 13041 . + . ID=g14453;Name=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS mRNA 11286 13041 . + . ID=g14453.t1;Parent=g14453;Name=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 11286 11427 . + . ID=g14453.t1.exon1;Parent=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 11286 11427 . + 0 ID=cds.g14453.t1;Parent=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 11547 11979 . + . ID=g14453.t1.exon2;Parent=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 11547 11979 . + 2 ID=cds.g14453.t1;Parent=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS exon 12171 13041 . + . ID=g14453.t1.exon3;Parent=g14453.t1 NODE_806_length_17473_cov_40.5352 AUGUSTUS CDS 12171 13041 . + 1 ID=cds.g14453.t1;Parent=g14453.t1 #PROT g14453.t1 g14453 MQTPVATFQITKPSNPAGFAGGESITGVVTFIADAQVKAIVARFKGTEHSQWRKPATTKTVEAKRRFLEVKANVPFSKKQKIIASGTVLPFTIQLPQRLPMSFGVDDYKDDRISYMAELYYAVVVDIKLKKGSQKLKKFVAARPEDETDASTGPRSASGAVKCGLGACITATATVSRTWIRPGESATITIDISNDSKGHEVTGILVNALQAVEMTKSRWTKNGEVEGLLQAIVPGVTCKPKSRAHCSLDITWPNGPAENPVHPAGFSARRCSAKHASPSVVVEHFLRVRVMVAPTSTKKATTADERTVSIEMPMTVLPALQTEHKAAQDEVEEEWPEYSDDEDTAASDPAPTPALDPSPSQKSWMKGAVQIIPMGAALSASPAVTAKTTLRTIPQPQFLRALEERRMREEEETRREQQEQAEGEANQLRDDMDELSRLATEAGELIERARQRKLKAFEAASIRPHPRYAQEITFEIVGAAC* # PASA_UPDATE: g14452.t1, single gene model update, valid-1, status:[pasa:asmbl_9480,status:3], valid-1 NODE_806_length_17473_cov_40.5352 . gene 4040 9702 . - . ID=g14452;Name=g14452.t1 NODE_806_length_17473_cov_40.5352 . mRNA 4040 9702 . - . ID=g14452.t1;Parent=g14452;Name=g14452.t1 NODE_806_length_17473_cov_40.5352 . five_prime_UTR 9511 9702 . - . ID=g14452.t1.utr5p1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 9228 9702 . - . ID=g14452.t1.exon1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 9228 9510 . - 0 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 7270 8996 . - . ID=g14452.t1.exon2;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 7270 8996 . - 2 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 6925 7067 . - . ID=g14452.t1.exon3;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 6925 7067 . - 0 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 6570 6658 . - . ID=g14452.t1.exon4;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 6570 6658 . - 1 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 6286 6336 . - . ID=g14452.t1.exon5;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 6286 6336 . - 2 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . exon 4040 5905 . - . ID=g14452.t1.exon6;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . CDS 4413 5905 . - 2 ID=cds.g14452.t1;Parent=g14452.t1 NODE_806_length_17473_cov_40.5352 . three_prime_UTR 4040 4412 . - . ID=g14452.t1.utr3p1;Parent=g14452.t1 #PROT g14452.t1 g14452 MTFQDEFSVLRIAPPVGASIRNMAPRSRTHTQRTSIVSVNVLILAVYTLELLANVGAFEVTVVSPGNLFSDPVLDILHGDFGQSPSGTITAKLVAADDSLACSVESLRNAAALNGSVAIARRGACSFQVKLNSLMAVGALAAIIVQTNAVASPVPVIMTAINYGQPVSLDTIPGAMVSFADGNKLIDAVTSGTNVTMSVASAPAVSGDIAVLEELYSTLGGTNWQFPYGWNSVPRGNPCVGRGWFGVRCNSLGRVHALNVPKMNLAGALPVSLSNLVALKTLFISSNAGLRGSLPDVSFFPQLRMLEISSTGLLDTLSASLGGLSRLLYFKGDDTKISGSLPAGLLALPRLQYLSLAQCLLSGSLPSTWNLPSLKYLSLQGNKFAGVIAADAFSTLLALQTLDLSNNQFAGAVPRFVNMTSLQGVTLRNNLFSSVDADGAGTTFVGLSKLTTLDIALNRLSGNFFSIAGLPVLEQIDVSKNALSGPLHASFATVLTLRAIVASSNQVTAPLPAGLFNLRNLERVDLSFNKFDADFSAIFIGLVGASPTTLTSLDLSNNLLTGSIEFTTQPFGKLSSFDVSHNRLSGPVYGTLLANFEKVEYLDLSSNAFAGVVPQMIGRLNSLRYFSIANNTGMLDASLPSFVIPTDVFTKQPGTFFSCPTLSGQNSKLQVYIDHNYNGYQLCKCERGYYGAVPDCRLCLENSLCGIEASITGLNTTMVAPRGYYPMPYSPDPRDWRIIVACSKLSRGEVQCNPSSSSPFACAEGYEGRLCSKCAGGFYREGFVCTPCNYDVSRFTVAVFVIFAVCWFIGASLNDGYSFIGQAAMSVFTASQIVSIIIGRTAFHWPDEIYSSSRAIAWTLLSPEAITCLASMSPTQLLAYRVLLPLFAGVAAGIVLAVYLGIVKLVCWKTGATTPVDTEVNLSSICDTNKESVCAETDGGAANSGSTCGLSKKRGTLSTVSNLSLVSLAVVSRDRFRGQFRARWARVFLMILDLSYIPILFGIVNAFSCEADPLTGERFSRHYPWMSCDGSAYSSLQGIAIASIVVYVVGVPLLFVAALKATASPRFAAYHQRLVTVSGFYSEAYRPGCRYYEIVVLSKRIFFVILSSSNIGSYYTGVVFVFVVLATWVGLTTMLRPFHDPRMNRLETVSGYVTLLAIVSGVIFSSDVLSGSVVTCEAITFTIGCLLMGVYPFELLRHFVSLGAAPTVTSEPETAETFVQRVTRAVSDPVRRISVAWADEVETTQHAQHTQQQPPPVVAVP* # PASA_UPDATE: g14454.t1, single gene model update, valid-1, status:[pasa:asmbl_9485,status:3], valid-1 NODE_806_length_17473_cov_40.5352 . gene 13511 16957 . + . ID=g14454;Name=g14454.t1 NODE_806_length_17473_cov_40.5352 . mRNA 13511 16957 . + . ID=g14454.t1;Parent=g14454;Name=g14454.t1 NODE_806_length_17473_cov_40.5352 . five_prime_UTR 13511 13730 . + . ID=g14454.t1.utr5p1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 13511 13821 . + . ID=g14454.t1.exon1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 13731 13821 . + 0 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 14086 14141 . + . ID=g14454.t1.exon2;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 14086 14141 . + 2 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 14302 14438 . + . ID=g14454.t1.exon3;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 14302 14438 . + 0 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 14727 14892 . + . ID=g14454.t1.exon4;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 14727 14892 . + 1 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 15321 15367 . + . ID=g14454.t1.exon5;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 15321 15367 . + 0 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . exon 15556 16957 . + . ID=g14454.t1.exon6;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . CDS 15556 16528 . + 1 ID=cds.g14454.t1;Parent=g14454.t1 NODE_806_length_17473_cov_40.5352 . three_prime_UTR 16529 16957 . + . ID=g14454.t1.utr3p1;Parent=g14454.t1 #PROT g14454.t1 g14454 MAPTITTSLAVVVMAACVATALSVHGTKIIGHRGDPYYVPGHTLASYSIAIAEGVDFVEPDVVMTRDFRLICRHDLDLEQSTDVGNRTEFADRRRSLYAESVAKSIVSWWVEDFTLEEVRSLRCVQRVSNPAWRDPYFNGMFSVPTFEETIQFVVQRTKETGRPIGLIPELKSPYHYSRVSAENGLSDTYFADEFLRILGEYGYLGDNPPGPLIVQCAESRTLRYLRSKHPSLQTLQLVFGDGFEPDSGYAHDTYLTRTGMDDLKSFASAIGPWKEFLAVGKGAQWWFGNMSGLVPPELAGRLRRNGTVSQPYVRPEDVVRELHKRGIAVYPWTFRNPLEDASAATAAAAADGDVAAEVRRFLSMGVDGIFVEKALPSLYVRDVQASCANSCPAPDDGGGDGVVARNSCIGSVSSSATAAIGVSCAVGGAFLMLFVQFVVARIRMRRNGGGGAYMRTSGRHSTRVLGNHMGMSMMNADADDASDTLFDD* # PASA_UPDATE: g7085.t1, single gene model update, valid-1, status:[pasa:asmbl_5315,status:12], valid-1 NODE_2961_length_4637_cov_83.2672 . gene 80 1270 . - . ID=g7085;Name=g7085.t1 NODE_2961_length_4637_cov_83.2672 . mRNA 80 1270 . - . ID=g7085.t1;Parent=g7085;Name=g7085.t1 NODE_2961_length_4637_cov_83.2672 . five_prime_UTR 1118 1270 . - . ID=g7085.t1.utr5p1;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . exon 719 1270 . - . ID=g7085.t1.exon1;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . CDS 719 1117 . - 0 ID=cds.g7085.t1;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . exon 457 613 . - . ID=g7085.t1.exon2;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . CDS 457 613 . - 0 ID=cds.g7085.t1;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . exon 80 240 . - . ID=g7085.t1.exon3;Parent=g7085.t1 NODE_2961_length_4637_cov_83.2672 . CDS 80 240 . - 2 ID=cds.g7085.t1;Parent=g7085.t1;3_prime_partial=true #PROT g7085.t1 g7085 MSFGQLVIGPPGSGKTTYCSGMRDFLTAGGRKVRIVNLDPANDNLPEDVAVDVCDLITVEDVMDRLDLGPNGGLVYCLEFVEKNYEWLEARLKEAGLGKESYFLFDCPGQVELYTHNAVMRRLAQRLEKTGVRLVSVHLVDAHYCSDPSKFISVLLTSLSTMIQIELPHVNVLSKIDLIERYGKLAFNLDFYTDVLDLSYLVGRINDDPFLGRFKDLNEKLCELVEDYSLVSFSTLNIQ # ORIGINAL: g7086.t1 original gene structure, not modified by PASA NODE_2961_length_4637_cov_83.2672 AUGUSTUS gene 3958 4551 . + . ID=g7086;Name=g7086.t1 NODE_2961_length_4637_cov_83.2672 AUGUSTUS mRNA 3958 4551 . + . ID=g7086.t1;Parent=g7086;Name=g7086.t1 NODE_2961_length_4637_cov_83.2672 AUGUSTUS exon 3958 4551 . + . ID=g7086.t1.exon1;Parent=g7086.t1 NODE_2961_length_4637_cov_83.2672 AUGUSTUS CDS 3958 4551 . + 0 ID=cds.g7086.t1;Parent=g7086.t1 #PROT g7086.t1 g7086 MATTSHFIVATTPPVSFLSLPIEVIVCHFVPLLSNKDIASLAGVNSRLCCVLKHVRVYRLRSAFAKEYWLSAAFCNAVWTDIPRERLELDLDGVHSVHGDLSVLGGVRSLNVSNCTRVMDVSALGGVRSLNVSNCTRVMDVSALGGVHSLNLYYCEGVTDVSALGGVHSLDLSYCKGVTDVSALGGVHSLNSLVALK* # PASA_UPDATE: g2408.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7122,status:12],[pasa:asmbl_7125,status:12],[pasa:asmbl_7126,status:12], valid-1 # PASA_UPDATE: g2408.t1, single gene model update, valid-1, status:[pasa:asmbl_7123,status:12], valid-1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . gene 17986 22274 . - . ID=g2408;Name=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . mRNA 17986 22274 . - . ID=g2408.t1.1.5b6be70c;Parent=g2408;Name=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . five_prime_UTR 22163 22274 . - . ID=g2408.t1.1.5b6be70c.utr5p1;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 21460 22274 . - . ID=g2408.t1.1.5b6be70c.exon1;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 21460 22162 . - 0 ID=cds.g2408.t1.1.5b6be70c;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 20676 21213 . - . ID=g2408.t1.1.5b6be70c.exon2;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 20676 21213 . - 2 ID=cds.g2408.t1.1.5b6be70c;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 20321 20479 . - . ID=g2408.t1.1.5b6be70c.exon3;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 20321 20479 . - 1 ID=cds.g2408.t1.1.5b6be70c;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 17986 20076 . - . ID=g2408.t1.1.5b6be70c.exon4;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 18312 20076 . - 1 ID=cds.g2408.t1.1.5b6be70c;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . three_prime_UTR 17986 18311 . - . ID=g2408.t1.1.5b6be70c.utr3p1;Parent=g2408.t1.1.5b6be70c NODE_422_length_24033_cov_24.9181_potentialcontaminant . mRNA 17986 22274 . - . ID=g2408.t1;Parent=g2408;Name=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . five_prime_UTR 22163 22274 . - . ID=g2408.t1.utr5p1;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 20676 22274 . - . ID=g2408.t1.exon1;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 20676 22162 . - 0 ID=cds.g2408.t1;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 20321 20479 . - . ID=g2408.t1.exon2;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 20321 20479 . - 1 ID=cds.g2408.t1;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 17986 20076 . - . ID=g2408.t1.exon3;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 18312 20076 . - 1 ID=cds.g2408.t1;Parent=g2408.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . three_prime_UTR 17986 18311 . - . ID=g2408.t1.utr3p1;Parent=g2408.t1 #PROT g2408.t1.1.5b6be70c g2408 MSSEGQTHRRSAYVERHNEGGHPPNQNRRMTHDNVHWPEIPPRDSHADDCLEEPHLPPCGDRGLFSSLRPLGHSEGRYLSEHGRGGRGGYGGRSGYSYTSQRFDVRDHGRCDPSPPLVSGPEPRKQTLEEKLDKLNQRISELTSTLVNFRSDVNKMFGELFRTNERNSVDGTPTLAPQQRPGPPQTQQHLRTRHDDLQTQHMHGARHDDMRTPHIHASVHHDDSRTQHHPQQPQHPQHQPQHPQHQPQHPQHQPHPQHQPQHPQHQPQHPQHQPQHPQHQPQAQGVRRPSAEVSAKTEPRKKVRMMVVPDNRMSVVIDNADEHDNSGARGVNNSQNKTGNGYKADMVSINAAAARNYCLILPSTDNNASGTPLQHPPVTGNPMLRKRKSDADDGPRNKRARDFNAKLPEPHGLRDIIRLIRLAVNVRMPRDKQQPNLNIICSALAMNFIGTTCLYPGCERNGVPLNSFRNLQTHWVRHLKDPRIFPCDFCNESYSQQASQLRHELEVHQGGVWLRLLAELLKMPRELRLELPIELRETIDQAEANGAISDPNDSVFGPSSLLTQVNLSNAGNSAESATAPTTESSDHAAAATAATTEVSDHAAAATMKVDHAAAATTEGDDLATAAILEGGDHVAAPTEVVGHAAAVMMEVDRAASATTEGGDHTVAATTDVSVHAVAATMDVDRAASATTEGGDHATTVTTEGDDPVAAPTEVNVYAVAATMEVDHAAAGGDHVAATMEVSVYTAAASMEVDHAAAAITEGGDYVAATTEVSDHAAAAITEVGDHAAAMTPVTAVPAEVSDASSVAPTISSVSVDVVMCDADEEDISWPEEDAKSGNDGVVENAVYVDSVPPTANVAATVPALTAISSVSVEVVLCDADKEGISLSEDISLSEEDISLSEDDVVLIEITESGSDSDVVVENAGDVDAVPLTANVAASVPAPAVMQREVTMGKDSDARAKEEQVKVIESEIETDKEMDNEAGKEHDAEADGEKIGNDGETDIDDEQDHSPCASDFRPLPALVPSTNFTRPTVEHPIMRVKTHSRRRIRRNRPKF* #PROT g2408.t1 g2408 MSSEGQTHRRSAYVERHNEGGHPPNQNRRMTHDNVHWPEIPPRDSHADDCLEEPHLPPCGDRGLFSSLRPLGHSEGRYLSEHGRGGRGGYGGRSGYSYTSQRFDVRDHGRCDPSPPLVSGPEPRKQTLEEKLDKLNQRISELTSTLVNFRSDVNKMFGELFRTNERNSVDGTPTLAPQQRPGPPQTQQHLRTRHDDLQTQHMHGARHDDMRTPHIHASVHHDDSRTQHHPQQPQHPQRPQLPQYQPQHPQQPQYPQFQPQYPQRQPQHPQQHPQQPQHPQQQPQHPQQPQHPQQQPQHPQQPQHPQHQPQHPQQPQHPQHQPQHPQHQPQHPQHQPHPQHQPQHPQHQPQHPQHQPQHPQHQPQAQGVRRPSAEVSAKTEPRKKVRMMVVPDNRMSVVIDNADEHDNSGARGVNNSQNKTGNGYKADMVSINAAAARNYCLILPSTDNNASGTPLQHPPVTGNPMLRKRKSDADDGPRNKRARDFNAKLPEPHGLRDIIRLIRLAVNVRMPRDKQQPNLNIICSALAMNFIGTTCLYPGCERNGVPLNSFRNLQTHWVRHLKDPRIFPCDFCNESYSQQASQLRHELEVHQGGVWLRLLAELLKMPRELRLELPIELRETIDQAEANGAISDPNDSVFGPSSLLTQVNLSNAGNSAESATAPTTESSDHAAAATAATTEVSDHAAAATMKVDHAAAATTEGDDLATAAILEGGDHVAAPTEVVGHAAAVMMEVDRAASATTEGGDHTVAATTDVSVHAVAATMDVDRAASATTEGGDHATTVTTEGDDPVAAPTEVNVYAVAATMEVDHAAAGGDHVAATMEVSVYTAAASMEVDHAAAAITEGGDYVAATTEVSDHAAAAITEVGDHAAAMTPVTAVPAEVSDASSVAPTISSVSVDVVMCDADEEDISWPEEDAKSGNDGVVENAVYVDSVPPTANVAATVPALTAISSVSVEVVLCDADKEGISLSEDISLSEEDISLSEDDVVLIEITESGSDSDVVVENAGDVDAVPLTANVAASVPAPAVMQREVTMGKDSDARAKEEQVKVIESEIETDKEMDNEAGKEHDAEADGEKIGNDGETDIDDEQDHSPCASDFRPLPALVPSTNFTRPTVEHPIMRVKTHSRRRIRRNRPKF* # ORIGINAL: g2400.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 2583 3611 . + . ID=g2400;Name=g2400.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 2583 3611 . + . ID=g2400.t1;Parent=g2400;Name=g2400.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 2583 3611 . + . ID=g2400.t1.exon1;Parent=g2400.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 2583 3611 . + 0 ID=cds.g2400.t1;Parent=g2400.t1 #PROT g2400.t1 g2400 MAGCDLALQKQLCRCRSCNVLSMHDEYVRAKLLELLVQRFGIRATQEYIFRGMFTRNPADPVLPLPTKKTEAQRQSTTLRQSTEEKRRNVWRKANSSCGGETLQGFVNAGHTIEYSVSDVKRWKQRVAELRRAYPCLITAFETGTSGEANAGFALILRQDLLGMFSNMSLSVHPTVKAELAGRYGVGKLVEFFGTKWNVAADCQYYTMFPDLERGMGGIANAWDVTPRQGTYLVNPPYTEAVIVEILARIKWWLTRAAYKKADLTFIVVIPAWDKKTRRQCGIVDEYDMPEINAFLELPYVCEHKVDMQFPFWDALREKAAFIRGVPVHTIHARSAAHRGFV* # ORIGINAL: g2407.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 17038 17568 . + . ID=g2407;Name=g2407.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 17038 17568 . + . ID=g2407.t1;Parent=g2407;Name=g2407.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 17038 17568 . + . ID=g2407.t1.exon1;Parent=g2407.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 17038 17568 . + 0 ID=cds.g2407.t1;Parent=g2407.t1 #PROT g2407.t1 g2407 MAELDVKDQNWHDWPERYLYDSGNWTVFPFMGFGIWHNENCKRMPAITEFLRKIPNLRLAVLSKMAAHTKLTPHQGWASHSNGVLRCHYGLQIPEDCVVKVKTARGVQEREYKTDEWIVFDDSEVHWSENNSNESRIVLIVDIKRPCNIRRGVSTIGDSKELLEFVKQMSRNKSHE* # PASA_UPDATE: g2405.t1, single gene model update, valid-1, status:[pasa:asmbl_7121,status:8],[pasa:asmbl_7124,status:3], valid-1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . gene 12948 14306 . + . ID=g2405;Name=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . mRNA 12948 14306 . + . ID=g2405.t1;Parent=g2405;Name=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . five_prime_UTR 12948 13011 . + . ID=g2405.t1.utr5p1;Parent=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 12948 13594 . + . ID=g2405.t1.exon1;Parent=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 13012 13594 . + 0 ID=cds.g2405.t1;Parent=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 13676 14306 . + . ID=g2405.t1.exon2;Parent=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 13676 14136 . + 2 ID=cds.g2405.t1;Parent=g2405.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . three_prime_UTR 14137 14306 . + . ID=g2405.t1.utr3p1;Parent=g2405.t1 #PROT g2405.t1 g2405 MTTAHPNPEWPLLLYTHTPGATGSWGTGFLVTKEPPLPEIPTTGISAGPPLSAAEMDKLVEAQLPARSMTSSELAERDARKLASEADAEARFQDQGNWEVCVEDDARTPPSVYLVTNVHVVDGFSHVTVYFRPKHGSDFNTVTLALVDSQGRPLWRCTPSDPVISNEVPHHFHLLKGSGICVHDVAVIPLRIKDGHAKGISLPKESIEGLPFPRTNEPEVHPGRAIASAGFPLLNNVEAGVWAYREPCVVQGNIATRLPHCKEVRIIAPLMWGSSGSLVYTVEDYNGTARIFPIGVMSSITLLNHEKAIEHNIRDSGVRQVCSWELVEGLVLGGGHGYVKVVAPYPA* # PASA_UPDATE: g2404.t1, single gene model update, valid-1, status:[pasa:asmbl_7120,status:12], valid-1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . gene 11766 12295 . - . ID=g2404;Name=g2404.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . mRNA 11766 12295 . - . ID=g2404.t1;Parent=g2404;Name=g2404.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . five_prime_UTR 12254 12295 . - . ID=g2404.t1.utr5p1;Parent=g2404.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . exon 11766 12295 . - . ID=g2404.t1.exon1;Parent=g2404.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . CDS 11780 12253 . - 0 ID=cds.g2404.t1;Parent=g2404.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant . three_prime_UTR 11766 11779 . - . ID=g2404.t1.utr3p1;Parent=g2404.t1 #PROT g2404.t1 g2404 MKYNTRAVFKCLHSSSKTSKTTSRLLIKVTTPELSFVEIPPFIEDAEATVMQFPPSSPMNTTDTQYPSLECLSELSDIETATESPRALLGKLNKRLRAFSSATADAEKVKAGNSVSFMTRKLVLALAASCGDSVVDLRAVNRAMKRLARFHKAQRNK* # ORIGINAL: g2401.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 4498 5332 . + . ID=g2401;Name=g2401.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 4498 5332 . + . ID=g2401.t1;Parent=g2401;Name=g2401.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 4498 4786 . + . ID=g2401.t1.exon1;Parent=g2401.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 4498 4786 . + 0 ID=cds.g2401.t1;Parent=g2401.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 4986 5332 . + . ID=g2401.t1.exon2;Parent=g2401.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 4986 5332 . + 2 ID=cds.g2401.t1;Parent=g2401.t1 #PROT g2401.t1 g2401 MTIPYGCGKRQHASARVFSLGILRRSSRLHFRVMEACVSWDKTVQLRNVTTDMLVGGPALPTVYLPFRSDGKSTNDDTEEKRVTERIGLGTDKGNTGEQQTMRQSVKSQSCDDTNDKEMDGSQSRETHDTQTRETHDTQTRETHDTQTRETHDMQPRETQWREADAHDLQLTNMDDTISTDVPDADTELQVGLCEAGIHPEFARRFRYIGQ* # ORIGINAL: g2406.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 14746 15651 . - . ID=g2406;Name=g2406.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 14746 15651 . - . ID=g2406.t1;Parent=g2406;Name=g2406.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 14746 15651 . - . ID=g2406.t1.exon1;Parent=g2406.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 14746 15651 . - 0 ID=cds.g2406.t1;Parent=g2406.t1 #PROT g2406.t1 g2406 MSSHFDSLLSGDLEGCLEQLKVLLAVDASEYIHFITQQLSLEAKNAFSEQLLSFVSANETFESNWEFFLNKSIEYDHVELFEKCIGNKFSDYSSFTTSHKCPSSGFSFESEGRFSTELRELKAVFKEIFSNNASKIMKSFIKDPKISQWNSATMVAFFALEEYAKSNPRWFECAAVGDLLRDQTVVDKKQVWYLLNGDGDGKYRGAPEVFGVLLLCIFYHETPQLNELDHVPASLYFDTAKQSQGTFQKALEMAVCESRHQAVIDKIFHRFRGTQILNIILDNLNTDSLAYQIASQQVSVY* # ORIGINAL: g2403.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 7158 9623 . + . ID=g2403;Name=g2403.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 7158 9623 . + . ID=g2403.t1;Parent=g2403;Name=g2403.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 7158 8466 . + . ID=g2403.t1.exon1;Parent=g2403.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 7158 8466 . + 0 ID=cds.g2403.t1;Parent=g2403.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 8872 9623 . + . ID=g2403.t1.exon2;Parent=g2403.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 8872 9623 . + 2 ID=cds.g2403.t1;Parent=g2403.t1 #PROT g2403.t1 g2403 MELIAPDIYTIKEYDAKVKWGRKVQSPTEIVPNLFLMGTGVPDEVLHSTFDTRPIEGVVSMGSEHANWFLKTFCKDVSHVLKFNFEDSVVTNIVDHFDDIADFLHDNISAGKCTVAFCRAGMSRSAAVVAYYLTKYHNMTLPDALRWIMERRCIYINDGFCFQLYAKITCLAQAKLKHAGEFLYARNDIVKPKKTYKRTQTKQDEQTTEQTTEQTTEQTTEQDEQDEQDAIDQEIDRLDSNVGLYPSIAAAMAQHGCWDCLETEMYLIPVTSVSILYYKHRQMFEVSKSQHLKLIMDSVDNFVPEIDAGFRDCVAVMKMSEVIKYNKINMMANLMNGSVDLSNKTIFEHEFDKCTDIKFKRTVATSILEVIAYDHSYSHQTVIQCGHRLQRYILDSEEDEFQHSRCCDNLVSRMYECKENKLPEKRGFKKLICALQDIYTERRDMIVIVINPTMTSETTAKLRTAESTVDLLHKVLAEVENLKAERKVSDERVEAERKVSDKRVAKIELRLNYISIGPILERICWKLVASMQQPACLPGWITSRPTQLREIEKKNKRNARLVFEFICFRRYEETWKEYTARTSDLQKDLRIAFASLYKKVDDDFMKKRHQRTGMTTESDRLLELVTACTINRNRVAHELGNADELKVLLNSFDFPKTNCKLTETDDLRALMTYFLQSNSTPLSVVL* # ORIGINAL: g2409.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 23094 23684 . + . ID=g2409;Name=g2409.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 23094 23684 . + . ID=g2409.t1;Parent=g2409;Name=g2409.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 23094 23684 . + . ID=g2409.t1.exon1;Parent=g2409.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 23094 23684 . + 0 ID=cds.g2409.t1;Parent=g2409.t1 #PROT g2409.t1 g2409 MLHKRLKNNVEEYKATDIQKFSQEHFPIEQMSADDAVRMYGNQHNILLLNNPPPSSRNEGYWDYFSIQEWTRQYTDCDRWLIFCGELGASDGSIGMYKFLMEHPQWQCVLRQTYYSGEDMFGDDLIKEVFIFQRVPPRAAGPLPHATSERAPPRVTPNRVLRSTRQAKRHVPPHATPERVLRRSTRQAKQHIPLSS* # ORIGINAL: g2402.t1 original gene structure, not modified by PASA NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS gene 5360 5578 . - . ID=g2402;Name=g2402.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS mRNA 5360 5578 . - . ID=g2402.t1;Parent=g2402;Name=g2402.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS exon 5360 5578 . - . ID=g2402.t1.exon1;Parent=g2402.t1 NODE_422_length_24033_cov_24.9181_potentialcontaminant AUGUSTUS CDS 5360 5578 . - 0 ID=cds.g2402.t1;Parent=g2402.t1 #PROT g2402.t1 g2402 MSIADLSCTTRDTGKHFMPLGRQRFTKVLQNEIADVPEILFNAARADRTELSAYAAVAFIEIRFYIIETAAN* # ORIGINAL: g1957.t1 original gene structure, not modified by PASA NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS gene 3370 5269 . - . ID=g1957;Name=g1957.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS mRNA 3370 5269 . - . ID=g1957.t1;Parent=g1957;Name=g1957.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS exon 4493 5269 . - . ID=g1957.t1.exon1;Parent=g1957.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS CDS 4493 5269 . - 0 ID=cds.g1957.t1;Parent=g1957.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS exon 3370 4251 . - . ID=g1957.t1.exon2;Parent=g1957.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS CDS 3370 4251 . - 0 ID=cds.g1957.t1;Parent=g1957.t1 #PROT g1957.t1 g1957 MKLYVRAMTVLVLTVAATALPTFPNIGYLGDGYDLLFGNPHNTDPRNSPDPGFRAPIFNLTLYDRGGPTPDNRYQVPMGVSVDICSACQVQFSSVLSTGTSSFASSLQEDVSFSIKGWDAAFKASVDFKQVEKRTQNHSSVVLETAAICCVYTASLATYAGAAPPFTADFSSAIDSMPTEYDPTSAANLNWFSNFFMHFGTSFPTRVAMGGRFGVRYSIDSHAFSVLSSSNINVNVAASYSALSFSAAASSMTDVGKSQADYFNSQTTTSVTFNVGGTLPASGKYQDWIPLVQEQPMPIHLQLSSLDQLLNPMLFPQIDGKMLAAKQAALVEALTNYCLNVVAQGALVDCNPPLPDVPPPPPSIFGGTYQVDPCGADQKVNPYTNGLSCPAGFTYTSIAQVMTPLKKCAAQIYLCLRSTAGGVDPLGYFGGMYQKDDLDAGGRPNPLTGHMSCPAGFSSHRVGRVLSTDYKQGTAVNMCLNLDVDYTRNPIGGAYQQGDLSPKATVVNPITGAASCPPKYTPYRIARIVAPEPSGYLWGATMFLCLNNVVPL* # PASA_UPDATE: g1956.t1, single gene model update, valid-1, status:[pasa:asmbl_2856,status:12], valid-1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant . gene 436 1476 . - . ID=g1956;Name=g1956.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant . mRNA 436 1476 . - . ID=g1956.t1;Parent=g1956;Name=g1956.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant . five_prime_UTR 1417 1476 . - . ID=g1956.t1.utr5p1;Parent=g1956.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant . exon 436 1476 . - . ID=g1956.t1.exon1;Parent=g1956.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant . CDS 436 1416 . - 0 ID=cds.g1956.t1;Parent=g1956.t1 #PROT g1956.t1 g1956 MGQVATFSNLQKTLDDVRGKILCVKDSACVTLPISRTSPDTARTGIKTFLKQVENSTEMENKCLQPAMITLLKTVTDLVVKDHHDGKGTSADFKIDACVYLPRVSSIIQNLAVIFEAKRECMIGARNVALMSMASLIGQLEQYAKIILDASPSRLFVFSVIVTEARFAIIRFSKTDDPCKLTYFSVGAHAEYPWRDDGAAAALLSILRADNPETTLGVSAVALPSPFDRLHIHGLLGVGRTCEAYAVSTKPNTDRFVLKVYKGENAAEYAVREVAVLHRLSQAIKDAAENHGLLENILCRLQLDGKVDDFKMFWDRAEQRCCGIEK* # ORIGINAL: g1958.t1 original gene structure, not modified by PASA NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS gene 7816 8817 . - . ID=g1958;Name=g1958.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS mRNA 7816 8817 . - . ID=g1958.t1;Parent=g1958;Name=g1958.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS exon 7816 8817 . - . ID=g1958.t1.exon1;Parent=g1958.t1 NODE_1869_length_8817_cov_22.3447_potentialcontaminant AUGUSTUS CDS 7816 8817 . - 0 ID=cds.g1958.t1;Parent=g1958.t1 #PROT g1958.t1 g1958 VHPSTNKTYCTSALFDVDGSLLGTYRKRYPTCGGTITSPGDECGRVFVSALGRIGVAICYDAEHDDIMDSLIAQNADVILNPVAIFRPSSSGAIGGAQSAQRTALGVVARAFEWRMTEARCTLIRCDNPSSAGYLGSTICIGAVHTAYAPSPNVCALVCECSDFDAFPAATQRPERERTERRDNSGNHTVAATVIDHGASVTSISFVGRVHIRVTDARGSVSTWNVVTRTTDHAPSAVSGSASSNGGSLSSSCEGRLSLAVSEKVAIERSCEDSRVVVVRIGNESMRLQGHLGHVTAIATESAWVATGDDRGRVIVWAFEQNRSPRSPVDLWK* # PASA_UPDATE: g2187.t1, single gene model update, valid-1, status:[pasa:asmbl_6353,status:12], valid-1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . gene 428 3035 . - . ID=g2187;Name=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . mRNA 428 3035 . - . ID=g2187.t1;Parent=g2187;Name=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . exon 2937 3035 . - . ID=g2187.t1.exon1;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . CDS 2937 3035 . - 0 ID=cds.g2187.t1;Parent=g2187.t1;5_prime_partial=true NODE_3648_length_3035_cov_64.0196_potentialcontaminant . exon 2292 2585 . - . ID=g2187.t1.exon2;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . CDS 2292 2585 . - 0 ID=cds.g2187.t1;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . exon 1864 1927 . - . ID=g2187.t1.exon3;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . CDS 1864 1927 . - 0 ID=cds.g2187.t1;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . exon 1286 1393 . - . ID=g2187.t1.exon4;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . CDS 1286 1393 . - 2 ID=cds.g2187.t1;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . exon 428 855 . - . ID=g2187.t1.exon5;Parent=g2187.t1 NODE_3648_length_3035_cov_64.0196_potentialcontaminant . CDS 428 855 . - 2 ID=cds.g2187.t1;Parent=g2187.t1 #PROT g2187.t1 g2187 ALGFNVIRLCLTWSQLEPTPGVYDKIFLARVAQIISWAKEQDIYVIIDMHEDLYSRFIFGDVTRQQPPYLTACDGQDGAPAWAVATSDLWPALCVMGQGNFNLAMMYAFDKFYDNADIGVEQGEAPGRGLQDHYIGAIAAMARMFINESTVLGYEIMNEPQPGTHIEPFGFASKYLYPFYKRVIQAITGVRDGLPDCPPGQTTGHCAYPDLGIHDTRHLMVYEPNALRNQLDFSPQTCEPFTEYPNIVFAPHTYTHSFTIDQQIFHWPINNTEYPPSFDFAYDNAVEEAAAMNSALFVTEYGCGPDQDWYLLNGIVNAQDKHATGSTMWS* # PASA_UPDATE: g11926.t1, single gene model update, valid-1, status:[pasa:asmbl_6090,status:3], valid-1 NODE_345_length_26388_cov_41.6644 . gene 10120 13239 . - . ID=g11926;Name=g11926.t1 NODE_345_length_26388_cov_41.6644 . mRNA 10120 13239 . - . ID=g11926.t1;Parent=g11926;Name=g11926.t1 NODE_345_length_26388_cov_41.6644 . five_prime_UTR 13208 13239 . - . ID=g11926.t1.utr5p1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 12581 13239 . - . ID=g11926.t1.exon1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 12581 13207 . - 0 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 11931 12377 . - . ID=g11926.t1.exon2;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 11931 12377 . - 0 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 11519 11745 . - . ID=g11926.t1.exon3;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 11519 11745 . - 0 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 11056 11250 . - . ID=g11926.t1.exon4;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 11056 11250 . - 1 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 10685 10783 . - . ID=g11926.t1.exon5;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 10685 10783 . - 1 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . exon 10120 10394 . - . ID=g11926.t1.exon6;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . CDS 10142 10394 . - 1 ID=cds.g11926.t1;Parent=g11926.t1 NODE_345_length_26388_cov_41.6644 . three_prime_UTR 10120 10141 . - . ID=g11926.t1.utr3p1;Parent=g11926.t1 #PROT g11926.t1 g11926 MGRPKGKSKGPATADEGTVSESVGVDGTVPSVIANGGVTKKDKKDKKKAHPPKADTKAESGSVVNGNAKVAVDASPSSAGDKTGADGKKSHGVKAGKKGAAAQPAPSAAPSGKGGDGPKASGAPSAVAVVASSYVAGSILSSLVASANVKGTSDTALSSAFVDTRPKEIVVSKAIIVAKPERPAKKTLDAYDQSDEDTEDDDPETGISKRLSHGNKRKADDGEVEKEILHSKRARRDMEASIAAAAEDAQNVHPLTKQKGRDLRDIEKEDIEEEMKDAAARAGKKKPLKEKKGAVAAQKGSGGSGASGDLGAAAGGEVGAVDAKEERAHRDSKEDDPERLQRTIFVGNLPVDTAKHPKAFKKLAATYGPVESVRFRSVALESPGSTVNRKAGLLGGKLHPDRDSINGYVVFETKEAATAALAMNGSVFNEKHLRVDNAGTPRVPDTTKSVFVGNLPFNAEDEQLYRLFSTCGRVTSVRVIRDSATNIGKGFGYVEFEDKGAVALALTMHGTKDETIGRELRVFRARRDAATHTKFRGEVAKKGTAAAIQRRLKTKKPPAVAAKKAAQGAAPKKVKSGGVTKKKTKVRSMDKAGRDRLGASKLAARAGKKSPKGQK* # PASA_UPDATE: g11924.t1, single gene model update, valid-1, status:[pasa:asmbl_6089,status:3], valid-1 NODE_345_length_26388_cov_41.6644 . gene 1479 3727 . + . ID=g11924;Name=g11924.t1 NODE_345_length_26388_cov_41.6644 . mRNA 1479 3727 . + . ID=g11924.t1;Parent=g11924;Name=g11924.t1 NODE_345_length_26388_cov_41.6644 . five_prime_UTR 1479 1685 . + . ID=g11924.t1.utr5p1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . exon 1479 1997 . + . ID=g11924.t1.exon1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . CDS 1686 1997 . + 0 ID=cds.g11924.t1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . exon 2180 2285 . + . ID=g11924.t1.exon2;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . CDS 2180 2285 . + 0 ID=cds.g11924.t1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . exon 2578 2795 . + . ID=g11924.t1.exon3;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . CDS 2578 2795 . + 2 ID=cds.g11924.t1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . exon 3123 3727 . + . ID=g11924.t1.exon4;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . CDS 3123 3251 . + 0 ID=cds.g11924.t1;Parent=g11924.t1 NODE_345_length_26388_cov_41.6644 . three_prime_UTR 3252 3727 . + . ID=g11924.t1.utr3p1;Parent=g11924.t1 #PROT g11924.t1 g11924 MNYDSITLNFWKEAVNREKRISLGWYLTHHADNAAASKKTSISKGAKRGSGSPSPVPAEDAASVAATADSNMSTWNNKTSYELSVILGRRKKAQEMHAQMMRQQAARLTTTDFEKMGALNDSRSPKHAMRKQNYGESCQSAKAVVNGLVEASNTYASDGTYYSTQTMKILPPTPFATRPASAKTQKLLYVGISAEGEGRAAYLKRRKEDGPQDKYMLPVLSNQSYGWEPYSPESPDKGRSKIVVDTFYRKNGVF* # ORIGINAL: g11925.t1 original gene structure, not modified by PASA NODE_345_length_26388_cov_41.6644 AUGUSTUS gene 4469 9767 . + . ID=g11925;Name=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS mRNA 4469 9767 . + . ID=g11925.t1;Parent=g11925;Name=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 4469 4983 . + . ID=g11925.t1.exon1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 4469 4983 . + 0 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 5206 5350 . + . ID=g11925.t1.exon2;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 5206 5350 . + 1 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 5740 6101 . + . ID=g11925.t1.exon3;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 5740 6101 . + 0 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 6524 6640 . + . ID=g11925.t1.exon4;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 6524 6640 . + 1 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 6791 7878 . + . ID=g11925.t1.exon5;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 6791 7878 . + 1 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 8099 9425 . + . ID=g11925.t1.exon6;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 8099 9425 . + 2 ID=cds.g11925.t1;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 9656 9767 . + . ID=g11925.t1.exon7;Parent=g11925.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 9656 9767 . + 1 ID=cds.g11925.t1;Parent=g11925.t1 #PROT g11925.t1 g11925 MAHNTALFTLCEDGVLEFGERVTQIAFSLEGTTVLGKGGLASCVPHSLLAIARAGSNASSVLAVKDILPSGEVGVAIAPSAGPPYNSLRHLAWRPRNLYALDEKQRSDAASTSVSPTADESPAYVACVDGSVRADLDGDDSLLLSSLDTQAIYDWAVDPTSGAVRELSHTTYHGYEPIDVSYSADGRMKCIILCNERESRVKVMRAVAGEERRTDASWEVIHTIAFPIAERCVKRSFFGRRNRSLTLVSMRISAQSSTAAPSGGEGRQRPRWRPRAVPVPTSTAGGRNALVELLIATEETEWVPVPVAVDRPCKLNFPFDWYAAISIDATGDLGVGASVVRRSFPGDLRVAAAGGYGTFYIMDPADPSSAVTCHPPLLSRKCSVAWSPCGGILAVAGLGIGLSAGDRDGATGAPSGHRLRHRRDTLDYSAADTCLQMHLYLYDRHGNALASVDLGANGRPSERCYVAWDWSLFSHASNGANVADPSFHADSKDSPNARIPYPFRMAIAQGTKVSIVTATDHRPYLSDLGALCPVAPRALCNDETSDVGYGADPSLHVSQVSFMHKQMRSLGITSSPSLGYADVNVELPLGRRFRAHRLFLSRSSVLAAALRGDVATPPEFASDFSVSVSDATDCDGGRVLTLSSRLRCFGNDAAVDLLLRFLYTDALPFDMFRDAMRWGCDQTGLSVTEDEGDCEDAFDRTVEDCVRLFTLLRLWPLPEALPDHLSRCLATSEWADVGIGSAGEVVLAHKAILCARSDYFRALLGSNMGHVVSPKDMTSSSSSDGGNSLCRAMAVECADARSFAAVVRFMYTDWAKFGSIRDVPVRTHAPETHSPLPQPLSAEDAWAAVADMHAPPPLRDRAQLAVAPSFICDVLSVHEHEHMDTDGGVHFDAALHGGSGSRGCTQMTAVQFARTDAFGSVVSAAVEVAEMLGLLDFVAQCIPLLSPHVDAANYAEFASFALTRGDHPEAGAMRSLMHTCDDVVRRDVAGCLASVLAVSSADACSEGSSSLLRELLDRIGRISWRKHLVGSADVDCVLSSLDGLETSAAAYAEGPMWDAALDGLVRAYDSHCETSLVIPAVGSAPPRALSPATAAAALLFCCADVRKTRRDSVSVEGTLDATGGMSVAVGGVGMRLQGVMCFEAKRASLAVHDDDDHCDMCRQQFGQLTRRKKWCRCCHRKICARCSKRTRAKVHRESLALVVDIRAHTACRSCAALASFL* # ORIGINAL: g11928.t1 original gene structure, not modified by PASA NODE_345_length_26388_cov_41.6644 AUGUSTUS gene 22306 25701 . - . ID=g11928;Name=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS mRNA 22306 25701 . - . ID=g11928.t1;Parent=g11928;Name=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 25534 25701 . - . ID=g11928.t1.exon1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 25534 25701 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 25239 25310 . - . ID=g11928.t1.exon2;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 25239 25310 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 24795 24915 . - . ID=g11928.t1.exon3;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 24795 24915 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 24208 24323 . - . ID=g11928.t1.exon4;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 24208 24323 . - 2 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 23537 23896 . - . ID=g11928.t1.exon5;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 23537 23896 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 23196 23258 . - . ID=g11928.t1.exon6;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 23196 23258 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 22306 22884 . - . ID=g11928.t1.exon7;Parent=g11928.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 22306 22884 . - 0 ID=cds.g11928.t1;Parent=g11928.t1 #PROT g11928.t1 g11928 MDPALTKLTEWHFGGHRLHMFSGATQTPGYVDLEADYADVDYGGGCIMWDILASQMQQPRQQKATVADDMDRSGGRLSLQSFLDSQPLSQLVFFKHPIVEIDSEAHIDAVLRRMQQHNVLSLPVYDAMRKKYDGLITVFDIVVFVSTTFFDILGAPVSQFTLRKLSRTPVRSLIGTADYFKAARWRENGLIVADLSLSILDLLRVMSLGTTHMIVKVYPDNERGIIPYGSLGDDAHESSEDSGLGMRAGDAEPAGGVSDERDRSDVGGGRSQNHRILSQVDALRFLCRNKALFANVFDKTIESLGLSQSLNGRHFVTCGLGARVLEVFRAMFLQDGGVAAIVSSVSPSANLPFDVSTPSASHGQLIATLSPSDIRGIRIDSLMDLQLTVESFLVARHSGQLPRPVCVGRNATLFDAAVAMLIAGVHRVWVIDDDSHPMSVVRTCDVITCLLHEAEREAMAQSADDSSAAVTRDTGSRHFKGPPMARTHLKEE* # ORIGINAL: g11927.t1 original gene structure, not modified by PASA NODE_345_length_26388_cov_41.6644 AUGUSTUS gene 13622 21868 . + . ID=g11927;Name=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS mRNA 13622 21868 . + . ID=g11927.t1;Parent=g11927;Name=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 13622 13720 . + . ID=g11927.t1.exon1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 13622 13720 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 14223 14321 . + . ID=g11927.t1.exon2;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 14223 14321 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 14429 14590 . + . ID=g11927.t1.exon3;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 14429 14590 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 14892 15275 . + . ID=g11927.t1.exon4;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 14892 15275 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 16036 16476 . + . ID=g11927.t1.exon5;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 16036 16476 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 16675 21273 . + . ID=g11927.t1.exon6;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 16675 21273 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS exon 21668 21868 . + . ID=g11927.t1.exon7;Parent=g11927.t1 NODE_345_length_26388_cov_41.6644 AUGUSTUS CDS 21668 21868 . + 0 ID=cds.g11927.t1;Parent=g11927.t1 #PROT g11927.t1 g11927 MSADVADALKRIEVPNVFVQQQASFDWIARNLIDSAATKGLWGLLSHTSPRIVSLACSGLYSLVRQGVVSWSSCVNGIADRIATAHCKCRGSVIDCLAKLVRDRALDTVTTVGSDGSREMTLSIADIFSLSPFHSSPSRKHPFVVAILACDDAWGAIAQHCDILLSTDEITSIVTTAPASRDGPLVPGDATQRRVAVFAAILPALRYFLLGGDNGIASSSACGLRATAERLLLRVCSDGDLPRDARAKAFDVVLAALRSSHFASVAASEWTVSLACTSWQWSHDYGDTSFRISLLDALLSLASEQRRPAFVGGDCNSLDARIIPLLSKCIRTCTPHLLSDADGSACTHSLAIRIPAHLSSHLAVAVGDEWSLLVDTIARFASAALLRAENSHNGAAVASLVLLQLRLCVFPLLQNIALTPNEQALAAIEAIESGTRQIHVMHTPPPHMPSSGCMRRLDSDSSVAAIVAELHAFAFASPSQGQRALDDCLEHISRAVARETKWRERSDPHSAVAVARTPVNATMPIPLILSFAASVLLYGEPSSCDAAVRTIGRMLACFENIALSVVPLVLRAVSSLSVTKLGASSGDTSGMAALDLLPLLATDRICASNAVRIISTMHAVPSLAPVALSLMLRAWDIQDRVFPHLEAIVCSTTYAPSRHRKRSDTSMSSFEWEVVRAECMRSVCSRKPAAGVGMIPHAALLIETYLDEVIRDEGIHARLAASAVAFAVDALGALCGHTLLDFGTVWRDLGKRLERLWMHGDGKKHGSVTLQTKALAAETQRGIDVVCASVCNAIGEAARAGQLSGEDRALLSAELMSVLWSVVLCFDAGRRYEWASLTRAAAADALCAFDGVSLGIEACIRESVVGNGTAAVAETDAATATAAESAPLMPPTPPSDFMSLLLSDADSEGGARLFSHAIALEVRSLPRSVLIGTSLGHVGGLPQSGVSSDALCRSAEAALKELSDSFSDSATPGIRLSAFAPSVLLASPLSTKKQLSSKWLTTMRSLLATAVASVDDWASLSVFVGGWTEFMRAVVASVVEGAKDEPPGTVLAQLDAVAVALVDAASSGGVSRINATAAVTGWACASSGVLKDTRFEANSECLCVSGGRDVSLTTTLELLLSLVDGSARTGSLLSRAVGTGARKAQAAEWGPRDSRGFVPSSCRCVAALCAGMVAAQLGEAEKVFVAEAIQALFAVAEKESTRDADVASHCIAGVGAVLSLSHLDYAFLGSFCEQLVSVGGLGVGRDGVSVTCAAWAAIGVVHGMTRGGHMRELEALAKQTCTACLDAESSGDAKRLSTLAIPAVILAEAAGMSRDSLGGLCEVLLSASASEGVSPPDADSVGSVSYALGRLAHWRDPALASSLSRQLQTALSTATTDGGSVVVVRCALLVGLCGASLVGGDARADTFMLSPDVRSSLAACIASVVRRISTPSTPNSLATTASWLICPAAAHATLSSNTPRESSTRSAGGKNKHGGNHLPADYAFLGAYSVLSCALSTVTAAIKADERSSGGAASTSAAARVLESLSSVERLPPVQLAGTLRSLFGDGRDRVIAAQCVSFAAKHVSTQPDALAFLNHLLGTCITPADGQTDVELHKWADHARRAVWRLGLPAAYTAVPERVAVPLLVRASAAALSFATNHSKEESNLPSFCEEMDAFIDGLWSLSPRSAEWGSDARREFFDAVGRCARLLFTLFPLSERDTSGNAGATVDDVVCKLTRMCASLPEAYSIDVLTAVAGEAVDVPVVQSLTMRCALAVTGAAVVAPADAISHVVKTFSFISDFEERNWDTVWRGALPVIGAAARAVVSLKHRHRILLDILSACAQCVARDSDTAAAILSASALVSLASVCASMWAGDVEVAAMLPCATLDGDSDDATADGDDDTGLRTPALSLPIASSASPLNSRSLGRLWIGPAFRSLFARAEWTPLAAQATERLVACVDSIASHRPTTDGKESKDVTSSLRATLIRGIVALHCARSASANGGGTSVDVLERTIDM* # PASA_UPDATE: g2991.t1, single gene model update, valid-1, status:[pasa:asmbl_7420,status:12], valid-1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . gene 2 1117 . - . ID=g2991;Name=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . mRNA 2 1117 . - . ID=g2991.t1;Parent=g2991;Name=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . five_prime_UTR 1114 1117 . - . ID=g2991.t1.utr5p1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . exon 928 1117 . - . ID=g2991.t1.exon1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . CDS 928 1113 . - 0 ID=cds.g2991.t1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . exon 649 778 . - . ID=g2991.t1.exon2;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . CDS 649 778 . - 0 ID=cds.g2991.t1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . exon 365 555 . - . ID=g2991.t1.exon3;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . CDS 365 555 . - 2 ID=cds.g2991.t1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . exon 2 239 . - . ID=g2991.t1.exon4;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . CDS 75 239 . - 0 ID=cds.g2991.t1;Parent=g2991.t1 NODE_4539_length_1483_cov_32.201_potentialcontaminant . three_prime_UTR 2 74 . - . ID=g2991.t1.utr3p1;Parent=g2991.t1 #PROT g2991.t1 g2991 MTNKFFRTLCFLRVDTFLKSVGFTRGCFGCGPSKFSRALGILCTIFPVLPDTIVEMICGKHKGAFDNRILAEAGEHEPGGTSFMNVFHWVQAVRSGKFTLYDYGTFGNMARYGASTPPAYNMSNLRDLSVPIALYYGGADDLADPKDVTELLIKLSPNTIAKLIPQYAHLDFVWADDAHKIMYPDILSIVGDWCTSGHIAGASHADHPMAGSVSSLNWENVEH* # ORIGINAL: g4795.t1 original gene structure, not modified by PASA NODE_1172_length_13390_cov_43.906 AUGUSTUS gene 195 3425 . + . ID=g4795;Name=g4795.t1 NODE_1172_length_13390_cov_43.906 AUGUSTUS mRNA 195 3425 . + . ID=g4795.t1;Parent=g4795;Name=g4795.t1 NODE_1172_length_13390_cov_43.906 AUGUSTUS exon 195 3425 . + . ID=g4795.t1.exon1;Parent=g4795.t1 NODE_1172_length_13390_cov_43.906 AUGUSTUS CDS 195 3425 . + 0 ID=cds.g4795.t1;Parent=g4795.t1 #PROT g4795.t1 g4795 MDKDILAAMAADFGAPLKHAPGALANGSSQPQRAPMLIEDMTPAAQRLRGSDDFIPVRSVDDDDEEDARQATKEAELAQKSMDARIDDYVSARTKQLNQATRERSNDETTWLALLDFQTEAVELAWTSRRKYAVDTIAVGGVSHMDAAMRRALADRRVAICERALEALPGSERLTLALLESAEDVWDSEQLSQKWGDAIFRHAHRPEVWEAYISFRQSRFTSFEFTSAVSAYEKALSTLSSIAEGRLGVAGGTAAATNVREKERMELAIVRLLARACDMMRQAGYGERAVACLQAVCEFSLFCPVGIDDPGKRLDRAKAFEVFWDSDCARVGEPGAVGWARWASGARDTHSREGGQITLPVAHGDEDEEGGGFHLGRRWVSVEAQRECADWTPWRPDASGTDEPADSDRMVLYDDVRGLLVPLRTPSARVALVMEMLRYAGFDPRCPDACASLFPAAAREATGQSLPPFVVASSDNWGRDATSRSDDFADGVGTGCVLLRSDPSRVKFAENVLSQCAAVLAQVRLTSVVSVELQLCVDDTKARRAAKALLKQPNFRNDLGMWSEMLRVEAIAGNVDSCRSMAAQLLATCDQLGDAASLDLVAHVVRRFCECETRVLSMDAVDSKRLLRDAANRAGVALQMDAEGMADPSRVLKRARGRNSAGDPGDLYTQPALYGRSPLAPLLDAGVKARCLAALCCLAIRDFGTGFTPVLASLVGSSSAAISVAPAATRIARARRILAAALERPGQASAAVWVPSVDIAACLAFIDLLASDSTKAVASFSSAVDAVSPVALVPHAAFLSSMSSTSVVVPPAAGIKAAASTRTPDVPSFESVDPADAVRARADTEQLYLSYARFCRSLARGGALSPASLRACLVRCIAMFPGNGELLAMFIESEAAQRASGRLRRHFDARAGLYDGPVAWHSALAAECALGGSPHRVRSVFERALEESADRSVRSCVALWRLYICFEATGTIAGVGKIAGSGGADWDSAGSFERMRAVFFRALQRCPWAKGLYVDAVRYALYRDEGVHELIDMMVEKGLRVRAHLEEIEDADRSNQGADDAEDSNNDYDNDSGNNA* # PASA_UPDATE: g4797.t1, single gene model update, valid-1, status:[pasa:asmbl_641,status:3], valid-1 NODE_1172_length_13390_cov_43.906 . gene 6771 9927 . + . ID=g4797;Name=g4797.t1 NODE_1172_length_13390_cov_43.906 . mRNA 6771 9927 . + . ID=g4797.t1;Parent=g4797;Name=g4797.t1 NODE_1172_length_13390_cov_43.906 . five_prime_UTR 6771 6801 . + . ID=g4797.t1.utr5p1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . five_prime_UTR 6865 7076 . + . ID=g4797.t1.utr5p2;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 6771 6801 . + . ID=g4797.t1.exon1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 6865 7161 . + . ID=g4797.t1.exon2;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 7077 7161 . + 0 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 7258 7454 . + . ID=g4797.t1.exon3;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 7258 7454 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 7553 7612 . + . ID=g4797.t1.exon4;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 7553 7612 . + 0 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 7790 8002 . + . ID=g4797.t1.exon5;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 7790 8002 . + 0 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 8098 8215 . + . ID=g4797.t1.exon6;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 8098 8215 . + 0 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 8297 8354 . + . ID=g4797.t1.exon7;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 8297 8354 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 8481 8527 . + . ID=g4797.t1.exon8;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 8481 8527 . + 1 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 8630 8923 . + . ID=g4797.t1.exon9;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 8630 8923 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 9041 9343 . + . ID=g4797.t1.exon10;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 9041 9343 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 9457 9585 . + . ID=g4797.t1.exon11;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 9457 9585 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . exon 9681 9927 . + . ID=g4797.t1.exon12;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . CDS 9681 9877 . + 2 ID=cds.g4797.t1;Parent=g4797.t1 NODE_1172_length_13390_cov_43.906 . three_prime_UTR 9878 9927 . + . ID=g4797.t1.utr3p1;Parent=g4797.t1 #PROT g4797.t1 g4797 MASVQELASSVETKCASVIELHRKLRIIATKNEGRHEAALDALRQAVEIVAANREELETRSKALVDLRVTLQCKETDLKAANKAIADLELRVEKLVAEVAQSERTIDNLVEEVKTTHETMRRLNAQVAEQAKSAVIGSNTLMRLQAELDAAGDRERDHEQRARDETERHLSVEAQLRQTISHLNRDMDELRRLSDAVTRAKDEMVAAFEAERRMSADLRRTLTRARNDLEEAKKEERQAAPSRKETPIAAEDDFSMDFHANGTTAKRGGRARGAKTATRGRGGPRAKAASRAVDPPIDWDRDVPDSQASITGSAPQKAPEAAPVVDPPVSKRPPPQVPKLRALPLISVRPQKELSFKETAKAPACVVVKVPPPMKPVVCDDDDPFAFADNDVFLADAAMEAAEKSVDPHLFDSPPPSPSNVRAQSQPEVTRTPTPTLAESAAKVISASTQPPCDDAVDTNGGATTMPRADSEESLHFGDQIAPSSVAATHHSARNNSKRSFGDRGSPVQNTPFLRNCDGQAGDSECNGVLIGESIPQSATGASSGGVPVMMVQSPAKRARVQADAE* # PASA_UPDATE: g4798.t1, single gene model update, valid-1, status:[pasa:asmbl_642,status:12], valid-1 NODE_1172_length_13390_cov_43.906 . gene 10115 13275 . + . ID=g4798;Name=g4798.t1 NODE_1172_length_13390_cov_43.906 . mRNA 10115 13275 . + . ID=g4798.t1;Parent=g4798;Name=g4798.t1 NODE_1172_length_13390_cov_43.906 . five_prime_UTR 10115 10166 . + . ID=g4798.t1.utr5p1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 10115 10393 . + . ID=g4798.t1.exon1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 10167 10393 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 10515 10629 . + . ID=g4798.t1.exon2;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 10515 10629 . + 1 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 10762 10811 . + . ID=g4798.t1.exon3;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 10762 10811 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 10935 11568 . + . ID=g4798.t1.exon4;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 10935 11568 . + 1 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 11937 12068 . + . ID=g4798.t1.exon5;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 11937 12068 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 12198 12260 . + . ID=g4798.t1.exon6;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 12198 12260 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 12487 12603 . + . ID=g4798.t1.exon7;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 12487 12603 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 12847 12912 . + . ID=g4798.t1.exon8;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 12847 12912 . + 0 ID=cds.g4798.t1;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . exon 13160 13275 . + . ID=g4798.t1.exon9;Parent=g4798.t1 NODE_1172_length_13390_cov_43.906 . CDS 13160 13275 . + 0 ID=cds.g4798.t1;Parent=g4798.t1;3_prime_partial=true #PROT g4798.t1 g4798 MASELCGDGVRGSMEGIENAPSTAAEAVDAVAAAPTDADADAEMEEDVYAETEVTGTDATTTRVKVRPGYASIKSEFLKVLPEKRKADDDGNEAAKRPRVQIADRHSLKKKKMKGLCNSILRGNKCNFAENCRYSHNLDDYLAAKLPDLGPTCINFEKFGKCPYGLQCRFSGAHTDADKNTIVDEAKIAQRKTEKPEVMNVMQKDFLNRLRKRQLDLPRSQEFSNALAERLRLLKIHTDGLEKGKKAAGGAGDAPASQPTTDSVAKTEAAEGEQGAEVGGDVETDVADAVVDATVGVGAKTTTEAEVVPAGVALPSNTPVKDWDAVFTEEMNIRFRPMEKKKIDFSGKLYLAPLTTVGNLPFRRVCKKLGVDITCGEMALATNVLQAQQSEWSLLKRHHTEDIFGVQLCGAFADQMSRCAEVVAKYTDVDFVDINCGCPIDLVYKKGAGSALLERQTRLEQIVKGMNYALGEIPLTIKIRTGVHNNSWNAHKLIPKLRDWGVSLIT # PASA_UPDATE: g4796.t1, single gene model update, valid-1, status:[pasa:asmbl_643,status:3], valid-1 NODE_1172_length_13390_cov_43.906 . gene 3509 5445 . - . ID=g4796;Name=g4796.t1 NODE_1172_length_13390_cov_43.906 . mRNA 3509 5445 . - . ID=g4796.t1;Parent=g4796;Name=g4796.t1 NODE_1172_length_13390_cov_43.906 . five_prime_UTR 5332 5445 . - . ID=g4796.t1.utr5p1;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . exon 5316 5445 . - . ID=g4796.t1.exon1;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . CDS 5316 5331 . - 0 ID=cds.g4796.t1;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . exon 4174 4555 . - . ID=g4796.t1.exon2;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . CDS 4174 4555 . - 2 ID=cds.g4796.t1;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . exon 3509 3960 . - . ID=g4796.t1.exon3;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . CDS 3783 3960 . - 1 ID=cds.g4796.t1;Parent=g4796.t1 NODE_1172_length_13390_cov_43.906 . three_prime_UTR 3509 3782 . - . ID=g4796.t1.utr3p1;Parent=g4796.t1 #PROT g4796.t1 g4796 MPLPVCSKTYKVPRRPFEKERLDHELKLLGEYGLRNKHEVWRVQYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDESRMKLDYVLGLQIQDLLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVGKQVVNVPSFIVRLDSQKHIDFSLNSPYGGGRAGRVKRKSSKKSTGGDGEAAEEDAE* # ORIGINAL: g12989.t1 original gene structure, not modified by PASA NODE_2687_length_5447_cov_42.1245 AUGUSTUS gene 202 3331 . - . ID=g12989;Name=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS mRNA 202 3331 . - . ID=g12989.t1;Parent=g12989;Name=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 3263 3331 . - . ID=g12989.t1.exon1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 3263 3331 . - 0 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 2805 3029 . - . ID=g12989.t1.exon2;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 2805 3029 . - 0 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 2662 2713 . - . ID=g12989.t1.exon3;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 2662 2713 . - 0 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 2307 2477 . - . ID=g12989.t1.exon4;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 2307 2477 . - 2 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 1923 2141 . - . ID=g12989.t1.exon5;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 1923 2141 . - 2 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 1404 1817 . - . ID=g12989.t1.exon6;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 1404 1817 . - 2 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 681 1233 . - . ID=g12989.t1.exon7;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 681 1233 . - 2 ID=cds.g12989.t1;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS exon 202 562 . - . ID=g12989.t1.exon8;Parent=g12989.t1 NODE_2687_length_5447_cov_42.1245 AUGUSTUS CDS 202 562 . - 1 ID=cds.g12989.t1;Parent=g12989.t1 #PROT g12989.t1 g12989 MEAKVDLEDILQDVTRDQVTKRREALRLLFEKLETRTALMSIDRDSDSFLSGTDGGSHSGGDPFHVGVTWRGILEAVQSAMRKDGEQFAKSKTAKSKSAQAVGGELRRLLKMADGRGPRLHSCMKEVVRHIRSQIASPTTCDAFMVNYTGALVDSVLSVPAYVAALDRESWSQILKLYTELAVPTATTQTSFVGGSVRPSAARAVYLCITNAPAAFVRDHTEPLFKFFGEFKPSEVAAEHAIAASLLGACNAFLREVAPDSPAEILSLGSTMSPVLLLETIWSTRVSLLKEEICQFFRIQFCARPGPSDSTTRFAFVDLLYDRMLSDHAPRAINLFSRARQAIGQERVKVEYSRRCHLELAADLFWEWQRPANTSEDISGERDGGGKRRRVGTVMEEMIERLCTSAVDRAAPAPWLQVYSAVLSKYPQLLCCDAGTGSAKGLPSTKSAAAQANLHRNALKSVRGIIPFFEQGGDSWETEHWLCRCLSTVLASFRKMAVDAAVPGELSSVVIVVFTHVLRRAATRVLSDGCYRFLTDVIATGWISSECCKSLCDDIWTAVSTAVSKPTRGSLEFVLAILSDSTASAAMDRGPRLSALVSRCLGGADGAAGSLWSLRDVHGGDEPAGWTITHLAALVLASCCGRTPTQASFPLSKTPFLNADSQTLTERQEFVESSLHEIAGICDLSLSL # PASA_UPDATE: g12990.t1, single gene model update, valid-1, status:[pasa:asmbl_4803,status:12], valid-1 NODE_2687_length_5447_cov_42.1245 . gene 4069 5447 . - . ID=g12990;Name=g12990.t1 NODE_2687_length_5447_cov_42.1245 . mRNA 4069 5447 . - . ID=g12990.t1;Parent=g12990;Name=g12990.t1 NODE_2687_length_5447_cov_42.1245 . exon 5142 5447 . - . ID=g12990.t1.exon1;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . CDS 5142 5447 . - 0 ID=cds.g12990.t1;Parent=g12990.t1;5_prime_partial=true NODE_2687_length_5447_cov_42.1245 . exon 4830 4922 . - . ID=g12990.t1.exon2;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . CDS 4830 4922 . - 0 ID=cds.g12990.t1;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . exon 4463 4621 . - . ID=g12990.t1.exon3;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . CDS 4463 4621 . - 0 ID=cds.g12990.t1;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . exon 4069 4256 . - . ID=g12990.t1.exon4;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . CDS 4176 4256 . - 0 ID=cds.g12990.t1;Parent=g12990.t1 NODE_2687_length_5447_cov_42.1245 . three_prime_UTR 4069 4175 . - . ID=g12990.t1.utr3p1;Parent=g12990.t1 #PROT g12990.t1 g12990 PPLPIPTPYLYRISQVTPVLTQGATSVTGAFPTGVWYDYYTGAAIVNNSTASKSVSLPAAIDHLPLHVRGGFILPLQDPKGALNTKGARTKPYQLLVALSDSGASGSLYWDEGDGLDTISSGKFVVTNYVATVATTSGSLQSTPQSSYAPFSQLHYDSVRILGAKCPTTVAVNGASVSFTFDAANRALTIANLSLGMDAPFSLTWTDAGIHC* # ORIGINAL: g6076.t1 original gene structure, not modified by PASA NODE_3431_length_3476_cov_40.0385 AUGUSTUS gene 1518 3019 . - . ID=g6076;Name=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS mRNA 1518 3019 . - . ID=g6076.t1;Parent=g6076;Name=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS exon 2883 3019 . - . ID=g6076.t1.exon1;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS CDS 2883 3019 . - 0 ID=cds.g6076.t1;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS exon 2200 2628 . - . ID=g6076.t1.exon2;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS CDS 2200 2628 . - 1 ID=cds.g6076.t1;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS exon 1942 2041 . - . ID=g6076.t1.exon3;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS CDS 1942 2041 . - 1 ID=cds.g6076.t1;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS exon 1518 1781 . - . ID=g6076.t1.exon4;Parent=g6076.t1 NODE_3431_length_3476_cov_40.0385 AUGUSTUS CDS 1518 1781 . - 0 ID=cds.g6076.t1;Parent=g6076.t1 #PROT g6076.t1 g6076 MSDLMILLSALAVSCVVGFGTAMGLFDWVSTFFGGHGVAESHKRSRSDSERSGEDARSDDAVSEELNEELNAGPEDAVVEGADNHSGPPSTTLEPTRQQPPASNPKKQKKKAPKVDKDKDKDKDKGKASAGRGSIFESFFSSADQRAHATPPSSERVLGGGGYSQASAQQLHSKRLVSINDMLIWTEKSPCFVDFDGDIANEFYEEVPGGLKRITRAYLKPEGTVKLGHPRLSSLYPSVFFVPQSDNDAPHVVSGLGPRPYGQAQTPQAQGQTSSSTASTASNSPSTNTPPATTKGDKQSRRRGKSGRR* # PASA_UPDATE: g6075.t1, single gene model update, valid-1, status:[pasa:asmbl_6062,status:12], valid-1 NODE_3431_length_3476_cov_40.0385 . gene 105 1165 . + . ID=g6075;Name=g6075.t1 NODE_3431_length_3476_cov_40.0385 . mRNA 105 1165 . + . ID=g6075.t1;Parent=g6075;Name=g6075.t1 NODE_3431_length_3476_cov_40.0385 . five_prime_UTR 105 105 . + . ID=g6075.t1.utr5p1;Parent=g6075.t1 NODE_3431_length_3476_cov_40.0385 . exon 105 276 . + . ID=g6075.t1.exon1;Parent=g6075.t1 NODE_3431_length_3476_cov_40.0385 . CDS 106 276 . + 0 ID=cds.g6075.t1;Parent=g6075.t1;5_prime_partial=true NODE_3431_length_3476_cov_40.0385 . exon 442 1165 . + . ID=g6075.t1.exon2;Parent=g6075.t1 NODE_3431_length_3476_cov_40.0385 . CDS 442 882 . + 0 ID=cds.g6075.t1;Parent=g6075.t1 NODE_3431_length_3476_cov_40.0385 . three_prime_UTR 883 1165 . + . ID=g6075.t1.utr3p1;Parent=g6075.t1 #PROT g6075.t1 g6075 VGLANYAAAYATGLLLARRVLTKLNLADTYKGVEEVTGEEYHVAADGDKRPFRAFLDVGLARTTTGARVFGALKGAVDGGIDIPHSTKRFPGFDREKKAYDAETHRDRIFGKHVADFMAELAEEDEETYKRQFSQYIKAGVTADKIEDLYKAAHDKIRADPTHKPTTKKSAEKKNFGKKRLSLQQRKDRVKQLKAAHLRAKAE* # ORIGINAL: g8982.t1 original gene structure, not modified by PASA NODE_1143_length_13598_cov_38.0925 AUGUSTUS gene 8110 10043 . - . ID=g8982;Name=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS mRNA 8110 10043 . - . ID=g8982.t1;Parent=g8982;Name=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 9726 10043 . - . ID=g8982.t1.exon1;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 9726 10043 . - 0 ID=cds.g8982.t1;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 9455 9502 . - . ID=g8982.t1.exon2;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 9455 9502 . - 0 ID=cds.g8982.t1;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 8828 8968 . - . ID=g8982.t1.exon3;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 8828 8968 . - 0 ID=cds.g8982.t1;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 8110 8313 . - . ID=g8982.t1.exon4;Parent=g8982.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 8110 8313 . - 0 ID=cds.g8982.t1;Parent=g8982.t1 #PROT g8982.t1 g8982 MHLMRACRISVARCATNNIAANTVCITPAVNVRLPSRNVHGTAICGRSIVEILRDDHRRVKGMFERFNSASGPDAIAEQEKIAQDVVIEMSKHDWLEREYLYPTLKQWDLNLQQHCLDAHEEVTNDLVAVHRMQNTDLKRNQSSLEELKRLVNRVYSEFKAHVAEEEGEVFPMCEKKLSAAQLDDLGNKLTSARDVAPTRPHPTTPREPPGSTVVGRAAGMMDRAMDKLQSRDQRQ* # ORIGINAL: g8981.t1 original gene structure, not modified by PASA NODE_1143_length_13598_cov_38.0925 AUGUSTUS gene 5975 7496 . + . ID=g8981;Name=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS mRNA 5975 7496 . + . ID=g8981.t1;Parent=g8981;Name=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 5975 5980 . + . ID=g8981.t1.exon1;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 5975 5980 . + 0 ID=cds.g8981.t1;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 6450 6572 . + . ID=g8981.t1.exon2;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 6450 6572 . + 0 ID=cds.g8981.t1;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 6846 6990 . + . ID=g8981.t1.exon3;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 6846 6990 . + 0 ID=cds.g8981.t1;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 7357 7496 . + . ID=g8981.t1.exon4;Parent=g8981.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 7357 7496 . + 2 ID=cds.g8981.t1;Parent=g8981.t1 #PROT g8981.t1 g8981 MKLSYLATHNVRRAILTRNAPFAVDHFIERLGSADAYGGHFETIVTREFTPVKPDPAPIRHICEQWGLSTENVVMVGDYKDDVLCGHRAGSVTVLLNASYNKAYHPLPDVVIDRLVDIVDMFERGFEVDRPRQLPHV* # ORIGINAL: g8983.t1 original gene structure, not modified by PASA NODE_1143_length_13598_cov_38.0925 AUGUSTUS gene 11431 13499 . + . ID=g8983;Name=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS mRNA 11431 13499 . + . ID=g8983.t1;Parent=g8983;Name=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 11431 11492 . + . ID=g8983.t1.exon1;Parent=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 11431 11492 . + 0 ID=cds.g8983.t1;Parent=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 11698 13383 . + . ID=g8983.t1.exon2;Parent=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 11698 13383 . + 1 ID=cds.g8983.t1;Parent=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 13475 13499 . + . ID=g8983.t1.exon3;Parent=g8983.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 13475 13499 . + 1 ID=cds.g8983.t1;Parent=g8983.t1 #PROT g8983.t1 g8983 MSLFAHLAQNEHTLMHLLDTSGIGLAVHLARHEDPSLRASCACAVAAVVGTPCPLALSRLVATAQNNRTHVTGGVFAYIDTLVHDTCATVVTKSRALIASILSSQFFLSTYGASLATDAEHALCAWLASERCEDQPTQNDKHVKSPHSAIATLDGLTDAIRLNAAVAAQWMTLPGVLPAVVALLFSVERTVRYRAVHCVCALFELGWVTSGHNDTDGNSGSDITRAWWTPLGCLPTNPLGVYPIALTWIESLFRRTPDGDRGPTTALQLCAGLSRAGSARDRLPPGWWAPSMGAALAVAMTGSHVDASTARVFACGGGDGGGVCVNEENTFARVLSMLRAAATSASRTSRDDALSASLSAAASLAESPHPAVSSALVNGGWLDALMSVCTVSASCSSLPGRRTTLALVSVVRALAAAGCRSWTHMDNAEAKRLSAVRGLLKVLLKTAANALRIGMDADITHVTAVVGVLIDLLRSRDAAIVACVLDDVTTCDDDGVGCSVTHTVAQIAKACAVDSRWEVRDSGLCLLASLAQCACAVPVDDVTCVGATCMPREERDAAKCATHIIVGERLYLLAMSLLDDQEACEYAAVY* # ORIGINAL: g8979.t1 original gene structure, not modified by PASA NODE_1143_length_13598_cov_38.0925 AUGUSTUS gene 73 3464 . - . ID=g8979;Name=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS mRNA 73 3464 . - . ID=g8979.t1;Parent=g8979;Name=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 3108 3464 . - . ID=g8979.t1.exon1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 3108 3464 . - 0 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 2534 2838 . - . ID=g8979.t1.exon2;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 2534 2838 . - 0 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 2164 2351 . - . ID=g8979.t1.exon3;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 2164 2351 . - 1 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 1775 1852 . - . ID=g8979.t1.exon4;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 1775 1852 . - 2 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 1474 1649 . - . ID=g8979.t1.exon5;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 1474 1649 . - 2 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 1100 1199 . - . ID=g8979.t1.exon6;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 1100 1199 . - 0 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 613 660 . - . ID=g8979.t1.exon7;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 613 660 . - 2 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 312 409 . - . ID=g8979.t1.exon8;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 312 409 . - 2 ID=cds.g8979.t1;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 73 166 . - . ID=g8979.t1.exon9;Parent=g8979.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 73 166 . - 0 ID=cds.g8979.t1;Parent=g8979.t1 #PROT g8979.t1 g8979 MAFRMGFGKPPGPPKRKLEEDDDEDDAIMRKMRKVPPASTLNAPAASTASTLPALAAVKQKDSNRDYFDDDEEEEGSAPQAPAVRANATDKSAADEEEEEEDPLDAFMANIKEEDNKPKARRDDIEDEDDQESYFKKRKEQLKQDAINAANNPNASDDEDVQYDDDDNPIAPEKKPGPDFIEALPPIDHSLITYPEIRKNFYDEHLEILTLDAEKVEEMRRTFGMRVSGADVPRPCLSFAHFGFDESLMSVIRKCEYTTPTPIQCQAVPAAMSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQPELAAGDGPIGIVCAPTRELCQQIYNEARRFGKAYGLRVVAVYGGESMWEQTKALSDQCEIVVATPGRLIDLIKRKAVSMTRASYLVLDEADRMFDMGFEPQVWSIVNQIRPDRQTLLFSATFKRSVERLAREVLTDPIRIAIGDVGEANQDITQIAQVLRSEEDKWPWLMAHLVEFTS # ORIGINAL: g8980.t1 original gene structure, not modified by PASA NODE_1143_length_13598_cov_38.0925 AUGUSTUS gene 3927 4948 . - . ID=g8980;Name=g8980.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS mRNA 3927 4948 . - . ID=g8980.t1;Parent=g8980;Name=g8980.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 4582 4948 . - . ID=g8980.t1.exon1;Parent=g8980.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 4582 4948 . - 0 ID=cds.g8980.t1;Parent=g8980.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS exon 3927 4204 . - . ID=g8980.t1.exon2;Parent=g8980.t1 NODE_1143_length_13598_cov_38.0925 AUGUSTUS CDS 3927 4204 . - 2 ID=cds.g8980.t1;Parent=g8980.t1 #PROT g8980.t1 g8980 MVCGIKAELAAPPVSAPSHGFFVVNVTLPPMSGSKFRPGPPSEFAQSMSQMLHRLAVDGRLVDLVSLGIVPGELAWSLYVDVYCVAYDGNVLDTAALAMSAAVSDLKLPPIGIDGGRPARLEGDAQRLSIVRPVFSLTFRAVDNSILFADPTDEEESLDGCSLTIAFASDGRMCGLHKMGGSLLSKAALDDCIVHARTRALECERLLAAAIAAR* # ORIGINAL: g1619.t1 original gene structure, not modified by PASA NODE_1821_length_9061_cov_37.8291 AUGUSTUS gene 6720 8983 . - . ID=g1619;Name=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS mRNA 6720 8983 . - . ID=g1619.t1;Parent=g1619;Name=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 8487 8983 . - . ID=g1619.t1.exon1;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 8487 8983 . - 0 ID=cds.g1619.t1;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 7868 7991 . - . ID=g1619.t1.exon2;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 7868 7991 . - 1 ID=cds.g1619.t1;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 7554 7613 . - . ID=g1619.t1.exon3;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 7554 7613 . - 0 ID=cds.g1619.t1;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 7081 7182 . - . ID=g1619.t1.exon4;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 7081 7182 . - 0 ID=cds.g1619.t1;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 6720 6893 . - . ID=g1619.t1.exon5;Parent=g1619.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 6720 6893 . - 0 ID=cds.g1619.t1;Parent=g1619.t1 #PROT g1619.t1 g1619 SASPIEHNLEKLAAILERDIPTQRSKVIESIVTCVAELPERTGIYTTLVALLSAHNYEFGEAVIDSAVAHIEEFLRVHDYHRAKLTVRFLVDLLNVNLVVPGSVVTVFESLLSPITELETRPVPQNRTDAYAAIVLWSLPFVGRDLHRRKAAELDHIMEVIGAYIKKRRRDAFACLRIWSGGSPLPQDESLELLFNQVARLKDERWQERVIPRPYIAFDDILREIVQHTIPRISVPDHSADAVYPLPRITMRLFDEYDTIQDPLMPPHLSFERHYLEDVISDMVHFYEPNRKFCISSLFALPGAAHFPLPHIVVEVSV* # ORIGINAL: g1616.t1 original gene structure, not modified by PASA NODE_1821_length_9061_cov_37.8291 AUGUSTUS gene 172 453 . - . ID=g1616;Name=g1616.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS mRNA 172 453 . - . ID=g1616.t1;Parent=g1616;Name=g1616.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS exon 172 453 . - . ID=g1616.t1.exon1;Parent=g1616.t1 NODE_1821_length_9061_cov_37.8291 AUGUSTUS CDS 172 453 . - 0 ID=cds.g1616.t1;Parent=g1616.t1 #PROT g1616.t1 g1616 MSGTLHSTATACGRFRAGSVPVSPSATSEGKMHHDHHWHSSMRAMPEAKGAVGGSGWRAWLEESLLWRMVKYARPDYKYFAPAMLLLFVEAAAA # PASA_UPDATE: g1618.t1, single gene model update, valid-1, status:[pasa:asmbl_2714,status:12], valid-1 NODE_1821_length_9061_cov_37.8291 . gene 2184 5977 . - . ID=g1618;Name=g1618.t1 NODE_1821_length_9061_cov_37.8291 . mRNA 2184 5977 . - . ID=g1618.t1;Parent=g1618;Name=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 5844 5977 . - . ID=g1618.t1.exon1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 5844 5977 . - 0 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 5549 5623 . - . ID=g1618.t1.exon2;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 5549 5623 . - 1 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 5108 5211 . - . ID=g1618.t1.exon3;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 5108 5211 . - 1 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 4317 4782 . - . ID=g1618.t1.exon4;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 4317 4782 . - 2 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 4063 4156 . - . ID=g1618.t1.exon5;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 4063 4156 . - 1 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 3749 3852 . - . ID=g1618.t1.exon6;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 3749 3852 . - 0 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 3262 3391 . - . ID=g1618.t1.exon7;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 3262 3391 . - 1 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 2894 2989 . - . ID=g1618.t1.exon8;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 2894 2989 . - 0 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 2467 2613 . - . ID=g1618.t1.exon9;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 2467 2613 . - 0 ID=cds.g1618.t1;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . exon 2184 2300 . - . ID=g1618.t1.exon10;Parent=g1618.t1 NODE_1821_length_9061_cov_37.8291 . CDS 2184 2300 . - 0 ID=cds.g1618.t1;Parent=g1618.t1 #PROT g1618.t1 g1618 MHLPIAIELLYERVEAMDVECVDRFATWLSHHLSNFEFKWTWAEWNDILGEPAHNTKPLFFTELVNKCIRLSFYERMKALVPETFASVMPPEPKDNYMFADPTQQSEGSATALRLRDVFKAKGSSARVASLLSALARGEDRGNPSSKSGTDNMDTDNNNNNNNADDVKNESGVDQAQEKSNDVTMTDAAAAPLTSVKTGDGTNGSVVFAEPADPADFNVFAGVDGPVSDETVALVTRVFVHAVLNFGSVSYTHVVSLVERYMLVLRQLATAASTRIHIARAVAEYYKNRSQMCVILFDKLLAYGILDNAAVTNWLFSDDVLETLTASHPWEILAISLDKMIARTRHVRTVLDRVQQGGVAAIDDSSRRESLGAQEPTVESVSETMEVVAREQKEAFLVVFQRLVMALSDHIHKLDEANTADGAGLNDTATLEGDHWYRAVSGYMLSIGRKYHDAIKGFMLTLETLVFTDDVDPRILNTFNKIMALRQE* # PASA_UPDATE: g1617.t1, single gene model update, valid-1, status:[pasa:asmbl_2713,status:12], valid-1 NODE_1821_length_9061_cov_37.8291 . gene 640 1609 . - . ID=g1617;Name=g1617.t1 NODE_1821_length_9061_cov_37.8291 . mRNA 640 1609 . - . ID=g1617.t1;Parent=g1617;Name=g1617.t1 NODE_1821_length_9061_cov_37.8291 . five_prime_UTR 1311 1609 . - . ID=g1617.t1.utr5p1;Parent=g1617.t1 NODE_1821_length_9061_cov_37.8291 . exon 640 1609 . - . ID=g1617.t1.exon1;Parent=g1617.t1 NODE_1821_length_9061_cov_37.8291 . CDS 1020 1310 . - 0 ID=cds.g1617.t1;Parent=g1617.t1 NODE_1821_length_9061_cov_37.8291 . three_prime_UTR 640 1019 . - . ID=g1617.t1.utr3p1;Parent=g1617.t1 #PROT g1617.t1 g1617 MSAPPSYTYAAQPSYQYGQPAYAQNGAYGGAPTQQAYAQQPVYYAAAPAQNVYYVQQQPVQREVVVVSDDRAAAEEECCLIALCTATLCLCCALSN* # ORIGINAL: g9114.t1 original gene structure, not modified by PASA NODE_2347_length_6622_cov_40.9733 AUGUSTUS gene 2856 5379 . - . ID=g9114;Name=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS mRNA 2856 5379 . - . ID=g9114.t1;Parent=g9114;Name=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 4817 5379 . - . ID=g9114.t1.exon1;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 4817 5379 . - 0 ID=cds.g9114.t1;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 4512 4569 . - . ID=g9114.t1.exon2;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 4512 4569 . - 1 ID=cds.g9114.t1;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 4193 4256 . - . ID=g9114.t1.exon3;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 4193 4256 . - 0 ID=cds.g9114.t1;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 3282 4009 . - . ID=g9114.t1.exon4;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 3282 4009 . - 2 ID=cds.g9114.t1;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 2856 2942 . - . ID=g9114.t1.exon5;Parent=g9114.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 2856 2942 . - 0 ID=cds.g9114.t1;Parent=g9114.t1 #PROT g9114.t1 g9114 MRNKNNGSMPRATLLFVVLCGVHIAHANKDDGLRCNHKSSVVIVGAGLSGLMAAKQLSESGISDFVIVEALPQIGGRMRQGRFGDIFVEKGANWAQPGSPANPIVQLVRAANLTGDRSDYRNCSVYMGGKGRLYDSIQSIPWAAQFDAVAEAAHKDGLRRLKEGLPDMSTRVAFARQGWDGGAANSKEDALRKAYEWYNHDFEWADPPEVNSLEGAWTHLSRSELDPTDAYQDFFVQDQRGVRHMAVYIASSFLARGTGDTEFDDPRLFLNTPINEISHTDAGVAVATADGETFCGDYALVTVSVGVLKSDQITWSPALPEWKLDAIFRFDMALYMKIFLKFETKFWRDGEQFFLNADSRRGYYTLWQDVNWNGNLGEGLNALMVTLTSSEAQRAETLTDEQIIEEAVGVLQSLFMDVDVPRPTAWMIPRWLADPYARGSYSNWPLGMSQEQHEQLKAPLGRVHFAGEHMERKHFGYMQGAYYTGVKQGNALAALITSA* # ORIGINAL: g9113.t1 original gene structure, not modified by PASA NODE_2347_length_6622_cov_40.9733 AUGUSTUS gene 1 1967 . - . ID=g9113;Name=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS mRNA 1 1967 . - . ID=g9113.t1;Parent=g9113;Name=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 1940 1967 . - . ID=g9113.t1.exon1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 1940 1967 . - 0 ID=cds.g9113.t1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 1611 1774 . - . ID=g9113.t1.exon2;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 1611 1774 . - 2 ID=cds.g9113.t1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 1428 1480 . - . ID=g9113.t1.exon3;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 1428 1480 . - 0 ID=cds.g9113.t1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 1100 1211 . - . ID=g9113.t1.exon4;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 1100 1211 . - 1 ID=cds.g9113.t1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 719 826 . - . ID=g9113.t1.exon5;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 719 826 . - 0 ID=cds.g9113.t1;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS exon 1 531 . - . ID=g9113.t1.exon6;Parent=g9113.t1 NODE_2347_length_6622_cov_40.9733 AUGUSTUS CDS 1 531 . - 0 ID=cds.g9113.t1;Parent=g9113.t1 #PROT g9113.t1 g9113 MPGEVFKVPVPLVAAREEESCQQIIASLVQLEHVANDIFGRIATRLAYQREQLKTVSDKILTARARVQKIRGSTKATTVFSSAKYPAAARLDDYRTVFGEKTPGLDEVRFQSYPVTTSVGKLDESGIKDKSMFFATNFSKAKEKQKISADEEMGEGLGALPKTVDAVNSLLLFNTSENPYKNYVTLDPLSGSIKKTRDMMVEETRKLGAAPKSILEGDELARFGTETYFYNPGMGVVPDIEVPAMLPDLPGVADISWNADAGMSIAPSILGPNMPDLPMLPEGDGMTPTPSARQPTMQHSQRAPPPSGPGAPPPSMSSSAAAPPPPPPSSAP # ORIGINAL: g2544.t1 original gene structure, not modified by PASA NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS gene 2590 4223 . + . ID=g2544;Name=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS mRNA 2590 4223 . + . ID=g2544.t1;Parent=g2544;Name=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS exon 2590 2871 . + . ID=g2544.t1.exon1;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS CDS 2590 2871 . + 0 ID=cds.g2544.t1;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS exon 2961 3639 . + . ID=g2544.t1.exon2;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS CDS 2961 3639 . + 0 ID=cds.g2544.t1;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS exon 3734 3948 . + . ID=g2544.t1.exon3;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS CDS 3734 3948 . + 2 ID=cds.g2544.t1;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS exon 4074 4223 . + . ID=g2544.t1.exon4;Parent=g2544.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS CDS 4074 4223 . + 0 ID=cds.g2544.t1;Parent=g2544.t1 #PROT g2544.t1 g2544 MWGAGCQTHCACENGAACNATTGECTCAFGWTGVVCNVIVAPSVPKVNATAEVSDYRVGIRLRWSHDDVGPRAWSNPGWRYEISRAGCFPKVYQVGDVLTFLDLDVVVNQGYTYFVKAYNSRNVSSTKAGQFAIESLEKAEPPSPPYNVSSTPTLNPDNQKSMIKFTWKEDTSSGPIIKTLIFRDGLLVLEGYTATEYKDRNVEFGKTYVYEIISVNQYGNSTATRFSETASIGPSDAGATAGASSSSNVAGPVAGGVVGAIVGAAGIVFAILFVRKRTRKKMEAVARSELDLIDTVVRRPEIAEIEIPGSCIHLHNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSSDEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKVSDFSSSDLLCFCIGKKPDVTSRHQ* # ORIGINAL: g2543.t1 original gene structure, not modified by PASA NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS gene 1514 1903 . + . ID=g2543;Name=g2543.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS mRNA 1514 1903 . + . ID=g2543.t1;Parent=g2543;Name=g2543.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS exon 1514 1903 . + . ID=g2543.t1.exon1;Parent=g2543.t1 NODE_2238_length_7117_cov_21.9928_potentialcontaminant AUGUSTUS CDS 1514 1903 . + 0 ID=cds.g2543.t1;Parent=g2543.t1 #PROT g2543.t1 g2543 MERLATVSLERAHALLGGRAQTATKSVQAVVLAPTAAVLALVITAQRATVSLERAHALLGGPAQTATKSVQAVVLAPTAAVLALVITAQRATVSLERAHALLGGRAQTAIKSVQAIVLATTAAELAARA* # PASA_UPDATE: g8403.t1, single gene model update, valid-1, status:[pasa:asmbl_5214,status:12], valid-1 NODE_2901_length_4806_cov_36.7781 . gene 323 4679 . + . ID=g8403;Name=g8403.t1 NODE_2901_length_4806_cov_36.7781 . mRNA 323 4679 . + . ID=g8403.t1;Parent=g8403;Name=g8403.t1 NODE_2901_length_4806_cov_36.7781 . five_prime_UTR 323 417 . + . ID=g8403.t1.utr5p1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 323 799 . + . ID=g8403.t1.exon1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 418 799 . + 0 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 1198 1435 . + . ID=g8403.t1.exon2;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 1198 1435 . + 2 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 1754 2313 . + . ID=g8403.t1.exon3;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 1754 2313 . + 1 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 2559 2951 . + . ID=g8403.t1.exon4;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 2559 2951 . + 2 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 3375 3600 . + . ID=g8403.t1.exon5;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 3375 3600 . + 2 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 4032 4561 . + . ID=g8403.t1.exon6;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 4032 4561 . + 1 ID=cds.g8403.t1;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . exon 4675 4679 . + . ID=g8403.t1.exon7;Parent=g8403.t1 NODE_2901_length_4806_cov_36.7781 . CDS 4675 4679 . + 2 ID=cds.g8403.t1;Parent=g8403.t1 #PROT g8403.t1 g8403 MDLTVLSKLPSGAPGRSLDVLDIAFALKINVSATAKSSEIDNPIVPSSITSAGLTTHLRCPAHGAPELYFNGLPSVFSPLRLLFAPSSSPLTPTGVVIGMPCADVSALSFLTAVSSGYYMAAATSTDPIVNPLRFDYSQVVDKMRAALHIWFSVNSDGNLIGAGSWLGSDIVEETSSFRSGGSLSILVPSGSYDSKYSALLSPGDTTSFNNYVIKAGSFGFSAEAWILFTEDAMKASRALPLTLFSVMSNSVDLITQFALASVRAVSYVDQFLLLSVSLVSVHDGTTSTIEGGTLFATADGGAGTNIIAHVVLTQSYVTGRVMLYIDGKAVARSEYTQPGMRQPPLPRDAYIQFGPSPVALTYDEVALYDYELSATDVASHRTCGAAMICPATVCVSAITTQCPPQLLGSWDVLGEDGGSTTNRVNGGLSITGIANGYTSLLLNYPPIALSLTIFCQPIGTSGLDYEVHGIDSESAGMGKGVFSLSRDGLAMQWYFVSGDPGCADGNATFYTEATGSTRMSFVRTTSYTTLIRSTKPYFYAWFGSYESNGGIKLEGLFNNEMLTFTPSLAPPGGQYAASTSLIQDTSPYATALQISKGVSISFQNNIIPRPSSFGYTVEAWFQSTKDILTPELLLSISGFGQSDLRVELTSSQLNICKLTARIPLDNGSPLVASGNSSGRTLPLKSDPLAHFVLTSSPITGIVAMFIDGNLVFTQRDAVPRRAPPVSGSLQLSLGGAESSGAVTMDDIAIYDYAMEPRDVQWHSNCGRNGTVCPPRA* # PASA_UPDATE: g14504.t1, single gene model update, valid-1, status:[pasa:asmbl_4354,status:12], valid-1 NODE_2458_length_6195_cov_41.3658 . gene 146 3185 . - . ID=g14504;Name=g14504.t1 NODE_2458_length_6195_cov_41.3658 . mRNA 146 3185 . - . ID=g14504.t1;Parent=g14504;Name=g14504.t1 NODE_2458_length_6195_cov_41.3658 . five_prime_UTR 2840 3185 . - . ID=g14504.t1.utr5p1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 2741 3185 . - . ID=g14504.t1.exon1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 2741 2839 . - 0 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 2479 2539 . - . ID=g14504.t1.exon2;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 2479 2539 . - 0 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 2101 2204 . - . ID=g14504.t1.exon3;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 2101 2204 . - 2 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 1761 1879 . - . ID=g14504.t1.exon4;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 1761 1879 . - 0 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 1199 1367 . - . ID=g14504.t1.exon5;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 1199 1367 . - 1 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 943 1002 . - . ID=g14504.t1.exon6;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 943 1002 . - 0 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 771 836 . - . ID=g14504.t1.exon7;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 771 836 . - 0 ID=cds.g14504.t1;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . exon 146 292 . - . ID=g14504.t1.exon8;Parent=g14504.t1 NODE_2458_length_6195_cov_41.3658 . CDS 146 292 . - 0 ID=cds.g14504.t1;Parent=g14504.t1;3_prime_partial=true #PROT g14504.t1 g14504 MSFLFKKQAKSPQDLVKLTKEAIASIDGSNKKKGAEEVSKHLLAMKAILYGEGDIEPQPELVAQLAQEAYNNDLLLSLVTNIAKFEFEAKKDAAQIFNNLLRRQIGTRSPTVEYLCSKEIIIFTLLDGYTNPDIALPCGMMLRECLRHESLSKILLHSEQFYRFFEFVEMSTFDIASDAFATFKDLLTKHKALCAEFLEANYDRIFGLYTSLLNSENYVTRRQSLKLLGELLLDRANFGIMSKYIGNPENLKLMMNLLRDKSRNIQFEAFHVFKV # ORIGINAL: g14505.t1 original gene structure, not modified by PASA NODE_2458_length_6195_cov_41.3658 AUGUSTUS gene 3737 4312 . + . ID=g14505;Name=g14505.t1 NODE_2458_length_6195_cov_41.3658 AUGUSTUS mRNA 3737 4312 . + . ID=g14505.t1;Parent=g14505;Name=g14505.t1 NODE_2458_length_6195_cov_41.3658 AUGUSTUS exon 3737 4066 . + . ID=g14505.t1.exon1;Parent=g14505.t1 NODE_2458_length_6195_cov_41.3658 AUGUSTUS CDS 3737 4066 . + 0 ID=cds.g14505.t1;Parent=g14505.t1 NODE_2458_length_6195_cov_41.3658 AUGUSTUS exon 4172 4312 . + . ID=g14505.t1.exon2;Parent=g14505.t1 NODE_2458_length_6195_cov_41.3658 AUGUSTUS CDS 4172 4312 . + 0 ID=cds.g14505.t1;Parent=g14505.t1 #PROT g14505.t1 g14505 MDFSKLTDAELRVELKRRGFPVGPITATTRSVHVKKLQQHAAEHKVANGEKSGQENGVANDGPMPMDYCYEDEDSLSDCEEQQTNASVVARGAGPRTPTASPPPLHGANKMTAAGIVRLSDAELRRELVARGQKVGPVTATTRSVYEKKLVGLLGK* # PASA_UPDATE: g57.t1, single gene model update, valid-1, status:[pasa:asmbl_947,status:12], valid-1 NODE_1248_length_12761_cov_54.9525 . gene 64 1322 . + . ID=g57;Name=g57.t1 NODE_1248_length_12761_cov_54.9525 . mRNA 64 1322 . + . ID=g57.t1;Parent=g57;Name=g57.t1 NODE_1248_length_12761_cov_54.9525 . five_prime_UTR 64 68 . + . ID=g57.t1.utr5p1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . exon 64 311 . + . ID=g57.t1.exon1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . CDS 69 311 . + 0 ID=cds.g57.t1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . exon 467 569 . + . ID=g57.t1.exon2;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . CDS 467 569 . + 0 ID=cds.g57.t1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . exon 709 856 . + . ID=g57.t1.exon3;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . CDS 709 856 . + 2 ID=cds.g57.t1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . exon 1156 1322 . + . ID=g57.t1.exon4;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . CDS 1156 1258 . + 1 ID=cds.g57.t1;Parent=g57.t1 NODE_1248_length_12761_cov_54.9525 . three_prime_UTR 1259 1322 . + . ID=g57.t1.utr3p1;Parent=g57.t1 #PROT g57.t1 g57 MQRMAPDRRTKMDRNKDRDIGEAIALGLPAAGVGQTQEALYDTRLFNQNKGMDAGFGDEDSYNVYDKPLFNNKDPGIYRPKTNVDNEIYGDDVDAIVKRTDRFHADKGFQGADPAAAGQKRDGPVQFERVEEEDMFGLDKFLTDAKRGKRPLDAIGKGTLHAGASGAGSTEGRGDRKINFDKSSSRDDERSSKRSRHE* # ORIGINAL: g58.t1 original gene structure, not modified by PASA NODE_1248_length_12761_cov_54.9525 AUGUSTUS gene 1879 12645 . + . ID=g58;Name=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS mRNA 1879 12645 . + . ID=g58.t1;Parent=g58;Name=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 1879 1951 . + . ID=g58.t1.exon1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 1879 1951 . + 0 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 2418 2732 . + . ID=g58.t1.exon2;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 2418 2732 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 3091 3417 . + . ID=g58.t1.exon3;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 3091 3417 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 3760 4065 . + . ID=g58.t1.exon4;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 3760 4065 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 4322 5150 . + . ID=g58.t1.exon5;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 4322 5150 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 5483 6072 . + . ID=g58.t1.exon6;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 5483 6072 . + 1 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 6431 6751 . + . ID=g58.t1.exon7;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 6431 6751 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 7137 7499 . + . ID=g58.t1.exon8;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 7137 7499 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 7737 8021 . + . ID=g58.t1.exon9;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 7737 8021 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 8308 8643 . + . ID=g58.t1.exon10;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 8308 8643 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 8910 9230 . + . ID=g58.t1.exon11;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 8910 9230 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 9445 9557 . + . ID=g58.t1.exon12;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 9445 9557 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 9991 10110 . + . ID=g58.t1.exon13;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 9991 10110 . + 0 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 10321 10416 . + . ID=g58.t1.exon14;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 10321 10416 . + 0 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 10615 11551 . + . ID=g58.t1.exon15;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 10615 11551 . + 0 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 11771 12058 . + . ID=g58.t1.exon16;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 11771 12058 . + 2 ID=cds.g58.t1;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS exon 12317 12645 . + . ID=g58.t1.exon17;Parent=g58.t1 NODE_1248_length_12761_cov_54.9525 AUGUSTUS CDS 12317 12645 . + 2 ID=cds.g58.t1;Parent=g58.t1 #PROT g58.t1 g58 MAVARRVGLALIAFVALANMISAEDGCLVLHPNILDPSVTAVNKLIGTVYEGATAIPATISTYLVSPVEAKNSFVADTAGGITYKASVPGFDVTDPDGDTYTLGASASRSVRITLTSPKCTATVTLFIIGTDYRIFPFDLGFIATRANQALTFNLVVQQYGAAAGSYVNMPASTFGYNYYFRFNGQKYTPNDAIKTPVTLTGPASYTFPGYVTYEMYFYRDGFSDSLLCVFPLRVWMTALRSNNINKVTPIALFPSDLLTQLPAIGPKTPTDYTTGVTCTILNSFPTDSTKFKTDATGSITRVSASDLPITPISQPYMNELQCKKGPALQGSLLQLTYVFDLEFDDVQSSTLTVRANTYTMPESAPTATSPISYPLGTLLPIGFRLKDGASSYVPLSSYKIDFVNAASPCEKDLTFCGARYFAAVKGSAAWQVSTIQTDLDFEPVGSPPGWDGNYKLPVAASSPTGTHESIAFTLQRLSTYNIKLTDVDEPPTLLVFNQTAAIVETVAGDDPIRTLGVLTAEDLDAVDVGKQTFTLTSHTYPTFGALSLSVVNGAVLLLASAPLDYERTSGGSITLTVNIAARSRTTLQTSFNIINANEKPTSITRTVVVATINENAAALKVAQLTMVDPDGACSEYFCTTAPVFQITSGGNFFTVDGTGALSTSGPLDYETTPTVSVTLTVTDGGGLTSDPVTFTYTVNDLNDPPKNIHLESVSGQASFPENSVGGVVIGQIVADDQDAKDKTLTYTVVLGTPAKFEFVASTRTLRTLAGVTYDFEAADLKTDSGQRGYLISVTAKDTSNASIQKDLLIPMTNVDEPSTGVTFQLSSAAVIQDDAPVGYSLGFVYCIDPDCKCAPNTFCRECGVSPQMDASDKNNRQIAFRGDNELFVASKLTAGAITARVKCVDSANEPAFDVKFNVKDVNDAPTGISFQSPNPSVNENTKNVMIGRLTTADPDVGNTFTYSIGQVAASDPANNNVVSDEQAKYGAMLQLRNGNELWVKDADTSKFNFEPKPLITVRISTTDSGSPGYTRQFDVKFAINDMPEQSTGMELRGNLVSENSKEGTPIGELSTTDEDFFDTFTYTVTDTANFKTAPGSAILMVGSSQKFLGKSSIDVVVTSSDGTYTFSKTFTILVLNVNKPPIAMYPSSFTVPENSPVGTKVFGPSKDKSVTTSALSADDPDIADGHTFELVQDAGGLFTITNGALVVARDGQLDFESVVKSYAIAITATDNGTPSRSLTVPMVVTVTNVNEPPRLISLSALRIKENSPAGTAIGDFSATDPEGDVMSFTLDQASLDLKKFVIDSTTVPGTYTLRLAPGASVDYETTPDPYVIAVIANDGHPGGTATETFRITVDDVNESPTIISMDSSAVAENSPTDTVVGVFSTADPDVGQRFTYVLLSALPLGSNGKSQFAINSNRLVVAVGATLDYEQRSNYTISVKSTDNGIPAQQTSGTFTIFIRDVNESPVIDVKQVLIIDENSVRDGIVGTLAAVDPDGDTNLQFRVNSGGSGFFYVLGKNQLAVARPGLDFESSTRSYQIVVYCSDSGTPTRDALSTLTVSVRDVNEAPTDLTVNQRVVSEVDEGLGVAPAPVLVDYISVADQDFNEVHAITIDYTEPTTLAACKVFVVAGTPKALYLDANKPLDYEKLPANDKTCVLKMTAVDRDGAGFAVSRLITVTVQDLNEAPTDIKPKFNTTIPETLTVGTTLGDFDVVDPDAAQTFTLTSSGGRSIPVAVIENKMRVILPLDFETLPSFTLRVRVADQGLRFYEKDIVFTVLDRNEPPSDIVPTFVDISEEAAVGFRVGSLRVVDPDVGDTHTLNLTNSAQSRFRLENGQIYVNRALLGDGGTNFTIGVTATDKEGQMYVASLIIPVIDVNQAPNDIQLSIAELLENSDPGYIVGEFSVQDIDKLQTHTLVLTDDGRGSFRIVGKELVVAAGSKMDYEATPTISITVKATDNDPVRPLSFTKTFAVALGGGCDAMVM* # PASA_UPDATE: g10599.t1, single gene model update, valid-1, status:[pasa:asmbl_897,status:3], valid-1 NODE_1235_length_12858_cov_43.1888 . gene 6950 10604 . + . ID=g10599;Name=g10599.t1 NODE_1235_length_12858_cov_43.1888 . mRNA 6950 10604 . + . ID=g10599.t1;Parent=g10599;Name=g10599.t1 NODE_1235_length_12858_cov_43.1888 . five_prime_UTR 6950 7128 . + . ID=g10599.t1.utr5p1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 6950 7334 . + . ID=g10599.t1.exon1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 7129 7334 . + 0 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 7487 7683 . + . ID=g10599.t1.exon2;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 7487 7683 . + 1 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 7992 8128 . + . ID=g10599.t1.exon3;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 7992 8128 . + 2 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 8361 8433 . + . ID=g10599.t1.exon4;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 8361 8433 . + 0 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 8747 8896 . + . ID=g10599.t1.exon5;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 8747 8896 . + 2 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 9218 9378 . + . ID=g10599.t1.exon6;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 9218 9378 . + 2 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 9522 9806 . + . ID=g10599.t1.exon7;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 9522 9806 . + 0 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . exon 10055 10604 . + . ID=g10599.t1.exon8;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . CDS 10055 10510 . + 0 ID=cds.g10599.t1;Parent=g10599.t1 NODE_1235_length_12858_cov_43.1888 . three_prime_UTR 10511 10604 . + . ID=g10599.t1.utr3p1;Parent=g10599.t1 #PROT g10599.t1 g10599 MRSLASITPEESEKERDKMRRILGPFRRNSTPTTDAEKRAVPADSDSDDGAAGGSSIAISHKRMEDVDRAVAEAIERASAILERTAEERKRAPPSPPSVVSQWVESVVTFSSQYNGTTWAANMIVGQPRVYPNYGDLHGAWAPGSTSGHEFIHIRYAQPVILHELDIYETNVPGAIVLITALHITAEALQQGRLDEGEWVAVWAGPAELRQLTAQARIFRPTITRRDIVTRNIRIEMDCRGAPSWCELDAVAMKGDASCSVRREISETTPFQRQLKSMCASSAYSDIAFDVRGVVIPAHRVILAARCEVFRAMLSANMKESETHRIVVPDIDPRAFRLLLEYIYTDAVEIPPAMALWIYFAAEKYSLDALRIMALGAIESCLDVAGVVAVYKYVSELFPELKEACTKFMVSHASVVAHTPDFATLPFKMLLEVTQAFAADIPLRSNASPVGQAASTTRPLATGTIANRLSIPAFVEETDETSESNNAAASAGNPQNLWTVPNALQAGPGVSLLAAMSALVQPGSAPAPTSADAPPDNDGGDDDSDEYETDEDEV* # ORIGINAL: g10600.t1 original gene structure, not modified by PASA NODE_1235_length_12858_cov_43.1888 AUGUSTUS gene 11100 12647 . - . ID=g10600;Name=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS mRNA 11100 12647 . - . ID=g10600.t1;Parent=g10600;Name=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS exon 12514 12647 . - . ID=g10600.t1.exon1;Parent=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS CDS 12514 12647 . - 0 ID=cds.g10600.t1;Parent=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS exon 12157 12282 . - . ID=g10600.t1.exon2;Parent=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS CDS 12157 12282 . - 1 ID=cds.g10600.t1;Parent=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS exon 11100 11820 . - . ID=g10600.t1.exon3;Parent=g10600.t1 NODE_1235_length_12858_cov_43.1888 AUGUSTUS CDS 11100 11820 . - 1 ID=cds.g10600.t1;Parent=g10600.t1 #PROT g10600.t1 g10600 MCCTVYTCSGCLLGKTVAQLNNQTQRLLGQQSTAEFMGLHMDPVPVGEENSKVQGPDVRRKGGLIIHTGNKRTKEEIDEKINLNKQKYEVPEEEWKAIELKPVPLDGGRTELDRKREELKQLKERLAAVQRAISAGKDVDAVTTSADDASDKSADSSAVSPDASGTKGKAESKVAVAHADQAAVIAVKRGRKSVEANADVTMTDAKDDAENDTTPKSKRARVAAPTKESAAAGTKVVTPKATPKAKASAKGRGGKRSRKNASDDSDGDDAVSAPSDDDFPAAKRASTGRSTQRRSAGKAAPKYAEPSDDEDVQMALAISASMDAQH* # PASA_UPDATE: g10598.t1, single gene model update, valid-1, status:[pasa:asmbl_890,status:12],[pasa:asmbl_891,status:12],[pasa:asmbl_892,status:12],[pasa:asmbl_893,status:12],[pasa:asmbl_894,status:12],[pasa:asmbl_895,status:12],[pasa:asmbl_896,status:12], valid-1 NODE_1235_length_12858_cov_43.1888 . gene 7 6145 . - . ID=g10598;Name=g10598.t1 NODE_1235_length_12858_cov_43.1888 . mRNA 7 6145 . - . ID=g10598.t1;Parent=g10598;Name=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 5786 6145 . - . ID=g10598.t1.exon1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 5786 6145 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 5448 5594 . - . ID=g10598.t1.exon2;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 5448 5594 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 4666 5265 . - . ID=g10598.t1.exon3;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 4666 5265 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 4190 4368 . - . ID=g10598.t1.exon4;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 4190 4368 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 3834 3969 . - . ID=g10598.t1.exon5;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 3834 3969 . - 1 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 3349 3579 . - . ID=g10598.t1.exon6;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 3349 3579 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 2982 3146 . - . ID=g10598.t1.exon7;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 2982 3146 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 2696 2818 . - . ID=g10598.t1.exon8;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 2696 2818 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 1857 2439 . - . ID=g10598.t1.exon9;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 1857 2439 . - 0 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . exon 7 1615 . - . ID=g10598.t1.exon10;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . CDS 288 1615 . - 2 ID=cds.g10598.t1;Parent=g10598.t1 NODE_1235_length_12858_cov_43.1888 . three_prime_UTR 7 287 . - . ID=g10598.t1.utr3p1;Parent=g10598.t1 #PROT g10598.t1 g10598 MTIVIPDISVSVESDAHSESTPASQGGHRQLVLNTTAANAPANGTSLGPVPPTPGPRKAMESIIALESFRLRHSARASSRRRIPIPKAPAQSVGENGDANTAIEDEMNLEQLRTLMRMFEEADAQGTGELSMEEFKEAFRQVFGGKDNDEQMTMLFMKIDANSDGTIDWDEFCTYMLLEYQEKNEMNTREVDPFEPMPSVAEVPHHESIQRILFNPVDRRYITASKDGYLCWWDMYMNLYKSIKLDDAWITDCVAMPDISKICLALGNRELSFYDVKSSDVQLRITHMDHAPLCIHYAQANKKLEHRTLIFGDDNGYVNVISLLHTEGLFRSAAKKNRVPELRFDKLLSSAYESVRLFRYRLHSDWVLEARYLPTIHCFVSCSKDERASTVVFDMDRLRVRSTFKVKKGVNSFDYSPEGNVIATGGQDRAIRLFNPYVLKPAAVMRGHEGTVVKVVVNDNSRHLITLSHEKVIKIWDIRDQICLQTIHGQPYTSHSDEFNSIIHNPFTNAIVVASHQISSWRLRPRESTNEMPKSHAKPICAALYNENFKQVVSGCHGSACCIWDIETGQKVFRFTELHGHSEITAMAFDAFGRRLLTGARDGSLKMWNFNNGQCLKELVRGSESEVSDIVHIEKGRQIITVGWDKRVVVFEDATDTYSMRPSSIWEGGGHTEDILCMSVAAPHFVATGSYDGAVLLWNTVSGHMLNRLVAPTLAERSRDDRAIEKLLFLKHRMRSAQLRTVGGTLVACGAGGMVYFWNVMQGVLVGSFCASHVKGDPVVAMVSDGENRNLWTGDTKGYITCFNISNYAVSMDEHAAAPPLLRSWRCHAMSISSIDIAPSYGVLITSSVDRTVRLWTLTGQYVGTFGQSMPWRLGLPSTYRTSLPADLEREPSASGRARQAASSPESKSRQGSASGADREDSGGSGDENAAAAVPPRSQPQQQQQHQASEASKEQKSVGPTISISEPDAASGMQSLSLQPTQGAPHANARPISARSQSSKRRSEVRGVFAAVVGLVAQSGPSGQPQGAGTGDVAVQQSMRPPVLNLNLSFALDTSLTPLTRDREEPPPDITDDSEYRDFESVLHNKRTSYERKYCDERVRKPLMSTHFAMQFKTNDGTAPAAPVVDRAFAGLKEGTIVYHSLRCCELEDVALPPLPVAGTGLLSSLLGQQQLQQQQPSAAAPPTIVQPPPQSRGGRSMLASTSVANTQGTSQLGAPSTGLGAPSVVFPPISSGIGMASASVAATGNRTASSAARVRKPGFRWNEKNLFPNLITIPLDRGNLGN* # PASA_UPDATE: g7427.t1, single gene model update, valid-1, status:[pasa:asmbl_4911,status:12], valid-1 NODE_2734_length_5295_cov_35.4634 . gene 157 4381 . + . ID=g7427;Name=g7427.t1 NODE_2734_length_5295_cov_35.4634 . mRNA 157 4381 . + . ID=g7427.t1;Parent=g7427;Name=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 157 312 . + . ID=g7427.t1.exon1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 157 312 . + 0 ID=cds.g7427.t1;Parent=g7427.t1;5_prime_partial=true NODE_2734_length_5295_cov_35.4634 . exon 900 1067 . + . ID=g7427.t1.exon2;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 900 1067 . + 0 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 1368 1478 . + . ID=g7427.t1.exon3;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 1368 1478 . + 0 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 1712 1785 . + . ID=g7427.t1.exon4;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 1712 1785 . + 0 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 2264 2371 . + . ID=g7427.t1.exon5;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 2264 2371 . + 1 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 2787 2856 . + . ID=g7427.t1.exon6;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 2787 2856 . + 1 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 3042 3205 . + . ID=g7427.t1.exon7;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 3042 3205 . + 0 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 3611 3792 . + . ID=g7427.t1.exon8;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 3611 3792 . + 1 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . exon 4241 4381 . + . ID=g7427.t1.exon9;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . CDS 4241 4311 . + 2 ID=cds.g7427.t1;Parent=g7427.t1 NODE_2734_length_5295_cov_35.4634 . three_prime_UTR 4312 4381 . + . ID=g7427.t1.utr3p1;Parent=g7427.t1 #PROT g7427.t1 g7427 VLNEVACAMFDATMVDEVFKLQEQYTLPAARMMFEELAHASIMRLDATSLDKLYDLMVMGVKYQLTLCEQPRELLDITSNHLNSVRYLIADCAPGLVKLEGVLARFKKRYGAYKDAEFQRIRQSLFLFFQDKRTRVSLFLEDKLQSSDATFFLPASGPLPKGFDVPGTVRYFGLSGSEELSDMLKHPWKSSPRSSTKTITDLGLNLYRSRTKCPADPPLLGEGARRKSESKLKGLSEEEMTKKAREEVDALGRIMGTRRSSQPASNSTVETFKINLFSDGAFFDPNYKDDSSNQRLSRSSIGSNGKSITIDASRGSSLTPEMLRILDGFSIEARRKPKEIEGGLAIGSDEEDEEDIDDLLDLMDIAG* # ORIGINAL: g12855.t1 original gene structure, not modified by PASA NODE_1379_length_11681_cov_41.1264 AUGUSTUS gene 6489 11537 . + . ID=g12855;Name=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS mRNA 6489 11537 . + . ID=g12855.t1;Parent=g12855;Name=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 6489 8240 . + . ID=g12855.t1.exon1;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 6489 8240 . + 0 ID=cds.g12855.t1;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 8493 9356 . + . ID=g12855.t1.exon2;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 8493 9356 . + 0 ID=cds.g12855.t1;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 9643 9835 . + . ID=g12855.t1.exon3;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 9643 9835 . + 0 ID=cds.g12855.t1;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 10126 10309 . + . ID=g12855.t1.exon4;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 10126 10309 . + 2 ID=cds.g12855.t1;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 10838 11537 . + . ID=g12855.t1.exon5;Parent=g12855.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 10838 11537 . + 1 ID=cds.g12855.t1;Parent=g12855.t1 #PROT g12855.t1 g12855 MTTPNLCSTIGVLTVTSAIVDSTVSSVTSLVVTASASNAVVAFTALTSAGSISVVGTGTTNLLLPSLKTVSTSLSIASNSNLLTVNLTSLTSVGQGGALDGLTITSAPLLAALSFPALTTVNGSVIIANSTNPATVAFPVLSRVTRNIVVQNLVSLDQLFLPKLTRLDGNLTVTSNSQMKSISVPLLTGCAFYPCTTLFDISNCPLVTLIDVSEVSGVGGMSITSMNSLRNISAHSLQMVFGSLFVGFNTGPIEATLPKLFEVGDLTFSNSGVTAFSAGTLSSIARTATFVNNQHLRSISFFSFSRVGGLRIDDNTVLVNVTNARQVLGDISVSRNAALTTFDLQATVQVGGVVYVTDNPALSALSFPALLGSCSSVTVTGNAALASFSLPLLTNITGFLHIYNNSQLASASLGSLFKVSGYVLFASNTRLRDVAVVGSVGSYLQLTDNAVLRSLNVSLLTDVGAFLHIERNGALDSNWTAAFDALKYVGDYVRVQSNPGLAGVSFRTCVSIGSYVNVSNCASLATVNFTALTSVAKEFVLQNCTNLSTISVPVLASVGSVVVENVGAWSVALPVLATAISFIKISSNNNILSVAALNLRIVGESLMLLDNPRLSDVGLVGLTAVGANIAVANNPRIASLSLSSIAHINGTYPYSTTDASLYIANNVRLASLSISPSLVVADGNIRLLDNVCLDMSTLVTTLNNTLSSRPAQVVSVGGLQYSQNACANVGISINPTKTTATVVTTAPTTLTIVTGSPTAASALTTATLATATATTTATVTALHTFNEMSDLATSLSTATTAAMLNAPNQIAKAVDDIMRASDMMNDVMNNFSLVAPSDVSSISSAGVDLMHTSVSAIDAVATAAFDMGMHPDVEGNLMRAMDGMLSPSMRPLLSLSGMASDMPALLEKVLYSIGGNDSCRKDKEYSLLNFYGKAFTVFRNTSAVTASSNGTLGGASFTLLDAGGLLANQSGSANGASGTACAVGHFAVMDENTVSRLQASVPADEGTLTPVRQRRVNSKVISVGLRNTSVSTPGSVVIRFELSVDVAASSSGAATDLEAAVNAEFTRLAAAGQLAAAMKCGFYDEALDKWSTRGCWVERTEGGRVTCACSHLTSFALLFDITGEADSKALRVITYIGCVTSVVCSFAVFVTYAVHAKLRTFPIRILMALVACIFASQLVFLAGFDNAGSAGTGSCVFVAVLMHYFFLASFMWMAVEAYNLRAMVVEVAKLP # ORIGINAL: g12854.t1 original gene structure, not modified by PASA NODE_1379_length_11681_cov_41.1264 AUGUSTUS gene 1688 3160 . - . ID=g12854;Name=g12854.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS mRNA 1688 3160 . - . ID=g12854.t1;Parent=g12854;Name=g12854.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 1688 3160 . - . ID=g12854.t1.exon1;Parent=g12854.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 1688 3160 . - 0 ID=cds.g12854.t1;Parent=g12854.t1 #PROT g12854.t1 g12854 MMQSIIAHASLAGHRACSRAALATCNSAPLFVHLRRLETQAHATVQPGHASDPAIVDLTAAALQSSLVTAAVDGASTQTASVFTLMRQELVTGQYGSLVARIPFDLRVRAHDNFDKQVDYSRVADLSEQVLSRMNNTTTNAVVEVKATGFQTAETARDYFKKMGIQTSSALDEKNETLVTIDSSVPREGVAGARQALDKIIERLPGRFHVDVMLPLKFAVDVASRGGVVSVEGMEGPLVKVASASGHVKATRLKTDALTVRTVSGNIDLDSVHSNTHLTSESGSISIGKVQGQTFSARTATGNIGIRTLYAETASVVTQSGEVRLGNIHGAVEVVSVKGPVTIGGVDGSLTCMTDTAPVDVGIVRHERISITSPNSSISIGVPPNLAATLYVRSTKAPQVQGEGLTYKVTPTAPSDSLAVCQVGTLNGGGNPIHANTLLGDVKIVERSWFQGMNAKLAPLFVSENPQPATRATTVPVAKVDESAPSEVSP* # ORIGINAL: g12853.t1 original gene structure, not modified by PASA NODE_1379_length_11681_cov_41.1264 AUGUSTUS gene 303 718 . + . ID=g12853;Name=g12853.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS mRNA 303 718 . + . ID=g12853.t1;Parent=g12853;Name=g12853.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS exon 303 718 . + . ID=g12853.t1.exon1;Parent=g12853.t1 NODE_1379_length_11681_cov_41.1264 AUGUSTUS CDS 303 718 . + 2 ID=cds.g12853.t1;Parent=g12853.t1 #PROT g12853.t1 g12853 IVLWEFLCASIPYLDFIEEQNLSLETILFRVIEEDMRPAYDKARCPSRYMRLMESCWNTDALSRPSFASISAVVEEMISTYAHGHISFPLSTGTPMSNGPKQDYKARKISKCVDLPHGIRPSGSISNVQPGHASTGD* # ORIGINAL: g2851.t1 original gene structure, not modified by PASA NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS gene 694 1410 . - . ID=g2851;Name=g2851.t1 NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS mRNA 694 1410 . - . ID=g2851.t1;Parent=g2851;Name=g2851.t1 NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS exon 1267 1410 . - . ID=g2851.t1.exon1;Parent=g2851.t1 NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS CDS 1267 1410 . - 0 ID=cds.g2851.t1;Parent=g2851.t1 NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS exon 694 1185 . - . ID=g2851.t1.exon2;Parent=g2851.t1 NODE_4543_length_1478_cov_61.7284_potentialcontaminant AUGUSTUS CDS 694 1185 . - 0 ID=cds.g2851.t1;Parent=g2851.t1 #PROT g2851.t1 g2851 MSAEADIGHADAVALIVRELNTLTWRIDVHVHSLHMIWQSAFPRSLEEVNAAATNAAATTVGGSAANCISQTLNYASASHNDNDESWTMVVWADLSVAPNNAARLSNIPNDLMHVSLPAWRAKSSRYPPDSGFVGGQFAFYSYNVVTETRAGNITVLNSQWVFHGTGALAQLSNGQDADAPTLVRVGSAMMLQRRIVSAMETVNASAQLAS* # ORIGINAL: g9763.t1 original gene structure, not modified by PASA NODE_1835_length_8981_cov_42.5849 AUGUSTUS gene 71 1969 . - . ID=g9763;Name=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS mRNA 71 1969 . - . ID=g9763.t1;Parent=g9763;Name=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS exon 1754 1969 . - . ID=g9763.t1.exon1;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS CDS 1754 1969 . - 0 ID=cds.g9763.t1;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS exon 1374 1482 . - . ID=g9763.t1.exon2;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS CDS 1374 1482 . - 0 ID=cds.g9763.t1;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS exon 899 1052 . - . ID=g9763.t1.exon3;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS CDS 899 1052 . - 2 ID=cds.g9763.t1;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS exon 555 657 . - . ID=g9763.t1.exon4;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS CDS 555 657 . - 1 ID=cds.g9763.t1;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS exon 71 200 . - . ID=g9763.t1.exon5;Parent=g9763.t1 NODE_1835_length_8981_cov_42.5849 AUGUSTUS CDS 71 200 . - 0 ID=cds.g9763.t1;Parent=g9763.t1 #PROT g9763.t1 g9763 MRLRRNDILVSAGLAALALAVALCALVVTAAPAPPPPPEEHAVENVGNAGARKGEEAAGSENGAKDGSNDNKKVIQEEFARYIAELNLEKANPELRSMIKQELRRLEKESGIKEDDTTANDPDARSLMEERHRIRMDHLKRRQRTMAQKGIRDSSLDKEMYDEITRMNAERRADFHRRKVEAVAKARLGLTKAEADEVPPKDIREGVHHPGSRAQMEAAMKRQGYDDFNPKVFFRLY # ORIGINAL: g1092.t1 original gene structure, not modified by PASA NODE_1567_length_10442_cov_54.2489 AUGUSTUS gene 7002 8014 . - . ID=g1092;Name=g1092.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS mRNA 7002 8014 . - . ID=g1092.t1;Parent=g1092;Name=g1092.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 7358 8014 . - . ID=g1092.t1.exon1;Parent=g1092.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 7358 8014 . - 0 ID=cds.g1092.t1;Parent=g1092.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 7002 7253 . - . ID=g1092.t1.exon2;Parent=g1092.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 7002 7253 . - 0 ID=cds.g1092.t1;Parent=g1092.t1 #PROT g1092.t1 g1092 MKVRHRTQFRANNYEMDAYLRDAETGERLPTFKHIFIAQPGRAFRVCADTPMRHLWGYVVIDGCTRGNSKFSHGSMVCKGHRGSDDEIHPFVFGFPQYSEGDVTMSPDAIAAIGSVEVKCYKVSRVQVLPSTTARSSTTNNSASNTGSGGSGGSGGSGGSGDSARQSGIVVPAGKKFAARLVTTTLGAPVSRTAVNVNPDLRALASQAASQGDRKPPRRMLRAEGVLDPVSVPAHRVYFPARNWSVPEGESATQEHAPRDRDERPVVHTHVTHIDLTDDANVRVTVRERESAPPAAKIEMHL* # PASA_UPDATE: g1088.t1, single gene model update, valid-1, status:[pasa:asmbl_1993,status:12], valid-1 NODE_1567_length_10442_cov_54.2489 . gene 148 391 . - . ID=g1088;Name=g1088.t1 NODE_1567_length_10442_cov_54.2489 . mRNA 148 391 . - . ID=g1088.t1;Parent=g1088;Name=g1088.t1 NODE_1567_length_10442_cov_54.2489 . five_prime_UTR 328 391 . - . ID=g1088.t1.utr5p1;Parent=g1088.t1 NODE_1567_length_10442_cov_54.2489 . exon 148 391 . - . ID=g1088.t1.exon1;Parent=g1088.t1 NODE_1567_length_10442_cov_54.2489 . CDS 148 327 . - 0 ID=cds.g1088.t1;Parent=g1088.t1;3_prime_partial=true #PROT g1088.t1 g1088 MGPTLKLCAAALALVCALCAALHVDATASYLEKVSIERIGALTLYKGKLTTGRRSQPVPQ # PASA_UPDATE: g1091.t1, single gene model update, valid-1, status:[pasa:asmbl_1995,status:12], valid-1 NODE_1567_length_10442_cov_54.2489 . gene 5371 6723 . + . ID=g1091;Name=g1091.t1 NODE_1567_length_10442_cov_54.2489 . mRNA 5371 6723 . + . ID=g1091.t1;Parent=g1091;Name=g1091.t1 NODE_1567_length_10442_cov_54.2489 . exon 5371 6267 . + . ID=g1091.t1.exon1;Parent=g1091.t1 NODE_1567_length_10442_cov_54.2489 . CDS 5371 6267 . + 0 ID=cds.g1091.t1;Parent=g1091.t1 NODE_1567_length_10442_cov_54.2489 . exon 6409 6723 . + . ID=g1091.t1.exon2;Parent=g1091.t1 NODE_1567_length_10442_cov_54.2489 . CDS 6409 6723 . + 0 ID=cds.g1091.t1;Parent=g1091.t1 #PROT g1091.t1 g1091 MVRLDAAAVDQVTASGTFSVLPDELLLDISRMCGNADRLSLRHTCMRWFRVAEPIIRIRVENKEMIGDVGRIARNAGGARVHVRVMGKEVEDSDVCVLASVHSLVLDSCKKLVDVSPLASCFSLSLAYTRVSNVSLLGNVHTLNLANCKSVVDVSALGRLHTLILAHTLIEDVSALGRVHTLSLLCCPHVKDVSQLGGIHTLSLAGCRSLTDVSTLSHVHDLDLSFCTGITDVSGLYGVHTLNLSGCDGVNDVSSLGRLHSLILSYCTGDFDLSALGGLDYLNITRCKYVRNLSAIVNSEHMQHIRLQPRCVSTMARSTLRQKRVHARDLDWQQLLRSAAFANCACESMGHLFHGITGRVAGVVVCYCAAMATGRTELAVEADPGSNKQERLHCSVQWVAWLV* # ORIGINAL: g1093.t1 original gene structure, not modified by PASA NODE_1567_length_10442_cov_54.2489 AUGUSTUS gene 8659 10331 . - . ID=g1093;Name=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS mRNA 8659 10331 . - . ID=g1093.t1;Parent=g1093;Name=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 10179 10331 . - . ID=g1093.t1.exon1;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 10179 10331 . - 0 ID=cds.g1093.t1;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 9732 9933 . - . ID=g1093.t1.exon2;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 9732 9933 . - 0 ID=cds.g1093.t1;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 9431 9504 . - . ID=g1093.t1.exon3;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 9431 9504 . - 2 ID=cds.g1093.t1;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 9079 9193 . - . ID=g1093.t1.exon4;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 9079 9193 . - 0 ID=cds.g1093.t1;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS exon 8659 8891 . - . ID=g1093.t1.exon5;Parent=g1093.t1 NODE_1567_length_10442_cov_54.2489 AUGUSTUS CDS 8659 8891 . - 2 ID=cds.g1093.t1;Parent=g1093.t1 #PROT g1093.t1 g1093 MVSMHISGGKLDAPFLKGLSVADIASHFNIPLTVSTEPMPGVTLEVAGPLKPFAETIHKVFQETAEILQSHGYQRLSQFVVQSVRQAALDGNGPAATTVERLAAAFPAFKDAPTWDGTVVPLFSKAQLLIGQLQKRVAPNLPDLSFSDADRLTVFGGTSVPAVLRSLGIIRLDSWLEQAIEAGTDVSSLQAPGSDAWRNYDTNIRAACVCACDEIVRRSASLTWNVSTRDLDAHLHQLAKKEPHKGIKKHNPGKTVAL* # PASA_UPDATE: g1089.t1, single gene model update, valid-1, status:[pasa:asmbl_1996,status:12], valid-1 NODE_1567_length_10442_cov_54.2489 . gene 1202 3198 . + . ID=g1089;Name=g1089.t1 NODE_1567_length_10442_cov_54.2489 . mRNA 1202 3198 . + . ID=g1089.t1;Parent=g1089;Name=g1089.t1 NODE_1567_length_10442_cov_54.2489 . exon 1202 1480 . + . ID=g1089.t1.exon1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . CDS 1202 1480 . + 0 ID=cds.g1089.t1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . exon 1808 1938 . + . ID=g1089.t1.exon2;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . CDS 1808 1938 . + 0 ID=cds.g1089.t1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . exon 2119 2221 . + . ID=g1089.t1.exon3;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . CDS 2119 2221 . + 1 ID=cds.g1089.t1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . exon 2608 2712 . + . ID=g1089.t1.exon4;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . CDS 2608 2712 . + 0 ID=cds.g1089.t1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . exon 2960 3198 . + . ID=g1089.t1.exon5;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . CDS 2960 3169 . + 0 ID=cds.g1089.t1;Parent=g1089.t1 NODE_1567_length_10442_cov_54.2489 . three_prime_UTR 3170 3198 . + . ID=g1089.t1.utr3p1;Parent=g1089.t1 #PROT g1089.t1 g1089 MFGFGMGMAGGTFVREYRCFSVAMLPNGKEEKLREMEKGGKIILPPSALDQLSRLNIAYPMLFELTNRKGNKTTHAGVLEFIAEEGRVYLPYWMMQNMVVQEGHVITVKSATLKTCTFAKFQPQSVDFLDISNPKAVLENSLRNFACLTVGDMIAINYNNKVYEMDVLELKPANAVTIIECDMQVDFAAPKGYVEPQRPAPPSDKERLAEALGPTPSNEDDEDESPKKTGFQAFGGSGYRLDGKGQKGKGKDSPNPAAAAALARASSTPIAMGQR* # PASA_UPDATE: g1090.t1, single gene model update, valid-1, status:[pasa:asmbl_1994,status:12], valid-1 NODE_1567_length_10442_cov_54.2489 . gene 3979 4818 . - . ID=g1090;Name=g1090.t1 NODE_1567_length_10442_cov_54.2489 . mRNA 3979 4818 . - . ID=g1090.t1;Parent=g1090;Name=g1090.t1 NODE_1567_length_10442_cov_54.2489 . five_prime_UTR 4582 4818 . - . ID=g1090.t1.utr5p1;Parent=g1090.t1 NODE_1567_length_10442_cov_54.2489 . exon 3979 4818 . - . ID=g1090.t1.exon1;Parent=g1090.t1 NODE_1567_length_10442_cov_54.2489 . CDS 4303 4581 . - 0 ID=cds.g1090.t1;Parent=g1090.t1 NODE_1567_length_10442_cov_54.2489 . three_prime_UTR 3979 4302 . - . ID=g1090.t1.utr3p1;Parent=g1090.t1 #PROT g1090.t1 g1090 MAAPPLRKTKTEMALRIEIPAAGQGDCLVLDSPHPRRESDTSIYSTSSETDLDACMSFKTYTIRPLYRRHTFNDSCIAITSNSVNSLDFGWN* # PASA_UPDATE: g11619.t1, single gene model update, valid-1, status:[pasa:asmbl_4427,status:12], valid-1 NODE_2493_length_6072_cov_40.2181 . gene 2392 5009 . + . ID=g11619;Name=g11619.t1 NODE_2493_length_6072_cov_40.2181 . mRNA 2392 5009 . + . ID=g11619.t1;Parent=g11619;Name=g11619.t1 NODE_2493_length_6072_cov_40.2181 . five_prime_UTR 2392 2571 . + . ID=g11619.t1.utr5p1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . exon 2392 2655 . + . ID=g11619.t1.exon1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . CDS 2572 2655 . + 0 ID=cds.g11619.t1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . exon 2785 2904 . + . ID=g11619.t1.exon2;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . CDS 2785 2904 . + 0 ID=cds.g11619.t1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . exon 3085 3428 . + . ID=g11619.t1.exon3;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . CDS 3085 3428 . + 0 ID=cds.g11619.t1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . exon 3880 4284 . + . ID=g11619.t1.exon4;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . CDS 3880 4284 . + 1 ID=cds.g11619.t1;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . exon 4541 5009 . + . ID=g11619.t1.exon5;Parent=g11619.t1 NODE_2493_length_6072_cov_40.2181 . CDS 4541 5009 . + 1 ID=cds.g11619.t1;Parent=g11619.t1 #PROT g11619.t1 g11619 MEGAQSGGDITMTALGDPSLSYAWTQTQDSVAITVYPKEEFKTKEVDVRITGTSLWAGLKGNPLPFVSGLLFSRVSKDESAWVCDAHDGRQCIEIHLQKTYEGLWPHLMADVPAAREAPSTPTDPQSLFEIAQRHEVEKDVAGAIALLERAAERDGVAALLQLASMYRVGKEGGGPVDADPEKSFALYLRAAKLGSGEAHFFVGNAYQRGFGVALNPKLALDHYALAADAAAAHQYTPVAAFQAGLLLHTGSDHHAHSDAHGVHGAHDTHDTHDTHAHEHSSAAGHGHEHVKQDMEGAVKWWRHAASLGYAPAHYNLGVMCMQGTGTKRDISAARDHFSRAHGMDPSFLIPDMPPADPAARAGELSAALRRGSIAANIGDFGLDEVERRKSGTGGSASGAGGSPGVAKRRKSGSAGGSGAGAGKDKGKKRAAGGVASQAASSSSPSSLALAGFVLGTAAVVAATMFLLRQGRR* # PASA_UPDATE: novel_model_14_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_4429,status:3], valid-1 NODE_2493_length_6072_cov_40.2181 . gene 5366 5790 . + . ID=novel_gene_14_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2493_length_6072_cov_40.2181 . mRNA 5366 5790 . + . ID=novel_model_14_5b6be656;Parent=novel_gene_14_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2493_length_6072_cov_40.2181 . five_prime_UTR 5366 5398 . + . ID=novel_model_14_5b6be656.utr5p1;Parent=novel_model_14_5b6be656 NODE_2493_length_6072_cov_40.2181 . exon 5366 5790 . + . ID=novel_model_14_5b6be656.exon1;Parent=novel_model_14_5b6be656 NODE_2493_length_6072_cov_40.2181 . CDS 5399 5782 . + 0 ID=cds.novel_model_14_5b6be656;Parent=novel_model_14_5b6be656 NODE_2493_length_6072_cov_40.2181 . three_prime_UTR 5783 5790 . + . ID=novel_model_14_5b6be656.utr3p1;Parent=novel_model_14_5b6be656 #PROT novel_model_14_5b6be656 novel_gene_14_5b6be656 MRQTIKRTTFRTERSRALKRVMRSSAVCRQVRCASSVGMGRRLSLSVVEAIGSLMEEEARIFMLVVDSTSSGVCASTAPVYVCRSHWCHSNTQCCLRCAYVCSFFCLCVFLLLYLLHYSHNSGYLYL* # PASA_UPDATE: g11618.t1, single gene model update, valid-1, status:[pasa:asmbl_4428,status:12], valid-1 NODE_2493_length_6072_cov_40.2181 . gene 281 2112 . + . ID=g11618;Name=g11618.t1 NODE_2493_length_6072_cov_40.2181 . mRNA 281 2112 . + . ID=g11618.t1;Parent=g11618;Name=g11618.t1 NODE_2493_length_6072_cov_40.2181 . exon 281 496 . + . ID=g11618.t1.exon1;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . CDS 281 496 . + 0 ID=cds.g11618.t1;Parent=g11618.t1;5_prime_partial=true NODE_2493_length_6072_cov_40.2181 . exon 666 847 . + . ID=g11618.t1.exon2;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . CDS 666 847 . + 0 ID=cds.g11618.t1;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . exon 1094 1211 . + . ID=g11618.t1.exon3;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . CDS 1094 1211 . + 1 ID=cds.g11618.t1;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . exon 1413 2112 . + . ID=g11618.t1.exon4;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . CDS 1413 1838 . + 0 ID=cds.g11618.t1;Parent=g11618.t1 NODE_2493_length_6072_cov_40.2181 . three_prime_UTR 1839 2112 . + . ID=g11618.t1.utr3p1;Parent=g11618.t1 #PROT g11618.t1 g11618 DGSCNGLQHYAALGGDLLGAEQVNLIPSEKPQDVYQGVCDLVRKVAAEDANNHKDMQMREVAKFVSEKLTRKIVKQTVMTNVYGVTYVGGRTQIEKHLREQESVVPFNRFSLVAAYVTKLVFQALDTMFMGAREIQDWLTVSARSIAIAKQPVRWVTPLGLPVVQPYVKKRAVTVSTKLQNVVTSQVSSASPVSVARQKQAFPPNFIHSLDSTHMLMTAAACRDLGITFAAVHDSFWSHACDTDEMNRALRHSFVRLHEQPIMENLRDYFVAQYEGIRDGSDKTKIKRLAFQPVPKRGTFDLTEIMKSDYFFD* # PASA_UPDATE: g247.t1, single gene model update, valid-1, status:[pasa:asmbl_3324,status:12],[pasa:asmbl_3325,status:12],[pasa:asmbl_3326,status:12],[pasa:asmbl_3327,status:12],[pasa:asmbl_3328,status:12], valid-1 NODE_2036_length_7992_cov_39.1375 . gene 2764 7940 . + . ID=g247;Name=g247.t1 NODE_2036_length_7992_cov_39.1375 . mRNA 2764 7940 . + . ID=g247.t1;Parent=g247;Name=g247.t1 NODE_2036_length_7992_cov_39.1375 . five_prime_UTR 2764 2799 . + . ID=g247.t1.utr5p1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 2764 3657 . + . ID=g247.t1.exon1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 2800 3657 . + 0 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 3912 4037 . + . ID=g247.t1.exon2;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 3912 4037 . + 0 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 4406 4584 . + . ID=g247.t1.exon3;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 4406 4584 . + 0 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 4973 5115 . + . ID=g247.t1.exon4;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 4973 5115 . + 1 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 5270 5397 . + . ID=g247.t1.exon5;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 5270 5397 . + 2 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 5579 5686 . + . ID=g247.t1.exon6;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 5579 5686 . + 0 ID=cds.g247.t1;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . exon 5898 7940 . + . ID=g247.t1.exon7;Parent=g247.t1 NODE_2036_length_7992_cov_39.1375 . CDS 5898 7940 . + 0 ID=cds.g247.t1;Parent=g247.t1;3_prime_partial=true #PROT g247.t1 g247 MMGRKGGASHAASASTAMFRPNESVPSPESATNRPNFKNAHRLHDLMEGMVDGAKAEVATILSGGYLCHDDLNRNLKEFESSRTLQRGFWDGARISPTKSLSPPRRLHRLSPDHSVRHRDGGARLSRVLTSAASTSAYGSSIGTTGVSNTHAANTAAPTPSPRNMGDLTTKSPSSSAGGSVPNSRGPSRLDGDRSGSPSRLNTGIERVDYYDSIFASAALGGYEETAPCGLPQVPVFVNSITRTQQYGRLASFDRRIVQRDKAYERTVLSGAKTNRLVELERAMRSELKGCVGSGLDLLRQRLGVYSFYFSEIMTDFPLFAPLLHDIKIEYDMYVNSLRRQTPDIDALRARLADLLADDVRRNMLKIERRRVRTLEGHLTQLKVENEKLQNDLESERNPSTLQSTNISKMASSMSVSRGDVPMKVTEKIALGASKGTSEPSTASSDDHGAGHILTALQSEVDLNVSEYSREIEELHAEITAHIEQIHKLKAEQKEKFVPVSVKNWLEDALAETEGVARALGLSFNYLGTVPRAGRERVGSIHVDPTGRYLVVQATDKTIEFYVVRSEEEVKRKLARKVRRLKEKEKHKGHTNAAAAAAADEAPERTPALEISHVYTVRASAKVRSMDFIPAPTSVSSGKNAVKARKASGAAEDGAKGDGDGSDSTTLRIAVALNNNRLEVHSVTLTSKSGESELLSAVESGHTADVRAIAISSEDSLILTASHSEVRVWNRKTGACVRTIESGYGLCATFLPGNRHALIGTKTGELQLFDLSAGTLLESTKAHQGAIWSLAVRPDNRGFVTGSADKEVRFWDFELVGGDRLGGGGKRLGFAHARTLKMEDDVLCVAYSPNGKLVCVSLLDSTVKVFVDDTLRFFLSMYGHKLPVTSMDISSDNALLVTASADKNVKIWGLDFGDCHKSIFAHEEGIMSVRFLRDTHHFFTAAKDGLVKYWDGDNFEHISTLESTHLGEAWCLAVAPSGDFVASGSHDRSIRVWERSEEMLFPEEEREREREEQFEADLAKDGDAEQQQRSGDADVAPATKRTAETLKAGELLMEAIDVCDEELLKAAEHARACEDAERVAASTKTKAIVPKPPVPHPLLTASRTESGSAYLLHVLRRIKAADIDDALLVLPFGYVSRLLPRVAEWLRAGREVELCTKCALYLIRIHHNPIVATGALADILEELRVATRRRTTELK # PASA_UPDATE: g246.t1, single gene model update, valid-1, status:[pasa:asmbl_3329,status:3], valid-1 # ORIGINAL: g246.t2 original gene structure, not modified by PASA NODE_2036_length_7992_cov_39.1375 . gene 74 2347 . - . ID=g246;Name=g246.t1 NODE_2036_length_7992_cov_39.1375 . mRNA 74 2347 . - . ID=g246.t1;Parent=g246;Name=g246.t1 NODE_2036_length_7992_cov_39.1375 . five_prime_UTR 2253 2347 . - . ID=g246.t1.utr5p1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 1884 2347 . - . ID=g246.t1.exon1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . CDS 1884 2252 . - 0 ID=cds.g246.t1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 1522 1648 . - . ID=g246.t1.exon2;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . CDS 1522 1648 . - 0 ID=cds.g246.t1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 1176 1345 . - . ID=g246.t1.exon3;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . CDS 1176 1345 . - 2 ID=cds.g246.t1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 855 904 . - . ID=g246.t1.exon4;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . CDS 855 904 . - 0 ID=cds.g246.t1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 74 518 . - . ID=g246.t1.exon5;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . CDS 386 518 . - 1 ID=cds.g246.t1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . three_prime_UTR 74 385 . - . ID=g246.t1.utr3p1;Parent=g246.t1 NODE_2036_length_7992_cov_39.1375 . mRNA 386 2252 . - . ID=g246.t2;Parent=g246;Name=g246.t1 NODE_2036_length_7992_cov_39.1375 . exon 1884 2252 . - . ID=g246.t2.exon1;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . CDS 1884 2252 . - 0 ID=cds.g246.t2;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . exon 1522 1648 . - . ID=g246.t2.exon2;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . CDS 1522 1648 . - 0 ID=cds.g246.t2;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . exon 1176 1342 . - . ID=g246.t2.exon3;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . CDS 1176 1342 . - 2 ID=cds.g246.t2;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . exon 855 904 . - . ID=g246.t2.exon4;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . CDS 855 904 . - 0 ID=cds.g246.t2;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . exon 386 518 . - . ID=g246.t2.exon5;Parent=g246.t2 NODE_2036_length_7992_cov_39.1375 . CDS 386 518 . - 1 ID=cds.g246.t2;Parent=g246.t2 #PROT g246.t1 g246 MSDAEARPASSSSLKRAVEAAKSGSTASLKAAAAADATPARPASSSSLKKAVEAAKSGSTASLKTAVAADKAAGSTASLKGAAAAEKAGSQASLKTSPAKEKSPAKAKGQSVTDRLTDASKFTGAHKERFDESGKGKGLAGREELVNVDGSTSSAARDHTVKSSTAAAAEKKPVVSGNLGKEKFGTQADKPISITLFRNGDKNHAGEKIVPAKFKMFRTMDQLHKEATDIVKLVTGPVRKIYKADCKTQITALDQFENGGKYLCCSGEAPAPADKLPAALTA* #PROT g246.t2 g246 MSDAEARPASSSSLKRAVEAAKSGSTASLKAAAAADATPARPASSSSLKKAVEAAKSGSTASLKTAVAADKAAGSTASLKGAAAAEKAGSQASLKTSPAKEKSPAKAKGQSVTDRLTDASKFTGAHKERFDESGKGKGLAGREELVNVDGSTSSAARDHTVKSSTAAAEKKPVVSGNLGKEKFGTQADKPISITLFRNGDKNHAGEKIVPAKFKMFRTMDQLHKEATDIVKLVTGPVRKIYKADCKTQITALDQFENGGKYLCCSGEAPAPADKLPAALTA* # PASA_UPDATE: g10198.t1, single gene model update, valid-1, status:[pasa:asmbl_9143,status:12],[pasa:asmbl_9148,status:12], valid-1 NODE_742_length_18228_cov_40.22 . gene 156 2851 . + . ID=g10198;Name=g10198.t1 NODE_742_length_18228_cov_40.22 . mRNA 156 2851 . + . ID=g10198.t1;Parent=g10198;Name=g10198.t1 NODE_742_length_18228_cov_40.22 . five_prime_UTR 156 169 . + . ID=g10198.t1.utr5p1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 156 259 . + . ID=g10198.t1.exon1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 170 259 . + 0 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 544 626 . + . ID=g10198.t1.exon2;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 544 626 . + 0 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 810 910 . + . ID=g10198.t1.exon3;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 810 910 . + 1 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 1073 1342 . + . ID=g10198.t1.exon4;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 1073 1342 . + 2 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 1624 1788 . + . ID=g10198.t1.exon5;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 1624 1788 . + 2 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 2044 2139 . + . ID=g10198.t1.exon6;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 2044 2139 . + 2 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . exon 2543 2851 . + . ID=g10198.t1.exon7;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . CDS 2543 2649 . + 2 ID=cds.g10198.t1;Parent=g10198.t1 NODE_742_length_18228_cov_40.22 . three_prime_UTR 2650 2851 . + . ID=g10198.t1.utr3p1;Parent=g10198.t1 #PROT g10198.t1 g10198 MLQISNAVQPDNVIFVLDATIGQAAESQAKAFHDQVTVGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHMDEFERFQTRPFISKLLGMGDVGGLIDLVQDLKLDDNKELIDKLQQGIFTLRDMYEQFQNIMSMGPMGKIMSMIPGFGSDFLTKGGEQESMRRLKRCMTIMDSMTDDELDSDGKMFTTQPTRVNRVSRGAGVHPREVLDLLSQYKKFAQMVKKMGGIKGLFKGGDMSRNVNPAQMSKLNAQMAKMMDPRVLKQMGGMQGIQGMMRQMQSGGMGGLGDMMGAFGGGGGSK* # PASA_UPDATE: g10201.t1, single gene model update, valid-1, status:[pasa:asmbl_9146,status:12], valid-1 NODE_742_length_18228_cov_40.22 . gene 16440 17753 . - . ID=g10201;Name=g10201.t1 NODE_742_length_18228_cov_40.22 . mRNA 16440 17753 . - . ID=g10201.t1;Parent=g10201;Name=g10201.t1 NODE_742_length_18228_cov_40.22 . exon 16440 17753 . - . ID=g10201.t1.exon1;Parent=g10201.t1 NODE_742_length_18228_cov_40.22 . CDS 16440 17753 . - 0 ID=cds.g10201.t1;Parent=g10201.t1 #PROT g10201.t1 g10201 MASFECLPVEVVLVHIIPFLSAKDTTSLAHVSSRLLHCLKHSRVYSLRRRLALRYLQNATFRNSLLATLPRDRMAVDIPSSMQELPSFDLSLLSGMHTVTLFRYKRSAAPTLGRVHTLDLTASTISDVTGLSDVHSLNLSRCCGVHDVSALGKVHTLRLSNCPLVTDVSSLGGLHTLHLSNCPLVFDVSSLRRLHTLWLYGCVNVKDVSALGGVRVLSLSKCVHVRDVSALGRVHTLILFGCTGVVDVSALGHVHALNLGNCLNVSDVSALGSVHNLNLFGCRGVTDVSALGCVHTLDIGDCYRIANVSALGRVHTLSMFRLPSVHDIGALRNTHSLCLKGCTGVVDVSTLDAVHTLNLSGCTSVVDVSALGAVHTLNLSGCTSVVDVSALGAVHTLNLSGCTSVVDVSALVNVRSLDLSECPHIASHPNQALAARR* # PASA_UPDATE: g10200.t1, single gene model update, valid-1, status:[pasa:asmbl_9149,status:3], valid-1 NODE_742_length_18228_cov_40.22 . gene 8037 16193 . + . ID=g10200;Name=g10200.t1 NODE_742_length_18228_cov_40.22 . mRNA 8037 16193 . + . ID=g10200.t1;Parent=g10200;Name=g10200.t1 NODE_742_length_18228_cov_40.22 . five_prime_UTR 8037 8163 . + . ID=g10200.t1.utr5p1;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . five_prime_UTR 8511 8563 . + . ID=g10200.t1.utr5p2;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . exon 8037 8163 . + . ID=g10200.t1.exon1;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . exon 8511 8698 . + . ID=g10200.t1.exon2;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . CDS 8564 8698 . + 0 ID=cds.g10200.t1;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . exon 8875 16193 . + . ID=g10200.t1.exon3;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . CDS 8875 15789 . + 0 ID=cds.g10200.t1;Parent=g10200.t1 NODE_742_length_18228_cov_40.22 . three_prime_UTR 15790 16193 . + . ID=g10200.t1.utr3p1;Parent=g10200.t1 #PROT g10200.t1 g10200 MRVAVVIALLAFVATTCAGAPATVTVNYSGSTKAGLNVITNNEGTSVTFSATVTGGTSPYTNLWQISNLHGVSTFTDLSTTHPLVRDSNILFTNPSSGATATIQLQSAYATYEKYRFRLKSTDNGGNVGVSDPFWFRYNTTSLQILQNSQSSVSSTKKFSVFWNPPDMDADYPAFKRDLIRISKSNTQASQFLAVRRFTATDPISGDPIFVNELEAPAAATVDSYWTVVSDYVTLTFDGASSDGSDLEGWIQAGVEAACVVANPGKAFRAYFQGYISSVGSTRVTVYVRNYNTGTIMTKASLISALTVGSGLGTFASGVSGAGLPFTTYSVSGETFSTFLSTENFFLQVTSDGTLTLAWAPYVVTADADSFLFNVLPSADAIAYTEAAAFVGGDRFRIQSVRAPTKYVGITTGSVVTLLTNATDPQGLFVRSSSDVTFLTDTPKTDTWAGSRCATNKLESTAGSQVAQNVDDCAQLPDNPTYRRLEIDLGGEFFVTTVSITMPNRPFALEGDAEPFTIVGVSLWGKQRDASTFIQLNQTLTTSTCSSATSTCTFTFAVGTFSRTKLKLPGNRGFRWLRLIFDGMDVFNDRVPESARYFALSDVAVTGNCLCNGHSKFCNLQTAACTEYDTTGSTDSLAKTCSHNTRGLNCDECDFANNVYINPRNKPPTDAYNCNDDGTNCDGPKLPEYNPTEIEARNSGGKTIAANNFLFFQLMFPQGPCIPCFCYGHNELEVGVSDKSCNAFSGVCTCASTAHNVTGNSCENCVQGWCRNCNSTDPATRESCRLNSCSLCNCNQHSTTTTGSGADLCNPDGCGCTCKEGDHVEGAHCENCKKGYFNTFGNGLNGRVCNACECNGHKAPESNECEANGGSCMKDKDGNAQPCHGNTEGDHCQYCKPGFYRPIPEGKLTVNLTDDCIPCSCNQHGDAKSYTGLLAGTAICDPEGGVCNCKASDHVEGDNCEKCVKGYWSAPGDGKDGVSCTACTCNGHKATSGNECEAKGGNCMNDYSGSAQPCEDETQGSSCDECKDGFYRECQNNNGYPVIVGLSKTCTVAPTQGCVACGCNGHHPNTVPDTVNDPLCEKVGGDCPGCLDNTEGAFCENCKPNYFNEVGDGKDSRKCEPCACYNHSSTCNSTGWCSGCGDNTRNGGLGKCDLCEASYKRDRTLHSTYDMSIPADVDNIRFEKCSSCNCNTHSTRDPTVDDGICEEINGHCYDCGGHTVNGDTFECERCESGYFRNLDAIPDTCTTYDSSKFVYGHNNTARTLESDCLPCDKQCFGAADECTETTGECTDCDDDNATGVRCEVCAAGYFGSPADGIPCRPCRCYHSVDSTFASVTAEVITDALRCQLDAGVSRKCFLNMTIADSLDQSRLKDVNDDLIYTAIQCACPREPVPFGGQFNKTDGTIYYGATCDKCNNAAYYGKPTLCETDAAGTLATCSSFDTCNPCNCNGNIDQSQAITNCLPSTDDPQCKNCLGHTTGDKCQNCETGYYGDATRQDVAGEQGTGYVLDNSGDSLKCFKCDCNGVSVTRFNGLDGIAGDVCESAGSNNEGNYTCTCDESRGYTGAKCRKCKRGYQLKTGYNATNFADPLYDYCEPCPQCVLDVYTFSIDPLESGMKVLESDVVAVNSSIQAVIDSTANILSAVASVKTGLDNSLSSIAQSLTNADNDLTSSLNVIASNLADQRADLTAHLAQQASDITNLGNAVTTLAAAVANAKTVLENNIANLQSDESALSDRANDLSDATTNLQTTVSNALTALTTAASSLSSKVDDIQEELQDASDSVAATIAALELRIGNGSIDVTDFGNNVENRRQALLDELAELKTKIDDAVDTFDNKFTLLDARITASVAELEQYITANSDRITSLATAAAAAEARADEVKTAVDGQKDAVAGALDTLRANITAQVAALSSAVDAADEALTNKVSDVIDALSFATRAIEDKLIEDLWPTTGQADLSDFQNVPNVVSSLNGGAAVLCGRGGSGSAIVLPGRNNSYGIIPAASAFSDLSSGITVSVWVRQAVNNDGYILSKSTATGATRYFSLWSEGSRNRFHLFFLPATSTTGYRQSTITLTTPIDDNTPHHVVVVVTSTVIPRAFLYVDGVQVGEFPNIVQMTEKTGLSMYVGARAPIAFTFNGTLDQLHIHPRDLSGKDIVRIFNMASVADSPVAFTLVEAPTHFNQTAQSPIITYAPTAEGFVTPVTGFTLSAWVKQAPSDDAYIFSKADAATGNQRSYSVYLSSLSSELGIYYRTLNTTNWRYIKGADVNIADDKFHHIAVTVDRTNAAFYVDGVLRGTGQLAGIITDDITQSIYVARRPQSPKQMLTGSLSRTRLYFNQALCESSIKTFFAEGSGSS* # PASA_UPDATE: g10199.t1, single gene model update, valid-1, status:[pasa:asmbl_9144,status:12],[pasa:asmbl_9147,status:12], valid-1 NODE_742_length_18228_cov_40.22 . gene 3627 7148 . - . ID=g10199;Name=g10199.t1 NODE_742_length_18228_cov_40.22 . mRNA 3627 7148 . - . ID=g10199.t1;Parent=g10199;Name=g10199.t1 NODE_742_length_18228_cov_40.22 . five_prime_UTR 6844 7148 . - . ID=g10199.t1.utr5p1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 6799 7148 . - . ID=g10199.t1.exon1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 6799 6843 . - 0 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 6620 6664 . - . ID=g10199.t1.exon2;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 6620 6664 . - 0 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 6431 6487 . - . ID=g10199.t1.exon3;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 6431 6487 . - 0 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 5060 6017 . - . ID=g10199.t1.exon4;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 5060 6017 . - 0 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 4370 4735 . - . ID=g10199.t1.exon5;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 4370 4735 . - 2 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 3987 4102 . - . ID=g10199.t1.exon6;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 3987 4102 . - 2 ID=cds.g10199.t1;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . exon 3627 3692 . - . ID=g10199.t1.exon7;Parent=g10199.t1 NODE_742_length_18228_cov_40.22 . CDS 3627 3692 . - 0 ID=cds.g10199.t1;Parent=g10199.t1 #PROT g10199.t1 g10199 MAASPKTKMSVPTVMADDAVDLDAILKEEPPPARPSKRRPSADASNYDRLDVSGANASPSPTSQRARGSTVNAKRASMLAATVMELFEAQGAPVQLGTAPLKQATARARNQSAHPTAASIFAPNGSTGGDGDSASMRSDTHSHHSHHSGYGQQGSGSGSVSTSPRMSHQGSTDRPNAIAIAAATAASGGGGADTASLLQVSSGAAIGAGIRQSRSGNVALRDAQPHGGSYRTPAASAAGGHHDHDEGARLAKEMILAAAKNDQKVMVALLSEHKGLAHVHEIMTGYTPLHWCAKNGNKQLVLLLLSCGAPVNARSHGGYTPMHLAAMHAQGGCTSALLEAGADSKAMCNNGRTPCDLARGGMVNFLLNGTPRAAAAPAASATASTESETPDTKMAKRASFSLLSRNKSHATISGASGAAVAAMLAAQNTETDRSRELTRRGSVTSASSASAAGGGGDPAGDPALMSSHDRRAYSISILKSKSAGRMSQAVAAASSSSSGTSGSVRRQTSNASVSSNMSTVSAPPTDGVTRKPLVSGDVAPVLELEESSEV* # ORIGINAL: g10809.t1 original gene structure, not modified by PASA NODE_3386_length_3576_cov_31.8829 AUGUSTUS gene 2 733 . + . ID=g10809;Name=g10809.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS mRNA 2 733 . + . ID=g10809.t1;Parent=g10809;Name=g10809.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 2 279 . + . ID=g10809.t1.exon1;Parent=g10809.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 2 279 . + 2 ID=cds.g10809.t1;Parent=g10809.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 617 733 . + . ID=g10809.t1.exon2;Parent=g10809.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 617 733 . + 0 ID=cds.g10809.t1;Parent=g10809.t1 #PROT g10809.t1 g10809 SALVQTNTGAFEHGVFRAPSGDLIPQGDPLLGQVTWASWTSVLGDEVLGIWPKGAEANDVNAVDLTRGGDRIAMGDDFGFVRLFDFPCRDKFAKHKKYIGHSAHVTNVKFTHDDSFLLSTGGDDTWWVWD* # ORIGINAL: g10810.t1 original gene structure, not modified by PASA NODE_3386_length_3576_cov_31.8829 AUGUSTUS gene 1657 3481 . + . ID=g10810;Name=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS mRNA 1657 3481 . + . ID=g10810.t1;Parent=g10810;Name=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 1657 1727 . + . ID=g10810.t1.exon1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 1657 1727 . + 0 ID=cds.g10810.t1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 1972 2182 . + . ID=g10810.t1.exon2;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 1972 2182 . + 1 ID=cds.g10810.t1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 2471 2544 . + . ID=g10810.t1.exon3;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 2471 2544 . + 0 ID=cds.g10810.t1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 2684 2759 . + . ID=g10810.t1.exon4;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 2684 2759 . + 1 ID=cds.g10810.t1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 2945 3079 . + . ID=g10810.t1.exon5;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 2945 3079 . + 0 ID=cds.g10810.t1;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS exon 3344 3481 . + . ID=g10810.t1.exon6;Parent=g10810.t1 NODE_3386_length_3576_cov_31.8829 AUGUSTUS CDS 3344 3481 . + 0 ID=cds.g10810.t1;Parent=g10810.t1 #PROT g10810.t1 g10810 MSAQHCSVRAVFVVTPAGQVVYSRKYPTVERRALREGGDAYTRVPSDADFGGLLLRECRPEGEYDSLLQFSRANYPPVYGIDDGRVWPVLVMQRRGYFYVTIPLVGAKLALPRPPLVELPVITMAAVLLNDVASLGTLLLASGNLSAAFDELHDCLSLGMPFGSPIDTTSTNLRALLQAKSIPNVSAEKQPVWKPVPFKGKNALSFTVTEHIRAVQYDKPDVVDTWDVYGTVKCK # PASA_UPDATE: g7176.t1, single gene model update, valid-1, status:[pasa:asmbl_2545,status:3], valid-1 NODE_175_length_33439_cov_41.4465 . gene 96 1283 . + . ID=g7176;Name=g7176.t1 NODE_175_length_33439_cov_41.4465 . mRNA 96 1283 . + . ID=g7176.t1;Parent=g7176;Name=g7176.t1 NODE_175_length_33439_cov_41.4465 . exon 96 209 . + . ID=g7176.t1.exon1;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . CDS 96 209 . + 0 ID=cds.g7176.t1;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . exon 413 532 . + . ID=g7176.t1.exon2;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . CDS 413 532 . + 0 ID=cds.g7176.t1;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . exon 826 930 . + . ID=g7176.t1.exon3;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . CDS 826 930 . + 0 ID=cds.g7176.t1;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . exon 1163 1283 . + . ID=g7176.t1.exon4;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . CDS 1163 1231 . + 0 ID=cds.g7176.t1;Parent=g7176.t1 NODE_175_length_33439_cov_41.4465 . three_prime_UTR 1232 1283 . + . ID=g7176.t1.utr3p1;Parent=g7176.t1 #PROT g7176.t1 g7176 MHMVGAVGLALGCAINALSGFIYLGIALFAAPMFLIRYWAIYGISVAPLRTYWVWMFFIPGILFSVLAFVIIGALQNDSNYEYTHSAWHVTIAMAACLLILAVPKDFVKQASAMDYELLVPERLRVAKSEVSVIV* # PASA_UPDATE: g7181.t1, single gene model update, valid-1, status:[pasa:asmbl_2546,status:3], valid-1 NODE_175_length_33439_cov_41.4465 . gene 9591 17266 . + . ID=g7181;Name=g7181.t1 NODE_175_length_33439_cov_41.4465 . mRNA 9591 17266 . + . ID=g7181.t1;Parent=g7181;Name=g7181.t1 NODE_175_length_33439_cov_41.4465 . five_prime_UTR 9591 9885 . + . ID=g7181.t1.utr5p1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 9591 10002 . + . ID=g7181.t1.exon1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 9886 10002 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 10309 10473 . + . ID=g7181.t1.exon2;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 10309 10473 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 10854 10902 . + . ID=g7181.t1.exon3;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 10854 10902 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 11054 11112 . + . ID=g7181.t1.exon4;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 11054 11112 . + 2 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 11374 11464 . + . ID=g7181.t1.exon5;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 11374 11464 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 11673 11745 . + . ID=g7181.t1.exon6;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 11673 11745 . + 2 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 12080 12137 . + . ID=g7181.t1.exon7;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 12080 12137 . + 1 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 12384 12602 . + . ID=g7181.t1.exon8;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 12384 12602 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 12777 12914 . + . ID=g7181.t1.exon9;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 12777 12914 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 13115 14194 . + . ID=g7181.t1.exon10;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 13115 14194 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 14597 15031 . + . ID=g7181.t1.exon11;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 14597 15031 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . exon 15255 17266 . + . ID=g7181.t1.exon12;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . CDS 15255 16832 . + 0 ID=cds.g7181.t1;Parent=g7181.t1 NODE_175_length_33439_cov_41.4465 . three_prime_UTR 16833 17266 . + . ID=g7181.t1.utr3p1;Parent=g7181.t1 #PROT g7181.t1 g7181 MASKGKVKFSPHVIRGIDPATVWDLISVLGDGSFGQVWKGKNKKTGLLAALKIIQVESLEELEDFQVEIDILKNCDSPTIVKLHDAYFHKDSLWLALEYCGGGALDSIYNDLEHPLSETQIRAISHQMLKALHYLHTHKVIHRDIKAGNVLLTDSGEVKLADFGVSALNKSTLQKRNSFIGTPYWMAPEVINCETNKDMPYDYVSDIWSLGITAIEMAQMNPPYHEMHPMRVLFKIPKSEPPKLESPSLWSPEFADFLAQCLIKDPKKRPTAIMLMQHPFVKEWGSSEPIVELLRLYKAPVTQEIKDIDSKTKAEVTTETNIEVKTLTAEEAAIAKARSEAESAAAEAREREAAAAAAQAREREAAAAAAAAAAAAATTHAADPAVSKRASLVDVAPPTKRGSIAEGMAAPGKRTSVVEAHAAESQPPSLSGSSSSAAMADAISGGGISRNRPPSIHESSLPMNFTRRASVNQAEKPSPAVIGLGVASVKEEAEGASPLPAKATAPVAAATTATAAQATVVPTPASAPAPAPAEAPQPIAAPVAAAAAAAAASSTTANASTATSTPKVEVAKAIPGHLQTAPTSAVDMTPPASPMVLSVPSSGHQRSRSIENLEEITLEPLRNRLGSDNPSSPPRDRTSKTDEDLRPKFATMTRTRMVEVGGQMVKVTTSKVINKEDADNAEKVKELRKQQLRAIKVLQRTEHKEYTEVVKRQEAERETLARHDFRETEVVERRQAGDVDSLIKQNRRDIERFEADQFAELKLFIKRQVTEEKASYKRFRDDLIASKKRERDDFKKNLKAKGKEREARKKEFDMAQTAKMEEEDFDYQKRQAAKSRENLIVFQRQQIADHRRKELEFLTTAQRIREGHLGARCDMENTQLSTRQRMGLSHLTERLTVQKKHQSDRHEIEREQMRTLIRLRESELVKRQMSDRKRLPKQQKLESKEHLREYEKVRTKEREQLRDGFKRRTASNPPADPKIAKRDLLEQEKKMLEEMDREYAQKETARMTEELRLHEIQLEAELEVRRKADAAEVEELAMVHELKEESLRESEERQMTELAEKLEAEKRQLRERHERMRVELQDLFARENAELEDKYASGNYNPMARMSPGSVRKLHSRQSVADPLDPDYENGTLKLKGGDSRFGSVSSIASRPSVRPSVLGAFEGGDSMSSTPSSAPSSVSRATSLGITGSTDPSRQSLTLERAASAPVAANNAQARPVSMAVSGQAPGQAAAAHQRPVSSAAPPTNGKSLTHVISEEGGSFIAAAAAIVSEQKTTIERRVSDPPSTSSATPAIRVDAPKRDSVSSNGSGTGSVSGSLGHKGDAATGSNGKLDVLNLRQRTDSNLSEVSQETEI* # PASA_UPDATE: g7183.t1, single gene model update, valid-1, status:[pasa:asmbl_2548,status:3], valid-1 NODE_175_length_33439_cov_41.4465 . gene 19011 20772 . - . ID=g7183;Name=g7183.t1 NODE_175_length_33439_cov_41.4465 . mRNA 19011 20772 . - . ID=g7183.t1;Parent=g7183;Name=g7183.t1 NODE_175_length_33439_cov_41.4465 . five_prime_UTR 20443 20772 . - . ID=g7183.t1.utr5p1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . exon 20421 20772 . - . ID=g7183.t1.exon1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . CDS 20421 20442 . - 0 ID=cds.g7183.t1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . exon 20137 20310 . - . ID=g7183.t1.exon2;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . CDS 20137 20310 . - 2 ID=cds.g7183.t1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . exon 19876 19979 . - . ID=g7183.t1.exon3;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . CDS 19876 19979 . - 2 ID=cds.g7183.t1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . exon 19583 19696 . - . ID=g7183.t1.exon4;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . CDS 19583 19696 . - 0 ID=cds.g7183.t1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . exon 19011 19401 . - . ID=g7183.t1.exon5;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . CDS 19093 19401 . - 0 ID=cds.g7183.t1;Parent=g7183.t1 NODE_175_length_33439_cov_41.4465 . three_prime_UTR 19011 19092 . - . ID=g7183.t1.utr3p1;Parent=g7183.t1 #PROT g7183.t1 g7183 MDRRYHRGVTCDGCAESDFAGVRHRCLACHDYDLCHSCFQAGVTTRSHAESHPMEEVPVRRNAKDAMRLSCPFCEAVGLIEEAFVAHVIQAHSDVSQAPMVCPICSSKSAYNASSCTETTFFEHLWLVHQTRPFLTEQVDAPATPKQRHHGGTSLTALESASSPLSRSMSLRNAGGSHTIHAHAHDSTQADPHQPGSPGTLYPHSGAHSHGNGGAPPDTALRGMFARDLVFAMLLGDDAW* # ORIGINAL: g7179.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 7080 7488 . + . ID=g7179;Name=g7179.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 7080 7488 . + . ID=g7179.t1;Parent=g7179;Name=g7179.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 7080 7101 . + . ID=g7179.t1.exon1;Parent=g7179.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 7080 7101 . + 0 ID=cds.g7179.t1;Parent=g7179.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 7304 7488 . + . ID=g7179.t1.exon2;Parent=g7179.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 7304 7488 . + 2 ID=cds.g7179.t1;Parent=g7179.t1 #PROT g7179.t1 g7179 MAAQPTPADKIHPPIVGKVTDTTIELYWKLRIEEEMNIVRIVVQEAEENSQTFNTIYRSVSHRYSSMM* # ORIGINAL: g7178.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 4013 4744 . - . ID=g7178;Name=g7178.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 4013 4744 . - . ID=g7178.t1;Parent=g7178;Name=g7178.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 4013 4744 . - . ID=g7178.t1.exon1;Parent=g7178.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 4013 4744 . - 0 ID=cds.g7178.t1;Parent=g7178.t1 #PROT g7178.t1 g7178 MNTGIKLRRRVYFADSIGLSLTKCKEFGRSDRPVSISSDENASDDDEPLSDAPAPSPKNTVAAPSLRKFLSPTFQQPACTLNFYQRVAKHHVSLENVITRESHLIGTVIVENLAFEKSVFVRYTSDGWKTHAEVAATHAMSVRGGAFDRFSFLCQVPDDFPAGGLAEFAVRYEVGGQTYWDNNGGINYKVQCFSYSSTFTSFLELEQQLVREPPRSATVDALLFEPPRTYPRLPRAEQIIISI* # ORIGINAL: g7185.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 31079 33338 . - . ID=g7185;Name=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 31079 33338 . - . ID=g7185.t1;Parent=g7185;Name=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 33223 33338 . - . ID=g7185.t1.exon1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 33223 33338 . - 0 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 32906 33098 . - . ID=g7185.t1.exon2;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 32906 33098 . - 1 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 32451 32780 . - . ID=g7185.t1.exon3;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 32451 32780 . - 0 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 32153 32341 . - . ID=g7185.t1.exon4;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 32153 32341 . - 0 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 31681 31963 . - . ID=g7185.t1.exon5;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 31681 31963 . - 0 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 31333 31462 . - . ID=g7185.t1.exon6;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 31333 31462 . - 2 ID=cds.g7185.t1;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 31079 31136 . - . ID=g7185.t1.exon7;Parent=g7185.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 31079 31136 . - 1 ID=cds.g7185.t1;Parent=g7185.t1 #PROT g7185.t1 g7185 MRSLANALSRTHLSHTGGRVEFLPIQWHDALHVDGGVDSKLRQITLDSIRRLREFINDTILDVLFFTSPPYCQMILDKVALELNALHALFRKRNPNFRGGVSIVGHSLGSCIAFDILAHQVSSLPPAARASVSAEAPTLGGALSPADQQPITAPSAHHASASLDPPATPPRPEPSILSPSPSFGSPLPLDSSPGASYDRTAGGDIDLAATKKKFLSKTKRLQHQTSRVKNEALSVVYPQLDFSVDALFALGSPIGLFLTVRGHDGIAADYSLPVTKSVYNIYHPFDPVAYRIEPLVDPSAAAEKAVLVPHHKGRKRMHIEVKENLARLGENIKKGLVTSVMSGWSSLSRVIGSAPQPTPEADVPIQSDICDPPAKVVGCGNLNGGRRIDHVLQEKPIESFNEYLFSLGSHFTYWKSEDTVLFVLRSIYGEEI* # ORIGINAL: g7184.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 21243 30948 . + . ID=g7184;Name=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 21243 30948 . + . ID=g7184.t1;Parent=g7184;Name=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 21243 21310 . + . ID=g7184.t1.exon1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 21243 21310 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 21485 21623 . + . ID=g7184.t1.exon2;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 21485 21623 . + 1 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 21775 21918 . + . ID=g7184.t1.exon3;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 21775 21918 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 22056 22220 . + . ID=g7184.t1.exon4;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 22056 22220 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 22401 22574 . + . ID=g7184.t1.exon5;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 22401 22574 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 22700 22823 . + . ID=g7184.t1.exon6;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 22700 22823 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 23163 23272 . + . ID=g7184.t1.exon7;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 23163 23272 . + 2 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 23440 23643 . + . ID=g7184.t1.exon8;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 23440 23643 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 23774 23968 . + . ID=g7184.t1.exon9;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 23774 23968 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 24070 24255 . + . ID=g7184.t1.exon10;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 24070 24255 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 24403 24549 . + . ID=g7184.t1.exon11;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 24403 24549 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 24729 24934 . + . ID=g7184.t1.exon12;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 24729 24934 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 25099 25207 . + . ID=g7184.t1.exon13;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 25099 25207 . + 1 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 25343 25408 . + . ID=g7184.t1.exon14;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 25343 25408 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 25499 25693 . + . ID=g7184.t1.exon15;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 25499 25693 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 25827 25991 . + . ID=g7184.t1.exon16;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 25827 25991 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 26213 26504 . + . ID=g7184.t1.exon17;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 26213 26504 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 26611 26732 . + . ID=g7184.t1.exon18;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 26611 26732 . + 2 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 26925 27508 . + . ID=g7184.t1.exon19;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 26925 27508 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 27677 28435 . + . ID=g7184.t1.exon20;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 27677 28435 . + 1 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 28599 29127 . + . ID=g7184.t1.exon21;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 28599 29127 . + 1 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 29275 29952 . + . ID=g7184.t1.exon22;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 29275 29952 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 30123 30276 . + . ID=g7184.t1.exon23;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 30123 30276 . + 0 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 30428 30593 . + . ID=g7184.t1.exon24;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 30428 30593 . + 2 ID=cds.g7184.t1;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 30786 30948 . + . ID=g7184.t1.exon25;Parent=g7184.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 30786 30948 . + 1 ID=cds.g7184.t1;Parent=g7184.t1 #PROT g7184.t1 g7184 MAKRKRDASADEAAPTRNKAPRGSDDGVPSSVKASGDGEGAFPRGGGMSLTPLEVRNIREEAKREALFEESNQSGKAKAKKLRGKKAAPLKDDANDDGEDVLDDAIARKSADVLTSKRIAAGMLVLGAVREINDFDMAVCLPDGLVGFVKATDISDPLNEALMKEAEKDDDEDGSAGTDLRSLFRVGQLVRASVTADDESDSSRNRRVQLSLNPSLVNATVDPAAVVKGMTLSGAIHSIEDKGYVVSFGTDKFKGFLLRKNAASYIAGHKQGRNLSVGELVECAIVSMNVATKVASVTIDPTEVAGATLPADASVPLAAIQPGMRVDVTVASAFRNGLELEFLGVFRGTANLSHLASPVANADDLAKIYKPSPKKKYPARILHVNAAAKSVSLSLRSAIVEDRIDLGSFTLGETATATVVRVDGGVGVLLKDERDRYGYCHVSRLSDVRVEKIGAKYAQGTVHSMRVLGSALLEGVAQVSLEKSVLEKPFVSYEDIAVGAVVKGTVITVEPFGMLVQVTDHIRGLCPALHLADVPTQKASKKLKEGAEVECRVLSVYPQRKRLQLTHKKTLVTSDLPIIQSFESATPGMMTHGVITAMRTFGCIVTFYGGVRGLIPTRELSNERIVDPAAMFYLGQVVKCRVLNSSPADKKMTLSLRLPSSGSDANAQQRPTATHQIGDIVPVTVDAVVANTLHVTTAAGVPGVIEMAHMSDHASHCQRLLALYGRPGTAIARARVLDRDSKRIALTLKASLLTDESSACTKQADLAVGAAMHGYIRALMPYGCFVAFPYGIVALSPLASVRAVVTEVGSNGKALVSLKPSVAGPVCSAHLEALFAEGAELARGGPVSRNAAARTFLAGCRVGAIVEGEVDSVKDFGTFFKISADVKGFATNEHLNGLTLRMGDKVRCFVVDIDFENGVLDVSLKQELVDSVKKAKKGDAYARLSHKDASQLDAVVELVKEDYLVLSVPTLPGVLGVAAPNLHNDLAKPFLRFKCGQRVRASVLCVLAPKENVAWRLILSHSAAVPDVRVGRKGATAGDDVSVGATVSVTVKAAKDLQLNVVGPGGLKGRIHVTEITDAPPSGCDVLATHAVGAVVSAKLIGFHDSKSHTFLPVSRTVSGVKPMAEFSTRESVLALPDPSTGPERLSIASLIVGEIVNGFVQEVLPDCLWVAVSVVTRGRVMALDASLDVAVVGSLLSHFKAKQAVRCRVIALDAQKGTLDLSLTHVDGTNPEAAVGDVVPARMSKAIPHVGLTVQLPGGLFARVAITDISDDYAQNPLAEYTPNRLVTACVVSVDGGKLAASLRPTRVAGAAPGRDAEVASSADVAPGQLVRGYVKAISESGCFVAIGRDAVARVIIANLSDSFIRDWKTVFAPGHLVSGRVISNDNGKIELSLKKSAVDPEAFGKQLTLANIEAGMKLRGRVRKVETFGVFVAIDNSRLSGLCHVSEVADGFVKDLSKAFAVGDRVKALVLKVDRATKRVSLGMKPSYFTDDTSDDDVSGDDANGDGNAVKGNGDANGNEDDASAGSEDAESSAESESDDGEGSEGSDDAMEVDGLSDEDGDSGSDDALDDDDIEGLIVTEPAPDQTSRKRRRDSDSGDAPRLKVAGGFDWSTGAAAGSGAADGADGESSGDSEDEDGDGDDATGSARRSKRARKALRKDEEERIAEEEVAIGGGNRAPETAADFERLLLGSPNSSYLWIQFMAMHLAMTEVDRARGVARDALARIAVREEAERLNVWVAWMNLENAYGTDESLAGIVKRALEAAEPKKVYAHLAQIYDRSGKHEEAERVHQTLCKRFRESRKSWINYGLYLFVRGNAEGARHVLQRSLKSLPKRKHIPTIIKFAQLEFKHGEPERGRTMFESVLSNYPRRNDVWSIYLDMEAQQGDANIIRNLFERVIHLHLSTKKMKPFFKRYLDYERDHGTEASVELVKRKAREFVESKMQE* # ORIGINAL: g7177.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 1451 2999 . - . ID=g7177;Name=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 1451 2999 . - . ID=g7177.t1;Parent=g7177;Name=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 2056 2999 . - . ID=g7177.t1.exon1;Parent=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 2056 2999 . - 0 ID=cds.g7177.t1;Parent=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 1772 1914 . - . ID=g7177.t1.exon2;Parent=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 1772 1914 . - 1 ID=cds.g7177.t1;Parent=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 1451 1680 . - . ID=g7177.t1.exon3;Parent=g7177.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 1451 1680 . - 2 ID=cds.g7177.t1;Parent=g7177.t1 #PROT g7177.t1 g7177 MAHPSVFATLALGPPDPVFGMSAACEKDPNPNKINLVIGAYRTEENKPWVLPVVHKVEAALAANTALTHEYLPIDGLPVFTQAASRLVLGADSPAIAQGRVYAAQTLSGTGSLRAGAEFLAQFYPGKKTIYISNPTWGNHHQIFGNAGIAVKVYRYFDSKTNGVDFAGMMADLTAADEDSIVLLHACAHNPTGADPTAEQWAQIADLCTARRLFVFFDIAYQGFASGDPDKDAAAVRMFVSRGMECFVAQSFAKNFGLYDERAGCLTAVVSSAAAVEPLRSQFKSLVRASYSNPPAHGARVVATVLGDAELTSEWHGHLKEMSGRIAAMRDLLLAALVQRKTPGDWTHVKKQIGMFSYTGLSACSKHCAAGGVAVLSLSDEVLCPLRRAAAQCEALMSRHSVYLLKSGRISMCGVTRANVERLADAINDVVVNPPVSS* # ORIGINAL: g7180.t1 original gene structure, not modified by PASA NODE_175_length_33439_cov_41.4465 AUGUSTUS gene 7885 9038 . + . ID=g7180;Name=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS mRNA 7885 9038 . + . ID=g7180.t1;Parent=g7180;Name=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 7885 8191 . + . ID=g7180.t1.exon1;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 7885 8191 . + 0 ID=cds.g7180.t1;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 8311 8436 . + . ID=g7180.t1.exon2;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 8311 8436 . + 2 ID=cds.g7180.t1;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 8606 8700 . + . ID=g7180.t1.exon3;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 8606 8700 . + 2 ID=cds.g7180.t1;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS exon 8820 9038 . + . ID=g7180.t1.exon4;Parent=g7180.t1 NODE_175_length_33439_cov_41.4465 AUGUSTUS CDS 8820 9038 . + 0 ID=cds.g7180.t1;Parent=g7180.t1 #PROT g7180.t1 g7180 MLSPEDLYRAIANDDLEVIRTIVDSGAVDLNTVDKYGLSPLMYASTKGKESAIDMLLEGNADINFANKSGKTALMLACFYGKTDTCRLLLKKKANPNLKDRGGCSCLHMAVDSGNIECVRLLLSSGCSVHAKEGKAGWTPFMRGVSIGVTEPMLAALLDAGTEIDKADNDGNTPMMLAAFRGHLHVVKYLIARGGDVNRESPLGTTALDFARSFKRQQIVDVLLPLTDPSKVDRYDRNERRRSLVDTS* # PASA_UPDATE: g7182.t1, single gene model update, valid-1, status:[pasa:asmbl_2547,status:12], valid-1 NODE_175_length_33439_cov_41.4465 . gene 17268 18879 . - . ID=g7182;Name=g7182.t1 NODE_175_length_33439_cov_41.4465 . mRNA 17268 18879 . - . ID=g7182.t1;Parent=g7182;Name=g7182.t1 NODE_175_length_33439_cov_41.4465 . five_prime_UTR 18846 18879 . - . ID=g7182.t1.utr5p1;Parent=g7182.t1 NODE_175_length_33439_cov_41.4465 . exon 17757 18879 . - . ID=g7182.t1.exon1;Parent=g7182.t1 NODE_175_length_33439_cov_41.4465 . CDS 17757 18845 . - 0 ID=cds.g7182.t1;Parent=g7182.t1 NODE_175_length_33439_cov_41.4465 . exon 17268 17644 . - . ID=g7182.t1.exon2;Parent=g7182.t1 NODE_175_length_33439_cov_41.4465 . CDS 17471 17644 . - 0 ID=cds.g7182.t1;Parent=g7182.t1 NODE_175_length_33439_cov_41.4465 . three_prime_UTR 17268 17470 . - . ID=g7182.t1.utr3p1;Parent=g7182.t1 #PROT g7182.t1 g7182 MLRLKAALGVGKSTSRASSDSPAVAWLDTANRSLAQQVEVLSRQCELWEAECAALEASHAHEMAVAADNAESLQRALCEEREMLKRISGGTSVGVIVSELKARCATAEAQLVDARSQAAEFATALAERDRADATPVAAARDSSVSPSPSSVSSQHMAALEAARMGLEQLVEDQGLQLDRLTGELAATLRRHALDAQEMTDKADIAQRRIAQLEAELADKGRTESKEKCHAGGSADSARALEIRVEVLQEALDAERRANDKAEAARAVIETQLRDVKMQLEDAEERIRGRGSSSAATFQVTLQDMESNLEEEAERCEDAMRTARRLEKRCRELASSVDEKERLLTEQRLLTDKMSSKVDVLKQKLSLHEEALERSNQSKRKIARDFDEQTEKLVSLETEIRQLRGKVRRQVRAAQNADDSD* # PASA_UPDATE: g14083.t1, single gene model update, valid-1, status:[pasa:asmbl_2847,status:3], valid-1 NODE_1866_length_8829_cov_42.2279 . gene 5101 8640 . + . ID=g14083;Name=g14083.t1 NODE_1866_length_8829_cov_42.2279 . mRNA 5101 8640 . + . ID=g14083.t1;Parent=g14083;Name=g14083.t1 NODE_1866_length_8829_cov_42.2279 . five_prime_UTR 5101 5280 . + . ID=g14083.t1.utr5p1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . exon 5101 5484 . + . ID=g14083.t1.exon1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . CDS 5281 5484 . + 0 ID=cds.g14083.t1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . exon 5672 5843 . + . ID=g14083.t1.exon2;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . CDS 5672 5843 . + 0 ID=cds.g14083.t1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . exon 6214 6406 . + . ID=g14083.t1.exon3;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . CDS 6214 6406 . + 2 ID=cds.g14083.t1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . exon 6811 6967 . + . ID=g14083.t1.exon4;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . CDS 6811 6967 . + 1 ID=cds.g14083.t1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . exon 7407 8640 . + . ID=g14083.t1.exon5;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . CDS 7407 7943 . + 0 ID=cds.g14083.t1;Parent=g14083.t1 NODE_1866_length_8829_cov_42.2279 . three_prime_UTR 7944 8640 . + . ID=g14083.t1.utr3p1;Parent=g14083.t1 #PROT g14083.t1 g14083 MASVAVPVAAGAPVVPGIRAQPLAPKAALNTIEAQNIFAIIEDCVEQLAVLEGISPQGGDGHQDMSELVGDEVSRIIEEQRRTESRYDQALDKRNDQKTQFAKKKKAENDNDVEDIARELRQSTKALVRNLKQNPKVAENIHKVKAERASLESLMEKTLDELEAKAYETMIRIVNEERERKIVLQQTIAREKEASAIVKGLQKELLEEKKQREQEIQTLNEAIAKFKDHLQEIKAKTSMDGKYMAKESQMRVQCLQKKFQWREASLEEERTQLQEKLELELRVNRDIEAYLKRYQEDLEGRIQFWMNKYDVDVESKQKELDSIKSSRAADLVRLQELTEKYNKYAAVVDDDRRIKEERKRQAEEAEKQSKAAVKIQAWWRGVRTRKELRSGSAKKKRGKSGKKSAKKSGGKKGGKKAAKK* # ORIGINAL: g14082.t1 original gene structure, not modified by PASA NODE_1866_length_8829_cov_42.2279 AUGUSTUS gene 533 2287 . + . ID=g14082;Name=g14082.t1 NODE_1866_length_8829_cov_42.2279 AUGUSTUS mRNA 533 2287 . + . ID=g14082.t1;Parent=g14082;Name=g14082.t1 NODE_1866_length_8829_cov_42.2279 AUGUSTUS exon 533 2287 . + . ID=g14082.t1.exon1;Parent=g14082.t1 NODE_1866_length_8829_cov_42.2279 AUGUSTUS CDS 533 2287 . + 0 ID=cds.g14082.t1;Parent=g14082.t1 #PROT g14082.t1 g14082 MSFGSFFSAASDSVPQVQRLREDQVANNAGGFVWKVDDLCRLRRFICLGTESGSYYNSSRELTVDNLGSVKALIDGGRGVDAVKILAQYSTEGRVAKEQNIIFALALCARTGDADTKRAAYGMVNAICRTPTALFQFVGACESLAPICAGGSGWGRSQRRAVSQWYANRNPRTLAYAVTKYRSRNGWSHRDLLRLAHVKPPTDAHSVIFKYITKGIEEAGKLAGELAVSIAAAEANGSAVCDAGEDAMDVVMGADMSVEADMLGIAGVIEFLGIVERVNKETSESEAVRLILQHNLAREHLATGLLGSVAVWRAMLPAMPMTALVRNLGKMTSIGLFDGASELTIATKKLTDEFAIRAARLHPIAVLIALRQYEKGCGDKGSLSWTPKKAILDALDRTFTLSFHNLSASGKRFLLALDVSGSMSCGSIAGSGLSPRDGSAAMAMATLRAEGDDNCQTVCFADTLKPLNLKGSMQLNDVIRAISSLPFGSTDCALPMMWAAEKNKQFDCFVVYTDNETFFGSVHPAQAVKQYRERMGIPDARLIVVGMVANKFTIADPEDPGMLDVVGFDAGAPEIMRAFACGEL* # ORIGINAL: g10032.t1 original gene structure, not modified by PASA NODE_366_length_25863_cov_40.5697 AUGUSTUS gene 4647 5894 . - . ID=g10032;Name=g10032.t1 NODE_366_length_25863_cov_40.5697 AUGUSTUS mRNA 4647 5894 . - . ID=g10032.t1;Parent=g10032;Name=g10032.t1 NODE_366_length_25863_cov_40.5697 AUGUSTUS exon 5615 5894 . - . ID=g10032.t1.exon1;Parent=g10032.t1 NODE_366_length_25863_cov_40.5697 AUGUSTUS CDS 5615 5894 . - 0 ID=cds.g10032.t1;Parent=g10032.t1 NODE_366_length_25863_cov_40.5697 AUGUSTUS exon 4647 5488 . - . ID=g10032.t1.exon2;Parent=g10032.t1 NODE_366_length_25863_cov_40.5697 AUGUSTUS CDS 4647 5488 . - 2 ID=cds.g10032.t1;Parent=g10032.t1 #PROT g10032.t1 g10032 MGKLRVGVLGCTGTVGQRFIQLLEGHAWFELHAIGASDRSAGVPYATAARHWKLPTPIPPRTAAMIVQPCTPDAFEGVEIVFSGLDSSVAGEVEIAFAKAGVAVFSNSKNHRMDPLVPLVVPSVNDAHLAVVPLQQLRYGYTNNGFIVCNANCSTTGLAVALKAIDDAFGVDSCMVTTMQAVSGAGYPGVASLDILDNVIPYISGEEEKMEEEPLKILGTAVVTGADGGFHPSSIRMSAHCNRVAVIDGHTECASVKLRTRASADAVVQTLRAFRGSAVAACPSTPATPIQVFDGGACSDRPQPRLDREAGRGFTVSVGRVRTCPLFDVKFVLLSHNTVIGAAGGALLNAETAVAMGLVKRNGVPWTASTLAQ* # PASA_UPDATE: g10035.t1, single gene model update, valid-1, status:[pasa:asmbl_6387,status:12],[pasa:asmbl_6388,status:12],[pasa:asmbl_6392,status:12],[pasa:asmbl_6393,status:12], valid-1 NODE_366_length_25863_cov_40.5697 . gene 18729 25564 . - . ID=g10035;Name=g10035.t1 NODE_366_length_25863_cov_40.5697 . mRNA 18729 25564 . - . ID=g10035.t1;Parent=g10035;Name=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 25451 25564 . - . ID=g10035.t1.exon1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 25451 25564 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 25021 25147 . - . ID=g10035.t1.exon2;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 25021 25147 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 24625 24807 . - . ID=g10035.t1.exon3;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 24625 24807 . - 2 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 24022 24265 . - . ID=g10035.t1.exon4;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 24022 24265 . - 2 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 23436 23866 . - . ID=g10035.t1.exon5;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 23436 23866 . - 1 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 21644 23148 . - . ID=g10035.t1.exon6;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 21644 23148 . - 2 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 21108 21319 . - . ID=g10035.t1.exon7;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 21108 21319 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 20871 20920 . - . ID=g10035.t1.exon8;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 20871 20920 . - 1 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 20429 20658 . - . ID=g10035.t1.exon9;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 20429 20658 . - 2 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 19983 20219 . - . ID=g10035.t1.exon10;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 19983 20219 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 19696 19803 . - . ID=g10035.t1.exon11;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 19696 19803 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 19303 19446 . - . ID=g10035.t1.exon12;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 19303 19446 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . exon 18729 19176 . - . ID=g10035.t1.exon13;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . CDS 18811 19176 . - 0 ID=cds.g10035.t1;Parent=g10035.t1 NODE_366_length_25863_cov_40.5697 . three_prime_UTR 18729 18810 . - . ID=g10035.t1.utr3p1;Parent=g10035.t1 #PROT g10035.t1 g10035 MIALSRHVTLHRAPPYAVSTAVDVLVTNRYNRLPTMIEDIAPTAPVSETERDAALTRLNDVIAVRLASTSLPAPLDRPIIAKGILRLRVPDEYEVAMTLMGDGAVNGAVNGAVNGTAAAPAPWAIISVGILVGSGSGQGEEGARHLVSPQQLDFLRGLVQQRVRLVAAPESLAEVHAVLHSFCLSLRLSLMSTHALTLQSGLWAELARVEYTPGVHLTMHYWGPTPASAQAASNARDTSGGGRGSSGRSSAAQAQAQSAQPQSDANAPPDALRPKHSLRISLERIRGDTRLGVRMTPPVTNVATGENVVLEIPASAGGAVVEGLLMRAIHWQAQDKIQRLRDALVAGDAHGAIAGDDVRITHGLATVSDNASAREGDSLPATSLAHLSVRIHGRCWLSITTDIRSGRLVLSVADADATRGQVAARLGGAPDVSASAHGAGTNRNDAAVDAAVTEAEEKLNRSNCGSVGAFKQIDGVVTTLRRHLLLKRCEAVGALLGLDVAPAPPSAPAAGGGGGHTRASHVADGLRFRLPHYPHHVLAVDLAAPDAWQAYSVIDTSEPAGDDAAMLRRTVHLKIASASINVEDSGENPAKRQRIEMSANGDGDGLQQGGGNRPTAASLLSSALSFALVHVPLSIVARELSDVFGNCVSWETTEACVGGELCLPRLELHRLTPPSSPANQWLGPAHGHVTVVAGGSARWHVRVGLVRRPPSAFYGEFLGASVATAAAASHRSDRPANAVLVRASMDAPARALVLVYEGFGRAGDRLAADWRRVNLLARLAADVEALATENAFGDVSVRVSRVSFFSLRIVYYRPGWASQAVTFDVDEDATGGRVAVGCAEGLQSPHTPIAPFVEREFLRRLDIRDMMRLLILSWQPLHFVAGLVGARWTNAASSALGKTEPGVRAANAQSADTDGALSFTDFVVLPRSSTSVILCFRSTFWLQLNFLTPELAALSDANSRPGRKSVPDAIFRALAENIDGCTVHVSSGSADRKGCVVTCRRLLECVDRLRHMLGVAYLWERVCVHRRPQSAEKRPSVDFDGASVRIGCDGADVRLFVTDSFELDLEMTVRSDWGGGSANAGFSLDFQSEGVESGGFDEDSPAVLRDFLRTRVAGAPYHSSRVDAFLNMLSLPNTLLADFVRLIKLEKQPPSDGVRLLRMRLLLSIPHPLSVASSAPLVRHGAPAIHIAENKVFFMVRLSDPDSARADHIDVPLYHYIVLNSTRLWEDDTDARRNLPAMVSAQDMDWVGDLGDAGRTAPTPVGQHLLRVMRLPEARAHRPNACYAVRQLMGASLRDLTCAAPAPAVHSNYQQDAMLA* # PASA_UPDATE: g10033.t1, single gene model update, valid-1, status:[pasa:asmbl_6384,status:12], valid-1 NODE_366_length_25863_cov_40.5697 . gene 6808 12463 . + . ID=g10033;Name=g10033.t1 NODE_366_length_25863_cov_40.5697 . mRNA 6808 12463 . + . ID=g10033.t1;Parent=g10033;Name=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 6808 6922 . + . ID=g10033.t1.exon1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 6808 6922 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 7050 7298 . + . ID=g10033.t1.exon2;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 7050 7298 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 7556 7576 . + . ID=g10033.t1.exon3;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 7556 7576 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 7775 7847 . + . ID=g10033.t1.exon4;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 7775 7847 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 8024 8637 . + . ID=g10033.t1.exon5;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 8024 8637 . + 1 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 8787 8918 . + . ID=g10033.t1.exon6;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 8787 8918 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 9072 9241 . + . ID=g10033.t1.exon7;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 9072 9241 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 9562 9944 . + . ID=g10033.t1.exon8;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 9562 9944 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 10122 10128 . + . ID=g10033.t1.exon9;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 10122 10128 . + 1 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 10285 10330 . + . ID=g10033.t1.exon10;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 10285 10330 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 10546 10703 . + . ID=g10033.t1.exon11;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 10546 10703 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 10891 10947 . + . ID=g10033.t1.exon12;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 10891 10947 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 11058 11193 . + . ID=g10033.t1.exon13;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 11058 11193 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 11457 11629 . + . ID=g10033.t1.exon14;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 11457 11629 . + 2 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . exon 11954 12463 . + . ID=g10033.t1.exon15;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . CDS 11954 12217 . + 0 ID=cds.g10033.t1;Parent=g10033.t1 NODE_366_length_25863_cov_40.5697 . three_prime_UTR 12218 12463 . + . ID=g10033.t1.utr3p1;Parent=g10033.t1 #PROT g10033.t1 g10033 MRHPIIPSVCRILLLAFCITASMNRAHAAFRCFPANETVPMKAQAPIVFAVGDWDSSRINGWMAKLLLEERLGIPVQLEEYQDANKVFDDLASGKVHVYLELWLHVDLYKKYVLDDQSVSDVGALGVFGQIGWYVTDYVIAANEDLDNWRALRYQQNIALLHDDGLTANNSTKPTVQSLAQNVTATLQSSECTGDAASGCPSCRARVQANTAFLSNTSNTDNDPATFWGVPSSWDQHDADIIRNLKLNLQHHILWGNATGGGVEADLIDVATRRYRSRLPLIMYFWSPHQIHHAQSGIALTRMQLPSYSLDCQARAATGQYNCDYEIQVLLKLAWPRLEALNPQAMTLAKRFSLRTKDHNEVLANVAYNNMSLAQSACAWLKANPTRWDAWVTSSGVATTSSSSVPLNIILPVVLCGVFVIAVGLIVWTRHSRVLIYKQANQWIIDFKELRIQKVIGEWRGSVVAVKTIYSTEISLSGSMSSQHGSMSDDVDRISTPAGATAAPALRGANGTAYRTVQGRLSKKGAIDRGQDMRTTSVKSGILSSPEGRRSSRLSRLFLGTSVFDRSLARKNLLAAKEFRAEIATMCKLRHPNIVMFMGACVEEPRLAIVTEYMPKGTLLDLFDNKDVVFDWKLRLSVITDAARGMEYLHSATPPILHLDLKSPNALVDEHNRVKIADFGMATLKESAKNNVEIVGTPQWMAPEMTTEGEVSEKCDVFSFGIIMWEVLARHLPYSKEMMTMTSEQIADAVAKEGLRPWPIPSGCPAYVDLMTACWQQEPSNRPPFSTITERLSSLSPDTLLGPDFVHPDARHTPKAQMEVAAVDAISSGIDPAIVAAFQNLLTKTDDAYPPTHADADISPEFEVL* # PASA_UPDATE: g10034.t1, single gene model update, valid-1, status:[pasa:asmbl_6389,status:12],[pasa:asmbl_6390,status:12],[pasa:asmbl_6391,status:12], valid-1 NODE_366_length_25863_cov_40.5697 . gene 13335 18017 . - . ID=g10034;Name=g10034.t1 NODE_366_length_25863_cov_40.5697 . mRNA 13335 18017 . - . ID=g10034.t1;Parent=g10034;Name=g10034.t1 NODE_366_length_25863_cov_40.5697 . exon 17982 18017 . - . ID=g10034.t1.exon1;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . CDS 17982 18017 . - 0 ID=cds.g10034.t1;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . exon 17793 17903 . - . ID=g10034.t1.exon2;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . CDS 17793 17903 . - 0 ID=cds.g10034.t1;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . exon 13335 17609 . - . ID=g10034.t1.exon3;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . CDS 13728 17609 . - 0 ID=cds.g10034.t1;Parent=g10034.t1 NODE_366_length_25863_cov_40.5697 . three_prime_UTR 13335 13727 . - . ID=g10034.t1.utr3p1;Parent=g10034.t1 #PROT g10034.t1 g10034 MSESGIKRDAEEVLANASSIATDPTFRTMGDLHEITKRSANYTIQAGDKNGDTDWEADRSSSTQNSAIHGASGSESDLTCAASPLFPPTDVSLAVREVHMADAYCAGDGPHHQVIPACTESTMRTLMSSSRLSDSDAYFAVDAATDSVAPVASMFCESTEDQSAACGDPFASLDSNGGSSNDDESERAPEENSGADSVSAAKPVLCAYTPHPNRSIAKNSMALHAGARARKSAASWKRKERVALWKKRGPGPPPPWKCKRAANALSDEQPPGVAATIAATGAVTCADEAPRDAKQSLPIAPNRASLVSAAAAEAARIALSRLNARRADAGSDAETTHAHAPTHTQAQAQAQAQAQAPTVPSRSSPRARPAPTARPRHSQQPRQPSTQRSAALCRDTPALTKGRTPATFNLEFECSRSPMPQRAQAVSRLPQSPARDSQLRAVHDDFRGHPGYSSRCVDSPALSDERTNSSSMREDAIVRRHVSGEACGEPRHYGDSPLDDARDMYLQQKRRADHDDGWAGSDHKRQHRDTDFRQHEHISFQDRRWDDEPHRVFAAEEEAVARRYCGGNGDGRGPFSRERNETGVDRWPVRHPHDERRERERDVGFDDHVSPREGRLFYSDERMDNHSREVAGRTHHHRDDGTHERRAPQHANRVTEAPSFSYQGRVRSPSPSESFGMRADLVLESEPRDVRYRGIRGDDDIGRGEYMRDVRFKDDGAHGGHFDDRSGDGMRTHVHGHVHRASVWRDVTAHPTRCIEYIEDGRNELREEMRFDAHSPPPTRARLVSPLSSVCARRPCACAACEPPHPVRLAEERVDHRDDTYVGSIPRHHPDSAHFGGPQIDGKGYRDAHSTDSSFCKHRAEHDDGWAESDYKRQRRDADFRQHEHISFQNHRWDDEPHRVFAEEEAVARRYCGGNGDGRGPFSRERNETGVDRWPLRHPDDERLDGDVRFDDHVSPREGRLFYSEERMDNHFRARTHHHRDDATHERRGPQHANHMTEAPMSRSFEGYVPASPRLRRHSGSRPQDETTTQPPPPPVQRMTAGGEPRAVCDGGHLRTNSNGARDLQRLQGPRGGTDRQLVIPTPHNAESAGRHRPFARHTRGPVHRMGSLPVGGASGFAPALVRSQHTDAPAQNLHNTWAAWRPSTDASVQHGAPRGGGDLSASWPRAVPQTYHHGMRGAAAAQRMRTVSASSACGGRMLISQEEIVLRDLRDHHYEGLESVDRSGGAAIAIPEQAHDSARTPAGQTQPRSPDSREREQERELSQDAHRATGRASPAASLDPANDRDDTLASVHVGPTAENLQALVAPESSAPETAAGAVTEDDADCDADDVSFTFSWEDGGR* # PASA_UPDATE: g10031.t1, single gene model update, valid-1, status:[pasa:asmbl_6385,status:3], valid-1 NODE_366_length_25863_cov_40.5697 . gene 2249 4280 . - . ID=g10031;Name=g10031.t1 NODE_366_length_25863_cov_40.5697 . mRNA 2249 4280 . - . ID=g10031.t1;Parent=g10031;Name=g10031.t1 NODE_366_length_25863_cov_40.5697 . five_prime_UTR 4181 4280 . - . ID=g10031.t1.utr5p1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 4063 4280 . - . ID=g10031.t1.exon1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 4063 4180 . - 0 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 3447 3851 . - . ID=g10031.t1.exon2;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 3447 3851 . - 2 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 3126 3232 . - . ID=g10031.t1.exon3;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 3126 3232 . - 2 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 2896 2989 . - . ID=g10031.t1.exon4;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 2896 2989 . - 0 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 2623 2760 . - . ID=g10031.t1.exon5;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 2623 2760 . - 2 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . exon 2249 2527 . - . ID=g10031.t1.exon6;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . CDS 2391 2527 . - 2 ID=cds.g10031.t1;Parent=g10031.t1 NODE_366_length_25863_cov_40.5697 . three_prime_UTR 2249 2390 . - . ID=g10031.t1.utr3p1;Parent=g10031.t1 #PROT g10031.t1 g10031 MSRMVRIPLGLALIFTAAAIQAASARPANNAEVNYRPIIGIMTQPVQEEAQLSSSNATTASYVSASYVKFLESAGARVSIFHYDDDIATLKARLANINGFLFPGGGASLAATSPFFLAEKAVYDEAIAANDAGDYFPLWGTCLGFEFLSIATSGKHLLVDVNIANTSLPLNFTDVAADSRLFATADPAIMTSLASEAIAYNNHVYALSVESFKADTALSEFYDILSTNVAPNGIEFVSTMESKKYPIYGVQWHPEKPQFEWSPVKNFDHSLAAIDAVEHLADFFVNEARKSHRRFPTIKEETEALVYTDAAHLKYTLDDAALNDYVQCYVFE* # PASA_UPDATE: g10030.t1, single gene model update, valid-1, status:[pasa:asmbl_6383,status:3], valid-1 NODE_366_length_25863_cov_40.5697 . gene 145 2248 . + . ID=g10030;Name=g10030.t1 NODE_366_length_25863_cov_40.5697 . mRNA 145 2248 . + . ID=g10030.t1;Parent=g10030;Name=g10030.t1 NODE_366_length_25863_cov_40.5697 . five_prime_UTR 145 247 . + . ID=g10030.t1.utr5p1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 145 331 . + . ID=g10030.t1.exon1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 248 331 . + 0 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 495 649 . + . ID=g10030.t1.exon2;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 495 649 . + 0 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 773 942 . + . ID=g10030.t1.exon3;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 773 942 . + 1 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 1182 1360 . + . ID=g10030.t1.exon4;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 1182 1360 . + 2 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 1613 1777 . + . ID=g10030.t1.exon5;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 1613 1777 . + 0 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . exon 2080 2248 . + . ID=g10030.t1.exon6;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . CDS 2080 2118 . + 0 ID=cds.g10030.t1;Parent=g10030.t1 NODE_366_length_25863_cov_40.5697 . three_prime_UTR 2119 2248 . + . ID=g10030.t1.utr3p1;Parent=g10030.t1 #PROT g10030.t1 g10030 MMSPHGSLVKYDNPVLVSHVSDKKTPGKTQPAMAQNGATLNKSQKAATAPSPTRPGKLPPVANDKLQQTEDILNSILPPREWVENGQLWVQHVSSTPATRLDVINLQEQLDQRLQQRQARETGICPVRRELYSQCFDEIIREVTINCAERGLLLLRVRDEIRMTIAAYQTLYESSVAFGMRKALQAEQGKADMEKKILDLENDKKELERQVLELKAKCDAIEKREAERRAVEERKHVEEVAFLKRTNQQLKTQLEGILAPSKK* # ORIGINAL: g1979.t1 original gene structure, not modified by PASA NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS gene 5645 6542 . - . ID=g1979;Name=g1979.t1 NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS mRNA 5645 6542 . - . ID=g1979.t1;Parent=g1979;Name=g1979.t1 NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS exon 6053 6542 . - . ID=g1979.t1.exon1;Parent=g1979.t1 NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS CDS 6053 6542 . - 0 ID=cds.g1979.t1;Parent=g1979.t1 NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS exon 5645 5730 . - . ID=g1979.t1.exon2;Parent=g1979.t1 NODE_2247_length_7093_cov_29.4232_potentialcontaminant AUGUSTUS CDS 5645 5730 . - 2 ID=cds.g1979.t1;Parent=g1979.t1 #PROT g1979.t1 g1979 MSDVVVVGFNSLAPETVVHHIVPYLSNVDVSSLAKVNRALHAHLRQKRLYHLWPLYNRKYIEDATFREELKATIPVGRLVLDGCNRGEAHRELAPFAGVYSVTLDDRGSLPDLTPVHGVKQLVLLRSVTIDVAPFSNLQRFSMMNSAVRNLDALSMVRDIELRVQYKTCQQFGMFILSYCAVRTGCTTVQM* # ORIGINAL: g9999.t1 original gene structure, not modified by PASA NODE_603_length_20352_cov_42.0186 AUGUSTUS gene 6353 15057 . + . ID=g9999;Name=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS mRNA 6353 15057 . + . ID=g9999.t1;Parent=g9999;Name=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 6353 13276 . + . ID=g9999.t1.exon1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 6353 13276 . + 0 ID=cds.g9999.t1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 13557 13601 . + . ID=g9999.t1.exon2;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 13557 13601 . + 0 ID=cds.g9999.t1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 13939 14034 . + . ID=g9999.t1.exon3;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 13939 14034 . + 0 ID=cds.g9999.t1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 14230 14300 . + . ID=g9999.t1.exon4;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 14230 14300 . + 0 ID=cds.g9999.t1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 14511 14679 . + . ID=g9999.t1.exon5;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 14511 14679 . + 1 ID=cds.g9999.t1;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 14932 15057 . + . ID=g9999.t1.exon6;Parent=g9999.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 14932 15057 . + 0 ID=cds.g9999.t1;Parent=g9999.t1 #PROT g9999.t1 g9999 MRDALRKQTSVRSRARWAVASSTLRASRGHGAARAFMNLNFAASVIFLLHVIPVALASPFSSTFEGINGAVSSGETDILVSLADGTEIDALSSPQIVIPNGVSVSVRPFDSFSTVTVTCVNTVPSPFALTQSASADDHEALFLVESGGNLTISSATFQGCASVFARVNTGGHLHIAHGAFSDTACEGRLSVSGTATIESTLFLCGNSTESDQVFTNEQWGKIPAAVIVRDGGSVDVTRSSVDGRPAIFATDDASVHVHFSTLSSSLVVASGNASVVVEDTFVGCGVRTSLRVLGYASVTISGGEIRQLQSALASSGSDSSGNATVPVASTTCHVVYATDDSRVALHDMSMSLIDCAAVHAGARSFFGTVDVALSTVESSPLFSFAGGVQVDVTGGSVTTNNVDALMCFAGEQSLVRFTRTSLSGRYFMSASDSAMLSMDDVFLTANLYVDDDRHAVDVSGNASVRVWNSSFAGTYTFPAFPPASHRHVFGVTGQAQLTISDSRFVDFPGLVHAAGISVTRMTRVTVRGRTLPPYIFDEFFWRPADVDKGGVFVLEESASLTASLCNFDSVPRAFTGGIGFMTGNSRAVVESLAVNVSGSDGAVGGGFALEGSATLDVRASSFENIFTLSTFDNKNSRSRGGVFALMESSSLTVDDATFSHCRSEYGGILYATGMATASISNLRVYNAIGKSVGGVVMAEGSATVSLTDTVCTEIFTGDEGGIVFASMGANVIARGLVVSNVTAYRGALVSASDSSNVALSQSVVADVNCKEYVITNRSTSAIYLFPERDMPELQDIRIAGGVIFVSGTAAVTVMSLHASSIVMGGRGGLAASFDTSSLSLSDITITKSEVKLAGGVFYATDSSRLEVARAKVSLVRSGGRGGVAAATFLSKMTLLRLEVSDVAAYDGGCFSVEYAAQLFVGDESRCNCSASHRGGALIADGWGSTATIDRSWFGISSAGTIGGFVHVTEAAIVRLYGVRVDASNAEQEGGCVATSGMAACYLNRSVFARCTAGLDGGALWATAQSQIAAAMSTFMEVTTLSGTGGGVRAMGNANVVLEGCVIDSATASSHGGLVSAVESSTVTVGNTSVNVSVTTGGCGGFAFTSDQASLTVTESHAQSSLATVGSGGALCAVSRSTATILSSTFGTTRSAASGGFLVQSGVSHVSVSDVIIDNAESSVGAAMCLRGASTVALGNVTIFRAALVIFPGMPSPPAVHDGWLSAFDESVAYYGEGVACVDCVEEALSPSVFEEAVRTILPSFSITEWFDFIHPPPFQQVLADMQSGSIVSSRSQSHGVGFDISLTTPFGVNSITYERGKLRIFTVAVVGNAQFLSVPELFVGANATVVFIGTYFALDTVLIVEGYAEFVGCFFMFGFQLIVRSNAMVKVRDALFVQSLGFGSSPTTPPFLVMSGSAFVSIVRASAEVKKSEVTGCFAVLSQSSSLLVVDSTFSTLQTTTNGAFVSSNDEESDDVSHHAVSLVRVTFGSVSANGYGACLYLKGEAAAYLTGCIVGLSQAILSGGVAHVTGRVKIVFMDTHIFSASASSGGVLSIIGASSVTMTNVIVEDSSSSGSGGVISAGPESTSASVPSIDMDGVHVMKSFAGTSGGVVFLYGVRLHARGLHIENAMAAKSGGFAHVSGERPSDVTLSECVFTDLNGGVQGGILDIGDNVQLRLENSVAERVFVSIFGGAIAVLGGNVVITGCSFRTIAASSGDGGVVYAHAGMLLIEKSNFTNVNAALRGGFLFAQAVSNVIIDNVIVDGASSGYMGGGAVYGTGKALLTLRSISMRNTKSGGPGGAIAVDGFVVADIAQLDITATAVDFASGGAICVLGRAVLSITGSTIRETSASQSGGAISVHGESSMMALMVTITSSVSTKGDGGAIAVMDRAYVILSSVWIEHTEAPVGDGGAIFVDEMATLATSVLDVRMSAASRGGMLYVADGGFANLTFTVVSNSTALANGGCVYSASAHIALDSGSFDGCRAAGDVSSYGVGGFLCLANADASYATVANTFVGGAWAASAPVVYSASQLNRTLVSVVAVGFESLSPDGNSSYSTPPAHLSVDFVASGNDNGEGNGTKAGYNVASGIAATNGTLAPAQTQLSGSILPRFSVTILDSYGNRAFASPSVPVSIRLEVASPHTSNCTLSGDLARTFERSIVDYTAVRVSATSVPMTCRIKFVPGNLLYAATHPLFHVAAFDVELAPCPSGTTLTEEGAADGSKSGGTGVHSCVVNAAQSSTDASKGATTAIAIVVPVVVIMCVVVCIVAYVLVRKSRAKWNQKQLEDFAKHVMSATPDLARFELPRECIELQEVLGEGAFGVVHRAQVLIGEKIRMCAVKTLKPNVPVDQRIEFISEAEIMMHLECPNVVHLVGVSTACDPMYIVLEYCPHGSLKSFLAKVERQRTNKTSGVFDFVFVGFARDIADGMHYLSSRNIVHKDLAARNVMVAQDAFGEYILKASYHWLVSSVTSHSVAILISF* # ORIGINAL: g9998.t1 original gene structure, not modified by PASA NODE_603_length_20352_cov_42.0186 AUGUSTUS gene 74 4182 . - . ID=g9998;Name=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS mRNA 74 4182 . - . ID=g9998.t1;Parent=g9998;Name=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 2974 4182 . - . ID=g9998.t1.exon1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 2974 4182 . - 0 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 2244 2449 . - . ID=g9998.t1.exon2;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 2244 2449 . - 0 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 1872 2022 . - . ID=g9998.t1.exon3;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 1872 2022 . - 1 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 1249 1513 . - . ID=g9998.t1.exon4;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 1249 1513 . - 0 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 796 891 . - . ID=g9998.t1.exon5;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 796 891 . - 2 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 414 490 . - . ID=g9998.t1.exon6;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 414 490 . - 2 ID=cds.g9998.t1;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS exon 74 184 . - . ID=g9998.t1.exon7;Parent=g9998.t1 NODE_603_length_20352_cov_42.0186 AUGUSTUS CDS 74 184 . - 0 ID=cds.g9998.t1;Parent=g9998.t1 #PROT g9998.t1 g9998 MLSVASPTAGGRRCPHIHGDVNALRQRFCLALHQGDAGSGGGDRTAKKSSGKGKSSLKSKKPADVSCAKCAVSHPNVWACVEPSCGFRGCGRYQNGHFLAHHNESRPGGTLDLKRKNSIKERSPSVAFHSVCVNTATGVVWCYECDCEVEDENDGSPPEPVPVLSGRHLRTASVGSARSTTASGDGTKAAGGDSGNANGEDADDNASVASSSVSSMSPRDNRRGVCGLANLGNTCYMNAALQALSNCHPLTQYFLDCQQLLRHVAPGNALVDSYSSLLSTIWGGKFETAVPTAVVREVRTLSPVFRGYGQQDSQEFLRFVLDKIGEGLKQTAIRPELFAANREGCPNGPNDEKGEKGEKGEGKGNATSPQTQRGDDKGTYHSIISDVFEGVLRSEVTCFNCGKTSIKDDAFLDLSVPIPSRKRKSSQSGGDSGSTDALARDHTSGGRQAGDATAKKQKGNSGLFGYFGNWLGFGSGKAVTLEQCIGAFTATEELTGDDRYRCEHCKTHTDSSKRFRILSLPEILCVHIKRFRYDSYFSSKISHKVAFPLRNFDMAPFVMPHADANAHAHAHSHTSNGHSGKHSDRRASADNNARDPDASSSESGCTAEGKGNSFYSFPRPKAMQRGTNYDLVAIINHRGGIGGGHYVCYAKNCVDNKWHEFDDGHVTEVDESYVAEVEAYVLFYQRKPTESSHKEKKRIWRLIDE # PASA_UPDATE: g10001.t1, single gene model update, valid-1, status:[pasa:asmbl_8443,status:3], valid-1 NODE_603_length_20352_cov_42.0186 . gene 18597 19956 . - . ID=g10001;Name=g10001.t1 NODE_603_length_20352_cov_42.0186 . mRNA 18597 19956 . - . ID=g10001.t1;Parent=g10001;Name=g10001.t1 NODE_603_length_20352_cov_42.0186 . five_prime_UTR 19829 19956 . - . ID=g10001.t1.utr5p1;Parent=g10001.t1 NODE_603_length_20352_cov_42.0186 . exon 19634 19956 . - . ID=g10001.t1.exon1;Parent=g10001.t1 NODE_603_length_20352_cov_42.0186 . CDS 19634 19828 . - 0 ID=cds.g10001.t1;Parent=g10001.t1 NODE_603_length_20352_cov_42.0186 . exon 18597 19350 . - . ID=g10001.t1.exon2;Parent=g10001.t1 NODE_603_length_20352_cov_42.0186 . CDS 18649 19350 . - 0 ID=cds.g10001.t1;Parent=g10001.t1 NODE_603_length_20352_cov_42.0186 . three_prime_UTR 18597 18648 . - . ID=g10001.t1.utr3p1;Parent=g10001.t1 #PROT g10001.t1 g10001 MQEDGCSLIHPTERLTNCDRATNSNRAEGFLRTYVKDGNNGVPVFVSESVPPRGYEVHDTWASYLRWREYPMFAAGFLCHALDALSQPATILRALANTIGADALRQKETLVVHVVGAAMPEVNMCLVYEEILHVLPALNSLRIVLIGPDLPEFGHIDEESLTCCPACTSAGRTRKLSVCHELYHELVPKLQEAADGRERPDVIVAFNSGIHEAETDLWAPTLDLLARTAGVCVFTSYTRGECDLDEAVLRDKGMEIVQPAALNPFAGARELLDPMEVDVYYRQNNYVLIARGKGGDTA* # PASA_UPDATE: g10000.t1, single gene model update, valid-1, status:[pasa:asmbl_8441,status:12], valid-1 NODE_603_length_20352_cov_42.0186 . gene 16117 18032 . + . ID=g10000;Name=g10000.t1 NODE_603_length_20352_cov_42.0186 . mRNA 16117 18032 . + . ID=g10000.t1;Parent=g10000;Name=g10000.t1 NODE_603_length_20352_cov_42.0186 . exon 16117 16134 . + . ID=g10000.t1.exon1;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . CDS 16117 16134 . + 0 ID=cds.g10000.t1;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . exon 16538 16675 . + . ID=g10000.t1.exon2;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . CDS 16538 16675 . + 0 ID=cds.g10000.t1;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . exon 16920 18032 . + . ID=g10000.t1.exon3;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . CDS 16920 17807 . + 0 ID=cds.g10000.t1;Parent=g10000.t1 NODE_603_length_20352_cov_42.0186 . three_prime_UTR 17808 18032 . + . ID=g10000.t1.utr3p1;Parent=g10000.t1 #PROT g10000.t1 g10000 MWSFGQIPFPNLSNSEVLRFLTKGGRPEAPDNTPATVYATMLSCWEFVPDDRPSFASLVDIFAKIHTSWSAKMGQNSELRPRDIDVSINFPRRPSDVPVIRTPHADYAMDPPSTQHGRPSVVSQGTGSAYMDFTPNVEEPDDVGDLPLSSGSPRDRDRQRKYSTASNRIRSRTASSSSSRSRTSSQASSIRPQSSIGAQAFLSPFDAGAGVGGVQNAYSEEPPSVEQEEVKEDVSIAYDNALPATIDRGGDYSLPPSFASLNSNSNNHNGSNSNLITSPDEQDNARHGATLTVPRRSRGPSLSSAFAAVRSFAVSLRGPTPAARISGTIELVENARHMDPLVDDSEV* # ORIGINAL: g9448.t1 original gene structure, not modified by PASA NODE_2280_length_6936_cov_42.3673 AUGUSTUS gene 174 4930 . - . ID=g9448;Name=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS mRNA 174 4930 . - . ID=g9448.t1;Parent=g9448;Name=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 4789 4930 . - . ID=g9448.t1.exon1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 4789 4930 . - 0 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 4236 4345 . - . ID=g9448.t1.exon2;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 4236 4345 . - 2 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 3833 3932 . - . ID=g9448.t1.exon3;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 3833 3932 . - 0 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 3341 3536 . - . ID=g9448.t1.exon4;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 3341 3536 . - 2 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 2940 3087 . - . ID=g9448.t1.exon5;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 2940 3087 . - 1 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 2612 2758 . - . ID=g9448.t1.exon6;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 2612 2758 . - 0 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 2171 2294 . - . ID=g9448.t1.exon7;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 2171 2294 . - 0 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 1676 1808 . - . ID=g9448.t1.exon8;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 1676 1808 . - 2 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 1248 1399 . - . ID=g9448.t1.exon9;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 1248 1399 . - 1 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 870 990 . - . ID=g9448.t1.exon10;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 870 990 . - 2 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 572 683 . - . ID=g9448.t1.exon11;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 572 683 . - 1 ID=cds.g9448.t1;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS exon 174 254 . - . ID=g9448.t1.exon12;Parent=g9448.t1 NODE_2280_length_6936_cov_42.3673 AUGUSTUS CDS 174 254 . - 0 ID=cds.g9448.t1;Parent=g9448.t1 #PROT g9448.t1 g9448 MASTGRTVVKVSSDVIARVSLFSKEGQELLKHAEHIANIYSNEGSNHDASAVDTNTGRSPSFPSEGAGLLCSTCHVSFADAMLQREHFRTDWHRYNIRGKIRGSSPITEADFEHILENSGVSSISGSEASDSDAGQHESRGAVEDESVQEQCLDNNRTPRVFFLDGRTSEPAETQGRVLSVYRSLFPIPNSVGDDPLETLNELRRSVAPLSKVAVFLCGGGHFAGALFTGVQLSTHKTFHRYTVRRKQGGAQSQRDAQSGGHRIKSAGASLRRYNERALEEEIRELLVTWSAELEACTLIFMQMPLYHRTIFFGGKSPAFEKGDKRIRTVPFITRRPTLKEAERIHGELATIQIHPPPEVVVETIVSAATETGSVGITRSAPAVEAVSVPSGPPLTPLHTACETGTLAEVESLMESHSGDLSALAGDWLETPLHIASRMGRNEVVSILLSRGADPTVRDARLRPPYVGASDKETRNAFRRFMGEHPDAWDYVDAQVPSALTKDMEEKRDKEKEEKDKERQEK # PASA_UPDATE: g10532.t1, single gene model update, valid-1, status:[pasa:asmbl_5601,status:12], valid-1 NODE_312_length_27269_cov_43.1156 . gene 2617 6857 . + . ID=g10532;Name=g10532.t1 NODE_312_length_27269_cov_43.1156 . mRNA 2617 6857 . + . ID=g10532.t1;Parent=g10532;Name=g10532.t1 NODE_312_length_27269_cov_43.1156 . exon 2617 3050 . + . ID=g10532.t1.exon1;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . CDS 2617 3050 . + 0 ID=cds.g10532.t1;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . exon 3136 3676 . + . ID=g10532.t1.exon2;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . CDS 3136 3676 . + 1 ID=cds.g10532.t1;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . exon 3829 4049 . + . ID=g10532.t1.exon3;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . CDS 3829 4049 . + 0 ID=cds.g10532.t1;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . exon 4236 6857 . + . ID=g10532.t1.exon4;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . CDS 4236 6420 . + 1 ID=cds.g10532.t1;Parent=g10532.t1 NODE_312_length_27269_cov_43.1156 . three_prime_UTR 6421 6857 . + . ID=g10532.t1.utr3p1;Parent=g10532.t1 #PROT g10532.t1 g10532 MGIMAVMNARAEDAREAGPLLEVDGTTMQFSDPTVEQMYCQQSMKRALLGVIGGALIPPLAVSGALLSSSGVAGAVLGIGLVAAILSAGMASRHRTRDVGRFHSVIFGAYVALCATVELSAASAASSRAHLAAWMILAGLMLEASSTFVFAVAASHILVCGAFGEGATLCESAAFMNVALIVLVVARNADSLGRKRYAAERGARIVVGCGFSQLPALSVLGDIVNLVVAAPHAAPMDVAFVSDRATSLPVSTIEDNSAIEFAKRDELISALHYGGTDIISQIDEDGRFVYVSPNCECAFGYTPAELIGTRAAALLAMPAPVDAPEVSPYEAVSRIVPELRQMSSGTKELFHDRDVRKVRRDNRTVVMRVRCIVQYRVRDDGTEQVHFVMSERDVTPAIQDSVGDVWQPIPEKTGDRSGFASVQADGRSQPSAQPLSLARSVKPPAILRSRASPVAVSDNTDHVARPDMATPPISAIISDVFDVKMVSNNDCVCAANSMEVQRGSAELATIEASPRAIVAYVMGNMRASQASYICGRIQAQLGTLDATLILSDDMWIEIFKHLSVTDLKRVALVCRRFSALSCCDASWAWRCNIFGWTRPPVGSPHAALGFRGGFLKPYQSHMRWVEANPMPQVYMSDRAGVSAVCAGARYLVAACECSVGVWDAVTLGMLYGMASHADIVLSIDMRGNLLVSGSRDTTAIVWRLSHDRGTPVSRFIGHSGAITHTAFLSPNAFGGALGSRPDEAQDEDPRLLITGSADGTVRLWDVYTGACLTIFAAHEAPITKMRILADGRILTGGSNGFLRMSVLRPDDIAAVAAATPLSHFGAGATTMELVSVGCSVSVLACGGDLVFAGVDHDIMVYCSAGVCKPASRPTPAGKRELVKLSGHTDDVVCLLVRADGPLLISGSKDCTLIAWSLEDDADDRVASSGGRRTRGRIVQRMVGHEGAVNCLLQTRGNRRRYTLSFGASEDGLGSDAADNVCARCGTLFASPTINCDCTDADVPDLVISGSEDRTVRVWSPRKWECVFTLGNVVDDPRIQGITCLALRGNILAVGFGSTVLFDDDENDDFDATRTNEALILWDFRSMTLVRGDAMSPPLQRAATRIQSAGAHPSEAVHRVYAPRVAY* # PASA_UPDATE: g10539.t1, single gene model update, valid-1, status:[pasa:asmbl_5604,status:3], valid-1 NODE_312_length_27269_cov_43.1156 . gene 25234 27160 . - . ID=g10539;Name=g10539.t1 NODE_312_length_27269_cov_43.1156 . mRNA 25234 27160 . - . ID=g10539.t1;Parent=g10539;Name=g10539.t1 NODE_312_length_27269_cov_43.1156 . five_prime_UTR 27036 27160 . - . ID=g10539.t1.utr5p1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . exon 26900 27160 . - . ID=g10539.t1.exon1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . CDS 26900 27035 . - 0 ID=cds.g10539.t1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . exon 26619 26736 . - . ID=g10539.t1.exon2;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . CDS 26619 26736 . - 2 ID=cds.g10539.t1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . exon 26217 26374 . - . ID=g10539.t1.exon3;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . CDS 26217 26374 . - 1 ID=cds.g10539.t1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . exon 26009 26099 . - . ID=g10539.t1.exon4;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . CDS 26009 26099 . - 2 ID=cds.g10539.t1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . exon 25234 25824 . - . ID=g10539.t1.exon5;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . CDS 25278 25824 . - 1 ID=cds.g10539.t1;Parent=g10539.t1 NODE_312_length_27269_cov_43.1156 . three_prime_UTR 25234 25277 . - . ID=g10539.t1.utr3p1;Parent=g10539.t1 #PROT g10539.t1 g10539 MSCIGSEFNRINAMRCPYCTVAEPSQWTCAMARPHSTRPGSVPRTVTPAFGTKDIEAGICTQCGDDFRRGWRRSTVRLRCRHEFHFECAGTYFNSKGRMECPMCHRIDSTGVWAYMLAPDGRRVTSRNFPADNASNSDDENEAAPLVAQDPPREFFALYRRAWSNVWRGKVRSEYLAPRLLGLLCMLAVASMVVFAGTGRSSPFRVENVRPALGLTRDIVENIVGNVSAQGPAQQDGLGFVEPDGSRTQACCTFTTESIAAIVASVVSAFVVFLTLPALLLCFGPPLFIGVAVWRYYHELFIWSSYEMAIEGAAVGFCLIGWLLYLYVSGDGFGLLRRPRQSLRLVYGV* # ORIGINAL: g10533.t1 original gene structure, not modified by PASA NODE_312_length_27269_cov_43.1156 AUGUSTUS gene 7247 9220 . - . ID=g10533;Name=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS mRNA 7247 9220 . - . ID=g10533.t1;Parent=g10533;Name=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 8878 9220 . - . ID=g10533.t1.exon1;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 8878 9220 . - 0 ID=cds.g10533.t1;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 8126 8673 . - . ID=g10533.t1.exon2;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 8126 8673 . - 2 ID=cds.g10533.t1;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 7924 7951 . - . ID=g10533.t1.exon3;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 7924 7951 . - 0 ID=cds.g10533.t1;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 7647 7785 . - . ID=g10533.t1.exon4;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 7647 7785 . - 2 ID=cds.g10533.t1;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 7247 7475 . - . ID=g10533.t1.exon5;Parent=g10533.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 7247 7475 . - 1 ID=cds.g10533.t1;Parent=g10533.t1 #PROT g10533.t1 g10533 MDATTQVDAAAQAAQVDAVAQVDAAQVKVDGAAQADGAAQVDAAQVDAAAQVDAAQVDAAAQVKAADGALGDTCSDEIDSQAHNTSLSDRLILEHLLQWNRAENVELDSSQLIEECPNFRCAACGYGFRVDLSATPLEKVFGWTGTDTAPAVGYGDVANPSQPTSADQSNNDAQSEGGAVYAFSAAESALSLYPVSLDGSCPSCHSFGVQYVVCSVHDDVATALTHVNAQLRWLLRKRLAELLPGVAEDLFVSMPSFKCLGCGYGFNLDWSACSLEQIYGIAATDIATEISTGVDAELIQACQMAQEESHPAETKKNQRSASHNAENDYNVRAYFCKRTGRFRRVAGEGAPEEEPIVERWGILQHKLDTSLLTAPSSGLREGATPVGIMGSKTLAAPAPPLKRKDVQRMATERKAKKLKTKHAWLYSE* # PASA_UPDATE: g10537.t1, single gene model update, valid-1, status:[pasa:asmbl_5605,status:3], valid-1 NODE_312_length_27269_cov_43.1156 . gene 18120 23883 . + . ID=g10537;Name=g10537.t1 NODE_312_length_27269_cov_43.1156 . mRNA 18120 23883 . + . ID=g10537.t1;Parent=g10537;Name=g10537.t1 NODE_312_length_27269_cov_43.1156 . five_prime_UTR 18120 18202 . + . ID=g10537.t1.utr5p1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . exon 18120 18586 . + . ID=g10537.t1.exon1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . CDS 18203 18586 . + 0 ID=cds.g10537.t1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . exon 18942 18999 . + . ID=g10537.t1.exon2;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . CDS 18942 18999 . + 0 ID=cds.g10537.t1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . exon 19134 19190 . + . ID=g10537.t1.exon3;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . CDS 19134 19190 . + 2 ID=cds.g10537.t1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . exon 19438 20897 . + . ID=g10537.t1.exon4;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . CDS 19438 20897 . + 2 ID=cds.g10537.t1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . exon 21057 23883 . + . ID=g10537.t1.exon5;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . CDS 21057 21194 . + 0 ID=cds.g10537.t1;Parent=g10537.t1 NODE_312_length_27269_cov_43.1156 . three_prime_UTR 21195 23883 . + . ID=g10537.t1.utr3p1;Parent=g10537.t1 #PROT g10537.t1 g10537 MQLIMAMNLSASRRQSPLPLCGARMLMVVLAATIVAIPRAKGNLACVRGDFFEGCGNDEYVELLETGRRMFDVDATMQTVAMLYSGDVNAMVEGPTWNAWWTQNSYGATYTALPFMQEPLRTFVQNSQNFWFDHIGDGSTVDPQGNIGPDGCLCDDGGPTYCRYKQGDGIVWQHDFALEESLSAVVMQAELLLIDRDPAAIAHYLPLMRRTANLVESRRDANNDLYMCGDSCDLLAPSFGGYVHANGSRANAFFSGLSVSYAAALERLAELETLAGDPLWATEYRVRRERTVSALHERYVADSGDYLVKSIDPDGVVHGVLGASKHGYFQAVVNHDAVCFGAVNETLARAITQKMASMSELRPFNFTITNYPSLDDMEVDATSSWLWSFGTWVNGGAWGTCEARMIMAFARFGFHQIALNAMRTLMSFSRAWRMDSPLVNFGKSVYQPSQPINLVYDNFGIPGALIRSLFAPKYDAVGVTLTPSIPRDIVSLRQKFPVRLADKRLFLSSSGVCCDIASVSVNGKPWGNFTAAAVVLPYDQLPAGNIDVVIVFAKDPQNEPHPFRDMGRRNVDVADAHKRNAPSTLYSDVRSATLEASYPAVALFVTRMRDSGLGESYECAHADLFVRFVDVMRERRSLAHDGKLNILPDPASQAAADASYPDTAMKLLYGLNKVISGYRTSQDQTKSKIYSIWSAPTA* # PASA_UPDATE: g10534.t1, single gene model update, valid-1, status:[pasa:asmbl_5603,status:12], valid-1 NODE_312_length_27269_cov_43.1156 . gene 9797 11364 . - . ID=g10534;Name=g10534.t1 NODE_312_length_27269_cov_43.1156 . mRNA 9797 11364 . - . ID=g10534.t1;Parent=g10534;Name=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 11281 11364 . - . ID=g10534.t1.exon1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 11281 11364 . - 0 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 11045 11182 . - . ID=g10534.t1.exon2;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 11045 11182 . - 0 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 10777 10915 . - . ID=g10534.t1.exon3;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 10777 10915 . - 0 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 10525 10612 . - . ID=g10534.t1.exon4;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 10525 10612 . - 2 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 10176 10321 . - . ID=g10534.t1.exon5;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 10176 10321 . - 1 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . exon 9797 9992 . - . ID=g10534.t1.exon6;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . CDS 9856 9992 . - 2 ID=cds.g10534.t1;Parent=g10534.t1 NODE_312_length_27269_cov_43.1156 . three_prime_UTR 9797 9855 . - . ID=g10534.t1.utr3p1;Parent=g10534.t1 #PROT g10534.t1 g10534 MPVCVECGQIIDSLYRKFAGGTIKLTVCPNCKRDADPYVEYDNTLVAIDILLQRQQVYRHLLNNDLADTKKHFKRNAAKLGFIFLLCDVCLKILNPGTPNRFAPTEPAMQLLLVLLSSATELFLYVLGVFLSALFLAPSHSRKNACTTTGFVRVSIALLLASCGRLLVFPVMIWDYRGVPYVHIAGTFIALSSVQAIRVILDTPLSRALTMVLCGAACRYLFAHFVANMEASPVWWDYNALWI* # ORIGINAL: g10531.t1 original gene structure, not modified by PASA NODE_312_length_27269_cov_43.1156 AUGUSTUS gene 298 1489 . - . ID=g10531;Name=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS mRNA 298 1489 . - . ID=g10531.t1;Parent=g10531;Name=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 1368 1489 . - . ID=g10531.t1.exon1;Parent=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 1368 1489 . - 0 ID=cds.g10531.t1;Parent=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 597 1038 . - . ID=g10531.t1.exon2;Parent=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 597 1038 . - 1 ID=cds.g10531.t1;Parent=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 298 411 . - . ID=g10531.t1.exon3;Parent=g10531.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 298 411 . - 0 ID=cds.g10531.t1;Parent=g10531.t1 #PROT g10531.t1 g10531 MADSKYSTYTRNELQDMLEERGIIKGGIKSDLIARLVENDRDPTSSPRSRARKALDASTHIGSDNSRGRSTSRSRSPARRSTSRSRSPARRKGAVAADSTLAASAANDSDADSTSAVKRRRGTPTRAKGVASGAPVAENGAQHVEADARAANNGGAHAPHLESEDAIGIFRAPLKTLVYFGMEVSTYSAALAEWLGYHKKPTASALSSLLLMTAFYLARNDLLGKE # ORIGINAL: g10538.t1 original gene structure, not modified by PASA NODE_312_length_27269_cov_43.1156 AUGUSTUS gene 21541 23616 . - . ID=g10538;Name=g10538.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS mRNA 21541 23616 . - . ID=g10538.t1;Parent=g10538;Name=g10538.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 21541 23616 . - . ID=g10538.t1.exon1;Parent=g10538.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 21541 23616 . - 0 ID=cds.g10538.t1;Parent=g10538.t1 #PROT g10538.t1 g10538 MGTTSFADPLPFTPLWLDSWSPECAEEITCKMSIKREAGRFNTATDDESDSDSHQPDAMNNPPARLRGAAGALGLRMPVMPVSDRAHIGAGQQFMVPDLSMLSGNRSLDASFNSGFINPTLFGFEIESALNSSATTDDAEDVLLDRSIPAQQQPMSWSDETHTFGPGSVAHQIASSGPTRGQRAGVQGNEFLVANRSFSTTATHMQISGETRHKRRRGSSDSGASLPQPGSSGSAVAKGPRSKRARTSITSQNPNESQSDGHRAAAIRAAEPHNNAESVNQASAAVQWSANERYQRQQLQFDRQQHHQPQAGEQHAHHQRQQLPFVAMQMPPHMVFPDDTPAQLAIAGTGSGEQQQAYPVYFINYLTAEQVQVLGIDVATANAMGPISVVNYANAGELNAPAAVAMGTNNNLAQWSSQVVSPVTPLSTATQYPVLSNVAPNTVSSSATLAMKASTITRKPSIHASVADHAATAPTMARRGSHDAHALGDSQITPATADGYKQDPAPDRSQNAGNIRTASLNVKGIETPISAPSQQRRPSLPDTDHSEGSIASESTTAGSMAAAGQGTMAAKSKGASRITALNDGVVVRHVWRKESDGVFMTFYNQRGQKQCANCQSTRTPQWRRGPDGEMSLCNACGLRYFKWEKKNLRESSQESGQSVLSAVSQSETTVTVTPPPPPPTEGSEATGGHAE* # ORIGINAL: g10536.t1 original gene structure, not modified by PASA NODE_312_length_27269_cov_43.1156 AUGUSTUS gene 14681 17441 . - . ID=g10536;Name=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS mRNA 14681 17441 . - . ID=g10536.t1;Parent=g10536;Name=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 17342 17441 . - . ID=g10536.t1.exon1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 17342 17441 . - 0 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 17102 17224 . - . ID=g10536.t1.exon2;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 17102 17224 . - 2 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 16552 16959 . - . ID=g10536.t1.exon3;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 16552 16959 . - 2 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 16220 16303 . - . ID=g10536.t1.exon4;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 16220 16303 . - 2 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 15787 15908 . - . ID=g10536.t1.exon5;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 15787 15908 . - 2 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 15407 15465 . - . ID=g10536.t1.exon6;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 15407 15465 . - 0 ID=cds.g10536.t1;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 14681 14984 . - . ID=g10536.t1.exon7;Parent=g10536.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 14681 14984 . - 1 ID=cds.g10536.t1;Parent=g10536.t1 #PROT g10536.t1 g10536 MLVSLQFEDDMIDARDVAEEIDVEDNPEAALETALDDMEMGDAPNEENGEEEGDESGPTEPIVDDSVIQFTRHESSVFAIALSPSSEFAVTGGQDDVGYLWRVATGETIAKLEGHTDTVADVCFNHDGTYVATGGMDGPVRVWSGTTGALVCELEGPDETQWVSWHPRGNVVLAGAASGQVWMWNVPGATCMGVFSGHTSAVTCGAFTPDGKSVVSGSDDGTFILWDPKTGEPVLRMGPTTNQFHDGAITTLACHPDSVMVLTGGIDHHAKLIHTKTGKVIGSLNEHTDIVTDVGFCSRCVLSAEGRFFLTLKSLFLLLLQTVTYKAGAEVVCLNWLADQPLVATGATDGIVRLWDARSGRNERSFSGHSGEIHKIAIVGGGKGVASAGEDGVVRVFAF* # ORIGINAL: g10535.t1 original gene structure, not modified by PASA NODE_312_length_27269_cov_43.1156 AUGUSTUS gene 11756 14463 . + . ID=g10535;Name=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS mRNA 11756 14463 . + . ID=g10535.t1;Parent=g10535;Name=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 11756 11880 . + . ID=g10535.t1.exon1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 11756 11880 . + 0 ID=cds.g10535.t1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 12104 12215 . + . ID=g10535.t1.exon2;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 12104 12215 . + 1 ID=cds.g10535.t1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 12374 13063 . + . ID=g10535.t1.exon3;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 12374 13063 . + 0 ID=cds.g10535.t1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 13227 13547 . + . ID=g10535.t1.exon4;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 13227 13547 . + 0 ID=cds.g10535.t1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 13883 14065 . + . ID=g10535.t1.exon5;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 13883 14065 . + 0 ID=cds.g10535.t1;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS exon 14314 14463 . + . ID=g10535.t1.exon6;Parent=g10535.t1 NODE_312_length_27269_cov_43.1156 AUGUSTUS CDS 14314 14463 . + 0 ID=cds.g10535.t1;Parent=g10535.t1 #PROT g10535.t1 g10535 MPPRSIAILGGGVSGLTAAFALRSQLKQKSKDIITVYEASSRVGGWIESKRDPQTKALCEAGPRSLRTTGVAAMATIELAYELNIHDRAVAAKNHPGVKNRFVYLDGRLVSIPMSLRGFLSLSNPITKALWNGIIRDAFTARDLEQDMQDETIHAFIARRLGPAVADLVIDPMCRGIYAGDARELSLPALMPPVEQARRSHGSLVRATVAGMFGRGNAPADGVDGAKAAKEEEVDLADVDMSETMSSNILSMLEKAAFVTAVRDGSIWSFEDGMGTLVEALKVNLESLGVNIKYNAAVTSLRPNGAGVEIKLSDGSTATADRVISALPAHNLATCFVVTGSDPSSALSYEIAGTLAQIPAVSVGVVNFAFAKQVLQRVGFGYLVPSWVKSNALGVVWDSCVFPQQEMDGGPGSRLTVMMGGHQFEKLFGNPKAFRAADLIPIAKDTLREQMGINDEPIHTDARVCVNCISQYTLGHKDRVARIRDLTRQMFGEGVVEIIGASFDGVGVNDCVHHAKLAGGRVAKST* # PASA_UPDATE: g2265.t1, single gene model update, valid-1, status:[pasa:asmbl_6981,status:12], valid-1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . gene 160 1963 . + . ID=g2265;Name=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . mRNA 160 1963 . + . ID=g2265.t1;Parent=g2265;Name=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . five_prime_UTR 160 196 . + . ID=g2265.t1.utr5p1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . exon 160 317 . + . ID=g2265.t1.exon1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . CDS 197 317 . + 0 ID=cds.g2265.t1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . exon 541 592 . + . ID=g2265.t1.exon2;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . CDS 541 592 . + 2 ID=cds.g2265.t1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . exon 935 1125 . + . ID=g2265.t1.exon3;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . CDS 935 1125 . + 1 ID=cds.g2265.t1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . exon 1348 1881 . + . ID=g2265.t1.exon4;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . CDS 1348 1881 . + 2 ID=cds.g2265.t1;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . exon 1947 1963 . + . ID=g2265.t1.exon5;Parent=g2265.t1 NODE_4112_length_2175_cov_39.0538_potentialcontaminant . CDS 1947 1963 . + 2 ID=cds.g2265.t1;Parent=g2265.t1 #PROT g2265.t1 g2265 MVEYVPFTICKEDALKRCADWASSLWFAPSQFATSPVDVKEAFVPFFIFSTSTSTRYFGQVAVHFPMRVPAHQWLTVSGQYNNFVPSLAVAATQNGQVAQALAKVGPWSPEGATSGDVATFGREQPADWRGAWASASNDLMARERAECATRVRSEYCADRVDICSETNFTATTFRVVYMPVWVGSIRHGGKDYPLVVNGMCGMVTGDRPFGAGTLGRGLEAISDVIVQGVKGIAIGGGGGKKGDAFSGADPASFGIMTGAELIRAEGALPGYTASRFYLIFPPSSGLITSNTGYVVVENGDLAS* # PASA_UPDATE: g12033.t1, single gene model update, valid-1, status:[pasa:asmbl_2648,status:12], valid-1 NODE_1799_length_9171_cov_49.5128 . gene 4641 8682 . + . ID=g12033;Name=g12033.t1 NODE_1799_length_9171_cov_49.5128 . mRNA 4641 8682 . + . ID=g12033.t1;Parent=g12033;Name=g12033.t1 NODE_1799_length_9171_cov_49.5128 . exon 4641 4667 . + . ID=g12033.t1.exon1;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . CDS 4641 4667 . + 0 ID=cds.g12033.t1;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . exon 4855 5054 . + . ID=g12033.t1.exon2;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . CDS 4855 5054 . + 0 ID=cds.g12033.t1;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . exon 5291 8682 . + . ID=g12033.t1.exon3;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . CDS 5291 8462 . + 1 ID=cds.g12033.t1;Parent=g12033.t1 NODE_1799_length_9171_cov_49.5128 . three_prime_UTR 8463 8682 . + . ID=g12033.t1.utr3p1;Parent=g12033.t1 #PROT g12033.t1 g12033 MLPVADTTWGEFGGLARTAALLRSRFDLAERDTGTNTTASIVIDTGAFLGVSPFDQYAPHNVLFGIAESIGIRSFSLTSTDVFAGSSIFLDDYDKLLKANMVCSNVVLNPNASERLKRVMQPYITPVINGVSFGVLAFVDKAFCGRAAFCGPGKEQVLRFDDPNEEATITNAVNRMLSSLTARPDIIIAVGPDSFVPSITGTKFGEYIAKAGVDIVLVTNGNYMSAVEASNASFIPPPVIDVAVGSSGYRLLVAASLADGKTIAKVDLTVDTTATARRLSVRPTTTHVVLRPCASGNSTLAFPACVNPAADIVDTLQQISEMVEQKLDSSVVGVLTTPVVEGGSNCRYVECVGGDLLTDAMRYYVPSCDIAFTNSGGIRAGFPNMNITGRDLQIAYLFGNTVSSFYLRGVHLQEAIKHGLGLITNMTTVQPGNVVNSGRYLQFSGLRLRYNPFNPIDSRILSIEIEMSPGVYAPFNSFIVYRCCTVDYLANGLDAYAMLTTNLMQRTDYGVTQEYVVRKYLAAHNPYGLNITLGSRIIIDTNITAPICIPACVHGNCSANFTCVCDDGWEGSDCGMRPADTTVGVPPINTCDLHRANGSILLRTRGAVYHFPAGVGVVILFAVLFTAEVLCVPYFTRRFSRVIHKSSNWSNTIVRTACWNRPNAIRLALLALQGIQIHAIVLNVELSNTFVDSNSKVFASIGITAFASSFFWYFWVVMAVTLLWLVYATVYILDGGTFVRTMAAGRVFLFPADQLLQVWVSAGLIPTLLNGMRAFHCWYLDDATAFMATDGVCDVTCWSHEHWGYVMVALVTILVYYPLATISALLWQDLDPHQEVRYAPHAFIVEPLIKVALVVMRVYFTSTPEAYLPIVAVICAATAFYHRQYAPCFVAWVNTPIALGYTSAACTALVLFIGVVADRREAFFAVPAIWFGAAMLVGVYLRWIYPDTLVKRADAEKTDTRAREMLMAMKKVFSLSNRRDSAVVSLTSHEQRARTSLQAGWHAHAELDGGDLPAGEGQVTIPNDADKLVRSWTPRASSVAHATARIRHIISESVCAGTLDAAAGGWFASLDPQVQWPAALYMGSESDDLFIRMVAEIYTLATMRATTPSLAFCDPRSPTEVFSADACIEHTD* # ORIGINAL: g12031.t1 original gene structure, not modified by PASA NODE_1799_length_9171_cov_49.5128 AUGUSTUS gene 147 449 . + . ID=g12031;Name=g12031.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS mRNA 147 449 . + . ID=g12031.t1;Parent=g12031;Name=g12031.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS exon 147 449 . + . ID=g12031.t1.exon1;Parent=g12031.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS CDS 147 449 . + 0 ID=cds.g12031.t1;Parent=g12031.t1 #PROT g12031.t1 g12031 MHPTQMDLYDKYAPKACDIDAPGEAGEELRDEVKDKLYARMFKDVGELYTDINDRQFAALPNYATENPAGRDQFAKWLYNNELDEKASALLNSKDLEPAQ* # ORIGINAL: g12032.t1 original gene structure, not modified by PASA NODE_1799_length_9171_cov_49.5128 AUGUSTUS gene 3210 4163 . + . ID=g12032;Name=g12032.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS mRNA 3210 4163 . + . ID=g12032.t1;Parent=g12032;Name=g12032.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS exon 3210 4163 . + . ID=g12032.t1.exon1;Parent=g12032.t1 NODE_1799_length_9171_cov_49.5128 AUGUSTUS CDS 3210 4163 . + 0 ID=cds.g12032.t1;Parent=g12032.t1 #PROT g12032.t1 g12032 MPRPHLFQPTRMDSPAKGMPPMRRHPLAPVVPPQPAPQAAAPVPMPLPADFAAAVLQVVGAPLQAVNATMAAIQHALAALAPLPGNPLPIDQVGQTNPVAAPIIAPPPLVIAPPAPAVPVAPLPAYLPGEHGLRLDVRAYTDAIGKFHGDPKKDQHTDIDQFIARLNANTEADFPPATLGTHRLRLLRCLLRGGARENLNELTQRNPNRMTYNLAVEGLPRIYRPLNRLEDLKDKFAYSTQGSQESLRDFASRKRSEALRVTDADACQIITDDDLCMTFLRGMKNQKVAAICCNHRNLTEQTRRQHIDRGQPPPVKG* # PASA_UPDATE: g13364.t1, single gene model update, valid-1, status:[pasa:asmbl_9269,status:12], valid-1 NODE_7675_length_417_cov_27.3275 . gene 2 364 . + . ID=g13364;Name=g13364.t1 NODE_7675_length_417_cov_27.3275 . mRNA 2 364 . + . ID=g13364.t1;Parent=g13364;Name=g13364.t1 NODE_7675_length_417_cov_27.3275 . exon 2 364 . + . ID=g13364.t1.exon1;Parent=g13364.t1 NODE_7675_length_417_cov_27.3275 . CDS 2 364 . + 0 ID=cds.g13364.t1;Parent=g13364.t1;5_prime_partial=true #PROT g13364.t1 g13364 RNIDIAVEGTLSLSAKAAPILRDVLFDAARSVRTLGKDAKGNTVHLSAYQAWLSAFPDPDADYEPNVPVLGSGGDFIGFYQHLGIPSMDMKHVRSPKIYPLYHSSECQNVVCVCASLKSH* # ORIGINAL: g7913.t1 original gene structure, not modified by PASA NODE_425_length_23957_cov_38.2862 AUGUSTUS gene 13139 13936 . - . ID=g7913;Name=g7913.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS mRNA 13139 13936 . - . ID=g7913.t1;Parent=g7913;Name=g7913.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 13671 13936 . - . ID=g7913.t1.exon1;Parent=g7913.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 13671 13936 . - 0 ID=cds.g7913.t1;Parent=g7913.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 13139 13331 . - . ID=g7913.t1.exon2;Parent=g7913.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 13139 13331 . - 1 ID=cds.g7913.t1;Parent=g7913.t1 #PROT g7913.t1 g7913 MSRSLAPQDTEAPRESRNDAYDDAPLPQKSRCARVGDSLLVLWDRFPRFVLGFLVSSIILSFAVEPDARMATKEFAFFVSEWFSALGFVGIGLELDIMRFIPRLRNKGGRIVLLYVLTHTTDLLLTAVVAYLAFGKYGDQHADTQHTQSAQP* # ORIGINAL: g7916.t1 original gene structure, not modified by PASA NODE_425_length_23957_cov_38.2862 AUGUSTUS gene 17606 20714 . + . ID=g7916;Name=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS mRNA 17606 20714 . + . ID=g7916.t1;Parent=g7916;Name=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 17606 18916 . + . ID=g7916.t1.exon1;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 17606 18916 . + 0 ID=cds.g7916.t1;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 19088 19216 . + . ID=g7916.t1.exon2;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 19088 19216 . + 0 ID=cds.g7916.t1;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 19575 20350 . + . ID=g7916.t1.exon3;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 19575 20350 . + 0 ID=cds.g7916.t1;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 20582 20714 . + . ID=g7916.t1.exon4;Parent=g7916.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 20582 20714 . + 1 ID=cds.g7916.t1;Parent=g7916.t1 #PROT g7916.t1 g7916 MTRQQQRRPSSVALATDPRASRASRASRVSAKCAEMGIDAYDVREAIGKGGFGSVFHAVSRADGAHVAVKVIDKRAMRSAHLVRRVRNEVEIHSLLRHPSVSELHDFFEDSRNVYLVLELCDGGDLGQYVKRHGALSECDARRLFAQVVDGVAYLHSIGIMHRDLKLSNILLTQDDMCAKIADFGLAARLDDANDKRDTLCGTPNFISPEIVARLPHGRACDVWSLGCILYTLLVGVSPFEGEGVEATLERVRRCDYVIPSTVSSQAADLISRLLESDPERRPILRDVIAHPFLAGAMPLFGSTGVGPECNPYETPVVAGGATTLGSSVRDSGLASSHVSSVRRRTMATDDGKPGVNRELFAAKAKGLQAEGVSGNRQGDRAGNCPLAPLNGRRLRPMRQEAKNVVLAVETGGHVRLEFMRDGAVYEVFRVESDGLTISIKQATDVAQTTYSLESLPIRYRRKYAYAAKFCSLVRSKTPKVTYYSDLAACILYENEPSPDFEARFYSGARLHRSAVLVATADTHAHAHSHSTNNNGVAAYVYKVTEADGTQHVIGGSTSQSNITPAVTLLLAHAAEGLKRCAAIEAGLSALEGASGTADTAPSFFPVTVSRRPAAVQTVQTAAEQKSQSAPLPSGTDHSALASHVRSTTQPPPTHAPAEAGCTRAVGVSAVSSVGASSSRRSASSCAPIVWASCLGGVVWGMQLSNGEVWLLFADGVRMGVAPSGLHVTIVDAKGTLSRMAIDASLPDDAKRRLAQLKPLFDSVVAPAHTTHPCTHPASSVV* # ORIGINAL: g7914.t1 original gene structure, not modified by PASA NODE_425_length_23957_cov_38.2862 AUGUSTUS gene 14183 15583 . - . ID=g7914;Name=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS mRNA 14183 15583 . - . ID=g7914.t1;Parent=g7914;Name=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 14918 15583 . - . ID=g7914.t1.exon1;Parent=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 14918 15583 . - 0 ID=cds.g7914.t1;Parent=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 14566 14840 . - . ID=g7914.t1.exon2;Parent=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 14566 14840 . - 0 ID=cds.g7914.t1;Parent=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 14183 14240 . - . ID=g7914.t1.exon3;Parent=g7914.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 14183 14240 . - 1 ID=cds.g7914.t1;Parent=g7914.t1 #PROT g7914.t1 g7914 MASACVSVAEFVDTQPPSAAAAPPPVEPQYRRLIRAMKPLLRSEEWWAVWVGFAFLISIWIIVQVYGLPFPQMLPWMSRPWMAYASKHILIGLPLLLVAMVGAILISFYFTNPYVFHIKWTLGLLFLWFLSLVSKNIGAQVWVHKIGFGDAIWTIIIGMIFSNTIYSVRRAPKDPETGAAPAHNLPMWLYPVVKPEFYIKISVVLLLTNFSEIGHLGLRGFLEAIVMVGGATICGSSAATAIVSAIGAEQATGQLAIAILSIFTVPQIPLLPILSKAFALDFNDQTAGAWIGGSVDSTGAVIASATIRNGDTVSTAAIVKMIQNTLIGPITL* # PASA_UPDATE: g7917.t1, single gene model update, valid-1, status:[pasa:asmbl_7150,status:12],[pasa:asmbl_7153,status:12],[pasa:asmbl_7154,status:12], valid-1 NODE_425_length_23957_cov_38.2862 . gene 21246 23925 . - . ID=g7917;Name=g7917.t1 NODE_425_length_23957_cov_38.2862 . mRNA 21246 23925 . - . ID=g7917.t1;Parent=g7917;Name=g7917.t1 NODE_425_length_23957_cov_38.2862 . exon 23056 23925 . - . ID=g7917.t1.exon1;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . CDS 23056 23925 . - 0 ID=cds.g7917.t1;Parent=g7917.t1;5_prime_partial=true NODE_425_length_23957_cov_38.2862 . exon 22801 22889 . - . ID=g7917.t1.exon2;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . CDS 22801 22889 . - 0 ID=cds.g7917.t1;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . exon 22350 22461 . - . ID=g7917.t1.exon3;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . CDS 22350 22461 . - 1 ID=cds.g7917.t1;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . exon 22012 22096 . - . ID=g7917.t1.exon4;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . CDS 22012 22096 . - 0 ID=cds.g7917.t1;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . exon 21246 21759 . - . ID=g7917.t1.exon5;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . CDS 21695 21759 . - 2 ID=cds.g7917.t1;Parent=g7917.t1 NODE_425_length_23957_cov_38.2862 . three_prime_UTR 21246 21694 . - . ID=g7917.t1.utr3p1;Parent=g7917.t1 #PROT g7917.t1 g7917 ETSRQRDPPLQSRNASRGIAPIGSGNFHRSRVGSGGAYGRSGSASSATGTDYGIALVNAMTIRPLALNSRGAAGGGKASSTLDVGGGGSRPGSGGYGAATVRVESAGKQSRPGVVYRYGQTQQQQQQQSQLRDAVALAGGLPIQRTRRPSQPVGGSPGQRGVGPLGNIGVSGAGGGNAGNAGNGGISESILRGTSYHMGPAKSPSPVPSNAGSPTPLVGWGSRPGTSNGSQRRLPPISRDGLPVGAGGNGGNGVIQIASVPSTVSLALTDFVQGIPYGGDGDPHRSGSPPLWRGRASSSATQRVSSARSETAVNSAVYAGRQSPTGPQRRPSSRTQLHERPSGAQQQQPRVGSSGSRSYTPVNRRQTVTPSGVGMGGADEWPLAQGVALVPGLQRRPKPVSTTTVR* # PASA_UPDATE: g7911.t1, single gene model update, valid-1, status:[pasa:asmbl_7151,status:3], valid-1 NODE_425_length_23957_cov_38.2862 . gene 2811 9677 . + . ID=g7911;Name=g7911.t1 NODE_425_length_23957_cov_38.2862 . mRNA 2811 9677 . + . ID=g7911.t1;Parent=g7911;Name=g7911.t1 NODE_425_length_23957_cov_38.2862 . five_prime_UTR 2811 2942 . + . ID=g7911.t1.utr5p1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 2811 3083 . + . ID=g7911.t1.exon1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 2943 3083 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 3397 3521 . + . ID=g7911.t1.exon2;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 3397 3521 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 3754 3893 . + . ID=g7911.t1.exon3;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 3754 3893 . + 1 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 4220 4278 . + . ID=g7911.t1.exon4;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 4220 4278 . + 2 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 4649 4708 . + . ID=g7911.t1.exon5;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 4649 4708 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 5089 5175 . + . ID=g7911.t1.exon6;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 5089 5175 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 5305 5343 . + . ID=g7911.t1.exon7;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 5305 5343 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 5740 5850 . + . ID=g7911.t1.exon8;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 5740 5850 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 6358 6568 . + . ID=g7911.t1.exon9;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 6358 6568 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 6887 7206 . + . ID=g7911.t1.exon10;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 6887 7206 . + 2 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 7470 7665 . + . ID=g7911.t1.exon11;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 7470 7665 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 7860 8524 . + . ID=g7911.t1.exon12;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 7860 8524 . + 2 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . exon 8758 9677 . + . ID=g7911.t1.exon13;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . CDS 8758 9609 . + 0 ID=cds.g7911.t1;Parent=g7911.t1 NODE_425_length_23957_cov_38.2862 . three_prime_UTR 9610 9677 . + . ID=g7911.t1.utr3p1;Parent=g7911.t1 #PROT g7911.t1 g7911 MGKDKDKGKGGNAADSGVFTSSSNALTPVSLESEFVVKYDDLEVKGEIGRGSYGIVCEGRLHGSPVAIKRLQMPERLQADFNAEVALLKRLRHPNIILFLGATVPPDPLCIVIELAEKGTLEHIIAAESEEIGRARRVHYATEIARGMNYLHYAGIIHHDLKPTNVLVSAADVCKVSDFGLSKIINFNATSVTNRGGPGTIVYTAPEVFRGDRISAKADVYSFAICLWELFTRQVPFKGLHVHAICFAVVATHKRPEIDEDWEEDYAQLVRECWDPEPRARPSFDAIIGRLEGMQSAVVTVCPTTGKRVVHEQAPINAPRHTFDDPRLWTVTRVSEWLRGRGLASHSATFTANDVDGRVLLSLSSDDMRTALGIKSFGERRTLELEISALCKLIEAHDVRLRARHVEIVRTAASDDNVLEDGDDEWAQKDALCDSCYSSFSRVSGGEVVHLQRGHEFVDSRCPSLAPGSAHAMEDFGACFICNKRVTEDDIGMVCKGCRFVVHSRCRVLIEWPCSSPANHVTSAGTGADTSNGGITASTASSHGLHAPTAPSRPSAMGLAAHVSQSTGHIERHHALSSQPPPQPSSHAPSRDTNRQHHEALQVVGRQQAITHADQGHVGDGHVSEQVPGARGLRPSYSTGSCASVGQLAQGSASLISASLSMWSMHGGSHSASADSNVPRRHSLRQSIRDAFFGKSRHSHRTSSVELPESVKEEAVQRILGLLLYSIPQGEGFLRNGNAKRCFNLYRKTAVDCLHIAEGLHRPVVPGPQQLHHGNSHAHNDHHDAVHASSTASSLVAGASSLSPRQASTASPASSRKEHRQSLPSALSVASGEEVRAAAPRLSPISKSLSLSSAPSAVAITPARPQQQGSAHNKSTSPQTRSPHAERHILPASTNAGGAPTDGKLSVEGRGLLRGSATPTSDTFEGFAFGVVVKGTITHALSVAEDEKDMTYHERALELRRAFDLVLEKEGIFRTRPQMETAVAFTEKDNPEDDFVEISIA* # PASA_UPDATE: g7912.t1, single gene model update, valid-1, status:[pasa:asmbl_7149,status:12], valid-1 NODE_425_length_23957_cov_38.2862 . gene 9742 12517 . - . ID=g7912;Name=g7912.t1 NODE_425_length_23957_cov_38.2862 . mRNA 9742 12517 . - . ID=g7912.t1;Parent=g7912;Name=g7912.t1 NODE_425_length_23957_cov_38.2862 . exon 9742 12517 . - . ID=g7912.t1.exon1;Parent=g7912.t1 NODE_425_length_23957_cov_38.2862 . CDS 9947 12517 . - 0 ID=cds.g7912.t1;Parent=g7912.t1 NODE_425_length_23957_cov_38.2862 . three_prime_UTR 9742 9946 . - . ID=g7912.t1.utr3p1;Parent=g7912.t1 #PROT g7912.t1 g7912 MPSLPCAACAAGAWLFTVVVVSVFAISPSSAQFLTGAIAICDTTGQGNPNLVTGGSASATLYTISGQTGKVTATFDLPRVNGGVPSSITCADFRSRGYQDVAVHVAPATGAAGRTTVVILDGATFSVRLNMTVDASLSSPGGLQLASGDVDGDGEMDLVVASGEGAAAASIAVYNGTSGSLRYGPFNPFAGSAYADGVSLATVDLGADGTDEIVIGQLTASPLVRVVRLVGSTFAPVVDITAFQSLAPYATAGVRIAACAPPPKSMAAIVAFPSAAIRADAVKATSVVLVAGTYDAVNRTADVTTPELRAALDAAGAAAVRMVTQGSQMTFSAFNGIPEYKSKVDIMGLVYPPLTEAYVAAVDARAQGASVPSLAGFVFAAASGESAQLCAANASTSAWKVILQPPFFVAPRRRYKSPYYIAYTYDNLTADFATASRGNSSQWAADPQSKWYLASSMARYTGWGPQPALFPPLPSVDALPPGWLRERYIASLQSLVGKATYQHHHVPNWVPSSDVWRWNGVLVGAHSAGLDCSDFTSWGWNFGIGMYLTTAIAAQAMLQGAPAQWNGLSVAFKNVSVDVTNYDALVATLLPADMLYVRACPTCSISHVISWLGYTGRCRASVAQCPPLVIDSTGQGALDSLGISVPTGPNIHPFVKNTYYFLSLSHVVRVVQADGLVYSAGDARSTTAVGPRTAATTTAARMPATTVLNPTSTTTTTTTATTTTTTAARMPATTKLNPTSTTTTTASIEGGRSGGGGGSATDGTASDASSSPSSSGVSAGAAAGAAIGGVVAVAAVAVCVVLYRRRTGAIRGSYGRGSNDASINVVMNPVLNSEYRSHAGHALNTDADYVRKGQRV* # ORIGINAL: g7910.t1 original gene structure, not modified by PASA NODE_425_length_23957_cov_38.2862 AUGUSTUS gene 599 2022 . + . ID=g7910;Name=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS mRNA 599 2022 . + . ID=g7910.t1;Parent=g7910;Name=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 599 694 . + . ID=g7910.t1.exon1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 599 694 . + 0 ID=cds.g7910.t1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 903 1050 . + . ID=g7910.t1.exon2;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 903 1050 . + 0 ID=cds.g7910.t1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 1227 1273 . + . ID=g7910.t1.exon3;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 1227 1273 . + 2 ID=cds.g7910.t1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 1407 1466 . + . ID=g7910.t1.exon4;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 1407 1466 . + 0 ID=cds.g7910.t1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 1648 1775 . + . ID=g7910.t1.exon5;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 1648 1775 . + 0 ID=cds.g7910.t1;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 1950 2022 . + . ID=g7910.t1.exon6;Parent=g7910.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 1950 2022 . + 1 ID=cds.g7910.t1;Parent=g7910.t1 #PROT g7910.t1 g7910 MSLNYVDRDPYPPAPLASEDPRTLPNRELDRKIIVAVDGSDACMVAFDWAVDQFMRPNDVLIIVSIHSPLTVQNGRRISLKPDFTFPVSEWKSNVEESIKEVRENAKIFEDKCKEKGLLHQVVLLHGTPGEAICQATEMLRPVALIMGSRGRGAVKRQVATLLGSVSDYCAHNAKCPVIIIKE* # ORIGINAL: g7915.t1 original gene structure, not modified by PASA NODE_425_length_23957_cov_38.2862 AUGUSTUS gene 15782 16403 . - . ID=g7915;Name=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS mRNA 15782 16403 . - . ID=g7915.t1;Parent=g7915;Name=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 16397 16403 . - . ID=g7915.t1.exon1;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 16397 16403 . - 0 ID=cds.g7915.t1;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 16168 16252 . - . ID=g7915.t1.exon2;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 16168 16252 . - 2 ID=cds.g7915.t1;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 15890 15986 . - . ID=g7915.t1.exon3;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 15890 15986 . - 1 ID=cds.g7915.t1;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS exon 15782 15799 . - . ID=g7915.t1.exon4;Parent=g7915.t1 NODE_425_length_23957_cov_38.2862 AUGUSTUS CDS 15782 15799 . - 0 ID=cds.g7915.t1;Parent=g7915.t1 #PROT g7915.t1 g7915 MEGCTFELGFGPPSKYFTCRVCRWWHYLLFRRAMGLVDPVWSAGAHANLPTSPVLTFAPAEHTHPYSN* # ORIGINAL: g5603.t1 original gene structure, not modified by PASA NODE_5476_length_835_cov_1329.01 AUGUSTUS gene 28 835 . + . ID=g5603;Name=g5603.t1 NODE_5476_length_835_cov_1329.01 AUGUSTUS mRNA 28 835 . + . ID=g5603.t1;Parent=g5603;Name=g5603.t1 NODE_5476_length_835_cov_1329.01 AUGUSTUS exon 28 835 . + . ID=g5603.t1.exon1;Parent=g5603.t1 NODE_5476_length_835_cov_1329.01 AUGUSTUS CDS 28 835 . + 0 ID=cds.g5603.t1;Parent=g5603.t1 #PROT g5603.t1 g5603 MYANQAVTVSVHLSGDPTETVTVSPVIGGDAGSIASIVCGAEQSATVTFSRADYGSIKTCVVTAGGSAGAGSGSFGFSGGYPGGSAGVAGVEVVAVPSVSVRVERTALNTEETTVLYVRLSSRVLGGARVGVTSSDGSAAQLSVGEVVFGSGNWDVEQSVTVTSGAHAGTSDLSAAATALERGDAGAVAGQSVTVRVVARPVLVIGDGLVRLHPGQSATVGVRLSSVPIDTTTVVVSAVDAGKLTLGGATRLTFSVSDYATVQTVTVTA # PASA_UPDATE: g3211.t1, single gene model update, valid-1, status:[pasa:asmbl_7573,status:12], valid-1 NODE_4742_length_1282_cov_28.9925 . gene 320 1086 . - . ID=g3211;Name=g3211.t1 NODE_4742_length_1282_cov_28.9925 . mRNA 320 1086 . - . ID=g3211.t1;Parent=g3211;Name=g3211.t1 NODE_4742_length_1282_cov_28.9925 . five_prime_UTR 983 1086 . - . ID=g3211.t1.utr5p1;Parent=g3211.t1 NODE_4742_length_1282_cov_28.9925 . exon 914 1086 . - . ID=g3211.t1.exon1;Parent=g3211.t1 NODE_4742_length_1282_cov_28.9925 . CDS 914 982 . - 0 ID=cds.g3211.t1;Parent=g3211.t1 NODE_4742_length_1282_cov_28.9925 . exon 320 673 . - . ID=g3211.t1.exon2;Parent=g3211.t1 NODE_4742_length_1282_cov_28.9925 . CDS 320 673 . - 0 ID=cds.g3211.t1;Parent=g3211.t1;3_prime_partial=true #PROT g3211.t1 g3211 MNEFKRWCPSMRPFMLHGSKDERAELVKQQLLPGDWDVCVTSYEIAIIEKAHLRKFTWRYVIMDEAHRIKNENSKLSEIMREFKAKNRMLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFNVMGADQDEVIKRLHQ # PASA_UPDATE: g7587.t1, single gene model update, valid-1, status:[pasa:asmbl_6937,status:12], valid-1 NODE_4087_length_2205_cov_61.1582 . gene 28 1450 . - . ID=g7587;Name=g7587.t1 NODE_4087_length_2205_cov_61.1582 . mRNA 28 1450 . - . ID=g7587.t1;Parent=g7587;Name=g7587.t1 NODE_4087_length_2205_cov_61.1582 . five_prime_UTR 1223 1450 . - . ID=g7587.t1.utr5p1;Parent=g7587.t1 NODE_4087_length_2205_cov_61.1582 . exon 28 1450 . - . ID=g7587.t1.exon1;Parent=g7587.t1 NODE_4087_length_2205_cov_61.1582 . CDS 28 1222 . - 0 ID=cds.g7587.t1;Parent=g7587.t1;3_prime_partial=true #PROT g7587.t1 g7587 MSDVVAVGFNLLAPETVVHHIVPYLSNVDVSSLAKVNRALHVHLRQKRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVLEGGNRGNEHRDFASFAGVYGVSFKTDHISSDLTPLYGVKQLVVSCLYLDATPFTNLQRFSMKCYGSVRNLAALSMVVDIELKNVDVDSIEFLGAERVSLMSCHLANSCRITDISGLRNACYVHLSGLEGLVDVSPLANAREVTIEGCKLVSQSSLRALGRVRKLHLPDLKFSAIPAEFAHVHTLELSTEILEDVSETRTVHTLILGGLYNVDVTCLGRVHTLVLNGLYVDDGILATIGNVHTLSLRGCQFEESPNMSLLTGVHSLDLSEALGIEDASALGYIHTLNLRDCNIVDVSSLGSCYSLNISRTAVVDVSML # PASA_UPDATE: g8348.t1, single gene model update, valid-1, status:[pasa:asmbl_203,status:3], valid-1 NODE_1053_length_14384_cov_40.0683 . gene 6570 10006 . - . ID=g8348;Name=g8348.t1 NODE_1053_length_14384_cov_40.0683 . mRNA 6570 10006 . - . ID=g8348.t1;Parent=g8348;Name=g8348.t1 NODE_1053_length_14384_cov_40.0683 . five_prime_UTR 9955 10006 . - . ID=g8348.t1.utr5p1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 9786 10006 . - . ID=g8348.t1.exon1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 9786 9954 . - 0 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 9489 9628 . - . ID=g8348.t1.exon2;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 9489 9628 . - 2 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 9173 9297 . - . ID=g8348.t1.exon3;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 9173 9297 . - 0 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 8838 8991 . - . ID=g8348.t1.exon4;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 8838 8991 . - 1 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 8209 8494 . - . ID=g8348.t1.exon5;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 8209 8494 . - 0 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 7744 7925 . - . ID=g8348.t1.exon6;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 7744 7925 . - 2 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 7234 7471 . - . ID=g8348.t1.exon7;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 7234 7471 . - 0 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . exon 6570 6875 . - . ID=g8348.t1.exon8;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . CDS 6787 6875 . - 2 ID=cds.g8348.t1;Parent=g8348.t1 NODE_1053_length_14384_cov_40.0683 . three_prime_UTR 6570 6786 . - . ID=g8348.t1.utr3p1;Parent=g8348.t1 #PROT g8348.t1 g8348 MALVRIFIAVVAACAVVGTMAELKFGKFNLEEELAMTHDFRNGRDRRAEPAADENMVLVENPLAVASMSKCLDGTTHKYYVDLHPGSTKWIILLEPGGVCFGPTDCIERANSSLGSSNFFSDSFKGLFTMSDDATINPDFHNWNKIFVPYCSGDAFTGTRAVPDANSWGLVFTGHRIVMSVVEDLYVNRGMSLATEIILSGQSAGGVGVFVNLDYVANRVSPIPIKGLSDSGWFHSFPSVYEDFTNTNPDNAAIVSPFRLLFNYVFMGVADEDCLATVSPADRGFCMLGWKAFPHIQTPLFLMAFRWDTYIMEVFALMPMPPQNTPFYNAYSVAAGNYQRSLVDLFAAGKPQNGLFFSDCWAHVYAHKIRIETFQYKVRGSRAYDAFSNWYFNRELSYKTRITDEIGANPDTCNDSCCNPTYCFGTCKATPDYTPNQIWGFEFEGWKQSFASWKAGNQCA* # PASA_UPDATE: g8347.t1, single gene model update, valid-1, status:[pasa:asmbl_202,status:12],[pasa:asmbl_205,status:12], valid-1 NODE_1053_length_14384_cov_40.0683 . gene 1705 4275 . - . ID=g8347;Name=g8347.t1 NODE_1053_length_14384_cov_40.0683 . mRNA 1705 4275 . - . ID=g8347.t1;Parent=g8347;Name=g8347.t1 NODE_1053_length_14384_cov_40.0683 . five_prime_UTR 4216 4275 . - . ID=g8347.t1.utr5p1;Parent=g8347.t1 NODE_1053_length_14384_cov_40.0683 . exon 3212 4275 . - . ID=g8347.t1.exon1;Parent=g8347.t1 NODE_1053_length_14384_cov_40.0683 . CDS 3212 4215 . - 0 ID=cds.g8347.t1;Parent=g8347.t1 NODE_1053_length_14384_cov_40.0683 . exon 1705 2923 . - . ID=g8347.t1.exon2;Parent=g8347.t1 NODE_1053_length_14384_cov_40.0683 . CDS 2029 2923 . - 1 ID=cds.g8347.t1;Parent=g8347.t1 NODE_1053_length_14384_cov_40.0683 . three_prime_UTR 1705 2028 . - . ID=g8347.t1.utr3p1;Parent=g8347.t1 #PROT g8347.t1 g8347 MASQSGRQQPVNLRRYLDGQYANDKDILREFLARSPLFDLSLNRYITIDGYRDLTLQRAKGLLQLPLIKDQFEVMTSEAPGCLQRGFALGDIFAMTDLSVNVKMGVMTWLFGGAVICLGSDEHRERWFKPIAANKFTGMFCMTEIGHGSNVRQLETEARFDPSTQEFVIHTPNDSARKCYIGNALQGEYAIVFAQLIIGGESKGPHAFVVPVRDKTGLFPGIRVEDLGEKEGLNGVDNGVIAFSHVRVPRANLLNRFADVQPDGSYTTSIHSPTKRFNAMLAALVGTRVALSGAAVTSMKVGLTIAIRYAHKRKQFGPSATEEQTIMGYQSHQLRLMPPLATTLALTFLLRHAGSQLEACVLAKDEGNREVQALCAGLKAYATWRNVATLQTCRECCGGQGFMSVNRLSQIKCDSDVFVTFEGDNVVLMQQVAKDLLAQYARQFEGGAISGLLKYVRGGMSMAMAGSALAGGRGTVGTYEFATNAMRYREDRLLQTLAARLFSSVKRRGEEPFGAWNSCLDHIMSLAATHVERRALEQLHVAANECPDADAQSALRLACDVFGLHVVHAERGWFLEQNYISRAESREVRALFIRACGALSQRSLEIVDAFGIPESCLAPISGAPSDKSWARP* # ORIGINAL: g8349.t1 original gene structure, not modified by PASA NODE_1053_length_14384_cov_40.0683 AUGUSTUS gene 10882 14296 . + . ID=g8349;Name=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS mRNA 10882 14296 . + . ID=g8349.t1;Parent=g8349;Name=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 10882 10983 . + . ID=g8349.t1.exon1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 10882 10983 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 11246 11364 . + . ID=g8349.t1.exon2;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 11246 11364 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 11808 11922 . + . ID=g8349.t1.exon3;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 11808 11922 . + 1 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 12042 12191 . + . ID=g8349.t1.exon4;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 12042 12191 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 12545 13098 . + . ID=g8349.t1.exon5;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 12545 13098 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 13267 13336 . + . ID=g8349.t1.exon6;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 13267 13336 . + 1 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 13675 13896 . + . ID=g8349.t1.exon7;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 13675 13896 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 14090 14296 . + . ID=g8349.t1.exon8;Parent=g8349.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 14090 14296 . + 0 ID=cds.g8349.t1;Parent=g8349.t1 #PROT g8349.t1 g8349 MAETDSVVARHRCVAAGLPMVLGGNAFAKVNAAKVLVIGAGGIGCELLKNLVLSGFQNIEVIDLDTIELSNLNRQFLFQKRHVGQSKAKVARESVLRFNPGVNIKAHHGDIKTSEFNLDFFAGFDIVLNALDNNSARAHVNRMCLSAGIPLVESGSGGYLGQVTVIRKGITECFECRPKPPPKTFPVCTIRNTPSQPIHCIVWGKYLFGQLYGHADDENDVSPDTEDPDAAADRAAASATSSETKTADEPRKPQPLREWAAKHHFDGDALFKRLFIDDVRTLLSMKSLWTKRAPPRVIDDDVVRSEDAASVSGSSGDAGSLASAEGRGEEARVADQQMWTVANCIAKFVTSANALRDRVQSLASQGKEAELEWDKDDATAMDFVTAASNLRSLSFGIPRKSRFDVKSMAGNIIPAIASTNAIVSGLIVLEAIRILSANTDACRGTYLSRKPNSRRQLLCFESLSKPNPKCYVCSKQEITVRVNVNTMTLGEDVLQCLLVVRAYMCCCFSQGM* # ORIGINAL: g8346.t1 original gene structure, not modified by PASA NODE_1053_length_14384_cov_40.0683 AUGUSTUS gene 172 1221 . + . ID=g8346;Name=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS mRNA 172 1221 . + . ID=g8346.t1;Parent=g8346;Name=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 172 255 . + . ID=g8346.t1.exon1;Parent=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 172 255 . + 0 ID=cds.g8346.t1;Parent=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 641 760 . + . ID=g8346.t1.exon2;Parent=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 641 760 . + 0 ID=cds.g8346.t1;Parent=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS exon 1147 1221 . + . ID=g8346.t1.exon3;Parent=g8346.t1 NODE_1053_length_14384_cov_40.0683 AUGUSTUS CDS 1147 1221 . + 0 ID=cds.g8346.t1;Parent=g8346.t1 #PROT g8346.t1 g8346 QSWTSSLPKNLWLAVNESGIHILKRKEKEPLVSYSYKNIVNYSPSLRNLMIVTESLSRGTKYVFNTSQGSQIAHLIRDYTQFIVQKRVPNKA* # PASA_UPDATE: g10727.t1, single gene model update, valid-1, status:[pasa:asmbl_4495,status:3], valid-1 NODE_2523_length_6010_cov_39.4736 . gene 4746 5822 . + . ID=g10727;Name=g10727.t1 NODE_2523_length_6010_cov_39.4736 . mRNA 4746 5822 . + . ID=g10727.t1;Parent=g10727;Name=g10727.t1 NODE_2523_length_6010_cov_39.4736 . five_prime_UTR 4746 4863 . + . ID=g10727.t1.utr5p1;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . exon 4746 4947 . + . ID=g10727.t1.exon1;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . CDS 4864 4947 . + 0 ID=cds.g10727.t1;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . exon 5085 5168 . + . ID=g10727.t1.exon2;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . CDS 5085 5168 . + 0 ID=cds.g10727.t1;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . exon 5374 5822 . + . ID=g10727.t1.exon3;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . CDS 5374 5535 . + 0 ID=cds.g10727.t1;Parent=g10727.t1 NODE_2523_length_6010_cov_39.4736 . three_prime_UTR 5536 5822 . + . ID=g10727.t1.utr3p1;Parent=g10727.t1 #PROT g10727.t1 g10727 MEQLNREGADGEAASTDTRKNQNYPLIKYSDMMEEIRIEAMEMVVTAVEKFPTNNESSARMIKETMDKKYGSSWHVVVGEGFGFEITNEVKSLQFMYFGSIAVLLWKCS* # PASA_UPDATE: g10726.t1, single gene model update, valid-1, status:[pasa:asmbl_4496,status:3], valid-1 NODE_2523_length_6010_cov_39.4736 . gene 566 3990 . - . ID=g10726;Name=g10726.t1 NODE_2523_length_6010_cov_39.4736 . mRNA 566 3990 . - . ID=g10726.t1;Parent=g10726;Name=g10726.t1 NODE_2523_length_6010_cov_39.4736 . five_prime_UTR 3681 3990 . - . ID=g10726.t1.utr5p1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . exon 3095 3990 . - . ID=g10726.t1.exon1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . CDS 3095 3680 . - 0 ID=cds.g10726.t1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . exon 2438 2578 . - . ID=g10726.t1.exon2;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . CDS 2438 2578 . - 2 ID=cds.g10726.t1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . exon 1839 2104 . - . ID=g10726.t1.exon3;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . CDS 1839 2104 . - 2 ID=cds.g10726.t1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . exon 1440 1613 . - . ID=g10726.t1.exon4;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . CDS 1440 1613 . - 0 ID=cds.g10726.t1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . exon 566 895 . - . ID=g10726.t1.exon5;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . CDS 707 895 . - 0 ID=cds.g10726.t1;Parent=g10726.t1 NODE_2523_length_6010_cov_39.4736 . three_prime_UTR 566 706 . - . ID=g10726.t1.utr3p1;Parent=g10726.t1 #PROT g10726.t1 g10726 MGDAAATTVSALGAGRGELDLNGEHGDSNPGLNGHNGGGAKADDHRTTVTASGPLHERRPIPSLILVGPNSGSTEDLTVTEQLAEESHATIFVSSSSTDAIDQQKDPSAGVNGENGVFVVQPLKRLSLDNNQRLRSTSDASVSSVDSASNNGPIVEEDGLHRKGSSGAAWRKVKAIGKIIMTYNQKAWVQLAGHKDAFVRRHPGMLCKRASDLEKKALEALMSDDLKQYVPRYDSEVVVNGEVYIQMQDLLDDYDNPSVMDIKMGQRTFLESEVNNHELRKDLYQKMIEMDPTEPTPEEHIAGAITKLRYMQYREKQSSTSTLGFRVEGVKLANEPVMNNFKHVKTRDDVLVVVREFVNGDMALRDSFVDRLDAIRGTLEVSQFFKEHEVVGSSLLFAYDHTGQTGVWLIDFGKTNRAKRKLSHRDAWKLGNEEDGYLFGLDNLISVWKDF* # PASA_UPDATE: g5248.t1, single gene model update, valid-1, status:[pasa:asmbl_663,status:12], valid-1 NODE_1179_length_13354_cov_37.9302 . gene 7989 13029 . - . ID=g5248;Name=g5248.t1 NODE_1179_length_13354_cov_37.9302 . mRNA 7989 13029 . - . ID=g5248.t1;Parent=g5248;Name=g5248.t1 NODE_1179_length_13354_cov_37.9302 . exon 8938 13029 . - . ID=g5248.t1.exon1;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . CDS 8938 13029 . - 0 ID=cds.g5248.t1;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . exon 8766 8828 . - . ID=g5248.t1.exon2;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . CDS 8766 8828 . - 0 ID=cds.g5248.t1;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . exon 8470 8583 . - . ID=g5248.t1.exon3;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . CDS 8470 8583 . - 0 ID=cds.g5248.t1;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . exon 7989 8263 . - . ID=g5248.t1.exon4;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . CDS 8069 8263 . - 0 ID=cds.g5248.t1;Parent=g5248.t1 NODE_1179_length_13354_cov_37.9302 . three_prime_UTR 7989 8068 . - . ID=g5248.t1.utr3p1;Parent=g5248.t1 #PROT g5248.t1 g5248 MQVIWEGNAYELTIIGAGGLGKLEVEYLEERDRQTKCLDYDIVPVDVGIERRFRLFNNGAVPLTLRIDTGIPEFRVAQVGDPVLTYAELGGVALLREVMPFDPPPPLASTVTIYLQDKSFVEVRCSFRPSTSAVYQGTMSVTSEFNATTIPVKGKGGTIRFMHSGDLNFGDLATDHVYTRQVVVTNGGTIPALVAMSWLVANGPERTAETASRLEFVDAAHAVRPIREWLRTEVLLAEQRLREERLDRLAKQRLAAAGGDAASSSHTHVTTATPKDPLQTLLDARQALRKRKESIDSSHARFAPAQLWEMIKRLVVTPVDVLKTANVEARAGQSPTVLDRERDLRGTAYARIKSRFITSMQPAECVPHLEVTPEAAVVAAFGTAMFTVSVCVADEASLMATLVCTPMVPGIRSHEVAMSATARAVSIVVDDAGLLNFERQPLGETEILERTFSNYGHKDVAFRVRHANPGLTAEPSHGRLVVGASVKVRFVFSPQTEGLSRQPVFFDTDCSSPVKLDFFGGGGTPRAHVPDRFDIGRCMIGKDTTEHLEITNRGDAMLHLASFALDTSETFSMGVGWPRARVTVAPGEKYRLPICFHPKAEELYGGRLMFVAANRPIEVALCGAGRESVLLIDKGAIVFSDCIVGNRYEEHIELSNVGDVNYPVELSLAMPFEDIAFDPSSTIIAPFQKTYVRVIYRPQDSVRTARTILITSPYSRHDIPMQIHAGIAGIALSTEVLDYGMFLHSAPKTMMLVIRNVGTVRTNFKLRCDARPPTLRLSKAEASLNPKQHIEIAATFALTMLGSFSDTLRLETDAVNVSQAIDVRGQCEEARVKAEEFAEVNLGPCPVMEVATKTFNVENYGRFPLTYEMKASFPIKVTPATGEIEGSSKGVLTVTWNPSGAYQLRSVVRFRSNAGNFDIVVKGTSAFPEMTVLNTYLDYGVCAVGHPHTRSFSIVNKGKVRVSWAVPSMRGGYSLSANQGVLQPRETGTVDVIFAPQQTGKYNGSFIVECKGHYKEITLVGSGGKLEFDVHPQALQIGQCPCGQRVPVFIDLRNTGDVAVNLRRVGAECHDGATLQWSCPESVPPRTTVHMKILVTAAQTGMFSGSVSLAAHERIITVPLVGEGVMVVLPAHVRAALEAEHLSCLDCPDPLSSDPILEKRAVVPLSDRYVRRRLEKRLRKLAGEVFEDSSDEEVEADGVVYDTARPGEDNDIIAEEGVADMGVHTEPVYGGVESTRDTEASRDDALTDPVASAAINPFADTEAEGAPVAAEEDNVALRHQGGGVGASDIVDFATVDGSGANDAADANAESGMGAEEDDAGPNAEQLPIAASSSGSHEIHEASSMPALPNCASSPQNGPRTAWIMEPESLNREAIVKKMIEYPYLEIMDVGIEDITWMIEPDIDGRRVDLSNILARPPPYPKKKADKESRYHGDNRAMSMMLARDRHAPASGFIAEDAEGGIALGIGVRIYNKPRYDHMDRARGGAAH* # ORIGINAL: g5247.t1 original gene structure, not modified by PASA NODE_1179_length_13354_cov_37.9302 AUGUSTUS gene 4259 6245 . - . ID=g5247;Name=g5247.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS mRNA 4259 6245 . - . ID=g5247.t1;Parent=g5247;Name=g5247.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS exon 4809 6245 . - . ID=g5247.t1.exon1;Parent=g5247.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS CDS 4809 6245 . - 0 ID=cds.g5247.t1;Parent=g5247.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS exon 4259 4636 . - . ID=g5247.t1.exon2;Parent=g5247.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS CDS 4259 4636 . - 0 ID=cds.g5247.t1;Parent=g5247.t1 #PROT g5247.t1 g5247 MAPQRLKILAALFVVGLQLVFACAYLRMTTVTVRIPKSLCALMPFVTVLENTSIPIAHRIPGQPTYAVPPPGGYAPGVPPAVDHARWPAPIMDMDAIRRCNATRADVTRVPVAACMSDSTFHPSLVRRGFSAVDPTVYEAVVSVHVAGQSDPVPGIMMLGTFVCDNCKSRAMGSVKHLVEAFAYSRDMCNGTYAFTFEGIFGVTDAQQWTLTVRVDYANFEQYVTAGRLCGRSLSPLVRFIPDGSEHCGIMRYSTVVLASAALVGLSMAAIPAAPIEAHIRKHIDMLPVCRGMQRYNGSGRWMMRAQGETDISLCRDGMAKESTEMWGPADDYVWCPYACRLRYYSHEDIRQCAQRRGIRNILFAGDSRMQNTFFDLSQRLFFGEGPPKSYDCPMVTEKNCDSYQALNISFDLLYGWGFFDGRREECFPVKCAYESLNPDQYFARRAVGKDNAISQLVARLTSKQYDVLILSEGVHLLQHYFTAEDFDILIRSLINAALNAPKPPRLFMYHTSGASIDINGRSLSATRDSTHVQNLNRLALRAFADMVPDALLLDQFEMTVTRGRDRFFDGLHFYPTSAHDTHKHPLTIGRDSNLVLWNILCNE* # ORIGINAL: g5246.t1 original gene structure, not modified by PASA NODE_1179_length_13354_cov_37.9302 AUGUSTUS gene 776 3563 . - . ID=g5246;Name=g5246.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS mRNA 776 3563 . - . ID=g5246.t1;Parent=g5246;Name=g5246.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS exon 2988 3563 . - . ID=g5246.t1.exon1;Parent=g5246.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS CDS 2988 3563 . - 0 ID=cds.g5246.t1;Parent=g5246.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS exon 776 2818 . - . ID=g5246.t1.exon2;Parent=g5246.t1 NODE_1179_length_13354_cov_37.9302 AUGUSTUS CDS 776 2818 . - 0 ID=cds.g5246.t1;Parent=g5246.t1 #PROT g5246.t1 g5246 MDSKVNADRQEELLKLAREHAEGQTYVVDALESMYITCQHVAHASPAGPSGKPLQSEFEDITIPFHELTFGEELGAGAFGRVYRGKYGADHVAIKRLACDSLSEETLVEFKNEVRIMKALRHPNVVLLLGACLEKGKYAIVLEYMENKSLFHVLHGDVDMLWGLRWRMACETARGMAHLYSRKPPIQHRDLKSLNVLVDKDFRTKISDFGLSNARSETSMRTHAGEGTLYWKAPELFRKGAKFGEKSDVYSYGVVLWELASRRVPWDKEEREGGVVLAMVLAGDRPDIPNDCPAGFARLIAACWAPRVDKRPSFASAVEACDVHVDSPSRWQPPLPLVIGSSSGGGGSPRTNAPAMDRLGTASPDADANQMLPLPPASRFDAMRLKAEQGDAHAQYNLGYCYAKGTGMLKDESMAVAWYRKAAEQGDAAAQSNLGDCYFHGNGVMKDESMAVAWYRKAAEQGNAYAQFNLGFHYDYGNGVLKDESMAVAWYRKAADQGNAGAQYSLGACYADGTGVLKDESMAVAWYRKAAEQGDAGAQYSLGFHYDYGNGVLKDKSMAVAWYQKAADQGHAAAQCNLGDCYAHGTGVPKDASTAVTWYRKAAEQGHAAAQYNLGNCYAKGISVQKDESMAIAWFRKAADQGHARAQYGLGGGYAVGIGVMKDESMAVAWLRKAADQGHADAQYVLGACYADGIGVRKDESTAVAWYRKAADQGNAGAQYNLGVCYDHGTCVMKDEAMAVAWYHKAADQGDAAAQHNLGVCYAHGTGVMKDESMAVAWFQKAADQGYAAAQYTLGVCYVCRIGVLKDEAMAVAWFQKAADQGNADAQCKLGVCYANGIGVRKDKSKAILWYRKAAEQGHAGAQNNLLNLTSS* # ORIGINAL: g2843.t1 original gene structure, not modified by PASA NODE_7239_length_457_cov_48.9162_potentialcontaminant AUGUSTUS gene 2 367 . + . ID=g2843;Name=g2843.t1 NODE_7239_length_457_cov_48.9162_potentialcontaminant AUGUSTUS mRNA 2 367 . + . ID=g2843.t1;Parent=g2843;Name=g2843.t1 NODE_7239_length_457_cov_48.9162_potentialcontaminant AUGUSTUS exon 2 367 . + . ID=g2843.t1.exon1;Parent=g2843.t1 NODE_7239_length_457_cov_48.9162_potentialcontaminant AUGUSTUS CDS 2 367 . + 0 ID=cds.g2843.t1;Parent=g2843.t1 #PROT g2843.t1 g2843 PIYDELKAIVVVGRMKNEAFELADGTIVDARRLVRTLLTYSQTRNSVETVEKYPVPIVFAQDGEFRKNMAKSVQNRLVDALSSEGKMWKVYATNKAYGKNHLQTLLSKLLASTKGQLRVPE* # PASA_UPDATE: g10668.t1, single gene model update, valid-1, status:[pasa:asmbl_1617,status:12], valid-1 NODE_1447_length_11222_cov_41.0255 . gene 384 2687 . - . ID=g10668;Name=g10668.t1 NODE_1447_length_11222_cov_41.0255 . mRNA 384 2687 . - . ID=g10668.t1;Parent=g10668;Name=g10668.t1 NODE_1447_length_11222_cov_41.0255 . five_prime_UTR 2394 2687 . - . ID=g10668.t1.utr5p1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . exon 2374 2687 . - . ID=g10668.t1.exon1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . CDS 2374 2393 . - 0 ID=cds.g10668.t1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . exon 1757 1988 . - . ID=g10668.t1.exon2;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . CDS 1757 1988 . - 1 ID=cds.g10668.t1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . exon 1235 1456 . - . ID=g10668.t1.exon3;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . CDS 1235 1456 . - 0 ID=cds.g10668.t1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . exon 701 793 . - . ID=g10668.t1.exon4;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . CDS 701 793 . - 0 ID=cds.g10668.t1;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . exon 384 545 . - . ID=g10668.t1.exon5;Parent=g10668.t1 NODE_1447_length_11222_cov_41.0255 . CDS 384 545 . - 0 ID=cds.g10668.t1;Parent=g10668.t1 #PROT g10668.t1 g10668 MADVANGHQMPDSLKDDISSFKMDGYASKFFGVHKKGLFRRKVPIKSMLQWTKDSIPAPILVMPANPKHKNVPKDAVKNFKIVQAFMGDRGMPKGFSGASQLAQSVLEKGLLFPEIRDEIFVQLIKQTTNNKRLEGNAQGWVLISLCVTMFPPSRNLESYLRNYIQQHFADSDFKVITLSKYSIKKLAKVCETGPRIRVPTVPEVERAMVAPFNPSVFNVTLDDIMQLQQDFDPEYPLPKVR* # ORIGINAL: g10670.t1 original gene structure, not modified by PASA NODE_1447_length_11222_cov_41.0255 AUGUSTUS gene 5566 10120 . + . ID=g10670;Name=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS mRNA 5566 10120 . + . ID=g10670.t1;Parent=g10670;Name=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS exon 5566 6775 . + . ID=g10670.t1.exon1;Parent=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS CDS 5566 6775 . + 0 ID=cds.g10670.t1;Parent=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS exon 7074 7225 . + . ID=g10670.t1.exon2;Parent=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS CDS 7074 7225 . + 2 ID=cds.g10670.t1;Parent=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS exon 7409 10120 . + . ID=g10670.t1.exon3;Parent=g10670.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS CDS 7409 10120 . + 0 ID=cds.g10670.t1;Parent=g10670.t1 #PROT g10670.t1 g10670 MAPIIRASHILPALVALGLFPARSDASHFIDVDYDDDAVRQKLTLCVASVCLTFGMLLTFLFRPCHPKYGQKTARTFSLAVHIGSSLSLMFFAVFAFFIGDPRIPSAAFAFTAIVAQTPTSIYHASFAYGDRAMTVPFHLIFCALLCYFSVQLLQDLTSFTLLANAFVVLHVYPWSRFFEAISSRLPSLADPDSSRAVGVIAASMLVLPAVVGMAGNLGVLLLFLLSHLVVGLVLQLRGGVRRRIVQETAPEPPSECHVSMTSLPSYNAVQEERNNVGMTSHTPHNAPHSTCAPESPSRCPSDGSLEAPMHSVALTCERSPQHQCNAHNDNGHGTSSRVGAGVGVYDSSLSEKPVPAMDHADIASNAVPPCTIETCPPSRWQWPVLPWRRRKQTDADDPRAREVFDALLAGSDGITVDLSLVIDLLVNWGATPEGARSYLSAFDPGETGLVAFDTFAKNMRPVWVLAHTRAFKGGSIVEALRDAPADFPIKTSANILLHASTSCTVNPSSTPDNSAILVSDSSPDHVDAHEQRTQRKGVLHTSKRTSVASMVTSASRECDNRGHTTAQRRAPPDHASVTVAPVDDSDALVTYRPSGGCRHSQDKLSSGGNAGSSSLGGVTEECPYCSAMSIAAPPSTPTVTGDAAFDFAVAESLVVSVQDNPSVIAVAAEASVVQASPVLSTPTFPLDWFSREDGCCNSTANLGEYDSAESSSIGVDYDDGACASELTSFSNATTITAGTDKDDRGDNYDKESVMSIVSDSMEQRLYLKACDHDGMAQARRHYTCNTDAPSPTTSDLCDPLASLSTSPVHSDAAVTYMSPFVAARLNSTCSLVRRKLAEHTEKMQQQRLDALSDELADCRFVGARASAPTYLGNTFGSLSLASTVAAGGAEHVDDALLYDVEANAGLGDVMRHCNRSGRSVSSGACSSSLFSSSSSRSLGSSLCATATDGVAQSDFDSEEEACELVSVYTVSSAPDAYSRPGVGHILNLSQELLDLSDCASLAGDNNYFSSTWDSGASSPCSSVTGGNRRSYTSACTPMPTQPVSPLSLESSIPLSTSAKWRYLSATFEQPVGDLDGSDCSSNDDCACEGTNALGWPSAAAAAVTAAATKRASYERMTECIHCNRTSPQTAPALAHYADSPITNILGASFTNDQAWLRRSVSAIVRSDADDDEESVSPDWTEWRRYVSTTPAGIDVSSPFESDSNCNVSAVCAPAAAARENADVTEDDYDRLLPSVGVHPSAAATANSFKDLHVPPAHTVVSIPPSINEATLLVTTVGSYAHGSKGAGGKVVMTATGPLSVLQRHAPNRMATASARPDDMTKPTMQHALPGDAPWRPLSKLRTLGVGKKTPLASTEV* # PASA_UPDATE: g10669.t1, single gene model update, valid-1, status:[pasa:asmbl_1618,status:12], valid-1 NODE_1447_length_11222_cov_41.0255 . gene 3073 4593 . - . ID=g10669;Name=g10669.t1 NODE_1447_length_11222_cov_41.0255 . mRNA 3073 4593 . - . ID=g10669.t1;Parent=g10669;Name=g10669.t1 NODE_1447_length_11222_cov_41.0255 . five_prime_UTR 4593 4593 . - . ID=g10669.t1.utr5p1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . exon 4325 4593 . - . ID=g10669.t1.exon1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . CDS 4325 4592 . - 0 ID=cds.g10669.t1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . exon 4026 4099 . - . ID=g10669.t1.exon2;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . CDS 4026 4099 . - 2 ID=cds.g10669.t1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . exon 3694 3848 . - . ID=g10669.t1.exon3;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . CDS 3694 3848 . - 0 ID=cds.g10669.t1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . exon 3392 3500 . - . ID=g10669.t1.exon4;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . CDS 3392 3500 . - 1 ID=cds.g10669.t1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . exon 3073 3226 . - . ID=g10669.t1.exon5;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . CDS 3143 3226 . - 0 ID=cds.g10669.t1;Parent=g10669.t1 NODE_1447_length_11222_cov_41.0255 . three_prime_UTR 3073 3142 . - . ID=g10669.t1.utr3p1;Parent=g10669.t1 #PROT g10669.t1 g10669 MRENTRESACYEGQLIFLRGHCSSDIIDFEPSHVTGLNLQPTQQRMVREVVFSHTYRYPFELVAETYFDKYSGGKDERVVAVNIIDQRLDPITKSLFTRREGILKNVIPSFARKIFGNEHFIMMEDSTIDGRRRTLALETWNVTWQDTGDMREKSTYSASDENPDWTLLEQRGTIECKRCPPVIGTLVEAFAQRLLEAGVRKGTGIFEELLAERAARSTKGGPSPVQGS* # ORIGINAL: g10671.t1 original gene structure, not modified by PASA NODE_1447_length_11222_cov_41.0255 AUGUSTUS gene 10667 11003 . - . ID=g10671;Name=g10671.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS mRNA 10667 11003 . - . ID=g10671.t1;Parent=g10671;Name=g10671.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS exon 10913 11003 . - . ID=g10671.t1.exon1;Parent=g10671.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS CDS 10913 11003 . - 0 ID=cds.g10671.t1;Parent=g10671.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS exon 10667 10797 . - . ID=g10671.t1.exon2;Parent=g10671.t1 NODE_1447_length_11222_cov_41.0255 AUGUSTUS CDS 10667 10797 . - 2 ID=cds.g10671.t1;Parent=g10671.t1 #PROT g10671.t1 g10671 MIDEQANRGFLLRTQSEKIGGFGKHEDSLPDILHSYFGIAAFSLMEMENLSPLNAALNVTQRTATHIATLHHQ* # PASA_UPDATE: g13456.t1, single gene model update, valid-1, status:[pasa:asmbl_5344,status:12], valid-1 NODE_297_length_27700_cov_43.5885 . gene 282 2302 . - . ID=g13456;Name=g13456.t1 NODE_297_length_27700_cov_43.5885 . mRNA 282 2302 . - . ID=g13456.t1;Parent=g13456;Name=g13456.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 2151 2302 . - . ID=g13456.t1.utr5p1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . exon 1685 2302 . - . ID=g13456.t1.exon1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . CDS 1685 2150 . - 0 ID=cds.g13456.t1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . exon 1350 1521 . - . ID=g13456.t1.exon2;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . CDS 1350 1521 . - 2 ID=cds.g13456.t1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . exon 1136 1209 . - . ID=g13456.t1.exon3;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . CDS 1136 1209 . - 1 ID=cds.g13456.t1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . exon 628 754 . - . ID=g13456.t1.exon4;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . CDS 628 754 . - 2 ID=cds.g13456.t1;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . exon 282 393 . - . ID=g13456.t1.exon5;Parent=g13456.t1 NODE_297_length_27700_cov_43.5885 . CDS 282 393 . - 1 ID=cds.g13456.t1;Parent=g13456.t1;3_prime_partial=true #PROT g13456.t1 g13456 MPLSGPYGSDIGDVLTSIATSSRRPSRWSPLEQRLHSRNCHLRRTIKKGPLDKIERPRRLKYACEGSLESPANLARERTESEQSLPLLCIPVGGRRVSQQEMGKVVSFARIFACALVLLLSATANAPAQEQLQLTGFQIVPNVINAAVSSDIRFVARIESVHGLVDEDDVKEEIEFVPSQIVYTSPLGDEKELFLLPSQNLMDGTRKRGNFVADLGMTRFATPGRWSIEFVLLVDVMGNQRYFFTEDLSSMGFDSSFVVSGTMADNSPPELMQVEVLNDRVVMNQTDGTLHVLIGIADDVSGLSRTSDARTPFSHVQ # PASA_UPDATE: g13460.t1, single gene model update, valid-1, status:[pasa:asmbl_5341,status:3], valid-1 NODE_297_length_27700_cov_43.5885 . gene 13222 14145 . + . ID=g13460;Name=g13460.t1 NODE_297_length_27700_cov_43.5885 . mRNA 13222 14145 . + . ID=g13460.t1;Parent=g13460;Name=g13460.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 13222 13316 . + . ID=g13460.t1.utr5p1;Parent=g13460.t1 NODE_297_length_27700_cov_43.5885 . exon 13222 13865 . + . ID=g13460.t1.exon1;Parent=g13460.t1 NODE_297_length_27700_cov_43.5885 . CDS 13317 13865 . + 0 ID=cds.g13460.t1;Parent=g13460.t1 NODE_297_length_27700_cov_43.5885 . exon 13985 14145 . + . ID=g13460.t1.exon2;Parent=g13460.t1 NODE_297_length_27700_cov_43.5885 . CDS 13985 14056 . + 0 ID=cds.g13460.t1;Parent=g13460.t1 NODE_297_length_27700_cov_43.5885 . three_prime_UTR 14057 14145 . + . ID=g13460.t1.utr3p1;Parent=g13460.t1 #PROT g13460.t1 g13460 MDAHSNSQSIERTYAMIKPDAIQHADEIIDIILRKGFKILQKKRVQLSQEQVADFYAEHQGKPFYEPLVAFMSSGPIYALVLARENAILKWRELMGPTDSVAARESAPGSIRALFGTNNRQNAVHGSDSVASANREIRFIFPDSLLYPIATGPDARDYLAKNVNPTLLQGLTELCKKKPADPLTWLAQWLLRNNPNKPQVVEPEDR* # ORIGINAL: g13463.t1 original gene structure, not modified by PASA NODE_297_length_27700_cov_43.5885 AUGUSTUS gene 22577 23179 . - . ID=g13463;Name=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS mRNA 22577 23179 . - . ID=g13463.t1;Parent=g13463;Name=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 23100 23179 . - . ID=g13463.t1.exon1;Parent=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 23100 23179 . - 0 ID=cds.g13463.t1;Parent=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 22884 22954 . - . ID=g13463.t1.exon2;Parent=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 22884 22954 . - 1 ID=cds.g13463.t1;Parent=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 22577 22677 . - . ID=g13463.t1.exon3;Parent=g13463.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 22577 22677 . - 2 ID=cds.g13463.t1;Parent=g13463.t1 #PROT g13463.t1 g13463 MKLELESLRARRRDLDQQGAIEVPRTKHSLSLFANLTSIRWDYDSEDVQGYVCNQNSADMRPFQLDPKKSSKFFITNYLWDLI* # PASA_UPDATE: g13459.t1, single gene model update, valid-1, status:[pasa:asmbl_5345,status:12], valid-1 NODE_297_length_27700_cov_43.5885 . gene 10623 12816 . - . ID=g13459;Name=g13459.t1 NODE_297_length_27700_cov_43.5885 . mRNA 10623 12816 . - . ID=g13459.t1;Parent=g13459;Name=g13459.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 12735 12816 . - . ID=g13459.t1.utr5p1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 12707 12816 . - . ID=g13459.t1.exon1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 12707 12734 . - 0 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 12550 12621 . - . ID=g13459.t1.exon2;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 12550 12621 . - 2 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 12301 12467 . - . ID=g13459.t1.exon3;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 12301 12467 . - 2 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 12084 12180 . - . ID=g13459.t1.exon4;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 12084 12180 . - 0 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 11863 11922 . - . ID=g13459.t1.exon5;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 11863 11922 . - 2 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 11539 11710 . - . ID=g13459.t1.exon6;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 11539 11710 . - 2 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 11205 11325 . - . ID=g13459.t1.exon7;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 11205 11325 . - 1 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 10989 11027 . - . ID=g13459.t1.exon8;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 10989 11027 . - 0 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . exon 10623 10754 . - . ID=g13459.t1.exon9;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . CDS 10641 10754 . - 0 ID=cds.g13459.t1;Parent=g13459.t1 NODE_297_length_27700_cov_43.5885 . three_prime_UTR 10623 10640 . - . ID=g13459.t1.utr3p1;Parent=g13459.t1 #PROT g13459.t1 g13459 MLYLEDYLETVETLPQDMQHSLTRMREMDLRGQNILDSIEKKQEAYYATIKKTKPEVRDQTFEAVRQDYAKALEFSEEKMTLVNQTYDQIDRQIRRLDQELKLFASELEADNPGLTVELEKRSLLLDQKIVVEEDIRPHKKRKASAAVALDDDAHDVSDKPLKTPKGLKSSLSAASFADLTGGGDGSASLTASGLGRKKKLKVALEDEPPVEPLLAVPMPPPEMQAIDPNEPRYCICNQVSFGEMVACDNEDCALEWFHYACVGITEPPKGKWYCEECTASMRRRGIFK* # PASA_UPDATE: g13462.t1, single gene model update, valid-1, status:[pasa:asmbl_5342,status:3], valid-1 NODE_297_length_27700_cov_43.5885 . gene 20249 22475 . + . ID=g13462;Name=g13462.t1 NODE_297_length_27700_cov_43.5885 . mRNA 20249 22475 . + . ID=g13462.t1;Parent=g13462;Name=g13462.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 20249 20283 . + . ID=g13462.t1.utr5p1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 20616 20660 . + . ID=g13462.t1.utr5p2;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 20249 20283 . + . ID=g13462.t1.exon1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 20616 20700 . + . ID=g13462.t1.exon2;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . CDS 20661 20700 . + 0 ID=cds.g13462.t1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 20869 21030 . + . ID=g13462.t1.exon3;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . CDS 20869 21030 . + 2 ID=cds.g13462.t1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 21161 21388 . + . ID=g13462.t1.exon4;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . CDS 21161 21388 . + 2 ID=cds.g13462.t1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 21572 21652 . + . ID=g13462.t1.exon5;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . CDS 21572 21652 . + 2 ID=cds.g13462.t1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . exon 21824 22475 . + . ID=g13462.t1.exon6;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . CDS 21824 21960 . + 2 ID=cds.g13462.t1;Parent=g13462.t1 NODE_297_length_27700_cov_43.5885 . three_prime_UTR 21961 22475 . + . ID=g13462.t1.utr3p1;Parent=g13462.t1 #PROT g13462.t1 g13462 MGNKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTEEAKAFAEKNNLSFIETSALDATNVELAFQNILTEIYRIVSQKSLVNDGDDSVHPPKDGQTIVVAPSESHDDKKKGGCC* # ORIGINAL: g13458.t1 original gene structure, not modified by PASA NODE_297_length_27700_cov_43.5885 AUGUSTUS gene 6545 10348 . + . ID=g13458;Name=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS mRNA 6545 10348 . + . ID=g13458.t1;Parent=g13458;Name=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 6545 8002 . + . ID=g13458.t1.exon1;Parent=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 6545 8002 . + 0 ID=cds.g13458.t1;Parent=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 8276 9385 . + . ID=g13458.t1.exon2;Parent=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 8276 9385 . + 0 ID=cds.g13458.t1;Parent=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 9584 10348 . + . ID=g13458.t1.exon3;Parent=g13458.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 9584 10348 . + 0 ID=cds.g13458.t1;Parent=g13458.t1 #PROT g13458.t1 g13458 MGRQGGKTAPTVFAGVLFTFLACMYVLVVFFYVRGGSTFTGWDCTPNQVFPLRARYRSLGGGVPNGIGGGLKIFIYPLTRPIFQNALLKTSRERAVAQRSNRTCVCCSTSADGTDVAIYHNLLYSPFITTDAEKADYFFIPTHLSCLLDTDDARSVDAGLDPVPNLKRTSAFLADVLDDIRGAFPYWDRRGGEDHIWAFPHEFGAHLFGDVQKIRRSIFLIANGQYSESVFQPWKDIVVPGLQRTAKPIFMEPSVSRDPPAAFTSRGTLLFWRRPTAVTKERDRGIHQIVYDNLGKYSDVRVEFARGDISDEHLHEPAMRDALFCLCLEGHWAWTSCPFDAIFSGCIPVLVSEDLEYPFERFIDWRAFSVKVSPQRVGNVVQILRRISSDAVATMQTSLQRVWRSFFIPPSYKPRHAIDLIVRELAVRRSMMHPRTAAHRARRREYEEEWGLNGLQMTPQGISSAEALQRGTYWKEQSASDVIAVKTISDSSGCRFDVVANAIMSTRSAMLLFKPSARSSKTITVVMQASVDGIVRHLPRFLSMWQGFVSIAVIVETAENEDRTLMSLVKTSQLVQKWVNFHFVYPQGQKDHDGRSRYPINILRNVAMQQAQTKWVLVLDIETIPSACMRNFLSQVENAEAAFADENVSGDCPGLVAYIPPALQFVSISQASALANAIADDTCSTITKDSAVQALRKGILRPMHLEAPHEHMPIRYNRWMSNSAIYEVPYSAGFAPYYITRRGAPLFNDTFTASDSAHFAQQVHQLFAAGYRFVVMHSVFALRVSNANRRARDINASFFGDAWKAFVLFSAELYGISPAFGALSSNDAARLSNEASAFVNSMKSDGKRQALRTFFGSRQDDNLKYTLIVTTYKLLALREIVAHYCKLPSLLQIVVVWNGFGQPVPGTDVAPLCNVSIHFRTYERNLPSNRYRPRNLPHDAPDPVFMVDEDIIIPLDTIEFAFRVWRSHREQVVGFFPSAALRVWSGSVDTHAFGGEAAVKAGHAYHFIHPNACFIHKKYLDAYWRAPAKMIQQVDATRSCDDLAVNFVVSAETSLPPVYVDGFSGKSFQESPEYLSERSKCINDFIRYYRQNPLIAGDAALRPVGKRPKQ* # ORIGINAL: g13461.t1 original gene structure, not modified by PASA NODE_297_length_27700_cov_43.5885 AUGUSTUS gene 15152 19451 . + . ID=g13461;Name=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS mRNA 15152 19451 . + . ID=g13461.t1;Parent=g13461;Name=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 15152 15277 . + . ID=g13461.t1.exon1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 15152 15277 . + 0 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 15434 15572 . + . ID=g13461.t1.exon2;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 15434 15572 . + 0 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 15737 15845 . + . ID=g13461.t1.exon3;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 15737 15845 . + 2 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 16006 16127 . + . ID=g13461.t1.exon4;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 16006 16127 . + 1 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 16590 16686 . + . ID=g13461.t1.exon5;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 16590 16686 . + 2 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 16821 17242 . + . ID=g13461.t1.exon6;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 16821 17242 . + 1 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 17351 17469 . + . ID=g13461.t1.exon7;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 17351 17469 . + 2 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 17604 17855 . + . ID=g13461.t1.exon8;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 17604 17855 . + 0 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 17969 18114 . + . ID=g13461.t1.exon9;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 17969 18114 . + 0 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 18275 18423 . + . ID=g13461.t1.exon10;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 18275 18423 . + 1 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 18559 18664 . + . ID=g13461.t1.exon11;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 18559 18664 . + 2 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 18793 19024 . + . ID=g13461.t1.exon12;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 18793 19024 . + 1 ID=cds.g13461.t1;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 19158 19451 . + . ID=g13461.t1.exon13;Parent=g13461.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 19158 19451 . + 0 ID=cds.g13461.t1;Parent=g13461.t1 #PROT g13461.t1 g13461 MATDRTLWTLHVEEGRQRWFYASGGVSRPQTTFEKHALGLSTSDDAKALAKPTNAAEAYANGVEFYKLLQTDDGHWAGDYGGPLFLLPGLVISNHVAGIPFLAEQKAEIIHYIKLQQKKEGGWGVHIDHHSTVFGTSLNYVTLRLLGVTRDDPVAVRARQFLHKHGGALGIPSWGKFWLAILNVYGWEGLNPIIPELWLLPSVVPAHPSKLWCHCRQVYLPMGYCYGVRLAATETTIIRELREASDVSTWQAVPCCSAFVLFASVILSAPSRERPHGLSFLASSNQPECPSLKTFLTAGRLQELYVQSYDSIDWLKQRNNVAPVDLYNKHTAFLDLTMAALGLYEQYHIPYLRKWALDVVYEHVCAEDDNTKYIGIGPVSKVINTLVRWHRDGPNSPAVRAHAERMPDYLWMAADGMKMNGTNGSQMWDTGFAVLAILEGGADAAPFADCLQRAYEFLDVTQVKENVPQYNEYYRQMSKGAWPFSTRDCGWIVADCTALGLKAVLQMHSKNFTKRTIPDERLFDTVNVLLDMQNGDGGYATYEKKRGGNWLEYLNPSEVFGDIMIDYTYVECTSSALQGLLLFSERYPHHRTAEISDAIKRALAYVRGVQRPDGSWEGCWGVCFTYGAWFALEALGLTGDRYDRGIPSETVRRGCAFLLSKQMDDGGWAESHESCVKREYVPMDKSQVVNTAWALLALMAVRHDRAPIERGIRLLVSRQLPNGDWAEEGTKGIFNKNCTISYTNYRNVFPIWALARFTRLYGDLGSIPSP* # ORIGINAL: g13464.t1 original gene structure, not modified by PASA NODE_297_length_27700_cov_43.5885 AUGUSTUS gene 23281 23744 . - . ID=g13464;Name=g13464.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS mRNA 23281 23744 . - . ID=g13464.t1;Parent=g13464;Name=g13464.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 23582 23744 . - . ID=g13464.t1.exon1;Parent=g13464.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 23582 23744 . - 0 ID=cds.g13464.t1;Parent=g13464.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 23281 23441 . - . ID=g13464.t1.exon2;Parent=g13464.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 23281 23441 . - 2 ID=cds.g13464.t1;Parent=g13464.t1 #PROT g13464.t1 g13464 MSLTTTETRAILRDTTNVFAANDDVNEVAAIGRLQKEIQDTRDAKEQALKQTIKEWTSKVAKIEGEVEPCEDEATHRVKLENAEHDKFATAKAINHTDKESQYPQQS* # PASA_UPDATE: g13465.t1, single gene model update, valid-1, status:[pasa:asmbl_5343,status:3], valid-1 NODE_297_length_27700_cov_43.5885 . gene 24090 26607 . + . ID=g13465;Name=g13465.t1 NODE_297_length_27700_cov_43.5885 . mRNA 24090 26607 . + . ID=g13465.t1;Parent=g13465;Name=g13465.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 24090 24199 . + . ID=g13465.t1.utr5p1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 24090 24202 . + . ID=g13465.t1.exon1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 24200 24202 . + 0 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 24306 24377 . + . ID=g13465.t1.exon2;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 24306 24377 . + 0 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 24619 24684 . + . ID=g13465.t1.exon3;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 24619 24684 . + 0 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 24867 24906 . + . ID=g13465.t1.exon4;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 24867 24906 . + 0 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 25050 25169 . + . ID=g13465.t1.exon5;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 25050 25169 . + 2 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 25473 25553 . + . ID=g13465.t1.exon6;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 25473 25553 . + 2 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 25712 25773 . + . ID=g13465.t1.exon7;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 25712 25773 . + 2 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 25968 26082 . + . ID=g13465.t1.exon8;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 25968 26082 . + 0 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . exon 26261 26607 . + . ID=g13465.t1.exon9;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . CDS 26261 26301 . + 2 ID=cds.g13465.t1;Parent=g13465.t1 NODE_297_length_27700_cov_43.5885 . three_prime_UTR 26302 26607 . + . ID=g13465.t1.utr3p1;Parent=g13465.t1 #PROT g13465.t1 g13465 MKFRFCGELDCPDWVLAEISILSKMTSIKMKLLCGQVIEDIVGGHIDYDKVFKLTADAKYEASDIKASLAALLFILTSAAKYSVDSESLSNELQQLGLPKEHSGSLCRSYADSLAQLQDTLRKKSLRVNRLAACDWRLDYVLASNTASSVQVPTAQLYVAVETDKLSGPSAASFDVSADKLRLLLSDLKQAHNYMVGLS* # PASA_UPDATE: g13457.t1, single gene model update, valid-1, status:[pasa:asmbl_5340,status:3], valid-1 NODE_297_length_27700_cov_43.5885 . gene 2649 6008 . + . ID=g13457;Name=g13457.t1 NODE_297_length_27700_cov_43.5885 . mRNA 2649 6008 . + . ID=g13457.t1;Parent=g13457;Name=g13457.t1 NODE_297_length_27700_cov_43.5885 . five_prime_UTR 2649 2685 . + . ID=g13457.t1.utr5p1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . exon 2649 5340 . + . ID=g13457.t1.exon1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . CDS 2686 5340 . + 0 ID=cds.g13457.t1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . exon 5471 5527 . + . ID=g13457.t1.exon2;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . CDS 5471 5527 . + 0 ID=cds.g13457.t1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . exon 5627 5746 . + . ID=g13457.t1.exon3;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . CDS 5627 5746 . + 0 ID=cds.g13457.t1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . exon 5873 6008 . + . ID=g13457.t1.exon4;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . CDS 5873 5938 . + 0 ID=cds.g13457.t1;Parent=g13457.t1 NODE_297_length_27700_cov_43.5885 . three_prime_UTR 5939 6008 . + . ID=g13457.t1.utr3p1;Parent=g13457.t1 #PROT g13457.t1 g13457 MPAPSNERAGSKQQGQSGQQSAQPKQEKGEKSGKDAARGGDKPKNAAAAAAAAAVKKNGTTPENNSPTPYDGGTPRSSTPDGAGMEADPIAEQLRREEIGLLLINREELNRRHAGNMGVVPAPPLKTQTVFVRKRRPKDVADSDPGQVGKIKHVTVARRIKSGTRVVKAAASAGADSLQFEKTVRYDLREGHIAQESIDPFSMLGSVNDFELEMRTRGEQRTGSSSPDRMSRVERSGRQSSASRRGGSEDVESATADGAFDKAARQLMDTLKSFDAADKTERRQKMAGMHIYERVDVVRDEHALETYRKQVASWRRQQNRIAGAVGRDPGKLMMNQGEEFRSMLEEKALLDRAITLLEKGSADFWRTSTVVGDELTGILSTLTRTERGEPPELEWLGKPGVVHFELGMEPSSSTSHPWKDSKYLSQRKRQLRKIVESLNPLQPDLRGLEVVGLAPILEELRRINAARIQATHDASLRAGADLDEESNKGESRAPGPHAHHRKGSQPSVKPGPRVSFNASRLAFECMAGMSETRPLVVVNDGTCAIHYSWARVRQECEFGRRTIEDGRQRFYFDANDGIILPGSTKSIPFVFKSERPGIFSETWRLTPSPMVGEALEVTLRGCALEHDTYGGHRAEIEWTLERRQIAIAMRELVESILDGVHGSDIAPSAHDEPCMPEASLIVSRNAELGIHCSGSTLSRLKAVAARAGLKIPSGGDAKSPGVWDYRIKSLHNAAAAIADDTEREEALVELNAVVREASFEPTRPLSDGAHGIGYDLLIQLADAVAETAGALRHKLGLPEKLFSVASEEDAKQLVSQPNDWLKKQGRRQSMANLSRAAVPEPPPAKGAKQPPAAPPGKGTTPTQAQPPAPPAAQQQQPPDAPAGHDDRPQSRVTKKVATRSNGKKDVVATSKTTEVPTPTAEPEKEKAVDRAVTATIYKDQLYNLVHGLVEDTVDKLASLCSELQE* # ORIGINAL: g13466.t1 original gene structure, not modified by PASA NODE_297_length_27700_cov_43.5885 AUGUSTUS gene 26650 27617 . - . ID=g13466;Name=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS mRNA 26650 27617 . - . ID=g13466.t1;Parent=g13466;Name=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 27467 27617 . - . ID=g13466.t1.exon1;Parent=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 27467 27617 . - 0 ID=cds.g13466.t1;Parent=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 27042 27214 . - . ID=g13466.t1.exon2;Parent=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 27042 27214 . - 2 ID=cds.g13466.t1;Parent=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS exon 26650 26838 . - . ID=g13466.t1.exon3;Parent=g13466.t1 NODE_297_length_27700_cov_43.5885 AUGUSTUS CDS 26650 26838 . - 0 ID=cds.g13466.t1;Parent=g13466.t1 #PROT g13466.t1 g13466 LGFNLHFAPFGPSADPTVLDDSHNLVIQVLATRSNTVNFGQKLLVLVNRGNDPVDAIAPDGRRLNSLLKLLRDMFSCPQTAHVLFTNDLKVLIEILLRQLGDLSVGDPLRLDNLEVLRGILLTTGYAESGSHKSAALSQCLNAIVASESEGGDDDAAVRSLARELRERYF* # ORIGINAL: g809.t1 original gene structure, not modified by PASA NODE_3345_length_3678_cov_78.8512 AUGUSTUS gene 1652 2809 . + . ID=g809;Name=g809.t1 NODE_3345_length_3678_cov_78.8512 AUGUSTUS mRNA 1652 2809 . + . ID=g809.t1;Parent=g809;Name=g809.t1 NODE_3345_length_3678_cov_78.8512 AUGUSTUS exon 1652 2809 . + . ID=g809.t1.exon1;Parent=g809.t1 NODE_3345_length_3678_cov_78.8512 AUGUSTUS CDS 1652 2809 . + 0 ID=cds.g809.t1;Parent=g809.t1 #PROT g809.t1 g809 MAGVLSLFSVPIEVVERHLLPYLSNKDRASLAGVNSRLRCVLRHVRLYTLRDAFPQLYWASDAFRNAVCAVIPRERLVLHFNAQTTDLDVSVLSGVHSVDLRNCIRVTDVSALGNVHTLNISGCEDVTDVSELGGVHTLNISGCNGVTDVSALGGVHTLNISSCDGVTDVSALVGVHSLNISNCKGVTDVSALGGVHTLNISGCKRLKNFSALGCVHSLDLSKCAGVTDVSALGGVHSLDLSGCAGVTDVSAFGGVHSLNLFCCDGVRDVSALGGVHSLDLSNCAGVTDVSALGGVHSLDLSNCAGVTDVSALGGVHSLDLSNCAGVTDVSALGGVHSLDLSCCAGVTDVSALGGVHSLNLFCCAGVTDVSALGGVRSLVHTAKL* # ORIGINAL: g5741.t1 original gene structure, not modified by PASA NODE_255_length_29094_cov_41.0321 AUGUSTUS gene 101 14301 . + . ID=g5741;Name=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS mRNA 101 14301 . + . ID=g5741.t1;Parent=g5741;Name=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 101 245 . + . ID=g5741.t1.exon1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 101 245 . + 0 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 379 660 . + . ID=g5741.t1.exon2;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 379 660 . + 2 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 978 1066 . + . ID=g5741.t1.exon3;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 978 1066 . + 2 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 1166 1590 . + . ID=g5741.t1.exon4;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 1166 1590 . + 0 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 1775 1958 . + . ID=g5741.t1.exon5;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 1775 1958 . + 1 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 2192 9936 . + . ID=g5741.t1.exon6;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 2192 9936 . + 0 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 10150 11304 . + . ID=g5741.t1.exon7;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 10150 11304 . + 1 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 11618 11726 . + . ID=g5741.t1.exon8;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 11618 11726 . + 1 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 11944 12009 . + . ID=g5741.t1.exon9;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 11944 12009 . + 0 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 12192 12274 . + . ID=g5741.t1.exon10;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 12192 12274 . + 0 ID=cds.g5741.t1;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 12474 14301 . + . ID=g5741.t1.exon11;Parent=g5741.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 12474 14301 . + 1 ID=cds.g5741.t1;Parent=g5741.t1 #PROT g5741.t1 g5741 DEENDDIVLTDGIRVSELFLDGKTEKNLKTIESLSKDAALESVTVTRNGLLVVCGLADGSVALWSKRDGTVFSIPSPQHGTAPAGAGLFHPSGTAAHVTHRAYASDDGAVVFYIAANNAMYLWTRRDVVGVGASRLAADVSGVWTHLATGGLALPTRDAAEQSVDAVFTYDSARNRSCRVAFVFYRATDLIVTTAQFAFGSVASAHHLMRLSLQPPVPPPSADALSSSHGLVPFSVVWDTVSRPVEGILPEVVSVHEKGGTIARFDPEGVVLAVLLNQHRVRHTAMAWLSVRGRALTAVRVGDYSKIDAGHTDRSYWYVGGEWTSDALFFSAIDGFGRVTVFLRLGGPLVTLVTGAMASFGPSIFCPILPMIEGKMVPSGEDPMRQRFSITCSSAVGRRGEFPRRILASDGFFVIILEIPAQVTYPVVIATLATFKDRIAPLSVDAVRNTPDGQRVLGGPMLRALTAWKLAASHPGGLREAVSMGLSAGRNDRRETTLSVALELVEAAVVGAIPQTQGAAAMACVCIVDSLAYAVVDGMAPALAVRLVGEVICRLLSGDHLVAAGWCADIAETRFGQRLGFLQRLVGRETVTGWSLAAVPDPLMRVSTLLKEERQGQVVIATPSPVPHAHAALLDGVWQSLLDACGPVGLNDTGVPAVEEARAMAAAALERRALLRQPAPSMVTGAGGFQASRTWPLQVDLNASGVSSAGADMSNASMLSALSMNGSLFVPPMAGVSDANALGNRFRGGDAAFFCGSYAPAAKAYLRYTGGDISSPGDLSAGKAAGANAARAMLALLCDGDVEGALLLAARCLRTVKRRRNDGPDCLDSVDELFSSLADAGRARVDVASAEQPMLWVDGTWPRHAIPRRKRKKHAVDIPDMTGGMNGSDEQRQPHPDVNANAERRSSLASFGMRTTPPQSPASTGRTAAKPRANDSTGDAEEDYIAVASRLAAVRMIGLFLASHFAGGDVDVFRCALAACEPSTATLFFWSVRDSDESGEEVRGRGATPRRKDGLPHLPAATLLPITSGSFVLSRTALSRHNSIGDTLSPRVAVDLLLLSGLALHAAEFCDTVGDWRAAYVIAASHAHVIGPSVAVDILRRKVSGFASADSTNYYPGLQAQAHVTTTHHNVRHADATVKVAPTLSVGMGTAPVEGNAASLLDIFRGAAFGVGGAIFCEAMQLCGRELRSLCASSSPIVHASFLLPFPPPYCPQPRQRRGSKQKEGRPGEWADDDGVGHVRMFETHRRELRDIREQRSADVDRDSVPRKGEGVDGRDYSSAVERGFRNAIHRCVSRVCLLLNSLRYMRVCTSLYVRRLQKKSADVPEALIASAATYNIGPGSAIGDDVRAAYHCFRVLCRTSWMVHVRDKVALLLRKHEELVAQRDRRGHANAGARGQMSQAVGGGLASIATDTAMEGIVQSAVSILPWIERLLCFADLLPLEHMQDLLITCAAEAALARGHSRRAALDALLRAFPVPEEDAMPSVRAKLARLLRRLRLEDADLVGSRYADTSFEESVLQRTTDLEDSAVGDTSRWLEEDAAATRSLSQLPRGFDKWKFEGDSEYSVFLETMLLIVMAGGKGQSEASKKPVFSASEPIQKSGGGGVGARAVGSRGGSAGGSVSVERLVRLSQWAESAKGDASHVMRAASGLQSASMLARDGSGGVGGPVGGELGLSMSRGSGVARMSPQVGIPALSADTVATMRVGVSMRVIVDALHALGAPPSSPDAPRVASPSKRGARVTVQTGTDVEMPGMGRPPRRRGQPQSKQQQQQQQQQQELPLLIPSRAIDGKDASGIYLLQATQSQAQRDTAGGDGEDDLFDVTTTTSTDVTSRGGDHVTDSRGSPLEDGVVVDDVRGLSGQSRRGRGSREVSLLVDGQDGAKRGSEEYLAPDGLLRVTSRERRGSIPSRRSSSASDGRLLPAPGVSTSGGEGGVLTAISDLDHDDDDGMGTMDATTLNPLTELTALSMSMSSSGHALMQTGGSMRLLQTGDSLGGHAQLEEHDDNYSDDGTARTSRPGSRGIATLSLTADGPSVTRGKGSARSSGVRRTASAVPLFDAVRPSTAPSLITQSTPVRSMRRPASASALRSRDVHRSQSETALPRVTFDGDTDEGDAADDERELDRTVDLSLATDPFTASAPMYDISAISSSARDELPHHVGAPTDARDILIVSSHGAHMTSRQRKPQQQQQQQQQQQQQQYHGDANEDDPRSWSRGRTGHPRGSVGVGVGVSAPSATATATDVFNMVASAGFQTFSSAVAAQTAAHLMAMGANLFLESVRRRTGALESSGSSASFVSSADDRSYGEAVGKHRVPRHLRDAAAPLRDARDMFTRDDEGRGGHRRWRRRRSSRRDKGRRRRSSGGSRSASESLSEDGSSWESWTRSKIDEEEEEKEGDNDDKGGKGISTDEDLLATETHTDTDKSKRLRGRNAGVKTHSPTGSRDGAAVLSASDGHEDVSDDDSNASQKSAAMSESELVDMWGEDDDGNGEGDGENVLLNTDELIKSSTASGISDKALDAAGDNNEKEVGRSVKGGGEGDEENSLAPPAVDRARKHGGEKPVRRRDKGSSSRHRASTSSRRSSRQSKGEQSRKRRSRRRDTHDASDDSNDSDGRYDSDGRYDRRGHSRRRERRSVRGRDNASQRLESGGGLSGSAQRKQEADDIRRGDDEERGPAIDIEHFRASLLVSRAQAARGAAPAADDPGLSLLRSRGGVINAKMAPSSFLLRMPEHVPIEPLKEGPAVLLTSGAGGEMRRVWPLANTLGKAPPPDDYRAAVAFGAGDQPRLRLFDGKGDGSKAPHPSFLLGLGHNGQPAGAFRFVFPHLGQQDNADKGNVRRGGPGEYVHALAAMERARPHIVGDGIGGTSDVNKRPPSLALPSDDAGVRFKLVPLPPQRRDTSKGDILLDRPQQKPVFGSLLLRIDTAKLNDLEKPVNPALILVPSAAPLSGLPAAPSQRKVPNVRARERRRRHLSTDPNGDCDTKQPENSSPTAFSESTTPEKGATPEKDSTAVAAAKSGAAPIVKSVGIGSSAALRDAKVGADDAISRDVGVSPVGSVEFARTQRRFLVDAAVDATVAASSVAGGRRREDAEVDERLARLEAMVLDASRGSRGSRAGAASTRAMEPPLSHERKARGHRVEQSSRHPAVTRRSSGDDSGSEGVSRDENASQEEYSPAEYADEHAARDRRSTAAAVAARDRRKVAAVTRVIPPDVFCRIAFNALEGSTYAHAPKSLAEHPGRAYVNIVDLDVSGHVGGRPSEAVWEDEMVPPQRPRLERRAARTNGAPTHVTDAQRDEEVAGGGRDVGRIRDGVKTAGESQSQGPADEHVTGGRMEMYGEVDDAAVDARMRELFPESLDRPDTKAHNVSDARITARDRFMRDINAMKAQLDAVEETARVIESEFSGSRKIMRTIEQLHDVDPDVVRKAAVLDKIRQSSNTNMSTMTIDDRGRTEAPDQRPRISIPAPLPADSANDTAVTQQPNTRHSAVTEGRPASSIDRTHPRSPTRPQHASTSPTRQSRESPHIRRLDDAMSHGYADDLGSPASPARGGLVDRWASSPSPPPAAKSAMQPKASESSASRDRVAAKKGPKGPVASGVLGVAARAPPSSRPPRPNTTARQRAKEGGVSRAAATQPPAVMPKTDALAVFKAMFRDDASDAPAHLRAPGGHVRSKEELRRFMSERHAERASERRLQRSQLREKEAKPYDVRRSEIARQREREAAAKDQRTQEKAVRAQAESIARAAVRRRAEADAANAKARAKGTGSVRARGTPGSRGQEGGRLALAPKDASGGDNYTRDPVRELAFAIAKEYRQKGMDGIRASRDGGFGLRVASEAGGRSSGAESDGENARAVPRAVHPGSASYTIARPATHAPTPSTDGGTKRGMAKRRFGGVDERTINERVDRATALLQEMVESADSVRSRVMQSSPGANNRYGGLSGRGPGGQHGGALSSTPRARDHARGSSSAGVAGKLMHTGGLTYRGGGNDGGLYGDLDGSITAGDFGGRIGDVSGDISGRQASSKSMSSGATDGTVDWDAVDAILAEDD* # PASA_UPDATE: g5742.t1, single gene model update, valid-1, status:[pasa:asmbl_4554,status:12],[pasa:asmbl_4555,status:12], valid-1 NODE_255_length_29094_cov_41.0321 . gene 14664 24644 . - . ID=g5742;Name=g5742.t1 NODE_255_length_29094_cov_41.0321 . mRNA 14664 24644 . - . ID=g5742.t1;Parent=g5742;Name=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 24439 24644 . - . ID=g5742.t1.exon1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 24439 24644 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 23995 24114 . - . ID=g5742.t1.exon2;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 23995 24114 . - 1 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 23732 23860 . - . ID=g5742.t1.exon3;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 23732 23860 . - 1 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 23226 23394 . - . ID=g5742.t1.exon4;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 23226 23394 . - 1 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 22931 23038 . - . ID=g5742.t1.exon5;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 22931 23038 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 22551 22703 . - . ID=g5742.t1.exon6;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 22551 22703 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 22134 22269 . - . ID=g5742.t1.exon7;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 22134 22269 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 21459 21931 . - . ID=g5742.t1.exon8;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 21459 21931 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 20848 21163 . - . ID=g5742.t1.exon9;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 20848 21163 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 20551 20622 . - . ID=g5742.t1.exon10;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 20551 20622 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 20135 20217 . - . ID=g5742.t1.exon11;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 20135 20217 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 19754 19849 . - . ID=g5742.t1.exon12;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 19754 19849 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 19393 19519 . - . ID=g5742.t1.exon13;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 19393 19519 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 19154 19256 . - . ID=g5742.t1.exon14;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 19154 19256 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 18593 18748 . - . ID=g5742.t1.exon15;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 18593 18748 . - 1 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 18140 18227 . - . ID=g5742.t1.exon16;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 18140 18227 . - 1 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 17557 17904 . - . ID=g5742.t1.exon17;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 17557 17904 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 16896 17397 . - . ID=g5742.t1.exon18;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 16896 17397 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 16438 16640 . - . ID=g5742.t1.exon19;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 16438 16640 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 16091 16177 . - . ID=g5742.t1.exon20;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 16091 16177 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 15470 15739 . - . ID=g5742.t1.exon21;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 15470 15739 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 15207 15321 . - . ID=g5742.t1.exon22;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 15207 15321 . - 0 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . exon 14664 14998 . - . ID=g5742.t1.exon23;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . CDS 14865 14998 . - 2 ID=cds.g5742.t1;Parent=g5742.t1 NODE_255_length_29094_cov_41.0321 . three_prime_UTR 14664 14864 . - . ID=g5742.t1.utr3p1;Parent=g5742.t1 #PROT g5742.t1 g5742 MRLAEVERTSIISWSPNGVAGQPLLAVGTAAQQLDATFSTNAELEIFSFDKSAGENGLVRTGVIPANFRFHSLTWGAKGVDSGEMPQGVIAGGMDGGVINVWNVASVLQGAGEHSLVARMEVHHGAVRTLDFNPYQGNLLASGASDSEIYIWDLNNPQKPMTPGSRPQQTADVACIQWNRQVQHILASTSMGTGTTVWDLRANRPVLQINDPSFRFRSRAFAWHPDVATQVAIASEEDRAPIIQVWDLRNAYSPMKSLERHSRGILSVAWCQRDSDLLISSGKDNRTLVWNPNSAAPGGDVVAELPPSANWNFDVQWCVRDPSLMATASFEGKVAVHSLTDVPSVDAHAAAGDQFFSQSTPKEAVLRNAPKWLRRPVSAAFGFGGRIASVTPNTQALAAQQQQQQQQGQPGQPAPQPVTALTSVIHLRTVETELDVVERARLLKNALDRRQYLEYCTERANETIDGTSEKDTWEFLRAGFEKEPRRALLALLGYDTEEVVARVSEAVGLVDGVSDAVEALAVTNDNVFANSPIMGASANGLGSYATQRSVDTPSSPGLNSSSPHDFGAHSASGSLNPFMSNGNVPIPFGVGVAADGGMDSSFDASANVPFISVSKADAAPFAIETGSDIDGLVSQALLVGNFDAAVNACVSADRMADALILAMAGGPELVARTQAIYFKRNKSNLSRLTNAVVTRNWRDIVDSADIANWRETLALLCTYARTDEFASLCGALAERIDRESADGTTTALLVYICAGDVERVVDCWIRIYGDSTDSGSIQTLIEKIAVLKQSVVEAGGSQATTSGSTTAHALLAHKYRQYAEVLASQGHLATAMEYLTRAGVTDVTQGALAEFLDRLYAASGADKTGLPRPVFPFERIDVQATPTPQQPQQPPQQPQQAQYGQANAYGQYGQPAQGAYGVTAGVGAYGQPQQSQYGAYGQQQQPPAQSGYGAQQTYGQMPTAQNFWDTPQQPAHATSTQPYGPTPTNVAAAASSYAPPPTQPSYGQPAAYAAPTSSAAPPSQYGAPLSAGAYGQQQQSSQSPYGQPQQSSQSPYGQPPQSSQSPYGQPQQYGQASAYAPPVASPAKPLGPPPTAGFMPSAAVSSPAPAAQPAAAPSMSQTAFYLAAAAPPAPVISTAPTAAPGPQSFAQPAYGQQYGGPAPPAAGPAASEPPRKESLGVSTADKRWNDPPPIKFEQPRPAASGPLPVTTPMPVTQPLAMGPGGQYGAPQMVPIGAQGPVVNQMGNQMGYGVSPQSMQQQQHQQQQQQQQQQQLQQQQQQQAPAPLPPPEPEKPIPQEYLPIVQMLDQAFDRIKPNNPTLKKRMEDVRKRLNNLNDAFRNRSLPENIVSALATLAQGLLNNDLQLATNVHSYLASTGNIDMIGYWMVGIKNLIQISRNPM* # ORIGINAL: g5743.t1 original gene structure, not modified by PASA NODE_255_length_29094_cov_41.0321 AUGUSTUS gene 27128 28946 . - . ID=g5743;Name=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS mRNA 27128 28946 . - . ID=g5743.t1;Parent=g5743;Name=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 28323 28946 . - . ID=g5743.t1.exon1;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 28323 28946 . - 0 ID=cds.g5743.t1;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 28199 28226 . - . ID=g5743.t1.exon2;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 28199 28226 . - 0 ID=cds.g5743.t1;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 28000 28082 . - . ID=g5743.t1.exon3;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 28000 28082 . - 2 ID=cds.g5743.t1;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 27687 27878 . - . ID=g5743.t1.exon4;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 27687 27878 . - 0 ID=cds.g5743.t1;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS exon 27128 27520 . - . ID=g5743.t1.exon5;Parent=g5743.t1 NODE_255_length_29094_cov_41.0321 AUGUSTUS CDS 27128 27520 . - 0 ID=cds.g5743.t1;Parent=g5743.t1 #PROT g5743.t1 g5743 MTTIFHEKLANITLNNGDGVVRFSKWCDRIAAAGKKLLSFCKIDGERCDFDPLNRDVPSSYASHLSQTPGATASATKTSTTSATKTSRSATTAITTWTSNAKGSRAQGGCHKDPTSSGERKSERKGNTTGKDASGGRAPKKTPLPQQDELGVNGNQNCLAVGLASTSSDSGITACNSSPTGALDTKRLFMACVRAAGVAGYPSREVYKSSTTRAWFVRGGDGRKYGLVLDWLDAETPTAKATPIMGLCFLRDSLEALLCLHSAGYVHRDVKTGCMLFDWGLVRWRLVDFDLVGRMDANGTARGGGIGTRNRLSLDPLRRQCPFNWTLQGFIAPETLHDGRCSAASDLYGLGVAAHEMYMKACRLVRDETDEWRVFLSVVFQLRSGNPKERGTVAGVLQTVRGELHRLCGDCDTPSLPEWMRVNAASRRKMHLQRRGRCV* # ORIGINAL: g6345.t1 original gene structure, not modified by PASA NODE_4373_length_1719_cov_26.924 AUGUSTUS gene 92 1050 . + . ID=g6345;Name=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS mRNA 92 1050 . + . ID=g6345.t1;Parent=g6345;Name=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS exon 92 325 . + . ID=g6345.t1.exon1;Parent=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS CDS 92 325 . + 0 ID=cds.g6345.t1;Parent=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS exon 501 623 . + . ID=g6345.t1.exon2;Parent=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS CDS 501 623 . + 0 ID=cds.g6345.t1;Parent=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS exon 898 1050 . + . ID=g6345.t1.exon3;Parent=g6345.t1 NODE_4373_length_1719_cov_26.924 AUGUSTUS CDS 898 1050 . + 0 ID=cds.g6345.t1;Parent=g6345.t1 #PROT g6345.t1 g6345 MRWLGPASLLANVLLSFGLIIVLIVSIVQIQDKVVAPVSIDNYVVWSSLPIMFGMTVYSIEGIGVVIPCETAMKEPQKFPKVLTGCICVAAVLYMLFGAVPYVAFGVDVSDNLTESLDTFVDASSNPSLWRALIVATRISFIIAIFLSFPIQLFVVSDLCEEVCARHDS* # ORIGINAL: g13411.t1 original gene structure, not modified by PASA NODE_4635_length_1385_cov_63.0107 AUGUSTUS gene 667 1173 . + . ID=g13411;Name=g13411.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS mRNA 667 1173 . + . ID=g13411.t1;Parent=g13411;Name=g13411.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS exon 667 1173 . + . ID=g13411.t1.exon1;Parent=g13411.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS CDS 667 1173 . + 0 ID=cds.g13411.t1;Parent=g13411.t1 #PROT g13411.t1 g13411 MKVFHDAATASGTATPLPDSATSGTLASPEGEQASPPATAEAPERTVRPAGTAAFTTWLWAHPWVASTSHDDVTQTRAALSTQAGRDFTYNLGSPLRGWMAYCGSVGRDTTTSPSCTEMDDWLAREAGAVSTKAQRRYSLRRAFRFAHEPSFRQECVRRLLDGAPVRE* # ORIGINAL: g13410.t1 original gene structure, not modified by PASA NODE_4635_length_1385_cov_63.0107 AUGUSTUS gene 4 552 . + . ID=g13410;Name=g13410.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS mRNA 4 552 . + . ID=g13410.t1;Parent=g13410;Name=g13410.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS exon 4 552 . + . ID=g13410.t1.exon1;Parent=g13410.t1 NODE_4635_length_1385_cov_63.0107 AUGUSTUS CDS 4 552 . + 0 ID=cds.g13410.t1;Parent=g13410.t1 #PROT g13410.t1 g13410 MTTKAAEDVVLIMTAYVLPWGIPAWIQHDAGSEFENEIFDTFCRAYAIERHATSVDRPQANGQAERVFSTATDWLSKELTQSKTERWECAVAKVANSYNGSINSTTGKTPFELLRGKLPQLPVDRQIGWKPVVRFVDEDELRTRLTAAQEVQRSVADKRVTTTGVHAFAVGDMVMVHVRSGE* # ORIGINAL: g6330.t1 original gene structure, not modified by PASA NODE_857_length_16672_cov_50.919 AUGUSTUS gene 10436 16519 . + . ID=g6330;Name=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS mRNA 10436 16519 . + . ID=g6330.t1;Parent=g6330;Name=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 10436 10510 . + . ID=g6330.t1.exon1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 10436 10510 . + 0 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 10730 10799 . + . ID=g6330.t1.exon2;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 10730 10799 . + 0 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 10938 11078 . + . ID=g6330.t1.exon3;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 10938 11078 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 11941 11976 . + . ID=g6330.t1.exon4;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 11941 11976 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 12535 12642 . + . ID=g6330.t1.exon5;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 12535 12642 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 12843 12936 . + . ID=g6330.t1.exon6;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 12843 12936 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 13159 13304 . + . ID=g6330.t1.exon7;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 13159 13304 . + 1 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 13667 13962 . + . ID=g6330.t1.exon8;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 13667 13962 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 14456 14575 . + . ID=g6330.t1.exon9;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 14456 14575 . + 0 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 14784 15129 . + . ID=g6330.t1.exon10;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 14784 15129 . + 0 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 15287 15464 . + . ID=g6330.t1.exon11;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 15287 15464 . + 2 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 15775 15982 . + . ID=g6330.t1.exon12;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 15775 15982 . + 1 ID=cds.g6330.t1;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 16343 16519 . + . ID=g6330.t1.exon13;Parent=g6330.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 16343 16519 . + 0 ID=cds.g6330.t1;Parent=g6330.t1 #PROT g6330.t1 g6330 MQIAPIARTVDVATLVAVETGFVWWCPSNFAGNLCDKCAPGFGGPTCTECPKCNDQGGRCNEGIENDGKCACRTAGFTGTLCDSCAAGYYGVRCEQCVAGRFGENCTACPPCDAIGASGSCNDTMSGNGKCVCKKGFKAALCDECGAGRFGSQCALCPVCGNGDCDTGRDGTGICTCRDGYAGANCDQCERGRFGFLCDSCPACLNGGACDEGIRDTGTCLCPVNYVGDLCEKCAKGYFGPDCRQCKQCDADGGVCLDGLAGDGTCSCNVGFRHTNASSLKICDDCDGNNRWGKLCIPCPDCGQHGTCFAGRLANGTCACDKGWSGPLCDECASNFYGRTCIECPPCKAGTTCTQGLFGDGQCSSSDPATSASAGSSGSPIAAVGGAIGGCFALFAVIAVAYYYRARIAKTMRSRGWKLRGGVNGSHDALAGSGDLDIENASYERAHGMKTLSTISNINEGDDGMDIYTEIDETNLIDEIPRDQIRLGDKIGSGNFGDVWRGMLDPMGIVTAVKSLKDGATAEQNKLFIMEAKLMAELRHPNIVRIIGMVTHGKPPLLVLEFMSNGSLLSYLESKAEDLSRKTLMCMCRDVAAGMVELSRRGLVHRDLAARNILVDSDGTCKIADFGLARHLDSDYYISSWVMFLSLTQAVAVLNLQFSLSCLI* # ORIGINAL: g6329.t1 original gene structure, not modified by PASA NODE_857_length_16672_cov_50.919 AUGUSTUS gene 1152 3692 . + . ID=g6329;Name=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS mRNA 1152 3692 . + . ID=g6329.t1;Parent=g6329;Name=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 1152 1187 . + . ID=g6329.t1.exon1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 1152 1187 . + 0 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 1329 1398 . + . ID=g6329.t1.exon2;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 1329 1398 . + 0 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 1684 1824 . + . ID=g6329.t1.exon3;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 1684 1824 . + 2 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 2178 2242 . + . ID=g6329.t1.exon4;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 2178 2242 . + 2 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 2452 2485 . + . ID=g6329.t1.exon5;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 2452 2485 . + 0 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 2808 2843 . + . ID=g6329.t1.exon6;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 2808 2843 . + 2 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 3151 3285 . + . ID=g6329.t1.exon7;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 3151 3285 . + 2 ID=cds.g6329.t1;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS exon 3547 3692 . + . ID=g6329.t1.exon8;Parent=g6329.t1 NODE_857_length_16672_cov_50.919 AUGUSTUS CDS 3547 3692 . + 2 ID=cds.g6329.t1;Parent=g6329.t1 #PROT g6329.t1 g6329 MEARAIPAVQDRCPWNFIGALCDQCPPGFGGATCTACPACDPIGGKCNEGITNDGKCSCRSMAYMGDLCNQCKTGFYGVTCAACWSCGTQGMCVDGIKGTGLCKCNEGFTGVACGECDGLRYGPSCTVCPACQNGGICDRGLTASGACLCKPGFTGALCDQCLPGFYGPNCLACGACDALGGKCADGIANSGACVCNTGYSSATCSECVALRFGTSCLGE* # PASA_UPDATE: g7609.t1, single gene model update, valid-1, status:[pasa:asmbl_5911,status:12], valid-1 NODE_3349_length_3673_cov_32.9725 . gene 683 3487 . + . ID=g7609;Name=g7609.t1 NODE_3349_length_3673_cov_32.9725 . mRNA 683 3487 . + . ID=g7609.t1;Parent=g7609;Name=g7609.t1 NODE_3349_length_3673_cov_32.9725 . exon 683 1166 . + . ID=g7609.t1.exon1;Parent=g7609.t1 NODE_3349_length_3673_cov_32.9725 . CDS 683 1166 . + 0 ID=cds.g7609.t1;Parent=g7609.t1 NODE_3349_length_3673_cov_32.9725 . exon 1461 2889 . + . ID=g7609.t1.exon2;Parent=g7609.t1 NODE_3349_length_3673_cov_32.9725 . CDS 1461 2889 . + 2 ID=cds.g7609.t1;Parent=g7609.t1 NODE_3349_length_3673_cov_32.9725 . exon 3298 3487 . + . ID=g7609.t1.exon3;Parent=g7609.t1 NODE_3349_length_3673_cov_32.9725 . CDS 3298 3487 . + 1 ID=cds.g7609.t1;Parent=g7609.t1;3_prime_partial=true #PROT g7609.t1 g7609 MPATPVVARGGRGGPPVEWSLRERVLLAQAVRKSGDNNWVSVSRAIKAHLEGHQHHRGATHGHDDIYSQKNCALQYAHLLESAGTHKRKRADGVPGEPVVIVVARKLQQEYIEELKKSIVDDGNAHAKLARELVEIESGAWDDRIDAVWEELSRASEVPDATVDSAVPVPMDVDSAVDAAMAHNFVSAAGNTAGGPSHSGADATAADQIAAPVIAQAHEQQQQQQQQQQQQQQTQPTSLSLSAQQSQTVTPPAIQTPVQTQPPVQTTTMSSVPPTHSTPSVAIPANVQLRQTQPQSLPPQSPAPQRPPTAAHTPATQQPSVAPPQQQQQYSPAPSPLQQQQPKTPMQTQAPQQAQTQPTVARVQPPSTPVHATTPAQTQPHAQPTPQQTQQTQQTQQTPQQRQPPSTPSDAQRGSVQLGGKQNGAPFVADPTANVSVARVPTTASPAFGAGKAPATIAAPQAHVTSNVHQQSPHVHVQPQQRQPTLSAQTQDDASTQAAALEAAARKKGKAPQQQQQQPTQPPPQQQQQQQQQQQQQQQHPSAAAAAAATHISAKDSPSARVPGRRDVTPAPPSLPPAATAPSALLESAPSSAPETPLLSRTSANTSALATSTPTGAMAGIADAVRTPDASARATHEGEASVDGSPVATVAWKKAMMIVWRNIANHKYASVFMKPVSDESYLEVIRKPTDLVAIKRRLEEG # PASA_UPDATE: g1022.t1, single gene model update, valid-1, status:[pasa:asmbl_9688,status:12], valid-1 NODE_852_length_16792_cov_42.8047 . gene 12461 16574 . - . ID=g1022;Name=g1022.t1 NODE_852_length_16792_cov_42.8047 . mRNA 12461 16574 . - . ID=g1022.t1;Parent=g1022;Name=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 16432 16574 . - . ID=g1022.t1.exon1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 16432 16574 . - 0 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 16093 16229 . - . ID=g1022.t1.exon2;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 16093 16229 . - 1 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 15663 15796 . - . ID=g1022.t1.exon3;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 15663 15796 . - 2 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 15251 15430 . - . ID=g1022.t1.exon4;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 15251 15430 . - 0 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 14746 15041 . - . ID=g1022.t1.exon5;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 14746 15041 . - 0 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 14406 14558 . - . ID=g1022.t1.exon6;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 14406 14558 . - 1 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 13792 14251 . - . ID=g1022.t1.exon7;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 13792 14251 . - 1 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 13469 13561 . - . ID=g1022.t1.exon8;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 13469 13561 . - 0 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 13100 13142 . - . ID=g1022.t1.exon9;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 13100 13142 . - 0 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . exon 12461 12933 . - . ID=g1022.t1.exon10;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . CDS 12728 12933 . - 2 ID=cds.g1022.t1;Parent=g1022.t1 NODE_852_length_16792_cov_42.8047 . three_prime_UTR 12461 12727 . - . ID=g1022.t1.utr3p1;Parent=g1022.t1 #PROT g1022.t1 g1022 MIWRYLLEPPCNSEAFSALVGRGVYSVYRSIERDFPMRGARYTRLLQRNLSALAHWSPAFAASHEFLPSLIFPFVKVFPDQPLICFEIIATVIVNWCQYWFEYAPNPPLRVMHSCEILLSHVDPELHAHFVAQQVTAEVWAWQLLRTLFSEVLSQDEWLRLFDHVVAMHPSFIYFVLIAYLRHSRNTLLRQSDRGEFVDIFTRGLPVSIGAVIKEARELYASVPKHVHPGVQLETLPDADRHLAGDDGRARARVEPFVPLAKGQYPVLKNHPQPQIDFYLRERECIAQDEENITREREALREISAELDRIRQNEDTWRRQKESAVEGRRELDALAAEHRRILDEKERRMHVIERENHQKELGIVHTVRQRLAQDAVNSQHERRDSINRLMASDYDAKRRQREIDEERMAWRAETSKAHADMGTDHSRLVASRDVHYASGVGGVGGDEKDISPLAPGEQFWARQDFLRSKCASDSPTSIFVGGLGPRVSIAPQKELPSAWSAFAEREIKRRHSPGKWVSADSSEERMGGSYDPRMATVSSSGLGSNDERQSTGQSEAWAHRVHVMGRPAGQSGSGQYHARASGAHAGDAGGRDNSSSRPSSRGSDRSRISFQSGQ* # ORIGINAL: g1019.t1 original gene structure, not modified by PASA NODE_852_length_16792_cov_42.8047 AUGUSTUS gene 6236 7988 . + . ID=g1019;Name=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS mRNA 6236 7988 . + . ID=g1019.t1;Parent=g1019;Name=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 6236 6322 . + . ID=g1019.t1.exon1;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 6236 6322 . + 0 ID=cds.g1019.t1;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 6438 6554 . + . ID=g1019.t1.exon2;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 6438 6554 . + 0 ID=cds.g1019.t1;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 6782 6844 . + . ID=g1019.t1.exon3;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 6782 6844 . + 0 ID=cds.g1019.t1;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 7089 7257 . + . ID=g1019.t1.exon4;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 7089 7257 . + 0 ID=cds.g1019.t1;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 7411 7988 . + . ID=g1019.t1.exon5;Parent=g1019.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 7411 7988 . + 2 ID=cds.g1019.t1;Parent=g1019.t1 #PROT g1019.t1 g1019 MLSRSAAAVQKIPRLILGLTGGRERLLSRNVLARSHARWDPTQPKWEKVALTATGNGMKVTAMTVQQEHRKQMPACSGITQFSSETQHKIATDESHAFGGNDEAASPLHVLLSSLVSCENATARILMMGREMQMDAIDFHAEAEMEIPDRTKDHNARTRFRRIVVNLDVKTPEDEKAINTLASYVRQKCPVTALFADAGIVVQTNWKITPTERRQVQKMVQPTHEIQRVRRDHKEHEPLQRNDTVNDSGPEVSSTLSSGLGEGLPNRPCDAQTNDGREDAPRGSKRKQNMPIDRDEGARAVDDVQRSRETPIEPNHGGVPFGSAGRTTIRPQEQGGG* # ORIGINAL: g1018.t1 original gene structure, not modified by PASA NODE_852_length_16792_cov_42.8047 AUGUSTUS gene 2150 5312 . + . ID=g1018;Name=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS mRNA 2150 5312 . + . ID=g1018.t1;Parent=g1018;Name=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 2150 3739 . + . ID=g1018.t1.exon1;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 2150 3739 . + 0 ID=cds.g1018.t1;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 3859 4942 . + . ID=g1018.t1.exon2;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 3859 4942 . + 0 ID=cds.g1018.t1;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 5077 5174 . + . ID=g1018.t1.exon3;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 5077 5174 . + 2 ID=cds.g1018.t1;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 5262 5312 . + . ID=g1018.t1.exon4;Parent=g1018.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 5262 5312 . + 0 ID=cds.g1018.t1;Parent=g1018.t1 #PROT g1018.t1 g1018 MASRIPASVLSGHERSVISATFSADGRSVWSASVDGTLRCSDAYNGRCICVTRYAASPGRDVALNGSIRQVAAISSDGFLVAYGTGDRCINVADARTGEIKATFNGHTDVVTAVAFSRDGHYVASGSHDNTARVWHARSGVCRFVFHGHSAPVTAVAFSRDGSMIASAFDKRVHLWNGLTGDNIRSFSGQHTGGLIICLAFSPNCHTLAAGGSAVQLWNVDQGTSLTTSGYAGLRVHAVAFSPDGCTFATAGNDKGVHLWETSTCKCKLSLLGQAYVPVTLAFSPNARTILAGCDDGKVRIWDVADVTRVTALEAMASVPRGPRISPTITAAHGPQKRANASVTKTPLLGQPPGPSPRTVPPTYAQAARATSLTKGTTASAPSTGAAPVTRTPATAMPSQKSPASASVASAPVAAAVSVCTPVSVAPPQPPRDVTTPKEQSHDTTPQVRDTIAVGPPQQPTAAESPLAVPGSTPAGTQIAGLSSWGKALESQKRPREEDSFTFQRNSRAVRPRTETERNLADGANSTPSEITVGAAHANAIAAVSNVLAKMPEMSRDTAVKVVRAPEAAAAAQRPAYADGDRGNRRITELEQTVAALKASAVRGAAALEEKQRRIAVLEKNVAALTAQRMSIEEEKNRLSSELDKAVASVDAKLVAGAEERKRRIAELESTVSAQATREKTALDEKNRRIIDLERSLASLDAQRLAEEGEKNSRIAELEAAVRAQRTRGVAYMDEKPSSKRELEEAVAALNARTAELDGMRSCVAELEAKRAQGVAAVAEKHVRILELEGSIASITAQRLSDMESMNNRISELEATVDAKTRRIVELETTVVALNERNAADLDENARRIAELEEAVAAAGVASDTGVARPPKKYADLQLMCDRLQGKPSALLGLSAQALLELSHSITQHKVAVEAAHAAAIKDTTDFGSLYFMFFIPKDR* # ORIGINAL: g1017.t1 original gene structure, not modified by PASA NODE_852_length_16792_cov_42.8047 AUGUSTUS gene 244 1461 . - . ID=g1017;Name=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS mRNA 244 1461 . - . ID=g1017.t1;Parent=g1017;Name=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 1359 1461 . - . ID=g1017.t1.exon1;Parent=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 1359 1461 . - 0 ID=cds.g1017.t1;Parent=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 750 1253 . - . ID=g1017.t1.exon2;Parent=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 750 1253 . - 2 ID=cds.g1017.t1;Parent=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 244 573 . - . ID=g1017.t1.exon3;Parent=g1017.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 244 573 . - 2 ID=cds.g1017.t1;Parent=g1017.t1 #PROT g1017.t1 g1017 MSRIELSRPPMMACAVFAILLALSSLVSAVVVSDATDTLVVLLSDDPNTNTVKKMLPGSSFSAKYPNVTVAFYDQLTRDSTDLATTVKGLVEKKSSAVDVFALDVIWPGDFAEHMVDFRAYGGENFTTGMFKNMVTNDVVNNRLVAIPWYADVGLLYYRKDLLNKYGYSRPPQTWAELQAMSERILDGEQRPGLWGFVSQMAEYEGLTCNIMEWLFAWSGGNAVETDGTITISNANSARALQFFIDGLGRWIPPQALNMREDDCKNMWLAGNTVFVRHWPGNIGDTERANVTFAWGVTNLPGQTAKRTAGAL # ORIGINAL: g1021.t1 original gene structure, not modified by PASA NODE_852_length_16792_cov_42.8047 AUGUSTUS gene 10348 11655 . + . ID=g1021;Name=g1021.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS mRNA 10348 11655 . + . ID=g1021.t1;Parent=g1021;Name=g1021.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 10348 10571 . + . ID=g1021.t1.exon1;Parent=g1021.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 10348 10571 . + 0 ID=cds.g1021.t1;Parent=g1021.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 10758 11655 . + . ID=g1021.t1.exon2;Parent=g1021.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 10758 11655 . + 1 ID=cds.g1021.t1;Parent=g1021.t1 #PROT g1021.t1 g1021 MVRKIDVDRRKNGLTRDEFDAEYLRPGIPVLIEGGVSHWPAARLWNLDYLTEAVGDTDAFVRKNTSSDDYKIGRRYLVEKMKFSQYASWLKTDNPIAKDYYLAVQNLKQAYPQIASDISLPQYVGKLHGGPYMWIASAGHYEYTHIDPDDNFLAIITGHKRVRMFAPRDFHRLYPNPLGSKGRTIQAQVDLDNPNTTRFPDYDSAECYECDVGPGDLLYIPAFYWHQVTTVVQTISVNMFFGDAGTHDYIAKCVRQPRWTPFSYWLSNVIEQNRPLDSFATICADLRRALSQFIFKQYHEQPTDEEIDILVALVKERCGEDEAWMRGIELAPAVQQRKHPPQLKIRGLLWRDSSAKESNSDDDSQQPLAREKA* # ORIGINAL: g1020.t1 original gene structure, not modified by PASA NODE_852_length_16792_cov_42.8047 AUGUSTUS gene 8459 9988 . - . ID=g1020;Name=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS mRNA 8459 9988 . - . ID=g1020.t1;Parent=g1020;Name=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 9781 9988 . - . ID=g1020.t1.exon1;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 9781 9988 . - 0 ID=cds.g1020.t1;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 9427 9560 . - . ID=g1020.t1.exon2;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 9427 9560 . - 2 ID=cds.g1020.t1;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 9187 9256 . - . ID=g1020.t1.exon3;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 9187 9256 . - 0 ID=cds.g1020.t1;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS exon 8459 8868 . - . ID=g1020.t1.exon4;Parent=g1020.t1 NODE_852_length_16792_cov_42.8047 AUGUSTUS CDS 8459 8868 . - 2 ID=cds.g1020.t1;Parent=g1020.t1 #PROT g1020.t1 g1020 MLGYRIVRAVAGSPPGDALRSASGLVGGTQTAIVLHGILGCAQYWTPFAQLLTNTFPGWSFALVDLRHHGTSHRSGLSFTPSNTIEECAEDVLQLSLDSGLKPTAVIGHSYGGKVALHFAAKCASSLKDAWILDTNIGLSKAATDWLCSRLRRQSDAPSASAAAGAGALPVSGAVQWEWDFKPAAVISMRNHYASTNSWAMVDTLARRGTGVHVVRGGRSSRWTPDRLSTLDAAVQRSNGAVCAHVLANAGHWIHADDPMGLIALMQRYGVFL* # ORIGINAL: g5811.t1 original gene structure, not modified by PASA NODE_771_length_17925_cov_50.9747 AUGUSTUS gene 7583 11407 . + . ID=g5811;Name=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS mRNA 7583 11407 . + . ID=g5811.t1;Parent=g5811;Name=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS exon 7583 7617 . + . ID=g5811.t1.exon1;Parent=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS CDS 7583 7617 . + 0 ID=cds.g5811.t1;Parent=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS exon 7934 8868 . + . ID=g5811.t1.exon2;Parent=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS CDS 7934 8868 . + 1 ID=cds.g5811.t1;Parent=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS exon 9306 11407 . + . ID=g5811.t1.exon3;Parent=g5811.t1 NODE_771_length_17925_cov_50.9747 AUGUSTUS CDS 9306 11407 . + 2 ID=cds.g5811.t1;Parent=g5811.t1 #PROT g5811.t1 g5811 MATSKFAAAGDESFGCEKEITDVIRQIELSSHAQRTKYETKLRAVRALNDELRTKVSHLHDELTRVSAEKDALATGLRDAVDRAGEARKDTEKVLTRLNVSERARADDAAKHECDLAAAREALQLASKEKELLSARLETERDAALREKEALSSRWEERVRQVEAERDESVKAVKDAIDRRDGIAAERDELARALESEKSACGREKESLRFELERFKSAALREKEAVLFEFEAYKKGAEREREGNLESMRDAAIRDRDALFTEFEAYREMSQREKDVLLSEIEAVKASSMKEREASLREIETIKSRASSDWDSHARAGRLQARAESLEAAEVAIRSELLATRASITPSLHAWRSRAPLTESDVRGVTTLEIAAGLRDDIAYVIAELRRLRSATEAAVVSSSTPMMHHVSGVHVPQTPLPPTSIPAMHVLQYAHDGYGMGGGAHVSVDNRDMRCRGGACAVERSTLAEELVARRSEVNAAAERVRILEEELKGLRQRAEKDSFEIGRMREEARQKDARIEENRQQQQQQQQQQQRQHDHQFPAPTAGGHRSFDLHDEWSISGSQNPLCRDPTHADMAKRLRDAVTEVGDLRVKLSLNEADLARVRAKAADDVGVVLSQRDEALRRANATIGISSSTKPHVAAHVTVHESGHGDRSEGGERRSAPIDRLFDVPTATNAATTSSQQQQQQQQQQHGYASGTAAGSPRGDDVPLTSLAVEHSRLRDECARLRREVDSARAILAARSVGEGVFRPDPKNVGRVAIEERDKERRKLLEAESNALRGRVARMEQERAGMVSTIQALQQDLHSITGGRRALNGFVDTVDDFLSHAETRVVRMDSPAKRSGHVPSWVSRYDAGGAGTHTDTAADSFASRWQPDDTAKRAEYDPRALRSTAAYDSGATAYNHNTGNMDNDFDEDDYSELASKARRQAATHTPTSARSDAGDATATEDKYARSAADTTENDEGADLDASFSDADELSTGRLADLLRRHKPTRTKQSNSVLYLSPKKGRRGERGAESMSDVSSDAS* # PASA_UPDATE: g5810.t1, single gene model update, valid-1, status:[pasa:asmbl_9304,status:12], valid-1 NODE_771_length_17925_cov_50.9747 . gene 294 5505 . + . ID=g5810;Name=g5810.t1 NODE_771_length_17925_cov_50.9747 . mRNA 294 5505 . + . ID=g5810.t1;Parent=g5810;Name=g5810.t1 NODE_771_length_17925_cov_50.9747 . five_prime_UTR 294 294 . + . ID=g5810.t1.utr5p1;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . exon 294 410 . + . ID=g5810.t1.exon1;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . CDS 295 410 . + 0 ID=cds.g5810.t1;Parent=g5810.t1;5_prime_partial=true NODE_771_length_17925_cov_50.9747 . exon 609 2183 . + . ID=g5810.t1.exon2;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . CDS 609 2183 . + 1 ID=cds.g5810.t1;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . exon 2573 2914 . + . ID=g5810.t1.exon3;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . CDS 2573 2914 . + 1 ID=cds.g5810.t1;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . exon 3181 5505 . + . ID=g5810.t1.exon4;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . CDS 3181 5326 . + 1 ID=cds.g5810.t1;Parent=g5810.t1 NODE_771_length_17925_cov_50.9747 . three_prime_UTR 5327 5505 . + . ID=g5810.t1.utr3p1;Parent=g5810.t1 #PROT g5810.t1 g5810 IECIEYILNTLSANIDHPDGARRTPLYYAMRAGQLDAVTYLVSRGACVNALSGTLATVLHAACEIPSDSTARCIEYIVGLGVQKASNSAADALSLQGSNAVGCIVTPASHTPEAIISTHSERVHLVPTRRLQARDVQMTSADGDDGEDHGTATAIHLVEHFAESAASDAVVGWDDIVLPDVDSIPSPDAVRAHALIASARTQQRRSGFAPGNAGIRWESVAVNIDAADIDGITPLSLACTKGGHGCVVALLRAGANPSTPYGPFLANRMFTSGESRLAPVSKSIHDALVTIGQSSGLADVTTIAIKLGEYALSLATTLLCPSRASAPPSLEFPAMCEELSRIGVFPMSWRIVSLSTQVTCPDPLGKAWDLLDARMLQMEASLTRMNFPFSRGLAMLEPEAIAAVEAAMIAWDHVSREASGAPGTLWKVLSPPDVADLPDTAYGEFADGGETVDTLSRLPIPKTRLALFLRSHIPLVNALLQRHAHPSQLGPSDGLSFVFERHAHALNLQLRRARLLHKVSEARPIGSMETMRAVVRGHVTLDRNSIYETAVCSEMKRMDVHAMMRMYITFLGEPGQGDGVTREALCIGLAKLADPSLGLFESRDGGMTLHPARHSAVAGLGCMEAFDVFGRMLAMALLKGISVPVRLSAPLVKHMMGLPLEPEDIRDYDEELYRRKVRYILDNDIGDLGLTFTETFQASPILPLDYQRRVFASDAAAGRPFENPWPRDPPQKHVHMRPGTLRRTYSVRFDSGPGDEFDAVRAALSLDGHVDPDLSLLRADRTRAYRMQQQIQVETMRRRASLTPGDGFHANDGEARNSSAQEVDTTRNGDADMWAQDLALERRARPQIGLYEMLGEVISGDTTQRGEPVNRRRDRDSADMADGANEASMFESLTLLRQASVRRRRYPLTRTDEPNPPLWHERSTRRSAVDSNPGAATTRASSDLPAAGNGRLESPPLMRTPSPEDLFGTLRALDPFAEIAEQVRLRQQQQPVAQDPWRRVPFFEVEVQRRRVHEALHPGEEAGHPVRQPQTQIVPAATSTHSVTPPPGPISSQILDEIILDSVHEGNRIHFPWEINGATQHSQAEHSQAETDVQDPSLSAGGRGGYVHPPPYERTTVPVHVPVPVPELDIEAQLGNVIPPGDSARAASPPSLGDVVPSFSAGVGLHDATGSVVKTERAWDVLLVPGGDSARVTEDNKRTYVGLFCRHTTSFGLTRQLDAIKKGFTTLFPETLLRSLLGPNELVRLIHGADGDAIDVDDWQRSAVYPGSERERMGVDGVASNSGATESEDSAVELCRWFWEAVRSFTPEERIALLKFCTGCSRPPYGGFCGQPNGVGPSTLSISVVPTASPESLPESSTCFSMLKLPMYRSYAELRQRVLVAISYGSEGFDMA* # PASA_UPDATE: g5812.t1, single gene model update, valid-1, status:[pasa:asmbl_9302,status:3], valid-1 NODE_771_length_17925_cov_50.9747 . gene 12116 14757 . - . ID=g5812;Name=g5812.t1 NODE_771_length_17925_cov_50.9747 . mRNA 12116 14757 . - . ID=g5812.t1;Parent=g5812;Name=g5812.t1 NODE_771_length_17925_cov_50.9747 . five_prime_UTR 14239 14757 . - . ID=g5812.t1.utr5p1;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . exon 13578 14757 . - . ID=g5812.t1.exon1;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . CDS 13578 14238 . - 0 ID=cds.g5812.t1;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . exon 13196 13302 . - . ID=g5812.t1.exon2;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . CDS 13196 13302 . - 2 ID=cds.g5812.t1;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . exon 12116 13032 . - . ID=g5812.t1.exon3;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . CDS 12418 13032 . - 0 ID=cds.g5812.t1;Parent=g5812.t1 NODE_771_length_17925_cov_50.9747 . three_prime_UTR 12116 12417 . - . ID=g5812.t1.utr3p1;Parent=g5812.t1 #PROT g5812.t1 g5812 MSALKNLCWLFCCPPLPSRIAAKIAFIPPEPTYDFVDADAVDAADAAAPPSANVPKLETTPIDRSTSRKGKREYLSMVDDGVLRTDRVQVMRLRTRRRTVIAGMFYEHLGASLTILFSHGNAVDLGQMAPICIRLARDLRCNIMLYDYSGYGLSTGESTEENLYADIDAAWDYLVEERQIPPSHIVLYGQSIGTVPSVDLGARKNPLAVVLHSPLASGIRVFKKVPATCCCDPFPSVEKIHLIESQVLIIHGLADKMISADHGKMLHAKCTNPAIPLWVRNAGHNDIESFPEYMGRLRIFFDELYASLPSTCRPSIIHQSMQMLLMQPGQDAAQGSAAVPATAPSRSRIPSAVEQASVAPTSATTTTTTTTATPATTTSTSSTTTPASTAAGGVSDPIAAQGSVRRPLSYSNSYRRATVRKQGKQPLGAVFAAPDGAAASGASAVNGAIAIEDPPATTEV* # PASA_UPDATE: g5813.t1, single gene model update, valid-1, status:[pasa:asmbl_9303,status:3], valid-1 NODE_771_length_17925_cov_50.9747 . gene 15012 16641 . - . ID=g5813;Name=g5813.t1 NODE_771_length_17925_cov_50.9747 . mRNA 15012 16641 . - . ID=g5813.t1;Parent=g5813;Name=g5813.t1 NODE_771_length_17925_cov_50.9747 . five_prime_UTR 16552 16641 . - . ID=g5813.t1.utr5p1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . exon 16412 16641 . - . ID=g5813.t1.exon1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . CDS 16412 16551 . - 0 ID=cds.g5813.t1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . exon 16116 16198 . - . ID=g5813.t1.exon2;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . CDS 16116 16198 . - 1 ID=cds.g5813.t1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . exon 15880 15975 . - . ID=g5813.t1.exon3;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . CDS 15880 15975 . - 2 ID=cds.g5813.t1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . exon 15676 15764 . - . ID=g5813.t1.exon4;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . CDS 15676 15764 . - 2 ID=cds.g5813.t1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . exon 15012 15490 . - . ID=g5813.t1.exon5;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . CDS 15041 15490 . - 0 ID=cds.g5813.t1;Parent=g5813.t1 NODE_771_length_17925_cov_50.9747 . three_prime_UTR 15012 15040 . - . ID=g5813.t1.utr3p1;Parent=g5813.t1 #PROT g5813.t1 g5813 MNRIIDVHAHLCADELAADLDALLTESCANGIVATIAVCESPLEFERARSIARKHPDSVALNFGLHPVQHTVVDDGAPSQTRSVNMDDLPGAITAIEMSIDDLVGIGEVGLDFSPNVAVDARCKEDQRAVLRAMVELSLRHDLPLNVHSRSAGRPTIQLLAECGAKRVVLHAFDGNAKVVKTGLDLGYHFSIPPSIARLPAVESLAAMVPLDRLLIETDAPALAPVKQTRNVPSNASISLSHIARVKDISVADAAHATTDNALRLFSRLGTMLPSISHNRVYVCI* # PASA_UPDATE: g7042.t1, single gene model update, valid-1, status:[pasa:asmbl_1816,status:12], valid-1 NODE_1509_length_10825_cov_40.8433 . gene 4088 5298 . - . ID=g7042;Name=g7042.t1 NODE_1509_length_10825_cov_40.8433 . mRNA 4088 5298 . - . ID=g7042.t1;Parent=g7042;Name=g7042.t1 NODE_1509_length_10825_cov_40.8433 . five_prime_UTR 5179 5298 . - . ID=g7042.t1.utr5p1;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . exon 4785 5298 . - . ID=g7042.t1.exon1;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . CDS 4785 5178 . - 0 ID=cds.g7042.t1;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . exon 4307 4510 . - . ID=g7042.t1.exon2;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . CDS 4307 4510 . - 2 ID=cds.g7042.t1;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . exon 4088 4191 . - . ID=g7042.t1.exon3;Parent=g7042.t1 NODE_1509_length_10825_cov_40.8433 . CDS 4088 4191 . - 2 ID=cds.g7042.t1;Parent=g7042.t1 #PROT g7042.t1 g7042 MPTQVIVNVYDLYWANEYTSALGVGVFHSGIEVGGFEYAFGGHDFPNVTGVFQVTPRMILAPDMKFREAIIVGETHLSELELRAVVMEFASRYLGTTYSILERNCNHFASEFCMALCGKPIPSWINRLAYLGTWMPQCIIPSFEPPPGTAGSTTQDNRGHTCHGHSHGPAQNKRRGTHAKTQQPKATQSRSDDYSEAFSGQGYTLSSGSAADSSPSSFGEGASRASRGGRAPT* # PASA_UPDATE: g7041.t1, single gene model update, valid-1, status:[pasa:asmbl_1815,status:12], valid-1 NODE_1509_length_10825_cov_40.8433 . gene 157 3649 . - . ID=g7041;Name=g7041.t1 NODE_1509_length_10825_cov_40.8433 . mRNA 157 3649 . - . ID=g7041.t1;Parent=g7041;Name=g7041.t1 NODE_1509_length_10825_cov_40.8433 . five_prime_UTR 3471 3649 . - . ID=g7041.t1.utr5p1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 3441 3649 . - . ID=g7041.t1.exon1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 3441 3470 . - 0 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 3197 3325 . - . ID=g7041.t1.exon2;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 3197 3325 . - 0 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 2933 3023 . - . ID=g7041.t1.exon3;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 2933 3023 . - 0 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 2649 2737 . - . ID=g7041.t1.exon4;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 2649 2737 . - 2 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 1424 2367 . - . ID=g7041.t1.exon5;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 1424 2367 . - 0 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 924 1017 . - . ID=g7041.t1.exon6;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 924 1017 . - 1 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 542 637 . - . ID=g7041.t1.exon7;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 542 637 . - 0 ID=cds.g7041.t1;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . exon 157 292 . - . ID=g7041.t1.exon8;Parent=g7041.t1 NODE_1509_length_10825_cov_40.8433 . CDS 157 292 . - 0 ID=cds.g7041.t1;Parent=g7041.t1;3_prime_partial=true #PROT g7041.t1 g7041 MSSQGVNVKPVRQRSFTADGAPAATTPKPVVVTATKTAALNAQQPILPSDFQEALRRHGFKFSEEDFATFKAKLPANQAIRPDAFVAAAKAVLSDKVTTSAKGVTRSSSFTTPPQPTRPASASGAVSTTTTGGVKVTAKGALAPRGGSLNTKPVTVKSGDLSPHASPRATITIPPKSPSSEPRRAGNIVVKTVSNSGAASGVNAAASPRTVVSVKAKASTPQAHSTDSENVATSGNPSPTLHAAAPAPAPSTPDVVDALAPVAGQMDAGGPVPSDRGGDIEEDDASEEDDDDDEGDDSSMEGLEADESVRRIAAMMRSMLAEGKVALETDKRSAVVEQKEDVHIELTRFFKKTGPGSTPGGKSEEDELARSASPRRGVGALGVQESIDEFDMLKKERDVAFDELDGVRDRLVKLEADHFDMLRQERDRAINRADKLEETCRLMSEEYDRMRTRVKSVEPEIEFAKRENDQLKMQLESTMRQYESSKASYEEEVQLLRDQVAKLKNMVPKEGAPPPPAPGMGMFPGLPKMETPANSV # ORIGINAL: g7043.t1 original gene structure, not modified by PASA NODE_1509_length_10825_cov_40.8433 AUGUSTUS gene 5719 10417 . + . ID=g7043;Name=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS mRNA 5719 10417 . + . ID=g7043.t1;Parent=g7043;Name=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS exon 5719 6393 . + . ID=g7043.t1.exon1;Parent=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS CDS 5719 6393 . + 0 ID=cds.g7043.t1;Parent=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS exon 6596 9520 . + . ID=g7043.t1.exon2;Parent=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS CDS 6596 9520 . + 0 ID=cds.g7043.t1;Parent=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS exon 9944 10417 . + . ID=g7043.t1.exon3;Parent=g7043.t1 NODE_1509_length_10825_cov_40.8433 AUGUSTUS CDS 9944 10417 . + 0 ID=cds.g7043.t1;Parent=g7043.t1 #PROT g7043.t1 g7043 MSSVEGAAVAGGQGIAPPLDWTRRLVDYFLLTGVTDELEEAAPEPDSPLVNPLRRLHTPKLLARYPFGNHEDAEFPENCEHFCFPSKVKLVHGEVALPVTADGLSSSNHSGNEVDANDENVEITLPNPTYHTFALTEMTGTKLYGHALCFHEPISDAMRHALLGRVDSWLDKATASDSPPEHADFVLINKVRQEPEGAGKVYAPKAMCIVSHWPFLTFFGDYLKQLFIVMTGRRGYTGLDFERYVAHICHEIPLPPPGKLEVSIKLHDATLFLCRPPANKYHPTVFNFSLEPFFLALSVQNVLTLFACAVGECKIVLYSRRYSMLHLAAEIISGLMYPLRWQHVFIPVLPAGMLSFLHAPMPFLIGIHSSIRDTEEPPPDVVCVDLDGDVISCPEWESVVPSLPKSIGKKIAGKLEAMYSVLRERYYAGDRLLAEGCYGVTDDAFPIGIKAWVPFNSKSAISTNHSGTAPAEGHNAHSHAAPFHLSRSASSSGLKVPAMPLPSANTNATNTIAPAKPTSPSSTASSSPSAVKRATPGAVSPKPAPPRPPLPHQPMSLGNAAVEASRQMDPQRAVTAAPAAAAAAHEHMLRRGSAHRNRSLSLHGSSDGRTSMIRSDSITSIDEGEGLANPADGESAVDLNFDQAALPVAPPRKRRGVPQSMYVSVPNSNSVDSLHVNVVDEHRQHHGELTAAGTDADGAHDEPSPRRRSLSLLAAFAPKSPRGEGSNSSSLSSGSAPSASLPPRPSHNNNNNNNNNNNNNNNNNNNNNNTNTNTNSQSPHAPARAESPSGAALSSQSAPHHVPSSESSPVATKPPLHPSTSATRSPSLLRRSPALIRRESSQGRLLRAATCYETVWPKDEDNAATGDAFGSSAAVGVSVGIDARSVAGMDTPRSLNSPSSTSLDSRDSGLRDSVSTITSASAVSTVASSESMRDSGLSLLHDDPARHAHHTTPVEEHAGHAAPVPPPRKKGRKGTTGSATQGDAYLALHPSSGSVSKETSTSRDDTDKVPSTLLAPVHAAPVRQSHERDKLVRQASNTSAAAVATQRSAPTRPLLHHAFEGKPSSPSSTCFVCNAAASSSGGQAAVRCVRCGVVCHKKGCIDKAMALGGCEPQFDGEAVRAAFLNVFVTLLKGYRARLLSPDEDDWRNPREISEAELFNKDAFLNDSDREFRPFLAKILDSQAFAQFSIERIERDPNDFEVLFFDESIKAKHNRSITKLTKSATPFLDDRSYEVSATFDAPPPTPVPFSKSRSGSTKKDPLPNIGDDIGVGTPSSLVPRFPSLLRQEYLVHTRVALLVSDEEMVRLKQHTNALARNERISRLANAVCDPPSPRPSLLTIFFALFDVESMGTAPKTLT* # ORIGINAL: g1279.t1 original gene structure, not modified by PASA NODE_4126_length_2145_cov_34.2525 AUGUSTUS gene 85 1846 . + . ID=g1279;Name=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS mRNA 85 1846 . + . ID=g1279.t1;Parent=g1279;Name=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS exon 85 213 . + . ID=g1279.t1.exon1;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS CDS 85 213 . + 1 ID=cds.g1279.t1;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS exon 415 559 . + . ID=g1279.t1.exon2;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS CDS 415 559 . + 1 ID=cds.g1279.t1;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS exon 1046 1255 . + . ID=g1279.t1.exon3;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS CDS 1046 1255 . + 0 ID=cds.g1279.t1;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS exon 1429 1491 . + . ID=g1279.t1.exon4;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS CDS 1429 1491 . + 0 ID=cds.g1279.t1;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS exon 1652 1846 . + . ID=g1279.t1.exon5;Parent=g1279.t1 NODE_4126_length_2145_cov_34.2525 AUGUSTUS CDS 1652 1846 . + 0 ID=cds.g1279.t1;Parent=g1279.t1 #PROT g1279.t1 g1279 QLSPGPEALVSMLTGMAIADYDTEEDRIEAAAILCLLVGIITLLGFIDGVLSRSLLNGFVLATAFVIMIEQLRGLLGITSMWSHTSSTLDKVKFLCRHTDQVHWIPSVMGICSLIVLVSLTILKRCFPRNRVIQFFPGILLVVVVYTVISWKADLPSQGLDILGKVEAGFYAPRMTGVTINKIRDLSADAAIIAIAGFVEAIAISKSQASACGYAVSPNRELVAFGCVSLDSVMLMHTVESACYCI* # PASA_UPDATE: g13956.t1, single gene model update, valid-1, status:[pasa:asmbl_8309,status:12], valid-1 NODE_5834_length_703_cov_44.9554 . gene 1 703 . + . ID=g13956;Name=g13956.t1 NODE_5834_length_703_cov_44.9554 . mRNA 1 703 . + . ID=g13956.t1;Parent=g13956;Name=g13956.t1 NODE_5834_length_703_cov_44.9554 . five_prime_UTR 1 1 . + . ID=g13956.t1.utr5p1;Parent=g13956.t1 NODE_5834_length_703_cov_44.9554 . exon 1 703 . + . ID=g13956.t1.exon1;Parent=g13956.t1 NODE_5834_length_703_cov_44.9554 . CDS 2 391 . + 0 ID=cds.g13956.t1;Parent=g13956.t1;5_prime_partial=true NODE_5834_length_703_cov_44.9554 . three_prime_UTR 392 703 . + . ID=g13956.t1.utr3p1;Parent=g13956.t1 #PROT g13956.t1 g13956 EEVRRKITAANAELSHGQVTSMLRRWLVESKGVVALSYWDDNKVMAEWFEQQREVFLQNISTIRQSALIDRVSRLVKDDPDAAMNSVLALLEHLTTAQREDLASILAAGPPELPSPASEAGVPIRDSLN* # PASA_UPDATE: g12735.t1, single gene model update, valid-1, status:[pasa:asmbl_8192,status:12], valid-1 NODE_5607_length_782_cov_29.6379 . gene 240 707 . - . ID=g12735;Name=g12735.t1 NODE_5607_length_782_cov_29.6379 . mRNA 240 707 . - . ID=g12735.t1;Parent=g12735;Name=g12735.t1 NODE_5607_length_782_cov_29.6379 . five_prime_UTR 707 707 . - . ID=g12735.t1.utr5p1;Parent=g12735.t1 NODE_5607_length_782_cov_29.6379 . exon 645 707 . - . ID=g12735.t1.exon1;Parent=g12735.t1 NODE_5607_length_782_cov_29.6379 . CDS 645 706 . - 0 ID=cds.g12735.t1;Parent=g12735.t1;5_prime_partial=true NODE_5607_length_782_cov_29.6379 . exon 240 387 . - . ID=g12735.t1.exon2;Parent=g12735.t1 NODE_5607_length_782_cov_29.6379 . CDS 240 387 . - 1 ID=cds.g12735.t1;Parent=g12735.t1;3_prime_partial=true #PROT g12735.t1 g12735 LWSAVQFVFCTPGNATEYSAEDLFGEGLQWAGCTLMYLLGQHRRFEVLDFSYHIANVNRVDLKEDSVSGT # ORIGINAL: g12636.t1 original gene structure, not modified by PASA NODE_1125_length_13775_cov_41.5118 AUGUSTUS gene 3076 4701 . - . ID=g12636;Name=g12636.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS mRNA 3076 4701 . - . ID=g12636.t1;Parent=g12636;Name=g12636.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 3076 4701 . - . ID=g12636.t1.exon1;Parent=g12636.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 3076 4701 . - 0 ID=cds.g12636.t1;Parent=g12636.t1 #PROT g12636.t1 g12636 MTSLSSLPIEVLVARVVPFLDNATTIALSQTNSTLRSHLRHLCVFKLTPKWSRLFYEDESFCSLVTRFIPSARLAIQFFCVQGDRSAYWFGVKALEWRNRVVDVAALGGVHTLDLTKCYEVVDVSALGGLHTLNLTKCYGVVNVSSLGGVHTLDLSDCKGVVDVFALGGVHTLNLTSCSGVVDVASLGRVHKLNLSFCERLVDVSALGCVHTLDLSDCKGVVDVSALGGVHTLNLSRCNGVVDLSALGGVHTLDLSDCMGVVDVSALGGVHTLTLDQCRRVVDVTALGSVHTLNLSNCNGVMDVSALGGVHPLNLYGCDGVVDVSSLGGVHSLNLYGCNGVVDVSALGCVHTLDLSYCDGVVDFSALGGVHSLNLYGCIRVVDVSALGAVHSLNLYGCCRVVDVSALGGVHTLNLSFCDGLVDVSALGGVHTLNLHGCRGVVDVSALGCVHTLDLSFCYGVVDVSALGDVHSLDLSKCNGVVDVSALGGVHCLDLSECYGVEDVSALGHVHTLNLSQWDGLVGVTALGGVHTLKLDGAIKI* # PASA_UPDATE: g12635.t1, single gene model update, valid-1, status:[pasa:asmbl_479,status:12], valid-1 NODE_1125_length_13775_cov_41.5118 . gene 82 1714 . - . ID=g12635;Name=g12635.t1 NODE_1125_length_13775_cov_41.5118 . mRNA 82 1714 . - . ID=g12635.t1;Parent=g12635;Name=g12635.t1 NODE_1125_length_13775_cov_41.5118 . five_prime_UTR 1670 1714 . - . ID=g12635.t1.utr5p1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 1651 1714 . - . ID=g12635.t1.exon1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 1651 1669 . - 0 ID=cds.g12635.t1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 1407 1520 . - . ID=g12635.t1.exon2;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 1407 1520 . - 2 ID=cds.g12635.t1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 1128 1234 . - . ID=g12635.t1.exon3;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 1128 1234 . - 2 ID=cds.g12635.t1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 825 938 . - . ID=g12635.t1.exon4;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 825 938 . - 0 ID=cds.g12635.t1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 594 701 . - . ID=g12635.t1.exon5;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 594 701 . - 0 ID=cds.g12635.t1;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . exon 82 310 . - . ID=g12635.t1.exon6;Parent=g12635.t1 NODE_1125_length_13775_cov_41.5118 . CDS 82 310 . - 0 ID=cds.g12635.t1;Parent=g12635.t1;3_prime_partial=true #PROT g12635.t1 g12635 MVKKSTKSKSKRQSASRRYKNIKLAKEKNRKERKESKKHPNAGKSKKDPGVPNLWPFKDQVLKQIEERKEKLEDVKRQQKEARRKAVEKRRSTDLTKLTKDAEKRAGEFDKKSGDKEERQIGAGGKGGRSFDNSRRAYYKEFRKVVEAADVILEVLDARDPMGCRCPEIERAILSMGANKKIVLVMNKIDLVPRDVAEQWLGILRKELPTIAFKASTQSQKGHLGQSQVP # ORIGINAL: g12637.t1 original gene structure, not modified by PASA NODE_1125_length_13775_cov_41.5118 AUGUSTUS gene 5333 13506 . + . ID=g12637;Name=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS mRNA 5333 13506 . + . ID=g12637.t1;Parent=g12637;Name=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 5333 5558 . + . ID=g12637.t1.exon1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 5333 5558 . + 0 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 5757 5945 . + . ID=g12637.t1.exon2;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 5757 5945 . + 2 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 6389 6493 . + . ID=g12637.t1.exon3;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 6389 6493 . + 2 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 6897 7002 . + . ID=g12637.t1.exon4;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 6897 7002 . + 2 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 7275 7331 . + . ID=g12637.t1.exon5;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 7275 7331 . + 1 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 7658 8092 . + . ID=g12637.t1.exon6;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 7658 8092 . + 1 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 8379 9013 . + . ID=g12637.t1.exon7;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 8379 9013 . + 1 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 9273 9361 . + . ID=g12637.t1.exon8;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 9273 9361 . + 2 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 9620 12961 . + . ID=g12637.t1.exon9;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 9620 12961 . + 0 ID=cds.g12637.t1;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS exon 13330 13506 . + . ID=g12637.t1.exon10;Parent=g12637.t1 NODE_1125_length_13775_cov_41.5118 AUGUSTUS CDS 13330 13506 . + 0 ID=cds.g12637.t1;Parent=g12637.t1 #PROT g12637.t1 g12637 MKRVRVDDEWAFLDKRPRRSDDARDADIHLHNSSDSQRDQCVTDSNNSFQNAHVDDAIFDLIGVTESVVSKAVGDVGAENALIAAAVDVRAGTSEEIDAILDESLCVIDGCQRIDLLVEEGLSGINIETSNRNQCTPFVHEACLAALETQSRQLGVDFNALAAEYVVGLLKGHVSFPWTSPLKCLTADEDARIRLATAVLAGRGLRIERKHLKSRIESLFEAPTDNTSTSGLRKRLVLAYSLDDTAVYTAEDLLLHYHRLSFRAPAKNALQSVHAVDSPGCKLFVALIEDLADGVRSAPSMACRDDEGPSMQLVSIANDAELLAYIAPRLASCAFQRSAGVKASADDAAIGGFAASIIDSLVGRSDTPTFAKGCDAARLVLRHVRGAAVEQTVMSAAHSAILTSLLGSGSALPQRNSPGDSGATTKGLNDGPREYVSAIASLQEKSVPDCILSLSAELSSCARSAHSSSKEAVSAFSRAVHSVVDGHKFTVQQQAGVQHHSHINRTLSLNWIALRATVMYMALWCGKELETWVDAVVAEACASSDTFLFFVALTVLREGGRAGAHSFVPYADAMERLLLTDGQSAALSRNARMAEFVLASLSHVTHVESANLSRIHARIVSNCATLKDKPFAADFLKRIRARLAAINASGGSEGVSRNDGDVDTVDDGRVAASDAVEAFRTYGRIPKAVMEMSVFSRDRFRRVFLPALLTRTDGAEFEHRIRLVEALEKAGKIPRQAIEEFELACAAKEKEDDTCTHNRNDVQKGLDGDSAQSRSLLPPLSVSGAMDCLFGAVQSCARAPSAEDRAAVPATARKALICVDAALLAACRPPAESGAVRRTARDLLSGAVAFLREEKQCVEHTSCSMWAFCVHSIFASAMTHTPRLLRETAAHVVRDVCAFVLNGCDSLGSGDCVLSGRNVDHGDENAHLRVLGCICAHLSVFAGVTEMPLLDIAPPFSSGVVGPNSAQGNAVNAAIASMCISSAQHMQRAMSFIAGIMEVTRHRFVSTDAGKIGSDGCGVSLEHESQVHPADLSLWSIRTDINSSAFPLAMVVAEWIALRTSTASILCKEGMQSAVESSLLKAIVGSCNALKDDVSQWRARGNGLGCTDWAALELRVSPSEDICVGHLRTLLLRCCALTVASTAPPRQQRDHGGCNNSQRCWSVVAEGTAHALSDVQSERRPSYGDLLVLLRWLVVDAPDGDVAASDSDRRTHAAPVNRRGLVAEDRPMAIPWLRNAIQDTLDSSADCSQERFLAKIDGLIRIASVCVGHSDVFFCPSQPASGASAIGDAVSVLNELCAAYWSGSPAPHPCALPGSIVGYFYECLAACNANANGSVPSANGACAVLKECPWMFSSVISLWPLLNASDCNRLVRNRSSTQTSFRQISTAVTTVLKWRSDLLDASGNDLASTLAVEQCAPMSVLARAVLSQLLLSADPGARSRSVALRLATAVSYDQARVSAAVPGAVSNNTGTLVTRGKGLDAATMGLLADDISVAVRPALGTVSAGTSRMTLLQARTLSLCIVDAAVAGIAPYSLDLASHIYDMCAHPLPDAAQGTAPGVLPGVRAAEMPSSLRKIVAGMISADPSLIAVFAADSTHTASNGLSATQEEKAARSAMVATRNGLECRKDGTSRTGNPVSGRTHKARQGAGYPDGAARARCRLRMGRALSLFAAVLDFDPGQLRADFLSKEPTKQQLGRDFLLALLSQYATMVESYAVGFDAVGVVEMTIKGVGQFSLPRTLSAIAAFVERIVGVAPAASLSAVDNTLLSRIAKIDPHMCARLRARLGA* # ORIGINAL: g3005.t1 original gene structure, not modified by PASA NODE_4903_length_1152_cov_68.1848_potentialcontaminant AUGUSTUS gene 1 1152 . - . ID=g3005;Name=g3005.t1 NODE_4903_length_1152_cov_68.1848_potentialcontaminant AUGUSTUS mRNA 1 1152 . - . ID=g3005.t1;Parent=g3005;Name=g3005.t1 NODE_4903_length_1152_cov_68.1848_potentialcontaminant AUGUSTUS exon 1 1152 . - . ID=g3005.t1.exon1;Parent=g3005.t1 NODE_4903_length_1152_cov_68.1848_potentialcontaminant AUGUSTUS CDS 1 1152 . - 1 ID=cds.g3005.t1;Parent=g3005.t1 #PROT g3005.t1 g3005 VLESEVLTAQGAISSKEAEVTSVREEIASVEARAVSAEGRVGELESAIDALKSEVLTARGAISSKEAEVASVREEIASVEARAVAAEGRVSELESAIGVLKGEALTAQGAISEKEAEVTSAREESASVEARAAAAEGRVSELESAIGALQSEVSCLKEKGARDDVSIAELRASFERNAGETAVELQTRTEALGVAEEKIRVLESEVLTAQGAISSKEAEVASVREEIASVEARAASAEGRIGELESAISALKSEVLTAQGAISSKEAEVTSVREEIALVEARAVAAEGRVGELESAIGALKSEVLTAQGVISSKEAEVSNVREEIASVDARAVAAEGRVGELESAIGALKSEVLSAQGVISSKEAEVTSVREEIASVEARAAA # PASA_UPDATE: g7202.t1, single gene model update, valid-1, status:[pasa:asmbl_1706,status:12],[pasa:asmbl_1707,status:12], valid-1 NODE_1475_length_11064_cov_42.1805 . gene 159 5056 . - . ID=g7202;Name=g7202.t1 NODE_1475_length_11064_cov_42.1805 . mRNA 159 5056 . - . ID=g7202.t1;Parent=g7202;Name=g7202.t1 NODE_1475_length_11064_cov_42.1805 . five_prime_UTR 4988 5056 . - . ID=g7202.t1.utr5p1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . five_prime_UTR 4629 4643 . - . ID=g7202.t1.utr5p2;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 4988 5056 . - . ID=g7202.t1.exon1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 4598 4643 . - . ID=g7202.t1.exon2;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 4598 4628 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 4396 4480 . - . ID=g7202.t1.exon3;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 4396 4480 . - 2 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 4113 4188 . - . ID=g7202.t1.exon4;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 4113 4188 . - 1 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 3788 3886 . - . ID=g7202.t1.exon5;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 3788 3886 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 3456 3576 . - . ID=g7202.t1.exon6;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 3456 3576 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 3118 3176 . - . ID=g7202.t1.exon7;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 3118 3176 . - 2 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 2807 2869 . - . ID=g7202.t1.exon8;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 2807 2869 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 2363 2443 . - . ID=g7202.t1.exon9;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 2363 2443 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 1875 2012 . - . ID=g7202.t1.exon10;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 1875 2012 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 1628 1709 . - . ID=g7202.t1.exon11;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 1628 1709 . - 0 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 937 1257 . - . ID=g7202.t1.exon12;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 937 1257 . - 2 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 564 664 . - . ID=g7202.t1.exon13;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 564 664 . - 2 ID=cds.g7202.t1;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . exon 159 282 . - . ID=g7202.t1.exon14;Parent=g7202.t1 NODE_1475_length_11064_cov_42.1805 . CDS 159 282 . - 0 ID=cds.g7202.t1;Parent=g7202.t1;3_prime_partial=true #PROT g7202.t1 g7202 MSKDTLQNLADKACHHRQDAEDWGLITDFCDNVQRVPNGEIEASVIILDKVRNPNAKVALLALTLLDACMKNCGKEFQHLVGKFKFLNEMIKLVSNKYYANTPDPVKKRILELIQAWAIGFPDETKINEAYQMLRRQGHEFPLTAIDGAPPIATSSDFLDKDIEASQKNAFEDEDNNVVLHRLLKSKNPKDLERANAMIKKMYNQESKKVEGEVKLRQDLELVHNNVKLLTEILSNHRPLEGRIEENDLATDLHRSVSLMQPRLQRLIQKINEEDARSGLNSPILEDVLRLNDALNKAVESYEALREGRPLPHRNSGDASAPSAASTYGVNSLADLFVDFASPAVPSNALAGLGFGMPSAPMQQYTQAPSRAQGSTLLDDQLAALGLDGPSTSTPSEPSLIGAPIGNAPGHHITLAHSTLPPQSQQAPPAYGALPAYSWGAPTPLYQPSSPAVASYSPAA # ORIGINAL: g7205.t1 original gene structure, not modified by PASA NODE_1475_length_11064_cov_42.1805 AUGUSTUS gene 9234 10779 . - . ID=g7205;Name=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS mRNA 9234 10779 . - . ID=g7205.t1;Parent=g7205;Name=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 10732 10779 . - . ID=g7205.t1.exon1;Parent=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 10732 10779 . - 0 ID=cds.g7205.t1;Parent=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 9620 10594 . - . ID=g7205.t1.exon2;Parent=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 9620 10594 . - 0 ID=cds.g7205.t1;Parent=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 9234 9431 . - . ID=g7205.t1.exon3;Parent=g7205.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 9234 9431 . - 0 ID=cds.g7205.t1;Parent=g7205.t1 #PROT g7205.t1 g7205 MVFCMLVSPLCGLLSQILIIIKTWLMYVVIRLHAHSRVKKQGNEHADAPQSIPTASSNDSFYFEGSSTDGIHLYARMAYRGDGTVETWLGLRVPGLGYPLKYERYDLVPLEHAVPGGKELSASGPLRFIRNQAMQQWTLVYDGYAWPEEGGVNPTSDGQHIDKRHHVRAEFEWKALSGVFDMDVHLDSWPLAKSMAVESWSPSYFKEMKQSHQTHYEQHGRLQGTIRIKLPSGGLVVDLPTVVLRGMRDHSFGARDWGYMQRWVTLFGSLKDGRAFHVTLVKHPLSKAIVAGYLFTPGSGFVSVRSADVNIDDLGGDGRPPAQFAFMFGLSNGRKVRLSCMVRDRIAFHLPPKKAVLFEQMAFFTIDGVEGEGIAEFDYSLAAYPGALSVAVGKDTCGMTRHPMCR* # PASA_UPDATE: g7203.t1, single gene model update, valid-1, status:[pasa:asmbl_1705,status:3], valid-1 NODE_1475_length_11064_cov_42.1805 . gene 5446 6841 . + . ID=g7203;Name=g7203.t1 NODE_1475_length_11064_cov_42.1805 . mRNA 5446 6841 . + . ID=g7203.t1;Parent=g7203;Name=g7203.t1 NODE_1475_length_11064_cov_42.1805 . five_prime_UTR 5446 5538 . + . ID=g7203.t1.utr5p1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 5446 5622 . + . ID=g7203.t1.exon1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 5539 5622 . + 0 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 5743 5844 . + . ID=g7203.t1.exon2;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 5743 5844 . + 0 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 5951 6010 . + . ID=g7203.t1.exon3;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 5951 6010 . + 0 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 6125 6194 . + . ID=g7203.t1.exon4;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 6125 6194 . + 0 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 6405 6540 . + . ID=g7203.t1.exon5;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 6405 6540 . + 2 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . exon 6688 6841 . + . ID=g7203.t1.exon6;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . CDS 6688 6796 . + 1 ID=cds.g7203.t1;Parent=g7203.t1 NODE_1475_length_11064_cov_42.1805 . three_prime_UTR 6797 6841 . + . ID=g7203.t1.utr3p1;Parent=g7203.t1 #PROT g7203.t1 g7203 MPSALVLLADGAEEMETVIIVDVLRRAEIDTFLAGIAGSHEVTCSRRVVIKPDGSLEDAKAKGPFDIIILPGGAKGADNLAESLSVKELLKEQVERDHYIGAICAAPKALAAHGIATGKTITSYPSFKDQLSATYTYSEERVVADGKIITSRGPGTSFEFALAIVETLKGKSARDSVAGPMLLSHQ* # ORIGINAL: g7204.t1 original gene structure, not modified by PASA NODE_1475_length_11064_cov_42.1805 AUGUSTUS gene 7721 8892 . + . ID=g7204;Name=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS mRNA 7721 8892 . + . ID=g7204.t1;Parent=g7204;Name=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 7721 8209 . + . ID=g7204.t1.exon1;Parent=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 7721 8209 . + 0 ID=cds.g7204.t1;Parent=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 8389 8613 . + . ID=g7204.t1.exon2;Parent=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 8389 8613 . + 0 ID=cds.g7204.t1;Parent=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS exon 8779 8892 . + . ID=g7204.t1.exon3;Parent=g7204.t1 NODE_1475_length_11064_cov_42.1805 AUGUSTUS CDS 8779 8892 . + 0 ID=cds.g7204.t1;Parent=g7204.t1 #PROT g7204.t1 g7204 MANVTATIIESVLGYPATPSTIPRRPMSLDSYLHIYTYLAPFLLCFYFTFTGLLYLWFFKLADQTKMHKIQPHYGRAKDRTWSNLWEECKWNIPSILIGSSFISFVIEAHFSGNALFFFKYDDYGVAYYAVSVLTMILFNDAWMYFWHRVMHTPKLKLMWIHRIHHRWSAPTPMVTMAFHPLEAVMQFCIITLTMVVPLHLPSLFVFGAILFTISVMEHCGYSFEVYEKLDKIIATPIHHDVHHSRPKVNFGVYLSVWDYLLGTSAEQNPSAKNE* # ORIGINAL: g11921.t1 original gene structure, not modified by PASA NODE_99_length_40620_cov_42.4113 AUGUSTUS gene 37532 39719 . - . ID=g11921;Name=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS mRNA 37532 39719 . - . ID=g11921.t1;Parent=g11921;Name=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 39597 39719 . - . ID=g11921.t1.exon1;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 39597 39719 . - 0 ID=cds.g11921.t1;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 39138 39272 . - . ID=g11921.t1.exon2;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 39138 39272 . - 0 ID=cds.g11921.t1;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 38545 38584 . - . ID=g11921.t1.exon3;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 38545 38584 . - 0 ID=cds.g11921.t1;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 38199 38383 . - . ID=g11921.t1.exon4;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 38199 38383 . - 2 ID=cds.g11921.t1;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 37532 37597 . - . ID=g11921.t1.exon5;Parent=g11921.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 37532 37597 . - 0 ID=cds.g11921.t1;Parent=g11921.t1 #PROT g11921.t1 g11921 MNPTADKEPLRYIGGADISFIKDNDVDACASLVVLEFPSLKVVYTSCRMVKLQLPYISGFLAFREVPFLLDLLDEIRHTNTEIYPQVIMVDGNGILHPRGFGVACHLGVLADIPTIGVGKTFLFVDGLSLDKIRSDHVPRLATGNVASVDLIGDSGAVWGAADIRSREYIRQLLARGDPIPD* # PASA_UPDATE: g11915.t1, single gene model update, valid-1, status:[pasa:asmbl_10278,status:3], valid-1 NODE_99_length_40620_cov_42.4113 . gene 7936 12374 . - . ID=g11915;Name=g11915.t1 NODE_99_length_40620_cov_42.4113 . mRNA 7936 12374 . - . ID=g11915.t1;Parent=g11915;Name=g11915.t1 NODE_99_length_40620_cov_42.4113 . five_prime_UTR 12306 12374 . - . ID=g11915.t1.utr5p1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 12149 12374 . - . ID=g11915.t1.exon1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 12149 12305 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 11694 11846 . - . ID=g11915.t1.exon2;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 11694 11846 . - 2 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 11395 11471 . - . ID=g11915.t1.exon3;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 11395 11471 . - 2 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 10840 11040 . - . ID=g11915.t1.exon4;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 10840 11040 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 10473 10550 . - . ID=g11915.t1.exon5;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 10473 10550 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 9944 10090 . - . ID=g11915.t1.exon6;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 9944 10090 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 9486 9674 . - . ID=g11915.t1.exon7;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 9486 9674 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 9175 9267 . - . ID=g11915.t1.exon8;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 9175 9267 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . exon 7936 8902 . - . ID=g11915.t1.exon9;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . CDS 8159 8902 . - 0 ID=cds.g11915.t1;Parent=g11915.t1 NODE_99_length_40620_cov_42.4113 . three_prime_UTR 7936 8158 . - . ID=g11915.t1.utr3p1;Parent=g11915.t1 #PROT g11915.t1 g11915 MLSRHISRGSPRLIGAALRRGFADAAAAKEAEYPTITTHPHVKPREKDPRWEGISMERAADQTDVLIVGGGPAGLSAAIRIKQIAAAKNQEVRVCVLEKAASIGSHTLSGAVVEPHALNELFPNWKEMGAPLNTPVTEDHFGFLTPTSRYPIPIMSWMPLNNHGNYIVRLGHFVKWLGEQAEALGVEIYPGYAASEIVYNDDGSVKGVATNDVGIAKDGSPKGNFERGMELHAKITLFGEGCHGSLSKGLIKKFNLRDGKEFQTYGIGIKELWEIDPAKHRPGNVEHTIGWPLDNHTYGGSFLYHLNDGPLVAVGFVIGLDYKNPYLNPFREFQRFKHHPTVSRTFEGGKRIGYGARAINEGGLQSVPKLAFPGGALMGCSAGFLNVPKIKGTHNAMKSGMITAEAVMDAFGGDEAAGKVTDSGALVLNNLDERIKGSWVYKELNAIRNVRPSFHTRLGNIGGLMLAGASMLVGGREPWTLKHNVPDHESLIPAKNAKPIEYPKPDGKISFDLLSSVALSGTNHNHDQPAHLTLRDDTIPVKNNLAVYDGPEQRFCPAGVYEFVPRENGLPPRLQINAQNCVHCKTCDIKDPSQNINWTVPEGGGGPAYDGM* # PASA_UPDATE: g11914.t1, single gene model update, valid-1, status:[pasa:asmbl_10276,status:12],[pasa:asmbl_10277,status:12], valid-1 NODE_99_length_40620_cov_42.4113 . gene 42 7241 . + . ID=g11914;Name=g11914.t1 NODE_99_length_40620_cov_42.4113 . mRNA 42 7241 . + . ID=g11914.t1;Parent=g11914;Name=g11914.t1 NODE_99_length_40620_cov_42.4113 . five_prime_UTR 42 42 . + . ID=g11914.t1.utr5p1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 42 370 . + . ID=g11914.t1.exon1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 43 370 . + 0 ID=cds.g11914.t1;Parent=g11914.t1;5_prime_partial=true NODE_99_length_40620_cov_42.4113 . exon 661 770 . + . ID=g11914.t1.exon2;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 661 770 . + 2 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 1011 1608 . + . ID=g11914.t1.exon3;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 1011 1608 . + 0 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 2151 2331 . + . ID=g11914.t1.exon4;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 2151 2331 . + 2 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 2726 2963 . + . ID=g11914.t1.exon5;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 2726 2963 . + 1 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 3341 4058 . + . ID=g11914.t1.exon6;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 3341 4058 . + 0 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 4332 4991 . + . ID=g11914.t1.exon7;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 4332 4991 . + 2 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 5168 6556 . + . ID=g11914.t1.exon8;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 5168 6556 . + 2 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . exon 6843 7241 . + . ID=g11914.t1.exon9;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . CDS 6843 7126 . + 2 ID=cds.g11914.t1;Parent=g11914.t1 NODE_99_length_40620_cov_42.4113 . three_prime_UTR 7127 7241 . + . ID=g11914.t1.utr3p1;Parent=g11914.t1 #PROT g11914.t1 g11914 RDDIDSVIAQGVLPASADTIVAYGLRLLHGRQYTVCLMTGNNLCSNGVTADFEAPVAGAVRDGVARGVDVDFTSALDHIGANWDAFDDIRRATDDAEFRSGIVGYAIAAGYYPGGTELFGFWNVGSSTFAVKSNVTLVTGRTYYVTVRATDLVGNIGYGYSNGITADATAPVSTSADAVLLDAVGVVGGVFILASNTEIVVRWPSIADDESGIAHCTVAVGSSPGMGDVVSALVVTDVDEVTIGPVTLHDGHDYHVSVVAFNGAGLSTVFHAPPFRVDASPPLPMMVSDGLSAEAEVDYQLSFDFAASWVPAVDHHSGIVRYECFLGSTSGGDDVAAAFSVGLATQCAVKRTVARGKRYYMGVRAYNGAGLHVVSVTDGIVVDDTPPVPGYVDSNAFTTVGFQSYLSLVPSWVGFDDPQSSISGYTCCAHLEGQDPSYCVDVGLSTHAVLSASNVPGFVLSGNRPIFITVFVQNGANLKARAVSQTGVLIDQSPPTAGAVRVCDTGVTCPPPPSTGRLFIRSRSAVLIEWDPFTDDGSRIVDYTWSVLGPTIGLANASPQSSRGLLFAVATSLSMSDGLTYTATVVATNAAGLDTSASRLFVCASSPPRRETAAQGPPVITGMSASVATVQWHAFRDDVLKAPEVLSCIVYVGSGCDQYDVSAVAQASMLRDSTWVVPVSLAGTSLAQMTASSLYVTVRCTNPAGLSSVTHSAKAAPAPVNSKEDRGGVVTVTSTVRGADAVQPHLCMASATWGGFKTASGAFVVRYSIGVRKDNANVYQGSTELQFDATLRPWENDNKELMTSVGTSTSAIATGLKLAANVQYAFVVRAYWSDGKYSEAFATFYTLTADATVSSSARVRPGMDPAKQLRYMSKSSVAAAVSWTPTPATFKNDAVKLECALGTAPGMDDLSSFRSISLTDTSCVFTDATLPEHRFFYASVRVLNAISKPRVLSTTGVLIDTTPPVTGIVLDGRGGVDVDVQGSASSLSASWHGFFDIESAVNSFYACWAGSACDCAPMGAAGVSVSTGRATTVTWDALSLVDGGRYRVRVVAVNGIGLASDSACSDGVTVDLSPPSASGAIAIHDVVASPSGGIAYTAEPGSVRASWVGAFSDALSGIASYSVAVGTSPGGMQIQGFLDVGTDTDIELENLDIGHGTTYYVMVAARDRAGHTVAAMSQGARVDRTPPLPPAAGVVGVATPHPTIANAVAITARWDAFTDAESGILSCEWALGRARGADTLQLFTPAQAASVGTVSPVAVPVPPVGVVNVHVTVQCTNGAGMRTSAHSQPIPVLAQNPLGGYIRVLGSASTAGVRFVASPTQSVQVHWGGFYDPLGRIALYHTELSMGGAVVQTVEDEVTERVLAAPKGAAHNSRYVISVWAMDAARNRISSTPLTATVTVDTTPPQNGFLRVEYLRASNQYRFTYSFDETEEPADSLTYDIALGTAQRASTLVSARVTGLTTYISNTQAAPPRPRTLFASVTATNGAGLTGYAQTTTVSDV* # PASA_UPDATE: g11917.t1, single gene model update, valid-1, status:[pasa:asmbl_10274,status:12],[pasa:asmbl_10275,status:13], valid-1 NODE_99_length_40620_cov_42.4113 . gene 16447 23199 . + . ID=g11917;Name=g11917.t1 NODE_99_length_40620_cov_42.4113 . mRNA 16447 23199 . + . ID=g11917.t1;Parent=g11917;Name=g11917.t1 NODE_99_length_40620_cov_42.4113 . exon 16447 18768 . + . ID=g11917.t1.exon1;Parent=g11917.t1 NODE_99_length_40620_cov_42.4113 . CDS 16447 18768 . + 0 ID=cds.g11917.t1;Parent=g11917.t1 NODE_99_length_40620_cov_42.4113 . exon 19011 23199 . + . ID=g11917.t1.exon2;Parent=g11917.t1 NODE_99_length_40620_cov_42.4113 . CDS 19011 22922 . + 0 ID=cds.g11917.t1;Parent=g11917.t1 NODE_99_length_40620_cov_42.4113 . three_prime_UTR 22923 23199 . + . ID=g11917.t1.utr3p1;Parent=g11917.t1 #PROT g11917.t1 g11917 MGCGASRPRVQNTDGPHPPGSATLPRRGSMLSRKGSLGSKLGSGSRDSVPLHLRPDFQIIRSDPLSKHNPPRAPEEERSLGTVGRIASSLSFEGRDYSHISRRILEDGGLRVYMAMPLVGMEAEREIFLNSFVPELRAMCNSRGFGFTIVDPHHGCAQFTWRSRLRVCMEEIDRCHVFVGLCGAKYGEIVDWTQIPEEDESSLLLSWISPELRDRSLSELEFRRGCIDSPVDRPALIMVRDGAYDKEMEELLESEGKRGDACRYRADLEDDVYHRNYLISDVHSTAMERPGGVFAYEYVHPEKCARLMHRFCRGFIKKLLPPASAQCSFAASADAMHDAHAISRLLFLVRDPTSIIDDSSSGRSSSAGHRKNVALIGEPGCGKASLLAGWIAIAERALHPDVDFANNEDGLPPGVVAFFHSCGCTPSAASLANLLRRLYCRLFGTDDVPWSEVGCDVESVQGLAALLPDWLSRASQVYDTIYIAIDGVDRLLNDPLPASAVHDLLWLPGRLPHNVHIAVSTSGGTTLRALEERMDFDIKMVPDLTDFEREDLIRRYLQQAYVGGCDPEELAPAISNALAPYPASTNPFYVRLAVSEAAALPGPIAEMAHRAVEIAEASADASLLADGFLARMENASGAASVSGIMSLMCVASEGLTEDDFLMVLGLDRWTVYLTLSTLKPLLVYAKGRWSPAHDSLRLAVYRRYMPTEEFVLTAHAQLARHFHRRWRERNVVTQVIAEMPQHHVAAGLWSDYTQLLTDDDFVSTKYPDGALSVQHIITQEHALAFHKILAYSSAIASLDLSRTSMDDATGQMIANAIAPGRLEALSLAFNRVGDGTALQLKLALAKPGCSLRRLVLRDNRLSPAGGAALADALSAEQSTLKALDVGWNALGDEGARSIAQALDKNSTLETLDVENNHITAVCAPHIATAVSNNKTLVHLYLGRNSLGDAGACQILGALRSHASMQVIDLERNGLGGRCVKDLCDVIRENRTLKHIMLAANDFENDNLAPIAKVIDEHPVTLERVDLRRNSGLTHPDRGCLGEQSARIILLSVPSRNITDNILASMSVGGVELPALLRSDSAPRVSLVAQMRRTSRSAVGGALKTLFLDNPLEHLLSPAPREQLAAGSDLPTEDSIVRSLRDRFAAHHLYAYAGSALVFMNPGMPVPTNDLTIEAYYRSKVPEGLSLPPHVFAIANRAYALASRRRKHQAIVFCGRSGSGKTENVRAIVNYLVRLASPGLLKPVPGGTVAALPLDKRMQQAFLLLEAFCNRRSQLNNNASQMATLYRLRIGPSGAIESARVEQHFFNPQCGGVGIGALGSIGGSTLLNSWADDPATDSSGFHVLYSLLYEADAQLRAQLNLSDTVSSTLDAFNVNTSETQRELTRALDALGFGLEERRGLFRAVAAVVLMGRLSFVPRNNARHSNNNNNASRSKKNSPGNGLYDSGYCGSSSNGHGANGDASMSASSHTNNTNNNNNTDPECARSGDSTPRGATSRRESTDGTSTPKENLPSIVVSNRSIAQSIAHLLGIESGDVLVTSILGAINAEDSDSDPVTDPAAGSSAASPPPPPTGGLASVKTAAELYASRATACVGALRSLLYERVVRALIMGINRGLSAGVVETTAELDSQPYIAVLDAPGQGMKRSSSIHDLFANAIGDGLQGLFDERCVRLETWFDREPNGGHQIDPNKARPQRPPPARLTPGGFLESVNRVFASSIAFGATANGTPDAGQDKRGSLKLIPLNNTTAATSSNTINGTTSFNVAVNANVVHESNDPIQALALLDEPGGLLDTIETWAGDGEAFATAIGRKLARHPGIRVVPNSTTDEFSVRHSCGTVEYDASDWAEQNVVDGLLNKLLARILSSSEHDFIRGALGDPRVSVSALRSSTDDALVDDNGGTKTTAPASLVGRLRKSTRALFHALRSMQVHFVHCVLPQRKDPRVFEPAEVIDQLRSSNVVAAVGAQRGGYPLSMTFEDFAKSIAVGPVAVISTPAHAPIMVATAAGMILVGNGTSNERGERFSLSGPSGNDITVPPPVTIMYNAEWVEEQLKMRKIEKTEYQIDSGRSVLRLRLSSPFFWA* # ORIGINAL: g11918.t1 original gene structure, not modified by PASA NODE_99_length_40620_cov_42.4113 AUGUSTUS gene 24431 31971 . + . ID=g11918;Name=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS mRNA 24431 31971 . + . ID=g11918.t1;Parent=g11918;Name=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 24431 29959 . + . ID=g11918.t1.exon1;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 24431 29959 . + 0 ID=cds.g11918.t1;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 30344 30580 . + . ID=g11918.t1.exon2;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 30344 30580 . + 0 ID=cds.g11918.t1;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 30859 30997 . + . ID=g11918.t1.exon3;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 30859 30997 . + 0 ID=cds.g11918.t1;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 31406 31971 . + . ID=g11918.t1.exon4;Parent=g11918.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 31406 31971 . + 2 ID=cds.g11918.t1;Parent=g11918.t1 #PROT g11918.t1 g11918 MGPFFQHSPRPVRTSPPHLVVLFFLGLVCVSAFVNFSHAVRNEDFPETLDATDARKQVYEQQQQQQQQQQQQQQEQHSHGQHRSERAAVTIVSLTWRKSTLGSLSLASSIIANITKRSDFKTALQSKAPIEYRISLAAGRYLLSDLMRGVNASVAQSLSVWPATVRIIGVGMLATSPTIILGCTAAGTATNVTLAKTLRVVNGSIIFEGVVFSRATGADGCEVNPIKSTLLTSYGVPPVGSRPADCDIDDCACIKRTSYRPWSIPLRALAVAGNATVIFKSVRVSGLAGLLDVDNGGVATISNSTFTNIDTTALGGGSINPLLLFPSYIDTSDYKVAFMRMVDAVRGSQYEGPPACSSSDDRITFTEFVRPTSDAGVGVAAIVRGGGKLTIDRTSFADIGSVFDLDDMARYWSERFVPPSGSLVYVAPAGVVSMQNVSFERVHMNPSMTLDGCERLTCFGYIGSVGTPGHLAPLIELAGYEPSFALPLTTYDDADAYGWSNPSLTPTKLPFYLVSDRDSIEPALCELVGPAVVTATQISVSEASTRAVFFVDSSRLDVKSSTVDTLLGSFVRVNGRGKPGVSAASASLRDVHVTHAPYAALWATAQEVEMESVGFFREPYTEFIASIDVSNSSFGESDAVDVRNAVLDLGLLYSPLASTPYIPSSYIDSYFGTGEMDLPAAYYICHPQDLRVALPSLYPEASAGNAPIVAFTVSSRARITIAKSSMAQLYSGAVARACGGSILFSDSVFDGVGDPDTNNVNADVFGTILYSTTPRCGLDTRMLHWSIAEFVDCSFTTNRGTAVVIASDTTLVDSEARGLMHPVQTVHFYRCSFSEFSSVAEPVMAYVGQGLSNSLEFTNCSFFSLAASPSPYDTWCLDPNYAYAYTRQSPALVGGVFVTHARLVLSDCALTNLTFLGALEGYLSEGGEQGRPVIGSLVNVGATSLNLNKQDFGIPELVNLCTDTFLDWNFAYGVENLTINYEPCFGDRGKVELVRTTVTNVDGGAALIIASGGGVVNLVNSTFANLRSVNGPVLAYIDPTARFFMDGSIVENATSDFFTLPERRRMDRQAWPPWTLLPAIGGAITVIPIRSAIQSPYTRLIKLRKALVKDRHYEQPQTVYIRGGAFRGLRGVGKMSAVISMAAPIQDGIFSQNTAALVTKYGVGITVDCGLGIARTLDNYDLTIDGTVFESIVSDITAIIDVRTKSTLALALCVQFVGIKNIASDRGGLISVTTPADVGVLLQSLRVSNVTSGGDGSVLYTSSPVTLDIHSMNVSRVSSGNGGLFRLVNRGDRSTAKLYDLNVQDVTAVTNGAFLSASGDYSVVVSNSSAIGVASVGGSGGVFHVDEDVKLVVDNMRVSRAMARNGGGFANVGGHATASFNCVASNNISTAGVGGMFAVGDQASVSISGGIFANSMAERSGGFAYAGGSGLLSLVGGVRVTNASSSVDGGCFFVDDSALLSVEDSSLSRCSAGMSPGSYGTGGVAYVRNAGGILSGAWKNVSVQASYAVIGEGIYLGYSATGSGLDAAVSGMSYTQPCSVEMSVDESVDGGAPRAASASAVVGIAPGGYLNQVRFLLKDCLNKSVVATPTQSVVVSLVLESVASLRGNLASACDDRGVTEANRKNGTGLVGTTVAAFIDSSSVVVPPGIIRVHGTPGDYVLCARSGNLLHTDDGLFSSAKMRVSLSPCSAGYQLVANAVSGLWECAEIPASPVESSGNLAVKVAPAVVCGTLALAVVCAMFVRWRMAVLRRKQSKETHEEFLSKHRSKMAELTAFEIPRSSLELLGVLGEGEFGIVHRARVLTREGRPKVVAAKLLKEGSSYDDRVKFVTEGDILRSLQHENVISLCAVLTAEEPVVLCIEYAQHGSALSLVRGIPQQRQGSDVVMAMLASFTRQIAAGMAFVAEMRVVHKDLALRNILISQDAFGEYVAKISDMGMASILASDVDTYTKKNRSRLPVRWMAPESLRQRIFSEKSDVYSYAVTIWELYSFGSIPHASLTNAEAVQHVIAGGRLEQPSHCPHTLFVQLLGMWQDDPTRRPKFSDVVMSLADTQFTGGWTSKQGGTGNYVDKFGLGAYDEEGLIGVEMVEVRHPYDGAIDFALEAPAHRHAKATYTLVADVQPYANVNASALRTVDAHGTQPYLELDRAAEFLDDMSE* # ORIGINAL: g11920.t1 original gene structure, not modified by PASA NODE_99_length_40620_cov_42.4113 AUGUSTUS gene 34332 36612 . + . ID=g11920;Name=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS mRNA 34332 36612 . + . ID=g11920.t1;Parent=g11920;Name=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 34332 34514 . + . ID=g11920.t1.exon1;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 34332 34514 . + 0 ID=cds.g11920.t1;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 34727 35131 . + . ID=g11920.t1.exon2;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 34727 35131 . + 0 ID=cds.g11920.t1;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 35401 35536 . + . ID=g11920.t1.exon3;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 35401 35536 . + 0 ID=cds.g11920.t1;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 35855 35984 . + . ID=g11920.t1.exon4;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 35855 35984 . + 2 ID=cds.g11920.t1;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 36267 36612 . + . ID=g11920.t1.exon5;Parent=g11920.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 36267 36612 . + 1 ID=cds.g11920.t1;Parent=g11920.t1 #PROT g11920.t1 g11920 MAISAHCGRILERIVTVGKWFPVALVCFLLAYSYYAYFIVIVLQAMQHAGSKALCAILYHALLFLVVSSYYRSCMTPPVGPPLEYQIPLHRLRLNDAGLPVASADPSISLPTCETTLSDGSYRYCFKCQLIKPDRTHHCGTCDRCVLKYDHHCPWINNCASWSNYKYFVLFLFHGSIFTTLLFATVAPIFVDYWSKSTNEYSESVALHIVIGFVLSLIFALPVWALFLFHAFLLANNRTTLESSQLPHFREKTRYANGFYLGVVENIKQVLGDQPSLWLLPVPTSAGNGASFPVVKEYEADTVRPLHSRSVVDLPDVVMFGLGERDSGGRASSPLSNRSASSSSGHTSRVNRGIIGRVGDRLRGAGPPNKTRAQEESTLLADDGLANSADSDDEANGAV* # PASA_UPDATE: g11916.t1, single gene model update, valid-1, status:[pasa:asmbl_10279,status:12], valid-1 NODE_99_length_40620_cov_42.4113 . gene 13041 13882 . - . ID=g11916;Name=g11916.t1 NODE_99_length_40620_cov_42.4113 . mRNA 13041 13882 . - . ID=g11916.t1;Parent=g11916;Name=g11916.t1 NODE_99_length_40620_cov_42.4113 . exon 13869 13882 . - . ID=g11916.t1.exon1;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . CDS 13869 13882 . - 0 ID=cds.g11916.t1;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . exon 13613 13670 . - . ID=g11916.t1.exon2;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . CDS 13613 13670 . - 1 ID=cds.g11916.t1;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . exon 13319 13436 . - . ID=g11916.t1.exon3;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . CDS 13319 13436 . - 0 ID=cds.g11916.t1;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . exon 13041 13174 . - . ID=g11916.t1.exon4;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . CDS 13146 13174 . - 2 ID=cds.g11916.t1;Parent=g11916.t1 NODE_99_length_40620_cov_42.4113 . three_prime_UTR 13041 13145 . - . ID=g11916.t1.utr3p1;Parent=g11916.t1 #PROT g11916.t1 g11916 MFIVNFISESSHHHILLSFLPLFKQPNTDKMADKVDTGAISGFDKSKLKKTSTQEKNTLPTKDTIAAEKTAK* # ORIGINAL: g11919.t1 original gene structure, not modified by PASA NODE_99_length_40620_cov_42.4113 AUGUSTUS gene 32554 33309 . - . ID=g11919;Name=g11919.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS mRNA 32554 33309 . - . ID=g11919.t1;Parent=g11919;Name=g11919.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS exon 32554 33309 . - . ID=g11919.t1.exon1;Parent=g11919.t1 NODE_99_length_40620_cov_42.4113 AUGUSTUS CDS 32554 33309 . - 0 ID=cds.g11919.t1;Parent=g11919.t1 #PROT g11919.t1 g11919 MKVEIAEFAEPFWGAPTCINDSREPNYMHTNYVAELVATTTCVPWLIVSGIGFAGSKGLPVRVAYALHFLSALFGVAYHATLGLAAQVLDRCSVMCWMICMLLFLIRLDKSNRLNHGSLRAASMVIASSVAVLSPLLSLHNLHVPVFVGIVAMMVFAGRPVARMYTAHAHMWEWALLLALPALLCFAMDEVTVVANLFDHWHSMWHAFALYSTAFFMGFVRSAQANRQGHTPCTAFMDLSMGLPIYSSSSK* # PASA_UPDATE: g2862.t1, single gene model update, valid-1, status:[pasa:asmbl_7365,status:12], valid-1 NODE_4496_length_1539_cov_74.3634_potentialcontaminant . gene 148 1539 . + . ID=g2862;Name=g2862.t1 NODE_4496_length_1539_cov_74.3634_potentialcontaminant . mRNA 148 1539 . + . ID=g2862.t1;Parent=g2862;Name=g2862.t1 NODE_4496_length_1539_cov_74.3634_potentialcontaminant . five_prime_UTR 148 179 . + . ID=g2862.t1.utr5p1;Parent=g2862.t1 NODE_4496_length_1539_cov_74.3634_potentialcontaminant . exon 148 1539 . + . ID=g2862.t1.exon1;Parent=g2862.t1 NODE_4496_length_1539_cov_74.3634_potentialcontaminant . CDS 180 1539 . + 0 ID=cds.g2862.t1;Parent=g2862.t1;3_prime_partial=true #PROT g2862.t1 g2862 MASVVSFSSLPLEIVVHHIAPFLGNVDLSSLSKVNSPLHTHLRHVRLFHLWPMYNRKYIEDVQFRDEVRATIPVDRLVLVAFDGDLQDLSAFKGVHSALFPKEGRTGSTCSASDLSPLKGVHTVELSFTSDSPDFLAPLADARAVCIREFHCSTRVPAFRKAKSVDICNGWLDLNDLIGIPRVRLVGGYTAPGTGIQDISSLRLARFVELRDVEKLKDLSCLENAREVVIHDCPRIVTLPPATYLRAFTWHRSPLTAIPPELGGLRFLDLSSSRDLEDVSAAGNVHELILHHCFSLKNVSALGSVHTLRISRIIAVLDVSALSGVHTLEFVDVDLVGVAKLAGVYYLSLSSVRFDVQEISQLGTVHTLSLPLVNIEDVSTLGGVHTLLFERNERIVDVSALGNCHRVELIGCPVSDVSMLGRVHTLNLESTNVSDVSMLGNVHTLNLRGCKKV # PASA_UPDATE: g2627.t1, single gene model update, valid-1, status:[pasa:asmbl_2114,status:3], valid-1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . gene 7534 9121 . + . ID=g2627;Name=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . mRNA 7534 9121 . + . ID=g2627.t1;Parent=g2627;Name=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . five_prime_UTR 7534 7650 . + . ID=g2627.t1.utr5p1;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . exon 7534 7726 . + . ID=g2627.t1.exon1;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . CDS 7651 7726 . + 0 ID=cds.g2627.t1;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . exon 8330 8616 . + . ID=g2627.t1.exon2;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . CDS 8330 8616 . + 2 ID=cds.g2627.t1;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . exon 8801 9121 . + . ID=g2627.t1.exon3;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . CDS 8801 8989 . + 0 ID=cds.g2627.t1;Parent=g2627.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant . three_prime_UTR 8990 9121 . + . ID=g2627.t1.utr3p1;Parent=g2627.t1 #PROT g2627.t1 g2627 MARTMLVAFVTFVAISMLTVSTQAGDVGSPSHTHGGVFGIICLALDELTGSVVSGAAELDRTFTCTTLTLAKATLLTCNGRYFIDNVGEAGNDISFAYDLGKTLDTAKYVVVKVSKNGAVKVAFATDSEGVNVVSTPLIELDGPTGGNPAVPGKVVPGITSLPSITCQASSQPYALEFPAPPP* # ORIGINAL: g2626.t1 original gene structure, not modified by PASA NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS gene 1833 5349 . - . ID=g2626;Name=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS mRNA 1833 5349 . - . ID=g2626.t1;Parent=g2626;Name=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 5324 5349 . - . ID=g2626.t1.exon1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 5324 5349 . - 0 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 4772 4843 . - . ID=g2626.t1.exon2;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 4772 4843 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 4414 4485 . - . ID=g2626.t1.exon3;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 4414 4485 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 4248 4319 . - . ID=g2626.t1.exon4;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 4248 4319 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 4076 4147 . - . ID=g2626.t1.exon5;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 4076 4147 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 3745 3816 . - . ID=g2626.t1.exon6;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 3745 3816 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 3582 3653 . - . ID=g2626.t1.exon7;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 3582 3653 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 3099 3165 . - . ID=g2626.t1.exon8;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 3099 3165 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 2848 2912 . - . ID=g2626.t1.exon9;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 2848 2912 . - 0 ID=cds.g2626.t1;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS exon 1833 2199 . - . ID=g2626.t1.exon10;Parent=g2626.t1 NODE_1601_length_10235_cov_44.0076_potentialcontaminant AUGUSTUS CDS 1833 2199 . - 1 ID=cds.g2626.t1;Parent=g2626.t1 #PROT g2626.t1 g2626 MAVPTEGSMYWTSQELTSIPSGVFDGLSGLKVLALTSNQIATLPSGIFDKLTALTTLYLGTNRIVTLPSGIFDKLTALTGLVLTSNQIATLPSGIFDKLTALTTLWLDSNQIAALPSGIFDKLTALTTLYLDSNQIATLPSGIFDKLTSLTWLRLESNQIATLPSGVFDGFSSPWVAVNLDSNPGNKGDLCYNSASRWTGAKCDVSCASDRLGANCSSTCECKNGAACSRFTGACTCTAGWTGADCSTRSPDGGSSDRSSSNNVVPIAAGISVAVFCVAIGTVCAIVYVRRNRQAPQSAMPMGAYVKLGASQSELDVI* # PASA_UPDATE: g3560.t1, single gene model update, valid-1, status:[pasa:asmbl_7187,status:3], valid-1 NODE_428_length_23909_cov_43.5814 . gene 98 2735 . + . ID=g3560;Name=g3560.t1 NODE_428_length_23909_cov_43.5814 . mRNA 98 2735 . + . ID=g3560.t1;Parent=g3560;Name=g3560.t1 NODE_428_length_23909_cov_43.5814 . five_prime_UTR 98 101 . + . ID=g3560.t1.utr5p1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . exon 98 245 . + . ID=g3560.t1.exon1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . CDS 102 245 . + 0 ID=cds.g3560.t1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . exon 492 647 . + . ID=g3560.t1.exon2;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . CDS 492 647 . + 0 ID=cds.g3560.t1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . exon 893 1023 . + . ID=g3560.t1.exon3;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . CDS 893 1023 . + 0 ID=cds.g3560.t1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . exon 1240 1372 . + . ID=g3560.t1.exon4;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . CDS 1240 1372 . + 1 ID=cds.g3560.t1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . exon 1638 2735 . + . ID=g3560.t1.exon5;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . CDS 1638 2279 . + 0 ID=cds.g3560.t1;Parent=g3560.t1 NODE_428_length_23909_cov_43.5814 . three_prime_UTR 2280 2735 . + . ID=g3560.t1.utr3p1;Parent=g3560.t1 #PROT g3560.t1 g3560 MMQNKNTLLPKFFGLYTYQSNIGRNIRFVVMNNLLPSRLKYHERYDLKGSTHNRKASDHEMKKKDPTFKDLDLIEKHAKGLRVADEVYKALTSLIQRDCRVLSSLKIMDYSMLVGIHKIDPIIHEAEIRSRLTKNADPNAATDFKNGLLAVTENNEWCLVFIGIIDILQQYKLKKKLEHTWKAFWYDGDTVSVVRPEFYSDRFQEFMRSSVFQPVRNPESIPIVPLPASVVAAGVAPVASIVQEHATVLNNIEFGQQSSLISGSHNAVAPTAFIAASPAPAHAGGHIPKSPQIGGHRASEGAASSEAKKAVVQEVVAEQTAKVVTIATPAYVVAVIEEKHSKPEIRIVSPDSGSNGLLSEVLTGLEATTSSAVAAASAEGAGKSDGHDAPRNSTGETSAAD* # PASA_UPDATE: g3562.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7180,status:12],[pasa:asmbl_7181,status:12],[pasa:asmbl_7182,status:12],[pasa:asmbl_7183,status:12],[pasa:asmbl_7184,status:12],[pasa:asmbl_7193,status:12], valid-1 # PASA_UPDATE: g3562.t1, single gene model update, valid-1, status:[pasa:asmbl_7192,status:12], valid-1 NODE_428_length_23909_cov_43.5814 . gene 4681 19866 . - . ID=g3562;Name=g3562.t1 NODE_428_length_23909_cov_43.5814 . mRNA 4681 19866 . - . ID=g3562.t1.1.5b6be70c;Parent=g3562;Name=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 19726 19866 . - . ID=g3562.t1.1.5b6be70c.exon1;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 19726 19866 . - 0 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 19067 19567 . - . ID=g3562.t1.1.5b6be70c.exon2;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 19067 19567 . - 0 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 17351 18952 . - . ID=g3562.t1.1.5b6be70c.exon3;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 17351 18952 . - 0 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 16750 17202 . - . ID=g3562.t1.1.5b6be70c.exon4;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 16750 17202 . - 0 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 5591 16608 . - . ID=g3562.t1.1.5b6be70c.exon5;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 5591 16608 . - 0 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 4681 5448 . - . ID=g3562.t1.1.5b6be70c.exon6;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 5238 5448 . - 1 ID=cds.g3562.t1.1.5b6be70c;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . three_prime_UTR 4681 5237 . - . ID=g3562.t1.1.5b6be70c.utr3p1;Parent=g3562.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . mRNA 4681 19866 . - . ID=g3562.t1;Parent=g3562;Name=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 19726 19866 . - . ID=g3562.t1.exon1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 19726 19866 . - 0 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 19067 19567 . - . ID=g3562.t1.exon2;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 19067 19567 . - 0 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 17351 18952 . - . ID=g3562.t1.exon3;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 17351 18952 . - 0 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 16750 17202 . - . ID=g3562.t1.exon4;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 16750 17202 . - 0 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 5591 16608 . - . ID=g3562.t1.exon5;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 5591 16608 . - 0 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 5242 5448 . - . ID=g3562.t1.exon6;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 5242 5448 . - 1 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . exon 4681 5121 . - . ID=g3562.t1.exon7;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . CDS 4872 5121 . - 1 ID=cds.g3562.t1;Parent=g3562.t1 NODE_428_length_23909_cov_43.5814 . three_prime_UTR 4681 4871 . - . ID=g3562.t1.utr3p1;Parent=g3562.t1 #PROT g3562.t1.1.5b6be70c g3562 MTEGESSTPDISPEGADAAAPETTAESTQEAPVVAADVDHSEPKGEESVSADAEGNTPAPQDAPALPSTSAPASPAPEAGDANARALSAKSSHVPEEAAVASTSRPVSRQTTAPAVDATEGATETKSVEKIAVDGVDASPAVVAKDVTPTPDSEAPSASAEAPAEHLDENGNAVATAIKSRPLSSLSVASVGSHHSDHVAATEEKDVPDSPEEQIAAISGLIALEGVTEAMWTDETKAEACTFFDSGDIMRLFLYTSFSERQEVNDEGDIVMLKDHRLHVTSAIPRETVKEVMYIIKEGARPLRVQEFDRRVQYGVIHGNAMESLMRIMNGIFVGFVLENETWPGGVKSEFCGQLHKFMAYLTDACHQTKGHTVLYVPREELGDVVVSARDKELVQRLELALIHWTRQIKEVVNTHDTAEIEESFGPLEEIAFWTYRSEDLSRINDQLKGEGVARVVAILSKAKSSYLESFVELSNKIQEGYAQAKNNLKFLSVLKRPCEELDAAGLKEIPTILPRLLNDIRFIWANSDFYHTKERLTALLRKVSNRIIGRCCSKISLDEMFNGDVEASIVTLQDSIRCAEEWKSVYANPSLNMKLEKHCGRKWEFDHSSIFAQIDAFVQRCRDLLDVCDGQIQFTFAAKGKKGQLPHFGGARGPSTLSSLGDIEASFQKHLQPLRGIKLKILDVKDTSWHDHYTAFKKNMKELEGHMQNVMASSFETSTSIEAMADLVEAFHHLAHREAIKQSVDKKINEVWTMFVQDLNVIKREFDSRKKKPEVLPIHPRFAGAAMWARAFLMRVRANMSLLQAKHYFMATIAAADAIVQQEQLTRALEEFINKAYLEWVATVNEVGSGNLSTRLESTLMARGKDTDNLEVHFDMDLNRLFVEVHYWEKLKFDIPYQVHDVLFRREELRVLREHVTLLVRDYNNALQSLDKEEKLLFRERIFFLDKKMRPGVTKYNWAAKGNQMGFIQTCRKHAADLQKMIDHWKAANRRIHHSCKLLGNTVLVEGLHVKNRVYSYEEFRDMQEHHRLVIKERLQSLHSDIQTTVEGMYETFRKDGKEVQRQWRNYLRKTDRLVENALRRTVKESLKELSRAINGDGKKHKDVPPMFNINLVLARQTVEFEPTIATLEEMVTGVVRSMIECISVVPNIRQGWAAEPKDPAAPAGSGATAAAAAAAEKDDQLTMYEIISREEDVKKIQAYISEGIGGISKALKDYLKTWDPYREIWEINKDAFIRRYAKLKPPLSTFDADINRYNEVANNVQKEETIVNIAFVSVDCGPLKYTLLSHCHAWQNKFTALLNEMAKTELDQLHAAFRHTREKLVAPPTSLDELSDSFDVLNRAKSELPSIEDRFGPVNEQYRILEKYEKQVSEDEQRKLESLGGAWAEFNDFLQMTERSLNSSGDEFKRELMQARDEFSRTVEQLRDEFANTAPFSANVPAESAFRSIGDFRHRIEEATSKERTISRGLALFKIDHVPSKDVMTIERDLDFLEKLWKLDEEWTVLWAGWKTMPFAVINVTNIEETLTKFQKRLQRLGREVKELSKVEWGTFTTLRGRVDQFKRTLPLIQDMKNPAIRDRHWGKLMEEIQKTFDPHSPDFTMEAIVGFGLDQYAELISELSGAASKELSIEQALQQIEEAWRQQTLDVVLYKTEYYRLRSTDDLFQLLEDNSVALSTMKASRYCKPFEKQLDHWERTLSLVMETVEMVLQVQRQWMYLENIFVGSEDIRKQLPAETGMFDIINDRWRRIVSGFHKNNGVLACTTQESLLSTLTEMNGSLERIQKMLDMYLEAKRQAFPRFYFLSNDDILEILGQSRNPEAVQQYLKKCFDNIRKLELKDPEHAGGKYWEAIGMHSADGEYVPFHEKVVIEGPVEQWLCAIEAAMRSTLRHLLLDCISSVRKTKRDKWVRDWAGQLLVTTSQIVWTADCTKALAAMKDDKGALKLQRKKQMSLLNKLSEMVRGDLNKIDRSKLVALITIEVHSRDVVDNMLKVRVSDPTAFEWLSQLRFYWEKEEENCVIRQTNTRSNYGYEYLGNGGRLVVTPLTDRCYVTLTMALSLFKGGAPQGPAGTGKTETVKDLGKAMANYVIVTNCSDGLDHKSMGRMFSGLAQTGAWGCFDEFNRINIEVLSVVAQQVSSIQTALKRAAPWFVFEGMEIRLKPSCGTFITMNPGYAGRTELPDNLKSMFRPVSMIVPDTSLIAEIILFADGFSNTRVLAKKADTLYKLCYQQLSKQDHYDFGLRALVSVLKSAGNKKRAEPDMNDETVLMISMRDMNQPKLASQDVPLFQGILSDLFPGVEAGVQDYGILRQAVEKELRGSGKQVTESTVLKVIQLYETKVVRHGVMIVGATGSGKSVVWKTLQSTLTRLRKENVDNGKYNAVRSFMINPKAVSMGELYGEFNAQTGEWYDGILSSVMRNVCGDDKPDEKWIVLDGPVDTLWIESMNTVLDDNKVLTLVNGERMALPSQVSLLFEVENLAVASPATVSRCGMIYMDFVDLGWLPYVETWLQQRQDGNERTNDVLRGLFEKYVQRTLNFRRSNCKELVPITDLNGVTSLCNLLDALIAHDESGIGPETQQDDGHARLVENWFIFAIIWSLGASVDADSRKRFDMFIREIEGQFPSKDTVYEYYVDAKKRAWTLWDDKIQGTYRFPPSTPFHKILVPTVDTVRNDFIIRALLTSGKRVLVVGDTGVGKTSVIQQALAQLDEAHYSVLNVNFSANVQSKRLQGIVESKIEKRTKDTFVPIGGKNLITFLDDFNMPSRDEYGSQPPLELLKHWMDYGFMYDREKCTVKYIRGMQILASMGPPGGGRNPISSRVQSRFNLINMTSPSEAQMKRIFSSLVNNTLQDFDEEIKPLGDVMTQATIDVYNTVSATLLPTPTKIHYLFNLRDVSRVFQGLMRASKDFYDTRESMAKLWLHECYRVFSDRLVDQQDREWFQQLMTNKLYNLFEINYSAICPDNLPPLFGDFMRRTVNPSVTATAAAAGVPAAAGAVGATGVAAGAAASDEFVYEDLHDLKAVKQFVHDKLEDYNMEPGNIQCDLVLFRDAIEHVSRIIRVVRQPRGNMLLIGVGGSGRQSLTRLAAYIVEYGVFSIEITKNYREQEFHEDLKNLYRRVGVECKPTVFLFSDTQIVHESFLEDVNNILSSGEVPNLFPPEEFAEIRESIRNDAIRDGVADSAQAMFAYFIERARANMHIVLCMSPVGKAFRNRIRMFPALVNCATIDWFSEWPRDALLEVALHYMSDVNLGTPEILKNVSETFVTAHASVVEMSRRMLFEVKRHNYVTPTNYLQLVKGYTELLTEKRAEFGSAANKLRGGLLKVDETKATVQSMSQDLEQTKKKVAQYQKQCEEYLVVLVQQKREADDQQRSVAARSEKLQKEEREVKVIADAAQTELDEALPALEMAKEALDNMDKKAIQEVKSYGKPPAHVEMVLEAVMVLFKAEPSWAEAKRQLADPTFIKRVIEYDKDNMSDRILQKIAKYCANPDFQPDVVGRVSKACKSLCMWVRAMEVYGRVLRQVAPKREKLAAAKQALETKQASLHEAEAKLAEVTEKMEELKRQYDEKLALKDKLRKEAEETEEKLGRAAKLVSGLSGERDRWEKSIASLEASISFLPGDCLVASAFLSYAGPFASNYRVQLVKDTWLAQVKRLEVPCNPNFDFALFLARPTDVRQWRISGLPSDDFSTENGVLVTRTRRWPLMVDPQAQANKWIKSMEGGNGLKVIDLSQSDYLRTLENAVQFGTPVLLQNILEEIDPALEPILNKSFIKQGNRLLIRLGDKEVEYNPEFRFYITTKLANPHYTPEISTKTTIVNFAVKERGLEDQLLGIVVRKEKPELEEQKDELVIGMAAGQKRLAELEDEILSLLSTAQGSLLDDEKLVLTLQSAKSTSEEVKEKMVISEQTEVKIDVAREGYRPCAQRASILFFVLNDMASVDPMYQFSLESYITAFNMSIDKSESSNDLKERISNINEYHTFAVYRGTCRGLFEQHKLLFSFQMCAKILAGAGKLNREEYEFFLRGGQVLDRDQQQLNPCRAWLSEAAWDNVTELEKLAAFNGIANSFEQSGRDWADWFQNPEPEAAALPIEWENKCDEMQRMLVLRSLRPDRVVFAARNFVVNNLGSRFVEPPTQDIGAVFEASTPESPIIFVLSSGVDPAKQLVELAQQCGISDRFHQLSLGEGQAPIATRLIRDGVLHGHWVFLANCHLSISWMPALDKIVENLRVNKPHKDFRLWLSSAPHPDFPISILQSSIKLTTEPPQGIKANLTRLYNLMTEPVFSKCSRPDKYKKLLFSLCFFHSVLLERRKFMSLGWNIPYGFNDSDFETCELITSIYLSEYDQTPWESLKYLIAEVSYGGRVTDDWDRRVLRVYINELYCDEALSRANYRLSPLQTYYIPDDGPLQSYKDYVQSLPTVDKPEAFGQHPNADIASQIKESNVLLDTLMALQPRVSVAGGETREDKVLAIVEDIESRLPEDLDYAATEHQVRDDPTPLNIVLIQEVARYNALLRTIRDSLVQLKKGVKGLVVMSAELEETMNCIHDARVPPLWGKTYPSLKPLAAWTRDLIQRTQQLADWSTSGSVPRVFWLSGFAFPTGFLTAVLQTTARKMSMSVDTLMWEFSVIQLEERDIKEYPSDGVYIRGLFLEGAG* #PROT g3562.t1 g3562 MTEGESSTPDISPEGADAAAPETTAESTQEAPVVAADVDHSEPKGEESVSADAEGNTPAPQDAPALPSTSAPASPAPEAGDANARALSAKSSHVPEEAAVASTSRPVSRQTTAPAVDATEGATETKSVEKIAVDGVDASPAVVAKDVTPTPDSEAPSASAEAPAEHLDENGNAVATAIKSRPLSSLSVASVGSHHSDHVAATEEKDVPDSPEEQIAAISGLIALEGVTEAMWTDETKAEACTFFDSGDIMRLFLYTSFSERQEVNDEGDIVMLKDHRLHVTSAIPRETVKEVMYIIKEGARPLRVQEFDRRVQYGVIHGNAMESLMRIMNGIFVGFVLENETWPGGVKSEFCGQLHKFMAYLTDACHQTKGHTVLYVPREELGDVVVSARDKELVQRLELALIHWTRQIKEVVNTHDTAEIEESFGPLEEIAFWTYRSEDLSRINDQLKGEGVARVVAILSKAKSSYLESFVELSNKIQEGYAQAKNNLKFLSVLKRPCEELDAAGLKEIPTILPRLLNDIRFIWANSDFYHTKERLTALLRKVSNRIIGRCCSKISLDEMFNGDVEASIVTLQDSIRCAEEWKSVYANPSLNMKLEKHCGRKWEFDHSSIFAQIDAFVQRCRDLLDVCDGQIQFTFAAKGKKGQLPHFGGARGPSTLSSLGDIEASFQKHLQPLRGIKLKILDVKDTSWHDHYTAFKKNMKELEGHMQNVMASSFETSTSIEAMADLVEAFHHLAHREAIKQSVDKKINEVWTMFVQDLNVIKREFDSRKKKPEVLPIHPRFAGAAMWARAFLMRVRANMSLLQAKHYFMATIAAADAIVQQEQLTRALEEFINKAYLEWVATVNEVGSGNLSTRLESTLMARGKDTDNLEVHFDMDLNRLFVEVHYWEKLKFDIPYQVHDVLFRREELRVLREHVTLLVRDYNNALQSLDKEEKLLFRERIFFLDKKMRPGVTKYNWAAKGNQMGFIQTCRKHAADLQKMIDHWKAANRRIHHSCKLLGNTVLVEGLHVKNRVYSYEEFRDMQEHHRLVIKERLQSLHSDIQTTVEGMYETFRKDGKEVQRQWRNYLRKTDRLVENALRRTVKESLKELSRAINGDGKKHKDVPPMFNINLVLARQTVEFEPTIATLEEMVTGVVRSMIECISVVPNIRQGWAAEPKDPAAPAGSGATAAAAAAAEKDDQLTMYEIISREEDVKKIQAYISEGIGGISKALKDYLKTWDPYREIWEINKDAFIRRYAKLKPPLSTFDADINRYNEVANNVQKEETIVNIAFVSVDCGPLKYTLLSHCHAWQNKFTALLNEMAKTELDQLHAAFRHTREKLVAPPTSLDELSDSFDVLNRAKSELPSIEDRFGPVNEQYRILEKYEKQVSEDEQRKLESLGGAWAEFNDFLQMTERSLNSSGDEFKRELMQARDEFSRTVEQLRDEFANTAPFSANVPAESAFRSIGDFRHRIEEATSKERTISRGLALFKIDHVPSKDVMTIERDLDFLEKLWKLDEEWTVLWAGWKTMPFAVINVTNIEETLTKFQKRLQRLGREVKELSKVEWGTFTTLRGRVDQFKRTLPLIQDMKNPAIRDRHWGKLMEEIQKTFDPHSPDFTMEAIVGFGLDQYAELISELSGAASKELSIEQALQQIEEAWRQQTLDVVLYKTEYYRLRSTDDLFQLLEDNSVALSTMKASRYCKPFEKQLDHWERTLSLVMETVEMVLQVQRQWMYLENIFVGSEDIRKQLPAETGMFDIINDRWRRIVSGFHKNNGVLACTTQESLLSTLTEMNGSLERIQKMLDMYLEAKRQAFPRFYFLSNDDILEILGQSRNPEAVQQYLKKCFDNIRKLELKDPEHAGGKYWEAIGMHSADGEYVPFHEKVVIEGPVEQWLCAIEAAMRSTLRHLLLDCISSVRKTKRDKWVRDWAGQLLVTTSQIVWTADCTKALAAMKDDKGALKLQRKKQMSLLNKLSEMVRGDLNKIDRSKLVALITIEVHSRDVVDNMLKVRVSDPTAFEWLSQLRFYWEKEEENCVIRQTNTRSNYGYEYLGNGGRLVVTPLTDRCYVTLTMALSLFKGGAPQGPAGTGKTETVKDLGKAMANYVIVTNCSDGLDHKSMGRMFSGLAQTGAWGCFDEFNRINIEVLSVVAQQVSSIQTALKRAAPWFVFEGMEIRLKPSCGTFITMNPGYAGRTELPDNLKSMFRPVSMIVPDTSLIAEIILFADGFSNTRVLAKKADTLYKLCYQQLSKQDHYDFGLRALVSVLKSAGNKKRAEPDMNDETVLMISMRDMNQPKLASQDVPLFQGILSDLFPGVEAGVQDYGILRQAVEKELRGSGKQVTESTVLKVIQLYETKVVRHGVMIVGATGSGKSVVWKTLQSTLTRLRKENVDNGKYNAVRSFMINPKAVSMGELYGEFNAQTGEWYDGILSSVMRNVCGDDKPDEKWIVLDGPVDTLWIESMNTVLDDNKVLTLVNGERMALPSQVSLLFEVENLAVASPATVSRCGMIYMDFVDLGWLPYVETWLQQRQDGNERTNDVLRGLFEKYVQRTLNFRRSNCKELVPITDLNGVTSLCNLLDALIAHDESGIGPETQQDDGHARLVENWFIFAIIWSLGASVDADSRKRFDMFIREIEGQFPSKDTVYEYYVDAKKRAWTLWDDKIQGTYRFPPSTPFHKILVPTVDTVRNDFIIRALLTSGKRVLVVGDTGVGKTSVIQQALAQLDEAHYSVLNVNFSANVQSKRLQGIVESKIEKRTKDTFVPIGGKNLITFLDDFNMPSRDEYGSQPPLELLKHWMDYGFMYDREKCTVKYIRGMQILASMGPPGGGRNPISSRVQSRFNLINMTSPSEAQMKRIFSSLVNNTLQDFDEEIKPLGDVMTQATIDVYNTVSATLLPTPTKIHYLFNLRDVSRVFQGLMRASKDFYDTRESMAKLWLHECYRVFSDRLVDQQDREWFQQLMTNKLYNLFEINYSAICPDNLPPLFGDFMRRTVNPSVTATAAAAGVPAAAGAVGATGVAAGAAASDEFVYEDLHDLKAVKQFVHDKLEDYNMEPGNIQCDLVLFRDAIEHVSRIIRVVRQPRGNMLLIGVGGSGRQSLTRLAAYIVEYGVFSIEITKNYREQEFHEDLKNLYRRVGVECKPTVFLFSDTQIVHESFLEDVNNILSSGEVPNLFPPEEFAEIRESIRNDAIRDGVADSAQAMFAYFIERARANMHIVLCMSPVGKAFRNRIRMFPALVNCATIDWFSEWPRDALLEVALHYMSDVNLGTPEILKNVSETFVTAHASVVEMSRRMLFEVKRHNYVTPTNYLQLVKGYTELLTEKRAEFGSAANKLRGGLLKVDETKATVQSMSQDLEQTKKKVAQYQKQCEEYLVVLVQQKREADDQQRSVAARSEKLQKEEREVKVIADAAQTELDEALPALEMAKEALDNMDKKAIQEVKSYGKPPAHVEMVLEAVMVLFKAEPSWAEAKRQLADPTFIKRVIEYDKDNMSDRILQKIAKYCANPDFQPDVVGRVSKACKSLCMWVRAMEVYGRVLRQVAPKREKLAAAKQALETKQASLHEAEAKLAEVTEKMEELKRQYDEKLALKDKLRKEAEETEEKLGRAAKLVSGLSGERDRWEKSIASLEASISFLPGDCLVASAFLSYAGPFASNYRVQLVKDTWLAQVKRLEVPCNPNFDFALFLARPTDVRQWRISGLPSDDFSTENGVLVTRTRRWPLMVDPQAQANKWIKSMEGGNGLKVIDLSQSDYLRTLENAVQFGTPVLLQNILEEIDPALEPILNKSFIKQGNRLLIRLGDKEVEYNPEFRFYITTKLANPHYTPEISTKTTIVNFAVKERGLEDQLLGIVVRKEKPELEEQKDELVIGMAAGQKRLAELEDEILSLLSTAQGSLLDDEKLVLTLQSAKSTSEEVKEKMVISEQTEVKIDVAREGYRPCAQRASILFFVLNDMASVDPMYQFSLESYITAFNMSIDKSESSNDLKERISNINEYHTFAVYRGTCRGLFEQHKLLFSFQMCAKILAGAGKLNREEYEFFLRGGQVLDRDQQQLNPCRAWLSEAAWDNVTELEKLAAFNGIANSFEQSGRDWADWFQNPEPEAAALPIEWENKCDEMQRMLVLRSLRPDRVVFAARNFVVNNLGSRFVEPPTQDIGAVFEASTPESPIIFVLSSGVDPAKQLVELAQQCGISDRFHQLSLGEGQAPIATRLIRDGVLHGHWVFLANCHLSISWMPALDKIVENLRVNKPHKDFRLWLSSAPHPDFPISILQSSIKLTTEPPQGIKANLTRLYNLMTEPVFSKCSRPDKYKKLLFSLCFFHSVLLERRKFMSLGWNIPYGFNDSDFETCELITSIYLSEYDQTPWESLKYLIAEVSYGGRVTDDWDRRVLRVYINELYCDEALSRANYRLSPLQTYYIPDDGPLQSYKDYVQSLPTVDKPEAFGQHPNADIASQIKESNVLLDTLMALQPRVSVAGGETREDKVLAIVEDIESRLPEDLDYAATEHQVRDDPTPLNIVLIQEVARYNALLRTIRDSLVQLKKGVKGLVVMSAELEETMNCIHDARVPPLWGKTYPSLKPLAAWTRDLIQRTQQLADWSTSGSVPRVFWLSGFAFPTGFLTAVLQTTARKMSMSVDTLMWEFSVIQLEERDIKEYPSDGVYIRGLFLEGAGWDRRALCLQDPKPMELVSSMPIVHFKPVENKKKTMKGVYACPLYMYPVRQGSFIIAVDLKSGAVEPEHWVKRGTALLLSLDV* # PASA_UPDATE: g3561.t1, single gene model update, valid-1, status:[pasa:asmbl_7191,status:3], valid-1 NODE_428_length_23909_cov_43.5814 . gene 2889 4215 . - . ID=g3561;Name=g3561.t1 NODE_428_length_23909_cov_43.5814 . mRNA 2889 4215 . - . ID=g3561.t1;Parent=g3561;Name=g3561.t1 NODE_428_length_23909_cov_43.5814 . five_prime_UTR 4146 4215 . - . ID=g3561.t1.utr5p1;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . exon 3763 4215 . - . ID=g3561.t1.exon1;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . CDS 3763 4145 . - 0 ID=cds.g3561.t1;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . exon 3522 3654 . - . ID=g3561.t1.exon2;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . CDS 3522 3654 . - 1 ID=cds.g3561.t1;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . exon 2889 3324 . - . ID=g3561.t1.exon3;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . CDS 3226 3324 . - 0 ID=cds.g3561.t1;Parent=g3561.t1 NODE_428_length_23909_cov_43.5814 . three_prime_UTR 2889 3225 . - . ID=g3561.t1.utr3p1;Parent=g3561.t1 #PROT g3561.t1 g3561 MAPETESRSSALTYKQTPAQHAYPRSLNGNGLIMVSHPHRSASSWSAPTKVPVKLHELLLIRSCDSSLSAESCLSSAPSFKITSDIVPILCMSNIEEMRQCGDDFFSDTVLAYFDQCFTSFEALRVHFENGNFEEISRTAHYLKGSAGTLGLQRLQCVLTELQVCCTPGPSQDLQRSRLMYGKLKGVYDATSNAVRESFGICRA* # PASA_UPDATE: g3563.t1, single gene model update, valid-1, status:[pasa:asmbl_7188,status:12], valid-1 # PASA_UPDATE: g3563.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7189,status:12], valid-1 NODE_428_length_23909_cov_43.5814 . gene 20426 22943 . + . ID=g3563;Name=g3563.t1 NODE_428_length_23909_cov_43.5814 . mRNA 20426 22526 . + . ID=g3563.t1;Parent=g3563;Name=g3563.t1 NODE_428_length_23909_cov_43.5814 . five_prime_UTR 20426 20462 . + . ID=g3563.t1.utr5p1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . exon 20426 21163 . + . ID=g3563.t1.exon1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . CDS 20463 21163 . + 0 ID=cds.g3563.t1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . exon 21294 22013 . + . ID=g3563.t1.exon2;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . CDS 21294 22013 . + 1 ID=cds.g3563.t1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . exon 22126 22214 . + . ID=g3563.t1.exon3;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . CDS 22126 22214 . + 1 ID=cds.g3563.t1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . exon 22366 22526 . + . ID=g3563.t1.exon4;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . CDS 22366 22526 . + 2 ID=cds.g3563.t1;Parent=g3563.t1 NODE_428_length_23909_cov_43.5814 . mRNA 20426 22943 . + . ID=g3563.t1.1.5b6be70c;Parent=g3563;Name=g3563.t1 NODE_428_length_23909_cov_43.5814 . five_prime_UTR 20426 20462 . + . ID=g3563.t1.1.5b6be70c.utr5p1;Parent=g3563.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 20426 21163 . + . ID=g3563.t1.1.5b6be70c.exon1;Parent=g3563.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 20463 21163 . + 0 ID=cds.g3563.t1.1.5b6be70c;Parent=g3563.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . exon 21294 22943 . + . ID=g3563.t1.1.5b6be70c.exon2;Parent=g3563.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . CDS 21294 22017 . + 1 ID=cds.g3563.t1.1.5b6be70c;Parent=g3563.t1.1.5b6be70c NODE_428_length_23909_cov_43.5814 . three_prime_UTR 22018 22943 . + . ID=g3563.t1.1.5b6be70c.utr3p1;Parent=g3563.t1.1.5b6be70c #PROT g3563.t1 g3563 MRKSAGAKKASVDAQPLLTDVFATRKHHRGQDDLARTKPAKRPAFSPKDPKDPRSTIATAAQDDDSPQPLVDRGDAVADLSIDTQSAVSPESTHPAHGANKKGVEVVVETTYSIQDTYGQPNGEFIEGEKVTNVPPATDTDDLTVILPGKVDAPIAANSPAQKPSPDNAISPDVTIEDADEVEISDALVKNAVLPESYRLLGQQFYALETVMAQRKTKSRFEQIRSDVERISKRVFGVTQLAQIKTVLPSAYNVTLVEAAAHVPFGMAGKREHALWVQATDSLPVHLVARQTAFRRSLVALIAKEHRSFLASLNLPIDRASLANMSQWHPLFKVERMRPIAAADLPLPPQPLVMTSALAVELMKKNVQTAARDRKGPAASSLVHTGVEGSALSLGELRREGDVVDLSSPIVASAPLPGSPQSGFGMGISGDLLARVRAKENRNSQLFDVDESPEQKQRRLLLRMLSSTADVLRSFYSSSKRSTCPVESVVSCVVRSSSTPVSPDSVMSQLELASQIAPDACSLYFVDKCRYFRLANYGTLKARVLEEIGKLRLNEL* #PROT g3563.t1.1.5b6be70c g3563 MRKSAGAKKASVDAQPLLTDVFATRKHHRGQDDLARTKPAKRPAFSPKDPKDPRSTIATAAQDDDSPQPLVDRGDAVADLSIDTQSAVSPESTHPAHGANKKGVEVVVETTYSIQDTYGQPNGEFIEGEKVTNVPPATDTDDLTVILPGKVDAPIAANSPAQKPSPDNAISPDVTIEDADEVEISDALVKNAVLPESYRLLGQQFYALETVMAQRKTKSRFEQIRSDVERISKRVFGVTQLAQIKTVLPSAYNVTLVEAAAHVPFGMAGKREHALWVQATDSLPVHLVARQTAFRRSLVALIAKEHRSFLASLNLPIDRASLANMSQWHPLFKVERMRPIAAADLPLPPQPLVMTSALAVELMKKNVQTAARDRKGPAASSLVHTGVEGSALSLGELRREGDVVDLSSPIVASAPLPGSPQSGFGMGISGDLLARVRAKENRNSQLFDVDESPEQKQRRLLLRMLSSTADVLRS* # ORIGINAL: g3830.t1 original gene structure, not modified by PASA NODE_2442_length_6258_cov_45.5746 AUGUSTUS gene 2778 5734 . - . ID=g3830;Name=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS mRNA 2778 5734 . - . ID=g3830.t1;Parent=g3830;Name=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 5513 5734 . - . ID=g3830.t1.exon1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 5513 5734 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 5210 5329 . - . ID=g3830.t1.exon2;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 5210 5329 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 4689 4811 . - . ID=g3830.t1.exon3;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 4689 4811 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 4390 4538 . - . ID=g3830.t1.exon4;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 4390 4538 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 4010 4121 . - . ID=g3830.t1.exon5;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 4010 4121 . - 1 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 3706 3814 . - . ID=g3830.t1.exon6;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 3706 3814 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 3178 3290 . - . ID=g3830.t1.exon7;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 3178 3290 . - 2 ID=cds.g3830.t1;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS exon 2778 3047 . - . ID=g3830.t1.exon8;Parent=g3830.t1 NODE_2442_length_6258_cov_45.5746 AUGUSTUS CDS 2778 3047 . - 0 ID=cds.g3830.t1;Parent=g3830.t1 #PROT g3830.t1 g3830 MEESMIRMDGAHAEVYLRAGESVCVPFAFRSMRHGRIYRWPRVGDPAPVGEATESCWQRVGSAAETPIEARSIKISFLNKGMKPVAVVHVVVDPIPFVVDQTFRFFNAENQILKRLVRIPANRFRHATLSSVHTTSPKFFLACSDRNVVCEASNEDDPSEPQDVFLKYGCGSSPSVACFYILLYSDPFGASLEEVWRFYVHSLQRVDVTASLGQLSRASLVLRGTHASRSVQCFSSHPKELTVIPEKPFVLLANALNEVRVSLKPRTIGTMEAFVNVVDVEFSQLLQMWLVTATVLAPVVTKRFEVTMAVGKSANKRLSYYNPYPTAKRFYLDTNRPEIVRFKDNVLDIAPGDSEFIGLRFVPQQRTSVTEAFVFINDEEERNEECFCVRVFYTAEPSHLAAVVS* # ORIGINAL: g293.t1 original gene structure, not modified by PASA NODE_2811_length_5075_cov_45.0388 AUGUSTUS gene 3558 4785 . - . ID=g293;Name=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS mRNA 3558 4785 . - . ID=g293.t1;Parent=g293;Name=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 4723 4785 . - . ID=g293.t1.exon1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 4723 4785 . - 0 ID=cds.g293.t1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 4497 4587 . - . ID=g293.t1.exon2;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 4497 4587 . - 0 ID=cds.g293.t1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 4254 4384 . - . ID=g293.t1.exon3;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 4254 4384 . - 2 ID=cds.g293.t1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 4108 4168 . - . ID=g293.t1.exon4;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 4108 4168 . - 0 ID=cds.g293.t1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 3864 3982 . - . ID=g293.t1.exon5;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 3864 3982 . - 2 ID=cds.g293.t1;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS exon 3558 3779 . - . ID=g293.t1.exon6;Parent=g293.t1 NODE_2811_length_5075_cov_45.0388 AUGUSTUS CDS 3558 3779 . - 0 ID=cds.g293.t1;Parent=g293.t1 #PROT g293.t1 g293 MVGSGRSKTLMRDICESAIVVLSSVVQPFVYKLQSGMPAPVKTPALEYGQRGIFEYYIASLAWLSGYPELHGRFGRSLNEFGNAFGFAAMLDSARVSNYSSAAMFSLPFYRGAWEELQRDGVDILASDGTWLRRTKVASVQLFDKLSASDLSRTEESRPTDSLRAMVSSLFSAEHKVELNRHSYLSELKIAVTALRSALFGESHNSALFAELWSALEFIFLLPSPGER* # PASA_UPDATE: g292.t1, single gene model update, valid-1, status:[pasa:asmbl_5066,status:3], valid-1 # PASA_UPDATE: g292.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5067,status:3], valid-1 NODE_2811_length_5075_cov_45.0388 . gene 86 2018 . + . ID=g292;Name=g292.t1 NODE_2811_length_5075_cov_45.0388 . mRNA 86 2018 . + . ID=g292.t1;Parent=g292;Name=g292.t1 NODE_2811_length_5075_cov_45.0388 . five_prime_UTR 86 266 . + . ID=g292.t1.utr5p1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . exon 86 348 . + . ID=g292.t1.exon1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . CDS 267 348 . + 0 ID=cds.g292.t1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . exon 458 561 . + . ID=g292.t1.exon2;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . CDS 458 561 . + 2 ID=cds.g292.t1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . exon 1369 1567 . + . ID=g292.t1.exon3;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . CDS 1369 1567 . + 0 ID=cds.g292.t1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . exon 1675 2018 . + . ID=g292.t1.exon4;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . CDS 1675 1817 . + 2 ID=cds.g292.t1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . three_prime_UTR 1818 2018 . + . ID=g292.t1.utr3p1;Parent=g292.t1 NODE_2811_length_5075_cov_45.0388 . mRNA 86 2018 . + . ID=g292.t1.1.5b6be70b;Parent=g292;Name=g292.t1 NODE_2811_length_5075_cov_45.0388 . five_prime_UTR 86 266 . + . ID=g292.t1.1.5b6be70b.utr5p1;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . exon 86 348 . + . ID=g292.t1.1.5b6be70b.exon1;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . CDS 267 348 . + 0 ID=cds.g292.t1.1.5b6be70b;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . exon 458 561 . + . ID=g292.t1.1.5b6be70b.exon2;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . CDS 458 561 . + 2 ID=cds.g292.t1.1.5b6be70b;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . exon 1369 2018 . + . ID=g292.t1.1.5b6be70b.exon3;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . CDS 1369 1620 . + 0 ID=cds.g292.t1.1.5b6be70b;Parent=g292.t1.1.5b6be70b NODE_2811_length_5075_cov_45.0388 . three_prime_UTR 1621 2018 . + . ID=g292.t1.1.5b6be70b.utr3p1;Parent=g292.t1.1.5b6be70b #PROT g292.t1 g292 MGAALKKLFGSKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDSADRDRIDEARQELHRIVNDREMRDAVILIFANKQDMDTAMKPQEITEKLGLQRIHDRNWFVQPSCATSGDGLYEGLTWLTSNQKQ* #PROT g292.t1.1.5b6be70b g292 MGAALKKLFGSKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDSADRDRIDEARQELHRIVNDREMRDAVILIFANKQDMDTGWLFALAHSCRIVRLMV* # PASA_UPDATE: g4876.t1, single gene model update, valid-1, status:[pasa:asmbl_7292,status:12], valid-1 NODE_4407_length_1662_cov_59.9786 . gene 1 1636 . - . ID=g4876;Name=g4876.t1 NODE_4407_length_1662_cov_59.9786 . mRNA 1 1636 . - . ID=g4876.t1;Parent=g4876;Name=g4876.t1 NODE_4407_length_1662_cov_59.9786 . exon 1 1636 . - . ID=g4876.t1.exon1;Parent=g4876.t1 NODE_4407_length_1662_cov_59.9786 . CDS 1 1636 . - 0 ID=cds.g4876.t1;Parent=g4876.t1;3_prime_partial=true #PROT g4876.t1 g4876 MIRDNALQRIDHVVTHEAIVQMYFAANPDGLNVTLGQRIIINDVARCVPPCVHGSCAVNLTCVCEGGWSGIDCNVTLVIPIDICDLHRVSGRILLRTHGAIDDFSAAVGVITLFSVLFAAEVLCVPYFTHRFARVVRTSRSRSNDIVRTARLNRANVIRLMLLALQGVQIHAIVLNVELSDMFVESNGKVFSSISISAFASSFFWYFWVVMAVTLLWLVYAWAYMLDGGVFLRKTAVGRVFLFPADQFLQLWVSAGFIPTLLNGMRAFHCWYLDDATAFMATDGVCSVPCWTGEHWAYIAVSFVTLLVYYPLATISALLWQDLDADQEVRNAPHAFIVEPLIKVALVVMRVYFTSSPVAYLSIVAVICAATAVYHWRWAPCYVAWVNTPMALAYMSAFGTAFVLLIGVVTDRSDAFFAVPAIWVAAAAGGLVYLRWMYPDDLVRRSLKEADTQASEMLMAMKKVFRRRSTNSLQLRAGAPIAWDAAAASDDSNSRTAGDSRSNADNQRERSGHAFWKPRAVSFGDAAAQSRKTVDESVAAGTLDP # PASA_UPDATE: g12196.t1, single gene model update, valid-1, status:[pasa:asmbl_37,status:12], valid-1 NODE_1010_length_14754_cov_46.4722 . gene 138 1410 . + . ID=g12196;Name=g12196.t1 NODE_1010_length_14754_cov_46.4722 . mRNA 138 1410 . + . ID=g12196.t1;Parent=g12196;Name=g12196.t1 NODE_1010_length_14754_cov_46.4722 . exon 138 280 . + . ID=g12196.t1.exon1;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . CDS 138 280 . + 0 ID=cds.g12196.t1;Parent=g12196.t1;5_prime_partial=true NODE_1010_length_14754_cov_46.4722 . exon 527 625 . + . ID=g12196.t1.exon2;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . CDS 527 625 . + 1 ID=cds.g12196.t1;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . exon 739 835 . + . ID=g12196.t1.exon3;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . CDS 739 835 . + 1 ID=cds.g12196.t1;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . exon 1143 1410 . + . ID=g12196.t1.exon4;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . CDS 1143 1208 . + 0 ID=cds.g12196.t1;Parent=g12196.t1 NODE_1010_length_14754_cov_46.4722 . three_prime_UTR 1209 1410 . + . ID=g12196.t1.utr3p1;Parent=g12196.t1 #PROT g12196.t1 g12196 NSGIEKAFLFDVVSKIYIATDSSPVDMQSYELSSDMIDVVIDVSCIYGMKDDVECIAYDKASASIIKLNNGMVLYLREVNRYLALVCLLREENFEKHGLIDYNFHCFRQAIQEVFEVRRKSLGHGIAAGKQPAL* # PASA_UPDATE: g12198.t1, single gene model update, valid-1, status:[pasa:asmbl_34,status:12],[pasa:asmbl_36,status:12], valid-1 NODE_1010_length_14754_cov_46.4722 . gene 6045 8094 . - . ID=g12198;Name=g12198.t1 NODE_1010_length_14754_cov_46.4722 . mRNA 6045 8094 . - . ID=g12198.t1;Parent=g12198;Name=g12198.t1 NODE_1010_length_14754_cov_46.4722 . five_prime_UTR 8032 8094 . - . ID=g12198.t1.utr5p1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . exon 7942 8094 . - . ID=g12198.t1.exon1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . CDS 7942 8031 . - 0 ID=cds.g12198.t1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . exon 7804 7837 . - . ID=g12198.t1.exon2;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . CDS 7804 7837 . - 0 ID=cds.g12198.t1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . exon 7171 7683 . - . ID=g12198.t1.exon3;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . CDS 7171 7683 . - 2 ID=cds.g12198.t1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . exon 6045 7049 . - . ID=g12198.t1.exon4;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . CDS 6292 7049 . - 2 ID=cds.g12198.t1;Parent=g12198.t1 NODE_1010_length_14754_cov_46.4722 . three_prime_UTR 6045 6291 . - . ID=g12198.t1.utr3p1;Parent=g12198.t1 #PROT g12198.t1 g12198 MKTSLIFLLVGLLAVSCVVPTQGLLKGPHKRSASTKDNNEFESNDSVGKSGMDSYVTEGEEGGRDMDGRTQEEAVQEAELEAEEKHESAKQAELAELAEEEAEAASDAAEMAVVKAEEAEEAVEDAEEAADAAEAALKDAESAEEAEVAEEGAEEAEEAMEDAKEEAAIMKAEAAVLIAVATAEKALAEAAEATAEKAAAAEAAEAEDNVDSDNDNYGAQEGYDGFDADGGSAETDSGPDSYSGMDDDSNYGDDNVLMDGPDEDDVADDDLPMDGDDDDLAMDGDDDDLPMDGDDDDLPMDGDDDDLPIDGDDDDLPMAGDDDDLPMDPTEVNHVPPVDETDMDGVPPPPHHGPHHHGPHDSLLGNHGGPCGWMSHVHGLRFMRNWPKAARIAFLAGIGAIGLLLVGAVARCLVLHCRRRKDSTTTVLPTYDTLYGKNTRAHLGYLPVPTSETDKSAVVVFATA* # PASA_UPDATE: g12197.t1, single gene model update, valid-1, status:[pasa:asmbl_39,status:12],[pasa:asmbl_40,status:12], valid-1 # PASA_UPDATE: g12197.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_38,status:12], valid-1 NODE_1010_length_14754_cov_46.4722 . gene 1702 5801 . + . ID=g12197;Name=g12197.t1 NODE_1010_length_14754_cov_46.4722 . mRNA 1702 5801 . + . ID=g12197.t1;Parent=g12197;Name=g12197.t1 NODE_1010_length_14754_cov_46.4722 . five_prime_UTR 1702 1958 . + . ID=g12197.t1.utr5p1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 1702 1962 . + . ID=g12197.t1.exon1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 1959 1962 . + 0 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 2533 2841 . + . ID=g12197.t1.exon2;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 2533 2841 . + 2 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 3039 3427 . + . ID=g12197.t1.exon3;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 3039 3427 . + 2 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 3704 3743 . + . ID=g12197.t1.exon4;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 3704 3743 . + 0 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 3929 4989 . + . ID=g12197.t1.exon5;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 3929 4989 . + 2 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 5180 5257 . + . ID=g12197.t1.exon6;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 5180 5257 . + 0 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . exon 5436 5801 . + . ID=g12197.t1.exon7;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . CDS 5436 5717 . + 0 ID=cds.g12197.t1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . three_prime_UTR 5718 5801 . + . ID=g12197.t1.utr3p1;Parent=g12197.t1 NODE_1010_length_14754_cov_46.4722 . mRNA 1702 5717 . + . ID=g12197.t1.1.5b6be70a;Parent=g12197;Name=g12197.t1 NODE_1010_length_14754_cov_46.4722 . five_prime_UTR 1702 2162 . + . ID=g12197.t1.1.5b6be70a.utr5p1;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 1702 2841 . + . ID=g12197.t1.1.5b6be70a.exon1;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 2163 2841 . + 0 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 3039 3427 . + . ID=g12197.t1.1.5b6be70a.exon2;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 3039 3427 . + 2 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 3704 3743 . + . ID=g12197.t1.1.5b6be70a.exon3;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 3704 3743 . + 0 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 3929 4989 . + . ID=g12197.t1.1.5b6be70a.exon4;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 3929 4989 . + 2 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 5180 5257 . + . ID=g12197.t1.1.5b6be70a.exon5;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 5180 5257 . + 0 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . exon 5436 5717 . + . ID=g12197.t1.1.5b6be70a.exon6;Parent=g12197.t1.1.5b6be70a NODE_1010_length_14754_cov_46.4722 . CDS 5436 5717 . + 0 ID=cds.g12197.t1.1.5b6be70a;Parent=g12197.t1.1.5b6be70a #PROT g12197.t1 g12197 MAILRAKADFSYDAENDDELSFQANDVIVVVAKIDEGWWEGELNGRRGIFPANFVQPIVETAPTPAPADNPPARERTNTNTAAAAGFVRAGSVSKAAVPLPVAKGVANARKRARVVHSFMAEQPDEIDLEPGSFVEIEREVAEGWWEGSVNGKKGLFPSNFVAMVVDGEDDTPSSAPAKAPEPAKAPEPEPEQVTEMKPKKVMGVGFGNILGGAKLKSVGGPTSAAAPAEQKEEAQPAYALPIRKKTGEKRMKATFDYTAENPDELTFSVGDIISNVTSVGEGWAQGELGGKGGLFPSNFAEPIPDDESDTKKKGPAPMPPTEKRAVLPPTATPTPAPAPAPAAEPKKAPPIPGKTGAASAASAKAAPEPDSAPVQAAKPIGFRLPMPGPATAGKGPAPAVPAKKEEAAPTPATVTPAAAPAPAAKPSAGPVAAKQPPPTVRPKPAEDASGSAAGATPWGMKLRASVVPKMDEKTEDDVKKAAPPGRPPAPSAAPKPTAGAIAAATEERPAVLKRFGSEEKAPPPVVRAKPSAAASASASAPVAPAIVSIKADDDDSKTAPEGDAASQVRLHHATLDRPKKARGSRLPNRASRLFDSEEHEDVKAAPTPAPVAAPVAAAAPKPVEKKEEPAQPSSFLRDRTASSSVASGRKPGASSLLSPDGGSQPSTASSEEVSALRKELSELRVLFQSEIGALQRELRFEREERAKIKAEIEELQRHG* #PROT g12197.t1.1.5b6be70a g12197 MEIRQRFVCSPCDVFLHGQTHRSALLWLFVNAVAYHSLFCVHFCLLSASSCDVCMHGLVCVCACACCALHVCLYVCICMRVCIVCVCLSVCVCVCLCACACVRVCVCVRVCVCVCVSPHIPFAAILRAKADFSYDAENDDELSFQANDVIVVVAKIDEGWWEGELNGRRGIFPANFVQPIVETAPTPAPADNPPARERTNTNTAAAAGFVRAGSVSKAAVPLPVAKGVANARKRARVVHSFMAEQPDEIDLEPGSFVEIEREVAEGWWEGSVNGKKGLFPSNFVAMVVDGEDDTPSSAPAKAPEPAKAPEPEPEQVTEMKPKKVMGVGFGNILGGAKLKSVGGPTSAAAPAEQKEEAQPAYALPIRKKTGEKRMKATFDYTAENPDELTFSVGDIISNVTSVGEGWAQGELGGKGGLFPSNFAEPIPDDESDTKKKGPAPMPPTEKRAVLPPTATPTPAPAPAPAAEPKKAPPIPGKTGAASAASAKAAPEPDSAPVQAAKPIGFRLPMPGPATAGKGPAPAVPAKKEEAAPTPATVTPAAAPAPAAKPSAGPVAAKQPPPTVRPKPAEDASGSAAGATPWGMKLRASVVPKMDEKTEDDVKKAAPPGRPPAPSAAPKPTAGAIAAATEERPAVLKRFGSEEKAPPPVVRAKPSAAASASASAPVAPAIVSIKADDDDSKTAPEGDAASQVRLHHATLDRPKKARGSRLPNRASRLFDSEEHEDVKAAPTPAPVAAPVAAAAPKPVEKKEEPAQPSSFLRDRTASSSVASGRKPGASSLLSPDGGSQPSTASSEEVSALRKELSELRVLFQSEIGALQRELRFEREERAKIKAEIEELQRHG* # ORIGINAL: g12200.t1 original gene structure, not modified by PASA NODE_1010_length_14754_cov_46.4722 AUGUSTUS gene 12138 14754 . + . ID=g12200;Name=g12200.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS mRNA 12138 14754 . + . ID=g12200.t1;Parent=g12200;Name=g12200.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 12138 14754 . + . ID=g12200.t1.exon1;Parent=g12200.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 12138 14754 . + 0 ID=cds.g12200.t1;Parent=g12200.t1 #PROT g12200.t1 g12200 MEGKGGATARGGIAPPSLLNPIPGARPRMASAGATGAGVGLPGSAVRRMINTAHPVDEEAGPAIAVAFAVGSRVCVPGGKAGTLRFRGPLPIKAGEWAGVDLDEPAGKNDGTLNGTRYFDCAGPNHGVFILASKLLPESAQGSPVAVADGMLPASPMPPTAAATARPSPGANTGELSRAGSVRSLAMAGKVAAPPQRPPVRTNSSLSRSDSVAAIGQASQDTADGAGPLQGGDFAVGDRVIVSGSKAGVLRFRGPTKFAEGEWAGVELDEPLGKNDGEVKGQRYFKCKPKHGVFAPADKVTREPPPQPLSKRMASLYAPTPVSVTGSGVGVGSSDSPLSLLAAKHPSIDVDSLAECDATLSRVSEKVERLTVEKRRGRLAGALASVANDDTSDAAFGDLRGEAARETEEAMVRLQARLGDMQCALAAQDEAHRAAIARHEADAEALRAAVGAAAASARASGDADVTLRRMRAEKDSLEQQLLQCAHTIGTLRSRVGELERAAAATNAVATAAFTADAVAGQLQRELQERDGVVAQLELQTATLSRVIESLTEGFRQTQRENANLQAMLVARERELELANGKLDRLEKGGREGEFASLAAALAASSGPLSDTMRLALAARDRELAAAQGRAVELEALTQKLNDALAAVHRNGVDRSAAAITDTHVSELIETRSSEIASLEQQLSSLQTVANEHELCAQRLSDALNEASHFRGLLQARDDEVAELRESFERNAGATAVELQTRTEALRVAEEKIRVLESEVLTAQGAISSKEAEVTSVREESASVEARAVSAEGRVSELESAIGALESEVSCLKEKGARDDASIAELRASFERNAGETAVELQTRTEALGVAEEKIRVLESEVLTAQGAISSKE # ORIGINAL: g12199.t1 original gene structure, not modified by PASA NODE_1010_length_14754_cov_46.4722 AUGUSTUS gene 9308 11730 . - . ID=g12199;Name=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS mRNA 9308 11730 . - . ID=g12199.t1;Parent=g12199;Name=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 10943 11730 . - . ID=g12199.t1.exon1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 10943 11730 . - 0 ID=cds.g12199.t1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 10325 10814 . - . ID=g12199.t1.exon2;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 10325 10814 . - 1 ID=cds.g12199.t1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 10013 10136 . - . ID=g12199.t1.exon3;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 10013 10136 . - 0 ID=cds.g12199.t1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 9812 9906 . - . ID=g12199.t1.exon4;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 9812 9906 . - 2 ID=cds.g12199.t1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 9530 9715 . - . ID=g12199.t1.exon5;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 9530 9715 . - 0 ID=cds.g12199.t1;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS exon 9308 9418 . - . ID=g12199.t1.exon6;Parent=g12199.t1 NODE_1010_length_14754_cov_46.4722 AUGUSTUS CDS 9308 9418 . - 0 ID=cds.g12199.t1;Parent=g12199.t1 #PROT g12199.t1 g12199 MSQPSQTGSAHSPPAGGGGGGARVRGKEAPSKLLEELKVLATAVPFDDAVRERVESEFRNNAESKVAKEIGELMQTAVGLECEREVAGLYKRITQGTLYPAHGKVKDINAKVNETEAAMASEEQREAATAHFVELREAVVRALHDDMNRLVTETDDLKNKLMRTADAAEDSAVRFELCVLLNFMDYFFPPALEPKPRQTIELVNLHKSCFKKRKEDPNSPRFAWSYHAYTPEQFRALAVDLWSVKADTKDTKRKNPNGDSDRQPKRRKMDASSPGGGSTPRAPALPNHSAHPTPHTYSPMHTPGLDAAGAGGQSAVQMGGAATAMIRSAPTAVAQLPRAAVAGTGAGATTGAASPLLGASSAPGTPGLASVPSLPAAPGTPTRGSGAVDEAVAAGGSGVGAAGADAPLDGGGDFNDVLTGSGVNTEEESMKLYDGMPSSGSSMFRTNVASFVQFVDDDVLRQKMDRIAHKNGLREMTRKEVRVCVSEALRWHMKNLLEKLIAVNEHRSEILATKFEVEIKDDVLKQMQTLRSKIMEFSKREEEIEKEEKEIAAAAAAAAAGQGVGKNADSKKKESKIGGDDSGQKTESAIQHAIGYR* # PASA_UPDATE: g655.t1, single gene model update, valid-1, status:[pasa:asmbl_6794,status:12], valid-1 NODE_3985_length_2397_cov_38.1425 . gene 271 2111 . - . ID=g655;Name=g655.t1 NODE_3985_length_2397_cov_38.1425 . mRNA 271 2111 . - . ID=g655.t1;Parent=g655;Name=g655.t1 NODE_3985_length_2397_cov_38.1425 . exon 1093 2111 . - . ID=g655.t1.exon1;Parent=g655.t1 NODE_3985_length_2397_cov_38.1425 . CDS 1093 2111 . - 0 ID=cds.g655.t1;Parent=g655.t1 NODE_3985_length_2397_cov_38.1425 . exon 755 846 . - . ID=g655.t1.exon2;Parent=g655.t1 NODE_3985_length_2397_cov_38.1425 . CDS 755 846 . - 1 ID=cds.g655.t1;Parent=g655.t1 NODE_3985_length_2397_cov_38.1425 . exon 271 544 . - . ID=g655.t1.exon3;Parent=g655.t1 NODE_3985_length_2397_cov_38.1425 . CDS 271 544 . - 2 ID=cds.g655.t1;Parent=g655.t1;3_prime_partial=true #PROT g655.t1 g655 MAPASVNSAAAFSSAQPPREGDTAPPKPRYVRVLHALKPLLRSEEWWAVWVGFAFLIGIWIIVQEYELPYPQMLPWKSRPWLAYDSKHILIGLPLLLAAMVGSTLISFYFTNPTTFHMRWIFGLLFLWFLSLVSKTIGAQVSVHKIGFGDAIWTIIIGMIFSNTVYSVRRAPKDPKTGAAPAHNLPKWLHPVVKPEFYIKISVVLLLTNFSEIGHLGLRGFLVATCDTVFIICVMYMFATRVLHIDDKEAIVMVGGATICGSSAATAIVSAIGAEQATGQLAIAIMSIFTVPQIPLLPILSKAFALDFNDQTAGAWIGGSVDSTGAVIASANIRNQNTVSTAAVVKMIQNTLIGPITLVITAIWLRRRTPDVEANEKDPLLDPLIPRESTNDAQDIPPPPKKSVCARVGDSLLVLWDRFPRFVLGFLVSSVVLSFAVEPDARIATKEFAFFVSEWFSALGF # ORIGINAL: g14441.t1 original gene structure, not modified by PASA NODE_2902_length_4797_cov_43.7014 AUGUSTUS gene 536 1964 . - . ID=g14441;Name=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS mRNA 536 1964 . - . ID=g14441.t1;Parent=g14441;Name=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS exon 1849 1964 . - . ID=g14441.t1.exon1;Parent=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS CDS 1849 1964 . - 0 ID=cds.g14441.t1;Parent=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS exon 1601 1680 . - . ID=g14441.t1.exon2;Parent=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS CDS 1601 1680 . - 1 ID=cds.g14441.t1;Parent=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS exon 536 1083 . - . ID=g14441.t1.exon3;Parent=g14441.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS CDS 536 1083 . - 2 ID=cds.g14441.t1;Parent=g14441.t1 #PROT g14441.t1 g14441 MQKRANVAPKYRTLMCVSEDDALSTEITGEEDDAVNGMRDIKERLGQRLENRRSRSDLQAINILKVGDPTIVSSKDSVKRALIERTLKAQLQQKYGKKCFARGKNEAAPLLEAWDRRRASFDVSSLSSSRRPSADMLGPISFARRPSALSGLPGALGGIMPFLSHQLQSQDEPQRRLSIESRTAKSEFILGLNEGGVFVCHNCCSEDFQGVEFSGSKYTYEDFFSEKDWDELGAPVAHHNEKAKAAK* # ORIGINAL: g14442.t1 original gene structure, not modified by PASA NODE_2902_length_4797_cov_43.7014 AUGUSTUS gene 4122 4652 . - . ID=g14442;Name=g14442.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS mRNA 4122 4652 . - . ID=g14442.t1;Parent=g14442;Name=g14442.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS exon 4122 4652 . - . ID=g14442.t1.exon1;Parent=g14442.t1 NODE_2902_length_4797_cov_43.7014 AUGUSTUS CDS 4122 4652 . - 0 ID=cds.g14442.t1;Parent=g14442.t1 #PROT g14442.t1 g14442 MCQHEINTAVCAVDISARQGVRFSGDGSSERNGRHVLYTSDSRTSVSMTGMLEGPVPAGTMSRAACISESRTSGYDRTYQIGAPIMATLRTADTNRTAPLKMYTPTASWCNGSTDTSWVDPETAGNTAASFNGATTKVRYMRCDAGRSGCEGAITRRDAGSVCPTPATANEWDADR* # PASA_UPDATE: g3153.t1, single gene model update, valid-1, status:[pasa:asmbl_5850,status:12], valid-1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . gene 160 2082 . + . ID=g3153;Name=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . mRNA 160 2082 . + . ID=g3153.t1;Parent=g3153;Name=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . five_prime_UTR 160 160 . + . ID=g3153.t1.utr5p1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . exon 160 305 . + . ID=g3153.t1.exon1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . CDS 161 305 . + 0 ID=cds.g3153.t1;Parent=g3153.t1;5_prime_partial=true NODE_3290_length_3814_cov_36.8612_potentialcontaminant . exon 534 625 . + . ID=g3153.t1.exon2;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . CDS 534 625 . + 2 ID=cds.g3153.t1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . exon 943 1354 . + . ID=g3153.t1.exon3;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . CDS 943 1354 . + 0 ID=cds.g3153.t1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . exon 1539 1664 . + . ID=g3153.t1.exon4;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . CDS 1539 1664 . + 2 ID=cds.g3153.t1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . exon 1860 2082 . + . ID=g3153.t1.exon5;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . CDS 1860 2032 . + 2 ID=cds.g3153.t1;Parent=g3153.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant . three_prime_UTR 2033 2082 . + . ID=g3153.t1.utr3p1;Parent=g3153.t1 #PROT g3153.t1 g3153 LEKLGSNHPIYANSLAAIARWHATKGDYPSAVALLETATGILTKSLDEDHPMLGQIFDTIAQVFQVMGKYAEAKSIYEEVLKFRTKKLGKEHTDVATTLSNYGFLLHTMGDSEHGLEALQESMKILTKTVGEVHPTIATVAENVSHILLALKQYAAAEEVLKEVISVREKTLGADSLEVAQGLCNLALVYQSCDQPQKAIEIYERAVPLYEAKLGEEHPTVATLYNNTGQLLLDAGETNVSHQLLQKALDIRVKKLGDDHPDTALSQYALARYYLSVGNRRKARPLFAKSIETFRQKFGDSHEYTQGAESHLSMC* # ORIGINAL: g3154.t1 original gene structure, not modified by PASA NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS gene 2666 3704 . + . ID=g3154;Name=g3154.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS mRNA 2666 3704 . + . ID=g3154.t1;Parent=g3154;Name=g3154.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS exon 2666 3251 . + . ID=g3154.t1.exon1;Parent=g3154.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS CDS 2666 3251 . + 0 ID=cds.g3154.t1;Parent=g3154.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS exon 3556 3704 . + . ID=g3154.t1.exon2;Parent=g3154.t1 NODE_3290_length_3814_cov_36.8612_potentialcontaminant AUGUSTUS CDS 3556 3704 . + 2 ID=cds.g3154.t1;Parent=g3154.t1 #PROT g3154.t1 g3154 MGPYNPSKHLAAVFPLGSRTDGVLVDYAEHATMKSYARATAKALKYSTCDIVDAKGQRVTHLALKTHLVVYASNMSKHAAHQSPPVSGSATEIGEEARLVAVFPRDRRAGGFLYDLRGFESIGMLAEAVSNESKISPITLVDLNRGKISSDQLSTLAETPTTRIIYFEEADPHTDRPSGPAKVKKVPWGPRAPFVGSIPYLVPDTTRKLTALTEKCGGIFRLSIVGVDWVIVRSVVHTGALWAG* # ORIGINAL: g2138.t1 original gene structure, not modified by PASA NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS gene 2169 7918 . + . ID=g2138;Name=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS mRNA 2169 7918 . + . ID=g2138.t1;Parent=g2138;Name=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 2169 2359 . + . ID=g2138.t1.exon1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 2169 2359 . + 0 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 2501 3267 . + . ID=g2138.t1.exon2;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 2501 3267 . + 1 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 3520 3699 . + . ID=g2138.t1.exon3;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 3520 3699 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 3926 4111 . + . ID=g2138.t1.exon4;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 3926 4111 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 4597 4659 . + . ID=g2138.t1.exon5;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 4597 4659 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 4821 4976 . + . ID=g2138.t1.exon6;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 4821 4976 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 5179 5352 . + . ID=g2138.t1.exon7;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 5179 5352 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 5589 5634 . + . ID=g2138.t1.exon8;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 5589 5634 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 5783 5937 . + . ID=g2138.t1.exon9;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 5783 5937 . + 1 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 6295 6552 . + . ID=g2138.t1.exon10;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 6295 6552 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 6851 7018 . + . ID=g2138.t1.exon11;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 6851 7018 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS exon 7272 7918 . + . ID=g2138.t1.exon12;Parent=g2138.t1 NODE_2040_length_7980_cov_39.0815_potentialcontaminant AUGUSTUS CDS 7272 7918 . + 2 ID=cds.g2138.t1;Parent=g2138.t1 #PROT g2138.t1 g2138 MSLGKQGFSLRRLLLIAVFIAVCCSCASAAPCPSWLFAGGVWTSDTTSNDTLKFDCGVVSIRTGSGETTNFTVDCSEQSLSFPEISVDFTYIAPVELLGNVSAAVLRRIEDASSPTQRLLVSMSPMGLPARPTSSNSTDNGATSYSFSRTRASDYAVTVLRADICSVANRSVIYLEGGVYSAPSIPDLGRRTMLYMRRDPNTIVRIEKGTTTPIVRVNESVVVTFDGVDFADSKGRALALLGSARVVLRRCRFLDITCSTTSTSTILSTTTNIGGAIRVDESASLRVEDCVFSNTYAYYGGAISFKSSGDLTVVRTNFTAAYAYIGGAIAVNNTGAPPFISQSIFTDCQARKGPNSKSLGGSIFVDAGARVSISGILVQASLLAGTFASSGGAIAVLAKGVANVTESAFLKVWTSTNGAVSNGGTMRLANCRFSGCGPSQIDAVAGAIYNSGVLQVDNSTFEDNFAYFYASAIASDGTMTITGSVFRGNMAAYGAAVHVRPTANITTLNNCTFRSNIAGGRDYEGYGAALYVESQLSVNGATFEGNRADYGGAVYLSNSVTKSVSFVDAVFKANIAGGRDYEGYGAALDYEGYGAALYVESQLSVNGATFDGNRADYGGAVYLSYSVAKNVSFVDAVFKENKAYLFGGAVSLYRTRNAIAFRRCSFISNYSPSGGAISAELSGAAVALIDSSAFLSNECDNEGGAMAFILNAGGSSLTILNTRVENNTADYGAGLALDSQSRAPVTIDGSVFISNNAGEGGAFYVSLGANSSLSITTTRVEGNMASTYGGAMSLAASGAPVVLNITGSSFVGNIASLDAGALSLWANDGQIIAVAIANSSFVANSAVGTGGAVYGNRISLSVTDTLFRANKASIAAALLALLPDVAELGPSTLSAGTYTMLRRVQFVGNEAAVFGAGAVINRPDRATSPTVVLSEIIGTGNSALAGGCVYSDNDASIVVERSFFENNVAGTGGSMWVAMCARSREERFCFYYFWFR* # ORIGINAL: g5287.t1 original gene structure, not modified by PASA NODE_940_length_15713_cov_52.7032 AUGUSTUS gene 11344 13851 . - . ID=g5287;Name=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS mRNA 11344 13851 . - . ID=g5287.t1;Parent=g5287;Name=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 13636 13851 . - . ID=g5287.t1.exon1;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 13636 13851 . - 0 ID=cds.g5287.t1;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 12960 13378 . - . ID=g5287.t1.exon2;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 12960 13378 . - 0 ID=cds.g5287.t1;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 12448 12542 . - . ID=g5287.t1.exon3;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 12448 12542 . - 1 ID=cds.g5287.t1;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 11344 12041 . - . ID=g5287.t1.exon4;Parent=g5287.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 11344 12041 . - 2 ID=cds.g5287.t1;Parent=g5287.t1 #PROT g5287.t1 g5287 MAGRQAAREILFYYDLVCPYAYMASCLAPAMASRLGVTLTWRPVLLGGLYKATNAPQGAAGSASDVMPQAKKMISAADLRRQLQRNKIPLNWPPSHPGKSLAAMRILSVVPDSLRASLSSRLYRAYWVDNADISQPSVLKTILSKSVGDALATRENVHASVSSDDAMCGVRLADVASGNFDVDAMIAHGSCKDALKRNTDEAIERGAFGVPSFVVNGELIFGADRLHFVERAVGNTAALPLRLAPKPLSASPREVRFFHDFSSPYSFIASTQIERIAAACRHPSLSPANTNIKVTWTPILLGAVFRTIGTPNMPMLSTPPAKIAWAAGDMRRWLELWGVEGFRYPDQFPLRTVLPLRVAVMQPDNPHLYSTIYAAAWKDGVDIGDEGNLRRILTAGGFDADKLIALANTDEAKERLRKNTDDAVALGLCGVPSFSVDGGALVWGQDRLNVVADMLCGWKEGDNECDGVNAPASKL* # ORIGINAL: g5285.t1 original gene structure, not modified by PASA NODE_940_length_15713_cov_52.7032 AUGUSTUS gene 4640 6885 . - . ID=g5285;Name=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS mRNA 4640 6885 . - . ID=g5285.t1;Parent=g5285;Name=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 6493 6885 . - . ID=g5285.t1.exon1;Parent=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 6493 6885 . - 0 ID=cds.g5285.t1;Parent=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 5912 6269 . - . ID=g5285.t1.exon2;Parent=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 5912 6269 . - 0 ID=cds.g5285.t1;Parent=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 4640 5568 . - . ID=g5285.t1.exon3;Parent=g5285.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 4640 5568 . - 2 ID=cds.g5285.t1;Parent=g5285.t1 #PROT g5285.t1 g5285 MLCTTTLAPRRASPPPLIVAITFAVLSVCIVLPLATEAVPMISGGESGPSGPPDAHLHRAARLARPARNAVADRYIVVFRKTATDDDIRRVTAMVTDPTPVTTAFRGVVCTLDNATLHALLQDPAVYLVEQDSVSSIHQFESDGPVPWNLDRLDQRNLPLNNTFTFNTRYTGRGVHIYVIDTGIRATHIEFGGRVGDGVNIIGNGTSTDDCNGHGTHISGTAAGSTVGVAKDATLHPVRVLDCSGSGISSTVIRGLDWVIRNHQSPAVVLMSLGGEESATVDLAVSSATDAGIIVSVAAGNENVDACTTSPARAPEAITVAASDQGDRRASFSNYGVCVDIFAPGVDVVSSWYLGDSTYARLSGTSMAAPIVAGLAANLLSRYNTLSAAEVQATLLCSATNDAVLRTDGAPNNLAYSEFVDPNFVFSQGTDSISEDCTSSSPCSTFQGDLEPPATVAWFPSPLGYNVSEPDASMPHRAWVVSADEGLLGLELVLYKHNDATATWTVVAQSSLPSGVSEFVSHTNTAGWYVWGVHRDFGGGLFTLTMKAPGAPVTQASDR* # PASA_UPDATE: g5286.t1, single gene model update, valid-1, status:[pasa:asmbl_10057,status:12],[pasa:asmbl_10058,status:12], valid-1 NODE_940_length_15713_cov_52.7032 . gene 8781 10463 . + . ID=g5286;Name=g5286.t1 NODE_940_length_15713_cov_52.7032 . mRNA 8781 10463 . + . ID=g5286.t1;Parent=g5286;Name=g5286.t1 NODE_940_length_15713_cov_52.7032 . five_prime_UTR 8781 8830 . + . ID=g5286.t1.utr5p1;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . exon 8781 9313 . + . ID=g5286.t1.exon1;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . CDS 8831 9313 . + 0 ID=cds.g5286.t1;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . exon 9697 9806 . + . ID=g5286.t1.exon2;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . CDS 9697 9806 . + 0 ID=cds.g5286.t1;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . exon 9994 10463 . + . ID=g5286.t1.exon3;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . CDS 9994 10306 . + 1 ID=cds.g5286.t1;Parent=g5286.t1 NODE_940_length_15713_cov_52.7032 . three_prime_UTR 10307 10463 . + . ID=g5286.t1.utr3p1;Parent=g5286.t1 #PROT g5286.t1 g5286 MSDKQKAPSAAKSFIAGGFGGMCLVAAGHPLDTIKVRLQTMEIVPGKAPMYSGAVDCAMKTIRKEGFFGLYRGMAAPIAGVTPMYAVCFLGYGIGQNLQRKSPDDKLNLFQIFNAGCLSGVFTTAIMVPGERVKCLLQIQGAQVEAGGKPKYSGPMDVFKKVYKESGIRGIYKGTVATLWRDIPGSGAYFMAYEGFKRYLSKEDGSLSPVAVLVSGGMAGVFNWIVSLPADVLKSRLQTAPEGTYPNGLRDVLKQLIKQDGYLGLYRGIAPVMLRAFPANAACFMGYEMCMKFLNYIAPNL* # ORIGINAL: g5288.t1 original gene structure, not modified by PASA NODE_940_length_15713_cov_52.7032 AUGUSTUS gene 14535 15323 . + . ID=g5288;Name=g5288.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS mRNA 14535 15323 . + . ID=g5288.t1;Parent=g5288;Name=g5288.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 14535 15323 . + . ID=g5288.t1.exon1;Parent=g5288.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 14535 15323 . + 0 ID=cds.g5288.t1;Parent=g5288.t1 #PROT g5288.t1 g5288 MASVVSFSSLPLEIVVHHIAPSLGNVDLSSLSKVNSSLHTHLRHVRLFHLWPMYNRKYIKDAQFRDEVRATIPVDRLALYAFDRSLQDLSAFEGVHSALFLFARNGDTSCNTTDLSPLKNVHTVQIEITPEVPAESLAPLADVKVICLSRHDLVPSFVKAQSVDLYSAHVDLNGLAGVPRVRLFMCRTAQNAPITDLSALRQARFVELNNLSELEDLRCLENAREVVIKDCPRISTLPAVTHLRAFTWQSWKMSLMPAPCAS* # ORIGINAL: g5284.t1 original gene structure, not modified by PASA NODE_940_length_15713_cov_52.7032 AUGUSTUS gene 634 2612 . - . ID=g5284;Name=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS mRNA 634 2612 . - . ID=g5284.t1;Parent=g5284;Name=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 2442 2612 . - . ID=g5284.t1.exon1;Parent=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 2442 2612 . - 0 ID=cds.g5284.t1;Parent=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 2185 2271 . - . ID=g5284.t1.exon2;Parent=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 2185 2271 . - 0 ID=cds.g5284.t1;Parent=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS exon 634 1998 . - . ID=g5284.t1.exon3;Parent=g5284.t1 NODE_940_length_15713_cov_52.7032 AUGUSTUS CDS 634 1998 . - 0 ID=cds.g5284.t1;Parent=g5284.t1 #PROT g5284.t1 g5284 MVSSDVILAPTKATLKVIIMMLCGYVLAKQKVLDGPVSKKLGILLVNCLIPALLFAKITEVFVGDSHIADYAGLFACGPILIVAGMALGLLVHAIAGFPKGYRRFTVACVAIGNSRSMPLALIGSLAYSVPALMKDDTDSPASVEKRGVTSVLMYNVITTVITWTVGYYMLMPYNRAAGGVMINAGETTDAHLPIDIVAGDKYVANETVDFGSMAECSTTHGDYASIAVAIVRNSGDESATASLPQSPLLRLTSTAHSHQYVSDGGSIRMSRRERSLVESHSETTLVTAPLITSESNCDDDFYARPPPSPPSCSDGMATRARCMYTAYIRALSRIASLLSATFHKLPLPLQSVAFRIYESINAPVVAAALAIAFGFTPGAANLIHIPKSCDTGGGCSSPLDFVGSTLDTLGGGVVPLMTILTGAAFAKGIAHKEDADADHVPQGMSRWLLVCVCVARLAIMPVIGCATAILGRKVGLLRDDPLTVFVVMLQSCTPSAMQLNVIASSVGRKENDIALVLFVQSIAAILSVTISVTVFIMFI* # PASA_UPDATE: novel_model_3_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_609,status:3], valid-1 NODE_1162_length_13448_cov_37.7579 . gene 3172 3915 . + . ID=novel_gene_3_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1162_length_13448_cov_37.7579 . mRNA 3172 3915 . + . ID=novel_model_3_5b6be656;Parent=novel_gene_3_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_1162_length_13448_cov_37.7579 . five_prime_UTR 3172 3221 . + . ID=novel_model_3_5b6be656.utr5p1;Parent=novel_model_3_5b6be656 NODE_1162_length_13448_cov_37.7579 . exon 3172 3537 . + . ID=novel_model_3_5b6be656.exon1;Parent=novel_model_3_5b6be656 NODE_1162_length_13448_cov_37.7579 . CDS 3222 3521 . + 0 ID=cds.novel_model_3_5b6be656;Parent=novel_model_3_5b6be656 NODE_1162_length_13448_cov_37.7579 . exon 3779 3915 . + . ID=novel_model_3_5b6be656.exon2;Parent=novel_model_3_5b6be656 NODE_1162_length_13448_cov_37.7579 . three_prime_UTR 3522 3537 . + . ID=novel_model_3_5b6be656.utr3p1;Parent=novel_model_3_5b6be656 NODE_1162_length_13448_cov_37.7579 . three_prime_UTR 3779 3915 . + . ID=novel_model_3_5b6be656.utr3p2;Parent=novel_model_3_5b6be656 #PROT novel_model_3_5b6be656 novel_gene_3_5b6be656 MSSLSDNQRRLDIAPATVNDEADWRRMWCEYYALSGRTITQDTTDDVWSRIVDQSSPTKAYVAIFEGRAAGFCNLVVHESTWSRRPYRRCAHSPLGGIG* # ORIGINAL: g5417.t1 original gene structure, not modified by PASA NODE_1162_length_13448_cov_37.7579 AUGUSTUS gene 271 2604 . - . ID=g5417;Name=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS mRNA 271 2604 . - . ID=g5417.t1;Parent=g5417;Name=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 2278 2604 . - . ID=g5417.t1.exon1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 2278 2604 . - 0 ID=cds.g5417.t1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 2115 2183 . - . ID=g5417.t1.exon2;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 2115 2183 . - 0 ID=cds.g5417.t1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 1705 1803 . - . ID=g5417.t1.exon3;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 1705 1803 . - 0 ID=cds.g5417.t1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 1241 1285 . - . ID=g5417.t1.exon4;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 1241 1285 . - 0 ID=cds.g5417.t1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 943 1028 . - . ID=g5417.t1.exon5;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 943 1028 . - 0 ID=cds.g5417.t1;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 271 421 . - . ID=g5417.t1.exon6;Parent=g5417.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 271 421 . - 1 ID=cds.g5417.t1;Parent=g5417.t1 #PROT g5417.t1 g5417 MSNRAPCKFFAKGTCRFGDQCKFSHAVGSQQQLQPQQQPQQQRGFGGGFGGGGGFQTQPTQQRGGFQAQQGGGFGGGGGFQTQPTQQRGGFQAQQGGGGFGSGFGTQQNQQRGGFGGGFGGGGGGGGRGGFQQQQQQQRGGGFGFNAPPRGGGGGGFFGGIQNNNRGGFGNRGGGRGGGNRGGFQQQQGRFGQQPRAKRDDELTPDDIIRTDLELDVFPFTCYTWKGEMPNLISGDTSPEELRWDAYFTMAGTGNLAAH # ORIGINAL: g5418.t1 original gene structure, not modified by PASA NODE_1162_length_13448_cov_37.7579 AUGUSTUS gene 6436 8507 . + . ID=g5418;Name=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS mRNA 6436 8507 . + . ID=g5418.t1;Parent=g5418;Name=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 6436 6665 . + . ID=g5418.t1.exon1;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 6436 6665 . + 0 ID=cds.g5418.t1;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 7135 7263 . + . ID=g5418.t1.exon2;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 7135 7263 . + 1 ID=cds.g5418.t1;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 7703 7739 . + . ID=g5418.t1.exon3;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 7703 7739 . + 1 ID=cds.g5418.t1;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS exon 8112 8507 . + . ID=g5418.t1.exon4;Parent=g5418.t1 NODE_1162_length_13448_cov_37.7579 AUGUSTUS CDS 8112 8507 . + 0 ID=cds.g5418.t1;Parent=g5418.t1 #PROT g5418.t1 g5418 MLHFGISTLMSNIFHTAYIPSQDLAKSFRNGEYDNFTDDDDILLRCIVSISRDAAFRDALEAPSYRSQTLVTDSTIYFFDAVDRIFADDYIPSLMDIIRARVPTTGIVETDFEIDSNKFSEFDEVLYEDETANRLKESLNLFSTIAGYRYFRRTPIILFLNKSDLFDEKVQRKGANQLYTITDPEYSSDGTPDLDVEKARDHVLRLFTEEAAAVERRDILSAPERMVYPHFTCATNTENVKMVFNAVKDIIIRKNLEEAGFLL* # PASA_UPDATE: g5419.t1, single gene model update, valid-1, status:[pasa:asmbl_610,status:12], valid-1 NODE_1162_length_13448_cov_37.7579 . gene 9725 13252 . + . ID=g5419;Name=g5419.t1 NODE_1162_length_13448_cov_37.7579 . mRNA 9725 13252 . + . ID=g5419.t1;Parent=g5419;Name=g5419.t1 NODE_1162_length_13448_cov_37.7579 . five_prime_UTR 9725 9899 . + . ID=g5419.t1.utr5p1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 9725 10063 . + . ID=g5419.t1.exon1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 9900 10063 . + 0 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 10273 10464 . + . ID=g5419.t1.exon2;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 10273 10464 . + 1 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 10737 10927 . + . ID=g5419.t1.exon3;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 10737 10927 . + 1 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 11503 11667 . + . ID=g5419.t1.exon4;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 11503 11667 . + 2 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 11971 12045 . + . ID=g5419.t1.exon5;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 11971 12045 . + 2 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 12458 12564 . + . ID=g5419.t1.exon6;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 12458 12564 . + 2 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 12806 12905 . + . ID=g5419.t1.exon7;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 12806 12905 . + 0 ID=cds.g5419.t1;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . exon 13159 13252 . + . ID=g5419.t1.exon8;Parent=g5419.t1 NODE_1162_length_13448_cov_37.7579 . CDS 13159 13252 . + 2 ID=cds.g5419.t1;Parent=g5419.t1;3_prime_partial=true #PROT g5419.t1 g5419 MDRRASRTTPTAALPVSSLRSWANTQVPHYLPVDSEAEKCKFSINNDVNRRMYLWMGSLTSLDVDAIVNSSNEALNERNAMSESIHQAAGPELRQECWKLDGCRTGEAKITPGFKLPARHVIHTVGPRFNPKYATAAESALFNCYRNSLQLLKEAKLHTIAFPPIHSLRRGYPPEGGAHIALRTVRRFVERHGEGIDAVVLVLEPADVALYEQLMPLYFPRTDVELAYATRHLPENIGNEEGEPVIEERKIRIADKPLLARDDSDFDGHERARALSTMNGDHDSERRQRIGSRSSDDQGDIEAMRRYQRRLKIARQEDVADVARHRMLYQSGTDTMGRPIIMFVGRSCPAASIDSERLTSYL # PASA_UPDATE: g2110.t1, single gene model update, valid-1, status:[pasa:asmbl_9052,status:12], valid-1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . gene 5782 7808 . - . ID=g2110;Name=g2110.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . mRNA 5782 7808 . - . ID=g2110.t1;Parent=g2110;Name=g2110.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . five_prime_UTR 7763 7808 . - . ID=g2110.t1.utr5p1;Parent=g2110.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 5782 7808 . - . ID=g2110.t1.exon1;Parent=g2110.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 5975 7762 . - 0 ID=cds.g2110.t1;Parent=g2110.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . three_prime_UTR 5782 5974 . - . ID=g2110.t1.utr3p1;Parent=g2110.t1 #PROT g2110.t1 g2110 MSSGHSSKKSRSRAVESIDESVMPPAKAQKMAFSGALVSLPSEDLVMSDESEESQIPASPPHNKPASPTPLRRTSARIASNPTPSIRTRDSDDESEDSERTPRNRRRSQSRATARASTPNRSGTTRRTRRRTTSPPTSTPNHATTNETPAEMSLRIENMMKLGYIAQHRSVTPNEVLSFAIWINKGGVGKSTLAFQIACAVALAAKKECNILMIDACSQANMSQMLLGGVNGGAELVEALSSRKKTIAGYMAKCVDTNCTVTDINDYLVRPSAVNASIPDNIYLVCGDPYIDKIAQGVSEFSQRLPLTGDANTNWLAAHKMIHQLIEAVSRMGDRKWIVFIDTNPAFTIYTEIAICGAQYLIIPATADESSRVGAVACLNLVYGSTTGSRADIPQYNLRTFAARAKEQEAEDMLQMPKIFMLVTNRSTQHKNSAASAYKAMSDGTCKVLYDNALEETSHYTIGDNQAFIDAIAELKLAEQYGVATDEIHNTLQLLFATCMHVDLRDFESPGVVSHALGIPLETLNSGTHEINGKKCQLKINVIKGYRKALHKMVDPILRAAGIAVSEPESDDGALESDNGAGSESPAEMEGVADA* # ORIGINAL: g2109.t1 original gene structure, not modified by PASA NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS gene 3327 4585 . - . ID=g2109;Name=g2109.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS mRNA 3327 4585 . - . ID=g2109.t1;Parent=g2109;Name=g2109.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS exon 4142 4585 . - . ID=g2109.t1.exon1;Parent=g2109.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS CDS 4142 4585 . - 0 ID=cds.g2109.t1;Parent=g2109.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS exon 3327 3539 . - . ID=g2109.t1.exon2;Parent=g2109.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS CDS 3327 3539 . - 0 ID=cds.g2109.t1;Parent=g2109.t1 #PROT g2109.t1 g2109 MTAIGRLPMGTAALESDCAFAGGRNYDACDDNDENDDNDDNDENDIERMIMLKTAAVVERALAHQMRTSVRSALQQWRQRSLNNAPRASGTTESSAPALPSMPARTALIDTPESIRSWLVGYGMPAPYVNEPVYDSATGVPAPMTACVAMNNKAEEPRRTPMPNCSRLETIIKLQNENALLKATALLNEIEMLKNAITQSQLHDKDAKLDSRQFSKIR* # PASA_UPDATE: g2111.t1, single gene model update, valid-1, status:[pasa:asmbl_9053,status:12], valid-1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . gene 8997 14137 . + . ID=g2111;Name=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . mRNA 8997 14137 . + . ID=g2111.t1;Parent=g2111;Name=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 8997 9078 . + . ID=g2111.t1.exon1;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 8997 9078 . + 0 ID=cds.g2111.t1;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 9159 9314 . + . ID=g2111.t1.exon2;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 9159 9314 . + 2 ID=cds.g2111.t1;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 9410 9500 . + . ID=g2111.t1.exon3;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 9410 9500 . + 2 ID=cds.g2111.t1;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 9593 14137 . + . ID=g2111.t1.exon4;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 9593 14072 . + 1 ID=cds.g2111.t1;Parent=g2111.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . three_prime_UTR 14073 14137 . + . ID=g2111.t1.utr3p1;Parent=g2111.t1 #PROT g2111.t1 g2111 MDIDLLFVRNGDSWAASAADVVEILGIGGDAGRSLVKRVTKGNRSLKITKNVNKRVRNFLTPEGVRKICDRRDQATKEKGRALISFLDDKIKDAPSEPSSAIDIKYRISDIQLVCSRCGEDPFQGKYGSLIDTIDTSGSDGKGSAVMVHAYCDKVANLVWDKVDENGAPLVQHIGPSGVETSCAACSSPSTSTLRCSAQGCGLAFHTRCAMGGNADYFPILSTSKLLFFCSEKCHNDSLKEPWTHKRLIDDVANDDVSESTRAPGSVASDDDMDESEGSPNSDRFKSALATLKASNPDAHAIVSEFRDLVDVLESGVGFTHLLVSEHGQGKTWLINLLLMLTVCERDSYRRRSRGELDCFTSSGDVPCQPKDAEDWPLDYNIQWGTGVQARAEEFARTFGVIRDRVDGDVNLTAVRPFLLPSRDVGVPTTSCAVTVRQGSVFHVVVKFHGLSWAENCLREYRFARESLFDDDDIARREGAEERALIKTRFALLTGSDVMTLDALSPDEIGKKTVDSKLDVYLGETFVIYLEDAKSDVLPIDHMEYDRIVVREFLAKLMHFDGDIEQQSRRAILKSVTVYAPCSILDNSTRIIDAPGLNDPDPLNMEVLRQAEESATSLVILANRTIASDTMIESFLKDSVIFKRLVERKHEELRPRILLIHSVEKTSTDVSFDLLKGGQATTATHSEMRVASSEQKLKELIADALSRRADIDDQNAALASCLEDVGVKLLYPTMFASMTMNLGCAVSRDSVGSYATAIRTSGGLDILSWLSKDRLEHSRVEVQEVARSLCERLNGLKAHLDIASVKVPGADRFKTGMQRRGVAIDTDQLTKDVERLNKDAIAAFRAHIHHDFAAKLADFLQCLSKEALEDWATRSKGLTTRNRSVALNPNYRGRAVSFQVRLSLLNNGELRGVERPEFKNQLKKLIDEFFDSLKNLVDDVGRAVGGYVTSILRLVVSKETLEGLVDICFKKPVMGRIDKMRTAGTRYFISAGVLQRCISDAITTDLKKTLKKAHGAGRIDEARAKVKKGFESLGKDSSSVSKGALNAIKDRFETRFIDLEKYLCSAHTPFVRRAIYAILDVLRGQVNGQKLRDGIASFVTQLQQGIVDRCARPAEDEYALYDPPLRHYFCMDLVLRNEYARARTLSVSVPGAVNANLADGDHVEFLHEANDAGPELLAFVKGPWRIVGQSGFVQGTSSDLACSSVFRAVACALLAQDGTVSERSVDDVERALRSALCVEKACNAIRESLPEHPDVEMPGGTRKAAKRPLAKQKEYTRLTSTNSTLLSGDLRLLASFLGVPVNLWRPTSIPGASKWDILRWNPPFDGMASPYALNIVAFSAVRVFALVPLEKRRPKRAASDATTGDSEPRKRPHFEAAGSATASVLVGSGIASGTFAHMDGSGANSRKRPRDMDTDGFEVEREPKAARRDKDTDGDEVEAEPTLGSRVCVMFDPNVIVAKKNEFLPVLNDWLGGSVSRTVGVPVALWECLYRLAGLTQMTVKVSSNWIPRLEELRSAGRLVEQPYDDDLAFRRGSASYLAAVALSEKTADVDRTLHFARQLKDRFDEILFVSDLVNPSVIGDSNVKPVLWEHFETEYADEEPD* # PASA_UPDATE: g2108.t1, single gene model update, valid-1, status:[pasa:asmbl_9051,status:12], valid-1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . gene 2 452 . + . ID=g2108;Name=g2108.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . mRNA 2 452 . + . ID=g2108.t1;Parent=g2108;Name=g2108.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . exon 2 452 . + . ID=g2108.t1.exon1;Parent=g2108.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant . CDS 2 184 . + 0 ID=cds.g2108.t1;Parent=g2108.t1;5_prime_partial=true NODE_722_length_18615_cov_44.0547_potentialcontaminant . three_prime_UTR 185 452 . + . ID=g2108.t1.utr3p1;Parent=g2108.t1 #PROT g2108.t1 g2108 IDLPYALKPASIPSSIVGTDKSGYQKTIDTMIVSFSNAADVPCVRVYGLGSQDSSTGRRT* # ORIGINAL: g2113.t1 original gene structure, not modified by PASA NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS gene 15991 17004 . - . ID=g2113;Name=g2113.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS mRNA 15991 17004 . - . ID=g2113.t1;Parent=g2113;Name=g2113.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS exon 15991 17004 . - . ID=g2113.t1.exon1;Parent=g2113.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS CDS 15991 17004 . - 0 ID=cds.g2113.t1;Parent=g2113.t1 #PROT g2113.t1 g2113 MARTKQIRRCRTPKPTPKDYFSSLPNETILCHVVTFLSNKDRASLAEVNSRLHCLLKFARLYTLRDDYLKRYWISDVLRKVVWTDISRKRLKLIYRGTYDRPHPFGSTFGVTDVSALGGVHTLDLSGCKGVTDVSALGGVHTLYLSGCEGVTDVSALGGVHTLYLSGCEGVTDVSALGGAYSLMFNGCGGLRDVSALGRVHMLDLSYCEGVTDVSALGAVHTLNISGCAVTNVSALGRVYSLKLARCTGLTDVSALGRVHTLDLSNCRRVDVSMLGDVHTLNLSYSGVTDVSALGGLYKLDLTGCERVTDVSALGGVHALTLRCPRTPPSDSELFLI* # ORIGINAL: g2112.t1 original gene structure, not modified by PASA NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS gene 15021 15799 . - . ID=g2112;Name=g2112.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS mRNA 15021 15799 . - . ID=g2112.t1;Parent=g2112;Name=g2112.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS exon 15409 15799 . - . ID=g2112.t1.exon1;Parent=g2112.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS CDS 15409 15799 . - 0 ID=cds.g2112.t1;Parent=g2112.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS exon 15021 15253 . - . ID=g2112.t1.exon2;Parent=g2112.t1 NODE_722_length_18615_cov_44.0547_potentialcontaminant AUGUSTUS CDS 15021 15253 . - 2 ID=cds.g2112.t1;Parent=g2112.t1 #PROT g2112.t1 g2112 MASQIPVSFSTLPIEVVVCRLVPNKDRASLARVNSLLRRVLGHERLYTLRDAFARRYWRSPEFRVAVCADIPRERIVLTLREKKGIRLAGDLSALAGVHTLDLEGCTGVTDVSALGGVYSLNLNGCKRVRRVTDVSALGGVHTLNLGGCSGVKDVSALGGVYSLSLSGCEGVTDVPALGGVYSLELTGCQGVTDVSAFGGVHQTLRL* # ORIGINAL: g3839.t1 original gene structure, not modified by PASA NODE_3344_length_3680_cov_55.1337 AUGUSTUS gene 175 974 . + . ID=g3839;Name=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS mRNA 175 974 . + . ID=g3839.t1;Parent=g3839;Name=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 175 294 . + . ID=g3839.t1.exon1;Parent=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 175 294 . + 1 ID=cds.g3839.t1;Parent=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 537 656 . + . ID=g3839.t1.exon2;Parent=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 537 656 . + 1 ID=cds.g3839.t1;Parent=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 914 974 . + . ID=g3839.t1.exon3;Parent=g3839.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 914 974 . + 1 ID=cds.g3839.t1;Parent=g3839.t1 #PROT g3839.t1 g3839 LADTHEYIDMDVAVDELSARTVDKKLRVCRNPSTNIRSDTYKKSQVAKDAANEDKRMAEIEASKKRRAQNDEECEALVGKSDGDTPSKRARTEGAEGAR* # ORIGINAL: g3840.t1 original gene structure, not modified by PASA NODE_3344_length_3680_cov_55.1337 AUGUSTUS gene 1562 3229 . - . ID=g3840;Name=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS mRNA 1562 3229 . - . ID=g3840.t1;Parent=g3840;Name=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 2939 3229 . - . ID=g3840.t1.exon1;Parent=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 2939 3229 . - 0 ID=cds.g3840.t1;Parent=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 2037 2405 . - . ID=g3840.t1.exon2;Parent=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 2037 2405 . - 0 ID=cds.g3840.t1;Parent=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS exon 1562 1831 . - . ID=g3840.t1.exon3;Parent=g3840.t1 NODE_3344_length_3680_cov_55.1337 AUGUSTUS CDS 1562 1831 . - 0 ID=cds.g3840.t1;Parent=g3840.t1 #PROT g3840.t1 g3840 MVSESAAVAAVVVAQFVTNTLRALAAANSDINPIPITLASYIFVIIALRVASIVGLLQHPSFDPLKLRLIFPLIFASVAAQTIVWIWLSDPDSGNILVARAFFIPCILLLVWESTQERHSIAAAPCIMLVCLGFGSYAFGDHETHRPIAVVAVAAFGGLAAAARVTGIKKGFDTVTDSVPSLLFHYTLGGTIALAITAPSLFKATDAWELHSSVPMATVAALLGSLSMFLAFLQIKQIGAVSHAISRAPESITGLLIIAAVHKTDDLRLAQLIGFFLVGFGALFYAALASKRKLNSTRGDDDISLPRPR* # ORIGINAL: g3043.t1 original gene structure, not modified by PASA NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS gene 548 1242 . - . ID=g3043;Name=g3043.t1 NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS mRNA 548 1242 . - . ID=g3043.t1;Parent=g3043;Name=g3043.t1 NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS exon 1083 1242 . - . ID=g3043.t1.exon1;Parent=g3043.t1 NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS CDS 1083 1242 . - 0 ID=cds.g3043.t1;Parent=g3043.t1 NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS exon 548 780 . - . ID=g3043.t1.exon2;Parent=g3043.t1 NODE_4546_length_1476_cov_38.2377_potentialcontaminant AUGUSTUS CDS 548 780 . - 2 ID=cds.g3043.t1;Parent=g3043.t1 #PROT g3043.t1 g3043 GAGNPLKRKTAAAAVDPKKKELESEKRLQHKVAREAKKSARPKRVRQLAEEDDERPRKKARTDIKPASSGAFDRELTDTRGKSINKLRKQGGANAKTTKGDAVERKKPKNPTGKSKHGFKSKKKWVVLSL* # PASA_UPDATE: g4986.t1, single gene model update, valid-1, status:[pasa:asmbl_10266,status:12], valid-1 NODE_997_length_14928_cov_39.6166 . gene 168 2721 . - . ID=g4986;Name=g4986.t1 NODE_997_length_14928_cov_39.6166 . mRNA 168 2721 . - . ID=g4986.t1;Parent=g4986;Name=g4986.t1 NODE_997_length_14928_cov_39.6166 . five_prime_UTR 2455 2721 . - . ID=g4986.t1.utr5p1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 2271 2721 . - . ID=g4986.t1.exon1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 2271 2454 . - 0 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 2070 2119 . - . ID=g4986.t1.exon2;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 2070 2119 . - 2 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 1658 1807 . - . ID=g4986.t1.exon3;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 1658 1807 . - 0 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 1471 1533 . - . ID=g4986.t1.exon4;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 1471 1533 . - 0 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 861 1071 . - . ID=g4986.t1.exon5;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 861 1071 . - 0 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 593 638 . - . ID=g4986.t1.exon6;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 593 638 . - 2 ID=cds.g4986.t1;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . exon 168 292 . - . ID=g4986.t1.exon7;Parent=g4986.t1 NODE_997_length_14928_cov_39.6166 . CDS 168 292 . - 1 ID=cds.g4986.t1;Parent=g4986.t1;3_prime_partial=true #PROT g4986.t1 g4986 MATVGVHETPVGHNLNLKTQTLTEVLTRLSPAPVRASPHAQAARSPVIKDDDYIFEKTLGEGSYGKVKLARHRISGEKVAVKIIDKTSLSDPDDAERVMREILVMKSLRHPYIAELFEVIDRPSEIRMVMQYCPGGELFDYIVAHQRIQEKEARRIFRQIFAAIDYCHRNNIIHRDLKTENLLFDEGKNIKIIDFGFTNTYKHDAFLDTFCGSPAYAAPEMIAATKYTGPEADIWSLGVTLFAILCGYLPFDDEDTARMFGNIQEARFAIPLWVSP # PASA_UPDATE: g4988.t1, single gene model update, valid-1, status:[pasa:asmbl_10268,status:12], valid-1 NODE_997_length_14928_cov_39.6166 . gene 7245 9672 . + . ID=g4988;Name=g4988.t1 NODE_997_length_14928_cov_39.6166 . mRNA 7245 9672 . + . ID=g4988.t1;Parent=g4988;Name=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 7245 7253 . + . ID=g4988.t1.exon1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 7245 7253 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 7381 7449 . + . ID=g4988.t1.exon2;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 7381 7449 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 7653 7760 . + . ID=g4988.t1.exon3;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 7653 7760 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 8059 8163 . + . ID=g4988.t1.exon4;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 8059 8163 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 8489 8596 . + . ID=g4988.t1.exon5;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 8489 8596 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . exon 8795 9672 . + . ID=g4988.t1.exon6;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . CDS 8795 9502 . + 0 ID=cds.g4988.t1;Parent=g4988.t1 NODE_997_length_14928_cov_39.6166 . three_prime_UTR 9503 9672 . + . ID=g4988.t1.utr3p1;Parent=g4988.t1 #PROT g4988.t1 g4988 MGATVSAAIDAAADLANSNPETGYHETPDIKHTAPQHRRFLTYDGVGSGSVLERRRQHERMRARELTADDASRSLQRILDQKSKPKGLEKIVDDMIRESMEKGEFDNLPGKGRPIKYEPENPYIDPITGHLNKVLQNAGLLPEWISLEKEIRNDLEVCRSRLRNALDAVVNPPNIRRDAAAALHSAGIHFGRMGGIAVPPPRSQPARDPSIMTRIFRLLWRDYGRMMDDADSAELQRRADAEADAVKDSHRPPKVVARIGDEYTLHLTHGQRAQVASARKDFEEAVREVNRRIEKYNLIVPVLNKQRMHVNAQREFLEGLKWATNARRPAVGHDSGIAEHQGNLTPSTDQSSRDICGPLEEQQKPMGG* # ORIGINAL: g4987.t1 original gene structure, not modified by PASA NODE_997_length_14928_cov_39.6166 AUGUSTUS gene 3561 6042 . - . ID=g4987;Name=g4987.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS mRNA 3561 6042 . - . ID=g4987.t1;Parent=g4987;Name=g4987.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 4935 6042 . - . ID=g4987.t1.exon1;Parent=g4987.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 4935 6042 . - 0 ID=cds.g4987.t1;Parent=g4987.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 3561 4822 . - . ID=g4987.t1.exon2;Parent=g4987.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 3561 4822 . - 2 ID=cds.g4987.t1;Parent=g4987.t1 #PROT g4987.t1 g4987 MSASPAQDDGVSSAQLAMPTSGANKTENDASFSSIPAGGSTSSAFTFASAESGGFKFSSSTPASADTGSAKDGAAAGFTTGLFGSIAPPALNGEGTTGSFKFSLPSAPASGGTGGFSFTSPASTGNEKSLFGSNTETTGFKFPSPSAPSSGGTGGFSFTSPASTGNEKGLFGSTTTPTSVSDGTTGGFKFPSPSAPASGGTGGFSFTSPASTGNEKGLFGSTTTPTSVSDGTTGSFKFSLPSAPASGGTGGFSFTSPASTGKKMRRLGSNTETMGFKFPSPSAPSSGGTGGFSFTSPASTGNEKGLFGSTTTPTSVSDGTTGGFKFPSPSAPSSGGTGGFSFTAPASTGNEKGLFGSTTTPTSVSDGTTGNEKGLFGSTTTPTSVSDGTTGSFKFPSPSAPASGGTGGFSFMNPQPLTADLPPINTAPDEPPYECPAVDGINLLDGIPEKVLLENVRPFLSNRDVSRLGRVNSSLRSKLAPVRVYKLHRQISVRFSDDPKFREEVLQHIPLEKLAVNLTNTFVGIPVDMHIFEGVHSLYLYRCGALTNADLEVLGTVRALELGQCTTIDNVSSLAGLYKLSIRVCPKVIDLSPLGNLHTFEYESHNRDLILDVTPLARIHTLSLSVANLTNLTALSKVTILILKHYRGSDVSMLGTVKYLKLSHCPNVMNVSALGNVRILQVSHSAVSDVSALGRVDTLILDGNAKLTDVSKLGNVRQLSLCRTSVAYVGTLYKVKRLDLSFCESVKDISILVGRVRHLCADGTDVRSPPKSTTVPISFEVETKCGLRP* # PASA_UPDATE: g4990.t1, single gene model update, valid-1, status:[pasa:asmbl_10267,status:3], valid-1 NODE_997_length_14928_cov_39.6166 . gene 12470 13906 . - . ID=g4990;Name=g4990.t1 NODE_997_length_14928_cov_39.6166 . mRNA 12470 13906 . - . ID=g4990.t1;Parent=g4990;Name=g4990.t1 NODE_997_length_14928_cov_39.6166 . five_prime_UTR 13873 13906 . - . ID=g4990.t1.utr5p1;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . exon 13793 13906 . - . ID=g4990.t1.exon1;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . CDS 13793 13872 . - 0 ID=cds.g4990.t1;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . exon 13472 13649 . - . ID=g4990.t1.exon2;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . CDS 13472 13649 . - 1 ID=cds.g4990.t1;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . exon 12470 13244 . - . ID=g4990.t1.exon3;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . CDS 12645 13244 . - 0 ID=cds.g4990.t1;Parent=g4990.t1 NODE_997_length_14928_cov_39.6166 . three_prime_UTR 12470 12644 . - . ID=g4990.t1.utr3p1;Parent=g4990.t1 #PROT g4990.t1 g4990 MASVDALAKDAALERQFVEELERLSKSEMESKTAVNSAESMRSRAFGWLAVGLTMAGIAGLYAVVTPFVTPALRKHCLPFVPASKEQIDLVVRYCRGRGKMVDLGSGDGRVAIATAKELGIPSVGIELNYWLVLYSRMRARLQGVGRLATFYRKDLFTANIKDYDTIVIFGVQEMLADVERKLEKEMRDDARVVCCRFGLPSWTPCEEVIDPKGEKGIANVWVYGKQATTDQQKDEGMALAFLPRHKRPPRRPVAAAVATATATATAAVGATERSGSGTDTAHPR* # PASA_UPDATE: g4991.t1, single gene model update, valid-1, status:[pasa:asmbl_10269,status:12], valid-1 NODE_997_length_14928_cov_39.6166 . gene 14153 14689 . + . ID=g4991;Name=g4991.t1 NODE_997_length_14928_cov_39.6166 . mRNA 14153 14689 . + . ID=g4991.t1;Parent=g4991;Name=g4991.t1 NODE_997_length_14928_cov_39.6166 . five_prime_UTR 14153 14203 . + . ID=g4991.t1.utr5p1;Parent=g4991.t1 NODE_997_length_14928_cov_39.6166 . exon 14153 14301 . + . ID=g4991.t1.exon1;Parent=g4991.t1 NODE_997_length_14928_cov_39.6166 . CDS 14204 14301 . + 0 ID=cds.g4991.t1;Parent=g4991.t1 NODE_997_length_14928_cov_39.6166 . exon 14572 14689 . + . ID=g4991.t1.exon2;Parent=g4991.t1 NODE_997_length_14928_cov_39.6166 . CDS 14572 14689 . + 1 ID=cds.g4991.t1;Parent=g4991.t1 #PROT g4991.t1 g4991 MSLEDAIGRVLGEMTDLRHDIHKHPEPGFEEHRTHGLLMGYIQRIGCSNVRVLATTGIIADLMGTGPAVPG* # ORIGINAL: g4989.t1 original gene structure, not modified by PASA NODE_997_length_14928_cov_39.6166 AUGUSTUS gene 10050 11946 . + . ID=g4989;Name=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS mRNA 10050 11946 . + . ID=g4989.t1;Parent=g4989;Name=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 10050 10130 . + . ID=g4989.t1.exon1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 10050 10130 . + 0 ID=cds.g4989.t1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 10285 10405 . + . ID=g4989.t1.exon2;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 10285 10405 . + 0 ID=cds.g4989.t1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 10750 10920 . + . ID=g4989.t1.exon3;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 10750 10920 . + 2 ID=cds.g4989.t1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 11085 11230 . + . ID=g4989.t1.exon4;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 11085 11230 . + 2 ID=cds.g4989.t1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 11460 11576 . + . ID=g4989.t1.exon5;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 11460 11576 . + 0 ID=cds.g4989.t1;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS exon 11758 11946 . + . ID=g4989.t1.exon6;Parent=g4989.t1 NODE_997_length_14928_cov_39.6166 AUGUSTUS CDS 11758 11946 . + 0 ID=cds.g4989.t1;Parent=g4989.t1 #PROT g4989.t1 g4989 MATEKAVQLGVEMLRVGLFPGRINTTVHMFRVGNVLIDSGPPNQWHKTKKFIKERGVRRVFLTHHHEDHSGGAARGATDLPDVEFHAPQLTKGFVEDGYEIQMYRRIVWGRPPLYTQKHSFDGWAGKAIEVADDGTKLLPIPVPGHCPDMVAFLEPNRGILFSGDLFITKNPMFARMEENPLEEIESMRRVLKHDFDTMFCSHRGRLDGARKLLSDRLEFLEGIRDRSRELHARGMPVGEISQRLLGKEEWITFISRGHFSKTNMIRHMVASSH* # ORIGINAL: g11027.t1 original gene structure, not modified by PASA NODE_1039_length_14499_cov_42.7511 AUGUSTUS gene 8127 8777 . - . ID=g11027;Name=g11027.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS mRNA 8127 8777 . - . ID=g11027.t1;Parent=g11027;Name=g11027.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 8127 8777 . - . ID=g11027.t1.exon1;Parent=g11027.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 8127 8777 . - 0 ID=cds.g11027.t1;Parent=g11027.t1 #PROT g11027.t1 g11027 MAKSNNCDLDLLPSFQYSDLDLPLVHSSTINFEEVNGYEFAVLVEELDPNVPSMPSGQSVHPNDVEVDGDEDDATDAESDTTEAVDDDEPLPYDVARMSDVDELSSMLNEFRELPGVFTEFDELPSVPNGCERCGQCSKVLKKSSMAYHIQTHGPAIHPCDAPWCRCSRLFKSYASVFMHRRRSSRNPDKLRRNSDKQDLRVTRDGRVDRRRHSDY* # ORIGINAL: g11028.t1 original gene structure, not modified by PASA NODE_1039_length_14499_cov_42.7511 AUGUSTUS gene 10051 11829 . + . ID=g11028;Name=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS mRNA 10051 11829 . + . ID=g11028.t1;Parent=g11028;Name=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 10051 10092 . + . ID=g11028.t1.exon1;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 10051 10092 . + 0 ID=cds.g11028.t1;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 10182 10823 . + . ID=g11028.t1.exon2;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 10182 10823 . + 0 ID=cds.g11028.t1;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 11072 11245 . + . ID=g11028.t1.exon3;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 11072 11245 . + 0 ID=cds.g11028.t1;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 11372 11566 . + . ID=g11028.t1.exon4;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 11372 11566 . + 0 ID=cds.g11028.t1;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 11725 11829 . + . ID=g11028.t1.exon5;Parent=g11028.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 11725 11829 . + 0 ID=cds.g11028.t1;Parent=g11028.t1 #PROT g11028.t1 g11028 MAVPSKKYAALPDIDNAPDVYETADPPAHIETEDEEARFAEGRARAAPEGESEAIRHENVNAFGAYSLFRARELGSSATSRLIAGAGESPVDKLARLRAEIDALEKETAAGGVMASTSAESDLVGAAAEVRALRDRLEHITLGRVSGTPFASVPLSGALEHALAALESGDGNALPGGVVGSGGGVVGAAGQVTYELYYRPEAAKSEKFSALVDLEKRIAAAEATIGRQNGEPLSDALARLRKKIALLDIQTIKDIDRKLRTTATLLDAVSAKRAAAPTLTDGSSEKIDALYGLAMRWDAIAAAVPTIADRLKALEAIHSQRASLASRVARAEAEAQRTNESLAVDLETLVTLKASLAENMGTIKSNMEALDRRIEAIAKKVAGAQ* # PASA_UPDATE: g11025.t1, single gene model update, valid-1, status:[pasa:asmbl_147,status:12], valid-1 NODE_1039_length_14499_cov_42.7511 . gene 62 1168 . + . ID=g11025;Name=g11025.t1 NODE_1039_length_14499_cov_42.7511 . mRNA 62 1168 . + . ID=g11025.t1;Parent=g11025;Name=g11025.t1 NODE_1039_length_14499_cov_42.7511 . exon 62 209 . + . ID=g11025.t1.exon1;Parent=g11025.t1 NODE_1039_length_14499_cov_42.7511 . CDS 62 209 . + 0 ID=cds.g11025.t1;Parent=g11025.t1;5_prime_partial=true NODE_1039_length_14499_cov_42.7511 . exon 415 538 . + . ID=g11025.t1.exon2;Parent=g11025.t1 NODE_1039_length_14499_cov_42.7511 . CDS 415 538 . + 2 ID=cds.g11025.t1;Parent=g11025.t1 NODE_1039_length_14499_cov_42.7511 . exon 681 1168 . + . ID=g11025.t1.exon3;Parent=g11025.t1 NODE_1039_length_14499_cov_42.7511 . CDS 681 762 . + 1 ID=cds.g11025.t1;Parent=g11025.t1 NODE_1039_length_14499_cov_42.7511 . three_prime_UTR 763 1168 . + . ID=g11025.t1.utr3p1;Parent=g11025.t1 #PROT g11025.t1 g11025 WLGVGRLHYGHINRILHHYGFRQGFLVQKVELQADSEARSLPREEEGACAARGRGHPFRRRHGKLEESPPGQPRHLRLDCVCAKAPCRGHGRCASGYPSEPSLKETLDLHEAIVREE* # ORIGINAL: g11026.t1 original gene structure, not modified by PASA NODE_1039_length_14499_cov_42.7511 AUGUSTUS gene 2035 7758 . + . ID=g11026;Name=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS mRNA 2035 7758 . + . ID=g11026.t1;Parent=g11026;Name=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 2035 2211 . + . ID=g11026.t1.exon1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 2035 2211 . + 0 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 2398 2658 . + . ID=g11026.t1.exon2;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 2398 2658 . + 0 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 3426 4225 . + . ID=g11026.t1.exon3;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 3426 4225 . + 0 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 4404 4689 . + . ID=g11026.t1.exon4;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 4404 4689 . + 1 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 5045 5479 . + . ID=g11026.t1.exon5;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 5045 5479 . + 0 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 5773 5923 . + . ID=g11026.t1.exon6;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 5773 5923 . + 0 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 6079 6238 . + . ID=g11026.t1.exon7;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 6079 6238 . + 2 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 6358 6657 . + . ID=g11026.t1.exon8;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 6358 6657 . + 1 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 6792 7000 . + . ID=g11026.t1.exon9;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 6792 7000 . + 1 ID=cds.g11026.t1;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS exon 7178 7758 . + . ID=g11026.t1.exon10;Parent=g11026.t1 NODE_1039_length_14499_cov_42.7511 AUGUSTUS CDS 7178 7758 . + 2 ID=cds.g11026.t1;Parent=g11026.t1 #PROT g11026.t1 g11026 MATDASTSSASVGPFYGLLLKRKQVLTANVRLMVLKCDAAGDAILFYFDPTKEDSSVITNPESALASDTKDRSGKGTKEKGRGSIKLSEWTLTPSPSDGFSIKSLINKTKYLFETCPKDKRAVWPHNTVAGATMLDSAGQFQEKIQRASTFYSKSVGVARNLSASELIDETHWGVLNSYLAKDTNRALEMAILHLLSTYPFTSQTVFTIARSGYDKCLTLLESACRLANNSGFATAKDKTGLRPADIARLSGFKELGKNLDMCCLCETCKTCPDQCTAALRNEHIECFMALRRLQKIEDFKLQTPPIVYAASNRLYGFVRTLIANGFDATESDAVKNTVLHTLAKDLSPESVQAMEFVIAHLREKGDGLSLGIAEASNNLGDTPAHVAAQSGNIDALKALLALGVRVDVVNHMKQTPIDLLENLPSTVDADMRQKKEECRLLIRNTLYPSIRSDCLEIDHKDLLGCGQFGQVYKGTLMPHDVEVAVKILKRENAPKQQASQNQAENELRTEWETMCKKNLRHANVILCHGLATLESGPALVLEYANQGSLLNWLQQRSIRGQTRRDSDASSIEIIEPALVHSFGLQIADAMAYLASRGIVHRDLALRNCLLCFENADDVMNAWQRRHSADVLQALVSATSRNDASLRGNAMATVKIADFGLARAIDTDVGSYQIQNAALKLPVPQRAPESFAISSFSSMSDVFSFGVLLYELWTLGGSLLKGYNLKTYTELEASLREGNRLPRPQACPLGIYNVMRRCFRFQDATRPTFALLSGLLWDVAGMSLRDDGKDTMCTLPSGSSSDAQMRLTALYFDSYLQHVRYDQDLRQVDNPYAFAVLPIYNKATEKIWTVDTSHTWSYGLYPICQSLYDGPHIIGGKPLTVFQFEPTPNGPRTSMDPTSQSLAWLTPLQPHIQLGLATLSIGNVTPLEDILSLDSYGLKKVEVPVPSQPSEWPVAHALHIGAALLALSTNFVHAYRVRSAACKKLPCDLRSLEFSKELQETRKADVWKKMSFKGWYEGKNSDDPMCHIGQYCMCICAEHRQKLSARHIVDESARHIVDDGNLGLSLTNAELKRQLKEVAAAPPSPKDRRSTAAIPAIKTEGDGGLASAAYSAPEDALTP* # PASA_UPDATE: g11029.t1, single gene model update, valid-1, status:[pasa:asmbl_145,status:12],[pasa:asmbl_146,status:12], valid-1 NODE_1039_length_14499_cov_42.7511 . gene 12295 14295 . - . ID=g11029;Name=g11029.t1 NODE_1039_length_14499_cov_42.7511 . mRNA 12295 14295 . - . ID=g11029.t1;Parent=g11029;Name=g11029.t1 NODE_1039_length_14499_cov_42.7511 . exon 14186 14295 . - . ID=g11029.t1.exon1;Parent=g11029.t1 NODE_1039_length_14499_cov_42.7511 . CDS 14186 14295 . - 0 ID=cds.g11029.t1;Parent=g11029.t1;5_prime_partial=true NODE_1039_length_14499_cov_42.7511 . exon 13911 14007 . - . ID=g11029.t1.exon2;Parent=g11029.t1 NODE_1039_length_14499_cov_42.7511 . CDS 13911 14007 . - 1 ID=cds.g11029.t1;Parent=g11029.t1 NODE_1039_length_14499_cov_42.7511 . exon 12295 13787 . - . ID=g11029.t1.exon3;Parent=g11029.t1 NODE_1039_length_14499_cov_42.7511 . CDS 12423 13787 . - 0 ID=cds.g11029.t1;Parent=g11029.t1 NODE_1039_length_14499_cov_42.7511 . three_prime_UTR 12295 12422 . - . ID=g11029.t1.utr3p1;Parent=g11029.t1 #PROT g11029.t1 g11029 GFISGLKDNFGFIETSDREREVFFHYSEFDGSVDELRVGDEVEYASSTRQGKPSAVKVRKLKKGTILSEEVGDVEYSGTVTVAPPSRPSEAANGNTGRIEYTAEAAPEAAPAATNGESGASDENANGDASADTPTPSVCEIAFASSGSRDKRGLKVGDSVRFYIAVHPQTGRRRAVDIKRIKPLHRALVERTKGQYGFIAFKGDEEGDGSLYFHQNDVEDGVELHSGDEVEFGVQVNPRTSKSAAVKVRRVKEAVREAAAPSVRPTTLFRRQAEDDAQGPRFGASRAPKMPDGTRGFDPKIRPSITGGVAAPPAEQQQQEQQQQQQTQQQSDSVATIKSVVDTNAPAAASRAPAPSTTTPAPAAPPAAVSTSTPPVDRKAGDAAVAGKVNGQQQQSQLQQQQQQQQQLLLHQQLQQQQQQQLQQHQLQLQQQHYHAVGQVPYGAYAAPYGVYENYGQFPGSPGAYGYPGFTGFVYPPAYGAPQQAHDPVYQAYLLQQQQQQQQQPQPPQQAQAQSQHGPAQYQ* # PASA_UPDATE: g8058.t1, single gene model update, valid-1, status:[pasa:asmbl_218,status:12], valid-1 NODE_1058_length_14367_cov_42.8878 . gene 6886 9477 . + . ID=g8058;Name=g8058.t1 NODE_1058_length_14367_cov_42.8878 . mRNA 6886 9477 . + . ID=g8058.t1;Parent=g8058;Name=g8058.t1 NODE_1058_length_14367_cov_42.8878 . five_prime_UTR 6886 7289 . + . ID=g8058.t1.utr5p1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . five_prime_UTR 7571 7717 . + . ID=g8058.t1.utr5p2;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 6886 7289 . + . ID=g8058.t1.exon1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 7571 7887 . + . ID=g8058.t1.exon2;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 7718 7887 . + 0 ID=cds.g8058.t1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 8028 8229 . + . ID=g8058.t1.exon3;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 8028 8229 . + 1 ID=cds.g8058.t1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 8319 8838 . + . ID=g8058.t1.exon4;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 8319 8838 . + 0 ID=cds.g8058.t1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 8959 9041 . + . ID=g8058.t1.exon5;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 8959 9041 . + 2 ID=cds.g8058.t1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 9133 9271 . + . ID=g8058.t1.exon6;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 9133 9271 . + 0 ID=cds.g8058.t1;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . exon 9410 9477 . + . ID=g8058.t1.exon7;Parent=g8058.t1 NODE_1058_length_14367_cov_42.8878 . CDS 9410 9477 . + 2 ID=cds.g8058.t1;Parent=g8058.t1 #PROT g8058.t1 g8058 MALQWLRNEFLIYLQAVEDALVFISRSFPRGTVLPRLSPGCHVNHFPRDTELTHKDRLAVTCRDHVSGVHLPRTFVLPEETEAFHDACDRLCQTHWVLKPCNAGEARGIAILSSESARVATIRKVGMKAKRIVACQYVDRPMTVCGFKCDMRLYVLLISDPPVGNGVATPADRSQAIDRRHPLSDVSASHAGARSYRAYIYREGLVRPAAGKYEPLARNGVCAEDDTILLSHVTNNSLTTRVRRDVHERNMPLATILQAFGAPWFSAAWASICHLAASTIDAGLVQMRPAVDSVDIQYPEKRLGFFELFGFDVLLDVTGFAWLMEVNSMPDISGTSVGGAVRREVAYAIKSHLLADMFSLLQLHCSGAPSEESRSTSHFNYDQQNFQQLALEK* # ORIGINAL: g8057.t1 original gene structure, not modified by PASA NODE_1058_length_14367_cov_42.8878 AUGUSTUS gene 167 6614 . - . ID=g8057;Name=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS mRNA 167 6614 . - . ID=g8057.t1;Parent=g8057;Name=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS exon 6372 6614 . - . ID=g8057.t1.exon1;Parent=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS CDS 6372 6614 . - 0 ID=cds.g8057.t1;Parent=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS exon 2304 6236 . - . ID=g8057.t1.exon2;Parent=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS CDS 2304 6236 . - 0 ID=cds.g8057.t1;Parent=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS exon 167 2194 . - . ID=g8057.t1.exon3;Parent=g8057.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS CDS 167 2194 . - 0 ID=cds.g8057.t1;Parent=g8057.t1 #PROT g8057.t1 g8057 MAASSYVSVLSTIEEPAAGLERHKSALDCILALLESDEGLDRLFALNCILRASSNVIRAVVNASVGRRIASLLCEAVVADESLEVRCLASRALGLLLPSLKPHAPWLLTYGFDCLLCHARSLFGPFFEVPPVRAHVNPAVARVDALDVARQYAVLALGCFADSPRAGLHESVEFIDGILHDILSDDSLGTVFLRAQALRMLATCIRPTAATRTRVSAFFLPIKRLDPSLGQSQQGIHPILFKAIALFWSVWFPSAEGVSEEDGSLTDAAREERDRLRRQLLGLANEAVELMPEPGILTFSIGTSGLVFDNPPYQRPLKLTNKHLTETKTFRIQAHPPDIFSVEPSFGSVPPGSSIPVTVKFTPKPDAHPKAVTGYMRVRNRLGFPIERVALKAWNGPLLAVRQDAINCGFCSVEDERHFNLNVTNVCAIAVNCNVLIEGAEEDASAFAIYPPHRLIYPGESKEFEIVFKPSVSGRVIARVIVTCMGGESYTVDVEGEGGQPLEVCDEFVDFGPTDDAGFCQSQSKTPLLHEELPQDGVSAPPGVYVKTLLLKNKDQHMQLPVSFSCASPAVVACINNFVLLEPGASTRVPVFFRPPVNGPWRESMYVIAPNCERVKVELRAFVGPYVSFSCAQDAFFPACRPNERVSLVVPVINHFGADVECHVTGPLENEHFSLETVAAPTAEAKGIEKPHPVKTSPLELNLEKGYAVTMHAHSGAVATVAFVAGSSGLYRFCIRLALAAPHRADYGVLWLHALCLDQDVVADPPMLRLRSLLVNPQDAAHGVTYLAPNAEAEFADELIARPAPPESNNPERRKFVVSPAVAHICASTVSTGESRDLGKVVLTNESTFARKYSLVVSSPFVISRAHAGEIGAQGRFEFAVTMSPAEPGEDDRRIFYGLAVFFDAEGLAMGSACLRGMRGHLVRLLVDCDGDQLWFPRAGIRERLSRTMRLVNRTPFAIPWEVHTRLLADSDEEKAAKSQAPASRTSRGRAKADDAMGPFRWNFRQGVLRPYEGIPVELSFESPVRGEFRCQFDLEYVHPMLEVTAPRMLVRRLLCKCIVGNADVTIKPRAVDFQTVLVGHRATRTLTLTNNSPHDAEVVVGLPLSFNASERQIALGARSEQSVDITFYPRSPMPSAGFVTFLHGTETLHVPVTGRGGTIDIVSDVAAPVPYLPEGCQGTDPHLPATIDFGTMATAMAVVRDVLVTNRGTMDLVVERISAEGNGILKWQFVADEQFAVDDDERVYQEMERAKARITLDDGTPSVSAAHGNRPPAAASSASGSALAQSTPRRRTSVRPPQGQGPSGDGVPVVVRKGYSLFPLVITPHHPLRLRLTVMSIDKGDFMPTLSLWSLLSDAQPFEKIQFMCAACVQPFPTMSTNAIDFGVQPVYTRMRKQFRFTNEGSYPVKWSVPSPLAVTVESHPVKDAHIPFDPKMAGKVFEIFPLQGRLDPGATQSVDVIFGATHPQCKFKAQLAVVTEGLGDGIVELVGVGASSEITATPNVLAFRSIRVGGHRTLDVKLTNCGLLETQYSMGTNSLGFIIDPDTGIIPGGESVVVSVQFWPRAPEKYDATILLTWESGQFRSSSEIKAQGGGGYPEICVESRTLSFGTALLGCLNRCRLFISNKGTAEATIQAMCDRPSLSVEVPGEPGHEITAPPMGSVELDVLYLPTMVEELNTIMMITSPDDPHASFAVTLTGKVGVPKLMFLPPGSFDSLDFDICCIDKTHTRQFSMVNEGNIELSFTLSLMRKAPPSRQRLPNETDAESALLDRADDEAGCVVVINGQRLQPVDSAVFAVEPRFGTLPVASTLPVVVSYSPTVFRELTEAVLVLQNNYQNLISRVRGVGGRAQLEIRTPIRLVDFGLCRENGRFVQEIPISNTGNLPLAYTIAAELERGGGYGWVPPDVLTAPVGDMGLVMLDQSGFAVDAPQGVIAPDTSLTLRVLFTPRCEDEVTRRFRMFHTNGTEDFTVRGRGGAPMLVLYDPQRNAFPPNLPETVFDVGIRPVNTTHMTMFSISNEGSFPLDFFVQPYNVPEFVITPQRGRVRAGETIPLQILFIPKTEQRFQVDLK # ORIGINAL: g8059.t1 original gene structure, not modified by PASA NODE_1058_length_14367_cov_42.8878 AUGUSTUS gene 10192 11475 . - . ID=g8059;Name=g8059.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS mRNA 10192 11475 . - . ID=g8059.t1;Parent=g8059;Name=g8059.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS exon 10192 11475 . - . ID=g8059.t1.exon1;Parent=g8059.t1 NODE_1058_length_14367_cov_42.8878 AUGUSTUS CDS 10192 11475 . - 0 ID=cds.g8059.t1;Parent=g8059.t1 #PROT g8059.t1 g8059 MSPSCGVSYMPNTVLNDRTAHVSGRWRDRLDKAQDGQALVDMSDHTFDGRLQERMANPKTLGTRYVWEPLNSGRPILPTDILRGKWVHSVGDSVSFSMMESFKSVLAGKHGEVRSRCVYVMDSASPVETSDNDVVLHLNKEQCTGDWPYAYVDETCAGGTDARLHIAGATTRRPNYQLFWKITSIPALGATISSQWYQASRPQQGLNLRPPFASFAPWTERYFHDMLDCWRKSSSRQSAGGSVSRERERVNVAHTGKTSATQAVGQSMPDDLRILDSASLDEIFPQNTLPDVVLVNSGLHHASELSCNSYADHVRALLTRARRDFPWNRTRLIWRSTSQTQWRMASLPREHRCRTQYRIEVLNEIARREIALFNEHESTSILPSVAVLDHFQMSLGRDDLAPDNRHYGMPLDGTVIDELLNILGGCQ* # PASA_UPDATE: g817.t1, single gene model update, valid-1, status:[pasa:asmbl_6448,status:12], valid-1 NODE_3717_length_2905_cov_28.6279 . gene 2 2814 . + . ID=g817;Name=g817.t1 NODE_3717_length_2905_cov_28.6279 . mRNA 2 2814 . + . ID=g817.t1;Parent=g817;Name=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 2 73 . + . ID=g817.t1.exon1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 2 73 . + 0 ID=cds.g817.t1;Parent=g817.t1;5_prime_partial=true NODE_3717_length_2905_cov_28.6279 . exon 398 466 . + . ID=g817.t1.exon2;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 398 466 . + 0 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 869 922 . + . ID=g817.t1.exon3;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 869 922 . + 0 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 1162 1325 . + . ID=g817.t1.exon4;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 1162 1325 . + 0 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 1584 1699 . + . ID=g817.t1.exon5;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 1584 1699 . + 1 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 1984 2122 . + . ID=g817.t1.exon6;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 1984 2122 . + 2 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 2313 2388 . + . ID=g817.t1.exon7;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 2313 2388 . + 1 ID=cds.g817.t1;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . exon 2620 2814 . + . ID=g817.t1.exon8;Parent=g817.t1 NODE_3717_length_2905_cov_28.6279 . CDS 2620 2814 . + 0 ID=cds.g817.t1;Parent=g817.t1;3_prime_partial=true #PROT g817.t1 g817 TPDQLESLDCRIMLGNTYHLGQRPGPELLTKMGGLHNFMGWNRSLLTDSGGFQMVSLLALAEINEDGVRFQSPHDGSEMLLTPEKSMGLQAAIGADIMMQLDDVVSSIVTGPRVEEAMHRTIRWLDRCIAAHKNTDRQNLFGILQGGLDPALRAQCIEKMLQRDLPGYAIGGLSGGEEKDKFWRVVNQCATLMPEGKPRYLMGVGYAVDLVVCVALGVDMFDCVYPTRTARFGTALVDSGTMQLRNKRFANDPRPIDEACECSTCKTHTRAFLHIVVNREPVACHLVTVHNVAYQ # ORIGINAL: g9194.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 8506 8844 . + . ID=g9194;Name=g9194.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 8506 8844 . + . ID=g9194.t1;Parent=g9194;Name=g9194.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 8506 8844 . + . ID=g9194.t1.exon1;Parent=g9194.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 8506 8844 . + 0 ID=cds.g9194.t1;Parent=g9194.t1 #PROT g9194.t1 g9194 MAPISAWHCRPFRLITTASPPRLRHTLRRVLRGFRNEPQLRRLLRLLIFCLRESSRAVVAQAQGSADTLALQSADLSVVVEVTANELVTVVARCDPRVLELLLAFLDFASST* # ORIGINAL: g9200.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 29268 30606 . + . ID=g9200;Name=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 29268 30606 . + . ID=g9200.t1;Parent=g9200;Name=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 29268 29902 . + . ID=g9200.t1.exon1;Parent=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 29268 29902 . + 0 ID=cds.g9200.t1;Parent=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 30058 30313 . + . ID=g9200.t1.exon2;Parent=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 30058 30313 . + 1 ID=cds.g9200.t1;Parent=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 30493 30606 . + . ID=g9200.t1.exon3;Parent=g9200.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 30493 30606 . + 0 ID=cds.g9200.t1;Parent=g9200.t1 #PROT g9200.t1 g9200 MWTTLVQTNSERETPFYCSKECKEAAGRSAEHNRKHPTQATESRRSTPSAVQQTVAHTGTVHSARRPSQQGQQQQKQQQQQKQQQQYDQQQRQTKQKTQSQRYQPYARSSVPSDLSDGLQRSRRNGAMRDGGGRSQDSRSRFEGAQLGHYGMSRAHEMDMLSYGIKPWDDEAFDALDIIGTTSVGMSGGSSGFFNNEPCEINEDFLGNTGMGQASAIVALVVGGGVDGSFFNAVQQCLRNAKVRVEVLFVRPQHILKTRVAELVTGGQLRAIIFAGENVDDFGSFPCPDVKKFILPWSLAKCDNTRAYLLSGVAASERLYTCTADAQGTGAVFR* # PASA_UPDATE: g9196.t1, single gene model update, valid-1, status:[pasa:asmbl_532,status:12], valid-1 NODE_113_length_38772_cov_46.3847 . gene 9959 14390 . + . ID=g9196;Name=g9196.t1 NODE_113_length_38772_cov_46.3847 . mRNA 9959 14390 . + . ID=g9196.t1;Parent=g9196;Name=g9196.t1 NODE_113_length_38772_cov_46.3847 . five_prime_UTR 9959 9965 . + . ID=g9196.t1.utr5p1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 9959 10277 . + . ID=g9196.t1.exon1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 9966 10277 . + 0 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 10490 11098 . + . ID=g9196.t1.exon2;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 10490 11098 . + 0 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 11704 12193 . + . ID=g9196.t1.exon3;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 11704 12193 . + 0 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 12536 12692 . + . ID=g9196.t1.exon4;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 12536 12692 . + 2 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 13218 13377 . + . ID=g9196.t1.exon5;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 13218 13377 . + 1 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . exon 13730 14390 . + . ID=g9196.t1.exon6;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . CDS 13730 14338 . + 0 ID=cds.g9196.t1;Parent=g9196.t1 NODE_113_length_38772_cov_46.3847 . three_prime_UTR 14339 14390 . + . ID=g9196.t1.utr3p1;Parent=g9196.t1 #PROT g9196.t1 g9196 MKRIRNGLRMASLRLLVAVFAAALIVCADRTAGRLDWLVPSGAGASNTWPVRIEDGEDGSITLTNGLVSRVFSMEPAFGTVDYVNHQRGESLFRAVKPEASVTLDGRVYAIGGLVQNGPDAYFNATSANLTADASAFLYAGHVTRRPTAPVAWTPGSRHSARKGPWPPEGLTLIVRFAAPEDADPAHRSVHVCVFYEMYAGHPYLSKWIVVYRGDNPGSECASESVGAFNHRRQHEDASAADHGGSFRQHKSAFADAAVVVNHVTVELLATNHAYSPLTFAPYAPSSRASDITSLLSLDATIPHSAALVWTDDSDVDAMPGASEPFLNCTYTSGPGLPLASPGSIFVSYRVLEVIHDSLEPERWSLFRRKMTRLLAPWTTETPVFFHLTDASDAGFRFAVDQMAEVGFEMLIFSFGTSFQMENTDPAYLASLRANVEYARAKGIEVGGYDLIVLDRGHGGDNVGDEYDCIDAVTLTPTVDACLASAWWDKLNGYVFGFLNATGLSMVETDGPYGGTQCASTSHAHHAGLEDSVYQQTMLQAQMYARLRELGIFINQPDNYFYAGGSKTGMGYNENQYSLPRWQDLTISRQSIFEDTYAYIPSQGWMFVPLVDYHGGGDAAAFEPLSVHIHEYEWALAQYLGMGVAACYRGSRLYDTNATREVVTKWVAFYNKYREVLSADIIHVRRPDMRGIDCMLHADAWLEGVKGLAFAFNPTDSALTDTVVLPLYYTGIGEVAIVSEMGGAPQKYALDREFNIDLQVKLGARSFAWFTIESGDAL* # ORIGINAL: g9198.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 20699 25956 . + . ID=g9198;Name=g9198.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 20699 25956 . + . ID=g9198.t1;Parent=g9198;Name=g9198.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 20699 25166 . + . ID=g9198.t1.exon1;Parent=g9198.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 20699 25166 . + 0 ID=cds.g9198.t1;Parent=g9198.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 25442 25956 . + . ID=g9198.t1.exon2;Parent=g9198.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 25442 25956 . + 2 ID=cds.g9198.t1;Parent=g9198.t1 #PROT g9198.t1 g9198 MPTVKIILMCLAAFCWLTVRPCTAALPLDGRVDSVPLPEPGVYEPREAVAVRSTDDDQFVDALNALKDVFDAHVRISAAHQWQTVSWMQLSSALQSIGSNVTVELIGNGLTVHCDGLNDNSLYLSSTHVVLLEGLTITSCGSSIEQSLFDVRGTGSLTFRDVAFVGFTGSLRIVNADDFASVQLTNVSVSSFALVEIPGTIVKMSGSAICVVDKTVVMDMFNIDFGYSQAFRVFTDAYLFVSRSTFQNVVGGIVECAGDKAMAVLLSCSFSETSAKDASIAMAGLTSQRAGVVFIDYCTGHPHANVVDFGGIVAVGGSGKAFIMNSAFVGVSGYEGGFAYGLESSTIVLINVTVVDLYASVVGGTFSGVGYSGDETMNVVAISSRFESMSVDIARYWDTTYGGFGGFFAGDDTNALFDNCVIRNCHSVFRGGVFSLRKSSKVLVVDTTVSEGATDGDGGLAALTDSSLLTLVNSNVTGMSARNGGAISASLEARVTIILSTFDELASEGNGAIMLSDTAQVTIVSSAFSKVSALSGGVFSLTDQSAVMMVNSTISLAHALVEGAVALLQSTAMLFITNSSISGVHASISGGAIRVRNEASATLDHVNVSSTYAAVGGVIHADGNSVINMAYCTFYNTSALRRGASIFLEGSASASVVSSAFVHSQAQRGVGGVVYAIDNARLTFDQCAFIQSSAGTDGGSIYIDDYTLCNVTSSAFIGSHAGGLGGAISASGRSQLILSSCNISSSSAISGGILSVSIESVVVLRSIIGDITSATSGGIAYLSDSATASIADSQFSNLAAKTGGAFATFSSSSCRIVRSTFSSCTAFEQGGFAFVSDSSIFEAATCTLQNVSARRSEKSTGTCSLSSGAAFAVTGGRVVLTELVAIDVSSEGAGGFLSATGNASVLLANSTLARAAAGTNGGLVTVSGGASVVFDTVGAENATAGSHGGCFYVDTDGHLSLDSTIVQGCRAGLAAATFGAGGCAFIAPSGHLQTSASVAVRPKAIRGPGVFSADGSFNAVSLLPSIVGAVGVAPDDSIDWSAGGLLSSEAVTIQISPPAARIDSSGGSVASVMLTVFDAYNSTVSLPGNTPLNFRLVGDWREEAGCENEACTVSGSVSLPTPLGTSPTLRLGTFEVFAPPGSYLLRIVSTNPFVFGDLDENSARRQLLQRTVLNLTVGKCPTGTIGGIGTDSPKIYRCLPLEAAVGMSGGGDQTTVAVAASVVSAVALIAVLVAGGLWRRSVVRLRESEATHHEFVEKHLSQDQSLGRIELSRACIELFETLGEGEFGIVCRSRVVLEDGRPRVCAAKMMKPGASYQERCDFVSEATVMNGLHHPNVVSLCGVVLQSEPMLILLEYVPYGSLLSFVRQILPSQKMSRATSRMLWMFCRQIALGMAYLATVGIVHRDLAARNCMVGQDTFGEYVIKVADFGLSGVLAGKNYFRKGSGKERLPVRWLSPEAMEQRRFTEASDVWAFGVTAWEVFSFGEIPFGTMTSAALVGFVLKGGRLSRPAACQSRDIFDTVISPCWREQPEDRPTFDALVKALTAIVSEEKGGIDKQEMAVMPDLMPDMLNESLYSNVYLDQSMRQLIPTGRKSSYANVVVPTPTPFSPFPNKPSYANLNLANQAVDLPNSAIRDDVDEMNHHPLATVVEMAYTNETAV* # ORIGINAL: g9201.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 32003 32534 . + . ID=g9201;Name=g9201.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 32003 32534 . + . ID=g9201.t1;Parent=g9201;Name=g9201.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 32003 32153 . + . ID=g9201.t1.exon1;Parent=g9201.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 32003 32153 . + 0 ID=cds.g9201.t1;Parent=g9201.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 32368 32534 . + . ID=g9201.t1.exon2;Parent=g9201.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 32368 32534 . + 2 ID=cds.g9201.t1;Parent=g9201.t1 #PROT g9201.t1 g9201 MKVKNIFKIGKGGNDKRGLASSTSTSSASFIGKTLRVGDHNVVIEKSVAEGGFAYVFEARDVSSGAIFALKRVVVDDEKLPLIEKEIAFLVSVQSLHFHLASNIS* # PASA_UPDATE: g9199.t1, single gene model update, valid-1, status:[pasa:asmbl_527,status:3], valid-1 NODE_113_length_38772_cov_46.3847 . gene 26352 28675 . - . ID=g9199;Name=g9199.t1 NODE_113_length_38772_cov_46.3847 . mRNA 26352 28675 . - . ID=g9199.t1;Parent=g9199;Name=g9199.t1 NODE_113_length_38772_cov_46.3847 . five_prime_UTR 28650 28675 . - . ID=g9199.t1.utr5p1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 28562 28675 . - . ID=g9199.t1.exon1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 28562 28649 . - 0 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 28204 28310 . - . ID=g9199.t1.exon2;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 28204 28310 . - 2 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 28004 28086 . - . ID=g9199.t1.exon3;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 28004 28086 . - 0 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 27531 27670 . - . ID=g9199.t1.exon4;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 27531 27670 . - 1 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 27100 27182 . - . ID=g9199.t1.exon5;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 27100 27182 . - 2 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 26646 26750 . - . ID=g9199.t1.exon6;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 26646 26750 . - 0 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . exon 26352 26456 . - . ID=g9199.t1.exon7;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . CDS 26385 26456 . - 0 ID=cds.g9199.t1;Parent=g9199.t1 NODE_113_length_38772_cov_46.3847 . three_prime_UTR 26352 26384 . - . ID=g9199.t1.utr3p1;Parent=g9199.t1 #PROT g9199.t1 g9199 MASSTFLVAFFASTFVLCTVHLACAVKTEGFEHVTCGSAIKLINAQNSLRLHSHEVKYGTGSGQQSVTGVAASDDTNSYWQVRGAHGELCKRGERVPCNSKIRLTHVNTRRNLHTHNFASPLSQNAEVSAFGEGGEGDTGDSWIVECAEPFWFRDEPVRFKSVDTKRYLHCTGTHGFGRPIAGQFEICGFPRANGDNLWRAEEGIYIKYDEPVQAAPEVDEDDDY* # ORIGINAL: g9202.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 32637 37121 . - . ID=g9202;Name=g9202.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 32637 37121 . - . ID=g9202.t1;Parent=g9202;Name=g9202.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 32927 37121 . - . ID=g9202.t1.exon1;Parent=g9202.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 32927 37121 . - 0 ID=cds.g9202.t1;Parent=g9202.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 32637 32689 . - . ID=g9202.t1.exon2;Parent=g9202.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 32637 32689 . - 2 ID=cds.g9202.t1;Parent=g9202.t1 #PROT g9202.t1 g9202 MASRFSFNWRLALKGFLDTNAGSLSADARDFLSGCVASENASGTSDAVVARSHLRRRILDHLAEASLTPGLVMSVCICFRPLLVDLSVRIAASVTEMADLLRHELVCAALARMAQYSAQVGAVLDAYLMSHSTPFHRISVLDATRVLSLPEEILLRICQTSHRMARANPTFFSRWDVSPFYPLLAHPAADIRWYASQFVCASLSLEADARSAFEDAYVFTNPNGAMSSPEEVLALRRLHTAIDEEQAVDQAVLVAQENACADVTEVGDCAALLTADDLHASVVDACGILVYSPLLTAPTKTIGAVSGASVDTVLVRTRTTARGMRALARAVAMRRPVLIEGQTGAGKTSLVTELARMTGNADRLVRIHLGDQSDGKVLLGTYVCGDNPGEFSWQPGALLRAAREGCWLLLEDADLAPPDVLSVLVPLLEKRQLFVAGRSETVDAAPSFRLFATQSLLPNGAPRKGSGAAGGVLSGLWTRLPVDPPTIPELAEIVTARYPSLAAVAGDLVSVYVRTASAVSELRVGRVISARELLKWCQRVVVLGNATKMVSAEFSALKEELFAEAVDCFCAAVTDVNARATLTKTLGSALGLLDARVEQYLASYRPGMHRAQDAYVVGRVSLPIAGEKMLGRGASSEDTHFASMRHSLLLMERIAVAVRMCEPVLLVGETGTGKTTAVQHLADRVGVRLSVMNMSQQSDSADLFGGFRPVDVASMGGPLVDRFDALFGKTFSRKANATFLAKVRESLNSKKWDKLAILFGNALQMVDKRVASAASAGSALPTELLDEWTSFRANVSRFDAQRQRSDSMAFDFVEGALVRAVQRGEWVLLDEINLANPDTLEALNGLLESPTGSIVLTDKGELKPVPRHPSFRLFACMNPATDVGKRDLPMGLRSRMTEIYVDELTDKDDLKAVVEAYLPQSTGSGNARIVDAIVEFYLCARRESASGALTDGANQRPHYSLRTLCRSLGYARLISAQYGIQRALYEGLCMGFVTPLARKCQPRVIALIRTAAGIPSGAGGDAQLRRVPQRPSTEHVLFESFWIESLGEAASSADERGVPSTADPNYILTPSIRENLRNVARVAVTRRHPVLLQGPTSAGKTSMVEYLAKATGHKFVRVNNHEHTDLQEYLGSYASDAMGRLAFREGILVEAVRKGHWLVLDELNLAPTDVLEALNRLLDDNRELFIPETGEKVRPHPHFMLFATQNPPGAYGGRKVLSRAFRNRFVELHFDDIPEDELQTIIEKRCAIPPSYCKRLVEVMRELQVRRSGAKLFAGKHGFITLRDLFRWANRHPQGYDGLAADGYRLLAERVRKGEESEIVKAAIEKHTKATVDPEMLYSCDGSLLYECARRFTAVDGSALGDEFRGIVWTRGFRRLFSLVERCLAHKEPTLLVGETGCAETGNTKTKTNNIKGKA* # ORIGINAL: g9192.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 398 4063 . - . ID=g9192;Name=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 398 4063 . - . ID=g9192.t1;Parent=g9192;Name=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 3083 4063 . - . ID=g9192.t1.exon1;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 3083 4063 . - 0 ID=cds.g9192.t1;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 2574 2890 . - . ID=g9192.t1.exon2;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 2574 2890 . - 0 ID=cds.g9192.t1;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 1013 2291 . - . ID=g9192.t1.exon3;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 1013 2291 . - 1 ID=cds.g9192.t1;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 398 850 . - . ID=g9192.t1.exon4;Parent=g9192.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 398 850 . - 0 ID=cds.g9192.t1;Parent=g9192.t1 #PROT g9192.t1 g9192 MDEPAAMTSTIPLNAGTVYAVVNAEKVIAAGSKDATVQLIKLPTKSSRILKGHTGAVRSLAVHDNILASGSQDGTVRMWDIRSGNSMGRIDAHLGSKVTSVAFSKNGEIIASGSENTIAHWCRHSGRLLSTFGHRGTVLSVVFSKYGTMYSASTDKTVRAWHTSSSDQHCALPALSGTSPAVVTTADFEIKHPDFVSAVSVSSDGLMIATGCLDGVTRLYSVGDKEYSILKELTGHKDGVLATKISPSGKYVASGGKDNVVRLWEIESGACILELTTHTDWVCSVTFGADGATLFSGSVDGNVCVYQLSNFDDDIDNDDFENDAHSEELDGEPSETPTAVDAEVEDEPCETPTAVDAEGTTATHQPPHILAMAPVEIDKLAGHMPASFYVAVRGANDGIRDVTAPLFDKLREATDSVAAQIADCVRRDTLAFGAILANPDNHESAVKSMEEYMRQGLYFPDMTHDSEPPKPTPECMGGLCKVLKAVTSGTTCFDDWKDRIDIVLQKLETASSLAAVAHPEGAAAAHVMASELGIKAASERVQADAYKQALELTARVEDTARTLKSVHSRLQDNEDDNRTSESDAKMERRIVSQLNSFSECVLALDMVSAGADAAHEKFTDQSARTRAEAAKQTQELRTQYIHLEVQACADIARLETAEEDLLRRNEEGMAQNYADWDALHAEKARLADVAAHATPTDTLDGTINMLLAFKSRIRVTEDAEAAALRRSQLNDDKAAHPVACDRAGVWKQRMEALASMYSIAAQMVGVVEQFIIEIHCLVNDAFSERTTQLRQDRQRIRRLYFEHYLRAAEYAADHAQNLRVLLAKNTQKLRKAQTRLIEANTLRVPELKKAAREKLDSVNAFQNCCLGRLETLTAIFDPLEEHPFHAVWREVHPDRSYIDYITGVCTDKAKQLNIIMPALLTSGGVNVESIFEHVTPVLPGQGFEWRRMIMEAASTPMATTSADAIERLTTRVEEEMQLEVTMAADGCGVATAHATAGTDASAAVDDSEE* # PASA_UPDATE: g9197.t1, single gene model update, valid-1, status:[pasa:asmbl_526,status:12], valid-1 NODE_113_length_38772_cov_46.3847 . gene 15004 18489 . - . ID=g9197;Name=g9197.t1 NODE_113_length_38772_cov_46.3847 . mRNA 15004 18489 . - . ID=g9197.t1;Parent=g9197;Name=g9197.t1 NODE_113_length_38772_cov_46.3847 . five_prime_UTR 18453 18489 . - . ID=g9197.t1.utr5p1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 18325 18489 . - . ID=g9197.t1.exon1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 18325 18452 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 18009 18157 . - . ID=g9197.t1.exon2;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 18009 18157 . - 1 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 17822 17910 . - . ID=g9197.t1.exon3;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 17822 17910 . - 2 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 17496 17703 . - . ID=g9197.t1.exon4;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 17496 17703 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 17133 17260 . - . ID=g9197.t1.exon5;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 17133 17260 . - 2 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 16958 17034 . - . ID=g9197.t1.exon6;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 16958 17034 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 16698 16794 . - . ID=g9197.t1.exon7;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 16698 16794 . - 1 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 16246 16416 . - . ID=g9197.t1.exon8;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 16246 16416 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 15814 16032 . - . ID=g9197.t1.exon9;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 15814 16032 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 15390 15575 . - . ID=g9197.t1.exon10;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 15390 15575 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . exon 15004 15150 . - . ID=g9197.t1.exon11;Parent=g9197.t1 NODE_113_length_38772_cov_46.3847 . CDS 15004 15150 . - 0 ID=cds.g9197.t1;Parent=g9197.t1 #PROT g9197.t1 g9197 MASSLISCVTWVARGVAKELPEKVELDPEQLRELIEDAKDDIREHEAEKAAATAHAVEVATSIGRAPRAAITPDELADELAEYDLDNYDNEEDVSLEAITGLKGVSYYSSNADDPYITVKDDEDDDSDLEDFTIRPTDNLILAGQTEDEYSRLEVYVYEEDQDNVYVHHEIILPAFPLCLEWLNYHPGEENAANMVAVGTMNPTIEIWDLDLVDAVQADITLEGAKKKKSKKTKGAVAEAGGEQGHTDAVLGLSWNARNRNLLASASADKTVKLWDIGEEKCIHTYTHHTNKVQAVKWNPAEPTVLLTGSFDRRASVFDSRNPGVVGLYSVPADVEAAIWNPCSPQYFLVSCEDGSVTCHDARTPGGNAVFTIGAHDKPATAIAMSTAVNGLLVTASADKTIKVWDVAGQTPVFVWGMQYKLGPLYGLGFSPDSPLTIAVGGGKGIVKVVDLAESAAVRKRFEDRFAFAPPRAPAAATHDDGEKMDVAEDKREEGDNEDDEREITASSAGGSASAEKKKKKKKKKKASSAAK* # PASA_UPDATE: g9203.t1, single gene model update, valid-1, status:[pasa:asmbl_534,status:12], valid-1 NODE_113_length_38772_cov_46.3847 . gene 37746 38637 . + . ID=g9203;Name=g9203.t1 NODE_113_length_38772_cov_46.3847 . mRNA 37746 38637 . + . ID=g9203.t1;Parent=g9203;Name=g9203.t1 NODE_113_length_38772_cov_46.3847 . five_prime_UTR 37746 37816 . + . ID=g9203.t1.utr5p1;Parent=g9203.t1 NODE_113_length_38772_cov_46.3847 . exon 37746 37909 . + . ID=g9203.t1.exon1;Parent=g9203.t1 NODE_113_length_38772_cov_46.3847 . CDS 37817 37909 . + 0 ID=cds.g9203.t1;Parent=g9203.t1 NODE_113_length_38772_cov_46.3847 . exon 38237 38637 . + . ID=g9203.t1.exon2;Parent=g9203.t1 NODE_113_length_38772_cov_46.3847 . CDS 38237 38637 . + 0 ID=cds.g9203.t1;Parent=g9203.t1;3_prime_partial=true #PROT g9203.t1 g9203 MAVEGPTSVAPSSQSTAPTTASFVGIIYPPPELRIVVDKTAQFVARNGADFENKIRANDTVGKFKFIDPTDPYHAYYAHKVAEAREGKSSDAKDASEGEAKARGVSDVQPTAPVPAAVVAQEQAPADAAPMTRAERAKAKEIVVKNPPPEFQFVADAPSITSID # ORIGINAL: g9193.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 5518 7127 . - . ID=g9193;Name=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 5518 7127 . - . ID=g9193.t1;Parent=g9193;Name=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 7123 7127 . - . ID=g9193.t1.exon1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 7123 7127 . - 0 ID=cds.g9193.t1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 6604 6742 . - . ID=g9193.t1.exon2;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 6604 6742 . - 1 ID=cds.g9193.t1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 6086 6121 . - . ID=g9193.t1.exon3;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 6086 6121 . - 0 ID=cds.g9193.t1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 5875 5912 . - . ID=g9193.t1.exon4;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 5875 5912 . - 0 ID=cds.g9193.t1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 5740 5775 . - . ID=g9193.t1.exon5;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 5740 5775 . - 1 ID=cds.g9193.t1;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 5518 5590 . - . ID=g9193.t1.exon6;Parent=g9193.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 5518 5590 . - 1 ID=cds.g9193.t1;Parent=g9193.t1 #PROT g9193.t1 g9193 MDYYSKAIAIKRAILARFSTVQVTEVSTPNVSGYLEVEVEGGPTLHSKKNGDGYVDSQAKLDRILNGLAPYVNARNRDLLCDSVGHPHPSHARDLLTSGPDFRATTTT* # ORIGINAL: g9195.t1 original gene structure, not modified by PASA NODE_113_length_38772_cov_46.3847 AUGUSTUS gene 9203 9670 . - . ID=g9195;Name=g9195.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS mRNA 9203 9670 . - . ID=g9195.t1;Parent=g9195;Name=g9195.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS exon 9203 9670 . - . ID=g9195.t1.exon1;Parent=g9195.t1 NODE_113_length_38772_cov_46.3847 AUGUSTUS CDS 9203 9670 . - 0 ID=cds.g9195.t1;Parent=g9195.t1 #PROT g9195.t1 g9195 MAASVPQRLRKYVRGASAEQLHIDGGEITRILFSGADAGGRLSLYESILPKGNLAPYHYHEIDVEIFYIIDGQVEFCVDGEVFVAHPGDAVLAGPLVKRRFTAVTDARLIVINSPAGPSEGLMRDIASLAPGQHPPPEMVEKFENVYKIHIVRDE* # ORIGINAL: g7898.t1 original gene structure, not modified by PASA NODE_2119_length_7636_cov_37.699 AUGUSTUS gene 3447 7274 . - . ID=g7898;Name=g7898.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS mRNA 3447 7274 . - . ID=g7898.t1;Parent=g7898;Name=g7898.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS exon 3447 7274 . - . ID=g7898.t1.exon1;Parent=g7898.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS CDS 3447 7274 . - 0 ID=cds.g7898.t1;Parent=g7898.t1 #PROT g7898.t1 g7898 MATTAVLKRTVTLSGHSSRVFSVAFSPDGRTLVTGRNDKTARVWDAATVRRKRTLSGRHSAGVRSVAISPDGRTVATGSNDKTARVWDAATGQCKLTLSEHSGYVYSVAFSPDGLMDATGSDDCTACVWDAATGSQIEVRQESFGGSNWMQSSRNGATNITASHSGCEVILMHDVTVWEERRKREKKEKKRLKQEKEEKERLRREKEAAERAEADRKRASERTVDLVEVGRLLQMAQSHATAQQTHATTLTPHHVTAAQALAAFVAPPLPLCSPETLAHTRQASAEASVSVLATVQHMEATEAALDAAQDALRSHTAADDANAVVDGPSMREAVKSRDAARCAFVWCAQSVLADPRFDTAAITEQMRLVDDQLERLGVALGAEWIRCDGAHGVDAGLAVEDIKTALCAVEEHRVGLAIVVRQSAGAVHVAAAQLGDALTRLGGAFTGGVYVDSPLGIVGLVACLRGTVESHAACVEDYARTHCLSDDVMRRGCAAMHALLQQSRAQLADVEGMVDRWRLRLNAEAEWAVCAVDSESGSGADDGTALSPSLHSLVSEYYTVVGSVHEADFALYLAQYVAKKAAGLGRITLGRAGAAGVRQSTQPITANHESLVTEAEMTLKTAKARMGGLVTQLTCLGRSLFPELHRLVPDILLDWRLAMEGIEVIHRTRADYTGRLRLAVGGSHAVYKAAIGGRECALKEFSLSDGHSQAQFKREVRSLSRLSHPNIVAINAVFFENNESMGVIEMPLYPHTLDTWVADAKPSPVRLREAMRGLLRGIEYVHREGIVHRDIKVQNVFVAEDGRPVLGDFGISKSNDDRRMESTVSMTVAAFTLAYAAPEVMRGEPSTTASDMYAFGLILYDVHFPEEKRAEKWTNGGHVPPSNVPSIEGHAVELRDLIARLTAPDAKTRPSAAVALTHPYFTDAYVSVQEEAVDALVALRRARKEADRQREEAEAVQRNVAAARLRVAMAEREVNADRRSIIAAKEDLDAKERELREQMKKVRESQAEANKRMNEAGRVLHPCKPPSYWDLTDVNAGGVRRVDVTASMGVTIQALMTETCVASDLGIGRDARRGNYRRLVVERVYRIENGRLWRTYALHRDLVGEQPGMASTRVATHRDWQAFDLHAHAGANEVFLWHGTKPSSVGIIEREGFDERVCNLDGMFGAGVYFAEHSSKSDQYTYDRRAGNSTLSMFLCRVALGRTATITQITQGARRPPLLNGANKTTADSVVANCTRKNAHWHVPAPASCIERYREFVVYDRCQCYPEFLVEYRAE* # ORIGINAL: g7897.t1 original gene structure, not modified by PASA NODE_2119_length_7636_cov_37.699 AUGUSTUS gene 212 2204 . - . ID=g7897;Name=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS mRNA 212 2204 . - . ID=g7897.t1;Parent=g7897;Name=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS exon 1686 2204 . - . ID=g7897.t1.exon1;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS CDS 1686 2204 . - 0 ID=cds.g7897.t1;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS exon 1262 1384 . - . ID=g7897.t1.exon2;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS CDS 1262 1384 . - 0 ID=cds.g7897.t1;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS exon 552 950 . - . ID=g7897.t1.exon3;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS CDS 552 950 . - 0 ID=cds.g7897.t1;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS exon 212 317 . - . ID=g7897.t1.exon4;Parent=g7897.t1 NODE_2119_length_7636_cov_37.699 AUGUSTUS CDS 212 317 . - 0 ID=cds.g7897.t1;Parent=g7897.t1 #PROT g7897.t1 g7897 MDAIMEADSLESSDSNKNDANALHSLMDEQPNEELPSSSTQLSLDPATTRESHTSLVELDATLNPVDSLESNTDTDAMPSVSQSTHTAPTHSPISSLSVETEPDAASLLIAPIVSGSSATAAANSAHVTIPSNKRPASTYSENEMMMGSPPTTTIATTGALLFTSGMLTSEAKAFRSDSVLSDGDIDEDEIQVDVDVPEAWNSNGEIMFRIDTKANVSIFRKSGSGAVTVIRKYADFEWLHNTLSDGEDYRGVILPCLPEKPTTGDSTFGKMIGRKNNMDARRADMRRYLSRLASHPAIRLDPIMRRFLSFEGELAVPLRSTADRLGQKLRRFRDRGMSIPRLREYKELDSFFDEQRKFLVNYIVDIRNAKGASENVSSCLT # ORIGINAL: g6821.t1 original gene structure, not modified by PASA NODE_3000_length_4559_cov_42.5856 AUGUSTUS gene 73 2178 . - . ID=g6821;Name=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS mRNA 73 2178 . - . ID=g6821.t1;Parent=g6821;Name=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS exon 2145 2178 . - . ID=g6821.t1.exon1;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS CDS 2145 2178 . - 0 ID=cds.g6821.t1;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS exon 835 1999 . - . ID=g6821.t1.exon2;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS CDS 835 1999 . - 2 ID=cds.g6821.t1;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS exon 439 520 . - . ID=g6821.t1.exon3;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS CDS 439 520 . - 1 ID=cds.g6821.t1;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS exon 73 199 . - . ID=g6821.t1.exon4;Parent=g6821.t1 NODE_3000_length_4559_cov_42.5856 AUGUSTUS CDS 73 199 . - 0 ID=cds.g6821.t1;Parent=g6821.t1 #PROT g6821.t1 g6821 MEGPLNKWTNYVSGWQFRWFVLDGPSGELSYYTGKNRGGKCRGRLSVASMDVALDEGEDSLFSVASGSESYFLRAKSDEERMKWVTAINDAKRKHNQERRASQVPAPTMLPSSPGQSSALPSVPIALTSASLSSLPSGPVPVPATADVGGSRPRAMTVPLHNKLIEAQTYRRLLEQQLEGLYVSLTQNDGAVVQMDASASLAAPDDPRATITVARTTWMAMFRAFDQCLAIVASGEGIEGPRRTSNDALRGRSGSGSDNGSSPGRRPKHRTATVRQKTIEGEDEEDDEFYDANDWMSDGSDGEEEEDEDGSQPPQARADAGGIAGGWSTGPYKDYHPDADDGSDEDGSNNEHKSVILHLLSQLRIGMDLTKVVLPTFILERRSLLEMYADFFAHADFFVTIPDFPDPAGRMLQVVRWYLSSFHVGRKSTVAKKPYNPIIGEKFRCAYNLEDIGCGSLSFIAEQVSHHPP # PASA_UPDATE: g6822.t1, single gene model update, valid-1, status:[pasa:asmbl_5401,status:12], valid-1 NODE_3000_length_4559_cov_42.5856 . gene 2837 4195 . + . ID=g6822;Name=g6822.t1 NODE_3000_length_4559_cov_42.5856 . mRNA 2837 4195 . + . ID=g6822.t1;Parent=g6822;Name=g6822.t1 NODE_3000_length_4559_cov_42.5856 . exon 2837 2896 . + . ID=g6822.t1.exon1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . CDS 2837 2896 . + 0 ID=cds.g6822.t1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . exon 3025 3093 . + . ID=g6822.t1.exon2;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . CDS 3025 3093 . + 0 ID=cds.g6822.t1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . exon 3204 3412 . + . ID=g6822.t1.exon3;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . CDS 3204 3412 . + 0 ID=cds.g6822.t1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . exon 3552 3682 . + . ID=g6822.t1.exon4;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . CDS 3552 3682 . + 1 ID=cds.g6822.t1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . exon 3882 4195 . + . ID=g6822.t1.exon5;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . CDS 3882 3994 . + 2 ID=cds.g6822.t1;Parent=g6822.t1 NODE_3000_length_4559_cov_42.5856 . three_prime_UTR 3995 4195 . + . ID=g6822.t1.utr3p1;Parent=g6822.t1 #PROT g6822.t1 g6822 MATATSYFLVMVSGQLECAQFPDYDNLYCKYCFVYGPDWVVVSGLEEGITQITKRGSAGSTTFVWNFPLDVTFKSTNAHGWPQLLISVYGLDGMGRDVVRGYGSVHTPVAPGRHTRDLAMFVPASSSTLQKLVSWLLGQHPEYVDAKFVTQGEGREVTRVRSQGVVRVAFNVTTKDMRKFGYNSGPSTSGGSS* # PASA_UPDATE: g3422.t1, single gene model update, valid-1, status:[pasa:asmbl_6415,status:12], valid-1 NODE_3695_length_2938_cov_41.6835 . gene 134 2331 . + . ID=g3422;Name=g3422.t1 NODE_3695_length_2938_cov_41.6835 . mRNA 134 2331 . + . ID=g3422.t1;Parent=g3422;Name=g3422.t1 NODE_3695_length_2938_cov_41.6835 . five_prime_UTR 134 190 . + . ID=g3422.t1.utr5p1;Parent=g3422.t1 NODE_3695_length_2938_cov_41.6835 . exon 134 1577 . + . ID=g3422.t1.exon1;Parent=g3422.t1 NODE_3695_length_2938_cov_41.6835 . CDS 191 1577 . + 0 ID=cds.g3422.t1;Parent=g3422.t1 NODE_3695_length_2938_cov_41.6835 . exon 1877 2331 . + . ID=g3422.t1.exon2;Parent=g3422.t1 NODE_3695_length_2938_cov_41.6835 . CDS 1877 2169 . + 2 ID=cds.g3422.t1;Parent=g3422.t1 NODE_3695_length_2938_cov_41.6835 . three_prime_UTR 2170 2331 . + . ID=g3422.t1.utr3p1;Parent=g3422.t1 #PROT g3422.t1 g3422 MALIRVVCEAALVIGVALCFASVGANAQCSSAAADGYIIVATDSDLDALSSCGLISADVLQIGLDSSGQGSCSVTSLTPLSNLERTTGSLTIVGCPSLTDLTALDSLQQVGNDFIIDGTSVTELSGLASLSSVQGRLQIRRNELLSSINGLAALTTVKGEILIELNPQLESIFGFTGLVEALATVKIQQNDKLRSFDGLAGLKTVGSSIRIEGNKALLNLDGLRALQFVALGIVVRSNPSLRSIDGLRNIPGASSIDISSNDKLVDLDGLKGIKTIDGSLVISDNAILASIAGLRSLVKAGTIDIARNPTLTTLEGLRALVETTGYIYVLDNKALVDVSSLRSLSTVGGYLAFESLPVLPVIVGMTSLKSIGDGLYIQSNAILTSIDGLIFLRLVIDGVYIDGNPLLTRIDSLSGITSIGGAVVIDGADALCSASVNAIPWKTLNGGREVTITHTTAAQTCSSSASRTCLDANGLVVGASTAVPTSSSSSSKWPTGAIVAVAIVSTVALTLLVILIAFYIIYSPSRKGYARASGKPTGGPPGSSFDLSQNAEWTNPMRK* # ORIGINAL: g5343.t1 original gene structure, not modified by PASA NODE_2900_length_4808_cov_37.2263 AUGUSTUS gene 2183 4430 . + . ID=g5343;Name=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS mRNA 2183 4430 . + . ID=g5343.t1;Parent=g5343;Name=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS exon 2183 2473 . + . ID=g5343.t1.exon1;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS CDS 2183 2473 . + 0 ID=cds.g5343.t1;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS exon 2718 2777 . + . ID=g5343.t1.exon2;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS CDS 2718 2777 . + 0 ID=cds.g5343.t1;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS exon 3175 3336 . + . ID=g5343.t1.exon3;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS CDS 3175 3336 . + 0 ID=cds.g5343.t1;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS exon 3733 3873 . + . ID=g5343.t1.exon4;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS CDS 3733 3873 . + 0 ID=cds.g5343.t1;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS exon 4296 4430 . + . ID=g5343.t1.exon5;Parent=g5343.t1 NODE_2900_length_4808_cov_37.2263 AUGUSTUS CDS 4296 4430 . + 0 ID=cds.g5343.t1;Parent=g5343.t1 #PROT g5343.t1 g5343 MRSTRVVAVAALAVLFLATSGDSAHHKRGAPIRRNAVVFPEPAWRQRLHAERMQAGISRERHPPGRRDNLLLEKVARAESPDVIPIDGTRNGIEVRRFVFNSDGDLIIPEFTVKRGPVVYAFIIVSHYFGTPVYTVHRSEDYGATYVDQTATVLNNDTITSYIINPVNPTKIVLFGERAVYISTDTGATFSALAGSHGIQESVAHPVVEDYVLGIHENRTTGFSTLFVSSDGGRTFIPRYYDVKDVLWCVVMVAVKAALGRQ* # PASA_UPDATE: g1439.t1, single gene model update, valid-1, status:[pasa:asmbl_6298,status:12], valid-1 NODE_3609_length_3124_cov_37.4359 . gene 183 3005 . - . ID=g1439;Name=g1439.t1 NODE_3609_length_3124_cov_37.4359 . mRNA 183 3005 . - . ID=g1439.t1;Parent=g1439;Name=g1439.t1 NODE_3609_length_3124_cov_37.4359 . exon 2997 3005 . - . ID=g1439.t1.exon1;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . CDS 2997 3005 . - 0 ID=cds.g1439.t1;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . exon 2698 2815 . - . ID=g1439.t1.exon2;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . CDS 2698 2815 . - 0 ID=cds.g1439.t1;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . exon 795 2416 . - . ID=g1439.t1.exon3;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . CDS 795 2416 . - 2 ID=cds.g1439.t1;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . exon 183 407 . - . ID=g1439.t1.exon4;Parent=g1439.t1 NODE_3609_length_3124_cov_37.4359 . CDS 183 407 . - 0 ID=cds.g1439.t1;Parent=g1439.t1;3_prime_partial=true #PROT g1439.t1 g1439 MAGILVPLVLISVIGVLQVVVDHFVSSGDIVALGGALPPAARDTYNTMPCKGINPDGNCFVGQNLFPAPGIAVINASDPVYWDTYIFQAPLYYFSAEDDATRAFLGSSNFDGTTSGLLGQMQPKQMFDLYSIAGSLREWVTPVSYNGYFPVFLESQGPDWLDNQIASNIEQYYRWAPTKQGKISRIYNATYSIDSQSYNEVQEVASRIVQGRFSEVRPFGGIEFGKLNMSAMSSRADAVGRIPFTIVANSFEFDQTGYETQRRSNILTFVSNSVLRTKLGKTGGTNLDPIIRTLIVNMPDVTQKQSVDVVSLAGGFCFSFAASFLLPVFVSNIVKDKQERQLMMMEMSGMKERVYWLITYVYNYLLYMCVLAMIFVTSHGFKMRLFTQSNNFLLFVLFFAWGHAEIMVAFFFSTFFSNAKTSTVVSYLLVIGGVITSNVVQTLEIFPSDTTPNFFYMIYPPFAFYRILYLMNDACGNFRCFGLSELEPGTQLTISFVYLLFGSLVFAILAAYLSLVFPRQYGVPLHPLFCILGPFRRLKAWCSRPSGYKSVATTNSLYEASNDTLVSVDDMGRGRSASAASIVHNEMYIDDDVVEETARIAENRFSEHCPVVIQSILKEYPPRKGGNGRPHVAVRNVSFAVEKGECFGLLGANGAGKT # ORIGINAL: g1827.t1 original gene structure, not modified by PASA NODE_1062_length_14318_cov_42.2139 AUGUSTUS gene 457 2049 . - . ID=g1827;Name=g1827.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS mRNA 457 2049 . - . ID=g1827.t1;Parent=g1827;Name=g1827.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 457 2049 . - . ID=g1827.t1.exon1;Parent=g1827.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 457 2049 . - 0 ID=cds.g1827.t1;Parent=g1827.t1 #PROT g1827.t1 g1827 MAADGSLLRLLWAVLNSERARLSREGGSFRAVHRAAAVNALRAPPNEQLCSVAVQLQPLFPRVEIAHTNVMGLSTPAEATVSVPATVAHARTQLSLGGARSRGARSRGARLAAASLAGRGGGAEGVEARVGHVPRETAPLLMALSSIAALTAAPAAAVWARDELRYLGILDDVAALFLDATNAICAWADGDRDAPIEEAMATAPELDACLRILESSVFPNPANQQHLLDCLDGLVAPSLVRLLTLFPRMVACLPGPLSDDCLADAAGSQSHSQGDGVPPAPHSRVCAWTLDIMLRCLRVLVNLTNNNASGCARVGGAIGAVDAALSAVWDVPSLLPPKLQHDAVSMALCLCVNLVEHSKDNRARMAAARAGRCIPLLAMLFVERATPGVGTSTLPRPSEIGGAAANVSDASAVPTPVHLADGVVANITATATAPPPAHPIAAHPASVDVSTGIPLDAMVVASYVALLLGCLVRDSPANRTQLESSMPDRSLASLSTLLREFLSFQRMAGLAADNEYGRSVNDVIALLESP* # ORIGINAL: g1830.t1 original gene structure, not modified by PASA NODE_1062_length_14318_cov_42.2139 AUGUSTUS gene 10306 12213 . + . ID=g1830;Name=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS mRNA 10306 12213 . + . ID=g1830.t1;Parent=g1830;Name=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 10306 10625 . + . ID=g1830.t1.exon1;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 10306 10625 . + 0 ID=cds.g1830.t1;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 10971 11181 . + . ID=g1830.t1.exon2;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 10971 11181 . + 1 ID=cds.g1830.t1;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 11468 11558 . + . ID=g1830.t1.exon3;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 11468 11558 . + 0 ID=cds.g1830.t1;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 11840 11897 . + . ID=g1830.t1.exon4;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 11840 11897 . + 2 ID=cds.g1830.t1;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 12108 12213 . + . ID=g1830.t1.exon5;Parent=g1830.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 12108 12213 . + 1 ID=cds.g1830.t1;Parent=g1830.t1 #PROT g1830.t1 g1830 MLKGIGVGSEAASATAAAVTWMLRDGTGMVARILFAWYEAGNLDAEAKKWRLTADILNDAAIMMELASPHLPGGFFLPIACISAVARSIVGVAGGATRAVLTRHQARRNNSGDVAAKDGSQETLVNLAALLVGLVMMPLVADHVMLTWALFFVFTAGHVYANYRAVTSVVMDVFNNKRAAIFVRRFVKDGTALSPAEVARLEPLFREVPGTRDITLGASLSHAIGSDCKSTEQAESLLPSLEKENYALFVREDGVSIMCLP* # PASA_UPDATE: g1829.t1, single gene model update, valid-1, status:[pasa:asmbl_235,status:3], valid-1 NODE_1062_length_14318_cov_42.2139 . gene 3823 8197 . + . ID=g1829;Name=g1829.t1 NODE_1062_length_14318_cov_42.2139 . mRNA 3823 8197 . + . ID=g1829.t1;Parent=g1829;Name=g1829.t1 NODE_1062_length_14318_cov_42.2139 . five_prime_UTR 3823 4433 . + . ID=g1829.t1.utr5p1;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . exon 3823 6528 . + . ID=g1829.t1.exon1;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . CDS 4434 6528 . + 0 ID=cds.g1829.t1;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . exon 6676 7268 . + . ID=g1829.t1.exon2;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . CDS 6676 7268 . + 2 ID=cds.g1829.t1;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . exon 7434 8197 . + . ID=g1829.t1.exon3;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . CDS 7434 7874 . + 0 ID=cds.g1829.t1;Parent=g1829.t1 NODE_1062_length_14318_cov_42.2139 . three_prime_UTR 7875 8197 . + . ID=g1829.t1.utr3p1;Parent=g1829.t1 #PROT g1829.t1 g1829 MHRPRCASAASIAFLLFLALVHVRTGSSHAIPKDKSNAGPGEANGPSYPLLRLMEAIETGASHVTPDALANSTLSLYGRYAKEGMAGRRAVPGEPTDCPTGASRQALETLCDGLDNDCDGVVDLLIPVDANACVVAGAKGRCAQGYYQCTAAGRVCIGGSPAPESYNLVDDNCDGLIDNVPTPTYSTASRLALLVPSYIANDLEVLNSVAVLDQWGVPYDRINGDTPVDTALSQLTSLAVYSVVLIPVRVDPTWFTAARASRLTAFANVGGTVVFVRPAGSALALAGIASAQVNLATVTLFRVEDTAKRTFGIFDKFDAREELEIPVVDKDTFGDLKVYMDVYAPSNGAALITAYSEVSTGGAATALGAVAVSTQAGKGRFYAFGHNMYAYYSYRGGYINAFDPAIDLWGLLLRGFLREATQGHAVVKHTVPGPQSAVIYISHDAEWDEPYVKEMNDAAAPYGGKPNFYVQTPVGTNKQQYRDVAAYISKHGASPLMAHSCEHEADFGTQAVGDCSQPPSKIAQAYKANPRTLCGELIVPKYFLESATGVTVTGFRSPYLLIHRQQYVLLKQLGYVVDSSIAISELKTNLPIATEKINVLQFNFNRQALYTMPLQIEDGLVINNIRTDLQAANLPHFLTVWRYVAARIGQNNGHIMLLDHPGIGLNSNDKNDDAKIEASRRMYQFALGNSMLPQNLASLVTWWSAREAANVKATFTTAGRYEGTISAAANKPIKNFALEFSDNILAFTCACCGASTVTRNRVVVASLAGGTSCSFVATVDMNGSVAPPPPSTPASTSTPKASSTVFASSSRLPFSSATPLVSSTTATVSSATPLVSSTKAAPTTPGPAPTATATAAVPTPTSFPACSAPQSVVLVDNFANAARFAARMNIFGGIFTDDGTMNMQRSTSSYLVLQTKTAASHWTMSIVGAACYAVPAADNALTVGLIAPVGIDFDLRLSYRSAGSESACSGSTLSAVVALSAVANNRLLNGARPATVTFPLSLFGAGVRRNAVYSIQMENFRVNGVAGTNAVVSVDAISFAKC* # ORIGINAL: g1828.t1 original gene structure, not modified by PASA NODE_1062_length_14318_cov_42.2139 AUGUSTUS gene 2539 3387 . - . ID=g1828;Name=g1828.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS mRNA 2539 3387 . - . ID=g1828.t1;Parent=g1828;Name=g1828.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS exon 2539 3387 . - . ID=g1828.t1.exon1;Parent=g1828.t1 NODE_1062_length_14318_cov_42.2139 AUGUSTUS CDS 2539 3387 . - 0 ID=cds.g1828.t1;Parent=g1828.t1 #PROT g1828.t1 g1828 MKRVVRTYGRRETQRVVGDASSLAHTCDSSGESAPPSLAYAEQQSQQSEPQTQLSQQSQQSQQSQSQKSPQSQLLSQQPQPKQLTHQPVKVDAAAEAPRRLSPRKRIRAESSDVCVGTSVDADGGSDAASTDAHSPRRSPRRARMEISGEPRVLHERTRASGVVSPSTLQQRQEQQQQQQQQQQQQQQQQHSQSSSVSARDALFGKSRASRKFGGSGMLFGRVDSAGVGVDRDSASQTDAPQPMRGVNESRELGRNLTHFDDIEYILEGLSSTRTSTVRLSR* # ORIGINAL: g3155.t1 original gene structure, not modified by PASA NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS gene 172 2388 . + . ID=g3155;Name=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS mRNA 172 2388 . + . ID=g3155.t1;Parent=g3155;Name=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS exon 172 462 . + . ID=g3155.t1.exon1;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS CDS 172 462 . + 0 ID=cds.g3155.t1;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS exon 734 873 . + . ID=g3155.t1.exon2;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS CDS 734 873 . + 0 ID=cds.g3155.t1;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS exon 1033 1248 . + . ID=g3155.t1.exon3;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS CDS 1033 1248 . + 1 ID=cds.g3155.t1;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS exon 1446 2388 . + . ID=g3155.t1.exon4;Parent=g3155.t1 NODE_3850_length_2629_cov_36.1766_potentialcontaminant AUGUSTUS CDS 1446 2388 . + 1 ID=cds.g3155.t1;Parent=g3155.t1 #PROT g3155.t1 g3155 MDGPFLTLERARARVRELRSFGALVGTATIELRGGVYPVTSTVRFTSEDVSLVILPYANETVSFVGGVLLAASDFGPMPIDVAASLRVPVALRDKACIVSVNLRGVGVANYGSMNRDQSWATVPIELIVRSGGASEYRPAILGRYPNTDYAVSGGALLSANNLTFASSLDARAATWITEADAWVEGYFDSDGSHSYSPLLGVDVASRALLLKPSQKYRPNRRFAVTNALVEVDTPGEYFIDRATMTLYFYPPADGIASAIITTVASLFDMAGSSDVTIRDISFIGSRGTAIYARGSRLQLQRLKVSCAGTDGIDTSTSRDTIVSGCDISWIGGRAVVVVTGNRTLLTSGNVAVSNNKLWSYGRTFKNSAAVDVTGVGATVSRNTIFDGPAAVTCSGNGHVIQRNRIMRVCTERDAGAIYLSGGWTARGSVVVGNSLKMIGLGLPVAATAPAIVLTDLTSGITVSGNLVASSFRGVVVGGGRNNVVANNLFVGTSVALTLDNRGINSGWLAPAVADPSSSIRTALAAMPYQ # ORIGINAL: g11387.t1 original gene structure, not modified by PASA NODE_2408_length_6392_cov_42.7698 AUGUSTUS gene 221 4930 . - . ID=g11387;Name=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS mRNA 221 4930 . - . ID=g11387.t1;Parent=g11387;Name=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 2339 4930 . - . ID=g11387.t1.exon1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 2339 4930 . - 0 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 1783 1860 . - . ID=g11387.t1.exon2;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 1783 1860 . - 0 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 1526 1600 . - . ID=g11387.t1.exon3;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 1526 1600 . - 0 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 1212 1269 . - . ID=g11387.t1.exon4;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 1212 1269 . - 0 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 920 1044 . - . ID=g11387.t1.exon5;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 920 1044 . - 2 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 577 775 . - . ID=g11387.t1.exon6;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 577 775 . - 0 ID=cds.g11387.t1;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS exon 221 387 . - . ID=g11387.t1.exon7;Parent=g11387.t1 NODE_2408_length_6392_cov_42.7698 AUGUSTUS CDS 221 387 . - 2 ID=cds.g11387.t1;Parent=g11387.t1 #PROT g11387.t1 g11387 MSAFLWAVLGFVLGGFAVIGAQLYFVALWFQFYQPSRDNVVSEEVLVRRKEAFVKLTTQQHQKIIELEGSAKAESCVWFNAILANLFTDFRAAPFRVAIEDSLVSSFEELRMTLVGKSLKTIALKEYGIGNGVPVITGIKFLSGDTVVSKPRTESTNSNGGIPSIVVGDDADGLDGSQRRGGMSLPSANEQLLNQKQMPWYHGDVVVDLVYQGSIHFKIEIETILGLVGVLSVSIAQVTGKMLVRLSSDDVSQYNVGFLDEPRMTMEICALLGGKEVASLSKVIDSAVRNLIATRFTLPNIVSYNVRHNPDDGGMTVTTDRLRLSDRASIPLADQVFLPSQLGIAFRDAHCWIVHDFPKGSRCIRCSLLINKIGYYCRDCSYVCHKRCMGRLVSSEVRCPVGLDCGDKGQGNRSAVTAGYTEGGRLHIKVMGASGVASKDVGGTSDPYCIVSVGGQQARTRHIIKTLEPKWNESFEFDIGQRGPWALRLTVFDWDKLGRDDYIGAAVLNVKSLVPGVHFRETVSLHARTGGEDGDSGRITVELMFEEREGNVGGGGGSGGAQVPSSKSMPMLSNYVRQPSSHSLTSNMALLDVAENEDTDGFNMVVVKSSSDYAGQTELSMKVRRHEAIDGFLETEEKYVADLERVVRDYCVPIRQHRPADAAAILGNFEDVTRATRAMLTFLRESKAKQVSWGSVRIGEAFTTGKLGFFDALAEYCSARGRCAAEYAARTQADRGLREELRSLGLAVPDVPDDATSTSSNRGTTPSASSSSGGASAPLKPGLWALLSSQNGSRANLSSSINGAFSLLDHTVMPERRIMDYSSLLRRVIMMTVPENPDYIHLADALSRVGEMESVLKSRKSTLMAEAIDLHDDSRSVVYEGQLRVESGKQVDVVLLDNVILLIVDDVPGGRLYKMPFLLDETAVNGNIIGVDGKEIASAFALTCDDVHLILRAESGAVKHKWVGLIVATSKAYSAQTGMEGPGNDRGQVSMGGGDDEGGEDEARRSSKLLKSLSLDPNSHVALQSRRRAVTNPHSVVQTAHDVMSGSSKKTKEQRKLQGVRDDHQGLMSELRVVMSVSRDRKQKLKELVGVSDGADGK # ORIGINAL: g2747.t1 original gene structure, not modified by PASA NODE_5741_length_732_cov_72.895_potentialcontaminant AUGUSTUS gene 2 732 . + . ID=g2747;Name=g2747.t1 NODE_5741_length_732_cov_72.895_potentialcontaminant AUGUSTUS mRNA 2 732 . + . ID=g2747.t1;Parent=g2747;Name=g2747.t1 NODE_5741_length_732_cov_72.895_potentialcontaminant AUGUSTUS exon 2 732 . + . ID=g2747.t1.exon1;Parent=g2747.t1 NODE_5741_length_732_cov_72.895_potentialcontaminant AUGUSTUS CDS 2 732 . + 0 ID=cds.g2747.t1;Parent=g2747.t1 #PROT g2747.t1 g2747 HRETYTIKVDGERCIDVSYVPLNILSGIPFRTYDGVKFVDIEFLYIDMYRVYNDLLFSANRLEKVYKREQLLMSTFGSAQSGQVVGQSGKIQLNPEHVSILKELFDKFVQPEGKIITGIDAYNMYLRKSEVRDAEEYVLPNDHFEVVSFDLKGDWQKITQVLAKYMKNVRKEEYVPFFQFTGHRLSVYHKDVPVIVLVDSHKRCIPFRTVDDIKVVSFDYLVMLLYIGIARARIPLFCGTDSQ # ORIGINAL: g12845.t1 original gene structure, not modified by PASA NODE_3585_length_3157_cov_34.6947 AUGUSTUS gene 1054 3012 . - . ID=g12845;Name=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS mRNA 1054 3012 . - . ID=g12845.t1;Parent=g12845;Name=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 2961 3012 . - . ID=g12845.t1.exon1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 2961 3012 . - 0 ID=cds.g12845.t1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 2397 2490 . - . ID=g12845.t1.exon2;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 2397 2490 . - 2 ID=cds.g12845.t1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 2091 2172 . - . ID=g12845.t1.exon3;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 2091 2172 . - 1 ID=cds.g12845.t1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 1732 1836 . - . ID=g12845.t1.exon4;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 1732 1836 . - 0 ID=cds.g12845.t1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 1382 1454 . - . ID=g12845.t1.exon5;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 1382 1454 . - 0 ID=cds.g12845.t1;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS exon 1054 1187 . - . ID=g12845.t1.exon6;Parent=g12845.t1 NODE_3585_length_3157_cov_34.6947 AUGUSTUS CDS 1054 1187 . - 2 ID=cds.g12845.t1;Parent=g12845.t1 #PROT g12845.t1 g12845 MRGSNTCELVFEDCHVPAENVLGHLNKGVYVLMSGLDLERCVLAAGPVGLMQAAMDITLPYVHTREQFGQKIGTFQLLQGKLADMYTRLTTSRVYLYNVARACDNGHIDPKDCAAVILYNAESATQVALDAIQCLGGNGYINDYPTGRILRDAKLYEIGAGTSEIRRMVIGRAFNAMYK* # PASA_UPDATE: g12844.t1, single gene model update, valid-1, status:[pasa:asmbl_6247,status:12], valid-1 NODE_3585_length_3157_cov_34.6947 . gene 176 524 . - . ID=g12844;Name=g12844.t1 NODE_3585_length_3157_cov_34.6947 . mRNA 176 524 . - . ID=g12844.t1;Parent=g12844;Name=g12844.t1 NODE_3585_length_3157_cov_34.6947 . five_prime_UTR 452 524 . - . ID=g12844.t1.utr5p1;Parent=g12844.t1 NODE_3585_length_3157_cov_34.6947 . exon 176 524 . - . ID=g12844.t1.exon1;Parent=g12844.t1 NODE_3585_length_3157_cov_34.6947 . CDS 176 451 . - 0 ID=cds.g12844.t1;Parent=g12844.t1;3_prime_partial=true #PROT g12844.t1 g12844 MAQISLGVAVLVASMLAGSAVAQLGCVGDDGKAVDWWIAVKFPKVSGADDVSAAKGVGYMYMDTANTNFRIPNKGLDDVTSAPGRTVQQVLD # PASA_UPDATE: g8964.t1, single gene model update, valid-1, status:[pasa:asmbl_4640,status:12], valid-1 NODE_2607_length_5696_cov_42.3007 . gene 2342 5374 . - . ID=g8964;Name=g8964.t1 NODE_2607_length_5696_cov_42.3007 . mRNA 2342 5374 . - . ID=g8964.t1;Parent=g8964;Name=g8964.t1 NODE_2607_length_5696_cov_42.3007 . exon 4594 5374 . - . ID=g8964.t1.exon1;Parent=g8964.t1 NODE_2607_length_5696_cov_42.3007 . CDS 4594 5374 . - 0 ID=cds.g8964.t1;Parent=g8964.t1 NODE_2607_length_5696_cov_42.3007 . exon 2342 4442 . - . ID=g8964.t1.exon2;Parent=g8964.t1 NODE_2607_length_5696_cov_42.3007 . CDS 2461 4442 . - 2 ID=cds.g8964.t1;Parent=g8964.t1 NODE_2607_length_5696_cov_42.3007 . three_prime_UTR 2342 2460 . - . ID=g8964.t1.utr3p1;Parent=g8964.t1 #PROT g8964.t1 g8964 MPRGRGRRGGGGGGGGGGGGGGGSRRQSDGGGRGGRGGGGRGRGRNRDDDRNNGNRKRMSDPGDVAHYQRIWWDQYSQGHGNRGAPLDDSLVGAHYKGKRRSFPGNQSNPRAEFHFNYNGDDAPGSTVGLFRDGVAGGGQTGTHIRGSIPNLSRLANGEKVRRHSWMGERMNTSSDDEDSDEDDDDSDDDGLDAVALSDVSVDDIAGDEDDEDDEDGSGEEDEEGSTGGSESDVEDSDDDSSGSSGTDENEFYDSLDKLQGMSGGASASEPFQLFFYEDRTGDRPAVDGSNPMSDALAVAASAVNAQENRPAVPALKKKGDGRDAVSRQEVFIPLEVVTGGKRKGKGKDKKDGKAKGRKGKRDLANAYNSTSGRSRNPNRPVWASDHSGTDDSDDEEAIRDYMANAYNIDESGHARVTELVSGMNLDNMSSDDDDGGEADAIAAALDAQFGGRQGASKRQKKRLALMADFGVIDSDSPHNGRGRRGRGGSSRGGTPRGGGGGRQSRGGEQRPPSKAAFKASREIVSRAQMDKFKWVASSDGPLNKHPGVGGVILAMAPANGVLVASDAGGRTSAAVLVEAVVGGDADDQMDSVFAANNAGMDVDVDSDDSDDSDADHRGNGLGFRPWKNAKGGEYDDDDADMDAEERKFQAIARGCFEQGANVQYDMYADNGRTSSPRGFKSRLKLARDEGRKRHLSEGDGQYDYPDNKKRMRRGEKKRAAAAAMSPGSNLSSMDIGSVVRLLREFVDNPRMDKMPLPPMGRKQRRQVHTLASLYRLQSRSHGSGQRRYPVLFKTRATGLPSEYELEVAVSRLRAEVPNERADRYDRADKYDRRDSKGSRRGQGGKGTAVAAVVVGGGPAPRTGGVVGERAAPIPESNVGNKMLRAMGWRPGDGLGVASDGISAPIEAFVRPHRRGLGLE* # ORIGINAL: g8963.t1 original gene structure, not modified by PASA NODE_2607_length_5696_cov_42.3007 AUGUSTUS gene 77 2054 . + . ID=g8963;Name=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS mRNA 77 2054 . + . ID=g8963.t1;Parent=g8963;Name=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS exon 77 141 . + . ID=g8963.t1.exon1;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS CDS 77 141 . + 2 ID=cds.g8963.t1;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS exon 250 957 . + . ID=g8963.t1.exon2;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS CDS 250 957 . + 0 ID=cds.g8963.t1;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS exon 1063 1125 . + . ID=g8963.t1.exon3;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS CDS 1063 1125 . + 0 ID=cds.g8963.t1;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS exon 1281 1660 . + . ID=g8963.t1.exon4;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS CDS 1281 1660 . + 0 ID=cds.g8963.t1;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS exon 1832 2054 . + . ID=g8963.t1.exon5;Parent=g8963.t1 NODE_2607_length_5696_cov_42.3007 AUGUSTUS CDS 1832 2054 . + 1 ID=cds.g8963.t1;Parent=g8963.t1 #PROT g8963.t1 g8963 EIARRHLGLSDPKLAFTHDEVRAIQCAIGKADYAAALSRRCQDFERALAALAHDQRTPKADTRTVTSSPSHNGGASVRAGNVAPRRRLLADEGASPSLYESARKRPRIMLDEGCGQQESEEDNYGDGMDGLMGHDRYGDDESVRRDPRSGKRADMRGNEQSLLDDAALTRGRNSQTHVLFATSERRGNDSVVGEGEKELGGLTLAELREQLRVTTLQLELMERADTAAFDYARVTMPSLWPLYAGVSQSVFGASHLAMTQALYSSECSDGMPRAESVKILLAEMARFVDARGRLVSLRKDVDAADRSAAYDTACTPTDEHSHPHQRSNTMGALLSLRQNVSASTTRLSVFSARRSALLWAWKQASASHFSSLTCASGELSLLYAKAVAIASDCDAGSPHLLVLRSIPSRTSNSNAHADAGHGSDTSGETRMNEPVGRNIGSHAPSIHSRLLSMEDLLQVRQKVTLVRHFYKSASETLL* # PASA_UPDATE: g13676.t1, single gene model update, valid-1, status:[pasa:asmbl_936,status:12],[pasa:asmbl_937,status:12],[pasa:asmbl_938,status:12], valid-1 NODE_1244_length_12781_cov_40.7278 . gene 6579 12696 . + . ID=g13676;Name=g13676.t1 NODE_1244_length_12781_cov_40.7278 . mRNA 6579 12696 . + . ID=g13676.t1;Parent=g13676;Name=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 6579 6725 . + . ID=g13676.t1.exon1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 6579 6725 . + 0 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 6986 8781 . + . ID=g13676.t1.exon2;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 6986 8781 . + 0 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 8982 9372 . + . ID=g13676.t1.exon3;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 8982 9372 . + 1 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 9527 9663 . + . ID=g13676.t1.exon4;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 9527 9663 . + 0 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 9874 10046 . + . ID=g13676.t1.exon5;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 9874 10046 . + 1 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 10245 10676 . + . ID=g13676.t1.exon6;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 10245 10676 . + 2 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 10812 10962 . + . ID=g13676.t1.exon7;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 10812 10962 . + 2 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 11244 11442 . + . ID=g13676.t1.exon8;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 11244 11442 . + 1 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 11722 11908 . + . ID=g13676.t1.exon9;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 11722 11908 . + 0 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 12115 12177 . + . ID=g13676.t1.exon10;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 12115 12177 . + 2 ID=cds.g13676.t1;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . exon 12293 12696 . + . ID=g13676.t1.exon11;Parent=g13676.t1 NODE_1244_length_12781_cov_40.7278 . CDS 12293 12696 . + 2 ID=cds.g13676.t1;Parent=g13676.t1 #PROT g13676.t1 g13676 MKSVVVRSPTEGIMAHSPPRVVALPNVDELIPPARSKSSKSAPASGKAVNSAWRSRDRLTKPSLGSLIRDIHECVQGVRNAHGAGAKVEHMRALAEIVARGGDCPRLVFKEGAVPAVLNAMRVYPTHTSLQLQAAALLAGLTPLCDAEHAIYKEGGISLLLGVIDTLYHAQVKYRGAYAGDANGGGGFGTHDDVGDEDEQSGYLPNSAQLNLSAHGHNIHTALNSDSGGAVNGVTMPLFGGTLSSSQTPPAVTGVSPGGILGNAFELPRLSGREAREQSPVSSPTRASRSRSASEKIAPSHGNVLGSVNVSLASASVSSPLVSRTRRSSDPTSSDNNNNNNNNNKSGVVVVPVPTTTSPSPPPNNRPSTGHTVTIAPTASVIIVEADDVPELRPTPVTVGGGLMGGSTGAVGSAMTLSTAPVAGRRSSNYARKSSLDHSQQPQPGALSAGPSLTVSGLGGRKASSVNLSLLRRPSVNPAAGAQTDDSAAARRRALRKGSTESGLENDVTRTLSMLFQEHVHGTVREGFFDDPSELMSKLEGMDSDERYRCLTYMALILSRMGRLIAATNGLSAELSLDIAMDVLVNHARKILDAERATAFMVDDDMNELWSISCTDSDAKKITVPLGKDIAGYVAATGETVNIEDAYKDPRFDAMSDRRDNVHTHAILCVPVMSRVRKGHKRKVLAVLVAVNKRGSETRFDSEDELFLRLLSNQAGMIIQNFLDYHMILKTQKKFNVLLDTTRSLSSEVELDNLIQLIMQSASTLLDADRCTIFIVDKDELWTNILDNRGQVKEIRINRDAGIAGAVATTGKILNIADAYADDRFNRSVDMKTGYRTKTILCMPIRNQTGEIIGVIQMINKTTPGPFNKDDEQLLNAFSSQAAVAIEKSKLFQKSTQMRRYLENILGSINSTVLTLSQSGNLVTCNRDSIISYLQKPSPYMLSHPFRDWLGEDNKALCDDIDTVFATGKPMFVTDYILRGPSGSVEVNYSLAPLEDQSSKKGSNYWAFVKGAVNKLKTLPQFKDPNPMPRNSEFELHLKTMYQISRQWRVQHEATGVVVVLEDISKEKKMMNTLGRYMSPSLAKQVLEEGGQKLGGTRQKVSVLFSDIRSFTKLSESLDPRELVDMLNEYFECAVDAIMANNGILDKYIGDSVMAVFGVPFVTSDDTHRACMTALQMRRNFEVFNGRRMEKGDPPIGYGIGINTGEVVNGNIGSEKRMEYTVIGDGVNLASRVEGITKTYGVKILITEFTYLEVPDHFHVREVDRVRVVGKNKPIAVYELLAEADVTLPPEVVSLVNRYAAALASMRGRMWADAISGFAACLDLHPADGPSRVMLDRCTQLQLNPPDESWDGVYNAESK* # ORIGINAL: g13675.t1 original gene structure, not modified by PASA NODE_1244_length_12781_cov_40.7278 AUGUSTUS gene 2988 5165 . - . ID=g13675;Name=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS mRNA 2988 5165 . - . ID=g13675.t1;Parent=g13675;Name=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 4923 5165 . - . ID=g13675.t1.exon1;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 4923 5165 . - 0 ID=cds.g13675.t1;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 4566 4802 . - . ID=g13675.t1.exon2;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 4566 4802 . - 0 ID=cds.g13675.t1;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 4129 4464 . - . ID=g13675.t1.exon3;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 4129 4464 . - 0 ID=cds.g13675.t1;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 2988 3824 . - . ID=g13675.t1.exon4;Parent=g13675.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 2988 3824 . - 0 ID=cds.g13675.t1;Parent=g13675.t1 #PROT g13675.t1 g13675 MATPDISSLSLTGDSSAMSIDEKVNLIKRNLQETLGEDQMRAIIKDRDLKLYWGTATTGKPHVGYFVPMSKIADFLRAGCQVTILFADLHAYLDNMKAPWELLELRTQYYAAIIKAMLRSVGVNIDKLTFVRGTDYQLSREYTLDVYRLSSVVTEHDAKKAGAEVVKQVESPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFVFAEKYMPQLGYKKRVHLMNPMVPGLAGAKMSSSEPDSKIDLLDDPKSVQNKIKKAFCEEGNIENNGVLSFVKMVLMPLASLRGETTFTVRRPEKFGGDIEFANFEALEIAFRDRVIYPLDLKNAVAEELNKLLEPIRREFDTPELKKLTSLAYPSAEKVEKKGGKEPAAAGGASKEAERPADVSRVDIRVGRIIKADKHPDADSLYVEQIDVGEAQPRTVISGLAKFIPLEQLQGVDVLVVCNLKPANMRGIQSQAMVLAASNADHTAIELLIPPAGSLPGDRVTVEGFPGTPDDQLNPKKKIFEAVSEELSTGDDLVATYRGKPLATPKGVVVAKSLKNAKIR* # ORIGINAL: g13674.t1 original gene structure, not modified by PASA NODE_1244_length_12781_cov_40.7278 AUGUSTUS gene 228 2138 . + . ID=g13674;Name=g13674.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS mRNA 228 2138 . + . ID=g13674.t1;Parent=g13674;Name=g13674.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 228 242 . + . ID=g13674.t1.exon1;Parent=g13674.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 228 242 . + 0 ID=cds.g13674.t1;Parent=g13674.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS exon 591 2138 . + . ID=g13674.t1.exon2;Parent=g13674.t1 NODE_1244_length_12781_cov_40.7278 AUGUSTUS CDS 591 2138 . + 0 ID=cds.g13674.t1;Parent=g13674.t1 #PROT g13674.t1 g13674 MADDWGDFGSFTSAADAAARPHAAPAAHDDWGDFSAFSASAQPAHAPAPTTSHAPAPTPAPADGWGGFSSFAAAPVQPVESVPHPSTPVRTASVGTAPSTPIGYGHAPAATPATSGGWGAPTPHTPVPAASPFVQSHAAPGPSPFAPAQTHAPVSHAPSPSPYAHAQPQQPAAAAHVAPQPQHPPQPQHAQAQRPLSSSSAAPTAAAAPASAASDARVAALERERVRLQQELDGANARGKRIDDELSHVRADLQRTQQQLTEASRAGDAAVVRLREAGSAGLAVALEEQRAALRAAVAEERERGLAALRDFAAAEAARSKSAADDVAASARVAVDAAIEESRRKVADAAAEAKERVTQAVDAAVALERESLSARLSALLEEQKAGVRAAFAAELAAERERTSQLAADGVAEAVAVARRQFEEASLLESSRTDEMLARFRSSLDALVGDARRACEQAAELAASRAEARAAAQAAAREARRQQSVAGVASLLAAAQQQIASLSVEDAESAPTQETAQPPAEF* # PASA_UPDATE: g4430.t1, single gene model update, valid-1, status:[pasa:asmbl_917,status:12], valid-1 NODE_123_length_37279_cov_42.951 . gene 3591 8576 . + . ID=g4430;Name=g4430.t1 NODE_123_length_37279_cov_42.951 . mRNA 3591 8576 . + . ID=g4430.t1;Parent=g4430;Name=g4430.t1 NODE_123_length_37279_cov_42.951 . exon 3591 8576 . + . ID=g4430.t1.exon1;Parent=g4430.t1 NODE_123_length_37279_cov_42.951 . CDS 3591 8576 . + 0 ID=cds.g4430.t1;Parent=g4430.t1 #PROT g4430.t1 g4430 MDARMFSTGAMYQFIPQQQARMQTAFAANSVGAWNTLTDANYAIADGYSPGFTTRTLRDHMGTPKRPAGAVRTHSQQRPQDQPRSRPRSAVGLVSTKRVGGGSPSYGVRLIPVTSTGGGFAVPMPGMGRRPSSAQSMAKRTLWKRAGASSGGSGGGDADVVTYESHPAPLSAPGQQQVLVDNTRQLSEQQHQRTTSALYANRPEVGTAGDPRAPSVPQQRNAVRMRDIQQQRTFPEIVARGSGGGGLGSGSGGSLAGSGGAGSVRTVRRPSLSSTVGSNGGEMPLRPGQYQQQQQPYRPADPPAHLAFDGGDGMSGDGVDDEVLYRDDDRNDQRDYLEYDEDYGRDARRHFPVGPPVDRSAGHDAPWRRDPREQRVGGKTVSFENPVQSHYASTHGDGGWDEEDDGSERMDYVDQYDAHDDEPSPAVLDRQYWEQESARLEAKLQRNGKRRKEDINATPGSASANTASQPPATAVPMLPHAADGRDDSSSAGDSLSLVDLAKEMAAMREELNATRDQLAVAERALSASAGSGAALSVNKGEGVHTKSDKGDRARRRRRSRDRSERRSANESEYSASEVDAPSPLPVVRPRSPTEDGEGSRNHTTGAVGGAHSDSASPNGGTATSLLTVGYGEVGNSSIDSLLSDKDSPRTSRRSKERRHRQRPSASAPPSSSPGLLASETREPVIVIAVPVDAEIPTVVETPPSQPSMDAAGMLSWLPPDACPHVLTFVVRRSDGEEHLVDGLSFDIRGTSMRPGMHYSFRVAVATATDGSSHGPFSRPSATFKIAEPPRLIAAARKRSHTGEEEGVHVVGSGGRGLDGASTQDIPARNDASDALQSSASKGKTYSPILAAIAIPPTGDPPRGRRFRRKDSHDALIVDGASVSSLTDAEDGAQPPDASERTAANVHCDTAAVVPQQLLTRDHTTVASGSWDGDAHTHAPVSAASATVIAPGIPLQLAKAGLISTGRDSPQLQMHIHTGHSTTFAARVDASGSASSASTKAADPTELSRDEGVDRGQATDAAVEDKAHPAQSSPPPQNRVLLAPDSGGHLARVAYGSSVGESYTHAPQNRGVKLGSDLPDTPKSTKGARVTFLLPSGRDHEPAHPVDTSSPRTQERPHQRPLPQLSPVSQPPMRQPDRNVARDAHNNGSNSGSNSGSNSGSNSAGNGGSNCGTNSGSNSGGNEAVSNLPSHRSNSGSGQQAPTVDKPAASGASVLRRPDAQPQHAPPPTQHSPQRTPGTHVPASPAAVSVGLAAVSLPPKPLPDVRTVSAAVGVETAGKSATDEDTSHHDDHSNDDDSDDDDDDDDDDSDDDDDDDDDSNDDDDDETDFTDETDSLGSSETDVGAPRGVPVHVTDKGSGIAAEAAFTQSKTASGNGVILAPLSLPPVGAPDAGVNSVAIASPDARGPRVQDELLNIVHVAPLEGARPASARPLPQFAQMPPRALDSPRVPSERDEMPHIAAVPQATPATSKATGSTAIARSYAFPVPLASSAGASPAELTGVASHQRMPPPGAMGHVTMTPMPLLMSRLPLLTTTARQTGLRLCERLVELPRLIADRRRLINEAGNLSALFQQFVGEVGRVRDQAVYEGDVQKASNVAAFLDASKCFRDALMAFLASPPSVSADSVDASLALHDRRRKDVLTATGELLRQTVALTDAVGSAP* # PASA_UPDATE: g4432.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_923,status:12], valid-1 # PASA_UPDATE: g4432.t1, single gene model update, valid-1, status:[pasa:asmbl_921,status:12], valid-1 # PASA_UPDATE: g4432.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_922,status:12], valid-1 NODE_123_length_37279_cov_42.951 . gene 11146 11916 . + . ID=g4432;Name=g4432.t1 NODE_123_length_37279_cov_42.951 . mRNA 11146 11916 . + . ID=g4432.t1.1.5b6be70a;Parent=g4432;Name=g4432.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 11146 11248 . + . ID=g4432.t1.1.5b6be70a.utr5p1;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . five_prime_UTR 11492 11516 . + . ID=g4432.t1.1.5b6be70a.utr5p2;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 11146 11248 . + . ID=g4432.t1.1.5b6be70a.exon1;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 11492 11555 . + . ID=g4432.t1.1.5b6be70a.exon2;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 11517 11555 . + 0 ID=cds.g4432.t1.1.5b6be70a;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 11760 11916 . + . ID=g4432.t1.1.5b6be70a.exon3;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 11760 11885 . + 0 ID=cds.g4432.t1.1.5b6be70a;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . three_prime_UTR 11886 11916 . + . ID=g4432.t1.1.5b6be70a.utr3p1;Parent=g4432.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . mRNA 11146 11916 . + . ID=g4432.t1;Parent=g4432;Name=g4432.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 11146 11326 . + . ID=g4432.t1.utr5p1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . exon 11146 11361 . + . ID=g4432.t1.exon1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . CDS 11327 11361 . + 0 ID=cds.g4432.t1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . exon 11492 11555 . + . ID=g4432.t1.exon2;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . CDS 11492 11555 . + 1 ID=cds.g4432.t1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . exon 11760 11916 . + . ID=g4432.t1.exon3;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . CDS 11760 11885 . + 0 ID=cds.g4432.t1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 11886 11916 . + . ID=g4432.t1.utr3p1;Parent=g4432.t1 NODE_123_length_37279_cov_42.951 . mRNA 11146 11916 . + . ID=g4432.t1.2.5b6be70a;Parent=g4432;Name=g4432.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 11146 11516 . + . ID=g4432.t1.2.5b6be70a.utr5p1;Parent=g4432.t1.2.5b6be70a NODE_123_length_37279_cov_42.951 . exon 11146 11555 . + . ID=g4432.t1.2.5b6be70a.exon1;Parent=g4432.t1.2.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 11517 11555 . + 0 ID=cds.g4432.t1.2.5b6be70a;Parent=g4432.t1.2.5b6be70a NODE_123_length_37279_cov_42.951 . exon 11760 11916 . + . ID=g4432.t1.2.5b6be70a.exon2;Parent=g4432.t1.2.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 11760 11885 . + 0 ID=cds.g4432.t1.2.5b6be70a;Parent=g4432.t1.2.5b6be70a NODE_123_length_37279_cov_42.951 . three_prime_UTR 11886 11916 . + . ID=g4432.t1.2.5b6be70a.utr3p1;Parent=g4432.t1.2.5b6be70a #PROT g4432.t1.1.5b6be70a g4432 MHLDANKRRFVVKDMDERHILVKKEAMEFVRKELDRMLDDNTFSAAERISRSIT* #PROT g4432.t1 g4432 MVEIVEGVLVECDPTIKQFLMHLDANKRRFVVKDMDERHILVKKEAMEFVRKELDRMLDDNTFSAAERISRSIT* #PROT g4432.t1.2.5b6be70a g4432 MHLDANKRRFVVKDMDERHILVKKEAMEFVRKELDRMLDDNTFSAAERISRSIT* # PASA_UPDATE: g4436.t1, single gene model update, valid-1, status:[pasa:asmbl_918,status:3], valid-1 NODE_123_length_37279_cov_42.951 . gene 24838 29487 . - . ID=g4436;Name=g4436.t1 NODE_123_length_37279_cov_42.951 . mRNA 24838 29487 . - . ID=g4436.t1;Parent=g4436;Name=g4436.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 29394 29487 . - . ID=g4436.t1.utr5p1;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . exon 29222 29487 . - . ID=g4436.t1.exon1;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . CDS 29222 29393 . - 0 ID=cds.g4436.t1;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . exon 25279 29080 . - . ID=g4436.t1.exon2;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . CDS 25279 29080 . - 2 ID=cds.g4436.t1;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . exon 24838 25064 . - . ID=g4436.t1.exon3;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . CDS 24911 25064 . - 1 ID=cds.g4436.t1;Parent=g4436.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 24838 24910 . - . ID=g4436.t1.utr3p1;Parent=g4436.t1 #PROT g4436.t1 g4436 MPHSHVSSNYGSPASHRSRESTGSEWTSSAAVFVNGRKYLLEGIDPEESLLTFLRTKARLTGTKLGCGEGGCGACTVMISRYDVEAKSVVHRAINACLAPLASVAGMAVTTVEGIGSTATRLHPVQQRIAEGHGSQCGFCTPGIVMSMYTLLRNTPTPSRADLDHAFEGNLCRCTGYRPILQAFTPFVRQSATGCPMGDACCRNNAGSKAVEPAQTPESSSHAHTHVHAEAGGDKCENAGCGEGVTGSPIDPTQEPIFPPELVVSAATHLQPLRFIGPRCTWYRPASLADLLSLKAAHPHARIVVGNTEVGIEMKFKRATYPVLIAGTHVPELQMMRVSQEGTVCIGASVPLADVGVRLQKEVASRPESQTRALRAILEGLRWFAGPQIRNAGCIAGNIATASPISDLNPVLVATNSTVRLASSTGGVRDIPLDGFFVGYRKTAMRPDEVIVSVTIPPTKENEYVETFKQARRKEDDIAIVNACMRVVVTTAQGDAPVVRECALAFGGMGPTVVRAKTTESALVGKKWSTGLVDVATDAMASELSLSDDVPGGMPEYRQALAASFFFKFFSMVSLHIMPSVVDARDLSVCERSHRPPSHGVQVSKSPADAPERAPVGESMAHLSAAKQATGEAIYVDDISPLSNELHAAIVISERAHADILSVDASLAVALPGVHAFVSAADVRGHNDIGPVVHDEEVFATKKVVCVGSVIGIVVADTQARAHEAARLVKVAYIDLPAVLTIEDAIAANSFFEPTRTIVSGDVAAAFTTCDGIVEGEVRMGGQEHFYLETQATLAVPGEDGEMELFVSTQAPTKTQMTVAHVLGVPANRVVCRVKRMGGGFGGKETRNVFLTAAAAVAARRLGRPVRLVLDRDMDMQVTGGRHPFHGRYKVGYMADGRIAALQLEMFSNGGYSYDLSLPVMERALFHLDNAYRIPNVHATGRVCRTNLASNTAFRGFGGPQGMFICETWMSHVADALGLSQNLVRERNLYKDGDRVHYNQDITDCHAERCFVSVRESASFQERAANVAEFNASNRWRKRGLAVIPTKFGISFTAKFMNQAGALVHMYADGSVLVTHGGTEMGQGLHTKMLQVAARELGVPMDAVHISETSTATVPNTSPTAASASSDLNGMAIQVACQTIRERLEPYRAANPSGSVANWAWAAYFDRVSLSATGFYATPDLGYDFATNSGKAFHYYTYGAACSEVEIDVLTGDHAVLRSDIVMDVGHSLNPALDIGQVEGAFVQGQGLFTLEELVYLRSGHLFTRGPGTYKLPGFADIPTDMRVTLLPDAPNPHAIHSSKAVGEPPLFLAASVFFAVREAIKAARLENGEASPFVLDSPATAERIRMACTDRFIARYDAPRPGKAPKNSRWGVVA* # ORIGINAL: g4431.t1 original gene structure, not modified by PASA NODE_123_length_37279_cov_42.951 AUGUSTUS gene 9043 10916 . - . ID=g4431;Name=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS mRNA 9043 10916 . - . ID=g4431.t1;Parent=g4431;Name=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 10903 10916 . - . ID=g4431.t1.exon1;Parent=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 10903 10916 . - 0 ID=cds.g4431.t1;Parent=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 10581 10766 . - . ID=g4431.t1.exon2;Parent=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 10581 10766 . - 1 ID=cds.g4431.t1;Parent=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 9043 10387 . - . ID=g4431.t1.exon3;Parent=g4431.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 9043 10387 . - 1 ID=cds.g4431.t1;Parent=g4431.t1 #PROT g4431.t1 g4431 MCRASPALWAALPLVVALLLAAAASTLWHPSQSPPPTHGAAVRVTVAFLTEAGDPRDDVAVRRLLNEKLDQYRSSCARDADWLAALSAKPHLRPLERTGGGFAAESALLRSACADNAAALARIVGRPFRRILPLPAGDDGPHPAPLGDTGGNGGGGHDDGGQKDGEGASTNSTSFSYDDAFQLMYHLSREWTPALSGHAEAEYGRIVDALVAHAPVSAAVGNVPHDTQGRTRRDRVLLPGCATGRLAFEVAATGLFDVEASDISDVLLGGCAYVAHSLAAQPTWRASAAVHVAPTATVSLDNLEESVRATEDRQGGDGVSGDGADAHVTDGGSWPPLLLRPFAHIRSNSATMAGRYRAVSLDPRGTIALPRLVRARSLAADGGDPGWHGSRDAALVFRKGAFPASHHGDPDGSFAAVVTCFFVDAVPDGSMLVDAIARLLRDGGVWVNYGPLHFHSDDAPPLALDQYLALIEATGFDVVRDEVASGAPYIYDDNSLRREIFRSALWVAVKRRNY* # PASA_UPDATE: g4440.t1, single gene model update, valid-1, status:[pasa:asmbl_920,status:12], valid-1 NODE_123_length_37279_cov_42.951 . gene 35843 37083 . - . ID=g4440;Name=g4440.t1 NODE_123_length_37279_cov_42.951 . mRNA 35843 37083 . - . ID=g4440.t1;Parent=g4440;Name=g4440.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 37080 37083 . - . ID=g4440.t1.utr5p1;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . exon 36925 37083 . - . ID=g4440.t1.exon1;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . CDS 36925 37079 . - 0 ID=cds.g4440.t1;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . exon 36571 36645 . - . ID=g4440.t1.exon2;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . CDS 36571 36645 . - 1 ID=cds.g4440.t1;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . exon 35843 36467 . - . ID=g4440.t1.exon3;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . CDS 36266 36467 . - 1 ID=cds.g4440.t1;Parent=g4440.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 35843 36265 . - . ID=g4440.t1.utr3p1;Parent=g4440.t1 #PROT g4440.t1 g4440 MNSAVSMKLSPPANWLAAANKRPPADVRAGAAKPPTKRSVVNLKPAHSELRTKFLKESGGHLNLFSKGPLVPTLADSYATVCAETMAKDPSLPSGEVISSALAAMLAEIREKEPVVATPQAQLSSFVRLLESDRKKALSARPL* # PASA_UPDATE: g4434.t1, single gene model update, valid-1, status:[pasa:asmbl_924,status:3], valid-1 # PASA_UPDATE: g4434.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_925,status:12], valid-1 NODE_123_length_37279_cov_42.951 . gene 19540 21877 . + . ID=g4434;Name=g4434.t1 NODE_123_length_37279_cov_42.951 . mRNA 19540 21877 . + . ID=g4434.t1;Parent=g4434;Name=g4434.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 19540 19678 . + . ID=g4434.t1.utr5p1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 19783 20077 . + . ID=g4434.t1.utr5p2;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 19540 19678 . + . ID=g4434.t1.exon1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 19783 20113 . + . ID=g4434.t1.exon2;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 20078 20113 . + 0 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 20244 20311 . + . ID=g4434.t1.exon3;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 20244 20311 . + 0 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 20420 20612 . + . ID=g4434.t1.exon4;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 20420 20612 . + 1 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 20888 20999 . + . ID=g4434.t1.exon5;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 20888 20999 . + 0 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 21132 21261 . + . ID=g4434.t1.exon6;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 21132 21261 . + 2 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 21438 21505 . + . ID=g4434.t1.exon7;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 21438 21505 . + 1 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . exon 21627 21877 . + . ID=g4434.t1.exon8;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . CDS 21627 21790 . + 2 ID=cds.g4434.t1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 21791 21877 . + . ID=g4434.t1.utr3p1;Parent=g4434.t1 NODE_123_length_37279_cov_42.951 . mRNA 19540 21877 . + . ID=g4434.t1.1.5b6be70a;Parent=g4434;Name=g4434.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 19540 19611 . + . ID=g4434.t1.1.5b6be70a.utr5p1;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 19540 19678 . + . ID=g4434.t1.1.5b6be70a.exon1;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 19612 19678 . + 0 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 19783 19906 . + . ID=g4434.t1.1.5b6be70a.exon2;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 19783 19906 . + 2 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 20074 20113 . + . ID=g4434.t1.1.5b6be70a.exon3;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 20074 20113 . + 1 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 20244 20311 . + . ID=g4434.t1.1.5b6be70a.exon4;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 20244 20311 . + 0 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 20420 20612 . + . ID=g4434.t1.1.5b6be70a.exon5;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 20420 20612 . + 1 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 20888 20999 . + . ID=g4434.t1.1.5b6be70a.exon6;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 20888 20999 . + 0 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 21132 21261 . + . ID=g4434.t1.1.5b6be70a.exon7;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 21132 21261 . + 2 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 21438 21505 . + . ID=g4434.t1.1.5b6be70a.exon8;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 21438 21505 . + 1 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . exon 21627 21877 . + . ID=g4434.t1.1.5b6be70a.exon9;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . CDS 21627 21790 . + 2 ID=cds.g4434.t1.1.5b6be70a;Parent=g4434.t1.1.5b6be70a NODE_123_length_37279_cov_42.951 . three_prime_UTR 21791 21877 . + . ID=g4434.t1.1.5b6be70a.utr3p1;Parent=g4434.t1.1.5b6be70a #PROT g4434.t1 g4434 MDVQVTLAIDKLYVNFGREILKLIPGRVSTEVDARLSFDTAATIAKAKELIKLYEDAGVDRKRVLIKIASTWEGIQAARALEQENGIHCNLTLLFGFAQAVACAEAGVTLISPFVGRILDWYQAKEKKTFAPTEDPGVESVRKIYNYYKKFGYKTIVMGASFRNIGEIEELAGCDFLTISPTLLEEMQNATRPVAIKLSAEKAQGLDIPRAHMDEKTFRYELNEDPMATEKLSEGIRKFGADTVLLEKTIRDKLSA* #PROT g4434.t1.1.5b6be70a g4434 MATVLDQLKQHTTIVADTGDIASIAKYKPTDATTNPSLLLAAARMAQYAHLVDDAVKYAKENSKDMDVQVTLAIDKLYVNFGREILKLIPGRVSTEVDARLSFDTAATIAKAKELIKLYEDAGVDRKRVLIKIASTWEGIQAARALEQENGIHCNLTLLFGFAQAVACAEAGVTLISPFVGRILDWYQAKEKKTFAPTEDPGVESVRKIYNYYKKFGYKTIVMGASFRNIGEIEELAGCDFLTISPTLLEEMQNATRPVAIKLSAEKAQGLDIPRAHMDEKTFRYELNEDPMATEKLSEGIRKFGADTVLLEKTIRDKLSA* # ORIGINAL: g4429.t1 original gene structure, not modified by PASA NODE_123_length_37279_cov_42.951 AUGUSTUS gene 177 3221 . + . ID=g4429;Name=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS mRNA 177 3221 . + . ID=g4429.t1;Parent=g4429;Name=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 177 430 . + . ID=g4429.t1.exon1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 177 430 . + 0 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 548 706 . + . ID=g4429.t1.exon2;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 548 706 . + 1 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 849 998 . + . ID=g4429.t1.exon3;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 849 998 . + 1 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 1222 1444 . + . ID=g4429.t1.exon4;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 1222 1444 . + 1 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 1708 1848 . + . ID=g4429.t1.exon5;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 1708 1848 . + 0 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 2238 2351 . + . ID=g4429.t1.exon6;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 2238 2351 . + 0 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 2473 2635 . + . ID=g4429.t1.exon7;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 2473 2635 . + 0 ID=cds.g4429.t1;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 2773 3221 . + . ID=g4429.t1.exon8;Parent=g4429.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 2773 3221 . + 2 ID=cds.g4429.t1;Parent=g4429.t1 #PROT g4429.t1 g4429 MEATERWGFTLAREVAQAAEMEGVSVGRCSTASPAESTTMAWEPTESTPPTAVTQWLREFEHFSDDDKRVAIAAFVPKCGLRQLRQLHALVEPLLQRDFVSHLPQELSLFLLGFLDYKSICAAAQVSRSWYRLANDNVLWKKLCERNKLSDSVLRSYKSPEALSREGIRWKDVFFAKHRLKLNWQEGRFVSRSLVGHNDHVITCLQLHDDLVLSGSDDCTLMLWSSITGECLRTYTGHKGGVWCCHFGGDTIVSGSTDKSLKVWDVATGECRYTLMGHTSTVRCLDVQGSLVVSGSRDSTLRVWSISNKQQDGGHCLFVLKGHTAAVRCVAFSGDTIVSGSYDMTLKVWDASKGVLRHTLSGHTAKIYSLQFQGDIIASGSMDASVRVWSASTGVCLRVLVGHRSLVGLMHLRGNILVSGNADETIRVWDITTGVCLNTLMGHHSSVTCVQFDEDKILSGSDDGTVRLWDTKSGQLIRNPLLTVAPDDTNNAQQQPEASAVWRVQYNDAKLVCAVRGPVERYPHNPYMRASDGAKDGVRIILLDFSVNCP* # PASA_UPDATE: g4439.t1, single gene model update, valid-1, status:[pasa:asmbl_926,status:12], valid-1 NODE_123_length_37279_cov_42.951 . gene 34310 35863 . + . ID=g4439;Name=g4439.t1 NODE_123_length_37279_cov_42.951 . mRNA 34310 35863 . + . ID=g4439.t1;Parent=g4439;Name=g4439.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 34310 34350 . + . ID=g4439.t1.utr5p1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . exon 34310 34965 . + . ID=g4439.t1.exon1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . CDS 34351 34965 . + 0 ID=cds.g4439.t1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . exon 35071 35199 . + . ID=g4439.t1.exon2;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . CDS 35071 35199 . + 0 ID=cds.g4439.t1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . exon 35307 35501 . + . ID=g4439.t1.exon3;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . CDS 35307 35501 . + 0 ID=cds.g4439.t1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . exon 35738 35863 . + . ID=g4439.t1.exon4;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . CDS 35738 35848 . + 0 ID=cds.g4439.t1;Parent=g4439.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 35849 35863 . + . ID=g4439.t1.utr3p1;Parent=g4439.t1 #PROT g4439.t1 g4439 MEVDADGGLAPVVAAGGLASAAPASAARAELPWVEKYRPLVLSDVVGNEETVRRLEVIAVEGNMPNLIIAGPPGTGKTTSILCLARTLLGPAVKDAVLELNASDDRGIEVVRNNIKMFAQKKVTLPAGRHKIIILDEADSMTQGAQQALRRTMEIFSSTTRFALACNASDKIIEAIQSRCAILRYTKLSDEQVLKRLLEICAAEKVAAAEDGLEALVFTAQGDMRQAINNLQSTISGFGLVNSDNVFKVCDQPHPLLVRSMIDACAKGRIDDACGGLHELWDLGYSPLDIVSTLFRVVKNADLAEHVRLEYMKEIGHAHLKMTDGIDSLLQLSGLIARLCDVVTSRPAN* # ORIGINAL: g4433.t1 original gene structure, not modified by PASA NODE_123_length_37279_cov_42.951 AUGUSTUS gene 12033 19201 . - . ID=g4433;Name=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS mRNA 12033 19201 . - . ID=g4433.t1;Parent=g4433;Name=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 19149 19201 . - . ID=g4433.t1.exon1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 19149 19201 . - 0 ID=cds.g4433.t1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 18861 19035 . - . ID=g4433.t1.exon2;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 18861 19035 . - 1 ID=cds.g4433.t1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 17018 18751 . - . ID=g4433.t1.exon3;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 17018 18751 . - 0 ID=cds.g4433.t1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 16343 16878 . - . ID=g4433.t1.exon4;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 16343 16878 . - 0 ID=cds.g4433.t1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 12414 16182 . - . ID=g4433.t1.exon5;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 12414 16182 . - 1 ID=cds.g4433.t1;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 12033 12245 . - . ID=g4433.t1.exon6;Parent=g4433.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 12033 12245 . - 0 ID=cds.g4433.t1;Parent=g4433.t1 #PROT g4433.t1 g4433 MAAAASTDRDREIALSTRTNIALHAAIERLSPASACPPDVFAEVLRRSRDRLVEGLRVYKRPSAASEKKLRPEGGKITVAGRERSIGDAERNFVLRLSAAVDLDQWQAFTLLQSYLRDEHRVGTFVFDDVHIVRLADYYADERAAVLRCVSSLLRHAEDESHPYAASLDEAATSLTANAVLIDGVVAQLKDVSNSIRTLLGENGAPATAIATATEGSDAIPAALLIDRDRRLSWRLVEQAELLEILFIAFYSRARCDVTRFVEFAVLFQSACFGETRGLPNVTGGSLGGDAGVTLSPSLLSMARRCAHLCVLVLIECLGLEAVATALHSYPTAHAADIAAVMATAGHAFVGNADAVQLVDGALGRWGERPVHGPVLLAWGALRFVHAARFDQGDAESYRAFASQATTGGSNPLDYLAVDVLGGDAFGPDADSALAYRSVAKGLLTALGVAFQPDSVGLESCVGLAAAVYSGHPLLCAQFWNEEYPSPQLRALLDAAAECFPLKPRPLLSLLSALAADGDCALRSAEYSRNLHTVLVPLTPLVLSCAKRVPVQSDAQDSEQQHALVAMRPIIAYTCSPHRHTCVVIPAGALGQVVQSGSQQAVLWHMRWSAWSLFVPLLDDFIATASLDSSGRLVVSDPSNSLVSVDCIAAILELCAVLLERSATAASIIDAHVVNDVDGGAAALDDSQSRSSPRLHGLLPRMMRVLQRCVLARDLPAPLFTAALRCVGGYAHTRPYDVWSGLVRCGFLPAPGLGFLSPAAPPTSAGWFAGGAGAGALGSQGTVGSSGWGHMRHILHNVECARGSYSATLSFLGILSVLVGCAQMAVPAALIAGDDGLSMRTAFLRHFLSDLGSSISFVLGDVFVGYDSWRYQRVLDRYAIGLRCLSLFDAVLSGWRDPPSSAAAPPTATAGGAGPDADTGSALAHHLATCLASDPVLIAPLLRALGTGTARLEHLWLSRRVREARMVERLVLAASRIVCRLLDGRARLAVPGATGTTILAPTPLDVSLFHWTDTADGQRPLVFVVAEYVFYSRDPGLIVAGAGLVRRLCSASTLWHPRPPSMLGYIGEKDNALRNAYARRLLSKREDVDTKVAILRMIGVAVETQPGLAMRFLDLVAAPAVPSEKQKSGVSDAPPLIGNNSCLRLVVDVLGSHRREMEWRPRLFAAVMGLVRALWERRDMYGQAINAICRSPDFWKNVVLVACPPPVSDAGEDETQTGAAPPSDAVARAQRMVVRGFALHILATELFSSKADPAMLATVQRHLSAPGHVGKWLASCPVHAADPALLARVHSALERVSPVLSLEAFRNAEGLGDGTHLGPLYVYDAERLAHMLLGPTWRSRLREARDASGGLNYSVTLDSEMMVAEEDVTAAFEGPLSTSVAVSRAYGVDSAMDISRAESAAFGGLRPSDPSSIAFGDDVDASVVAGGAAVEAVALVMRANCEWSLSDASLFVVRAWRALFGVLALRRPSVLGVTVSAADATGKAPAASTTSSAPAVSADTGSSDRPGTASALYAALHAAVVGLEDCAGSLVTYASALAARELAAIVAQLCGRWLSCRDPQPTQSQLMSVIVRLVRALRASESGDAAAGNVDRPVHTTLLSLARRKKLAAEVPLGEQLQRQSGTGGDRAVDATDGVTQDEAFLSLVEHLGVCLGRSLAVFERGVGSEGDDNAADGAALCLVLLAETARHLQRVRSAWTSSIARDGVFGRVMNAAVVASGRGTPADGRFLEAALLFLTAACEFYGAADALAAAGLGDAACAVAGQLLTRSTDGTGDSAPAAYAVGPGLCGEERSVWHRAWCHVLALATAALSALGRNQRCLEWCVDLCALAGGRIAAALVVLDPGAETGIVGMSGDADSQGQGHLTLAAVEEARRATALLVALSRYAGAWRFTTPDVFDGLCRSVTCAVQRIAVILERPGMIKRIMRSPTRGERDDELGAQSGVAQALAEGSDARAAAHVERQLFVVMRNALVFVRALTPNPLRPSYGTDWGGVRPLFAPLTDRTPVGPPSIGSLLACLAVCESRLRGHHAQRTISKTRLAEADDEHVRTLLFIAENALVSVLSHATFYLSLPHADESLKVELKRGLQNELSPILEQACKFFHNTGGASAGAQSTPTSSPFGGRTPPLSPASAPGLPRQFARTQEQIVFVLADAYVRKVLR* # ORIGINAL: g4437.t1 original gene structure, not modified by PASA NODE_123_length_37279_cov_42.951 AUGUSTUS gene 29813 31381 . + . ID=g4437;Name=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS mRNA 29813 31381 . + . ID=g4437.t1;Parent=g4437;Name=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 29813 29940 . + . ID=g4437.t1.exon1;Parent=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 29813 29940 . + 0 ID=cds.g4437.t1;Parent=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 30051 30201 . + . ID=g4437.t1.exon2;Parent=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 30051 30201 . + 1 ID=cds.g4437.t1;Parent=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 30548 31381 . + . ID=g4437.t1.exon3;Parent=g4437.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 30548 31381 . + 0 ID=cds.g4437.t1;Parent=g4437.t1 #PROT g4437.t1 g4437 MASALYLGLDLSTQQLKAVATDDESSVKFEFAVLFDRDLPQYGTSSGVIRGADGVSVCTPTALWVDAVDLLLKRMKDSKFPFEAVVAISGAGQARVAFSLVRTSAYERFTGPQIAKIYRTDPKSYAQTSRISLVSSFAASIFTGTICAIDYADGSGMSLLDIRTHRWYQPALDAVAPGLAAKLGDPVPSMSTAGRVSSYLVARYGFNADCQVITFTGDNPASLAGMCLEPGEIAVSLGTSDTVFMTLSDAKPGLLGHIFCSPVDTEKYMALLCFKNGSLARESIRSAAGVTNWEDFERALSSTTPGNDGNVGVYFCDTEIVPIATGIVRIGRDGSFVESFEPAIEIRALIEGQVDPSTFWCAYMSHHNCH* # ORIGINAL: g4435.t1 original gene structure, not modified by PASA NODE_123_length_37279_cov_42.951 AUGUSTUS gene 22789 24843 . + . ID=g4435;Name=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS mRNA 22789 24843 . + . ID=g4435.t1;Parent=g4435;Name=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 22789 22962 . + . ID=g4435.t1.exon1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 22789 22962 . + 0 ID=cds.g4435.t1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 23122 23246 . + . ID=g4435.t1.exon2;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 23122 23246 . + 0 ID=cds.g4435.t1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 23416 23512 . + . ID=g4435.t1.exon3;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 23416 23512 . + 1 ID=cds.g4435.t1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 23850 24113 . + . ID=g4435.t1.exon4;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 23850 24113 . + 0 ID=cds.g4435.t1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 24285 24489 . + . ID=g4435.t1.exon5;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 24285 24489 . + 0 ID=cds.g4435.t1;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS exon 24638 24843 . + . ID=g4435.t1.exon6;Parent=g4435.t1 NODE_123_length_37279_cov_42.951 AUGUSTUS CDS 24638 24843 . + 2 ID=cds.g4435.t1;Parent=g4435.t1 #PROT g4435.t1 g4435 MGHGGAAHAGAAPSHAVGRDSGESTVLCLRMDTMSTTAQLLVCVGGVFVFYLLYAIFQEWIFRLEGFRPYGWYLTLVQFFFYVCFGCVERWASGKKDERRLPLKTYALIALLTVATMGLSNTSLGYLNYPTQVIFKSCKLIPVMIGGMIIQRKRYSLLDFAASLLMSVGLILFTLAEADTSPSFNSTGVTLISLALCADAVIGNVQEQAMRSSGASNAEMVLYSYGIGFLYIFAGEVASGELVPATVFSLAHPWHTYGLAFLFSLTGYLGIIFVLHLVRRFGALLAVTITTFRKAVTMALSFIVFTKPFTMQYVYAGAIVFAGIGINIYEKDKDRIHAVFANYVRPRQTKETLQRV* # PASA_UPDATE: g4438.t1, single gene model update, valid-1, status:[pasa:asmbl_919,status:3], valid-1 NODE_123_length_37279_cov_42.951 . gene 32208 33979 . - . ID=g4438;Name=g4438.t1 NODE_123_length_37279_cov_42.951 . mRNA 32208 33979 . - . ID=g4438.t1;Parent=g4438;Name=g4438.t1 NODE_123_length_37279_cov_42.951 . five_prime_UTR 33918 33979 . - . ID=g4438.t1.utr5p1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . exon 33747 33979 . - . ID=g4438.t1.exon1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . CDS 33747 33917 . - 0 ID=cds.g4438.t1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . exon 32857 33543 . - . ID=g4438.t1.exon2;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . CDS 32857 33543 . - 0 ID=cds.g4438.t1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . exon 32564 32734 . - . ID=g4438.t1.exon3;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . CDS 32564 32734 . - 0 ID=cds.g4438.t1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . exon 32208 32451 . - . ID=g4438.t1.exon4;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . CDS 32266 32451 . - 0 ID=cds.g4438.t1;Parent=g4438.t1 NODE_123_length_37279_cov_42.951 . three_prime_UTR 32208 32265 . - . ID=g4438.t1.utr3p1;Parent=g4438.t1 #PROT g4438.t1 g4438 MATSSTTQKLVRQFLQQYYSVLSSNPDTQLHLFYHDNSSLSRANPSELAAETAHGLEAIRAKIQSLGYKDCRINVTTIDYQTSVGDGIVVTVNGELAISSENPRSFMQTFFLARQNPSGYYVHNDMLRFLEDPAVDVADESEAVAEVESAPEAVQHTPEAAPAVAAPVEPEVVQAAPSPRGPAQAPQTHAPAAEPQHQQPAQRAAPSPRVQAAQPAAAPVAAAAHHEPAVLPPPAAVTASELAPVSSQPPVRKSWAGVASTNKEVPQPAPVAERKVPTLQKPVQQQRLAKPAEDPKAARPDAPSARPSVYVKNVPADATEDALHRVFAEAVGGVRSCKVLPAKNPGMPLSAFVDFESAEAVQKAIKHKSVLFNGVTLIVEERREKSSSAPQKRAEGSRRPTSKQ* # PASA_UPDATE: g11112.t1, single gene model update, valid-1, status:[pasa:asmbl_5193,status:3], valid-1 NODE_2891_length_4829_cov_19.2857 . gene 3415 4366 . - . ID=g11112;Name=g11112.t1 NODE_2891_length_4829_cov_19.2857 . mRNA 3415 4366 . - . ID=g11112.t1;Parent=g11112;Name=g11112.t1 NODE_2891_length_4829_cov_19.2857 . five_prime_UTR 4292 4366 . - . ID=g11112.t1.utr5p1;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . exon 4216 4366 . - . ID=g11112.t1.exon1;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . CDS 4216 4291 . - 0 ID=cds.g11112.t1;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . exon 3839 4138 . - . ID=g11112.t1.exon2;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . CDS 3839 4138 . - 2 ID=cds.g11112.t1;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . exon 3415 3743 . - . ID=g11112.t1.exon3;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . CDS 3688 3743 . - 2 ID=cds.g11112.t1;Parent=g11112.t1 NODE_2891_length_4829_cov_19.2857 . three_prime_UTR 3415 3687 . - . ID=g11112.t1.utr3p1;Parent=g11112.t1 #PROT g11112.t1 g11112 MASVSIGNVKHMKEMSRVKVAANNAGEVSRVAEAVSKFSAIKRPTKWLKIDTVDLIGSCSDVSFQIGDKKTPKKHSRKRHGPPRRTQSAQSAEASRVQLVVGNPAGVAAREAPVGGLTAPAPEQNGDRVPSSLYEGGVSPSVF* # ORIGINAL: g11111.t1 original gene structure, not modified by PASA NODE_2891_length_4829_cov_19.2857 AUGUSTUS gene 200 2386 . - . ID=g11111;Name=g11111.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS mRNA 200 2386 . - . ID=g11111.t1;Parent=g11111;Name=g11111.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS exon 200 2386 . - . ID=g11111.t1.exon1;Parent=g11111.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS CDS 200 2386 . - 0 ID=cds.g11111.t1;Parent=g11111.t1 #PROT g11111.t1 g11111 MSFSSLPVETVVCHIVPLLSDKDRVSLAFVNSKLRGWLKPTCFYTLKRAVAEKYSEDVNFRQGVWDLIPKERLILNLTYCKAVTDVSALGGVHSLDLSGCKGVTDVSPLGSVHSLVLAYCKEVRDVSALDRVHSLNLSGCRGVTNVSALDGVHSLVLAYCKGVRDVSALGGVHSLDLAGCKGVTDVSALGGVHSLGLSGCEGVRDVSALDRVHSLNLSGCTGVRNVSALGGVHSLNLSGCEGVTDVSALGGVHSLNLRGCEGVTDVSALGGVHSLVLAYCRGVRDVSALDRVHSLNLSECRGVTNVSALGGVHSLDISHTKVTEVSALGGVHSLNLARCKEVTDVSALGGVHSLDLSWCYRVTDVTALSGVHSLNIACCGEVTDVSALPGVHSLDISCTNLTDVSALGGVHSLNLAGCSRVRDVSALRGVHTLNISGTSVTDVSALGGVHSFDLSRCTRVTDVSALGGVHSLDLSYCQGVTDVSALGGVHSLVLLDCQGVTDVSALGGVHSLDLSYCQGVTDVSALGDVHSLDLSECNGVTDVSALGDVHSLDLSDCQRVTDVSALGDVHSLNINRTNVTDVSALGRVHSLKLSDCTKVMDVSALGGVHSLNLFRCTRVTDVSALGRVHSLRLLKCTGVTDVSALGGVHSLDISCTNVIDVSALGGVHSLNLAGCSRVTDVSALGGVHSLNLSHCERVTDLSALGDVHLLEFYNNANVFAYLEEINMD* # ORIGINAL: g11110.t1 original gene structure, not modified by PASA NODE_2891_length_4829_cov_19.2857 AUGUSTUS gene 2 100 . + . ID=g11110;Name=g11110.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS mRNA 2 100 . + . ID=g11110.t1;Parent=g11110;Name=g11110.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS exon 2 100 . + . ID=g11110.t1.exon1;Parent=g11110.t1 NODE_2891_length_4829_cov_19.2857 AUGUSTUS CDS 2 100 . + 0 ID=cds.g11110.t1;Parent=g11110.t1 #PROT g11110.t1 g11110 SARYQTKNVLALVGASGSGKTKSFYTLADGVA* # ORIGINAL: g1537.t1 original gene structure, not modified by PASA NODE_2172_length_7426_cov_43.6926 AUGUSTUS gene 212 5963 . - . ID=g1537;Name=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS mRNA 212 5963 . - . ID=g1537.t1;Parent=g1537;Name=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 5858 5963 . - . ID=g1537.t1.exon1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 5858 5963 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 5596 5616 . - . ID=g1537.t1.exon2;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 5596 5616 . - 2 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 5259 5454 . - . ID=g1537.t1.exon3;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 5259 5454 . - 2 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 4845 4860 . - . ID=g1537.t1.exon4;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 4845 4860 . - 1 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 4396 4563 . - . ID=g1537.t1.exon5;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 4396 4563 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 3995 4141 . - . ID=g1537.t1.exon6;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 3995 4141 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 2801 3731 . - . ID=g1537.t1.exon7;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 2801 3731 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 2470 2654 . - . ID=g1537.t1.exon8;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 2470 2654 . - 2 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 2241 2285 . - . ID=g1537.t1.exon9;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 2241 2285 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 1751 1926 . - . ID=g1537.t1.exon10;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 1751 1926 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 1278 1565 . - . ID=g1537.t1.exon11;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 1278 1565 . - 1 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 1084 1120 . - . ID=g1537.t1.exon12;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 1084 1120 . - 1 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 706 936 . - . ID=g1537.t1.exon13;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 706 936 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 489 554 . - . ID=g1537.t1.exon14;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 489 554 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS exon 212 321 . - . ID=g1537.t1.exon15;Parent=g1537.t1 NODE_2172_length_7426_cov_43.6926 AUGUSTUS CDS 212 321 . - 0 ID=cds.g1537.t1;Parent=g1537.t1 #PROT g1537.t1 g1537 MVILAAGVCLYAGSASAANATKLTIGCILPLSGPNEFLAGRPSRAGFIAALKKYANSIPGVELDIARLDSDDGGIVLDDASVPTNGLFNALDLILKRDVVGIIGAWNSAVSIQVNSVAARLGTVQLSAGSSSPALTEKSNYCTFTRVIPSDESQYRVLAVLIRLLGWRKVGIIYTNDAFGEGGAYAFKDAAPKNGIDVLAFVTMPYSSRELGRDAIVPLRRVLENNVRIIIISMATDDARLVLEAAESLGIAGNPDYVFVGADGWVLDDIMVDWPGHENTLRGVLGTSAAVASGTPAYSAFVDALGTVGESTVEPINQFAAFAFDGTRMFIRALNSTVANLRDLGIPVECLRPSFRDANPGNCTLTTATRDSLFAAATCNATTTPGCVPSRGVSAFMQYKWHRENATFGVFSRSPSAILLNELYRTNFVGATGKVALDVNGDRASSFSIVNGRPVLINGSYVVRFKRIGLISVDSEVGASLSGNNNASSPSSASPTIVLDVQLIYAGGSNAVPNANQPADSVASATVQASSGGSSLLTVVLPLAIVLPTIAVIAGALLWRERRLKEALEVKATSWLILEDEVELFETIGEGAFGFVSRGRYRGCEVAVKFIRLDRDTGGDNATATIRAAAQLSRSARPSRSSRLGRLLGRRAPPENPVEDEEKCDTDVTVADIIREDADGTSTTHGTSSILAGDPSPTATAANSGANKNKPQRSVRLRPSRVTTATGDGADNKAISVRMMLDPHETEKAATTFLKEIETMCALRHPNIVMFMGACLDTTDPFMVLEYLSNGTLEQLYLDASNPFPWPQRRSAALDTARGMLYLHSGSVPLLHCDLKSMNVLLDDHMRCKIADFGLTTIMKRNVKLADDANGWVGSAHWLAPEVARTGKNTCESDVYSYGGFETEEEK # ORIGINAL: g5467.t1 original gene structure, not modified by PASA NODE_724_length_18581_cov_42.2955 AUGUSTUS gene 5359 6846 . + . ID=g5467;Name=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS mRNA 5359 6846 . + . ID=g5467.t1;Parent=g5467;Name=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 5359 5579 . + . ID=g5467.t1.exon1;Parent=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 5359 5579 . + 0 ID=cds.g5467.t1;Parent=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 5757 6528 . + . ID=g5467.t1.exon2;Parent=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 5757 6528 . + 1 ID=cds.g5467.t1;Parent=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 6793 6846 . + . ID=g5467.t1.exon3;Parent=g5467.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 6793 6846 . + 0 ID=cds.g5467.t1;Parent=g5467.t1 #PROT g5467.t1 g5467 MPSPFLACLPHDVYAELTLADLVSAEVSLAHPLADVKKQTPASPSDSNAHEHAIMAHGAITCPVAYVESASGVRVSGILERIDGPASPSTLAGATAWLTDGAISLPVHFDAARFALAPCVPCVGDFVTVVGHVTTPGGLNRGQGPCIGISAHGVSVHAGPSCAEASAAAQSSACGEVERRRAFKKRAAYLSQSQLPLVSPARPREDDSDARAHAKKPRFESRTPLGRQVAENGNRANMAFAPSKAMAGVAVPHNGGGGAGDAFVRALLHNVQEERVDHLSQVSQEVVSLGWVAVRVGEAVRSAGIAGIVLDGVVSAVPEAGAAAVREAVKQLLAGGLAYESDGKYFGV* # PASA_UPDATE: g5465.t1, single gene model update, valid-1, status:[pasa:asmbl_9059,status:12],[pasa:asmbl_9060,status:12], valid-1 NODE_724_length_18581_cov_42.2955 . gene 818 2273 . + . ID=g5465;Name=g5465.t1 NODE_724_length_18581_cov_42.2955 . mRNA 818 2273 . + . ID=g5465.t1;Parent=g5465;Name=g5465.t1 NODE_724_length_18581_cov_42.2955 . five_prime_UTR 818 903 . + . ID=g5465.t1.utr5p1;Parent=g5465.t1 NODE_724_length_18581_cov_42.2955 . exon 818 973 . + . ID=g5465.t1.exon1;Parent=g5465.t1 NODE_724_length_18581_cov_42.2955 . CDS 904 973 . + 0 ID=cds.g5465.t1;Parent=g5465.t1 NODE_724_length_18581_cov_42.2955 . exon 1321 2273 . + . ID=g5465.t1.exon2;Parent=g5465.t1 NODE_724_length_18581_cov_42.2955 . CDS 1321 2102 . + 2 ID=cds.g5465.t1;Parent=g5465.t1 NODE_724_length_18581_cov_42.2955 . three_prime_UTR 2103 2273 . + . ID=g5465.t1.utr3p1;Parent=g5465.t1 #PROT g5465.t1 g5465 MASIDDMFADLDSIMGSMMESAAVSPGVGKPGDRPRSLGDALANIMKSAELAGQERRQKEMEEQAGKDRVERVRIARAAAERQLRELELDAKRLEVQNNIDAAKARVDEATSDAAGAVARVVTALRSPAVFDASAPDILALARDAVSKCGPILNLVAAHLEQTQREDLAAAMLAQAAQASSEETPRRGSFPEPRKRPSLVDDIFYPPLPPNPHLPLQLSVDLVYERLRGFVACAKEVAEDDVAATRHKAASAAYQLLVSLRDVRDLTATAVEDRMIKQAGQVK* # ORIGINAL: g5466.t1 original gene structure, not modified by PASA NODE_724_length_18581_cov_42.2955 AUGUSTUS gene 2490 4819 . - . ID=g5466;Name=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS mRNA 2490 4819 . - . ID=g5466.t1;Parent=g5466;Name=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 4801 4819 . - . ID=g5466.t1.exon1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 4801 4819 . - 0 ID=cds.g5466.t1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 4601 4631 . - . ID=g5466.t1.exon2;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 4601 4631 . - 2 ID=cds.g5466.t1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 3560 4141 . - . ID=g5466.t1.exon3;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 3560 4141 . - 1 ID=cds.g5466.t1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 3210 3357 . - . ID=g5466.t1.exon4;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 3210 3357 . - 1 ID=cds.g5466.t1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 2793 3017 . - . ID=g5466.t1.exon5;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 2793 3017 . - 0 ID=cds.g5466.t1;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS exon 2490 2651 . - . ID=g5466.t1.exon6;Parent=g5466.t1 NODE_724_length_18581_cov_42.2955 AUGUSTUS CDS 2490 2651 . - 0 ID=cds.g5466.t1;Parent=g5466.t1 #PROT g5466.t1 g5466 MASRLLVNVRLLERLQGGARDAHQGVDYKSLVAKDISLIGKEMRAALASTVPAMAAASRYYFDQKGKNFRPLTILLVAGACNAGLLSSDHAAGNACAVPLGTEAAAQDDGGNHVLDSQRHVAMIAEMIHTASLVHDDIIDDASMRRGKASVNAAFGDTASVFAGDFILARASIQLARIGNVEVIRLISTIISDLVGGELLQLGSDGTHAERFATYIEKTFMKTASLLAYSCKAVAVLGNQGQAAEDAAFGYGRNLGIAFQLVDDLLDFVSTSELMGKPTAADLQLGLATAPVLFASEQFPQLNALIARKFRNKGDVEKARDSLLSLFLHGMRRFRAWALVEQSDGLRKTRDLATSYCDRAREHLLAFAPSPARTALSQIASMVLSRQT* # PASA_UPDATE: g5468.t1, single gene model update, valid-1, status:[pasa:asmbl_9061,status:12],[pasa:asmbl_9062,status:12],[pasa:asmbl_9063,status:12],[pasa:asmbl_9065,status:12], valid-1 NODE_724_length_18581_cov_42.2955 . gene 7057 15732 . - . ID=g5468;Name=g5468.t1 NODE_724_length_18581_cov_42.2955 . mRNA 7057 15732 . - . ID=g5468.t1;Parent=g5468;Name=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 15448 15732 . - . ID=g5468.t1.exon1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 15448 15732 . - 0 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 15080 15280 . - . ID=g5468.t1.exon2;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 15080 15280 . - 0 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 12969 14894 . - . ID=g5468.t1.exon3;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 12969 14894 . - 0 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 11491 12871 . - . ID=g5468.t1.exon4;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 11491 12871 . - 0 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 10704 11294 . - . ID=g5468.t1.exon5;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 10704 11294 . - 2 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 10451 10554 . - . ID=g5468.t1.exon6;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 10451 10554 . - 2 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 8766 10002 . - . ID=g5468.t1.exon7;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 8766 10002 . - 0 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 8368 8445 . - . ID=g5468.t1.exon8;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 8368 8445 . - 2 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 7904 8012 . - . ID=g5468.t1.exon9;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 7904 8012 . - 2 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 7535 7617 . - . ID=g5468.t1.exon10;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 7535 7617 . - 1 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . exon 7057 7417 . - . ID=g5468.t1.exon11;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . CDS 7308 7417 . - 2 ID=cds.g5468.t1;Parent=g5468.t1 NODE_724_length_18581_cov_42.2955 . three_prime_UTR 7057 7307 . - . ID=g5468.t1.utr3p1;Parent=g5468.t1 #PROT g5468.t1 g5468 MASDSSGALPPTGAAPPIAPKMLAKCHFAIDRTSNPCPAFSPNVSALVTSTVAAEFGNVAVTLDDVDRRLRVILLGPECDVLAARMRIYDLVLSKVTMTFFLPEECADSAVLARVSEGIAGTSIDGVIKAVRLLGQASITITAPVEKLDSFRGEIITTTSATAGWSSEAVDVPREHLPLFVSDGDFIHGVEQTFRVSVYCPYPPSSRSSVTVLGRQPDAVSGAAGRLRERISSLSQHSTTLSVVVPHGQLSGLVAERERRIHAIASATATFLALPPAASNADLVTISGRMDACLRATSLLLEAAKGALCRVEVPSEHVITPLDAAAVAARTGACVLQPIVALSGGTLHVVDPSRPVVVVGDSACVEPALNLLDRRNASAVPPVPLPLPLPLSLSPAQLPLGIVGGLPFGYHNSSVSLANSTSPIAAYSPGTTALRLSIPGSFQHSPVPPSPVQLAPADSPRRQGGVRSVSVDADVSELRGHAKPFVPRGLSLSHPHTQGAQALTPPSHLGLPQSPDVHVTSGVSTPYGRAVSLPPSSPSHDGGENGSAEGSSLVSLRDRSNSYDSPRDSFASSLGSSMRDLGSSLDDSSHLVTIEEGPDGKVEMHFRVDRHRLEYLLRDYADVGAGCAAIFGTIMSSTGTQIRLPPKLKVGARSKKNPTVMIVGDRDTAAAARIEVLRLLDTEAAKVTAKVEIAADSHSDVIGKGGCNVRAIMQQTHTHIHFPDSHRARNPMRGTQVTISGHPARVDEGRLLLRQCLPLCVSYVVPITAGLRVDDRSPAVRAIGATFSVSIAVKRWVGPHHAQQVFVRSMEGRAEAVKDACARMMELFGTSIGLVSVTVSIPPDQQPYVRGEGDINAKQIARRTLTSIHFPSTSALAVSIPTSSPQMMPQLASLEPAIVSPNAESPQAAVVVGAQQQLLVLMAQQQQYRPTSEVTIVGSFPASMSARKELLDSLPFVLLFEIADDVVLDPVSVRMIGTEYAVHITIKSSRQHSQTVSIRSTERNAAAAFVARDQIVSLLESSGTFSAAPQQSFLSTPRASTGEHERPGSEGRNGQSQYTSPHPLSGSCALRNQQHQPNPAQPITPSQLDGRTHSPTANQQHARSAAIAIAQQQQQQQQQQQQQQQHSYVMQRPAHVEDEEVDTLSRSFGRGSGVMPKQDGQYVSPSSHGPQTRVAMVQEGGDTDNEPFSMFSRANSVADALGQSVGHIASLRELDRTPPAQTQGQTQQGQIMVPVQKSKSQSPNGSSESVVSGSTGSGSVGKQQGEYSLWRSMDDDRSYPGDMFSQSWPLVRGSGGAQAPAGHDPSGRSSGLGSRPSSRSSQADQSSLHRPSSLSSSANGALLGSSGHGAGGRTLSFDSGTDVGDVDGSVHPAINASGSHVAVQEEGKKQEASASVDDVGEGLELEYLNEMADAIASAGAGDTSGDIVSAVSLTASALNPHDSGTAEDDEGYGQRQRLAEMVMRKTVNFDKVHEPTSTWSGLGFSKSTPEGTLRDLLREHAHSSPSIGSETSFSRRDSVQSHGADSIGPYSTDDDSVLAVAGALHAHQQPNPTEGSAAHTDRKESAQCDDPASAAAVDGAPSGTPDAASLAHSHTLADCGAPLSRPAVDTTAQTQTQTQIQAQTQIHVQAQTQTQIPESIACARDAARASPQVQPPSHPSASSAQHAPHVTAHVSPRPTGDSRQQPAQGQQQQQQQHYPQYTPPAPDYAVARSPRMSAGVLHTAMVGSPHVLAPAANAAHGHSTPAHMYAPLYALPGMHGQPLGAQHAQALMGQYGIAGLAQPPHVPPHVPPHASPLYHGQSYQLSYQHAQMQQQQLQQQQHQQFQLRLQQQQQQQQQQQQQQQQQQQQQQRLPTSSPATVLHNAFVTPQPSPTKAVAPGMQASPSSANAMAGNAAGSTPLATTPDAQNRRPSAGSATSSVANTPAVGSATPCKDLDSLLANAGLSQYSDLFAAQEVDLATFVELSEGDLKDLGVVALGARRRMLAAAARLSRDGNGAESPSAVFSPVTSPLPPSTSQMRDFPPVSPQHFQQNH* # PASA_UPDATE: g5469.t1, single gene model update, valid-1, status:[pasa:asmbl_9064,status:12],[pasa:asmbl_9066,status:12], valid-1 NODE_724_length_18581_cov_42.2955 . gene 16681 18128 . - . ID=g5469;Name=g5469.t1 NODE_724_length_18581_cov_42.2955 . mRNA 16681 18128 . - . ID=g5469.t1;Parent=g5469;Name=g5469.t1 NODE_724_length_18581_cov_42.2955 . five_prime_UTR 18061 18128 . - . ID=g5469.t1.utr5p1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . exon 18028 18128 . - . ID=g5469.t1.exon1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . CDS 18028 18060 . - 0 ID=cds.g5469.t1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . exon 17731 17804 . - . ID=g5469.t1.exon2;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . CDS 17731 17804 . - 0 ID=cds.g5469.t1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . exon 17287 17469 . - . ID=g5469.t1.exon3;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . CDS 17287 17469 . - 1 ID=cds.g5469.t1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . exon 16681 17117 . - . ID=g5469.t1.exon4;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . CDS 16745 17117 . - 1 ID=cds.g5469.t1;Parent=g5469.t1 NODE_724_length_18581_cov_42.2955 . three_prime_UTR 16681 16744 . - . ID=g5469.t1.utr3p1;Parent=g5469.t1 #PROT g5469.t1 g5469 MDQINVEDSLQGGITPSMRMAAKKHIYSGPGQRAPMDASQKKCQKCLQVGHLTYECKGDRPYVSRPSRTQQLKERLKHQKNGTPVAPKLMTELPPGRERDQAEAAAKAAAEQAAKEAKEKAKRRRRRSSSSSSSSSGSSSSSSSDDSGSESDSSSSSSSSSSSSSSSSSSSSSTSSSSSSSGSSSSRPPVAPRSSERPPAKRSKSPRSRSRSPSPKRRRQ* # ORIGINAL: g3494.t1 original gene structure, not modified by PASA NODE_992_length_14971_cov_47.7378 AUGUSTUS gene 7251 14578 . + . ID=g3494;Name=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS mRNA 7251 14578 . + . ID=g3494.t1;Parent=g3494;Name=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 7251 8153 . + . ID=g3494.t1.exon1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 7251 8153 . + 0 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 8291 8571 . + . ID=g3494.t1.exon2;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 8291 8571 . + 0 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 8748 8906 . + . ID=g3494.t1.exon3;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 8748 8906 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 9042 9123 . + . ID=g3494.t1.exon4;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 9042 9123 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 9267 9325 . + . ID=g3494.t1.exon5;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 9267 9325 . + 0 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 9712 9861 . + . ID=g3494.t1.exon6;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 9712 9861 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 9971 10059 . + . ID=g3494.t1.exon7;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 9971 10059 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 10183 11100 . + . ID=g3494.t1.exon8;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 10183 11100 . + 2 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 11301 11482 . + . ID=g3494.t1.exon9;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 11301 11482 . + 2 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 11614 12257 . + . ID=g3494.t1.exon10;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 11614 12257 . + 0 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 12414 12492 . + . ID=g3494.t1.exon11;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 12414 12492 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 12695 12777 . + . ID=g3494.t1.exon12;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 12695 12777 . + 0 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 13040 13090 . + . ID=g3494.t1.exon13;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 13040 13090 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 13255 13445 . + . ID=g3494.t1.exon14;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 13255 13445 . + 1 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 13578 13700 . + . ID=g3494.t1.exon15;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 13578 13700 . + 2 ID=cds.g3494.t1;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 14460 14578 . + . ID=g3494.t1.exon16;Parent=g3494.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 14460 14578 . + 2 ID=cds.g3494.t1;Parent=g3494.t1 #PROT g3494.t1 g3494 MCSKHKLRGTSASRKPDNICMLWRRGLGGLLCRHRGRNALPLNLLVIALSVCTFATIVSDAELIGGGGGFALRFNGNDQFFDFDDIPEMRDNFTFEMLVYPCSAADQQALLTKVVPEGIAVTIAYFNGGYGLGWVSGGDTRIPPRAGSHHLAWTGERVKLEGVSKMRVIGYINGDKMAELSPSDFSLQSPLAEVFGVTLSLKWYVGMRSRLTRKGSVNERPFCGVIDELRMWSYARTEAEIRSLIGIVIPDANLTGPAYNELRGYWKFDDGEGPLARNSKSTNGRSHGLLGGGSRDSMPLWVQSPFSLVGSHVTTVATENGSIAITLPAFDVQGNMSIPCAVLIRSVPLNGSVFLADESGTKASSATALSANSWLPISSRNVVIYKPISAEYGARYASFEYTVCKTALIQASCDVRNYSVVVDVKQNHRPISGRANALTFNGESDYCTFAEPDITLPDDFTLEIWVNPTSKRTGQALIGKHSSIGKNLFLFGLYEYHLNYNDKTYTGGINDVWAYPHHLAIVHRGGMLSSNVTVYRNGVLLWTYVFPTTFQHGPGLAWTLGQDYDTSSDGPITSDYFYGQLDEFRIWTSARAPGEIAADMRRALAGNESGLYLYYRMDEASNFDTTSINSIGSGNYRIKLHSTTLKGSVFDVPGSEVGYSLRQGTNITVSLERFDQDGDSTSTTIISLPSVGVVFVLYPNNGTIQRVTAVPFTMTSSNVVYVAPSGIGFHKERLLYEVDDGLLHSDSISAVFSVRIPAPIIVRITAGSITGSSQFGDGSTITIEFSVATNMPAVSTMAAVDALLSFTPNRPGAIFTGEWISPSRLLLRVLSAGNATAPLVGNFTVRVKGSLMNAEETSVEARYEPQATIPVLEGSWNNSPASPSNQHSLELILGTVMPCATLLAIVGLVVFRRHRHNDVRTSMQRFLFKRTEIELLEKLAEGGFGVVHKGRFRGTVVAIKMIKAALAPNSDATTVHTEGTLHNVNEPPGARQALRLARASITYNASNRGHNGHTTFGTPKQQRARRQTIMGSVRSLLSETVEPLNTHRMPGLMGPPALHLTAGASHGQPQLFTRALARSHAISAASVASPRNRRMSTTHVTAGLVTGLFVDDLDEGHHEWEEGSCDFDANEADTKNRQRKWTQQMRMFMSEIDIMGSLRHPNIVLFMGACLEEVSRPMIIQEYLVGGSLRDGLTNKRDEWPLTIRLCMAIDACAGMEYLHLNSPQILHRDLKSANILIDGKLSAKVADFGLSTVKYGDTGSSSEESGKIVGSIGYIPPECFGGEVFTAAGDVYAMGMILWECVTAEIPYEKELRERSILSPFHILVAVTLQDSGHMAPIWYVYGTMWLPYDTMTGGAVWNRYGTARYYTG* # ORIGINAL: g3493.t1 original gene structure, not modified by PASA NODE_992_length_14971_cov_47.7378 AUGUSTUS gene 190 3214 . + . ID=g3493;Name=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS mRNA 190 3214 . + . ID=g3493.t1;Parent=g3493;Name=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 190 281 . + . ID=g3493.t1.exon1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 190 281 . + 1 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 403 502 . + . ID=g3493.t1.exon2;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 403 502 . + 2 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 599 684 . + . ID=g3493.t1.exon3;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 599 684 . + 1 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 862 977 . + . ID=g3493.t1.exon4;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 862 977 . + 2 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 1073 1168 . + . ID=g3493.t1.exon5;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 1073 1168 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 1552 1662 . + . ID=g3493.t1.exon6;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 1552 1662 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 2016 2160 . + . ID=g3493.t1.exon7;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 2016 2160 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 2246 2328 . + . ID=g3493.t1.exon8;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 2246 2328 . + 2 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 2433 2585 . + . ID=g3493.t1.exon9;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 2433 2585 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 2691 2888 . + . ID=g3493.t1.exon10;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 2691 2888 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS exon 3035 3214 . + . ID=g3493.t1.exon11;Parent=g3493.t1 NODE_992_length_14971_cov_47.7378 AUGUSTUS CDS 3035 3214 . + 0 ID=cds.g3493.t1;Parent=g3493.t1 #PROT g3493.t1 g3493 SLQGKLRIGLAEQSVLAALARAVVLTPPSGAFPLLVLDARSSMDDSAFAAALDAATLIIKTTYCELPNYDVIVPVLLNDGLEGLPKKCTLTPGVPLKPMLAHPTRGIGEVLKRFDGLHFTCEYKYDGERAQVHLTENGGVMIYSRNSENNTTKYPDIVARIPKVKGQSVRSCILDCESVAWDRERKMIQPFQVLSTRKRKSLVKQPFLARRSLLRENFSEIEGEFMFAKGSDAADTEKIEEFLDESIKANCEGLMVKTLEVDATYEIAKRSHNWLKVKKDYLEGVGDTLDLVVIGGYRGKGKRTGTYGGFLLASYDPDNEEYQSICKIGTGFSDEDLATHTLFLNKHVIPQARPYYRYGDGVAADVWFDAVQVWEVKAADLSLSPVHKAAVGQIDPERGISLRFPRFIRIRDDKTPEDATASEQVVSMYNAQQVIQANKAGGAGEAEDDDFY* # PASA_UPDATE: g950.t1, single gene model update, valid-1, status:[pasa:asmbl_6103,status:12], valid-1 NODE_3471_length_3396_cov_28.9572 . gene 132 2187 . - . ID=g950;Name=g950.t1 NODE_3471_length_3396_cov_28.9572 . mRNA 132 2187 . - . ID=g950.t1;Parent=g950;Name=g950.t1 NODE_3471_length_3396_cov_28.9572 . five_prime_UTR 1731 2187 . - . ID=g950.t1.utr5p1;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . exon 1357 2187 . - . ID=g950.t1.exon1;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . CDS 1357 1730 . - 0 ID=cds.g950.t1;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . exon 807 1002 . - . ID=g950.t1.exon2;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . CDS 807 1002 . - 1 ID=cds.g950.t1;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . exon 330 578 . - . ID=g950.t1.exon3;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . CDS 330 578 . - 0 ID=cds.g950.t1;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . exon 132 203 . - . ID=g950.t1.exon4;Parent=g950.t1 NODE_3471_length_3396_cov_28.9572 . CDS 132 203 . - 0 ID=cds.g950.t1;Parent=g950.t1;3_prime_partial=true #PROT g950.t1 g950 MTMRCESADIARGLNDCLAPGALPSIDAFLAETGSDGQLENEAWVCSFRMRGLRVFQKKFTRPYVCWREHKRVVVPATTVLALLRDYSPARLRWDPSLLEVTVVETRDDGTRVVRYLYSSPSVHRSREFLVLEREVTMDKTVFVLMQSLREHKDVPTSARFVRATMIISGFAVTEDPADPNACFYTHLNQVDIKSLHLNSFDMQLEETLTSFRPRLFGIERAIAEQAKGQPSSPSGPVFSGSGRRMSEERKQSSIALARKVTKIRRMVGTTTENISEESAPQSNVPEAAEDSYVPFE # PASA_UPDATE: g9856.t1, single gene model update, valid-1, status:[pasa:asmbl_2483,status:12], valid-1 NODE_1737_length_9468_cov_48.6956 . gene 201 8483 . - . ID=g9856;Name=g9856.t1 NODE_1737_length_9468_cov_48.6956 . mRNA 201 8483 . - . ID=g9856.t1;Parent=g9856;Name=g9856.t1 NODE_1737_length_9468_cov_48.6956 . five_prime_UTR 8310 8483 . - . ID=g9856.t1.utr5p1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 8305 8483 . - . ID=g9856.t1.exon1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 8305 8309 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 7906 8002 . - . ID=g9856.t1.exon2;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 7906 8002 . - 1 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 7503 7687 . - . ID=g9856.t1.exon3;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 7503 7687 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 7085 7109 . - . ID=g9856.t1.exon4;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 7085 7109 . - 1 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 6716 6859 . - . ID=g9856.t1.exon5;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 6716 6859 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 6136 6199 . - . ID=g9856.t1.exon6;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 6136 6199 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 5843 5856 . - . ID=g9856.t1.exon7;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 5843 5856 . - 2 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 5478 5562 . - . ID=g9856.t1.exon8;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 5478 5562 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 4904 5170 . - . ID=g9856.t1.exon9;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 4904 5170 . - 2 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 4561 4679 . - . ID=g9856.t1.exon10;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 4561 4679 . - 2 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 4138 4226 . - . ID=g9856.t1.exon11;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 4138 4226 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 3806 3940 . - . ID=g9856.t1.exon12;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 3806 3940 . - 1 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 3386 3479 . - . ID=g9856.t1.exon13;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 3386 3479 . - 1 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 2977 3141 . - . ID=g9856.t1.exon14;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 2977 3141 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 2389 2592 . - . ID=g9856.t1.exon15;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 2389 2592 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 1843 2175 . - . ID=g9856.t1.exon16;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 1843 2175 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 1353 1716 . - . ID=g9856.t1.exon17;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 1353 1716 . - 0 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 979 1200 . - . ID=g9856.t1.exon18;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 979 1200 . - 2 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 464 606 . - . ID=g9856.t1.exon19;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 464 606 . - 2 ID=cds.g9856.t1;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . exon 201 270 . - . ID=g9856.t1.exon20;Parent=g9856.t1 NODE_1737_length_9468_cov_48.6956 . CDS 201 270 . - 0 ID=cds.g9856.t1;Parent=g9856.t1;3_prime_partial=true #PROT g9856.t1 g9856 MGTIGAEDMTQLGDYDEGSLLNNIKIRFEKDVIYTYTGSILVAINPFKPVPTYGPDQFRRYKGQRIGQLPPHIFAIADSTFTSLFRDKINQCVVISGESGAGKTESTKYILQYLANLNSKHSLVEEQILQANPIMEAFGNAKTERNNNSSRFGKFIKIQFNDQGGIDGASIAEYLLEKSRVVQQSKLERNYHVFYNLLAGATAQEKGALMLQEASKYRFLNYSEGKIQERDDRKDYEELVDAMRLLGFNAERIADIFRCTAIVLHIGNFDFEVKQDGGGSKDAGQLPTHVIKNKDALDTVVSLLQVDGEELHKNVTFRTTEMRGEKFHTPLTISQAEDSRDALAKAIYGRMFTWIIQEINRIICSQKKSMGFVGVLDIFGFEIFEVNRFEQFFINYANERLQQYFNQHIFKLEQDEYTAEGIDWASITFADNQPCLDLISKKPVGVLSLLDEESNFPQGSDKSFLAKMDQQQAKHQNYEVSKLKKDHFGILHYAGKVLYDTTNFLDKNRDTLRADLKECIRKSGNAFISSLMVDAPVVADTGAATKRAGGGGGARLLTVGAQFQNSLNELMKTLSESNPFFVRCLKPNSRKVPVEFDGEMVLHQLRYSGMMETVRIRSLGYPVRRVFDQFAKRYNVLVPPGTDMKDYKRASIAIINSIGLQPNQFQIGKSKVFFKDNVDSILEKRRDEKLKVVVLKLQRWWRARLCRLRFLRARAAAKKIQRYYKTRFLRKKFIRTKKLIVKMQSRVRGAACRRRLERLKKAAAKQALARKQSTMDGVGAVAGDDGGAGADGLVGEDGAPVSGSSGEDSLDIFERVALMELDVCLGLIDEADFVRMREEMVQKEIAGIEEELGSGDITQKGFDKKKAQLLALTGTSATSTDVIGAVDFQGLVSKDATDSYQKYAETNFQKDITAEHSKDPIPHSIHQMPADLSYAAVEAFK # PASA_UPDATE: g9505.t1, single gene model update, valid-1, status:[pasa:asmbl_7879,status:12], valid-1 NODE_5129_length_1008_cov_29.7224 . gene 146 894 . + . ID=g9505;Name=g9505.t1 NODE_5129_length_1008_cov_29.7224 . mRNA 146 894 . + . ID=g9505.t1;Parent=g9505;Name=g9505.t1 NODE_5129_length_1008_cov_29.7224 . exon 146 439 . + . ID=g9505.t1.exon1;Parent=g9505.t1 NODE_5129_length_1008_cov_29.7224 . CDS 146 439 . + 0 ID=cds.g9505.t1;Parent=g9505.t1;5_prime_partial=true NODE_5129_length_1008_cov_29.7224 . exon 628 723 . + . ID=g9505.t1.exon2;Parent=g9505.t1 NODE_5129_length_1008_cov_29.7224 . CDS 628 723 . + 0 ID=cds.g9505.t1;Parent=g9505.t1 NODE_5129_length_1008_cov_29.7224 . exon 859 894 . + . ID=g9505.t1.exon3;Parent=g9505.t1 NODE_5129_length_1008_cov_29.7224 . CDS 859 894 . + 0 ID=cds.g9505.t1;Parent=g9505.t1 #PROT g9505.t1 g9505 VPDWSFDVAMDFDAINKLMDAFVNSIKTIPVIGDQIMKVDWVKKALSFRLNTIAMQGLSLQNIAQGIFPTVSLSYTFADQGIRSVSITVPRLDRKVLQVLAEAVGFPSCVIDSDCKADAKERCYHPLNGKSELWTVLVKYF* # ORIGINAL: g9489.t1 original gene structure, not modified by PASA NODE_2126_length_7594_cov_40.6131 AUGUSTUS gene 127 6186 . - . ID=g9489;Name=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS mRNA 127 6186 . - . ID=g9489.t1;Parent=g9489;Name=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 6111 6186 . - . ID=g9489.t1.exon1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 6111 6186 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 5587 5910 . - . ID=g9489.t1.exon2;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 5587 5910 . - 2 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 5082 5401 . - . ID=g9489.t1.exon3;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 5082 5401 . - 2 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 4657 4749 . - . ID=g9489.t1.exon4;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 4657 4749 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 4038 4294 . - . ID=g9489.t1.exon5;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 4038 4294 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 3413 3674 . - . ID=g9489.t1.exon6;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 3413 3674 . - 1 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 2965 3153 . - . ID=g9489.t1.exon7;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 2965 3153 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 2558 2702 . - . ID=g9489.t1.exon8;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 2558 2702 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 1444 1607 . - . ID=g9489.t1.exon9;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 1444 1607 . - 2 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 1097 1121 . - . ID=g9489.t1.exon10;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 1097 1121 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 630 913 . - . ID=g9489.t1.exon11;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 630 913 . - 2 ID=cds.g9489.t1;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS exon 127 396 . - . ID=g9489.t1.exon12;Parent=g9489.t1 NODE_2126_length_7594_cov_40.6131 AUGUSTUS CDS 127 396 . - 0 ID=cds.g9489.t1;Parent=g9489.t1 #PROT g9489.t1 g9489 MRRQPWVNAVLAVVSAAILSLLLPEEAAAVNIPCANPTWTVLPPTTLLDNATVSAIALTCDDGATGFVTLYGTNNDLINVLLANVSLDGASPSLASFGSIKLAQGNHALHARVPSTGGTTSQFRVPFNVTVYPATFVIGYLDRNAASHDTGVYGVLLVDDIVRTDRTLLPNTTVRLHIAETGCAPVTAVRAALDFAQINGANALLGPSCSAESRQVHVIASLFKLPMLSFWSATTDLSNKLVYPFFLRGLDPLSETYDLASTISAFGWKSIALLEFDIFPYADQLFTRLSEMKVEVKAHYVVRAGTLDYSPAMRLLKQVGSRVVLLNAYNVNAQTQDFNGVIRAAIAEGLVGSGYTWIFGTSAGFSIADLLPAERLLLAGCFSVVGADAVGDTALRARIANLWNTKDLRSLAGPWGARITMSASEGQPGVPNTLDNQGSAGVDSYLTLVKAYHKLAYVDKARITQDSFLAELFRTTFYGATGTVAYDANGDRLGNGALLNYRIRNGTLDMNYKIGTIFFDALHNGVYNLSVSGFNSINDTGRIVWSHGLTSVPPAWRVVGAAVGASGGIALLAIIVGVMLIRRRKSASLLGHENWVVNIQDVKFERIIGQGSFGDVYKARWRGSVVAVKTISGALIGLPSMDGRASNGEMVPLNLISGVTADPTLADDDRKRANQGSMRHSAEEKDPDIAAYRAALGDKARVTQRERYASVVATRNKRNGAVQPWGSGKAQRSGTILHSQQQRDSELSVSGPLASLLRSLFKSFNRRAADGHMNKADREAVKEFVREIACMCGLRHPNIVMFM # PASA_UPDATE: g3715.t1, single gene model update, valid-1, status:[pasa:asmbl_6972,status:12], valid-1 NODE_4100_length_2186_cov_31.2226 . gene 122 1824 . + . ID=g3715;Name=g3715.t1 NODE_4100_length_2186_cov_31.2226 . mRNA 122 1824 . + . ID=g3715.t1;Parent=g3715;Name=g3715.t1 NODE_4100_length_2186_cov_31.2226 . five_prime_UTR 122 122 . + . ID=g3715.t1.utr5p1;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . exon 122 238 . + . ID=g3715.t1.exon1;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . CDS 123 238 . + 0 ID=cds.g3715.t1;Parent=g3715.t1;5_prime_partial=true NODE_4100_length_2186_cov_31.2226 . exon 601 648 . + . ID=g3715.t1.exon2;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . CDS 601 648 . + 1 ID=cds.g3715.t1;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . exon 896 1067 . + . ID=g3715.t1.exon3;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . CDS 896 1067 . + 1 ID=cds.g3715.t1;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . exon 1405 1539 . + . ID=g3715.t1.exon4;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . CDS 1405 1539 . + 0 ID=cds.g3715.t1;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . exon 1714 1824 . + . ID=g3715.t1.exon5;Parent=g3715.t1 NODE_4100_length_2186_cov_31.2226 . CDS 1714 1824 . + 0 ID=cds.g3715.t1;Parent=g3715.t1;3_prime_partial=true #PROT g3715.t1 g3715 RSSVKRADISKFVMGEHGRATGAIIDAAQKRLEDTFGARLEPLPSGDKPAEPLKRGGASQAEASGSGQFAAKAYALLRTSKIGDEADYVASEAELPRMGFLLVLLILIRMSQNALPDQKLWEVLGRLGVQKGKDCGVGDPDKAIKEFERQLYIDRVKTSEGAAGDSTLATYEYRWGARAKVELDARDIISIAAQ # ORIGINAL: g1873.t1 original gene structure, not modified by PASA NODE_1675_length_9843_cov_37.3814 AUGUSTUS gene 2053 9093 . + . ID=g1873;Name=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS mRNA 2053 9093 . + . ID=g1873.t1;Parent=g1873;Name=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 2053 2404 . + . ID=g1873.t1.exon1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 2053 2404 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 2598 2746 . + . ID=g1873.t1.exon2;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 2598 2746 . + 2 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 3000 3078 . + . ID=g1873.t1.exon3;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 3000 3078 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 3263 3537 . + . ID=g1873.t1.exon4;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 3263 3537 . + 2 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 3811 4342 . + . ID=g1873.t1.exon5;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 3811 4342 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 4587 5479 . + . ID=g1873.t1.exon6;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 4587 5479 . + 2 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 5810 6763 . + . ID=g1873.t1.exon7;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 5810 6763 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 7073 7594 . + . ID=g1873.t1.exon8;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 7073 7594 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 7899 7971 . + . ID=g1873.t1.exon9;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 7899 7971 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 8287 8432 . + . ID=g1873.t1.exon10;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 8287 8432 . + 2 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 8692 8726 . + . ID=g1873.t1.exon11;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 8692 8726 . + 0 ID=cds.g1873.t1;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS exon 9036 9093 . + . ID=g1873.t1.exon12;Parent=g1873.t1 NODE_1675_length_9843_cov_37.3814 AUGUSTUS CDS 9036 9093 . + 1 ID=cds.g1873.t1;Parent=g1873.t1 #PROT g1873.t1 g1873 MEYEYELESLYDDDSMAIPDSQLAEAAALSSNNQADQATTNERFGAPPLQGELGRSANNDAVSVASSRAAVTFRCLQLSGEVTRTRGDGEGYMPQRDFGASPDERGTPMLMPSTPALEDAAITVLATGTPLRPNMQSETSQIELFETPKTTHNVVIPQTDLRADIDGNDGSGGNEDSDDGDHSYEPQSQFSPGQMAHAPVFLPSDDEDDEDNPSGGASADSNREGSNNARGVGVQLGNETFDSERTQTQTQTPVAETQVLSNNDDGDADDDTAGEEDPNDPLGLKYPLVLPPRPRAFLSDVQSATAASQQRHAEQPQQPQQQQLQQQQPQQQQPQQQQPPAKQQQLEQQLQQQQQKQSLPTLNPVARNASMEALLGPRARSSVSELSAGKDARGVSVHVPAGDTVPTDGHVDDGHVIPNDGGGALRTHHSNVESECAVRLRYSPSQGTMHVDTDDETQDSCAELKHSDGKSQLSAQSALAAAPPPDATRTAAHTPVASVSQCIIQRLGEGDSETPSANAAARDPALTFDAHTQDANDPHNRINIRVAPPSVATAEAAIAIARRLAATAICTPASASFDFAMNGDAELFSAPVMRPDRVEAVAGSNPSGGGGGVGEKAGDGGGAGGNDSLREHNRTLADASGVSVRRIASSAISGGDIASSGESVSAKPLARLRKQRSTNQVAGGDDGGTGTNKEKEGRCSPEKARVVDSNSAGANAGANGTNIDGGACAMEGIEVRDRIDHSAPSATPSAMPSAVPRERKLVARHRTVTVTRTLRETRETITVLVYDDGTTETLPPVFEDAPEKVTVDTTTYRQPEPPSRDAADPAGVVHARPRGGMPLAHPPPSSTVADKHSRDEGNAVVSSVQHSNGPNAPPLKKCNARPSQRGSGDVIADGAVGKSSVDAAGKETGHGHVDAPRPARGRKSGDGGVSGASGVEGTAHDGSVDRTRQGKRKRSQSPADNRSKRQRAPDVSVKDALATGAKSRRLDGGKSAPRVDVRTGKAQRGTRAHGRDGRIHAEEGATDKVTGNFRSKEGGMRAEVMSDGGGNAQVTPGKRSKRGREDDGDGGVEDGAAAPQGKRYACTVGMQVLAIWADGFAYPGRIASIEAGGRVGVTYDDGDVRSVPLTEVCLPSALLDPARSDKETVFARVRKGKDGVACVIQERLPSAGKSLAFRVKSIADDRVYECALSDVSVPPQTFALCSLRGAVSIDSLPSRRAGERASVPVVASALQRRASRDFGKKELRGRDKEDGKKRSLSAIFAGWYFLVTSGEKSNSEAFDRAEITDTLSSRGGALIEELTPIHVASHRDTTALISDGPKRTQKYLQALATGIPCVSFKALRRNSGLMFLARVSPSN* # ORIGINAL: g1527.t1 original gene structure, not modified by PASA NODE_194_length_32568_cov_42.927 AUGUSTUS gene 20965 23586 . - . ID=g1527;Name=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS mRNA 20965 23586 . - . ID=g1527.t1;Parent=g1527;Name=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 22347 23586 . - . ID=g1527.t1.exon1;Parent=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 22347 23586 . - 0 ID=cds.g1527.t1;Parent=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 21887 21984 . - . ID=g1527.t1.exon2;Parent=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 21887 21984 . - 2 ID=cds.g1527.t1;Parent=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 20965 21537 . - . ID=g1527.t1.exon3;Parent=g1527.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 20965 21537 . - 0 ID=cds.g1527.t1;Parent=g1527.t1 #PROT g1527.t1 g1527 MSDAQKRNEYEGRHVAASGLLQMHTRRSSRSTPIDPDDLPLSSFRQKPRSRSASTDARQTLSQGASHGSSGTLETVGEVQEGVRALLPGDSAPAPEKVLDSSKEATTTLRLRLRRRRDDDNINENDASAGSHVQPSPGKKRRKVDVGVDVVDPALSGEIESLTSSLHIFDSETVPPETEGQAVKASMGNENSADNDVVRAEDVSVIAVSPGDSLSTCGADDQIRKLRHLASLQLRVIRWQQKRLEVRAAEARVRESAISALEGKVARLDRAATTLRTKKLAGDDKIAKLQLELQDARRLVHALQHGGGGASGEFVVRSHKKGESRDTRAAMDDTSEASRGGKYAHRDMFAKEEKGGGDGDEDEGDDVDEVEDTEAERDAYEKELMEFSKEDGAWIETTRPYFRERPVAHDEVPTPTWSQIEHSIAQPQLSRRGRNQQPAHVASSDEDTSDEAVERRHRKLEMEERRSKRWDAQLQRERRMMEASLRFSNRKAGSTTTGNAGDTSTEVTSRFSFTPDAHDALVIRVAETVPLSAFGAPLPPLDPKPFSLPTKGPNSCRRDMDSRTFGRGRGEGYGLAVAAAAVATTPRDRHYHYPSTENDASFGDASVQDAAHSDSVQRMSREERLRLRQLRAEQKT* # PASA_UPDATE: g1528.t1, single gene model update, valid-1, status:[pasa:asmbl_3091,status:3], valid-1 NODE_194_length_32568_cov_42.927 . gene 24609 25854 . - . ID=g1528;Name=g1528.t1 NODE_194_length_32568_cov_42.927 . mRNA 24609 25854 . - . ID=g1528.t1;Parent=g1528;Name=g1528.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 25736 25854 . - . ID=g1528.t1.utr5p1;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . exon 25674 25854 . - . ID=g1528.t1.exon1;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . CDS 25674 25735 . - 0 ID=cds.g1528.t1;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . exon 25448 25541 . - . ID=g1528.t1.exon2;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . CDS 25448 25541 . - 1 ID=cds.g1528.t1;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . exon 24609 25227 . - . ID=g1528.t1.exon3;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . CDS 24961 25227 . - 0 ID=cds.g1528.t1;Parent=g1528.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 24609 24960 . - . ID=g1528.t1.utr3p1;Parent=g1528.t1 #PROT g1528.t1 g1528 MPNGADKVSKYNNYVHNDAIWRQNIMNEMHFAKRWDPDYGFMKGGVDGQVEQMHAAEAARDAESDSNGRERLKLPPIHHRQSTYRNLDTTAAIVPAAPRTTASEVGWVSGVPKNNLERYGGYAKGRRNVERFLGWTGLAI* # ORIGINAL: g1522.t1 original gene structure, not modified by PASA NODE_194_length_32568_cov_42.927 AUGUSTUS gene 2445 4943 . - . ID=g1522;Name=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS mRNA 2445 4943 . - . ID=g1522.t1;Parent=g1522;Name=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 4787 4943 . - . ID=g1522.t1.exon1;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 4787 4943 . - 0 ID=cds.g1522.t1;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 4386 4579 . - . ID=g1522.t1.exon2;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 4386 4579 . - 2 ID=cds.g1522.t1;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 2995 4239 . - . ID=g1522.t1.exon3;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 2995 4239 . - 0 ID=cds.g1522.t1;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 2743 2853 . - . ID=g1522.t1.exon4;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 2743 2853 . - 0 ID=cds.g1522.t1;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 2445 2618 . - . ID=g1522.t1.exon5;Parent=g1522.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 2445 2618 . - 0 ID=cds.g1522.t1;Parent=g1522.t1 #PROT g1522.t1 g1522 MWMYAIMFVVLVYVALLLWPTPMNKAASLDNYIADPSSNAADAEQDDDDDEQELAKYKRVFTTPGKQLVIVYGTEYGFSETIARRLYDAIEPLESEGFQPRLVNLKNSAIVDFKKEQVILAVCSTTGDGVPPTDARDFFSAVTSGKIGNLSHASFSVLALGDKGYPHYCRAGRLLDEKLEALGARRFARRIDVDMEDFPAIDNWIAAVVAGIPSLGLDERIDYMDVGACADDSGFSRTNPYWARIAVKRDLCGAGEERQVVHVEFDLGDSGIEYTPGDSLGICPENNPAEVEVLLKAMRCTGTETVTAPPGCYDPKIGRKEKMPLQNALRRFYDIKTVKPELIRNLIPMSRDRRESEKGRAILMEGQSVASNSVLRAYLYGREVADVLTDFSSAKPDISDVLTHLRLLQPRYYSISSAQSVVGKRVSVTAAVVRYDSLGKARTGVCTTFLQDRRNISEECPVFIGKNPEFRLPTNGSLPIIMVGPGTGLAPFRAFLQERKITKARGDNLLYFGCRDRNKDYLYRGELEALEKEKGVILRTAFSREAGQKKVYVQHLLKQDADLVWSLLQRGAHFYVCGDAKNMAGDVHETLLDIISAKKGTSRENAEAFMADLENNKRYQRDVWIT* # PASA_UPDATE: g1526.t1, single gene model update, valid-1, status:[pasa:asmbl_3086,status:3], valid-1 NODE_194_length_32568_cov_42.927 . gene 17138 19264 . + . ID=g1526;Name=g1526.t1 NODE_194_length_32568_cov_42.927 . mRNA 17138 19264 . + . ID=g1526.t1;Parent=g1526;Name=g1526.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 17138 17428 . + . ID=g1526.t1.utr5p1;Parent=g1526.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 17614 17775 . + . ID=g1526.t1.utr5p2;Parent=g1526.t1 NODE_194_length_32568_cov_42.927 . exon 17138 17428 . + . ID=g1526.t1.exon1;Parent=g1526.t1 NODE_194_length_32568_cov_42.927 . exon 17614 19264 . + . ID=g1526.t1.exon2;Parent=g1526.t1 NODE_194_length_32568_cov_42.927 . CDS 17776 18846 . + 0 ID=cds.g1526.t1;Parent=g1526.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 18847 19264 . + . ID=g1526.t1.utr3p1;Parent=g1526.t1 #PROT g1526.t1 g1526 MVCTRFALTLVGSASPAWAVSVPPNVEAADAISALGFPRPRALLLSIGGAGNLSQEKRALLEHLYFTDIAEFVIECGASVITGGTKSGVMEMMGEGVSKVQPRPPSASLGSASRINSGASSASAANGTTARANRSVLLGILPKSKVSYDGQDHPPSADAVALEPNHTHFVLVDVDEWGGETGTLFRIANALAVQTVADNNSSAGGSQSSLNGIPRTTTTTAATCDDDADEGDDGDGKDNNHVAKKRKLRGPRVVTLLSNGGLVSKAEAHAAVSSGWPLVVIRGSGRLADDIVALVEQRTAIEDIADPLLRDIVHWKHLHIFDIGATHGTLKKLLNHLVGDGEGSPILRTVTPNKQR* # PASA_UPDATE: g1530.t1, single gene model update, valid-1, status:[pasa:asmbl_3087,status:3], valid-1 NODE_194_length_32568_cov_42.927 . gene 28554 31286 . + . ID=g1530;Name=g1530.t1 NODE_194_length_32568_cov_42.927 . mRNA 28554 31286 . + . ID=g1530.t1;Parent=g1530;Name=g1530.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 28554 28612 . + . ID=g1530.t1.utr5p1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 28554 28630 . + . ID=g1530.t1.exon1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 28613 28630 . + 0 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 28722 28765 . + . ID=g1530.t1.exon2;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 28722 28765 . + 0 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 28877 29019 . + . ID=g1530.t1.exon3;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 28877 29019 . + 1 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 29145 29167 . + . ID=g1530.t1.exon4;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 29145 29167 . + 2 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 29293 29445 . + . ID=g1530.t1.exon5;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 29293 29445 . + 0 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 29650 29789 . + . ID=g1530.t1.exon6;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 29650 29789 . + 0 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 29937 30127 . + . ID=g1530.t1.exon7;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 29937 30127 . + 1 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 30246 30326 . + . ID=g1530.t1.exon8;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 30246 30326 . + 2 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 30486 30645 . + . ID=g1530.t1.exon9;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 30486 30645 . + 2 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 30779 30833 . + . ID=g1530.t1.exon10;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 30779 30833 . + 1 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . exon 30964 31286 . + . ID=g1530.t1.exon11;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . CDS 30964 31059 . + 0 ID=cds.g1530.t1;Parent=g1530.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 31060 31286 . + . ID=g1530.t1.utr3p1;Parent=g1530.t1 #PROT g1530.t1 g1530 MIKAKKFDIAESNIANLGSDLEKKVKLAAAETEPAWKNAGKKVGIEIWRIEKFTVKSWAKEQYGKFYGGDSYIVLRTYKKDPASEKLSWDVHFWIGDESTQDEYGTAAYKTVELDDVLGGEPVQHREIQGHESALFLSYFPKLEIMSGGIESGFKHVKPEEYRPRLLHLKGKKNILVREVPLERGSLNSGDVFVLDAGLKLYQWNGSKAGGMEKQKGAELCRAIDDERKGLPTVHVFEEGDKDKDIEVFWKTIGGEGPVKSAEEGGSDEASSSVPKRLFHLSDASGKLEFKEVKPFTRKSLDTKDVFVYDAGFEVFVWVGKGASAQEKAKGLGYASDYLFQNNRPKHLPISRVMEGGENEVFEAAFK* # ORIGINAL: g1531.t1 original gene structure, not modified by PASA NODE_194_length_32568_cov_42.927 AUGUSTUS gene 31805 32491 . + . ID=g1531;Name=g1531.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS mRNA 31805 32491 . + . ID=g1531.t1;Parent=g1531;Name=g1531.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 31805 32491 . + . ID=g1531.t1.exon1;Parent=g1531.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 31805 32491 . + 0 ID=cds.g1531.t1;Parent=g1531.t1 #PROT g1531.t1 g1531 MSAFKMRLLRDDDEDEDDSHHANSDFGHGGLSAGVSSSGVGSMNSLISAESPVDKRKGGKHARAKGNGKGKERAGGNKNEQRLQFHDDDGDTAAAAKGAPTNHTNAHLGVDAHSDAHSDAHSDVHSEGHPEGDDAFDRDDDDGFDDADGIDDVSLFRGPHRRRHHRGARGEEDFPDVLETEDRSLLDKILKDPRLYLGTAYESVRQAGWWKRAAMKLLDFFMFNFTFFQ # ORIGINAL: g1521.t1 original gene structure, not modified by PASA NODE_194_length_32568_cov_42.927 AUGUSTUS gene 126 1545 . - . ID=g1521;Name=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS mRNA 126 1545 . - . ID=g1521.t1;Parent=g1521;Name=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 1399 1545 . - . ID=g1521.t1.exon1;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 1399 1545 . - 0 ID=cds.g1521.t1;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 1048 1174 . - . ID=g1521.t1.exon2;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 1048 1174 . - 0 ID=cds.g1521.t1;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 842 878 . - . ID=g1521.t1.exon3;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 842 878 . - 2 ID=cds.g1521.t1;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 464 622 . - . ID=g1521.t1.exon4;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 464 622 . - 1 ID=cds.g1521.t1;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 126 201 . - . ID=g1521.t1.exon5;Parent=g1521.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 126 201 . - 1 ID=cds.g1521.t1;Parent=g1521.t1 #PROT g1521.t1 g1521 MSAATPAPLENVAKRANNPSYKCRNGCNFFGNPAWQGYCSKCYKAILDKQHHQQPLPQVRPPEKRAGDGAEPSKGAENDQLNTFFQEVARSDTPDGRKAESTTSTRIRTLLRKIRIASDGTPTVDSGASRPRAYSFEDFLGTMRDPRAQDIVAKTKTFIERFLANEGLSIEEKAESVQSMLQ # PASA_UPDATE: g1529.t1, single gene model update, valid-1, status:[pasa:asmbl_3093,status:12], valid-1 NODE_194_length_32568_cov_42.927 . gene 26492 27389 . + . ID=g1529;Name=g1529.t1 NODE_194_length_32568_cov_42.927 . mRNA 26492 27389 . + . ID=g1529.t1;Parent=g1529;Name=g1529.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 26492 26552 . + . ID=g1529.t1.utr5p1;Parent=g1529.t1 NODE_194_length_32568_cov_42.927 . exon 26492 27389 . + . ID=g1529.t1.exon1;Parent=g1529.t1 NODE_194_length_32568_cov_42.927 . CDS 26553 27185 . + 0 ID=cds.g1529.t1;Parent=g1529.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 27186 27389 . + . ID=g1529.t1.utr3p1;Parent=g1529.t1 #PROT g1529.t1 g1529 MGRLWLGACMGFGKRSRATNIVVPELHYETTEHISTEWSIDKLARSSESHYSSCEEPPRSPSRHNIPPLQEKMESRVIMEKHSGLLETMRRRKTSINSVLTIDSHSPSRVESSPLGTPSDIIAKHGELLETLRRRRMSKDLLLGVGATMGGRPCCLDTQDFTKTRSLFVAGVRGLCPDDDHTFLSAATLKNPRSYSEADVRTVPVHNALF* # PASA_UPDATE: g1525.t1, single gene model update, valid-1, status:[pasa:asmbl_3090,status:12], valid-1 # PASA_UPDATE: g1525.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_3088,status:12], valid-1 # PASA_UPDATE: g1525.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_3089,status:12],[pasa:asmbl_3092,status:13], valid-1 NODE_194_length_32568_cov_42.927 . gene 10983 16709 . - . ID=g1525;Name=g1525.t1 NODE_194_length_32568_cov_42.927 . mRNA 11475 16709 . - . ID=g1525.t1;Parent=g1525;Name=g1525.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 16358 16709 . - . ID=g1525.t1.utr5p1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 16324 16709 . - . ID=g1525.t1.exon1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 16324 16357 . - 0 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 15974 16180 . - . ID=g1525.t1.exon2;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 15974 16180 . - 2 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 15815 15855 . - . ID=g1525.t1.exon3;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 15815 15855 . - 2 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 13599 15637 . - . ID=g1525.t1.exon4;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 13599 15637 . - 0 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 13246 13405 . - . ID=g1525.t1.exon5;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 13246 13405 . - 1 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 12832 13026 . - . ID=g1525.t1.exon6;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 12832 13026 . - 0 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 11860 12551 . - . ID=g1525.t1.exon7;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . CDS 12207 12551 . - 0 ID=cds.g1525.t1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . exon 11475 11562 . - . ID=g1525.t1.exon8;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 11860 12206 . - . ID=g1525.t1.utr3p1;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 11475 11562 . - . ID=g1525.t1.utr3p2;Parent=g1525.t1 NODE_194_length_32568_cov_42.927 . mRNA 10983 16477 . - . ID=g1525.t1.1.5b6be70a;Parent=g1525;Name=g1525.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 16089 16477 . - . ID=g1525.t1.1.5b6be70a.utr5p1;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 15974 16477 . - . ID=g1525.t1.1.5b6be70a.exon1;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 15974 16088 . - 0 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 15815 15855 . - . ID=g1525.t1.1.5b6be70a.exon2;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 15815 15855 . - 2 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 13599 15637 . - . ID=g1525.t1.1.5b6be70a.exon3;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 13599 15637 . - 0 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 13246 13405 . - . ID=g1525.t1.1.5b6be70a.exon4;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 13246 13405 . - 1 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 12832 13026 . - . ID=g1525.t1.1.5b6be70a.exon5;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 12832 13026 . - 0 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 11860 12551 . - . ID=g1525.t1.1.5b6be70a.exon6;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 12207 12551 . - 0 ID=cds.g1525.t1.1.5b6be70a;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 11281 11562 . - . ID=g1525.t1.1.5b6be70a.exon7;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . exon 10983 11066 . - . ID=g1525.t1.1.5b6be70a.exon8;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 11860 12206 . - . ID=g1525.t1.1.5b6be70a.utr3p1;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 11281 11562 . - . ID=g1525.t1.1.5b6be70a.utr3p2;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 10983 11066 . - . ID=g1525.t1.1.5b6be70a.utr3p3;Parent=g1525.t1.1.5b6be70a NODE_194_length_32568_cov_42.927 . mRNA 10983 16709 . - . ID=g1525.t1.2.5b6be70a;Parent=g1525;Name=g1525.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 15110 16709 . - . ID=g1525.t1.2.5b6be70a.utr5p1;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 13599 16709 . - . ID=g1525.t1.2.5b6be70a.exon1;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 13599 15109 . - 0 ID=cds.g1525.t1.2.5b6be70a;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 13246 13405 . - . ID=g1525.t1.2.5b6be70a.exon2;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 13246 13405 . - 1 ID=cds.g1525.t1.2.5b6be70a;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 12832 13026 . - . ID=g1525.t1.2.5b6be70a.exon3;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 12832 13026 . - 0 ID=cds.g1525.t1.2.5b6be70a;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 11860 12551 . - . ID=g1525.t1.2.5b6be70a.exon4;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . CDS 12207 12551 . - 0 ID=cds.g1525.t1.2.5b6be70a;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 11281 11562 . - . ID=g1525.t1.2.5b6be70a.exon5;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . exon 10983 11066 . - . ID=g1525.t1.2.5b6be70a.exon6;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 11860 12206 . - . ID=g1525.t1.2.5b6be70a.utr3p1;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 11281 11562 . - . ID=g1525.t1.2.5b6be70a.utr3p2;Parent=g1525.t1.2.5b6be70a NODE_194_length_32568_cov_42.927 . three_prime_UTR 10983 11066 . - . ID=g1525.t1.2.5b6be70a.utr3p3;Parent=g1525.t1.2.5b6be70a #PROT g1525.t1 g1525 MSGISTWTEADVAKWLVGIDAAFQRYVPAFAENNITGKRLVGMTFEKLEKIGVISLGHREDIMERVASLSKEVTSTAAPKASLTIPEASPAPAPAAIAGLWDALTAEFADEIGKFVRVLNGGPAEQLFPQTISLVQYLSKVLKAIDASPCSSDSAIASLRGLVVDNASLFTQRAKALAAAGGKDAEGIKLVTESILAIGRTVKSVIATIVATETSAAQPRSPSFSQQQPRSSSFSQQQPRSSSFSQQPQPPGSPRPSADYGSGQRPSTTSMPSPRPSVDSTATMRLTGDDIPKLNVRQLKEHLSAIGVDSSECVEKHELVSLLTFSIETKGGGALRQSNKDKEACQRVEDELAKRRVMQKHLDDIATLNAESLEKTLSSSQKLLEERASAMQLLLSRNNSTPDDVASSISPLFDALFATMDTCDAASVSAMPPRRAVHGAASTVSQNLLTRTYPAASYALTGLLRASAEYIKFTVDRARNPSSLKEEADRKKQYETWRKSRVEHGDGPKVKDTVALSVTLCGGGVITLPDRSRTLEKGDEYKFEARLLDKVGEVKMQLAEMLGIPPAAIDFRVAARSLPNRSTLAENDIVEGANIFMFLVEEGFDADASNSNMRKPSTLSTASGDRKASSVSVSSAKLDVRGSPATRKASAVSVKSADGNGSPAVSRKVSTDDRPDGGNDNDEEDDENTQEEVVDPKVLAARTQIDGLKVEVEKVQREFDFASRRFDTMKASRGSDKKVAKATMKVQGQKLDLLRNEILKLQMSVGDDDVEKRGWLVRTKMKNKVVKDSKWKKRFCVLQSEIKMWDGNRAIRDVVLLCYKEDPQKSANAELEMSIDLRESRADLALFYRKKEHVFYVTTNVKDWVFQAESAADMLQWVKAIQTSVHGKGDQMVVPTAGVQSPAAAKKRAAGSGGDANSVDPMDLVIRAYDEGDRRERAIASCEYIPINAGSKDLEFGVNDVIIVSKKNADGWWEGECRGKTGQFPSSFVEILDIEKLKAKKKASVS* #PROT g1525.t1.1.5b6be70a g1525 MTFEKLEKIGVISLGHREDIMERVASLSKEVTSTAAPKASLTIPEASPAPAPAAIAGLWDALTAEFADEIGKFVRVLNGGPAEQLFPQTISLVQYLSKVLKAIDASPCSSDSAIASLRGLVVDNASLFTQRAKALAAAGGKDAEGIKLVTESILAIGRTVKSVIATIVATETSAAQPRSPSFSQQQPRSSSFSQQQPRSSSFSQQPQPPGSPRPSADYGSGQRPSTTSMPSPRPSVDSTATMRLTGDDIPKLNVRQLKEHLSAIGVDSSECVEKHELVSLLTFSIETKGGGALRQSNKDKEACQRVEDELAKRRVMQKHLDDIATLNAESLEKTLSSSQKLLEERASAMQLLLSRNNSTPDDVASSISPLFDALFATMDTCDAASVSAMPPRRAVHGAASTVSQNLLTRTYPAASYALTGLLRASAEYIKFTVDRARNPSSLKEEADRKKQYETWRKSRVEHGDGPKVKDTVALSVTLCGGGVITLPDRSRTLEKGDEYKFEARLLDKVGEVKMQLAEMLGIPPAAIDFRVAARSLPNRSTLAENDIVEGANIFMFLVEEGFDADASNSNMRKPSTLSTASGDRKASSVSVSSAKLDVRGSPATRKASAVSVKSADGNGSPAVSRKVSTDDRPDGGNDNDEEDDENTQEEVVDPKVLAARTQIDGLKVEVEKVQREFDFASRRFDTMKASRGSDKKVAKATMKVQGQKLDLLRNEILKLQMSVGDDDVEKRGWLVRTKMKNKVVKDSKWKKRFCVLQSEIKMWDGNRAIRDVVLLCYKEDPQKSANAELEMSIDLRESRADLALFYRKKEHVFYVTTNVKDWVFQAESAADMLQWVKAIQTSVHGKGDQMVVPTAGVQSPAAAKKRAAGSGGDANSVDPMDLVIRAYDEGDRRERAIASCEYIPINAGSKDLEFGVNDVIIVSKKNADGWWEGECRGKTGQFPSSFVEILDIEKLKAKKKASVS* #PROT g1525.t1.2.5b6be70a g1525 MPSPRPSVDSTATMRLTGDDIPKLNVRQLKEHLSAIGVDSSECVEKHELVSLLTFSIETKGGGALRQSNKDKEACQRVEDELAKRRVMQKHLDDIATLNAESLEKTLSSSQKLLEERASAMQLLLSRNNSTPDDVASSISPLFDALFATMDTCDAASVSAMPPRRAVHGAASTVSQNLLTRTYPAASYALTGLLRASAEYIKFTVDRARNPSSLKEEADRKKQYETWRKSRVEHGDGPKVKDTVALSVTLCGGGVITLPDRSRTLEKGDEYKFEARLLDKVGEVKMQLAEMLGIPPAAIDFRVAARSLPNRSTLAENDIVEGANIFMFLVEEGFDADASNSNMRKPSTLSTASGDRKASSVSVSSAKLDVRGSPATRKASAVSVKSADGNGSPAVSRKVSTDDRPDGGNDNDEEDDENTQEEVVDPKVLAARTQIDGLKVEVEKVQREFDFASRRFDTMKASRGSDKKVAKATMKVQGQKLDLLRNEILKLQMSVGDDDVEKRGWLVRTKMKNKVVKDSKWKKRFCVLQSEIKMWDGNRAIRDVVLLCYKEDPQKSANAELEMSIDLRESRADLALFYRKKEHVFYVTTNVKDWVFQAESAADMLQWVKAIQTSVHGKGDQMVVPTAGVQSPAAAKKRAAGSGGDANSVDPMDLVIRAYDEGDRRERAIASCEYIPINAGSKDLEFGVNDVIIVSKKNADGWWEGECRGKTGQFPSSFVEILDIEKLKAKKKASVS* # ORIGINAL: g1523.t1 original gene structure, not modified by PASA NODE_194_length_32568_cov_42.927 AUGUSTUS gene 5798 7987 . + . ID=g1523;Name=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS mRNA 5798 7987 . + . ID=g1523.t1;Parent=g1523;Name=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 5798 6031 . + . ID=g1523.t1.exon1;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 5798 6031 . + 0 ID=cds.g1523.t1;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 6145 6372 . + . ID=g1523.t1.exon2;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 6145 6372 . + 0 ID=cds.g1523.t1;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 6576 7260 . + . ID=g1523.t1.exon3;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 6576 7260 . + 0 ID=cds.g1523.t1;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 7438 7579 . + . ID=g1523.t1.exon4;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 7438 7579 . + 2 ID=cds.g1523.t1;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS exon 7759 7987 . + . ID=g1523.t1.exon5;Parent=g1523.t1 NODE_194_length_32568_cov_42.927 AUGUSTUS CDS 7759 7987 . + 1 ID=cds.g1523.t1;Parent=g1523.t1 #PROT g1523.t1 g1523 MEHIQPYIDQAVAVANPLIQEALAHPTVQKIVSHPYIAEQHPAVLASVAILGLYIVLRIIKSIFRRFRRFPRIYPEEARNAPGYYDVAIVGAGPSGSTCAWYMAKDKKAKVLLLERKQFPRDKYCGDAVCKTAIEILQEMGVYDQLLKENKAHVADSGGMVSPGGLRFIGRSHEQLGAIPAAIAVKRIHLDEAIAAAAKKAGADLRENMDVIDAKFDKKAGMWTVYIDDEKKTTFKARTLVCADGAPSKLATHLGYVNTPPQGSCSRAFVEGGTHNLKADGVVYYNKDLLPGYAALFRHPNDELNYCCYLIPGNPNVKNEDLAYWHEYLIKKDPAVSQALGNKFKMEKMRAGSLRLGGIPVSHDDHLIIVGDAAGMIDPMTGEGIHHAMDGGRIAAKHLLNAVKTGNFSRAFLQQYHDDWMNTFGHDFAWSMNICQILYRFPILIDAATAAVLRKGDKFLARWADIMTGRVPKIHLLRPEFVIVITFELFLLLGKRLIGVKPKTQ* # PASA_UPDATE: g1524.t1, single gene model update, valid-1, status:[pasa:asmbl_3085,status:3], valid-1 NODE_194_length_32568_cov_42.927 . gene 8887 10960 . + . ID=g1524;Name=g1524.t1 NODE_194_length_32568_cov_42.927 . mRNA 8887 10960 . + . ID=g1524.t1;Parent=g1524;Name=g1524.t1 NODE_194_length_32568_cov_42.927 . five_prime_UTR 8887 9356 . + . ID=g1524.t1.utr5p1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . exon 8887 9690 . + . ID=g1524.t1.exon1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . CDS 9357 9690 . + 0 ID=cds.g1524.t1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . exon 9877 9975 . + . ID=g1524.t1.exon2;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . CDS 9877 9975 . + 2 ID=cds.g1524.t1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . exon 10269 10337 . + . ID=g1524.t1.exon3;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . CDS 10269 10337 . + 2 ID=cds.g1524.t1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . exon 10514 10559 . + . ID=g1524.t1.exon4;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . CDS 10514 10559 . + 2 ID=cds.g1524.t1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . exon 10718 10960 . + . ID=g1524.t1.exon5;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . CDS 10718 10772 . + 1 ID=cds.g1524.t1;Parent=g1524.t1 NODE_194_length_32568_cov_42.927 . three_prime_UTR 10773 10960 . + . ID=g1524.t1.utr3p1;Parent=g1524.t1 #PROT g1524.t1 g1524 MGAKLSTGGSDDNLPSATPSYRTHSSFSSSGASSSASRGGPSTAQHRHVAGGPRGGSSTVAYRSRATTAPTSILGAAMAASGSSDYRSDALFFGYPMGQDRSMTMHSKPSNGVACPVCNATFRELAKLERHLAECLPRACVGYNEDVLVSSMSGDVECSICLEPFEKGNTIARLPCLCMYHKICIDKWFLKCRTCPEHPG* # ORIGINAL: g4572.t1 original gene structure, not modified by PASA NODE_3373_length_3601_cov_34.7777 AUGUSTUS gene 178 3085 . - . ID=g4572;Name=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS mRNA 178 3085 . - . ID=g4572.t1;Parent=g4572;Name=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 2979 3085 . - . ID=g4572.t1.exon1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 2979 3085 . - 0 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 2453 2669 . - . ID=g4572.t1.exon2;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 2453 2669 . - 1 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 2039 2101 . - . ID=g4572.t1.exon3;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 2039 2101 . - 0 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 1717 1815 . - . ID=g4572.t1.exon4;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 1717 1815 . - 0 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 1133 1285 . - . ID=g4572.t1.exon5;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 1133 1285 . - 0 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 724 925 . - . ID=g4572.t1.exon6;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 724 925 . - 0 ID=cds.g4572.t1;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS exon 178 553 . - . ID=g4572.t1.exon7;Parent=g4572.t1 NODE_3373_length_3601_cov_34.7777 AUGUSTUS CDS 178 553 . - 2 ID=cds.g4572.t1;Parent=g4572.t1 #PROT g4572.t1 g4572 MASYHTFLLTLAVLAIIAVFGAADAVVYRAAVVQISPTFGGPGQKTREEALAIMNQNIDKYEHFLKIAAANGSQIVVFPEDGLYGDDFDTRESLYPFTEPIPDPTGGKFNPCVDDGYEDRPITKRFSCLARTYGVVLLADMVDLELCNNATDPLCPADGKYQYNTQVAFAEDGVLLARYHKSHLFYEEPMFDQPPKPDPTFFDASFGVRFGMIICFDMMFGYPTQSYVHEMGIKNIVQSTWFENIPPLFSAPQVQQAYSRTWGVNMIAANSGHTFMQSGSGIYTNGEWVAYHYDPKTSGDDAMVVADVDSELAALSNARPLYVVGMGGEPSAPVRGDRFKMDGVDGIQKQMERQMETESGAALDIKWRPAWLPYLKMVTFEAKAGSNGSVAVETDGLRCELDYTV # ORIGINAL: g758.t1 original gene structure, not modified by PASA NODE_3007_length_4545_cov_38.5391 AUGUSTUS gene 1734 4303 . - . ID=g758;Name=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS mRNA 1734 4303 . - . ID=g758.t1;Parent=g758;Name=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 4084 4303 . - . ID=g758.t1.exon1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 4084 4303 . - 2 ID=cds.g758.t1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 3619 3764 . - . ID=g758.t1.exon2;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 3619 3764 . - 1 ID=cds.g758.t1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 3087 3213 . - . ID=g758.t1.exon3;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 3087 3213 . - 2 ID=cds.g758.t1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 2607 2730 . - . ID=g758.t1.exon4;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 2607 2730 . - 1 ID=cds.g758.t1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 2054 2227 . - . ID=g758.t1.exon5;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 2054 2227 . - 0 ID=cds.g758.t1;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS exon 1734 1781 . - . ID=g758.t1.exon6;Parent=g758.t1 NODE_3007_length_4545_cov_38.5391 AUGUSTUS CDS 1734 1781 . - 0 ID=cds.g758.t1;Parent=g758.t1 #PROT g758.t1 g758 CAFNSLLTDFAANGTDEGVALTTFNNITSELFLEFINSTIPERNVTGVELLMGQAEANSNAPVLFKWDSANNIFNSRLPFAQYIALNETSQDALFTKDIGALIMSTAQPGGQLGGQLESPQVYEFYAVLNGTNAVPPSGVNFTGILYAVFDNTSHLLVVETVRSDIPFGEMTSAGLGAAPAGQNGTVAAPLSRGTAPNATIESDQIVFLLSNNVEALFNGDMYVFISTANGEIRGQLEPLPKSNGTATTSGGVQNITSSSNALCVPIIVPDSPPALHW* # PASA_UPDATE: g7391.t1, single gene model update, valid-1, status:[pasa:asmbl_8463,status:12],[pasa:asmbl_8464,status:12], valid-1 NODE_608_length_20280_cov_41.6627 . gene 19410 20280 . - . ID=g7391;Name=g7391.t1 NODE_608_length_20280_cov_41.6627 . mRNA 19410 20280 . - . ID=g7391.t1;Parent=g7391;Name=g7391.t1 NODE_608_length_20280_cov_41.6627 . exon 20089 20280 . - . ID=g7391.t1.exon1;Parent=g7391.t1 NODE_608_length_20280_cov_41.6627 . CDS 20089 20280 . - 0 ID=cds.g7391.t1;Parent=g7391.t1;5_prime_partial=true NODE_608_length_20280_cov_41.6627 . exon 19410 19812 . - . ID=g7391.t1.exon2;Parent=g7391.t1 NODE_608_length_20280_cov_41.6627 . CDS 19636 19812 . - 0 ID=cds.g7391.t1;Parent=g7391.t1 NODE_608_length_20280_cov_41.6627 . three_prime_UTR 19410 19635 . - . ID=g7391.t1.utr3p1;Parent=g7391.t1 #PROT g7391.t1 g7391 PPPPLSLQSGRSDWNITAFTAYCRKRWGVTPRPDWAPTYFWGRDLSSASNIVFSNGMLDPWSGGSILESVSDSVVAVNIAEGAHHLDLRASNPADPPSVIAARQVERDFIRRWIEEKPKTKH* # ORIGINAL: g7385.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 1627 4754 . - . ID=g7385;Name=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 1627 4754 . - . ID=g7385.t1;Parent=g7385;Name=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 4641 4754 . - . ID=g7385.t1.exon1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 4641 4754 . - 0 ID=cds.g7385.t1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 4477 4542 . - . ID=g7385.t1.exon2;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 4477 4542 . - 0 ID=cds.g7385.t1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 4044 4256 . - . ID=g7385.t1.exon3;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 4044 4256 . - 0 ID=cds.g7385.t1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 3469 3938 . - . ID=g7385.t1.exon4;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 3469 3938 . - 0 ID=cds.g7385.t1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 3124 3335 . - . ID=g7385.t1.exon5;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 3124 3335 . - 1 ID=cds.g7385.t1;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 1627 2975 . - . ID=g7385.t1.exon6;Parent=g7385.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 1627 2975 . - 2 ID=cds.g7385.t1;Parent=g7385.t1 #PROT g7385.t1 g7385 MEFGSDFILAGCAGEKEEVEIRNQGVLSTQRATVGDDNETCLIDMLDTAGQEEYSSMRDMDKDHGDVPMVLVGNKCDLEEHRQVSKADGLRLAAEFKAGFFETSAKKRLNIEEVVHDLIRRTPRNSGKEYKVVITGAGGVGKSAFCVQFVQGHFVDEYDPTIEDSYRKQIVVHGIPREMIGANGIRRRSKRTLLSRIFGCTSSQSDDIDTVLSSSTTGGASEHSRRVKCTRTDTNVGVITLGSHVTGESTTVFKPTTGEAIMCGKCAAIMTSFSKPIRNMNGQLNWECEFCGTVNKPDAWDEEIPRAAALSFELAGATVTGDIKTSPTSAPRKSVGLVVFCVDTSGSMAVTTEIPQLQLEWKRLRGSGGSSTRDFISRLKCVQTAVQRQIERIAAQDPLTRIALVTFGSEVTCFMDAMEEHVFAGDKLSDRNLLIEKGRELAKSLAPVKLTQTLLLERLRALEERGGTALGPALAIAAGMCAAAGGGEVFVCSDGLPNIALGAVSDADTAHGSSATDQEARRFYESMGAFAAENGTSISVIGLEGTGGCGLEYLRGCARATSGTVTLLHPLELVRQIRVISQNPVVATGADITIIAPAGISAEIVGRGSAGKATVHMANVNASTDIAVRFHVPDMPRVSPGSELPFQVQMAYTRCKDGARVMNVVTHTLRITRSRSAAEETCNVAVVSLACVQQAASIAEKGNYDDAQRVLACTERLLSRSAKSDRQQEEFYILAAEGAALDAEIARCRTGGKAGDSAAKEFAALREAPLTMFLSGAAKKEAVKRRMAAAAAQPELSAQYYAYRFDA* # ORIGINAL: g7388.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 10884 12440 . + . ID=g7388;Name=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 10884 12440 . + . ID=g7388.t1;Parent=g7388;Name=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 10884 10970 . + . ID=g7388.t1.exon1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 10884 10970 . + 0 ID=cds.g7388.t1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 11050 11146 . + . ID=g7388.t1.exon2;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 11050 11146 . + 0 ID=cds.g7388.t1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 11227 11376 . + . ID=g7388.t1.exon3;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 11227 11376 . + 2 ID=cds.g7388.t1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 11743 11816 . + . ID=g7388.t1.exon4;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 11743 11816 . + 2 ID=cds.g7388.t1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 11894 12044 . + . ID=g7388.t1.exon5;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 11894 12044 . + 0 ID=cds.g7388.t1;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 12265 12440 . + . ID=g7388.t1.exon6;Parent=g7388.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 12265 12440 . + 2 ID=cds.g7388.t1;Parent=g7388.t1 #PROT g7388.t1 g7388 MATRKNLCNIKGISEAKMEKMKEAAAKMLDNGFITALEFSVRRQNIFQIGTGSVELNKLLGGGMESMAITEIFGEFRTGKTQICHTLCITTQLPAELGGAGGKVAYIDTEVSEHQMDLINMCAAKFAEERGIYRLLIIDSVMAMFRVDFCGRGELADRQQKLGQMLSRLMKLAEEFNIAVVITNQANPKKPIGGNIIAHASTTRLYLRKGRGETRVCKIYDSPNLPESEAMFAITEGGITDGKD* # ORIGINAL: g7390.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 16760 19046 . + . ID=g7390;Name=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 16760 19046 . + . ID=g7390.t1;Parent=g7390;Name=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 16760 17117 . + . ID=g7390.t1.exon1;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 16760 17117 . + 0 ID=cds.g7390.t1;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 17516 17793 . + . ID=g7390.t1.exon2;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 17516 17793 . + 2 ID=cds.g7390.t1;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 18075 18221 . + . ID=g7390.t1.exon3;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 18075 18221 . + 0 ID=cds.g7390.t1;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 18702 18751 . + . ID=g7390.t1.exon4;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 18702 18751 . + 0 ID=cds.g7390.t1;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 19004 19046 . + . ID=g7390.t1.exon5;Parent=g7390.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 19004 19046 . + 1 ID=cds.g7390.t1;Parent=g7390.t1 #PROT g7390.t1 g7390 MAMFKPLGGSDSDSDAGSDDADRGDSSKGPPGPPHILHSQSPPALANHSALANDAALDADDTCGTDDEHMGGNLNDTENREYRGDLRDRFAALKARRAAVTKRSTARRTKKLKKQALDAVRDSFTDPADIIVFEEYGVRKEHLLSHKGSANVSNANDNTNGINANSHRAGKSAHRSQSFGRDGQSELAALAPFIDINSRLNDVSHGPLASRPSRIDREIQAAITAGDFELADRLNTRAAHVETEEKLAEARRAREFMEQTEATEKARLSTRRPKLKWLFEARKKWETKGNM* # ORIGINAL: g7387.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 7854 9989 . + . ID=g7387;Name=g7387.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 7854 9989 . + . ID=g7387.t1;Parent=g7387;Name=g7387.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 7854 9989 . + . ID=g7387.t1.exon1;Parent=g7387.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 7854 9989 . + 0 ID=cds.g7387.t1;Parent=g7387.t1 #PROT g7387.t1 g7387 MAHEVKRQKISETLHVATRIADDAAPAETPGFGMSSEEDVGITEYISDHAGFFGVLKQRYTDFLVNEIDLTGNVVHLTDLTVSRPAPAPEPEENKVGGDGEDAAEQEDALVVTLGESAAREIRELAASHERERVVLVPFTGDKGARTKAHEAIRRCCPNLSSDTVDGATPEQKSVRVRLNRDSQGNRRDRRGGNNRPKGPDYTAFVLYKENRDTMSAISLLATLLKGNNKQFSYAGTKDRRGVTAQNVAVFRITPERLGGLNKTLMGIRLGNFRPVSVPLRLGELRGNRFVITIRNVTCDAETANSACASLSQRGFINYYGLQRFGTTSIPTHAIGSALLRGQYERAVDLILAPRENDTPELSRARKLWTEKRDPAAALAMLPRQFDIERRLLHSLDANGKTDYLGAIRIGIPRNLRLMYVHSYQSHVWNLMASERIRRYGIGGAVCGDVVVAQPGDSIEESAQEDLPEGHAAADVPATADAPAESTDAADGAAAVASEDRTRSTAAKVRVLTAEDAASGRYSIHDVLLPLPGYDVIYPAHEIGEMYHVRMRHDEIDLSEAGRSRLREFALSGGYRPLVARPADFVWRLIRYSDPNETLAKTDLDRLKERTSGTSSAGDRMETDSVASTAQLADASKPYVALQFEMSLPSSTYATMAIRELLKSSTVTRHHAQRNAMGPSQPQSTENEVVVADSTSAAVAVVTADGAEPMN* # ORIGINAL: g7386.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 6147 7451 . - . ID=g7386;Name=g7386.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 6147 7451 . - . ID=g7386.t1;Parent=g7386;Name=g7386.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 7280 7451 . - . ID=g7386.t1.exon1;Parent=g7386.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 7280 7451 . - 0 ID=cds.g7386.t1;Parent=g7386.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 6147 7015 . - . ID=g7386.t1.exon2;Parent=g7386.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 6147 7015 . - 2 ID=cds.g7386.t1;Parent=g7386.t1 #PROT g7386.t1 g7386 MSALRLAASLRCVARRRLQGHVVSGAPAALGMLVGSPMGAQWQHPPHVASYAAPLGTAKTAQKGKGAATKSARELLADFDALMKKRAPISEAERARRLRRRAIVDTIRRNRHYGSPMTQGLLLELLDMCDIPEHLTVCFNAIKLFRTFPTSANMDRRGMASLQTSFAKACVKLNLANELPNFLKEGKIIGLLPDGKTFTGVLRIVGDAGDAETFAQLETLAEEEGLELHPCAHLQARLALAAAEHAAGKTKDVTEVVGRVTLELGSAVERLLKGPAPKSVVGAAVAAAETLARLGAVDSVKEIDKFVPSLGDGARRVIQRAVDEALAAAKNGDADVTPATATVASV* # PASA_UPDATE: g7384.t1, single gene model update, valid-1, status:[pasa:asmbl_8462,status:12], valid-1 NODE_608_length_20280_cov_41.6627 . gene 97 1207 . - . ID=g7384;Name=g7384.t1 NODE_608_length_20280_cov_41.6627 . mRNA 97 1207 . - . ID=g7384.t1;Parent=g7384;Name=g7384.t1 NODE_608_length_20280_cov_41.6627 . five_prime_UTR 1174 1207 . - . ID=g7384.t1.utr5p1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . exon 1137 1207 . - . ID=g7384.t1.exon1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . CDS 1137 1173 . - 0 ID=cds.g7384.t1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . exon 752 847 . - . ID=g7384.t1.exon2;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . CDS 752 847 . - 2 ID=cds.g7384.t1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . exon 611 638 . - . ID=g7384.t1.exon3;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . CDS 611 638 . - 2 ID=cds.g7384.t1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . exon 327 399 . - . ID=g7384.t1.exon4;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . CDS 327 399 . - 1 ID=cds.g7384.t1;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . exon 97 114 . - . ID=g7384.t1.exon5;Parent=g7384.t1 NODE_608_length_20280_cov_41.6627 . CDS 97 114 . - 0 ID=cds.g7384.t1;Parent=g7384.t1;3_prime_partial=true #PROT g7384.t1 g7384 MTDVNPSHLLPLELIDKCIGSRIHVIMKSEKEIVGTLLGFDDFVNMVMEDVTEFEMTAEGRKVTKLEQILLNGNNVCMLIPGGE # ORIGINAL: g7389.t1 original gene structure, not modified by PASA NODE_608_length_20280_cov_41.6627 AUGUSTUS gene 13533 16349 . - . ID=g7389;Name=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS mRNA 13533 16349 . - . ID=g7389.t1;Parent=g7389;Name=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 16328 16349 . - . ID=g7389.t1.exon1;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 16328 16349 . - 0 ID=cds.g7389.t1;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 15860 16192 . - . ID=g7389.t1.exon2;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 15860 16192 . - 2 ID=cds.g7389.t1;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 15501 15532 . - . ID=g7389.t1.exon3;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 15501 15532 . - 2 ID=cds.g7389.t1;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 14483 15382 . - . ID=g7389.t1.exon4;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 14483 15382 . - 0 ID=cds.g7389.t1;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS exon 13533 14156 . - . ID=g7389.t1.exon5;Parent=g7389.t1 NODE_608_length_20280_cov_41.6627 AUGUSTUS CDS 13533 14156 . - 0 ID=cds.g7389.t1;Parent=g7389.t1 #PROT g7389.t1 g7389 MSTLGVAAVLRALAWHPLQFRGWGGRAIVTGVNQHRPRQHSHSLVRAFTEGRPQDDARKQSSKSVGGLGGRSRATGKHESSRGIPAHLQRQPVRQAAADDPQIVLKKNSQLRKVLEATALRKRSSNSTRSHIERFADLKLDGELINRLYRLGFEVPTDVQKDALPRIFAGESVHIHACTGSGKTLAYLLPVIAWSRSSLRQKAGSVLILTPTRELATQIAALAAHLSGYPNLVMAMLPGVPIDQQVAAYRVLAPPIVVATPRAFNEAVAHDPMLFGRANPPRLVVVDEADAVLKPLSSAEATPKKIEVRDKHPTAGAVALQQALGIEPFTQMGDVYDPHQSSREDALADIDAADDAVLLQRRTNLPQLVLVSATVTRALKIIAARLTGALIHTVSVGALLPPAKVEHCVALCDNTLDAKIAKLVALVQQDPLVPALVFVADSARVSEFVERLRDRNLKAYALHEETASRGIDKRLELSNMLVSHEKKEKSASVKKGSESTANESGVNPKAKRPLVFVATEATSRGLDFPGLERVFLMEPSRNAHAYVHVSGRVGRVGNKQATDHAATPPTQDGKDASAAAGGDMFLLEKPGFSEGKVITLASRGELRFVDNVGRELGILFKEVTIPSTASSPPKPK* # PASA_UPDATE: g13890.t1, single gene model update, valid-1, status:[pasa:asmbl_2263,status:3], valid-1 NODE_165_length_33848_cov_41.8875 . gene 2483 5036 . - . ID=g13890;Name=g13890.t1 NODE_165_length_33848_cov_41.8875 . mRNA 2483 5036 . - . ID=g13890.t1;Parent=g13890;Name=g13890.t1 NODE_165_length_33848_cov_41.8875 . five_prime_UTR 4985 5036 . - . ID=g13890.t1.utr5p1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 4735 5036 . - . ID=g13890.t1.exon1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 4735 4984 . - 0 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 4579 4630 . - . ID=g13890.t1.exon2;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 4579 4630 . - 2 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 4439 4448 . - . ID=g13890.t1.exon3;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 4439 4448 . - 1 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 4073 4319 . - . ID=g13890.t1.exon4;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 4073 4319 . - 0 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 3471 3913 . - . ID=g13890.t1.exon5;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 3471 3913 . - 2 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 2935 3258 . - . ID=g13890.t1.exon6;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 2935 3258 . - 0 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . exon 2483 2761 . - . ID=g13890.t1.exon7;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . CDS 2693 2761 . - 0 ID=cds.g13890.t1;Parent=g13890.t1 NODE_165_length_33848_cov_41.8875 . three_prime_UTR 2483 2692 . - . ID=g13890.t1.utr3p1;Parent=g13890.t1 #PROT g13890.t1 g13890 MAQATAPRILLALALLGSAIAVPIVHTESVGDAAADEITSLPGLSGTLPFHQYAGYVNVDEKNGRNLFYWFTEAETNPSTAPLVLWLNGGPGCSSISGFFTENGPFLVQSDGATLQLNDHAWNKVANVLWLESPAGVGFSYSDTKSDYNTNDLLTAQDSYRFLQNWLEKFPQYRESPFYITGESYAGHYIPNLSKQILDGNANGTEKKINLRGFAAGNALTNEPDDFNAPMTFFYTHALISPQDYKAAFDACKGDFTSSDSTCVNLVAAATQTVGNIDSYGIYEDICTNGQVRSHTQASMLHARYFASKRQSKNLREMPYTPPCIDNFVQTYINRADVKTAVHVKSSISWEQCTGNINYDFNHGSMLSLYPQFFEAGLNVLVYSGDTDGVLPTVGTEGWLARLPIKVTAPWRPWIGSDSQVAGYVTIYDKLTFLTIKGAGHMVPEFRPIHALDFLSRFLNGKPY* # PASA_UPDATE: g13892.t1, single gene model update, valid-1, status:[pasa:asmbl_2262,status:12], valid-1 NODE_165_length_33848_cov_41.8875 . gene 7554 16104 . - . ID=g13892;Name=g13892.t1 NODE_165_length_33848_cov_41.8875 . mRNA 7554 16104 . - . ID=g13892.t1;Parent=g13892;Name=g13892.t1 NODE_165_length_33848_cov_41.8875 . exon 13824 16104 . - . ID=g13892.t1.exon1;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . CDS 13824 16104 . - 0 ID=cds.g13892.t1;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . exon 13286 13628 . - . ID=g13892.t1.exon2;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . CDS 13286 13628 . - 2 ID=cds.g13892.t1;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . exon 7554 13148 . - . ID=g13892.t1.exon3;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . CDS 7793 13148 . - 1 ID=cds.g13892.t1;Parent=g13892.t1 NODE_165_length_33848_cov_41.8875 . three_prime_UTR 7554 7792 . - . ID=g13892.t1.utr3p1;Parent=g13892.t1 #PROT g13892.t1 g13892 MEATIARPPRRQKATKKSITKAASVQSRVSTTEAEDDCLAIDSEPSVVNTTHAEGDLGVQEPPIDTEATELDAPAVWAPSETSLKDSATALDNGEDHAVVNDVDACVNVTGNAAATAPPMSLFGDANEFVVPEEATQDSSMLQDATIEGVLTSCSSLYPMLESVECMEASLPGTVGMRLAPFSSADLSALYENPLLQTHGQLLDTFYDSWELQNKGGGSDLYVAIERYRDALSGIIASRAAVHSIDKSCDEAADSAWIMQRHEKVSDGVCRDNARVRHRIEYEFAVFRREGADELRRRLERLRKEVSERKVLCAFDAESAHAEADLIIDDFFFECSFADHLRNMPPGYVSLLEAPMRPQEYSRDVTRLRGYLDTLFHFERLPEPKPMALTHSVREWILKCATALISVACSDDHRFLLLHLLECPPGVGGWAAQLVQFSSGPWTNYTVDHFGAMLHILLRPVALGGGGERRSRASAQTSDSGAGRSAGGGDSVDESVRNGLARSASASLDDWVLVEETSRAPAGNSTGERRAPAHAPSEEDVCAILDQLPFGELLKFVLGIEHETGDGEGQHRTDGSAPAGLPTDTPRLPPAKLLVLIAFADYFCKELGSAFDRYPTGTHQTILRRIARLITQILCFVSARYADHRRLHLETGDNTSAGSSASAGTDTLLPGWDKSLAPTPQRLSVEFDALIERHARMFMRARGMSVWQFLADLPYDGVSDETLWRLFLLMFTGWCGIDFTIDRRFLQVETASEWMEGLTNDPSVRDRFHDALMTSVTSDVFFLLTTLGHICSALPSHSPAVPVIVAEIASVAYGALSPARELSMATARDVLCTIAMTHPHVISMLVVCVAEATTDSHRAAYVHLFDKHKGLPVERWRPSDDDLGHVKSLFAHPIESPGCKVARLILGRMDFGSIDTKTDGRTILPKAVHRRVALMIAERTANVPPPQRNIVGHVMSGRLLVEREFADFCWSVLMSLSLRTGATVTLAGDSALSPSHDSGRPPDVSDEECAFLARRSVSCPIAAFVALQICAFGQVYSVFRLSGIPMLRLLVDGDRVDAAFVILVDALPRMVLTNLLDLASDSGFVSLVSQLLHAEITLTGTPLRYIIRWIAPVASEQGEPTDLVYMFLAMVRAQIGGRLARAGEAYPSAVEWVEFWCRALTAASDWHTDTSYRRVLNALFRVAATVPPARTIIRRCLMAEHDRAFLSDADPSRNQGFVGALQSLFMGMPPPRSLATTPRPLLGKPITRVRDTYASCCDTARPWLVFECLVMETWRELDLRRQIGAASLRHPQASIDTVLKESGIKPPFPVEDFVIYRWADFAISLDHTSSVLVLVWQMFFAVYFAVAHSERSPGAPAFRERFLGPVFFGPHQLSFLDRIRNRLRDLANYYSGRAANPPSPGAVVSAVSGITDSAVSRARNGNGLLAAVSPPGADERPRSLSGSIQRDSQLGALFAAMRLWLSDSRLQAPGAHLEALGSVYELNRLVSVLAGDCLGHPEESLWWDLVDAEGVARSIRVSADMWMARRRGALVTPAGSKRPVTNATMLHSISLEVPKFGAPAFSLDTPSISIDDALLSGIRLPGYVIESLSEDLEVLRQAAEEHAGASARLCALDADYCDMICSLYRNVPEDLRLDIPCDQRRANRVCAGPARLVFRFQQRAMDQSVASAIAENRRLYKKAIQADPRVSAPVCAAILRMRRTVRALVLTGGAQGAALRQSIRGMAVYLFYYLLNAAEDSTFPPALVLFHTTIREVGARYVATDAGESGMLLKTLIGRPDRLPLAVDYFDPSLSPGLADLYGRVKTCLSRPSHGPHFVASLLHKFDMARWCDRNPPLGERREFLSTLVRELCKYGVTPAPDVEDVVACEAAMLRTVLARNFAELYLDALACFLSECVEGRLPASCWWDFLGLFLPFDCLPQQRPLPPSSPPAAHLPDTSPGKDTVAAAHRASVVLQRVDCLSLADVNDAVSLLADFFSTRRRTAGTLFAQWVPYVPMLRRLFGYLASRLVDTLSAAPRSDVTGACEAFEAVWTQVRSLYSPWLSSESRNQPAWTLDVTASNPSALHEMVSSFAAIIPLMHRAAPSANLASDALLDYYVVALAPNAPDYVLAVIHDTLLECVPWGAFFASPKMVRQLLRAADGAACVSLVFLSSFIPLLDWERSLSIPLESPFYRELLRLLLVLASEPRVVCRDQYIAFLERAHSFVWATLTPDDYQAVLASGVVRGKGVAAFQERSPLSSGLRLLRAAADISSHGRWVSAEHFRASVAKLRCFVRYAVEMITPATNLSGLQYTAAMREMLGYAGGIVVAPSLVAGLSPDAGAEAVRPVLQDIFQLFNRCEGGELAVGTFCTATIDYVALSAPGELMCPLLVSAGAIASVKRMSVVFEACISRFYECEMDAAALAAYGATSGQAGWEPIMRSLAAPELTYDEFLSQSVLQGCALTLHAHALQLLAACDAKEGASCAAGLWNVEIDISRWIVKMRPTEGPRDCAYVLLVCRYILLLVRLSALVDSGRDHARDAQRRMMELCQALARLGEDKDSGGVLGAIGLGAKSPYSLPFRLACRALAAFIASRTGGMDGGGGDTPAQLRARLREVEQFVQGLTSLSKKSAYSERFAAEIAALTDIVVRSGGGLLDGPLFVAELVRRLFPRQRFMQCLVTVY* # ORIGINAL: g13891.t1 original gene structure, not modified by PASA NODE_165_length_33848_cov_41.8875 AUGUSTUS gene 5682 7244 . - . ID=g13891;Name=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS mRNA 5682 7244 . - . ID=g13891.t1;Parent=g13891;Name=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 7131 7244 . - . ID=g13891.t1.exon1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 7131 7244 . - 0 ID=cds.g13891.t1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 6860 6989 . - . ID=g13891.t1.exon2;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 6860 6989 . - 0 ID=cds.g13891.t1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 6682 6759 . - . ID=g13891.t1.exon3;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 6682 6759 . - 2 ID=cds.g13891.t1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 6200 6408 . - . ID=g13891.t1.exon4;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 6200 6408 . - 2 ID=cds.g13891.t1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 5865 6018 . - . ID=g13891.t1.exon5;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 5865 6018 . - 0 ID=cds.g13891.t1;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 5682 5698 . - . ID=g13891.t1.exon6;Parent=g13891.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 5682 5698 . - 2 ID=cds.g13891.t1;Parent=g13891.t1 #PROT g13891.t1 g13891 MAMRGGRGGFGRGRGTPLGPPGSLGPLPAQTQAPNTYPTVENLPPIKPLTEAEEYLVKKSDEIRRAMRESPFYLQYKVQQKDVERYADRYKPVDRRICERRLADSEVDFIVFPMELKVKRLRSTGTRKGPLVAVPRVPPRRVKRVRIEDAPVTVDDLDELDRKPVDNDNDDEKEAGEEEKEGGGDDEDGEKNEDEYYDEEDMEEGTDYNTNYFDDGGDYGFDDDGGDDEGPSF* # ORIGINAL: g13895.t1 original gene structure, not modified by PASA NODE_165_length_33848_cov_41.8875 AUGUSTUS gene 25484 26305 . + . ID=g13895;Name=g13895.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS mRNA 25484 26305 . + . ID=g13895.t1;Parent=g13895;Name=g13895.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 25484 26305 . + . ID=g13895.t1.exon1;Parent=g13895.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 25484 26305 . + 0 ID=cds.g13895.t1;Parent=g13895.t1 #PROT g13895.t1 g13895 MYNGVNSKIAKIRNDIDLQYTVLVTTYKRNELLKEIVSHYCNLPSLLRIVVVWNNVGENVPAEDFIPCRVRIVYRTQAMNLISNRYRPENLAADSPDPVFMVDDDLIISLDAVEFAFKIWRAHREQIVGFVPRAVVRTTSGEYEYGGQPVVNSGHAFHFVLPNSCFIHKKHFEAYWRAPAEMIHQVDAMLNCDDLAMNFVVSAETLLPPLWVNAPYSRRSTSGQFQENPMHFVERSKCINDFIRFYGRNPLVPGDFVFLPVGKVFNQVMPHVN* # ORIGINAL: g13894.t1 original gene structure, not modified by PASA NODE_165_length_33848_cov_41.8875 AUGUSTUS gene 23942 25444 . + . ID=g13894;Name=g13894.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS mRNA 23942 25444 . + . ID=g13894.t1;Parent=g13894;Name=g13894.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 23942 25444 . + . ID=g13894.t1.exon1;Parent=g13894.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 23942 25444 . + 0 ID=cds.g13894.t1;Parent=g13894.t1 #PROT g13894.t1 g13894 MLQQTHHTPAYKTAGALVFVLWAGFSVYLWIGDEKSNCHEQAWVSASSEGASVTAEPAPDWQDVISLDATGVGIFIYPLPDEFQTDLLQSSRRHHPTATCACCSNSYGADVAFHLNLKQSPFVTTDPELADFFFIPAYLSCVLEQNASESGVFEDIPDLKRTSSFLNRVLDHIRNAYPYWNRRGGEDHIWAFSQEFGAHLFGDISKIRRSVFLVTNGQYSETVFQPWKDIVIPSLQRKDAIFIEPRVTSEPRKSGRRTLLFWRGHVTTEISIGKELRQSVALFVHNSLSNHSDVRVEIIRGKLADNEQSVAPLRDAVFCLCLEGRWAATSCPYYALFAGCIPVLVSEDIEYPFERFIDWRNFSVKVSPQRVGNIVPILRQIPKEAVTAMQVGMQRVWQSFHFPSTYAPGHATDLIVRELALKRGMMRVRKGVDRRREYEEEWGLDGLELTSEDMPEVVLQRGTYWKEQSASDDIVEQVSIRLPLVAYAKGWTESASETYM* # ORIGINAL: g13896.t1 original gene structure, not modified by PASA NODE_165_length_33848_cov_41.8875 AUGUSTUS gene 26480 32845 . - . ID=g13896;Name=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS mRNA 26480 32845 . - . ID=g13896.t1;Parent=g13896;Name=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 32774 32845 . - . ID=g13896.t1.exon1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 32774 32845 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 32115 32324 . - . ID=g13896.t1.exon2;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 32115 32324 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 31921 31997 . - . ID=g13896.t1.exon3;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 31921 31997 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 31536 31632 . - . ID=g13896.t1.exon4;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 31536 31632 . - 1 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 31350 31433 . - . ID=g13896.t1.exon5;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 31350 31433 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 31040 31106 . - . ID=g13896.t1.exon6;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 31040 31106 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 30476 30726 . - . ID=g13896.t1.exon7;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 30476 30726 . - 2 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 30113 30256 . - . ID=g13896.t1.exon8;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 30113 30256 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 29598 29999 . - . ID=g13896.t1.exon9;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 29598 29999 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 29164 29271 . - . ID=g13896.t1.exon10;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 29164 29271 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 28883 28977 . - . ID=g13896.t1.exon11;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 28883 28977 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 28593 28656 . - . ID=g13896.t1.exon12;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 28593 28656 . - 1 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 28196 28356 . - . ID=g13896.t1.exon13;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 28196 28356 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 27837 27999 . - . ID=g13896.t1.exon14;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 27837 27999 . - 1 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 27468 27516 . - . ID=g13896.t1.exon15;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 27468 27516 . - 0 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 27156 27293 . - . ID=g13896.t1.exon16;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 27156 27293 . - 2 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 26684 27041 . - . ID=g13896.t1.exon17;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 26684 27041 . - 2 ID=cds.g13896.t1;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 26480 26561 . - . ID=g13896.t1.exon18;Parent=g13896.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 26480 26561 . - 1 ID=cds.g13896.t1;Parent=g13896.t1 #PROT g13896.t1 g13896 MHAVVRGILAELLQHAVVQVASTEKSTRVSETSAEADDAGSGGFRSRGLSFLSRKGSRRTSKDGEATLLKEAAAQGGSNVSPTMARRASWQKRKSHTDLDVRVRKVSGSQIPPSADIPEGGTHGYPEDREEIDAFNPDAHDAHIKRWGSMNLIEQGSLAAELHKPATSLSTSPTQGMANEVVSAVAHRADLHGANIKRTRSIGSLGRFFGGKHKEKEKEKEKDGKDSKDGKEPMKDSKDSKDAHAKREDSTGDVPRKKNRSTLEEKLAVVALRLSSAEQSDNPGYRAAEHRWTDWFSPEAISALSKNAVMLHECIWEVYSSEATFYDHLGVLQSIFLGSLRDIQSEDGLLDIDADAIFGNIGAIRETSGKFLSLLEPVALPYATVVAAEELSTERRRTLSDPPQKAKDTRDVRTDDVAGLSKSAHAGHTHGLHPNAHGHSKGISRTPSGSRDTDKPIGLYTLASAFKGFADRFEPYFQYGINYKQGGVYLKSLEDRADFQTWLKWCESHPACKRLKLTDLLVEPMQRVTRYPLLLKTVLGNVAEGSPGRPVIAKAVEITEQFASRLNSMVWHRDNEAKLFEIQQLIDWQSVIDESPIDYVPSVECNDVMCELVILARSDRRFLLEGKLSRVVGGGTNVVDLHAYLLSDMLLLTKLKKKRMVLVRRPLAMTSLRAWDIAEDAAESADAKRAWLRHLAPIMISPLVPSVSLSASFNNSDSKLGDALHTLSTLAGPPASPLPVAQLSSSTSSVFNGVVSLFVASGDFMVRVNHSPAPAQTSSQPQPGLLHSGSTGSAGLQQSAPRSFSLHIAPLTRMTDVLEMACDHEGLDPTGYTLVRADDGPPVDLSRVIDDAAVWDVRLVHQNTGWGRTSSRG* # ORIGINAL: g13889.t1 original gene structure, not modified by PASA NODE_165_length_33848_cov_41.8875 AUGUSTUS gene 163 1948 . - . ID=g13889;Name=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS mRNA 163 1948 . - . ID=g13889.t1;Parent=g13889;Name=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 1780 1948 . - . ID=g13889.t1.exon1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 1780 1948 . - 0 ID=cds.g13889.t1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 1520 1654 . - . ID=g13889.t1.exon2;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 1520 1654 . - 2 ID=cds.g13889.t1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 1305 1393 . - . ID=g13889.t1.exon3;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 1305 1393 . - 2 ID=cds.g13889.t1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 807 1038 . - . ID=g13889.t1.exon4;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 807 1038 . - 0 ID=cds.g13889.t1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 441 533 . - . ID=g13889.t1.exon5;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 441 533 . - 2 ID=cds.g13889.t1;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS exon 163 263 . - . ID=g13889.t1.exon6;Parent=g13889.t1 NODE_165_length_33848_cov_41.8875 AUGUSTUS CDS 163 263 . - 2 ID=cds.g13889.t1;Parent=g13889.t1 #PROT g13889.t1 g13889 MEVTPADASATARLPAVGRVSAVPGSMNVSLHPLVIINISDHFTRMRMQSRNEHATAVGAILGVQSGRNVEIFNSYELLVKASDNGSAVVDHVYFLAKQEQFRKVFPAYDFLGWYSVGATPGPLEMHLHAQIAELSESPLFLQLDAYSKAGTSDLPIAVYESMLEVATDHVQIVLTPLTYKIETGEAERISVDHVAKIGTEGTGHKSAVTTHLTGQYNAIAMLHARVKIIHEYLAKVQRGELQANPAILRSVASLTARLPALDTPQLRHEYIC # PASA_UPDATE: g13893.t1, single gene model update, valid-1, status:[pasa:asmbl_2264,status:12], valid-1 NODE_165_length_33848_cov_41.8875 . gene 16989 22961 . + . ID=g13893;Name=g13893.t1 NODE_165_length_33848_cov_41.8875 . mRNA 16989 22961 . + . ID=g13893.t1;Parent=g13893;Name=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 16989 17394 . + . ID=g13893.t1.exon1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 16989 17394 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 17650 17855 . + . ID=g13893.t1.exon2;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 17650 17855 . + 2 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 18088 18259 . + . ID=g13893.t1.exon3;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 18088 18259 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 18549 18613 . + . ID=g13893.t1.exon4;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 18549 18613 . + 2 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 18799 18976 . + . ID=g13893.t1.exon5;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 18799 18976 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 19126 19181 . + . ID=g13893.t1.exon6;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 19126 19181 . + 2 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 19295 19392 . + . ID=g13893.t1.exon7;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 19295 19392 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 19764 20247 . + . ID=g13893.t1.exon8;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 19764 20247 . + 1 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 20418 20582 . + . ID=g13893.t1.exon9;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 20418 20582 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 20732 21215 . + . ID=g13893.t1.exon10;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 20732 21215 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 21356 21459 . + . ID=g13893.t1.exon11;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 21356 21459 . + 2 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 21705 21948 . + . ID=g13893.t1.exon12;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 21705 21948 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 22088 22137 . + . ID=g13893.t1.exon13;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 22088 22137 . + 2 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 22392 22534 . + . ID=g13893.t1.exon14;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 22392 22534 . + 0 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . exon 22673 22961 . + . ID=g13893.t1.exon15;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . CDS 22673 22877 . + 1 ID=cds.g13893.t1;Parent=g13893.t1 NODE_165_length_33848_cov_41.8875 . three_prime_UTR 22878 22961 . + . ID=g13893.t1.utr3p1;Parent=g13893.t1 #PROT g13893.t1 g13893 MVRPVRSAEEDMDEACVQDDASQTSRRKSTASNYETPSDSIMPDPSAGSGSISMSNGTAPVAASSSPQPAQPTWSQLHMTLKELKAQQHSLLNTVLTNFMFSADSSRVFFLGVPKGSRENTLLCVDLPESRGNKRDVVTSPWRTVCSSVVQAGTDALSKEEQLLRERKRVSAFGITSYEMDQRTGNVLFPAWGSLYLCSVTDPRLSTPVVPRILPTALRAARMDPKFCPTNPSLVSFVSYGDIYVMDMRSGFEKRLTFTHDDNNPADIILNPRSAGIAEYVMQEEFGRYTGNWWRPVNSSGPGESPHACILYVEIDEEMVDVHHIVDHSMPSRPDKLRYPRAGTPNARWTLKLAQFSHDLQGPTTIRTLGHIISMRFPWAEYLVRCGWTPEGDSVWAQLLDRQQQHLVLVTIPLFAFAYESESGPADRTNNRHGSIPREDSTGSMGVPGSHGPGGYFVRVHQYHGASSQLLQSPQRPHAHSHPHGHTGQIHGLGGGDGHPQSPVYNPGAPLYAPNIHGGPGDLNDAEQQNQQHTTASIAASIDVLVEEQSRIWINVHDALHFFPSRPGTRVLLWASEETGYRHLYLVHVTRSNDGSVRFAKVPITAGEWQVEPSQVWVDEARCLVYFVATKDSPLELHLYVASFASAIYDGSAVQSNAFGMEYPPLPGKRSSLGADVNGDERHRPSAGANIRRLTCAGFSHSVTMNKECTRFVSTFSSVAFPPTTAVYSLEWESALNGWALPHACHRVDLLRPMPSPFYRAPEMFSFVNREGVTLYGSIYKPPSAVWAPEQKHPTLLFVYGGPSVQMVTNEYKAVPHMRLLLLASLGYVVVLVDGRGSVRRGLAFEGHIKGVMGQVEVADQVEALEHVMQFHKCIDPQRIAIHGWSYGGYLALMGLAQRPDVFKLSIAGAPVTTWEMYDTAYTERYLGLPEDNPQGYQKGSVLNYIARFPDSDDRLLLIHGLIDENVHFSNTCILIDALVKSCKPYRLQVYPLERHGIRHFVASEHYETALLSFLQKYL* # ORIGINAL: g9242.t1 original gene structure, not modified by PASA NODE_1340_length_11902_cov_45.619 AUGUSTUS gene 2082 3066 . - . ID=g9242;Name=g9242.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS mRNA 2082 3066 . - . ID=g9242.t1;Parent=g9242;Name=g9242.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 2419 3066 . - . ID=g9242.t1.exon1;Parent=g9242.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 2419 3066 . - 0 ID=cds.g9242.t1;Parent=g9242.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 2082 2228 . - . ID=g9242.t1.exon2;Parent=g9242.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 2082 2228 . - 0 ID=cds.g9242.t1;Parent=g9242.t1 #PROT g9242.t1 g9242 MQSAGVALPGGSAGTAGGLPGRSDWHARELVIAGGDAAGLNSVQNRRDSKSSTEGNNADPVELRSTDAPLDVVIMVLSAPENIARREAIRDTWVRLGNPNSVYTFFLVGGLALDDNVLSALEDEAQTKKDVVIVYGLYDDYSRLTEKILAGFVHVTGMERPFRYLLKVDDNSWVRPDKILQAITEHAVRVDRDTRLYIGYMDGRATPKSTGKWAEKHLSDSREFLMRYLNEDVSVGAWLAGLDVSRIHDARFDTQHKSRGCNNA* # ORIGINAL: g9243.t1 original gene structure, not modified by PASA NODE_1340_length_11902_cov_45.619 AUGUSTUS gene 4265 4769 . - . ID=g9243;Name=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS mRNA 4265 4769 . - . ID=g9243.t1;Parent=g9243;Name=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 4693 4769 . - . ID=g9243.t1.exon1;Parent=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 4693 4769 . - 0 ID=cds.g9243.t1;Parent=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 4463 4583 . - . ID=g9243.t1.exon2;Parent=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 4463 4583 . - 1 ID=cds.g9243.t1;Parent=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 4265 4330 . - . ID=g9243.t1.exon3;Parent=g9243.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 4265 4330 . - 0 ID=cds.g9243.t1;Parent=g9243.t1 #PROT g9243.t1 g9243 MCYFRQSTLNKDTSGLEEVLAFTRKPHFYDIELPHYVTGGSGIFHLKGEADEWVAVRVKAGDLLTLSITMYNPMDIDPNTLAPVVVE* # ORIGINAL: g9244.t1 original gene structure, not modified by PASA NODE_1340_length_11902_cov_45.619 AUGUSTUS gene 6934 7341 . + . ID=g9244;Name=g9244.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS mRNA 6934 7341 . + . ID=g9244.t1;Parent=g9244;Name=g9244.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 6934 7341 . + . ID=g9244.t1.exon1;Parent=g9244.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 6934 7341 . + 0 ID=cds.g9244.t1;Parent=g9244.t1 #PROT g9244.t1 g9244 MASAEVCLPELLPTPAVIECKRQESFKADLKSNLFDAPHSVGEKEALAETEAPKSAVDTESKAVNDGGVAPVEDEPHAAASEPQAEDTVSPKRKREEETAATSGDTAQIAGGTADIAALEPAAKVPREADPTTDA* # ORIGINAL: g9245.t1 original gene structure, not modified by PASA NODE_1340_length_11902_cov_45.619 AUGUSTUS gene 7640 10673 . - . ID=g9245;Name=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS mRNA 7640 10673 . - . ID=g9245.t1;Parent=g9245;Name=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 10521 10673 . - . ID=g9245.t1.exon1;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 10521 10673 . - 0 ID=cds.g9245.t1;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 10264 10388 . - . ID=g9245.t1.exon2;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 10264 10388 . - 0 ID=cds.g9245.t1;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 8800 10126 . - . ID=g9245.t1.exon3;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 8800 10126 . - 1 ID=cds.g9245.t1;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 8204 8650 . - . ID=g9245.t1.exon4;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 8204 8650 . - 0 ID=cds.g9245.t1;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS exon 7640 8107 . - . ID=g9245.t1.exon5;Parent=g9245.t1 NODE_1340_length_11902_cov_45.619 AUGUSTUS CDS 7640 8107 . - 0 ID=cds.g9245.t1;Parent=g9245.t1 #PROT g9245.t1 g9245 MDEAAGADAGSGGARRVGQQRPKSAGNVLKGNTREAIDTYLADQRVSQIFEELLTRIIVERPHNALLFIETAIKDMINKEERKRVRSAHARMGSRGSLTDILELRRSEKKSEHVKNAISAATAATAATSDKKGGEDGDESNRPRSPTSLQSTSTASTTERKVSDDLSDRKKSFKSSLASLSMGSTGAPFKPQAPEAGGVVASVSTPAPWQGAGGAAAADAPPRPMPNKRLTIVKKGNRSRALSAPMPVAGPATDGTISEDRPWAMPIVAPKVRSGIVHTPVKEQFLAVRPKGRRTSENKLSLQPLYLSSSSGPQIPPPPPSVGFVGGLASGGSSAAAALVDSVGSKGGNVGGSARRKRRATCPEKISFSAAFADNTPKGIGMALDSFPLFKDCSLEVKRRLADSMGTRSYRYRDTIVRAGEMAKAMFFIMRGEVEVVSDDGEIVYAQLRSGNYFGEVGLLFSVPRTASVRAASNCIIMVLTKENFETILHDEPLVAAMVKREADRRMQAMKERAKNAQSLGGEFQVDAICQTIQDIPLFKFCEVGFMHQLASTIEPRLVQSGEYVVRKGDIGMEMFFVVRGTVEVVSEDGTSVITCLNSGSFFGEIGVLFKLPRTVSVRAQTACDLLVLLKDSLEKVVEGYPEISRQIKAEGESRLQRLRSAQEAGGDYGARMELEVTRENLKKVKLFNGWDENFLHLLSLHMHPRKFVAGARIFSAGDPVDFLCFIERGSIEAVSEDGEARLEFTTGQVVGELEFCAGIECTGNVSAVDETVALTIRRDKFENILADFPDIQAMLVHLKSNIEKAFESAEEEDGDAGDAGEPTGPLTMLNQSISEDQE* # PASA_UPDATE: g9241.t1, single gene model update, valid-1, status:[pasa:asmbl_1263,status:3], valid-1 NODE_1340_length_11902_cov_45.619 . gene 349 1704 . + . ID=g9241;Name=g9241.t1 NODE_1340_length_11902_cov_45.619 . mRNA 349 1704 . + . ID=g9241.t1;Parent=g9241;Name=g9241.t1 NODE_1340_length_11902_cov_45.619 . five_prime_UTR 349 418 . + . ID=g9241.t1.utr5p1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . exon 349 671 . + . ID=g9241.t1.exon1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . CDS 419 671 . + 0 ID=cds.g9241.t1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . exon 802 933 . + . ID=g9241.t1.exon2;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . CDS 802 933 . + 2 ID=cds.g9241.t1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . exon 1042 1306 . + . ID=g9241.t1.exon3;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . CDS 1042 1306 . + 2 ID=cds.g9241.t1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . exon 1447 1704 . + . ID=g9241.t1.exon4;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . CDS 1447 1546 . + 1 ID=cds.g9241.t1;Parent=g9241.t1 NODE_1340_length_11902_cov_45.619 . three_prime_UTR 1547 1704 . + . ID=g9241.t1.utr3p1;Parent=g9241.t1 #PROT g9241.t1 g9241 MAATAIAKFPYPADVRDECIYNLIPNTPPPKVKAPRHKSQYAEEARKEYRSHRGDAATMGPAKVPVEPPEEFLRSRAKEPKLPEPKKYAYPDADHRRPAVPKHSEKPLMGTVTNKNFIVTNAIDNILAAPKKPADDYFDYRTKKDYGKVPGYMTRRADNEKTAPAHGDDADASAQFKMMTEDERETILRGLKANWERVNQAYQTMSLSVDSIMKRARKERYEAMLKQLEQDIAKIEKHRFVVVKKGDEY* # ORIGINAL: g7864.t1 original gene structure, not modified by PASA NODE_2997_length_4570_cov_41.089 AUGUSTUS gene 2168 3007 . - . ID=g7864;Name=g7864.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS mRNA 2168 3007 . - . ID=g7864.t1;Parent=g7864;Name=g7864.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 2168 3007 . - . ID=g7864.t1.exon1;Parent=g7864.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 2168 3007 . - 0 ID=cds.g7864.t1;Parent=g7864.t1 #PROT g7864.t1 g7864 MRSCVLAVCVVAIATCAMLVVADADEGRRIPTARVLVTGFLPFMSYPVNPSGDVARNVSGTCERFALSAAQGGRRVDVCFEGWVLPVNTTGSSRVASALRSSSVDDDAFPYDAILHLGLEDSAKGLKIETMGVNQAADSVMSSRTATPACADNGNSGDVGGTAAVPGAACYLPTTADLGRLELEEAVAYAVDRSADSLGKALDAMILEAWSRDAGTYYCNETLFRTVEAIRSLRRRTRSGRLTPAMFVHLPNYDVMDEAQMARLVKALAAQLGAFSIGM* # ORIGINAL: g7863.t1 original gene structure, not modified by PASA NODE_2997_length_4570_cov_41.089 AUGUSTUS gene 113 1875 . + . ID=g7863;Name=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS mRNA 113 1875 . + . ID=g7863.t1;Parent=g7863;Name=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 113 239 . + . ID=g7863.t1.exon1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 113 239 . + 0 ID=cds.g7863.t1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 405 489 . + . ID=g7863.t1.exon2;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 405 489 . + 2 ID=cds.g7863.t1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 705 1056 . + . ID=g7863.t1.exon3;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 705 1056 . + 1 ID=cds.g7863.t1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 1173 1265 . + . ID=g7863.t1.exon4;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 1173 1265 . + 0 ID=cds.g7863.t1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 1487 1573 . + . ID=g7863.t1.exon5;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 1487 1573 . + 0 ID=cds.g7863.t1;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS exon 1786 1875 . + . ID=g7863.t1.exon6;Parent=g7863.t1 NODE_2997_length_4570_cov_41.089 AUGUSTUS CDS 1786 1875 . + 0 ID=cds.g7863.t1;Parent=g7863.t1 #PROT g7863.t1 g7863 TLGILEAMCRDNGYNFLRLDGSTPGNKRIPLVDRFNGRHMDDFVFLLSSKAGGVGLNLVGASRLILYDIDWNPANDVQAMARVWRDGQQRNVHIYRFLTTGTIEEKVFQRQVTKQALSGSVVDDRDGGADEAHGDGDARMPSSGGGASRLGGGPSTVQFTLEDLKDLFTLRKETACDTHELLGCTCLEVDDADVLDTEMDTEEFLPSVGAHIGTKSAHKRARNKATVKMDQLMGWEHHSLPLKQGALEESFLSDGNYGDAITFVFKNETAKGISAAT* # PASA_UPDATE: g7865.t1, single gene model update, valid-1, status:[pasa:asmbl_5363,status:12], valid-1 NODE_2997_length_4570_cov_41.089 . gene 3725 4194 . - . ID=g7865;Name=g7865.t1 NODE_2997_length_4570_cov_41.089 . mRNA 3725 4194 . - . ID=g7865.t1;Parent=g7865;Name=g7865.t1 NODE_2997_length_4570_cov_41.089 . exon 3725 4194 . - . ID=g7865.t1.exon1;Parent=g7865.t1 NODE_2997_length_4570_cov_41.089 . CDS 3775 4194 . - 0 ID=cds.g7865.t1;Parent=g7865.t1 NODE_2997_length_4570_cov_41.089 . three_prime_UTR 3725 3774 . - . ID=g7865.t1.utr3p1;Parent=g7865.t1 #PROT g7865.t1 g7865 MACRYIFKRLRFLGNKHASTAITLFFLAVWHGFHPGYFLTFAYELFCMEAERRVVNFFKPVFDNNGVPARLLSVAGFLLRTMILHYSLVSFELLSFGTSIAVYGSVFFSMHIVVLGAIAVDVALASTRSKPPRPPKKVD* # PASA_UPDATE: g11550.t1, single gene model update, valid-1, status:[pasa:asmbl_9799,status:12], valid-1 NODE_877_length_16346_cov_53.0049 . gene 9689 12332 . - . ID=g11550;Name=g11550.t1 NODE_877_length_16346_cov_53.0049 . mRNA 9689 12332 . - . ID=g11550.t1;Parent=g11550;Name=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 12033 12332 . - . ID=g11550.t1.exon1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 12033 12332 . - 0 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 11736 11863 . - . ID=g11550.t1.exon2;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 11736 11863 . - 0 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 11300 11457 . - . ID=g11550.t1.exon3;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 11300 11457 . - 1 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 11058 11167 . - . ID=g11550.t1.exon4;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 11058 11167 . - 2 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 10708 10828 . - . ID=g11550.t1.exon5;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 10708 10828 . - 0 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 10340 10451 . - . ID=g11550.t1.exon6;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 10340 10451 . - 2 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . exon 9689 10083 . - . ID=g11550.t1.exon7;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . CDS 9885 10083 . - 1 ID=cds.g11550.t1;Parent=g11550.t1 NODE_877_length_16346_cov_53.0049 . three_prime_UTR 9689 9884 . - . ID=g11550.t1.utr3p1;Parent=g11550.t1 #PROT g11550.t1 g11550 MLNTSSYAPSPKALSFGGGGGGVNTSVSGSAFSMNHSFNNASFGASGLHAATPSALAIESALEIPCSEPTLAVEWSPFKDTSDLIAFGGDSKITVGQVVVDNSDARRGPNLAFNHLVDLHHGTRLHALAWSPQSQLSPSVSLRLCAAGADFKVRLFDVAVQGESRAQVVALEGHTNYVNACTYSPSMEGTVLSTGDDRSCRMWDVRAQTETGSMQLSSPGMAVACHPSDPWKVMVAEKAGTVRFYDIRVLQPLFSMLTGAQPLMDADWCAADESQVGGIAGGMWQAWTLPYNGTQPDSGLAHAEGGRHFRWSRANPTLFATAGSGNGIKIHSTSRARVPAFGVQKGYVGGLSWHASLALCATGSDRCVRLWAADL* # PASA_UPDATE: g11547.t1, single gene model update, valid-1, status:[pasa:asmbl_9796,status:3], valid-1 NODE_877_length_16346_cov_53.0049 . gene 2281 3625 . + . ID=g11547;Name=g11547.t1 NODE_877_length_16346_cov_53.0049 . mRNA 2281 3625 . + . ID=g11547.t1;Parent=g11547;Name=g11547.t1 NODE_877_length_16346_cov_53.0049 . five_prime_UTR 2281 2601 . + . ID=g11547.t1.utr5p1;Parent=g11547.t1 NODE_877_length_16346_cov_53.0049 . exon 2281 2917 . + . ID=g11547.t1.exon1;Parent=g11547.t1 NODE_877_length_16346_cov_53.0049 . CDS 2602 2917 . + 0 ID=cds.g11547.t1;Parent=g11547.t1 NODE_877_length_16346_cov_53.0049 . exon 3023 3625 . + . ID=g11547.t1.exon2;Parent=g11547.t1 NODE_877_length_16346_cov_53.0049 . CDS 3023 3429 . + 2 ID=cds.g11547.t1;Parent=g11547.t1 NODE_877_length_16346_cov_53.0049 . three_prime_UTR 3430 3625 . + . ID=g11547.t1.utr3p1;Parent=g11547.t1 #PROT g11547.t1 g11547 MDCMTEMMVPALAFEDFSALLDFPTSDPSDVTLPVTPASALPLKQDPFLFGEDALDWNSLLGRGAALFDVSPASKPMKMRKPISPKRKASAPADGGIAKKRKYRRVSSLPSLEGIPMRHRQLPKSFFSEPKVNTTAAGLAMQARLCIAPVFEAIQDKPAAAPAFVGAVDAKLLNALFDCVEPKQQKVSVPILSKKFDFDNFDMDMFADECLVPSLEGLCGVPLMDPMDFNSILSELVCQI* # PASA_UPDATE: g11546.t1, single gene model update, valid-1, status:[pasa:asmbl_9795,status:12], valid-1 NODE_877_length_16346_cov_53.0049 . gene 394 1678 . + . ID=g11546;Name=g11546.t1 NODE_877_length_16346_cov_53.0049 . mRNA 394 1678 . + . ID=g11546.t1;Parent=g11546;Name=g11546.t1 NODE_877_length_16346_cov_53.0049 . five_prime_UTR 394 402 . + . ID=g11546.t1.utr5p1;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . exon 394 612 . + . ID=g11546.t1.exon1;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . CDS 403 612 . + 0 ID=cds.g11546.t1;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . exon 765 1001 . + . ID=g11546.t1.exon2;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . CDS 765 1001 . + 0 ID=cds.g11546.t1;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . exon 1330 1678 . + . ID=g11546.t1.exon3;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . CDS 1330 1437 . + 0 ID=cds.g11546.t1;Parent=g11546.t1 NODE_877_length_16346_cov_53.0049 . three_prime_UTR 1438 1678 . + . ID=g11546.t1.utr3p1;Parent=g11546.t1 #PROT g11546.t1 g11546 MPNGIVGASVSGGNSGGSSLAPISGGAGSGGGGGGGSNAGAIAAGVVVSLVVVAAIVGFAYYNHTHNGIVVSNIKRGWGKMTSAMKSSGTTVTTTKTTRTTTTKTVTESTTSLSEVKVVPNPVHGATPPTPRTNKPQVTHSYATARPPPVASSHPASANARAPQRPASPATATKAPNAHPKPYR* # ORIGINAL: g11548.t1 original gene structure, not modified by PASA NODE_877_length_16346_cov_53.0049 AUGUSTUS gene 4944 5626 . + . ID=g11548;Name=g11548.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS mRNA 4944 5626 . + . ID=g11548.t1;Parent=g11548;Name=g11548.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 4944 5066 . + . ID=g11548.t1.exon1;Parent=g11548.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 4944 5066 . + 0 ID=cds.g11548.t1;Parent=g11548.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 5501 5626 . + . ID=g11548.t1.exon2;Parent=g11548.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 5501 5626 . + 0 ID=cds.g11548.t1;Parent=g11548.t1 #PROT g11548.t1 g11548 MLASMLSRTAVRARAVALPKRGGHGGYAREHDDLVGAAPGHFIPFPTGSRTGLLVGGFVVFLVGIWLPIGLCQYQLAKKSSK* # ORIGINAL: g11549.t1 original gene structure, not modified by PASA NODE_877_length_16346_cov_53.0049 AUGUSTUS gene 7411 8980 . + . ID=g11549;Name=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS mRNA 7411 8980 . + . ID=g11549.t1;Parent=g11549;Name=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 7411 7585 . + . ID=g11549.t1.exon1;Parent=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 7411 7585 . + 0 ID=cds.g11549.t1;Parent=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 7907 8496 . + . ID=g11549.t1.exon2;Parent=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 7907 8496 . + 2 ID=cds.g11549.t1;Parent=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 8675 8980 . + . ID=g11549.t1.exon3;Parent=g11549.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 8675 8980 . + 0 ID=cds.g11549.t1;Parent=g11549.t1 #PROT g11549.t1 g11549 MAAPVVVVPAVAYQNSHAIYRAPNTPFVVKGRDLLAGDALNIVDIFDAAYDMHMELVIDLQNAPLLAAVNTLLAQVAAMAPIPGQVAAMALQAAAMAPIPGQVAAMALQVAAMAPQVAAMAPIPRQVARLSAQVAAMAPITRQVAAMAPQVAAMAPIPRQVAAMAPQVDAMAPLPGQVAGLSAQVAAMAPIPRQVAAMALQVAAMAPLPGQVAALSAQVAALPAALVSLQDTIRIRMLNHNLQVALAPLNILPVTRTAPGPLPPGLLGRHRPAQAALITFIAAPWVDRIGTYPGLLSARPPRVANSHCVFPDTKAAIAIMTEVEIVRLMVFYGDSMGIIDNDPLSTMRSKVVVFLC* # ORIGINAL: g11551.t1 original gene structure, not modified by PASA NODE_877_length_16346_cov_53.0049 AUGUSTUS gene 13518 14440 . + . ID=g11551;Name=g11551.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS mRNA 13518 14440 . + . ID=g11551.t1;Parent=g11551;Name=g11551.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 13518 13793 . + . ID=g11551.t1.exon1;Parent=g11551.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 13518 13793 . + 0 ID=cds.g11551.t1;Parent=g11551.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS exon 13952 14440 . + . ID=g11551.t1.exon2;Parent=g11551.t1 NODE_877_length_16346_cov_53.0049 AUGUSTUS CDS 13952 14440 . + 0 ID=cds.g11551.t1;Parent=g11551.t1 #PROT g11551.t1 g11551 MSGELKGKVAIVTGASSGIGRQTAVDFAKAGAKVVIVARNKEKLEELVAEIKKAGGEASLFVGDVSKEAVNKDAVAFTLAKYGHLDASFINAGIYRGRKSIPEVDDALIDEIFNTNCKGVLYGLKHQIPAMLATANGKGSIITNSSVAGYHNSASLAGGSVYAASKAWVNTITQMAAIENAGKIRVNAVLPGVVKTPILPMSEEEVDKFAAGINLMGRAGVSPEVSSLVTFLASDKASYITGSLYVVDGGFCLH* # PASA_UPDATE: g11552.t1, single gene model update, valid-1, status:[pasa:asmbl_9798,status:12], valid-1 NODE_877_length_16346_cov_53.0049 . gene 14796 16079 . + . ID=g11552;Name=g11552.t1 NODE_877_length_16346_cov_53.0049 . mRNA 14796 16079 . + . ID=g11552.t1;Parent=g11552;Name=g11552.t1 NODE_877_length_16346_cov_53.0049 . five_prime_UTR 14796 14824 . + . ID=g11552.t1.utr5p1;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . five_prime_UTR 14966 14974 . + . ID=g11552.t1.utr5p2;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . exon 14796 14824 . + . ID=g11552.t1.exon1;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . exon 14966 15032 . + . ID=g11552.t1.exon2;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . CDS 14975 15032 . + 0 ID=cds.g11552.t1;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . exon 15529 15656 . + . ID=g11552.t1.exon3;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . CDS 15529 15656 . + 2 ID=cds.g11552.t1;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . exon 15996 16079 . + . ID=g11552.t1.exon4;Parent=g11552.t1 NODE_877_length_16346_cov_53.0049 . CDS 15996 16079 . + 0 ID=cds.g11552.t1;Parent=g11552.t1 #PROT g11552.t1 g11552 MSRALFVVVVCSLVAAAFAGELCANPEVSAVQTYTSTDLASAREEGVFVSEFGLKCGGEDVKEAQLHAVVNGKVLSVAANEEGDKYQVR* # ORIGINAL: g2588.t1 original gene structure, not modified by PASA NODE_1670_length_9870_cov_70.3288_potentialcontaminant AUGUSTUS gene 573 2534 . - . ID=g2588;Name=g2588.t1 NODE_1670_length_9870_cov_70.3288_potentialcontaminant AUGUSTUS mRNA 573 2534 . - . ID=g2588.t1;Parent=g2588;Name=g2588.t1 NODE_1670_length_9870_cov_70.3288_potentialcontaminant AUGUSTUS exon 573 2534 . - . ID=g2588.t1.exon1;Parent=g2588.t1 NODE_1670_length_9870_cov_70.3288_potentialcontaminant AUGUSTUS CDS 573 2534 . - 0 ID=cds.g2588.t1;Parent=g2588.t1 #PROT g2588.t1 g2588 MFIRVVIVVLVTCAHYVGVACGQSPTCPPGGFFWTDGATPATTKCKPCGRGTYSAEWNATVCIPCANAGKGCPYKGAISPSETAWTLLPNAGSYVGAFFTSDFEYVIQPPDRISESVPRVEDISKTTFSNSAGRFVLMAFVIGVGVILPILVWKGQNVLHAVDKFYEKPSRDIYVPVPSGCARCDVIYGSDCNEGSLSGEMRPSTDEQPPVSHNVIPRRTQSLARAVFTCAALLGAIATAAYVTQDFVANRYVEVRTLVPYRDLSVFPMAYTLRMPSFQFLFLGASLTAPGEVGPTFIDPVTLIISSDKGTGPIKEAECVLEHYGIYPCDRATQKWWVRFIDVLDYVAGDTLHVSGFERVYVRDEDVAACRTRGRSHCFLVYVDYTNTALVPDLNPGDGTELTFALRAARNAPVLVQAMRIRILVNSWRQDVHDATMMPAPEAGALTLDACDDVIYLAAFRCATSLVHLHAIYSVAVLRDPSLAFVSGGPDLQLVPRMSGESIGYSCADPVDATGTPFAIVSLALPLSIVQIQQVEHISVSAFLTSLVSLPASVLSIFGVGYALYLFAAKAHAEKWKSWTSRHNIFSSLRSLCGRCWRGCYGVVCRRWKKRQCRQSQTQSASHSVQDDTEASRRPLLQAGVGDTSTNHLSRAV* # PASA_UPDATE: g3758.t1, single gene model update, valid-1, status:[pasa:asmbl_7418,status:12], valid-1 NODE_4532_length_1491_cov_28.3249 . gene 187 1412 . + . ID=g3758;Name=g3758.t1 NODE_4532_length_1491_cov_28.3249 . mRNA 187 1412 . + . ID=g3758.t1;Parent=g3758;Name=g3758.t1 NODE_4532_length_1491_cov_28.3249 . five_prime_UTR 187 188 . + . ID=g3758.t1.utr5p1;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . exon 187 302 . + . ID=g3758.t1.exon1;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . CDS 189 302 . + 0 ID=cds.g3758.t1;Parent=g3758.t1;5_prime_partial=true NODE_4532_length_1491_cov_28.3249 . exon 500 620 . + . ID=g3758.t1.exon2;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . CDS 500 620 . + 0 ID=cds.g3758.t1;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . exon 837 968 . + . ID=g3758.t1.exon3;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . CDS 837 968 . + 2 ID=cds.g3758.t1;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . exon 1264 1412 . + . ID=g3758.t1.exon4;Parent=g3758.t1 NODE_4532_length_1491_cov_28.3249 . CDS 1264 1412 . + 2 ID=cds.g3758.t1;Parent=g3758.t1;3_prime_partial=true #PROT g3758.t1 g3758 PEYMLCLQNGKFDHADRLFHSVPETWSGVLSSPADVKELIPEFYAPPGDFLLNTEGLSLGVRQDKTVVNNVALPPWARDAHDFTSKLREALESDYVSESIHAWIDLIFGCKQRGDAAVKADNLFYYLTYEGAVNIDEITNPNERKAIEVQIEEFGQTPRQLFHDAHPRRLPK # PASA_UPDATE: g2212.t1, single gene model update, valid-1, status:[pasa:asmbl_5250,status:12], valid-1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . gene 2 4418 . + . ID=g2212;Name=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . mRNA 2 4418 . + . ID=g2212.t1;Parent=g2212;Name=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 2 77 . + . ID=g2212.t1.exon1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 2 77 . + 0 ID=cds.g2212.t1;Parent=g2212.t1;5_prime_partial=true NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 701 1045 . + . ID=g2212.t1.exon2;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 701 1045 . + 2 ID=cds.g2212.t1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 1304 1654 . + . ID=g2212.t1.exon3;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 1304 1654 . + 2 ID=cds.g2212.t1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 1858 1976 . + . ID=g2212.t1.exon4;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 1858 1976 . + 2 ID=cds.g2212.t1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 2468 2563 . + . ID=g2212.t1.exon5;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 2468 2563 . + 0 ID=cds.g2212.t1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 2762 3683 . + . ID=g2212.t1.exon6;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 2762 3683 . + 0 ID=cds.g2212.t1;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . exon 4122 4418 . + . ID=g2212.t1.exon7;Parent=g2212.t1 NODE_2928_length_4720_cov_32.214_potentialcontaminant . CDS 4122 4418 . + 2 ID=cds.g2212.t1;Parent=g2212.t1;3_prime_partial=true #PROT g2212.t1 g2212 FINVDITTTDSGSLTKLERFQIDIQNVNKAPILIEPKSFTVNENVPAGTPLFGLIGATNTSFLKATDPDAADKAVFELVSDAGGLFAMKTDASGRYYVAVAREGTLDFESLVKSFTIRIQATDDGKPPRAYTQEHTVTVLDVNEPPAQIALSSLQIAENSKPGVVVGRLSAFDPEGAASSLTYSIVSQKQKDTNGVDQNVNHLEIFNNGTWFVRSSATVALDYEANPNPILIVVQCRDTGVQYSNQYANQDFRITITDVNEAPSKLEIGPSPATVPENSLGDTLIGTFKTTDQDTFQNSYTFLIRSTDNGVPPLSIQSSFTVTIQDVNEPPTIDPTQQLSVKENSLAGDIVGVLVATDPDAAQTLEFSINSGGNGFFKVAADKKTLVVARAGLDFELVNSYKLSIYCTDSGANPRDALQDLIVRIDDVNEKPTSVSIDATSLPEVIGGPATTADVLIGRLSVADPDKSDNHVFSVVNRDAGQTQCDVFVILPGSFTLSVGIGKSLDYESFVTPICNLTITATDKGSLSASLDVRVTVRDVNERPTGIRPLFALTVKETLPIQQAIGGFIVDDPDRGQLHALSLTSATRVPVQIPSSNLLTVTTPLDFETMPSFNFTVTATDPGGLTVQVDMTLTVTDENEPPVKVNLALDRPLLEDVAVGSRVGTLSAEDPDAGDSHTFTLDDSAGGRFKLTGNAIYTDASLVGDGDTAITIVVTAMDKGTPSLQVSTSIQVTVI # ORIGINAL: g7255.t1 original gene structure, not modified by PASA NODE_3848_length_2632_cov_39.4235 AUGUSTUS gene 207 2160 . - . ID=g7255;Name=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS mRNA 207 2160 . - . ID=g7255.t1;Parent=g7255;Name=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 2111 2160 . - . ID=g7255.t1.exon1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 2111 2160 . - 0 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 1886 2006 . - . ID=g7255.t1.exon2;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 1886 2006 . - 1 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 1534 1659 . - . ID=g7255.t1.exon3;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 1534 1659 . - 0 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 1097 1249 . - . ID=g7255.t1.exon4;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 1097 1249 . - 0 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 890 975 . - . ID=g7255.t1.exon5;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 890 975 . - 0 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 545 668 . - . ID=g7255.t1.exon6;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 545 668 . - 1 ID=cds.g7255.t1;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS exon 207 290 . - . ID=g7255.t1.exon7;Parent=g7255.t1 NODE_3848_length_2632_cov_39.4235 AUGUSTUS CDS 207 290 . - 0 ID=cds.g7255.t1;Parent=g7255.t1 #PROT g7255.t1 g7255 MASCHVVQAATVAKQYGDALKNDINLQGVRPTLVGFLANSDPAARKYAEWTAKTCREAGISFELREVPRNDLEDKIVEANEDASVNGIIVYYPVFGGTQDQYIQNCVSVYKDVEGLQHTYCYNLYHNVRFLDLERRKKCILPCTPLAIVKILEHVQVYNPILTEGNRLHGRTITIVNRSEIVGRPLAAMLANDGARVYSIDITGVQYFHRGEGIKLRRHQVDDTSITLEEALSQSDVVITGVPVKDYK # PASA_UPDATE: g573.t1, single gene model update, valid-1, status:[pasa:asmbl_4500,status:12], valid-1 NODE_2525_length_6007_cov_37.5152 . gene 141 1446 . + . ID=g573;Name=g573.t1 NODE_2525_length_6007_cov_37.5152 . mRNA 141 1446 . + . ID=g573.t1;Parent=g573;Name=g573.t1 NODE_2525_length_6007_cov_37.5152 . exon 141 269 . + . ID=g573.t1.exon1;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . CDS 141 269 . + 0 ID=cds.g573.t1;Parent=g573.t1;5_prime_partial=true NODE_2525_length_6007_cov_37.5152 . exon 549 794 . + . ID=g573.t1.exon2;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . CDS 549 794 . + 0 ID=cds.g573.t1;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . exon 939 1043 . + . ID=g573.t1.exon3;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . CDS 939 1043 . + 0 ID=cds.g573.t1;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . exon 1181 1446 . + . ID=g573.t1.exon4;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . CDS 1181 1288 . + 0 ID=cds.g573.t1;Parent=g573.t1 NODE_2525_length_6007_cov_37.5152 . three_prime_UTR 1289 1446 . + . ID=g573.t1.utr3p1;Parent=g573.t1 #PROT g573.t1 g573 VDDFKSIKKFRIFNTNNLWAKLSAIKRVVEKKELRMEVIVNHKSLDDGTNIIQLETAAGSAMKHFDGAIGINVPRSRFLPVKSTSDLFLVKSNLYTYNKGTIAMNPKRIFEAVPLIKLGDEHFRKVGHFSRRFQSIPDILELDHLTVTGDVTFGKGVTLRGTVIIVANHGDRIDIPGGSVLENKIVSGNLRILDH* # PASA_UPDATE: g575.t1, single gene model update, valid-1, status:[pasa:asmbl_4501,status:12],[pasa:asmbl_4502,status:12], valid-1 NODE_2525_length_6007_cov_37.5152 . gene 3624 5911 . + . ID=g575;Name=g575.t1 NODE_2525_length_6007_cov_37.5152 . mRNA 3624 5911 . + . ID=g575.t1;Parent=g575;Name=g575.t1 NODE_2525_length_6007_cov_37.5152 . five_prime_UTR 3624 3683 . + . ID=g575.t1.utr5p1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 3624 3719 . + . ID=g575.t1.exon1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 3684 3719 . + 0 ID=cds.g575.t1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 3939 4055 . + . ID=g575.t1.exon2;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 3939 4055 . + 0 ID=cds.g575.t1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 4348 4476 . + . ID=g575.t1.exon3;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 4348 4476 . + 0 ID=cds.g575.t1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 4751 5193 . + . ID=g575.t1.exon4;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 4751 5193 . + 0 ID=cds.g575.t1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 5386 5617 . + . ID=g575.t1.exon5;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 5386 5617 . + 1 ID=cds.g575.t1;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . exon 5786 5911 . + . ID=g575.t1.exon6;Parent=g575.t1 NODE_2525_length_6007_cov_37.5152 . CDS 5786 5911 . + 0 ID=cds.g575.t1;Parent=g575.t1;3_prime_partial=true #PROT g575.t1 g575 MLTHQADLLLSRGKGEIALELARAIVDIDPTYTRAWIVLSKCYAAAGDFEMALVALNAAPMAVADDFAMPEIPPPIRKVNNDEAILQMLIEEQQGSELGVVPAAALRGTFVDAYAVLCTILRQCGWDKLLVHRSRVFVMDDEARPESRGGDGAAPTEPAPPSNAPGGQNGQNGQNGQNGQNGQNGQGTGMLQRGASRISVNTTASSHGGEGGDAADGGDGSDDRSVKDCDDALRTVSLTDVKTLSVAEPTTPRPAHAAAALTNGRLSVARTVSAGSAVSVNTADDPDASFRWAQIDSRPSTEKRLCEKWLDHLFIALYEDFKRYTIWQAHDDHFIRANKVPLRSSGDWIRLGQLAERLGHQ # ORIGINAL: g574.t1 original gene structure, not modified by PASA NODE_2525_length_6007_cov_37.5152 AUGUSTUS gene 1546 2202 . - . ID=g574;Name=g574.t1 NODE_2525_length_6007_cov_37.5152 AUGUSTUS mRNA 1546 2202 . - . ID=g574.t1;Parent=g574;Name=g574.t1 NODE_2525_length_6007_cov_37.5152 AUGUSTUS exon 1892 2202 . - . ID=g574.t1.exon1;Parent=g574.t1 NODE_2525_length_6007_cov_37.5152 AUGUSTUS CDS 1892 2202 . - 0 ID=cds.g574.t1;Parent=g574.t1 NODE_2525_length_6007_cov_37.5152 AUGUSTUS exon 1546 1675 . - . ID=g574.t1.exon2;Parent=g574.t1 NODE_2525_length_6007_cov_37.5152 AUGUSTUS CDS 1546 1675 . - 1 ID=cds.g574.t1;Parent=g574.t1 #PROT g574.t1 g574 MGDCGVASVMLAHSAYHFILNNDCVAFPQQMFILVDGNDVVGCVIAEEIECAHPVIVDDKGTYSPDVVVCSEEQRDAAMGVSRIWVSDSHRRKGIATLLLDAARENFRYGVSVAKHLVAFTQPTPAGRQLAESYMGTPAFLVYTHS* # ORIGINAL: g5748.t1 original gene structure, not modified by PASA NODE_2291_length_6841_cov_40.9687 AUGUSTUS gene 6351 6726 . + . ID=g5748;Name=g5748.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS mRNA 6351 6726 . + . ID=g5748.t1;Parent=g5748;Name=g5748.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 6351 6413 . + . ID=g5748.t1.exon1;Parent=g5748.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 6351 6413 . + 0 ID=cds.g5748.t1;Parent=g5748.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 6532 6726 . + . ID=g5748.t1.exon2;Parent=g5748.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 6532 6726 . + 0 ID=cds.g5748.t1;Parent=g5748.t1 #PROT g5748.t1 g5748 MEARPIKKLDEAVVNRIAAGEIIHRPANALKEMIENSLDAGSTSIQILVKNGGLKMLQIQDNGSGIRVGEHDRCPAACQKNAFKT* # PASA_UPDATE: g5746.t1, single gene model update, valid-1, status:[pasa:asmbl_3952,status:3], valid-1 NODE_2291_length_6841_cov_40.9687 . gene 102 1372 . - . ID=g5746;Name=g5746.t1 NODE_2291_length_6841_cov_40.9687 . mRNA 102 1372 . - . ID=g5746.t1;Parent=g5746;Name=g5746.t1 NODE_2291_length_6841_cov_40.9687 . five_prime_UTR 1211 1372 . - . ID=g5746.t1.utr5p1;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . exon 1041 1372 . - . ID=g5746.t1.exon1;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . CDS 1041 1210 . - 0 ID=cds.g5746.t1;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . exon 742 805 . - . ID=g5746.t1.exon2;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . CDS 742 805 . - 1 ID=cds.g5746.t1;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . exon 102 605 . - . ID=g5746.t1.exon3;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . CDS 456 605 . - 0 ID=cds.g5746.t1;Parent=g5746.t1 NODE_2291_length_6841_cov_40.9687 . three_prime_UTR 102 455 . - . ID=g5746.t1.utr3p1;Parent=g5746.t1 #PROT g5746.t1 g5746 MVVLRLARFGRRHLPFYRIFATNPRGKRDGKHIEVVGTYNPVVNQQNQKTLDLKVDRIKYWLSVGAQPTEVVGRLLAMAGLAPMPPAIVAKRVHKKVADGVWEQYREVVAKASPPPKKAEDVSNTQT* # ORIGINAL: g5747.t1 original gene structure, not modified by PASA NODE_2291_length_6841_cov_40.9687 AUGUSTUS gene 1736 5635 . + . ID=g5747;Name=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS mRNA 1736 5635 . + . ID=g5747.t1;Parent=g5747;Name=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 1736 2199 . + . ID=g5747.t1.exon1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 1736 2199 . + 0 ID=cds.g5747.t1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 2459 2592 . + . ID=g5747.t1.exon2;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 2459 2592 . + 1 ID=cds.g5747.t1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 2801 3882 . + . ID=g5747.t1.exon3;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 2801 3882 . + 2 ID=cds.g5747.t1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 4241 4357 . + . ID=g5747.t1.exon4;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 4241 4357 . + 0 ID=cds.g5747.t1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 4475 5185 . + . ID=g5747.t1.exon5;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 4475 5185 . + 0 ID=cds.g5747.t1;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS exon 5339 5635 . + . ID=g5747.t1.exon6;Parent=g5747.t1 NODE_2291_length_6841_cov_40.9687 AUGUSTUS CDS 5339 5635 . + 0 ID=cds.g5747.t1;Parent=g5747.t1 #PROT g5747.t1 g5747 MAVKKTAKSAKPAEEPVKATGDDAGAVEGAVGDDAMFKCKHVKQSVRLSNLRKKIPHADLTACADCVAASGVAKKDAKKKTSGKSSASKDAKSDGKGDAAVAVGEDALEEPPLLWVCLTCGDVSCGRSAKGHAVAHHSAKPAHCVVLCTETRQLWCYECNHELEADDDESLQDALKVLEKKIGTKASLKTGRETKADKSALTVSDPSDSKPTRVSGMPPGLSNLGNTCFFNSAVQNLSALRALTTVICGTPQHADAEWCPADPSTYSLVPTHRHGTLSFNANVCGGDLLDSVGHVWYTEGPGRLRLALAEFFGMFGVSSPASGVAEDASASASIGGGKRGTKAHVGSRASVSPQHLFGEVCKKAPRFRSFEQQDSHELLRYLLDGIRTEDTVRAQKSILTHFGIDAAVLRQRAVEKKERERKRLTGRLIEDEEDDDAAAVGEAHKEGKNGNAGEESADSDWENADPSKKAKQRDKEKEKEKATQSPPDAISLDVKDRLKRLKNALVTPVDAVFGGRLASTVTCSECLRQSQRVDPFFDLSVQIPADGPARGAKRTPVVVETNSAAASHFFSVKGGSSDAAPKVVAMSKHQLKKAAKVRKPKKKAVPPKAAVAGEGAGDATVESDPNDAVEATGDENESGDDAESGEETSENSSADALADNIASMTITEKEAAVGGAQDAVMTSVEGSDSHAPGTDNKEQAAEEALASREEEEAPAEEVTAGPRSFATGRLVKDEGDDGDDEEDDDGCTDKPTVSTEPVAPLPTTWPAYGGKDVPTLEQCLGEFFTPESLTGPNAYACETCKKKTSASREFIVAQPPTVLTVHLKRFAFSMTGVARKISRRVAFPVELDVSPFCSKSALTQPSQTGTSPSVADAIQYRLRGVVEHSGTMRGGHYVAHVRTGDGPTWAYASDTQVSAEAEQKALGAEAFLLFYERV* # PASA_UPDATE: g2878.t1, single gene model update, valid-1, status:[pasa:asmbl_7937,status:12], valid-1 NODE_5210_length_968_cov_33.8096_potentialcontaminant . gene 130 803 . + . ID=g2878;Name=g2878.t1 NODE_5210_length_968_cov_33.8096_potentialcontaminant . mRNA 130 803 . + . ID=g2878.t1;Parent=g2878;Name=g2878.t1 NODE_5210_length_968_cov_33.8096_potentialcontaminant . exon 130 324 . + . ID=g2878.t1.exon1;Parent=g2878.t1 NODE_5210_length_968_cov_33.8096_potentialcontaminant . CDS 130 324 . + 0 ID=cds.g2878.t1;Parent=g2878.t1;5_prime_partial=true NODE_5210_length_968_cov_33.8096_potentialcontaminant . exon 672 803 . + . ID=g2878.t1.exon2;Parent=g2878.t1 NODE_5210_length_968_cov_33.8096_potentialcontaminant . CDS 672 803 . + 0 ID=cds.g2878.t1;Parent=g2878.t1 #PROT g2878.t1 g2878 GSARAETGHFRDIFATYAEDAGFNKTQIDDLIYFPTQDMFDVLSSPSLDDLDAVFNARSQSDVRKAGIERGHSRIADIDRVLLNRENPITIMVFPGIFGGWSSVVLRL* # ORIGINAL: g5448.t1 original gene structure, not modified by PASA NODE_6476_length_564_cov_26.3027 AUGUSTUS gene 414 542 . + . ID=g5448;Name=g5448.t1 NODE_6476_length_564_cov_26.3027 AUGUSTUS mRNA 414 542 . + . ID=g5448.t1;Parent=g5448;Name=g5448.t1 NODE_6476_length_564_cov_26.3027 AUGUSTUS exon 414 542 . + . ID=g5448.t1.exon1;Parent=g5448.t1 NODE_6476_length_564_cov_26.3027 AUGUSTUS CDS 414 542 . + 0 ID=cds.g5448.t1;Parent=g5448.t1 #PROT g5448.t1 g5448 TGKYYAMKVLKKVEVVRLKQVEHIQSEKDILTQIKFPFIVNL* # ORIGINAL: g2875.t1 original gene structure, not modified by PASA NODE_6608_length_536_cov_97.6074_potentialcontaminant AUGUSTUS gene 2 536 . + . ID=g2875;Name=g2875.t1 NODE_6608_length_536_cov_97.6074_potentialcontaminant AUGUSTUS mRNA 2 536 . + . ID=g2875.t1;Parent=g2875;Name=g2875.t1 NODE_6608_length_536_cov_97.6074_potentialcontaminant AUGUSTUS exon 2 536 . + . ID=g2875.t1.exon1;Parent=g2875.t1 NODE_6608_length_536_cov_97.6074_potentialcontaminant AUGUSTUS CDS 2 536 . + 2 ID=cds.g2875.t1;Parent=g2875.t1 #PROT g2875.t1 g2875 DATDTARDGSAAVDVVTPLHDGSDGEEDVFEDEWENSELPSDDARTVDRASASVTEVASGYAGNVHTPFVSADRFAPLVIQPVPASAMLHVTAGDDDDGSSVHSESFASVEEYNGELFASPSMRTGDEVVDPPSEETGTEQQFYSPPTSPSQLSGQVELLDAMHPGASAAVEDDSDT # PASA_UPDATE: g5049.t1, single gene model update, valid-1, status:[pasa:asmbl_398,status:12],[pasa:asmbl_400,status:12], valid-1 NODE_1105_length_13923_cov_44.4745 . gene 8174 11302 . + . ID=g5049;Name=g5049.t1 NODE_1105_length_13923_cov_44.4745 . mRNA 8174 11302 . + . ID=g5049.t1;Parent=g5049;Name=g5049.t1 NODE_1105_length_13923_cov_44.4745 . five_prime_UTR 8174 8256 . + . ID=g5049.t1.utr5p1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 8174 8448 . + . ID=g5049.t1.exon1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 8257 8448 . + 0 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 8546 8645 . + . ID=g5049.t1.exon2;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 8546 8645 . + 0 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 8872 8956 . + . ID=g5049.t1.exon3;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 8872 8956 . + 2 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 9101 9288 . + . ID=g5049.t1.exon4;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 9101 9288 . + 1 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 9485 9702 . + . ID=g5049.t1.exon5;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 9485 9702 . + 2 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 9915 9998 . + . ID=g5049.t1.exon6;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 9915 9998 . + 0 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 10234 10328 . + . ID=g5049.t1.exon7;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 10234 10328 . + 0 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 10656 10755 . + . ID=g5049.t1.exon8;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 10656 10755 . + 1 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . exon 10986 11302 . + . ID=g5049.t1.exon9;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . CDS 10986 11060 . + 0 ID=cds.g5049.t1;Parent=g5049.t1 NODE_1105_length_13923_cov_44.4745 . three_prime_UTR 11061 11302 . + . ID=g5049.t1.utr3p1;Parent=g5049.t1 #PROT g5049.t1 g5049 MVNMTELLYLLSLPPPVTFCDWRVSIDVTAGYPNCKEYHSDFVAFMISGAVLYFLSAALFAAHLVYRKLVMKFTVMTEKGEIQPVEGLFLFLMVFCISRGIDCALVASNHFDVPTDVQAGELTFEWAWPFGFAAIVFYIGGLVRMLVKIKYDNWFYKVLRRPHVINGFCFVYAGSVFVVQMALAGWAGSADKWTPLNRYADVSTYLDRNLIRYLVWVGHCACLMIVTTVMCGIFIRTMENANVQTKAAGGDTSKVQSALNKMKASVICIDIVLATYIILNILACTQMYWGETNKGAAVGICVVWVYIPIVMIAFINILLHNRRTTSAQLNSMYDSVSQKKSEAHNDVEIRELKASASGVRGASLGSATDDEAQWRPTA* # PASA_UPDATE: g5048.t1, single gene model update, valid-1, status:[pasa:asmbl_397,status:3], valid-1 NODE_1105_length_13923_cov_44.4745 . gene 3479 6232 . + . ID=g5048;Name=g5048.t1 NODE_1105_length_13923_cov_44.4745 . mRNA 3479 6232 . + . ID=g5048.t1;Parent=g5048;Name=g5048.t1 NODE_1105_length_13923_cov_44.4745 . five_prime_UTR 3479 3603 . + . ID=g5048.t1.utr5p1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 3479 3698 . + . ID=g5048.t1.exon1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 3604 3698 . + 0 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 3799 3933 . + . ID=g5048.t1.exon2;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 3799 3933 . + 1 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 4090 4188 . + . ID=g5048.t1.exon3;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 4090 4188 . + 1 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 4671 4805 . + . ID=g5048.t1.exon4;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 4671 4805 . + 1 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 5093 5169 . + . ID=g5048.t1.exon5;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 5093 5169 . + 1 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 5390 5463 . + . ID=g5048.t1.exon6;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 5390 5463 . + 2 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 5659 5853 . + . ID=g5048.t1.exon7;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 5659 5853 . + 0 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . exon 6016 6232 . + . ID=g5048.t1.exon8;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . CDS 6016 6060 . + 0 ID=cds.g5048.t1;Parent=g5048.t1 NODE_1105_length_13923_cov_44.4745 . three_prime_UTR 6061 6232 . + . ID=g5048.t1.utr3p1;Parent=g5048.t1 #PROT g5048.t1 g5048 MAQAEDSPDKYFISKATGKRIVKRIWPVTSPKAVVFISHGVGEHCGRYEPLALKLNELGIHVIAHDHYGHGRSEGERVDVTDFGHYSDDALQHIDEVHATNPNAKFFVFGHSMGGLIAIETIRKRPEFFTGVVISGPAIIPDPATATPLKLFAAKVFAAIMPQLQLGSVDPSFLSHDKAQVEKYQTDPLNWHGGLKARWAVNILRTMEDLRGHLERVEWPFLALQASEDKLTNKEGAKELYAKAISKDKTLKMYEGYYHEILNETVDRNEVVYSDILTWIKERM* # PASA_UPDATE: g5047.t1, single gene model update, valid-1, status:[pasa:asmbl_399,status:12], valid-1 NODE_1105_length_13923_cov_44.4745 . gene 165 2900 . - . ID=g5047;Name=g5047.t1 NODE_1105_length_13923_cov_44.4745 . mRNA 165 2900 . - . ID=g5047.t1;Parent=g5047;Name=g5047.t1 NODE_1105_length_13923_cov_44.4745 . five_prime_UTR 2549 2900 . - . ID=g5047.t1.utr5p1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 2351 2900 . - . ID=g5047.t1.exon1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 2351 2548 . - 0 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 2160 2267 . - . ID=g5047.t1.exon2;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 2160 2267 . - 0 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 1927 2043 . - . ID=g5047.t1.exon3;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 1927 2043 . - 0 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 1586 1803 . - . ID=g5047.t1.exon4;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 1586 1803 . - 0 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 1340 1438 . - . ID=g5047.t1.exon5;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 1340 1438 . - 1 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 483 1231 . - . ID=g5047.t1.exon6;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 483 1231 . - 1 ID=cds.g5047.t1;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . exon 165 318 . - . ID=g5047.t1.exon7;Parent=g5047.t1 NODE_1105_length_13923_cov_44.4745 . CDS 165 318 . - 2 ID=cds.g5047.t1;Parent=g5047.t1;3_prime_partial=true #PROT g5047.t1 g5047 MMKVSAPYKYEVPRMAIDENRSQPVAMPSQADDHQEVPAVKEQPKPVILYDATSGRTYLKGKFLGKGGFAKCYELIEQSKGFSYAGKVVSKESLAKNKTKQKLASEIRIHRSLHHKHIVRFEHYFEDKQNVYIVLEMCHNKSMMDLLKKRERLTEPEARYYFLQILSAIEYMHKNKVIHRDLKLGNLFLNADMEIKVGDFGLATTVDTDGERKRTLCGTPNYIAPEILDGSNGHSFEVDIWSLGVILYTLLFGRPPFETESVKSTYQRIRLNQYTFPDCDGVSNAAIALIKAMLSSDPSARPSLAKIREDPFFRAGFTFASLSTAALVRPPTIPASSGAATTASMGMVPAFSPVPLLKRQGSERTVVPAQPATTAGALATIMPLPLPQSRRRPLADVNSDGVVPIGGQTVAQKQTLASAMGVERRQGSASPPERPVRSARAGGNLPDVARPPSGVLSAPLRPVSAAQSQHATGSLEDIHSLITESLSKRSAPAGSAGPLKPSSVPPLAWISKWVDYSNKYGLGYQLCDGSLGVLFNDSTKMILSNDG # ORIGINAL: g5050.t1 original gene structure, not modified by PASA NODE_1105_length_13923_cov_44.4745 AUGUSTUS gene 11762 13723 . + . ID=g5050;Name=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS mRNA 11762 13723 . + . ID=g5050.t1;Parent=g5050;Name=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS exon 11762 11935 . + . ID=g5050.t1.exon1;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS CDS 11762 11935 . + 0 ID=cds.g5050.t1;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS exon 12228 12310 . + . ID=g5050.t1.exon2;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS CDS 12228 12310 . + 0 ID=cds.g5050.t1;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS exon 12638 12689 . + . ID=g5050.t1.exon3;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS CDS 12638 12689 . + 1 ID=cds.g5050.t1;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS exon 13091 13723 . + . ID=g5050.t1.exon4;Parent=g5050.t1 NODE_1105_length_13923_cov_44.4745 AUGUSTUS CDS 13091 13723 . + 0 ID=cds.g5050.t1;Parent=g5050.t1 #PROT g5050.t1 g5050 MGLGVRVSRGQPAPRSVAVTVLAVAAVSLIFLAANVPFVLSAKYECSTCESLVEDFNRGLIKTEKANFGGGNTRWEEKSLRSWSRSEVRLTEIMESVCRSNHKCVSLIETHEETIEEWFYAEERVHTLREHLCVKGARACCPDNHYGPACLPCPGMSADGRHVCSGHGTCTGAGSKNGLGTCSCFSGFKGKRCDRCDAMYYESTEGDDDATVTATAAVDASDDGGSGEKGQGKEGAGGSARVGKQLCLPCNAACCKGCTGPSPSQCVDCAKGYFRKGDVCVGGYRNGVVVLKRECVLLCCFSLNCVLRLTSCT* # ORIGINAL: g3818.t1 original gene structure, not modified by PASA NODE_807_length_17467_cov_45.9338 AUGUSTUS gene 13841 17410 . + . ID=g3818;Name=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS mRNA 13841 17410 . + . ID=g3818.t1;Parent=g3818;Name=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 13841 14470 . + . ID=g3818.t1.exon1;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 13841 14470 . + 0 ID=cds.g3818.t1;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 14676 14858 . + . ID=g3818.t1.exon2;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 14676 14858 . + 0 ID=cds.g3818.t1;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 15056 15671 . + . ID=g3818.t1.exon3;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 15056 15671 . + 0 ID=cds.g3818.t1;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 15945 17090 . + . ID=g3818.t1.exon4;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 15945 17090 . + 2 ID=cds.g3818.t1;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 17391 17410 . + . ID=g3818.t1.exon5;Parent=g3818.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 17391 17410 . + 2 ID=cds.g3818.t1;Parent=g3818.t1 #PROT g3818.t1 g3818 MGFRGDKCAHRSRSSTEWLFLCSALLLACSPSHASVSTNLGSGGGGSCVRLDGIDDQVDLGTIDEIDDTFTIEMWIQTCKATDGQTFISKTSPSTGSILAELSYQHASVSFTWAAETWSEIPKVASGPFHVAVSVSPINASASHVIGYLNGVRVAETVAEIRISARSLGEDDALVPTPWVIGARTRRVRLGWQREKVMCGAVDEVRMYNTVRSDSQIKRDMSIVLSDAMLATAEYSGLQRYWSFDKFVGANSPGRDAAHSSAVLGGGLPDEKPSIVPSPFPLVGSYQSFTGRVSSDIAFTLSARDLTFGASLGGVNVSFAVSRLPAHGSIYLSVLGTRGALLLANVSYNATVSVSGGWAMLPLIYAPDAGLAGSRADQISFTLACVGNSTFSCAASYASSDNTVSFDIAGNVRPVAGKASALRFNGFDNCVFLSDFALGNNISIAFWVQYESIRWGQAFIGKHTLTGDNILVWGLYESGYHLTLRTDSHSVVWPIRFNEPHHLVITLGAVSATQTLGHVYDNGELVFEYLYQSVFGNTAGQPWSLGQEFDIGPNGALQSDYFAGYMDEVKFYNRTLDPSELASVAMPDNALSDPSLVYYYKMDEGTGTKISSRGRGPAQTGAATGTLPASGKGLFVDSPFDIPGSPNNFKVNEGTRTNITLTGADSNGDALSATVWSLPARGVLLDSSNATISSVPRTLNPPRLVYVAASGLARHTDVFLYTVKDYLVPSAVNATVVVDVLPEGPKLVGVMAAVDAVGRRSLALSFSVATNKPAVDTKDAVDALVLFSRPIGVNYVGEWSANGITLYIEIVSAGNITESALSGLQITMRGSLTDAAGSSAASASVLAITGGSWTFIPIVPKTLT* # ORIGINAL: g3814.t1 original gene structure, not modified by PASA NODE_807_length_17467_cov_45.9338 AUGUSTUS gene 409 4442 . - . ID=g3814;Name=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS mRNA 409 4442 . - . ID=g3814.t1;Parent=g3814;Name=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 4098 4442 . - . ID=g3814.t1.exon1;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 4098 4442 . - 0 ID=cds.g3814.t1;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 3041 3943 . - . ID=g3814.t1.exon2;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 3041 3943 . - 0 ID=cds.g3814.t1;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 1074 2899 . - . ID=g3814.t1.exon3;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 1074 2899 . - 0 ID=cds.g3814.t1;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 409 967 . - . ID=g3814.t1.exon4;Parent=g3814.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 409 967 . - 1 ID=cds.g3814.t1;Parent=g3814.t1 #PROT g3814.t1 g3814 MADSGGSYNREYGGNVAQQAFNMRQQTGLPTAPHSSDGTQPWIAHRDQMASSRPTSVRDADMTDNNGSCGGSNRNSTGSNMSGIMSYLQECDYGSIDIGNILATYFREQDENGQIPEQESGQPPQYGSADNRQYRGDACDYVSPGPTRGDVRNSTDAGMHSGGMGSTAAGEWASNPLGRGAGDTGTCMGGPYVTYARDGFTDEGGAHVPSDAGRTQRRPRQPPVQRQSMQDVERVLSTMTGQQHRAQPASSVGDTSSSGYPELQLPAPSDSTFGYCIGNTDYPASTFSEAAQEALVQHRANAPHGTAVDGPKGLREKLKRRLHRKQRNATAETTAIYGQPLPTFNTAPNLSTNTVGYHDYGTEAAGEGRRFAGVGQLSPAYGRADRSGGMAAAYAPTLSGVDEDDTRSLELPLSYQNAHNAPKNVAPSSANYYGYSNDGLPMLGTQPPAYGSVNNNNNDDDTATGDRNTNANISSDNNNSNSTSQQSAGAWANTLGFVMQSQGPTATRNQATDGAYVGPSYGAEANRNGRLFHSFSVASLPQRSFASGGMGGMRSAGAGPTFAQQRRTSVPGDTTSADPNLSFFVPGHRRARSLEGAKGDVMSAMGGDQQQHTTGLPPMTDEMLSLLNDLEAAGTMGTTLLSMQSMADEQSQHVCAPDNSSPGTVSTGASRGGVSSLASSRRRSLSVAHPGHSGCGLVARSAREKEDASPYARHKSPSKAEAFADETDEARPERQARVHSTVGGRGGRRGSRGKRQSPPGRQQLASIGVGVDADGGASSVPREYMRGRSASDVGPGGWGAYAAGQGQGQGQGQGQGHHAQFDVGGVGAVDGRNQLSTFDGTAFGGASGQDGRLYAMAYRALNPNGSGGDGFGYGDEGSQRPHQEYQLQQRQQQQQQQQQQQQQQQQQQQQQPQQLAPLISITGADVPFQQQLPCRGDSGNDGSTSDQVSTEGSRSSLGHINRSDEALDVGWHRRGVTVPRSPAAAMHLPIEKMSLVEDVDSLIALAPDDIEQRMASVGMESDYRRYLPPELLDSERGELKLELPPRPPQLARYLHGGHGHVPEWKWENESDRYASGRKKGVASNTTAKTAGGKKEGSEAQHVHNAPPQCASPQQRQHEEGKGESVLQQCQSSGEQCPPTPEWKPEKASGACTPTQPIENVGQIPPDPRDGSSVGGGGKQKSGNAPGGAAKRKRSTLSLLGRALIGCSRTS* # PASA_UPDATE: g3815.t1, single gene model update, valid-1, status:[pasa:asmbl_9489,status:12], valid-1 NODE_807_length_17467_cov_45.9338 . gene 6548 8476 . - . ID=g3815;Name=g3815.t1 NODE_807_length_17467_cov_45.9338 . mRNA 6548 8476 . - . ID=g3815.t1;Parent=g3815;Name=g3815.t1 NODE_807_length_17467_cov_45.9338 . exon 8051 8476 . - . ID=g3815.t1.exon1;Parent=g3815.t1 NODE_807_length_17467_cov_45.9338 . CDS 8051 8476 . - 0 ID=cds.g3815.t1;Parent=g3815.t1 NODE_807_length_17467_cov_45.9338 . exon 6548 7512 . - . ID=g3815.t1.exon2;Parent=g3815.t1 NODE_807_length_17467_cov_45.9338 . CDS 6829 7512 . - 0 ID=cds.g3815.t1;Parent=g3815.t1 NODE_807_length_17467_cov_45.9338 . three_prime_UTR 6548 6828 . - . ID=g3815.t1.utr3p1;Parent=g3815.t1 #PROT g3815.t1 g3815 MAGVKGMCRVSRVVAPAAIVQSTHASPQNNVHQAPSSGPSFLTSSPFAAGALANSSLYGAAPSGLLPGLGSSRGGLYGTAAGVGSVVYAPASQARSDKLATVPTAVEIAQGRAEELRCAPCDKDFVHVNQLVAHLKTHITCELAGVLSRPLETPEEIEAWRAERRKRWPTVDNVKQKEEELKRRIDSGEYVPSGRGRDRNDRKRGRKDQDGLSSKRQKNSPSKASATNAIAAAEPKSGLAALAAYGSSEEEEVEGDAPSSGAKATGGDANGVGDSVAPPTSGGRSRQPCKFYRRGFCKNGARCSFAHNVGGGRASVKGDNAGGAKGKASDAAKKPTLLQKLLADELQKERTVLLGAIRYILASNFFDVS* # ORIGINAL: g3817.t1 original gene structure, not modified by PASA NODE_807_length_17467_cov_45.9338 AUGUSTUS gene 11427 13636 . - . ID=g3817;Name=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS mRNA 11427 13636 . - . ID=g3817.t1;Parent=g3817;Name=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 13573 13636 . - . ID=g3817.t1.exon1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 13573 13636 . - 0 ID=cds.g3817.t1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 12917 13256 . - . ID=g3817.t1.exon2;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 12917 13256 . - 2 ID=cds.g3817.t1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 12667 12794 . - . ID=g3817.t1.exon3;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 12667 12794 . - 1 ID=cds.g3817.t1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 12164 12375 . - . ID=g3817.t1.exon4;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 12164 12375 . - 2 ID=cds.g3817.t1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 11907 12043 . - . ID=g3817.t1.exon5;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 11907 12043 . - 0 ID=cds.g3817.t1;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS exon 11427 11628 . - . ID=g3817.t1.exon6;Parent=g3817.t1 NODE_807_length_17467_cov_45.9338 AUGUSTUS CDS 11427 11628 . - 1 ID=cds.g3817.t1;Parent=g3817.t1 #PROT g3817.t1 g3817 MYQNTFAVKSFYGLQYWAPLSAVYPANTTVGLIFDIDGVLIRGKQVLPQAKRAFQHLTTRRPDGTRDFNVPVIFMTNGGGCFEEYKARQLSDWLDIHVHPQQIVLSHSPMRMFTEFFDKDVLVVGQGPIREVARSYGFQMVHTLNDITKAFPVLDAIDHSRPKTTRPHFDPSFPKIEAIFCMSDPLQWETHLQVLCDLLTSDGRPGQQVREQMVHMFFSNPDFLWQAEWSQPRFGQGAFASSLSALYKELTGNVLRRTYFGKPHGITYEYGEALLEKQAKSLGFNGIHTVFGIGDNPRSDIRGANARPRTRSVLVRTGVYKGALHENDEEDPAAHVVEDVLHAVEMILSTHPTAKSAVIA* # PASA_UPDATE: g3816.t1, single gene model update, valid-1, status:[pasa:asmbl_9486,status:12], valid-1 NODE_807_length_17467_cov_45.9338 . gene 8901 10276 . + . ID=g3816;Name=g3816.t1 NODE_807_length_17467_cov_45.9338 . mRNA 8901 10276 . + . ID=g3816.t1;Parent=g3816;Name=g3816.t1 NODE_807_length_17467_cov_45.9338 . five_prime_UTR 8901 9021 . + . ID=g3816.t1.utr5p1;Parent=g3816.t1 NODE_807_length_17467_cov_45.9338 . exon 8901 9212 . + . ID=g3816.t1.exon1;Parent=g3816.t1 NODE_807_length_17467_cov_45.9338 . CDS 9022 9212 . + 0 ID=cds.g3816.t1;Parent=g3816.t1 NODE_807_length_17467_cov_45.9338 . exon 9335 10276 . + . ID=g3816.t1.exon2;Parent=g3816.t1 NODE_807_length_17467_cov_45.9338 . CDS 9335 10025 . + 1 ID=cds.g3816.t1;Parent=g3816.t1 NODE_807_length_17467_cov_45.9338 . three_prime_UTR 10026 10276 . + . ID=g3816.t1.utr3p1;Parent=g3816.t1 #PROT g3816.t1 g3816 MWSTPSPNGSDSGFSSSGEYVAVGAKTEAYSPALCLDSDVSSSSISRKRKASYTLSPEEKSKKRRQCNRACSQRIRDRNKQHTQLLEEKVKSCEQENEDLHRRLSNLDAENAAVRCKIDEIKAFLEAARAGNEYDALQNVDAVEPSDASSVVTRGMATLVTDTMSMPCVFADGESVSSGSAVPGIPLQWERLSTARNSLASAVVISLLAFMLVANVPSTLITAAITRARANFSALAEASTPSSETTLSARTVEGSFRTTGWEMHASKGKKPRRLLSQVTFSSWISSLKPIEVS* # ORIGINAL: g4051.t1 original gene structure, not modified by PASA NODE_3900_length_2542_cov_39.1382 AUGUSTUS gene 972 1901 . + . ID=g4051;Name=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS mRNA 972 1901 . + . ID=g4051.t1;Parent=g4051;Name=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS exon 972 974 . + . ID=g4051.t1.exon1;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS CDS 972 974 . + 0 ID=cds.g4051.t1;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS exon 1123 1150 . + . ID=g4051.t1.exon2;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS CDS 1123 1150 . + 0 ID=cds.g4051.t1;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS exon 1313 1452 . + . ID=g4051.t1.exon3;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS CDS 1313 1452 . + 2 ID=cds.g4051.t1;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS exon 1761 1901 . + . ID=g4051.t1.exon4;Parent=g4051.t1 NODE_3900_length_2542_cov_39.1382 AUGUSTUS CDS 1761 1901 . + 0 ID=cds.g4051.t1;Parent=g4051.t1 #PROT g4051.t1 g4051 MSKIEFLSPEGLRVDGRRANELRKVHCRLGVFKQADGSAYYEQGNTKVLATVYGPHEPRMRNKALHDRTLIQCEFSVATFSTGERKKRAKGDRYWVRFLTLSD* # ORIGINAL: g6716.t1 original gene structure, not modified by PASA NODE_3768_length_2792_cov_40.8392 AUGUSTUS gene 242 2548 . - . ID=g6716;Name=g6716.t1 NODE_3768_length_2792_cov_40.8392 AUGUSTUS mRNA 242 2548 . - . ID=g6716.t1;Parent=g6716;Name=g6716.t1 NODE_3768_length_2792_cov_40.8392 AUGUSTUS exon 2358 2548 . - . ID=g6716.t1.exon1;Parent=g6716.t1 NODE_3768_length_2792_cov_40.8392 AUGUSTUS CDS 2358 2548 . - 0 ID=cds.g6716.t1;Parent=g6716.t1 NODE_3768_length_2792_cov_40.8392 AUGUSTUS exon 242 2095 . - . ID=g6716.t1.exon2;Parent=g6716.t1 NODE_3768_length_2792_cov_40.8392 AUGUSTUS CDS 242 2095 . - 1 ID=cds.g6716.t1;Parent=g6716.t1 #PROT g6716.t1 g6716 SLSRTLRRPDRGFPSELDKLSNVASGLLAEARTKRIGVTFVLDGVDQIDAKNAAHQLRWLPTKWNGARVMFSISAEGSDALKKSLSSRGYKSLELEHWAPEDMQLYLHDTLERSSKTLSMTQEQAILGGAQSRFPLFLTTLVDELLTFGSFEKIDEKIAECMRCRDATELFAHILARLDADFRGSGDAGSSVGEVLACLYLSHNGLSEDELGAVLGIEQTQLLPLLFSLRNSLVSRSGLLGFSHGQLKKAVEDTYVRNPKTKVILPSASVAASKLVYYFSAALSVLPPMPSEQSSSSHAWSLSANAVEMASKAVIDSARRIAEELPWVLCNAPSLSTRKDTPTKLKQCLAEPRVFMSLKSTAEFDLARYWRETGASGEELAVALRASAGGLGCGPLSVLNGKFQFCIAQFLTDHGHVAHALPFAEECLGGRNIETVPEAEFAPAAALAGHIMWHQSSYAKAAAAFERALACYRKKGANTLDVACTLDSLGKVLQSQALFAEAEEKLKLALSIKEKLLGVDHEETATTVTNLASLYLAKGDLDESLKLQRRGLKSLETALGEDHPYVANACSALAAIQDSRGDPANAIDLERRSLKIREEKYGPDHPDVAHSCNKIASRMHKLKKDVDEAEAFFERALRIYEDKLGPDHPHVADVLENLAEVALEKDAYDESLRMMERARDI # ORIGINAL: g4181.t1 original gene structure, not modified by PASA NODE_605_length_20304_cov_42.988 AUGUSTUS gene 9732 11288 . + . ID=g4181;Name=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS mRNA 9732 11288 . + . ID=g4181.t1;Parent=g4181;Name=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 9732 9821 . + . ID=g4181.t1.exon1;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 9732 9821 . + 0 ID=cds.g4181.t1;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 10049 10219 . + . ID=g4181.t1.exon2;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 10049 10219 . + 0 ID=cds.g4181.t1;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 10348 10474 . + . ID=g4181.t1.exon3;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 10348 10474 . + 0 ID=cds.g4181.t1;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 10709 10841 . + . ID=g4181.t1.exon4;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 10709 10841 . + 2 ID=cds.g4181.t1;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 11189 11288 . + . ID=g4181.t1.exon5;Parent=g4181.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 11189 11288 . + 1 ID=cds.g4181.t1;Parent=g4181.t1 #PROT g4181.t1 g4181 MIGPLLPRLNAMRVVLASTSPRRKELLATLGVEFTVRGSSFAEDFDKAQFPTAADYVAATAYQKTVDVARRIAHEGAGLIIGADTVVVLDGEILEKPRDVAHARDMLKRLSGRTHSVVTGVVLLRYTDKEGEYATVQFTEQTTVRFAALTDDVIEEYVSTGEPIDKAGSYPLSPGAAGRWWPGLMGVISMLSAFQCTDSVPKCVPC* # ORIGINAL: g4179.t1 original gene structure, not modified by PASA NODE_605_length_20304_cov_42.988 AUGUSTUS gene 1905 3510 . + . ID=g4179;Name=g4179.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS mRNA 1905 3510 . + . ID=g4179.t1;Parent=g4179;Name=g4179.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 1905 1919 . + . ID=g4179.t1.exon1;Parent=g4179.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 1905 1919 . + 0 ID=cds.g4179.t1;Parent=g4179.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 2032 3510 . + . ID=g4179.t1.exon2;Parent=g4179.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 2032 3510 . + 0 ID=cds.g4179.t1;Parent=g4179.t1 #PROT g4179.t1 g4179 MTRVPTDPTNGVGLAHEQLRLKLWMSTVDPYVAVPNVPLWSKGPPASVWRDLSNLVAEHLSKKVGSEMSTHTIDELKRVVAEELPNVAERIYTATGTTGSTKAPRDRNSLGASFACVSTALTRKSLGIARPSPATPLTPDQVNNLKMQTLVLVKLTIALAGSATADARLGKSHTNAGIVELMGACVLVRFYSLVPAILRGAGNVCREYISSFNGKKFAVECPPFYCVGTRWMGHVEDLLEDLGAMAAGDASCAPASWEDSHEMFFMGTARLRLEGILLRISTGAYADFVQREPWAGGQRGSPLDALRAAHGAVFAASSQSISGEYVVPDALYELAAHTMVGVPGVVERNPEAAARHLIEGWKRGSARCAETVASGAIPGLASEREAADARVVAAVMGSSPSTAWLVAEFTRKSRQLLASVFRAHLCTQFMDVVPSERQLRVSKWGAAAMRSRQPPRPPFPSTGIAEQNALRTRSMQADIAAPPPTLLIGDDKYGMDM* # ORIGINAL: g4183.t1 original gene structure, not modified by PASA NODE_605_length_20304_cov_42.988 AUGUSTUS gene 14661 20177 . + . ID=g4183;Name=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS mRNA 14661 20177 . + . ID=g4183.t1;Parent=g4183;Name=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 14661 14729 . + . ID=g4183.t1.exon1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 14661 14729 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 14828 15001 . + . ID=g4183.t1.exon2;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 14828 15001 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 15189 15412 . + . ID=g4183.t1.exon3;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 15189 15412 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 15574 15964 . + . ID=g4183.t1.exon4;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 15574 15964 . + 1 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 16385 16487 . + . ID=g4183.t1.exon5;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 16385 16487 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 16599 16693 . + . ID=g4183.t1.exon6;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 16599 16693 . + 2 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 16819 16888 . + . ID=g4183.t1.exon7;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 16819 16888 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 17020 17119 . + . ID=g4183.t1.exon8;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 17020 17119 . + 2 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 17232 17457 . + . ID=g4183.t1.exon9;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 17232 17457 . + 1 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 17621 17740 . + . ID=g4183.t1.exon10;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 17621 17740 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 18013 18675 . + . ID=g4183.t1.exon11;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 18013 18675 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 19018 19209 . + . ID=g4183.t1.exon12;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 19018 19209 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 19447 19607 . + . ID=g4183.t1.exon13;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 19447 19607 . + 0 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 19793 19951 . + . ID=g4183.t1.exon14;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 19793 19951 . + 1 ID=cds.g4183.t1;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 20066 20177 . + . ID=g4183.t1.exon15;Parent=g4183.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 20066 20177 . + 1 ID=cds.g4183.t1;Parent=g4183.t1 #PROT g4183.t1 g4183 MPVPMGTDAVTSEELHAYFSSDEELDDECSQYSPSDDEAEVEAPPPAEDAADCSDGVAEGEKAKQIERENAAKSAELPPEQMLQLYGSLLRCIMHPIIAASDGGTKKKKTSGSGADRHLLDRRALSQARQRLADHIADNKTRAVSKDDQLFLDAVRWICAGVLTRETDASASSSGRRPHTAVEDLVAVFRTNLRRRLTARAQADVAATGSTQMSHAAEEEFMASRIRLFSSIAFGEGRASGVSETAAPMGKEGLVASFRAILHIDDEMHAKARAAYVPDSQEELAKNDIMHGAWKEEERESVRMLLDRLEGTEDDEHACKTCGHSHRRGACPSRSSAAAVSERRSGTMSAHKDIAFAYTIRVSVLEARGLPPSMAESRHVYCTMELDDQNFRTAPVAASSPCWNEQCKFADVRQPSVSLRFRLLSPRAGMLSLDDKLVGRITVPSGLSERHRAAQAQWYDLEDPKKGGLSKIALKLKIEVEFPQAVKFCGPLWSMGGPFKKCKNRTFVVLEDGDSSSLCAYGADDTTPSVVLDLSRHLIDYPEDTEQGTLSRSVALVGSAGGAAPDAPPCAMRLSLSSASATASSPSSAPDAAVLLGAPDDAMRQKWLQCVAKATRQPKMPKPKERRAAGGSKVAHFFGDSKSEAAVFSLDTWPQHETLLGHLVDLSVRRAVDSGGEQGWLPVGVSAMLTEYCARYGVRDVFRRVSHLSALVSAARTNYVDPSLLRKLFGDCQRRIAGNNVTRTEMALFEESAVKLRDLLVEEVGGYKYSFPFNAPEGALAVTLDLFGDVMQSVGSDQPIGHIVLACLQKGALATYERLSAVTCSAGAESQAIKSLVELSRMAGLVMEELSHDRWYFSEVFAKYGDLIKFNANIYFELFNAEAEDAIVLLPPTTWEAIDLFVKLNDFMRNNGLDSCVFAHRLAKLFEPIVTRYVSAKEEELGAHARVAVQRDT # PASA_UPDATE: g4182.t1, single gene model update, valid-1, status:[pasa:asmbl_8446,status:3], valid-1 NODE_605_length_20304_cov_42.988 . gene 11707 13910 . - . ID=g4182;Name=g4182.t1 NODE_605_length_20304_cov_42.988 . mRNA 11707 13910 . - . ID=g4182.t1;Parent=g4182;Name=g4182.t1 NODE_605_length_20304_cov_42.988 . five_prime_UTR 13666 13910 . - . ID=g4182.t1.utr5p1;Parent=g4182.t1 NODE_605_length_20304_cov_42.988 . exon 12823 13910 . - . ID=g4182.t1.exon1;Parent=g4182.t1 NODE_605_length_20304_cov_42.988 . CDS 12823 13665 . - 0 ID=cds.g4182.t1;Parent=g4182.t1 NODE_605_length_20304_cov_42.988 . exon 11707 12607 . - . ID=g4182.t1.exon2;Parent=g4182.t1 NODE_605_length_20304_cov_42.988 . CDS 12251 12607 . - 0 ID=cds.g4182.t1;Parent=g4182.t1 NODE_605_length_20304_cov_42.988 . three_prime_UTR 11707 12250 . - . ID=g4182.t1.utr3p1;Parent=g4182.t1 #PROT g4182.t1 g4182 MGSCTSKSAAVGPAEATVAAPPKAAPAPAASAAAASAPTATAPAKAAPAPAPQPATQPATQAPSAAGAVGAPAGEVHHGDEHHHHRPDLKLDIVPQKKAVSVNHVPEVHAPDDRTPITDDEDTNSTDGAGLGRMMPKTPNPVDDIELTQGELNPKDSGMLELRRSSLGIKYRKLNLEWAFPPLILCGISGGGKRTIARKLIAEFPDQFMFAVSHTTRPPRAGEVDGEDYHFATEHEMKMGMLGGDFVEKVEFYDHTYALSFESVKKVAVAGKMCVIPLEYEGVVQMRQFEDLKALKPRYVLIKPPSMATLETRLNQRGDTQEQIIEKMNKAPEYDAHEKTSDLWDLVIVNDKIEVAYMKIKEFLAPDLGWGPAQLGQLEPVPLGMDDEEDDAPDLAAPK* # ORIGINAL: g4180.t1 original gene structure, not modified by PASA NODE_605_length_20304_cov_42.988 AUGUSTUS gene 4403 9370 . - . ID=g4180;Name=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS mRNA 4403 9370 . - . ID=g4180.t1;Parent=g4180;Name=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 6763 9370 . - . ID=g4180.t1.exon1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 6763 9370 . - 0 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 6413 6525 . - . ID=g4180.t1.exon2;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 6413 6525 . - 2 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 6100 6176 . - . ID=g4180.t1.exon3;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 6100 6176 . - 0 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 5510 5741 . - . ID=g4180.t1.exon4;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 5510 5741 . - 1 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 5257 5397 . - . ID=g4180.t1.exon5;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 5257 5397 . - 0 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 4978 5101 . - . ID=g4180.t1.exon6;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 4978 5101 . - 0 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 4733 4800 . - . ID=g4180.t1.exon7;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 4733 4800 . - 2 ID=cds.g4180.t1;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS exon 4403 4546 . - . ID=g4180.t1.exon8;Parent=g4180.t1 NODE_605_length_20304_cov_42.988 AUGUSTUS CDS 4403 4546 . - 0 ID=cds.g4180.t1;Parent=g4180.t1 #PROT g4180.t1 g4180 MAHFHGNRRPDDASVANNKHNNDDAPESDSDDTDNGSVLTDSIPTPRATSREDGRPTGQHVEDALARLLASIGGGRPLHVVAEYAQTTGLLAAIGSLYRLLLTMRQLPANPYPGFVRRLRKKEQLFGLLRESVDELAARAFFDTADAAPSSPLEIARTIGVPAGSELWGIRAIVRTADPFSVRLLLPAVADSTRHVIEASGDCRCQMLPSLAGAYVHYDAISPTPTLLRIRQDYVLMGADKARGIDLFAQNVLRDALTFDSGEDRMFLGLAIGTDSDDSSLWTPEMVARNREGLVSAVKVAVAKHSPIHIDGVFRLRLRVAGSVSSVYRLGRKDHVFHWRGRSSGAPALETTAAYAHESLCEGVFFERRHAETYASLFEGRPSASLAGAGVASIRIAVARNAHAGGHSSHAGNPYPAYEQAAMLAAAEGRDDTLVALARVNRTIAVRLCAAGSQARTLARILEESARGGARSSVSVVLASTFGEFYESIGALMGRNGSACLSELESLRAAIDRRVDAVARHMQRPPQTSARVSPLVRHLESLSRYLGAIGINMLAEAVAAFGDARKTVADCVSRHLRLITEEHALVQAARVRDRVGGPAQDGKKLGQPVAGQRKGKGGKGGERDVKADKTLRKGRAAGDAVDAGGASHEVAHGAESPLNDTAMVLSVRLAGAHQSGPSSVRYEATILQYAVDMRLDSVFFEGLVEAFTAPVLAANPYPLLVRQLRLAVHRVDHWAEADAAILKRAVNSSVPMIDPGAHVYGLPGKQLFGSHAAIALADAAHLETLLDKLSAVANGNITWRQGSSKITFSTAFCGRTILYGRCLPHVTEVDVREDYYAEGPTLEDSLHLFARNVYGSALDMAEKSVAYIHEFRVGDAKWTLSTATAQRSLFLTDVARAASNRQPIRLRAYFPMDWRYVAVTKHFVLHYGSGNADVFVSLLPSADPTAPHTTVFRAKDKATLWLSRTDADAGRPASVQTAVAHANARARDEWVAGNVLAAYRWLLVAAAVKKDFAILPSVFRMFHSVVEQVDYLLGLSLTIRELIAAELEGSEATAGDEAASRVDLGLLNLMYAEYVRKVDWLLSSHSCTSTAAFNEAVRGRLQLLVTSESSSADLELVIHEETSVALEEISDLLQCVGDGIASEMHTLCPDMAALIDGLMRDAPPAARK* # ORIGINAL: g11737.t1 original gene structure, not modified by PASA NODE_3865_length_2597_cov_34.1392 AUGUSTUS gene 347 2197 . + . ID=g11737;Name=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS mRNA 347 2197 . + . ID=g11737.t1;Parent=g11737;Name=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS exon 347 486 . + . ID=g11737.t1.exon1;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS CDS 347 486 . + 2 ID=cds.g11737.t1;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS exon 861 1463 . + . ID=g11737.t1.exon2;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS CDS 861 1463 . + 0 ID=cds.g11737.t1;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS exon 1750 1886 . + . ID=g11737.t1.exon3;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS CDS 1750 1886 . + 0 ID=cds.g11737.t1;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS exon 2092 2197 . + . ID=g11737.t1.exon4;Parent=g11737.t1 NODE_3865_length_2597_cov_34.1392 AUGUSTUS CDS 2092 2197 . + 1 ID=cds.g11737.t1;Parent=g11737.t1 #PROT g11737.t1 g11737 AYDSDDSSADDGMRDDIGRHVRRVMHVQSVSHWAAANIGPYSQGVHVGPLVFVAGQIGLHPGSMTLAATPSDTQHLGNELLRKRRRPSARHSDPDSDAYYDYEKECIAAASEYVSRMSMSTVGSGTESVTSASAASGPSVLVQGTIALRSVGRVSAAMGGRDLPLQSSRGLSCTSSVGASCFDDSGEEEGISGDGDGDDSEGNDVGNAMGSDADGASSCVSCVCYLVDAGHVAIAQALWESARFTRNDATPLYVVVPQLPRGALIEWQSIMVHASSKWNGGDRACLEADAGYIYTPIAYIRFWTLRVRRALCLHCEWDSGGENIRWR* # ORIGINAL: g2966.t1 original gene structure, not modified by PASA NODE_4429_length_1631_cov_32.7648_potentialcontaminant AUGUSTUS gene 994 1602 . - . ID=g2966;Name=g2966.t1 NODE_4429_length_1631_cov_32.7648_potentialcontaminant AUGUSTUS mRNA 994 1602 . - . ID=g2966.t1;Parent=g2966;Name=g2966.t1 NODE_4429_length_1631_cov_32.7648_potentialcontaminant AUGUSTUS exon 994 1602 . - . ID=g2966.t1.exon1;Parent=g2966.t1 NODE_4429_length_1631_cov_32.7648_potentialcontaminant AUGUSTUS CDS 994 1602 . - 0 ID=cds.g2966.t1;Parent=g2966.t1 #PROT g2966.t1 g2966 MQTTLPNSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQFAPQMRSTDFNSVTMDWLSTGDSHAMQQMGQIGQMQMQALGGALMGDVDPVGARAVGMASSYPPGPPQGMAASGPQQQQPQQHHHHHQQQQQHQQHQQHQQQQQQQQQQQTQQQQQQQQQQQQQQTSRTLNEQMALAILNDGMDGMYGL* # PASA_UPDATE: g8795.t1, single gene model update, valid-1, status:[pasa:asmbl_4217,status:3], valid-1 NODE_2399_length_6417_cov_41.6143 . gene 3148 4813 . + . ID=g8795;Name=g8795.t1 NODE_2399_length_6417_cov_41.6143 . mRNA 3148 4813 . + . ID=g8795.t1;Parent=g8795;Name=g8795.t1 NODE_2399_length_6417_cov_41.6143 . five_prime_UTR 3148 3207 . + . ID=g8795.t1.utr5p1;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . exon 3148 3210 . + . ID=g8795.t1.exon1;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . CDS 3208 3210 . + 0 ID=cds.g8795.t1;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . exon 3787 3983 . + . ID=g8795.t1.exon2;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . CDS 3787 3983 . + 0 ID=cds.g8795.t1;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . exon 4361 4813 . + . ID=g8795.t1.exon3;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . CDS 4361 4577 . + 1 ID=cds.g8795.t1;Parent=g8795.t1 NODE_2399_length_6417_cov_41.6143 . three_prime_UTR 4578 4813 . + . ID=g8795.t1.utr3p1;Parent=g8795.t1 #PROT g8795.t1 g8795 MGRVRTKTVKKAARVIIEKYYTRLTQDFHTNKRISAEIAIIPTKRLRNKIAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNFVPEISAIDLETIEIDADTKAMLKDMDFGNISNVTVAAPAPVSTGNFKPRRQNKD* # PASA_UPDATE: g8794.t1, single gene model update, valid-1, status:[pasa:asmbl_4220,status:3], valid-1 NODE_2399_length_6417_cov_41.6143 . gene 1627 2750 . - . ID=g8794;Name=g8794.t1 NODE_2399_length_6417_cov_41.6143 . mRNA 1627 2750 . - . ID=g8794.t1;Parent=g8794;Name=g8794.t1 NODE_2399_length_6417_cov_41.6143 . five_prime_UTR 2701 2750 . - . ID=g8794.t1.utr5p1;Parent=g8794.t1 NODE_2399_length_6417_cov_41.6143 . five_prime_UTR 2516 2576 . - . ID=g8794.t1.utr5p2;Parent=g8794.t1 NODE_2399_length_6417_cov_41.6143 . exon 2701 2750 . - . ID=g8794.t1.exon1;Parent=g8794.t1 NODE_2399_length_6417_cov_41.6143 . exon 1627 2576 . - . ID=g8794.t1.exon2;Parent=g8794.t1 NODE_2399_length_6417_cov_41.6143 . CDS 1865 2515 . - 0 ID=cds.g8794.t1;Parent=g8794.t1 NODE_2399_length_6417_cov_41.6143 . three_prime_UTR 1627 1864 . - . ID=g8794.t1.utr3p1;Parent=g8794.t1 #PROT g8794.t1 g8794 MSRLTAIALAVLCALISSTQGQLVGPQAPANIPMYTYSATLSNYGFSSSLATATVLLRYVPSLGIAQLNIETSGFPSGTNVLGIHAHFPAVTTGTTNILLVFCNTAPFPLTTATNTGCSQTSANTAATYYGAPLAPATWASIQMSQSNLVWPPPSFYVNVHTNIEFNATASSPNLQGIIRGPLQLYSQENYKGSAHTATAGIVTLVFAIVASLAML* # ORIGINAL: g8796.t1 original gene structure, not modified by PASA NODE_2399_length_6417_cov_41.6143 AUGUSTUS gene 5293 6129 . - . ID=g8796;Name=g8796.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS mRNA 5293 6129 . - . ID=g8796.t1;Parent=g8796;Name=g8796.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS exon 6038 6129 . - . ID=g8796.t1.exon1;Parent=g8796.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS CDS 6038 6129 . - 0 ID=cds.g8796.t1;Parent=g8796.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS exon 5293 5704 . - . ID=g8796.t1.exon2;Parent=g8796.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS CDS 5293 5704 . - 1 ID=cds.g8796.t1;Parent=g8796.t1 #PROT g8796.t1 g8796 MAVDKFDKQYAYNIRHNYGKEGKRADYTPYSCMRIIMGTAPATGDHHGCPFKHHDQDVLRNLMQTRGVSATGINEVLQLIKEGHFQLACTRYYEAANKMEAGGAGFVVNHPNQYFDEAHKIILGKAGGVKSEPAGAAEEEGMAVAMAIADEDDVLANVPMPMEVDGM* # ORIGINAL: g8793.t1 original gene structure, not modified by PASA NODE_2399_length_6417_cov_41.6143 AUGUSTUS gene 2 106 . + . ID=g8793;Name=g8793.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS mRNA 2 106 . + . ID=g8793.t1;Parent=g8793;Name=g8793.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS exon 2 106 . + . ID=g8793.t1.exon1;Parent=g8793.t1 NODE_2399_length_6417_cov_41.6143 AUGUSTUS CDS 2 106 . + 0 ID=cds.g8793.t1;Parent=g8793.t1 #PROT g8793.t1 g8793 CPSSPLTGLKYDNLRVVYREHLEKAYPALKKVED* # ORIGINAL: g11344.t1 original gene structure, not modified by PASA NODE_3259_length_3896_cov_34.7503 AUGUSTUS gene 223 3896 . - . ID=g11344;Name=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS mRNA 223 3896 . - . ID=g11344.t1;Parent=g11344;Name=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 3081 3896 . - . ID=g11344.t1.exon1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 3081 3896 . - 2 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 2738 2862 . - . ID=g11344.t1.exon2;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 2738 2862 . - 2 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 2446 2518 . - . ID=g11344.t1.exon3;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 2446 2518 . - 0 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 2224 2291 . - . ID=g11344.t1.exon4;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 2224 2291 . - 2 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 1804 1863 . - . ID=g11344.t1.exon5;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 1804 1863 . - 0 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 1468 1564 . - . ID=g11344.t1.exon6;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 1468 1564 . - 0 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 1191 1270 . - . ID=g11344.t1.exon7;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 1191 1270 . - 2 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 948 1025 . - . ID=g11344.t1.exon8;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 948 1025 . - 0 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 593 720 . - . ID=g11344.t1.exon9;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 593 720 . - 0 ID=cds.g11344.t1;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS exon 223 331 . - . ID=g11344.t1.exon10;Parent=g11344.t1 NODE_3259_length_3896_cov_34.7503 AUGUSTUS CDS 223 331 . - 1 ID=cds.g11344.t1;Parent=g11344.t1 #PROT g11344.t1 g11344 PLLAHPAVHVASLYLAQPSVLPKNLAEAVTFDGTNRALASGPDWTTPGVRLVSKWSDGTLAASSYPGNKLLPISVSLLDARNLTYNAREGTIVEAKLSLLNLTQPIGSVPRATLVGVTRRVLGSGNVTFELGARGYPGWYAVTFDLVNWPVPVSRGSVTLYLFDCEKYASTRALTDDPPYPHACTDILAQSASAHTGGMTGGQVAAAAAVPVLLVSLIAIAGLVYVMKGRRKQASLDTHARFIARNVVGKEALEALQVEKEDIEVQMRLGEGEFGVVYSGRVFIDNKWRVCAIKTLREGSTDAERADFLAECEIMRDTSHPNVVGMIAMSFREAPMQVLLEYAAFGSLRDYLHGVPVKRQNSPAVMLQLVQFARDVAEGMAYLSSRGIVHRDLAVRNCLLGNTASGDYIVKIADFGLSRRIGNSEYLHKTKGRKLPVRLLAPECATRRVFSVQSDVWAYGVCLWECWSFAQVPYYQLGNDRVLPAVIGGTRLECPEWCPDCVYSVMKRCWLENPDARPSFQSLASFFAEYEALSVDVIQRRRTR # ORIGINAL: g13285.t1 original gene structure, not modified by PASA NODE_2840_length_5005_cov_44.503 AUGUSTUS gene 639 2339 . + . ID=g13285;Name=g13285.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS mRNA 639 2339 . + . ID=g13285.t1;Parent=g13285;Name=g13285.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS exon 639 2339 . + . ID=g13285.t1.exon1;Parent=g13285.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS CDS 639 2339 . + 0 ID=cds.g13285.t1;Parent=g13285.t1 #PROT g13285.t1 g13285 MKSRREKTNSRAIADRVGREDPFDVTEGPHNVIVHLEHFPGSVLASDSDDNDASRTSKRCDDSRQDRSLKPQGGHQSDRHLDSESKGARESLCATESVRATMQLKKEQRVGSASANSTPFGGSGDRIPVRMRLPSAIKSDSPWKELNANNFHQESEERKVYMNVVVLNLADISTSTQSYTMRLELWVAWALTEEEVRNYITDPDNWKPDIHPQPTPWTINIEETTRMPFLSGRFTQVFMFRGKVVACECTLVTARFLESMELVNFPFDSQHFNFHIGLRCDCDIPLMIDEHNRVLENSVDSIGGFLNFDGRAMAKLKLDKKGCTLNVRTHLLSLQDFILHNIECEIENMERDVPFLHCSIRLSRNYQPYVFRIFVPMSIIMVSSTLAFRFDSEGALSDRLSFVATIMLTVVAFMFILSGALPQIPYLTLIDKYMSLAFAYVGWVGVMCVLLNWWDLEGTRAEITVFAIGIGFSIILHVALIFIFRHYREVEMRKLSMDRHTISQLEDERLGEPKDRQEFLVHTDIHPVKANNVHEGTLRNDIRPQEAAGWLFEGQGHLVGKGELRK* # ORIGINAL: g13286.t1 original gene structure, not modified by PASA NODE_2840_length_5005_cov_44.503 AUGUSTUS gene 3909 4746 . - . ID=g13286;Name=g13286.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS mRNA 3909 4746 . - . ID=g13286.t1;Parent=g13286;Name=g13286.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS exon 4322 4746 . - . ID=g13286.t1.exon1;Parent=g13286.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS CDS 4322 4746 . - 0 ID=cds.g13286.t1;Parent=g13286.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS exon 3909 4026 . - . ID=g13286.t1.exon2;Parent=g13286.t1 NODE_2840_length_5005_cov_44.503 AUGUSTUS CDS 3909 4026 . - 1 ID=cds.g13286.t1;Parent=g13286.t1 #PROT g13286.t1 g13286 MAPSTKLLHLATWLLSFQAAFVLDELVEEIAVDVCQEVHRSVKTALRRPLPPVRHDTETTAAITTPATTTATTTTATTTAAGITPFEFGTQRPGYDIFGRAPSKIAGETFECTNCSRVVVASRFAPHLEKCMGMGRSRQSRRLNPAAAKSEGAPSVRRYDFGDSDEDERDGSWSDKPKGG* # PASA_UPDATE: g11076.t1, single gene model update, valid-1, status:[pasa:asmbl_5081,status:12], valid-1 NODE_2823_length_5051_cov_72.9381 . gene 155 1432 . - . ID=g11076;Name=g11076.t1 NODE_2823_length_5051_cov_72.9381 . mRNA 155 1432 . - . ID=g11076.t1;Parent=g11076;Name=g11076.t1 NODE_2823_length_5051_cov_72.9381 . five_prime_UTR 1388 1432 . - . ID=g11076.t1.utr5p1;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . exon 1169 1432 . - . ID=g11076.t1.exon1;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . CDS 1169 1387 . - 0 ID=cds.g11076.t1;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . exon 818 930 . - . ID=g11076.t1.exon2;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . CDS 818 930 . - 0 ID=cds.g11076.t1;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . exon 441 505 . - . ID=g11076.t1.exon3;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . CDS 441 505 . - 1 ID=cds.g11076.t1;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . exon 155 228 . - . ID=g11076.t1.exon4;Parent=g11076.t1 NODE_2823_length_5051_cov_72.9381 . CDS 155 228 . - 2 ID=cds.g11076.t1;Parent=g11076.t1;3_prime_partial=true #PROT g11076.t1 g11076 MRGIPLARASQRAYRASAGTVSAPWACVAVAGGNSGRPSALASARSYHRVNAGNLLVPTVREMPADAVSESHKLMLKAGLIRSSASGIYSLLPLGLRSLEKIEKIIDEEMGAIGGMKVALPLLAPASLWKTVGRWDSTGQELFRLKDRKDTSFCLAP # PASA_UPDATE: g11077.t1, single gene model update, valid-1, status:[pasa:asmbl_5080,status:3], valid-1 NODE_2823_length_5051_cov_72.9381 . gene 1680 4493 . + . ID=g11077;Name=g11077.t1 NODE_2823_length_5051_cov_72.9381 . mRNA 1680 4493 . + . ID=g11077.t1;Parent=g11077;Name=g11077.t1 NODE_2823_length_5051_cov_72.9381 . five_prime_UTR 1680 1809 . + . ID=g11077.t1.utr5p1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 1680 2182 . + . ID=g11077.t1.exon1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 1810 2182 . + 0 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 2295 2457 . + . ID=g11077.t1.exon2;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 2295 2457 . + 2 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 2747 2939 . + . ID=g11077.t1.exon3;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 2747 2939 . + 1 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 3302 3478 . + . ID=g11077.t1.exon4;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 3302 3478 . + 0 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 3737 3901 . + . ID=g11077.t1.exon5;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 3737 3901 . + 0 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . exon 4146 4493 . + . ID=g11077.t1.exon6;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . CDS 4146 4310 . + 0 ID=cds.g11077.t1;Parent=g11077.t1 NODE_2823_length_5051_cov_72.9381 . three_prime_UTR 4311 4493 . + . ID=g11077.t1.utr3p1;Parent=g11077.t1 #PROT g11077.t1 g11077 MGTLQMSCAQFARFSRAAHQSTFHGRHHARLLPRSALVVKSERGRFPPLVSGLSTCVRGYAQSAAAELYGIQAPASPASTITANQINMSDIPTVPKAHPIPKELLEKLKDFVFSSKRLVVMTGAGISTESGIPDYRSPGVGLYDRANHKPITYMEFTRDHARRRRYWARSYIGYLTLNKSQPNATHNVLAQLELSGRMRCLITQNVDSLHVAAGSTRLIQLHGNITQVHCLGCGHHMSREAMQILLHRVNDKWSAGTDAIAPDGDAQLGTETDYCSFNIPPCPQCCQHDLPAATKPHGSVQESGVVVMPKVDVSGMLKPNLVFFGENVPRPRVDAAHAAIADSDGVLVLGSSLHVYSGYRFVKQAHELGKPIAIVNVGPTRADPLASLRLDGLCGEASAALFKDDRLWARP* # ORIGINAL: g4697.t1 original gene structure, not modified by PASA NODE_2681_length_5466_cov_35.5656 AUGUSTUS gene 38 3697 . + . ID=g4697;Name=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS mRNA 38 3697 . + . ID=g4697.t1;Parent=g4697;Name=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 38 156 . + . ID=g4697.t1.exon1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 38 156 . + 2 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 574 660 . + . ID=g4697.t1.exon2;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 574 660 . + 0 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 1184 1451 . + . ID=g4697.t1.exon3;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 1184 1451 . + 0 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 1702 1854 . + . ID=g4697.t1.exon4;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 1702 1854 . + 2 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 2064 2238 . + . ID=g4697.t1.exon5;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 2064 2238 . + 2 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 2550 2688 . + . ID=g4697.t1.exon6;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 2550 2688 . + 1 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 3217 3325 . + . ID=g4697.t1.exon7;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 3217 3325 . + 0 ID=cds.g4697.t1;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS exon 3561 3697 . + . ID=g4697.t1.exon8;Parent=g4697.t1 NODE_2681_length_5466_cov_35.5656 AUGUSTUS CDS 3561 3697 . + 2 ID=cds.g4697.t1;Parent=g4697.t1 #PROT g4697.t1 g4697 LAFSSGLGATTTVCHMLNAGDHILCMNDVYGGTNRLFSKVIKNNGIETSFVDASDLTALEAAIKPNTKLVWLETPTNPTLRLVDISGAAEVVHRHAGIILVVDNTFMSPFFQKPLTLGADVVMHSVTKYLNGHSDAVMGVLMTNSDDIHTRLRFLQNAIGAVPSPFDCYLAHRGVKTLHVRMRQHQENAFAVAKFLEASPKVDRVYYPGLPSHPQHELAKRQTSGFGGMVTFSIKGDIEAAKRFLETVKIFTLAESLGAVESLCELPSIMTHASVSKEQRDALGITDSLVRLSVGLEDEADLIADLTQALAAAVPDVVVAPASPAKQPAGREAAGLTSAQSHRDDPVHTGNRDRHMNRKMHETSFAFGDGSDNPAPAPSTRITRPPGGKSSIIF* # PASA_UPDATE: g4698.t1, single gene model update, valid-1, status:[pasa:asmbl_4791,status:12], valid-1 NODE_2681_length_5466_cov_35.5656 . gene 4030 4929 . - . ID=g4698;Name=g4698.t1 NODE_2681_length_5466_cov_35.5656 . mRNA 4030 4929 . - . ID=g4698.t1;Parent=g4698;Name=g4698.t1 NODE_2681_length_5466_cov_35.5656 . five_prime_UTR 4894 4929 . - . ID=g4698.t1.utr5p1;Parent=g4698.t1 NODE_2681_length_5466_cov_35.5656 . exon 4837 4929 . - . ID=g4698.t1.exon1;Parent=g4698.t1 NODE_2681_length_5466_cov_35.5656 . CDS 4837 4893 . - 0 ID=cds.g4698.t1;Parent=g4698.t1 NODE_2681_length_5466_cov_35.5656 . exon 4030 4571 . - . ID=g4698.t1.exon2;Parent=g4698.t1 NODE_2681_length_5466_cov_35.5656 . CDS 4092 4571 . - 0 ID=cds.g4698.t1;Parent=g4698.t1 NODE_2681_length_5466_cov_35.5656 . three_prime_UTR 4030 4091 . - . ID=g4698.t1.utr3p1;Parent=g4698.t1 #PROT g4698.t1 g4698 MLRQRLVDVEKTVSAKDVEVSKVLSELEKVRSLGLLCFDFVPDADGSIDHEHVVSMIGDAVNANIPPELSSHVMPRETVEALATAAQQAVVHMQEQIVLQNQTNAQQQSAHLSTHNLSKLSSMSTPGLHKAGSSVSGGGPISKTHSMTGSARDKDGHTRDAHPKEGHGKEGHAKEGHK* # ORIGINAL: g2300.t1 original gene structure, not modified by PASA NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS gene 183 3459 . - . ID=g2300;Name=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS mRNA 183 3459 . - . ID=g2300.t1;Parent=g2300;Name=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 2449 3459 . - . ID=g2300.t1.exon1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 2449 3459 . - 0 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 1811 2258 . - . ID=g2300.t1.exon2;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 1811 2258 . - 0 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 1510 1647 . - . ID=g2300.t1.exon3;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 1510 1647 . - 2 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 1012 1153 . - . ID=g2300.t1.exon4;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 1012 1153 . - 2 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 781 887 . - . ID=g2300.t1.exon5;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 781 887 . - 1 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 553 693 . - . ID=g2300.t1.exon6;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 553 693 . - 2 ID=cds.g2300.t1;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS exon 183 443 . - . ID=g2300.t1.exon7;Parent=g2300.t1 NODE_3270_length_3866_cov_23.5479_potentialcontaminant AUGUSTUS CDS 183 443 . - 2 ID=cds.g2300.t1;Parent=g2300.t1 #PROT g2300.t1 g2300 MGPFRFLFVFVIAALSIGSSMAQVNCNPFGAAGPLCPSLNRGACRVPNVCGPCLSSYGVQGDPLNSTSDSNVACTKYTITYSVKMAISSANGAGTNLTCALALLGNRLSDSSVLSLADPKTGAISAGYSNTFTIQSSFLAFETVRGIRITCTGPSNSWLPLYFEVSGYDGAVGNTPIRFPFAISDRLDTGITNIFAAPPPGTPVNGKINCTTSLPGKTCPIVCNSGYAPAGGNGAGNVTLPSGTTLPFSTASIDSAVCRLDCSTHSNFYCASLNRKPCSTTGTCGPCMYGLDTASRNGLIDGDTACAQFANYDVKIFTGTKGFGGPFYMTILGDLGSTEEILVTAKGFAASSTFRGTFYGKYIGTNFLTVQFRFVGLSSTYYDYWNGGHILLSYDTDDYWRFDGFPPSTAIKSDTTYTACDLPPDPLNGSFACDSTLTTATGCSVTCNTPTFTATPLASRVFTCRSDGSYRDSSLNALNSSLPFCKISNPCTVNGGGCGVNSICTNPSPTVAKCMCANTSFYSPTADGKNCASVAGCTNCVGNSNCSSTLGRCVCYTGYVSDLNEGRNCRLATECDTNKGICGTYSTCAPGTGGKAVCTCFTGYNSTFTNNTNCAPTNNCLKNNGGCGLNTTSLCTMTGPGLSSCQCLDGFISPSGTQRDCRAITMCEKNSTYCGENTVCENVDATSLKCSCTPGTIVVSPTRCRLRTPCDTANICGQNSTCEAIDTTKYSCKCILDYISDFKNGSFCR # ORIGINAL: g2194.t1 original gene structure, not modified by PASA NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS gene 1 2317 . - . ID=g2194;Name=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS mRNA 1 2317 . - . ID=g2194.t1;Parent=g2194;Name=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS exon 1120 2317 . - . ID=g2194.t1.exon1;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS CDS 1120 2317 . - 0 ID=cds.g2194.t1;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS exon 781 797 . - . ID=g2194.t1.exon2;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS CDS 781 797 . - 2 ID=cds.g2194.t1;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS exon 354 505 . - . ID=g2194.t1.exon3;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS CDS 354 505 . - 0 ID=cds.g2194.t1;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS exon 1 184 . - . ID=g2194.t1.exon4;Parent=g2194.t1 NODE_3700_length_2927_cov_43.3394_potentialcontaminant AUGUSTUS CDS 1 184 . - 1 ID=cds.g2194.t1;Parent=g2194.t1 #PROT g2194.t1 g2194 MANALKSSKPLGSVGLKTDAGIRRYITWWSCLSIVIIVTAGIVLPIIVYNESLSIEQDTLSYRFDEIAGAELSNILGVMTQTIHAIQNMRIPLQLAGENLANAQYLDAAELLARPTSLATLVWNPLVRNENRDAFEQRIRALNNGSADYANFAIVESVTNISVLTPEQVLTLRKASVRPTYLPYTYSWVTPTILFNKTNRIGNDLFTTAAFGNLSESFYTGEPLINTKVTNPFDPRKKGLYISTPVFTSVKTPNTVSERLASAVGILTATMGMAAIVTEARAYNKSMHMYLFDESKRQILYADAGLPEVASAADISSVEGARFERTLAIANRNFVVVGIPTDRLVDETLSVGPRVFSTVTAVAFFLLLVAAAFAIRKIVRTEEEMAVSEKRRHLVNQMIGYVNHEIRNPLNGIVGLVDHATETTRDCLRASTPDKESIRAIAVDLKDTNNMCELMRHIIDDILDIRCLDEGRLKIITGPISLGRLLNDAVAIIQMKLTEKPSLSLSVEAFDMGAVIV # ORIGINAL: g5779.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 23973 29114 . + . ID=g5779;Name=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 23973 29114 . + . ID=g5779.t1;Parent=g5779;Name=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 23973 24092 . + . ID=g5779.t1.exon1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 23973 24092 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 24275 24913 . + . ID=g5779.t1.exon2;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 24275 24913 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 25064 25273 . + . ID=g5779.t1.exon3;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 25064 25273 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 25588 25665 . + . ID=g5779.t1.exon4;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 25588 25665 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 25869 27041 . + . ID=g5779.t1.exon5;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 25869 27041 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 27241 28551 . + . ID=g5779.t1.exon6;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 27241 28551 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 28689 28793 . + . ID=g5779.t1.exon7;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 28689 28793 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 28944 29114 . + . ID=g5779.t1.exon8;Parent=g5779.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 28944 29114 . + 0 ID=cds.g5779.t1;Parent=g5779.t1 #PROT g5779.t1 g5779 MVSHPMDFSDDGALDALRSDAELAVDKENASQDGGDHNDEAFSAVANATLKAPLKASPAGIPRPVRRAGAANEQPNAEAPSSKWKKPTTPKNPSRMTAHAPARSPLTPRAGAQGPTPGGAVPPRKNAPVPKDYAADIRKMRSAMSQEDVSLGAHVSGQKSSQAGAEDDACKGCVGLHERLRATEARCARQALMIHKMEVDLTNATADIAQFEAEYEKIRTEGADLYKSYEARCKSLRSLVQAQQVAQETIAEKDRSIASLTAECKRHQESAQMWKEKCRTQASDFRGNFASFKTLSDEHGLLKKAHDELREALEKAECQAEEERLSRIALESESADWESERTIFENTIRSLSAELEALRAAAPESTPVISSVPDHAIVEIDESPEEDADEATVPAHSETNYRGVAQSLVQTMILSALARYPPATPTHAETKSRSTPTSPSPSLLRSARSPALTSPRRTAWPHPDHASDADAAADVAMAFSDSPLAVISRGRDAHDAPSAITRTVTFAHSSPSASSPSPAARKVAQLEMELREAEGCYAQAMIGWARAKVEIECLRKRLGNSDNLEDGEDEGSCRNDELAEMESCDASLNLSSISEADEASFEEVHSPASADVLFPDAASHADSHSPSIGNGRVSFGDSGSPFVVEYAHTNDGPLPRPGCADSTSPVSLASTGSRDDGCDTRAQLRAECEALSSELADARIALETARVEGARDIADLEDRLRLCECDCLAKSHEVASLKAMMSAQENEIATHTSDVAVLEEARDSLEKQNDALRDAEAEYVGRISHLKMEWDERGRVVVSLQAECESLAQAIKAGGFRADKLESELMAQAYVRAELEGKVSVLEAELSARTAELERTTGAMESALAAMGDTDAALRAELAVASQALAGAEGRAAGLDEKVTWMRESQSALEETARKLESEKFELESLVGKLQSAESTLIAECTRLSHEADEARRQRDELGDFVEEERQVRAEIEADLERSLADAHAQCDAAAAEKASLAAALAKQADDYAANVDAVRCEMSIKLADAEQKLEDALSKACGADCARNRRQVADAASRIEAAEARVRLVEEGIVRGLRRDLDARDAEVAELRTASASTEASLERALGCLDDLERRYEARERDVVQPMSGELREMRARLRGSEKDRQALADKLDAMIGMTDGARRESYARFVVEKTVLEGEIAELKARLATLLPLEGEVAQMRKYIRDLTERADKKIAILQDNLRKAEDEVESLDTLLDAVRSAFEANRTSIARLPALAAVYVQIGECGGEE* # ORIGINAL: g5772.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 1832 6529 . - . ID=g5772;Name=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 1832 6529 . - . ID=g5772.t1;Parent=g5772;Name=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 3759 6529 . - . ID=g5772.t1.exon1;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 3759 6529 . - 0 ID=cds.g5772.t1;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 3519 3603 . - . ID=g5772.t1.exon2;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 3519 3603 . - 1 ID=cds.g5772.t1;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 3264 3359 . - . ID=g5772.t1.exon3;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 3264 3359 . - 0 ID=cds.g5772.t1;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 1832 2977 . - . ID=g5772.t1.exon4;Parent=g5772.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 1832 2977 . - 0 ID=cds.g5772.t1;Parent=g5772.t1 #PROT g5772.t1 g5772 MNGRASPAPAYVRSGVAEINADQEALLEDLFRSCLHHDSDDTASVPSIIDYLRSLPDGAALPEHELVSLRKMLDPDGHGVVAFDTYRKRMVSWIALQAGIYDATPRTPLSGTPSGSPDRPKTGASRVASFHSPVTATVYSSSPPASHRDLPTSTKRANLSSHGGASITGAAVSPGVPGRGLALDDLGEYANCFTPGTAGGRGANGRGRGVYAAGSSHATPSGTGFRGSPSDRGAAADFEAHLRKFRQENTQLNSEMQKQYEENARLASECEKLRREVRVERQARESVQQLRRENDELRTQLNAASTENKSLADTLRRRETDGLTVVDRERRMADQGLELVNLEARLAEASERAAENDVLRARLEAALTEADAARAEADEATADTGRLAKMVMTLNQKIEELHARLHEKEAAEQFSRSIGGDVDLRISDVVEEITRRENDGVTAALSVVDEISRDEEHMSFLEESAFANEGMLREVQERNRELQGAIERMTTERDAAQAKLRDFTRMQQELADSEKEAADLRREVTSLRVHSHELTIAHEQLRTLTAETHRQNARISGLDLEREHARAELDAARADSSALRRRLDESGSIVARLTQDAHELRQELHAASARSSQLAIATERLQTLERQQSSIAQSPSKSPLMKEVGDLRDELATRSRETARLEREVEALRVLEKDAGSLRAAVEGLRAENTSHVRYIAELEARLADAEHRAREAAVAADRAREHAATLTTASSDLAAAHAHEQDLLRQLSERHATSEALLSNAEDTIKRRDAEVEALSAEVQGLMRQLEAVQRDLRSTRDQLAGEMGLARAMEIEREARASSEAEARALRQQLAHAEDGQRQLAESQREAEDQKREAQRLSREATNLKQTVEDLQMELASVRESLRQSTIDAHASTEAVFGADADVAALQADLGDKQRKVLELSSQCELLKRSVDDYRRRALMEEEQSQALKESHDALVSRLKVKMEYLERETEAHERALAEKDVELSDAQASAASNEAALQSMQNECDAMRAAADQARDDLQASLARADQLDADLQSAIGRIEDLNAREKELTTELHELQPSRPTSTVPLSPGAFFAEDDALVRKMDYVRAELQKGISFFVAHEEEGGQKSIALDVLTHAFDAVNGVASQVFLQTRERSRVGQAAIARRVDTLVGQNCELETKLHETEAQAKRAIAERETLRGKLNDMNAHAAFTARSLVSVVRNLQESVVAPSVDRRRSAEQRLATVLDVVRVSCEDAVGKLAWDPSESPAAAEELGHGVYREGYYAGMRARVWGDLESLRQRLGTCEASLAVRVDGAGAAGAWRRGQAGRWLLPVLVLWLVAAVLAAVGAWAGENVDACHAPGTPLHFFFTRIVSLVDRPAVM* # PASA_UPDATE: g5774.t1, single gene model update, valid-1, status:[pasa:asmbl_7866,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 10479 11944 . + . ID=g5774;Name=g5774.t1 NODE_50_length_49644_cov_43.363 . mRNA 10479 11944 . + . ID=g5774.t1;Parent=g5774;Name=g5774.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 10479 10526 . + . ID=g5774.t1.utr5p1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . exon 10479 10666 . + . ID=g5774.t1.exon1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . CDS 10527 10666 . + 0 ID=cds.g5774.t1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . exon 11026 11153 . + . ID=g5774.t1.exon2;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . CDS 11026 11153 . + 1 ID=cds.g5774.t1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . exon 11309 11331 . + . ID=g5774.t1.exon3;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . CDS 11309 11331 . + 2 ID=cds.g5774.t1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . exon 11490 11563 . + . ID=g5774.t1.exon4;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . CDS 11490 11563 . + 0 ID=cds.g5774.t1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . exon 11701 11944 . + . ID=g5774.t1.exon5;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . CDS 11701 11755 . + 1 ID=cds.g5774.t1;Parent=g5774.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 11756 11944 . + . ID=g5774.t1.utr3p1;Parent=g5774.t1 #PROT g5774.t1 g5774 MNALRTFARTTLARPLLATQQASLFHASATTMGVTVETITPGDGKSFPKRGDTVTVHYTGTLTNGNKFDSSRDRNKPFVFELGLGRVIKGWDEGVAQMSVGQRAKLTCTPDYAYGANGFPPVIPANSTLIFDVELIKFQ* # ORIGINAL: g5784.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 42861 44501 . + . ID=g5784;Name=g5784.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 42861 44501 . + . ID=g5784.t1;Parent=g5784;Name=g5784.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 42861 44501 . + . ID=g5784.t1.exon1;Parent=g5784.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 42861 44501 . + 0 ID=cds.g5784.t1;Parent=g5784.t1 #PROT g5784.t1 g5784 MGPCDAADVRDSSGTSLPVGGGMNAVSGSVNSGNPPVHRARSVGGLTTWEYSEDSPVDTSRRTFILLAWFCLLGGLVYGYNLSLGGVLDALAEDYGIKDDDVKQALIQSAPVAGGLVFSPFCGWFADRYGRLRATVISCCIASVAAGVQVIGSSLPYILVVRFFLGVGVTTSCFVVPLYVCECAPPEKRGSLVALFQLSINIGFSLAFGVDLLVPWRVAVAVGCVPGIALIAINLLYVPESTRWLLERDVRGRLSKVHGLPSGGVSTDAVPLFDPAATSPEYAHPSPSKNEAENQYAPHAVGLVGYMLGFVLAILNNGIGGIILYGPQIAEEAGFGTHAGTIASVGIGGFCIVTVIIGIVIVDRVRRRPLLLLTVLIMVVTHGVLAAGLAWAHSWLKTVIVLVSTVVLVSAFQIGPGPLYFVIIAEIYPQSVRGWAMGVSMITVNAFNLVVSLTFLPSIHKLGTPVTLLYYAGLYTLCILFCALYLPETKDVDLDAVTGDARTVPQQQRILPTDAMAHGEIGRVSVLDAEVTEKTALLGGSRQTLE* # PASA_UPDATE: g5775.t1, single gene model update, valid-1, status:[pasa:asmbl_7854,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 11398 15263 . - . ID=g5775;Name=g5775.t1 NODE_50_length_49644_cov_43.363 . mRNA 11398 15263 . - . ID=g5775.t1;Parent=g5775;Name=g5775.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 15046 15263 . - . ID=g5775.t1.utr5p1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 14434 15263 . - . ID=g5775.t1.exon1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 14434 15045 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 14078 14257 . - . ID=g5775.t1.exon2;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 14078 14257 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 13742 13947 . - . ID=g5775.t1.exon3;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 13742 13947 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 13507 13589 . - . ID=g5775.t1.exon4;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 13507 13589 . - 1 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 13264 13348 . - . ID=g5775.t1.exon5;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 13264 13348 . - 2 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 13097 13172 . - . ID=g5775.t1.exon6;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 13097 13172 . - 1 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 12922 13005 . - . ID=g5775.t1.exon7;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 12922 13005 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 12565 12690 . - . ID=g5775.t1.exon8;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 12565 12690 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 12312 12392 . - . ID=g5775.t1.exon9;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 12312 12392 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . exon 11398 12194 . - . ID=g5775.t1.exon10;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . CDS 12057 12194 . - 0 ID=cds.g5775.t1;Parent=g5775.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 11398 12056 . - . ID=g5775.t1.utr3p1;Parent=g5775.t1 #PROT g5775.t1 g5775 MHGRALISSADDGRRGSASNGTVLSANNASAQGAVGGARGKRHITLPEGRAILEDGGGFMPTVAGRAAASRAFPLKLSFFTVNVHVSGDVAAATAGGASSNSSQSSATLSSELGIERMRSTSSSSSSLVSLSSSEGRRAGSNCVANGGAGGVASGPSGSGWRSGAGTPVKGDVVPKAHACAEGGYVAFNFGHTVRCFPYACNGKGINRRNPLDQLAFEEATPTCVDVNLMTRSPTNVDSAIGLSTGEIVLRNMVTKATRRLNKDGTVTASSPTCIRWVPGSDGLFVVACADGALYVYDADRDRNDLQPLPLPSAPPLGNASISAGEHRSPTDGLTVVHAKGPRLNPLARWHFGTAVGAVSEIAFSPDCKHLAIASKDGKLRVCDFVEERVVQCFKSYFGGLNCVAWSPDGKFILTGGEDDLVSVWSFEEARLLMRCQGHMSWVSAVAFDPYTSDHSTYRFGSAGQDTRLLVWEFTRASISRPRLSSLLDENELATPPSRALDAVPLIAPIVNQCIHSEPLTALAFRSDAIVTGCHGGEVRVWARPTVTHADAPALE* # PASA_UPDATE: g5773.t1, single gene model update, valid-1, status:[pasa:asmbl_7864,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 8026 10194 . + . ID=g5773;Name=g5773.t1 NODE_50_length_49644_cov_43.363 . mRNA 8026 10194 . + . ID=g5773.t1;Parent=g5773;Name=g5773.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 8026 8240 . + . ID=g5773.t1.utr5p1;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . exon 8026 9238 . + . ID=g5773.t1.exon1;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . CDS 8241 9238 . + 0 ID=cds.g5773.t1;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . exon 9355 9474 . + . ID=g5773.t1.exon2;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . CDS 9355 9474 . + 1 ID=cds.g5773.t1;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . exon 9565 10194 . + . ID=g5773.t1.exon3;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . CDS 9565 10000 . + 1 ID=cds.g5773.t1;Parent=g5773.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 10001 10194 . + . ID=g5773.t1.utr3p1;Parent=g5773.t1 #PROT g5773.t1 g5773 MASAADVNTQKRQNESPTEVVKRARIEHEVNDLSDDKKLSSVLVEAALSECIRRKQPSNAKASPRAPKKGRAASRRDMNNDNASRKSGSVISRHELRMDRHELAMPQDVLQFVHLPPCRLWHKDRTSFDLAGLLAAVSLHQTSNYYRQVDLNTAFCITDCRLPDNPIVYVSTTFERLTGYKETFILGKNCRFLQGPNTDRRIVDRMCEMVKKNEECHFEVTNYRADGRPFLNYLSIMPVRLGPKQEVVFFVGVQSDTPPVGVGTWAPWMPEGQRPFAQSQSQHQHQHQHQHQHSLQRPQAHYPQDAGRSALIPAPAHISAPPMSWDPMIALPHMQAARGYFPQSTYLPFRTQRSTEVLTRFQAPQYQHQAPPMMNQFVVGRTDSQSALQGPPSPPSSGSMRTAEAAAVSDAQLHGDHNAPPRDPLLHVDVAASAPLRCALAYEKRPDAWSVEDVCQWVDSLLLPQYKGSIRTNAIDGNLLLSLSEEELQNDVGVVNNLHRKKIVQSIAMLRKFLGLS* # PASA_UPDATE: g5776.t1, single gene model update, valid-1, status:[pasa:asmbl_7867,status:12], valid-1 NODE_50_length_49644_cov_43.363 . gene 15792 18926 . + . ID=g5776;Name=g5776.t1 NODE_50_length_49644_cov_43.363 . mRNA 15792 18926 . + . ID=g5776.t1;Parent=g5776;Name=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 15792 16943 . + . ID=g5776.t1.exon1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 15792 16943 . + 0 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 17136 17268 . + . ID=g5776.t1.exon2;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 17136 17268 . + 0 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 17423 17679 . + . ID=g5776.t1.exon3;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 17423 17679 . + 2 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 17796 17907 . + . ID=g5776.t1.exon4;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 17796 17907 . + 0 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 18097 18339 . + . ID=g5776.t1.exon5;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 18097 18339 . + 2 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . exon 18464 18926 . + . ID=g5776.t1.exon6;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . CDS 18464 18615 . + 2 ID=cds.g5776.t1;Parent=g5776.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 18616 18926 . + . ID=g5776.t1.utr3p1;Parent=g5776.t1 #PROT g5776.t1 g5776 MLSFALGVLLGALAVVALEALAVRRLRFLRSCDRDGDARASHLEPHARVKPAYPAPVIRFVRVGQDSRRESCGWLNELLCKIFFDFVGKESIQEAAVRGLNNFISEAKQQRNSKAVGNLKVTEFSVGQSLPVIKDATLLRMTSEDDDVHVLLDVYYDAGDSPPKIAIETEIAFGLNVALSVAVVEIVGQLHFVMQRNGQMHLAFSEDPDILFDIKFRAGGFVSPKVANFISRKIKTIIRQKIVEPQRLTFSLHGDRQPRRLPKLRVTVLNGEGLAAKDPNGLSDPYFIARIGEARYRSRFIPKTLDPVWNETHVFDVPQDVDCLVIEVYDHDFVGEDDFLGIATLALDGIDSGGIVCRTLTLLPRMPGEDVQGAITVELLFEGKVDDEDDGEGASKSAADGESSPSRPRATVPMPRPKLPDDSLPPMTGGLGMSASPSMNSISGLSVGGGGHQRGPSFGQGLLRKMRGEHYSAEDALKFLANVRLQLSTEMERLVEANERYLTRASYDDSGQQAPLAGTRTRIEQLRKEEGDLVDHLCTLGWQRAEIDNACEASSTDAPTSTASEFGDDLVSVDGGVPADASGVRAARERRAARPFTGNAHSFRAFNYSKPTYCEHCFKFLWGLKNQGMRCTVCTLDCHRKCSKQVAATCTVGSQLLATAVSAGHGSTGSGARGESQPINHE* # ORIGINAL: g5783.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 41144 42166 . - . ID=g5783;Name=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 41144 42166 . - . ID=g5783.t1;Parent=g5783;Name=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 42070 42166 . - . ID=g5783.t1.exon1;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 42070 42166 . - 0 ID=cds.g5783.t1;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 41782 41966 . - . ID=g5783.t1.exon2;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 41782 41966 . - 2 ID=cds.g5783.t1;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 41507 41623 . - . ID=g5783.t1.exon3;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 41507 41623 . - 0 ID=cds.g5783.t1;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 41374 41404 . - . ID=g5783.t1.exon4;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 41374 41404 . - 0 ID=cds.g5783.t1;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 41144 41253 . - . ID=g5783.t1.exon5;Parent=g5783.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 41144 41253 . - 2 ID=cds.g5783.t1;Parent=g5783.t1 #PROT g5783.t1 g5783 MIKLFSLKQQKKDAGSTPGAKKTSAAQLRIQKDVSDLNVPSTCKIDFPDPDDLLNFQLTIVPDEGFYKGGTFLFSFAVGQGYPHEPPKVKCLTKVYHPNIDLDGNVCLNILREDWKPVLNINSVIYGLQYLFLEPNPDDPLNKEAAEVLRSNRKNFEQNVYRSMRGGMVGNDYFDQCIK* # ORIGINAL: g5771.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 517 1461 . - . ID=g5771;Name=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 517 1461 . - . ID=g5771.t1;Parent=g5771;Name=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 1429 1461 . - . ID=g5771.t1.exon1;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 1429 1461 . - 0 ID=cds.g5771.t1;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 1254 1334 . - . ID=g5771.t1.exon2;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 1254 1334 . - 0 ID=cds.g5771.t1;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 966 1109 . - . ID=g5771.t1.exon3;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 966 1109 . - 0 ID=cds.g5771.t1;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 707 787 . - . ID=g5771.t1.exon4;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 707 787 . - 0 ID=cds.g5771.t1;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 517 567 . - . ID=g5771.t1.exon5;Parent=g5771.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 517 567 . - 0 ID=cds.g5771.t1;Parent=g5771.t1 #PROT g5771.t1 g5771 MEDAFAQVEVLFERLDSELNVVTRRLEVDLMERAEDPLTHTRYRAFASNLAMQTPNAVRLVQRLRTLTESTALLSKEALEIAERRAEVAAACKTLLLGNAAIIGRLAQATSLQVDEQEARACLKAVDTL* # PASA_UPDATE: g5785.t1, single gene model update, valid-1, status:[pasa:asmbl_7859,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 44894 49458 . - . ID=g5785;Name=g5785.t1 NODE_50_length_49644_cov_43.363 . mRNA 44894 49458 . - . ID=g5785.t1;Parent=g5785;Name=g5785.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 49038 49458 . - . ID=g5785.t1.utr5p1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 48648 48658 . - . ID=g5785.t1.utr5p2;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 49038 49458 . - . ID=g5785.t1.exon1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 48336 48658 . - . ID=g5785.t1.exon2;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 48336 48647 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 47991 48096 . - . ID=g5785.t1.exon3;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 47991 48096 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 47118 47746 . - . ID=g5785.t1.exon4;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 47118 47746 . - 2 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 46720 46878 . - . ID=g5785.t1.exon5;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 46720 46878 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 46328 46582 . - . ID=g5785.t1.exon6;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 46328 46582 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 46059 46158 . - . ID=g5785.t1.exon7;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 46059 46158 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 45751 45911 . - . ID=g5785.t1.exon8;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 45751 45911 . - 2 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . exon 44894 45387 . - . ID=g5785.t1.exon9;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . CDS 44914 45387 . - 0 ID=cds.g5785.t1;Parent=g5785.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 44894 44913 . - . ID=g5785.t1.utr3p1;Parent=g5785.t1 #PROT g5785.t1 g5785 MGAKQTDDAVRAFTRATAAKDATAQTFVALGKALYLHGNVSGAADAFQGAIERLGRVGRERAEASVFLGVTLNELRRKQEALDAYRAAISADEDNALAHNNAAQVLIDLSRTDEAYEHAVAATRNDPRMAIAWINRAITAKPTDEGIKDSLESFRHALELDSTNEFANCRLADLRRRVCDWTHQKDDVLWLSASAARYADLPAEDGGNNPTRVQPLCHAPFVFEYFALDPQLLMRTAVHYAGAEQAGAAVLARQLASSEHRATFREKGGGWHPMVKVGFVSADFRNHPTAHMMLRVVKAMVRQVKEALVADEDDDALFVVPALYYVGTQLDEWTQKFVQLARSSETWLEGVPLLDVRLLGGFSMHTVASLVNDDGIEVLVDLMGYTDGSPMTLFAARAAPVQVSYLGYCGTTGAPYMDYVVCDHISCPDEQRAQMTERIAYLPHSYHLCPHPCEASDLAPDHTADDSNPRAFLGVTADAFMYCSLNNADKIEPGIFSLWMAILSRVPGSFLWIPTKTKLAEENLRREARARGVDGRIVFTRPLRRDRFLVEAPAACNVFLDTHFVNAHTTAAEMLPRGLPMLIWSGPSRCGRISASIFQSLLSPTHPHTDLASNVTGAVLPNSFMEGVDFDSASGDDAVAFGVHDLVVSSAEEYVRRGVQLGLGGTGPSSLSGRLSATLKEAAAHRESSIVDAEVYAHNLSRLFKELARRHREGLEPVDVDLWQSRDSDKE* # PASA_UPDATE: g5780.t1, single gene model update, valid-1, status:[pasa:asmbl_7855,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 29493 34390 . - . ID=g5780;Name=g5780.t1 NODE_50_length_49644_cov_43.363 . mRNA 29493 34390 . - . ID=g5780.t1;Parent=g5780;Name=g5780.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 34368 34390 . - . ID=g5780.t1.utr5p1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 34361 34390 . - . ID=g5780.t1.exon1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 34361 34367 . - 0 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 34013 34171 . - . ID=g5780.t1.exon2;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 34013 34171 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 33518 33824 . - . ID=g5780.t1.exon3;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 33518 33824 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 33028 33341 . - . ID=g5780.t1.exon4;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 33028 33341 . - 1 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 32617 32781 . - . ID=g5780.t1.exon5;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 32617 32781 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 32210 32409 . - . ID=g5780.t1.exon6;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 32210 32409 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 31881 32010 . - . ID=g5780.t1.exon7;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 31881 32010 . - 0 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 31506 31624 . - . ID=g5780.t1.exon8;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 31506 31624 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 31145 31267 . - . ID=g5780.t1.exon9;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 31145 31267 . - 0 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 30853 30965 . - . ID=g5780.t1.exon10;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 30853 30965 . - 0 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 30589 30650 . - . ID=g5780.t1.exon11;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 30589 30650 . - 1 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 30147 30314 . - . ID=g5780.t1.exon12;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 30147 30314 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 29816 30000 . - . ID=g5780.t1.exon13;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 29816 30000 . - 2 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . exon 29493 29561 . - . ID=g5780.t1.exon14;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . CDS 29526 29561 . - 0 ID=cds.g5780.t1;Parent=g5780.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 29493 29525 . - . ID=g5780.t1.utr3p1;Parent=g5780.t1 #PROT g5780.t1 g5780 MSGRGGGRGAYYKAKYGGGNSRRMREARDGEGDAHPVDRQGNSSGYSYAHTNAQSPGGFTQQRNDVGHAPYRALARAVSTSLRTSADLGTCLREIDGDGYGSYRRIEGEWAFGDTNSGFVLTVDHVQGDPYAPPTRCRVRVSFQAAGFTPDVCAPKIRNIALCDFLTRRFAMLVSSGDMNVPANAGRSSWGGPKGGDIQIENPGQHVIERTSVVVSCESANLDAPPYVPRPQQPGSGNYACETAGTGDGYVEARFTVALPASGRTVEGRRAWHVIGELLPSVVRNALFHDRIDRRLLLAHIASVEDQAALRKQLAGRGLVAFVRDGAVLPRASGDSDIPLDGAGAVAFESPASLRTTFTLPSGVVVSGMGIPRGITLIVGGGFHGKSTLLRALEVGCYDHVAGDGREFVCADPTATKIRAEDGRGVHSVDVSAFINNLPRGRDTRAFSSTCASGSTSQAANTVEAIEAGARLLLIDEDTTATNFMIRDRRMQLLVSREKEPITPFLHKVRSLYADHGVSTIIVVGGSGDYFDVADTVLQFDEYRPRDVTEAARRIAASMPSGLGEAEEAFPGITRRIPVADSLQPPGDRSKVTAKDRHTISYGSTDIDLALVEQIVERAQTRAIGDALLYIRDRVADGRRTVADILALLDAAIDGSSLDILSRYPSGQYSRPRAIDVAAALNRLRTAHMRQAAAQ* # PASA_UPDATE: g5781.t1, single gene model update, valid-1, status:[pasa:asmbl_7856,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 34790 37229 . - . ID=g5781;Name=g5781.t1 NODE_50_length_49644_cov_43.363 . mRNA 34790 37229 . - . ID=g5781.t1;Parent=g5781;Name=g5781.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 36979 37229 . - . ID=g5781.t1.utr5p1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . exon 36807 37229 . - . ID=g5781.t1.exon1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . CDS 36807 36978 . - 0 ID=cds.g5781.t1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . exon 35975 36554 . - . ID=g5781.t1.exon2;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . CDS 35975 36554 . - 2 ID=cds.g5781.t1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . exon 35682 35730 . - . ID=g5781.t1.exon3;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . CDS 35682 35730 . - 1 ID=cds.g5781.t1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . exon 34790 35495 . - . ID=g5781.t1.exon4;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . CDS 35052 35495 . - 0 ID=cds.g5781.t1;Parent=g5781.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 34790 35051 . - . ID=g5781.t1.utr3p1;Parent=g5781.t1 #PROT g5781.t1 g5781 MPSSQAGEFDEYGESREANLVHGPFGDGGSGGKGKGRGRTSKGRAFGSRNFRPEEIQTLLAQVRAKRPNDNERWHVLGDSYNAIARASGWHTRPWESLRRKFGVLVLAKKSIDDPSCPADVVEAKRIHEEIKELGGELEDLEDHEDSGSWEGSSEPVDLRNADIVGDVHHGDHHGDHHGDHATEHHVADHGGVGVGVGVVGDGVGVGVGDQVAHGDVEGAATRKRPLPSDAPGAAGTPKRARAGREDDADGLRGSRGHRPLSAVLGEPYAGIRPIPGDTAALTQLLLRHCEQQRSDAREERRLLREEARLQREEARQSQLLMIQMLQQQQQQGQQFMAALLAGLVGGKTSGAGGEILAALGAAPGIAAAHADAVAHGHAHHHLVGDSHRDDTRDDRDPMERDGDDRDRTGAGQQ* # PASA_UPDATE: g5782.t1, single gene model update, valid-1, status:[pasa:asmbl_7857,status:3], valid-1 NODE_50_length_49644_cov_43.363 . gene 37737 40366 . - . ID=g5782;Name=g5782.t1 NODE_50_length_49644_cov_43.363 . mRNA 37737 40366 . - . ID=g5782.t1;Parent=g5782;Name=g5782.t1 NODE_50_length_49644_cov_43.363 . five_prime_UTR 40211 40366 . - . ID=g5782.t1.utr5p1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 40078 40366 . - . ID=g5782.t1.exon1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 40078 40210 . - 0 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 39732 39871 . - . ID=g5782.t1.exon2;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 39732 39871 . - 2 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 39353 39552 . - . ID=g5782.t1.exon3;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 39353 39552 . - 0 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 39098 39194 . - . ID=g5782.t1.exon4;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 39098 39194 . - 1 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 38650 38798 . - . ID=g5782.t1.exon5;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 38650 38798 . - 0 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . exon 37737 38341 . - . ID=g5782.t1.exon6;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . CDS 37789 38341 . - 1 ID=cds.g5782.t1;Parent=g5782.t1 NODE_50_length_49644_cov_43.363 . three_prime_UTR 37737 37788 . - . ID=g5782.t1.utr3p1;Parent=g5782.t1 #PROT g5782.t1 g5782 MAATALQTADEKREHFDSPEELERKMDVLAEWVRSSAHCIAFTGAGISTSAGIPDFRSGMGTVLSTGPGVWELRANGMRRPREARTKSSLNAIPTPTHMALVEMRRRGTLKYLVTQNTDGLHRRSGFPANRLSELHGNSNLEICERCGSEFLRDFHTRTANEVHAHYTGRHCADSACNGRLKDSIINFGESLPERALNRAFSHGRRADVCICLGSSLRVTPAAHVPVETARNGGKLVIVNLQQTPLDARADLVIHAFTDTVMQMLMVRLGQAIPPFVLERRCRVGFAMHPNNVDGEHMNGASRKSSEFIAWSVAVTGLEESGVPYSLFKRVEVEPRGSGGASIGTGVVTLPVEPFRLRMSTRRAPSSFVVRTHFHGHYGEPSLAIEHCVPGGLVDDGGEQSTEYVLKYDPATGSWSVSTVGVE* # ORIGINAL: g5777.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 19400 21716 . + . ID=g5777;Name=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 19400 21716 . + . ID=g5777.t1;Parent=g5777;Name=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 19400 19526 . + . ID=g5777.t1.exon1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 19400 19526 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 19807 19919 . + . ID=g5777.t1.exon2;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 19807 19919 . + 2 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 20041 20121 . + . ID=g5777.t1.exon3;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 20041 20121 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 20294 20416 . + . ID=g5777.t1.exon4;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 20294 20416 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 20625 20717 . + . ID=g5777.t1.exon5;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 20625 20717 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 20862 20924 . + . ID=g5777.t1.exon6;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 20862 20924 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 21028 21105 . + . ID=g5777.t1.exon7;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 21028 21105 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 21215 21349 . + . ID=g5777.t1.exon8;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 21215 21349 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 21516 21716 . + . ID=g5777.t1.exon9;Parent=g5777.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 21516 21716 . + 0 ID=cds.g5777.t1;Parent=g5777.t1 #PROT g5777.t1 g5777 MVETRNDFTEFCAKFDTLSDGILKELVAFGMPNDAIAWVRQVSKMNRGLSVLSSYRLLLGRELTEDETLKATVLGWSIEWLQAFFLVADDIMDGSKTRRGQPCWFRLEDVGMIAVNDSLLIEGTMYRILKKYFRNEKYYVDLLELLHEVTYQTELGQTLDLITAPEGKVNLDRFSLDRHIVKHKTAYYSFYLPVALAMLMAGYTAEKEFKGAEEILLEMGEFFQIQDDYLDCYGDPEVIGKIGTDIEDNKCGWLVVQALERCTPEQRAILEANYARKDPANVAAVKALYADLDLRRVYSDYEESSFVKLQAMINASTVTIPKEIFTDFARKIYKRQK* # ORIGINAL: g5778.t1 original gene structure, not modified by PASA NODE_50_length_49644_cov_43.363 AUGUSTUS gene 22166 23173 . - . ID=g5778;Name=g5778.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS mRNA 22166 23173 . - . ID=g5778.t1;Parent=g5778;Name=g5778.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS exon 22166 23173 . - . ID=g5778.t1.exon1;Parent=g5778.t1 NODE_50_length_49644_cov_43.363 AUGUSTUS CDS 22166 23173 . - 0 ID=cds.g5778.t1;Parent=g5778.t1 #PROT g5778.t1 g5778 MAFLDPHSLEHPTGSMQGFAALLYASASLFITFVNKIVLTSYGFPSFQVVALSQFVATVLVLEILKRLRYIDFPGVSTNVVQKVFPLPLIFFANAISGLGATKKINLPMFSALRRFSIFMTMVAEAWFLKKSSSVGVKVSVTIMIVGAFVAAYEDLTFDLVGYFYVTVNNVFTALNGVVMKKKLDAKDLGTSGLMYYNSLFSIPLLLLYIVAFEPDQLRLAMAYPLWSSTGFLINFGFAAIMGCVLQFSTFLCTKVNSALTTTVVGCLKNILTTYVGMFLGGDYVFSMVNFMGLNLSIFGSLMYSRVTYVESIQSRKANPPPSAAAGVLPTTAQR* # ORIGINAL: g4590.t1 original gene structure, not modified by PASA NODE_1507_length_10838_cov_57.542 AUGUSTUS gene 1405 3671 . + . ID=g4590;Name=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS mRNA 1405 3671 . + . ID=g4590.t1;Parent=g4590;Name=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS exon 1405 2722 . + . ID=g4590.t1.exon1;Parent=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS CDS 1405 2722 . + 0 ID=cds.g4590.t1;Parent=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS exon 2943 3181 . + . ID=g4590.t1.exon2;Parent=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS CDS 2943 3181 . + 2 ID=cds.g4590.t1;Parent=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS exon 3420 3671 . + . ID=g4590.t1.exon3;Parent=g4590.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS CDS 3420 3671 . + 0 ID=cds.g4590.t1;Parent=g4590.t1 #PROT g4590.t1 g4590 MFHYKKDGSLDMRYASSKSAVSSGAFSSGASYMAPSMNSGYGGWSQGMPNQSGHHYKKDGTLDMRYASSKAASASPATSNSGYAYAGGYAASSQGQQGNLHYKKDGTLDMRYASSKASSGLTGQMQRVSIGSVPAGIPVTKQGRPDMRFKAARKYIQESRAPAGGRGPTTMPGSDVPLKKDGTPDMRYKAAQEYVRRQSTAGLEESEDPIRLRKEYWEGRARDDDFMELCQEARQQSVAMPQRPNLLPKTAEYREEFARFCGDGDSIGPTVAPAAPAATTTRTAPAPAASLRSVGVPESVQVVPFNSLTLEREIGRGSFGVVHMAKWNGTTVAVKVLHMAELTKKDKRDLEKELAVMAKLGNHPNLLSLVAYCSAPPALVTEYIQLGSLHYLLHLCEEDAIEAKMSDGRIKKRVLFGIANGLQQLHAVGVIHRDIKPHNVLIKDDFTAVIADFGLATLRGKTSCTLRSDKMGSTDGGGEDAETAAGIAGTAAYMAPELLADMSKAPEASSDIYSFGVLMNELVAEAEPYSEQYRNFHGRGPFAAVEWASRGNRPKIASEASASVAVIALIQKCWDAAPSSRPTASAIVDSLLDAAHLIHSCV* # ORIGINAL: g4592.t1 original gene structure, not modified by PASA NODE_1507_length_10838_cov_57.542 AUGUSTUS gene 9928 10417 . - . ID=g4592;Name=g4592.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS mRNA 9928 10417 . - . ID=g4592.t1;Parent=g4592;Name=g4592.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS exon 10146 10417 . - . ID=g4592.t1.exon1;Parent=g4592.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS CDS 10146 10417 . - 0 ID=cds.g4592.t1;Parent=g4592.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS exon 9928 10009 . - . ID=g4592.t1.exon2;Parent=g4592.t1 NODE_1507_length_10838_cov_57.542 AUGUSTUS CDS 9928 10009 . - 1 ID=cds.g4592.t1;Parent=g4592.t1 #PROT g4592.t1 g4592 MTHGNHHESHEGCNHAHTENHTNMSSELERILYVPEKGHDFYIIAQKGMCQKWRDDPTHLPTREVVMTFQVFHKVTNNHGEPSEASKEEMTHHFGTDDVNEVIQTILKKGHVSGHCA* # PASA_UPDATE: g4591.t1, single gene model update, valid-1, status:[pasa:asmbl_1811,status:3], valid-1 NODE_1507_length_10838_cov_57.542 . gene 4077 9620 . + . ID=g4591;Name=g4591.t1 NODE_1507_length_10838_cov_57.542 . mRNA 4077 9620 . + . ID=g4591.t1;Parent=g4591;Name=g4591.t1 NODE_1507_length_10838_cov_57.542 . five_prime_UTR 4077 4175 . + . ID=g4591.t1.utr5p1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 4077 4226 . + . ID=g4591.t1.exon1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 4176 4226 . + 0 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 4517 6407 . + . ID=g4591.t1.exon2;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 4517 6407 . + 0 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 6695 6918 . + . ID=g4591.t1.exon3;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 6695 6918 . + 2 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 7144 7538 . + . ID=g4591.t1.exon4;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 7144 7538 . + 0 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 7845 8213 . + . ID=g4591.t1.exon5;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 7845 8213 . + 1 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 8520 8616 . + . ID=g4591.t1.exon6;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 8520 8616 . + 1 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . exon 8933 9620 . + . ID=g4591.t1.exon7;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . CDS 8933 9379 . + 0 ID=cds.g4591.t1;Parent=g4591.t1 NODE_1507_length_10838_cov_57.542 . three_prime_UTR 9380 9620 . + . ID=g4591.t1.utr3p1;Parent=g4591.t1 #PROT g4591.t1 g4591 MDFVGVEDSFPFLRGYETLGSVLSDVSKRDYEGTNPVRINYVRVGYGHVFVGVGVSSQRPSLSAPTLPSRMSTVPLTQAPTKDHAQHTHTLVAFDNVKRLHGLDYRDEHSLKQFFASGHLPSVLPHGMLFAAHTSPIVDVLVGVHERSSESRHYALDLREDGSMHAWLFDVSSGQWRHSANSSLANILSSPTSSIVLSAIHVNRSSRLVWCERRGGTSVDAGDTPESDILNCSVHAREVRVAADGRLSLYPATTIMSNCTPATMFELGAQAAIVFEQPMSTHSGAVKVGTSCDSAPSRIYGDAIVVWDSLRDAVSAYAALGVGLSPVLVESLPRGEDDVRDYSSVLIAACSSALTHSPSERVLAVTLRGDGCALILLTNAGSVHEFGGGPVDDDGSCSMLMVSALAQIDMHSSRLASLEPIGAFCGEHYFALLFPPRNFAVGPSAGIFSSYASTAAAVVELHELPTGRHVHTVVVPFDMPPDAPLSLWGDTVNQRCGLWNARMVRHLRVDTSAFTPEVSAASGHSWVSRITGGADTLESLRFRDKIVASLLTKLVRLGRQGNSEEVRFERRRLSARLLDAAVESTVGEERAVSPYGLTPEVRGLLESGVLWCPAFAIMLCAGRIGCAEFLGAAVRKHLAESAKYGRGGMSREENDLLIRYVDTVNTDDAMFARDYLHDQFSLDQRVPDQKELLEYERTRLLGRLRALLQMESRSYRHRRMSEAHVAEIPHAPYWWAGLVTKLCHEWPEESLDTLLSHFGLGLAPTDSDFDGDAAREGGEGVAVGKQKHTRPRASSALGSSIVAGYDDAAVPVAEYAIEWLGPTWRGRSLKGCLRGGVDWRAEFMDEDAVRDNPRFPSFEYACHLIHKLRPTCLPRFVAMVVAAMTTDDDDNDTIHAARQSGHTTHNKTHHGFSGSYYGDDRGGEDSHTSVTVAHRMYERALDLLPKLRPLVDWADDSDGALLTERHRAIAQAVLLASPALGRIQDAARLLVQRGCLDEAIALTRSRKRKDDAVHYEMYHVIVTSAIASEEIARSASVGASILDLLPEGQYSPYALLDSISAGLELRDNAQSSARGSVHRTSGIGEDRHLQHDTHNGHVQGGNVASLVEWEQHLGMEFDPSVHRSPFCDTDGLSIGMFGSAIARATANLVKVEMDSDP* # ORIGINAL: g3081.t1 original gene structure, not modified by PASA NODE_9231_length_339_cov_44.9962_potentialcontaminant AUGUSTUS gene 24 259 . - . ID=g3081;Name=g3081.t1 NODE_9231_length_339_cov_44.9962_potentialcontaminant AUGUSTUS mRNA 24 259 . - . ID=g3081.t1;Parent=g3081;Name=g3081.t1 NODE_9231_length_339_cov_44.9962_potentialcontaminant AUGUSTUS exon 24 259 . - . ID=g3081.t1.exon1;Parent=g3081.t1 NODE_9231_length_339_cov_44.9962_potentialcontaminant AUGUSTUS CDS 24 259 . - 0 ID=cds.g3081.t1;Parent=g3081.t1 #PROT g3081.t1 g3081 MNAADPETQVEKTTALAAFASLRQMLRRKNCTTINNVYPTNSSVVSNTCMANTSRNTFRHIVLRLRIGMMPSATRNGP # PASA_UPDATE: g1303.t1, single gene model update, valid-1, status:[pasa:asmbl_7168,status:12], valid-1 NODE_4273_length_1898_cov_43.8673 . gene 2 1898 . + . ID=g1303;Name=g1303.t1 NODE_4273_length_1898_cov_43.8673 . mRNA 2 1898 . + . ID=g1303.t1;Parent=g1303;Name=g1303.t1 NODE_4273_length_1898_cov_43.8673 . exon 2 1898 . + . ID=g1303.t1.exon1;Parent=g1303.t1 NODE_4273_length_1898_cov_43.8673 . CDS 2 1898 . + 0 ID=cds.g1303.t1;Parent=g1303.t1;5_prime_partial=true;3_prime_partial=true #PROT g1303.t1 g1303 SLSCENADIIGGIGIYGRGHLTEMTPAIEKRLAEISKASLMLLNTDFVPLRPYGLYDRGHLNPNGLNALFLDEGVDKLFAQSVATFSFLNVVPQNKKCNESPKLWKGCETMVMNAILAVVKHFRTKKTQTVFVMTGTIPADGCDPPDSTGGASGGGASDAGGSGEAPQVPLSKSGRPCSVPVALWTEICAPTCFGAFRVQLTNSAACGVGTFDRNVQVMTACHEKWAGQRTAEDDEGKHLEACGNAVFNILKSGISAKQTADMMDVQCDKLRKGACERRFCKWEGNRCVDSDGDRCSEFTGDKYKCELRGCVVARDDGSCKSFFGFGVKGSKLGVTIVRFNNVVPFSMSVLQSQLETALGMSYQLVDTINQPKTSGTTKAMHRWELRKHILQFYLGVGIAYSCNMASEEDRTVGLCAAIATEDIVCHPVAAAPNACHQLATKKHASVGWLTVKKVFLDTFVPVAEKILFESCSLTNKDDCAAALMQFLADPLNEAADPLNEAPTSSSATNFFSEEARKLAVQTAHTHIGHLQMHAGTIRTLENRKRKRIEAAGGESLPKKARMENSQDLKNVATEALEEPLCRCLLDIYEHKHPDESPSADLNAGSDVDMADASSAAARTASDDGVSIDLDP # PASA_UPDATE: g13804.t1, single gene model update, valid-1, status:[pasa:asmbl_6188,status:12], valid-1 NODE_3540_length_3242_cov_42.9842 . gene 134 1390 . - . ID=g13804;Name=g13804.t1 NODE_3540_length_3242_cov_42.9842 . mRNA 134 1390 . - . ID=g13804.t1;Parent=g13804;Name=g13804.t1 NODE_3540_length_3242_cov_42.9842 . five_prime_UTR 1149 1390 . - . ID=g13804.t1.utr5p1;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . exon 1013 1390 . - . ID=g13804.t1.exon1;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . CDS 1013 1148 . - 0 ID=cds.g13804.t1;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . exon 692 910 . - . ID=g13804.t1.exon2;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . CDS 692 910 . - 2 ID=cds.g13804.t1;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . exon 134 477 . - . ID=g13804.t1.exon3;Parent=g13804.t1 NODE_3540_length_3242_cov_42.9842 . CDS 134 477 . - 2 ID=cds.g13804.t1;Parent=g13804.t1;3_prime_partial=true #PROT g13804.t1 g13804 MAKVAIAFAALLALCVLRVEAADPAEASQIRFVHMALEKYGKPIPLLSLFSRNFNAYIFKDVPYGTVQPSSCYQAITPGTHELQLLLSDGLVADSLQLNVTKGREYTVYAVGLSVFLMPFPDDTPQPGNITHTAVLEAKLPTSVYISPNTPPAVPLSYITYISFQIGSIPGQISYAMLSDYPTIDYAPIDSWNKTSIQLFGPIDLGSFDTNRLAPNALTKPMTSTNPLAYLER # PASA_UPDATE: g13805.t1, single gene model update, valid-1, status:[pasa:asmbl_6189,status:12], valid-1 NODE_3540_length_3242_cov_42.9842 . gene 1833 3177 . + . ID=g13805;Name=g13805.t1 NODE_3540_length_3242_cov_42.9842 . mRNA 1833 3177 . + . ID=g13805.t1;Parent=g13805;Name=g13805.t1 NODE_3540_length_3242_cov_42.9842 . five_prime_UTR 1833 2140 . + . ID=g13805.t1.utr5p1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . exon 1833 2193 . + . ID=g13805.t1.exon1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . CDS 2141 2193 . + 0 ID=cds.g13805.t1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . exon 2433 2517 . + . ID=g13805.t1.exon2;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . CDS 2433 2517 . + 1 ID=cds.g13805.t1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . exon 2658 2783 . + . ID=g13805.t1.exon3;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . CDS 2658 2783 . + 0 ID=cds.g13805.t1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . exon 2934 3049 . + . ID=g13805.t1.exon4;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . CDS 2934 3049 . + 0 ID=cds.g13805.t1;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . exon 3129 3177 . + . ID=g13805.t1.exon5;Parent=g13805.t1 NODE_3540_length_3242_cov_42.9842 . CDS 3129 3177 . + 1 ID=cds.g13805.t1;Parent=g13805.t1 #PROT g13805.t1 g13805 MTSLEEYFRSTFEKKLLTKMPEREEDHLTAATRLLEKRREMAEVQQALAGQKDEFHNKMESIQQRREELERKEYQLKESLFKFDKFLKENDSKRARADKKAHDERIQRDTKVKEITTLKDELSQLSSARPDCLKSFGWREGG* # ORIGINAL: g5838.t1 original gene structure, not modified by PASA NODE_1297_length_12336_cov_40.9306 AUGUSTUS gene 2 3272 . + . ID=g5838;Name=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS mRNA 2 3272 . + . ID=g5838.t1;Parent=g5838;Name=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 2 61 . + . ID=g5838.t1.exon1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 2 61 . + 0 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 478 674 . + . ID=g5838.t1.exon2;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 478 674 . + 0 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 970 1141 . + . ID=g5838.t1.exon3;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 970 1141 . + 1 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 1381 1437 . + . ID=g5838.t1.exon4;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 1381 1437 . + 0 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 1802 1918 . + . ID=g5838.t1.exon5;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 1802 1918 . + 0 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 2320 2365 . + . ID=g5838.t1.exon6;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 2320 2365 . + 0 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 2658 2762 . + . ID=g5838.t1.exon7;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 2658 2762 . + 2 ID=cds.g5838.t1;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS exon 3220 3272 . + . ID=g5838.t1.exon8;Parent=g5838.t1 NODE_1297_length_12336_cov_40.9306 AUGUSTUS CDS 3220 3272 . + 2 ID=cds.g5838.t1;Parent=g5838.t1 #PROT g5838.t1 g5838 LLDPIEDMKITDEELRNIIKKIGVLETRLYANPLHKDQAALDVAYAAYVKKLEIEEQISSVRKDLKKSNTIQQMDELKCRKRVLRRLGYTTSADVIELKGRVACEISSADELLMTEMIFNGAFNDLSVEQAVALLSCFVFQEKSEATTKLKEELAGPLRMMQDSARRIARVCKESKLPIEEEEYVASFRPEMMDVVHAWCKGAKFIDVCKMTDIFEGSIIRCMRRLEELLRQMCQAAKSIGNSELENKFAEGINRIKRDIVFAASLYL* # PASA_UPDATE: g5839.t1, single gene model update, valid-1, status:[pasa:asmbl_1123,status:12], valid-1 NODE_1297_length_12336_cov_40.9306 . gene 4103 9136 . + . ID=g5839;Name=g5839.t1 NODE_1297_length_12336_cov_40.9306 . mRNA 4103 9136 . + . ID=g5839.t1;Parent=g5839;Name=g5839.t1 NODE_1297_length_12336_cov_40.9306 . five_prime_UTR 4103 4197 . + . ID=g5839.t1.utr5p1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 4103 4214 . + . ID=g5839.t1.exon1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 4198 4214 . + 0 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 4583 4612 . + . ID=g5839.t1.exon2;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 4583 4612 . + 1 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 4903 5130 . + . ID=g5839.t1.exon3;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 4903 5130 . + 1 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 5512 5530 . + . ID=g5839.t1.exon4;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 5512 5530 . + 1 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 5788 5868 . + . ID=g5839.t1.exon5;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 5788 5868 . + 0 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 6059 6092 . + . ID=g5839.t1.exon6;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 6059 6092 . + 0 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 6447 6461 . + . ID=g5839.t1.exon7;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 6447 6461 . + 2 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 6916 6935 . + . ID=g5839.t1.exon8;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 6916 6935 . + 2 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 7180 7222 . + . ID=g5839.t1.exon9;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 7180 7222 . + 0 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 7413 7759 . + . ID=g5839.t1.exon10;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 7413 7759 . + 2 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 8086 8164 . + . ID=g5839.t1.exon11;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 8086 8164 . + 0 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 8347 8401 . + . ID=g5839.t1.exon12;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 8347 8401 . + 2 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . exon 8768 9136 . + . ID=g5839.t1.exon13;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . CDS 8768 8825 . + 1 ID=cds.g5839.t1;Parent=g5839.t1 NODE_1297_length_12336_cov_40.9306 . three_prime_UTR 8826 9136 . + . ID=g5839.t1.utr3p1;Parent=g5839.t1 #PROT g5839.t1 g5839 MSQPPGYSAQGYPPQGYPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQPGSAQVFTQPVYSQPNMGYPQQGYPMQQQPGAAPGGKPIVFMPMQTGAPADCPPGLEYLHFVDQILVHQCVEIFEALTGFETNNKYQIKNSLGQQVFFAAEDTDCCTRQCCGSSRPFLIRILDNAGKDVMHLRRPLRSSSAWCPFILPVNFCCLQDLAVESPPGNVIGHVRQDWSLCASHFSLYDEHDNKVLTIQGPCCTCECFGDINFEVKSTSEQTIGRVSKQWSGLVKELFTDADNFGVNFPMDLRVQHKALLVASVFLIDFMFFEDSGNNNNNNHY* # PASA_UPDATE: g5840.t1, single gene model update, valid-1, status:[pasa:asmbl_1122,status:12], valid-1 NODE_1297_length_12336_cov_40.9306 . gene 9655 12158 . - . ID=g5840;Name=g5840.t1 NODE_1297_length_12336_cov_40.9306 . mRNA 9655 12158 . - . ID=g5840.t1;Parent=g5840;Name=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 12034 12158 . - . ID=g5840.t1.exon1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 12034 12158 . - 0 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 11530 11710 . - . ID=g5840.t1.exon2;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 11530 11710 . - 1 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 11231 11316 . - . ID=g5840.t1.exon3;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 11231 11316 . - 0 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 10960 11074 . - . ID=g5840.t1.exon4;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 10960 11074 . - 1 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 10609 10715 . - . ID=g5840.t1.exon5;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 10609 10715 . - 0 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 10162 10288 . - . ID=g5840.t1.exon6;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 10162 10288 . - 1 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . exon 9655 9954 . - . ID=g5840.t1.exon7;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . CDS 9832 9954 . - 0 ID=cds.g5840.t1;Parent=g5840.t1 NODE_1297_length_12336_cov_40.9306 . three_prime_UTR 9655 9831 . - . ID=g5840.t1.utr3p1;Parent=g5840.t1 #PROT g5840.t1 g5840 MTTESNTFIARLQSDPELTRLKQDAQRAIDKILVKDQTGNVTLNGRLISELRVPLIHVLRENLRYIPVPRVEQRVHTAVGDFDVIADNIVFSAFDVLPDKLKIDLDNKIALYMKDLNTKVDDASTRLKLKLSDIHAHIKDIDLWYRRTSTPHISGHPRVDVHTSGRGVKVTIRGFMQNVQPMFTAEKVKVRIDKLKIRSVGAHTDTTFNLINRLFSGTIRRRVEMMIEESVRERLEDLNRAMNESFTTPSTGGILGTGLSTGNITDKLGNLVTSRLAGVTGTGKREE* # ORIGINAL: g4893.t1 original gene structure, not modified by PASA NODE_3509_length_3308_cov_35.4606 AUGUSTUS gene 55 3184 . - . ID=g4893;Name=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS mRNA 55 3184 . - . ID=g4893.t1;Parent=g4893;Name=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 3061 3184 . - . ID=g4893.t1.exon1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 3061 3184 . - 0 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 2652 2791 . - . ID=g4893.t1.exon2;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 2652 2791 . - 2 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 2158 2329 . - . ID=g4893.t1.exon3;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 2158 2329 . - 0 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 1627 1844 . - . ID=g4893.t1.exon4;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 1627 1844 . - 2 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 1230 1336 . - . ID=g4893.t1.exon5;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 1230 1336 . - 0 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 620 754 . - . ID=g4893.t1.exon6;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 620 754 . - 1 ID=cds.g4893.t1;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS exon 55 187 . - . ID=g4893.t1.exon7;Parent=g4893.t1 NODE_3509_length_3308_cov_35.4606 AUGUSTUS CDS 55 187 . - 1 ID=cds.g4893.t1;Parent=g4893.t1 #PROT g4893.t1 g4893 MNFEYVARFVVESETGLVYPDSVVGTDSHTAMIGALGVLGFGVGGVESEAAMFGHPVSLSLPRVVGCRIVGVIPPIATSTDAVLAITKTLREMDVSGCFVEFFGRGISQLSITDRATVSNMCPEYDATVGFFPMDSAGIAHVSRIGHMQDKWGLIESYLRRVGLFRTDDAESDDADATAIAYSRVVEIDLSSIVPSCSGPKRPQDKVPVDGMKSDFASCLAGKLGPKGFDIPEARRTDKFEFEFGGKTYSVGHGGLPAITDLAAMRDAVIRLGGDPLRVDLSCPVDTVIEQAAEAEPTGNPTLDANQQLEFERHKERFALLKWSAQAFGKMSVFPPGAGVVRQ # PASA_UPDATE: g8812.t1, single gene model update, valid-1, status:[pasa:asmbl_5195,status:12], valid-1 NODE_2894_length_4818_cov_34.8564 . gene 2786 4123 . - . ID=g8812;Name=g8812.t1 NODE_2894_length_4818_cov_34.8564 . mRNA 2786 4123 . - . ID=g8812.t1;Parent=g8812;Name=g8812.t1 NODE_2894_length_4818_cov_34.8564 . exon 3735 4123 . - . ID=g8812.t1.exon1;Parent=g8812.t1 NODE_2894_length_4818_cov_34.8564 . CDS 3735 4123 . - 0 ID=cds.g8812.t1;Parent=g8812.t1 NODE_2894_length_4818_cov_34.8564 . exon 2786 3397 . - . ID=g8812.t1.exon2;Parent=g8812.t1 NODE_2894_length_4818_cov_34.8564 . CDS 2890 3397 . - 1 ID=cds.g8812.t1;Parent=g8812.t1 NODE_2894_length_4818_cov_34.8564 . three_prime_UTR 2786 2889 . - . ID=g8812.t1.utr3p1;Parent=g8812.t1 #PROT g8812.t1 g8812 MLHGNRRDADKAGGGLPVPAGGDTVGQTAVYIVTPTYARLTQKADLTRMANTLRLVRDIVWVVVEDAPKKSSLVERVLARFGPNHAHLNAASPDTVRDSLNTKPRYKTPRGIEQRNAGIEWILADAVDGRGVVYFADDDNAYDVRVFEVMRQTKRASVWHVGLSGDMLYEGPAVAKQQKREGEEDGKRVHNEVAGATIGHVVDWRTGWKPERPFPIDMAGFAVGVGALRANPRARFSRAAPRGHLESELLGAVVSGKAELEVYGGTDEVLVWHTRTEMPDLRREQEKGVLPRDPRIEV* # ORIGINAL: g8811.t1 original gene structure, not modified by PASA NODE_2894_length_4818_cov_34.8564 AUGUSTUS gene 776 2722 . + . ID=g8811;Name=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS mRNA 776 2722 . + . ID=g8811.t1;Parent=g8811;Name=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 776 829 . + . ID=g8811.t1.exon1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 776 829 . + 0 ID=cds.g8811.t1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 1124 1216 . + . ID=g8811.t1.exon2;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 1124 1216 . + 0 ID=cds.g8811.t1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 1343 1378 . + . ID=g8811.t1.exon3;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 1343 1378 . + 0 ID=cds.g8811.t1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 1563 1651 . + . ID=g8811.t1.exon4;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 1563 1651 . + 0 ID=cds.g8811.t1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 1911 2035 . + . ID=g8811.t1.exon5;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 1911 2035 . + 1 ID=cds.g8811.t1;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS exon 2226 2722 . + . ID=g8811.t1.exon6;Parent=g8811.t1 NODE_2894_length_4818_cov_34.8564 AUGUSTUS CDS 2226 2722 . + 2 ID=cds.g8811.t1;Parent=g8811.t1 #PROT g8811.t1 g8811 MFRRGESRVLDGLFIGSKAMASSEAFVRTNEITHILTVGLGNLAPEPLAGLRYKHVRVWDTETENIFSKFDECFAYVDEGRRGGGAVLVHCYAGKSRSAAVVTAYVMRELRLGVHAAITHVKRARFIISPNPGFMRQLHLFEQQQFAPSSSLTTEEFIMRLAGLPSCVVCQRVSGSRTGDDDPVDIVGGDGGAGADDVQAPRPKVILLPLYADGSNLRSDDSSEGNLNSQHKLLFDDNSADVEQKDIGRSRMAKTVHERTDDDDGEREKGVDEGAFAERKRRRSTEVAPEHELKRDD* # ORIGINAL: g13294.t1 original gene structure, not modified by PASA NODE_2465_length_6172_cov_42.7868 AUGUSTUS gene 1960 3399 . - . ID=g13294;Name=g13294.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS mRNA 1960 3399 . - . ID=g13294.t1;Parent=g13294;Name=g13294.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS exon 1960 3399 . - . ID=g13294.t1.exon1;Parent=g13294.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS CDS 1960 3399 . - 0 ID=cds.g13294.t1;Parent=g13294.t1 #PROT g13294.t1 g13294 MEQNCGISDDALRPQIARVLHALLKEHPELLADALIAFLSKSDDLIFAMIIELAENVFDRRFNQMLAERPELADRNELLRELRSMPRKAGNKALDSASHTPGSTNVTTEVPETAPVPPQKSSVNTATTITEMADENVTDARKIDVGRVTTTVDGMIEVEPAGAGRRRRRGRTDSIETPPAKRTKETPKIAVQTGQEVNISELATASMERLSAKTSLVKLYTSHIDEVSALPADYRDPVNLPFRIRSNDAVQIFENRLEMAVDGVGFEVDGVTFSVEFGKKWALFSRRMFHLRVAIDVVTSVIDLLPRSKKSRGESLLSAPTTEPLGLGFTVADAHTIIPGVGEWRPSIAPSRAFLAHIKSRIWSLVGLIDYPTFVESREELDTCKKSPRLFVCTDNAGGSVEYVDDGGGMRRWSAVVGFGARAMYPPGSKRNIAMPMWFPASLELNCIMFAATCILSGTTDLAVDAHKIVIAKLLAEIL* # ORIGINAL: g13293.t1 original gene structure, not modified by PASA NODE_2465_length_6172_cov_42.7868 AUGUSTUS gene 234 1049 . - . ID=g13293;Name=g13293.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS mRNA 234 1049 . - . ID=g13293.t1;Parent=g13293;Name=g13293.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS exon 924 1049 . - . ID=g13293.t1.exon1;Parent=g13293.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS CDS 924 1049 . - 0 ID=cds.g13293.t1;Parent=g13293.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS exon 234 709 . - . ID=g13293.t1.exon2;Parent=g13293.t1 NODE_2465_length_6172_cov_42.7868 AUGUSTUS CDS 234 709 . - 0 ID=cds.g13293.t1;Parent=g13293.t1 #PROT g13293.t1 g13293 MASRPFRFFLLAILLLATAAFGFLISLYVIERDGSVRQDRNEDIVVDELLRRVTESEKIIRDQRRALADLNAKAAAIAAVPQQRPDRRVVPVPAVAEPHTKDDDASAPARKEWERAIPILVISCNRVEITRCLDTLLRYRPSDKFPIIVSQDCGDPSTANVIRDKYGTSVIHLQQPDLSNIRPAPNLFNFVGYYKISRHY # PASA_UPDATE: g13295.t1, single gene model update, valid-1, status:[pasa:asmbl_4371,status:13],[pasa:asmbl_4372,status:12], valid-1 NODE_2465_length_6172_cov_42.7868 . gene 3982 6172 . - . ID=g13295;Name=g13295.t1 NODE_2465_length_6172_cov_42.7868 . mRNA 3982 6172 . - . ID=g13295.t1;Parent=g13295;Name=g13295.t1 NODE_2465_length_6172_cov_42.7868 . exon 5673 6172 . - . ID=g13295.t1.exon1;Parent=g13295.t1 NODE_2465_length_6172_cov_42.7868 . CDS 5673 6172 . - 0 ID=cds.g13295.t1;Parent=g13295.t1;5_prime_partial=true NODE_2465_length_6172_cov_42.7868 . exon 4870 5361 . - . ID=g13295.t1.exon2;Parent=g13295.t1 NODE_2465_length_6172_cov_42.7868 . CDS 4870 5361 . - 1 ID=cds.g13295.t1;Parent=g13295.t1 NODE_2465_length_6172_cov_42.7868 . exon 3982 4628 . - . ID=g13295.t1.exon3;Parent=g13295.t1 NODE_2465_length_6172_cov_42.7868 . CDS 4454 4628 . - 1 ID=cds.g13295.t1;Parent=g13295.t1 NODE_2465_length_6172_cov_42.7868 . three_prime_UTR 3982 4453 . - . ID=g13295.t1.utr3p1;Parent=g13295.t1 #PROT g13295.t1 g13295 THPHSHTHTQGTKSRSQYDLEVEIENLGGHLNAYTSREQTVYYAKVFKNDVGRAVDILSDIIQNSQYSEQNIERERDVILREMREIGNQVEEVIFDHLHATAYQGTPLGLTILGPAENVKNITRKDLVDYVSTHYTAPRMVLAAAGGINHEELVKLAEEKFSKLPTTREIPKLNKCRYTGSEMRVRDDDKGVAHVALAVQSVGWAHPDYFPLMVANSIVGGWDRSFGGGKHLSSHLLDEVIHNNLAHSYMSFHTTYSDTGLWGTYLVSDPMAVEDMVWEVEQEWMRIATAATEAEVTRARNQLKANMLLQLDGTTPICEDIGRQILTYGRRLTPAEIDARLNAVDAKAVRRVMMEHVYDRDPALAAIGSVEGVPEYNRLRSGLFLLRV* # PASA_UPDATE: g3833.t1, single gene model update, valid-1, status:[pasa:asmbl_6167,status:12], valid-1 NODE_3513_length_3293_cov_34.6405 . gene 438 3028 . + . ID=g3833;Name=g3833.t1 NODE_3513_length_3293_cov_34.6405 . mRNA 438 3028 . + . ID=g3833.t1;Parent=g3833;Name=g3833.t1 NODE_3513_length_3293_cov_34.6405 . five_prime_UTR 438 502 . + . ID=g3833.t1.utr5p1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 438 534 . + . ID=g3833.t1.exon1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 503 534 . + 0 ID=cds.g3833.t1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 628 875 . + . ID=g3833.t1.exon2;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 628 875 . + 1 ID=cds.g3833.t1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 1136 1250 . + . ID=g3833.t1.exon3;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 1136 1250 . + 2 ID=cds.g3833.t1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 1592 1738 . + . ID=g3833.t1.exon4;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 1592 1738 . + 1 ID=cds.g3833.t1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 2590 2746 . + . ID=g3833.t1.exon5;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 2590 2746 . + 1 ID=cds.g3833.t1;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . exon 2937 3028 . + . ID=g3833.t1.exon6;Parent=g3833.t1 NODE_3513_length_3293_cov_34.6405 . CDS 2937 3028 . + 0 ID=cds.g3833.t1;Parent=g3833.t1;3_prime_partial=true #PROT g3833.t1 g3833 MIALTALRNLRAPPHTTWRCSQSIRSSIRSFSKIVHDGNYAPPILAPLVDNLRGVAREREMDIAKQNNAHVAEIVSLGEKLGSSYFFPLDTLPAFDTVSALDYDQLWRQLRQSSRVMGQLAIQSMEKAAILRSGMKTTPQDDKVVATTDVHCLVSAVYSVLTNMGMRGRTFVESGDSRRYSTIVGALQNRSGHPLMICVIVMSVLHRLGVRSCPVFVNGKCVVGVPSDQPVGSVHPIFDTCTSGSSPIPAIDMIVDVSGGFFT # PASA_UPDATE: g3096.t1, single gene model update, valid-1, status:[pasa:asmbl_9189,status:12], valid-1 NODE_7507_length_431_cov_68.1601_potentialcontaminant . gene 1 412 . - . ID=g3096;Name=g3096.t1 NODE_7507_length_431_cov_68.1601_potentialcontaminant . mRNA 1 412 . - . ID=g3096.t1;Parent=g3096;Name=g3096.t1 NODE_7507_length_431_cov_68.1601_potentialcontaminant . five_prime_UTR 403 412 . - . ID=g3096.t1.utr5p1;Parent=g3096.t1 NODE_7507_length_431_cov_68.1601_potentialcontaminant . exon 1 412 . - . ID=g3096.t1.exon1;Parent=g3096.t1 NODE_7507_length_431_cov_68.1601_potentialcontaminant . CDS 1 402 . - 0 ID=cds.g3096.t1;Parent=g3096.t1;3_prime_partial=true #PROT g3096.t1 g3096 MGAKSGGWEIGFRVGIEARDELVNVCVLIFLGIAVEFANGIRVGTDVQTQTMFAGQVYRQRGNRDGRGRWGDDQRRWWIDRCGDRIRLSNLIDRERITGQRRERGQGVLDSSQCGIHSLQRSTDDLKDSSCKVG # PASA_UPDATE: g9905.t1, single gene model update, valid-1, status:[pasa:asmbl_1638,status:12],[pasa:asmbl_1639,status:12], valid-1 NODE_1450_length_11207_cov_38.999 . gene 7523 10988 . + . ID=g9905;Name=g9905.t1 NODE_1450_length_11207_cov_38.999 . mRNA 7523 10988 . + . ID=g9905.t1;Parent=g9905;Name=g9905.t1 NODE_1450_length_11207_cov_38.999 . exon 7523 7848 . + . ID=g9905.t1.exon1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . CDS 7523 7848 . + 0 ID=cds.g9905.t1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . exon 8053 8741 . + . ID=g9905.t1.exon2;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . CDS 8053 8741 . + 1 ID=cds.g9905.t1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . exon 9387 9480 . + . ID=g9905.t1.exon3;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . CDS 9387 9480 . + 2 ID=cds.g9905.t1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . exon 9740 9914 . + . ID=g9905.t1.exon4;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . CDS 9740 9914 . + 1 ID=cds.g9905.t1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . exon 10154 10988 . + . ID=g9905.t1.exon5;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . CDS 10154 10516 . + 0 ID=cds.g9905.t1;Parent=g9905.t1 NODE_1450_length_11207_cov_38.999 . three_prime_UTR 10517 10988 . + . ID=g9905.t1.utr3p1;Parent=g9905.t1 #PROT g9905.t1 g9905 MSHPASPAQPPPVVPRTRVPSRGGNGGRRMQHVTVGAPIVDPDRRVLVFPVTTLRLPDAALTSPELVVAEFSRVPLPKNALRPFSAFEWLVHVLGTESLGVIVPSIPDRPNSTLFGDAFHSEKKRRRLERCLERLCAHPVLSLRPALFQFLLADDLPPPALHWTPPTDHARLAELKRALLLGANLSTSSGLTTFRELPPATASSSGAPAATAATTTTVTTTSAAGGSVASMSAAAKATLGGIFRAIGQRVYTPPVATHFRSVDGIDVLVQPGEDDLDFIGAGEAVHGCCMRTIALVQVLSVREAAVRECAAAFGAVGRELLRVGLAETARNSGAGLPLCRLGRATIAAENSEKEKAQIDVLVIGDALVESCRDAESAKTALSVRTAVVAIAREALEHVKAKDAAHTHFKRSLDFDPTKTARAKTELDKAQADVARLQARQVTCNDTLRRELAAAQVSRETALVRAFAQYARSQLAVAQSQCDGWRAVRDELIADDDDADASVNDTGSGSGGGSGSGSSSVGGVRRTSGLVDARRRSSQGAGVISPTLH* # PASA_UPDATE: g9904.t1, single gene model update, valid-1, status:[pasa:asmbl_1636,status:12],[pasa:asmbl_1637,status:12], valid-1 NODE_1450_length_11207_cov_38.999 . gene 317 7036 . + . ID=g9904;Name=g9904.t1 NODE_1450_length_11207_cov_38.999 . mRNA 317 7036 . + . ID=g9904.t1;Parent=g9904;Name=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 317 876 . + . ID=g9904.t1.exon1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 317 876 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 1033 1164 . + . ID=g9904.t1.exon2;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 1033 1164 . + 1 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 1323 1514 . + . ID=g9904.t1.exon3;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 1323 1514 . + 1 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 1684 1806 . + . ID=g9904.t1.exon4;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 1684 1806 . + 1 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 2003 2147 . + . ID=g9904.t1.exon5;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 2003 2147 . + 1 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 2520 2537 . + . ID=g9904.t1.exon6;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 2520 2537 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 2792 2854 . + . ID=g9904.t1.exon7;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 2792 2854 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 3167 3355 . + . ID=g9904.t1.exon8;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 3167 3355 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 3494 3569 . + . ID=g9904.t1.exon9;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 3494 3569 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 3845 3927 . + . ID=g9904.t1.exon10;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 3845 3927 . + 2 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 4145 4310 . + . ID=g9904.t1.exon11;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 4145 4310 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 4499 4583 . + . ID=g9904.t1.exon12;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 4499 4583 . + 2 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 4835 4959 . + . ID=g9904.t1.exon13;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 4835 4959 . + 1 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 5118 5275 . + . ID=g9904.t1.exon14;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 5118 5275 . + 2 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 5446 5566 . + . ID=g9904.t1.exon15;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 5446 5566 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 5730 6055 . + . ID=g9904.t1.exon16;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 5730 6055 . + 2 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 6239 6355 . + . ID=g9904.t1.exon17;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 6239 6355 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . exon 6545 7036 . + . ID=g9904.t1.exon18;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . CDS 6545 6832 . + 0 ID=cds.g9904.t1;Parent=g9904.t1 NODE_1450_length_11207_cov_38.999 . three_prime_UTR 6833 7036 . + . ID=g9904.t1.utr3p1;Parent=g9904.t1 #PROT g9904.t1 g9904 MLCAVDCWDGADSEPIIYHGHTLTSKIKFRDVVAAIRDHAFVASPYPVILSIENHCCIEQQRIMAQVFKDTLGDFLLTAPVGTNKDFLPSPDALKYKVIIKNKKLKEGGAQEDVVELNAQDRMLSSDKTGPMLFEDPSDREWLRYSFVLASDKLYYGKMPEAEDEEEDDEEDDKGSDKEYELHFGERWFHGKLPNGRPDAERLLKAFSGPDGSFLVRESATYAGDYSLSFWRNGQVNHCHIKSPAEGKYALTDQISFANLYELIEYYRREPLKSANFQQLLTEAVPHVENYENKKWFHKKLSRVDAENLLRLVRKDGSFLVRQSETEVESFAITFRAEGKIKHCRVKCEGRLYVIGNACFESLDELVNYYKKHTLYRKMKLKFPELQTGESAEDDDIYISESHYQEPNEQKVVVKALYDYRSARNDELSFMKDAIIEDVNKLDSGWWEGELGGKRGLFPANYVEEIDMTQPQTSEDNTMIDSPLGNLQIGVVDLAGSVVIPDRQKPRVFQIKTAAGLVVTLQGEDDMSAADWMQSLVSAGKEAGEKAVAVNKAVAKQKVAKELSDIVVYCRSTSFESFEACREKGKFYDMSSFPENKADRLARKNGAEFIEYNVRQFSRIYPAGKRVDSSNYSPELMWNVGCQMVALNYQTPDRAMQINEGFFMQNGRCGFVLKPESVRDFFMWNPNDPTAIPLPTIKPVHISLLILSGKHILKTGKGIASPFVEVELIGCEADANNGKYRTKTKADNGFNPVWHEHWEFDVRVPDLAMLRFTVMDEDMFGDPNFIGQAVVPLSTMRSGYRALPLRNGYSETLELASLFVHVAVETSRETNELATRIAQLRDQMKVFSQAIDKEVKIRYAAQNLANSPEASKAQKNEAMKAVKESEKTMQTLQAEIKKTDAELLMLTQQQQRNSTSEIPSSSGAAAGGRGSVPSMATHIPLTTGRSSGDTLPRGGGSVPSTDSIKKMPAVSKIERLAGGTPPASPRPR* # ORIGINAL: g1906.t1 original gene structure, not modified by PASA NODE_2992_length_4572_cov_62.2659_potentialcontaminant AUGUSTUS gene 783 4169 . + . ID=g1906;Name=g1906.t1 NODE_2992_length_4572_cov_62.2659_potentialcontaminant AUGUSTUS mRNA 783 4169 . + . ID=g1906.t1;Parent=g1906;Name=g1906.t1 NODE_2992_length_4572_cov_62.2659_potentialcontaminant AUGUSTUS exon 783 4169 . + . ID=g1906.t1.exon1;Parent=g1906.t1 NODE_2992_length_4572_cov_62.2659_potentialcontaminant AUGUSTUS CDS 783 4169 . + 0 ID=cds.g1906.t1;Parent=g1906.t1 #PROT g1906.t1 g1906 MLSDWHKTWSSLFDNCEVTFPKRLPHGISDRRADAVVHDGRIVVEFQHSEISRQEVANRKHDYCDGHGLELVWIIDGEKVKVLRLEFSDTYLLNFNSCRWKYQNFLDHDFIYLDCNGTIFRVQPADIKSHMVQVRTGKPTAEFVNSLKAGTHADWPLDDPLPQCTLYHNQRGAGCGKTYESIQLLAGRNPTFAHVRQFVYLTKIHAAKTVIYEEFKEQLKADQLNVNGDEYIDSIAGKQYRIKFTRKTDGAQISVVIGTIDSFIYALMGGMNMKTASTKGGDIFKTLCQSIKDGVVQGVYREDGCFRYASGNVALNHECLAIVDEAQDLEPVYVEALAVIMRDTYIDTYMIGDKLQSVHGEKNIFTYLENPAKQLPYTNVIYSTGENVVRRFHTPEHAEFVNKAVDFAKYGLPPITGICPGNCKYAATHALQSRAVECSADHPDLAAPQRAVLLFSQQTIKPYTKSEIVNDVVKKVVNFVQENVQQNDYLPHNFMFIFPILKKNQLAECLETSLTQFWIDTFKDTAFQERVLAKHPYWQDKFDDNGFYKHAFLHKSEDDKPIDLTLSLWSSRLVSIHASKGQGCEVVFLLNMSERTLDYMCGGEKNLKYDSLIHVAVTRQKLKLYVGIQPVTDDIQSRFDTPCNAAETDRSFDNTSVSVEQVVTFANSSSTWYERFQNEYFEAANCLVPEEGKFSSIIEWGHHIIRHKVMYFTLIHSIANEASGNDQIFKVVEKICSCSHVTPMSNAEYYTELYRIELLNDQSKKQGEAKSGERPDVIPILRYDAKKNSKYSLYCDVLVNFVKKVQHKLIHNEQKGLPKLCPIEMCVFVHLIDILDNGTFADFSINELYDIIHSMTLAGQVQHDGYDCLCNQSFTSNDRRTDEQFNQIRTSVADHYEIVARIHNMFKSFRDHLTTSGDTTAPKFHINHRIYVQPNVNSTQKESPFHLIFGHVPVMATTENNVVLFALQPSFNLTTCSKVFVDALLKTFLALNVSDDSPNAKRFHNKRVHVCVFSFTTATPTWIELCYDSDKSIRALLKDFMIKKFQRTNNALWSMFEECKTSAKTMRQAFDSMEANMKVYKAPAYAVEFFGNARTDSRVAKTYSVTKVEDLTTAFENKVEDWLKLDDW* # PASA_UPDATE: g12165.t1, single gene model update, valid-1, status:[pasa:asmbl_1899,status:12], valid-1 NODE_1535_length_10647_cov_34.2122 . gene 5227 10565 . + . ID=g12165;Name=g12165.t1 NODE_1535_length_10647_cov_34.2122 . mRNA 5227 10565 . + . ID=g12165.t1;Parent=g12165;Name=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 5227 5254 . + . ID=g12165.t1.exon1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 5227 5254 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 5629 5696 . + . ID=g12165.t1.exon2;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 5629 5696 . + 2 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 5834 5923 . + . ID=g12165.t1.exon3;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 5834 5923 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 6297 6645 . + . ID=g12165.t1.exon4;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 6297 6645 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 6854 6972 . + . ID=g12165.t1.exon5;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 6854 6972 . + 2 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 7226 7351 . + . ID=g12165.t1.exon6;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 7226 7351 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 7594 7936 . + . ID=g12165.t1.exon7;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 7594 7936 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 8134 8228 . + . ID=g12165.t1.exon8;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 8134 8228 . + 2 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 8597 8779 . + . ID=g12165.t1.exon9;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 8597 8779 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 8947 9043 . + . ID=g12165.t1.exon10;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 8947 9043 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 9200 9383 . + . ID=g12165.t1.exon11;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 9200 9383 . + 2 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 9586 9721 . + . ID=g12165.t1.exon12;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 9586 9721 . + 1 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 10048 10252 . + . ID=g12165.t1.exon13;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 10048 10252 . + 0 ID=cds.g12165.t1;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . exon 10381 10565 . + . ID=g12165.t1.exon14;Parent=g12165.t1 NODE_1535_length_10647_cov_34.2122 . CDS 10381 10565 . + 2 ID=cds.g12165.t1;Parent=g12165.t1 #PROT g12165.t1 g12165 MISARGYFLVVRDNRTPDALRIAELCAKLESKTSISNKWAALYFLHSVSEDRRTGQDALAFASGIFAVRKNVHAPSDVAYQSAPSVSAHYHHDNDDTRAHDPQQRHTQHDTAGLEPLGGRIPVSGESTGGNRLGNPGVTDSLGNALIKSLAAQSSATSAWSSELSAVFSIDEYRATIDYSDTVCEDELLRDVLYAFQGIDGRFVKFDAARDAYVVDPRAHASLPVRELIMRLVDIGWLFRKANEFVKSKSATDSNGLVMQAMSAAVHAELDEFYRLIAVLEGHLNSHPQSASGGVLPARPATAEGTVVSSADSSLVLPLGHVGAAPAAGGRQATAARAAATTTHSSLTLRRLVVWTHEPLHRLRFVVSMCDACKDLKGGAIATAVYAFVQYGDPVIRDLAKHMLEQICRPMHRMLRRWTEEGDLVDPHSEFFIAADTTATADIAWERKYTLRRAMLPVFISQEVARKILLIGKSIDFIRHACGERDVSKEGSLEGEDADGVAFVDVSLLESKIDAVYRSRSKTLLGLLFDRFRLMDHLRALRRYMLLGQGDFVEHLMDVITPELSRPATELHHHTLSSLLETAIRATNAQYDDQDVLKRLDVTMLEPSAGDAGWDVFGLRYFVESPLSTVVSPHASRQYGRLFNFLWRLKRMEHLLASAWRTQMTGARALAQIQGIASAFHSSRILAAEMVHFVNQMQYYMVFEVGWLVCCCSIDSVVPPMYEPRLHIALAATLS* # ORIGINAL: g12164.t1 original gene structure, not modified by PASA NODE_1535_length_10647_cov_34.2122 AUGUSTUS gene 2249 2845 . + . ID=g12164;Name=g12164.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS mRNA 2249 2845 . + . ID=g12164.t1;Parent=g12164;Name=g12164.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 2249 2416 . + . ID=g12164.t1.exon1;Parent=g12164.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 2249 2416 . + 0 ID=cds.g12164.t1;Parent=g12164.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 2714 2845 . + . ID=g12164.t1.exon2;Parent=g12164.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 2714 2845 . + 0 ID=cds.g12164.t1;Parent=g12164.t1 #PROT g12164.t1 g12164 MPPEVRPGDPTYTRWSSLFPRARKKPKNGVRIVGSRQSSSGMLHEMDDEFDDHVALTDGDVATMAFESDHGQNSIRGKIRITQSTDADDGNFGNDDTDA* # ORIGINAL: g12163.t1 original gene structure, not modified by PASA NODE_1535_length_10647_cov_34.2122 AUGUSTUS gene 533 2017 . + . ID=g12163;Name=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS mRNA 533 2017 . + . ID=g12163.t1;Parent=g12163;Name=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 533 838 . + . ID=g12163.t1.exon1;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 533 838 . + 0 ID=cds.g12163.t1;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 1090 1207 . + . ID=g12163.t1.exon2;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 1090 1207 . + 0 ID=cds.g12163.t1;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 1443 1630 . + . ID=g12163.t1.exon3;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 1443 1630 . + 2 ID=cds.g12163.t1;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS exon 1847 2017 . + . ID=g12163.t1.exon4;Parent=g12163.t1 NODE_1535_length_10647_cov_34.2122 AUGUSTUS CDS 1847 2017 . + 0 ID=cds.g12163.t1;Parent=g12163.t1 #PROT g12163.t1 g12163 MKHTSLNKHPLLETAFFVLISYVSFLLADGMGLSGICAVLFCGIAQAHYTFNNLSLEGRRRTKELFELLNFMAENFVFSYLGLSVFTFRHHEFRPGFIGVAVLVLLFSRAAHVFPLSWIINCVVPPKRRIPWNFQLMIWYSGLRGAMAFSLAMSSVRHEGQRIILTTTLCIIVLTVFLMGGSTLTMMEKLKIAVGVVEVDTDEEHVNETEEEEALRVETAQSDGQRWIDRWLNIDRLYPPHFLFKRQSVFIFFAFVVSPF* # PASA_UPDATE: novel_model_16_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_5611,status:3], valid-1 NODE_3139_length_4220_cov_36.0494 . gene 176 1928 . + . ID=novel_gene_16_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_3139_length_4220_cov_36.0494 . mRNA 176 1928 . + . ID=novel_model_16_5b6be656;Parent=novel_gene_16_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_3139_length_4220_cov_36.0494 . five_prime_UTR 176 222 . + . ID=novel_model_16_5b6be656.utr5p1;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . exon 176 315 . + . ID=novel_model_16_5b6be656.exon1;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . CDS 223 315 . + 0 ID=cds.novel_model_16_5b6be656;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . exon 655 663 . + . ID=novel_model_16_5b6be656.exon2;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . CDS 655 663 . + 0 ID=cds.novel_model_16_5b6be656;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . exon 813 995 . + . ID=novel_model_16_5b6be656.exon3;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . CDS 813 995 . + 0 ID=cds.novel_model_16_5b6be656;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . exon 1284 1451 . + . ID=novel_model_16_5b6be656.exon4;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . CDS 1284 1451 . + 0 ID=cds.novel_model_16_5b6be656;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . exon 1832 1928 . + . ID=novel_model_16_5b6be656.exon5;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . CDS 1832 1870 . + 0 ID=cds.novel_model_16_5b6be656;Parent=novel_model_16_5b6be656 NODE_3139_length_4220_cov_36.0494 . three_prime_UTR 1871 1928 . + . ID=novel_model_16_5b6be656.utr3p1;Parent=novel_model_16_5b6be656 #PROT novel_model_16_5b6be656 novel_gene_16_5b6be656 MSRTQVEQIGTDSAPTENGGKYRFLPAGFMFCGWVLLFLFTGKISYDSEFPTNNNGDNTSIFYSQTSSGAFWFFWVILLVTLIAIITTVFRKFSVASRFATMTIVLMFFYFMLTADQLQPCLKSSYREGRSRACNINAVGAAGGITTLIGAVLGAILLSTSNY* # PASA_UPDATE: g11719.t1, single gene model update, valid-1, status:[pasa:asmbl_5612,status:13],[pasa:asmbl_5613,status:12], valid-1 NODE_3139_length_4220_cov_36.0494 . gene 2071 3968 . - . ID=g11719;Name=g11719.t1 NODE_3139_length_4220_cov_36.0494 . mRNA 2071 3968 . - . ID=g11719.t1;Parent=g11719;Name=g11719.t1 NODE_3139_length_4220_cov_36.0494 . exon 3882 3968 . - . ID=g11719.t1.exon1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . CDS 3882 3968 . - 0 ID=cds.g11719.t1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . exon 3492 3609 . - . ID=g11719.t1.exon2;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . CDS 3492 3609 . - 0 ID=cds.g11719.t1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . exon 3268 3309 . - . ID=g11719.t1.exon3;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . CDS 3268 3309 . - 2 ID=cds.g11719.t1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . exon 2945 3064 . - . ID=g11719.t1.exon4;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . CDS 2945 3064 . - 2 ID=cds.g11719.t1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . exon 2071 2767 . - . ID=g11719.t1.exon5;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . CDS 2484 2767 . - 2 ID=cds.g11719.t1;Parent=g11719.t1 NODE_3139_length_4220_cov_36.0494 . three_prime_UTR 2071 2483 . - . ID=g11719.t1.utr3p1;Parent=g11719.t1 #PROT g11719.t1 g11719 MTYSLNSDAAKGLQYLHDQPQPILHCDLKSPNLLLDSHNVVKVSDFGLSRIKVKQDDVDEGLGTVLWMAPEAIAGTSYTALSDVFSYAIIMWEVLTNGRPMENAERLYPGAMAAYMIAVTHQDLRPDVPEWCPRALTRLMRRAWDPTPDARPSMAGILDVLDGFISTAPSHTLQVPWPPADGWKPSEDERSALYSPRVSRGPMSPHIKPSAPKHAF* # ORIGINAL: g13235.t1 original gene structure, not modified by PASA NODE_1457_length_11169_cov_42.7764 AUGUSTUS gene 9228 10894 . + . ID=g13235;Name=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS mRNA 9228 10894 . + . ID=g13235.t1;Parent=g13235;Name=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 9228 9230 . + . ID=g13235.t1.exon1;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 9228 9230 . + 0 ID=cds.g13235.t1;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 9486 9583 . + . ID=g13235.t1.exon2;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 9486 9583 . + 0 ID=cds.g13235.t1;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 9799 9909 . + . ID=g13235.t1.exon3;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 9799 9909 . + 1 ID=cds.g13235.t1;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 10147 10368 . + . ID=g13235.t1.exon4;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 10147 10368 . + 1 ID=cds.g13235.t1;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 10816 10894 . + . ID=g13235.t1.exon5;Parent=g13235.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 10816 10894 . + 1 ID=cds.g13235.t1;Parent=g13235.t1 #PROT g13235.t1 g13235 MAGRRAARQSSSPRRNNGSEDPLSEAADEVFPSSPGVGDSFDNEPADVIDEDNGDGEDDEGEDLIGDNMEEDYRPMPHLDRYDEAVLDSQDYDDMSLDERRAAEVAMRKRDRDVMRREGRVPAALLDEDSDDRVGVLCLSVERNGRRDDGDWLSPVRILETSMMTARYVC* # ORIGINAL: g13232.t1 original gene structure, not modified by PASA NODE_1457_length_11169_cov_42.7764 AUGUSTUS gene 53 555 . - . ID=g13232;Name=g13232.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS mRNA 53 555 . - . ID=g13232.t1;Parent=g13232;Name=g13232.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 427 555 . - . ID=g13232.t1.exon1;Parent=g13232.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 427 555 . - 0 ID=cds.g13232.t1;Parent=g13232.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS exon 53 173 . - . ID=g13232.t1.exon2;Parent=g13232.t1 NODE_1457_length_11169_cov_42.7764 AUGUSTUS CDS 53 173 . - 0 ID=cds.g13232.t1;Parent=g13232.t1 #PROT g13232.t1 g13232 MWDYPSGQLRHVIETGHSANIFSAKFMPTTNESVLVTCAGDAEVRILTPRGHLLKLYECNGTRVKKIGTEPGNPHFFMSCGED # PASA_UPDATE: g13234.t1, single gene model update, valid-1, status:[pasa:asmbl_1658,status:3], valid-1 NODE_1457_length_11169_cov_42.7764 . gene 3785 8663 . + . ID=g13234;Name=g13234.t1 NODE_1457_length_11169_cov_42.7764 . mRNA 3785 8663 . + . ID=g13234.t1;Parent=g13234;Name=g13234.t1 NODE_1457_length_11169_cov_42.7764 . five_prime_UTR 3785 3954 . + . ID=g13234.t1.utr5p1;Parent=g13234.t1 NODE_1457_length_11169_cov_42.7764 . exon 3785 7332 . + . ID=g13234.t1.exon1;Parent=g13234.t1 NODE_1457_length_11169_cov_42.7764 . CDS 3955 7332 . + 0 ID=cds.g13234.t1;Parent=g13234.t1 NODE_1457_length_11169_cov_42.7764 . exon 7532 8663 . + . ID=g13234.t1.exon2;Parent=g13234.t1 NODE_1457_length_11169_cov_42.7764 . CDS 7532 8557 . + 0 ID=cds.g13234.t1;Parent=g13234.t1 NODE_1457_length_11169_cov_42.7764 . three_prime_UTR 8558 8663 . + . ID=g13234.t1.utr3p1;Parent=g13234.t1 #PROT g13234.t1 g13234 MADMRVRTREFENAAYSVLFAMVHDSELGPVLAFLALLVEDIQLLSFSWSRQFGFTPLPGLFAFEYKGTNENYGAFQAIFGVAFAVVLVVILTCLYIGISYRIGRFRAVWPVRLLRLLSTLLSTLLLMPITTVFLQAVNCKKNSVSGEVELVDYPGTACFSGKHAPVFALSLVSLVFMITYALTMALICFEQDPRSKNPSARPHGRAEAVYVFVRVFLLAVYEFAGHESRSASGAKLGVALPSLLFLCYVVLYYQPFYVSRMTDIRAGIFFASAGGVIIAIGIFASNGGSGTAAFAVLCVLTPAFFVGGYFASGFVRRRIIDGVYNRLAIAPPIRMLSRQGTGFNIRDMAGYAAAGDEPEMKGRWTRDAIRKVAMRKVKKDPPVFDRVTDVEIAARFLRENREADAILLAHDLFATALQEFPRSALLRIVHARYIANYSGQATAARKQLEAAMSMRPPFDIRCLIFMEQRSLDQEKHTEGLGIDDNLNITSYIQFQMAQTGARRHHIEALRLSRSFWHTASSSTVDAPLLFDTAHQLSLSTAKARNHYERLLSEYPKSKTNLRLYSQFLRVVCNNADLAAEYANAADDIEEEEMRLSTARARSLQQRRESKRSSSAGLMGAMVTDGDDEDRNSSGSKEMGSGESGHNDIRMHILEHGPRHHMFEHGTLYEENEEEAHEEEDEEAGGLPGVAYYGGSNDRMDTGSISSGRMGSRDMDDSGDEVKVVVTDVDGVAQNMPPLIEMSAAPLTKKQSRRGSVSFGINDAAGVPTAASAATTDPAIAEKRMESRSASREELRLRLGGCISQARPLDVIGGEQKIDRILSARRPSLGGLSAIKPSQPEGDNKWGSRSTASSSVTSREQNTQRLRRQRVEQRLKKPAVNERIKGTLCSLALLALIVAGYIVSLQVADSGTERLQDLKTATRPRRSAAQLTLNTRDLLRAVAIRSESTYNKTLATIVKEVDRFDTEIMGYMVAKGLSIPRIRTQSVSNPTAPKVAEKVTAMHASMLMLMHLRALSGIPYTVAITDPVGMLFRPEVRYLLDNGLGIALGTSAETDDGETQYERESSSQNSQMYGLLAAFLAVDIGIFFLVFIPLMRKMTSRRAKIAALFKLVPRASVTEKVATLDEELECLVALIPEEADKIGLAIPADATESAEAMTARNEQVAIMNAGNTGGDKSNSSAALNIESAHIERSSPWKLWMRFAVGIIVVGAFAIGMYITPIQQNEKNNNMARLINLSNSRRYISQGIAALANELVAADNSTWLPGETITVLNEWVSALESAHTMCVDGTSRTTSTNKVSSLYNELIAGGTCHLATVGGCDTRLYNPSIGLTSALVKVGMNRMIEYYINRAKSYSQQATPYAYSDGDRIVLNELNTDIKDGLATVDATIISDVTEQNVRLKKNIGLLFGLTVAAIVGFFVACIWFATRRFEAEIVQIVRLFFDMPLPLLLSVAQLRRFLESGGDLTAK* # PASA_UPDATE: g13233.t1, single gene model update, valid-1, status:[pasa:asmbl_1657,status:3], valid-1 NODE_1457_length_11169_cov_42.7764 . gene 1674 3084 . + . ID=g13233;Name=g13233.t1 NODE_1457_length_11169_cov_42.7764 . mRNA 1674 3084 . + . ID=g13233.t1;Parent=g13233;Name=g13233.t1 NODE_1457_length_11169_cov_42.7764 . five_prime_UTR 1674 1750 . + . ID=g13233.t1.utr5p1;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . exon 1674 1997 . + . ID=g13233.t1.exon1;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . CDS 1751 1997 . + 0 ID=cds.g13233.t1;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . exon 2386 2656 . + . ID=g13233.t1.exon2;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . CDS 2386 2656 . + 2 ID=cds.g13233.t1;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . exon 2830 3084 . + . ID=g13233.t1.exon3;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . CDS 2830 2908 . + 1 ID=cds.g13233.t1;Parent=g13233.t1 NODE_1457_length_11169_cov_42.7764 . three_prime_UTR 2909 3084 . + . ID=g13233.t1.utr3p1;Parent=g13233.t1 #PROT g13233.t1 g13233 MYSIGRVTEAIIVVAIVLCAHAIAISVGDIDGGHVCGENGKNYSSKDAAHADGVRALHAGYCGACSNHQDIDVYNVTRNNLTSITKRCAMLYTLLGEHAASKCMDKVGMTVPCQECWMENIECDRHSKCFWICIKSTLRGDPTNKPDGSLNDCLQCDEDVCGPAFIGCAGANRRKSGIHSDIDRPGDQVWEGDDWSPA* # PASA_UPDATE: g10695.t1, single gene model update, valid-1, status:[pasa:asmbl_5015,status:3], valid-1 NODE_2790_length_5119_cov_33.8699 . gene 2559 4898 . - . ID=g10695;Name=g10695.t1 NODE_2790_length_5119_cov_33.8699 . mRNA 2559 4898 . - . ID=g10695.t1;Parent=g10695;Name=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 4796 4898 . - . ID=g10695.t1.exon1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 4796 4898 . - 0 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 4389 4524 . - . ID=g10695.t1.exon2;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 4389 4524 . - 2 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 4132 4192 . - . ID=g10695.t1.exon3;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 4132 4192 . - 1 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 3682 3824 . - . ID=g10695.t1.exon4;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 3682 3824 . - 0 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 3307 3412 . - . ID=g10695.t1.exon5;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 3307 3412 . - 1 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 2926 3069 . - . ID=g10695.t1.exon6;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 2926 3069 . - 0 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . exon 2559 2797 . - . ID=g10695.t1.exon7;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . CDS 2693 2797 . - 0 ID=cds.g10695.t1;Parent=g10695.t1 NODE_2790_length_5119_cov_33.8699 . three_prime_UTR 2559 2692 . - . ID=g10695.t1.utr3p1;Parent=g10695.t1 #PROT g10695.t1 g10695 MEDLAAAAEEVPVVRLGDASIASPFTSKVASIVAVMHILRQGRCTLVTTMQLFRILALNCLIMAYSLSVLYLDGIKFGDVQATFQGILLAMCFLFISNSKPLSRLSSERPLPNIFNAYMILTVLGQFAVHMCSLVTIVDVAKQITGDRGEIDLEAEFKADTLNSAVFFIAMTMQLSTFAVNVKGHPFMEGIAQNKPLLYTLSISGLVVIATASGYAPELADTLQVVAFPDHFRDLVIKTMVGDLVGAFVVDRVLFFLFGRRHARI* # ORIGINAL: g10694.t1 original gene structure, not modified by PASA NODE_2790_length_5119_cov_33.8699 AUGUSTUS gene 69 2430 . + . ID=g10694;Name=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS mRNA 69 2430 . + . ID=g10694.t1;Parent=g10694;Name=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS exon 69 296 . + . ID=g10694.t1.exon1;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS CDS 69 296 . + 2 ID=cds.g10694.t1;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS exon 629 753 . + . ID=g10694.t1.exon2;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS CDS 629 753 . + 2 ID=cds.g10694.t1;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS exon 1064 1226 . + . ID=g10694.t1.exon3;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS CDS 1064 1226 . + 0 ID=cds.g10694.t1;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS exon 1678 1922 . + . ID=g10694.t1.exon4;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS CDS 1678 1922 . + 2 ID=cds.g10694.t1;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS exon 2311 2430 . + . ID=g10694.t1.exon5;Parent=g10694.t1 NODE_2790_length_5119_cov_33.8699 AUGUSTUS CDS 2311 2430 . + 0 ID=cds.g10694.t1;Parent=g10694.t1 #PROT g10694.t1 g10694 VLDFETPAGLTLTFLKRITAHFHRSIKLAIPSPSKSIGFVFTSKPEDESAPEEETHEDALFEKMDVVADAKNFARDFKLASYLYEDGSLEALYEHRWSPRWRTRVSGISSFVPNTSHMNLMAHYDAPTWAGRLLFMTDETMIGFSGLKSIGKSGWAAGAEIVYTIKQEAPGISLGVRHTSRPNTFGRRNILTGTFSPISGHVTATYASAITEALSASTRYEYNVHSNESDFATGMCYDPPGPFVARARVDTAQGLAVLLEAHIGQVVVAVGAMCTFPPKVESSFGIEVQLHS* # PASA_UPDATE: g9748.t1, single gene model update, valid-1, status:[pasa:asmbl_98,status:12], valid-1 NODE_1029_length_14552_cov_43.3921 . gene 7356 14235 . + . ID=g9748;Name=g9748.t1 NODE_1029_length_14552_cov_43.3921 . mRNA 7356 14235 . + . ID=g9748.t1;Parent=g9748;Name=g9748.t1 NODE_1029_length_14552_cov_43.3921 . exon 7356 13955 . + . ID=g9748.t1.exon1;Parent=g9748.t1 NODE_1029_length_14552_cov_43.3921 . CDS 7356 13955 . + 0 ID=cds.g9748.t1;Parent=g9748.t1 NODE_1029_length_14552_cov_43.3921 . exon 14089 14235 . + . ID=g9748.t1.exon2;Parent=g9748.t1 NODE_1029_length_14552_cov_43.3921 . CDS 14089 14235 . + 0 ID=cds.g9748.t1;Parent=g9748.t1 #PROT g9748.t1 g9748 MHEAKCIHLILFVFIQVAIASVGSSSEQSSWNGDLTLRPPNDPNERGFHSAPLWTPEVGGDVGSERRRDSHVHVAQRDIIFAHIKRAYTVESRVTTDPHQRTTRENNVIEVSAVSSETVVGVLVRLYLDNIQRISEDASGDPELEYTVSFPSESELTPDGSYPFLNWADPTEIGVALGQIPLSFGMRTVVNFNSVQSAIGSTGKRTRWTLACGGFQLPSLFLSGGQWKFSGIHISQCPEVASPPSLDQNSSPASPLARLFVVSGGVTLALDDWVVTDLFHSLVLAAGGTASISSSSVSGTRYYSGGGALGASSFMGTLSVTNCTVTNASSALSGGVVVAESGGSITIENSRFVGVGCIVEDNGGASPVAYSCHGGAFAALDAQLYARSVDVTGAKSRGNGGCVSVEGASSVAALDSSFSFCIAAVSGGFAAAFAGVSTTTPTLKVEQCRTANTSAVFGGALGVLAGSVIVRSSVFAGHTVTDAGGFAHVGGTATLDVDDTDVSESTASSPSGGGGCVAAVEQASVRLTTVRLHACAAALGLGGAVFARGSSVVSMTSCSVTGRSARPEDVASQFGGAAVVTDAATLSGTNLTIVGVYVARAGAVLFADVDARVSLEGCVISNVTAAQLGGVVHAGGNSRVNISRVDVSRVSAQGGCLASTAGTVRLLCTRCNVYNVSASFGGVVYAAASSVVVVSSIDVAYASSTFGGGMAYVVGNARLVVEGVRGRSLSALSIGGGVLYAADAATVLFDGVDVEDVSVSGSEGCGGFARIVGDANLTVENAPNVRTVSANNGGFVCAEGATWARFENVTLESVTASVQGGAFYLRNECRVSCNRCTGASIYVDSPSGGAGTSGGVVSLDDGAQFDLTMASFSDVGAVSGGFASVSGSSTLRMAKCGVRNAHASVIGGVFKAVGAFATIDVRTSLFTGVGVQSGAGTSSSCEPTGSRFGGFAYAAIGATFLLSDSSLSFITGAEFGGVLSAHSGSRVVLQRTNISDFMAELCGGLAYVEGGRATTTSLTIVNSTVQGGLNGLRASGITADANGGLSEVVLDGVTLVGLQAQQYSSAAVSSVITASCVAANDNVHVRILRSQIDGAVGTCLLLNGLSVTASVTGTRLSDMQGAGLSSGNAAVEGIVASVANGASLAMKNCSTSHVREVSWLALAIVHVGTWGAFVAEECTFAGVAFALPDSAIVRTRNAQSVRLLRVAFNNIRMFGNRGGAVVLEGGYSGEFEITDCSFVNITSAGSGAAVSVQGSDGGVQVSSMTLRIIRARFEDISATGNGGAISLIATQAANTSDGSQRATPLYVIVFECTFLRVKSLLGVGGAIFAQDVNRFHANNCTFERCNSLGNGGAIQFNVVIVAADVLVNATRFVNCRAGASGGAVSVSMQPSAIDGSPIGLLPISIYSCNFEGTSAVDRGGALYAEGISNSVGSGDLPSIVASLNCTFVQCKANAGAVLAMSVQNMLGTLKGARVGDARATEDGGVVIVLDGTLRMIDVHVEGAWAVGGIGGIVAMRRGSVSFENGTVVSAKASRGGAFAMIVGDEDGAGMGAARRRALLQSQSSLTVTDSSFAGLSSLEGGLVYASGAFARVTVGPSVCVEGVDAMSNGGVFHVRTGAQVDITNATFAVVTSASGGFGYVTDASSLSASGIVVRNCSVSDRGGLAFVSGGSFFACNNCTAGNISARSDGGALFLEDTARTVVVGMRARGISSSRSAGFAYLDSSAVEVSNSTFTEVSAVRMGGFLAAYGSTVNITDVTMSQLNAVKGSRILDGLGGDEAFGHGGAFMVVGSTLSVLRTSIESPASLDGYGGAFAVMSSQAHLSGVNVTNARAEQGGAVYLGSDSSLTATACVFTDASAKTHGGCVFVGDNSTLGMSDVLLRGCDAGLAQDKYGAGGALYLSAHASLSPTFFDRIRVEGARAMLGPGVYALGTDAALVANTALDGRGLVVNNARAWQNGSLDATGGSVSGPAVRFLVSPLSITVSTDSPFFMNFTAVDSRGTAVSSPPSASLAIALGLESYDSVAGVWKTVGGGLSGDVERTFARTPMVQFESLRAMVVSGSYRVRVHSANLLYSTTSPLFDVTVPIAVTDCETGLVASQYNGTSNTQLARCVPVTVDGASETATTKSDNLPVALGVGIPIAFVVLVGCFAIVRWQLAIARKKQSAEVQRKFIESHVLKNTALDKLEIARDCIELMGNLGEGEFGVVFQARLVMPSSRPRMCAAKSVKEGAPMEEVGILSHCHHICFKH* # PASA_UPDATE: g9746.t1, single gene model update, valid-1, status:[pasa:asmbl_101,status:3], valid-1 NODE_1029_length_14552_cov_43.3921 . gene 547 1609 . - . ID=g9746;Name=g9746.t1 NODE_1029_length_14552_cov_43.3921 . mRNA 547 1609 . - . ID=g9746.t1;Parent=g9746;Name=g9746.t1 NODE_1029_length_14552_cov_43.3921 . five_prime_UTR 1541 1609 . - . ID=g9746.t1.utr5p1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . exon 1467 1609 . - . ID=g9746.t1.exon1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . CDS 1467 1540 . - 0 ID=cds.g9746.t1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . exon 1275 1378 . - . ID=g9746.t1.exon2;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . CDS 1275 1378 . - 1 ID=cds.g9746.t1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . exon 1004 1137 . - . ID=g9746.t1.exon3;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . CDS 1004 1137 . - 2 ID=cds.g9746.t1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . exon 547 836 . - . ID=g9746.t1.exon4;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . CDS 621 836 . - 0 ID=cds.g9746.t1;Parent=g9746.t1 NODE_1029_length_14552_cov_43.3921 . three_prime_UTR 547 620 . - . ID=g9746.t1.utr3p1;Parent=g9746.t1 #PROT g9746.t1 g9746 MADLKRVEALITTHPDFPLPGILFRDIFPVFRDPVATELIFTNLVFHLTSTYHKIDVVVGLDSRGFLFGPIIALRLGASFVPIRKAGKLPGKKETVTYAKEYGADSFEIQSDAILPGQTVVIVDDLLATGGTMFAACSLVRKLGGQVIECMVVVELAELNGSQRLDVPTYSMLKY* # PASA_UPDATE: g9747.t1, single gene model update, valid-1, status:[pasa:asmbl_100,status:12], valid-1 NODE_1029_length_14552_cov_43.3921 . gene 2111 6747 . + . ID=g9747;Name=g9747.t1 NODE_1029_length_14552_cov_43.3921 . mRNA 2111 6747 . + . ID=g9747.t1;Parent=g9747;Name=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 2111 2155 . + . ID=g9747.t1.exon1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 2111 2155 . + 0 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 2377 2547 . + . ID=g9747.t1.exon2;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 2377 2547 . + 0 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 2844 2887 . + . ID=g9747.t1.exon3;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 2844 2887 . + 0 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 3078 3246 . + . ID=g9747.t1.exon4;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 3078 3246 . + 1 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 3685 3892 . + . ID=g9747.t1.exon5;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 3685 3892 . + 0 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 4243 5605 . + . ID=g9747.t1.exon6;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 4243 5605 . + 2 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 5827 6028 . + . ID=g9747.t1.exon7;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 5827 6028 . + 1 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . exon 6328 6747 . + . ID=g9747.t1.exon8;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . CDS 6328 6621 . + 0 ID=cds.g9747.t1;Parent=g9747.t1 NODE_1029_length_14552_cov_43.3921 . three_prime_UTR 6622 6747 . + . ID=g9747.t1.utr3p1;Parent=g9747.t1 #PROT g9747.t1 g9747 MASVEAAFLQSFTAQGASLPDVVRDSLDDWVQRPDVYRLWRQHFARSVPGPEEVGRNMVRWLLMWYNRYPMLECIERFRLFKVLADWLLSGRCPKGYYADCEAVIALQPMHDILRMSLVDVGVLGTWLDSKTGSSTWQASDENELLRLSYHPPDIIYENVLKALVVSTATRSDVYIAVLDAIEKFVMCVEGGRQKTDQAMLNKAQWLLDLTLSSIEEYPPTPLILPILYDRAMRSAKLGDLDPIGDSPDLALIRSVENSLLRLAGSLPDVSRHNDYAGQAQQFHIPMPAPSTFMRLVVEKEGEAFRGAWENGVGGEKPPSGANVADHISAKSRRSRALESWLDTDEFLLAIGGVGTNASTAMDDGGKGKRGSTRAGRTSLAYQPVGMIPTDIDVPLPRGTTLEDIMCVTQSVWLQVDPKPDRILLSARETAPPSNELLVSPVPGSLFFTLDSMQWMGPSLRIPIVHDEPLSPSSHSANIHPSMQNSDTGGSHQHQSLSEESSFERRNEPGLILEYSRISHFSFGQLFDDERKINMDDDEEYTQPTSRPVSARERPRTAGARSPPMYHDGGQDVPGGNGEVPHPYESGGKVSVTFDEPGNLVQDDSTLYYIVLHETETFKFFPFYENEVHQIMSLLTETTGLGPYNDADFVREVLSSRVDGARLSILRQLESQEHPWIERTPDLERLISSLIVENKPQSLLEMERLYHSCRLEREVTKEAIHMLRRSWLETHSEKVRLKIISILDRLLDRAVIHPRDPSFMRLMEWLRYAEKNLDPYKSAESLKNIVELIGRADDIKKQKLMPLNQTELPSMFDYWEQYKTYRQKDPQRLFK* # ORIGINAL: g8687.t1 original gene structure, not modified by PASA NODE_2220_length_7189_cov_37.5488 AUGUSTUS gene 1561 1794 . - . ID=g8687;Name=g8687.t1 NODE_2220_length_7189_cov_37.5488 AUGUSTUS mRNA 1561 1794 . - . ID=g8687.t1;Parent=g8687;Name=g8687.t1 NODE_2220_length_7189_cov_37.5488 AUGUSTUS exon 1561 1794 . - . ID=g8687.t1.exon1;Parent=g8687.t1 NODE_2220_length_7189_cov_37.5488 AUGUSTUS CDS 1561 1794 . - 0 ID=cds.g8687.t1;Parent=g8687.t1 #PROT g8687.t1 g8687 MEPQPSVGVNPPQDHAALNGVDPRTLTNKPIIGVYRVQDPDEVWYVGLGALKVLAMLPCFWVFCPVMGPCICSKLTV* # PASA_UPDATE: g8688.t1, single gene model update, valid-1, status:[pasa:asmbl_3802,status:3], valid-1 NODE_2220_length_7189_cov_37.5488 . gene 2356 5586 . - . ID=g8688;Name=g8688.t1 NODE_2220_length_7189_cov_37.5488 . mRNA 2356 5586 . - . ID=g8688.t1;Parent=g8688;Name=g8688.t1 NODE_2220_length_7189_cov_37.5488 . five_prime_UTR 5416 5586 . - . ID=g8688.t1.utr5p1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . exon 5258 5586 . - . ID=g8688.t1.exon1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . CDS 5258 5415 . - 0 ID=cds.g8688.t1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . exon 4809 4954 . - . ID=g8688.t1.exon2;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . CDS 4809 4954 . - 1 ID=cds.g8688.t1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . exon 4338 4482 . - . ID=g8688.t1.exon3;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . CDS 4338 4482 . - 2 ID=cds.g8688.t1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . exon 3814 3930 . - . ID=g8688.t1.exon4;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . CDS 3814 3930 . - 1 ID=cds.g8688.t1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . exon 2356 3450 . - . ID=g8688.t1.exon5;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . CDS 2559 3450 . - 1 ID=cds.g8688.t1;Parent=g8688.t1 NODE_2220_length_7189_cov_37.5488 . three_prime_UTR 2356 2558 . - . ID=g8688.t1.utr3p1;Parent=g8688.t1 #PROT g8688.t1 g8688 MDNSPTCEADSVDDIRRRGVCVNDVGTQQEASDDTRQTRAARHGRGWSVEEISALREGVAQHGVGSWHVIQTSQPALSLRTAAQLGDKWRNIALQRRRTDLPPRKFALLREDHTLFRIRGRPIVFGKAAGGKGIGRVRLPRDAALRAASRPEIYANGEVTCRIYIREIVQKCRGASGPPAARKTKRTTVYVYEGSRSRMVPPPNAGKIAQRGIAWRPSVHFVRKEPLRVGRFAVQSLNPSRTTANSIEQGILTVACATSDTQGRSPSSSALIRERLLRRLQATSTPVPLFRDSVVGHEIVAASVADDGPCVRGTTVAIGNMSGGNSGDLNAVNGLAAHAPVSASNVHMHAVADPLYEDGEGWEGAFEAEDEFDVDGNFIGDDGDDHDEYEDDDAVEDEDEDEGALAAAFMHGGDDVDILFATDDPFFLEGEDEDDGETHKSDSGEQLQSASADTLCNSSLGDHAFGRGHRHVRARLRRTSLARYL* # ORIGINAL: g11331.t1 original gene structure, not modified by PASA NODE_3321_length_3738_cov_59.3249 AUGUSTUS gene 2879 3738 . + . ID=g11331;Name=g11331.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS mRNA 2879 3738 . + . ID=g11331.t1;Parent=g11331;Name=g11331.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS exon 2879 3053 . + . ID=g11331.t1.exon1;Parent=g11331.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS CDS 2879 3053 . + 0 ID=cds.g11331.t1;Parent=g11331.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS exon 3357 3738 . + . ID=g11331.t1.exon2;Parent=g11331.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS CDS 3357 3738 . + 2 ID=cds.g11331.t1;Parent=g11331.t1 #PROT g11331.t1 g11331 MRRTAVAFGIHPNGFSLHNIARVPLEQLSRRADGGVCSVGEMGLRAGSTLFLIPKMTSDKSGGGVGATTPATSTLTSTPQDVSLPEGIAKNRQTAEVRTNESNDANADATATAVPVVASVRLGKSVGVAAATHCGSCPKRLNGAMRHSCRCGGEYCVTHRHPESHRCTFDYKAHGRAQLAKDNPL # ORIGINAL: g11330.t1 original gene structure, not modified by PASA NODE_3321_length_3738_cov_59.3249 AUGUSTUS gene 60 1160 . + . ID=g11330;Name=g11330.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS mRNA 60 1160 . + . ID=g11330.t1;Parent=g11330;Name=g11330.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS exon 60 426 . + . ID=g11330.t1.exon1;Parent=g11330.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS CDS 60 426 . + 0 ID=cds.g11330.t1;Parent=g11330.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS exon 535 1160 . + . ID=g11330.t1.exon2;Parent=g11330.t1 NODE_3321_length_3738_cov_59.3249 AUGUSTUS CDS 535 1160 . + 2 ID=cds.g11330.t1;Parent=g11330.t1 #PROT g11330.t1 g11330 MDQSQIVNIDLTGSATGITFFNPSATPPAMPATPDDKISVSVCTPLRMHPIPVSLSATDSHHDIMRRTADALGIPPDSFSLHNIARVPLEQLSRRADGGVCSVGEMGLCAGSTLFLMPKMTSGGVKRSAIGSPTCTPEVIQAVRQLTEADIQKLFHGEPVILCVTMGDKRYAVKISMLPAALANKLREARNMAAHGATPSPTTPNATTPISTLTPASSAALLKRAAKYFGQTKKSDKITNANTDATANAVPVIASGRVGKSVGVAAATHCGRCPKRLKGAMRHLCRCGGEYCVTHRHPESHRCTFDYKAHGRAQLAKDNPLICADKITKI* # ORIGINAL: g3083.t1 original gene structure, not modified by PASA NODE_5198_length_972_cov_27.4682_potentialcontaminant AUGUSTUS gene 466 936 . - . ID=g3083;Name=g3083.t1 NODE_5198_length_972_cov_27.4682_potentialcontaminant AUGUSTUS mRNA 466 936 . - . ID=g3083.t1;Parent=g3083;Name=g3083.t1 NODE_5198_length_972_cov_27.4682_potentialcontaminant AUGUSTUS exon 466 936 . - . ID=g3083.t1.exon1;Parent=g3083.t1 NODE_5198_length_972_cov_27.4682_potentialcontaminant AUGUSTUS CDS 466 936 . - 0 ID=cds.g3083.t1;Parent=g3083.t1 #PROT g3083.t1 g3083 MAQSEVDTAVIGLIQSRKALTTSVANDGSRAFGDRLSPYGYDWRAKEIAVLERGVTKEQLLNLYREVISNKSDSRRGVAVFVNSASLPEEGLDYSSAVQLPAMKKSLEVEKNDEEAVADTKLVMNTFAEPTSVKFSLIDSKAATRNASDRHTVNIL* # PASA_UPDATE: g1023.t1, single gene model update, valid-1, status:[pasa:asmbl_8907,status:12], valid-1 NODE_694_length_18946_cov_47.833 . gene 133 3942 . + . ID=g1023;Name=g1023.t1 NODE_694_length_18946_cov_47.833 . mRNA 133 3942 . + . ID=g1023.t1;Parent=g1023;Name=g1023.t1 NODE_694_length_18946_cov_47.833 . five_prime_UTR 133 134 . + . ID=g1023.t1.utr5p1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 133 263 . + . ID=g1023.t1.exon1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 135 263 . + 0 ID=cds.g1023.t1;Parent=g1023.t1;5_prime_partial=true NODE_694_length_18946_cov_47.833 . exon 431 586 . + . ID=g1023.t1.exon2;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 431 586 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 792 875 . + . ID=g1023.t1.exon3;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 792 875 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 1002 1043 . + . ID=g1023.t1.exon4;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 1002 1043 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 1387 1578 . + . ID=g1023.t1.exon5;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 1387 1578 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 2224 2274 . + . ID=g1023.t1.exon6;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 2224 2274 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 2440 2535 . + . ID=g1023.t1.exon7;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 2440 2535 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 2758 2868 . + . ID=g1023.t1.exon8;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 2758 2868 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 3050 3180 . + . ID=g1023.t1.exon9;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 3050 3180 . + 0 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 3314 3472 . + . ID=g1023.t1.exon10;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 3314 3472 . + 1 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . exon 3667 3942 . + . ID=g1023.t1.exon11;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . CDS 3667 3859 . + 1 ID=cds.g1023.t1;Parent=g1023.t1 NODE_694_length_18946_cov_47.833 . three_prime_UTR 3860 3942 . + . ID=g1023.t1.utr3p1;Parent=g1023.t1 #PROT g1023.t1 g1023 VHCTHGFNRTGYMIVSFLVEQFMWGVEGAIARFAQARSPGIYKRDYLQVLCQRFDGVPDQIVIPEYPNWDELAYPSSAVNPRKRPREDGDSDAPGTAFAIPDLAGVVPVLGERRTEILYRVCALCKWKGLGLFPGSQPVSLDKRNLKFIAEEPYKVSWKADGTRYMMLIDGTKGTFLIDRNEAVFEVKNAVFPFRKDHKILVKDTLVDGELVVDIIDGVRRPRYLMYDAIVLMKYPVGEEYYSKRLESIELELIRPRADVAKSAGGIAPSPFGIHLKQFFPIELVEKVLHLKLQHETDGLILAPSHRRYECGRCDRLLKWKPADMNTVDFKLWVDREEKEGMLTKTVGRLLVGGQGGEPVQAGLLAGMPLDQMRRYDGKIIECRYENGSWLFMRERTDKPHPNGMNTFNGVLRSIRDGLTEQALIDFVHTILKKDGTGSNSTAAPPT* # PASA_UPDATE: g1024.t1, single gene model update, valid-1, status:[pasa:asmbl_8908,status:3], valid-1 NODE_694_length_18946_cov_47.833 . gene 3950 7292 . - . ID=g1024;Name=g1024.t1 NODE_694_length_18946_cov_47.833 . mRNA 3950 7292 . - . ID=g1024.t1;Parent=g1024;Name=g1024.t1 NODE_694_length_18946_cov_47.833 . five_prime_UTR 7233 7292 . - . ID=g1024.t1.utr5p1;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . exon 6866 7292 . - . ID=g1024.t1.exon1;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . CDS 6866 7232 . - 0 ID=cds.g1024.t1;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . exon 5525 6779 . - . ID=g1024.t1.exon2;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . CDS 5525 6779 . - 2 ID=cds.g1024.t1;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . exon 3950 5349 . - . ID=g1024.t1.exon3;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . CDS 4059 5349 . - 1 ID=cds.g1024.t1;Parent=g1024.t1 NODE_694_length_18946_cov_47.833 . three_prime_UTR 3950 4058 . - . ID=g1024.t1.utr3p1;Parent=g1024.t1 #PROT g1024.t1 g1024 MVDVSTEVRAGLLWAGRPSAKMGRSLTDLSNAQRMSPFGGSLSISDLTALRTHTLSASNLAALSDARLSLKAALPIHSYNTPNTEGATSRVHFECLVKRYFRQLTVGCGMLSCANPFCFSSKNCRSFSPDVAATLSIFLASRPGQRLCDHLPEGSPPPVPRSAFLPSAERQTQTPRRYDNGGVPSTPGAAETNRAVAPRRPFLHMVFSSSPFAGIYHQPKLRGARSVPNMRAWIEGDENVVLSDSAFSCSDASADEGDNDEAIFGAADPNDHSGGCTSDSDSDFDGRLRPQFSGGLSLTHLTLPLLESAIGTYEVSGDATFLVSSIRTVFSSSESLNASFTVADASQLAQTAEVPLQTPAPLDMQAVRHAYKALLQLEPRSLFEGTLANATAILLSRLESSPPRSAAEARQLCIVLESPLLAQRATNEPLLRKFCAILCSLPPAPAEAFVALVSRFPAESMVRAVRMLQAHLSTRVHPTRLRDESLVAAVVAVGLLHDANERGKGIVPFSEFHNESICRKIDFKEEYAVWRKMKNGGHLWGRDNRPALILHNGFSFLDHPYLLDPAAKSRVMHIDAVVQMSRMFEDAFVRSAWVFQAQKMLADARRDIGLSSVLKEYTSLYLVLEVRRDHLIEDTLNQISHRRNDLKKPLKVKYVGGGEEGLDMGGVQKEYFQVIIDRIFDPEYDMFRYCDETRNFWINGRSLESDREFELVGVVLGLAIYNGINLDVHFPMVVYRKLLGHVPDMDDLRDAQPTLAKGLQALLDFDGDVEGVFCRTFRIEEDSFGVHRYVDLVPNGDDVPVTTENRGEFVRAYVKYLLGDSVRRQFAAFARGFHAVCGGDALRLCRPEELEMLVCGSPDLDFDALQRATQYDDGYHANHPVIRHFWSIVHGMSLESKRKLLVFVTGSDRVPIRGLSNLTFVIQRNGPDSDRLPTALTCFGRLLLPEYASREKLENRLVTAIENGKGFGLV* # ORIGINAL: g1026.t1 original gene structure, not modified by PASA NODE_694_length_18946_cov_47.833 AUGUSTUS gene 11909 15441 . + . ID=g1026;Name=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS mRNA 11909 15441 . + . ID=g1026.t1;Parent=g1026;Name=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 11909 12001 . + . ID=g1026.t1.exon1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 11909 12001 . + 0 ID=cds.g1026.t1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 13081 13206 . + . ID=g1026.t1.exon2;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 13081 13206 . + 0 ID=cds.g1026.t1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 13922 14073 . + . ID=g1026.t1.exon3;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 13922 14073 . + 0 ID=cds.g1026.t1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 14206 14345 . + . ID=g1026.t1.exon4;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 14206 14345 . + 1 ID=cds.g1026.t1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 14704 14846 . + . ID=g1026.t1.exon5;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 14704 14846 . + 2 ID=cds.g1026.t1;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 15049 15441 . + . ID=g1026.t1.exon6;Parent=g1026.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 15049 15441 . + 0 ID=cds.g1026.t1;Parent=g1026.t1 #PROT g1026.t1 g1026 MGKQRIIIDTDPGVDDALALVLAIACQDIELVGVTITHGNSHDIDMLARNACFILEECGVKGIPVVKGAAFAMRPEFAVLSELTVRIHGNNGLGDIAIKDTPLHALSHPYHDTASAHTLCRNTKNRAAQFMIDLCEKHPGEITIIAIGPLTNVGEALAACPALSKTVKHIVSMGGSLDHFGNRTPVAEANVADDPFAARLVYHSGADVVIVPLNITRQVSMTAEFLVSLNSTCGGIGELLHHMVRHYRDVLLQLGSNACPMHDAVAVLFVANPDLFGKGAVPLYVDVECSGELTRGMTVADWNGRFGKKCNVRALIDVSTNACLDFFLEHVRDFSLKHPNKSVNTSWN* # ORIGINAL: g1025.t1 original gene structure, not modified by PASA NODE_694_length_18946_cov_47.833 AUGUSTUS gene 7786 9438 . + . ID=g1025;Name=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS mRNA 7786 9438 . + . ID=g1025.t1;Parent=g1025;Name=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 7786 8094 . + . ID=g1025.t1.exon1;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 7786 8094 . + 0 ID=cds.g1025.t1;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 8380 8521 . + . ID=g1025.t1.exon2;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 8380 8521 . + 0 ID=cds.g1025.t1;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 8793 8917 . + . ID=g1025.t1.exon3;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 8793 8917 . + 2 ID=cds.g1025.t1;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 9214 9438 . + . ID=g1025.t1.exon4;Parent=g1025.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 9214 9438 . + 0 ID=cds.g1025.t1;Parent=g1025.t1 #PROT g1025.t1 g1025 MTTNIELTHVGDSGPDHENMPPQIRKQGWWRKGGDELRKTWTEIVLHYKERPLAWPVLVVLLTAFGGYVAALVIFSGSIAKNSGMFIDYTGAVTMYDSIATATEFSDLADYGYDFADPSGDEVPIMNLDILFGKFEPGNTGASINVIINFYPPTDYIQSEYPPKMNDSFTMYVDSSFQTFEKGKPIVEYSAPVRSENGNLLLYPFDTYKFRIEMYPLYPATGEYEFLMQALVNTQDVGIFTVEVTPFSSEDTAFRGIEVGFCSQHS* # ORIGINAL: g1027.t1 original gene structure, not modified by PASA NODE_694_length_18946_cov_47.833 AUGUSTUS gene 16392 17801 . - . ID=g1027;Name=g1027.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS mRNA 16392 17801 . - . ID=g1027.t1;Parent=g1027;Name=g1027.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS exon 16392 17801 . - . ID=g1027.t1.exon1;Parent=g1027.t1 NODE_694_length_18946_cov_47.833 AUGUSTUS CDS 16392 17801 . - 0 ID=cds.g1027.t1;Parent=g1027.t1 #PROT g1027.t1 g1027 MIENGRQLILITAALAAVAFAVRVDGAYASGQFQSGPTDCVVSSECHVVRHSVGIGLARAVVGVHGRPALGFIKDNTGSGGERRLMYTRANDVHGHTWGEPVDPLGSLVGEPSILDMAVVDGHPAIAFVMQFGDTSPVYYTRALNKVGRRWGRPHKITDGTEILDPRQLGFVSQYGISLADVGGRPVVCVAKQFKFVTESTRALARACFEATESRGRYWKGIPEYFGLTLPPVLGFIPARGTGISLTEVKGAPGLAFGREILGEGLGSGNFSSILQFQRNDEIDVVDASPPGVGFGGEYRNETGLHPSISVIDGRPAVAYLERSAVVNFDAITLKYIRANDPYGNAWPVSYYVTVGSDLAALGASPSLANICGRPIIALVRDSPPSVLSIREVELVRGLDADGSLWESPVVATHGLDILEMTRIATITRDRAGLAVVDGSQGRGQYQGTIVYLSIRCGCEPYERSASHC* # ORIGINAL: g13821.t1 original gene structure, not modified by PASA NODE_679_length_19165_cov_41.5405 AUGUSTUS gene 17251 18072 . - . ID=g13821;Name=g13821.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS mRNA 17251 18072 . - . ID=g13821.t1;Parent=g13821;Name=g13821.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS exon 17251 18072 . - . ID=g13821.t1.exon1;Parent=g13821.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS CDS 17251 18072 . - 0 ID=cds.g13821.t1;Parent=g13821.t1 #PROT g13821.t1 g13821 MAHLTVLTWNIDGLSNELFLAERLMWVLETAKTHRTSIVCFQEVIPDILSIAVGAMKSAGYVCVQPDRLGPYFNLLFVRTDAYDIISSRTIVFRSSQMGRHAIVCRVRAKGVAAYSQHTATIITSHLESTGPAKAERISQLKQAFDVMAQCIPADSVVVFCGDMNLRDSEINGMPSASRPDGLFDAWEAHGSVQKTKYTWDMSINKNLAMNGTPKCRFDRVFVLPAQRPTDWRVHNFSLVGTEAIENLAVHPSDHFGVLVDLVHAPAAPIVID* # PASA_UPDATE: g13818.t1, single gene model update, valid-1, status:[pasa:asmbl_8835,status:3], valid-1 NODE_679_length_19165_cov_41.5405 . gene 9341 11702 . + . ID=g13818;Name=g13818.t1 NODE_679_length_19165_cov_41.5405 . mRNA 9341 11702 . + . ID=g13818.t1;Parent=g13818;Name=g13818.t1 NODE_679_length_19165_cov_41.5405 . five_prime_UTR 9341 9628 . + . ID=g13818.t1.utr5p1;Parent=g13818.t1 NODE_679_length_19165_cov_41.5405 . exon 9341 11702 . + . ID=g13818.t1.exon1;Parent=g13818.t1 NODE_679_length_19165_cov_41.5405 . CDS 9629 11140 . + 0 ID=cds.g13818.t1;Parent=g13818.t1 NODE_679_length_19165_cov_41.5405 . three_prime_UTR 11141 11702 . + . ID=g13818.t1.utr3p1;Parent=g13818.t1 #PROT g13818.t1 g13818 MHHRRAGAHTLLPQNKLNRNNAAVETLAFPRVFRSTFPLCRRNSYCADTRNSHGLHSRHACQTTPGRENKRPLTTHDSDPNLKEGESTPHLLKIHNGFVSRKKKLIALCKEHITRIKMLHRQPFAVASTGLCVPAAYDTKSIVDSSLLLSFAHIACSEATQQATESGKYHAKQEPEDSAIPFGRPGRPSSKPIDIPRRTSMSSEDSASSLSEDDAEDDEDAEDDDDYPSPPSSPPRHAHIMDSPPHPEECYSPSYPSAGFGGFMDRRRSFADYSAGSPSDADARSPPDSLCVPVARSPCSYSDSEMAVKAIVDASKHLAPPSKRASATSATDALAKRRRDAVVPRVPLGRDKGTSRDASSGHVRRLLPSGRVSKRRLYVCNLQGCGKSYMKSSHLETHVRTHTGEKPFMCSADGCHKRFSRSDELTRHVRKHTGVKPFTCATCGRNFSRSDHLTTHIRTHTGEKPFECGYGGCNRKFARSDELNRHARVHAKPKSPLGSLSSK* # ORIGINAL: g13817.t1 original gene structure, not modified by PASA NODE_679_length_19165_cov_41.5405 AUGUSTUS gene 5089 8328 . - . ID=g13817;Name=g13817.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS mRNA 5089 8328 . - . ID=g13817.t1;Parent=g13817;Name=g13817.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS exon 5089 8328 . - . ID=g13817.t1.exon1;Parent=g13817.t1 NODE_679_length_19165_cov_41.5405 AUGUSTUS CDS 5089 8328 . - 0 ID=cds.g13817.t1;Parent=g13817.t1 #PROT g13817.t1 g13817 MEDPVALLRRLLAQLASRAKQKVLDASAEAVQLAIDAGVAISFPPPPPEQRRRSRSASSTPKHSTGNGRFETTGGQYGSPSHNERHMFPRDPLGSDVPPEDGAALEAERELFCILPHLYATVNEVLLEYLRWRRKLDDGQTDLRIGDDIQNAETAFLVEQTENVRRRAVIAMRACRVVSKSINGYRPHLSLMLQKPLVDSGLVNSACKLLLMERDSDDPLVSLAVTALLKRCTRHHSGGLHAIDAMYAVANETTWVDVLLRWAEMDRPSCKSVAWNMVVAFSDDQSGNHFNFDEIVDWTGPPRTELIDKLKRVTALLVQALTLRSRAPACLRMQERLLEAVSTVFLNPEMPSLLVDAHIHDRIAAIGRDKTRSSRLRAVALDSLSNVVFFPDLESRLISRMVPRAAMRLLRLYPLHPPGSTAGIAAKGASGVASGNGYEGDIDCDGDGDSEDADSDWGGDAHDNENGSSDADSDIFMPVASAFYSSDWVQIESNGLADQSTARILDGDLNRFADLFTRVSIHDVGNDSSNDGSNVNDGSNDGGSNNVSEPISCDSTAPHLQGTGVSPSELCASPSHTAPSAQCPAMHPSTCVPANPTHPHSHQPALSDVPNGYPAHTSGSILVGAPDGLSIEQDDDHTCKTPASPATHSGGNGHLAADTSDGAAPGSLLGTADREALSDGASAFFKDNSGQMGSASSGESIGESIGQGTGQTSGESDGQGNANGGALNSQEASEDIWMDDIVGSSSHSAKWSDLDMWSPTAPLAEKHAYGVMWLMRNFVTGIQAAKIQLVSIRSFPHLVRLVADSTFEDVSNALVIVGELGCDKLTLQALGDAGMIEALAQCLPRIFLPLRKATTRFGGYHPTPTPGSGGGGGWAFDAVGEEDDAGDSSTTSEGSNSSNSEESGDDNSAEVMHGEHMQEAVLALTTTLGLLMSIAEVSKVLCERVRVSRGLQICLGLYQSVPKRFKRRPYAVRPRVREFVQRCAADEGRQYVVDMMLSINVVRALVFPLSHRRRVDRAVRLLGDWVALRVLYNPHHPIGRRRIIAEYQELCAEYGRHVPDDPVEDEAGQPGHGAGAEGQ* # PASA_UPDATE: g13819.t1, single gene model update, valid-1, status:[pasa:asmbl_8837,status:3], valid-1 NODE_679_length_19165_cov_41.5405 . gene 11859 14727 . - . ID=g13819;Name=g13819.t1 NODE_679_length_19165_cov_41.5405 . mRNA 11859 14727 . - . ID=g13819.t1;Parent=g13819;Name=g13819.t1 NODE_679_length_19165_cov_41.5405 . five_prime_UTR 14560 14727 . - . ID=g13819.t1.utr5p1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . exon 14007 14727 . - . ID=g13819.t1.exon1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . CDS 14007 14559 . - 0 ID=cds.g13819.t1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . exon 13681 13889 . - . ID=g13819.t1.exon2;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . CDS 13681 13889 . - 2 ID=cds.g13819.t1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . exon 13214 13463 . - . ID=g13819.t1.exon3;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . CDS 13214 13463 . - 0 ID=cds.g13819.t1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . exon 12422 12843 . - . ID=g13819.t1.exon4;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . CDS 12422 12843 . - 2 ID=cds.g13819.t1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . exon 11859 12146 . - . ID=g13819.t1.exon5;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . CDS 12006 12146 . - 0 ID=cds.g13819.t1;Parent=g13819.t1 NODE_679_length_19165_cov_41.5405 . three_prime_UTR 11859 12005 . - . ID=g13819.t1.utr3p1;Parent=g13819.t1 #PROT g13819.t1 g13819 MGSSKRSHSRHRPNEDSGISQDHGRGQVDSTQIPPQHADGGEERENGRDDDQDSALGESVREEVNRESVEHANDGTHERASRSGRTRIRNHSRSRSTRSSKRKAADEQSAAVDDATVDGGNRDDDSAYTTARSDVPRERRQRSSRRRSRLVAPSEPHPSHGGNSREIEQRGDDHEMGDMQQHSVARDADSASQGPPADAVVEIDPLEAEDERAAEERANNNASWSYYSYFTLQEPEVRRVMANGFKKGQILPVKASDLPPEVTGGATPRVLVIQRPVFTVACVVAQVVLFVVAMAADGNESMRTNPWFGPSWDRLMDLGAKWFPDVRSGQVWRLLSAAFIPPGLILLLLSIAFHVAVCAPVERLHGWRRMGAIYLCAAVFASLCSCVFVPANVFVGPSGAMYGIAGVLYCDVVENWPYLASPERDVFVLFAMTVGSLGLGLLPGVDNWAHIGGLFAGVLAGVLLLPNMGMRMSRRRLLIATSAPILVCLYIAAIVTVYAAVSYTSPCAWCRSTTCLPINDWCEI* # PASA_UPDATE: g13820.t1, single gene model update, valid-1, status:[pasa:asmbl_8836,status:12], valid-1 NODE_679_length_19165_cov_41.5405 . gene 15414 16799 . + . ID=g13820;Name=g13820.t1 NODE_679_length_19165_cov_41.5405 . mRNA 15414 16799 . + . ID=g13820.t1;Parent=g13820;Name=g13820.t1 NODE_679_length_19165_cov_41.5405 . exon 15414 16799 . + . ID=g13820.t1.exon1;Parent=g13820.t1 NODE_679_length_19165_cov_41.5405 . CDS 15414 16727 . + 0 ID=cds.g13820.t1;Parent=g13820.t1 NODE_679_length_19165_cov_41.5405 . three_prime_UTR 16728 16799 . + . ID=g13820.t1.utr3p1;Parent=g13820.t1 #PROT g13820.t1 g13820 MNILGRLTLTLVVLFTVSVCTTVALYPDSNGPIKVIHAFSGGDGAKSKGSLSLVQCPPYKQVLYGFTAEGGKFGGGVVFAAGFVGSVVDGASFAVVHDFEVPQTRKSKDQNATDVDGYEPHHGALTPDCKRGLLFGTALGGGSANEGVIFSVGLAPPHTFSVLHAFDAGPKHGGPHSGLIAGADGRLYGVTCSGGDHSSGSLFRYDPDKGSFRTLYSFPSKVSKHGRHPHGSLSMSPDGRHLYGVARYGGFLVNGSEAFGTLFAYDLKKDSVSVLHTFVGGADDGATSEHGGVSSVKLDDGTLYLIGTTTNGGASNVGTLFRVSPDGTDFAVLHSFGNASGPGLTGEHPYGTPIVVGGHVCGTTRDGGVKGKGSVYCVTIGGSWFASTVASFHKNKTGQHPIDNLVQVSGLAYGLTESGGPNNANGTLFSVIMPAAA* # PASA_UPDATE: g13816.t1, single gene model update, valid-1, status:[pasa:asmbl_8834,status:12], valid-1 NODE_679_length_19165_cov_41.5405 . gene 307 4761 . + . ID=g13816;Name=g13816.t1 NODE_679_length_19165_cov_41.5405 . mRNA 307 4761 . + . ID=g13816.t1;Parent=g13816;Name=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 307 385 . + . ID=g13816.t1.exon1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 307 385 . + 0 ID=cds.g13816.t1;Parent=g13816.t1;5_prime_partial=true NODE_679_length_19165_cov_41.5405 . exon 668 831 . + . ID=g13816.t1.exon2;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 668 831 . + 2 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 1007 1291 . + . ID=g13816.t1.exon3;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 1007 1291 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 1642 1818 . + . ID=g13816.t1.exon4;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 1642 1818 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 2096 2263 . + . ID=g13816.t1.exon5;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 2096 2263 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 2563 3384 . + . ID=g13816.t1.exon6;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 2563 3384 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 3647 3904 . + . ID=g13816.t1.exon7;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 3647 3904 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 4071 4174 . + . ID=g13816.t1.exon8;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 4071 4174 . + 0 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . exon 4458 4761 . + . ID=g13816.t1.exon9;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . CDS 4458 4608 . + 1 ID=cds.g13816.t1;Parent=g13816.t1 NODE_679_length_19165_cov_41.5405 . three_prime_UTR 4609 4761 . + . ID=g13816.t1.utr3p1;Parent=g13816.t1 #PROT g13816.t1 g13816 LAAPPSTRLAEFEQHWKSVVGTMCNIGDNVSLSSTGIPGHLGEMVEILAEEEKEAGEMAPCVELLLQSNIIHSLTVFADKDRPVGINRYVLRFLSKMLKTLRQPMLPHVNVHRPLCKLVAECAADRLEGLQREYAEFLGVICDKFVENPALIRFFVAENEDALRRPAGSTASPAPKAAADPSKGFPLFSALVKFMASDDPRVHNKALRAILICLRLPSDTVALFVANHSSACEDVVARLASLHALLPSSFEPQELAQFTSYFPRPLRNDLELGGKYTPVLAYLHWLAICSEISSVSRHPIPAKISRLVATTVIRPMTLPAVRATAESTALTATHYLTLTLRHIGCPVMLDAVIEQVVGAPGDGTPLHSLVVSTPNALHDSATPNAKAVAAAGGDAPGVVGLSSHTGQQSASDAQQQQLAQLAQAQSATRALLIERCDANSVFLARATLLLCDEMLSRHSMRAMETLVWRPLAQVPGLLPGLGVTSAAIATRGYVDGFFARGTHAVVAGFLSVVPEIARVASASQDYSWYFWEAHHNYVEACHVLKACPAIHQYLLRPHDDLADSKADAPTTALCETPPPRDPSEPGEGPFLRILLNKLERMLDEPYEINLVVSSILARIALYPHVLSHAYFLDPSVNLPDGVRSPYQSLRKVAYELNARAQRIDDFSSNLEKTWRTIKDGPDEDDDPIAEYNLQTNGRFIEAALVYGEFCKELAAIALVKAGVVFDDACMMPSVG* # PASA_UPDATE: g9426.t1, single gene model update, valid-1, status:[pasa:asmbl_1635,status:3], valid-1 NODE_144_length_35134_cov_41.685 . gene 21461 25096 . - . ID=g9426;Name=g9426.t1 NODE_144_length_35134_cov_41.685 . mRNA 21461 25096 . - . ID=g9426.t1;Parent=g9426;Name=g9426.t1 NODE_144_length_35134_cov_41.685 . five_prime_UTR 24939 25096 . - . ID=g9426.t1.utr5p1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 24532 25096 . - . ID=g9426.t1.exon1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 24532 24938 . - 0 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 24313 24428 . - . ID=g9426.t1.exon2;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 24313 24428 . - 1 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 23833 24020 . - . ID=g9426.t1.exon3;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 23833 24020 . - 2 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 23531 23622 . - . ID=g9426.t1.exon4;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 23531 23622 . - 0 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 23165 23278 . - . ID=g9426.t1.exon5;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 23165 23278 . - 1 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 22818 22935 . - . ID=g9426.t1.exon6;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 22818 22935 . - 1 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 22553 22663 . - . ID=g9426.t1.exon7;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 22553 22663 . - 0 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 22102 22320 . - . ID=g9426.t1.exon8;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 22102 22320 . - 0 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . exon 21461 21933 . - . ID=g9426.t1.exon9;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . CDS 21820 21933 . - 0 ID=cds.g9426.t1;Parent=g9426.t1 NODE_144_length_35134_cov_41.685 . three_prime_UTR 21461 21819 . - . ID=g9426.t1.utr3p1;Parent=g9426.t1 #PROT g9426.t1 g9426 MSSKFTRLPPDHLILERRRQEDLRGAMADQTRYFHKTLLQSQWERETDRKLAHNHVTAKLHRVKLGAEELLDRRRECLREMLDKERDDFIGELNSISAESDADKRDRMRKRAEELRQARERERQLLADEKQMLRFRNDCVELRAVHSKQLEEAVISERGAQLDDRQKQKEIERKEEAHFAQLWEEDRLKKVAREERDAAKRAQLNAETLQILRRQLADLKRRQELDDLLKAQQAELMKEQAELYMMEREREETEHRRRQQATREELAKYGRMHARRLQKQLQEEMALDLRILEEALAKNSDDTDAKRAEKRRLKEEALKYRQYIAEMRSMEQQREKERDALLEQESEREWERKLERIERERFAREKLMGEVLRTRREQIEYKLRENERLQHEGFVERQELLVQIDENRRIEETRREALQRTRDQYRSDLTHQIAYQQRTSDEERRLEQEELMLSEEAEREYNRMLQIEMTRRYDPKTFHQRKSSATIRGGRK* # PASA_UPDATE: g9427.t1, single gene model update, valid-1, status:[pasa:asmbl_1628,status:12], valid-1 # PASA_UPDATE: g9427.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1629,status:12], valid-1 NODE_144_length_35134_cov_41.685 . gene 25872 27400 . + . ID=g9427;Name=g9427.t1 NODE_144_length_35134_cov_41.685 . mRNA 25872 27400 . + . ID=g9427.t1;Parent=g9427;Name=g9427.t1 NODE_144_length_35134_cov_41.685 . five_prime_UTR 25872 25956 . + . ID=g9427.t1.utr5p1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . exon 25872 26166 . + . ID=g9427.t1.exon1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . CDS 25957 26166 . + 0 ID=cds.g9427.t1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . exon 26288 26313 . + . ID=g9427.t1.exon2;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . CDS 26288 26313 . + 0 ID=cds.g9427.t1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . exon 26467 26599 . + . ID=g9427.t1.exon3;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . CDS 26467 26599 . + 1 ID=cds.g9427.t1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . exon 26750 26886 . + . ID=g9427.t1.exon4;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . CDS 26750 26886 . + 0 ID=cds.g9427.t1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . exon 27018 27400 . + . ID=g9427.t1.exon5;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . CDS 27018 27060 . + 1 ID=cds.g9427.t1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . three_prime_UTR 27061 27400 . + . ID=g9427.t1.utr3p1;Parent=g9427.t1 NODE_144_length_35134_cov_41.685 . mRNA 25872 27400 . + . ID=g9427.t1.1.5b6be70a;Parent=g9427;Name=g9427.t1 NODE_144_length_35134_cov_41.685 . five_prime_UTR 25872 25956 . + . ID=g9427.t1.1.5b6be70a.utr5p1;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . exon 25872 26166 . + . ID=g9427.t1.1.5b6be70a.exon1;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . CDS 25957 26166 . + 0 ID=cds.g9427.t1.1.5b6be70a;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . exon 26288 26313 . + . ID=g9427.t1.1.5b6be70a.exon2;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . CDS 26288 26313 . + 0 ID=cds.g9427.t1.1.5b6be70a;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . exon 26467 26886 . + . ID=g9427.t1.1.5b6be70a.exon3;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . CDS 26467 26886 . + 1 ID=cds.g9427.t1.1.5b6be70a;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . exon 27018 27400 . + . ID=g9427.t1.1.5b6be70a.exon4;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . CDS 27018 27060 . + 1 ID=cds.g9427.t1.1.5b6be70a;Parent=g9427.t1.1.5b6be70a NODE_144_length_35134_cov_41.685 . three_prime_UTR 27061 27400 . + . ID=g9427.t1.1.5b6be70a.utr3p1;Parent=g9427.t1.1.5b6be70a #PROT g9427.t1 g9427 MEAKATDAVPEAAAATTTLAAPLVPAAAPAASTAGPAAGASDGQSFPTNTEQLFMVVSHALRAPADELKSAHSEENDNGNDKVRNRKTNHSAIERRRRDRINEKINSLRSLVPTCANQENLHKVSILEKVVEYIQGLVRDNEQLKRDVQTAKVESTRYREKLEAAQPAGDAAEKTTDVEMKQ* #PROT g9427.t1.1.5b6be70a g9427 MEAKATDAVPEAAAATTTLAAPLVPAAAPAASTAGPAAGASDGQSFPTNTEQLFMVVSHALRAPADELKSAHSEENDNGNDKVRNRKTNHSAIERRRRDRINEKINSLRSLVPTCANQENLHKARASIHLCVCELSIVLTSRQQPRSIDVLTHEYMNCWCFLAPILPTRLSLQVSILEKVVEYIQGLVRDNEQLKRDVQTAKVESTRYREKLEAAQPAGDAAEKTTDVEMKQ* # PASA_UPDATE: g9424.t1, single gene model update, valid-1, status:[pasa:asmbl_1625,status:3], valid-1 NODE_144_length_35134_cov_41.685 . gene 14093 18246 . + . ID=g9424;Name=g9424.t1 NODE_144_length_35134_cov_41.685 . mRNA 14093 18246 . + . ID=g9424.t1;Parent=g9424;Name=g9424.t1 NODE_144_length_35134_cov_41.685 . five_prime_UTR 14093 14496 . + . ID=g9424.t1.utr5p1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 14093 14786 . + . ID=g9424.t1.exon1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 14497 14786 . + 0 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 15065 15188 . + . ID=g9424.t1.exon2;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 15065 15188 . + 1 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 15532 15690 . + . ID=g9424.t1.exon3;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 15532 15690 . + 0 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 16125 16198 . + . ID=g9424.t1.exon4;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 16125 16198 . + 0 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 16650 16699 . + . ID=g9424.t1.exon5;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 16650 16699 . + 1 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . exon 16997 18246 . + . ID=g9424.t1.exon6;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . CDS 16997 17742 . + 2 ID=cds.g9424.t1;Parent=g9424.t1 NODE_144_length_35134_cov_41.685 . three_prime_UTR 17743 18246 . + . ID=g9424.t1.utr3p1;Parent=g9424.t1 #PROT g9424.t1 g9424 MELTDPDRSFNFKGMAVFAVFASTILFSFATVFFYFALRGTGFKQRRSLQNKRKAPEENMLSGMATCITGVVWFSRAVVFISLANKQEVSFNIENYKYFDYLISCPMLVLDICFVAEEPYKWTFTLLTALTLFIGALSVSSGGSDTRGESFAYFGLGSVFFTLLFYWLFRNLFRRLNQYPKDIRIYLRLAVYTFLVVWPFFPILYLIGPLVWGFMSVETDTYLHGLLDICAKGLYGAFLLRFRLCLEDIENNALAASELMPVTGVGIVGDGEGGMMRMTAPLARSGSNFDATNSNNKRNSSKSVHAVDSFLQVPQLQELTGVVPVTIENDDTITIPTVRSHCLDGAGRSDTGAFLDEAQLQQLHRSRLAVASGVSFASTFVPSHRAESTTQQQQQQRRYIYQQQQQGGAYAPHRQRAPLPMTTSPEDVRLMLRNFSSLINGMLEGFDNSQQYISGEAEPQIRSDCASEDAVDSMWNTGGN* # PASA_UPDATE: g9422.t1, single gene model update, valid-1, status:[pasa:asmbl_1624,status:12], valid-1 NODE_144_length_35134_cov_41.685 . gene 247 5956 . + . ID=g9422;Name=g9422.t1 NODE_144_length_35134_cov_41.685 . mRNA 247 5956 . + . ID=g9422.t1;Parent=g9422;Name=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 247 357 . + . ID=g9422.t1.exon1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 247 357 . + 0 ID=cds.g9422.t1;Parent=g9422.t1;5_prime_partial=true NODE_144_length_35134_cov_41.685 . exon 594 881 . + . ID=g9422.t1.exon2;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 594 881 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 1129 1251 . + . ID=g9422.t1.exon3;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 1129 1251 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 1438 1537 . + . ID=g9422.t1.exon4;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 1438 1537 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 1709 1797 . + . ID=g9422.t1.exon5;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 1709 1797 . + 2 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 1889 1957 . + . ID=g9422.t1.exon6;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 1889 1957 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 2456 2572 . + . ID=g9422.t1.exon7;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 2456 2572 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 2840 3502 . + . ID=g9422.t1.exon8;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 2840 3502 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 3663 3927 . + . ID=g9422.t1.exon9;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 3663 3927 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 4146 4639 . + . ID=g9422.t1.exon10;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 4146 4639 . + 2 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 4949 5465 . + . ID=g9422.t1.exon11;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 4949 5465 . + 0 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . exon 5746 5956 . + . ID=g9422.t1.exon12;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . CDS 5746 5807 . + 2 ID=cds.g9422.t1;Parent=g9422.t1 NODE_144_length_35134_cov_41.685 . three_prime_UTR 5808 5956 . + . ID=g9422.t1.utr3p1;Parent=g9422.t1 #PROT g9422.t1 g9422 FVKRAFANRSVAVTGINRESSRSHVVLTITVDTHKENMTKRSRLNFVDLAGSERQRDVQTPPLQSSSSARDLSSGLSSSSGGVKDRRSSLMRESENINKSLSALTGVITALSESESGRQHVPYRDSKLTFLLKDSLGGNSRTRIIATVSPLYCYRGDTMATLGFAARAKSIKCSVHVNEAVASNQFAHVTALENEIATLKAALARARGDLVRECNEVSIPSAVPFFVECGVQTDPEEGTPPDMSVGLAMEELREANAALQSELNAVRVSFDEKGAALQAALTSAENECRRLRSNESDCTAQWNADRNAMMEAVAALHTSQSRNATLEAQMSSLEGQCAQLRAQWQAEKDSGEQLTLLQASLHRAEEARREKAGQFAEVEVAFERAECARREAVASADVLRRDQDVLRAELTRMQSEKASLLETVNNLQQEIDTHGCELRENALDLSCALDGMRDERDQKSKEVERLLEDVEDGQRELRALKDSVRHLETDVADARESNADLHSQLDNARRSNELLKSQLVLLIDAIDKTRAADASIADENSNAPNVQTGTVIHHTGLKHTTAPMDTQVEDAEEAQGNFGQDNAIGSTVSSHEPLESTFQISSATNTQIDEDGARKEDVCVETTHDTDAQLVQQHGTSAVPVTASPQLESAHRFAEECARGETVGENSDVCLSAHEDGNGDRDCEEDEKLSNSDEESECEEMERGVDGRTQSLSTPVGARPDSRRRTVSFSNEVCAIERTDAAANSTKKRRRRRLSDQLLAFKRRIRNFLRPRTRDDASVTSEKVGVASDVAASHLTQQQPTLQSSTVGDVSKSVAPTDTSRVVPADGRPVDGALSHECDASAGGAGVGGGVGGSATQSPPDVCVSDGHDAHTSSQKAMSAELDASPALSKPSRVESESVRATSATISGGTSIDGDGRSRAVGCDKRNSSAGAPVSTEFVGIMARTGSMELRSFGTPLGRSLQAAY* # ORIGINAL: g9428.t1 original gene structure, not modified by PASA NODE_144_length_35134_cov_41.685 AUGUSTUS gene 27444 31938 . - . ID=g9428;Name=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS mRNA 27444 31938 . - . ID=g9428.t1;Parent=g9428;Name=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 31846 31938 . - . ID=g9428.t1.exon1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 31846 31938 . - 0 ID=cds.g9428.t1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 31521 31632 . - . ID=g9428.t1.exon2;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 31521 31632 . - 0 ID=cds.g9428.t1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 29143 31270 . - . ID=g9428.t1.exon3;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 29143 31270 . - 2 ID=cds.g9428.t1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 28030 28762 . - . ID=g9428.t1.exon4;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 28030 28762 . - 1 ID=cds.g9428.t1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 27742 27914 . - . ID=g9428.t1.exon5;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 27742 27914 . - 0 ID=cds.g9428.t1;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 27444 27531 . - . ID=g9428.t1.exon6;Parent=g9428.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 27444 27531 . - 1 ID=cds.g9428.t1;Parent=g9428.t1 #PROT g9428.t1 g9428 MQQVQVIPEDVRLHPTAVTVEPSTEDDWEIIETNAGHVEASLLAQIRVFTVGMTIPIWIRTQHVRVHVVSVEGVDGLSNNNALRFDEGCEVRVAPKVRRRPTDDSAARATPHDLQQAAAAAAQLTAGDCIRRVIPAERLMHLPYACIPESCNGGVQSATATSERESAGGDRVTKAQIDAHVPLLWPAGLCALLSPRDILLASATPDSVAFVEVLSPATHANGPLKAIFACQSRDDVPEGHIALPDAARLHLGHVRLSCCSVREVPLASDVCIGGKVTKLRATVIRFKERGPVNAAEWNERVADAVLRTLVDVHASVGVFPMRDGVLLRVAVGSNRADHVTVALHRAVEGPQQLPKVANDVAALGGGSIWCIDAANPSLLSVDVMMTDGADSVRLVELSIDPHIAPPMNDVSDGGALHEFHLPGMSRAVSMCTDILSAAFTPTVRRALRCPHPSGLLVHGSSGSGRSRLLATLSHMAEAGALTWGGRGGAPVRAVHVACGALSGDLRKAPVAALASALSMAYSCRPSVLVLDDFDALLQNSMDGELDSSSLSVLRALADWMDSACEGVDASGSCIVGACLDGSPCAVVASCRDGGAVLGMTNSFGLFDNAVELRNPGVQERRDIVSHLLSCNGLIDNKDPGSNAESAPVVSEDSDITLLDEIASTTDGYTVADLSNLCERVSHAVAVRAAMSGASPLVGDVHATRDDLARARKGFMPSSLRGLRGSKKGDGGGEKSVTWADVGGLAGAKSLLRETIEWPAKYARLFSQCPLRHRSGVLLYGPPGCGKTLIASAVAAECGLGYVAVNGPELLGKYIGSSEAAVRDLFSRARAAKPCVLFFDEFDAIAPVRGSDTAGVADRVVNQLLTELDGVESSGGVYVLAASSRPDMIDPALLRPGRMDRCVLIGRPTFSERVDILRSVSRHMDVDSEIDFESIAENCEWFTGADLQGLVSTAHVAAVRQTLLGESSGGDWSAVLAGSGSDGVGQAVTGAGGHVGSLAAATDGHIVGDGDMTASERAAMNERVGRVVEGASAAARNRNGASGSGLGVRQRIVLTQRHFVDALGDTRPSTSLAEWRRLDALYNEFANARSGGGSANATPPQHPKRVTLA* # ORIGINAL: g9423.t1 original gene structure, not modified by PASA NODE_144_length_35134_cov_41.685 AUGUSTUS gene 6365 13283 . - . ID=g9423;Name=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS mRNA 6365 13283 . - . ID=g9423.t1;Parent=g9423;Name=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 13186 13283 . - . ID=g9423.t1.exon1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 13186 13283 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 12321 13053 . - . ID=g9423.t1.exon2;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 12321 13053 . - 1 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 12074 12150 . - . ID=g9423.t1.exon3;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 12074 12150 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 11898 11935 . - . ID=g9423.t1.exon4;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 11898 11935 . - 1 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 11650 11726 . - . ID=g9423.t1.exon5;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 11650 11726 . - 2 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 11413 11433 . - . ID=g9423.t1.exon6;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 11413 11433 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 11070 11198 . - . ID=g9423.t1.exon7;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 11070 11198 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 10794 10907 . - . ID=g9423.t1.exon8;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 10794 10907 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 10321 10605 . - . ID=g9423.t1.exon9;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 10321 10605 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 10075 10197 . - . ID=g9423.t1.exon10;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 10075 10197 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 9801 9894 . - . ID=g9423.t1.exon11;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 9801 9894 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 9517 9605 . - . ID=g9423.t1.exon12;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 9517 9605 . - 2 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 9159 9317 . - . ID=g9423.t1.exon13;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 9159 9317 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 8558 8674 . - . ID=g9423.t1.exon14;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 8558 8674 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 6998 8242 . - . ID=g9423.t1.exon15;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 6998 8242 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS exon 6365 6835 . - . ID=g9423.t1.exon16;Parent=g9423.t1 NODE_144_length_35134_cov_41.685 AUGUSTUS CDS 6365 6835 . - 0 ID=cds.g9423.t1;Parent=g9423.t1 #PROT g9423.t1 g9423 MMRPPSSVGKTAGSAAKLNTPATSSVSKSPVRSRSGSTGSITQSPQSARPRLVTPSTRTPSTVHGTPSTAHATPLTAHASASTHHTAAQGGTHSSLSGRPPAPVKSPTSSTAGSTSARSSGYGQSTSAPSTPGILRRTQSQSAPTSSPHGLVNSRTASSTSHATGTTCVQREPIFVAVRIRPPSTTASANSKAIASTAAAASTYTGIAGNLWPTAFTAAASLIGRGKSNKGDAEDDGKDADRFLCVKEGGLVVVEGPSHKAEKSFVFDYVADEHVTQGDVFQNVASHVISGCLDGYNGAILTYGPTQSGKSYTLFGSPEAEGIVPRAIDRIFEQIGMAQLSEDRSDLQWDALTRLCPVRSPLSRLLYGDGGCAVVDGLSEHDFVRAFDALELVRQGLSNRALAGRELKRKSYRSFVILNIAIHAKSQSAGSKRSLLTFADLGSDSPVSDGSHAVHSASSSLSGAATVDMPVTRRQSTASATVPKAAESGDFSLSTLRAVVQSLSSDAGTQLPPFGDSKLTLLLKDCFGGNTRTRIIATVDPAEGHRTASLATLNFATRCKLVRCFIRPNETARRGSITASLEDQVANLQMALARSKGRVRSMSLSSFPSMSDCAVQTDSVDSGLGGAAHFAGDMLGKMVTRFRTSVSAGSSTSTGPHPEGSQEALVETAELRVENAALKTELATAQRLLEEKTKQADSAMQSRNEMGLLTSAKETDFMTKISNMEAQREFDHQLIAELTGARNTARAKVESLEADVEQLRTHQGYNRESSIQLATVQTALERATSERDALATSMLSLEKKMKDSAAENAALRSSVVEKEEAMSSMRRQVEAQGVALLREAEELGRVVRDLRQELNARNTEVATLSAQLEGKDRHIRELVETTQSLDGAAVVAAERRAGETAEQLAIARRENETLTSRLMELSDALDSERHARLKHEQDARKPPFAATATMHAETHALPPGIPYDTDNKGHVSNQITDTPFDYDDDGTLSMTYSEGMWTREASREVFPPASVRGAVSVPAKVVFASPLPRTPSPTHSTSSTSRPSHPRMGGAASESDLYMSGKRLMEQLARASPSHAPAAHMAPASPRGAQSSAPVSRTNSGASLPPFVPSPTAATAAARSAQNDAHSMSVSSRKGIPPHSGHVISAVGPTSSSTHGRAPHRHGESLNHPNAVSTSPVPTASPAGRHQPSPQQSLTGRRSTESIASLHLGSMERIVEGAGVGQYVEVAPGFAVPVQRATKSPMSKAAPGGLSDSANLAALLSSADSSQLHLLGLSLGRSMSSRPRTTAGH* # PASA_UPDATE: g9425.t1, single gene model update, valid-1, status:[pasa:asmbl_1627,status:3], valid-1 NODE_144_length_35134_cov_41.685 . gene 18807 21313 . + . ID=g9425;Name=g9425.t1 NODE_144_length_35134_cov_41.685 . mRNA 18807 21313 . + . ID=g9425.t1;Parent=g9425;Name=g9425.t1 NODE_144_length_35134_cov_41.685 . five_prime_UTR 18807 19157 . + . ID=g9425.t1.utr5p1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . exon 18807 19459 . + . ID=g9425.t1.exon1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . CDS 19158 19459 . + 0 ID=cds.g9425.t1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . exon 19666 19788 . + . ID=g9425.t1.exon2;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . CDS 19666 19788 . + 1 ID=cds.g9425.t1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . exon 19970 20117 . + . ID=g9425.t1.exon3;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . CDS 19970 20117 . + 1 ID=cds.g9425.t1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . exon 20271 20344 . + . ID=g9425.t1.exon4;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . CDS 20271 20344 . + 0 ID=cds.g9425.t1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . exon 20497 21313 . + . ID=g9425.t1.exon5;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . CDS 20497 21169 . + 1 ID=cds.g9425.t1;Parent=g9425.t1 NODE_144_length_35134_cov_41.685 . three_prime_UTR 21170 21313 . + . ID=g9425.t1.utr3p1;Parent=g9425.t1 #PROT g9425.t1 g9425 MSESTSASHSVVDNVNHKGMAVFAIFASVILFVCSAIFFYFAVRGTGFKYRRPHSKTKAPEENMLSGMATCITGVVWFSRAVLFIMLSGGHDVAFNIENFRYYDYLLSCPMLVLDVCFITEQPFKWTITLLTALTLFVGAISVNSNKPETFAYFALGCVFFAFLFYWLFRNLYRRLGDYPKNIRIYLKLAMYTFIIVWPMFPILYVIGPQIAGFISIEADAYVHGFLDICAKGLYGAFLTRFRLCLEDIHNQQYYINGGAQCTELDTNCHHGAGGSGHKDNNGMSSASSQAGGKREAFAQRLEDVRVNMGSDIQPIQTRNFFVPVFGGGHGNMDGDGPYQPSQADPGEAFDMRTLPHSQCVSMPHLGQDGGYVPSRPAPSVSGRQSVAAQSMRGGEQRRPPPSGDEVYMMLRNFNALVNGMLNGYEDPSSSETHDSLHQ* # PASA_UPDATE: g9318.t1, single gene model update, valid-1, status:[pasa:asmbl_5590,status:12], valid-1 NODE_3115_length_4268_cov_37.8872 . gene 252 4108 . - . ID=g9318;Name=g9318.t1 NODE_3115_length_4268_cov_37.8872 . mRNA 252 4108 . - . ID=g9318.t1;Parent=g9318;Name=g9318.t1 NODE_3115_length_4268_cov_37.8872 . five_prime_UTR 4047 4108 . - . ID=g9318.t1.utr5p1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . exon 3410 4108 . - . ID=g9318.t1.exon1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . CDS 3410 4046 . - 0 ID=cds.g9318.t1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . exon 2760 3113 . - . ID=g9318.t1.exon2;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . CDS 2760 3113 . - 2 ID=cds.g9318.t1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . exon 1779 2171 . - . ID=g9318.t1.exon3;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . CDS 1779 2171 . - 2 ID=cds.g9318.t1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . exon 882 1265 . - . ID=g9318.t1.exon4;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . CDS 882 1265 . - 2 ID=cds.g9318.t1;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . exon 252 391 . - . ID=g9318.t1.exon5;Parent=g9318.t1 NODE_3115_length_4268_cov_37.8872 . CDS 252 391 . - 2 ID=cds.g9318.t1;Parent=g9318.t1;3_prime_partial=true #PROT g9318.t1 g9318 MAGIRPFNLYAFAAVLTCVLFGLESDALTWKPYDIKYTPSGGCMTTGVEPPVSWLNITLYMRGYSTARRDVRSGDETDVDVDNEGNAHVERRFSPVIISTIPIVLLLSDDPGQNTVAMTMSIAGKFSYTLYSNGWAAVATTDGTTRKSLSFAVACTSIFSAGVFYGYRSSSYSITTTGMTWTGINTNTKYAVTSSDIATYMGNQPTAYALNFVPPAPQLTSLTFPATTTDTVITATLSQTSSVSPGIGMNDVIVCFSNFNSAYCMAMTPTTTDERLMVRTFTLTLNVKSYPGWWYVTYIRTKDFQGTQAGEMNWSWLDANRFYPRFFVGADTTPPVIQSVYLTPPSMLGNMVINALLSKLTVVARDDGWSICRAASIPGCNHQAIISSDAQPGVNITLLAAVTTALPTSNDATLLFGVSQALSVGGYTVKWLRVSDRINAVTMTTDDLIKRGFPVRFYVGADVTAPKLSGPLVVSPASSVNVASGAAASMSFTIPVLDAESQVNSWGSAIPAMQITNDSTSSAAFVTLSPSQYVFSATANQPVKLTFNLTAPPYPSRFRISSLLIFNWDNVLLNMTSSYFSSCEYFLGVDATPPTYVSLNGVTRPMSAASPHELRITLSDLGVGLDDYTDGLVTAV # ORIGINAL: g8797.t1 original gene structure, not modified by PASA NODE_1348_length_11865_cov_47.4179 AUGUSTUS gene 204 1022 . + . ID=g8797;Name=g8797.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS mRNA 204 1022 . + . ID=g8797.t1;Parent=g8797;Name=g8797.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 204 317 . + . ID=g8797.t1.exon1;Parent=g8797.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 204 317 . + 0 ID=cds.g8797.t1;Parent=g8797.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 540 1022 . + . ID=g8797.t1.exon2;Parent=g8797.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 540 1022 . + 0 ID=cds.g8797.t1;Parent=g8797.t1 #PROT g8797.t1 g8797 RVLSQFSAESHVADVRVAKAHKRKKSRLSKKNSLKSQQGSGRSARDNDTGKQIHHRPPLDDSASDSEDDGHVPHHVPAQALHALPHHPADQTHHMSMSNSQSSSMSTSASASTKGNDKDKVGVGLPPQRRQGADAVAATALAALSMSHATARKALTQELGSSMGRMSPVGSRHGSGQLRHSANSNSRKLRFSDSPDKW* # ORIGINAL: g8799.t1 original gene structure, not modified by PASA NODE_1348_length_11865_cov_47.4179 AUGUSTUS gene 6265 10118 . + . ID=g8799;Name=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS mRNA 6265 10118 . + . ID=g8799.t1;Parent=g8799;Name=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 6265 7717 . + . ID=g8799.t1.exon1;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 6265 7717 . + 0 ID=cds.g8799.t1;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 8000 8219 . + . ID=g8799.t1.exon2;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 8000 8219 . + 2 ID=cds.g8799.t1;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 8380 8818 . + . ID=g8799.t1.exon3;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 8380 8818 . + 1 ID=cds.g8799.t1;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 9013 9177 . + . ID=g8799.t1.exon4;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 9013 9177 . + 0 ID=cds.g8799.t1;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 9420 10118 . + . ID=g8799.t1.exon5;Parent=g8799.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 9420 10118 . + 0 ID=cds.g8799.t1;Parent=g8799.t1 #PROT g8799.t1 g8799 MVKKDRLDDAPSKGKKGVAEEAQVAKGKKVEDVPKNAKKDKDDSQKGKAKEDALPKGKKKGKAGSDDDDDAEEDERVAKGKSNAPTKGKKKGKAGSDDDEPAVSKKSKKARGGDSDNDDDAEEDERVAKGKSNAPAKGKKKGKAGSDDDEPAVSKKSKKARGGDSDNDDDAEEDERVAKGKSNAPAKGKKKGKAGSDDDDAADVEDEGKKVSATPAPEEGAAKGKKGKKGGNATDSAKGAAPKGKGKKQRFDWGDVEDELEQEEEEERQRLEKEKLEKERLEKEALEKERLEQEALEKERLETERLEMARVEKERAEKAENEKEALAKAEQARDGDKAGEGASVVDSAAGKDTKNDDEDDDDEEEEGGDGKDKDKEKGTKDGKRAGGSGVLGGKRELTRKARKALQKLEEAERRDADLKRLDESGAQFAVSQAGAANAKEQANFQNATDIKVDKFSISAGGKDLFVNASLTIAQGRRYGLVGPNGMGKTTLLTQIASRALQIPSNIDILYVEQEIEANDIPVVDVVLAADQHRLKLLEEEKKLLEDAEKSEGFAATDRLKEVYDELNNTGAASAESRARKILYGLGFEPDMQKRPTKSFSGGWRMRVSLARALFIQPTLLLLDEPTNHLDLNAVIWLDSYLQKWKKMLLVVSHDQDFLNNVCTDVIHLDQQQLFYYKGNYYDFKKMHGQKMKEVAKQYEKQERKLRELKKSGHSSKQAEEKATRVQDQKLRHGQRNKGMVDEANEPAKAELIKRPKEYVVHFEFPDPSELAPPILEIIDAGFRYGEGPILFEDLHFGITMESRVTIVGPNGVGKSTLLNIMTGVLVPTTGEVRRNRKLRIGRFNQHFVDQLPMAKTPVEYLVDKYNEKLNYQEARGLLGKYGLGGHAHTIKIKELSGGQKARVAFVDVALYEPHILFFDEPTNHLDLESIDALIDAINDFKGGVVVVSHDARLIKSTNCELWVCANKTCEAFEGVFDDYRDMIIKDVESSV* # PASA_UPDATE: g8798.t1, single gene model update, valid-1, status:[pasa:asmbl_1277,status:12],[pasa:asmbl_1278,status:12],[pasa:asmbl_1279,status:13], valid-1 NODE_1348_length_11865_cov_47.4179 . gene 1262 5627 . - . ID=g8798;Name=g8798.t1 NODE_1348_length_11865_cov_47.4179 . mRNA 1262 5627 . - . ID=g8798.t1;Parent=g8798;Name=g8798.t1 NODE_1348_length_11865_cov_47.4179 . five_prime_UTR 5366 5627 . - . ID=g8798.t1.utr5p1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 5277 5627 . - . ID=g8798.t1.exon1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 5277 5365 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 4798 4978 . - . ID=g8798.t1.exon2;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 4798 4978 . - 1 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 4246 4444 . - . ID=g8798.t1.exon3;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 4246 4444 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 3876 4072 . - . ID=g8798.t1.exon4;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 3876 4072 . - 2 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 3385 3522 . - . ID=g8798.t1.exon5;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 3385 3522 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 3147 3251 . - . ID=g8798.t1.exon6;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 3147 3251 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 2755 2962 . - . ID=g8798.t1.exon7;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 2755 2962 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 2273 2388 . - . ID=g8798.t1.exon8;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 2273 2388 . - 2 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . exon 1262 2002 . - . ID=g8798.t1.exon9;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . CDS 1841 2002 . - 0 ID=cds.g8798.t1;Parent=g8798.t1 NODE_1348_length_11865_cov_47.4179 . three_prime_UTR 1262 1840 . - . ID=g8798.t1.utr3p1;Parent=g8798.t1 #PROT g8798.t1 g8798 MAKKLFKLDEEDLKRAPEEVFDMQEKLGEGSYGSVFKAIHKASGEIIAIKQVPVENDLQDIIKEISMMQQCDSPFVVKYYGSYFKDTDLLIVMEYCGTGSVADIMRLRKKPLGEEQIAVVLENTLRGLDYLHGKRKIHRDIKAGNILLNTKGQAKLADFGVAGQLSDNMAKRNTVIGTPFWMAPEVIQEIGYDVKADIWSLGITAIELAEMKPPYADIHPMRAIFMIPTKPPPSFTHPEKWSKAFVDFIAKCLVKNPEERASAKQLLEHPFIKGAKGVSVLSDVVEETLEIIALKGMNPSDSEDDEEEEDNGTMVSGTIVRGSSSSSASTGTMVSSGTMVSTGTMVSSGTMVSSGTMVARDGTMVYSDSTVKSAPSSSDNYRPAFMDHIQKQSQRKEIAAPADLPQDLINQLKAMGLDELKRKLASLDPEMEREIDELRRRYDAKRTPILVAMETKKAKEKASA* # ORIGINAL: g8800.t1 original gene structure, not modified by PASA NODE_1348_length_11865_cov_47.4179 AUGUSTUS gene 11089 11768 . - . ID=g8800;Name=g8800.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS mRNA 11089 11768 . - . ID=g8800.t1;Parent=g8800;Name=g8800.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 11587 11768 . - . ID=g8800.t1.exon1;Parent=g8800.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 11587 11768 . - 2 ID=cds.g8800.t1;Parent=g8800.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS exon 11089 11313 . - . ID=g8800.t1.exon2;Parent=g8800.t1 NODE_1348_length_11865_cov_47.4179 AUGUSTUS CDS 11089 11313 . - 0 ID=cds.g8800.t1;Parent=g8800.t1 #PROT g8800.t1 g8800 LVRAEVDDVRDVLKFYEGKDLIETFKENQRRVAMQQQQQLIAQQQQQRGPSLGSLFRSSSPAPAPQGQLALPPAETLTQSSTPTSQAAQSTAAHDAVESAQQSLQKPTLWERVFGSSAPPASPQTVPAVEQTRQ* # PASA_UPDATE: g3008.t1, single gene model update, valid-1, status:[pasa:asmbl_8959,status:12], valid-1 NODE_7005_length_481_cov_97.3399_potentialcontaminant . gene 1 481 . - . ID=g3008;Name=g3008.t1 NODE_7005_length_481_cov_97.3399_potentialcontaminant . mRNA 1 481 . - . ID=g3008.t1;Parent=g3008;Name=g3008.t1 NODE_7005_length_481_cov_97.3399_potentialcontaminant . five_prime_UTR 481 481 . - . ID=g3008.t1.utr5p1;Parent=g3008.t1 NODE_7005_length_481_cov_97.3399_potentialcontaminant . exon 1 481 . - . ID=g3008.t1.exon1;Parent=g3008.t1 NODE_7005_length_481_cov_97.3399_potentialcontaminant . CDS 1 480 . - 0 ID=cds.g3008.t1;Parent=g3008.t1;5_prime_partial=true;3_prime_partial=true #PROT g3008.t1 g3008 GSWSDDERRRLLEGIVKHGRDWTAVAGHVGTGRTPNDFQYTARKAFGGFDYANGVQGKRFTADEDARLRIAVERHGRDWVKVAKDVPGRGRQSLFVKYNRFIPQWMRVSYSPAARASVRALLRGDGDVESKLAAQFKDLDAAKGWVALELGMDDVSQVDW # PASA_UPDATE: g4794.t1, single gene model update, valid-1, status:[pasa:asmbl_5682,status:12], valid-1 NODE_3182_length_4083_cov_42.9885 . gene 2846 4034 . + . ID=g4794;Name=g4794.t1 NODE_3182_length_4083_cov_42.9885 . mRNA 2846 4034 . + . ID=g4794.t1;Parent=g4794;Name=g4794.t1 NODE_3182_length_4083_cov_42.9885 . five_prime_UTR 2846 2948 . + . ID=g4794.t1.utr5p1;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . exon 2846 2957 . + . ID=g4794.t1.exon1;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . CDS 2949 2957 . + 0 ID=cds.g4794.t1;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . exon 3110 3305 . + . ID=g4794.t1.exon2;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . CDS 3110 3305 . + 0 ID=cds.g4794.t1;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . exon 3514 3662 . + . ID=g4794.t1.exon3;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . CDS 3514 3662 . + 2 ID=cds.g4794.t1;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . exon 3795 4034 . + . ID=g4794.t1.exon4;Parent=g4794.t1 NODE_3182_length_4083_cov_42.9885 . CDS 3795 4034 . + 0 ID=cds.g4794.t1;Parent=g4794.t1 #PROT g4794.t1 g4794 MFKATAQLARSAGRASLRRCTASPAVAAVRRPATVSRVPIGNPSGSVQSAAARAVMSHAPYSTQATTAVPTTDKNAAMFCFQCEQTRNGTGCTTIEGGVCGKTPEVAALQDLLMHLLKGTAMYASKTRALRTDALPIDKDIDVFIMKSTFATLTNVNFDGDRFKRQVKWNWIFVFDSHRLKQSARNGGNTTTHAWEN* # ORIGINAL: g4793.t1 original gene structure, not modified by PASA NODE_3182_length_4083_cov_42.9885 AUGUSTUS gene 502 2663 . - . ID=g4793;Name=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS mRNA 502 2663 . - . ID=g4793.t1;Parent=g4793;Name=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS exon 2630 2663 . - . ID=g4793.t1.exon1;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS CDS 2630 2663 . - 0 ID=cds.g4793.t1;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS exon 1810 1994 . - . ID=g4793.t1.exon2;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS CDS 1810 1994 . - 2 ID=cds.g4793.t1;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS exon 1140 1268 . - . ID=g4793.t1.exon3;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS CDS 1140 1268 . - 0 ID=cds.g4793.t1;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS exon 502 756 . - . ID=g4793.t1.exon4;Parent=g4793.t1 NODE_3182_length_4083_cov_42.9885 AUGUSTUS CDS 502 756 . - 0 ID=cds.g4793.t1;Parent=g4793.t1 #PROT g4793.t1 g4793 MPQSLSFGVQLLPHLGISIEIHTVDCSNSDVDARVTDQTRQSPSPAVSDSARPGDSNSRTYVATQAVPREYGTATPLKILYGSQTGTAQGFAEALGDEARRRSVPCEVTDLAEYNPSDIAQERTVVLVAACYGEGEPTDSAKSFVNWLSSTSEKVAPDLRYAASIAVTLLTVCIHAEHAVIPTDLRMHAWSVPRDPAVWR* # ORIGINAL: g2995.t1 original gene structure, not modified by PASA NODE_24061_length_78_cov_38.3333_potentialcontaminant AUGUSTUS gene 2 78 . + . ID=g2995;Name=g2995.t1 NODE_24061_length_78_cov_38.3333_potentialcontaminant AUGUSTUS mRNA 2 78 . + . ID=g2995.t1;Parent=g2995;Name=g2995.t1 NODE_24061_length_78_cov_38.3333_potentialcontaminant AUGUSTUS exon 2 78 . + . ID=g2995.t1.exon1;Parent=g2995.t1 NODE_24061_length_78_cov_38.3333_potentialcontaminant AUGUSTUS CDS 2 78 . + 1 ID=cds.g2995.t1;Parent=g2995.t1 #PROT g2995.t1 g2995 EEEEEEEEEEEEEEEEEEEEEEEEE # PASA_UPDATE: g1546.t1, single gene model update, valid-1, status:[pasa:asmbl_5141,status:12], valid-1 NODE_2865_length_4898_cov_38.0728 . gene 154 4898 . + . ID=g1546;Name=g1546.t1 NODE_2865_length_4898_cov_38.0728 . mRNA 154 4898 . + . ID=g1546.t1;Parent=g1546;Name=g1546.t1 NODE_2865_length_4898_cov_38.0728 . five_prime_UTR 154 281 . + . ID=g1546.t1.utr5p1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 154 347 . + . ID=g1546.t1.exon1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 282 347 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 619 706 . + . ID=g1546.t1.exon2;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 619 706 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 897 952 . + . ID=g1546.t1.exon3;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 897 952 . + 2 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 1164 1241 . + . ID=g1546.t1.exon4;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 1164 1241 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 1549 1615 . + . ID=g1546.t1.exon5;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 1549 1615 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 1870 1973 . + . ID=g1546.t1.exon6;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 1870 1973 . + 2 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 2304 2384 . + . ID=g1546.t1.exon7;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 2304 2384 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 2705 2836 . + . ID=g1546.t1.exon8;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 2705 2836 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 3132 3287 . + . ID=g1546.t1.exon9;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 3132 3287 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 3560 3592 . + . ID=g1546.t1.exon10;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 3560 3592 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 3891 3953 . + . ID=g1546.t1.exon11;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 3891 3953 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 4209 4314 . + . ID=g1546.t1.exon12;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 4209 4314 . + 0 ID=cds.g1546.t1;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . exon 4588 4898 . + . ID=g1546.t1.exon13;Parent=g1546.t1 NODE_2865_length_4898_cov_38.0728 . CDS 4588 4898 . + 2 ID=cds.g1546.t1;Parent=g1546.t1;3_prime_partial=true #PROT g1546.t1 g1546 MVFIKPFSPNEFKSSMHSVLRQIVKKDDVVFENAYFKMTCPESWNVVYRLKGKLAKDNYRIQYMDFLDGKEKVIAQSESFDEIFQDWETLNTRVIPQLKKNPEKEKQIVEIIESLRSTVVGSRGSFRKASATNRLQEARNRFEEKLRNMVESRAASKHIQDYDIVRTLGTGSFGRVFLAKDHADQKFYAIKMIKKAIVIKLKQVEHTTNEKNILSCIDCPFVISLQTYFQDKMNLFFVIEYINGGEMFTHIHRQRHFSSEVTRFFAAEVVLAFEYLHNLDIVYRDLKPENLLIDCHGHVRVTDFGFAKRVSDRTWTLCGTPEYLAPEIILSKGYAHAVDWWAMGILIYEMRAGHAPFTDPNQMEMYRKIVEGHVQYPMHFKEDEKDIIGCFLKGDLTRRLGNMKGGVEDIKAHVFFKSINWEAMYNLQVKSPYIPKVRACVWTLYMG # ORIGINAL: g10841.t1 original gene structure, not modified by PASA NODE_1924_length_8516_cov_41.8514 AUGUSTUS gene 3796 6814 . + . ID=g10841;Name=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS mRNA 3796 6814 . + . ID=g10841.t1;Parent=g10841;Name=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 3796 5348 . + . ID=g10841.t1.exon1;Parent=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 3796 5348 . + 0 ID=cds.g10841.t1;Parent=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 5638 6022 . + . ID=g10841.t1.exon2;Parent=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 5638 6022 . + 1 ID=cds.g10841.t1;Parent=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 6224 6814 . + . ID=g10841.t1.exon3;Parent=g10841.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 6224 6814 . + 0 ID=cds.g10841.t1;Parent=g10841.t1 #PROT g10841.t1 g10841 MADEDGSDGWRPPPHYLRRQGDNSCSDEDEPIVPARNSTRVTSTAVAPTARGTVPVHGKAPMAASSHPKPIVVARVGDSRLRQQQQQQQQQQSQGADAEGSDGSRPSSGTLNSPRVIRSAQSGAPPRPRSGKLVAGAPSRVAISASAPKSSPTSRPARVGSGKRERSAHTVQSATPSQAGSGGSATSQLLQQQTQQQQQQLQQQQQQQQQQQQQPQQQQQLQQQPMGVFSVEANAAAISHRRPSYSSYAAFDEDNRDIPRDRLVQEALFELSDHVPQKGHTVLASFCLQTAREIAQQQSQELAFNQQVAQMQQLALQQSMNPSVQQQQQQSSTASTTGSAGASTAPPPSNSVPPQQGPTSSAVSYSQSTAYNSNAPMTTTPTLVTLPIQTHYAQTLYVPGFSCPPNQRDLEDLFSELKDARDMDVAMSWVPLGGTGTDAVANTAVKPVYAGGSGVPDARKAAGAKQKAAAAEALSGKCFVFRHLAHSHGHIEQYRATHTCVSRVLSARRVNAGGRLARERERETAEFAQAVRAALRENQMQQLHEQQAAHQAAIMESAYTSPYSSHAQTQRRATVAESSYQQYYYATSPRPHAIGAYGGVPPSNNGSAGVSVGQGQSSSPSRALNRPLGRGGAGDTAAEERVNSGSHAMSVLRLLESTAAFAPPDEAGAASGHHGQSSPMLNRGRSFSDVDRTPPRVRGIIHDTNSPGGMYGSSSQIASPDAARRCGGSESSPSRYMSQPQLQREGVSVRERKSSAILSAVNSQSSHGLYAGSIGNLQTNAGAVGSSLSGNGNGLSGRNASATNVAGDGSSEYVVQFRNKLWDIQQRRSKKFESLKDVLRLE* # ORIGINAL: g10840.t1 original gene structure, not modified by PASA NODE_1924_length_8516_cov_41.8514 AUGUSTUS gene 329 2733 . + . ID=g10840;Name=g10840.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS mRNA 329 2733 . + . ID=g10840.t1;Parent=g10840;Name=g10840.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 329 1198 . + . ID=g10840.t1.exon1;Parent=g10840.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 329 1198 . + 0 ID=cds.g10840.t1;Parent=g10840.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 1552 2733 . + . ID=g10840.t1.exon2;Parent=g10840.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 1552 2733 . + 0 ID=cds.g10840.t1;Parent=g10840.t1 #PROT g10840.t1 g10840 ESLSSLKYANRARNIRNRPIVNTSPEEALLAEMRQEIDVLRTQLKEQQQQHQTLQSEHESRQRELMERQDKLVQDEVARKLSTAGLSTSIVFDGVGPKTIDGVVGELKARTIRGANVARDLAQANDKIAMLVERAERAELEASRLKGAIVIADQKFDRVVKKGEVSRALLKRCQRHLASAYKNANAGGGGGGGGGGSASKRSVSGGEDGEGPDALGRLLAEITDLLSTPDDSSAGGLVGAGRNIGRPIGAHSGGSDGVPFSEYEKVIGQLKEELSRTKVALVVTAKEVVEVRGDLARDDEIFAEKLKEIRKLQKHNERLEGLIVSRNRDIPLSVAASMVLASRPQTAQRGYHTHAHAQLGDANRGEYTYAEGVSGLVSARPPSGAMSLPPSTPGGNVIAMGTYDAESVRPQSERRRNGQRGGLVEGVATSNTVGGVASSQHTTSQVHALRMDEQSSAVSAASPRVAPSSSSMTQSRQGIRGSLAKFGIASQGGLVEVDGARDTESPSLQSSAVQIPMSAASRPDTGAHPPPASNRRHPSFRSALGVAHAAIGDDAQLPQVPHPPPSGMARAQSAAQLRLPTSTQQHTGDGVSRSRAGVRVGSPSSAPVMASHRARPATASAAIDALSRDMSVMSPHSIAGSERSCSQLLAWEMEDKDDAVAPVGSDDDFIDDEESEMSSDSMG* # ORIGINAL: g10842.t1 original gene structure, not modified by PASA NODE_1924_length_8516_cov_41.8514 AUGUSTUS gene 7627 8314 . + . ID=g10842;Name=g10842.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS mRNA 7627 8314 . + . ID=g10842.t1;Parent=g10842;Name=g10842.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 7627 7868 . + . ID=g10842.t1.exon1;Parent=g10842.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 7627 7868 . + 0 ID=cds.g10842.t1;Parent=g10842.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS exon 7987 8314 . + . ID=g10842.t1.exon2;Parent=g10842.t1 NODE_1924_length_8516_cov_41.8514 AUGUSTUS CDS 7987 8314 . + 1 ID=cds.g10842.t1;Parent=g10842.t1 #PROT g10842.t1 g10842 MQAHTAIRRPQQRSSADYGMRFIIDACHNSLPESAKPTLYEVPVELGPMPRPMLERLPELEALHVALKEADLADVVWAYGRDRYVAANERLKELCDRFRKNSELPASVLGDMKLVRPLGDNVLRVVWRASPEGDGSGESVLVHADSPTALVLRFGLWKAPNIEELGTGAQNECVTLVSTIEKLKGNVNA* # ORIGINAL: g11845.t1 original gene structure, not modified by PASA NODE_2151_length_7494_cov_37.528 AUGUSTUS gene 256 4207 . + . ID=g11845;Name=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS mRNA 256 4207 . + . ID=g11845.t1;Parent=g11845;Name=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 256 411 . + . ID=g11845.t1.exon1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 256 411 . + 0 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 707 804 . + . ID=g11845.t1.exon2;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 707 804 . + 0 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 1042 1237 . + . ID=g11845.t1.exon3;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 1042 1237 . + 1 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 1562 1693 . + . ID=g11845.t1.exon4;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 1562 1693 . + 0 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 1958 2087 . + . ID=g11845.t1.exon5;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 1958 2087 . + 0 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 2395 2593 . + . ID=g11845.t1.exon6;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 2395 2593 . + 2 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 2786 2959 . + . ID=g11845.t1.exon7;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 2786 2959 . + 1 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 3147 3216 . + . ID=g11845.t1.exon8;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 3147 3216 . + 1 ID=cds.g11845.t1;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS exon 3494 4207 . + . ID=g11845.t1.exon9;Parent=g11845.t1 NODE_2151_length_7494_cov_37.528 AUGUSTUS CDS 3494 4207 . + 0 ID=cds.g11845.t1;Parent=g11845.t1 #PROT g11845.t1 g11845 GVIKLSIAELRKYFKVGDHVKVTAGKFEGETGHVTSVTGEIVDLISDLNSKELKVFSRDLELATEVASGLDSLGQYGLYDLVELDAHRIGVIVKVERESLRVMDQNGRIYGVRLQEISRRLAQRNAVTLDSQRNTIKEGDVVQVTEGPLSGKQGIIKHIFRSTVFVHSRDVAENQGIVAVRSATLLLAGARPKQPMGGVGGQNVQSSPRITLASPAPHRDGPQPPPGQQRGGPQGQPGAAPGGGRGRGMHRNSHFLNKTVAITGGPHKGLKGIVKDATDATVRVELHAKNRMISVDANSVTILDGGMSRVTSAMPSYARSSNIPFGAQTPAYGSRTPMHDGGRTPMHDENPAWDPTYHNNPSTPSVRGDDHYGDRSDRHRMPDTPQGRYAVQTPATPGSTAGSNYSSYSRGGASGAHGHASSAYEMRTPAPHGDTPQTPAPGGYSAPTPMGRHDHVPPTPGAHSYHAPETPLPFQSHTPASTVYNIDTPAPQMPGGYGSTSGVPPTPAPGYNVQTPAPAAAAPSWVEEGLEVNFRGESGKVQEVRSNGTCSVLMSRRRIQTNVPFSDLVPVRPAMGDRARHIGGGGAGQAGTVQSIDGNTAIVLVDGAPAIFNLDELCRVNQ* # PASA_UPDATE: g11846.t1, single gene model update, valid-1, status:[pasa:asmbl_3630,status:12],[pasa:asmbl_3631,status:12], valid-1 NODE_2151_length_7494_cov_37.528 . gene 4397 7368 . - . ID=g11846;Name=g11846.t1 NODE_2151_length_7494_cov_37.528 . mRNA 4397 7368 . - . ID=g11846.t1;Parent=g11846;Name=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 7171 7368 . - . ID=g11846.t1.exon1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 7171 7368 . - 0 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 6744 6877 . - . ID=g11846.t1.exon2;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 6744 6877 . - 0 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 5937 6349 . - . ID=g11846.t1.exon3;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 5937 6349 . - 1 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 5473 5642 . - . ID=g11846.t1.exon4;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 5473 5642 . - 2 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 5157 5231 . - . ID=g11846.t1.exon5;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 5157 5231 . - 0 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . exon 4397 4989 . - . ID=g11846.t1.exon6;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . CDS 4759 4989 . - 0 ID=cds.g11846.t1;Parent=g11846.t1 NODE_2151_length_7494_cov_37.528 . three_prime_UTR 4397 4758 . - . ID=g11846.t1.utr3p1;Parent=g11846.t1 #PROT g11846.t1 g11846 MHANPFCALQCHRSLVRLIAAVKGKVVDSLAPSVSEMLVRGREVTLGVFGRHEMVISEPLPPSAIHKGVYDSCAKWDLREAVLQQELILYLASFVGSDPRMFEGILRVRIGCIPLDCILTLVPLTPQLMNLSPFDTKNLVRIVLSDAGVDAPPDRTLQFKGDGSANSSSNSSNKAAPAPISVPSSSSSSQRQRDTGITREGSLARDAAPPSDIIGMIAGSTSGSHGKWMRRRQLDGALNRVSRDFYPKVWRLLERCPGGLSFCDIYLPQNPTVSDMTPNEKNFAIKVETLLNAVSPPEYRQIIVELLTILASMLERNSELVVHERIDLDKIARDAMADFYRAEMATMPPADASPSQSSVESERALALFCSTPPSGRRGTAILLSRAALRVMDAAIDGVGEGGCALS* # ORIGINAL: g2898.t1 original gene structure, not modified by PASA NODE_4511_length_1521_cov_37.047_potentialcontaminant AUGUSTUS gene 136 386 . - . ID=g2898;Name=g2898.t1 NODE_4511_length_1521_cov_37.047_potentialcontaminant AUGUSTUS mRNA 136 386 . - . ID=g2898.t1;Parent=g2898;Name=g2898.t1 NODE_4511_length_1521_cov_37.047_potentialcontaminant AUGUSTUS exon 136 386 . - . ID=g2898.t1.exon1;Parent=g2898.t1 NODE_4511_length_1521_cov_37.047_potentialcontaminant AUGUSTUS CDS 136 386 . - 0 ID=cds.g2898.t1;Parent=g2898.t1 #PROT g2898.t1 g2898 MDYFAAVGGYVKAILTNSDYLIYPDETNEDLIRRFYTPKYGEDSVQCEATAEILIPLQHSKPSSNNGVLLLIQSSLSLCGRIW # ORIGINAL: g79.t1 original gene structure, not modified by PASA NODE_3679_length_2970_cov_36.8104 AUGUSTUS gene 2 135 . + . ID=g79;Name=g79.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS mRNA 2 135 . + . ID=g79.t1;Parent=g79;Name=g79.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS exon 2 135 . + . ID=g79.t1.exon1;Parent=g79.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS CDS 2 135 . + 2 ID=cds.g79.t1;Parent=g79.t1 #PROT g79.t1 g79 APTPTMASWQLWIVDKDMKPVSVVRMADVIGAVDLAYPMQQEE* # ORIGINAL: g80.t1 original gene structure, not modified by PASA NODE_3679_length_2970_cov_36.8104 AUGUSTUS gene 666 2806 . - . ID=g80;Name=g80.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS mRNA 666 2806 . - . ID=g80.t1;Parent=g80;Name=g80.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS exon 2558 2806 . - . ID=g80.t1.exon1;Parent=g80.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS CDS 2558 2806 . - 0 ID=cds.g80.t1;Parent=g80.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS exon 666 2444 . - . ID=g80.t1.exon2;Parent=g80.t1 NODE_3679_length_2970_cov_36.8104 AUGUSTUS CDS 666 2444 . - 0 ID=cds.g80.t1;Parent=g80.t1 #PROT g80.t1 g80 MQNKAKPDAESRLEWALDLADTGLDIPAMLTPEEIAAISFDEPLFVYLSMVYQAAIEVGLVEDTASLGASKSRVVRKSASAGQISSANGSAPVLPRRASEIFHARAQQRRASLVKEDSLVESVEEEEAHGFHSIRALHEFQNRQQQKQQQQQQQQQQQQDAVSDDQHQHTIETRDAQDVKKKEKGTVEKENTEFLRTNSPSISTAAIAAAESPSESAVHSSTPGNKESRQQQHSLPEVVVSDALQDSVASPVPAITSSARSAASHAPDDDSGDDHGDAVQDVSTEPPSSSTPRSASNNGRHSSTSATSNSVNGSASAEQLERARQSIVGMERVQERLVRDLLSASAEYSYASVHANGGGVHHDHDDRSVASGEGNGDGNEALVRVREGLTRMLMAPSEMEVRVRDVIDAIRGTRARGIEPGMSSDHADDAYSCAYGDGSDGPSNRRLAYEVDALRAEMRRLAASTPFGGGAGSLSSAPLSPSSPGVGKALPAFGAGVASGELRAEMHRLTSSVLDEFRRENDAMHERIGQLVAALDEERKARVCVELRLREVLGDEAADAGADGTLSTRGDADPAESPRVGRKLLGVAELREEVDEKISVALDAQSVRIHAALADLRRDILALAAVVARAIGGRSLEELFVSVVRALFALSLFVVLVVVAADYGYIKRISPIAHV* # PASA_UPDATE: g9471.t1, single gene model update, valid-1, status:[pasa:asmbl_602,status:3], valid-1 NODE_115_length_38276_cov_40.8075 . gene 10549 13711 . + . ID=g9471;Name=g9471.t1 NODE_115_length_38276_cov_40.8075 . mRNA 10549 13711 . + . ID=g9471.t1;Parent=g9471;Name=g9471.t1 NODE_115_length_38276_cov_40.8075 . five_prime_UTR 10549 10642 . + . ID=g9471.t1.utr5p1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 10549 10680 . + . ID=g9471.t1.exon1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 10643 10680 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 10794 10974 . + . ID=g9471.t1.exon2;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 10794 10974 . + 1 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 11312 11380 . + . ID=g9471.t1.exon3;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 11312 11380 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 11590 11661 . + . ID=g9471.t1.exon4;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 11590 11661 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 11880 12015 . + . ID=g9471.t1.exon5;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 11880 12015 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 12219 12331 . + . ID=g9471.t1.exon6;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 12219 12331 . + 2 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 12532 12572 . + . ID=g9471.t1.exon7;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 12532 12572 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 12880 13069 . + . ID=g9471.t1.exon8;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 12880 13069 . + 1 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 13236 13342 . + . ID=g9471.t1.exon9;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 13236 13342 . + 0 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . exon 13540 13711 . + . ID=g9471.t1.exon10;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . CDS 13540 13615 . + 1 ID=cds.g9471.t1;Parent=g9471.t1 NODE_115_length_38276_cov_40.8075 . three_prime_UTR 13616 13711 . + . ID=g9471.t1.utr3p1;Parent=g9471.t1 #PROT g9471.t1 g9471 MPYKICIVGSGNWGSAIAKIIGRNAQRLADVFDTRVNMWVFEEQVNGRKLTEIINQDHENVKYLPGIKLPENIVAVPDLVEAADGADILVFVVPHQFVANLCKQLLGKIKPTTHAISLIKGVDTTHGLALVSDIIRDMLKIDVSVLMGANIANEVAEEHFCETTIGCKTEAMGIVYHQMFDAPYFRVSVVQDTVAVELCGALKNVVALGAGFVDGLGLGDNTKAAIIRIGLMEMIKLTKTFYQGVEDRTFFESCGVADLITTCYGGRNRKVAEAFVKTGKSLDQLEAELLNGQKLQGTITAKEIHGILKEKDLLKEFPLFTTIYRICYEGLPPKQLVEDI* # PASA_UPDATE: g9475.t1, single gene model update, valid-1, status:[pasa:asmbl_604,status:12], valid-1 NODE_115_length_38276_cov_40.8075 . gene 32822 37940 . + . ID=g9475;Name=g9475.t1 NODE_115_length_38276_cov_40.8075 . mRNA 32822 37940 . + . ID=g9475.t1;Parent=g9475;Name=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 32822 32870 . + . ID=g9475.t1.exon1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 32822 32870 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 33125 33408 . + . ID=g9475.t1.exon2;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 33125 33408 . + 2 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 33522 34190 . + . ID=g9475.t1.exon3;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 33522 34190 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 34294 34431 . + . ID=g9475.t1.exon4;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 34294 34431 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 34700 35158 . + . ID=g9475.t1.exon5;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 34700 35158 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 35308 35547 . + . ID=g9475.t1.exon6;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 35308 35547 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 35678 35815 . + . ID=g9475.t1.exon7;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 35678 35815 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 35918 36094 . + . ID=g9475.t1.exon8;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 35918 36094 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 36197 36515 . + . ID=g9475.t1.exon9;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 36197 36515 . + 0 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . exon 36622 37940 . + . ID=g9475.t1.exon10;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . CDS 36622 37820 . + 2 ID=cds.g9475.t1;Parent=g9475.t1 NODE_115_length_38276_cov_40.8075 . three_prime_UTR 37821 37940 . + . ID=g9475.t1.utr3p1;Parent=g9475.t1 #PROT g9475.t1 g9475 MPSYYNRPENALKKATELIDVGKKNVALEALHDVITSRRNRTWQKPLEAILLKFLELCVEQRSAKRAKDGLHQYKNICQSVSLNSLEIVIRHFIKLSEDEAEKARSKAEKTVLELKELMDVEDLDAVETPESLILSAVSGEDTKDRTDRAVLTPWLKFLWEAYRTVLEILRNNVKLEVLYQDTAKQAFQFCLKYSRKTEFRRLCDILRNHLANIGKYPNQANAVTLSNPESLQLHLETRFEQLNVAMELELWQEAFRSIDDIHGLMSLSKKTIRGPLMANYFHKLVKFFYKSENYLFHATAWHKLYTLHKEQKKSLTAEEHRNLASNVVLATISIPLTPRRTETEDTLQADEAAQDKKRRLAALLFLNVIPTRESLIEEMLSKNLLALVPPELKSLYDQVENKFHPLSFAKDVQPILDTIQATEQIAHFVVPVKQIVAVRTLQQLSQVYQTMRIGHLFTLVPYLPRIAIEKLIVDSVNSGTLAIRICHRSQSISFGTDVFIADREITSGPRLQMLEAERMRNQVTRVSERLHKVVSLIHPERNTEHRARKKQALQAVLKSLPDEHRTVLGRKQVIETRKEFIETLNLLREKEQLERKAQQKAAEKRAEQERLEDEARRREEDRRAKELEEVQRLQAFEKIEAMKKTAIGAKALEGINAEDLKDLDADEILAKQVEQIDKEKKELQAKLKNIERKVDHIERAKRIEEVPLLKEEYDKFKVEDREYWVRQQAIYLEKHRQQHHADLEIKARLQRMKPDAEAFLSKLRVRLEKDFQKRKAEHEAMVHEELAKRKKERRLRKQREAEERRQREERERQEREEAEREEREEEERKERQRIEREKKEQEYLEQKARLDEQERVRRLREAEIEERERKEREEREAQREPIRRKPVEDAGDWRGAPRAGFDREREEAPIRRDGPPTRDRYEARGPADREEPSTWRKPVSDERPEPRDWRSARESESRAPAPVRGETRDGVWRPRTERTVEPEQEREPVRARPEEREWRSEAPPRAREERRPEPRWGGRDDAPREERRPEPAREWRSTEAPRETRDWRGSREGAGAGAGSSEPWRPSPREERGPREERAAPREERGPREERAAPREERRPEGGWRDAQRDGARDSPAGGSTWRAAREEREERAPRRDGPPARSVPAEGGNDWRSREAAREGQRGGERTDRESTWRKDGPPAPRDREQREERSPVQPSPSERPPMGDDQWETVTRPGRKPEKK* # PASA_UPDATE: g9473.t1, single gene model update, valid-1, status:[pasa:asmbl_603,status:12], valid-1 NODE_115_length_38276_cov_40.8075 . gene 23249 25099 . + . ID=g9473;Name=g9473.t1 NODE_115_length_38276_cov_40.8075 . mRNA 23249 25099 . + . ID=g9473.t1;Parent=g9473;Name=g9473.t1 NODE_115_length_38276_cov_40.8075 . five_prime_UTR 23249 23330 . + . ID=g9473.t1.utr5p1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . exon 23249 23726 . + . ID=g9473.t1.exon1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . CDS 23331 23726 . + 0 ID=cds.g9473.t1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . exon 23948 24094 . + . ID=g9473.t1.exon2;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . CDS 23948 24094 . + 0 ID=cds.g9473.t1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . exon 24251 24466 . + . ID=g9473.t1.exon3;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . CDS 24251 24466 . + 0 ID=cds.g9473.t1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . exon 24786 25099 . + . ID=g9473.t1.exon4;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . CDS 24786 24944 . + 0 ID=cds.g9473.t1;Parent=g9473.t1 NODE_115_length_38276_cov_40.8075 . three_prime_UTR 24945 25099 . + . ID=g9473.t1.utr3p1;Parent=g9473.t1 #PROT g9473.t1 g9473 MFAHISQLAARNVRIGAGIGAAALIGGSLFAAKSSLLGMSTVAAAASEPAFDANEFRKFRLREVQRISHNTAIYRFDLPTAHSRMGLPVASCIVTKVDGLGENGKPAIRPYTPITSDSTVGHFDLLVKTYEQGVMSKHFANMKPGEFLEIKGPIVKFKYEPNQKKAIGMVAGGTGITPMYQVIQEVLSNPNDKTELSLVFANVAEDDILLRKELDSLAAKHKNFKVHYVLEKPPAGWKGSVGYFSEDLGKKLLPPPTESNMVFVCGPPGMMNAVSGSKNMKDYSQGDLSGILLKLGYNKDNVFKF* # PASA_UPDATE: g9467.t1, single gene model update, valid-1, status:[pasa:asmbl_600,status:12], valid-1 NODE_115_length_38276_cov_40.8075 . gene 449 1127 . - . ID=g9467;Name=g9467.t1 NODE_115_length_38276_cov_40.8075 . mRNA 449 1127 . - . ID=g9467.t1;Parent=g9467;Name=g9467.t1 NODE_115_length_38276_cov_40.8075 . five_prime_UTR 1072 1127 . - . ID=g9467.t1.utr5p1;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . exon 996 1127 . - . ID=g9467.t1.exon1;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . CDS 996 1071 . - 0 ID=cds.g9467.t1;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . exon 708 768 . - . ID=g9467.t1.exon2;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . CDS 708 768 . - 2 ID=cds.g9467.t1;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . exon 449 592 . - . ID=g9467.t1.exon3;Parent=g9467.t1 NODE_115_length_38276_cov_40.8075 . CDS 449 592 . - 1 ID=cds.g9467.t1;Parent=g9467.t1;3_prime_partial=true #PROT g9467.t1 g9467 MGFKDNFIVRFSKWIARVFGICCWLALFGTGGAVVGKEFGIGIYAILIGILVLFLEFVWILKKCTCYTEGGCCDKALSVLNFIDNWKKFIVYV # ORIGINAL: g9468.t1 original gene structure, not modified by PASA NODE_115_length_38276_cov_40.8075 AUGUSTUS gene 3257 4807 . + . ID=g9468;Name=g9468.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS mRNA 3257 4807 . + . ID=g9468.t1;Parent=g9468;Name=g9468.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 3257 4807 . + . ID=g9468.t1.exon1;Parent=g9468.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 3257 4807 . + 0 ID=cds.g9468.t1;Parent=g9468.t1 #PROT g9468.t1 g9468 MDAELTSATQSANEFLAQLGALWKKHPTAAHRLSADVVDKMTRGPQQIPLSPVSSVTIASSSNHDCVIGGTDESLLSCTQQDFFETADTVLGGGVGVLDGQCDMPGEPVPIAVGVELNTDVLAPIAQMTGVAFWSSYTQANAFFPPLEGTHIPTPDAVGLIVQALENEAVIEESFLALDHNQHHNTDNLAKCGDATTGMCEDTTPTHGGIASDDGPTHVFYPSDLFTAPQDVAENAHSRSTKCDDGMLSDSGAPLTGEQCVFGRTTMGYHAFVPYASVLQHQQQQQELQCRQSVAKTGKQLPMHSRKFSGRTLLGAGTPSSSHTLKRLTTPGGRASALQGPNWTVLTPFQDAAHNIPLDYEDLDNGAMLIEFVLGLMVNCKSSPIGIRLKEGLQIGVALQKAKTACDAAMIALNKMWAAHKEWRKNTKTAANDNNSRKGSVRNVSKSRRCIHHANDGSTINAVSVCLTAQVGKQGGLKWSTLAWFTFQVPRNDGPVTCIRIDFDNVPKSNKKSVAN* # ORIGINAL: g9470.t1 original gene structure, not modified by PASA NODE_115_length_38276_cov_40.8075 AUGUSTUS gene 7781 9625 . - . ID=g9470;Name=g9470.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS mRNA 7781 9625 . - . ID=g9470.t1;Parent=g9470;Name=g9470.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 8086 9625 . - . ID=g9470.t1.exon1;Parent=g9470.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 8086 9625 . - 0 ID=cds.g9470.t1;Parent=g9470.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 7781 7911 . - . ID=g9470.t1.exon2;Parent=g9470.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 7781 7911 . - 2 ID=cds.g9470.t1;Parent=g9470.t1 #PROT g9470.t1 g9470 MTRLRQALTSSINVRLLWPKLINLFLSGGYACLFPYLSIFYDGRGIGKVQIGILGALNPLVSAVGSPILMFMADRGRCHLAVITVTLAASSLLNMAQLFPREFGGIAALVCASAFLGSPVGSIIDTATLTLLGDNKDDYGKQRLWGAAGWGIMAFVVGAMIDRWGIVSAFATYGVFMLISLVSVVVMPMPYGGQASRSVGGIPSSDDVHLEEELDVLGPSVCSTMELTERDVGGFSSDSERGYVGTAATPGRAGGAVAPLDDGMTKQSDYIEKKSLRAGDVLRIFGTFDRAVFFVVMVFVGIFASTIGSFLFLHLRALGANDALLGLSLTVTCAAEMPVFFYSGALIRRLSVQASMCIVLAAFALRMGYYTFLVSPWWVLPVETLHGITFGLMWAAAVSHVDACAPEGLKGTAQGILGGSYSLGQAIGSVAAGTLYQRYGAVVMFRVASATAVCALALYAVSCCWARGCGSRVALPGDAGKRHAYTRLQNVDEGESSETDSDATARARGEWRKENNNGPNVAVVVIATAAGDSPVHSRVELRRDEGFASGSEEMLV* # ORIGINAL: g9474.t1 original gene structure, not modified by PASA NODE_115_length_38276_cov_40.8075 AUGUSTUS gene 25120 32124 . - . ID=g9474;Name=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS mRNA 25120 32124 . - . ID=g9474.t1;Parent=g9474;Name=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 31996 32124 . - . ID=g9474.t1.exon1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 31996 32124 . - 0 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 31556 31844 . - . ID=g9474.t1.exon2;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 31556 31844 . - 0 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 31044 31436 . - . ID=g9474.t1.exon3;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 31044 31436 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 30687 30723 . - . ID=g9474.t1.exon4;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 30687 30723 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 30378 30517 . - . ID=g9474.t1.exon5;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 30378 30517 . - 1 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 30091 30171 . - . ID=g9474.t1.exon6;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 30091 30171 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 29726 29835 . - . ID=g9474.t1.exon7;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 29726 29835 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 29267 29438 . - . ID=g9474.t1.exon8;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 29267 29438 . - 0 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 28434 29018 . - . ID=g9474.t1.exon9;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 28434 29018 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 27892 28235 . - . ID=g9474.t1.exon10;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 27892 28235 . - 2 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 27349 27581 . - . ID=g9474.t1.exon11;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 27349 27581 . - 0 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 25588 27184 . - . ID=g9474.t1.exon12;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 25588 27184 . - 1 ID=cds.g9474.t1;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 25120 25278 . - . ID=g9474.t1.exon13;Parent=g9474.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 25120 25278 . - 0 ID=cds.g9474.t1;Parent=g9474.t1 #PROT g9474.t1 g9474 MASEGAGSGLAGAIPPEEAYTIGGIQVKFPFKAYPSQISMMDRIIKALQTSKHALIESPTGSGKSLSLLCAALAWQRAEVQKMKDKVALAANTAREEAIANLAAQQRQAQLVIANGGQPGAFDVGFFDLKGSAPKDAQNAAQPKQEVGAINKNNNNNNDSSNNNNNNGNANNADNNDDDDFQPAKKPRTAPSAPAPAAAPLAPAPPTIDPRILTMDPAFVEAVANAAASNAASLEAQSSPSLRPRIYFGTRTHKQIAQIVRELRRSTTYRDCRMAILSSREHTKDLLEENLCPYKFRVDHMKVHRDLLPGGRLAVWDIEDIVKLGRKEKACSYFTARELAADADIVFCPYNYLIDPLIRHQMSISLDNNVVIVDEAHNIEDAAREAASFEMNQGAVKEAIADIDRVLQATNFISQHTLLRSLLVAMAEVVSEEPQSMAGIEYEKMRKIWTGPEAAATLAIHNVNETHVKHLAGVLTDLMERTNKLVELRAQRDNNEPPVVKIAGSTMQLISGILAVLDSMLGNAGRNMLDYRMVLLKSAEHVPRQNRRRNAAAADWSLTLAFWCLNPAVAFASLGGKARSVVLTSGTLSPMNSFASELGAEFPVKLEASHVVDPSRVFVGVLAFGPSGLSLNASFKNAETFAFQDEIGMTLLNVCHRVPNGVLCFFPSYTMLERMSTRWKTTGLWAELEGIKAVFDERRNSDKVDFDNSLKDFYEKVVGGGALLLAVCRGKVSEGLDFADANARAVITVGIPFPNVKDTQVELKRAYNDAFTRSRGLLSGQEWYEIQAFRAINQALGRCIRHKNDWGAILMIEERFRMTKYQNSLSKWVRTKVASFDTFDYAMRSLDDFVQRRTECDATEAAAARSQAAQIQSQGQIAAPAPQTQDDVQHTQAMYSLFTAAQGRRAAQERRATQAQPPISAQSKNVALVRDETTIQMMAVPQEANFIIDRNPAAAAPSMWPSPPAVLPTATAPMPTEAVDAVPQAHATKEEEYDSDAVRGLEDYVERAWQTTTAPEEIAALESLLFEIIADAKAKGEIETRDWKKFPLPALPIVNSAVTAGTPCVARMPASGAVSTAPALDVAAGERLPLESAPKPANPYRKTPSSTQPLPSQSDAQLRTPQHQSQHKHQDEQEEQRHKEPQGNAQQENDGADSGPPTREASPMPSGNAPTHSAVSKPLRPLDVEVWGRVAETAGRTSKRPREHVTLEYDAEDVQPLQDKENRASGDDVTSGTVPSTGGVYKGVIGCSKCGRAFAKCNGVAPQGVRRVKAYVDLLERHGRRRNQDGSWDGDGPLSAWVVTDVDMVFDSRVFDRHEGLKAAGPFFPNAVWCADDRVCVVPLVCSVCHGEHVLGLYFAAAAGVSPYRDAEGEVWIVPSVVTYTQSDTLSDSRRASQTPAKRRRVLRGRETGADRQAMRVFDDDE* # ORIGINAL: g9472.t1 original gene structure, not modified by PASA NODE_115_length_38276_cov_40.8075 AUGUSTUS gene 14098 22638 . - . ID=g9472;Name=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS mRNA 14098 22638 . - . ID=g9472.t1;Parent=g9472;Name=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 22627 22638 . - . ID=g9472.t1.exon1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 22627 22638 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 22487 22535 . - . ID=g9472.t1.exon2;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 22487 22535 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 22242 22381 . - . ID=g9472.t1.exon3;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 22242 22381 . - 2 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 21276 22079 . - . ID=g9472.t1.exon4;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 21276 22079 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 20935 21033 . - . ID=g9472.t1.exon5;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 20935 21033 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 19883 20503 . - . ID=g9472.t1.exon6;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 19883 20503 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 17773 19720 . - . ID=g9472.t1.exon7;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 17773 19720 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 16573 17480 . - . ID=g9472.t1.exon8;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 16573 17480 . - 2 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 16193 16375 . - . ID=g9472.t1.exon9;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 16193 16375 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 15809 15955 . - . ID=g9472.t1.exon10;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 15809 15955 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 15566 15652 . - . ID=g9472.t1.exon11;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 15566 15652 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 15359 15430 . - . ID=g9472.t1.exon12;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 15359 15430 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 15074 15202 . - . ID=g9472.t1.exon13;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 15074 15202 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS exon 14098 14814 . - . ID=g9472.t1.exon14;Parent=g9472.t1 NODE_115_length_38276_cov_40.8075 AUGUSTUS CDS 14098 14814 . - 0 ID=cds.g9472.t1;Parent=g9472.t1 #PROT g9472.t1 g9472 MESYKIVVISLAGGPDSGTDAEIASLHIACCARMHGRREVLCVERTEKAVVHVEHVAMKQPFDPIPDTVFAAEGVVVVYSTLCRSTYQLVPVFVQRLSTDAAPGGRRPRAFVVGGYCSDDEDVQLDAREVSVGDAGELSTALGCFVLEFVGESVSEDIAEQQRRATDAASDPTGKGGDEDVEGHERDATGRSFRACMVAIARALRNESHAEKSLLRVLQSKVRQEMALRRKLSTVILAYDKIPGCVYDDHLLQQVAQSDWRLGVLRERIRATADGSYAPVDVLEIPSAPPGLRLGVEPRAWAREREASPERRQIRAAELRARLEKEKKMREGLGKLISVYKTIPRNAHGNVLNEIRDSDLRHGQINRELASIGEPPVSTMQIAMPVMREDGAERTAGVAEGRRFTDSGPPKLSRNLNRSNARRGHGATSLRLLGRLTVRIRDCKHLCRMGDPFAIVSVGKQECATKKIKKTESPLWDEQFIFDVTVACKDVVVSVNDWKLFLKDDFLGMVSVPVSSLPEGRAVTETRPLLTRTGEKAGGELTMTIKFEKIRETITVADFEILSVVGRGAFGKVMQVRKKDTGRILAMKVVRKDVGDGKHHAALVQEKDIMSRLSHPFITNLQFTFQSESKLYFVLEFVNGGDLYFHMKRQGKLSEERTRFIAAEILLAIEYLHSLNIAYRDLKAENVLLDLFGHVRLVDFGLAKMGLGQGDKTTTMCGTPDYLAPEILLRNSYDRSVDFWALGVLMWEMLAGHPPFESDTVDGTFKNTLFRPIGVAMNLLKAEVASLSSETEAILLDLLERDPKRRLGSTTGAKAVRAHRFFASIDFEKLLLKQISPPFKPRVKGEKDTRNFDSRVTKQQARDTLIEEAPAEEDGVASLFRDFSFTRRATVIAGKQTPAAASSQQRSRPAANAHASPSLSSSSLSNASPLASASAPKPKQTDEMPTTKPPPPTGPIPSSVLTEFSSTHGHAVAHQQQHHHHQQHQQQHHTPTFTPSSAMGSATAMPPPPLIPRSSSVSSPSQAQAQAQLHTTQGPDRSWLPTNTAAVASNASPPIPARPPKPDHLRQQKVGASAGAAPPSAPDEPAPPPRPPKKRAPPPIPGQPQQDEAHAPPAALMSAVAQKPPPPALPSVTLSDSDTVRRVSHPALLVAPPKAPTTAGSVSARPTPASTVPASHGGQDNSYLDVRSAIAAAASGAVESDVPGLLLANLDLVVSVSEALSNIIDEEEFAFAVASTFRDSFHESEFVRAILRRVLSQTNASLGSAHDADSSMGRRILRAYGRCVAGRFQRELVEGCTADLANTILGMCRDDNDAQTIARTCIMMLDAIVVNEGAVPGPVRRACSVAASLASPPPDGDSQAPSVASPIPARNTRQLSSAGLPPSHALSAPPSASSGVGDSPKPIARNNSSHTLPGITVIGSVAPSNANTYAGRCACAQVVLDAVLFPAIVHPNNILGEQVAAARHYLVEKHLETAAGVLAWAARTEAYDPASPSLQEFDGPSQLAISIFAKTGGLGKLSKYLSRVAMEHPSTPSSLDAERRPSVHLGDMATLDGTLESLSNVNRHLMRMVTFLSAALDMSPDGCQLNELTVSPTQRDALLDIATRAARECRGRLKDLDPEGARIDIRSRDGGVFSVVAEFDLDTGRVRPRRVGVFPELVALYDFKTRELLGMLSTKSVPAWASGDGFIIIEVSSGSKTVESHVFVLRTRDSRQLSDCLASVFGAKTSYRLRSITTFLGSTALVQETSSRALMSPLSMWERQVTLRPQDARPPAKHAGKGDGDDDSSQPRPLSDDVSDQTKEPDADAGAEDIGLACTRALSATDKLRACVTAFAQPPPRHVASVAVACILAIDAAEASIGALRDEWLRDGRVRVGAISRVEILTAEAVREVHWYANVLVLRPYNFDKPAEIDRSLPGRPSMPVGSLRSSLAMTLWAAEGAWRALADVAAKGLDRRVRLLRGDTAGDLMSSTNE* # PASA_UPDATE: g9469.t1, single gene model update, valid-1, status:[pasa:asmbl_601,status:3], valid-1 NODE_115_length_38276_cov_40.8075 . gene 5563 7563 . + . ID=g9469;Name=g9469.t1 NODE_115_length_38276_cov_40.8075 . mRNA 5563 7563 . + . ID=g9469.t1;Parent=g9469;Name=g9469.t1 NODE_115_length_38276_cov_40.8075 . five_prime_UTR 5563 5632 . + . ID=g9469.t1.utr5p1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 5563 5682 . + . ID=g9469.t1.exon1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 5633 5682 . + 0 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 5857 6053 . + . ID=g9469.t1.exon2;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 5857 6053 . + 1 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 6349 6576 . + . ID=g9469.t1.exon3;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 6349 6576 . + 2 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 6717 6750 . + . ID=g9469.t1.exon4;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 6717 6750 . + 2 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 7031 7179 . + . ID=g9469.t1.exon5;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 7031 7179 . + 1 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . exon 7308 7563 . + . ID=g9469.t1.exon6;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . CDS 7308 7462 . + 2 ID=cds.g9469.t1;Parent=g9469.t1 NODE_115_length_38276_cov_40.8075 . three_prime_UTR 7463 7563 . + . ID=g9469.t1.utr3p1;Parent=g9469.t1 #PROT g9469.t1 g9469 MPGRLEGKVAIITGAGSGLGREASLIFAREGASVVCADVVDKAGEETVEMIKKEGGNAGYVHADVSKAADCENMVKFAEATFGKLNVIFNNAGIMHPADDNAETTEERIWDLTMNINLKGVWLGCKYAIPAIRRAGGGSIINTASFVAVMGAATPQVAYTASKGGVLAFTRELAVIHARENIRVNALCPGPLRTPLLMDFLNTDEKKERRLVHVPMGRFGEAYEIARAALFLASDDSSYITGTDFMVDGGLTAAYVTPLGETKSVPSQYP* # ORIGINAL: g10908.t1 original gene structure, not modified by PASA NODE_1534_length_10650_cov_41.3918 AUGUSTUS gene 168 485 . - . ID=g10908;Name=g10908.t1 NODE_1534_length_10650_cov_41.3918 AUGUSTUS mRNA 168 485 . - . ID=g10908.t1;Parent=g10908;Name=g10908.t1 NODE_1534_length_10650_cov_41.3918 AUGUSTUS exon 477 485 . - . ID=g10908.t1.exon1;Parent=g10908.t1 NODE_1534_length_10650_cov_41.3918 AUGUSTUS CDS 477 485 . - 0 ID=cds.g10908.t1;Parent=g10908.t1 NODE_1534_length_10650_cov_41.3918 AUGUSTUS exon 168 283 . - . ID=g10908.t1.exon2;Parent=g10908.t1 NODE_1534_length_10650_cov_41.3918 AUGUSTUS CDS 168 283 . - 0 ID=cds.g10908.t1;Parent=g10908.t1 #PROT g10908.t1 g10908 MPKVIDAAPDVNLVLAATQTASEFPKPSQTVYAYGTAGFRT # PASA_UPDATE: g10911.t1, single gene model update, valid-1, status:[pasa:asmbl_1896,status:12], valid-1 NODE_1534_length_10650_cov_41.3918 . gene 7550 10503 . - . ID=g10911;Name=g10911.t1 NODE_1534_length_10650_cov_41.3918 . mRNA 7550 10503 . - . ID=g10911.t1;Parent=g10911;Name=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 10168 10503 . - . ID=g10911.t1.exon1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 10168 10503 . - 0 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 9905 9970 . - . ID=g10911.t1.exon2;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 9905 9970 . - 0 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 9635 9716 . - . ID=g10911.t1.exon3;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 9635 9716 . - 0 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 9168 9286 . - . ID=g10911.t1.exon4;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 9168 9286 . - 2 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 8836 8992 . - . ID=g10911.t1.exon5;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 8836 8992 . - 0 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 8555 8604 . - . ID=g10911.t1.exon6;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 8555 8604 . - 2 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . exon 7550 8292 . - . ID=g10911.t1.exon7;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . CDS 7906 8292 . - 0 ID=cds.g10911.t1;Parent=g10911.t1 NODE_1534_length_10650_cov_41.3918 . three_prime_UTR 7550 7905 . - . ID=g10911.t1.utr3p1;Parent=g10911.t1 #PROT g10911.t1 g10911 MCAEIDRLRAALYGDALGPSASGFAEADTNAIASARPWFSRVFAPTEESVRIVSCEKDRLVAEMRTRRELADALRARIALLWVRLAIPDGERAADLLATADDGVVTSAMLHGLEAEHLRLRKIERERLRAAVDEAMRKLNLLWDDLYVPEDRRRAFYGAIEDVYSEEGLDAINVESGRMRVLVEKCRHLIKMVHARKTFIREMEEFEVSASDPRRLFTHSAQLLREEKFRKTAYPTLLSMEENLKQALIAYEKENGEPFVYEGAAYSDILHSEVSDRFLDETVFGILRASPSRPSSTGSSSSLLHQLAPSPSPSQSPSTDLPRGRSASSGPSYVSQLRHQDSAPAAYNSSSSPATPSTSASASASASPMAASRIPQTKTRLVRSATTGPSGSPGQVSR* # PASA_UPDATE: g10909.t1, single gene model update, valid-1, status:[pasa:asmbl_1895,status:12], valid-1 NODE_1534_length_10650_cov_41.3918 . gene 1525 2547 . - . ID=g10909;Name=g10909.t1 NODE_1534_length_10650_cov_41.3918 . mRNA 1525 2547 . - . ID=g10909.t1;Parent=g10909;Name=g10909.t1 NODE_1534_length_10650_cov_41.3918 . five_prime_UTR 2376 2547 . - . ID=g10909.t1.utr5p1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . exon 2373 2547 . - . ID=g10909.t1.exon1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . CDS 2373 2375 . - 0 ID=cds.g10909.t1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . exon 2124 2211 . - . ID=g10909.t1.exon2;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . CDS 2124 2211 . - 0 ID=cds.g10909.t1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . exon 1941 1994 . - . ID=g10909.t1.exon3;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . CDS 1941 1994 . - 2 ID=cds.g10909.t1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . exon 1525 1693 . - . ID=g10909.t1.exon4;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . CDS 1599 1693 . - 2 ID=cds.g10909.t1;Parent=g10909.t1 NODE_1534_length_10650_cov_41.3918 . three_prime_UTR 1525 1598 . - . ID=g10909.t1.utr3p1;Parent=g10909.t1 #PROT g10909.t1 g10909 MDGVYTYFHKDERLVDIVDVAWRLDQLPNPDISVPAAHYLPPEDTDETQQEREERKQMDRKWDDLGLGLVIGRQIAAPR* # PASA_UPDATE: g10910.t1, single gene model update, valid-1, status:[pasa:asmbl_1897,status:3], valid-1 NODE_1534_length_10650_cov_41.3918 . gene 2799 7122 . + . ID=g10910;Name=g10910.t1 NODE_1534_length_10650_cov_41.3918 . mRNA 2799 7122 . + . ID=g10910.t1;Parent=g10910;Name=g10910.t1 NODE_1534_length_10650_cov_41.3918 . five_prime_UTR 2799 3061 . + . ID=g10910.t1.utr5p1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 2799 3064 . + . ID=g10910.t1.exon1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 3062 3064 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 3427 3539 . + . ID=g10910.t1.exon2;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 3427 3539 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 3793 3868 . + . ID=g10910.t1.exon3;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 3793 3868 . + 1 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 4098 4328 . + . ID=g10910.t1.exon4;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 4098 4328 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 4607 4738 . + . ID=g10910.t1.exon5;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 4607 4738 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 4982 5079 . + . ID=g10910.t1.exon6;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 4982 5079 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 5223 5547 . + . ID=g10910.t1.exon7;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 5223 5547 . + 1 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 5719 5841 . + . ID=g10910.t1.exon8;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 5719 5841 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 6042 6302 . + . ID=g10910.t1.exon9;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 6042 6302 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . exon 6552 7122 . + . ID=g10910.t1.exon10;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . CDS 6552 6656 . + 0 ID=cds.g10910.t1;Parent=g10910.t1 NODE_1534_length_10650_cov_41.3918 . three_prime_UTR 6657 7122 . + . ID=g10910.t1.utr3p1;Parent=g10910.t1 #PROT g10910.t1 g10910 MHSTRWYQERTRSEFAREDIVKNIHWDHMLRANMGSDDRVEHLRRLRRQQQERREIETDRMIEETEAQKEQRRREKEQEERLVEALEKQKLEKLREIKIRQMVRENSPELRALEMKLNSAYMNKERTMQIAQKQAYVEQEKSQRVEYARQIDAELRTLQEEEKAAKANRMNKQESYKNVLEGQLKEQEGARQKAYEDFLREKQMIDDIVARIHEEDQKDLEHRLNKQHETKRYIDEFKTQRLHWRQEETARIEEENERIRRYADDQRRRETALQSRKKEADAHKHAVYEQLASKVERTEREKEEMERVRHELYVEEQEQRERDKEMTRIEQTLRQRLALREAHQYQMQIKRQRTQAEADEEEEFRKKMMQKFSEDERLEQMNAQKRRMREAEHRRAIEQLLEERRARRRAEDDERDRESQDRAAMEQNFRKIVEEERQRLLREHANKLAAFLPKGVLRDEKDLALLDEASRREFLARRRDLTEDDFTY* # PASA_UPDATE: g9403.t1, single gene model update, valid-1, status:[pasa:asmbl_321,status:12], valid-1 NODE_1084_length_14084_cov_42.161 . gene 8665 10824 . - . ID=g9403;Name=g9403.t1 NODE_1084_length_14084_cov_42.161 . mRNA 8665 10824 . - . ID=g9403.t1;Parent=g9403;Name=g9403.t1 NODE_1084_length_14084_cov_42.161 . five_prime_UTR 10792 10824 . - . ID=g9403.t1.utr5p1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . exon 10447 10824 . - . ID=g9403.t1.exon1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . CDS 10447 10791 . - 0 ID=cds.g9403.t1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . exon 10212 10281 . - . ID=g9403.t1.exon2;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . CDS 10212 10281 . - 0 ID=cds.g9403.t1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . exon 9918 10048 . - . ID=g9403.t1.exon3;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . CDS 9918 10048 . - 2 ID=cds.g9403.t1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . exon 9257 9691 . - . ID=g9403.t1.exon4;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . CDS 9257 9691 . - 0 ID=cds.g9403.t1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . exon 8665 9039 . - . ID=g9403.t1.exon5;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . CDS 8893 9039 . - 0 ID=cds.g9403.t1;Parent=g9403.t1 NODE_1084_length_14084_cov_42.161 . three_prime_UTR 8665 8892 . - . ID=g9403.t1.utr3p1;Parent=g9403.t1 #PROT g9403.t1 g9403 MIRQRACVHRKIPSPSFQAYISATSALVPFIICLALTVIAVLSATNSCDSLDPSSDCDTTISMASTAARALTQRAVSRIVTTRQQKEGGGFLVRRAIGSLVSDEEADPFLMLDHMGPVVYPPGKAVGAPDHPHRGFETVTYVLEGGFHHKDSKGNEGNLTDGWVQWMTAGSGVIHSEMPTDELIKKGGRMEGFQLWVNLPAKDKMIPPRYQDTPPEKIPKTKSSDGLVSVSIIAGQAFGVNAIIETRSPMYYLDVVIQPGGEFVEPIGEEYNSFAYVYRGKGVFGADSKAAQDGQVVVFGKGTGVRAAAPDTECRFLLLAGVPLKEPVARYGPFVMNTEEQLREAFADYRSGRFGDIPGAEERYEKTRRANEHKA* # PASA_UPDATE: g9404.t1, single gene model update, valid-1, status:[pasa:asmbl_322,status:12], valid-1 NODE_1084_length_14084_cov_42.161 . gene 11254 14057 . - . ID=g9404;Name=g9404.t1 NODE_1084_length_14084_cov_42.161 . mRNA 11254 14057 . - . ID=g9404.t1;Parent=g9404;Name=g9404.t1 NODE_1084_length_14084_cov_42.161 . five_prime_UTR 14056 14057 . - . ID=g9404.t1.utr5p1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . exon 13744 14057 . - . ID=g9404.t1.exon1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 13744 14055 . - 0 ID=cds.g9404.t1;Parent=g9404.t1;5_prime_partial=true NODE_1084_length_14084_cov_42.161 . exon 13414 13581 . - . ID=g9404.t1.exon2;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 13414 13581 . - 0 ID=cds.g9404.t1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . exon 13109 13209 . - . ID=g9404.t1.exon3;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 13109 13209 . - 0 ID=cds.g9404.t1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . exon 12609 12930 . - . ID=g9404.t1.exon4;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 12609 12930 . - 1 ID=cds.g9404.t1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . exon 12102 12482 . - . ID=g9404.t1.exon5;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 12102 12482 . - 0 ID=cds.g9404.t1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . exon 11254 11829 . - . ID=g9404.t1.exon6;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . CDS 11284 11829 . - 0 ID=cds.g9404.t1;Parent=g9404.t1 NODE_1084_length_14084_cov_42.161 . three_prime_UTR 11254 11283 . - . ID=g9404.t1.utr3p1;Parent=g9404.t1 #PROT g9404.t1 g9404 IYRLFEDSVRIDKPPNDTPTPAFPTDAGELPQSPPATDPLSPGVPSVAPPGTAAADGDATDSSSDALSGASTIPTRSAKFEVSAYSGQSGVRQLMSSATASGSQIYISFIKDNGNSIDSSDKYFTSVSETIPEDDSAKFTLEGEKLAISSPTMIEIGKDKGDVCASGDKEETEDSDDDVESKEDPWMLQALQIIYTPDQSAPSVQTTYFVPVNRYFGLDGDDTFSSVQAKLIPTTSNTERPADLAGKYSVDILLKSTSTFAPIGGNGAILVRLTTEGANGRQEIIDMLYTGNLQGAPKTLSVVADHWAAGDPKSVQLSIDIDDQGNMIGGDFLDVDTIFVSYSALAKNSFFKAPGFQLSARLREAGKGGKMTDSADLVADTPTGVSYVIKVRIYSMQELVQGYLKFEVVGTNGTVTGELLEAYRGNRYYSIKLTQFVPSTPGATHIGGVTSINFHPFRPASGQTEKEKIFTVQVNFFTLEIVYPVSIAGSSANRYGNNLAPFRYYQEFKSPSGLSFTLIQTNKLADLKNYPLSSLACWMTDAFNESGAAALYYGERNFQDKYNVRKWAYEQKPSPAAPDTLFDDKLPEPAVRWFPITAKCPRTVIFPKK* # ORIGINAL: g9402.t1 original gene structure, not modified by PASA NODE_1084_length_14084_cov_42.161 AUGUSTUS gene 5194 7632 . + . ID=g9402;Name=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS mRNA 5194 7632 . + . ID=g9402.t1;Parent=g9402;Name=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS exon 5194 5846 . + . ID=g9402.t1.exon1;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS CDS 5194 5846 . + 0 ID=cds.g9402.t1;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS exon 6088 6227 . + . ID=g9402.t1.exon2;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS CDS 6088 6227 . + 1 ID=cds.g9402.t1;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS exon 6545 6638 . + . ID=g9402.t1.exon3;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS CDS 6545 6638 . + 2 ID=cds.g9402.t1;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS exon 7048 7192 . + . ID=g9402.t1.exon4;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS CDS 7048 7192 . + 1 ID=cds.g9402.t1;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS exon 7555 7632 . + . ID=g9402.t1.exon5;Parent=g9402.t1 NODE_1084_length_14084_cov_42.161 AUGUSTUS CDS 7555 7632 . + 0 ID=cds.g9402.t1;Parent=g9402.t1 #PROT g9402.t1 g9402 MVSDSTRRGACADAFSLSMYTIDNASKYLKMPYRLSVTFWTLSVMSSDYRAFLIGQQAGTEKSTPRYFAFGCDSPNSDYSTPYSSSRGVNASTANGTVGGVCVPTIADLTALLAGDANAFVVRGAPVLMQPNVRYTIAAIFSANKVTMAVSMFPPSVTPFLSLRLTTIDATLPIPLDKDFPEMVPLRSWGLSTGLNANGNLTCMTAFAMLTMTHPVDTYYKPTSIGTYFWETFDGWTRSLSTPIRDPSRHMIDPSSLWDVWGNPDGNSPIPNGVKEAFPALADLHMPIISDASAGSRGPSAAKLYAGFSPSAAYTAKALFAFTEDGVANFGHILQGYTSKGRDTSATIQKALYGRLLSHGEKECNDAMF* # ORIGINAL: g10465.t1 original gene structure, not modified by PASA NODE_3316_length_3751_cov_42.7995 AUGUSTUS gene 1270 3594 . + . ID=g10465;Name=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS mRNA 1270 3594 . + . ID=g10465.t1;Parent=g10465;Name=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 1270 2061 . + . ID=g10465.t1.exon1;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 1270 2061 . + 0 ID=cds.g10465.t1;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 2399 2485 . + . ID=g10465.t1.exon2;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 2399 2485 . + 0 ID=cds.g10465.t1;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 2776 2871 . + . ID=g10465.t1.exon3;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 2776 2871 . + 0 ID=cds.g10465.t1;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 3256 3594 . + . ID=g10465.t1.exon4;Parent=g10465.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 3256 3594 . + 0 ID=cds.g10465.t1;Parent=g10465.t1 #PROT g10465.t1 g10465 MGSGASKEASASDASAPAAKAKGETTANNAKKGAAVDASEPRKAVNNEEEPEESEDDDDDEDGEDDDDEESDEEDAPRPGKGKPVKSTVKRLPPMQPIAPIVAAISAQDALAKLRLTSLFRTCDGKRWTKIEKAAATRSFASGEDVLAKGDNGSGVYVIMEGAAEVTTAGHTTVFASLGPGDFFGELSAIFGIPCSATVRASSKLTCRVVPRDVLVKEGVGSKKESTDRQRMFGWCADRRYLDTSKLFEGGSLSAEIVRRMLVQTVLFADADPAAVAALSKSSNAIVYSPMSKMYDRVDFASEAYFLVRGTVRWTSDDGNKVFAEASSEASDPTRIHSSEFGVWGLLSSEISDSSVSIERISNVICVGYTHVFVLNCDTVRRTLEAYPKEMKRISVAAEMWRNAQEKRASREFVKYEGEVDVEPIRARLKRVGVVAW* # ORIGINAL: g10464.t1 original gene structure, not modified by PASA NODE_3316_length_3751_cov_42.7995 AUGUSTUS gene 87 623 . - . ID=g10464;Name=g10464.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS mRNA 87 623 . - . ID=g10464.t1;Parent=g10464;Name=g10464.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 447 623 . - . ID=g10464.t1.exon1;Parent=g10464.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 447 623 . - 0 ID=cds.g10464.t1;Parent=g10464.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS exon 87 207 . - . ID=g10464.t1.exon2;Parent=g10464.t1 NODE_3316_length_3751_cov_42.7995 AUGUSTUS CDS 87 207 . - 0 ID=cds.g10464.t1;Parent=g10464.t1 #PROT g10464.t1 g10464 MQHAAPAAGTGGGGPPRTERLPSVKDAVNYVCNALESYGIGGVVTQDTFRIAKGDGDAATLPLWHALQRLFVVEVTCGLHSCVPAEALAVLWSKEQVSD # ORIGINAL: g7360.t1 original gene structure, not modified by PASA NODE_1435_length_11300_cov_41.0917 AUGUSTUS gene 10342 10839 . - . ID=g7360;Name=g7360.t1 NODE_1435_length_11300_cov_41.0917 AUGUSTUS mRNA 10342 10839 . - . ID=g7360.t1;Parent=g7360;Name=g7360.t1 NODE_1435_length_11300_cov_41.0917 AUGUSTUS exon 10342 10839 . - . ID=g7360.t1.exon1;Parent=g7360.t1 NODE_1435_length_11300_cov_41.0917 AUGUSTUS CDS 10342 10839 . - 0 ID=cds.g7360.t1;Parent=g7360.t1 #PROT g7360.t1 g7360 MLVRLIPVFPFWFVNVGASVLGVTFPTFATATFVGILPGSFLYTEVGRNLGVLLEEHGDDHPGDLPFFLGNAIMSGSMNLPIGIMVGWVAVLLALRFTGVISDGKSDGIVTGGLTRESDETNANDALCATVDGQRVGNGHVVAAVAESPRKSRRLANGAKATNNR* # PASA_UPDATE: g7359.t1, single gene model update, valid-1, status:[pasa:asmbl_1577,status:3], valid-1 NODE_1435_length_11300_cov_41.0917 . gene 4994 10212 . + . ID=g7359;Name=g7359.t1 NODE_1435_length_11300_cov_41.0917 . mRNA 4994 10212 . + . ID=g7359.t1;Parent=g7359;Name=g7359.t1 NODE_1435_length_11300_cov_41.0917 . five_prime_UTR 4994 5448 . + . ID=g7359.t1.utr5p1;Parent=g7359.t1 NODE_1435_length_11300_cov_41.0917 . exon 4994 10212 . + . ID=g7359.t1.exon1;Parent=g7359.t1 NODE_1435_length_11300_cov_41.0917 . CDS 5449 9900 . + 0 ID=cds.g7359.t1;Parent=g7359.t1 NODE_1435_length_11300_cov_41.0917 . three_prime_UTR 9901 10212 . + . ID=g7359.t1.utr3p1;Parent=g7359.t1 #PROT g7359.t1 g7359 MGCHVSRAVEPSKRERVGVPDGAPSSSLTASASADVLLGLVNALRNGTSASRCVRIYLSVSSDETARSLLCSKFLPELRGYLYEKCGVDASFVTFEKIDPQSSSVARAIALRLREIEACDLFVGVCGASHEETVKALLQLEASSEHKDHVSGVSSHVNQLWRDFPNMRIVLSGGVFGVGAVERHFARTAAKDKPAMLFYERGISDRISSGKKRRSQLTQQQQPKAPLIADPAHLQHEDALEHEAAAAMEGGDEPDDLPVARLSYRRACANGRDCSDIDCQHCAKEIKKSLQNIAKATAATLPSEERALDGTRKNSAAFEYSGPGTCAEEICRMLRMAFALATPSAIVGDDTHAGVMDAGSRDNSLGEDHVGSLSSAEHRASLSSTGDRRGSLTSERRLSLTSHENRRGSTSSDRRGSINSTDRRGSISSTDRRGSVSSTTQRNTIHPELTGPLHVSGSSNVETATSSLTAPFPPPIVYADPHRAFMRVKAAAVPIGDSRMRSLLERIESEFADSPDGLGPVVACGSEGMGKTSLAACWLRREFPGSISADYVGAASWRRESLVVASPRLRSASLTSTHNSPRLQPIVEWQTFVFYHSAGCTPESLLASNMLTRLCRMLSLRLGVVFDDSAAESGLDRLLIRAGRLILTAHKQRLNVYIVIDDFDLLAADDINTTGLRVASKSGVVTSKTARSAGANTASSMANGAGSSMSDNHNSVTINMNAVAASNGGDDQLGELRSSSRTSIHSTSGTMPSFGSTNAMFPRFLPPEALSFARILLTTTPKGACEQWMRLTRGLRRVALGTLDASSRRSVARACAARLGLPPLNDAELRSITGQRYAECPLFIEALLYCRRKAPAACGVWPLPTVQSVPPFSRGESSASMFGSDSSLTPTAGESGGGSEGGPLVPKFAASAAPSLADIFDQCATSNMGGSSTPGGSQHRAMDHGKGNSSSSSSSGNLASYSGIASTLTSSHDAILCLASFAAMSTAVRANDLTTYLNVAACIASARRGISEDEAKRALGMSQEAWSTAMVAVGMHVIHGPGGRLMFSGRCLRAAALSAHDLKSMSSASSSSLVRTAVSGDIPPPVGVAAAAQHNMERRRSSLSGIPSTPLMTISVRQQLSAHLASIILHAATRSEAAEAARDLRWALAEPRPLPGGFEYVSDPSLLKALYQHSRHELLRICKAILPTEATAAAFFFNRVLAGPSARADEGAQQTAAWVLDYLGHSKLALHAYDAAIRVQEMRGYAAGGPDAVAALLSNINSLAMINEDLGEYERSAECYEKALRLLGWTVEKAYEAYGSQMSKKFENGGHAQPGAANTAIATNAGLTRVGSGVGASASNTSGLASRSANTVTPAPVPTTDLAASAHSDLALSSSMAGVRREWERVGATLSNLAAMYYILRRYPLARSTFESAYVLCEKHLGTAHALTDTARKWLFCQPWPAGNGMPLATSGSIGGQSMMSSVSAASHSGAAAEPSPLCFSLQ* # PASA_UPDATE: g7358.t1, single gene model update, valid-1, status:[pasa:asmbl_1578,status:12], valid-1 NODE_1435_length_11300_cov_41.0917 . gene 102 4241 . - . ID=g7358;Name=g7358.t1 NODE_1435_length_11300_cov_41.0917 . mRNA 102 4241 . - . ID=g7358.t1;Parent=g7358;Name=g7358.t1 NODE_1435_length_11300_cov_41.0917 . five_prime_UTR 4052 4241 . - . ID=g7358.t1.utr5p1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 3832 4241 . - . ID=g7358.t1.exon1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 3832 4051 . - 0 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 3437 3542 . - . ID=g7358.t1.exon2;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 3437 3542 . - 2 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 2982 3166 . - . ID=g7358.t1.exon3;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 2982 3166 . - 1 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 2283 2676 . - . ID=g7358.t1.exon4;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 2283 2676 . - 2 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 1796 2066 . - . ID=g7358.t1.exon5;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 1796 2066 . - 1 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 1414 1515 . - . ID=g7358.t1.exon6;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 1414 1515 . - 0 ID=cds.g7358.t1;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . exon 102 1163 . - . ID=g7358.t1.exon7;Parent=g7358.t1 NODE_1435_length_11300_cov_41.0917 . CDS 102 1163 . - 0 ID=cds.g7358.t1;Parent=g7358.t1;3_prime_partial=true #PROT g7358.t1 g7358 MSIPADFVPLYSYYVTKHSWRGKYKRIFTIGNTGVQTLDPKNWESTNYWPYGEEIGDINPGKNSNEFIVFIKKGKKKQEFSTDYRDQLLTDAQRFRHLFSNGKRGSCNKGNFSCLKLSWNEKRIHTILSPAPYGIEQLSPSGDRVIGFYDYRGIDALTPVSDVPGSLVINYGGCGRLHFFVIEKRDEFIRALSDCAGAFIGFHLGLSKKTLTVEEYRNNRFGKYSDDDSITSMCEFTVNKLTPRSHEPVPRIFCLSEVCLIERDPATYNIVCCRPLVEIYAVIRSQTDVQKFTIEYKNGAIRHYLSIDRDGLLATLLDSVRSSGNRDCCLKMVDTQRGLRAGPLQGSVPEEIEALCLKTIGGQVEANGGMTFEQAVHAFNTNVDYSGLHHAETGDGFFAENKEKLITTAIQALLTHGEQLAEMSTQAACEQFEAIRRLVASKAGFDAFTRMVGFREKLGRRVVQAFKKHEDAVAYAAVDAISALMSPMHDNYDLAIEQSNKSALLGSREFLQKLVDRLGHCATTGTGALVALGLLDFFTFAICAPYSETTDAEQFDQLLDVVAGLERRLFRLFNHPSMAIVKGAGMVMRAMIEEGVPALGLRMQELALSEAALLKHLITAMFTPSSDVRMLGHRELSRHLVGLWTAENKAAMDLFRRMLPAGMLAFLESKDPIPKEEKVKLKVRDNLKSAQGRRRKKGDFQKTMTHWRSRMGIRIKPEVTQKPVTLRRRRQHIKNALNWDMLYWRMKQEHSRTDLIWNHKTREELREAMEAEYRAFSIDK # PASA_UPDATE: g12903.t1, single gene model update, valid-1, status:[pasa:asmbl_6899,status:12], valid-1 NODE_4046_length_2284_cov_35.9 . gene 329 2219 . - . ID=g12903;Name=g12903.t1 NODE_4046_length_2284_cov_35.9 . mRNA 329 2219 . - . ID=g12903.t1;Parent=g12903;Name=g12903.t1 NODE_4046_length_2284_cov_35.9 . five_prime_UTR 2215 2219 . - . ID=g12903.t1.utr5p1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . exon 2059 2219 . - . ID=g12903.t1.exon1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . CDS 2059 2214 . - 0 ID=cds.g12903.t1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . exon 1746 1860 . - . ID=g12903.t1.exon2;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . CDS 1746 1860 . - 0 ID=cds.g12903.t1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . exon 1140 1372 . - . ID=g12903.t1.exon3;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . CDS 1140 1372 . - 2 ID=cds.g12903.t1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . exon 755 880 . - . ID=g12903.t1.exon4;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . CDS 755 880 . - 0 ID=cds.g12903.t1;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . exon 329 589 . - . ID=g12903.t1.exon5;Parent=g12903.t1 NODE_4046_length_2284_cov_35.9 . CDS 329 589 . - 0 ID=cds.g12903.t1;Parent=g12903.t1;3_prime_partial=true #PROT g12903.t1 g12903 MMLRPDSNDVDRGAGTLDALQGILRNYEPHFRKQANPIVFFRVLLLSAQFEWAVDYLAQFEQYRTEAVHFAVALAHYGLLRLPVDPHAETLSAFDGRAHLNYARLLISYTHGFMRTDPADALEYYNLLSEVKIAGGQSLFGPCVRDLVIETREYDAIIGSVAPDGLRRPGAIDRFIRDKRQLASIIEDIAVDCEDRGLFHDAIALYDLAESAERVLSLLNRQLGQVLALPSAPLSDREQLRQIAHKVEERLGAPTRTGTSAYSSRHLSPLVATFKSLLSVARFFDLYHAGKTEEALM # PASA_UPDATE: g12382.t1, single gene model update, valid-1, status:[pasa:asmbl_2384,status:12],[pasa:asmbl_2385,status:12],[pasa:asmbl_2387,status:12], valid-1 NODE_1701_length_9618_cov_37.6919 . gene 1673 8998 . + . ID=g12382;Name=g12382.t1 NODE_1701_length_9618_cov_37.6919 . mRNA 1673 8998 . + . ID=g12382.t1;Parent=g12382;Name=g12382.t1 NODE_1701_length_9618_cov_37.6919 . exon 1673 6196 . + . ID=g12382.t1.exon1;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . CDS 1673 6196 . + 0 ID=cds.g12382.t1;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . exon 6495 6779 . + . ID=g12382.t1.exon2;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . CDS 6495 6779 . + 0 ID=cds.g12382.t1;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . exon 7123 8105 . + . ID=g12382.t1.exon3;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . CDS 7123 8105 . + 0 ID=cds.g12382.t1;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . exon 8419 8698 . + . ID=g12382.t1.exon4;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . CDS 8419 8698 . + 1 ID=cds.g12382.t1;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . exon 8876 8998 . + . ID=g12382.t1.exon5;Parent=g12382.t1 NODE_1701_length_9618_cov_37.6919 . CDS 8876 8998 . + 0 ID=cds.g12382.t1;Parent=g12382.t1 #PROT g12382.t1 g12382 MAPAPAQPDISASVRLRITCTRNDSPSSFRICLTEGNPAIRALTDSVNISFAESANDVTDPKPGVVYLARNPLDGRWLRACVHSVSPSTTPASSSSSDYPVTFVDIGTDAAVPVDWFRELDVRFAAIPPASFSACLWGIASPQGTNAGWSRDASRWFSGAVDGKVVEAVVMGAMPSDASAQSSENPCSVLLYDYDGTCINSELVEVGLAVAECDLGKLAVKRQPIGGASALSSRAAISASSAMLSTYFAEGADDVVGGEAMGHVTTAAFPGEQMGGVIGHQYGVMEEDDVTGGIDDTLGESESAERHGAGHVSFLTSDAPIGDIMSTVSASLTGIAAAFKDSKVGLSVSGAQTGKGKATAGASSDAGKRKVTAAATTAKQQAEAAAQTVMSRGKTVSQPTSGAAATQQQQQVLNTATGKRATNVASTPLPQGSSTSAVSASASAQKTVPASTAASTTATSTPTTTTTGGLASTITPAVGSHHTQMHKPHPRGPKYAYYPPTMPRLDMRMKVRVTNVVSAGRFWGQTVDEKLIAALDREINEHIRHGGGRMLFRMPHRGEAVLGFYQEDKTWYRAMVESVLSPDRVRIRFIDYGNAAVVPPQWIRETRTEFTNLPRAAVEFTLAGVKPSGSRHWSDDASAWIAETISDRRLEVKCVSSDGESSCSCVLYESAGIVDEDDEYAAQEYSVNLNEAMVEMGFAESIATGPGTDTLVRRYDDEFGEGPTEEEELRMLEESKKKRDAVAVAAGTTPAGVASRNTTVQATSLATATSSGLPFTSSSSLSSARQQTSSSPDGEGYVYSNPTIGTELDVVVVDVVSVGQFFLRPATVENELQAVMAALTAAAESLPSLPYAAGDLRLYSGAPVAAKFTGEDTLFYRARIEGFPRPGEVRVTYVDYGNSHVVPVPWVRLIRDNPEFLALPVTTFEARLYAVKPKSADGSDWSDAANDWFEKFTLDKTLLARVCAESSVVKMMQRERKCALFEVELHDTFAECSIVVNDQLIAGGFGEPVPNATPFQRHNVPHVTVAADGGASVQSQVASSAPLSSVSTSAPSPHFESAATPQSSALAEKLLPLPDAHDKGLSADGTMDLGDTSGLLPSGILSPLLEPTGLGAGTGGSGSDAIRSPSPMPETSSPHLSAGVFTPLPAPATAVGGAMAASFQSPPDVPRAAVQRLSIGEQAESQSLFSFGTMFRRDQQQQQQQQQQQQQGFDSAHDATISPSSSQGSGMQPSSSAGGVSGHDGMPRRDSGSSYSMGPIVRQGSISRAVGSTAPLAPQSRGEEQESSPPVVTAQAPPPGKVAVTAPRRRVVTGSRQAAVGAMSSAQTGDAAPQQQQQQQQQQQQQQHVGAHNTTILLSQKSIPTSDADDERSFHRERETDEVVPHTRASLSSSPPRAVAPPLRAARTVDIRITAVETPARFWAQLVDPHVLRIEHIQAMLDAGYQANLLPVPSSLNPGDLLAVITPEGRACRARVEEIVPGNRLYVFLIDIGTTRIVPRVAARYLTPHLAAEPPQAGLCLMTDVQPIGASEWSTDAIHRFIELVDMRTVRAILQSRDGSAMRVSLVDIQTGVSVGHTLCAEGYAREASTTPPPESASSPPAHVAVKPSSNMLSADATQTHPDVTSTAHRDAHVTDAPLSRAHTHVEINASARSTRSTARDSPRASPRMDSAAHTAPVAHAVAHYAAAQVQSDAVVASGFVAADALHLGTPAVPMDTAGAILLPPDEEKAREVAEAEAAAALVAEAEAAAAENAAIAAATALAAEEKRKKDEERARREELAAKEKVAKEEAARVKAASEKAAREEAARIEAENAEKAWQEKMAAFMREKEELDRKEREAAEKERMDQEKAAAAATAKGKGKEDRKAKKEKERAEKEKKEKEKEKEMKAAAKAKGGDSDDDGEGEDGDEYAGWSDEYPGSEDGGNSENGSGSDFGSDSDGEAGGDSDGEDGEEGSEDEDGNKRGKGFRQITVCKFYLTDAGCTKDKCQFAHVKDICKDWLVSKSCSTPGCKLRHTNKISLPKKKSQRDKVLKEVLLDEPKKKSKKGPVCKLFQKGKCKKLNCPMAHVAD* # PASA_UPDATE: g1560.t1, single gene model update, valid-1, status:[pasa:asmbl_542,status:12], valid-1 NODE_1142_length_13609_cov_40.0902 . gene 314 4631 . - . ID=g1560;Name=g1560.t1 NODE_1142_length_13609_cov_40.0902 . mRNA 314 4631 . - . ID=g1560.t1;Parent=g1560;Name=g1560.t1 NODE_1142_length_13609_cov_40.0902 . five_prime_UTR 4566 4631 . - . ID=g1560.t1.utr5p1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 4406 4631 . - . ID=g1560.t1.exon1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 4406 4565 . - 0 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 3828 4087 . - . ID=g1560.t1.exon2;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 3828 4087 . - 2 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 3436 3579 . - . ID=g1560.t1.exon3;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 3436 3579 . - 0 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 3078 3168 . - . ID=g1560.t1.exon4;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 3078 3168 . - 0 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 2647 2824 . - . ID=g1560.t1.exon5;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 2647 2824 . - 2 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 2206 2319 . - . ID=g1560.t1.exon6;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 2206 2319 . - 1 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 1924 2013 . - . ID=g1560.t1.exon7;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 1924 2013 . - 1 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 1543 1711 . - . ID=g1560.t1.exon8;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 1543 1711 . - 1 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 1282 1298 . - . ID=g1560.t1.exon9;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 1282 1298 . - 0 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 951 1142 . - . ID=g1560.t1.exon10;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 951 1142 . - 1 ID=cds.g1560.t1;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . exon 314 662 . - . ID=g1560.t1.exon11;Parent=g1560.t1 NODE_1142_length_13609_cov_40.0902 . CDS 314 662 . - 1 ID=cds.g1560.t1;Parent=g1560.t1;3_prime_partial=true #PROT g1560.t1 g1560 MRRSVLSSPLAVAVVLAAVALSAIGVTADMEACAGAIAALRNDDGSWKSEAAVYIDASGKLPAGILEGSFSDFGDYDECGTLPKSEAHFCFVHGIGYVERGGNVKGALLQLGLCLPAECAAEDIPQLFQLLSGLLQANYNISFGTAGETTFVCPEYEEMTSGAAGVIAMISVFAFAVLLATVYDWYRLWCVDNLYERVPSINAMESQPLLTPIQEKTQGGSLPAPSSRALQALACFSLVQNFPRLVSTRVGSEKHLSALNGIRVLSMAWVILSHTHSWVISLGLKNPSELANLLKRWNIQFIANGFFSVDSFFYLSGFLVGYLALAELQKKGTLPLAKYYIHRFWRLTPTYMFALLVLFKLMPVMSDGPIWYNVADQHSCSEYWWTNLLYINNYYPKDLKSECMGWSWYLALDMQFYIITPIFLFALHRNPKLGVGLISFVIVGCLAATGAITYHWDVTPSPFAEGGGADGDAETLLYFNKIYVQPYARIFPYLVGILTAFFMRRAGAEHGTFAIRIKAPALIVGSLVAFGLMYAPLNAFYPYFHGHSFTMAGKIAYNMFARLSWSIGLAWVTWVCATGNAPVINKLL # PASA_UPDATE: g1562.t1, single gene model update, valid-1, status:[pasa:asmbl_540,status:12],[pasa:asmbl_541,status:12], valid-1 NODE_1142_length_13609_cov_40.0902 . gene 11119 13472 . + . ID=g1562;Name=g1562.t1 NODE_1142_length_13609_cov_40.0902 . mRNA 11119 13472 . + . ID=g1562.t1;Parent=g1562;Name=g1562.t1 NODE_1142_length_13609_cov_40.0902 . five_prime_UTR 11119 11372 . + . ID=g1562.t1.utr5p1;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . exon 11119 11410 . + . ID=g1562.t1.exon1;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . CDS 11373 11410 . + 0 ID=cds.g1562.t1;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . exon 11557 12819 . + . ID=g1562.t1.exon2;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . CDS 11557 12819 . + 1 ID=cds.g1562.t1;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . exon 12983 13472 . + . ID=g1562.t1.exon3;Parent=g1562.t1 NODE_1142_length_13609_cov_40.0902 . CDS 12983 13472 . + 1 ID=cds.g1562.t1;Parent=g1562.t1 #PROT g1562.t1 g1562 MSQDRDRSYGRRDSGRANDSRQQRGNSTPTSDVSFDPNARVTGSVERLRESFGFISCHLSNNLFFHFNAFDGDARSIRPGDAVEFSVALDPSNNRLCAQDVVLLPPGTEVRRSSSTTSSTAANGQQSPVNGGPAAEATYRGVVEREPKRSDDAFGSASGKIEYTEVGGDERRAYASFSAREVEGDSFPRRGDIVEFGVDRRGGGSGGRRATWVRFVERARDERQLGVVSSVKDSYGFVERCDGSGEVFFHFSECLDVNPDDGIPFVRPGDEAEFSVTRRGGKLMAGSIRVVPPGTIPVDVPKADADAAPRTGAVQQTPRSARGDWPAVGLIYASDESGSFTLPFVADGTAEYVASIVTLKPGDPVEFRMASHPSCPRIRRAVGVAKSSQSARSSADGGRGSSAGRETGVVATVRDGFGFIKCCDRDARVFFHFSELADSLHEPRPGDEFEFSVIADKSDRLNAVRITVLPRNSVSFYNVSTEVISGKVEKPCESSRGRRGPKSTPAADPQPGTIRFALPDTTSSTIEFYEKDADGSVRTIETGDEVQFSIAEDKRTKSKRAVNVAITKRVSDQVEQVGLRVLLTRSTYISQLTCAG* # ORIGINAL: g1561.t1 original gene structure, not modified by PASA NODE_1142_length_13609_cov_40.0902 AUGUSTUS gene 5855 10071 . - . ID=g1561;Name=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS mRNA 5855 10071 . - . ID=g1561.t1;Parent=g1561;Name=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS exon 9232 10071 . - . ID=g1561.t1.exon1;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS CDS 9232 10071 . - 0 ID=cds.g1561.t1;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS exon 8919 9029 . - . ID=g1561.t1.exon2;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS CDS 8919 9029 . - 0 ID=cds.g1561.t1;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS exon 6787 8673 . - . ID=g1561.t1.exon3;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS CDS 6787 8673 . - 0 ID=cds.g1561.t1;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS exon 5855 6451 . - . ID=g1561.t1.exon4;Parent=g1561.t1 NODE_1142_length_13609_cov_40.0902 AUGUSTUS CDS 5855 6451 . - 0 ID=cds.g1561.t1;Parent=g1561.t1 #PROT g1561.t1 g1561 MGRGGGGGGMGAGGAGPRDRKISIVPSASTGSSGAEMNLAKAGAFHNVPIPPQRELDELFAALLNEMALNQEKKEVMNSLSNERKWTLILQHRSLDEWNEIKARLGGSEDTPEKMAGFIHEAMTLDQMVSLRIELSQKPMSWIARFIGCSGLELMLHWMKRSLAYDVAHKSEGRTSTTSHERQIQHECVRGLRALMNNPTGLFEMMHFKDGIDILAMGLVSEDHRTRKLVCEVLAAICIVEDGHDLILRAMSNLAKERRELFRFSILVESIDKIESIEFQTACMTLINSIVNFPDDLALRIHLRNEFLRLHLDDILPRLRMTSSEDLRTQLHLFDEDYNNDLGLMYDRMREDVDHTNPRSIFDSIYRHVRDTDAWPYFLSCMQHLLHVPYSDIHMSGKYWQLIDAMVSEIVLMRRYNEDMDPHFHINYDLDVEKVIMSYVDRDKQVSAEEVAEDLKRQLEHQTRTFRDIEKNYQERISQLESAMQAGHVAVPLSNIYTSAAVSASRPVSMASTSASASARLVPGGIAPASGVASLDSATLDSYNQVVQAVSGAKLEDLLKRVEVPASAVLDDDVRRSYEEKIAALTQLVNAALSGSIQLPGAGAATGPQSPSSGGLPPPPPPPMPGSEGSGHIPPPPPPPGSDAGGGIPPPPPPPGMGGPPPPPPPPGMGGPPGAPPPPGAMPTGPQLKAKRKITPGTKMRQLQWTKVQPKQVTNTVWADVDDENVLAEIDITDFESAFAAASGPANVPGLASGDSGAFVLPGKPAKKEKTTLIADQKRSYKIDIMLARITLGFEEIREALLNLDESKLTEQMLKNFVEFVPTPEETAVLHEYHGPVSELARVDQFLLRLLTIPHLEQRLQCLYFKRRFAQRLDELVPQIDLVASACDELLASKKLKKMMEIVLALGNYMNGGTARGAAYGFKIESLQRLGDTKAGKRTMFHYVAQLTDSKFPEAATFASDIAHVAPAAKIVMSAVSTELKEIRDGLAQVGRAINEVHVEVSEDKFHAVIPPFYADAQNQFASVEQKFKRMDELIAKSASFWGEDAKNVTLDSFFGTFAAFVSAFERARKDNFEEIQKKVVAERRAAALAEQRTKGQARLTELGGTPDQGVIDGLMETLRTGAWREGRNTSQRWKTPADSVRAS* # PASA_UPDATE: g6240.t1, single gene model update, valid-1, status:[pasa:asmbl_5172,status:12], valid-1 NODE_2879_length_4856_cov_55.9295 . gene 4151 4751 . + . ID=g6240;Name=g6240.t1 NODE_2879_length_4856_cov_55.9295 . mRNA 4151 4751 . + . ID=g6240.t1;Parent=g6240;Name=g6240.t1 NODE_2879_length_4856_cov_55.9295 . five_prime_UTR 4151 4249 . + . ID=g6240.t1.utr5p1;Parent=g6240.t1 NODE_2879_length_4856_cov_55.9295 . exon 4151 4398 . + . ID=g6240.t1.exon1;Parent=g6240.t1 NODE_2879_length_4856_cov_55.9295 . CDS 4250 4398 . + 0 ID=cds.g6240.t1;Parent=g6240.t1 NODE_2879_length_4856_cov_55.9295 . exon 4625 4751 . + . ID=g6240.t1.exon2;Parent=g6240.t1 NODE_2879_length_4856_cov_55.9295 . CDS 4625 4751 . + 1 ID=cds.g6240.t1;Parent=g6240.t1;3_prime_partial=true #PROT g6240.t1 g6240 MSGWDLGGVYASDRIEPRDDNEKEVNRANAVDKFRNFLLAFRDGNFFIYRDQLRRRCNLGEFYIEVSMQDLSAFDEVLADRLKKLPAEYLPL # PASA_UPDATE: g6239.t1, single gene model update, valid-1, status:[pasa:asmbl_5171,status:12], valid-1 NODE_2879_length_4856_cov_55.9295 . gene 439 3004 . + . ID=g6239;Name=g6239.t1 NODE_2879_length_4856_cov_55.9295 . mRNA 439 3004 . + . ID=g6239.t1;Parent=g6239;Name=g6239.t1 NODE_2879_length_4856_cov_55.9295 . five_prime_UTR 439 439 . + . ID=g6239.t1.utr5p1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . exon 439 661 . + . ID=g6239.t1.exon1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 440 661 . + 0 ID=cds.g6239.t1;Parent=g6239.t1;5_prime_partial=true NODE_2879_length_4856_cov_55.9295 . exon 1074 1110 . + . ID=g6239.t1.exon2;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 1074 1110 . + 0 ID=cds.g6239.t1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . exon 1497 1627 . + . ID=g6239.t1.exon3;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 1497 1627 . + 2 ID=cds.g6239.t1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . exon 1864 1986 . + . ID=g6239.t1.exon4;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 1864 1986 . + 0 ID=cds.g6239.t1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . exon 2155 2321 . + . ID=g6239.t1.exon5;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 2155 2321 . + 0 ID=cds.g6239.t1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . exon 2785 3004 . + . ID=g6239.t1.exon6;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . CDS 2785 2959 . + 1 ID=cds.g6239.t1;Parent=g6239.t1 NODE_2879_length_4856_cov_55.9295 . three_prime_UTR 2960 3004 . + . ID=g6239.t1.utr3p1;Parent=g6239.t1 #PROT g6239.t1 g6239 HEAAGTVVEVGEGVSDISVGDRVVSLHWSSCGTCPACSRGETTQCAEAKKSFLGITADGGYSEYIITGANGVAKVPEGFTSKEASAVMCTYGTVWRAAVTRGRLKSGERVLVTGASGGVGSAMVQVAKAMNCHVTAVTSQESKADYIRGIGADSVIVAPDLSSFHKQVNPKVDFALEAVGEPTFEGCLRSLRPGGRLGLVGNVTVGTAHTKLGFLILNSLEIIGSDSCTRSELAEVFAFLSKHKIRPHVSQVYPLAAAEEAQDALARKTATGRVVLSIDDQHAW* # ORIGINAL: g2168.t1 original gene structure, not modified by PASA NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS gene 2307 3510 . + . ID=g2168;Name=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS mRNA 2307 3510 . + . ID=g2168.t1;Parent=g2168;Name=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS exon 2307 2537 . + . ID=g2168.t1.exon1;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS CDS 2307 2537 . + 0 ID=cds.g2168.t1;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS exon 2727 2807 . + . ID=g2168.t1.exon2;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS CDS 2727 2807 . + 0 ID=cds.g2168.t1;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS exon 3228 3308 . + . ID=g2168.t1.exon3;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS CDS 3228 3308 . + 0 ID=cds.g2168.t1;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS exon 3445 3510 . + . ID=g2168.t1.exon4;Parent=g2168.t1 NODE_2609_length_5689_cov_23.8881_potentialcontaminant AUGUSTUS CDS 3445 3510 . + 0 ID=cds.g2168.t1;Parent=g2168.t1 #PROT g2168.t1 g2168 MDAARARRRGRVLALQTITGPRALKTALRRRHAAATAHATRLRARARAQQDGQAPVATLAPQDGQGLIATLVPLGTGAGQAPVAALVRQDGRALVATLVPLGTGDGQGLIAALVPQDGQGLIATLVPLGTGWARNMQHGYGFVHVRHRMDGR* # PASA_UPDATE: g12394.t1, single gene model update, valid-1, status:[pasa:asmbl_7971,status:12], valid-1 NODE_5276_length_933_cov_45.0629 . gene 2 930 . + . ID=g12394;Name=g12394.t1 NODE_5276_length_933_cov_45.0629 . mRNA 2 930 . + . ID=g12394.t1;Parent=g12394;Name=g12394.t1 NODE_5276_length_933_cov_45.0629 . exon 2 65 . + . ID=g12394.t1.exon1;Parent=g12394.t1 NODE_5276_length_933_cov_45.0629 . CDS 2 65 . + 0 ID=cds.g12394.t1;Parent=g12394.t1;5_prime_partial=true NODE_5276_length_933_cov_45.0629 . exon 326 382 . + . ID=g12394.t1.exon2;Parent=g12394.t1 NODE_5276_length_933_cov_45.0629 . CDS 326 382 . + 2 ID=cds.g12394.t1;Parent=g12394.t1 NODE_5276_length_933_cov_45.0629 . exon 678 930 . + . ID=g12394.t1.exon3;Parent=g12394.t1 NODE_5276_length_933_cov_45.0629 . CDS 678 850 . + 2 ID=cds.g12394.t1;Parent=g12394.t1 NODE_5276_length_933_cov_45.0629 . three_prime_UTR 851 930 . + . ID=g12394.t1.utr3p1;Parent=g12394.t1 #PROT g12394.t1 g12394 PVPTLSRTVGSAVNASGNDSEVSAAIQYNTFQISGNVEIKDVSEMLPQILQQLGADDLKRLMAQMGGAAGVEAPAADADDDVPELVENFEEAAEKKA* # PASA_UPDATE: g4802.t1, single gene model update, valid-1, status:[pasa:asmbl_4592,status:12], valid-1 NODE_2583_length_5791_cov_39.7554 . gene 371 3981 . - . ID=g4802;Name=g4802.t1 NODE_2583_length_5791_cov_39.7554 . mRNA 371 3981 . - . ID=g4802.t1;Parent=g4802;Name=g4802.t1 NODE_2583_length_5791_cov_39.7554 . five_prime_UTR 3944 3981 . - . ID=g4802.t1.utr5p1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 3329 3981 . - . ID=g4802.t1.exon1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 3329 3943 . - 0 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 3009 3126 . - . ID=g4802.t1.exon2;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 3009 3126 . - 0 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 2644 2830 . - . ID=g4802.t1.exon3;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 2644 2830 . - 2 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 2300 2381 . - . ID=g4802.t1.exon4;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 2300 2381 . - 1 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 1891 1979 . - . ID=g4802.t1.exon5;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 1891 1979 . - 0 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 1446 1533 . - . ID=g4802.t1.exon6;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 1446 1533 . - 1 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 1055 1229 . - . ID=g4802.t1.exon7;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 1055 1229 . - 0 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 651 808 . - . ID=g4802.t1.exon8;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 651 808 . - 2 ID=cds.g4802.t1;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . exon 371 532 . - . ID=g4802.t1.exon9;Parent=g4802.t1 NODE_2583_length_5791_cov_39.7554 . CDS 371 532 . - 0 ID=cds.g4802.t1;Parent=g4802.t1 #PROT g4802.t1 g4802 MAASLASGRAVHSDAPLRWMRLCVSEARANRLPMCKESLARSAVARSQLSVSAARAISLPNLSLVPQSRLFSSFSSFSSLRSQSGAACTPFATQNSIARMRLSSVNATHAAPRVTILPCNRPSQYRFKHSDAGSTSAKDSTRTIPKDAATTVNPKVIGAVGGPPEAAKASDLSMLRKLMTYLWPKDQPTLKARVVVSLTLLVLGKVLNVQVPFLFKKIVDVVNTPEFTDAATNGLVVAGTILVGYGAARIGASLFSELRNAVFARVSQSAIRRLALNTFVHLHSLDHRFHMNRQTGALSRAIDRGTRGITFILSSLLFNIVPTALEVTMVCGILAFNFGPSFAVVTGGCIAAYTAFTLGITEWRSKFRTQMNQADSDAGSKAVDSLINYETVKFFRNEAFEAQRYDKVLAKYETASLKTTSSLALLNWGQGAIFSLALTAIMAMSVQGIQNGTMTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQSLQDMGTLFNLLTLKPAVQDAPGAPPLTLSGGHVTFDSVVFGYTDRAVTLKGVTFDIPAGKKVAIVGGSGSG* # PASA_UPDATE: g4803.t1, single gene model update, valid-1, status:[pasa:asmbl_4593,status:12], valid-1 NODE_2583_length_5791_cov_39.7554 . gene 4308 5329 . - . ID=g4803;Name=g4803.t1 NODE_2583_length_5791_cov_39.7554 . mRNA 4308 5329 . - . ID=g4803.t1;Parent=g4803;Name=g4803.t1 NODE_2583_length_5791_cov_39.7554 . five_prime_UTR 5329 5329 . - . ID=g4803.t1.utr5p1;Parent=g4803.t1 NODE_2583_length_5791_cov_39.7554 . exon 5268 5329 . - . ID=g4803.t1.exon1;Parent=g4803.t1 NODE_2583_length_5791_cov_39.7554 . CDS 5268 5328 . - 0 ID=cds.g4803.t1;Parent=g4803.t1 NODE_2583_length_5791_cov_39.7554 . exon 4308 4710 . - . ID=g4803.t1.exon2;Parent=g4803.t1 NODE_2583_length_5791_cov_39.7554 . CDS 4391 4710 . - 2 ID=cds.g4803.t1;Parent=g4803.t1 NODE_2583_length_5791_cov_39.7554 . three_prime_UTR 4308 4390 . - . ID=g4803.t1.utr3p1;Parent=g4803.t1 #PROT g4803.t1 g4803 MSPERLRGDLATFSGDVYSFGIVMYELMIRETPYLRDFQSGIEINGLVVLIALNDFRPVIPSDIDVDPAYIALLRRCWAAFPEDRPDFAELVDTLSDMHAKVVVENAANRHDDATDMHVDLEEFKD* # PASA_UPDATE: g467.t1, single gene model update, valid-1, status:[pasa:asmbl_4916,status:12], valid-1 NODE_2742_length_5260_cov_39.8405 . gene 153 797 . + . ID=g467;Name=g467.t1 NODE_2742_length_5260_cov_39.8405 . mRNA 153 797 . + . ID=g467.t1;Parent=g467;Name=g467.t1 NODE_2742_length_5260_cov_39.8405 . exon 153 797 . + . ID=g467.t1.exon1;Parent=g467.t1 NODE_2742_length_5260_cov_39.8405 . CDS 153 446 . + 0 ID=cds.g467.t1;Parent=g467.t1;5_prime_partial=true NODE_2742_length_5260_cov_39.8405 . three_prime_UTR 447 797 . + . ID=g467.t1.utr3p1;Parent=g467.t1 #PROT g467.t1 g467 LLPSRHLTSATASTTAVPQSDVVMLAQTKLPFPLPSQSTLKPSRTTLQPSAIVTQRTRSAHRSMNFPPLCVSWRTALSSGPRWRNASPSLCRRMSEL* # PASA_UPDATE: g470.t1, single gene model update, valid-1, status:[pasa:asmbl_4917,status:12], valid-1 NODE_2742_length_5260_cov_39.8405 . gene 4364 5141 . + . ID=g470;Name=g470.t1 NODE_2742_length_5260_cov_39.8405 . mRNA 4364 5141 . + . ID=g470.t1;Parent=g470;Name=g470.t1 NODE_2742_length_5260_cov_39.8405 . five_prime_UTR 4364 4718 . + . ID=g470.t1.utr5p1;Parent=g470.t1 NODE_2742_length_5260_cov_39.8405 . exon 4364 5036 . + . ID=g470.t1.exon1;Parent=g470.t1 NODE_2742_length_5260_cov_39.8405 . CDS 4719 5036 . + 0 ID=cds.g470.t1;Parent=g470.t1 NODE_2742_length_5260_cov_39.8405 . exon 5136 5141 . + . ID=g470.t1.exon2;Parent=g470.t1 NODE_2742_length_5260_cov_39.8405 . CDS 5136 5141 . + 0 ID=cds.g470.t1;Parent=g470.t1 #PROT g470.t1 g470 MSFSAKSIGQAEQKKRFTKAASSRFPKNVVDDHVGEMLDAMYALVLKHTNNDTKEAKELTEDAAKMIVKIAALHLTDALSAGESKDLSTLRSKLRSAMLTMASFHEE* # ORIGINAL: g468.t1 original gene structure, not modified by PASA NODE_2742_length_5260_cov_39.8405 AUGUSTUS gene 1195 2463 . - . ID=g468;Name=g468.t1 NODE_2742_length_5260_cov_39.8405 AUGUSTUS mRNA 1195 2463 . - . ID=g468.t1;Parent=g468;Name=g468.t1 NODE_2742_length_5260_cov_39.8405 AUGUSTUS exon 1195 2463 . - . ID=g468.t1.exon1;Parent=g468.t1 NODE_2742_length_5260_cov_39.8405 AUGUSTUS CDS 1195 2463 . - 0 ID=cds.g468.t1;Parent=g468.t1 #PROT g468.t1 g468 MSLSQPRVTFVSLPVEVVERHLVPFLSNKDRASLAGVNSRLRLVMKRVRLYTLRSTFAMRYFECEAFRNAVWAEIPRERLVSSLSGITDASMLGGVHSLDISWSDVTDVSALGDIHSLNVSHCYNLVDVSALGGVYSLDISYCKAVTDVSALGGVYSLSMNGLFRVTDVTALGGVHLLSLYGCEGLKDVSALGGVHSLNLAYCNGVTDVSALGGVHSLNLSFCQEVVDVSALGGVHTLNLSYCTGVRDVHALGGVYSLNLSFCKEVTDVSALGGIHSLVLSYCEGVTDVSALGGVHSLCLQGCSKVTDLSALGGLYSLDLSKCEGVTDVSALGGVHSLNLHDCKGVTDVSALGGVHTLNLSLCHNVTDLSSLGRVHSLFLYGCQGVTDISALGGVHTLDITHCDGVTDLSVLGRLVRDPVTY* # PASA_UPDATE: g469.t1, single gene model update, valid-1, status:[pasa:asmbl_4918,status:12], valid-1 NODE_2742_length_5260_cov_39.8405 . gene 3160 3862 . - . ID=g469;Name=g469.t1 NODE_2742_length_5260_cov_39.8405 . mRNA 3160 3862 . - . ID=g469.t1;Parent=g469;Name=g469.t1 NODE_2742_length_5260_cov_39.8405 . five_prime_UTR 3843 3862 . - . ID=g469.t1.utr5p1;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . exon 3747 3862 . - . ID=g469.t1.exon1;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . CDS 3747 3842 . - 0 ID=cds.g469.t1;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . exon 3485 3586 . - . ID=g469.t1.exon2;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . CDS 3485 3586 . - 0 ID=cds.g469.t1;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . exon 3160 3243 . - . ID=g469.t1.exon3;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . CDS 3223 3243 . - 0 ID=cds.g469.t1;Parent=g469.t1 NODE_2742_length_5260_cov_39.8405 . three_prime_UTR 3160 3222 . - . ID=g469.t1.utr3p1;Parent=g469.t1 #PROT g469.t1 g469 MHPTRVIASTEASLSGRYVRRIETAVAACRAEGVAYGVCVNAKLADIGKDSCAIEFEALRRCVALAMAGTKK* # ORIGINAL: g13386.t1 original gene structure, not modified by PASA NODE_3461_length_3415_cov_41.6207 AUGUSTUS gene 77 3195 . + . ID=g13386;Name=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS mRNA 77 3195 . + . ID=g13386.t1;Parent=g13386;Name=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 77 222 . + . ID=g13386.t1.exon1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 77 222 . + 2 ID=cds.g13386.t1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 527 1705 . + . ID=g13386.t1.exon2;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 527 1705 . + 0 ID=cds.g13386.t1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 1974 2147 . + . ID=g13386.t1.exon3;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 1974 2147 . + 0 ID=cds.g13386.t1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 2315 2544 . + . ID=g13386.t1.exon4;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 2315 2544 . + 0 ID=cds.g13386.t1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 2867 2999 . + . ID=g13386.t1.exon5;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 2867 2999 . + 1 ID=cds.g13386.t1;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS exon 3193 3195 . + . ID=g13386.t1.exon6;Parent=g13386.t1 NODE_3461_length_3415_cov_41.6207 AUGUSTUS CDS 3193 3195 . + 0 ID=cds.g13386.t1;Parent=g13386.t1 #PROT g13386.t1 g13386 PVLIDTNMRVTKISWNNNGSILAVAGSTYGTTADRQTHMIQFYTPYGEHLRSLKCPGKGISSIAWEGGGLRIVAAVDSYIYFANIRPDYRWGYFASTLVYSFSKPERAEQCVVFWDAVTKERYVKYVKNLVGIAAAGENCIMSTRNDEGNHLLILCNALGTPVDSRSIEMDAVFLAMTKTHVFVASRVAVYVWQYAKPHKHAVSGSSAAAAAAAAAAAALGNRKSDGKERLFHIDDQPGSSGVEPHGGDYRKAHLATRDAICSITASEKWLIIARESGTLQKYSLPGCTLEAHQAIGCRPHVMSLNCDGSRLAIVDISGVLGFWETDNGRSLLTLDDEGGEKPAEAFRHMKFERKDVWDIRWADDNPELLAAMEKTRMYVFRGTDPEDTVVASGYICHFEDLQIQTVLLDELMRTPDSPQKEHLVNYETKSLRDSRDLLEKVDIKDAYQFIEDNPHPRLWRLLAESALGLLDFDMADKAFVRCQDYQGIQLVKRLRRLDSKMKQKAEVHAYFKRFEDAERIYLEIDRRDLAIQLRIKLGDWFKVVQLLKTGGGGDDALMEQAWNAIGDYYADRLKWNNAVTYYVQGRNQARLAECYYMLEDYAGLEKMMHSLPENHALLA* # PASA_UPDATE: g8691.t1, single gene model update, valid-1, status:[pasa:asmbl_1641,status:3], valid-1 NODE_1451_length_11204_cov_42.3184 . gene 3279 4729 . - . ID=g8691;Name=g8691.t1 NODE_1451_length_11204_cov_42.3184 . mRNA 3279 4729 . - . ID=g8691.t1;Parent=g8691;Name=g8691.t1 NODE_1451_length_11204_cov_42.3184 . five_prime_UTR 4711 4729 . - . ID=g8691.t1.utr5p1;Parent=g8691.t1 NODE_1451_length_11204_cov_42.3184 . exon 4327 4729 . - . ID=g8691.t1.exon1;Parent=g8691.t1 NODE_1451_length_11204_cov_42.3184 . CDS 4327 4710 . - 0 ID=cds.g8691.t1;Parent=g8691.t1 NODE_1451_length_11204_cov_42.3184 . exon 3279 4185 . - . ID=g8691.t1.exon2;Parent=g8691.t1 NODE_1451_length_11204_cov_42.3184 . CDS 3292 4185 . - 0 ID=cds.g8691.t1;Parent=g8691.t1 NODE_1451_length_11204_cov_42.3184 . three_prime_UTR 3279 3291 . - . ID=g8691.t1.utr3p1;Parent=g8691.t1 #PROT g8691.t1 g8691 MQMAHLACTNAARLVRFAASEFRGRVPPFSPWVSWSPQICTLGNRTPLSLGGSHSEHARIAYVVCHNASAATTRRPMSVFARQPSPRRWGMTLALAGGVIAFGSAAIAFYLRRDGLSLSARLMVYKGQFYENKNEFAEAELLYRSAISQTDADPARSKAPGLLYTTLRLANLLCRPEVNKSHDAEHFFRRSMHTLHGLGDDEAMIEISVKLGSIYESVGRRDLALSGFEWAVAKARELVSGQRSSPSAKKMSTAAVENARALLCVALERLAEFRVSGGDGAAAVPLLLEAYGLALGIHGTKSRQAGAMLTSACAAAYLAGEYGMAEEYGRRAYEIASIRASSGDVSLIPSTCYNYGRTLMRLERAPEGHALVRNAVEVATKLGDMEALREIQRGLRGENEPGVDLRAVESTVVAAIAASAEGSVA* # PASA_UPDATE: g8692.t1, single gene model update, valid-1, status:[pasa:asmbl_1642,status:3], valid-1 NODE_1451_length_11204_cov_42.3184 . gene 4989 7450 . + . ID=g8692;Name=g8692.t1 NODE_1451_length_11204_cov_42.3184 . mRNA 4989 7450 . + . ID=g8692.t1;Parent=g8692;Name=g8692.t1 NODE_1451_length_11204_cov_42.3184 . five_prime_UTR 4989 5225 . + . ID=g8692.t1.utr5p1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . exon 4989 5339 . + . ID=g8692.t1.exon1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . CDS 5226 5339 . + 0 ID=cds.g8692.t1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . exon 5479 5790 . + . ID=g8692.t1.exon2;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . CDS 5479 5790 . + 0 ID=cds.g8692.t1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . exon 6127 7061 . + . ID=g8692.t1.exon3;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . CDS 6127 7061 . + 0 ID=cds.g8692.t1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . exon 7209 7450 . + . ID=g8692.t1.exon4;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . CDS 7209 7404 . + 1 ID=cds.g8692.t1;Parent=g8692.t1 NODE_1451_length_11204_cov_42.3184 . three_prime_UTR 7405 7450 . + . ID=g8692.t1.utr3p1;Parent=g8692.t1 #PROT g8692.t1 g8692 MASSDDDNQQADELMVLESIFGDGPFSSVEEDGRKGGKISVVFENGQLPERVTVRMNVVEASAKPTPGEPISTPTKVTATADAGAELKLDDVHSVTEPKKRVVERILQYVPPIVLHFYFPENYPSARAPEYTLTCSWLTPTQLSRLCAHLDGMWTPGSVVVFEWVQWIQETAVAFLGITSPIQLRVPRKNAGVCLDTEQSGTPRSNVCPDARAVQDAATVTALLQQMVEYDRRRTEELLSKGEFTCEVCYADKPGAQCFQFAECRHIYCRECVSMFFTTQINDGLVTRLRCPSTGCTSIAAPHDVKSLVTPDLYQKYDRLLLQQTLNEMGCVYTCPRKACQSVVLCEKEQSMAVCGSCGHAFCNLCDHAWHGVSPCLGALTGVLELYAKAGREERARLEKRYGAKRLREALEDRETRTWMTENSKPCPSCRTAIEKNDGCNKMECTKCHAYFCWLCMRLVNKSKPYEHYAVGKCSGRLFEGVDVDNFEEFDEWDEDDGEAWHDDGGDEGAELDVLLFD* # ORIGINAL: g8690.t1 original gene structure, not modified by PASA NODE_1451_length_11204_cov_42.3184 AUGUSTUS gene 1782 2445 . + . ID=g8690;Name=g8690.t1 NODE_1451_length_11204_cov_42.3184 AUGUSTUS mRNA 1782 2445 . + . ID=g8690.t1;Parent=g8690;Name=g8690.t1 NODE_1451_length_11204_cov_42.3184 AUGUSTUS exon 1782 1979 . + . ID=g8690.t1.exon1;Parent=g8690.t1 NODE_1451_length_11204_cov_42.3184 AUGUSTUS CDS 1782 1979 . + 0 ID=cds.g8690.t1;Parent=g8690.t1 NODE_1451_length_11204_cov_42.3184 AUGUSTUS exon 2182 2445 . + . ID=g8690.t1.exon2;Parent=g8690.t1 NODE_1451_length_11204_cov_42.3184 AUGUSTUS CDS 2182 2445 . + 0 ID=cds.g8690.t1;Parent=g8690.t1 #PROT g8690.t1 g8690 MGKSIRSKVKRKFRAIKREKNDVLERKRLAKIVLELPINAERKEREKSPEYFENPDGSKRTFSYWEVINDMNAEKEAAAIAKGEPLPPVRVFKPRANQAEYEKDGDEMDAEAAEGDAKMAEEEPFPTRSQQKKLKAKHRLKRKGVANKKRFNL* # PASA_UPDATE: g8693.t1, single gene model update, valid-1, status:[pasa:asmbl_1643,status:12], valid-1 NODE_1451_length_11204_cov_42.3184 . gene 7843 11204 . + . ID=g8693;Name=g8693.t1 NODE_1451_length_11204_cov_42.3184 . mRNA 7843 11204 . + . ID=g8693.t1;Parent=g8693;Name=g8693.t1 NODE_1451_length_11204_cov_42.3184 . five_prime_UTR 7843 8035 . + . ID=g8693.t1.utr5p1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 7843 8092 . + . ID=g8693.t1.exon1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 8036 8092 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 8358 8432 . + . ID=g8693.t1.exon2;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 8358 8432 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 8700 8817 . + . ID=g8693.t1.exon3;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 8700 8817 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 9192 9256 . + . ID=g8693.t1.exon4;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 9192 9256 . + 2 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 9575 9685 . + . ID=g8693.t1.exon5;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 9575 9685 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 9928 10015 . + . ID=g8693.t1.exon6;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 9928 10015 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 10258 10412 . + . ID=g8693.t1.exon7;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 10258 10412 . + 2 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 10727 10819 . + . ID=g8693.t1.exon8;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 10727 10819 . + 0 ID=cds.g8693.t1;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . exon 11011 11204 . + . ID=g8693.t1.exon9;Parent=g8693.t1 NODE_1451_length_11204_cov_42.3184 . CDS 11011 11204 . + 0 ID=cds.g8693.t1;Parent=g8693.t1;3_prime_partial=true #PROT g8693.t1 g8693 MHFAIPDTEERGAEPNKYTVYNLHVNGVFHCSTRYSELSEFNEKIRTAFPTVALPKFPPKRMFSLNKEQLEERRSQLEDFFQRVGDIAQIVSSEILKQFLVDAQRNSEEMPTEDCDLSVFLCDDTEVKVTAKTTDRTEYVMKLFSEKIGLSLGNEVNFGLFISDSPDEGGAVVRIVQPFESTYRTMRRAKAGSRLVVRRSSWNPQIELAMYSDDVAVNILYAQAIRDFNNGWLVPSSDLLEKLKALRKQGKKKEFLMLARELKDYGYFKLEPCMSDFPNKDSPVVVSVGPQDIRLRLQDEVRAWSDSAIIMLKIARGG # PASA_UPDATE: g8689.t1, single gene model update, valid-1, status:[pasa:asmbl_1640,status:12], valid-1 NODE_1451_length_11204_cov_42.3184 . gene 263 1276 . - . ID=g8689;Name=g8689.t1 NODE_1451_length_11204_cov_42.3184 . mRNA 263 1276 . - . ID=g8689.t1;Parent=g8689;Name=g8689.t1 NODE_1451_length_11204_cov_42.3184 . five_prime_UTR 1041 1276 . - . ID=g8689.t1.utr5p1;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . exon 987 1276 . - . ID=g8689.t1.exon1;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . CDS 987 1040 . - 0 ID=cds.g8689.t1;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . exon 527 647 . - . ID=g8689.t1.exon2;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . CDS 527 647 . - 0 ID=cds.g8689.t1;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . exon 263 348 . - . ID=g8689.t1.exon3;Parent=g8689.t1 NODE_1451_length_11204_cov_42.3184 . CDS 263 348 . - 2 ID=cds.g8689.t1;Parent=g8689.t1 #PROT g8689.t1 g8689 MASDSLAYTQVFNPVLQKIAEADRNAVSAAETLRSALLKAEQTRPGWTLEFLTSLLDAENAPAAVKQNLTKLKKGMRNTLDTLACV* # PASA_UPDATE: g6017.t1, single gene model update, valid-1, status:[pasa:asmbl_8456,status:12], valid-1 NODE_607_length_20295_cov_40.5286 . gene 8366 11128 . + . ID=g6017;Name=g6017.t1 NODE_607_length_20295_cov_40.5286 . mRNA 8366 11128 . + . ID=g6017.t1;Parent=g6017;Name=g6017.t1 NODE_607_length_20295_cov_40.5286 . exon 8366 8917 . + . ID=g6017.t1.exon1;Parent=g6017.t1 NODE_607_length_20295_cov_40.5286 . CDS 8366 8917 . + 0 ID=cds.g6017.t1;Parent=g6017.t1 NODE_607_length_20295_cov_40.5286 . exon 9084 11128 . + . ID=g6017.t1.exon2;Parent=g6017.t1 NODE_607_length_20295_cov_40.5286 . CDS 9084 10649 . + 0 ID=cds.g6017.t1;Parent=g6017.t1 NODE_607_length_20295_cov_40.5286 . three_prime_UTR 10650 11128 . + . ID=g6017.t1.utr3p1;Parent=g6017.t1 #PROT g6017.t1 g6017 MHSGSELNSASPESDSQRVRQLFDSVSAGAVASDYIVRTSESETMPPNPHTPHPLAPSTPAALPVLATPEPFSSGGEAAGAKHSRRVHGREERLMSVRTPPRQKRKRAHSSADLEGDHQSAVAGALLNRDGDYGRWKQQRSETHSVASSAGEHERNSGCKSSPDVTDSAESRRSLMLSACNYCRSAHRRCSGGTPCSRCMKLDKTDCSYVPQGKRGRKSAPLNAALSAALSPQSTDAPSSVVSANDGDSQESTVNADGYPLRRRRRAHSERSSSAHSGRHVSRQSRWASHEATGAAVNGRSDHVTRDQGSLDSVPQVRPRGKQTAFGSHETPDVAAAHMIADMSRRYQSSDHSHADKYGDRNGDQGPLPPPPPLSSGGGVCGSSFHARHHQQLKHHAHAGHGSAMRAATGQGVAMHHVPSLPASPYASAPGPFGGFGGAPSFPVYAYPQYTPALMMHAPMGVVTPATHQQLSPSAHPQHSQHSQQQHHHQQEQQQPTQWKHKTAYAQNPSTGGDDLHPLGHPPELLHYGYPPYANQPPWLPGYIAIPVGQYYGQPHPAHHLPAPVGLYYYGSSSANVAAKPLSLEQHTLSAAHAASAEKQESEAPPETPDNAASVVAVEVLRSSLLSSANSAGGVGKDTSTRETAVLLQQGLPVAQILPVVQATQSGELSVSSASGDRDVATGNAQAELAGTTALESDGRSTPLS* # ORIGINAL: g6016.t1 original gene structure, not modified by PASA NODE_607_length_20295_cov_40.5286 AUGUSTUS gene 3223 6921 . + . ID=g6016;Name=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS mRNA 3223 6921 . + . ID=g6016.t1;Parent=g6016;Name=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 3223 3763 . + . ID=g6016.t1.exon1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 3223 3763 . + 0 ID=cds.g6016.t1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 4146 4258 . + . ID=g6016.t1.exon2;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 4146 4258 . + 2 ID=cds.g6016.t1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 4413 4564 . + . ID=g6016.t1.exon3;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 4413 4564 . + 0 ID=cds.g6016.t1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 5209 5492 . + . ID=g6016.t1.exon4;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 5209 5492 . + 1 ID=cds.g6016.t1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 5987 6405 . + . ID=g6016.t1.exon5;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 5987 6405 . + 2 ID=cds.g6016.t1;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 6772 6921 . + . ID=g6016.t1.exon6;Parent=g6016.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 6772 6921 . + 0 ID=cds.g6016.t1;Parent=g6016.t1 #PROT g6016.t1 g6016 MSATLPTVAHSRGFARLCFGRIKSAAHPAPAYSLSPTSGATNGSTFAVGQLCPAGLSHRSLATSTGKGADTDVNLTKSERVISGDITTAIAEKVAKEATRVVPPVIVGGQSPVSPAVTAGGAHAQSVPDEAATGRQRLVILGTGWGGYSLLTKVDKTKYDVIVVSPRNHFLFTPLLASTTVGTLEFRSIQENIRRANHFRNEKHFHLAFARAVDFDRKVVKCESSIDPGHWHEVPYDKLVIGVGAVPNTFNIPGVMENAFFLKELSDARAIRTKLLGNMEMAVQPGYSAEEIARRLSVVVVGGGPTGIEFAAELHDFVVQDVRRLLPAVQHGIRVSLVEAQQILPSFDESLRRFAEQKIAKREGMRLVRGQVVKVTATDVHLNDGTSIPASLVVWSTGVGPREFTQQLDVPKSRGRRILTDECLRVKGVPSGDVYALGDCAEIEGHPLPATAQVAEREGRYLAAVLGRAAAEAETGSVSSPKPFVYKPLGMLAYIGDYKALAEVGTHRLSGIVSWLVWRSAYTTRLGSWRLRMQVPFDWMKTFFFGRDISRF* # PASA_UPDATE: g6015.t1, single gene model update, valid-1, status:[pasa:asmbl_8455,status:12],[pasa:asmbl_8458,status:12], valid-1 NODE_607_length_20295_cov_40.5286 . gene 856 2132 . - . ID=g6015;Name=g6015.t1 NODE_607_length_20295_cov_40.5286 . mRNA 856 2132 . - . ID=g6015.t1;Parent=g6015;Name=g6015.t1 NODE_607_length_20295_cov_40.5286 . exon 1829 2132 . - . ID=g6015.t1.exon1;Parent=g6015.t1 NODE_607_length_20295_cov_40.5286 . CDS 1829 2132 . - 0 ID=cds.g6015.t1;Parent=g6015.t1 NODE_607_length_20295_cov_40.5286 . exon 1421 1598 . - . ID=g6015.t1.exon2;Parent=g6015.t1 NODE_607_length_20295_cov_40.5286 . CDS 1421 1598 . - 2 ID=cds.g6015.t1;Parent=g6015.t1 NODE_607_length_20295_cov_40.5286 . exon 856 1249 . - . ID=g6015.t1.exon3;Parent=g6015.t1 NODE_607_length_20295_cov_40.5286 . CDS 856 1249 . - 1 ID=cds.g6015.t1;Parent=g6015.t1 #PROT g6015.t1 g6015 MEAARESSVVWVLLCAVLILAAGFLGHVSAAFASSSPTIRKKHLRTESVRVGGLYNDAGQRNGASMLSAPSEVDVQAPHRPTKDLESNSYRFTSLSSERDHNVPTAVLTSSTLKELDYVNSIQHACSEDTITHSAWHSTRMATNNDDAVCVRRCEWERVPQCQQRPKPQSSRSLIAPDAHAWGDTHACAGDAACARRRSTALAVVDHAPRNLGTMRVAEMTSQMGVKESKQGGIVSHSQSHQRRKPRLCVCGSSPCMCDTITARLRDQMIVRAREMHTSGSRANTLPQIGY* # PASA_UPDATE: g6018.t1, single gene model update, valid-1, status:[pasa:asmbl_8459,status:12],[pasa:asmbl_8460,status:12], valid-1 NODE_607_length_20295_cov_40.5286 . gene 12656 18771 . - . ID=g6018;Name=g6018.t1 NODE_607_length_20295_cov_40.5286 . mRNA 12656 18771 . - . ID=g6018.t1;Parent=g6018;Name=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 18611 18771 . - . ID=g6018.t1.exon1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 18611 18771 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 17205 18369 . - . ID=g6018.t1.exon2;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 17205 18369 . - 1 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 16734 16862 . - . ID=g6018.t1.exon3;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 16734 16862 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 16302 16454 . - . ID=g6018.t1.exon4;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 16302 16454 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 15888 15975 . - . ID=g6018.t1.exon5;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 15888 15975 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 15560 15696 . - . ID=g6018.t1.exon6;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 15560 15696 . - 2 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 15205 15301 . - . ID=g6018.t1.exon7;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 15205 15301 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 14742 14843 . - . ID=g6018.t1.exon8;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 14742 14843 . - 2 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 14242 14343 . - . ID=g6018.t1.exon9;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 14242 14343 . - 2 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 13746 13843 . - . ID=g6018.t1.exon10;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 13746 13843 . - 2 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 13391 13482 . - . ID=g6018.t1.exon11;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 13391 13482 . - 0 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . exon 12656 12848 . - . ID=g6018.t1.exon12;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . CDS 12791 12848 . - 1 ID=cds.g6018.t1;Parent=g6018.t1 NODE_607_length_20295_cov_40.5286 . three_prime_UTR 12656 12790 . - . ID=g6018.t1.utr3p1;Parent=g6018.t1 #PROT g6018.t1 g6018 MSHPINSLFLTFRQIVELTRSLAEWKHKFCIVVNALDAHTVEAKRKSIDAEKDRAELEALRSRVSACDRTADTLQRSVASLEERLKATVLEKDALSTHLSTEKKEHAHARDLLVAAEANSTRLAAEVASLRGQSAQNAPSLNETASLASQVRSLEADLAGSRAELVAAKKHVDSETARFKADALRMEGELKEARRAMDVEKAESAKARGDVLRMEGELKEVRRKLDVDTAEGSRVRAELDRLARSITDANAKAASLEADLSKARLLVDAEKKKVADVESRHATELQRAKAEMDALAAELSRTKASRDAEATKAKGDSDVELVRVRGECAVAKAEAAQIRGELSKARDELQKSRDELQKVTARVSQQQQKGEDGEGATGLRLRKQLADALSQCEASKRVALEAEERAKFLQAESGRLSKEVADVRKELMDAKASGAALPSAVPAPHVTAGNNASDSRVLKLTAELEDARNKYAAQSQKLAQLEKMRDVFERQAAKRATIMSMRQSVMAGKGIDAIGSGDLKALHDIGKMDPAQRRTLIVQAKRQSMAMGGNRQSRIGQDGLVGKMEVILHEVDNLTKDIKEGEAALIEMERINMELERDAEMKGRLTSESGKYFKQLSVATDNLVKKLETMTKTFQQWMDGSIKTDSFSNSFKNDLSMLVKNFQVIGGDIKRHLQLYEAANAIPAPPSGGAVPPPPPTGAPALTIAARANSTGGSAAGQRGAGQLLDEIRSGASLKKVTSEDIKKMKEKRVKTVRQSVAILGDLQSTLKMAIANHRLDMLENDDDDWDSMDWTD* # ORIGINAL: g6019.t1 original gene structure, not modified by PASA NODE_607_length_20295_cov_40.5286 AUGUSTUS gene 19545 20171 . - . ID=g6019;Name=g6019.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS mRNA 19545 20171 . - . ID=g6019.t1;Parent=g6019;Name=g6019.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 20001 20171 . - . ID=g6019.t1.exon1;Parent=g6019.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 20001 20171 . - 0 ID=cds.g6019.t1;Parent=g6019.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS exon 19545 19760 . - . ID=g6019.t1.exon2;Parent=g6019.t1 NODE_607_length_20295_cov_40.5286 AUGUSTUS CDS 19545 19760 . - 0 ID=cds.g6019.t1;Parent=g6019.t1 #PROT g6019.t1 g6019 MALHISLAYPVALYPGRKAIDLLVLRGGHGMPTKTRTFVQNAIVVALTSVLAVLVPGVDVVFGFVGASSGVAITFGFPAMMWLSATRRGGRPSVGIHPGDVVYAKCLAAFAVAVGVLSVGVNIYQRIN* # ORIGINAL: g11103.t1 original gene structure, not modified by PASA NODE_3744_length_2851_cov_35.1823 AUGUSTUS gene 88 2125 . - . ID=g11103;Name=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS mRNA 88 2125 . - . ID=g11103.t1;Parent=g11103;Name=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS exon 2003 2125 . - . ID=g11103.t1.exon1;Parent=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS CDS 2003 2125 . - 0 ID=cds.g11103.t1;Parent=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS exon 1522 1647 . - . ID=g11103.t1.exon2;Parent=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS CDS 1522 1647 . - 0 ID=cds.g11103.t1;Parent=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS exon 88 1251 . - . ID=g11103.t1.exon3;Parent=g11103.t1 NODE_3744_length_2851_cov_35.1823 AUGUSTUS CDS 88 1251 . - 0 ID=cds.g11103.t1;Parent=g11103.t1 #PROT g11103.t1 g11103 MPHACNMVVAEHMQLSQAIEASRRNGVDLVTMAYITDAIGGKLSSLRNPLYTPTAGIYGTAKHASKTKVSVTGFRGLDRTDLELMLQRMGMEFSASLGRSTDILVAYDNQPTEKLVRAAACNIPVVTRQWVETCYTSWSKVSTRPFLLKQDANTVQEKGRGAPEGGAMGATTTTPLPAAPDTKTPATAAVVSEQAQHTRGTDAKSAPSTKPTPRNGHTMANGESKTSAADVPTAENGRRSSTQRPLQVPTAPTQTTNVVANALPSRSTVEEQDCSRQLFAGRKRTADDANLDTRDSTESAESHKCRRVNGWAEFVGAYGPKCGVPEGTSAWTSVRASVADLRPRVLVCGVNLARGIVERLGGTMAATPEECTHVVARKIRRTAKFLASLCLGRHIVNADWINDSVEAGRFLGVEKYTAFPTEEKLYNIVLRDSIATARKQKVFGGRFLYVSNFENAAELKDIIVAGGGVV* # PASA_UPDATE: g61.t1, single gene model update, valid-1, status:[pasa:asmbl_5093,status:12], valid-1 NODE_2836_length_5010_cov_52.9651 . gene 1 712 . - . ID=g61;Name=g61.t1 NODE_2836_length_5010_cov_52.9651 . mRNA 1 712 . - . ID=g61.t1;Parent=g61;Name=g61.t1 NODE_2836_length_5010_cov_52.9651 . exon 673 712 . - . ID=g61.t1.exon1;Parent=g61.t1 NODE_2836_length_5010_cov_52.9651 . CDS 673 712 . - 0 ID=cds.g61.t1;Parent=g61.t1 NODE_2836_length_5010_cov_52.9651 . exon 502 573 . - . ID=g61.t1.exon2;Parent=g61.t1 NODE_2836_length_5010_cov_52.9651 . CDS 502 573 . - 2 ID=cds.g61.t1;Parent=g61.t1 NODE_2836_length_5010_cov_52.9651 . exon 1 293 . - . ID=g61.t1.exon3;Parent=g61.t1 NODE_2836_length_5010_cov_52.9651 . CDS 1 293 . - 2 ID=cds.g61.t1;Parent=g61.t1;3_prime_partial=true #PROT g61.t1 g61 MDTPGCAAITQLIGAIRAIHDNLCSIQLPFVNRCINQAATMGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKFYVTIIDAPGH # ORIGINAL: g62.t1 original gene structure, not modified by PASA NODE_2836_length_5010_cov_52.9651 AUGUSTUS gene 1967 3390 . + . ID=g62;Name=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS mRNA 1967 3390 . + . ID=g62.t1;Parent=g62;Name=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS exon 1967 2102 . + . ID=g62.t1.exon1;Parent=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS CDS 1967 2102 . + 0 ID=cds.g62.t1;Parent=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS exon 2460 2978 . + . ID=g62.t1.exon2;Parent=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS CDS 2460 2978 . + 2 ID=cds.g62.t1;Parent=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS exon 3200 3390 . + . ID=g62.t1.exon3;Parent=g62.t1 NODE_2836_length_5010_cov_52.9651 AUGUSTUS CDS 3200 3390 . + 2 ID=cds.g62.t1;Parent=g62.t1 #PROT g62.t1 g62 MDVMYPSDAPVKQYEESASAVVAMDSLQPITVFVANGDCYLWSVEGTINLVNDNPTRYPAHSLRNTSRGTYPPSTAEVISSNDGMSYCITRGKRKSTCDSVDGADGAEGTDWIDGGVDAERNAHKKRFRGEPEPECEEPIEFASAAAMGALFTGESGPVPMSISSAEATDCLPGTPYAWTYPHTAAQRLRCRVFADLWSRGYYVTSGARFGGDFLVYSGDPLRFHSSFLAIVLDWDAAVNPLDMIRAGRLGKTVKKTALLCALEPESNGIMYSSLDWTGMA* # PASA_UPDATE: g3831.t1, single gene model update, valid-1, status:[pasa:asmbl_7144,status:12], valid-1 NODE_4250_length_1936_cov_38.0102 . gene 93 1375 . - . ID=g3831;Name=g3831.t1 NODE_4250_length_1936_cov_38.0102 . mRNA 93 1375 . - . ID=g3831.t1;Parent=g3831;Name=g3831.t1 NODE_4250_length_1936_cov_38.0102 . exon 93 1375 . - . ID=g3831.t1.exon1;Parent=g3831.t1 NODE_4250_length_1936_cov_38.0102 . CDS 93 1375 . - 0 ID=cds.g3831.t1;Parent=g3831.t1;3_prime_partial=true #PROT g3831.t1 g3831 MAVHVTLLRPLLALLLITCLCAHVSNGAVTPSDSDPACTSECPDAAVPSGCGTLAPTNANEALVVSSCMAVASGTYVFQYVNVIAGGTLFFVDDGGEIDFAANSILVENGGSLIAGAYCKPFGCSGGKLEIGLYGTDPTSSGTTAPTTPAIQCVGSGGCYDPSLVSNCCTVSGTNPCTNTTCPQTNYNAYFEGYSSAGLNFDGENSLFGFKVLGVSYGGTLRMFGRKGVAAADYSSTRATTCPVPSPDNDPLGWAALSGGGWGRLNADVSAGDASFATDRPVTFDAGDKVIITTTDWFVNHTEYAVVSDSVQSGQRVSLSAPLSYRHLGMVTQIDPSLTASNRNPNGAVDARAAFALLSRSIVVRSLGATANGAFPSPSACGTDASGSVDPACFFGGHVMVRQGFAAFQVQGVEFYQLGQGGRMGHY # ORIGINAL: g13763.t1 original gene structure, not modified by PASA NODE_2288_length_6855_cov_62.9808 AUGUSTUS gene 4860 6765 . - . ID=g13763;Name=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS mRNA 4860 6765 . - . ID=g13763.t1;Parent=g13763;Name=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 5819 6765 . - . ID=g13763.t1.exon1;Parent=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 5819 6765 . - 1 ID=cds.g13763.t1;Parent=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 5466 5593 . - . ID=g13763.t1.exon2;Parent=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 5466 5593 . - 2 ID=cds.g13763.t1;Parent=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 4860 5297 . - . ID=g13763.t1.exon3;Parent=g13763.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 4860 5297 . - 0 ID=cds.g13763.t1;Parent=g13763.t1 #PROT g13763.t1 g13763 EPVAGYIFACPVTVRGKFETVNPEIARTLFRISDSDLELARRTSGVLRGHSKNSVLLYATDEMRQMDPTITGEVEGVTAAMALAYIVDDPVEVLSTLDRPYLGIHAPKDVFADGARMQQLFSAAAAKEKDHNNMSSRGLTKVVEVAGGGMLETYTQLAGIVGPWIKSVASATTLPERPPPIQGATLTDFVAEASLGAGLVGQVFLARHVPTGRFCAIKRMRKSELIRFNAARRLINERDVLSMVESPFIVPLIASFQTPRFAFIAMEYIGGGELFSLLRLSRRFGEPVARFYACEVLWALQYLHSKDIVYRDLKPENIILDMRGHIRLVDLGFAKCIPDGRTFSFCSTPEYMAPEIVLDKGYGLAVDWWAYGVFLFHLLAGHLPFVGGNPHALFKSIAAGHYTIPSYFSPHAKSLISSLLVLNPDQRLGTPSRGGATGIRAHDFFAGVDWEAVSVQNVCPPFVPNMKSPTDASNFFCRDMAWINADDPSEQTAEDVSDAFADF* # ORIGINAL: g13762.t1 original gene structure, not modified by PASA NODE_2288_length_6855_cov_62.9808 AUGUSTUS gene 2223 4096 . + . ID=g13762;Name=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS mRNA 2223 4096 . + . ID=g13762.t1;Parent=g13762;Name=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 2223 2261 . + . ID=g13762.t1.exon1;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 2223 2261 . + 0 ID=cds.g13762.t1;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 2474 2626 . + . ID=g13762.t1.exon2;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 2474 2626 . + 0 ID=cds.g13762.t1;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 2986 3090 . + . ID=g13762.t1.exon3;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 2986 3090 . + 0 ID=cds.g13762.t1;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 3399 3613 . + . ID=g13762.t1.exon4;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 3399 3613 . + 0 ID=cds.g13762.t1;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 3982 4096 . + . ID=g13762.t1.exon5;Parent=g13762.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 3982 4096 . + 1 ID=cds.g13762.t1;Parent=g13762.t1 #PROT g13762.t1 g13762 MASSRGFRALDDEGSQDASSEEDKTTKEHQLRSTFVFWATRRPANVRQIDNYEDMVKRIGEFSTVEQFWAYYGHMVRPDDLPPGSDLHLFKTGIKPMWEDEGNKRGGKWIVRLNKGLASRCWENLVLAVVGDTFDVGDEICGAVVSIRQPEDIVSIWNKSADNKPAQLKIRDTLKAVLGLPATIPMEYKCHDASLKDRTSFRNTDVFR* # ORIGINAL: g13761.t1 original gene structure, not modified by PASA NODE_2288_length_6855_cov_62.9808 AUGUSTUS gene 2 955 . + . ID=g13761;Name=g13761.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS mRNA 2 955 . + . ID=g13761.t1;Parent=g13761;Name=g13761.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS exon 2 955 . + . ID=g13761.t1.exon1;Parent=g13761.t1 NODE_2288_length_6855_cov_62.9808 AUGUSTUS CDS 2 955 . + 0 ID=cds.g13761.t1;Parent=g13761.t1 #PROT g13761.t1 g13761 DLLGRQLLSTRNFNLLPIVDVVIFDNPAFFSISHPQLGDALLKLVDIRLSPSQVFVLQFPSEPIEIHPDIATDAFLNRFNISLGYNRGYFDVYRPLIRYIETFNSLASYRSVPAFAFDDAVLRQMAGGALIAAMISNCPSSVPSPRSRYLEELMQYVRVDSFGKCLHTKDLSADVIAKYQINTKAGHYASDWKAIKRDVFSGYPFAIAFENANCFDYVTEKPIDPLASGAIPIYMGAPNIAEYLPPNSYINARDLSPRALADYLRRILSDNGLYQSFHAWRSSDPSSWVAQRNVRSYSTDICKEISRFSEKCPGPTS* # PASA_UPDATE: g9608.t1, single gene model update, valid-1, status:[pasa:asmbl_7414,status:12], valid-1 NODE_4529_length_1493_cov_36.7357 . gene 91 656 . + . ID=g9608;Name=g9608.t1 NODE_4529_length_1493_cov_36.7357 . mRNA 91 656 . + . ID=g9608.t1;Parent=g9608;Name=g9608.t1 NODE_4529_length_1493_cov_36.7357 . five_prime_UTR 91 91 . + . ID=g9608.t1.utr5p1;Parent=g9608.t1 NODE_4529_length_1493_cov_36.7357 . exon 91 656 . + . ID=g9608.t1.exon1;Parent=g9608.t1 NODE_4529_length_1493_cov_36.7357 . CDS 92 397 . + 0 ID=cds.g9608.t1;Parent=g9608.t1;5_prime_partial=true NODE_4529_length_1493_cov_36.7357 . three_prime_UTR 398 656 . + . ID=g9608.t1.utr3p1;Parent=g9608.t1 #PROT g9608.t1 g9608 TVKCLLIYPNPESALNEEAGKLLLERYEEYAKHARLMTDIYAKPKGNAVFAKAVPPAAGDDSAAENDGTADDPSPKKRKEEKKPAAADKKKEDKKRSLKRL* # PASA_UPDATE: g5579.t1, single gene model update, valid-1, status:[pasa:asmbl_8243,status:12], valid-1 NODE_5704_length_747_cov_29.6384 . gene 28 725 . - . ID=g5579;Name=g5579.t1 NODE_5704_length_747_cov_29.6384 . mRNA 28 725 . - . ID=g5579.t1;Parent=g5579;Name=g5579.t1 NODE_5704_length_747_cov_29.6384 . exon 207 725 . - . ID=g5579.t1.exon1;Parent=g5579.t1 NODE_5704_length_747_cov_29.6384 . CDS 207 725 . - 0 ID=cds.g5579.t1;Parent=g5579.t1 NODE_5704_length_747_cov_29.6384 . exon 28 66 . - . ID=g5579.t1.exon2;Parent=g5579.t1 NODE_5704_length_747_cov_29.6384 . CDS 28 66 . - 0 ID=cds.g5579.t1;Parent=g5579.t1 #PROT g5579.t1 g5579 MQLNCHFEFHPETFTLAVNYFDRMLSSVKVKPSHVQLIAVTCLLIAGKMQEAWDAYPTLRELAVASNNAFSCNDIMRMEKIVLGKLGWDTNAVSPHVVLHQLMAHLPTDADTKARIVAEAEAYINLSCYEYGFLRFLPSTIACCAVASVLARRGRVEDKQLLLMSQVLTRTPVIVLSQLVESMGT* # ORIGINAL: g13503.t1 original gene structure, not modified by PASA NODE_1050_length_14414_cov_42.0651 AUGUSTUS gene 9084 9970 . - . ID=g13503;Name=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS mRNA 9084 9970 . - . ID=g13503.t1;Parent=g13503;Name=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 9924 9970 . - . ID=g13503.t1.exon1;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 9924 9970 . - 0 ID=cds.g13503.t1;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 9635 9814 . - . ID=g13503.t1.exon2;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 9635 9814 . - 1 ID=cds.g13503.t1;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 9276 9393 . - . ID=g13503.t1.exon3;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 9276 9393 . - 1 ID=cds.g13503.t1;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 9084 9152 . - . ID=g13503.t1.exon4;Parent=g13503.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 9084 9152 . - 0 ID=cds.g13503.t1;Parent=g13503.t1 #PROT g13503.t1 g13503 MENGDFLDEVFQLEGRFNREGWDAGARDGEVASFNEGVALGRPKGGQMAGEVGYYVGIARTCLALRGGVDGDAKAERIRKAATTLIAIGDAFPADDAAYPNLFEDLEKMRAKFKQLASMIGPIPKYSVDAGGASMAF* # PASA_UPDATE: g13501.t1, single gene model update, valid-1, status:[pasa:asmbl_192,status:12], valid-1 NODE_1050_length_14414_cov_42.0651 . gene 4089 5253 . - . ID=g13501;Name=g13501.t1 NODE_1050_length_14414_cov_42.0651 . mRNA 4089 5253 . - . ID=g13501.t1;Parent=g13501;Name=g13501.t1 NODE_1050_length_14414_cov_42.0651 . five_prime_UTR 5196 5253 . - . ID=g13501.t1.utr5p1;Parent=g13501.t1 NODE_1050_length_14414_cov_42.0651 . exon 4089 5253 . - . ID=g13501.t1.exon1;Parent=g13501.t1 NODE_1050_length_14414_cov_42.0651 . CDS 4377 5195 . - 0 ID=cds.g13501.t1;Parent=g13501.t1 NODE_1050_length_14414_cov_42.0651 . three_prime_UTR 4089 4376 . - . ID=g13501.t1.utr3p1;Parent=g13501.t1 #PROT g13501.t1 g13501 MSRALVVVGLIALASVVIAVAPPVSENLLTWLDPLASDAFVLASDGIHIRQWTDQSPRAKHFVQEDPSKQPTFVPFDESRRRDGDDGGGSGNGNGTGMVGSGGTIGSSPYRRRRTSDVATAHLFFVARSSSTSDEFVTESLFKVLTSSGRTFLDVGQVEFAGGAASAFAVSINAVANAATAVSTTNYANPSDVWTITVQPQMGWSTLVTIYKNNAFLSSSMLLGTPPYGLTSALLGSSFTGVIWEVMVYSDMTTDARTTTTLFLCEKHSISC* # ORIGINAL: g13500.t1 original gene structure, not modified by PASA NODE_1050_length_14414_cov_42.0651 AUGUSTUS gene 413 1927 . - . ID=g13500;Name=g13500.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS mRNA 413 1927 . - . ID=g13500.t1;Parent=g13500;Name=g13500.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 1766 1927 . - . ID=g13500.t1.exon1;Parent=g13500.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 1766 1927 . - 0 ID=cds.g13500.t1;Parent=g13500.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 413 1030 . - . ID=g13500.t1.exon2;Parent=g13500.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 413 1030 . - 0 ID=cds.g13500.t1;Parent=g13500.t1 #PROT g13500.t1 g13500 MLLLQVAVVYTDDPFGEGGAVAFKDAAPALGIEVLAFVSASSDSRRNKKTMLSQVSRIIDSGARVIIISMATTDAQVFLESAEALGIAGREDYVFIGADGWVLDELVVGWPGHENTLRGVIGTAAAVISGTPQYAAFVSALAAAGESTTEPINSFTAYAYDATYTFLSALNRTVVKLNAWGMSPQCLSSLYLSSNPANCSLSVGVRDSLYKNATCINATAVCRPKNGVIQFMQYLAPSGEVFGIHGLNPAAVLLSDLYE* # ORIGINAL: g13504.t1 original gene structure, not modified by PASA NODE_1050_length_14414_cov_42.0651 AUGUSTUS gene 10415 14147 . + . ID=g13504;Name=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS mRNA 10415 14147 . + . ID=g13504.t1;Parent=g13504;Name=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 10415 10417 . + . ID=g13504.t1.exon1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 10415 10417 . + 0 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 10569 10806 . + . ID=g13504.t1.exon2;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 10569 10806 . + 0 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 11049 11176 . + . ID=g13504.t1.exon3;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 11049 11176 . + 2 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 11438 11558 . + . ID=g13504.t1.exon4;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 11438 11558 . + 0 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 11950 12185 . + . ID=g13504.t1.exon5;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 11950 12185 . + 2 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 12427 12513 . + . ID=g13504.t1.exon6;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 12427 12513 . + 0 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 12899 13137 . + . ID=g13504.t1.exon7;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 12899 13137 . + 0 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 13515 13642 . + . ID=g13504.t1.exon8;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 13515 13642 . + 1 ID=cds.g13504.t1;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 13990 14147 . + . ID=g13504.t1.exon9;Parent=g13504.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 13990 14147 . + 2 ID=cds.g13504.t1;Parent=g13504.t1 #PROT g13504.t1 g13504 MEAVFEHDGRDETGIPADIHMEDALVDVYFDRAAVEYADESAVFHVETKTFSQQYSHLYFSRLTAMKKKVLEAARAKWGSGTDSRKFVDGVLSLQMDEECVIVGTLYKDMRLKPNILDEVVEERHLVRPPPRAKYVEADDVLVLEDHTGRVKLTGLPVENIVTGVIIGVLGHARLGGDFEVTDHCYAGFAPQAELLPSRDCEGKYVAIVSGFDVGDRGVLGASAAELSMLVDFLTGRLGTAEDHCFASKVTRLIIAGNSMAAPSDNEGVNKAKYLSRHTVAPSVAAIKEIDAIIENIATFMPVDVMPGANDPSNHILPQQPLHGCLFPRSRGLKSCVRTTNPHAARIGGVRFLGTSGHALDDLYKYVASEDRLHLMHMMLEWRHMAPTAPDTLACFPFFDKDPFIFETTPHVFFAGNQPEYQTKAVRGKSLPSPIHSLVFLVESL* # ORIGINAL: g13502.t1 original gene structure, not modified by PASA NODE_1050_length_14414_cov_42.0651 AUGUSTUS gene 7348 8577 . + . ID=g13502;Name=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS mRNA 7348 8577 . + . ID=g13502.t1;Parent=g13502;Name=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 7348 7380 . + . ID=g13502.t1.exon1;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 7348 7380 . + 0 ID=cds.g13502.t1;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 7554 7670 . + . ID=g13502.t1.exon2;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 7554 7670 . + 0 ID=cds.g13502.t1;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 7888 8074 . + . ID=g13502.t1.exon3;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 7888 8074 . + 0 ID=cds.g13502.t1;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS exon 8279 8577 . + . ID=g13502.t1.exon4;Parent=g13502.t1 NODE_1050_length_14414_cov_42.0651 AUGUSTUS CDS 8279 8577 . + 2 ID=cds.g13502.t1;Parent=g13502.t1 #PROT g13502.t1 g13502 MAPTVEFVPSEVSALFDAAWLHCDGKSEISTEAYFLAMSKLSHVVQLIGGIFTRVPTEAAEKVAILKEHAAKRGDAYKTLDSMMAFEVANDLTLEKGAPSGSRVALRVNRGLEFMISIMRRLVESDASTPFQALLKESYGETIGRFHPWAMRKVVGVAIHASPSRKVFLARLGLTEDERSQLTQIIDKATVVNAHVAGLFDKYSLLDLPMA* # PASA_UPDATE: g3574.t1, single gene model update, valid-1, status:[pasa:asmbl_5817,status:12], valid-1 NODE_3277_length_3849_cov_18.8392 . gene 1 3776 . - . ID=g3574;Name=g3574.t1 NODE_3277_length_3849_cov_18.8392 . mRNA 1 3776 . - . ID=g3574.t1;Parent=g3574;Name=g3574.t1 NODE_3277_length_3849_cov_18.8392 . exon 3728 3776 . - . ID=g3574.t1.exon1;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . CDS 3728 3776 . - 0 ID=cds.g3574.t1;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . exon 2785 3497 . - . ID=g3574.t1.exon2;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . CDS 2785 3497 . - 2 ID=cds.g3574.t1;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . exon 2377 2487 . - . ID=g3574.t1.exon3;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . CDS 2377 2487 . - 0 ID=cds.g3574.t1;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . exon 1079 1782 . - . ID=g3574.t1.exon4;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . CDS 1079 1782 . - 0 ID=cds.g3574.t1;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . exon 1 859 . - . ID=g3574.t1.exon5;Parent=g3574.t1 NODE_3277_length_3849_cov_18.8392 . CDS 1 859 . - 1 ID=cds.g3574.t1;Parent=g3574.t1;3_prime_partial=true #PROT g3574.t1 g3574 MRIGRCEALVADSMFERVSTNSHGGCIATAAGTNLTVLRTTFTSCYALSSSTRNGGSIYVSSSNRVVIDSSTFYDSYSQGGNGGTIYISGATAPVVISKSSFSLSLTFNSGGAVYVSSSPKVDITECSFENNEGYVGGALFFTEVRSTVITHSTFTAGYGEYKGGVLHSQASAAAANLTMIGCNATGNIVRYDNSNAQYGVAGALSLSGSNLTVEVTGSMFERNMALDDSDGGVVLVEGSVAAIFANCTFRNNTGYSGSVFLVRGISSLLCDQCAFLNNKGIFGAVYSEEKALQGSAIAFDAAQVSVTLRNTNFTNNIAHDTGGAIYASLTGRPSRPCLTIFGGFSRGDSASQGGFLWTTNAQSVDDRERDRLPSADESRPGIIIDSVTIEDASATVGGALHISNTICVVLSNSHLSGCSADNGGTGYLGGKSLTILSNSVVEMGRAVSGGAFIVTEAAVLETRQGTRFVRNAAVGAGGGLNVQFEGEIVMDDVIAHGNAAVIGGFIALSGKAHAHLRNSIVRRNRADDYGGGVSLTGQSEFLVYNVTFESNCATSQGGAIRMDGDTWLTRDDSTAGLGVDSTALSAVFSANGASEGGAIFTGNTAIVNLGFALFDGNIATKAGGALFATGCSELYLWEGALKRNHAMESGEGGALVYEDLAYAVFSHFNFTGNIAQLGGAISGSADTRPPVCKLTAAAVSLDNEESAADNSDDEGLFCHSESSSRRRRSRREALKRRDLIDDGLDDLIDPDTGNYYEKAAMALVECRLEGNIAQSNGGAIRVVGGAKAVVRRSAIVGNAVTAEGDDGVGSA # ORIGINAL: g3017.t1 original gene structure, not modified by PASA NODE_4748_length_1275_cov_53.6483_potentialcontaminant AUGUSTUS gene 2 1261 . + . ID=g3017;Name=g3017.t1 NODE_4748_length_1275_cov_53.6483_potentialcontaminant AUGUSTUS mRNA 2 1261 . + . ID=g3017.t1;Parent=g3017;Name=g3017.t1 NODE_4748_length_1275_cov_53.6483_potentialcontaminant AUGUSTUS exon 2 1261 . + . ID=g3017.t1.exon1;Parent=g3017.t1 NODE_4748_length_1275_cov_53.6483_potentialcontaminant AUGUSTUS CDS 2 1261 . + 0 ID=cds.g3017.t1;Parent=g3017.t1 #PROT g3017.t1 g3017 GIVPSFVKAQSVDLYSAHIDLNGLAGVPRVRLFMCRTAQNAHITDLSALRHARFVELNNLEELEDLRCLENVREVVLKKCPRIATLPAVTYLRAFTWHRSPLTAIPPELAGVQFLDLSSSRKLEDVSAARAVRELILLNCFAVNNLSALGSVHTLRVSNCRNLDVSALGGVHTLYLAEVRSLVGVERLGGVHHLTLISTKFNICAVSQLGTVHTLCLWSRDLKDVSALGGVHALFIGECKGVSDVSALGNCHTLDLTRCSVSDVTMLTRVHTLKLSLTSVTDVSMLGDVHVLDLTFCKNVLDVSALGNVYDLNLTGCFVLSDVSMLGRVHALNLSYLRVSAHDLACLAGVHTLNLSHCEELVDVSALFGVHTLILDYTAVSDVACLAGGVHVLSVQNCANIDLTQLGSVRIPKIIVANE* # PASA_UPDATE: g2839.t1, single gene model update, valid-1, status:[pasa:asmbl_8077,status:12], valid-1 NODE_5447_length_847_cov_28.7966_potentialcontaminant . gene 23 847 . + . ID=g2839;Name=g2839.t1 NODE_5447_length_847_cov_28.7966_potentialcontaminant . mRNA 23 847 . + . ID=g2839.t1;Parent=g2839;Name=g2839.t1 NODE_5447_length_847_cov_28.7966_potentialcontaminant . exon 23 847 . + . ID=g2839.t1.exon1;Parent=g2839.t1 NODE_5447_length_847_cov_28.7966_potentialcontaminant . CDS 23 847 . + 0 ID=cds.g2839.t1;Parent=g2839.t1;5_prime_partial=true;3_prime_partial=true #PROT g2839.t1 g2839 VCVCVCVCVCVCVCVCVCVCVYVCMCVCVGVWVCSVVLGVVRLTVFLPELVAWTLYAPIVITLSVFNEWAHCCGSASDLSSFPLHLNCLPNIKIQANATPSIVPPRVIPGSTDEGEAKKKEKKEKKDKKGKKEKKEKKEKKEKKEKKDRERHDDIAGGDRPTVGREEGHRETDVRGRVEHERADGKYTHSGQRYREEEERRPSESHRDRERSREGGRVFETARNRQTERERESARDRERDRERDGARDRRVDETGRRHDDVSDDGGDDRRRRRPR # PASA_UPDATE: g3129.t1, single gene model update, valid-1, status:[pasa:asmbl_9100,status:12], valid-1 NODE_7329_length_448_cov_42.563_potentialcontaminant . gene 1 422 . - . ID=g3129;Name=g3129.t1 NODE_7329_length_448_cov_42.563_potentialcontaminant . mRNA 1 422 . - . ID=g3129.t1;Parent=g3129;Name=g3129.t1 NODE_7329_length_448_cov_42.563_potentialcontaminant . five_prime_UTR 349 422 . - . ID=g3129.t1.utr5p1;Parent=g3129.t1 NODE_7329_length_448_cov_42.563_potentialcontaminant . exon 1 422 . - . ID=g3129.t1.exon1;Parent=g3129.t1 NODE_7329_length_448_cov_42.563_potentialcontaminant . CDS 1 348 . - 0 ID=cds.g3129.t1;Parent=g3129.t1;3_prime_partial=true #PROT g3129.t1 g3129 MLELAMKIGFDLGFRVDDDVLFQKRGWDELYVNAVSTGPYEHLAFLHVAHRLELFQKVHGKGGMELPPPTRLGDSLVSHVSVQDVMGAFWTFTPRLIRTIGYIDELNFPTRGQWHT # PASA_UPDATE: g5130.t1, single gene model update, valid-1, status:[pasa:asmbl_3353,status:12], valid-1 NODE_2045_length_7952_cov_39.0038 . gene 57 2101 . + . ID=g5130;Name=g5130.t1 NODE_2045_length_7952_cov_39.0038 . mRNA 57 2101 . + . ID=g5130.t1;Parent=g5130;Name=g5130.t1 NODE_2045_length_7952_cov_39.0038 . exon 57 181 . + . ID=g5130.t1.exon1;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . CDS 57 181 . + 0 ID=cds.g5130.t1;Parent=g5130.t1;5_prime_partial=true NODE_2045_length_7952_cov_39.0038 . exon 613 752 . + . ID=g5130.t1.exon2;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . CDS 613 752 . + 1 ID=cds.g5130.t1;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . exon 1018 1157 . + . ID=g5130.t1.exon3;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . CDS 1018 1157 . + 2 ID=cds.g5130.t1;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . exon 1633 2101 . + . ID=g5130.t1.exon4;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . CDS 1633 1860 . + 0 ID=cds.g5130.t1;Parent=g5130.t1 NODE_2045_length_7952_cov_39.0038 . three_prime_UTR 1861 2101 . + . ID=g5130.t1.utr3p1;Parent=g5130.t1 #PROT g5130.t1 g5130 QALYDERLLPWFTVDGFRTLLALVGMNGQGIGTSSLNVHCRRLQALALDEKERGELDGAIDALYDAIEDVSGDFDECQGSGLYAIQSTCNHSCSPNAVPQFKSGDTTLTMIALRDIAAGEEVCISYLDECERRRKAIVRREHLLENYLFHCDCVRCVAADNGVDESDSDSDSDADSDAGFETNSDDCSDDNEGGEGSHALRDHGTHSGHH* # PASA_UPDATE: g5131.t1, single gene model update, valid-1, status:[pasa:asmbl_3354,status:12], valid-1 NODE_2045_length_7952_cov_39.0038 . gene 3478 7952 . + . ID=g5131;Name=g5131.t1 NODE_2045_length_7952_cov_39.0038 . mRNA 3478 7952 . + . ID=g5131.t1;Parent=g5131;Name=g5131.t1 NODE_2045_length_7952_cov_39.0038 . five_prime_UTR 3478 3517 . + . ID=g5131.t1.utr5p1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . five_prime_UTR 3708 3750 . + . ID=g5131.t1.utr5p2;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 3478 3517 . + . ID=g5131.t1.exon1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 3708 3810 . + . ID=g5131.t1.exon2;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 3751 3810 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 3957 4067 . + . ID=g5131.t1.exon3;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 3957 4067 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 4274 4406 . + . ID=g5131.t1.exon4;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 4274 4406 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 4719 4822 . + . ID=g5131.t1.exon5;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 4719 4822 . + 2 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 5117 5174 . + . ID=g5131.t1.exon6;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 5117 5174 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 5482 5576 . + . ID=g5131.t1.exon7;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 5482 5576 . + 2 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 5744 5806 . + . ID=g5131.t1.exon8;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 5744 5806 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 6082 6149 . + . ID=g5131.t1.exon9;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 6082 6149 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 6340 6387 . + . ID=g5131.t1.exon10;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 6340 6387 . + 1 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 6658 6760 . + . ID=g5131.t1.exon11;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 6658 6760 . + 1 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 7118 7236 . + . ID=g5131.t1.exon12;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 7118 7236 . + 0 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 7373 7591 . + . ID=g5131.t1.exon13;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 7373 7591 . + 1 ID=cds.g5131.t1;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . exon 7763 7952 . + . ID=g5131.t1.exon14;Parent=g5131.t1 NODE_2045_length_7952_cov_39.0038 . CDS 7763 7952 . + 1 ID=cds.g5131.t1;Parent=g5131.t1;3_prime_partial=true #PROT g5131.t1 g5131 MADPAPAPVNEPDWLRLQKKIFSRYIEQRLKIGGTKVKVSNIIEDLKDGVLLVQLIESLSGKTYAVKPKPAKARIQQIDQVSKIFEWITKEIGVKSTAQATDIVDGNEKSVLGLIFQIIIRYMKLDEEDQQSGDIKEALLLWLRNKTAGYANVKIDNLTKSFHDGLAFNALIHRMRPKLIPFDTLTKEDKVKNITLALDTAAKYCNLEKYLEPADVPHLDELGSVVYLYDWYSAIIYLQKQDIAARRIGKLADMTKLHDSLKAEYNQGAATLSQWLEGKVKVLSDRTIDNSMAGIKGRLAAFYEYKSKEKSDKIVVSLDLNALFDNLALRLSNNKRPPFNPANGLTPAAFDERFLALERAEAEASVALHAELERQIKLDKLSKRFQADAQNLNSYFAEKRAYLSKAEQVDSVDICQYHLETFALYDADFQNTKNSRVAALSKISQQLTAEKYEFIAT # ORIGINAL: g14140.t1 original gene structure, not modified by PASA NODE_2333_length_6692_cov_50.3078 AUGUSTUS gene 2638 5717 . - . ID=g14140;Name=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS mRNA 2638 5717 . - . ID=g14140.t1;Parent=g14140;Name=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 5664 5717 . - . ID=g14140.t1.exon1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 5664 5717 . - 0 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 5363 5547 . - . ID=g14140.t1.exon2;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 5363 5547 . - 0 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 5157 5228 . - . ID=g14140.t1.exon3;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 5157 5228 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 4873 4944 . - . ID=g14140.t1.exon4;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 4873 4944 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 4539 4610 . - . ID=g14140.t1.exon5;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 4539 4610 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 4186 4257 . - . ID=g14140.t1.exon6;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 4186 4257 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 3677 3748 . - . ID=g14140.t1.exon7;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 3677 3748 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 3507 3578 . - . ID=g14140.t1.exon8;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 3507 3578 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 3338 3409 . - . ID=g14140.t1.exon9;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 3338 3409 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 3145 3216 . - . ID=g14140.t1.exon10;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 3145 3216 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 2975 3046 . - . ID=g14140.t1.exon11;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 2975 3046 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 2809 2880 . - . ID=g14140.t1.exon12;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 2809 2880 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 2638 2713 . - . ID=g14140.t1.exon13;Parent=g14140.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 2638 2713 . - 1 ID=cds.g14140.t1;Parent=g14140.t1 #PROT g14140.t1 g14140 MLQSDMENRLSIGRLGCIGKRRIVSSGVHVVFYNCLSALVFAVCFLCQAEGVVGACPDTCTCNGGGAVLSCEFRNDTTSLDWSDLQLTSVASGIFDGLSELTDLYLYSNEIVTLPSGIFDKLTALTTLDLGSNQIAILPSGIFDKLTALTTLDLYTPQTVTIPTGIFDKLIALNTLNLYFHQIATLPSGIFDKLTALTTLALYSNQIATLPSGIFDKLTALTDLNLNSNQIATLPSGIFDRLTALTQLNLNSNQIATLPSGIFDKLSALTNLNLNSNQIATLPSGIFDKLSALSWLDLNTNQIATLPSGIFDKLTALSGLDLASNQIATLPSGIFDELTMLNKL* # ORIGINAL: g14139.t1 original gene structure, not modified by PASA NODE_2333_length_6692_cov_50.3078 AUGUSTUS gene 231 1234 . - . ID=g14139;Name=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS mRNA 231 1234 . - . ID=g14139.t1;Parent=g14139;Name=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 1018 1234 . - . ID=g14139.t1.exon1;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 1018 1234 . - 0 ID=cds.g14139.t1;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 638 852 . - . ID=g14139.t1.exon2;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 638 852 . - 2 ID=cds.g14139.t1;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 411 525 . - . ID=g14139.t1.exon3;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 411 525 . - 0 ID=cds.g14139.t1;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS exon 231 279 . - . ID=g14139.t1.exon4;Parent=g14139.t1 NODE_2333_length_6692_cov_50.3078 AUGUSTUS CDS 231 279 . - 2 ID=cds.g14139.t1;Parent=g14139.t1 #PROT g14139.t1 g14139 MAGPVAGGVVGATVGAVCIVFAIVFVRKQMARKKMEALARSEIDLIDTVVRRPEIAEIEIPGSHIHLRNRIGEGEFGEVYLADITPRSGNVAAIKAAVKTFKITTLSSADEIRSARSAFMAEIDLMRTIPNHTNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLISSNANDFKSVDLLCFCIDIARGMEHIAKCGIVH # ORIGINAL: g3705.t1 original gene structure, not modified by PASA NODE_431_length_23842_cov_41.9454 AUGUSTUS gene 20752 23705 . + . ID=g3705;Name=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS mRNA 20752 23705 . + . ID=g3705.t1;Parent=g3705;Name=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 20752 20832 . + . ID=g3705.t1.exon1;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 20752 20832 . + 0 ID=cds.g3705.t1;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 21045 21187 . + . ID=g3705.t1.exon2;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 21045 21187 . + 0 ID=cds.g3705.t1;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 21529 21597 . + . ID=g3705.t1.exon3;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 21529 21597 . + 1 ID=cds.g3705.t1;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 21783 21912 . + . ID=g3705.t1.exon4;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 21783 21912 . + 1 ID=cds.g3705.t1;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 22086 23705 . + . ID=g3705.t1.exon5;Parent=g3705.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 22086 23705 . + 0 ID=cds.g3705.t1;Parent=g3705.t1 #PROT g3705.t1 g3705 MTAVKSISRGIEAMGVQKDESLRKKMQLELYADTGAAKKTSVCEYVTDLLESVFKFLIFAHHRDMLDAVEDLLKKKKVDYIRIDGSTTPEKRQNGCDRFQGEDICRVAVLSITAANAGLTLTAASVVVFAELFWNPGVLLQAEDRVHRIGQESDVSIHYLLAKGTVDDVIWPMLKSKIDVLGKCGLSGAFDTPLSGGGALYRSPRTALAFDAHAHATSASAFVESAANAESADSRAVDVTHTAVGDLGCIAADSHSHVTAPPSAARVTCANSPAVDATATDDHAIAAHVTLATNPPPSRGVRVSSPAVMTANPRAITPTALSGATPAVTGIAAVLTPARREVDSAGTAGPITASSGVVVGFPHATTGAKGLGAPTTPAAADGGSRDGAVASERLGLPHAADSLRRTLLPPANNSKPSLPIFGCPWAAAGPTLGGGGGGVVGSTLPVTVNAKYSMNAVRESPTVTAGAAVPHHVPRDTPMDAVSTESAVAALPSTNNPYKKCARVFPQGHVQMQMQMQHVANEPPLSACGTSPPASVTAVTGMNPYKRKAPVEALPTAPTQAIQCARNPLGEKVLSENVSDGDQRARAGRTVVVDCKLPLVPAVPASGEGAFLNPQCATAAAADNTSHGAVGVGVGVGVGVGVGVGDPTAAPPLPLAMARPTVTVADNPYKRRKMETASLS* # ORIGINAL: g3702.t1 original gene structure, not modified by PASA NODE_431_length_23842_cov_41.9454 AUGUSTUS gene 13726 15120 . + . ID=g3702;Name=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS mRNA 13726 15120 . + . ID=g3702.t1;Parent=g3702;Name=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 13726 14047 . + . ID=g3702.t1.exon1;Parent=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 13726 14047 . + 0 ID=cds.g3702.t1;Parent=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 14480 14560 . + . ID=g3702.t1.exon2;Parent=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 14480 14560 . + 2 ID=cds.g3702.t1;Parent=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 14750 15120 . + . ID=g3702.t1.exon3;Parent=g3702.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 14750 15120 . + 2 ID=cds.g3702.t1;Parent=g3702.t1 #PROT g3702.t1 g3702 MTSVLPVTVTPPPVTVTSIPPQETTTSLVPVTVTPPPVTVTVVPSNETVTALVPVTVTPPAVTVTVVPPKETVVVTVAVSSAGLYVPVEPSYCGRDGDDGVMFVGEFALGNYAQEIRLRRHNGEQVTCKCPIPTGAGATGDLDSSLVNTTTAAFASATATAAITTSRVSPSPTAATTTASPATTTIQSQTPSPTLQPAPVNVSYSVVVITSNAEGAGTGGSVYFSVVGPTGDSGDVLHWQARLASAPRGSSSGRGLM* # PASA_UPDATE: g3703.t1, single gene model update, valid-1, status:[pasa:asmbl_7220,status:3], valid-1 NODE_431_length_23842_cov_41.9454 . gene 16423 19018 . + . ID=g3703;Name=g3703.t1 NODE_431_length_23842_cov_41.9454 . mRNA 16423 19018 . + . ID=g3703.t1;Parent=g3703;Name=g3703.t1 NODE_431_length_23842_cov_41.9454 . five_prime_UTR 16423 16557 . + . ID=g3703.t1.utr5p1;Parent=g3703.t1 NODE_431_length_23842_cov_41.9454 . exon 16423 18119 . + . ID=g3703.t1.exon1;Parent=g3703.t1 NODE_431_length_23842_cov_41.9454 . CDS 16558 18119 . + 0 ID=cds.g3703.t1;Parent=g3703.t1 NODE_431_length_23842_cov_41.9454 . exon 18313 19018 . + . ID=g3703.t1.exon2;Parent=g3703.t1 NODE_431_length_23842_cov_41.9454 . CDS 18313 18934 . + 1 ID=cds.g3703.t1;Parent=g3703.t1 NODE_431_length_23842_cov_41.9454 . three_prime_UTR 18935 19018 . + . ID=g3703.t1.utr3p1;Parent=g3703.t1 #PROT g3703.t1 g3703 MDGIFAYISQRKGKAAATAVVTALALNYARKSYCAVPKQQPKANAENAEQQRRNRSVGVNKEFFTRLAELIRIVIPSWNSHEAGMLALHTGSLVVRTFLSLYVASLDGAITRSIVEKNGPQFARDLAKWLALAVPATFINSMIRYLESKLALAFRTRLVDHAYKMYMDSETYYRIGNLDSRLANPDQCLTEDVANFSASLAHIYSHISKPFLDVFLMSLQLVRLSVQTAGLASTIKPSVLGMVVIACTARILRKLSPPFGRLVAEQAQRDGNLRYVHSRVITHAEEIAFYGGHKIELGVLKRSYDALVRQMDRIYKHKLYYVMLEQFLMKYMWSTCGMCMIAIPALAAPPNVVMADGSVEAGEGDSTGTRTQKYIEAKSLLANAADAIERIMSSYKEITELAGYTSRVSDMMRVFNDVHEGHYQKKMVENDAGIELNGSGDVSERDDGLVILEGVPVVTPNGDVLVKSLSLEVQPGTHVLITGPNGCGKSSLFRMLGALWPVHGGRMVRPMRKQMFYIPQKPYLSLGNLREQVIYPDTIDDMRRKGLTDAHLETIMEQVSLRYVVQREGGWDALGDWSDVLSGGEKQRVGMARLFYHRPIYALLDECTSAVSIDVEGSMYQTAKDMGITLLTVTHRPSLWKFHTHLLQFDGEGGWRFTVLDANARLSLKEEKTHLEAQLTGIPRAQERLRELCELLGEDSVLLPSSAVEKEKEEDDVVPEKSGEHAE* # PASA_UPDATE: g3700.t1, single gene model update, valid-1, status:[pasa:asmbl_7219,status:12], valid-1 NODE_431_length_23842_cov_41.9454 . gene 6577 10671 . + . ID=g3700;Name=g3700.t1 NODE_431_length_23842_cov_41.9454 . mRNA 6577 10671 . + . ID=g3700.t1;Parent=g3700;Name=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 6577 6645 . + . ID=g3700.t1.exon1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 6577 6645 . + 0 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 6822 6940 . + . ID=g3700.t1.exon2;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 6822 6940 . + 0 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 7160 7669 . + . ID=g3700.t1.exon3;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 7160 7669 . + 1 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 7877 7959 . + . ID=g3700.t1.exon4;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 7877 7959 . + 1 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 8230 9815 . + . ID=g3700.t1.exon5;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 8230 9815 . + 2 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 10013 10115 . + . ID=g3700.t1.exon6;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 10013 10115 . + 0 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . exon 10289 10671 . + . ID=g3700.t1.exon7;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . CDS 10289 10416 . + 2 ID=cds.g3700.t1;Parent=g3700.t1 NODE_431_length_23842_cov_41.9454 . three_prime_UTR 10417 10671 . + . ID=g3700.t1.utr3p1;Parent=g3700.t1 #PROT g3700.t1 g3700 MAGDARPLRASIVQAVDVLRQTKDEAAASLLSRLSSPLRPLDSDVWQFIDSILLDSDRSRKASPDVPSSDLDILSATLAASLSSLTHVIPEDVRLAVCAKAETSAVALLCKAFRYGPTTTGAGGRSHASGSASSSSSASTNSTAHAHTQAHAHAHGNANVHAHGHLSNESTVAGRSSIPAAPGSPVPFTYQCHVEWLRGIETAARLAMQRKFPGYEAEGCRALYTRPPVVYVCTEPTRREVERWEEVRLALSLPTGSLRFVAPRPNQSLDFAALEATVHEDGANGCSPLFVALSVDYCAPADIAAATRLKTLCDKHTMWLHAFGNGLAAFSVGQTTPVLEAVAASADGIVADPSGWLGLPGVPYVTLLREPAHPSLRRMLRLGARIDCALHLGAVVSLVECLKRLGKDGACDRVKATFSLSRKFGERIAGMSSVRQIDASNAQHSVLFTYDSGVRQGAFASASSASVVDGDDSMGSHTTAELFCASANASILQALSGAAHIVGIEPFGADGLPCLKFDPFVRGGTLGASGEGWSNLEKCLDAIDERANAIAAAVRCRPSFAESVAVSDSLHLAHVDLRHGVSARDIGSSSTARQSDDDDHVRQFPFDSDGPVIAPASSDSSHRGAYPASTLSSPTVSAASLVAPHSSSRPSWLADTVCASASPSSLAAKVGLGAVRYVPPFLSEAMLTGEVLVSLEEMNGALADRLSELSSVYTRGKDADGRVCVVVGVVDSALREEHAGELVALIAETATALERSTHFIDDVSVIIQQVIQKAEDDIRRETEHKQQEEGFIRQLPVVGSMLNWWSPPPKFTELSGRSFSLTSGVLESTEAVIKRPAKHAAASAAPLLSDIADEESDENQRRTLH* # ORIGINAL: g3701.t1 original gene structure, not modified by PASA NODE_431_length_23842_cov_41.9454 AUGUSTUS gene 11845 13705 . + . ID=g3701;Name=g3701.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS mRNA 11845 13705 . + . ID=g3701.t1;Parent=g3701;Name=g3701.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 11845 12050 . + . ID=g3701.t1.exon1;Parent=g3701.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 11845 12050 . + 0 ID=cds.g3701.t1;Parent=g3701.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS exon 12643 13705 . + . ID=g3701.t1.exon2;Parent=g3701.t1 NODE_431_length_23842_cov_41.9454 AUGUSTUS CDS 12643 13705 . + 1 ID=cds.g3701.t1;Parent=g3701.t1 #PROT g3701.t1 g3701 MRNQRAAAKCTGRVLQGFESPFGERCKTSPTSRAQDESWGHRSTMRGRRVPRSGTRFSSRVNLGNPINSLKRITRALQILNNPVLTKIDGFGALESIGDDLRTTTRRAKYVNGNEIELCNLQVYYYFEVGDKARTGPRLYIASNPALTDIVGFNKLAYIGGGPMRITNNPILARISGLQSLATIECIGTNQMGSKIMRNDSLATLDGLASLQTLTMSLEIRFNPLLRNLDGLRNVQGVASTPEANNAVDCGPHGCYKGFYVTDNDKLANITGLRSLQTVYGPLTIQRNSALCVETGLAANFTLRGIAVSLTDNASPSVCATRTSITCDPTCSTCTGSSPTECVSCNGSGDNVLDGGRCVPVCQALRNCPVTSSSAALPSVATQSAIAPAVTQTPLAPSSTQPPSCVASTATSFIPVTVTPPP* # PASA_UPDATE: g3704.t1, single gene model update, valid-1, status:[pasa:asmbl_7222,status:12], valid-1 NODE_431_length_23842_cov_41.9454 . gene 19274 19994 . - . ID=g3704;Name=g3704.t1 NODE_431_length_23842_cov_41.9454 . mRNA 19274 19994 . - . ID=g3704.t1;Parent=g3704;Name=g3704.t1 NODE_431_length_23842_cov_41.9454 . exon 19274 19994 . - . ID=g3704.t1.exon1;Parent=g3704.t1 NODE_431_length_23842_cov_41.9454 . CDS 19449 19994 . - 0 ID=cds.g3704.t1;Parent=g3704.t1 NODE_431_length_23842_cov_41.9454 . three_prime_UTR 19274 19448 . - . ID=g3704.t1.utr3p1;Parent=g3704.t1 #PROT g3704.t1 g3704 MGGMGVGAMNNNGAFGGQPFGQQPQNGFGGAQMQPHMQANSSFGGMGGGGFGGFGAQQQQQQQQQQQQQQQQQLLQQQQQLALPGFGGFGGSPGGLQQQQPLHPAGGGFAPTAQPSPFGAPSQSHNQGAVVPSAGAVSPSPPGAVAGDAGSTLSDADMQAFAAGKFQFGLIPEVAPPQSVC* # PASA_UPDATE: g3698.t1, single gene model update, valid-1, status:[pasa:asmbl_7223,status:12], valid-1 NODE_431_length_23842_cov_41.9454 . gene 163 4544 . - . ID=g3698;Name=g3698.t1 NODE_431_length_23842_cov_41.9454 . mRNA 163 4544 . - . ID=g3698.t1;Parent=g3698;Name=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 4464 4544 . - . ID=g3698.t1.exon1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 4464 4544 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 3907 4101 . - . ID=g3698.t1.exon2;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 3907 4101 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 3167 3262 . - . ID=g3698.t1.exon3;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 3167 3262 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 2584 2724 . - . ID=g3698.t1.exon4;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 2584 2724 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 2169 2327 . - . ID=g3698.t1.exon5;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 2169 2327 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 1753 1917 . - . ID=g3698.t1.exon6;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 1753 1917 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 1519 1600 . - . ID=g3698.t1.exon7;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 1519 1600 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 1180 1335 . - . ID=g3698.t1.exon8;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 1180 1335 . - 2 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 928 1007 . - . ID=g3698.t1.exon9;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 928 1007 . - 2 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 515 597 . - . ID=g3698.t1.exon10;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 515 597 . - 0 ID=cds.g3698.t1;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . exon 163 209 . - . ID=g3698.t1.exon11;Parent=g3698.t1 NODE_431_length_23842_cov_41.9454 . CDS 163 209 . - 1 ID=cds.g3698.t1;Parent=g3698.t1;3_prime_partial=true #PROT g3698.t1 g3698 MAAFRMPSKLALVATRIAPVVFRVPPARRSDILSTYWSRVTAAVRDATVGTARQPNIEMDSSGKTGDELVRRLLRVSLRTNRTKEGEDLMPEHEKLEFFKIVASDFGVDREDLMAAVDSLKAAEGRGDVTIARAEERLRSATVPMYNILFGHIATQPNGLKALINMRADLLSLLSEEHATAGQHHAYLRTLSDEMRGVLASWFAVGYLEVQPITWESPASVLEKIMHYEAVHPMGGWDDLKRRLGPARRCFAFFHRSMPDEPLVVLHVALTSKIATSIQGVIDVSEGGLPSNVSTAIFYSISATQKGLAGVELGNFLIKRVVKLLKAEFPAMETFCTLSPIPGFRSWFDVRLQRWSAEEFFTPQEAAALLSATHRHGDDVMTVFKDALGAHWHKESPSVMAALKTPLMRACARYLYHEKKRTVALDPV # PASA_UPDATE: g3699.t1, single gene model update, valid-1, status:[pasa:asmbl_7218,status:3], valid-1 NODE_431_length_23842_cov_41.9454 . gene 4788 5581 . + . ID=g3699;Name=g3699.t1 NODE_431_length_23842_cov_41.9454 . mRNA 4788 5581 . + . ID=g3699.t1;Parent=g3699;Name=g3699.t1 NODE_431_length_23842_cov_41.9454 . five_prime_UTR 4788 4876 . + . ID=g3699.t1.utr5p1;Parent=g3699.t1 NODE_431_length_23842_cov_41.9454 . exon 4788 5164 . + . ID=g3699.t1.exon1;Parent=g3699.t1 NODE_431_length_23842_cov_41.9454 . CDS 4877 5164 . + 0 ID=cds.g3699.t1;Parent=g3699.t1 NODE_431_length_23842_cov_41.9454 . exon 5382 5581 . + . ID=g3699.t1.exon2;Parent=g3699.t1 NODE_431_length_23842_cov_41.9454 . CDS 5382 5531 . + 0 ID=cds.g3699.t1;Parent=g3699.t1 NODE_431_length_23842_cov_41.9454 . three_prime_UTR 5532 5581 . + . ID=g3699.t1.utr3p1;Parent=g3699.t1 #PROT g3699.t1 g3699 MDAISSGFNTGAILIPVLACATAHWFAGGLWFSPVMVAAPYTRLVLASRGVSRNNGKLEMEASMMLVSVIASICQASSLFFLFRTLGVTNVEEAAKAVIFLWLGFVVASSAPDYAFKKHSLGLFAIHIGHLLFALLASAFVYLLF* # PASA_UPDATE: g14273.t1, single gene model update, valid-1, status:[pasa:asmbl_2338,status:12], valid-1 NODE_168_length_33751_cov_45.748 . gene 31055 33633 . - . ID=g14273;Name=g14273.t1 NODE_168_length_33751_cov_45.748 . mRNA 31055 33633 . - . ID=g14273.t1;Parent=g14273;Name=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 33319 33633 . - . ID=g14273.t1.exon1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 33319 33633 . - 0 ID=cds.g14273.t1;Parent=g14273.t1;5_prime_partial=true NODE_168_length_33751_cov_45.748 . exon 33024 33131 . - . ID=g14273.t1.exon2;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 33024 33131 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 32597 32782 . - . ID=g14273.t1.exon3;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 32597 32782 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 32264 32356 . - . ID=g14273.t1.exon4;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 32264 32356 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 31970 32107 . - . ID=g14273.t1.exon5;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 31970 32107 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 31575 31703 . - . ID=g14273.t1.exon6;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 31575 31703 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 31350 31440 . - . ID=g14273.t1.exon7;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 31350 31440 . - 0 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . exon 31055 31214 . - . ID=g14273.t1.exon8;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . CDS 31138 31214 . - 2 ID=cds.g14273.t1;Parent=g14273.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 31055 31137 . - . ID=g14273.t1.utr3p1;Parent=g14273.t1 #PROT g14273.t1 g14273 GNNGAIRRLLHVAVSDVNDDVRRAAVTSLGFVLFRTPEQCPSVVSLLSESYNPHVRYGAAMALGISCAGTGLREAVAILEPMASDAVSFVRQGALIALAMVLVQQNDTQNPKAGAVRRLYEKVLKDKHEDSMARFGAIIGQGIIDAGGRNVTIALQSRTGHTSLQSVVGLLVFTQFWYWFPLTHFISLAFTPTAVIALNSDLKMPKLEFRSDAKPSLFAYPPPLQAQKEASKEKVAPAVLSFSARASKKASKKDDEKKEEKKDDKKEEKKDGAEPMDVDKAADEQKKKEPEPEFEMLANPARAVPQQLKHVTFASQRYVPVNKTEGLGGIVVVKNNSRDEPEELVEMTTNLKKVEAVGASTQVDEDEADPPEPFEWTD* # PASA_UPDATE: g14267.t1, single gene model update, valid-1, status:[pasa:asmbl_2331,status:3], valid-1 NODE_168_length_33751_cov_45.748 . gene 16782 18637 . + . ID=g14267;Name=g14267.t1 NODE_168_length_33751_cov_45.748 . mRNA 16782 18637 . + . ID=g14267.t1;Parent=g14267;Name=g14267.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 16782 16859 . + . ID=g14267.t1.utr5p1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . exon 16782 17068 . + . ID=g14267.t1.exon1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . CDS 16860 17068 . + 0 ID=cds.g14267.t1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . exon 17373 17529 . + . ID=g14267.t1.exon2;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . CDS 17373 17529 . + 1 ID=cds.g14267.t1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . exon 17636 17799 . + . ID=g14267.t1.exon3;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . CDS 17636 17799 . + 0 ID=cds.g14267.t1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . exon 18185 18272 . + . ID=g14267.t1.exon4;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . CDS 18185 18272 . + 1 ID=cds.g14267.t1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . exon 18451 18637 . + . ID=g14267.t1.exon5;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . CDS 18451 18513 . + 0 ID=cds.g14267.t1;Parent=g14267.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 18514 18637 . + . ID=g14267.t1.utr3p1;Parent=g14267.t1 #PROT g14267.t1 g14267 MALNDDDVAKQIQHMVAFIQQEAKEKANEILVKAEEEFNIEKGRLVQQERLKIIAAYDRKEKQVEVQKKIAYSNELNVARLQVLKARDEHLEKILAEAATRLATITRQSDRYKKLLEGLLSQCVFQLLEDKAIVRCRKVDISLVESVIPGVQQQLAKATGRNLQIIIDRENPLPEASAGGVEVSSANGRVRIANTLETRLHLVAQQMLPEIRTMLFGKSLTRTFFD* # PASA_UPDATE: g14265.t1, single gene model update, valid-1, status:[pasa:asmbl_2329,status:3], valid-1 NODE_168_length_33751_cov_45.748 . gene 6572 9335 . + . ID=g14265;Name=g14265.t1 NODE_168_length_33751_cov_45.748 . mRNA 6572 9335 . + . ID=g14265.t1;Parent=g14265;Name=g14265.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 6572 6848 . + . ID=g14265.t1.utr5p1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 6572 6912 . + . ID=g14265.t1.exon1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 6849 6912 . + 0 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 7047 7132 . + . ID=g14265.t1.exon2;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 7047 7132 . + 2 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 7247 7336 . + . ID=g14265.t1.exon3;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 7247 7336 . + 0 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 7605 7750 . + . ID=g14265.t1.exon4;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 7605 7750 . + 0 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 7958 8232 . + . ID=g14265.t1.exon5;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 7958 8232 . + 1 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 8445 8687 . + . ID=g14265.t1.exon6;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 8445 8687 . + 2 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . exon 8927 9335 . + . ID=g14265.t1.exon7;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . CDS 8927 9294 . + 2 ID=cds.g14265.t1;Parent=g14265.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 9295 9335 . + . ID=g14265.t1.utr3p1;Parent=g14265.t1 #PROT g14265.t1 g14265 MPPRQRLLSTSDEVVAVRAPIDKYGRIGMGIRDVLLQAQLAGVPLLVSIQSYRTPTKDLIMQLTSFLGTEEFYTPLVVFMLWLIDARLGRLFAVLLAIGFYIANSIKDFLCLPRPPLLNLVPLEKAQNWALPSHHALMGTILPWFVWIYLSTNGMLNETWAAVLFFVTIVWSSSVNFSRLYLAVHSPADIVTGIMLGIVVLGAWLASYSALDDYVGSDPSAPYVCVAVAVALIAIYPVSEPATTSYADCAATLGVAIGFIIGRSCIAAGDFPAPKALLESGGLRGLPWYLEFCVSLIRLAIGFAMVMITRSILKAVIFSTTVRVCRVFGRPYVRDTNKDIDARPVFTHYLQETYRAAPEDDATATANVGRDRARTSSASSPDLSKLRRSPVNLDIPVKFLSYAGMGWMAVQGVPRLYEYFWGF* # PASA_UPDATE: g14264.t1, single gene model update, valid-1, status:[pasa:asmbl_2334,status:12], valid-1 NODE_168_length_33751_cov_45.748 . gene 5179 6248 . - . ID=g14264;Name=g14264.t1 NODE_168_length_33751_cov_45.748 . mRNA 5179 6248 . - . ID=g14264.t1;Parent=g14264;Name=g14264.t1 NODE_168_length_33751_cov_45.748 . exon 6129 6248 . - . ID=g14264.t1.exon1;Parent=g14264.t1 NODE_168_length_33751_cov_45.748 . CDS 6129 6248 . - 0 ID=cds.g14264.t1;Parent=g14264.t1 NODE_168_length_33751_cov_45.748 . exon 5179 5832 . - . ID=g14264.t1.exon2;Parent=g14264.t1 NODE_168_length_33751_cov_45.748 . CDS 5332 5832 . - 0 ID=cds.g14264.t1;Parent=g14264.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 5179 5331 . - . ID=g14264.t1.utr3p1;Parent=g14264.t1 #PROT g14264.t1 g14264 MFSAVEVGDAQTQKGKSKHDYFTGRKESTKRQEKVPIVFKMVAALEVALYVAIVAASLVLPGFLAPKSRAGKGASSPTAPPSPLLRANILFGVTYYYSMATAHYFGFKYPLLFIFFDPPFFAYQDKIIAFCVIVYATFFMHAANNKAAVPAALTAYTVTILGLISVIVSADLDAVLNGASKSAYWTQTIAFSVHLAVLLGLQLREK* # PASA_UPDATE: g14266.t1, single gene model update, valid-1, status:[pasa:asmbl_2330,status:3], valid-1 NODE_168_length_33751_cov_45.748 . gene 9583 14853 . + . ID=g14266;Name=g14266.t1 NODE_168_length_33751_cov_45.748 . mRNA 9583 14853 . + . ID=g14266.t1;Parent=g14266;Name=g14266.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 9583 9826 . + . ID=g14266.t1.utr5p1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 9583 9895 . + . ID=g14266.t1.exon1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 9827 9895 . + 0 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 10147 10265 . + . ID=g14266.t1.exon2;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 10147 10265 . + 0 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 10417 10508 . + . ID=g14266.t1.exon3;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 10417 10508 . + 1 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 10715 10824 . + . ID=g14266.t1.exon4;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 10715 10824 . + 2 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 11286 11387 . + . ID=g14266.t1.exon5;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 11286 11387 . + 0 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 11600 11729 . + . ID=g14266.t1.exon6;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 11600 11729 . + 0 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 11932 12271 . + . ID=g14266.t1.exon7;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 11932 12271 . + 2 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 12634 12948 . + . ID=g14266.t1.exon8;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 12634 12948 . + 1 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 13155 13465 . + . ID=g14266.t1.exon9;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 13155 13465 . + 1 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 13687 13855 . + . ID=g14266.t1.exon10;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 13687 13855 . + 2 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 14085 14178 . + . ID=g14266.t1.exon11;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 14085 14178 . + 1 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . exon 14556 14853 . + . ID=g14266.t1.exon12;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . CDS 14556 14609 . + 0 ID=cds.g14266.t1;Parent=g14266.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 14610 14853 . + . ID=g14266.t1.utr3p1;Parent=g14266.t1 #PROT g14266.t1 g14266 MSDVSKAEATAIFKKLSAKADNKHCFDCEAKNPTWASPKYGIFICIDCAATHRSLGVHLSFVRSTQLDSWTIPQLRSMQLGGNAAAADFFRMHGCTVKDATAKYSSRAAQLYKDKLATLVAQEEKRQGDKFEVGSPPKPEKLEIDFFDAAAHASPAGPRSLTPQASSAPAPAPAPAPAPARSDAESPVGPTDAATKSAAAVSTIGKRTGGMGVRKTGGLGAKRVEKTNFAEVESKAKEEDDARTKGALAVNTPSPSTQPSSDLKQPLNLEEAVADSISGRLAYGTSTAPKKPLNADQQKNMERLGMGMGRLGVADNQKGAGIGHSASASMTVVQQEKVEAPTSFYGNSGRGGDRDSYDVYGSSTYGRSSNDDLYGSRDYYGGAQGGGARGGGDPYSMAGMGRYGSGSGMGGMGGQREADSFFDADRYGGSRSGGLSASSSDRFDKPLSLGMQPSSNERFSSQGSGSGNTAFGSSNYGTSSYGSSNYGSSGFGSTGTKDAWSSGSGLGSGSGSGSGYGSGVRASPAPAAADETATKKFGNAKAISSDAYFGRDKEDDFEKQEKLQRFSNSTGISSDMYFNNGNGADRRNNSSSGGRFSQQASSDFDILKQGATNIAGKLSNFASTVISDIQDRYS* # ORIGINAL: g14268.t1 original gene structure, not modified by PASA NODE_168_length_33751_cov_45.748 AUGUSTUS gene 19058 20116 . + . ID=g14268;Name=g14268.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS mRNA 19058 20116 . + . ID=g14268.t1;Parent=g14268;Name=g14268.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 19058 19481 . + . ID=g14268.t1.exon1;Parent=g14268.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 19058 19481 . + 0 ID=cds.g14268.t1;Parent=g14268.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 19662 20116 . + . ID=g14268.t1.exon2;Parent=g14268.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 19662 20116 . + 2 ID=cds.g14268.t1;Parent=g14268.t1 #PROT g14268.t1 g14268 MLSSNKQGRIAAVLLDLSGTLHIGDEATQGAHAALAKLRAEGGISVRFVSNTTKESRRALLRRLNGRLAFGIDEGHLFTSLSASASFARARGIRPLLLLSDDAMCEFDGLDTADPNAVFIGLAPERMTYDNLNCAFQLLRQGSPLVALHRGRYHATSPASVSLGPGAFVAALEFAAGVSATLIGKPSPAFFDAVLADCGCERANAVMIGDDAQDDVKGAADAGLGGLLVRTGKYTAGDELRAGVDRSLVFDSVEGAVDAVLRHNEAVRAAASECGSAPASCCDAGVGGTTTK* # PASA_UPDATE: g14269.t1, single gene model update, valid-1, status:[pasa:asmbl_2336,status:3], valid-1 # PASA_UPDATE: g14269.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2335,status:3], valid-1 NODE_168_length_33751_cov_45.748 . gene 20138 26544 . - . ID=g14269;Name=g14269.t1 NODE_168_length_33751_cov_45.748 . mRNA 20138 26544 . - . ID=g14269.t1;Parent=g14269;Name=g14269.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 26416 26544 . - . ID=g14269.t1.utr5p1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 26341 26544 . - . ID=g14269.t1.exon1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 26341 26415 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 26094 26246 . - . ID=g14269.t1.exon2;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 26094 26246 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 25734 25948 . - . ID=g14269.t1.exon3;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 25734 25948 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 25467 25548 . - . ID=g14269.t1.exon4;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 25467 25548 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 25274 25349 . - . ID=g14269.t1.exon5;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 25274 25349 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 24996 25144 . - . ID=g14269.t1.exon6;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 24996 25144 . - 2 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 24852 24909 . - . ID=g14269.t1.exon7;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 24852 24909 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 24582 24738 . - . ID=g14269.t1.exon8;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 24582 24738 . - 2 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 24317 24407 . - . ID=g14269.t1.exon9;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 24317 24407 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 24121 24212 . - . ID=g14269.t1.exon10;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 24121 24212 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 23872 24004 . - . ID=g14269.t1.exon11;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 23872 24004 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 23642 23724 . - . ID=g14269.t1.exon12;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 23642 23724 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 23431 23541 . - . ID=g14269.t1.exon13;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 23431 23541 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 23192 23264 . - . ID=g14269.t1.exon14;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 23192 23264 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 22914 23055 . - . ID=g14269.t1.exon15;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 22914 23055 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 22697 22809 . - . ID=g14269.t1.exon16;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 22697 22809 . - 2 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 22392 22580 . - . ID=g14269.t1.exon17;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 22392 22580 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 22096 22240 . - . ID=g14269.t1.exon18;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 22096 22240 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 21794 21920 . - . ID=g14269.t1.exon19;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 21794 21920 . - 2 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 21569 21638 . - . ID=g14269.t1.exon20;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 21569 21638 . - 1 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 21306 21413 . - . ID=g14269.t1.exon21;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 21306 21413 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 21090 21137 . - . ID=g14269.t1.exon22;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 21090 21137 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 20814 20966 . - . ID=g14269.t1.exon23;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 20814 20966 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 20586 20630 . - . ID=g14269.t1.exon24;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 20586 20630 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . exon 20138 20419 . - . ID=g14269.t1.exon25;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . CDS 20291 20419 . - 0 ID=cds.g14269.t1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 20138 20290 . - . ID=g14269.t1.utr3p1;Parent=g14269.t1 NODE_168_length_33751_cov_45.748 . mRNA 20138 26544 . - . ID=g14269.t1.1.5b6be70a;Parent=g14269;Name=g14269.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 26416 26544 . - . ID=g14269.t1.1.5b6be70a.utr5p1;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 26341 26544 . - . ID=g14269.t1.1.5b6be70a.exon1;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 26341 26415 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 26094 26246 . - . ID=g14269.t1.1.5b6be70a.exon2;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 26094 26246 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 25734 25948 . - . ID=g14269.t1.1.5b6be70a.exon3;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 25734 25948 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 25467 25548 . - . ID=g14269.t1.1.5b6be70a.exon4;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 25467 25548 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 25274 25349 . - . ID=g14269.t1.1.5b6be70a.exon5;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 25274 25349 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 24996 25144 . - . ID=g14269.t1.1.5b6be70a.exon6;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 24996 25144 . - 2 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 24852 24909 . - . ID=g14269.t1.1.5b6be70a.exon7;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 24852 24909 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 24582 24738 . - . ID=g14269.t1.1.5b6be70a.exon8;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 24582 24738 . - 2 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 24317 24407 . - . ID=g14269.t1.1.5b6be70a.exon9;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 24317 24407 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 24121 24212 . - . ID=g14269.t1.1.5b6be70a.exon10;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 24121 24212 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 23872 24004 . - . ID=g14269.t1.1.5b6be70a.exon11;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 23872 24004 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 23642 23724 . - . ID=g14269.t1.1.5b6be70a.exon12;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 23642 23724 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 23431 23541 . - . ID=g14269.t1.1.5b6be70a.exon13;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 23431 23541 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 23192 23264 . - . ID=g14269.t1.1.5b6be70a.exon14;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 23192 23264 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 22914 23055 . - . ID=g14269.t1.1.5b6be70a.exon15;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 22914 23055 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 22697 22809 . - . ID=g14269.t1.1.5b6be70a.exon16;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 22697 22809 . - 2 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 22392 22580 . - . ID=g14269.t1.1.5b6be70a.exon17;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 22392 22580 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 22096 22240 . - . ID=g14269.t1.1.5b6be70a.exon18;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 22096 22240 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 21794 21920 . - . ID=g14269.t1.1.5b6be70a.exon19;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 21794 21920 . - 2 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 21569 21638 . - . ID=g14269.t1.1.5b6be70a.exon20;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 21569 21638 . - 1 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 21306 21413 . - . ID=g14269.t1.1.5b6be70a.exon21;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 21306 21413 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 20814 21137 . - . ID=g14269.t1.1.5b6be70a.exon22;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . CDS 21057 21137 . - 0 ID=cds.g14269.t1.1.5b6be70a;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 20586 20630 . - . ID=g14269.t1.1.5b6be70a.exon23;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . exon 20138 20419 . - . ID=g14269.t1.1.5b6be70a.exon24;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . three_prime_UTR 20814 21056 . - . ID=g14269.t1.1.5b6be70a.utr3p1;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . three_prime_UTR 20586 20630 . - . ID=g14269.t1.1.5b6be70a.utr3p2;Parent=g14269.t1.1.5b6be70a NODE_168_length_33751_cov_45.748 . three_prime_UTR 20138 20419 . - . ID=g14269.t1.1.5b6be70a.utr3p3;Parent=g14269.t1.1.5b6be70a #PROT g14269.t1 g14269 MASQGAAPSVAAAAPKPKNKASVKQVLSGDTIVLRGKPTNGPPPERTLSFAHISAPRLARRPNDGETATGESAKDEPFAWECREYLRKRLVGKDVKFTVEYAVPSGREFGTVWIDSAANGTSENIVASLVKEGLAKVRPVSGNHQRTEEYEELVAVEAEAQAAGKGVWAKDAPASAVRSVVWNVDNSRTILDQFQGKPTDAIIEQVRDGTTVRAFLLPSFQYITVSMSGVKSPSVRREDGKEVAEPFALEARYFTEVRLLQREVKILLEGVSSQSQNTFLGSILHPAGSISEALVREGLAKCVDWSMAVVSQGREKLRAAEKEAKQKKLRIWKNFVAAEAGSEIKEKEFVAKVVEIVNAETLMVRVAPGDVRRISLSSIRQPKALSAKDEEGAAGKRPAGNRQQQLFDVPYLFEAREFLRKKLIGKKVKVEVDYVKPASDGFPERIAATVTMDGVNISEALVSKGYATVLRHRADDEQRSKKYDELLVAENRAQKGQKGVHSPKEPPKYKVPDASEDLKKARERLPFLQRAGRTPAVVEYVASGSRLRLFLPKETCYLTFLLSGIKCPRASIRTGADAGQKGEPYGDEALEFTRDRAFQRDVDVEVETIDNRGGFVGTVYIDGESLAVGLVEQGFAFVFGSLEKTPNARELKASEERARAKLLGVWKDYKEEPVEDTKAEAADESDRKVDLVEVGVTDVIDGVTFWAQPAASSAKLNELMGALAEHFEAHPPLPGSYSPKTGDLVAALFSADETWYRARVQKVVSAGDVHVHYVDFGNSEAVPSTSLAILPSQYHSLPAQAVEYKLAFVSPPMDEEWAFEAANLLRDLILNKTLKINVEYKKDNKTHVTALEDGAGDITRVVLAEGLGLLERRRERRFASLIQDYAAAQDSAKAARLSMWQYGDLTADDAKEFGFKPREKATDPKPTAAPAAAKAGKK* #PROT g14269.t1.1.5b6be70a g14269 MASQGAAPSVAAAAPKPKNKASVKQVLSGDTIVLRGKPTNGPPPERTLSFAHISAPRLARRPNDGETATGESAKDEPFAWECREYLRKRLVGKDVKFTVEYAVPSGREFGTVWIDSAANGTSENIVASLVKEGLAKVRPVSGNHQRTEEYEELVAVEAEAQAAGKGVWAKDAPASAVRSVVWNVDNSRTILDQFQGKPTDAIIEQVRDGTTVRAFLLPSFQYITVSMSGVKSPSVRREDGKEVAEPFALEARYFTEVRLLQREVKILLEGVSSQSQNTFLGSILHPAGSISEALVREGLAKCVDWSMAVVSQGREKLRAAEKEAKQKKLRIWKNFVAAEAGSEIKEKEFVAKVVEIVNAETLMVRVAPGDVRRISLSSIRQPKALSAKDEEGAAGKRPAGNRQQQLFDVPYLFEAREFLRKKLIGKKVKVEVDYVKPASDGFPERIAATVTMDGVNISEALVSKGYATVLRHRADDEQRSKKYDELLVAENRAQKGQKGVHSPKEPPKYKVPDASEDLKKARERLPFLQRAGRTPAVVEYVASGSRLRLFLPKETCYLTFLLSGIKCPRASIRTGADAGQKGEPYGDEALEFTRDRAFQRDVDVEVETIDNRGGFVGTVYIDGESLAVGLVEQGFAFVFGSLEKTPNARELKASEERARAKLLGVWKDYKEEPVEDTKAEAADESDRKVDLVEVGVTDVIDGVTFWAQPAASSAKLNELMGALAEHFEAHPPLPGSYSPKTGDLVAALFSADETWYRARVQKVVSAGDVHVHYVDFGNSEAVPSTSLAILPSQYHSLPAQAVEYKLAFVSPPMDEEWAFEAANLLRDLILVRIACMHFDE* # ORIGINAL: g14263.t1 original gene structure, not modified by PASA NODE_168_length_33751_cov_45.748 AUGUSTUS gene 13 3956 . - . ID=g14263;Name=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS mRNA 13 3956 . - . ID=g14263.t1;Parent=g14263;Name=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 3858 3956 . - . ID=g14263.t1.exon1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 3858 3956 . - 0 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 3485 3558 . - . ID=g14263.t1.exon2;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 3485 3558 . - 0 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 2867 3301 . - . ID=g14263.t1.exon3;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 2867 3301 . - 1 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 2386 2493 . - . ID=g14263.t1.exon4;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 2386 2493 . - 1 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 1806 1927 . - . ID=g14263.t1.exon5;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 1806 1927 . - 1 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 1417 1536 . - . ID=g14263.t1.exon6;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 1417 1536 . - 2 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 843 946 . - . ID=g14263.t1.exon7;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 843 946 . - 2 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 353 631 . - . ID=g14263.t1.exon8;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 353 631 . - 0 ID=cds.g14263.t1;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 13 189 . - . ID=g14263.t1.exon9;Parent=g14263.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 13 189 . - 0 ID=cds.g14263.t1;Parent=g14263.t1 #PROT g14263.t1 g14263 MDDWEEAGVTPPDKDVDENIDEVNSERSITGFKTAEEIEKLTVDEQLDDVERIMVLLRSGNVVQQASAIEMIPECLKDSREGSIAKILPRLKELVETGSAPLQRVACHCLEDIGERKLLTSAEYASLVLPSIVKKCEQRESADVNRAWLEALLKGIPCLTREVIKSDLLDFTIAKGHMSKPVQSRLGCCRLLGAISAKLDADSMSKDFFQKISSLCQDTDYDVRVAMCMHLDSIARGAGLENTKKTLIPELVELTNDEEVVVRLASFQCIVDLITFLDKATLVEVVVPIVCRFVESAHETEGATMHVASLFGKIFHRLHHLLNEHQTTMFLDFYRSLATHPSSECHRHCAYNMPAVILVMGASRYPSELHSTFSLLVQDFDMRVRKIIASAFHEFASIMPGDVAARYFKTSLSQLLEDKSSEVIAALLEKLNETFANFAHRMDEDRKHTVFLELLSSLLSCEGNVRNKWRLQETIMQRFKCLPDYLPSDTIYAKIVPIVFQYMGPQ # ORIGINAL: g14272.t1 original gene structure, not modified by PASA NODE_168_length_33751_cov_45.748 AUGUSTUS gene 30047 30988 . + . ID=g14272;Name=g14272.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS mRNA 30047 30988 . + . ID=g14272.t1;Parent=g14272;Name=g14272.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS exon 30047 30988 . + . ID=g14272.t1.exon1;Parent=g14272.t1 NODE_168_length_33751_cov_45.748 AUGUSTUS CDS 30047 30988 . + 0 ID=cds.g14272.t1;Parent=g14272.t1 #PROT g14272.t1 g14272 MRFWLPLTMHLEWLITNGLPCYRSIEAHIFRSPTGVRPRGVVVISGATAVSQKYYSSFASHLAGAGFEAVTYDYRGIGASRPSLANNGGDIPMSRFAGSMRDWAYLDYPAVMAHVDGNERWRGLPVFIVCHSFGGQALAIADYPSRARVRGAVVVASQKGDVRLWGLSDRLRLMLQTYVLLPLIARTMGYVPGWILGEDLPGPVAREWASWIRSRDYVFGVHPQTSSVAASFKAPLLSYEATDDSYASHDAVTGILNEFKSASIERRVLRPADYGMKEIGHFEFFRKRSADKFWKGVVDWLELQASSGPKSKL* # PASA_UPDATE: g14271.t1, single gene model update, valid-1, status:[pasa:asmbl_2337,status:12], valid-1 NODE_168_length_33751_cov_45.748 . gene 28450 29249 . - . ID=g14271;Name=g14271.t1 NODE_168_length_33751_cov_45.748 . mRNA 28450 29249 . - . ID=g14271.t1;Parent=g14271;Name=g14271.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 29149 29249 . - . ID=g14271.t1.utr5p1;Parent=g14271.t1 NODE_168_length_33751_cov_45.748 . exon 28758 29249 . - . ID=g14271.t1.exon1;Parent=g14271.t1 NODE_168_length_33751_cov_45.748 . CDS 28758 29148 . - 0 ID=cds.g14271.t1;Parent=g14271.t1 NODE_168_length_33751_cov_45.748 . exon 28450 28658 . - . ID=g14271.t1.exon2;Parent=g14271.t1 NODE_168_length_33751_cov_45.748 . CDS 28561 28658 . - 2 ID=cds.g14271.t1;Parent=g14271.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 28450 28560 . - . ID=g14271.t1.utr3p1;Parent=g14271.t1 #PROT g14271.t1 g14271 MSDKPLASAPAPPYTPGLAGYPPQQGQPGQQGYAYPPSSQQQGQYPPPGYQQSEGYQGGYQNQPYAQQQGYPPQQGYPPQAYPPQGYGPQPSYNTTVVTTQAAASPPVVVVSGGCPVCKVGVMVDDYTCCGVCLGIVFFPIGILCCLAMTKKTCTNCGASFG* # PASA_UPDATE: g14270.t1, single gene model update, valid-1, status:[pasa:asmbl_2332,status:3], valid-1 NODE_168_length_33751_cov_45.748 . gene 27002 28471 . + . ID=g14270;Name=g14270.t1 NODE_168_length_33751_cov_45.748 . mRNA 27002 28471 . + . ID=g14270.t1;Parent=g14270;Name=g14270.t1 NODE_168_length_33751_cov_45.748 . five_prime_UTR 27002 27304 . + . ID=g14270.t1.utr5p1;Parent=g14270.t1 NODE_168_length_33751_cov_45.748 . exon 27002 27355 . + . ID=g14270.t1.exon1;Parent=g14270.t1 NODE_168_length_33751_cov_45.748 . CDS 27305 27355 . + 0 ID=cds.g14270.t1;Parent=g14270.t1 NODE_168_length_33751_cov_45.748 . exon 27527 28471 . + . ID=g14270.t1.exon2;Parent=g14270.t1 NODE_168_length_33751_cov_45.748 . CDS 27527 28414 . + 0 ID=cds.g14270.t1;Parent=g14270.t1 NODE_168_length_33751_cov_45.748 . three_prime_UTR 28415 28471 . + . ID=g14270.t1.utr3p1;Parent=g14270.t1 #PROT g14270.t1 g14270 MASAASHHKVKAETALQLFTHNETSKPVSPLGILPIDNAFPNGIPAQSTIELQGQSCSGKTQLLLAVVCQFVLSPPAGHGLSALLFDLDARFDVVSFSAMLMQRARVHLLQAHAPTNRGSEGPLGRTQGDSDVESEASAMTRSALARLSVVRCWTLEEAVVTLHSAVNMASANPSLRLLALDGAANFYWHERAAGGGGADELAAAVAHATQSANLVAIATVSSLMGRGRTGFMGRAWSALFRHRFLLDVAAVQPTPSRASRQQQPHPTNGQSGVMAADNTERPTRIVVNAAYQGGRAQPYTFLICNNGIVFE* # ORIGINAL: g8833.t1 original gene structure, not modified by PASA NODE_4592_length_1423_cov_33.4733 AUGUSTUS gene 209 1307 . + . ID=g8833;Name=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS mRNA 209 1307 . + . ID=g8833.t1;Parent=g8833;Name=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS exon 209 247 . + . ID=g8833.t1.exon1;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS CDS 209 247 . + 1 ID=cds.g8833.t1;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS exon 411 527 . + . ID=g8833.t1.exon2;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS CDS 411 527 . + 1 ID=cds.g8833.t1;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS exon 670 820 . + . ID=g8833.t1.exon3;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS CDS 670 820 . + 1 ID=cds.g8833.t1;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS exon 1026 1307 . + . ID=g8833.t1.exon4;Parent=g8833.t1 NODE_4592_length_1423_cov_33.4733 AUGUSTUS CDS 1026 1307 . + 0 ID=cds.g8833.t1;Parent=g8833.t1 #PROT g8833.t1 g8833 QGANPYRVLDQVKTKLRHNVAPLQMPMGLEDKTAGLIDLIGLKAYYYDGPYGDDVRIENIPEEYMDEAKQRRHDLVETVANVDDALGELFLSEVDPTEAELKAAIRRATIARKFTPMMMGTALKNKGIQTLLDGVVDYLPNPTEIQNHALDLANEEAKVLVDCSRKGDKPFIGLAFKLEESRFGQLTYLRIYQVG* # ORIGINAL: g2687.t1 original gene structure, not modified by PASA NODE_5231_length_959_cov_40.431_potentialcontaminant AUGUSTUS gene 494 959 . + . ID=g2687;Name=g2687.t1 NODE_5231_length_959_cov_40.431_potentialcontaminant AUGUSTUS mRNA 494 959 . + . ID=g2687.t1;Parent=g2687;Name=g2687.t1 NODE_5231_length_959_cov_40.431_potentialcontaminant AUGUSTUS exon 494 959 . + . ID=g2687.t1.exon1;Parent=g2687.t1 NODE_5231_length_959_cov_40.431_potentialcontaminant AUGUSTUS CDS 494 959 . + 0 ID=cds.g2687.t1;Parent=g2687.t1 #PROT g2687.t1 g2687 GRNLYNNIGSNHIKNIDNKNPDINNDHPHVNDDKTNVNHYISHVNDDWPNLNIDLHDHCIDHPPDFYINGNHISLNCLNADNHHSPPNEHHQWVNEHFNEPPIDYYCANNNNRRQRHNHLTGIDHDRPDHYHNGPPFNDNARFRNINPPPHNPKC # PASA_UPDATE: g5152.t1, single gene model update, valid-1, status:[pasa:asmbl_1016,status:3], valid-1 NODE_1267_length_12559_cov_50.6478 . gene 6012 7407 . - . ID=g5152;Name=g5152.t1 NODE_1267_length_12559_cov_50.6478 . mRNA 6012 7407 . - . ID=g5152.t1;Parent=g5152;Name=g5152.t1 NODE_1267_length_12559_cov_50.6478 . five_prime_UTR 7313 7407 . - . ID=g5152.t1.utr5p1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . exon 7219 7407 . - . ID=g5152.t1.exon1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . CDS 7219 7312 . - 0 ID=cds.g5152.t1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . exon 6879 7095 . - . ID=g5152.t1.exon2;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . CDS 6879 7095 . - 2 ID=cds.g5152.t1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . exon 6503 6617 . - . ID=g5152.t1.exon3;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . CDS 6503 6617 . - 1 ID=cds.g5152.t1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . exon 6012 6398 . - . ID=g5152.t1.exon4;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . CDS 6030 6398 . - 0 ID=cds.g5152.t1;Parent=g5152.t1 NODE_1267_length_12559_cov_50.6478 . three_prime_UTR 6012 6029 . - . ID=g5152.t1.utr3p1;Parent=g5152.t1 #PROT g5152.t1 g5152 MAPHPPFWGNVTATIDWCEENYVASPYIAEFWNTVSNMLMVFLALFGFKKFVDYGVERRFAMSYLALMTVGVGSTLFHGTLLYEMQLLDELPMIYGTCVFLYVLLEDERTPKYGWKLVFFLGLYSTVVTVVYLVLKKPIFHEVAYGILVAGVVFLCARMLRRHPTPALYRLFWFAFASYGFGFFLWNIDNNFCHHLRNTRDESHPAVAPVYQLHAWWHIFTGYATYLQIIFCLYYRMHILGKRPSIRFALGVPYVQSHFERKNQ* # PASA_UPDATE: g5154.t1, single gene model update, valid-1, status:[pasa:asmbl_1017,status:12], valid-1 NODE_1267_length_12559_cov_50.6478 . gene 10382 11257 . + . ID=g5154;Name=g5154.t1 NODE_1267_length_12559_cov_50.6478 . mRNA 10382 11257 . + . ID=g5154.t1;Parent=g5154;Name=g5154.t1 NODE_1267_length_12559_cov_50.6478 . exon 10382 10711 . + . ID=g5154.t1.exon1;Parent=g5154.t1 NODE_1267_length_12559_cov_50.6478 . CDS 10382 10711 . + 0 ID=cds.g5154.t1;Parent=g5154.t1 NODE_1267_length_12559_cov_50.6478 . exon 10970 11257 . + . ID=g5154.t1.exon2;Parent=g5154.t1 NODE_1267_length_12559_cov_50.6478 . CDS 10970 11161 . + 0 ID=cds.g5154.t1;Parent=g5154.t1 NODE_1267_length_12559_cov_50.6478 . three_prime_UTR 11162 11257 . + . ID=g5154.t1.utr3p1;Parent=g5154.t1 #PROT g5154.t1 g5154 MATHALLPLVRSLSAIQVRSCIHFSSRHPFRSDTTNLGGRAACAFHGNNVRYIVNKAQTHTLATNANATNKRRMTVTKLTAEERTVALAELKGWAEVDGRDAIHKKFSFKDFNEAFGFMTRVALRADKVDHHPEWFNVYNRVEITLSTHDCGGLSQRDVALAKFIDEAAAKLF* # ORIGINAL: g5151.t1 original gene structure, not modified by PASA NODE_1267_length_12559_cov_50.6478 AUGUSTUS gene 51 5095 . - . ID=g5151;Name=g5151.t1 NODE_1267_length_12559_cov_50.6478 AUGUSTUS mRNA 51 5095 . - . ID=g5151.t1;Parent=g5151;Name=g5151.t1 NODE_1267_length_12559_cov_50.6478 AUGUSTUS exon 1028 5095 . - . ID=g5151.t1.exon1;Parent=g5151.t1 NODE_1267_length_12559_cov_50.6478 AUGUSTUS CDS 1028 5095 . - 0 ID=cds.g5151.t1;Parent=g5151.t1 NODE_1267_length_12559_cov_50.6478 AUGUSTUS exon 51 857 . - . ID=g5151.t1.exon2;Parent=g5151.t1 NODE_1267_length_12559_cov_50.6478 AUGUSTUS CDS 51 857 . - 0 ID=cds.g5151.t1;Parent=g5151.t1 #PROT g5151.t1 g5151 MHTPGMTDTTHDHDQHSVRSMAGSLGRTESRTFGSANVLPSISRDVGASKASLSSSSSLQGQKLTGFGRSLHEIHHSTAMLASTGRLLQASQMSSSVAALGDLLSDDAFVESLNAFLSLPAFSRRTMYVKKLGIICDASSLVQAQLHLKEHRPGDATVVAAGFDWFEKERLPYFLVSDYFILFVLGQLLSVTRPDCESLRHRLGMAEFAHFLRRTSGERDFLFWVEAERYRLCACKKQRKIILDVICERFLADGAALELSGPARDKAAQVASTSSVPEMLRAVQEVSVENLVGYWLPRFLSDQAKIEEEEYAEDSRQEPLKKDASTVRQARIADGGARGIFSELQRHTQSTYAFATMTPDSRRQPSSTAVSASHSHGRTSSRHRQRPPSSLAGSVNTAHFDHHSQQLLSYPRAPPSARRHTARMRSPLKSPGKMPRLPRLSSRKSSRSSAVARGIAQTIAFLTRLLPVGQDRATALIPQLSSDATAGGPLYSYIQRKCTEEDEAAASASAVLGLRCESLDDYSESMGVMPDPPRIAANCMLFWSELERYYDRPMDDPDGLIRMSRNMYCRYLAGGAVSSIAFDGFYGPSGLDRLMEAHPATRFDSACAHALRILAAQRDEYVARDETEWESRSSTVKLLRPKIPFGFGSRLNPSGRAGSRAGSRASLEHGSSHSILEESIGGGTRKKHRRRKHDGHLHSVSKLGIMETEHGQSMERIASAKSTYHEDADKAVGGAPAVTAGAEVVEAPHAADNNNGEQAAAVAATPDAQGAATTTDTKTPEEVHAPLPVVEATTTAHVEESLTAEASSVAKPSKECLLPIANEGATDPQPPVALTAPETAPTKRHRHSIRCSIHGGSASYAALEAYSKGHADQASRRAMSETPTALLRAHTGEESDGGLRSRSWKEVTAEGAIDPSISLPLTFGMPEDPADGATVGEITTAAAEFGSVDFTVSGDSRESSTSAVLAKSSAEGVLGDAIGREVGELSNAARRGSIMVRDTESQQLAHIRSPDPNAGDGPEVDGRRHSVVVVQQPINVHAVRRASRARKASVERGETAVADKPYGMYAHSSGQLRAEPEEESDADVGAGETDDGEDGVAVSNSRGDVAASGSQEAGAIVSAQEAMPVRRASKFKRTSSIAESASTAYAEKPFGMYARRDGVLSASEEKLPAEAECTCGHSDEEGGYSTGSSESESGSGSSSDSSDEDEDEGPGLTLESALEDLTELLQPANDPAIAAAAGFASAESLLFAARARKKPPAAKPAAPSKETFDAFKDVEVEKPAMEKDMHRERVLKTIEHALPHPKDARIDPSMLPNARMFMFKHPSEQDLKKATEGRQQRAGPRVAFKSDNPRLRAKIRNMWRFSIRCVLNCRAALMLDKGTSRFRDFVRESGLVLETEFEFWQEVERYKFIKTCNWDVLVGLKILAIFDCFLESVVPPAVQINISEEIFRDMAARRYVRPKSLFGRAQTLIFDRLLQLWPPYSRYDNDLAARKEEAAAKRALKALPLLKPRREGGPRPRGAAPFVRPADVADLQDLFLHLHKLPLSLRPVGPHVMTKEGININDVGKIRPPGGKKGGARSRKNSNARQAPRASIPDAASLAAAIATLPPIAGRMDGAPRAAAGGQK* # PASA_UPDATE: g5155.t1, single gene model update, valid-1, status:[pasa:asmbl_1019,status:12], valid-1 NODE_1267_length_12559_cov_50.6478 . gene 11258 12197 . - . ID=g5155;Name=g5155.t1 NODE_1267_length_12559_cov_50.6478 . mRNA 11258 12197 . - . ID=g5155.t1;Parent=g5155;Name=g5155.t1 NODE_1267_length_12559_cov_50.6478 . exon 12119 12197 . - . ID=g5155.t1.exon1;Parent=g5155.t1 NODE_1267_length_12559_cov_50.6478 . CDS 12119 12197 . - 0 ID=cds.g5155.t1;Parent=g5155.t1 NODE_1267_length_12559_cov_50.6478 . exon 11258 11774 . - . ID=g5155.t1.exon2;Parent=g5155.t1 NODE_1267_length_12559_cov_50.6478 . CDS 11467 11774 . - 2 ID=cds.g5155.t1;Parent=g5155.t1 NODE_1267_length_12559_cov_50.6478 . three_prime_UTR 11258 11466 . - . ID=g5155.t1.utr3p1;Parent=g5155.t1 #PROT g5155.t1 g5155 MNPEHNYANYRDVILQTRRKGCVAFLGLHLKDLTFINDGNPSKIDGRVNFEKMFLLYDTVTTLQRLKRHPYTLQRDEGLLRYCSSLVAIDDKTLYKYSLLCEPRGEKEGNVRLIEKWISEQKQGQQRG* # PASA_UPDATE: g5153.t1, single gene model update, valid-1, status:[pasa:asmbl_1018,status:12], valid-1 NODE_1267_length_12559_cov_50.6478 . gene 7904 10219 . + . ID=g5153;Name=g5153.t1 NODE_1267_length_12559_cov_50.6478 . mRNA 7904 10219 . + . ID=g5153.t1;Parent=g5153;Name=g5153.t1 NODE_1267_length_12559_cov_50.6478 . exon 7904 8071 . + . ID=g5153.t1.exon1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . CDS 7904 8071 . + 0 ID=cds.g5153.t1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . exon 8249 8286 . + . ID=g5153.t1.exon2;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . CDS 8249 8286 . + 0 ID=cds.g5153.t1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . exon 8397 8578 . + . ID=g5153.t1.exon3;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . CDS 8397 8578 . + 1 ID=cds.g5153.t1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . exon 8781 9139 . + . ID=g5153.t1.exon4;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . CDS 8781 9139 . + 2 ID=cds.g5153.t1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . exon 9349 10219 . + . ID=g5153.t1.exon5;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . CDS 9349 10131 . + 0 ID=cds.g5153.t1;Parent=g5153.t1 NODE_1267_length_12559_cov_50.6478 . three_prime_UTR 10132 10219 . + . ID=g5153.t1.utr3p1;Parent=g5153.t1 #PROT g5153.t1 g5153 MFELEVLCALTQWACGLFVSVCRVVLDVILAALASDVVRAAVACLVLGKLAHDYMRNAPASTARRKPPRIPGAIAPQKRRSLLGNGNDHGDANNSHRSLSWYERMLKSKDAVIASLVEQLGGQESTACAAESVTGESSACHDTNRDITASSVSTASLRSNAAAVHLPPSVVNTDVHAHPVVSPQASQSEAVQLPDDGVAIEGYLGRKRTRDVGGRDIASGPRRKWTRHWFIVRCGILFAYAERPTYKSQKIQAPLQLFGVTVRLIPSYKKRGDVISLSCIDGSEIYLRADDSETMSIWSSALHLASRMPTPSVAYASATNATTDTNDPTMPPARSTTPRRNRMSLPANLFSPPDADEDTDTSSAYVRSTWHAGNDPSSRDSRSHSATNGSPGVISGALVARPKRQSLDYAPYSSPTNPTLAIPGFGGHALAVGRVEETDEFISAAEVAAAKRAAYASLRRHIQELKGEVGSMRDELVSVGAYAKATYAGVVDIAADNVSASAIANSPDI* # PASA_UPDATE: g1807.t1, single gene model update, valid-1, status:[pasa:asmbl_2354,status:3], valid-1 NODE_1698_length_9656_cov_40.5202 . gene 3806 8640 . - . ID=g1807;Name=g1807.t1 NODE_1698_length_9656_cov_40.5202 . mRNA 3806 8640 . - . ID=g1807.t1;Parent=g1807;Name=g1807.t1 NODE_1698_length_9656_cov_40.5202 . five_prime_UTR 8534 8640 . - . ID=g1807.t1.utr5p1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 8526 8640 . - . ID=g1807.t1.exon1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 8526 8533 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 8244 8355 . - . ID=g1807.t1.exon2;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 8244 8355 . - 1 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 7920 8094 . - . ID=g1807.t1.exon3;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 7920 8094 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 7573 7710 . - . ID=g1807.t1.exon4;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 7573 7710 . - 2 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 7371 7438 . - . ID=g1807.t1.exon5;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 7371 7438 . - 2 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 7096 7221 . - . ID=g1807.t1.exon6;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 7096 7221 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 6667 6786 . - . ID=g1807.t1.exon7;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 6667 6786 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 6157 6345 . - . ID=g1807.t1.exon8;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 6157 6345 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 5741 5844 . - . ID=g1807.t1.exon9;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 5741 5844 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 5268 5385 . - . ID=g1807.t1.exon10;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 5268 5385 . - 1 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 4793 4912 . - . ID=g1807.t1.exon11;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 4793 4912 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 4504 4620 . - . ID=g1807.t1.exon12;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 4504 4620 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . exon 3806 4201 . - . ID=g1807.t1.exon13;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . CDS 4046 4201 . - 0 ID=cds.g1807.t1;Parent=g1807.t1 NODE_1698_length_9656_cov_40.5202 . three_prime_UTR 3806 4045 . - . ID=g1807.t1.utr3p1;Parent=g1807.t1 #PROT g1807.t1 g1807 MARHALLAFALTALLGAACMPGARADDPQPPGFEIFLTSNGANYAMATAVPVVLQRIVTTPIPDEAISVGTSVGSFNVYLSNTGVVSITVGGQSVNLAGSITLTSVAIHVGANWRYRKNSFPNIKDSGYVDLYGTLNVNIVVAPGITADGHASIGVTSCVAQFIDFKPDFHAGGTSWIYDLFKGPLSDAISSKLQSLICDAASSTLPEEANKVLAKVPVVEEFGSVASVDFRMLAAPQLLGPYARSTHKGEFFSTSKPVEAPFPIVPLPGDIPASDRMLYAYIGEYVLQSAGFAFYTSGELEHVVHATEIPKSSPVQLNTSSFIEAIPELYKSCSDCEMALRIAASSYPSISVTADGIAVVVVSSVDVMTKASATAPFTTAFTLNATFEANGTASLFVDANGGNRVGGHLTLLTLDLEMLQSEIGPVDLGSIKGLVSLALSQVALPAANKRLAVGFALPSIPNIQLANVLVSYYDHYFAIETDMHYSAPAIFTLVNKDRLVPVEAEAEALREVSEQ* # ORIGINAL: g1806.t1 original gene structure, not modified by PASA NODE_1698_length_9656_cov_40.5202 AUGUSTUS gene 197 2430 . - . ID=g1806;Name=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS mRNA 197 2430 . - . ID=g1806.t1;Parent=g1806;Name=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 2399 2430 . - . ID=g1806.t1.exon1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 2399 2430 . - 0 ID=cds.g1806.t1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 1872 1975 . - . ID=g1806.t1.exon2;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 1872 1975 . - 1 ID=cds.g1806.t1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 1476 1642 . - . ID=g1806.t1.exon3;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 1476 1642 . - 2 ID=cds.g1806.t1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 1047 1218 . - . ID=g1806.t1.exon4;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 1047 1218 . - 0 ID=cds.g1806.t1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 669 816 . - . ID=g1806.t1.exon5;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 669 816 . - 2 ID=cds.g1806.t1;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS exon 197 275 . - . ID=g1806.t1.exon6;Parent=g1806.t1 NODE_1698_length_9656_cov_40.5202 AUGUSTUS CDS 197 275 . - 1 ID=cds.g1806.t1;Parent=g1806.t1 #PROT g1806.t1 g1806 MLRVDADFAWIGVDIEGTLPPARCDHVAGSYNGTMYIYGGYTEDDGPLGDLWAFEVSARRWTQVSVTGGVPRTRTASSAVMMGSKFFVFGGMHSEDDLFNELIYIDIATPNPQWVTTATTGDVPPGTTWATATKVVNDGFLLFGGVQGLHSSHAMYLLNATTWEWTRLAHNCNGSAYLPPRMEKPVDYKAKTPNNQESLAQFAMELAAGESDLAQISSNISAIKGNITQQAQL* # ORIGINAL: g2591.t1 original gene structure, not modified by PASA NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS gene 4829 7775 . - . ID=g2591;Name=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS mRNA 4829 7775 . - . ID=g2591.t1;Parent=g2591;Name=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 6633 7775 . - . ID=g2591.t1.exon1;Parent=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 6633 7775 . - 0 ID=cds.g2591.t1;Parent=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 5404 6419 . - . ID=g2591.t1.exon2;Parent=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 5404 6419 . - 0 ID=cds.g2591.t1;Parent=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 4829 5249 . - . ID=g2591.t1.exon3;Parent=g2591.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 4829 5249 . - 1 ID=cds.g2591.t1;Parent=g2591.t1 #PROT g2591.t1 g2591 MSTESTKVVLNLPNDMTLGSEGSFMSEGSVPVVGLPVQGYYESRLLTTAASQAPYAPQPLQTALVIGASGVGKTPLLNLLIKGVSPVGEYQRDNDTAGPWCTMTVVGDAKSRTVTIPKSRAALTVPIPSVEMFLGTVEKCKKLQEIRRGPDAGVPARRGPLPVGSSMPTATSASPSHALIGATQLSLVLRLVSVDFATEHIVGQDSTGTALVKLARKLSGDKNLRPLDCIAALSLAGMEVVFKPNTGNHERDRAASYDLLDAIATGDVGLGPLLQLVEVHVPCREDALPLFSGRAIPFGLQELMGSYRDGSYREAALCRYQHTKHDVVVLVTKLGKVEEALVHDAADIITRLVTQAPPLQLVLAAHNTGGYSDAVAIKSAKAYFVQLIRLIALAERQNAQKEGAKKESALSSMCSHKRAEQKAESLFAAGVVRVFSFHPEGPADRATAAVFGAVRAAQRTRAKTVIDLLRGIRGDLSAAHGLSDACAAALAAVETSLSEIDAEARFTQMGRTVADAGLARLEARRVVVRPGTDAHKKALRESDIARRDGKPLAGAARVVASTSGQFGSGAGRVLRENRLFGLAVDPVVLSDAPTEAAHEIHAVAARLLADFGDELVDRLNNTAASGYVIHEFRARTRAFCSVIGGIRGDDVSFAVRAGAHAPLVEVAKAYRSLKSGSETKTVAGIALITKGVDGVRMEANASAMTAVAQVLVMALKELFGPLFTGGLPLLAEKGLTTLRQMDKAIESLAAEIAEIDLWVSSARIVVAPTNANANATRAVARQELRHARLGRARDRSTSAVASTDEMVTAVESPRGRAELRGFRRDTLHRFAQEVKRAQLRGGETKEDIIRAIYAPGGRQ* # ORIGINAL: g2589.t1 original gene structure, not modified by PASA NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS gene 2 805 . + . ID=g2589;Name=g2589.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS mRNA 2 805 . + . ID=g2589.t1;Parent=g2589;Name=g2589.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 2 805 . + . ID=g2589.t1.exon1;Parent=g2589.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 2 805 . + 0 ID=cds.g2589.t1;Parent=g2589.t1 #PROT g2589.t1 g2589 IQQRVGCYAIDSYIGKSENKSVYTLDHILHQLQMVPLVESLQVLGLKVAINVTAAANGEKLRRVTTSDMTFLSDDNQPIENPYSREHPIEILQLKRGTNLSLMVDTKFGIPNYYGQVATAQQAANLPPGERQRGNGKYSCVASCVGIKSADGYLLKFTALGQRNAIDILKEASSLVVESLTRVVEQIDASGLSISLGELERQQGGLATGYLVQHMTMTMFPTSCVLMDNNADQIEFVGLTDVQLKELRDALVTLAKEITSVSPLATS* # ORIGINAL: g2590.t1 original gene structure, not modified by PASA NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS gene 1497 3099 . - . ID=g2590;Name=g2590.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS mRNA 1497 3099 . - . ID=g2590.t1;Parent=g2590;Name=g2590.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 2318 3099 . - . ID=g2590.t1.exon1;Parent=g2590.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 2318 3099 . - 0 ID=cds.g2590.t1;Parent=g2590.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 1497 2250 . - . ID=g2590.t1.exon2;Parent=g2590.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 1497 2250 . - 1 ID=cds.g2590.t1;Parent=g2590.t1 #PROT g2590.t1 g2590 MELQEWIDDSCMVVGSAYDCVGVSPMNHFMNLNKIQMPAVDEFLAAIQCRKRNVDALGSLLEGEKLWVSGSPGMEILDKETQSFVNPIARFAYGQSGYNAIAILGTIHASLTKDIVSSKGKLYKMRVEGAAGQNQLLKSMTFIEKRRHEELKKDLNTFKRGIGQLIKTYNVEQKHEYVSALQQLISSGEAVGEGGLAPQDSSAAEVVVCAPQNSSDAQEVVCAPQNSSDDEVVPVVGVRPQKRLTCEEVIGKRVVRGPDWRVSVKWDNGDTYSYWWGGEDGRYDLAIVESTSPPSEAETAPESVKRLTSKDMVGKRVVRGPDWQWDNQDNEGGGLVIANKGNNWLRVKWDTTVENTYRWGVDGCYDLAIVESTSPPLEAETAPEPVKRLTCEEMIGKQVVRGRDWKWDDQDGGIGKKGLVVTCSARNWLLVKWDNMIRESYRWGYKGCYDLAVVDETTSASSETKTAPEPVKRLTCEEMIGKRVVRGPDWRWNNQDNEGEGLVIVNTETTG* # ORIGINAL: g2593.t1 original gene structure, not modified by PASA NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS gene 15363 16127 . - . ID=g2593;Name=g2593.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS mRNA 15363 16127 . - . ID=g2593.t1;Parent=g2593;Name=g2593.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 15363 16127 . - . ID=g2593.t1.exon1;Parent=g2593.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 15363 16127 . - 0 ID=cds.g2593.t1;Parent=g2593.t1 #PROT g2593.t1 g2593 MAFSASETMSYFKEIERKFPHRISSAKQNSVLLNFESVKGVTFPNKYAACGINVVDADTFVTAKQMLDKGMNPLVLNMASELRPGGGWRKGSIAQEEALFYRSTYSMLLEPRKMCYPLKADEFIYSRDVFVFMDEQQVAMDWPDCYWMDCIAMPGIRNPPVTTNGRLSAAHERLLEQKIRAICATAVKHNNDSLVLSALLGCGAFHNPPEHVAQIFNRATDEVRKSFRQITFAVLGVGNAGLQNLRAFRNEFGQ* # ORIGINAL: g2592.t1 original gene structure, not modified by PASA NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS gene 8350 12622 . + . ID=g2592;Name=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS mRNA 8350 12622 . + . ID=g2592.t1;Parent=g2592;Name=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 8350 8869 . + . ID=g2592.t1.exon1;Parent=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 8350 8869 . + 0 ID=cds.g2592.t1;Parent=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 8993 9490 . + . ID=g2592.t1.exon2;Parent=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 8993 9490 . + 2 ID=cds.g2592.t1;Parent=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS exon 9633 12622 . + . ID=g2592.t1.exon3;Parent=g2592.t1 NODE_848_length_16834_cov_21.2155_potentialcontaminant AUGUSTUS CDS 9633 12622 . + 2 ID=cds.g2592.t1;Parent=g2592.t1 #PROT g2592.t1 g2592 MFCASGDNRTFATFLAQVEEENAQARAIEERAIEERANPIREIFASIVRELATCPAVAVTFVETIGNRFETVVKKAPIFTINTNGCWVLPPFVAINRRQFDHRQQIYNAKKHPFVWAVLVGDVIRNKGCEWIPFLAADLKLLIVNRKTGQEMKTRECDMKTLHCINPRHLVENVSITWTQKAAGVVDKTAFKGITTNELGDPVNEDDTGDHADTPDAGTTMGVIGDIPGDPVDEDDTGDYADTPDAGTTLMGVIGDIPGDPVDEDDTGEHDEAPDAGTALMDVFGDTLGDPMDEDDTGDDADTPDAGAAVMTCDIVRRQGKRPADVGAQTTPAAKRTRLDDEDGPGPFVGQLGEGWDSQSASTYVNDAAGLEIDRPVVGSPLPQIRRPEDVDDAAMAALAAISFVERGVYVPTAAVTAYVDPAKVAALEDLVTEGLVLKRNEEFRLSDAAWDHIATGSRRPEAASALLEKEFEVPSYDGCLHPMHMRCTKDGCGGQQSTRDYALCLIVPLCSLAERYECFGNPLTNSPNYKALAAYVVRLAAIDRQRLTRDLDALADKLPVLAGATVLLKMAVERLSLPSVVMRSDDGKEILIAERLRAILRGNIPQNGDATASAAECLGNAVSDILGEICSESRKCFAAMDGPLPHSWEIARGHVFGKCTRIESGCGWTRDCAVVACGPDDRVVAHDGVLDAQTMRVDGNTGDIFKEMCGVAIFGGTVFRIITRFETGPWKIKESFGVPTGTCLPYCYVVSVQCKRGDEVSKVELCRSRELHYLEWEGIEEYSSFTPPQHELCEISENSVIVICEGTVFVATFESATGHKVEVEIPNVGALSRVYFAATPRDLQSRGSFAVINVAAGIVAVFRNDFSGPVLSWDCQVPSNWDFTHNERPEAFHLLSGGDVIIAHGGSLWRCALVSEKREWAPVSAVPRPITASVVCRVEEIDAVGAPTVKEQLVIGAAHYFIVVDLESGRLEWMREVAPGIPIHMALRHEGNLLMAAVLRDSGTLQFLRVPVVGAQGNKASAGGDGHISLSYMRMDETTGDVIGIVEGTYDLVRIGENSPMAPFEAPWDRNGKIRSRCDSLVAVVMESSSVDGMYVVDVYDGGASGWTRVGRTEAAGDVVALWRVESGIVAAVAVGSQINVYFRGNHADGGLNVQLRTIAQLTVETEKSRTSANSSLRPGTSGCAMRIESLAVVPWHPCRKSVRVAAICASKKLHYADVQVPADSNSPMMELDLTIDSAVYKVDAVSGRLSPNRNGMLVTSDGRHLEFGHTQWIHHDRMWSSNQPVTTPTLFKSNDGWCFMGKSNKYGSNVSAALYGFKTGTTSTPIIVDWETL* # PASA_UPDATE: g12923.t1, single gene model update, valid-1, status:[pasa:asmbl_883,status:12], valid-1 NODE_1231_length_12875_cov_40.9141 . gene 6288 7530 . + . ID=g12923;Name=g12923.t1 NODE_1231_length_12875_cov_40.9141 . mRNA 6288 7530 . + . ID=g12923.t1;Parent=g12923;Name=g12923.t1 NODE_1231_length_12875_cov_40.9141 . five_prime_UTR 6288 6350 . + . ID=g12923.t1.utr5p1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . exon 6288 6395 . + . ID=g12923.t1.exon1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . CDS 6351 6395 . + 0 ID=cds.g12923.t1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . exon 6521 6536 . + . ID=g12923.t1.exon2;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . CDS 6521 6536 . + 0 ID=cds.g12923.t1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . exon 6643 6685 . + . ID=g12923.t1.exon3;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . CDS 6643 6685 . + 2 ID=cds.g12923.t1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . exon 7002 7068 . + . ID=g12923.t1.exon4;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . CDS 7002 7068 . + 1 ID=cds.g12923.t1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . exon 7343 7530 . + . ID=g12923.t1.exon5;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . CDS 7343 7462 . + 0 ID=cds.g12923.t1;Parent=g12923.t1 NODE_1231_length_12875_cov_40.9141 . three_prime_UTR 7463 7530 . + . ID=g12923.t1.utr3p1;Parent=g12923.t1 #PROT g12923.t1 g12923 MFGKSLAAVALGCLAFHTNPDEESFRRYLDDKMKKKGTHWLASGIVSTVTVLAYDRKNFGLFSVVYVSEHRMLYFGAFGMWLPISVRSLPVSLTGR* # ORIGINAL: g12922.t1 original gene structure, not modified by PASA NODE_1231_length_12875_cov_40.9141 AUGUSTUS gene 278 3185 . - . ID=g12922;Name=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS mRNA 278 3185 . - . ID=g12922.t1;Parent=g12922;Name=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 2790 3185 . - . ID=g12922.t1.exon1;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 2790 3185 . - 0 ID=cds.g12922.t1;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 2401 2527 . - . ID=g12922.t1.exon2;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 2401 2527 . - 0 ID=cds.g12922.t1;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 1724 1837 . - . ID=g12922.t1.exon3;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 1724 1837 . - 2 ID=cds.g12922.t1;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 1026 1258 . - . ID=g12922.t1.exon4;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 1026 1258 . - 2 ID=cds.g12922.t1;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 278 831 . - . ID=g12922.t1.exon5;Parent=g12922.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 278 831 . - 0 ID=cds.g12922.t1;Parent=g12922.t1 #PROT g12922.t1 g12922 MVANGTSTNASLATVLNVPAVNKTRPLASGSYGAYSKSRYPTLLSNETLAFSGIEDAIVRGLSLSVRLHGVADDSVGSRRDSALASLLLAANSAGRGHLTVLWAPSWLLGSQSPVALQRVELPMWSDECASRGSSGALECDYQSMFVSLSYAVNSLVAYPDVINLMTGLRVKSKDISDVLSVMVLANMTVAQAVCNWTSGNSQRIALWMHAIAPPPPSSRKIDVEIVAPIVSVVCGLAVIACFVMLMRLLRKSRCTSVAPLDPFRGFMLRNAHNWVIKYEELSFKKLIGRGSFGKVYVATWRGTSVAVKTIMTVEVESYSGRSSPQQHSGQSAHIRDAAVNLAIAPGRTSDDDGIVVPTASSLNISSGNQRETLNNFVRTSSMGVRLNRASVLSRRLSRGVSGSKQPSVSGSTSDPSLNVPAENSAEYIASRLSALQSVSAVSLEYAPLASFSASERIQRRNSNIPSDTDTFSP # ORIGINAL: g12924.t1 original gene structure, not modified by PASA NODE_1231_length_12875_cov_40.9141 AUGUSTUS gene 8090 12698 . - . ID=g12924;Name=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS mRNA 8090 12698 . - . ID=g12924.t1;Parent=g12924;Name=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 12531 12698 . - . ID=g12924.t1.exon1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 12531 12698 . - 0 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 12077 12252 . - . ID=g12924.t1.exon2;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 12077 12252 . - 0 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 11737 11860 . - . ID=g12924.t1.exon3;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 11737 11860 . - 1 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 11324 11389 . - . ID=g12924.t1.exon4;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 11324 11389 . - 0 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 10384 11152 . - . ID=g12924.t1.exon5;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 10384 11152 . - 0 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 10149 10197 . - . ID=g12924.t1.exon6;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 10149 10197 . - 2 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 9853 9976 . - . ID=g12924.t1.exon7;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 9853 9976 . - 1 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 9605 9699 . - . ID=g12924.t1.exon8;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 9605 9699 . - 0 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 9212 9409 . - . ID=g12924.t1.exon9;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 9212 9409 . - 1 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 8895 9004 . - . ID=g12924.t1.exon10;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 8895 9004 . - 1 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 8534 8585 . - . ID=g12924.t1.exon11;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 8534 8585 . - 2 ID=cds.g12924.t1;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS exon 8090 8270 . - . ID=g12924.t1.exon12;Parent=g12924.t1 NODE_1231_length_12875_cov_40.9141 AUGUSTUS CDS 8090 8270 . - 1 ID=cds.g12924.t1;Parent=g12924.t1 #PROT g12924.t1 g12924 MANTLIGTPYYMSPELFSNRPYNYKSDVWALGCCLYELATLKHAFNARDMNALVFKVLRGKVPPIPPMYSEGLRSLVISLMARLPEDRPAVADLLKLPFIRHHIGLLLEKSVKLGQSQQSQSPASSLTSGQRRSSRTSDADGQAGTPSSSSVVKLKVIADNDVSEPAMDGRGSNRDDKYRPKSANVPATPYGDDPDPMSRPVSKPQRQASSGSRDPTTPGAAPSSNRNSSNNSNNNNIGELRPTPPSMDRPISAPDHIQTRERRRIKVSDSVTDQRDHIEEDLILPSPTPMSAIGSQPRLAVGSSGSRSSLSPATPQQQQQQQQSPASVGGIEQPSPTKASGNIRARQQRRETMARNSGSSSNIAASSTALGTSERRSDVSGSLSNISDVGNGSGNSNAGGMNGSRLLTRDRLTATKSGSMESLVATTIASPLEASKRETRSLPDLPDTTRDVRKGPFLPPIAGGNTANANGTLGSAISAINLGGKKDRADTAWGTLSERNGSHPNLARPSAGKQSLAVDPDVKRASSASNIRKARLSPTGDGAHNNKSDDESFVVQEVQYAPGARFDDAGSDEEDLRVSARAVGPSRRRAPEAEDDVEEVIDLYKTQLSIRKQVVPPIPPYTPKRDSGKPIGMLTERIEVFRSKCIAGLGRDTFDRACTLLRNASDPEATDESLIELMGEDKFEEYAVMIYQVVFCESSVYD* # ORIGINAL: g1260.t1 original gene structure, not modified by PASA NODE_2133_length_7567_cov_38.9773 AUGUSTUS gene 201 7353 . - . ID=g1260;Name=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS mRNA 201 7353 . - . ID=g1260.t1;Parent=g1260;Name=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 7306 7353 . - . ID=g1260.t1.exon1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 7306 7353 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 7072 7082 . - . ID=g1260.t1.exon2;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 7072 7082 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 6494 6690 . - . ID=g1260.t1.exon3;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 6494 6690 . - 1 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 6146 6181 . - . ID=g1260.t1.exon4;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 6146 6181 . - 2 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 5717 5810 . - . ID=g1260.t1.exon5;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 5717 5810 . - 2 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 5162 5282 . - . ID=g1260.t1.exon6;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 5162 5282 . - 1 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 4467 4997 . - . ID=g1260.t1.exon7;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 4467 4997 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 4040 4221 . - . ID=g1260.t1.exon8;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 4040 4221 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 3726 3837 . - . ID=g1260.t1.exon9;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 3726 3837 . - 1 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 2929 3603 . - . ID=g1260.t1.exon10;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 2929 3603 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 2448 2704 . - . ID=g1260.t1.exon11;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 2448 2704 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 2136 2209 . - . ID=g1260.t1.exon12;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 2136 2209 . - 1 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 1619 1812 . - . ID=g1260.t1.exon13;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 1619 1812 . - 2 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 1172 1393 . - . ID=g1260.t1.exon14;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 1172 1393 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 816 956 . - . ID=g1260.t1.exon15;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 816 956 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS exon 201 365 . - . ID=g1260.t1.exon16;Parent=g1260.t1 NODE_2133_length_7567_cov_38.9773 AUGUSTUS CDS 201 365 . - 0 ID=cds.g1260.t1;Parent=g1260.t1 #PROT g1260.t1 g1260 MPSNYLKDNVAAGSAFFGIWYDLREHPFGLSETAENNLNVWPQRTPLGLFDRNTIHSAGTDCLFVGATKDKYMPMRWPKDMKSPQEFVVFSNTVAYKCANRAHWGGHSGFGFIYSAIADSMIGITTPSFGDGVIFSNAIMVGFSDNIGNPGPTSILGPGNRTMPALRAVKGVEFYAGGPAHCRNVTFRRFLLDGRWKSGAISRKIEKFGRLPINEVSNATFDDASNRVLFETSENMGDISTMFRDATWSVADARPYPTAVVFRDNFLLVDKCTCKDEWNACNCPDVFGHFRIENLAPEQTTFLPDRVVGVTLTRTVANKQYTRFLLGLGPLPLDGKASPDVPIRTMFDTIIPANQSIALQFGFIASPRTLYTLAYSKFVGDYIALAMCYPKRSVITVTRSSDDASSPAVQVMVSYADFQAANGVTSSFWDANSGTFYLRLVQSANLGRAPSVIVAAAYPPGTIDHCCTGPECAGTRTMYADSVNGNDAWSGRFAEASTDRSDGPVRTFSGLMSVLASVGASSPGANVAVSLRGGTYALHATSTITGTLNLGSLAIRPFPGETAVISSPATVPGIRIAGATASRVLFEGVRFTGGPSADYVVVVSGTSAPVSLTDCTFTQVAGAGISVTAGAKNVTLTRVTLTVARGAAVLVADSSDVSVSECTVGTTDATSACIAVLRSPRVFIDHNMVLRASGPALTVSGSDSAVVSFNRFEHACMGGNNCTAVALDGSNIDFGFNSVRYERAPLAPRIAQRTTGVVVSATSASVSIYGCLFTGHTVSGIALEGGSGIRIANNVFISTSPTQVQLPPSTSLGSGNTIFKNLFALRTCAGSVYSAPSFDKSDFASIDMNLFYCIAPDFNNATFGSSASFTPLGSVTAWRASGLDTRSMITSPNFAEDALGNYRVLGSSRAGYDLLQASARIPFCLTGPEGASLMESASSNSDDDDVQALIQGQGQDAAGNIPHYNVPLSCYDTCSGVDGEYFTPDVYPMRPMCGRTVLTTPRKNRFFVSQGESDEFVQQ* # PASA_UPDATE: g5941.t1, single gene model update, valid-1, status:[pasa:asmbl_6582,status:12],[pasa:asmbl_6583,status:12], valid-1 NODE_3806_length_2713_cov_37.2028 . gene 143 2601 . - . ID=g5941;Name=g5941.t1 NODE_3806_length_2713_cov_37.2028 . mRNA 143 2601 . - . ID=g5941.t1;Parent=g5941;Name=g5941.t1 NODE_3806_length_2713_cov_37.2028 . exon 1135 2601 . - . ID=g5941.t1.exon1;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . CDS 1135 2601 . - 0 ID=cds.g5941.t1;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . exon 886 962 . - . ID=g5941.t1.exon2;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . CDS 886 962 . - 0 ID=cds.g5941.t1;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . exon 571 661 . - . ID=g5941.t1.exon3;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . CDS 571 661 . - 1 ID=cds.g5941.t1;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . exon 143 336 . - . ID=g5941.t1.exon4;Parent=g5941.t1 NODE_3806_length_2713_cov_37.2028 . CDS 143 336 . - 0 ID=cds.g5941.t1;Parent=g5941.t1;3_prime_partial=true #PROT g5941.t1 g5941 MHTLTPPTSDQQVYGEFTFEMVNEVVREIALSPEDTFIDLGSGVGQVVLQVAAQVGCARAIGIEKKDIPGDYADSMAVEFTRRMAWWGKSHGAFELHRGDFLHKDMHQTIIGASVLFINNFAFGPELNNSIRQLFGELKEGARIVSSLNFCPLSFRITERTANDVAAIIRVRKVTYTGEGVSWTAKPFDYYVHTIDRSGLEKFFKSRTQPPPSLAIADGASRNDNGDDSGADTSSDEWGASQRRHGNGRQGNAKGTNRSGKSTPRDGKGGHVQKGRAANARKTSFSVLLNYLDGDTSDASSLDSASAAPDRGKRATARSTSTPAALGMASSAVAKGVARSATASPAVGHSAASPRKPGRPPKKHSPIALPTQTAGAVSGGGGGGGAHSEPTTPRGASTQSAAVTAGATVTLHAGLSRDKDGRVSVLPSPVASAIAIPHTVHSVTCSGATNALLDEYLAGLRGRLEVAMETVASPGAGSRVQVAAYEAEKEKQEALEQQIEEVEAEIAALDRRGRKQVAKGLKSMKFSLLTKTWKKLQGLLRIIAKHEKLQNDAVECTAAIASIKAEMSGLQDRIRDAKSRGAKRRSELKQVKRMARVVMEFAGMQDVAS # PASA_UPDATE: g799.t1, single gene model update, valid-1, status:[pasa:asmbl_5875,status:12],[pasa:asmbl_5876,status:12], valid-1 NODE_330_length_26845_cov_44.7486 . gene 4525 8794 . + . ID=g799;Name=g799.t1 NODE_330_length_26845_cov_44.7486 . mRNA 4525 8794 . + . ID=g799.t1;Parent=g799;Name=g799.t1 NODE_330_length_26845_cov_44.7486 . five_prime_UTR 4525 4665 . + . ID=g799.t1.utr5p1;Parent=g799.t1 NODE_330_length_26845_cov_44.7486 . exon 4525 8794 . + . ID=g799.t1.exon1;Parent=g799.t1 NODE_330_length_26845_cov_44.7486 . CDS 4666 8628 . + 0 ID=cds.g799.t1;Parent=g799.t1 NODE_330_length_26845_cov_44.7486 . three_prime_UTR 8629 8794 . + . ID=g799.t1.utr3p1;Parent=g799.t1 #PROT g799.t1 g799 MAAASTTDIDAVVVKLRSLLSVVDSADPDDVFARFSSIVSGAGIPLAATAEGSGADALTHVHPHAIGEEHVSPSSSLRSLLGVPNEPADSGPEAALRELSSRVRVSLLSAYCKRACTDAAESHILVSSAVRISELTASLDDAWRRYRRSRISWLCGPCDGCGDSCGSAICRYRTFVDRVIVSVSNDIAVIAAPFRRLSDVPTLVADLYGPIHAELLATVVSAYFRRTTTMRPELAELAAEICHRCVMLDTSIGTAMSKKLSEPKPPSSAVSVQSSVGRSSSDTTYNSTTLPGVVSRRGSGNLNVSSCGDVDQSSKGETVAVRSWRDILRVALDPMAPSLADTIRTAFAHSIAKDLADWEAGRGLVRALNCGSLAAFGVMDEGISRMALLESLAQSVTICMPALKIVRALGERQIACSLFCALNDYAAHLQVMSLRSPKHAAFGDAYACVTTAEALSRLAGTLLTRPQQEMLHLLHLRQQGIGGRIHCFPYAMTAALSLSGAAAITLPASLMPTPDTAAVGFGGRPVDLSASLISLRAPTTVQSVRGSVGPHQMHFAQLKAMGVADAEYARLIDCHMASHISSVHQDCDPSQSWRSTRACEYAPPRCPQLALWEMRLRAMRHDAWMSLPSRRAEAILRAVTLCSLAFLQGRHLAVSPSRVRVPQYAEDCACAVATVGTLSWSMGWTLEEWTNDESDARIVRRQRMVLDSGIAPASLESHARHHPADFHAVCSRVVASALVMSAPLSCAAELAERAGVAAAGTSVPQTGAQDKRRVALRRWFVLLHPWITTPEGALLGRLLLVRNCAGFNSRLVLSLLFADCARAADLFLMIPQLDRRAVAAQDAFKVLFTAEPSTSFNLLMHLAAAELRGDTLLSLRPDQSTGVGQWQLPGSSGPGFEGPGSRRWAELVGWELQATPPPAWVAVASRALAPFASACAAAARDGLGSIMSALGLSRSGTDISGTRPYVGEGGSVDVRRMASDLAVVVLEYASGALDALVPRPLVHAVQKAVGVVSGASKGRHVSGPMTSSLETVLVCGLVMRSIAASMRSVACEFPNTAHVIETAFDVICRAVIGLAIVPEQKQLTPGVSLMATEFRCTIAEMLTQEPAIGERFAGAAPPASTTAGRSHRPSLTKGEALAEMASGGISSVDRGIMSIDRYLSVLSESNERVSADAEVLARLRALWDVLRNEDVLVAAARKAKVDLTTVSEIGVATAGPFWPLSAFGSLACMREFARSIAPEDRTVAEWTTLLEDALVIMGEEGVRATLRRRPECDVDSCYPPLSTAERSFAEQLKTCLGSATLGSKSRSGKTFEAPSSLISH* # PASA_UPDATE: g797.t1, single gene model update, valid-1, status:[pasa:asmbl_5880,status:3], valid-1 NODE_330_length_26845_cov_44.7486 . gene 170 1724 . + . ID=g797;Name=g797.t1 NODE_330_length_26845_cov_44.7486 . mRNA 170 1724 . + . ID=g797.t1;Parent=g797;Name=g797.t1 NODE_330_length_26845_cov_44.7486 . five_prime_UTR 170 228 . + . ID=g797.t1.utr5p1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 170 251 . + . ID=g797.t1.exon1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 229 251 . + 0 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 424 426 . + . ID=g797.t1.exon2;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 424 426 . + 1 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 556 672 . + . ID=g797.t1.exon3;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 556 672 . + 1 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 810 972 . + . ID=g797.t1.exon4;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 810 972 . + 1 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 1101 1234 . + . ID=g797.t1.exon5;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 1101 1234 . + 0 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 1367 1443 . + . ID=g797.t1.exon6;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 1367 1443 . + 1 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . exon 1559 1724 . + . ID=g797.t1.exon7;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . CDS 1559 1650 . + 2 ID=cds.g797.t1;Parent=g797.t1 NODE_330_length_26845_cov_44.7486 . three_prime_UTR 1651 1724 . + . ID=g797.t1.utr3p1;Parent=g797.t1 #PROT g797.t1 g797 MTLYQTARDAKNVMRDSTLAEDDLMDELDADDVPAHIREARIAQLKQEMNQLQNMQQSSHGVYEELTVEKTFLQTTTTTKLVVCHFFHPDFKRCQIVDAHLEALAKKHFKTKFVKLNVETAGFFVEKLKIRVLPAVYSFKDGIVCDKIIGFEDFGNRDNFTTAELEERLSISGILDPQGKKPQKKSKSIFGFDEVDRDSDSD* # PASA_UPDATE: g801.t1_g802.t1, single gene model update, valid-1, status:[pasa:asmbl_5881,status:3], valid-1 NODE_330_length_26845_cov_44.7486 . gene 14958 24388 . + . ID=g801_g802;Name=MERGED%3A%20g801.t1 NODE_330_length_26845_cov_44.7486 . mRNA 14958 24388 . + . ID=g801.t1_g802.t1;Parent=g801_g802;Name=MERGED%3A%20g801.t1 NODE_330_length_26845_cov_44.7486 . five_prime_UTR 14958 15075 . + . ID=g801.t1_g802.t1.utr5p1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 14958 15886 . + . ID=g801.t1_g802.t1.exon1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 15076 15886 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 16141 16352 . + . ID=g801.t1_g802.t1.exon2;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 16141 16352 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 16550 16585 . + . ID=g801.t1_g802.t1.exon3;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 16550 16585 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 16743 16797 . + . ID=g801.t1_g802.t1.exon4;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 16743 16797 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 17124 17189 . + . ID=g801.t1_g802.t1.exon5;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 17124 17189 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 17540 17634 . + . ID=g801.t1_g802.t1.exon6;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 17540 17634 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 17946 18199 . + . ID=g801.t1_g802.t1.exon7;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 17946 18199 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 18438 18594 . + . ID=g801.t1_g802.t1.exon8;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 18438 18594 . + 1 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 19031 19159 . + . ID=g801.t1_g802.t1.exon9;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 19031 19159 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 19413 19610 . + . ID=g801.t1_g802.t1.exon10;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 19413 19610 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 19723 19803 . + . ID=g801.t1_g802.t1.exon11;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 19723 19803 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 19925 20003 . + . ID=g801.t1_g802.t1.exon12;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 19925 20003 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 20235 20600 . + . ID=g801.t1_g802.t1.exon13;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 20235 20600 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 20742 21018 . + . ID=g801.t1_g802.t1.exon14;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 20742 21018 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 21607 21679 . + . ID=g801.t1_g802.t1.exon15;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 21607 21679 . + 1 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 21896 21975 . + . ID=g801.t1_g802.t1.exon16;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 21896 21975 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 22145 22226 . + . ID=g801.t1_g802.t1.exon17;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 22145 22226 . + 1 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 22656 22662 . + . ID=g801.t1_g802.t1.exon18;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 22656 22662 . + 0 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 22893 23171 . + . ID=g801.t1_g802.t1.exon19;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 22893 23171 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 23586 23696 . + . ID=g801.t1_g802.t1.exon20;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 23586 23696 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . exon 23944 24388 . + . ID=g801.t1_g802.t1.exon21;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . CDS 23944 24338 . + 2 ID=cds.g801.t1_g802.t1;Parent=g801.t1_g802.t1 NODE_330_length_26845_cov_44.7486 . three_prime_UTR 24339 24388 . + . ID=g801.t1_g802.t1.utr3p1;Parent=g801.t1_g802.t1 #PROT g801.t1_g802.t1 g801_g802 MATTLKPRIALLIYFAIITSMYQSNTLIGVHSAGIYQFSPAVPLNALTTDVLSLTARGPSLSTEQCKLIIAVVDTLNSSSILAEVDASPIVAADGGRNQSNVTFPPFRLYDYLGALNFWSLNASAIVVGVRYGPSFVGLDLEQTTTSVYNATLTLSILIGLTAPGSAARKGNLTAASPLHVFHDDVVVNVVINADAGSTDIVTLIFKPTGASNDSGGGTVRLLRRLSGAWPTSQAVFSGVDVGVGYYDVSASAVYSRVLTVYPRVVAVYPRVLEIGGIFPRNMLAGFGDNAEVGARIAVEMINNSTELLPFTTVSFSRRFASVCSKLSAAGAVLNVLRGAECGGPSSSGFDSQVHAIVGAACSSEATSMVPIASVYKVPVISYGAASTELSNRALYPLFARTHPSTTLEGVAALAMAVYFKWRDIAVISMDTFAVSDKFASIASLVNVSISANAIIQDKPDGSGDYWSALHTIALTGTHVIACFAYGPGTGKALLKQAVDMGLVGSTYTWILGFGAYDSTLWPIRFESYNATHTYMDLFSGSLGSRVSTFGGNISISREVAARWNSLNLTAYAPENKMASSSASVGANGEPIGGLALTGSLAFDAVHVLARAYHRLAYEQGKKFADNGDAAFSLILQSNFQGIGGQVLFDANGDTVLAKRRTIQLRSDPSLGPTDASKFYVAEWGLATQDLLGVPMLEGVSIGTDSRGWVGMQWNGFHNDTPKGFSCSAAMRCSSCVGPNKCGCVCEHGVCTPDGACQCDFGYSGAICSVYVGVASGSSGVSGGIVAVIAVLPTVAMIFGVGFLMIRFLASRKRLEVLQKNVIELADIQIHDEIASGSFGTVYRGQWHGLPVALKVLHVSLETEEPSGRLFSGYGGSMDTSSHIPARSETLMMSAGSAIMRMRNLKSAILSSFLSESSVKRNGTASAIAELKAEACVMCLLRHPNVVMYLGCVERPHFAIVQEYMSNGSLMNYLAKTQDIPFPMRLKIAVHVCAGMLYLHTLDPPLLHRDLKSPNILLDDNLVAKVSDFGLSQYSSDRRFKASGQAQADLQISPVHTTGETCSNPEAMETVSDAGEDFNTHGQDVEGNRHIVGSLLWMGPEVLMGEGNTRASDVYAMGIILWELLTQEMPYSHLKNETHSFLLAQVVLQDLRPLIPDKLHEMTPAEYIRLMRECWDHRPHSRPSFESIQQRLQALTRPPLTVEPLVLPRLLLQDTVAKVNSRVALGRRIQSRMSLLPAVTSGGSTSGAPASLSPTIITSRLISHKVHPTHQCPNRDLIPN* # PASA_UPDATE: g800.t1, single gene model update, valid-1, status:[pasa:asmbl_5877,status:12], valid-1 NODE_330_length_26845_cov_44.7486 . gene 9125 13768 . - . ID=g800;Name=g800.t1 NODE_330_length_26845_cov_44.7486 . mRNA 9125 13768 . - . ID=g800.t1;Parent=g800;Name=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 13512 13768 . - . ID=g800.t1.exon1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 13512 13768 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 13180 13321 . - . ID=g800.t1.exon2;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 13180 13321 . - 1 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 12873 12935 . - . ID=g800.t1.exon3;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 12873 12935 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 12602 12745 . - . ID=g800.t1.exon4;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 12602 12745 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 12247 12375 . - . ID=g800.t1.exon5;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 12247 12375 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 11830 12048 . - . ID=g800.t1.exon6;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 11830 12048 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 11379 11537 . - . ID=g800.t1.exon7;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 11379 11537 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 11019 11112 . - . ID=g800.t1.exon8;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 11019 11112 . - 0 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 10616 10892 . - . ID=g800.t1.exon9;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 10616 10892 . - 2 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . exon 9125 10445 . - . ID=g800.t1.exon10;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . CDS 9242 10445 . - 1 ID=cds.g800.t1;Parent=g800.t1 NODE_330_length_26845_cov_44.7486 . three_prime_UTR 9125 9241 . - . ID=g800.t1.utr3p1;Parent=g800.t1 #PROT g800.t1 g800 MHLLRCLRDFVKEKARADVEYGQRLRALASSYLDQLSKSPKRHAGVSVTSRLSNKGKGSAAAVLLSKSRGQPQSADKSSQCAGELRVYDALHCALVQTEALGAQRVAVSMEHIAPIVHTMDEFEERKSASFKAVLATAKFLHEELQSTFTELEEAQKAHIRAFRRLDQCRSRLDRKTSKAFDARGRNLFKVGIAETAVSMQRAAELLESTAAEVHPSRQNFILSVTKANAHQAHYYDRQLPGLLDDLDAGFVDAVRTAIGAFAMAECQFAQSAAQYAAEATRPARDMAWEAEKRVVLSQMLQIRDHRTFAFERVVADESPDLAGESDTIIATLSVLRGELEVLRGEFEAHSNRVAWMVSSAETKRIDSANEEILRNARRELLRVERKIAQLNAQICQIEKEIGGAAATTGHMQRASTDVISLSPHSTDANQTFVAPLTMAHLAGIPSMNKSSRVYDLLRHVGANIIDDGESKSEVTANKFGRRSSTQRSSTTSKSSVSSRVSGDPPNYSEAMRSASPSAVPAHSAAQQPPLPPPRNPSLPPRPLATTVGPHTATLQSHGEAIYNTIAPAGDGDFRADLSYTSDNPFNTDPFEGDDSVCAEREAHFSANSTLTGDSNVFDAEAHGSFFPSHTDVCSPIDKDDDGDGSTTPSQPTVAPHRKPPIPPVIPRRTSSIKCNGGFFATPPLNSEERSMEIEHEMAMPFRRESTNPFENADSSFAAVSSTGQAFDMFVMTHTAPCEDLRSADKAAPASVCAVNGAPPAIPARPLPCALPADRLATKPSPGLSASKPSLQPRPYPSAGRSTLCRSNNIKPAPVDGSCDPFELPLHDMNPFCDPSVDGSACHNLSAVGTTIASANGPQRPQRAASLRPPVLIAGGSCPHNSVDFPRQLPRAAPL* # ORIGINAL: g798.t1 original gene structure, not modified by PASA NODE_330_length_26845_cov_44.7486 AUGUSTUS gene 1801 2958 . - . ID=g798;Name=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS mRNA 1801 2958 . - . ID=g798.t1;Parent=g798;Name=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 2889 2958 . - . ID=g798.t1.exon1;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 2889 2958 . - 0 ID=cds.g798.t1;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 2663 2769 . - . ID=g798.t1.exon2;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 2663 2769 . - 2 ID=cds.g798.t1;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 2333 2503 . - . ID=g798.t1.exon3;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 2333 2503 . - 0 ID=cds.g798.t1;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 2125 2229 . - . ID=g798.t1.exon4;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 2125 2229 . - 0 ID=cds.g798.t1;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 1801 1938 . - . ID=g798.t1.exon5;Parent=g798.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 1801 1938 . - 0 ID=cds.g798.t1;Parent=g798.t1 #PROT g798.t1 g798 MDADTAAALAHLLKAPSKEFVVTFFESVFRHRGSSLGLPSVFVQQCASDLGVAKEDVEQLSDAVHAIIDEALFEGRSAEEIVALFPEGMHKNLIRLITTVVVEHLPVWRAASLANQISLPKLEDFDWRIDIKTASDSLSRMSQPTVLVQMKVREVPTRTDGVPAVKAVNFELNKETLDTMLDGLGKIRDQLSSVAK* # ORIGINAL: g803.t1 original gene structure, not modified by PASA NODE_330_length_26845_cov_44.7486 AUGUSTUS gene 25102 25737 . - . ID=g803;Name=g803.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS mRNA 25102 25737 . - . ID=g803.t1;Parent=g803;Name=g803.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS exon 25102 25737 . - . ID=g803.t1.exon1;Parent=g803.t1 NODE_330_length_26845_cov_44.7486 AUGUSTUS CDS 25102 25737 . - 0 ID=cds.g803.t1;Parent=g803.t1 #PROT g803.t1 g803 MSQTYIPRHFEETDVAKMHGLIESHPFATWACVGEDGDIIVNHIPLMIDRQAGPLGTLVGHVAKANTVWKRATKSVFVFQGPDAYISPSMYPSKLESGKAVPTWNYVVVHAHGTPKFFHDRERLREIVTRLTEVHEASRQHPWEVTDAPPAYVETMLIAIVGVEITIDNLLGKWKASQNKTVADRNGVIGDLRKSNPNDEMAAIVEGMGPS* # PASA_UPDATE: g12524.t1, single gene model update, valid-1, status:[pasa:asmbl_6319,status:12], valid-1 NODE_3621_length_3101_cov_94.1913 . gene 151 3093 . - . ID=g12524;Name=g12524.t1 NODE_3621_length_3101_cov_94.1913 . mRNA 151 3093 . - . ID=g12524.t1;Parent=g12524;Name=g12524.t1 NODE_3621_length_3101_cov_94.1913 . five_prime_UTR 3053 3093 . - . ID=g12524.t1.utr5p1;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . five_prime_UTR 2809 2869 . - . ID=g12524.t1.utr5p2;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . exon 3053 3093 . - . ID=g12524.t1.exon1;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . exon 2778 2869 . - . ID=g12524.t1.exon2;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . CDS 2778 2808 . - 0 ID=cds.g12524.t1;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . exon 514 2406 . - . ID=g12524.t1.exon3;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . CDS 514 2406 . - 2 ID=cds.g12524.t1;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . exon 151 258 . - . ID=g12524.t1.exon4;Parent=g12524.t1 NODE_3621_length_3101_cov_94.1913 . CDS 151 258 . - 2 ID=cds.g12524.t1;Parent=g12524.t1;3_prime_partial=true #PROT g12524.t1 g12524 MERLHFKTATANNFRKNGAPNPLQCFNQLVVSVWAVGPDESTYLVMAVAAGRLVVRGRSPGHYAMGADETGGEHEEADAIAECASSPSEVSPFTGRLGSSALAGGIGQAQAKHEVKLEPFTPPSMERPLSQPFTVAPFAPTESAVYTCAPVASSTPAPFVSPAMASAVAVQPAIMPPPLVPAASNGNGNGNGNGHVLARGSDGSVVVNTNLGVRTSNADEALVVHGNVRVTGGIYQPSDMRIKENIRSVDTAESLARIGAVRLVDYNLRDDWMQASGRTTNQDRGVIAQELKEIIPAAVTDIGDVHLPSGRVLDGMLTVNRDALLMETVGATQELAKRTEMLDTRVDHCETAIILEDVNGTETERELRERLEAMESKHEELLKRLEKHVLASSKMPSKSDGEDGGSDAGSGHSHVHGSGVKVFRCEMNWRSMLVALVAIVLIGVVATVVPIVTRDDDDDRNIREYLDLPFLTGNVDFTTTEDSYFTERTVSAKTFCRSSTPLVASMEIVTSVHGGTIEGIVTSLPPTNAVSYDSVTGVMNFFSTELKMFECYYYQNVSVLDQGDFPLGFLNFTSLDLFSNSSRNWNNVARQANDNEGMGALNATEDLYPANACLKAPKVKEIGDPPFIVNTTCPRRRPIAAGTALKFAVGQTFSYLVTGNGYLDRLKIVSPDSDGRF # ORIGINAL: g9533.t1 original gene structure, not modified by PASA NODE_883_length_16291_cov_52.0153 AUGUSTUS gene 780 8143 . - . ID=g9533;Name=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS mRNA 780 8143 . - . ID=g9533.t1;Parent=g9533;Name=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 8032 8143 . - . ID=g9533.t1.exon1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 8032 8143 . - 0 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 6063 7798 . - . ID=g9533.t1.exon2;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 6063 7798 . - 2 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 3865 5818 . - . ID=g9533.t1.exon3;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 3865 5818 . - 0 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 3169 3550 . - . ID=g9533.t1.exon4;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 3169 3550 . - 2 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 2722 2910 . - . ID=g9533.t1.exon5;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 2722 2910 . - 1 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 2473 2528 . - . ID=g9533.t1.exon6;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 2473 2528 . - 1 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 2160 2297 . - . ID=g9533.t1.exon7;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 2160 2297 . - 2 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 1794 1916 . - . ID=g9533.t1.exon8;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 1794 1916 . - 2 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 1360 1502 . - . ID=g9533.t1.exon9;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 1360 1502 . - 2 ID=cds.g9533.t1;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS exon 780 1115 . - . ID=g9533.t1.exon10;Parent=g9533.t1 NODE_883_length_16291_cov_52.0153 AUGUSTUS CDS 780 1115 . - 0 ID=cds.g9533.t1;Parent=g9533.t1 #PROT g9533.t1 g9533 MAVVIGQRRVVLIRRLLCSVIAIIAIRGHPAQAAVVYGGSGYAVTFDGNAAFHNRNFSWPTTEFTLAFWLRTSDDYALNAVASFALSDARANNVMFEVLGTLAVDEYAYPHMAPPVGVVVTDGQWHHHAIAWRKSDCRAVYFVDGVAGGNLTAPAGTPCNVGGPGMLVIGQEQDGFGKAFEINEAFAGQLDEWRLYNKALTAAEITAAMSSVPSNPSAVASLAAYYDFDAGASSSTADRTGKSGPLVAGFPAEALASSGQCGASASSSASSDVTSRHLPVWAVSDAPVAGGSLVVRKLPRAATSTLLLPCRDDSRLASAEDASLAPCCEVTLKSAVTGAGGGAVAFSSNGTTLGVAAPFFVCPAVSPIVLSGFNGGANGDRNSSFVLTVRSAADAALSAASVDVTFVVVPNAIPVGRTLNIETGDSQSVDIRATSDTASGTFQLGIYDPDGDYGPAVFVTSLPLWGFLYQAGSSAGSLGAVISSVPTKVTLASSKIVYVPSPNQGIASDAFTFCVVDAGEKTRGAAVAADCAAGSNGTVRFAISGVNDMARAGGFGLALDGVDDQAYFNLTSPLLLSAYNATVGMWVHLPTNGPTSGEAALVRGLAADASSNVFELGLLMSSSGGTVRLRFGATAQNLTMPKPIPVDTWTYIAVTISRNSGGGAYRASLFMGNASVVPVEGIAVAVASLSSTQLAMLALGAPSTSFPFVPKIDVDELSVWNASISAAALNVARSLVVTFPPTPTERLYWPLAATDPMPVLSLHAHYALNEAGGRACVETTTGSALGLLGDRAAGVFIRWPARTASNAPGFFTVRTDEDTAVAITCPVVDSEGAYVTAQLFDLPQHGQLYQLDASGRVSTPVDAIRLGLNDIEIGQWVSSIGDYSSQWGTSVPVNTSTAHCFCAQSMIGEPGCGYQFGDCGDAWSGKTARSSLNGLENEWFVVKFARAVYVTRIEIHVNLGSDFVEYIQAIDPRGIWRTLWSGKASTVPGTKYTIFHPRICDTPFAADTIRVQINTEAVPDQWEEIDAVRLYGLEKIPSAILANYDRQLIYVPSPDFNGVDSFSYVASDCGTDAERKSAPFHVTINVNPINDAPTISLPSSSATVYAGLPTRLQAVIKDVDGQAVTTRARASSPSLVLYNLVSLSAATDTLGSPLSSTDERVLFNGSVIAVASTCGTFSVVFTGDDLTGRATSVSQPTTLTVVVPCVAGSDDRPLRIGVAVGVPVGFCVVFTIIVVLFLRHKRQVERASRQWVVRFDELEFGPKLGAGGFGTVYSGKWRGTRVAIKTIRLGDDDLLQSQALPNPNQSRIVNAVTRTLMSANGKKGSGDNSNGRRGSVSSIFTRFASTVGISWRSSATSPFSSSKGVMCCGARQKHHASDSRRAMANAFLDEIKVMCNLRHPHVLLFMGASVAYPKFALITEVMPRGDLWGILQSSMELDVPMRLRFIADAASGMQYLHSRSPPLLHCDMKAANLLVSDQWTVKVSDFGLSQFKGLSSSRRIIGSIYWIAPEILQGSAGFTEKADVYSFSIVMSEIFLRTEPYADYLDLSMDPKIELIAERICEQGVRPVIPQYVSQDCLALMKRCWTDHYVDRPDFDEIQATVLALDPGAFKADLRRVCVTGYLGVDMCEENTLSYMGWQEAKCSVLDGMFEMATDDGRQLRIYGTEIVAVSTVERNGGDVIALSLMNRPPMYLRSEKAEDQPRWLKGLRVVMQVKPGVDKNE* # PASA_UPDATE: g9534.t1, single gene model update, valid-1, status:[pasa:asmbl_9819,status:3], valid-1 NODE_883_length_16291_cov_52.0153 . gene 8897 15155 . - . ID=g9534;Name=g9534.t1 NODE_883_length_16291_cov_52.0153 . mRNA 8897 15155 . - . ID=g9534.t1;Parent=g9534;Name=g9534.t1 NODE_883_length_16291_cov_52.0153 . five_prime_UTR 15035 15155 . - . ID=g9534.t1.utr5p1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 14936 15155 . - . ID=g9534.t1.exon1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 14936 15034 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 14289 14733 . - . ID=g9534.t1.exon2;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 14289 14733 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 13677 13951 . - . ID=g9534.t1.exon3;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 13677 13951 . - 2 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 13070 13313 . - . ID=g9534.t1.exon4;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 13070 13313 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 12665 12811 . - . ID=g9534.t1.exon5;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 12665 12811 . - 2 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 12094 12284 . - . ID=g9534.t1.exon6;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 12094 12284 . - 2 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 10879 11601 . - . ID=g9534.t1.exon7;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 10879 11601 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 10589 10684 . - . ID=g9534.t1.exon8;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 10589 10684 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 10197 10363 . - . ID=g9534.t1.exon9;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 10197 10363 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 9659 9737 . - . ID=g9534.t1.exon10;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 9659 9737 . - 1 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . exon 8897 9511 . - . ID=g9534.t1.exon11;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . CDS 8963 9511 . - 0 ID=cds.g9534.t1;Parent=g9534.t1 NODE_883_length_16291_cov_52.0153 . three_prime_UTR 8897 8962 . - . ID=g9534.t1.utr3p1;Parent=g9534.t1 #PROT g9534.t1 g9534 MAAMRSLPVAAIFAASWLLVLHASASSTHTPESAWCTGVAECNDNDASTVDWCDTYKGCVHYAIPSTPQQLRGTNRLVDVAFIVHLPAHNANCTRLRDTRRIITRWLREMLSDATRVDYAVSIIGFHRRSGGVPDGTDAADPLAGAIKTDAYFISPSTTSIMLVMSSILRLGADCEDASGAEFPKGETQRDAAVRSLRVLSAVASTNVNATQLRHCNNHNLGAFDADSDYGAAGIEGVEDMCTVFDVSFRNSSEVHFVVFPDNALSFRKRSGETLPSEKTLATAASSIIAHPRHTIAVHAVVYDDHARDEESPVCPTAAAYGRPQCDRSFEDGKQFARGDTLHALQKNEKTGDRVASLQTRLLTSGRYMRTLNATRLLSDTDYLTATRPGYDLHALSSRAWDPLNRRPATRLCDDGTSENASDVGDASSSEQKTSHARHRCPIRTSTKVRNRQWTRDHIVAGHVPVLEWSPTRPFATEIAAGRRPVILRNAAPSLWPAIRKWLDFDYLADHVARSIARTHDDTAATADDASVTPVVPAAHPHTAVLENVKVGVDGRFFDPDRSSAIAKYASFRGNGSRTDADALNAVENYTLRNMTVEDFFAKLKGEVDGNIRSKVHGPNHYVNQKPTEEATSCNQEPPHEAAGEDEKEMYAHFAKLEGSLLADVRQSDHLLFLEEEDYDAHMQFAWLSSAGVRTHTHFDQDHNFFVQIFGEKRFTLFLPVEYPFMSIFPRLHPMWHKSQVDFTHPDLDAFPEYQKARAWEADLRPGDVLYVPPYTWHHVESLTTSISLSTWSHDMKLYENMKSVYRYDHNFDSAINNPMGKVFALRLYLDLMIHELFGPSQSAPFFERLLSTRYGNGVDCLLPFNIDTDLSVCVPPANTTLTAGISHRLGILRDAGVSDRDAEHDAALVAMLSSAKIPSARHVVGFANVDMKAMSTHFYDLRDPVVRAILFENYVEELVTSIVGIQKTYAFMRFCFLGQGYYYTDPDSNEHLLWLSETEGGTD* # ORIGINAL: g4318.t1 original gene structure, not modified by PASA NODE_1163_length_13443_cov_38.4838 AUGUSTUS gene 4765 6565 . + . ID=g4318;Name=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS mRNA 4765 6565 . + . ID=g4318.t1;Parent=g4318;Name=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 4765 4807 . + . ID=g4318.t1.exon1;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 4765 4807 . + 0 ID=cds.g4318.t1;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 4916 4969 . + . ID=g4318.t1.exon2;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 4916 4969 . + 2 ID=cds.g4318.t1;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 5079 5403 . + . ID=g4318.t1.exon3;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 5079 5403 . + 2 ID=cds.g4318.t1;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 5576 5851 . + . ID=g4318.t1.exon4;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 5576 5851 . + 1 ID=cds.g4318.t1;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 6001 6565 . + . ID=g4318.t1.exon5;Parent=g4318.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 6001 6565 . + 1 ID=cds.g4318.t1;Parent=g4318.t1 #PROT g4318.t1 g4318 MDFILTRFGWGRFLVVFWIAVIASIVGASELNDADDNVAAAPFEIHVGSAAPIADGWDAQSGYMFWCPCMGNFGNQVDQYLGALIAAKMSNRTVVLPPFVVYYHDAPVQTPPTMEPFDTFFKVDAVSEYHRAITMETFMRRFGKTRWPPGSRLGYCVQYFDAERKCGFDIGVPFTSFWAHFGIKFDEVSEMFGPGSERAPWWDRLTPADHPVIAMRDAMGHYPILAENRHMQRYLVWSDLIASQGRDAIGALGIVGPLVTVHLRNGNDWVRACVRVEGRRSFMSSPQCDHLRASPSKLMTANECLPSADHVASRVVKAVKQSRAKTVFVGTDEDAMVEHIVGALRESGVYAEMGGVSVITLGSNAELASRVRFRPQVELWILSQGDIFVGNCVSSFSAFVARERQLAGKPTAYFGVPWPK* # PASA_UPDATE: g4319.t1, single gene model update, valid-1, status:[pasa:asmbl_612,status:3], valid-1 NODE_1163_length_13443_cov_38.4838 . gene 6981 11487 . + . ID=g4319;Name=g4319.t1 NODE_1163_length_13443_cov_38.4838 . mRNA 6981 11487 . + . ID=g4319.t1;Parent=g4319;Name=g4319.t1 NODE_1163_length_13443_cov_38.4838 . five_prime_UTR 6981 7109 . + . ID=g4319.t1.utr5p1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 6981 7229 . + . ID=g4319.t1.exon1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 7110 7229 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 7800 7894 . + . ID=g4319.t1.exon2;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 7800 7894 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 8079 8176 . + . ID=g4319.t1.exon3;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 8079 8176 . + 1 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 8468 8646 . + . ID=g4319.t1.exon4;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 8468 8646 . + 2 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 9056 9155 . + . ID=g4319.t1.exon5;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 9056 9155 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 9372 9496 . + . ID=g4319.t1.exon6;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 9372 9496 . + 2 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 9768 9875 . + . ID=g4319.t1.exon7;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 9768 9875 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 10114 10188 . + . ID=g4319.t1.exon8;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 10114 10188 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 10511 10581 . + . ID=g4319.t1.exon9;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 10511 10581 . + 0 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 10858 10961 . + . ID=g4319.t1.exon10;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 10858 10961 . + 1 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . exon 11192 11487 . + . ID=g4319.t1.exon11;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . CDS 11192 11430 . + 2 ID=cds.g4319.t1;Parent=g4319.t1 NODE_1163_length_13443_cov_38.4838 . three_prime_UTR 11431 11487 . + . ID=g4319.t1.utr3p1;Parent=g4319.t1 #PROT g4319.t1 g4319 MFARVVRPVRQSVVAAAQPIRHSHSNKGVVYMGPGKVEVQKIPYPKLELAEQNRKCHHGVILKVIATNICGSDQHMVRGRTTAPQGLVLGHEITGEVIEAGRDCEFIKVGDVVSVPFNIACGRCPNCKAGKTGICLSVNPARPGAAYGYVDMGGWVGGQAKYVMVPYADFNLLKFPDPEQAMEKIRDLTTLSDIFPTGFHGAVTAGVGVGSTVYVAGAGPVGLAAAASSHLLGAAAVIVGDMNDARLEHARKMGCMTIDLKKDVPIPDALYALIKEPQVDAAIDCVGFEARGCGHNHSHEVPAQVLNDCMNVTKAGGGIGIPGLYVTEDPGATDKSAKQGNLSIRLGLGWSKSHFFYTGQCPVMKYHRGLMNAILFDKVRIADAVNVEVIDLDSAPAAYGDFDRGVAKKFVIDPNGCIKGPKAMCKAKSHDKCNHTH* # PASA_UPDATE: g4320.t1, single gene model update, valid-1, status:[pasa:asmbl_613,status:12], valid-1 NODE_1163_length_13443_cov_38.4838 . gene 11873 12747 . + . ID=g4320;Name=g4320.t1 NODE_1163_length_13443_cov_38.4838 . mRNA 11873 12747 . + . ID=g4320.t1;Parent=g4320;Name=g4320.t1 NODE_1163_length_13443_cov_38.4838 . five_prime_UTR 11873 12052 . + . ID=g4320.t1.utr5p1;Parent=g4320.t1 NODE_1163_length_13443_cov_38.4838 . exon 11873 12128 . + . ID=g4320.t1.exon1;Parent=g4320.t1 NODE_1163_length_13443_cov_38.4838 . CDS 12053 12128 . + 0 ID=cds.g4320.t1;Parent=g4320.t1 NODE_1163_length_13443_cov_38.4838 . exon 12392 12747 . + . ID=g4320.t1.exon2;Parent=g4320.t1 NODE_1163_length_13443_cov_38.4838 . CDS 12392 12747 . + 2 ID=cds.g4320.t1;Parent=g4320.t1 #PROT g4320.t1 g4320 MTRLFCSVALVLCAIATIISGADAQACSDYKVFIYPDTINRDAASPKIVGSLYFWNLKTNALATAVSSVAFEGIGTTLKLTQASTSTYTVELLNSEFAWSLDGGVTLDATTTKTWDFTTSIMWTGAQATACTYNPCIQVRGKC* # ORIGINAL: g4317.t1 original gene structure, not modified by PASA NODE_1163_length_13443_cov_38.4838 AUGUSTUS gene 1045 4334 . - . ID=g4317;Name=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS mRNA 1045 4334 . - . ID=g4317.t1;Parent=g4317;Name=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 4114 4334 . - . ID=g4317.t1.exon1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 4114 4334 . - 0 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 3763 3798 . - . ID=g4317.t1.exon2;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 3763 3798 . - 1 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 3361 3531 . - . ID=g4317.t1.exon3;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 3361 3531 . - 1 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 2670 3195 . - . ID=g4317.t1.exon4;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 2670 3195 . - 1 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 2436 2539 . - . ID=g4317.t1.exon5;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 2436 2539 . - 0 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 2011 2065 . - . ID=g4317.t1.exon6;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 2011 2065 . - 1 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 1363 1683 . - . ID=g4317.t1.exon7;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 1363 1683 . - 0 ID=cds.g4317.t1;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS exon 1045 1212 . - . ID=g4317.t1.exon8;Parent=g4317.t1 NODE_1163_length_13443_cov_38.4838 AUGUSTUS CDS 1045 1212 . - 0 ID=cds.g4317.t1;Parent=g4317.t1 #PROT g4317.t1 g4317 METGEIDFSLAGAGCIPYASLPAAEEGQSVKFAVLLHTTTRGKKQGKWIDFGGAIAVDDADNAHCAAREFAEETYGAFCGLETETSLLGRVFRATTRARWELTSPNAASGSPQVPVVLREGTYAVYPLKVEYVPAELLNQLSTENDGGKRIFRWFTIDEFMDVPDADVHPRIRDEDVRTMVALLDLPPCCRPGGTKSTATNESTAPAQAGSGCCGTSQGKQVASNGCGVRKDCGCGSPSCNCGNNCKCGSSCKKDTSSIADGSIEVKKSCCGSKGNAARGSVLVRPVKKFAVIQCEDSERWEGLEHLFTAQASQIADALAEPGDEWVAYAPWKGEYPSLADLDGIDGIVVTGSHHSANDDGDKGWIRLTKDLVRSCAEGGRIRVLGHCFGCQVIAAALGGVVTRNPTGKFLFGTELVHFSEAFFALPFVGDGFPPSARLVESHGECVQSPPPNATVIASSVATSIEGFVVGSNVLAMQSHPEMPAALAKDKILGILKDRGMEQADIDEAAESLKMRVDADLVLGVMRRFLHAQ* # ORIGINAL: g281.t1 original gene structure, not modified by PASA NODE_2841_length_5002_cov_40.7228 AUGUSTUS gene 1245 4662 . - . ID=g281;Name=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS mRNA 1245 4662 . - . ID=g281.t1;Parent=g281;Name=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 4166 4662 . - . ID=g281.t1.exon1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 4166 4662 . - 2 ID=cds.g281.t1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 3662 3799 . - . ID=g281.t1.exon2;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 3662 3799 . - 0 ID=cds.g281.t1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 2575 3305 . - . ID=g281.t1.exon3;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 2575 3305 . - 0 ID=cds.g281.t1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 1971 2191 . - . ID=g281.t1.exon4;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 1971 2191 . - 1 ID=cds.g281.t1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 1724 1820 . - . ID=g281.t1.exon5;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 1724 1820 . - 2 ID=cds.g281.t1;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS exon 1245 1374 . - . ID=g281.t1.exon6;Parent=g281.t1 NODE_2841_length_5002_cov_40.7228 AUGUSTUS CDS 1245 1374 . - 1 ID=cds.g281.t1;Parent=g281.t1 #PROT g281.t1 g281 GVKRQRISLKLNKPKKATIFKRVISAFARHSDDGVGDGDSDCGEEDESVALKHKRRLPPTVAANSAGVRAIGSSNSRQSESDADTNDENVFDGSGNIRPPSAQMTTYTAPGGYQKKPKGLLNFFKSINTDATPEPRAASSLAANSPVTPDNLSDDGSARFPVVGLFNMGNSCYVNAVLQLLYRAGAFASLLGDLVAQLEHAEGDAGIRSEQPRQPARQRFPLLVSLRHLYSEFEWQRAAILGIEPAQSLRPSSDITNRPPVHQLRGGPLRPVEFMRVLRSDFGDAFGYAQQDAPEFLRFLLSHVGDCRTFLARVNAVNATANATATANADANGTHYGDRSGRGDTNLDHVPVEDVGVRTEPGNAVDDCGGTADDEVVLMDLDPPAVRTALPPPPCAPIASPDGLFSGQFEVTTRCLECETATIVSDPLMGVCVPVPASGAVSVEDTLRSLFASERLRGMDKYRCDTCHSLTEAERSSRFRVLPDVLAIQLKRFAYGTVGGKICTGVSVAEQLLIDESMRGPLCEETIYDLAGAIFHSGVSTSSGHYFCYVKTAVEQDSQPSWLRIDDCDVTAPSSFTMERVLCGDDGAFSTPYVVFYRKKCVK* # PASA_UPDATE: g280.t1, single gene model update, valid-1, status:[pasa:asmbl_5106,status:12], valid-1 NODE_2841_length_5002_cov_40.7228 . gene 2 882 . + . ID=g280;Name=g280.t1 NODE_2841_length_5002_cov_40.7228 . mRNA 2 882 . + . ID=g280.t1;Parent=g280;Name=g280.t1 NODE_2841_length_5002_cov_40.7228 . five_prime_UTR 2 336 . + . ID=g280.t1.utr5p1;Parent=g280.t1 NODE_2841_length_5002_cov_40.7228 . exon 2 595 . + . ID=g280.t1.exon1;Parent=g280.t1 NODE_2841_length_5002_cov_40.7228 . CDS 337 595 . + 0 ID=cds.g280.t1;Parent=g280.t1 NODE_2841_length_5002_cov_40.7228 . exon 827 882 . + . ID=g280.t1.exon2;Parent=g280.t1 NODE_2841_length_5002_cov_40.7228 . CDS 827 882 . + 2 ID=cds.g280.t1;Parent=g280.t1 #PROT g280.t1 g280 MFKLNRHADRSFYNDQAFHKRVLSLIPRDRIAWNCDLRIALNCDLRAQIQDSSGLSALDGVDTLNLRHFRELVDVSAFGRVHVLNLILNPNATVAKGLVLLAQY* # ORIGINAL: g6512.t1 original gene structure, not modified by PASA NODE_3401_length_3556_cov_38.8607 AUGUSTUS gene 559 3423 . - . ID=g6512;Name=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS mRNA 559 3423 . - . ID=g6512.t1;Parent=g6512;Name=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS exon 3281 3423 . - . ID=g6512.t1.exon1;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS CDS 3281 3423 . - 0 ID=cds.g6512.t1;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS exon 1817 3119 . - . ID=g6512.t1.exon2;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS CDS 1817 3119 . - 1 ID=cds.g6512.t1;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS exon 1273 1479 . - . ID=g6512.t1.exon3;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS CDS 1273 1479 . - 0 ID=cds.g6512.t1;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS exon 909 1064 . - . ID=g6512.t1.exon4;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS CDS 909 1064 . - 0 ID=cds.g6512.t1;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS exon 559 570 . - . ID=g6512.t1.exon5;Parent=g6512.t1 NODE_3401_length_3556_cov_38.8607 AUGUSTUS CDS 559 570 . - 0 ID=cds.g6512.t1;Parent=g6512.t1 #PROT g6512.t1 g6512 AVGDLCRAISIDELVRRLLAVSHSNDPIARSLTLLAIAALAPIVADRKEIHHFVSIALASRDAGEADAAIEAADGVCAHSPSFASAVIDGVTSMIDSLESPIQRKTALVRIFRHSFRDENAAARSTLTCRRLVRVYPGREFVSAALDAMTRLAVEALRAGILPSHITLLLDTAACDARACIRGLAASHAYSIARRAPHEFTAAHIGALTQLMLPCSTSSPTLCAGSVRRHACAAVARLFEHNAIAIVGSVVDGGHVTPATAETVVSTLLSCVISDDVQVAASALEAMASAAACGFVPRSALPSCVASVCASSVSRRLRGMLSEEHAQAALSAVLQLARGDTSCASAAANAVASLVCVALETGRHDNGQSIDVNDDAALTVPLRFLGMMFDACGDRGAWRADIASSLGRALVIARSERLAADIARCLVRCHEHVPALGEYVLRRVSIAHDCGARYADFILARDAMRSSHPGLAVEILSVLGDRVQSHSHGLWIRALQSTAAAEAALSTAHPGSTTGHAYSGSTAHSPHAKPPLNARLAGASVPLREAVEAFKALASGSDLFPFALEYAMCRLSIADAFLASLAALRSAHVAHIAGDPPTACAEAALR* # PASA_UPDATE: g11327.t1, single gene model update, valid-1, status:[pasa:asmbl_7875,status:12], valid-1 NODE_511_length_22081_cov_41.2115 . gene 16603 18979 . + . ID=g11327;Name=g11327.t1 NODE_511_length_22081_cov_41.2115 . mRNA 16603 18979 . + . ID=g11327.t1;Parent=g11327;Name=g11327.t1 NODE_511_length_22081_cov_41.2115 . exon 16603 16855 . + . ID=g11327.t1.exon1;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . CDS 16603 16855 . + 0 ID=cds.g11327.t1;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . exon 17116 17247 . + . ID=g11327.t1.exon2;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . CDS 17116 17247 . + 2 ID=cds.g11327.t1;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . exon 17538 18058 . + . ID=g11327.t1.exon3;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . CDS 17538 18058 . + 2 ID=cds.g11327.t1;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . exon 18341 18979 . + . ID=g11327.t1.exon4;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . CDS 18341 18583 . + 0 ID=cds.g11327.t1;Parent=g11327.t1 NODE_511_length_22081_cov_41.2115 . three_prime_UTR 18584 18979 . + . ID=g11327.t1.utr3p1;Parent=g11327.t1 #PROT g11327.t1 g11327 MDGSSCGKSVTTPVSAAIGYFVRKMQRFSRPSAGKSSSSTRIVALALVVVGLLVCFVLVSPKMDPFSFFMGEPVSFGPFKCRPGGDVRQDILPARIYGSVFIGHKPMDTDSVVSSIGGAHLFKGVPALDPITHYDGRPICLVDMNQRTQLPPGVEESLIVGLIDHHALQGEIVQPGIPIHVDIKPWGSCATIIAHKYFDACVEMPRHIAGLLLAGIVSDTLMLRSPTTSDADRVAVERLSAVAEVPDLIAFSRELFSAKSELASMTAEQVAQSDFKEFFIAGSRVGFGVVETIDPNFVLNNKETYRQVLQQIKKARGLDYVFLGVVDVVDLRTKLIVPSDLEKSMALSAFDNAAYSDTIIDIGRRVSRKQEFIPALQKYLMH* # ORIGINAL: g11324.t1 original gene structure, not modified by PASA NODE_511_length_22081_cov_41.2115 AUGUSTUS gene 2409 5768 . + . ID=g11324;Name=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS mRNA 2409 5768 . + . ID=g11324.t1;Parent=g11324;Name=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 2409 2462 . + . ID=g11324.t1.exon1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 2409 2462 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 2585 2767 . + . ID=g11324.t1.exon2;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 2585 2767 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 2970 3063 . + . ID=g11324.t1.exon3;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 2970 3063 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 3201 3371 . + . ID=g11324.t1.exon4;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 3201 3371 . + 2 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 3548 3600 . + . ID=g11324.t1.exon5;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 3548 3600 . + 2 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 3872 3973 . + . ID=g11324.t1.exon6;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 3872 3973 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 4220 4363 . + . ID=g11324.t1.exon7;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 4220 4363 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 4623 4690 . + . ID=g11324.t1.exon8;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 4623 4690 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 4973 5102 . + . ID=g11324.t1.exon9;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 4973 5102 . + 1 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 5265 5374 . + . ID=g11324.t1.exon10;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 5265 5374 . + 0 ID=cds.g11324.t1;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 5660 5768 . + . ID=g11324.t1.exon11;Parent=g11324.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 5660 5768 . + 1 ID=cds.g11324.t1;Parent=g11324.t1 #PROT g11324.t1 g11324 MSGVFGDLSPKQEAALRQIKENFKNDVPTKQFPLDDYLFLRFLRARDFDVDKSTKMLRNSIDFRKKIGADELVSYKQPEILQKYLPVGFHGYDKDGCPVFVDRIGLVDFKTLMRSCRRDDFRRVKVWHGEYANARCMEQSEKLGRKIERMTAIIDMNGFGLKHLWRPGVALFAEITEIYESNYPETLNYVLVVNAPRIFPVAFNLIKPFLAEATRNKVKVLGATWRQDLEAYIDPSQTPAFLGGSCAHCSSECKDGTMCWSFNEGGEVPKELFIETEMGGENITTTNIPRGKTLKIEFEVKEPETVLRWEFTTTDYDIEFGVYFKPADKAGEKVSSGDMDAVLPSVRLDCHICPEQGAFECVKPGIYVLRWSNAYSWSRSKTLNYCVEMLPPEGQAQQVTAEVAD* # ORIGINAL: g11322.t1 original gene structure, not modified by PASA NODE_511_length_22081_cov_41.2115 AUGUSTUS gene 50 514 . + . ID=g11322;Name=g11322.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS mRNA 50 514 . + . ID=g11322.t1;Parent=g11322;Name=g11322.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 50 184 . + . ID=g11322.t1.exon1;Parent=g11322.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 50 184 . + 0 ID=cds.g11322.t1;Parent=g11322.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 431 514 . + . ID=g11322.t1.exon2;Parent=g11322.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 431 514 . + 0 ID=cds.g11322.t1;Parent=g11322.t1 #PROT g11322.t1 g11322 LSVPEFGLLISLIGSFGGSALQFVLPPIFYIILKPEMSRKERALMIFYILFGAVGGIIGTVETFRELIRKLS* # ORIGINAL: g11325.t1 original gene structure, not modified by PASA NODE_511_length_22081_cov_41.2115 AUGUSTUS gene 7204 13070 . + . ID=g11325;Name=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS mRNA 7204 13070 . + . ID=g11325.t1;Parent=g11325;Name=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 7204 7731 . + . ID=g11325.t1.exon1;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 7204 7731 . + 0 ID=cds.g11325.t1;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 7940 8268 . + . ID=g11325.t1.exon2;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 7940 8268 . + 0 ID=cds.g11325.t1;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 8556 9135 . + . ID=g11325.t1.exon3;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 8556 9135 . + 1 ID=cds.g11325.t1;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 9312 9851 . + . ID=g11325.t1.exon4;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 9312 9851 . + 0 ID=cds.g11325.t1;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 9993 13070 . + . ID=g11325.t1.exon5;Parent=g11325.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 9993 13070 . + 0 ID=cds.g11325.t1;Parent=g11325.t1 #PROT g11325.t1 g11325 MADSRASAASYGAAQSWSGASSSITGSMYGPGGRRVSTIERIAATSKRGLFSILFVMVKSHSVGQMWVVLELLIDLFQLLAFPFNSYQQNFPWNSSQSEWFQKFVRPFAFDTFFEESAAVFYIVVAILVLLLADALFVGYTFSRNKYKMLWVVNLLRNCSGLASTILYIPFTGILAARLKCHGDGVCWTGIDLFEKVLAIVVGIMFICLSLLCGICFSDANPASRAVLGRSHSRIDLCASAILAFLTIIFTLLDGNGDNSWILAGILLVSGVFTSFLFTWYLPYYRYRFSLAKVATFWLLTWSAVCLLIALASGSQDNQAFIFFAASSPLVVMAAVATADWRRRRIEASNCDDLRNALDVELKTRFYLIQAGIFFSYRPGALPSDLDYDCPVEESVAKKTVATVNAWYRTAARRNPRSSLLRLFWSNHYQYFMGNGQLALSELQAAEELSPHFDEEFFIYRRRKMVQDEIAGGKGDVIQFIKYQKHLTEAQRHDLRATHAQIAFWTELLKADPDYSALNRTARRVTTSIAKAQKSYLELLHANPNAPQTLRMYAGFNMDVVNDPGSAEALIARAAELDDFQRDDGAGKEGGNSGKQCVLEAGTMTVAEMLMDDRYATVTMSGDLHKEGLVVGTNAAACRLLGYRTRELVGRNIAAIVPEPFGAKHASYVRRYLEEGTSEWIDRPNRVFAVHKSGYAIAIVLHVKQVCSPTGGILFIGAMKPIEGMSTAEDGGHTTHSVIVSRDGTVLTCTASCGSLLGIGPEQLAPTAMRPHVTRFIPDYASMYAQAFAETSQQQQQHMQQQQKANPAGLLLKSHFDAVTIVTPRSRVIGSLDVSTMTSTGGDLAIVLNIIVRPVSSPRMESSASPRHCEDRRASLSPLSLAPPLGTHFGSSTLLGVVDEGDPTSPRHDAECTDLPPPLVVASIPTVSIKDIGNGDSASTSLRDKRLGRVRFGEASHHRASTENGEEGSIELALVSEEEDAPAVNSGDEGTINTRERFDAEDEHPFDGRDGRAPSLSGSHVSSSASARMDHVREQILYGSERATGRLALLLHLAYLLVTAGLIVIAAIGMVETMDKTQHYAKSVDAAISASTECLHTTDIATSVAKLQLVNMGVYFSENQTTLRSTLVTAATNLEATHRDLCAGVQDLPEYHKSLYMTPSIQVSVGTKTQLYNMWDLIDTVASDALLAARVSISEFTTANPSVEFLESNTAKTVFRTLETSLSYYVDAATASSAYAEDVGTRYFAIAIAFVLFSVVFIFMPLFVAIERAQTEVLWRFLVVSRRTCAQMLQRCTGRLEARRALNDGFDTADTQDLFNQLGDSEDATNAHMGDSAAAEHDHGTDHDFEAIAVGTADGAANGREKKNHVIAFGTGESVHGLRAHTRRGRARARRETHAAPPWPKRMRLMVRNQSGPIARVALLCVVAIAFYCATHALVDTFVRDNDSTAISVNYSNRRMFLMMFSMYAIREVAAPTNMNSGFFANLFEELTSEARQIHEWLLYGNATLGIQASATQPIYRSILFENGCVDSSPSDCDTYYGGLLASGMSTAYLRFLRDLANLMETAVALPSPMQLNATAAFFNSTTYNTMETFGMQYLRPSLTAMTSLFGSNLSADVSTLRDQYLTATIVFCCFAAVVYLLLLVPLPKRAREDARKMQVLLLCVPAEVLSATPPLAALIREHYNTRL* # ORIGINAL: g11323.t1 original gene structure, not modified by PASA NODE_511_length_22081_cov_41.2115 AUGUSTUS gene 1010 1654 . - . ID=g11323;Name=g11323.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS mRNA 1010 1654 . - . ID=g11323.t1;Parent=g11323;Name=g11323.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 1513 1654 . - . ID=g11323.t1.exon1;Parent=g11323.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 1513 1654 . - 0 ID=cds.g11323.t1;Parent=g11323.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 1010 1251 . - . ID=g11323.t1.exon2;Parent=g11323.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 1010 1251 . - 2 ID=cds.g11323.t1;Parent=g11323.t1 #PROT g11323.t1 g11323 MAETASDKITITVRLVKNFEYRTLKPLVLHDVDLSITVKQLMEAVNKKLSEISGYPQFRNNNFDTIKILHQPHQAKTNNPVINLDHEELILSADATLASSGVINETELSFFNRDMYEAYKLNPVCKW* # ORIGINAL: g11326.t1 original gene structure, not modified by PASA NODE_511_length_22081_cov_41.2115 AUGUSTUS gene 14858 15390 . - . ID=g11326;Name=g11326.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS mRNA 14858 15390 . - . ID=g11326.t1;Parent=g11326;Name=g11326.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 15268 15390 . - . ID=g11326.t1.exon1;Parent=g11326.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 15268 15390 . - 0 ID=cds.g11326.t1;Parent=g11326.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS exon 14858 15142 . - . ID=g11326.t1.exon2;Parent=g11326.t1 NODE_511_length_22081_cov_41.2115 AUGUSTUS CDS 14858 15142 . - 0 ID=cds.g11326.t1;Parent=g11326.t1 #PROT g11326.t1 g11326 MRPAGWLVEYAVGVPASPDYGDDVKSWTPGWKRLSFEALSGERTFWVYSSSHSKFLDHIPSGLQPAVYPTLLGFGRRVWSHAGADGTYPVALRAAMEDEVAERTGLLPRELTRLMETVSVSCARSSDVCYYLTCQ* # PASA_UPDATE: g11328.t1, single gene model update, valid-1, status:[pasa:asmbl_7876,status:3], valid-1 NODE_511_length_22081_cov_41.2115 . gene 19652 22066 . - . ID=g11328;Name=g11328.t1 NODE_511_length_22081_cov_41.2115 . mRNA 19652 22066 . - . ID=g11328.t1;Parent=g11328;Name=g11328.t1 NODE_511_length_22081_cov_41.2115 . five_prime_UTR 22040 22066 . - . ID=g11328.t1.utr5p1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 21939 22066 . - . ID=g11328.t1.exon1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 21939 22039 . - 0 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 21502 21561 . - . ID=g11328.t1.exon2;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 21502 21561 . - 1 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 21011 21085 . - . ID=g11328.t1.exon3;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 21011 21085 . - 1 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 20837 20864 . - . ID=g11328.t1.exon4;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 20837 20864 . - 1 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 20390 20463 . - . ID=g11328.t1.exon5;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 20390 20463 . - 0 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . exon 19652 20196 . - . ID=g11328.t1.exon6;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . CDS 19812 20196 . - 1 ID=cds.g11328.t1;Parent=g11328.t1 NODE_511_length_22081_cov_41.2115 . three_prime_UTR 19652 19811 . - . ID=g11328.t1.utr3p1;Parent=g11328.t1 #PROT g11328.t1 g11328 MCVAGPRPPSSNESYWKLSARGGIVVKVADFGLSKDGSENDYYRAKTNRKLPIKWMAPESLEKKIFTHSSDVWSFGIVVWEIFSTGSKPYPGLENHQVLDFLNQGKRMSSPQNCLQHPRILDILQSCWRKLPETRPSFQDLANRLDRAMADLHGRQRPNSGAVEVAHSSRAHSMLVTVNPMLTEVGSPDAKFVESTTSGSRDSARYDLGSDGSAYAEYAPSEDGLYADQVTLIPPKAPPH* # ORIGINAL: g7874.t1 original gene structure, not modified by PASA NODE_8594_length_364_cov_25.9827 AUGUSTUS gene 1 364 . - . ID=g7874;Name=g7874.t1 NODE_8594_length_364_cov_25.9827 AUGUSTUS mRNA 1 364 . - . ID=g7874.t1;Parent=g7874;Name=g7874.t1 NODE_8594_length_364_cov_25.9827 AUGUSTUS exon 1 364 . - . ID=g7874.t1.exon1;Parent=g7874.t1 NODE_8594_length_364_cov_25.9827 AUGUSTUS CDS 1 364 . - 1 ID=cds.g7874.t1;Parent=g7874.t1 #PROT g7874.t1 g7874 GDVFSDPVIAQCGHSFCRGCVVVAAVAGAPQPGSATARGQGTLGLLREPPSCPTDGTALSPRGPFIPNIIVAEQVAELLVHCRHSCIQRDDGSFVVCDAEDEGCPAHVRLGARDDHEAACE # ORIGINAL: g2698.t1 original gene structure, not modified by PASA NODE_21038_length_141_cov_28.8636_potentialcontaminant AUGUSTUS gene 2 141 . + . ID=g2698;Name=g2698.t1 NODE_21038_length_141_cov_28.8636_potentialcontaminant AUGUSTUS mRNA 2 141 . + . ID=g2698.t1;Parent=g2698;Name=g2698.t1 NODE_21038_length_141_cov_28.8636_potentialcontaminant AUGUSTUS exon 2 141 . + . ID=g2698.t1.exon1;Parent=g2698.t1 NODE_21038_length_141_cov_28.8636_potentialcontaminant AUGUSTUS CDS 2 141 . + 2 ID=cds.g2698.t1;Parent=g2698.t1 #PROT g2698.t1 g2698 RRRRIRRRRRRIRRRRRKTRRRRRRRRRIRRRRRRRRRRRKRTRRT # PASA_UPDATE: g2694.t1, single gene model update, valid-1, status:[pasa:asmbl_8225,status:12], valid-1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . gene 222 624 . - . ID=g2694;Name=g2694.t1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . mRNA 222 624 . - . ID=g2694.t1;Parent=g2694;Name=g2694.t1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . five_prime_UTR 624 624 . - . ID=g2694.t1.utr5p1;Parent=g2694.t1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . exon 477 624 . - . ID=g2694.t1.exon1;Parent=g2694.t1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . CDS 477 623 . - 0 ID=cds.g2694.t1;Parent=g2694.t1;5_prime_partial=true NODE_5680_length_755_cov_18.9265_potentialcontaminant . exon 222 305 . - . ID=g2694.t1.exon2;Parent=g2694.t1 NODE_5680_length_755_cov_18.9265_potentialcontaminant . CDS 222 305 . - 0 ID=cds.g2694.t1;Parent=g2694.t1;3_prime_partial=true #PROT g2694.t1 g2694 AEYLEAVFQKANYVQQVFVYGNSLKTFLLAVVVPDPEKIFPYAEKNGLPQDLKALAANPAINKLILDAMTAIGKAEK # ORIGINAL: g8970.t1 original gene structure, not modified by PASA NODE_3286_length_3831_cov_39.0415 AUGUSTUS gene 1237 3156 . + . ID=g8970;Name=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS mRNA 1237 3156 . + . ID=g8970.t1;Parent=g8970;Name=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 1237 1327 . + . ID=g8970.t1.exon1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 1237 1327 . + 0 ID=cds.g8970.t1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 1510 1683 . + . ID=g8970.t1.exon2;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 1510 1683 . + 2 ID=cds.g8970.t1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 1873 1973 . + . ID=g8970.t1.exon3;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 1873 1973 . + 2 ID=cds.g8970.t1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 2258 2386 . + . ID=g8970.t1.exon4;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 2258 2386 . + 0 ID=cds.g8970.t1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 2614 2708 . + . ID=g8970.t1.exon5;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 2614 2708 . + 0 ID=cds.g8970.t1;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS exon 2967 3156 . + . ID=g8970.t1.exon6;Parent=g8970.t1 NODE_3286_length_3831_cov_39.0415 AUGUSTUS CDS 2967 3156 . + 1 ID=cds.g8970.t1;Parent=g8970.t1 #PROT g8970.t1 g8970 MLQQADRPLLPVSVIRFRVGQLWGCVDGGSVSAFYFENRERRMYINAHVWTQSKFLGTSVASMLVGQASLKLLNHDGEEYILTFPNAYGRSIFTVPKMELGGKTTITCEKTGYAADIEFKTKPMIGGQWHEVACHVRDNPDPRKPFCRISGKWNGELEITDVQTKETTEFFRASSAHGKMRKSVRPLETQGEYESRRLWNDVTDALRAKDIPAATKAKEFLENRQRKEAAERKEAGAEWSPRHFALAGENWVYKNILKE* # ORIGINAL: g394.t1 original gene structure, not modified by PASA NODE_2389_length_6446_cov_40.7407 AUGUSTUS gene 2045 3158 . - . ID=g394;Name=g394.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS mRNA 2045 3158 . - . ID=g394.t1;Parent=g394;Name=g394.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS exon 3046 3158 . - . ID=g394.t1.exon1;Parent=g394.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS CDS 3046 3158 . - 0 ID=cds.g394.t1;Parent=g394.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS exon 2045 2903 . - . ID=g394.t1.exon2;Parent=g394.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS CDS 2045 2903 . - 1 ID=cds.g394.t1;Parent=g394.t1 #PROT g394.t1 g394 MPSVLARHSGSSQCPTQTLAATGRHVEFSPVGASACCMVGRLEHILRRNAARASSEETVERPEPISPLDMALVESLAMAIVADISGEVETATVAAQSKKAVPEAMPWLALFHGADSLHEAIGQANAEDKAVLMTALGTLRALAKGVRAWYAPFGRRAAAALDAVIDSCLAMWVVPKDDKLTLVTAQKAVAAAALAARKRIDERRRVSLPLVGGGGPKTKHALKVALYDYCRRPPLGREPGVSPRVARDTEVASRRNMHAIGEAEWLQWGDGETRRAFRARGFFLASANERAAHLQGPAAGMDTRLIEPPPYEGASFAAFPVAE* # PASA_UPDATE: g393.t1, single gene model update, valid-1, status:[pasa:asmbl_4193,status:12], valid-1 NODE_2389_length_6446_cov_40.7407 . gene 49 1066 . + . ID=g393;Name=g393.t1 NODE_2389_length_6446_cov_40.7407 . mRNA 49 1066 . + . ID=g393.t1;Parent=g393;Name=g393.t1 NODE_2389_length_6446_cov_40.7407 . exon 49 135 . + . ID=g393.t1.exon1;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . CDS 49 135 . + 0 ID=cds.g393.t1;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . exon 338 545 . + . ID=g393.t1.exon2;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . CDS 338 545 . + 0 ID=cds.g393.t1;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . exon 852 1066 . + . ID=g393.t1.exon3;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . CDS 852 1030 . + 2 ID=cds.g393.t1;Parent=g393.t1 NODE_2389_length_6446_cov_40.7407 . three_prime_UTR 1031 1066 . + . ID=g393.t1.utr3p1;Parent=g393.t1 #PROT g393.t1 g393 MKPELDRDELATIRNNVKKSYKIDIDDEKIRTVNDHLYRESFLQKSRDAAVYCRSRYNGSAPDAPNGLQCRDVVLFWRMNEMLGATGKTLRQQVMVHKGKLEREVKGILDTISADLERKRELVGGRRVELAEQIEITRFISAKLEQFIQQLQRESLA* # ORIGINAL: g395.t1 original gene structure, not modified by PASA NODE_2389_length_6446_cov_40.7407 AUGUSTUS gene 4096 4776 . - . ID=g395;Name=g395.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS mRNA 4096 4776 . - . ID=g395.t1;Parent=g395;Name=g395.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS exon 4096 4776 . - . ID=g395.t1.exon1;Parent=g395.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS CDS 4096 4776 . - 0 ID=cds.g395.t1;Parent=g395.t1 #PROT g395.t1 g395 MPTPEQRVRITLALGAWTRPVLGDALFLAAMSPLQVADERAVDGRLRFQVAYPRTDHAEDFGPLVVNEEVQPVAMQLGVESPGHPAAATSFQRRYERVTLTRTLTAKFPAGNACGIGGLRSLAPGEASSLYFDVYNCSNIYLGTESGRRGLCVSMCLKPTSDIGPTQLILIGTDGCEHSLSISNETGILERTTTEGARLPAYVAPVPMVAVCTSHTVFLWITPLSP* # ORIGINAL: g396.t1 original gene structure, not modified by PASA NODE_2389_length_6446_cov_40.7407 AUGUSTUS gene 4829 5785 . - . ID=g396;Name=g396.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS mRNA 4829 5785 . - . ID=g396.t1;Parent=g396;Name=g396.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS exon 4829 5785 . - . ID=g396.t1.exon1;Parent=g396.t1 NODE_2389_length_6446_cov_40.7407 AUGUSTUS CDS 4829 5785 . - 0 ID=cds.g396.t1;Parent=g396.t1 #PROT g396.t1 g396 MSDFVFNANGARGGDGQNGRDGSSAYGSGMYGQDGGCAGPARPGEHAGAAVVHLESCAGGGPVGPGDVLVRGSACDVRGCGVATDERTVRANDIGRVAVFSIGGDGGHGGIGGDGGNGGTGSSGMDATRYSSGTNGGHGGNGGDGGRGSDGADGGSGGLARVTCFAGDEYLLMSVPGIDLDASEPGGIVHGGMGGNPGRHGRPGMGGAGGRGGSGYSWTETKTETRTVYVNGSSRTEVYTSTTSHSNPGGYSGPAGRNGCTPTLILQRGNNGPHGRIELVVHGDRRGLATVVYGRRYDLELTQFYLAEEPGFNNDGVF* # ORIGINAL: g12209.t1 original gene structure, not modified by PASA NODE_2881_length_4854_cov_66.3988 AUGUSTUS gene 3795 4496 . + . ID=g12209;Name=g12209.t1 NODE_2881_length_4854_cov_66.3988 AUGUSTUS mRNA 3795 4496 . + . ID=g12209.t1;Parent=g12209;Name=g12209.t1 NODE_2881_length_4854_cov_66.3988 AUGUSTUS exon 3795 3933 . + . ID=g12209.t1.exon1;Parent=g12209.t1 NODE_2881_length_4854_cov_66.3988 AUGUSTUS CDS 3795 3933 . + 0 ID=cds.g12209.t1;Parent=g12209.t1 NODE_2881_length_4854_cov_66.3988 AUGUSTUS exon 4294 4496 . + . ID=g12209.t1.exon2;Parent=g12209.t1 NODE_2881_length_4854_cov_66.3988 AUGUSTUS CDS 4294 4496 . + 2 ID=cds.g12209.t1;Parent=g12209.t1 #PROT g12209.t1 g12209 MAAEVRTAAAALRLPLVRALVSYLLVATDADGAESIVEAISELVEDDAGKRLFVLDECLSFLLEFVSRGKPPITGSYDDDEEEQAARDLFADLRRSLSVPLSLKVCFGVHGHC* # PASA_UPDATE: g12058.t1, single gene model update, valid-1, status:[pasa:asmbl_1196,status:12],[pasa:asmbl_1197,status:12], valid-1 NODE_131_length_36689_cov_41.605 . gene 10523 12090 . - . ID=g12058;Name=g12058.t1 NODE_131_length_36689_cov_41.605 . mRNA 10523 12090 . - . ID=g12058.t1;Parent=g12058;Name=g12058.t1 NODE_131_length_36689_cov_41.605 . exon 10523 12090 . - . ID=g12058.t1.exon1;Parent=g12058.t1 NODE_131_length_36689_cov_41.605 . CDS 10564 12090 . - 0 ID=cds.g12058.t1;Parent=g12058.t1 NODE_131_length_36689_cov_41.605 . three_prime_UTR 10523 10563 . - . ID=g12058.t1.utr3p1;Parent=g12058.t1 #PROT g12058.t1 g12058 MPSFSSVPIEVLVTHIIVPYLANADVIRLSRVNAFFRFHLRNLCIFTLRRGIAMNYCKDEDFRCDVLAVFPKERLVIGIDEKYFNAINLSVLSGLHTVELCGCEGLRDVSALGGVHTLNLGDCTGVVDVSALGKVHTLFLGGCHAVVNVSALGGVHTLHLSDCMGVVDVSALGGVHTLDLTNCDGIVDVSALGKVHTLFLGGCYGVVNVSALGGVHTLNLYKCIGVVDVSALGGVHKLSLSGCERVVDVSALGRVHTLNIDNCTGLTDVFALGSVHHLDLHDSIGVVDVTALGGVHTLYLDGCISVMDVSALGGVYLLSLTECTGVVDVSALGKVHTLDLLSCTGVFDVSSLGTVHTLTLGWCENVVDVSSLGGVHSLDLSGCTGVVDVSALGAVHTLNVSGCSELVDVSALGAVHTLYLSECNGVVDVSSLGGVHTLNLSGSAGVVDVPALSGVHTLNLSGCTGVMDVSALGGVHTLNLSGCTGVSDASALSGVHTLNLLGCIGMRG* # ORIGINAL: g12055.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 1512 3954 . + . ID=g12055;Name=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 1512 3954 . + . ID=g12055.t1;Parent=g12055;Name=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 1512 2117 . + . ID=g12055.t1.exon1;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 1512 2117 . + 0 ID=cds.g12055.t1;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 2685 2986 . + . ID=g12055.t1.exon2;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 2685 2986 . + 0 ID=cds.g12055.t1;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 3240 3324 . + . ID=g12055.t1.exon3;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 3240 3324 . + 1 ID=cds.g12055.t1;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 3511 3954 . + . ID=g12055.t1.exon4;Parent=g12055.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 3511 3954 . + 0 ID=cds.g12055.t1;Parent=g12055.t1 #PROT g12055.t1 g12055 MNIVAMLAGGHGSHDDDDYNNVEEDLQVIAEVLALEMEALRPKPPPTLRDRLITFMDKPSSSKYARAYAVYMCFVIMLSTVAFLLETIPSLTRRNDQIVAWFAVKTFCVANFAIELSARLWAEPSKGRYLLSFWGFIDVVAVPPYFIELGITGWDGTANESRAFVLLRVVRLTRLIRVAKLGRGSTQIRHLGNALSRSWLGMVALLIGLAMGVILFGSFEFFAEFDSFTLVDGEYIYTRGTLNGNVTSFQSIVASAWWSVVTLTTTGYGDAVPTTAGGKVVGIVTMILGLVVVAFPVTLITASLREVYKDVRHEKKKDEIVQARLALATSWEHDQEAPTQTSATEVAALFVDLARKHDALMEEYTILKRCAENIELSFEALAEVLDQAPTLQELRAMPATIAHPTTLSADPGTTRPSLLSAAALRFGSTFSVRKSGGGGGEGTSLSLADGTARVSNGSIASESIPNDSKMDVTTLGKR* # PASA_UPDATE: g12054.t1, single gene model update, valid-1, status:[pasa:asmbl_1190,status:12], valid-1 NODE_131_length_36689_cov_41.605 . gene 78 1068 . - . ID=g12054;Name=g12054.t1 NODE_131_length_36689_cov_41.605 . mRNA 78 1068 . - . ID=g12054.t1;Parent=g12054;Name=g12054.t1 NODE_131_length_36689_cov_41.605 . five_prime_UTR 1004 1068 . - . ID=g12054.t1.utr5p1;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . exon 986 1068 . - . ID=g12054.t1.exon1;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . CDS 986 1003 . - 0 ID=cds.g12054.t1;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . exon 646 732 . - . ID=g12054.t1.exon2;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . CDS 646 732 . - 0 ID=cds.g12054.t1;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . exon 78 305 . - . ID=g12054.t1.exon3;Parent=g12054.t1 NODE_131_length_36689_cov_41.605 . CDS 78 305 . - 0 ID=cds.g12054.t1;Parent=g12054.t1;3_prime_partial=true #PROT g12054.t1 g12054 MAPVIKVGIIGGSGLDDPKLFENRTEKYVDTPYGKPSDALICGNIRGVDCVLLARHGRKHNISPTNVNYRANIHALKSEGCTHLIVSTACGSLREEIAPGQLVILDQFIDR # ORIGINAL: g12056.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 4953 7138 . + . ID=g12056;Name=g12056.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 4953 7138 . + . ID=g12056.t1;Parent=g12056;Name=g12056.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 4953 6158 . + . ID=g12056.t1.exon1;Parent=g12056.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 4953 6158 . + 0 ID=cds.g12056.t1;Parent=g12056.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 6440 7138 . + . ID=g12056.t1.exon2;Parent=g12056.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 6440 7138 . + 0 ID=cds.g12056.t1;Parent=g12056.t1 #PROT g12056.t1 g12056 MAGTASGLELTFEQLTFGDDNDVPSSPAPNHDELDDDLVDSPGGNDDSPAHDDSPEANDDADDAFGDADAAFGSRRSSVPGDLRKPRVRRDSYTRRENARKQQGDLEDAHCIVFRNLPPMQSFDLFLAMVAKECGVVQQYQFTKGNDLGYIKFPNSVAVQTAIERLNNLSYSGSTLSVERCTKFPTGVDHRSQSTSETKNRVLVLKNLPFQMREDELKQTLASLPNAPGPVSLQLFYDAGGLFRGTSFATYATVVDAELGYAALNGAEIGGRTVRAEFKRADGPNGASGLPGTLLPSRSGGRIPMGAYEPPDEDCRRIYEQLKAFQANDRLVDMAFPPTLTSTQRKNVHVMADSLGLCHASNGDGEQRNIRVWKRMEGRSHSVSTSHGDDGRTRARTISGSQAQPRSRANTTNSARSIGSHNDAVAHSPGSASQGSQFGKYMAMARSLGAPAGGPLSTSPTGFSRFTQSRRHSSAEGVAASGHPASTSGASGGTSPSPAPSPLRQPRGPDGSTGFAVDRPSAGYFAAVATASAAPRSAAVNIPGGGATSASSSSGSLRGERSSSFAGRSVQFSPGTAGPSAPPPSLASSVVSASSVSAAVMRKASKGEIDLSLAAKSLLNPQAAAFTFVPKNSM* # ORIGINAL: g12060.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 17972 19646 . - . ID=g12060;Name=g12060.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 17972 19646 . - . ID=g12060.t1;Parent=g12060;Name=g12060.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 19167 19646 . - . ID=g12060.t1.exon1;Parent=g12060.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 19167 19646 . - 0 ID=cds.g12060.t1;Parent=g12060.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 17972 18823 . - . ID=g12060.t1.exon2;Parent=g12060.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 17972 18823 . - 0 ID=cds.g12060.t1;Parent=g12060.t1 #PROT g12060.t1 g12060 MSTPVADSALAAARSPKLESRYQKATRELSSKQFAKEVVHGKRIGYYKIRSDIGAGNFASVKLAFHTLTNEKVAIKIVDKTKLDVKTEKLLQGEVVAMEGVHHPNILRLYEVIETHSKLYMIMEFAPKGDLFSKIHENGRMEEEDARTIFADVLAGVGHCHDKGIIHRDIKAQNLLFDSFNMVKVADFGFSTITNPDNLLNTFCGSPPYAAPELFREEVYDGTKVDVWALGILLYFMVTGNMPFEGETVTKLKAQVLAGTHREVPTFVSENCKDMILSILVSDPKARPSVRDLMQHKWLEGCVFREADKPHTMAPDDPGADSEIEEAVGLMKDIGITNSTLNMAPKKDSRNQITGTYRIALHKVQKTRMRANSQDDDDDEEANGANSSFKDRLIPSKKNSDKKDSVASKKGSVASKKGSVASKKGVASKKAGGAPQTKICTVL* # PASA_UPDATE: g12062.t1, single gene model update, valid-1, status:[pasa:asmbl_1193,status:3], valid-1 NODE_131_length_36689_cov_41.605 . gene 22805 24578 . + . ID=g12062;Name=g12062.t1 NODE_131_length_36689_cov_41.605 . mRNA 22805 24578 . + . ID=g12062.t1;Parent=g12062;Name=g12062.t1 NODE_131_length_36689_cov_41.605 . five_prime_UTR 22805 22885 . + . ID=g12062.t1.utr5p1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 22805 22952 . + . ID=g12062.t1.exon1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 22886 22952 . + 0 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 23079 23156 . + . ID=g12062.t1.exon2;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 23079 23156 . + 2 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 23329 23486 . + . ID=g12062.t1.exon3;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 23329 23486 . + 2 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 23608 23706 . + . ID=g12062.t1.exon4;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 23608 23706 . + 0 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 23897 23966 . + . ID=g12062.t1.exon5;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 23897 23966 . + 0 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . exon 24372 24578 . + . ID=g12062.t1.exon6;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . CDS 24372 24496 . + 2 ID=cds.g12062.t1;Parent=g12062.t1 NODE_131_length_36689_cov_41.605 . three_prime_UTR 24497 24578 . + . ID=g12062.t1.utr3p1;Parent=g12062.t1 #PROT g12062.t1 g12062 MLIVLADDHKEHLGFLASVNPEVVGEFCKIAMDFIRKGTNTRIYSSAAQRLSVDVETVRHGVEGLIFLLTESAKLFVSELDFQDSIITMAFSAELNKQLLELYLGNRKEIRTVLSEMAMTLPQYGNLEWRLDVQLSSRTLAHEVQPNLLLKLDLKQPEAVSHLLQADPANLVHMTSVLETALAELKTAHCRRIIRNIK* # ORIGINAL: g12061.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 21313 22041 . - . ID=g12061;Name=g12061.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 21313 22041 . - . ID=g12061.t1;Parent=g12061;Name=g12061.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 21891 22041 . - . ID=g12061.t1.exon1;Parent=g12061.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 21891 22041 . - 0 ID=cds.g12061.t1;Parent=g12061.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 21313 21719 . - . ID=g12061.t1.exon2;Parent=g12061.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 21313 21719 . - 2 ID=cds.g12061.t1;Parent=g12061.t1 #PROT g12061.t1 g12061 MTFSIWLPKKRTKFGLPLTIRIISKSTSSVLAHKSIQFWGDQKILKELVLARLRTHRNYPEYARQLLDADLSPTSKFAKDLASLLKPPARPDEVIQHLQSLADKLGEGQDHTSPAGPGPEPSALSTTRISSPRMQLFGSDGNDTSLDFGALSSLSNGTLRIDDYLDFASSSDFDGIDVLSFPTST* # ORIGINAL: g12057.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 8641 10233 . + . ID=g12057;Name=g12057.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 8641 10233 . + . ID=g12057.t1;Parent=g12057;Name=g12057.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 8641 10233 . + . ID=g12057.t1.exon1;Parent=g12057.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 8641 10233 . + 0 ID=cds.g12057.t1;Parent=g12057.t1 #PROT g12057.t1 g12057 MQDQVSAAVASVMVTPTRAVAAADSSQADAPSALTKSAWPQSLLPVRASDSGQFGVSTPPNGSAFDCLPDEILQTIIILSIRTDQPGESAAERLVRLRLVCNRFCDLIDLFIRRRFKSGLPLEAVAYTTNTSSEKLIVLSNSQCPFGTPLRKNNGYIFLVGGALHLRADALRLDLYPTDPILISHGGYGFRSRRTSLHFDRLDASAPLEDHSLFLCEASASAALQSMARESDAVEGRKLTGSVLPADDRAHAANDSTAGPIGGLARVRQAASLLSRPLVDFRVDALELSSVTDYLPFFSALSRTGDKLPLCLFMRLIVFEGYRTLCNALVAAIGHRFASETHCMWIEAFNKCASRDGMHFMLRALRRCTDYFEPTLRQSLTAVDSELRALAPECSHSAELDVVFTMDARPRGWYTRQLCLHVLCLLLSGDLRVGADIGEQLRSIVNDQICFYTEERTMAVQRCCERIHRRRQLEDQLRVINISLIGRLSNDKLFRSYVEGTTTMSVRGVKAALIEKLHETALPAQYGTIC* # PASA_UPDATE: g12059.t1, single gene model update, valid-1, status:[pasa:asmbl_1191,status:3], valid-1 NODE_131_length_36689_cov_41.605 . gene 12512 16989 . + . ID=g12059;Name=g12059.t1 NODE_131_length_36689_cov_41.605 . mRNA 12512 16989 . + . ID=g12059.t1;Parent=g12059;Name=g12059.t1 NODE_131_length_36689_cov_41.605 . five_prime_UTR 12512 12724 . + . ID=g12059.t1.utr5p1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 12512 13015 . + . ID=g12059.t1.exon1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 12725 13015 . + 0 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 13588 13716 . + . ID=g12059.t1.exon2;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 13588 13716 . + 0 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 14160 14580 . + . ID=g12059.t1.exon3;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 14160 14580 . + 0 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 14903 15019 . + . ID=g12059.t1.exon4;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 14903 15019 . + 2 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 15355 15480 . + . ID=g12059.t1.exon5;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 15355 15480 . + 2 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 15796 16041 . + . ID=g12059.t1.exon6;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 15796 16041 . + 2 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . exon 16246 16989 . + . ID=g12059.t1.exon7;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . CDS 16246 16610 . + 2 ID=cds.g12059.t1;Parent=g12059.t1 NODE_131_length_36689_cov_41.605 . three_prime_UTR 16611 16989 . + . ID=g12059.t1.utr3p1;Parent=g12059.t1 #PROT g12059.t1 g12059 MACASHRRRRVSATSALLLIVVVCATLHCASATWWPFASEQEQQSEGDATEDATEGGFHRGVERYQAPFELHNVDHTRQMEVELYLKGANGNACQLRILDGLRKSCSSMSEEEISKVGVNLFSCQSEMEGRPAFPCTADMTIAECTSPMDAATWNAYHIVSMRARDICLHLQSELFRLQTEATINGLRVSAASMVGSLSRLREVQEEAREAALEGIAELREGNTAIADKQRELAHRQGEIAVAVGSLHGMVEKSRELVEQAHQIIRDEGASIATDMRKGFGDAREQLSAHQKEAHDRHESLMTDIAALRSQADDVRSSLAEATSSIEAHRGESEEYFANTIGNLKKINATVELLLYIVALADSKLSLLSEDFGAASLQVDFAFMLVTYTVVCSVAGALMVFLRMPMGYRWSLLALFLVRIQLERHGVPVPMRAFIASIGALYAAFFYISVSRTVRPKPSTSSATGAATSSKSIRSHLSEDADCDHDCPSHSGYTDIKPAPKRIAVSKRFSVGSDDTCDMSSDIEGLGGLKEHASPRVGMATRSRSSTPSSIPSKGRISRRNVTV* # ORIGINAL: g12063.t1 original gene structure, not modified by PASA NODE_131_length_36689_cov_41.605 AUGUSTUS gene 25515 36519 . + . ID=g12063;Name=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS mRNA 25515 36519 . + . ID=g12063.t1;Parent=g12063;Name=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 25515 25532 . + . ID=g12063.t1.exon1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 25515 25532 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 25836 25934 . + . ID=g12063.t1.exon2;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 25836 25934 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 26245 26406 . + . ID=g12063.t1.exon3;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 26245 26406 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 26650 26834 . + . ID=g12063.t1.exon4;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 26650 26834 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 27226 27346 . + . ID=g12063.t1.exon5;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 27226 27346 . + 1 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 27589 27700 . + . ID=g12063.t1.exon6;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 27589 27700 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 28057 28070 . + . ID=g12063.t1.exon7;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 28057 28070 . + 2 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 28310 28376 . + . ID=g12063.t1.exon8;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 28310 28376 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 28632 28865 . + . ID=g12063.t1.exon9;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 28632 28865 . + 2 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 29081 29346 . + . ID=g12063.t1.exon10;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 29081 29346 . + 2 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 29559 29645 . + . ID=g12063.t1.exon11;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 29559 29645 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 29986 30066 . + . ID=g12063.t1.exon12;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 29986 30066 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 30254 30415 . + . ID=g12063.t1.exon13;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 30254 30415 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 30564 30746 . + . ID=g12063.t1.exon14;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 30564 30746 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 30978 31102 . + . ID=g12063.t1.exon15;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 30978 31102 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 31311 31398 . + . ID=g12063.t1.exon16;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 31311 31398 . + 1 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 31683 32093 . + . ID=g12063.t1.exon17;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 31683 32093 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 32384 32692 . + . ID=g12063.t1.exon18;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 32384 32692 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 32943 33142 . + . ID=g12063.t1.exon19;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 32943 33142 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 33419 33860 . + . ID=g12063.t1.exon20;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 33419 33860 . + 1 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 34035 34162 . + . ID=g12063.t1.exon21;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 34035 34162 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 34552 34672 . + . ID=g12063.t1.exon22;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 34552 34672 . + 1 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 34965 35072 . + . ID=g12063.t1.exon23;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 34965 35072 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 35246 35992 . + . ID=g12063.t1.exon24;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 35246 35992 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS exon 36265 36519 . + . ID=g12063.t1.exon25;Parent=g12063.t1 NODE_131_length_36689_cov_41.605 AUGUSTUS CDS 36265 36519 . + 0 ID=cds.g12063.t1;Parent=g12063.t1 #PROT g12063.t1 g12063 MSFFEPGAWVWLKANNQWVPGRIVENRGSDVVIENDNTQERSTHAVAALNHETCTPMHQTSIESIEDMAALSDLHEGAILHNIKIRYKKDKCYTFIGSILAAVNPYKKLDIYGKEVLTSYNKKVIGELPPHIYAIANEAYYSMWKMRQNQCVLISGESGAGKTESTKFILKYLSNLSSGPSVTEKQILESSPIMEAFGNAKTVYNNNSSRFGKFIAVAFSEAGHIEGAKMTDYLLEKNPGERNYHIFYNIMAGMPAAEKATLNLTEPKDFYYMSQSGVVSDPNIDDVEDFKAVREAMVVMSFTPEQIRDIFKVLAAILHIGNCQFGKQGNANLQSKTPLDLAAALLGLNASTLGEAMVKKKMTLRGESISSPLDVSQAVDSRDSLGMKLYMQLFQWIVARINKIIRTKETFFSVGVLDIFGFENFKENSFEQMCINYANEKLQQYFNKHIFSIEQAEYTKENINWANIKWVDNQECLDLIESKLGLLSLLDEESKFPKGTDDSFLTKIHSQHEKQPFYTKPRLTKTNFGIKHYAGEVLYETKGFLEKNRDTFRDDLIELLQESKSDFVYDLFEHLVASDKGGKAGAAKKMTVSAQFKESLTQLMTALSAANPFFVRCIKPNMAKVANTFDHTVVMNQLRYSGMLETVRIRRTGYPVRKAFSDFAFRYKVLHPAGAMSPDPTERCKAILKRYDAAGKDWQNGKTKVFLREALEAVLEKQRQGELHKVGMKIKSRVMGYIQRKRFKKLRAATVKIQARFRGYRAKKLYKKKKAAAIMIQKLWRGYKARKLRKRLLEERRKEIERKREEERRREEERRKEMERLKEQNKLKELEELKKKEEEEKAAKAARDQAEQAKKKAESAEAQSLAKKVTEVLRAEEAVEQETKRKADAEAAAKKRAEEEAKLVQQAHDTLDSLGALDELDQVLGAAGDDIVAEKGEDEDDNDDNASEKPEDDISKEGFIWWIAESKLRRVWKKRWAIIEDGSVTLYGCKPDGYRCGFLQKPSGKLRMWKPIWVMLRDTSILIYKSDDEGEPVHKEIPLAKCTGLFEATASKAGKDNCIGLVLPHKTIYLGCDSPEDRTAWIDLLHKVRSNNDEEIKKLPIGRADPKNAQDTFDLHAIVATEAKAAPDARPNYFTVTTHQRLYEFSCELAQDTADWSDALKPRRKFEGQGGAAAGTEQGWLIKRGKTMNHRRWFVLRDDTLHCYKSPEDPFSMESVQLNSLCTIFPPVDVVCQETGQWSFVLNARKKSHHLIAKTKADSQRWIEALQDVITSKVPAESQTEKLIGELKTAKEAQVAALYAAYPVLRHSDKPITQPLLPLPYGQLHPDYRTLHEEAIDIFRALLEPEHVADPVPLIQTIVKACLCLPYLKSEVYCQVIKQLINPPKPGGVVNLRDWLLLAVLCASCIPARKFVRYLRFHLKRVIDGFPNTEMAAYADFCMTAIDNTKHRELPPSKDEIESIRLRKPVRIEIALQGDKSMELDVTSSWTAEEVIEHLHNELGTGTSTNRFGLCERICDRTYALEDKRMLMDVLARWEARGAKTNGSTAKFAFCIVVFCETDGAKIKNSKELEFLFEQ # PASA_UPDATE: g3507.t1, single gene model update, valid-1, status:[pasa:asmbl_386,status:3], valid-1 NODE_1100_length_14013_cov_41.2159 . gene 6714 10473 . + . ID=g3507;Name=g3507.t1 NODE_1100_length_14013_cov_41.2159 . mRNA 6714 10473 . + . ID=g3507.t1;Parent=g3507;Name=g3507.t1 NODE_1100_length_14013_cov_41.2159 . five_prime_UTR 6714 6921 . + . ID=g3507.t1.utr5p1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 6714 7100 . + . ID=g3507.t1.exon1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 6922 7100 . + 0 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 7246 7321 . + . ID=g3507.t1.exon2;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 7246 7321 . + 1 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 7473 7674 . + . ID=g3507.t1.exon3;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 7473 7674 . + 0 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 7820 7866 . + . ID=g3507.t1.exon4;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 7820 7866 . + 2 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 8093 8233 . + . ID=g3507.t1.exon5;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 8093 8233 . + 0 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 8421 8474 . + . ID=g3507.t1.exon6;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 8421 8474 . + 0 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 8800 8945 . + . ID=g3507.t1.exon7;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 8800 8945 . + 0 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . exon 9107 10473 . + . ID=g3507.t1.exon8;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . CDS 9107 10424 . + 1 ID=cds.g3507.t1;Parent=g3507.t1 NODE_1100_length_14013_cov_41.2159 . three_prime_UTR 10425 10473 . + . ID=g3507.t1.utr3p1;Parent=g3507.t1 #PROT g3507.t1 g3507 MAAPGHTLGQSGPPATPQSNHTDTNTNANANNGGDDAAEECIDCVNPISPSEVVLLARIGRGSFGDVYKAQWRGRVVAAKRVEKDCVTSEEQVLSRLDHRNIIRYHGSFARDNDRFIITDYAELGSLFNYLQVPDVSVNTKTIIAWARQIAEGMLYLHGQNIVHRDLKSPNVLVCCAPDGHEGLVMKICDFGASRFVPNSVYMSFAGTPSWCAPEILRGQKASVRSDVHSFGVVLWELLTREVPFKDFDQRAIMYLVGSQTHTLPIPTGCPRAFESLMLRCWLYPPPKRPTFVEILAELEAMSAEQSLEDATASFIASKCTWLPAVSDELRRLLQMERGLRERERIVEEKEKQLKVLEMRLKNQSFGMPTAHAPAHARGHIHSNLNHHNPHRPIGVSGANELDGRPRQVERWTEDGVISWVEALPGHLASYAPAFRANNICGTRLCRMDDATLREMGITSLGHRDALTRAIKDLIHSMQFPPLRSPASPQKRGATQPPSVHPPPHSKASAPPPAPATGPAPLSRAESHPPQQTATAGKDSSGSRTASDKKGGRRRGGSRTSLSTTASNGGSAKSLSSSTASAGSSTTNPAPAPAPAAAHAAAAGRAALSGGVEDGQISVKLFFGSVSSADGSWRCFVETNDGLTGEYVRDVEFVPDGAISGVLVAAAPFEYAASGAPPASIDCRVRFREYFQKKVKRHALRLRSDGTSATAVEDVTLIPR* # ORIGINAL: g3508.t1 original gene structure, not modified by PASA NODE_1100_length_14013_cov_41.2159 AUGUSTUS gene 10598 13724 . - . ID=g3508;Name=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS mRNA 10598 13724 . - . ID=g3508.t1;Parent=g3508;Name=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 13654 13724 . - . ID=g3508.t1.exon1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 13654 13724 . - 0 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 13234 13391 . - . ID=g3508.t1.exon2;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 13234 13391 . - 1 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 12667 13131 . - . ID=g3508.t1.exon3;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 12667 13131 . - 2 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 12085 12548 . - . ID=g3508.t1.exon4;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 12085 12548 . - 2 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 11729 11836 . - . ID=g3508.t1.exon5;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 11729 11836 . - 0 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 11490 11577 . - . ID=g3508.t1.exon6;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 11490 11577 . - 0 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 11250 11327 . - . ID=g3508.t1.exon7;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 11250 11327 . - 2 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 11002 11120 . - . ID=g3508.t1.exon8;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 11002 11120 . - 2 ID=cds.g3508.t1;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 10598 10906 . - . ID=g3508.t1.exon9;Parent=g3508.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 10598 10906 . - 0 ID=cds.g3508.t1;Parent=g3508.t1 #PROT g3508.t1 g3508 MPSVAELIGVQLIQLQKNLECPIWACVAQCLKNKEECPCCKAPMTRRSLSANPHLRELVDAYRHLDECIRLDSSGKVASFRRSIVPSQASQQPMPMPPTPPTPPSKALKEMGHVLPATVSDVTATAINTAACLQSAKRKRVNRGDASEDHVHASAIDKAPDGEDHSDSDMSIALCDRASPPAKRRHAGMDTCSTPQAAKMGGMLSVHVDDGMRTAKVTLMVKTHENVGGFPAAVAPLKAKGPAADRAREGVDAKADKENDDGLHMVHANDCSDDDSDIMEASLFKRPGRVWCANAPAAQCEQQRSDKSTKAAPQSPGVRAVRIANDAKPLRTQLPPALAANGQVDHIVRVKGRRQEAKQPETVHVERLSVALPRPARDAASPWPAECATNPAQIPLWVSAAAEKSARPRVALATTGLDDRQMAQLNEAALRMGAVVVGDLSQHATHLIATVDSHGFARRTLKYFNAILLGKWIVTFEWITASANAGRFLPEEPYEIHSSIGSGRGVPSRARTARASGHGGLFSGVTFSFDGSHTTPTTEQLTELIRNGGGRMIGDKAAMHAEAGASATPRLVCLFPRDCQPSAQTLRKVREGWTLLNAWWVMDCAAEFMLLPEVDYAAG* # PASA_UPDATE: g3505.t1, single gene model update, valid-1, status:[pasa:asmbl_385,status:12], valid-1 NODE_1100_length_14013_cov_41.2159 . gene 190 1058 . + . ID=g3505;Name=g3505.t1 NODE_1100_length_14013_cov_41.2159 . mRNA 190 1058 . + . ID=g3505.t1;Parent=g3505;Name=g3505.t1 NODE_1100_length_14013_cov_41.2159 . exon 190 301 . + . ID=g3505.t1.exon1;Parent=g3505.t1 NODE_1100_length_14013_cov_41.2159 . CDS 190 301 . + 0 ID=cds.g3505.t1;Parent=g3505.t1;5_prime_partial=true NODE_1100_length_14013_cov_41.2159 . exon 661 1058 . + . ID=g3505.t1.exon2;Parent=g3505.t1 NODE_1100_length_14013_cov_41.2159 . CDS 661 947 . + 2 ID=cds.g3505.t1;Parent=g3505.t1 NODE_1100_length_14013_cov_41.2159 . three_prime_UTR 948 1058 . + . ID=g3505.t1.utr3p1;Parent=g3505.t1 #PROT g3505.t1 g3505 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARDELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSQQLKNQK* # ORIGINAL: g3506.t1 original gene structure, not modified by PASA NODE_1100_length_14013_cov_41.2159 AUGUSTUS gene 1386 5769 . - . ID=g3506;Name=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS mRNA 1386 5769 . - . ID=g3506.t1;Parent=g3506;Name=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 5521 5769 . - . ID=g3506.t1.exon1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 5521 5769 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 5202 5376 . - . ID=g3506.t1.exon2;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 5202 5376 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 5050 5093 . - . ID=g3506.t1.exon3;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 5050 5093 . - 2 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 4849 4910 . - . ID=g3506.t1.exon4;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 4849 4910 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 4505 4588 . - . ID=g3506.t1.exon5;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 4505 4588 . - 1 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 4175 4255 . - . ID=g3506.t1.exon6;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 4175 4255 . - 1 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 4012 4076 . - . ID=g3506.t1.exon7;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 4012 4076 . - 1 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 3808 3899 . - . ID=g3506.t1.exon8;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 3808 3899 . - 2 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 3469 3562 . - . ID=g3506.t1.exon9;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 3469 3562 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 3163 3287 . - . ID=g3506.t1.exon10;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 3163 3287 . - 2 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 2259 3000 . - . ID=g3506.t1.exon11;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 2259 3000 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 2003 2074 . - . ID=g3506.t1.exon12;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 2003 2074 . - 2 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 1717 1826 . - . ID=g3506.t1.exon13;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 1717 1826 . - 2 ID=cds.g3506.t1;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS exon 1386 1526 . - . ID=g3506.t1.exon14;Parent=g3506.t1 NODE_1100_length_14013_cov_41.2159 AUGUSTUS CDS 1386 1526 . - 0 ID=cds.g3506.t1;Parent=g3506.t1 #PROT g3506.t1 g3506 MSSTVTETVEPPTKRLRLETGHGNASSAPTAPAAAQAEPEADLSSLARGIPLDPLPAPATGAEREGVPHAPTRLPNLCPEDVKLALSNALRYFPAHLHETLAPEFLAELRTYGHIYMYRFRPRHYRMRAHPIALYPARSRQAAAIMHMIMNNLDAEVAQFPHELITYGGNGSVFSNWAQYHLMMYYLSQMTEEQTLVMYSGHPVGLFPSHRDAPRVIVTNGMVIPNYSSKEDYERMYALGVTQYGQMTAGSYCYIGPQGIVHGTTLTLLNAARKYLGTSDLTGKVFVTAGLGGMSGAQPKAGVICGAIAVIAEISPAALHKRHRQGWLQEYTEDLDNLVERIRSARQDRRVVSIGYLGNIVDVWERLADEPELLVELGSDQTSCHNPFNGGYYPVGLSYDDANTMMTADAEGFKVLVRNSLRRHVTAINRLVERGMRFWDYGNSFMLEARRAGAAIDSPDGRSFRYPSYVEDIMGDIFSLGFGPFRWVCTSRDHADLVETDRIAAEAIDALYRASPERTRQQYADNQLWIRSVEGHQLVVGSEARILYSDEQGRIAIAEAMNAAVASGRLRGPVVISRDHHDVSGTDSPWRETSHIRDGSMFCADMAIQNVIGDSFRGATWVAIHNGGGTGWGEAINGGFGLVLDGTPDASRRSRMMLKWDVNNGIARRAWAGVDNAEFQIARAMELEPNLRVTMPNHADSALLARVTDQQ* # ORIGINAL: g8731.t1 original gene structure, not modified by PASA NODE_3089_length_4353_cov_41.5194 AUGUSTUS gene 2 271 . + . ID=g8731;Name=g8731.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS mRNA 2 271 . + . ID=g8731.t1;Parent=g8731;Name=g8731.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS exon 2 271 . + . ID=g8731.t1.exon1;Parent=g8731.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS CDS 2 271 . + 0 ID=cds.g8731.t1;Parent=g8731.t1 #PROT g8731.t1 g8731 FDMFCRGTRIMFQVSEDKSYVTTVGQLNFFRWVIENKLVEFIESHMNKILQSENQDEKKTPALIKAVKPPQSQTRVELPGGRAILVSIT* # ORIGINAL: g8732.t1 original gene structure, not modified by PASA NODE_3089_length_4353_cov_41.5194 AUGUSTUS gene 3260 4051 . + . ID=g8732;Name=g8732.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS mRNA 3260 4051 . + . ID=g8732.t1;Parent=g8732;Name=g8732.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS exon 3260 4051 . + . ID=g8732.t1.exon1;Parent=g8732.t1 NODE_3089_length_4353_cov_41.5194 AUGUSTUS CDS 3260 4051 . + 0 ID=cds.g8732.t1;Parent=g8732.t1 #PROT g8732.t1 g8732 MCTDVYNAVADLRTDNQAVVISADFAHSDEFPLVACLAFALAPKTPRIWDAIRILHTRVRSKCALHNLEKVMRRLAAASDDSLGEFIYDMRECNFEHFGRFTPTPVPGVDGLYLGTIADTSEVILTQLGIKHVASFSPENHERINKIKSAMPTIRWLANDKLHDGGMSALHLFEEFCKFVDKVPPGEPILVHCRIGYSRSPTMVIAYMVWKYKMTVDDACKRIKQTRCIYPNERFWKDLSIWAEQQRAYPPLTTVSALFESVP* # ORIGINAL: g6050.t1 original gene structure, not modified by PASA NODE_4187_length_2056_cov_41.1625 AUGUSTUS gene 2 1616 . + . ID=g6050;Name=g6050.t1 NODE_4187_length_2056_cov_41.1625 AUGUSTUS mRNA 2 1616 . + . ID=g6050.t1;Parent=g6050;Name=g6050.t1 NODE_4187_length_2056_cov_41.1625 AUGUSTUS exon 2 1616 . + . ID=g6050.t1.exon1;Parent=g6050.t1 NODE_4187_length_2056_cov_41.1625 AUGUSTUS CDS 2 1616 . + 1 ID=cds.g6050.t1;Parent=g6050.t1 #PROT g6050.t1 g6050 CNCNQCACEPDAFYVYDGAKCDCARIPCRDNCNGNGVCGCGGICTCSLGFTGAACECRSGVSICQVGDSLCVRGTCIPGECSKNKCACSVGYINDAKTGLCTVEVKACPIGPNGLVCSGNGNCNTTTGLCDCTAPFSSTASNPACSCNTDSTICPNGCSGHGSCVCGVCVCEAGYKADVDSPSYDCSCPRGACKDDCNGHGSCVCGKCVCSKGYRGNFCDDYCPFTGATCAQLDCDTTGKTIDRTGKVLYNYCDEECGICRCVTGGGPDCRCSTNECPSINAKTCSGHGSCSCAQCTCDAGWASPATGCGYNTTKACPADNEDGAPDFCGARKGRGRCVYGELDEYLNLLFAKCECNADADGIPLWSGDSCNCSTSACTMSDEPGNPLCGAKGKCVCGKCLCSNGYQKDAAGNCLERCTDATQNNCKNSGDTQACSGRGNCTCGECKCPWPWSGRFCEICTDESCYDCAAKTLCADCAQQPFCAWCGTNNDGGSPTGVCIKRIAQSNMKCDFNSTSYGLCMSECGPSSNKPQVLTLL* # ORIGINAL: g3749.t1 original gene structure, not modified by PASA NODE_4452_length_1599_cov_41.1391 AUGUSTUS gene 219 1498 . + . ID=g3749;Name=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS mRNA 219 1498 . + . ID=g3749.t1;Parent=g3749;Name=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS exon 219 485 . + . ID=g3749.t1.exon1;Parent=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS CDS 219 485 . + 1 ID=cds.g3749.t1;Parent=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS exon 666 783 . + . ID=g3749.t1.exon2;Parent=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS CDS 666 783 . + 1 ID=cds.g3749.t1;Parent=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS exon 1278 1498 . + . ID=g3749.t1.exon3;Parent=g3749.t1 NODE_4452_length_1599_cov_41.1391 AUGUSTUS CDS 1278 1498 . + 0 ID=cds.g3749.t1;Parent=g3749.t1 #PROT g3749.t1 g3749 EDQRRAFLHPPAGIRKVVLATNIAETSITIDDVTAVIDCVMMRETHYDPDTGMASLDTTAISRANATQRRGRAGRVRAGICYHLTTKHRYNVVLEEAQQPEMRRVPLEQMVLRVKLMGLGDTEGRLAQGVLGRVIEPPEAEAVKAAVASLVVIGALTDRERLTPLGYHLAALPVDARLGKLIVLGTVFRCLDPTLTIAATM # PASA_UPDATE: g7222.t1, single gene model update, valid-1, status:[pasa:asmbl_7934,status:3], valid-1 NODE_520_length_21918_cov_42.5231 . gene 12106 16547 . + . ID=g7222;Name=g7222.t1 NODE_520_length_21918_cov_42.5231 . mRNA 12106 16547 . + . ID=g7222.t1;Parent=g7222;Name=g7222.t1 NODE_520_length_21918_cov_42.5231 . five_prime_UTR 12106 12176 . + . ID=g7222.t1.utr5p1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 12106 12180 . + . ID=g7222.t1.exon1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 12177 12180 . + 0 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 12348 12358 . + . ID=g7222.t1.exon2;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 12348 12358 . + 2 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 12549 12675 . + . ID=g7222.t1.exon3;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 12549 12675 . + 0 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 12881 13091 . + . ID=g7222.t1.exon4;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 12881 13091 . + 2 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 13394 13528 . + . ID=g7222.t1.exon5;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 13394 13528 . + 1 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 13870 13987 . + . ID=g7222.t1.exon6;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 13870 13987 . + 1 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 14292 14390 . + . ID=g7222.t1.exon7;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 14292 14390 . + 0 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 14714 14810 . + . ID=g7222.t1.exon8;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 14714 14810 . + 0 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 15003 15054 . + . ID=g7222.t1.exon9;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 15003 15054 . + 2 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 15259 15366 . + . ID=g7222.t1.exon10;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 15259 15366 . + 1 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 15514 15519 . + . ID=g7222.t1.exon11;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 15514 15519 . + 1 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 15729 15864 . + . ID=g7222.t1.exon12;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 15729 15864 . + 1 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . exon 16115 16547 . + . ID=g7222.t1.exon13;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . CDS 16115 16264 . + 0 ID=cds.g7222.t1;Parent=g7222.t1 NODE_520_length_21918_cov_42.5231 . three_prime_UTR 16265 16547 . + . ID=g7222.t1.utr3p1;Parent=g7222.t1 #PROT g7222.t1 g7222 MADADSPTDSPAGNRKELGGYVGFANLPNQVHRKSVKKGFEFCLMVVGESGLGKSTLVNSLFLTDLYTEREYLPAADRIKKTVDVSATTVEFEEKGVRLRLTVVDTPGFGDAVNNDDAWVPIENYINTQYEQYLNDEFRVNRTKIVDNRVHCCLYFLSPTGHGLKPIDVEFMKRLAKKVNIVPVIAKSDTLTPEEVQAMKEKALEDIEKHNIAIYQFQIDSEDDDDTVRECKDLQASVPFAVVGSNTVIEVGGKKIRGRQYPWGVVEIENEAHSDFSKLRNMLIRSHMEDLKDSTNDIHYENFRSTKLAQMSNLGQSEADRNINPMDKFEEEKKEHEKKMNKMEEEMRSVFTLKVKEKEMKLKESEKELMVKHEELQKQLEQQKRELEDRQRAFEEERKQYEAQGDKKKDKKGSKIF* # ORIGINAL: g7220.t1 original gene structure, not modified by PASA NODE_520_length_21918_cov_42.5231 AUGUSTUS gene 4845 6485 . + . ID=g7220;Name=g7220.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS mRNA 4845 6485 . + . ID=g7220.t1;Parent=g7220;Name=g7220.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 4845 6485 . + . ID=g7220.t1.exon1;Parent=g7220.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 4845 6485 . + 0 ID=cds.g7220.t1;Parent=g7220.t1 #PROT g7220.t1 g7220 MAAVCIPQPFVAMGSSTIVPASSYRSHSSDDEHAMSLVVDGDGDDAVHGHHDESGSHSGSADLTTSDDDAVDMSESLPAHITIAGITDQLRNLCKVMHDTIPNLQQNAVYEVSKWINYPVQVLVSDLHRPADDFGRYYMSTRSIGEFVLHILSANMTVKTNITTTIVRKFKAVNPDLSKYGLLVKTLGQKPEKSFLVQTIPMQSEQVSAAGKGRGSHQNSRGTSYYWPFWQIPRIVQPLIHTIRRSKAFRDIQYMPPGATPAPQTATPPTPVAALPMHVGASSGYKTPPRTPTRQNSELTKGSARKKCRSVSLSSDEGAPTVPAGLSSPLIVSANGRTKTTPRSKKQRDRSPENKPDIRVQLAPRMSSRRGRDDSDSDERSECEEEFLRNMRAPMVPASAPLSNASSMFAKSADATLFSIGAPATTTTTATTTRTPTPGMSALSVQMTMAAGAVHKRHPSGSEDSGLGSGPDDCRTAAALASSNTSTNVLWSESRQRDYMRADEIERSIEAKRAKIEEYNNILVGLLFEVAQEEQALKMLRGSLAS* # PASA_UPDATE: g7221.t1, single gene model update, valid-1, status:[pasa:asmbl_7933,status:3], valid-1 NODE_520_length_21918_cov_42.5231 . gene 8099 11286 . - . ID=g7221;Name=g7221.t1 NODE_520_length_21918_cov_42.5231 . mRNA 8099 11286 . - . ID=g7221.t1;Parent=g7221;Name=g7221.t1 NODE_520_length_21918_cov_42.5231 . five_prime_UTR 11179 11286 . - . ID=g7221.t1.utr5p1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . five_prime_UTR 10908 10978 . - . ID=g7221.t1.utr5p2;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 11179 11286 . - . ID=g7221.t1.exon1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 10775 10978 . - . ID=g7221.t1.exon2;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 10775 10907 . - 0 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 10363 10534 . - . ID=g7221.t1.exon3;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 10363 10534 . - 2 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 9780 9958 . - . ID=g7221.t1.exon4;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 9780 9958 . - 1 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 9298 9455 . - . ID=g7221.t1.exon5;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 9298 9455 . - 2 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 8847 9023 . - . ID=g7221.t1.exon6;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 8847 9023 . - 0 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 8495 8658 . - . ID=g7221.t1.exon7;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 8495 8658 . - 0 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . exon 8099 8342 . - . ID=g7221.t1.exon8;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . CDS 8267 8342 . - 1 ID=cds.g7221.t1;Parent=g7221.t1 NODE_520_length_21918_cov_42.5231 . three_prime_UTR 8099 8266 . - . ID=g7221.t1.utr3p1;Parent=g7221.t1 #PROT g7221.t1 g7221 MLLSETEFFFNANAGYLEGLVRGIRSGILKQNDYYNLVQCETLEDLKLHLQSTDYGSFLANEPSPLAVSVISDRLTEKNVTEFTHLRNQALEPLATFMDYITYGYMIDNIILLITGTLHERDLSELIPKCHPLGMFESMGSLTIASTPAELYNSVLIDTPLAPYFLNCISEQDLDEMHVEIIRNTLYKAYIEDFFNFCQYIGGATFEVMKPILEFEADRRAFIITINSFDTELSKDDRAKLYPTCGKLFPEGLSKLARCDDFEQVRGVADFYGEYGPLFEGCGTGAGDKSLDDKFFEYEVRLNRNAFEQQFHAGIFYALVKLKEQETRNIVWIAECIAQNHRAKIENYVPIF* # ORIGINAL: g7223.t1 original gene structure, not modified by PASA NODE_520_length_21918_cov_42.5231 AUGUSTUS gene 16820 19099 . - . ID=g7223;Name=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS mRNA 16820 19099 . - . ID=g7223.t1;Parent=g7223;Name=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 19014 19099 . - . ID=g7223.t1.exon1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 19014 19099 . - 0 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 18605 18776 . - . ID=g7223.t1.exon2;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 18605 18776 . - 1 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 18297 18443 . - . ID=g7223.t1.exon3;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 18297 18443 . - 0 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 18050 18159 . - . ID=g7223.t1.exon4;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 18050 18159 . - 0 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 17625 17785 . - . ID=g7223.t1.exon5;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 17625 17785 . - 1 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 17186 17312 . - . ID=g7223.t1.exon6;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 17186 17312 . - 2 ID=cds.g7223.t1;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 16820 16991 . - . ID=g7223.t1.exon7;Parent=g7223.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 16820 16991 . - 1 ID=cds.g7223.t1;Parent=g7223.t1 #PROT g7223.t1 g7223 MAATGAMDDDEAALYDRQIRLWGAEAQKRMRSSRLLVAGMRGLAAETLKNCVLAGVHSVTILDSHIVQWEDLGANFFLSEEDVGKNRAEAAVEKVRALNPMVKITTDTADISTKDDEYFSQFDIACIFDLGLTETMRVNNICREKNVKFFAGSVFGMYGFFFADLGIHEYVEETRIHSQETGETTTKFTSGRIEYVPLSSAVATNWSAFTPRKLKNLNKAVLFTILLLRFRGAHGRSPVSGDEASLAADRDAIFPPNVAAIAGNEDIQILCANAAYELSPIAAIVGGLLSQEVLKAASKKEMPHNNLFVYNGIDGTNSCDQYGA* # PASA_UPDATE: g7219.t1, single gene model update, valid-1, status:[pasa:asmbl_7932,status:12], valid-1 NODE_520_length_21918_cov_42.5231 . gene 133 3848 . - . ID=g7219;Name=g7219.t1 NODE_520_length_21918_cov_42.5231 . mRNA 133 3848 . - . ID=g7219.t1;Parent=g7219;Name=g7219.t1 NODE_520_length_21918_cov_42.5231 . five_prime_UTR 3815 3848 . - . ID=g7219.t1.utr5p1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 3653 3848 . - . ID=g7219.t1.exon1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 3653 3814 . - 0 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 3462 3507 . - . ID=g7219.t1.exon2;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 3462 3507 . - 0 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 3110 3248 . - . ID=g7219.t1.exon3;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 3110 3248 . - 2 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 2718 2810 . - . ID=g7219.t1.exon4;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 2718 2810 . - 1 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 2306 2408 . - . ID=g7219.t1.exon5;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 2306 2408 . - 1 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 2030 2141 . - . ID=g7219.t1.exon6;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 2030 2141 . - 0 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 1681 1849 . - . ID=g7219.t1.exon7;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 1681 1849 . - 2 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 956 1196 . - . ID=g7219.t1.exon8;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 956 1196 . - 1 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 365 544 . - . ID=g7219.t1.exon9;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 365 544 . - 0 ID=cds.g7219.t1;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . exon 133 237 . - . ID=g7219.t1.exon10;Parent=g7219.t1 NODE_520_length_21918_cov_42.5231 . CDS 133 237 . - 0 ID=cds.g7219.t1;Parent=g7219.t1;3_prime_partial=true #PROT g7219.t1 g7219 MAEPSSTPAAAGSSDSPALTITLKTGKWADEEDSAPSTPAPDAKSNADEALAKQVDSLAIAKVDPEDDDADAGGIDLTNKKYAGGGLIDWSGEVQVQQSDPNSPLYSVTSFEELNLRPELLKGVYAMKFNKPSKIQEKALPMILRNPPQNFIGQSQSGTGKTAAFTLGMLSRIDESKEYPQALCLAPTRELARQIGDVVNQMKQFTGIKVTFAIKDAVVGGKITEQVIVGTTGTILEWITKRKFDPKTVNILVCDEADQMIDLQGMGDQSVRIKKLLRPDIQILLFSATFKPKVMEFAQRIVGPKANIICLKREELSLEGIKNYYLDCPNEQSKFPTLSDIYGLVSVGQVVIFCQKRETVNSLAAQMVRAGHKVSKLTGEQEAAERDRIIDDFREGKTKVLIATNVLARGIDVLQVNVVINYDLPLTKDNKIDFETYLHRIGRTGRFGRK # ORIGINAL: g7224.t1 original gene structure, not modified by PASA NODE_520_length_21918_cov_42.5231 AUGUSTUS gene 19806 21894 . + . ID=g7224;Name=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS mRNA 19806 21894 . + . ID=g7224.t1;Parent=g7224;Name=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 19806 19865 . + . ID=g7224.t1.exon1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 19806 19865 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 19948 20132 . + . ID=g7224.t1.exon2;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 19948 20132 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 20258 20456 . + . ID=g7224.t1.exon3;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 20258 20456 . + 1 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 20645 20689 . + . ID=g7224.t1.exon4;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 20645 20689 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 20857 21075 . + . ID=g7224.t1.exon5;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 20857 21075 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 21414 21770 . + . ID=g7224.t1.exon6;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 21414 21770 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS exon 21886 21894 . + . ID=g7224.t1.exon7;Parent=g7224.t1 NODE_520_length_21918_cov_42.5231 AUGUSTUS CDS 21886 21894 . + 0 ID=cds.g7224.t1;Parent=g7224.t1 #PROT g7224.t1 g7224 MPSVTESSAWKALEAHYREKASKWHMRDLFAADAKRFEKFSSVLDLKQDGDFLLDFSKNIITDETLALLLELARSSNVEGMRDKMFSGEKINLTEQRAVLHVALRNRGNAPIVVDGADVMPDVNRVLAQMRTFTESVRSGAWKGYTGKAITDIVNIGIGGSDLGPVMVTEALKPYAQEGLRVHFVSNIDGTHMAETLKKINSETALFIVASKTFTTLETITNAESAKAWFLATAKDPATVAKHFVALSTNKTAVSAFGIDTANMFEFWDWVGGRYSLWSAIGLSIALYIGMDAFEQLLDGAFAMDTHFCTAPLEHNLPVLMGIIGVWYNNFFGAQSLAILPYDQYLSRFAAYFQQQI* # ORIGINAL: g10216.t1 original gene structure, not modified by PASA NODE_2497_length_6062_cov_36.447 AUGUSTUS gene 2083 4030 . + . ID=g10216;Name=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS mRNA 2083 4030 . + . ID=g10216.t1;Parent=g10216;Name=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS exon 2083 2181 . + . ID=g10216.t1.exon1;Parent=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS CDS 2083 2181 . + 0 ID=cds.g10216.t1;Parent=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS exon 2658 3529 . + . ID=g10216.t1.exon2;Parent=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS CDS 2658 3529 . + 0 ID=cds.g10216.t1;Parent=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS exon 3724 4030 . + . ID=g10216.t1.exon3;Parent=g10216.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS CDS 3724 4030 . + 1 ID=cds.g10216.t1;Parent=g10216.t1 #PROT g10216.t1 g10216 MAGVLWLGYVDAPVGAKEDARLPYSTCKIGGVPIHAPLPDAYSDRRTLHLFSCKSAKCTQKAGGWTALRFSRGDAVQPAETSEFTETPLSDKQAVGVVTETALADEGVDFDAGFGGADWDDAAGDALGSPATASAPSNAASTNSGFDDIEALLALRDTKLGNAKKKETTKARPSKAKKGKEKEVIADSGMTAPGVPSFAPHYIALDAEPPSAAQGDDHVMGLIAEYESREGPLAQLMAGVGVDVGCAVDTNDESADAFEGNEDDAPGAAMGGVGGAVGGRVSAACSAPPPAEDHEYEASVARHGDKVFHRFAKRIERSPEQILRYQLNGVPLLITGDAEHALPDAIPGCDVCGGPRSFELQLVASIIPSLRPAENSQELPSSLDFGTVLVYTCQSPHCHAQPDAEGLTRHVREFVWVQPDADWVE* # PASA_UPDATE: g10217.t1, single gene model update, valid-1, status:[pasa:asmbl_4435,status:12], valid-1 NODE_2497_length_6062_cov_36.447 . gene 4312 5923 . - . ID=g10217;Name=g10217.t1 NODE_2497_length_6062_cov_36.447 . mRNA 4312 5923 . - . ID=g10217.t1;Parent=g10217;Name=g10217.t1 NODE_2497_length_6062_cov_36.447 . five_prime_UTR 5919 5923 . - . ID=g10217.t1.utr5p1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . exon 5722 5923 . - . ID=g10217.t1.exon1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . CDS 5722 5918 . - 0 ID=cds.g10217.t1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . exon 5320 5456 . - . ID=g10217.t1.exon2;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . CDS 5320 5456 . - 1 ID=cds.g10217.t1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . exon 4824 4970 . - . ID=g10217.t1.exon3;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . CDS 4824 4970 . - 2 ID=cds.g10217.t1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . exon 4312 4554 . - . ID=g10217.t1.exon4;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . CDS 4466 4554 . - 2 ID=cds.g10217.t1;Parent=g10217.t1 NODE_2497_length_6062_cov_36.447 . three_prime_UTR 4312 4465 . - . ID=g10217.t1.utr3p1;Parent=g10217.t1 #PROT g10217.t1 g10217 MHDEASTAKDFDADGFLKTGDIGKIDQDGFLRITGRIKELVITAGGENVPPVPIENAIKSEIPACSQTMVIGDARKFLTAILTLKCDVDDDGYPTDNLSAPAVQALKEAGINITSMSAALKDAKVLEHIEKGMERVNKRAVSNAQSIRKWTLLPTDFSIPGGELGPTLKLKRRVINKKYEREIEAMYAV* # ORIGINAL: g10215.t1 original gene structure, not modified by PASA NODE_2497_length_6062_cov_36.447 AUGUSTUS gene 240 1326 . - . ID=g10215;Name=g10215.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS mRNA 240 1326 . - . ID=g10215.t1;Parent=g10215;Name=g10215.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS exon 1186 1326 . - . ID=g10215.t1.exon1;Parent=g10215.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS CDS 1186 1326 . - 0 ID=cds.g10215.t1;Parent=g10215.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS exon 240 914 . - . ID=g10215.t1.exon2;Parent=g10215.t1 NODE_2497_length_6062_cov_36.447 AUGUSTUS CDS 240 914 . - 0 ID=cds.g10215.t1;Parent=g10215.t1 #PROT g10215.t1 g10215 MAKRAREDADGNDDDAVNSYVEGSIVRIFVENFITYDKSTFYPGPRLNVIAGPNGTGKSSVVCAIALGLGGSPQLLGRAKEISEYVKFGAERAKIEVELFKKGGNMRLRREITRRNNSSAWYINDESVTQKKVAEVVEQFGIQVDNKCQFLPQDMVVTFARLSPHELLKATEKAIGGSEMVRLHEVLIHRRSEEKALDSNRKVKQDDLDRLVQRNQLLRGEVDRFMDRQKRMERVGLMQKKKPWLKYEIKRGEYMQLKEDRQKVMQTYQAAE # PASA_UPDATE: g4086.t1, single gene model update, valid-1, status:[pasa:asmbl_5512,status:12],[pasa:asmbl_5513,status:12], valid-1 NODE_3070_length_4405_cov_35.5898 . gene 1759 3938 . - . ID=g4086;Name=g4086.t1 NODE_3070_length_4405_cov_35.5898 . mRNA 1759 3938 . - . ID=g4086.t1;Parent=g4086;Name=g4086.t1 NODE_3070_length_4405_cov_35.5898 . five_prime_UTR 3925 3938 . - . ID=g4086.t1.utr5p1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 3904 3938 . - . ID=g4086.t1.exon1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 3904 3924 . - 0 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 3693 3824 . - . ID=g4086.t1.exon2;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 3693 3824 . - 0 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 3229 3389 . - . ID=g4086.t1.exon3;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 3229 3389 . - 0 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 2926 3052 . - . ID=g4086.t1.exon4;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 2926 3052 . - 1 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 2401 2459 . - . ID=g4086.t1.exon5;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 2401 2459 . - 0 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . exon 1759 2164 . - . ID=g4086.t1.exon6;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . CDS 2011 2164 . - 1 ID=cds.g4086.t1;Parent=g4086.t1 NODE_3070_length_4405_cov_35.5898 . three_prime_UTR 1759 2010 . - . ID=g4086.t1.utr3p1;Parent=g4086.t1 #PROT g4086.t1 g4086 MSAKVVQLGRPVSGNNTSYKAGALQRDEGGKFRKRWCVLEGTTLTIYKDEKDAEQMLTIFAEDVVGTGRVPPEKLSDKGAAFAIETETPKAVHIFKCSSEDDAAAWAGAVRASFAKKVTQVNGASDFVAIESFVLKGIRVDGMVEPQVLARLSGEEKTRKTQDGRGWYCDRFLPVPDVVNLMVEYGWELNSASYGESVTPTERTAPCHMLMFSRARA* # ORIGINAL: g4085.t1 original gene structure, not modified by PASA NODE_3070_length_4405_cov_35.5898 AUGUSTUS gene 96 1028 . + . ID=g4085;Name=g4085.t1 NODE_3070_length_4405_cov_35.5898 AUGUSTUS mRNA 96 1028 . + . ID=g4085.t1;Parent=g4085;Name=g4085.t1 NODE_3070_length_4405_cov_35.5898 AUGUSTUS exon 96 699 . + . ID=g4085.t1.exon1;Parent=g4085.t1 NODE_3070_length_4405_cov_35.5898 AUGUSTUS CDS 96 699 . + 1 ID=cds.g4085.t1;Parent=g4085.t1 NODE_3070_length_4405_cov_35.5898 AUGUSTUS exon 873 1028 . + . ID=g4085.t1.exon2;Parent=g4085.t1 NODE_3070_length_4405_cov_35.5898 AUGUSTUS CDS 873 1028 . + 0 ID=cds.g4085.t1;Parent=g4085.t1 #PROT g4085.t1 g4085 HACAVSHAMYLFILKGNIGRFVGNDAELLGLFVACLCHDIDHRGTNNSFQKHARTPLAELYSTSVMERHHFNHTVNILHSEGHNIFARFSEGEFRLLLSTMEQAILATDIANFFTAWAELDKVVSGGTFSARNSHHRTLVRSIAMPCSDLSSMSKPWHMAKHTADIVYEEFFVQGDAEKALGFKVPDLLDRDKAGEIPQQQVGFIGGVVKPAFDLLSKVMPEVTPMLSGVANNLEQWTQVAAAGNYTVPRRH* # ORIGINAL: g12357.t1 original gene structure, not modified by PASA NODE_3943_length_2480_cov_25.9875 AUGUSTUS gene 116 2062 . - . ID=g12357;Name=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS mRNA 116 2062 . - . ID=g12357.t1;Parent=g12357;Name=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS exon 1982 2062 . - . ID=g12357.t1.exon1;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS CDS 1982 2062 . - 0 ID=cds.g12357.t1;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS exon 1116 1290 . - . ID=g12357.t1.exon2;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS CDS 1116 1290 . - 0 ID=cds.g12357.t1;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS exon 689 822 . - . ID=g12357.t1.exon3;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS CDS 689 822 . - 2 ID=cds.g12357.t1;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS exon 399 557 . - . ID=g12357.t1.exon4;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS CDS 399 557 . - 0 ID=cds.g12357.t1;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS exon 116 226 . - . ID=g12357.t1.exon5;Parent=g12357.t1 NODE_3943_length_2480_cov_25.9875 AUGUSTUS CDS 116 226 . - 0 ID=cds.g12357.t1;Parent=g12357.t1 #PROT g12357.t1 g12357 GKPLTDVDTVDSAMLTVGHVTIEKKDSIGSTSTSVSTTASHYSTRSASTPAERGATGLQNLGNTCFMNSGLQCLSNTPALCNYFLEGQHEVDLNVDNPLGMGGRLAKEYAGLVKDLWMGRQAYVTPYQFKRALGSFAPQFEGYAQHDSQELLAFLLDGLHEDLNRIRKKPYFEQKDSDDRPDQIVAEEMWSNHKKRNDSIIVDLFQGQFKSTLVCPECSK # ORIGINAL: g10577.t1 original gene structure, not modified by PASA NODE_179_length_33320_cov_40.9106 AUGUSTUS gene 24661 27456 . - . ID=g10577;Name=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS mRNA 24661 27456 . - . ID=g10577.t1;Parent=g10577;Name=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 27378 27456 . - . ID=g10577.t1.exon1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 27378 27456 . - 0 ID=cds.g10577.t1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 27018 27136 . - . ID=g10577.t1.exon2;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 27018 27136 . - 2 ID=cds.g10577.t1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 26497 26655 . - . ID=g10577.t1.exon3;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 26497 26655 . - 0 ID=cds.g10577.t1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 25763 26237 . - . ID=g10577.t1.exon4;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 25763 26237 . - 0 ID=cds.g10577.t1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 25402 25579 . - . ID=g10577.t1.exon5;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 25402 25579 . - 2 ID=cds.g10577.t1;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 24661 24793 . - . ID=g10577.t1.exon6;Parent=g10577.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 24661 24793 . - 1 ID=cds.g10577.t1;Parent=g10577.t1 #PROT g10577.t1 g10577 MATITVQLGQCGNQLGLELLDQLFKGGDAGVPERVPGFFRQMDTASVDGSTAAVTARAVMIDMEQKPMMDLVRREVERSDSHSGFLVLQSLAGGTGSGVGAFMTEALREEYGSAFIVNKVVWPFRSGEVIVQNYNALLTLAHLWRASDAVIAMENDAVHDTCVRRLGRKQTSIGDINSVMAHHLASVLLPAETCVNTGDATAASVPVGDPLGALCAHMCSHSDYRLLSLRTAPLMAEGSVAFSSFRWLPIVKSLRHMCVTGWHMDEGMERTAGALQAERCASAVVVLRGLDVGTSDVLSPSHFGDPSLYAQWNVRPLEVWRSSRKFGQYDMAGTLVRQPGYNGAYGHLSVSAFGSVDAIVIDVTLGYFTPGEANCKRVEH* # PASA_UPDATE: g10574.t1, single gene model update, valid-1, status:[pasa:asmbl_2652,status:12], valid-1 NODE_179_length_33320_cov_40.9106 . gene 7348 9366 . + . ID=g10574;Name=g10574.t1 NODE_179_length_33320_cov_40.9106 . mRNA 7348 9366 . + . ID=g10574.t1;Parent=g10574;Name=g10574.t1 NODE_179_length_33320_cov_40.9106 . exon 7348 7381 . + . ID=g10574.t1.exon1;Parent=g10574.t1 NODE_179_length_33320_cov_40.9106 . CDS 7348 7381 . + 0 ID=cds.g10574.t1;Parent=g10574.t1 NODE_179_length_33320_cov_40.9106 . exon 7456 8054 . + . ID=g10574.t1.exon2;Parent=g10574.t1 NODE_179_length_33320_cov_40.9106 . CDS 7456 8054 . + 2 ID=cds.g10574.t1;Parent=g10574.t1 NODE_179_length_33320_cov_40.9106 . exon 8272 9366 . + . ID=g10574.t1.exon3;Parent=g10574.t1 NODE_179_length_33320_cov_40.9106 . CDS 8272 9366 . + 0 ID=cds.g10574.t1;Parent=g10574.t1 #PROT g10574.t1 g10574 MLLTQYPTRTRRSIVDDGLLVATDVSAVADVSDASAELNPASVDVAYAEGAEDDVVATEVHVNPFPPHDPLTQRAQLNPSPHGFPSQGSIVDDGLLVATDVNAAIDVSDASAELNPASVDVVSAKGADDDEVATEVHVNPFPPHDPLTHRTQLNPSPHGFPSQGSIVDDGLLVATDVNAVVDVSDTSAELNPASVDVAYAEGAEDDEVVTEIAHINPSPHGFPSQGPIVDDGLLVATDVTAVADVSDASAELKAASVDVASAEGADDDEVATEVHVNPFPPHDPLMQRTQLNPFPHGFPSQGSIVTDGLLVATDVTAAADVSDASAELNPASVDVVSAEGADDDEVATEVHVNPFPPHDPLTQRAHINPSPHGFPSQGPIVDDGLLVATDVNAVADVSDTSAELKAASVDVASAEGADDDEVATEVHVNPFPPHDPLMQRTQLNPFPHGFPSQGSIVTDGLLVATDVTAAADVSDASAELNPASVDVVSAEGADDDEVATEVHVNPFPPHNPLTHRTQLNPSPHGFPSQGPIVDDGLLVAIAVGTVVAVGADVSVALRISSADDDKYVVVRGKHR* # ORIGINAL: g10576.t1 original gene structure, not modified by PASA NODE_179_length_33320_cov_40.9106 AUGUSTUS gene 13594 22694 . - . ID=g10576;Name=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS mRNA 13594 22694 . - . ID=g10576.t1;Parent=g10576;Name=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 22540 22694 . - . ID=g10576.t1.exon1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 22540 22694 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 20080 22039 . - . ID=g10576.t1.exon2;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 20080 22039 . - 1 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 19324 19788 . - . ID=g10576.t1.exon3;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 19324 19788 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 18762 18938 . - . ID=g10576.t1.exon4;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 18762 18938 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 17751 18227 . - . ID=g10576.t1.exon5;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 17751 18227 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 17163 17373 . - . ID=g10576.t1.exon6;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 17163 17373 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 16776 16854 . - . ID=g10576.t1.exon7;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 16776 16854 . - 2 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 16394 16535 . - . ID=g10576.t1.exon8;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 16394 16535 . - 1 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 15783 15935 . - . ID=g10576.t1.exon9;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 15783 15935 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 15189 15335 . - . ID=g10576.t1.exon10;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 15189 15335 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 14881 15028 . - . ID=g10576.t1.exon11;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 14881 15028 . - 0 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 14462 14584 . - . ID=g10576.t1.exon12;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 14462 14584 . - 2 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 14061 14190 . - . ID=g10576.t1.exon13;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 14061 14190 . - 2 ID=cds.g10576.t1;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS exon 13594 13783 . - . ID=g10576.t1.exon14;Parent=g10576.t1 NODE_179_length_33320_cov_40.9106 AUGUSTUS CDS 13594 13783 . - 1 ID=cds.g10576.t1;Parent=g10576.t1 #PROT g10576.t1 g10576 MIAICMKNSLQQPAVRDRKTLGLTDDFPCIIEDGSISMLQSPTRRRRRRWHGALCDAEIPRVCRAALATTAGMHAYCKTVHPPSSVNHCVRASFTSPTDTNLILAKGNVIEIYRLRSTVGADGASVASGSLDFVASYALCGHVDTMASVRIAGNLRDSLLLGFADAKLSVVDFAPSTNDIKTTSLHYFEEEAMKGGRRARVHLPIVRVDPEGRCAAMVAYGRKLIVLPFRQSNALDDEMAGGHQSHVVDLPQLDARIRRIVDIVFLHGYFEPTVLVAYEGLPTSSGRLAVRRDTCGVIAISLTVGQRTAQVIWAQEQLPYDVERVVPVQRPIGGVLVFCANSLIYCNQGLAPYGVSVNSMSAQSTSFPLVAQPGIVASLDSSYAVFLKSDQLLLSLRNGEIYSVRLVVDGRSVTSFAFAKVGASVLPSCLDVLAPGIVFIGSRVADSMLVGCSEVRAANTTGAANASVSGDADQDGHAAKRRRVDGGDAPDVVDVDMDEMAAIYGDDDDDLEYLFYRTGSNGGGGAGRVHPGGSVTLTLRVLDTLANFGAIGAIAMGEPAAPSAEYVRDATASAVDVDGRGLNAQQQQQQQQQQQQQQQQQQQQQQHRHQHNNRHQQQQQRQPQLPPKKKKPLLPSLAEIEMVACCGVGKNGSLVVLRQEIIPAVVTSFELPGATDVHAAVMQKTDGVTAGMTGILSISAGGNTMVLSTVDDVEQIDSSGFDTSTTPIALGNVGSGGFILCVYDKAIRVLRPDEAGVPQVVSQMSLADMGTVVNAHVCDPHAVVTMNDHTVLCVTVRVGGGRVEPELDVRRADSLGKDVRIARVFCDHAGVFVTHADLEAKRAREGSYWCGVARLNGTLDIFSVPELKLVYSATHVSSGAEVIADSVIQTNVMINSDDAQVADFAIIPLDPEMHRPYLVVALANGVVLAYEAFPFTRAPSHQGMDKAVDAYARLALRFRRMSLGDPATARVSASHIKPAVAVPADASLSSSSTSADAAAVAGSSPSLSPRTAASILRPFRSIGGYSGVFVCGERPIWLLMTARKELRVHKMCIDGHVTAFAPFHTASCPYGFIYATASGHIRICQLDASFSLDAHMPTRRIPLRSTPHTIDYHVTSKTYALLRSSKVVVTTKARVTNDETWKPVPLEKDARFPLPQEDQFELAILSQNSYATLHKFDFEPFERVASCVVANLKSTETVSGLKPYILAGTINVHGEDVTSRGRIVIFDVVEVVPDPDNPTSDRRLKVLFDEAQKGPVTALAELKGYIAAAIGQKILIYDFQNKESLVGVAFVDTQIYMSSLVSVKNFLVAADIQKSIVLLRFKVEQRQLTNVSRDFEDLPVVSAQFVVNGTSLAVLTTDTNRNAFVFSYDPENVESCGGQRLLRSADFHIGSMGTCSTRLASRFNPAVHVNIIGTADGSLIALAPVEEGLYRRLWMLQNKLVTGIPQHAGLNPKAYRLMKSSARLRNNAAKNVADGDLLCVYDTLGARDQRDLARQMGSDVDQLLTDITDMQLTVSGIF* # PASA_UPDATE: g10575.t1, single gene model update, valid-1, status:[pasa:asmbl_2654,status:12], valid-1 NODE_179_length_33320_cov_40.9106 . gene 9424 13013 . - . ID=g10575;Name=g10575.t1 NODE_179_length_33320_cov_40.9106 . mRNA 9424 13013 . - . ID=g10575.t1;Parent=g10575;Name=g10575.t1 NODE_179_length_33320_cov_40.9106 . exon 9622 13013 . - . ID=g10575.t1.exon1;Parent=g10575.t1 NODE_179_length_33320_cov_40.9106 . CDS 9622 13013 . - 0 ID=cds.g10575.t1;Parent=g10575.t1 NODE_179_length_33320_cov_40.9106 . exon 9424 9526 . - . ID=g10575.t1.exon2;Parent=g10575.t1 NODE_179_length_33320_cov_40.9106 . CDS 9424 9526 . - 1 ID=cds.g10575.t1;Parent=g10575.t1 #PROT g10575.t1 g10575 MTKLRAFFAVALALTFSPLGAKAWTNPCDPNPCLADEECVICLSGNCGSNYACISLTGPELASSSSEAYQPEPTDSPSPQAATPTASTTTSHHGDDGICAGNPCGAGSLCVVCIGGQCDRAFICVGDGPSTTLGVPPATPSISMAPTHSPTVPEDSPCDPNPCGDGDCVICMSGRCSTQPYVCIPPPSSSYAVYSTDAPEPSSTGEADAFSTSESTPTASTLFSTPFIATAAPTTALVDPCDPEPCARDEECVVCLSGLCRGNGYSCIQIAATASPSTTPAATSVPTPSPTATSSGASGDPCDPNPCQPGSECMFCLDDCAGGYVCVVQSSSSATPTPAAESTESAAMTPTAAPTAVTMPCDPNPCSPSEECAVCLSSNCGMSHICIPTESASSPSPMATADLSASSPPAPTSTPTPTESDDPCEPNPCGPTEVCVFCFAGCDGKYSCEPLSSTPTASQSPAPTSDYATPPPTDVLPSSSPAATPTASPSLSGDACDPNPCALGESCVYCLTGCDVTAFTCVAQLSSSSEVPGPTSTDAAAAPTSSAVDPCSANPCGVDSECVPCLSVRCGGSAYVCLPLPASPTPAPTSSGSSEVAEPTPTSTATPSSAEDPCNPDPCTSEHVCVVCLDNGCGSAFICMPTAESLVSSPVPTASATTTGTLDPCEPNPCVEGDACALCTTGCALPYVCVTPSSSVSAGTQSASASGFLPTGLPSSSVDSDEIVSTSAAPSATATANADPCHPNPCGDNEVCVYCIAGCANGYTCVGEATNSQSQSLSPTATVSGPNIPAMSTTYREAEPTASVHSTESSSHSESPCDPNPCGHDECILCMSGRCKGESYICSPHPTASASSSLLPSMENSPSPSVSASGRDAPCDPNPCGDDECILCIGGQCGGKSYICSSHTSSTSVVVSSAAPAPSSIGEVEGFSSTLPFPASSQYSSAYPTATVAAVVAVPFDDTSAQFGAFFVTPSLSTHFSQGGNTANVFAITATLTDGSQLPSFLFFNATSTELMGLVVSEDVGGMSLTVVIHAEGYGGLGASAALRIVFTPSGSADFAARFRMDGELSGFSLSRRLNFLNRLWELLLSTSVLSAGDIAGYFGGLHIPSKMRLLGLESGSIIAVMGIVDDTLTISDCDVGVDEHSAHCQFDSRGKCVGKRIHISLRT* # PASA_UPDATE: g10578.t1, single gene model update, valid-1, status:[pasa:asmbl_2656,status:12],[pasa:asmbl_2657,status:12], valid-1 NODE_179_length_33320_cov_40.9106 . gene 27914 31900 . + . ID=g10578;Name=g10578.t1 NODE_179_length_33320_cov_40.9106 . mRNA 27914 31900 . + . ID=g10578.t1;Parent=g10578;Name=g10578.t1 NODE_179_length_33320_cov_40.9106 . five_prime_UTR 27914 28287 . + . ID=g10578.t1.utr5p1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 27914 28428 . + . ID=g10578.t1.exon1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 28288 28428 . + 0 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 28562 28670 . + . ID=g10578.t1.exon2;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 28562 28670 . + 0 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 28773 28930 . + . ID=g10578.t1.exon3;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 28773 28930 . + 2 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 29187 29269 . + . ID=g10578.t1.exon4;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 29187 29269 . + 0 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 29528 31069 . + . ID=g10578.t1.exon5;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 29528 31069 . + 1 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . exon 31343 31900 . + . ID=g10578.t1.exon6;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . CDS 31343 31628 . + 1 ID=cds.g10578.t1;Parent=g10578.t1 NODE_179_length_33320_cov_40.9106 . three_prime_UTR 31629 31900 . + . ID=g10578.t1.utr3p1;Parent=g10578.t1 #PROT g10578.t1 g10578 MASREGSASSALGRLRITETIDDGRVNPDPLGDEDEFELEPENFLDNYISASKLKMMTGIDDLTKVTFLEMRVDTTENSLGDFGALLPTLVQLKLSNSIIASVRDLGTSLSHLKVLWMARCGLMELDGISSLGSLRELYLAFNLISELSPLTMLDELEVLDIEGNNVDDISQVEFLALCPSLTSLTIDSNPLTSSPKPAGVPPSPSYSPGAPYDYQAVVCKLLPRLQFLDDEPVNGHERPPQQHQHANNAGPRSAFSQKASPKQPAARPGSSMGDTPLDRFIVAEGIKNTVSLDVAGVDGIDPLTGLPSRSKTPTRGRPGSSMGVRPGTSLGGRPGTSLGGRPGTSLGGRPGTSLGGRPGTSLGGRPGTSMGRVTAFGRDEGDGDDDSDDGSSNLTHGVDGVLCGNPVMALRARRARAASEEPDEPPSNATDALHPTPQQGATSAPGKAHSSNARVTSAVRKMDLDASTGSARGFDMRDSSMSPSALSGSVRAERLDDIFEELRAWREQFRDYKPTDLESPSDDDDGDDGDGGDSDDDAGRARFEARLAEAAAASSSSAGTGTGAPSMGMRSPPSPTLVARSPAGAGFLQKRNSLTQAQEPPSTPPHVVLGSSPTSQGMGTNLLGMRPLGSIPVSNGTGHVMQVSPTPPSLSRPRTAPSNNVRRRIHMRATEDYTLPGGSESLGNSPLQRPPQSNRPPEATPQRPLSVPSARPRVLGKIKAPPTPGERDDKRAALRAAGPIVAGSTEGHRIVRFDNPRPVTAFGSAADYEEY* # PASA_UPDATE: g10573.t1, single gene model update, valid-1, status:[pasa:asmbl_2649,status:12],[pasa:asmbl_2650,status:12], valid-1 NODE_179_length_33320_cov_40.9106 . gene 2211 7312 . - . ID=g10573;Name=g10573.t1 NODE_179_length_33320_cov_40.9106 . mRNA 2211 7312 . - . ID=g10573.t1;Parent=g10573;Name=g10573.t1 NODE_179_length_33320_cov_40.9106 . exon 2211 7312 . - . ID=g10573.t1.exon1;Parent=g10573.t1 NODE_179_length_33320_cov_40.9106 . CDS 2384 7312 . - 0 ID=cds.g10573.t1;Parent=g10573.t1 NODE_179_length_33320_cov_40.9106 . three_prime_UTR 2211 2383 . - . ID=g10573.t1.utr3p1;Parent=g10573.t1 #PROT g10573.t1 g10573 MSEAASSSQVEPTTSDILVLQSSSPATVAPSSVDSDRPASSSESISTDTTTSTAAAKESHNTVSATIEFASELSSSVVASASSADEGESSAIDGRGTSTSGVVPEASSSASPTPAVSVAATASSSNKVSSSVFVEINSSSARDGSQSSSATSVTVSNIAESLTSTASAFGDTSQSTEIPSPISTHVPLSVDISATNSASDLGSGVPTESASESASESASDHMTESASNHMTESASPTESASENASESASDHLTESVSHTGLASDHVSESASLSESASDHMTESASPTESASESASESASDHITESASPTKSASENASESASDHMTESASPTQSASENASESASVRVTESASPTESASENASESASDRMTESTSPTESASENASESASDRVTESASPTESASENASESASDRMTESTSPTESASENASESASDHLTESASPTESASENASESASEHMTQSASQTESASESASGSASEHMTESASPTKSASENSSESASKHMTESVSLTESASESASESTSEHMTESASPTESASENASESASDHMTESASPTESASENASESASEHMTESASQTESASESASESASDHMTESASESASESASDHITESASPTESASDHVTETASGNPTESASDITTDSVTETSSSVEESSESSATDLDATQTATDDSESVSTSASRSSPFLLQSTSAFTSSNAATSSRVSASTNGATASAKAGTTATTVKASTTSVKAATTAKVVTTTVKAATTTVKAATTTVKAATTTVKGATTTGKAATTVKSSTPAVKPATSVKAASTTVKVASATVRPATTTAKAATTVRASSAAQVATPSVRGATTTVKPATSTAKAATTAKAVATTARVGTTVQAATTTKAATTFRAATSTVRGVSTTAKVATTTAKAAIPTTAAASTTLAPVTSTPVPQLTPLPEPSAACAAAGTAGTPAALPEVVGMCGGNFSGSISSSVFSGQSVFTISLRFRATSPDGTILSITGGTVDSILILLDKSGSVFASINYGTGVVKATVPGPFHTGDWNLVTLSSNAGSFTLTVGSASATSGQSSSRGLDLLSTVTSSFDGCLNLLQLRNRRWSDVTITKWTGASTTCCNCRASSDLCTSNGGPWENAPQTLPSTVGMCAGTDAVTATFPSTILNGDSTFTVKVGFRATLPGGTILALTGSASDGLYIGLTGTGDLIATANYGVGDVSATLNGPFNDGVLRDVTVRTRAGAIDVTVGSSTVTSPRSTRTSMEGVTTLRIQLQGCVSVRSINGATSEQFNVATWMLAQSTCCNCAVLSPLAVPVTATCPSTDNGFFSTGKPTRLPATIGMCSGGRVAASTTSFLAGKKSFSITLTFRTKNANGQVLSLTGSQSDSILLALEKGKLVLRVDYGVGQVSASLTGPFNNGVAHAVEISSAAGVATLRVGTRTASSTQSSAQVVEFLNQLEVKMEGCVNITKLNTITPTSLTLTTWVGASTSCCGCNATCKADTSNPEVLPEVLSVCEGGRVTASSPLSRISKSSFVLRFTTYDGNGTIFGLFDSTSTEFVSVQHVNGQVVASANFGAGVFSAIATGPATDDGAEHSVRVDVALGAVTVVVDGGVAATSPSSTVSRTITGIQTALIDIHGCVQVVQVDDFVASDFSVLTYSKTSAYQCTAS* # ORIGINAL: g1964.t1 original gene structure, not modified by PASA NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS gene 7774 8700 . - . ID=g1964;Name=g1964.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS mRNA 7774 8700 . - . ID=g1964.t1;Parent=g1964;Name=g1964.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS exon 7774 8700 . - . ID=g1964.t1.exon1;Parent=g1964.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS CDS 7774 8700 . - 0 ID=cds.g1964.t1;Parent=g1964.t1 #PROT g1964.t1 g1964 MAVMAQGDYGTVYATKHEQMTSDWSRLCKFVETAEPTQGIDWDECYERVLRVARTEIAWSPSATKVMIMIGDATPHPIISSRNEGNIDWRLEATAIADLGIHFYSVQALGDHQSEHEFWQPLAQLTRGQYLKLDQFAHTTDYVTAICYHRQPALLETFRAEVEQSGRMNRSLHGMFNSLLGRSTAFVGGGGEVGLQPVPPSRFQVLEVTSAESLKQFTIDNGLTFKVGRGFYEFTKPEVISERKEVVLMDRVSGDMFTGQEAIDLISAGGKQKIRPTALVKWRVFVQSTSTNRKLVPGSGFLYEVEMA* # ORIGINAL: g1963.t1 original gene structure, not modified by PASA NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS gene 5798 7565 . + . ID=g1963;Name=g1963.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS mRNA 5798 7565 . + . ID=g1963.t1;Parent=g1963;Name=g1963.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS exon 5798 6279 . + . ID=g1963.t1.exon1;Parent=g1963.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS CDS 5798 6279 . + 0 ID=cds.g1963.t1;Parent=g1963.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS exon 6746 7565 . + . ID=g1963.t1.exon2;Parent=g1963.t1 NODE_1689_length_9715_cov_22.5397_potentialcontaminant AUGUSTUS CDS 6746 7565 . + 1 ID=cds.g1963.t1;Parent=g1963.t1 #PROT g1963.t1 g1963 MTGRPQLRNIHVEYSHKQSQHPSNAVPADAIVAFLTGPTPAYPLAVTSWRDKFALALDSLMGRSRVVLVCPEPYDRNWSSAYKDQLRWEHDWLERADIILFWHETRWTPDANTLVNCYHGPDQANIGIQFRFEVGMYIGDKRKVRIFYVPPHAQGVARVECLPNALVARGDHSLDSPPHSLVALGETCSVQLCDEIGKGAFGIIYRGVDPYGLYAVKTYTDVGMNCSWQIERRVVGLLLSEKPAHLVGVRGIIESPPMIVFDLCDGDIFATRLRMNLNQIRQAIRSAVAGLAFLEKHKIVHCDVKLENILYINTSYFLTDFGLALDWYSEIVRFRGTLPMIPPEMFGPSAHIIIDGRIDSWAVGILTAELLSGKLLKENAYSDISRDNLVQDMTQTIDKNVRTDAVEFLNTCFASVNVRPLPSRLLEMPFLTW* # ORIGINAL: g870.t1 original gene structure, not modified by PASA NODE_235_length_30004_cov_40.9401 AUGUSTUS gene 27552 29871 . - . ID=g870;Name=g870.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS mRNA 27552 29871 . - . ID=g870.t1;Parent=g870;Name=g870.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 29715 29871 . - . ID=g870.t1.exon1;Parent=g870.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 29715 29871 . - 0 ID=cds.g870.t1;Parent=g870.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 27552 29425 . - . ID=g870.t1.exon2;Parent=g870.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 27552 29425 . - 2 ID=cds.g870.t1;Parent=g870.t1 #PROT g870.t1 g870 MEAAGAGGRELVFQTGPGNAWLARAYAQASPYPHASVIAQEIFQSGIIPSDTDFRIYRDFGNLPGIDMAFIANGYVYHTALDTPDRIQPGCMQRCGENVLATVRNILDNRHLSSPLPIALVGGKAHPEDDEGSLVYYDFLGLATLVYSGTIARIVNFATIVFATAALWSLGELHSRTLRGLGVTLLSLVVALVTPVAVAVALKLVLAPMPWFTHQSIAAGLYGVPALLAVASVHILLLGTTPSSTRRKDTPHSPTPELDSFAGGLVFWLILLCGATALDIGSGYLALFWVLPPVAGRLAMRRLRTGSAGVYWAVALASLLMPMLLTSQLLVAMFDFFIPLMGRSGTLVPSDVVVSVLSGASVFLLMSVPIAFTHSLRWRRGVAAVLLFSFLACVVFAAVTPRYSHDRPKRVFLQHIQREAYDIRGRRTQRDAGVWMISFDSSANEPLLSAHPNFESARKVKCDSTNSDVYCGFPWYFPMRYMVGETLYAVTPSPVHEDHDTRNQAESVPQVAIKLVRDEYDEATQRRRVHFALTGSDHVTLYIDASNPKSQLTAWSFADDVTPLYGDDCHFVFLSSGESAYSFSRARDNQMSPSARDLVPGSLLPVGVDAASTPTDSPLTTWEFWLEKKGRDSTFIFAAGAHHLTAQTSELLAVMSALPAWTHPLGWVTTYASWVF* # PASA_UPDATE: g868.t1, single gene model update, valid-1, status:[pasa:asmbl_4133,status:12], valid-1 NODE_235_length_30004_cov_40.9401 . gene 16784 23842 . - . ID=g868;Name=g868.t1 NODE_235_length_30004_cov_40.9401 . mRNA 16784 23842 . - . ID=g868.t1;Parent=g868;Name=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 23764 23842 . - . ID=g868.t1.exon1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 23764 23842 . - 0 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 23077 23404 . - . ID=g868.t1.exon2;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 23077 23404 . - 2 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 22669 22813 . - . ID=g868.t1.exon3;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 22669 22813 . - 1 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 22324 22478 . - . ID=g868.t1.exon4;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 22324 22478 . - 0 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 20557 21956 . - . ID=g868.t1.exon5;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 20557 21956 . - 1 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 19392 20318 . - . ID=g868.t1.exon6;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 19392 20318 . - 2 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 18344 19072 . - . ID=g868.t1.exon7;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 18344 19072 . - 2 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 18029 18198 . - . ID=g868.t1.exon8;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 18029 18198 . - 2 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 17751 17783 . - . ID=g868.t1.exon9;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 17751 17783 . - 0 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 17410 17566 . - . ID=g868.t1.exon10;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 17410 17566 . - 0 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . exon 16784 17276 . - . ID=g868.t1.exon11;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . CDS 17029 17276 . - 2 ID=cds.g868.t1;Parent=g868.t1 NODE_235_length_30004_cov_40.9401 . three_prime_UTR 16784 17028 . - . ID=g868.t1.utr3p1;Parent=g868.t1 #PROT g868.t1 g868 MERRPVAVAWSLLRILLFAATALVWRDAHATHNRGGYALLFDSKNADIASPILGAMGTGFPQSALTIEFWVRIVDMYNYNTVVAYSAFDPSVTPPYDQANELTLGFAGSHIYFWKSGQNYLCTTLNNVSCALSIGWTHYAVTWEGATGSVILYRNGETISAAVMGSDEWKAPIRQPGCFMLGQELDAFCGDVDESQSLGGAIDEFRLWNYARTPAQVRSNFRRALHSEDGLIANFNFDVYDNVIRDETGVKVLVGRSPDRKNELTYSSDRSPRAPTKPTRAISGAPLIGGGLSVAVVPQHVSNYSLVVSELTLSGINVTQLPTLGRLVLGSNPSVDVVAGANVSMEAFFLYIPSASFRVSPDGDSIAYITYDINNASGPVTGAVVRMVSQTYATAPNVTVTTAEDTILALVLGSSSIDAPSLRVRIVSLPTRGRLFAAQFLPSNTDSYESLDRNASRLVEIVSPQWVDNPRGVVMYTPPLDLHSPDADTPLASFTYAYEDQGVLSPAATVNIIVNFVNDAPVGVSANTTLSERGPFTISLAWTDVDVNFSPRKYFRIVDAPRLGRLYQSDDAVDADGRRFGRGEEIVVGQGLPLEFQHAHALLGTSKACGGSCESGPQNVLGKPDVYPKYGTSELSWQPRPSDGEAAFVELEYLQAVFPKMVDIYETLNPGKVVRVSTATTYNGTATQWAVLWSGDAQSAQQGLSRSFEPPLCPSFLPSRFVRIDLSVDDRTGIDSIVLNGVQSQPEALVYSAAGLVTYVPAAGIFRASGFDSLSFVVSDCEGESQSAHITIHRPLPPVLLDGGEYFLDTAVSVSVDGTTGLGELSLAFDPVVADALARFPRIAVNGSVQLSSVTIVLVGNMTAGLEVGVDGAVGWEGIRTPMLLTAADYAIGVNTAGIARGMPTAAATLVVDVEVGGYTYRMRLRMSASLSSQSASSSDGRRILSIALGLGIGGGLFALICVALGAIVLRGKRIGASLRDMESKMRSVIEYSELEFFRPLGAGTFGVVYLGRYRGTSVAIRCISPPGSDDKNKPNMAPSEGMLPMHSSACSDGSLDGGPNASSLTSSDTHAHLLAPGTAEPWSPTCSSFDDPILMSRTGAAGNGGAGAGAKSLNASEHTGRPILSESTSGRRTGLHRIEMSVLRKNMANALRQINNHGQNHNVAEKTAARTSAEIFEGITSIHTSRDSATSADSASFARSLITSGLWRLVPGSRRGSMAKVPSLSTALSCGEEFTAEVEMVCALRHPNLVLFMGFCASPLRCFVTELMDLGSLSRLLEDRSVMFDDARRIQCARQAARGMLYLHSASPPIKHGNLKAANLMVDSHWVIKVADFGMHSLVRDGLPSTRLGTMLWTAPEVLRGIGFTRSSDCYSFGITLWEIYERAIPFKSCDIMDEELFGRIIDGTLRPSVSSSWTPEMVSLMQDCWSQEPDMRPPFSEIQWRLEAIRILPQAAQP* # ORIGINAL: g869.t1 original gene structure, not modified by PASA NODE_235_length_30004_cov_40.9401 AUGUSTUS gene 24747 26453 . + . ID=g869;Name=g869.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS mRNA 24747 26453 . + . ID=g869.t1;Parent=g869;Name=g869.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 24747 24845 . + . ID=g869.t1.exon1;Parent=g869.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 24747 24845 . + 0 ID=cds.g869.t1;Parent=g869.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 25308 26453 . + . ID=g869.t1.exon2;Parent=g869.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 25308 26453 . + 0 ID=cds.g869.t1;Parent=g869.t1 #PROT g869.t1 g869 MSTSTSVSPALLYVPPAGSLLMAWEVKEQRQPRNGVDRAQLFEIDHNRLTHHLGVSSQAHRDAILGAVRALKRASTAPNPAVNCLDTRGTPTESKALSQRQAHSTAAKQAAPQHASVGADVHAHAVPPAVPVPSVDGAQMAQLSTASAGLPGAGIATPQRSLSTAAEQQPGSVGVGVRMRPNYFLSFRISDASIHSAMRSLQDYVLSRCADLAPTFISPVKLHISAFVLALNSKEEIERASSLLRECRSLVQAHYPSDRPSISFPKLGSFGSEVLYLEPAEDEATTRLKAFVADVAVLFRNGGFALESMGNRPGFVPHATVMKLAQAKGKFRSPRRRGGNSGAGKRDDAPDSGESRRRAAPRLKIAPEYYRGHGIAHFGTEVFDAIELLSMQGKAPDGYYEMIERVAFGARVRG* # PASA_UPDATE: g865.t1, single gene model update, valid-1, status:[pasa:asmbl_4137,status:12],[pasa:asmbl_4138,status:12], valid-1 NODE_235_length_30004_cov_40.9401 . gene 7149 12038 . + . ID=g865;Name=g865.t1 NODE_235_length_30004_cov_40.9401 . mRNA 7149 12038 . + . ID=g865.t1;Parent=g865;Name=g865.t1 NODE_235_length_30004_cov_40.9401 . five_prime_UTR 7149 7559 . + . ID=g865.t1.utr5p1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 7149 7642 . + . ID=g865.t1.exon1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 7560 7642 . + 0 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 7788 8099 . + . ID=g865.t1.exon2;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 7788 8099 . + 1 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 8464 8526 . + . ID=g865.t1.exon3;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 8464 8526 . + 1 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 8713 8995 . + . ID=g865.t1.exon4;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 8713 8995 . + 1 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 9273 9365 . + . ID=g865.t1.exon5;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 9273 9365 . + 0 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 9533 9614 . + . ID=g865.t1.exon6;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 9533 9614 . + 0 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 9895 10221 . + . ID=g865.t1.exon7;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 9895 10221 . + 2 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 10425 10535 . + . ID=g865.t1.exon8;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 10425 10535 . + 2 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 10706 10756 . + . ID=g865.t1.exon9;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 10706 10756 . + 2 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 10927 11484 . + . ID=g865.t1.exon10;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 10927 11484 . + 2 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . exon 11683 12038 . + . ID=g865.t1.exon11;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . CDS 11683 11921 . + 2 ID=cds.g865.t1;Parent=g865.t1 NODE_235_length_30004_cov_40.9401 . three_prime_UTR 11922 12038 . + . ID=g865.t1.utr3p1;Parent=g865.t1 #PROT g865.t1 g865 MATHNGHQLPNSHVSFLGYVRNEETAFKVFAEARKGGCRLVTYRLRDVLFGPGEGYVYDSSSSEIQRWTDPYDWGETHHTDSRYLLFYRQANVVVDPLTGAKRKVERETGLRKKIMADPHSNLRLINYYTDSYVASNGNDDIYFVPPSQAAQRHGNAKEMLATRLLKRHKDSSMASPSPSPSPSISPMTPVSVLNGGPLDDGHHQPLVLQNADLQRLQRTIAMTYARNPSAENWTPQAMAQRMGPLETATVPRRMQGAKRMRSQSESDLSKTFAPPIKTENTFSWQDLDAQGLIDWHQAAQLLAQAPVLNATRSHKLMAPTRGKSFYVDDNPMHPPAQPSLGHVMGGPVGPSMQMHAQQQHQQHQQQLQHQQQFQQQQQQQQQLHQLQQQMNMQMQQHHVQPSAVDYSGWDPLAELHADTQRTHVPNQMLAGRHRSRSCNDLTAMFSVEDILSNLAESLVTPDGTFVGDIPYGAGHLGGVQQHSQGVTDGLAGQGYAVGAGGGSLPIGGFDDPILAEFLARSAVSAQGVHQQQQSYAPIGGSQHLYPEMGNDSSFGNLLFGQSGAGLDQSGLEGDMYSLGGVPNFQYGQSSSASQPQPDTGSKKRTFARAARTVTCSGDLAAAVSAPMMSTLDPPHARTTVQAGGGAQFYAGVIDPSGLGAFDGDIDTWDVTHRMSSLELLEGMAGSHGMHAQPQPHISHLAGYNRIQQQPQQQQQQQQQQQQSLQRQQQRRQ* # PASA_UPDATE: g867.t1, single gene model update, valid-1, status:[pasa:asmbl_4132,status:3], valid-1 NODE_235_length_30004_cov_40.9401 . gene 14849 16582 . - . ID=g867;Name=g867.t1 NODE_235_length_30004_cov_40.9401 . mRNA 14849 16582 . - . ID=g867.t1;Parent=g867;Name=g867.t1 NODE_235_length_30004_cov_40.9401 . five_prime_UTR 16283 16582 . - . ID=g867.t1.utr5p1;Parent=g867.t1 NODE_235_length_30004_cov_40.9401 . exon 16198 16582 . - . ID=g867.t1.exon1;Parent=g867.t1 NODE_235_length_30004_cov_40.9401 . CDS 16198 16282 . - 0 ID=cds.g867.t1;Parent=g867.t1 NODE_235_length_30004_cov_40.9401 . exon 14849 15710 . - . ID=g867.t1.exon2;Parent=g867.t1 NODE_235_length_30004_cov_40.9401 . CDS 15220 15710 . - 2 ID=cds.g867.t1;Parent=g867.t1 NODE_235_length_30004_cov_40.9401 . three_prime_UTR 14849 15219 . - . ID=g867.t1.utr3p1;Parent=g867.t1 #PROT g867.t1 g867 MSFVRPLVRTVAPALRCQSRAWTAAPLRAFATVTHIRVSMMAPRASSSLLLSRQYTVGTGTHTERPASESSSDPYERARLVEQEKIPTYLAEPYDDFKEYFADTLPSPEELTERQAMADRILDISETGKAPPPELMKEIVDMLIRRGDSSGLRAVIEAILEYHVDVEPGLVELAQDAITRLSYESLKSETI* # PASA_UPDATE: g866.t1, single gene model update, valid-1, status:[pasa:asmbl_4131,status:3], valid-1 NODE_235_length_30004_cov_40.9401 . gene 12111 13488 . - . ID=g866;Name=g866.t1 NODE_235_length_30004_cov_40.9401 . mRNA 12111 13488 . - . ID=g866.t1;Parent=g866;Name=g866.t1 NODE_235_length_30004_cov_40.9401 . five_prime_UTR 13419 13488 . - . ID=g866.t1.utr5p1;Parent=g866.t1 NODE_235_length_30004_cov_40.9401 . exon 13397 13488 . - . ID=g866.t1.exon1;Parent=g866.t1 NODE_235_length_30004_cov_40.9401 . CDS 13397 13418 . - 0 ID=cds.g866.t1;Parent=g866.t1 NODE_235_length_30004_cov_40.9401 . exon 12111 13155 . - . ID=g866.t1.exon2;Parent=g866.t1 NODE_235_length_30004_cov_40.9401 . CDS 12170 13155 . - 2 ID=cds.g866.t1;Parent=g866.t1 NODE_235_length_30004_cov_40.9401 . three_prime_UTR 12111 12169 . - . ID=g866.t1.utr3p1;Parent=g866.t1 #PROT g866.t1 g866 MGDPTVNLLGMAVPIKYLSLLVLVVQNTSLVLLMRYSRTVDGPMYISSTAVVMAEVMKLATCLAIIVKEQGGISGLVRTLQDDIIGKPRETLMVGVPALLYTIQNNLLYVAVSNLEAATFQVTYQLKILTTAVFSVFMLSKHLSGLKWLSLVILTAGVTIVQIDPTKAAAAVGPEQNAMLGFAAVVAACISSGFAGVYFERILKNTTASIWLRNVQLGLAGAVLGFVGVLYNDREAVAEDGFFQGYTWIVWLVIATQAVGGLVVAIVVKYADNILKGFATSVSIILSSVVSMALFGFRPTLQWMGGAGLVLTATYLYSKPDAPSGQPILPNSARK* # PASA_UPDATE: g863.t1, single gene model update, valid-1, status:[pasa:asmbl_4136,status:12], valid-1 NODE_235_length_30004_cov_40.9401 . gene 3275 4958 . + . ID=g863;Name=g863.t1 NODE_235_length_30004_cov_40.9401 . mRNA 3275 4958 . + . ID=g863.t1;Parent=g863;Name=g863.t1 NODE_235_length_30004_cov_40.9401 . five_prime_UTR 3275 3322 . + . ID=g863.t1.utr5p1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . exon 3275 3828 . + . ID=g863.t1.exon1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . CDS 3323 3828 . + 0 ID=cds.g863.t1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . exon 4099 4266 . + . ID=g863.t1.exon2;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . CDS 4099 4266 . + 1 ID=cds.g863.t1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . exon 4420 4549 . + . ID=g863.t1.exon3;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . CDS 4420 4549 . + 1 ID=cds.g863.t1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . exon 4762 4958 . + . ID=g863.t1.exon4;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . CDS 4762 4920 . + 0 ID=cds.g863.t1;Parent=g863.t1 NODE_235_length_30004_cov_40.9401 . three_prime_UTR 4921 4958 . + . ID=g863.t1.utr3p1;Parent=g863.t1 #PROT g863.t1 g863 MASLLNLARVAALSPAVARAFSTSGAAAAPIKHVTVFGGGLMGAGIVQVSAVSGHHVTLVDVTEAAVQRGKAQLEGDLKRAAKKASGGDEAKAAAFVKDAFSRISFSTDGEAAVKQTDLVVEAIVENLEVKRQLFARLDKAAPAHTIFASNTSSLPIQDMASATKREDRFGGLHFFNPVPVMQLVEVVKATKTSDATFKSLMDFGTAVGKKSVACKDTPGFIVNRLLVPYMMEAIRMFERGDASTEDIDAGMKLGAGYPMGPFELLDYVGLDTCKFIVDGWAKSYPNEPAFKPSPLLSKLVADGKFGRKSGEGFYKYSKK* # ORIGINAL: g862.t1 original gene structure, not modified by PASA NODE_235_length_30004_cov_40.9401 AUGUSTUS gene 984 2879 . + . ID=g862;Name=g862.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS mRNA 984 2879 . + . ID=g862.t1;Parent=g862;Name=g862.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 984 2048 . + . ID=g862.t1.exon1;Parent=g862.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 984 2048 . + 0 ID=cds.g862.t1;Parent=g862.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 2211 2879 . + . ID=g862.t1.exon2;Parent=g862.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 2211 2879 . + 0 ID=cds.g862.t1;Parent=g862.t1 #PROT g862.t1 g862 MASATAAPAAGGHHSGADSAHRNAMGTAQPNNSNPTHTNTSNSNSSSNSNSTATINAAGGGGTGANGPKLASQARALIAAGRLDDALRMCNIAVDASRDSAHDPEGKSRGGLDADGSAVLLCDCAAAMQMAGRPVDALACVRRAIEFQPTAHARSRACVLLDAITGATDPHAAQSMSMRELANRRADAHAAKEEGNRLYRVGRLEEAIDWYTYAIDLDGIDVTFYTNRAAAYLERGLFYASVVDCRKALQLAELRYPGTSPAVLAKAHSRMATGLARLGRTAEAVASYRASLAVADNEDVRRRLTAALASTPNTPWGEVPHEGEGASSGKDAVLMRAAAAMDGQEERATGDLLFKEGKYEDAIRHYDVALRRDMHGAISDRHLVHVCRALAFSAVGRRTDAMDACDAAIAADPGQPEGYLVKSDLLASAKPGGGRAALQVLLGVYSVWPTELTDHLARRMRHALVTCLRQDRELMQTDTPQAHARLARDWAHARSLRQIKEVQTAARDPRILALAIRLVRSDAVAVIESLGDDMCDIIALLCRLCIAKYISLFPTTKDNRVLFVDGIMTWRLQTTNL* # ORIGINAL: g864.t1 original gene structure, not modified by PASA NODE_235_length_30004_cov_40.9401 AUGUSTUS gene 5270 6607 . - . ID=g864;Name=g864.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS mRNA 5270 6607 . - . ID=g864.t1;Parent=g864;Name=g864.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS exon 5270 6607 . - . ID=g864.t1.exon1;Parent=g864.t1 NODE_235_length_30004_cov_40.9401 AUGUSTUS CDS 5270 6607 . - 0 ID=cds.g864.t1;Parent=g864.t1 #PROT g864.t1 g864 MDATPSPHTAGHGHSHGAVEPASRRNAGPTARPGYVLCPLCTASVKIEDAKAHYNAELVRLRDPAAAVALARNGADASLAVGKRGAALHARRLVHSQALQLRSNGLRVRDKPDEEFDAQMAIADGSAGTVSPSLAKGQEVLRRVRRNRRERTDARGSGGPAGRRRRSAPSSAWADADAMGNEVVPRCPICADIMRGDEADINAHIDGCLANGGASSVARSDAGNGSAALAGGAVAAAGAASGTPGMDDGERPYEVYTWAGQTRVRASTLVVGGLANAAAGVHSSGSSSLKSGAKRPRVDSDEEADIDVDDDSTAQYGEAQYGESAIVRLETAEDGAVAPLPPVAPERESAPELDGGAMASTGSSAAVVIASLKSRIRELEGASMSPGQGTPRCLICMERYTQPLVSVLCWHVHCERCWLQTLGVKRLCPQCNTITAPPDLRKIYL* # ORIGINAL: g1167.t1 original gene structure, not modified by PASA NODE_3692_length_2936_cov_26.8239 AUGUSTUS gene 124 1227 . + . ID=g1167;Name=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS mRNA 124 1227 . + . ID=g1167.t1;Parent=g1167;Name=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS exon 124 264 . + . ID=g1167.t1.exon1;Parent=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS CDS 124 264 . + 1 ID=cds.g1167.t1;Parent=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS exon 650 983 . + . ID=g1167.t1.exon2;Parent=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS CDS 650 983 . + 1 ID=cds.g1167.t1;Parent=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS exon 1207 1227 . + . ID=g1167.t1.exon3;Parent=g1167.t1 NODE_3692_length_2936_cov_26.8239 AUGUSTUS CDS 1207 1227 . + 0 ID=cds.g1167.t1;Parent=g1167.t1 #PROT g1167.t1 g1167 WTGPTRSSLLDFNGTAVNTSVVTSLSTFPLNGASPVTVNITSHLFDKDVVMRVSNRTFPVEIGSAFVTVGITGWPFLDPANMLAVYVDLTTSSSKGPSRDIVPLEDDRVRYFFDQTGFVELGGTSLVDGMLAPIVRGLSTATYVESVLVTLPRFWKAEGRCSHN* # PASA_UPDATE: g8190.t1, single gene model update, valid-1, status:[pasa:asmbl_4165,status:3], valid-1 NODE_2370_length_6529_cov_50.311 . gene 4175 6239 . - . ID=g8190;Name=g8190.t1 NODE_2370_length_6529_cov_50.311 . mRNA 4175 6239 . - . ID=g8190.t1;Parent=g8190;Name=g8190.t1 NODE_2370_length_6529_cov_50.311 . five_prime_UTR 6119 6239 . - . ID=g8190.t1.utr5p1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . exon 5962 6239 . - . ID=g8190.t1.exon1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . CDS 5962 6118 . - 0 ID=cds.g8190.t1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . exon 5566 5852 . - . ID=g8190.t1.exon2;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . CDS 5566 5852 . - 2 ID=cds.g8190.t1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . exon 5153 5384 . - . ID=g8190.t1.exon3;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . CDS 5153 5384 . - 0 ID=cds.g8190.t1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . exon 4175 4856 . - . ID=g8190.t1.exon4;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . CDS 4645 4856 . - 2 ID=cds.g8190.t1;Parent=g8190.t1 NODE_2370_length_6529_cov_50.311 . three_prime_UTR 4175 4644 . - . ID=g8190.t1.utr3p1;Parent=g8190.t1 #PROT g8190.t1 g8190 MALPQIVLRDGTRLHVVDMFASFDEALLSQFYHNIMKPNFPIADELDAFETWVESLDPALKHLADPLDPHFHVLLALDCPETSSKDMASVEKGSVTEPLFDARTCVVKGGLVCEYYPGSCCALASYAVVADSVRGKGIQRHLFDQALKILGNYETGCDLFLAETNCIGVDDGVMESATRHTALHRLGFRGLDFAYAQPPLKEGTDWVKDLVLLVHHTTIGSAVVDGKRVIASSRVRTFLADFFRVLGATENDNEKSRHMFERQFGWLATHDGVPLIEEPPWLITAAVPSPSPSPL* # PASA_UPDATE: g8189.t1, single gene model update, valid-1, status:[pasa:asmbl_4163,status:12],[pasa:asmbl_4164,status:12], valid-1 NODE_2370_length_6529_cov_50.311 . gene 855 3299 . - . ID=g8189;Name=g8189.t1 NODE_2370_length_6529_cov_50.311 . mRNA 855 3299 . - . ID=g8189.t1;Parent=g8189;Name=g8189.t1 NODE_2370_length_6529_cov_50.311 . five_prime_UTR 2996 3299 . - . ID=g8189.t1.utr5p1;Parent=g8189.t1 NODE_2370_length_6529_cov_50.311 . five_prime_UTR 2445 2746 . - . ID=g8189.t1.utr5p2;Parent=g8189.t1 NODE_2370_length_6529_cov_50.311 . exon 2996 3299 . - . ID=g8189.t1.exon1;Parent=g8189.t1 NODE_2370_length_6529_cov_50.311 . exon 855 2746 . - . ID=g8189.t1.exon2;Parent=g8189.t1 NODE_2370_length_6529_cov_50.311 . CDS 1269 2444 . - 0 ID=cds.g8189.t1;Parent=g8189.t1 NODE_2370_length_6529_cov_50.311 . three_prime_UTR 855 1268 . - . ID=g8189.t1.utr3p1;Parent=g8189.t1 #PROT g8189.t1 g8189 MAPRQQTFKAVGLTVHANHSVGISYFTSDGGHFKRVILNTVPAHLRLSIVAPLQSDGVVHKELLACLTCLAASPPTVTLVVGSSAANHARIHGPPTPCPVPDCSSMFPQPQAVPRHIRTMHGIDVPVVDQKHGVVKKEGRSKRESKFRKIVKAEVDALPQKWARQVPIKGEIKEEEKPAVGMFATDKQMSLLSCAPKFEEVGRKDVTMEPTMCCLPKHKMETPHVDGQACASKSETDSEESIEQMWDEIAPQMSAPVVSNTVLVASASATSNVCADRDDPFENPHLCFEAAPGHISALGQDYSGHCLVYPKWPATSTATVDGCLADLQNSVLGGLHHGQMFNVEVIELTSPRDGPAASIARPSTITAANTAVANMGALEREVRQAAKALAW* # ORIGINAL: g1140.t1 original gene structure, not modified by PASA NODE_1623_length_10150_cov_39.969 AUGUSTUS gene 5467 10150 . - . ID=g1140;Name=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS mRNA 5467 10150 . - . ID=g1140.t1;Parent=g1140;Name=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 8541 10150 . - . ID=g1140.t1.exon1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 8541 10150 . - 1 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 8185 8318 . - . ID=g1140.t1.exon2;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 8185 8318 . - 2 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 7724 7878 . - . ID=g1140.t1.exon3;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 7724 7878 . - 0 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 7318 7420 . - . ID=g1140.t1.exon4;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 7318 7420 . - 1 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 6941 7072 . - . ID=g1140.t1.exon5;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 6941 7072 . - 0 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 6708 6802 . - . ID=g1140.t1.exon6;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 6708 6802 . - 0 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 6257 6426 . - . ID=g1140.t1.exon7;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 6257 6426 . - 1 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 5912 6027 . - . ID=g1140.t1.exon8;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 5912 6027 . - 2 ID=cds.g1140.t1;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS exon 5467 5580 . - . ID=g1140.t1.exon9;Parent=g1140.t1 NODE_1623_length_10150_cov_39.969 AUGUSTUS CDS 5467 5580 . - 0 ID=cds.g1140.t1;Parent=g1140.t1 #PROT g1140.t1 g1140 LHLLYSSIANNSASLGGVSLVDDASYLELGSTSVRNCSSDSSAGGILAGIQSTVEVRNCNDISQNDALENGGFISAINDAVVRIEKSSLVSCTAGQSGGAISANGNAKVTVVASNFTNSFAGSDGGAFVLAGTAQLSLDNTRLVGNEGAIGGGISAMFKSSLSVVNSVFSSNTGSAMGGAVAIEDSVKFTLNNSRIDQNMAKFGQGGGICLRGYPNVLINGSTFSNNTALFGAGVSAESTLDNARNADTRNQTFALSIRSTSFIVNRATLTVDGALGRGGAMYVSGGRTFILEDTRFVDNKAESSGGGVYYSAGEAGSGTASEIHFSSALFTGNNAGARGGAAFVDESVISNVTFGAVSMQSNSAGDAGGAVFLGNNMKAEPEGLVGVIKSANTAGSWGGDFTGPGATLTVTALSGESSLMYYSGESLPEISVNLLDRYNKPANVTGSEAEVYVRLIGADGVLRNVSIDNSDKRNLDGGKVSFRNLAVFAAPGAYRLVFGITKLSASGEVSLVVGDCLASGSRTLYGPVSRQTCVQVFQEKSGLRSAFIALAALGEVFAIGLGVVVVLLREHEVIKAASPLFCLIVIGGCSVALSVIFSLAPTASNSTCIANIWLGHLAFAITFGALFAKNYRIMSIFNNKKMRQRLRATSDSFLLSLIGAAVGVVILYLIIWCAVDAPKKDADFDLSKNVVTYVCSSHSSVWAFALYAVEGMSLLGGVFLAYKTKKVPSKFNESKYIAFSIWNITVIAIIILPLNYTIDQSNPDTQFLFTSLGLFIATIGVLCLIFIPKLHAYRKGELARTQSSMQTTTDSSLVISETPVNMVLIENKFRDEISNLQAKYDKAVEENMQLWQENDSLRKKNGSFTGTRVSKPSA* # PASA_UPDATE: g1139.t1, single gene model update, valid-1, status:[pasa:asmbl_2182,status:3], valid-1 NODE_1623_length_10150_cov_39.969 . gene 438 4022 . + . ID=g1139;Name=g1139.t1 NODE_1623_length_10150_cov_39.969 . mRNA 438 4022 . + . ID=g1139.t1;Parent=g1139;Name=g1139.t1 NODE_1623_length_10150_cov_39.969 . five_prime_UTR 438 574 . + . ID=g1139.t1.utr5p1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . five_prime_UTR 740 867 . + . ID=g1139.t1.utr5p2;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 438 574 . + . ID=g1139.t1.exon1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 740 987 . + . ID=g1139.t1.exon2;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 868 987 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 1210 1299 . + . ID=g1139.t1.exon3;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 1210 1299 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 1527 1629 . + . ID=g1139.t1.exon4;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 1527 1629 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 1823 1998 . + . ID=g1139.t1.exon5;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 1823 1998 . + 2 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 2534 2617 . + . ID=g1139.t1.exon6;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 2534 2617 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 2921 3023 . + . ID=g1139.t1.exon7;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 2921 3023 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 3301 3386 . + . ID=g1139.t1.exon8;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 3301 3386 . + 2 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . exon 3796 4022 . + . ID=g1139.t1.exon9;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . CDS 3796 3861 . + 0 ID=cds.g1139.t1;Parent=g1139.t1 NODE_1623_length_10150_cov_39.969 . three_prime_UTR 3862 4022 . + . ID=g1139.t1.utr3p1;Parent=g1139.t1 #PROT g1139.t1 g1139 MLLLLFDRSVTVLARCGIERVKTSLPHVYELAAGGTAVGTGLNTYVGFDTSVASEVAAITGLPFVTAPNKFEALAAHDALVQLSGSLNTVAVSLMKIANDLRLLGSGPRCGLGELLLPENEPGSSIMPGKVNPTQCEALTMVCAEVMGNHFGVTVGGMNGHFELNVFKPIIIHNVLRSIRLLGDASRSFTKNCVVGIEPNRKRLNAIMNESLMLVTALNPKIGYDAAAKTAKLAHKEGLTLKEAALRLKLLTEEEFDRLVRPELMLGPEKYVPKK* # ORIGINAL: g12988.t1 original gene structure, not modified by PASA NODE_4491_length_1547_cov_32.4185 AUGUSTUS gene 1192 1476 . - . ID=g12988;Name=g12988.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS mRNA 1192 1476 . - . ID=g12988.t1;Parent=g12988;Name=g12988.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS exon 1192 1476 . - . ID=g12988.t1.exon1;Parent=g12988.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS CDS 1192 1476 . - 0 ID=cds.g12988.t1;Parent=g12988.t1 #PROT g12988.t1 g12988 MERNRLRREEGGNVRASQSAGFGATVGNGMGETTATATAASKSTAEQRPNAYLPEDDADLPIPRPYGSHAPFKPTETGATMRHFRKPTVKPIEI* # ORIGINAL: g12987.t1 original gene structure, not modified by PASA NODE_4491_length_1547_cov_32.4185 AUGUSTUS gene 135 698 . - . ID=g12987;Name=g12987.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS mRNA 135 698 . - . ID=g12987.t1;Parent=g12987;Name=g12987.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS exon 507 698 . - . ID=g12987.t1.exon1;Parent=g12987.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS CDS 507 698 . - 0 ID=cds.g12987.t1;Parent=g12987.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS exon 135 302 . - . ID=g12987.t1.exon2;Parent=g12987.t1 NODE_4491_length_1547_cov_32.4185 AUGUSTUS CDS 135 302 . - 0 ID=cds.g12987.t1;Parent=g12987.t1 #PROT g12987.t1 g12987 MDQASLARRINVESERVRQKAAELLRISLVRCVAGQLVSPAAEAARPACCLELAAKMMAEPFDRALAIRFSGVTQKMYLQAMDALESLFDLKKKFSVAELAVQFGCAEALPHLSKRFDE* # PASA_UPDATE: g13736.t1, single gene model update, valid-1, status:[pasa:asmbl_4796,status:12], valid-1 # PASA_UPDATE: g13736.t2, single gene model update, valid-1, status:[pasa:asmbl_4795,status:12], valid-1 NODE_2684_length_5456_cov_35.1381 . gene 97 2548 . + . ID=g13736;Name=g13736.t1 NODE_2684_length_5456_cov_35.1381 . mRNA 97 2548 . + . ID=g13736.t1;Parent=g13736;Name=g13736.t1 NODE_2684_length_5456_cov_35.1381 . five_prime_UTR 97 98 . + . ID=g13736.t1.utr5p1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . exon 97 258 . + . ID=g13736.t1.exon1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 99 258 . + 0 ID=cds.g13736.t1;Parent=g13736.t1;5_prime_partial=true NODE_2684_length_5456_cov_35.1381 . exon 735 889 . + . ID=g13736.t1.exon2;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 735 889 . + 2 ID=cds.g13736.t1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . exon 1041 1253 . + . ID=g13736.t1.exon3;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 1041 1253 . + 0 ID=cds.g13736.t1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . exon 1554 1735 . + . ID=g13736.t1.exon4;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 1554 1735 . + 0 ID=cds.g13736.t1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . exon 1971 2015 . + . ID=g13736.t1.exon5;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 1971 2015 . + 1 ID=cds.g13736.t1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . exon 2255 2548 . + . ID=g13736.t1.exon6;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . CDS 2255 2366 . + 1 ID=cds.g13736.t1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . three_prime_UTR 2367 2548 . + . ID=g13736.t1.utr3p1;Parent=g13736.t1 NODE_2684_length_5456_cov_35.1381 . mRNA 97 2548 . + . ID=g13736.t2;Parent=g13736;Name=g13736.t1 NODE_2684_length_5456_cov_35.1381 . five_prime_UTR 97 98 . + . ID=g13736.t2.utr5p1;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . exon 97 258 . + . ID=g13736.t2.exon1;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 99 258 . + 0 ID=cds.g13736.t2;Parent=g13736.t2;5_prime_partial=true NODE_2684_length_5456_cov_35.1381 . exon 735 889 . + . ID=g13736.t2.exon2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 735 889 . + 2 ID=cds.g13736.t2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . exon 1041 1253 . + . ID=g13736.t2.exon3;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 1041 1253 . + 0 ID=cds.g13736.t2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . exon 1554 1735 . + . ID=g13736.t2.exon4;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 1554 1735 . + 0 ID=cds.g13736.t2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . exon 1971 2015 . + . ID=g13736.t2.exon5;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 1971 2015 . + 1 ID=cds.g13736.t2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . exon 2252 2548 . + . ID=g13736.t2.exon6;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . CDS 2252 2366 . + 1 ID=cds.g13736.t2;Parent=g13736.t2 NODE_2684_length_5456_cov_35.1381 . three_prime_UTR 2367 2548 . + . ID=g13736.t2.utr3p1;Parent=g13736.t2 #PROT g13736.t1 g13736 QIPLWWSAIAMDMSFALLAPLFLSKFYASGGRRLALSIEHHAERYGLFVLIVLGESVNAALYANEGTVDKRLLTAVFGLLTAYNFESLYYDVDGSRQYQHALRRSILTAVAWNWFHIPLLMALILAGSSLHGLVNATDGPGHVPADDSAIVMQRRLFCGGYAIAVFCLAVMGMCHKNMESAGTVCRSHISKKYRITARIVVSVVLAAVCSTSAHQIQPLALVSIVTAASTALVAFEIFGKRPVSTNCDVLKSGDDASIDDSGRSHSETERLNPTDGDSSSYGAVNKSH* #PROT g13736.t2 g13736 QIPLWWSAIAMDMSFALLAPLFLSKFYASGGRRLALSIEHHAERYGLFVLIVLGESVNAALYANEGTVDKRLLTAVFGLLTAYNFESLYYDVDGSRQYQHALRRSILTAVAWNWFHIPLLMALILAGSSLHGLVNATDGPGHVPADDSAIVMQRRLFCGGYAIAVFCLAVMGMCHKNMESAGTVCRSHISKKYRITARIVVSVVLAAVCSTSAHQIQPLALVSIVTAASTALVAFEIFGKRPVSTNCDVLKSSGDDASIDDSGRSHSETERLNPTDGDSSSYGAVNKSH* # PASA_UPDATE: g13737.t1, single gene model update, valid-1, status:[pasa:asmbl_4798,status:3], valid-1 # PASA_UPDATE: g13737.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4797,status:12], valid-1 NODE_2684_length_5456_cov_35.1381 . gene 3048 5271 . - . ID=g13737;Name=g13737.t1 NODE_2684_length_5456_cov_35.1381 . mRNA 3048 5271 . - . ID=g13737.t1;Parent=g13737;Name=g13737.t1 NODE_2684_length_5456_cov_35.1381 . five_prime_UTR 5237 5271 . - . ID=g13737.t1.utr5p1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 5226 5271 . - . ID=g13737.t1.exon1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 5226 5236 . - 0 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 5024 5108 . - . ID=g13737.t1.exon2;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 5024 5108 . - 1 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 4739 4806 . - . ID=g13737.t1.exon3;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 4739 4806 . - 0 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 4228 4325 . - . ID=g13737.t1.exon4;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 4228 4325 . - 1 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 3961 4094 . - . ID=g13737.t1.exon5;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 3961 4094 . - 2 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 3639 3706 . - . ID=g13737.t1.exon6;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 3639 3706 . - 0 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . exon 3048 3263 . - . ID=g13737.t1.exon7;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . CDS 3182 3263 . - 1 ID=cds.g13737.t1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . three_prime_UTR 3048 3181 . - . ID=g13737.t1.utr3p1;Parent=g13737.t1 NODE_2684_length_5456_cov_35.1381 . mRNA 3048 5218 . - . ID=g13737.t1.1.5b6be70b;Parent=g13737;Name=g13737.t1 NODE_2684_length_5456_cov_35.1381 . five_prime_UTR 5141 5218 . - . ID=g13737.t1.1.5b6be70b.utr5p1;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 5024 5218 . - . ID=g13737.t1.1.5b6be70b.exon1;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 5024 5140 . - 0 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 4739 4806 . - . ID=g13737.t1.1.5b6be70b.exon2;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 4739 4806 . - 0 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 4228 4325 . - . ID=g13737.t1.1.5b6be70b.exon3;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 4228 4325 . - 1 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 3961 4094 . - . ID=g13737.t1.1.5b6be70b.exon4;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 3961 4094 . - 2 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 3639 3706 . - . ID=g13737.t1.1.5b6be70b.exon5;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 3639 3706 . - 0 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . exon 3048 3263 . - . ID=g13737.t1.1.5b6be70b.exon6;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . CDS 3182 3263 . - 1 ID=cds.g13737.t1.1.5b6be70b;Parent=g13737.t1.1.5b6be70b NODE_2684_length_5456_cov_35.1381 . three_prime_UTR 3048 3181 . - . ID=g13737.t1.1.5b6be70b.utr3p1;Parent=g13737.t1.1.5b6be70b #PROT g13737.t1 g13737 MFKKFDAKESIASTSLVKSSVQRGIRSSILEQMPGLEDVIDDILPKKQNIHLAKCSDHVSIVTVNNELLFFQQRDGPYFPTLRLLHKYPHILPHEQVDKGAIRFILSGAQIMCPGLTSPGAKMTPVPTNTPVAIMCEGKEHAIAIGLTKMSTDDIAKINKGIGVDNIHFLNDGLWNAKIDG* #PROT g13737.t1.1.5b6be70b g13737 MCVFYSAQHTRFDAKESIASTSLVKSSVQRGIRSSILEQMPGLEDVIDDILPKKQNIHLAKCSDHVSIVTVNNELLFFQQRDGPYFPTLRLLHKYPHILPHEQVDKGAIRFILSGAQIMCPGLTSPGAKMTPVPTNTPVAIMCEGKEHAIAIGLTKMSTDDIAKINKGIGVDNIHFLNDGLWNAKIDG* # ORIGINAL: g3104.t1 original gene structure, not modified by PASA NODE_19180_length_162_cov_41.8276_potentialcontaminant AUGUSTUS gene 2 162 . + . ID=g3104;Name=g3104.t1 NODE_19180_length_162_cov_41.8276_potentialcontaminant AUGUSTUS mRNA 2 162 . + . ID=g3104.t1;Parent=g3104;Name=g3104.t1 NODE_19180_length_162_cov_41.8276_potentialcontaminant AUGUSTUS exon 2 162 . + . ID=g3104.t1.exon1;Parent=g3104.t1 NODE_19180_length_162_cov_41.8276_potentialcontaminant AUGUSTUS CDS 2 162 . + 0 ID=cds.g3104.t1;Parent=g3104.t1 #PROT g3104.t1 g3104 NADFAASVARVSATSVAQQSASSVASVASVAAAVSASAAAANADFAASVARVS # ORIGINAL: g4877.t1 original gene structure, not modified by PASA NODE_1304_length_12279_cov_40.0057 AUGUSTUS gene 899 4941 . - . ID=g4877;Name=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS mRNA 899 4941 . - . ID=g4877.t1;Parent=g4877;Name=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS exon 3048 4941 . - . ID=g4877.t1.exon1;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS CDS 3048 4941 . - 0 ID=cds.g4877.t1;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS exon 1815 2827 . - . ID=g4877.t1.exon2;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS CDS 1815 2827 . - 2 ID=cds.g4877.t1;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS exon 1123 1555 . - . ID=g4877.t1.exon3;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS CDS 1123 1555 . - 0 ID=cds.g4877.t1;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS exon 899 981 . - . ID=g4877.t1.exon4;Parent=g4877.t1 NODE_1304_length_12279_cov_40.0057 AUGUSTUS CDS 899 981 . - 2 ID=cds.g4877.t1;Parent=g4877.t1 #PROT g4877.t1 g4877 MASGGGGRRPSSAPTGLTINNSISNNGANTMQSHLSSNARSKSNGSAHSGVQSSYSRNLPPSSQMGEDAQVALGTSDDTELSMIIEALGNDDFGSAPVSPNPPPPPNVKPPALQYNAQQPQTHVSGVHSHASSGTQRNPQQQLQQQQQHTPQQQHYGGQSANSYPPLRTPLDASSARPNSPWLLSQTSAVRHVSPQPHLVPSTPLTNVHPGQQSPAWGASGHAASDPNVGRGGQMHPQQHTAVQRTVADAASQLPGRTMGGGPVPAQRTYSSLSRGSSPGPTADVDEMRRRLEEVVREKITREGEIRILRENIAQQEAASREQVTALHRLREEQNAREDAIRKQLGEQITLMKREMDGLHSQLAFKVDEAKEAEKTCRSLEQKLRVYERSTQSQISQTPVANAGRGGTYSASTHAGFDDTDDFFTLATSTPTQHVATGKRKHGEMAMDAAMKSPRAFATPAHRPILQQPVPLVGGGIQQGANVVASTTAVRSDADAATNCTSHADDVSLTHTRKLLAGLVGLQRMLDVTDPSAGEEGSPCAAVAETLALLGRREAVAYRPLLSLGAGALSDSPLGFNTGAAARQRGSDGLPVHLGAVGVEPTVGAYIALLECAVLDPHTGISAARALDLLTGLASSCPSVRARLCRDRSPAFRFSQSIHDIGGGSSNNNANERDNSPPALPRDGFPALLSRPGSRLVVADAAWLEAHGIRQPHCAPRDEHVGSSTDAMDVDGNLATQQYSARQDMSSSPPPLDFARMLIERLRSLHLNASAAAGAVAGHVSAGLPRGERQNSTAVALHRAGHSALPTARSDAGVTSSAAAHVPLVRSAFRLFGCLAGDLDEAHFTALLSIVGPRGSVHPRTILPSDDPLTCEGTLSLMCRCVAVGSCGVETILLPHGAGHVQGERRAKAVAPGCIIDPVARLLAGANMTPMSGRRDHVRLLAVRLLGALSRSGGESVMLSGNECVCGMKLINHIVAFLTSEINVLKLRLARYGHESEPSAMEPSLSPHTSPPLLAVPRELRGRHATQQSDAVFDVLDHAAGIESTGECGVSAVGDTMASLVGPALREGAILLATLALSTACRQEHTAHVRSQVVVLAADLVKIFARAGLVEAEEHARDLLELWLPECAEAVGGGDSMETG* # PASA_UPDATE: g4878.t1, single gene model update, valid-1, status:[pasa:asmbl_1154,status:12], valid-1 NODE_1304_length_12279_cov_40.0057 . gene 5880 10515 . + . ID=g4878;Name=g4878.t1 NODE_1304_length_12279_cov_40.0057 . mRNA 5880 10515 . + . ID=g4878.t1;Parent=g4878;Name=g4878.t1 NODE_1304_length_12279_cov_40.0057 . exon 5880 6881 . + . ID=g4878.t1.exon1;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . CDS 5880 6881 . + 0 ID=cds.g4878.t1;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . exon 7250 9724 . + . ID=g4878.t1.exon2;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . CDS 7250 9724 . + 0 ID=cds.g4878.t1;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . exon 9956 10515 . + . ID=g4878.t1.exon3;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . CDS 9956 10138 . + 0 ID=cds.g4878.t1;Parent=g4878.t1 NODE_1304_length_12279_cov_40.0057 . three_prime_UTR 10139 10515 . + . ID=g4878.t1.utr3p1;Parent=g4878.t1 #PROT g4878.t1 g4878 MFSSFFGGAGNSSQDPPKARRSIDISGPSEFRHVTHVGPAPLATHSDAGEDGDAPSSLPPATDGQAPQGKQVRARTESKRSQSSPALSLGDIAVESDSTPPPADDPQPKRPQSVRVTPQQIDEILRGNQLVGGSDSSGNSPSDVHLRQLRKWQFVNPPTWDALEKETTDAKPEDVFRLLRIAMGGVPSWCSHVGSDGSKSRRRLCEQFGLLVPAVRSAVLAQSEVARVRLDSIASILTVDGAGASTTAPASPSRRESVAVTAEGQASLDAGNASKGEDAWQVVSERTEEDVTEVHADTAEDVDSDDGADSDVLNSGDVTGEMGIQILSAAGLKPGDKDTQMWVEMRMYNGLHVISERGKVRTAKVPSNAYPKWNELLGCGLRVRSIPRAARLCITVCEGVHYNNATPLGWANVPMYDCDGYLRAGQLTLSLWPGQKAAPYGSPCMNPEADAPKLQISIPDFGTPVDGGRHMRVVYAQPWWAEKITPAHSLDNLNSIPSMVSLDGRTETYRESTCSVTSGTSFTSTGGGGGAQSPMKRSVSDENMLPPTAEDEDGAAATGTADEDDCEDPSRVFRCDPRDRRSLPMLGATTTPDELHAAVDAITSVAEEGADGNAGASRSRAQSRAAQGKGVVASEVTEAPHASAETTTPLAAASAASSRASSISTGSTHAPPVHQRSATLPDLNPDTLRKAAAMAGANQDDIANTARSGNGADDLIEFLRNTRWSDKDAVRLAHNRLAASRHLASSSADNAPAGSGPRLSPSSALGLLGGNCPDEVVREFATRVVSRLDDSDFVDYSMYLVQALKFETHHDSSLARLLLMRAVASEKVAERVFWYLRAESTGPIFGERYALLLEMLLRLIPKDSLITIFKQVDTLRELEFVAETIKTVRSNMRYPAVVGMLQKVRFPPAFTLPIESGGVTFEGAHTGDCRVMDSKKLPLWLALQPSGEPDQKYIAILKCGDDLRQDMVALQIIRLMDRLWRNARLDLRIVTYDCLATSVVNGGSGLIQAVRKASTLANIQKAVGGSTAVFKEETLSLWLRQQNPEEQQLRTAVENFTLSCAGYCVATYVLGIGDRHNDNIMLTNDGRLFHIDFGHILGNIKRKFGIKRERTPFILTTDFVNVMSMGKGEGGFTKFLIFSCEAFMILRKNADLILNLLSLMIASGLPELRNEEDIAYVRHVLLLNYSDQEALAKFQGAVAECLKSEWSTHLNWYIHNLKH* # ORIGINAL: g2167.t1 original gene structure, not modified by PASA NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS gene 6847 9399 . - . ID=g2167;Name=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS mRNA 6847 9399 . - . ID=g2167.t1;Parent=g2167;Name=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 9245 9399 . - . ID=g2167.t1.exon1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 9245 9399 . - 0 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 8941 9031 . - . ID=g2167.t1.exon2;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 8941 9031 . - 1 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 8607 8783 . - . ID=g2167.t1.exon3;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 8607 8783 . - 0 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 8310 8395 . - . ID=g2167.t1.exon4;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 8310 8395 . - 0 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 7908 8104 . - . ID=g2167.t1.exon5;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 7908 8104 . - 1 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 7447 7624 . - . ID=g2167.t1.exon6;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 7447 7624 . - 2 ID=cds.g2167.t1;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 6847 7228 . - . ID=g2167.t1.exon7;Parent=g2167.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 6847 7228 . - 1 ID=cds.g2167.t1;Parent=g2167.t1 #PROT g2167.t1 g2167 MRSCVVLERGDIAGGASGGNSGIVHTGYDAPPGSIEWQFMRHSHAITEQTYKSLGLPYEDVGCLVVAWSDAEVEALRGVLHKAHTNGVLEARWVDTSELHSMEPQLSTKSLAAVLVPGESLVDPFLSVLTLARDADAHGAHFVRHTEVVSAEREGALWTLTTAPNGLQIRTRHVVNCGGNHGDTVERRSGRTPSFTIHPRKGEFAVFGRDCGLALRHVICPVPTDRTKGVFVFRTVYGHTLAGPTAVDQEDRDCATADASSVALLTDRARDMFPVLAGVEPIGAYAGIRPATEHRDYQLAHSDNDQWTTVGGIRSTGLTSSLALGRHVIGLVTRAHASRDAVLTPSSPLSKTAKIQTSLGGVEGNGRGEDCDTTSNNVTVAAGTLRDGRIFVGGGLGWVAVAHPIAQYGWEGLEAVALCPL* # ORIGINAL: g2165.t1 original gene structure, not modified by PASA NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS gene 240 2941 . - . ID=g2165;Name=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS mRNA 240 2941 . - . ID=g2165.t1;Parent=g2165;Name=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 2875 2941 . - . ID=g2165.t1.exon1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 2875 2941 . - 0 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 2494 2720 . - . ID=g2165.t1.exon2;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 2494 2720 . - 2 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 2025 2181 . - . ID=g2165.t1.exon3;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 2025 2181 . - 0 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 1278 1673 . - . ID=g2165.t1.exon4;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 1278 1673 . - 2 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 899 1118 . - . ID=g2165.t1.exon5;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 899 1118 . - 2 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 579 724 . - . ID=g2165.t1.exon6;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 579 724 . - 1 ID=cds.g2165.t1;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS exon 240 384 . - . ID=g2165.t1.exon7;Parent=g2165.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant AUGUSTUS CDS 240 384 . - 2 ID=cds.g2165.t1;Parent=g2165.t1 #PROT g2165.t1 g2165 MAKSFALVALAVACFLGTAYATNIQMSSHMLGQNLSPAVNTDFVGAAYFTYDSNSLVLFPTFVWTNVTAANITEIAVYQSAGNSSTNGNSTQLFSLTTGQPPNLELVNNAAFGPLSREQEQALLEGQMFVLVKSVQNPNGELKGDILVDILQEFSGKLLPTNTTQSTTERTVCSFIYSNITGQLQPTRFFSTVPLDQITSIAIVNTQSSSNTTSNSTSASVLFDVAKASAALNEFNGNIANLSQIFNLNAGDSQNLYAQNLACQVTLSSGEIWQGPLQYVEKECAFTSHLVSFNPNTSRDGLAITYFNNVTEELHIQFIDSRIPRQNVTSVELLQGQASANSNGSVFYSWDSANNILNSSVPFDQFVGLNQTLETALFTGDVGALIKTTGVPKGELGGQLLRPQVIEFYAVLNSSNALPANASTGTNATVLTGILYAVFDNVSHVIVVETLR # PASA_UPDATE: g2166.t1, single gene model update, valid-1, status:[pasa:asmbl_2433,status:3], valid-1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . gene 4789 6127 . - . ID=g2166;Name=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . mRNA 4789 6127 . - . ID=g2166.t1;Parent=g2166;Name=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . five_prime_UTR 6064 6127 . - . ID=g2166.t1.utr5p1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . exon 5828 6127 . - . ID=g2166.t1.exon1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . CDS 5828 6063 . - 0 ID=cds.g2166.t1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . exon 5547 5696 . - . ID=g2166.t1.exon2;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . CDS 5547 5696 . - 1 ID=cds.g2166.t1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . exon 5351 5443 . - . ID=g2166.t1.exon3;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . CDS 5351 5443 . - 1 ID=cds.g2166.t1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . exon 4789 5164 . - . ID=g2166.t1.exon4;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . CDS 4969 5164 . - 1 ID=cds.g2166.t1;Parent=g2166.t1 NODE_1717_length_9537_cov_41.0523_potentialcontaminant . three_prime_UTR 4789 4968 . - . ID=g2166.t1.utr3p1;Parent=g2166.t1 #PROT g2166.t1 g2166 MHITSFVTLSLSFLLGCVLISTPCATGNEPPQASSHATRMFRALQAASAQAHRAFSTSSTKMGLESATFAAGCFWGTERYFKKQFKDGISNLRVGYTGGPTDKAPSYEDVCTGRTGHAEAATFQYDTDKVKYEDLVLYFFRFHDPTTLNQQGNDRGTQYRSAIFYHTPEQKRIAEEVKAKAQSKWKQPIITDISAAVKFFNAEDYHQEYLDRNPTGYCNHRLYW* # PASA_UPDATE: g4829.t1, single gene model update, valid-1, status:[pasa:asmbl_7011,status:12], valid-1 NODE_4139_length_2133_cov_30.6064 . gene 393 1902 . + . ID=g4829;Name=g4829.t1 NODE_4139_length_2133_cov_30.6064 . mRNA 393 1902 . + . ID=g4829.t1;Parent=g4829;Name=g4829.t1 NODE_4139_length_2133_cov_30.6064 . exon 393 1109 . + . ID=g4829.t1.exon1;Parent=g4829.t1 NODE_4139_length_2133_cov_30.6064 . CDS 393 1109 . + 0 ID=cds.g4829.t1;Parent=g4829.t1 NODE_4139_length_2133_cov_30.6064 . exon 1741 1902 . + . ID=g4829.t1.exon2;Parent=g4829.t1 NODE_4139_length_2133_cov_30.6064 . CDS 1741 1902 . + 0 ID=cds.g4829.t1;Parent=g4829.t1 #PROT g4829.t1 g4829 MPIEYISRLVFDRKHRLLALIKSTRVIGCICYRPFLSQGFAEVVFCAIVSEEQVKGYGTHLMNRLKSELLATGIRHVLTFADNLAIGYFRKQGFVKEVSLDPEIYRGYIKEYEGANLMQCPLDPRFPYADLIGTVRKQRQTLLSAIDARKTRLRARRKGLAQLARGARSIPIADIPGVVDAGFRPAAHGGGGSGGGAGEATGGNLQAALRGCVRDLKEHASAWPFREPVRPEEAPDYHKVIKQPMDLRTLEAKVNQKAYKTVDAFASDVRLIFENCRRYNDPETTYFKVRAA* # ORIGINAL: g3089.t1 original gene structure, not modified by PASA NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS gene 261 1549 . - . ID=g3089;Name=g3089.t1 NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS mRNA 261 1549 . - . ID=g3089.t1;Parent=g3089;Name=g3089.t1 NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS exon 707 1549 . - . ID=g3089.t1.exon1;Parent=g3089.t1 NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS CDS 707 1549 . - 0 ID=cds.g3089.t1;Parent=g3089.t1 NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS exon 261 548 . - . ID=g3089.t1.exon2;Parent=g3089.t1 NODE_4467_length_1579_cov_38.8517_potentialcontaminant AUGUSTUS CDS 261 548 . - 0 ID=cds.g3089.t1;Parent=g3089.t1 #PROT g3089.t1 g3089 MNDVDGAGKDFLRRIKSIEGSINILKGALESNRISGERKEAVRVPLDSVFQTLEDFQRLVKRYENRGGFSKFYHAQGSQKKIEDITDQLNDDIRDLQLALGIIANVGNDTQGDPTDVWANLDKLDEMDFDEAKLAIFTKQMDHTHEIKTKGMGYSHEITTKGMDQAHSLKKKDYEMTKLQKDIEIEGKRVELERKRREDEINAESLRVDADMKRIKAEAKRIELEAKQNKNNIEMQQKMMKLKQQEADLEAKREKGRLELAKMADEREAARFSQVSYIAPQAGTSQVVLLQAAPKQRMMRPQAGTWQTNFCGCFSDIGTCCLSCFCPAISYGRNKSLLEGSGCCLSCFGYCILSICGLHCCLAGGARTSMRNTFSIT # PASA_UPDATE: g6316.t1, single gene model update, valid-1, status:[pasa:asmbl_6397,status:12],[pasa:asmbl_6398,status:12], valid-1 NODE_3675_length_2977_cov_37.6096 . gene 188 2784 . + . ID=g6316;Name=g6316.t1 NODE_3675_length_2977_cov_37.6096 . mRNA 188 2784 . + . ID=g6316.t1;Parent=g6316;Name=g6316.t1 NODE_3675_length_2977_cov_37.6096 . five_prime_UTR 188 189 . + . ID=g6316.t1.utr5p1;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . exon 188 694 . + . ID=g6316.t1.exon1;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . CDS 190 694 . + 0 ID=cds.g6316.t1;Parent=g6316.t1;5_prime_partial=true NODE_3675_length_2977_cov_37.6096 . exon 1016 1504 . + . ID=g6316.t1.exon2;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . CDS 1016 1504 . + 2 ID=cds.g6316.t1;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . exon 1792 2784 . + . ID=g6316.t1.exon3;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . CDS 1792 2291 . + 2 ID=cds.g6316.t1;Parent=g6316.t1 NODE_3675_length_2977_cov_37.6096 . three_prime_UTR 2292 2784 . + . ID=g6316.t1.utr3p1;Parent=g6316.t1 #PROT g6316.t1 g6316 PTAQGISVELWVLFSMVNGESGTLWALADSNGAFNMSLTYETNSVLTIAGSFIVADAQGNALTATFTFTDPRIYSLESNVAYHTVFTYSYLTHTARLYIDSQLIGYVVSNGSKSQLVAMRPMSPPSTISFGDTTYAALFDEVAVYSYEMASSHVRAHAECGSGLRCATELPPCALMINNNCTENDWKALNGTWVGLPTVDSINPSSANVENFSYIRIAEAASPSSFPFLFMYNPSHTALDSGPVLCRREQSSQYRVRDLNAIADDYYYTLEAVLSKTNQVVKFSVIIELGSDGVSTGIWGQSADGCTPQLPGGPVQGSKTSQAKTYVTVKRSNDCVSKCSDPSSIKQCVVSAGTPGQTCPSMNFQIPIAWKMPNGMPAFAFGSGMNISVEYVSGMDTGVMMPFGGNAVFKCPLGSTSVVEVHLLTWPSVFSPVYLTLSDTDGITKAEISMTCRSPNPSVDTLFQGYAWAGGTTCRSHGARGGPCMTPAVITDALSLK* # ORIGINAL: g11986.t1 original gene structure, not modified by PASA NODE_3708_length_2911_cov_44.2204 AUGUSTUS gene 372 1946 . + . ID=g11986;Name=g11986.t1 NODE_3708_length_2911_cov_44.2204 AUGUSTUS mRNA 372 1946 . + . ID=g11986.t1;Parent=g11986;Name=g11986.t1 NODE_3708_length_2911_cov_44.2204 AUGUSTUS exon 372 1946 . + . ID=g11986.t1.exon1;Parent=g11986.t1 NODE_3708_length_2911_cov_44.2204 AUGUSTUS CDS 372 1946 . + 0 ID=cds.g11986.t1;Parent=g11986.t1 #PROT g11986.t1 g11986 MDLVHRRIKVTDMVARRLADMANDSKLIKDVQSHIDDANRCLSSGELDIAHSYLWEALNVVAPFCRGLRDELEAHRKLAEIEWDECLRHLREGVDRLPMNCAATAVFEKLLLELQHDYNAREFEAGASNFARITLPSLTDAIVTQAHDAFRAAEANAATVKELKDKLAHIADKLNAVRDVRFMSAPGVTTLADRPELFVTRLKEHHRHVIEFAKGATNDLWKSSKAGTDVAHVRRPFFKLCQAVLCKTFFRVLYRDVKRGHQQMTERVSLVLADSVFSVESLSDFFREGTRQSQVELTPPRAARPAGISRRSSTPHNTLSVTQDGQSRASLAVPSETSAIFRIMPLRPNSASSTETGHRSPSGVPKPSRHALSKTQCAAVAEIVREQLTNPTGRDMLVRIITARAESLLLQAVEKLRISPPFAHYSRNHAVLSSRTKELAASIARSGASVLVELCGVQSAFAPVFPTGPHLSNVDFRCFYFEGEMEALPQHTPIIVCQPAIVGVTGTLVLTEGLVEANPLDAVP* # ORIGINAL: g12136.t1 original gene structure, not modified by PASA NODE_1584_length_10358_cov_41.5263 AUGUSTUS gene 7533 10322 . + . ID=g12136;Name=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS mRNA 7533 10322 . + . ID=g12136.t1;Parent=g12136;Name=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 7533 7583 . + . ID=g12136.t1.exon1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 7533 7583 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 7754 7861 . + . ID=g12136.t1.exon2;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 7754 7861 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 7977 8183 . + . ID=g12136.t1.exon3;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 7977 8183 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 8453 8617 . + . ID=g12136.t1.exon4;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 8453 8617 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 8716 9022 . + . ID=g12136.t1.exon5;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 8716 9022 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 9167 9273 . + . ID=g12136.t1.exon6;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 9167 9273 . + 2 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 9645 9983 . + . ID=g12136.t1.exon7;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 9645 9983 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 10176 10322 . + . ID=g12136.t1.exon8;Parent=g12136.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 10176 10322 . + 0 ID=cds.g12136.t1;Parent=g12136.t1 #PROT g12136.t1 g12136 MKIDRRQNFPRRSSRPKEPDVDPQIKIALSWPEESLGDKLKSLDLRAGIFNDKQQDLIVFADLLDRFDGILERLLGPADPADGVLKPKITNDADVHLVCQILRVSARILNVTINKQAYSSFDLLAAATVPPRLSNVRGVRLDKVPGLLERVSLLARGRNPGETGYSLHALASSETKEFPIEATTLDFDYCVDDPPAGDAVAAAVEAARARPKHGTIHIEHMDRFSEDAYDILGQLVDKYGVTRKQQFALLCRIRLAMSFADVEKRRSLALTKLHAVAILVHIDAPFEFVEPVFFDDVEIVEEIVAVIEGAEEVTSDLRDAAMSALLAFAQDRGRMSSCLSAIDPSAHHLFTPTLLRKCVAAITATDGEGTEAAAEGAAGGVKLSETFIKSAMAFFGLLATTSFGATSLVATGVIPTLLPLLRHKTADHYVAIAVQVLQSLFRRSDASAEATFAEFGGFDLFVGRLSVSISLCRRLQ* # ORIGINAL: g12135.t1 original gene structure, not modified by PASA NODE_1584_length_10358_cov_41.5263 AUGUSTUS gene 2093 6539 . - . ID=g12135;Name=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS mRNA 2093 6539 . - . ID=g12135.t1;Parent=g12135;Name=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 6473 6539 . - . ID=g12135.t1.exon1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 6473 6539 . - 0 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 6125 6350 . - . ID=g12135.t1.exon2;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 6125 6350 . - 2 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 3769 5938 . - . ID=g12135.t1.exon3;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 3769 5938 . - 1 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 3519 3653 . - . ID=g12135.t1.exon4;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 3519 3653 . - 0 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 3215 3381 . - . ID=g12135.t1.exon5;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 3215 3381 . - 0 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 2953 3069 . - . ID=g12135.t1.exon6;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 2953 3069 . - 1 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 2635 2737 . - . ID=g12135.t1.exon7;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 2635 2737 . - 1 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 2395 2496 . - . ID=g12135.t1.exon8;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 2395 2496 . - 0 ID=cds.g12135.t1;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 2093 2284 . - . ID=g12135.t1.exon9;Parent=g12135.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 2093 2284 . - 0 ID=cds.g12135.t1;Parent=g12135.t1 #PROT g12135.t1 g12135 MASDDTAHDVLFSIRIESIVQKPDCMDLDSEKLKLLSRRQREKRYRDSARMAKTFYYAFSLTKGEQPVKTDAFTFENPLWMHQQRLRVTTELLMQFYKKPLKFKVLERILTQSVRETKDTASVAPTKEKKDSPKKGKGDSKEKDTIGMPPRAPSRPGSVLEPESKLMTKLRAGSTANLRHGEPSVMHLNRPETPGSESNNGDDKQRDAMAFRDATRRRKQSISIELQHVGELLIDVHPLLMGELTTSAQLIGCIPGLEEAKVTVTVDEPLMSYWQAQQLNPLTVTVIRARNLPDNPGGYGDLDRRCLPVSYRYKLLGFAESKSSRGLAHAREVEWNERQLFLAGTFDQDEFREKLTSATFVVEIRDRDRRPPDAGIRPCIYGDGDAKAEEELAGGIARHTRQRIERDPFLGPAPPWDPHGVASFTLQNLLHGKDVLQMTSNILPCRAPPKRGHADPAQLPAGLYIEFGAELEIRVQLMYPFVEAYRPQKAFSRAVYMFNRGEDDLAARLEQLIVAINTSALHLDSLPTTVISAALSSYKLSREQKMSRTLNLVTGFQCVDTDGRIFVIEGLAAIAMERIWNAMLRAAEGRDKTREGSTSPVAGRSGSAGEQRMRQLVQIASRRFRVLYNPELTFGDRLYAAFDACIKTFRLSEPLDTLLTYPLLYVRGTVPHDCMAGLTKLHGMRQMHRLRDVVRLDLLPTAAMIVSVAKTVGMVVPDDEDAAFRAAMVLAERPKSETPFDAGRESSMRSSSASPSGRRKSSLFVSTLQDPVLNMNTDANRAVSMASRTGVTSVIDARNTEFEESIRQRGRLTADFVKENIARFPYCAPTPREIQGPNDEPVYIYSSQKYNTAEEQKKEIRQRIASDKKHIYTYSADFHSLSFVPVDIEEEKKQKEAQTKALWLTDDGFTSTLQRTTEELYRHPQRPDDARIDALREPWDESALHGQLTGHDRKPYTWEKRHEDFDAVGKRIVRLGEPQKSSVHLPGDLRRQEYKEYKTKEKADWESKVVVDDIDFKTLIVGSSEEAHKVAQIDKMKGLLKDPPMKLTLRGRFQAADPPPLALTTGGHTDNMRGPVHIAKDREPLDLTRHIS* # ORIGINAL: g12134.t1 original gene structure, not modified by PASA NODE_1584_length_10358_cov_41.5263 AUGUSTUS gene 721 1311 . - . ID=g12134;Name=g12134.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS mRNA 721 1311 . - . ID=g12134.t1;Parent=g12134;Name=g12134.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS exon 721 1311 . - . ID=g12134.t1.exon1;Parent=g12134.t1 NODE_1584_length_10358_cov_41.5263 AUGUSTUS CDS 721 1311 . - 0 ID=cds.g12134.t1;Parent=g12134.t1 #PROT g12134.t1 g12134 MHSRHLLRIPSFDASVQAARGLKRWGAMVDLTNIEAPHMVDGGASTSGSDSGRSTPLSIHAAAAAAPHVRTGSLSSSSSVSSVSSASLITSKQPYSHSRVAVSLSPVDDPGRPVPQTRVCLLRHSSDVGLGIALPFPQGDVLKSRSLVVARASLRTPHQRQRRASADVADCLGDVGSPLHILLAHVKRKSESDILV* # ORIGINAL: g2561.t1 original gene structure, not modified by PASA NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS gene 4033 11906 . - . ID=g2561;Name=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS mRNA 4033 11906 . - . ID=g2561.t1;Parent=g2561;Name=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 11710 11906 . - . ID=g2561.t1.exon1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 11710 11906 . - 0 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 11416 11576 . - . ID=g2561.t1.exon2;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 11416 11576 . - 1 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 10872 11243 . - . ID=g2561.t1.exon3;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 10872 11243 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 10024 10154 . - . ID=g2561.t1.exon4;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 10024 10154 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 9602 9749 . - . ID=g2561.t1.exon5;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 9602 9749 . - 0 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 8848 9198 . - . ID=g2561.t1.exon6;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 8848 9198 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 8275 8525 . - . ID=g2561.t1.exon7;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 8275 8525 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 7914 8163 . - . ID=g2561.t1.exon8;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 7914 8163 . - 0 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 6463 7707 . - . ID=g2561.t1.exon9;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 6463 7707 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 5967 6168 . - . ID=g2561.t1.exon10;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 5967 6168 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 5551 5761 . - . ID=g2561.t1.exon11;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 5551 5761 . - 1 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 5140 5240 . - . ID=g2561.t1.exon12;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 5140 5240 . - 0 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 4737 4864 . - . ID=g2561.t1.exon13;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 4737 4864 . - 1 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 4558 4625 . - . ID=g2561.t1.exon14;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 4558 4625 . - 2 ID=cds.g2561.t1;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 4033 4251 . - . ID=g2561.t1.exon15;Parent=g2561.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 4033 4251 . - 0 ID=cds.g2561.t1;Parent=g2561.t1 #PROT g2561.t1 g2561 MSWPRRCDFLCAVCNSFDAATIDIKFRDLKGGFASALGGNTRRHPDIEMPWDTTDNQGKIVNIGGWAYSGPNYEKCWGDKPRGCVNCDYLELACSYMNNDGAIQGMVEKTLGKDLKPVYRNNVAAGDMPGKKSIKSNESFWVWYHETAGSNNLATLTTDAFGNYVVFASLTLERVKFSSAFRFSSNKFFPLNGLGFQEKAGNDNNFGFTTEIHVPFIYNPENSVFQFSGDDDFWLFLGDQLVIDLGGLHMPTCRRIDLRNSVVTPTGGLMLANGSCPYTPIPSETFTHTLVYGEEKTMHIFHAERHQDSSNFMIETTIQRFGKSKSSVAGSSNTMSDMQLAVSGDPTIYPGLPFSASVVLNFPPSQAGNITCYLSDDLNANATVIAKAANFIRCPAESNLTRTLSLDLASAVKEGRSYTMGGASFGNGTLTCNVDTVWYSNFYGVSTTLDINIDVGILYEGRQVWKPSASFAGIAMAFEAGTAFSVGVCKKMLDTLDIFSIRQVCTNGNLVNNGVGQRITIALFEPIGSVSWAFDANVDCGWGGYVIVDGNTGSPTKVDTSDVMMGSGKLNVTVTLMRGWHVVELLCLEDQLGPMGQSIFFQRGTDPKVVVSQANLRNAAKSAFRVASTSANAFIRAASASSVAYATSLAVVGSIEAIRSANAVASANAYQSAISIASVVVEASRASASLVAASASLESARVGMASLASQASSASANAVASANAFQSANSIASAASAESAVVEASRASASLVAASASLEGVRIGMASLASQASSASANAVASTNAFQSANSIASAASAVVEASRVSASLVAASASLESARVGMASLASQASSASDDAVRASAASPASKASIASQSTVSMATPDPTTSRGIASPTRTDTSTSTDVGDKSPTIVPGVGTAGSSSGGSNSAVIAGAVIGVVILAAFVATIAFFITRRRTSTNRFGFVQRNWSKGKESSGDDHALNYVPVVRPEENEHLRVNPRAGSHLNAASYDGANSLRNVGGVALTRPQAAAQWTDSDQRRVVYEAIDDADVADVLGVQVIERRFLVVGDMLGSGNFAEVRVGSLLPTVRGAAAAVPVAIKALKTDSTDAHKSLLLEEASLMNRMRHPNVVGVVGIIVDSLGPVIVIMDLMEEGSLVDYLTKGRDLLKRTTLAALCRDVAAGMTLLEQNGMVHRDLAARNVLVSRDGRAKIADFGLARQMEHDYYITRGGAIPVKWTAIEACMFKRYSTASDVWSFGVLCWEVFSLGCKPYENMTNREVLDFIDQGGRLEQPEMANDRIFAVMQQCWLVAPKHRPTFIALFAKMQAEATISARHSRPGSEGGVDAGYAELEPENAYKTYLQMPDP* # ORIGINAL: g2562.t1 original gene structure, not modified by PASA NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS gene 14100 15644 . + . ID=g2562;Name=g2562.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS mRNA 14100 15644 . + . ID=g2562.t1;Parent=g2562;Name=g2562.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 14100 14199 . + . ID=g2562.t1.exon1;Parent=g2562.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 14100 14199 . + 0 ID=cds.g2562.t1;Parent=g2562.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 15199 15644 . + . ID=g2562.t1.exon2;Parent=g2562.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 15199 15644 . + 2 ID=cds.g2562.t1;Parent=g2562.t1 #PROT g2562.t1 g2562 MVRGSYCSYAKTKATGSADHAANANKQFESDSLVGITLGIEKPTGPSVVVTEDERKYYEALLAEASAAKTGYINHQLLLQSLAYSDGQVLDRDPSQLFQAGIHHPACFVHPLIAFLFVPKVDALDERVLLSDFARMVSGVPPPRDGGAGVGGGVGGGVGGGVGGGVRQALFLEATFNSITI* # ORIGINAL: g2560.t1 original gene structure, not modified by PASA NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS gene 50 1840 . + . ID=g2560;Name=g2560.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS mRNA 50 1840 . + . ID=g2560.t1;Parent=g2560;Name=g2560.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS exon 50 1840 . + . ID=g2560.t1.exon1;Parent=g2560.t1 NODE_921_length_15858_cov_22.6693_potentialcontaminant AUGUSTUS CDS 50 1840 . + 0 ID=cds.g2560.t1;Parent=g2560.t1 #PROT g2560.t1 g2560 MWTVVHGSGRSYLNKGKKRLTVDNLSCSLHKTVIFENVFLTADSGELVFIMGPSGCGKTTLLDTLCSRRQPGQQLGTVSVTNLDIGCEIPVCNSVYVQQDDVFFPNLTPFEHLMFNYLERGGGKNPTKTVNNCLQLVNLADVAHQPIGGVLPGGIAVKGLSGGQRRRLSVAAALLVEPDIILLDEPTSGLDSHNAEVIISVCKNIAKTNCIVFCVIHQPSTAVYKSADRVILLGKDITGVGRVIENLRLTDLPEDHPMQNPTLALHNAIEFENQPIVKCMETPRISRALTTRPTIKQEGPAEQTDWKKPELPRRRSSFYVRLRRPAAKMFQTCVRTLSLQTNTFMSTYLLFRRSLTVAIRSPVNFLARFGSMCVFGLLLGTLFANADMKNKATISSLIFPTLISLQCLPFGSIATFQDMRIYYVRERNNKLYRQIAFAAAMIALEILIACVCGVTMVSIIYGIAARSLPALAFIGIGTIFHVVSNLFILAVSVWTENATVGFSIAAAATSIMQLYAGFFIPIRSVPVWLRWLSRISFTRYAMDAFVAGCTGDGELAKALGLSGDLKEAIVCLCVFIVGFSVVCYHGLDRHRRGRAS* # PASA_UPDATE: g13714.t1, single gene model update, valid-1, status:[pasa:asmbl_5470,status:12],[pasa:asmbl_5472,status:12], valid-1 NODE_3045_length_4459_cov_41.3262 . gene 1322 4272 . - . ID=g13714;Name=g13714.t1 NODE_3045_length_4459_cov_41.3262 . mRNA 1322 4272 . - . ID=g13714.t1;Parent=g13714;Name=g13714.t1 NODE_3045_length_4459_cov_41.3262 . five_prime_UTR 4234 4272 . - . ID=g13714.t1.utr5p1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . exon 4188 4272 . - . ID=g13714.t1.exon1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . CDS 4188 4233 . - 0 ID=cds.g13714.t1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . exon 3518 4014 . - . ID=g13714.t1.exon2;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . CDS 3518 4014 . - 2 ID=cds.g13714.t1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . exon 3167 3344 . - . ID=g13714.t1.exon3;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . CDS 3167 3344 . - 0 ID=cds.g13714.t1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . exon 2736 2893 . - . ID=g13714.t1.exon4;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . CDS 2736 2893 . - 2 ID=cds.g13714.t1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . exon 1322 2544 . - . ID=g13714.t1.exon5;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . CDS 1636 2544 . - 0 ID=cds.g13714.t1;Parent=g13714.t1 NODE_3045_length_4459_cov_41.3262 . three_prime_UTR 1322 1635 . - . ID=g13714.t1.utr3p1;Parent=g13714.t1 #PROT g13714.t1 g13714 MISPTAGLEPSAPSQAGDKEKKVNVQQSLNAEDEQHPAVNGVLAIYVKECRRLHDPHFKGSSFSCYVKLTVRTYVKRTKVVKQDPSNPRWSQIKHFPVSLLRNPKHPFNLVKLEVYGFDDNEADQSRHHYIGGIAFHLHDVVRATPVMGTFDVSNKNQVVGVLSLELSFTYGAFGYGYSTQLKDDVRPPEELLANSLFPRFVPPEDRKEPYREVLMPHAVAHPSYIPFDSEVTLSYAKGFERIMADIPDNAFKPRNLSVAMTRLQGLKDEHKGISGRAERLAFLRNTILASSSGQEMVQEGINIAQSKRVTKAYLRFVKPLSAFDEEKRLPVEGAPPEIALVPHRLSKLFVSLRQTPTKPQEVEEPASATTDPNVRPLSVLREMPSLTSLEINEMMEEEEEEGRHVNAASTSATIMHNNPTKAFGGMGSSDLADSASIGWHSDVGDRTAGGSASSLELLGRKHSGAIGSHQSKGAGPSNNSAATSGVGGVTPGGDRASIGSARSDAILDDGAGFEDESKVADAAAEAYGMSPGGQFHFGEPDDERLLRPAGSQASVQSDVGPIWPSSKPSAEAQLVKSLEKDLDNDEDDGAGFKM* # PASA_UPDATE: g13713.t1, single gene model update, valid-1, status:[pasa:asmbl_5471,status:12], valid-1 NODE_3045_length_4459_cov_41.3262 . gene 46 1152 . + . ID=g13713;Name=g13713.t1 NODE_3045_length_4459_cov_41.3262 . mRNA 46 1152 . + . ID=g13713.t1;Parent=g13713;Name=g13713.t1 NODE_3045_length_4459_cov_41.3262 . exon 46 183 . + . ID=g13713.t1.exon1;Parent=g13713.t1 NODE_3045_length_4459_cov_41.3262 . CDS 46 183 . + 0 ID=cds.g13713.t1;Parent=g13713.t1;5_prime_partial=true NODE_3045_length_4459_cov_41.3262 . exon 446 1152 . + . ID=g13713.t1.exon2;Parent=g13713.t1 NODE_3045_length_4459_cov_41.3262 . CDS 446 901 . + 0 ID=cds.g13713.t1;Parent=g13713.t1 NODE_3045_length_4459_cov_41.3262 . three_prime_UTR 902 1152 . + . ID=g13713.t1.utr3p1;Parent=g13713.t1 #PROT g13713.t1 g13713 VPITEKLNKLQRQLDEEKERYARLQVVLEASGGDGLASLLEHERAKRENLEGLLEHLREQLTRASALPPMAQRNSVASMSVPPMQQSGSSFSVGRMLSRPQSARTQSISVAARSPRGSTVMTTPLKWSIAQPDGILSASAASTPRKASVVETSAPGSSSPGKKRKSKKKHNTPGAIFTKEPRRPSEVLASPPSRYSR* # ORIGINAL: g12834.t1 original gene structure, not modified by PASA NODE_11589_length_284_cov_523.67 AUGUSTUS gene 1 284 . - . ID=g12834;Name=g12834.t1 NODE_11589_length_284_cov_523.67 AUGUSTUS mRNA 1 284 . - . ID=g12834.t1;Parent=g12834;Name=g12834.t1 NODE_11589_length_284_cov_523.67 AUGUSTUS exon 1 284 . - . ID=g12834.t1.exon1;Parent=g12834.t1 NODE_11589_length_284_cov_523.67 AUGUSTUS CDS 1 284 . - 0 ID=cds.g12834.t1;Parent=g12834.t1 #PROT g12834.t1 g12834 TPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSVSQRVSEEDVDGKGSVVALL # ORIGINAL: g11376.t1 original gene structure, not modified by PASA NODE_504_length_22214_cov_41.7749 AUGUSTUS gene 17735 21826 . - . ID=g11376;Name=g11376.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS mRNA 17735 21826 . - . ID=g11376.t1;Parent=g11376;Name=g11376.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 17735 21826 . - . ID=g11376.t1.exon1;Parent=g11376.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 17735 21826 . - 0 ID=cds.g11376.t1;Parent=g11376.t1 #PROT g11376.t1 g11376 MGEKAPPVGDVRELIDACRAALGNNALSADARSPLLLADKHIAMLADYAHCLMGAIHGKADLDRYGTAFELLATLMPVHPGNESAWYPTRVHGSVRSPIIPSQANPFHVLLEGQLAGTHQAVVRVASMGDADDSLRRARAAFSALAVFDNMATDSVSIDFTYAPPTPFLAGVGPSYYARARFDLDYGIVHLNPVQDGNAAESEPMAPPVIEMELLDTDDMLPVTMRKSIRSDDKKRMWLNYRARIKLFSTGKLSVVLRARQVPANESELSSPLMETHQQKRRRVEQSDEQSNNIPSVPVGRAPQTPVPGATYVVLSSRRPNSAMEICVEYRPSCIRTSFADFVMMGVGSLVRTWRAAAAGSPGAQPALPAIDQDVLAAVVEMLVRLHENDLPGMRCARWQLVGLFAGAADILDGCAAAVAMLLDVVPPHMSDKQDCARLIIMGSYGLAAIARRRLAARTNASGSIPDVEAAASLRHAEEVRHIWDIVLSHIHEIDAVLWHPITECFEERPEKTEPTLIHLLASDAASDPRIGRMLQRLPVSSPIWGMRDSAGNGLASFALSNEVVVRHVLAQGGISVFCAANPSGLSQLSTAIRNCAPTSLDSRSVMDIAKSFASAGAAAEFRRQIYAAFASPFEEAHCESGDGAALVRSREPAHFLRLRDGEVNADHYVDRLVSCLDGPSVSDLAKHFIETALNECALPIPGATAAWFRARSLCLTVAGSLLRMARLRASRSPVLGALLAPIFNLFGPLWTATSVQFPCASFRKALAGIVGACRGFPSTMAEPDSTLRKAALGVLATMIVLVMAQCRRRCCSLPAIVGSACCFGEFQVGPEATSNDARTSSKYSSLHKRIDVSVSAWMLIDGNSPSGDTPDRDEAPRSVTLMLRRNAEVRDLLTTVALGTPCRVYSNRLEIGFVGENGKGPGVALAGIGLLCGVFLKRAAGLFVSRDEGRTLYIDEASPILSDESTAKRTFLAFGKVLALAISLAVPATGHFVLSPALWSVLLHHERRILFDDGHLQALDPELYRNLCSSVRDVQLDADYLVSIGEPRFVRVNGRRQELAIVPGGDTLLLTEGNKDAYLNAMADSIVRSKEVMACVASMRAGFDAVLPGFLETMTGIDENNSGSSPLGGAGSCYLSTRLCGVDNVDAGYIARKTLCRCIPAEGHSVDLRSYLSAETSGDVGSRPVPPWNIGGASLAVPLDGNSRGNASASDPMEVDESRQTAGVAENLDLHLHGVPATTPATTPTVVDTAQRVVDDFWTYTRALNHDGLGALLEFWTGSRRVPSAGYVDLRRPRTLPGGVHVDDDTGDLQFELAVNMAKDARSLPIVSTCARMLVIPPYESYEALAKKMETAIGLCNEFELN* # ORIGINAL: g11372.t1 original gene structure, not modified by PASA NODE_504_length_22214_cov_41.7749 AUGUSTUS gene 4865 7517 . + . ID=g11372;Name=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS mRNA 4865 7517 . + . ID=g11372.t1;Parent=g11372;Name=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 4865 4993 . + . ID=g11372.t1.exon1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 4865 4993 . + 0 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 5169 5261 . + . ID=g11372.t1.exon2;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 5169 5261 . + 0 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 5429 5548 . + . ID=g11372.t1.exon3;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 5429 5548 . + 0 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 5710 5849 . + . ID=g11372.t1.exon4;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 5710 5849 . + 0 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 6059 6703 . + . ID=g11372.t1.exon5;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 6059 6703 . + 1 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 6932 7031 . + . ID=g11372.t1.exon6;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 6932 7031 . + 1 ID=cds.g11372.t1;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 7284 7517 . + . ID=g11372.t1.exon7;Parent=g11372.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 7284 7517 . + 0 ID=cds.g11372.t1;Parent=g11372.t1 #PROT g11372.t1 g11372 MIIVDYKWSLRGLEQKTDAYNDARSAAHQRSAQRLLRLCQWNKGIYTKAGQHVASLNYAAPPEYTRTLSVLQDKAPSHPFESIRAVIERELGGRPEDVFAAISESAIAAASLAQVHEAITHDGERIALKIQYPSLREDFDSDLWTMRLLADAVAWWFPDVHLHWIVEEFRKNLVQELDFVNEAKNAEKIAACFADRRDVKVPSIRWDLTTSRVLAMEFVDGVKINDAEGLRNAGFDAGAVAQTLSEIFGDMIFVHGFVHCDPHPGNLFVRWSDSGAEGAGARGARGHVRRTMQVVLLDHGLYRELTEDFRINYCGLWKSLVTMDEGLLKRSSVALGAGQYYDLFPLIFTFRVWNGSSKLGEAMSKEDRNRIRAQFSQTTMSDVLDFLEGLPRDMLLVMRTNNLVRSICKDLGGRSLYRFEILAKSAVAGLHVRDRIAGRPTSVGAWLAYSWDIIRLNIFIAVSRVLMWGALWWNGLGDAQDADNFR* # PASA_UPDATE: g11371.t1, single gene model update, valid-1, status:[pasa:asmbl_7826,status:3], valid-1 NODE_504_length_22214_cov_41.7749 . gene 2981 4116 . - . ID=g11371;Name=g11371.t1 NODE_504_length_22214_cov_41.7749 . mRNA 2981 4116 . - . ID=g11371.t1;Parent=g11371;Name=g11371.t1 NODE_504_length_22214_cov_41.7749 . five_prime_UTR 4070 4116 . - . ID=g11371.t1.utr5p1;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . exon 3985 4116 . - . ID=g11371.t1.exon1;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . CDS 3985 4069 . - 0 ID=cds.g11371.t1;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . exon 3661 3815 . - . ID=g11371.t1.exon2;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . CDS 3661 3815 . - 2 ID=cds.g11371.t1;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . exon 2981 3377 . - . ID=g11371.t1.exon3;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . CDS 3291 3377 . - 0 ID=cds.g11371.t1;Parent=g11371.t1 NODE_504_length_22214_cov_41.7749 . three_prime_UTR 2981 3290 . - . ID=g11371.t1.utr3p1;Parent=g11371.t1 #PROT g11371.t1 g11371 MFTHAFKTSIRRGFASAAHGQGFEAHAQATATLWKKIFLFVGIPGVGLATFNSVRLHYAHAAHPEHHEFVAYPHMRLRAKPFPWGDGDRSLFYNTHVNLGHKEEEHDH* # ORIGINAL: g11373.t1 original gene structure, not modified by PASA NODE_504_length_22214_cov_41.7749 AUGUSTUS gene 7787 9726 . - . ID=g11373;Name=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS mRNA 7787 9726 . - . ID=g11373.t1;Parent=g11373;Name=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 9460 9726 . - . ID=g11373.t1.exon1;Parent=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 9460 9726 . - 0 ID=cds.g11373.t1;Parent=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 8216 9309 . - . ID=g11373.t1.exon2;Parent=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 8216 9309 . - 0 ID=cds.g11373.t1;Parent=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 7787 8087 . - . ID=g11373.t1.exon3;Parent=g11373.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 7787 8087 . - 1 ID=cds.g11373.t1;Parent=g11373.t1 #PROT g11373.t1 g11373 MSATKSAESAEALAAIEQLLEDLNAVDDNPSVSSHGDDGSSFVDGDDRRASMRRLSEGSLERVASIFARIGNASVKGSIRIHNGTGHGQEDTKVIMIDAETTTSEVVLLVLAKFNDASLRQLNPEDCTLHWVSGGLTDKELTEDEHPLEYRQRLPPDAIVLDRDRYYLRTSVIDLTTGEIPVQFTGRWHTAGLLTIPLTALTFTNQTIAIALQAAAIFNDIGEVALVVLSGKEERVLGMWDQPLLVQKAYDGKAFFRICPKADLATTATPAASLSPVALQPEQDEFRSRSRSVLASGMKSIINETAKDFRRRTASLGEAFSGNIGKKRDSKDGKALSKKATGKSGSETDHLTPLMDIPGSPALERSAKGVVFGAPLDKGVLDSRGVPVLVSACVAVLEEGGHLNEEGIYRVSAAAGRLAELRRLIESNPSNPGSQIVASECPNVITNILKSYLRELPDHILTDPLKPHFAVVASIADDTSRNDAMRKMVLQLPTVNRRLLGALFTHLQRVLQREVENKMPLKNLGIVFCPTLQIPARLFCIMMEGNEALFAEP* # ORIGINAL: g11370.t1 original gene structure, not modified by PASA NODE_504_length_22214_cov_41.7749 AUGUSTUS gene 303 2765 . + . ID=g11370;Name=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS mRNA 303 2765 . + . ID=g11370.t1;Parent=g11370;Name=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 303 402 . + . ID=g11370.t1.exon1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 303 402 . + 0 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 747 999 . + . ID=g11370.t1.exon2;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 747 999 . + 2 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 1141 1238 . + . ID=g11370.t1.exon3;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 1141 1238 . + 1 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 1451 1642 . + . ID=g11370.t1.exon4;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 1451 1642 . + 2 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 1788 1997 . + . ID=g11370.t1.exon5;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 1788 1997 . + 2 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 2137 2215 . + . ID=g11370.t1.exon6;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 2137 2215 . + 2 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 2427 2496 . + . ID=g11370.t1.exon7;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 2427 2496 . + 1 ID=cds.g11370.t1;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 2709 2765 . + . ID=g11370.t1.exon8;Parent=g11370.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 2709 2765 . + 0 ID=cds.g11370.t1;Parent=g11370.t1 #PROT g11370.t1 g11370 MEDIVTIADVVKNQQACERALNRIISKGCSYDEGYVRQDLFYCADCSRGHEDEPVGFCKACSLACHAAHDVKELYAKRAFRCDCGNARAGNNGAKCTQKPDKDPVNEGNKYVLLMCCQYNHNFRGLYCSCDRPYDEDAEQETMLQCYICEDWFHESCLRADGSGPIDADAAQAPTVVCKKCAPSSSILRAYAISNDGSNAALSETETPKKCPLEGGAIAAPEKSTPFVLSDGWRDRLCDCDGCRKVAHDANLGFVFDAAADVEEGEDEDEDEDDGADDDAKAPEAALDAQLAAALHDMPPEMQVELAAGYRDMAEAFKAKFEKISREGGVVVDKDIEDVIQNLREIKRRRLD* # PASA_UPDATE: g11375.t1, single gene model update, valid-1, status:[pasa:asmbl_7827,status:3], valid-1 # PASA_UPDATE: g11375.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7828,status:3], valid-1 NODE_504_length_22214_cov_41.7749 . gene 13651 17629 . + . ID=g11375;Name=g11375.t1 NODE_504_length_22214_cov_41.7749 . mRNA 13651 17629 . + . ID=g11375.t1;Parent=g11375;Name=g11375.t1 NODE_504_length_22214_cov_41.7749 . five_prime_UTR 13651 13754 . + . ID=g11375.t1.utr5p1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 13651 13923 . + . ID=g11375.t1.exon1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 13755 13923 . + 0 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 14077 14243 . + . ID=g11375.t1.exon2;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 14077 14243 . + 2 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 14430 14467 . + . ID=g11375.t1.exon3;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 14430 14467 . + 0 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 14609 14726 . + . ID=g11375.t1.exon4;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 14609 14726 . + 1 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 14880 15129 . + . ID=g11375.t1.exon5;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 14880 15129 . + 0 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 15297 15375 . + . ID=g11375.t1.exon6;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 15297 15375 . + 2 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 15653 15841 . + . ID=g11375.t1.exon7;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 15653 15841 . + 1 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 15996 16701 . + . ID=g11375.t1.exon8;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 15996 16701 . + 1 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 16833 16883 . + . ID=g11375.t1.exon9;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 16833 16883 . + 0 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 16997 17051 . + . ID=g11375.t1.exon10;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 16997 17051 . + 0 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 17198 17384 . + . ID=g11375.t1.exon11;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 17198 17384 . + 2 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . exon 17511 17629 . + . ID=g11375.t1.exon12;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . CDS 17511 17565 . + 1 ID=cds.g11375.t1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . three_prime_UTR 17566 17629 . + . ID=g11375.t1.utr3p1;Parent=g11375.t1 NODE_504_length_22214_cov_41.7749 . mRNA 13651 17629 . + . ID=g11375.t1.1.5b6be70c;Parent=g11375;Name=g11375.t1 NODE_504_length_22214_cov_41.7749 . five_prime_UTR 13651 13754 . + . ID=g11375.t1.1.5b6be70c.utr5p1;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 13651 13923 . + . ID=g11375.t1.1.5b6be70c.exon1;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 13755 13923 . + 0 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 14077 14243 . + . ID=g11375.t1.1.5b6be70c.exon2;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 14077 14243 . + 2 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 14430 14467 . + . ID=g11375.t1.1.5b6be70c.exon3;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 14430 14467 . + 0 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 14609 14726 . + . ID=g11375.t1.1.5b6be70c.exon4;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 14609 14726 . + 1 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 14880 15129 . + . ID=g11375.t1.1.5b6be70c.exon5;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 14880 15129 . + 0 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 15297 15375 . + . ID=g11375.t1.1.5b6be70c.exon6;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 15297 15375 . + 2 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 15653 15841 . + . ID=g11375.t1.1.5b6be70c.exon7;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 15653 15841 . + 1 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 15996 16701 . + . ID=g11375.t1.1.5b6be70c.exon8;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 15996 16701 . + 1 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 16833 16883 . + . ID=g11375.t1.1.5b6be70c.exon9;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 16833 16883 . + 0 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 16997 17384 . + . ID=g11375.t1.1.5b6be70c.exon10;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . CDS 16997 17110 . + 0 ID=cds.g11375.t1.1.5b6be70c;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . exon 17511 17629 . + . ID=g11375.t1.1.5b6be70c.exon11;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . three_prime_UTR 17111 17384 . + . ID=g11375.t1.1.5b6be70c.utr3p1;Parent=g11375.t1.1.5b6be70c NODE_504_length_22214_cov_41.7749 . three_prime_UTR 17511 17629 . + . ID=g11375.t1.1.5b6be70c.utr3p2;Parent=g11375.t1.1.5b6be70c #PROT g11375.t1 g11375 MTDGDYSKEDEMDSAQVVVELDEVHAHTTHENVIASGSSSSVETANNAASFNGRPSRLSVFAKSDDRKASNNVPIALTWDHVKYTVVTKKRGKVVNEKVILQDVTGSAKPGEMIAIMGTSGAGKTSFLNVLAGRHVQGVVDGQILLNGEPRSKMFKRQSAYVEQDDLLFPNLTVRETFTYTALLRLPRKLTKEEKVQRAMDVITELGLLSCIDTRIGNEANRGISGGERKRTSIGVELITNPRMLFLDEPTSGLDSFTAFHIMESVRELANAGRAVITTLHQPNRKVFELFDKLLLLTKGRIVFYGPAAKAIDFFAQQGYPCPGLSNAADHFLDVVTVDTRTPELTEETTSRVKFMQDAYSNSEFAQMAMLEVAQRSQSTASQDTEKRKSVKRKSVFGSSSSSYQWNLPWVLEMAVLLSRAIKNFMREKRVTVVALVQSIFMSLLVGGIFFDIGFDQNSIQNRSGALFFILINQSFGSMIAILTLFQSEKAIFMRERSAGTYRVSAYYIAKNLSELPVQIFLPIVFGSIIYWMIGLNTEPGRFFTFLLLLVTTVLAAQSLGQVISAAAPSMQIANAVGPIVMILFLLFGGFYLNSADIWPGFYWIKYISFLNYGYRAIAANEYAGLVFECNTGIARCVRTGDEVLEQLDFADVNKWADFGVLVALVVGYRFLAYLALLYLAKPKSKI* #PROT g11375.t1.1.5b6be70c g11375 MTDGDYSKEDEMDSAQVVVELDEVHAHTTHENVIASGSSSSVETANNAASFNGRPSRLSVFAKSDDRKASNNVPIALTWDHVKYTVVTKKRGKVVNEKVILQDVTGSAKPGEMIAIMGTSGAGKTSFLNVLAGRHVQGVVDGQILLNGEPRSKMFKRQSAYVEQDDLLFPNLTVRETFTYTALLRLPRKLTKEEKVQRAMDVITELGLLSCIDTRIGNEANRGISGGERKRTSIGVELITNPRMLFLDEPTSGLDSFTAFHIMESVRELANAGRAVITTLHQPNRKVFELFDKLLLLTKGRIVFYGPAAKAIDFFAQQGYPCPGLSNAADHFLDVVTVDTRTPELTEETTSRVKFMQDAYSNSEFAQMAMLEVAQRSQSTASQDTEKRKSVKRKSVFGSSSSSYQWNLPWVLEMAVLLSRAIKNFMREKRVTVVALVQSIFMSLLVGGIFFDIGFDQNSIQNRSGALFFILINQSFGSMIAILTLFQSEKAIFMRERSAGTYRVSAYYIAKNLSELPVQIFLPIVFGSIIYWMIGLNTEPGRFFTFLLLLVTTVLAAQSLGQVISAAAPSMQIANAVGPIVMILFLLFGGFYLNSADIWPGFYWIKYSEYKAQRIACVGAVLLVTS* # ORIGINAL: g11374.t1 original gene structure, not modified by PASA NODE_504_length_22214_cov_41.7749 AUGUSTUS gene 10799 12311 . + . ID=g11374;Name=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS mRNA 10799 12311 . + . ID=g11374.t1;Parent=g11374;Name=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 10799 10978 . + . ID=g11374.t1.exon1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 10799 10978 . + 0 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 11070 11132 . + . ID=g11374.t1.exon2;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 11070 11132 . + 0 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 11231 11354 . + . ID=g11374.t1.exon3;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 11231 11354 . + 0 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 11481 11580 . + . ID=g11374.t1.exon4;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 11481 11580 . + 2 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 11682 11870 . + . ID=g11374.t1.exon5;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 11682 11870 . + 1 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 11964 12033 . + . ID=g11374.t1.exon6;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 11964 12033 . + 1 ID=cds.g11374.t1;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS exon 12153 12311 . + . ID=g11374.t1.exon7;Parent=g11374.t1 NODE_504_length_22214_cov_41.7749 AUGUSTUS CDS 12153 12311 . + 0 ID=cds.g11374.t1;Parent=g11374.t1 #PROT g11374.t1 g11374 MSYPIDDLDPMEMVHGGPDDEVRTLFVSGLPLDVKQRELYLLFRGFGGYEGTLLRMTGKQPVAFATFVDRNSAEVAKAALQGIRFDPDLPQSLRLEFAKSNTKTRRHGAAGYRDAPYGAQRGYDSQYYPEHSGIHWQEPQPPLHPAGLHAPSAQAGFPSGYDSYHSQQPFGYGQAPQAHLQAQAPPPAGSQGNAPCSTLFVANIPPQAADQELRDLFVGFGGFRRLRLNAKGSTPVCFVEFQEIHQAVQAMNTLQGFQFSPSDRGGLRIEYARSKMSDHMNPMNPMSNPMNPGY* # PASA_UPDATE: g9851.t1, single gene model update, valid-1, status:[pasa:asmbl_6294,status:12], valid-1 NODE_3604_length_3130_cov_36.454 . gene 139 3071 . + . ID=g9851;Name=g9851.t1 NODE_3604_length_3130_cov_36.454 . mRNA 139 3071 . + . ID=g9851.t1;Parent=g9851;Name=g9851.t1 NODE_3604_length_3130_cov_36.454 . five_prime_UTR 139 139 . + . ID=g9851.t1.utr5p1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . exon 139 276 . + . ID=g9851.t1.exon1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 140 276 . + 0 ID=cds.g9851.t1;Parent=g9851.t1;5_prime_partial=true NODE_3604_length_3130_cov_36.454 . exon 688 799 . + . ID=g9851.t1.exon2;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 688 799 . + 1 ID=cds.g9851.t1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . exon 1042 1143 . + . ID=g9851.t1.exon3;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 1042 1143 . + 0 ID=cds.g9851.t1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . exon 1537 1670 . + . ID=g9851.t1.exon4;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 1537 1670 . + 0 ID=cds.g9851.t1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . exon 2021 2100 . + . ID=g9851.t1.exon5;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 2021 2100 . + 1 ID=cds.g9851.t1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . exon 2446 3071 . + . ID=g9851.t1.exon6;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . CDS 2446 2663 . + 2 ID=cds.g9851.t1;Parent=g9851.t1 NODE_3604_length_3130_cov_36.454 . three_prime_UTR 2664 3071 . + . ID=g9851.t1.utr3p1;Parent=g9851.t1 #PROT g9851.t1 g9851 ATPNREVVIVYGSTEAEPISMVKAVMKKAAEHSNSYGLCVGPPFIPGGVKIIKGSDDDWKQTPIASIELPANQVGEIVVSGWQVNTYEVPASRILKDVHGNEWLRTGDAGYLDKDGLIWLVGRISWRVERDGKTYWSTVVEQTILDAFVDVTFAAYLPHEGKTHLFVETANPGSVDLRRKVQSLVREIGCPVDNLVLTRSIPRDRRHGSKPDPSKMFVKPLVSKESLVRYAPYGILLLFVLLVLFLRSSPSDHTSDAASA* # ORIGINAL: g10686.t1 original gene structure, not modified by PASA NODE_1546_length_10542_cov_41.5843 AUGUSTUS gene 234 742 . + . ID=g10686;Name=g10686.t1 NODE_1546_length_10542_cov_41.5843 AUGUSTUS mRNA 234 742 . + . ID=g10686.t1;Parent=g10686;Name=g10686.t1 NODE_1546_length_10542_cov_41.5843 AUGUSTUS exon 234 446 . + . ID=g10686.t1.exon1;Parent=g10686.t1 NODE_1546_length_10542_cov_41.5843 AUGUSTUS CDS 234 446 . + 0 ID=cds.g10686.t1;Parent=g10686.t1 NODE_1546_length_10542_cov_41.5843 AUGUSTUS exon 614 742 . + . ID=g10686.t1.exon2;Parent=g10686.t1 NODE_1546_length_10542_cov_41.5843 AUGUSTUS CDS 614 742 . + 0 ID=cds.g10686.t1;Parent=g10686.t1 #PROT g10686.t1 g10686 MRYVDPDDERCEASFPRHVTGNIMRANIVVRPSQVIAKIDRPFGVALVENDELAPPSAVTALFEGSTVGHKQIDIVPGYTHMSLMEIGSELLAGFLRTMFAEIHAPVDAPPQR* # PASA_UPDATE: g10688.t1, single gene model update, valid-1, status:[pasa:asmbl_1928,status:12], valid-1 NODE_1546_length_10542_cov_41.5843 . gene 7918 10426 . - . ID=g10688;Name=g10688.t1 NODE_1546_length_10542_cov_41.5843 . mRNA 7918 10426 . - . ID=g10688.t1;Parent=g10688;Name=g10688.t1 NODE_1546_length_10542_cov_41.5843 . exon 10328 10426 . - . ID=g10688.t1.exon1;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . CDS 10328 10426 . - 0 ID=cds.g10688.t1;Parent=g10688.t1;5_prime_partial=true NODE_1546_length_10542_cov_41.5843 . exon 9889 10122 . - . ID=g10688.t1.exon2;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . CDS 9889 10122 . - 0 ID=cds.g10688.t1;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . exon 9242 9566 . - . ID=g10688.t1.exon3;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . CDS 9242 9566 . - 0 ID=cds.g10688.t1;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . exon 9019 9074 . - . ID=g10688.t1.exon4;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . CDS 9019 9074 . - 2 ID=cds.g10688.t1;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . exon 7918 8556 . - . ID=g10688.t1.exon5;Parent=g10688.t1 NODE_1546_length_10542_cov_41.5843 . CDS 7918 8556 . - 0 ID=cds.g10688.t1;Parent=g10688.t1 #PROT g10688.t1 g10688 TAADLPNVYARRKDTAGAAPVRVKGYEAEGPNQQVYIVDARDPDSSSLSVVTLRKQFAEFYDLHMRLIASFPDEAGTRGDKRVLPELPPQRMFVTDEIARSRVRELDTYCIRLLGLPAKISRSDVVVAFFFPGKATAAAATASKSATSASNPATARQSAAPAGDWRTLIAQNRAKGVQPRPDISERPEFTKVELKKTDHGKLIKEGRDPLELSKKSPAPTRVTGAVPQPPAADAEFAQVKLKKTNIGQQLYAAEQRHLASEQKYRKDDVDRTSSLALAYSPAGAPISEAEAAAAVAAAGGMADERRPSDSLKQSDRKGSRVSLSGGANAAASTSSPKTASSPSKKKLSTASLASAGDVVKPRSGSALAISGADVPANVSVSADEAESGNVDGSETPDSVTGGVDGADGAGDGKKKKKDKGKKKKKEKGDKADKGDKGDKGDKGKDECLVM* # PASA_UPDATE: g10687.t1, single gene model update, valid-1, status:[pasa:asmbl_1927,status:12], valid-1 NODE_1546_length_10542_cov_41.5843 . gene 2648 7531 . + . ID=g10687;Name=g10687.t1 NODE_1546_length_10542_cov_41.5843 . mRNA 2648 7531 . + . ID=g10687.t1;Parent=g10687;Name=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 2648 3007 . + . ID=g10687.t1.exon1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 2648 3007 . + 0 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 3299 3411 . + . ID=g10687.t1.exon2;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 3299 3411 . + 0 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 3720 3864 . + . ID=g10687.t1.exon3;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 3720 3864 . + 1 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 4099 4350 . + . ID=g10687.t1.exon4;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 4099 4350 . + 0 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 4507 4593 . + . ID=g10687.t1.exon5;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 4507 4593 . + 0 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 4756 4859 . + . ID=g10687.t1.exon6;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 4756 4859 . + 0 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 5167 5925 . + . ID=g10687.t1.exon7;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 5167 5925 . + 1 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . exon 6203 7531 . + . ID=g10687.t1.exon8;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . CDS 6203 7433 . + 1 ID=cds.g10687.t1;Parent=g10687.t1 NODE_1546_length_10542_cov_41.5843 . three_prime_UTR 7434 7531 . + . ID=g10687.t1.utr3p1;Parent=g10687.t1 #PROT g10687.t1 g10687 MTTAGEPGPNGHPSCTGSAGGSTTATCTALADSLAPVSDTGKLPLTDSVQTSNIITEASRAEKMLSPNFSKAISVDEHTATGTPVEAENSRLRVLVVEDNNIMQRVIGRWLKTLDVISVQCYDGGEAIRACSTQTFNLIFMDIHLPDMKGTEVSRQIRLMDNQNPRTPILAMTGEAIGPEFLAEHQMTDVLFKPVTLATFSDMVEKYRIVNANTSDASASASAALSSKAHTASPLAYPRRPSQSEIGKMSESEQELTDAVAQPDEGELAIDVMENLNTLFDSLGQLLNDKNTGLIVTRDILTSKVISQHMKRMGITVTEVNDGIARSPNWDQKKYDLIVLDAEESMKEVVSTVRSSSSVNLKTAILAFRLPGFATTGGLTSGASTPTSQQDTSSLSGSVYGQPIRRPVIAHSASSSQLSTMNWGRRRSIPFPGIGNGIGNGIGNGSDAASGNTPLQPSYSADSVSSVSSEGSGSHVQSSFALPLHSHGLSTESLSSLSSVGSATHPQSSYSLGGYPNVSGHVPLSSMAHPSHHAPVSGAPGVGVGASSAAGAFTPAPAPGSMGTSQSGLPFALGQWRTQRGVAMQRAESARTPRPDVVLEDSLGEKGSPRGRRMTLPSNSPAPTGIFAVPDAKTIRGGWNSDENVSAGDSTSRRVLSASNIAAAGSASSYNATQAKDGDIVSGGSKSPCPQSASSAFSSATSEASDGSFAAVDEEDEGTVECDIGFGSGGQSRAHSVDIPSLLFTPASTAPFASLSRSRSDARLGIPSNAFGPALTSSTLRPEGRERALSNASSTGSVHSPTVLSGKQWSSTTNLASVLGGKYDSTRPYDSYPDSGMVSPKSPTPFAGPLTAKAHKRAKSDVMGAENLHAQVSMFPSSSSFQSQTKSFDYFGQFSQDNVAAEGKDAPTAAAPRDSFGSKGTYDTRSGKNGAHTTKDVPARHPTPVASNDIVIGQLRDAVTAGEMRMFGAVLVQADHVSDSRRDDESDLRLVERALAYIRRLEEEVTRLRNAHPSSQ* # ORIGINAL: g7780.t1 original gene structure, not modified by PASA NODE_2137_length_7553_cov_42.2435 AUGUSTUS gene 256 2649 . + . ID=g7780;Name=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS mRNA 256 2649 . + . ID=g7780.t1;Parent=g7780;Name=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 256 402 . + . ID=g7780.t1.exon1;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 256 402 . + 2 ID=cds.g7780.t1;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 704 847 . + . ID=g7780.t1.exon2;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 704 847 . + 2 ID=cds.g7780.t1;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 1089 1412 . + . ID=g7780.t1.exon3;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 1089 1412 . + 2 ID=cds.g7780.t1;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 1516 1650 . + . ID=g7780.t1.exon4;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 1516 1650 . + 2 ID=cds.g7780.t1;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 1820 2649 . + . ID=g7780.t1.exon5;Parent=g7780.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 1820 2649 . + 2 ID=cds.g7780.t1;Parent=g7780.t1 #PROT g7780.t1 g7780 LTIFAHYVLLTLNFVVVCGPAHSASCPDIAITGSSQTVVFGIGSLSSASLPPVLAEHTVKSTSTVNFGASVQSCSPFMAFAEASVTTAGAASTNTNEFADRTDGNINSDVMSTGANSATAIASGTASGAASETASGTVTATAIATATSTGGSSSACSCSIALRDGSAQCFDFCTSLPFGSSFRAYWTLKAGGVADMAFTIDNPAGWIGIAFPTSSSQMRGAHAIIGYSNANSGDAVTPYILGNHDIGSPASSTNHVGVTNTDVFTVAGLLTMKFTRIVAPTNGAPSMNVDGGFTNLMWATGSVQSGFIIAHADTSGRRTGSLNFKVSNSATARSTTDYRTPHAALMVTGWGICIPVGVLIARFLRHRDPLWFQLHRVIQCIGMIVATVGFALGLYTGDGTHTAHRVIGIIVMSFGYLQIASGIFRVAKDKAHRAKWSLFHRIPGSTAMVLAVINIYLGFHILNPSLKVYIGLYSAALGLIGVAFIVCQFVIGSPNRGITKSAEVNAAPENANATKMDTLAVKVEQ* # ORIGINAL: g7781.t1 original gene structure, not modified by PASA NODE_2137_length_7553_cov_42.2435 AUGUSTUS gene 3194 7176 . - . ID=g7781;Name=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS mRNA 3194 7176 . - . ID=g7781.t1;Parent=g7781;Name=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 7164 7176 . - . ID=g7781.t1.exon1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 7164 7176 . - 0 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 6940 7070 . - . ID=g7781.t1.exon2;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 6940 7070 . - 2 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 6608 6709 . - . ID=g7781.t1.exon3;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 6608 6709 . - 0 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 6232 6364 . - . ID=g7781.t1.exon4;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 6232 6364 . - 0 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 5880 6030 . - . ID=g7781.t1.exon5;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 5880 6030 . - 2 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 5601 5719 . - . ID=g7781.t1.exon6;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 5601 5719 . - 1 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 5266 5506 . - . ID=g7781.t1.exon7;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 5266 5506 . - 2 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 4933 5141 . - . ID=g7781.t1.exon8;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 4933 5141 . - 1 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 4581 4810 . - . ID=g7781.t1.exon9;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 4581 4810 . - 2 ID=cds.g7781.t1;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS exon 3194 3454 . - . ID=g7781.t1.exon10;Parent=g7781.t1 NODE_2137_length_7553_cov_42.2435 AUGUSTUS CDS 3194 3454 . - 0 ID=cds.g7781.t1;Parent=g7781.t1 #PROT g7781.t1 g7781 MGPSGAGKTTFMDILADRRSMGRTDGVIAFNGKPRPDNFIKLCGYVEQDNILIATLTPREHLLYTALLKLPKSMDASQRETKVKQLLVDMDLEMAADVVVGDALHTGISLGQAKRLNIGIELVTSPPLLFLDEPTSGLDSAMSLDIIRVLQVISRSGILVACTLHQPSERLFARLDVLALLLRGEFVYYGKTVNAVGYFGSLGYFCPDDVNPADYIFSVISGMGDDNEVAIRQQAAVTQDGAVDTSSDSQGARAVTATADYFIESYKKSSMATERKASSMVASANAKRRNMGDTRLVVLLLRDINRAKRDSTFWSKRVLMNVIVALVLMSLFIDSPLNEAGVRNRVSLIVLIIGFFSIGANQMIGPLLEARNYYIRERQGASYQGGAYYLSNTLFEVPFSILKGVLWAGILYFSVKFDYNAGKFFFFLLVLIILADLGIALAQEFKGSDRYSQATNICLNPSTPNSCAQCAQTMVADLPWSGESILASLDVGSPPFSSIWTNLAMLVMLWGVIRIGAYLMLRFVKHNPK* # ORIGINAL: g319.t1 original gene structure, not modified by PASA NODE_1310_length_12230_cov_51.0926 AUGUSTUS gene 2574 5602 . - . ID=g319;Name=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS mRNA 2574 5602 . - . ID=g319.t1;Parent=g319;Name=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 5332 5602 . - . ID=g319.t1.exon1;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 5332 5602 . - 0 ID=cds.g319.t1;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 3976 5169 . - . ID=g319.t1.exon2;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 3976 5169 . - 2 ID=cds.g319.t1;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 3729 3781 . - . ID=g319.t1.exon3;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 3729 3781 . - 2 ID=cds.g319.t1;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 3407 3532 . - . ID=g319.t1.exon4;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 3407 3532 . - 0 ID=cds.g319.t1;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 2574 3236 . - . ID=g319.t1.exon5;Parent=g319.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 2574 3236 . - 0 ID=cds.g319.t1;Parent=g319.t1 #PROT g319.t1 g319 MEPTVTNPAVQAAMSSPQCTFIYGPTARPPGVDVPSSVDAENEYFFVADVEFTETEELSELHAYCILKELERRYKQKQIVFRWKKIERPKVGTRFVILKGNSTAPMPDDQYNWHKQETFRVWRLDDEVQLSVISSPRGTHAQIPNVEVVRNRYSLNTNISEPRPEIQLLHYVAVQRVVNPPPKVAKGGKPAAAQVATPQGKSRQFNYSNTKTPTPLPGVQQEAARKLAAAVGGGLAGNNAILNAASHAAMGMVTPQQQQRTVQTSAHKSGGAAPPKGQSMAWASTPGMTVAQAVKDQRITSSGMRPPVQPKGPDKPVTPYMRFTKVVWDGVKAQNPEVGFLDIGRKIGVLWSDLPKAEKDRYEASWRFDMSKWDVEMREFKESPAFKKYLQEKELYEAEIARDITNATAYGGAMFELPFGTPGSGQKGRPLVPGQPGQPRPVESYLPEVPEGDDGWFSERHVAALRYKRNHLCVAELLEGPVPDLGHQNVASAENEERKRVIRRKLEHTEAEIQTIRASCLRQIDECARSLETFAAKMKAAARCTTMEELERLVQSEGLPASCLEPPRPFRQLSEAAALEAASSSLTSMTEGASYVNLSGDYLNTPVSRSSPAKTTDAQMAAQSTTADGPEDKDEKAGAVDEASAAADDAIPMDVDVDGDKDDAPVGTPAEANVAVAARDVALSEVNAGNAVDDSEMTVSDAPSEGGDHNSGDDNDNDDDADDNGNDVEGQVDAASVAQDGGAVVVDGATAADDAGSGDGSADEEGAL* # PASA_UPDATE: g321.t1, single gene model update, valid-1, status:[pasa:asmbl_1173,status:12], valid-1 NODE_1310_length_12230_cov_51.0926 . gene 7833 12142 . + . ID=g321;Name=g321.t1 NODE_1310_length_12230_cov_51.0926 . mRNA 7833 12142 . + . ID=g321.t1;Parent=g321;Name=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 7833 8030 . + . ID=g321.t1.exon1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 7833 8030 . + 0 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 8156 8321 . + . ID=g321.t1.exon2;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 8156 8321 . + 0 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 8480 8772 . + . ID=g321.t1.exon3;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 8480 8772 . + 2 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 9036 9675 . + . ID=g321.t1.exon4;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 9036 9675 . + 0 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 9875 11586 . + . ID=g321.t1.exon5;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 9875 11586 . + 2 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 11773 11862 . + . ID=g321.t1.exon6;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 11773 11862 . + 0 ID=cds.g321.t1;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . exon 12050 12142 . + . ID=g321.t1.exon7;Parent=g321.t1 NODE_1310_length_12230_cov_51.0926 . CDS 12050 12142 . + 0 ID=cds.g321.t1;Parent=g321.t1;3_prime_partial=true #PROT g321.t1 g321 MDALQLVPDIEALSSRLQDLRQKGEDVCAYIDTPDKRRLQLIIEFKAMIQIMLDLCSLGVPSTTIKLAAKELMEVANLKFEPGFEERAKKVIADLFQTTSIAVDAYINHGKSSDDPIPPRAADSQSFESLPEMKGPLGFAHDALNRETQERWLSHAKEDQAPEKKHALYASVARKTRKVFSKSLYGLFSGKKKDKAAKTKDVKEASPHSSPLMTHKPPLVKQQSMGPLFFMTKMHPMGIYVPHPRAFSPLDVAPDEYIRVHLTDVIPNCKTLLTSSGSYSAAVDRPPTALYAIVVSTNMTTYGEECGGSPFGFSFVVHRRMEEISAFVDAVVAVATQAGIVGKLDQVAVAMASASTGIAGFPSVSAPTIPQWLPLHEYRRLMWQRFFDSASRLKHLRTSAVMSDFFSAGKVRPNDPDLVESWTRLDEGMYDEVINIFTPNSFIRTSGSSTDVAARDAAVQQQHHLSKSPSVSSSPAPSLRGTRKVPTAAAHASSTTPTPEPSPAPWGSPSAVAESLLMIEMLTPDSYEAGQPSHWPVVVSEVPPSEVERWTQSLLTKFSRRFSVKKETSSQQASSSPSLSSLAPGGASSAPPSTPGTPSSSAKRDTSHRATDSLAEESASLSAMASSPPSQRTDSSQKRHVLTAAAVPAPDETVPSPLPAGASARGGTAASAPGTPTTRSPIASVATAPSASTASATTASTPAEVDSATATIEPTARFITLEQMGTPDYPLGTLTLACYDGRYRPTAGNIERLIECLVCGHPSIDPAFTGAFILTCRAFSKPIELLPKVLRFFNVAPARDMATHAASSAYVATVEKAIQERVIDVVRTWADRAWHDFEAEEMQDILAEFLVHLDLRGDAFSEMASSLRTVVEAKMEPEEENVRATSRVAVAAAASALVPTPASSAIPTDEIKELRQMSLLVEDGLSKPMGRPLSISLDKLRSYSFADNIDPRRLAEQMTLSEFDMFAAIQPEALMVQLLGGGGGDALAAMARTLATYIERFNKVSYWVATTICLQPLMKLRVEVVEKFIQLAADCQALDNYNTVMAIISGLNTSSVQRLRKTWQ # ORIGINAL: g318.t1 original gene structure, not modified by PASA NODE_1310_length_12230_cov_51.0926 AUGUSTUS gene 2 1947 . + . ID=g318;Name=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS mRNA 2 1947 . + . ID=g318.t1;Parent=g318;Name=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 2 365 . + . ID=g318.t1.exon1;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 2 365 . + 1 ID=cds.g318.t1;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 647 819 . + . ID=g318.t1.exon2;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 647 819 . + 0 ID=cds.g318.t1;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 1042 1156 . + . ID=g318.t1.exon3;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 1042 1156 . + 1 ID=cds.g318.t1;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 1550 1673 . + . ID=g318.t1.exon4;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 1550 1673 . + 0 ID=cds.g318.t1;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 1907 1947 . + . ID=g318.t1.exon5;Parent=g318.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 1907 1947 . + 2 ID=cds.g318.t1;Parent=g318.t1 #PROT g318.t1 g318 DLPLSTHISQIAKVNVVVTDMSQQVLDKQLKFLASVLQKNVDKNKMTAADRDATLARITTATSLDALGDIDYAIEAVSEKIELKQSIFKTLDSVTPKHAILATNTSSISVTKIAASTKRPEQVLSVHFMNPVPVMTLVEVIPGIATSKTTLDTSIALVEAMGKTTAISQDMPGFIANRILMPYINEAVFCLQEKIGTREDIDKTMKLGTNVPMGPLQLADFIGLDTCLAIMRVLHGELGDSKYRPSPLLVKYVDAGWLGKKSGRGFYDYTK* # ORIGINAL: g320.t1 original gene structure, not modified by PASA NODE_1310_length_12230_cov_51.0926 AUGUSTUS gene 6068 7413 . + . ID=g320;Name=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS mRNA 6068 7413 . + . ID=g320.t1;Parent=g320;Name=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 6068 6258 . + . ID=g320.t1.exon1;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 6068 6258 . + 0 ID=cds.g320.t1;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 6347 6498 . + . ID=g320.t1.exon2;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 6347 6498 . + 1 ID=cds.g320.t1;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 6615 6730 . + . ID=g320.t1.exon3;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 6615 6730 . + 2 ID=cds.g320.t1;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 6838 6933 . + . ID=g320.t1.exon4;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 6838 6933 . + 0 ID=cds.g320.t1;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS exon 7042 7413 . + . ID=g320.t1.exon5;Parent=g320.t1 NODE_1310_length_12230_cov_51.0926 AUGUSTUS CDS 7042 7413 . + 0 ID=cds.g320.t1;Parent=g320.t1 #PROT g320.t1 g320 MQVRRYFLSHASVWQGRTSIAVREWQPPTTVPQRDRTVVCVHGLTRNGADFEQLATGLAQLGYRVIAPDMPGRGLSDCLYNPTDYNYGTYLRVLKMLLVGALGLRRIHYIGTSMGGLLGMHLLSDPEFYNQVDVGCCIINDVGPLVTSECLKGLAAKLSRGDPYFNSPEEHESFCRVQYGDSGIPDETVWLQIFRNGRWEHLSDGGKLRYSSACDPEIVRRFVETCPDTDLDFSAQMAEIRCGNILLIRGGLSNVLPQCEAERALSVALSSRFVCGGAVLHVVDGVGHAPQLATDAERKVVAAALDRS* # PASA_UPDATE: g4488.t1, single gene model update, valid-1, status:[pasa:asmbl_6446,status:12], valid-1 NODE_3711_length_2909_cov_42.3567 . gene 91 2799 . + . ID=g4488;Name=g4488.t1 NODE_3711_length_2909_cov_42.3567 . mRNA 91 2799 . + . ID=g4488.t1;Parent=g4488;Name=g4488.t1 NODE_3711_length_2909_cov_42.3567 . exon 91 2799 . + . ID=g4488.t1.exon1;Parent=g4488.t1 NODE_3711_length_2909_cov_42.3567 . CDS 91 2565 . + 0 ID=cds.g4488.t1;Parent=g4488.t1;5_prime_partial=true NODE_3711_length_2909_cov_42.3567 . three_prime_UTR 2566 2799 . + . ID=g4488.t1.utr3p1;Parent=g4488.t1 #PROT g4488.t1 g4488 EPILRALLSPLCALLPSKEVPGAPAGLVPNAGLIFATADILAILAASREGCQTFLNLKVVAGQKDCPSAAHLIALIVRGCLQRTLPLPLTPRCIESLVFVCRQIYNTYEGLWALRPYRIHTLLQRCVSDADSQFIDEEAVLDHLLSFSATPHGTLRLVQTGLVGSSAIFMQQRYQRRMQVSSCERFGYGFIVSQLASSAAGMLAVSRSGFVESALSDMWDHLESDRTLFGGETSSIGTANELGRKALANLIKSVASPAGLWWHLVGAQTQTQTQAQTQTMVRSTLQQHTRRHAWQSSLHGVLEMLVLSGDDADVPNCDQAHLFCLRLLSVFASCLDSYLLLESSLGFQKVLLAMQARTRIGWESGGGADGDSAPASNGAGSFIIDENSLARNYVLVATHVTGGPSERLLPPRGLDDGSSPFPFPLFSSYPTPLEYAPRPSQYAQHSSYTSAFSALARAIEASSTSSDVAASTRDLQSALRSSLRPDQPLPPVTMMVTACARMARLSTDPASADAFGCGSLTLPSLAQSPSAAVQPRHEGPLDPLGIPLVLRYGRSIGVLPPDVSAVHDKGDDVQKVTLKKGQQQTQQQPQKDSAAADLASLVRRARVLSQRGPNDPRDETGFDWFVSTAYLMFGGATDAAAEFLGDVSQTLTGAYLWYNRLAGVPVPDAVQDMPSTSSVSPWGVAHHAQFALAHAVEWLLQIELPLVLGAFRLSGFAPSQIVLQWVRQCFWNHLDWAEIVCYVTCCLAFGPDFQVYACVAVFSHLQQQILERAQSHELMPSIREEPLRGFRIADHMPLMEKLRDRHRPLVLQILRAYDARDADD* # ORIGINAL: g6365.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 7708 8737 . - . ID=g6365;Name=g6365.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 7708 8737 . - . ID=g6365.t1;Parent=g6365;Name=g6365.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 8363 8737 . - . ID=g6365.t1.exon1;Parent=g6365.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 8363 8737 . - 0 ID=cds.g6365.t1;Parent=g6365.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 7708 7902 . - . ID=g6365.t1.exon2;Parent=g6365.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 7708 7902 . - 0 ID=cds.g6365.t1;Parent=g6365.t1 #PROT g6365.t1 g6365 MRDLFHDLGARLVGGGAPRNASCPFPVPGLQSNATRAELYALCKSFTVHNTTFDIVMTFRLYPQLEPPNLPQPCKHEVLNYTAYFHARRMMRLDRGLEALRAKVLSADSPAYDVVVFSEGIHAMQPFVNDAHFDELVMAAVDIIMSAKNPPKVLVYSTIPAVIERLQSGSAGTIRVTRIATSTADWSER* # ORIGINAL: g6372.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 20822 22033 . - . ID=g6372;Name=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 20822 22033 . - . ID=g6372.t1;Parent=g6372;Name=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 21896 22033 . - . ID=g6372.t1.exon1;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 21896 22033 . - 0 ID=cds.g6372.t1;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 21472 21638 . - . ID=g6372.t1.exon2;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 21472 21638 . - 0 ID=cds.g6372.t1;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 21133 21271 . - . ID=g6372.t1.exon3;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 21133 21271 . - 1 ID=cds.g6372.t1;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 20822 20878 . - . ID=g6372.t1.exon4;Parent=g6372.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 20822 20878 . - 0 ID=cds.g6372.t1;Parent=g6372.t1 #PROT g6372.t1 g6372 MVYEDEVRLIDYALCNVTWASSVSELAKISHPNVMNLVGVSVREEPLYLVLEYVAHDNLRRFCQMIPDSQRSLHVTISLLVQLSHHIASGMAYLHSAGIVHRDLAARNVMIGTNWGEYVAKVADFGLSRNVTGDYYRKTKKGGKIAVKWQAPESIKQRIYHEHSDV* # ORIGINAL: g6368.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 11045 11835 . - . ID=g6368;Name=g6368.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 11045 11835 . - . ID=g6368.t1;Parent=g6368;Name=g6368.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 11805 11835 . - . ID=g6368.t1.exon1;Parent=g6368.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 11805 11835 . - 0 ID=cds.g6368.t1;Parent=g6368.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 11045 11331 . - . ID=g6368.t1.exon2;Parent=g6368.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 11045 11331 . - 2 ID=cds.g6368.t1;Parent=g6368.t1 #PROT g6368.t1 g6368 MAGLVAWVSVWTGMFDLGSVVAQLNATNPIIEMLRRRQHGRRALLVEFLKRTDVDSDGSAFHDLQSPWNFFRDCAGHDGDDGFSFRCFVSRSLKTISSQSRGCRM* # ORIGINAL: g6366.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 8920 10321 . - . ID=g6366;Name=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 8920 10321 . - . ID=g6366.t1;Parent=g6366;Name=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 10203 10321 . - . ID=g6366.t1.exon1;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 10203 10321 . - 0 ID=cds.g6366.t1;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 9895 10099 . - . ID=g6366.t1.exon2;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 9895 10099 . - 1 ID=cds.g6366.t1;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 9642 9772 . - . ID=g6366.t1.exon3;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 9642 9772 . - 0 ID=cds.g6366.t1;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 8920 9364 . - . ID=g6366.t1.exon4;Parent=g6366.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 8920 9364 . - 1 ID=cds.g6366.t1;Parent=g6366.t1 #PROT g6366.t1 g6366 MACASDCARRLSGKNDDLDTTKLSKEIAELLARKKAWEDRRRRTLTPHLRGKGPFVQGQIRWKWDTRLNFDIELFNETEHMLMMTFELRKTSLVRSDVVRKYNVTYEAGTAYNYDPPKEGEADAGVGYCFWGPCLYHVQHINKRGEVKMLRRAPVQVSSYRHDVANCNGSYSFHFDGLDLVSPHYRWNFSVRIDFANFEHFATPDADCTRRLGNLTLEDTSSSGCAIYHHPLTQFIPLLVNSQLTAPTFNGMITTVGTPGPPNLPAELQIVQCAAVGGPLGPSPLPRIPVAGAGLGIDQ* # ORIGINAL: g6364.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 3714 7266 . + . ID=g6364;Name=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 3714 7266 . + . ID=g6364.t1;Parent=g6364;Name=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 3714 4048 . + . ID=g6364.t1.exon1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 3714 4048 . + 0 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 4122 4950 . + . ID=g6364.t1.exon2;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 4122 4950 . + 1 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 5154 5446 . + . ID=g6364.t1.exon3;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 5154 5446 . + 0 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 5697 5908 . + . ID=g6364.t1.exon4;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 5697 5908 . + 1 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 6369 6505 . + . ID=g6364.t1.exon5;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 6369 6505 . + 2 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 6820 6916 . + . ID=g6364.t1.exon6;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 6820 6916 . + 0 ID=cds.g6364.t1;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 7169 7266 . + . ID=g6364.t1.exon7;Parent=g6364.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 7169 7266 . + 2 ID=cds.g6364.t1;Parent=g6364.t1 #PROT g6364.t1 g6364 MELAVGWRSLPRRRLIVLGATGTLLIVCALLNVLIFGYTSLVGEAGGWREASISSLDSLSTADRAYAAGGDGVQFDRNRLRNDAAIAGQRPLRGNANLKMIKKAEEHPAVAHAAPLEGVSNAVVVRPTVAPPHARSTWSSSSSASVETSTPTTETRAKALSRTPLAVRVTSATATTEKVSRSSQADDSIVVSDEGSVPVLESDHDLDVNEKFLIADICSGGQTNQLMSLAAAVNVAWALGRSLVEPVLCNSYKLSEGKGAVDPVARLFDVDVMAQFLDGCHRPTAEADAQKLKLKGSPCRVVPLNEFLNRFDPNATSASGAAALVTLGRAVDWPLPCVCLENKYGIPLPIFSSPNRAESFVYDIMRVRCASLTVVPGKVEYIGTNNVTHTVQSMHHYWEMDGVPNDGALRALRLNITKIRQLAAPHAALPVHRSPIVAVSGLFRLRVVSSGSDGDWSDFGRMKVGDLRPVNRLIDIARSFAQEMSPYLSVHARLGDFHKYCQDKFKLLGREIVCGMDISKAPHVIASVIARSNITTVVAATNGNETEIHTFETGIKALTQPLATRVLILEEAIPLHVASRNLTALDDTELLLVEKLVLGCGKTFFWSYGSTFSENAITMRQFMGCRATMTTPLPGAAREYLCTSSRDDVSAAHVPTYRCPGDPAES* # ORIGINAL: g6373.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 22688 24805 . - . ID=g6373;Name=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 22688 24805 . - . ID=g6373.t1;Parent=g6373;Name=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 24675 24805 . - . ID=g6373.t1.exon1;Parent=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 24675 24805 . - 0 ID=cds.g6373.t1;Parent=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 22999 23861 . - . ID=g6373.t1.exon2;Parent=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 22999 23861 . - 1 ID=cds.g6373.t1;Parent=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 22688 22806 . - . ID=g6373.t1.exon3;Parent=g6373.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 22688 22806 . - 2 ID=cds.g6373.t1;Parent=g6373.t1 #PROT g6373.t1 g6373 MCSPPTGLGRAVEATAATVGLALPAIQSLDAYAYSISQGLCATGYRLQRTRIETINLCQKPLSPTDDACYEPIETGEVFIRPFFEATTNRSDTDLYPSTEYRYRLQLRTRDDVFTAQEYTSLRTRPSSPPPDVRLIGVSQVSQSTLRVTWATVPDANGYVARYEVYRGLGGTYNGNVSLHLVASLGRDSRMFDDDGVDPGVRYHYVILATVDDSTERDRISLRRQLPAVASASAVTGVAQDVGLAGSGTGSGASASTGGGSSSLNVAVSVALPVATLLVCAVAMRWYYVRVRDSRRKIAHGEFLARLLESTDIAAIDIDRQAIALMEVLGSGEFGVVYRARVATMDGKIRICAVKTLKEVGMAALTSSDQ* # ORIGINAL: g6369.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 12577 17375 . - . ID=g6369;Name=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 12577 17375 . - . ID=g6369.t1;Parent=g6369;Name=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 17189 17375 . - . ID=g6369.t1.exon1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 17189 17375 . - 0 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 16915 17056 . - . ID=g6369.t1.exon2;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 16915 17056 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 16554 16747 . - . ID=g6369.t1.exon3;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 16554 16747 . - 1 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 16377 16390 . - . ID=g6369.t1.exon4;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 16377 16390 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 16004 16166 . - . ID=g6369.t1.exon5;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 16004 16166 . - 0 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 15522 15826 . - . ID=g6369.t1.exon6;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 15522 15826 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 15194 15383 . - . ID=g6369.t1.exon7;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 15194 15383 . - 0 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 14905 15057 . - . ID=g6369.t1.exon8;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 14905 15057 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 14457 14776 . - . ID=g6369.t1.exon9;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 14457 14776 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 14205 14349 . - . ID=g6369.t1.exon10;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 14205 14349 . - 0 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 13661 13852 . - . ID=g6369.t1.exon11;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 13661 13852 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 12965 13481 . - . ID=g6369.t1.exon12;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 12965 13481 . - 2 ID=cds.g6369.t1;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 12577 12790 . - . ID=g6369.t1.exon13;Parent=g6369.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 12577 12790 . - 1 ID=cds.g6369.t1;Parent=g6369.t1 #PROT g6369.t1 g6369 MSANGDRWTMPSGRVITASNDESFVRLSDRDAADVRYSFAAGVSPAARVSVLVVSFGEIIASEGTPNTFAGLIWEACITKTQDYFGQNRCLLNEDLQTTDPHFLAEYIRTFEGPPIVHVLAIGAQYALVLPTTARLVPNVAFSLIDVDVTEVLPNLQGCVFAEDQAGYVAGIVAGVVTKSRVVGIVAGVAFEPLRRFRNGFATGVGLVCQNCRVRASFLPSFFNETLAVVVADEFIEKGADVIFGCAGGAGSAAIRHAASRGAFVIGVDRDESRTTFMNSSHVDQLLGSAVKNVGLAVALSLQHRFNGTFIGGNLALDASIDGVAFSPCADASNKACTRMSEMRTVSSRFDPKSQCSSALYLNASELARQALSGLSVSKLRTGVESSSGEFTPRSRSAGNWAWSALPGFNDVPRACAFHTAVMAEDNTLIVFGGDVGGRSTNETYLLNYDLLEWKAIQHKNGSWPQARRRHCAVWHNGRMYVFGGEVLTSEVSFVNDIWEFDHREGSWSLIKPSGDLIPSARSRHSCVVLDGALFVYGGNSVMFLGDLWRFDFASKVWSRISWSFGPRDRRDHAAVLLSPSSFGVYGGEVSLNVLSDEFWKFDAGFNFTVHGCNPINRTSVVVVGGIEDSGQSSFVFNAADNVIGLYSAFAGPPDGDSIDNNSSNDYRAYFQRRLKATRLAASTASHEQFLANHFRKPAVQTKLSALEVMHDEVDLMEPLGQGEFGIVNKALLTAWGRRRICAAKLLRDSATYSDRIAFIAEAEVMSGLQTHPNVISLVGVAVNLEPMLILIEYAPYGSLRTFVQSIPPSRRTTNNTTLLLLGFALHVARGMEYLVSMGIVHRDLAARNVLVGQDAFGEYVAKLADFGLSRHTKDSSDYYRSRRGSKERLPVRWIAPEVYVKNKYSEQTDV* # PASA_UPDATE: g6370.t1, single gene model update, valid-1, status:[pasa:asmbl_5556,status:3], valid-1 NODE_309_length_27370_cov_44.508 . gene 18343 19231 . + . ID=g6370;Name=g6370.t1 NODE_309_length_27370_cov_44.508 . mRNA 18343 19231 . + . ID=g6370.t1;Parent=g6370;Name=g6370.t1 NODE_309_length_27370_cov_44.508 . five_prime_UTR 18343 18397 . + . ID=g6370.t1.utr5p1;Parent=g6370.t1 NODE_309_length_27370_cov_44.508 . exon 18343 19231 . + . ID=g6370.t1.exon1;Parent=g6370.t1 NODE_309_length_27370_cov_44.508 . CDS 18398 18967 . + 0 ID=cds.g6370.t1;Parent=g6370.t1 NODE_309_length_27370_cov_44.508 . three_prime_UTR 18968 19231 . + . ID=g6370.t1.utr3p1;Parent=g6370.t1 #PROT g6370.t1 g6370 MPRAAPQRAFAIRDRGYLRIPLCDWSGNVLDKSRLDRLREGDCVRLVLCDPDNGPGCEAIYFEITGVSYYTEGITSRPRSFRGRAMNTYRMLSENELRYVKTGEEISFQRSNIVEIPSWRLGEAPGIAPQPRKDLIAEELARIRTAENRVEREAWEAERLRLKEEKRRRKAATTAAVFIAVDADGDSGF* # ORIGINAL: g6363.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 1556 2429 . - . ID=g6363;Name=g6363.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 1556 2429 . - . ID=g6363.t1;Parent=g6363;Name=g6363.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 2423 2429 . - . ID=g6363.t1.exon1;Parent=g6363.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 2423 2429 . - 0 ID=cds.g6363.t1;Parent=g6363.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 1556 2238 . - . ID=g6363.t1.exon2;Parent=g6363.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 1556 2238 . - 2 ID=cds.g6363.t1;Parent=g6363.t1 #PROT g6363.t1 g6363 MRKRIVYLDQDVLVKNDIAPLYNMDLEGHPIAAARLCRDGALFGKQMDVRKPELAGCNPLQCSLNNGVLVYDMRLWRRSNYTAQLFEWTRLNNEKKLYKLGSQPPFNLVFDRNYKVLDKCWNTMDIAGLHDETGPVTVSPHTVSNSAVLHWNGQFKPWMCSEGYYSEIWRKYYPAYRSAAPPMSEEVVREVCDVVVVTDLDDRPVDDTSRFTVDNLALIANHMLRSDYV* # ORIGINAL: g6367.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 10716 10970 . + . ID=g6367;Name=g6367.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 10716 10970 . + . ID=g6367.t1;Parent=g6367;Name=g6367.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 10716 10970 . + . ID=g6367.t1.exon1;Parent=g6367.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 10716 10970 . + 0 ID=cds.g6367.t1;Parent=g6367.t1 #PROT g6367.t1 g6367 MPQLTSEYDKPTRSSIARRAWPRQMAATETLGDGMNTFPWQHEVQRNGGANESREETRRQHQRARPHGGQGKSIRVDSSGIITQ* # ORIGINAL: g6371.t1 original gene structure, not modified by PASA NODE_309_length_27370_cov_44.508 AUGUSTUS gene 19579 20211 . - . ID=g6371;Name=g6371.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS mRNA 19579 20211 . - . ID=g6371.t1;Parent=g6371;Name=g6371.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS exon 19579 20211 . - . ID=g6371.t1.exon1;Parent=g6371.t1 NODE_309_length_27370_cov_44.508 AUGUSTUS CDS 19579 20211 . - 0 ID=cds.g6371.t1;Parent=g6371.t1 #PROT g6371.t1 g6371 MYSLYYWTWQAFSFGESPYAAVGNAEMASHLEAGHRLSNPASCPANMCVILERCWKSLPADRPTFVELVSLTASVGAGLTQSGINPDMQSLNKQVLQVPPTPTYSRDAPAGRSRVSSFAQTFARVLRRDSRSHSAEAGAEMLPLEVNPLRARLDEFGLIGSPTDLAMEYQHSNYVITSNEVEKIGTNFREPAAAYDNFVEDEGMLSDCKK* # ORIGINAL: g1784.t1 original gene structure, not modified by PASA NODE_2597_length_5752_cov_31.9685 AUGUSTUS gene 156 1286 . + . ID=g1784;Name=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS mRNA 156 1286 . + . ID=g1784.t1;Parent=g1784;Name=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 156 313 . + . ID=g1784.t1.exon1;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 156 313 . + 2 ID=cds.g1784.t1;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 500 587 . + . ID=g1784.t1.exon2;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 500 587 . + 0 ID=cds.g1784.t1;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 826 904 . + . ID=g1784.t1.exon3;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 826 904 . + 2 ID=cds.g1784.t1;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 1193 1286 . + . ID=g1784.t1.exon4;Parent=g1784.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 1193 1286 . + 1 ID=cds.g1784.t1;Parent=g1784.t1 #PROT g1784.t1 g1784 FAKNNTAIAEAFLRFFVDVMGSYRKYMAEDESGDIVFRKEKFLKNSPKFLRKFLMVFQETQMFDVFIQDRENSSKSVVLAEGVFERRISQIEKFDAIIADTFDESELKDDSMFKRFGGKIKNLSNSSWSMLTGKNKQK* # ORIGINAL: g1785.t1 original gene structure, not modified by PASA NODE_2597_length_5752_cov_31.9685 AUGUSTUS gene 2677 5215 . - . ID=g1785;Name=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS mRNA 2677 5215 . - . ID=g1785.t1;Parent=g1785;Name=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 4928 5215 . - . ID=g1785.t1.exon1;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 4928 5215 . - 0 ID=cds.g1785.t1;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 4630 4756 . - . ID=g1785.t1.exon2;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 4630 4756 . - 0 ID=cds.g1785.t1;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 4095 4199 . - . ID=g1785.t1.exon3;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 4095 4199 . - 2 ID=cds.g1785.t1;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 3537 3701 . - . ID=g1785.t1.exon4;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 3537 3701 . - 2 ID=cds.g1785.t1;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS exon 2677 3104 . - . ID=g1785.t1.exon5;Parent=g1785.t1 NODE_2597_length_5752_cov_31.9685 AUGUSTUS CDS 2677 3104 . - 2 ID=cds.g1785.t1;Parent=g1785.t1 #PROT g1785.t1 g1785 MVNKKSGARKKAEKQRARLMDIRSGTGKDIGDYPCNDSMECDECGRRQKNRAFCYFCGAVQKLPMCAQCGKTKCMSKTGDCLVKHGQSFAVGMGMVGAICDFCEAWVCHGRKCITTHACDCVLADAVCFECKRGVWEHGGRVFRCSFCKNHLCEDDQFEHQAMCQRLETESYKCGSCNRLGYYSCLRCKICFCDDHVKRKGVKYTRGCVYPCPKCGHPTAETKDLSMSTRKIEYGRQQRAETGGDDEDDDEDGAADDPSDISAAIARSMARRQMDEDEDAGVAGAFSGLRVGGGYYYGSGGYGDEDDDDDDDDDDDDDDDDDDDDDDDDDDADGDDDDEEGDGDDDGVKKGDAKDVAAAQPAKEKGKQPA* # PASA_UPDATE: g6871.t1, single gene model update, valid-1, status:[pasa:asmbl_6743,status:12], valid-1 NODE_3932_length_2496_cov_40.5085 . gene 1315 2197 . + . ID=g6871;Name=g6871.t1 NODE_3932_length_2496_cov_40.5085 . mRNA 1315 2197 . + . ID=g6871.t1;Parent=g6871;Name=g6871.t1 NODE_3932_length_2496_cov_40.5085 . five_prime_UTR 1315 1412 . + . ID=g6871.t1.utr5p1;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . exon 1315 1502 . + . ID=g6871.t1.exon1;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . CDS 1413 1502 . + 0 ID=cds.g6871.t1;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . exon 1735 1800 . + . ID=g6871.t1.exon2;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . CDS 1735 1800 . + 0 ID=cds.g6871.t1;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . exon 2012 2197 . + . ID=g6871.t1.exon3;Parent=g6871.t1 NODE_3932_length_2496_cov_40.5085 . CDS 2012 2197 . + 0 ID=cds.g6871.t1;Parent=g6871.t1 #PROT g6871.t1 g6871 MAQPVENWYMEVPVITRFYVTACVLTSLACQLHFVTFLQLYFNWHLIVHKFQVYRLVTNFLYFGTLGLDLLFHMFFLYRYSRYLEEGSFRGRTADYFYMLLFGATLMTVGVVL* # PASA_UPDATE: g6870.t1, single gene model update, valid-1, status:[pasa:asmbl_6744,status:12], valid-1 NODE_3932_length_2496_cov_40.5085 . gene 246 1029 . - . ID=g6870;Name=g6870.t1 NODE_3932_length_2496_cov_40.5085 . mRNA 246 1029 . - . ID=g6870.t1;Parent=g6870;Name=g6870.t1 NODE_3932_length_2496_cov_40.5085 . five_prime_UTR 910 1029 . - . ID=g6870.t1.utr5p1;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . exon 907 1029 . - . ID=g6870.t1.exon1;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . CDS 907 909 . - 0 ID=cds.g6870.t1;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . exon 562 636 . - . ID=g6870.t1.exon2;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . CDS 562 636 . - 0 ID=cds.g6870.t1;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . exon 246 362 . - . ID=g6870.t1.exon3;Parent=g6870.t1 NODE_3932_length_2496_cov_40.5085 . CDS 246 362 . - 0 ID=cds.g6870.t1;Parent=g6870.t1;3_prime_partial=true #PROT g6870.t1 g6870 MLVLVLGDLHIPHRSNDLPAKFKKLLVPGKIQHILCTGNLCCKETYDYLKALASDVHVVKGDFDE # ORIGINAL: g4511.t1 original gene structure, not modified by PASA NODE_3352_length_3667_cov_80.0866 AUGUSTUS gene 1 800 . - . ID=g4511;Name=g4511.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS mRNA 1 800 . - . ID=g4511.t1;Parent=g4511;Name=g4511.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS exon 1 800 . - . ID=g4511.t1.exon1;Parent=g4511.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS CDS 1 800 . - 0 ID=cds.g4511.t1;Parent=g4511.t1 #PROT g4511.t1 g4511 MTLKFNTDVSRVTPFLSTRNVDQIDSSNDRRTLVSSDIDVYLKRGSRIMYPEKKRTAPFGRTRLRLSLELTFSEVILTNDVLVANVTAPIVSDSGMTLLRTADFPPWSTTLFPDMSFAAIFNPQSCFDPNQHDKLNITCTFTALFSEKVVNREREDIDGREFSMFVGGNLTIVPFTLIGTGGKYGDNSYEISFSFPKSTFTSVEISVGCITNRIQSLNTGLIVDDKPRRLYVNTQLCGTADLLQTRYYYKEMLSNATKDGRGCERM # ORIGINAL: g4512.t1 original gene structure, not modified by PASA NODE_3352_length_3667_cov_80.0866 AUGUSTUS gene 2697 3575 . - . ID=g4512;Name=g4512.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS mRNA 2697 3575 . - . ID=g4512.t1;Parent=g4512;Name=g4512.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS exon 2697 3575 . - . ID=g4512.t1.exon1;Parent=g4512.t1 NODE_3352_length_3667_cov_80.0866 AUGUSTUS CDS 2697 3575 . - 0 ID=cds.g4512.t1;Parent=g4512.t1 #PROT g4512.t1 g4512 MSYKTARETIMKSEKIDVIQIARSSNYHVTVTTGDPDLSDEFIEAFNGLPDPECCMAGGRLAVSPCAALCDRYDEMVEKFGMFYASEVSLGVKVYRRMTITRTFLENMERMEMGVKSSVSYSAGGVSLASKLSVTIQQQAKDMKDEKSVSQSWYIFGGDPSKATFDPENFDDVEGLLQHAATGRDNALPMSYKLIPISRILKAEKFPGLARFEEKRAYLIETMENVCVADGVGCSFEDEQSESAVRYGDLMTLSFSDPQNESYSLCVASNSNQVTVRSIGLKSGNINLHNLY* # ORIGINAL: g2328.t1 original gene structure, not modified by PASA NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS gene 835 1991 . - . ID=g2328;Name=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS mRNA 835 1991 . - . ID=g2328.t1;Parent=g2328;Name=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS exon 1892 1991 . - . ID=g2328.t1.exon1;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS CDS 1892 1991 . - 0 ID=cds.g2328.t1;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS exon 1513 1796 . - . ID=g2328.t1.exon2;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS CDS 1513 1796 . - 2 ID=cds.g2328.t1;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS exon 1229 1291 . - . ID=g2328.t1.exon3;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS CDS 1229 1291 . - 0 ID=cds.g2328.t1;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS exon 1083 1089 . - . ID=g2328.t1.exon4;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS CDS 1083 1089 . - 0 ID=cds.g2328.t1;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS exon 835 989 . - . ID=g2328.t1.exon5;Parent=g2328.t1 NODE_3997_length_2382_cov_33.1808_potentialcontaminant AUGUSTUS CDS 835 989 . - 2 ID=cds.g2328.t1;Parent=g2328.t1 #PROT g2328.t1 g2328 MTPIYVASVKLDLASVRLLLEFGANASLGADHLSSSGSVEIAKALAVGGADLHPECVLESIANFGLDVLKHFLASGLSIELSASGCNASLDMLRYFLNHVTNFATSYAGVDTLVFSCPQLGLSDLSEVAEPCGTEVGRGASDDMRGSREYSADGNSYVPTLQHLCRRVIIAHDLKFADPDVGLPQHLVDYLSESDTVVNEML* # PASA_UPDATE: g10572.t1, single gene model update, valid-1, status:[pasa:asmbl_7074,status:12], valid-1 NODE_4186_length_2058_cov_34.2295 . gene 117 1965 . - . ID=g10572;Name=g10572.t1 NODE_4186_length_2058_cov_34.2295 . mRNA 117 1965 . - . ID=g10572.t1;Parent=g10572;Name=g10572.t1 NODE_4186_length_2058_cov_34.2295 . five_prime_UTR 1962 1965 . - . ID=g10572.t1.utr5p1;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . exon 1882 1965 . - . ID=g10572.t1.exon1;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . CDS 1882 1961 . - 0 ID=cds.g10572.t1;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . exon 1449 1620 . - . ID=g10572.t1.exon2;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . CDS 1449 1620 . - 1 ID=cds.g10572.t1;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . exon 874 1093 . - . ID=g10572.t1.exon3;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . CDS 874 1093 . - 0 ID=cds.g10572.t1;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . exon 117 559 . - . ID=g10572.t1.exon4;Parent=g10572.t1 NODE_4186_length_2058_cov_34.2295 . CDS 117 559 . - 2 ID=cds.g10572.t1;Parent=g10572.t1 #PROT g10572.t1 g10572 MVDGGQEADEAYCTFGSTEHMSFLKQRMKELLSQREAAERLQLEAKEAVDSALTELDALSSQLSSIKAKAGDKDSGSSTSATHHTVHQFGNIENIEAIHDEDEAKRERDWALRMLYRPPRARQYFIGKTLYREMEERKTSWIELFYDLVFVGVVAKLGDNFQEDPTQASLHHFVLLFMPIFRMWGEFHLYLNRFDTHDLFHRVMIFCFISSVVFMGSSAADAFVEGGSGSSYSGGMCVCRAIIMCMYIPVAVRLEHFRGQTLVFLCHQTVSVSPWFISIFVADTYQVRENGLVTSGMQISLLCW* # ORIGINAL: g14097.t1 original gene structure, not modified by PASA NODE_3518_length_3282_cov_42.773 AUGUSTUS gene 2314 2955 . + . ID=g14097;Name=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS mRNA 2314 2955 . + . ID=g14097.t1;Parent=g14097;Name=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS exon 2314 2332 . + . ID=g14097.t1.exon1;Parent=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS CDS 2314 2332 . + 0 ID=cds.g14097.t1;Parent=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS exon 2459 2693 . + . ID=g14097.t1.exon2;Parent=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS CDS 2459 2693 . + 2 ID=cds.g14097.t1;Parent=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS exon 2784 2955 . + . ID=g14097.t1.exon3;Parent=g14097.t1 NODE_3518_length_3282_cov_42.773 AUGUSTUS CDS 2784 2955 . + 1 ID=cds.g14097.t1;Parent=g14097.t1 #PROT g14097.t1 g14097 MGRKKDVKKLATKAKAVASAQTTGMDVDGGGWWVPGDDGAGPVSTESMDMKDDAAQQQTAILQNTAPKFPRVKGVDANAIPVFRSQGDLGKVKKAKKLSAKANKRKEEMVERALSIMDKKDKKTTALTKSKALRDKWKNLY* # PASA_UPDATE: g14096.t1, single gene model update, valid-1, status:[pasa:asmbl_6170,status:12], valid-1 NODE_3518_length_3282_cov_42.773 . gene 1 1783 . - . ID=g14096;Name=g14096.t1 NODE_3518_length_3282_cov_42.773 . mRNA 1 1783 . - . ID=g14096.t1;Parent=g14096;Name=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 1660 1783 . - . ID=g14096.t1.exon1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 1660 1783 . - 0 ID=cds.g14096.t1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 1411 1484 . - . ID=g14096.t1.exon2;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 1411 1484 . - 2 ID=cds.g14096.t1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 1218 1299 . - . ID=g14096.t1.exon3;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 1218 1299 . - 0 ID=cds.g14096.t1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 730 1092 . - . ID=g14096.t1.exon4;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 730 1092 . - 2 ID=cds.g14096.t1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 336 434 . - . ID=g14096.t1.exon5;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 336 434 . - 2 ID=cds.g14096.t1;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . exon 1 87 . - . ID=g14096.t1.exon6;Parent=g14096.t1 NODE_3518_length_3282_cov_42.773 . CDS 1 87 . - 2 ID=cds.g14096.t1;Parent=g14096.t1;3_prime_partial=true #PROT g14096.t1 g14096 MAQIAGAEVMIQKLTQQIKVATEQKMKAEENLQKLKTLSQKAFAEFNEMKVRVEEERKAKNEAYAMLETSVHETETLKSKLENTQKMLQKITQTAKIAFAEFSDLKEKYQLECYTRQEAENYAAKLLEDIKVLEEDHQRRLRAEVKSLETAVAPTSAADKTAVESLRADIDRLIKNLEEERALRLVSDGKVNTLTAEIEDIRSSASGDGVARMDDLSGQLRKLENELLEAEQRARNWEERYNEAEQRALNAGSGGGFGGPPPPPGAGGPPPPPGGP # ORIGINAL: g2603.t1 original gene structure, not modified by PASA NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS gene 7858 11056 . + . ID=g2603;Name=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS mRNA 7858 11056 . + . ID=g2603.t1;Parent=g2603;Name=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 7858 8190 . + . ID=g2603.t1.exon1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 7858 8190 . + 0 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 8756 9443 . + . ID=g2603.t1.exon2;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 8756 9443 . + 0 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 9540 9754 . + . ID=g2603.t1.exon3;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 9540 9754 . + 2 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 9861 9975 . + . ID=g2603.t1.exon4;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 9861 9975 . + 0 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 10056 10104 . + . ID=g2603.t1.exon5;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 10056 10104 . + 2 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 10188 10373 . + . ID=g2603.t1.exon6;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 10188 10373 . + 1 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 10457 10590 . + . ID=g2603.t1.exon7;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 10457 10590 . + 1 ID=cds.g2603.t1;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 10692 11056 . + . ID=g2603.t1.exon8;Parent=g2603.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 10692 11056 . + 2 ID=cds.g2603.t1;Parent=g2603.t1 #PROT g2603.t1 g2603 MEQLAIVLRGCVRAQRGGWVQSATWRVQATATAPTAPSRVSARTEQHATGLPERARAPQGGRAPCATSSAAADNTGRIVPYRAHVATAAATDSTAPAHARQGRAFTDRLAHVGDVLTFLDTDVAINQGYSYYLRAYNGRNVSSETDALAGIKNLQKTDRPSPPYNVSSTPTLNPDNKQQSMIKFTWKEDTSSGPIIKTFIFRDDRLVLVGLTATEYKDWNVEFGKTYVYEIISVNQYGNSTTTRFSETASVGPADSGSPTAGASSSGNVAGPVAGGVVGAIAGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVALIKAAVKMFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKSSDFSSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAHNTIENGWKLSPKAQVIVKVADMGLSRDTTTTDYYMAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLAYAAMETCWRKHAETRPQFSQLVLQLRRGMAVLCGTEGGGGNLGGANTTDSATELGQSETYALTVPEGAYAETIKPDEDGNLHTLQNLLFQKDNISITGHSSA* # ORIGINAL: g2602.t1 original gene structure, not modified by PASA NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS gene 1267 2265 . + . ID=g2602;Name=g2602.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS mRNA 1267 2265 . + . ID=g2602.t1;Parent=g2602;Name=g2602.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS exon 1267 2265 . + . ID=g2602.t1.exon1;Parent=g2602.t1 NODE_1277_length_12448_cov_22.7646_potentialcontaminant AUGUSTUS CDS 1267 2265 . + 0 ID=cds.g2602.t1;Parent=g2602.t1 #PROT g2602.t1 g2602 MQDAYAVPFVDDVLDALHGNAMIYAAKFLANLTTGIGTLATDSRLDIVIGRSISAMFHLSDLNDDCTSNAARSLCKTIIRLSSQRHKGLHTHGANLANALLILASKAPQGGCDRPHICKLAATLAQLVYCLMPEMSWKNVQPDRLPGDQTEVPCAISGWLVNPKVRQEWQWMFSAAWFFINTARHDGPLVSGPLFTCDRLSRAVASIAVVLERIPTVSLPLRWQVWVDATQPLADEAEAELQVGLCRSGIHPEFARRFNNSHLADIMTPADLASNIIRCRIDRLRESFDDLTSEVILQDLEGVLSPRRHVSLARQPEMYIAPDLPRQSFFEQ* # ORIGINAL: g6005.t1 original gene structure, not modified by PASA NODE_2987_length_4590_cov_41.9429 AUGUSTUS gene 3089 4339 . - . ID=g6005;Name=g6005.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS mRNA 3089 4339 . - . ID=g6005.t1;Parent=g6005;Name=g6005.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS exon 3089 4339 . - . ID=g6005.t1.exon1;Parent=g6005.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS CDS 3089 4339 . - 0 ID=cds.g6005.t1;Parent=g6005.t1 #PROT g6005.t1 g6005 MVLARGGTHATVHPSPNNTSGAAVDAGKMEASSVGEREATAIKSASKMTKSSGKAAHDKARSRFLMQYMLGYSASVCVFFTIVYLFFVERALLPHFYAVSVVALVGVRWVYYYRKRWHHFCIDFCYLGNTLLIVYIYLLPKEPRLFSIIYALANGPIATAIILFGNGFVPTSLDKCTSAYIHALPPVVTYVLRWHNPDDAYAVCLGDACESSVFWTLVAPVLVFIAHNAVYFLYVEVLPHAKLRADPRYLNLFTYVSATWSTSKYAFLRRLDTSRRGKKLFAYYTVTWLVCVVTMAPSIFYYRNKDVNTAFLAIIGLGCMLNGGAVYASMLWQRSQMKEAQINAAHASSIAQSSGNKTRKIDGLDIPGIGVEGECVTEAGEGESADRRCAKCAVSRADTHIMSKATSGVSRRRARV* # ORIGINAL: g6004.t1 original gene structure, not modified by PASA NODE_2987_length_4590_cov_41.9429 AUGUSTUS gene 468 2195 . + . ID=g6004;Name=g6004.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS mRNA 468 2195 . + . ID=g6004.t1;Parent=g6004;Name=g6004.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS exon 468 2195 . + . ID=g6004.t1.exon1;Parent=g6004.t1 NODE_2987_length_4590_cov_41.9429 AUGUSTUS CDS 468 2195 . + 0 ID=cds.g6004.t1;Parent=g6004.t1 #PROT g6004.t1 g6004 MSDLPVEGTAAATGASSTSSAALNASTPSTPSTSSTLTHGHGDDALRATLEARVLGQVERWAGERGQGRRLVTTEGVHIERRTTLALDVTQPATDATARSPPSQDVPSSLTRDASLAADTYVEPARRIPVLTECDVLVVGGGPAGLSAAIGAARAGADVVLMERFGCFGGCITTVGMETLAWYRYEGTTDVEGVGIEMERLAAQMGGTVKFPYNDSECLDADFFKLVADHLVRANGIRPLLHTFAVDVIMEGWRIAGVITESKSGRQAIRAKRVVDCTGDADIAFLAGARYVKYEPDKMMGVTTVFCASNVDKKRFLEYTETRKATYRDWDWGEFKQETTGKEDVLRSPYLDSEFRQAASDGVVSAEDMSARGVAIGGTWSSLTDAGEATNLNLIHMSGVDGTNVIDLTRAEMEGRRQVPHALAAMRHTLPGFEKAKLRNISTTLGVRDTRKIVGRYNLTREDVVSQAKFPDSVGIFPEFLDGYNILILPTTGRYFEVPYGILVTPDVDNLLVGGRCVAGDRPSHTAMRNMMACTVTGQGAGVAAAVSLRTGTTTTDVDIGDVQGELVRQGVRIH* # ORIGINAL: g7615.t1 original gene structure, not modified by PASA NODE_3191_length_4053_cov_49.4542 AUGUSTUS gene 1517 4053 . + . ID=g7615;Name=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS mRNA 1517 4053 . + . ID=g7615.t1;Parent=g7615;Name=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 1517 1757 . + . ID=g7615.t1.exon1;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 1517 1757 . + 0 ID=cds.g7615.t1;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 1913 1997 . + . ID=g7615.t1.exon2;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 1913 1997 . + 2 ID=cds.g7615.t1;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 2188 3529 . + . ID=g7615.t1.exon3;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 2188 3529 . + 1 ID=cds.g7615.t1;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 3626 3856 . + . ID=g7615.t1.exon4;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 3626 3856 . + 0 ID=cds.g7615.t1;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 3982 4053 . + . ID=g7615.t1.exon5;Parent=g7615.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 3982 4053 . + 0 ID=cds.g7615.t1;Parent=g7615.t1 #PROT g7615.t1 g7615 MDVTFTYIFQKETRSVAVPNDLATSVKVLISYIRARHGDISPEVRVRGTAGDEPECSVLLTDRLDDKLVYHFKKIDGLKCEVSEYSSTRKHELIAKVCEAISGLSDDSVFKRRTQYLADCNIVRAAAFVQPGDDPTKESLDLLLTEEPRTAISQRPNKLSESVQRMLGTTDRSLNLTLTKFDHLALTMALGANEDAVLHAWERVLEIMVRYPPDVETVCAPEFPIHALKAMPLTDAFLASAGLIHAVYPQWKLRNLSPSLPERFVDFAGLIRDSRASRYFPFLLAEVAPESRPENCDHKDTKKMGRMLGLCVEAIVQNLTLVLKTEQLREVRVFGLLFAGDGVEVVAAVPHIVVDDGIVRMTTIFHEGLAYITLNNSDGVVKFSEWCDRIAEAGKKLSSFCEKNGKRCFFHPKNLDVPSSNASHLAPTPGTTASATTSLRSATTASTASTSNAKGSGAQGGGHTDPTSSGKSEQKGNPTSKGASGGRAPKKTPPPRQDELGGNKNCLAIGLASTGSDSGITACNSSPTDVLDTKRLFMACVRAAGVAGYPSREVYKSSTTRAWFVRGEIANFAVVVKRGRSELEIAVLLEFANNNSIVTLRAHVPGGGDGRKYGLVMDWLDAETPTAKATPIMGLCFLRDSLEALLCLHSAGYVHRD # ORIGINAL: g7614.t1 original gene structure, not modified by PASA NODE_3191_length_4053_cov_49.4542 AUGUSTUS gene 1 628 . - . ID=g7614;Name=g7614.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS mRNA 1 628 . - . ID=g7614.t1;Parent=g7614;Name=g7614.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 314 628 . - . ID=g7614.t1.exon1;Parent=g7614.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 314 628 . - 0 ID=cds.g7614.t1;Parent=g7614.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS exon 1 102 . - . ID=g7614.t1.exon2;Parent=g7614.t1 NODE_3191_length_4053_cov_49.4542 AUGUSTUS CDS 1 102 . - 0 ID=cds.g7614.t1;Parent=g7614.t1 #PROT g7614.t1 g7614 MRLISVCIALCIAFSLLVIAVSLSNAADARRALSISADTEGSASLRLNGVNKTLVLDSGVNGTVVVNGVDLLDKLKQLQALVDWQQAAINRQQIAINKLLEAAKTQFKAMSRIAAASQQVSGWQRLRFDTSEYDTIGGI # PASA_UPDATE: g10933.t1, single gene model update, valid-1, status:[pasa:asmbl_6038,status:12],[pasa:asmbl_6039,status:12], valid-1 NODE_3415_length_3513_cov_33.5781 . gene 64 3311 . - . ID=g10933;Name=g10933.t1 NODE_3415_length_3513_cov_33.5781 . mRNA 64 3311 . - . ID=g10933.t1;Parent=g10933;Name=g10933.t1 NODE_3415_length_3513_cov_33.5781 . five_prime_UTR 3283 3311 . - . ID=g10933.t1.utr5p1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 3085 3311 . - . ID=g10933.t1.exon1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 3085 3282 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 2759 2947 . - . ID=g10933.t1.exon2;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 2759 2947 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 2142 2449 . - . ID=g10933.t1.exon3;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 2142 2449 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 1739 1856 . - . ID=g10933.t1.exon4;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 1739 1856 . - 1 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 1415 1501 . - . ID=g10933.t1.exon5;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 1415 1501 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 1146 1217 . - . ID=g10933.t1.exon6;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 1146 1217 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 608 769 . - . ID=g10933.t1.exon7;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 608 769 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . exon 64 260 . - . ID=g10933.t1.exon8;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . CDS 138 260 . - 0 ID=cds.g10933.t1;Parent=g10933.t1 NODE_3415_length_3513_cov_33.5781 . three_prime_UTR 64 137 . - . ID=g10933.t1.utr3p1;Parent=g10933.t1 #PROT g10933.t1 g10933 MSAFSRRFRELHATAAREDRTDGVFDLFAMADVDVSLTEILDIASIDSRDGRALANFVYMRPRMASMETLGSLEENRATYIRRLGKFFRVVGQDIGDVFFVGYSRSTPVVMDLVANIAKREAELPWAKKVRGIVGLDGVVWGTPLADCAFADQPPASECGDLQIAVTQLLSLADALTPNNNRSTVLSNTYKWGSTLSRILSTFITGGLPEAMKKYSVVSPSIQATWSGIIRKMFFDEFDLGSFAKSYTKNVERFRLLVKKAVNGAMVLTTKARLDWHRANELPSDRAYVAISATQYDPELVGPSHIDPKKTSPDYFFLRTCYYQIYDFAKSRLNDGQVPVQRELFSSSIHMSLNAKQTPYKFFWATVVGSDHWGDAFPVAFDTNDKWVNPFPRSVFAKTIANYAAWILAQNPAFKTKA* # PASA_UPDATE: g10074.t1, single gene model update, valid-1, status:[pasa:asmbl_4910,status:12], valid-1 NODE_2732_length_5297_cov_78.3975 . gene 54 2861 . + . ID=g10074;Name=g10074.t1 NODE_2732_length_5297_cov_78.3975 . mRNA 54 2861 . + . ID=g10074.t1;Parent=g10074;Name=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 54 341 . + . ID=g10074.t1.exon1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 54 341 . + 0 ID=cds.g10074.t1;Parent=g10074.t1;5_prime_partial=true NODE_2732_length_5297_cov_78.3975 . exon 468 573 . + . ID=g10074.t1.exon2;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 468 573 . + 0 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 819 966 . + . ID=g10074.t1.exon3;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 819 966 . + 2 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 1152 1250 . + . ID=g10074.t1.exon4;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 1152 1250 . + 1 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 1463 1871 . + . ID=g10074.t1.exon5;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 1463 1871 . + 1 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 2020 2196 . + . ID=g10074.t1.exon6;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 2020 2196 . + 0 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 2440 2485 . + . ID=g10074.t1.exon7;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 2440 2485 . + 0 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . exon 2697 2861 . + . ID=g10074.t1.exon8;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . CDS 2697 2782 . + 2 ID=cds.g10074.t1;Parent=g10074.t1 NODE_2732_length_5297_cov_78.3975 . three_prime_UTR 2783 2861 . + . ID=g10074.t1.utr3p1;Parent=g10074.t1 #PROT g10074.t1 g10074 TDASQSNAALFQRSFSPAHAHTAPVLLPPPLAQPFPPPAAPVTPGGVAAASALAPVTAPTLGEGVAGAPDRMGKRKASVVGDADAPPPQKRPAAIKDGVVPQPMALPAVQVVTGSPESPGISLETAQVNAALYKLTCLSGGAMSWETLLPSRPQRVDGSRTVIAATLEDGSLVTFSAAGCRLLPPVFVGAPCKWLSVADELVLVVGGDDTLHVWEPRRSVCVMRESSLAAVVAQQPPGTGVSFVFLSQPVGVLPSGMCESDCTPRTPVVRLTNDRVYAYKKELMAWVLVGARGCPLTGSSEYSGIPRVPGFASGPLATMQSGLAGDMRVSIGSMRTMHSAQASTTLAHLETQMVAARTVGSPAEWEYWLHTYARRLAEEGHVTRLRELCEGLIGMGAGARELSAYGNAPIARRIQVMRGLLPVIASRAGASIHMQRFVSEFEESLDDFESSL* # ORIGINAL: g10075.t1 original gene structure, not modified by PASA NODE_2732_length_5297_cov_78.3975 AUGUSTUS gene 3340 4706 . + . ID=g10075;Name=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS mRNA 3340 4706 . + . ID=g10075.t1;Parent=g10075;Name=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS exon 3340 3569 . + . ID=g10075.t1.exon1;Parent=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS CDS 3340 3569 . + 0 ID=cds.g10075.t1;Parent=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS exon 3702 4185 . + . ID=g10075.t1.exon2;Parent=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS CDS 3702 4185 . + 1 ID=cds.g10075.t1;Parent=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS exon 4284 4706 . + . ID=g10075.t1.exon3;Parent=g10075.t1 NODE_2732_length_5297_cov_78.3975 AUGUSTUS CDS 4284 4706 . + 0 ID=cds.g10075.t1;Parent=g10075.t1 #PROT g10075.t1 g10075 MESNAMDVDFDASLDRFRSAFAAHKNTAENTTTTNSSNDMGGSSYAEISVDAKSRRSFSEPASRTSPRRQKISVMNAAPLHVLRETKKGKSTEELELERIEAARADFAKARAVAMQGLKRLGETAGLAFMPRRSSQPLTEPREFKMHTAARSASRPQSRAASEPPAPIARGQPASRAPSSSRSRAPSSSRMSLRMTPQRKARIARTAAKNNDAHHVPGRGSVLSRKFNAATARMNSAPARRDPLHNNENKPPSNAFAVPVAAANAKKQTASAPKSSVSAPTAPKTRVELTQPRTPKFATSRRVRSAVTPALSTEERELLAIRSAPKFKAAPVNYRVFESAGEVGVPRVAKREITKAKSPKFASDRRILSRHQVEAMQH* # ORIGINAL: g11062.t1 original gene structure, not modified by PASA NODE_815_length_17363_cov_43.5134 AUGUSTUS gene 157 797 . - . ID=g11062;Name=g11062.t1 NODE_815_length_17363_cov_43.5134 AUGUSTUS mRNA 157 797 . - . ID=g11062.t1;Parent=g11062;Name=g11062.t1 NODE_815_length_17363_cov_43.5134 AUGUSTUS exon 636 797 . - . ID=g11062.t1.exon1;Parent=g11062.t1 NODE_815_length_17363_cov_43.5134 AUGUSTUS CDS 636 797 . - 0 ID=cds.g11062.t1;Parent=g11062.t1 NODE_815_length_17363_cov_43.5134 AUGUSTUS exon 157 272 . - . ID=g11062.t1.exon2;Parent=g11062.t1 NODE_815_length_17363_cov_43.5134 AUGUSTUS CDS 157 272 . - 0 ID=cds.g11062.t1;Parent=g11062.t1 #PROT g11062.t1 g11062 MATASESPDIVMIRTHPPDTWAAYRRPLSLFMVNANIAIYAGMFWLTMPVLPFLTSSLGVDPTGFGYLQTTFAFIQLLGGPVMGRLIDLRGA # PASA_UPDATE: g11063.t1, single gene model update, valid-1, status:[pasa:asmbl_9517,status:12],[pasa:asmbl_9518,status:12], valid-1 NODE_815_length_17363_cov_43.5134 . gene 2326 8207 . + . ID=g11063;Name=g11063.t1 NODE_815_length_17363_cov_43.5134 . mRNA 2326 8207 . + . ID=g11063.t1;Parent=g11063;Name=g11063.t1 NODE_815_length_17363_cov_43.5134 . exon 2326 3600 . + . ID=g11063.t1.exon1;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . CDS 2326 3600 . + 0 ID=cds.g11063.t1;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . exon 3944 7098 . + . ID=g11063.t1.exon2;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . CDS 3944 7098 . + 0 ID=cds.g11063.t1;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . exon 7319 7516 . + . ID=g11063.t1.exon3;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . CDS 7319 7516 . + 1 ID=cds.g11063.t1;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . exon 7671 8207 . + . ID=g11063.t1.exon4;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . CDS 7671 8166 . + 1 ID=cds.g11063.t1;Parent=g11063.t1 NODE_815_length_17363_cov_43.5134 . three_prime_UTR 8167 8207 . + . ID=g11063.t1.utr3p1;Parent=g11063.t1 #PROT g11063.t1 g11063 MHSFDVSGALNGAPLTFGEGGVVEEALRQASAQTAVDPSHAVRVAANIQTPFMWNTTAANLIFSPGDNVSVEIDGGRLPCVCTAVNMASAACGTVVVASGTLIVTNLTLSNCTGRTPLVDLPPCALFRVMGTGRLEIRNSSFVQLLNMRLVLVEGDGTARIVGTHGSKMRLPAEPAVLAGVFRNAFLSVEQSTFSDLYAGPSVWSASEPGGGAFSVRGRARLLITQCVFSRVISGGSGGIVYAAEYSKAELRDSSFSDLSANTNGGLAALGTMFGVPAVLTLVTRSVLIIDRCTVVRTSCGDSGGAIQLAMSHTATITRSFFDGVSSDTAAGFASVRNFATLTMSETVVQSASALLDGGVFGLGTSLVYVDVPVTETNITRVVGLQAGGVNVTDSTFLGASVNGLLILEDFVFGGNGGFTSMEDESVLRLTNCTVSDIFAAQRGGVVFAGSQALFVATASTFERARADKVGGSLVSLESRSVVLMDQCVARDLSTGGPSGGAFSVTKKASARVTRSSFSLVYADAGDGGFASISDDAFMSITDGSTVTFARSKLSGGVFRLSGRATALVTNATFSVGTAEVGFGGFASLSESANLSLLGVAVTNVSALAGGGFLRISDEAHVDIANTSITGARALAGVGGLVQLEGTASLRATRMIVSNAFAARKGGAFVSVGSSTATFASSLFYNCTSQREGGGFGHLSDGATVEMNACTVQDVSALDSGGAFDVRDGSSLAVLGSRFTGLRTTGRGGFLNLADRVSVVVKSTVCEDSAASDPGGALSLTGSSSASVEMCTFRRSRSGASGGFSDVQDDASLSVSHSHVDQVMAELSGGSISVKGRGYVGITETSFVGSESLRGNGGFACAREGSRVVAVNVNVTSASAGQKDDQLAGAGSGCGSSDGGALFVGDRASAHFVGALITNSTSSGSGGCVAVGAGEANVTMASCTVAHSAAFRGGAVYVGSMSRVSMHESVVRGASALGDGGCIFSDADGVATMADVALEDCLAGGQADLFGAGGAIYLGPGAYLKLEGASTAQGLRAARGPAIFSVTPINDTDVALLTVSDFASVFVSPPLAEEWEAGGALSGVAAHVRYADADVHVEGPGKIVPSLRLSVFDYYGNPVSLPGNAPLSFALHAIWPTTTCAVSDPYCERACITNSPTSNTNTNTNTNINTITNQADCPIPCDGETCAILGSVEGDFGASSFTTMRAFSVFAPPGTYKVRAVSKNPFLYGPLDSSQDRRALLNRTLLTLTVGPCPSGYVPGVLDSPRLYGCRIDTLSSSVGSGGSSGLALALGLAVPLCAAVVVAAVALVVISRRRQRAMEEREAHAAFIEKYLSKETALANLEVGRECVELLEVLGEGEFGVVMKARVFLEGRPRVCAAKMMKEGGSVDERVAFMREASCMLDARHPNLVCLAGVVLRDDPPIILVEYVPHGNLLSFVRSVPTGNRESSSTTAMLEAFALDIAEGLRYLHAINIVHSDLAARNCLVSLDSFGGYLIKVSDFGLAREIGIKSYFRRGGKKERLPARWLSVEAMTEGRFGPESDVWSYGVTLFEAYSFGAIPYAGIPNASLLEHIASGNRLSRPPACPVDMFCNIISPCWASSPSDRPTMSEIATALVAQTAERASAAAAASTQAQLVPPIPTESAYSNPVPSETVTATNKPACRRSQSNDMCIGNGDSQPRYLFSGDAADDEDSSAIELRARYDDSMC* # PASA_UPDATE: g11064.t1, single gene model update, valid-1, status:[pasa:asmbl_9519,status:12], valid-1 NODE_815_length_17363_cov_43.5134 . gene 8741 13880 . - . ID=g11064;Name=g11064.t1 NODE_815_length_17363_cov_43.5134 . mRNA 8741 13880 . - . ID=g11064.t1;Parent=g11064;Name=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 13760 13880 . - . ID=g11064.t1.exon1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 13760 13880 . - 0 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 12932 13368 . - . ID=g11064.t1.exon2;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 12932 13368 . - 2 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 12340 12642 . - . ID=g11064.t1.exon3;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 12340 12642 . - 0 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 11957 12149 . - . ID=g11064.t1.exon4;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 11957 12149 . - 0 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 11582 11759 . - . ID=g11064.t1.exon5;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 11582 11759 . - 2 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 10428 11147 . - . ID=g11064.t1.exon6;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 10428 11147 . - 1 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 9913 10137 . - . ID=g11064.t1.exon7;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 9913 10137 . - 1 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 9679 9739 . - . ID=g11064.t1.exon8;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 9679 9739 . - 1 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . exon 8741 9373 . - . ID=g11064.t1.exon9;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . CDS 9068 9373 . - 0 ID=cds.g11064.t1;Parent=g11064.t1 NODE_815_length_17363_cov_43.5134 . three_prime_UTR 8741 9067 . - . ID=g11064.t1.utr3p1;Parent=g11064.t1 #PROT g11064.t1 g11064 MSGYSASSAPLLDVVSIFDSLVVAGTGLTDLSFLPSLSKVGGNVIIMQNPSLLSIRGLAALSFIGGSLTITGTLPSLASIDGPAKLEDVRGSIVLDDLSGPVSLSGLALVRTVRGDVSIVDTSLTDIGDLALVYIGGVLRVRQNAVLRRLASAKSFTAAASGETIQYSEVEFSSNPNLCVPEELRKAIAVASTDSIQISDNAPANSSLCIASSVGFSKVTAGDPGAAADLSSSILTVLNRTDWQAGDSKLASDAASAVVGKMLEIVQVARSSGAAGDPSEPTILTEEVSSNILTSIDSVLDPTNLGVMKAAKASNSLADIVKELSFAITANAPCGTRGTFAASRLFMNNIKESPTNLSGNLTYVQQDGTLASFVVPDGLSSELSLGNCVAASFSVMTGNPFVTSSTASSLRPTSNVMTMTFDNVTVSGLSPSNSFTFTISILDSGAKALCGFWNDTLQSWETNGCATLSQEGSLVTCRCSHLTSFSILFDTSTGSSSGGTIPESEAKALSYLTYIGCSLSIVGCALTIITFVALPRLRTVPTLLVMNVCVTLIVVNLVFVAGIDRTADAAGCKTVAIILQFGLLSAFSWMGMMGFNAYQNMVKVKFASREKVALLWGEYAIGYGAPAAFVAICVIADAASKGGIEYGNDSRCWISSTGGLVGAFLVPIALVVCANIFVLGCVMKSMRAARHMRSSSMAGANRLQFLKDASVYGALLAVLGCTWIFGFLGLFHYGFWYPFVLFNSFQGVFIFSAFVLRARVYNAWKERLQMVSDFSASRASGVSGGTEMSSATYSRPASMMHSAPSSRPASMYEIDDNPRSRPILTATSSHSSSKFLRKGSQDSSDDS* # PASA_UPDATE: g6515.t1, single gene model update, valid-1, status:[pasa:asmbl_3077,status:12], valid-1 NODE_1945_length_8402_cov_35.6908 . gene 2241 7927 . - . ID=g6515;Name=g6515.t1 NODE_1945_length_8402_cov_35.6908 . mRNA 2241 7927 . - . ID=g6515.t1;Parent=g6515;Name=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 7700 7927 . - . ID=g6515.t1.exon1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 7700 7927 . - 0 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 7247 7335 . - . ID=g6515.t1.exon2;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 7247 7335 . - 0 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 6917 7094 . - . ID=g6515.t1.exon3;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 6917 7094 . - 1 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 6585 6738 . - . ID=g6515.t1.exon4;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 6585 6738 . - 0 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 6271 6423 . - . ID=g6515.t1.exon5;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 6271 6423 . - 2 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 5772 6084 . - . ID=g6515.t1.exon6;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 5772 6084 . - 2 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 4465 5600 . - . ID=g6515.t1.exon7;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 4465 5600 . - 1 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 3922 4088 . - . ID=g6515.t1.exon8;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 3922 4088 . - 2 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 3417 3668 . - . ID=g6515.t1.exon9;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 3417 3668 . - 0 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 2661 3024 . - . ID=g6515.t1.exon10;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 2661 3024 . - 0 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . exon 2241 2438 . - . ID=g6515.t1.exon11;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . CDS 2308 2438 . - 2 ID=cds.g6515.t1;Parent=g6515.t1 NODE_1945_length_8402_cov_35.6908 . three_prime_UTR 2241 2307 . - . ID=g6515.t1.utr3p1;Parent=g6515.t1 #PROT g6515.t1 g6515 MSASDEKGLELQETAAPAAAPAPAPTPAPTPAPAAVADAPREEHAAPVSGDKPQWAKMPIPEALAKLESTEAGLTEAEVQKRLAQFGPNSLPVTERNAFLLFLSFMWNPLSWAMEVAAIIAICLVDYPDFALICGLLLLNAVIGFFEEQSAGNAVAALMGQLAPQAKVKRDGEWKNLPAIDLVPGDIIRIRLGDVVPADVKLLDGDEVKIDQSSLTGESLPATKYAGSEAYSGSIVKQGEIEAVVHSTGVNTFFGQAANLIDQTESVGHLQMVLTQVGNFCLITIIIWVIIELAVQFGGRDNPCDTPQGGESGWCPTLSNILVLIVGGIPVAMPTVLSVTMAIGAMQLAKKDAIVTRLTAIEELAGMEILCSDKTGTLTLNQLSVDKNTLFPVHNYTAEEILINGALSARVENNEPIDVCVHNACADKDSLWTKHTLVHYTPFDPVNKRTIAKVKDNQTGAIFRTAKGAPQVILKMDSRKDELAAAVTAKIDEFANRGYRALGVARSDSGDVPLDQCEWRLVGLIPLFDPPRVDSGETIRRAKAMGVDVKMITGDQLAIAVETARQLGMSCDIHTTAFFNQQLPPGSLSIDELVEAADGFAEVFPEHKYDIVKRLQDRKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLLTPGLSVIIDAIIGSRKIFRRMKNYAIYSITMTVRIVFTFGLLTVIYDWYFPTIIIVILAILNDGTVMTIAKDRVKPNENPDAWKLNEIFIVAFALGIWLTLSTIILFEIAYRTSWFYDTFRLTSFQYIDITPNCAGNTWLPSYIKDLQSLYNVVDILKEGDPSDWSYIPVTSGAVYDSNFLAVVRPEYINDTTNFQYITVLWPASNPQSYQAITQYGNINTGIVCANGANTITGAYTCQQMAVCALFERRQEEIRGLIYIQVSVTGQATIFVTRAKRFSYMERPAYILLAAFALAQLIATLIGVYGFNGMGNERQSFRGCGWGYALVAWIWSIIWWIGLDFIKLFTQWALSGGFNRMYNRTTFVASINAGHPSGRHRGVRRKTHATANTKGVNP* # PASA_UPDATE: g6514.t1, single gene model update, valid-1, status:[pasa:asmbl_3078,status:12], valid-1 NODE_1945_length_8402_cov_35.6908 . gene 299 2078 . + . ID=g6514;Name=g6514.t1 NODE_1945_length_8402_cov_35.6908 . mRNA 299 2078 . + . ID=g6514.t1;Parent=g6514;Name=g6514.t1 NODE_1945_length_8402_cov_35.6908 . five_prime_UTR 299 299 . + . ID=g6514.t1.utr5p1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . exon 299 399 . + . ID=g6514.t1.exon1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . CDS 300 399 . + 0 ID=cds.g6514.t1;Parent=g6514.t1;5_prime_partial=true NODE_1945_length_8402_cov_35.6908 . exon 782 861 . + . ID=g6514.t1.exon2;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . CDS 782 861 . + 2 ID=cds.g6514.t1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . exon 1255 1502 . + . ID=g6514.t1.exon3;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . CDS 1255 1502 . + 0 ID=cds.g6514.t1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . exon 1623 1713 . + . ID=g6514.t1.exon4;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . CDS 1623 1713 . + 1 ID=cds.g6514.t1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . exon 1940 2078 . + . ID=g6514.t1.exon5;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . CDS 1940 2047 . + 0 ID=cds.g6514.t1;Parent=g6514.t1 NODE_1945_length_8402_cov_35.6908 . three_prime_UTR 2048 2078 . + . ID=g6514.t1.utr3p1;Parent=g6514.t1 #PROT g6514.t1 g6514 ITSKEGKDYLAAMAAAANYAWVNRASMTFLCRQAFAKQFKTTPEKLDMHVIYDVSHNIAKVEEHIVDGTRKTLLLHRKGATRAFAPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTDKGMTETFGSTCHGAGRAQSRNKSRRALDYQEVLDSLSQKGISIRVASPKLVMEEAPESYKDVTQVVDTCHIAGISKKCFKLRPIAVIKG* # ORIGINAL: g8001.t1 original gene structure, not modified by PASA NODE_5565_length_801_cov_797.023 AUGUSTUS gene 1 751 . - . ID=g8001;Name=g8001.t1 NODE_5565_length_801_cov_797.023 AUGUSTUS mRNA 1 751 . - . ID=g8001.t1;Parent=g8001;Name=g8001.t1 NODE_5565_length_801_cov_797.023 AUGUSTUS exon 1 751 . - . ID=g8001.t1.exon1;Parent=g8001.t1 NODE_5565_length_801_cov_797.023 AUGUSTUS CDS 1 751 . - 0 ID=cds.g8001.t1;Parent=g8001.t1 #PROT g8001.t1 g8001 MIFVLPEVSVGGINVNELLGLGTEVRIEPTAEGLQKAADGVVGRAKELAAQARAEAERRLEEAKQEAKARVRRLMSQTVEELKARANEMQTLVDGKRILLLGSVVDAVGSSFGVDSTMLNTGVAGLPDFGLFGVTDTEVEFGGAVARAADAANVSPPSGFGSLKKLGVTIVYGGGATKPWIVVGTKEKGIVIYQLGINLRLEREGDVTVKGPLKFSCRVSGGLSIGGFVFSAYIPINVPGEQMIFVLPEV # PASA_UPDATE: g6323.t1, single gene model update, valid-1, status:[pasa:asmbl_3640,status:12],[pasa:asmbl_3641,status:12], valid-1 NODE_2157_length_7480_cov_38.1115 . gene 75 6974 . - . ID=g6323;Name=g6323.t1 NODE_2157_length_7480_cov_38.1115 . mRNA 75 6974 . - . ID=g6323.t1;Parent=g6323;Name=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 6479 6974 . - . ID=g6323.t1.exon1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 6479 6974 . - 0 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 5332 6060 . - . ID=g6323.t1.exon2;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 5332 6060 . - 2 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 4928 5081 . - . ID=g6323.t1.exon3;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 4928 5081 . - 2 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 4538 4655 . - . ID=g6323.t1.exon4;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 4538 4655 . - 1 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 4115 4244 . - . ID=g6323.t1.exon5;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 4115 4244 . - 0 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 3683 3841 . - . ID=g6323.t1.exon6;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 3683 3841 . - 2 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 3215 3387 . - . ID=g6323.t1.exon7;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 3215 3387 . - 2 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 2822 2938 . - . ID=g6323.t1.exon8;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 2822 2938 . - 0 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 2147 2491 . - . ID=g6323.t1.exon9;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 2147 2491 . - 0 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 1641 1959 . - . ID=g6323.t1.exon10;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 1641 1959 . - 0 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 1228 1435 . - . ID=g6323.t1.exon11;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 1228 1435 . - 2 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 863 970 . - . ID=g6323.t1.exon12;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 863 970 . - 1 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 441 611 . - . ID=g6323.t1.exon13;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 441 611 . - 1 ID=cds.g6323.t1;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . exon 75 170 . - . ID=g6323.t1.exon14;Parent=g6323.t1 NODE_2157_length_7480_cov_38.1115 . CDS 75 170 . - 1 ID=cds.g6323.t1;Parent=g6323.t1;3_prime_partial=true #PROT g6323.t1 g6323 MIRDGTSLPQLDVTVMDSEGRRINDLVLAKTRVLKLRCNIKTGHGPDRCIPIDIPSKNHQIHEDMVVLPGPAISLDSLPAGLAFPVQAELVCSWEVQLVGMMAYRERREGDALLGYEIAGDSEMGVNFVKEFAAVEEHASKKSLQPMLVRELTLRSAPLPIQIYSGAAKSLQLVPANMFQHSLHPGKFKDSTDHGENGMLVVLDDKGRKFNLLPDEERNFTERRLFEGLLTVSVTGDSDSGRPPLNVPMEIVDGGVCMQLANVDPGVGYGAKGTFTFNVKRRNESGGTLAKSVASLAVPFTMISRSIRFHLPNGIVAEESVKNLCRLKLPRHEKLSGVEVRFVDDASGDALDETIGKKLKFEGAGSNKSDLAIQKGICKLPDILVDGAMTFKITYKGIAAELRITENEELATKCRFAVLDIRVGVPVSVTVQFMDRFDRVVPPSKVDLTQWTAKVSLDLSDFPNATLEVADGATANTTVPVLLSGSCTKDSLVIPDVFKLSGKIPDSGRSAKSVKYEFTASLTRPGVEQAPLLWNGKAPVFAGPLFRFAPSKGGPVVVAENRDVIPDFEVHAVDEYGNKLRKEVLADTAVQNVTFGLPKSLQSGMVTLEPASHKVDRDLTCLNISKMRICVPALSDPEGMPLELVTTLLCGTKTIAVASPFRILVKPSTKPALIELMDCDGTIIINSLPFFEVRVLDDAMRPVADTAIVVQLAISNVSRRQVTETGVLSDSARGVYRFDLAQVLTLVQKPALYSAKVRVWAGNVKRDAAVERSINVVRHPGPPARMCINPNKSVGRKATPDATPVKDIKLWLEDAVGNRLVPPEGLFLNLGVRKECVESVAVTITIHKPNGETFKLPSFTANTDGHVAVPWVDFGHLDLELFPTIFSKSIFFEGFSVCNGVHLTASLQIDTDRDVTAIAAERQRQQVCLIPPRLLNTTSAKDKEAAERKADQADARQNEISERAAELKQLEAELNDVRKTMAIIDREKAQLNSKRANKGRSTDAINADITRVESDISEMNTTSARLPRQQISPVERTLVEAAEKGFFKFHGFLRDLGHVNHVDNRVSERISQHVGAKLSAVYVESQDDADYVRKHFSTFTVITRQSV # ORIGINAL: g8117.t1 original gene structure, not modified by PASA NODE_2067_length_7862_cov_87.8169 AUGUSTUS gene 3836 7822 . - . ID=g8117;Name=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS mRNA 3836 7822 . - . ID=g8117.t1;Parent=g8117;Name=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 7664 7822 . - . ID=g8117.t1.exon1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 7664 7822 . - 0 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 7249 7352 . - . ID=g8117.t1.exon2;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 7249 7352 . - 0 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 6433 6585 . - . ID=g8117.t1.exon3;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 6433 6585 . - 1 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 6040 6129 . - . ID=g8117.t1.exon4;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 6040 6129 . - 1 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 5583 5678 . - . ID=g8117.t1.exon5;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 5583 5678 . - 1 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 5041 5103 . - . ID=g8117.t1.exon6;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 5041 5103 . - 1 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 4512 4660 . - . ID=g8117.t1.exon7;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 4512 4660 . - 1 ID=cds.g8117.t1;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS exon 3836 3984 . - . ID=g8117.t1.exon8;Parent=g8117.t1 NODE_2067_length_7862_cov_87.8169 AUGUSTUS CDS 3836 3984 . - 2 ID=cds.g8117.t1;Parent=g8117.t1 #PROT g8117.t1 g8117 MDAIIERSFMFALKSTVTDKDLPLLASNLYSEHMLAQCKLHFLMDIKKSKYKKLSKLTKEMEKRKLIKVKEFSKGIESIVSIDRAHPDLVAFVIPQKVEIAKEKKTAPTKSDAGPSQPLTVRDLYRPKQGVAFLFANLPKDTYLATTDMRDAINAYITSHDLVVPTDKKFITLDPLLTDALYDKGERGSVTKIARDELSKRVMDRMQPFYVITFSNGEEELRKGVLKSINVSVETRSGKRLVTLITNVEIFRIDPGDVAKEMQKLAAASTTVTESPNKSEGQIVQVQGDAAKEAVQLLTTRFHVPRKYIDAPDAKPPKKK* # PASA_UPDATE: g8116.t1, single gene model update, valid-1, status:[pasa:asmbl_3407,status:3], valid-1 NODE_2067_length_7862_cov_87.8169 . gene 275 4308 . + . ID=g8116;Name=g8116.t1 NODE_2067_length_7862_cov_87.8169 . mRNA 275 4308 . + . ID=g8116.t1;Parent=g8116;Name=g8116.t1 NODE_2067_length_7862_cov_87.8169 . five_prime_UTR 275 605 . + . ID=g8116.t1.utr5p1;Parent=g8116.t1 NODE_2067_length_7862_cov_87.8169 . exon 275 4308 . + . ID=g8116.t1.exon1;Parent=g8116.t1 NODE_2067_length_7862_cov_87.8169 . CDS 606 3560 . + 0 ID=cds.g8116.t1;Parent=g8116.t1 NODE_2067_length_7862_cov_87.8169 . three_prime_UTR 3561 4308 . + . ID=g8116.t1.utr3p1;Parent=g8116.t1 #PROT g8116.t1 g8116 MADPPGSISPAASNPRLRIANGTAVWLDDLESGSRPSVADFGSQAVGPSVSNLQRLSSSTGGSKFLEGSGARESVKRRRRPSEMLKNLLSTATKPLRRGSNLIDVVEDEGGSTLVRNEQHGSMWTKLRESLAPRLSLAASFTSEEMRLAAVDVDQDKLRALVNVTPLTAICTRILDSPITTAVMTVATIWVLFASDLTQAALPKSSDYGMNLVSVLVFFLFCIEFAMMCIANGRSYIGRLFFFLDMLAILSLLPEVVHFFGSDVISKALSNLSVARAGRAARASSRIARMLRVVRIVRLWRKDVAPTGSAAKLQSEDDDILRPTKVGTKLQASTTNKWVVGLILLLLLFNFTEDSSDTSTTALQNGIDELSVMNNGSTEALAMSAMYVGMFTDILYLHTPWAVQAFYGTPAEIEHHFRDTEFFEVNSANGLAFAYYSTRASAKFQAILSIILTISLIVLLVVGNALFQKDLDTLVIGPISKMTAIITGLAENPLMNVATYGNQSENQYETGLLMTMISKLGYLLQIAFGTAGAKIISENMSTDGDLHPMVPGRKMSAIFGFCDIRTFTDVTEHLKEDVMLFVNKIADVVHTAVVSNNGAPNKNIGDAFLLVWKPSDNESKPDIVGSRSVTRPPSGRVNGAPHVTTGFKGPGKTPRHSNDILRSDVHKVTELAGGELGLTISTDNGNGDIATIVVSADDDAVNKNDANNNVSLPGQMPGSGVGVGAGGGGLSTGDGVGPVASSMDVSSALHKHDNTLAGHEQSVTLLSALSVGTLKSFLETQEGLVKSDVLGGMVERLQKVMPNYRLKMGFGFHVGWAIEGPIGSNYKVDASYLSPHVNITARLESATKQYGVDNLFSGQFFSIIPKEYRHLFLKLDLVMLKGSRTPVYLFTLNPRLMAATEKDYFSPAVLDCKSDAVADTKRHYEAAVHFYMDGHWRQAREMLAKYDTPTDSLHVAARVLLDFMQETNFVPPRDWVGVRALTDK* # ORIGINAL: g5763.t1 original gene structure, not modified by PASA NODE_3759_length_2812_cov_33.3701 AUGUSTUS gene 199 764 . + . ID=g5763;Name=g5763.t1 NODE_3759_length_2812_cov_33.3701 AUGUSTUS mRNA 199 764 . + . ID=g5763.t1;Parent=g5763;Name=g5763.t1 NODE_3759_length_2812_cov_33.3701 AUGUSTUS exon 199 339 . + . ID=g5763.t1.exon1;Parent=g5763.t1 NODE_3759_length_2812_cov_33.3701 AUGUSTUS CDS 199 339 . + 1 ID=cds.g5763.t1;Parent=g5763.t1 NODE_3759_length_2812_cov_33.3701 AUGUSTUS exon 686 764 . + . ID=g5763.t1.exon2;Parent=g5763.t1 NODE_3759_length_2812_cov_33.3701 AUGUSTUS CDS 686 764 . + 1 ID=cds.g5763.t1;Parent=g5763.t1 #PROT g5763.t1 g5763 NLGSLALLSAFPDGIFDKLTSLSKLSLANTPATLPKRPFALDSLRILDMTSGDLSAGIPADLFSGATGLEEL* # ORIGINAL: g2307.t1 original gene structure, not modified by PASA NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS gene 9319 9978 . + . ID=g2307;Name=g2307.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS mRNA 9319 9978 . + . ID=g2307.t1;Parent=g2307;Name=g2307.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 9319 9978 . + . ID=g2307.t1.exon1;Parent=g2307.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 9319 9978 . + 0 ID=cds.g2307.t1;Parent=g2307.t1 #PROT g2307.t1 g2307 MYTSCLTSIDEPLPPNLEELDLAYNMIRTFDSVLPPTLKRLKIEGNFLMTFPPGIDNCEVYTTYDNHTPESLFVRKSNERNRDHINLLSKQPKRPCGESHLGDVPDREALIANVRRELTVLNPLQGAYVARALELWTDHVGTSMILLRRVAKCWHDLQMVSRRDLYFDEFIRCVVEAMGRGFDARVRAFGSMRLDIELRVGDVDYDVEYLSDSDIDFFF* # ORIGINAL: g2310.t1 original gene structure, not modified by PASA NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS gene 18097 19267 . + . ID=g2310;Name=g2310.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS mRNA 18097 19267 . + . ID=g2310.t1;Parent=g2310;Name=g2310.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 18097 18403 . + . ID=g2310.t1.exon1;Parent=g2310.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 18097 18403 . + 0 ID=cds.g2310.t1;Parent=g2310.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 18627 19267 . + . ID=g2310.t1.exon2;Parent=g2310.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 18627 19267 . + 2 ID=cds.g2310.t1;Parent=g2310.t1 #PROT g2310.t1 g2310 MRRMATTRSMWPHKCCADLTVYATVSFLLGAYFALSAVPSCEAANGVSIVSQENATTLLLSGVSKKLILDPGLNGSVLISGTDFAELLRRVFVLESKVASIQGQQSACGPPHTNYGFVVFNGFKNPDGPAATDMRNPFVFWNISYAERFVDRGSCNESLRSNCYCPSAYRRFEPNSFVVTDVYEDLNGSSFILFSASAAGIDPVTMRMIQPALISGVCSACYGAQFASGWSARDYDGDMEAEVNCATVDASPYSGSMMHFYQCYVYSLTLDADTPRTDSSWGPHVLTDKSDWPGGATDGTRSTRVNRITRYIRPK* # ORIGINAL: g2308.t1 original gene structure, not modified by PASA NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS gene 11926 12913 . - . ID=g2308;Name=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS mRNA 11926 12913 . - . ID=g2308.t1;Parent=g2308;Name=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 12637 12913 . - . ID=g2308.t1.exon1;Parent=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 12637 12913 . - 0 ID=cds.g2308.t1;Parent=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 12183 12557 . - . ID=g2308.t1.exon2;Parent=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 12183 12557 . - 2 ID=cds.g2308.t1;Parent=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 11926 12002 . - . ID=g2308.t1.exon3;Parent=g2308.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 11926 12002 . - 2 ID=cds.g2308.t1;Parent=g2308.t1 #PROT g2308.t1 g2308 MASQEMGFACMGLLMLCAVLQCASNTTAEPAALSVASTNESATVRVSGTGKSLVLDAGEKGTIWFNSSIDGTAVKALLKRIDDLEKKVELLQAISPCGPEHPAYGFVVYNSVKNTNPAATGLANPLEFWNITYAQRFHNRGDCGTLNTSCYCPSAYVLYPSVRYRSVVVTDVVEDLAGKTFVLFNATSEGIDPTTMRMIRPAFLGGEVVFYDYQFAAVLVGAAFNGNSVSRANRITRYIKLQ* # ORIGINAL: g2309.t1 original gene structure, not modified by PASA NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS gene 14422 17864 . - . ID=g2309;Name=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS mRNA 14422 17864 . - . ID=g2309.t1;Parent=g2309;Name=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 17577 17864 . - . ID=g2309.t1.exon1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 17577 17864 . - 0 ID=cds.g2309.t1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 15791 17422 . - . ID=g2309.t1.exon2;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 15791 17422 . - 0 ID=cds.g2309.t1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 15367 15679 . - . ID=g2309.t1.exon3;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 15367 15679 . - 0 ID=cds.g2309.t1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 15082 15278 . - . ID=g2309.t1.exon4;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 15082 15278 . - 2 ID=cds.g2309.t1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 14829 14870 . - . ID=g2309.t1.exon5;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 14829 14870 . - 0 ID=cds.g2309.t1;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS exon 14422 14733 . - . ID=g2309.t1.exon6;Parent=g2309.t1 NODE_639_length_19805_cov_34.2873_potentialcontaminant AUGUSTUS CDS 14422 14733 . - 0 ID=cds.g2309.t1;Parent=g2309.t1 #PROT g2309.t1 g2309 MNSEKYTGHLVQFNLHIVCTNTCYGNGSSMVPYTSRLAVVIALLAFAAVGSGMKLQYNVTTGMTDWAAASWWKVNVSQPYKGLPCSGDPVSITGPSASVKVFGRARSGTVVIELGELVIVEGGSLQIFPDADEHTDATLCSVNTTIPTPPTRVANATDGADLKAFQYNDSVSFQVRRDSFRDANGEVLKFSLADVAVNGQPASAQSPWWSFNPQTLLFQGVPRAGDALGLYRVRVNAANTVGSVAGDLSFALYRTLACPCQHGGACTSYNAACDCKVAAPGFTGPACSDECAPSSFSWGSNCGTNCTCSRAGSNRCVASTGDCMCKSGWENGSGAPDCGQSKAPLLSYVNIDYLKATRVDLLVEVTQNYGHEINRIEGAAVSADGRTIDALQPSRLAQSSPSGGQYVVSFWNLEPKTPYSFKMRAVNAYGRASSNVSQSVTTVTVTKPPAPTILSISATYSYVTLAFNASNENGKVKSFLIVRDPGNAQLFDVADTVGRQALVRITDMAFAFNDTSVSSSTPYTYTVYARNTGVENDLQSNASDARSVQTNDAPPSSANAQPGSGGSSVVGPVVGVLFGVGGVAGLAFGAFWYVRRQKKRKAAAVAQSELALIETVSARPEITELELHESLLKLLSKLGEGEFGMVHKGLATIQDEKIEVAVKTLKLNVNLPPEETLSARSAFMGEIDLMRSVPPHPNVVAMLAVVTLSTPNRIVLEFCDLGDLRTYLLKNSESLEDHQLLKYARDAASGMAHLEQLRIVHRDLAGRNCMLKSAGSSGAILKIGDFGLSRSVSDNDYYRVRTRGKLPVKWASDVWSFGVVMWEMWSRGAKPYPGLENHRVMEHIRSGKRLDLPENCPPAIYKIMEQCWKKHPETRPKFADLFRNLSAIAAGGKDWRASTASMGDAVPGENYAEIDIASNPTYSETAA* # ORIGINAL: g678.t1 original gene structure, not modified by PASA NODE_6544_length_549_cov_401.359 AUGUSTUS gene 1 549 . - . ID=g678;Name=g678.t1 NODE_6544_length_549_cov_401.359 AUGUSTUS mRNA 1 549 . - . ID=g678.t1;Parent=g678;Name=g678.t1 NODE_6544_length_549_cov_401.359 AUGUSTUS exon 1 549 . - . ID=g678.t1.exon1;Parent=g678.t1 NODE_6544_length_549_cov_401.359 AUGUSTUS CDS 1 549 . - 0 ID=cds.g678.t1;Parent=g678.t1 #PROT g678.t1 g678 TPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSVSQRVSEEDVDGKGSVVALLIVRTGGAFTEQTILWTTEGPAGQFSPTSGSVSFGDGIVEMTVLISVLADDVPELDQTVAFGLTEVVGGGRIDENGVAGAFTILENDDAR # PASA_UPDATE: g3620.t1, single gene model update, valid-1, status:[pasa:asmbl_3869,status:12], valid-1 NODE_2242_length_7102_cov_40.7911 . gene 5292 6561 . + . ID=g3620;Name=g3620.t1 NODE_2242_length_7102_cov_40.7911 . mRNA 5292 6561 . + . ID=g3620.t1;Parent=g3620;Name=g3620.t1 NODE_2242_length_7102_cov_40.7911 . five_prime_UTR 5292 5359 . + . ID=g3620.t1.utr5p1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . exon 5292 5395 . + . ID=g3620.t1.exon1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . CDS 5360 5395 . + 0 ID=cds.g3620.t1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . exon 5490 5576 . + . ID=g3620.t1.exon2;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . CDS 5490 5576 . + 0 ID=cds.g3620.t1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . exon 5769 5894 . + . ID=g3620.t1.exon3;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . CDS 5769 5894 . + 0 ID=cds.g3620.t1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . exon 6061 6157 . + . ID=g3620.t1.exon4;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . CDS 6061 6157 . + 0 ID=cds.g3620.t1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . exon 6315 6561 . + . ID=g3620.t1.exon5;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . CDS 6315 6415 . + 2 ID=cds.g3620.t1;Parent=g3620.t1 NODE_2242_length_7102_cov_40.7911 . three_prime_UTR 6416 6561 . + . ID=g3620.t1.utr3p1;Parent=g3620.t1 #PROT g3620.t1 g3620 MAAIIISKQFAWPVLSSVAIGVQVILQGFAVGGLRRKYKLDYPDMGTGRFSQKLTDEEWIKFNNYQRVHYNYVEGVTTAITLNVAAGIFYPEYAAIAGLTYIVGREVYAYGYRKGGSKDRVYGAVILETALVAMLGLAITGAVKALLA* # PASA_UPDATE: g3619.t1, single gene model update, valid-1, status:[pasa:asmbl_3868,status:3], valid-1 NODE_2242_length_7102_cov_40.7911 . gene 255 4919 . + . ID=g3619;Name=g3619.t1 NODE_2242_length_7102_cov_40.7911 . mRNA 255 4919 . + . ID=g3619.t1;Parent=g3619;Name=g3619.t1 NODE_2242_length_7102_cov_40.7911 . five_prime_UTR 255 289 . + . ID=g3619.t1.utr5p1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . five_prime_UTR 502 527 . + . ID=g3619.t1.utr5p2;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 255 289 . + . ID=g3619.t1.exon1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 502 573 . + . ID=g3619.t1.exon2;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 528 573 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 983 1115 . + . ID=g3619.t1.exon3;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 983 1115 . + 2 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 1245 1329 . + . ID=g3619.t1.exon4;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 1245 1329 . + 1 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 1573 1660 . + . ID=g3619.t1.exon5;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 1573 1660 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 1851 1972 . + . ID=g3619.t1.exon6;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 1851 1972 . + 2 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 2277 2435 . + . ID=g3619.t1.exon7;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 2277 2435 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 2663 2750 . + . ID=g3619.t1.exon8;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 2663 2750 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 3022 3146 . + . ID=g3619.t1.exon9;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 3022 3146 . + 2 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 3298 3458 . + . ID=g3619.t1.exon10;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 3298 3458 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 3706 3850 . + . ID=g3619.t1.exon11;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 3706 3850 . + 1 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 4070 4125 . + . ID=g3619.t1.exon12;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 4070 4125 . + 0 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . exon 4415 4919 . + . ID=g3619.t1.exon13;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . CDS 4415 4547 . + 1 ID=cds.g3619.t1;Parent=g3619.t1 NODE_2242_length_7102_cov_40.7911 . three_prime_UTR 4548 4919 . + . ID=g3619.t1.utr3p1;Parent=g3619.t1 #PROT g3619.t1 g3619 MASRILSRGYATASTAAKSGRRNIVLVEGVRTPYQVSGTNFEDQMPHDLLRMAFQGLLNRTNIAHSEVDHIIGGTVIQEVKTSNVTREAALSCGFSDRVPAHTVTMACISSNQAITTGMGLIASGNADAIIAGGTESMSDVPIRFSRALRKRMLASRKIKSPAGYLGLLSGLKMSDLSPELPAVAEFSTNETMGHSADRLAIAFGITRKESDDFALRSHVNASKATKDKLLSDVLPIYLANKGKHVTEDNGIRVSTPEQMAKLNAAFIKPYGTVTAANASFLTDGASACLIMSEEKALALGYKPKAYLREFVYVAQDPKDQLLLGPAYATPRVLEKAGLTLKDIDVFEIHEAFAGQVLANLQAMNSDVFGQKHMGRSGKVGEIPMDKLNTWGGSLSLGHPFGSTGVRLVTTCANRLKHENGRFAVLSACAAGGLAVAQLIERYPGN* # PASA_UPDATE: g2266.t1, single gene model update, valid-1, status:[pasa:asmbl_5784,status:12], valid-1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . gene 152 3803 . - . ID=g2266;Name=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . mRNA 152 3803 . - . ID=g2266.t1;Parent=g2266;Name=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . five_prime_UTR 3802 3803 . - . ID=g2266.t1.utr5p1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 3516 3803 . - . ID=g2266.t1.exon1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 3516 3801 . - 0 ID=cds.g2266.t1;Parent=g2266.t1;5_prime_partial=true NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 3002 3292 . - . ID=g2266.t1.exon2;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 3002 3292 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 2600 2887 . - . ID=g2266.t1.exon3;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 2600 2887 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 2101 2394 . - . ID=g2266.t1.exon4;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 2101 2394 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 1638 1922 . - . ID=g2266.t1.exon5;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 1638 1922 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 1129 1416 . - . ID=g2266.t1.exon6;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 1129 1416 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 607 885 . - . ID=g2266.t1.exon7;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 607 885 . - 2 ID=cds.g2266.t1;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . exon 152 439 . - . ID=g2266.t1.exon8;Parent=g2266.t1 NODE_3252_length_3912_cov_47.5658_potentialcontaminant . CDS 152 439 . - 2 ID=cds.g2266.t1;Parent=g2266.t1;3_prime_partial=true #PROT g2266.t1 g2266 VNEAPTDITLSASTIAENASSGTVIGTLAALGDPDAGDTVAFTIVGGSTDFQIVGASLKSLVKFDFEARATYSVLVRATDAGGLPVEKTFSISITDVNEAPTGITLSKTAIAENNALNAVVGVLTQVGDPDAGESFTFTLTSDPTLSFGIVGSNLVAIKTFNFESASTFRVGITLKDKGNLAVAVDFDISVTDVNEAPTAIALSPASISEISAIGTAVGALTATDEDARESFAFSIVTNPSNAFTLNGNNLITATLLDTTVAASYNVRIRVLDSASNPFEITIKVTVNAVNQSPTGMTLTGNTVAENTPAATLVGTLSSQGNFAPDSTMSYTIKTNPSGLFSISSNRLVTASPPDYEAQSSYSVTIVGTESKRGATIERNFTVSITDVNEAPTNIQLSSTAIAENLAINSLVGILTTTDPDVGNSFTYTLSDASGAFTIVDNTLRTTRQLDFETKNSYPVSITTADQLGSTFVKSFTITVTDVNEEPQDISLDNRVISENTAAATVIGRFAALGDPDASETFTFTLETANPAFTIVTNELRAVAPFDFETKNSYSVAVRATDRGGLFVTKIFAITITDVNEKPTQITLSSRAVDENFAGTVGSLIVSDPDQTDTVTFTLTDASGAFDIRSGFLVTKSGLDFESKSSYPITIRSTDKGALFIDVSFTITVNDINEVPTDLTISASTIAENLDAGATVGTFTTADPDTGSTFQYSLSANPGNAFAVSGNKLVTNARLDFEARSTYIVTVLSMDNGRLSISRDFTIRVQ # ORIGINAL: g11703.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 21639 24129 . - . ID=g11703;Name=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 21639 24129 . - . ID=g11703.t1;Parent=g11703;Name=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 23927 24129 . - . ID=g11703.t1.exon1;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 23927 24129 . - 0 ID=cds.g11703.t1;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 23590 23692 . - . ID=g11703.t1.exon2;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 23590 23692 . - 1 ID=cds.g11703.t1;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 23221 23380 . - . ID=g11703.t1.exon3;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 23221 23380 . - 0 ID=cds.g11703.t1;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 22537 22827 . - . ID=g11703.t1.exon4;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 22537 22827 . - 2 ID=cds.g11703.t1;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 21639 22120 . - . ID=g11703.t1.exon5;Parent=g11703.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 21639 22120 . - 2 ID=cds.g11703.t1;Parent=g11703.t1 #PROT g11703.t1 g11703 MPHTSTQQERAIGLRQTAASLTQITCVPAMAASLALNAIVSGTIAGMVATSVTVAIEKWGGVIGGILGATPTTIIPASIGLAIESESMEHFVASMYTVPFGMLLNSFYLMMWRRFPRYLSTERPHRLAKMIALTSVAWLCMALGYIFGMVALLDTGFKYQGVLAVCALIGQLSIGAYSVLYRPLPAPAGKNKVNKTTLLLRASLGVCVVSSAVCLAKVNEVFAGLAASFPAIFMTSMVSLWISQGETCALGAAGPLVFGSSTVSFYAIAIGFLRPKIAHSVDSFAGALAISVVVSYIASVSCISIPIFLILRHRKAVDAQRGGYRKFSGVDEVHVEMAEQHGGPVEKNGGPSATNAHALLREGTHTMGIVDGSSVHAEVEEEHGKGATPGQSRRVRRKGADTEALLAESGDV* # ORIGINAL: g11698.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 1110 6044 . + . ID=g11698;Name=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 1110 6044 . + . ID=g11698.t1;Parent=g11698;Name=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 1110 1558 . + . ID=g11698.t1.exon1;Parent=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 1110 1558 . + 0 ID=cds.g11698.t1;Parent=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 1796 2929 . + . ID=g11698.t1.exon2;Parent=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 1796 2929 . + 1 ID=cds.g11698.t1;Parent=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 3116 6044 . + . ID=g11698.t1.exon3;Parent=g11698.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 3116 6044 . + 1 ID=cds.g11698.t1;Parent=g11698.t1 #PROT g11698.t1 g11698 MDSQSSVATAVAMDSGDDDIDGEEIVYLPANLLQFSVSPAREADPLNTSGAGASQWNGSILPSSNAHISGTTTNSMMCTVPDPSDVDVQWATLSEALLPELEEGLGEFDPSFFGDDPLQSLGESPLPFGLAQPAPQFAPVTIGDDDAIKGCSIAVQYDPQASKFIACPAIAADITVSVDGYTRESALKHRTNKYYSPKLTLNFEGVTDFGKCLADPSILRVRLSLVNSACAVSNHWLKPTSETERAMPHHQLINDPTASTPGRAGVVFVSKSRSHSFGGVKTEMAQESTGIPAKTLREAFYFELSVAVCETDAVTAADSERYSPIIRIGPFKLTTDSNQRKAADSNTQKATNSNKRKAASPVRESSTRRPPPQPSLCPEKMQALDLIEKLEDIQNNLALIAKVREIMADTRMTLADAPQQDCETSLPGASMSSVREVEDDDVVDGHCDIDSGSSVESDDGRDKCRKVPQSAVGDVESTVDFGGGDGTAHSLMEASQSQSDEDTLEQILPMTSKLLELLRDIKEVDGQRDDTTSEERARILQSLLELLREKRGCVSNRRTRIVFLAVDADSTNSIGADKEYEAIRESFPDCIVDRYNTTPVDLVSALVQSREAQRDRNVDIILHLCVHGNSNGIFLARGIQSRAQSVSKGKTGTSPTSSAASISSASSVQSVSISSQRIASAIGDVGRHLRFVVINSCCSRAISREIARTGGVSVISPHRDLVGNAEAIELTRQLYAAIAAGNKPSDAVAIVNTMMKINAAPNDPTAPISYRFIQAGEAAEVVLRAYQAELVRKCFSDDGNYVNTIITAPTNSGKTTVAAKVCLKVPRPGARVFICNTTTLADQIAARLPDILEGLCVQDNTSPPSQVELVVGSGAGSDDGPSAVEKLSLHIAAGAYVAVTADILKQAIERGVVSMRDIGVLVFDECNLCHKEYSYNVIMKDGYRPAFVASDGTATDAPHILGLSATPFVKDKGTYSENLERLCANLCCGNVASVVEHQQGLVDAIGKGSTVSVWTASLRVRDTELHRIIQGFLADTEKWVTDCTSQGTDRPGIPPPGESASLSLDNACVPRLRGRAAKVKDTSIRAAKVTGLRLMPAAHALLCIADVLDVLDTIGAGAAIQEFDAYWRKENGSTEKETERFVEAVARRYADRVHQLPDADREHVSPLVERVASLLHTKLIPGAGKAIVMCESRACCTALHRILLSRFTELKPVLLLGSGGSDGLSEAQQRRAYVEFRSEDSRILVATKIANYGLDFPGCTLGVAVSLGTNGVEHVQAKGRVRSERGEFCIVDYAGAAAEKAEEAERSHSAQTKAISDVAEGGDAARRIAAAAGLARQRKMHEERQNERRKKEEQAARNAEQRSRLRREDYDVVCSRCHRVLCSASALHLVGKMHLSVGRNDHTLSGSVSYRGLVGKLKEYDGIAPTGRMAVHRTADCNEHIGWELTSSKWQDGPWLNLNKDKYFVRLRPLSPHDHGESLRPETITSKEIKAKFDIPYFPAESS* # ORIGINAL: g11704.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 24924 26449 . - . ID=g11704;Name=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 24924 26449 . - . ID=g11704.t1;Parent=g11704;Name=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 26186 26449 . - . ID=g11704.t1.exon1;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 26186 26449 . - 0 ID=cds.g11704.t1;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 25790 25903 . - . ID=g11704.t1.exon2;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 25790 25903 . - 0 ID=cds.g11704.t1;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 25342 25588 . - . ID=g11704.t1.exon3;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 25342 25588 . - 0 ID=cds.g11704.t1;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 24924 25114 . - . ID=g11704.t1.exon4;Parent=g11704.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 24924 25114 . - 2 ID=cds.g11704.t1;Parent=g11704.t1 #PROT g11704.t1 g11704 MQLNGNARHQGVGLGLYLCSMLVETMGGRIGFDSVYGHGSTFWFDLPFERAEIEVESMHGCDCTFDNVTADDVQVDIPSPDATSGHAENGGTVYMRDERCHSSHNRLPEIGDSDGTEQIPLQDISRTRRLSVSADVQMPLQANAHAPRHLVCDDILMNRVVLKRYIQSLYPSIVVDEAENGRVAVHLAEERDYDIIWMDVQMPVMDGIEATKNIRQMRKCDDVAVVGITGDVTEEAVAYYRAVGMQDVRSKPVMRDTIADAIAKWQRSPTA* # PASA_UPDATE: g11701.t1, single gene model update, valid-1, status:[pasa:asmbl_5956,status:12], valid-1 NODE_337_length_26591_cov_42.3604 . gene 12442 18309 . - . ID=g11701;Name=g11701.t1 NODE_337_length_26591_cov_42.3604 . mRNA 12442 18309 . - . ID=g11701.t1;Parent=g11701;Name=g11701.t1 NODE_337_length_26591_cov_42.3604 . exon 15973 18309 . - . ID=g11701.t1.exon1;Parent=g11701.t1 NODE_337_length_26591_cov_42.3604 . CDS 15973 18309 . - 0 ID=cds.g11701.t1;Parent=g11701.t1 NODE_337_length_26591_cov_42.3604 . exon 15604 15701 . - . ID=g11701.t1.exon2;Parent=g11701.t1 NODE_337_length_26591_cov_42.3604 . CDS 15604 15701 . - 0 ID=cds.g11701.t1;Parent=g11701.t1 NODE_337_length_26591_cov_42.3604 . exon 12442 15247 . - . ID=g11701.t1.exon3;Parent=g11701.t1 NODE_337_length_26591_cov_42.3604 . CDS 12442 15247 . - 1 ID=cds.g11701.t1;Parent=g11701.t1 #PROT g11701.t1 g11701 MAALTNISRVALVAVIAVCLTFPTATAFNTSTSTDDDSRSTRDVNRIVQLGKHHDHEALLTALKALNSLYPDITRLVLLGTSVEGREIYAIEITDGPGIVEAGEPHFKYVGNMHGNEVIGREMLLLFIEYLCMNFGKNERITKLIRETDIYIVPTMNPDGYARSFVGDCYGIQGRSNAYGVDLNRNFPDQFTSVGSQMHETKVMIDFILSLPFVLSANLHGGSLVASYPFDDTINNVDGYSATPDDDIFRRLALAYAMNHGQMYTHGGCVEYNDHFPEGITNGAEWYSLRGSMQDFNYIHSNCFEITVELGCCKFPAADDLVGKWNDNVNALLGYLEEVHRGVKGFVRTDAGDPLPGAKIEVVGRNHAVVSASHGDYWRLLVPGDYTLRFSAPGYVNVSRQVTVVDGPATILDVELEPTSLLKHHDNAAMHDFLEDSEGHFGDVMALHGLGASAKGTPLWAMQITRSPELFAVGRPRVLLVGNVHGHDAVTREILLQLIHHIGVEYERNETIRSIVDRTDLYIVPSLNPDGYEKATLGQCAATDASYGNGNGVNLNEDYPAWQGGGSTAAEPQPETKNLLAFLADRPSVIGATLFAGAVVATYPYDEYVQTNDTARDQKTNAPGYPQPTPEDSLMRSLASTYARHHPVMPAGTEACGGMSAYTGGVVNGQGFLHKAVGGNGVTMQDHFYEAGSAHIAVHIGCCRFPQVEGLDDVWKANLEPLLWYILRVHGPSFKGRIVGTDTGKRLPRAVIRIDGVDHDTYADENGFYWRVVEKGTYKVTASAEGYEALTLSVTVDDGPITLNFDLEPAYQWVVHNRWGLNDLISEIAERYQNISALWTMGHTVENENLWALEITGRPGVTELLEPKVVLMANVHGDESGGRELLLALARYLTHEYARNETIRNIVDTTYIVLVPSVNPDGFMDADGDRCNETYSRTNFMDVDLNTDFGNYNISNTPTYGVEIETHAVINLIDDTHFVVGAFLEGGYLGVRYPYDEPPVPVDGTDPPKFKENPTPDNAVLRSMANRYASIHPTMSHGGSLCLKEASPHEYPPFATGIANGATVRPFKGGPLDFAYRHSPSIFPIAIGVTCCTFVSDSQIRELWEEHRDALLDLIMQAHRGFKGIVMSANTSTPIHMASVWIAGNERPVLSSLLGDFWRIVDPGTYEVTVGAKGFHNKTQTVVVVAGAPASRIDFSLVALPPMPSEPITSSSVASMTSSATTPSATVEPDIPPYEFKYHTTTELNAASDALVAKYPHIVRTTDIGRSASGLPLRVLRVSDSLSIAEVGEPRVRLVAGAHGGEAPGRELLLLFAQYLAFNYGKNDTITRLVDSTDLHLLPALNPDGVGASAASVGDCFGQAGGTNSNDIEIFSDFPDFSAVDAAAVAKGDHIADAHYTMRQPETRAFMEWTAKTGGFVLSLELRSGSLGVSYPLDALYGGSVTPAADAELLHSLASSYASRNPMISAGTEGKAACVHVPKYGADGTSQGASRLPLKGSLGDYAYLNGTALSVTVGVDCCSFPYVSDLKALWDANRDALISFVLSAQRGLRGTVLGPNKEPVIGARVDVALASSGVSAGRPVFTDARGSFHRIVPEGTYAITISATGYDSHVATDAIVGGGSVVATEVPVFLDIPAPKKELAPASKAGIVFGVAAAVGLLALAFILYRAYRRYSGFRPLVNELDDDDLDGVLEGEGDEGDGKTSAPARARHGTNGAVAMGTLKAASSSNADVRHTSAIDMRGSASSFV* # ORIGINAL: g11702.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 18920 20141 . + . ID=g11702;Name=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 18920 20141 . + . ID=g11702.t1;Parent=g11702;Name=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 18920 19053 . + . ID=g11702.t1.exon1;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 18920 19053 . + 0 ID=cds.g11702.t1;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 19222 19321 . + . ID=g11702.t1.exon2;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 19222 19321 . + 1 ID=cds.g11702.t1;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 19565 19633 . + . ID=g11702.t1.exon3;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 19565 19633 . + 0 ID=cds.g11702.t1;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 19923 20141 . + . ID=g11702.t1.exon4;Parent=g11702.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 19923 20141 . + 0 ID=cds.g11702.t1;Parent=g11702.t1 #PROT g11702.t1 g11702 MSCCKRSGGLSNRTPSQLSASLSTAASKVPATTKAAVVDALGRSIVSIPAGGFPADIGPMLVDLSASAQGFDEVIGAQDWRSLHVCGPGVIFSCYKAGPDHFVAVETTVSAAALRKMPETSQIDDAFLPILENVSMALHGTTTGTSIGPYTSKNNASAGDAGEKRDSQKHLTS* # PASA_UPDATE: g11699.t1, single gene model update, valid-1, status:[pasa:asmbl_5955,status:3], valid-1 NODE_337_length_26591_cov_42.3604 . gene 7492 9037 . + . ID=g11699;Name=g11699.t1 NODE_337_length_26591_cov_42.3604 . mRNA 7492 9037 . + . ID=g11699.t1;Parent=g11699;Name=g11699.t1 NODE_337_length_26591_cov_42.3604 . five_prime_UTR 7492 7816 . + . ID=g11699.t1.utr5p1;Parent=g11699.t1 NODE_337_length_26591_cov_42.3604 . exon 7492 9037 . + . ID=g11699.t1.exon1;Parent=g11699.t1 NODE_337_length_26591_cov_42.3604 . CDS 7817 8710 . + 0 ID=cds.g11699.t1;Parent=g11699.t1 NODE_337_length_26591_cov_42.3604 . three_prime_UTR 8711 9037 . + . ID=g11699.t1.utr3p1;Parent=g11699.t1 #PROT g11699.t1 g11699 MRTKAVFVLAVLAALAGSAVSTAPTSPTSTNLLTWLDAAATNAFQVASDGHIARWVDQSSRGQDFVQSSTSLQPMLNVASSGQVFRRDTTNAYSYYTCDYSCSCYYYQSNAMATSGGSIGSSAYRRRRFTQLLGGLLQPNPVSHIFFVTNTVGLTQSLLGPQFLFELDGATASAKLQIGSFLVSGGRAFGVLINTLTNVALVTNLLGTAPTSSEVWTFTLQPAIGGLTTFVNVYRNGVSQLLSGSILLGTPPMNGPATLGRSFEGRVSEVLVYSDMTSTNRASTTAYLCAKHGVAGC* # ORIGINAL: g11697.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 98 339 . - . ID=g11697;Name=g11697.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 98 339 . - . ID=g11697.t1;Parent=g11697;Name=g11697.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 98 339 . - . ID=g11697.t1.exon1;Parent=g11697.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 98 339 . - 0 ID=cds.g11697.t1;Parent=g11697.t1 #PROT g11697.t1 g11697 MSGVAMLATVGDAISAGASSTGGSSVDSKLLPGEDFIALSEFSELEGPVPLFVIPADGAERFDLNRFVLRIMSVDYQSLA # ORIGINAL: g11700.t1 original gene structure, not modified by PASA NODE_337_length_26591_cov_42.3604 AUGUSTUS gene 10452 11702 . + . ID=g11700;Name=g11700.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS mRNA 10452 11702 . + . ID=g11700.t1;Parent=g11700;Name=g11700.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS exon 10452 11702 . + . ID=g11700.t1.exon1;Parent=g11700.t1 NODE_337_length_26591_cov_42.3604 AUGUSTUS CDS 10452 11702 . + 0 ID=cds.g11700.t1;Parent=g11700.t1 #PROT g11700.t1 g11700 MSRSSFQELASDQRDLNWRNGWGTGGAHTTHAAPFPPTGFLQYEDPASVIRFNIAAASIEALRRLHFHSMHFLPLETEYDPHNEGLTDWPFDLGASGLLFATQSSNSSNNSNSCNNSNNYCSYSTTTRSVHTPAIGSHATKNRSVHTPAIGQYNLEVAAYPCLQTGDDEPADHAQAEEVTGLDWDSVWRSTADYASMCTTELTMYGEEWASGPTDAFETVSATALHEQTGDDFVHEHYRRAPNRGCCGITGAVAGALYPVPTAHNVQRNGRRRGIPHLPTRLARPPHAVEEDADEDGGVASDDGFLDVMFDGALDYTLDGTSDETLDGTSDGSLDGTSDGSLDGTSDGTLDGTSDGSLDGMSGARVTTVRESRNMKRAAKHAAQQRRLACRATLLTVAKSYVPGIFKDIDSLFVRK* # PASA_UPDATE: g6596.t1, single gene model update, valid-1, status:[pasa:asmbl_4370,status:12], valid-1 NODE_2464_length_6172_cov_65.2459 . gene 366 6077 . + . ID=g6596;Name=g6596.t1 NODE_2464_length_6172_cov_65.2459 . mRNA 366 6077 . + . ID=g6596.t1;Parent=g6596;Name=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 366 460 . + . ID=g6596.t1.exon1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 366 460 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 838 1005 . + . ID=g6596.t1.exon2;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 838 1005 . + 1 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 1752 1839 . + . ID=g6596.t1.exon3;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 1752 1839 . + 1 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 2406 2505 . + . ID=g6596.t1.exon4;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 2406 2505 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 3028 3110 . + . ID=g6596.t1.exon5;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 3028 3110 . + 2 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 3281 3385 . + . ID=g6596.t1.exon6;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 3281 3385 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 3719 3819 . + . ID=g6596.t1.exon7;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 3719 3819 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 4312 4381 . + . ID=g6596.t1.exon8;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 4312 4381 . + 1 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 4813 4946 . + . ID=g6596.t1.exon9;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 4813 4946 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 5246 5381 . + . ID=g6596.t1.exon10;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 5246 5381 . + 1 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 5778 5893 . + . ID=g6596.t1.exon11;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 5778 5893 . + 0 ID=cds.g6596.t1;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . exon 6062 6077 . + . ID=g6596.t1.exon12;Parent=g6596.t1 NODE_2464_length_6172_cov_65.2459 . CDS 6062 6077 . + 1 ID=cds.g6596.t1;Parent=g6596.t1 #PROT g6596.t1 g6596 MTSVGYGDITGKSNIERIFCVIVMITGVFMFSFVMGNIAAAVAAQDATRSKFREGVATVRDFLRFHGVSLQLQDMIDDYYAHEWLIKRGVDTHFYESLPEVFRADIAFEIGRSYLVKFKLFENISQDTLKAIAVRLKTLAVLDSKYVVRKGEPAEQMYFIMEGKVKIIDETTGTVYAELEKGAFFGELGLLFDIPRTVTVVTMSHCDLLQLSKADLKWAVDHANDDVLHENFHRIQKNRLQWFKDHRYLDTTNDFGGILEQELNIEILKKVDLFKDSLDEDFLASLADGMELIVYEPGDLIVRKGDEGKEMFFIHRGTVVVTADNEEEVIITMSSGYFGEVGIIYNTKRTANVRAVTHCQLMVLFRETFEHVLSHHPEIYRAVIATANARMERTKQKERRFEY* # ORIGINAL: g907.t1 original gene structure, not modified by PASA NODE_641_length_19793_cov_41.7831 AUGUSTUS gene 16944 18131 . + . ID=g907;Name=g907.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS mRNA 16944 18131 . + . ID=g907.t1;Parent=g907;Name=g907.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS exon 16944 18131 . + . ID=g907.t1.exon1;Parent=g907.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS CDS 16944 18131 . + 0 ID=cds.g907.t1;Parent=g907.t1 #PROT g907.t1 g907 MLGGVHTLNLSSTAVADVTSLGGVHSLDLCKTRVTDVSALGGVHALYMSGTRVTDVSALGGVHTLDLSDTPVTDVSALGDVHTLHVSYSSVSDVSSLGRVHTLTLSDCDGLTDVSALGGVCNLTLNLIEYPEDFVLILGVPRVRLSIQPTGDYFWEYLPGLCDALRGCTRASALVIIQTLVETCKSDQAWGDFIDSEFMFEAGYLIHLLLAAIEARMPHPMLCEGAFVTLVHAVSMEARGDDYVEIPSSAIPIVLAAMRLHSMSPRVQLDGCKLVGILLDLTRYSYAADSASCPDGRDTEMEDAFGVVMAVAERIASSPGVDSVNLYFKFAYNLSWDRTVFNVLHTFARNATSAVTALAMVDGGIMGKLLELGRAMGGVAWAIADSFDSLVRHPV* # ORIGINAL: g906.t1 original gene structure, not modified by PASA NODE_641_length_19793_cov_41.7831 AUGUSTUS gene 13253 15233 . + . ID=g906;Name=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS mRNA 13253 15233 . + . ID=g906.t1;Parent=g906;Name=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS exon 13253 13325 . + . ID=g906.t1.exon1;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS CDS 13253 13325 . + 0 ID=cds.g906.t1;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS exon 13628 13702 . + . ID=g906.t1.exon2;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS CDS 13628 13702 . + 2 ID=cds.g906.t1;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS exon 13987 14744 . + . ID=g906.t1.exon3;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS CDS 13987 14744 . + 2 ID=cds.g906.t1;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS exon 15093 15233 . + . ID=g906.t1.exon4;Parent=g906.t1 NODE_641_length_19793_cov_41.7831 AUGUSTUS CDS 15093 15233 . + 0 ID=cds.g906.t1;Parent=g906.t1 #PROT g906.t1 g906 MARFAEIVYSMRVAVIQNDKIEGPESLTTPVDETKFDTLIILGGPLCAQDAATHPHMALVVKSIRAFVLANKAVLGICLGGQLLAFAFGWRIVKTADFLAASAASVSPPTSVCESAAPTPLDRDTGGRHAFMPPHTASLRNPCVELGVCPVFLTAEGVADPLFANISREQAWFQWHSDMMQPPWWRDSGAATTRPRVDPSAHAHAAHPIDDGRVRIVADGSEPHRFPANDPTVRYVWVPPAESHGVPSVDSARTSFLVESAEWLSTESPAVLSTAAMCPVQAVRFRPGVYALQFHPEMLPEMVAIWSQGQENKQQLAHLGISPRALTDQFSRRFAETAESAVIIFATF* # PASA_UPDATE: g904.t1, single gene model update, valid-1, status:[pasa:asmbl_8638,status:12],[pasa:asmbl_8643,status:12],[pasa:asmbl_8644,status:12], valid-1 NODE_641_length_19793_cov_41.7831 . gene 2099 7825 . - . ID=g904;Name=g904.t1 NODE_641_length_19793_cov_41.7831 . mRNA 2099 7825 . - . ID=g904.t1;Parent=g904;Name=g904.t1 NODE_641_length_19793_cov_41.7831 . five_prime_UTR 7666 7825 . - . ID=g904.t1.utr5p1;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . five_prime_UTR 6730 7515 . - . ID=g904.t1.utr5p2;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . exon 7666 7825 . - . ID=g904.t1.exon1;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . exon 2658 7515 . - . ID=g904.t1.exon2;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . CDS 2658 6729 . - 0 ID=cds.g904.t1;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . exon 2099 2395 . - . ID=g904.t1.exon3;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . CDS 2238 2395 . - 2 ID=cds.g904.t1;Parent=g904.t1 NODE_641_length_19793_cov_41.7831 . three_prime_UTR 2099 2237 . - . ID=g904.t1.utr3p1;Parent=g904.t1 #PROT g904.t1 g904 MLGRVHTVDISRTCVVDVSALGGVHSLDLSGTAVTDVSALGGVHALNLSETPVTDFSMLGGVHTLNLSSTAVADVTSLGTLHTLTLCKTRVTDVSALGVVHALYMSGTGVTDVSALGGVHTLDLSDTPVTDVSALGGVHALCISGTRVTDVSALSGVHILDLSDTPVTDVSALGDVHTLHVSYSSVSDVSSLGRVHTLTLSGCDGLTDVSALGGVCCLTLNLIETPKHFQLVLGVPRVRLSIQPTGDYFWEYLPGLCDALEGCTLASALVIIQTLVETCKSDKAWGDYMADAFEAGRLVRLLLAVVDTHMPHRRLCEGAFATLMHAVSKTFWGDRNIEVPCGAIGIVIAVMQMHSTNPRMQLDGCKLVDTLLCRTRNPYAVDSAICPDSRDTEMEDAFGVVMAAAERIASFPSVDRVNDYCKFARNLSGDITVFYVLDAFARNATSAVTALAMVDGGIMGKLLALGGALSNMFFAIGPAFDAFARHPVCRARMVANGNAQSVLDFIVSNRWESEPLLYLTIRGVKDATSRESERARLLEVLAALSVRGYCEDIKSTLTVFKIVCHAVRTHLRDGAVIRAAIHCLEELATWEWESYFPSSHSMRLGIIDVCMSALSLVDITQDDPSSNDCRAAATDASCGETGCDNCTISHITAIAVRFLCALGVGHRMEFHFMAATKVMGRLPACWDGDYRVATSSCSDGSCVRKCLAEWHALLQADLITFSCTSFFGWMIPVVLELSEEIAAIVDRHTDEATRKEAGAFLAYLDKILGGGEGAGGLRVTTRRAIAFIARDLRMRTDLFTMLSDDVDEGWRPIWADYKRTFYAMGGATMVLTDVSLQRADNKPFSRVCEGAFATLMHAVSKTFWGDRNIEVPCGAIGIVIAVMQLHSTNPRMQLDGCKLVDTLLCRTRNPYAVDSAICPDSRDTEMEDAFGVVMAAAERIASFPSVDRVNDYCKFARNLSGDITVFYVLDAFARNATSAVTALAMVDGGIMGKLLALGGALSNMFFAIGPAFDAFARHPVCRARMVANGNAQSVLDFIVSNRWESEPLLYLTIRGVKDATSRESERARLLEVLAALSVRGYCEDIKSTLTVFKIVCHAVRTHLRDGAVIRAAIHCLEELATWEWESYFPSSHSMRLGIIDVCMSALSLVDITQDDPSSNDCRAAATDASCGETGCDNCTISHITAIAVRFLCALGVGHRMEFHFMAATKVMGRLPACWDGDYRVATSSCSDGSCVRKCLAEWHALLQADLITFSCTSFFGWMIPVVLELSEEIAAIVDRHTDEATRKEAGAFLTYLDKILGGGEGAGGLRVTTRRAIAFIARDLRMRTDLFTMLSDDVDEGWRPIWADYKRTFYAMGVIRGTCIDALDAPLVRVAADWTAGLLECFSDDDEGTIDGGEEEYLSNDSDST* # PASA_UPDATE: g905.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8640,status:3], valid-1 # PASA_UPDATE: g905.t1, single gene model update, valid-1, status:[pasa:asmbl_8639,status:3], valid-1 NODE_641_length_19793_cov_41.7831 . gene 8099 10144 . - . ID=g905;Name=g905.t1 NODE_641_length_19793_cov_41.7831 . mRNA 8099 10144 . - . ID=g905.t1.1.5b6be70c;Parent=g905;Name=g905.t1 NODE_641_length_19793_cov_41.7831 . five_prime_UTR 10022 10144 . - . ID=g905.t1.1.5b6be70c.utr5p1;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . five_prime_UTR 9700 9813 . - . ID=g905.t1.1.5b6be70c.utr5p2;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . exon 10022 10144 . - . ID=g905.t1.1.5b6be70c.exon1;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . exon 9652 9813 . - . ID=g905.t1.1.5b6be70c.exon2;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . CDS 9652 9699 . - 0 ID=cds.g905.t1.1.5b6be70c;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . exon 9455 9536 . - . ID=g905.t1.1.5b6be70c.exon3;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . CDS 9455 9536 . - 0 ID=cds.g905.t1.1.5b6be70c;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . exon 8972 9274 . - . ID=g905.t1.1.5b6be70c.exon4;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . CDS 8972 9274 . - 2 ID=cds.g905.t1.1.5b6be70c;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . exon 8099 8674 . - . ID=g905.t1.1.5b6be70c.exon5;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . CDS 8535 8674 . - 2 ID=cds.g905.t1.1.5b6be70c;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . three_prime_UTR 8099 8534 . - . ID=g905.t1.1.5b6be70c.utr3p1;Parent=g905.t1.1.5b6be70c NODE_641_length_19793_cov_41.7831 . mRNA 8099 10144 . - . ID=g905.t1;Parent=g905;Name=g905.t1 NODE_641_length_19793_cov_41.7831 . five_prime_UTR 9943 10144 . - . ID=g905.t1.utr5p1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . five_prime_UTR 9700 9813 . - . ID=g905.t1.utr5p2;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . exon 9943 10144 . - . ID=g905.t1.exon1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . exon 9652 9813 . - . ID=g905.t1.exon2;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . CDS 9652 9699 . - 0 ID=cds.g905.t1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . exon 9455 9536 . - . ID=g905.t1.exon3;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . CDS 9455 9536 . - 0 ID=cds.g905.t1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . exon 8972 9274 . - . ID=g905.t1.exon4;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . CDS 8972 9274 . - 2 ID=cds.g905.t1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . exon 8099 8674 . - . ID=g905.t1.exon5;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . CDS 8535 8674 . - 2 ID=cds.g905.t1;Parent=g905.t1 NODE_641_length_19793_cov_41.7831 . three_prime_UTR 8099 8534 . - . ID=g905.t1.utr3p1;Parent=g905.t1 #PROT g905.t1.1.5b6be70c g905 MDYLSSVAGWVWPAKQNDAPVDESVFEVEGVAEDWVLIQDCVSGAAAEATSSLRSTATTPSKSLSRTSSEMAYHREFDGSSQQTMTATMDGPTMSTGGAALALTSSSPPLSPVLAIDVSVQARRMAKAERLARDASSRTRSRRGGATSSRNNQAHTNSAASSVGARHKNNTKFFGGHTHQPRRDAGFNKK* #PROT g905.t1 g905 MDYLSSVAGWVWPAKQNDAPVDESVFEVEGVAEDWVLIQDCVSGAAAEATSSLRSTATTPSKSLSRTSSEMAYHREFDGSSQQTMTATMDGPTMSTGGAALALTSSSPPLSPVLAIDVSVQARRMAKAERLARDASSRTRSRRGGATSSRNNQAHTNSAASSVGARHKNNTKFFGGHTHQPRRDAGFNKK* # PASA_UPDATE: g903.t1, single gene model update, valid-1, status:[pasa:asmbl_8641,status:12], valid-1 NODE_641_length_19793_cov_41.7831 . gene 248 1104 . + . ID=g903;Name=g903.t1 NODE_641_length_19793_cov_41.7831 . mRNA 248 1104 . + . ID=g903.t1;Parent=g903;Name=g903.t1 NODE_641_length_19793_cov_41.7831 . exon 248 319 . + . ID=g903.t1.exon1;Parent=g903.t1 NODE_641_length_19793_cov_41.7831 . CDS 248 319 . + 0 ID=cds.g903.t1;Parent=g903.t1;5_prime_partial=true NODE_641_length_19793_cov_41.7831 . exon 744 1104 . + . ID=g903.t1.exon2;Parent=g903.t1 NODE_641_length_19793_cov_41.7831 . CDS 744 980 . + 0 ID=cds.g903.t1;Parent=g903.t1 NODE_641_length_19793_cov_41.7831 . three_prime_UTR 981 1104 . + . ID=g903.t1.utr3p1;Parent=g903.t1 #PROT g903.t1 g903 LIQTGKTTRNNRTGRLERSPDVKKAYVVLGQSFSFPDLFKEKKDDDSAEDEDRPGHSRKGSGRSRRPVRTNTAATGDSVRALEGGAGVGNGAPLKTNLLDAR* # ORIGINAL: g2046.t1 original gene structure, not modified by PASA NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS gene 324 1010 . - . ID=g2046;Name=g2046.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS mRNA 324 1010 . - . ID=g2046.t1;Parent=g2046;Name=g2046.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS exon 324 1010 . - . ID=g2046.t1.exon1;Parent=g2046.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS CDS 324 1010 . - 0 ID=cds.g2046.t1;Parent=g2046.t1 #PROT g2046.t1 g2046 MADRAASMAANKEELARNEGSSSSTKRSCPREAFSNPPEIVYQSAPRTSSGKHLGPVSHEKLEYALVTVEGYLNRLVRAVRRASPLYLVLVEQFDHLEMTTLCREVNVPVTVRAVLRQIANNVVVNDSVANASKKSQRRLHDARRCPMSVSVNRPTLTSTSSDKPRRSDTSLAPSETSISSTKNKAGDAQRKLLQLKWGFRTFVRSRKIRAVWSTHVLSRESMTLFAL* # ORIGINAL: g2047.t1 original gene structure, not modified by PASA NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS gene 1253 1897 . + . ID=g2047;Name=g2047.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS mRNA 1253 1897 . + . ID=g2047.t1;Parent=g2047;Name=g2047.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS exon 1253 1897 . + . ID=g2047.t1.exon1;Parent=g2047.t1 NODE_4194_length_2040_cov_25.6427_potentialcontaminant AUGUSTUS CDS 1253 1897 . + 0 ID=cds.g2047.t1;Parent=g2047.t1 #PROT g2047.t1 g2047 MRSDYAVDAEFVVPQLNGVELDHAAQFLLPYGAMDGLRWMKEKQLLGSRCMKLLDGFGCWSSSYIPSDLNEKMPKFVPTCEAVELVITLMREEEVFQKTLVHEDPWEVRVAKAWYAPAIARGDLTVLRYLCKSVNIFRVFSHRGACAAQGDDAAVAAGHTDMVVYMMDVNACAVPVRNGALHPKVFHPVKHPFNLVQCTEDGRTYGPLCVGAYD* # ORIGINAL: g12318.t1 original gene structure, not modified by PASA NODE_2383_length_6475_cov_38.5733 AUGUSTUS gene 389 4453 . + . ID=g12318;Name=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS mRNA 389 4453 . + . ID=g12318.t1;Parent=g12318;Name=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS exon 389 503 . + . ID=g12318.t1.exon1;Parent=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS CDS 389 503 . + 1 ID=cds.g12318.t1;Parent=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS exon 1000 1236 . + . ID=g12318.t1.exon2;Parent=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS CDS 1000 1236 . + 0 ID=cds.g12318.t1;Parent=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS exon 1397 4453 . + . ID=g12318.t1.exon3;Parent=g12318.t1 NODE_2383_length_6475_cov_38.5733 AUGUSTUS CDS 1397 4453 . + 0 ID=cds.g12318.t1;Parent=g12318.t1 #PROT g12318.t1 g12318 EPVPKGPEGMPGRDFFEKTNQPIVKAIREGDDPSVYKLVLSKSATAALIGHGNTVIHCCAYFNRGDLAENLVSDYGCLPGSADRNYHNLTPLDIVKCQHPKNGDIEIFRKIEQRCKEEKEEKRRMLDRANRAKQATLREQQQEAEAKRMREERAVREAAKERERKRREAEEAPRRQQREKMAAAAWEKKQAERLKLGLKPLNADGSVPTDTEDDDDEGGENAHRVSPGADDSGDEDAAASASGKKKKNKKKNKKKATSTTTTAGETAEKPASTTAKTHDSQAKTSPARVADQPPTPTVTTPATPAASATPAPTPSAPSVSSQAARVSHPPAAIPLTAPLPSAPASAADINSQASQPKRTKVTKPSKSTPAKDASVAPTPTAPQQEKKHPGYIPDAVPTFASVQPRPVEPVDESDPDQMIATLLDMGFSYEIATKAVRSAAELNDAIARALGLQEVEEAAERRQEEEERLRAEKERVHKQEQQQRARKEAEERERERLAKAAATASASASAAMASKKETAQTHPSSHSSAHNAPVKGPTAPQVTSGAPTQTPIQPHATPVPRAAPAPKEPPKPKVQPFVQVVNHHVTAPEPVASRLSVGDFLFREGQRVLPCTFAKKGYCRHRNECMFRHVTAEIKGGFRPDQHESLFEEGFVDPIPAGQFVFRETAFPGLDTKSDAKSHVKNGSVAAAGGVSTAADTIADTTAPASWTAAASGAASGVATAAVDSVLPSSAPVHAPAAPHSSTPALATHTVPKPHPKHAVRTEAFSPRKSTLTPPSNSPRKDTHAESAPESHQRPNTSNVTAQAHAPERSFAVPSPATSRAKVSGKGHVGAHPQTHAAPPIGSYIAPPTHVAPATVQVKTAQPRTFIKAAPRLSPAPPGHPGHAGASAHTSAHTSAQSSHISAQSSNPHVGAKRELAFASGSSSSSTAEHAIPAISRQHNGPSHATGFNRQAHGLPATALSAPTAATAPTAPTTSKLSSAAPSFAPAANPFMAPLGMVGAGGAAQWSPSIGDAAALAQASNLNMYAFAQHYNAFAAAGGMPMSMWNGSGVPPGLQSAGWGNPLYAHAQSQFIGNDGAQSMQSVHGMQNMNVQGLDAYASFYNFGFPQQNAAAGMGLFTPQQPTDGGRTFAGASAF* # PASA_UPDATE: g12319.t1, single gene model update, valid-1, status:[pasa:asmbl_4186,status:12], valid-1 NODE_2383_length_6475_cov_38.5733 . gene 4711 6365 . - . ID=g12319;Name=g12319.t1 NODE_2383_length_6475_cov_38.5733 . mRNA 4711 6365 . - . ID=g12319.t1;Parent=g12319;Name=g12319.t1 NODE_2383_length_6475_cov_38.5733 . five_prime_UTR 6364 6365 . - . ID=g12319.t1.utr5p1;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . exon 6157 6365 . - . ID=g12319.t1.exon1;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . CDS 6157 6363 . - 0 ID=cds.g12319.t1;Parent=g12319.t1;5_prime_partial=true NODE_2383_length_6475_cov_38.5733 . exon 5777 5923 . - . ID=g12319.t1.exon2;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . CDS 5777 5923 . - 0 ID=cds.g12319.t1;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . exon 5113 5256 . - . ID=g12319.t1.exon3;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . CDS 5113 5256 . - 0 ID=cds.g12319.t1;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . exon 4711 4896 . - . ID=g12319.t1.exon4;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . CDS 4843 4896 . - 0 ID=cds.g12319.t1;Parent=g12319.t1 NODE_2383_length_6475_cov_38.5733 . three_prime_UTR 4711 4842 . - . ID=g12319.t1.utr3p1;Parent=g12319.t1 #PROT g12319.t1 g12319 SHVDFGNLTSSGRDCVVGATSLTEANYQQFNKTDPNFLTALRASSAVPGVFPAVSLNGQEYVDGGAEYMTPVADAIQRCKKVADDVTVDVILCVGFELPASNYKWNTPALLLRTIAMKLTDILMKDIQNARVAYPDAKIRVIYPTVWLPGFFLDFDPKNSQFMIEQGYKDAVSVLKSEAASRA* # PASA_UPDATE: g8580.t1, single gene model update, valid-1, status:[pasa:asmbl_8064,status:12], valid-1 NODE_5424_length_857_cov_40.656 . gene 119 857 . - . ID=g8580;Name=g8580.t1 NODE_5424_length_857_cov_40.656 . mRNA 119 857 . - . ID=g8580.t1;Parent=g8580;Name=g8580.t1 NODE_5424_length_857_cov_40.656 . five_prime_UTR 857 857 . - . ID=g8580.t1.utr5p1;Parent=g8580.t1 NODE_5424_length_857_cov_40.656 . exon 824 857 . - . ID=g8580.t1.exon1;Parent=g8580.t1 NODE_5424_length_857_cov_40.656 . CDS 824 856 . - 0 ID=cds.g8580.t1;Parent=g8580.t1;5_prime_partial=true NODE_5424_length_857_cov_40.656 . exon 378 559 . - . ID=g8580.t1.exon2;Parent=g8580.t1 NODE_5424_length_857_cov_40.656 . CDS 378 559 . - 0 ID=cds.g8580.t1;Parent=g8580.t1 NODE_5424_length_857_cov_40.656 . exon 119 254 . - . ID=g8580.t1.exon3;Parent=g8580.t1 NODE_5424_length_857_cov_40.656 . CDS 119 254 . - 1 ID=cds.g8580.t1;Parent=g8580.t1;3_prime_partial=true #PROT g8580.t1 g8580 RAVFSSVAAVQEDRTVDNGAIRIVIDGVSGRIKSIDNLVTGETAAVTQDFLYYEAFVSSFGDTQASGAYIFRPAVNDAKQINNGTIAVTIVDGPVVKEIRQTFAPWLTQTIRLYAGQ # ORIGINAL: g5269.t1 original gene structure, not modified by PASA NODE_2148_length_7500_cov_36.7446 AUGUSTUS gene 153 312 . - . ID=g5269;Name=g5269.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS mRNA 153 312 . - . ID=g5269.t1;Parent=g5269;Name=g5269.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS exon 153 312 . - . ID=g5269.t1.exon1;Parent=g5269.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS CDS 153 312 . - 0 ID=cds.g5269.t1;Parent=g5269.t1 #PROT g5269.t1 g5269 MMSAGVRPFLNLFGSLVRNRAVHDTASATATALHAMAWKSDGRTNDELVNNLK # PASA_UPDATE: g5271.t1, single gene model update, valid-1, status:[pasa:asmbl_3621,status:12], valid-1 NODE_2148_length_7500_cov_36.7446 . gene 5612 7352 . - . ID=g5271;Name=g5271.t1 NODE_2148_length_7500_cov_36.7446 . mRNA 5612 7352 . - . ID=g5271.t1;Parent=g5271;Name=g5271.t1 NODE_2148_length_7500_cov_36.7446 . exon 7314 7352 . - . ID=g5271.t1.exon1;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . CDS 7314 7352 . - 0 ID=cds.g5271.t1;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . exon 6321 7053 . - . ID=g5271.t1.exon2;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . CDS 6321 7053 . - 0 ID=cds.g5271.t1;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . exon 5612 5948 . - . ID=g5271.t1.exon3;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . CDS 5821 5948 . - 2 ID=cds.g5271.t1;Parent=g5271.t1 NODE_2148_length_7500_cov_36.7446 . three_prime_UTR 5612 5820 . - . ID=g5271.t1.utr3p1;Parent=g5271.t1 #PROT g5271.t1 g5271 MDVVAAKLDSLGTTDSIHLWNISPLEPPTPLDASKHRHSLRFMHLHLSPSVQIGIDLPVLVTLAITDCGLIDSDFSEGAWLGDLSPLVNVRRLYFGQNHLRVIPAPIFKLQSLLVLSLPNNKIVEISPDIQLLQSLRYLALDSNQLERLDPAILTLPRLRGFSASHNRLATEPMEVKQLLNVVHVMNFAGNPFLTNTGAPSTASVVGLDPLRKSRHLTLTPVMVRSNRKSSSLLLPKRDSPSTPTVEPSDAGNAADGGAPATVPSEGLPVPFRTLRRSSSAGASLTLPIRPAVDTESKS* # ORIGINAL: g5270.t1 original gene structure, not modified by PASA NODE_2148_length_7500_cov_36.7446 AUGUSTUS gene 1501 4918 . + . ID=g5270;Name=g5270.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS mRNA 1501 4918 . + . ID=g5270.t1;Parent=g5270;Name=g5270.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS exon 1501 3703 . + . ID=g5270.t1.exon1;Parent=g5270.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS CDS 1501 3703 . + 0 ID=cds.g5270.t1;Parent=g5270.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS exon 4026 4918 . + . ID=g5270.t1.exon2;Parent=g5270.t1 NODE_2148_length_7500_cov_36.7446 AUGUSTUS CDS 4026 4918 . + 2 ID=cds.g5270.t1;Parent=g5270.t1 #PROT g5270.t1 g5270 MAPVPNPRDERRRSSIDYRSIGIHVDDGEDEVARSKTKSRFLSVNNEADETSVDSVYVEDGRQHQRTSASELGGFVNIHRKVRDDVFYALGTTKQGLSSAEARARAAEFGPNEMPRVHANVGWLRRFFAQFLDPFAILLAVSAIFDLIIYLTVEHETNVLIMSVAIMVVVVLNASIGVLQEYSASRAAKALVALLPHRTIALRDGHRVSLAASELVPGDVVILEEGDAISADARVVESTGLTVNNLALTGESQPIVRTDDPADPDALLADAPNIVFMGTVVAGGRGIAVVFATGRNTCIGGVFATTANIPDRPSPLQRKIKTMAKAVFAIAAILGVAQFVLGIGLNRGAHAMSSLILAVGVMVALVPEGMPATLSVSLAVAGRRLARRMMIVKRLTTVETLGSANVFCVDKTGTITTAEMTVVNVWASGRDHRVIGVGYEPVGVVENAPGVHETLTTAALCSNAIMCPPVAGTSIGWRCLGDTMEGAILVAAEKAGIDIAAVRCMKPRLRENPFDPTRKLMSTVHGRAAAGAGASAGKLETGVDLMAKGTPETVLARCAAVLWDGTVVPLTTELRLRILHATDAMAMNGLRVLAVARRAVESDAWKAVSASQLECRLTLCGLLGIMDPPRDDARGAMRTLVRAGLRPVMLTGDYGLTAFAIARQVGIVGQTGNADCVVTGDELDAMDNAALSLALAVTPEHGLRPLIFARTKPEHKMRVVAALQNMGNIVAVTGDGINDAPALRMADVGVAMGSGTDVAKESAVVILTDDSLATLPAAVEIGRSVADNLRRMLMYIFTHNVSELVPSLAAAAAGMRLPALNALQVLAIDLGSDVLPALALGTERPERDVLDRSPVSPNERLFSMTSFMRLAFLGAIQSAAVVNLFFLHMMDYEGSFSRVEASDPVYQRAATAAQAAIVVVQFFNAHSVRSDLDSVLTVGLLSNRFLLAAETLGLCIMCAISYIPYLQTAFSTVALSGLDWGICFGWGVFSLVAEELRKAYMRYRRRRETANAIMSGMRTGLLTGAPSSRYS* # ORIGINAL: g14351.t1 original gene structure, not modified by PASA NODE_1249_length_12758_cov_49.4821 AUGUSTUS gene 6294 8780 . - . ID=g14351;Name=g14351.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS mRNA 6294 8780 . - . ID=g14351.t1;Parent=g14351;Name=g14351.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 6294 8780 . - . ID=g14351.t1.exon1;Parent=g14351.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 6294 8780 . - 0 ID=cds.g14351.t1;Parent=g14351.t1 #PROT g14351.t1 g14351 MWAFVLSVVAAFISGAVALLAAQAYLVHVFYVSKAAGAGIGPIKPSRLRDHIDVVNDLSAKNVSPSLASVSSATFEDIARKRLPPHETCDWLNILLAFIFRYIRDTDAADEFFQRKIRVEFDELLATAAGKVIEDIRVREYRMGECLPLFSQARILIVEADELVIAVDVAYEGGFQVVLDADLVFGMGASLSVTLASLRGRVRLRLAGTPRPHWSFAFYEEPEIEFKVESILNGRPMPHLTTLIVNQFRRSIRKKHTLPSFKPRQLVPSIAPRGPPLTPAEVIRESCKRLVLGLGHLHAARSDCRDSDTDYVLVDGNPLLSGVLRVRVGKLSGLPLPIQSVSGKEKDKDGKKDESKDLSEARPVFVEMEAECGAASASAIDLDMRVGSIDRQDRRIYSRHNPIGEGQSHAVLRTEPFSCGCSGEADADAEAALRLGADSTSLLFRVYCKGRTAKEPASAQATSSLPHFSAPFPGALLCAKGEVFLEDIILEITAGGNHSVHRRIYLDTCGGKDVWGNRTALDPAISITVLFSFEPRPSIPNAATVDPDTSSLTGTASKNIPDHLSVPDCDQRSHSAPGSPVAACCAVSRTNCKKGLPGLTKRDSDSLSLQSSDASEPWASDCSLHGSVSVGRLPGEETTTWHRFAIDKFSAPLPRCEYCGGKVWRMKAFQCQACKYICHQKCLAECVRNTVCPKARVFQEQQQFSFQQQQVQLQQHEHCGADDISGSALTEPMRSKIDIPSPLEIATAESDGASALRSRTLTESIENLQCELDTESERRDSLARMLQSTSNRREAEAVRRQLQESLGECELRMQHIAMRMLRQLEDGE* # ORIGINAL: g14353.t1 original gene structure, not modified by PASA NODE_1249_length_12758_cov_49.4821 AUGUSTUS gene 10619 11820 . - . ID=g14353;Name=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS mRNA 10619 11820 . - . ID=g14353.t1;Parent=g14353;Name=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 11725 11820 . - . ID=g14353.t1.exon1;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 11725 11820 . - 0 ID=cds.g14353.t1;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 11270 11632 . - . ID=g14353.t1.exon2;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 11270 11632 . - 0 ID=cds.g14353.t1;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 10953 11150 . - . ID=g14353.t1.exon3;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 10953 11150 . - 0 ID=cds.g14353.t1;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 10619 10858 . - . ID=g14353.t1.exon4;Parent=g14353.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 10619 10858 . - 0 ID=cds.g14353.t1;Parent=g14353.t1 #PROT g14353.t1 g14353 MQGLSTYPGALLAIEDEVAERTGLVPRELALFSITLKRERHAKYLASLSDEEKRKFFNAVRQMLFAAVDNPHFSGAYRDRGLVFRRKSSANVPTSVCPVHEMARLILLESLFSYGVPEDDILRMFREPLSAGTGRVYALKSLSCNGSFLSAMTCWENRAIRFPRPYFPRFDLLFDTSECTVFIQVSIRTVSGYDRDTKELHLAFEPMFTRDSSGRSRSQEQDDHHAHEPRNQPHAEVGENVAFSSAPHRWDEAPAIFLFVSFAKCPSSPLTGLKYDNLRVVYREHLQKAYPALKKVED* # ORIGINAL: g14352.t1 original gene structure, not modified by PASA NODE_1249_length_12758_cov_49.4821 AUGUSTUS gene 8943 10153 . + . ID=g14352;Name=g14352.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS mRNA 8943 10153 . + . ID=g14352.t1;Parent=g14352;Name=g14352.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 8943 8956 . + . ID=g14352.t1.exon1;Parent=g14352.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 8943 8956 . + 0 ID=cds.g14352.t1;Parent=g14352.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 9712 10153 . + . ID=g14352.t1.exon2;Parent=g14352.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 9712 10153 . + 1 ID=cds.g14352.t1;Parent=g14352.t1 #PROT g14352.t1 g14352 MDYNRNDKARRARYIEFEGCVACADLDHRADVWPHSALGRYVCPTAPQRRSKPTFHRDPQLADLSRPVADPLVNRPTRPFDGTRVVNALDAYNTSTYGKTDLDVTILDSALSLLHALAVRISNPTDFWAMIYSYLLPPSAHDEMHTTSADA* # ORIGINAL: g14350.t1 original gene structure, not modified by PASA NODE_1249_length_12758_cov_49.4821 AUGUSTUS gene 397 4989 . + . ID=g14350;Name=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS mRNA 397 4989 . + . ID=g14350.t1;Parent=g14350;Name=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 397 575 . + . ID=g14350.t1.exon1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 397 575 . + 0 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 1294 1387 . + . ID=g14350.t1.exon2;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 1294 1387 . + 1 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 1522 1679 . + . ID=g14350.t1.exon3;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 1522 1679 . + 0 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 2014 2119 . + . ID=g14350.t1.exon4;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 2014 2119 . + 1 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 2510 2923 . + . ID=g14350.t1.exon5;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 2510 2923 . + 0 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 3405 3953 . + . ID=g14350.t1.exon6;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 3405 3953 . + 0 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 4125 4321 . + . ID=g14350.t1.exon7;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 4125 4321 . + 0 ID=cds.g14350.t1;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 4467 4989 . + . ID=g14350.t1.exon8;Parent=g14350.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 4467 4989 . + 1 ID=cds.g14350.t1;Parent=g14350.t1 #PROT g14350.t1 g14350 MRLSVHFVGRLSLSAALRRHVYRDGAAAIQSRRAHATIVPTLDRETHEHLTTHDGDPNAGFMRDTTAPDVVATKEALMRDAVSEAVMLHQENALRRFGLESLDSARSKENCDAAARELREAHCFDIQLSTALLEAYSAQILELDNANTVLINQVEQAWEYVSTTPGMKVTTKLFQNMISALVRTGRVEKAHELFSAVLTEKRDEVGMERKAAKFAAVSLLDPTVRSIMAGYAATGDVRACMALYASMKDSSPPILPLPGTMELMLTICMDAARAERSAMASSDVRAFAQDVADSMVQRRVVPTREFAARVRADNGKLLHPAFLQWLSDASDAAKQSSEPPPPRTPPRLPPRIKSVSERVKISPGDASSASVDSWPDEIVDHMRPIMAANPLRALAYFDDLVAAGKRDQILQRRGSLVSDPATFALANLAAHLEARTGAMADAPNGGASHTEFLESDTRIQYVTDTVVDMLRRSFTTSRSAEDFIGSVFKKYSRAGKGLSDATAKKIEPETVLVLMRALSGGKEFRVAVHRLLFECEQKLDVTLTGPMFHEVLKAFASRVFIAKFMEIEAKLAKSVYHKVVNVHPRTRFLAFELHAGFDTANNMRTAIKWMSGAYGGLPDTTHRLLSGPDSPMHPPGENPPAQPLVADSAGHSKQLPSSKDMDEAVETGVLVGGLNIKSLRRVYRTSFSLHSQKESHSSPHMTGETDTEMTMKEVAVSVAKYLKLHGQRYPDGARLLFSP* # ORIGINAL: g14354.t1 original gene structure, not modified by PASA NODE_1249_length_12758_cov_49.4821 AUGUSTUS gene 12167 12520 . + . ID=g14354;Name=g14354.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS mRNA 12167 12520 . + . ID=g14354.t1;Parent=g14354;Name=g14354.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS exon 12167 12520 . + . ID=g14354.t1.exon1;Parent=g14354.t1 NODE_1249_length_12758_cov_49.4821 AUGUSTUS CDS 12167 12520 . + 0 ID=cds.g14354.t1;Parent=g14354.t1 #PROT g14354.t1 g14354 MAGAAAWDATIHSVSPAMQQRVQSTLDACMITGGACMSANTVRAFIRRAVKRAQLTLWCYDTYLRDRYPATAEEARVCLPVELHTSTLLVIEMLCKAVAAHAAGLAYLLIQNARDAR* # ORIGINAL: g2799.t1 original gene structure, not modified by PASA NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS gene 72 782 . - . ID=g2799;Name=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS mRNA 72 782 . - . ID=g2799.t1;Parent=g2799;Name=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS exon 645 782 . - . ID=g2799.t1.exon1;Parent=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS CDS 645 782 . - 2 ID=cds.g2799.t1;Parent=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS exon 339 474 . - . ID=g2799.t1.exon2;Parent=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS CDS 339 474 . - 2 ID=cds.g2799.t1;Parent=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS exon 72 195 . - . ID=g2799.t1.exon3;Parent=g2799.t1 NODE_5262_length_942_cov_29.767_potentialcontaminant AUGUSTUS CDS 72 195 . - 1 ID=cds.g2799.t1;Parent=g2799.t1 #PROT g2799.t1 g2799 RTQPIAHPTLSDAAVSLLLSTLEKSIDYARRFNSTTLLRQTLLDAGLVKKLPNMYKQEVTATDAYITALFVLFEDETRPKIAESATLKLVRRCEAVCQDYVSSFKNGVREHKQWTQIVITMLKMMLEIKADK # ORIGINAL: g13080.t1 original gene structure, not modified by PASA NODE_414_length_24238_cov_52.7664 AUGUSTUS gene 4855 10450 . + . ID=g13080;Name=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS mRNA 4855 10450 . + . ID=g13080.t1;Parent=g13080;Name=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 4855 4910 . + . ID=g13080.t1.exon1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 4855 4910 . + 0 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 5148 5225 . + . ID=g13080.t1.exon2;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 5148 5225 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 5354 5457 . + . ID=g13080.t1.exon3;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 5354 5457 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 5679 5763 . + . ID=g13080.t1.exon4;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 5679 5763 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 5967 6072 . + . ID=g13080.t1.exon5;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 5967 6072 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 6285 6375 . + . ID=g13080.t1.exon6;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 6285 6375 . + 0 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 6537 6654 . + . ID=g13080.t1.exon7;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 6537 6654 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 6810 6922 . + . ID=g13080.t1.exon8;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 6810 6922 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 7064 7128 . + . ID=g13080.t1.exon9;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 7064 7128 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 7296 7500 . + . ID=g13080.t1.exon10;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 7296 7500 . + 0 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 7911 8018 . + . ID=g13080.t1.exon11;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 7911 8018 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 8199 8243 . + . ID=g13080.t1.exon12;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 8199 8243 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 8461 8567 . + . ID=g13080.t1.exon13;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 8461 8567 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 8724 8832 . + . ID=g13080.t1.exon14;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 8724 8832 . + 0 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 8985 9093 . + . ID=g13080.t1.exon15;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 8985 9093 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 9270 9364 . + . ID=g13080.t1.exon16;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 9270 9364 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 9636 9738 . + . ID=g13080.t1.exon17;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 9636 9738 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 9897 10000 . + . ID=g13080.t1.exon18;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 9897 10000 . + 1 ID=cds.g13080.t1;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 10368 10450 . + . ID=g13080.t1.exon19;Parent=g13080.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 10368 10450 . + 2 ID=cds.g13080.t1;Parent=g13080.t1 #PROT g13080.t1 g13080 MFYSHEILSRKGGKLGIVWIAATFNSKNVPISKREYKSVSVVNVCDEVAHPPAPFSLRLSSNLLVGISRIYERQTNYFWSDTRQLLYSVNRAHVTASSAIELNQPQARFEAITLPTAALNSSIDYTFEEISSQMLMEGNAGRAGDGEFISVPLYRQRRASDANHLADPSNSPIGGGLAHVAHHANIRLVEKDLDTTRTSIEIPGDDFGGNFDGGFGGEDAFFGVLEHQPSLAGSFRTRSSLNDTRDSRGGVSSHDDTGMIGGDADIAFIGDNGYDMMQIDAPGPAVDAKEADPAGLQGRRKRKRTLLVDADIQLNKDAYRTQLIDTSAITHPPGCTGLEASFGRTDASRPSWIGSFEKELGSLCNSKTKRFGGEGKCVRGLNSSNETAGTDGTRLGQPAPVDDSFGGGDYYDDPNISNEISLNITRDSIPEDVELLRAAEKGDRLSLPRGRLSLPWSVSPAVSDASKRRDSLLRRGPSPLSDRGDGQGDRDPSDGEPRPRRSGRRSSVAPGLGLAARGLSPLTEAATMENLGEEMAVEYEGYTTGSYDAFSAAGAMIEEETRDFLTYFTSKLDGNEATLGSILPDNAVRLVAAKAFLHVLSLASHSILSVAQSRAYGPIALSRGLAY* # PASA_UPDATE: g13082.t1, single gene model update, valid-1, status:[pasa:asmbl_7026,status:12], valid-1 NODE_414_length_24238_cov_52.7664 . gene 19955 22150 . - . ID=g13082;Name=g13082.t1 NODE_414_length_24238_cov_52.7664 . mRNA 19955 22150 . - . ID=g13082.t1;Parent=g13082;Name=g13082.t1 NODE_414_length_24238_cov_52.7664 . exon 19955 22150 . - . ID=g13082.t1.exon1;Parent=g13082.t1 NODE_414_length_24238_cov_52.7664 . CDS 19955 22150 . - 0 ID=cds.g13082.t1;Parent=g13082.t1 #PROT g13082.t1 g13082 MRSGAFSLQGGRSALKVSRLAGVIRRVQVVSVVGFGLIVFVAILYYVNLVQLSEVKGSFSVGGCEGEQCEGNAVQSSQTAALSSYASTEHASTELARAEPRLLQTIASDPRIPSIDSARASVATHEAITTGLSSTTSPLAIATVTVTSEVAIDTHVAPTSTSPVGLATVTPTAATEVPLHPPVVFPSLSRSADAVIHIATGLATVPPYLSSSSAHGVSATTYPPVQPSPNPARDGDAPKYFFAVQVFGPNNQYYTFIDGIKVARALKRTIVRIPYIDHSSNIGHYTFKKPTELTFDVDRLDAVLGTLGVRTIGDSAFSEVLDRTNRTLDFCLQTQTNEWYGRICRQLVGGATCKQSFHVDARNWPEIGDYSEASLRTRFRENVTDVPILSIDTLFWANKFYKPNRRTLLHGGLSYRDEHLQILRGLTHAKGIVDAATAFISAVLGDIEKPSYLAAHWRRADFGDRPNCTNLLQCVDAVSRDDLITLLNSALLTVRSSGELPWSAVPIVYLATNKPVTAEDRQAFAASGYPRVITFNSSIVDPGEPYYESLIEQEICLRSLAFVSSRVSTWSDRVLETRIALGYRHTWSSANMLRSEFDSTPLAIPAAALALSKSLSWPETLVCGYEFMGVSHETPRVMSLICPPGTVVSSVVFASYGAPSGVCHMFVADPRCHDPTSVDVVRELCVGKTACELPVTSTPLTSRGFGMARCDTGGFALAVSLQCTLIPPGTP* # PASA_UPDATE: g13079.t1, single gene model update, valid-1, status:[pasa:asmbl_7024,status:12], valid-1 NODE_414_length_24238_cov_52.7664 . gene 174 4076 . - . ID=g13079;Name=g13079.t1 NODE_414_length_24238_cov_52.7664 . mRNA 174 4076 . - . ID=g13079.t1;Parent=g13079;Name=g13079.t1 NODE_414_length_24238_cov_52.7664 . five_prime_UTR 3994 4076 . - . ID=g13079.t1.utr5p1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 3187 4076 . - . ID=g13079.t1.exon1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 3187 3993 . - 0 ID=cds.g13079.t1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 2513 2905 . - . ID=g13079.t1.exon2;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 2513 2905 . - 0 ID=cds.g13079.t1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 2102 2281 . - . ID=g13079.t1.exon3;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 2102 2281 . - 0 ID=cds.g13079.t1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 1603 1831 . - . ID=g13079.t1.exon4;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 1603 1831 . - 0 ID=cds.g13079.t1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 745 1115 . - . ID=g13079.t1.exon5;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 745 1115 . - 2 ID=cds.g13079.t1;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . exon 174 500 . - . ID=g13079.t1.exon6;Parent=g13079.t1 NODE_414_length_24238_cov_52.7664 . CDS 174 500 . - 0 ID=cds.g13079.t1;Parent=g13079.t1;3_prime_partial=true #PROT g13079.t1 g13079 MTMNMGRAALRLSQSIRRKFGGEEYSQYKELSLGKSTNDLDLDSEDDGTGSSSSSEDEGLSPAEHASESAHHTQDKPLPEFSGVVESLRPTQKAWNFGWGKKLVQRISFRTRRGISMREAAQFDKARTAESTDSLFQVSPHIEYDRYGFETATLQSEGDSEGNASQNSATEEDLRMLKWTAFLDFADDPSAANASTMNPARLVELCNGLKKSPELSLIVRDGIPHALRARAWYVLSGGAEKCRRSDMTYNAILELCAKDTSEYQVQIEKDLLRTLPNNVFFSSLRAPGIPRLRRVLAAFCWLYPDIGYCQGMGVIAASLLLVMEEEDSFWTLASVVEDLLPQRYFSAVLLGAQVDQRVLRDFVAEKIPRMDARLQECEIELPLISLNWFLTIFSNVLSFELLLRVWDCFFNEGPIILFRVSLAMLMHEQEAILKHRDAGGIFNALSDVPGNMSNVDLLLETAFGQIKMEEWDIEVKREPHTKAILAELDDRERWSRPAERRRKPASPPPQRQAGRLFSWPGRTVRVDEKPKNVAHTEKLLALKNSIISVVRHFRMEPPADDYTDDVGEYGQIPATHRQYVRRHERQKQREDRLQQSKRPRRARAKIAYRAEAHDELGFEANEVITVVNMADDLCWLGERGQERGWFPSKFVELLDERSKDYESAGDELVTFEVTRLVRGSFCRALKAVFMHGFRSPGGMGTPNHVWDFIQEAVEDDARRENRAKVRVALCRAFKLDDDTKELSPPELLYTAVTKINASYAEGASQRDIK # ORIGINAL: g13081.t1 original gene structure, not modified by PASA NODE_414_length_24238_cov_52.7664 AUGUSTUS gene 13957 19036 . - . ID=g13081;Name=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS mRNA 13957 19036 . - . ID=g13081.t1;Parent=g13081;Name=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 19009 19036 . - . ID=g13081.t1.exon1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 19009 19036 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 18488 18653 . - . ID=g13081.t1.exon2;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 18488 18653 . - 2 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 18113 18173 . - . ID=g13081.t1.exon3;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 18113 18173 . - 1 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 17419 17715 . - . ID=g13081.t1.exon4;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 17419 17715 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 17160 17295 . - . ID=g13081.t1.exon5;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 17160 17295 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 16750 16968 . - . ID=g13081.t1.exon6;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 16750 16968 . - 2 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 16303 16442 . - . ID=g13081.t1.exon7;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 16303 16442 . - 2 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 15919 16116 . - . ID=g13081.t1.exon8;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 15919 16116 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 15426 15598 . - . ID=g13081.t1.exon9;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 15426 15598 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 14975 15136 . - . ID=g13081.t1.exon10;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 14975 15136 . - 1 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 14487 14655 . - . ID=g13081.t1.exon11;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 14487 14655 . - 1 ID=cds.g13081.t1;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS exon 13957 14190 . - . ID=g13081.t1.exon12;Parent=g13081.t1 NODE_414_length_24238_cov_52.7664 AUGUSTUS CDS 13957 14190 . - 0 ID=cds.g13081.t1;Parent=g13081.t1 #PROT g13081.t1 g13081 MAYSVGVLTVSDRCSAGTTVDKSGPALVAIVKSPPLNATTVELRVVPDNASDIQAAIREFTDAKKFNLVLTTGGTGFTPRDVTPEATTPLLDRLAPGLTHAMMAGSLQVTPMGMLSRAVAGIRGSTVVVNLPGSSKGSVECLGFILPALRHALDSVADRTDVVAAVHADLMKTGVVSAGDGASHGDGHSGHGHSHAPHDDHTHQPAPPHTHSHTHLHYEHGQCRHHEAGASGASVALRPRESTYPMVAMDAAVRTVMDNARPLEDIVVPLSRARGYATARDINAADALPPFPASVKDGYAMIAADGAGVLRVVGPVTAGQGPSYRVERGTVARITTGACVPEGADCVVQVEDTELVSTTADGSEELTIRVLKAPAVGQDIRPIGFDIREGQCVMKKGDFIGAAEVGLLAAVGVTEVPVHRRPIVAVLSTGDELVEPSMSLKHGQIRDSNRSMLVAALERADCVARDLGIASDRRDVLAKSIREGLSKADVLVTSGGVSMGELDLLKPILEQDIGATLHFGRINMKPGKPTTFATATIEGQHKLIFSLPGNPVSAMVTFYLFVIPAVRKMAGRANPELPLAQAKLTNGMRLDPRPEYARASLSWDASQGCYVSSVTGSQCSSRLLSMHSANALLVLPGRTQTTTEVAPGQMVTAILLDSVI* # PASA_UPDATE: g13083.t1, single gene model update, valid-1, status:[pasa:asmbl_7025,status:12], valid-1 NODE_414_length_24238_cov_52.7664 . gene 23534 24236 . - . ID=g13083;Name=g13083.t1 NODE_414_length_24238_cov_52.7664 . mRNA 23534 24236 . - . ID=g13083.t1;Parent=g13083;Name=g13083.t1 NODE_414_length_24238_cov_52.7664 . five_prime_UTR 24213 24236 . - . ID=g13083.t1.utr5p1;Parent=g13083.t1 NODE_414_length_24238_cov_52.7664 . exon 23534 24236 . - . ID=g13083.t1.exon1;Parent=g13083.t1 NODE_414_length_24238_cov_52.7664 . CDS 23655 24212 . - 0 ID=cds.g13083.t1;Parent=g13083.t1 NODE_414_length_24238_cov_52.7664 . three_prime_UTR 23534 23654 . - . ID=g13083.t1.utr3p1;Parent=g13083.t1 #PROT g13083.t1 g13083 MTVTSQVRYLMQPVDETILKNTLAGLSSLGAECYSKFFVPKMRTALEYRTYTPVFVFNKNPGPLAGNNTINYGVPGGYLGSEVAMIGLRDAVRRSPIGFADFDFNQFRDLLLHRETQRSDNLVVHISNADDKHFPYIPNIEGVLEETSIWLRHVAKPSKVFVVSTNGVYMASREGWTFDTGVRNL* # PASA_UPDATE: g10748.t1, single gene model update, valid-1, status:[pasa:asmbl_3601,status:12], valid-1 NODE_2136_length_7553_cov_44.1411 . gene 5795 7480 . + . ID=g10748;Name=g10748.t1 NODE_2136_length_7553_cov_44.1411 . mRNA 5795 7480 . + . ID=g10748.t1;Parent=g10748;Name=g10748.t1 NODE_2136_length_7553_cov_44.1411 . five_prime_UTR 5795 5953 . + . ID=g10748.t1.utr5p1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 5795 5967 . + . ID=g10748.t1.exon1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 5954 5967 . + 0 ID=cds.g10748.t1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 6164 6236 . + . ID=g10748.t1.exon2;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 6164 6236 . + 1 ID=cds.g10748.t1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 6470 6517 . + . ID=g10748.t1.exon3;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 6470 6517 . + 0 ID=cds.g10748.t1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 6637 6684 . + . ID=g10748.t1.exon4;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 6637 6684 . + 0 ID=cds.g10748.t1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 6908 7135 . + . ID=g10748.t1.exon5;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 6908 7135 . + 0 ID=cds.g10748.t1;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . exon 7376 7480 . + . ID=g10748.t1.exon6;Parent=g10748.t1 NODE_2136_length_7553_cov_44.1411 . CDS 7376 7480 . + 0 ID=cds.g10748.t1;Parent=g10748.t1;3_prime_partial=true #PROT g10748.t1 g10748 MTPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKSDLTTKKVVDYTTAKEFADTLGIPFLETSAKNATNVEQAFMTMAAEIKNR # ORIGINAL: g10746.t1 original gene structure, not modified by PASA NODE_2136_length_7553_cov_44.1411 AUGUSTUS gene 2 351 . + . ID=g10746;Name=g10746.t1 NODE_2136_length_7553_cov_44.1411 AUGUSTUS mRNA 2 351 . + . ID=g10746.t1;Parent=g10746;Name=g10746.t1 NODE_2136_length_7553_cov_44.1411 AUGUSTUS exon 2 351 . + . ID=g10746.t1.exon1;Parent=g10746.t1 NODE_2136_length_7553_cov_44.1411 AUGUSTUS CDS 2 351 . + 2 ID=cds.g10746.t1;Parent=g10746.t1 #PROT g10746.t1 g10746 TPPPPPPVAPAPPPPPMMGMPPPPPPPSGGGLGLIIPTSVQLKKVEVGPKQVDARTDLLSSIRNGRELRKVEAKKEEAKAEEKPKSDVASILMRRMAIEMSDSEEEDDDDNGDWD* # PASA_UPDATE: g10747.t1, single gene model update, valid-1, status:[pasa:asmbl_3600,status:3], valid-1 NODE_2136_length_7553_cov_44.1411 . gene 2999 5084 . + . ID=g10747;Name=g10747.t1 NODE_2136_length_7553_cov_44.1411 . mRNA 2999 5084 . + . ID=g10747.t1;Parent=g10747;Name=g10747.t1 NODE_2136_length_7553_cov_44.1411 . five_prime_UTR 2999 3108 . + . ID=g10747.t1.utr5p1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 2999 3211 . + . ID=g10747.t1.exon1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 3109 3211 . + 0 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 3511 3592 . + . ID=g10747.t1.exon2;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 3511 3592 . + 2 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 3690 3758 . + . ID=g10747.t1.exon3;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 3690 3758 . + 1 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 3883 3995 . + . ID=g10747.t1.exon4;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 3883 3995 . + 1 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 4155 4266 . + . ID=g10747.t1.exon5;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 4155 4266 . + 2 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 4421 4638 . + . ID=g10747.t1.exon6;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 4421 4638 . + 1 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 4734 4837 . + . ID=g10747.t1.exon7;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 4734 4837 . + 2 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . exon 4948 5084 . + . ID=g10747.t1.exon8;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . CDS 4948 5082 . + 0 ID=cds.g10747.t1;Parent=g10747.t1 NODE_2136_length_7553_cov_44.1411 . three_prime_UTR 5083 5084 . + . ID=g10747.t1.utr3p1;Parent=g10747.t1 #PROT g10747.t1 g10747 MQTKEPTLTLLLQYHWKTMATRSASHAGSWYEDSGSVLDSQLSQWLSKAAVKHAPARAIIAPHAGYSYSGPTAAHAYKQIDPTNIKRVFILGPSHHVYLSGCALTGMATYDTPLGPLVVDKEVNAELRAAGSFDTMSKSTDEDEHSIEMHLPYIKKVMERQPQFTIIPVLVGALKGDREAEYGAIFAKYLGDPKNLFVISSDFCHWGRRFDYTPTDQRFAKTHEFIEDLDRRGMSLIEQLDAKGFSDYLKAHKNTICGRHPISVLLQAITAYSNSASAAQPKLQFVAYAQSSAVTGPKDSSVSYASASMVL* # ORIGINAL: g7148.t1 original gene structure, not modified by PASA NODE_1318_length_12149_cov_39.7749 AUGUSTUS gene 11414 12149 . - . ID=g7148;Name=g7148.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS mRNA 11414 12149 . - . ID=g7148.t1;Parent=g7148;Name=g7148.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 11414 12149 . - . ID=g7148.t1.exon1;Parent=g7148.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 11414 12149 . - 1 ID=cds.g7148.t1;Parent=g7148.t1 #PROT g7148.t1 g7148 QQQQQQQQQQQQQQQQQQQQQQQQQLQGGQGGNKRKYDEIAAVGELDGSLLGRGPLVSHAHQQQLLQMGIVHQQQPGSFTGGTVHGLSADVSGYQRQRAAQLQQVQQLQLQQQQLQTPQHTRQPQPMHRQPQQQQQQQQQQQHLQQQLHQQQLQLQQLQMQKLQQQQPQPQHQQQHHHHQQQQQQQQQQQLLLLQQQQQALQRQAAMLQQFQNEALDPAHVDVGINEAIFDDLGDLDQYLNGII* # PASA_UPDATE: g7145.t1, single gene model update, valid-1, status:[pasa:asmbl_1183,status:12], valid-1 NODE_1318_length_12149_cov_39.7749 . gene 225 2642 . - . ID=g7145;Name=g7145.t1 NODE_1318_length_12149_cov_39.7749 . mRNA 225 2642 . - . ID=g7145.t1;Parent=g7145;Name=g7145.t1 NODE_1318_length_12149_cov_39.7749 . five_prime_UTR 2580 2642 . - . ID=g7145.t1.utr5p1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 2546 2642 . - . ID=g7145.t1.exon1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 2546 2579 . - 0 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 2350 2412 . - . ID=g7145.t1.exon2;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 2350 2412 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 1996 2094 . - . ID=g7145.t1.exon3;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 1996 2094 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 1724 1810 . - . ID=g7145.t1.exon4;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 1724 1810 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 1462 1536 . - . ID=g7145.t1.exon5;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 1462 1536 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 1105 1254 . - . ID=g7145.t1.exon6;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 1105 1254 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 788 844 . - . ID=g7145.t1.exon7;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 788 844 . - 2 ID=cds.g7145.t1;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . exon 225 544 . - . ID=g7145.t1.exon8;Parent=g7145.t1 NODE_1318_length_12149_cov_39.7749 . CDS 225 544 . - 2 ID=cds.g7145.t1;Parent=g7145.t1;3_prime_partial=true #PROT g7145.t1 g7145 MMHDRSTSLSGDETDDEVDPDFPFNLLTTNARAFYLQDEVPRVESLDALTFYREFVAKNRPVVITGTVTGWEAMGKWTRDYLTEVMGESPVSVAVTPTGFADAVHEGRFVLPMTVPLTLRQFFRRLSDQQSDPNSAVHYVQQQNGNFAGQFVPLSGDVPTEVSWATEALGKLPDAVNLWIGDSKSTTSMHKDPYENLYAVIRGTKTFTLVPPTDCHFVTYAKFPLAEYKLSEPSVAASSGDAAPYTKHSFTVSEHSPRSTVPWITEDPTQLGDESKLRRANILTVAVGEGEMLYL # PASA_UPDATE: g7147.t1, single gene model update, valid-1, status:[pasa:asmbl_1182,status:3], valid-1 NODE_1318_length_12149_cov_39.7749 . gene 9746 11102 . + . ID=g7147;Name=g7147.t1 NODE_1318_length_12149_cov_39.7749 . mRNA 9746 11102 . + . ID=g7147.t1;Parent=g7147;Name=g7147.t1 NODE_1318_length_12149_cov_39.7749 . five_prime_UTR 9746 9792 . + . ID=g7147.t1.utr5p1;Parent=g7147.t1 NODE_1318_length_12149_cov_39.7749 . exon 9746 9844 . + . ID=g7147.t1.exon1;Parent=g7147.t1 NODE_1318_length_12149_cov_39.7749 . CDS 9793 9844 . + 0 ID=cds.g7147.t1;Parent=g7147.t1 NODE_1318_length_12149_cov_39.7749 . exon 10317 11102 . + . ID=g7147.t1.exon2;Parent=g7147.t1 NODE_1318_length_12149_cov_39.7749 . CDS 10317 10711 . + 2 ID=cds.g7147.t1;Parent=g7147.t1 NODE_1318_length_12149_cov_39.7749 . three_prime_UTR 10712 11102 . + . ID=g7147.t1.utr3p1;Parent=g7147.t1 #PROT g7147.t1 g7147 MFAACRQLLLLRTPTVFARLPIRKMDASTATSASSSTPLLEFLIIAYDGTDPDAPTRRLAVRQQHLDRARQGKIDGSVVYGGAILGDDGAMIGSSMVVRFPTRAAFDAWLAADPYVVGNVWKAVEVRPFRLAPLPQSHPVAQRQSSNL* # ORIGINAL: g7146.t1 original gene structure, not modified by PASA NODE_1318_length_12149_cov_39.7749 AUGUSTUS gene 3346 8466 . - . ID=g7146;Name=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS mRNA 3346 8466 . - . ID=g7146.t1;Parent=g7146;Name=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 7845 8466 . - . ID=g7146.t1.exon1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 7845 8466 . - 0 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 7461 7616 . - . ID=g7146.t1.exon2;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 7461 7616 . - 2 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 6877 7101 . - . ID=g7146.t1.exon3;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 6877 7101 . - 2 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 6461 6606 . - . ID=g7146.t1.exon4;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 6461 6606 . - 2 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 6048 6142 . - . ID=g7146.t1.exon5;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 6048 6142 . - 0 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 5163 5790 . - . ID=g7146.t1.exon6;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 5163 5790 . - 1 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 4753 4911 . - . ID=g7146.t1.exon7;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 4753 4911 . - 0 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 4220 4336 . - . ID=g7146.t1.exon8;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 4220 4336 . - 0 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 3742 3881 . - . ID=g7146.t1.exon9;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 3742 3881 . - 0 ID=cds.g7146.t1;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS exon 3346 3544 . - . ID=g7146.t1.exon10;Parent=g7146.t1 NODE_1318_length_12149_cov_39.7749 AUGUSTUS CDS 3346 3544 . - 1 ID=cds.g7146.t1;Parent=g7146.t1 #PROT g7146.t1 g7146 MNPTPPFGLNPNLKYCPVVCPGGYYCPTSAQLIACPSGHYCPTGTVKPRKCSPLSLPCPEGADKQRLWTAALFTIMVPIILYASLQVLRWNQRRHWQRDRTVWHRETEERKDSLMLKAQLDERLQSKIMPMELEIASKDGTATSHRSKDDLAVSVPSPAASTANASVLDINIEFDDLGLTLPNGLTILAGVTGYVRAGTVTAIMGPSGAGKTTFLSVLSGKAVKTSGSIRINGREDRIENFKRVVGFVPQEDVMFRMLTVYENLMYSANVRLPSDWPTERRKSFVEDTVDLLGLRRVRNSIIGDEYSRGVSGGQRKRVNIGMEMVANPRVLFLDEPTSGLDSTSSLTVIAALKKIAQERNVCIATVLHQPRYEIVALFDELLLLGVGGKTVYIGSVDDVGPYFKSIGFTCPSLTNPADFYMDVIAGMVQTDGGADFDGSALFELWSDHVAARNGVEAQHLRDAQRASDAAERERRMSSSAPVSSRDVAIGMPGSAATAAANSPPPLPQNKGCCVRVSEFFASVYANLVFAFGADPSAAVRENARFHMQFYYAALRTLRLYTRNTSDVVMTLFMFFLGGTIIGIAWTGSMADIYEGLPYEIVLNYPAYMATLCPSDEIPSLIADSVMVLAVASAPAAVKSFGNYKVQYWREFSTGSSKLAYFLGVNIVDCLLITLYSLMYAAVSFFVLAPLGSFSGYYGGIFVYTFCVYGFAYFCSMLLSRESMSVTTVVLALIYAISNGAGPTKNQANDWGLGWFFEISYVFRCANALWWNEVVEYQNVYDVSYLNAETDGYDLNKYSADLGGAFLLGVFFRAIAFLSMVTRDQEKQR* # ORIGINAL: g4304.t1 original gene structure, not modified by PASA NODE_3402_length_3552_cov_30.2816 AUGUSTUS gene 76 3345 . + . ID=g4304;Name=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS mRNA 76 3345 . + . ID=g4304.t1;Parent=g4304;Name=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 76 255 . + . ID=g4304.t1.exon1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 76 255 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 492 629 . + . ID=g4304.t1.exon2;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 492 629 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 759 915 . + . ID=g4304.t1.exon3;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 759 915 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 1172 1317 . + . ID=g4304.t1.exon4;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 1172 1317 . + 2 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 1516 1597 . + . ID=g4304.t1.exon5;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 1516 1597 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 1882 1992 . + . ID=g4304.t1.exon6;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 1882 1992 . + 2 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 2186 2301 . + . ID=g4304.t1.exon7;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 2186 2301 . + 2 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 2837 2956 . + . ID=g4304.t1.exon8;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 2837 2956 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS exon 3208 3345 . + . ID=g4304.t1.exon9;Parent=g4304.t1 NODE_3402_length_3552_cov_30.2816 AUGUSTUS CDS 3208 3345 . + 0 ID=cds.g4304.t1;Parent=g4304.t1 #PROT g4304.t1 g4304 AGGLFNIGKSKAKLVNKETKIAVKFKDVAGCEEAKIEIMEFVNFLKNPQQYRELGAKIPKGAILSGPPGTGKTLLAKATAGEAGVPFLSISGSEFLEMFLGVGPARVRDLFAQARANAPCIVFIDEIDAVGRARGRGGNFGGNDERENTLNQLLVEMDGFSQNTNVVVLAGTNRLDVLDPALLRPGRFDRHIAIGAPDIKGRNSIFKVHLKVIKSDLDKSLLSRKLAALTPGFTGADIANVCNEAALIAARMGAKKVEQKHFEQAIERVIGGLEKKTKVLSPEEKKIVAYHEAGHAVAGWFLEHADPIMKLMDRMCMTLGGRVAETIFFNRITTGAQDDLSKITKMAYAQVAQLGMDDTVGPLSFEVPKEGDFAIDKPYSEDTARIIDEQVGCKC* # ORIGINAL: g13940.t1 original gene structure, not modified by PASA NODE_4005_length_2367_cov_30.7531 AUGUSTUS gene 88 2194 . - . ID=g13940;Name=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS mRNA 88 2194 . - . ID=g13940.t1;Parent=g13940;Name=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 1898 2194 . - . ID=g13940.t1.exon1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 1898 2194 . - 0 ID=cds.g13940.t1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 1450 1592 . - . ID=g13940.t1.exon2;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 1450 1592 . - 0 ID=cds.g13940.t1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 1145 1249 . - . ID=g13940.t1.exon3;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 1145 1249 . - 1 ID=cds.g13940.t1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 770 869 . - . ID=g13940.t1.exon4;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 770 869 . - 1 ID=cds.g13940.t1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 419 549 . - . ID=g13940.t1.exon5;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 419 549 . - 0 ID=cds.g13940.t1;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS exon 88 278 . - . ID=g13940.t1.exon6;Parent=g13940.t1 NODE_4005_length_2367_cov_30.7531 AUGUSTUS CDS 88 278 . - 1 ID=cds.g13940.t1;Parent=g13940.t1 #PROT g13940.t1 g13940 MASSVRRRIVHAIVTAGALGNPSARRAIPSLIAKVVAGNDATAIEQAARDASPRFGSEFRAAYDDTASLFARRIEEDSAICSRVFGVAGGELVVLVNGRIVGPLSEALSAVDVLLLKTVELEQRVRVFQPFVTELEVKNVLAEHDDTIFRSDLLMSIISTLGPPSTATHRRQRFPKMSLTHGGFELLAPNGAAMDIVAVIDPLSNVAQKLSPILSAIRDAFNVNIRVVLNPHAKLSEVPLKRYYRYVVASRPQFDSEGRHLPGPVASFTGMPTEPLLTMGIDVPQPWLVECTKTPHDLDNIHLHDAPMGVYAIYELESIIIE # PASA_UPDATE: g7321.t1, single gene model update, valid-1, status:[pasa:asmbl_7263,status:3], valid-1 NODE_437_length_23777_cov_39.344 . gene 16490 23309 . + . ID=g7321;Name=g7321.t1 NODE_437_length_23777_cov_39.344 . mRNA 16490 23309 . + . ID=g7321.t1;Parent=g7321;Name=g7321.t1 NODE_437_length_23777_cov_39.344 . five_prime_UTR 16490 16984 . + . ID=g7321.t1.utr5p1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 16490 17010 . + . ID=g7321.t1.exon1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 16985 17010 . + 0 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 17154 17465 . + . ID=g7321.t1.exon2;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 17154 17465 . + 1 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 17808 18900 . + . ID=g7321.t1.exon3;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 17808 18900 . + 1 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 19268 19390 . + . ID=g7321.t1.exon4;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 19268 19390 . + 0 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 19739 19904 . + . ID=g7321.t1.exon5;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 19739 19904 . + 0 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 20244 20451 . + . ID=g7321.t1.exon6;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 20244 20451 . + 2 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 20673 20712 . + . ID=g7321.t1.exon7;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 20673 20712 . + 1 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 21095 21152 . + . ID=g7321.t1.exon8;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 21095 21152 . + 0 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 21331 21453 . + . ID=g7321.t1.exon9;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 21331 21453 . + 2 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 21650 21817 . + . ID=g7321.t1.exon10;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 21650 21817 . + 2 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 21971 22030 . + . ID=g7321.t1.exon11;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 21971 22030 . + 2 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 22243 22451 . + . ID=g7321.t1.exon12;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 22243 22451 . + 2 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . exon 22986 23309 . + . ID=g7321.t1.exon13;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . CDS 22986 23057 . + 0 ID=cds.g7321.t1;Parent=g7321.t1 NODE_437_length_23777_cov_39.344 . three_prime_UTR 23058 23309 . + . ID=g7321.t1.utr3p1;Parent=g7321.t1 #PROT g7321.t1 g7321 MNTDNNFGGGAYGGHYPHPGMANGGLGGMQGTAGNGGYVQQMPMGHLDNSASMAPMVGPMGGPMVMGGRPGNSMGDYGSAGGVGMGELQAGWDRRSAYPPQDMYGFRNDGFVGQSMPGQMQPGMQGMQMGRGLPLNMMSGPGVTGVGMAMGTNGLMPQMGGAMSGSNGMGNKQGMGPPMSPMQQPQQQQQQQQQPSHGLAGTNNGSNGSIGSNNGSINNGSNAGAGPNMGMSVGGNNNGGSGVKSMSIPLPSMMGRGGNGGIGLQQAPQSQQQQQQQQQHQQQQPQQQQQHQHQQMQMQHQMQQGMGGQPGMGGYRMPMMSGQGGHLPPLAQMAPQGPNTPMVLTPRMSQQMGQQMGQPLTPRGGDMASHGLMGGIMGLPGHASGHDMYGSASKTPVTPREAPSSHSGQSGQAQSAQGQQSHGGQSGAPQLPAQGMLERGENPAVELVNSDLWRSFCQHTTEMIISRHGRCLFPALKIRVSGLVATDLYMILLDFVTVNDFRYKYDGQKWIEVGQADKPLPVAVFVHPESPNTGEHWMDREISFAKVKLTNKIDDAFGHIMLNTFQKYIPRFHVVRVNPPPQQPTEIKVESFQETEFIGVTAYQNEVMKEMKKNANPFARPRLAVNERGDDSDSSDGFDKRGGTRIDFETGRDEDRRSYKRRKVETRRDTSPSPPAFLADDGDYSTLPAPVNILVADDDAVTRMLMEGFLKSFGFLVTNVSNGKEAYDLLLRDDCPFHAALIDCHMPVMDGFDLLRNIVGANRPEHLKCALILMSAIGGNSYAEKAIDLGADDYLPKPVPRRLLKKRIDYYLARRFYRDNEDKMLATLDAKRAEVTQMAQSNKMVMAGIKLKDLAIMQLSSEAEHLRLRLKMQMREGDAHGQEAS* # ORIGINAL: g7318.t1 original gene structure, not modified by PASA NODE_437_length_23777_cov_39.344 AUGUSTUS gene 218 2015 . - . ID=g7318;Name=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS mRNA 218 2015 . - . ID=g7318.t1;Parent=g7318;Name=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 1813 2015 . - . ID=g7318.t1.exon1;Parent=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 1813 2015 . - 0 ID=cds.g7318.t1;Parent=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 1550 1695 . - . ID=g7318.t1.exon2;Parent=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 1550 1695 . - 1 ID=cds.g7318.t1;Parent=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 218 1359 . - . ID=g7318.t1.exon3;Parent=g7318.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 218 1359 . - 2 ID=cds.g7318.t1;Parent=g7318.t1 #PROT g7318.t1 g7318 MGGVSSYLQGFHNLDSADHDENPFGGKAAEDAHEDAVIEGFLLACRRNNAKAVAECVESEPVKFKPFRDGGVMELGILACARSCPDSYFAGDCNDSAIQFLVNRGGDVNATEFGLTALHLAARMNKPALIGHLLALGASVNAHSSSGFTAFLLAAHAGHLDALRVLRAGNADTKASVGGYNALFVACLGYATSATIDYLVGLGFLVNDLGPDHAEDDSLSHRFGVSERLSPLAAACMREGVHSPKREEDTVAVIRLLIASGAHTNDPIARPVEKAVRNGCKAVVLALLGAGADPNLRDPIGRTPIFDACERGHAGTVETLIAHGADAEATAFDDEDVCVELIESADTSECHARMLTPAMVAARNGHEAAVRALGARSVNFNAVDAHGRTALHFAASEYGRKTHGVTHCDVARAGEAGVPGEEQLPLKRLLQTMRHHGHTHCRICTQIDAYEKTCLALLEYHADPKRKDAAGKSPLDVATPSCRLVLESFVFADDQP* # ORIGINAL: g7320.t1 original gene structure, not modified by PASA NODE_437_length_23777_cov_39.344 AUGUSTUS gene 12896 15526 . - . ID=g7320;Name=g7320.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS mRNA 12896 15526 . - . ID=g7320.t1;Parent=g7320;Name=g7320.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 12896 15526 . - . ID=g7320.t1.exon1;Parent=g7320.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 12896 15526 . - 0 ID=cds.g7320.t1;Parent=g7320.t1 #PROT g7320.t1 g7320 MDDILKRADEARRKAQEDAVHYEVFAADALAGPVTDAALETVAIACMSSVIDMLRGYIWHKDDFRLAVSRMHGHSMSSAPGVRSSVGVDANGTNDDAIPRLAGVTRFGDNIEDEWFVVHLLLAITRANTSLVARVWDADGEFLLIEGADHLPGWLDPEASENRVFLAGGHVHLLPLPSAPGDIAILPVGRPSLQQAVLAVACHPHKTRASSPIENAVLARIGTDARRHAMQHHYSNCRLPRATAALLRASPESIAPAAEAFYLRDPITFRACQSLRRVMPPGTDFVTCRVRFTRAIYAMLKCQRFNFPPSFGRPPPRSSPEYAAWEMGAKIACGFEMLLVEAERARISRSVVESEDANNLERAKAHPLWKNYAESLRGRGYFRDEMEGSRLHRELMSAAADDFIASYVDSVRVQVGNATAPQSPGDIGRRTTKDVWAAPGEIVLRFYESICASVKGDVVAGDTLPSPSQQKQQQQQEQQQDDVLSDDTTQLLPSDSDAWMEMTVDDLEAMASERSGIMRDAEKQHAEHKSKSRSDGTTAADDEFDLTNVADKLRSFLGKVSSHEGVVFPGQPTSAAEGLDSDDEYVDATSTHTTSKPPHSESNKNSMNSSNNSNSTGEKSARGTGRHDHAVRKSASDTSLSSVGFDSRAFVKTMRTVLGMDADSDSDSDADSESQGRVSDMDDLFGEGALLGRGFSDLDSDGDDSSDGESDAFVASGEGDDGRQARQLEQGMKRIAHLSRAMDAELAANSTLGASFARMEDDHGDDDDREPLERPREAKGASNGAGAGTAGHRAPATATEGDAPSSRGDLGDRSDRSDRGAAMRGIDIDVNLVKNILDSFAAQHGMAGPVSNLLGSMGIRVPDDAASPGSQNAGKR* # PASA_UPDATE: g7322.t1, single gene model update, valid-1, status:[pasa:asmbl_7262,status:12], valid-1 NODE_437_length_23777_cov_39.344 . gene 23401 23701 . - . ID=g7322;Name=g7322.t1 NODE_437_length_23777_cov_39.344 . mRNA 23401 23701 . - . ID=g7322.t1;Parent=g7322;Name=g7322.t1 NODE_437_length_23777_cov_39.344 . exon 23401 23701 . - . ID=g7322.t1.exon1;Parent=g7322.t1 NODE_437_length_23777_cov_39.344 . CDS 23465 23701 . - 0 ID=cds.g7322.t1;Parent=g7322.t1 NODE_437_length_23777_cov_39.344 . three_prime_UTR 23401 23464 . - . ID=g7322.t1.utr3p1;Parent=g7322.t1 #PROT g7322.t1 g7322 MPLTPVPAAVAIPDVGCELCTARVAIQGKYLDQINDLYTDFHVVKLPLLTHEVRGSDRIKEFSHYLCEPYSTKRPGDI* # ORIGINAL: g7319.t1 original gene structure, not modified by PASA NODE_437_length_23777_cov_39.344 AUGUSTUS gene 2735 11823 . + . ID=g7319;Name=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS mRNA 2735 11823 . + . ID=g7319.t1;Parent=g7319;Name=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 2735 2866 . + . ID=g7319.t1.exon1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 2735 2866 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 3057 3151 . + . ID=g7319.t1.exon2;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 3057 3151 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 3257 3355 . + . ID=g7319.t1.exon3;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 3257 3355 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 3576 3705 . + . ID=g7319.t1.exon4;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 3576 3705 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 4030 4157 . + . ID=g7319.t1.exon5;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 4030 4157 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 4333 4435 . + . ID=g7319.t1.exon6;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 4333 4435 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 4873 4950 . + . ID=g7319.t1.exon7;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 4873 4950 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 5175 5248 . + . ID=g7319.t1.exon8;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 5175 5248 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 5477 5649 . + . ID=g7319.t1.exon9;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 5477 5649 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 6144 6242 . + . ID=g7319.t1.exon10;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 6144 6242 . + 2 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 6467 6575 . + . ID=g7319.t1.exon11;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 6467 6575 . + 2 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 6831 6912 . + . ID=g7319.t1.exon12;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 6831 6912 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 7177 7302 . + . ID=g7319.t1.exon13;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 7177 7302 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 7679 7753 . + . ID=g7319.t1.exon14;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 7679 7753 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 8025 8186 . + . ID=g7319.t1.exon15;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 8025 8186 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 8367 8501 . + . ID=g7319.t1.exon16;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 8367 8501 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 8632 8775 . + . ID=g7319.t1.exon17;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 8632 8775 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 8954 9285 . + . ID=g7319.t1.exon18;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 8954 9285 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 9460 9625 . + . ID=g7319.t1.exon19;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 9460 9625 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 9867 10043 . + . ID=g7319.t1.exon20;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 9867 10043 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 10264 10403 . + . ID=g7319.t1.exon21;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 10264 10403 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 10648 10772 . + . ID=g7319.t1.exon22;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 10648 10772 . + 1 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 11033 11403 . + . ID=g7319.t1.exon23;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 11033 11403 . + 2 ID=cds.g7319.t1;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS exon 11725 11823 . + . ID=g7319.t1.exon24;Parent=g7319.t1 NODE_437_length_23777_cov_39.344 AUGUSTUS CDS 11725 11823 . + 0 ID=cds.g7319.t1;Parent=g7319.t1 #PROT g7319.t1 g7319 MSQYASGASQDLRFIPGDYDGGVSHTQASDYSGYYYNDGDAYSQSQLSQRQYPEHAAGGPDGRRRWSDRDEGRDAGEDDLAESVAELNVDENDEEDGAFQKNLPDHACSHCGIHSASSVVQCLGCKKWFCNSRLSTSASHIVNHLVRSKHKEVVLHKDSPLGDTVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQGSIRDMDWDLSQWQPILDDHAFLSWLVKVPSEHEQLRARQVTANQIQRMEDVWKANPTAKLDDLEKPGVDEDPNPVLTKYEDAYQYQNVFGPLVKLESDYDKAVKEAQTQANIVVRWDMGLNKKRIAYFNFPRQDGEYKLMAGDELRLRYNGELHRPWEGIGHVIHVPGNFGEEVGLELRSNAGVPIECTHNFTIDFVWKATSFDRMQAALKTFAVDDKSVSGYLYHVLLGHDVEPQTLKTTVPKKLSVPNLPELNGSQLAAVKTVLQRPLSLIQGPPGTGKTVTSATLVYHLVHQNQGQVLVCAPSNIAVDQLTEKIHRSGLKVVRVAAKSREAIDSSVSFLALHNQARDSFCVRNSNYGNGELSKLIQLKDELNELSSSDEKRFKMLKRACERELLKAADVICCTCVGAGDPRLSKFRFKTVLIDESTQATEPECVIPIVNGAKQVVLVGDHCQLGPVVMCKKSAKAGLAQSLFERLVNLGIRPIRLEIQYRMHPCLSQFPSNTFYEGSLQNGVTAGERLQPSVDFPWPRPQAPMFFASTTGHEEISSSGTSYLNRSEAQFVEKAVTRFLRANVKPDQIGVITPYEGQRAYILQYMQLHGQLRAQLYQAVEVASVDAFQGREKDYIILSCVRSNTNQGIGFLGDPRRLNVALTRARYGLIIVGNPKVLSKQPLWYSLLSHFKEAEVLVEGTLSNLKPSMVQLVKPRRAFARNQQGNRPADDDRDYVRDYDRNSRGRGDKYDKDYDRNIPLGASGAPAEDKSSRADKPPTGAGFDFYASHDPLGYIGAERAAASQAMRGHSMPVPVGVFAAAYTQSQGSLYTQQSQSQSQSQSQSQQAGASQREHGGVSGRPGQKAEGPYGAQAGSSRFGGMSQTSIGGGFSQDSYADDYHSQTDAGLSQDYYGRGHSQTSYTNY* # PASA_UPDATE: g10619.t1, single gene model update, valid-1, status:[pasa:asmbl_1752,status:3], valid-1 NODE_148_length_34671_cov_41.8663 . gene 15823 19858 . - . ID=g10619;Name=g10619.t1 NODE_148_length_34671_cov_41.8663 . mRNA 15823 19858 . - . ID=g10619.t1;Parent=g10619;Name=g10619.t1 NODE_148_length_34671_cov_41.8663 . five_prime_UTR 19499 19858 . - . ID=g10619.t1.utr5p1;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . exon 19026 19858 . - . ID=g10619.t1.exon1;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . CDS 19026 19498 . - 0 ID=cds.g10619.t1;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . exon 18778 18853 . - . ID=g10619.t1.exon2;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . CDS 18778 18853 . - 1 ID=cds.g10619.t1;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . exon 15823 18568 . - . ID=g10619.t1.exon3;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . CDS 15968 18568 . - 0 ID=cds.g10619.t1;Parent=g10619.t1 NODE_148_length_34671_cov_41.8663 . three_prime_UTR 15823 15967 . - . ID=g10619.t1.utr3p1;Parent=g10619.t1 #PROT g10619.t1 g10619 MDAKKSSTMHAFEFTVASVDDAEGDGLSVPVTSPTAFSATSAASATSLPPSLCGRGIGPLPVTNSVSGRLSASSLIGSSPESLVKPCALIGFFAVVGLPNSAADLEPCESPAGAEEVPPLLAAYEARELQRFPAPTGSEEDIVDGSSVCQFCFPAGMRFRRGGRDGGSLGPASHSFIMTQHNGDRLYGSCLIFYEPIDNDDILGALGMLEDMYAITHPEAPLHPSQSVKKGPIYAPKCICIMSRHSFFGAFDAYLRQLHTNAVRSPTVKLAKHLPQPEACIRNLLFEVPTPRRGNGVRFYCPTPTAAPVALDVGRPSMRDLPHLDHQFIDLFDLLDLDNVLILFRCLLAERRIVLLTTRPERLVPTAECLLAMMYPFCWCYVYAPVLPRSLLHVLDSPVPYVVGICTDEPPRPTAPPANPHLRRLERQGSKSLLPQSSTNSSSNSPTPPTRDGRHRGSIFEDGSYHESNAASVTMAGGETFQFPPDAVLVDLDRNNIRVSESIPRLPGPEFRLLVEQLSDCIVKARTHPRNFDTDWPNRAFRAAFLRFFLNVFRGYAAYVASGQSRDSSGLFIPVSGDEDDDSAHPSPASVRWAPPEPLKNRRMSGAISPLPSRKRTDSPIPSEDTGDGFINGAFDSLAFMCDQPEANRTFLASFLATQTFANFIGEKTHALEGEPQQAVQYFDAVVAGRIQFSTDGLTGSTVFDNHNTYVCPVPAPPPASDPAEGGDRMASAGDDSDSDDSQSSFGDDDFPTWPMLMVEEIRAVPDTGILRDSDAAIQKFLSVESSPGIAQQLRWNSWNNIAQESAQKAAIPHDSLGLGITHAATRESLLASLASIARGLVACNGDPLSSSHGSQSSALSLSRTTSVVAADTDISVASDPVAAFPMQSDVLVARMCLVLERIWSHGLKGSTVTAAASDFWQFLNSVPDPMEQLSREDEMNPRRLRAVCAKEDVWVISRHTALKTDLGRGRAWVRLALEKRRLSDHLGAIVEGNTALLEQYYGEQAFLRSRDMIEAMLQQLAIIDQLGLSLFSDNYAADPDFDSELSMM* # ORIGINAL: g10615.t1 original gene structure, not modified by PASA NODE_148_length_34671_cov_41.8663 AUGUSTUS gene 77 764 . + . ID=g10615;Name=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS mRNA 77 764 . + . ID=g10615.t1;Parent=g10615;Name=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS exon 77 181 . + . ID=g10615.t1.exon1;Parent=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS CDS 77 181 . + 2 ID=cds.g10615.t1;Parent=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS exon 359 457 . + . ID=g10615.t1.exon2;Parent=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS CDS 359 457 . + 2 ID=cds.g10615.t1;Parent=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS exon 646 764 . + . ID=g10615.t1.exon3;Parent=g10615.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS CDS 646 764 . + 2 ID=cds.g10615.t1;Parent=g10615.t1 #PROT g10615.t1 g10615 PFSRGSAHTHGVRVRQQRDLRFIKTGLDCSLKSSMMSAFGLSSPILIRRTSSASSHLPFSSTQMKLITWRTAVPWSTALRRSSWSSTSQTNCHLSLKTSAGSSRSRF # PASA_UPDATE: g10620.t1, single gene model update, valid-1, status:[pasa:asmbl_1753,status:12], valid-1 NODE_148_length_34671_cov_41.8663 . gene 20466 26110 . - . ID=g10620;Name=g10620.t1 NODE_148_length_34671_cov_41.8663 . mRNA 20466 26110 . - . ID=g10620.t1;Parent=g10620;Name=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 25925 26110 . - . ID=g10620.t1.exon1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 25925 26110 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 25000 25725 . - . ID=g10620.t1.exon2;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 25000 25725 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 24461 24652 . - . ID=g10620.t1.exon3;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 24461 24652 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 23911 24222 . - . ID=g10620.t1.exon4;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 23911 24222 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 23192 23623 . - . ID=g10620.t1.exon5;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 23192 23623 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 22749 22949 . - . ID=g10620.t1.exon6;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 22749 22949 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 22479 22623 . - . ID=g10620.t1.exon7;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 22479 22623 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 22185 22270 . - . ID=g10620.t1.exon8;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 22185 22270 . - 2 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 21881 21956 . - . ID=g10620.t1.exon9;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 21881 21956 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 21301 21485 . - . ID=g10620.t1.exon10;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 21301 21485 . - 2 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . exon 20466 21039 . - . ID=g10620.t1.exon11;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . CDS 20704 21039 . - 0 ID=cds.g10620.t1;Parent=g10620.t1 NODE_148_length_34671_cov_41.8663 . three_prime_UTR 20466 20703 . - . ID=g10620.t1.utr3p1;Parent=g10620.t1 #PROT g10620.t1 g10620 MAQSSQQPAELASLAARILLLPDVPNRRDILACRETVRKTLEEAMNYDGRKENMAAGALYEKTLSLADELARMVASAVTSTTHSGQRATLAEVSAELAKYRKMALDRNVALQRQKTRTPSTAPTATPKASGSTGAGETAGVRSPVRQSSQPASRSPSRPPSRPPSRPPSPPPPHAQTQTQTQNRSHGAGPSSVPTDDSCAQYSYAGGRHPPPQPPAAAWTENANTVAAPHADHSNPPRVLLRQDSLPGNMRPPPAAPQSAPVNHMTPGVGCPSVEGHVSSADASSEGHRASTGGHMEIQPSSAAVTTSSVNRRTSQSPTKSQWKPSGNASALKGVKSASAVPVQRRSTGSFPARPGVAVQHASPTQQQPKSVLTRQLSLDLPLGSGIQGVGAPSAEPCAVVASTQAVEGHVTETVALSASSSEPSLASSAAPNKDDTVVNGAVLPGHVRTAVVATAHDKRPRSSQPASRASKIQGSLVAFNARRRASSAGAVSTPSVRQLTSASVQTPPLSNTPSCETLSETGSDSSGPYGVAATRSRGSSAASNSPREMTPHDGAPPLLPDTVRRETSSAASGAVSATRGRPVHVTPKSGAPSSKVSKAETKIDTTRPATPRSTKPFDSPQRALSPQRMSAANSQNLSLIRQMSGDVSSTALISRKNRRILRGFDQKLVDTIESQIIDHAAQLTFDDITGLEDAKQALTEMVILPARRPELFTGLRTPEKGLLLFGPPGNGKTMLAKAVASEADAVFFNISASSLTSKWVGESEKLVQALFALARDKHRAIIFIDEIDSILRIRNTNEHEATRRLKTEFLIAFDGVGSSTSDKIVVMAATNRPWELDEAALRRFPKRIYVPSPSVETRYDMLRKLLVKQKNELTHADYVYIADSTEGYSFSDLTALAKDAAFGPLRELGSSIVNVSAEKIRPIRLQDFQKSLQKIRPSNDVGTSEVEKWRRDKASLE* # PASA_UPDATE: g10621.t1, single gene model update, valid-1, status:[pasa:asmbl_1755,status:3], valid-1 NODE_148_length_34671_cov_41.8663 . gene 27318 34556 . - . ID=g10621;Name=g10621.t1 NODE_148_length_34671_cov_41.8663 . mRNA 27318 34556 . - . ID=g10621.t1;Parent=g10621;Name=g10621.t1 NODE_148_length_34671_cov_41.8663 . five_prime_UTR 34432 34556 . - . ID=g10621.t1.utr5p1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 34189 34556 . - . ID=g10621.t1.exon1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 34189 34431 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 33855 34090 . - . ID=g10621.t1.exon2;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 33855 34090 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 33176 33308 . - . ID=g10621.t1.exon3;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 33176 33308 . - 1 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 32893 32988 . - . ID=g10621.t1.exon4;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 32893 32988 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 32520 32684 . - . ID=g10621.t1.exon5;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 32520 32684 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 31892 32209 . - . ID=g10621.t1.exon6;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 31892 32209 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 31475 31699 . - . ID=g10621.t1.exon7;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 31475 31699 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 30938 31207 . - . ID=g10621.t1.exon8;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 30938 31207 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 30593 30748 . - . ID=g10621.t1.exon9;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 30593 30748 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 30224 30347 . - . ID=g10621.t1.exon10;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 30224 30347 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 29793 29947 . - . ID=g10621.t1.exon11;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 29793 29947 . - 2 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 29598 29698 . - . ID=g10621.t1.exon12;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 29598 29698 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 29257 29377 . - . ID=g10621.t1.exon13;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 29257 29377 . - 1 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 28800 29017 . - . ID=g10621.t1.exon14;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 28800 29017 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 28456 28582 . - . ID=g10621.t1.exon15;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 28456 28582 . - 1 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 28115 28293 . - . ID=g10621.t1.exon16;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 28115 28293 . - 0 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . exon 27318 27861 . - . ID=g10621.t1.exon17;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . CDS 27474 27861 . - 1 ID=cds.g10621.t1;Parent=g10621.t1 NODE_148_length_34671_cov_41.8663 . three_prime_UTR 27318 27473 . - . ID=g10621.t1.utr3p1;Parent=g10621.t1 #PROT g10621.t1 g10621 MAHESNHVSALDGISESACPTLNGSSVRVAPTRSPSCLASAFASLASANPTLPALIGNSAFKALSVDASSPFGSDEECLNLMRAYFSAQKAMLDVRDYLKRIAVSPLVEEVPLAVGSAAQLEYLATAERAAMEAHSLALDLIRAKIEAHYFDGCKILAPRIVRISEEYDMSEKEMMALATIVFANSDTFVFTLEGGDRISSFLETLRVYCQMTMSEGLRFIDKKRRYAKESIVCIEEQDSPVRYMPQMPGHMIAVVLGGEMSTENKLKIDGTGLYAVLQKEDPNADQLADRPTSSDDVKSPEDGTPEPELKGDRDEETNIADLLRGVREEEEGRPDLEAPSMTPTVPTDNEELTPYTNNLAYLSDHFDWICLTLRVHACKKEVQEERYSRDVRVEQQLRELSAKLKGARQRCVRRMDMTRASASGWLPRLERLFKILGLDEFEKLVLYTLVGNKLSSRISPDMSYYGSSSSMVSIFYVGQLVHLFSESFEQEVMHRKYFYKNATLIREGVIQLSDSGFGGELMNTTVEVDRRMLDFIVGLDTEFNELVEGGHLYSPSVKLDQVVMNDDQKALVVETVTYFDKFEKMRRRLGFEDVISYGNGMVLLLFGQSGTGKTMLANALANKLGKKVLLINYPSLGSQADLVIKFIFREAKLTDAILFFDEAEAMFKSRDIAMNGGLNLLLTEIERHKGLIIMATNRAYDLDESMHRRVTLAIEFRLPDPNLREKIWRAHVPDTGLFAENIDWRYISIKYELTGGFIKNAMLAALSSAVSRGEKEGTDKVLITQEDVEKGAINQLRGRLAMVEFDRRVVPVAGLDGLVLATDVCRRLAEIVRFEKARQILIGEWGFGEALCRDQGTTVLLHGPPGVGKTVAAEAIGFETGKPLKIVNYAELVSKYVGDTGKNIEKVFSEAKALDVVLVFDEAEGLFSARTKDNSSSTDRYANVDTGLLLYHMERFPGIVILCTNLIDGIDPAFFRRFRFIVEFKLPDAEMRRRLWDKHLPSQAPRSADVDLAALGERFTFSGGHIKNACFKAASRAALRDPNPTDPKSPGRIIAMDDLVDCATEEDALLHGRRSTAAAHMFN* # ORIGINAL: g10616.t1 original gene structure, not modified by PASA NODE_148_length_34671_cov_41.8663 AUGUSTUS gene 1269 2264 . + . ID=g10616;Name=g10616.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS mRNA 1269 2264 . + . ID=g10616.t1;Parent=g10616;Name=g10616.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS exon 1269 2264 . + . ID=g10616.t1.exon1;Parent=g10616.t1 NODE_148_length_34671_cov_41.8663 AUGUSTUS CDS 1269 2264 . + 0 ID=cds.g10616.t1;Parent=g10616.t1 #PROT g10616.t1 g10616 MQGDRFDGVLLAMAQQHNGAEDIIDTFFDFLSRKTDFFQAADPKMAEDIVMRKFREHRRKAEKRRADDEGAPAPKPKAAAPVAQPAPQAAVPAVTPPAVTPPTAVAATPATLPTSGEKSAEQKSDAMEVSQGDDSGEEPKKEGGEAEEEEEDPADKGKMKPNEGNGADLDKYRWTQTLGDVELRIPVDVPFRIKSKDVVISIGNTHLKVGLKGHPAIIDAEMHARVKKDDSFWTVDDGKAIVVNLQKVNQMEWWPRIVVTDPEIATRKVQPENSKLSDLDGETRSMVEKMMYDQRQKQMGLPTSEEQKKQDMLQKFMSQHPEMDFSKAKFA* # PASA_UPDATE: g10618.t1, single gene model update, valid-1, status:[pasa:asmbl_1748,status:12],[pasa:asmbl_1750,status:12], valid-1 NODE_148_length_34671_cov_41.8663 . gene 6829 14942 . + . ID=g10618;Name=g10618.t1 NODE_148_length_34671_cov_41.8663 . mRNA 6829 14942 . + . ID=g10618.t1;Parent=g10618;Name=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 6829 6900 . + . ID=g10618.t1.exon1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 6829 6900 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 7446 7685 . + . ID=g10618.t1.exon2;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 7446 7685 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 7901 9477 . + . ID=g10618.t1.exon3;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 7901 9477 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 10038 11064 . + . ID=g10618.t1.exon4;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 10038 11064 . + 1 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 11478 11849 . + . ID=g10618.t1.exon5;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 11478 11849 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 12163 12372 . + . ID=g10618.t1.exon6;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 12163 12372 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 12583 12759 . + . ID=g10618.t1.exon7;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 12583 12759 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 13171 13350 . + . ID=g10618.t1.exon8;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 13171 13350 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 13781 13864 . + . ID=g10618.t1.exon9;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 13781 13864 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 14230 14372 . + . ID=g10618.t1.exon10;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 14230 14372 . + 0 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . exon 14540 14942 . + . ID=g10618.t1.exon11;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . CDS 14540 14711 . + 1 ID=cds.g10618.t1;Parent=g10618.t1 NODE_148_length_34671_cov_41.8663 . three_prime_UTR 14712 14942 . + . ID=g10618.t1.utr3p1;Parent=g10618.t1 #PROT g10618.t1 g10618 MRATFASSLIAFLLVFSARVRSVQAHGTLTFTLDSGQVSTDTCTPSTSCDLYILQVLVTYPTNGVTTTCQDNGGSASATMGVVGNFNFKKPVACQMAVTTTTVSDFTVRASVADYNVDTADRALPWSSLVTVKPATAIGTKITLLVSSSFSLFGSLTMTCSAGYYGTLCDVACDAAVTCNGRGTCSNTGCVCLSGFVGATCNQCAPMYFGPNCAGRCLLCASCSEGLLGTGACLTCPPGKYGLKCDSTCACASNATCSTGISGTGVCSACPTNYYGPTCTNACNCNGGTCRDGISGNGQCLTCPTGRYGANCQNTCSCAGGTCRDGPSGNGDCTSCGLPGYYGVKCTLCNCNGGLCQDGATGSGACLTCLPSRYGPSCASTCNCNGGLCQDGPTGSGTCTSCVVNRYGANCASVCSCNGGTCQDGPNGSGTCTSCPLNHYGANCGNVCSCGGGTCQEGPNGSGTCTSCPKNYYGQNCANQCPCNGGSCQDGPTGSGTCTSCPKNYYGQNCANQCPCNGGTCLEGPTGSGTCVTCLPNYYGANCANTCPCNGGSCQEGPNGSGTCTSCPKNYYGKNCLSACACSTGSSCSEGPNGNGACSGCSAGRYGATCSGICDCNGGTCSEGPSGTGAYWEFTYSTAVQSQVIVTVTGASTNVLGCQVATNNYIINLVRFSRDQRVLKPQASLDSPRGLNFLNGSSPLSYFHIVRDACVPNVGVIVSSQLGDRQFYLTQSDFLYTNVFGIEPTRLVVPSGMNASTAAILVTTGFARSGVAIVAMSGVYISVNSTLVLAGGLPVPTTAAAVNHIASSSQCFPNPVAGDITINTDSYFLAWNEGVSQQNIFLSTNGGFNFSAIALPSRATSGGKIHCAGVHKTRPTFYVLIEDSGGVVAFNEYSFRSSSWLPTGIPMGNAASGIGGSYSCALHRDGSGQIYVWGGGLWASPNGGVSLATLTLITRDPQRPAPGLASGEVVREFTSSPDGQFAVITTLNRVFYGKNGLATAHEVQSGLLPDVLATIDFDGVRRLRVLTPSADGMSVTSRPLPVTNEITSPRAVQPTLTCPILQQTDNQQSIVYLDVNGVHSFYVSLISSSGFSNALSLQVADSDLLAFSLNASTPASTLSVLRNVTVNVFERDLTSSFASRLANGTGATAIRTIATEATAACDTVMKVSRCVVGCPPGRHIRVAQSAYFQKDCENFKSGYGFSVRGSGYNRELYWSSREVGTSDKGEFTYDYSTFGCPFTVFYEDDFKVALELWDGDVLVGPMTANYVIYDTNGRFGFKYNSTDADALCSQKSQHWYDVVNDFGLDPRKAWSPSNYVDCHGKGGAPIDGGQYHILNSSFNGLTWSSDGIFTMTIRVVDPTYSYCDLVTHVGVKVYGAPLDVVPGVLVVMGVTLGIMLVLVASYFVFWRQQRVPGPKDD* # PASA_UPDATE: g10617.t1, single gene model update, valid-1, status:[pasa:asmbl_1751,status:3], valid-1 NODE_148_length_34671_cov_41.8663 . gene 2378 5255 . - . ID=g10617;Name=g10617.t1 NODE_148_length_34671_cov_41.8663 . mRNA 2378 5255 . - . ID=g10617.t1;Parent=g10617;Name=g10617.t1 NODE_148_length_34671_cov_41.8663 . five_prime_UTR 5153 5255 . - . ID=g10617.t1.utr5p1;Parent=g10617.t1 NODE_148_length_34671_cov_41.8663 . exon 3521 5255 . - . ID=g10617.t1.exon1;Parent=g10617.t1 NODE_148_length_34671_cov_41.8663 . CDS 3521 5152 . - 0 ID=cds.g10617.t1;Parent=g10617.t1 NODE_148_length_34671_cov_41.8663 . exon 2378 2949 . - . ID=g10617.t1.exon2;Parent=g10617.t1 NODE_148_length_34671_cov_41.8663 . CDS 2611 2949 . - 0 ID=cds.g10617.t1;Parent=g10617.t1 NODE_148_length_34671_cov_41.8663 . three_prime_UTR 2378 2610 . - . ID=g10617.t1.utr3p1;Parent=g10617.t1 #PROT g10617.t1 g10617 MASAMRGLGGRRLARALPFVRLNHLAPRTSPFVFSRSFNSSTASTGASGSAFFSSWTARVYAATGAAALSGIGAYGIAKLFNGESNVAHAEEVVSQAALNRAGRRRPDLRDIHADEVAQHKTSASGMWVIYKEGVYDVTQFVEQHPGGKRILMAVGGSIEPFWKIYTVHATEETIDILESMRVGNLHADDFAKQAAVVAADSNDPYAQEPERHPALVVMQKQPFNGETPAELLVDKFITPNGLFFVRNHLPVPAIDEKSYALEIDPGHGKPPIRLTLSDIKRKFPKHHVVASLQCTGNRRKDMNSVKKTKGLEWTSGAMSNAEWAGAKLRDVLRYAGVGDDYEKIGVEHIQFEGADKDAEAPYGASIPVSTAMRVDGDVILAYEMNGVPLPRDHGFPIRVLVPGTSGARNVKWLTKIVASSDESQSFWQQKDYKSFSPSVDWDNVEQFIRDAPAVQELPVQSAICVPPADTLLEEGTEYITMKGYAYSGGGRGIIRVDVSVDGGKSWFTANLNKGGIEQKHNRGWAWALWEADVPLPKERPCGEFDLCCKAVDSSYNTQPDTIAPEWNLRGILTNAWHRVHVQVECSEAQRKMLEDMRIAMCKQLTETTCALPERTPKAAAAPTPTPTPAPAPKATTPSPPTAPAQAKGGKTAAAV* # ORIGINAL: g3587.t1 original gene structure, not modified by PASA NODE_2594_length_5760_cov_38.8127 AUGUSTUS gene 106 5423 . - . ID=g3587;Name=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS mRNA 106 5423 . - . ID=g3587.t1;Parent=g3587;Name=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 5225 5423 . - . ID=g3587.t1.exon1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 5225 5423 . - 0 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 3684 4949 . - . ID=g3587.t1.exon2;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 3684 4949 . - 2 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 3230 3441 . - . ID=g3587.t1.exon3;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 3230 3441 . - 2 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 2918 2979 . - . ID=g3587.t1.exon4;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 2918 2979 . - 0 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 1756 2639 . - . ID=g3587.t1.exon5;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 1756 2639 . - 1 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 923 1505 . - . ID=g3587.t1.exon6;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 923 1505 . - 2 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 574 646 . - . ID=g3587.t1.exon7;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 574 646 . - 1 ID=cds.g3587.t1;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS exon 106 192 . - . ID=g3587.t1.exon8;Parent=g3587.t1 NODE_2594_length_5760_cov_38.8127 AUGUSTUS CDS 106 192 . - 0 ID=cds.g3587.t1;Parent=g3587.t1 #PROT g3587.t1 g3587 MSALKPSRVVRVGSLLNALVALCILGHLSSMTTHADASLVAGSGGYALLFDGVDDFVNMGPLLDISDAFTISYWVDVCTSADRQTHLSKVLTSTGTTLFEISFDNSRLSIFWATGSWSALPKYTGPHQYAFSVQPFNNGSTVRAYVDGVLAAETNTTTPINALPNAAAADMPWILAGRVRRIRQGALRERFLCGLFDEVRVFSTARTPAEIASDYRIVIGDEDLATAPYSTTLKAYWSFDDPYDRSASLSLARGRGSGRPIALLSDGLYDEMPRYSPSTLPIAGSGGAFSGKVDADVAVRLCGLVSPTCTGNTCDQFVFVLASPLSIGSVYAADASSGVRVPGAANLGSTINATLAIANGTSASSQAYICANVAVAGRVGEIGDPYSRLGYRVCRANWTLSSVGTDCSTNTAWIDASFRDNSVPIAGKAYAVRFNGYDNYLSAADFDAGMSLTVELWLKLDSPRMFQAIVGKHFADGRNMFILGIYGGGLQINVFDTTTTWLGIVLDTRLRHLAVQLVSVNNNTNTRVTVFDNAVLVHQDTLSVAMRSMSGGLPWSIGQEYDGSPRGPVPSDFLSGYVDEVRIWTEARTSGQIAASMNSLILPRAEPNLAFYFRLDEGQGTVATNLGSTGGTASLVGTADADRTNNIYTPSPFSIPGSNATLRVKEGSTTNLTLPITDTDDSHTGVTLTLGTTQGTLNYYANRSTVSVGDTVSAGSVITYTTTRGIGSRSDSLAYRVWDYRNASRNTAHLFIDIQREGPKIVAFQGYGTEGALYLDVTFSEDTNRPAVASKASLDAVVVFTPPLKYESYVGRWASARTLSVALLDSSLFVPALLPVFGAQTVAVRASGLLRDAAQTSWPSDATSGTLTGAWGTSGSSSVPTFVIPLVVCLGVLCIVVIIAGAVYIRRKSRDVSNVLMNRIDFNELTDMAVIASGGFGEVLKARFRGSDVAVKRLLTKPGDSASASKARSNGGTARSLSQGSGDESGTKMKSAFVMDTHNKMQSTMKRTAMRGENGRNSAREVGGSGGSNRRRMFGFMRTVGGWLQRSRPHDTHSEAEIAEFRQEMNIMCSLRHPNIVLYMGCCETPYHCIVQEFLHKGSVFDALAKGDPELTLQRRIGIAM* # ORIGINAL: g10160.t1 original gene structure, not modified by PASA NODE_3346_length_3678_cov_35.7388 AUGUSTUS gene 554 3523 . - . ID=g10160;Name=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS mRNA 554 3523 . - . ID=g10160.t1;Parent=g10160;Name=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 3420 3523 . - . ID=g10160.t1.exon1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 3420 3523 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 2877 3000 . - . ID=g10160.t1.exon2;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 2877 3000 . - 1 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 2180 2320 . - . ID=g10160.t1.exon3;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 2180 2320 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 1843 2007 . - . ID=g10160.t1.exon4;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 1843 2007 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 1438 1614 . - . ID=g10160.t1.exon5;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 1438 1614 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 1102 1272 . - . ID=g10160.t1.exon6;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 1102 1272 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS exon 554 847 . - . ID=g10160.t1.exon7;Parent=g10160.t1 NODE_3346_length_3678_cov_35.7388 AUGUSTUS CDS 554 847 . - 0 ID=cds.g10160.t1;Parent=g10160.t1 #PROT g10160.t1 g10160 MATAVLQSVANDNLNVRIRGSWALGNLCESLVAARESSKSGADAASDDDIPTALMLQLSKAALVCAKDNDKASEAKVRSNAVRALGNLMRLTNAEFLRTSDGRSLVGEMGDALVKCVKTGPVKLRWNSCYAIGNAFRNSQLCTAAARRPHEHANARGTWPQIAVDALVGVASDSKNFKVRINAVGALRIPARRDEYGVATAPDALAGVALGLVAAFSSAEAVDDFAEFKYQQTLQDQLGATLCHVIGVSGPADRVPLARMLSSRGDDLIRLLDRHIARTESGALVLSGADTNVEADGDDDVEVASTAAHPNHSGDVTQDPRDPARDQSAAVASVRAVCAAVADAFEHAAVSTATRLPPGLVSALRERASPPTVTVVTGDQGAARRCAPMGQ* # ORIGINAL: g1475.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 2723 3118 . + . ID=g1475;Name=g1475.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 2723 3118 . + . ID=g1475.t1;Parent=g1475;Name=g1475.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 2723 3118 . + . ID=g1475.t1.exon1;Parent=g1475.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 2723 3118 . + 0 ID=cds.g1475.t1;Parent=g1475.t1 #PROT g1475.t1 g1475 MAGRVIALVAHDAKKDDMAKFALLHTEHIKRLFPGGVIATGTTGGRVADATGLVIERMLSGPLGGDAQIAALVATGKCHAVVFLVDPLSAHPHEPDVLGLVRVCNVHNVPVATNVATAELMMRGFNLNASA* # ORIGINAL: g1479.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 13205 16060 . + . ID=g1479;Name=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 13205 16060 . + . ID=g1479.t1;Parent=g1479;Name=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 13205 14629 . + . ID=g1479.t1.exon1;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 13205 14629 . + 0 ID=cds.g1479.t1;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 14880 15204 . + . ID=g1479.t1.exon2;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 14880 15204 . + 0 ID=cds.g1479.t1;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 15344 15590 . + . ID=g1479.t1.exon3;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 15344 15590 . + 2 ID=cds.g1479.t1;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 15796 16060 . + . ID=g1479.t1.exon4;Parent=g1479.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 15796 16060 . + 1 ID=cds.g1479.t1;Parent=g1479.t1 #PROT g1479.t1 g1479 MIVFRLWAARPLGALATTAARWRPFRSPLTASVCGRRASSSLSSSSADRESRVPHEITKGGTDEHSGGRRITTPADAFNRSKNWIFVPKIREPLYRYVWFFKYHPFEDPEAVRDTLFSQWYEWAVLGRIFVADEGINAQMIVPVSKIQQFEAHIRNASPGLANLELRYGRDVDVTKEALFPNLHVRIRPYIVNDGLKEPLNLSDSGAFLSPGEWQEAVMKEVVEPPPSGEKGLLIDCRNFFESEVGRFKGAVQMNVEYFRESFGEVDRILSETKADPRKTPVYIYCTGGIRCIKVGAYLRGKGYEKVAALDGGINAYMDYIEGEASRARLEGKSEPSRLFIGKNYVFDGRGLVGNETERATTDVLGKCLKCGSPGDLHINCSNSGCNSLFIMCPSCTSRLRSAANAQTAAPDTAGFGVGKSLKRDHTPSDKATGARKSGRKSGSKPMSDDGVLIASERRLTQHTLRAPCSDECTEIVERYPGEHIAPSQRVRFRRSFHSSATRQTATNGTNALPPYTPKFLKPTPTSIYCEAHSTPLSTYCVAAESCARENDPTGAHMVSGHLQGRLLSMLCASVAPARALDVGTYTGFSAMSLAEGLDLVREPEACVVSLETSTRAHLMATMNAATHPRRDRIEFKLCDALEHMTWMADEGLEVDFVYLDADKKKYKAYYEVLFGRRLLTRRGVVVIDNVLFHGCVAPDGPQPDDVPPARLARNEAMAKTLREFNAHVIADGRAECVMLPIRDGISLVRWRS* # ORIGINAL: g1486.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 39599 42227 . + . ID=g1486;Name=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 39599 42227 . + . ID=g1486.t1;Parent=g1486;Name=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 39599 39947 . + . ID=g1486.t1.exon1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 39599 39947 . + 0 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 40049 40163 . + . ID=g1486.t1.exon2;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 40049 40163 . + 2 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 40277 40382 . + . ID=g1486.t1.exon3;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 40277 40382 . + 1 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 40607 40979 . + . ID=g1486.t1.exon4;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 40607 40979 . + 0 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 41123 41204 . + . ID=g1486.t1.exon5;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 41123 41204 . + 2 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 41308 41460 . + . ID=g1486.t1.exon6;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 41308 41460 . + 1 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 41639 41727 . + . ID=g1486.t1.exon7;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 41639 41727 . + 1 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 41875 41951 . + . ID=g1486.t1.exon8;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 41875 41951 . + 2 ID=cds.g1486.t1;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 42123 42227 . + . ID=g1486.t1.exon9;Parent=g1486.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 42123 42227 . + 0 ID=cds.g1486.t1;Parent=g1486.t1 #PROT g1486.t1 g1486 MADPLLKLREFSSQNRPIVQDGDRVVFGDVAWPKSVQTNYKSALGGLYTLEALLFFLQNATLPHPQYVAAGSQAQVAVVSLPDRRDLLSFLKGETQTSSKIDPTVYIPPPEHVAAAGKHSLEDATRPDAKRARVDAAAVDAGSSSAMDLSGAPLTSSTTLGAPLDDAVAEIVSRERRLRTRHSVLHAPNKSFAIVLDIMEDIKKKDEAHRRPAVPPAAAPQPQAQQGVRRDQPGYNRYDARAPDPLRDVIRATDMAQFKIDTGGSLLGPAPTPKPQPQPQPQPQRAAPAPVRPTQPPSSRAQPPAPAPQPPARRGIPIIIIPAAANALITMLNAKDFLEDHKYVSADDKRKAGAKRQNDVIIDRVRQIPGGGGKETIRYQIIDAITRLSKSDWNRVIAVFAQGPLWQFKNWPWENPVDIFANVKGFHLKFEDAPVDPNIKKWDVSILTINRTKRHLDAPAAMKFWEILDAFVGSHDNQHIRA* # PASA_UPDATE: g1474.t1, single gene model update, valid-1, status:[pasa:asmbl_8236,status:12], valid-1 NODE_56_length_48611_cov_42.4356 . gene 157 2116 . - . ID=g1474;Name=g1474.t1 NODE_56_length_48611_cov_42.4356 . mRNA 157 2116 . - . ID=g1474.t1;Parent=g1474;Name=g1474.t1 NODE_56_length_48611_cov_42.4356 . exon 1509 2116 . - . ID=g1474.t1.exon1;Parent=g1474.t1 NODE_56_length_48611_cov_42.4356 . CDS 1509 2116 . - 0 ID=cds.g1474.t1;Parent=g1474.t1 NODE_56_length_48611_cov_42.4356 . exon 157 1249 . - . ID=g1474.t1.exon2;Parent=g1474.t1 NODE_56_length_48611_cov_42.4356 . CDS 157 1249 . - 1 ID=cds.g1474.t1;Parent=g1474.t1;3_prime_partial=true #PROT g1474.t1 g1474 MDPTSMGLDRQPSSRPRPDASAFGREHNERSTAAKKFAEFFARKKCMRELQHITTDVARGPPGRLPASAATEPNANPACGSAPVRAENASPTKGKLKEAHMNAGNVWEDEVGDAIRRSLPPCDNGRRPRVYPAKGTTRESSITSIPTGANALAADSSSQSAHVPTTTGDPPMAVIINEWINWMRTRADSGELKHVDLAFLNYRFDVPKSLYERLNIDHVFKFREYEPDIIHVRIVIGDDNLPILTMRVEDAKGSPAMQGAFAVQVSLYVLFLRAIMKLDDPLVQLESHEVRRQQRPSTGQHTVPRGTAAPAATRPKREAPSALLTAACANILSERSRVEGAASIRLRGKGLDAPVDFDADPIIAEIEAFFCNGEYKSMYEFESTTRQGPLTAPFYAWEGQRCVGCDMYDVCRGDVIAGTRHSIDPATVVSRSSGVDVLPGMTPEYKRSLVLADIEDLQGIISSKDTGVAKKWRAAATAIVDAGEKHTMVPTMRRTRQLGRKPPEVVVTGFVLCDPGSGVSRILAYGFHVWEEGKRGDIPSRYQVAHAGAPINPANLIVALSDVLTAM # ORIGINAL: g1483.t1 original gene structure, not modified by PASA # ORIGINAL: g1483.t2 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 25074 33195 . - . ID=g1483;Name=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 25074 26499 . - . ID=g1483.t1;Parent=g1483;Name=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 26178 26499 . - . ID=g1483.t1.exon1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 26178 26499 . - 0 ID=cds.g1483.t1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25970 26055 . - . ID=g1483.t1.exon2;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25970 26055 . - 2 ID=cds.g1483.t1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25639 25755 . - . ID=g1483.t1.exon3;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25639 25755 . - 0 ID=cds.g1483.t1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25481 25517 . - . ID=g1483.t1.exon4;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25481 25517 . - 0 ID=cds.g1483.t1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25074 25354 . - . ID=g1483.t1.exon5;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25074 25354 . - 2 ID=cds.g1483.t1;Parent=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 25074 33195 . - . ID=g1483.t2;Parent=g1483;Name=g1483.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 31027 33195 . - . ID=g1483.t2.exon1;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 31027 33195 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 28945 30828 . - . ID=g1483.t2.exon2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 28945 30828 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 26609 28765 . - . ID=g1483.t2.exon3;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 26609 28765 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 26178 26466 . - . ID=g1483.t2.exon4;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 26178 26466 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25970 26055 . - . ID=g1483.t2.exon5;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25970 26055 . - 2 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25639 25755 . - . ID=g1483.t2.exon6;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25639 25755 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25481 25517 . - . ID=g1483.t2.exon7;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25481 25517 . - 0 ID=cds.g1483.t2;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 25074 25354 . - . ID=g1483.t2.exon8;Parent=g1483.t2 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 25074 25354 . - 2 ID=cds.g1483.t2;Parent=g1483.t2 #PROT g1483.t1 g1483 MAFAFGFSFSQTNALKVHHLSGAGGGGQRWPAFPGVGVKATVAQPIEVVGGSPLSRAPGQAGQAQTQAPTQAQGPQAQGHVAGVQRPGAVAGGAAAAAAAAAAAAAKAGSIVVKTQSGNQPSRLAQINQRMQGHVQTGAPPRGASQAMGRGGDLKSPPSKGRGGRRPTGPPGPAKGMPPQLSMGHVGARPMSQMAHAPRPNLGGLPKPVGSMSPYTPTPPGSALRPPHPPSAVAAQAAASNTSAVMNAILARVDIDEASKFELVKQAFKMDGGVAGSGSG* #PROT g1483.t2 g1483 MMSGVRGRTDGDGPRDALMSATAASADCPAADMQMEANGDPTDHESERPAKRARIDSTASSTAVAPPAAHAGSDVAPVDSANVRDRVLEVKRTALERLRASFESRLRELYYLENFDNLLEIGTWKRDGDVRLHEFVGANLKRLDNGAEWTDAPTSLVATVTADAVALATPIRPSASPAVRAAQLETRHPLNGAGMGAAVPGGAIVVTPEARRRDIALTLTAIRNDELGGEDIEERARKEARVLQRVAELKREGLWSQKRLPKLHEPVRAKAHWDYLLEEMQWLANDFAQERKWKRALAVKTGRAVMRHFQEKATREDRKQKEDALRMRKLAAQVAREVRRFWADLGRVLLYKRQTLMEEQRQLAIGQQLESLVGETERYSTLLAQGLQSSGVASLARTVLVGAGAADRDGGPKDGAEATESMVVDAEFVPPSSDDDAEEDMEDTIAEQEKAEGGEDHYAEISALEKEGEMPLEELLAMYGYVQADGANGSPPDGDGDARNDDASDRMSVDDAEEAGATANVAQTVHVAPAAAMQSASADGSAVDRDRHTLARVGADAASREDLSVEGHKYNGGDGEGDRSGDDGDKSGDSDSGADDDDDGEDDDEDDDDDDDDDSMAGNDDDVGAAAGHDSLQALMCGEGSASAGVAGAAAGGASSMGGEQALNDAAEAAMSIQPTGNTLSTTAVRTKVPFLLRYSLREYQHVGLEWLVTMYEKGLNGILADEMGLGKTIQTISLLAHLACEKGVWGPHLVIVPTSVMLNWEMEFKKWCPGFKILIYYGSAKERKLKRTGWTKPNAFHVCITSYRLATQDHAAFRRMRWHYIVLDEAHNIKNFKSQRWQTLLNFNSVRRLLLTGTPLQNNLMELWSLMHFLMPGVFQSHTEFRDWFANPVTSMIEGNTEVNEGVIRRLHKVLRPFLLRRTKSEVEQQMPQKYEHVVTCRLSKRQRFLYDDFMSRAATRDMLSSGNFLGIINVLMQLRKVCNHPDMFETRPIVSPLVLPGIALSTASAAARATEYDPFVDLDLLSLNLCLAHWSSAPSAYAARRTLELSPGDASFSPDVVSAWPDELIAATPVSTEELGALSPATLAVLVQSKEASVVRWNSLRRERLGRLARVSAGRAGRPVLVDHDLMSSLLLPLRPADGVSALAAGSRHFLSYCDALHDMVKAPSQRGDEMKPVLSRFVLHVAPATSPTVQLRVSRPGSLARNAERMVEALGQRARSPAEDASHVVESAMSTQFPERRLIQYDCGKLQTLDRLLRDLKGGTHRCLIFTQMTRMLDILEQFLAFHGHTYLRLDGSTRIETRQALMDRFNRDRKIFCFILSTRSGGIGVNLTGADTVIFYDSDWNPTMDAQAQDRAHRIGQTRDVHIYRLISERTVEENILKKANQKRLLDDVVIKGGGFTTEFFKAVDVRDLFGEEGGSVIGTGPASATAPAADLTQQQLERALAETEDAQDVEAGRLLRREQAQEESEFSEEQPPPDAETVNAEGGDPSGDGQVVSRAAAEIDAMVSRLRPVQRYGLRVLEGVDTGSIAEGQHREQKERAAAQSRKRRHDDADNGDGPDGGSGPGGDGGSGGAGGGGGGGAGGGGHPPRGGGGASGGHSSKGGGGGGYGGVDGAGRGATGAGDSGDAAGGDGAGAGAGAGNGHAHALHDNDVAVSDDELVFVHGFGASDAGKDGLVLAFDGSVRTWMPPTPPETDEPFVDFALLSMYRLAMLEAKLRDAPSLKKWRKQQARAAAEARERAVQEAKSRKRKGGVLDKQAKRARVDGVASVGAIVSGILGEADVDDDLVILGKKGKGDRRKGKGAAAAEREQQLQREREEAASARREALLGKNKAGRKKAGGAATTLLSRDGGQWRADEDWALLRAIRVFGVRSAFNWALLAEHVNGICRPWGRQRSPAQCRERYLSVILPREEGKTVIEAPPVPAPPQKKKGKGDPVPPPPPHRPIVLDAQKGKPRPHNAGQLHAADAGRACRSLFLSLFESIQRIGSQRKLLRPTALSGGPIQAHSSHDRAAQIAGFDGKKNMANPVDIVAAQANRVRTTLGGDASAGSGAGGGSSMIVGGGLQPIPLTNALKVHHLSGAGGGGQRWPAFPGVGVKATVAQPIEVVGGSPLSRAPGQAGQAQTQAPTQAQGPQAQGHVAGVQRPGAVAGGAAAAAAAAAAAAAKAGSIVVKTQSGNQPSRLAQINQRMQGHVQTGAPPRGASQAMGRGGDLKSPPSKGRGGRRPTGPPGPAKGMPPQLSMGHVGARPMSQMAHAPRPNLGGLPKPVGSMSPYTPTPPGSALRPPHPPSAVAAQAAASNTSAVMNAILARVDIDEASKFELVKQAFKMDGGVAGSGSG* # ORIGINAL: g1480.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 17130 18792 . + . ID=g1480;Name=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 17130 18792 . + . ID=g1480.t1;Parent=g1480;Name=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 17130 17313 . + . ID=g1480.t1.exon1;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 17130 17313 . + 0 ID=cds.g1480.t1;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 17501 17944 . + . ID=g1480.t1.exon2;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 17501 17944 . + 2 ID=cds.g1480.t1;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 18081 18358 . + . ID=g1480.t1.exon3;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 18081 18358 . + 2 ID=cds.g1480.t1;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 18511 18792 . + . ID=g1480.t1.exon4;Parent=g1480.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 18511 18792 . + 0 ID=cds.g1480.t1;Parent=g1480.t1 #PROT g1480.t1 g1480 MTHGDVVIVSAARTAIGSFNGALAGIPASELGSTVIKAVLERAKVAPADVSEVVLGQVLTAATGQNPARQAAVGANIPVTIPAYGVNMLCGSGLRAIATGFQAIRSGDSKVVVAGGQESMSQAPHASQLRAGTKMGDVAFVDTMLKDGLTCAFNSYHMGITAENIAKQYGLSREEQDAFAAASQQKAEAAIEAGRFKEEIVPVVIKTRQGSVTVDTDEYPRKGSTVQTMQKLRPCFITDGSGTVTPGNASGINDGAAAVVLMSADEAARRGLASLGCIVAWAQAGVDPSIMGTGPIPATRLAIDKAGWKLDDVDLFEFNEAFAAQSLAVIKDLGVPIERCNVNGGAIALGHPIGASGARVVVSLVHEMQRRGARRGVAALCIGGGMGIAVCIERA* # ORIGINAL: g1482.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 24209 24529 . + . ID=g1482;Name=g1482.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 24209 24529 . + . ID=g1482.t1;Parent=g1482;Name=g1482.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 24209 24529 . + . ID=g1482.t1.exon1;Parent=g1482.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 24209 24529 . + 0 ID=cds.g1482.t1;Parent=g1482.t1 #PROT g1482.t1 g1482 MATGEYSKGLCSCCDDCGVCMFTWCCFPCAAGKGAAAAANKGGFDWLVCFASCCIPLVGECMLRQKVQQAYGIQQGFCGMCCTVCCCPLCAAVQDAQETKIRGDWK* # PASA_UPDATE: g1489.t1, single gene model update, valid-1, status:[pasa:asmbl_8241,status:3], valid-1 # PASA_UPDATE: g1489.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8242,status:12], valid-1 NODE_56_length_48611_cov_42.4356 . gene 44091 48541 . - . ID=g1489;Name=g1489.t1 NODE_56_length_48611_cov_42.4356 . mRNA 44091 48541 . - . ID=g1489.t1;Parent=g1489;Name=g1489.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 48411 48541 . - . ID=g1489.t1.utr5p1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 47803 48284 . - . ID=g1489.t1.utr5p2;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 47658 47693 . - . ID=g1489.t1.utr5p3;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 48411 48541 . - . ID=g1489.t1.exon1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 47803 48284 . - . ID=g1489.t1.exon2;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 47433 47693 . - . ID=g1489.t1.exon3;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 47433 47657 . - 0 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 46871 47302 . - . ID=g1489.t1.exon4;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 46871 47302 . - 0 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 46507 46727 . - . ID=g1489.t1.exon5;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 46507 46727 . - 0 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 46085 46373 . - . ID=g1489.t1.exon6;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 46085 46373 . - 1 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 45693 45932 . - . ID=g1489.t1.exon7;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 45693 45932 . - 0 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 45454 45565 . - . ID=g1489.t1.exon8;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 45454 45565 . - 0 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . exon 44091 45318 . - . ID=g1489.t1.exon9;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . CDS 45278 45318 . - 2 ID=cds.g1489.t1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 44091 45277 . - . ID=g1489.t1.utr3p1;Parent=g1489.t1 NODE_56_length_48611_cov_42.4356 . mRNA 44091 48541 . - . ID=g1489.t1.1.5b6be70c;Parent=g1489;Name=g1489.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 48531 48541 . - . ID=g1489.t1.1.5b6be70c.utr5p1;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 48411 48541 . - . ID=g1489.t1.1.5b6be70c.exon1;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 48411 48530 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 48196 48284 . - . ID=g1489.t1.1.5b6be70c.exon2;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 48196 48284 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 47803 48064 . - . ID=g1489.t1.1.5b6be70c.exon3;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 47803 48064 . - 1 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 47433 47693 . - . ID=g1489.t1.1.5b6be70c.exon4;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 47433 47693 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 46871 47302 . - . ID=g1489.t1.1.5b6be70c.exon5;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 46871 47302 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 46507 46727 . - . ID=g1489.t1.1.5b6be70c.exon6;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 46507 46727 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 46085 46373 . - . ID=g1489.t1.1.5b6be70c.exon7;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 46085 46373 . - 1 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 45693 45932 . - . ID=g1489.t1.1.5b6be70c.exon8;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 45693 45932 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 45454 45565 . - . ID=g1489.t1.1.5b6be70c.exon9;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 45454 45565 . - 0 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . exon 44091 45318 . - . ID=g1489.t1.1.5b6be70c.exon10;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . CDS 45278 45318 . - 2 ID=cds.g1489.t1.1.5b6be70c;Parent=g1489.t1.1.5b6be70c NODE_56_length_48611_cov_42.4356 . three_prime_UTR 44091 45277 . - . ID=g1489.t1.1.5b6be70c.utr3p1;Parent=g1489.t1.1.5b6be70c #PROT g1489.t1 g1489 MSVYCVPKGASKSAARTTRSTSQAEGSPVMFVKGAPESIIERCTFVRTKDGASAPLTPEIKKELLRILLDYGTGADTLRCLALATVDKPLEESKFQFTDARQFVTYEQNMTFVGIVGMLDPPRTEVRASIQRCKEAGIRVIVITGDNKNTAEAICRRIGVFAEDEDTTGKSYTGREFEDLSAKEKQSAVKRASLFSRVEPAHKSALVDLLQQANLVSAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAADMVLADDNFATIVSAVEEGRAIYNNTKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALSFNPPDLDIMQRPPRRADEPFVDSWLFFRYLLIGGYVGVATVAAAVWWFMFYSEGPQVEWYQLTNYLSCGKEGMPSCAVFEDPHPSTMALSVLVTIEMFNALNSLSENQSLFRMPPWTNLWLLGAILLSMILHFVILYVPFMSTLFQITPLNWEEWKAVLVISFPVIILDELLKAVSRIRVDRELARTLKKRS* #PROT g1489.t1.1.5b6be70c g1489 MAKKNAIVRSLPSVETLGCTAVICSDKTGTLTTNQMSVSKMVVIDELKGKTASILEFDVSGSTFAPVGEFTVSGKKEANPSRHAAVQELATICAVCNDASITYNSATKAFEKVGEATEAALKVLVEKIGDDSLALGSLDNADRATACSDHISSKYTKKFTLEFSRDRKSMSVYCVPKGASKSAARTTRSTSQAEGSPVMFVKGAPESIIERCTFVRTKDGASAPLTPEIKKELLRILLDYGTGADTLRCLALATVDKPLEESKFQFTDARQFVTYEQNMTFVGIVGMLDPPRTEVRASIQRCKEAGIRVIVITGDNKNTAEAICRRIGVFAEDEDTTGKSYTGREFEDLSAKEKQSAVKRASLFSRVEPAHKSALVDLLQQANLVSAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAADMVLADDNFATIVSAVEEGRAIYNNTKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNLVTDGLPATALSFNPPDLDIMQRPPRRADEPFVDSWLFFRYLLIGGYVGVATVAAAVWWFMFYSEGPQVEWYQLTNYLSCGKEGMPSCAVFEDPHPSTMALSVLVTIEMFNALNSLSENQSLFRMPPWTNLWLLGAILLSMILHFVILYVPFMSTLFQITPLNWEEWKAVLVISFPVIILDELLKAVSRIRVDRELARTLKKRS* # PASA_UPDATE: g1477.t1, single gene model update, valid-1, status:[pasa:asmbl_8234,status:3], valid-1 NODE_56_length_48611_cov_42.4356 . gene 5237 9545 . + . ID=g1477;Name=g1477.t1 NODE_56_length_48611_cov_42.4356 . mRNA 5237 9545 . + . ID=g1477.t1;Parent=g1477;Name=g1477.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 5237 5471 . + . ID=g1477.t1.utr5p1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 5237 5843 . + . ID=g1477.t1.exon1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 5472 5843 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 5941 6529 . + . ID=g1477.t1.exon2;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 5941 6529 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 6745 6921 . + . ID=g1477.t1.exon3;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 6745 6921 . + 2 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 7073 7161 . + . ID=g1477.t1.exon4;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 7073 7161 . + 2 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 7331 7508 . + . ID=g1477.t1.exon5;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 7331 7508 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 7691 7800 . + . ID=g1477.t1.exon6;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 7691 7800 . + 2 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 8461 8532 . + . ID=g1477.t1.exon7;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 8461 8532 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 8729 8804 . + . ID=g1477.t1.exon8;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 8729 8804 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 9258 9286 . + . ID=g1477.t1.exon9;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 9258 9286 . + 2 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . exon 9405 9545 . + . ID=g1477.t1.exon10;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . CDS 9405 9443 . + 0 ID=cds.g1477.t1;Parent=g1477.t1 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 9444 9545 . + . ID=g1477.t1.utr3p1;Parent=g1477.t1 #PROT g1477.t1 g1477 MQSAEKRSRADVAKMSEVVEVFDDYKKRSLEELKAALVLYGQTLPSAQALKPTYVIWYEKYVVPLKGRPLAEVLGEGKKAGSSAPSTPKKAASPKKAAPLVATPQKAAPVSPKKAEPVRHKLEEVDDADKEDYEDEEEVEERVARRVQSPRKSKPTTVVPKSGRAATETLPASAARRVVPQVVSASESEYDQPVEEEKPAVRRGKRPTREIRVVKETPKKTSRSDAARVLPAPAPAPAAARKPRTPEERRAYAVSSESDGNVTADQYEPRHPRRRAAAGSGISGLVMPIFVVVALGIAASWIVRSVPTPFCDSGAPNAIAGHSVVDCIPCPEHGTCKDGKLECDENYLAVGKTCQLKGDVTKLQKTMLEEAERLLAIRLGEKECQIFNDAHDNEGGLNKTFIKSILTEKFLKGHEKEFKSALAGLFADNLASLAANGDEYYLSRNPYKGSACVLREILERREVQVVLFVTTACIIAFLAVRQFLVEREEAQKVAEQVIEFLEKSNEAAIPHLRDRFVKKSHARHRIWKKAETIIESDSRVERLKNTSGEMYRWHDTTSASEKQESLYPPLSPSLLK* # PASA_UPDATE: g1485.t1, single gene model update, valid-1, status:[pasa:asmbl_8238,status:12],[pasa:asmbl_8239,status:12], valid-1 NODE_56_length_48611_cov_42.4356 . gene 36212 39056 . - . ID=g1485;Name=g1485.t1 NODE_56_length_48611_cov_42.4356 . mRNA 36212 39056 . - . ID=g1485.t1;Parent=g1485;Name=g1485.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 38793 39056 . - . ID=g1485.t1.utr5p1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 38391 38668 . - . ID=g1485.t1.utr5p2;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 38793 39056 . - . ID=g1485.t1.exon1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 37351 38668 . - . ID=g1485.t1.exon2;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . CDS 37351 38390 . - 0 ID=cds.g1485.t1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 37073 37244 . - . ID=g1485.t1.exon3;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . CDS 37073 37244 . - 1 ID=cds.g1485.t1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 36791 36975 . - . ID=g1485.t1.exon4;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . CDS 36791 36975 . - 0 ID=cds.g1485.t1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 36531 36645 . - . ID=g1485.t1.exon5;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . CDS 36531 36645 . - 1 ID=cds.g1485.t1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . exon 36212 36413 . - . ID=g1485.t1.exon6;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . CDS 36249 36413 . - 0 ID=cds.g1485.t1;Parent=g1485.t1 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 36212 36248 . - . ID=g1485.t1.utr3p1;Parent=g1485.t1 #PROT g1485.t1 g1485 MFGGAAGMGAQQKPAAGASMFGAPAPATGGTGASMFGAGGAATGGTGASMFGAGGTSGGAAAGGTGASMFGAGSASGGAATGGAGASMFGAGGAATGGTGASMFGGGSGAPAGGASLFGAKPAATTGAAPGNSLFGAPSAQGGAGTAGAAGSMFGAPSAGAPKPAAPMFGTGAAPSLSSASTMFGQQASSGSAPAPTAAATGAGLFGAQAGGAGAAATKPAAPGASLFGASAAPASAPPATATGGGPAPGTSLFSAAGGASTGTPTTGTPTTGGLFGAAGAAKPGTGGTAAGGLFGAAGAGATSTPAGLTLGSTTQGAAAAGTPGADTADPKKVRFAVGEEKTPGQGEGRAQAPRQFPSDIKGNTLEDIINKWNAELSTHLNTFTRQAIDIGKWDRTLVENGEKILELHAEVERVAVAQQELGESVEFVGTQQDELSRLLTSLEEAVDVEYARSRDTPHDRERERAHHQAAEIDRQLNAMGDSLRDMIGTLNKAGGNNVQDDDPVRQIVKILNAHLNSLQWIDQHAQALQGKITDINRLSHARLRDQERMSKRRFDGY* # PASA_UPDATE: g1484.t1, single gene model update, valid-1, status:[pasa:asmbl_8233,status:3], valid-1 NODE_56_length_48611_cov_42.4356 . gene 34774 36177 . + . ID=g1484;Name=g1484.t1 NODE_56_length_48611_cov_42.4356 . mRNA 34774 36177 . + . ID=g1484.t1;Parent=g1484;Name=g1484.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 34774 34816 . + . ID=g1484.t1.utr5p1;Parent=g1484.t1 NODE_56_length_48611_cov_42.4356 . exon 34774 36177 . + . ID=g1484.t1.exon1;Parent=g1484.t1 NODE_56_length_48611_cov_42.4356 . CDS 34817 36025 . + 0 ID=cds.g1484.t1;Parent=g1484.t1 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 36026 36177 . + . ID=g1484.t1.utr3p1;Parent=g1484.t1 #PROT g1484.t1 g1484 MAPNNTMETPVVPVNEMSTNAQADSNKAVRPVPFLAHSALPYLCGYLPFLLSALGLVWGGWYNYMTFALAFVIIPLLDIIIGLDDYNPTKEQEKMLEKKLSFRLVTWVWVPMQVALVFWSCWFIGNNDMTLLELIGAATAVGICGGLGINVAHELIHKPGTLEPALGRTALATVCYGHFYTEHLLGHHKRVSTPNDPATSRLGETFYSFWLRCVPDSFTSAWEIERVRLAKKGHSEWSLRNQVLIGALSSVAVAAAVGATAGAAGVAFFAVQSFLAFSLLEVINYIEHYGLVRAPKPSVDAAARPDYVRVTPMHSWNAGHRITNYFLFKLQRHSDHHASAGRRYQILRSFTASPQMPTGYAGMLLMALVPPVWFAVMNPRVAAVRARAAEYDNSGIDPFKEY* # PASA_UPDATE: g1481.t2, single gene model update, valid-1, status:[pasa:asmbl_8235,status:3], valid-1 # ORIGINAL: g1481.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 . gene 19159 23104 . + . ID=g1481;Name=g1481.t2 NODE_56_length_48611_cov_42.4356 . mRNA 19159 23104 . + . ID=g1481.t2;Parent=g1481;Name=g1481.t2 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 19159 19417 . + . ID=g1481.t2.utr5p1;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 19159 19573 . + . ID=g1481.t2.exon1;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 19418 19573 . + 0 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 19859 20203 . + . ID=g1481.t2.exon2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 19859 20203 . + 0 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 20503 20689 . + . ID=g1481.t2.exon3;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 20503 20689 . + 0 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 20817 20936 . + . ID=g1481.t2.exon4;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 20817 20936 . + 2 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 21352 21525 . + . ID=g1481.t2.exon5;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 21352 21525 . + 2 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 21800 21935 . + . ID=g1481.t2.exon6;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 21800 21935 . + 2 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 22250 22355 . + . ID=g1481.t2.exon7;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 22250 22355 . + 1 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 22549 22680 . + . ID=g1481.t2.exon8;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 22549 22680 . + 0 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 22809 23104 . + . ID=g1481.t2.exon9;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . CDS 22809 22994 . + 0 ID=cds.g1481.t2;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 22995 23104 . + . ID=g1481.t2.utr3p1;Parent=g1481.t2 NODE_56_length_48611_cov_42.4356 . mRNA 19418 22994 . + . ID=g1481.t1;Parent=g1481;Name=g1481.t2 NODE_56_length_48611_cov_42.4356 . exon 19418 19573 . + . ID=g1481.t1.exon1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 19418 19573 . + 0 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 19862 20203 . + . ID=g1481.t1.exon2;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 19862 20203 . + 0 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 20503 20689 . + . ID=g1481.t1.exon3;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 20503 20689 . + 0 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 20817 20936 . + . ID=g1481.t1.exon4;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 20817 20936 . + 2 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 21352 21525 . + . ID=g1481.t1.exon5;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 21352 21525 . + 2 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 21800 21935 . + . ID=g1481.t1.exon6;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 21800 21935 . + 2 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 22250 22355 . + . ID=g1481.t1.exon7;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 22250 22355 . + 1 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 22549 22680 . + . ID=g1481.t1.exon8;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 22549 22680 . + 0 ID=cds.g1481.t1;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . exon 22809 22994 . + . ID=g1481.t1.exon9;Parent=g1481.t1 NODE_56_length_48611_cov_42.4356 . CDS 22809 22994 . + 0 ID=cds.g1481.t1;Parent=g1481.t1 #PROT g1481.t2 g1481 MAESAPAEVAVEAGEGDRYGESSESEAVEGLSSDMHTPESSRMDRLTQSAPQQSKFSLQRQALLRQDTNLPSSDARAKERQKRSRALSVNDRPPVSLDGKTKPFFSPQLSRRPGTGNKTVETTQIKRIETADDDCEILNQYTLYNELGRGAFGLVRLAIDNNTGMRHAVKILSKKRLRRKGPVGRPGPGGADPLMDVRREIAILKKLDHPNIVKLVEVIDDQKEDNLYLVFELVEKGAIMEIKEVKTADPFPEDLARRYFVELVLGIEYLHFQRIIHRDIKPGNLLLSDDGIIKMTDFGVSHMCEGEDDSLTKTAGSPAFMAPETVSTAIGSYSGRSVDIWAMGITLYCFVFGRCPWVSANIIELYEKIRTEELPFPKTRAIDPRLKDLFHRMLDKDPHTRASIAEIKEHPWVTQDGANPVPTFEENCQGLIDVTDQEVEDAVKTITRLSTLILIKSMGRRRSLSLRRAKTPELQRPPSAGGDSVTEEVEPPVDAPTTAATTAPAAAPEPTPE* #PROT g1481.t1 g1481 MAESAPAEVAVEAGEGDRYGESSESEAVEGLSSDMHTPESSRMDRLTQSAPQSKFSLQRQALLRQDTNLPSSDARAKERQKRSRALSVNDRPPVSLDGKTKPFFSPQLSRRPGTGNKTVETTQIKRIETADDDCEILNQYTLYNELGRGAFGLVRLAIDNNTGMRHAVKILSKKRLRRKGPVGRPGPGGADPLMDVRREIAILKKLDHPNIVKLVEVIDDQKEDNLYLVFELVEKGAIMEIKEVKTADPFPEDLARRYFVELVLGIEYLHFQRIIHRDIKPGNLLLSDDGIIKMTDFGVSHMCEGEDDSLTKTAGSPAFMAPETVSTAIGSYSGRSVDIWAMGITLYCFVFGRCPWVSANIIELYEKIRTEELPFPKTRAIDPRLKDLFHRMLDKDPHTRASIAEIKEHPWVTQDGANPVPTFEENCQGLIDVTDQEVEDAVKTITRLSTLILIKSMGRRRSLSLRRAKTPELQRPPSAGGDSVTEEVEPPVDAPTTAATTAPAAAPEPTPE* # ORIGINAL: g1488.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 44106 44903 . + . ID=g1488;Name=g1488.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 44106 44903 . + . ID=g1488.t1;Parent=g1488;Name=g1488.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 44106 44903 . + . ID=g1488.t1.exon1;Parent=g1488.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 44106 44903 . + 0 ID=cds.g1488.t1;Parent=g1488.t1 #PROT g1488.t1 g1488 MALVKCRTVLVRLAAHGWAGAPRAPWPPSTPPPSSLAFLSQAPRHGANARALPVAVLGPRTSPVRRIYTAAHADRDLYGVLGLRNGASAGDIKRAYYELSKRHHPDVNAGSPASHEAFAAISDAYSVLGNRESRRKYDANRARAAATSGHSASSETASAAASYEQAQDEYFRRQEAAAEEDANHRQFVYNFDEHQRAHYYDTMRRRREAARNKKDRETDMGASRFHHMWRKYAVAGTAVMSLAIGSILVHFVQKARRGRLEGAAV* # ORIGINAL: g1478.t1 original gene structure, not modified by PASA NODE_56_length_48611_cov_42.4356 AUGUSTUS gene 10703 12609 . - . ID=g1478;Name=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS mRNA 10703 12609 . - . ID=g1478.t1;Parent=g1478;Name=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 12386 12609 . - . ID=g1478.t1.exon1;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 12386 12609 . - 0 ID=cds.g1478.t1;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 11904 12203 . - . ID=g1478.t1.exon2;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 11904 12203 . - 1 ID=cds.g1478.t1;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 11521 11642 . - . ID=g1478.t1.exon3;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 11521 11642 . - 1 ID=cds.g1478.t1;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 11138 11302 . - . ID=g1478.t1.exon4;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 11138 11302 . - 2 ID=cds.g1478.t1;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS exon 10703 10869 . - . ID=g1478.t1.exon5;Parent=g1478.t1 NODE_56_length_48611_cov_42.4356 AUGUSTUS CDS 10703 10869 . - 2 ID=cds.g1478.t1;Parent=g1478.t1 #PROT g1478.t1 g1478 MTCTTESAGMVKSLDDALRLLEEERRRRADAEQRVTHLEHQLALKDEAVDNGHVKGAHSASRALAKPLLTDTKHKVKFDSIEDAVKDIGEYRMAVLWVHCSTLNLEQFASHLHYVLIMTLLITTLLYVDANDNTKAAGKFVVVVDDEDRENEGDLIIAAEKVTPEQMAFMIRHTSGVICVALTSQRCEELELPLMIAANTEKHCTAFTVTVDFRHGTTTGICASDRALTANALASTAVRPEDFNRPGHMFPLRYKEGGVLVRTGHTEASVDLCKLAGLFPAGVLSEIAMDDGTMARRDSLAAFKEEFGLKMITIADLAEYIKSRA* # PASA_UPDATE: g1476.t1, single gene model update, valid-1, status:[pasa:asmbl_8237,status:3], valid-1 NODE_56_length_48611_cov_42.4356 . gene 3354 4996 . - . ID=g1476;Name=g1476.t1 NODE_56_length_48611_cov_42.4356 . mRNA 3354 4996 . - . ID=g1476.t1;Parent=g1476;Name=g1476.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 4955 4996 . - . ID=g1476.t1.utr5p1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . exon 4881 4996 . - . ID=g1476.t1.exon1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . CDS 4881 4954 . - 0 ID=cds.g1476.t1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . exon 4555 4637 . - . ID=g1476.t1.exon2;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . CDS 4555 4637 . - 1 ID=cds.g1476.t1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . exon 4104 4170 . - . ID=g1476.t1.exon3;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . CDS 4104 4170 . - 2 ID=cds.g1476.t1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . exon 3354 3910 . - . ID=g1476.t1.exon4;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . CDS 3736 3910 . - 1 ID=cds.g1476.t1;Parent=g1476.t1 NODE_56_length_48611_cov_42.4356 . three_prime_UTR 3354 3735 . - . ID=g1476.t1.utr3p1;Parent=g1476.t1 #PROT g1476.t1 g1476 MNYIRQNVNFVRQIGLKRAFWLLMREGDLRAGTLVGEDSLGNKYFEDNTRPLGRNRWVEYKSWNDYEASQITAEWHRWMHNISDFPPANDPRMNYRPKFLATYKPNLSGTKDEYVPYSTTPSKIQEWIPNKK* # PASA_UPDATE: g1487.t1, single gene model update, valid-1, status:[pasa:asmbl_8240,status:12], valid-1 NODE_56_length_48611_cov_42.4356 . gene 42617 43907 . - . ID=g1487;Name=g1487.t1 NODE_56_length_48611_cov_42.4356 . mRNA 42617 43907 . - . ID=g1487.t1;Parent=g1487;Name=g1487.t1 NODE_56_length_48611_cov_42.4356 . five_prime_UTR 43859 43907 . - . ID=g1487.t1.utr5p1;Parent=g1487.t1 NODE_56_length_48611_cov_42.4356 . exon 43825 43907 . - . ID=g1487.t1.exon1;Parent=g1487.t1 NODE_56_length_48611_cov_42.4356 . CDS 43825 43858 . - 0 ID=cds.g1487.t1;Parent=g1487.t1 NODE_56_length_48611_cov_42.4356 . exon 42617 43563 . - . ID=g1487.t1.exon2;Parent=g1487.t1 NODE_56_length_48611_cov_42.4356 . CDS 42617 43563 . - 2 ID=cds.g1487.t1;Parent=g1487.t1 #PROT g1487.t1 g1487 MAPNFAIVFDIDGVLYKYNGGMLYPIPGAGESLSLLRRLHVPHIFLTNGTGSTEDEKAASLSKLFNLPFTARQFVLSTTPMRSLAETYSDQRVLVVARTREFSLRAAAHYGFHNAVSLQDYVAGHPQLYPSRSYAPPIGAHRDAHLTPVRCVLLVSPPEDWGEAMQVVADVARSDGIPGSDHEALEQIVPVYAANPDFDYGALHSVPRLTLGAFLACLELVYERSTGRTLQITRYGKPFPEIYSFANASLAGQSESHTVPSRVYAIGDNPASDIRGANAHGWRSVLVRTGVFRAADNDQTDPATHVCDTVKEAVDWILDQEGMQGQ* # ORIGINAL: g3186.t1 original gene structure, not modified by PASA NODE_4155_length_2104_cov_38.3593 AUGUSTUS gene 1574 2068 . - . ID=g3186;Name=g3186.t1 NODE_4155_length_2104_cov_38.3593 AUGUSTUS mRNA 1574 2068 . - . ID=g3186.t1;Parent=g3186;Name=g3186.t1 NODE_4155_length_2104_cov_38.3593 AUGUSTUS exon 1574 2068 . - . ID=g3186.t1.exon1;Parent=g3186.t1 NODE_4155_length_2104_cov_38.3593 AUGUSTUS CDS 1574 2068 . - 0 ID=cds.g3186.t1;Parent=g3186.t1 #PROT g3186.t1 g3186 MGMLNNNNNNNNNNNNNNNNNNNNNNNNGANANNNNNVGDTLAAAAPEAEPMDFAPEADAQAPQGDAAPPLPESLNNAFMQAVMRNLLAQQQQQQQQPLQAQAQAPAATPAPPSNVPAIELYAPQLAMLRDMGFYDESTNLTAITRAQGDIDGAVDYIMSQMQE* # PASA_UPDATE: g3185.t1, single gene model update, valid-1, status:[pasa:asmbl_7031,status:12],[pasa:asmbl_7032,status:12], valid-1 NODE_4155_length_2104_cov_38.3593 . gene 137 1400 . + . ID=g3185;Name=g3185.t1 NODE_4155_length_2104_cov_38.3593 . mRNA 137 1400 . + . ID=g3185.t1;Parent=g3185;Name=g3185.t1 NODE_4155_length_2104_cov_38.3593 . exon 137 335 . + . ID=g3185.t1.exon1;Parent=g3185.t1 NODE_4155_length_2104_cov_38.3593 . CDS 137 335 . + 0 ID=cds.g3185.t1;Parent=g3185.t1;5_prime_partial=true NODE_4155_length_2104_cov_38.3593 . exon 544 610 . + . ID=g3185.t1.exon2;Parent=g3185.t1 NODE_4155_length_2104_cov_38.3593 . CDS 544 610 . + 2 ID=cds.g3185.t1;Parent=g3185.t1 NODE_4155_length_2104_cov_38.3593 . exon 938 1400 . + . ID=g3185.t1.exon3;Parent=g3185.t1 NODE_4155_length_2104_cov_38.3593 . CDS 938 1217 . + 1 ID=cds.g3185.t1;Parent=g3185.t1 NODE_4155_length_2104_cov_38.3593 . three_prime_UTR 1218 1400 . + . ID=g3185.t1.utr3p1;Parent=g3185.t1 #PROT g3185.t1 g3185 QLRGRKRLLLVPPSDSLSMYPMSHLKSKGNFASVDLNSPDYDAYPLAKDAHVSEVVLGPGEMLFIPVSWWHQVSALDPGHLNMSVNLWWTPEFCPLCHEAFDDSPVWCTVCKHTICAPCLRRHFSQSTQTGNTNGGTHGGTQGGSGAVTCPVDGRQVTFNDFDTNVAYDLQLFPDKGGLFG* # PASA_UPDATE: g6178.t1, single gene model update, valid-1, status:[pasa:asmbl_5676,status:12], valid-1 # PASA_UPDATE: g6178.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5677,status:12], valid-1 NODE_3179_length_4090_cov_41.7856 . gene 171 1301 . - . ID=g6178;Name=g6178.t1 NODE_3179_length_4090_cov_41.7856 . mRNA 171 1301 . - . ID=g6178.t1;Parent=g6178;Name=g6178.t1 NODE_3179_length_4090_cov_41.7856 . five_prime_UTR 1208 1301 . - . ID=g6178.t1.utr5p1;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . exon 1093 1301 . - . ID=g6178.t1.exon1;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . CDS 1093 1207 . - 0 ID=cds.g6178.t1;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . exon 529 587 . - . ID=g6178.t1.exon2;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . CDS 529 587 . - 2 ID=cds.g6178.t1;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . exon 171 301 . - . ID=g6178.t1.exon3;Parent=g6178.t1 NODE_3179_length_4090_cov_41.7856 . CDS 171 301 . - 0 ID=cds.g6178.t1;Parent=g6178.t1;3_prime_partial=true NODE_3179_length_4090_cov_41.7856 . mRNA 171 1301 . - . ID=g6178.t1.1.5b6be70b;Parent=g6178;Name=g6178.t1 NODE_3179_length_4090_cov_41.7856 . five_prime_UTR 640 1301 . - . ID=g6178.t1.1.5b6be70b.utr5p1;Parent=g6178.t1.1.5b6be70b NODE_3179_length_4090_cov_41.7856 . exon 529 1301 . - . ID=g6178.t1.1.5b6be70b.exon1;Parent=g6178.t1.1.5b6be70b NODE_3179_length_4090_cov_41.7856 . CDS 529 639 . - 0 ID=cds.g6178.t1.1.5b6be70b;Parent=g6178.t1.1.5b6be70b NODE_3179_length_4090_cov_41.7856 . exon 171 301 . - . ID=g6178.t1.1.5b6be70b.exon2;Parent=g6178.t1.1.5b6be70b NODE_3179_length_4090_cov_41.7856 . CDS 171 301 . - 0 ID=cds.g6178.t1.1.5b6be70b;Parent=g6178.t1.1.5b6be70b;3_prime_partial=true #PROT g6178.t1 g6178 MSFFSSVPNKFADVPIEADGSIHTEKFLKACSEIIPFFDVLGSTAFGPVKSDINGNVTRLTQRYETDKVKYALLQNIVNEEVANKKHTDGKSCANGLLWLK #PROT g6178.t1.1.5b6be70b g6178 MNVIVASLLHWYGSSVSDVLGSTAFGPVKSDINGNVTRLTQRYETDKVKYALLQNIVNEEVANKKHTDGKSCANGLLWLK # PASA_UPDATE: g6179.t1, single gene model update, valid-1, status:[pasa:asmbl_5675,status:12], valid-1 NODE_3179_length_4090_cov_41.7856 . gene 1867 3987 . + . ID=g6179;Name=g6179.t1 NODE_3179_length_4090_cov_41.7856 . mRNA 1867 3987 . + . ID=g6179.t1;Parent=g6179;Name=g6179.t1 NODE_3179_length_4090_cov_41.7856 . five_prime_UTR 1867 1973 . + . ID=g6179.t1.utr5p1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 1867 2000 . + . ID=g6179.t1.exon1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 1974 2000 . + 0 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 2228 2342 . + . ID=g6179.t1.exon2;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 2228 2342 . + 0 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 2588 2684 . + . ID=g6179.t1.exon3;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 2588 2684 . + 2 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 2889 2949 . + . ID=g6179.t1.exon4;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 2889 2949 . + 1 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 3297 3380 . + . ID=g6179.t1.exon5;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 3297 3380 . + 0 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 3689 3751 . + . ID=g6179.t1.exon6;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 3689 3751 . + 0 ID=cds.g6179.t1;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . exon 3937 3987 . + . ID=g6179.t1.exon7;Parent=g6179.t1 NODE_3179_length_4090_cov_41.7856 . CDS 3937 3987 . + 0 ID=cds.g6179.t1;Parent=g6179.t1 #PROT g6179.t1 g6179 MATFATTFTSSFEKVCKFTESGITQSREVEQFIKKRLVIELEYAKQLSKLVATTKETIPATKQVSVLEGSRRPSATELFGSLTGTWFNVLEAAQLEANSHETYATKLGRMIQEPLHSRTKEIDAQRKQLVTDGQKLLKDLQEAYTALKKGTKYALHILLFLACYI* # ORIGINAL: g12018.t1 original gene structure, not modified by PASA NODE_1369_length_11726_cov_43.0857 AUGUSTUS gene 11244 11537 . - . ID=g12018;Name=g12018.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS mRNA 11244 11537 . - . ID=g12018.t1;Parent=g12018;Name=g12018.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 11244 11537 . - . ID=g12018.t1.exon1;Parent=g12018.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 11244 11537 . - 0 ID=cds.g12018.t1;Parent=g12018.t1 #PROT g12018.t1 g12018 MPQGLNNTNPNTGGMMNSQQGLNSQGYNSQGLGGTGTGPQQGYSQPNQPGGFNSQQQPGSMGQVGGQAGGLPPQGGYLQSQARFGKPDRDIGTNDGL* # ORIGINAL: g12017.t1 original gene structure, not modified by PASA NODE_1369_length_11726_cov_43.0857 AUGUSTUS gene 1193 10691 . + . ID=g12017;Name=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS mRNA 1193 10691 . + . ID=g12017.t1;Parent=g12017;Name=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 1193 1222 . + . ID=g12017.t1.exon1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 1193 1222 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 1421 1733 . + . ID=g12017.t1.exon2;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 1421 1733 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 1849 2104 . + . ID=g12017.t1.exon3;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 1849 2104 . + 2 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 2373 2554 . + . ID=g12017.t1.exon4;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 2373 2554 . + 1 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 2684 3103 . + . ID=g12017.t1.exon5;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 2684 3103 . + 2 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 3246 4113 . + . ID=g12017.t1.exon6;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 3246 4113 . + 2 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 4304 5074 . + . ID=g12017.t1.exon7;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 4304 5074 . + 1 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 5294 5419 . + . ID=g12017.t1.exon8;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 5294 5419 . + 1 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 5762 7001 . + . ID=g12017.t1.exon9;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 5762 7001 . + 1 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 7223 8278 . + . ID=g12017.t1.exon10;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 7223 8278 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 8515 8622 . + . ID=g12017.t1.exon11;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 8515 8622 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 8783 8861 . + . ID=g12017.t1.exon12;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 8783 8861 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 9019 9085 . + . ID=g12017.t1.exon13;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 9019 9085 . + 2 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 9293 9443 . + . ID=g12017.t1.exon14;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 9293 9443 . + 1 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 9652 9795 . + . ID=g12017.t1.exon15;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 9652 9795 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 10089 10140 . + . ID=g12017.t1.exon16;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 10089 10140 . + 0 ID=cds.g12017.t1;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS exon 10483 10691 . + . ID=g12017.t1.exon17;Parent=g12017.t1 NODE_1369_length_11726_cov_43.0857 AUGUSTUS CDS 10483 10691 . + 2 ID=cds.g12017.t1;Parent=g12017.t1 #PROT g12017.t1 g12017 MAEAELRQHQAAHFVVSEAQREKADQWLEKCRDFFVQSKAVEIPLDAGLVIENVRDAIVVQYAVKLIPNLGHHLEVIRIESAELLKQLALIFATDRTHDPAMETVTQDLQNNHAGHRVVHKLFSIIGRHLAPLAIALVAGLESFLRYPGAAVRELALTGIVRLIVENHLVFVKEDNLAAVWNVYFLTQARDYETEYIISRSVLCEAMKLLSPTMVNNDALAVRVIERLLRLPDKTRQEVTAIKSALTELFDQISKSKADKLKKDVYVCFRNLLSPYDEHNYDLLEWAIGAFTHAMAGVRVASKFPPLREFADLLQTCVFAPPPLVRYGAAICIHACIDLCPSILEDQPHLYAYVVSGCLDADHQTSSLYMSTLMSLQHTPVAKTIGTLVAAYRSEMFGAKGARQSEYHPQHSQKDAPSASFLEKRSGSIAPPSNSYGGAFASPTAAALPHVAQQPVSLSLQESPIAALSLNGQLVALLEKAASNSSPLSPKILQSVLNAVDFMSPPQCYRQMDLVRLWSAATTTVDSLLLRTLQTKVASPDPAIRVKAVQALRALAPTLRKGLEAGGGLTDRDLCGASSYLVRYMLSFAGDASQSVQSRQSATYVTPDPTSSLEEALLTVRSFPYELMSPTATQQLIDALGRLAANANRRVRGLVYNTLADCRQFWKTEELLDEIIALMLLCLGDAAPENVAIVVNALDKIVQNTSHKSLRGPITDCRNAGLLDAKPIVSLGALDKLVMAMSSQASTLSRVLQTMQKHHLFTLTCEALLSGRKASSGRDYEDSVQTLSHRACYTIVLCAKLGFPIPPALIEEPTRRSVTHRMLDEFFDRSEPMSRYLVSVTAIHCLFPTPTTVDFTLLKEMMRTACSRLDVRVPNVAKLNALGFLTLLTALRLPGVNRITSVGYAEKAIEIAENDPTPVCRVAAMELIEVLMLTRPRSMGRLHEHVRDVLRELVAHSDRKVAEVAARIYPLVFRVADPATAVDQVDFLRHDLSPALGTTWEIAADPLLTQLSPFERAKIVSATIAAMGAISVSDVSMRIVEAVIGFLHNQNAAYRQPACDAVLQQLPLLGKSQGAWAMWIAIPLSADPMREIRVLFNRHLRNLPSHITYRQSQLPSEEGLSDAVSSADANGDSAETGLEIDKLPDGRVQVNDDHTLDSILTTTDRRFRYLATPKEWEDVWSDVETPRTMMRGYVQLIRRIRDECRFDLAGADRVNQVLYHLRAYLGVPQLAGPAMVVLSEYCTTHTSDVSSHVIETLLVNVGRSTRVPGRNTRALVEGCIAGLRNISDKSAVLFRTVLDALTAVDASAEGDLLCLYHLCPNIRRQCPEKVPYLLERYLRLLSGQNVPVEDRTAAIALVGELATMATSALAAQVVTAIGESIDDGNALLRRTCEEQLSKLVDKVGLDHPFYRKLLEQVTAASFSADAEVRARSLRRVCGLGRAFKVPDLLRFAVVFLSDPVREIRRGMLEAGLDGTLPKMTKVFEAAISVEECKKYTKESEPNAKSRAILERLKQLRSKSIGRAFARLDDVPPEIPLPDEDPLNKKFYTSDTYRRFMQYFRIDPLMSHDRLGFSTAAMVASTTNLYSAPTTSASAINALGVGNTSTTDIHDATHGDASPTLAQVDELLRYKLIPVVARIIEKNAPMAQGLLKEYLALAESGISEQAGAVDVIVGRGVHAVVVYVAILCAYERVSPEGNQHLLALQKFVTDCRARCDLVRGKAFEDMQRSLFFQADFLDIPITTQEQFDSVEAHRKILDESGLDSAHKTNKMDSFMQFQRKKAAVAAALDEQTKELRALTFLYIRAIESLGQFYQNSKNTPEDRLTVGFQGILDIISDDHRAVRSSVMTVLLGAVYVHASSAKKVFSKEIKSTVDRLSTMLREQGQTLRRKKADVLQMVAFLLHYVDEGHRRVSAIEQFVALWDDPDGEVRRRSIDMVQYIGESGLPEMAQFLEEKDGANSMLMVNITKRVNNPDYMDREALNKLLKWYFSRNLSAVATKAAEASASADDGDSANSRRKSKAPRS* # PASA_UPDATE: g9152.t1, single gene model update, valid-1, status:[pasa:asmbl_6539,status:12], valid-1 NODE_3782_length_2767_cov_34.279 . gene 464 726 . - . ID=g9152;Name=g9152.t1 NODE_3782_length_2767_cov_34.279 . mRNA 464 726 . - . ID=g9152.t1;Parent=g9152;Name=g9152.t1 NODE_3782_length_2767_cov_34.279 . five_prime_UTR 553 726 . - . ID=g9152.t1.utr5p1;Parent=g9152.t1 NODE_3782_length_2767_cov_34.279 . exon 464 726 . - . ID=g9152.t1.exon1;Parent=g9152.t1 NODE_3782_length_2767_cov_34.279 . CDS 464 552 . - 0 ID=cds.g9152.t1;Parent=g9152.t1;3_prime_partial=true #PROT g9152.t1 g9152 MASSSADDGKDEFGGDAVGGIGPDGQKRR # ORIGINAL: g9153.t1 original gene structure, not modified by PASA NODE_3782_length_2767_cov_34.279 AUGUSTUS gene 1221 1730 . + . ID=g9153;Name=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS mRNA 1221 1730 . + . ID=g9153.t1;Parent=g9153;Name=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS exon 1221 1363 . + . ID=g9153.t1.exon1;Parent=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS CDS 1221 1363 . + 0 ID=cds.g9153.t1;Parent=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS exon 1518 1588 . + . ID=g9153.t1.exon2;Parent=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS CDS 1518 1588 . + 1 ID=cds.g9153.t1;Parent=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS exon 1714 1730 . + . ID=g9153.t1.exon3;Parent=g9153.t1 NODE_3782_length_2767_cov_34.279 AUGUSTUS CDS 1714 1730 . + 2 ID=cds.g9153.t1;Parent=g9153.t1 #PROT g9153.t1 g9153 MHSVSARANALFAYSVTAIGVLTFACASSSIFFPDTTDAKMDLVRVNMRVLQEYRNAIKSDLALVEFDIDAAWCIG* # PASA_UPDATE: g3537.t1, single gene model update, valid-1, status:[pasa:asmbl_416,status:3], valid-1 NODE_110_length_39053_cov_39.9952 . gene 5074 10452 . + . ID=g3537;Name=g3537.t1 NODE_110_length_39053_cov_39.9952 . mRNA 5074 10452 . + . ID=g3537.t1;Parent=g3537;Name=g3537.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 5074 5326 . + . ID=g3537.t1.utr5p1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 5074 6067 . + . ID=g3537.t1.exon1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 5327 6067 . + 0 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 6346 6397 . + . ID=g3537.t1.exon2;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 6346 6397 . + 0 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 6650 7885 . + . ID=g3537.t1.exon3;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 6650 7885 . + 2 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 8072 8327 . + . ID=g3537.t1.exon4;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 8072 8327 . + 2 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 8456 8517 . + . ID=g3537.t1.exon5;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 8456 8517 . + 1 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 8756 8837 . + . ID=g3537.t1.exon6;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 8756 8837 . + 2 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 8952 9252 . + . ID=g3537.t1.exon7;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 8952 9252 . + 1 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 9528 9672 . + . ID=g3537.t1.exon8;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 9528 9672 . + 0 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . exon 9998 10452 . + . ID=g3537.t1.exon9;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . CDS 9998 10236 . + 2 ID=cds.g3537.t1;Parent=g3537.t1 NODE_110_length_39053_cov_39.9952 . three_prime_UTR 10237 10452 . + . ID=g3537.t1.utr3p1;Parent=g3537.t1 #PROT g3537.t1 g3537 MSSPHTTATVECGCHDNDDDDVWAASSFRFLQPAPARTGTLPSRQSRFDLVSPSVAVKVRGNPTRNPTRRPRPPRDRTKPSRRKRDVALSAAGQPIAAHHVPNEVTADKALRHGVLSALLADAECESAVVGDEGQWVVADLSQSSSGAAKRRKTEGGGPCNDPDAANDVTCTAPLAATPLSPSNAAPTVGPVTCAKRLSQRTLAESLADALRTRGTGRAARVNSNPNSMEASYCPNCQAPLRTGIASAIELHVFKCFDVEISNVECEMGVDCTVADMDHFRRRRHSELALIRSMGGGVSIEVYMETGDSMNARVAETVTVTATGTHVTTESPMDTSRPELLNAPTSSSPPAHSCGGAPIQRLLSPHRSPQCPGQPLSTPDSGVCVSPDVPSHETCFSSPADAVMSDADDAVTACDGGRADRPSVRTAGVANALSSPLEHKSGCGRLEWDCGDATFLGNDGEKALNDASDDACSDPSDAIEEFPCDDDVFDDALLEDLLALEQTGGVDNVHVTTPADRRSSKVSAGFVDHRVGPNPTPDPDPTARLGLAVAPAYTPTLGNGHRMHVTPPAAHGQRNLLSYFGSIAGVKKAVSDTVSLVSGAIAGRVTHALANVSSRQSTTASKVLESSAAVDTPSLLPVDAKKGKVRRQRLKTGASGPQDTPNPNPRRQCPFYKWIPGTPFVVDAFRYGRIAGASAYFLSHFHSDHYGGLSKGWSHGPIYCTAPTANLAEASLGVKREFLVVLPLDTAVVVDGVEVTLVDANHCPGSAMFLFRLRDGRSYFHTGDFRADSSMVSHTALAGLRLTGVFLDTTYCDPRYAFPPQAECVQFAADTARAAVIRNNRTLVVVGTYVIGKERVFKAIADALGSKIYVDERKYRTLACLEWPELTRMLTRDENATRLHVVPLWDIGTKKLREYLARYSPRYNAVVAFRPTGWTFSGAAATDLNQIRPVVSGPITVYGVPYSEHSSYTEMRDFIVALNPRKIVPTVNVGAPEKRAQMEALFRLWLGGKGGDVSGGGNDDADALAANGVGLVVEWKN* # PASA_UPDATE: g3544.t1, single gene model update, valid-1, status:[pasa:asmbl_414,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 35671 37363 . - . ID=g3544;Name=g3544.t1 NODE_110_length_39053_cov_39.9952 . mRNA 35671 37363 . - . ID=g3544.t1;Parent=g3544;Name=g3544.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 37226 37363 . - . ID=g3544.t1.utr5p1;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . exon 37131 37363 . - . ID=g3544.t1.exon1;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . CDS 37131 37225 . - 0 ID=cds.g3544.t1;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . exon 36858 36939 . - . ID=g3544.t1.exon2;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . CDS 36858 36939 . - 1 ID=cds.g3544.t1;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . exon 36540 36731 . - . ID=g3544.t1.exon3;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . CDS 36540 36731 . - 0 ID=cds.g3544.t1;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . exon 35671 36405 . - . ID=g3544.t1.exon4;Parent=g3544.t1 NODE_110_length_39053_cov_39.9952 . CDS 35671 36405 . - 0 ID=cds.g3544.t1;Parent=g3544.t1 #PROT g3544.t1 g3544 MTNVFANIVIVKRNGAEGSKFPWVDEKLTFGRDTACDIRIQLPNVDKQHTVLQRTADGRAVLSVLSNAAPTLLNGKPIDQDVTLSDNDVFTISDRAFRFEYTAAPKAADTPKKAATPKDTPKKARTPLQLRNETVPENNASAQIATPNKPSTPAQAAAPTASATITPPPAVDSTAAHVTPKQEAPASAAMSTRRRSVRFGPHLNPMIFDKDLPPATPVRRGEMPAAPSADTVHEAPEEAAEEDGEEEAGPSESAEALRRLQTPLRKAIQGGAELKKKELARKLATPLRSSILRGLTLRQSMKRLATPVRTAIQSGIELKKKPRAAALATPVRKAIEEGVELKKKKTKKLATPMRKAIEEGVELXXXC* # ORIGINAL: g3538.t1 original gene structure, not modified by PASA NODE_110_length_39053_cov_39.9952 AUGUSTUS gene 11214 14575 . - . ID=g3538;Name=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS mRNA 11214 14575 . - . ID=g3538.t1;Parent=g3538;Name=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 14111 14575 . - . ID=g3538.t1.exon1;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 14111 14575 . - 0 ID=cds.g3538.t1;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 12061 13875 . - . ID=g3538.t1.exon2;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 12061 13875 . - 0 ID=cds.g3538.t1;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 11674 11783 . - . ID=g3538.t1.exon3;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 11674 11783 . - 0 ID=cds.g3538.t1;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 11214 11343 . - . ID=g3538.t1.exon4;Parent=g3538.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 11214 11343 . - 1 ID=cds.g3538.t1;Parent=g3538.t1 #PROT g3538.t1 g3538 MRRSASDPYGHVPMYLSSNMNDIGLPEVNEDGLGQSLGGGGDAVADYGTPGGVYGQFDASTSAGSLALRHMRRAQSMSNDHGIDVGRHAEYGLVMRSAQSPAMPKRSRSSSMMPGPYERRPSMKSGLKRSTSSLANAGSMHFDGLVSDLETMALEGLGDGDAQSLRLSQQGLCGLGGNGLGDVGGLNGMGNGMGNGMGNGNGVHPFGSHHALNTADDGFGLASNPFGNEDADALEALLNASGGSMLPDFLVDTFPSALADSGYLDGGLLGDTSLLSLDAPPRLTSASDLSELSPTPSSLGHTSYELSGGGGMQQPILAGMSPVAVMSPQELQAQFMMHGSLDPDVDSSQSPVDARYTDTRGYEVLQQQHQHQLQQLQQQQQQQQQQQQQQQQQQQLQQLQQQQQQQQQQQQQQQQQHLQQQHNQFPSDPAHQRTNFSQSFPAQMFSQQVQSQSQQASGGGVESSQAVPRVGGASKRVVNRHSIHGDSVGTLGPDTEFVTKHTLDGTCVYASPSCAHTVGFEPNEMQGRSFYDFVYMEDLQLFSDAHMRAASAANSKEQVEVTYRFWVKSGAPVPVVTKMSLFCNPISHEAQFIVFFSNVLGETYQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQLLQQPAQSKSGHPSPQQRHASPMGYSGETSLSYGQSGGSVGNYVPTLARQGMRQTSPQPPTVTSQSQHIASPAFLAAQAQAQAHQQHLQQQQQQQAAMQSSIQQQDALRMRVLQQMRAAAGETQKAPIASALPRKPFTLSCMECATTISPEWRRGPSGPKTLCNACGLRYAKRMKQQTQQHTPIPHIPSGSASPMMDSRKTSM* # PASA_UPDATE: g3539.t1, single gene model update, valid-1, status:[pasa:asmbl_411,status:12],[pasa:asmbl_420,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 15697 20703 . - . ID=g3539;Name=g3539.t1 NODE_110_length_39053_cov_39.9952 . mRNA 15697 20703 . - . ID=g3539.t1;Parent=g3539;Name=g3539.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 20645 20703 . - . ID=g3539.t1.utr5p1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 20629 20703 . - . ID=g3539.t1.exon1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 20629 20644 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 20347 20468 . - . ID=g3539.t1.exon2;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 20347 20468 . - 2 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 20095 20185 . - . ID=g3539.t1.exon3;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 20095 20185 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 19777 19924 . - . ID=g3539.t1.exon4;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 19777 19924 . - 2 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 19421 19601 . - . ID=g3539.t1.exon5;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 19421 19601 . - 1 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 19048 19125 . - . ID=g3539.t1.exon6;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 19048 19125 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 18675 18782 . - . ID=g3539.t1.exon7;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 18675 18782 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 18444 18508 . - . ID=g3539.t1.exon8;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 18444 18508 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 17966 18107 . - . ID=g3539.t1.exon9;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 17966 18107 . - 1 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 17701 17782 . - . ID=g3539.t1.exon10;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 17701 17782 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 17319 17472 . - . ID=g3539.t1.exon11;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 17319 17472 . - 2 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 16863 17052 . - . ID=g3539.t1.exon12;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 16863 17052 . - 1 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 16478 16645 . - . ID=g3539.t1.exon13;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 16478 16645 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 16191 16338 . - . ID=g3539.t1.exon14;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 16191 16338 . - 0 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . exon 15697 16069 . - . ID=g3539.t1.exon15;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . CDS 15963 16069 . - 2 ID=cds.g3539.t1;Parent=g3539.t1 NODE_110_length_39053_cov_39.9952 . three_prime_UTR 15697 15962 . - . ID=g3539.t1.utr3p1;Parent=g3539.t1 #PROT g3539.t1 g3539 MSANLQRVYAALPHTSRGMPVHLGGDPKGKNFIYTNGNSVIIRDIANPAIAETYAEHATTATVARYAPSGFYIASADESGKIRIWDTTQKEHLLKYEYRVLSGAIKDLVWSDDSKRIAACGEGRDKYGVVIMWDSGSSVGEITGHSKAVNSIDMKQTRPYRIATGGEDFQTAFFEGPPFKFKKADKEHSRFVNCVRFSPDGNRYLTVGSDYKGFLYDGKTGDKLAELGGGNAHTGSIMSCSWSPDSKQVLTASADKTAKIWDIEKNVAVSTFTFGETIDDQQMGSLWQGSHLLTVSLSGYINYLDVNNPSKPLRILKGHNKNITALTIDNDSKTFFSGSYDGRVAAWDVADGSNEVFGGNGHTNQVSSLAVQSDSLVSVGMDDAIRYTPTAKREYSGEKIVAETTPVGLGVGKTLSVVPCLQEVVVLRNGKKVSSFKADWDPLSAAVSPSETEVAVGSKDGKIRIYDVNGDALAEKKVLSANGAVNDIAYSPDGALLASGDSGRAVLVWDAKSWEQVQSGWVFHNAKVNSVAWTPDSKHLASGALDTSVFVWSLEKPSKRINIKGAHPAGVSRVAWLSNDVVLSSGQDCCVKSWTVTHH* # PASA_UPDATE: g3543.t1, single gene model update, valid-1, status:[pasa:asmbl_415,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 33392 35633 . - . ID=g3543;Name=g3543.t1 NODE_110_length_39053_cov_39.9952 . mRNA 33392 35633 . - . ID=g3543.t1;Parent=g3543;Name=g3543.t1 NODE_110_length_39053_cov_39.9952 . exon 35523 35633 . - . ID=g3543.t1.exon1;Parent=g3543.t1 NODE_110_length_39053_cov_39.9952 . CDS 35523 35633 . - 0 ID=cds.g3543.t1;Parent=g3543.t1 NODE_110_length_39053_cov_39.9952 . exon 33392 35390 . - . ID=g3543.t1.exon2;Parent=g3543.t1 NODE_110_length_39053_cov_39.9952 . CDS 33687 35390 . - 0 ID=cds.g3543.t1;Parent=g3543.t1 NODE_110_length_39053_cov_39.9952 . three_prime_UTR 33392 33686 . - . ID=g3543.t1.utr3p1;Parent=g3543.t1 #PROT g3543.t1 g3543 MRKAIEEGVELGAVYKKALNTPIRAEIEDGVELKKKKSKKLATPMRKAIEEGVELKKKKAKKLATPMRKAIEEGVELDAVYKKALNTPIRAEIVNGKELETVYKKALTTPIRAEIESGVELESVYKKALVTPVREEIVRGVPLKNVYKKMPTPLRTEIVGGYKLRPRAYPTIATPLRSDIAKGVALKHVEVPAPVIASVAPAVVATPTVVSEVPAVPAPKRGRKAREAVADVPAAVLPQAIAEVAVAVEQAKTPAKRGKRKAEDAPAGFVAKVAAVEVVAETVVAIAEKAPVARAGKRKAGDAIEAPVANAVAVMAVEEKPSKRTKKTASVAAPATPAVQPEITVPVEQKAKPTRGRKAADVVVSEPVVTPAPVPAPVEPVAAEATKPKTGRGKAATIEVKESAEAPSAPKVTKATRGKAAAAVAVAEPVVAMEIEVAALESEEPKSSIRGRRGKTVTICEPLASAVEAVATAPAPQETKEAPTARGKRSRAALEAEAPLAVAETPADPKAKRARSVKAAPEPAPAAAAVVAEKPAAVSADACQVCASAAQESKLLVCDGCETLWHLFCLNPPLVRVPKGDWHCPGCAEKAKAASAPVRKTARK* # PASA_UPDATE: g3540.t1, single gene model update, valid-1, status:[pasa:asmbl_412,status:12],[pasa:asmbl_413,status:12],[pasa:asmbl_421,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 21057 25154 . - . ID=g3540;Name=g3540.t1 NODE_110_length_39053_cov_39.9952 . mRNA 21057 25154 . - . ID=g3540.t1;Parent=g3540;Name=g3540.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 25027 25154 . - . ID=g3540.t1.utr5p1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 24716 24771 . - . ID=g3540.t1.utr5p2;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 25027 25154 . - . ID=g3540.t1.exon1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 24684 24771 . - . ID=g3540.t1.exon2;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 24684 24715 . - 0 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 24111 24306 . - . ID=g3540.t1.exon3;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 24111 24306 . - 1 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 23735 23873 . - . ID=g3540.t1.exon4;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 23735 23873 . - 0 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 23237 23347 . - . ID=g3540.t1.exon5;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 23237 23347 . - 2 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 22919 23066 . - . ID=g3540.t1.exon6;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 22919 23066 . - 2 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 22430 22626 . - . ID=g3540.t1.exon7;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 22430 22626 . - 1 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 21815 22158 . - . ID=g3540.t1.exon8;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 21815 22158 . - 2 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . exon 21057 21689 . - . ID=g3540.t1.exon9;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . CDS 21153 21689 . - 0 ID=cds.g3540.t1;Parent=g3540.t1 NODE_110_length_39053_cov_39.9952 . three_prime_UTR 21057 21152 . - . ID=g3540.t1.utr3p1;Parent=g3540.t1 #PROT g3540.t1 g3540 MWQANRLMNNVAAVVMNYSEIEKKVRDATNTEAWGPSGTQMADLAKLSYNYQEFPEIMNMLWKRMLKEKAWRVIYKSLLLLDYLLKNGSERVVEDARDHVYDIRNLESFKFVDEQQKDQGLNVRHKAKDLVNLIQDDDRLRDERTRAKKNKDKYIGVGNHDDGGYRGTYDDEPSSIRRPYNDEGSEERPTQSSNRTPFRDDPSAGSHDRSRLSGEHDSYRAAPQSKPQAQQATPAFTSPQRTQPQSSLVDFGSVPQKQTQPFNFDAFGTSPAKHDDFSDFQAAEAPFHQQPQQQQRPAPAPAPVAAFADFGDFQAATHSPARPVAAAAPVHIPVAAAPVPMASFAPITPVNALHATPFMEPLQPLSAQSTPQQQAQQQQQQQQKAQQDQKTSNFLGSAGGLVNLDATSLTSRTDNKQGSYVPMAAAQQPAFGFAGAQPAYAAGAPGVRPTAAVARIPGAAPVGYQAAPYAAQPVGFGAQPVGFGAQPAGFAPANYAAFAQPAAAAYGQPGAAGYGQQAAFGGVYGQPAGAVGGFPAGYGQAQGVRPAGFPQQQQQQQFRGAQQQTFF* # ORIGINAL: g3542.t1 original gene structure, not modified by PASA NODE_110_length_39053_cov_39.9952 AUGUSTUS gene 30440 32903 . - . ID=g3542;Name=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS mRNA 30440 32903 . - . ID=g3542.t1;Parent=g3542;Name=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 32778 32903 . - . ID=g3542.t1.exon1;Parent=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 32778 32903 . - 0 ID=cds.g3542.t1;Parent=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 30764 32671 . - . ID=g3542.t1.exon2;Parent=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 30764 32671 . - 0 ID=cds.g3542.t1;Parent=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 30440 30658 . - . ID=g3542.t1.exon3;Parent=g3542.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 30440 30658 . - 0 ID=cds.g3542.t1;Parent=g3542.t1 #PROT g3542.t1 g3542 MWDSPVGRRSMTSHEKVLWDALVQHGCDIWTADCASSMKPGEDAEFNDVNVNIKVISLLRATFLLTSQVDQPAPAALDPLSVAVVNALFTCLRDCIDAEIKVAEFADFLATPTTSQRCIHAAATATYHAATGGSFGWRELVANAATDVFGRHVGVDRGLLGGQIHSGTRDRECWDCIVHHLRACIVGGEGDLDIDWGSLAVAPSFHLLVSGARARQILAEYIDIGSSAFASATSAGLANIHSTLLHVNGKRPGAMTMLNPLSVGSLASHASPSLAGPSALCAASAHGTPAADLFGAIQMMAFATEGTVDAFQDPCVDDCDASATHEQAAYLPEYSHTPGVWSESVAGHSHDDASDTELSYEGGDSVNEAESGMDNADSIMSPDGVEYDAMASTLNSPNASSTASHVAAATLLNMATDSSRSPSAAPANYDDDMSPESLASIDFSDSPECEDLAPYAGRRGTATLVLGAIRKRPLQARNMDEDIETNLSEQLQYAEVSLDIECEKEARTPASVPRISPKPTPQIHASPSPTDKLRGIASTATLNPPRVQTPRTSRPSSSHSPLSISAGQSGVKLERANNMKVFDFVYEDFGVAAVSQMKNARAHCPTRTGKRVGMSRLPLHHVTVRGSAQSTRGCDSPARRPSERTRQPHGLAGGGAPSSIVKTFNAAPPTGITPRRVQFADEVVYSLQLAPAAVPPATAWLTLGGDRKAKPQRLYGKARRALTASNLRILTGLQDIGSNAHGIAGIGRQN* # ORIGINAL: g3541.t1 original gene structure, not modified by PASA NODE_110_length_39053_cov_39.9952 AUGUSTUS gene 26588 29490 . + . ID=g3541;Name=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS mRNA 26588 29490 . + . ID=g3541.t1;Parent=g3541;Name=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 26588 26719 . + . ID=g3541.t1.exon1;Parent=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 26588 26719 . + 0 ID=cds.g3541.t1;Parent=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 26859 27657 . + . ID=g3541.t1.exon2;Parent=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 26859 27657 . + 0 ID=cds.g3541.t1;Parent=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS exon 27794 29490 . + . ID=g3541.t1.exon3;Parent=g3541.t1 NODE_110_length_39053_cov_39.9952 AUGUSTUS CDS 27794 29490 . + 2 ID=cds.g3541.t1;Parent=g3541.t1 #PROT g3541.t1 g3541 MSKRMKNTKHYLSKRIAQLGQTVGQNLGTRKESGLPIDYSLLEDVTKKMQVNYKDVIEKTEKYFRPETTARIRRAVMDSVNVANLKEVEESRLGRLGNAMVKTGNDFRAQTTLGSSFLLAGEMELEIARSFLIFENTAEKKFVDPLDEFLKDNLDQLLSKIKKVQSDRLYLAAQKHKEDKVVRDMKNYDPSIIKHAQEKTAALEQKLEAELSVAEEQMRRLLYELEDTQLEVLVDLLKAQAQFFLHGYETICGVLTNIADKTSRPIESILGNTRTQGSGLTKARALYDYTAANEDEISFSAGDIIMITNTDTGEEGWVEGVINGYSGLLPSQYIEPLSADSLAQQTTNIGGTSQPGPAPLPEEVETPSYGGGDDDTYESIDAVRANMRNKSPGPAPPARVSIPTVEVVAPEVQQAALLQGQLDRSHEAALRRMNAALDDLLQASVQSQSPQFAVNSDGFEQCNDQVISAAQEMVGVAKALVVAGKGTPEQLVKAMDAAVDAIAKLTGDVKWDAHCIPEASDRAALFLSAKGLLQALMALVDASHRASGKDAATADATLKPHQKAMIGAISNVLDSLTKIADNVRKPKEVDPMEAELAEVARAIALAEQQLSGIRQNAEATGIHLPDVHEALVSDAQRLAQSASLLMRAASEAQQSIKAAGGNVVSGEGAYYKDGTWAQGLISAAKAVAAGMSDVVSAANNTVTHGADPISAVAAAKAIAAATAQLVYSSATKNPDRRTQDQLASAGRNVTAATDALVSSVDRRRNADAESAGYPERDLSLAERRARELEAQTHVLKMERELESARTNLADVRKAKYAGAGSAATSNQAPPPAAAQPSNTSAPALPPPQVQRSPSPVPPPAAEDDELMARLRRLRE* # PASA_UPDATE: g3545.t1, single gene model update, valid-1, status:[pasa:asmbl_418,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 37761 38919 . + . ID=g3545;Name=g3545.t1 NODE_110_length_39053_cov_39.9952 . mRNA 37761 38919 . + . ID=g3545.t1;Parent=g3545;Name=g3545.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 37761 37824 . + . ID=g3545.t1.utr5p1;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . exon 37761 37872 . + . ID=g3545.t1.exon1;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . CDS 37825 37872 . + 0 ID=cds.g3545.t1;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . exon 38074 38241 . + . ID=g3545.t1.exon2;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . CDS 38074 38241 . + 0 ID=cds.g3545.t1;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . exon 38436 38657 . + . ID=g3545.t1.exon3;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . CDS 38436 38657 . + 0 ID=cds.g3545.t1;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . exon 38797 38919 . + . ID=g3545.t1.exon4;Parent=g3545.t1 NODE_110_length_39053_cov_39.9952 . CDS 38797 38919 . + 0 ID=cds.g3545.t1;Parent=g3545.t1;3_prime_partial=true #PROT g3545.t1 g3545 MSLPANAITLEHPLVKVPFESLNNVFRKSQKVLEKELSTAASWMNELTSKPERDSKAAVDTLITRLTSLKRKFEELSKEEEVCLESCRVRLEHLSSYGGKGPASASPAEAQKMWEKTRLDRYLVDYMLREGHYETARKLAKGANVEEYVDIDLFVEAQKIEDALLRHDCTQALAWCADNKSRLKKIK # PASA_UPDATE: g3536.t1, single gene model update, valid-1, status:[pasa:asmbl_419,status:12], valid-1 NODE_110_length_39053_cov_39.9952 . gene 267 4911 . + . ID=g3536;Name=g3536.t1 NODE_110_length_39053_cov_39.9952 . mRNA 267 4911 . + . ID=g3536.t1;Parent=g3536;Name=g3536.t1 NODE_110_length_39053_cov_39.9952 . five_prime_UTR 267 268 . + . ID=g3536.t1.utr5p1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 267 605 . + . ID=g3536.t1.exon1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 269 605 . + 0 ID=cds.g3536.t1;Parent=g3536.t1;5_prime_partial=true NODE_110_length_39053_cov_39.9952 . exon 917 1302 . + . ID=g3536.t1.exon2;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 917 1302 . + 2 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 1534 1750 . + . ID=g3536.t1.exon3;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 1534 1750 . + 0 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 1949 2156 . + . ID=g3536.t1.exon4;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 1949 2156 . + 2 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 2375 2583 . + . ID=g3536.t1.exon5;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 2375 2583 . + 1 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 2824 3041 . + . ID=g3536.t1.exon6;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 2824 3041 . + 2 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 3309 3707 . + . ID=g3536.t1.exon7;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 3309 3707 . + 0 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 4064 4108 . + . ID=g3536.t1.exon8;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 4064 4108 . + 0 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 4212 4371 . + . ID=g3536.t1.exon9;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 4212 4371 . + 0 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . exon 4513 4911 . + . ID=g3536.t1.exon10;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . CDS 4513 4883 . + 2 ID=cds.g3536.t1;Parent=g3536.t1 NODE_110_length_39053_cov_39.9952 . three_prime_UTR 4884 4911 . + . ID=g3536.t1.utr3p1;Parent=g3536.t1 #PROT g3536.t1 g3536 TSKPASLTAFLIDQKNNIDNYTTEVEGYISTALTRLAAANVSDQASVDAALANFTSMWQPLAGSSEKVGFEKCGDYFCPIVNCTLPPREIGGRIVTLGNDLLVLDGNQCNTQGTGGGYDCYIDGYYAFNVPSRTWRKVATTGDSTMNTKVQNGKRPPVANFRYPAAVGQTIFDFGGAFRDSTMDWFYYNDVWALDTTTWVWSTVKVSGQPPSPTWSHTMFSVNGSLVVFGGCKSPNLFFNTVYMLSDMTLSAKNAYAVGDGVVSGAVAVDSSFQVFTRDLQNKTLTFGGRQVSAFGFDTSGSTFQGRVIDSGKGFYNVTYQTTQAGRYRLTVKVDLVDIPGSPFDVTVAPGAPVASSSSIVGRASFEPVVGVSSKLTVAINDRFNNRITAMPEPFNVSVEGPTPSSHSVSLNADGLYVIACVFEAMGVYNISVRLQGVDIGYSPFLVTVVTAGTVSSKGASVGAIAGGVVGAFALFALIAISLGCIYARRRERALKADYAQTQLDYHEITFQERIGQGSFGEVYKARFRNTIVAVKVIRLRASQDNESKLSEVSAPHTFNALDIIPMRLSLRPSTDAQSLERESREAREMLAGEIDVMCRLRHPNLLLYMGATRQPKICIVTEFMEMGSVQQLLLTKRIDLPWLRRLGFLVDAARGVAYLHACTPPVLHCDLKCANLLVSANWVVKVADFGLSRFKRPTSNGETFGTLFWMSPEVAAGLACTEKSDTFSFAIMMWEVATRKLPYRGLLETLKDPEEDFIALLIEKNLRPTVPVACPQPFTLLMTACWQRSMVRRKSMSEVVDALEAMMASEQRGSMVHTNVPLFSGDDSIPPEFRTNHTTYSLDRSVVF* # PASA_UPDATE: g13963.t1, single gene model update, valid-1, status:[pasa:asmbl_545,status:3], valid-1 NODE_1145_length_13570_cov_41.3587 . gene 1457 4249 . - . ID=g13963;Name=g13963.t1 NODE_1145_length_13570_cov_41.3587 . mRNA 1457 4249 . - . ID=g13963.t1;Parent=g13963;Name=g13963.t1 NODE_1145_length_13570_cov_41.3587 . five_prime_UTR 4182 4249 . - . ID=g13963.t1.utr5p1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 4047 4249 . - . ID=g13963.t1.exon1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 4047 4181 . - 0 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 3736 3795 . - . ID=g13963.t1.exon2;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 3736 3795 . - 0 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 3252 3441 . - . ID=g13963.t1.exon3;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 3252 3441 . - 0 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 2972 3035 . - . ID=g13963.t1.exon4;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 2972 3035 . - 2 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 2644 2807 . - . ID=g13963.t1.exon5;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 2644 2807 . - 1 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 2254 2426 . - . ID=g13963.t1.exon6;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 2254 2426 . - 2 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 1875 1959 . - . ID=g13963.t1.exon7;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 1875 1959 . - 0 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . exon 1457 1649 . - . ID=g13963.t1.exon8;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . CDS 1549 1649 . - 2 ID=cds.g13963.t1;Parent=g13963.t1 NODE_1145_length_13570_cov_41.3587 . three_prime_UTR 1457 1548 . - . ID=g13963.t1.utr3p1;Parent=g13963.t1 #PROT g13963.t1 g13963 MSASLFPGAGASGSRKLVEFIAGKMIMEGNTVRPDTRKGLVYVHQGDDTLMHFCWKDRTTNTVEDDLIMFPESIEFEKINKSNGRVYILRFRGSDKKMFFWMQSKKADKDEENCRKVNFVINNPPIPGVPYDMSAALANASGSEDVAMELDEPAGVETHHGIDVVAQPPAGPPTMGENPAPVPEPDPRGVDLRDLVRMWNERQAGGHHQSDVDLSAVLTPEAIVPLLANPEARERLLRHIPDNLPRSPEELRNLLHSPQFTQALHSFNAALQSGQLAPMMSQFGVDNAPPGVEAFLRALQQQASRGDRQEGGESNDNNKMDES* # PASA_UPDATE: g13964.t1, single gene model update, valid-1, status:[pasa:asmbl_548,status:3], valid-1 NODE_1145_length_13570_cov_41.3587 . gene 5086 9302 . + . ID=g13964;Name=g13964.t1 NODE_1145_length_13570_cov_41.3587 . mRNA 5086 9302 . + . ID=g13964.t1;Parent=g13964;Name=g13964.t1 NODE_1145_length_13570_cov_41.3587 . five_prime_UTR 5086 5149 . + . ID=g13964.t1.utr5p1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 5086 5249 . + . ID=g13964.t1.exon1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 5150 5249 . + 0 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 5537 5622 . + . ID=g13964.t1.exon2;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 5537 5622 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 5781 5883 . + . ID=g13964.t1.exon3;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 5781 5883 . + 0 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 6137 6245 . + . ID=g13964.t1.exon4;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 6137 6245 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 6449 6527 . + . ID=g13964.t1.exon5;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 6449 6527 . + 1 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 6681 6870 . + . ID=g13964.t1.exon6;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 6681 6870 . + 0 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 7114 7265 . + . ID=g13964.t1.exon7;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 7114 7265 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 7458 7596 . + . ID=g13964.t1.exon8;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 7458 7596 . + 0 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 7848 7988 . + . ID=g13964.t1.exon9;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 7848 7988 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 8195 8329 . + . ID=g13964.t1.exon10;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 8195 8329 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 8535 8603 . + . ID=g13964.t1.exon11;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 8535 8603 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 8894 8909 . + . ID=g13964.t1.exon12;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 8894 8909 . + 2 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . exon 9070 9302 . + . ID=g13964.t1.exon13;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . CDS 9070 9172 . + 1 ID=cds.g13964.t1;Parent=g13964.t1 NODE_1145_length_13570_cov_41.3587 . three_prime_UTR 9173 9302 . + . ID=g13964.t1.utr3p1;Parent=g13964.t1 #PROT g13964.t1 g13964 MDAKFTIDYVSKAYDETIIPALVEYVKIPNQSPAYDPEWATNGYMDKAIDLMVSWVRSQNVEGLTLDILREPGRTPLIFMEIPGTAEKKDVTVLLYGHMDKQPPFEGWTEGLGPYTPVIKDGKLYGRGGADDGYAIFSSVLAIKTCRAQNVPHARCVVLIEACEESGSLDLEHYVAVLAGRIGKPSLIVCLDSGAGNYDQMWVTTSLRGIVAGNLRVQILNEGVHSGDASGIVPSSFRIARQLISRLEDESTGTIRPADFFVEVPAQRVSQATVVADILKDEVWDKYPYVKGAGPVHKERTELILNRTWRPALSVTGAHGFPPLQIAGNVLRPESAFKLSLRIPPRLEPAAATEALRKLLEENPPYGAKVTFEAEKEAPGWDAPPLAKWLEDSAEKACVSFFGKPPCYMGEGGSIPFMGMLGAKFPEAQFLITGVLGPMSNAHGPNEFLEINFTKRITSCVAHILADFAKVHA* # PASA_UPDATE: g13966.t1, single gene model update, valid-1, status:[pasa:asmbl_546,status:12], valid-1 NODE_1145_length_13570_cov_41.3587 . gene 11442 13449 . - . ID=g13966;Name=g13966.t1 NODE_1145_length_13570_cov_41.3587 . mRNA 11442 13449 . - . ID=g13966.t1;Parent=g13966;Name=g13966.t1 NODE_1145_length_13570_cov_41.3587 . five_prime_UTR 13380 13449 . - . ID=g13966.t1.utr5p1;Parent=g13966.t1 NODE_1145_length_13570_cov_41.3587 . exon 13019 13449 . - . ID=g13966.t1.exon1;Parent=g13966.t1 NODE_1145_length_13570_cov_41.3587 . CDS 13019 13379 . - 0 ID=cds.g13966.t1;Parent=g13966.t1 NODE_1145_length_13570_cov_41.3587 . exon 11442 12880 . - . ID=g13966.t1.exon2;Parent=g13966.t1 NODE_1145_length_13570_cov_41.3587 . CDS 11730 12880 . - 2 ID=cds.g13966.t1;Parent=g13966.t1 NODE_1145_length_13570_cov_41.3587 . three_prime_UTR 11442 11729 . - . ID=g13966.t1.utr3p1;Parent=g13966.t1 #PROT g13966.t1 g13966 MALLGKGAAVVAAVCAVLLVCANASPAYTTAEIEYANAFEKVVESVRAEGGDRKFSETLTGANYDACINPLILVPGLGGCVLDFKVDETFEMPHSICKSVYTPNEWSSGLNRLWPALSALDVIPPNLYRDCWLEAIAMQYNETTGRFSSAKGLEARGRDYGGLDGVTNLFEIYKKWGPKMSAVYEKLVGRLDGTGYVAGKNLRGVPYDFRRVADDVAVSEMFAQLKAEIEAAYEQTRDCATGPKKANVMSHSLGGPYFLYFLNTFVDQAWKDTYIKSFIPVSSPWVGAGKALRALISGDSEGLPGYNVDFLPAERLMGGLMWMAPYETHFGAKKFIKVGDRTFTSNPEDLAALFSGIAPERADVVNIIKKHIVSRYNIQAPNVPVYCLYGHGIVTEDFYEYESFDKMNTNPTNYRETPAGNATADGLPPAKCKMPVTGDMLTDPEQGDGTAPLPSLTKCGDWDGKNAGHPVVLKSFSGHEHLEILSETPFLDYAIALLQQLQG* # ORIGINAL: g13962.t1 original gene structure, not modified by PASA NODE_1145_length_13570_cov_41.3587 AUGUSTUS gene 238 1086 . - . ID=g13962;Name=g13962.t1 NODE_1145_length_13570_cov_41.3587 AUGUSTUS mRNA 238 1086 . - . ID=g13962.t1;Parent=g13962;Name=g13962.t1 NODE_1145_length_13570_cov_41.3587 AUGUSTUS exon 968 1086 . - . ID=g13962.t1.exon1;Parent=g13962.t1 NODE_1145_length_13570_cov_41.3587 AUGUSTUS CDS 968 1086 . - 0 ID=cds.g13962.t1;Parent=g13962.t1 NODE_1145_length_13570_cov_41.3587 AUGUSTUS exon 238 694 . - . ID=g13962.t1.exon2;Parent=g13962.t1 NODE_1145_length_13570_cov_41.3587 AUGUSTUS CDS 238 694 . - 1 ID=cds.g13962.t1;Parent=g13962.t1 #PROT g13962.t1 g13962 MSSAFKNAAKAHRRTHKERAQPTARARFGLLEKKKDYVLRARDFHSKERRIKALKQKAAFRNPDEFYFKMVNSKTKEGVHVLGKDESLSADMLKVFKTQDISYLNYKLSTERKKIDGLQANLHLIGHAGAEDDDGDDELGGGGGMGRPKHTVFVDSKKEAESFDPAEYLDTLPELVDRAFNRPRIETLRTQK # PASA_UPDATE: g13965.t1, single gene model update, valid-1, status:[pasa:asmbl_549,status:3], valid-1 NODE_1145_length_13570_cov_41.3587 . gene 9512 11299 . + . ID=g13965;Name=g13965.t1 NODE_1145_length_13570_cov_41.3587 . mRNA 9512 11299 . + . ID=g13965.t1;Parent=g13965;Name=g13965.t1 NODE_1145_length_13570_cov_41.3587 . five_prime_UTR 9512 9589 . + . ID=g13965.t1.utr5p1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . exon 9512 9647 . + . ID=g13965.t1.exon1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . CDS 9590 9647 . + 0 ID=cds.g13965.t1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . exon 9975 10049 . + . ID=g13965.t1.exon2;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . CDS 9975 10049 . + 2 ID=cds.g13965.t1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . exon 10372 10464 . + . ID=g13965.t1.exon3;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . CDS 10372 10464 . + 2 ID=cds.g13965.t1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . exon 10708 10883 . + . ID=g13965.t1.exon4;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . CDS 10708 10883 . + 2 ID=cds.g13965.t1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . exon 11125 11299 . + . ID=g13965.t1.exon5;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . CDS 11125 11214 . + 0 ID=cds.g13965.t1;Parent=g13965.t1 NODE_1145_length_13570_cov_41.3587 . three_prime_UTR 11215 11299 . + . ID=g13965.t1.utr3p1;Parent=g13965.t1 #PROT g13965.t1 g13965 MVVTTRSRGMSDPPFKHVNADGSVQKFILKHGKGDRPLKDAHGRVRYIARRANGTVLSATKPGDHPFEFQLNKGHVLPGWDIAVASMQRGEMATFRVESKHAYGKAGVDDGQTHIDPHETLEYEFELVDWEVKSGAAFLELFLITAIVGLGAYMYLVVDLLDA* # ORIGINAL: g3101.t1 original gene structure, not modified by PASA NODE_8228_length_381_cov_30.7026_potentialcontaminant AUGUSTUS gene 72 336 . - . ID=g3101;Name=g3101.t1 NODE_8228_length_381_cov_30.7026_potentialcontaminant AUGUSTUS mRNA 72 336 . - . ID=g3101.t1;Parent=g3101;Name=g3101.t1 NODE_8228_length_381_cov_30.7026_potentialcontaminant AUGUSTUS exon 72 336 . - . ID=g3101.t1.exon1;Parent=g3101.t1 NODE_8228_length_381_cov_30.7026_potentialcontaminant AUGUSTUS CDS 72 336 . - 0 ID=cds.g3101.t1;Parent=g3101.t1 #PROT g3101.t1 g3101 MYLLLYTSSILEYIYDANYIATKFLDLANDQTKDINGNISAVSTEFTNYINTFEFRTAKAFLTAWYLFPVIKAKVDDVVANAANSEFK # ORIGINAL: g505.t1 original gene structure, not modified by PASA NODE_4031_length_2312_cov_41.1766 AUGUSTUS gene 1506 2027 . + . ID=g505;Name=g505.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS mRNA 1506 2027 . + . ID=g505.t1;Parent=g505;Name=g505.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS exon 1506 2027 . + . ID=g505.t1.exon1;Parent=g505.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS CDS 1506 2027 . + 0 ID=cds.g505.t1;Parent=g505.t1 #PROT g505.t1 g505 MDSAGMGGPEDFARWARMLSQLVDLDTRQRQANADIERKRLDNEAESKRFDVEVQKKKIDADAEVAKKKIDAELEMRRMDAEVEKRRLDVEMEKIKLERERFLRACGCASAGNEMAGQGVDVDAAERGASAVSCAVVKQTSTSLCVCESPEPLSDDIVHVGYESPDSLPAKQY* # ORIGINAL: g504.t1 original gene structure, not modified by PASA NODE_4031_length_2312_cov_41.1766 AUGUSTUS gene 124 1108 . - . ID=g504;Name=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS mRNA 124 1108 . - . ID=g504.t1;Parent=g504;Name=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS exon 1050 1108 . - . ID=g504.t1.exon1;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS CDS 1050 1108 . - 0 ID=cds.g504.t1;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS exon 739 858 . - . ID=g504.t1.exon2;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS CDS 739 858 . - 1 ID=cds.g504.t1;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS exon 513 568 . - . ID=g504.t1.exon3;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS CDS 513 568 . - 1 ID=cds.g504.t1;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS exon 124 227 . - . ID=g504.t1.exon4;Parent=g504.t1 NODE_4031_length_2312_cov_41.1766 AUGUSTUS CDS 124 227 . - 2 ID=cds.g504.t1;Parent=g504.t1 #PROT g504.t1 g504 MASNVDFMASYKAISAKLKKRLMRKPNYGEAIEQFSELQNLILREGNTPYAAFCALAVARCEQALGNGLGEADKAAKAGQLYMEAEMDYAEMNYPSFEQYAVEAVHCYLLAIE # PASA_UPDATE: g5997.t1, single gene model update, valid-1, status:[pasa:asmbl_8150,status:12], valid-1 NODE_5556_length_804_cov_27.6571 . gene 2 633 . + . ID=g5997;Name=g5997.t1 NODE_5556_length_804_cov_27.6571 . mRNA 2 633 . + . ID=g5997.t1;Parent=g5997;Name=g5997.t1 NODE_5556_length_804_cov_27.6571 . five_prime_UTR 2 2 . + . ID=g5997.t1.utr5p1;Parent=g5997.t1 NODE_5556_length_804_cov_27.6571 . exon 2 76 . + . ID=g5997.t1.exon1;Parent=g5997.t1 NODE_5556_length_804_cov_27.6571 . CDS 3 76 . + 0 ID=cds.g5997.t1;Parent=g5997.t1;5_prime_partial=true NODE_5556_length_804_cov_27.6571 . exon 202 633 . + . ID=g5997.t1.exon2;Parent=g5997.t1 NODE_5556_length_804_cov_27.6571 . CDS 202 633 . + 1 ID=cds.g5997.t1;Parent=g5997.t1;3_prime_partial=true #PROT g5997.t1 g5997 QQARSFLGLGGSGQDGTIVLLQKFKAYFGEGVALYFAWMDTYCMWLTFPAAVGVLVWLIDSANMDTSVIMPTYAALVIVWAALFLRFWERASATYAHTWNTRETKEKADLVRLAFYGEPRKSPVTGAEEVHFPLWKRRVRQLCSGAITLMMLTVALGVMFVLLNLQGL # ORIGINAL: g14288.t1 original gene structure, not modified by PASA NODE_4233_length_1970_cov_43.6327 AUGUSTUS gene 1106 1870 . + . ID=g14288;Name=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS mRNA 1106 1870 . + . ID=g14288.t1;Parent=g14288;Name=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS exon 1106 1142 . + . ID=g14288.t1.exon1;Parent=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS CDS 1106 1142 . + 0 ID=cds.g14288.t1;Parent=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS exon 1334 1398 . + . ID=g14288.t1.exon2;Parent=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS CDS 1334 1398 . + 2 ID=cds.g14288.t1;Parent=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS exon 1751 1870 . + . ID=g14288.t1.exon3;Parent=g14288.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS CDS 1751 1870 . + 0 ID=cds.g14288.t1;Parent=g14288.t1 #PROT g14288.t1 g14288 MDNSKVNMGGFWGLAIEPEKQYSQTVPQTFKLTMAALDAKAKSNDRTTLVVRVKKVEHPLCTLTAGKVRTSST* # ORIGINAL: g14287.t1 original gene structure, not modified by PASA NODE_4233_length_1970_cov_43.6327 AUGUSTUS gene 321 467 . - . ID=g14287;Name=g14287.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS mRNA 321 467 . - . ID=g14287.t1;Parent=g14287;Name=g14287.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS exon 321 467 . - . ID=g14287.t1.exon1;Parent=g14287.t1 NODE_4233_length_1970_cov_43.6327 AUGUSTUS CDS 321 467 . - 0 ID=cds.g14287.t1;Parent=g14287.t1 #PROT g14287.t1 g14287 MTVELEALRKAANEQAEVVRKLKAEKASKDDVTRAVEELKKLKKAVEDK # ORIGINAL: g155.t1 original gene structure, not modified by PASA NODE_981_length_15100_cov_42.0377 AUGUSTUS gene 664 7717 . - . ID=g155;Name=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS mRNA 664 7717 . - . ID=g155.t1;Parent=g155;Name=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 7669 7717 . - . ID=g155.t1.exon1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 7669 7717 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 7077 7353 . - . ID=g155.t1.exon2;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 7077 7353 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 6648 6873 . - . ID=g155.t1.exon3;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 6648 6873 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 6353 6547 . - . ID=g155.t1.exon4;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 6353 6547 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 6147 6259 . - . ID=g155.t1.exon5;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 6147 6259 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 6022 6065 . - . ID=g155.t1.exon6;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 6022 6065 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 5834 5899 . - . ID=g155.t1.exon7;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 5834 5899 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 5671 5696 . - . ID=g155.t1.exon8;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 5671 5696 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 5445 5564 . - . ID=g155.t1.exon9;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 5445 5564 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 5248 5342 . - . ID=g155.t1.exon10;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 5248 5342 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 5111 5132 . - . ID=g155.t1.exon11;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 5111 5132 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 4791 5031 . - . ID=g155.t1.exon12;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 4791 5031 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 4610 4704 . - . ID=g155.t1.exon13;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 4610 4704 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 4418 4521 . - . ID=g155.t1.exon14;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 4418 4521 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 4282 4339 . - . ID=g155.t1.exon15;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 4282 4339 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 4122 4175 . - . ID=g155.t1.exon16;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 4122 4175 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3994 4027 . - . ID=g155.t1.exon17;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3994 4027 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3835 3895 . - . ID=g155.t1.exon18;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3835 3895 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3621 3688 . - . ID=g155.t1.exon19;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3621 3688 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3443 3528 . - . ID=g155.t1.exon20;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3443 3528 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3308 3340 . - . ID=g155.t1.exon21;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3308 3340 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 3153 3203 . - . ID=g155.t1.exon22;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 3153 3203 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 2860 3023 . - . ID=g155.t1.exon23;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 2860 3023 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 2647 2756 . - . ID=g155.t1.exon24;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 2647 2756 . - 1 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 2393 2517 . - . ID=g155.t1.exon25;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 2393 2517 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 2069 2299 . - . ID=g155.t1.exon26;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 2069 2299 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 1641 1716 . - . ID=g155.t1.exon27;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 1641 1716 . - 0 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 1403 1509 . - . ID=g155.t1.exon28;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 1403 1509 . - 2 ID=cds.g155.t1;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 664 1287 . - . ID=g155.t1.exon29;Parent=g155.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 664 1287 . - 0 ID=cds.g155.t1;Parent=g155.t1 #PROT g155.t1 g155 MLGVGGGLGLRAVSELPPTGSGKTVLFELAILRLIMRARDSPGLLAKTKAVYMAPIKALCSERFDDWKAKFEPLGLSCKELTGDSDVEDYYELRGANLILTTPASGPLIRQKSRHIHCAQVDEIHTLNDVTRGATIEAVVSRMKTVQSHADACRKQQEELPADDAFESSVRFVAVSATIPNIDDLAEWLGRPGQPAVYRKMDPSLRPVPLTVEVLGYPDANNAFKFDMNLNYKLFDIVKTRGNNKPALIFCSTRKSVQQAAAQLQKSAVEARRMEDRFVKTPEMRQRLQKISVSIKEKALKGLDMSDRKLIEKTFIEGDLPVLCATSTLAMGVNLPAHLVVIKSTEHYEGGMVCEYTESQVLQMMGRAGRPQFDTSATAVIMTKFSCKRKYESLASGSEVIESSLHLNLIEHINAEVVLNTITDVSVALDWIKSTFLFVRIRKNPVRYDLPRDFTREQMEHRLQTLCLDSLKELAQYELAVMDDDMGLMPTDTGKLLARYCVAFATMKGFITSLPPRPTLQQLLDIFSNANEFKDMRLRLTEKRVLNDINTSKDKPIRYPIKGKIKTTEQKISCLIQATLGGVAIADFSLSQDRERIFRAGTRIAKCLAEYVSTKNDFEAVIQASTLSRCMRVRLWENSTLVAKQIEKIGEKLASLLANAGLASFEKLEETSSTTIELVVGRNPPFGAQVREAVSRIPRFCIELEQLGDPTMNSAELELRISIANHDRIFEEGIGRPSHGSLIVAVGDKTSGDLVFHKRIMESMFAQSPVWTRKISVARSEDADETEVTVRLIHEGLVGVDRDIRFQPSYLPDPEMRKRAALKKRAARQKAEERRVPDMDNYESGTDADDVGMALLEGVASIEEYGSLTRGAVYFQQDGEAGNFDVTWELRDDDDAIDGKLSTFNLMYCSRKQETEDDLESNKGKKTRVSKPRAKPETAKKVSSEGARALELQRAKQVAVTQQQPLATTARMKLDKKPQTVASAPPSSRAVDLRVDATHTDIVPQTCTDTARAHKPSATGGPSVATRATAISSRGATAQPHSHPSAQTPAARGTQWPPQSGYEAAGHAPFAYQGNHLHGGPYGMSGYHASGHIVHGGGHDAVGDFSRMAASFAYQGGGAAAVRRVPPTHGGGRGAHNAPRDAQFGASPQSMYSGYNGYDHIHGSAYVSAPTARNCDDLFAGIFD* # PASA_UPDATE: g156.t1, single gene model update, valid-1, status:[pasa:asmbl_10220,status:12], valid-1 NODE_981_length_15100_cov_42.0377 . gene 8752 9746 . - . ID=g156;Name=g156.t1 NODE_981_length_15100_cov_42.0377 . mRNA 8752 9746 . - . ID=g156.t1;Parent=g156;Name=g156.t1 NODE_981_length_15100_cov_42.0377 . exon 9675 9746 . - . ID=g156.t1.exon1;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . CDS 9675 9746 . - 0 ID=cds.g156.t1;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . exon 9350 9478 . - . ID=g156.t1.exon2;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . CDS 9350 9478 . - 0 ID=cds.g156.t1;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . exon 8752 9227 . - . ID=g156.t1.exon3;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . CDS 8853 9227 . - 0 ID=cds.g156.t1;Parent=g156.t1 NODE_981_length_15100_cov_42.0377 . three_prime_UTR 8752 8852 . - . ID=g156.t1.utr3p1;Parent=g156.t1 #PROT g156.t1 g156 MVALSSVREVARREVENRWGSLAQGFYRHLDEAQIRSAYSTRVAGEPSVTFHFEHLPEEEFEDKIYEAILKCLSSNEGVYVLEDQHECFIYFPHLKEERSDEVPDFWPYVFCDGEGRDVLSERGTWAMRSKGWSGAGGDTLSLSFTASGASFLQALAEDPPILLQTRRARASSDAPEVARLASQRDFEWPH* # ORIGINAL: g157.t1 original gene structure, not modified by PASA NODE_981_length_15100_cov_42.0377 AUGUSTUS gene 10134 12128 . + . ID=g157;Name=g157.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS mRNA 10134 12128 . + . ID=g157.t1;Parent=g157;Name=g157.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS exon 10134 12128 . + . ID=g157.t1.exon1;Parent=g157.t1 NODE_981_length_15100_cov_42.0377 AUGUSTUS CDS 10134 12128 . + 0 ID=cds.g157.t1;Parent=g157.t1 #PROT g157.t1 g157 MGTPSPVSFSSLPIEIIEYHFVPFLSNRDLASLAGVNSRLRCVLKHVRVYRLRRGFAKQYWESAAFRNAVWDDIPRERLELDLNRVQSVRGDLSALGGVHSLILSECYGVTDVSALSGVHSLNLSGCKGVVVVSALGGVHSLNLSGCEGVTDVSALGGVHSLNLSHCERVVDVFSLGGVHSLTLYFCSRVIDVSALGGVHSLTISFCRRVIDVSALGCVRSLNLSGCNGVVDVSALGGVHSLDLSFSQGMTDVSALGGVHSLDLSRCTQVIDVSALGAVHSLNLSNCKEMTDVSALGAIHSLNLACCEGVTDVSALGGVHSLNLACCEGVTDVSALGGVHSLILSECYGVTDVSALGGVHSLNLSYCGGVTDVSALGGVHSLNLSYCGGVTDVSALYCVHSLNLRNCRGVADVSALGGVHSLNLSHCKRVTDVSALGGVHSLNLSHCKDVTDVSALGGVHTLNLSDCERVTGVSALGGVHSLNLTRCKGVTDVSALGGVRWLDLSYCKGVTDVSALGGVHSLNLWNCYGVTDVSGLGGVHSLYISCCQGLTDVSALGGVHSLIVRYCDGVTNVSALGGVHSLDLSNCEGVTEVSALGALHSLNLSHCKRVTDVSALGRVHSLDLSHCEGVTDVSALGGVHSLHLSHCKGVTDVSALGDVHSLYR* # PASA_UPDATE: g12009.t1, single gene model update, valid-1, status:[pasa:asmbl_5925,status:12], valid-1 NODE_3359_length_3653_cov_38.059 . gene 37 3494 . + . ID=g12009;Name=g12009.t1 NODE_3359_length_3653_cov_38.059 . mRNA 37 3494 . + . ID=g12009.t1;Parent=g12009;Name=g12009.t1 NODE_3359_length_3653_cov_38.059 . five_prime_UTR 37 37 . + . ID=g12009.t1.utr5p1;Parent=g12009.t1 NODE_3359_length_3653_cov_38.059 . exon 37 235 . + . ID=g12009.t1.exon1;Parent=g12009.t1 NODE_3359_length_3653_cov_38.059 . CDS 38 235 . + 0 ID=cds.g12009.t1;Parent=g12009.t1;5_prime_partial=true NODE_3359_length_3653_cov_38.059 . exon 805 1665 . + . ID=g12009.t1.exon2;Parent=g12009.t1 NODE_3359_length_3653_cov_38.059 . CDS 805 1665 . + 0 ID=cds.g12009.t1;Parent=g12009.t1 NODE_3359_length_3653_cov_38.059 . exon 2019 3494 . + . ID=g12009.t1.exon3;Parent=g12009.t1 NODE_3359_length_3653_cov_38.059 . CDS 2019 3494 . + 0 ID=cds.g12009.t1;Parent=g12009.t1 #PROT g12009.t1 g12009 EMAACGVIPILLSCTRNEDAEIVYWALGLIHEMAQRDVARDIIRDLPTSLGLLAHVLANGDAGVQRIVLRTLGFLAIKNDIFKRKILASAIPQRLAISLASGDHECAHWAIVLAHDLAMIGESATEVFLTTPGLCNAMWQLAARLEGPSLRLLAETVGFLASVDSLHARLVDAGMLAAVKKFASCEDHDLNFWAAALLLNLAMTSDAIKEKIAEHSGCVRALIDLAIKDMTSDEEVTQGDARSENHIRGMAAKALVMVGLVCDGTNEAVSNEILRPLMTHIASVSAGTQLNRAEDISLLSVFARSDALKSVVASNTALIGCLGEMLTCLVVRIGLPSWLLMEKDFVFDHGLAAVRVLASLAPHPGCAPSLIAQDIPYALASLLFCLCSTNPQRLVTAAACTSIGLPPAGPMATSSSSRPVTPQSPRIGQATGHVSAERGTGIGIGNGSVPTTPRQSSHDDPADAEVVTSAGSMTAIDASDGGLSPAIIELRQLASLALASLTTFSVAQAKAIARARTKGEEADSNGGTVEAPLLQHGYAPAAMWSVALRFGRTNPAVAFHSMCALASIGGGSGIALPLMSAPGASPGDGVLALGSLIDQAGVQVHSPRERAVTLPAPDAGEMSPRRTHSPRLRSDSSPVMSTGRRSSRPPPLRLPPAVSVPPATLEQAMTLAASVELQFARMEMSPYDRTAALFIGPDGLTVRNDSWTFESARATLWVGGVSPAAACGDAAVHAGEGVAVAPFATDNGGVECGDNAQRARVNVMERPEVTKSPAVVNGIGGRWYYEVTVMSEHIIQVGWASSLCEYHPIRGIGVGDDDHSYSFDGYRCRAWHGSCVVDTVGAVA* # ORIGINAL: g1707.t1 original gene structure, not modified by PASA NODE_571_length_21008_cov_44.5339 AUGUSTUS gene 127 2162 . - . ID=g1707;Name=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS mRNA 127 2162 . - . ID=g1707.t1;Parent=g1707;Name=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 2139 2162 . - . ID=g1707.t1.exon1;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 2139 2162 . - 0 ID=cds.g1707.t1;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 1864 1983 . - . ID=g1707.t1.exon2;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 1864 1983 . - 0 ID=cds.g1707.t1;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 491 1516 . - . ID=g1707.t1.exon3;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 491 1516 . - 0 ID=cds.g1707.t1;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 127 362 . - . ID=g1707.t1.exon4;Parent=g1707.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 127 362 . - 0 ID=cds.g1707.t1;Parent=g1707.t1 #PROT g1707.t1 g1707 MSRGEQVDCNTPVWMNQLKKNHLMDSVVACWRTISDAIDGKITEPPQKLVTERPPPHISQVEGVQINHGDVIMRDDAAQSAAPIATPADVAAGAVNGSRNSESHTDVSDSLKRDKSADSRKRKLSQHVHQNDDGDDGDACGADARSLERGSEREKENIATAIDNSAGHRMAKKKSKTAPTAVSAPVPAPLPDLAVEGCEEPRRVTDAKKSKQDKRSRVQAIDCESSASAPVSRATPATDPALATDGKEGRRAQVSDPAEVDTVDADGSDIPTDWACATCTFVNKPRRKTCQICNGARKGSASAGTKGKASSHRQAQTSTPSAASRREASPVISVGGSGRKPVSMFVLPRNVRGETPLHTAAIRGRLDSLREWIEKGADVDARDNAGWTPLHEACAHKRLDAAQLLLESGASVNAAGMGGDTPLHDAASTAAMDLLRLLLQFGADPHGKNAQGKSPLDVALSEEVKQVL # ORIGINAL: g1711.t1 original gene structure, not modified by PASA NODE_571_length_21008_cov_44.5339 AUGUSTUS gene 14228 20745 . - . ID=g1711;Name=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS mRNA 14228 20745 . - . ID=g1711.t1;Parent=g1711;Name=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 20582 20745 . - . ID=g1711.t1.exon1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 20582 20745 . - 0 ID=cds.g1711.t1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 20181 20277 . - . ID=g1711.t1.exon2;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 20181 20277 . - 1 ID=cds.g1711.t1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 19665 19805 . - . ID=g1711.t1.exon3;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 19665 19805 . - 0 ID=cds.g1711.t1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 19311 19409 . - . ID=g1711.t1.exon4;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 19311 19409 . - 0 ID=cds.g1711.t1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 15498 18975 . - . ID=g1711.t1.exon5;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 15498 18975 . - 0 ID=cds.g1711.t1;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 14228 15255 . - . ID=g1711.t1.exon6;Parent=g1711.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 14228 15255 . - 2 ID=cds.g1711.t1;Parent=g1711.t1 #PROT g1711.t1 g1711 MMGGEGESRGVVPRLCEELFAQAANKSATEATRCTIEATYIEIYNESVRDLLNPGGKERLRVREHATLGPYVEGLSVAAVGTWADMQAVLSEGNRVRTVGATNMNAESSRSHSVFTITLSQSRVDTQTQLTCETVSRLSLVDLAGSERVNRTGATGDRLKEAGSINKSLTTLGLVISALADASGLPSTPNAKKPFVPYRDSVLTWLLKECLGGNARTAMIATISPSSDSYEETLSTLRYADRAKRIVNRPVVNEDPNARIVRELREEVARLRSLLESGGGAGANSRASTQSPAASAKETAELRRTADAAAAEAERLRLELFERERLVESLSRTWEEKLRITEGVHVTRQRALAEVAAALSGDAPCLLGTCGGHFVAIRITARPRVVGSSPPDDDFCDATEIPVDGVLPAHFCIQKAGDCVLLTPYSGAYVAVNGQVASEDLPVPLEHGDVVSISEQCELRLNVPDKHAVLSGTQSASAAAVDDVSTMLDPAPLVPLLGAPAIDPEETQRTIDAALERQREVYERRIAELEKASEEASIVRRSEHPDPLDDRSDGSPSGSGSRKDRRNSGSGSGSGRRASAGGDSMDRGPRGSSGRSSSGSSRRTSGVSVISTTDESLSSSGASDESSTSPAEAPSEVLASTVVESVSREHGLADHRDLTAAPKPEFVVVGNTPRRVTDGQSAATTDTPSAEKVIVCAESDEDSDTADAFVAQENTQIRVTGDHSSTSSPGTGVEAVHSSHLAGNSVDLDNMKAVISQASNVTLEREDGDVVNVRVTDDCTEQSHDAHRQFNDVECALNEVSDRSATSVTSLACAPETSSVATTERPNTDAHRTALLLSAESDLREAVSLARSINMLGQNGRVVKARLRIPLALLVLGGAAAVGDGMSAIARAVPEVCAEVIAEGFGTVAVWSLDKLRAHASTVRTEQAGGVPLSPSVLSTPQRADRPVTPLSPSPTGSPRTPRGSSPQSLSSASVDDASDHVLVGCAAFHLVPLPPLLDGEGRVSATDCRTVLVEAPIVDPFGMLQGRVRAQLTWRDGRTASYAGGDDAASESAAAGTSVCEAMFSVMGADGIPSHAAGYIYCKYTLPKLRDAECLVPQASPASASTSGGKNVEFAHAPTSEFFPVLRPAVVTVQLWGHPGPHLWRRRESRRASFHVPLSASALTGSMATATPPKSAASGAEPQESTLGARLTRLMERWSALRVWVEVLERDSAGAWNAVAVREREDVGCGGVYRIRQGHSRRIAVSVSTALGDADEDADDPTHIDSVFCVRAGCVSRGSKRDSATTRFDSRVTAEVRRVRVLRARMLEAHRIFLDGELHRVTERRVKTREEAEREVALIEDWMELIRLRNDYVTHIAYGDPASAVSDPLDTALHGTAGSLVPDDESGMETNIVTVVHAQGGASVSETSDSTARSRPLRPARTGIDTMSSKGQHGAIAGSEYDFTRDIDADPSCTWPDGCTPQGMSRQLKLLPGSDGDASSRNSSISAGGSCARVVCAWDSTLDDDPALSCVTPPGERVYLWVQIALRLSGSHTPLYLWKRLCLKVRSGPPQRKSIPALIWAAIASPGGLLGSRNPPRYAAGTGAWYRIVCPRDLAPLGGVDGAFVTGTDSAGDEGPAGAGEGTEYAVAFERFRETARRLASLLEMDRLRQELAVSAGTGAAGLRDRA* # PASA_UPDATE: g1710.t1, single gene model update, valid-1, status:[pasa:asmbl_8247,status:12],[pasa:asmbl_8249,status:12],[pasa:asmbl_8250,status:12],[pasa:asmbl_8252,status:12], valid-1 NODE_571_length_21008_cov_44.5339 . gene 8201 13100 . - . ID=g1710;Name=g1710.t1 NODE_571_length_21008_cov_44.5339 . mRNA 8201 13100 . - . ID=g1710.t1;Parent=g1710;Name=g1710.t1 NODE_571_length_21008_cov_44.5339 . exon 12907 13100 . - . ID=g1710.t1.exon1;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . CDS 12907 13100 . - 0 ID=cds.g1710.t1;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . exon 11469 12732 . - . ID=g1710.t1.exon2;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . CDS 11469 12732 . - 1 ID=cds.g1710.t1;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . exon 8498 11242 . - . ID=g1710.t1.exon3;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . CDS 8498 11242 . - 0 ID=cds.g1710.t1;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . exon 8201 8332 . - . ID=g1710.t1.exon4;Parent=g1710.t1 NODE_571_length_21008_cov_44.5339 . CDS 8201 8332 . - 0 ID=cds.g1710.t1;Parent=g1710.t1 #PROT g1710.t1 g1710 MDADVIVSWKHLCGGVHGGGSVGVDESQTVSSTSKFSGDAPLFCVGREDLVRGCIPPGQHSVHYFAFLGRADGSVSWVSLFANAIVHQLTMLGMASATGTLTEPMIRGHVAHIVCASLAHAGHNPRPTVRDALGVLSHVARYYCVECRLIVDGIDYRVFPQHRTDAWGYCMRSLQPIAWVGEVEFLSILPVPPTTTVYTQNATPRVPDAPRGAVNHAWMSEKSAHSSEQKEAPSLVPPYICENSQTATVRPTARPAESGDPVDVCASTAVQIVRSLFKFVWGEDDGAACLRRIMSSPDAAMHAPCIVHEINKFIGGSDHTSRLTGNTAADALSGLAARLAEQWAHPSVAFRLYCEQSVKVSVVNGIFLFACFHRHQLLTRSDVRYDDIMQATSDVGGDVLIAAIRDAVVRRLRVVFDCSRCPNNTAGVRLFLDGASPYAWLFLPPPRLLRSLWVGLHNVDFESTDVIGTVFEALVRDDATAETFGKVYTPRILIDFMLRAAGIDETSTDPADVINVDALCSDNPHEYLQAVKSILDPASGSGCFLAKYASIVVAKIRNIEHVWNSHVLLGRALESICDNVWGMDIDCVAWEASLISMLLQVLPVVCRIRYLCEHTSPVSLPPFNILCGDTMRWFQPIVRPLRAVDRTQPAAVQLATCRLFDFVVGNPPYVARDKFPDAFEGVDGVDFFWDRAWARKAQLYAFFYFYGVVHLKMGGVLAFVTPPSFLSNTHDAAFCEDLITWLTPTDVYIAPRHSFFEVVTEVMVFVGRRRNAVDTHSGSQYVPGFLIPDSAVEGRQFVRENATKCVALWNMGRNARDLHVSRALAGIQPDVVDLKISLIDVRITPDAVRSDAALAREMFQKLKIPGNHTGAGEKTTSSRLHDLSSAWPTKLGAIAKVVTGLKTSNNVFLIFTPERELRGQPPDVVAAYNRFIACLESEGRLIPIYHNEVTLYALSPPVSALLLARKEIAAHGTVAAKYLEFAQKAIDGTLRDADNDGSDAHIVARLKDDLRPPKKGNGPLTSSGHTDRRLDTSRPHILTSKFAASREDSQNRWVRLATVGVKGVTYVDRFNCIQPNLGTAWSDVPTLSAYLNSLLIDAYVRFAQLNAKMGMLQLLSGKLADIPVPDRPSDQLRVCAHALVSRYARVQAIVSTACRASKDPQAIVVLRHVGASFVFVHNKQRITLAEALEMTVSALSLKDLRDAVYTLESINRVSEQQQRKGETTQAFSTRMEASEATTRRCCERLFGREAAAVLGVSVDAVAVCNSDDQAKHFFTALPDDISRATIVELATLLDECARLQAVVDAVVFREVSGMTEAIAQGIARELGYVQPQCVRVHIARSGHAATDAYSSVFVDILNDGADGMVAVGLSSVTGDGKNAHVASTCASSACDSEASRMPSVHPCDDDNNNSKRATADDTSDDEEDAHMAKKHRRTPVSPTISHHT* # ORIGINAL: g1709.t1 original gene structure, not modified by PASA NODE_571_length_21008_cov_44.5339 AUGUSTUS gene 5714 7759 . + . ID=g1709;Name=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS mRNA 5714 7759 . + . ID=g1709.t1;Parent=g1709;Name=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 5714 6588 . + . ID=g1709.t1.exon1;Parent=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 5714 6588 . + 0 ID=cds.g1709.t1;Parent=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 6764 6921 . + . ID=g1709.t1.exon2;Parent=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 6764 6921 . + 1 ID=cds.g1709.t1;Parent=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS exon 7323 7759 . + . ID=g1709.t1.exon3;Parent=g1709.t1 NODE_571_length_21008_cov_44.5339 AUGUSTUS CDS 7323 7759 . + 2 ID=cds.g1709.t1;Parent=g1709.t1 #PROT g1709.t1 g1709 MATEILVCANDIHGELAAAIFSLGAACNHDVTSINVFLSNENACIDTARHRACVYVNDFLEFDVRLWERLESSLSPSYNGPNRIVIALPLGCGNDVAARAHALTSICDRDIHVLVVQFDRISAHAIADACILWVESSLVGFEDVDASTSDGAERLHALLGWTPNGPPLCTRFLQLRSHDSRPCINIDFVHEVDCLLGEGAVWDARNKRLLWVDIDTGRVFSMEHQEDHRAKSVPRIFTCVETVGTVVARARGVGFVAATRTSILCADGFDDANPTQTILDVSIHPPHHRLNDGKCDPAGRLIVGSIAADAEYGETGTASLFAVDPDSNAHPTVRTILKNVTVSNGLVWSADGSTMYYIDSPTLCVFAFDYSVATASVSHRRTILRFSSSEGVPDGMAIDADGMLWIAHWEGACVTRNDPATGTVLSVVHVPALRVTSCAFGGPDLDTLYITSARRGLSEDQLRKYPLSGSLFVVRNVGVKGVRSFEYAS* # PASA_UPDATE: g1708.t1, single gene model update, valid-1, status:[pasa:asmbl_8248,status:3], valid-1 NODE_571_length_21008_cov_44.5339 . gene 3454 5194 . + . ID=g1708;Name=g1708.t1 NODE_571_length_21008_cov_44.5339 . mRNA 3454 5194 . + . ID=g1708.t1;Parent=g1708;Name=g1708.t1 NODE_571_length_21008_cov_44.5339 . five_prime_UTR 3454 3633 . + . ID=g1708.t1.utr5p1;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . exon 3454 4226 . + . ID=g1708.t1.exon1;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . CDS 3634 4226 . + 0 ID=cds.g1708.t1;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . exon 4406 4489 . + . ID=g1708.t1.exon2;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . CDS 4406 4489 . + 1 ID=cds.g1708.t1;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . exon 4750 5194 . + . ID=g1708.t1.exon3;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . CDS 4750 4795 . + 1 ID=cds.g1708.t1;Parent=g1708.t1 NODE_571_length_21008_cov_44.5339 . three_prime_UTR 4796 5194 . + . ID=g1708.t1.utr3p1;Parent=g1708.t1 #PROT g1708.t1 g1708 MKLLENTELESMSSSLCFGAPDRRVYGRVESYSCKMAGNDKRVYKQFSTENAASNGSELLALSPPQTTVSPFGPFSVEMCNSKTLFYLTSTLNASFPDYDFTNTRSQSFSKEPSLDLVINSIDTTMFTEMGEEYHRIQPRLWAAIDKEIAVRECSIYSYIPDDDDNPYGEEGSIWSFNYFFYNKRLNRILFFSCRCVSSNAVMAEDEAMDYVDDDIDITEGSGAASGYGYGQQYLDGMRA* # PASA_UPDATE: g2018.t1, single gene model update, valid-1, status:[pasa:asmbl_4634,status:12], valid-1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . gene 411 1212 . - . ID=g2018;Name=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . mRNA 411 1212 . - . ID=g2018.t1;Parent=g2018;Name=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . five_prime_UTR 1204 1212 . - . ID=g2018.t1.utr5p1;Parent=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . exon 919 1212 . - . ID=g2018.t1.exon1;Parent=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . CDS 919 1203 . - 0 ID=cds.g2018.t1;Parent=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . exon 411 661 . - . ID=g2018.t1.exon2;Parent=g2018.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant . CDS 411 661 . - 0 ID=cds.g2018.t1;Parent=g2018.t1;3_prime_partial=true #PROT g2018.t1 g2018 MAAHLVLLGVTSALALFGIFALCIFLWNATNRPLHPFSAKFAVDHKKIPQPGKLRVRCFVKGEECKAASENATRTGECCAREDRPSQSALARMRMPRAVTEETSSWSGATPGTVRIVAWNIERGYRLAEVIDALVKVSPDIVLLNEVDIDCPRSGCVDTGAEIASALGMRIVFANEDD # ORIGINAL: g2019.t1 original gene structure, not modified by PASA NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS gene 1729 5178 . + . ID=g2019;Name=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS mRNA 1729 5178 . + . ID=g2019.t1;Parent=g2019;Name=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 1729 1767 . + . ID=g2019.t1.exon1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 1729 1767 . + 0 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 1887 2077 . + . ID=g2019.t1.exon2;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 1887 2077 . + 0 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 2226 2297 . + . ID=g2019.t1.exon3;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 2226 2297 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 2515 2586 . + . ID=g2019.t1.exon4;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 2515 2586 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 2684 2755 . + . ID=g2019.t1.exon5;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 2684 2755 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 3028 3099 . + . ID=g2019.t1.exon6;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 3028 3099 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 3218 3289 . + . ID=g2019.t1.exon7;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 3218 3289 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 3390 3461 . + . ID=g2019.t1.exon8;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 3390 3461 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 4432 4712 . + . ID=g2019.t1.exon9;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 4432 4712 . + 1 ID=cds.g2019.t1;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS exon 4883 5178 . + . ID=g2019.t1.exon10;Parent=g2019.t1 NODE_2602_length_5724_cov_62.9097_potentialcontaminant AUGUSTUS CDS 4883 5178 . + 2 ID=cds.g2019.t1;Parent=g2019.t1 #PROT g2019.t1 g2019 MENRLSIGRLGCIAGKRRVVSSGVHISFYYCLSALVAVAVCFLCQAEGAVDVCPDTCTCNGEGAVLSCAFRNDNTSLDWSNLQLTSFASGIFDGLSELTDLSLGSNNITTLPSGIFDKLTALTYLDLGSNQIATLPSGIFDKLTALVQLDLDSNQIATLPSGIFDKLTALAHLYLFSNQIATLPSGIFDKLTVLTWLDLGSNQIATLPSGIFDKLTALIWLNVAVCDRFNGDCTVGVSSSGSLAGPVAGGVVGAIAGAVSIVFAIFFVRKQMERKKMDALARSEIDLIDTVVRRPEIAEIEIPGSYIHLRNRIGEGEFGEVYLADITPRSGNVAAIKAALKTFKITTLSSADEIRSARSVFMAEIDLMRTIPKHANIIELIGVCTRVIRPGFVNGMMSSCWIWHSLNAGSIN* # PASA_UPDATE: g3975.t1, single gene model update, valid-1, status:[pasa:asmbl_2699,status:3], valid-1 NODE_1816_length_9110_cov_41.5016 . gene 3157 7153 . + . ID=g3975;Name=g3975.t1 NODE_1816_length_9110_cov_41.5016 . mRNA 3157 7153 . + . ID=g3975.t1;Parent=g3975;Name=g3975.t1 NODE_1816_length_9110_cov_41.5016 . five_prime_UTR 3157 3354 . + . ID=g3975.t1.utr5p1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 3157 3489 . + . ID=g3975.t1.exon1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 3355 3489 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 3665 3793 . + . ID=g3975.t1.exon2;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 3665 3793 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 3945 4138 . + . ID=g3975.t1.exon3;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 3945 4138 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 4332 4473 . + . ID=g3975.t1.exon4;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 4332 4473 . + 1 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 4740 4865 . + . ID=g3975.t1.exon5;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 4740 4865 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 5090 5152 . + . ID=g3975.t1.exon6;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 5090 5152 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 5487 5622 . + . ID=g3975.t1.exon7;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 5487 5622 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 5722 5876 . + . ID=g3975.t1.exon8;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 5722 5876 . + 2 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 6113 6305 . + . ID=g3975.t1.exon9;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 6113 6305 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 6558 6625 . + . ID=g3975.t1.exon10;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 6558 6625 . + 2 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . exon 6951 7153 . + . ID=g3975.t1.exon11;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . CDS 6951 7082 . + 0 ID=cds.g3975.t1;Parent=g3975.t1 NODE_1816_length_9110_cov_41.5016 . three_prime_UTR 7083 7153 . + . ID=g3975.t1.utr3p1;Parent=g3975.t1 #PROT g3975.t1 g3975 MDASELASKQDAARDFLDRHKVPARLERMLNDLVLAKPDDPIAFMYEYFSKELKQPVIDHLVGREVLDSRGNPTVEADVHCIVAGKVKLVARGTAPSGASTGSNEALELRDGNEERYLGKGVTKAAGNVSVLLSQAVSGLSVIDLRGADAALCAADGTELKLNVGGNAITAASFAIAQAGAAISEMPLFEHFARVFKHGNATDSYRMPTPMVNILNGGKHAGGKLKVQEFMIVPSQDTSFREAIRRCATVYHHLGRLLVAKCGPSARNLGDEGGFAPLLDTPEQAIDIILEAIVAAKLKPGTDMFLAMDAAASEFYDKETGKYEIVVGQFKTGDEMVEYWAALCDKYPAIVSIEDGLDEKDYDTWAKLCDRIGRRCMIVGDDLFTTNTNLIKQGLAGKWANALLLKVNQIGTVSESMDAASLMLDAGHNVIVSHRSGESVNSDIADLAVGIGARYIKTGAPARGERVAKYNRLLQIEEILIEKNLLGTKQ* # ORIGINAL: g3974.t1 original gene structure, not modified by PASA NODE_1816_length_9110_cov_41.5016 AUGUSTUS gene 109 1322 . - . ID=g3974;Name=g3974.t1 NODE_1816_length_9110_cov_41.5016 AUGUSTUS mRNA 109 1322 . - . ID=g3974.t1;Parent=g3974;Name=g3974.t1 NODE_1816_length_9110_cov_41.5016 AUGUSTUS exon 1099 1322 . - . ID=g3974.t1.exon1;Parent=g3974.t1 NODE_1816_length_9110_cov_41.5016 AUGUSTUS CDS 1099 1322 . - 0 ID=cds.g3974.t1;Parent=g3974.t1 NODE_1816_length_9110_cov_41.5016 AUGUSTUS exon 109 746 . - . ID=g3974.t1.exon2;Parent=g3974.t1 NODE_1816_length_9110_cov_41.5016 AUGUSTUS CDS 109 746 . - 1 ID=cds.g3974.t1;Parent=g3974.t1 #PROT g3974.t1 g3974 MGGLWGSFRLSLVGIAFILAVSAPNASAFRSACPPLLAGVWTATVDASTNTTSVFSYSCDSVNMNTTVSGALTSSRSFTMRCTKSDDRYSFTLLMSNASSSVRGEFILGGTLLSAQLVLAVGDLDGAAAIISASGVIYNKDVAVPFSGSAYITSALCLADPNDTIFLPAGDYPSIRPAIGPLRFVGEGQDLVKVNYVGTETFTARTKINYENIRFNFASGIPFTLSGASVEFKNCILALGTTSAVVCDTSSFLNITTTTIFGSGSTLSAAAIRLVACVANVVNSTIH # PASA_UPDATE: g3976.t1, single gene model update, valid-1, status:[pasa:asmbl_2698,status:12], valid-1 NODE_1816_length_9110_cov_41.5016 . gene 7273 8914 . - . ID=g3976;Name=g3976.t1 NODE_1816_length_9110_cov_41.5016 . mRNA 7273 8914 . - . ID=g3976.t1;Parent=g3976;Name=g3976.t1 NODE_1816_length_9110_cov_41.5016 . five_prime_UTR 8807 8914 . - . ID=g3976.t1.utr5p1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . exon 8738 8914 . - . ID=g3976.t1.exon1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . CDS 8738 8806 . - 0 ID=cds.g3976.t1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . exon 8354 8487 . - . ID=g3976.t1.exon2;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . CDS 8354 8487 . - 0 ID=cds.g3976.t1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . exon 7761 7950 . - . ID=g3976.t1.exon3;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . CDS 7761 7950 . - 1 ID=cds.g3976.t1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . exon 7273 7547 . - . ID=g3976.t1.exon4;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . CDS 7446 7547 . - 0 ID=cds.g3976.t1;Parent=g3976.t1 NODE_1816_length_9110_cov_41.5016 . three_prime_UTR 7273 7445 . - . ID=g3976.t1.utr3p1;Parent=g3976.t1 #PROT g3976.t1 g3976 MAEIQRAMALLAFSADTDHPVYKRLFDVNRWYALVDEFRHDSFVLNSLTTEPLLAITLQAGLSSLKTPMCFREDSKNPNCPVCMPALNDLAKELPSSHRVRSSLVCRITGKPINEDNPPMVLPNGYVYSQAALTDMAKLNDGDIICPRSKDRFRLSDARKVFIM* # ORIGINAL: g558.t1 original gene structure, not modified by PASA NODE_1205_length_13078_cov_33.0896 AUGUSTUS gene 1942 2268 . - . ID=g558;Name=g558.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS mRNA 1942 2268 . - . ID=g558.t1;Parent=g558;Name=g558.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS exon 1942 2268 . - . ID=g558.t1.exon1;Parent=g558.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS CDS 1942 2268 . - 0 ID=cds.g558.t1;Parent=g558.t1 #PROT g558.t1 g558 MGVLGTLKRAGGSVLRAFGQRAKTEAADWWKANKGDVTSLTKSVGSMAIDRAKDYTRDKGRSFLAGVMQKLKSHQITLDSLPPALRQQIEKLISPQGMATLGLSLATT* # ORIGINAL: g559.t1 original gene structure, not modified by PASA NODE_1205_length_13078_cov_33.0896 AUGUSTUS gene 2350 2655 . + . ID=g559;Name=g559.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS mRNA 2350 2655 . + . ID=g559.t1;Parent=g559;Name=g559.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS exon 2350 2655 . + . ID=g559.t1.exon1;Parent=g559.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS CDS 2350 2655 . + 0 ID=cds.g559.t1;Parent=g559.t1 #PROT g559.t1 g559 MGLIVESYEDEELGLDVMSVYISIANVFVLKNAASADGSISYEGRGEFLLRRKNGSAIAPAPFKTLTVSKKYTRAEFQSVGSVHADLYNGLKETFPGAEDA* # PASA_UPDATE: g560.t1, single gene model update, valid-1, status:[pasa:asmbl_796,status:12], valid-1 NODE_1205_length_13078_cov_33.0896 . gene 3306 11954 . - . ID=g560;Name=g560.t1 NODE_1205_length_13078_cov_33.0896 . mRNA 3306 11954 . - . ID=g560.t1;Parent=g560;Name=g560.t1 NODE_1205_length_13078_cov_33.0896 . five_prime_UTR 11839 11954 . - . ID=g560.t1.utr5p1;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . exon 10620 11954 . - . ID=g560.t1.exon1;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . CDS 10620 11838 . - 0 ID=cds.g560.t1;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . exon 5062 10469 . - . ID=g560.t1.exon2;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . CDS 5062 10469 . - 2 ID=cds.g560.t1;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . exon 4435 4778 . - . ID=g560.t1.exon3;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . CDS 4435 4778 . - 0 ID=cds.g560.t1;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . exon 3306 4053 . - . ID=g560.t1.exon4;Parent=g560.t1 NODE_1205_length_13078_cov_33.0896 . CDS 3306 4053 . - 1 ID=cds.g560.t1;Parent=g560.t1 #PROT g560.t1 g560 MVGIVPVACCAYDSTQAHPQAPEFMMLPREVKYAYDTSLAPIGPEFHHVDSFDEQWEAADDNPYKNLIDLLRMAGDATTMLNVGGERLRRRAIKLELQPSAACNWSESTINIVSAVTAENGNIRVGTPVTVVDIPEIYRHLPPNRTNVDRTPSPGYRPVDGTHSHPKRNHVCIVVRNSATAFEFDHIQYPCNMSTGTLTVLVSKVNGRVRVIIVRTRTNWRELNRGLMAQARVNPNFEPGINIEENLFPLLDRVPIGGRVLSCECTVLPGELCTHGQALLLRINSFYLDLCMAVMNVFAGSVGLEVYRSVDEERPVLGPHFEYMGDEDEATDPNLWDASKISSVLRVNGVCRTACDRVRACNNLRGATFFAMTAREYADKFDLSGEDSSMVTRIGDALRGSNTEEKEFSFDSLWGELWSNDRPAKTLPGFELPFMVIAAPHTTALSAGDVAQIEKTVNEFVHKAAVADFQVFLAKLLPDDREGSAAADSSNACGEERNLTRFKWRLIHLLRYLRAKIGKPKDNCLATLRESLEWDEVPDDLDIEVEFLENWIKNNHPGASARLLVGGDVKHPWLAMFLFSSSLLDLSKRLAEVTRDEPSLNVTACSISEIYPDIPETYVSPEPVNPDEVDAMMNASEEDDAPIEQPIVPPDLQPREEEPKSKVTDFIFPAQQRLGDILYDRMRCILAAKGHPLSGFKRFVFRILTANFEMLEAQTEARLMQISGLFDEDSHVRDIDGDKWRKPTVDSKVERTVFKGEINQRFANFYAQLIKCPDTLGVLVVDECHWAANKYQAYDYFVNLTTVAHAGGGKVIPALQEWAALRAKLGEYWTKERGGVIESSHQIDNLVILLVSATPFNQLSETSRVPIKHIVGHPPALVHSDTPMPGASVSDALVVDWSECQDNDEPFRLTSITASDPTADTTSDRAASYAHYYLCARATGHGDDEWRLCMEPVPKCTTHANATETVATLSDVGIDLYFEQSDSGEGRLYTKLPALIDERETRKMYVVAVEGRPCLEADVSSASHFRLNRRSGVDFVEIQQCLSPNAVSFLGYHTERADGSAPELIFLCDGNAIPLRGQFVVCPSRPPSVDASGVAQANKKPFYRSVDYYVNSMRYAEPHQRLIRRDRHLLEVVRNGSFKRAANEAIEKFAKGGKKGEGGDGDAFETAANVAVACDYVYSIVRQGVFFKECLSDVKGEPSVRPEHRARGMLDKGTKWWSECGERVAGALDDVETKTGLPLRAYLAQYAENMGTDADNETRDWSVVLHFFVLQQMHPSLVQHISWEKCRDRLLARFLDADSIQAFLLARTETDIVVEDLIIDNAVLDPYNDGTVRMKGSMKIVRMSAIWSAALFFKSVRRAAHLVKLGRVFHLLRDFGEKRLSKAFHADGEEDASQNSADATDANYWLRLLQPRGCGDCTCAELTMSSGAWACESCGHLHRRIQQYEDLNDLPCILILVDKGRMGDTFPGSFDCLDIRTSYNFHVKADLQLSTIVQELGRMCRYAPVDGRLPYALVGDKLFTTLRDALPTHVSIRRMIKRHDGHFGSAVAKLHQHFPWRYMQRTNKKHFDFEKEPRPEPRMHDARIVLQAEPQIGKTGTYLALLDRLRRELPDWPPPGVRLPKITGVCDVRQWAYPYWKTMKEQTGNISNYAPGPRKYDEILGGDRYGSGKGMNEQQLEAAVEYMARHRNGRAPSAPIDYGADEDTNVGYDEVPFTADLFRFELRRWRNAPPGGDAGSTMAWVHVKARVFDFRARISIPISLVDTVEWQIGQKECRLKNSALRGLDVHYWIFQLSHPSAGKSSADARLDLSAALDGKTYAQAVVCRSIDAYDRWRDTHVIIELPERMGDSRVEQGIGYARQFVQLLAETHGLDFVFSIDDNIAHMAELDLPLERQEGTRLFQSQPCSLWTVVERLQSQMEGWTIGDSFELPELADCPDAPKNNKLWRYTGPPKKYALLGTARFPHRAVTRLPFKRTHVFSFALINVKAICTSKNAPLYPPWPFWEDLHFNDACDKDGLWVCKYNRFLQIKEPSRFRPKSRETQFVCVEWDLKRGIVCNDDIPREAELSLQLEALIHFAGTLNPASAKLAVSKRSFDVDPLSMETISSVDVALKNSGVQIADTPSPSCQGSACVFLSNDRGDLVGSFSEYAKPLLAFVPLEGKHNMPVEDNLRRVITSLAGVQTKLYVAHRRDLQHLSPIPAKVVLLFVRKLPVATDTAPEVPKPSPTVPKLPPSPTVPKLPPSPTVPKPPPSPTVPKPPTTASVPKPPTPSPTVPKPPTPSPTVPKPSPTVPEPPTTATVPQPIVTLPGGKKAVYCLGDMNRVHTKETKKDCFYLIPDGFEGETVLTLRLEQSRKQSPESKRRRLNNDGSTEVSADTIGGIPSATAERLDNEETFALRVKTTIKYGNEDNFPRFNIELFPEDRERIPERFIRTRSNPGDPWPRPPPTGGWKTPGGAFREFVKDNFWDAEPDRFSITGYDRFGGLGTKQVQNMMIKEAMELGSVASGTPAAAAPTAATGGEPARETTRTPGRKRAANDASPARPGGKRQKTMTDNSRRQPPDATSDECDGDGERA* # ORIGINAL: g557.t1 original gene structure, not modified by PASA NODE_1205_length_13078_cov_33.0896 AUGUSTUS gene 293 1849 . - . ID=g557;Name=g557.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS mRNA 293 1849 . - . ID=g557.t1;Parent=g557;Name=g557.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS exon 293 1849 . - . ID=g557.t1.exon1;Parent=g557.t1 NODE_1205_length_13078_cov_33.0896 AUGUSTUS CDS 293 1849 . - 0 ID=cds.g557.t1;Parent=g557.t1 #PROT g557.t1 g557 MNPANPLPTVASSEYFMDSAKPVAVLEPSIKRQELVHTAISGTSSGAGSAITFSIPGSQGICLQNLSFTMDVTAVGGTSTASSTVLFKKGLCFLTRCRVILGSTVVWDVTQFDELFNLISQHNTAEYQSSIAAIGWNGSQDEIKAHRLLNVAGVLRMGAATTLGSALSAPLDSSSLLARAQRYVADEEYRVALAGGNAATTKKFRFSLPAAFLPWGRACLPHYASGQSLSIEFTVATDMSSVFQLVQGDNASLATMPTGISIQNSKCYANMIRVSDAAIRNHYAIVRSPNGLSTQYLGVTTETSQGQSFAVDGVKKFVLQTKAQSIQYVLGQIQPILAGNATCANDGYSSYGQAIKSINCRLNGLPAPHTSLEIAHENGAILMELQRMFSPSVNGSIDDHPPNFCWQQYRKPISGTSTAITAATAGPPTTSADQFCELIAAAQHRSGVFAIDLRAVESPFDSFIAKGGFNSASNAAGEIQIEIDHLAFPPGFQSCNVNFFVIYESELQLSAQGVRVYV* # PASA_UPDATE: g9821.t1, single gene model update, valid-1, status:[pasa:asmbl_747,status:3], valid-1 # PASA_UPDATE: g9821.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_748,status:12], valid-1 NODE_119_length_37975_cov_42.5141 . gene 159 3018 . + . ID=g9821;Name=g9821.t1 NODE_119_length_37975_cov_42.5141 . mRNA 159 3018 . + . ID=g9821.t1;Parent=g9821;Name=g9821.t1 NODE_119_length_37975_cov_42.5141 . five_prime_UTR 159 227 . + . ID=g9821.t1.utr5p1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 159 236 . + . ID=g9821.t1.exon1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 228 236 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 352 480 . + . ID=g9821.t1.exon2;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 352 480 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 617 780 . + . ID=g9821.t1.exon3;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 617 780 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 897 1020 . + . ID=g9821.t1.exon4;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 897 1020 . + 1 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 1298 1472 . + . ID=g9821.t1.exon5;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 1298 1472 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 1624 1754 . + . ID=g9821.t1.exon6;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 1624 1754 . + 2 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 1941 2222 . + . ID=g9821.t1.exon7;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 1941 2222 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 2338 2490 . + . ID=g9821.t1.exon8;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 2338 2490 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . exon 2736 3018 . + . ID=g9821.t1.exon9;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . CDS 2736 2786 . + 0 ID=cds.g9821.t1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 2787 3018 . + . ID=g9821.t1.utr3p1;Parent=g9821.t1 NODE_119_length_37975_cov_42.5141 . mRNA 159 3014 . + . ID=g9821.t1.1.5b6be70a;Parent=g9821;Name=g9821.t1 NODE_119_length_37975_cov_42.5141 . five_prime_UTR 159 438 . + . ID=g9821.t1.1.5b6be70a.utr5p1;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 159 480 . + . ID=g9821.t1.1.5b6be70a.exon1;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 439 480 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 617 780 . + . ID=g9821.t1.1.5b6be70a.exon2;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 617 780 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 897 1020 . + . ID=g9821.t1.1.5b6be70a.exon3;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 897 1020 . + 1 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 1298 1472 . + . ID=g9821.t1.1.5b6be70a.exon4;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 1298 1472 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 1624 1754 . + . ID=g9821.t1.1.5b6be70a.exon5;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 1624 1754 . + 2 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 1941 2222 . + . ID=g9821.t1.1.5b6be70a.exon6;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 1941 2222 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 2338 2490 . + . ID=g9821.t1.1.5b6be70a.exon7;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 2338 2490 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . exon 2736 3014 . + . ID=g9821.t1.1.5b6be70a.exon8;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . CDS 2736 2786 . + 0 ID=cds.g9821.t1.1.5b6be70a;Parent=g9821.t1.1.5b6be70a NODE_119_length_37975_cov_42.5141 . three_prime_UTR 2787 3014 . + . ID=g9821.t1.1.5b6be70a.utr3p1;Parent=g9821.t1.1.5b6be70a #PROT g9821.t1 g9821 MTESISVAHALGIVGRRLDIRISDTERRKGNEMIGEGHMVYHVVAKALEPIAGFPSGEVFVWRRFNDFDGLRNYLSANHPTIVIPPMPPKKQNVTWKGTDNFDPEYIEKRRAGLQTFLRRIAAHAELGEDTSFLSFLKDDAWTPMPVTDKYDDKLKSINASLTLKDEDSRFVDVRNYAANLQENIGSLVRVQERLSKHVLDHYQELGNLGKPFSSWSEQEKEMGDTLQSTGHFMDNMALSAQEKVKDEEANFTDNMRDYIAFGDSLKVLVHKHDLCNLDRQKAADALASKTAALEAARSDGEGGASAGGFRGFKSMFSKESPDQRDERIRQLEEGVEQARLADEQAKKDYEKFVTSALEEVAIFNRNKVCDFKAIMLHHAKQQAHFYRKSLSAWENLKQVYEKIP* #PROT g9821.t1.1.5b6be70a g9821 MIGEGHMVYHVVAKALEPIAGFPSGEVFVWRRFNDFDGLRNYLSANHPTIVIPPMPPKKQNVTWKGTDNFDPEYIEKRRAGLQTFLRRIAAHAELGEDTSFLSFLKDDAWTPMPVTDKYDDKLKSINASLTLKDEDSRFVDVRNYAANLQENIGSLVRVQERLSKHVLDHYQELGNLGKPFSSWSEQEKEMGDTLQSTGHFMDNMALSAQEKVKDEEANFTDNMRDYIAFGDSLKVLVHKHDLCNLDRQKAADALASKTAALEAARSDGEGGASAGGFRGFKSMFSKESPDQRDERIRQLEEGVEQARLADEQAKKDYEKFVTSALEEVAIFNRNKVCDFKAIMLHHAKQQAHFYRKSLSAWENLKQVYEKIP* # PASA_UPDATE: g9830.t1, single gene model update, valid-1, status:[pasa:asmbl_753,status:3], valid-1 NODE_119_length_37975_cov_42.5141 . gene 33628 35042 . + . ID=g9830;Name=g9830.t1 NODE_119_length_37975_cov_42.5141 . mRNA 33628 35042 . + . ID=g9830.t1;Parent=g9830;Name=g9830.t1 NODE_119_length_37975_cov_42.5141 . five_prime_UTR 33628 33691 . + . ID=g9830.t1.utr5p1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . exon 33628 33782 . + . ID=g9830.t1.exon1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . CDS 33692 33782 . + 0 ID=cds.g9830.t1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . exon 33944 34066 . + . ID=g9830.t1.exon2;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . CDS 33944 34066 . + 2 ID=cds.g9830.t1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . exon 34179 34249 . + . ID=g9830.t1.exon3;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . CDS 34179 34249 . + 2 ID=cds.g9830.t1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . exon 34479 34644 . + . ID=g9830.t1.exon4;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . CDS 34479 34644 . + 0 ID=cds.g9830.t1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . exon 34751 35042 . + . ID=g9830.t1.exon5;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . CDS 34751 34890 . + 2 ID=cds.g9830.t1;Parent=g9830.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 34891 35042 . + . ID=g9830.t1.utr3p1;Parent=g9830.t1 #PROT g9830.t1 g9830 MDCLIGIAGEGFVLVAADTNAARSIVVMKTDQEKMFQLSKNMVLLSSGESGDSVQFCEYVEKNVKFYEMKNGIPMSPHAAANFIRNAMASSLRSRSHYNVNLLMAGYDPTTKAGELYYLDYLASLNKLAFGAHGYASYFVLSILDRHYKPGMSVAEIKKLMAVCIAEVQKRMVINLPKFSIRLIDATGVHVVDSLE* # ORIGINAL: g9829.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 25218 33315 . - . ID=g9829;Name=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 25218 33315 . - . ID=g9829.t1;Parent=g9829;Name=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 32984 33315 . - . ID=g9829.t1.exon1;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 32984 33315 . - 0 ID=cds.g9829.t1;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 32579 32808 . - . ID=g9829.t1.exon2;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 32579 32808 . - 1 ID=cds.g9829.t1;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 32082 32288 . - . ID=g9829.t1.exon3;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 32082 32288 . - 2 ID=cds.g9829.t1;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 31926 31994 . - . ID=g9829.t1.exon4;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 31926 31994 . - 2 ID=cds.g9829.t1;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 25218 31783 . - . ID=g9829.t1.exon5;Parent=g9829.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 25218 31783 . - 2 ID=cds.g9829.t1;Parent=g9829.t1 #PROT g9829.t1 g9829 MAEDTLSVRLWPWAETAAVEPSERFAAEDAHNTRNDAHNAASILGSRRTHDAVAAAQQAAAAGALASATECKLEPSGSAMALLAGDGRVTVWSTLVGAGGSCAVLPGLIRLLEWLPDGKPARTEDSSDAFAYAGLQGARDVSVAILVTAVERGGLAIHRVEASPSGGVSATSRSFQHLPSFPVSSRQAVNVTDIAHLTTDGGELVIVDASGGVTCCELRFGWDGVVAVSSFSFPLVPLDVKLRAGAVFSLEMDGSIGIHDKRTGMALALIPATDTIYGTGCVPVAFDVDVRGELVALLCENAVAIVRVPVRNASPSASMCDIHVPEASVGSPFVAVLDAPWQKEAAVLSRRRNDRPRNTHRDQRQHVRMLQLPRPSTATSVDVVGAFVCVRLRDETPHGKLMVWNASSDNVCAVVECAMGEPWLAVSCAGVLAPLYLTVGGIHTMVADLSQGGAIDAVVAFCGTPAAESLCAINGWDRRTLQMHSLATGLRFRRANAVLGALRGLDADQHDAALRLLTAAAADEGGGGRGGSEFGDQLAGIAMSFASESLGRASRAVIAHPDANGPRARLAALGRHVVTLRRVLAGQLGQDGAGAAEEGAVAAQRQGGSGVAAALANVGAPGLLEPLSKRLSRIAAAGLDTARGDDAVAGAPGDDGGRVAHVGHSWLVTDSLATAHVRWAGLSAAEVARSAALEGSVSLGQAYIRARALGAGERAQFTMAAVMREVGAMVHRLLRGRQMDAAIAVLRNAGVDHGDVLRAVGMATISRGVRMHVAGSPALRSRLSPDDVASLAFMQRVEGLHPQCTLGAAVAAAGPRSSRFEPPVSASPGGRLGRGILADMYIPSPADVATAEPDMPDEGTDGRPPVDGDRGRGYFEATAGWIAAWSDEIRQRIVLENSIGNEKGDIGAYADDGDGSVGPGPLWKYHASRGNVRALCEIVRRPGIAALIASSLSDGCPHPPRGVPMYAWRQLEAALCLRGNFSMVVMDLKSGDNVQCWHRRLATLALCAGENLSRIGPVFFELAQKTESLNLPLSLQVCWRLRPSEGTAERAIGGLFAEWRVAKSAGVPSWLLLLGAFHAAGRGSHPVAISLAGACLANAVHVVPSIGAALLRLDLEDAEHGREGCAPELAAALSERPLVAVALAAARCWEAAGGAGGDARCQPLPAAVLRSYPFLAAAAAEVRPTDTNGDGGHGGDGEGGMRDSFALRLHGVIFPNTHGLGVTSDRRLRTASSGAGGSPLLFPGDLVAMGRPCHALGMHLSRPGARGAFDRMDLDGALRCMCVLAWESLRVPASCAAFVELAGWDGSALRLDCSAARRIGRVAGSSGDHVDAGGFFARAVADRVCGGAEGSLDGACDALDGATLQLVASQRLHPTSWDAARLWRLPHLFLRAHRGAPASSNFMDSCGAGEEWLVLLAYAQSLRVPVECVLAAATHIPGDDLREHIRVFAEGLSTRTSAAPVVDPRRALMVGDRSRGLRATFYSKVGLGSPRRPSVSALASGGAEASGGAEAVVTVGAGLTGQALFVRPAAHEIAAVLDGPSGLFGVVATGIKSANAVQTLLRQALLRTRPLLAVVAGSIDGASALESACVWLLAACPALAECVGDMSASAVGGASLALLETLAASLVRLGTLRPLEDVFALFDPSHPLVDFVRFGERFVRRDFAAAKGHLSLFVAMMVASQVRPMASALPRRISGPEWACSAARSLAVVLLERCPTRHERSVLVDMFCACKFDPAYEQLRAILPALEDAGLAPRLGLAGIGGPESGEGDGLSYEDIAVRRTTRCVELFRNSRLWSTERSRIAFWEWCGTALSGKVRPRWAVEFFLGEADRDCGGGDSVQSPQERLVLLRLAAAWARRAEGSDSGALELRVWLATCAAVCSTGPTVHPSEWVELPSGAAARAPPPLNADDRDALRRVIHGLLRDGRRAHAEAVARCFGCHDMAEIAISRAAALVASAEAPVNFADDSAVASILREVGIACDVVLDPRTVLAALRALERLSPPGCASYCSRVASNFESASALGVRYADIEQMSATECLGCMIARTDGISLARTYIAANNVSTTTIADVLSDAYLRALRLSRLRREDADFHTESGQSSEAVSTRWSQPEFLRYVSLCPDVSLVGRLLLDSTGDDSAPWDAPAEANLIIRAHQCFSFACSEDGMAAVLARVRSTVDTFALQGEHRALARIAMEIRRFRETECIFDALLGHDQFELVLRKAMDKKGLPEFRAALHDYLRRRHPRDTVRLTMVCVHFNMLREIGDILVEEASQRLCAVKKHTTSTPFPGSELLAVLRLYSDAADNYIRDDATRRALRCMSLARLVCLQLQLHDTAWIVNLTNHDAIAMMAQLGRFLDALILAEAYGVQNSDWAGPIYHQAVVCGNVKYLEDYLAACPALDSLFVDLTSRFKSSPQRSQQTLAMQRIVSLVPDVRLRYRLAKDLAFDDVLSSLLASQSGLVLKDVEGVTKEWCP* # ORIGINAL: g9823.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 12015 13299 . - . ID=g9823;Name=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 12015 13299 . - . ID=g9823.t1;Parent=g9823;Name=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 13249 13299 . - . ID=g9823.t1.exon1;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 13249 13299 . - 0 ID=cds.g9823.t1;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 12670 12741 . - . ID=g9823.t1.exon2;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 12670 12741 . - 0 ID=cds.g9823.t1;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 12462 12536 . - . ID=g9823.t1.exon3;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 12462 12536 . - 0 ID=cds.g9823.t1;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 12015 12281 . - . ID=g9823.t1.exon4;Parent=g9823.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 12015 12281 . - 0 ID=cds.g9823.t1;Parent=g9823.t1 #PROT g9823.t1 g9823 MSKTSTRRLQLELRELQANPDPFFKLASVPDSLQCWTLHMLGAPGTLYEGEKFTLRFVFNDNYPFEAPEVTFVPDAVPVHPHVYSNGHVCISVLSDGAEGAWSPALTVSSVCQSILSMLSSCKLKERPPDNDRYVSHCARSPKKTKWAFHDDTV* # PASA_UPDATE: g9824.t1, single gene model update, valid-1, status:[pasa:asmbl_751,status:12], valid-1 NODE_119_length_37975_cov_42.5141 . gene 13719 19212 . + . ID=g9824;Name=g9824.t1 NODE_119_length_37975_cov_42.5141 . mRNA 13719 19212 . + . ID=g9824.t1;Parent=g9824;Name=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 13719 13940 . + . ID=g9824.t1.exon1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 13719 13940 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 14061 14252 . + . ID=g9824.t1.exon2;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 14061 14252 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 14438 14532 . + . ID=g9824.t1.exon3;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 14438 14532 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 14641 15136 . + . ID=g9824.t1.exon4;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 14641 15136 . + 1 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 15399 16547 . + . ID=g9824.t1.exon5;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 15399 16547 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 16926 17027 . + . ID=g9824.t1.exon6;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 16926 17027 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 17134 17643 . + . ID=g9824.t1.exon7;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 17134 17643 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 17884 18135 . + . ID=g9824.t1.exon8;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 17884 18135 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 18270 18414 . + . ID=g9824.t1.exon9;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 18270 18414 . + 0 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 18637 18790 . + . ID=g9824.t1.exon10;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 18637 18790 . + 2 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . exon 18962 19212 . + . ID=g9824.t1.exon11;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . CDS 18962 19100 . + 1 ID=cds.g9824.t1;Parent=g9824.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 19101 19212 . + . ID=g9824.t1.utr3p1;Parent=g9824.t1 #PROT g9824.t1 g9824 MDFLAENNACGQTILRLVSRGNAIIAELLRLGDFVPPVFRLETKDDRDKYGDILIDFNYFRNSEFYDNKIESSADLVDIDEEFKDNHLEIVTRFYLAFESVYKYVVDLTHFLEDLDEGVFIQQTLETVLQNTDGKQLLVESLYLYGVMLLVLDSKMEGPVRERMLVAYNRYRGAQANEANIDEVCKLLRGTGFVPGGKRPQGYPEQYFKRVPLPEQFVDMIIGRLRSDDIYNQISAYPMPEHRSTALATQASMLYVILYFAPDMLNNQQSKMREIVDKHFPDNWIVSVYMGTTVNLMEVWEPYKAASKALNNTVEQSNVKSLAEKYIGKVQTLSKALEKYLTEGVLVEDHVLDNVPKLMNCMRECNVTIRWLMLHTNERSVEAHPRSKKIRDAIAALGYNPRALFGLMLNTGQYEFQLKRLFSDLLAQKQTRWETCKREGVERMTELGDVFSGTKPLTRVEKNENLQAWFHEMARQIGSLDYADSTSAGRKVVQLMQAMEEVQEFHQLETSLQIKQFLAETRSYLHQMIRTINIKEEWLVTMQIVGDLSYAWQTVDDFTPYMQDSIKSDPSIVIKLRATFLKMATALDLPLVRINQANSPDLHSVSQYYSGELVTYVRKVLQIVPESMFEILNEIVTIQTEGMQEVPTRLDKDKMRDYAQLNERYQVARLTHKISVFTEGILAMKKTLVGIIQVDPKQLLEDGIRKELVRRVADALDKTLVFNNAKGNEVVKRLELLSARMDGFRRSFEYIQDYVNIYGLKIWQEEVSRIVMYNVEQECNSFLKTKVFDWQSVYQSAAIPIPKFPPVDRESVNFIGRLAREILRLTDSRTTVYIDAMSAWYDAKTTRELVNIKMFGSLHRAVGSFGLAGLDRLLCFMVVREMQAYTAAYKRLIKADKSLRQMIDECAQVLDPATETPANPAKVYPVAATKGARLWSLYLDAVMRVGQIQLVRRLIANELRASARADSKLLASCLTVMNDSLMASIHAHYKNPALPYPSDDNPLLYELSLYLESAGLGDTFSKIYVPTQQLEHLSLVNALFATSQLPRLQYTKGVGAMLSKNKSDPLDGAPFVVGMLTFVRQFHAAHQTEFLAYMGQYIRAHVVGTRDAKSMDLPAEVVNGLVFLEDYCRYGSISRKAVESCIPNYLFDHFK* # ORIGINAL: g9832.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 37566 37975 . + . ID=g9832;Name=g9832.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 37566 37975 . + . ID=g9832.t1;Parent=g9832;Name=g9832.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 37566 37745 . + . ID=g9832.t1.exon1;Parent=g9832.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 37566 37745 . + 0 ID=cds.g9832.t1;Parent=g9832.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 37842 37975 . + . ID=g9832.t1.exon2;Parent=g9832.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 37842 37975 . + 0 ID=cds.g9832.t1;Parent=g9832.t1 #PROT g9832.t1 g9832 MEFINERRRSSFRLWRDGDAGEDSAVATPDKDIAQPRLSPRIGRTQQQENVPSPSSVKISALEQELAKLREQIAVIVTMQMSMPVPSGGPPAPPIAAGAPPPPP # ORIGINAL: g9826.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 21379 22040 . + . ID=g9826;Name=g9826.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 21379 22040 . + . ID=g9826.t1;Parent=g9826;Name=g9826.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 21379 21752 . + . ID=g9826.t1.exon1;Parent=g9826.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 21379 21752 . + 0 ID=cds.g9826.t1;Parent=g9826.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 21920 22040 . + . ID=g9826.t1.exon2;Parent=g9826.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 21920 22040 . + 1 ID=cds.g9826.t1;Parent=g9826.t1 #PROT g9826.t1 g9826 MDAMDGSVRGTASQDLVAEKIREYERFLGDRLQTDLRLALAARDRVYARSAEYLRLRSAIEAMQASGAMPSGVSAMVDLGCNFYAQARVEDASHIYVEVGFGFYVQFTAEEALAFIDKKTAQLNGSANDLSAQAAKIRAHIKLVLEALQELQFGGARRPQQRIL* # PASA_UPDATE: g9822.t1, single gene model update, valid-1, status:[pasa:asmbl_749,status:12],[pasa:asmbl_750,status:12],[pasa:asmbl_754,status:12],[pasa:asmbl_755,status:12], valid-1 NODE_119_length_37975_cov_42.5141 . gene 3376 11863 . + . ID=g9822;Name=g9822.t1 NODE_119_length_37975_cov_42.5141 . mRNA 3376 11863 . + . ID=g9822.t1;Parent=g9822;Name=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 3376 3554 . + . ID=g9822.t1.exon1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 3376 3554 . + 0 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 3660 3924 . + . ID=g9822.t1.exon2;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 3660 3924 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 4202 4401 . + . ID=g9822.t1.exon3;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 4202 4401 . + 0 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 4514 4793 . + . ID=g9822.t1.exon4;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 4514 4793 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 4937 5872 . + . ID=g9822.t1.exon5;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 4937 5872 . + 0 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 5988 9441 . + . ID=g9822.t1.exon6;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 5988 9441 . + 0 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 9587 9773 . + . ID=g9822.t1.exon7;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 9587 9773 . + 2 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 9950 10030 . + . ID=g9822.t1.exon8;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 9950 10030 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 10182 10354 . + . ID=g9822.t1.exon9;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 10182 10354 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 10640 10752 . + . ID=g9822.t1.exon10;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 10640 10752 . + 2 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 10927 11000 . + . ID=g9822.t1.exon11;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 10927 11000 . + 0 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 11182 11325 . + . ID=g9822.t1.exon12;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 11182 11325 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . exon 11434 11863 . + . ID=g9822.t1.exon13;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . CDS 11434 11569 . + 1 ID=cds.g9822.t1;Parent=g9822.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 11570 11863 . + . ID=g9822.t1.utr3p1;Parent=g9822.t1 #PROT g9822.t1 g9822 MATIVPHRRRMGWAPLLLLASLFIIGSAVASVSADVECTVTDNRAMLTYDLSPLKKLTDSWRLVAPDADGKEFKYFVNVCASAAECGDGVGACRVTADGSIASLGPPAEPQLSGGALSMHFTSAIACAADPSLTHVLKIDFVCLPGKNGHRADVKSYISWDPLLATFWLTFLPLQLPSIRSDQRIVDEKGTCSAYDDSVDPPRFYDLSSLSLYNGNWEAVNSEPSKYTFLLNMCRGLNPVGDAARCPTAAGACQVAPGEASRGTGLATAQLNVFGDLIVVVYSGGEACGNGNNRTSVVVMECDRSVGVGAPLFVSEEDCTYQFLWRSAAACPVERIVGEQCAVEDEDTGMIMDLSPLKGKAFTVTDDGYEYNVAVCGALPPGVCKDPSAAACQKKTTDASFEKVMGLANEAPISDDGVVYLHYGNGTTCGSGIARSTGISFTCDPSAGNGSPRFAGENNCTYNFEWPTALVCVSEIECVATDAQTGNQYDLSALASQRSSWVAVDATVAKSDMSFHISVCTPVPSAGAAFCPAQTGVCGSVASASGYVGYDLGHPSAPIVRDGSVILRYSNGTACRTENSRASQSQVTLRCVPGTIGVPKFVDVDECTYYFEWETSAACPFVDVDECTYYFEWETSAACPVGGPVTGDGCRVENPETGEAYDLSALKRVSGSADGDYTIVADGYTYEFNVCGALVDKSACGGNGNAGGCQTKEGAADRVLGVFTDDLELRDGELYLVYTGGEACHKGTDNEVDRSVSIHFVCDTTVNGNGSPVFVGESKDICQYNLEWRTKSACATSAEIECDAIDLVTKDEYDLSALSKGSGGWDVVDATGQGNKFKVNVCRSLGKIAGTTCAWGAGVCGNLTDGFWNVDFGKPGTPIAKDGVISLVYENGGKCPGDDSDVVRSVFSLTCKPGTIGVPKFVGVDECTYNFEWETSAACPVGGPVTGDGCSVTDLVTGETYDLSKLRRRPGVDEQDYTVAAGVYTYEFNVCGGLIDGTSCGSNAGAGACQHAEGKSDHVVGLWNDDPELRDGELYLVYTDGDSCHKGTEGEVNRSLAIHFVCDSAAGIGEPILVTENKEVCQYLFEWRTASACARGASVECAVEDDLTGHQYDLSRLSNATGGWNVIDATGHNSHIRINLCRPLGRKAMGTCPPSSGVCGDLVGISSLNLGNPAELSARDGVVVARYENGSVCPTDPYDTIETVLTLTCRPGSLGAPKFLGLSDCLARFVWETEAACAVAGPTVGANCLVADPESGALYDLGGLQQVRGGAYTVSGDGFTYSLNICGSIAKDGMCGAYKGAGGCQTDTRTGVQRLLGVFNEAPVLMDGEPYLIYRGGEPCHKGTEKETNRTMTIHFVCDPTAKADSMPIFIGEAKDVCQYDFVWRTRLGCAVDTDFECFVADYAKGLQYDLSDLTRDEDETNWKGFNPSDPSAKFILNVCRSINAADAGGCPTGSGLCVQKDGKSFSLGRPTPPTLDADGSLSMVFDSPDSCPFGDYDVYASIKFGCLANDVGRPVIVASDNPCSFEFLWMTSGACPVHAPVVGADCAVRDPKTGVLLDLSPLRSAASDTEIVVGGFVYHINVCGPLTDGDGCAALYTQRNASTTGACQTVPGHPELSKSMGVFTSSPVIEDDVLVLEYEDGTPCHNSHYNRSLRIEFTCDHTSEGRPVFVRETPECQYVFSWASSVACVARQYESECIYEDDSGDLFDFSPLSRLVDPWVVQDPKSSLTYAINVCRPTEVAGCPSTAGACITTSNANKDLGAASSDFTRKGDVIQLAYTGGAPCDHQRGQITTTIDFVCKKGELGAPVFIDQADECSFQFRWETAAACPYTTREVTGADCKVKDPVSKNTFDLSSLHTSGVAGSVKGPDGASYAINICGDVHVAGSAVSSGIGVVKVPAGSSSALPIGATSSSPVVSDNRLMFTMPAQGTQPCFSGGPASSSMVYFECDQSAGVQGSLSLQYVSSRCHHVFFWKTSAACSGGSIAPTFTPAPSSGGDGGVRLGAIIGTVFGVLALLVMVYLLRSPSRRARAAAVACLPCRFIRARCFSPSRHSADLESLLDGDDDDDELLAL* # PASA_UPDATE: g9831.t1, single gene model update, valid-1, status:[pasa:asmbl_746,status:12], valid-1 NODE_119_length_37975_cov_42.5141 . gene 35262 36758 . - . ID=g9831;Name=g9831.t1 NODE_119_length_37975_cov_42.5141 . mRNA 35262 36758 . - . ID=g9831.t1;Parent=g9831;Name=g9831.t1 NODE_119_length_37975_cov_42.5141 . five_prime_UTR 36679 36758 . - . ID=g9831.t1.utr5p1;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . exon 36311 36758 . - . ID=g9831.t1.exon1;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . CDS 36311 36678 . - 0 ID=cds.g9831.t1;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . exon 35877 36174 . - . ID=g9831.t1.exon2;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . CDS 35877 36174 . - 1 ID=cds.g9831.t1;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . exon 35262 35718 . - . ID=g9831.t1.exon3;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . CDS 35458 35718 . - 0 ID=cds.g9831.t1;Parent=g9831.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 35262 35457 . - . ID=g9831.t1.utr3p1;Parent=g9831.t1 #PROT g9831.t1 g9831 MDVRGVVRQLRDLASNPDFRVAIVHDQGCLPGLVLFLDNEDVEVIATALDALRLLSECHANRATMHGELGMLVSLRGVLDRPDSADGRLHSLARQVLENITPACAPARTSARTAADGEQFHKTLTRRHPQHTTETGTPTGSAAAFFTGHANRRAHTVALSIDALVDVFARQAVESALLRVKGVVSFTFEMPRSRVVIRARSDITGEVIGAAITKATQMHCQLVTKNDRGEDVFSELSAGVATPQSAGRDKENAPPAGLNGEPDYLPEDDCAPPREASKGAVARTGDKGGAGGGWFSSVGGYLARTLYW* # PASA_UPDATE: g9828.t1, single gene model update, valid-1, status:[pasa:asmbl_752,status:3], valid-1 NODE_119_length_37975_cov_42.5141 . gene 23893 24838 . + . ID=g9828;Name=g9828.t1 NODE_119_length_37975_cov_42.5141 . mRNA 23893 24838 . + . ID=g9828.t1;Parent=g9828;Name=g9828.t1 NODE_119_length_37975_cov_42.5141 . five_prime_UTR 23893 23918 . + . ID=g9828.t1.utr5p1;Parent=g9828.t1 NODE_119_length_37975_cov_42.5141 . exon 23893 23963 . + . ID=g9828.t1.exon1;Parent=g9828.t1 NODE_119_length_37975_cov_42.5141 . CDS 23919 23963 . + 0 ID=cds.g9828.t1;Parent=g9828.t1 NODE_119_length_37975_cov_42.5141 . exon 24063 24838 . + . ID=g9828.t1.exon2;Parent=g9828.t1 NODE_119_length_37975_cov_42.5141 . CDS 24063 24734 . + 0 ID=cds.g9828.t1;Parent=g9828.t1 NODE_119_length_37975_cov_42.5141 . three_prime_UTR 24735 24838 . + . ID=g9828.t1.utr3p1;Parent=g9828.t1 #PROT g9828.t1 g9828 MGRSTFLRSLGLLSKARVPASVAPRLTNMSARGLATNSNVPLPRFVSDINDAPSIRLPGVKNVFRDPLAALSGNILTSSSQIALLESSSSEDIKFVARLGDLAKEFSWRSETDEPLMSCLFHWIKDSPFEPQAFLDSIGAEPRLLEDDECSGTTQMYSRSLDDVEDIEDLFARKIDSEEADAEKIRSTTSTLISQLSSLRTLHYIHFGSEKFNPVLIFIVGVTTTGNIGGIVTGAVET* # ORIGINAL: g9827.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 22163 23372 . - . ID=g9827;Name=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 22163 23372 . - . ID=g9827.t1;Parent=g9827;Name=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 23219 23372 . - . ID=g9827.t1.exon1;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 23219 23372 . - 0 ID=cds.g9827.t1;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 22896 22989 . - . ID=g9827.t1.exon2;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 22896 22989 . - 2 ID=cds.g9827.t1;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 22636 22749 . - . ID=g9827.t1.exon3;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 22636 22749 . - 1 ID=cds.g9827.t1;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 22409 22490 . - . ID=g9827.t1.exon4;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 22409 22490 . - 1 ID=cds.g9827.t1;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 22163 22327 . - . ID=g9827.t1.exon5;Parent=g9827.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 22163 22327 . - 0 ID=cds.g9827.t1;Parent=g9827.t1 #PROT g9827.t1 g9827 MHINGSSRSKSPGGRSNGGRESAADGKREVYHGSRDPVGAPPCIKYFLWASPLEELSRPSILSTAPELDRERRQKDVIIGALSKRMRDREDMHRGEVDGRRNMGMVKLEARREQSRLNENSVGYNLITGGYADNSQGSELRRHDYGVMERMSRRGMQLYAKSNTYNPIRGTTPEPLCAFKPLLQSGAAASVRGGAAVSSPPE* # ORIGINAL: g9825.t1 original gene structure, not modified by PASA NODE_119_length_37975_cov_42.5141 AUGUSTUS gene 19262 21080 . - . ID=g9825;Name=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS mRNA 19262 21080 . - . ID=g9825.t1;Parent=g9825;Name=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 20892 21080 . - . ID=g9825.t1.exon1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 20892 21080 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 20452 20568 . - . ID=g9825.t1.exon2;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 20452 20568 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 20252 20338 . - . ID=g9825.t1.exon3;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 20252 20338 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 20042 20137 . - . ID=g9825.t1.exon4;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 20042 20137 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 19788 19943 . - . ID=g9825.t1.exon5;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 19788 19943 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS exon 19262 19303 . - . ID=g9825.t1.exon6;Parent=g9825.t1 NODE_119_length_37975_cov_42.5141 AUGUSTUS CDS 19262 19303 . - 0 ID=cds.g9825.t1;Parent=g9825.t1 #PROT g9825.t1 g9825 MAASTPAVEVFVSAGAEEAAWKDLFAVLTSYGGLRSTSISVISVDPSGKQHPAGLKKASPGGETPAVLSAEGSLVGLHATALFVASQSQKQLTGRNEADYALVSQWLSFAKIDVEGAVRSNDAKRVTGVLQTVNGALADHVYLLGNDATLADIAVYCALRATVAGLSPLRHGEFVHLLRWFDHVQHTVDAFRQGPPRVVVQRSNFYAGHPLFAVGHTDDQPSTSARKA* # ORIGINAL: g384.t1 original gene structure, not modified by PASA NODE_3492_length_3343_cov_38.075 AUGUSTUS gene 159 1881 . - . ID=g384;Name=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS mRNA 159 1881 . - . ID=g384.t1;Parent=g384;Name=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS exon 1709 1881 . - . ID=g384.t1.exon1;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS CDS 1709 1881 . - 0 ID=cds.g384.t1;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS exon 1412 1515 . - . ID=g384.t1.exon2;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS CDS 1412 1515 . - 1 ID=cds.g384.t1;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS exon 658 1048 . - . ID=g384.t1.exon3;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS CDS 658 1048 . - 2 ID=cds.g384.t1;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS exon 159 388 . - . ID=g384.t1.exon4;Parent=g384.t1 NODE_3492_length_3343_cov_38.075 AUGUSTUS CDS 159 388 . - 1 ID=cds.g384.t1;Parent=g384.t1 #PROT g384.t1 g384 MDGPTKRPSHQPQQQQQQHSDTAHSGNRRHVVRYATTIQSLVVDAVADKADQSSLAASLLSGRVVITGLPQAVHSASPSVPDNPTSAVVVHEGRLRRVRAWLNAAHADNSTVSTSMPSDMSGHGPSGIIVRGWYHAETLCDYAASQTHKSVAYCESADGGKTFGRPGYPNNTVLVGAPFAANMTTGAGDHSVVVVGEHYYMYYGFYPQWKTGVARSKVADGGRPGTWTKLSNGSFSVDALSSSPAPDPLNYIAGTFVTWLPNATALVSLGIGPSGVIVASSLDGLTWTAESRIVLLPCA # PASA_UPDATE: g385.t1, single gene model update, valid-1, status:[pasa:asmbl_6130,status:12], valid-1 NODE_3492_length_3343_cov_38.075 . gene 2373 3201 . + . ID=g385;Name=g385.t1 NODE_3492_length_3343_cov_38.075 . mRNA 2373 3201 . + . ID=g385.t1;Parent=g385;Name=g385.t1 NODE_3492_length_3343_cov_38.075 . five_prime_UTR 2373 2421 . + . ID=g385.t1.utr5p1;Parent=g385.t1 NODE_3492_length_3343_cov_38.075 . exon 2373 2722 . + . ID=g385.t1.exon1;Parent=g385.t1 NODE_3492_length_3343_cov_38.075 . CDS 2422 2722 . + 0 ID=cds.g385.t1;Parent=g385.t1 NODE_3492_length_3343_cov_38.075 . exon 3116 3201 . + . ID=g385.t1.exon2;Parent=g385.t1 NODE_3492_length_3343_cov_38.075 . CDS 3116 3201 . + 2 ID=cds.g385.t1;Parent=g385.t1 #PROT g385.t1 g385 MAGTSTGAFRGDIGAHNESDDNTRHVTPTEHTPLVGRTHVQYIEHGGHHLGEHGGSHRGAVADDDGADGLSVSSWNAAGHPHIAPGHAPPRLMRRDSNMNVRALTDGSHDLTLHVGHKLVHVVEEVSP* # PASA_UPDATE: g1363.t1, single gene model update, valid-1, status:[pasa:asmbl_4733,status:12], valid-1 NODE_2657_length_5533_cov_88.3129 . gene 2745 3953 . - . ID=g1363;Name=g1363.t1 NODE_2657_length_5533_cov_88.3129 . mRNA 2745 3953 . - . ID=g1363.t1;Parent=g1363;Name=g1363.t1 NODE_2657_length_5533_cov_88.3129 . exon 3426 3953 . - . ID=g1363.t1.exon1;Parent=g1363.t1 NODE_2657_length_5533_cov_88.3129 . CDS 3426 3953 . - 0 ID=cds.g1363.t1;Parent=g1363.t1 NODE_2657_length_5533_cov_88.3129 . exon 2745 3294 . - . ID=g1363.t1.exon2;Parent=g1363.t1 NODE_2657_length_5533_cov_88.3129 . CDS 2890 3294 . - 0 ID=cds.g1363.t1;Parent=g1363.t1 NODE_2657_length_5533_cov_88.3129 . three_prime_UTR 2745 2889 . - . ID=g1363.t1.utr3p1;Parent=g1363.t1 #PROT g1363.t1 g1363 MDNVIVDFVDLTHGSSTEDSITDAESASSEEMTSGEMTADDADEVMASSSHHDDDSSRSSSALSAFGSHSAPVLPDEEMATFEAHLHRTENLENISASLLSTVPLPLSVASIDPGSSNVAVCSGTVDVDGKITVVDLFSASVCENDEDDENEGGPSEPIRPAAQSYCPMRYCKGVQPVFQRMRDGLLAAPNADALGMNGYVVIERQMCASAKNIAVEAMAHVEFYPSNASVLPRKVQRAYKLPFGRSQKKTAAVRIVDCALRDGFIAVGNCTFFFECDARIHEYFRAQRKRDDLADAVLILFYFLAHGAN* # ORIGINAL: g3595.t1 original gene structure, not modified by PASA NODE_4215_length_2014_cov_32.5085 AUGUSTUS gene 254 1596 . - . ID=g3595;Name=g3595.t1 NODE_4215_length_2014_cov_32.5085 AUGUSTUS mRNA 254 1596 . - . ID=g3595.t1;Parent=g3595;Name=g3595.t1 NODE_4215_length_2014_cov_32.5085 AUGUSTUS exon 879 1596 . - . ID=g3595.t1.exon1;Parent=g3595.t1 NODE_4215_length_2014_cov_32.5085 AUGUSTUS CDS 879 1596 . - 0 ID=cds.g3595.t1;Parent=g3595.t1 NODE_4215_length_2014_cov_32.5085 AUGUSTUS exon 254 420 . - . ID=g3595.t1.exon2;Parent=g3595.t1 NODE_4215_length_2014_cov_32.5085 AUGUSTUS CDS 254 420 . - 2 ID=cds.g3595.t1;Parent=g3595.t1 #PROT g3595.t1 g3595 MHRSYYCMGENGTVNPSPPSGSNPALVYCPVTCPANYYCPTAGQLLRCPSGHYCPLGTVVPRKCSPLSLPCTSGQSSQKLWTAAFFTIMVPVLLYAGLQFLRWRQNRNWAKERVVFHLELEERKDSIMFRAQLEAAVQARGTSVVQMQLDDGRDKSVMTNAGREDRSVDDLAKAAAPDAKSAPPAAAGPGPSAAGHSSESSMSIDFEDLGLTLPTGLTILQGVTGYIRAGTVTAIMGPSGAGKTTFLSVLSGKATKTSGTIKINGKDDLIENWRRVVGFVPQEDVMFRTLTGGS* # ORIGINAL: g10843.t1 original gene structure, not modified by PASA NODE_3725_length_2885_cov_34.4028 AUGUSTUS gene 109 2364 . - . ID=g10843;Name=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS mRNA 109 2364 . - . ID=g10843.t1;Parent=g10843;Name=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS exon 1848 2364 . - . ID=g10843.t1.exon1;Parent=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS CDS 1848 2364 . - 0 ID=cds.g10843.t1;Parent=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS exon 558 1384 . - . ID=g10843.t1.exon2;Parent=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS CDS 558 1384 . - 2 ID=cds.g10843.t1;Parent=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS exon 109 255 . - . ID=g10843.t1.exon3;Parent=g10843.t1 NODE_3725_length_2885_cov_34.4028 AUGUSTUS CDS 109 255 . - 0 ID=cds.g10843.t1;Parent=g10843.t1 #PROT g10843.t1 g10843 MTKSQPYALQFALPAECPRPTSFAAAMTTTAESYIFAENCDSVADSNVSSGGATPLFAQQWVGRLHLRNGKSAWYSLLMYGAFRLTPHDPTDDQPPGYNPDTLTGATMLYNSTLNAQGLNMALVRWPSGSLARAVFKMGATSIAIAVGYPGVCAYPKLDTREVGQSVAIMIEAFDCSAERVIVRTAEDLKNADRCSSLKEIIFDGYAATSIPMTLAATTIDSLKITNSSLVDMSAFASVKTINLDLVYDGVATSRSFLPPRFDQMTALRTINGVFDVSIERDQGVPADAKFTVVAPPSLSTIVQLSLSGVGIDAMSGFDSVTRLGPRFFTSLVQTIDGSDSSNVNESATGATGSTGGRQVKRASALPSVSLYIKNTRLVRLAPMPLLASFGNADVVISGNALLRSLPSLPSLPPLQQSIDFLRVADNPSLCLPTNHAMASDTANRVGVTRPEDSVECVLVTGLESGSASLGSAPSPGAVIGVIGNVLTVLENSTWSK # ORIGINAL: g1985.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 10259 11168 . - . ID=g1985;Name=g1985.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 10259 11168 . - . ID=g1985.t1;Parent=g1985;Name=g1985.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 11073 11168 . - . ID=g1985.t1.exon1;Parent=g1985.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 11073 11168 . - 0 ID=cds.g1985.t1;Parent=g1985.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 10259 10645 . - . ID=g1985.t1.exon2;Parent=g1985.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 10259 10645 . - 0 ID=cds.g1985.t1;Parent=g1985.t1 #PROT g1985.t1 g1985 MPEVERSGPNHFEMDVLPSAMSVHAAKSSGSDNGDTRIAGSLYAAGLWVARAVSPGPAANATAVQAASGDGTAVAPPLPAGFERVPSAAQADWRRPFGIPKTMNAEQLCQVLRSVPVIVRTVAGRTEYEMDLATLRMLTKGALVVYGLMAVMTECSFQNF* # ORIGINAL: g1984.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 9248 10204 . + . ID=g1984;Name=g1984.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 9248 10204 . + . ID=g1984.t1;Parent=g1984;Name=g1984.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 9248 10204 . + . ID=g1984.t1.exon1;Parent=g1984.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 9248 10204 . + 0 ID=cds.g1984.t1;Parent=g1984.t1 #PROT g1984.t1 g1984 MDGSPFNKLPAEVLVCHIAPYLGHADRADLAHTCSRLLAVLRDVRLYRLKDRYYRAVVSATLPRRRLMLGVYGEHSIVVDVDAVVDAFVNGYTVHLRYPDDEPDYERDVSVLGGVHTLILMGWTGVTDVSALGGVYELDLSITDVTDVSMLGRVHTLHLSGCTGVTDVSALDNVHTLDLYRCIRVADVSALGRVHLLVLAGCTGVTDVSALGGVHTLTLARCRGVTDVRALGRVHNLDLTGCTGVRDVDALSNVHTLHLLHMRRGISVSALQNVRILRLSDGPYVDRQLNFYMYARSDYVGVDTLQKTSDVKIWWARG* # ORIGINAL: g1987.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 13257 14237 . + . ID=g1987;Name=g1987.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 13257 14237 . + . ID=g1987.t1;Parent=g1987;Name=g1987.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 13257 14237 . + . ID=g1987.t1.exon1;Parent=g1987.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 13257 14237 . + 0 ID=cds.g1987.t1;Parent=g1987.t1 #PROT g1987.t1 g1987 MMLKRACLRPALSAVLDCLLDTDELNWLREIEVCADRIRDCEGGDPFSLALKGSAVVFNGDLAAGADVIFPVKRIADGACGMFCLQSKATKRAVKLSNALATVHSGTQYLCTSHDSLKAGEAIFVEPKKVKAALGGKRDAYVATLSEFSVDESLWLRALFSAQPCLPDLVKRVNKHNASYANKPSDAILLISPKAAMFEGATIGLFKQLCEKGRIANPDNPSDLRPNLRIADADDAMQNSASSSRHAPVATKSSASVAKSSRLGPVSAQTSLSNVNPISSTLTSQDGGMRDRPQAPPKSSTGAQRKPLSAPPGARGRAGARAEISV* # PASA_UPDATE: g1980.t1, single gene model update, valid-1, status:[pasa:asmbl_9685,status:3], valid-1 # PASA_UPDATE: g1980.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9683,status:3], valid-1 NODE_851_length_16820_cov_22.836_potentialcontaminant . gene 25 2461 . + . ID=g1980;Name=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . mRNA 25 2461 . + . ID=g1980.t1;Parent=g1980;Name=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . five_prime_UTR 25 97 . + . ID=g1980.t1.utr5p1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 25 767 . + . ID=g1980.t1.exon1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 98 767 . + 0 ID=cds.g1980.t1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 893 1066 . + . ID=g1980.t1.exon2;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 893 1066 . + 2 ID=cds.g1980.t1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 1180 1244 . + . ID=g1980.t1.exon3;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 1180 1244 . + 2 ID=cds.g1980.t1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 1353 1645 . + . ID=g1980.t1.exon4;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 1353 1439 . + 0 ID=cds.g1980.t1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 1734 2461 . + . ID=g1980.t1.exon5;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . three_prime_UTR 1440 1645 . + . ID=g1980.t1.utr3p1;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . three_prime_UTR 1734 2461 . + . ID=g1980.t1.utr3p2;Parent=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . mRNA 25 2461 . + . ID=g1980.t1.1.5b6be70c;Parent=g1980;Name=g1980.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant . five_prime_UTR 25 97 . + . ID=g1980.t1.1.5b6be70c.utr5p1;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 25 767 . + . ID=g1980.t1.1.5b6be70c.exon1;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 98 767 . + 0 ID=cds.g1980.t1.1.5b6be70c;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 893 1066 . + . ID=g1980.t1.1.5b6be70c.exon2;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 893 1066 . + 2 ID=cds.g1980.t1.1.5b6be70c;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 1170 1645 . + . ID=g1980.t1.1.5b6be70c.exon3;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . CDS 1170 1279 . + 2 ID=cds.g1980.t1.1.5b6be70c;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . exon 1734 2461 . + . ID=g1980.t1.1.5b6be70c.exon4;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . three_prime_UTR 1280 1645 . + . ID=g1980.t1.1.5b6be70c.utr3p1;Parent=g1980.t1.1.5b6be70c NODE_851_length_16820_cov_22.836_potentialcontaminant . three_prime_UTR 1734 2461 . + . ID=g1980.t1.1.5b6be70c.utr3p2;Parent=g1980.t1.1.5b6be70c #PROT g1980.t1 g1980 MPRIGLNLSKPNLAAMTPRTAKSSASPGSRASAIRKNATPKAQRSSPSRKKPPMKRSKVSFFRRDIPAVTIIAALPLKNREDIERVLERKPAWAVDKPLRDYLAGASNVHEAKELLGKLSSSEPNVTIYAWDETQNGPTELSDDVELVGRDAHDIVYIMGAPATLNKDTKEYMKNPSEPVNIANMMAKCKSISVGKVHEMECNGKKYVSAPQYGESKGKGKGKGKGAPTSSPLSSSSDGSGSSSTSTIDASESNMSDGSDQDIISKPSTKPSFRNAKGRPTGRAVHHIVIQPTNKDRQRKPVKARLLWSRSSSKPPSSNWTASHSPFPRIR* #PROT g1980.t1.1.5b6be70c g1980 MPRIGLNLSKPNLAAMTPRTAKSSASPGSRASAIRKNATPKAQRSSPSRKKPPMKRSKVSFFRRDIPAVTIIAALPLKNREDIERVLERKPAWAVDKPLRDYLAGASNVHEAKELLGKLSSSEPNVTIYAWDETQNGPTELSDDVELVGRDAHDIVYIMGAPATLNKDTKEYMKNPSEPVNIANMMAKCKSISVGKVHEMECNGKKYVSAPQYGESKGKGKGKGKGAPTSSPLSSSSDGSGSSSTSTIDASESNMSDGSDQDIISKPSTKPSFRNAKGRPTVGHRKGGPSHSHSTHKQRSTTQACQGLNPVPICNVQ* # ORIGINAL: g1981.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 3078 5258 . + . ID=g1981;Name=g1981.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 3078 5258 . + . ID=g1981.t1;Parent=g1981;Name=g1981.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 3078 3113 . + . ID=g1981.t1.exon1;Parent=g1981.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 3078 3113 . + 0 ID=cds.g1981.t1;Parent=g1981.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 3210 5258 . + . ID=g1981.t1.exon2;Parent=g1981.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 3210 5258 . + 0 ID=cds.g1981.t1;Parent=g1981.t1 #PROT g1981.t1 g1981 MAPPDNHPSLELEETSAHEAASLSVPTLVDSPRAEMPACAETAVPMASGGTPLQMLSAATITKAATRSLSSGGQGARRARKNAGSIGGDPQKNVRIAAPPGQNLDIRSFFLTTPAPSTPAAPVPLQSAAPTLSAAKITTETSGSPSSGPGPRSTRKDGGNGGGSDGPQVVEDDHPIHRPNRNFNAVDDDTPAVATAMTDNVEVKDNADDGASATHGRGNASTNGGGRESGIAGTSGNVRIGWLLNMGLTPVYDIRNSAPRTVMTPHAITTYTHTAQPKPARAEVRENVRQTAHGFDVRFHLTVPLEPAAGAALGITGRAAITQETREGSVQLAYVVPTAEWNLALNNILLQYQEHNREETFRKDGLTPFLQGYCKALNALHKVHDTTGVQWVNFCNAQGIYVVVSQTNGASLLATSHEQSRQKARALTAGARASVRDVGGIAVEAHRLVRTIRELRCASVSVLGGDPERAGAVQTNLLMNSSTDAEIRAWLASIAPSNAELQAVEVVPMWEVLRWAGHNTQADMLERGFAAAYVHERLMQPRAFNAHDRVLIECTPPPAANANGNPPTRALYLAVAGNGTFVVASDRSAAAEFNVVPDNGTIFPQSGGWFHLAYRGDPVGRARNEAAFVCPGHRAYRGAIAREFRYVNGNLHSRGSVRIFNVDINEDDTFVTGDGTAGYRFRPISITLAAPAVN* # ORIGINAL: g1988.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 14262 14573 . + . ID=g1988;Name=g1988.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 14262 14573 . + . ID=g1988.t1;Parent=g1988;Name=g1988.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 14262 14573 . + . ID=g1988.t1.exon1;Parent=g1988.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 14262 14573 . + 0 ID=cds.g1988.t1;Parent=g1988.t1 #PROT g1988.t1 g1988 MATQLPPPLSPPTSTTPTNNKDLTLLLLYDDPDLQKQVDHYVAIYKRAAAVSLEEQKAIFGTALRTVVSLSPVDDVHATPRFNPFLLEPFWQVATLLHLWAKL* # ORIGINAL: g1986.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 11746 13097 . + . ID=g1986;Name=g1986.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 11746 13097 . + . ID=g1986.t1;Parent=g1986;Name=g1986.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 11746 12867 . + . ID=g1986.t1.exon1;Parent=g1986.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 11746 12867 . + 0 ID=cds.g1986.t1;Parent=g1986.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 12960 13097 . + . ID=g1986.t1.exon2;Parent=g1986.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 12960 13097 . + 0 ID=cds.g1986.t1;Parent=g1986.t1 #PROT g1986.t1 g1986 MPLLVCRGGRRLRCAPRVAPARQSSSTRLRLTRRCNTVRVWLSSHSTGAGWHAALRALDKKLGDLKPVSQILNETETAIAALDLVRLFVASFVLWILVLNNRAADMNHDDRRKLWVVAMENGHGELGVSRVFELLLTSLPTANHSRAHKLVYEGALAALVDAAGGDSVVLAFDEISCTINVARGMWYHLAEYQQCVSDEAAVRRRKEMETTYGGARGKRDHPTDLFYALRLLMLKMVEDSAIVVHPVFADTDFHIRVVRDIKEKSPMNSRLDVFSAFHAVSFTEVAQFVRKYFGLEVNAELFIPLAGRPRFFGDFAEAVFRHCRAHRPDVLTIDDIKQCVKKATLTSQENLRKLVSKALDLSDLDECMEDLFHKSKVVDIAHAGDVAQTFDDILEGTLETLCVDMTDEPLMRGSSTGCR* # ORIGINAL: g1983.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 7956 9185 . + . ID=g1983;Name=g1983.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 7956 9185 . + . ID=g1983.t1;Parent=g1983;Name=g1983.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 7956 9185 . + . ID=g1983.t1.exon1;Parent=g1983.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 7956 9185 . + 0 ID=cds.g1983.t1;Parent=g1983.t1 #PROT g1983.t1 g1983 MDGSPFNGLPVEVLECHIAPYLSHADRASLAHTCSRLLAVLRNVRLYRLKRQYAIQFVNDAAHRAAVVATLPRHRLVLLLAYVPGTYVDTSIFAGVHTLALVNARVTDVSALAALYALNLSWCEGLPDLRALGRVHTLDLSSTSVTDVSALGRVHTLVLSRCPNLVDVSALGGVHTLNLSGCHGVTDVGALGSVHTLNLSHCRGVSDVGALGRVHTLTLMRCRGVTDASALGRVHTLDLSSAGVTDVSMLGDVHTLDLSWFSGVTVVSALGRVHMLDLSHTKVTDVSALGGVHTLKLHRCDNVRDVSALGGVHTLVLSHTNVTDVSVLGGVRVHALVLSHTNVTDVSALGGVHTLDLSHCTHVADVSMLGGVHTLNLTCLLQGDGRERTRDRPHPCSRARARVHADTTM* # ORIGINAL: g1982.t1 original gene structure, not modified by PASA NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS gene 6713 7840 . + . ID=g1982;Name=g1982.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS mRNA 6713 7840 . + . ID=g1982.t1;Parent=g1982;Name=g1982.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS exon 6713 7840 . + . ID=g1982.t1.exon1;Parent=g1982.t1 NODE_851_length_16820_cov_22.836_potentialcontaminant AUGUSTUS CDS 6713 7840 . + 0 ID=cds.g1982.t1;Parent=g1982.t1 #PROT g1982.t1 g1982 MDGSPFNGLPVEILARHIAPYLSHADRAHLAHTCSGLLAVLRDDRLYMLKARYAVQFARNRNDAYRAEFLAALPYDRIGLQLAHIGGVDMATLGRVHTLNLSGSGILRDVNALGRVHTLNLSGCGLLWDVSALGRVHALDLSGCGRVKDVSTLGGVHTLNLTETGVTDVSALGGVHTLNLSGTHVGDFRMLGGVRKLDLSSTSVSDVRTFGRVHTLDLSSTNVTDVSMLGGVHTLNLSETHVEDVRMLGGVHKLDLSSTNVTDVSMLSGVHTLNLSCTSVSDVSALGGVHTLNISRCHMVTDVSALGRVHTLDLSACTDVTDVSALGRVHVLSLRDMSVRVSMLQTVAILHLSRGSRYAGVRALDPLKIQWHGAG* # ORIGINAL: g5463.t1 original gene structure, not modified by PASA NODE_2953_length_4655_cov_33.6524 AUGUSTUS gene 89 2393 . - . ID=g5463;Name=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS mRNA 89 2393 . - . ID=g5463.t1;Parent=g5463;Name=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 2315 2393 . - . ID=g5463.t1.exon1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 2315 2393 . - 0 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 1954 2063 . - . ID=g5463.t1.exon2;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 1954 2063 . - 2 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 1775 1816 . - . ID=g5463.t1.exon3;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 1775 1816 . - 0 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 1382 1499 . - . ID=g5463.t1.exon4;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 1382 1499 . - 0 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 1082 1126 . - . ID=g5463.t1.exon5;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 1082 1126 . - 2 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 501 576 . - . ID=g5463.t1.exon6;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 501 576 . - 2 ID=cds.g5463.t1;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 89 194 . - . ID=g5463.t1.exon7;Parent=g5463.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 89 194 . - 1 ID=cds.g5463.t1;Parent=g5463.t1 #PROT g5463.t1 g5463 MPTERSRVTVRVPATTANMGPGFDCIGMALDMWNELTVERASVFEVIIEGEGANELPKDTTNLVVEGVEAAFKAAKKPVPTLRYTCKNTIPFARGLGSSSAAITSGLLAGLALAGHELPVAGEEELLQLAAAIEGHPDNVAPAIYGGMQIGIHTGKRWYTTRVNVPHGMQAVLFVPDQGTKTSEARALLKPQ # ORIGINAL: g5464.t1 original gene structure, not modified by PASA NODE_2953_length_4655_cov_33.6524 AUGUSTUS gene 2970 4474 . + . ID=g5464;Name=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS mRNA 2970 4474 . + . ID=g5464.t1;Parent=g5464;Name=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 2970 3071 . + . ID=g5464.t1.exon1;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 2970 3071 . + 0 ID=cds.g5464.t1;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 3212 3280 . + . ID=g5464.t1.exon2;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 3212 3280 . + 0 ID=cds.g5464.t1;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 3403 3513 . + . ID=g5464.t1.exon3;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 3403 3513 . + 0 ID=cds.g5464.t1;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 3912 4084 . + . ID=g5464.t1.exon4;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 3912 4084 . + 0 ID=cds.g5464.t1;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS exon 4306 4474 . + . ID=g5464.t1.exon5;Parent=g5464.t1 NODE_2953_length_4655_cov_33.6524 AUGUSTUS CDS 4306 4474 . + 1 ID=cds.g5464.t1;Parent=g5464.t1 #PROT g5464.t1 g5464 MQYKSTRGGRIGASFEYVVMDGLAEDGGLYVPAAIPNVTPDTLRAWSKLKFQDLFVEIASLFISQSEISKVDLTKLVDRSFSTFRDKSITPVVQLSSDGKIQLLELFHGPTFAFKDVALQFLGNLFEFFLARNNADKRPLIVVGATSGDTGSAAIHGLRGKRNVEVFILHPKGRVAPIQELQMTSVTDANVHNFAVAGTFDDCQVSA* # ORIGINAL: g1612.t1 original gene structure, not modified by PASA NODE_1740_length_9459_cov_39.3361 AUGUSTUS gene 202 1772 . - . ID=g1612;Name=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS mRNA 202 1772 . - . ID=g1612.t1;Parent=g1612;Name=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 1179 1772 . - . ID=g1612.t1.exon1;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 1179 1772 . - 0 ID=cds.g1612.t1;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 850 1002 . - . ID=g1612.t1.exon2;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 850 1002 . - 0 ID=cds.g1612.t1;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 418 566 . - . ID=g1612.t1.exon3;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 418 566 . - 0 ID=cds.g1612.t1;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 202 235 . - . ID=g1612.t1.exon4;Parent=g1612.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 202 235 . - 1 ID=cds.g1612.t1;Parent=g1612.t1 #PROT g1612.t1 g1612 MESPPTESPGTASAAVASQEDKRSTDSQAANGKPDVASAEPTAHQSDDDTPNVDLAAITEDFERSVLQSLERITSGVENVLPDTPSMSPAQSPQPIRKGLAGTASLSGTSPLSSTSSPLMIVSNGDGARAPHSLASSPPSADGLKKPRKLEAVKELVRKERMRIRRIIAENKEVIVAKQKQLAVRQEKVVAEFSRKTKEWEERISEPVFVRFIDKLCFFVCIVSLAITEAILLRNPTMMHKWYTLLIVPLLLIRYYSYHRQKWHFFILDFCYFTQALLVFYLFIYPSSAMLFAAVFVHSNGPVGWSVITW # ORIGINAL: g1614.t1 original gene structure, not modified by PASA NODE_1740_length_9459_cov_39.3361 AUGUSTUS gene 6613 7155 . - . ID=g1614;Name=g1614.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS mRNA 6613 7155 . - . ID=g1614.t1;Parent=g1614;Name=g1614.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 7060 7155 . - . ID=g1614.t1.exon1;Parent=g1614.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 7060 7155 . - 0 ID=cds.g1614.t1;Parent=g1614.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 6613 6762 . - . ID=g1614.t1.exon2;Parent=g1614.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 6613 6762 . - 0 ID=cds.g1614.t1;Parent=g1614.t1 #PROT g1614.t1 g1614 MSTRAKAVLAASCVMCVTVVSYVHIWQLRDRELMYSGVERDLDRQMRKQQNVQELREQYELRKRLIAEEEAAAAKAASASR* # PASA_UPDATE: g1613.t1, single gene model update, valid-1, status:[pasa:asmbl_2496,status:3], valid-1 NODE_1740_length_9459_cov_39.3361 . gene 2129 6314 . + . ID=g1613;Name=g1613.t1 NODE_1740_length_9459_cov_39.3361 . mRNA 2129 6314 . + . ID=g1613.t1;Parent=g1613;Name=g1613.t1 NODE_1740_length_9459_cov_39.3361 . five_prime_UTR 2129 2427 . + . ID=g1613.t1.utr5p1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 2129 2557 . + . ID=g1613.t1.exon1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 2428 2557 . + 0 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 2773 2904 . + . ID=g1613.t1.exon2;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 2773 2904 . + 2 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 3125 3358 . + . ID=g1613.t1.exon3;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 3125 3358 . + 2 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 3803 3903 . + . ID=g1613.t1.exon4;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 3803 3903 . + 2 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 4059 4152 . + . ID=g1613.t1.exon5;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 4059 4152 . + 0 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 4361 4647 . + . ID=g1613.t1.exon6;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 4361 4647 . + 2 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 4971 5099 . + . ID=g1613.t1.exon7;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 4971 5099 . + 0 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 5347 5394 . + . ID=g1613.t1.exon8;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 5347 5394 . + 0 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . exon 5634 6314 . + . ID=g1613.t1.exon9;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . CDS 5634 5930 . + 0 ID=cds.g1613.t1;Parent=g1613.t1 NODE_1740_length_9459_cov_39.3361 . three_prime_UTR 5931 6314 . + . ID=g1613.t1.utr3p1;Parent=g1613.t1 #PROT g1613.t1 g1613 MPSAEDGVGTAAHSEGEELWASILNEAVMNSKKSVLHRNVLVLGDRSSGKSALVSRLRGDAPAAPTDTREGLGLEYSYFDVKDEDADETLARIGVYTLYGDHRFQRVLRFAIDADKFAESLAIITVDISQPWNIIASVTNSLSVLEKHVKALPIASEKAADARKQLEDAFRAQSAESATLDHAVLTNNIGIPIVVVATKSDTIPSTEREFGYRDEHFEFVQQHLRRLCLKYGAGLAFISAKDGQNCALLRRYVVGVLSTGLNNASHGTNTLGNSEDKPSIDKESVFIPIGWDSPAKIALLASTATSTLFSADSPFEDVIRKPTMRRAIAVGDEVRVDPEQAFLHKQQQSLAQFAERLAPAANVTGASAKYDVSTPPSHRARTAASEDGASAGGSGTASPGGAPGAPATGPQGEVLANFFNSLLKKPASSAKLVSSSGSGGVGAPSSATAGAGSAGSGGDAALRKEAAAELDRIRMAGKRTGQK* # ORIGINAL: g1615.t1 original gene structure, not modified by PASA NODE_1740_length_9459_cov_39.3361 AUGUSTUS gene 7462 9355 . - . ID=g1615;Name=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS mRNA 7462 9355 . - . ID=g1615.t1;Parent=g1615;Name=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 8871 9355 . - . ID=g1615.t1.exon1;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 8871 9355 . - 0 ID=cds.g1615.t1;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 8418 8520 . - . ID=g1615.t1.exon2;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 8418 8520 . - 1 ID=cds.g1615.t1;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 8043 8129 . - . ID=g1615.t1.exon3;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 8043 8129 . - 0 ID=cds.g1615.t1;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 7702 7807 . - . ID=g1615.t1.exon4;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 7702 7807 . - 0 ID=cds.g1615.t1;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS exon 7462 7571 . - . ID=g1615.t1.exon5;Parent=g1615.t1 NODE_1740_length_9459_cov_39.3361 AUGUSTUS CDS 7462 7571 . - 2 ID=cds.g1615.t1;Parent=g1615.t1 #PROT g1615.t1 g1615 MNFTPDVLESLRSYRLDWIGKIHAAESFPLPSFTPTVTTAAGAGAEKTVPGEETTEAMEVTMEAAAREGVAGEGEGEGGAVGSNATATATATATATAIATATADATAKAIDTRRAGKKGQKRAEMTAEEIAEQRKKTDERRAASRVRHETTRKMLADGGFDALLVAARFHPKEVADTLLPLLAPSRPFSIFCQYLEPLVECAAHLRSQNKAVLVEIAENWFREYQVLPSRTHPVMTSVPHGGYVLYGTTIAKDASKKPVEAARKRELDGAVAGEEVGDAAVAKRAKTAEEDGHTAL* # ORIGINAL: g10017.t1 original gene structure, not modified by PASA NODE_3774_length_2782_cov_32.6882 AUGUSTUS gene 1 344 . - . ID=g10017;Name=g10017.t1 NODE_3774_length_2782_cov_32.6882 AUGUSTUS mRNA 1 344 . - . ID=g10017.t1;Parent=g10017;Name=g10017.t1 NODE_3774_length_2782_cov_32.6882 AUGUSTUS exon 1 344 . - . ID=g10017.t1.exon1;Parent=g10017.t1 NODE_3774_length_2782_cov_32.6882 AUGUSTUS CDS 1 344 . - 0 ID=cds.g10017.t1;Parent=g10017.t1 #PROT g10017.t1 g10017 MFARFRGPEDSVQARRSLQGGVRGIVKWARRPRQVLMGLFVLFAFVWLLCMRKQVENLCNQGPLNKVSRAGTCPHLIHSFEGDDRDALGPITTEIDSCKTRLNANVASRRQWNN # ORIGINAL: g8153.t1 original gene structure, not modified by PASA NODE_4209_length_2027_cov_31.6404 AUGUSTUS gene 69 1552 . + . ID=g8153;Name=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS mRNA 69 1552 . + . ID=g8153.t1;Parent=g8153;Name=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS exon 69 228 . + . ID=g8153.t1.exon1;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS CDS 69 228 . + 1 ID=cds.g8153.t1;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS exon 437 565 . + . ID=g8153.t1.exon2;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS CDS 437 565 . + 0 ID=cds.g8153.t1;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS exon 859 921 . + . ID=g8153.t1.exon3;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS CDS 859 921 . + 0 ID=cds.g8153.t1;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS exon 1192 1296 . + . ID=g8153.t1.exon4;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS CDS 1192 1296 . + 0 ID=cds.g8153.t1;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS exon 1439 1552 . + . ID=g8153.t1.exon5;Parent=g8153.t1 NODE_4209_length_2027_cov_31.6404 AUGUSTUS CDS 1439 1552 . + 0 ID=cds.g8153.t1;Parent=g8153.t1 #PROT g8153.t1 g8153 NPQVAGSLHYIDPYRPNEYIEAITSVGEVLSSYDSDNLYPVYGFGAKIPPEMQVSHCFPCNFNHANPMVQGLSGILDTYNAAIRTVVLHGPTVFAGILRAMKNIAHESVNEHRNQYFILLIITDGVINDMDATVDEVVALSFLPVSIVIVGVGAADFANMNVLDADDVPLRDHSGRLMDRDIVQVGVCV* # ORIGINAL: g12076.t1 original gene structure, not modified by PASA NODE_4822_length_1223_cov_29.7038 AUGUSTUS gene 248 1223 . - . ID=g12076;Name=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS mRNA 248 1223 . - . ID=g12076.t1;Parent=g12076;Name=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS exon 1001 1223 . - . ID=g12076.t1.exon1;Parent=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS CDS 1001 1223 . - 0 ID=cds.g12076.t1;Parent=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS exon 623 736 . - . ID=g12076.t1.exon2;Parent=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS CDS 623 736 . - 2 ID=cds.g12076.t1;Parent=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS exon 248 351 . - . ID=g12076.t1.exon3;Parent=g12076.t1 NODE_4822_length_1223_cov_29.7038 AUGUSTUS CDS 248 351 . - 2 ID=cds.g12076.t1;Parent=g12076.t1 #PROT g12076.t1 g12076 PSCPLPCRLGRAQASDEAPCQFELFPHALQFSNVHNAEDTLRPSLIPDAPIYLPDGSDFSMAAGDFLDIYREEGGDWDCVVTCFFLDTAHNIIDYVERILHILKDGGVWINMGPLLYHFEDTPGERSLELTHGELKSVAQQLGFVFE # PASA_UPDATE: g607.t1, single gene model update, valid-1, status:[pasa:asmbl_4475,status:12], valid-1 NODE_2513_length_6042_cov_36.6214 . gene 593 5957 . - . ID=g607;Name=g607.t1 NODE_2513_length_6042_cov_36.6214 . mRNA 593 5957 . - . ID=g607.t1;Parent=g607;Name=g607.t1 NODE_2513_length_6042_cov_36.6214 . five_prime_UTR 5702 5957 . - . ID=g607.t1.utr5p1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . five_prime_UTR 5456 5464 . - . ID=g607.t1.utr5p2;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 5702 5957 . - . ID=g607.t1.exon1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 5357 5464 . - . ID=g607.t1.exon2;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 5357 5455 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 5104 5217 . - . ID=g607.t1.exon3;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 5104 5217 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 4835 4954 . - . ID=g607.t1.exon4;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 4835 4954 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 4495 4617 . - . ID=g607.t1.exon5;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 4495 4617 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 4063 4196 . - . ID=g607.t1.exon6;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 4063 4196 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 3723 3861 . - . ID=g607.t1.exon7;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 3723 3861 . - 1 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 3132 3506 . - . ID=g607.t1.exon8;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 3132 3506 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 2886 2984 . - . ID=g607.t1.exon9;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 2886 2984 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 2642 2740 . - . ID=g607.t1.exon10;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 2642 2740 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 2117 2242 . - . ID=g607.t1.exon11;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 2117 2242 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 1655 1840 . - . ID=g607.t1.exon12;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 1655 1840 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 1194 1330 . - . ID=g607.t1.exon13;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 1194 1330 . - 0 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . exon 593 979 . - . ID=g607.t1.exon14;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . CDS 823 979 . - 1 ID=cds.g607.t1;Parent=g607.t1 NODE_2513_length_6042_cov_36.6214 . three_prime_UTR 593 822 . - . ID=g607.t1.utr3p1;Parent=g607.t1 #PROT g607.t1 g607 MDVMRVLAAPDLDVRKKTLALVLELVTPRNVEEVVLVLKKELSRSSSGDDFDKSGDYKQLLVQALHTCGIKHPSIAASIVPMLMDYVGDTNAASASDVVHFVREAIERFPKLRPQILQGLLQAVPQIKAGKVFRVALWIAGEYAEATEEIEQAFAIINESLGELPIVDSLVRAAAGDSNAPDAPKSAAAAPAAPTARLLASDGSYASQSALTSSSRTTESKVAEERPSLRTLLIAGDFFLGAVLSAALVKLSLRYTQLLGADGAKRANKVAAEALLSIASIIHLGQSGLTETPIDEDSRERMNACLRTLTEPTPLVLGVFEHGCREAFSSMLQRTQQAESAAEALEKARTSLAVQPDDLIAFRQLGPKSSAGAEEDVFAASLLAATGANESKDKSTSKLNKVFQLTGFSDPVYAEAYVNVNQYDIVLDVLVVNQTGDTLQSLSLELATLGDLKLVERPTAYTLGPHDVCNIRANVKVSSTENGIIFGNIVYDLTGSSSDRNCVVLNDIHIDVMDYITPGDCTDADFRRMWVEFEWENKVAVATVCTDLNQYLRHIIGSTNMRCLTPESALAGDCGFLAANLYARSIFGEDALANVSIERTAEGKIAGHIRIRSKTQGIALSLGDKITHNQEVIAA* # ORIGINAL: g606.t1 original gene structure, not modified by PASA NODE_2513_length_6042_cov_36.6214 AUGUSTUS gene 49 302 . + . ID=g606;Name=g606.t1 NODE_2513_length_6042_cov_36.6214 AUGUSTUS mRNA 49 302 . + . ID=g606.t1;Parent=g606;Name=g606.t1 NODE_2513_length_6042_cov_36.6214 AUGUSTUS exon 49 302 . + . ID=g606.t1.exon1;Parent=g606.t1 NODE_2513_length_6042_cov_36.6214 AUGUSTUS CDS 49 302 . + 2 ID=cds.g606.t1;Parent=g606.t1 #PROT g606.t1 g606 ITMCELAVRERPYYNWKGHAHALLVMISTDPECRPELPEGTPHEYAALSRKCTAHNPSKRPSFAEILPALECMMDVNAVTADI* # PASA_UPDATE: g6264.t1, single gene model update, valid-1, status:[pasa:asmbl_8470,status:3], valid-1 NODE_60_length_47494_cov_40.8934 . gene 39020 41623 . + . ID=g6264;Name=g6264.t1 NODE_60_length_47494_cov_40.8934 . mRNA 39020 41623 . + . ID=g6264.t1;Parent=g6264;Name=g6264.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 39020 39160 . + . ID=g6264.t1.utr5p1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 39020 39498 . + . ID=g6264.t1.exon1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 39161 39498 . + 0 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 39663 39729 . + . ID=g6264.t1.exon2;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 39663 39729 . + 1 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 39923 39985 . + . ID=g6264.t1.exon3;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 39923 39985 . + 0 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 40283 40394 . + . ID=g6264.t1.exon4;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 40283 40394 . + 0 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 40860 41051 . + . ID=g6264.t1.exon5;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 40860 41051 . + 2 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . exon 41299 41623 . + . ID=g6264.t1.exon6;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . CDS 41299 41387 . + 2 ID=cds.g6264.t1;Parent=g6264.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 41388 41623 . + . ID=g6264.t1.utr3p1;Parent=g6264.t1 #PROT g6264.t1 g6264 MATTAYAYGRPPPPPQSQPSHATSAQATTHQGGPVAGAAAGTDPPAIIAPNRLPSFLAECLRTGVVSGFKHFRMYLRGREELLVTVYNDRATPHHSRASSAVNLHKAPSFRTLFSGHGENSPAPASPSMNEGTLEDPDETAFLLAAYARYKCPYVWLRTNHRRLLALTSPENSVSVDRDRPVRLRTTEEWKVRDVKAWEIIAEIVRVGVRPPPSNPFAIDRAMFSDMSSMEVVLATGALLNFLIKVYTSPECTFSDKVLEDIRFLLRRHPGDLTDSFQAGFPQSPR* # ORIGINAL: g6263.t1 original gene structure, not modified by PASA NODE_60_length_47494_cov_40.8934 AUGUSTUS gene 36107 38454 . - . ID=g6263;Name=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS mRNA 36107 38454 . - . ID=g6263.t1;Parent=g6263;Name=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 38375 38454 . - . ID=g6263.t1.exon1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 38375 38454 . - 0 ID=cds.g6263.t1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 37970 38003 . - . ID=g6263.t1.exon2;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 37970 38003 . - 1 ID=cds.g6263.t1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 37747 37818 . - . ID=g6263.t1.exon3;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 37747 37818 . - 0 ID=cds.g6263.t1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 37070 37603 . - . ID=g6263.t1.exon4;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 37070 37603 . - 0 ID=cds.g6263.t1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 36652 36828 . - . ID=g6263.t1.exon5;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 36652 36828 . - 0 ID=cds.g6263.t1;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 36107 36436 . - . ID=g6263.t1.exon6;Parent=g6263.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 36107 36436 . - 0 ID=cds.g6263.t1;Parent=g6263.t1 #PROT g6263.t1 g6263 MGDFEGLSALIERKQREFEDLQSKLGRSAGRALGTPVTRRIDTDRSVRRPRVEDAIEDDAEKPSILSAIAVVGHALVREHDRHNDDERRGRGDTGGVRERERERDRDRDRERVRDRDRDRDRHEDDAGGRDDRRRSRDGVADGRRESLGRSRGEGHRQQHVTTHPPPHPNASERTRRVRDIDEGHDYDRVRVRAPSHGNGTEGEAPARRKMSAGVGGRERRLFGMLMGTLQQAQKETSAIDVNRAEIDSKLDERLQKDRKDADAAIEKSREEKAAMELQARIMKAELLRLRLKMHDALQDKDRAERAGLLGNFIRTSAEPHIYYLPKTHTEETSALLDASREREQAGLAEWRRSRPSLDDETPVDDTVIAGNDASAPNADASMDRSDENGPAADVRADVHMAESDRSD* # PASA_UPDATE: g6261.t1, single gene model update, valid-1, status:[pasa:asmbl_8476,status:12], valid-1 NODE_60_length_47494_cov_40.8934 . gene 25841 33676 . - . ID=g6261;Name=g6261.t1 NODE_60_length_47494_cov_40.8934 . mRNA 25841 33676 . - . ID=g6261.t1;Parent=g6261;Name=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 33633 33676 . - . ID=g6261.t1.exon1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 33633 33676 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 33104 33458 . - . ID=g6261.t1.exon2;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 33104 33458 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 32857 32918 . - . ID=g6261.t1.exon3;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 32857 32918 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 32586 32684 . - . ID=g6261.t1.exon4;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 32586 32684 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 31579 32380 . - . ID=g6261.t1.exon5;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 31579 32380 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 31215 31460 . - . ID=g6261.t1.exon6;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 31215 31460 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 30756 31040 . - . ID=g6261.t1.exon7;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 30756 31040 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 30404 30550 . - . ID=g6261.t1.exon8;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 30404 30550 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 30162 30284 . - . ID=g6261.t1.exon9;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 30162 30284 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 29338 30002 . - . ID=g6261.t1.exon10;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 29338 30002 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 29057 29184 . - . ID=g6261.t1.exon11;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 29057 29184 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 28692 28882 . - . ID=g6261.t1.exon12;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 28692 28882 . - 2 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 28268 28540 . - . ID=g6261.t1.exon13;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 28268 28540 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 28040 28124 . - . ID=g6261.t1.exon14;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 28040 28124 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 27615 27792 . - . ID=g6261.t1.exon15;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 27615 27792 . - 2 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 27225 27356 . - . ID=g6261.t1.exon16;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 27225 27356 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 26849 26972 . - . ID=g6261.t1.exon17;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 26849 26972 . - 1 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 26633 26729 . - . ID=g6261.t1.exon18;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 26633 26729 . - 0 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . exon 25841 26408 . - . ID=g6261.t1.exon19;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . CDS 26230 26408 . - 2 ID=cds.g6261.t1;Parent=g6261.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 25841 26229 . - . ID=g6261.t1.utr3p1;Parent=g6261.t1 #PROT g6261.t1 g6261 MEHEAALECPHCAAAIKPRNPLPSGVYSGRCRNCSKSFTFRSVRQGSDADAPTQRVARASSNASTVFAGSTELNFVLNGRNIRIANPDPTVTLNAYIRSQRSMTGTKRSCNEGGCGACVVAMSRNGATVAVNSCLKPLCAVDGWTITTTEGIGSNKAGFHPVQEKIASGNGSQCGFCTPGMVMSMYSLLQSNPTPTMQNVEDAFDGNLCRCTGYRPILEAFKSFAVDAPHHLKFGGIKDIEEAVRKVTPAEASSSSCGSNAGACCSSSSPSTSASTSCGSDGVCGCRSAPGPNACGGDMPKCSFRPIGTSCPGVASCGIPSSAISGGTVPCASSCGAAPIRALRFSANGVTWFRPTTLADTFLLMHEYAGTYKLVAGNTGTGIFKDDTAPVLIDIREIPDLSVVSADAKQGVTVGAAITINGLIATLTANSALSASYATAVDHLKKVAGPPIRNAATWAGNLMLVHNHADFPSDVCTVLAGLGASIRVESVTGTTVVSVFDLLSLDMSGRIIASVTIPVLAPGEVYMSYKVMPRHTNSHAYVNAAFRFTLNASQKITSRPLLVYGGIGPLVLRAASTEAFLVGKTLTDLTTLSGAVGSLMNELVPDNPPVSASADYRRGLGVSLLYKFIVQLLGAKADPRVQSAGTTFVRPVSSGTQTFTSDQSEFPVSQPVVKLSSHLQASGEAQYTEDIAPPTGTLFGAFVVSTVASATIGTIDATAALAMPGVARFLTAKDIPTGGQNNCSPDTPEELFCSGTVLYAGQSLGLILADTQAHADAAAKAVSVTYTNVQKPILTISDAIAAKKFFDNPIPPLAMGDVDAAFPTCAHVIEGSIDCGSQYHFHLETQVALAVPQDNGGFTVHSAAQWPDYVQKSVAQTTGVPLSMVSVEVKRVGGAYGGKITRNLSTASAAAVAASVMGCAVRIAVNIQTNMEMIGKRHPFLANYKVGFDNNGVLTAVQLDYYVDSGCNMNDSPGCVAMAFDACDNAYYAPNWKVTGYLCQTNTPCNTAMRAPGCVPAIFIIETVVDHVARSLGLDADTVRFNNIIKDGQSTPYGQTVANCTLPTVWANLKTQADYDNRKAAVVDFNAKNRWRKRGITLMPLKYGIAWGGYTCGGYVTVYADGTVAITHSGCEIGQGINTKVAQVAAYTLGVDMGNIIIRQTRTDMHPNAAPTGGSITSELNCAAVQQACKNLLAVIDPIRKTLPATAKWTDVIGACLGQGADLSARAWYLGGSTGPFNYSSFGATCVEVEVDVLTGESQIIRADIVFDCGVSLSPLIDLGQVEGGFVQGLGYWMSEKLTFDTDSGRLLSNGTWEYKPPAAKDIPIDFRITLLQNTPNPDGFLRSKASGEPPYCMACSSLFALKNAVIAARAEIGKDKDYFAVGGPFTVDAVRQAALVDPAQFKF* # PASA_UPDATE: g6259.t1, single gene model update, valid-1, status:[pasa:asmbl_8474,status:12], valid-1 NODE_60_length_47494_cov_40.8934 . gene 13738 18012 . - . ID=g6259;Name=g6259.t1 NODE_60_length_47494_cov_40.8934 . mRNA 13738 18012 . - . ID=g6259.t1;Parent=g6259;Name=g6259.t1 NODE_60_length_47494_cov_40.8934 . exon 16653 18012 . - . ID=g6259.t1.exon1;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . CDS 16653 18012 . - 0 ID=cds.g6259.t1;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . exon 15075 16374 . - . ID=g6259.t1.exon2;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . CDS 15075 16374 . - 2 ID=cds.g6259.t1;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . exon 13738 14871 . - . ID=g6259.t1.exon3;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . CDS 13932 14871 . - 1 ID=cds.g6259.t1;Parent=g6259.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 13738 13931 . - . ID=g6259.t1.utr3p1;Parent=g6259.t1 #PROT g6259.t1 g6259 MPSTVGTRWPFRRISGRLLLTLVLLVAASNFAVVVWLNSVDTMPWSTSLDDRDEDYGQIDAHKQLFPGVLAHKPSRENDAIAAQGDGGVGSPDLGAGVFRGLDVIRKRWSRGETKVEAADVDGQVQQQEHPPLSAVEAEVTFGIKTTGFHLDALRAIESIRKFYPRARILVADDGGYDEIPYTFVGLLKHDPLLEYHLLPFDAGLSAGRNFLVSRTQTPYFMVVDDDFVFTEDTRVERLLEVSELHDIDIVAASVGDRKGMCNRFSVQDHVLLLVPDGSETVAENCIRCEFVANFFLARTCALREVTWDPVLKLAEHEDMFLRLRAAGVSVALCPDIVVRHLQRASNARHARVFGDGQSYDSMRKRASELIVSVVLPKHSLRGMGYLTDTKQGRAFGNVTEEWVRDHILRWRWTTSVKLNRDEAFFPPRCAATSPVSVVDMAKVKTYHMAYCEDVSQFTQDDIMETDVYINMPQFHVSKSVVKEIENACIEAVAAHNAEYRLLRDVAYSYSRWRRADKRFDRMHGTEYQLEMEASVGEDPSLVTGRPAQSGNKRNAGRATVVLKLSLFRSIYPGVLSAVTAVTTNEDVPVYFVLPITCDNERLGRFLSDITQLHSIASVTLIVVVYPPGEFKPLEMQLRRARLRSEIVRMPLDNKFSRAGGLQAGLDRVPSNDSIVFFVDADIIMPQNFAEIVRNRVIMRRQVYMPVVFSFLEGRSHEMLLENNGWNTVSVYSKYGWWRKGGMGMLGAFAGDIRFVGGYNVEAFKTRWGSEDTDMARRLMHAGYKIARPLEPFYWHCFHAKRGWGGLPDNIAPPMHDAGGGIGARDQVDAPPRVKIYVYDLPKEFRDDVIADNQNNLGVRSEKFKMGRDEYDCLRNMFSIEVYMKEFIEGSPFHARNASNANFFYVPVPSVCHMNNALPFNSSRSGDFHRRLIDHISQMYPYWNRHQGADHVFVASQGRGRALFQNSRLFRNTIVLTVNGDRANTAAYDMMRDIVIPPYISDMDEQPGYDGRGDPSDVARMSRVFFMGSTKDWMPAYSGGVRQYIRTNFANLGGWSVVSRVGMMTVDLRDKFKASMRGSQLSLCPEGLYPYTPRVKESALAGTVPVILSRTLVHPFESALDYRSFAVWAPQAGGVPGIEKLPALLEQVDDAELAAKRRNLVRAAKALTYHKVAVEGDALHMIAAELANVLEKRAASTVL* # ORIGINAL: g6256.t1 original gene structure, not modified by PASA NODE_60_length_47494_cov_40.8934 AUGUSTUS gene 2026 4559 . + . ID=g6256;Name=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS mRNA 2026 4559 . + . ID=g6256.t1;Parent=g6256;Name=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 2026 2045 . + . ID=g6256.t1.exon1;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 2026 2045 . + 0 ID=cds.g6256.t1;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 2301 2418 . + . ID=g6256.t1.exon2;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 2301 2418 . + 1 ID=cds.g6256.t1;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 2676 3044 . + . ID=g6256.t1.exon3;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 2676 3044 . + 0 ID=cds.g6256.t1;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 3465 3774 . + . ID=g6256.t1.exon4;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 3465 3774 . + 0 ID=cds.g6256.t1;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 3994 4559 . + . ID=g6256.t1.exon5;Parent=g6256.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 3994 4559 . + 2 ID=cds.g6256.t1;Parent=g6256.t1 #PROT g6256.t1 g6256 MSVYLFSDDLDAMSSSAVISSCNSNLIASQRRPWSVLLLSTQSTSRVVLSISHAICDGQSIKTLFSEFVIGCNALMSLAPSDHASGCAPYHHILSTLLPPLPHPATWEQLLPKRYATIRSRCRALLSLFGIVKGSMAVEQGMHFAREDVSNRLKPMDPEGPVACIAGERVIEGEDYARIKTAAKSHGVSVHAVIATSLVFAVVDRLLRDERLDRMGVSSSTGVLSIPTYQTVDLRCRADDDTFLHVNDVAYVAAPCIGSVPFPLANYIQGGSAANEHIVFWSVARRMHGDLHADADSGQPWCLLAALSSLIPDAEAARRGIPRGQPHRAVPMPFALANIGLMSRATSHCRNEVHAAVDDSIDCANSDGASVNEQCNEGIEKKTSAESLAATRVPSQPMRVTKASIYHAGHGVISGLWVTCAGTEEALVITWTGGERIVDKDIAALFLNDAICHALSNSRH* # ORIGINAL: g6258.t1 original gene structure, not modified by PASA NODE_60_length_47494_cov_40.8934 AUGUSTUS gene 10061 13022 . - . ID=g6258;Name=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS mRNA 10061 13022 . - . ID=g6258.t1;Parent=g6258;Name=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 12963 13022 . - . ID=g6258.t1.exon1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 12963 13022 . - 0 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 12703 12770 . - . ID=g6258.t1.exon2;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 12703 12770 . - 0 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 11964 12468 . - . ID=g6258.t1.exon3;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 11964 12468 . - 1 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 11290 11542 . - . ID=g6258.t1.exon4;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 11290 11542 . - 0 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 11012 11077 . - . ID=g6258.t1.exon5;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 11012 11077 . - 2 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 10565 10663 . - . ID=g6258.t1.exon6;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 10565 10663 . - 2 ID=cds.g6258.t1;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS exon 10061 10344 . - . ID=g6258.t1.exon7;Parent=g6258.t1 NODE_60_length_47494_cov_40.8934 AUGUSTUS CDS 10061 10344 . - 2 ID=cds.g6258.t1;Parent=g6258.t1 #PROT g6258.t1 g6258 MKRPELQKICKAAGIKANLKNVELIEAYWEHQTSATPAAATDSAMDTDIIALPATSTDTAQTTMTLPSIEPVASIEISAPVEAAVVAPVTPVPAPSTRRRTYDLEESAAVICKQKTPRKEVSTGVAVPATTEALAVSESAKTEDSIVPVVFAVSEDVSTMDALKAALMSEVDKRVGIVSVVATGKKTGTKGAAAKSMTPKSKKNWDKIHTQTFEKMESIDDYLLKKKGNGGGITKATAKKGIVDSRKSIGSELKLAAVARAVETAQQIKAKNVGFTPSDIALKAVTPARPMMGGKASAFTPKAKTPAADMKSVSKFNSVAKTPLCAEDARRKSIAKAQVAQGASKIPIARAILRPSSKSNAIDNSSATPAAPVKAAKSTATAHPDPKVAHVQRSLEESHMRRSSNAFEELKIRRKSAVEAFRRLSAGTMQRMRRTGALPKGIVA* # PASA_UPDATE: g6260.t1, single gene model update, valid-1, status:[pasa:asmbl_8467,status:3], valid-1 NODE_60_length_47494_cov_40.8934 . gene 20141 25642 . + . ID=g6260;Name=g6260.t1 NODE_60_length_47494_cov_40.8934 . mRNA 20141 25642 . + . ID=g6260.t1;Parent=g6260;Name=g6260.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 20141 20437 . + . ID=g6260.t1.utr5p1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 20141 20683 . + . ID=g6260.t1.exon1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 20438 20683 . + 0 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 20919 21197 . + . ID=g6260.t1.exon2;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 20919 21197 . + 0 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 21343 21931 . + . ID=g6260.t1.exon3;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 21343 21931 . + 0 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 22176 22322 . + . ID=g6260.t1.exon4;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 22176 22322 . + 2 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 22525 23804 . + . ID=g6260.t1.exon5;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 22525 23804 . + 2 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 24039 24372 . + . ID=g6260.t1.exon6;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 24039 24372 . + 0 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 24554 24737 . + . ID=g6260.t1.exon7;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 24554 24737 . + 2 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 25042 25205 . + . ID=g6260.t1.exon8;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 25042 25205 . + 1 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . exon 25414 25642 . + . ID=g6260.t1.exon9;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . CDS 25414 25580 . + 2 ID=cds.g6260.t1;Parent=g6260.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 25581 25642 . + . ID=g6260.t1.utr3p1;Parent=g6260.t1 #PROT g6260.t1 g6260 MEFLDLSAVPLHIQARSKVLVGGTIGLALVLTSVFPSAGLVVVFCVASSVIGASLAHFVWQRFEFFPSIWLPAYARKAARAAQAAAAAAKAAASHSLGHDRTSEVSRRESAFGDKRPVVIVPKKFNAGVEKFIDRVLSEFVWSWYKEISSDPSFVEELRGLFTHAVLVLADRTVKVNLPEIVIRKVIPVFLEYLDAHSRAVGQLKRGDPDAIGKSVVDLTFSQLGAGRHHATLGVEAELAYLRHFSGRLLPLLFPAAVCSSKATLCLVREIVAGSLLKPAIQSACNPDLLNRQLINALADDPPGSILPMSVLLAGVEYVPLLRGYGGTRVYPTAFATTLPNLLSSREMLFAFMKFMEAQEAIPVLQFCLTVETYNEQVSQGVAGSEEVAAQARDVFQMYIAPEGQASLGFPSDIVDAVKEAVIMGSASRGQYSHTTDVRTSSLPIGTCFVRAYNHAYDLLEKRYFPLFIQSDLYFELVCNGGKLTGASDALVGSLLGSRKAGGPAAGAAGAVQRRPPSTGAPSSSVSSAASDKSKRASFQPSQSQSQSQSQSQSQSQQKGAPSRSPSIAKKSPSPSQAQQNTRKDAPVEVAQPQHQQSEASLKVQSDLTSGAPIASMAGDVTSSTVSANTDASQSTDLNLLSMGDQSMLTDALRDASRAATPTPTVEAGALVQSLSVSVPSSPRPPERDSERARERDSRNGDASADSAPASGVDESSGDELSGGRPLRRRTSVKSPRLSVDMLNSDEFRAVDMGGWEVHVTAHQAVGHGTKRHVEYVIDVVRHDGPTSPQSHWTTPRRYNDFDALHNRLKETHESLADVDLPGKRAFGNFDRGFLDGRMRALDNYLQFLLSHASLCGDRVLYAFLQPSDAFARIMREGEADSDLGRFLKSVPSKLKKMDVLLAPFHSENLAPEMPTSVVAMRQAAARMRPNNSALDLAAIGAHSSRKGALPASPSGDDDGGYFGDVSAPTEKVEITGVADAVVYFVWRLTPAVQRRPWLRNALSALRVAASHTLDDFAAWKIQTKIERYTTEKELVELMELLEDGIFGDAPVRTDEDKANTRAQCLADLISFFPDPLQMMIGKGAVREGLTDAFNLLQEPELTKHILYVVMDIVFAELFPELDTGDAQS* # PASA_UPDATE: g6262.t1, single gene model update, valid-1, status:[pasa:asmbl_8468,status:3], valid-1 # PASA_UPDATE: g6262.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8469,status:12], valid-1 NODE_60_length_47494_cov_40.8934 . gene 34590 35781 . + . ID=g6262;Name=g6262.t1 NODE_60_length_47494_cov_40.8934 . mRNA 34590 35781 . + . ID=g6262.t1;Parent=g6262;Name=g6262.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 34590 34665 . + . ID=g6262.t1.utr5p1;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . exon 34590 34939 . + . ID=g6262.t1.exon1;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . CDS 34666 34939 . + 0 ID=cds.g6262.t1;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . exon 35068 35781 . + . ID=g6262.t1.exon2;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . CDS 35068 35366 . + 2 ID=cds.g6262.t1;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 35367 35781 . + . ID=g6262.t1.utr3p1;Parent=g6262.t1 NODE_60_length_47494_cov_40.8934 . mRNA 34590 35781 . + . ID=g6262.t1.1.5b6be70c;Parent=g6262;Name=g6262.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 34590 34665 . + . ID=g6262.t1.1.5b6be70c.utr5p1;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . exon 34590 34939 . + . ID=g6262.t1.1.5b6be70c.exon1;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . CDS 34666 34939 . + 0 ID=cds.g6262.t1.1.5b6be70c;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . exon 35068 35298 . + . ID=g6262.t1.1.5b6be70c.exon2;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . CDS 35068 35298 . + 2 ID=cds.g6262.t1.1.5b6be70c;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . exon 35432 35781 . + . ID=g6262.t1.1.5b6be70c.exon3;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . CDS 35432 35676 . + 2 ID=cds.g6262.t1.1.5b6be70c;Parent=g6262.t1.1.5b6be70c NODE_60_length_47494_cov_40.8934 . three_prime_UTR 35677 35781 . + . ID=g6262.t1.1.5b6be70c.utr3p1;Parent=g6262.t1.1.5b6be70c #PROT g6262.t1 g6262 MLGGSGCITSADRALPPAADCSSGSVPGKCSADNAQTMEANTPPAALSEDGQLLHVAAPPGPGGDLPVRVGVDVGGVLLKSFETADTGSEDHHTEQRAVEGAFESLARLVDYFGAQNVFVISKCGDRMAARILDFFERERVYEHTGLQRENVRFCRERREKAGICQELGMNAQLLFSHRHSLDAQGMSVQ* #PROT g6262.t1.1.5b6be70c g6262 MLGGSGCITSADRALPPAADCSSGSVPGKCSADNAQTMEANTPPAALSEDGQLLHVAAPPGPGGDLPVRVGVDVGGVLLKSFETADTGSEDHHTEQRAVEGAFESLARLVDYFGAQNVFVISKCGDRMAARILDFFERERVYEHTGLQRENVRFCRERREKAGICQELGITHFVDDSMEVHHHLHGTVPNRIILAPTAVDIQRWSERGSEKIADVHRAKDWADVMGYLLSGQQHVGVRASPASDSVAEL* # PASA_UPDATE: g6257.t1, single gene model update, valid-1, status:[pasa:asmbl_8466,status:3], valid-1 NODE_60_length_47494_cov_40.8934 . gene 6421 9192 . + . ID=g6257;Name=g6257.t1 NODE_60_length_47494_cov_40.8934 . mRNA 6421 9192 . + . ID=g6257.t1;Parent=g6257;Name=g6257.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 6421 6473 . + . ID=g6257.t1.utr5p1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . exon 6421 6507 . + . ID=g6257.t1.exon1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . CDS 6474 6507 . + 0 ID=cds.g6257.t1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . exon 6918 7045 . + . ID=g6257.t1.exon2;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . CDS 6918 7045 . + 2 ID=cds.g6257.t1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . exon 7284 7363 . + . ID=g6257.t1.exon3;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . CDS 7284 7363 . + 0 ID=cds.g6257.t1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . exon 7725 7851 . + . ID=g6257.t1.exon4;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . CDS 7725 7851 . + 1 ID=cds.g6257.t1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . exon 8189 9192 . + . ID=g6257.t1.exon5;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . CDS 8189 8857 . + 0 ID=cds.g6257.t1;Parent=g6257.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 8858 9192 . + . ID=g6257.t1.utr3p1;Parent=g6257.t1 #PROT g6257.t1 g6257 MASRVFRWGILGTGRIAHDFTLALTVVEDARVVAVGSRSESSAAKFAQDHNISKSYGTYEELVNDAEIDIIYVATPAAAHRDNVLLALGHNKHVLCEKPFALNAKQAAEMIQSAQEKKLFLMEANWMPFFPLIKKTRELIAAGAIGEIKNVASDLGWVNDHAANPSILDPAQGGGSLLAAGVYSVSLPSFIFGEVSPATVSATGSIHASGVDERVVACLSYSNGRTAVAGSAIDCAVASDAVISGTKGRIRIHGIFVCPTAITLTPWFSTGLPEETFSSPVPQIEGSFNFPNSSGLSYEARAVQAHIAEGKTESDVVTHALTLGVMKTLDAIRGQIGVVYPGESS* # PASA_UPDATE: g6265.t1, single gene model update, valid-1, status:[pasa:asmbl_8477,status:3], valid-1 NODE_60_length_47494_cov_40.8934 . gene 41782 47309 . - . ID=g6265;Name=g6265.t1 NODE_60_length_47494_cov_40.8934 . mRNA 41782 47309 . - . ID=g6265.t1;Parent=g6265;Name=g6265.t1 NODE_60_length_47494_cov_40.8934 . five_prime_UTR 46852 47309 . - . ID=g6265.t1.utr5p1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 46448 47309 . - . ID=g6265.t1.exon1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 46448 46851 . - 0 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 46095 46261 . - . ID=g6265.t1.exon2;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 46095 46261 . - 1 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 45680 45699 . - . ID=g6265.t1.exon3;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 45680 45699 . - 2 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 45404 45540 . - . ID=g6265.t1.exon4;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 45404 45540 . - 0 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 45092 45262 . - . ID=g6265.t1.exon5;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 45092 45262 . - 1 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 44780 44885 . - . ID=g6265.t1.exon6;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 44780 44885 . - 1 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 44532 44617 . - . ID=g6265.t1.exon7;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 44532 44617 . - 0 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 43920 44362 . - . ID=g6265.t1.exon8;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 43920 44362 . - 1 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 43643 43740 . - . ID=g6265.t1.exon9;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 43643 43740 . - 2 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . exon 41782 43369 . - . ID=g6265.t1.exon10;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . CDS 42077 43369 . - 0 ID=cds.g6265.t1;Parent=g6265.t1 NODE_60_length_47494_cov_40.8934 . three_prime_UTR 41782 42076 . - . ID=g6265.t1.utr3p1;Parent=g6265.t1 #PROT g6265.t1 g6265 MAAEVSCRALAEHDDMATAVLVDAVLGFRTHKMNPRFRPRKTDAALLRSLLWGLRTPDDAARAYDRLLADAPQWSSSLALNGALGGGGVYGAAFREHAMRYLGMYRPEAGYSIVLCDRYSSTEHQEAKVQATRKWCKGDRIVQLCGCIAEIPKCDEETFLRPGQNDFSVMYSTRKGCAQLWLGPAAYINHDCEPNCKFVSTGRNTACVVVSRDIEEGEEITCFYGKNFFGERNEHCRCETCERRGEGAFTDIRTGDGLSVEGDESQAPKYSLRRKRPRFDANAPSPDDDDDDNDGTSSSRPPGVGAAAAVGSGRYRETVFVNPLDDDEPFWWPAMVVPVKELDSSMPRPKDGHCVVRYFEDNSYSTADTSEMRLLSEDSGMFAECALRQGDEFTMNRSVQRAVRYLRTGLLPKGFRWPHWSDDVPTHVPTHVPQVPCMLRGAKREARVRGSGMAASRESQPTSDDDVPLASIALSLQTQTSSRTGKGRPVTCAVARLTKFHSTRSSSAIARDLRRSDRKRALVVAVSSEDAGEDAPASKHQCVRRSVSVDSDGSLSARSATSIGSASSLSSMRSTGSSGRFAHTSTIANGRRPGNQEQQSRHGVIGRHSMRTRAHMTATPDSNGLASVKEEPMDDAAPDSATHDSRQSTPVARAATECNALAHVDEIDPRSAPPSEGAVVFEPSSPDVGRRPLRTVRPRARDKAEVEVEAGAWAGADHVTDHVSAVQLGRTRRSSRLSSSLSHSAGETVSHADGDAEEAVMCIVTAAATTGVCVPVDIVMVDDGMDSDDAQIDVVGSPLSCNGPPAACGLRDGGRTHTLLPHEQPCVQLSPEDKDKRRASGAAGRLGGGVARSFSSFTIANILQDPGGHVGGWVRSSLWNPFSAASAAATGPDARQSRADGSPCDARGVRMPAVADASGGAGRDVSGEGDGDCDDEVIILAADDGSGAPTAGHCNRPKSVYAHHSRLSVGSAWS* # PASA_UPDATE: g1274.t1, single gene model update, valid-1, status:[pasa:asmbl_3665,status:3], valid-1 NODE_2167_length_7438_cov_42.5036 . gene 118 2037 . - . ID=g1274;Name=g1274.t1 NODE_2167_length_7438_cov_42.5036 . mRNA 118 2037 . - . ID=g1274.t1;Parent=g1274;Name=g1274.t1 NODE_2167_length_7438_cov_42.5036 . five_prime_UTR 1968 2037 . - . ID=g1274.t1.utr5p1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 1910 2037 . - . ID=g1274.t1.exon1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 1910 1967 . - 0 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 1691 1760 . - . ID=g1274.t1.exon2;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 1691 1760 . - 2 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 1422 1491 . - . ID=g1274.t1.exon3;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 1422 1491 . - 1 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 1123 1230 . - . ID=g1274.t1.exon4;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 1123 1230 . - 0 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 629 779 . - . ID=g1274.t1.exon5;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 629 779 . - 0 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . exon 118 374 . - . ID=g1274.t1.exon6;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . CDS 325 374 . - 2 ID=cds.g1274.t1;Parent=g1274.t1 NODE_2167_length_7438_cov_42.5036 . three_prime_UTR 118 324 . - . ID=g1274.t1.utr3p1;Parent=g1274.t1 #PROT g1274.t1 g1274 MYAGSGGLPLSRILFNKYDADKSGSITAKELKQLCYDKGHFLTDSELSLAISTIDVSGNGTISYDEFQKWWQDSNRFAKLKLSEADEAQLQSAAAYFKYFDKDHSGSIDSKSEFPALYADLVKNGFALPALDKCIAALDGNGDGSVSFNEYVDWLVRIGSIKFSGSSS* # PASA_UPDATE: g1275.t1, single gene model update, valid-1, status:[pasa:asmbl_3664,status:3], valid-1 NODE_2167_length_7438_cov_42.5036 . gene 2294 5258 . + . ID=g1275;Name=g1275.t1 NODE_2167_length_7438_cov_42.5036 . mRNA 2294 5258 . + . ID=g1275.t1;Parent=g1275;Name=g1275.t1 NODE_2167_length_7438_cov_42.5036 . five_prime_UTR 2294 2493 . + . ID=g1275.t1.utr5p1;Parent=g1275.t1 NODE_2167_length_7438_cov_42.5036 . exon 2294 5258 . + . ID=g1275.t1.exon1;Parent=g1275.t1 NODE_2167_length_7438_cov_42.5036 . CDS 2494 4833 . + 0 ID=cds.g1275.t1;Parent=g1275.t1 NODE_2167_length_7438_cov_42.5036 . three_prime_UTR 4834 5258 . + . ID=g1275.t1.utr3p1;Parent=g1275.t1 #PROT g1275.t1 g1275 MRYGSAVVVFIVAAAAIAPAALPSTLAATLADYDDLQPYPPGQFGPRPGHHAARRRAVFGENNRTYETFPSSRVDPPSMPQVDYIVQPIFYSLRMGHVTYADNPLRMFSVYEPPGGCPVPLLSPSSLALPSVSVTSVSAASASHLASKSPSSTSQPLLATSAAEQHNTASATPLMPTSSSSPASSLHARSSSGVVVASASTVGLPASASASQQQPPLGTSPLSAKTTPSSALPSLQATTSLSVKESALVGMSTNGVRHEPGDSGRRERGAAASTPYSADTRSRPSITAREKHCIVAGNGGFFNTANGACYGNIVSDGRIVQTSPWHNANFGLRRDGTFVVGYIDEAMVNDITNPFVQLVAGVIWLVRNGTNFVSESADVEDLSHQETGRAFVTVRSARTAIGHDAHGRLVMAQIDGKTSVTGIALSDFADLLISKGVVNAVNLDGGGSGVVVLNGTVSNYPSDGPPLASQERPVTTVVCMHAPTCDPPCANNGTCAWGVCECASGYSGVTCEVPVDACDAVDSPCPPSFRCVVAGPGRKECVCDANYESVVVYTDLNGGHGAPHCKPVNVCAGNPGLCGDNAVCVFDGPAKHVCVCHAGYARNASVPDACVDVDECMQQHGGGGCSPHATCHNYPGGHLCVCGGDFSGNGTSCLPVSFVASLAGCHALIIGLAFTSILALAFGIIAAALGYDRLRLRRLGLVRNTPEAAAFLRKGGGGGISYDDDNEFSDGASDVIEMEGFRRGAGNALADKEGGTLSRTTSMSITSDSAFLLKNSGRR* # PASA_UPDATE: g1276.t1, single gene model update, valid-1, status:[pasa:asmbl_3666,status:12], valid-1 NODE_2167_length_7438_cov_42.5036 . gene 5758 7230 . - . ID=g1276;Name=g1276.t1 NODE_2167_length_7438_cov_42.5036 . mRNA 5758 7230 . - . ID=g1276.t1;Parent=g1276;Name=g1276.t1 NODE_2167_length_7438_cov_42.5036 . exon 6740 7230 . - . ID=g1276.t1.exon1;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . CDS 6740 7230 . - 0 ID=cds.g1276.t1;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . exon 6338 6479 . - . ID=g1276.t1.exon2;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . CDS 6338 6479 . - 1 ID=cds.g1276.t1;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . exon 5758 6053 . - . ID=g1276.t1.exon3;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . CDS 5943 6053 . - 0 ID=cds.g1276.t1;Parent=g1276.t1 NODE_2167_length_7438_cov_42.5036 . three_prime_UTR 5758 5942 . - . ID=g1276.t1.utr3p1;Parent=g1276.t1 #PROT g1276.t1 g1276 MYIIAALMILALFQKRHADLQSNPHSAYGLMAGVIFLNVIGVYYNNTAFWAIFSVIFLTASVILTAQIYYFGVWSFDRGIIHRVWVRMASPAQPQHKGRLGFLMFVNMVNLACMAYGISMQPGVSTFILALLIIDFMIYLVFYCAMKIYYSSETPGERIDLMPKVLSAITLAFWIPGLYFFTLEITNWELTPGGSRAHNRDCVFMDFYDGHDVWHFLSSCGLFFGAVVLLVLDDGLNETPRSKIAVF* # ORIGINAL: g5416.t1 original gene structure, not modified by PASA NODE_2952_length_4655_cov_41.5469 AUGUSTUS gene 2 4655 . + . ID=g5416;Name=g5416.t1 NODE_2952_length_4655_cov_41.5469 AUGUSTUS mRNA 2 4655 . + . ID=g5416.t1;Parent=g5416;Name=g5416.t1 NODE_2952_length_4655_cov_41.5469 AUGUSTUS exon 2 4655 . + . ID=g5416.t1.exon1;Parent=g5416.t1 NODE_2952_length_4655_cov_41.5469 AUGUSTUS CDS 2 4655 . + 1 ID=cds.g5416.t1;Parent=g5416.t1 #PROT g5416.t1 g5416 APAVPSSGAAAAPSSSLGGDVIEASATSAPPPGGVASSSKVEAEAVSSPAPAVPSSGAAAAPSSSLGGDVVEASATSAPAHDGVASSSALAASSSKVEAEAVSSAAPAVPSSGAAAAPSSSFGGDVIETSATSAPAPGGVASSSALAASSSKVEAEAVSSAAPAAPSSGAAAAPSSSFGGDVIEASATSAPAPGGVASSSALAASSSNVEAEVVSSAAPAAPSSGAAAAPSSSFSGDVVEASVTSFLESVSTQSSVLTVSPTPTWSVSDLPDAEVIDLIPKESSLPTVNQYSYLAFGVGLDSDPFEYGLRRTFFVVARGPTGLRLPNVDVNATVSFYLIVASGESAVAQQVSVSYSFIKNGGDAAVVGYAVPHPGIYGISVAVPNADVVGLVDGHEVSSPFVIRAFEPFAPKAVSAAVGAECSMVTIIFDQDSDMANVEGVVHCEQFILNWNVLGTAPFCSWSSPRLLHAQMDSMATVHNGTQLVFKGGQVRSVSGLSLPNPLTYVDVTLTPDLRGPVALLSVASRISVCESLTLDASPTTGKCGRPVSFLWEVEAVEDPAGALQIAQLLNSDPSKSIQTIGSIGMLKIGVGYSFKVTPVNAYGIVGTPAYGTSVRLPTVVPQILFDGVPTMTIPRTKTLTIRASARVPTCLTNMSSVVLSYKWSVSPAVSTNLWLGVKTTKPILTVPPLTLLPAMRYVFTVRVVGSGLDANFLNVIVFTETSPINVFIKGPLVRMIATVFPRRRARRDEGDEEDIVPDYDPNNPDAGVSELNPLMADASGSFDIDYPEMNLSFLWTCSIGGEKCPILSEPDFDVTNLVVRNSSLLNVPASSMAPMSEYYDFVVTARSLGDVSRVGAALVKIRILNDELIDPSITVNSPLHLVDGLYAADPNYPVRIEVSWNFRRYPLVMVDWTIGGPATDDVVRLVEDNYDLRFLTLDVSNLPTTTAYTINVALTPVDGRPARNASFTFALSGGPYGGNCTLTPTIVRVYGDVTIDCQGWVTSSGYPPKYRFIAPDGAIVRRLDFASSTTYTAANMTDSGLHEVQQAVVEIVDNIGTTVHVKIPYTVIPLSAQDAAVARVGIASSLEIFNTTSNWVGYFKSVSATNALALDVVQKNTAVTVFNLVWTAAPEYADEGVYGVLSCANVLVTWGLQMSFEESVNLLKDMNTTLVETAGVWLPPIRVSNALAVADYVTQVLSEAPLMRSAELSSGLGAYLDSVVIKSMEGSQCGELVSARSAHISLRTSSLCGGPNAPGAHILLNVSLSSEAIAILSGMSSDIIFGVVRLPNVFPDAIRLPYARHGRGHVVSDIVLVTIVNSVSHTVPNAMNSSDAALFRTNVSIPGGFADQDGLIYGCTMWASFGAWLPESCVILRVDAFNAECQCNSGGYVGIYAYYPRTSSDVEELPSVTTNSHQESVATSQSVLEMASSAWSAFSSAVLAGSDLPQPTPTATLFPEPMIPSDSVGTPTSSAHDAVVTPSQSDSWLNVASGWLSAVTAVFNGESSTALPEALSSSVPALSSAGSSVPEPQYSSAAGGAASSAAPAPVGVSS # PASA_UPDATE: g11581.t1, single gene model update, valid-1, status:[pasa:asmbl_8763,status:12], valid-1 NODE_666_length_19301_cov_43.1945 . gene 18654 19266 . + . ID=g11581;Name=g11581.t1 NODE_666_length_19301_cov_43.1945 . mRNA 18654 19266 . + . ID=g11581.t1;Parent=g11581;Name=g11581.t1 NODE_666_length_19301_cov_43.1945 . five_prime_UTR 18654 18718 . + . ID=g11581.t1.utr5p1;Parent=g11581.t1 NODE_666_length_19301_cov_43.1945 . exon 18654 18876 . + . ID=g11581.t1.exon1;Parent=g11581.t1 NODE_666_length_19301_cov_43.1945 . CDS 18719 18876 . + 0 ID=cds.g11581.t1;Parent=g11581.t1 NODE_666_length_19301_cov_43.1945 . exon 19128 19266 . + . ID=g11581.t1.exon2;Parent=g11581.t1 NODE_666_length_19301_cov_43.1945 . CDS 19128 19266 . + 1 ID=cds.g11581.t1;Parent=g11581.t1 #PROT g11581.t1 g11581 MDGIERAGGLASAVGDAPTHDAQGTQDAHEGPRARKLREVIAKAMDKTLEACSHAKVSQCFPDANEAQTRILKDGFVQLRKFLKESVDVSKRLMLSCV* # ORIGINAL: g11579.t1 original gene structure, not modified by PASA NODE_666_length_19301_cov_43.1945 AUGUSTUS gene 12253 14958 . - . ID=g11579;Name=g11579.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS mRNA 12253 14958 . - . ID=g11579.t1;Parent=g11579;Name=g11579.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 12253 14958 . - . ID=g11579.t1.exon1;Parent=g11579.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 12253 14958 . - 0 ID=cds.g11579.t1;Parent=g11579.t1 #PROT g11579.t1 g11579 MASPGAGDDGFTGVAAWLVTLGLNHRRARYEKCLAAAGLTTAPVLACTTDDTLRLCGVAVPAHRRLLLASAAEGFRRPATASTIAPELSNRNVHDWLNTLDLALCADALTSAGYETLADVVGATTDDLQAAGVALPGSRKKMAVSIQRNFAARPASILVLTPSDAPLYATASASLPVQGATLPVPQSRPPSQVQSRSRPSSIIAPAATVSTGTSATRDVRGYESRESSRRASAVDSSDSEDSENDLGMVDKGKGQRESGHDVFNSSGTWELVSNPLARSLGAGGNVGPQGRKRSSSDAFVGGGTHRFAVTKVVSQGFIRIPMTLVVDVECGTVTILKKHEGFQSAITNQTDKPYGIDSVRQLIKSRSEPARLGILFGGKARKDYRFDTPRSRERFCEMVERMRTVSGSSGAGSADAPVDDDAPTAASSLTVLVGTWNMGNADPPSDISAWVRPGGSGSPAADICAFGTQEETMGESEWAAMVLAACGDGYELLQAYSLWYMRLVVVVRSAHRDRVSHLQMDSVATGIGNALGNKGAVAISFHVDSSPICFVNCHLASGAENSARRNSDFAEIVRGLRVGRPQSLDITARFHHLFWCGDLNYRVDVSLDDALALVHQRDWVRLMAADQLSEERRCGRAFVGFVEREPTFPPTYRYARGTRLEYASKKVTRKGIRINVPSYCDRILSLSFPNLVAEQLALDCVDSIMTSDHSPVYALFSVGIARQFVAPASPDNAEGEDFPPAVILFGEAVCKVRAAVHAGSRFALEMHSPCLVDGMMRTKQNRLFVSPRPESAPSASGTAESLEFSPTVQSFQGCVRPAWTESDFSPMPTLFPHPAYVRAQHLQIAVLDEAGQVLGQCVVSLACVIGPRPVPFSALLTQSGTDVGYLRGTVRVHVPRSLKIS* # PASA_UPDATE: g11580.t1, single gene model update, valid-1, status:[pasa:asmbl_8760,status:12], valid-1 NODE_666_length_19301_cov_43.1945 . gene 15509 18318 . - . ID=g11580;Name=g11580.t1 NODE_666_length_19301_cov_43.1945 . mRNA 15509 18318 . - . ID=g11580.t1;Parent=g11580;Name=g11580.t1 NODE_666_length_19301_cov_43.1945 . five_prime_UTR 18176 18318 . - . ID=g11580.t1.utr5p1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 17966 18318 . - . ID=g11580.t1.exon1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 17966 18175 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 17655 17858 . - . ID=g11580.t1.exon2;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 17655 17858 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 17303 17557 . - . ID=g11580.t1.exon3;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 17303 17557 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 16831 17169 . - . ID=g11580.t1.exon4;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 16831 17169 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 15953 16714 . - . ID=g11580.t1.exon5;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 15953 16714 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . exon 15509 15852 . - . ID=g11580.t1.exon6;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . CDS 15571 15852 . - 0 ID=cds.g11580.t1;Parent=g11580.t1 NODE_666_length_19301_cov_43.1945 . three_prime_UTR 15509 15570 . - . ID=g11580.t1.utr3p1;Parent=g11580.t1 #PROT g11580.t1 g11580 MLHLCRQSCPLVRLSGNAFSRHFAASARCDSIGGQNIVEKIAQRFAEDIPAGHVVRAGDFVTVRPSYVMTHDNTSAVMNKFAALGGSRIANPRQLVFTLDHNVQDVGEKNIAKYASIAEFARKHGVDAYGAGRGIGHQVMVEEGYVVPGTLVVASDSHSNMYGGLGCLGTPVVRTDAASIWATGTTWWQVPPVARVTLTGRLRPGVTSKDVIITLCALFGKDEILNHALEFSGDGVASLSVDSRLTIANMTTEWGALAAVFPVDSVAIEWLRARARYLSARKHTPAPSATSRLSNEVISEMERSPVKADADAFYEAELTLDLDSVRPHVSGPNHVKVMRNVTEIEEAHVPIQKAYIVSCVNSRVDDLAEAASVVRGKKVHHSVKLYVAAASSEVEAASRARGDWDALLSAGAIPLPPGCGPCVGLGTGLLEDGETGISATNRNFKGRMGARTAQAYLASPAVVAASAVAGHICGTAKWDSAAPIGSFKTNPRPPLSPQPVSIVSGFPQKLSGPLLFCHQDGLNTDGIYAGAYTYREDVSPAMQAEVVMQNYDPNFVRIATAGDILVGGFNFGTGSSREQAATALLHKGIKVVIAGSFSETYKRNAFNNGLVVIEAPSLVRDITGRLGRALPTIKTGEMLSIDFSAGIVESGGRSYAFAPLGKTAQDLVVAGGLESWTKSRMRP* # ORIGINAL: g11574.t1 original gene structure, not modified by PASA NODE_666_length_19301_cov_43.1945 AUGUSTUS gene 891 3657 . + . ID=g11574;Name=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS mRNA 891 3657 . + . ID=g11574.t1;Parent=g11574;Name=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 891 1299 . + . ID=g11574.t1.exon1;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 891 1299 . + 0 ID=cds.g11574.t1;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 1576 1858 . + . ID=g11574.t1.exon2;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 1576 1858 . + 2 ID=cds.g11574.t1;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 2018 2087 . + . ID=g11574.t1.exon3;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 2018 2087 . + 1 ID=cds.g11574.t1;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 2209 3657 . + . ID=g11574.t1.exon4;Parent=g11574.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 2209 3657 . + 0 ID=cds.g11574.t1;Parent=g11574.t1 #PROT g11574.t1 g11574 MRIVTWNVNGLRPLTSRDVLFGDRRVCSSTAPTALALSAPRPASHSILLNSATDAAAGAGSGGKPAGATSAVHIAGSTTMQCVASPLKAVLDAFSADIVCFQETKLTRDQLTEVQAKVEGYDAFFSFNRRSSRGYSGVVTYCRQSTAVPLHAEEGVLGTLSGALGCSDAAPARDDADLDTEGRCIVTDHGAFVLLNVYCPCAGEDEDRWVFQMRFHAALERRCRALVSMGREVIVVGDVNLTHNEIDHCDPQKWSQLLTASVTTPHCFSPNPSLLRSQPLIDIHNWTPPSLALPQLKESGGSHFHDHPGRKWLNNFLVRKSAGMKPHSFAGCVTASATEIVPEVVTPSATEVVTPSAAELVTPSAAEVVTPSVAESAAERGSEGNGNAHTCRTARGGDRGNVCDSDGGGDSRACVGVVVDCFRALNPTLPGAFTCWRQDTGARACNYGTRIDYILATPRTAALVAACSIWPHVTGSDHCPVVGDLDIRASDTRRHPPAMCARFMPEFQGSTQGRLTAFLSRGGAKRLSSDAAPDGPGGERPLKRTKGQGPAQANLRSFFAAKAPVTATATTANTATPATPAARTAPNSTAEVAPPNARASAQGAIGRTVAASPSREKASKLHHRGTDAAPDDGVDVAVGTVRREARDQWRALLAAPPPPPVCAGHGEPCVERVVKKEGPNFGRRFFVCCRPQGLSTDPTARCDYFAWAEGGTAGWLRTSKSAGRAPAGVGKARAGT* # ORIGINAL: g11578.t1 original gene structure, not modified by PASA NODE_666_length_19301_cov_43.1945 AUGUSTUS gene 8849 11868 . + . ID=g11578;Name=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS mRNA 8849 11868 . + . ID=g11578.t1;Parent=g11578;Name=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 8849 8953 . + . ID=g11578.t1.exon1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 8849 8953 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 9121 9163 . + . ID=g11578.t1.exon2;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 9121 9163 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 9323 9402 . + . ID=g11578.t1.exon3;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 9323 9402 . + 2 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 9551 9808 . + . ID=g11578.t1.exon4;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 9551 9808 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 9955 10020 . + . ID=g11578.t1.exon5;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 9955 10020 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 10179 10235 . + . ID=g11578.t1.exon6;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 10179 10235 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 10361 10418 . + . ID=g11578.t1.exon7;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 10361 10418 . + 0 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 11218 11611 . + . ID=g11578.t1.exon8;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 11218 11611 . + 2 ID=cds.g11578.t1;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS exon 11841 11868 . + . ID=g11578.t1.exon9;Parent=g11578.t1 NODE_666_length_19301_cov_43.1945 AUGUSTUS CDS 11841 11868 . + 1 ID=cds.g11578.t1;Parent=g11578.t1 #PROT g11578.t1 g11578 MLIDTLPAEVALQIFALLDEQRLDGVLGLPWSRAVVSSRVHFLADDDSLWAPRCRSQQLWGLDDVLCPPEGLSWKSGVTFHVVDLLHWLPRLWLQLYMQRRRLARNWRRGSYSVHTLLGHTESVVCIQLRGTLLVSGSYDGTIRMFDVDTGKCIQLFSGHSEGVRCIQFDESILVSGSIDATIKVWNVRDGTCLATLRGHNSVVRCLSYYGDVLASGSVDKVGHSGWVMALELQRAHRRLISGSVDGSIIVWSTVTFSCIGRLGGSFVLRCLRAVGDRIVYGCDSSVAIESLHSATALHSMQPHAQPPGVAEHPGQAEGDPGGPEPQLLVGHHLEYVTALDTNDGLIASASTDRTIKIWDFR* # PASA_UPDATE: g11576.t1, single gene model update, valid-1, status:[pasa:asmbl_8761,status:12],[pasa:asmbl_8762,status:12], valid-1 NODE_666_length_19301_cov_43.1945 . gene 5113 6831 . + . ID=g11576;Name=g11576.t1 NODE_666_length_19301_cov_43.1945 . mRNA 5113 6831 . + . ID=g11576.t1;Parent=g11576;Name=g11576.t1 NODE_666_length_19301_cov_43.1945 . five_prime_UTR 5113 5193 . + . ID=g11576.t1.utr5p1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 5113 5213 . + . ID=g11576.t1.exon1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 5194 5213 . + 0 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 5553 5593 . + . ID=g11576.t1.exon2;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 5553 5593 . + 1 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 5859 5887 . + . ID=g11576.t1.exon3;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 5859 5887 . + 2 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 6103 6301 . + . ID=g11576.t1.exon4;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 6103 6301 . + 0 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 6416 6466 . + . ID=g11576.t1.exon5;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 6416 6466 . + 2 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . exon 6655 6831 . + . ID=g11576.t1.exon6;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . CDS 6655 6779 . + 2 ID=cds.g11576.t1;Parent=g11576.t1 NODE_666_length_19301_cov_43.1945 . three_prime_UTR 6780 6831 . + . ID=g11576.t1.utr3p1;Parent=g11576.t1 #PROT g11576.t1 g11576 MSTPDASRRSSSGSGRRGGAGRGGSSAQPQTHPSSRGEAAPSVQSAQGAQAQSQAQPQPQPQAQAQSQAQPQAQSQPQAQPDSGFNVAEAEAMLNRAWLVGLNLLNNPSVSESERPEVYRDKAWIVKPSVGGITGDFLSAVSQKMDAAWEHREP* # PASA_UPDATE: g11577.t1, single gene model update, valid-1, status:[pasa:asmbl_8759,status:3], valid-1 NODE_666_length_19301_cov_43.1945 . gene 6974 8381 . - . ID=g11577;Name=g11577.t1 NODE_666_length_19301_cov_43.1945 . mRNA 6974 8381 . - . ID=g11577.t1;Parent=g11577;Name=g11577.t1 NODE_666_length_19301_cov_43.1945 . five_prime_UTR 8151 8381 . - . ID=g11577.t1.utr5p1;Parent=g11577.t1 NODE_666_length_19301_cov_43.1945 . exon 7583 8381 . - . ID=g11577.t1.exon1;Parent=g11577.t1 NODE_666_length_19301_cov_43.1945 . CDS 7583 8150 . - 0 ID=cds.g11577.t1;Parent=g11577.t1 NODE_666_length_19301_cov_43.1945 . exon 6974 7366 . - . ID=g11577.t1.exon2;Parent=g11577.t1 NODE_666_length_19301_cov_43.1945 . CDS 7017 7366 . - 2 ID=cds.g11577.t1;Parent=g11577.t1 NODE_666_length_19301_cov_43.1945 . three_prime_UTR 6974 7016 . - . ID=g11577.t1.utr3p1;Parent=g11577.t1 #PROT g11577.t1 g11577 MASSARLLVVGGSGFIGAAVCREAVLRGFGRVVALSRHGQRPSADAWCDGVEWVRGDALDPTSYRDHVEGATCVVHAVGTLLENTFYKALVKPDRLAKGGFGVLGAGSASHVATGGGIGERTTYERMNRDSAVEVARAAVAAASVRSFVFLSAAAPKALASFLRYVSTKREAEEAISGMGSLRTVILRPGLVYSDDDPVTAPLALAGRVAGAIAGPVFRALPRSLVDWNDLYIPPVNVRTLARAAVSGALDASASGIFCGDDIERLADAIVRVQETAPAAVTSPPPSAQSMGSGGPCDLRQIPIV* # PASA_UPDATE: g11575.t1, single gene model update, valid-1, status:[pasa:asmbl_8758,status:12], valid-1 NODE_666_length_19301_cov_43.1945 . gene 3724 4674 . - . ID=g11575;Name=g11575.t1 NODE_666_length_19301_cov_43.1945 . mRNA 3724 4674 . - . ID=g11575.t1;Parent=g11575;Name=g11575.t1 NODE_666_length_19301_cov_43.1945 . five_prime_UTR 4556 4674 . - . ID=g11575.t1.utr5p1;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . exon 4471 4674 . - . ID=g11575.t1.exon1;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . CDS 4471 4555 . - 0 ID=cds.g11575.t1;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . exon 4182 4280 . - . ID=g11575.t1.exon2;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . CDS 4182 4280 . - 2 ID=cds.g11575.t1;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . exon 3724 3921 . - . ID=g11575.t1.exon3;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . CDS 3866 3921 . - 2 ID=cds.g11575.t1;Parent=g11575.t1 NODE_666_length_19301_cov_43.1945 . three_prime_UTR 3724 3865 . - . ID=g11575.t1.utr3p1;Parent=g11575.t1 #PROT g11575.t1 g11575 MALWPLIKAMLLLVNAVAILNEKRFLSRIGWGSDTQAYGYDQASVKTRMVNLIYAVHSLLRIPLIGINALTILFELVFG* # PASA_UPDATE: g10490.t1, single gene model update, valid-1, status:[pasa:asmbl_5789,status:12], valid-1 NODE_3258_length_3897_cov_34.4082 . gene 1254 3645 . - . ID=g10490;Name=g10490.t1 NODE_3258_length_3897_cov_34.4082 . mRNA 1254 3645 . - . ID=g10490.t1;Parent=g10490;Name=g10490.t1 NODE_3258_length_3897_cov_34.4082 . five_prime_UTR 3620 3645 . - . ID=g10490.t1.utr5p1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 3458 3645 . - . ID=g10490.t1.exon1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 3458 3619 . - 0 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 3256 3315 . - . ID=g10490.t1.exon2;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 3256 3315 . - 0 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 2868 3047 . - . ID=g10490.t1.exon3;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 2868 3047 . - 0 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 2298 2728 . - . ID=g10490.t1.exon4;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 2298 2728 . - 0 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 2024 2139 . - . ID=g10490.t1.exon5;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 2024 2139 . - 1 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 1686 1852 . - . ID=g10490.t1.exon6;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 1686 1852 . - 2 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . exon 1254 1520 . - . ID=g10490.t1.exon7;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . CDS 1485 1520 . - 0 ID=cds.g10490.t1;Parent=g10490.t1 NODE_3258_length_3897_cov_34.4082 . three_prime_UTR 1254 1484 . - . ID=g10490.t1.utr3p1;Parent=g10490.t1 #PROT g10490.t1 g10490 MAGVEHAAAMGHLAENDAIQASTMACAEKLPNVTIAYDAPVATVAVPTLIGEGEFNDSWAEVTVAGRKIQTRLLIGADGPNSLVRRSTHIDTVGWDYDQTAVVATLSVQLRANARENSTTWQRFLPTGPIALLPLSPSVCSLVWSTSRTAAKDLLALTDAQFADEVNRAFCGHSDGVFGVATQGQSLSADRGIVASVAHNLAEVAGSSLFQAVARRAASLVPGLAVTRASGVAGAGLERPTECGQPHVVTCTAKSRASFPLSFSHAKHYVQHRMALIGDAAHRVHPLAGQGVNLGFGDAREIAACIVQSAADGQDIGGLHRLVAYETARQRANIPVMAATDTIKRLFSTAFPPAVLARSLGFSLTNIANPIKRKIVQHAMLGE* # PASA_UPDATE: g10489.t1, single gene model update, valid-1, status:[pasa:asmbl_5790,status:12], valid-1 NODE_3258_length_3897_cov_34.4082 . gene 99 1564 . + . ID=g10489;Name=g10489.t1 NODE_3258_length_3897_cov_34.4082 . mRNA 99 1564 . + . ID=g10489.t1;Parent=g10489;Name=g10489.t1 NODE_3258_length_3897_cov_34.4082 . exon 99 343 . + . ID=g10489.t1.exon1;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . CDS 99 343 . + 0 ID=cds.g10489.t1;Parent=g10489.t1;5_prime_partial=true NODE_3258_length_3897_cov_34.4082 . exon 550 784 . + . ID=g10489.t1.exon2;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . CDS 550 784 . + 1 ID=cds.g10489.t1;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . exon 1019 1132 . + . ID=g10489.t1.exon3;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . CDS 1019 1132 . + 0 ID=cds.g10489.t1;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . exon 1276 1564 . + . ID=g10489.t1.exon4;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . CDS 1276 1290 . + 0 ID=cds.g10489.t1;Parent=g10489.t1 NODE_3258_length_3897_cov_34.4082 . three_prime_UTR 1291 1564 . + . ID=g10489.t1.utr3p1;Parent=g10489.t1 #PROT g10489.t1 g10489 LQTIGCKPIASVDHFHPEKLGSAELVEEVTAGEAKIVKVTGVPPGARTVSIVVRGSNKLVLEEAHRSIHDALCVIRCLVKKRALIAGGGAPEIQVAVELGQFAQTLGGMEAYCVRAFAEALEVVPYTLAENAGLNPIGVVTELRNKHAQGEKTAGINVRKGAITNILEENVIQPLLVCTSAITLAAETVRSILKIDDIVGAR* # ORIGINAL: g12278.t1 original gene structure, not modified by PASA NODE_2892_length_4826_cov_38.0419 AUGUSTUS gene 2400 3482 . + . ID=g12278;Name=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS mRNA 2400 3482 . + . ID=g12278.t1;Parent=g12278;Name=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS exon 2400 2578 . + . ID=g12278.t1.exon1;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS CDS 2400 2578 . + 0 ID=cds.g12278.t1;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS exon 2809 2880 . + . ID=g12278.t1.exon2;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS CDS 2809 2880 . + 1 ID=cds.g12278.t1;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS exon 3184 3255 . + . ID=g12278.t1.exon3;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS CDS 3184 3255 . + 1 ID=cds.g12278.t1;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS exon 3458 3482 . + . ID=g12278.t1.exon4;Parent=g12278.t1 NODE_2892_length_4826_cov_38.0419 AUGUSTUS CDS 3458 3482 . + 1 ID=cds.g12278.t1;Parent=g12278.t1 #PROT g12278.t1 g12278 MAVRTRGISRAMRIQIVIALCMSILCADCVLGVTCPAGCECDVGAVLSCSYATPAFLTSMNWANMGLTSIAAGVLDQLTAVKILDLSANELTSLPPGLFSKLPALMILDDEPVYL* # PASA_UPDATE: g12277.t1, single gene model update, valid-1, status:[pasa:asmbl_5194,status:12], valid-1 NODE_2892_length_4826_cov_38.0419 . gene 516 1779 . + . ID=g12277;Name=g12277.t1 NODE_2892_length_4826_cov_38.0419 . mRNA 516 1779 . + . ID=g12277.t1;Parent=g12277;Name=g12277.t1 NODE_2892_length_4826_cov_38.0419 . exon 516 693 . + . ID=g12277.t1.exon1;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . CDS 516 693 . + 0 ID=cds.g12277.t1;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . exon 904 1062 . + . ID=g12277.t1.exon2;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . CDS 904 1062 . + 2 ID=cds.g12277.t1;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . exon 1397 1779 . + . ID=g12277.t1.exon3;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . CDS 1397 1569 . + 2 ID=cds.g12277.t1;Parent=g12277.t1 NODE_2892_length_4826_cov_38.0419 . three_prime_UTR 1570 1779 . + . ID=g12277.t1.utr3p1;Parent=g12277.t1 #PROT g12277.t1 g12277 MALGTLFPLVSKVWTVATTNGRAPSPRFGHVIAAVGTRLFVHGGMNGAEIFGDLHILDTETLTWSSPTSKGNAPRRTGHACVVIGSKVYVQGGLHFGGDGPSPRDDLFALDTETLSWEASIVDTEKPSARLDHVMCRVSKADGTADVILFGGMDDTAEFYGDCHVLTED* # ORIGINAL: g744.t1 original gene structure, not modified by PASA NODE_861_length_16583_cov_43.8048 AUGUSTUS gene 2206 4227 . - . ID=g744;Name=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS mRNA 2206 4227 . - . ID=g744.t1;Parent=g744;Name=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS exon 3926 4227 . - . ID=g744.t1.exon1;Parent=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS CDS 3926 4227 . - 0 ID=cds.g744.t1;Parent=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS exon 2937 3626 . - . ID=g744.t1.exon2;Parent=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS CDS 2937 3626 . - 1 ID=cds.g744.t1;Parent=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS exon 2206 2650 . - . ID=g744.t1.exon3;Parent=g744.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS CDS 2206 2650 . - 1 ID=cds.g744.t1;Parent=g744.t1 #PROT g744.t1 g744 MEHIVPGPVPHGTSYTALQRSHTVPCDRQRTRDVIICVTDSPTYCDAVLSTMLSFIPPGGAVGFDTETRPVFEKNAPRRPPSVIQIATADYCLVYQTRKITNGDSVSLPTSIVNLFANRSITKAATGVVNDLRNLRSAWTSNLVLESFMEVDQENVRAGLRPRGIKQLMKDCFNADMSKPKAITLSNWGAETLTPEQIQYAAADAWLSLQAYRSVRSTAASHAPVVGSAHAAIAEQGNPREADDDNASRNSRQGRAQNGNGRRTNSNSGRSTPTHRGQPRGRLTVDNVESLVSRIEGDPEAGRDLLLEEIKSPLQWFYFGCQANHIHWWRRVPVRKPVSRCKKCHCKFDPIPKDEWIGHGIFNCPCGKVWTNGASRAITEQPCYGCGKTSLPVRIVPSPRKSERKTQNRHKCAECRGDGSCPVREAARRVDSGPWSSEHASTGSTEASATFEQTLFGVPIADDQMLQNMFGNLLRISE* # PASA_UPDATE: g743.t1, single gene model update, valid-1, status:[pasa:asmbl_9721,status:12],[pasa:asmbl_9723,status:12], valid-1 NODE_861_length_16583_cov_43.8048 . gene 439 1531 . + . ID=g743;Name=g743.t1 NODE_861_length_16583_cov_43.8048 . mRNA 439 1531 . + . ID=g743.t1;Parent=g743;Name=g743.t1 NODE_861_length_16583_cov_43.8048 . exon 439 519 . + . ID=g743.t1.exon1;Parent=g743.t1 NODE_861_length_16583_cov_43.8048 . CDS 439 519 . + 0 ID=cds.g743.t1;Parent=g743.t1;5_prime_partial=true NODE_861_length_16583_cov_43.8048 . exon 905 988 . + . ID=g743.t1.exon2;Parent=g743.t1 NODE_861_length_16583_cov_43.8048 . CDS 905 988 . + 0 ID=cds.g743.t1;Parent=g743.t1 NODE_861_length_16583_cov_43.8048 . exon 1227 1531 . + . ID=g743.t1.exon3;Parent=g743.t1 NODE_861_length_16583_cov_43.8048 . CDS 1227 1331 . + 0 ID=cds.g743.t1;Parent=g743.t1 NODE_861_length_16583_cov_43.8048 . three_prime_UTR 1332 1531 . + . ID=g743.t1.utr3p1;Parent=g743.t1 #PROT g743.t1 g743 ATSAGAIFMLTSSEPLQHYVDKIKEMKLPAVVPFAAKFLIAWPIAFHTANGIRHLNWDLARGLQIPQVYRSGYVVLAVSAIAGLILAAQ* # PASA_UPDATE: g745.t1, single gene model update, valid-1, status:[pasa:asmbl_9720,status:3], valid-1 NODE_861_length_16583_cov_43.8048 . gene 5982 8713 . - . ID=g745;Name=g745.t1 NODE_861_length_16583_cov_43.8048 . mRNA 5982 8713 . - . ID=g745.t1;Parent=g745;Name=g745.t1 NODE_861_length_16583_cov_43.8048 . five_prime_UTR 8522 8713 . - . ID=g745.t1.utr5p1;Parent=g745.t1 NODE_861_length_16583_cov_43.8048 . exon 7517 8713 . - . ID=g745.t1.exon1;Parent=g745.t1 NODE_861_length_16583_cov_43.8048 . CDS 7517 8521 . - 0 ID=cds.g745.t1;Parent=g745.t1 NODE_861_length_16583_cov_43.8048 . exon 5982 7014 . - . ID=g745.t1.exon2;Parent=g745.t1 NODE_861_length_16583_cov_43.8048 . CDS 6241 7014 . - 0 ID=cds.g745.t1;Parent=g745.t1 NODE_861_length_16583_cov_43.8048 . three_prime_UTR 5982 6240 . - . ID=g745.t1.utr3p1;Parent=g745.t1 #PROT g745.t1 g745 MTRHAEEANIAHTATVRDGIGDGKANPDDAPACTMTAAYAFDASLPSATRLVASSGSAGNGVAVALKLANDDDEVDAHAHYPYADSTTRPVGRHTLPILSTFVFLVWDLLRCVVPKWMPVAVSSVAVALAANVAIRAVSDRTDWVLSRCAIASTEYVFFLVVISIMVAVSTSRKDAKIPPVFMQTFTVGAVIAAGLLSAVLYVTGFLRDTSCSAWKLIWVCVVPPIVLYAVGNLPLLWMRELLPPYLRTSRAFVVVIAIAALATAQAIAFVVHSVMTFVWFYVFSGVVDGHRRQSKKLEFVYGSVAYPVLSQVLVSALLALTKSGNVEPAFHAIQIRVFVFAIKLPERSLQYCAENPFAGLVISTLVSAVVKDTMPILFRWAKATGLPRLQRMRLRLCPARRNHLSDAVRSQTDFINTEHNPLHMTSVESAERSNVSNITVQLSPCSADVGPDMAVGAEGRFGTSDSDDLSSRHPLPVTPHNREHWLGLRKLNELIGRHTANVCGVAISIAVCDAQPGRAVGLGVFGVALMVLADAASLFIAFAASSWYLTRAVDMRARVQKVGNIRASVVILLQTWCATGVILAAESFCDG* # PASA_UPDATE: g747.t1, single gene model update, valid-1, status:[pasa:asmbl_9722,status:12], valid-1 NODE_861_length_16583_cov_43.8048 . gene 15758 16440 . - . ID=g747;Name=g747.t1 NODE_861_length_16583_cov_43.8048 . mRNA 15758 16440 . - . ID=g747.t1;Parent=g747;Name=g747.t1 NODE_861_length_16583_cov_43.8048 . five_prime_UTR 16392 16440 . - . ID=g747.t1.utr5p1;Parent=g747.t1 NODE_861_length_16583_cov_43.8048 . exon 15758 16440 . - . ID=g747.t1.exon1;Parent=g747.t1 NODE_861_length_16583_cov_43.8048 . CDS 15960 16391 . - 0 ID=cds.g747.t1;Parent=g747.t1 NODE_861_length_16583_cov_43.8048 . three_prime_UTR 15758 15959 . - . ID=g747.t1.utr3p1;Parent=g747.t1 #PROT g747.t1 g747 MEKQSSGTNPSSETVGDKKSHRKKSRRAALNRILTLLIISTVAEVLAIALQVYEATQALSDKYNTTTNPPDAPGAGSIGISFIFDLLQFTCCFLSLKFFSNVQPSDSRQSQMSSSYATTTAAQSSAKAPASAIELGQIETNIE* # ORIGINAL: g746.t1 original gene structure, not modified by PASA NODE_861_length_16583_cov_43.8048 AUGUSTUS gene 10198 15030 . + . ID=g746;Name=g746.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS mRNA 10198 15030 . + . ID=g746.t1;Parent=g746;Name=g746.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS exon 10198 15030 . + . ID=g746.t1.exon1;Parent=g746.t1 NODE_861_length_16583_cov_43.8048 AUGUSTUS CDS 10198 15030 . + 0 ID=cds.g746.t1;Parent=g746.t1 #PROT g746.t1 g746 MISASARVGDVDSVEKLLSDMTAHGIVLTHLDAVRLGETYYAAGRGREGADAVRALLKTHAIAPTTGVINCILENQLSAGEFASVVGSYRQLDILGIAPDAGTRSIGCRALVGIGDYAAAIAEAQTIDSVAVRASVFATISEMASDCKDIERARHTADLAITNMQNSAGARGISSSCKLQPLAMLPDEGVFTSAVNGLLRAQQRVLKLCAETMKEASGESAAGHVCENSAYFARLDIPYIASREGHLLDAQSYRLLLDSCGDAAVVQSHLTGMDLSLSVRADAWRRVADAHPVVIKYRRMRAIFDEMKRDAIVADSEDYIAFLSAAIDASLIESALCACATSALPNKRPLDAAKEIIVEMNANLHARVGPNDRMFAFLMRACSPAAIAVPWATMRVHDMPNVVPRTLSGRFVGSSSYASQFVPVASAGVPIASIAVLREYDARMDEVNRDMRVSSVPYGPLSAHAYLSILAHAHSFGHMVHSYKWLLSLAVPLLPETYEVMICTLSSTSNNNMCHERALSIWLEHVAPTPAADAESARDDSSASLSANQPTDATMLSVLSSACELGRLDDGARVLRRFLRNASLPEAIGIYARGHIRVGDIGGAERAVRQIERLGLSAAPESVAATLEIALYVPPKPVKDMEGAIDDAAAVLSNSVAIVEDESDRARDSESAVGIVRLGLADAWRFGRAGAVRASGVAVSSLLSRGLLAEAANVIISDGIVVDPPALRHLVTELIAAGNVSMAETAVVAAAGNARTKGMPFSFEEAVSPLVVRLLAEKGAAAALDLAKRASGTSASEFVAIMRYLASAAEGAATPSQTTTTRPAISFADEDVSESNVVALSPSLVSAVLEDANPECMADVPLCDVLLAASFNGQPPMAARALSHRKMSSAHCVVPPVAIDHGRLLSDGYSQPSAVASPSHPLSEHALKRLFGMAGISAFEKGAVKKRVNTNERSIPPIPVALNGNVARVLADALSSTSFASEESASRYYAGFVHKCLGIGLVWTGRVQNLIERDQATAGVEAVPYVVTHSDTTKELVDEALYVLGDMARRGVSPSVPSLYFITANRLVVLGEHRHACDAILAMKAGADATPARVLAGSRQLYGTRQWQEAVEVEQRRMRWIDRRASRALSAVIGERARAVIGTSSAAEMRECVEMVAKGLDGGLSLFPGDFAAVVAAVSGGIRASNAAENMASAISGIVASLVAPIDRGLVQRDAAKWIYAPLVRGCCQVGVADEGGELATVGENSDAQFGRAMAVSLAGALDSRDVRIPASVLSDVIDASIALGDLTAAVAIATVGVERHALGSVAAVGRLMQALAEHQMVSEANELVRVLSSHHKTHASLMLLRSAASDSALVQQWGSFRQRCGEDPNDAAKQYLDGKVATLPRFVQEIAYWDVWRGLVSRGYFVKAASWAAHSNAPSRWRPNKRQWDNALSRAAKAKDVVGVSSLLNAAVHTFGAPRDGGGDVDADEPAHGSSASSSQVKPTVAYVPSSLVAAELVKVLASKGLSSESLHLAMQCRMRGNDPGATAWAAVAAAVTSTLGAATTTTADKNAVSAKDATGSAKKGARLRELAAGAQEALLALDDSYAHKDWYRLLWTAVRSVADRQKAV* # PASA_UPDATE: g6120.t1, single gene model update, valid-1, status:[pasa:asmbl_7673,status:12], valid-1 NODE_4852_length_1196_cov_50.5522 . gene 175 1086 . - . ID=g6120;Name=g6120.t1 NODE_4852_length_1196_cov_50.5522 . mRNA 175 1086 . - . ID=g6120.t1;Parent=g6120;Name=g6120.t1 NODE_4852_length_1196_cov_50.5522 . five_prime_UTR 1047 1086 . - . ID=g6120.t1.utr5p1;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . exon 969 1086 . - . ID=g6120.t1.exon1;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . CDS 969 1046 . - 0 ID=cds.g6120.t1;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . exon 576 702 . - . ID=g6120.t1.exon2;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . CDS 576 702 . - 0 ID=cds.g6120.t1;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . exon 175 264 . - . ID=g6120.t1.exon3;Parent=g6120.t1 NODE_4852_length_1196_cov_50.5522 . CDS 175 264 . - 2 ID=cds.g6120.t1;Parent=g6120.t1;3_prime_partial=true #PROT g6120.t1 g6120 MNALQESCNKWAPGVKVQAVRVTKPKIPESIRRNYELMEAEKTKLMIAEQHQKVIEKEAETERKRAIIEAEKHSAVARIQNEMKVNEKESQKRMALIE # PASA_UPDATE: g8246.t1, single gene model update, valid-1, status:[pasa:asmbl_585,status:12], valid-1 NODE_1154_length_13484_cov_40.0434 . gene 12430 13347 . - . ID=g8246;Name=g8246.t1 NODE_1154_length_13484_cov_40.0434 . mRNA 12430 13347 . - . ID=g8246.t1;Parent=g8246;Name=g8246.t1 NODE_1154_length_13484_cov_40.0434 . exon 13126 13347 . - . ID=g8246.t1.exon1;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . CDS 13126 13347 . - 0 ID=cds.g8246.t1;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . exon 12762 12889 . - . ID=g8246.t1.exon2;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . CDS 12762 12889 . - 0 ID=cds.g8246.t1;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . exon 12430 12651 . - . ID=g8246.t1.exon3;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . CDS 12465 12651 . - 1 ID=cds.g8246.t1;Parent=g8246.t1 NODE_1154_length_13484_cov_40.0434 . three_prime_UTR 12430 12464 . - . ID=g8246.t1.utr3p1;Parent=g8246.t1 #PROT g8246.t1 g8246 MCVFEAVGSTHALAANSHVEFSSSQTNPHIAPFVQNADNSMWPLERFEVYLTNAIRHKVTTLCQMGLMPTLFGQDVSGIFLQTYTSTTRSDITIVPALSLYDHFKIISHPTVEDMRRYIHKGAAAAYPRIPLVRHRLINEQRLAAALRASQARAEELSRDPRKHLSVPQSRLNRLNSV* # PASA_UPDATE: g8245.t1, single gene model update, valid-1, status:[pasa:asmbl_582,status:12],[pasa:asmbl_583,status:12],[pasa:asmbl_584,status:12], valid-1 NODE_1154_length_13484_cov_40.0434 . gene 186 12319 . + . ID=g8245;Name=g8245.t1 NODE_1154_length_13484_cov_40.0434 . mRNA 186 12319 . + . ID=g8245.t1;Parent=g8245;Name=g8245.t1 NODE_1154_length_13484_cov_40.0434 . exon 186 321 . + . ID=g8245.t1.exon1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 186 321 . + 0 ID=cds.g8245.t1;Parent=g8245.t1;5_prime_partial=true NODE_1154_length_13484_cov_40.0434 . exon 528 707 . + . ID=g8245.t1.exon2;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 528 707 . + 2 ID=cds.g8245.t1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . exon 850 971 . + . ID=g8245.t1.exon3;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 850 971 . + 2 ID=cds.g8245.t1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . exon 1198 1656 . + . ID=g8245.t1.exon4;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 1198 1656 . + 0 ID=cds.g8245.t1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . exon 1808 11808 . + . ID=g8245.t1.exon5;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 1808 11808 . + 0 ID=cds.g8245.t1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . exon 12005 12319 . + . ID=g8245.t1.exon6;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . CDS 12005 12107 . + 1 ID=cds.g8245.t1;Parent=g8245.t1 NODE_1154_length_13484_cov_40.0434 . three_prime_UTR 12108 12319 . + . ID=g8245.t1.utr3p1;Parent=g8245.t1 #PROT g8245.t1 g8245 YEVEQFEAQLAGVKSGNGDDIGGGAGDGAAVDTGKGKESEVASTPVALDVRKGLLLRALISFFGQALRMASLADRVRGLMEGALPVALKHIVQRPEQYGSPLFAAAVSLIANYVHHEPTVLPHLQECGVTSALLDSLINRLPASSEVLCALPHVLSALCLNVAGLESFSSARPFDGLFKIFLSPEYRHALHGSTAVKLGSAMDELLRHQPSLRNEGIEAVVNLVVRLRDLGKKETPPAANAGAGCALLAPLAGERDDRMDIGEAVDAVVDVDVVDDNSVPSTEEKQGAPLLDYVGNVAKFLGHLLQSEEHSKLFCKLKGTEPLCDILCLQSLPMTFHVSTASSHLAQVFLVLVTSGSDDVLPFLSERLSLLIKSTEADLEAVAGASHAVAKEINGRILHTMSLIRVVIGFFTSMSREHGHARGLTVVSAHWATEAGKSLLVAIGTFHRKLLAHVAKYKAKELVTAVVASSAIVAVVDGQTVTTDTPMPPAAGGCADNSVGAAPPLGAAVVQEEARADSVSKKTPEDSVTLVMRMTVHLSTSIFSMLTATLRLTTSRRRNRPVGANTGEVMAAILHDHYDPAKGALIPGRSLVAGEESKLLASLGYTASVTGEMFQFLFDDRGKTAYTSLIAGIESNGGLAKFFSILGDIVLLVQEAGVARTKGQNLAHVIDHAANRTLAGMLSVVEKLANSALVAGSDVQVRGGPFFGMQDMDHGGKNGEGTATAKAVQKRALDALVPLWASPSVVGSFSKTSVEHLLLSMAYILKTVSAPSSASAGEASGGSGGSQAASGLTGANPRVADFQDTAANIARLQLEGSDYSEEDLLQALALSLGELPAVPALAVAPTKGKEKVKERDKGKDTDSAEAAAVESMVASLVPVCMAILDAHEGSAARVSELLSLGCRRDNGSRAALVFSQLIACSSEPFNDLASELRSGCAGSDVMHAKSAARVFSRAHLLALALGDEKQAMATALRDSGLYTVVFGLIEAAAACLSIKDAPAAPVVESGQSAPVDWLAPVLLLVDAHERIAAVPIATTVQTAQPTVGGKAREGDRPKPRDSARDPVRDKEKAKANGKEADSGKGDSADGPEYIPGFTQVERAHVLRLCVSLLRSNILLPDSTSAALQLCVRYTRDPVLAREFVSVGGVGVVLSIAQGSGFRGMASLAIMALRHVVEDAETLNVIATLGVKDFIRRHMAQTARPVDLRTALKSLSGLVYRSEGATAEALIKYSAAVAVAPGTVASKATNVNLVYREGDAWKKGAAGKKSAGDSSVSASEAGGAVMDAAASVAGEAPSGNDAGPQSESAGDAPAAPTPQPTDLMRLVMAALLDAFVTSGNGESAPPSGLAVDKDGVAPMDADPPAVTLAHTATPTPHVQGQKQATEATVRPYFMRSAVLAFIAELLTSYPTAAEAFAEKMSAERSAGASTSILRAIFDDFFEARDKTESKTASTRGMRMGEEMFRSAATAHHITIIMALAHADATRESVTAELRELVRQTALLRDAAVRHSRVSAIGYLIPTLCAPDQSKKQWPLRSPDSETDALKKIVSSLVARKMLPALADLLKMVDLSHGDATADQTKAVLAAIDALAYHASEYGIGAIAKQRTMSTSSAISGGVESDPGEEFEPDVPAEASAARVTAAVTPPGAGEGRGALGRQVSNRSARSHRVEIVRQPSVGSHVRPRPEAIQAALDAVSQPSSAASGGASAAAPAADAMDEEDEAVGDAADEDAVAARVDHSHDIEDGFDASGAHRRAARARGHGISHQGSLRRRASVISNQSTESEGSDGEMYWEDEDAREVHARGGASNLLSDSSSNSDDEGESDPDDDVDEGDAHDHHHHHHHHHHHHHLHNDDDVSTDEEDDAEGEDVEGEEDNVDDDAEDNGDDAEDGADDEDGDGNEEDDEDDDDDMMDDYEGDGIDAVFDELGAEGAVHNNNGRRIGGMAGMGGVGARRMVMPPLQHDGFMDIDEEELGFELFHEDTFAEDLEHMFGYGNAPGTAAERRYVLFPGGRPDAGYFMQGPRGGGLAFDNAVPRNLMQMLNAGPAGDRGGSGARDVVDRRPPNVPSRTNPALIGAHHLVVRGPGIGDGAQPPPTFAYIHASSTYGIPADSPGVLPALVSHPVQILEAFYAVSQFPTAAPVQLVPVGTGAVAIAPPSSGSAAGATEAVSGAGAAQGQSAQSVASYVAHAPGVGAQRSRDEMRSLLPPTARERMDALIDYVRDRNLFGRNAQIGPLGVSSGNGGATQHVATVSTPDRWVEESRVLLAEDETLGRIESLSRTLSERFVRQALDEMAEIDKEARRVKEELRVKREQEAAERKIKEEMEKEERERREREERERESERERERLAAEASAHPGGADVTMAAAVAVANDVMQPAARPAEPHLPRMDLPPGIDPDFLEALPEDLRAEVLAQQLGQLAVPSGGARRAHGMAAASDFAAGLEQVSPEYLAALPPEIQIEVLQEQERMRRRQQAPTATADGSGAAAASAAAPPAQEMDVASFLASLPPDLREEIILEQDEAFIGTLPANLAAEAQLVRERAQRGGRHLLADNDMADPLAGMMRHLIRGGNPHAPTERHERDRLIAEWSESALADRAQRGAAGGHAHAPVHLHASGAGHHANVLTQLISGRAPAAAAAAAAASKRFKSKERRQLLDHVTIAGLLRLVFSSQLPNPWVRGLSGLLQTLGVHGRTRAWIVTSLLVILERLQVPVFMAAPAKGESADSANGHAASGVAGAADVRDSIQSELSHAGTAAVPADSDGLPVVTTHVARHVLDFLADFVGAYPRGLGFLLGDDWPSRGDFWEQYARAMDIPSSTAEWKKGKAPEKAWAASAAAHKGSPVAFIIELLSHPVFDRNPGHTESLLGFLSAVLKLVPIEREDGGRDGKGAAAAAAVPLPETPPRQPVGGASASGNASENATATTDNALAAGTEATDAKTDAKADAKKDRPRCVAPIIAAELLRSLVGVLSRPACTERASLHVLSALQRLATRPENREVVTMELSLGAHTLGEILCTDLEGLAAEVEVTCKSKEAAVADTGALDASSNGAALVAIVAVATPPVSRSKDKGKESVSVLDLKSLGRFTAPSSAQTLILRVLRMLASLVSPPKPAGSGPEGGASDAAAPVPTHAPTVDAHAATAAAATADAVPATTLKLDSLWECLGRTLDLLTRAEDHHCVNALLPSIEAFMVAHGSVKRAGRIHPVHAGQSQSQSQAQSQSQSQSQESHHVFGRQDSLIDPDGKAAIPLDAEVERFLRFTDRHRKILNDIVRRIPSALSGGHPFSVLVANPRVLDFDNKRAYFRNQLRRRDHAQHSATIRLNVRRDRVFEDSFQKIGRRTPDELRGRLSVRFTGEEGVDAGGVTREWYLMLSREMFNPNYALFKTSAVDRVTYQPDSKSGINPLHLEYFRFIGRVIAKAICDGKMLECYFTRAFYKHILGITITYHDLEAVDPEYYKSLKWMIENDITGVLDATFSIEISEFGAKHIVDLKPDGRNIAVTEENKREYVQLVAQNKLTSSIRAQIDSFLLGFHDLISHDLIQIFNEQELELLISGLPEIDIEDLKANTEYGGGGYSESSPQIHWFWRALRSFDREERAKFLQFVTGTSKVPLQGFKALEGMSGVQRFSVHKDFGSQDRLPSAHTCFNQLDLPEYSSYDVLRRQLLTAVNECSEGFGFG* # PASA_UPDATE: g9614.t1, single gene model update, valid-1, status:[pasa:asmbl_5791,status:12], valid-1 NODE_325_length_26923_cov_49.9527 . gene 16194 18126 . - . ID=g9614;Name=g9614.t1 NODE_325_length_26923_cov_49.9527 . mRNA 16194 18126 . - . ID=g9614.t1;Parent=g9614;Name=g9614.t1 NODE_325_length_26923_cov_49.9527 . five_prime_UTR 18055 18126 . - . ID=g9614.t1.utr5p1;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . exon 18032 18126 . - . ID=g9614.t1.exon1;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . CDS 18032 18054 . - 0 ID=cds.g9614.t1;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . exon 16773 16925 . - . ID=g9614.t1.exon2;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . CDS 16773 16925 . - 1 ID=cds.g9614.t1;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . exon 16194 16377 . - . ID=g9614.t1.exon3;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . CDS 16260 16377 . - 1 ID=cds.g9614.t1;Parent=g9614.t1 NODE_325_length_26923_cov_49.9527 . three_prime_UTR 16194 16259 . - . ID=g9614.t1.utr3p1;Parent=g9614.t1 #PROT g9614.t1 g9614 MKIRIEFGGGVELLFSNAKKQDVDLDDSKGPWTIALLLKYMRDAMLKERPELFLQGETIRPGILILVNDTDWELLGELEYALQENDTVVFISTLHGG* # ORIGINAL: g9609.t1 original gene structure, not modified by PASA NODE_325_length_26923_cov_49.9527 AUGUSTUS gene 93 6283 . - . ID=g9609;Name=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS mRNA 93 6283 . - . ID=g9609.t1;Parent=g9609;Name=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 6228 6283 . - . ID=g9609.t1.exon1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 6228 6283 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 5981 6128 . - . ID=g9609.t1.exon2;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 5981 6128 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 5744 5866 . - . ID=g9609.t1.exon3;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 5744 5866 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 5476 5600 . - . ID=g9609.t1.exon4;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 5476 5600 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 5002 5118 . - . ID=g9609.t1.exon5;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 5002 5118 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 4454 4607 . - . ID=g9609.t1.exon6;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 4454 4607 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 4045 4210 . - . ID=g9609.t1.exon7;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 4045 4210 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 3569 3656 . - . ID=g9609.t1.exon8;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 3569 3656 . - 2 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 3107 3281 . - . ID=g9609.t1.exon9;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 3107 3281 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 2675 2832 . - . ID=g9609.t1.exon10;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 2675 2832 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 2394 2536 . - . ID=g9609.t1.exon11;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 2394 2536 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 1947 2074 . - . ID=g9609.t1.exon12;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 1947 2074 . - 2 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 1547 1705 . - . ID=g9609.t1.exon13;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 1547 1705 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 1277 1426 . - . ID=g9609.t1.exon14;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 1277 1426 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 927 1063 . - . ID=g9609.t1.exon15;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 927 1063 . - 0 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 649 750 . - . ID=g9609.t1.exon16;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 649 750 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 93 294 . - . ID=g9609.t1.exon17;Parent=g9609.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 93 294 . - 1 ID=cds.g9609.t1;Parent=g9609.t1 #PROT g9609.t1 g9609 MVAKTVKTPDGQTVHLKTSFRLDQKYETIFTGGRVAVTRAGDFLFSPVNEDVKVIEIATGRVLSTLVGDGESVTCLAVTPDDAGLVVASRSQQLRLWDWRNNVCKRTWKGHDAPVAGMDFEGTSTLLATGAGDGSVRVWDVEKGYCTHSFRGHHTGVVGAVRFHPDAKKLALYTAADDGKIRVWDLRQKSLHATLESHVSAVRGLSFSDGGEYLLSAGRDRVVNVWDCASSALVKTMPVYETLEAIVVLSASVSFPGHVGVGSATADAKKGKKRRDASGADGSAADSLHFALAGENGLVQVWNVGSGSCVYTQPPQANKIQLTDLVRLNEASLLAITSDHNIVAYDLASFGRQRQFVGYNDEIIDLRFVGPEGARLAVATNSEQLRLYNTATADAELLTGHTDIILSVDANPIGTLLATSSKDNSVRIWAASSPTSPFYNVAVGMGHAEAVGAVALSRKTNAFAVSGSQDRTIKLWDTSACVADGRREVGRLHATRTLKAHDKDINSIAVAPNDKFIATGSQDKTAKLWRSSDLVLVATFSGHRRGIWCVQFSPVDQILATSSGDKTIKLWSLGDHTCLKTFEGHSNSVLRVCFITRGLQLATAGSDGLVKVWSIRTSECEATLDNHDAKIWALDVNRAEDVIVSGGADSLVNFWKDSTLIEEEEGRKKEEDLLLKEQELSNMLHQKNFRGAFALALSLGQPFRLLGIIRDLLDDDATSGQLDTLVASLPIEALGSLLGHVRDWNTNSRHARIAQRVLSAVLRSKSPESLREIPKVK # PASA_UPDATE: g9616.t1, single gene model update, valid-1, status:[pasa:asmbl_5792,status:12], valid-1 NODE_325_length_26923_cov_49.9527 . gene 20433 24306 . - . ID=g9616;Name=g9616.t1 NODE_325_length_26923_cov_49.9527 . mRNA 20433 24306 . - . ID=g9616.t1;Parent=g9616;Name=g9616.t1 NODE_325_length_26923_cov_49.9527 . five_prime_UTR 24226 24306 . - . ID=g9616.t1.utr5p1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 24202 24306 . - . ID=g9616.t1.exon1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 24202 24225 . - 0 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 23864 24055 . - . ID=g9616.t1.exon2;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 23864 24055 . - 0 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 23615 23765 . - . ID=g9616.t1.exon3;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 23615 23765 . - 0 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 23066 23488 . - . ID=g9616.t1.exon4;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 23066 23488 . - 2 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 22497 22578 . - . ID=g9616.t1.exon5;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 22497 22578 . - 2 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 22218 22349 . - . ID=g9616.t1.exon6;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 22218 22349 . - 1 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 21578 21665 . - . ID=g9616.t1.exon7;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 21578 21665 . - 1 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 21032 21172 . - . ID=g9616.t1.exon8;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 21032 21172 . - 0 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . exon 20433 20666 . - . ID=g9616.t1.exon9;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . CDS 20565 20666 . - 0 ID=cds.g9616.t1;Parent=g9616.t1 NODE_325_length_26923_cov_49.9527 . three_prime_UTR 20433 20564 . - . ID=g9616.t1.utr3p1;Parent=g9616.t1 #PROT g9616.t1 g9616 MADCNFLQKAIELVTQATQEDQKQNYEEALRLYMHSLEYFMTALKYEKNDRSKQAIRDKCAQYFERAEKLKKFLASGDKKKKAVPEGGGGTGGSGGKKGSKTDDEDEDEDDPEKKKLRGALQSAIVQEKPNVKWSDVAGLEQAKEALKEAVILPIKFPHLFTDKRVPWRGILLYGPPGTGKSFLAKAVATEANSTFFSISSSDLVSKWLGESERLVKQLFELARENKPAIIFVDEVDSLCGARSENESESARRIKTEFLVQMNGVGQDNNGILVLGATNIPWSLDSAIRRRFEKRIYIPLPEENARAEMFRLNIGKTPNTLTQADFKELGRRSQGYSGADVGIVVRDALMQPVRKVQMATHFKLTRGKSPTDPTMEVDDLWMPCSPGDPEAKEMSWMDVPGDKLKEPVVTMQDMLRSLTSVKASVNAEDLTKQIKFTEEFGQEG* # ORIGINAL: g9611.t1 original gene structure, not modified by PASA NODE_325_length_26923_cov_49.9527 AUGUSTUS gene 10511 11533 . + . ID=g9611;Name=g9611.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS mRNA 10511 11533 . + . ID=g9611.t1;Parent=g9611;Name=g9611.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 10511 11533 . + . ID=g9611.t1.exon1;Parent=g9611.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 10511 11533 . + 0 ID=cds.g9611.t1;Parent=g9611.t1 #PROT g9611.t1 g9611 MVSTRSKGAGAVSVDGSSGSARAPRKSVSKAADSATAKSRNASHDSIEDKKSASTRGRKIRASTTDDSLKEKESDAQSRVQPVSEYAAAPTRRTRRAVAHTDKDEAPAPVGVGGKRKTRNDGDTNSASAPHEVISPSKRRKTAAKASDAPAPSVPSTDAASDDEAPEDVSFAAGKAAAVSRVDLERSARDVHADERKKKRVLVAERDRRQNEEKKGRLSMSILKALARSPKMQGAGQRAVGAKDLVTVDMSENDSFGMGSSIPDELAKANNDVRRVGGMEVAVLDRFVEKRAHPVSTDAARFLQRRLYGGAVKRVDAVRFMAQKQRSSVGAPSQRFVCKR* # ORIGINAL: g9613.t1 original gene structure, not modified by PASA NODE_325_length_26923_cov_49.9527 AUGUSTUS gene 13936 14982 . + . ID=g9613;Name=g9613.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS mRNA 13936 14982 . + . ID=g9613.t1;Parent=g9613;Name=g9613.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 13936 14982 . + . ID=g9613.t1.exon1;Parent=g9613.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 13936 14982 . + 0 ID=cds.g9613.t1;Parent=g9613.t1 #PROT g9613.t1 g9613 MFAASLVTAPFVGVILARYSAALPFIVATAISLLDIMYIWFFVPESLPDAQRHTRATMVLDWRQGNPFVSLGQMFRSRALLRLSAMVFFSYLPEAGQQMLILQYLDARFGFTKMELAAYIGCVGILAILAQTVVLRVLSTRLGDSFTVQCGLALGIAQLLLFGVAQNGIATIPAGALAALSSITYPALSALVSRQSDPEQQGAMQGLVTGIRMLCNGLGPALFGVLFQAVGFTLSVSADGSGDPAPATSSTQSAGLPFLVGAALVFIALVISRSLPELDEYASVPVEDGEEFEMVSAGAGADAAVVVEGAAAADVGPKSRKERLPIAASTSLELESQVGPLHSDTDDS* # ORIGINAL: g9615.t1 original gene structure, not modified by PASA NODE_325_length_26923_cov_49.9527 AUGUSTUS gene 18607 20419 . + . ID=g9615;Name=g9615.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS mRNA 18607 20419 . + . ID=g9615.t1;Parent=g9615;Name=g9615.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 18607 18951 . + . ID=g9615.t1.exon1;Parent=g9615.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 18607 18951 . + 0 ID=cds.g9615.t1;Parent=g9615.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 19085 20419 . + . ID=g9615.t1.exon2;Parent=g9615.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 19085 20419 . + 0 ID=cds.g9615.t1;Parent=g9615.t1 #PROT g9615.t1 g9615 MCSIEDDEERHAAPGVTSDFGILSLEDEWQRTQVGDAHGGAAHQEPATLASDTAAPAASHVEKLCAQRACVRCGLPPAVRLRDRDVFCRKCFTESFVHRFRAQLGKTRAIKPSDSVMLALSGGPASSALVRLFVDSYVRDCATVLGDDSAGGMRARGERRIRNKRTVIVHIDESVVLGLSSAEQDAVRCHMDSVAAECGVAVPIRIVDICEAFAGGDGSVRPLSVESAASSDSADGFRIALNEGAPCISYTEHNSGDASASAVATQRLCAFLDSLSSLSAREDALRILRWQLIARVAQQEGCGVVVAGDSASVLSVRMLASIAKGRGASLSQETGFVDDRYAALSVKVIRPLRSMLAKEIAIYNRFAGVEAIAVRQWSTCALPRASIDTLTEAFVVGLQSAFKSTENTVLATADKLASERNGSANALMLRCALCSASMSVRPINAAAADRHGLSRSSSSRPCGDGTAPLSSCGDCSCDSDNAREQQQGVGLADDDASALVCRGCRTILREVKPGAHPQLPVFVAEGALAVHAELRRSVLRTEIADFLLSDDDEPEKNVL* # PASA_UPDATE: g9610.t1, single gene model update, valid-1, status:[pasa:asmbl_5793,status:3], valid-1 NODE_325_length_26923_cov_49.9527 . gene 6985 9384 . + . ID=g9610;Name=g9610.t1 NODE_325_length_26923_cov_49.9527 . mRNA 6985 9384 . + . ID=g9610.t1;Parent=g9610;Name=g9610.t1 NODE_325_length_26923_cov_49.9527 . five_prime_UTR 6985 7305 . + . ID=g9610.t1.utr5p1;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . exon 6985 7482 . + . ID=g9610.t1.exon1;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . CDS 7306 7482 . + 0 ID=cds.g9610.t1;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . exon 7657 7725 . + . ID=g9610.t1.exon2;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . CDS 7657 7725 . + 0 ID=cds.g9610.t1;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . exon 7948 9384 . + . ID=g9610.t1.exon3;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . CDS 7948 8643 . + 0 ID=cds.g9610.t1;Parent=g9610.t1 NODE_325_length_26923_cov_49.9527 . three_prime_UTR 8644 9384 . + . ID=g9610.t1.utr3p1;Parent=g9610.t1 #PROT g9610.t1 g9610 MPPASRQSPSVTMSATTALPVGKGSSLSPAVDPRGTGSQTTLGLLSTLQNKLTKATEQSNAGLIDSLLRQLKAVPVTSELIQSARVGTDFQAVRELMKKSADETIRVRHTATFKGILQKWASLRKKAPSGTSPNARKGQSPLTPRTPSNATAPASPLGASAAATVHCSSAQSAAAVVANVPSPAPSSQDADVPVAPAVQTQPQPSLLRIKLSVSGTSTIIERKVVSSTAAAPAPVRPQLPTLPSLSERKRKHDDALEEVCAKRRRIASACAPEGLIAGVDGCFASNGDCVQWHAWADAFAVGDLSVASYALPF* # ORIGINAL: g9612.t1 original gene structure, not modified by PASA NODE_325_length_26923_cov_49.9527 AUGUSTUS gene 12749 13608 . + . ID=g9612;Name=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS mRNA 12749 13608 . + . ID=g9612.t1;Parent=g9612;Name=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 12749 12823 . + . ID=g9612.t1.exon1;Parent=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 12749 12823 . + 0 ID=cds.g9612.t1;Parent=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 12985 13137 . + . ID=g9612.t1.exon2;Parent=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 12985 13137 . + 0 ID=cds.g9612.t1;Parent=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS exon 13324 13608 . + . ID=g9612.t1.exon3;Parent=g9612.t1 NODE_325_length_26923_cov_49.9527 AUGUSTUS CDS 13324 13608 . + 0 ID=cds.g9612.t1;Parent=g9612.t1 #PROT g9612.t1 g9612 MPPAPTETRRRRQSYMKSTWMWGQWAPRRGRVRHAMVVIFLEFFAIGLLSTILPDLFSNFFKNSMFLVSGVSQGVKGLLSFLCAPLLGMLSDFYGRKVFLLVAVFFTCLPIPFLLLSSMWYYTIVFAVSGIFSVTFSIVFAYASDITEESERSAAYGKVGLSVEICLEYH* # ORIGINAL: g9104.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 11055 14739 . - . ID=g9104;Name=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 11055 14739 . - . ID=g9104.t1;Parent=g9104;Name=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 14658 14739 . - . ID=g9104.t1.exon1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 14658 14739 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 14457 14554 . - . ID=g9104.t1.exon2;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 14457 14554 . - 2 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 14056 14160 . - . ID=g9104.t1.exon3;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 14056 14160 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 13625 13857 . - . ID=g9104.t1.exon4;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 13625 13857 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 13117 13312 . - . ID=g9104.t1.exon5;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 13117 13312 . - 1 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 12763 12915 . - . ID=g9104.t1.exon6;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 12763 12915 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 12324 12434 . - . ID=g9104.t1.exon7;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 12324 12434 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 12002 12082 . - . ID=g9104.t1.exon8;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 12002 12082 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 11643 11803 . - . ID=g9104.t1.exon9;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 11643 11803 . - 0 ID=cds.g9104.t1;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 11055 11427 . - . ID=g9104.t1.exon10;Parent=g9104.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 11055 11427 . - 1 ID=cds.g9104.t1;Parent=g9104.t1 #PROT g9104.t1 g9104 MSEEGALHAGDKETSEMLRRASVRAWEVLTAPLNVEGRRSAHNVCIVGSGPAGFYTASHILKGAKDDLRLDIYDRLPVPYGLVRYGVAPDHQDVKNVTAQFRKIAEDKRCSFVGNVNVGRDITVAELRRLYSAVIFATGADLDKALGVPGESVPGVHAAREFVGWYNGHPANSTLAVDLSTESAVVFGHGNVALDVARILLSQPDRLHPTDITSMSVATLRQSKIKTVYVVGRRGPLEVAFTIKELREIVTLEGCKTVIDPADMDVSAEDLAAIANDRPRRRLTELLQKTAAESNQPKEGATRTLKLLFKRSPHSFEADANGRLSKVKLEINTLTGGVADRRAVGTGVTETIDAGLAVRSIGYKSIAIPGVPFDSARSIIPNKDGRVVDPSRDNAVVAGMYCSGWIRRGPVGVIATTMADAHGTAARVLEDLSHSNEIAALRRDQLVTSLNISEGVAVAIPTDSIPFDGGLGGAKAVLASRGARPTSFGDYLTIEEKEIGHGTTQGKIREKLLSVDHMIAVLDAAKEKGA* # ORIGINAL: g9103.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 9350 10913 . + . ID=g9103;Name=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 9350 10913 . + . ID=g9103.t1;Parent=g9103;Name=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 9350 9691 . + . ID=g9103.t1.exon1;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 9350 9691 . + 0 ID=cds.g9103.t1;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 9822 9965 . + . ID=g9103.t1.exon2;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 9822 9965 . + 0 ID=cds.g9103.t1;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 10338 10418 . + . ID=g9103.t1.exon3;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 10338 10418 . + 0 ID=cds.g9103.t1;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 10677 10913 . + . ID=g9103.t1.exon4;Parent=g9103.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 10677 10913 . + 0 ID=cds.g9103.t1;Parent=g9103.t1 #PROT g9103.t1 g9103 MCMRWSSLLFGATRLSTDRLVAASSRARGSQRTRSITTGMSITQARIEVERNFAIPKQSDGRDALDVVCTAVESAGARLLSSRTFSDVYVDTQEYTLAMKDIWLRRRDNVWELKARVKNCVVARQDATDVYEETTGDADIIARLRSLSLFGTSEDFSTVDALGLTIDLDRASFGHCAGEIELMVERQSDVAAAEAGIVALAARLGFDVSQRPLGKMQCYLLWRRPELHASLVHAGIFGALSTPAVESDTYYERPASSVAAPKAHQVK* # ORIGINAL: g9102.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 2353 8666 . - . ID=g9102;Name=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 2353 8666 . - . ID=g9102.t1;Parent=g9102;Name=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 8434 8666 . - . ID=g9102.t1.exon1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 8434 8666 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 7991 8060 . - . ID=g9102.t1.exon2;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 7991 8060 . - 1 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 7469 7762 . - . ID=g9102.t1.exon3;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 7469 7762 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 6981 7162 . - . ID=g9102.t1.exon4;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 6981 7162 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 6416 6551 . - . ID=g9102.t1.exon5;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 6416 6551 . - 1 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 4977 5266 . - . ID=g9102.t1.exon6;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 4977 5266 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 4213 4789 . - . ID=g9102.t1.exon7;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 4213 4789 . - 1 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 3655 3855 . - . ID=g9102.t1.exon8;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 3655 3855 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 3187 3255 . - . ID=g9102.t1.exon9;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 3187 3255 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 2814 3028 . - . ID=g9102.t1.exon10;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 2814 3028 . - 0 ID=cds.g9102.t1;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 2353 2554 . - . ID=g9102.t1.exon11;Parent=g9102.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 2353 2554 . - 1 ID=cds.g9102.t1;Parent=g9102.t1 #PROT g9102.t1 g9102 MEADIAAPQTASQPSQPQPAATTHTTAQAAGTVTLEECLSVAESVGRFLRSGADGGGLSRSEYQRFWTTLSATNNATSYLICCIGKLLALDTGEDRTSLVELVESLLTKRLTQEDWAEPRPQGPAQTPGQGGAVFLTPMGDAEASAHADLRIALINTMYFCALFHSFENDSQPLRMAFRKWTARRGSFKAPGKSEFESQMFKLLAASDLWEGEEPLADFVNICVGVLRPGDLSQHPSAPLSLTDNKLLALSVLHYFVKRRLMLGHLNTFVLRHLLARLERASVDYERGEHLISPLLFLFRDFLASILLAFYGSNCDYESLCRALDRTSPNQMHSLYERASDIMAQALLQGDDDTALALATIRLNELQASIVESATSESADDGPSYGQTNNIPHPCVRLPQLRITCHGFMADAISIGTHDHVAPGTTIPLASALEPMQKILSDAQSDLDHNTMASGTGHGIGTRVLRVGIAGGDLAISSVARAFVALKASKPSLFNGLRLQFYPVPLLSGNKEHDGFFSRFISHFDRWYERNVLVATHASLRTFPILRPGADPLVDSEYHARNKAEAPSPSHWLRSSVENYFREASNRVELRLFQAEITVTSGTTFIDEKLIVRVVPFCQRVELGAAVYLREANLGGEAFGTGSASVSSKTMGKAFKFIPPELAIKFAEVGLTGLVRPGKTLDTKPYWTLFLSNIPRANDRCCVPDAQSSSLEMYVLEADAGRKISKGKTGGKEEGGNTHHIGTIEIDAKGQTKAFSLLIDDQLIANVVRCRISPVREQNLGGGHVPIDGPLTITPITTDGAPHNEDVKMSIMTYLPFDHVCG* # ORIGINAL: g9105.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 15881 18258 . + . ID=g9105;Name=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 15881 18258 . + . ID=g9105.t1;Parent=g9105;Name=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 15881 16598 . + . ID=g9105.t1.exon1;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 15881 16598 . + 0 ID=cds.g9105.t1;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 16720 16785 . + . ID=g9105.t1.exon2;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 16720 16785 . + 2 ID=cds.g9105.t1;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 16997 17128 . + . ID=g9105.t1.exon3;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 16997 17128 . + 2 ID=cds.g9105.t1;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 17299 17688 . + . ID=g9105.t1.exon4;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 17299 17688 . + 2 ID=cds.g9105.t1;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 17867 18258 . + . ID=g9105.t1.exon5;Parent=g9105.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 17867 18258 . + 2 ID=cds.g9105.t1;Parent=g9105.t1 #PROT g9105.t1 g9105 MAPRRSAVEDALDLTGVANHDMSAPKRKSLVFDGSRMAALEGQRQIEKVYAENADALDKLTTRETEMRSFMKRLSVPTIQTPLVGSSEDAVSKPSSSRSQSPLLDAQHSPPRTLDREAVLSDRDSMPSLPNRRRNYSVDHITYSQSNANTHLDVRSGEDYHRGRVSPLLPLGSIQGVSGASDVDRDGHGEMNGPSRSPLSFTRPSLPRKNRSLDHIPDLSRLLSRARVAAQVSETIPADNTMFDGVGTAATPDSPPLPDFEMGSKSKHPQKLRMPPKRRSFEKIQTQPSPTRTVEDEHDAIHIPQVSEAKLLVSAEQSEPRRMSKSVSVDFHDRPQRPRSVNDDADARSLPRRESLGGDRSDDGPLLGRRRHRSHNEADTNKADKLSPRGVSGLASSGAALGGGAYAHDHLPSCRGALPTETADQVYIPTATNLTSAHHHLSDSLSNIAHPDSEVNAPSHHIRSIAEPILKTTDSNHPNTSHASSHGKKPSFSSTSGSLEDLRTPHSAVSSRPSSSARKAAPPLEITVRLNALHGILPTPPSRNVIFPRKADREDELGDSTDEDR* # ORIGINAL: g9106.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 18782 20250 . + . ID=g9106;Name=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 18782 20250 . + . ID=g9106.t1;Parent=g9106;Name=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 18782 18988 . + . ID=g9106.t1.exon1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 18782 18988 . + 0 ID=cds.g9106.t1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 19072 19140 . + . ID=g9106.t1.exon2;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 19072 19140 . + 0 ID=cds.g9106.t1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 19289 19365 . + . ID=g9106.t1.exon3;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 19289 19365 . + 0 ID=cds.g9106.t1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 19472 19647 . + . ID=g9106.t1.exon4;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 19472 19647 . + 1 ID=cds.g9106.t1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 19829 19984 . + . ID=g9106.t1.exon5;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 19829 19984 . + 2 ID=cds.g9106.t1;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 20105 20250 . + . ID=g9106.t1.exon6;Parent=g9106.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 20105 20250 . + 2 ID=cds.g9106.t1;Parent=g9106.t1 #PROT g9106.t1 g9106 MANVTIDASPYAAMGAFEASWTYMTDHYSEWQISTWGNMLVHEVLYFGLCLPGFLCQFIPAMQKYKIQKDKPETFERQWKCFKLLIWNHLFQSLMIFGTFGYTQHMKIPYDYKSMPHWYILAAQAFGCLVIEDTWHYFLHRLMHHPRLYQYVHKVHHSFQAPFGMVAEYAHPVETMVLGAGFFIPVYLFCNHFILLWVWVTVRLVETIDVHSGYDFPWNPLRLIPFYGGARHHDFHHMNFVGNYASTFTWWDRIFGTDDKYHAYCEKLEKAEKKIK* # ORIGINAL: g9107.t1 original gene structure, not modified by PASA NODE_319_length_27091_cov_40.4567 AUGUSTUS gene 20869 25808 . + . ID=g9107;Name=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS mRNA 20869 25808 . + . ID=g9107.t1;Parent=g9107;Name=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 20869 20890 . + . ID=g9107.t1.exon1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 20869 20890 . + 0 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 21005 21753 . + . ID=g9107.t1.exon2;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 21005 21753 . + 2 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 21992 22209 . + . ID=g9107.t1.exon3;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 21992 22209 . + 0 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 22463 22591 . + . ID=g9107.t1.exon4;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 22463 22591 . + 1 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 22744 22900 . + . ID=g9107.t1.exon5;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 22744 22900 . + 1 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 23148 24901 . + . ID=g9107.t1.exon6;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 23148 24901 . + 0 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 25030 25493 . + . ID=g9107.t1.exon7;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 25030 25493 . + 1 ID=cds.g9107.t1;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS exon 25765 25808 . + . ID=g9107.t1.exon8;Parent=g9107.t1 NODE_319_length_27091_cov_40.4567 AUGUSTUS CDS 25765 25808 . + 2 ID=cds.g9107.t1;Parent=g9107.t1 #PROT g9107.t1 g9107 MARSVSHAFAEFSDDEGADYDYYEETVDAAGHDARSVAHKGRDSFAYDSRVDGDAAARGVAAAALAGLYNTSDTDSDDDGTPRAVNWAGKANKAKKSLIEFKPISDGRDMHREVKAKAHPSGIRLAFKMKSDCRLVRDTFIAHGFREVGANSDDFNVLWTGSHVKPFALRQLTEHQRVNHFPRSFEITRKDRLYKSIQRMQQVHGKRHFGFLPTSFLLPSEYNEFYGEYLRDRGPWIVKPVNSSRGRGIYLVNHVEQIPSDELLVVSRYIENPLLVDGFKFDLRLYVVVTSFDPLRIYLYDEGLARFATERYDKSVRTLSNSFMHLTNYSINKNSDKYVASNDPDLDDYGNKWSLSALLRYLREKDCDTATLMLRIEDIINKTILSGEVAIASACKMFVPHRNNCFELYGFDVLVDDQLKPWLLEVNLSPSLACDAPLDMRIKSKMISDMMTLVGIPAFDATALREQKRKQHMDALVKNAMGPSRKSHPMSGMFGASARSSSPSGGRHVPGQRPKQRPETPECKKGSRDVGLSPGSRKVLADTIAEEKRRGGFVRIFPTEDTWPNYSGFLEDRSGSLNAMLNERLFPNGRPTTSRALGLAINGATGMAPVSVTAFERVRQYEKRSDAGTAAAGPSSAYRRAQSAPAGSRQAATETVASRHASEDAVQCDVRVSSFDNMASMERLDEIASRDGAHASGKGAAGEGAVPPGQEKAGRDRAHSARGSRPKSSSAAQQPQQVFGRHLRPMQAREAFSTYLERVQHRLEETAAQSTGMAAVQSRGEDQLVLIGRFLQRAAANMGGGSFRVVIPSSRLPMDERQILLARQLAEFVRLYRRDSERLAQRQEQFDRIVKTRGRTPSACHDAAMMPPQGHGAGGADSVSDAVFAVYLSDASEADLEEVLSDFTKHNKGPGIFSGDASAESVPVVAQVASSRVKSAPATTLRGRAGLSVAAVAAVASGLDVRRGVHTEGHAGDAWDAAEDDISIEDDDGDGSSIESDHMYDARVGSLRSSLRNPSKSAPSVRVQISDKVTTNDPRRPREKGTPASSKMPSNTYTRGSSAGQSLYTGNIGSAAAQRASHGLSHSQSAGAHGRTRVNSGTGANRAPSAETTATTPLRRPISAVRGSSMRAGEGVASKASPYSGAPYKMVTTQVALGSQRPQKTIIQGWNSDVDRLLGMRT* # ORIGINAL: g2228.t1 original gene structure, not modified by PASA NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS gene 70 2808 . - . ID=g2228;Name=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS mRNA 70 2808 . - . ID=g2228.t1;Parent=g2228;Name=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 2669 2808 . - . ID=g2228.t1.exon1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 2669 2808 . - 0 ID=cds.g2228.t1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 2000 2462 . - . ID=g2228.t1.exon2;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 2000 2462 . - 1 ID=cds.g2228.t1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 1428 1842 . - . ID=g2228.t1.exon3;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 1428 1842 . - 0 ID=cds.g2228.t1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 954 1333 . - . ID=g2228.t1.exon4;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 954 1333 . - 2 ID=cds.g2228.t1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 516 752 . - . ID=g2228.t1.exon5;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 516 752 . - 0 ID=cds.g2228.t1;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS exon 70 258 . - . ID=g2228.t1.exon6;Parent=g2228.t1 NODE_3214_length_4002_cov_34.9977_potentialcontaminant AUGUSTUS CDS 70 258 . - 0 ID=cds.g2228.t1;Parent=g2228.t1 #PROT g2228.t1 g2228 MADEWFPATKIKCLQLCKTLIDSIEEPKKQRQLEGDPINDGNGADDVFLRRSKYMATHFIVRSSLLTRWKQHLFTADSDTETRTWYQEYVEMFAALPTSFLPSPATEQRASTDIAEVMNLGRAQMDNLEKLGRLECRGIVKTIRNKIISMIERANNYSGPGLCMWETVISILSQFDAAYDRCQPEFRLHAELWTPLFKAFFGGSDHKDTKKLACAMRLTLEYHVRRLAKSLTQEELASIRVARILISGYSAELVIAAPLIEEDTQATGDVVMATAFIEGCGRLRIGDNGGFATNLHFKDIMKLSRWCERIAEEGVRLDAFYSQATDAELLLPAPLTYDRDPKGAAGPRKPAAVRALETAAVRALAAAAVIIWIARPQALERRTTSRVKVARAGSGMHAVWTRSPPGSCSAGTVDAPFSVTVDTADDNEGDVGAARVRGASGWRGLLLRAAVDAAGAVRRHPRKIFQSRNTEAWYVEEATDGEGLAVVVKDGRCRHEIELLCRFSDNPAFVQLRGWAQDANHRYRYAIVLDWLDAETPGRTPTPVIALCFLRDALSALSALHDAGFVHCDFKPGCMLFDWARLRWRMVDFDLAKRVGSDGIVAGSVRTK # ORIGINAL: g2876.t1 original gene structure, not modified by PASA NODE_6721_length_518_cov_48.6817_potentialcontaminant AUGUSTUS gene 2 518 . + . ID=g2876;Name=g2876.t1 NODE_6721_length_518_cov_48.6817_potentialcontaminant AUGUSTUS mRNA 2 518 . + . ID=g2876.t1;Parent=g2876;Name=g2876.t1 NODE_6721_length_518_cov_48.6817_potentialcontaminant AUGUSTUS exon 2 518 . + . ID=g2876.t1.exon1;Parent=g2876.t1 NODE_6721_length_518_cov_48.6817_potentialcontaminant AUGUSTUS CDS 2 518 . + 2 ID=cds.g2876.t1;Parent=g2876.t1 #PROT g2876.t1 g2876 REIADLRKQQADLTAQHALKEQHSDVFRLFAQRERPARPEDIKDIAAERKVFTSALQALGVLADVPSDPTTGLPPALSWADALLTPRQLADILRQYPVPAGSGHVFTLGTLSPADLADIHAEDLKRDKERVHAVQPFLKAFLPIIDLFCALFQADADTITQDEIDSARDAV # ORIGINAL: g4744.t1 original gene structure, not modified by PASA NODE_2516_length_6032_cov_21.1714 AUGUSTUS gene 156 899 . - . ID=g4744;Name=g4744.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS mRNA 156 899 . - . ID=g4744.t1;Parent=g4744;Name=g4744.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS exon 156 899 . - . ID=g4744.t1.exon1;Parent=g4744.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS CDS 156 899 . - 0 ID=cds.g4744.t1;Parent=g4744.t1 #PROT g4744.t1 g4744 MMQVATPINFMMSHHKTGDPRAYALLAAIYHCGHSWQQGHYIAVVKSEGEYWRCDDEHITRIPRADVAGAWALPSDATAYLLLYGCADKHSSHTDQISIKTMMQGSASLIAATIESNETGAYIYDEVPDGGADQEEETQQHPIAPSVPSAPQTDDTSQATRPTSAAIHINNNRTHIRTRSRKRSVKTGDISDGGADQEEETRQHPIAPSVPSAAQTDDTSQATRPTIAAIHINNNHTHLRTRKRTEV* # ORIGINAL: g4745.t1 original gene structure, not modified by PASA NODE_2516_length_6032_cov_21.1714 AUGUSTUS gene 2058 4658 . - . ID=g4745;Name=g4745.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS mRNA 2058 4658 . - . ID=g4745.t1;Parent=g4745;Name=g4745.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS exon 2058 4658 . - . ID=g4745.t1.exon1;Parent=g4745.t1 NODE_2516_length_6032_cov_21.1714 AUGUSTUS CDS 2058 4658 . - 0 ID=cds.g4745.t1;Parent=g4745.t1 #PROT g4745.t1 g4745 MPAMPSIPLSPQEQQADNAAGNESDHDSDADADEAIELLKADRDLQSMPRHSDSSAAAVASNDGSQSSLSLSRESSVPSSDDDADLPEVNSDLPTPTKLRGGMRCPNFRDKKQPPDDYNTFGADTLVQQHSGSHPTSQTNIRLRHSGSTGDETSAAVHGAVTPQRTHTIEPLRHSGSTTGDGECATVQGAVTPQHTHTTAPRRNSGSTPGDEESATVHGAVTPQHTHTTAPRRNSGSTTGDEETATVHGAVTPQYIHTTAPRRNSGSTTGDEKSATVHGAVTPQHTHTTAPRRNSKSTVNSHGMAAQSQINSALTGNGAKRQVRLTGLAVVSWMLYFVRVAITIAITVWYQAIFGHAMAFIADGDVRQHIITVIVALSCASIWYCHGSGVDDQSPLDAAEWGGSADGASGQMPAISGQPGLKGGNGCTTDDADKTSASSSETEGNAGAKRCDSTSSSASHNDNKGRSHDARPAGSVGAQSDQTYSFFLNAYLMVTCVFCAVSQRFRVVAFGVMMGQTARHYRGYFSNLLAAIPDDVMAVWDALATTTNAQEGMHSRTYSSSGYKHTIVEGIKHLILRAELEESTYNAICEGDFTTKTPAQSMRRKSRPVPKDGIRGRVIQGPVQTDGPPETPLAVHGPARPAPTHSPKQSARPKAYTAMQKPTAWAPTTVSSATNYQGLSNNGWSCAYDAVLEPLCSVFAYASPVLHSLLQRAVQHTPLPHFEALVLFLSRRTVLAATAGDDVRDAARVEMESDREALVNSISNSIKLVTPGCWEDVAFWVYLLQNVTRKCSTAQEIFGVTAALTSTGAVCGASHNIEETNTSKGGLTFLRLPLDRLPIQLRGKPASLQDLIDAVPQSWIGRSDGE* # PASA_UPDATE: g989.t1, single gene model update, valid-1, status:[pasa:asmbl_10228,status:3], valid-1 NODE_985_length_15064_cov_45.7466 . gene 5957 10389 . - . ID=g989;Name=g989.t1 NODE_985_length_15064_cov_45.7466 . mRNA 5957 10389 . - . ID=g989.t1;Parent=g989;Name=g989.t1 NODE_985_length_15064_cov_45.7466 . five_prime_UTR 10258 10389 . - . ID=g989.t1.utr5p1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 10155 10389 . - . ID=g989.t1.exon1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 10155 10257 . - 0 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 9489 9884 . - . ID=g989.t1.exon2;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 9489 9884 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 8923 9300 . - . ID=g989.t1.exon3;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 8923 9300 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 8260 8649 . - . ID=g989.t1.exon4;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 8260 8649 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 7717 8061 . - . ID=g989.t1.exon5;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 7717 8061 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 7033 7443 . - . ID=g989.t1.exon6;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 7033 7443 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 6265 6930 . - . ID=g989.t1.exon7;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 6265 6930 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . exon 5957 6137 . - . ID=g989.t1.exon8;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . CDS 6067 6137 . - 2 ID=cds.g989.t1;Parent=g989.t1 NODE_985_length_15064_cov_45.7466 . three_prime_UTR 5957 6066 . - . ID=g989.t1.utr3p1;Parent=g989.t1 #PROT g989.t1 g989 MRSTMYQGRVFGFYFLAAVLVFTAGGLVSVADCQNVNLTALQIWRTDIEPNHPGFPLRAKLYALAATLSKKSGTAITSVSIALNTKAPLSNIMSDLSVCTDVTGCTVTLQFDTPASFVGDLSAPVGRNLNVTSLKLVVDDSTNPAAEWTQSQLESPRFQSTLFIGRDRNPPVLRSFGIVVNPGSASVTVSFVVVDVDSGLPANTQISVTLGISQLDSTSGFDFSGKVSCPIPASVTSPRAVTCSITRPLQNGVDATKGLWASLDSFQIADYMSNALTYSNDSPFPSRYVIASASIAPLEDPVFRTVFIDPCYGYSAPDPTSIIVGVYWKGRVLGSVQPTFTIRKGDTVRAISFDTAVMTTDSSLVETHMSLSYTFNENQPSPPLDPGQWYLDTITIQESTGVQRTVAVPRAQGMFFVGDATFPPRSDLPKLDARTFDLTYSVEPGKPSYTVAIVADVTASGGGLCNWEFQIQFKAPSGANIQFSDAQSGPFPGKFIWTPPARENYGTLTSVTIKDAYGRIAQIDGKTLPKQRVLLRIDTLPPNVTSIANTPSFGVAPDFTSVNFTQTIAFVDNHSGPSAITGDYFLIVGPATGVDPATNANATIQLSNGELLPSSDWSVRRVRFNYSGDAFAQAPRGVWSVLELRYCDERRNCRNASQSFLNSSNINPTFLVDENCGCSGPGTVNTGRKCNPVTGACLCKSNVSGAACDTCKPFFFNLAQENPSGCTPCSCIEANSLSCGLDGKCLCKASYSGSSCANYSDTSASSGDPGASAAKSSGGGIGVGVIAGAAVGGVAVVGAAVGIAIYIRQARVASNAEDPSLIGREEGITMHGFGGTARKAGKKGNFEYSEAQYERPQGFSNSGQGEYYSAPANALPNSRGGNINVIHNPQSDLYTDPTASTSDYSQPQGAAVYAQPIRK* # ORIGINAL: g990.t1 original gene structure, not modified by PASA NODE_985_length_15064_cov_45.7466 AUGUSTUS gene 10964 14954 . - . ID=g990;Name=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS mRNA 10964 14954 . - . ID=g990.t1;Parent=g990;Name=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 14802 14954 . - . ID=g990.t1.exon1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 14802 14954 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 14458 14649 . - . ID=g990.t1.exon2;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 14458 14649 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 14194 14305 . - . ID=g990.t1.exon3;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 14194 14305 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 13704 13803 . - . ID=g990.t1.exon4;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 13704 13803 . - 2 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 13472 13532 . - . ID=g990.t1.exon5;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 13472 13532 . - 1 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 13080 13172 . - . ID=g990.t1.exon6;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 13080 13172 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 12653 12812 . - . ID=g990.t1.exon7;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 12653 12812 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 12187 12389 . - . ID=g990.t1.exon8;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 12187 12389 . - 2 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 11145 11796 . - . ID=g990.t1.exon9;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 11145 11796 . - 0 ID=cds.g990.t1;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 10964 11040 . - . ID=g990.t1.exon10;Parent=g990.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 10964 11040 . - 2 ID=cds.g990.t1;Parent=g990.t1 #PROT g990.t1 g990 MCHSARQTRTPRLSISERVEQLAKNKAKRWNIAAEIKKTEETYVSDLRTLESMRQDLAAVAATSPRPMVTAQQVRIIFANVETLHKFHSDFLLRVKERMDNWFDGQCIGDLFVAVLNNLKQYTTYINNFDSADALVKQISDATPQFREYLTVELLKYTKQDHPDYAHLSSAVNGIRSVTEFLNEAKREAERQVRAAQLLAGIKDMPVILNATRKFIGELSAQEIQLRPGSVPPVVLKIKQGVMLLLFDDIVVQLTKTRNLRGVVKLQFEEVMSVAEIRLEDFGERFPEDQEVCTIFQFHKLSGSRTYRTKTTSEKSGFIEDFRRVRKAYSSKAGVESDPSPLQPPLIAMHAVSDEALNADHAPAQLPSSTSSDPLFPIKIGNVGRTFVGLFGLSSPQAPRSLSHSRSQSQTFPSPRLGLGVVRRESDKEQRHVTDAPRDLPRDHKDQRESIKGRSVALASSPSSQGAPALERQASVPSHSPSTQSAAVPSSPVPIVQIQRDEYLGEGKGGDSPLDAISLAEASDLVAPLPDSLSDSFSRKGSISRAPSLQASSSSLDSTDSNSKHAEALVPDNKQAAASPQPPIELRYTDPKKIDFLLEW* # ORIGINAL: g988.t1 original gene structure, not modified by PASA NODE_985_length_15064_cov_45.7466 AUGUSTUS gene 4283 5401 . + . ID=g988;Name=g988.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS mRNA 4283 5401 . + . ID=g988.t1;Parent=g988;Name=g988.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS exon 4283 5401 . + . ID=g988.t1.exon1;Parent=g988.t1 NODE_985_length_15064_cov_45.7466 AUGUSTUS CDS 4283 5401 . + 0 ID=cds.g988.t1;Parent=g988.t1 #PROT g988.t1 g988 MSLRAGLRGSAAIHSGVSSLVGRTPIVAINDRMPNLPRNVDVYAKVEFFNPSSSVKDRLALGAILDAEQRGLLKPGDTIVEATSGNTGISLAMLAAERGYKCVITMTEVFSVERRKIMRAYGAKVVLTPAKDRATGMVKKARELAERFGWFWPRQFETEANAAIHARTTGPEIVDAFRERPLDYFVAGYGTGGTMQGVAKVLKVASPSTRIVLAEPELAPLTSDRAAQKREADGSSAENHPRFNPHPVEGWTPSFIPLVLDRAFELNLVDDTVRVSNSESVATSLDLARTQGLFVGISAGASMAAALKYVRAVRDKDPDGKPISVLTVLPDTGERYLSTPSFSAAIAAEMNAEEIEISNSTPGFHMPPPQPK* # PASA_UPDATE: g1840.t1, single gene model update, valid-1, status:[pasa:asmbl_8127,status:12], valid-1 NODE_54_length_49013_cov_42.3281 . gene 28470 36694 . - . ID=g1840;Name=g1840.t1 NODE_54_length_49013_cov_42.3281 . mRNA 28470 36694 . - . ID=g1840.t1;Parent=g1840;Name=g1840.t1 NODE_54_length_49013_cov_42.3281 . five_prime_UTR 36606 36694 . - . ID=g1840.t1.utr5p1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 36467 36694 . - . ID=g1840.t1.exon1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 36467 36605 . - 0 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 36172 36312 . - . ID=g1840.t1.exon2;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 36172 36312 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 35826 36022 . - . ID=g1840.t1.exon3;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 35826 36022 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 35300 35462 . - . ID=g1840.t1.exon4;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 35300 35462 . - 0 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 34394 34882 . - . ID=g1840.t1.exon5;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 34394 34882 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 34068 34220 . - . ID=g1840.t1.exon6;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 34068 34220 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 33691 33846 . - . ID=g1840.t1.exon7;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 33691 33846 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 33428 33588 . - . ID=g1840.t1.exon8;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 33428 33588 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 33150 33294 . - . ID=g1840.t1.exon9;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 33150 33294 . - 0 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 32632 33051 . - . ID=g1840.t1.exon10;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 32632 33051 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 32235 32405 . - . ID=g1840.t1.exon11;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 32235 32405 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 31816 31915 . - . ID=g1840.t1.exon12;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 31816 31915 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 31595 31681 . - . ID=g1840.t1.exon13;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 31595 31681 . - 1 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 31342 31415 . - . ID=g1840.t1.exon14;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 31342 31415 . - 1 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 31043 31237 . - . ID=g1840.t1.exon15;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 31043 31237 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 30724 30876 . - . ID=g1840.t1.exon16;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 30724 30876 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 30353 30611 . - . ID=g1840.t1.exon17;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 30353 30611 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 29977 30168 . - . ID=g1840.t1.exon18;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 29977 30168 . - 1 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 29662 29806 . - . ID=g1840.t1.exon19;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 29662 29806 . - 1 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 29476 29576 . - . ID=g1840.t1.exon20;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 29476 29576 . - 0 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 29291 29337 . - . ID=g1840.t1.exon21;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 29291 29337 . - 1 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 29076 29174 . - . ID=g1840.t1.exon22;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 29076 29174 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 28761 28906 . - . ID=g1840.t1.exon23;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 28761 28906 . - 2 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . exon 28470 28625 . - . ID=g1840.t1.exon24;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . CDS 28572 28625 . - 0 ID=cds.g1840.t1;Parent=g1840.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 28470 28571 . - . ID=g1840.t1.utr3p1;Parent=g1840.t1 #PROT g1840.t1 g1840 MRVSAASIALVGVMLAFGTGAMSVTFPTFTSSFQVLILSQDPVITEAGVPNIFSSLAVDGCQRTTIKYFGSNRCVLVTDPTSITEAVATTYAQNANYQHIILVGFGYADVMTAVAPKFPTKTFSLIDSSVSPLPNYHGLLFAEDQAGFLAGVAAGLVTKVGTVGIVAGVPFPPLRRFRNGFGRGVNYVCPDCTVLATYAADFSNGTLGEVKAQAMVDKGADVIFGAAGGTGSAAIKYIAKKGLYVIGVDGDESKTTFFNNTDVKYILGSAIKRVDIAVEISLSERFEGKFVGGDKVLDATVLGVGLADCTNTSLAACQLMAEPVLVTNRQEGTDCAEVVRVPRKSWVQTTFDRMKDQVIQTKIDAGNGEFLARNGKTLDAWGQLIGFNDRPGKYAYMSASVLGSNVIGGFGGEVAGSVVNDLYLLDYDYLEWRKVSASGAWPAARRRHCTFVYNGKSHIFGGSLLGSATFYNDMWSLDGTSYAWTSITYSNAGPSQRTQHSCVVLGSDLYVFGGFTALLAVSSELWKYNMVSKVWTQLTPTGVTPPPIRDHIAVATGSSAFMVFGGQTSTAAINTLYSYNAGSNVWSVLLPEGVSPAPLYRAAAVALDSRRILITGGFNTTGPTYETFIYNIPKNRWVYTESKKLPTTLHSHAMVLVNQSSYAGACNYRDNIFPFPVSVCDPIARTSVLVIGGIDSKGATDTLYVMLPSGETADPVTSSSSANTGAIVGGAVGGGCGLLILLLVLFFVQRKRSLEAELRSMSWKIAAQDLEKGTFDKKGGSLAGSFVGSRATINSGASSLLGRQLFVTVAKWRNQMVAVKKIGKESIALTRPVLLELKSIKDTTHPNLVLFIGACVDVGEIQIVTEYCPKGSLEDILNNSSYKLDWLFKFSIATDVARGMAFLHSTEFGSHGHLKSSNCLVDSRWMCKIGDYGLHLFKADQKSNEEVTVHVKAQQQLWTAPEILRSSPGPAGTPKGDVFSFGIIMQEIITREYPYSESGLEVEDVLRNVGNGCDFRPVIPTESCSTEVAALTRRCWAENPTERPTFDEVERELRRINPDKATNVMDNMAKMLENYANHLESLVDARTAELEVEKKKTEELLYRMLPRAVAEDLRLGRKVNAESFDLVTIFFSDIVGFTDIASKSTPLQVVDFLNDLYTCFDSIIDSHDVYKVETIGDAYMVASGLPVRNENRHAGEIATMALDLLHATVGFTIRHLPSAFLQLRVGIHTGPCVSGVVGLKMPRYCLFGDTVNTASRMESGGLALRIHMSEATVTVLRQLGGYCIELRGTMAVKGKGDMTTYWLTGKDGWTKALPDLSNAASLSQHHFK* # PASA_UPDATE: g1838.t1, single gene model update, valid-1, status:[pasa:asmbl_8122,status:3], valid-1 NODE_54_length_49013_cov_42.3281 . gene 21429 23168 . + . ID=g1838;Name=g1838.t1 NODE_54_length_49013_cov_42.3281 . mRNA 21429 23168 . + . ID=g1838.t1;Parent=g1838;Name=g1838.t1 NODE_54_length_49013_cov_42.3281 . five_prime_UTR 21429 21533 . + . ID=g1838.t1.utr5p1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 21429 21633 . + . ID=g1838.t1.exon1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 21534 21633 . + 0 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 21758 21872 . + . ID=g1838.t1.exon2;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 21758 21872 . + 2 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 22060 22351 . + . ID=g1838.t1.exon3;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 22060 22351 . + 1 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 22471 22518 . + . ID=g1838.t1.exon4;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 22471 22518 . + 0 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 22661 22762 . + . ID=g1838.t1.exon5;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 22661 22762 . + 0 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . exon 23045 23168 . + . ID=g1838.t1.exon6;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . CDS 23045 23098 . + 0 ID=cds.g1838.t1;Parent=g1838.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 23099 23168 . + . ID=g1838.t1.utr3p1;Parent=g1838.t1 #PROT g1838.t1 g1838 MKLKELEGALQQLDAFKKPKVALEQYPTRPHIAARMLYAIEATYGDIANKLVGDFGCGCGMLSIGAALLGAGHVVGLDIDEDALEIAADNRCEMELDSEIDLVHCDVVAVESREEGASAQSATQTPSVSRAPAALRGMQFQFDTVLMNPPFGTKNNRGIDMAFLRAGIECASGAVYSLHKSSTREHIAKKASDWGVAMEVVAELRFDLPATYRFHKKASVDIEVDLLRFDCSRRTL* # PASA_UPDATE: g1837.t1, single gene model update, valid-1, status:[pasa:asmbl_8130,status:12], valid-1 NODE_54_length_49013_cov_42.3281 . gene 16348 20835 . - . ID=g1837;Name=g1837.t1 NODE_54_length_49013_cov_42.3281 . mRNA 16348 20835 . - . ID=g1837.t1;Parent=g1837;Name=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 18956 20835 . - . ID=g1837.t1.exon1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 18956 20835 . - 0 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 18506 18741 . - . ID=g1837.t1.exon2;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 18506 18741 . - 1 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 18176 18358 . - . ID=g1837.t1.exon3;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 18176 18358 . - 2 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 17486 18025 . - . ID=g1837.t1.exon4;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 17486 18025 . - 2 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 17076 17364 . - . ID=g1837.t1.exon5;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 17076 17364 . - 2 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . exon 16348 16944 . - . ID=g1837.t1.exon6;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . CDS 16353 16944 . - 1 ID=cds.g1837.t1;Parent=g1837.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 16348 16352 . - . ID=g1837.t1.utr3p1;Parent=g1837.t1 #PROT g1837.t1 g1837 MSWFSSAQLATLAKTAITQAQKTIDRALDIPAGELGHGGASGAIGASGISATLGTPGTLGAYGAYGGASGGLAGDAGAGGTLGILAPSSAWPMAVPQRGAYEPYRPPSSAAVAGGAQMQMQMQMQTETQTQTQQTPGGTLTPALTAAGPRDTGHLGAVDDGDATPIHPPTEPQALRLPSHSASTVGSSLEALGQGHLRGASAVVPAAASGGRQDTYAFFSAFVALSDTQTSENAARNEQNKRTPDESGAGTVATAAALDTCAPTSTETGAPPASSKRHKQLRRPGSQTGSVDSSPTSGGGGGPAAPASAHSSAGASPTGMRSPAASRAAGAAGEVASAIPGGNLGDDKSVGMRYLSRGASGELAGVGGGAFVTPGDGEAASQPRVHAGDGRRVTAAVSLMASDMPAGSAESGAVGAAHSVEAHSFGDVAGGLLTAAAVDVSREDDVEGWHDALDGTDGTGGVQLLATTNAHPSVPPLECLPATPCTLNTPSTVADHPSVPVTAAAGLPTDSPSRNDTDAPDANERPSSVDTPEALSAAAMSLSRAGNHAAPDCTESAASCPSPQLATAHVTADVHLGEGENAQNDSHAQEAAELARLRHVVAERERRLLELSKENMSLVESNAVLKGLVEKADEAGDRNGDHVRALKELTARLLSAEQRLQSAVRERDALRADGERMTAEWAEQARRANEQLSERDATIAQLMAEGEKLSRKELGYANALKKLKAKNNEAEEELVSLRTRATESDERCEKLRAEVKEKDARDKKSLESLKTLSDKSESLAKEVTLLRKEKDSMQAALVTARAAVEAAEHELVELRRRTDSTESAVQGAALAAGLTAREEMSAVLERTRSDHARECEALVAQIHGLRESVSRADAQAARREEMLRAEIADLRERLAHAESRNDELASNVSLATRPLLRQMESLRQAHADQQSAWERMESALSARLDEAQHVAASAAEKERSAVERAMDASARLSAVEAALGAERTEKVALVAELSAMRQAADAAKEGALREIARGDAMRTAHARTQEEMRREIAALEIRLSEERDEHENEKRRVNLLKSEVERLRTAVASIPSDRGETTSNGVMKEAAHSRLLSQEEILQESLGIAGDTKERGRGRAVSGGPEGSSAILMERYQTMLRQRDGEILALQSRLGELESGRATLANEVVALAAENESFKTLVGDVVSLREEHVQLEDRYNAILQMYGEAEERISELTLDLHDVKTMYRAQIEDLVSQIGSVSH* # ORIGINAL: g1833.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 4737 7740 . - . ID=g1833;Name=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 4737 7740 . - . ID=g1833.t1;Parent=g1833;Name=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 7677 7740 . - . ID=g1833.t1.exon1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 7677 7740 . - 0 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 7440 7502 . - . ID=g1833.t1.exon2;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 7440 7502 . - 2 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 7269 7342 . - . ID=g1833.t1.exon3;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 7269 7342 . - 2 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 6784 7008 . - . ID=g1833.t1.exon4;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 6784 7008 . - 0 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 6355 6413 . - . ID=g1833.t1.exon5;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 6355 6413 . - 0 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 6038 6130 . - . ID=g1833.t1.exon6;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 6038 6130 . - 1 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 5838 5914 . - . ID=g1833.t1.exon7;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 5838 5914 . - 1 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 5408 5480 . - . ID=g1833.t1.exon8;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 5408 5480 . - 2 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 5066 5160 . - . ID=g1833.t1.exon9;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 5066 5160 . - 1 ID=cds.g1833.t1;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 4737 4849 . - . ID=g1833.t1.exon10;Parent=g1833.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 4737 4849 . - 2 ID=cds.g1833.t1;Parent=g1833.t1 #PROT g1833.t1 g1833 MERPTLLRIKRRLDEDALDVVVLHQSKIRRESTDGPGATDKPDKLFRLVGTLPVALARDKACAEDLLVQVNGARIDDAAAATAAQAEAQAHAHVDGAVDHAARDDTVGHGSARAVGAVARRDPKAVPRTDDERRAFLAEQAKKTSKNARFRLVNSYRFGKGRTAAPDDENDEMARAFDLYDLERSVRDETERRAPRVSAKDALMCNLIPMVRESLSVRDRQQDFVYDVYYLEERADAIDTYESIPVVAFDEDLVLEHEYDDEDDVYGDDDDDSNDENNWRNDYPDEDEWRDGDETDTTATDEYNKSSDDDE* # PASA_UPDATE: g1843.t1, single gene model update, valid-1, status:[pasa:asmbl_8123,status:3], valid-1 NODE_54_length_49013_cov_42.3281 . gene 42376 43771 . + . ID=g1843;Name=g1843.t1 NODE_54_length_49013_cov_42.3281 . mRNA 42376 43771 . + . ID=g1843.t1;Parent=g1843;Name=g1843.t1 NODE_54_length_49013_cov_42.3281 . five_prime_UTR 42376 42566 . + . ID=g1843.t1.utr5p1;Parent=g1843.t1 NODE_54_length_49013_cov_42.3281 . exon 42376 42680 . + . ID=g1843.t1.exon1;Parent=g1843.t1 NODE_54_length_49013_cov_42.3281 . CDS 42567 42680 . + 0 ID=cds.g1843.t1;Parent=g1843.t1 NODE_54_length_49013_cov_42.3281 . exon 43018 43771 . + . ID=g1843.t1.exon2;Parent=g1843.t1 NODE_54_length_49013_cov_42.3281 . CDS 43018 43494 . + 0 ID=cds.g1843.t1;Parent=g1843.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 43495 43771 . + . ID=g1843.t1.utr3p1;Parent=g1843.t1 #PROT g1843.t1 g1843 MDEERDLEDVVERFCAAIESVDVEKRDLMKRETADLLMVLGMAGYANDVALDIATQLIECEVTALSIRELTFASEFMLEKEVTHFEKPEHVLKMSIRDAKQAGKSVEDAIIERLTVLRSKRTSVSPNTARRIIQGFEQARAKTAIKESIGRRKKAFQQRMSLFNKTAEAVESVEQKSGQSSRPKLDNMFLREDQDN* # PASA_UPDATE: g1844.t1, single gene model update, valid-1, status:[pasa:asmbl_8134,status:12], valid-1 NODE_54_length_49013_cov_42.3281 . gene 43971 48775 . - . ID=g1844;Name=g1844.t1 NODE_54_length_49013_cov_42.3281 . mRNA 43971 48775 . - . ID=g1844.t1;Parent=g1844;Name=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 48659 48775 . - . ID=g1844.t1.exon1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 48659 48775 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 48262 48475 . - . ID=g1844.t1.exon2;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 48262 48475 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 47912 48003 . - . ID=g1844.t1.exon3;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 47912 48003 . - 2 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 46993 47628 . - . ID=g1844.t1.exon4;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 46993 47628 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 46453 46677 . - . ID=g1844.t1.exon5;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 46453 46677 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 46076 46219 . - . ID=g1844.t1.exon6;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 46076 46219 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 45829 45898 . - . ID=g1844.t1.exon7;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 45829 45898 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 45543 45687 . - . ID=g1844.t1.exon8;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 45543 45687 . - 2 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 45165 45384 . - . ID=g1844.t1.exon9;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 45165 45384 . - 1 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 44735 44857 . - . ID=g1844.t1.exon10;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 44735 44857 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 44532 44570 . - . ID=g1844.t1.exon11;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 44532 44570 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . exon 43971 44389 . - . ID=g1844.t1.exon12;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . CDS 44177 44389 . - 0 ID=cds.g1844.t1;Parent=g1844.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 43971 44176 . - . ID=g1844.t1.utr3p1;Parent=g1844.t1 #PROT g1844.t1 g1844 MVKRMRVMRPILRAAIASRDLAKLEKALEDAGDISFEMKDTTEAKKLRDLIVEEKRVTAVLQGLDGKDADKCFDAFVDAVAQADKIELKSDIAAKIRKQLSEVKERREIAANLKAGCDTWDIEMLKGALDRATKIKLETPDVTKGREAVKRIEGENAIVAEIETTFKSGYLVQRSDYDAINTGPLSAAIEKAKKYVFNTAAGKTALAKAEVIKDIRTAMKAEDWNALEKALLKGSQLALDSEEIKCARAELTFKAAVDVVVAKLVDAIAAFDEDSLRLELEKAAALNMAEMPDHADLIARATDLLESIRGAREWLAAATANVDEEQLVYAVELCESFGYETAEVAKARTLRDEVIRLKALAKHGLAMLDRPTLEEALTGSDAIALKTDDVEQMRTLLHNTPEEKFLQMQLKIAVGMNDSSRITKVTIQMKDIFFQRYGTDYFKLENYGHLRTRAMYANAKMFGREELKLNMLIHTKKSIPTSLLRLEGPHVQTACKMFKNLLGWMGDKQYAYPTMLAQEIVNTALETPELRDEIYCQIIKQLTRNPSPDSEMKGWQMMQIGVQTFPPTDDFSNYLEIFLRGNARPTQNATAEDFVPWLHETLYGGAKHGAQVEQIIQRTRKNTVAQTPSAAAVSSSHAPRNSAPKNPQIVQQQQQQARQPPAPQQAQQPQQQAQKPARRQSHVQAPTLRYPQARALYDYDAQDEGIMSLVAGDIINVHDREGGDWWFGEINGQTGFFPSSFVELV* # PASA_UPDATE: g1836.t1, single gene model update, valid-1, status:[pasa:asmbl_8120,status:12], valid-1 NODE_54_length_49013_cov_42.3281 . gene 14838 16085 . + . ID=g1836;Name=g1836.t1 NODE_54_length_49013_cov_42.3281 . mRNA 14838 16085 . + . ID=g1836.t1;Parent=g1836;Name=g1836.t1 NODE_54_length_49013_cov_42.3281 . five_prime_UTR 14838 14845 . + . ID=g1836.t1.utr5p1;Parent=g1836.t1 NODE_54_length_49013_cov_42.3281 . exon 14838 15624 . + . ID=g1836.t1.exon1;Parent=g1836.t1 NODE_54_length_49013_cov_42.3281 . CDS 14846 15624 . + 0 ID=cds.g1836.t1;Parent=g1836.t1 NODE_54_length_49013_cov_42.3281 . exon 15742 16085 . + . ID=g1836.t1.exon2;Parent=g1836.t1 NODE_54_length_49013_cov_42.3281 . CDS 15742 16039 . + 1 ID=cds.g1836.t1;Parent=g1836.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 16040 16085 . + . ID=g1836.t1.utr3p1;Parent=g1836.t1 #PROT g1836.t1 g1836 MTSLADELVAAEAHLIRLLVGCEGGPPHRQAVVEFDALSKQRRLSGCQDIVAVSKHSSQSDSRSQNRDWEIPRSEIELSPGRNVLGEGGFGAVTVGVWRGRAVAVKEMRTPYKSAADLADFVSEVSVLRGLSHPNIVRMHGACVHPPHVLVVLELMHGGTLFHALRSKQLGMRSQQRLEIARDIAAGMAYLHGLNPPILHRDLKSLNILLSSGGSVSARVSDFGLSCVGREALCAGGTVNWMSPEALRGEIFTQKSDVYSYSMVLFEIFSGEVPFSTMRSEDIVGNVSSRRMRPDIPRMPPTARSLMIKSWHQEPLLRPSFVEILGRLEVVLAGDIHSRTQAALLPKRKTTVFEKRRN* # PASA_UPDATE: g1832.t1, single gene model update, valid-1, status:[pasa:asmbl_8124,status:12],[pasa:asmbl_8129,status:12], valid-1 NODE_54_length_49013_cov_42.3281 . gene 220 3953 . - . ID=g1832;Name=g1832.t1 NODE_54_length_49013_cov_42.3281 . mRNA 220 3953 . - . ID=g1832.t1;Parent=g1832;Name=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 3783 3953 . - . ID=g1832.t1.exon1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 3783 3953 . - 0 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 3434 3542 . - . ID=g1832.t1.exon2;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 3434 3542 . - 0 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 2762 3214 . - . ID=g1832.t1.exon3;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 2762 3214 . - 2 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 2540 2619 . - . ID=g1832.t1.exon4;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 2540 2619 . - 2 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 2296 2332 . - . ID=g1832.t1.exon5;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 2296 2332 . - 0 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 1920 2121 . - . ID=g1832.t1.exon6;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 1920 2121 . - 2 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 1403 1547 . - . ID=g1832.t1.exon7;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 1403 1547 . - 1 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . exon 220 923 . - . ID=g1832.t1.exon8;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . CDS 339 923 . - 0 ID=cds.g1832.t1;Parent=g1832.t1 NODE_54_length_49013_cov_42.3281 . three_prime_UTR 220 338 . - . ID=g1832.t1.utr3p1;Parent=g1832.t1 #PROT g1832.t1 g1832 MDATGDRAGLSAPAAVAALGVCADAQALFGSHDDEDDALINSGSDSEGGLDAAGDARRRLVNPTPDEYERLLAALTCRLQEGHGETLYELGIGESSRGLSKEELAASKETLVGLAEKAGADATLLRERHDDGMTVAEYLVRRRPSEDAADFLEIRVAVVGNVDAGKSTLLGVLTHNQLDNGRGLSRANLFRHKHEAETGRTSSVGHDILGFDSRGRPVNAPDAHTGSLDWTEICMAASKVINFIDLAGHEKYLKTTVFGLTGHVPDFAMLMVGANNGVIGMTKEHLGLALALNVPVFVVVTKIDMCPPNVFKETMSLLTKILKSPGCRKIPLVVSNSDDAVVTATNFVSERICPIFQVSNVTGESLDLLRLFLNLLTTRTESHASEPAHFQIDETFAVPGVGTVVSGTLLRGIVHPNDTLLLGPDALGQFQPVVIKSIHRKRTPVKLVRGGQAASFALKKIKRSAVRRGMVLAARDAHPVACREFEADVLVLHHPTTMGGRYQAMVHCGSVRQTAAIQLTDREHMRTGDKAPVRFRLVRNPECILVGSRIVFREGRTKAVGTVTRVFDINSTPAAVAKTDAQRQAPKNRTVSI* # ORIGINAL: g1841.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 37640 38975 . - . ID=g1841;Name=g1841.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 37640 38975 . - . ID=g1841.t1;Parent=g1841;Name=g1841.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 38824 38975 . - . ID=g1841.t1.exon1;Parent=g1841.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 38824 38975 . - 0 ID=cds.g1841.t1;Parent=g1841.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 37640 37844 . - . ID=g1841.t1.exon2;Parent=g1841.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 37640 37844 . - 1 ID=cds.g1841.t1;Parent=g1841.t1 #PROT g1841.t1 g1841 MDSAADPDLTIYGTERKRPSWMHRASDPADEPTMPLSQQWPPEWGPPPAASQQSATGSAAAPGGMRLNSAAVAGGGGELQMDQVEWAGVDSTPAALDAGRGTESDAGDGQDSGLLMMI* # ORIGINAL: g1834.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 8129 11449 . + . ID=g1834;Name=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 8129 11449 . + . ID=g1834.t1;Parent=g1834;Name=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 8129 8390 . + . ID=g1834.t1.exon1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 8129 8390 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 8639 8664 . + . ID=g1834.t1.exon2;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 8639 8664 . + 2 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 9167 9235 . + . ID=g1834.t1.exon3;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 9167 9235 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 9460 9606 . + . ID=g1834.t1.exon4;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 9460 9606 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 9866 10096 . + . ID=g1834.t1.exon5;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 9866 10096 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 10232 10345 . + . ID=g1834.t1.exon6;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 10232 10345 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 10530 10647 . + . ID=g1834.t1.exon7;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 10530 10647 . + 0 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 10822 10959 . + . ID=g1834.t1.exon8;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 10822 10959 . + 2 ID=cds.g1834.t1;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 11286 11449 . + . ID=g1834.t1.exon9;Parent=g1834.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 11286 11449 . + 2 ID=cds.g1834.t1;Parent=g1834.t1 #PROT g1834.t1 g1834 MASTHKHTFRLRIRRASQLVTVCSGREAFKTGADMRSIGVIEDGTVVVGHDGLVHAAGREDDLLQLEWYRTATFETDVDGAGKSVVPGLIDGHTHPFAMKIAGATYMDIHKQGGGIGFTVRHTRESSEEELRQSLRARLDRMLRCGTTLVEAKSGYGLECCTEIKMLKVIHDVAKEHSVDVVSTFLGAHSVPQGTTAREYAAEVVREQIPAVVAATARGEISPSNIDVFYEKGVFEGEETRRIFEAGKAAGLSINFHGDELNPMGAGELGAEVGALAISHLEEVSDAGIAAMAEKKIFGVLLPTTAYVLRINPPPARKLIDAGVPVCLGSDFNPNAHCLSMPFVMNLACVNMRLTMEEALVAATINCAASLQKSDMHGSIEIGKYGNLVVIDSPRWEHLVYELVDPPIGCVIVRGRIVHRRS* # ORIGINAL: g1835.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 11702 13995 . - . ID=g1835;Name=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 11702 13995 . - . ID=g1835.t1;Parent=g1835;Name=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 13777 13995 . - . ID=g1835.t1.exon1;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 13777 13995 . - 0 ID=cds.g1835.t1;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 13503 13671 . - . ID=g1835.t1.exon2;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 13503 13671 . - 0 ID=cds.g1835.t1;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 12460 13383 . - . ID=g1835.t1.exon3;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 12460 13383 . - 2 ID=cds.g1835.t1;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 11702 12198 . - . ID=g1835.t1.exon4;Parent=g1835.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 11702 12198 . - 2 ID=cds.g1835.t1;Parent=g1835.t1 #PROT g1835.t1 g1835 MGEETGKSRPASTRTSNANLAVQSGPAFAPDESHIAEDHVRGEAADVVHPTMEESSSLGGDVGRSEGHTAARRRSSVAIPAAIPVPDTRPAVTDPRRMRRVIAEDPEWNIALVPRLVDLCVSHIVANFTKNPLLAELPPKYRTKVLEQLSTDIPLATTAPLIAHEGYWKRCCAARWKINDVSPHGNSWKQAFFERNLEEYIEKIVPNRLDSNDLARLLRLSANFVSRLDIKQLLPPAKEKDGKDFGARSAQAHHAHATQGSPAAQQQQGAASSSKGVGAAGGGRGGSGQTAGSGGLQVPSQGGRGAAAGGGGVTVATSSLSIASVGAEISENEDDNDSDGDADGRGPQQDHVNLSVAIEALPQLRELNLTYGVRHCGMNFDWSLFGMTIRDCQVLARTFKAKASALTTLRLYRSSIDDSRARILISHLLDHPALSVLDLSHNKIGDSGARAVAKLLKGHSKLSTLDLCDNQIQRSGGNSIGRSLEFNSTLVSLNLRLNRLGDAGGRALLDGLMRNVTLKSLNIGSNSLGLETATALGNVLRHNTSLEELDLTSNKFGADGGKLVQDGASGNRRIRRMDVRLTEIGQENEYCIAEILKANIER* # ORIGINAL: g1842.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 40257 42068 . - . ID=g1842;Name=g1842.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 40257 42068 . - . ID=g1842.t1;Parent=g1842;Name=g1842.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 40257 42068 . - . ID=g1842.t1.exon1;Parent=g1842.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 40257 42068 . - 0 ID=cds.g1842.t1;Parent=g1842.t1 #PROT g1842.t1 g1842 MPGPIGGVNVGIRALLFAHHFRAALPCPAARTAACASSRARLIPSPSRVGKAASPVSVAPSLTLCASALRPTAHSASAAAAGTAQPHRGACAPSVTRCFGVPLVVAHDAFRRPLHLASSIPSVVLHRAGNGQTCHSRRWMHGSSGSGCMVSRHASQQRLHRADDQRARLWCLRQEGAATATRVRHPPACFQLVRPSHRSHWAPVRCMHSQPPRKTQPHSITDRSGAHSQSGPADTSISMNYWPMDVAAIVRPAHSHVRRKAPTYFSPTTGSAGHVHLVSSAASGTAGSAGASTGGWMSRLSLGGWGAVVIGNLAYGLSIFEYSVTDMLTLRTFSLLGCVLTCAYMLMQKPTLYIPVAWNALFIAILGAQIIILLRDRRTIHFNEEEALLYARSFKDFSFTPSQFQELLRVGSWLTLRPGDVLTREGEPNTYVVLVSSGECGVIVNGRRVAGLSAGNFVGEIAFMSGLPATATVVAETPVRCYAWSNERLEKLFDDVGEMRQVFRDRLASDLINKFTRKNEAMSAALTQTNYGQLLSAALRPSDGGHCADVDARQREVLAVYRRLHDVAEDDHWQLVAANGWTRDEYERGRKAPANGTPQIHGG* # ORIGINAL: g1839.t1 original gene structure, not modified by PASA NODE_54_length_49013_cov_42.3281 AUGUSTUS gene 23230 27906 . - . ID=g1839;Name=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS mRNA 23230 27906 . - . ID=g1839.t1;Parent=g1839;Name=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 27867 27906 . - . ID=g1839.t1.exon1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 27867 27906 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 27524 27741 . - . ID=g1839.t1.exon2;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 27524 27741 . - 2 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 27190 27345 . - . ID=g1839.t1.exon3;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 27190 27345 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 26782 26910 . - . ID=g1839.t1.exon4;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 26782 26910 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 26278 26478 . - . ID=g1839.t1.exon5;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 26278 26478 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 25977 26135 . - . ID=g1839.t1.exon6;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 25977 26135 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 25736 25867 . - . ID=g1839.t1.exon7;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 25736 25867 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 25282 25500 . - . ID=g1839.t1.exon8;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 25282 25500 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 24889 25011 . - . ID=g1839.t1.exon9;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 24889 25011 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 24538 24707 . - . ID=g1839.t1.exon10;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 24538 24707 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 24169 24367 . - . ID=g1839.t1.exon11;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 24169 24367 . - 1 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 23874 24067 . - . ID=g1839.t1.exon12;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 23874 24067 . - 0 ID=cds.g1839.t1;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS exon 23230 23707 . - . ID=g1839.t1.exon13;Parent=g1839.t1 NODE_54_length_49013_cov_42.3281 AUGUSTUS CDS 23230 23707 . - 1 ID=cds.g1839.t1;Parent=g1839.t1 #PROT g1839.t1 g1839 MHVPPDSPLPQAPDAAIGKLYVVKRDGRKETVYFDKITTRISNLMTGLDPEYVDAAVIAQKIVAGVYPGVTTQELDTLAAETCAYMTCNHPDYAILAARIAVSNLHKATKASFSAVVEDLYLYVNPQTGKHAPLVAEELRNYVAANAEWIDAAVVHERDFDYQYFGFKTLEKSYLLRLEGRIVERPQHMLMRVAAAIHIGNKDRILETYTLLSERWFTHATPTLFNAGSTMPQMSSCFLVQVADDSIEGIYETLKTCALISKSSGGIGINVHNIRASGTYIAGTNGTSNGLIPMLRNFDATARFVTQGGGKRNGSIAVYLEPWHPDVFEFIELRKNTGKDENRARDLFLALWVPDMFMRRVETNGEWSMFCPHECPGLSDCFGAAFDALYLRYEAEGRARKTVPAQKLWHAIVEAQMETGTPYLLYKDACNDKSNQKNLGTIKCSNLCTEIIEYTSPDEVAVCNLASIALPKFVRENGEFDHQKLFDVTRVVTRNLNRIIDINHYPVPQARKSNFRHRPIGLGVQGLADAFILMRLPFDSDAAQKLNRDIFETIYFAALTSSNELARLDGAYDSYEGSPVSKGILQHDMWGVAASDRWDWATLRARIAECGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNQHLLLDLTRRGLWTDAMKNKIIAANGSIQGIPEIPADLKALYKTVWELSQRRIIDLAADRGAFVDQSQSLNLHVSDATYAKLSSMHFYGWKRGLKTGMYYLRTRAAVDAIKFTVDAAAIKEAALAGAQAQGQGDVAAGGAETTRRRTF* # ORIGINAL: g13246.t1 original gene structure, not modified by PASA NODE_2394_length_6428_cov_43.9147 AUGUSTUS gene 182 4282 . - . ID=g13246;Name=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS mRNA 182 4282 . - . ID=g13246.t1;Parent=g13246;Name=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 4108 4282 . - . ID=g13246.t1.exon1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 4108 4282 . - 0 ID=cds.g13246.t1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 3909 3993 . - . ID=g13246.t1.exon2;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 3909 3993 . - 2 ID=cds.g13246.t1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 3107 3617 . - . ID=g13246.t1.exon3;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 3107 3617 . - 1 ID=cds.g13246.t1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 2621 2848 . - . ID=g13246.t1.exon4;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 2621 2848 . - 0 ID=cds.g13246.t1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 1064 2314 . - . ID=g13246.t1.exon5;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 1064 2314 . - 0 ID=cds.g13246.t1;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 182 863 . - . ID=g13246.t1.exon6;Parent=g13246.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 182 863 . - 0 ID=cds.g13246.t1;Parent=g13246.t1 #PROT g13246.t1 g13246 MPQYNAFALGARTVMMHFPTSVASSARISCVVGARQMHSTVRPPRPLKKLLVANRGEIAVRIMRAANELGIKTVAIYSHEDAKSMHRQKADESYLVRGPTPVGAYLNIPEIIDVARHHDVDGIHPGYGFLSESAPFARACKDAGVTFIGPTPDVVENMGDKTIARRLAQECNIPVVPGTDNAITTTNEARTFCEQHGFPVILKAAFGGGGRGMRVVREMKELEENFERATSEAKAAFGNGAMFIEKFVDRPRHIEVQILGDTTGDVVHLFERDCSVQRRHQKVVEIAPAPFFDAGLRDRLTADAVKLARHVGYRNAGTVEFLVSSTGEYYFIEVNPRLQVEHTVTEEVTGVDLVQSQIRIAEGASLKSLNLHQENITLRGCAIQCRVTAEDPEKDFRPDIGRLEVFRTGEGMGIRLDGGPAFPGALISPHYDSLLVKVTGKGMSHQQAATKLTRALGEFRIRGVKTNIPFLLNVLKHKAFLEGSITTRFIDSTPELFSFLDSRNRAQKLLQYLANVAVNGPQTPLGTDQKPSKMIARVPETPKGAIPTGWRKILKEQGPKAFAKAVREHKGVLVTDTTMRDAHQSLLATRVRTTDLARIAPYTAHALAPAYSLENWGGATFDVALNFLRECPWDRLAQLRELVPNIPFQMLLRGANAVGYKSYPDNVVFKYCDLAVRHGMDVFRVFDSLNYMPNLKLGIDAVGAAGGVVEGAMCYTGDVLNPRKGKYNMDYYLDLARQLIDSGVHVLCIKDMAGLLKPDAATALVGALRKEFPHMPIHMHTHDTAGNGVAAMIAAARAGADAVDLAVDSMSGMTSQPSMGAFVAAVEQTPLNTGIALDSVSAMSTYWEEARGAYAPFECTTTMKSGSSDVYRHEIPGGQYTNLHFQAYSMGLADQWPEIKRVYELANLMLGDIVKVTPTSKVVGDLAQFMVSNGIRDEQTLLEKADMLSFPGSVVEFFQGYLGHPHGGFPEPLRTKV # ORIGINAL: g13247.t1 original gene structure, not modified by PASA NODE_2394_length_6428_cov_43.9147 AUGUSTUS gene 5532 6099 . + . ID=g13247;Name=g13247.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS mRNA 5532 6099 . + . ID=g13247.t1;Parent=g13247;Name=g13247.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 5532 5648 . + . ID=g13247.t1.exon1;Parent=g13247.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 5532 5648 . + 0 ID=cds.g13247.t1;Parent=g13247.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS exon 5770 6099 . + . ID=g13247.t1.exon2;Parent=g13247.t1 NODE_2394_length_6428_cov_43.9147 AUGUSTUS CDS 5770 6099 . + 0 ID=cds.g13247.t1;Parent=g13247.t1 #PROT g13247.t1 g13247 MSTSPSATGHGVRAPVSTFALQASLPSLPVPALEQTASKFLDSVRPLCDDTEYARVKASVADFVGGVGRDLQARLEAKAAKSDNWLDDYWEDLAYLIWRDALVPQETMLLADDPLGRKLSQTERLASVIAGMIEFKSELDTEALEPDM* # ORIGINAL: g3078.t1 original gene structure, not modified by PASA NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS gene 662 1087 . - . ID=g3078;Name=g3078.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS mRNA 662 1087 . - . ID=g3078.t1;Parent=g3078;Name=g3078.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS exon 662 1087 . - . ID=g3078.t1.exon1;Parent=g3078.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS CDS 662 1087 . - 0 ID=cds.g3078.t1;Parent=g3078.t1 #PROT g3078.t1 g3078 MYEFAALTMADRMHMAQLRLSRKIVGMEKSRITHRACTTYLRRRPSARLSTVNTEASEFKAAAGAVDAALTPEVRSRSAAAQKRAAKQALVSRRSILAKKAVVEQAALRSLGVNVDREEWGPRPYLLQAPATAATTAFNLE* # ORIGINAL: g3077.t1 original gene structure, not modified by PASA NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS gene 154 464 . - . ID=g3077;Name=g3077.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS mRNA 154 464 . - . ID=g3077.t1;Parent=g3077;Name=g3077.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS exon 154 464 . - . ID=g3077.t1.exon1;Parent=g3077.t1 NODE_4246_length_1941_cov_80.4539_potentialcontaminant AUGUSTUS CDS 154 464 . - 0 ID=cds.g3077.t1;Parent=g3077.t1 #PROT g3077.t1 g3077 MSHFFAANLLKAVAHGEAQGSTPSPTRPLQAMWRARALALEERRLANEDEPDSDGDDEGLATPAAPVQVSAVHSSSITPPLFDSPPHFSPCGAGGGVGTTAWF # PASA_UPDATE: g12118.t1, single gene model update, valid-1, status:[pasa:asmbl_6900,status:12], valid-1 NODE_4047_length_2284_cov_28.1299 . gene 245 1719 . + . ID=g12118;Name=g12118.t1 NODE_4047_length_2284_cov_28.1299 . mRNA 245 1719 . + . ID=g12118.t1;Parent=g12118;Name=g12118.t1 NODE_4047_length_2284_cov_28.1299 . exon 245 409 . + . ID=g12118.t1.exon1;Parent=g12118.t1 NODE_4047_length_2284_cov_28.1299 . CDS 245 409 . + 0 ID=cds.g12118.t1;Parent=g12118.t1;5_prime_partial=true NODE_4047_length_2284_cov_28.1299 . exon 850 967 . + . ID=g12118.t1.exon2;Parent=g12118.t1 NODE_4047_length_2284_cov_28.1299 . CDS 850 967 . + 0 ID=cds.g12118.t1;Parent=g12118.t1 NODE_4047_length_2284_cov_28.1299 . exon 1188 1719 . + . ID=g12118.t1.exon3;Parent=g12118.t1 NODE_4047_length_2284_cov_28.1299 . CDS 1188 1333 . + 2 ID=cds.g12118.t1;Parent=g12118.t1 NODE_4047_length_2284_cov_28.1299 . three_prime_UTR 1334 1719 . + . ID=g12118.t1.utr3p1;Parent=g12118.t1 #PROT g12118.t1 g12118 GETWNPMRLKYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPVVDAGSKDKVLKKVQDAVLARWVNDVTRIDKRTLALIFLAHASDVLENAFSPLSDDDYDLAMKRLKELLDLDPDTESMRNPAQEVLWAVVYAFNQR* # ORIGINAL: g14228.t1 original gene structure, not modified by PASA NODE_392_length_24944_cov_41.997 AUGUSTUS gene 7030 13054 . - . ID=g14228;Name=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS mRNA 7030 13054 . - . ID=g14228.t1;Parent=g14228;Name=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 12299 13054 . - . ID=g14228.t1.exon1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 12299 13054 . - 0 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 11927 12149 . - . ID=g14228.t1.exon2;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 11927 12149 . - 0 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 11209 11729 . - . ID=g14228.t1.exon3;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 11209 11729 . - 2 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 10652 10905 . - . ID=g14228.t1.exon4;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 10652 10905 . - 0 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 10304 10430 . - . ID=g14228.t1.exon5;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 10304 10430 . - 1 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 9818 10002 . - . ID=g14228.t1.exon6;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 9818 10002 . - 0 ID=cds.g14228.t1;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 7030 9670 . - . ID=g14228.t1.exon7;Parent=g14228.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 7030 9670 . - 1 ID=cds.g14228.t1;Parent=g14228.t1 #PROT g14228.t1 g14228 MTNDMHPQPERRPSVGSAAPGPTNPLVQAHERGSIASLFGVAKSAMTFKSATATQRTPVPSTPVRGGTGDPGGAAAPVTPVPQSAGRPSTTPSAAATPATAAVATGAGTPAVNVDEVETLLAVPHGELRRRTTPGLSANTAESPRLSPAGQRFKAAAQAVTAVHRLSFMATLRRLWMLALKRTLMVEDFDVAMVFRGEAKDASMREYARRRLVDVGLSVDVSNSKDGSEVFFKLRAAYGVLITTAESMQLKKAIVSDAFRVAPLGSVPITQFRGYEKPETFFNSLDRQRIVMHLVESIEGRKGDTFVCNGVGITAGESLVAKLKTAGVIVRLFGLHDDQTRDHLLKTWAGSFRVQPLDKIKDYFGHEIAFYFAWLGFYTGWLIAPVLMGLFVFWGQMAGGSADNPHVLVYSVFISVWATIFLEYWKRHSSVLSFKWDVMDFEESEIDRPAFKGSMRQSPVTGELEKYYPRGRRFLKYIGSGTCMAVMLAAALALMLSKFKLQEYVEQHYGGMLANGVTIAYALMIPHINRLCCAVATRLNDWENHRTDSDHQAGLVLKRVVLELPNYYSSLFYAAFVLQDMDLLRSQLATLLVTMQIVGNIKEVVIPRLCEMYAIHKAGGEGRPIPQIECENTLEEYESTFEDYLEMIVQFGYVTLFAAAFPLAPLCAFVNNVIEIRSDAFKLCANSQRPFGRDAGGIGIWLHVLSFMSKAAVITNAAVVAFTSRQALSSFEFTPFTRLIIIVTAEHLVVWLKNVFEIAIPDLPEWVENMIARRKYLDRKAAEEARRSHEDTESRASEHVRGLAQMPTQQGQAGVGGTPPLAREPSHRGDDTPTRHLVRSNANSSESSPQAQRKADLLAAPALLGTPGHNGRRRMSNVAVAASSAAAAQAAAASSSSASSASPVIVTSPPVIYESDLPEFLHDFFPHIAAGMGAAFALGALGFHFMWLPWAYFCIAAIENRQRKWVARRAELNACRRLHPNVALPSSRPAGLPDDADTARWLNGLIRKVWITYGGDAAKVIVATVEPMLEQYRPSFVSSIRLERFDLGRKPPEFNGFRLHPGAEDDEAVLDVDFKFETELEAVLGIHVGVVNCPIALREVEVSGRLRVRVKLVREPPFISTLGIAFYEAPKIDFVIKPLKAVDLMEMPGVAGFLDHFLNVTLAGMMVLPAELVVPLTNEAPEPKLLRITLVRGTNLAVRDIGGTSDPYVVMRVGDKKFRSAVVERSLNPVWNQQFECRVDNAQGARLELEVWDEDMVKDESMGRCTVQLSGLQEGFRRSLWLDLENVECGQINVVLALLPLDGQEAMPGTLHAVVREVRGLHVPDRCESVVCAVRVGSGKVWTEDMRTNPRDPLDLCWNERLSLPVRYPKRERLVIGVCDEDAPGTPIATCEVILDDLVEVGSRDYWAALVPADAKGKGPVGGESPMARLELSFVAEEGGGGVVLQEPERHVVQMVLVEARGLQSPRAVSKYVSVRLGNDRWTSRQAKGTNSAGMPVWNDTRDFVADDLLTQRLTMTLVEDGLLKDKDLGKCAVPLASLVKGRLNDLWVPLDEPGVGEIRLQISLLKV* # PASA_UPDATE: g14233.t1, single gene model update, valid-1, status:[pasa:asmbl_6736,status:12], valid-1 NODE_392_length_24944_cov_41.997 . gene 23767 24864 . + . ID=g14233;Name=g14233.t1 NODE_392_length_24944_cov_41.997 . mRNA 23767 24864 . + . ID=g14233.t1;Parent=g14233;Name=g14233.t1 NODE_392_length_24944_cov_41.997 . five_prime_UTR 23767 23782 . + . ID=g14233.t1.utr5p1;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . exon 23767 23914 . + . ID=g14233.t1.exon1;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . CDS 23783 23914 . + 0 ID=cds.g14233.t1;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . exon 24062 24196 . + . ID=g14233.t1.exon2;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . CDS 24062 24196 . + 0 ID=cds.g14233.t1;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . exon 24363 24470 . + . ID=g14233.t1.exon3;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . CDS 24363 24470 . + 0 ID=cds.g14233.t1;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . exon 24696 24864 . + . ID=g14233.t1.exon4;Parent=g14233.t1 NODE_392_length_24944_cov_41.997 . CDS 24696 24864 . + 0 ID=cds.g14233.t1;Parent=g14233.t1;3_prime_partial=true #PROT g14233.t1 g14233 MSIDWRRRSVMFKMLGKFALGAILAMVALSVSAAGDLVAQPPEQVHLALGGAGEMVVSWVTQDTTVDSVVQYGTNEENLDASVAGHHYEFADGGLLKRKITIHNAKMTGLSSNQRYYYRVGSTDQGWSEVFSFRTFPDGKPQLDIAVFGDFGVVNSRSLVSLQDEAYRGTIDMVIHAGDFA # ORIGINAL: g14229.t1 original gene structure, not modified by PASA NODE_392_length_24944_cov_41.997 AUGUSTUS gene 13654 15376 . - . ID=g14229;Name=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS mRNA 13654 15376 . - . ID=g14229.t1;Parent=g14229;Name=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 15341 15376 . - . ID=g14229.t1.exon1;Parent=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 15341 15376 . - 0 ID=cds.g14229.t1;Parent=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 14179 15206 . - . ID=g14229.t1.exon2;Parent=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 14179 15206 . - 0 ID=cds.g14229.t1;Parent=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 13654 13951 . - . ID=g14229.t1.exon3;Parent=g14229.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 13654 13951 . - 1 ID=cds.g14229.t1;Parent=g14229.t1 #PROT g14229.t1 g14229 MNRREIEELARTCILPASQMLVERDDDDDEPTHAGQSAAIPAAAIDDNKGAAHVHGTTYTDPTDGTVYEWDSSRAAWFPRVDEAVILQYQLNYGGSYQGGQTDPREMLEEQARIQQYNVFRELQEAKRKRDAGSSGEEDEEEDMDGLLGAAGEGGEGAGGHVRAKKAPAGDGKGGKGKKDPARTPGGWYEIPAEKNSNVYVSGLPEDITIEEFVEHMSKCGLPRPDDNGQPSAKIYRDAATGQPKGDGLFTYIKAEAVPNALLILDGSRIRGHVLSVQRAKFEMRSDVQVKRRPKKKKAKEGKGNDRLLAWDNKLTPDERRTRKAACIVILKHMFAPSEFDEEPSLLGEISQDVRDECSAFGEIAKVVVYDRHPEGVISIKFKEASSSDKCIQKMNGRFFAGRRVEAALWDGKASYIVEETEEQRAERMARWDKWIEDKAAAEAAAAAAQSTR* # PASA_UPDATE: g14232.t1, single gene model update, valid-1, status:[pasa:asmbl_6740,status:12], valid-1 NODE_392_length_24944_cov_41.997 . gene 22050 23074 . + . ID=g14232;Name=g14232.t1 NODE_392_length_24944_cov_41.997 . mRNA 22050 23074 . + . ID=g14232.t1;Parent=g14232;Name=g14232.t1 NODE_392_length_24944_cov_41.997 . five_prime_UTR 22050 22169 . + . ID=g14232.t1.utr5p1;Parent=g14232.t1 NODE_392_length_24944_cov_41.997 . exon 22050 23074 . + . ID=g14232.t1.exon1;Parent=g14232.t1 NODE_392_length_24944_cov_41.997 . CDS 22170 22799 . + 0 ID=cds.g14232.t1;Parent=g14232.t1 NODE_392_length_24944_cov_41.997 . three_prime_UTR 22800 23074 . + . ID=g14232.t1.utr3p1;Parent=g14232.t1 #PROT g14232.t1 g14232 MLKSEGVEAVFAPTVPEMYTPGTSSNPFDNNGTFVEVKGISQVLEGKYRPQFFIGVATVVNKLLNVVQPTHMYLGQKDAQQCVVLQNMVRDLLLPTIVRVCPTRREKDGLAMSSRNVYLSEEHRRIAPVFSRGLFAAQEAYTVQKVKDRKTLIDIVEKSIRSNPEPQIQYISLAHPMTLKELDVVGPEGAILSGALFLGKTRLIDNVQL* # ORIGINAL: g14230.t1 original gene structure, not modified by PASA NODE_392_length_24944_cov_41.997 AUGUSTUS gene 16070 18143 . + . ID=g14230;Name=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS mRNA 16070 18143 . + . ID=g14230.t1;Parent=g14230;Name=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 16070 16117 . + . ID=g14230.t1.exon1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 16070 16117 . + 0 ID=cds.g14230.t1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 16357 16443 . + . ID=g14230.t1.exon2;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 16357 16443 . + 0 ID=cds.g14230.t1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 16619 16707 . + . ID=g14230.t1.exon3;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 16619 16707 . + 0 ID=cds.g14230.t1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 16932 17114 . + . ID=g14230.t1.exon4;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 16932 17114 . + 1 ID=cds.g14230.t1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 17540 17774 . + . ID=g14230.t1.exon5;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 17540 17774 . + 1 ID=cds.g14230.t1;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS exon 17931 18143 . + . ID=g14230.t1.exon6;Parent=g14230.t1 NODE_392_length_24944_cov_41.997 AUGUSTUS CDS 17931 18143 . + 0 ID=cds.g14230.t1;Parent=g14230.t1 #PROT g14230.t1 g14230 MATAARYLMAALFVSEGRNATVIRDLANAAHSQHGAALVYSHVDSMYHRSSFHIAGRPQSVVDAAFAVSKEAFARIDLTKHSGSHPRVGVVDLIALYPLDCRLDAASDSSRALGRRIGEQLATPVLLYGAAHGTGRSLVDVRRQTSFYRSTGAVTPSVSTSLAPDFGPIEVPPSRGITVCGATPYVWSCNVQLDTSDLDLGAVIAKKARSETLQTMALLHDNGKVEIACNVLASPTVDAAKIESAVGAIASQHSVRVTGSYPLGIPPEAALAAAREELSKREQV* # PASA_UPDATE: g14227.t1, single gene model update, valid-1, status:[pasa:asmbl_6738,status:12],[pasa:asmbl_6739,status:12], valid-1 NODE_392_length_24944_cov_41.997 . gene 1361 6778 . + . ID=g14227;Name=g14227.t1 NODE_392_length_24944_cov_41.997 . mRNA 1361 6778 . + . ID=g14227.t1;Parent=g14227;Name=g14227.t1 NODE_392_length_24944_cov_41.997 . five_prime_UTR 1361 1578 . + . ID=g14227.t1.utr5p1;Parent=g14227.t1 NODE_392_length_24944_cov_41.997 . exon 1361 6778 . + . ID=g14227.t1.exon1;Parent=g14227.t1 NODE_392_length_24944_cov_41.997 . CDS 1579 6609 . + 0 ID=cds.g14227.t1;Parent=g14227.t1 NODE_392_length_24944_cov_41.997 . three_prime_UTR 6610 6778 . + . ID=g14227.t1.utr3p1;Parent=g14227.t1 #PROT g14227.t1 g14227 MEADHQRTRVRGWFMGLSPADRAAAVTVHDHGAVGALREMHAVKSHSGDCFFYADDDIGSDRQPFGNSFGAAGGIKRSRRRSSGAPGVTSGSMTKDGGSAGVGALRRLSGNVCYRRTNALLIHPTEEAREADLRLEQGLRLCDTERYLDTLTVSPEWLSTPARARDFVRTMEVVSRGGFLRETCCVRWDDSQREWRWDDPAWFRDMGFHSLAAFAASRLERALWAFYFEAHNLDPRGVGEKRSLGARRRDGAGSSSLRSALDPLRTGLRAFWRELSLPERKRLVEERIGDLVGEILREDFTDTPGLLGSWLDMSMGVKGHETLISFKGEVLFSSDAFVEFVYLSPIARAGTPVDRLLRKVCHRLQCACSDRMALELIASASGSGGVGEKGDDPGRTQRARRKKKKGRPTGDASSSVNRTSSSPSLTSVHGAGHGSPGAVPSLPLSSQLDGGASTPHDALDAKSRRNSDGGAPASLACVDEEGIDGNKAEGSRGKARRRRLNSEGTEGAATDASHEGRLRDLPKDGRQQSDRHHSPTKSSASPFAPPAAQSATPPLSAQQAAQLGTSAPAAHAGGATQLTFGVASDTGAFVSAYEGCSSAEAGESASELAITAVVAGAQPGSVVGGGESLQEARDAMNRILLSVYMQILQRKTLETKRRRGMLGSGGGHSLAESMVDLGTRGHPSPPRPAGPSQRASTRQPSSAAPSDANGDVHLQAPAPLSSVEARRDVTSSNPWNSLRGSGLRDAAPSSKEADHVLAPSAPMGSGSRAQQSASKSEGEEEVEEDDAPWEVVTRWSSERRLAPGKASGGRVGGVVGRGRASTRAGLSTCSGRNSPLVDHQQQQRTGELRRSHSQTGSSTAPPVKSASTGGTPAERVVPIERRNSAPTRNPTAATLNGVVVASVQRPPLAPTASAANNNSNSNSNSKWGVSGRGAAAVAMQRALPSPASTPPGPKTQTLAIASPPAAQQGKAAAASVAPTTNPWLTGKPGTRRPEDGDASPLPTSGVPQAQPPADANDECLATGEIMSPQKSAAVAPAVGKDELSAPQLAARAPAVPQSAVQSPSQQPVPSRSQNNGGRQHAHAKVESPRLPAAAVTLPPLPHSMDTEIADSGPVGFFFAPPQAVPHPPLGMFPPMWTQPLPPPVQMGPMLFTDTHPVAHPVTTQVRHAPSTRRRSLGEVDPPSGITQHSTEDHEANAKRRAGSLDNDTPPREEGVRVSTRSAPPSPHPSALQERPGRLHTGMMGYPVVSRAPPPPPPLSAWTYADDALGKEMRDFVDSVHASDNGLLRRDIILRVQQLVRGLWPHARVEVYGSCSTGLCLPSSDIDLVVCGLDPPPPIQAAGPAVVAYTHLIPLMGELAAALDAAPWCACVRCIQTARVPVIKLVGCEGIAPPAHLWGAGPPQVFPGCVPIDITFETGGAAVHRGLAARDFLRARVAAYPALAPLLLVLKDYLRVRGLNDVYTGGLGSYSLALMAVYFVGRTMPGPPYPPLGSLLVDFLLFYSQFDFTQWGISVASNSVVPHALPDRLVIEDPCTPGANVGSGSFMMWRVQAAFAEAYHLLAAPLSPRSGRHPQPPQPQPSLAHAHTHQQPIPQHAGHSHVPPPASPSAPVPGFVGRLERLLSPATWYGARPGREGGTETMEFEAHWPPLRGRLSAPAPSSKRSRSTDDALSRERQ* # PASA_UPDATE: g14231.t1, single gene model update, valid-1, status:[pasa:asmbl_6741,status:12], valid-1 NODE_392_length_24944_cov_41.997 . gene 18306 20582 . - . ID=g14231;Name=g14231.t1 NODE_392_length_24944_cov_41.997 . mRNA 18306 20582 . - . ID=g14231.t1;Parent=g14231;Name=g14231.t1 NODE_392_length_24944_cov_41.997 . exon 20528 20582 . - . ID=g14231.t1.exon1;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . CDS 20528 20582 . - 0 ID=cds.g14231.t1;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . exon 19472 20369 . - . ID=g14231.t1.exon2;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . CDS 19472 20369 . - 2 ID=cds.g14231.t1;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . exon 19040 19246 . - . ID=g14231.t1.exon3;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . CDS 19040 19246 . - 1 ID=cds.g14231.t1;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . exon 18306 18703 . - . ID=g14231.t1.exon4;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . CDS 18466 18703 . - 1 ID=cds.g14231.t1;Parent=g14231.t1 NODE_392_length_24944_cov_41.997 . three_prime_UTR 18306 18465 . - . ID=g14231.t1.utr3p1;Parent=g14231.t1 #PROT g14231.t1 g14231 MVPPRLIFVAVLALLVLSAADGTSMADVGACSRAPQRGKIISATVDTERSVTRDQAIGQIAHAFGNRLGPLVLLLTISALEITYDTQRIEVVYETVDPFGCPTIASGIVGIPLGMNSTTPMVVYHHGTKYNRFYRSTPHHPDTESELVITVFAASGHVIVLPDYLGFEASDMLHPYVHASTLGSASTDLMMAARTLLASNGIVRNGQLFLTGYSEGGYAAMATLREVQRRRMELGVQVTAASPMAGPHDISNVFFSLFASPNATYSSPVYLVFTIAAYRFVYPNDVPPLDQVFVAEYMDDIADGLSGNRSTFARLNAKLSERVSDLFTPQFARAISSPSNPLRRRLAENDMDTQPIVPAWLPIVFRHCPDDELVPFEASSVAVDNLRALGATDITLEVGPADTRHARCAPDLIIATKQGFRSMIVTGPLPQPPHATLGGVSVSGASAVITLALAALCVVLVANIA* # PASA_UPDATE: g5407.t1, single gene model update, valid-1, status:[pasa:asmbl_6190,status:12], valid-1 NODE_3542_length_3240_cov_37.9197 . gene 181 3240 . + . ID=g5407;Name=g5407.t1 NODE_3542_length_3240_cov_37.9197 . mRNA 181 3240 . + . ID=g5407.t1;Parent=g5407;Name=g5407.t1 NODE_3542_length_3240_cov_37.9197 . five_prime_UTR 181 181 . + . ID=g5407.t1.utr5p1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 181 262 . + . ID=g5407.t1.exon1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 182 262 . + 0 ID=cds.g5407.t1;Parent=g5407.t1;5_prime_partial=true NODE_3542_length_3240_cov_37.9197 . exon 405 500 . + . ID=g5407.t1.exon2;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 405 500 . + 0 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 710 833 . + . ID=g5407.t1.exon3;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 710 833 . + 0 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 1075 1247 . + . ID=g5407.t1.exon4;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 1075 1247 . + 2 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 1420 1565 . + . ID=g5407.t1.exon5;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 1420 1565 . + 0 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 1902 2016 . + . ID=g5407.t1.exon6;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 1902 2016 . + 1 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 2205 2342 . + . ID=g5407.t1.exon7;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 2205 2342 . + 0 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 2531 2628 . + . ID=g5407.t1.exon8;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 2531 2628 . + 0 ID=cds.g5407.t1;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . exon 2951 3240 . + . ID=g5407.t1.exon9;Parent=g5407.t1 NODE_3542_length_3240_cov_37.9197 . CDS 2951 3240 . + 1 ID=cds.g5407.t1;Parent=g5407.t1;3_prime_partial=true #PROT g5407.t1 g5407 RKYDECIDICTDLLKANPYDQAAWLMKTKALTEKVSLDDVEIEDEGIAEMLLDDNSVAQVPKPGTSLNVPHTGSSRPGTSSRGVRPVSQSGRPISGYARPGTNSQRPSTMEQAVSMPRTSTARPVTSSSGRFVRLGTASMLSDPSGPFINVARLDLKKYGARPALAKALFEYILLHENDARRALDLASAATEGSEYKDWWWKVQISRCYMRLGLVREAEKQLRSSLKNNEMVITYLLLAKIYVRLDQPKAAIDILSKGAEKFPGETSLLLALARLHDALNDGTTAIAFYKKVLASDCANVEAISSMAANYFYTDHPEMALRLYRRLLQMGVCNAELFNNLGLCCFHAQQYDHALTCFERALIVADDATQADIWHNIGHVGLALGDLSLGFQSFKLATACDANHAEVRSLLLSLPLPPPLS # PASA_UPDATE: g5701.t1, single gene model update, valid-1, status:[pasa:asmbl_6401,status:12], valid-1 NODE_3680_length_2968_cov_39.8873 . gene 262 1123 . - . ID=g5701;Name=g5701.t1 NODE_3680_length_2968_cov_39.8873 . mRNA 262 1123 . - . ID=g5701.t1;Parent=g5701;Name=g5701.t1 NODE_3680_length_2968_cov_39.8873 . five_prime_UTR 1043 1123 . - . ID=g5701.t1.utr5p1;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . exon 1040 1123 . - . ID=g5701.t1.exon1;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . CDS 1040 1042 . - 0 ID=cds.g5701.t1;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . exon 770 898 . - . ID=g5701.t1.exon2;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . CDS 770 898 . - 0 ID=cds.g5701.t1;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . exon 511 566 . - . ID=g5701.t1.exon3;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . CDS 511 566 . - 0 ID=cds.g5701.t1;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . exon 262 369 . - . ID=g5701.t1.exon4;Parent=g5701.t1 NODE_3680_length_2968_cov_39.8873 . CDS 262 369 . - 1 ID=cds.g5701.t1;Parent=g5701.t1;3_prime_partial=true #PROT g5701.t1 g5701 MSILAYNGGAIVAMIGKDCVAIAADRRFGIQAQTVSTDFQKIFKMEETLFIGLAGLATDVQTISQRLEFKLNLYRLKEDRPMRAKPFMHVMSNLLYEK # PASA_UPDATE: g5702.t1, single gene model update, valid-1, status:[pasa:asmbl_6400,status:12], valid-1 NODE_3680_length_2968_cov_39.8873 . gene 1689 2838 . + . ID=g5702;Name=g5702.t1 NODE_3680_length_2968_cov_39.8873 . mRNA 1689 2838 . + . ID=g5702.t1;Parent=g5702;Name=g5702.t1 NODE_3680_length_2968_cov_39.8873 . exon 1689 1716 . + . ID=g5702.t1.exon1;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . CDS 1689 1716 . + 0 ID=cds.g5702.t1;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . exon 1858 1928 . + . ID=g5702.t1.exon2;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . CDS 1858 1928 . + 2 ID=cds.g5702.t1;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . exon 2030 2377 . + . ID=g5702.t1.exon3;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . CDS 2030 2377 . + 0 ID=cds.g5702.t1;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . exon 2680 2838 . + . ID=g5702.t1.exon4;Parent=g5702.t1 NODE_3680_length_2968_cov_39.8873 . CDS 2680 2838 . + 0 ID=cds.g5702.t1;Parent=g5702.t1;3_prime_partial=true #PROT g5702.t1 g5702 MLKDEEIIDGSPMADEEDEAKGEDEEGGTDGGQEIEDDENDEQVEVNDEGAGDATSATPGGADDAPAAGDNADGDEGDEVVTDAAPQSQSRSDAGANGDADAGDAEDAEEKNEDDEADDEVVNGSASARPTSTGSAKVAKPETPAEDKDEPNPLTTGVISEGLSLLCKTGNGLAHAYVRLEAKDKDITDVHAIRDFVHLRYV # PASA_UPDATE: g3592.t1, single gene model update, valid-1, status:[pasa:asmbl_4283,status:12], valid-1 NODE_2426_length_6324_cov_39.7757 . gene 582 2800 . + . ID=g3592;Name=g3592.t1 NODE_2426_length_6324_cov_39.7757 . mRNA 582 2800 . + . ID=g3592.t1;Parent=g3592;Name=g3592.t1 NODE_2426_length_6324_cov_39.7757 . five_prime_UTR 582 635 . + . ID=g3592.t1.utr5p1;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . exon 582 638 . + . ID=g3592.t1.exon1;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . CDS 636 638 . + 0 ID=cds.g3592.t1;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . exon 1065 1894 . + . ID=g3592.t1.exon2;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . CDS 1065 1894 . + 0 ID=cds.g3592.t1;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . exon 2225 2800 . + . ID=g3592.t1.exon3;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . CDS 2225 2564 . + 1 ID=cds.g3592.t1;Parent=g3592.t1 NODE_2426_length_6324_cov_39.7757 . three_prime_UTR 2565 2800 . + . ID=g3592.t1.utr3p1;Parent=g3592.t1 #PROT g3592.t1 g3592 MAARPLVSVLSAEAENEVKGNVTLPSVFKAPIRPDVVNHVHASMSKNKRQAFAVSEYAGHQTSAISWGTGRAVARIPRVSGGGTHRAGQGAFGNMCRGGRMFAPTKTYRRWHRKINVNQRRFATVSALAASALPALVLARGHRVEQVPEVPLVVSTGIESITKTSAAVALLKRVKAFADVEKVKSSKKLRAGKGKLRNRRTVQRRGPLVVYAEDRGISKAFRNIPGVELASVDRLNLLQLAPGGHLGRFVIWSQSAFEKLDAVFGTWRRESEAKGGYHLPYPTMANSDLTRLINSDEIQSVVRPVKEASRHSTIKKNPLRNVNVLLKLNPYAKTARRAELLTQESRAKSRAAKVEASRAAGSAAGKTTDATKQRASLRKASVAHGKPLLA* # PASA_UPDATE: g3593.t1, single gene model update, valid-1, status:[pasa:asmbl_4282,status:12], valid-1 NODE_2426_length_6324_cov_39.7757 . gene 3332 6086 . - . ID=g3593;Name=g3593.t1 NODE_2426_length_6324_cov_39.7757 . mRNA 3332 6086 . - . ID=g3593.t1;Parent=g3593;Name=g3593.t1 NODE_2426_length_6324_cov_39.7757 . five_prime_UTR 6086 6086 . - . ID=g3593.t1.utr5p1;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . exon 5893 6086 . - . ID=g3593.t1.exon1;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . CDS 5893 6085 . - 0 ID=cds.g3593.t1;Parent=g3593.t1;5_prime_partial=true NODE_2426_length_6324_cov_39.7757 . exon 5156 5669 . - . ID=g3593.t1.exon2;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . CDS 5156 5669 . - 2 ID=cds.g3593.t1;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . exon 4783 4899 . - . ID=g3593.t1.exon3;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . CDS 4783 4899 . - 1 ID=cds.g3593.t1;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . exon 3332 4560 . - . ID=g3593.t1.exon4;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . CDS 3507 4560 . - 1 ID=cds.g3593.t1;Parent=g3593.t1 NODE_2426_length_6324_cov_39.7757 . three_prime_UTR 3332 3506 . - . ID=g3593.t1.utr3p1;Parent=g3593.t1 #PROT g3593.t1 g3593 YKPIAFHFTDNVPATAASCDRVLKVASVRDYSVGRDRLFLRYWAGDELDRWMEHLKKSATKVQKIFRGWRARRHFSELILRHRKKFTFDRVVSEFGKKSKDGPIGLRRSPRVSDADDTINEAGEAVAAAAALLAGATAAVASSSGAAVSRPPVAPRPLSRPPPVRGGDSGTSSPTAVDSPVTSNRRTSLDVQSQPRGGPPERSLTPTPTLQVSSPSMSPGQQRGGTQLPKLGMNDSWYHGPLGRTEAESTLASASAGAWLVRDSSTADAYSLSVKCGDGTVRHFLIISTESGYQLSGHPRESFTSIPNLLQFFSTSPIPNTGEVLYAPIVMEDIAPSPRVSRASLSPGRPGSVSLLISPADSGDDSDMSSSSPRRMSVRKYEHEIEEAKRLLEIEMRIADAANRLAAEPTDDKKVQRKRKENAETAAKNIERLRARLEKLEGKQAKQDDKFNKEQEKIEKKRRKSSVTGDASPDGLGIKASNRGSATVALRATQERARVDRKRSYSNDFDRRQDSLGSTGSPGASPTHSPLVSPSMPKKSPSEFSASAGRQTLRADDATARVFRSGGEYSGQPARPGPPSPKPGPPPSPVPAAGSPGAKKKWAKFNRMEGRGIDRLYDMKSNYRK* # PASA_UPDATE: g13236.t1, single gene model update, valid-1, status:[pasa:asmbl_63,status:12], valid-1 NODE_1019_length_14639_cov_41.4604 . gene 2 14477 . + . ID=g13236;Name=g13236.t1 NODE_1019_length_14639_cov_41.4604 . mRNA 2 14477 . + . ID=g13236.t1;Parent=g13236;Name=g13236.t1 NODE_1019_length_14639_cov_41.4604 . five_prime_UTR 2 3 . + . ID=g13236.t1.utr5p1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 2 7050 . + . ID=g13236.t1.exon1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 4 7050 . + 0 ID=cds.g13236.t1;Parent=g13236.t1;5_prime_partial=true NODE_1019_length_14639_cov_41.4604 . exon 7266 7358 . + . ID=g13236.t1.exon2;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 7266 7358 . + 0 ID=cds.g13236.t1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 7526 10330 . + . ID=g13236.t1.exon3;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 7526 10330 . + 0 ID=cds.g13236.t1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 10595 10998 . + . ID=g13236.t1.exon4;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 10595 10998 . + 0 ID=cds.g13236.t1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 11191 11652 . + . ID=g13236.t1.exon5;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 11191 11652 . + 1 ID=cds.g13236.t1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 12005 14021 . + . ID=g13236.t1.exon6;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 12005 14021 . + 1 ID=cds.g13236.t1;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . exon 14289 14477 . + . ID=g13236.t1.exon7;Parent=g13236.t1 NODE_1019_length_14639_cov_41.4604 . CDS 14289 14477 . + 0 ID=cds.g13236.t1;Parent=g13236.t1;3_prime_partial=true #PROT g13236.t1 g13236 KNQEHVMDELIGRHPDLLLRTQLVAHVETLRPNVSFGYRDGEASSSRWYYEVTVRHRQEKSWLLRVGWATTGFQPLPNEGVAVGDDLFSFGFDGARKWHAGRSERYGPGRDLQEGDVVGCYLDLKERLVFFAVNGESCEIAFGGFDTSGSFYPAISVSDGAKVGLNFGQSRPFRYRQMEAYSGVHEARSRGRDMEVHPCLFTGTPRSEGGRQVELCELIGPGDYEEHVSFIPKPVDTSLVKLPSEIVPLTELIAENIHDVWSRDKIGAGWTCGERRNDAAKVHNLLKGYSQLTDRDKSYNRDLALETLKVLTQLGYRVISTSSPSDERPTVELAESFRLPNGYKPRPIDTARIQLSEELEALVGIMAENSHDVWAQQRIKEGWTFGFSKDDQSKRNPMLVPFDQLDAQSKENNSMTCREILKTIVGFGFVLEPPPVMDVGREKGLSRKIAGICKNLRSFRASRRFALSRRRWYYEVELVTDGYMRIGWSTEGFAPLPRQGRGVGDDKFSFAFDGFLVRKWNGSSENYGRTWRAGDTVGCLIDLDARRISFSLNGQPLSTGEERASGAYAFEGFDGGRAFVPAISLAANQRVRVNFGAAPMRYFHLYGLQEGYEPVCNASVHDISMRYSSDTCTFQQLQDCDGLAIRLVRSSETFCEFTAQQTRPPSSTSLLDPSVLRLNMGVSGEERGRYCFEVEIHPGQDERHLFVGWVTSAYRASPAESSMGLGKFAYLLDGRALAAVKPKKMYDDKRRIVCVLDLDEGWVRFLIDGEEFSADGSGGPYRIERGFRLFPLVCIAPTCPEPIKIRIGRNAGMQCESLCATLYGCKNSPGLLKGVSPRRLEFQRLVSPVWRPVDPPARIVTTLSDGDLVSDADFSTAGKVAGDPLSCALHPSPRSLVVKLEEMDATSHLPSLFRGERLAEYHVATLRLLSRLCAGGNMKGQDIRRRFLDDQQVFHCIRLEQLPSAVRVSYFEFALSLREPVAKLTGEGASTQFVFNSESVSTFDGDDALDQARSGSLYRKIKTHVLEWMNYRLHSAPTGMSGVHHWVKDEGVAVAMLRICADMIARGEFSDIDIAWLMHAIEPSTFYAAPWAPVLPSSQLGLINANISEPMQLELCAVFHSLCDRLLMMRTREAVRMADALVLGCIAAQSAADRTGRGRRSTIAERIRLSVALNDQIENMLLDPRSASVNRMHARVLAACRGLDEPATPVSIDWQSDGWLAKHAALLHSFVRDTVLGWTEKQIGTPELVQSSVGLLYRQYTLVEEVRGALEHTRFVRTVEGGSYMTHVVGALREIVRVRMDSKTMDSTRALIEHLFQQCSPTDAKPGVEVQDLLRGIGAHDVIIMIMQNIVSPEMHAYEATASIASLEREVLRKLQTVQAAGGQPLLTSGGAARRGSVRAVPVISEYSAWHEVLRDMQQTQHNYANFEAHEDVTGHLAVPTAADLSAIQAFAAAAAAASAELSELGEIGEPRDRDAECAPTGRGRAVLSRMYARLGLATVEQRAEFLECTLREWTVPRRASVMDGQWVRPGGPIGESVGCSRELFAACCRFVVHFCRENRANQRAVFRHVDFLLGLLGRCLPVAETIAEMLRDNDDLYSLMGDRRIEYVVAHLARSVRAGLYGDHHLSILGLIVKGNIDVMHEYSEGNNASSSARPAKQSPSHSHSHSHSHGHNSHSHSSSHHVASGSSPSSVTNAGLVLKLLVKRPECLVLSTNSDNNRQLVAATLGYDAHGGSGTLPGDIGYHVDLIELLAMCAPTNFESRSAAVASQGILRSLVSLEDLSAVLCSPSTPTFIKPPFFRYLNDVYGVGSRPLFLRLIEQCVMRDLRHIVYAVDAPQREQSSQYVYMSLLPFLAAKCDNFREKDGGSAMVYPLMSAVYQLGRNARGPQLSEVTACVVAHMKHLSPHIFLRLLRRCAQDLLRVMPHTSVILKMLFNFFERHVAYFGFVGDRAYGMASNEERQVAEILFERLYVLVSRDRDELEAEGLLTDALRALCAIGSHLSPDTLTSAVDRSWLRDDDATLDEGEAVAYRPSPLFTDHIRVPADIVPLLDRLAENIHEAWALERYTRAHRHHVAQQQAQAHAHYGGLVSERARGAQSQQHQQLNVPSGSSPAAQWQRPRSPSPVRPGGPVIVTHPPPHMSPPMHSPIPGSGIASNGYPSPSIQHGHIQTNAHGNAPSSPSSRGPPHVHVTGSRHRDYLPWRECGPEYRDRLLSEAKEAIRALLAMGCSFERVRDVLSTSAPEETTAKPAYIDRRQYSYASQLSSSSSPTSLGLGLPPPSSARHVNGDATHAAEASGYVPKPLNLAGVPISTALEPIVERLADHRHELWAAAKLGSGWRYGLRPKAGKSLRENPRLIPYDMLTDAEKLPDRKFAQDVVKLATVMGFDIKVGVSADADAAPSGPEQRFAAKLMRMAEESIAAAEHVKSASLNNTPPKTMGRSSSASFVPSTTVTPAKPATNGGVAHANTNGKSPATTPASPAARKRRVSIVSPPMTAEREARPSVPPPISPPQPTTSARAAASPSTPTGSASVSSVGSSASSKSTQSQGSPEFVLHAVVPLLTQCVDMHRTYFLGTNANGCASIFERRAAEVVFDKLFRMARTRIRTRDTAWCTLASLRAFNLCFQAMLRALSPEMFAKHLIGCLDDICRVGDSPEHVFSIALPCIVEFCKRVPKGRLQDVAGMRPLQELFRATLCLLEGSSIDIAARRTCIGAALEAMVGLLPPDTLQNADVAIVPSVESALALLREVSAGERKDKRRGLVVESLIPLVCGYASVHAPAGADGEKLVADAFASVVRLLSGRDRELKVRPLVRSAHALIDRLAPSHVVRHFSSATGQIATAFKIFSRNEGSRLEGLDDDSAEKRWLYVSIDALVQLFSRHFDVHGWFWRDACAAPQRVAGRQPSVPQPSHPVATADEWDEFSRLFSGLAKLFNHRFDVRDLPTARDRDETGVRACLRKMVPIKMQRLGPYETVVRMAVGKLSPAVAGGAHGKAAAAAAAAAAVAASQTGATPTPAPTPTTMPATPTPASDEPAGSRQLEELHVFVSAEIARIPRPVVPVTDSRLTAAIDALVPHGITGLFGRRHRLSEAEERAETERSVCELAELLSRLQREPVESLWKRSTRVYLHRHRYNEIGGWLRQLVRRRHFNYNEMSAHDTLVNLVVRRYVTLWVAPLTETGKDKMIEDMKRHERGSSEVDRVRMSQMIKMFHDAPLDQSADPLYLHLAQILSRSCKTSPVELVPFTETATEKGVGVGVGVGVGVAKEKEGEDDADELSFEDAERKKRELRARQGHLSERGCVETVIHLISASNGRITPLLHEVIRLAIALLDGGNEDVQARMLACLLAHKDAKFFSSVTGLVTHCSVLDHEAWSRKALAMSLGMNYDEFSGPQTESSFVCDLFRFLQLLCEGHNLDFQNYLRTQPGNTKTYNIVVSTVDYLLRLQEKFGDVYWFYQHRNTLDDAGWRLFSESLRIANQVFTTLTEYVQGPCRHNQLALAGSRLSDAVNGFFSIFGSLHRKLSADPAQVELLREFCEVQLSLVTTLTSMLEGNAKSDLIAHHMIDAFSEGFSAIEETLQFCDVYISLHHLATSEEFETFDLNGDGCISPSEFETVMRRHMTYTEKQIQFLLTCADANKDGRLDYREFTQRFHEEALEIGFMIVVLLKSLAGLSGRVDAFSDSPGFRRLELYFKNNLGRIEIIGKSGCPEFIYFKIEDEWKRQWEKPQVQDSKRSFLNEVMTEHSTKRLEEYVGFCEDTIFEMQYSARVFGEQHQQTHSGDDRASHLPSAASEVIRVVLGVADIAFSIATLPVGAVAGACRSVGSSLGRAATTVKSTLDPLWLREWLANRRRAARGVDANSGADGDLDDSRSSSSSSDVNRRARIVRRRRQDTIYKVAEAEHGPHALAHVQKAHDQLARENNPDVAHAAAASAFAETEEHSHSHVHAHAQGPGGAAGTEGLASKYIPRMATANRTFKSIMARMYVGSRNVAFVTTVLLNITLLFVRVDDITGMGTMEADGDDFVIDDAVVRRMAQVLPYFHFAASLCMLIGYYCLKYPVHIFRREKEIARMLEWGGMWITQREPPEMVDSLWFYWDRMAISSRSFPSNYWDKYVKRRVRERYGDEKAAEIATILGHDDQGDAATVAAPKGVRGAVGALAKRVVVWMLSSVGVSKAEETDVVYTVWKAGVILGGRDFFYNILYLLFSFLGLYSPFFYCAHLLDIAHRNKTLRNVLRSVTFNGWQLLLTVMMMSIVIYIYTVFAFTFFRKFYNVCDEAHDCTVIEHKCHSMFQCFIFHLSVGLRQGGGIGDVLQDADGDPKESYRIVFDLSFFLIVIVILLAIVQG # PASA_UPDATE: g75.t1, single gene model update, valid-1, status:[pasa:asmbl_2589,status:12], valid-1 NODE_1773_length_9307_cov_41.717 . gene 4486 5875 . + . ID=g75;Name=g75.t1 NODE_1773_length_9307_cov_41.717 . mRNA 4486 5875 . + . ID=g75.t1;Parent=g75;Name=g75.t1 NODE_1773_length_9307_cov_41.717 . five_prime_UTR 4486 4525 . + . ID=g75.t1.utr5p1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . exon 4486 4528 . + . ID=g75.t1.exon1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . CDS 4526 4528 . + 0 ID=cds.g75.t1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . exon 4923 5006 . + . ID=g75.t1.exon2;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . CDS 4923 5006 . + 0 ID=cds.g75.t1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . exon 5275 5374 . + . ID=g75.t1.exon3;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . CDS 5275 5374 . + 0 ID=cds.g75.t1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . exon 5781 5875 . + . ID=g75.t1.exon4;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . CDS 5781 5803 . + 2 ID=cds.g75.t1;Parent=g75.t1 NODE_1773_length_9307_cov_41.717 . three_prime_UTR 5804 5875 . + . ID=g75.t1.utr3p1;Parent=g75.t1 #PROT g75.t1 g75 MPKQIKEIKDFLLTARRKDATSVKILKAKEYVKFKVRCSKYLYTLVVTDKDKADKLKQSLPPALKVEDV* # ORIGINAL: g74.t1 original gene structure, not modified by PASA NODE_1773_length_9307_cov_41.717 AUGUSTUS gene 2691 4157 . - . ID=g74;Name=g74.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS mRNA 2691 4157 . - . ID=g74.t1;Parent=g74;Name=g74.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS exon 2691 4157 . - . ID=g74.t1.exon1;Parent=g74.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS CDS 2691 4157 . - 0 ID=cds.g74.t1;Parent=g74.t1 #PROT g74.t1 g74 MRQVRALLVLAVAIALARGSFASSPKKRVAIIGGGIGGGSTAYYTSKFLKDGGHPDAEIIAFESRDYIGGRLKSTVFDGVRIELGGDAWANPNTYMLELTKELNLPVDLSADSGKEDAAGVYSLKTLAQNLKERFGDMIGVWRGKDEWVNLESAVLGHIFSDAKAGLTLAEFFLKLKLNYFVRDHLRPRGGAFESVADFLSAGGLDDYTLTSTSDYFASAGVASATVDDLFVPLNRVIYDQSAEMHAFGTLVSLTSVTSAQSCADGNDAVVRTLFTAGNATVHLSTRVTSVTKSASGSGFTVTTLDDSGASAAEFDAVVVAAPIEHANVSFDGSFPAVAARPFVHWFVTMVSADGVSPTFFNKPADWRAPDAIFTTDGSNAPFNVIQLLVDGSDTVSGRRIYKIFSNDDVSALVPSLFLNGSVAAVQHWPYTFPHLSPLPQRGAELQPVVLASEGVFYLNTMESIASAMEVSVIAGRNAALLLAQLFK* # PASA_UPDATE: g77.t1, single gene model update, valid-1, status:[pasa:asmbl_2587,status:12], valid-1 NODE_1773_length_9307_cov_41.717 . gene 7941 9135 . - . ID=g77;Name=g77.t1 NODE_1773_length_9307_cov_41.717 . mRNA 7941 9135 . - . ID=g77.t1;Parent=g77;Name=g77.t1 NODE_1773_length_9307_cov_41.717 . five_prime_UTR 9104 9135 . - . ID=g77.t1.utr5p1;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . exon 8921 9135 . - . ID=g77.t1.exon1;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . CDS 8921 9103 . - 0 ID=cds.g77.t1;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . exon 8526 8654 . - . ID=g77.t1.exon2;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . CDS 8526 8654 . - 0 ID=cds.g77.t1;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . exon 7941 8203 . - . ID=g77.t1.exon3;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . CDS 8000 8203 . - 0 ID=cds.g77.t1;Parent=g77.t1 NODE_1773_length_9307_cov_41.717 . three_prime_UTR 7941 7999 . - . ID=g77.t1.utr3p1;Parent=g77.t1 #PROT g77.t1 g77 MSASSVVRTATAAVTGAPASVSSAVRRAEVLRLYRHMLRTAAQWPVNANRHGRDFGERLHKDIPVEFRKNAGEVDEAKTNALLADGRRQLAAMKRLLANTYLIEYERKSDTTYSENPAAAEYFLSTEHQKSLKKRNWFVNFFFPKKEDVAVAEPIYEQSRLPGGLKRRKAI* # ORIGINAL: g76.t1 original gene structure, not modified by PASA NODE_1773_length_9307_cov_41.717 AUGUSTUS gene 6444 7302 . - . ID=g76;Name=g76.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS mRNA 6444 7302 . - . ID=g76.t1;Parent=g76;Name=g76.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS exon 6860 7302 . - . ID=g76.t1.exon1;Parent=g76.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS CDS 6860 7302 . - 0 ID=cds.g76.t1;Parent=g76.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS exon 6444 6567 . - . ID=g76.t1.exon2;Parent=g76.t1 NODE_1773_length_9307_cov_41.717 AUGUSTUS CDS 6444 6567 . - 1 ID=cds.g76.t1;Parent=g76.t1 #PROT g76.t1 g76 MVSQKDIAPRRSLSGRQRSLNNDADDDNFDRASIVTESLSALDVNNGGGRDSPQTSSSRRRLSDATRASADMDAVWGAISDSRAYGTQESERRPHGDSSRGSVGERGNGGLESFIEQQFRIQHANGDEEIDAARQERFLERALAESRRMNAEVAKSREKRDVLHRQLGGDKFSQWTKEHVTEVRSKPQ* # PASA_UPDATE: g73.t1, single gene model update, valid-1, status:[pasa:asmbl_2588,status:12], valid-1 NODE_1773_length_9307_cov_41.717 . gene 273 2375 . + . ID=g73;Name=g73.t1 NODE_1773_length_9307_cov_41.717 . mRNA 273 2375 . + . ID=g73.t1;Parent=g73;Name=g73.t1 NODE_1773_length_9307_cov_41.717 . five_prime_UTR 273 274 . + . ID=g73.t1.utr5p1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . exon 273 433 . + . ID=g73.t1.exon1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . CDS 275 433 . + 0 ID=cds.g73.t1;Parent=g73.t1;5_prime_partial=true NODE_1773_length_9307_cov_41.717 . exon 886 981 . + . ID=g73.t1.exon2;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . CDS 886 981 . + 0 ID=cds.g73.t1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . exon 1232 1318 . + . ID=g73.t1.exon3;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . CDS 1232 1318 . + 0 ID=cds.g73.t1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . exon 1565 1687 . + . ID=g73.t1.exon4;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . CDS 1565 1687 . + 0 ID=cds.g73.t1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . exon 2169 2375 . + . ID=g73.t1.exon5;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . CDS 2169 2198 . + 0 ID=cds.g73.t1;Parent=g73.t1 NODE_1773_length_9307_cov_41.717 . three_prime_UTR 2199 2375 . + . ID=g73.t1.utr3p1;Parent=g73.t1 #PROT g73.t1 g73 TTKRHSTFYDGASTSPQGVCHISMGDPFCAHTRGVVVDVCERLGLPHHKRGTMVTIEGPRFSSRSESHMFRAWGGDVINMTTVPEVVLAKEAGLCYAAIAMATDYDCWRETHEPVTVAAVLATMAANATKVTQLLTEAIPELAKSNWVPAFTELQALASGSVML* # ORIGINAL: g3055.t1 original gene structure, not modified by PASA NODE_7360_length_445_cov_42.5243_potentialcontaminant AUGUSTUS gene 1 345 . - . ID=g3055;Name=g3055.t1 NODE_7360_length_445_cov_42.5243_potentialcontaminant AUGUSTUS mRNA 1 345 . - . ID=g3055.t1;Parent=g3055;Name=g3055.t1 NODE_7360_length_445_cov_42.5243_potentialcontaminant AUGUSTUS exon 1 345 . - . ID=g3055.t1.exon1;Parent=g3055.t1 NODE_7360_length_445_cov_42.5243_potentialcontaminant AUGUSTUS CDS 1 345 . - 0 ID=cds.g3055.t1;Parent=g3055.t1 #PROT g3055.t1 g3055 MLELALKIGFDLGFRVDDDILFLKPGWDELYVNAVSTGPYEHLAFLHVAHRLELFRKVHGSEAELPPPARLGDSLVSYVSVHDVMGAFWTFTPRLIRTIGYIDELNFPTRGQWHT # PASA_UPDATE: g8182.t1, single gene model update, valid-1, status:[pasa:asmbl_7047,status:12], valid-1 NODE_4163_length_2093_cov_37.9395 . gene 566 1591 . + . ID=g8182;Name=g8182.t1 NODE_4163_length_2093_cov_37.9395 . mRNA 566 1591 . + . ID=g8182.t1;Parent=g8182;Name=g8182.t1 NODE_4163_length_2093_cov_37.9395 . five_prime_UTR 566 745 . + . ID=g8182.t1.utr5p1;Parent=g8182.t1 NODE_4163_length_2093_cov_37.9395 . exon 566 1591 . + . ID=g8182.t1.exon1;Parent=g8182.t1 NODE_4163_length_2093_cov_37.9395 . CDS 746 1423 . + 0 ID=cds.g8182.t1;Parent=g8182.t1 NODE_4163_length_2093_cov_37.9395 . three_prime_UTR 1424 1591 . + . ID=g8182.t1.utr3p1;Parent=g8182.t1 #PROT g8182.t1 g8182 MQRRRKRISACGEYVLVVVVRVCVYVCECACGVRYVCPWADNARIFAHERDKKKAEKRAINAVFTQRKRNIKKSNHNSVHEDDCCFLCFAVGNTLCLKMATFASPPLKSDSDTRMGLLFLTCCSHSGVGPSDESEDWSMSSFGASLPRALSDQSNSKKSYRCSMFRNTRNGQGSFVAESVLANHSRRPTAYVVTGTTEVLLPSAPMPFKMCLAASGNTPEGGSLS* # PASA_UPDATE: g1346.t1, single gene model update, valid-1, status:[pasa:asmbl_8743,status:3], valid-1 NODE_662_length_19339_cov_40.995 . gene 1778 5835 . - . ID=g1346;Name=g1346.t1 NODE_662_length_19339_cov_40.995 . mRNA 1778 5835 . - . ID=g1346.t1;Parent=g1346;Name=g1346.t1 NODE_662_length_19339_cov_40.995 . five_prime_UTR 5726 5835 . - . ID=g1346.t1.utr5p1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . five_prime_UTR 5577 5616 . - . ID=g1346.t1.utr5p2;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 5726 5835 . - . ID=g1346.t1.exon1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 5554 5616 . - . ID=g1346.t1.exon2;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 5554 5576 . - 0 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 5181 5410 . - . ID=g1346.t1.exon3;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 5181 5410 . - 1 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 4857 5042 . - . ID=g1346.t1.exon4;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 4857 5042 . - 2 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 4465 4737 . - . ID=g1346.t1.exon5;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 4465 4737 . - 2 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 4077 4303 . - . ID=g1346.t1.exon6;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 4077 4303 . - 2 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 3684 3932 . - . ID=g1346.t1.exon7;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 3684 3932 . - 0 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 3395 3559 . - . ID=g1346.t1.exon8;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 3395 3559 . - 0 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 2534 3253 . - . ID=g1346.t1.exon9;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 2534 3253 . - 0 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . exon 1778 2405 . - . ID=g1346.t1.exon10;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . CDS 2088 2405 . - 0 ID=cds.g1346.t1;Parent=g1346.t1 NODE_662_length_19339_cov_40.995 . three_prime_UTR 1778 2087 . - . ID=g1346.t1.utr3p1;Parent=g1346.t1 #PROT g1346.t1 g1346 MARPVKEDAFATAILNKKAAPHRLIVDDAVNDDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRDTVCIVLADESCSDDRIRMNKVVRTNLRVRLGDVVSVHACPDVPYGKRIHVLPIDDTIEGLTGNLFDVYLKPYFIEAYRPLRKGDLFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGDPIKREDEEDKLNEVGYDDIGGVRKQLAQIKEMVELPLRHPQLFKSIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESENNLRKAFEEAEKHSPAIIFIDEVDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDAVGRLEVLRIHTKNMKLGTDVDLEKIANETHGYVGSDIAALCSEAALQQIREKMDLIDLEEDTIDAAVLDSLAVTMDNFRHALQQSNPSALREAVVEVPTVTWTDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGGGDAGGAADRVINQILTEMDGMNAKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDEKSRANILKSALRKSPVAADVDLDYLAKVTNGFSGADLTEICQRAVKLAIRESIDKDIRRQRELAEAGTASMDTEEVDPVPEIRKDHFEESMKFARRSVSDNDIKKYKMFSETLQQSRGFGSNFRFPEGEAPSNAGFDQGANNDDDLYS* # ORIGINAL: g1349.t1 original gene structure, not modified by PASA NODE_662_length_19339_cov_40.995 AUGUSTUS gene 13274 16485 . - . ID=g1349;Name=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS mRNA 13274 16485 . - . ID=g1349.t1;Parent=g1349;Name=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 16072 16485 . - . ID=g1349.t1.exon1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 16072 16485 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 15797 15912 . - . ID=g1349.t1.exon2;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 15797 15912 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 15381 15606 . - . ID=g1349.t1.exon3;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 15381 15606 . - 1 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 15092 15238 . - . ID=g1349.t1.exon4;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 15092 15238 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 14735 14887 . - . ID=g1349.t1.exon5;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 14735 14887 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 14396 14490 . - . ID=g1349.t1.exon6;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 14396 14490 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 14184 14238 . - . ID=g1349.t1.exon7;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 14184 14238 . - 1 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 13759 13945 . - . ID=g1349.t1.exon8;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 13759 13945 . - 0 ID=cds.g1349.t1;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 13274 13428 . - . ID=g1349.t1.exon9;Parent=g1349.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 13274 13428 . - 2 ID=cds.g1349.t1;Parent=g1349.t1 #PROT g1349.t1 g1349 MTAPPTPSHAMATATEAQLEDCQPVPHPPPSAVTTPAPNTLHPLSSTADTAVRASDAKPQAPGAPPALAPASPMDAFLRDHSYARPPSTKTSAPVVATVSEKRKGPAVQPHTATPAPAASNLTSASGGAKSDTKSGLMVGKEEASARAAWLSPARYHFLSTAQCLPPLDECWDGIKRPAWSDAQFAAVTKVCEWVDECHVLRLTSPLAAALGTAGAVSRAGAQSPSGGASTPAAVSVSKEREALLNVALYTERIADRLRRLFGELCWDASLVASISGSALDVFERERLEIYIDALRCLHAKIPQLFDASGLLLMSASSRFNACDGPSSPNAQLQRIICTALPSVEMAHRRTQVVLTPLLLPTNQRPLIILAPNEQGWSSHRMQRWKDSLGDLGKVITCTIKPPRDANDTSLTAHVVEPAPFPDVPSAGAGRKKSAKRRLEKPEKGTPAPKKAKFVEPVSHIGKRDDAETGGEDGEAVRLPTDRNGNPSAKPSVIVAEELFLTLATKVAEASVVCT* # ORIGINAL: g1348.t1 original gene structure, not modified by PASA NODE_662_length_19339_cov_40.995 AUGUSTUS gene 11492 12151 . - . ID=g1348;Name=g1348.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS mRNA 11492 12151 . - . ID=g1348.t1;Parent=g1348;Name=g1348.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 11492 12151 . - . ID=g1348.t1.exon1;Parent=g1348.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 11492 12151 . - 0 ID=cds.g1348.t1;Parent=g1348.t1 #PROT g1348.t1 g1348 MKAPSFLLVVEGAHANLRMSVAEQLRLRTTQEHTDARVLQAISAFLARTFASLVEKHQSAALQSQAAAATAAAEGANKPKKKKKRGEDADGITVDTPVSKKRRKKGDGDPPTATLPPTPAPVATAQRPAAVAAATVVSPTGAPEPPPVRKGKGRPRAVDAAAARAALVTTVASVGSTGAVVESAGTVGAGGPLVESASNTLSVQAVTTRALQDGAASEK* # ORIGINAL: g1350.t1 original gene structure, not modified by PASA NODE_662_length_19339_cov_40.995 AUGUSTUS gene 17190 19339 . + . ID=g1350;Name=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS mRNA 17190 19339 . + . ID=g1350.t1;Parent=g1350;Name=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 17190 17334 . + . ID=g1350.t1.exon1;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 17190 17334 . + 0 ID=cds.g1350.t1;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 17560 17649 . + . ID=g1350.t1.exon2;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 17560 17649 . + 2 ID=cds.g1350.t1;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 17771 17875 . + . ID=g1350.t1.exon3;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 17771 17875 . + 2 ID=cds.g1350.t1;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 18164 18310 . + . ID=g1350.t1.exon4;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 18164 18310 . + 2 ID=cds.g1350.t1;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 18505 19339 . + . ID=g1350.t1.exon5;Parent=g1350.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 18505 19339 . + 2 ID=cds.g1350.t1;Parent=g1350.t1 #PROT g1350.t1 g1350 MSRDRCATASGLDAATISPKKGTVSKRKLEKEKETLPADYFRRCSSFSVREILANVISKLGGDQNPESWVLYAVHRHSPPRFLEYPELIQEVMKNTKSRVMKVYLKTAAEKRNYDEAAARASGAPKPNAPVMNPILQEGVQMKEDFWGNPMFLKTGNSKHAATVAAAPRSPKEWRGAGMDLLPADLRTSTYSFASLLRKPSITDPLPADSNSLSVPQAPARRQSAAANLGASGYGPSKLGMGSGTPPTAPSSSGPPPPPAPAAVKAPPPPPSVGGGPPPPPPAPVAVKAPPPPPSMGGGPPPPPAPPSMGGGPPPPPPAPVAVKVPPPPPSMGGGPPPPPAPPSMGGGPPPPPSAPAAFKAPPPPPSMGGGPPPPPPSMGGGPPPPPPAPVAVKAPPPPPSMGGGPPPPPPAPVAVKAPPPPPSMGGPPPPPAPSMGGGP # ORIGINAL: g1347.t1 original gene structure, not modified by PASA NODE_662_length_19339_cov_40.995 AUGUSTUS gene 6311 10469 . + . ID=g1347;Name=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS mRNA 6311 10469 . + . ID=g1347.t1;Parent=g1347;Name=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 6311 6536 . + . ID=g1347.t1.exon1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 6311 6536 . + 0 ID=cds.g1347.t1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 6622 6972 . + . ID=g1347.t1.exon2;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 6622 6972 . + 2 ID=cds.g1347.t1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 7059 7129 . + . ID=g1347.t1.exon3;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 7059 7129 . + 2 ID=cds.g1347.t1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 7299 7393 . + . ID=g1347.t1.exon4;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 7299 7393 . + 0 ID=cds.g1347.t1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 7653 9365 . + . ID=g1347.t1.exon5;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 7653 9365 . + 1 ID=cds.g1347.t1;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS exon 9590 10469 . + . ID=g1347.t1.exon6;Parent=g1347.t1 NODE_662_length_19339_cov_40.995 AUGUSTUS CDS 9590 10469 . + 1 ID=cds.g1347.t1;Parent=g1347.t1 #PROT g1347.t1 g1347 MAPTSKSPSGGKRGGGGGRGSGRGGSGRGSARGGVGARGSRGGRGGRVDGVALPAEAELLLRLPAMAQLGRMRTVTDDDDEGSAFDLDAAPGGFGDAGFSSNVATYTQESSAEEDDDLDDGEEGASDGESAGAEDGNKSATKTAVRKTDKAGRKSSTATAGSDDDDEDAVDDAIIVNRAKRAKGKSGGFQSMGLSYPIYKAVIKKGYKVPTPIQRKAIPLLMDGKDIVAMARTGSGKTAAFLLPMLEKLKSRQPGVGVRGLIMTPTRELAMQTLKFTRELCKFTDLRCALIVGGDSMDAQFSSMHDGPDIVIATPGRFLHIAVEMDLKFPNVTYVVFDEADRLFELGLEEQLREILARLPEERQTCLFSATLPRLIVDFARVGLHDPALVRLDLDTKISENLKLAYLSVRKEEKPAALVHLVMRVIGIQPMTAEERVQKIEEDKDSGAKGKKGKKGKKGKKDGKKEDSKDADNDDEDGGDDDGDTQKKVAKASGVDAGGGSTIVFASTRHHVELLCELLAKAGVDASHVYGNLDQTARKINLAKFRMGRSKVLVVTDVAARGIDIPLLDNVINYDFPPKPKLFVHRVGRAARAGRSGTAYSLVAPDEFPYALDLHLFLAKPIILAVGNVDDLPDDSVMGVYPQGVMEDDLEFVRLAIETSSDLIALTRVVDNAYKMYLKSRPLPSSESVKRAKELMAQGQVCAHPIFKGRAGADKSYMDIINGVRNYRPAQTIFEINRSNKDAGALIMRGKRANDSKSIARKHEDLKAQIEFQRRAAVDAYASDDGDGDDATVPNVGDDAPTKKRKRGAAATDDDIVTAFDVVVGQRKKPRTTDTTTLTTGFGAKDQDDTPGTRGIRDDEHFIRYKPADHNAEKALSVRERTVGGFESFRTAADTAVMEVAGDDGETIKRERNQMKWDRKKKKYVRESDFDQGPSKKKIRTESGAFIPATYKMNKYKEWKERNRVHGLPSGVVPTAATVSFDDDGNEDEGGDKKRRGGHSGGRGGKGSKGKGAGDRGDRGDRGGDGNEARSPRGSGGRGGRGGRGGSSGGARGGRNAGGASATGGSAKKSPRSELKSKEQMLKVRKVKDAQSKRIREKHRREAIRGKGKKK* # ORIGINAL: g10451.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 45 1249 . + . ID=g10451;Name=g10451.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 45 1249 . + . ID=g10451.t1;Parent=g10451;Name=g10451.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 45 1249 . + . ID=g10451.t1.exon1;Parent=g10451.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 45 1249 . + 2 ID=cds.g10451.t1;Parent=g10451.t1 #PROT g10451.t1 g10451 IPCTVQRHKQSLGPGAPFIALLWKGLPFIFEDPASWIQGAPVATNVSWAEIAKTALGIKLPVGFVPDNEHFNPKDTTLTPYCSDLLGRQLLSTRNFNLLPIVDVVIFDNPAFFSISHPQLGDALLKLVDIRLSPSQVFVLQFPSEPIEIHPDIATDAFLNRFNISFGYNRGYFDVYRPLIGYIETFNSLASYRSVPAFAFDDAVLRQMAGGALIAAMISNCRSSVPSPRFRYLEELMQYVRVDSFGKCLHTKDLSADVIAKYQINTKAGHYASDWKAIKRDVFSGYPFAIAFENANCFDYVTEKPIDPLASGAIPIYMGAPNIAEYLPPNSYINARDLSPRALADYLRRILSDNGLYQSFHAWRSSDPSTWVAQRNVRSYSTDMCKEISRFSEKCPGPTS* # PASA_UPDATE: g10452.t1, single gene model update, valid-1, status:[pasa:asmbl_7492,status:12], valid-1 NODE_463_length_23261_cov_42.98 . gene 2838 6675 . + . ID=g10452;Name=g10452.t1 NODE_463_length_23261_cov_42.98 . mRNA 2838 6675 . + . ID=g10452.t1;Parent=g10452;Name=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 2838 3558 . + . ID=g10452.t1.exon1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 2838 3558 . + 0 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 3675 3732 . + . ID=g10452.t1.exon2;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 3675 3732 . + 2 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 3873 4081 . + . ID=g10452.t1.exon3;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 3873 4081 . + 1 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 4191 4251 . + . ID=g10452.t1.exon4;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 4191 4251 . + 2 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 4358 5222 . + . ID=g10452.t1.exon5;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 4358 5222 . + 1 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 5348 5837 . + . ID=g10452.t1.exon6;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 5348 5837 . + 0 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 5964 6041 . + . ID=g10452.t1.exon7;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 5964 6041 . + 2 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . exon 6219 6675 . + . ID=g10452.t1.exon8;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . CDS 6219 6394 . + 2 ID=cds.g10452.t1;Parent=g10452.t1 NODE_463_length_23261_cov_42.98 . three_prime_UTR 6395 6675 . + . ID=g10452.t1.utr3p1;Parent=g10452.t1 #PROT g10452.t1 g10452 MHLEATGSSMTMETSSDLVDFLERFNAEQKNAPATFGIATNDVSDDEDGKKKKKKRTFPHPFLTAKKGIQQRKKAPEGPLEKIEENAKRNKKEGPKSPLPTEYVGILKGLANGWGTSRHSHTNHRNGALTSTFFQDPSVLGHSRETSLSSLDSSATSLNMKPPGQSVPTSAFHSRDSSISSALEFGALSLHSREPSFNDPTQSILHARRNSIGVPTPGSNNGGREGEKTSPYDSPVDESVPLPPGWEKGVTPDGLTYFINHMERTTTWVDPRTHRATLGTQQQLAAASPNHSLASPNHSRTPSAEHQRQHQSLPKKWEFVVVDPTNTEQLPLPPNWEQGVTPDGMIYFINHATQTTTWTDPRTNIDMQELYLKQSRGPQQRKAPPNASMQHVAPQMQHIQQQQALQQQHEIEQHHQQQQQQHQQQHRDQQREQQQQQQQMRSGGGSPGHHTPQQIQIPGGRKRGNSSTQMGAGGMSALEHQQLMQQQQQMQQMVAQHAAQVAQQQQQQQQQQQQQQQQQMHQHARGHGQHGMQHGLSAAGAGTQFKRSPSLPVFNAHSPGSQPGVIHQRQHSSGPQPRAPLKDGSVSTRGSVSGHGSPAEDLVFDGDDASVLGINESMLRQMSQEARDAHLIRLQRLQLQRERLKLEQYQLMQQEYTVQRELETLQMSMSAQQQQQQQHQLQQLQMQQQQQQQHHHHHQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQHSLQIAKAAPGGALSPSERTLGGGHDAAVSSPVPQVLVASAESAEVNMTRGQEQQYPVSNVGIPLKTLTEMDDISAAESMMDCFDANALFPDAKMMDDGDAFGTGAMTGADFMGSIDAVLGASDSMFVDPASIGDLLDMKNEGQFDPSFMWLDWKN* # ORIGINAL: g10455.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 12682 14456 . + . ID=g10455;Name=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 12682 14456 . + . ID=g10455.t1;Parent=g10455;Name=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 12682 12714 . + . ID=g10455.t1.exon1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 12682 12714 . + 0 ID=cds.g10455.t1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 12964 13053 . + . ID=g10455.t1.exon2;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 12964 13053 . + 0 ID=cds.g10455.t1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 13162 13234 . + . ID=g10455.t1.exon3;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 13162 13234 . + 0 ID=cds.g10455.t1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 13326 13480 . + . ID=g10455.t1.exon4;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 13326 13480 . + 2 ID=cds.g10455.t1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 13575 13619 . + . ID=g10455.t1.exon5;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 13575 13619 . + 0 ID=cds.g10455.t1;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 14013 14456 . + . ID=g10455.t1.exon6;Parent=g10455.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 14013 14456 . + 0 ID=cds.g10455.t1;Parent=g10455.t1 #PROT g10455.t1 g10455 MWEAVDVRPSEEDDDAANALDFDDYTSAAAPAASMDIHIPSNNIGYKLALKMGWRAGAGLGREGQGRTDPIRLDFKQDTVGLGRWEMEGEMAEKTTEKRRLLEAEMEITPELQQKWQAETEKKEAITTELKEEMREREAKRNQGDAKKRQIKQEEKELKRLHDLANAMASRQHKPDAHPPPPPLHSENEAHASQQPLSGHAITGGFAAPPPTRPHSDGGDPTLLGTLATQQQPESVAVDGIAQVPTDTAPRMAVSFSLGSKTDEASRPPIKFGFGFKKK* # ORIGINAL: g10453.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 6792 9864 . - . ID=g10453;Name=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 6792 9864 . - . ID=g10453.t1;Parent=g10453;Name=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 9289 9864 . - . ID=g10453.t1.exon1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 9289 9864 . - 0 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 8859 9035 . - . ID=g10453.t1.exon2;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 8859 9035 . - 0 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 8512 8645 . - . ID=g10453.t1.exon3;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 8512 8645 . - 0 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 8301 8391 . - . ID=g10453.t1.exon4;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 8301 8391 . - 1 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 8006 8128 . - . ID=g10453.t1.exon5;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 8006 8128 . - 0 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 7721 7871 . - . ID=g10453.t1.exon6;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 7721 7871 . - 0 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 7415 7490 . - . ID=g10453.t1.exon7;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 7415 7490 . - 2 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 7236 7304 . - . ID=g10453.t1.exon8;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 7236 7304 . - 1 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 6984 7079 . - . ID=g10453.t1.exon9;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 6984 7079 . - 1 ID=cds.g10453.t1;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 6792 6879 . - . ID=g10453.t1.exon10;Parent=g10453.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 6792 6879 . - 1 ID=cds.g10453.t1;Parent=g10453.t1 #PROT g10453.t1 g10453 MDSDDDATTTAKRLKRPVVETQQGEEDESEGIEGAGNEEVGDESSSDDVEVGEDPGTGNANVAAQRRRQKVSVLGDKPPQPIGAFEELTDRFSVKRHVLNNLAAAGYTAPTAIQSHALPIMLGGRELLACAPTGSGKTAAFTVPIIAHLAEPKAVGFRAVVVSPTKELAQQTYREFVKLSHGRKFRMCVLTKAMVAGADFGHSSAQRFDILIATPLRLVNLIKEDHIKLSGVEWLVLDEADRLFDLGFLEQIDEIIHACSGMSIRRALFSATMPPHVEQMARSFLVDPIRVTVGAKNSATETINQRLLFVGREDGKLLAMRQLTQEGLKPPVIVFVQSKERAKELFHELVYDGINVDVIHADRTQAQREAIVKNFRIGKIWVLIATDLMSRGMDFKGVGMVINYDFPQSAVSYIHRIGRTGRAGRPGEAITFFTEDDAVNLRSIVNVMRDSGCDVPEWMLALKRPSKKKRKQLEKRPVARDHIKTITKYDAQKISKKRQMVDASKRRAGAQSEGQAPVSDDVDASD* # ORIGINAL: g10454.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 10630 11112 . + . ID=g10454;Name=g10454.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 10630 11112 . + . ID=g10454.t1;Parent=g10454;Name=g10454.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 10630 11112 . + . ID=g10454.t1.exon1;Parent=g10454.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 10630 11112 . + 0 ID=cds.g10454.t1;Parent=g10454.t1 #PROT g10454.t1 g10454 MDNLWNGGITPAVNLSDSLKQMLRIASDEANRSVYITRFDDVVPTKTPDANEDIVVHAWLRALEIMLQPSPPPRRGEGLCAGISIHAQKVMPLTEAFLTSAGLLHVVTRNRSSGVFSVFCQNGLSISRRSFTICTPPPFPFLLAEVRLKIVRKGAITRTQ* # ORIGINAL: g10456.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 14640 15374 . - . ID=g10456;Name=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 14640 15374 . - . ID=g10456.t1;Parent=g10456;Name=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 15322 15374 . - . ID=g10456.t1.exon1;Parent=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 15322 15374 . - 0 ID=cds.g10456.t1;Parent=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 14841 15108 . - . ID=g10456.t1.exon2;Parent=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 14841 15108 . - 1 ID=cds.g10456.t1;Parent=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 14640 14693 . - . ID=g10456.t1.exon3;Parent=g10456.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 14640 14693 . - 0 ID=cds.g10456.t1;Parent=g10456.t1 #PROT g10456.t1 g10456 MNAPDAFESFILAGGEKKITYEDDTKIPNAGTFQVNKEDHTLGNLLKYQLLKDKRVLFSGYRMPHPLEHRFLLRVQTDSKEYTPVMAVENAIRLLIRDVAAIEERFKVEVNRKAPDGVDREAFI* # ORIGINAL: g10457.t1 original gene structure, not modified by PASA NODE_463_length_23261_cov_42.98 AUGUSTUS gene 15860 22876 . + . ID=g10457;Name=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS mRNA 15860 22876 . + . ID=g10457.t1;Parent=g10457;Name=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 15860 15907 . + . ID=g10457.t1.exon1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 15860 15907 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 16084 16162 . + . ID=g10457.t1.exon2;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 16084 16162 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 16325 16524 . + . ID=g10457.t1.exon3;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 16325 16524 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 16932 17000 . + . ID=g10457.t1.exon4;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 16932 17000 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 17383 17517 . + . ID=g10457.t1.exon5;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 17383 17517 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 17661 17823 . + . ID=g10457.t1.exon6;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 17661 17823 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 18008 18111 . + . ID=g10457.t1.exon7;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 18008 18111 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 18401 18512 . + . ID=g10457.t1.exon8;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 18401 18512 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 18743 18922 . + . ID=g10457.t1.exon9;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 18743 18922 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 19118 19287 . + . ID=g10457.t1.exon10;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 19118 19287 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 19496 19648 . + . ID=g10457.t1.exon11;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 19496 19648 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 19823 19951 . + . ID=g10457.t1.exon12;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 19823 19951 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 20204 20417 . + . ID=g10457.t1.exon13;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 20204 20417 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 20861 20962 . + . ID=g10457.t1.exon14;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 20861 20962 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 21186 21283 . + . ID=g10457.t1.exon15;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 21186 21283 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 21600 21708 . + . ID=g10457.t1.exon16;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 21600 21708 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 21937 22035 . + . ID=g10457.t1.exon17;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 21937 22035 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 22195 22338 . + . ID=g10457.t1.exon18;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 22195 22338 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 22473 22549 . + . ID=g10457.t1.exon19;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 22473 22549 . + 2 ID=cds.g10457.t1;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS exon 22709 22876 . + . ID=g10457.t1.exon20;Parent=g10457.t1 NODE_463_length_23261_cov_42.98 AUGUSTUS CDS 22709 22876 . + 0 ID=cds.g10457.t1;Parent=g10457.t1 #PROT g10457.t1 g10457 MPPLPPKEQGVFKQILKFYETKQYKKGLKACDSILKKYADHGETTAMKGLILSCMGPEKKEESYTLARLGLRQDLKSHVCWHVLGLLYRQDKNYEEAMKCYKNALRQDKDNMQILRDLSLLQVQMRDLDGFMQTRLQLLTARPSQKISWIGLVVAYHLRKDYDAAIQCMTSYETTQETESTTPDHFDQEKSELILYKFMILEESGRHQDALDAVFKQQAAVCDKRAVKEIKARLLLKLGRKDESAAIYRALLKENPDNRDYYTGLEEATSATEGDARLKLYEELRSTFPRAGFPKRTPLDFTTGETFAALLDAYMRPLLRKGIPSLFNSLRGLYTDAAKVATIESIAVGYRTSLKAVGKFSNSESAPEEPPSTYMWSLHFLSQHYDALGRTSDALACIEEALLHTPTLIDLYIVKARVLKHGGDIQQASLVMNEARELDTADRYVNSKCVKYMMRADKRTEAEQTIGLFTRDGVDQADNLTDMQCMWYELECGESWRRSGDTGRALKQFHLVEKHFGDITEDQFDFHSYCMRKMTMRAYIRLVRLEDRLRGHRFYVKAAIDAIGCYLAIFDRPPALDSASHQGIDPNLSETEKKKLLSKQRREKAKNEAAAAKEAEDKKNAATKSDAKGEKGAAKKPVKAEDPDANGELLLKTADPLGEAIKFLRPLQLLLSGEVRTHLLAYQIYKRRGKPLLILQSLRRAHHVDPTNAELHHNIVEFASHFAARKDVHAAVREVVDSELKALLGGLDVKSFNTKFLAANTSSLVHQLHGGLASVIVDASTAAKVVATITKTDGSNATAIHAALAGPLKSVAGAADAYRTTCHALFPAAVHFGAVSKGPAAPSAAPESSA* # ORIGINAL: g8912.t1 original gene structure, not modified by PASA NODE_5097_length_1025_cov_25.0611 AUGUSTUS gene 229 732 . + . ID=g8912;Name=g8912.t1 NODE_5097_length_1025_cov_25.0611 AUGUSTUS mRNA 229 732 . + . ID=g8912.t1;Parent=g8912;Name=g8912.t1 NODE_5097_length_1025_cov_25.0611 AUGUSTUS exon 229 302 . + . ID=g8912.t1.exon1;Parent=g8912.t1 NODE_5097_length_1025_cov_25.0611 AUGUSTUS CDS 229 302 . + 0 ID=cds.g8912.t1;Parent=g8912.t1 NODE_5097_length_1025_cov_25.0611 AUGUSTUS exon 501 732 . + . ID=g8912.t1.exon2;Parent=g8912.t1 NODE_5097_length_1025_cov_25.0611 AUGUSTUS CDS 501 732 . + 1 ID=cds.g8912.t1;Parent=g8912.t1 #PROT g8912.t1 g8912 VTDFGLAVHLTNSDAEWFGFSGTPGYISPEVLKRVPYGKPVDMWACGVILYILLAGYPPFWHEDRQKLYSLIILGEYDYPSPDFDDVTPAARDLIDKWVVC* # ORIGINAL: g4184.t1 original gene structure, not modified by PASA NODE_3657_length_3015_cov_40.5854 AUGUSTUS gene 374 1583 . - . ID=g4184;Name=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS mRNA 374 1583 . - . ID=g4184.t1;Parent=g4184;Name=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS exon 1206 1583 . - . ID=g4184.t1.exon1;Parent=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS CDS 1206 1583 . - 0 ID=cds.g4184.t1;Parent=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS exon 748 1032 . - . ID=g4184.t1.exon2;Parent=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS CDS 748 1032 . - 0 ID=cds.g4184.t1;Parent=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS exon 374 547 . - . ID=g4184.t1.exon3;Parent=g4184.t1 NODE_3657_length_3015_cov_40.5854 AUGUSTUS CDS 374 547 . - 0 ID=cds.g4184.t1;Parent=g4184.t1 #PROT g4184.t1 g4184 MEAALAQLDAATRETLHISNDGHLACTKCDCVVWKASSAWNAKAIKQHLKSKTHKRSAVGAAAGRKGRSLKHGPPRKRKDASEEEEDEASDCASGASGAESDESENGADGTDCDRRPPKRLIPDGRCALCYLCGNNDNDAKIHFGSEDSNAVIVSNNSSNAPSALDGDATSSSGVNGTQEVRVAAWACIPPPITDNPSIESAAPFLTRRNPELPVYPRNVQDARDLYGKGNSRGRIPNIDVNNQSVKIESFAHCRRVLSDIAAENSAFVHLIVCCTWD* # PASA_UPDATE: g11056.t1, single gene model update, valid-1, status:[pasa:asmbl_8963,status:12], valid-1 NODE_701_length_18866_cov_55.9521 . gene 16501 18847 . - . ID=g11056;Name=g11056.t1 NODE_701_length_18866_cov_55.9521 . mRNA 16501 18847 . - . ID=g11056.t1;Parent=g11056;Name=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 18842 18847 . - . ID=g11056.t1.exon1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 18842 18847 . - 0 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 18515 18642 . - . ID=g11056.t1.exon2;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 18515 18642 . - 0 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 18302 18393 . - . ID=g11056.t1.exon3;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 18302 18393 . - 1 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 17850 17935 . - . ID=g11056.t1.exon4;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 17850 17935 . - 2 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 17481 17661 . - . ID=g11056.t1.exon5;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 17481 17661 . - 0 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 17073 17183 . - . ID=g11056.t1.exon6;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 17073 17183 . - 2 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . exon 16501 16751 . - . ID=g11056.t1.exon7;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . CDS 16645 16751 . - 2 ID=cds.g11056.t1;Parent=g11056.t1 NODE_701_length_18866_cov_55.9521 . three_prime_UTR 16501 16644 . - . ID=g11056.t1.utr3p1;Parent=g11056.t1 #PROT g11056.t1 g11056 MCKRGLLLDFIERFTKERITLADQAISKFAQQKINDGDVILIYASSHIVQKLLIDAHDEGKAFTVIVVDSRPRMEGREVLRRLVKHGLQCSYVLINAASYVMKKVSKVFLGAHTILANGYVMSRVGTSVIAMLAKSYNVPVIVCCETYKFCERSQTDSFVFNELGDPDDLVRNDGDENTGLHKSLANWRSIDSLKILNLVYDVTPPHFVDLAITEVGMIPCTSVPVVLREYFSSTQ* # PASA_UPDATE: g11055.t1, single gene model update, valid-1, status:[pasa:asmbl_8962,status:12], valid-1 NODE_701_length_18866_cov_55.9521 . gene 8430 16136 . + . ID=g11055;Name=g11055.t1 NODE_701_length_18866_cov_55.9521 . mRNA 8430 16136 . + . ID=g11055.t1;Parent=g11055;Name=g11055.t1 NODE_701_length_18866_cov_55.9521 . exon 8430 10532 . + . ID=g11055.t1.exon1;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . CDS 8430 10532 . + 0 ID=cds.g11055.t1;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . exon 10747 14394 . + . ID=g11055.t1.exon2;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . CDS 10747 14394 . + 0 ID=cds.g11055.t1;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . exon 14719 16136 . + . ID=g11055.t1.exon3;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . CDS 14719 15822 . + 0 ID=cds.g11055.t1;Parent=g11055.t1 NODE_701_length_18866_cov_55.9521 . three_prime_UTR 15823 16136 . + . ID=g11055.t1.utr3p1;Parent=g11055.t1 #PROT g11055.t1 g11055 MAAESPGMALCSVRIVEADFYMAPPLPGFDVCSTTDNATHKHGAGRPSNNARVPVIRIYGSTPAGQSACVHVHGVMPYLYIPYYGPLDSEASVRDYCARLASSIDRALDVSLQRERAVGGHVFSAFLVRGTPFYGYAPGDANFVKIHLRNPVLVGRTASLLQTGAVMGRELPPHESHIPYVLKFMIDYNLYGMNFIDFGGVKFRKPVLSISETFSPPYARLSGNTPISSSGGSLGGENRPKMVWTDEVVAARGLYGPVGAIRQSTCNIELDAIAADILNRKQVDVGMFTSIRAPAETQRPGPTELQLVRSLAGMWEEERMRRRSMGLGSQPTQPSTQDRDEHRPGERERSVLAKLRDYVLQETNIDRIDGDERSTERLGDDLGAAGGRSEGPGDFEAPTAYASPPFRTFGEAGVYGTHSPRHEQAGRGGVRVDDTNNLDGFFEKAMSAAHVLCSQDAGDGGIRDSVHIGTQSNEPTDHVTWAAKWSHREQNVGHFAAVDGARLLPPDVDERRLELTLLDVERETEDMLRLMAAGDDEEDGNAAEDVYDPQELHVAQFNGRGVSDGIIEEDRDEGFAALVGGGDGDNGDGGEYARVCVKPSLGNLGDGLRSRKSRSDGKWVVGDRGSSEDVSEDNGDELLAHVTMPDDEMSVDTRDHDRGEDLPQYDGPADTPGGARVNADASGGRRIRTTATTTATTTATRATPSPTIIPATVMGDDMLPLPRLSMWSPIGGSSSNVTRTGILPEGVSPPRVLSSPTQLSPLPTKFGAPARLSSLFGIIEDPSTPDEVLASPNWVPESPINDVRMDDAVHRGAEESAGVRATPDMECIRETQDSNTVVKETQEMPAQAAVDDSADTRPPLSVRMTLQDATVDRGASIIADGGYADFDKFVDQVHMRCDETLDDFVSVASAPGEGAVAHGYLTGGHVVAAPASVRSDAASWNSGSSALIQSGTTPKKTRFHVVEGDPASQNSIATGARKSVGGGMASSQVSSESRPSRQSSLHASGHISEKPVTSENGDALAWLVDWPAHSIGRTVSVAMTPVVLPPNPAEVVQSLTEVYGLPAVVYPEPFYGNPDDVPPRIVALGGQEFRFKAQTVASLKEFCGVDCRAAGHVHSTFAPNLARGVRAWAPARLPPSPRDVRLWAEHSGVTRAFVGADTNPKSRTVAHAAVSANVDCEMERENVAASTLTLQSKKRRTEDDASGPPSKILRSACDSPLTLRGEAGSAEPDVAAVKPRGPADGPAAGHVPPRDRAAPLSADIRPTNVSQIEGPTLLHSYGCKGSGGYGDVIRKHQDVQHVTAVYLEVHGASRGDLLPDPLHDAALAVFYCVRKDDPLAPTGLRISVGVIAVSDDVPQPRAPNMANVTPVTPAVNARESAAPSSVSGQHWQYVGGMPWDDVPDEKALFARLIHRVREWDPDILGGFEVQMSSLGFLVDRAKHLGIDLCSELSRVPNLGDSGFDKEADPYAYAHTSGLRIAGRIVVNAWRVARGEIALNIYSFENVAFHALRRRYPCYRQPTLKSWWTYAGDPRTPVAASAREDTARVNGADSVADGNSVGMHARSGSRLKRWRAVRYYCEKVRATCDILEHFDFIGRTGELARVFGILFAEVILRGSQFRVESMMLRVAKPMNYIAVSPSKKQVTSMRAAECVPLIMEPQSRLHTSPVLVLDFQSLYPSVVIAYNYCYSTCLGRASVRQERHLGVTSVTADPTLLRRMMDQGRHRKADGADGDTRGDTRGDARGGDGGREGNEGGEGDAAETGGLRVSPNGIMYCGRNVRVGVLPRMLEEILRARVMVKDAMKRHKGNRELYRLLDARQLGLKMIANVTYGYTSATFSGRMPCVEIADSIVQTGRQTLERAIQMVNEETKWGARVIYGDTDSMFVLLAGASRERAFEVGKEIAERVTAANPWPVKLRFEKVYHPCILEAKKRYVGAKYESPSQVEPEFDAKGIETVRRDTCAAVAKMLERSLKIVFATKDLSQVKAYVMRQWTKLVEGRASIQDFVFAKEMRELEGYKDPLMQPVALLALKARERDPRAMPRRGERVRFVVAHGPPNSRVIDGVRRPEELLYDPSLRLNANYYIDHQIVPALERALGLAGADIRSWRAELPRVQRSLTSASLQAAPADVRPPVAVYPPRAPTHKRKKDREPAGRTLPHFFSSVHCAACDAVCTKPTQAVPAFWRIGNGGEMDGSDARLRALGVSLCEQCQMSRQEACAAMSLRARAIQRAASHVRALCVECTGNAESALACTSLDCPVYYERVKATHKLAEADKCLRAAEVLDDMVA* # ORIGINAL: g11054.t1 original gene structure, not modified by PASA NODE_701_length_18866_cov_55.9521 AUGUSTUS gene 61 8073 . + . ID=g11054;Name=g11054.t1 NODE_701_length_18866_cov_55.9521 AUGUSTUS mRNA 61 8073 . + . ID=g11054.t1;Parent=g11054;Name=g11054.t1 NODE_701_length_18866_cov_55.9521 AUGUSTUS exon 61 8073 . + . ID=g11054.t1.exon1;Parent=g11054.t1 NODE_701_length_18866_cov_55.9521 AUGUSTUS CDS 61 8073 . + 0 ID=cds.g11054.t1;Parent=g11054.t1 #PROT g11054.t1 g11054 MLRRFALVAVASALLVATVVSAAQKSSNGLCSGAIPERKLGAGPVSHNDPKGFTLNGIFDFSSDDEASIDYSAESLKDCLPAFNIPEANGYDSFHSFRPDKDFTYTFSLCPNQDPKTPDQLGLVLFEAESCSESPKCPENIAVSWEGNTQKCHGQTVVLARLEAGKRYYLAVINTADDATRGYEVEVTRTLCDDEGAVVCESNNWAKSQLCNPNYNLVDDTCKRPVTLTRQETVPVEGEGYTFVIDVDGVDITEPVLESEVTWYFRHERDAEPTKLTDHPITKGSNSPPLAITVRDGDSKNQLFVLSAYSNWLKYYFSASVTRDDVTYTTAEYQIDISALRIYTSQPSTLETGRKISEYWSANFDYPAFERTIISTVDAAVTSGDDPRAFLTSPDYATMVGEANGAVVSLKKNVAASFVSAEDTIRDMGNQYFTVVCDHVVLKFKFLGSALATDVNRVAHIRSTLTAALLAANGETPANAPAQFSVRITNPMSGANADYEVNLFAMNWRTGKPVPASTIVSAIAWNGQVGSNSRSIFTASIVGAIDTGTTTVVGGTASPTFCTILASENGYVRTRADKFSLVTKSPSNSFEAGARWAIEDIDVDPKTLEAPYSRRVVFKSLDTAVAFKNLYLAASTGPFTWKFVADQKNALKFDITTDTTWFILNGGDSKRIQYVSTKCSVRDFGTVTASLDAGVSSCRFQSNNGQTSYGNDPTYRRYEIDLAGEFSVNAVRLSSPVYAVLTDTPAKRSLNLAAKLAAADDYKLLSPAISTSETTRCTKSFGCYQFKGTGAIFFDTIKYSRSKSFPGGIRDGMLGWRYFRLEFGDMQSDSTILAFDLRFFTIERLKMEGVCACNGHSAGCDLANGLCASPVTGANGENFGWTAALALPYAAQSEGKDLINGCQHRTSGNKCDVCEPGYFPGTTTINRGFPNTKYAKIGNPSLPVVTPTELFDRSFKYYDFDLFPGFDSQPFPMLEDPSSYSDAEAVSLIFTYFFNDVTCKSCFCYGLAVGQWDDTPFSSTVPCDAQTGVCNCHPDTNTQGNSCETCNAGFCRPLCYDDSNRDACLQAPCVGCKCNQHSINRIVVGGEFKTDLCNADGCGCTCDPAHNVEGAFCQDCKFGYFSPDGTGLDGQVCSACACYGHKDSSSIKDGGESCNVFAGDCMTDWYGNKEPCEDNTFGAQCETCIPDFYRPFNPAGQTFDVDLRDGCSECDCGPSAKQVEYTNGEHGWKEGSTASCEVNGGECFCDPDKFVVHSDDGKCNKCMDGYWRSQEDEDAGVACQPCECNDHKSSVNNMCNPRTGVCPYDGKTCEDNTQGDHCEECKDGFYRAKGAALTVGCIPCDCTGNGDKLASGADTCNKDGGVCNCDAATFTTGDHCDECIDKYFNIRTPKRSLLKGEKCSSCLTERCYTHTDTCDKWTGLCSNCGDNTQGIRCQNCKASNKRDLSLVNFIIGSKFTYTFTADNLETLKSVKCVACTCNSQSTTCDATTGECTNCGGNTENSVAVRECDECKDKFFRRITTVPDTCNVFGLAPSVVAGQTLASACSPCQQQCFLVGASATCDANNGVCSSCPTGYEGTRCERCASGYFGAPQVGIPCQVCSCFKHASARNFANVASATIGVLPKCQHTNNPALSNFCMLEIGTMSNAQITNVVGNPALAYNFIRCACDQETSAPATNFATGLLINDETIYRGRQCSDCNPQRYFGIPTTPIPLTTDFETCENCVCFKNIDLNSGADNCVITKEDQQCKNCLGQTTGNDCGSCNPGYYGDAKRQDVNVLVGGNPGKCFKCQCNGQSTVRAVANNLISGDTCTATKASLINAGDYKCTCNTGYTGAFCDECATAYQRSTQVGADGRTYVICTACDSCTLQLLNEVVNPNEVRLKTAETAFAGFSATVAAVVGLDGSILNNQLKAFDDSTTTLLGDAGNVLDLAVAYSMTVAESSTDASDKYAEVQTSLNAYEARQAAVLDDLTADIAALEEVKQLSRDEYESNKADVDSVSVDSEGTMTGIQELFVTSSEQFDALESIKATVKDNADALALNTFNILELSNDTMSLDDRVAAVEFIQGTDAEDRISAVESNTNSKSIDVAGVRDLLSKQAAAIAALIADIQAAESTVDGIDETINEKVDDAIKNLDATLAEIDDRVTELERLTTACAKKPCPGNKLCRNVVSDSGFECYCGGTDVETADGCVDTSNKCVVNGAPVCANGASCASFVDGFECSCTAGWRGVTCKTPYRPCDSSPCRNGGVCSVSPIDKESFVCTCAPGLTGALCQYREGYIFDGQAFVGFTPPATFRNFKVAFTLSTKASAGVIFSTYRASPASSDHVVIYLSGGRLVFGFAPAVYSCNADATTCPGATIARPASAIVNDGKSYRVTLTIAKNIVNYNVVLVSSQNSIASGELDIAFVGGSLIDTTGPLFFGRLNPAAQSSLFPRYVRDNVGFVGGLWSVVINLDGSADVPYKLAAGSPNIVANEVSNPGPIFGAANAPGERINFASSNGYARFLPRLLGDEFTVSVSLTATQAGIVFATASADGKDFAVLEVLAGGSLQFSWSSGGVTHVLPGPTVFDASAVVVTIDKTTGATEAGLGPRSSVTLSATVDGVPAADSVVDVAGPYASIDNTEGIWVGGGEAYPVAGSSTNTSLVGSVWALTVDGVRIASSSAVAFGEGTTLSA* # PASA_UPDATE: g10211.t1, single gene model update, valid-1, status:[pasa:asmbl_6509,status:12],[pasa:asmbl_6510,status:12], valid-1 NODE_3766_length_2793_cov_42.1619 . gene 200 2106 . - . ID=g10211;Name=g10211.t1 NODE_3766_length_2793_cov_42.1619 . mRNA 200 2106 . - . ID=g10211.t1;Parent=g10211;Name=g10211.t1 NODE_3766_length_2793_cov_42.1619 . five_prime_UTR 1982 2106 . - . ID=g10211.t1.utr5p1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . exon 1973 2106 . - . ID=g10211.t1.exon1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . CDS 1973 1981 . - 0 ID=cds.g10211.t1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . exon 1533 1740 . - . ID=g10211.t1.exon2;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . CDS 1533 1740 . - 0 ID=cds.g10211.t1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . exon 1085 1346 . - . ID=g10211.t1.exon3;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . CDS 1085 1346 . - 2 ID=cds.g10211.t1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . exon 588 894 . - . ID=g10211.t1.exon4;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . CDS 588 894 . - 1 ID=cds.g10211.t1;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . exon 200 352 . - . ID=g10211.t1.exon5;Parent=g10211.t1 NODE_3766_length_2793_cov_42.1619 . CDS 200 352 . - 0 ID=cds.g10211.t1;Parent=g10211.t1 #PROT g10211.t1 g10211 MAPRRCVVGAFVISAFLVVLYIHMRVPPRVVRAAVELLPDDVDKCGASEHGVWTGKACVCDIGWGGKACGNRVPPPIDRPADKIADAHVCFFTENFSRLTPALDSVYAAASSFAIRKLLAGLVTLGAHVRIAYVGREGFSEVAFAEAKGGFEKMGVKLVRVPAPLRQVGAEAAKRSYEAYRYLLSAPCDVAIFSERGGLGYYAAVGKTQGLFVGMHSPDIVVLAETTEAKQADWMLGSDGQRVYYIEPLTTTYMENTTLALADAVVRHPDLPHTEFIVTVVHTLSASGDIENALAGAFADWECVYQPFRREE* # ORIGINAL: g4978.t1 original gene structure, not modified by PASA # ORIGINAL: g4978.t2 original gene structure, not modified by PASA NODE_2180_length_7392_cov_42.1073 AUGUSTUS gene 281 1384 . + . ID=g4978;Name=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS mRNA 281 1384 . + . ID=g4978.t1;Parent=g4978;Name=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 281 363 . + . ID=g4978.t1.exon1;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 281 363 . + 0 ID=cds.g4978.t1;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 587 1004 . + . ID=g4978.t1.exon2;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 587 1004 . + 1 ID=cds.g4978.t1;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 1214 1384 . + . ID=g4978.t1.exon3;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 1214 1384 . + 0 ID=cds.g4978.t1;Parent=g4978.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS mRNA 912 1384 . + . ID=g4978.t2;Parent=g4978;Name=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 912 1004 . + . ID=g4978.t2.exon1;Parent=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 912 1004 . + 0 ID=cds.g4978.t2;Parent=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 1214 1384 . + . ID=g4978.t2.exon2;Parent=g4978.t2 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 1214 1384 . + 0 ID=cds.g4978.t2;Parent=g4978.t2 #PROT g4978.t1 g4978 MLSDRDFLSRDPGPGARHYDVRPYFNSKLICVAASLSGGNAFAAIAASVRDMVSSLGLAAPTKAEIIRTMCDEAEKQSIGTRSRSSSKASLRQEDVARPRSMSASSSTRSFKEKLRIMPLFWGERHDPQRRGSLSNMREGNFRLGDMYVATCDGLAEALAEILTPVDVANAGITRLIGSGNALLSSRLLREAMERMYGIPLVMGSGGDVQGAVGAALVAAQSC* #PROT g4978.t2 g4978 MREGNFRLGDMYVATCDGLAEALAEILTPVDVANAGITRLIGSGNALLSSRLLREAMERMYGIPLVMGSGGDVQGAVGAALVAAQSC* # ORIGINAL: g4980.t1 original gene structure, not modified by PASA NODE_2180_length_7392_cov_42.1073 AUGUSTUS gene 5337 7264 . + . ID=g4980;Name=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS mRNA 5337 7264 . + . ID=g4980.t1;Parent=g4980;Name=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 5337 5426 . + . ID=g4980.t1.exon1;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 5337 5426 . + 0 ID=cds.g4980.t1;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 5697 5873 . + . ID=g4980.t1.exon2;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 5697 5873 . + 0 ID=cds.g4980.t1;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 6119 7105 . + . ID=g4980.t1.exon3;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 6119 7105 . + 0 ID=cds.g4980.t1;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS exon 7259 7264 . + . ID=g4980.t1.exon4;Parent=g4980.t1 NODE_2180_length_7392_cov_42.1073 AUGUSTUS CDS 7259 7264 . + 0 ID=cds.g4980.t1;Parent=g4980.t1 #PROT g4980.t1 g4980 MAQKIASLPAVPTGPLLASGSLEVYGRKLKEASPDGDRLQLVSEIRDFIEIVHTLEYANFLRFLLPEFITILREAKETKIDLDPESKAQKSRNLILETINLLPLNELLRQYVVELMRTIMDVIEFETEDNALICLRIANELHKTYRPILQGEVQRFLEFALKLYKNLSSTDIVFDPKKTSLLQPQTAAPAQNPLGIAPGGQGGASGGIQQQQQQQQQQQQQQQQHQQQQQHQQQQQQQAPSPQPQTVGTPPALGQAPGGAPSGTQTAPVAGRTMLIRSIYSFKVLTETPIIVVMLFQLYKNFSPQHAPKFISPIMKTLMLPLKTETMRRQGLNRLAYGDVIAAQVKTLSFLAWLLRQTPDPIRQYQEKIPVIVVSLLTNCPSGSVGIRKELLIAVRHILSTDFKAAFAQHIDALLEEKD* # PASA_UPDATE: g4979.t1, single gene model update, valid-1, status:[pasa:asmbl_3704,status:3], valid-1 # PASA_UPDATE: g4979.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3703,status:3], valid-1 NODE_2180_length_7392_cov_42.1073 . gene 1863 4500 . - . ID=g4979;Name=g4979.t1 NODE_2180_length_7392_cov_42.1073 . mRNA 1863 4500 . - . ID=g4979.t1;Parent=g4979;Name=g4979.t1 NODE_2180_length_7392_cov_42.1073 . five_prime_UTR 4061 4500 . - . ID=g4979.t1.utr5p1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . exon 4040 4500 . - . ID=g4979.t1.exon1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . CDS 4040 4060 . - 0 ID=cds.g4979.t1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . exon 3681 3851 . - . ID=g4979.t1.exon2;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . CDS 3681 3851 . - 0 ID=cds.g4979.t1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . exon 3460 3538 . - . ID=g4979.t1.exon3;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . CDS 3460 3538 . - 0 ID=cds.g4979.t1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . exon 3108 3263 . - . ID=g4979.t1.exon4;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . CDS 3108 3263 . - 2 ID=cds.g4979.t1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . exon 1863 2878 . - . ID=g4979.t1.exon5;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . CDS 2340 2878 . - 2 ID=cds.g4979.t1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . three_prime_UTR 1863 2339 . - . ID=g4979.t1.utr3p1;Parent=g4979.t1 NODE_2180_length_7392_cov_42.1073 . mRNA 1863 4500 . - . ID=g4979.t1.1.5b6be70b;Parent=g4979;Name=g4979.t1 NODE_2180_length_7392_cov_42.1073 . five_prime_UTR 4061 4500 . - . ID=g4979.t1.1.5b6be70b.utr5p1;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . exon 4040 4500 . - . ID=g4979.t1.1.5b6be70b.exon1;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . CDS 4040 4060 . - 0 ID=cds.g4979.t1.1.5b6be70b;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . exon 3681 3854 . - . ID=g4979.t1.1.5b6be70b.exon2;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . CDS 3681 3854 . - 0 ID=cds.g4979.t1.1.5b6be70b;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . exon 3460 3538 . - . ID=g4979.t1.1.5b6be70b.exon3;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . CDS 3460 3538 . - 0 ID=cds.g4979.t1.1.5b6be70b;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . exon 3108 3263 . - . ID=g4979.t1.1.5b6be70b.exon4;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . CDS 3108 3263 . - 2 ID=cds.g4979.t1.1.5b6be70b;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . exon 1863 2878 . - . ID=g4979.t1.1.5b6be70b.exon5;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . CDS 2340 2878 . - 2 ID=cds.g4979.t1.1.5b6be70b;Parent=g4979.t1.1.5b6be70b NODE_2180_length_7392_cov_42.1073 . three_prime_UTR 1863 2339 . - . ID=g4979.t1.1.5b6be70b.utr3p1;Parent=g4979.t1.1.5b6be70b #PROT g4979.t1 g4979 MHSLAHMQPHGLHSAGLSMGGPLSQQQQQQQQQREQPQSQAAQQGIIDKEKIYPLVLELTKTEQRESALLELSKKREAVPELAPILWHSFGTMAALLQEIVAIYPLLSPPALTAHGSNRVCNALALLQCVASHNETRNLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKTDDSDVVTFLLSTEIIPLCLRIMEQGSELSKTVATFIVQKILLDDIGLQYICQTYERFFHVATILGKMVHTLSKEQSARLLKHVVRCYLRLSDNPRAREALRQCLPEPLRDTTFANCLKDDIATKRWLGQLLVNLSDTGMPAQ* #PROT g4979.t1.1.5b6be70b g4979 MHSLAHMQQPHGLHSAGLSMGGPLSQQQQQQQQQREQPQSQAAQQGIIDKEKIYPLVLELTKTEQRESALLELSKKREAVPELAPILWHSFGTMAALLQEIVAIYPLLSPPALTAHGSNRVCNALALLQCVASHNETRNLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKTDDSDVVTFLLSTEIIPLCLRIMEQGSELSKTVATFIVQKILLDDIGLQYICQTYERFFHVATILGKMVHTLSKEQSARLLKHVVRCYLRLSDNPRAREALRQCLPEPLRDTTFANCLKDDIATKRWLGQLLVNLSDTGMPAQ* # ORIGINAL: g9029.t1 original gene structure, not modified by PASA NODE_3688_length_2954_cov_40.6138 AUGUSTUS gene 472 2777 . + . ID=g9029;Name=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS mRNA 472 2777 . + . ID=g9029.t1;Parent=g9029;Name=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 472 502 . + . ID=g9029.t1.exon1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 472 502 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 703 761 . + . ID=g9029.t1.exon2;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 703 761 . + 2 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 958 1074 . + . ID=g9029.t1.exon3;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 958 1074 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 1467 1571 . + . ID=g9029.t1.exon4;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 1467 1571 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 1853 1951 . + . ID=g9029.t1.exon5;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 1853 1951 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 2405 2497 . + . ID=g9029.t1.exon6;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 2405 2497 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS exon 2706 2777 . + . ID=g9029.t1.exon7;Parent=g9029.t1 NODE_3688_length_2954_cov_40.6138 AUGUSTUS CDS 2706 2777 . + 0 ID=cds.g9029.t1;Parent=g9029.t1 #PROT g9029.t1 g9029 PRATSQLRADDNIAKAYLFRTRDRIADTVEFYSAPSRELLLPDPLPEPYQRPYTLVLDLDETLVHSDWNKERGWRTMKRPGLNYFLAYLSQFYEIVIFSEKPYFYAGPILDKIDNQGCIMYRLFKDSTNYRNGTHYKDLTHINRPMSKVIIVDDDPRLYELQKENGIRIPAWKGDPNDRTLLEVIPFLESE* # PASA_UPDATE: g145.t1, single gene model update, valid-1, status:[pasa:asmbl_5072,status:12], valid-1 NODE_2817_length_5066_cov_40.5732 . gene 290 4387 . - . ID=g145;Name=g145.t1 NODE_2817_length_5066_cov_40.5732 . mRNA 290 4387 . - . ID=g145.t1;Parent=g145;Name=g145.t1 NODE_2817_length_5066_cov_40.5732 . five_prime_UTR 4362 4387 . - . ID=g145.t1.utr5p1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 4123 4387 . - . ID=g145.t1.exon1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 4123 4361 . - 0 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 3711 3846 . - . ID=g145.t1.exon2;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 3711 3846 . - 1 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 3337 3481 . - . ID=g145.t1.exon3;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 3337 3481 . - 0 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 2271 3064 . - . ID=g145.t1.exon4;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 2271 3064 . - 2 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 1642 1949 . - . ID=g145.t1.exon5;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 1642 1949 . - 0 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 1444 1487 . - . ID=g145.t1.exon6;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 1444 1487 . - 1 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 1133 1340 . - . ID=g145.t1.exon7;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 1133 1340 . - 2 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 718 929 . - . ID=g145.t1.exon8;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 718 929 . - 1 ID=cds.g145.t1;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . exon 290 502 . - . ID=g145.t1.exon9;Parent=g145.t1 NODE_2817_length_5066_cov_40.5732 . CDS 290 502 . - 2 ID=cds.g145.t1;Parent=g145.t1;3_prime_partial=true #PROT g145.t1 g145 METRPRMRSKEMHKVRIVACAACVFVVASLVAPVAEGLYRTQNGLLTDTLDASIDATYVFTGGLSSERFGHSIAYQASKRNLIVGAPYASSAEPSNPTWDTSVERRGRVYTFPSLVKSGSNFVEPPSMCTYRSHFGASVAAGTGVDYSGFVASAPTCTSGRTTVPVYAPIISASSGTEIQWGTACSAVSDGTFAISGLSSGNYFTAATIPRYRKNLQIQLRADSGVDFDLYLDDADCVRSGGTNCKSAGTTTFTTSSRYRVVGFYQAAKNSGFRSQNGLPSNVDGNGVSFSYGAAGDSYNPLSSPRLCAGCQSTPLRFYKGLLDSGNPCCDIDTSSENATPSPCNYDTMTYRGVSIQYSGHYCPLGGANSKGSCFSDCVSSDMCHLGWTGYYCNKPATPQGSSSNVEWIKITGTTDHVLQLYPMAFTAGSTKGTYSFASPCQSSENGRTFAFNTISNRVAVDLQASSSYRAYSFDASGQTVAVDARGTIFIGSSNRPAGIARGYVETFSSTLTYAGTVELDTTGRDGYQLSTASITPNNIRYGEAMTTGKFFTDYDVAIGSPRATRAASYASTATYNKNAFSGLVEIRSTTSTGSLTLAKWKAYGEQSGSSFGAALAVADFDGDGKNDLIVGAPTFIDTNVPDAGRVYVYLAPVNSNGAMNAVYSLFIKGSARGGRFGFALANAGKTRGTKSSYEDIVVSAPFAVKPNSAANEADHGAVYLYEGRSSPVSSNYAVPTQTVNGDVSGGLLGFSLGSGATVASASGIM # ORIGINAL: g672.t1 original gene structure, not modified by PASA NODE_5767_length_724_cov_25.527 AUGUSTUS gene 67 303 . + . ID=g672;Name=g672.t1 NODE_5767_length_724_cov_25.527 AUGUSTUS mRNA 67 303 . + . ID=g672.t1;Parent=g672;Name=g672.t1 NODE_5767_length_724_cov_25.527 AUGUSTUS exon 67 303 . + . ID=g672.t1.exon1;Parent=g672.t1 NODE_5767_length_724_cov_25.527 AUGUSTUS CDS 67 303 . + 0 ID=cds.g672.t1;Parent=g672.t1 #PROT g672.t1 g672 MTPDEEFVLDRHPSHPNIIIGAGFSGHGFKLAPVVGRILADMAGGRDVGYDLTPCAISKTLVKKSAKKTSRDKVASHL* # PASA_UPDATE: g4928.t1, single gene model update, valid-1, status:[pasa:asmbl_5335,status:12],[pasa:asmbl_5336,status:12], valid-1 NODE_2977_length_4619_cov_40.1173 . gene 54 3234 . + . ID=g4928;Name=g4928.t1 NODE_2977_length_4619_cov_40.1173 . mRNA 54 3234 . + . ID=g4928.t1;Parent=g4928;Name=g4928.t1 NODE_2977_length_4619_cov_40.1173 . exon 54 412 . + . ID=g4928.t1.exon1;Parent=g4928.t1 NODE_2977_length_4619_cov_40.1173 . CDS 54 412 . + 0 ID=cds.g4928.t1;Parent=g4928.t1;5_prime_partial=true NODE_2977_length_4619_cov_40.1173 . exon 653 3234 . + . ID=g4928.t1.exon2;Parent=g4928.t1 NODE_2977_length_4619_cov_40.1173 . CDS 653 2945 . + 1 ID=cds.g4928.t1;Parent=g4928.t1 NODE_2977_length_4619_cov_40.1173 . three_prime_UTR 2946 3234 . + . ID=g4928.t1.utr3p1;Parent=g4928.t1 #PROT g4928.t1 g4928 VPLFQNTEIGFMRMLSLVIKPILFLRREYIVNKGDVGNEMFFIHRGTVEVVSPDGKMVFAKMEAGAFFGEISLIFSCPRTASIRAATNCDLFVLTKRDLDEVLEYYPQITEQINLIASNRYNVAKKREESKDNQLKVVDADEVGGLRSNSVAVRKASSNDPPPMGLAVRERKVSHMTPVAADGERKSSHEKQLDAIPGSSADLAAGAKTGSVNALTNEPVAEEGEGRGDEGQVTVTVEEGRDKKSASIVRFNTGSPQGARSDSVASSHPERPPSQNSSLRAPASIPSISVTETPSSPVAPTSRLPPIEGGSSPRLPPLRGSEGAGVAGSAGAGVGGSSEQVSEKDGANEGDGEAVEIELQEVARAEDGEGDESDDETIEQAKEREEKEKKEKEEKEKKEKEEKEKKEKEEKERKERGPRDSTIAQDSLRFIREFFVTPQSRFASAWDLIGVFLATVMCFTVSYQASFDPASVPLWIINYVIELFFVCEIVIRARTAYVDENERLVSDRKSMLRNYARTTLWLDVLAAFPLDFFALIWTPQSRRLAVLSYFRLPKLLRAWGISKYFERQEKKLNIQRELLVLVKFTIMIALLAHFLTCIWFSIACGSERCGVNGWTFVHNLSHADSATRYVTSLYWTITTMTTTGYGDITPVTDSERVFAACVMLIGKLVFGFVLGSIASALANADSQRVRYEEKLRAVSEYMEDQSLPIPLRRRVEDYFVYLWQRNRGIDGKSLFTDMPFTLQAEVSLSINQSTIEKVPLFQNTDVGFMRMLCLVIKPYLFLPNEYVVRKGDIGQEMFFIHRGTVDVVSEDDPPKIWDSMHAGAFFGEISLIFSVPRTASIRAATHVDMFVLTKDDLDTVLQHYPTIKQSIQTIADERFQKRK* # PASA_UPDATE: g4929.t1, single gene model update, valid-1, status:[pasa:asmbl_5334,status:12],[pasa:asmbl_5337,status:12], valid-1 NODE_2977_length_4619_cov_40.1173 . gene 3439 4562 . - . ID=g4929;Name=g4929.t1 NODE_2977_length_4619_cov_40.1173 . mRNA 3439 4562 . - . ID=g4929.t1;Parent=g4929;Name=g4929.t1 NODE_2977_length_4619_cov_40.1173 . exon 4324 4562 . - . ID=g4929.t1.exon1;Parent=g4929.t1 NODE_2977_length_4619_cov_40.1173 . CDS 4324 4562 . - 0 ID=cds.g4929.t1;Parent=g4929.t1 NODE_2977_length_4619_cov_40.1173 . exon 3439 3958 . - . ID=g4929.t1.exon2;Parent=g4929.t1 NODE_2977_length_4619_cov_40.1173 . CDS 3853 3958 . - 1 ID=cds.g4929.t1;Parent=g4929.t1 NODE_2977_length_4619_cov_40.1173 . three_prime_UTR 3439 3852 . - . ID=g4929.t1.utr3p1;Parent=g4929.t1 #PROT g4929.t1 g4929 MSQLTPFAQKHAHLQRNAAGSGLPTWVFVVIFVLGFNEFVYLLSSPLLLILCILFGCGFYAIRALGLDGPVKNILRTVTREIVNNARPLAQTYVQQQPTARDRAASSSSKSKSD* # ORIGINAL: g9226.t1 original gene structure, not modified by PASA NODE_589_length_20527_cov_43.8992 AUGUSTUS gene 4685 6450 . - . ID=g9226;Name=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS mRNA 4685 6450 . - . ID=g9226.t1;Parent=g9226;Name=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 6445 6450 . - . ID=g9226.t1.exon1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 6445 6450 . - 0 ID=cds.g9226.t1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 5967 6104 . - . ID=g9226.t1.exon2;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 5967 6104 . - 0 ID=cds.g9226.t1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 5783 5857 . - . ID=g9226.t1.exon3;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 5783 5857 . - 0 ID=cds.g9226.t1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 5429 5583 . - . ID=g9226.t1.exon4;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 5429 5583 . - 0 ID=cds.g9226.t1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 5076 5161 . - . ID=g9226.t1.exon5;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 5076 5161 . - 1 ID=cds.g9226.t1;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 4685 4689 . - . ID=g9226.t1.exon6;Parent=g9226.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 4685 4689 . - 2 ID=cds.g9226.t1;Parent=g9226.t1 #PROT g9226.t1 g9226 MTSLVLPEKFQHILRILNTNVDGRQKIMFAMTNIKGCGRRYSNLVIKKADVDLRKRAGELTEEEIERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANALDNKLREDLERLKKIKAHRGLRHYWGVRVRGQHTKTTGRRGRTVGVSKKKN* # ORIGINAL: g9225.t1 original gene structure, not modified by PASA NODE_589_length_20527_cov_43.8992 AUGUSTUS gene 2806 4087 . + . ID=g9225;Name=g9225.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS mRNA 2806 4087 . + . ID=g9225.t1;Parent=g9225;Name=g9225.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 2806 2988 . + . ID=g9225.t1.exon1;Parent=g9225.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 2806 2988 . + 0 ID=cds.g9225.t1;Parent=g9225.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 3107 4087 . + . ID=g9225.t1.exon2;Parent=g9225.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 3107 4087 . + 0 ID=cds.g9225.t1;Parent=g9225.t1 #PROT g9225.t1 g9225 MATPTVRKTRIVILGGGFGGATLARELEKAHVSTKNNADVTLIDAKDYFEINIATLRTIVQPDITKRSLVKFSDFLKSTSLTVGVATNVTPTEVVLGNGTTVPYDYLVVATGARYGGFARTSVKDGVAGATSLDARIAQTKSLFERVTAAKSVLIAGGGPVGVELAAEIVVLAPGKKVTLVHSKNSLIDSVTNQKVGQYAQKWLQEHGVTVILGDRIPADQLAADPLGVRDAGKYRTEKGVEIEADVSFTAFGGRANTDAFREHFAAALDGNGSLKVDRNLRVAGHENVFAIGDVTDLKELKVGYLTVEHAKLIAGSLRKLLGAKDPKTAKLGTYSANTKTIMLVTLGPNEGMGHLPLIGFSKSGMVAGIKKDLFVGRFRKDVGLAN* # ORIGINAL: g9224.t1 original gene structure, not modified by PASA NODE_589_length_20527_cov_43.8992 AUGUSTUS gene 549 2311 . - . ID=g9224;Name=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS mRNA 549 2311 . - . ID=g9224.t1;Parent=g9224;Name=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 1859 2311 . - . ID=g9224.t1.exon1;Parent=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 1859 2311 . - 0 ID=cds.g9224.t1;Parent=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 1646 1758 . - . ID=g9224.t1.exon2;Parent=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 1646 1758 . - 0 ID=cds.g9224.t1;Parent=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS exon 549 1515 . - . ID=g9224.t1.exon3;Parent=g9224.t1 NODE_589_length_20527_cov_43.8992 AUGUSTUS CDS 549 1515 . - 1 ID=cds.g9224.t1;Parent=g9224.t1 #PROT g9224.t1 g9224 MIHDMESMETEAPVAGCHAGIHSGSFEHSEAGDAVTDALPVPDTCAAAEAEIAGVHPPQYDFSSPPRMIATSTETEFEWGNFLKVRSARDARTCDVLLQQMQHFFHRLTLSLNVLFFRAANGHLTAPACSPAVRTMLCDYSSCRVMAMKEKVMEPALRMREGETVYDYCWYPLMNVAEPATACVLSTSRDHPAHLWDAFTGTVRATYRSYNHVDEITAPSSLSFSLDGQKILCGFERAIRVFDTGRPGRDCRMISTVRKGYGQKGLISCMASSPVQPDYLAAGSYGRSVGLYDMRSDGALVCLVDVAAGVEAGGACRATGGGCGVTRLHFSPDGSLLYVGCRKAPFILVYDTRYLDSVVGIMHRPVSTNQRVDFDVDPHGRFVVSGTQDGCVSFFSPGGDVLHSDAYGASGVAAGVDSSVFHSFQAHCDSVNGVAVHPYLPLLATASGQRKFSLPANVHAASDISGETGGATDDANDAEWQDANYNDVRRCDNSVRLWSLGSCCSGSAAP* # PASA_UPDATE: g9228.t1, single gene model update, valid-1, status:[pasa:asmbl_8338,status:12], valid-1 NODE_589_length_20527_cov_43.8992 . gene 9000 10920 . - . ID=g9228;Name=g9228.t1 NODE_589_length_20527_cov_43.8992 . mRNA 9000 10920 . - . ID=g9228.t1;Parent=g9228;Name=g9228.t1 NODE_589_length_20527_cov_43.8992 . five_prime_UTR 10789 10920 . - . ID=g9228.t1.utr5p1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . exon 10470 10920 . - . ID=g9228.t1.exon1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . CDS 10470 10788 . - 0 ID=cds.g9228.t1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . exon 10239 10360 . - . ID=g9228.t1.exon2;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . CDS 10239 10360 . - 2 ID=cds.g9228.t1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . exon 9863 9973 . - . ID=g9228.t1.exon3;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . CDS 9863 9973 . - 0 ID=cds.g9228.t1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . exon 9000 9408 . - . ID=g9228.t1.exon4;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . CDS 9019 9408 . - 0 ID=cds.g9228.t1;Parent=g9228.t1 NODE_589_length_20527_cov_43.8992 . three_prime_UTR 9000 9018 . - . ID=g9228.t1.utr3p1;Parent=g9228.t1 #PROT g9228.t1 g9228 MADTQPPDPPQAVEQAAPKTNANKNKKKKDAKKKKQGLPPPSTTEGIAHGAAAQPTANVVHLTPASPSPASPNGTSKLDAAAKSKVTAPTTSTASAPKQSESEEAEGKSSFSDELAWCIKKIEAGLLSGSPDARQKSESEKAIVVLKSASAPLVKKRHTMQKYCGDYRKLMRDEAKAPPAVAVKENIRGMKIAPVATDKQQMRFFRVAKSSKAAIDTQNGTAKADAPVTAPQTEAAPTVSVGSDATHAPSPSADVSAGVSGGKSKSKGKGKKKKSGASSASGVTATAPTHSFPRTASLFGTAAVEGEFKFGFS* # PASA_UPDATE: g9230.t1, single gene model update, valid-1, status:[pasa:asmbl_8335,status:12], valid-1 NODE_589_length_20527_cov_43.8992 . gene 17742 20505 . - . ID=g9230;Name=g9230.t1 NODE_589_length_20527_cov_43.8992 . mRNA 17742 20505 . - . ID=g9230.t1;Parent=g9230;Name=g9230.t1 NODE_589_length_20527_cov_43.8992 . five_prime_UTR 20403 20505 . - . ID=g9230.t1.utr5p1;Parent=g9230.t1 NODE_589_length_20527_cov_43.8992 . exon 17742 20505 . - . ID=g9230.t1.exon1;Parent=g9230.t1 NODE_589_length_20527_cov_43.8992 . CDS 17742 20402 . - 0 ID=cds.g9230.t1;Parent=g9230.t1 #PROT g9230.t1 g9230 MSIGSVGPGRGFQVTGIRIPVDRETGAGITSPDIKMTLETSSDNITPASLTAKAPVVVTASTATLRATLSVADSIVAGTRITSGVVVENPSAALAWSVVATITADARLSLRKLSLRYPCDDPVVNAGGATASMACKLGRIANYASAPLDFALEAADDAHMTGAASASVNVSLAFNDIAARFVNDADAKIIALNAVSNLMIGAIAAAPTRRPFVPGRAFSVRVPITNQGPSRIASGKAELSLTFPTNAVAFVLASQPAGCSVKTAADKTSIVCALAELAPGVSLNNPFSLSVSPSFAYTTDKVRVTATITSTQTDPDAVNNAKYDEFTVDFTHDIKFVSVSAPTSERRVNQTSAFRYVISNGGVNPTPALGCALRVVVTPSRYNAADTLPIVIAQATGSDTCTSTYEGTNLAYACALTRAITNSTDRAIVSIGFYLTEKGRASVDAALSCPELAPGVPSDADTANSRSDAVNYIDFCMLSLSTRPIPDVSAIRPRYVLAGTLRNRAGAVCKNIVVNIATDGAGSQVNQQLSRDSVEGLGGVTYAFPSTSVVTITIANMTDTLSFSVVFDQTTFEVGSAVTLTATASTTTLNLGDSSLLTSRQVMTVGQAVVSAGIVSARTVPPQIARATNGWYLNGTEFKFAPVSTTTNVSFIFGVKNYAEPFDAAVGKKIQLQLQVSLQDFTGFSKVQTYAYSQGRYPTPADDLVIANARNGITPSYDSNLTASYMRDLFVGVVDSGTKKAQNCTTPLETGEITCTVPAIERNEQASYEVRLYAYNYPKLMGYKLVVTAQLSTVDGALFELASNRVQYRSLVLGVQSFQTFDSVAERSSAVTTSKTDTKTIIIAVVCSVVGIAVIIGVLWKIGFFARKPKPPALGHFNGIDEAYVS* # PASA_UPDATE: g9229.t1, single gene model update, valid-1, status:[pasa:asmbl_8339,status:12], valid-1 NODE_589_length_20527_cov_43.8992 . gene 11430 17204 . - . ID=g9229;Name=g9229.t1 NODE_589_length_20527_cov_43.8992 . mRNA 11430 17204 . - . ID=g9229.t1;Parent=g9229;Name=g9229.t1 NODE_589_length_20527_cov_43.8992 . five_prime_UTR 17012 17204 . - . ID=g9229.t1.utr5p1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 16730 17204 . - . ID=g9229.t1.exon1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 16730 17011 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 16408 16545 . - . ID=g9229.t1.exon2;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 16408 16545 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 16100 16204 . - . ID=g9229.t1.exon3;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 16100 16204 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 15748 15825 . - . ID=g9229.t1.exon4;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 15748 15825 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 15493 15630 . - . ID=g9229.t1.exon5;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 15493 15630 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 15207 15360 . - . ID=g9229.t1.exon6;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 15207 15360 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 14873 14973 . - . ID=g9229.t1.exon7;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 14873 14973 . - 2 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 14598 14677 . - . ID=g9229.t1.exon8;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 14598 14677 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 14296 14432 . - . ID=g9229.t1.exon9;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 14296 14432 . - 1 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 13984 14087 . - . ID=g9229.t1.exon10;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 13984 14087 . - 2 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 13750 13844 . - . ID=g9229.t1.exon11;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 13750 13844 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 13265 13478 . - . ID=g9229.t1.exon12;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 13265 13478 . - 1 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 12883 13018 . - . ID=g9229.t1.exon13;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 12883 13018 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 12587 12714 . - . ID=g9229.t1.exon14;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 12587 12714 . - 2 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 12241 12425 . - . ID=g9229.t1.exon15;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 12241 12425 . - 0 ID=cds.g9229.t1;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . exon 11430 12090 . - . ID=g9229.t1.exon16;Parent=g9229.t1 NODE_589_length_20527_cov_43.8992 . CDS 11430 12090 . - 1 ID=cds.g9229.t1;Parent=g9229.t1 #PROT g9229.t1 g9229 MATEHAEKAADLGPQHTIFESGGGLAKRIHIYRNGDRYFRGLDVVVTPKRYRTFDALLADLSVAVDLPTGAVRHIYTPVNGHRVNHLSGFKTGQKYVCAGPEKLRKMDYSKISLAKWVPYVKKIFGEDLNSSKNDPPNPKFSPPKLDRFRKAQLAPITRQPNATFFRPRVINIYRNGDPVGAAAKVLLNKKTALSFEQVLQDVSEAVKLDNGAVHRIYTLDGERVHDLSYLINESNPSDYVAGGREAFRKLRYGAAGALRTIEGSNNSSTNNSGKEHLNTTGSRKPPGRLEPIEKKKKEKRDDGIDSHADRLLQESEQAEKAASEERHRQREAGKSKIEKRQHTIRQADDILESHGAHRDKMESEKERQMRAMKEKIDIRKSFISSGDEGSARKRRRLEDEYDVGEQIGEGNFAIVSSCTNKKTHKKFAVKAIDKAKCKGKEKLLETELEILKRVNHPNIVGLVDDFDTSKYLYLVMELVTGGDLFDVLIERSAFTEKDAAKIILAVVEAVAYLHKEGIVHRDLKPENLLVAKDPSGNHTIKIGDFGLAKIIPPGTMLHTVCGTPSYVAPEILSDAGYGKEVDIWAIGVITYILLSGYPPFSGATQNELFENIKRGVYHFDYPVWDSVSDDAKDFIRRLLSMDPLDRPTAGELLSDSWLTGRTAYDTDIHAMVKEELIRNFNPRRKFRAAVRLMGAAKALLAYNSGQHTNTGELRIPAALHNTLPGTFGGFNNSSSGASPSKVVSPQMRQPTVHGGTFDAGKKRQETIRKDDDGSEEEEEEEDDDGDDNEEEEPVAAARAHVQRQHTLRKDADDSDADDDAGAFVGGRGKVVATPPGKPASPAAKKGKEEDDDEEDEEEEDGEEEEEEEEGEDDEDEEEEEEEGEDGEEEEGEDDEDEDDEEEDDEDEKAK* # PASA_UPDATE: g9227.t1, single gene model update, valid-1, status:[pasa:asmbl_8336,status:12], valid-1 NODE_589_length_20527_cov_43.8992 . gene 6944 8980 . + . ID=g9227;Name=g9227.t1 NODE_589_length_20527_cov_43.8992 . mRNA 6944 8980 . + . ID=g9227.t1;Parent=g9227;Name=g9227.t1 NODE_589_length_20527_cov_43.8992 . five_prime_UTR 6944 6967 . + . ID=g9227.t1.utr5p1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 6944 7132 . + . ID=g9227.t1.exon1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 6968 7132 . + 0 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 7289 7396 . + . ID=g9227.t1.exon2;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 7289 7396 . + 0 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 7500 7589 . + . ID=g9227.t1.exon3;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 7500 7589 . + 0 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 7714 7789 . + . ID=g9227.t1.exon4;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 7714 7789 . + 0 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 7891 8021 . + . ID=g9227.t1.exon5;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 7891 8021 . + 2 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 8202 8305 . + . ID=g9227.t1.exon6;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 8202 8305 . + 0 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . exon 8530 8980 . + . ID=g9227.t1.exon7;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . CDS 8530 8626 . + 1 ID=cds.g9227.t1;Parent=g9227.t1 NODE_589_length_20527_cov_43.8992 . three_prime_UTR 8627 8980 . + . ID=g9227.t1.utr3p1;Parent=g9227.t1 #PROT g9227.t1 g9227 MASLCLRRGAERLSHGRFLAGRHAPIVRLYADNGGDPERVSAAVRHGIVSPDALKRPPSKRSMFLPDNEVFHERIFKQSLDKEGFEPLASQAIEEISRKVDNIMVLDEERAAAARDLRWKQLNDDWVPREKDQRDDVSHVILIRREVPADETPQEREYREFYLDTQRFFHDFWDKHNRRYEHERKLFVAEVCKHAPKGVRSGPAPEHWSSFYRAATDRSHRDFDRFNREWYGMLRRLTWLEIRASLSRLRIRLFSR* # PASA_UPDATE: g6011.t1, single gene model update, valid-1, status:[pasa:asmbl_7347,status:12], valid-1 NODE_4473_length_1567_cov_44.9718 . gene 133 1457 . - . ID=g6011;Name=g6011.t1 NODE_4473_length_1567_cov_44.9718 . mRNA 133 1457 . - . ID=g6011.t1;Parent=g6011;Name=g6011.t1 NODE_4473_length_1567_cov_44.9718 . five_prime_UTR 1398 1457 . - . ID=g6011.t1.utr5p1;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . five_prime_UTR 1099 1103 . - . ID=g6011.t1.utr5p2;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . exon 1398 1457 . - . ID=g6011.t1.exon1;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . exon 941 1103 . - . ID=g6011.t1.exon2;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . CDS 941 1098 . - 0 ID=cds.g6011.t1;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . exon 612 734 . - . ID=g6011.t1.exon3;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . CDS 612 734 . - 1 ID=cds.g6011.t1;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . exon 327 399 . - . ID=g6011.t1.exon4;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . CDS 327 399 . - 1 ID=cds.g6011.t1;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . exon 133 165 . - . ID=g6011.t1.exon5;Parent=g6011.t1 NODE_4473_length_1567_cov_44.9718 . CDS 133 165 . - 0 ID=cds.g6011.t1;Parent=g6011.t1;3_prime_partial=true #PROT g6011.t1 g6011 MTFMGDYPRKVKKGVTLEPLAQFVEIGLNNEDLRDELFVQAIKQTTSNKSKFKDSIARGWQALLVLCSTFPASDPEFYLVLRKYIRDTASIPTRPCSDIAKACEKRITAIKTFGPRKTIPGLYECKVYE # PASA_UPDATE: g13002.t1, single gene model update, valid-1, status:[pasa:asmbl_5546,status:12], valid-1 NODE_3090_length_4353_cov_37.5145 . gene 158 2318 . + . ID=g13002;Name=g13002.t1 NODE_3090_length_4353_cov_37.5145 . mRNA 158 2318 . + . ID=g13002.t1;Parent=g13002;Name=g13002.t1 NODE_3090_length_4353_cov_37.5145 . exon 158 469 . + . ID=g13002.t1.exon1;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . CDS 158 469 . + 0 ID=cds.g13002.t1;Parent=g13002.t1;5_prime_partial=true NODE_3090_length_4353_cov_37.5145 . exon 716 792 . + . ID=g13002.t1.exon2;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . CDS 716 792 . + 0 ID=cds.g13002.t1;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . exon 992 1061 . + . ID=g13002.t1.exon3;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . CDS 992 1061 . + 1 ID=cds.g13002.t1;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . exon 1475 1612 . + . ID=g13002.t1.exon4;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . CDS 1475 1612 . + 0 ID=cds.g13002.t1;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . exon 2044 2318 . + . ID=g13002.t1.exon5;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . CDS 2044 2235 . + 0 ID=cds.g13002.t1;Parent=g13002.t1 NODE_3090_length_4353_cov_37.5145 . three_prime_UTR 2236 2318 . + . ID=g13002.t1.utr3p1;Parent=g13002.t1 #PROT g13002.t1 g13002 TNALPLGTIDLAECTGITRLSPDRSKKPNGFEVATSRRRYALSAASTMERDEWVAALEEAIPEDDHDLTSGAGKTPADRLAAQVELARKSSLLLERQIEELRERVRETESKIEERISVIGSTVLSSFADRFIGRAFSSAFSSLQIVNAVSEQTLVEIGAVRTILPAVSCVDSLCARIIAVAVKEAVPIALATQRQAIAHEAALRAKRKPSLACFTGDETLYDSLRNSQWIDDVAAHIVSDAISKTVAYERISVEVLSSIRAN* # ORIGINAL: g13003.t1 original gene structure, not modified by PASA NODE_3090_length_4353_cov_37.5145 AUGUSTUS gene 2683 4018 . + . ID=g13003;Name=g13003.t1 NODE_3090_length_4353_cov_37.5145 AUGUSTUS mRNA 2683 4018 . + . ID=g13003.t1;Parent=g13003;Name=g13003.t1 NODE_3090_length_4353_cov_37.5145 AUGUSTUS exon 2683 3816 . + . ID=g13003.t1.exon1;Parent=g13003.t1 NODE_3090_length_4353_cov_37.5145 AUGUSTUS CDS 2683 3816 . + 0 ID=cds.g13003.t1;Parent=g13003.t1 NODE_3090_length_4353_cov_37.5145 AUGUSTUS exon 3974 4018 . + . ID=g13003.t1.exon2;Parent=g13003.t1 NODE_3090_length_4353_cov_37.5145 AUGUSTUS CDS 3974 4018 . + 0 ID=cds.g13003.t1;Parent=g13003.t1 #PROT g13003.t1 g13003 MAESFASVEYQKVRVLGKGAFGCAVLYRRKEDNSLVVLKEVELRSMDPKERLKALNEVVILSSLNHPNIVQHYDTFEDNGTLLIEMEYADGGSLHEKIFGSAAKPLSEKEVLMYFYQIVSSLHHVHGCNVLHRDLKALNIFLTRDGLVKLGDFGIAKALGDNGKAETQVGTPYYMSPEILHGEPYDQKSDIWSLGCILYELMARRRPFEGSNYFSLAKKIMDGRYEPVEGLFTPELRALLSSMLQMEPAKRPSTTEILALPLITKVGEEMEARLGNMTQRRRARTMSASLNGSAGTGDIPVITHKNSDVYFWGKGRLTPLPVEAFGKTQTAISVAIGAYHFAAVTAECEVFTWGELSRETNKGQLGHGDRNSQRTPKRCMNADVNMVFSCHC* # PASA_UPDATE: g14128.t1, single gene model update, valid-1, status:[pasa:asmbl_231,status:12],[pasa:asmbl_232,status:12], valid-1 NODE_1061_length_14338_cov_44.6342 . gene 6331 10559 . - . ID=g14128;Name=g14128.t1 NODE_1061_length_14338_cov_44.6342 . mRNA 6331 10559 . - . ID=g14128.t1;Parent=g14128;Name=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 9600 10559 . - . ID=g14128.t1.exon1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 9600 10559 . - 0 ID=cds.g14128.t1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 7885 9231 . - . ID=g14128.t1.exon2;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 7885 9231 . - 0 ID=cds.g14128.t1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 7530 7598 . - . ID=g14128.t1.exon3;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 7530 7598 . - 0 ID=cds.g14128.t1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 7162 7332 . - . ID=g14128.t1.exon4;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 7162 7332 . - 0 ID=cds.g14128.t1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 6748 6937 . - . ID=g14128.t1.exon5;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 6748 6937 . - 0 ID=cds.g14128.t1;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . exon 6331 6593 . - . ID=g14128.t1.exon6;Parent=g14128.t1 NODE_1061_length_14338_cov_44.6342 . CDS 6331 6593 . - 2 ID=cds.g14128.t1;Parent=g14128.t1 #PROT g14128.t1 g14128 MHSSATNITSGDSGTLIYTVSDVLVVFNNVSVDGVSLESIYSQGFVVSPPSSLRLDPNTTSAVTNALSGGLFTSASWLPEISLILYDSLGTPVPDRRLEERLIVSIRLYFANGTMVGERMDGAVRVGGYKMTGNTRIGFEYGKSAFPANTLQLYVVPGTYVLRIISETASYTSTKFNVSLPVTVRRCPAGRSVDSFTLSCVQCAAYTYSITEEAATCSAVPTGYGTVDGVTVVPCNLLSDPSVCVGLVSGGGADVRVLVPAILIPAFSIICVGAALYAYARRRALAELQKARNWVIDVSEIEMGDLIGEGTFGVVYRGIWRGSVVAIKMLRSNARSSQMSLPKKHRPSNENVHAGAAIGSAVSGADGTKGSSVSRVPSSLSPLLMLSEGDPLPPGVTKSMVTAAHDEALRSPSAVAFGGVGAVGAPMPSPEHLAAKNRLRGGPCLSRRESDAGGSSERLSEKDQKSERSSDHDIPAHVMQQLMMLSEGDPLPPGISASLLAQIQQNADVGCRYESNATLFAGNRQQQSRRGSLAVAEAESKAAAPFDALGVVTGSMPHDDHMRTCLSSYGVDQASSEAVEGNRVSPDGENTSGTISHNNSVPRLPGGPAPHPPATYHSAGGELAGGTVQFDRPSTARMSASLPANASRAGGVSAARHTYREMVARTAVDIPLNNDAIRTHADHMRSPRLRKWLSSAVAWLGVNVGRLVSPAGSSDVRASEVGVGSSMTSGGPPTLTISDIVSDDTPSHSRGLLPKRKSVDERALAEFIKEIEIMCALRHPNIVIMMGACVKKPDVCIVAEYMANGSVYDVYNMPGFQMDWRVRIAFALDAAHGMEFLHLATPPILHLDLKSLNLLVDDRHRVKVSDFGLAAMKQQSTDAKVATRKGSILWMAPEICRLEPGCYSEKADVYSFGIILWELIYSQLPYAHHVSMGVPALMKAIGTDGLRPPMRYDVPSAFQSLVRDCWAPDAQRRPSFSVITRSLASFAPATWREPKVFSK* # ORIGINAL: g14129.t1 original gene structure, not modified by PASA NODE_1061_length_14338_cov_44.6342 AUGUSTUS gene 12194 13603 . - . ID=g14129;Name=g14129.t1 NODE_1061_length_14338_cov_44.6342 AUGUSTUS mRNA 12194 13603 . - . ID=g14129.t1;Parent=g14129;Name=g14129.t1 NODE_1061_length_14338_cov_44.6342 AUGUSTUS exon 12580 13603 . - . ID=g14129.t1.exon1;Parent=g14129.t1 NODE_1061_length_14338_cov_44.6342 AUGUSTUS CDS 12580 13603 . - 0 ID=cds.g14129.t1;Parent=g14129.t1 NODE_1061_length_14338_cov_44.6342 AUGUSTUS exon 12194 12402 . - . ID=g14129.t1.exon2;Parent=g14129.t1 NODE_1061_length_14338_cov_44.6342 AUGUSTUS CDS 12194 12402 . - 2 ID=cds.g14129.t1;Parent=g14129.t1 #PROT g14129.t1 g14129 MSTLDPVDDPCEHDAVASIISAKRYHHAGVNVPHGLEGVWDDDSTMSSSTLKHARTTPPTAPAWAHLLGGGVGGTLGAVVTCPLEVIKTRLQSGRFSGVASSVKGKDGHTVHHAAGHLSSKATETTRARRLWAYVRRSQIPKDRSIIGMLAQIYRREGPGGLFRGLLPNLVGVAPGRAIYFASYSHAKDYFTRQNGNAESTAVHLASGVVASVGTSTLTNPIWLVKTRLQLQTTSLSGPSVEAHRGVAGRMHAGFQRTVHCVRQIYANEGVSGFYKGLSASYAGVGETCIQFVLYERFKDSMRKHRKIEAGDRQQAEHVFVDYLLAGGTAKLFATLATYPHEVIRTRLREVGRDGQSKYRGFFKTLAAVARNEGVAGLYGGLAAHLLRVVPNTGIMFLSYEFIVHHMAAR* # PASA_UPDATE: g14126.t1, single gene model update, valid-1, status:[pasa:asmbl_233,status:12], valid-1 NODE_1061_length_14338_cov_44.6342 . gene 95 681 . + . ID=g14126;Name=g14126.t1 NODE_1061_length_14338_cov_44.6342 . mRNA 95 681 . + . ID=g14126.t1;Parent=g14126;Name=g14126.t1 NODE_1061_length_14338_cov_44.6342 . five_prime_UTR 95 96 . + . ID=g14126.t1.utr5p1;Parent=g14126.t1 NODE_1061_length_14338_cov_44.6342 . exon 95 252 . + . ID=g14126.t1.exon1;Parent=g14126.t1 NODE_1061_length_14338_cov_44.6342 . CDS 97 252 . + 0 ID=cds.g14126.t1;Parent=g14126.t1;5_prime_partial=true NODE_1061_length_14338_cov_44.6342 . exon 475 681 . + . ID=g14126.t1.exon2;Parent=g14126.t1 NODE_1061_length_14338_cov_44.6342 . CDS 475 573 . + 0 ID=cds.g14126.t1;Parent=g14126.t1 NODE_1061_length_14338_cov_44.6342 . three_prime_UTR 574 681 . + . ID=g14126.t1.utr3p1;Parent=g14126.t1 #PROT g14126.t1 g14126 FPGGTQMVFRSIDDAALCPQQKGYVRGVMIDCAERIERLADGSGIRVTYILQTDTRGLLPKGVSNYANIDVMFKEFQNLHLLTK* # PASA_UPDATE: g14127.t1, single gene model update, valid-1, status:[pasa:asmbl_234,status:12], valid-1 NODE_1061_length_14338_cov_44.6342 . gene 1349 5850 . + . ID=g14127;Name=g14127.t1 NODE_1061_length_14338_cov_44.6342 . mRNA 1349 5850 . + . ID=g14127.t1;Parent=g14127;Name=g14127.t1 NODE_1061_length_14338_cov_44.6342 . five_prime_UTR 1349 1664 . + . ID=g14127.t1.utr5p1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 1349 1829 . + . ID=g14127.t1.exon1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 1665 1829 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 2261 2371 . + . ID=g14127.t1.exon2;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 2261 2371 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 2614 3021 . + . ID=g14127.t1.exon3;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 2614 3021 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 3519 3626 . + . ID=g14127.t1.exon4;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 3519 3626 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 3776 4009 . + . ID=g14127.t1.exon5;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 3776 4009 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 4252 4350 . + . ID=g14127.t1.exon6;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 4252 4350 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 4556 4626 . + . ID=g14127.t1.exon7;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 4556 4626 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 4719 4836 . + . ID=g14127.t1.exon8;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 4719 4836 . + 1 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 5037 5204 . + . ID=g14127.t1.exon9;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 5037 5204 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 5497 5645 . + . ID=g14127.t1.exon10;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 5497 5645 . + 0 ID=cds.g14127.t1;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . exon 5844 5850 . + . ID=g14127.t1.exon11;Parent=g14127.t1 NODE_1061_length_14338_cov_44.6342 . CDS 5844 5850 . + 1 ID=cds.g14127.t1;Parent=g14127.t1 #PROT g14127.t1 g14127 MAGWFQDGFKHWMVNEGPKALFMILWMVGNITVFAHTFVYYRDDHKFVCVRSVVHYGLPTARASAAIISYNSALILIPVCRNLISFVRGHVKSSVVRLLDKNLRFHKICAWTILIFAISHTGAHLENFYNLANNPTVGLCGVPAGTTMEDIMWTTVAGATGQILLIVMFLMYSSSMEIIRHSFFEVFWFTHHLFVVFFILLCVHGAGGLIKAGTNCTDYNDMTTCTYKGGGPKYWMWVVGPLGLYVLERSVRFWRSQQETIVSKVIQHPSKVIEIQIKKRGFHAEPGQYIFVHCPKISPLEWHPFTLTSAPEEDFCSVHIRVVGDWTESLAKALGCNFERRKDGEAATDEVKLSGVLPHVAIDGPFGTPSEDVFQFEVAVCVGAGIGVTPFASVLKSIWYRLQNPTATLKLRKVYFVWICREKEAFEWFSDLLDAMEQHLIETGNAEFLDARIYLTESLKADDVKNIMMHNDAATDTITGLRAKTLFGRPHWEKIFGDVADAHHGTDIGVFFCGPKILSTQLHINCNRFTNINTNTKFRYFKENF* # ORIGINAL: g844.t1 original gene structure, not modified by PASA NODE_1725_length_9509_cov_40.1105 AUGUSTUS gene 6083 9509 . + . ID=g844;Name=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS mRNA 6083 9509 . + . ID=g844.t1;Parent=g844;Name=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 6083 6218 . + . ID=g844.t1.exon1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 6083 6218 . + 0 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 6376 6676 . + . ID=g844.t1.exon2;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 6376 6676 . + 2 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 6955 7271 . + . ID=g844.t1.exon3;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 6955 7271 . + 1 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 7502 7650 . + . ID=g844.t1.exon4;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 7502 7650 . + 2 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 7889 7960 . + . ID=g844.t1.exon5;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 7889 7960 . + 0 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 8448 8556 . + . ID=g844.t1.exon6;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 8448 8556 . + 0 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 8687 8831 . + . ID=g844.t1.exon7;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 8687 8831 . + 2 ID=cds.g844.t1;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 9203 9509 . + . ID=g844.t1.exon8;Parent=g844.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 9203 9509 . + 1 ID=cds.g844.t1;Parent=g844.t1 #PROT g844.t1 g844 MPSCIHSGCGSGRIAASSSANADGFLIAGSKKHYARDLVVEPIHTDVKLRLDIPARSAEAEITIRFRSNAHPQQTQPSSVVLNGISFQDVSVDGAGGVAVDFRYDGREIRLQWATPFSSKEERCVRLRYRIVEPIAGLNFSNPDDKYPGRATFVATDHETERARYWLACIDYPTVRTSFAFHLTAPTGLRQVANGLQIGEPAVDAANNLTTTHWRLDYPCPSYLCCFAVGEFTFIEDEPVNGMPIAYIGTKNMSVEDLRYSFANTRDMLTWMPNKLNVPFPFPKYYQIVLPKIGGAMENISLVTWDEHWLLDKRYGLERRQLFDQVNVHEMAHSYFGDAVVIRHFEHAWLKESWATYMEACWIEDRLSPEHFQLELVDQADCYFSETENYVRPIVTREYNSSWDLFDMHLYPGGSMRLHMLRRWLGDGAFWAAVSSYIKRFEKRTVETDDFRKELETYSGLNLTGFFDQWIYGRGHPKLSGSFSLETDASGSSIASLSFEQTQGAKDVSGRR # ORIGINAL: g842.t1 original gene structure, not modified by PASA NODE_1725_length_9509_cov_40.1105 AUGUSTUS gene 732 2056 . + . ID=g842;Name=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS mRNA 732 2056 . + . ID=g842.t1;Parent=g842;Name=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 732 900 . + . ID=g842.t1.exon1;Parent=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 732 900 . + 0 ID=cds.g842.t1;Parent=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 1035 1318 . + . ID=g842.t1.exon2;Parent=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 1035 1318 . + 2 ID=cds.g842.t1;Parent=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 1745 2056 . + . ID=g842.t1.exon3;Parent=g842.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 1745 2056 . + 0 ID=cds.g842.t1;Parent=g842.t1 #PROT g842.t1 g842 MCYDDENAPDSPDGAVFRRVLQSVAESLIASEPLITRLDVIVGDGDCGETLKRGAQAVLSAMKDLNGISPVMPSIEGEGRVSMDSLGLPASFRIPFSGNHGQTLLAVSEVVQRAMGGSSGALYSIALTAAGASFAQDDATEGVFRWAKALQLGVSAMQRYGGARTGDRTMLDALIPAARTLSDLSRDDAHPTNVQHVAEIVAAASREGADATAHMQAHAGRSSYVASDVVAGTPDPGAVAVAVWMEAVRDSILQ* # ORIGINAL: g843.t1 original gene structure, not modified by PASA NODE_1725_length_9509_cov_40.1105 AUGUSTUS gene 2386 5318 . - . ID=g843;Name=g843.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS mRNA 2386 5318 . - . ID=g843.t1;Parent=g843;Name=g843.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 2678 5318 . - . ID=g843.t1.exon1;Parent=g843.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 2678 5318 . - 0 ID=cds.g843.t1;Parent=g843.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS exon 2386 2558 . - . ID=g843.t1.exon2;Parent=g843.t1 NODE_1725_length_9509_cov_40.1105 AUGUSTUS CDS 2386 2558 . - 2 ID=cds.g843.t1;Parent=g843.t1 #PROT g843.t1 g843 MSLNPETFTDKTNEVLSAAQELAREHQHVALSPVHVAVALMTDEDGLARQVCAKSGVDPQVVDRALRRLLVRLPTQDPPPDEITPNHQLIKMLKAAQALQKKNADSHLAVDHLLMALMDEKQVADALAEAGLTKNKLDEAIKAVRKGRKVESKSAEETYDALTKYGHDLVKDAQDGKLDPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPNNLNCKVISLDMGALVAGAKYRGEFEERLKAVLKEVQESKEGIILFIDEIHLVLGAGKTDGAMDAANLLKPMLARGELRCIGATTLTEYRKHVEKDPAFERRFQQVLVKEPTVEDTISILRGLKERYETHHGVRITDASLVVAAQLADRYITQRFLPDKAIDLVDEACASTRVQLDSQPEAIDNLDRRKMQLEVEATALEKEDDKASKARLKTVREELSSIQEQLKPLRMRYDREKGRVEELRTVRRRLEEVRQKIVEAERRYDLALVADLRYGALPELEKRLEHLTNEEKTRTQTPGEEANQLLVETVGPDQIAEVVARWTGIPVSKLSQTERERLLHLATHLHARVVGQDEAVDAVADAVLRSRAGLGRENQPTGSFLFLGPTGVGKTELAKALASELFDDENQIVRMDMSEYMEQHAVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGQGRTVSFINTVIIMTSNLGSEHLHSVGADGRIPEAARDKVMAVVKKNFRPEFLNRLDDIVLFQPLNANMLHKIVDIQAACIAKRLVDRDIHLSLSRGAKDYVLEQAFDPSYGARPLRRYLERYIVTHLSKMLIAGTLSEHCNVQVDAATDGLSFKVTPIAPEQRGLTRQTNSGMRRKVRRIVRTSKHPRDDHSDKEDSISSGGAGVDVAADADEPPAKRPKKKQSGD* # ORIGINAL: g14007.t1 original gene structure, not modified by PASA NODE_4137_length_2136_cov_34.015 AUGUSTUS gene 994 1860 . + . ID=g14007;Name=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS mRNA 994 1860 . + . ID=g14007.t1;Parent=g14007;Name=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS exon 994 1155 . + . ID=g14007.t1.exon1;Parent=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS CDS 994 1155 . + 0 ID=cds.g14007.t1;Parent=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS exon 1458 1633 . + . ID=g14007.t1.exon2;Parent=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS CDS 1458 1633 . + 0 ID=cds.g14007.t1;Parent=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS exon 1752 1860 . + . ID=g14007.t1.exon3;Parent=g14007.t1 NODE_4137_length_2136_cov_34.015 AUGUSTUS CDS 1752 1860 . + 1 ID=cds.g14007.t1;Parent=g14007.t1 #PROT g14007.t1 g14007 MMSANSSLTSLAVEDAPIELSMKVRRTDNNTQFVLRLTNLTIETANAGKAKRLQLALRDLIGIAVEQHLIRFHLLLQRSPIVDDGIGYLKTHTFAFDVTDVSVQQFVTEAKMRLHSEIRSGMVERWRDAAISVIVALMIAYTRYYHTP* # ORIGINAL: g278.t1 original gene structure, not modified by PASA NODE_3878_length_2578_cov_51.2601 AUGUSTUS gene 127 1018 . + . ID=g278;Name=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS mRNA 127 1018 . + . ID=g278.t1;Parent=g278;Name=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 127 387 . + . ID=g278.t1.exon1;Parent=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 127 387 . + 0 ID=cds.g278.t1;Parent=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 545 659 . + . ID=g278.t1.exon2;Parent=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 545 659 . + 0 ID=cds.g278.t1;Parent=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 945 1018 . + . ID=g278.t1.exon3;Parent=g278.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 945 1018 . + 2 ID=cds.g278.t1;Parent=g278.t1 #PROT g278.t1 g278 VALGYNQLPDSAIEDLPVPLLQTNGFIFIWVINNRFSKALELMDKWGYTFVDSVDWIKQTVNRRMAKSHGFYLQHAKETCFIGKKGQDPPGCRNGVASDVIFSVRRGQSQKPDEIYEMVEQLVPNGRYLEIFGRRNNLRNYWVTVGNEL* # ORIGINAL: g279.t1 original gene structure, not modified by PASA NODE_3878_length_2578_cov_51.2601 AUGUSTUS gene 1636 2440 . + . ID=g279;Name=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS mRNA 1636 2440 . + . ID=g279.t1;Parent=g279;Name=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 1636 1869 . + . ID=g279.t1.exon1;Parent=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 1636 1869 . + 0 ID=cds.g279.t1;Parent=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 2026 2101 . + . ID=g279.t1.exon2;Parent=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 2026 2101 . + 0 ID=cds.g279.t1;Parent=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS exon 2246 2440 . + . ID=g279.t1.exon3;Parent=g279.t1 NODE_3878_length_2578_cov_51.2601 AUGUSTUS CDS 2246 2440 . + 2 ID=cds.g279.t1;Parent=g279.t1 #PROT g279.t1 g279 MPSIDPSELYSTGIDVWLEDAAEGWRTASVTAKGSDSTDYVLVLSCEDGTEVKVTKGSPLPPICNPPTLDGVDDMTTLSYLHEPAVLQCVHTRYRRSTIYTYSGIVLVAVNPFQSFPELYSADMIFTYRGQSMGQLEPHLFAVAEEAFARMVRKKESQSVIVSGESGA # PASA_UPDATE: g637.t1, single gene model update, valid-1, status:[pasa:asmbl_1174,status:3], valid-1 NODE_1311_length_12221_cov_40.0058 . gene 7338 8731 . - . ID=g637;Name=g637.t1 NODE_1311_length_12221_cov_40.0058 . mRNA 7338 8731 . - . ID=g637.t1;Parent=g637;Name=g637.t1 NODE_1311_length_12221_cov_40.0058 . five_prime_UTR 8520 8731 . - . ID=g637.t1.utr5p1;Parent=g637.t1 NODE_1311_length_12221_cov_40.0058 . exon 7942 8731 . - . ID=g637.t1.exon1;Parent=g637.t1 NODE_1311_length_12221_cov_40.0058 . CDS 7942 8519 . - 0 ID=cds.g637.t1;Parent=g637.t1 NODE_1311_length_12221_cov_40.0058 . exon 7338 7637 . - . ID=g637.t1.exon2;Parent=g637.t1 NODE_1311_length_12221_cov_40.0058 . CDS 7550 7637 . - 1 ID=cds.g637.t1;Parent=g637.t1 NODE_1311_length_12221_cov_40.0058 . three_prime_UTR 7338 7549 . - . ID=g637.t1.utr3p1;Parent=g637.t1 #PROT g637.t1 g637 MFRVGFSAARTTAASLSTICTRAAAAHTLTIQHHHVIGRSVIATALFHSTARASEESLRPRKDVAAPILPERRHLVHDDMVRKVICVVMKNGKKSTAEGIVHDALEKIKVKELSKAPIADPVAILRRALDNIKPTIETRPVRMGGTVFQVPRPVLPNRQQSLSLRWLVKAARGRKKGKNMAEALALEVLDAIKHEGGAVKKRMEVHKQAESNRAYAHYRWS* # ORIGINAL: g636.t1 original gene structure, not modified by PASA NODE_1311_length_12221_cov_40.0058 AUGUSTUS gene 4161 6851 . + . ID=g636;Name=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS mRNA 4161 6851 . + . ID=g636.t1;Parent=g636;Name=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 4161 4772 . + . ID=g636.t1.exon1;Parent=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 4161 4772 . + 0 ID=cds.g636.t1;Parent=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 5152 5537 . + . ID=g636.t1.exon2;Parent=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 5152 5537 . + 0 ID=cds.g636.t1;Parent=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 5786 6851 . + . ID=g636.t1.exon3;Parent=g636.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 5786 6851 . + 1 ID=cds.g636.t1;Parent=g636.t1 #PROT g636.t1 g636 MSRLMAGAIRAYSCSTFRLTAVATQPPRFLLSAFARSAHSRPVFSITGTNPGHSAMHRWTARLSGVANVRNVNTGAMDDDRKAKHNSAANSESLDDSSENIAVSDSGAVGIEPTDGSAIVAGKGRPRRRGRRNNEPIDHTADGTIPPVSLSKVATRESRLKDPNYWRQTFVIGAEEPYEEAGVTEEEADLAEAAERKRYAIRQRGRQFIDTKRILLRAGNGGDGCVSVRREKYVDAGGPDGGNGGNGGNVIFRVDRAVTSLNHLNTLVYAGRGGNGSGTKRHGANGEDKVVPVPIGTQITSSEGEVLADLVQYGQEYLAVHGGRGGRGNAVFRSPINKTPMHATPGETGDERRVRLELKSVADIGLVGMPNAGKSSLLRAISRASPRVADYPFTTLNPYLGVVDYADYTRVTVADMPGLVRGAHANVGLGHEFLRHIERSTVLLYVVDASAGESSIVNREREAAAAAAAATEGEETKVDEEGSAGAKAVSALDHVTSLGARTGHVADDTMQGQKGGVFIDAETLTARTPAELRGRRRRPEKSIGVEPWDALSCLRDELALYSAALTDKPSIVVATKVDVNEAARQRVEKLRAMEGSRSVVVGVSSITGDNIESLLTEMRALVESNDARRIVTTKTADDFANTLFNGALFGNVPAKRTEVAKTQLKSSAEERLEWKREMRRRRPRPPE* # PASA_UPDATE: g638.t1, single gene model update, valid-1, status:[pasa:asmbl_1175,status:3], valid-1 NODE_1311_length_12221_cov_40.0058 . gene 8693 9801 . - . ID=g638;Name=g638.t1 NODE_1311_length_12221_cov_40.0058 . mRNA 8693 9801 . - . ID=g638.t1;Parent=g638;Name=g638.t1 NODE_1311_length_12221_cov_40.0058 . five_prime_UTR 9753 9801 . - . ID=g638.t1.utr5p1;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . exon 9602 9801 . - . ID=g638.t1.exon1;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . CDS 9602 9752 . - 0 ID=cds.g638.t1;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . exon 9333 9423 . - . ID=g638.t1.exon2;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . CDS 9333 9423 . - 2 ID=cds.g638.t1;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . exon 8693 9076 . - . ID=g638.t1.exon3;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . CDS 8869 9076 . - 1 ID=cds.g638.t1;Parent=g638.t1 NODE_1311_length_12221_cov_40.0058 . three_prime_UTR 8693 8868 . - . ID=g638.t1.utr3p1;Parent=g638.t1 #PROT g638.t1 g638 MAGAWGEQFTAGDQTLDLRMSLYESWFKECSLCGADVTEDVNCAGCRHNGDGYGTSVFTCDKCGWSTSFQYDEAGDTYFYETRSWKKRLPSKSVSELGEWMAKNRLGHLVEAFRKKGIDGTKLGKMSEKDIAKLGATEREARSLYRRSQ* # ORIGINAL: g639.t1 original gene structure, not modified by PASA NODE_1311_length_12221_cov_40.0058 AUGUSTUS gene 10277 11832 . + . ID=g639;Name=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS mRNA 10277 11832 . + . ID=g639.t1;Parent=g639;Name=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 10277 10411 . + . ID=g639.t1.exon1;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 10277 10411 . + 0 ID=cds.g639.t1;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 10614 10777 . + . ID=g639.t1.exon2;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 10614 10777 . + 0 ID=cds.g639.t1;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 11094 11161 . + . ID=g639.t1.exon3;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 11094 11161 . + 1 ID=cds.g639.t1;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 11443 11524 . + . ID=g639.t1.exon4;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 11443 11524 . + 2 ID=cds.g639.t1;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 11718 11832 . + . ID=g639.t1.exon5;Parent=g639.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 11718 11832 . + 1 ID=cds.g639.t1;Parent=g639.t1 #PROT g639.t1 g639 MACQMPTCDCQSFLDDGRDDLNDQDVLDDAAVCVYCRHERNSHRKRWTHYRLDGTVISGDSAWKDVIASARDSLEQTKQRMAAVEYTADDQAWSRLIDKLAEQTAVVGSLENLCRGKGKKITYQQITPMVRAPTDEERRMESVARMMLPNLGLEYFLEMQREIIIDVMQDRDVIVVMATGSGKSLCFQ # ORIGINAL: g635.t1 original gene structure, not modified by PASA NODE_1311_length_12221_cov_40.0058 AUGUSTUS gene 136 3551 . - . ID=g635;Name=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS mRNA 136 3551 . - . ID=g635.t1;Parent=g635;Name=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 3435 3551 . - . ID=g635.t1.exon1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 3435 3551 . - 0 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 2938 3176 . - . ID=g635.t1.exon2;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 2938 3176 . - 0 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 2122 2761 . - . ID=g635.t1.exon3;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 2122 2761 . - 1 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 1648 1882 . - . ID=g635.t1.exon4;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 1648 1882 . - 0 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 940 1359 . - . ID=g635.t1.exon5;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 940 1359 . - 2 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 511 572 . - . ID=g635.t1.exon6;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 511 572 . - 2 ID=cds.g635.t1;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS exon 136 256 . - . ID=g635.t1.exon7;Parent=g635.t1 NODE_1311_length_12221_cov_40.0058 AUGUSTUS CDS 136 256 . - 0 ID=cds.g635.t1;Parent=g635.t1 #PROT g635.t1 g635 MDIPHELLQTPLPFVAIAGLNPSKEPAHKAIWEFIAEKDANHPAVISAKLISPNHAFPKRKEKRSNDSYVPDRVIKPTWLHKHRGVIPAVLAVFVELEWEDAQWGAREIEIASKLGTLRSSLYGRGTRVALILIQRTSQGPLSTSPDVAPPLSALAEERCVSLRKACGFTDPKAPLLTVCVAETNEMKTGLVRVERAVADVAQVYYREEARRFKKHRDVLNKLSQQLLFARYYFKVAFFAEIRGDAKAALKYYHSAYSYLKDVRDREARSRDIKQVAGWIDYKICRFLFASSSTQLEAIEQFRRHCAFYRRLIGPDEIEFQHYAWLSRQYRQFADIFDSAIRRGTASGDQTHHPGFYYRTAAEYAATRRDKVLSMGIVPTVLSARRSGDATALSALAVPSATQQGGTDAASSKWRTEYSGIARPRASHPLDDATNGGTSYLDDPKVALEAERNVDHSALVVDLLTNARAHFKKHNSGRMTLLIAVKIAEEYASSGDCGRALQLFDRIARDYRKEKWWAVLAAILSNALTCAFTEGNVRLYVAAALEYIAPFNETPKDNLIRVQHNLMRVLMGNAPLPEPEAVPTRDSAVKNWSDAMTGPPLEISLGDLVPF # ORIGINAL: g11789.t1 original gene structure, not modified by PASA NODE_652_length_19562_cov_43.3583 AUGUSTUS gene 3804 5027 . - . ID=g11789;Name=g11789.t1 NODE_652_length_19562_cov_43.3583 AUGUSTUS mRNA 3804 5027 . - . ID=g11789.t1;Parent=g11789;Name=g11789.t1 NODE_652_length_19562_cov_43.3583 AUGUSTUS exon 3804 5027 . - . ID=g11789.t1.exon1;Parent=g11789.t1 NODE_652_length_19562_cov_43.3583 AUGUSTUS CDS 3804 5027 . - 0 ID=cds.g11789.t1;Parent=g11789.t1 #PROT g11789.t1 g11789 MFTPRGGVLRGVSRRCASPRITTLTLVAVGLFAYAMYVGISQPDSENANIATNEYEEEADDDLRPNAMVEEPIGDLSDVDVGSYNEDSDKPIAAADGDDIGRGEGIRELSQDKIELDALRKSLSKLNLADKDDSANARVRRGLIEVLERPLYKEPAKPWLIAEKMAEEYTFLSLVVDIGKYSRRVLILVGCGSKNPANPSELLSPAWFEKHYPSFNSHPFDIHVIQPDPDAADRMDAFVLSRTAKGVRWPHTLTVHRLGVLEGARQQEGVRMFTIVDSESIGDEEESRHDPLSDLHAMEHSRQVSANGINLDAWIKTVVSEGDLCILAMDIGAAEHNLFGEISETTTEDRGIDRVTELFVESHYNRWLKSAPFRASVPFTFAQSATLIDLLRNEGVPTHQVIPGSGH* # PASA_UPDATE: g11787.t1, single gene model update, valid-1, status:[pasa:asmbl_8706,status:12], valid-1 NODE_652_length_19562_cov_43.3583 . gene 99 1111 . - . ID=g11787;Name=g11787.t1 NODE_652_length_19562_cov_43.3583 . mRNA 99 1111 . - . ID=g11787.t1;Parent=g11787;Name=g11787.t1 NODE_652_length_19562_cov_43.3583 . five_prime_UTR 1050 1111 . - . ID=g11787.t1.utr5p1;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . exon 1009 1111 . - . ID=g11787.t1.exon1;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . CDS 1009 1049 . - 0 ID=cds.g11787.t1;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . exon 480 561 . - . ID=g11787.t1.exon2;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . CDS 480 561 . - 1 ID=cds.g11787.t1;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . exon 99 207 . - . ID=g11787.t1.exon3;Parent=g11787.t1 NODE_652_length_19562_cov_43.3583 . CDS 99 207 . - 0 ID=cds.g11787.t1;Parent=g11787.t1;3_prime_partial=true #PROT g11787.t1 g11787 MLSIAARSAKTVCRRPQLFQPTRFASGSTTASPYSKPFFEKNALLNRPMSPHLTIYKLQLTSMLSITHRGTGIFLSL # PASA_UPDATE: g11791.t1, single gene model update, valid-1, status:[pasa:asmbl_8697,status:3], valid-1 NODE_652_length_19562_cov_43.3583 . gene 9560 13486 . + . ID=g11791;Name=g11791.t1 NODE_652_length_19562_cov_43.3583 . mRNA 9560 13486 . + . ID=g11791.t1;Parent=g11791;Name=g11791.t1 NODE_652_length_19562_cov_43.3583 . five_prime_UTR 9560 9680 . + . ID=g11791.t1.utr5p1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . exon 9560 10072 . + . ID=g11791.t1.exon1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . CDS 9681 10072 . + 0 ID=cds.g11791.t1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . exon 10256 10710 . + . ID=g11791.t1.exon2;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . CDS 10256 10710 . + 1 ID=cds.g11791.t1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . exon 11257 11939 . + . ID=g11791.t1.exon3;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . CDS 11257 11939 . + 2 ID=cds.g11791.t1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . exon 12175 12319 . + . ID=g11791.t1.exon4;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . CDS 12175 12319 . + 0 ID=cds.g11791.t1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . exon 12578 13486 . + . ID=g11791.t1.exon5;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . CDS 12578 13191 . + 2 ID=cds.g11791.t1;Parent=g11791.t1 NODE_652_length_19562_cov_43.3583 . three_prime_UTR 13192 13486 . + . ID=g11791.t1.utr3p1;Parent=g11791.t1 #PROT g11791.t1 g11791 MRVIELSHLHPWTGASRMRPDSKANPLYSVAALSVCILLVAAVCIEMAYAQGVCTDPSSACAICPAIPSSPGDRRPNKNALIVAQFNAEFLFRFRPECTANTGASGCLGMSVWTTAAQVNAHLDAVAEIIRDLDADVLNLVEVEDCYILEQLNSRLSGMGYRYYVSRNTDTATNQHVALLTRVDPQVSLSFYSGTTAIPVPGSQCNASSSGTTSVSKNYYTEIAPTVGNGGPSIPIRLIGTHLKAFPFDPPSCQQREGQAINLRKSLSASLADGVSKAVIMFGDLNDYDDNVTDSDSNVPVSRALSILRGTTLNTDASPVLRNVASLIPKQRRFSSSYYDRGVPKVGLIDHILVSDELWSRIVSVDAYQKHDAFNGVTSDHWPIVVIFDFGERKELPVRGLTFSDSPVLACGSSRGPYLFGVGCAPDASAAVTPTTGVPLASFANTTVTLYVQSLSGAGTGSPTYSWAFGDGTVVNTTSNFVAHTYAAPGAYQVSLTASNSASSSTVVRMVYAAVPQPSVLPTITTVAKSASSAASTSGPSSRPLSTTSAVISTPSPTSSGSTTAVVSLSSSNGSGGTSSTDLGAIIGGIAGGVAGVALATVCYFLWRRHRRKTGASVHSSAGRAHAFRPPTHQQHQKPRHNHHNHNRHNADGKDGRLTAMQRAMRSNMQRVIRKMAKVSPAQDPAPSAAVREASDSDHNRNPPPATTATHTIPPPVSAAREHDAPVVSPRDPLANLRDDRWAEIPRTTNESTRNAAILHNN* # PASA_UPDATE: g11790.t1, single gene model update, valid-1, status:[pasa:asmbl_8707,status:12], valid-1 NODE_652_length_19562_cov_43.3583 . gene 7187 9128 . + . ID=g11790;Name=g11790.t1 NODE_652_length_19562_cov_43.3583 . mRNA 7187 9128 . + . ID=g11790.t1;Parent=g11790;Name=g11790.t1 NODE_652_length_19562_cov_43.3583 . exon 7187 9128 . + . ID=g11790.t1.exon1;Parent=g11790.t1 NODE_652_length_19562_cov_43.3583 . CDS 7187 8791 . + 0 ID=cds.g11790.t1;Parent=g11790.t1 NODE_652_length_19562_cov_43.3583 . three_prime_UTR 8792 9128 . + . ID=g11790.t1.utr3p1;Parent=g11790.t1 #PROT g11790.t1 g11790 MPARVHPATQKEKGTKRLDILLATPVGRKSVTAACTVVLPPEDLAEKARFRRRFRIGYAIAVSVFITLAYCLFVRPVVLPHFYSGSVVLLVAFRWFYYYSKRWHHFCIDFCYLGNTLLILYIYAFPREPRLFSVIFALANGPLATAVFIFKNSLVLTSLDKCTSVYIHVLPPIVVYSLRWHAPNSHYDVCVGSDCASSMVWTLAAPMVLFIGHSFVYFIYVEAIPHPKLRADPRYLYSFNYLSASWPKSPIAYLRRLAAAPRYKQLLFYYVSGWTLALCTMAPTILYYRYENFNTIYLALVGFGCAFNGGEYYASVLWRSRRLDSAEDISLATGEGTDESNLETVREDSADCEPCVGKLTEQIDGDHKVDIDVCAEQTEEVRRGEGHADKHSTNVSSSSAWPVQMDPSDGGHVSGSGQDAAREEDDSDSDGSRIGHVDVHANGTLDHVPAEEAVSIVASPGVRPRQLPKIENAPPLPVVASASLTGTHGHGAAPLVGPSHGALGSGDVAGADESASQNASAAHLKLSSVQQGHS* # PASA_UPDATE: g11788.t1, single gene model update, valid-1, status:[pasa:asmbl_8696,status:12], valid-1 NODE_652_length_19562_cov_43.3583 . gene 1399 3353 . + . ID=g11788;Name=g11788.t1 NODE_652_length_19562_cov_43.3583 . mRNA 1399 3353 . + . ID=g11788.t1;Parent=g11788;Name=g11788.t1 NODE_652_length_19562_cov_43.3583 . five_prime_UTR 1399 1465 . + . ID=g11788.t1.utr5p1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . exon 1399 1493 . + . ID=g11788.t1.exon1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . CDS 1466 1493 . + 0 ID=cds.g11788.t1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . exon 1894 1995 . + . ID=g11788.t1.exon2;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . CDS 1894 1995 . + 2 ID=cds.g11788.t1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . exon 2349 2473 . + . ID=g11788.t1.exon3;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . CDS 2349 2473 . + 2 ID=cds.g11788.t1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . exon 2744 2807 . + . ID=g11788.t1.exon4;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . CDS 2744 2807 . + 0 ID=cds.g11788.t1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . exon 3148 3353 . + . ID=g11788.t1.exon5;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . CDS 3148 3272 . + 2 ID=cds.g11788.t1;Parent=g11788.t1 NODE_652_length_19562_cov_43.3583 . three_prime_UTR 3273 3353 . + . ID=g11788.t1.utr3p1;Parent=g11788.t1 #PROT g11788.t1 g11788 MMRTGALRMATVVRLASSATARPAVSLVAPALVARRHASSAAPASGMKSSAHWSAERVVSIGLLGLIPAAAFVPSTGIDLALAVVIPLHGHWGLEQVLIDYVPGKTANTIAINGLRVLTLATVVGLVYFNVHDVGITQGVKALWSIR* # PASA_UPDATE: g11792.t1, single gene model update, valid-1, status:[pasa:asmbl_8703,status:3], valid-1 # PASA_UPDATE: g11792.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8701,status:3], valid-1 NODE_652_length_19562_cov_43.3583 . gene 13846 18771 . + . ID=g11792;Name=g11792.t1 NODE_652_length_19562_cov_43.3583 . mRNA 13846 18771 . + . ID=g11792.t1;Parent=g11792;Name=g11792.t1 NODE_652_length_19562_cov_43.3583 . five_prime_UTR 13846 14327 . + . ID=g11792.t1.utr5p1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 13846 14516 . + . ID=g11792.t1.exon1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 14328 14516 . + 0 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 15059 15333 . + . ID=g11792.t1.exon2;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 15059 15333 . + 0 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 15734 15808 . + . ID=g11792.t1.exon3;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 15734 15808 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 16010 16102 . + . ID=g11792.t1.exon4;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 16010 16102 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 16378 16455 . + . ID=g11792.t1.exon5;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 16378 16455 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 16757 16828 . + . ID=g11792.t1.exon6;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 16757 16828 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 17267 17344 . + . ID=g11792.t1.exon7;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 17267 17344 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 17664 17741 . + . ID=g11792.t1.exon8;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 17664 17741 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . exon 18018 18771 . + . ID=g11792.t1.exon9;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . CDS 18018 18486 . + 1 ID=cds.g11792.t1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . three_prime_UTR 18487 18771 . + . ID=g11792.t1.utr3p1;Parent=g11792.t1 NODE_652_length_19562_cov_43.3583 . mRNA 13846 18771 . + . ID=g11792.t1.1.5b6be70c;Parent=g11792;Name=g11792.t1 NODE_652_length_19562_cov_43.3583 . five_prime_UTR 13846 15019 . + . ID=g11792.t1.1.5b6be70c.utr5p1;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 13846 15333 . + . ID=g11792.t1.1.5b6be70c.exon1;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 15020 15333 . + 0 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 15734 15808 . + . ID=g11792.t1.1.5b6be70c.exon2;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 15734 15808 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 16010 16102 . + . ID=g11792.t1.1.5b6be70c.exon3;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 16010 16102 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 16378 16455 . + . ID=g11792.t1.1.5b6be70c.exon4;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 16378 16455 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 16757 16828 . + . ID=g11792.t1.1.5b6be70c.exon5;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 16757 16828 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 17267 17344 . + . ID=g11792.t1.1.5b6be70c.exon6;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 17267 17344 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 17664 17741 . + . ID=g11792.t1.1.5b6be70c.exon7;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 17664 17741 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . exon 18018 18771 . + . ID=g11792.t1.1.5b6be70c.exon8;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . CDS 18018 18486 . + 1 ID=cds.g11792.t1.1.5b6be70c;Parent=g11792.t1.1.5b6be70c NODE_652_length_19562_cov_43.3583 . three_prime_UTR 18487 18771 . + . ID=g11792.t1.1.5b6be70c.utr3p1;Parent=g11792.t1.1.5b6be70c #PROT g11792.t1 g11792 MHLGYRGVQDLRSRGRSGCAEWPLLVCRSRSVILPKIRHQLIYFKDLNVVQDSRHLNRSPNFKFPNRLVLQMESRRICAAAWRFSAVHVLVVCSVLSLVVVCASGASAAVTGPCHVPTSAGDTNVFQFCTCTDGFLVSCSYDKFNAGGALSITTLEILFNNNLREIGPGVFDPLTNLESLAFEYEKGLEGDPTPTTLPAGIFDKLINLQSLSLNYCKFMVTLPKNVFTPKLVSLTSLDFGYMSSLKLIRRGDLNLPALTYLDLSDCCDNSLSFEDGAFDLLPKLATVKFGNTKVSYLPSGFFYKNSQLDYTGIVDLKGTLNNPGGMMGCGDNWPHCVQPTCMIAGGCFCDVGFTGPDCLTPCAGGKYGEDCRFNCATDCINSAGACSSTAGCPCKKGWVGSRCDVSASYDGTQPGAGGSGSNTGAIVGGVIGGVAGVALIAGGIFYWHRNRSGHSNGYTTMPTTSHAL* #PROT g11792.t1.1.5b6be70c g11792 MLGFCAKWAVCMQFPNRLVLQMESRRICAAAWRFSAVHVLVVCSVLSLVVVCASGASAAVTGPCHVPTSAGDTNVFQFCTCTDGFLVSCSYDKFNAGGALSITTLEILFNNNLREIGPGVFDPLTNLESLAFEYEKGLEGDPTPTTLPAGIFDKLINLQSLSLNYCKFMVTLPKNVFTPKLVSLTSLDFGYMSSLKLIRRGDLNLPALTYLDLSDCCDNSLSFEDGAFDLLPKLATVKFGNTKVSYLPSGFFYKNSQLDYTGIVDLKGTLNNPGGMMGCGDNWPHCVQPTCMIAGGCFCDVGFTGPDCLTPCAGGKYGEDCRFNCATDCINSAGACSSTAGCPCKKGWVGSRCDVSASYDGTQPGAGGSGSNTGAIVGGVIGGVAGVALIAGGIFYWHRNRSGHSNGYTTMPTTSHAL* # PASA_UPDATE: g13651.t1, single gene model update, valid-1, status:[pasa:asmbl_7655,status:3], valid-1 NODE_482_length_22816_cov_40.6102 . gene 6612 7970 . - . ID=g13651;Name=g13651.t1 NODE_482_length_22816_cov_40.6102 . mRNA 6612 7970 . - . ID=g13651.t1;Parent=g13651;Name=g13651.t1 NODE_482_length_22816_cov_40.6102 . five_prime_UTR 7862 7970 . - . ID=g13651.t1.utr5p1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . five_prime_UTR 7716 7752 . - . ID=g13651.t1.utr5p2;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . exon 7862 7970 . - . ID=g13651.t1.exon1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . exon 7704 7752 . - . ID=g13651.t1.exon2;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . CDS 7704 7715 . - 0 ID=cds.g13651.t1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . exon 7368 7547 . - . ID=g13651.t1.exon3;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . CDS 7368 7547 . - 0 ID=cds.g13651.t1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . exon 7047 7157 . - . ID=g13651.t1.exon4;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . CDS 7047 7157 . - 0 ID=cds.g13651.t1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . exon 6612 6775 . - . ID=g13651.t1.exon5;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . CDS 6764 6775 . - 0 ID=cds.g13651.t1;Parent=g13651.t1 NODE_482_length_22816_cov_40.6102 . three_prime_UTR 6612 6763 . - . ID=g13651.t1.utr3p1;Parent=g13651.t1 #PROT g13651.t1 g13651 MSYQAADSKKEEFRRYLEKSGVIDSLTKVLVGLYEEPEKPSNALDFIKQYLGAPAGVDVDQLKEENEALKKEIDELKKEIDNLKRPLGASSEGAAQAEGEQSAE* # ORIGINAL: g13650.t1 original gene structure, not modified by PASA NODE_482_length_22816_cov_40.6102 AUGUSTUS gene 2077 6287 . + . ID=g13650;Name=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS mRNA 2077 6287 . + . ID=g13650.t1;Parent=g13650;Name=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 2077 2094 . + . ID=g13650.t1.exon1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 2077 2094 . + 0 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 2337 2475 . + . ID=g13650.t1.exon2;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 2337 2475 . + 0 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 2656 3176 . + . ID=g13650.t1.exon3;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 2656 3176 . + 2 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 3265 3718 . + . ID=g13650.t1.exon4;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 3265 3718 . + 0 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 3914 4657 . + . ID=g13650.t1.exon5;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 3914 4657 . + 2 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 4800 4897 . + . ID=g13650.t1.exon6;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 4800 4897 . + 2 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 5071 5198 . + . ID=g13650.t1.exon7;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 5071 5198 . + 0 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 5366 5450 . + . ID=g13650.t1.exon8;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 5366 5450 . + 1 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 5631 5869 . + . ID=g13650.t1.exon9;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 5631 5869 . + 0 ID=cds.g13650.t1;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 6119 6287 . + . ID=g13650.t1.exon10;Parent=g13650.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 6119 6287 . + 1 ID=cds.g13650.t1;Parent=g13650.t1 #PROT g13650.t1 g13650 MLGGAGQARKAVERYPVRINSGKEALQLKGIGDTIARMIDKRLHEINGGGAPARARDNKRPLSPMADPVQQPMRPPPAKPDAPAIRPPAAQPDYLREFVLNSEEEEELVASTAKRRGGRGRGGTRGGVRGGRGAGRGARPKPASPVHGAGQVVGEVHDDEPATPRHRPVPHRGANKRTYVPVYRSGAYAILVALRTATRGVGHVGFLRKQELMDAAQEHSDTSFVATDGFYSAWSSMSTLSDKGFVIRAGSPARYSLTPAGIELADKLLSTTNEFGGQSQTFHDDYDGLDGNADMSDVPPWPVEDPYAAPRRQSLGARSDNGFVGGDGSLAGMRGGFEPPRAQSNAVDHTPPKEFEFTYVNDRGCSVATRAEAGTSQSELGTMYRVRYRAGAPLGDRHVVADGEAGDGYVFGLLPEWEREGENVYRAAQALLPPNIRRTSLECRPAVTAEGSSFHTDYCSQASVASAEANLRATAGVPAHLIRGISITSVTSVADVRMAPALNRSHSSASAVSSAHLLSHAGPVGRTAPTINATRPILASQQSAVSDAASQVTEQETDYGPPFALRRGEFEVVLLVDLREVLGNRKDKNTIMDSLRSSGGIKMETRPLPVSDFLWIARETNPRAGAHPREVVLGFAIERKRMDDLASSIKDRRFQEQKFRLFYSGLTNVTLLVEEYGDMENAGLDADSLRQAMTNTQAQHGFHVKETQSLKDTASYLHLMSRRIAERFSHTTLNCDPNVKLDPSHGVRSGDESLGGCGKFQTYNAFAAQAEKSKPLALADMFALQLMQIHGVTPEKAKAITEAYPTPRILMDAYSELATDEERANMLSDIRYGKLVRNKTVGPTYSARIFHFYCDRVLPSEPFA* # PASA_UPDATE: g13654.t1, single gene model update, valid-1, status:[pasa:asmbl_7656,status:3], valid-1 NODE_482_length_22816_cov_40.6102 . gene 13864 20496 . - . ID=g13654;Name=g13654.t1 NODE_482_length_22816_cov_40.6102 . mRNA 13864 20496 . - . ID=g13654.t1;Parent=g13654;Name=g13654.t1 NODE_482_length_22816_cov_40.6102 . five_prime_UTR 20443 20496 . - . ID=g13654.t1.utr5p1;Parent=g13654.t1 NODE_482_length_22816_cov_40.6102 . five_prime_UTR 20033 20055 . - . ID=g13654.t1.utr5p2;Parent=g13654.t1 NODE_482_length_22816_cov_40.6102 . exon 20443 20496 . - . ID=g13654.t1.exon1;Parent=g13654.t1 NODE_482_length_22816_cov_40.6102 . exon 13864 20055 . - . ID=g13654.t1.exon2;Parent=g13654.t1 NODE_482_length_22816_cov_40.6102 . CDS 14252 20032 . - 0 ID=cds.g13654.t1;Parent=g13654.t1 NODE_482_length_22816_cov_40.6102 . three_prime_UTR 13864 14251 . - . ID=g13654.t1.utr3p1;Parent=g13654.t1 #PROT g13654.t1 g13654 MALTRTAILAAAVMALVATMAIADEASDDYTLLIPAADSFIEGEPFEVSVQSQNGAAIFEWEYSYTDVEDWKPLNSISSKDRKITITVSGDRQRTTLTLREAVSRWLQYRFRCSYIFDAIPAEKRYTDDVFVDLAQTNQVIFQAPQRNMADGKQIAEYWTTPDVPQPAFRRLAFRTLGKTSAGGTGGYFLNLVSSNVDPTDLTAQVTGSLSLTTSIGPDSYFEVIDQYCALKLTRSPITSAEALNIKTNVPGVIEARMRNAGLGFTSLKFFFANDIQPVRSSDQNKEYTILFYMRDYTTGMQINNGVIRRGLGLAATSTVVAGENSEVTDRSIPAQDAALTSLSTALGTAITGVVAKFELHHYATIRSASNFFLRAANPTTMETKITEFASDENLQWFLNSNGDSTSTEPLPFQSLLTKFNFKSKPFGSFLTLKITGFDGQSTPQAITTFALDPAQANASPFSYTDTPAFLLTDSGVNGEVPWLWAAQRCAEYTSESRLVQNVQACQALPNNPTYRRLELDLNGFFGVTTVSIAMPNYPFPSDPLLWAASLPKFASNSTKSRLELWGSTDGLNYVDLTDSVNSARTTCSNGEPTKAGQPCTVAFAVQDYTRSVLGKSGNFGWRYFRIVFGGMERQSDRLLTADRYFAASEIKFTGYCICNGHSNKCDIKTGRCYEADAIVANQPDDIFRCQHWTTGDHCDQCAPNTYVNYANDEPRDSYNCNVTSPDFQCDGPLLSEITPVEVESLQYRYGALRGNPVVVVDNSNVRFQYALAFQVFYSVAGPCVQCFCYGHSIYDDRTNLADRTIQGCNNVNGACFCSASSHTVNGDEKKCELCADAYCRTCDSRPSALGFEACRGNDCKACFCNGHATVKTGAGADKCDPDGCGCTCVAGDNVDGDECENCKPGYFSNTGNGKNSVSCTQCSCNGHKPAGVVGTFEECDVLGGNCDMDDSKCIDNTEGHNCQCCKPGFFRDSNDATLPCKPCACNGHGDATATWDFKNGCGVQAAECNPIGGVCACKVADHVHGDHCESCNVGYWNAAGDSKDGKTCTACFCFGHKGVTNECAVKGGDCNFKYDGTTPDKCAGNTVGASCEVCKPSFKYNDRTKVLNPVGTNFPVAPVTDIRFESCSACNCNGHSKENPDVGSGICDPVTGICINCGDNTANGADGECERCSANFFRNLNTKYDRTKDTCDACALTGGDCAAETLASSCRPCSGQCFGPNKACDEFTGECTSCTASNARGYRCERCVPGFYGEPKDGIQCEKCLCYQSEPSLWKWIANRNSVLSAPLRCDLDKTLEPRGCVLDQTALTPAIIAAVKDQTPTVPAVYSALTAAISCNCPADINNGTFNVVPYGSVYTGRQCSGCNNQAYFGRPTTCRTPNALAPLLPNGGCSEFFSCISCVCNRNIDESQAISNCNYDATSHVASGLRCTKCKGNTIGEECEQCDSGYYGNAKRTDTAGKLGTGYVLDNAGESLKCFKCDCNGQSVVRKDGLAGIPGDVCDTVGAANKDNFVCQCREDLGYIGAKCRQCKRGYQLKKGFNGDGQPDPLYDYCEPCPLCVLNVYSEGVIPLENAVWGLRSDLQILNASVSLLGGAVGGGFPDSLVTVLTTLRDSVDNLKLRVAALEGGNPANLCAVNPCQNGGSCAVVGNSVVCSCAGIAKGQFCEDNVDQCAGNPCQNGGTCTDGLNDYSCACTAAFTGKSCANAVITPCNPNPCQNGGVCSGEGVCACVNGYTGATCTSISTSIHDGVNALKLAANPIGASLVWRSTWSVSLYFRATDPNGVILYVYSAEVFDYISLYLKNGRLNFEVNAGVADFNTGNTRAFVDGTFTDGSWNKVTLTRTSTGITLTAMKADGSSAVTQTTLNRAGPVAVDAITNVYLGNGPAGSPAPFKAGLMGSIRFFRINDQSVNLSAGIGGNVVAQNDS* # ORIGINAL: g13653.t1 original gene structure, not modified by PASA NODE_482_length_22816_cov_40.6102 AUGUSTUS gene 10169 13055 . - . ID=g13653;Name=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS mRNA 10169 13055 . - . ID=g13653.t1;Parent=g13653;Name=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 11940 13055 . - . ID=g13653.t1.exon1;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 11940 13055 . - 0 ID=cds.g13653.t1;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 11708 11806 . - . ID=g13653.t1.exon2;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 11708 11806 . - 0 ID=cds.g13653.t1;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 11303 11425 . - . ID=g13653.t1.exon3;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 11303 11425 . - 0 ID=cds.g13653.t1;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 11011 11123 . - . ID=g13653.t1.exon4;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 11011 11123 . - 0 ID=cds.g13653.t1;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 10169 10841 . - . ID=g13653.t1.exon5;Parent=g13653.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 10169 10841 . - 1 ID=cds.g13653.t1;Parent=g13653.t1 #PROT g13653.t1 g13653 MARYRHLAAHRESKSSGTRTPPTRRAHKSYGDVLDPYVEVADRHPVVSGRPTGRTGPVYDSRLDMSGIYSSEAWPQTPEKPEFSEPEVVITTANGQRNHGREAQQQQHPVRHSPQITPRARDLRGPVASDARGGEGEDASATDSAAEEMRRIVKVEERVAEMQRQLRDRIDEQRARLRHSMASPSQNRTGSPISARSPSPTKGEARQGSAAEPHRTGAADAMVRVSSPTIRIPQEQQWQAPPRSPRPEEMPEPQAGAIAPAQPVRQPDDDPRVAKAARVRPDVDAHAWTEGRVQPQHRTPGVFDVAAVDGLALGRRPNSGGSTGRMSSSRHSGRAGVYMHEGREKLGAVARGYLVRLLMRSRKVRELMKEVADLERFLKDVTFDERSERQRTPAEERLVERVSHQLRQEKKTIHDIFFRWTPAEQMQLIARSRAATRELMFAHALENNNNPSPSRAADRWLSSATRRARERRSMMSDDGSKGSPAERPWSSRKDVVDRSGKSTQSSTTSVYSQSKMSGGGSSSRRKSASNNHPPATKTHTAVTSSGKRQQSNTHTHTRAPLPDLDEQLPQTHAYSSQAYAYGSETSGDESSLYAAGRAYEDSAMSATEEVDTNLNSTITKESPSSAPGSRIPRPVLDGAPVAVPSTPHRTRIVAPTPHSTPRGRAGSQGSSSSATARNAAGSPRTAASGRTAVSGAGRPSSGSVRRV* # ORIGINAL: g13652.t1 original gene structure, not modified by PASA NODE_482_length_22816_cov_40.6102 AUGUSTUS gene 8433 9944 . + . ID=g13652;Name=g13652.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS mRNA 8433 9944 . + . ID=g13652.t1;Parent=g13652;Name=g13652.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 8433 9944 . + . ID=g13652.t1.exon1;Parent=g13652.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 8433 9944 . + 0 ID=cds.g13652.t1;Parent=g13652.t1 #PROT g13652.t1 g13652 MSLAEELLADLEDIGNEEDDDDLSDDNDDAGAMYAGAGGEARDAEMADASAAGGDIDASLLKATDVRGVARLFYGARFASIQAQIAEHMKNDDAAGGQRREIVGPVEHDPEYKLIVSANNLTVEIDNEIAAVHKFIRDIYVKRFPELESLVLNSMDYIRTVKMVGNDMEVTKKDLASILPSAIVMVVTVTSSTTQGDPLLDEELTRVMEACDVAIALDEGKRRILHYVESRMSLVAPNLSAIVGPTTAANLMGIAGGLSALSKMPACNVQVLGSGRKNLAGFSTATSNVHAGCIFHSPFVQNLPSDFRTKAARLCAAKCTLAARIDSFHQAVDGSEGMKLRDDIMKKMDKAQEAPPAKVVKPLPAPDEAPRKKRGGKRARRMKERFAVTEVRRQANRMQFGTEGEDNYQREGGQSIGMVGKDGSGKVRAAKVDPRVKVGMSKKLQKELQKTITAKSATSGLASSVCFTAVQGIEIINPHAAEKRAPEGNRYFSDGAGFLSGRK* # ORIGINAL: g13649.t1 original gene structure, not modified by PASA NODE_482_length_22816_cov_40.6102 AUGUSTUS gene 225 1316 . - . ID=g13649;Name=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS mRNA 225 1316 . - . ID=g13649.t1;Parent=g13649;Name=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 1133 1316 . - . ID=g13649.t1.exon1;Parent=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 1133 1316 . - 0 ID=cds.g13649.t1;Parent=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 579 986 . - . ID=g13649.t1.exon2;Parent=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 579 986 . - 2 ID=cds.g13649.t1;Parent=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS exon 225 388 . - . ID=g13649.t1.exon3;Parent=g13649.t1 NODE_482_length_22816_cov_40.6102 AUGUSTUS CDS 225 388 . - 2 ID=cds.g13649.t1;Parent=g13649.t1 #PROT g13649.t1 g13649 MANAPDSWEDSLAEDVGQLSLKEKQAAAQAPAAQQSAPKLSIGAKPFVPNFSAPAFVPSWAAPPAQAAAAPAAVSPQPQPQAHVQPAPVAAPKAEVAAPPSPSPAVAAAAAVPTPTPTPAPTPVPVASPAASPSPKTPTPAKKEEHAKEDAEDDVEDVADDDGEEKKSKKQAALDKVAAEQPVDPREHLNIIFIGHVDAGKSTIGGHIMYLTGQVDKRTLEKYEREAKDKVGFEGEEERWINPQGVDDCVE* # ORIGINAL: g8712.t1 original gene structure, not modified by PASA NODE_1746_length_9430_cov_42.865 AUGUSTUS gene 101 1147 . + . ID=g8712;Name=g8712.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS mRNA 101 1147 . + . ID=g8712.t1;Parent=g8712;Name=g8712.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 101 1147 . + . ID=g8712.t1.exon1;Parent=g8712.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 101 1147 . + 0 ID=cds.g8712.t1;Parent=g8712.t1 #PROT g8712.t1 g8712 MVPTVGANYQGGLYRIIGTLIGSLVAYIAYTAFGPDPYALCATCFVFSVPCMHVRVNTQYARMGMITLLTFAAVLLAKYENRDNPDYSSIGVLAYKRIITIGLGCVVVIIFGSFLWPYIARKELRVRLSDSMHLIALLYSHTMAAVIEGSTYRDPHFGATATAFEGQIQRAIYAHRSMLASTVNEPRVREPFRADVYAHVLDDFQELLDRLVLMRIAAIRGFSQQVQDEIIYGLNHLRRELIACVLTALYVLGGSLSSKTPLPPYLPDYRKAYERLITASQKKTHDRLPSRSDRDMFYVNFSAYAVQSLHVIVQLDDLGRLLRELFGEDDIVERAYRRLAERVAEDTV* # PASA_UPDATE: g8714.t1, single gene model update, valid-1, status:[pasa:asmbl_2507,status:3], valid-1 NODE_1746_length_9430_cov_42.865 . gene 5015 6673 . - . ID=g8714;Name=g8714.t1 NODE_1746_length_9430_cov_42.865 . mRNA 5015 6673 . - . ID=g8714.t1;Parent=g8714;Name=g8714.t1 NODE_1746_length_9430_cov_42.865 . five_prime_UTR 6508 6673 . - . ID=g8714.t1.utr5p1;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . exon 6321 6673 . - . ID=g8714.t1.exon1;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . CDS 6321 6507 . - 0 ID=cds.g8714.t1;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . exon 5928 6053 . - . ID=g8714.t1.exon2;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . CDS 5928 6053 . - 2 ID=cds.g8714.t1;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . exon 5015 5512 . - . ID=g8714.t1.exon3;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . CDS 5343 5512 . - 2 ID=cds.g8714.t1;Parent=g8714.t1 NODE_1746_length_9430_cov_42.865 . three_prime_UTR 5015 5342 . - . ID=g8714.t1.utr3p1;Parent=g8714.t1 #PROT g8714.t1 g8714 MGHGQTGGGAERIPEVALFSAGAGAFYGSALSAWHIRPQLKEQTIPIIRQTAKTITQNALSFAVIGTSYQAGKVAAEAAFFHGEESPESSAIGGFAAGLAFGFRNGGLKYALGTGALFATVSWLVGRAAVQSRPEDKRSFEYLRILQQPVASGDEHKGHH* # ORIGINAL: g8715.t1 original gene structure, not modified by PASA NODE_1746_length_9430_cov_42.865 AUGUSTUS gene 8504 9294 . + . ID=g8715;Name=g8715.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS mRNA 8504 9294 . + . ID=g8715.t1;Parent=g8715;Name=g8715.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 8504 8598 . + . ID=g8715.t1.exon1;Parent=g8715.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 8504 8598 . + 0 ID=cds.g8715.t1;Parent=g8715.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 8943 9294 . + . ID=g8715.t1.exon2;Parent=g8715.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 8943 9294 . + 1 ID=cds.g8715.t1;Parent=g8715.t1 #PROT g8715.t1 g8715 MDGPSNAVAAQVELDVGNIKNYRLEELKEFLRAFNQRTSGNKSVLYNNALVFLATCKSNERSRYISGYPAYADALNKLRGHRASTYEPHAAVNAALFRPPHPSAASALSGPALPPVRLSLLPPKSFVFPSVPFHDDVVTIIGPILSGE* # ORIGINAL: g8713.t1 original gene structure, not modified by PASA NODE_1746_length_9430_cov_42.865 AUGUSTUS gene 2252 4273 . + . ID=g8713;Name=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS mRNA 2252 4273 . + . ID=g8713.t1;Parent=g8713;Name=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 2252 2366 . + . ID=g8713.t1.exon1;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 2252 2366 . + 0 ID=cds.g8713.t1;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 2550 2656 . + . ID=g8713.t1.exon2;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 2550 2656 . + 2 ID=cds.g8713.t1;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 3045 3228 . + . ID=g8713.t1.exon3;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 3045 3228 . + 0 ID=cds.g8713.t1;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 3602 3687 . + . ID=g8713.t1.exon4;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 3602 3687 . + 2 ID=cds.g8713.t1;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS exon 4106 4273 . + . ID=g8713.t1.exon5;Parent=g8713.t1 NODE_1746_length_9430_cov_42.865 AUGUSTUS CDS 4106 4273 . + 0 ID=cds.g8713.t1;Parent=g8713.t1 #PROT g8713.t1 g8713 MGTQLFTEWKGWLEPAEIKFNRILEENPYYPYIRRDENFFEFRLRYRRAFLAAASAVISLMWMLIMIAFGQEKQEYFIVPIVGLLISFTVMVNYRNLRKYTINRTTNEYTFSEKKNHIYRGALHNIYVRLRRRRSGAGKPYYYLILNGYQMDQVILTGNCSNMEVMRELGQRLAGGLGINYFDEKNVSKFHVIRHTRSTKTGSIDFSGNDVFEVTVPVE* # ORIGINAL: g3362.t1 original gene structure, not modified by PASA NODE_2709_length_5378_cov_21.6472 AUGUSTUS gene 3711 4529 . + . ID=g3362;Name=g3362.t1 NODE_2709_length_5378_cov_21.6472 AUGUSTUS mRNA 3711 4529 . + . ID=g3362.t1;Parent=g3362;Name=g3362.t1 NODE_2709_length_5378_cov_21.6472 AUGUSTUS exon 3711 4529 . + . ID=g3362.t1.exon1;Parent=g3362.t1 NODE_2709_length_5378_cov_21.6472 AUGUSTUS CDS 3711 4529 . + 0 ID=cds.g3362.t1;Parent=g3362.t1 #PROT g3362.t1 g3362 MATTNNEQKSGKNSKQQSATSSNSNEPKIFRFDQVPIDKLKFTDPKIGKNGNQSIYINFEGQKLYLQTPKIRAPFGISDNSKYVEGDMSKVKCHINISFDDQVEEFRQFMEKLDEHIVNVAQENFPKWFAKFSKTIKKVDRVPEIYNPIVNHGKEENKGKYAPTMKCKLAYKGSKCRTLIYDRKQKELDIKEVEQGSNVIAIIQLSGLWFLPGTGAFGCTWTAEQIKVYGTSGLKPHAIVDDDGEGEDEAASSSDVEEVVEEVEEIEADDEN* # PASA_UPDATE: g6268.t1, single gene model update, valid-1, status:[pasa:asmbl_2860,status:3], valid-1 NODE_1871_length_8812_cov_38.5678 . gene 480 1658 . - . ID=g6268;Name=g6268.t1 NODE_1871_length_8812_cov_38.5678 . mRNA 480 1658 . - . ID=g6268.t1;Parent=g6268;Name=g6268.t1 NODE_1871_length_8812_cov_38.5678 . five_prime_UTR 1620 1658 . - . ID=g6268.t1.utr5p1;Parent=g6268.t1 NODE_1871_length_8812_cov_38.5678 . exon 1281 1658 . - . ID=g6268.t1.exon1;Parent=g6268.t1 NODE_1871_length_8812_cov_38.5678 . CDS 1281 1619 . - 0 ID=cds.g6268.t1;Parent=g6268.t1 NODE_1871_length_8812_cov_38.5678 . exon 480 1156 . - . ID=g6268.t1.exon2;Parent=g6268.t1 NODE_1871_length_8812_cov_38.5678 . CDS 809 1156 . - 0 ID=cds.g6268.t1;Parent=g6268.t1 NODE_1871_length_8812_cov_38.5678 . three_prime_UTR 480 808 . - . ID=g6268.t1.utr3p1;Parent=g6268.t1 #PROT g6268.t1 g6268 MNTDGHERAAARAVATPHADISEYERERERNIVRNNALLSELGLAASARSARNSGTGRPNNDASASGQRESTSVGMENCTSRKRRRSEDGIRDEGLYVRRSLRNIGKDVPYYKEVALPTPSRVRSVPHTDDGGPVCDDSSTRIISPRRGNSVAKATAATCAKDSSKNLFLDASALRQWLGKEIPPIGNQAKRAVMEIASTIAPRFAFFYIHILKNSSRCSLCVPDLQL* # ORIGINAL: g6269.t1 original gene structure, not modified by PASA NODE_1871_length_8812_cov_38.5678 AUGUSTUS gene 2012 7350 . - . ID=g6269;Name=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS mRNA 2012 7350 . - . ID=g6269.t1;Parent=g6269;Name=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 7273 7350 . - . ID=g6269.t1.exon1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 7273 7350 . - 0 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 6778 6924 . - . ID=g6269.t1.exon2;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 6778 6924 . - 0 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 6272 6582 . - . ID=g6269.t1.exon3;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 6272 6582 . - 0 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 5115 6040 . - . ID=g6269.t1.exon4;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 5115 6040 . - 1 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 4923 4999 . - . ID=g6269.t1.exon5;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 4923 4999 . - 2 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 4252 4520 . - . ID=g6269.t1.exon6;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 4252 4520 . - 0 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 3879 3968 . - . ID=g6269.t1.exon7;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 3879 3968 . - 1 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 3445 3581 . - . ID=g6269.t1.exon8;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 3445 3581 . - 1 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 2790 2876 . - . ID=g6269.t1.exon9;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 2790 2876 . - 2 ID=cds.g6269.t1;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS exon 2012 2562 . - . ID=g6269.t1.exon10;Parent=g6269.t1 NODE_1871_length_8812_cov_38.5678 AUGUSTUS CDS 2012 2562 . - 2 ID=cds.g6269.t1;Parent=g6269.t1 #PROT g6269.t1 g6269 MKPTHLPVGTCVSVRSLFANLPVRKQLYREAKARKTESKKVEELMIAYGVACPGLRMSLRNGAVQWQKASVSNEKEVVASLFGKSLSDDLQWYAHETSALPTFTDSRRLSHVASLGTSPNCNTNYIGNDNEHANGSGDQEGGDDGKCMRVRALLPRSGASFTHVTRTSADRSFVLMNKRPISLKECLNVVRAGVSAALSPDGADSKRWPVCVIAIEVPPSHYDVNVDPGKTTVMLAPHCLEWIVTVLSNILREAYGSSSSSNGDVTAASQVEMTQKPAVDRGMSSALLDLGSFDTACDENDTVVPHVSADAKENRPFDANMNAGTCDSTVTKSSVISEGQNEWNQDARDKRDERDGHGGRNGGADALVASNTTYAGLMSGRRDVESPAVRQPSTRNTSGAVRGSAMSAAASSGGYPSVSTHFGAVNVMHNNPKMLKRAVGGRSLGTKRSRDGDDSGDDGEGLESHSESDGGEFEQRVVEKRKTTQCSGAGNPQHLRTLDDILIRSASRAGSRSMDTIKEKGDVSNAPLTAATDTPPREVAVAYPHKRRRISCVPERSDDSSSCLGVIEPIGRVVFPASDAHSKGESVWTVRVGKSLWALDVTRAEEWLLSRRMLSEYELPRRPLKAKPPVDERSLGSPLAFSVLCRLSVQHAVAVTSHRHIISHPGLTSNGFLLERTKDVDGKTRIHLVEVCESIEGYGLGHLRELTELIVRRDAFLPSKCFIPGQSPADLTPYRPAVVRAFITGEASRLSQALTSNQKFTRSHIVDVCTRVTDALSLDQASARGLTDCNGGNELRLKNAESIQSHGHCIHPSTPFSLSDGREGRAFSALEGSGVVPSPISNSIGVRSSHAADEGVDTPQRNSMARLTSLACSHGKSVFVHISDIVGSAE* # PASA_UPDATE: g5225.t1, single gene model update, valid-1, status:[pasa:asmbl_1665,status:3], valid-1 NODE_1459_length_11163_cov_49.3386 . gene 6968 9923 . + . ID=g5225;Name=g5225.t1 NODE_1459_length_11163_cov_49.3386 . mRNA 6968 9923 . + . ID=g5225.t1;Parent=g5225;Name=g5225.t1 NODE_1459_length_11163_cov_49.3386 . five_prime_UTR 6968 7090 . + . ID=g5225.t1.utr5p1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 6968 7550 . + . ID=g5225.t1.exon1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 7091 7550 . + 0 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 7714 7811 . + . ID=g5225.t1.exon2;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 7714 7811 . + 2 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 7957 8093 . + . ID=g5225.t1.exon3;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 7957 8093 . + 0 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 8467 8625 . + . ID=g5225.t1.exon4;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 8467 8625 . + 1 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 9027 9309 . + . ID=g5225.t1.exon5;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 9027 9309 . + 1 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . exon 9458 9923 . + . ID=g5225.t1.exon6;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . CDS 9458 9847 . + 0 ID=cds.g5225.t1;Parent=g5225.t1 NODE_1459_length_11163_cov_49.3386 . three_prime_UTR 9848 9923 . + . ID=g5225.t1.utr3p1;Parent=g5225.t1 #PROT g5225.t1 g5225 MGSCLSCCRRGRSHKYAWVVADRDNVRTAVNFSLAQASPGAPEEHDSAPHASVVVGDGDDEDDSESTGAANSEDGNAAPVIKKMRRPKGLTGGAAVFTKLPENDVTISSLPVPVTPPPSRAYGHDVSPSTPRSPSPVQRVGPESFNKIKLLGKGDVGRVYLVSKKDNDELYAMKVLRKSDMIERKKIKRVLTEREILATARHPFIVTLCYSFQTEDKLYFIMEYCAGGEFFRMLQRLPNKRLTEDQARFYIAEVVLALEYLHVIGFIYRDLKPENILLHASGHIRLADFDLSKQVDMTGMPSLIKSSPLNSLAARGSASRSSIHIDTRQCASGFTNSFVGTEEYIAPEVIKGKGHSSCVDFWTLGILLYEMLYGSTPFKGVDRTETFERIMKGGLTLPKEPAVSRQGKDLIRRLLAPEQEQRLGFQHGASDVMRHSFFKGISFPMLHNTTPPIIPTLVHRLDTGNFRSFGENMIDDTDSVIDADELMSDDPFKSFKSVSRPQGQYMTP* # ORIGINAL: g5223.t1 original gene structure, not modified by PASA NODE_1459_length_11163_cov_49.3386 AUGUSTUS gene 633 3623 . + . ID=g5223;Name=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS mRNA 633 3623 . + . ID=g5223.t1;Parent=g5223;Name=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 633 645 . + . ID=g5223.t1.exon1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 633 645 . + 0 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 992 1213 . + . ID=g5223.t1.exon2;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 992 1213 . + 2 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 1761 2221 . + . ID=g5223.t1.exon3;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 1761 2221 . + 2 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 2660 2776 . + . ID=g5223.t1.exon4;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 2660 2776 . + 0 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 2940 3053 . + . ID=g5223.t1.exon5;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 2940 3053 . + 0 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 3220 3303 . + . ID=g5223.t1.exon6;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 3220 3303 . + 0 ID=cds.g5223.t1;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 3441 3623 . + . ID=g5223.t1.exon7;Parent=g5223.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 3441 3623 . + 0 ID=cds.g5223.t1;Parent=g5223.t1 #PROT g5223.t1 g5223 MDELDALLKDLQGAKPAAAPAAAPAPAAASSFSELDSLMADLSAPKKSTAVAHAAPVAPVKSSVDDLLADLQSFKPQQAKTDAPRASVDDLLKELQSGAAPKAPTNDLDAMMASLRMEPAAPVAAHTHAPAPAGGKKGNLDSILDNLQNEMDVLGVDTNRKGDCAACRKAIVGPVMTALGKSWHVEHFVCFQCRKPLGSTTFFEKDGSPYCEKDFHELFSPRCAYCNGPILDKCITALERTWHSDHFFCSQCGKSFENGAFMEKDGKAYCEEDYFNMFAPKCGGCDKPIMADSLSALGYQWHPTCFVCNDCNKGFDHSSFFEHEGRPYCEVHYHAQKGSLCASCQKPIIGRCVTALNKKFHPEHFVCAYCMKQLQKGSFKEDKGKPYCGGCYTKIFG* # ORIGINAL: g5224.t1 original gene structure, not modified by PASA NODE_1459_length_11163_cov_49.3386 AUGUSTUS gene 4196 6406 . - . ID=g5224;Name=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS mRNA 4196 6406 . - . ID=g5224.t1;Parent=g5224;Name=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 6378 6406 . - . ID=g5224.t1.exon1;Parent=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 6378 6406 . - 0 ID=cds.g5224.t1;Parent=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 6151 6235 . - . ID=g5224.t1.exon2;Parent=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 6151 6235 . - 1 ID=cds.g5224.t1;Parent=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS exon 4196 5959 . - . ID=g5224.t1.exon3;Parent=g5224.t1 NODE_1459_length_11163_cov_49.3386 AUGUSTUS CDS 4196 5959 . - 0 ID=cds.g5224.t1;Parent=g5224.t1 #PROT g5224.t1 g5224 METERDVGDGRGPEAYHELAARLKTLGLMRTLEIMKREWNERIDLGNGPSSLSDSGDAERVGADADYAVPARSDARARPAFDVEPIAADELAQLIARRQPLRRASSVGLPPALAAAKGITAASTSRRNSADRFPSLTRGRSMSLTGAQFEAIHELDKSGGATKLRSVSDDRDSGNGSIISSSSALHRASIARSSLSGCDIPPVLRGLSEASSLGMGSIPSLRQLEGVAIGRIGSIRSVASDADYDQFSLRIVCDKDHTITERQSAAEYPIVPNDIIAGRYKIVSLIASSVFGHAVHCIDVVSGSAVCVKIVRRESGYLEQGLDEIRLLRAVSLPGESYDDSDAILKFMDAFYYREQLFIVTELLRDNLFEHAKSVKKAAGAPYYTLARLRSIATQLLRALAHVHRLGVVHGDVKPENIVFKSRSECVVKLIDFGSGFYVGDSHRTYVQSRPYRAPEVILGTSLGTKMDVWSVGCVLAELYTGCVLFPSYSVAVMLARIESVLGPLSAQLIGEGVNAHKYYVRRSASTGDAESSDVDVALPKTEGGVVGKSAPQGFAIYERKGTSSCVILRPIPVPLVEVLATGAPTETPESLDGFARFIAFLLRPDPTERPTALEALDHAWLAES* # PASA_UPDATE: g8914.t1, single gene model update, valid-1, status:[pasa:asmbl_4996,status:12], valid-1 NODE_2781_length_5137_cov_39.2347 . gene 3933 5091 . + . ID=g8914;Name=g8914.t1 NODE_2781_length_5137_cov_39.2347 . mRNA 3933 5091 . + . ID=g8914.t1;Parent=g8914;Name=g8914.t1 NODE_2781_length_5137_cov_39.2347 . five_prime_UTR 3933 4018 . + . ID=g8914.t1.utr5p1;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . exon 3933 4128 . + . ID=g8914.t1.exon1;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . CDS 4019 4128 . + 0 ID=cds.g8914.t1;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . exon 4293 4436 . + . ID=g8914.t1.exon2;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . CDS 4293 4436 . + 1 ID=cds.g8914.t1;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . exon 4692 4765 . + . ID=g8914.t1.exon3;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . CDS 4692 4765 . + 1 ID=cds.g8914.t1;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . exon 4966 5091 . + . ID=g8914.t1.exon4;Parent=g8914.t1 NODE_2781_length_5137_cov_39.2347 . CDS 4966 5091 . + 2 ID=cds.g8914.t1;Parent=g8914.t1;3_prime_partial=true #PROT g8914.t1 g8914 MGLFVFFGCLFIVFGPAVAAFSSIVKDGQMVILMISGAFFWLVSVFLASILWYIVKPWRDEYVWVVIISVSLQELFRFLFYKLFRKAEKNLPLTDSTTISQFTRHKVSFVVGLGFGVMCGMIEANVFLSDSTGPGTLQSPGCAGSSFFIVS # ORIGINAL: g8913.t1 original gene structure, not modified by PASA NODE_2781_length_5137_cov_39.2347 AUGUSTUS gene 114 3373 . - . ID=g8913;Name=g8913.t1 NODE_2781_length_5137_cov_39.2347 AUGUSTUS mRNA 114 3373 . - . ID=g8913.t1;Parent=g8913;Name=g8913.t1 NODE_2781_length_5137_cov_39.2347 AUGUSTUS exon 735 3373 . - . ID=g8913.t1.exon1;Parent=g8913.t1 NODE_2781_length_5137_cov_39.2347 AUGUSTUS CDS 735 3373 . - 0 ID=cds.g8913.t1;Parent=g8913.t1 NODE_2781_length_5137_cov_39.2347 AUGUSTUS exon 114 598 . - . ID=g8913.t1.exon2;Parent=g8913.t1 NODE_2781_length_5137_cov_39.2347 AUGUSTUS CDS 114 598 . - 1 ID=cds.g8913.t1;Parent=g8913.t1 #PROT g8913.t1 g8913 MEVWAAAVEARAGALERHGAALHGDLARASEEIARRDARIRELEGEIARFASLHDEIAVEQNTRNVAASAQSQWATTEIAALQAALSSCRSERDSLRRIVESKDVRIRELGDMLTETGHKLDEALRQAHENARGAAKLQAESTQSQLAGVFALAAGSCGNHHNHNNNSNNNNQNHNNGNNNADAAQSTDFIRVASSGWARQEIETLTHRLTETEGELNRYKTELEKRTDELAELRKAIEDEDEAADALDASDGGVAVSTYAPGIARFGSVADRHIRLRESRERVRMLKQELASREEAWKKERRQLELRAEQLERRVAQLSDDCESARQLSLATKDKADSARIKATDAEARATAAEKRAFDAVRTLDDVRAESSRRIRALESEVEERLRLGAVAEEAHKAAVAAMREDAIAERKRRDNVETEVGAQLRRALESADRAKRELEVVRAEGSDCAGKCGRLEAEKDELAAEIRSLREEIVDCSRRMGEERASAAETVARFQDLLDRSVASRDQALELRRQEAKAREAVSQQMEADILEMRRELGIITRDRDKHRHELQQCQQQLTQMRSAAERQRAVQEEKDARTVKDIEEYKHRAEHADQLQARLSRAEADLLAMKTTDELRKARLEYEQRTYQVGHEAASKQEADRMHVLEERAMALERERMEMHQQFERREKEIRAEVSARAEQACARELATFRTTVVRRAETAEKDGKRLAVLLREARDELAKQTREIAQLVLERDRMAAVLDREELEAVRALRTARDAHTDEEVRAARAHSELAVHRRYGGGADDDGHLSSASGDSGVFGHSGLHDEGVTRGGLSKGKGRDKQPLRGAFGGGGDADADAALERTLKNERETDRLRREAAVLRRRLALVEEQNRTITGSGAGTGVLASRLASVSREKADLEANVRILAAALEKKERQNVQLETTVGHYRAELERSQSQSRSVWTPSENRPGSASNNNNNNDNGLGGAREHLGIPRQHQHSGGGGGGGGGREGARRTGGDFTHGRAGEAPSSARPSFPVSSTTRKPRAAVHVRMSPPINKAA # ORIGINAL: g13288.t1 original gene structure, not modified by PASA NODE_2159_length_7473_cov_61.0507 AUGUSTUS gene 335 6615 . - . ID=g13288;Name=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS mRNA 335 6615 . - . ID=g13288.t1;Parent=g13288;Name=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 5953 6615 . - . ID=g13288.t1.exon1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 5953 6615 . - 0 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 5336 5558 . - . ID=g13288.t1.exon2;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 5336 5558 . - 0 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 4721 4879 . - . ID=g13288.t1.exon3;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 4721 4879 . - 2 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 3329 3556 . - . ID=g13288.t1.exon4;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 3329 3556 . - 2 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 2711 2971 . - . ID=g13288.t1.exon5;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 2711 2971 . - 2 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 2132 2402 . - . ID=g13288.t1.exon6;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 2132 2402 . - 2 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 869 1917 . - . ID=g13288.t1.exon7;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 869 1917 . - 1 ID=cds.g13288.t1;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS exon 335 616 . - . ID=g13288.t1.exon8;Parent=g13288.t1 NODE_2159_length_7473_cov_61.0507 AUGUSTUS CDS 335 616 . - 2 ID=cds.g13288.t1;Parent=g13288.t1 #PROT g13288.t1 g13288 MGQAEPPRGGVAAVVVCQPSPAPKWMRRLGMRRKASAMSFRSTRAVVGYWMIPFVLLCSAGLVSLRSVLGDVRVDEALETQAEDVSASPAANVSSSFADGHQRSRRSLHETIEVPCTPNENSDEALFAVGYQWNNGRMRLLYTDAISGQGSQYMQGNGATAGGTPKTNFAVMYSGRMPYVVNLYRTRQQYPEEITKTGQWGAFFTRMASGNDDYGPFETWQSYIALMSMKPMTATLRVTTWLLTFDEKVADYGEGTGSIVVPSGPLGSVPKVVTRVTADTIDGDSYGFWLRVYVKDLTCFRPGHSTQCYDGTHPCGAYMTCAKLSSIMGTCTCPNELKVDPTSIFNCIDVNECAVTQPGTDTPSNVNNFYIFMYCGPRSDCRDKTGAVAGYRCDCREGYIAQGPMATKQGLYSRGVGFVDTPVCVPDIMHPFPIILNWFGEVIAQKPIQNKMTAFSPTLVKVPTNVQRYRDGLIDDTQTAQAPTAQGGAIYANSVNGGVLQLAFAFEIPGRDFTVSGAAETCSFSLSNLDPVTFLPVGSPYNAPNGLFVSNPSPSSATTARRDYILTIDLSKLGLQARAALYSFGVTVTCLVPDAGYQKPARTVVLRNIPFFYATTPPAVPSPTTALVVSKRVYPLGTTDVVVSWGTWGLSTSLQSVSDPSKCTNGEHLLITIKTFVNGKPKTGDITDDTQCMSARSLSLRVADSLSYQVILVVRDASGLATTAMTQFSVGPPDPTVDASKEPSVSCASGPIGKSMWAACIPNAVAYTDVFVQSDANLVDTIGSVSKDYYVHNAGSAPRFVKFDVVVGDGYAPSLRETPSTRTYSVDGTTYSLPVDLALSAGSFYTRFAATSSASVTVETKGRPIIIETTIPTAAAIGSRINFAGASAASWSFGLTSTLTTAKLWTLARAVPMGTSVAVGVSATLGGVAVGATMQMDRTLFANCARMTPKGATDTPYAWIPFDEGYGVDAENIVPGGVPVVMRTSDTKVVFDWVWLSASHRYVAIVDTTGLSPVSIVSPADVYSPVDGASVSLTVARPNNIVFAG # ORIGINAL: g7312.t1 original gene structure, not modified by PASA NODE_1958_length_8356_cov_40.5643 AUGUSTUS gene 123 2362 . + . ID=g7312;Name=g7312.t1 NODE_1958_length_8356_cov_40.5643 AUGUSTUS mRNA 123 2362 . + . ID=g7312.t1;Parent=g7312;Name=g7312.t1 NODE_1958_length_8356_cov_40.5643 AUGUSTUS exon 123 565 . + . ID=g7312.t1.exon1;Parent=g7312.t1 NODE_1958_length_8356_cov_40.5643 AUGUSTUS CDS 123 565 . + 0 ID=cds.g7312.t1;Parent=g7312.t1 NODE_1958_length_8356_cov_40.5643 AUGUSTUS exon 868 2362 . + . ID=g7312.t1.exon2;Parent=g7312.t1 NODE_1958_length_8356_cov_40.5643 AUGUSTUS CDS 868 2362 . + 1 ID=cds.g7312.t1;Parent=g7312.t1 #PROT g7312.t1 g7312 MRAALMQVSFATPEEMSAHMEEHTRARDHTAYASTAEANSITDAKKDKRSLISSVAGDILKRDAGAASAEGPLRQGKHADRQFGAGSTTAAVASHPGRPAAVTLVMYGHRLRRTKAKLKRKTPPKPRVIDFDRLWQLAERRKGPPPKRTLKLPYLRRNGGKRGARIWQARTFNKAFGYGADAERVKIAYVGERPQSQQSQVQPLQQGHVPLDGPLSSPSKQGGGKVSTMRTKKRFNLSPYKRKGKPRRRASESEPSLDTQGGDDGGGTYGEVDALDDVAAMGDDDDVDAFETKGSGAIRTHNRRRSDAAECDALPTQPKKKAKVDVSVPAGVELGPDGLPVKRKRGRPKGTRNGEGKGKARDRKAAAAAAASLPLLASAGPPASDVETASALAPQAQAQPQPIPAAARLPKLSRRDMLAKQAALAMEAARAKGGWQPGDDDFEEDDRGRHVDGSGSGSGSGDGTHTQGTEAPETISRFFDARPHQSAHSDFSDDFATFEGEPTSDDSEIHRDASSESNGAREHGEEDQSGGVATAPIATAPVMCASLLDVSVSEAKSADDPVTEAAKGVDQVGGSHVGFPGVLGSMHSPNRVSRIYAQPLRVPTLGALGAFAGLGSGVRGMPNPFGPVRPGQPGAPRGALIVEEA* # PASA_UPDATE: g7313.t1, single gene model update, valid-1, status:[pasa:asmbl_3105,status:12], valid-1 NODE_1958_length_8356_cov_40.5643 . gene 2929 8275 . + . ID=g7313;Name=g7313.t1 NODE_1958_length_8356_cov_40.5643 . mRNA 2929 8275 . + . ID=g7313.t1;Parent=g7313;Name=g7313.t1 NODE_1958_length_8356_cov_40.5643 . five_prime_UTR 2929 3010 . + . ID=g7313.t1.utr5p1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 2929 3092 . + . ID=g7313.t1.exon1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 3011 3092 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 3343 3488 . + . ID=g7313.t1.exon2;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 3343 3488 . + 2 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 3705 3836 . + . ID=g7313.t1.exon3;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 3705 3836 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 4094 4256 . + . ID=g7313.t1.exon4;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 4094 4256 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 4512 4610 . + . ID=g7313.t1.exon5;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 4512 4610 . + 2 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 4808 4986 . + . ID=g7313.t1.exon6;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 4808 4986 . + 2 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 5093 5233 . + . ID=g7313.t1.exon7;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 5093 5233 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 5552 5708 . + . ID=g7313.t1.exon8;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 5552 5708 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 6004 6117 . + . ID=g7313.t1.exon9;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 6004 6117 . + 2 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 6492 6565 . + . ID=g7313.t1.exon10;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 6492 6565 . + 2 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 6816 6959 . + . ID=g7313.t1.exon11;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 6816 6959 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 7166 7396 . + . ID=g7313.t1.exon12;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 7166 7396 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 7595 7772 . + . ID=g7313.t1.exon13;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 7595 7772 . + 0 ID=cds.g7313.t1;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . exon 8096 8275 . + . ID=g7313.t1.exon14;Parent=g7313.t1 NODE_1958_length_8356_cov_40.5643 . CDS 8096 8275 . + 2 ID=cds.g7313.t1;Parent=g7313.t1;3_prime_partial=true #PROT g7313.t1 g7313 MKLFGRSAHESHREADVPLRGTGGNVDAMVLALVECAYDNDEAARSTMHRSLKDLGQKKPLLVLSACHRFLRSNKKLSQGHRVLLLSVMRDVTSEVLHKLPQDMALGLVSLAAAELTATKDIIPEWQDVALTMLVTIASRYCAEVVDELLRRCDPGTSPHHYLVRALAELAIVHPTIIVASLKQILAKLVALMPAMKQDSIRIVMCAALCRFADAVYASEVAGSATVSRADFESGANGAFDVLASHWISSGEKSMNVFSQEKEAKKQARVASAEAIGLLADIVGRDKLESYVGKLVSAMLNLYKKKVDLYPLTKGLCLVIDVASVKCKGTLENHVDGIMTALHAQVGVAGSSTKQQFELLRCFEKIAVAFPGKVVQFILERLESPLEKNRIGTLDILRHVLNSTDINFGEKKKDLLDDLKPLINEQSFKARRALVQVVLALASRGYLDKDAGAPMVEFVARQCAVGEADQYFAEGGRGRTASMMQKVRPFFDSSEKRRANSDAKQLKAAAQASPSNPASASASGAGQSASAPTPVGDEEVSAVALRSLCGTALQSMASNSSALEPILWPMLLGFFVPAHWTEAAGVIADAIAVVAKRKRAANDPDYNVDFQKEGIPQPVAIISRAIVLCANPLEGNRRGAAIIRMLESLSPLMHPAVVDLWDDAMPKLLTMFD # ORIGINAL: g13937.t1 original gene structure, not modified by PASA NODE_1802_length_9160_cov_38.692 AUGUSTUS gene 230 1405 . - . ID=g13937;Name=g13937.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS mRNA 230 1405 . - . ID=g13937.t1;Parent=g13937;Name=g13937.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 1312 1405 . - . ID=g13937.t1.exon1;Parent=g13937.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 1312 1405 . - 0 ID=cds.g13937.t1;Parent=g13937.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 230 1164 . - . ID=g13937.t1.exon2;Parent=g13937.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 230 1164 . - 2 ID=cds.g13937.t1;Parent=g13937.t1 #PROT g13937.t1 g13937 MTGMAAPVVDDAAALLQPLTLRERYESLIEEGTKHPHKIPTLLDELRRLVLLEGLPTATADAAAVRPKLWKIFLRVGAIDADAYIGLVEKGRSSVYDKIRNDTFRTLKSDAVFLSRVSEDKLIRVLNAFANGHATTSTSTHSQQQQQQQQQQKPPLQQHQPSMQFSYVQGMNVLLAPLLYVMTEVEAFYSFDALLTSHCPMYVQPTLTGAHAGCRLLDQCLRAVDPDLFAHLASKNLSADVYALSPVLTLCASVPPLDQVLHLWDFIFAFGAHMGVLCVLAQFIAIRDQLLASTTPMKFLQKPPDLDAQKVIRIATAIARQLPDGLYDALTRHAFEDARPGR* # ORIGINAL: g13939.t1 original gene structure, not modified by PASA NODE_1802_length_9160_cov_38.692 AUGUSTUS gene 4562 9160 . - . ID=g13939;Name=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS mRNA 4562 9160 . - . ID=g13939.t1;Parent=g13939;Name=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 8970 9160 . - . ID=g13939.t1.exon1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 8970 9160 . - 2 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 8673 8756 . - . ID=g13939.t1.exon2;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 8673 8756 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 8297 8455 . - . ID=g13939.t1.exon3;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 8297 8455 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 7812 7942 . - . ID=g13939.t1.exon4;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 7812 7942 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 7086 7566 . - . ID=g13939.t1.exon5;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 7086 7566 . - 1 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 6692 6854 . - . ID=g13939.t1.exon6;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 6692 6854 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 6011 6417 . - . ID=g13939.t1.exon7;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 6011 6417 . - 2 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 5392 5718 . - . ID=g13939.t1.exon8;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 5392 5718 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 4969 5166 . - . ID=g13939.t1.exon9;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 4969 5166 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS exon 4562 4798 . - . ID=g13939.t1.exon10;Parent=g13939.t1 NODE_1802_length_9160_cov_38.692 AUGUSTUS CDS 4562 4798 . - 0 ID=cds.g13939.t1;Parent=g13939.t1 #PROT g13939.t1 g13939 LSSQSPGHSNAQDKNAPLKLEVEAKRNALTEADRLRQDVTDKLNKKSLAVTRKSEAIATLEEERDGIVKTYKRRTEQVTECQRKSVQCKKEIESVLVDIENAKATEDVGPEIARIGERIKEVSTAMDDVQAEQKEFKDHIRQFQDTGKKCREQIQQLEDVRRRRMEELRRLDKETHAAVEWLKNNRGMFREEVFEPACLTLQVRDPKYAKYIDMHIPRDDLVTFICQNREDQETLLREVRDKQRLRINVAVPPDAPLDRYRPGVPIEQLRARFYFDAYMIDLVEAPEAMKRHLCFRLRMHDVPVSLNAKTEDMTETLLSERTVGCFYTRTSKYFIRQTKYARSATVDNVRELTKHFFDISVDTERRDRLEKDFNEASRRLAAAESELRRAQEKESSLRTEDTELRKRRDTLNDIRKRRSLLQTSLDQKQRKLKELERQAAEAEQEVASVKDLLSANNAKRGRAALELCPLVAAMVEGTEDRMRHTFVVLQASHDASVAEARLQTANDEIKALQTQVKEITAEFEKAKAEARDLLAIAKEVQLTDELQDAFSLLPNDLDQLEEAIMDEQNRINVNANADGRVLEEYEQREIQIRAMENEAQNANDVLANHKTEIEKTKAKWLPQLRELFGKINENFSVSFERLGCAGEVALTESEDFDKFGVDIRVKFRAGEDLQTLTGMHQSGGERSVSTMLYLIALQQLTKCPFRVVDEINQGMDPNNERRVFSQIVDAASAPNTPQYFLITPKLLSGLEYNDKMRILCVFNGPTMIESDNWDLGKFIGALHVAKKPRVS* # PASA_UPDATE: g13938.t1, single gene model update, valid-1, status:[pasa:asmbl_2674,status:12], valid-1 NODE_1802_length_9160_cov_38.692 . gene 2058 3757 . + . ID=g13938;Name=g13938.t1 NODE_1802_length_9160_cov_38.692 . mRNA 2058 3757 . + . ID=g13938.t1;Parent=g13938;Name=g13938.t1 NODE_1802_length_9160_cov_38.692 . exon 2058 2268 . + . ID=g13938.t1.exon1;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . CDS 2058 2268 . + 0 ID=cds.g13938.t1;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . exon 2419 3150 . + . ID=g13938.t1.exon2;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . CDS 2419 3150 . + 2 ID=cds.g13938.t1;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . exon 3595 3757 . + . ID=g13938.t1.exon3;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . CDS 3595 3659 . + 2 ID=cds.g13938.t1;Parent=g13938.t1 NODE_1802_length_9160_cov_38.692 . three_prime_UTR 3660 3757 . + . ID=g13938.t1.utr3p1;Parent=g13938.t1 #PROT g13938.t1 g13938 MRTVLVALVVCAIAVEYADAATKDYYKLLGVSRSATPRQIKKAYHKLALTHHPDKSDDPNAADKFAEINNAYETLSDEQKRKEYDMFGAGGASQAGGGGGGGGGGGGDFPGTHFGGSGSKFTYSFNGGGGNGGFGDMFSNLFSQFAGGGAGAGAGGGGGFGGFDFGGFDFGFGGGQQKQQQQQQQRQQYQNAYASRGGSAGGARNAYGGSYGQGQGQGRPGESAQYGSRGSGSRGSSSHGTQNQGGGGAYGGGGGFGSRQYGSGSGSQRSGGYGGGAGGSAGSGSRAQGGSGGFGGARPTPRDYGKSSQSSQSSRSIGANCRTLCEGNRCRRVCS* # PASA_UPDATE: g4699.t1, single gene model update, valid-1, status:[pasa:asmbl_6085,status:12], valid-1 NODE_3457_length_3422_cov_50.0857 . gene 72 1108 . - . ID=g4699;Name=g4699.t1 NODE_3457_length_3422_cov_50.0857 . mRNA 72 1108 . - . ID=g4699.t1;Parent=g4699;Name=g4699.t1 NODE_3457_length_3422_cov_50.0857 . five_prime_UTR 1009 1108 . - . ID=g4699.t1.utr5p1;Parent=g4699.t1 NODE_3457_length_3422_cov_50.0857 . exon 756 1108 . - . ID=g4699.t1.exon1;Parent=g4699.t1 NODE_3457_length_3422_cov_50.0857 . CDS 756 1008 . - 0 ID=cds.g4699.t1;Parent=g4699.t1 NODE_3457_length_3422_cov_50.0857 . exon 72 202 . - . ID=g4699.t1.exon2;Parent=g4699.t1 NODE_3457_length_3422_cov_50.0857 . CDS 72 202 . - 2 ID=cds.g4699.t1;Parent=g4699.t1;3_prime_partial=true #PROT g4699.t1 g4699 MADETDAVRQRIAVLDVLIENVEKEITEVEGRLRGIDNELHQSRARKHAKLENDQVYYRDKESKLRDKESKLREEKNILLKQNRVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV # ORIGINAL: g10846.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 2 1077 . + . ID=g10846;Name=g10846.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 2 1077 . + . ID=g10846.t1;Parent=g10846;Name=g10846.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 2 1077 . + . ID=g10846.t1.exon1;Parent=g10846.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 2 1077 . + 2 ID=cds.g10846.t1;Parent=g10846.t1 #PROT g10846.t1 g10846 PPADARPAAPSGPTALVVGAGVIGLTTAHYLRANGLSVTVIEKNAVSADETSFQNGGILCPSLTRPWTAETNVVGKVLYSWFNPSYFMRVHTPALRDVDFWRWGRLFMFSNGEESVRRNTGHIAALALYSTNCYRSLIAGDAALGTGRPAIGSLQIFATAADIDLAMDRAGPIRDAGVAFSRLSREEVAAFEPVLEESGATNRIAGGLFSADDTTGDCRLFTRALQKRVEAEGVEVVFGETLLSVATDGKDRITGVVTDKGVRSADVYVLATASQTTPLVRKIGLNIPIYPVKVGDWGLTRILVGAVALACATVSCLHRRRVFVALRPMTDRRAVIASVLSSAFVRAFVPAFDGSAG* # ORIGINAL: g10847.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 1308 1763 . + . ID=g10847;Name=g10847.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 1308 1763 . + . ID=g10847.t1;Parent=g10847;Name=g10847.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 1308 1763 . + . ID=g10847.t1.exon1;Parent=g10847.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 1308 1763 . + 0 ID=cds.g10847.t1;Parent=g10847.t1 #PROT g10847.t1 g10847 MQGYSISAPIQPKYIGTLRSTVGDDAGHVYVAPMGTDMVRVSGFAEFAGYDRTLDQSRAQSLFAAAIKLLPQGFLDEKGAVFWTGCRPVSPDDVPFVGKTRYTNLYVNAGHGSKGWTLSCGSGKMLADIIVGVKPAIDPTPYSPDRFEKKK* # ORIGINAL: g10848.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 2844 4330 . - . ID=g10848;Name=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 2844 4330 . - . ID=g10848.t1;Parent=g10848;Name=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 4217 4330 . - . ID=g10848.t1.exon1;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 4217 4330 . - 0 ID=cds.g10848.t1;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 3791 3941 . - . ID=g10848.t1.exon2;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 3791 3941 . - 0 ID=cds.g10848.t1;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 3441 3524 . - . ID=g10848.t1.exon3;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 3441 3524 . - 2 ID=cds.g10848.t1;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 2844 3067 . - . ID=g10848.t1.exon4;Parent=g10848.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 2844 3067 . - 2 ID=cds.g10848.t1;Parent=g10848.t1 #PROT g10848.t1 g10848 MLDDGHLTDSQGRRVDFRNTIIIMTSNLGSHELAALPEGTPASFARDGVLAELRKYYPPEFLNRIDDVILFNRLSRGSMSDILTVRLKEIQKRLSGRKIELHLSQDARKWIADAGYDPAYGARPLNRVLQKHLMNPLAKHILDGAVREGESVRVDLKKDASDIIVRPNHKATPTKGTNDNLGPIEASDAL* # ORIGINAL: g10850.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 11985 15242 . + . ID=g10850;Name=g10850.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 11985 15242 . + . ID=g10850.t1;Parent=g10850;Name=g10850.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 11985 15242 . + . ID=g10850.t1.exon1;Parent=g10850.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 11985 15242 . + 0 ID=cds.g10850.t1;Parent=g10850.t1 #PROT g10850.t1 g10850 MADVTLGTPSLPTSSAATHHTHHTEEAVFVADNTHEAQMSGSIRIPPPLTSLGGQIPQRPDNNTVGSPMPDASLNATRPSQLVAVHHPQHVCGRIVRALKAPVVGFRRLPIVHKHNLLFLLVQLVLVLVIGLQVYFLYHDAQKTLQTQAASELQLLDITFNIKFDQMSFGFRGQSSNPAFRGYAVAPGVNYTYDAVKAILANEITTRQMEFSTLLTPAAVVLVGSNANRTGQVLNPGGIVSLAVQRKTQIRAASILPYADYLAENPPVFREKIDDYSPASAYHPVDTKAPSVIRYTATPVLAANGSGNVVGALLSGDIVNGKLPIVHNVVNAFSGGFAAVYSYDWKTVGADPQLITIAFSDASFSCLVTNNLGGFEPRREAMIEAAQGPTGAVVGYRTSISGSDVTVAVKQYSGLNGTFFIRGTLEDFSASSLHDSVVINCAFGVATLVVDGLAMYLLYLAFIFPMLLLHDKMRRGLFSEGDVVGVNSYEDLHSEEATEIDGLEKGADLDRHDEIGKLFFLYKKMVDAVRLHKQVWSLRTRMFHIFSIDEAKARHVANMTRRKPALEHSNSNVIAMMRKPIVHKLMLQNSKIRIRSNIKLVITNLIAVSMIGVQIWLTYRSTFDALSRQAASEVNIGTIAFSLKINQMGFGFRGDGDNTAVRATVDGLPSVETLANVVALLKQEITTRKIEYATLVGANKTIIASGNAPRVGQLFDPSGIVTEALEQRKQVKLVATITRAEYLREQPPIWQEKLGTAVADSALHPNASVADALLIRWTATPVYGYTAPTGPPLGVLVSGDIVNGKTIIVERILGAVDTGYSGIAYVNPDGVIRTATGVYVSGKGGVVAVDQISPGGAYQSSVLSALESGRTVTFRSSQYGGMTYAIKPIVSKTLNNVVVSSPNICVLIRGTKESETNDRLTEHYIFHGVSFAFIVGFQFAASFYLSVLCYRPLRTLAMGLLVKHLGLQPTSDKHPAASYLSAVEAANPYDTKSRDEVEWIVHAFMELDRMVDKLGVDAERGEDDDFRANAAHSIDVRIGDDDIRPDGTRDPETDGDHAQTALPRRPLLSAADGFVAKDSVMNLHF* # ORIGINAL: g10852.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 18900 20112 . - . ID=g10852;Name=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 18900 20112 . - . ID=g10852.t1;Parent=g10852;Name=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 20094 20112 . - . ID=g10852.t1.exon1;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 20094 20112 . - 0 ID=cds.g10852.t1;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 19721 19780 . - . ID=g10852.t1.exon2;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 19721 19780 . - 2 ID=cds.g10852.t1;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 19097 19342 . - . ID=g10852.t1.exon3;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 19097 19342 . - 2 ID=cds.g10852.t1;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 18900 18952 . - . ID=g10852.t1.exon4;Parent=g10852.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 18900 18952 . - 2 ID=cds.g10852.t1;Parent=g10852.t1 #PROT g10852.t1 g10852 MTAIARGRALALVTAAALGRAVPAPDVVAVDAALPRRAAARLHLLRAAARLRLLHAAARLHLLHAAALPLHVAARLHLLRAGARLRLLQGAARPLRHVAAPRRQSAAAAALPVPVALPAPALDGV* # ORIGINAL: g10853.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 22038 24230 . - . ID=g10853;Name=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 22038 24230 . - . ID=g10853.t1;Parent=g10853;Name=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 24131 24230 . - . ID=g10853.t1.exon1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 24131 24230 . - 0 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 23756 23881 . - . ID=g10853.t1.exon2;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 23756 23881 . - 2 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 23471 23527 . - . ID=g10853.t1.exon3;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 23471 23527 . - 2 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 23259 23362 . - . ID=g10853.t1.exon4;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 23259 23362 . - 2 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 22962 23048 . - . ID=g10853.t1.exon5;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 22962 23048 . - 0 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 22549 22643 . - . ID=g10853.t1.exon6;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 22549 22643 . - 0 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 22306 22421 . - . ID=g10853.t1.exon7;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 22306 22421 . - 1 ID=cds.g10853.t1;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 22038 22150 . - . ID=g10853.t1.exon8;Parent=g10853.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 22038 22150 . - 2 ID=cds.g10853.t1;Parent=g10853.t1 #PROT g10853.t1 g10853 MLRASVSLGGAISRMGRRAATMAPSSARQFTSTAGSGSNARHIFSAIAAPVAAGAAILAVGGLTVLAESQRKPFIAIHVDDATRGVLESVQDKEGSTVPFQGNVLFEKLCLDARKWVLTYFVRRNDQFMVEYMLETENVDEWTEVISAITHSWRQSKKISPDEHMRQLQMIARSHNQIKYWNVVDDDDPSDLTFEYGLDYRGAHEYHLFRIIAGANGMYVFNYTGKKTGAVEPTTEERKKWRAHLKSIPIVENGRVWDPKAQKSQ* # ORIGINAL: g10849.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 4508 10724 . - . ID=g10849;Name=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 4508 10724 . - . ID=g10849.t1;Parent=g10849;Name=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 10469 10724 . - . ID=g10849.t1.exon1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 10469 10724 . - 0 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 10159 10266 . - . ID=g10849.t1.exon2;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 10159 10266 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 9864 9896 . - . ID=g10849.t1.exon3;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 9864 9896 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 9693 9740 . - . ID=g10849.t1.exon4;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 9693 9740 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 9409 9510 . - . ID=g10849.t1.exon5;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 9409 9510 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 8999 9124 . - . ID=g10849.t1.exon6;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 8999 9124 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 8609 8692 . - . ID=g10849.t1.exon7;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 8609 8692 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 8213 8335 . - . ID=g10849.t1.exon8;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 8213 8335 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 7727 7836 . - . ID=g10849.t1.exon9;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 7727 7836 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 7311 7463 . - . ID=g10849.t1.exon10;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 7311 7463 . - 0 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 6921 7024 . - . ID=g10849.t1.exon11;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 6921 7024 . - 0 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 6537 6689 . - . ID=g10849.t1.exon12;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 6537 6689 . - 1 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 6174 6273 . - . ID=g10849.t1.exon13;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 6174 6273 . - 1 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 5661 5835 . - . ID=g10849.t1.exon14;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 5661 5835 . - 0 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 5369 5406 . - . ID=g10849.t1.exon15;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 5369 5406 . - 2 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 4983 5086 . - . ID=g10849.t1.exon16;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 4983 5086 . - 0 ID=cds.g10849.t1;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 4508 4613 . - . ID=g10849.t1.exon17;Parent=g10849.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 4508 4613 . - 1 ID=cds.g10849.t1;Parent=g10849.t1 #PROT g10849.t1 g10849 MAQLAASSAPRLRPALAFVRNARSFVSVAPAPRTAPPSLVSTAQRVSRGSPTSTPAIAFFLRSTVTAIRPLSVQLVPARGFSAQPLGSIRPDPNAKPQSLLAQFGHDVTQRARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESIKNKRVISLDLAGMVAGTKFRGEFEDRLKGILKEVEQSAGSLILFIDELHTLLGLGQGGGGAMDASNMLKPALARGELHLCGATTIQEYRKHIEKDAALARRFQSVLIEEPTVEDCISILRGLKEKYEVHHGVRITDPALVTAAVYSHRYITDRFLPDKAIDLVDEAASRLRLQQESKPEALENLDHAIITLKIELEALKKAGCLFFITLETDESSKERKLRVEKELDAKQKEANELTKEWTKEKQQLEGAKDARRKLDAARIELEQAQRSGDLAKAGEILYAQIPALEKQIESASQAIEGDKARLLSDSVTADDIARVISRATGIPVHALLAGEKSKLLNMEKGLESRVVGQREAVDAVAEAVRLSRAGLNTPNRPIASFMFLGPTGVGKTELCKAIAEYNFNAESALVRIDMSEYMEKFSTSRLIGAPPGYVGYEEGGVLTEAVRRRPYCVVLLDEFEKAHREARDN* # ORIGINAL: g10851.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 17339 17920 . - . ID=g10851;Name=g10851.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 17339 17920 . - . ID=g10851.t1;Parent=g10851;Name=g10851.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 17339 17920 . - . ID=g10851.t1.exon1;Parent=g10851.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 17339 17920 . - 0 ID=cds.g10851.t1;Parent=g10851.t1 #PROT g10851.t1 g10851 MDRAMRIRGCRTSVTALFIALFFIASPIVSILAENAPRSTSPNSIEDAYLPCPGVYCGRLVGDDGIIEREECGACPSGFRSNGFVCVRCDSSLGVYGWLYLLGNAMFVAGVQCALVGHVSSRRLPKRWVSNVSAIAEVLLASLVAILISDPIGTLDLRGCAVHGLSDFYSLFENPSIKYETTIDCTQEAAFPL* # ORIGINAL: g10854.t1 original gene structure, not modified by PASA NODE_253_length_29160_cov_40.8439 AUGUSTUS gene 24772 28756 . + . ID=g10854;Name=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS mRNA 24772 28756 . + . ID=g10854.t1;Parent=g10854;Name=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 24772 25098 . + . ID=g10854.t1.exon1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 24772 25098 . + 0 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 25368 25959 . + . ID=g10854.t1.exon2;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 25368 25959 . + 0 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 26230 26384 . + . ID=g10854.t1.exon3;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 26230 26384 . + 2 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 26595 26780 . + . ID=g10854.t1.exon4;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 26595 26780 . + 0 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 27230 27340 . + . ID=g10854.t1.exon5;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 27230 27340 . + 0 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 27626 27753 . + . ID=g10854.t1.exon6;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 27626 27753 . + 0 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 28079 28107 . + . ID=g10854.t1.exon7;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 28079 28107 . + 1 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 28307 28414 . + . ID=g10854.t1.exon8;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 28307 28414 . + 2 ID=cds.g10854.t1;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS exon 28635 28756 . + . ID=g10854.t1.exon9;Parent=g10854.t1 NODE_253_length_29160_cov_40.8439 AUGUSTUS CDS 28635 28756 . + 2 ID=cds.g10854.t1;Parent=g10854.t1 #PROT g10854.t1 g10854 MGRKGGAVRTPAPQVKATGSWNVSHKGDEAVFDATATAAENDSIVEKRLKKGRRVAALGGPSGFEHDWRPVDFAGMELSEMEGFNGLEELDGVDIEYVDSAAGREVRLKKVEPTKGLKRKMGDTDLFAGDDESGAKKSAKRAKSDAKAVPSADATEGSLPAGARTATSVSMIDLNLEEGDATNTKVEEKKKAAKKSATTKETDNKGSATADPAADRLTKEEMRRLAQQKKKRDKQRAKRLAGKKGKAAGAVGEGVGGVAGESTAEDAGDDAGDRATDDDAEDDAPEPVGEETADGIQAVAAEDSNEVEGVSAWDAYHLHSDILASLSRLGFATPTSIQSQTLPSAILGKKDILGAAETGSGKTLAFGLPILDHILRRCEGDDKKSGSRDGLIALIMTPTRELAVQINKHLIDIAKGTFIKIATVVGGLSSEKQKRQLDERPHIIVATPGRLWELIDGAHAYVADLTRLRFFVLDEADRMVQQGHYAELSSIIDRLPHQKGDRKELSKTNALRQTFVFSATLTLPVEKSRRNRPAKRDDDETQKTLEALVEKLGIQKGDYRVVDLTTKGTVAGGLTEAQIMCLTEEK # PASA_UPDATE: g2938.t1, single gene model update, valid-1, status:[pasa:asmbl_8504,status:12], valid-1 NODE_6172_length_625_cov_83.1582_potentialcontaminant . gene 1 309 . - . ID=g2938;Name=g2938.t1 NODE_6172_length_625_cov_83.1582_potentialcontaminant . mRNA 1 309 . - . ID=g2938.t1;Parent=g2938;Name=g2938.t1 NODE_6172_length_625_cov_83.1582_potentialcontaminant . five_prime_UTR 231 309 . - . ID=g2938.t1.utr5p1;Parent=g2938.t1 NODE_6172_length_625_cov_83.1582_potentialcontaminant . exon 1 309 . - . ID=g2938.t1.exon1;Parent=g2938.t1 NODE_6172_length_625_cov_83.1582_potentialcontaminant . CDS 1 230 . - 0 ID=cds.g2938.t1;Parent=g2938.t1;3_prime_partial=true #PROT g2938.t1 g2938 MAEEIGAVNQQIAAVEGLIVNVEKEISEVEGLLRDIENALRDPLRAGDRAELQRNQAYYRDEKSKLRDEKNKLRDE # ORIGINAL: g5703.t1 original gene structure, not modified by PASA NODE_3502_length_3324_cov_38.7224 AUGUSTUS gene 219 2402 . - . ID=g5703;Name=g5703.t1 NODE_3502_length_3324_cov_38.7224 AUGUSTUS mRNA 219 2402 . - . ID=g5703.t1;Parent=g5703;Name=g5703.t1 NODE_3502_length_3324_cov_38.7224 AUGUSTUS exon 2328 2402 . - . ID=g5703.t1.exon1;Parent=g5703.t1 NODE_3502_length_3324_cov_38.7224 AUGUSTUS CDS 2328 2402 . - 0 ID=cds.g5703.t1;Parent=g5703.t1 NODE_3502_length_3324_cov_38.7224 AUGUSTUS exon 219 2033 . - . ID=g5703.t1.exon2;Parent=g5703.t1 NODE_3502_length_3324_cov_38.7224 AUGUSTUS CDS 219 2033 . - 0 ID=cds.g5703.t1;Parent=g5703.t1 #PROT g5703.t1 g5703 MVAVLYLVRSPRETQAVEAIRLFLKNIAVPPDSLVFPLGDVVAANKPRVVRKHFNSKYVAVQKVDHPLSRLGFGLMGMMLTDVDSLVPDLNLASSASHTSPGSPSLSPRADRVVCTCGVAVTLGMPHGCVRSSTRPASYADSSHGWSGSKDSDAMSADEGNVVELELNADGELEEVHCFGRGLQVSSRMMREYEHTGLMRVKHKFHIFAQLLPLPPPGESDTASHSASLASSLHADVPPGVTDPILLCKMTCGVGLVKEGVDPIEGVVKKYLPPEDVSLYDISEVTRKSTGQQRAEGNRRASRDILQAQSESLCVAAGCETTDPWKEDLYKLLVHRSHRECDTFRPLVDAQQRLLDRLNRLGGKGTLTQDGGRGEDGGRGEDEEEAGGASADAQKRFPPFRVGDLEKVLLVMRDKSRAHHSVEYIPAHDGIKLAYRARMYGGSKPSDGDDKTATATATTPTTTTPTGRQQRQPQVNVIWVVGVMTNSFFWQANMEAISNEAKANVFMVDTRGHGLSGGPRGDTATATSFMKDIASFVQFVRWNHPGLPVILGGHGLGAAMILRYAGWAKRIPVDGYVFVAPILVMELVGRSRRELMQKSTTVAAIQLRLAPILDVLSRGKFGHSAFLKCE # ORIGINAL: g6628.t1 original gene structure, not modified by PASA NODE_2645_length_5556_cov_52.4205 AUGUSTUS gene 271 1867 . + . ID=g6628;Name=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS mRNA 271 1867 . + . ID=g6628.t1;Parent=g6628;Name=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS exon 271 339 . + . ID=g6628.t1.exon1;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS CDS 271 339 . + 0 ID=cds.g6628.t1;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS exon 631 723 . + . ID=g6628.t1.exon2;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS CDS 631 723 . + 0 ID=cds.g6628.t1;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS exon 924 1577 . + . ID=g6628.t1.exon3;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS CDS 924 1577 . + 0 ID=cds.g6628.t1;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS exon 1760 1867 . + . ID=g6628.t1.exon4;Parent=g6628.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS CDS 1760 1867 . + 0 ID=cds.g6628.t1;Parent=g6628.t1 #PROT g6628.t1 g6628 GDKEDCVASVLSLLTRLTFHLRQSEKEAKSERTRAEELEGSLESACATIEKLMEEKHMLSSRVSDLEDYIRGSDCARTGEHPSGSRAAHNTAHSLHPHTHGEWSSEDEELEWDENTSPAALREEDRRRSLEETTTRPPTTNSVYQPEKSQKSSVPARLVAVESNPQPPARSLSAVTFESAKARWAFRPIEHEQSSGNAVDMYKDASRAVHNYDGTDRASANAFADEFKEMKARGAAVRSGGTGSTGGVSAHVMAKSGNAVTVRVASGAKEGKVIDVRGQSNGVPAATPYVTVRNTPLKSRSFVAARD* # PASA_UPDATE: g6629.t1, single gene model update, valid-1, status:[pasa:asmbl_4712,status:12], valid-1 NODE_2645_length_5556_cov_52.4205 . gene 2335 4357 . - . ID=g6629;Name=g6629.t1 NODE_2645_length_5556_cov_52.4205 . mRNA 2335 4357 . - . ID=g6629.t1;Parent=g6629;Name=g6629.t1 NODE_2645_length_5556_cov_52.4205 . exon 3280 4357 . - . ID=g6629.t1.exon1;Parent=g6629.t1 NODE_2645_length_5556_cov_52.4205 . CDS 3280 4357 . - 0 ID=cds.g6629.t1;Parent=g6629.t1 NODE_2645_length_5556_cov_52.4205 . exon 2335 2907 . - . ID=g6629.t1.exon2;Parent=g6629.t1 NODE_2645_length_5556_cov_52.4205 . CDS 2546 2907 . - 2 ID=cds.g6629.t1;Parent=g6629.t1 NODE_2645_length_5556_cov_52.4205 . three_prime_UTR 2335 2545 . - . ID=g6629.t1.utr3p1;Parent=g6629.t1 #PROT g6629.t1 g6629 MMAFHRIVAGVFPSSKSAAASLTFKTWRHSSQQGRLFHSKPNDAHPSQSHLTVNNSSNKSNNSTDAVAAFESKLAAALEKRRELGTLRALTLGEDGGGQPLVDFSSNDYLGFARSTSLRERIARRLSQASARDDQLGSTGSRLLTGNSRAAESLETRVAEYHRGPAALLFNSGYDANIGFFGAVPQRGDVVFADELSHASVNEGLRLGRARRISFKHNSVSDLESKIKQHLASRLPAAAEGNMIIAVESVYSMDGDLAPLAELSTLCREYGALLVVDEAHATGVYGVGGRGLVYGMGLHEHVYARLHTFGKGMGCHGAAIVCPPTTRAYLVNYARSFVYSTALPNDSLVAINAAYDLMQDTANDAQSHLFRLVSLFKTTVAAEGLPADATIPSDSPIQGVLLGSNAAAVHAARALRGHGFLAYPIRAPTVPAGTERIRVVLHAHNTEAEVVAFARLLVRVWRAHKQSDNHEGSVNVAGL* # ORIGINAL: g6630.t1 original gene structure, not modified by PASA NODE_2645_length_5556_cov_52.4205 AUGUSTUS gene 5030 5431 . + . ID=g6630;Name=g6630.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS mRNA 5030 5431 . + . ID=g6630.t1;Parent=g6630;Name=g6630.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS exon 5030 5431 . + . ID=g6630.t1.exon1;Parent=g6630.t1 NODE_2645_length_5556_cov_52.4205 AUGUSTUS CDS 5030 5431 . + 0 ID=cds.g6630.t1;Parent=g6630.t1 #PROT g6630.t1 g6630 MEPNNNGSVITGTEVASAIASAASSQLLADVKASAAAAGEDEDDCDETSSESGDEMEEVDAETLAELRRRDFRTLSKKEKEIISRASKFKFVYDPNNPLSRNVSTSCVGNNVKPRHCIVHLKLKKVAHEMASP* # PASA_UPDATE: g13277.t1, single gene model update, valid-1, status:[pasa:asmbl_1484,status:12], valid-1 NODE_1404_length_11549_cov_37.2798 . gene 3406 11243 . - . ID=g13277;Name=g13277.t1 NODE_1404_length_11549_cov_37.2798 . mRNA 3406 11243 . - . ID=g13277.t1;Parent=g13277;Name=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 11084 11243 . - . ID=g13277.t1.exon1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 11084 11243 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 9982 10697 . - . ID=g13277.t1.exon2;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 9982 10697 . - 2 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 9141 9784 . - . ID=g13277.t1.exon3;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 9141 9784 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 8759 8946 . - . ID=g13277.t1.exon4;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 8759 8946 . - 1 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 8208 8353 . - . ID=g13277.t1.exon5;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 8208 8353 . - 2 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 7804 7974 . - . ID=g13277.t1.exon6;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 7804 7974 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 7401 7511 . - . ID=g13277.t1.exon7;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 7401 7511 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 7016 7154 . - . ID=g13277.t1.exon8;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 7016 7154 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 6561 6753 . - . ID=g13277.t1.exon9;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 6561 6753 . - 2 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 6079 6235 . - . ID=g13277.t1.exon10;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 6079 6235 . - 1 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 4901 5783 . - . ID=g13277.t1.exon11;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 4901 5783 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 4557 4664 . - . ID=g13277.t1.exon12;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 4557 4664 . - 2 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 4151 4281 . - . ID=g13277.t1.exon13;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 4151 4281 . - 2 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . exon 3406 3899 . - . ID=g13277.t1.exon14;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . CDS 3813 3899 . - 0 ID=cds.g13277.t1;Parent=g13277.t1 NODE_1404_length_11549_cov_37.2798 . three_prime_UTR 3406 3812 . - . ID=g13277.t1.utr3p1;Parent=g13277.t1 #PROT g13277.t1 g13277 MFAPMQLVCESAGGRYERNEECPPLCGCYVEGIDRESDCPVRTLNWRSDIYNYETGKFFDACQLIATPTDDWISTEADCTAACPECTYFLYNGCYDLTIPKDKCSTTSWSNVTMDCVADRGSSKAECEAGTGPFKWRQCGVNTVDDYYNSPAANCRKGRCIDDAYTKESKCTQASETNDYYTSWDYRKICFTSHVTAATCTSKNFTWRDDCEAACVDPILPQTFCASCRDDNTCSEVGSLSRCIAAVDTQDECTDPLVNGTWTRTLSLSNFECVLPAKSESECLPPDFCPTAIEPPSGWSTDGHEGVVRDCYGGCAIDQLPTEHACVQRIAGRGWHGSTSTCGLDVAVPVHERCLCYVDEFNTVELCNSAINGAVVTDNHPFLNITEGHVACFFYPSRFEGRDVCAYQHNQLPFTFARYTVFRIALPSGVWVDVTIEGLVTPEEGAAMISGAPIESLFFPSAPAPEGLTTFPDSSTWLSYERQCIADVPERICRGLYWADYGDFQGRCTTGDGTADSCAMASNAELKFTTHWTCGREKSYPQFDSYLDQQESICKEVPTLTWHSCAVDDFECRPYCEDTSRTDKESCEASRPWTFWSYQSAHGRGVCFTDLQRKKCIESGFDFHLRHIWIEGKYDSPEKCDGRCDVLPAETNTQEECEQAHECSETCRTCGAGHWQPRICVLTQVTTAEACDRLAHLSYNSILGIGWANGPKACFWGVTDPSKCKMDGYATRYDTCEMPMDQCELCISGSDKCPVAQGVLRCGINPWGRCDEAGCKAKERCDDVELSLWNATASAYTDGACLYPYSQFGNCPDGTTQTRIGCKSPQLVDPNNCPEGSTWVARATTEAECNARTGCSEPNFWAITRRTREECKVCQGTSKAQYAILKPTWNAGKWRPLSLVERKYDSVNKWTSGIDKKKLNAAMELAVTHKIATKMKSATMCLVARQYEVLKKFACACSGACPNEFVIPDPQRVGTDGASPDADGLPVLDEIGFGGVDDRSKGGHTLVIFTADSIAEGETARCQINYLSANTYAAQENGDAPVALTGTRRRRYTTPECLRYDLVRTAAEGTIVGRLLGDIHVVKIEGKAKIQLCMEKTVPAPGDDPLAAILTAPGFGKVSKEGKVFLESTDVTENARFICGDVVASGLYAPVRVAADAFTRITPVCGGDVSSGVNVAVIDGSTVYICVEDGTCYKSIETEKGVLFEVIADLRVDALLARDGATRIDPVDEGRPSFGFEVKGSRYVWAITKSGVYTRSSDPNATDSFRTRGYFKCGCNA* # PASA_UPDATE: g13276.t1, single gene model update, valid-1, status:[pasa:asmbl_1483,status:12], valid-1 NODE_1404_length_11549_cov_37.2798 . gene 73 3237 . + . ID=g13276;Name=g13276.t1 NODE_1404_length_11549_cov_37.2798 . mRNA 73 3237 . + . ID=g13276.t1;Parent=g13276;Name=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 73 143 . + . ID=g13276.t1.exon1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 73 143 . + 0 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 504 606 . + . ID=g13276.t1.exon2;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 504 606 . + 1 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 791 879 . + . ID=g13276.t1.exon3;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 791 879 . + 0 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 1166 1234 . + . ID=g13276.t1.exon4;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 1166 1234 . + 1 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 1624 1689 . + . ID=g13276.t1.exon5;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 1624 1689 . + 1 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 2155 2257 . + . ID=g13276.t1.exon6;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 2155 2257 . + 1 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . exon 2738 3237 . + . ID=g13276.t1.exon7;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . CDS 2738 2881 . + 0 ID=cds.g13276.t1;Parent=g13276.t1 NODE_1404_length_11549_cov_37.2798 . three_prime_UTR 2882 3237 . + . ID=g13276.t1.utr3p1;Parent=g13276.t1 #PROT g13276.t1 g13276 MSTVVFFPLERAVMFREYGNGTYRFVAYFISRVFVICYFQFLFSLAYCVVVYWMVGLKETFEAFVVYSAVCIGMGLIGCSLGVAVGSWVPNIHFAQTLLPPILFPLQLFSGYLIRPSNIPVYFKWIYYLSFFQYAFQLVIVNEFDGLQFDPCNPMEGQFCPLGGGTQTGEAVLDILDYSKNDFGRNFGILAGFFVFFLAASFVLMRHSARKKRT* # ORIGINAL: g7409.t1 original gene structure, not modified by PASA NODE_3904_length_2538_cov_42.203 AUGUSTUS gene 76 2209 . - . ID=g7409;Name=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS mRNA 76 2209 . - . ID=g7409.t1;Parent=g7409;Name=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 2077 2209 . - . ID=g7409.t1.exon1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 2077 2209 . - 0 ID=cds.g7409.t1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 1538 1838 . - . ID=g7409.t1.exon2;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 1538 1838 . - 2 ID=cds.g7409.t1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 1219 1387 . - . ID=g7409.t1.exon3;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 1219 1387 . - 1 ID=cds.g7409.t1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 914 1018 . - . ID=g7409.t1.exon4;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 914 1018 . - 0 ID=cds.g7409.t1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 474 543 . - . ID=g7409.t1.exon5;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 474 543 . - 0 ID=cds.g7409.t1;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS exon 76 206 . - . ID=g7409.t1.exon6;Parent=g7409.t1 NODE_3904_length_2538_cov_42.203 AUGUSTUS CDS 76 206 . - 2 ID=cds.g7409.t1;Parent=g7409.t1 #PROT g7409.t1 g7409 MLYVNAVRSALLFCERKRAAWARPGRDGIVRQPPVVINTQGWVKGMGHALLLELLRAARPTHIVHLTSHNVRAKTMPPLDADTLYAAHATPANMASMPLSLISPFATTADKDDMDDASRVTGARRPFRVFEVDASELSLAQGTSGAKFRGEDHRLMALAAYFLSSRTDIAASSSLSTPSLSELRPWKVRLDRMALRVMHAEVPPSQLLYSFNASVVGLVIDNSVAAEIMARTEASEVDGTEARLPFLLSRDTMGHCVGLGFVRAIDLEESSVYIITPVEPDVLMRVNCLLRGNIHLPVSMLLQ # PASA_UPDATE: g9151.t1, single gene model update, valid-1, status:[pasa:asmbl_536,status:12], valid-1 NODE_1141_length_13614_cov_60.5219 . gene 11977 13614 . - . ID=g9151;Name=g9151.t1 NODE_1141_length_13614_cov_60.5219 . mRNA 11977 13614 . - . ID=g9151.t1;Parent=g9151;Name=g9151.t1 NODE_1141_length_13614_cov_60.5219 . five_prime_UTR 13565 13614 . - . ID=g9151.t1.utr5p1;Parent=g9151.t1 NODE_1141_length_13614_cov_60.5219 . exon 13562 13614 . - . ID=g9151.t1.exon1;Parent=g9151.t1 NODE_1141_length_13614_cov_60.5219 . CDS 13562 13564 . - 0 ID=cds.g9151.t1;Parent=g9151.t1 NODE_1141_length_13614_cov_60.5219 . exon 11977 13415 . - . ID=g9151.t1.exon2;Parent=g9151.t1 NODE_1141_length_13614_cov_60.5219 . CDS 12063 13415 . - 0 ID=cds.g9151.t1;Parent=g9151.t1 NODE_1141_length_13614_cov_60.5219 . three_prime_UTR 11977 12062 . - . ID=g9151.t1.utr3p1;Parent=g9151.t1 #PROT g9151.t1 g9151 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQGFLVFHAFGGGTGSGFASLLMERLSVDYGKKSKLEFSVYPAPQVATAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVDGEGEEEGEEF* # ORIGINAL: g9147.t1 original gene structure, not modified by PASA NODE_1141_length_13614_cov_60.5219 AUGUSTUS gene 2094 4467 . + . ID=g9147;Name=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS mRNA 2094 4467 . + . ID=g9147.t1;Parent=g9147;Name=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 2094 2543 . + . ID=g9147.t1.exon1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 2094 2543 . + 0 ID=cds.g9147.t1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 2644 2724 . + . ID=g9147.t1.exon2;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 2644 2724 . + 0 ID=cds.g9147.t1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 2841 3011 . + . ID=g9147.t1.exon3;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 2841 3011 . + 0 ID=cds.g9147.t1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 3182 3302 . + . ID=g9147.t1.exon4;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 3182 3302 . + 0 ID=cds.g9147.t1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 3473 4149 . + . ID=g9147.t1.exon5;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 3473 4149 . + 2 ID=cds.g9147.t1;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 4429 4467 . + . ID=g9147.t1.exon6;Parent=g9147.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 4429 4467 . + 0 ID=cds.g9147.t1;Parent=g9147.t1 #PROT g9147.t1 g9147 MTLKIILALVATLFAASAVSSAPAVASTKVIPNASTRGMWVWGQWPAPLSDPTKADAFFKQLVSPFGISQWKINRIFMEFGRNNLITDATRIRQFIAKAHSYGIRVDNLDGNAEWTYTENKAIPKAICDEQIKFNAGATSPDQRLDGIHYDIEPHTLGAIWRTNAAGGKDNYNNELEANYMEIMRYCRTAFDSKDGGLVLGADVGHDYGQYVTDLFAEIMKGDSVDYLGIMNYFDTTPRFINGDPIEGGGVLPNLKLSTKVPMLFGSESIDVNSAPDWSSFNQEGYYPMESTLLAAKKAASSNPLFGGVAIHHYLSYFALKAGVDKGDSIDTNAPVIAHALSSRSSAVPTPVLDTSILNAPVQPAIPVILKPIRSIEDTDTNLLNPAILRVDPLAYVPVANDPEDPAAGVAAPPMTSAAAEILTSSPVSALGMPERPSTSVLSCAKRGGNATVVGLSAMVVCVVRTDTNTVVQPASGAAVIDSADELVEVELYTQFMGEQDCDGWIGNLACL* # PASA_UPDATE: g9146.t1, single gene model update, valid-1, status:[pasa:asmbl_535,status:12], valid-1 NODE_1141_length_13614_cov_60.5219 . gene 12 839 . - . ID=g9146;Name=g9146.t1 NODE_1141_length_13614_cov_60.5219 . mRNA 12 839 . - . ID=g9146.t1;Parent=g9146;Name=g9146.t1 NODE_1141_length_13614_cov_60.5219 . five_prime_UTR 737 839 . - . ID=g9146.t1.utr5p1;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . exon 678 839 . - . ID=g9146.t1.exon1;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . CDS 678 736 . - 0 ID=cds.g9146.t1;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . exon 363 495 . - . ID=g9146.t1.exon2;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . CDS 363 495 . - 1 ID=cds.g9146.t1;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . exon 12 152 . - . ID=g9146.t1.exon3;Parent=g9146.t1 NODE_1141_length_13614_cov_60.5219 . CDS 12 152 . - 0 ID=cds.g9146.t1;Parent=g9146.t1;3_prime_partial=true #PROT g9146.t1 g9146 MQEMAVHRIAIVGFGSESCTFSTLPTRRDDFVVLKGCDIYKRKFAFIPSITSEFGVDFVPIMYARAIPGGPLTKDAYDSISSDIVSGLAVEHAKSPFDGVYLNLHGAMHVV # PASA_UPDATE: g9149.t1, single gene model update, valid-1, status:[pasa:asmbl_537,status:3], valid-1 NODE_1141_length_13614_cov_60.5219 . gene 7690 9608 . + . ID=g9149;Name=g9149.t1 NODE_1141_length_13614_cov_60.5219 . mRNA 7690 9608 . + . ID=g9149.t1;Parent=g9149;Name=g9149.t1 NODE_1141_length_13614_cov_60.5219 . five_prime_UTR 7690 7787 . + . ID=g9149.t1.utr5p1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . exon 7690 7883 . + . ID=g9149.t1.exon1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . CDS 7788 7883 . + 0 ID=cds.g9149.t1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . exon 8029 8205 . + . ID=g9149.t1.exon2;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . CDS 8029 8205 . + 0 ID=cds.g9149.t1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . exon 8345 9386 . + . ID=g9149.t1.exon3;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . CDS 8345 9386 . + 0 ID=cds.g9149.t1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . exon 9499 9608 . + . ID=g9149.t1.exon4;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . CDS 9499 9596 . + 2 ID=cds.g9149.t1;Parent=g9149.t1 NODE_1141_length_13614_cov_60.5219 . three_prime_UTR 9597 9608 . + . ID=g9149.t1.utr3p1;Parent=g9149.t1 #PROT g9149.t1 g9149 MSLYEGISFSAGDAGELARAQAQQTNADGKKQVGVLEGWSSAAKLMAPQLLRKKQLQAKQPTKPVARKTAGVDAGAKPLQYAIAVSQQPLPDVDHGNVGDIINSSIENMYDPFRPNDYDDFCRWREEQRKNHEMEHRAHSPNSDSDYDDRSDEDSRHARGRQQQRTPHSIAIPPPPSMTSAQRPHRSRSRSRSRSRSRSRSRSRSRSRSPPVRARSPPPPLPPPAAVKVDLKMSGEEAYLRRMQMSGRTGAVPPPTGPPTTAPTPTGGFQGAGGIAGNVKDDVAQRMMQKMGWKHGQGLGRTEQGISEPLTVAKTGKNSGMILGPQIAGGASAVAVNAAPAPMPPPAQSTVTPPAVPAASDGPPLTELLKQPTKVVLLQNMVGPGEVDEGLQPEITEECSRFGPVERCLIFELPTSIVPAEEAVRVFVGFTRQESAIKALIALHGRFFGGRKVRASFFDEDRFAKFDLKP* # ORIGINAL: g9150.t1 original gene structure, not modified by PASA NODE_1141_length_13614_cov_60.5219 AUGUSTUS gene 10296 11168 . - . ID=g9150;Name=g9150.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS mRNA 10296 11168 . - . ID=g9150.t1;Parent=g9150;Name=g9150.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 10296 11168 . - . ID=g9150.t1.exon1;Parent=g9150.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 10296 11168 . - 0 ID=cds.g9150.t1;Parent=g9150.t1 #PROT g9150.t1 g9150 MLILSEGPSASPVAASVAQSADAASKNKSSLYKWRSYFQKRKAKHIIGLQAHCAVEVLGNATYERMSKGQKASFERVVGICNGFLIAFKPRGDSLKWQDLDTKFVFPRRAVKGAEEVDYAPLAANDVSFFTDPSGRRVIVRGRTREHTISLTLTGNQTFSRWENKLHELNMLVVKYDAVTFDCLADGDNGSALLRPATPKQAASSPKPTASGTLRLTPLPSVIGIASSATPTRSATMSSPVPKQIMVRASADNSVLVRRIAFDESLPTEQLAQMFSAEKNNQALRQSTAW* # ORIGINAL: g9148.t1 original gene structure, not modified by PASA NODE_1141_length_13614_cov_60.5219 AUGUSTUS gene 5302 7294 . - . ID=g9148;Name=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS mRNA 5302 7294 . - . ID=g9148.t1;Parent=g9148;Name=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 7185 7294 . - . ID=g9148.t1.exon1;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 7185 7294 . - 0 ID=cds.g9148.t1;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 6755 7048 . - . ID=g9148.t1.exon2;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 6755 7048 . - 1 ID=cds.g9148.t1;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 6299 6637 . - . ID=g9148.t1.exon3;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 6299 6637 . - 1 ID=cds.g9148.t1;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 5776 5869 . - . ID=g9148.t1.exon4;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 5776 5869 . - 1 ID=cds.g9148.t1;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS exon 5302 5433 . - . ID=g9148.t1.exon5;Parent=g9148.t1 NODE_1141_length_13614_cov_60.5219 AUGUSTUS CDS 5302 5433 . - 0 ID=cds.g9148.t1;Parent=g9148.t1 #PROT g9148.t1 g9148 MILEVLGGGALLMSGIALAGYHLAPEKVLDAFIVYNRYKTGMKLKSVRVDDEYDFAYIEGGRPASEAPTVLLIHGFTSNKDNWCGTAIHFIKDFHVVAVDMPGHGGTSRHHHHDHSIPELVRRLHLFTTTLGLAENGRRMHLMGQSMGGHIVGVYAATFPEQVASVTLICPAGIDPPHKSKLVRVFEETGRVTLLPTTPEEFTEMVSMVMYTPMKLPPPIVRVLAERGKRNYEFFGEFLKQMLSEATRFTLQGMLHKVAAPTLVVWGDSDDIIDVSCVKVILDNLPEGLGQSVILEKCGHSINMERPTELAQHSFAFMKNNC* # PASA_UPDATE: g11534.t1, single gene model update, valid-1, status:[pasa:asmbl_9510,status:12], valid-1 NODE_813_length_17399_cov_46.0428 . gene 13849 17399 . + . ID=g11534;Name=g11534.t1 NODE_813_length_17399_cov_46.0428 . mRNA 13849 17399 . + . ID=g11534.t1;Parent=g11534;Name=g11534.t1 NODE_813_length_17399_cov_46.0428 . five_prime_UTR 13849 13936 . + . ID=g11534.t1.utr5p1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 13849 14137 . + . ID=g11534.t1.exon1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 13937 14137 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 14330 14411 . + . ID=g11534.t1.exon2;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 14330 14411 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 14529 14766 . + . ID=g11534.t1.exon3;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 14529 14766 . + 2 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 14905 14971 . + . ID=g11534.t1.exon4;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 14905 14971 . + 1 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 15196 15375 . + . ID=g11534.t1.exon5;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 15196 15375 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 15750 15869 . + . ID=g11534.t1.exon6;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 15750 15869 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 16226 16337 . + . ID=g11534.t1.exon7;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 16226 16337 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 16475 16563 . + . ID=g11534.t1.exon8;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 16475 16563 . + 2 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 16780 16870 . + . ID=g11534.t1.exon9;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 16780 16870 . + 0 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 17065 17189 . + . ID=g11534.t1.exon10;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 17065 17189 . + 2 ID=cds.g11534.t1;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . exon 17356 17399 . + . ID=g11534.t1.exon11;Parent=g11534.t1 NODE_813_length_17399_cov_46.0428 . CDS 17356 17399 . + 0 ID=cds.g11534.t1;Parent=g11534.t1;3_prime_partial=true #PROT g11534.t1 g11534 MADAAGSSADDAASITFVDPITGETKQMSKNELKKREKLEKFAKKQAANKAAEAEKAAKAKDASPSDAKPKVDKKKEKKVEPEFVNTTPKGEHKDMSGPMAESYNPFAVESAWYDWWEKSGFFKPEYPEKSLRESYEKKGKKVFMMAIPPPNVTGALHIGHALTNSIEDCITRWHRMKGDMCLWNPGTDHAGIATQVVVEKKLAREQGKTRHDLGRENFVAEVWKWKETYGDRIYSQLRKLGSSLDWDRACFTMDPKLSRAVQEAFVRLHQTKKIYRANRLVNWCCTLKSAISDLEVDKKELTGRTLMTVPGHGDRKYEFGTLTSFAYKVEGSEEEIVVATTRIETMLGDTAVAVHPEDARYTHLHGKRVSHPFTGHTIPIIADSFVDPAFGTGAVKITPGHDFNDFEVGVRHNLPVVNILNDDGTINDYCAQFQGMKRFDARVAVLKA # ORIGINAL: g11533.t1 original gene structure, not modified by PASA NODE_813_length_17399_cov_46.0428 AUGUSTUS gene 10611 13052 . - . ID=g11533;Name=g11533.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS mRNA 10611 13052 . - . ID=g11533.t1;Parent=g11533;Name=g11533.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 11912 13052 . - . ID=g11533.t1.exon1;Parent=g11533.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 11912 13052 . - 0 ID=cds.g11533.t1;Parent=g11533.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 10611 11470 . - . ID=g11533.t1.exon2;Parent=g11533.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 10611 11470 . - 2 ID=cds.g11533.t1;Parent=g11533.t1 #PROT g11533.t1 g11533 MATEASELPQHAGEHITVTTPDGDTASTYHAGDLITVTTPDGDTASIMSGVSSMGASDRSEKPLYQPSPLRGAGYGWGLGWRDQAGIPRQRMNVDDADKASIIDEKEGLENPSFAFLLKYHGALGVGERGTKARDSAVAIIDQLKAVKGRPVRLQVDINEIVILSSTSGVVAKYAVCSVATCTMSDDQTYVAFIGTEDGRACLSRHNSMSSDIGGESDATKMRTSSTEAFTIEKSAAIHTCHVFSNESGGSTVGVARALAVLFRAAYKNFVTRAKDRDVAVGYTGLHWAAKAGQENLVSMWLRAGADVNARSRGGYTPLHLAALHNHIPVIKMLLAAGGDPSALDHGGRSPKDLVPLVARQPQQRPNPSQKSLSANPPAAASASPSERRQPLVTIRSGTFDGGIKQTAIESVSPASNRPEEYQMRRMTTVASTSRLSDDVRARTASFAGKPSSPLSSPRSMSFLGGKKKSEWVAVARAQQVVKGTDSAPGTPVTARKGGDEHSPKGGDEHSPKGGDELSPKGGDEQSPEGDGHGHSATAVARDDAAAAAAAAAAGVDAGVDSASSETDAEKSVSNIAASPREDASGVDDTGVGDAPAAHNDDAVDIDSAPVTLSSGVADGEEDGGGGETEKGRVASVPDLTVTADNNKPGTRDSIVLGDAHEHSEV* # ORIGINAL: g11532.t1 original gene structure, not modified by PASA NODE_813_length_17399_cov_46.0428 AUGUSTUS gene 1010 9796 . + . ID=g11532;Name=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS mRNA 1010 9796 . + . ID=g11532.t1;Parent=g11532;Name=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 1010 2063 . + . ID=g11532.t1.exon1;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 1010 2063 . + 0 ID=cds.g11532.t1;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 2298 3575 . + . ID=g11532.t1.exon2;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 2298 3575 . + 2 ID=cds.g11532.t1;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 3787 5385 . + . ID=g11532.t1.exon3;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 3787 5385 . + 2 ID=cds.g11532.t1;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS exon 5652 9796 . + . ID=g11532.t1.exon4;Parent=g11532.t1 NODE_813_length_17399_cov_46.0428 AUGUSTUS CDS 5652 9796 . + 2 ID=cds.g11532.t1;Parent=g11532.t1 #PROT g11532.t1 g11532 MWGLLKKSKVKSNAVVGVPTMQTAAAFSSAEKLCNAAREGNIDAMQAIMNNEGQTARAAGAQGLTPLHHAAKCGQERAIAWLVAAGANVNARDNVGRTAAHFAARGGHTPCVERLRELGGDMSARTADGRTPLHFAAIYGQTACLEALYKMSGVFASTVSVDGSSALHYAAANNHVDCVQFLVDANANANCADTEKRTPIHRAAEAGAVRCLGWLVSRGGDLNAPDVRGQTALHRAALKGHEDALEWMIAYGGRPDVRDHDGNTPVHLAAARGHFGTLDVLVDAGVSVGARNASGDTALHFAANNGHASCVAYLLSKGANPTDRNVEGHRASDLAPDDEAGTQCLEWLNADGAALRARNRVPDSPAAEFARAKRFYRVPNDEEDHRLDDSLVAAQLDVVMHASEQAQSIVEPDLSAKREEVERMNGKRPTVIARTTSNGHGHDSDNEDAELSGAPRSPMPQQRAFDRRNDLATTSQTSIRSNTLLTPRGNDTTPIMPRSPRPSHAVEEDDEVARTSAGMPGEISPTVEVRRASSPRELFAAGRGFALTLQDELGDAYLSPPTAAGTLGNMSPNRARSPVNISRARSPVNLYGTNDSDGWQSGRGSDSVRQDSNGHHSRISLLGLPTAGGPGTAAEVDDPSAGYIPSSPQVSRRSRMSIQATSEEDADHGNSASHSPVKTHAVSGDLGDSGHGTATDSTRRQDGDGDGDGDGDESFLHRDQSPPETRSGYLASPRRESYHTDSSLACSSIESVGRSSMNASFAAANHVAAEADHVQQDDAGHTSQLHSGYHDEDDAFSLVQSDEEDERSHANVIVVTPPTHSPPHEMPVVHDAAAQQPSPRSHVAATAAMRERSESDGGKKMMEDYIKALDLVDSLLEERGDDASSVSSLSDNGEEHEEDQRAIAVHLQAAMVADASPAPTAPLSAAAAASGAVLSGPSLLPVQELPTSSPSIATDGKTHTAVAVAPQSPSSTVAAPVAGRASHVASAHSVVRVSPATGVVVPTGAVAKVVAKLNASASEPATAITTTAHSVDGPANTSHPLKAALPPTAPTTVITSNSIVTSAVVVGPPPSSSNSAPRAMPALPNAAAVAKPVAVATVPKAGTSAPSVNATTTSHVTSAVAVTDVQGVSPRMSASAPPTDTSRGDSHSTTANAAASNSRLALPTRPVNVDLTHEPTLPATPAKELASTVDDAAVAAPPISPPTPTPSPALPASVSAPRPYAPATSAQTATHAVTPTKPRADHVTETGTPTRTQAPAAPQSGTPARARNEYVSDSRSPSGLSGDRPRSGSLGEQVVGTSQATEAWEMFDFQAKMTRIRGMLSIARGCRSRNVSQTPVVAASIADLLIAMESYERTRAERRRQRMPGDGESLLRMYESSSSYERALDDLRCCPPNDSQRLKLLRMSRDLARQEYLASVRSVLAEMSGFPSEQREQSAAHLLALSSAALTGAFAAVLALREYSENTGTRATHGMLGGDDPLSLSMSMGSTLAESTIREAMESARGGARGFKDSRNGIVDGSDDDECDDDGDGAASAVLQAMFQYISWRGKCETAGDTRSTETEARAKALGRALSRASRFLMDESPSSSASTATSSLADRRHTVSESDVGSASSRQRSLSSGAHTEEDDYDSLAYSVDQAVRDELRLFAGQRGGGIGVGGFESLCAREPAHHNDGAIPTVSFPLRPVLAAGRALVRELRRETVDCARLRFLKARLTRTAEWLEEGAQLAQQLGETGGQLLARLLTTRSALAAVEFKHIDRSGELEKVRLGAQFEPTKYGDAERVAAEAGIAAVRKERQFAMLAEEGERLNLARLYRDHLPEISTLCPVADTQNIAYSGLLLRPNRTFDHYDVDLVNPLSTSGGAGSATNPSASPGGPTNARRLGVYRATFAGVQVVLKEFFMGDAAGRRSLEREALALFRCAHPGGPLLIPDCLFHDKKTCRSYVQFPFMSGGSARDIIAAYSKRPTHGSMPATLEPNAVRRTLFVVLTALSRLHSCGVVHGRVSVDNILYHGDGRAVLADYDVSRVPVHQQPPLSSGADLRSPSGEISFQVPCAPSTPTPMPQTPTPMNNRLGMSLNSPLSNKLLSSSYASLASPAGGLPLPSPSSVSPAPRTRMKRVYSVDAIDFYAHSPRITAPELQRAPSLSSVAPASSMGGDVFSVGVALFRLAFPLVPTHEAHRTVLRIAADGEPMVPAHADASLVAFLAVLLKSDPTARIDAETALSHAYFAPLGDEERTACTGGTPDCGGLLLWKDASEWLSSLVGSKTVASDSTKSLRAQRIDFASGVMTLASHAADIAISRLDLDSAFREAGRSLLDTMAAAEHPGGAFGNDAAPASTAIATWERDTALLRATEAELEHTERGVQDGLCDRMLSHVNQDRLAAAGGGVVFSAPPPHWLLSSAEYPSSVRIDVTTEIARFVREMAGVPVTIPGSHAVAGGSIRIERVYRIECGTLWRQYVAARAIAEADVTAAEQYFAHTADDRMRDADARRNAHAGRPRSGSVSAALPIVSVAGAESRLGRGIPSELAVHAPSNEAWLFATLPEDEDPFRVATFGFSRPPLCPWLLGYQADSDSMTHADRADRVKEGKGAACTYVSPYGPLALDGKLPSGLTPGQCVFLCRVALGVTRGCEGEALLPRHEPHCSEGHPGWSCALHPRCHSAAVLDGGLSGEAIAKCILYDPAACYPELMIVVGRC* # PASA_UPDATE: g11841.t1, single gene model update, valid-1, status:[pasa:asmbl_3483,status:12], valid-1 NODE_2092_length_7768_cov_43.184 . gene 2067 3354 . + . ID=g11841;Name=g11841.t1 NODE_2092_length_7768_cov_43.184 . mRNA 2067 3354 . + . ID=g11841.t1;Parent=g11841;Name=g11841.t1 NODE_2092_length_7768_cov_43.184 . exon 2067 2148 . + . ID=g11841.t1.exon1;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . CDS 2067 2148 . + 0 ID=cds.g11841.t1;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . exon 2451 2866 . + . ID=g11841.t1.exon2;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . CDS 2451 2866 . + 2 ID=cds.g11841.t1;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . exon 3176 3354 . + . ID=g11841.t1.exon3;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . CDS 3176 3295 . + 0 ID=cds.g11841.t1;Parent=g11841.t1 NODE_2092_length_7768_cov_43.184 . three_prime_UTR 3296 3354 . + . ID=g11841.t1.utr3p1;Parent=g11841.t1 #PROT g11841.t1 g11841 MDSSEDVVMTDTQEADDGSSTDTSDDKHLDVSVAECSICLLAFCHAVELDCGHRFCFLCIKGVAQHNLSCPLCRQNIEPAFFNSPRLVHMEGGAATKPDSASPASTADLSRAAADDSTASWLYQGRNGWWRYDERTTAELETQYLADQTATVDMLIGGFMYSINFQDMLQVRKEDQRKRRKIMREITANAPASANVIGVAGLRGL* # ORIGINAL: g11843.t1 original gene structure, not modified by PASA NODE_2092_length_7768_cov_43.184 AUGUSTUS gene 7096 7752 . - . ID=g11843;Name=g11843.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS mRNA 7096 7752 . - . ID=g11843.t1;Parent=g11843;Name=g11843.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 7096 7752 . - . ID=g11843.t1.exon1;Parent=g11843.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 7096 7752 . - 0 ID=cds.g11843.t1;Parent=g11843.t1 #PROT g11843.t1 g11843 MLDMWAKNVGMRRARGEYLLNFIPDSLWNERIFEAFALQRLREDRLYLPYLLHSTTDIPEPTRRGGPEAIIDWMQSTTVADDKLFYDGNLSDRAKHGRNRMASTYVYWASGDFSLAHRSAVETKLRGYWETCYVRQVDSMYAWQARRKGMWYTYMDGFLYHQYHTQMKNLYFEVPGVITSAAEQTSRCAGFVVPQLFRLLDTNGDWGYRNVVFQEKVC* # ORIGINAL: g11842.t1 original gene structure, not modified by PASA NODE_2092_length_7768_cov_43.184 AUGUSTUS gene 4181 6300 . + . ID=g11842;Name=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS mRNA 4181 6300 . + . ID=g11842.t1;Parent=g11842;Name=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 4181 4405 . + . ID=g11842.t1.exon1;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 4181 4405 . + 0 ID=cds.g11842.t1;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 4609 4686 . + . ID=g11842.t1.exon2;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 4609 4686 . + 0 ID=cds.g11842.t1;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 4957 5096 . + . ID=g11842.t1.exon3;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 4957 5096 . + 0 ID=cds.g11842.t1;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 5393 5507 . + . ID=g11842.t1.exon4;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 5393 5507 . + 1 ID=cds.g11842.t1;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS exon 5758 6300 . + . ID=g11842.t1.exon5;Parent=g11842.t1 NODE_2092_length_7768_cov_43.184 AUGUSTUS CDS 5758 6300 . + 0 ID=cds.g11842.t1;Parent=g11842.t1 #PROT g11842.t1 g11842 MTNALDDAQQAFLRTFMAKRTMRKRDAEALLNKLTEREDGNIDRYVAAINLSLKPISLEIRRVVSEDDGDTVYGLANDLNDEHSKLATHWSATQVTFFKKIVEGIVDSSDGELSSIAVMNIVTPLSKADKQTMVSDCVRDGLMSDGLRKGYYTLGPRSLLELQSYLLSNHENDILKCQLCKQLVIKGQRCSNEECAVKVHLHCASRRWGQAANPKCDECGSVWAVRDVRQRADGGDNDANVRGKGKAPARDSDAAAGAGDAGAGAANDASTRPKRTRGQQSEEQEEEDAAAKQPTPPSRAKRSRRGNNEDEPSSGAATPLSESPVGGRRTRRRAAPDADGDDDGDSNNNSAASTPQATRRSGRRTK* # PASA_UPDATE: g11840.t1, single gene model update, valid-1, status:[pasa:asmbl_3482,status:12], valid-1 NODE_2092_length_7768_cov_43.184 . gene 524 1493 . - . ID=g11840;Name=g11840.t1 NODE_2092_length_7768_cov_43.184 . mRNA 524 1493 . - . ID=g11840.t1;Parent=g11840;Name=g11840.t1 NODE_2092_length_7768_cov_43.184 . five_prime_UTR 1457 1493 . - . ID=g11840.t1.utr5p1;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . exon 1149 1493 . - . ID=g11840.t1.exon1;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . CDS 1149 1456 . - 0 ID=cds.g11840.t1;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . exon 829 902 . - . ID=g11840.t1.exon2;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . CDS 829 902 . - 1 ID=cds.g11840.t1;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . exon 524 691 . - . ID=g11840.t1.exon3;Parent=g11840.t1 NODE_2092_length_7768_cov_43.184 . CDS 524 691 . - 2 ID=cds.g11840.t1;Parent=g11840.t1;3_prime_partial=true #PROT g11840.t1 g11840 MAEYKGASTEGGRATAMARQRVVAKEDYERQRQAIEQKHDLRVGKIGSKFATTQDAIEDQLKQDTVGLVTLDDFTARRERLQVEREKQLAKAAEAAAEAAKTNEEKKKKREQSRAALSFNLDEDEDGASDKDKSEEMPFKKFKVGKNPDVDTSFLPDRGREEAERAEREQLRQEWVAQQEKIK # PASA_UPDATE: g480.t1, single gene model update, valid-1, status:[pasa:asmbl_3689,status:12], valid-1 NODE_2176_length_7405_cov_38.9546 . gene 111 1037 . + . ID=g480;Name=g480.t1 NODE_2176_length_7405_cov_38.9546 . mRNA 111 1037 . + . ID=g480.t1;Parent=g480;Name=g480.t1 NODE_2176_length_7405_cov_38.9546 . five_prime_UTR 111 112 . + . ID=g480.t1.utr5p1;Parent=g480.t1 NODE_2176_length_7405_cov_38.9546 . exon 111 1037 . + . ID=g480.t1.exon1;Parent=g480.t1 NODE_2176_length_7405_cov_38.9546 . CDS 113 955 . + 0 ID=cds.g480.t1;Parent=g480.t1;5_prime_partial=true NODE_2176_length_7405_cov_38.9546 . three_prime_UTR 956 1037 . + . ID=g480.t1.utr3p1;Parent=g480.t1 #PROT g480.t1 g480 KSLRRACDRPLNCNFLHILTNPANVPGYRPYAHNAPRTPSHSMTPRNDRPYEYSAAFAPGTHVTPAAVAAATAAAAALKARTSSSSLVGTRDIPSVHAVGDVGSNHGVTLSKAEQPIGGIADGAVNPQLPAAAGTRDNHRDGERTWEGRGEVDGRRDRPARHDRSKERGYESRDERGTDRVQDDDGDDRRSRRRRSGSRERGFRRERRLRSRSRSRSRRRRQRRRSDDSPRSDASGSASDGGGGHRGHASRRKHTSARDGRSRSRDTSRERRRHRESDAR* # PASA_UPDATE: g483.t1, single gene model update, valid-1, status:[pasa:asmbl_3691,status:12], valid-1 NODE_2176_length_7405_cov_38.9546 . gene 6254 7302 . - . ID=g483;Name=g483.t1 NODE_2176_length_7405_cov_38.9546 . mRNA 6254 7302 . - . ID=g483.t1;Parent=g483;Name=g483.t1 NODE_2176_length_7405_cov_38.9546 . five_prime_UTR 7302 7302 . - . ID=g483.t1.utr5p1;Parent=g483.t1 NODE_2176_length_7405_cov_38.9546 . exon 7074 7302 . - . ID=g483.t1.exon1;Parent=g483.t1 NODE_2176_length_7405_cov_38.9546 . CDS 7074 7301 . - 0 ID=cds.g483.t1;Parent=g483.t1;5_prime_partial=true NODE_2176_length_7405_cov_38.9546 . exon 6254 6806 . - . ID=g483.t1.exon2;Parent=g483.t1 NODE_2176_length_7405_cov_38.9546 . CDS 6663 6806 . - 0 ID=cds.g483.t1;Parent=g483.t1 NODE_2176_length_7405_cov_38.9546 . three_prime_UTR 6254 6662 . - . ID=g483.t1.utr3p1;Parent=g483.t1 #PROT g483.t1 g483 VEAPVGDDIAQARQLGKHLVDILSNIRVQIRDKPKFLAAIKEIAVAIKDFLDSVGEVTTKNKSLKNNKKALEEHKKAFIKTSKTFSDTLKAYFKDDKQEPVVFSSADTLIKETTTIMDLLLQK* # PASA_UPDATE: g481.t1, single gene model update, valid-1, status:[pasa:asmbl_3690,status:3], valid-1 NODE_2176_length_7405_cov_38.9546 . gene 1133 2807 . - . ID=g481;Name=g481.t1 NODE_2176_length_7405_cov_38.9546 . mRNA 1133 2807 . - . ID=g481.t1;Parent=g481;Name=g481.t1 NODE_2176_length_7405_cov_38.9546 . five_prime_UTR 2784 2807 . - . ID=g481.t1.utr5p1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . exon 2720 2807 . - . ID=g481.t1.exon1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . CDS 2720 2783 . - 0 ID=cds.g481.t1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . exon 2445 2543 . - . ID=g481.t1.exon2;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . CDS 2445 2543 . - 2 ID=cds.g481.t1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . exon 2147 2322 . - . ID=g481.t1.exon3;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . CDS 2147 2322 . - 2 ID=cds.g481.t1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . exon 1671 2000 . - . ID=g481.t1.exon4;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . CDS 1671 2000 . - 0 ID=cds.g481.t1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . exon 1133 1485 . - . ID=g481.t1.exon5;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . CDS 1228 1485 . - 0 ID=cds.g481.t1;Parent=g481.t1 NODE_2176_length_7405_cov_38.9546 . three_prime_UTR 1133 1227 . - . ID=g481.t1.utr3p1;Parent=g481.t1 #PROT g481.t1 g481 MSVDTCESKPLFVPDYTELAAVLRECLSKNFQSVDVSVERTPDLTKSPYNLAREGICGHPRLVDVGGVPYLVPTPQPNANFDLKTISGMIHLPDAFFIGAGAGATDYIGINCELMTNAAVGAEERLLSKCAFVKDDNCILRDYTTSRFSLLGNLFASDGLPGNAIKIVARQRCGEENFVTCMRKGVAAAYPGQPVGLGGVFVIRKGKAKLHVMPHFSETPLLTDDDVHNWLKFFNFDSPLTCLSVFVTEDMGLDLRVEHTHCFSEHGVGGHYHYDTTPNDVEYEAYFVPGESMYRIGRPAASHGVGRD* # ORIGINAL: g482.t1 original gene structure, not modified by PASA NODE_2176_length_7405_cov_38.9546 AUGUSTUS gene 3604 5985 . + . ID=g482;Name=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS mRNA 3604 5985 . + . ID=g482.t1;Parent=g482;Name=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS exon 3604 3906 . + . ID=g482.t1.exon1;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS CDS 3604 3906 . + 0 ID=cds.g482.t1;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS exon 4026 4312 . + . ID=g482.t1.exon2;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS CDS 4026 4312 . + 0 ID=cds.g482.t1;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS exon 4514 4617 . + . ID=g482.t1.exon3;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS CDS 4514 4617 . + 1 ID=cds.g482.t1;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS exon 4819 5452 . + . ID=g482.t1.exon4;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS CDS 4819 5452 . + 2 ID=cds.g482.t1;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS exon 5715 5985 . + . ID=g482.t1.exon5;Parent=g482.t1 NODE_2176_length_7405_cov_38.9546 AUGUSTUS CDS 5715 5985 . + 1 ID=cds.g482.t1;Parent=g482.t1 #PROT g482.t1 g482 MLSSAQQLSPSGVKVAPSVIADTPTAQPQSPPAFDVSPSVSFSACGMRWPYHVGVAQYIYDNLDHADARIAITSGGAFAGSVLAAGLDPRYFLAEIYPEYEKYWQSRRLGCLLDDGERMLQILKQQIEMLEVDVRKLSGKLHIGVTRLPTLSHHIHSTFADENEILMAGFATACIPLVTSRRLPVVDGSYCADGGFRSMCPRLDSHTVRSYVAFSQPSWFAARDRGTLWGMGPIDARAGRSTIRDGADKRSPIVSTYDPTDDAAETRGYNPYASLSILRNACATAVSGGLLSTFQRGLALKEWYADKWGMLPFIGAYAGRPNGNNAAATPLVPDIILEPLTLDACEVGTSCTPSPAPRRESALRPHSDALDLSVKAPNTADDPAVTVDVRMQRGRKTRPPRPSDHVEFIRSFVSLPSREMIERWMAYGLEDARLAEEEDETGDSGIFTWRGWKTTDESPCIDKSGDSPVGENAYADRPCFDADDKEADTDAETHSSTQCLKDIHVTMGSKVSIQNSADSAAVNARDAVMAKE* # PASA_UPDATE: g11826.t1, single gene model update, valid-1, status:[pasa:asmbl_5170,status:12], valid-1 NODE_2878_length_4863_cov_38.2538 . gene 1621 4770 . + . ID=g11826;Name=g11826.t1 NODE_2878_length_4863_cov_38.2538 . mRNA 1621 4770 . + . ID=g11826.t1;Parent=g11826;Name=g11826.t1 NODE_2878_length_4863_cov_38.2538 . five_prime_UTR 1621 1622 . + . ID=g11826.t1.utr5p1;Parent=g11826.t1 NODE_2878_length_4863_cov_38.2538 . exon 1621 4655 . + . ID=g11826.t1.exon1;Parent=g11826.t1 NODE_2878_length_4863_cov_38.2538 . CDS 1623 4655 . + 0 ID=cds.g11826.t1;Parent=g11826.t1 NODE_2878_length_4863_cov_38.2538 . exon 4765 4770 . + . ID=g11826.t1.exon2;Parent=g11826.t1 NODE_2878_length_4863_cov_38.2538 . CDS 4765 4770 . + 0 ID=cds.g11826.t1;Parent=g11826.t1 #PROT g11826.t1 g11826 MSASARPVSARPTRSEQSASMPHIRSRPASASASPGRPNTAAGQSKSPNSSANSRGSRFLDIPGNTRRSLSPNNSLNMSTSSARSQGNVSRTSVTMLSSTRSNGSSVPAPVTSMRGTRVLGDDDLKEIAGIRALTRDDRQMSSKEWLEEHALATLDLTMKQILARVGFSHCKASEDLSAVVSSGETHARYCNGLFNHYRFKDGSMKHVYITEAQKADYEARIERCISEYKRRIRWLKTGSRAVFGVISEPKVVIVVDVSGLDREGMLILRQHLHLLLEEQLHSRRAFNFIAYGGEVNSWRPKTTMPDDLILRSASAWIENLRSGDGNNALKALTVAFADPSCDAVYLLARNVPGAVGGDGVTPGLVERLVVMNDETGIPVHAVAYGVVPGPERDVLRMVASLTGGRFHAYSEIKTEDEDKTDREKTIGGGSTRLGLDAGARAGDLARWVPQSDDLDVLRAEVQKGKDVIERIHSMRCEYLETLRDKQQQTLQKSLRGTGGRFERYPIDEPVSSAEWLAVNGMHAQRLTVYDALASSAFKHCDSARYCDGLTHFAWKDGTLMHIYVSDEAMTSYERRVAELLSRLRQRADWLREGSREVFGALTEQKVTVIIDTSGSMQPRMAFLRQMLVRLLDEQLSRMRRFNLIQCSTHASMWSPFMLPPTVGNVEAARDWISTLEAGGSTNAEEALAMAFADDDCEGIYFLTDGRPNQPEEIVMARVKELSKQHSVPVHTISFHIMDDVTDAFLRRLAGDTGGRYQVYSVEMEYTHPQHPTEGTLGTQSIPGIFPSPLPETPMVRRHGDDMRAILDEIAEAKRSLEQVRALRAACVNKGEGPPVEIRGDEWVEAVEDSGVQGADISINGRKLLSKRGGGKKGGVDDDNSRPSFSVTRPRYPIQGDLKDMVGANFDLVPLEAAKAREASARKKLRKKSAARKAAVGGSAVGMGSRGRRAGVDELRMASADWLAMFGLEKKGLSVLDAISGTAFSHRTSYVPSIKRHVCAKYCDDVFSHYQQ* # ORIGINAL: g11825.t1 original gene structure, not modified by PASA NODE_2878_length_4863_cov_38.2538 AUGUSTUS gene 48 892 . - . ID=g11825;Name=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS mRNA 48 892 . - . ID=g11825.t1;Parent=g11825;Name=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS exon 765 892 . - . ID=g11825.t1.exon1;Parent=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS CDS 765 892 . - 0 ID=cds.g11825.t1;Parent=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS exon 581 665 . - . ID=g11825.t1.exon2;Parent=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS CDS 581 665 . - 1 ID=cds.g11825.t1;Parent=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS exon 48 146 . - . ID=g11825.t1.exon3;Parent=g11825.t1 NODE_2878_length_4863_cov_38.2538 AUGUSTUS CDS 48 146 . - 0 ID=cds.g11825.t1;Parent=g11825.t1 #PROT g11825.t1 g11825 MADSPSRNLRSRAKHGSTESAVPPIAASPAIIDGEDVKATLKKTGKHFQTALWLVFAVQNWVLDFGRPIAMLWVPLELSPLNLPSVGDYFHMAYNVITPFCILT # PASA_UPDATE: g14336.t1, single gene model update, valid-1, status:[pasa:asmbl_7658,status:12], valid-1 NODE_4838_length_1214_cov_32.7243 . gene 218 950 . - . ID=g14336;Name=g14336.t1 NODE_4838_length_1214_cov_32.7243 . mRNA 218 950 . - . ID=g14336.t1;Parent=g14336;Name=g14336.t1 NODE_4838_length_1214_cov_32.7243 . five_prime_UTR 878 950 . - . ID=g14336.t1.utr5p1;Parent=g14336.t1 NODE_4838_length_1214_cov_32.7243 . exon 845 950 . - . ID=g14336.t1.exon1;Parent=g14336.t1 NODE_4838_length_1214_cov_32.7243 . CDS 845 877 . - 0 ID=cds.g14336.t1;Parent=g14336.t1 NODE_4838_length_1214_cov_32.7243 . exon 218 510 . - . ID=g14336.t1.exon2;Parent=g14336.t1 NODE_4838_length_1214_cov_32.7243 . CDS 218 510 . - 0 ID=cds.g14336.t1;Parent=g14336.t1;3_prime_partial=true #PROT g14336.t1 g14336 MRRMPEKDKPKVLQEASICRMLKHPNICRLDDTILTQQAFYMVFELVSGGELFDDIVRRTYYSERDASRVMRQIFSAVEHIHVKNIVHRDLKPENLLLESSRPGANLK # ORIGINAL: g10373.t1 original gene structure, not modified by PASA NODE_5826_length_705_cov_36.1302 AUGUSTUS gene 63 579 . + . ID=g10373;Name=g10373.t1 NODE_5826_length_705_cov_36.1302 AUGUSTUS mRNA 63 579 . + . ID=g10373.t1;Parent=g10373;Name=g10373.t1 NODE_5826_length_705_cov_36.1302 AUGUSTUS exon 63 205 . + . ID=g10373.t1.exon1;Parent=g10373.t1 NODE_5826_length_705_cov_36.1302 AUGUSTUS CDS 63 205 . + 2 ID=cds.g10373.t1;Parent=g10373.t1 NODE_5826_length_705_cov_36.1302 AUGUSTUS exon 459 579 . + . ID=g10373.t1.exon2;Parent=g10373.t1 NODE_5826_length_705_cov_36.1302 AUGUSTUS CDS 459 579 . + 0 ID=cds.g10373.t1;Parent=g10373.t1 #PROT g10373.t1 g10373 NGAGLAMATMDIIKLHGGKPANFLDVGGGASAQQVTEAFKIISSDTKVNAILVNIFGGIMRCDVIAQGIIAAASQLSIRIPLIVRLQ # ORIGINAL: g2931.t1 original gene structure, not modified by PASA NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS gene 92 851 . + . ID=g2931;Name=g2931.t1 NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS mRNA 92 851 . + . ID=g2931.t1;Parent=g2931;Name=g2931.t1 NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS exon 92 419 . + . ID=g2931.t1.exon1;Parent=g2931.t1 NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS CDS 92 419 . + 0 ID=cds.g2931.t1;Parent=g2931.t1 NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS exon 709 851 . + . ID=g2931.t1.exon2;Parent=g2931.t1 NODE_5331_length_903_cov_182.271_potentialcontaminant AUGUSTUS CDS 709 851 . + 2 ID=cds.g2931.t1;Parent=g2931.t1 #PROT g2931.t1 g2931 MASGSFGKIAKEWRLKTGLTTEFEEAPIDFNELSAVGRKGALEAYTEIWGKSITGGTATLRAEKAEAVKRYVDRMIKERGPASYDPLALNKSPDFVQELEKEWSDIVGVRVVVCLPWLVVVLPWLVVLPWLVVLVAMVVGLRAKVAPMSLLGVVPS* # PASA_UPDATE: g11584.t1, single gene model update, valid-1, status:[pasa:asmbl_1852,status:12],[pasa:asmbl_1853,status:12], valid-1 NODE_1520_length_10767_cov_41.8147 . gene 110 2941 . - . ID=g11584;Name=g11584.t1 NODE_1520_length_10767_cov_41.8147 . mRNA 110 2941 . - . ID=g11584.t1;Parent=g11584;Name=g11584.t1 NODE_1520_length_10767_cov_41.8147 . five_prime_UTR 2762 2941 . - . ID=g11584.t1.utr5p1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 2732 2941 . - . ID=g11584.t1.exon1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 2732 2761 . - 0 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 1985 2559 . - . ID=g11584.t1.exon2;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 1985 2559 . - 0 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 1632 1782 . - . ID=g11584.t1.exon3;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 1632 1782 . - 1 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 1182 1313 . - . ID=g11584.t1.exon4;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 1182 1313 . - 0 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 966 1060 . - . ID=g11584.t1.exon5;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 966 1060 . - 0 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 464 710 . - . ID=g11584.t1.exon6;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 464 710 . - 1 ID=cds.g11584.t1;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . exon 110 174 . - . ID=g11584.t1.exon7;Parent=g11584.t1 NODE_1520_length_10767_cov_41.8147 . CDS 110 174 . - 0 ID=cds.g11584.t1;Parent=g11584.t1;3_prime_partial=true #PROT g11584.t1 g11584 MAESVANGAVDAGTASAPSPAPDAPTAGASVVAGVSASASGAVANGAGGPSSGGAWKGERGHAGRGGYRGGNGQGSHGHAAGHYGHVQHRPPMGYGMYPMGVGMPHMYPVPMPYGARPPWGPGGHVRGQRGGAHAPRPPMPMHGGAVHPGQAQGHPHGHGDARDAQSPVASSVGISGIKTNLYIAGLPPTTTDEKLGALCTPYGEVVSAKAILDRTSGQCKGYGFVMLDSPATTAKAVAGLKVAGYIVSFAKDQNGVAPSNPPQPLQSNGQRPKAAGDSDPTNLYFSNLPRHMDETQLEAMIAPFAKPVSTRILRDSSGFARGVGFARMDAPDVCEQIIANFNGVYLPGCLDALQVRLADTPGDRRQRPSQQLHSQHNQHHRHQPQPYWGAPPGAFYQRAEGSDDARGAQIAPSSGVYDRSIDLGAHAHQG # ORIGINAL: g11586.t1 original gene structure, not modified by PASA NODE_1520_length_10767_cov_41.8147 AUGUSTUS gene 6837 7860 . - . ID=g11586;Name=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS mRNA 6837 7860 . - . ID=g11586.t1;Parent=g11586;Name=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS exon 7570 7860 . - . ID=g11586.t1.exon1;Parent=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS CDS 7570 7860 . - 0 ID=cds.g11586.t1;Parent=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS exon 7197 7363 . - . ID=g11586.t1.exon2;Parent=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS CDS 7197 7363 . - 0 ID=cds.g11586.t1;Parent=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS exon 6837 7005 . - . ID=g11586.t1.exon3;Parent=g11586.t1 NODE_1520_length_10767_cov_41.8147 AUGUSTUS CDS 6837 7005 . - 1 ID=cds.g11586.t1;Parent=g11586.t1 #PROT g11586.t1 g11586 MHMLWRIGVLFGAGVFLSVLFNLLQTQHHVTQFPPDVARILSSAWWIPVACGYATVLVGLAYPAVDAWLGQPHTFKRDWSSVMRCVGVFIGINYASAKLPFSTNVQLSCMLALMAIGLWWLFDRTIRGFALSLIVAACSTISVQLIVYFGLFRYTQPDFVGVRSWIPCVFFAAGVTFGCIGRQLAFDDDSSRKGITAALSATNKAKVD* # PASA_UPDATE: g11587.t1, single gene model update, valid-1, status:[pasa:asmbl_1854,status:12], valid-1 NODE_1520_length_10767_cov_41.8147 . gene 8368 10532 . - . ID=g11587;Name=g11587.t1 NODE_1520_length_10767_cov_41.8147 . mRNA 8368 10532 . - . ID=g11587.t1;Parent=g11587;Name=g11587.t1 NODE_1520_length_10767_cov_41.8147 . exon 10403 10532 . - . ID=g11587.t1.exon1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . CDS 10403 10532 . - 0 ID=cds.g11587.t1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . exon 10019 10218 . - . ID=g11587.t1.exon2;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . CDS 10019 10218 . - 2 ID=cds.g11587.t1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . exon 9783 9849 . - . ID=g11587.t1.exon3;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . CDS 9783 9849 . - 0 ID=cds.g11587.t1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . exon 9264 9436 . - . ID=g11587.t1.exon4;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . CDS 9264 9436 . - 2 ID=cds.g11587.t1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . exon 8368 9120 . - . ID=g11587.t1.exon5;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . CDS 8530 9120 . - 0 ID=cds.g11587.t1;Parent=g11587.t1 NODE_1520_length_10767_cov_41.8147 . three_prime_UTR 8368 8529 . - . ID=g11587.t1.utr3p1;Parent=g11587.t1 #PROT g11587.t1 g11587 MCTYMYVYEHFNYIKLSWDSPLTWWITFLAVDLGYYFFHRYAHEINILWAAHVVHHSSEDYNLTTALRQSILQSYTSWIFFLPLAVALPPSIFYTHRQFNTLYQFWIHTEIVRSLGPLEYILNTPSHHRVHHGGTLIIWDRIFGTFAAENEQVVFGLTHPQYTWDPLWTQVHHLAHIWRNFVAIKGWRNKLSVLFKGPGWQPGTARLGDPNGIPDVKAPWPKYDRALPGFLNVYVILHFMLIVLAYSIIANGDKFGIPYVMVLALGSYVLFSLTTFGAMFDHKPYAFGMELTRIAVFLALELAFWFSHGDDFVFLWYREPGADVPLYVHRPLKAIRAFYIFSAMWLMGRYALFSFYGDAEKPVTTLSQTAPLRTGAGDGAPDKKRT* # PASA_UPDATE: g11585.t1, single gene model update, valid-1, status:[pasa:asmbl_1850,status:3], valid-1 NODE_1520_length_10767_cov_41.8147 . gene 3623 6639 . + . ID=g11585;Name=g11585.t1 NODE_1520_length_10767_cov_41.8147 . mRNA 3623 6639 . + . ID=g11585.t1;Parent=g11585;Name=g11585.t1 NODE_1520_length_10767_cov_41.8147 . five_prime_UTR 3623 3661 . + . ID=g11585.t1.utr5p1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . exon 3623 3707 . + . ID=g11585.t1.exon1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . CDS 3662 3707 . + 0 ID=cds.g11585.t1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . exon 4103 4206 . + . ID=g11585.t1.exon2;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . CDS 4103 4206 . + 2 ID=cds.g11585.t1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . exon 4373 5040 . + . ID=g11585.t1.exon3;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . CDS 4373 5040 . + 0 ID=cds.g11585.t1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . exon 5218 5362 . + . ID=g11585.t1.exon4;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . CDS 5218 5362 . + 1 ID=cds.g11585.t1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . exon 5573 6639 . + . ID=g11585.t1.exon5;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . CDS 5573 6094 . + 0 ID=cds.g11585.t1;Parent=g11585.t1 NODE_1520_length_10767_cov_41.8147 . three_prime_UTR 6095 6639 . + . ID=g11585.t1.utr3p1;Parent=g11585.t1 #PROT g11585.t1 g11585 MFSRSLRAAFRPFSQVRFASTQPGRVVSVIGAVVDVQFDDALPPILNALEVEGRENRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKCVDTGAPIQIPVGPDTLGRIMNVIGEPIDERGPINSKTKLPIHAEAPPFVEMSTNAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKGPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRDIEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITTTTKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPRTVGVEHYEVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFSVAEVFTGQAGKLVPIVDTVKGFKRILQGECDHLPEAAFYMVGPIEEVFEKAERLAKSVEDKK* # ORIGINAL: g2788.t1 original gene structure, not modified by PASA NODE_7555_length_427_cov_66.2784_potentialcontaminant AUGUSTUS gene 2 427 . + . ID=g2788;Name=g2788.t1 NODE_7555_length_427_cov_66.2784_potentialcontaminant AUGUSTUS mRNA 2 427 . + . ID=g2788.t1;Parent=g2788;Name=g2788.t1 NODE_7555_length_427_cov_66.2784_potentialcontaminant AUGUSTUS exon 2 427 . + . ID=g2788.t1.exon1;Parent=g2788.t1 NODE_7555_length_427_cov_66.2784_potentialcontaminant AUGUSTUS CDS 2 427 . + 1 ID=cds.g2788.t1;Parent=g2788.t1 #PROT g2788.t1 g2788 DLDEFVRTAVVLPNIPVWAPHISRNLIRMQYEFTKRHYAGTKYETCALIEAMRTPTKTMPNGYELDHLIDLVVVKRNAWCIKTLFKFIYGNATTPNGMWCLAKEPGFALRNKKLAKAFLYYVPKKPSNKRIRTDDGSDSST # ORIGINAL: g6475.t1 original gene structure, not modified by PASA NODE_1611_length_10192_cov_43.0411 AUGUSTUS gene 116 2213 . - . ID=g6475;Name=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS mRNA 116 2213 . - . ID=g6475.t1;Parent=g6475;Name=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 1968 2213 . - . ID=g6475.t1.exon1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 1968 2213 . - 0 ID=cds.g6475.t1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 1582 1757 . - . ID=g6475.t1.exon2;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 1582 1757 . - 0 ID=cds.g6475.t1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 1222 1437 . - . ID=g6475.t1.exon3;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 1222 1437 . - 1 ID=cds.g6475.t1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 804 897 . - . ID=g6475.t1.exon4;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 804 897 . - 1 ID=cds.g6475.t1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 387 500 . - . ID=g6475.t1.exon5;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 387 500 . - 0 ID=cds.g6475.t1;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 116 217 . - . ID=g6475.t1.exon6;Parent=g6475.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 116 217 . - 0 ID=cds.g6475.t1;Parent=g6475.t1 #PROT g6475.t1 g6475 MSADGKNKPTESTLQYQDQLPRLPVPNLEETCSKYLASVRPVVNDADYEETSRVVNDFKRPGGAGERLHVKLVERAKEHRNWLEEWWENLAYLDWREPCAVNVNFCGPAEYEFWPAKAGSQVYRASVMAHHVLKFWQHLKTEAYPPGKNGKAPLCMHQYTKLFGVCRVPKRERDTIETFPEATHFLVIRKGHIFTVDALTQDGDLVSEEELERRILAIKNIADSLGASDCVGVLTAENRTVWAEAQEILHSISPKNKASLEAIHSSLFALVLDAATPANMEEVARHSLTGDATSRWFDKPLQVIVYENGLAGINGE # ORIGINAL: g6476.t1 original gene structure, not modified by PASA NODE_1611_length_10192_cov_43.0411 AUGUSTUS gene 4083 5677 . + . ID=g6476;Name=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS mRNA 4083 5677 . + . ID=g6476.t1;Parent=g6476;Name=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 4083 4260 . + . ID=g6476.t1.exon1;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 4083 4260 . + 0 ID=cds.g6476.t1;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 4503 4849 . + . ID=g6476.t1.exon2;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 4503 4849 . + 2 ID=cds.g6476.t1;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 5083 5379 . + . ID=g6476.t1.exon3;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 5083 5379 . + 0 ID=cds.g6476.t1;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 5609 5677 . + . ID=g6476.t1.exon4;Parent=g6476.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 5609 5677 . + 0 ID=cds.g6476.t1;Parent=g6476.t1 #PROT g6476.t1 g6476 MLSLSRSNWVLSAFTVLSLYCAVSDAAKAGIKDIATFVLKVDTVSDFAIESFFVFIAYTATYLMVAGIFEFTNPIKSAKRTESMKKELLMGVGAMFFNVTYAVGWIWLVEPRTRFYGYFAKHEFTFLDFAIELGAYLFWMDTFFYWSHRLLHVTKPINLWYNIHRFHHQFKEPTAFAQDAVHPLEAVVQGPLPHYLVTLFLPFHPVALAAFGFLTSIYAIAAHDGRQYDLNRHMAHHHYKNVNYGLYWGFWDFICDTRFSPENKPERFWDDKNEELAYKGSMTSILDGYAKPVKSD* # ORIGINAL: g6477.t1 original gene structure, not modified by PASA NODE_1611_length_10192_cov_43.0411 AUGUSTUS gene 6182 9903 . - . ID=g6477;Name=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS mRNA 6182 9903 . - . ID=g6477.t1;Parent=g6477;Name=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 9883 9903 . - . ID=g6477.t1.exon1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 9883 9903 . - 0 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 9472 9650 . - . ID=g6477.t1.exon2;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 9472 9650 . - 0 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 9215 9360 . - . ID=g6477.t1.exon3;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 9215 9360 . - 1 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 8987 9108 . - . ID=g6477.t1.exon4;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 8987 9108 . - 2 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 8559 8701 . - . ID=g6477.t1.exon5;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 8559 8701 . - 0 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 8299 8390 . - . ID=g6477.t1.exon6;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 8299 8390 . - 1 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 7889 7942 . - . ID=g6477.t1.exon7;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 7889 7942 . - 2 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 6894 7340 . - . ID=g6477.t1.exon8;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 6894 7340 . - 2 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 6460 6575 . - . ID=g6477.t1.exon9;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 6460 6575 . - 2 ID=cds.g6477.t1;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS exon 6182 6274 . - . ID=g6477.t1.exon10;Parent=g6477.t1 NODE_1611_length_10192_cov_43.0411 AUGUSTUS CDS 6182 6274 . - 0 ID=cds.g6477.t1;Parent=g6477.t1 #PROT g6477.t1 g6477 MSTVLAKIIVTPLTIVYYSYQCYRVSGAIGPFSILGYFVFASLINRLIMSPIVELVVRQERLEGFFRYSHARLRYNCESVAFQGGEDYERRRLDRRAREVLANQRRIVGKQFPLNVSVNLFDYFGSILSYFVLAVPVFAGNYDDLDATALSSLISKTTFMSMYLINCFSTIVDVSIDLTDAAGYAHRIGGLIEAIVEEKAALLRGTAHLSEGSDRFRLERVCYYSPSSDRPLMQGLSFEVVPGKNLLVVGPSGVIERPSSSVVFYLPQRPYATDGSLLDQVVYPKCASPATHRAQSALSLGERNGHDERGSSGEADETSPLLQHDDIDAPPFAGPASFSSLDNVDRSRVLGLLDAVGLSYLVERAGGVDGGEDWEWHGEVSPGELQRIGFARMFYHSPAFAVLDEATSAVSEDAEETLFRMCADRSITVISTGHRSTLAKFHHFVLHLGGNGEWRLEENTTFEDATNAQE* # PASA_UPDATE: g6106.t1, single gene model update, valid-1, status:[pasa:asmbl_9202,status:3], valid-1 NODE_753_length_18100_cov_39.3625 . gene 3660 9077 . - . ID=g6106;Name=g6106.t1 NODE_753_length_18100_cov_39.3625 . mRNA 3660 9077 . - . ID=g6106.t1;Parent=g6106;Name=g6106.t1 NODE_753_length_18100_cov_39.3625 . five_prime_UTR 8742 9077 . - . ID=g6106.t1.utr5p1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 7547 9077 . - . ID=g6106.t1.exon1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 7547 8741 . - 0 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 7212 7228 . - . ID=g6106.t1.exon2;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 7212 7228 . - 2 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 6710 6861 . - . ID=g6106.t1.exon3;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 6710 6861 . - 0 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 5940 6274 . - . ID=g6106.t1.exon4;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 5940 6274 . - 1 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 5347 5690 . - . ID=g6106.t1.exon5;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 5347 5690 . - 2 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 4948 5019 . - . ID=g6106.t1.exon6;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 4948 5019 . - 0 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 4590 4800 . - . ID=g6106.t1.exon7;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 4590 4800 . - 0 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . exon 3660 4413 . - . ID=g6106.t1.exon8;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . CDS 4223 4413 . - 2 ID=cds.g6106.t1;Parent=g6106.t1 NODE_753_length_18100_cov_39.3625 . three_prime_UTR 3660 4222 . - . ID=g6106.t1.utr3p1;Parent=g6106.t1 #PROT g6106.t1 g6106 MGGPANCRTPNPVGVWTTEIRPYITWWSCLIIASIVACLVVLPIVVYNTAASSEQNVLDHRFFEAATTEMRNIGVIAARTLRVLQNMRIPVRLEGDNLTFTQFHESAELLAKPESVTQILWLPLVRNADKEAFEQRIRTLNGAIEPSLANYTILEVRSNRTYFNPSLPLTLEPAENRSLYMPATYLWTSPKLIVSGTRVGVDALTHPAFSNDAFTPFLTGIAKLKTNAVISFDRRKRGLFVFTPVYSSFQKPATTAERASLAVGQLAALTGLSAMVEEARAYTASIHVYIFDETRIDSLYCEAGMPEVTSADAIPSVHRARFEGSFSVEDRNWTFVAVPTRHLVNDAITYEPEIFATVTAVGFFLLLVGAMVAIRKIVHTQANMAVSERRRRLVNEMIGYVNHEIRNPLNGIVGLVDHASETTKDCLRATTPDKESIKAIALDLRDTVSMCDLMKHIIDDVLDIRCLDEGRLKIIPAPTRLSRLLSDVAAIVQLKMTEKPSLTLTLDPFDTTAVIVCDAVRVKQMLLNFIINSIKYSESGPIVVRVAHMTDSTGERMRFSVQDGGQGIEESKKALVFKPFMQVSGGARHQGVGLGLYLCSMLAEALDGSVGFESTLGVGSTFWFDLPFVPATVTEGTDDDAISISAFSAGIVDRNGVVTVDVPENDDRLLTHDTVVSDNNEKVWDTADSMELKPMMRETMVQDAVQRQQPPATLRHLVCDDGKINRVVLKRYIQSMSPTAIVDEAENGLVAVQLATDADYDFVWMDVKMPVMGGIEATKEIRKLPRHAHTPIIGVTGDVTATEVMQYHEVGMQDVFSKPVNKAIITEAMKKYQRNRIR* # ORIGINAL: g6105.t1 original gene structure, not modified by PASA NODE_753_length_18100_cov_39.3625 AUGUSTUS gene 1461 2732 . - . ID=g6105;Name=g6105.t1 NODE_753_length_18100_cov_39.3625 AUGUSTUS mRNA 1461 2732 . - . ID=g6105.t1;Parent=g6105;Name=g6105.t1 NODE_753_length_18100_cov_39.3625 AUGUSTUS exon 1461 2732 . - . ID=g6105.t1.exon1;Parent=g6105.t1 NODE_753_length_18100_cov_39.3625 AUGUSTUS CDS 1461 2732 . - 0 ID=cds.g6105.t1;Parent=g6105.t1 #PROT g6105.t1 g6105 MEPEFAVQSVADDQVTFFSCLPMEIIDMHIASFLSAKDVVSLSHVNTALRRLLGGRHGLVLRRDLVMQYYADAEFRRQVETALPISRLHLNLQNCSVITDLSPLRGVRSVNLSGCWDIADVSALAGVHTVDLSKCKNVCDVSPLSRAHTLILRGCQSIVDVSSLGRVHILDLSGCGGVSNISALGRVHTLSLAACKLIGDVSALGTVHSLNLSGWSGSNVTALSGVHTLILASCVNLVDVSALGLVHTLSLQRSFRVCDVSALTSVHTLDLSHCSGVSDVSALGHVHTLNLSDLDILTDVSALTSVHSINISFCPQLLNLRGLENVHTAIVAGNSFSPSPVRDVSPLASAHTVNLAYAYELTGVSSLSRVHTLDLSYCVKLCDVSCLKNVHTLCLRGCASIRNSGALSIVSELTLPNGSRVVR* # PASA_UPDATE: g6107.t1, single gene model update, valid-1, status:[pasa:asmbl_9203,status:3], valid-1 NODE_753_length_18100_cov_39.3625 . gene 10706 15802 . - . ID=g6107;Name=g6107.t1 NODE_753_length_18100_cov_39.3625 . mRNA 10706 15802 . - . ID=g6107.t1;Parent=g6107;Name=g6107.t1 NODE_753_length_18100_cov_39.3625 . five_prime_UTR 15390 15802 . - . ID=g6107.t1.utr5p1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 14990 15802 . - . ID=g6107.t1.exon1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 14990 15389 . - 0 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 14026 14815 . - . ID=g6107.t1.exon2;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 14026 14815 . - 2 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 13564 13756 . - . ID=g6107.t1.exon3;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 13564 13756 . - 1 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 13094 13249 . - . ID=g6107.t1.exon4;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 13094 13249 . - 0 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 12586 12717 . - . ID=g6107.t1.exon5;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 12586 12717 . - 0 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 11680 12210 . - . ID=g6107.t1.exon6;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 11680 12210 . - 0 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . exon 10706 11407 . - . ID=g6107.t1.exon7;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . CDS 10991 11407 . - 0 ID=cds.g6107.t1;Parent=g6107.t1 NODE_753_length_18100_cov_39.3625 . three_prime_UTR 10706 10990 . - . ID=g6107.t1.utr3p1;Parent=g6107.t1 #PROT g6107.t1 g6107 MSDVPGVIVTGSPSVAGEEGNKTMLFFNHNVAPVVVVDGDQSQNESTSNPDLLSVSGSAAGNRRSASVDTEHSWEYVPVRRFGSLDKSKSGPITGPAIAARLPSAGDQPLNESGKSVSLQCLSSWDSLPERRKDDAGGVALDPTPLSRRISDDAASVTSEASISLVDFLKTEEPAHPVLKRVESDDMLGSREVETGTLKLFVQRLTSGGQSSIDQDYVWDFLLTFRYFTTPVELLQMLIHRYKSCVGIATSPSPNSTRKMSQGTIGSAAGSRRSSMQSNDDAGTSNRQAIIQLRVVNVLKKWMTLYWSDFSADRAVLLENLKEFITGTLSGNKNFSSYVDGLKALMADLDERERRERAELASLFVQVSPDTNSRRTFHLLEVNPRDIAEQLTLIEFKLFQKVSPQSLILQAWTKGASHAPALCRLIERFNEVSFWIASEVCLAGNLKQRSAVIKWAIQIAKLCREMNNFNTCLEIIAALNLSYVQRLKLTWKQVNSKSLADWRELNELMDTSKGYRNYRDILGKGLKAPILPYIGVDMKDLVLIEEGNETVRRDDGQVNFVKMKMIARVVRQIEKYQRTSYSFEEDPEVQDWLLNGITVLDDKKLQKHSLLCEPRFVEAPDQSSGNASAAQERASPSSSSAPASAASSISPSMGASLTIAAAATIAGGADAKSPNSGKRRSFSFLRKSKGDSDTPELTPSPRGSSINLIAISEDHDKDEAAKEKEKDKEDKKEKKQSPRLFRSRSKSGAQNDKVAEDDAGPVRRSSLTVPDGSAPFVQTVQTPQSPTGTIGRTKSDSTLDDGATVDLLDRYKQLLSRFSALESRNSKMEAAYQRLYLEHVSLQQKHEALQLEMNALLVWSQEGSSARVETLM* # PASA_UPDATE: g6104.t1, single gene model update, valid-1, status:[pasa:asmbl_9206,status:12], valid-1 NODE_753_length_18100_cov_39.3625 . gene 2 920 . + . ID=g6104;Name=g6104.t1 NODE_753_length_18100_cov_39.3625 . mRNA 2 920 . + . ID=g6104.t1;Parent=g6104;Name=g6104.t1 NODE_753_length_18100_cov_39.3625 . exon 2 312 . + . ID=g6104.t1.exon1;Parent=g6104.t1 NODE_753_length_18100_cov_39.3625 . CDS 2 312 . + 0 ID=cds.g6104.t1;Parent=g6104.t1;5_prime_partial=true NODE_753_length_18100_cov_39.3625 . exon 694 920 . + . ID=g6104.t1.exon2;Parent=g6104.t1 NODE_753_length_18100_cov_39.3625 . CDS 694 883 . + 1 ID=cds.g6104.t1;Parent=g6104.t1 NODE_753_length_18100_cov_39.3625 . three_prime_UTR 884 920 . + . ID=g6104.t1.utr3p1;Parent=g6104.t1 #PROT g6104.t1 g6104 QQQQQQQQQQQQQQQQQQQQQQQQHRQTPTPTTTTTTTTTTTSTVANRLGCSRSVVTRVELRERYFGALDKGPDHRYSDVWVHDARDASHTEFGCESVDSVVERSTRLVGELETTHCGDVIFLVAHGDVLQILATALLRLPPAQHRTCMKPLGTAQVWSLEEHAGL* # PASA_UPDATE: g6108.t1, single gene model update, valid-1, status:[pasa:asmbl_9207,status:12], valid-1 NODE_753_length_18100_cov_39.3625 . gene 16597 17935 . + . ID=g6108;Name=g6108.t1 NODE_753_length_18100_cov_39.3625 . mRNA 16597 17935 . + . ID=g6108.t1;Parent=g6108;Name=g6108.t1 NODE_753_length_18100_cov_39.3625 . five_prime_UTR 16597 16693 . + . ID=g6108.t1.utr5p1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . exon 16597 16838 . + . ID=g6108.t1.exon1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . CDS 16694 16838 . + 0 ID=cds.g6108.t1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . exon 16961 17094 . + . ID=g6108.t1.exon2;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . CDS 16961 17094 . + 2 ID=cds.g6108.t1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . exon 17311 17425 . + . ID=g6108.t1.exon3;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . CDS 17311 17425 . + 0 ID=cds.g6108.t1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . exon 17623 17832 . + . ID=g6108.t1.exon4;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . CDS 17623 17832 . + 2 ID=cds.g6108.t1;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . exon 17925 17935 . + . ID=g6108.t1.exon5;Parent=g6108.t1 NODE_753_length_18100_cov_39.3625 . CDS 17925 17935 . + 2 ID=cds.g6108.t1;Parent=g6108.t1 #PROT g6108.t1 g6108 MSSEDGRSDRNASTKDVWQSSLFTLLVVPMLIHMGVGAIMFVLKALKRGPKWNPVQENTWKFRVLVALIVALVMYEMKDIVMKLDPTCYDDLEVSRTATSESIRANFRKLSLVYHPDKTTGDETKFMAIRKAFEKIGDPKKRIVYDVFGNAAVDCDSCVFPAHYVIYISLGEIMSYAALALLTFLLTLGRKRTEVRSKCYLIAI* # ORIGINAL: g327.t1 original gene structure, not modified by PASA NODE_2398_length_6418_cov_44.9406 AUGUSTUS gene 1722 2821 . + . ID=g327;Name=g327.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS mRNA 1722 2821 . + . ID=g327.t1;Parent=g327;Name=g327.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS exon 1722 2680 . + . ID=g327.t1.exon1;Parent=g327.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS CDS 1722 2680 . + 0 ID=cds.g327.t1;Parent=g327.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS exon 2791 2821 . + . ID=g327.t1.exon2;Parent=g327.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS CDS 2791 2821 . + 1 ID=cds.g327.t1;Parent=g327.t1 #PROT g327.t1 g327 MTKKPGRPRGSVTPPRVSVRSRPVTTATVDALRRRLAVTSLPADGRALPDMHDGPHPAGEADSFASEPSRRLHHAVASISSPLFFSSVEEIAFRLATSHPDRFPSAGSGRLAVLVKGNRRSVECERLSVFQLLVTTAGNAEPRGLAGLAGRFSATRRFITDGSAVVDGDAAALLSPILELEPMNLGKVWAAGVGAFQPNRLVLQSSLDYSLFICAELADSGRLTSIDALVELLRRLDVPLSEQCRGFRDSAVEQLVTYRILECGAMRHVPTVLGGCFRSTLCTRRVANDATNGGRPDSMCGQCRAGVPSLLRRWRRIADSSEKAAQSAD* # PASA_UPDATE: g326.t1, single gene model update, valid-1, status:[pasa:asmbl_4215,status:3], valid-1 NODE_2398_length_6418_cov_44.9406 . gene 214 1396 . - . ID=g326;Name=g326.t1 NODE_2398_length_6418_cov_44.9406 . mRNA 214 1396 . - . ID=g326.t1;Parent=g326;Name=g326.t1 NODE_2398_length_6418_cov_44.9406 . five_prime_UTR 1313 1396 . - . ID=g326.t1.utr5p1;Parent=g326.t1 NODE_2398_length_6418_cov_44.9406 . exon 1207 1396 . - . ID=g326.t1.exon1;Parent=g326.t1 NODE_2398_length_6418_cov_44.9406 . CDS 1207 1312 . - 0 ID=cds.g326.t1;Parent=g326.t1 NODE_2398_length_6418_cov_44.9406 . exon 214 939 . - . ID=g326.t1.exon2;Parent=g326.t1 NODE_2398_length_6418_cov_44.9406 . CDS 620 939 . - 2 ID=cds.g326.t1;Parent=g326.t1 NODE_2398_length_6418_cov_44.9406 . three_prime_UTR 214 619 . - . ID=g326.t1.utr3p1;Parent=g326.t1 #PROT g326.t1 g326 MSSRPSTRSQAIDQLLRPRKAPTQHTKDGKVAKAAPITPSKPAILTASKTTAVAKSPKKVSAQKGVTVTETAAELERESQIALLKSFDLDGTFGPCIGITREARWQRAHEAGLNPPEDVRALLHAHRGDVDFDECLFRQLV* # PASA_UPDATE: g328.t1, single gene model update, valid-1, status:[pasa:asmbl_4216,status:12], valid-1 NODE_2398_length_6418_cov_44.9406 . gene 3307 5115 . - . ID=g328;Name=g328.t1 NODE_2398_length_6418_cov_44.9406 . mRNA 3307 5115 . - . ID=g328.t1;Parent=g328;Name=g328.t1 NODE_2398_length_6418_cov_44.9406 . five_prime_UTR 5091 5115 . - . ID=g328.t1.utr5p1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 4993 5115 . - . ID=g328.t1.exon1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 4993 5090 . - 0 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 4853 4896 . - . ID=g328.t1.exon2;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 4853 4896 . - 1 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 4651 4778 . - . ID=g328.t1.exon3;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 4651 4778 . - 2 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 4218 4436 . - . ID=g328.t1.exon4;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 4218 4436 . - 0 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 4051 4090 . - . ID=g328.t1.exon5;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 4051 4090 . - 0 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 3731 3831 . - . ID=g328.t1.exon6;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 3731 3831 . - 2 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . exon 3307 3527 . - . ID=g328.t1.exon7;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . CDS 3480 3527 . - 0 ID=cds.g328.t1;Parent=g328.t1 NODE_2398_length_6418_cov_44.9406 . three_prime_UTR 3307 3479 . - . ID=g328.t1.utr3p1;Parent=g328.t1 #PROT g328.t1 g328 MPFSTAEQTIYYPEHASFAAFELLQKMSKKCPKCDKAVYMAEEQIAAGKSWHKMCFTCTACNKRLDSTTLAEKNDTLYCKSCHGKNFGPKGYGYGGGAGVLSMDTPKTAPDSVKENPTGTNSYSTASRGIDTAGASAPTSGGSKFGGGDKCPRCTKTVYLAEKVVGAGASWHKTCFTCKDCNKGLDSTTLADKDGEIYCKACHAKRFGPKGYGYGGGAGTLSYTQ* # ORIGINAL: g325.t1 original gene structure, not modified by PASA NODE_2398_length_6418_cov_44.9406 AUGUSTUS gene 206 424 . + . ID=g325;Name=g325.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS mRNA 206 424 . + . ID=g325.t1;Parent=g325;Name=g325.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS exon 206 424 . + . ID=g325.t1.exon1;Parent=g325.t1 NODE_2398_length_6418_cov_44.9406 AUGUSTUS CDS 206 424 . + 0 ID=cds.g325.t1;Parent=g325.t1 #PROT g325.t1 g325 AKSYYTASAALGPRLYEPEFNMAVCAFRSGDSQGSLLHAKKALAAYPEHADSRELHARVAKDFDGTDWLCRE* # PASA_UPDATE: g7327.t1, single gene model update, valid-1, status:[pasa:asmbl_4773,status:3], valid-1 NODE_2671_length_5492_cov_40.9919 . gene 1740 4864 . + . ID=g7327;Name=g7327.t1 NODE_2671_length_5492_cov_40.9919 . mRNA 1740 4864 . + . ID=g7327.t1;Parent=g7327;Name=g7327.t1 NODE_2671_length_5492_cov_40.9919 . five_prime_UTR 1740 1960 . + . ID=g7327.t1.utr5p1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 1740 1981 . + . ID=g7327.t1.exon1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 1961 1981 . + 0 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 2150 2247 . + . ID=g7327.t1.exon2;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 2150 2247 . + 0 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 2477 2618 . + . ID=g7327.t1.exon3;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 2477 2618 . + 1 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 2791 2930 . + . ID=g7327.t1.exon4;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 2791 2930 . + 0 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 3064 3095 . + . ID=g7327.t1.exon5;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 3064 3095 . + 1 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 3639 4344 . + . ID=g7327.t1.exon6;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 3639 4344 . + 2 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . exon 4506 4864 . + . ID=g7327.t1.exon7;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . CDS 4506 4722 . + 1 ID=cds.g7327.t1;Parent=g7327.t1 NODE_2671_length_5492_cov_40.9919 . three_prime_UTR 4723 4864 . + . ID=g7327.t1.utr3p1;Parent=g7327.t1 #PROT g7327.t1 g7327 MASKKLKCFNKSCASDSNSKFLCPECRTNIYCTDACRLKDWEAVHRKNCKAIAKETKELTALLQENNRKNICKYFKVKTIDEITVDKFPSNLSLEGRNENGQAAIHIAVGTGDTEIVQLILKLGAYVDSRDRDGNTALHLATRAGNGAMARCILNFRPDINASNKRKDTAVHVAAETGNKLILVSLLGKSPDCTAANIDDMTPTQLAIVNGRIECVGLFFDQDEALRTPSLLADAIRANKPESIRFLADHGYSMALELPDGSTPMQFAEKCGHAGALKAIRDRLDALRQPATAAAQGLLASDDASGSARKSMMFTSAPAVASSATPAKTRVCEDSVVTPIFSQFQSPIAWLSSGNATRDEVFSALKAIAKASALAEEAARLAAHNAQGNEAIKGAADRVIDAIGRNSQDLKESLAWHFASADALAKRAHMARSADAAKRLAEAVKSLALGA* # PASA_UPDATE: g7326.t1, single gene model update, valid-1, status:[pasa:asmbl_4774,status:12], valid-1 NODE_2671_length_5492_cov_40.9919 . gene 117 1482 . - . ID=g7326;Name=g7326.t1 NODE_2671_length_5492_cov_40.9919 . mRNA 117 1482 . - . ID=g7326.t1;Parent=g7326;Name=g7326.t1 NODE_2671_length_5492_cov_40.9919 . five_prime_UTR 1394 1482 . - . ID=g7326.t1.utr5p1;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . exon 1331 1482 . - . ID=g7326.t1.exon1;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . CDS 1331 1393 . - 0 ID=cds.g7326.t1;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . exon 996 1109 . - . ID=g7326.t1.exon2;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . CDS 996 1109 . - 0 ID=cds.g7326.t1;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . exon 117 831 . - . ID=g7326.t1.exon3;Parent=g7326.t1 NODE_2671_length_5492_cov_40.9919 . CDS 117 831 . - 0 ID=cds.g7326.t1;Parent=g7326.t1;3_prime_partial=true #PROT g7326.t1 g7326 MASSTPSVDDAYDVLQAGLTSALANSYENLRKFETFQSEYLKLKKTLETISGSIKYDVMVPFGPLAFMPGQLVHTNEITALLGDNWFAKTSAKDAAGIVDRRIEYVCEKLEEARKEIALMEQRSSLTGDLFGGSSSFASAESVVSGSGSGSGDPGAATLKFSMRDSASPGFDGSELESDEDIVDIREEIGEEDDSSDLDGPGNERTVARASTRADVPVAVVPTPSPASTLSGQSTSKSSASSGGALVEGAGDSSILRALLDKYEAEERRLGEHDAGDEDRASAATASPLVKGKGKGK # PASA_UPDATE: g5887.t1, single gene model update, valid-1, status:[pasa:asmbl_4470,status:3], valid-1 NODE_2512_length_6042_cov_39.2633 . gene 1925 3626 . - . ID=g5887;Name=g5887.t1 NODE_2512_length_6042_cov_39.2633 . mRNA 1925 3626 . - . ID=g5887.t1;Parent=g5887;Name=g5887.t1 NODE_2512_length_6042_cov_39.2633 . five_prime_UTR 3534 3626 . - . ID=g5887.t1.utr5p1;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . exon 3146 3626 . - . ID=g5887.t1.exon1;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . CDS 3146 3533 . - 0 ID=cds.g5887.t1;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . exon 2602 2897 . - . ID=g5887.t1.exon2;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . CDS 2602 2897 . - 2 ID=cds.g5887.t1;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . exon 1925 2350 . - . ID=g5887.t1.exon3;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . CDS 2240 2350 . - 0 ID=cds.g5887.t1;Parent=g5887.t1 NODE_2512_length_6042_cov_39.2633 . three_prime_UTR 1925 2239 . - . ID=g5887.t1.utr3p1;Parent=g5887.t1 #PROT g5887.t1 g5887 MSRNDDYGAWGAAAQRGQAPAIDPMQSAQTSVTDFNNAVNQMRKFVDVLGTPKDTAVFRSQLRDQRTKATNLARSTKQIMDNKPYDLSEPNRLKWDKLSRQFIQCIKDFEDISKLSLQKERQIIARSQSISENQGHSGPSGGSGHYQQQQQQQQVSQQELHKQEQVLIDLEEQNREIRELESDLVQLHECFVDMQRLVTDQGEAIDHIERHTETAAISTGVAVQEVRQAQAYQSSARKKKIACIIVSIIAVIVAGVVIYFIVKK* # PASA_UPDATE: g5886.t1, single gene model update, valid-1, status:[pasa:asmbl_4469,status:12], valid-1 NODE_2512_length_6042_cov_39.2633 . gene 112 1624 . - . ID=g5886;Name=g5886.t1 NODE_2512_length_6042_cov_39.2633 . mRNA 112 1624 . - . ID=g5886.t1;Parent=g5886;Name=g5886.t1 NODE_2512_length_6042_cov_39.2633 . five_prime_UTR 1341 1624 . - . ID=g5886.t1.utr5p1;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . exon 1231 1624 . - . ID=g5886.t1.exon1;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . CDS 1231 1340 . - 0 ID=cds.g5886.t1;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . exon 860 941 . - . ID=g5886.t1.exon2;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . CDS 860 941 . - 1 ID=cds.g5886.t1;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . exon 523 595 . - . ID=g5886.t1.exon3;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . CDS 523 595 . - 0 ID=cds.g5886.t1;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . exon 112 191 . - . ID=g5886.t1.exon4;Parent=g5886.t1 NODE_2512_length_6042_cov_39.2633 . CDS 112 191 . - 2 ID=cds.g5886.t1;Parent=g5886.t1;3_prime_partial=true #PROT g5886.t1 g5886 MFGRLLKKSDGDAPVESMLFSTSTEDGGKSHGESLISPLPWSPPGFDRDQIRILIFQENTRFGKVPLFDTLVHDEVVKLGNADIFSADARKPLRKSKDVELLGEMVFGAVPLAFK # PASA_UPDATE: g5888.t1, single gene model update, valid-1, status:[pasa:asmbl_4472,status:12], valid-1 NODE_2512_length_6042_cov_39.2633 . gene 4716 5967 . + . ID=g5888;Name=g5888.t1 NODE_2512_length_6042_cov_39.2633 . mRNA 4716 5967 . + . ID=g5888.t1;Parent=g5888;Name=g5888.t1 NODE_2512_length_6042_cov_39.2633 . five_prime_UTR 4716 5107 . + . ID=g5888.t1.utr5p1;Parent=g5888.t1 NODE_2512_length_6042_cov_39.2633 . exon 4716 5557 . + . ID=g5888.t1.exon1;Parent=g5888.t1 NODE_2512_length_6042_cov_39.2633 . CDS 5108 5557 . + 0 ID=cds.g5888.t1;Parent=g5888.t1 NODE_2512_length_6042_cov_39.2633 . exon 5781 5967 . + . ID=g5888.t1.exon2;Parent=g5888.t1 NODE_2512_length_6042_cov_39.2633 . CDS 5781 5967 . + 0 ID=cds.g5888.t1;Parent=g5888.t1;3_prime_partial=true #PROT g5888.t1 g5888 MRTSTILATAAVIAAVCAVASSAPVSSLKWIPDENTRGMWVWDQRNLPSDTAGMDAFFTFLKAPNGRTDLRINRLYFYAGLSNVNTGNTALRNFLKRAHAQNVAVELLEGDPQWVTTASGVQTAIGVCNTVAAFNAATAGSDDDFDGVHMDIEPHVLAGWKTNAGSDGYNIDYENNFVNVYVQCKAVMASKSPATTVAADIGWWYTQTNIFG # PASA_UPDATE: g2145.t1, single gene model update, valid-1, status:[pasa:asmbl_4719,status:3], valid-1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . gene 697 3321 . - . ID=g2145;Name=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . mRNA 697 3321 . - . ID=g2145.t1;Parent=g2145;Name=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . five_prime_UTR 3174 3321 . - . ID=g2145.t1.utr5p1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 3074 3321 . - . ID=g2145.t1.exon1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 3074 3173 . - 0 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 2554 2711 . - . ID=g2145.t1.exon2;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 2554 2711 . - 2 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 2211 2407 . - . ID=g2145.t1.exon3;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 2211 2407 . - 0 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 1877 1958 . - . ID=g2145.t1.exon4;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 1877 1958 . - 1 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 1490 1594 . - . ID=g2145.t1.exon5;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 1490 1594 . - 0 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 1221 1314 . - . ID=g2145.t1.exon6;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 1221 1314 . - 0 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . exon 697 994 . - . ID=g2145.t1.exon7;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . CDS 849 994 . - 2 ID=cds.g2145.t1;Parent=g2145.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant . three_prime_UTR 697 848 . - . ID=g2145.t1.utr3p1;Parent=g2145.t1 #PROT g2145.t1 g2145 MSFDTAKMSAATTAVLNSGHKMPIVGLGTYKAKGSEVEDAIRYAVETLGLRHIDTAAFYNNEEAVGRAIKSLKVPREQLFVVTKLWIDSQGYESTREAFEVSRSKLDLDYVDLYLIHHPSASGVADSSPENAKLRAGSWAAMEDLHKEGKIKSIGVSNYEIKHLQMLLSECRVRPAVNQVEYHPLLLRTALREFCAKEGIAFEAYSSLAKNNPKLMNNATVMDVATRLGKSVAQVLLRWALQHGAIIIPKSVDRKRMADNVAVFDFALSDDDMRSLDALDSNWHCTWTSHNVY* # ORIGINAL: g2146.t1 original gene structure, not modified by PASA NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS gene 4358 5419 . - . ID=g2146;Name=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS mRNA 4358 5419 . - . ID=g2146.t1;Parent=g2146;Name=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS exon 5402 5419 . - . ID=g2146.t1.exon1;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS CDS 5402 5419 . - 0 ID=cds.g2146.t1;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS exon 5081 5255 . - . ID=g2146.t1.exon2;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS CDS 5081 5255 . - 0 ID=cds.g2146.t1;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS exon 4755 4886 . - . ID=g2146.t1.exon3;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS CDS 4755 4886 . - 2 ID=cds.g2146.t1;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS exon 4358 4581 . - . ID=g2146.t1.exon4;Parent=g2146.t1 NODE_2649_length_5553_cov_34.5951_potentialcontaminant AUGUSTUS CDS 4358 4581 . - 2 ID=cds.g2146.t1;Parent=g2146.t1 #PROT g2146.t1 g2146 MGCSHNLEAHHYCSHLSEDLRQCVIYDSDAADAHLIGIEYIISERLFKTLPEEERRLWHSHAFEVMSGTLVMPRVPSAVEKKEMESLVNTYGKAFHTWQSDRGDNLPVGPPQLMMTYTSDTQVDGDQLADRDRRLAIDTKAIRQQRADLQLRPIDTGANAFLSGTTPQVTLEATAVKKDAGH* # PASA_UPDATE: g12239.t1, single gene model update, valid-1, status:[pasa:asmbl_2148,status:12],[pasa:asmbl_2149,status:12],[pasa:asmbl_2150,status:12], valid-1 NODE_1614_length_10174_cov_39.7112 . gene 7424 9925 . - . ID=g12239;Name=g12239.t1 NODE_1614_length_10174_cov_39.7112 . mRNA 7424 9925 . - . ID=g12239.t1;Parent=g12239;Name=g12239.t1 NODE_1614_length_10174_cov_39.7112 . exon 7424 9925 . - . ID=g12239.t1.exon1;Parent=g12239.t1 NODE_1614_length_10174_cov_39.7112 . CDS 7727 9925 . - 0 ID=cds.g12239.t1;Parent=g12239.t1 NODE_1614_length_10174_cov_39.7112 . three_prime_UTR 7424 7726 . - . ID=g12239.t1.utr3p1;Parent=g12239.t1 #PROT g12239.t1 g12239 MGQAIEIHTALLPLLPASSAFSQIRFIVDEYYVGADSPPCPYADFRIWFTPYVQLWLQLASERFSAVVQKATFTDPLAPLDELRPHSMSIDKIFRCVGQNASFIDGLGWPDGKIKTNFYMKFADMISTELIGYTEWLKDKALAGGKTYDASSTSVNIHASLCAALNNVVAAFEETVQSCAGMGVDIATGATTPWSDPSASSVADVFRDGLKALDDVLEFLVRTLMGPIAPVLFEHVYWILLQKEQGSKDKKERVPPPPSELTVWDLAYVGEVESDPEDEKEALLDPGSAPQTAAVRLFDMESREPMLKLYDWTPRIGQLTDELMGIIEPLPEMDKYGKMIDPKVQEAHLAAGRANAIKSDASLFKDVFSFLDNSLGALGHVLYEDVLIHVLRAYWREIVACFAKCVTRGVPGHKRLDHAQCAVLADALHSLRLYFKADGEGLADDDLEAPGYAAAHRDLVLNGMTSPQLFFEYWKFQDRGIGGPFGSCGSIKFEVTLPPRLTAGNLRVRLISCNSLQNHENPGPISAVVTVKVLTSTGEGETKRFTAKSRSNDPELNETMEFPLQAVKPHAEDHPLLYFAVWHFGKKGLEFLGESVVQLKRYTECLYGQQQVRSLSPQYHDEAKAILRILALRTHEKESQEFVRVRMLIVVRETQGETPATEQPVHGKTHVTNGHHFKAVHFHVPTGCMHCGKLMTGIGKQGYACGSCGYVCHKKCHVLVPICASVGVVTSK* # ORIGINAL: g12238.t1 original gene structure, not modified by PASA NODE_1614_length_10174_cov_39.7112 AUGUSTUS gene 5197 6895 . + . ID=g12238;Name=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS mRNA 5197 6895 . + . ID=g12238.t1;Parent=g12238;Name=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS exon 5197 5476 . + . ID=g12238.t1.exon1;Parent=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS CDS 5197 5476 . + 0 ID=cds.g12238.t1;Parent=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS exon 5625 6337 . + . ID=g12238.t1.exon2;Parent=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS CDS 5625 6337 . + 2 ID=cds.g12238.t1;Parent=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS exon 6623 6895 . + . ID=g12238.t1.exon3;Parent=g12238.t1 NODE_1614_length_10174_cov_39.7112 AUGUSTUS CDS 6623 6895 . + 0 ID=cds.g12238.t1;Parent=g12238.t1 #PROT g12238.t1 g12238 MEGEFQSGGHHTTLLFAAGANYDGQCMADPDPAWPDEAVVKEHAGAICEGDAAEPQPHERLTDPNAFPFFRQVALDAKVVSVACGDCHTLVATADGRCFAAGQNRSGQLGITTIANPIFQLTHVQQLQGVRVTHVAAGAHHSAAVSDNGRLYTWGSNRHAALGIGKVGGLAFHPQRVKRLENERIVEVACGFGHTVARTSSGDLHSFGFNAWGQCGSAPSASTQHVVNPRLVTELRDRIVRVACGRHHTIAIDREGGVYAWGGSAGGRLGVESVASSVSTPQRVNIPNGQRALSAGCGWFHSAFLLASGEIVTTGDASEGQLSLDVEEFQRFPAHPLGFDSTALTVAAGNQHTAIVTTDNRLVLFGSGSALGINRGEVAVNRPVQVSAGLDAAGKNIVPFGRVLAVACGGSHTVVVASGIE* # PASA_UPDATE: g12237.t1, single gene model update, valid-1, status:[pasa:asmbl_2147,status:12], valid-1 NODE_1614_length_10174_cov_39.7112 . gene 344 4383 . + . ID=g12237;Name=g12237.t1 NODE_1614_length_10174_cov_39.7112 . mRNA 344 4383 . + . ID=g12237.t1;Parent=g12237;Name=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 344 463 . + . ID=g12237.t1.exon1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 344 463 . + 0 ID=cds.g12237.t1;Parent=g12237.t1;5_prime_partial=true NODE_1614_length_10174_cov_39.7112 . exon 851 1055 . + . ID=g12237.t1.exon2;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 851 1055 . + 0 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 1600 1771 . + . ID=g12237.t1.exon3;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 1600 1771 . + 2 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 2317 3036 . + . ID=g12237.t1.exon4;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 2317 3036 . + 1 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 3279 3411 . + . ID=g12237.t1.exon5;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 3279 3411 . + 1 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 3601 3716 . + . ID=g12237.t1.exon6;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 3601 3716 . + 0 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . exon 3988 4383 . + . ID=g12237.t1.exon7;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . CDS 3988 4264 . + 1 ID=cds.g12237.t1;Parent=g12237.t1 NODE_1614_length_10174_cov_39.7112 . three_prime_UTR 4265 4383 . + . ID=g12237.t1.utr3p1;Parent=g12237.t1 #PROT g12237.t1 g12237 NDVVPKSDAGFILVNSMINVVAALRTTGFFDGQSQLTVTQAANKTSTIIDQLLSADNLVSLKASGASSSIAAITDGLGFAIAASNSSCPVRASEAEITTARVHIVPIRAPASDPSGTYSFTDANGLTQEFVVPTAVKDKLNPGASCAISSFSVFTTNPFAPTTPQEVRSHVMSMSVENANVTGLAEPVVFKLSLLDGNAAMDPTALAHLKCAWWSSKTGMFRTEGCTATFRSASSVTCACDHLTSFAVLFDVSGDSLSSTEENVLSVMTYVGCSISIAGCVITIATFLVLPRLRTGPSILVMNLCLALVAVNIIFMAGIDRTGDAGGCKAVAILLHFFLVAAFSWMALIGVNVWQNVVKVSIGSSFSEVTWKTFVVGWGFPVLLVGSTVIADAGLHGGVEYGNDNRCWISDRGSLIGAFVVPVGIIILANVVIFALAARSLIKAARQRSELSGTVRDLKKEVVIFLSLLLILGGTWIFAYLAMFAKAFWYPFVILNSLQGAFICVAYTMRTRVYNAWREKVEEVTGLTSSNMASTSSYSSGGKKSKGSNFVSLHERKLGSSMEDDLSRVEMVNLDLRNGV* # PASA_UPDATE: g4672.t1, single gene model update, valid-1, status:[pasa:asmbl_3330,status:12], valid-1 NODE_2037_length_7992_cov_39.4836 . gene 21 727 . + . ID=g4672;Name=g4672.t1 NODE_2037_length_7992_cov_39.4836 . mRNA 21 727 . + . ID=g4672.t1;Parent=g4672;Name=g4672.t1 NODE_2037_length_7992_cov_39.4836 . exon 21 727 . + . ID=g4672.t1.exon1;Parent=g4672.t1 NODE_2037_length_7992_cov_39.4836 . CDS 21 620 . + 0 ID=cds.g4672.t1;Parent=g4672.t1;5_prime_partial=true NODE_2037_length_7992_cov_39.4836 . three_prime_UTR 621 727 . + . ID=g4672.t1.utr3p1;Parent=g4672.t1 #PROT g4672.t1 g4672 RCDTMNHRHRMAQYASRESSRIHALLFFRQNEIDEEGYVFGVKKNAILIFVPKFGIESPVFIDNSAAKSSDAGARDHGLVFDGDKDCLRSADGKPVVSIFDRVVVRLRVDDSDVQHARLTMQLVQPFIEGLSVRVDGLDSVVPAPMHVDAPETEVHGGSEGAGAAAGVRKGAAKAPRKDGDKEGTTDGQPPSKKQKKRA* # ORIGINAL: g4673.t1 original gene structure, not modified by PASA NODE_2037_length_7992_cov_39.4836 AUGUSTUS gene 970 2958 . - . ID=g4673;Name=g4673.t1 NODE_2037_length_7992_cov_39.4836 AUGUSTUS mRNA 970 2958 . - . ID=g4673.t1;Parent=g4673;Name=g4673.t1 NODE_2037_length_7992_cov_39.4836 AUGUSTUS exon 970 2958 . - . ID=g4673.t1.exon1;Parent=g4673.t1 NODE_2037_length_7992_cov_39.4836 AUGUSTUS CDS 970 2958 . - 0 ID=cds.g4673.t1;Parent=g4673.t1 #PROT g4673.t1 g4673 MAPPHNLGRLFRVLYGLILASALWVVVYLAFLDADDIAGARLKTFSRTGNAALSAHNEIAIVGRRVDRGERDNILNIDYAASHDDTHSASTAAEENPAVGDHGNVLQHGTATAEHRNSFTEVDSENDPPSQSSAAAATSTAPPPTAPPPTAPNFTAAAVSASVAMPRPVVAVTTGSGVASGAGGHDQRAMGAGSLNGTQSGQSGRESADLTTNVTSDTVTVARLAARSGTAARDAATRDTKATHTHHSRSASALPGTSPWRPQKDASAPLLFSIDAPAVPRGGVEWDETLLVYTHVFGDDNTVFVMVQGPLAIAAVKECGFVADTDSPSVSDAHARDAFHPLPIVQFVLSRVYAPRSQYVGAVQCRAAPETHPSFSAALRYTLKLANGTVLPTTAQRRVFSRRTPSLHRLHDVCAVTQVKNRAVDLPDWLMYHRRIGVEHFVVLDNNSSDSLRAMDLGADVEVVSWPWRRSQPSGVFYMRRLAIERCRWVAFFDSDEYIFPIVAPHLHNILHAVETHNSSVGALHLRSKLMGSDGHVRRPTIPPPLAYTHHGPDPWEPMPKTILRPDVSADELAVHDLKARRPYDTRAVPDSSIFMMHYKVKSWQDYMRKYESRATSLDWKLPKEFTVDNPTPLWRKLDSLYSVVSFTQFRDFYLNVTSTVA* # PASA_UPDATE: g4674.t1, single gene model update, valid-1, status:[pasa:asmbl_3332,status:12], valid-1 NODE_2037_length_7992_cov_39.4836 . gene 4375 7810 . - . ID=g4674;Name=g4674.t1 NODE_2037_length_7992_cov_39.4836 . mRNA 4375 7810 . - . ID=g4674.t1;Parent=g4674;Name=g4674.t1 NODE_2037_length_7992_cov_39.4836 . five_prime_UTR 7762 7810 . - . ID=g4674.t1.utr5p1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 7705 7810 . - . ID=g4674.t1.exon1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 7705 7761 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 6984 7427 . - . ID=g4674.t1.exon2;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 6984 7427 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 6274 6411 . - . ID=g4674.t1.exon3;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 6274 6411 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 5880 6014 . - . ID=g4674.t1.exon4;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 5880 6014 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 5398 5621 . - . ID=g4674.t1.exon5;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 5398 5621 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 5023 5143 . - . ID=g4674.t1.exon6;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 5023 5143 . - 1 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . exon 4375 4639 . - . ID=g4674.t1.exon7;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . CDS 4508 4639 . - 0 ID=cds.g4674.t1;Parent=g4674.t1 NODE_2037_length_7992_cov_39.4836 . three_prime_UTR 4375 4507 . - . ID=g4674.t1.utr3p1;Parent=g4674.t1 #PROT g4674.t1 g4674 MRSSDVEAMVRRERDNEKQRWETIVAQWQTKHAELEAEFREALVVEADRRAQLQQALSDAEDAVSDIAQREQESREGEKRAVEVVRDMTEMVKQQKARIQELVASREDAIAVAREEVARAQNEIDDLKRWKDECAAAKRAEAEFRSKYAASESHLRRLQQERDLWSKELATQGASLSRDRGMLEAKVASLTDELGRCKHECAKWKEAATVKAKIVDDQSDTIRKLKADAADMKAVHADRVYELEQRLDEEVASSKALQEALEASESSLVDIKKASDARDADVERLQSSVESKERALQAVEHEVVELRGLFVAKEKRVVDDANKQVALISEELRRVKGELAGLQKTVLNATGERDEAIAAAHRFKRDLSDARKQVRQTEDEMRQLLLEVERRERSADERIGKFTTAISEMQRNLLAQ* # ORIGINAL: g7110.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 25627 26187 . + . ID=g7110;Name=g7110.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 25627 26187 . + . ID=g7110.t1;Parent=g7110;Name=g7110.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 25627 26187 . + . ID=g7110.t1.exon1;Parent=g7110.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 25627 26187 . + 0 ID=cds.g7110.t1;Parent=g7110.t1 #PROT g7110.t1 g7110 MVAGVDGGSIVMFGGRTQSGVFFNDVWLLYGKLEGSPLPGKAPPSWFSIWMLHGIFMSLGWGVCLQAGAFVARYFRHRDPWWFKIHRGLQVTGLILAVVGFAMGIKSVLNSHFQFAHGAIGLVVMVLHMLVMLCVPPDIDSFPMRVTPCVWLNILADDIALSVPVFDCLPSDCVLESMGTERKTLI* # ORIGINAL: g7105.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 7557 8387 . - . ID=g7105;Name=g7105.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 7557 8387 . - . ID=g7105.t1;Parent=g7105;Name=g7105.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 7557 8387 . - . ID=g7105.t1.exon1;Parent=g7105.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 7557 8387 . - 0 ID=cds.g7105.t1;Parent=g7105.t1 #PROT g7105.t1 g7105 MALALDVKLCDAETKTPLSVVNGLFIAHPGKKFEVHATCNTHPTSHGCTDYFASINVDGCQEVNHLMTVRIECKGYFADAFLYPFTFGFPSYAEPDDAPTEAAIASVGNIRVQLFRAAMCDPPYNAVKREPSGMAPPSLRPPNVVTATVPGTKKGAGRLVSTVPGEPVPFGTQAVRAVRFGPALADVTVRYSTAEALRADGVLDPINNAGHRIHFPGRQWGPAPVPAPRQSRERRPRPDDGEDDDTTVRIDLTFDDVAIVSADRKPKRPNVSIALE* # PASA_UPDATE: g7109.t1, single gene model update, valid-1, status:[pasa:asmbl_1780,status:3], valid-1 NODE_149_length_34638_cov_47.7762 . gene 18670 24419 . - . ID=g7109;Name=g7109.t1 NODE_149_length_34638_cov_47.7762 . mRNA 18670 24419 . - . ID=g7109.t1;Parent=g7109;Name=g7109.t1 NODE_149_length_34638_cov_47.7762 . five_prime_UTR 24132 24419 . - . ID=g7109.t1.utr5p1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 23907 24419 . - . ID=g7109.t1.exon1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 23907 24131 . - 0 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 23528 23640 . - . ID=g7109.t1.exon2;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 23528 23640 . - 0 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 22871 23209 . - . ID=g7109.t1.exon3;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 22871 23209 . - 1 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 21335 22701 . - . ID=g7109.t1.exon4;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 21335 22701 . - 1 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 20644 21195 . - . ID=g7109.t1.exon5;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 20644 21195 . - 2 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 19716 20374 . - . ID=g7109.t1.exon6;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 19716 20374 . - 2 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 19220 19426 . - . ID=g7109.t1.exon7;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 19220 19426 . - 0 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . exon 18670 19028 . - . ID=g7109.t1.exon8;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . CDS 18903 19028 . - 0 ID=cds.g7109.t1;Parent=g7109.t1 NODE_149_length_34638_cov_47.7762 . three_prime_UTR 18670 18902 . - . ID=g7109.t1.utr3p1;Parent=g7109.t1 #PROT g7109.t1 g7109 MAYYDANMADEEDIITQEDCWTIISSYFEEKGLVRQQLDSFDEFVNNTIQDIMDETPELELVAESQHNKANAQTPQRYLIKFQQIHLTKPTVVEGEGGQQSLTPNEARLRNLTYASTMFVDILKTTITPSLSENEEPLRETLLHEREFFGRVPIMLRSKHCKLMDEAITNDNSLTDLKECPYDQGGYFIINGSEKVLIAQEKMSNNNVYVFQKKQPSKYSFVSEIRSTLETGTRPASTLYVKMLNHRAKGGTGRVIEVTLPYIRMDIPIVVVFRALGFVADRDILEHIIYDFRDNEMMELLKPSLEDAFVIQEETIALDFIGKRGTTVGVTRDKRIRYAKEILQKEMLPHVGIGDNCETRKAYFVGYMAHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAGLFRVLFRKLTKDLRAQLQKSVDRNKEFNLPRAFNARTITDGLRYSLATGNWGDQAKAHETRAGVSQVLNRLTFASTLSHLRRLNSPVGREGKLAKPRQLHNTQWGMMCPAETPEGQACGLVKNLALMVYITVGSHSSPLLDALEEWGTENLDDISAPATIVSATKVFVNGAWVGIHNNGEELASYLRSIRREADISSEVSIVRDIREKELRLYTDAGRCCRPLFVVERQRLLLRKNDVEHLKHSMLLRETGDARFGWSQLLQTGAVELVSTEEEETSMIAMTPEDLADARSQGDKAYCTTYTHCEIHPSMILGVCASIVPFPDHNQSPRNTYQSAMGKQAMGIYISNYQFRMDTMAHVLFYPQKPLAATRSMEYLHFRELPAGINAVVAIACYSGYNQEDSVILNRSSIDRGFMRSTFYRSYRDEERRRLGQEEEFEKPTRDYVSGMRHGSYDKLDDDGLIAPGTRVSGDDAIIGKTTTLPTEENELEGRVKRFRKRDSTTFLRHSENGIVDQVMITKNQEGNSFCKVRVRAVRIPQIGDKFASRHGQKGTCGITYRQEDMPFTAEGITPDIIINPHAIPSRMTIGHLIECLQSKVATMSGKVGDASPFNSDVTVEKVSDALKNFGYHLRGNEVMYNGHTGRKINTQIFMGPTYYQRLKHMVDDKIHARARGPLTMLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAQFLRERLFEQSDAYRVHVCDLCGLVCIANVNKSLFTCKGCQNTTQISQVWIPYACKLLFQELMSMSIAPRMMVFPPKRREPGLQPL* # ORIGINAL: g7112.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 31456 32025 . - . ID=g7112;Name=g7112.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 31456 32025 . - . ID=g7112.t1;Parent=g7112;Name=g7112.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 31456 32025 . - . ID=g7112.t1.exon1;Parent=g7112.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 31456 32025 . - 0 ID=cds.g7112.t1;Parent=g7112.t1 #PROT g7112.t1 g7112 MPLWRHTAVHRARRTPVLPSGAVHCANRSAPADRAVAQRLSYKGLVPQEGDVSCATVSEKHFCKLATLTNEETLESISAQVRSDGLIGTSERSLEHQIRTSLPSVQQLKKHAKKGLFVYTMDVFFPLLDDHILTRVLEKCTEQLWGDAYTSTVRVLAWHLGDGAYQVVFSWAPLQVGTTARVVPRLEHH* # ORIGINAL: g7108.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 14793 18566 . + . ID=g7108;Name=g7108.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 14793 18566 . + . ID=g7108.t1;Parent=g7108;Name=g7108.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 14793 18263 . + . ID=g7108.t1.exon1;Parent=g7108.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 14793 18263 . + 0 ID=cds.g7108.t1;Parent=g7108.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 18375 18566 . + . ID=g7108.t1.exon2;Parent=g7108.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 18375 18566 . + 0 ID=cds.g7108.t1;Parent=g7108.t1 #PROT g7108.t1 g7108 MMAAMADDEWVEAEIRRQLEALEAQELTAKLMSKHIASTTQLAGGEQLGGVSATGDIASDGDDDDDEYDDIDSDKTREVWAKRLDYPRRAVTSADGVAIEDVDDAAVEESEPVRRLMEAHRITETVLEQRERTLLNEDADEGDDGAAATASRDDRRASIAAATSVTDMYRAAVCEMANELDVDATAAAAPVMEEMRRESEQVRTEMKGSGGMGAQGGLVAMDAEGVRVFQQIAAERERRRREIEAEIANESKRSQLALEETDRAMQAQSVDAHQRLDEKMRRQSVQFERERRVQVARLELLAANSARSAAARDRSDSLNCRDAAKEALVAARALLSAEEWDVARAVTDEMDAVDGYKNVAAELASYTARLPEVREERARMEEALTRTTHECDALRRMCDERDAMAVAARASRDALLGDLRAVDADVVAMAARIDVSNKELVDSKRRLATAEAELVQRQCAFEIAVSNAADELRAVAEEARLARQREADRLQREREEVERRKAEVERLKREEEGRLKKEAEERLRKEEEARLNREAEERRKRDAEEFQKREAEERRRQSEEEERRKRAEEERRRHSEEEERRKREEDERRRQSEEEERRKRAEEERRKREGDDESRKRLEEERRSQTEFEGHLVREDGEQRRRVEADDIRKREAEERRRKFEEEEARIQQEEDRLRKLEADELRIREEEEQDRRSRLATDERSKQEAEAASGSSTQLRLREDERRPTEPEAQAHPAQRLRESIHAVVGPDASRRPPLPPGHTQRPIDRTSAAVRIQACFRGYSLRKRLLSVLQSARYVDDDGFDYGEVDLATLDFADDDTDARFNALSPPMQPPAMYPQQFAAANSYPPGGPTRSWAGAPNAVPYDARGPVPPGMTYPQPPRPPYPVARPQVHAGGQPYADPASGAGWAPYYPPPPPQIYPYPYPHQGPPPVPRSYYDQRPPHQQAQTQAHAQAHLHGAGARPLVHPGTGQVHPSAPGYNSLYEFYDLRRPRGDEDDTQLPQQPAPQPPFRGAGMDSVHTPRRPLHDTYDDGGDDESCSPDNASSRAPPSESGESVRSRDHDITYEWGFKEDSAAAQAFLKRTHKLRKMKQGAARRKKHADPGQRLSVFRRLSENQPTAPTAPPPKKPSGRPMDIEDGHVPYRVSLPKIESPTSRGLQRAWQAPSPQGSTTGMTPPAVGRGSRPDSTASLGPDEQSTTEKVRFPPLRQGSGQNLVGQRHYM* # ORIGINAL: g7113.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 32165 32938 . + . ID=g7113;Name=g7113.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 32165 32938 . + . ID=g7113.t1;Parent=g7113;Name=g7113.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 32165 32938 . + . ID=g7113.t1.exon1;Parent=g7113.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 32165 32938 . + 0 ID=cds.g7113.t1;Parent=g7113.t1 #PROT g7113.t1 g7113 MPARKFSRMEEWMLTACKQFGLQRPTGYMAVVMYRKANSKTLTTAVACIWLAGKYNEDGSRRNLDMMSSGEICHAFAKGRVSPRDIQEEETRLLKLFEYDINKFYTAVLAAFRRKSHTRVIVAEWVEGKRDPSKRPLHPEFYETTSNDFAMELLGLAKKGLLASAVPVVLARSLAHPFEKDIDYASFAVLVPEAGTTTGVDRLTSLIRSIKLAHIEDKQANIAAAVRALSYNEVALPGDAVYRIAHELRKMKHHKHY* # ORIGINAL: g7111.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 30543 31346 . - . ID=g7111;Name=g7111.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 30543 31346 . - . ID=g7111.t1;Parent=g7111;Name=g7111.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 30543 31346 . - . ID=g7111.t1.exon1;Parent=g7111.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 30543 31346 . - 0 ID=cds.g7111.t1;Parent=g7111.t1 #PROT g7111.t1 g7111 MIRSNLGTRRSLFGDDFTVTSNPYYVTATLQAPYRITSGTLVPIPSVTRQIFFVDPAINIVVDRILDGYKVGMEVILINASQTHTIRFPAANVNCNLGTGDADRVLAYLDCMYLVYCGSGASKAWLEIIGGPNYARFVNTGLGIGSNNLSAQGVGSRVVGLSTFDMNSASEMATDTHQWLFVGYGAGEDAAVDPEDESALDARTFVGYNAGKGLQVPNTLILGSQNNPGHSADAPVAFGYNAAFADADVAIGTLSVCRTLAVRQSPD* # ORIGINAL: g7114.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 33609 34310 . - . ID=g7114;Name=g7114.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 33609 34310 . - . ID=g7114.t1;Parent=g7114;Name=g7114.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 33609 34310 . - . ID=g7114.t1.exon1;Parent=g7114.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 33609 34310 . - 0 ID=cds.g7114.t1;Parent=g7114.t1 #PROT g7114.t1 g7114 MDFTETGELCRSYTQKVLHHEVRATGSLGVFRRGNTAVSDICDEWLAAYPDAPLNTIVVVNGYVYEELLLTSDPASMKRLRSGLTDSCAARAFMLRWLNARIAAITSLSSYSTLAGEPTSNASTVAAFPTDVRCAGVAGYFPATEASTVCLAVYCGSCYADGASPYGVCVCGWWNVAPNRMADELLHVRSHSAGDATPRKYAVHEKVDATGQHMQQFPAVYSLRRVWKSRGTK* # ORIGINAL: g7106.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 10931 11602 . - . ID=g7106;Name=g7106.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 10931 11602 . - . ID=g7106.t1;Parent=g7106;Name=g7106.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 10931 11602 . - . ID=g7106.t1.exon1;Parent=g7106.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 10931 11602 . - 0 ID=cds.g7106.t1;Parent=g7106.t1 #PROT g7106.t1 g7106 MYLALRYPQLVDRLTEPGSLTRCSSLVTGGIGRCVHTYVQSLAGGQMPKPRYGKLKPDTTYHDSSNKFFLAVQFMKLNGEVLDRLLSSDAPCLCPEDVDVSLDDLTRYLSAVCKESNATRLIEDWIDGGLLYRRSRISRIRSSHQFTRPIDALVYFKGVSSKDATALSLMFEMVLGSGSINAGTLMEAILRPHLANFPPFAAAFGKYSPSTIHQQESPLYRRR* # ORIGINAL: g7104.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 1396 6996 . + . ID=g7104;Name=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 1396 6996 . + . ID=g7104.t1;Parent=g7104;Name=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 1396 1552 . + . ID=g7104.t1.exon1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 1396 1552 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 2151 2215 . + . ID=g7104.t1.exon2;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 2151 2215 . + 2 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 2381 2452 . + . ID=g7104.t1.exon3;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 2381 2452 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 2686 2786 . + . ID=g7104.t1.exon4;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 2686 2786 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 3130 3781 . + . ID=g7104.t1.exon5;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 3130 3781 . + 1 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 3956 3996 . + . ID=g7104.t1.exon6;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 3956 3996 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 4170 4239 . + . ID=g7104.t1.exon7;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 4170 4239 . + 1 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 4567 4707 . + . ID=g7104.t1.exon8;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 4567 4707 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 4867 4996 . + . ID=g7104.t1.exon9;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 4867 4996 . + 0 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 5226 6273 . + . ID=g7104.t1.exon10;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 5226 6273 . + 2 ID=cds.g7104.t1;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 6543 6996 . + . ID=g7104.t1.exon11;Parent=g7104.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 6543 6996 . + 1 ID=cds.g7104.t1;Parent=g7104.t1 #PROT g7104.t1 g7104 MASSRIRSSDADDSVDADHGFDPRRGDEGDEEGLLMGELGRESVSVKSDADEAGDTVASFPWSTIRLPKNIVPKQYDLVLFPDLDDLVFSGNVNITVEVRIPTRHVVMHSLGLNVTSVVVSGGASSSLAIERTFSELSNQFLVISMRDALSTGTFVVRIAFAAPLTEELAGLYLSTYTDHATNTTRRIAATQFEPTDARRAFPCFDEPGFKAVFRVAAVIREGFHAISNMPDVQKVALPGKPECIGCAHVPTAAEGTRDLQDARASGEGVFYEVRFSDSVPMSTYLVALVVCDFDHVVPAENSTPTPVRVWGPRGRAHQLVLAANITGRIIASYERTFGVKYALPKLDLVAIPDFAAGAMENWGLITYRESALMYSPEESSSADEQWVCLVVAHELSHQWFGNLVTMEFWDDLWLNEGFAARMEYLGVDAVFPEWRMDDMFLPLTLQRALKTDATNASHPIHVKVENPSEINEIFDDISYEKGASVLRMLASTLGSDTFYGGIRSYVRDHSYGNAETDNLWDALTAATNGTVDVRAFMDTWVRQKGYPLVTVSRHNTTFVRIAQSPFSIGGMASSGLPQTRWAVPLTYATDAGTVDAVTILHGQDILVPIPMDCRWFKLNVGHTGFYRVNYDPMERGCGGWSALAVAFAASTSAVPSPSLALASSDSNGPHNAFLTTDRAGLLDDAFELARAGVVPQRIALELTRYLGDETEYVPWRTALTELSRVGALMQWGDTYAEFVRHVRGIVGAAMDRVGWDTPASHTQRLLQSALAAAAVSHGYRPAMLRATALFRDLLDGNGAYISPDLRDAVYVAGVATGGLDEWEFVWSLYAATDVPSERMRCLRALASTRLPWLLNRLLSDCLDPSRIRTQDAFIVVGLVAASGIGQQLAWDFVRSRWDFLIENYGEGMAIPRIISYVCDGFATPMRLAEFETFFGPRDLRAGRRAVASSREKIGENIEWLRLYQKDVLSWLAEGR* # ORIGINAL: g7107.t1 original gene structure, not modified by PASA NODE_149_length_34638_cov_47.7762 AUGUSTUS gene 12048 13885 . + . ID=g7107;Name=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS mRNA 12048 13885 . + . ID=g7107.t1;Parent=g7107;Name=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 12048 12215 . + . ID=g7107.t1.exon1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 12048 12215 . + 0 ID=cds.g7107.t1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 12386 12447 . + . ID=g7107.t1.exon2;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 12386 12447 . + 0 ID=cds.g7107.t1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 12621 12738 . + . ID=g7107.t1.exon3;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 12621 12738 . + 1 ID=cds.g7107.t1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 13092 13175 . + . ID=g7107.t1.exon4;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 13092 13175 . + 0 ID=cds.g7107.t1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 13492 13585 . + . ID=g7107.t1.exon5;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 13492 13585 . + 0 ID=cds.g7107.t1;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS exon 13839 13885 . + . ID=g7107.t1.exon6;Parent=g7107.t1 NODE_149_length_34638_cov_47.7762 AUGUSTUS CDS 13839 13885 . + 2 ID=cds.g7107.t1;Parent=g7107.t1 #PROT g7107.t1 g7107 MASPSANNVAWATTTPGSIAGLSSSTREVAESAFELLHSAIVDYVVSSTPETAGKKEEIYFKLERLGFRVGQSLLERQTRDVPRFRDQLEAIKFICKDLWIVLFRKQIDNLRTNYRGVYVLHDNKFRMLAQMSKGSQFVDLASPYLAFTCGLVRGGLANLGISSVVTAEVTTMPACTFQIKVYTGDQAAS* # PASA_UPDATE: g7103.t1, single gene model update, valid-1, status:[pasa:asmbl_1779,status:12], valid-1 NODE_149_length_34638_cov_47.7762 . gene 48 1041 . - . ID=g7103;Name=g7103.t1 NODE_149_length_34638_cov_47.7762 . mRNA 48 1041 . - . ID=g7103.t1;Parent=g7103;Name=g7103.t1 NODE_149_length_34638_cov_47.7762 . five_prime_UTR 858 1041 . - . ID=g7103.t1.utr5p1;Parent=g7103.t1 NODE_149_length_34638_cov_47.7762 . exon 451 1041 . - . ID=g7103.t1.exon1;Parent=g7103.t1 NODE_149_length_34638_cov_47.7762 . CDS 451 857 . - 0 ID=cds.g7103.t1;Parent=g7103.t1 NODE_149_length_34638_cov_47.7762 . exon 48 143 . - . ID=g7103.t1.exon2;Parent=g7103.t1 NODE_149_length_34638_cov_47.7762 . CDS 48 143 . - 1 ID=cds.g7103.t1;Parent=g7103.t1;3_prime_partial=true #PROT g7103.t1 g7103 MERKRKVAAALGEDAAAMGPATPWPMGPSGSTADIFQPAMHMMDPHRAHPLAQHPSHIYEGMGMYMHPLVPAMQPSLPHSFQQHPGHSIVAGLPVHPYPSRTYPVSAQPGQYVGSSSGDDSIAAATIEDDMREPTRDSMREYLNAPQDKTVVIFNSRVAQKSYGNEK # ORIGINAL: g2340.t1 original gene structure, not modified by PASA NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS gene 8817 9098 . + . ID=g2340;Name=g2340.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS mRNA 8817 9098 . + . ID=g2340.t1;Parent=g2340;Name=g2340.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 8817 9098 . + . ID=g2340.t1.exon1;Parent=g2340.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 8817 9098 . + 0 ID=cds.g2340.t1;Parent=g2340.t1 #PROT g2340.t1 g2340 MGRFKHEIVSTVKAALRTTCKSANLILGIPKLPSCESDQISADAYALLNAHVRRCLEGATLTLSDKTFEQTQLRHLFLLVSASSAPKQPPHGR* # ORIGINAL: g2338.t1 original gene structure, not modified by PASA NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS gene 1362 3267 . - . ID=g2338;Name=g2338.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS mRNA 1362 3267 . - . ID=g2338.t1;Parent=g2338;Name=g2338.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 2407 3267 . - . ID=g2338.t1.exon1;Parent=g2338.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 2407 3267 . - 0 ID=cds.g2338.t1;Parent=g2338.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 1362 2075 . - . ID=g2338.t1.exon2;Parent=g2338.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 1362 2075 . - 0 ID=cds.g2338.t1;Parent=g2338.t1 #PROT g2338.t1 g2338 MATARRQIWLLHAVILMTCAFISILLYSLSATSGSARLGGEGQQSVAGRHLADEAAIVDDALLPLRRAETDDPVLPLRRAETDDPVLPLRRAQTDDAGCPWRSRVYVYPFPDELTIDALRLARTINVDPYCKPTTCIHSQFALEQLLHDYLLNSCARVDDPAKADYFFIPLYATIFMRLETASTPTTLQHEATNCVVAALHGSTECWKTVLGMDDQWLRRHGGRDHIIVQAHPPIFKREFFSYEFVWKTNATFVVIETERSKFLAAPESARSRVIVAPYPVLSPAFVDPQGAFHNQYFRPLVAVFVAGMRGPPGVRAAVESAMLRMPSFTLGQLGDGNPMITTRHLNETFETFIRPIRWDLHSFYAVLCPAPVGDTPSTRRLFNALLSGCAPIVISDELVLPWQTPQGQHGDDKLLNWDALLAARVPEASLLGFEKPRFKGPSKLATLVGMDDRKDISANGTVTNAAARARIVEMARVRESFIYRLPVLNNIIGGEQWEQWDVKNLGAFARVWMSIGLNVKPTT* # PASA_UPDATE: g2343.t1, single gene model update, valid-1, status:[pasa:asmbl_8369,status:12], valid-1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . gene 16531 20281 . - . ID=g2343;Name=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . mRNA 16531 20281 . - . ID=g2343.t1;Parent=g2343;Name=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 20206 20281 . - . ID=g2343.t1.exon1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 20206 20281 . - 0 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 19210 20042 . - . ID=g2343.t1.exon2;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 19210 20042 . - 2 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 18740 18948 . - . ID=g2343.t1.exon3;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 18740 18948 . - 0 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 18081 18480 . - . ID=g2343.t1.exon4;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 18081 18480 . - 1 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 17450 17886 . - . ID=g2343.t1.exon5;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 17450 17886 . - 0 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 17091 17262 . - . ID=g2343.t1.exon6;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 17091 17262 . - 1 ID=cds.g2343.t1;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 16531 16917 . - . ID=g2343.t1.exon7;Parent=g2343.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 16531 16917 . - 0 ID=cds.g2343.t1;Parent=g2343.t1 #PROT g2343.t1 g2343 MVPAVSIVVNGGPNTAKTVLAAVRNGCPIIVMKNSGRFADILAKEYESKFPQIMPTQAPTDQQSSTVRHNKHTLGIRSPFHNSKSVSSPNGNGSTPSQSFVPPETPRRFDLFQRSSRVGPETPARSGNADITSVTGAAAATTQPKAQLDSPPVHVLAWAEQDFLAVQVRTTTGGLLPNPNQKVVMTYTPDPLPVVNTIANNSNSGEYGTVSANNRLPPITMGQSNPQPITAIANIKAPDGVARFGALRCSLCGAWKAADEREVNRASAPDAKSKCPEPTCKSDKMAKVVGVGPYIAKNATYFRVEYNEFFVTNRMTAHEIVHMQDDAPMLMELQLKGELQAALAEIVSEGTITTQDLAAQELKVQALQNFIVSAIQLSDQRINSDRSFGGAAIEQEQLRLAWERFALYDLHAEKLKVNHTRALFMSYVLTIGMTALSVLYGYLEACDGRVPNWVSDMIYTLVLVFALLAGVTTAAQHRFNFGEKWIMLRASSEQVLRDIYVYRTGQARNRNGKRGQQSLWLSRQLARIANQLKDSEVTETAIYSTINDDNSKDKEPRGLLQKMQGRGDAVRTIGIEGDDVGGEQGHSNDGPGSGAGGNGKNGWTSHDVVQVEDEYVDPSRIVFMRGTEAVDPETRPWVLRQLRQRLDHAELVARYNGIVPDMYVKYRLELALNHYAKKTPHNVHVIKILHGFIYTLSAAGAFLAAMKQAWWIPITACVGTILLSYLDTSQIQFSVVRANRAAMELDNVRLWWRSLSPVEKASPENIASLVATTESIMDATVGSWFAQMHAAQEKLKEAKDSVEEERKRKRKKGQDSNEEGEEEENEDDFYPADDDIF* # PASA_UPDATE: g2342.t1, single gene model update, valid-1, status:[pasa:asmbl_8371,status:12], valid-1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . gene 14841 15963 . + . ID=g2342;Name=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . mRNA 14841 15963 . + . ID=g2342.t1;Parent=g2342;Name=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . five_prime_UTR 14841 14904 . + . ID=g2342.t1.utr5p1;Parent=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 14841 15502 . + . ID=g2342.t1.exon1;Parent=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . CDS 14905 15327 . + 0 ID=cds.g2342.t1;Parent=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . exon 15774 15963 . + . ID=g2342.t1.exon2;Parent=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . three_prime_UTR 15328 15502 . + . ID=g2342.t1.utr3p1;Parent=g2342.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant . three_prime_UTR 15774 15963 . + . ID=g2342.t1.utr3p2;Parent=g2342.t1 #PROT g2342.t1 g2342 MLRLCICRSAAPIARVHSAAAHAIRHCSSSTEPPSLNTTSSHKDVTADRIAHLASLAKLRVDDGDAIRDIAAMIHLLDGLHSVDTDGVRPMNSVVEDIVDLHLRNDVPADPTTCDERSSAIMAVAPEKFESFYAVPRVQE* # ORIGINAL: g2339.t1 original gene structure, not modified by PASA NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS gene 4462 7878 . + . ID=g2339;Name=g2339.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS mRNA 4462 7878 . + . ID=g2339.t1;Parent=g2339;Name=g2339.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 4462 7878 . + . ID=g2339.t1.exon1;Parent=g2339.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 4462 7878 . + 0 ID=cds.g2339.t1;Parent=g2339.t1 #PROT g2339.t1 g2339 MRRAAFFHTVGTLATCASFATVSASLTQVVKALEPVFTMILAYILHRSAVPPMQTLAAMLISLGIAVACAGDGTAISTGVMAAVVSALCFPARNVLSAGVRTQLSPTEKYAAISALSFGWSLAPLAFKLIFFNSIFLGGIRDRLTTIFVAAISHISYNSASYFLLDHTSPITHSIANICKRFSTVISSHIYFLLPYTGIEAVGLAITAAGFALYTAVKFGLGRRSLADSVKSSRWGLVKAIAACFVGALILSALVRNSGTLLPGSSVEQSSSKPYERKAEAPRLGLILWPEAGSPFSETDSPLEAHISLFDEVIVMCALRDSCQRSLLSTGLSQDTRLRIRIDALVGVTMCEGTALENWFEQHVLNKLIVGEAYPVHVMTAVRLCAVHRFGGSIIDPHSAANPCAAVHPPWSVCVGLNSKAAVLDVRVLAAGSPNSPQVLAMIDAFVKAFPVIRSVTAWPHDVRYGKALATAFMDACSPSRRKSNDTSADLLQFEGIQKGLSSCVVVKVPPIETTLASGRAFVVLSGAPSSSNPAVNLGDTIQTLPGLQFLPYVTGFIERDLHASGDGKWRDRGATMLTDVKWGVSVDTWPPPPSIQPIPISIYVDRPPFDKLLSTRDSLAWFRAHTPIGAGNSQTLQYLLSLGIPAYFSGSATMLLGTSRRRNPPARDVIYIVDVGHRIVNMLPIEIVEKAVILSHEVRINTTVHVASDKLASFVEAFDRIQRYQRARLVITQSMDAALSCVAMETPVIYINDLSPTDGVSNGRNSTSPETFANQLSIFHSLDLTDDAHTFFSTFNYNNPPPNPNVGQRDRQRAVLWNSIRSDEDLRAAGMFNGVVPLRRLPSHQDSVDDSRTFFHIVRAPFGAHARSWGVVQQRALESIFFHHPDVRVVIHVLGDVLQSSVFSSLAEVGYNITIRSVDVAALMAQASSQGVEMSQRFADSLRAPSDFSQHAQSYAALRLLIAFSESGVHVDSGVIFTKRIGRLRYLQSSVFKSESHAGLNGALFVVDRPGSPLAREGLAVFSAANMNSNLFTGGMSDVLSHVLEQRGSFGAGMYVTPALALRAFDLRRKEDACYEKRDSTSFMRFVAATGREMPMAVVLHGVTEVLPSSMHGTLCEHLLTRFCIMCNEQPLRPLKF* # ORIGINAL: g2337.t1 original gene structure, not modified by PASA NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS gene 240 1105 . + . ID=g2337;Name=g2337.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS mRNA 240 1105 . + . ID=g2337.t1;Parent=g2337;Name=g2337.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 240 407 . + . ID=g2337.t1.exon1;Parent=g2337.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 240 407 . + 2 ID=cds.g2337.t1;Parent=g2337.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 1050 1105 . + . ID=g2337.t1.exon2;Parent=g2337.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 1050 1105 . + 2 ID=cds.g2337.t1;Parent=g2337.t1 #PROT g2337.t1 g2337 NSLANRHLDGLLPATWRSAGKSVITMSATFWNFGVTIDIIHMKRGTAKPTPRVLQCPHWLRTARLAVTAVLAS* # ORIGINAL: g2341.t1 original gene structure, not modified by PASA NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS gene 11461 14025 . + . ID=g2341;Name=g2341.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS mRNA 11461 14025 . + . ID=g2341.t1;Parent=g2341;Name=g2341.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS exon 11461 14025 . + . ID=g2341.t1.exon1;Parent=g2341.t1 NODE_593_length_20499_cov_42.9089_potentialcontaminant AUGUSTUS CDS 11461 14025 . + 0 ID=cds.g2341.t1;Parent=g2341.t1 #PROT g2341.t1 g2341 MGDAAGVALIVWAHSGTPLDADDEPSLNLVRILSTGEYKMIKIFCADPVACTSASGRLAQEIPNARVSVFPLVAGEICSGTPLEIWFRRQTMNKLLVGPAYHGYVLQALHLCATYRYGGVIADGNSPAAELGAQQDDMEEREACVAISKNGDLHTNTMAAARNSAVIKSLMLAFADGFPTYSPGTAWPVPFPSASILGSTFNDACVADACHVWALPAESAPIASNALSASTDESYAVLAYDSRLRNPRTEINVGDEVQAIPGAQFLPYISHFLDRGRHYLTPPLTGMANDSRVTIFMNAWWGSSLWPPPSYLQPILVSMHANTDMYAAFRSNASKSYFNAYGLPIGARDPTTQALFTAAGIPTYFSACATLLMASARTLNYQSSREKIYLVDVSASVLPLLPAWVIAESVHVEHNLDPTVGPVKTDRLFRYNKAFEYLAMYRDARLVITQRIHAGLPSVAMETPVLFINGQNMPGGGGSARKASARVAGLTQLFHTIDLFAVTEAEARNAFDEFNYRDPPPNPSPEIRDRFRATLWGVIRENKALRAEALLNGIVPLRRIDMGDRPQLQFHFIQTTHTGAILGKGRVAVWSYRQQRSLESVFFHHPNARATIHTDTLPPDAVAKFVEAGYDIRIEALNVESLALGTPLEGITSLARYTTWEQGPFWYSHHTDMLRLLILYNTGGIYLDTDVVVTKSFDDLRNTVAYQNVGGLINGAVMVFDARSPFLFDCMREFNETYDGSKWSVNGPDLITRVYRRLWRFRPDVVNALEPSSFYMFDYRKIGICFSETNATIIQEYVGLLKARTPFAVHLNNRITGPRGDFLPGTICEYLLSAFCLFCNELPLRPLAYSIFAF* # PASA_UPDATE: g13492.t1, single gene model update, valid-1, status:[pasa:asmbl_5131,status:12], valid-1 NODE_285_length_28005_cov_42.226 . gene 117 1550 . - . ID=g13492;Name=g13492.t1 NODE_285_length_28005_cov_42.226 . mRNA 117 1550 . - . ID=g13492.t1;Parent=g13492;Name=g13492.t1 NODE_285_length_28005_cov_42.226 . five_prime_UTR 1412 1550 . - . ID=g13492.t1.utr5p1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . exon 1259 1550 . - . ID=g13492.t1.exon1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . CDS 1259 1411 . - 0 ID=cds.g13492.t1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . exon 1012 1155 . - . ID=g13492.t1.exon2;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . CDS 1012 1155 . - 0 ID=cds.g13492.t1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . exon 810 924 . - . ID=g13492.t1.exon3;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . CDS 810 924 . - 0 ID=cds.g13492.t1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . exon 557 653 . - . ID=g13492.t1.exon4;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . CDS 557 653 . - 2 ID=cds.g13492.t1;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . exon 117 421 . - . ID=g13492.t1.exon5;Parent=g13492.t1 NODE_285_length_28005_cov_42.226 . CDS 117 421 . - 1 ID=cds.g13492.t1;Parent=g13492.t1;3_prime_partial=true #PROT g13492.t1 g13492 MVLVACHCLNVKVHVQGESLRSYPSAPGLNAADTFFDAVDLCELGLRGITTEQPRLIKVRTVASLKIVSCLNCKSDVYARECDAGGVESSRAYVRLDALVGLDEIAKAKNSERFSPIYNIVLEYGANEPAEADVDVAGSGADMTKTVAELQEHVMGQLAKYKGAMDERIRAFVNREQEAYDQLQRRAHRDKDVFFRTIARLHREAFLADITDALSDALGDNNSDKNSDGPAVGGAVHCLPSLPPPHPSSRTQSAAVESHIPSSLGRPDFGS # PASA_UPDATE: g13494.t1, single gene model update, valid-1, status:[pasa:asmbl_5132,status:12], valid-1 NODE_285_length_28005_cov_42.226 . gene 6516 10801 . - . ID=g13494;Name=g13494.t1 NODE_285_length_28005_cov_42.226 . mRNA 6516 10801 . - . ID=g13494.t1;Parent=g13494;Name=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 10521 10801 . - . ID=g13494.t1.exon1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 10521 10801 . - 0 ID=cds.g13494.t1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 10382 10443 . - . ID=g13494.t1.exon2;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 10382 10443 . - 1 ID=cds.g13494.t1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 9903 10296 . - . ID=g13494.t1.exon3;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 9903 10296 . - 2 ID=cds.g13494.t1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 7107 9784 . - . ID=g13494.t1.exon4;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 7107 9784 . - 1 ID=cds.g13494.t1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 6648 6964 . - . ID=g13494.t1.exon5;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 6648 6964 . - 2 ID=cds.g13494.t1;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . exon 6516 6554 . - . ID=g13494.t1.exon6;Parent=g13494.t1 NODE_285_length_28005_cov_42.226 . CDS 6516 6554 . - 0 ID=cds.g13494.t1;Parent=g13494.t1 #PROT g13494.t1 g13494 MGPATRHGRSQGAPTATTPGAACDSRKLRNSLHGVSDAPASPSQRTRRSGRLKVDGREELVDQVGDGGGGGGGRYEEDEEDAGAHARHRPYAIRHASAGAHGANGVSPTVPKTESNDASDVRDESDVAGLRRSARPRKARYETLNLTRLEHLAVEAAGQPGNRSDNGGSSPEEDDEASHSDSPGLPPRRRRRRSSRLTADADRDDAESDEEEEEPPGPDEYEEILIEPLRAGLRPRRVFRLKSDIRMADEHAEDHGEEHADGEQRTYHLRERRRQVERYEPQEPKPSRDTHHRMAHGSRPSGERRHHHGHAGHGHRHHGRSAAAKSSRSDRRHLTRFNSSSTECSDSDSEGAFERRRGRSVIAGRAGLMPINVSEKDVDKFARRRAAAGGSSLADIDPMAIQSDVAFDAIGGLQKHVMALREMVVLPLLYPEVFERFRVAPPRGILFSGPPGTGKTLVARALANECSRGDRKVAFFMRKGADCLSKWVGESERQLRLLFDQAYMMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGATNRVDAIDPALRRPGRFDREFLFPLPHRNARRDILRIHTRGWTPSLPPSFLDSVADMCIGYCGADLKALCTEAALAALRRQYPQIYSSDRKLLLDVSTLSVCQGDFAKAMQQIVPTAQRGAVSCGSPLAPHMEALLGGFVDAVAQSALSLLPRAALRGLGEASGTSTLPTPDGVSSGDDDDLDSMGHPYIARRDTAHHRLLILGTQNNATASTVAPAVLHRLEHIPVISIDYVALVSDAAARSPEEALGAAFREARRVAPSVVYMPNASSWWNVASESLRSCLRLLLDALPPATPILLLATADGSDLPEEVAEFFPVASLRHVVPRPSSGARRAFFADVFAACLEAPPAGRYVALADGSIRRRPRPAPPVLPFAPAAAKALTRAELDSIRAKEDVVFRELRIFLRSIVGRLMDNRRFRCFCKPVDPAEVPDYHEIVRTPMDLSTLLRQVDDRRYESVASFLGDVDLIVENAVLYNPLSDKDAVVARAHALRDMAHSMAEAGDDIVEACAEIERARVLRAQLEGKPTAAPDVHRDPNATRFSLRLRGEHAPDAEDDSADGPGNPRKRQRTDMPAAGETVVDGKHETMPATTTETRAPCDSLGTAQSGPAECAVAGPADAGVPAPAAAASDDLATTEPVFIGCPPGFDDFVNTLVERTANVSICAMDRLHADFWKLTKAPQHLFDRVALLEALRHKLREFTDS* # ORIGINAL: g13495.t1 original gene structure, not modified by PASA NODE_285_length_28005_cov_42.226 AUGUSTUS gene 11657 17153 . - . ID=g13495;Name=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS mRNA 11657 17153 . - . ID=g13495.t1;Parent=g13495;Name=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 17085 17153 . - . ID=g13495.t1.exon1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 17085 17153 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 16861 16962 . - . ID=g13495.t1.exon2;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 16861 16962 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 16341 16721 . - . ID=g13495.t1.exon3;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 16341 16721 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 16031 16138 . - . ID=g13495.t1.exon4;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 16031 16138 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 15782 15913 . - . ID=g13495.t1.exon5;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 15782 15913 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 14460 15653 . - . ID=g13495.t1.exon6;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 14460 15653 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 13944 14298 . - . ID=g13495.t1.exon7;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 13944 14298 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 13609 13721 . - . ID=g13495.t1.exon8;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 13609 13721 . - 2 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 13371 13482 . - . ID=g13495.t1.exon9;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 13371 13482 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 13090 13172 . - . ID=g13495.t1.exon10;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 13090 13172 . - 2 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 12878 12970 . - . ID=g13495.t1.exon11;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 12878 12970 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 12414 12633 . - . ID=g13495.t1.exon12;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 12414 12633 . - 0 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 12010 12229 . - . ID=g13495.t1.exon13;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 12010 12229 . - 2 ID=cds.g13495.t1;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 11657 11891 . - . ID=g13495.t1.exon14;Parent=g13495.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 11657 11891 . - 1 ID=cds.g13495.t1;Parent=g13495.t1 #PROT g13495.t1 g13495 MEFDSAWSSFEGTIIDLMHDNNEVRNHAEEVFKNASSQPNVLLPLLVHGMQRSGEPHVRKMTAVTFRRIAAQTVGDDSVWTLMSPDAQQSCKVGLLQAIRAEQNAEVARKVCDCVSRVFRLMDLAWIELLPFMFDCCKSPSPIEREVALRLFEAAPDMFGDSLDRYAVTVKEMLYRTLGDAEVKVRVASTKATVAFLLLAEVEKYWGPLRLVDLLDVVFKNVSHLVTIGEDGFILQILENVVELAQRPLFFKGILDSTVQAMGTIIMLKNDAITEQTRYIALELLVSIAEYANQSKYGFVRKSASFAPAVIPLCLQLMTLLDDDLDAWTNSTDEDEESDEGAFVGEQALDRLACALGGRVLLPVAFSVIPAMLQSQRWEERHAGLMAISAIGEGCNTQMRNELSKIVDLVVPFLQDSNPRVRYATCNAIGQMATDFGGIFQKTYHMNIAPALLHAMADSNPRVQAHGAAAVVNFCENARPDHVTPYLQPILAQLYTMLQSHWQIVKEQTITTIATVADRVGRAFADYYDTFVPVLTSFLEHARAADQRLLRGKAMECISLIGLAVGKEKFAPAAVRVMDILKDTSLLDNDDPQLSYMLSAWTRICKILGADFIPYLPMVIPPLLQTAKLEPDCEIVNDSVPGNAPERTEREGWESIRLEEDTRVFIKTSVLEEKNTACEMIVCFARELKGGFAQYVPDTLNVMVPLLKFYFHEDIRPVLFCFPHCCCALELSMNGVERWRTYCCACVFLDHPPAFSRARVREAAAMSLPYLLQAAIEGGLSPDFIAAQWNVIVSDMSAIIEAEEDLEIISEFLDSMSQCIEIFDQPCLSSEQQLKLAQIIDNELNNYSERANKRLNFSDEDYDDQAKDVTDLEDDADNNTLRAIADFMHALFLSHKTLFLPTFEHLLPKFAAMLDPARPKADHQWALCVFDDLIEYTGPESFRYSSFFLGNLSGYALQDDAEVRQAAVYGLGVAAMHGGQAYGEMLRHMLPQLIAIASDPKARTDEWITATENVVSAIGKICKYVQGTEEALPSFISLLPVTMDEEEATHVYTYVCELIESNNVYALGKSNERLPIIVKAFAGVLGTDLIKPELELRISNILRQIESGAPQELKNACYAMLSEKEVAHLQAVFANPPQ* # PASA_UPDATE: g13499.t1, single gene model update, valid-1, status:[pasa:asmbl_5134,status:12],[pasa:asmbl_5136,status:12], valid-1 NODE_285_length_28005_cov_42.226 . gene 25505 27837 . - . ID=g13499;Name=g13499.t1 NODE_285_length_28005_cov_42.226 . mRNA 25505 27837 . - . ID=g13499.t1;Parent=g13499;Name=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 27700 27837 . - . ID=g13499.t1.exon1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 27700 27837 . - 0 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 27373 27508 . - . ID=g13499.t1.exon2;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 27373 27508 . - 0 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 27015 27221 . - . ID=g13499.t1.exon3;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 27015 27221 . - 2 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 26546 26833 . - . ID=g13499.t1.exon4;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 26546 26833 . - 2 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 26250 26385 . - . ID=g13499.t1.exon5;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 26250 26385 . - 2 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 25850 25967 . - . ID=g13499.t1.exon6;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 25850 25967 . - 1 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . exon 25505 25729 . - . ID=g13499.t1.exon7;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . CDS 25589 25729 . - 0 ID=cds.g13499.t1;Parent=g13499.t1 NODE_285_length_28005_cov_42.226 . three_prime_UTR 25505 25588 . - . ID=g13499.t1.utr3p1;Parent=g13499.t1 #PROT g13499.t1 g13499 MCRALTVMFDCLKLYGASFRSQWWRDLFLIIFRIFDDLKLPEQQNEKTEWMNTTCNNALYAIVDVFTMYYETLQPILLSDVFDRLLWSVQQDNEQLARSGVHCLQILVLGNGTKFTTEVWDMSVQYVRKLFDKTVPHGLMTYGQHGANGHDDDHAPRGRKDNTADFHSIIIKCVVQLELIQAVQHMVLGAPDAEGVEGETPGVPAASNPLLPSREGMYGLLSDGHVLLFLDCLRDAHDFARAFNANLELRTSLWKAGFMKQMPNLLKQETTSLVCAFRILFRVYDDDRRKGMWSEVERRIFEVSDKVFSYFSTLQSDKQREIWTPLLTLLLKETLKLPEDRFSRHIGAIYAYLCDILVFELRPEVRAALRDVFKRVGSQYNVVGPVS* # PASA_UPDATE: g13496.t1, single gene model update, valid-1, status:[pasa:asmbl_5135,status:3], valid-1 NODE_285_length_28005_cov_42.226 . gene 18596 20425 . + . ID=g13496;Name=g13496.t1 NODE_285_length_28005_cov_42.226 . mRNA 18596 20425 . + . ID=g13496.t1;Parent=g13496;Name=g13496.t1 NODE_285_length_28005_cov_42.226 . five_prime_UTR 18596 18679 . + . ID=g13496.t1.utr5p1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . exon 18596 18745 . + . ID=g13496.t1.exon1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . CDS 18680 18745 . + 0 ID=cds.g13496.t1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . exon 18891 19190 . + . ID=g13496.t1.exon2;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . CDS 18891 19190 . + 0 ID=cds.g13496.t1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . exon 19322 19846 . + . ID=g13496.t1.exon3;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . CDS 19322 19846 . + 0 ID=cds.g13496.t1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . exon 19960 20163 . + . ID=g13496.t1.exon4;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . CDS 19960 20163 . + 0 ID=cds.g13496.t1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . exon 20262 20425 . + . ID=g13496.t1.exon5;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . CDS 20262 20366 . + 0 ID=cds.g13496.t1;Parent=g13496.t1 NODE_285_length_28005_cov_42.226 . three_prime_UTR 20367 20425 . + . ID=g13496.t1.utr3p1;Parent=g13496.t1 #PROT g13496.t1 g13496 MAILTASDLAGFSQYKYSSKDTSPLSNYIMHPFWDAFVKILPRWLAPNLMTFSGFLLLLLNFMLLCVFDWDFRVAFDEDPFLVPSWVWFTCGISHFLSHTLDGADGKQARRTGSSTPLGELMDHGCDSMAAWLMFLSLLSPLGVADNPWQLFWILNGVMLAFYCTHWEKYITGVLFLPWAYDLSQIIITVVFIVSGFYGTHLWTFRLDFLPYEPTIIQLFKITTAGGIALQQLQSLYNIYVSPIRRWGLRDSMTPLVALALHYASFAAWVLISRADVLHNHTRMLYTAMGLVFSAMTCGLIVSQMTGRKHNPFDLNDPSSWLLCVMPFVVFSLWAFRASPATEVAVLHGLVAGATVVWTLYFFGVVSDICKHLRIYLFSITSRPTSSKLAVSAKKRLVN* # PASA_UPDATE: g13498.t1, single gene model update, valid-1, status:[pasa:asmbl_5133,status:3], valid-1 NODE_285_length_28005_cov_42.226 . gene 22705 24865 . - . ID=g13498;Name=g13498.t1 NODE_285_length_28005_cov_42.226 . mRNA 22705 24865 . - . ID=g13498.t1;Parent=g13498;Name=g13498.t1 NODE_285_length_28005_cov_42.226 . five_prime_UTR 24771 24865 . - . ID=g13498.t1.utr5p1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . five_prime_UTR 24566 24589 . - . ID=g13498.t1.utr5p2;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 24771 24865 . - . ID=g13498.t1.exon1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 24487 24589 . - . ID=g13498.t1.exon2;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 24487 24565 . - 0 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 24208 24246 . - . ID=g13498.t1.exon3;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 24208 24246 . - 2 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 23889 23995 . - . ID=g13498.t1.exon4;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 23889 23995 . - 2 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 23468 23660 . - . ID=g13498.t1.exon5;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 23468 23660 . - 0 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 23007 23269 . - . ID=g13498.t1.exon6;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 23007 23269 . - 2 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . exon 22705 22912 . - . ID=g13498.t1.exon7;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . CDS 22874 22912 . - 0 ID=cds.g13498.t1;Parent=g13498.t1 NODE_285_length_28005_cov_42.226 . three_prime_UTR 22705 22873 . - . ID=g13498.t1.utr3p1;Parent=g13498.t1 #PROT g13498.t1 g13498 MSRHDLLSWVNNTLQLNYQKVEQLASAAAYCQLCDVLWPGVAPLKRVKFDAKLEHEYIANFKVLQDILAKKGIDKTIPVDKLVKAKFQDNFEFLQWFKKFFDQHYGGQEYDPVERRGGGSAGVTRAPATASSPKSGIVKAPTRKVAPTRSTGGSGSNGNISGGAPRASAGGDANARVTELKLTVDGLEKERDFYFNKLRDIEVICQQHESDHSPALQSILKILYATEEGFEIPQEDETF* # ORIGINAL: g13497.t1 original gene structure, not modified by PASA NODE_285_length_28005_cov_42.226 AUGUSTUS gene 20620 22155 . - . ID=g13497;Name=g13497.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS mRNA 20620 22155 . - . ID=g13497.t1;Parent=g13497;Name=g13497.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 21576 22155 . - . ID=g13497.t1.exon1;Parent=g13497.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 21576 22155 . - 0 ID=cds.g13497.t1;Parent=g13497.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 20620 21434 . - . ID=g13497.t1.exon2;Parent=g13497.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 20620 21434 . - 2 ID=cds.g13497.t1;Parent=g13497.t1 #PROT g13497.t1 g13497 MTGSMATNGDQRTAWPENVGIIAMEVYFPATCVNQTKLEEFDGAGAGKYTIGLGQTNMAFCTDREDINSICLTAVQSLVEKFNISYADIGRLEVGTETIIDKSKSVKTVLMQLFTESGNTDVEGVQTTNACYGGTAALFNTLAWVESSAWDGRYGLVVAADIAVYAEGNARPTGGAGAVAMLVGPNAPLVIERGLRASHMEHVYDFYKPKLESEYPEVDGKLSIECYFRALDKSYERYGAKAAQRSKGGVRFDVSQSDYYVFHSPFNKLVQKSFGRLLFNDFLRDPQAPQFAGVPEHLRAARLENTYGDREVEQVFVRLSDQLYNERVIPSTLLSKQLGNMYTASLYGGLASLLVTQTPAQLAGKRAILFSYGSGLASSMFSVRFAEQAEVAPLCERMEDVRTRLESRRYVDPREFESTMQLRDETHNLANYTPVGSVEALFPGTWYLEKVDAKYRRAYSCKAK* # ORIGINAL: g13493.t1 original gene structure, not modified by PASA NODE_285_length_28005_cov_42.226 AUGUSTUS gene 3585 6302 . + . ID=g13493;Name=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS mRNA 3585 6302 . + . ID=g13493.t1;Parent=g13493;Name=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 3585 3622 . + . ID=g13493.t1.exon1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 3585 3622 . + 0 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 3713 3847 . + . ID=g13493.t1.exon2;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 3713 3847 . + 1 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 3936 4110 . + . ID=g13493.t1.exon3;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 3936 4110 . + 1 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 4208 4721 . + . ID=g13493.t1.exon4;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 4208 4721 . + 0 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 4825 4943 . + . ID=g13493.t1.exon5;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 4825 4943 . + 2 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 5148 5263 . + . ID=g13493.t1.exon6;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 5148 5263 . + 0 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 5528 5710 . + . ID=g13493.t1.exon7;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 5528 5710 . + 1 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 5881 5954 . + . ID=g13493.t1.exon8;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 5881 5954 . + 1 ID=cds.g13493.t1;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS exon 6097 6302 . + . ID=g13493.t1.exon9;Parent=g13493.t1 NODE_285_length_28005_cov_42.226 AUGUSTUS CDS 6097 6302 . + 2 ID=cds.g13493.t1;Parent=g13493.t1 #PROT g13493.t1 g13493 MEYHQMAQTQQVILCCQCGVAIPPNSANMCVDCIRNSIDITDGIPKQAIIHYCRGCDRYLQPPTHWVQCQLESRELLTICLKKMKGLGKVRLIDAGFIWTEPHSRRIKVKLTIQKEVFADTILQQVFVVEFVVQNQQCENCQRRMANDNWKAVVQVRQKVDHKKTFYFLEQLILKHRAHEKTINIKERPDGLDFYYSSKTDAAKMLDFFQAVVPLRYKKSERMISHDIHSNTFNTKFTFSVELVPICKDDLVCLPPKLARAQGNIAQLCLCYRVGNSVHLIDPNTLQVTEISSAKYWQFEFRSLSSQKQLVEYTVLDMDLLGPTRGKYALADVQLARSRDLGVNDTTFYSRTHLGYLIKPGDTVMGFDMAYMNVNDEHANNLQRESMPDVILVKKVFPRIKRKRVWRVKQLNKEPEGYSKREEEVAALDFENFLQDLEEDKDLRSAINIYKDPTADEVTLAAQAVRAAETGMDVGLEELLEDLRLDDAHAPPDTLPTLPPAAVAGDGAAGDDGDQMVID* # PASA_UPDATE: g5409.t1, single gene model update, valid-1, status:[pasa:asmbl_4191,status:3], valid-1 NODE_2388_length_6456_cov_40.0969 . gene 2260 5452 . - . ID=g5409;Name=g5409.t1 NODE_2388_length_6456_cov_40.0969 . mRNA 2260 5452 . - . ID=g5409.t1;Parent=g5409;Name=g5409.t1 NODE_2388_length_6456_cov_40.0969 . five_prime_UTR 5236 5452 . - . ID=g5409.t1.utr5p1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 5081 5452 . - . ID=g5409.t1.exon1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 5081 5235 . - 0 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 4593 4678 . - . ID=g5409.t1.exon2;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 4593 4678 . - 1 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 4167 4323 . - . ID=g5409.t1.exon3;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 4167 4323 . - 2 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 3749 3831 . - . ID=g5409.t1.exon4;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 3749 3831 . - 1 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 3313 3390 . - . ID=g5409.t1.exon5;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 3313 3390 . - 2 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . exon 2260 2960 . - . ID=g5409.t1.exon6;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . CDS 2803 2960 . - 2 ID=cds.g5409.t1;Parent=g5409.t1 NODE_2388_length_6456_cov_40.0969 . three_prime_UTR 2260 2802 . - . ID=g5409.t1.utr3p1;Parent=g5409.t1 #PROT g5409.t1 g5409 MQEEEFEIALKVLIVGNGGIGKSSLIQRYCKGIFTKDYKKTIGVDFLEKQLDHDGENVRLMLWDTAGQEEFDAITKAYYKDAHACVLAFSTTDRDSFEAVEKWKKKVEAECGKIPMVLIQNKIDLIDQAVMEPNEAEGLAKRIGVRFYRISVKDNLKVDDVFEYLVTTYLKNKHTATSEPISSKKIGMFQAEDGASSKDDSSHEKKPSSSSNGDFQIQKPNKQRTKGKKSATQKCLLQ* # PASA_UPDATE: g5408.t1, single gene model update, valid-1, status:[pasa:asmbl_4192,status:12], valid-1 NODE_2388_length_6456_cov_40.0969 . gene 114 1575 . + . ID=g5408;Name=g5408.t1 NODE_2388_length_6456_cov_40.0969 . mRNA 114 1575 . + . ID=g5408.t1;Parent=g5408;Name=g5408.t1 NODE_2388_length_6456_cov_40.0969 . five_prime_UTR 114 115 . + . ID=g5408.t1.utr5p1;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . exon 114 275 . + . ID=g5408.t1.exon1;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . CDS 116 275 . + 0 ID=cds.g5408.t1;Parent=g5408.t1;5_prime_partial=true NODE_2388_length_6456_cov_40.0969 . exon 505 647 . + . ID=g5408.t1.exon2;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . CDS 505 647 . + 2 ID=cds.g5408.t1;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . exon 778 898 . + . ID=g5408.t1.exon3;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . CDS 778 898 . + 0 ID=cds.g5408.t1;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . exon 1198 1575 . + . ID=g5408.t1.exon4;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . CDS 1198 1310 . + 2 ID=cds.g5408.t1;Parent=g5408.t1 NODE_2388_length_6456_cov_40.0969 . three_prime_UTR 1311 1575 . + . ID=g5408.t1.utr3p1;Parent=g5408.t1 #PROT g5408.t1 g5408 VCFDAKINFDDNAAFRQKAIFEQRDTAEEDPREVAASNFNLNYVGMEGNIGCLVNGAGLAMATMDIIKLYGGAPANFLDVGGSVKEDQVAEAFKIITSDKQVKALLVNIFGGIVNCATIANGIVSACKEIGLSLPLIVRLEGTNVDNAKRIIAESGLNIISADNLDDAAKKAVAALKK* # PASA_UPDATE: g1962.t1, single gene model update, valid-1, status:[pasa:asmbl_220,status:12], valid-1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . gene 42 14288 . + . ID=g1962;Name=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . mRNA 42 14288 . + . ID=g1962.t1;Parent=g1962;Name=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 42 1442 . + . ID=g1962.t1.exon1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 42 1442 . + 0 ID=cds.g1962.t1;Parent=g1962.t1;5_prime_partial=true NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 1893 4718 . + . ID=g1962.t1.exon2;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 1893 4718 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 4934 5164 . + . ID=g1962.t1.exon3;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 4934 5164 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 5396 5581 . + . ID=g1962.t1.exon4;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 5396 5581 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 5714 6214 . + . ID=g1962.t1.exon5;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 5714 6214 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 6348 6788 . + . ID=g1962.t1.exon6;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 6348 6788 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 7045 10568 . + . ID=g1962.t1.exon7;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 7045 10568 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 10759 12418 . + . ID=g1962.t1.exon8;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 10759 12418 . + 1 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 12715 12804 . + . ID=g1962.t1.exon9;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 12715 12804 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 13066 13665 . + . ID=g1962.t1.exon10;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 13066 13665 . + 0 ID=cds.g1962.t1;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . exon 13934 14288 . + . ID=g1962.t1.exon11;Parent=g1962.t1 NODE_1059_length_14364_cov_40.1161_potentialcontaminant . CDS 13934 14288 . + 0 ID=cds.g1962.t1;Parent=g1962.t1;3_prime_partial=true #PROT g1962.t1 g1962 ILVGPGRSSQETLRNIAYNMLADLVHQVRGDLTLPQLVKVIGIFSRLVHDSTLPLSVQSTACKLLLNVTDLVVQKGSGDGSARQIILRILEVFVSKFGSLRLYIPRLARRKNRLQMQQQKGQSQSSSSSGVAPDGASGQADSTAGSGTGTQSQVSHLDAAAAFAEGTDGDAELDAVADELDGADAESEFAGPDILRPIKTAPPVDSAADGVRECRALMRTLITGLANIIWAVGQCNQNPSPVTPSPPEGRTFHAEEIPIFHRLVRNGLTCFDVFLSGVDGDATSASAASSAAAVASSAAAATSSAVAVSATAVGKEEKELLDNFSGVFAALDAVTFHEVFQAVMPLFFERLLKNQSLLVIAQHFLANPRVSKHFSSILLGFLVDRIGNLGGADADAAFLLLRLFKLVFGAVTLFAESNEPVLQPHLGEIITQSMRLSTTAREPTNHFLLLRALFRSIGGGKFELLYKEFLPLLPVLLEGLNRLQASAHRPALRDLFVELCLTVPVRLSALLPYLHFLMRPLVLALQGGPELVAQGLRTLELCVDNLSPDFLDPIIAPVRSELMVALWRHLKPMPYSPLHGHTTLRILGKLGGRNRTEFRGASDLPYKVHPGEHIGVSVKFPFANEDGETEYVDLPLDTAVVAAKDALASATVDAAHKRMAFEFLACCLASVVDSDEKDGDIESAGMALIAAARRRAADQLKAEKESRERDVDAAAKLVHQSLKSRPVIPQQHTQQPQQQPTLTSSPLPSPAVGANQVSAGTGAGAGAGGPSGPTAPAAPTAGTAGSTASPPVQPNGPPVPAAAAGGPQGTQQQQQQQQQQQQQQQQQPAASIPHQVHMSSAFTDRFDDWVDLRSLRGMWRVKSDESRAAFRDVLIALVSAAATPEVADIAAPFVRDVARHFALLALDAPSPSFPSNAGSNSAAATDNSQTTTTTTTTTTTTATAVDAAKSDDGPQPMDTDGGVSSAPSGKDAADGDAYGADIFVAAVTMCIGGESKDVSIAALSVVDAFLSFLGDFFGSEELSLRSPLVDLFARRLSALCHEREWHAKAGGVAGIAKLAKVLPSWWVERHVLRFVRALIFVTADINGEASAGLLEDAQDTLLEILKISNRHTLDDVASAPVASPVASVVTPKTDSDGVATAAATAAGSPAVQVKQEEVVAKPSDGSTDNGAVPMEGVVVKLEEGKEAVVAGKKPESAVVVVDGNGSGSGKEDASPAMDPALSARRAGQAYSRPVFRELVALLLFQLPSPNETVRKLVRKCIDTLAEVCGCLPSDLVEPLRETVITILPKSLRAWPLNVQVGLMDALAYLLSLRPSFLAPSDLLRSLLDETKTIIIELDESQQGRQPLYKNSAPIVGLRTRGMELLTAGLASGLLDLNEQDRNKIVTVFFRALSMRNQDMVDAAKAALGQIILQHRLSKDLLQQSLRPVLVSLSEHRRLSVPLLQGLSRLLELLTTCFNVTLGEKMLDHLRKWLDPAKLAQGQKAWKDADDIRIACAIVEVFHLLPPSANKFHDELITVVIQLERVYGREITSPYREPLLKFLNKYASESVDYYLGKLREQSYARMFQSLLNLESAAPLRKELCSKKANLLASTFRVTHDTSGWAEFRLQGILAVHTLSKWDPQWLAANPDVLECLLDAWSSLTTDVSQFRAETIGFGLSLTRGREPKLLASCLLDHARRAKDDINLLFRLLSAYQLPLPIDFSFLTVFYEVDVAKKYPLSLRYEILQRFFAKFQDPTTPESFKIHGLQKLIIPIAVCAFRRGDGRQLFDRDMISVFMSKILEQLPAELETATVSDALRIELLQMATVLVRHASDALVDHRKELIKYAWNHLKSEEPAVKHCGYILVCRFIEAFETPPKIILQVYVALLRAYQPESRALIRTALDILTPTLPGRLGASEREPRFPTWVKWTKKLAVEEGHSPLQLVHIWQLVAKHAPLFYYSRSQLALQMVNSLSRIGMPQSAGLENRRLAVDLAGIIIQWELRRLGDKDRDAKEPQLQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQAVVVKEEEAGAAPVGRPQQQGADDAVAMDGIEGNDSNCSSPGKRPAQDDPRPASEVKRARSESISVLSLPNLGAAAGAGQVQVPVVPSTVPAGQSQQGSQSFDDDFRPQQGIVEMVINFLVRIACQVHETPVASTPGQPAAPAAQGGSGNASAQADALSRRCIELLRLALSPLLWQRAVIKLAYFDKLLGGDVPGAPPQPPSQQPASVTTTPGAVVAAIDILELVLERQEPSQSIPAISSLCKGLGRCFITESPNVNAAMTRLIARLVQVYPPAPVLSSVRVGEDDGSGVVNGNGHKVQPQFHALHAPDRKSVPELDAFYDTVAAAIEEQFAQHERGVSAVVVQGRGLFAAVSLLRVVCGLYPQYLDRFIPPLVKAVQRLQRDHVTAIPAALSATQPAGQATGNLGNQGQQQASTQSLSASSVEVTHAQRLAQLLSVTIELVSTRVDMMSDVPRKSYLGAILVAIEKSNDVGLLRVIVRLVREWIEKHPPTRLPTIKERAALLAKMTSFEKRFPGDPSLHHSFLEIVLAVYTEPTLLGTDFTVRLEPAFIVGMRSNDLALRTRFLEVYGSAVPRTVAERLTHLLAVQSWEPMGGHFYVRQVVDLVAQIGDRDAAVWRAGQISRKDAPSLPLLSQRTTTSAVASIREDDSVSARIAMDTGDDGPTAMETDDGNAQNGEDDAATRVPAHKLLMDHSAYVSRIRSLKTGGVLSSLGAICHVSTDLAHAVWVGLLPRLWARVGVAARDTVAEAICAFLSKEYHQRQAQVRPSVIQCMVESMRTCTPMPDVSPVLLKHVARTHGCWHAAIELLDRRAAAIDAGDIVPRSPRTIDAPAVTAEGDQSSGPSQQLHFGPGPLAVPLPPVDGPLPAPTVEAMRDETRDALCSLYGLLREEDHLFGSWVLRRQYPDTASALALESQGFWARAQTCYEQLMVQARTGPFPGGEFALWEDHWVRCAKHLGQWDLLTEFAKAEGNAPLLLDCAWKLADWPAHKETLSIVEGMSSESAQFKIYRAFLAICHPTEQRLGDVQRIVDEGTQLALREWQNLPPVVSRPHVASLQQFQQFVELHESAQMLSGLQSGTSARPQTIPELKMILGTWRERLPNKWDEITVWNEVFTWRHHVFSAINTLLQPLAQDQTAGAASGNATLAYIGYHETAWTINRFAHMARKHSLLDVCLTSLNKIYTLPNIEINDAFLKLREQAKCHFQMASDYRSGLDIINSTNLGYFNPQQKAEFFVLKGCFQAKMGQADEANNAFSSAMHIYENLAKGWVAWGSFCESVFAESKQISWGEYAITCFFQACKNYPERKARRFIAKILWLLTFDDANKTLSAALDRHVEFVPADHFVLWIPQLLSCMLRPEATAAGTILKKIVRTHAQALYYALRTTFLEIRNAAHVQANLQQQAASQQGAPAQPPVKQEGDTASLVLAATAQSNAPANAPAAQGLQQANNPTQGQQQSGQAGTGQANPSQGNAPGNASQPQSGQSHPGVPQGGAPAPGSGGAAAGPAPPHRASISAPPSLRSVSAVMNALRMAHPVLTTSLESMIEELIARIKPIAEEELFRTTDVLLSECIQRAFAPAEPNQPSELTERRVPQQVEAHLKRVQQTLFVHAHARRFKPQFERDFDFSVPENCRLLTVIAKLAQWQDRLRLQLRDLPQSLRMENVSRYLAEFSSVDIDLPGEWLHPRGTRGPPNETVRVDKFLPRIDAVRRHGMSFRRIGIRGHNGKVYSYLLHFPSRHARSEERTVQLLRMLNGLLCRRKETRRRGIQFSVPEFVPLAPHIRLARDELSTTSLEEMAEEYFLAHGKSPLEPVLHCLRRYETCPHKYGTPEFEQFRRDLFAEVSSTLVPPHALSERLIASFPSAVELFEFRRQFATQLAAASIVGHALHIPTRLPHTVQWSLENGSVFLAEAYP # ORIGINAL: g14289.t1 original gene structure, not modified by PASA NODE_1881_length_8740_cov_40.2748 AUGUSTUS gene 217 3623 . - . ID=g14289;Name=g14289.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS mRNA 217 3623 . - . ID=g14289.t1;Parent=g14289;Name=g14289.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 894 3623 . - . ID=g14289.t1.exon1;Parent=g14289.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 894 3623 . - 0 ID=cds.g14289.t1;Parent=g14289.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 217 666 . - . ID=g14289.t1.exon2;Parent=g14289.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 217 666 . - 0 ID=cds.g14289.t1;Parent=g14289.t1 #PROT g14289.t1 g14289 MVARDGDGPLRLSWALRAFAQPDIPATSPQELVTPQEQSLLLDKIAALKRASSTGTTSSAASSAASLDWTGLKAVITGGGIQGHQLTDRKAALLELLHLVRDFLGEDAAHDDIEAAAACVFAVVADSSYEPQYCDSLDAAKRGLHDLAQSVVDRLRSAYGPVKIASAQKAVDVALRIRIWYQAQRQQGKPPGAASLPLLRDEFGANIDVPFEYDGEDGELPHGVWMCVANGGEGEDLASAHTPIDELYSDDDVNGLDELRGDGPATVYDSNWLLKTCGAIFSASNGVGLGVRDLQAAITDALLSAESDAETEERLFELVGMDHIELIGEILQHKEDILQNALDDSAGGAMHADGRHGRAGGAVGGARAAGAGASKLRAPAFGCQVTVATESEKLIEKQMRRDRKQQQKRAGGGAVDPDDGSGAMGGVTFDAALMRAQRQADLEAAAAAPLFTSSERTVKREKYPHVYDTLAESAVASAMVGGTKLLLPAGIERKTTSQCEEVRIPASKVLPPRAGERRVAVSEMGPVAQAAFAGMKALNRVQSIVFESAYTSNENLLVCAPTGAGKTNVAMLSIVREIERHIEKGVVKLNEFKIVYVAPMKALAAEMVRHFGQRLASLGLSVRELTGDMQLTKAEIMSTQMIVTTPEKWDVVTRKSTGDVALTLLVGLLIIDEVHLLADERGPVIETIVARTLRQVEASQKMVRIVGLSATLPNYIDVAGFLRVNPFTGLFFFDSNFRPVPLSQTYIGVKGTNRMQISSDMNEVCYDKVLHYVREGHQVMVFVHARNETVRTANALREMAMRRGHLSSFRSATEGEGFALAEKAISKCRNSAIRELFPDGFGIHHAGVLRQDRNLIERVFSEGHVRVLVCTATLAWGVNLPAHAVVIKGTQLYDSKRGSFVDIGMLDVMQIFGRAGRPQFDTHGEGVIITTHDKLSHYLSLMTHQAPIESQFVDRLADNLNAEISLGTVSNVDEAVQWLSYTYLFVRMCRNPNPMIYGVNATERSEDPSLGKRRRELVTAAARALDTAKMVRFDERTGYIAPTDLGRVASGFYIRHSSVE # ORIGINAL: g14290.t1 original gene structure, not modified by PASA NODE_1881_length_8740_cov_40.2748 AUGUSTUS gene 4511 8505 . + . ID=g14290;Name=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS mRNA 4511 8505 . + . ID=g14290.t1;Parent=g14290;Name=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 4511 4614 . + . ID=g14290.t1.exon1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 4511 4614 . + 0 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 4784 4913 . + . ID=g14290.t1.exon2;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 4784 4913 . + 1 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 5120 5368 . + . ID=g14290.t1.exon3;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 5120 5368 . + 0 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 5743 5950 . + . ID=g14290.t1.exon4;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 5743 5950 . + 0 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 6272 6351 . + . ID=g14290.t1.exon5;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 6272 6351 . + 2 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 6790 6868 . + . ID=g14290.t1.exon6;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 6790 6868 . + 0 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 7225 7334 . + . ID=g14290.t1.exon7;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 7225 7334 . + 2 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 7625 7691 . + . ID=g14290.t1.exon8;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 7625 7691 . + 0 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 8080 8164 . + . ID=g14290.t1.exon9;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 8080 8164 . + 2 ID=cds.g14290.t1;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS exon 8316 8505 . + . ID=g14290.t1.exon10;Parent=g14290.t1 NODE_1881_length_8740_cov_40.2748 AUGUSTUS CDS 8316 8505 . + 1 ID=cds.g14290.t1;Parent=g14290.t1 #PROT g14290.t1 g14290 MAATQSYMVSGTRFDMPPRYTPIKPIGQGAYGVVCSAIDNQTGKKVAIKKILKAFDHLTDGKRTLREIKLMRHFQHENVLCLEEILMPISWTAFDDVYLVTELMDTDLHQIISSNQPLTDDHCQYFIYQVLRGLKYVHSADVLHRDLKPSNLLLNGNCDLKICDFGLARISHEAELSEMNFMTEYVATRWYRPPEILLSNKQYTKAIDIWSVGCIFAELFLRKPLFPGRDYIHQLKLITDFLGTPSKEDIAAICSARAQSFVESLPFKPRMSFSSIFPNANPLAVDLLRRMLVFNPNERISCEDALAHPYLASLHDPNDEPVYFSSFDFDFERLPLTKDYVKELTFCEMLVFHPEGICMGPENPILPELARFQDTARVQQQQQQQQPHHLQQQQQHHDASMGMAAPQLHGMQNAMLADNSMAPEMASTATLYI* # ORIGINAL: g7424.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 37915 38989 . - . ID=g7424;Name=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 37915 38989 . - . ID=g7424.t1;Parent=g7424;Name=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 38887 38989 . - . ID=g7424.t1.exon1;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 38887 38989 . - 0 ID=cds.g7424.t1;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 38595 38678 . - . ID=g7424.t1.exon2;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 38595 38678 . - 2 ID=cds.g7424.t1;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 38250 38320 . - . ID=g7424.t1.exon3;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 38250 38320 . - 2 ID=cds.g7424.t1;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 37915 38013 . - . ID=g7424.t1.exon4;Parent=g7424.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 37915 38013 . - 0 ID=cds.g7424.t1;Parent=g7424.t1 #PROT g7424.t1 g7424 MQGAAAYVPLAAGSIDGTDTAPHDRGVARAMRSHYNASHDPKIATDARKTLFVGRLAADTSDVTGLARSYAFVEMESERGAEEAHRDAHRAELDGRRILVEFEVERTLPGWVPRRLGQ* # ORIGINAL: g7418.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 9959 12222 . + . ID=g7418;Name=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 9959 12222 . + . ID=g7418.t1;Parent=g7418;Name=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 9959 11289 . + . ID=g7418.t1.exon1;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 9959 11289 . + 0 ID=cds.g7418.t1;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 11517 11683 . + . ID=g7418.t1.exon2;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 11517 11683 . + 1 ID=cds.g7418.t1;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 11780 11953 . + . ID=g7418.t1.exon3;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 11780 11953 . + 2 ID=cds.g7418.t1;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 12125 12222 . + . ID=g7418.t1.exon4;Parent=g7418.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 12125 12222 . + 2 ID=cds.g7418.t1;Parent=g7418.t1 #PROT g7418.t1 g7418 MNDAKEGGSSVAAYDAHSHSNVEGGGWSESQLDDGTAALGIGDSDAIDEDIDAPYVLSQGAGAGVKHTLPQFTADTTFPPVERSRAHAVLFDTADIRGFPTDPPPRPPRPSPPTFADKWDADFVRMPCSGNNTIALEDDDSLSRSTHKIKRRWDVIWSELSARFSTTYDLEIAILRYNPTHAKQWNFGALHYFVNFMCEDAERQMYMEEVLPAIVQLALRLPEICTAPIPLLRRETAGAVTMTQLQAACIVANAFLCTFPRRNSHNRRSEFASYPPINFIGMFSSESARLPRTLHGDEVHCSTKTAGKFRCIFNYFRRVTASPPVGTITFYRRWARKGENWSASREPLTDLEVRSVGTIEDDGDGLLQADFANKFLGGGALSKGCVQEEIRFMICPELIAGMLICEELGPLECIVVVGAERYSNYAGYASTFEFAGSHADITDRDVFGRRMTSIVAIDALVFREHASQFGKQQVDRELNKARVGFTRDDPDGTPEGVATGNWGCGAFGGDRQLKAIIQLLAASVARRPMLYFTFGDEVLARELSTLHTSLRAKGCNVGSVYRAIDVYGSMGRSRSSTNCGLFKHLDDCL* # PASA_UPDATE: g7425.t1, single gene model update, valid-1, status:[pasa:asmbl_7987,status:3], valid-1 NODE_52_length_49062_cov_41.8779 . gene 39187 43503 . - . ID=g7425;Name=g7425.t1 NODE_52_length_49062_cov_41.8779 . mRNA 39187 43503 . - . ID=g7425.t1;Parent=g7425;Name=g7425.t1 NODE_52_length_49062_cov_41.8779 . five_prime_UTR 43333 43503 . - . ID=g7425.t1.utr5p1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 43249 43503 . - . ID=g7425.t1.exon1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 43249 43332 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 42769 42995 . - . ID=g7425.t1.exon2;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 42769 42995 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 42400 42634 . - . ID=g7425.t1.exon3;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 42400 42634 . - 1 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 42125 42259 . - . ID=g7425.t1.exon4;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 42125 42259 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 41444 41998 . - . ID=g7425.t1.exon5;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 41444 41998 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 40873 41259 . - . ID=g7425.t1.exon6;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 40873 41259 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 40425 40678 . - . ID=g7425.t1.exon7;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 40425 40678 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 39934 40265 . - . ID=g7425.t1.exon8;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 39934 40265 . - 1 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 39563 39768 . - . ID=g7425.t1.exon9;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 39563 39768 . - 2 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . exon 39187 39452 . - . ID=g7425.t1.exon10;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . CDS 39303 39452 . - 0 ID=cds.g7425.t1;Parent=g7425.t1 NODE_52_length_49062_cov_41.8779 . three_prime_UTR 39187 39302 . - . ID=g7425.t1.utr3p1;Parent=g7425.t1 #PROT g7425.t1 g7425 MDVTGEFRLGSGDVLTADDAARVAAWLQTAQRDINCLADENRNTRRRAVEKLRVVLQQATGAQAELSSQPCRRALASSVIKPLLRLFADPGEKCREVAIGAVSDVVLGLDPVDTALPYVLPVLVSRLAVAEPVEPAEELRLAAIDLLCALVGRAGRGIAPFVQDVNNVLLRTLFDRFPEAKKASCKCVVVLAAAVPDKFHYQAQPLVPPLVSCITHPHSRVRQAGIEALCATILNGAVGSLDELMPSLAALTNDNTASVRRAAIDSVGRWMRELTDRYSNTQRLVPLLFSGLSDESPEVAECARANADAAGALYEAEYPDEVKDRLDYDPSANAPGRPRLGLRLLVQRNVGKILPAVLREVCEWTPSIRTRAAGLLYQLLLHSEAFVTQHLESVLSTLSRAVGDEEPAVAMRAVACSEVVGRFVDPDASLGVLLPQLRLASSPQMKANILLVLGAVLRGGLGGADLASHGDRLASAIADPEVCRSEHTALQEVVAATASDIIVRCFQSAASGATGDVAPFLVFQALLCVQGLATTPTIAFKAASGIEALAAARGRSVQGLYEEYLDRLLGALEATSGVWTKHSPERALFETVVTCAGPAVASHLSRVCPLAAKAMDPARDPDVRVRLFALFSRLVLENSPALDPAGALRAHTVHLFDAAIAPNCVWRAGRTAAAVRTAAVTLLWALLRAGAFEAASVPTDRLVPVLVAALDDDNQSTRRAACHATTELIALASDWEVDRLHQLYPELLKRLDDSSDEIRAGIAATFAAFVRRIPADYDRDLYRAHLELMYRGLLVHLDDPNATIQEAILEVLKAAAPIHPSLLLEYVLPARHKHRTSQYCDALIAYVESARAPQ* # PASA_UPDATE: g7417.t1, single gene model update, valid-1, status:[pasa:asmbl_7984,status:12],[pasa:asmbl_7985,status:12],[pasa:asmbl_7990,status:12], valid-1 NODE_52_length_49062_cov_41.8779 . gene 5138 9028 . - . ID=g7417;Name=g7417.t1 NODE_52_length_49062_cov_41.8779 . mRNA 5138 9028 . - . ID=g7417.t1;Parent=g7417;Name=g7417.t1 NODE_52_length_49062_cov_41.8779 . five_prime_UTR 8774 9028 . - . ID=g7417.t1.utr5p1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 8460 9028 . - . ID=g7417.t1.exon1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 8460 8773 . - 0 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 8061 8307 . - . ID=g7417.t1.exon2;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 8061 8307 . - 1 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 7554 7894 . - . ID=g7417.t1.exon3;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 7554 7894 . - 0 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 6519 7245 . - . ID=g7417.t1.exon4;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 6519 7245 . - 1 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 5994 6254 . - . ID=g7417.t1.exon5;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 5994 6254 . - 0 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 5596 5709 . - . ID=g7417.t1.exon6;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 5596 5709 . - 0 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . exon 5138 5406 . - . ID=g7417.t1.exon7;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . CDS 5368 5406 . - 0 ID=cds.g7417.t1;Parent=g7417.t1 NODE_52_length_49062_cov_41.8779 . three_prime_UTR 5138 5367 . - . ID=g7417.t1.utr3p1;Parent=g7417.t1 #PROT g7417.t1 g7417 MSKMPAGENIAVCVRVRPLSTTELRRNEYGVWEVDEDTRVIVQRLPPTLDTKGNKKPHVFHFDHAFDSKPTESVYEAVGEGIVISAMDGYNGTVFAYGQTNSGKTYTMKGVADEPGFIPLAIQDVFSYIQETPEREFLLRVSYIEIYNEVINDLFEPESTNLKCHEDPKRGVYVGGLKEHVVVSPDQVVSLLASGEAHRHVGRTNYNSVSSRSHTVFTMVIESRDRANAARANAGASQSRGSRTTMADGKSIVRLSTLSLIDLAGSEKIADEEVRRREGGYINKSLLTLGNVISKLSEGQGGHIPYRDSKLTRVLQNSLTGNARIAVVCTISPTGSCNEESLNTLKFAQRAKKITTSAKFNEVADESALLQKYRQEIMELKERLRSLEGLGAAEVELQALKRENSKILEELQEKEMVSVAMRERIGQLTKMILTSTASPPIQAASPAPGGSARASPAEAVHPSDRAPAAALAAAHAGARAESSGGDSARTMRQQSIRNNRRHTIGADSQQHAADVAAAAANVAASASASAMGDSAILEEDETGSSIGQPRQAWVLSKQKSLDNIGMQQNGDNNSAAIATLKRRLAEKEDELAVLRTANVALTAAVEELQSSVVRAAEERADAAAWLSENADHRGMSISGLLSENRLLKGRLDASVDTAARLMQLLQSHGIQLPHGIVEHQ* # ORIGINAL: g7422.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 27926 30354 . + . ID=g7422;Name=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 27926 30354 . + . ID=g7422.t1;Parent=g7422;Name=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 27926 28045 . + . ID=g7422.t1.exon1;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 27926 28045 . + 0 ID=cds.g7422.t1;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 28150 28892 . + . ID=g7422.t1.exon2;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 28150 28892 . + 0 ID=cds.g7422.t1;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 29255 29573 . + . ID=g7422.t1.exon3;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 29255 29573 . + 1 ID=cds.g7422.t1;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 29776 29936 . + . ID=g7422.t1.exon4;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 29776 29936 . + 0 ID=cds.g7422.t1;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 30162 30354 . + . ID=g7422.t1.exon5;Parent=g7422.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 30162 30354 . + 1 ID=cds.g7422.t1;Parent=g7422.t1 #PROT g7422.t1 g7422 MAVQPSDRRLVVVPRWEGFLFSAVSPMIAAVITNPFDVAKVRVQLQGELSKGGQRVYNGSIDCIRKTYRHEGIRGLQKGITPALFREGSKNFFRLGLYDPIISSIHDKTKGPAPAWKRIIAGGISGAMGAAACNPFEILKTRMQSQAHGTIATGHQFNYTSLRNGFQTVLATEGVRGLYKGTTTSMARSTVATGLNLPAYTMMREFIVGGGYARDSTGVDMLCSVSSAFFTVLGSNPIDVVRTRLYNQPVDEKGQGTLYKNGLDAIVKVARAEGVGALYKGWISHFMRLGPHFGLSLSIMEAFNRVERRRIGERDRRTELLEMFQALDSDGDRTISRAELLAMFELVTPRTSSTGDGEYRAALQKQVDAVMERGDTDHNGSLDFEVSDCAAIGPEFAAVSDHLAREMHQFEMRRIFKAIDTENTGFIDEAHLFNAIKRMRLPIAPGDKYLSQEEYENKLHRYTERAISAADTNHDGKVDFSEFSEIHKQLDHIRADSFYRKWMRSAGVPST* # PASA_UPDATE: g7426.t1, single gene model update, valid-1, status:[pasa:asmbl_7988,status:12], valid-1 NODE_52_length_49062_cov_41.8779 . gene 45074 48304 . - . ID=g7426;Name=g7426.t1 NODE_52_length_49062_cov_41.8779 . mRNA 45074 48304 . - . ID=g7426.t1;Parent=g7426;Name=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 48197 48304 . - . ID=g7426.t1.exon1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 48197 48304 . - 0 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 47936 48054 . - . ID=g7426.t1.exon2;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 47936 48054 . - 0 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 47715 47853 . - . ID=g7426.t1.exon3;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 47715 47853 . - 1 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 47274 47569 . - . ID=g7426.t1.exon4;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 47274 47569 . - 0 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 46375 46863 . - . ID=g7426.t1.exon5;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 46375 46863 . - 1 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 46090 46265 . - . ID=g7426.t1.exon6;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 46090 46265 . - 1 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 45828 45959 . - . ID=g7426.t1.exon7;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 45828 45959 . - 2 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . exon 45074 45635 . - . ID=g7426.t1.exon8;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . CDS 45460 45635 . - 2 ID=cds.g7426.t1;Parent=g7426.t1 NODE_52_length_49062_cov_41.8779 . three_prime_UTR 45074 45459 . - . ID=g7426.t1.utr3p1;Parent=g7426.t1 #PROT g7426.t1 g7426 MSYDAFAAARGKHAADDDNFQPDAKRARFDSAAPGGDNNQMNQDVPPSRVVHVRAVTDGAQGSDLTSAFGPYGNITYLVVMPKNRQALVEYETIAQASAAIAAGQQSRVYILGRPVYVNFSRSQQIARTRNNPSALGGGVGGVGGSVEGGAQPSKVLLLTVSNPQYPITPDVIHSVASRVGQVLKIVVFHKTGVQAMVEFESVQSAVAARAALNNQDIYPGCCTIRCEFSKSETLNIRRHDENSRDYTQPLPHPGAAPSFLAGPPGGPSSFGAGQHPGPHGGHGPHVSHAQYGGAPFMQQQQQPPPFGGQYGQQHGGAPGAHGGTSVVMVYGLDPRVNCDRLFNIFCLYGNVMKIAFLTNKAGTAKVQMGDTQQAEAIIQNLDRAVLFDAPITVTPSKHDYISANARAGTAVQMLPDGTPAIIDFSTSQLNRFLSMKSAQKNRITRPTRVLHFFNAPADCTPDILSTAIAAKGAEAPVLIKIASDPAAGKPVFGTAEFRTVQQAIDAVALANHMQVSSVSGEPSYIVKLAFSVAAAAAANRMAQ* # ORIGINAL: g7416.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 1887 4680 . + . ID=g7416;Name=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 1887 4680 . + . ID=g7416.t1;Parent=g7416;Name=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 1887 2909 . + . ID=g7416.t1.exon1;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 1887 2909 . + 0 ID=cds.g7416.t1;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 3046 3267 . + . ID=g7416.t1.exon2;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 3046 3267 . + 0 ID=cds.g7416.t1;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 3466 3778 . + . ID=g7416.t1.exon3;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 3466 3778 . + 0 ID=cds.g7416.t1;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 4127 4680 . + . ID=g7416.t1.exon4;Parent=g7416.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 4127 4680 . + 2 ID=cds.g7416.t1;Parent=g7416.t1 #PROT g7416.t1 g7416 MDSLGSGLPVAPKRSREDGVDPRGGARPRSENPADGQRQQHGGPRGGGGGGGGGGGGGGGGMGGRGGRGGRGGSAGPQRTFRPQGAPGEGQAGIPSDAHRAAPQRQPQQQQQQQGPPNTSAAPSSGQSRGSRRNRGPRQAAAPRDPVDEVEMAGMDIDSAAPDGVPHASSTATATGTSGASSIHLTTTRFSSLPISPASLRAIETVLKFSFMTEVQLATLPHIMEGKDVLARAKTGTGKTLGFLIPSVERLLVSQPARGSISVLVMSPTRELATQTATEAAALLKFQALGVQCVFGGTNINSERNRLSSQPCDILVATPGRLTDHLENSPGLRDRFSNLKVLILDEADQLLEMGFRPAIERIIKLLPDVRVTPRQTLLFSATMPQQLHQVVGLCMRPGHQFIDTVGEEDVHTNVQVEQEYIVVPLEEQMRALMMLIQLERRNTGHKIISFFTTARLTQFMAELCNAAGIPVMEIHSRKSQAQRTKVSDAFRAAREAVLFSSDVSARGIDYPDVTLVLQVGVPSDREQYIHRLGRTARAGKAGRGVLMLAPYEHYFLRNLKDLPIKEGWTPPQSDEIDATVQRALGHLPATIKSMAYQAWLGFYNSARGTGWDKPTLVQWANRFAEIIGCESPPPLQAKTVGKMGLKGVPGIVIEGRGGQGDHWGGDARGGSHGGGYGGGGRGGYGGRGGFGGRDGSNRGYARE* # ORIGINAL: g7415.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 115 1188 . - . ID=g7415;Name=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 115 1188 . - . ID=g7415.t1;Parent=g7415;Name=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 1021 1188 . - . ID=g7415.t1.exon1;Parent=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 1021 1188 . - 0 ID=cds.g7415.t1;Parent=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 379 444 . - . ID=g7415.t1.exon2;Parent=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 379 444 . - 0 ID=cds.g7415.t1;Parent=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 115 207 . - . ID=g7415.t1.exon3;Parent=g7415.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 115 207 . - 0 ID=cds.g7415.t1;Parent=g7415.t1 #PROT g7415.t1 g7415 MDNNQQKQQKGSDSHHYTKDELMSMHPHDLKEILEKKGIDTSTIKEKDFLVERILELEMRAHVALAVLLVTASFCAAEDFWTHKVTTDAEFDAFSTSVSTVMNLGKSLK # PASA_UPDATE: g7423.t1, single gene model update, valid-1, status:[pasa:asmbl_7986,status:12],[pasa:asmbl_7992,status:12], valid-1 NODE_52_length_49062_cov_41.8779 . gene 31144 37231 . - . ID=g7423;Name=g7423.t1 NODE_52_length_49062_cov_41.8779 . mRNA 31144 37231 . - . ID=g7423.t1;Parent=g7423;Name=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 37029 37231 . - . ID=g7423.t1.exon1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 37029 37231 . - 0 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 36464 36655 . - . ID=g7423.t1.exon2;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 36464 36655 . - 1 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 34562 36173 . - . ID=g7423.t1.exon3;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 34562 36173 . - 1 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 33971 34216 . - . ID=g7423.t1.exon4;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 33971 34216 . - 0 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 32599 33766 . - . ID=g7423.t1.exon5;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 32599 33766 . - 0 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 32161 32452 . - . ID=g7423.t1.exon6;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 32161 32452 . - 2 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . exon 31144 31934 . - . ID=g7423.t1.exon7;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . CDS 31784 31934 . - 1 ID=cds.g7423.t1;Parent=g7423.t1 NODE_52_length_49062_cov_41.8779 . three_prime_UTR 31144 31783 . - . ID=g7423.t1.utr3p1;Parent=g7423.t1 #PROT g7423.t1 g7423 MSCGSRSAVTVPRKGIRPRQNSAAGGAAGAAGGPLPIEDGFGWDGFGEYMRLKRQKLDGQFADGEEFDLQKVSDIFRGVRIYVDGHTTPPAHELKRIIRAHGGEFDLYHRSKGSITHVIATNLPDTKLKQNTYARVVHPDWLLESIRAGRQLPWAEFALGASRVRTQRALPFAARRDQAPHDVSCTSGSEAVRVGENPGCVRGGCEGNHSDGVDAHVTGGGKATDESPDRDGDAAHVRSRFSDHRESTAATNYASVPFGVLYDEEGDGEITSILSPASAFGLLEDARASSDEEPQQRALGNEDACAAQMAARVAERSSGDACDPPIPDTADVPARCDAVVQPIGSLGIIGENGTPATSKSCLSRASDGRGHLGGIGGIVNYYKRTAPARDDDAVHHEVELPGSPETYDSSRMDGDFVASYYRTSRLHYLSTWGAEVKRWTAEMLASRPPSPPVPTDERPGERIVVHVDMDSFFVSCSLVDRPDLAGKPVAVAHSTRAGATANPQEHAQHGKDGNMATVAGLGGVHSTSEIASCNYVARSFGIHNGSYVGESLRKCPGLIVLPYDFDRYKRASWAFYEAVLRCSRTVQAVSCDEAYIELTRIPAGESAESLIAALRRDIAAATGGLTASAGIASNMLLARMCTRVAKPNGQLRLAAGSPSAVMAFLAEKQVSDLPGVGWSAAKRLRGIGVDSCADLALVAVETLQAEFGPKMGKTLHDACRGIDDRPLQSSRERKSVSVEISWGVRFTDQNKVEWFLGELAHELSTRMRELDVVGSTLSLKVLSRKEGVNVVHKYMGCGPCDALSRTARLDAPTADPGEIAAHLTPLLRAMDVPPVKVRGMGIHVTRLAPASGRPRTMERGATKGPVSVRDMLLSRRGDNNAVAGHSSHSAPSGNLQLRTIQTEVPPDAVARVTPHGTACARVGDRKGKGRAVEGGETEPEPRGTVGAWEKTLPPPSQIDLAVYQSLPDDVRSELRRAYADDGTHLMLASPPVAREAADGMSLDGLCDADRTHGESSAVAGVWIGCRGGFEGMGGSATDSAVRGLAFVEDGNCTLDARDLLASPGAWDPTVADALPPDILGELRDEHYRRRALVSGGGATREASHMKAAALEDARWTHGSRSLDMPVADKQTNPSDREDWDGRADRSLRPACCGNMQSVAAAALTQVAVPAAGFPLASFGGCTHVTAICDRVSAWVAASEASAVRDQDAAEFLSFIEAAFSPSMMAPDVALAALETLRLRCASDDGWRAIFNEMLACAQGLSVVSLGGRLPLTPLVSLSRRAQPDKSK* # ORIGINAL: g7419.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 13296 20446 . + . ID=g7419;Name=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 13296 20446 . + . ID=g7419.t1;Parent=g7419;Name=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 13296 13790 . + . ID=g7419.t1.exon1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 13296 13790 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 14023 14154 . + . ID=g7419.t1.exon2;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 14023 14154 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 14471 14649 . + . ID=g7419.t1.exon3;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 14471 14649 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 15037 15717 . + . ID=g7419.t1.exon4;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 15037 15717 . + 1 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 15955 16098 . + . ID=g7419.t1.exon5;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 15955 16098 . + 1 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 16234 16542 . + . ID=g7419.t1.exon6;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 16234 16542 . + 1 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 16781 16883 . + . ID=g7419.t1.exon7;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 16781 16883 . + 1 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 17039 17860 . + . ID=g7419.t1.exon8;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 17039 17860 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 18016 18423 . + . ID=g7419.t1.exon9;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 18016 18423 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 18635 18862 . + . ID=g7419.t1.exon10;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 18635 18862 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 19058 20446 . + . ID=g7419.t1.exon11;Parent=g7419.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 19058 20446 . + 0 ID=cds.g7419.t1;Parent=g7419.t1 #PROT g7419.t1 g7419 MGSVGDYETDLYSESVGSFENRQNYKKSKRSIVTWIKNGLFGVLFTTVKDSSVPALVAIIEIVVDAFQVLAFPFSHRFNFPWNHEATEWFARLCSIFVPEVYVVGRDGWFLAGLALVVAMLADVIFVGYSFSRKSYRMMWTIKLLRAFGGLFSTILFIPLLGLLTGKLSCDGISDCAEGIDLMYKILSVIVSLLFIFLALCTAATLYDQDPKGRDVLARPHARLDLFYLLVRTVLTIMQNTVPVTTAGSWVFIATMVIGSLASAFLHTWYIPYYRFGYSMLRNASQWLFASGCLCAVLAMVRNNPNQSEASLLFFLSSPLVLALSMFTISARRRALLAKKIRMCRDPYEVELRIRFALENENMLFAVEEEYDIDAELNEAQAAARLATLRSINAMYAEAVKRRPKSSLLHVFWAHYYLLHLNNSNMALAELANAEDLSPPLDEQFLIYRRQALLSEAASQSGGQSGVDVIAYVQYQKHLADSEKFDRRVAGSRAAFWTELGRANPGMQKLHYLGELISLNLSRAMASYESLVKLAPESPQVLRMYASFLIDIMNEVSQGEELVARAEGIEDARSKNAAQSDDCDVAFDDSNATVTISGARGKEGIVLDVNMAGCRLFGYRRHDMIGKNVNMLIPSPIAKNHNRIVANYLASGYGSMLDRKRKIVCIHANGYIVPANIVIRQAIDTQGSTCFIGVLRAIVSQEHFLVLDRNGMLLSCTAGVTSLFDTTIESINEDEVHVTSIIPEYPSIADVALAATKGSAKPPVLHQTCGASQSLHSLTISCIRMESCGEFIDIVSISAVSDDGDGGSPRPRFESDSYLPSHVSDDLPHLEQQPAHPLRPIPGHSQPQTALQLKMAECHRTGESGAPAVAVGRAGARTGGILHPYIPKSESHGGSMSVDGGLYGMAHYDTKGEEDEHAPPHHGIGMRSRASVRFGSVEVSHEPLQPSTSAIQLSEVEMEEVNSRHGHEMHDGILQDANGGDVAKDGKKKRKSGGGSIASSGGTDNSARQRTRTIIEDKNSRSAAETLRIKWGSLFAVAIVIGLAIASIIVLRSAASQYTDAIVCVSEGGTRRLDTVTVARDVRTLVLAAANMSVDVQISALQEELFSSAARLKEHQAKLFTGGLCLTSELESTYLTKTVPIVIIGASRVQMMNLWEAVQLYVSKAMQIAAHDPSTVSIDDEAVQFVLQNGPYSLLDAIELSCNQYEAEVSKKADTLKTRTVILSAVPLSCLVVIFIVIICPALLRLEKRKAVLMGIFLAIPRRVVRTLMDKDRMRLESMLAREDFANEILFDEDNAPPPGADNGQRKTEGDDSSLASGSTTAVPGGPPRPVMRQAHRKEPWITHASRSLRAQRGVLLRLSVLVVACASYYIALLVVGENLVADVGASGDEVNWSDRRSSVARLVFYHTRESVVANTTAGSLASASRALAHTTALMGIDDGLLYGSAAMSVPASARRRPISNLMFGDSCQYVPAVPPGYPECALFNEGIMTLGLHPALFEYCEKAAQISSVAANTTRPLSFAAMRELVRTSPGLMFVRMMDWAYLQGPLQAATALYETNGSSKVSTFQSFVLVISLVEIFAVALLWLLVFRPMTARIEGQIRNSRLMVLMVPQDEAPMLTSSIRSFLKVW* # PASA_UPDATE: g7421.t1, single gene model update, valid-1, status:[pasa:asmbl_7981,status:12],[pasa:asmbl_7982,status:12], valid-1 NODE_52_length_49062_cov_41.8779 . gene 22101 27534 . + . ID=g7421;Name=g7421.t1 NODE_52_length_49062_cov_41.8779 . mRNA 22101 27534 . + . ID=g7421.t1;Parent=g7421;Name=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 22101 22298 . + . ID=g7421.t1.exon1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 22101 22298 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 22408 22524 . + . ID=g7421.t1.exon2;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 22408 22524 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 22905 23657 . + . ID=g7421.t1.exon3;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 22905 23657 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 23974 24119 . + . ID=g7421.t1.exon4;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 23974 24119 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 24408 24423 . + . ID=g7421.t1.exon5;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 24408 24423 . + 1 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 24596 25041 . + . ID=g7421.t1.exon6;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 24596 25041 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 25194 25225 . + . ID=g7421.t1.exon7;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 25194 25225 . + 1 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 25370 25854 . + . ID=g7421.t1.exon8;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 25370 25854 . + 2 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 26020 26099 . + . ID=g7421.t1.exon9;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 26020 26099 . + 0 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 26270 26794 . + . ID=g7421.t1.exon10;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 26270 26794 . + 1 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . exon 27012 27534 . + . ID=g7421.t1.exon11;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . CDS 27012 27408 . + 1 ID=cds.g7421.t1;Parent=g7421.t1 NODE_52_length_49062_cov_41.8779 . three_prime_UTR 27409 27534 . + . ID=g7421.t1.utr3p1;Parent=g7421.t1 #PROT g7421.t1 g7421 MTEEWMQTRDWLVAAGALPADAEAAQPDATVVQFAFALQDGFVLGTLLNRLVAGAIATLHEAPTLQFLCYENITNFVEGCTKHLGVKQTDLFEPDELFYATNFEKVLIALWRVSESKPAISFGLPPIVHRDAKVRAAVAEEESLYGNLSSLLERSLSARQDNYAHLRADEVYGNADEFYDSVVKIQGVVEAPTPVPPGVDKRSFVLSELVDTERNYCEDLRLLCDVFQPAVSRLSFVAPEDVATLFSNVGELRDMHVQMLAGMDAALMQNDRVSAVFLQAADGLLRYGQYCANIPDAVAKVHQLMDDIKSPYTEQQQREFNAAHREARKAAKTGFALNDLVSVPMQRILKYPLLLKELIKYTPVKHADFQGLANSLTAIKDVAAHINEAKRDRDNMRMTESLQQRIDEYEGLPLSSYGKLLKDGDMRVRLPSENKVKPRYLFLFETAFLVCQPKGNRYLHKETIGFAGSSIEDVPYVHGEEVHAWALRTPQGACSLYAKNADAKAKWMTAFRSAVTSNVPDAQLRIEVTGDVALTRPHTYKLTTYTKPTFCYFCHSLLWGIINQGFKCQQCGIDSHKKCIALITGNCGDIAAHKGSIVGGSPLMLRQNSSQLLSDEEALRKTISAKLSQLASAPASSQGLPSSSASAAAGQPTLGRTSSVARLDEPPLPPGIGQARASGAPAGAAAAMAGDVGLGVCVALYAYDGGRDDELRFFKGDEIALMDNKDPVWWKGELRGIVGLFPSSYVEHIRPEQTVQSRRPLPVIPAAGSVRGAPQPPQATPAMNSAPAMHHQGHQARHSQGPAHIALASHAYPSLSSSGSHQHQHQQPLPQPQPQQPQPQPQQPQPQAHVPPRGSVACPTLPPSEPPFTNDDEYLTPDDVTRLRGSVDWKTRVYFHGRISRGEAEARLYPEGVGCFLVRESETRMGEYSLSLRSTQAVKHIRIGNKDGSFCLAETRLFPSVPDLIACYCAESLAQHFKDLHFSLTAPCTRPSESAAPSPGATAVGRPRMKMARAEYAFHGQNPDELSFPEGAELTVIEKFADGWWRGEIGGRRGVFPGSYVCEL* # ORIGINAL: g7420.t1 original gene structure, not modified by PASA NODE_52_length_49062_cov_41.8779 AUGUSTUS gene 20811 21485 . - . ID=g7420;Name=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS mRNA 20811 21485 . - . ID=g7420.t1;Parent=g7420;Name=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 21408 21485 . - . ID=g7420.t1.exon1;Parent=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 21408 21485 . - 0 ID=cds.g7420.t1;Parent=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 21208 21322 . - . ID=g7420.t1.exon2;Parent=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 21208 21322 . - 0 ID=cds.g7420.t1;Parent=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS exon 20811 20902 . - . ID=g7420.t1.exon3;Parent=g7420.t1 NODE_52_length_49062_cov_41.8779 AUGUSTUS CDS 20811 20902 . - 2 ID=cds.g7420.t1;Parent=g7420.t1 #PROT g7420.t1 g7420 MAEPICHTLTASYSHGGVVKSTYSYEVTGLASLAENITRLRETSGRDLTVVIEEQRASVGNAKGGHVAASKDDDMDSDESDVEDVVHIAKKPRT* # PASA_UPDATE: g520.t1, single gene model update, valid-1, status:[pasa:asmbl_1980,status:3], valid-1 NODE_1560_length_10477_cov_37.6903 . gene 1579 8812 . + . ID=g520;Name=g520.t1 NODE_1560_length_10477_cov_37.6903 . mRNA 1579 8812 . + . ID=g520.t1;Parent=g520;Name=g520.t1 NODE_1560_length_10477_cov_37.6903 . five_prime_UTR 1579 2282 . + . ID=g520.t1.utr5p1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 1579 2409 . + . ID=g520.t1.exon1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 2283 2409 . + 0 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 2682 2787 . + . ID=g520.t1.exon2;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 2682 2787 . + 2 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 3204 3333 . + . ID=g520.t1.exon3;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 3204 3333 . + 1 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 3862 3936 . + . ID=g520.t1.exon4;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 3862 3936 . + 0 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 4160 4204 . + . ID=g520.t1.exon5;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 4160 4204 . + 0 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 4559 4715 . + . ID=g520.t1.exon6;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 4559 4715 . + 0 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 5078 5345 . + . ID=g520.t1.exon7;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 5078 5345 . + 2 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 5707 5861 . + . ID=g520.t1.exon8;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 5707 5861 . + 1 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 6371 6546 . + . ID=g520.t1.exon9;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 6371 6546 . + 2 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 6829 6883 . + . ID=g520.t1.exon10;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 6829 6883 . + 0 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 7049 7178 . + . ID=g520.t1.exon11;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 7049 7178 . + 2 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . exon 7421 8812 . + . ID=g520.t1.exon12;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . CDS 7421 8168 . + 1 ID=cds.g520.t1;Parent=g520.t1 NODE_1560_length_10477_cov_37.6903 . three_prime_UTR 8169 8812 . + . ID=g520.t1.utr3p1;Parent=g520.t1 #PROT g520.t1 g520 MDRKRKSIAAGPPLQSPSGVREDSRIFVHVIEAKNVPRKKKKNGPVTTFVVVSIGGKSAKSPTVKTPTAPSWDYECEFFNLHPYFESLVISVFHHGRFRNTLLAEAVIPRESLKADECEQQDWYEMAPKTGHTGDMPRVRIKYTFMKETILPLNEYETLLGLLQSPDLESVTALSSSSSNMVEVSKTLIKIMEGTDSAVRFLKNVTSHEINSTSDPNVIFRSNSIAAKSVDAYMKLVGIAYLQKVLKIPLKKIFADQRSCEVDEAKLGADAKPGDVNRNVTVLLSHVSKLTTAIFESSDDCPMPLRIVFHHIQGEAVRHFPSSDVIRYTSVTAFIFLRFFCPAILAPKKFGILDLDPPDAKKKRTLLLVSKTLQNLANLAGFGWKEEGMPIEVMNAFLAENKEKMKEFVQLISSSENIIDMDADGSKTKRLRRTLSRRSERPISMGLMDLPKIDLERELSCIFRHLWRTRGELQKYVQQHGRSQALLHVVDELERRHIAANVLASQPNAPTSSSSSSQPPHGRTRSFSRSSHHGSPRPHTPSTSSTSKKTEEKQTLVSSTGQETPDVLSPIVDRHSSAPTHSNKANGGVGGDGDGNDEDYAITKAAAVAAAQFAASVQRHDTRSGSYLIAAKSAESMLHTDARTSSQASLADIAGVGGNDVAVTRGTSSMSASGAVGLGIGADDGASGRTLGASASSATVMNVIAMGTLNKGTSRDHLLSTGL* # ORIGINAL: g519.t1 original gene structure, not modified by PASA NODE_1560_length_10477_cov_37.6903 AUGUSTUS gene 417 787 . - . ID=g519;Name=g519.t1 NODE_1560_length_10477_cov_37.6903 AUGUSTUS mRNA 417 787 . - . ID=g519.t1;Parent=g519;Name=g519.t1 NODE_1560_length_10477_cov_37.6903 AUGUSTUS exon 723 787 . - . ID=g519.t1.exon1;Parent=g519.t1 NODE_1560_length_10477_cov_37.6903 AUGUSTUS CDS 723 787 . - 0 ID=cds.g519.t1;Parent=g519.t1 NODE_1560_length_10477_cov_37.6903 AUGUSTUS exon 417 497 . - . ID=g519.t1.exon2;Parent=g519.t1 NODE_1560_length_10477_cov_37.6903 AUGUSTUS CDS 417 497 . - 1 ID=cds.g519.t1;Parent=g519.t1 #PROT g519.t1 g519 MDATDQAASAGANDALDDEFARFEQEISAAADQAEADSANAKLEDEFT # ORIGINAL: g6886.t1 original gene structure, not modified by PASA NODE_822_length_17294_cov_38.7275 AUGUSTUS gene 686 3147 . + . ID=g6886;Name=g6886.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS mRNA 686 3147 . + . ID=g6886.t1;Parent=g6886;Name=g6886.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 686 784 . + . ID=g6886.t1.exon1;Parent=g6886.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 686 784 . + 0 ID=cds.g6886.t1;Parent=g6886.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 949 3147 . + . ID=g6886.t1.exon2;Parent=g6886.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 949 3147 . + 0 ID=cds.g6886.t1;Parent=g6886.t1 #PROT g6886.t1 g6886 MSSVDSDCEEVEDAFENDVVAASFSDMLLDDERNVKYARAIERAVRFLKSPENVNTRESTCGTVDRNKGEAVSELPQTEKVGVSVLDIGTGTGLLAMIAARAGARHVTACEMSLETAAIAVKVVEGNGLSDVVTVVRKRSDALTVAQSEGDRHGSVSTTGGNSVDMPGKVDLIVMEVFDTDLIGEGVLPTMRDALRRLARPGAMVVPGGARMYGQLVSSPHLATWQRLSASASASASASLHAFDMRPKEGCVGSGFLHSAQLDAYSAAGLIKPLSPPICLFEFDFRRPCDAKHAAKYVKADVECDGVAHAVVVWWDLLLDDTETISTRPEWIAFGFGVDAPQWRDHWTQAVAVLPTPLELSVGASVTLGAFHDDYNVWVTAEKDVGVPEVTLTVTPPYCFCGAHGLWSRHRIAALCDEPRSATFQRALKDTLQKRLQADSASSFSTSPDRARGDVTVEKTHIVCVGSGPWLAMSAARASDDDVVVVAYEEERLSREISERIVSRNGMALSVAVVGGEDWPRHASGGAVAASAILCEPSFDGSLLPWDDMLHAWKTAARLVADGHVRRRAEGIGEIPLVFPARARVRCAAVQLDHLHKSVADIREAVGFDLGAFNTLRTRAKEHVTAYPMGEYSHSLLSGIEDVCDIDERVVVTESDDDGNEGGALAYLGKCVLSVSSVGKCHGILAWVDYDLCEGVALRHKPRPWGDKFGLDDADCPMYARHAVVFLHGDDFGASVVPGDRLLVSVSASAEQGVLCIELSLVRTE* # ORIGINAL: g6887.t1 original gene structure, not modified by PASA NODE_822_length_17294_cov_38.7275 AUGUSTUS gene 3481 5575 . - . ID=g6887;Name=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS mRNA 3481 5575 . - . ID=g6887.t1;Parent=g6887;Name=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 5515 5575 . - . ID=g6887.t1.exon1;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 5515 5575 . - 0 ID=cds.g6887.t1;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 4700 5352 . - . ID=g6887.t1.exon2;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 4700 5352 . - 2 ID=cds.g6887.t1;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 4163 4321 . - . ID=g6887.t1.exon3;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 4163 4321 . - 0 ID=cds.g6887.t1;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS exon 3481 3930 . - . ID=g6887.t1.exon4;Parent=g6887.t1 NODE_822_length_17294_cov_38.7275 AUGUSTUS CDS 3481 3930 . - 0 ID=cds.g6887.t1;Parent=g6887.t1 #PROT g6887.t1 g6887 MLRNTRALWPLRRYMSYAPPSFKRALATATGDAGIVAPPKESLLLKALGKDSPSTDAKVLSIKAKSRVAQTRKKSIAEIDAIDADHNRGSRIFRNDAAGKDSSPTPKTRRVKGSAVSSPASVEPAHTNVVTTSAVQPRKNSTNSEGNVHTHVEATPTPVGVVAKKAKRKKGVAAVEVPVTVSCDAGAGGDAFDRAEGLGAEQTPGDDSGAGSGTLIVRGKKKAARKTAAKSVDGKMNETMPIHNAIISVDVGAKNLAWAHVTRAGCIHEWRLVDLDLPPIFSPNAYASKLKTFVDSLPPMFPVAIERQRHRSGGVSSVLEHVFRVNIVEAMLHALLQERAFSVLPRLTQSIFSLGNSPVKKKNAIVVCDRILANSGHFSSRKRRTAATAPATDPPPAATDIVTLPEHLFAMYETSKKRDDLSDCLLQALAYFKATPPPLH* # PASA_UPDATE: g6888.t1, single gene model update, valid-1, status:[pasa:asmbl_9552,status:12], valid-1 NODE_822_length_17294_cov_38.7275 . gene 6353 14961 . + . ID=g6888;Name=g6888.t1 NODE_822_length_17294_cov_38.7275 . mRNA 6353 14961 . + . ID=g6888.t1;Parent=g6888;Name=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 6353 6544 . + . ID=g6888.t1.exon1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 6353 6544 . + 0 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 6786 7096 . + . ID=g6888.t1.exon2;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 6786 7096 . + 0 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 7562 13274 . + . ID=g6888.t1.exon3;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 7562 13274 . + 1 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 13428 13511 . + . ID=g6888.t1.exon4;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 13428 13511 . + 0 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 13745 13890 . + . ID=g6888.t1.exon5;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 13745 13890 . + 0 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 14182 14302 . + . ID=g6888.t1.exon6;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 14182 14302 . + 1 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . exon 14525 14961 . + . ID=g6888.t1.exon7;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . CDS 14525 14869 . + 0 ID=cds.g6888.t1;Parent=g6888.t1 NODE_822_length_17294_cov_38.7275 . three_prime_UTR 14870 14961 . + . ID=g6888.t1.utr3p1;Parent=g6888.t1 #PROT g6888.t1 g6888 MDPLDEEVDERTRKDPKFKQYVSAIEKTLRAFDASREWADLISFLGRLNKVLLTFPQFPQVPKKLTLTKRLAQCLNPALPSGVHAKALESYDLLLSRIGPDGLARDIHLYSVGLFPLFYHCAMQVKTPLLAIYEKYFLKLGKDLLPSLKGFLLAIFPGLEEGSEHVERTVTILESLCRIVEPIPFYTVTWRCIESSSAARLPALTYILTHLNPKRQLTDQPLFAVGDTPSMITAIAAAMNDRNVLVQRNALEFVVTYLPANTSLLSFDEKVVMLRAALATMLRRDMSLNRRLYLWLTGPRASEDESAGSASSRDDPSVHAYFNTHARSALSAAIRMELAMPSTSDRTVYLRPYRILMSLLDKPQIGADAADDVVVDALESLRHHAAGGSGGNGTAGAYYDELLKTATILFNMLEPARVWGVLCRLVTGLPPARFAREDVVDNGDRDAMSVDSDQQTLGRRHHTLTTPQGAFRAISFALELLAGDATTASTHGAQLPALLRALLGWLHAAEQRSVHMHIVNGASSVSEDTASAESATTPFGRPVFAMADMDAVRLDAVASCLTLVCRVIARIAHFAKTEEDYLETGRHLTSSFSSSSIPNDSAEDDELPAETRDTHPAVALLECRSLAQTLYSDFAFRWLQPPHEVEEHGPDNNPYPRFASGRRKSVVRLDSEATDGRCDSIHTLLCRVLVDLSRLPLYEEVAPVGTEASGVDVGVAPTDSNGGADFGGNRHLPEWVVALVGCARKSRFQVARAATETLLDLLWSSAAAYEEDERERTRLYCPPSFVRVTGVHRVQMLPMWCVRRLALRSEFYPSTTLRLWDFLSVGGSQSPEEMTAAVSLLWRLHASCPTPACEDVLASLMARANPEIAGRIEAHRRYALMSQLVPRQIRAQQPSQRRFTRLSLAMLDGLSDPSPRLQMVARAWLADAVREIGRVGDVLVELLCEGLPSHVTAGAAGDSAQPPPSVSNLSFSSTAASLFPPASLSASTTVRGAHGSLAPEGAIADRPRAAYALRSLLAVLRAEPDAVIPALATQDMRSEDALEALRAFDESADEHMTPPSSVPASPAPRASVFAGPPPSPSHAGGRNKSAGNNKNVSYLHFLTRLLLRYLCRPPNPAADAIDGMSVLAADALSELVGGLRKGTGVRSGVGVGGATGGFHGGSAVFGLVRLVRDSVLRRLHAAVLSGEMELQVSLLRLLRIAIAIGDTPSAADDHHQQQHQHNHHGHHGGGSSSAGDKGAGTTATGGERGGSGMPSASASGGAHSLAPSAFPSIVTVASMPAFLDSIHRALLDPGLRPIHAHWLRFVIGCMPHLRSSLHHVVSAVILYSCEALHAYLQPKGAAHLVEASVPIARSVGGAFSPLDSSSSNPASALVGDWPDGSPSYLLSVVDCLVSITRHCLFGRAGTHVGTSAASGIVAGQALDAIGASSAAKGSSSSSSLRSGGWTDFINFFGGESGGPVGTTPIEEARVSVLSSLPRILGSLLAAWVSDIDSASVAGLDPRAATGSSAFPSGAQHHTLGGPLLQRHGIHKSAWREPVAKAMRRLLSPIADAYPLEFASALLAAWAEGAAAGASVANGGIGANSGTLVFGAGNSPVQIPTVRQTALIDMVAVLRLLPGDEFVRAMGRVLPLARDKSRLPPPGVSFGGLQETTVFHALSWHYILGFSAEQQQQASPSVVQLIKEGMTSSHPPTILLLVFLSDACARATVARASEDLAPSSGGSGGGALSNVGSSASANGTLSSTTTGQGSLSVGSSAASGSLASGGQQGLNSVSVSSTSGGQLGSSSGGGSGGSNANSAAKKTKKELQDAAQRLCEMCAAIAATGACPASSYWSRATRPNAADALSPRGALGPDTSAADGEGHVGDVVLGSMNAGAAQSGSGGVFAVSSLCVMSHVLAPLLDLVFGGDDKEKVATLLAGVMYAIAAHLKPRGERVGPVWSACTDLVLSMCEFPYALRAWKREAMECLLDPSFFATDSVELKKWRRIIDDLMTYDRASFPDLMSRTVAVQGTALTGLFVGARDSESAQRGAMLKRLAFVLLAGSKDQYLRYLPTIQERLVEGFRCVDAGGLHVQVFLCLRVLVLKLSQQHLTAMWPMVITELVRVFGTAIANKAADDGGRARLSPSDLPLLLEACKFVELCLILRLEQFNMHQWAFIDETGFSEIGAFPPVNCAFMPLIDQLSGLEQMHRTTASRVSSEAPGGGSILSLPSISSLYDLRFFFRHVAGGSLDRATESSAAGPDLALLTSLLEADFIECERAPPSPNGQSQVQQNDGPMGDHVRDSGATVEGFDDAIYGTDVDRFVR* # PASA_UPDATE: g6889.t1, single gene model update, valid-1, status:[pasa:asmbl_9553,status:12], valid-1 NODE_822_length_17294_cov_38.7275 . gene 15374 17284 . - . ID=g6889;Name=g6889.t1 NODE_822_length_17294_cov_38.7275 . mRNA 15374 17284 . - . ID=g6889.t1;Parent=g6889;Name=g6889.t1 NODE_822_length_17294_cov_38.7275 . five_prime_UTR 17234 17284 . - . ID=g6889.t1.utr5p1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . exon 17221 17284 . - . ID=g6889.t1.exon1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . CDS 17221 17233 . - 0 ID=cds.g6889.t1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . exon 16755 16915 . - . ID=g6889.t1.exon2;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . CDS 16755 16915 . - 2 ID=cds.g6889.t1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . exon 16515 16631 . - . ID=g6889.t1.exon3;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . CDS 16515 16631 . - 0 ID=cds.g6889.t1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . exon 16126 16330 . - . ID=g6889.t1.exon4;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . CDS 16126 16330 . - 0 ID=cds.g6889.t1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . exon 15374 15882 . - . ID=g6889.t1.exon5;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . CDS 15752 15882 . - 2 ID=cds.g6889.t1;Parent=g6889.t1 NODE_822_length_17294_cov_38.7275 . three_prime_UTR 15374 15751 . - . ID=g6889.t1.utr3p1;Parent=g6889.t1 #PROT g6889.t1 g6889 MDVEDGPDHFFVINIQSDECAFGVDVGDLVLVDDRGFKVPSILKSLRECFVQCGGLKEPGVFRNPGDETEVKALKRALNSGSFTGSRDANSLATVIKVWFRDLPRQVLCDLPNSALSSESDTQDKAVAAYNRIGETNRGILTWLLDLLAEVAQHESSNQMNAHKLSIAITPNLFAMPTDIPPQESLRLSQGVVTFFMHLIQHQKALRS* # PASA_UPDATE: g9283.t1, single gene model update, valid-1, status:[pasa:asmbl_241,status:12], valid-1 NODE_1066_length_14259_cov_43.1315 . gene 2508 7719 . + . ID=g9283;Name=g9283.t1 NODE_1066_length_14259_cov_43.1315 . mRNA 2508 7719 . + . ID=g9283.t1;Parent=g9283;Name=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 2508 2651 . + . ID=g9283.t1.exon1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 2508 2651 . + 0 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 2959 3739 . + . ID=g9283.t1.exon2;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 2959 3739 . + 0 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 4000 4336 . + . ID=g9283.t1.exon3;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 4000 4336 . + 2 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 4645 5067 . + . ID=g9283.t1.exon4;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 4645 5067 . + 1 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 5281 6327 . + . ID=g9283.t1.exon5;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 5281 6327 . + 1 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 6603 6769 . + . ID=g9283.t1.exon6;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 6603 6769 . + 1 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 6969 7048 . + . ID=g9283.t1.exon7;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 6969 7048 . + 2 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . exon 7356 7719 . + . ID=g9283.t1.exon8;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . CDS 7356 7691 . + 0 ID=cds.g9283.t1;Parent=g9283.t1 NODE_1066_length_14259_cov_43.1315 . three_prime_UTR 7692 7719 . + . ID=g9283.t1.utr3p1;Parent=g9283.t1 #PROT g9283.t1 g9283 MSFGGYDGGKVQKAAFVEKTKAERLERANERAEKDALVKKTAAAVKIQARVRRFLSLRRVHSLWRAEFDAKFAFSEVNADAETRQNGSQPPATPEVAALPLRSSAHDAFVTTGRLLAFYRPKRDGQRLVLLLRWLLIEMDPSAKVSTGTAAYVSLSFHKTLASTWLRQLKSLTLRAITTAMAISRVQGREASRTLGVLLRAVVTYTDAQPWVAAMKLADSARQPLSKLCGAVLGHLVASNMFGMVGDFLGRTVAIPTPVVDKPTLAAILVVCGRALVSRALKPDAMALFMVGVLQTPALIHHATIMCPDVVNSFDSLGISAACFDTLAQDQTLRILFNALEGNYMLCLIGNLAQLWLNGLSKAGKSGTGNAKDGDLEAVSRRVSIVVCLFERCHSYVAKKATNLTTFHPIFGWFSGSTIRSLHEVFPLVLQQIQLLWSRDAVALLYVDALGPLCDAGTRLKTGTSKEDMQQRSKAVTSAALRVRLASRLYRVVSATLPNHRQEVVNAVAYHPDLLPRLWRFLYMLGPNGEMKIFLETATRPGKEPLIDILVLFCECCTHLMLILGDDELYDKQSPFSLAEVVSLAKFLNELVFRIIWLGPPVGKLAGETTVHPAATAVDVSRTSLEDPDAALHAALLKSSRKLLSLLCDRDSRRPFMPSPASWLLKELTTSSLASHKDRAESALAYLPHAIAFKDRVAIFRENVARDKELVASALGNAPAPMATVRRGHVLEDGYRQFGRLATTSWKGTVRVRFVNEQGLDEVGIDQHGVFKEFLEQTIARAFDPGLGLFTSTPETRQLYPNPQSAVQDDHLQLFEFVGRVLGKALYEGIVVDVQFARFFLSKLLGRQTHFDELPSLDPTLYKNLVFVKSYEGDVEDLGLTFSVDEETFGKVQSVELRPGGRAVSVTNENRILYVYLMADYRLNRQLRAQSDAFVRGFRSVVAGSWLRFFSASELQTLVSGDSGDFDVADLRAHVVYYGGYHDRHQVIRWLWDILGDFSPAERASFLKFVTSCSRPPLLGFKHLQPPFSIRVVEDGERENDQGMPTFGGAIRAFFNVGTGPETERLPTASTCFNLLKLPLYKKKKTLREKLKYSISANAGFELS* # ORIGINAL: g9285.t1 original gene structure, not modified by PASA NODE_1066_length_14259_cov_43.1315 AUGUSTUS gene 11823 13514 . - . ID=g9285;Name=g9285.t1 NODE_1066_length_14259_cov_43.1315 AUGUSTUS mRNA 11823 13514 . - . ID=g9285.t1;Parent=g9285;Name=g9285.t1 NODE_1066_length_14259_cov_43.1315 AUGUSTUS exon 11823 13514 . - . ID=g9285.t1.exon1;Parent=g9285.t1 NODE_1066_length_14259_cov_43.1315 AUGUSTUS CDS 11823 13514 . - 0 ID=cds.g9285.t1;Parent=g9285.t1 #PROT g9285.t1 g9285 MGKDGGMAADIGGKKKHIGNATLMSASSANPEDELDNLKRRFALLEGDRKAYYENSQWTIKSNRDEVAALRAANKDLRQRISKVTKGDMRGSDDPASYSNDPIGKLEYKVNNLRKRSDELSSVITSKEDELEQLEDKLHDLEKEEQSLKRSEEESPHMTRIRSLENRLEKALIKYNEAQSIRKTYESIQQRLQEERLTYDNQLAMLEAAIRAKAKELEALQVVSRDAQHAKEVTRFELHNFEAFLSEERKARERELKERKEMVRSVLESTEKMEKRQQRMQVLEGEEEGAAGSAVKQPDEEQEKKLTTYEEAFRKIKEATGISEVTEVLDKFSTQGDTQMHLAKLQEDNEVAIVRLTEEKSALQAQLNELKYSGEVQSGGRQLVDELDKRVRDSTERRDKKGESVLRVSRVIVNAKSGVQHLANKIGQVEGEQAMPTVTEDNMGDALALIETRLIKILAKIDEKEGQMQIDPARHPPPAIAMPEHNVRIKLPDRLLETTGATAELLFSSSDDDAVGEDELQDRDAMKKQAFQIVHHHQDKRRKGKKPKRQPGGGAPPAKAPAK* # PASA_UPDATE: g9284.t1, single gene model update, valid-1, status:[pasa:asmbl_244,status:12], valid-1 NODE_1066_length_14259_cov_43.1315 . gene 8258 11240 . - . ID=g9284;Name=g9284.t1 NODE_1066_length_14259_cov_43.1315 . mRNA 8258 11240 . - . ID=g9284.t1;Parent=g9284;Name=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 11072 11240 . - . ID=g9284.t1.exon1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 11072 11240 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 10748 10959 . - . ID=g9284.t1.exon2;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 10748 10959 . - 2 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 10565 10622 . - . ID=g9284.t1.exon3;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 10565 10622 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 10195 10284 . - . ID=g9284.t1.exon4;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 10195 10284 . - 2 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 9893 9984 . - . ID=g9284.t1.exon5;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 9893 9984 . - 2 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 9644 9697 . - . ID=g9284.t1.exon6;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 9644 9697 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 9357 9503 . - . ID=g9284.t1.exon7;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 9357 9503 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 9000 9193 . - . ID=g9284.t1.exon8;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 9000 9193 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 8695 8836 . - . ID=g9284.t1.exon9;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 8695 8836 . - 1 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . exon 8258 8475 . - . ID=g9284.t1.exon10;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . CDS 8356 8475 . - 0 ID=cds.g9284.t1;Parent=g9284.t1 NODE_1066_length_14259_cov_43.1315 . three_prime_UTR 8258 8355 . - . ID=g9284.t1.utr3p1;Parent=g9284.t1 #PROT g9284.t1 g9284 MANTNEAVVAATAAVDALYSLRDHFFEGRDVSQASKKSSIIAAELKKVLDTVNPLVEANRSSPLLSYQRGRALNVLPTYDQEAEDALSRSVKLDPKFVDAWNALGECFWKKRDLDGAKNCFTGALNQSNNKVSLRNLSMVYRQLGASEEERLKNIAESVALAKKAVALDVRDGTSWYVLGNAHLSLFFSGAQDTMDLKSAISAYKQAENDPASKSNPDLHYNRAVVMKYLEDFKGALEGFALAAAFDPAWNEPIVQAQHIHDYLAKIADLVEKRGRIKNKKLSALSKTVQAALDQAGKTRPQLTFPSSHLRALAEGKNGGKSVLLHVVAAVPKDDPIPQVFLAVDSEQQFVAITIYNMGSGVLKASDLLEIPEPLARYVLLTQKEKTYRYLSIRVENPAHLRVNGSQLDTSAVARSVLAVVNKSD* # PASA_UPDATE: g9282.t1, single gene model update, valid-1, status:[pasa:asmbl_243,status:12], valid-1 NODE_1066_length_14259_cov_43.1315 . gene 162 1910 . - . ID=g9282;Name=g9282.t1 NODE_1066_length_14259_cov_43.1315 . mRNA 162 1910 . - . ID=g9282.t1;Parent=g9282;Name=g9282.t1 NODE_1066_length_14259_cov_43.1315 . five_prime_UTR 1833 1910 . - . ID=g9282.t1.utr5p1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 1707 1910 . - . ID=g9282.t1.exon1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 1707 1832 . - 0 ID=cds.g9282.t1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 1514 1575 . - . ID=g9282.t1.exon2;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 1514 1575 . - 0 ID=cds.g9282.t1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 1313 1399 . - . ID=g9282.t1.exon3;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 1313 1399 . - 1 ID=cds.g9282.t1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 981 1027 . - . ID=g9282.t1.exon4;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 981 1027 . - 1 ID=cds.g9282.t1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 555 771 . - . ID=g9282.t1.exon5;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 555 771 . - 2 ID=cds.g9282.t1;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . exon 162 294 . - . ID=g9282.t1.exon6;Parent=g9282.t1 NODE_1066_length_14259_cov_43.1315 . CDS 162 294 . - 1 ID=cds.g9282.t1;Parent=g9282.t1;3_prime_partial=true #PROT g9282.t1 g9282 MSLANMDWTALIAYPAMVGVVFGGILPYIPQYKQIKASRQWQGFSTMVCFVLLIANILRIFFWYYKQFETPLMLQSVFMIIAQTFMLDLCIRLRREGEVLSKRRTLADLNFDEFWRWSYLADYAVFLVIFSGIVAFLCTFCGTHPNFVEGLGLVSVLVEATLGLPQWYRNQMSKSTEGMSTSMVLGWLAGDILKTIYFIARAAPFQFVLCGCVQIVVDIAIMYQ # PASA_UPDATE: g8718.t1, single gene model update, valid-1, status:[pasa:asmbl_3486,status:3], valid-1 NODE_2094_length_7761_cov_39.9175 . gene 6048 7505 . - . ID=g8718;Name=g8718.t1 NODE_2094_length_7761_cov_39.9175 . mRNA 6048 7505 . - . ID=g8718.t1;Parent=g8718;Name=g8718.t1 NODE_2094_length_7761_cov_39.9175 . five_prime_UTR 7468 7505 . - . ID=g8718.t1.utr5p1;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . exon 7075 7505 . - . ID=g8718.t1.exon1;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . CDS 7075 7467 . - 0 ID=cds.g8718.t1;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . exon 6611 6897 . - . ID=g8718.t1.exon2;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . CDS 6611 6897 . - 0 ID=cds.g8718.t1;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . exon 6048 6275 . - . ID=g8718.t1.exon3;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . CDS 6164 6275 . - 1 ID=cds.g8718.t1;Parent=g8718.t1 NODE_2094_length_7761_cov_39.9175 . three_prime_UTR 6048 6163 . - . ID=g8718.t1.utr3p1;Parent=g8718.t1 #PROT g8718.t1 g8718 MEQLQSASQNRVAQLTRHVTSLEERLVHQTTECSRTSGRFLAVASAVRRLAEKVCADVLATQERVKAASLRAPDAHLSSRDRAPPRDHVPTRTRVEDENGRRTVNRTPLSELPTSSIDEQAWTAAVDISRSILDMTQSDFGSIIDLLPRGESAPLGHTSHQPQQQQSAVTDAHTKRPTHSQSDNARHATDGMDGGKRRVHVPGEAPRRKQIAVRFDAAAFLERLDTMLLNSSDIAVPSIVDLMADLVNIRSSLASLAVRTAAE* # PASA_UPDATE: g8716.t1, single gene model update, valid-1, status:[pasa:asmbl_3485,status:12], valid-1 NODE_2094_length_7761_cov_39.9175 . gene 71 1549 . + . ID=g8716;Name=g8716.t1 NODE_2094_length_7761_cov_39.9175 . mRNA 71 1549 . + . ID=g8716.t1;Parent=g8716;Name=g8716.t1 NODE_2094_length_7761_cov_39.9175 . exon 71 312 . + . ID=g8716.t1.exon1;Parent=g8716.t1 NODE_2094_length_7761_cov_39.9175 . CDS 71 312 . + 0 ID=cds.g8716.t1;Parent=g8716.t1;5_prime_partial=true NODE_2094_length_7761_cov_39.9175 . exon 478 1549 . + . ID=g8716.t1.exon2;Parent=g8716.t1 NODE_2094_length_7761_cov_39.9175 . CDS 478 1531 . + 1 ID=cds.g8716.t1;Parent=g8716.t1 NODE_2094_length_7761_cov_39.9175 . three_prime_UTR 1532 1549 . + . ID=g8716.t1.utr3p1;Parent=g8716.t1 #PROT g8716.t1 g8716 VKYHRLVSMWLAVPIALHAAKEDVVPDFNVDNTHLLGTLAGLSYIFVFITSLEFVRRRFFEAFYFSHLFVFVFIVLSCVHQNICAVAFAPGLLQYMVDRIIRRIRSRKVYTATIEKVGDDAVRIVIPNGRDGPCGSGFQPAQFAFVRVPSISAVEWHPFTIACTPFDAEIRFIVKSHGDDTWTGRLLQAACSQDNVHVAAVARGPQDVKRSAVAKVEIPMNVEGPYGNLSLRLCDHDAVVMFAGGSGITPMIANLRHLHRLASCGEGARGRLRHVVLCWSVRGESSLEWIKGDLDGIVGSTVAGTRFEGRLFDTSALAESGDDDVELANKKTKTGWGDEGIVPSFAARCIRTRGRCNVRQVLGEFNGVTRTTASAGDARSGCDGGGDSYGRVAVLVCGPGGMVADVQWTATTMSSWGRGTTYYVHKGTFAL* # ORIGINAL: g8717.t1 original gene structure, not modified by PASA NODE_2094_length_7761_cov_39.9175 AUGUSTUS gene 3329 5538 . + . ID=g8717;Name=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS mRNA 3329 5538 . + . ID=g8717.t1;Parent=g8717;Name=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS exon 3329 3667 . + . ID=g8717.t1.exon1;Parent=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS CDS 3329 3667 . + 0 ID=cds.g8717.t1;Parent=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS exon 4108 4212 . + . ID=g8717.t1.exon2;Parent=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS CDS 4108 4212 . + 0 ID=cds.g8717.t1;Parent=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS exon 4705 5538 . + . ID=g8717.t1.exon3;Parent=g8717.t1 NODE_2094_length_7761_cov_39.9175 AUGUSTUS CDS 4705 5538 . + 0 ID=cds.g8717.t1;Parent=g8717.t1 #PROT g8717.t1 g8717 MSAYVEEDQPAAAWYGVLLNGISIGVDLMNLVLIQRTFTLNHFRVRRSDLPACFGGGHRASKVTPLHDPAVHVTLHHTNSNGPRSSSFGSHVTFPENYLAAVLWLLLASVVLWLVGVFDDTLAGSTSTFEDKPEFKAFLCHANYGFSETLYTTALFITMYRVIRPRKLWIVIGWVAVSLGHLISFVTYVVSTMSETEQFSEDVTYEQGDHVWISTLVYLSVLDALFAFFLIVDYLKHFHGEVEGFRKKIRAVASSEYAFLGVECGISIFYIVLESLKASLDETTFDNAGNVVVGLRHYLAMCFISYLVNDVPPMPEHLVTHRSGNGSLMGAKAGLGASRSIMCLRDPGHGGGDHDHDRLSVSSGKGDGLSSSSRGNEMLPSIREPGSDYNHRPSVSFQGDVEIANLSDAELPQPGVEEMTVSLDV* # PASA_UPDATE: g13827.t1, single gene model update, valid-1, status:[pasa:asmbl_4548,status:3], valid-1 NODE_2555_length_5911_cov_40.4858 . gene 97 2305 . + . ID=g13827;Name=g13827.t1 NODE_2555_length_5911_cov_40.4858 . mRNA 97 2305 . + . ID=g13827.t1;Parent=g13827;Name=g13827.t1 NODE_2555_length_5911_cov_40.4858 . five_prime_UTR 97 311 . + . ID=g13827.t1.utr5p1;Parent=g13827.t1 NODE_2555_length_5911_cov_40.4858 . exon 97 696 . + . ID=g13827.t1.exon1;Parent=g13827.t1 NODE_2555_length_5911_cov_40.4858 . CDS 312 696 . + 0 ID=cds.g13827.t1;Parent=g13827.t1 NODE_2555_length_5911_cov_40.4858 . exon 953 2305 . + . ID=g13827.t1.exon2;Parent=g13827.t1 NODE_2555_length_5911_cov_40.4858 . CDS 953 2103 . + 2 ID=cds.g13827.t1;Parent=g13827.t1 NODE_2555_length_5911_cov_40.4858 . three_prime_UTR 2104 2305 . + . ID=g13827.t1.utr3p1;Parent=g13827.t1 #PROT g13827.t1 g13827 MNKNSAGNPVCGLMFLNPVTQQKYLGDGVVLPPNVTVEVRLSIFNNGTYKVAVALNGSANDAASFSIINFRLPSSFRFSLIVGRGRYNQSLCATNFIVRSNGSALHESNTFSPNIWVSPRSAALPVFMYDKPYFTSPSNRVCGDAYTAVILAQPFQQSNNPVLNTTLSFSFDDLSTFVAGITLFNSDRTVTVTFGCGQTQINSTTVSPYCAISAADAKTNFVFPFSSVSARLNATILALYDTNNGRAKIWLYSGDLLVGWVETFTKIAPVYAGFQVGDVTDKKFTCATRFSSTWAVATGTIGVPSSGVPPPPASSGIPPAPASSGIPPFNPSSGVPPPPASSGIPPFNPSSGVPPAPASSGIPPFNPSSGVPPAPSSSGVPRPANASGSPPPPLASTSPLGPSASPTSPRACIGGVLTLVDTTTDRTIVCERTTLTTVAGKASISCLASKDGGVSFEVIDTLNEDSPTAALTTSFTSTGNRQYGVSLRGLHVRDPGTNAFVLRAVWDCACL* # ORIGINAL: g13828.t1 original gene structure, not modified by PASA # ORIGINAL: g13828.t2 original gene structure, not modified by PASA NODE_2555_length_5911_cov_40.4858 AUGUSTUS gene 2749 4979 . + . ID=g13828;Name=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS mRNA 2749 4979 . + . ID=g13828.t1;Parent=g13828;Name=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 2749 3152 . + . ID=g13828.t1.exon1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 2749 3152 . + 0 ID=cds.g13828.t1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 3397 3481 . + . ID=g13828.t1.exon2;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 3397 3481 . + 1 ID=cds.g13828.t1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 3732 4219 . + . ID=g13828.t1.exon3;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 3732 4219 . + 0 ID=cds.g13828.t1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 4474 4548 . + . ID=g13828.t1.exon4;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 4474 4548 . + 1 ID=cds.g13828.t1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 4862 4979 . + . ID=g13828.t1.exon5;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 4862 4979 . + 1 ID=cds.g13828.t1;Parent=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS mRNA 2749 3811 . + . ID=g13828.t2;Parent=g13828;Name=g13828.t1 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 2749 3152 . + . ID=g13828.t2.exon1;Parent=g13828.t2 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 2749 3152 . + 0 ID=cds.g13828.t2;Parent=g13828.t2 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 3397 3481 . + . ID=g13828.t2.exon2;Parent=g13828.t2 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 3397 3481 . + 1 ID=cds.g13828.t2;Parent=g13828.t2 NODE_2555_length_5911_cov_40.4858 AUGUSTUS exon 3732 3811 . + . ID=g13828.t2.exon3;Parent=g13828.t2 NODE_2555_length_5911_cov_40.4858 AUGUSTUS CDS 3732 3811 . + 0 ID=cds.g13828.t2;Parent=g13828.t2 #PROT g13828.t1 g13828 MPGFPSDDDAGASNADSDGEDAHSADDVSIDGSAASSVRSFVRDSLSPAQDPFESVPNTPTGVPAHVSQSGLGFEFDKDGRDAWDVGGAHDSVRVTNWEVREYKTLVRSVVAAILEDGGDRSWADIATGCQGFANKTAYVGFDGDDVDDEFEPSNFVDGILVRPHDNDSSSSSSVDTDGTLSQSFVVPSRVPADLFSLWNAASATDTDIDAPFKLRRRRRRNSRCKNSDEEMHEETDTSYALDAIESGALSEEMDRTVGALWKDAHPGGAGMHGRRGRGRGSKKRSDVVGMDEHIRRCLNHEGTNALRRLVKATLRLRSHPEGFVRPRGGSTAGGVETALHAAQLAGLSPTVIDRARIRLERMFGDDAVDGGHVRKRKRTEDNGTPPPD* #PROT g13828.t2 g13828 MPGFPSDDDAGASNADSDGEDAHSADDVSIDGSAASSVRSFVRDSLSPAQDPFESVPNTPTGVPAHVSQSGLGFEFDKDGRDAWDVGGAHDSVRVTNWEVREYKTLVRSVVAAILEDGGDRSWADIATGCQGFANKTAYVGFDGDDVDDEFEPSNFVDGILVRPHDNDSSSSSSVDTDGTLSQSFVVPS # PASA_UPDATE: g7697.t1, single gene model update, valid-1, status:[pasa:asmbl_4655,status:12], valid-1 NODE_2611_length_5669_cov_46.1988 . gene 1 4294 . - . ID=g7697;Name=g7697.t1 NODE_2611_length_5669_cov_46.1988 . mRNA 1 4294 . - . ID=g7697.t1;Parent=g7697;Name=g7697.t1 NODE_2611_length_5669_cov_46.1988 . exon 1053 4294 . - . ID=g7697.t1.exon1;Parent=g7697.t1 NODE_2611_length_5669_cov_46.1988 . CDS 1053 4294 . - 0 ID=cds.g7697.t1;Parent=g7697.t1 NODE_2611_length_5669_cov_46.1988 . exon 1 916 . - . ID=g7697.t1.exon2;Parent=g7697.t1 NODE_2611_length_5669_cov_46.1988 . CDS 1 916 . - 1 ID=cds.g7697.t1;Parent=g7697.t1;3_prime_partial=true #PROT g7697.t1 g7697 MAWRAPPPLQAEQQWQSYFQPPHVPGADPADPSGAQSQANPFAQYFTTNAPNAPNAPPVTNAAPQRSAFSPYAPSPGAAEPPTRGDDASTRSFVPINDSHGDADGYRPATSAPVSYFADGETPVDAAPVSVPSVGWMADPASHPSSSYPAQHSHASPHVEANASSYEGGWPSQKYIPKNDAHAPPHVEHASSYEGAWPSLEDVAQNDAHAPPNVEHASNYEGEWPSQEHIPQSDAHTPPHVEAHASGYEGGWPSQELIPQNDDHAPPHVQEYASGYDGGWPSEERIPQNDAHAPPHVQALASSYEGARPSQENSLEGTPNLQAAVMSDELGWQAPHINHAPIGEYMLAARADSVSPDAAADGQRGAIGSTNFAALTDDATTPPNYTRLVDRDDHAGLLRNNGGVPPCIAPSSTASHHVGSVAGVEGDSDNQVICSLTASLRGEDSGHTHSGRSDYPTVDASSVRTSSREGVLLVEGGAPENIRVPSTLPMIRHSDATTAQDLPAEAGWAEDTHPPTHHALAKSGHLAVDDDTIVAFVKSSGATSYMGSRAVDNAPWDSTRVDAGNTAVLPTLSPPMESDGRMLKSTNSQDAGVLSTGSESPSPTPEGRAVGRERAAIAAASAANLWVVDDRTHVTGGSPAFGAPAAQSPIHRRNWSRDGRPLCASVSFGFGGRLVVCRRSAVDRDSPHSRDPAKVEILPVGRLIEHTDFYRSLSLHPGPLSREQPKQRIMQRLHELMTDVSPLGSFGTDDGAALLLGILAVFVKHGGVFGVGSRSARHGASDAASDIVTFVLEEHAQMGAFDDEVQPTSAMAVPGAFRQTDAARAACVAEVERLLVRGKKAEAVAAAVRGCIWDHAILIASHVDTATYSDVVAKFAQATLSRGAPLRALYEVLSGASQPLADSDALGHGGEGVAGTNVDPIANGADNGRDPVCLRWRENLAVLVSNRARGDAAAIVALGDRLRATGRIFAAHCCYLAADAPVATMDAPIHVVGADIPTCSSSTFRRAALDPLAFQRTEFYEYAKGLGDSVFVLPGFQGAKVAYAMLLADVGLVGESTRYLDAVAATVKTASSKICASYFHRFLLDQLGEASHRLRGRNSSGASWWKKGLSTLMETFLSSADPEPEPEPEPEPPYAVAAPPISSQVTPSTSHAGDVSYADSVAYNYGAYNGGSDEAVYASYGTIDGADPYSQFDGQTEAPSEYAAEAYNYGEYDGYAESEFSNCGQGGVFGVGEGEVTGRYRGQPLATSDPVAYNYDEYDDAYAKQGSTYGDDANGADSGDYGQQPPAYNYDAYVAYDAYGRADYPTATDGGAAVQDEYIEQPDPTAYNYDAYDSYGRPGVSNYETDAGNGSSENVDYAAQPPAASDYYGERRGTSQPRMNGRGDAT # ORIGINAL: g7698.t1 original gene structure, not modified by PASA NODE_2611_length_5669_cov_46.1988 AUGUSTUS gene 4827 5430 . + . ID=g7698;Name=g7698.t1 NODE_2611_length_5669_cov_46.1988 AUGUSTUS mRNA 4827 5430 . + . ID=g7698.t1;Parent=g7698;Name=g7698.t1 NODE_2611_length_5669_cov_46.1988 AUGUSTUS exon 4827 4974 . + . ID=g7698.t1.exon1;Parent=g7698.t1 NODE_2611_length_5669_cov_46.1988 AUGUSTUS CDS 4827 4974 . + 0 ID=cds.g7698.t1;Parent=g7698.t1 NODE_2611_length_5669_cov_46.1988 AUGUSTUS exon 5162 5430 . + . ID=g7698.t1.exon2;Parent=g7698.t1 NODE_2611_length_5669_cov_46.1988 AUGUSTUS CDS 5162 5430 . + 2 ID=cds.g7698.t1;Parent=g7698.t1 #PROT g7698.t1 g7698 MNGANSGGAAGQLNGDAPPTGAGTSSATPGLRNRISAVVEKVQPVVPSVGNVARDHLANERTFLAWLRTCLSLVGGGAALTKLGIAWIGNSFVVLGLFALVLSTYQYYHITHLLERVSAHLFPAQPRQVPVACAYVLW* # PASA_UPDATE: g12194.t1, single gene model update, valid-1, status:[pasa:asmbl_5251,status:12], valid-1 NODE_2929_length_4717_cov_37.1822 . gene 412 4711 . + . ID=g12194;Name=g12194.t1 NODE_2929_length_4717_cov_37.1822 . mRNA 412 4711 . + . ID=g12194.t1;Parent=g12194;Name=g12194.t1 NODE_2929_length_4717_cov_37.1822 . five_prime_UTR 412 487 . + . ID=g12194.t1.utr5p1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . five_prime_UTR 583 591 . + . ID=g12194.t1.utr5p2;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 412 487 . + . ID=g12194.t1.exon1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 583 756 . + . ID=g12194.t1.exon2;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 592 756 . + 0 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 868 934 . + . ID=g12194.t1.exon3;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 868 934 . + 0 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 1266 1350 . + . ID=g12194.t1.exon4;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 1266 1350 . + 2 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 1540 1638 . + . ID=g12194.t1.exon5;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 1540 1638 . + 1 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 1815 1942 . + . ID=g12194.t1.exon6;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 1815 1942 . + 1 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 2191 2303 . + . ID=g12194.t1.exon7;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 2191 2303 . + 2 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 2538 2651 . + . ID=g12194.t1.exon8;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 2538 2651 . + 0 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 2879 3043 . + . ID=g12194.t1.exon9;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 2879 3043 . + 0 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 3273 3441 . + . ID=g12194.t1.exon10;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 3273 3441 . + 0 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 3769 3912 . + . ID=g12194.t1.exon11;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 3769 3912 . + 2 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 4330 4486 . + . ID=g12194.t1.exon12;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 4330 4486 . + 2 ID=cds.g12194.t1;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . exon 4577 4711 . + . ID=g12194.t1.exon13;Parent=g12194.t1 NODE_2929_length_4717_cov_37.1822 . CDS 4577 4711 . + 1 ID=cds.g12194.t1;Parent=g12194.t1;3_prime_partial=true #PROT g12194.t1 g12194 MSFLAVAAARRAVGANASGMRASASYALAAVRSYHHENKLHVIDGRVDANTEDFKTNKEHMESLVKDLKDKMVKIRLGGGATARNRHTAKGKLLPRDRISALLDPGAPFMELSQFAGHGLYEEDLPAGGIITGIGRVSGLECVVVANDATVKGGTYYPITVRKHVRAQEIAMENKLPCVYLVDSGGANLPHQAEVFPDRDHFGRIFFNQANMSAMKIPQIAVVMGSCTAGGAYVPAMADESVIVKNQGTIFLGGPPLVRAATGEVVSAEELGGADLHCRTSGVTDHYALDDMHALATARRIVANLNIRKQAQVTMAPSVDPIFAAEDMYGIVGGNLRKTFDVRKVISRIVDGSRFDEFKELYGTTLVTGFARIHGYPVGIVANNGVLFSESALKGAHFIELCSQRGIPLVFLQNITGFMVGKAAESGGIARNGAKMVTAVACAKVPKFTVIIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGEQAAGVLSTIQREQREREKKQPVSDVG # ORIGINAL: g8405.t1 original gene structure, not modified by PASA NODE_827_length_17255_cov_38.7976 AUGUSTUS gene 360 605 . + . ID=g8405;Name=g8405.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS mRNA 360 605 . + . ID=g8405.t1;Parent=g8405;Name=g8405.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 360 605 . + . ID=g8405.t1.exon1;Parent=g8405.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 360 605 . + 0 ID=cds.g8405.t1;Parent=g8405.t1 #PROT g8405.t1 g8405 MQRTVSDAADDTDEPRRLREAAGTRRGKKLRENMQLRGDGELDDIDEEFNTGDDGSLDSRNNPIADEDIINTVFTNPAAVL* # PASA_UPDATE: g8409.t1, single gene model update, valid-1, status:[pasa:asmbl_9569,status:12], valid-1 NODE_827_length_17255_cov_38.7976 . gene 10149 16420 . - . ID=g8409;Name=g8409.t1 NODE_827_length_17255_cov_38.7976 . mRNA 10149 16420 . - . ID=g8409.t1;Parent=g8409;Name=g8409.t1 NODE_827_length_17255_cov_38.7976 . five_prime_UTR 16331 16420 . - . ID=g8409.t1.utr5p1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 16190 16420 . - . ID=g8409.t1.exon1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 16190 16330 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 15678 15761 . - . ID=g8409.t1.exon2;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 15678 15761 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 15229 15360 . - . ID=g8409.t1.exon3;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 15229 15360 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 14841 14933 . - . ID=g8409.t1.exon4;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 14841 14933 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 14454 14540 . - . ID=g8409.t1.exon5;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 14454 14540 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 13944 14216 . - . ID=g8409.t1.exon6;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 13944 14216 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 13455 13651 . - . ID=g8409.t1.exon7;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 13455 13651 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 13083 13221 . - . ID=g8409.t1.exon8;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 13083 13221 . - 1 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 12099 12839 . - . ID=g8409.t1.exon9;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 12099 12839 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 11823 11884 . - . ID=g8409.t1.exon10;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 11823 11884 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 11219 11510 . - . ID=g8409.t1.exon11;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 11219 11510 . - 1 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 10879 10979 . - . ID=g8409.t1.exon12;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 10879 10979 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 10454 10640 . - . ID=g8409.t1.exon13;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 10454 10640 . - 1 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . exon 10149 10360 . - . ID=g8409.t1.exon14;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . CDS 10295 10360 . - 0 ID=cds.g8409.t1;Parent=g8409.t1 NODE_827_length_17255_cov_38.7976 . three_prime_UTR 10149 10294 . - . ID=g8409.t1.utr3p1;Parent=g8409.t1 #PROT g8409.t1 g8409 MFRAARIRPAVAAAGFRSCTRPSLANGGASGCRSGYSYSTATNAIDRATLARVMNAVTSRRDVEYFMHLFGKDHSARHVAVVKVGGAIIEEELDVLSDSLLTLLRVGMAPVVVHGGGPQLNKVLEAAGIEPEYIDGMRVTDKATLETAQKVFQGENEKLTAALRARGISAVPFLEGVVQAKVLDFNKWKFVGKPTGAKVEGVNKVVAAGGIPVISSLAQDEASGATLNVNADTAACELARAVRPLKTVFLNSTGGILHGVTKQRIPVIDVENEYDALLKQPWVKYGTRLKIVEIRDLLFSLSNRASTVTITSTKQLLPALLYGSSTDGTKMKRGYRISHHVTMQALNQSRAASLLSSANPNMGETTARDRIAQLAQTSNIHGVFTDDDCNCLAIVSIPGTGQRPVLEEFAVSSEARVSGSEDQLWDRVRETYADLQWSIPANSTDDAIAWHLQRAKGSLRDDAKNAIRFWYETSGQTETGPAKAAARAHAASGTEPGSGVTSIASTAAAAAAASAAKGERKFSSWAASWSHGVQRRGYATSARKYGIGIVGARGYVGTELMKLIAGHSSFEIACVGSRAHEGQRVSDNVPGLHSDVKYTNITPADIAKYSTVDCWVLALPNGLAGPYVEAIKSVGTSRRTVTVDLSGDHRFDREWQYGLPERFRHDIKDARFISNPGCYASGAQFGLLPLLGSIDGAPSIFGVSGYSGAGTTPSPKNDPKYLADNLIPYSLTGHLHEREVSRQLGRQVHFMPHVAPFFQGITLTISVPLTENIAPQKALEKFQAYYASEPLIRVQKDIPVVKDISRKHHVTIGGFAAAEEGRRLVLVSTIDNLLKGAATQALQNMNLALGVDELEGIKQFVTPK* # ORIGINAL: g8406.t1 original gene structure, not modified by PASA NODE_827_length_17255_cov_38.7976 AUGUSTUS gene 1941 2597 . + . ID=g8406;Name=g8406.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS mRNA 1941 2597 . + . ID=g8406.t1;Parent=g8406;Name=g8406.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 1941 2597 . + . ID=g8406.t1.exon1;Parent=g8406.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 1941 2597 . + 0 ID=cds.g8406.t1;Parent=g8406.t1 #PROT g8406.t1 g8406 MEITQGSQPHTGSGARKSSKLSAPDEALDDDWLRCHGAGRGRGCGFSIQHSSDERGSAVFPAVCAADSETTRQRSLNRDAAKFGAFPKRSPGKKSIKPLCCKEATGQKDRRKISSQSVMCPSGKKEKREKAQAGTNEMGEGLGRKTMMIMMMRHSNKRRKRKNATLNVNATHSAHAEKCAESFDTARSSRPHAPHGGRGTGRQASIAGTRDIRNRRRG* # PASA_UPDATE: g8408.t1, single gene model update, valid-1, status:[pasa:asmbl_9570,status:12], valid-1 NODE_827_length_17255_cov_38.7976 . gene 5873 9768 . + . ID=g8408;Name=g8408.t1 NODE_827_length_17255_cov_38.7976 . mRNA 5873 9768 . + . ID=g8408.t1;Parent=g8408;Name=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 5873 5885 . + . ID=g8408.t1.exon1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 5873 5885 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 6144 6208 . + . ID=g8408.t1.exon2;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 6144 6208 . + 2 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 6442 6579 . + . ID=g8408.t1.exon3;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 6442 6579 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 6842 7018 . + . ID=g8408.t1.exon4;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 6842 7018 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 7266 7364 . + . ID=g8408.t1.exon5;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 7266 7364 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 7533 7607 . + . ID=g8408.t1.exon6;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 7533 7607 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 7884 8093 . + . ID=g8408.t1.exon7;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 7884 8093 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 8418 8546 . + . ID=g8408.t1.exon8;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 8418 8546 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 8729 8848 . + . ID=g8408.t1.exon9;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 8729 8848 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 9138 9295 . + . ID=g8408.t1.exon10;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 9138 9295 . + 0 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . exon 9521 9768 . + . ID=g8408.t1.exon11;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . CDS 9521 9668 . + 1 ID=cds.g8408.t1;Parent=g8408.t1 NODE_827_length_17255_cov_38.7976 . three_prime_UTR 9669 9768 . + . ID=g8408.t1.utr3p1;Parent=g8408.t1 #PROT g8408.t1 g8408 MVLQAIRSVRNAFAINSLAAAAIRRSAVRRQTTWTGQSAADAYNKYIVPTYIRPNLAFVRGKGVYVYDTEGKEYLDFSSGIAVNALGHSDPDWANAVAEQAHTLCHVSNLFHSIPSIELAQSLTELSFADKVFFSNSGTEANEGAIKFCRKWGITQDPSGAKHVIISFSSGFHGRTMGALAATHNPAYQNPFAPHVPGIIQATYNDPSAVDLVGKNVCGVFVEPIQGEGGINPAKKDFLTALRKKCTDEKALLVFDEVQCGLGRTGHLWAHDHPAFGVKPDVLTLAKPLAGGLPIGAILMTQAVSDVMKPGEHGSTFSGGPLVCRAAQVVLGKISNPAFLQKVRDNGEYLKERLVDVQRSRSDYVKEVRGFGLMVGVELFPGIAAAEVTAPCFDRGMIIITSGKQVLRLLPPLIIDRSHVDVAVKIIADSLDEVIAKRKKASQ* # ORIGINAL: g8407.t1 original gene structure, not modified by PASA NODE_827_length_17255_cov_38.7976 AUGUSTUS gene 2778 4288 . - . ID=g8407;Name=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS mRNA 2778 4288 . - . ID=g8407.t1;Parent=g8407;Name=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 4221 4288 . - . ID=g8407.t1.exon1;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 4221 4288 . - 0 ID=cds.g8407.t1;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 3863 4085 . - . ID=g8407.t1.exon2;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 3863 4085 . - 1 ID=cds.g8407.t1;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 3416 3750 . - . ID=g8407.t1.exon3;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 3416 3750 . - 0 ID=cds.g8407.t1;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS exon 2778 3294 . - . ID=g8407.t1.exon4;Parent=g8407.t1 NODE_827_length_17255_cov_38.7976 AUGUSTUS CDS 2778 3294 . - 1 ID=cds.g8407.t1;Parent=g8407.t1 #PROT g8407.t1 g8407 MDSTCDMFPLEFSAEAFFASDNGFDINDLIVPDDFEDLLFDGANGISSDDSSLTCAGSPSSCSGSNTVPGSPLSSCDASTVAGLPLEWDGECTVPKEGEMRTCTNCSATKTPLWRKGADGGFLCNACGLYFKAYQSHRPTCRAASKKPRAKSAMALAAAEGCAGAVERCAPNGQSCANCATTRTTLWRRDTKGRLVCNACGLYSKMHKKDRPLKLKGTQIRTRSRKFGGDVLSSKPAKPVLSASASAGCAPALSVASAAHCALPPFFGLSLEHAPPVNLALAAAMTNPGESAAACASVAASVANMQFAAAALSMGSPFGYPLMQMAPMGSPFAPMAMASAAAATPEDSLAFQLRLRMIESQLFALGSMLAAGMLPPKPEQ* # ORIGINAL: g7028.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 16625 18490 . - . ID=g7028;Name=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 16625 18490 . - . ID=g7028.t1;Parent=g7028;Name=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 17301 18490 . - . ID=g7028.t1.exon1;Parent=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 17301 18490 . - 0 ID=cds.g7028.t1;Parent=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 17050 17143 . - . ID=g7028.t1.exon2;Parent=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 17050 17143 . - 1 ID=cds.g7028.t1;Parent=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 16625 16912 . - . ID=g7028.t1.exon3;Parent=g7028.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 16625 16912 . - 0 ID=cds.g7028.t1;Parent=g7028.t1 #PROT g7028.t1 g7028 MINAARLWRPRAPRTLQSIVQCVRGGNSAVPATNAQCWHHTTASRLSPDASGKKKDEASNSGIAQDKGRKPRIDFKRMISNKEAVVENIANRGVKGVDVAAIEELYTKNLRESQRLDALRHERNVIAKEIEQLRGQHPERRAQLIERGRAVKEEISALQDAFSGSESSLLEHGLRVPNDSSPHSPIGEEANARLLYETPVDERPRLDCEPKDHVQLGSLLGIIDVETAARASGAGFYYLKGAAALLEYALVGYALHSAVARGYVPVITPDVSRMSVAEGCGYRPREGGSNNQTFALGGAYSNLCLVGTAEIPIAALHMSQVMDDADLPRKYVGLSHCFRAEAGHHGTETKGIYRVHQFTKVELFAFTKSNTAESEQALAEIVAFQTDLFRSLGLPIRVLEMPTMELGASAYRKIDIEAWMPGRNKYGESRRLEIRHRSSDAKGKAEVHLAEHGSTSSRFVHTINGTAAAIPRLIVAILENFQRPDGSVVIPEPLRAYMGGKDVIFVPALEAAASGHVGSRIEI* # PASA_UPDATE: g7030.t1, single gene model update, valid-1, status:[pasa:asmbl_815,status:12], valid-1 NODE_120_length_37816_cov_41.3793 . gene 20486 22277 . + . ID=g7030;Name=g7030.t1 NODE_120_length_37816_cov_41.3793 . mRNA 20486 22277 . + . ID=g7030.t1;Parent=g7030;Name=g7030.t1 NODE_120_length_37816_cov_41.3793 . exon 20486 20674 . + . ID=g7030.t1.exon1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . CDS 20486 20674 . + 0 ID=cds.g7030.t1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . exon 20856 20954 . + . ID=g7030.t1.exon2;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . CDS 20856 20954 . + 0 ID=cds.g7030.t1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . exon 21153 21329 . + . ID=g7030.t1.exon3;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . CDS 21153 21329 . + 0 ID=cds.g7030.t1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . exon 21596 21772 . + . ID=g7030.t1.exon4;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . CDS 21596 21772 . + 0 ID=cds.g7030.t1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . exon 21947 22277 . + . ID=g7030.t1.exon5;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . CDS 21947 22081 . + 0 ID=cds.g7030.t1;Parent=g7030.t1 NODE_120_length_37816_cov_41.3793 . three_prime_UTR 22082 22277 . + . ID=g7030.t1.utr3p1;Parent=g7030.t1 #PROT g7030.t1 g7030 MYTTQSLSRETEPNEHLYGYCGLIYALEYAHKVIPGLESEAADRMLATAIAERVVMAGLKNAKHDDLGLPLMYSWHGKRYLGAAHGIAGIMYTLLGFPSLVKTYDVVFRETIDGLATLKFESGNYPSSPSSTSDQLVQWCHGATGFVFLFSRAYEVFKDGRYLRAAIDCGQVVWRRGILAKGRGLCHGTAGNGYIFLCLYRLTGDLMQLYRALRFASLSVPSESDHPWSLFEGLAGTIHYQADVLSPAESRFPGFELP* # PASA_UPDATE: g7031.t1, single gene model update, valid-1, status:[pasa:asmbl_813,status:3], valid-1 NODE_120_length_37816_cov_41.3793 . gene 22302 24881 . - . ID=g7031;Name=g7031.t1 NODE_120_length_37816_cov_41.3793 . mRNA 22302 24881 . - . ID=g7031.t1;Parent=g7031;Name=g7031.t1 NODE_120_length_37816_cov_41.3793 . five_prime_UTR 24842 24881 . - . ID=g7031.t1.utr5p1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 24512 24881 . - . ID=g7031.t1.exon1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 24512 24841 . - 0 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 24274 24378 . - . ID=g7031.t1.exon2;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 24274 24378 . - 0 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 24074 24136 . - . ID=g7031.t1.exon3;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 24074 24136 . - 0 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 23730 23851 . - . ID=g7031.t1.exon4;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 23730 23851 . - 0 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 23366 23434 . - . ID=g7031.t1.exon5;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 23366 23434 . - 1 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 23106 23227 . - . ID=g7031.t1.exon6;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 23106 23227 . - 1 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 22902 22956 . - . ID=g7031.t1.exon7;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 22902 22956 . - 2 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . exon 22302 22701 . - . ID=g7031.t1.exon8;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . CDS 22407 22701 . - 1 ID=cds.g7031.t1;Parent=g7031.t1 NODE_120_length_37816_cov_41.3793 . three_prime_UTR 22302 22406 . - . ID=g7031.t1.utr3p1;Parent=g7031.t1 #PROT g7031.t1 g7031 MGQSIARMLDEPVNTAHDADHSIAGTAGDGNALAPCDIVVRRRVCATPQLQQRSKSAPILSSNGFFGRRPLAIVRFIDLATLPEDIALTILSHLNATDLCLAACVSPAWERLADHNCLWRSLCHRTWKFLAEIPGFNRNPSDKIQWKKVYMLLDDASLLFNMDPQRGLASLVLSKALPDDSPGNVARFLKTSTPVRKEKIGHMIVTSPDIARAYISMFDFGGMPLTDALRRFLDAFHFPKGTPARSRDVVLEMFAARYHTCNASATSLPPESVFVLVCSTILLSVDLYSPQIKIKMTKREFLRTHHRNYPPALHIPEDLLCAIYDDVYVRGHVVNPDSFSSQPTRRSRHRPSEGPGELWDITRRLQVRRGTEGNGEIHMQHRAFVA* # ORIGINAL: g7025.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 5078 11698 . + . ID=g7025;Name=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 5078 11698 . + . ID=g7025.t1;Parent=g7025;Name=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 5078 5205 . + . ID=g7025.t1.exon1;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 5078 5205 . + 0 ID=cds.g7025.t1;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 5520 9109 . + . ID=g7025.t1.exon2;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 5520 9109 . + 1 ID=cds.g7025.t1;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 9353 9640 . + . ID=g7025.t1.exon3;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 9353 9640 . + 2 ID=cds.g7025.t1;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 9816 11698 . + . ID=g7025.t1.exon4;Parent=g7025.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 9816 11698 . + 2 ID=cds.g7025.t1;Parent=g7025.t1 #PROT g7025.t1 g7025 MTTCDATWPCTSHSMAIYTMFLEMTSTGLLTITVLPYPSSLDNTWHHLLVSYNRSSIIVLYGDGSAIGTMASLETSVAGIHNLTSGYDTVIGSDGLAGYLYPTWWDGDIDDVVIWRRALSPADAAAVYARGLMGLDIHSGIAFTCDDMIEVCEDESKAIPSSFRATCPSGCRSYDNSIHMAAEFTVVYPKAASICAAAVSSGIASADADGASATLTVKIHSIWNNGVVFTVEPVCGDGVRMNGEQCDDGNVDDNDGCTQCIIDRGYVCAQDVGMRYNGPRRGCRTICGDGVVSGMEACDGGGVELVGCESNCTLMRGYVCIYPEDHTTMPRLNPQCHPVGCGDGVRSGFEECDDGNIQSGDGCSSTCHVERNWACQSIHVDGNMAFDVCNPPLNVAQGGDDGANCSATAPCATVHRASSIAEAMDGVAYIIVGDGVYIFKSAISPTMRPGRSLLLRAAGNDAIFDCGGTGMAVEVVGGSLVMEGITVRNCAPSGFEEAAVLVRNGNATFVGCTFANNTVSSPTGVYPRARAPAVVVRNTLSTAGEGVDSFADFIACTFVDNAITFRTGEYTQWEITEGIQDASVAGGAVVVNSTRRVSISRCIFRGNSAQSILAAGAVYVIHFGTGIKGTIVRVTDSLFEGNRADGREEVAGGLMVASTAPIATVADPLVSFENCTFLRNSANCASVKSQLPRARASGGIGIYYMAPVCSAAHHVVSRCVFEGNYVAVSWLTYAVASGAVSLMSACSGIASEFRTEVRGSHFMGNRISASFVDTSVFAGSIAVLSYRGLLSNSIVTIRDTVFSDDAANVTDAFSCGTGGSIAIAAVMRTHQLGGDDLRTVGNSYTLQNTTHLRPWVTVVGKADMAVGAVACIFHFTENPLANVHNNNSLLVDSVTVLSAAASLIASFRSVVTPGIAVFYLGSTQSNSVTILKSEFFELDALLQTDTGTNCLVAGAIGVYFASSDQSSNVTIRSTSANGAQVAARALTAVFAAGAFGVICDGSRFQGLRLSLAHCDIRGNDCDSGSGAVEVVGPRSSADMDVGIAGSTFSDNRGGKGAGVIHVSPNSGTLSIDTSVFVRNIGRDSGAIFLQFPAIGSSASGGLFRGSRLSFVRNVGTFVGGAVNIERKMSCNFTDVQFVENRASIGGALFLDFDSSLWASQCGFIRNKGDIGSGVYGARLSFTDCVVEGAGDGVVMLGLRPSPTVIDLFHNTTVSCPRGYLLEKRGYNMMSQLMCNMCPEGRYLLMNGSDTVDSACLICPSGAVCRGGSHIRSVPNHWGSLKHNKASLSLSACPPGLCCATAEECEAGPCTSGHLGILCADCPSGTSASLFRRACVDNAECTDGVWFIPLVAVATAGIFAALLCLTPVGSSGMLRILQGFAYFAYIAVSARGNGIVEAVVVLNGLWALQFAVAPALAADVCLFPGLSVVHGVFFQLFAPLLLIGICAFYSVFWALRAFGGRQRSAGVGQKQVDAFPFSTVYAVFLLAFPPIWTTLLRLISCEEIDGEMRLHEMASFTCVDNGFHSAALGLLPILLLVPVILLAAIYMHRRQSPLSCDGTEQTASGHGGHGPIERDVISNVGCADLQFGITERCVDAPPSRRYLGMMLMPIVVCGRRVCRWLCWDVLAPIGIVAASPYKPHYPYWDVLDLSFRMVFGLCGVLIVDMGVKAYVLCALLWIAFLVHWHVCPWRMRGDALLEILSLFLLVAIATLQICTTAAHALGVNPNEAGSTKKSIRALGVALGAIQSVAIVSFLAVLLSTAALVTLPGLKAASVPSRLVSWSMLPAVGWARAPQLLDAVDRSQSTGGAELRRRRTRRPPSKETLARLAEANKLFDMHYAGTTIVNSLPQTHWDASAIDDAIAPHKIRLYPVGGEVVGVHDESRPAALSVLLSSGSISANASSSSLCSECSIPAQDRPCSCQTASHSAQPIIDRTPSERLSERHSKVSFLLTTPAPCHSGDAST* # ORIGINAL: g7023.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 62 367 . + . ID=g7023;Name=g7023.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 62 367 . + . ID=g7023.t1;Parent=g7023;Name=g7023.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 62 367 . + . ID=g7023.t1.exon1;Parent=g7023.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 62 367 . + 0 ID=cds.g7023.t1;Parent=g7023.t1 #PROT g7023.t1 g7023 VSTQGSFKIGLTRDPERRFRQDDYKRSYRQMHILACFDTFQAAGVMESHLIDKFGANVNCANKLSGGDGREGQRGPYFVYVVHGGAALLGKAVRHAGSSAR* # ORIGINAL: g7033.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 30861 33962 . - . ID=g7033;Name=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 30861 33962 . - . ID=g7033.t1;Parent=g7033;Name=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 33810 33962 . - . ID=g7033.t1.exon1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 33810 33962 . - 0 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 33304 33460 . - . ID=g7033.t1.exon2;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 33304 33460 . - 0 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 33027 33184 . - . ID=g7033.t1.exon3;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 33027 33184 . - 2 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 32659 32877 . - . ID=g7033.t1.exon4;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 32659 32877 . - 0 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 32079 32395 . - . ID=g7033.t1.exon5;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 32079 32395 . - 0 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 31692 31887 . - . ID=g7033.t1.exon6;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 31692 31887 . - 1 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 31163 31437 . - . ID=g7033.t1.exon7;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 31163 31437 . - 0 ID=cds.g7033.t1;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 30861 31005 . - . ID=g7033.t1.exon8;Parent=g7033.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 30861 31005 . - 1 ID=cds.g7033.t1;Parent=g7033.t1 #PROT g7033.t1 g7033 MSKLSFRARTIDVTKPLPVFKASDVPDIEDASTISRALAPMATGMEKEEEEEHHIQVLIASSTVNYSDSQIVIPTPETEEVQDYFDQKYKSGYKQPKHFIRHHVGHLDEVVDYDMDTDDEGWLEGFNSSIDSKIQLKKERYEQLIDRLEKTSPTADHLVSAEEARRLLEDVDDEVVKALYARWRERRQQRNGLPIEPFVRTLKKPGDTSYANDPYVAFRRRNERMQTRKNRKNDETSYERMLKLRRDFERARSLIEMLKRREKFKRESVNLSLEIFTRYHQLGEAPKPPEPPPKPMVTVHASVAEKVKKKKKRRIDSDDASVPNGDGPVPKIKLKLPVGIVVDGAEKKVKLKKAERLALAKAAAEVEEAEVDPVVAAEDEESADEGPFAFRRRKEFAYHLPVADFRMPVIQATSSCYSRVLRVSRGGVYISCARRRVGRGGRIFIDRSDGDDWLGAAVVDEDDPDAMDVGNDGADSARKDEGPLAIFANIGSMRITFGSFVGHDSSHDLPFPARPVPKASSAAVVSVDDFGMDIDPSSP* # ORIGINAL: g7027.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 14054 15976 . - . ID=g7027;Name=g7027.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 14054 15976 . - . ID=g7027.t1;Parent=g7027;Name=g7027.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 14054 15976 . - . ID=g7027.t1.exon1;Parent=g7027.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 14054 15976 . - 0 ID=cds.g7027.t1;Parent=g7027.t1 #PROT g7027.t1 g7027 MASYTWSAARGVVDAGRLGAVMQHPPTPARSLAGQWRTLLFRAARDGDLTSVRGCLSNGGSKEINATDATGETPLHVAAFRGYLTIVQVLVDAGADIHAQDAKGGTPLHSAVNGCDMQVFTFLLSCGAHIDAQDHRLRTPLHYASEWGDAHVVRFLLNCGANPNVRDAVSRLPRDMTRRSDIRGLLSQPQVDLHEASAQRKMAFRVLDDLLREEERSLLQREREMQAQRAVRLQRRLDYESRAAKEREQAMRTRSEIEAYVKQERRMLADSVAEVKRRAQSEAHERRRRERLEQQDLQMKRLTTELERTWRQLEVSVLKVPKVTPNSRRHVVVATTFTGLEGWDPNAGLNGIGQFPTLEDGSSEAPIVGSAYGHRMPERSPPPLANMYGVSWAPSSPHHRAHTAIPHSHFSPKQRHDSKGSEASQRSRSANAVVIGTSNLHVLGDSDVSSSDEDTKKGYPRLGVRPKSSLDRTRGSHAPTATTTAPTTAPATVNGHATDASQSGGAHTEGAAAAEASATHEMDGTGIAASAVVFPATHAGEVGGADSAVAVVAGAHTSPLESASASASAIPHGDGLSHDSDITHVDSAATSEAPAPVPEPPEQEPAVDPDLIFGKPITEGAVVVVNRSASKAKLHGDRRS* # PASA_UPDATE: g7032.t1, single gene model update, valid-1, status:[pasa:asmbl_814,status:12], valid-1 NODE_120_length_37816_cov_41.3793 . gene 25321 28955 . - . ID=g7032;Name=g7032.t1 NODE_120_length_37816_cov_41.3793 . mRNA 25321 28955 . - . ID=g7032.t1;Parent=g7032;Name=g7032.t1 NODE_120_length_37816_cov_41.3793 . five_prime_UTR 28922 28955 . - . ID=g7032.t1.utr5p1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . five_prime_UTR 28522 28563 . - . ID=g7032.t1.utr5p2;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 28922 28955 . - . ID=g7032.t1.exon1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 28441 28563 . - . ID=g7032.t1.exon2;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 28441 28521 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 28172 28266 . - . ID=g7032.t1.exon3;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 28172 28266 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 27922 27982 . - . ID=g7032.t1.exon4;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 27922 27982 . - 1 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 27584 27658 . - . ID=g7032.t1.exon5;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 27584 27658 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 27207 27336 . - . ID=g7032.t1.exon6;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 27207 27336 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 26924 27050 . - . ID=g7032.t1.exon7;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 26924 27050 . - 2 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 26569 26767 . - . ID=g7032.t1.exon8;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 26569 26767 . - 1 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 26121 26204 . - . ID=g7032.t1.exon9;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 26121 26204 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 25792 25914 . - . ID=g7032.t1.exon10;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 25792 25914 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . exon 25321 25552 . - . ID=g7032.t1.exon11;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . CDS 25457 25552 . - 0 ID=cds.g7032.t1;Parent=g7032.t1 NODE_120_length_37816_cov_41.3793 . three_prime_UTR 25321 25456 . - . ID=g7032.t1.utr3p1;Parent=g7032.t1 #PROT g7032.t1 g7032 MESVPIIDLSKFLLDPTDPDAVAEAKKCAEALRQLGCLAVRDPRVTMEDNDKFMDLMERYFEQTDKQKKPDERPEYGYQVGVTPAHTEVPRCTLDPSCLERIKSLDEENKAHMPTGPDPKWRFFWHVGDRPAQTKFSKLNAAPVIPKAFPEWETLMNRWGSLMHAAVSSVTQMAAVGFDMPINTILDMSKCGPHLLAPTGSDLSKYGDIDTIFAGYHYDLNLLTIHGKSRYPGLYIWRRDGKKIAVRVPDGCLLVQAGKQFEWITGGAVEAGYHEVVVNQATREAMERNKAAGKSLWRISSTMFFHIASDSTLRPLTEFGFPNSEQGKYPATLAGDQVAAELKAIKLMNLDGAGDE* # ORIGINAL: g7034.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 34665 37727 . + . ID=g7034;Name=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 34665 37727 . + . ID=g7034.t1;Parent=g7034;Name=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 34665 35016 . + . ID=g7034.t1.exon1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 34665 35016 . + 0 ID=cds.g7034.t1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 35105 36540 . + . ID=g7034.t1.exon2;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 35105 36540 . + 2 ID=cds.g7034.t1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 36715 36878 . + . ID=g7034.t1.exon3;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 36715 36878 . + 0 ID=cds.g7034.t1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 37047 37075 . + . ID=g7034.t1.exon4;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 37047 37075 . + 1 ID=cds.g7034.t1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 37254 37423 . + . ID=g7034.t1.exon5;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 37254 37423 . + 2 ID=cds.g7034.t1;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 37659 37727 . + . ID=g7034.t1.exon6;Parent=g7034.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 37659 37727 . + 0 ID=cds.g7034.t1;Parent=g7034.t1 #PROT g7034.t1 g7034 MDGDPVGAGWDDGSGIHWDTHGQGAHQHQESHNALRVLQEYGDDSGATATHDLSDSSVMYYDISSTVNIDSQRHHSAPHNRSHNTPGSAMNASAAASSRATVKYAEDGDASGDRTPEEARAFSAAVGAMRQGAYAWDAEDSSISIGAHRASSQRDAVDYTPHFISAGTVDAPRESEARAGGAARRLLDGAGGRDEMARYLADVERRTQLLSIGVRNATNAVGSESVSQAIQEPLSIEGSATLNELQARATSHADGQRTLPNQSDRRQPIGQRAANVAARTGNREVNTHTATVVASSNLAAHGSDREESRGVVQNRINPIDDLNMELAALSLRPLDFVRVHPDDGTAVLASADLRDLCAYVANVARNYDRRGALIEELTLSINQSASALSASERRVQALAAQLEEVQRESETNARLRKEATDRLAAESTRWDLARRQGEAARCGMEEKLRLARSKMESLDKEIGRMREKLDAVAERDERRETRAKELFKELMGRPVRMAAGHDKRTLEIVAAFERDREKKRAEIERLTRDVARLSAAEAAFMEPVETKQLRRSTVKVAAVQQSTGVSDDGHHGLTENVDALVARHFEETTELKARIRGLEDTLRRTREDADAASRECSTLQTEVASRPTVREWREAKRRQKELEEKIAELAGEHVDIENFRVGNDEHADKRQRTRELIERDKEMYRLRLYKIDRLSVHECRRILKNVCHFLAVDDVALVMPTLHSLVETAEDAKLLRKVC* # ORIGINAL: g7029.t1 original gene structure, not modified by PASA NODE_120_length_37816_cov_41.3793 AUGUSTUS gene 18999 19574 . + . ID=g7029;Name=g7029.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS mRNA 18999 19574 . + . ID=g7029.t1;Parent=g7029;Name=g7029.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 18999 19233 . + . ID=g7029.t1.exon1;Parent=g7029.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 18999 19233 . + 0 ID=cds.g7029.t1;Parent=g7029.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS exon 19435 19574 . + . ID=g7029.t1.exon2;Parent=g7029.t1 NODE_120_length_37816_cov_41.3793 AUGUSTUS CDS 19435 19574 . + 2 ID=cds.g7029.t1;Parent=g7029.t1 #PROT g7029.t1 g7029 MSLAMFAASTALSVTPPLKLSADERNYENPFEKYDAARHVVLVDGEVAPEWKDTIMARLIADVRIFEQKYPPDKSKGKDYSVYTGSTGVALTCLKLARRFVSNDEDRKMWLHKAWSYVEGKSSL* # PASA_UPDATE: g7026.t1, single gene model update, valid-1, status:[pasa:asmbl_812,status:12], valid-1 NODE_120_length_37816_cov_41.3793 . gene 11857 13706 . - . ID=g7026;Name=g7026.t1 NODE_120_length_37816_cov_41.3793 . mRNA 11857 13706 . - . ID=g7026.t1;Parent=g7026;Name=g7026.t1 NODE_120_length_37816_cov_41.3793 . five_prime_UTR 13643 13706 . - . ID=g7026.t1.utr5p1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 13631 13706 . - . ID=g7026.t1.exon1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 13631 13642 . - 0 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 13463 13522 . - . ID=g7026.t1.exon2;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 13463 13522 . - 0 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 13277 13339 . - . ID=g7026.t1.exon3;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 13277 13339 . - 0 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 13050 13168 . - . ID=g7026.t1.exon4;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 13050 13168 . - 0 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 12806 12899 . - . ID=g7026.t1.exon5;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 12806 12899 . - 1 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 12461 12597 . - . ID=g7026.t1.exon6;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 12461 12597 . - 0 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . exon 11857 12262 . - . ID=g7026.t1.exon7;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . CDS 12109 12262 . - 1 ID=cds.g7026.t1;Parent=g7026.t1 NODE_120_length_37816_cov_41.3793 . three_prime_UTR 11857 12108 . - . ID=g7026.t1.utr3p1;Parent=g7026.t1 #PROT g7026.t1 g7026 MSEVTKGAYPRKCGWLAKQGGSNKGWKRRWCVFDQLALSYFKSEQDKEYAGVVYAEDMKSISIREDESKKDVKYPFCFEVETPDRAYMFSADSREEMDDWIRVIKSVWEGASTNVQVRQQFATVECFVDSGVRVNGQLDPAILAAFSEGANPKQKRKDERGWFVDKYVPCATVLQVMSKHNWALSSSFKTQSFVDAKQYPVTMLVFTRPYHE* # PASA_UPDATE: g7024.t1, single gene model update, valid-1, status:[pasa:asmbl_811,status:12], valid-1 NODE_120_length_37816_cov_41.3793 . gene 790 3860 . - . ID=g7024;Name=g7024.t1 NODE_120_length_37816_cov_41.3793 . mRNA 790 3860 . - . ID=g7024.t1;Parent=g7024;Name=g7024.t1 NODE_120_length_37816_cov_41.3793 . five_prime_UTR 3797 3860 . - . ID=g7024.t1.utr5p1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 3439 3860 . - . ID=g7024.t1.exon1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 3439 3796 . - 0 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 2128 3269 . - . ID=g7024.t1.exon2;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 2128 3269 . - 2 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 1866 1944 . - . ID=g7024.t1.exon3;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 1866 1944 . - 0 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 1555 1676 . - . ID=g7024.t1.exon4;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 1555 1676 . - 2 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 1356 1438 . - . ID=g7024.t1.exon5;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 1356 1438 . - 0 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 1075 1192 . - . ID=g7024.t1.exon6;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 1075 1192 . - 1 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . exon 790 934 . - . ID=g7024.t1.exon7;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . CDS 875 934 . - 0 ID=cds.g7024.t1;Parent=g7024.t1 NODE_120_length_37816_cov_41.3793 . three_prime_UTR 790 874 . - . ID=g7024.t1.utr3p1;Parent=g7024.t1 #PROT g7024.t1 g7024 MKGRRCTHAGYARPAWGVAVLAVTLALFELSWASVVEDVSSSVALGNGAGRMMAFADVNNDQKTDLIVVSDAGTALNALIWNADKKSFARLSKVNIDVTDAAGTDALIVNIHAGDFNYDGMADLLVSTTGSTSTADASASSVVSSHVFLGDMATFHQPAYPPVVTVGQPLVLDANGDSFMDLFGVSAGSGLPSFFMGDARGNFSVELEAVGFSIPRSSHSIAFVDFDGDCVADLAMVTEDEEGSLHIEVRLSRIAAESPSVRFATVDARIPIPSGSGQPSYADVDGDGSIDVVVPYIATGESEDVYSSVLVAFNEQMKTCDTNLADKSNCRESTKLCVAASELKFILSMKAAWMGGATFPSSETLRLRDPFADGLPWIRACDYNLDGYADFVAVLDVSGTPTPVLLDNSHDAAQPNARMLRAVILGAVAEGLAMDAAFFDLYEDGIPDLIVATAPSSIGSRSIVPLRNELYTDAYFIKIAVGGGSCPSLCDGPTRYPSPKPYGSVVAGAVVKYTITDVDGKMRMSGGMQLSQSSHRALQTPYTVFGLGRTPNYVKDLCVGVPFTENGKLNNNQWTLVIPNSQLFVFPYPLFEPKLWTLDLLITPAKVLVWAGVILLSMCLILAVVVLGLHWKEKREDEREKRRMAHLFHFDAM* # PASA_UPDATE: g13960.t1, single gene model update, valid-1, status:[pasa:asmbl_7174,status:12], valid-1 NODE_427_length_23939_cov_40.6542 . gene 21411 23775 . - . ID=g13960;Name=g13960.t1 NODE_427_length_23939_cov_40.6542 . mRNA 21411 23775 . - . ID=g13960.t1;Parent=g13960;Name=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 23637 23775 . - . ID=g13960.t1.exon1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 23637 23775 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 23312 23382 . - . ID=g13960.t1.exon2;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 23312 23382 . - 2 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 22845 23063 . - . ID=g13960.t1.exon3;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 22845 23063 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 22567 22644 . - . ID=g13960.t1.exon4;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 22567 22644 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 22054 22314 . - . ID=g13960.t1.exon5;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 22054 22314 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 21730 21825 . - . ID=g13960.t1.exon6;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 21730 21825 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . exon 21411 21510 . - . ID=g13960.t1.exon7;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . CDS 21469 21510 . - 0 ID=cds.g13960.t1;Parent=g13960.t1 NODE_427_length_23939_cov_40.6542 . three_prime_UTR 21411 21468 . - . ID=g13960.t1.utr3p1;Parent=g13960.t1 #PROT g13960.t1 g13960 MERWEKKQAEERARIAASSVPSSALTATVPQPVPTAHVTTAPALQSAVSAAPVHSNGWSVVDEDAGGNSMKSTQPPDSQQGLPSSAPPVASLAVSIASSLASEPLVTRPEHTDMSKLACILCQRQFKSAEILEKHQLMSDLHRQNLQKERDDLIAKAALLDSSDEGPDGPKYRDRAKERRQMYGQPEKPSGLARVPAKFLKQAPGPVQAEAVVAFVQPTKEGIGADNIGNQMLQKMGWTEGSGLGRNAQGIVNPIEAVQRSAGAGIGAEGASYGASAGDSYRDSILKLARDRYTRLEKDES* # PASA_UPDATE: g13959.t1, single gene model update, valid-1, status:[pasa:asmbl_7175,status:3], valid-1 NODE_427_length_23939_cov_40.6542 . gene 20115 21230 . + . ID=g13959;Name=g13959.t1 NODE_427_length_23939_cov_40.6542 . mRNA 20115 21230 . + . ID=g13959.t1;Parent=g13959;Name=g13959.t1 NODE_427_length_23939_cov_40.6542 . five_prime_UTR 20115 20237 . + . ID=g13959.t1.utr5p1;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . exon 20115 20362 . + . ID=g13959.t1.exon1;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . CDS 20238 20362 . + 0 ID=cds.g13959.t1;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . exon 20602 20788 . + . ID=g13959.t1.exon2;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . CDS 20602 20788 . + 1 ID=cds.g13959.t1;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . exon 21014 21230 . + . ID=g13959.t1.exon3;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . CDS 21014 21094 . + 0 ID=cds.g13959.t1;Parent=g13959.t1 NODE_427_length_23939_cov_40.6542 . three_prime_UTR 21095 21230 . + . ID=g13959.t1.utr3p1;Parent=g13959.t1 #PROT g13959.t1 g13959 MEWFHSLRDSVTQNVSSVPADAWIASLVATILFYVVIAWTLRYILRVIFSPILAFIFLSWGALSLGNVTGAWIARNHQHIIADPLYATLSKYGFRVEVTATSVLLLANVMAVWCGVIKIAESLKRRPRSS* # ORIGINAL: g13957.t1 original gene structure, not modified by PASA NODE_427_length_23939_cov_40.6542 AUGUSTUS gene 3319 15720 . - . ID=g13957;Name=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS mRNA 3319 15720 . - . ID=g13957.t1;Parent=g13957;Name=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 15687 15720 . - . ID=g13957.t1.exon1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 15687 15720 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 15240 15421 . - . ID=g13957.t1.exon2;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 15240 15421 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 14669 15094 . - . ID=g13957.t1.exon3;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 14669 15094 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 13828 14304 . - . ID=g13957.t1.exon4;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 13828 14304 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 13453 13587 . - . ID=g13957.t1.exon5;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 13453 13587 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 12865 12948 . - . ID=g13957.t1.exon6;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 12865 12948 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 12297 12671 . - . ID=g13957.t1.exon7;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 12297 12671 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 11527 11912 . - . ID=g13957.t1.exon8;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 11527 11912 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 11015 11210 . - . ID=g13957.t1.exon9;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 11015 11210 . - 1 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 10707 10812 . - . ID=g13957.t1.exon10;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 10707 10812 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 10112 10309 . - . ID=g13957.t1.exon11;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 10112 10309 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 9510 9906 . - . ID=g13957.t1.exon12;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 9510 9906 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 8801 9037 . - . ID=g13957.t1.exon13;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 8801 9037 . - 1 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 6563 8465 . - . ID=g13957.t1.exon14;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 6563 8465 . - 1 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 6100 6202 . - . ID=g13957.t1.exon15;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 6100 6202 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 5720 5820 . - . ID=g13957.t1.exon16;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 5720 5820 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 5321 5407 . - . ID=g13957.t1.exon17;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 5321 5407 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 4715 5053 . - . ID=g13957.t1.exon18;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 4715 5053 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 4399 4570 . - . ID=g13957.t1.exon19;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 4399 4570 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 4035 4154 . - . ID=g13957.t1.exon20;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 4035 4154 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 3720 3823 . - . ID=g13957.t1.exon21;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 3720 3823 . - 2 ID=cds.g13957.t1;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 3319 3399 . - . ID=g13957.t1.exon22;Parent=g13957.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 3319 3399 . - 0 ID=cds.g13957.t1;Parent=g13957.t1 #PROT g13957.t1 g13957 MAEAADIVRKIGHASRLVRGRALASLSFKIELGLIEIIAIAYDSTLFANILECLNLGDDASPVLDVLSKLLMNAQCRRTFSSIGGFAFLRGFAEDCPSELLATIDTLISLDASPDSLTANTPFFSADGVCDDDNKAHATFITVPSMATDIDVDDAAVDALTADAVRDELSDRRHDGDVLTPSVDECVLRCGRVEAFVERDSIGSEDDRLQPALEDAIAVVCDAVADYAGVLCYRGLRAYERLIMRALGTLSLSAVGNDAVEGSATHGIECAVVDITIRSLALARDCLSTQDRWDVATTLVCCANLVVNAIPQRHRDGFCSIASLACELAHCISLCFGNGAMSGSRTHPSDVAAMLSGLSDCAISLAKIGAFVGLPATSTNHVTSVMATVIAHADMFNGSILISRAHEWLTICDAAASETLERISVISRSYAQSRLELLSRPDTFVERYRRGEDDLLTPVLEGFRHVHDVILAAAVARTGIEPALCAMLQHPTAYVRLAAVTAIEDTASTMHRMGLSRARTSGKDDADQMLGDALSTCGFTAASSREMRRAIFARDVVFSLCCWSLCDENESVRLITRSVVSLLRAIDPLSLRHAIFPLAAFAEFSHETDQNNTDGHSARPAALTSTLLRSQSLRDSGKRRNRWIDGKRAIIDTHPDRTLTQNVARDAIEAALLPGNAGETDDTAERVTACAIMLLCADEGTRLYGWHCLCAIVDPTALPADTDSDATAAPTSTTQATSAPWNRLIKGHGLSDGDESKRDASTVLQSVVRDATALCRVLVNDSADTFMRKTAMSQLVGIAHFPGASQCALSHGVVHVIIDCLCASDDTSASLWQPALAALSRMCAADIGVLEAVKVHASRLVWGLLTNVLSCAQTSLHRDANRLVALLCVHRAADGADEALSPATKAPKMESPSAVVVALPSSIRSAFAFASGVSVRTYSRDIPLPLDSNPDTSTPGFSPGPLLSAVLLSSIEHEGSLSDTDPMRTIDSVATGTSLELLRFLTVLPQSENDRWLLAAAIDVIETSLWRLNKARVVSARHTFSGEARSNPTKFEGWAISTVAEHIPPILAMDLRKDASTRALIVSALWLVGTTASACPLEVFASLWGLTASDDSDWPSHKQYRHRHEQQQQHQHQKQELHLARSLAELLRRALRHSPLIVAQSTMGCIASCLARISAAAVAIADVTAHSVAQIRVYATTCHLCSHASLFSSPLESVLRMAAAGVLWPAHVKALAGLALADVAACAFAARTETNVPGGRVHCDSGGAHEIPSIGWIRSLVADVDPVVTSAGYAAIASLSRVIERVTCGESNAIGPLYAVATTLATLRGHVDGALAVFADADADRDVRLSAGSAVLAVLRVLSTVGVSVAHMERPTEGQKERLKERLKERLKEEASHGTDGDNGECHAESDDGRHSKRTGGDDVPMASADHFKRVAVCVCRMLQHVTADAEMTSCAMSIVSACLEANGTSTSSGLQEAGSGVSVTADSVALLRATVDTPARIARSVRHSIAIAAIDHVMQGYLRVSAYGGEGDAGELRVRTATLSLALCAMQTSVEDRSVLVDWREMCDFAFASLGIATDFISARAPVPCRTDANDAIATEAGGLFEAALSYVVTALSHSPSSGSCAAVNSAARHMSQCENAILSALGSGDKGAIHWRSRDASRGRGQNASLWSLAASLVYEMHMRMRPTWARCDVLLATLVNRFCRMHRGMIKEKTVDDNAQECTNEAGEALSVAVSLVAQSGQGAKNIDAVTAAILSLCKRATSALSSSDGTKQKRQGHVTSSTHSREVALVSVARCLDCVRACMSALADEVPDLHAIIEAASPFVPVTWQQARASPAESRASLACLHLLASVTCGRPDARAVVVSATAGVLGGVSVAAGGSVAQRLLRLSVDAEKTPQGHYAALHGVIANLALCSEMVGEMVKASYLPTALQRGIVDISGSHASAHAKSARQLVRAEWALKIAANASFTTDGAKQITRVADILEHLVDAANRSPSLNTSCVLLLRNLAFIPENRAAFSSNERLLLQLVTWLCEGSALVRSLAASSLWALVSHSEKLKSAVRKTGLSIEMLENASALLADYG* # ORIGINAL: g13958.t1 original gene structure, not modified by PASA NODE_427_length_23939_cov_40.6542 AUGUSTUS gene 16383 19582 . - . ID=g13958;Name=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS mRNA 16383 19582 . - . ID=g13958.t1;Parent=g13958;Name=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 19478 19582 . - . ID=g13958.t1.exon1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 19478 19582 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 18998 19357 . - . ID=g13958.t1.exon2;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 18998 19357 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 18674 18807 . - . ID=g13958.t1.exon3;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 18674 18807 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 17513 18432 . - . ID=g13958.t1.exon4;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 17513 18432 . - 1 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 17308 17399 . - . ID=g13958.t1.exon5;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 17308 17399 . - 2 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 17032 17142 . - . ID=g13958.t1.exon6;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 17032 17142 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 16735 16830 . - . ID=g13958.t1.exon7;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 16735 16830 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS exon 16383 16535 . - . ID=g13958.t1.exon8;Parent=g13958.t1 NODE_427_length_23939_cov_40.6542 AUGUSTUS CDS 16383 16535 . - 0 ID=cds.g13958.t1;Parent=g13958.t1 #PROT g13958.t1 g13958 MAHPAVAHVRARFAAQGISLRNEWLDGYVDHLRMQNTVAANTSAEAVYGHVYRKWLEESIERSTLPGGVPADMGAAEIIGGNGGKPAVLQIDFASDVGESAFSQLETVKNKGELPSHRSANRALLLKMTDGDNSILGFEYLPLPGISVSIPPGTKIEVRNAKVARGIVLLGPENVRVLGGNVEELSHNNNYKHILMKRLGIEPSPAENDGNEDEVRLARALPSQQSPVRQPRPHALPPQQQQQQQQPVRLQKQPINRVVSEGNDDGDEFEEVDDAILNALAAAESDVLDEPRRPSAADKNRGIAAARQAQSVKEAPEVAVRHRQPAASLLPKAQALPANTRRDIVDAVDLTADEPVAPPVIARKVVATGIANPYAKRAVVDGGVSGRAAAAAVSVPVSVPSSREVHRNPRREQSNSDDFDGMDDANLLEAMMMDEEDADVIDIRGVTHSTASGTAGRSGSSQQQPQQHRQPQQQQQQQLQERASLRVKRSASDAFGDSADNRGSVKESRLLLKPYAHLSDVVEEGATVSKTMLVRVKGYVRHLSSNVRPSQSGYELEAHIDDGTAVVCVALSDTVVAGMARMPSAEFRALLKQGKRDEAAASRASEVLSRIKNAALRMEGVFVCELPGKDGRPLVVRVERPTEGDRIALQQRVAMS* # ORIGINAL: g7131.t1 original gene structure, not modified by PASA NODE_4036_length_2303_cov_34.7558 AUGUSTUS gene 128 2086 . + . ID=g7131;Name=g7131.t1 NODE_4036_length_2303_cov_34.7558 AUGUSTUS mRNA 128 2086 . + . ID=g7131.t1;Parent=g7131;Name=g7131.t1 NODE_4036_length_2303_cov_34.7558 AUGUSTUS exon 128 2086 . + . ID=g7131.t1.exon1;Parent=g7131.t1 NODE_4036_length_2303_cov_34.7558 AUGUSTUS CDS 128 2086 . + 2 ID=cds.g7131.t1;Parent=g7131.t1 #PROT g7131.t1 g7131 PSVTFASAISLVDSSANISHCDFRNIRSSAMARGGGALYAYAEMLPAIVSVANSQYINCTTYTVYSVYSSSRGGNVYVGGIASLFVTDSVFRWCSSLFGGAIFIADSARLDVRHTDFTDCTSGMGGGAIYAVNGGSEYPQVKLFKANFDRCRCLSGSGGAVSLPIAASLEVTSSLFINCLALGGGGVFADVALPAASNVAIINSSFVNCTAQSFGGAMVLSGPSEVTEPGADQNPGEFDLFPNGNGLPDGPVMSNVVFNQCTATFGGGLMVNGGAQVTVLKSYFLENTGDFGAGGYFTDSSIVTLTDVMWAENAAGSGGAFAVAVSSVVMATDIVIIGCRALEDGGAIYVGSSSQLNITDAYMMYNFAEGNGGCLSLANKGTVFVRNFVAIANFARQGGGCFSSQTSTQMTLMDGSVNYACTAGSGGGLWASGNSLTVVSNVSFSRNNAVNGGGVWTSVKAKMLISNSTFTLNTADGMGGALTLTGASMTTCVNVVVNNNTALTDGGGLYVADTAYVHMESSSVAFNRADRYGGGISASGYDPTSGSSGCMDSVNKGYNQSLALLLSVLPNNQASLDSVVANMEALIFADRGSLIVALVSLVRTVVSHNHAVVGGGVQLISAAMYANDTVIMKNSAAQDGGGLYATQLIVPA # ORIGINAL: g1989.t1 original gene structure, not modified by PASA NODE_3995_length_2385_cov_35.7212_potentialcontaminant AUGUSTUS gene 913 2385 . + . ID=g1989;Name=g1989.t1 NODE_3995_length_2385_cov_35.7212_potentialcontaminant AUGUSTUS mRNA 913 2385 . + . ID=g1989.t1;Parent=g1989;Name=g1989.t1 NODE_3995_length_2385_cov_35.7212_potentialcontaminant AUGUSTUS exon 913 2385 . + . ID=g1989.t1.exon1;Parent=g1989.t1 NODE_3995_length_2385_cov_35.7212_potentialcontaminant AUGUSTUS CDS 913 2385 . + 0 ID=cds.g1989.t1;Parent=g1989.t1 #PROT g1989.t1 g1989 MPSEEPPSSYYLYTNYNARLIESRISENAFVFESVEFNKKVLAKATFFLTMTMKSRRPAHECVDVVLYRGAGGLGNAVQKGIPEQSRPPSKPSPFVTHSVALSTAHLGTERRLSGTPLRQLTQACTGEDHLGDNAISDPATLLELDMDEIDSSLQNDFLNLDAALPMFSGLDGPSPASTQLLASKRAYVAQFNGQHLHQQQQQQQQHQLQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQMIGPGGSTGEFSLPQPQDLPIISLGNGGATGGAYADLRLQQPRPQSQQQTQNQAGNLAQAFHFVSAINSGGVTGPSAQQQHQQTQPQQQTQRGASARGGARGAGGAGSRGGRNAAASGHAPAVPETPSSNGGIRSAPRGDGVQTSAPGSTSASQAALLALQNPDENMRMRVAEIERQLQSMHERSFQMQQMEQLEQQRAFFQTKAAQQNAPFNVGDAKGYHVALQQQQQQQQQQQQQQQQQQQQQQQQQ # PASA_UPDATE: g10806.t1, single gene model update, valid-1, status:[pasa:asmbl_8435,status:12], valid-1 NODE_600_length_20377_cov_42.2613 . gene 18083 20151 . - . ID=g10806;Name=g10806.t1 NODE_600_length_20377_cov_42.2613 . mRNA 18083 20151 . - . ID=g10806.t1;Parent=g10806;Name=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 20052 20151 . - . ID=g10806.t1.exon1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 20052 20151 . - 0 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 19901 19930 . - . ID=g10806.t1.exon2;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 19901 19930 . - 2 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 19669 19780 . - . ID=g10806.t1.exon3;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 19669 19780 . - 2 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 18893 19574 . - . ID=g10806.t1.exon4;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 18893 19574 . - 1 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 18491 18785 . - . ID=g10806.t1.exon5;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 18491 18785 . - 0 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . exon 18083 18295 . - . ID=g10806.t1.exon6;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . CDS 18219 18295 . - 2 ID=cds.g10806.t1;Parent=g10806.t1 NODE_600_length_20377_cov_42.2613 . three_prime_UTR 18083 18218 . - . ID=g10806.t1.utr3p1;Parent=g10806.t1 #PROT g10806.t1 g10806 MYARIILIAALVAAASAFPAWRDGADGEGTNWAVLVAGSNGYYNYRHQADIYHAYQILKKNGYPDSNIILFHYDDIANNDANPQKGVVINKSGGPNNYVNIPKDAYTGDLVTPDNFLKVIKGDFAGLKGIGSGKALNSTAKDNVFINFSDHGATGLIAFPSSYLYAKDLIDAINYMHTNNMYKQLVLYIEACESGSMFENLLPTGINAFATTASNAEESSYACYYDDTFQTYLGDVYSVNWMENSDSTDITTETLQQQFLFVQNETTTSHVMEYGELDWTTEPVSTFLAFPKAKVPAPAPKMPSRHPRMDAVDSRDVVLETLKRRLAGVANEDEARAIEVEIQAENQRRMEHDVAFNRVMSNLVGHAKVTQMYATRSVPRDFDCLRNVLEHFETTCFKLSDYSLKYVYSLVNLCEAGFAVDSIKQAIVNAC* # ORIGINAL: g10801.t1 original gene structure, not modified by PASA NODE_600_length_20377_cov_42.2613 AUGUSTUS gene 6727 7920 . - . ID=g10801;Name=g10801.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS mRNA 6727 7920 . - . ID=g10801.t1;Parent=g10801;Name=g10801.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 6727 7920 . - . ID=g10801.t1.exon1;Parent=g10801.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 6727 7920 . - 0 ID=cds.g10801.t1;Parent=g10801.t1 #PROT g10801.t1 g10801 MRATEIISTFVSGGGSGGSAGTNKPATPLGFVIALVRILRALLLALNSVYVAFSYTCFYVLLRPTLGLISPTIFWNIEAQLFQTALAIVASWLFMGDVDLIETVETESVFEEPSVLIANHQETGDVAVLMGAAVGNSVAGRMTWIMDSLFKFTQFGLVSAAHGDLFVQEGRRHRDSSVKEVNKLLRRRFASRRRMWCVIFPEGGLLWKRRAGSHKFAREHNLPILNHVALPRVGAFKATVDAIRHDVKSVVDVTIGYKKDRPLTMVDVLTAALGKYPVHLHYRRFDIASVPNDTEGMTQWLYDRFVEKERLLEEFYATGSFVSGNVAKGRKGSGSAPHVPVATGPASASASASALHGRREALLRFPPWYLVAIQLFWATTAFAWYSLLCRTFAAVRA* # PASA_UPDATE: g10800.t1, single gene model update, valid-1, status:[pasa:asmbl_8433,status:3], valid-1 NODE_600_length_20377_cov_42.2613 . gene 880 6105 . + . ID=g10800;Name=g10800.t1 NODE_600_length_20377_cov_42.2613 . mRNA 880 6105 . + . ID=g10800.t1;Parent=g10800;Name=g10800.t1 NODE_600_length_20377_cov_42.2613 . five_prime_UTR 880 1130 . + . ID=g10800.t1.utr5p1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 880 1164 . + . ID=g10800.t1.exon1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 1131 1164 . + 0 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 1376 1437 . + . ID=g10800.t1.exon2;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 1376 1437 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 1556 1702 . + . ID=g10800.t1.exon3;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 1556 1702 . + 0 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 1829 1937 . + . ID=g10800.t1.exon4;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 1829 1937 . + 0 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 2228 2313 . + . ID=g10800.t1.exon5;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 2228 2313 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 2532 2658 . + . ID=g10800.t1.exon6;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 2532 2658 . + 0 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 2998 3108 . + . ID=g10800.t1.exon7;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 2998 3108 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 3320 3400 . + . ID=g10800.t1.exon8;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 3320 3400 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 3670 3727 . + . ID=g10800.t1.exon9;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 3670 3727 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 3928 4990 . + . ID=g10800.t1.exon10;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 3928 4990 . + 1 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 5191 5260 . + . ID=g10800.t1.exon11;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 5191 5260 . + 0 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . exon 5531 6105 . + . ID=g10800.t1.exon12;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . CDS 5531 5637 . + 2 ID=cds.g10800.t1;Parent=g10800.t1 NODE_600_length_20377_cov_42.2613 . three_prime_UTR 5638 6105 . + . ID=g10800.t1.utr3p1;Parent=g10800.t1 #PROT g10800.t1 g10800 MADVSGTDDSDVEAGPLIKNGYLYLRVGTLMKNWERRRFVLEEGKLYYGAQGDPYKLKTLVIDSTSEVKEHDVGKPNSWEMSFQGQTLYVHANSLAEKLEWLKVLLLQVSKQSSKTSVLKKDNAGHQLKICNYMTPTDCDMCGKLLWGLVRQGLKCEGCEFNFHQKCVNKGNLPGCVLFYNSKSAGFEGDTTHHFKAIDPKTNELVECDFCSHNIAGSEVRLVCGVCEYTCHKKCFSSVATACVKDQITNIPGLPPGWELVIDDDGRKIYVNHITMETAWVTPVEELRYNAGDNDRQSPICVDEESPYSAPWPTISQRRAEQNTRAVPAPIAKPIAVVATNSAKAPGESLYDVVIPRLRTPSAEQAEGSMLASATAAMEATPPTPAPISPRGQHVATEYILPNAHPNRVRRGSDVSPSMNEMSPMGARRSSDASSSGGPPKPRRPSDVELEQAGFAVQNAPLSTVAELPTTAAPPNGSDAPSVYEVLAPFTRVVPQVQQQQQQEQPQQQQAAPSVLAEQTVLEKKLAPPVPFRPRKDTGDSGSAVESPASQRARSEASSASASAAASLGVSPVITPKASPPVPKKAIRGVGFAVAPAGAGSPTVSTSAPPPPSYNKLRKSFKFHPKMFAGAPTEKRDSTSEAKSSFDTPLVVVKTLENPTKDRVGLGPKRRPPTRKPREDSGDN* # PASA_UPDATE: g10803.t1, single gene model update, valid-1, status:[pasa:asmbl_8434,status:12], valid-1 NODE_600_length_20377_cov_42.2613 . gene 11231 13893 . - . ID=g10803;Name=g10803.t1 NODE_600_length_20377_cov_42.2613 . mRNA 11231 13893 . - . ID=g10803.t1;Parent=g10803;Name=g10803.t1 NODE_600_length_20377_cov_42.2613 . exon 13830 13893 . - . ID=g10803.t1.exon1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . CDS 13830 13893 . - 0 ID=cds.g10803.t1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . exon 13495 13720 . - . ID=g10803.t1.exon2;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . CDS 13495 13720 . - 2 ID=cds.g10803.t1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . exon 13076 13334 . - . ID=g10803.t1.exon3;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . CDS 13076 13334 . - 1 ID=cds.g10803.t1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . exon 12298 12894 . - . ID=g10803.t1.exon4;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . CDS 12298 12894 . - 0 ID=cds.g10803.t1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . exon 11231 12067 . - . ID=g10803.t1.exon5;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . CDS 11654 12067 . - 0 ID=cds.g10803.t1;Parent=g10803.t1 NODE_600_length_20377_cov_42.2613 . three_prime_UTR 11231 11653 . - . ID=g10803.t1.utr3p1;Parent=g10803.t1 #PROT g10803.t1 g10803 MSNSCILFPYHISRGACDFAQSSKMVLIEAVVLLLTVVSAYAAYEQHSLWRKRKNLPGPSVTPPFFGTIFHMIKRPFEYYDIQEKYGPISWNCLVGKFVIFSADLEATRKVFANTADSFRLILTLGAKRILGDNNIAFMNGPPHKALRKRLLPLFTRKALRVYLEIQEREIREHIDQWLRMPKPIEMRPLARDLNIVTSTNVFVGPYMTSERRETFAKLYNVMNEGMLAFPLNLPGTTLWHAIRARGKIVEILVECVQKSRERMTGGESSQCLLDVWMEAVENDKNKDGETAADPAAGEVDGSSETTKEPEFDETDEDIALHVLDFLFASQDASTSSIVWTCTLLAENPDVLEKVREEQARLRPDDAPFNPEECDKMVYTRQVVKEILRFRPPATMVPHIAVKDCPISNDYSVPEGTIVLPSIWASHFQNFTDAQKFDPERFSPERREDVTYAKNFLAFGAGPHMCLGREYAMNHIMAFVGLWATKIDAKRIRSPGCDDIIFLPTIYPADGCVIEIAAH* # ORIGINAL: g10802.t1 original gene structure, not modified by PASA NODE_600_length_20377_cov_42.2613 AUGUSTUS gene 8755 10827 . + . ID=g10802;Name=g10802.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS mRNA 8755 10827 . + . ID=g10802.t1;Parent=g10802;Name=g10802.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 8755 10827 . + . ID=g10802.t1.exon1;Parent=g10802.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 8755 10827 . + 0 ID=cds.g10802.t1;Parent=g10802.t1 #PROT g10802.t1 g10802 MRIHPVALSLKARRRRTSPLLLKEIEEKKAACRNLRDPKERREKVKEIRGLLADAGLRKYSYRDNKRGVWVRPERRTTKDAYYFTMKISEAGDAGDARKAYEIFDDMIANDTYPKPKVFNALIDAAGKAGWGRRALRTFIDMRKRRMPPDQSTFTSLFTACANNAGGPLVDDARKLRTTMLKYADANHAVLNAYIMVFAKAGRIADAFAAVAEEVELPDWPNSRTCAIIAAGCRTESDRKLFAEATLTKKHADVRVWNSLLKAAVEGTVNVSPGPADNATKTIAGAAGSKGVPVKASAPKTHPSLADSHMAVQKAALSVLSEMVDAKVAPTIHTFQTLLGGHLGAGRSVVGLSPELVANAVRESNISVDIGFVNGLILALGRRNRFREAEELFDVVTADSKLKKRGSDNANTTNRAEAAAGSSSSSSSERKMASSSSLQSRQKFADLPGISHVDADLFTCKAIVSVCARSRNVQLGERALNYARKRGFAMSVGLFGALLKAACAANDGAAAARTILSCKFAHIKVDRTMLSQLSERANASEEFSAAIAPILLEVVGISIDMLKAASSHSSVYGVKGGVASPMSRSSSADDVDDDGFEADDADDADDAEDHDDRKYAERGRPRGHVPKGGRHEEGVPLYRQEKGVPLYRNILLARTTAEDHPVATKAEAITAKRDASRTPAAQRRTRRPST* # ORIGINAL: g10804.t1 original gene structure, not modified by PASA NODE_600_length_20377_cov_42.2613 AUGUSTUS gene 14775 16023 . - . ID=g10804;Name=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS mRNA 14775 16023 . - . ID=g10804.t1;Parent=g10804;Name=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 15793 16023 . - . ID=g10804.t1.exon1;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 15793 16023 . - 0 ID=cds.g10804.t1;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 15458 15626 . - . ID=g10804.t1.exon2;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 15458 15626 . - 0 ID=cds.g10804.t1;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 15235 15304 . - . ID=g10804.t1.exon3;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 15235 15304 . - 2 ID=cds.g10804.t1;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 15028 15137 . - . ID=g10804.t1.exon4;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 15028 15137 . - 1 ID=cds.g10804.t1;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 14775 14905 . - . ID=g10804.t1.exon5;Parent=g10804.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 14775 14905 . - 2 ID=cds.g10804.t1;Parent=g10804.t1 #PROT g10804.t1 g10804 MTEVQSAQPQPPHMRRRSSSMQDIQKRLVTGVGGLRMIAQEDEDASPFTLEEPRWMDDMSLNMCSYCKSSFGIFNRRHHCRRCGVLLCSSCCDTLMPLPRLGYVDPARVCVKCIPTASRESEFFDRHLKLLLKGSFFRAHRDGKTGIVKMVLLPNHRYLKVEDAESGEPNFKCLIAVDRISEVQDVRKEPDGAGVRIQTFIIVGDNTNLELEAKTRDERVSFTAALREALRLLPRA* # ORIGINAL: g10805.t1 original gene structure, not modified by PASA NODE_600_length_20377_cov_42.2613 AUGUSTUS gene 17116 17790 . + . ID=g10805;Name=g10805.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS mRNA 17116 17790 . + . ID=g10805.t1;Parent=g10805;Name=g10805.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS exon 17116 17790 . + . ID=g10805.t1.exon1;Parent=g10805.t1 NODE_600_length_20377_cov_42.2613 AUGUSTUS CDS 17116 17790 . + 0 ID=cds.g10805.t1;Parent=g10805.t1 #PROT g10805.t1 g10805 MTLIVGVKTCIERVRATKLHEHPALQPVRAAAIAALPVFRPYVQRLASDDVVRAVNSFVVDHPVLTTYLCILGAFTAFPFACFFGFVLATLIGAAITFIIVESSLLLGALLFLTAVVCGCVVAAAGATAFAVVAYHAISLSLRIARDLFGINLLANVQYDLAANCKEQSSTFLTTSVESVVPPKQQVEDIAATEVVSLVAPVPSKQSIDSVVQDTVDVVAEGNA* # ORIGINAL: g14346.t1 original gene structure, not modified by PASA NODE_2548_length_5925_cov_47.8834 AUGUSTUS gene 2640 3434 . - . ID=g14346;Name=g14346.t1 NODE_2548_length_5925_cov_47.8834 AUGUSTUS mRNA 2640 3434 . - . ID=g14346.t1;Parent=g14346;Name=g14346.t1 NODE_2548_length_5925_cov_47.8834 AUGUSTUS exon 2640 3434 . - . ID=g14346.t1.exon1;Parent=g14346.t1 NODE_2548_length_5925_cov_47.8834 AUGUSTUS CDS 2640 3434 . - 0 ID=cds.g14346.t1;Parent=g14346.t1 #PROT g14346.t1 g14346 MASMAISIGIQVAIGGIKQARTKSGNGGRAQELGKRLENVVELLKVLQAKYGDNALPAIICPDIEAISVVIQETVDYISKAEDENAVSGFFNASSHEENFYRLDKTITACVSNLTVHCIELMMALPVGITHPSAATTMTTQQRKSPIPSRMNDPFDDLSMYATAQEYQRPPAQVKFNDTPTYTSAMPSRAPTQPQYANARPVSPATVNAAPSASSANAGGFAAAVGSSAVPAKAVADTQQKRVPFRLTRKLYGRIESMVKRVIE* # PASA_UPDATE: g14345.t1, single gene model update, valid-1, status:[pasa:asmbl_4534,status:12], valid-1 NODE_2548_length_5925_cov_47.8834 . gene 790 1781 . - . ID=g14345;Name=g14345.t1 NODE_2548_length_5925_cov_47.8834 . mRNA 790 1781 . - . ID=g14345.t1;Parent=g14345;Name=g14345.t1 NODE_2548_length_5925_cov_47.8834 . five_prime_UTR 1707 1781 . - . ID=g14345.t1.utr5p1;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . exon 1590 1781 . - . ID=g14345.t1.exon1;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . CDS 1590 1706 . - 0 ID=cds.g14345.t1;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . exon 1274 1338 . - . ID=g14345.t1.exon2;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . CDS 1274 1338 . - 0 ID=cds.g14345.t1;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . exon 790 950 . - . ID=g14345.t1.exon3;Parent=g14345.t1 NODE_2548_length_5925_cov_47.8834 . CDS 790 950 . - 1 ID=cds.g14345.t1;Parent=g14345.t1;3_prime_partial=true #PROT g14345.t1 g14345 MAAKEWKIHVKKDIEYDILQECDIDGVAECMCVTFPHTEVLARAVSISEEEFRPFARAFAKVLADQKLSIVARALPTRKVVGYIATEDYAAPAGSDELVQAIHPKLQPIFGLME # PASA_UPDATE: g2703.t1, single gene model update, valid-1, status:[pasa:asmbl_7963,status:12], valid-1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . gene 121 946 . - . ID=g2703;Name=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . mRNA 121 946 . - . ID=g2703.t1;Parent=g2703;Name=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . five_prime_UTR 945 946 . - . ID=g2703.t1.utr5p1;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . exon 909 946 . - . ID=g2703.t1.exon1;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . CDS 909 944 . - 0 ID=cds.g2703.t1;Parent=g2703.t1;5_prime_partial=true NODE_5254_length_946_cov_47.1447_potentialcontaminant . exon 713 815 . - . ID=g2703.t1.exon2;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . CDS 713 815 . - 0 ID=cds.g2703.t1;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . exon 443 550 . - . ID=g2703.t1.exon3;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . CDS 443 550 . - 2 ID=cds.g2703.t1;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . exon 121 211 . - . ID=g2703.t1.exon4;Parent=g2703.t1 NODE_5254_length_946_cov_47.1447_potentialcontaminant . CDS 121 211 . - 2 ID=cds.g2703.t1;Parent=g2703.t1;3_prime_partial=true #PROT g2703.t1 g2703 EKMFSLRSSVARMSMPALVRAYAEAAATKTTSINSITKVVEKSTSSGHVNRVSLSGYVASPVKRVSDTLHRVRVGTVNAYKNKDQQLVEKTQFHSVLLSGASFDKVAQFLVP # PASA_UPDATE: g12071.t1, single gene model update, valid-1, status:[pasa:asmbl_5922,status:3], valid-1 NODE_3358_length_3658_cov_42.8649 . gene 164 2664 . + . ID=g12071;Name=g12071.t1 NODE_3358_length_3658_cov_42.8649 . mRNA 164 2664 . + . ID=g12071.t1;Parent=g12071;Name=g12071.t1 NODE_3358_length_3658_cov_42.8649 . five_prime_UTR 164 237 . + . ID=g12071.t1.utr5p1;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . exon 164 714 . + . ID=g12071.t1.exon1;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . CDS 238 714 . + 0 ID=cds.g12071.t1;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . exon 837 1064 . + . ID=g12071.t1.exon2;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . CDS 837 1064 . + 0 ID=cds.g12071.t1;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . exon 1308 2664 . + . ID=g12071.t1.exon3;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . CDS 1308 2474 . + 0 ID=cds.g12071.t1;Parent=g12071.t1 NODE_3358_length_3658_cov_42.8649 . three_prime_UTR 2475 2664 . + . ID=g12071.t1.utr3p1;Parent=g12071.t1 #PROT g12071.t1 g12071 MVNYKDAAARYDFSASEIDNLIAQFQSFDKDGNGSIDAAELSAVLKNLGEKASNDDVRAQIREVDTDHSGTIEWNEFLLVVDRLRKAKKEATAGFGKTVQQQAKVVTVGGSTDSTQHTFSEDEKQMFVAHINMELAHDKDIGDRIPINELDMSIFEAVKDGLVLCKLINYSVPDTIDERVLNIKKKLNNFEIVENQNVCINSAKAIGCNVVNIGCQDLVEGRVHLVLGLIWQIIKIGLLSKISLANHPELYRLLEDGETLEDLLKLPADQILIRWVNFHLKNAGSQKRIKNFSGDIKDSEAYTVLLSQLDPACTLAPLQESDLTKRAELVLQNADRLDPPCRKFVTPKAIVGGNPKLNLAFIANLFNFHPGLQPLTEEEKAALDDALFNSEGDREARAFALWMNSLGIDPFVNNLYEDLKDGLVLLRVFDKISPGSVNWDKVNKNTPITSKFKRLENTNYAVVIGKSLKFSLVGIAGADITDGSKMLTLALVWQMMRFHVLSILKSLSKDGKEVSEDEMIKWANETVRKAGKSSKMDSFKDSSLTTGIFFLDLMGGLKKGIVNYDLVTPGTSEADAKLNAKYAISIARKLGACIFLLPEDIVEVKPKMILTFVGALMAVGVAH* # ORIGINAL: g4693.t1 original gene structure, not modified by PASA NODE_2064_length_7866_cov_39.3295 AUGUSTUS gene 5184 7555 . - . ID=g4693;Name=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS mRNA 5184 7555 . - . ID=g4693.t1;Parent=g4693;Name=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 7424 7555 . - . ID=g4693.t1.exon1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 7424 7555 . - 0 ID=cds.g4693.t1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 7001 7097 . - . ID=g4693.t1.exon2;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 7001 7097 . - 0 ID=cds.g4693.t1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 6608 6678 . - . ID=g4693.t1.exon3;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 6608 6678 . - 2 ID=cds.g4693.t1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 6188 6316 . - . ID=g4693.t1.exon4;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 6188 6316 . - 0 ID=cds.g4693.t1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 5820 5935 . - . ID=g4693.t1.exon5;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 5820 5935 . - 0 ID=cds.g4693.t1;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 5184 5613 . - . ID=g4693.t1.exon6;Parent=g4693.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 5184 5613 . - 1 ID=cds.g4693.t1;Parent=g4693.t1 #PROT g4693.t1 g4693 MEAVKGAVKDVSFTADVTCTPCNGAGTKSGTKPTPCKVCGGSGREGSMHGMFMFEMTCRKCAGLGHIITNPCETCRGVDDGVEMRVQQPNSRMPLTVRVRVQPSDVFHREDSNVSSMVPINFALAALGGTVRTPGLYGDLEVKVPEGTQNGDRLRLAKRGMKKLNSNSNGDHYIVFDVQIPKKLTAHQKSLILQYAKEARITGIDGFDSAPSAATGSSASNASHSHSHSHSHSHPHGPTDPSSSSKTSGSTNGSASTSGSESSAKKASDAGSAGAAEGDSSKGLFGRLRDTFMGDTKGAASSSANPSSNSKDEDDNSKQQRASG* # ORIGINAL: g4692.t1 original gene structure, not modified by PASA NODE_2064_length_7866_cov_39.3295 AUGUSTUS gene 63 2814 . - . ID=g4692;Name=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS mRNA 63 2814 . - . ID=g4692.t1;Parent=g4692;Name=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 2669 2814 . - . ID=g4692.t1.exon1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 2669 2814 . - 0 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 2293 2437 . - . ID=g4692.t1.exon2;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 2293 2437 . - 1 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 1919 1984 . - . ID=g4692.t1.exon3;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 1919 1984 . - 0 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 1680 1739 . - . ID=g4692.t1.exon4;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 1680 1739 . - 0 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 1214 1467 . - . ID=g4692.t1.exon5;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 1214 1467 . - 0 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 921 1039 . - . ID=g4692.t1.exon6;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 921 1039 . - 1 ID=cds.g4692.t1;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS exon 63 673 . - . ID=g4692.t1.exon7;Parent=g4692.t1 NODE_2064_length_7866_cov_39.3295 AUGUSTUS CDS 63 673 . - 2 ID=cds.g4692.t1;Parent=g4692.t1 #PROT g4692.t1 g4692 MGYRKGSNGRGGGRFAKSGERAPFSGKGNSSGFKGGRKGQPPVDENDPNAVENALREQQRQEAIARVEADDEMDTIFGFDRYRGSVDRLGWLVNMHPTSIVDQETRKLKSAVDYYFIQEDGGRFKATLAYSPYFFIAVQDGKEIEVDQYLRRRFEGTIENIEFVAKEDLDLVNHLVGLKKTYVKLSFASVQELLRVRKVVKSAVVKNADKKETGIAYEDILFTSSQMKSSSDASKSAAADPLDFIIDIREYDVPYHVRVAIDLDISVGHWFMVKYAQQTLVISRRDDLMERPDPVILAFDIETTKLPLKFPDSKHDQVMMISYMIDKQGYLIINREIVSEDIENFEYNPTPEFEGPFIVINEPDEASLLRKWFEHVRATRPAIFVTFNGDFFDWPFIEARAAFHGISMRKEIGFAPDAAAEYKSRHGIHMDAFRWVKRDSYLPVGSQGLKVCVCFGSGAVPPADNAL # ORIGINAL: g3639.t1 original gene structure, not modified by PASA NODE_1894_length_8698_cov_43.2179 AUGUSTUS gene 95 973 . - . ID=g3639;Name=g3639.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS mRNA 95 973 . - . ID=g3639.t1;Parent=g3639;Name=g3639.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS exon 95 973 . - . ID=g3639.t1.exon1;Parent=g3639.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS CDS 95 973 . - 0 ID=cds.g3639.t1;Parent=g3639.t1 #PROT g3639.t1 g3639 MASVASDASPAPRKVLQEREHMTFDGRPSHAQNSHTHPAGAAADAGAPHPTTHSTHSRAPSATTSKIGRYAPRISMSTAKVISQSTRTTLRNVGRRAGRILLKPEMVREMEKFHGKNGLLHPRSFMRLLWDMFILLEVIYTMISLPVTLAFYLDGLPHNFFIATSVLDVFLIIDVAINFRTGVEDKFSGKVDFDRKRVAMKYLKTWFFLDFVAIIPIDFIIELQGVAGSSAIRASRLLRVFHLVRILKLLRVFRLVRYMDRWERFITISSNVAQIFKLVFFIILFLHWEACIM # ORIGINAL: g3641.t1 original gene structure, not modified by PASA NODE_1894_length_8698_cov_43.2179 AUGUSTUS gene 3711 8431 . - . ID=g3641;Name=g3641.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS mRNA 3711 8431 . - . ID=g3641.t1;Parent=g3641;Name=g3641.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS exon 6237 8431 . - . ID=g3641.t1.exon1;Parent=g3641.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS CDS 6237 8431 . - 0 ID=cds.g3641.t1;Parent=g3641.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS exon 3711 6039 . - . ID=g3641.t1.exon2;Parent=g3641.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS CDS 3711 6039 . - 1 ID=cds.g3641.t1;Parent=g3641.t1 #PROT g3641.t1 g3641 MHALLKAVARIPAKVSQVTAIRSVTTAKSAPGIVDKHMTIELDDGRTLKGISFGAEKPISGELVFSTAMVGYPESLTDPSYRGQILVLTHPLVGNYGVPSDKEVDRFGIPTHFESNKIQVAGLVVADYAPEYSHWTATRSLSEWLKEHKIPAISGIDTRELTKICRERGTVLGRILPEGVTASSVPMDNPNLRNLVSEVSCKEPKTYNRGGDVKIVAVDCGIKNNIVRMLAEQGAEVKVVPWDHDLASESYDGLFISNGPGDPSRAQTLIANVKRALDGDRPIFGICMGNQILGMAAGLSTYKMKYGNRGHNQPAVNQQTGACLITSQNHGFALDAKGLPAGWEQYFVNANDGTNEGLVHSTKPFSSVQFHPEATGGPRDSTYLFGDFVSTVRAAKTKAALEILTGKHESAHKVASSAAAIKKASKSNASTKAPRKVLVLGSGGLSIGQAGEFDYSGSQCIKALKEEGVETILLNPNIATIQTGRDLADTVYFLPVDPAYVRHVVEKERPDGILLTFGGQTALNTGIRCEQAGVFADNGVRVLGTPIQTLITSEDRDLFARALGEIDQPVAHSVAAETVSDALKAAEHVGYPVIIRSAFALGGLGSGFAENESELRALATKSLSLAPQILVERSMKGWKEVEYEVVRDAENNCITVCNMENFDPLGIHTGESIVVAPSQTLTDHEYHMLREAAIKIIRHLGVVGECNVQYALNPATSEYCVIEVNARLSRSSALASKATGYPLAFVAAKIALGHSLPQLRNSVTRETTACFEPSLDYCVVKIPRWDLGKFNHVSREIGSSMKSVGEVMSIGRTFEEAMQKAIRMVDPSVDGFQPKRFADTDHVLRKPTDQRVFAIADAMFNKGYSVDKIHDMTKIDKWFLHKLDRIVSVDAQLKSCGVIGAVPNDLLKEAKIRGFSDRQIAKAVSSNEMDVRSSRKARGIVPFVKQIDTLAGEFPARTNYLYTTYNASSHDVSFGDKGIMVLGSGVYRIGSSVEFDWCGVGCIRSLRASGRKTIMVNYNPETVSTDYDECDRLYFEELSVERVLDIYDLEDCAGVIASMGGQTPQNMAMALHGAGVRLMGTSPLMVDAAEDRVKFSSLLDRIGIKQPAWAMLTSLEEAVAFSHRVSYPVLVRPSYVLSGAAMSVARSDAELNKCLSAAADVSPLHPVIITKFMEGAREIDVDGVAANGKLIAHAVSEHVEDAGVHSGDATLVLPSRDLTRDQLKEAKRIAEKVAAGLEITGPFNMQLLAKDGHISVIECNLRASRSFPFVSKTLGIDFIELATRAIVGDAVSAVDPMEKELPYQCVKVPQFSFTRLGGADPMLGVEMASTGEVACFGRDKHEAYLKALLSTNGFRLPKRAVMIGADALTNGAELVHVASQLRARGLKLYADDLAANAIQAASLPVTRLSIADGIDDVREKIVAGNIDMVLNLAAARAETRDDANYRLRRLAVDHGVPLITNAKCAVLFSDAFANASDDALAHPDVVSWSEYLEMGQPQTKKVASVAA* # ORIGINAL: g3640.t1 original gene structure, not modified by PASA NODE_1894_length_8698_cov_43.2179 AUGUSTUS gene 1433 2926 . + . ID=g3640;Name=g3640.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS mRNA 1433 2926 . + . ID=g3640.t1;Parent=g3640;Name=g3640.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS exon 1433 2926 . + . ID=g3640.t1.exon1;Parent=g3640.t1 NODE_1894_length_8698_cov_43.2179 AUGUSTUS CDS 1433 2926 . + 0 ID=cds.g3640.t1;Parent=g3640.t1 #PROT g3640.t1 g3640 MLQSPRLRCASAACEFVLRASVRGCPVAPPFSPLSLQHTLLALRVKDGRFFSHTLPSSATEAIAAMRSFTTSVRGDAISTETGKRRSLAMFADLFADAKRAYKESKHNTLKREGSAPRVNQSKASSKRPAVHQHYLEELRAYYLEHSHGPPVSVRNSSHFTVDEDRRIVELIKQGKGWTDIGSALGKSKDAILTRFQNSLDPRLHFGPFTAEEDAAIHAHVRERGEGKWAALSAKMKYTRSGCTLQARYRFTLQADVKKGSWSDDEHRRLLEGIVKHGRDWTAEAGHVGTGRTPNDFQYTATKALSSYDYASTVRGKHFTRDEDARLRIAVERHRRDWDKVLQFVPGRNGQQLMERYRKIIPLWMRVSYWPAARASVRALLRGDGHVESKLAAQFKDLDAAKGWVALELGMDDGSQVDWARVNEASGAERSAALDAVEKEIVPRVRVEEWKEGASAVWVPAWRWERPICAGRRAPIAAVAHHSHIKPFVAVSAEGDH* # PASA_UPDATE: g4498.t1, single gene model update, valid-1, status:[pasa:asmbl_4004,status:12],[pasa:asmbl_4008,status:12],[pasa:asmbl_4009,status:12], valid-1 NODE_2307_length_6775_cov_57.1525 . gene 271 2178 . + . ID=g4498;Name=g4498.t1 NODE_2307_length_6775_cov_57.1525 . mRNA 271 2178 . + . ID=g4498.t1;Parent=g4498;Name=g4498.t1 NODE_2307_length_6775_cov_57.1525 . five_prime_UTR 271 488 . + . ID=g4498.t1.utr5p1;Parent=g4498.t1 NODE_2307_length_6775_cov_57.1525 . exon 271 695 . + . ID=g4498.t1.exon1;Parent=g4498.t1 NODE_2307_length_6775_cov_57.1525 . CDS 489 695 . + 0 ID=cds.g4498.t1;Parent=g4498.t1 NODE_2307_length_6775_cov_57.1525 . exon 865 2178 . + . ID=g4498.t1.exon2;Parent=g4498.t1 NODE_2307_length_6775_cov_57.1525 . CDS 865 2178 . + 0 ID=cds.g4498.t1;Parent=g4498.t1 #PROT g4498.t1 g4498 MHGFNRPMDAVWTGASSNTTDSKVDSATMAPRNIPDVGVTNQAMPNQAQFAVTPQAVGKLAHIACGVCRRSHKGCDGRFPCGDCVKGGHADRCFYLPPKKKGRKRKEDKQREEKEAAEEQRRLSLGTPTSGDDFVLNDLADEIGRASAQLSTTMQQQQLHSHHQYQPHNPSPAPVARSAVGKARVRKGSLTRFSNGSENGSAGRSPALRRAATDSPVDLASESPAGVFHSATIRMGSDVAAKQAYQPPSTARLSSSAPPAQSKMMHSVPHKARLSIDTSDAVMVVPPPNRYAGQTSMYSYNMPPSGTITGMPPPFGGFGPLPDVSPRTAVRHIADQLMAETYEAGDTQLHHALVPQLQQQQQQLQQQQRHQYHQQQQQQQQQQQQQQQLQLQQQQHYLADQATTMAYYQQHGMGGDGFVMPYPVTSMGSTEMAMDIASLQSLRGFPPAVGMPLALIPSVPSTPRDQADNVPMFTQDYFMQTFGAAPDASTPRSVCKLEDYFNQQQR* # PASA_UPDATE: g4500.t1, single gene model update, valid-1, status:[pasa:asmbl_4007,status:3], valid-1 NODE_2307_length_6775_cov_57.1525 . gene 4549 6727 . + . ID=g4500;Name=g4500.t1 NODE_2307_length_6775_cov_57.1525 . mRNA 4549 6727 . + . ID=g4500.t1;Parent=g4500;Name=g4500.t1 NODE_2307_length_6775_cov_57.1525 . five_prime_UTR 4549 4646 . + . ID=g4500.t1.utr5p1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . exon 4549 4770 . + . ID=g4500.t1.exon1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . CDS 4647 4770 . + 0 ID=cds.g4500.t1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . exon 5183 5307 . + . ID=g4500.t1.exon2;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . CDS 5183 5307 . + 2 ID=cds.g4500.t1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . exon 5781 5846 . + . ID=g4500.t1.exon3;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . CDS 5781 5846 . + 0 ID=cds.g4500.t1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . exon 6129 6727 . + . ID=g4500.t1.exon4;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . CDS 6129 6434 . + 0 ID=cds.g4500.t1;Parent=g4500.t1 NODE_2307_length_6775_cov_57.1525 . three_prime_UTR 6435 6727 . + . ID=g4500.t1.utr3p1;Parent=g4500.t1 #PROT g4500.t1 g4500 METKSDATSLKGKERDSEDADTGSASGNDTQAVVAPVKAPEPIAAIHTGGIREDMVQTAVTFLRNPRVQQSPISKRTAFLKQKGLSDDEVHEALRRTGDSVPTDATRINALQPQAAAHAHTHAQSGHNAVVVPQSDSLATRLKDTLFAAIVIGGVGYGLSSWIGAHILPRLRKWLSGDSDERLERMELAILALKDSLGETGVCVCV* # PASA_UPDATE: g4499.t1, single gene model update, valid-1, status:[pasa:asmbl_4005,status:3], valid-1 NODE_2307_length_6775_cov_57.1525 . gene 2695 4072 . + . ID=g4499;Name=g4499.t1 NODE_2307_length_6775_cov_57.1525 . mRNA 2695 4072 . + . ID=g4499.t1;Parent=g4499;Name=g4499.t1 NODE_2307_length_6775_cov_57.1525 . five_prime_UTR 2695 2756 . + . ID=g4499.t1.utr5p1;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . exon 2695 2759 . + . ID=g4499.t1.exon1;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . CDS 2757 2759 . + 0 ID=cds.g4499.t1;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . exon 2932 3048 . + . ID=g4499.t1.exon2;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . CDS 2932 3048 . + 0 ID=cds.g4499.t1;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . exon 3744 4072 . + . ID=g4499.t1.exon3;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . CDS 3744 4016 . + 0 ID=cds.g4499.t1;Parent=g4499.t1 NODE_2307_length_6775_cov_57.1525 . three_prime_UTR 4017 4072 . + . ID=g4499.t1.utr3p1;Parent=g4499.t1 #PROT g4499.t1 g4499 MAKITKNVKPVKGGKKKTQLKFTIDCSRPVEDEIMDAAAFENFLQLRVKVNGKAGNLGDSVSISRDKTKINLTADNVQFSKRYLKYLTKKFLKKHQLRDWLRVVAVSKNAYELRYFNIEGDDEEAEDDAE* # ORIGINAL: g2060.t1 original gene structure, not modified by PASA NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS gene 850 4124 . + . ID=g2060;Name=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS mRNA 850 4124 . + . ID=g2060.t1;Parent=g2060;Name=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS exon 850 2394 . + . ID=g2060.t1.exon1;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS CDS 850 2394 . + 0 ID=cds.g2060.t1;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS exon 2644 3094 . + . ID=g2060.t1.exon2;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS CDS 2644 3094 . + 0 ID=cds.g2060.t1;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS exon 3214 3292 . + . ID=g2060.t1.exon3;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS CDS 3214 3292 . + 2 ID=cds.g2060.t1;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS exon 4010 4124 . + . ID=g2060.t1.exon4;Parent=g2060.t1 NODE_3013_length_4535_cov_21.537_potentialcontaminant AUGUSTUS CDS 4010 4124 . + 1 ID=cds.g2060.t1;Parent=g2060.t1 #PROT g2060.t1 g2060 MARTLRVLCILLLVAMSCGVTSAQQYNLTIWTLSGANGEGYTSGTLSFKLYGSTTTAGPYNVPSGITNRTVSLTAPPAAPYVGTLLRIGIVPNADSWQPERITVTYGTESYDFKFSSVDVLVDTGASPKEVFVCAIPQAPENGAFSCPSTYASSGASRNYCSLRCDAGYFPSSTSQAACSSATGFTGFQGYSNRFAFCDPNCNPPISGECAYVNRASCRKPNVCGPCLNSYGVRSNPIASTSDSNIECTDFTTTYTIKLVMSYATGAGTDLPCTATLLGSTGKSDNSVLFNSVSILGNIQPLNPGSIYRATIYSTFFGFELLRGLRISCAYNGDNPGVTNWWLPSYIEIDSDNLGLPNAVRYNFLTSDRLDYGTWTLFAPPTDYPPRGSILCNSSMPGRACSVVCDSGYLPSTGVTLPSGTSAPFSTVGIARAACYPDCTARNSSYCAGLNRLPCGDVPNTCGACMPGYNTSTPSAPSSDDAPCVRYINYVIDIKTLSQPFKGSFYMTINGNAGTTGEFVVTSGGVSANSVFSSVFYLKSVGTISAISFDVTDTAWFAWVDSWNGQYINIAYLDGDIARAFNATLPQTSLFAGTTQTACTLPASPVNGYFTCDSTLTTSTVGCVAKCNPTYVTTSLASRAFTCAPDGSYRDGSLVLLNVSQPFCQISNPCTILNATCGSNSICKNPTPAAMSNCGTFSTCAAGAGGKANCMCFAGYSSAFTNNTNCARG* # ORIGINAL: g11354.t1 original gene structure, not modified by PASA NODE_4450_length_1600_cov_40.48 AUGUSTUS gene 131 1247 . - . ID=g11354;Name=g11354.t1 NODE_4450_length_1600_cov_40.48 AUGUSTUS mRNA 131 1247 . - . ID=g11354.t1;Parent=g11354;Name=g11354.t1 NODE_4450_length_1600_cov_40.48 AUGUSTUS exon 131 1247 . - . ID=g11354.t1.exon1;Parent=g11354.t1 NODE_4450_length_1600_cov_40.48 AUGUSTUS CDS 131 1247 . - 0 ID=cds.g11354.t1;Parent=g11354.t1 #PROT g11354.t1 g11354 MCAQFHHKEDLVVSASLDQTVRVWDISGLRKKTVLPGAGGLDDHLKNPNQTDLFGQSDAIVKHVLEGHDRGVNWAAFHPSLPLIVSGADDRMVKLWRMNESKAWEVETSRGHFNNVSCVIFHPRQEFILSNSEDKSIRVWDMTKRAGVQTYRRENDRFWIVAASPTCNLFAAGHDSGMIVFKLERERPAYAVHGNQLFYVKDRFLRAYELGTTRDQPAMGIRRPHVPFSPFLSLAYNPAESAFLLTSAADNGSYELYTMGKDADSRESTEPRRGLGIGAVWVARNRFAVLDKPTIVVKNLKNEVTKKITAPHATTDMLFYAGTGNLLLRSAEAVTLFDVQQKRVLGEIATHNPVKYVVWSADMGAVALISKH # PASA_UPDATE: g5736.t1, single gene model update, valid-1, status:[pasa:asmbl_8022,status:12],[pasa:asmbl_8023,status:12], valid-1 NODE_536_length_21621_cov_53.9263 . gene 7970 10783 . - . ID=g5736;Name=g5736.t1 NODE_536_length_21621_cov_53.9263 . mRNA 7970 10783 . - . ID=g5736.t1;Parent=g5736;Name=g5736.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 10637 10783 . - . ID=g5736.t1.utr5p1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 10466 10783 . - . ID=g5736.t1.exon1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 10466 10636 . - 0 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 10150 10313 . - . ID=g5736.t1.exon2;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 10150 10313 . - 0 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 9881 10025 . - . ID=g5736.t1.exon3;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 9881 10025 . - 1 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 9047 9775 . - . ID=g5736.t1.exon4;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 9047 9775 . - 0 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 8744 8872 . - . ID=g5736.t1.exon5;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 8744 8872 . - 0 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . exon 7970 8592 . - . ID=g5736.t1.exon6;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . CDS 8347 8592 . - 0 ID=cds.g5736.t1;Parent=g5736.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 7970 8346 . - . ID=g5736.t1.utr3p1;Parent=g5736.t1 #PROT g5736.t1 g5736 MVAEDYKVNGQKSRRFCCKCTHIRVAVSLGIMGIASLALGLATPTIMNKVIDTQLNEGLRLDTGDSQLYSQWQDSQKIPIYMRYFVYNLTNPEEMRNGGPAKVVQFGPYTYLESRVKFDIWFNADRREVRYRQHRTYQFDPTLSVGMDTDVYTTINVPVITIVQQLASAGGVVGWIADAVLKSLMGETMFVTKQVKELLWGYKDTLLTDIMALQATAKKLGIDINLVPTDIFGLQTNDTAADWQNTSQVYTGQYDINNVTVMTVWDGKETLPYWGSKYANMINGTDGYQFHPKIKDDEILPVFVDDLYRSAFLKCTGDVKVHGITLKRFRIQPSLLANAEEDPDAAAFYAFGPRGVLNLTSATGGPIFVTKPHFFDADPWYISNVEGLTPNGDIHDTWLDIEPITGATMNAAKRLQINARVVPAANVAIIGGNVRTMLLPLIWGEEAATVTESLASDFKTQVYLPMNIGKGLNIAGIVVGAVSIAACIVVLGRYYYLKKNNLLSDPEEQALVAPASQNSYDSVDFNM* # ORIGINAL: g5740.t1 original gene structure, not modified by PASA NODE_536_length_21621_cov_53.9263 AUGUSTUS gene 18869 20871 . + . ID=g5740;Name=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS mRNA 18869 20871 . + . ID=g5740.t1;Parent=g5740;Name=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 18869 18995 . + . ID=g5740.t1.exon1;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 18869 18995 . + 0 ID=cds.g5740.t1;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 19132 19236 . + . ID=g5740.t1.exon2;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 19132 19236 . + 2 ID=cds.g5740.t1;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 19380 19670 . + . ID=g5740.t1.exon3;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 19380 19670 . + 2 ID=cds.g5740.t1;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 19968 20069 . + . ID=g5740.t1.exon4;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 19968 20069 . + 2 ID=cds.g5740.t1;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 20255 20871 . + . ID=g5740.t1.exon5;Parent=g5740.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 20255 20871 . + 2 ID=cds.g5740.t1;Parent=g5740.t1 #PROT g5740.t1 g5740 MTLFARLARTLAVRTRNAITPSVRRTLSWNSHLRSKSEKLEEELHNNFTRDSTLEESVVKVLATCQDPDYDCPWQAQYPYSRTGSGVIIGKGKILTAAHVVANGTFLQVQRTTSDSDTKKKVARVATVCHDCDLALLSVEDADFAHGVSPVEIGDLPNLRDKVSVCGFPIGGDQLAITEGVVSRVEVQQYSHSRRQLLAVSVDAAITNGNSGGPVFKNGKIVGIAFQIVDDADSIGEIVPSPVIQHFLRGAARGNYAGFPSFGIRVQNLENLSLRRHLGLPDDVLGGVLVTEVLCDNTCDGVLRPGDVLVEIDGVSIQSNSSVRIPSGSANYGASDHDTLGSTQPPMHGRVASRGKRWYQANFEVLAHAKFVGELVNVRVFREGEFLSLQAMLRAPLNLVPYDQYDVAPPYFI* # PASA_UPDATE: g5733.t1, single gene model update, valid-1, status:[pasa:asmbl_8018,status:12], valid-1 NODE_536_length_21621_cov_53.9263 . gene 3560 4839 . - . ID=g5733;Name=g5733.t1 NODE_536_length_21621_cov_53.9263 . mRNA 3560 4839 . - . ID=g5733.t1;Parent=g5733;Name=g5733.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 4748 4839 . - . ID=g5733.t1.utr5p1;Parent=g5733.t1 NODE_536_length_21621_cov_53.9263 . exon 3560 4839 . - . ID=g5733.t1.exon1;Parent=g5733.t1 NODE_536_length_21621_cov_53.9263 . CDS 3869 4747 . - 0 ID=cds.g5733.t1;Parent=g5733.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 3560 3868 . - . ID=g5733.t1.utr3p1;Parent=g5733.t1 #PROT g5733.t1 g5733 MASLRGVVGCALRAGRAACTATMSLSTSRGADATSFSRISLPFTSMMGARSASVPHCASGLRHIPVARSSTMSSLTLPSRRVVTSNLLRFPVRSSRLLCENVRSFGVVGHVPRSLSMAVAACGATYPQLSSRRGFAWWNKMKESMTVRANHIDPKTGKKLGWVRGLIKEYGMVGVGTYLVIDVTCLSATYVAFKSGVDVGSLLDSIGISHPWLNGNSSTFVLAYAFYKILAPLRLALAIAITPIILRKFRSLGWVKMPPPTLPSPGKPLGGTTSVEKDASSLLSKDKKPPTS* # PASA_UPDATE: g5734.t1, single gene model update, valid-1, status:[pasa:asmbl_8021,status:3], valid-1 NODE_536_length_21621_cov_53.9263 . gene 5472 6517 . - . ID=g5734;Name=g5734.t1 NODE_536_length_21621_cov_53.9263 . mRNA 5472 6517 . - . ID=g5734.t1;Parent=g5734;Name=g5734.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 6339 6517 . - . ID=g5734.t1.utr5p1;Parent=g5734.t1 NODE_536_length_21621_cov_53.9263 . exon 6222 6517 . - . ID=g5734.t1.exon1;Parent=g5734.t1 NODE_536_length_21621_cov_53.9263 . CDS 6222 6338 . - 0 ID=cds.g5734.t1;Parent=g5734.t1 NODE_536_length_21621_cov_53.9263 . exon 5472 6093 . - . ID=g5734.t1.exon2;Parent=g5734.t1 NODE_536_length_21621_cov_53.9263 . CDS 5488 6093 . - 0 ID=cds.g5734.t1;Parent=g5734.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 5472 5487 . - . ID=g5734.t1.utr3p1;Parent=g5734.t1 #PROT g5734.t1 g5734 MIPEELVPSNEGLLIGLGFFTMFVVCDFIGEVPRICSEQVYYVIVTWAAAYDWLNSPLTDWTDAQVLILRLSIPYFVYYTYVDARRRRWPFVVHHLLVLFFFLFPAKCPEFHYVFTVAGLMEVSNFTLNSFDLAQVYGCQPDSLLYKLFGLVFVISFIFRLVYPLPAILFLCLGITSAGDGCPQQPSWWYVVTACIFLLIWLHIKWTALICGRFVDTFVNKSGEAVRSLTADQKKPAKSD* # PASA_UPDATE: g5732.t1, single gene model update, valid-1, status:[pasa:asmbl_8020,status:12], valid-1 NODE_536_length_21621_cov_53.9263 . gene 72 2391 . - . ID=g5732;Name=g5732.t1 NODE_536_length_21621_cov_53.9263 . mRNA 72 2391 . - . ID=g5732.t1;Parent=g5732;Name=g5732.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 2317 2391 . - . ID=g5732.t1.utr5p1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 2247 2391 . - . ID=g5732.t1.exon1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 2247 2316 . - 0 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 2045 2118 . - . ID=g5732.t1.exon2;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 2045 2118 . - 2 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 1866 1943 . - . ID=g5732.t1.exon3;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 1866 1943 . - 0 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 1545 1646 . - . ID=g5732.t1.exon4;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 1545 1646 . - 0 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 1313 1400 . - . ID=g5732.t1.exon5;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 1313 1400 . - 0 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 811 976 . - . ID=g5732.t1.exon6;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 811 976 . - 2 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 414 570 . - . ID=g5732.t1.exon7;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 414 570 . - 1 ID=cds.g5732.t1;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . exon 72 264 . - . ID=g5732.t1.exon8;Parent=g5732.t1 NODE_536_length_21621_cov_53.9263 . CDS 72 264 . - 0 ID=cds.g5732.t1;Parent=g5732.t1;3_prime_partial=true #PROT g5732.t1 g5732 MASTSNSKRRRCIGVLTSGGDAPGMNAAVRAVVRVAMYNNVDAYAIYEGYQGMVDGGEYIRKMNWEDVAGILSQGGTVIGTARCKAFRERPGRLIAARNLVKHGINSLVVIGGDGSLTGANLFKKEWRGYIEELITTGQITQQEADVVGDFNIVGLVGSIDNDMSGTDITIGADTALNRIIEAVDAIQSTAASHKRSFVLEVMGRNCGFLALMAALASGADWVFIPESPPEVDDWETVMCTEISKGRDQGKRMSIVIVSEGARDRKGNAISSNYVKSVIEKRLDHDTRVTVLGHVQRGGNPSAFDRILV # ORIGINAL: g5739.t1 original gene structure, not modified by PASA NODE_536_length_21621_cov_53.9263 AUGUSTUS gene 16015 18200 . - . ID=g5739;Name=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS mRNA 16015 18200 . - . ID=g5739.t1;Parent=g5739;Name=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 18076 18200 . - . ID=g5739.t1.exon1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 18076 18200 . - 0 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 17766 17886 . - . ID=g5739.t1.exon2;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 17766 17886 . - 1 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 17387 17533 . - . ID=g5739.t1.exon3;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 17387 17533 . - 0 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 17144 17190 . - . ID=g5739.t1.exon4;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 17144 17190 . - 0 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 16754 16869 . - . ID=g5739.t1.exon5;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 16754 16869 . - 1 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 16347 16396 . - . ID=g5739.t1.exon6;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 16347 16396 . - 2 ID=cds.g5739.t1;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS exon 16015 16221 . - . ID=g5739.t1.exon7;Parent=g5739.t1 NODE_536_length_21621_cov_53.9263 AUGUSTUS CDS 16015 16221 . - 0 ID=cds.g5739.t1;Parent=g5739.t1 #PROT g5739.t1 g5739 MSRKFQVHLSLNNLSSIPFVNGILFAKLKLKDGGKLTALSSRKEINNHSVAWEDTFPFTVKISAQKETAMLDTCSLKISIRKESKGGKAFDKLGFVKVNISEFAGTGKTERRYILDGYEGDRRRQDNSVLKITVTMTLLDGDPCFKAPLAPSLPQGADGLASAIIAGARDHTDSLEVKQQKSNNRLSSQFHNYSLGAPLSSKGLGEDRPVAAVIERSRVDASDVIDDLLKNTGDLLLAENTDEEGAGVEEPSLRLYVSQDGTASVTARRR* # PASA_UPDATE: g5738.t1, single gene model update, valid-1, status:[pasa:asmbl_8026,status:12], valid-1 NODE_536_length_21621_cov_53.9263 . gene 14305 15677 . + . ID=g5738;Name=g5738.t1 NODE_536_length_21621_cov_53.9263 . mRNA 14305 15677 . + . ID=g5738.t1;Parent=g5738;Name=g5738.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 14305 14338 . + . ID=g5738.t1.utr5p1;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . exon 14305 14341 . + . ID=g5738.t1.exon1;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . CDS 14339 14341 . + 0 ID=cds.g5738.t1;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . exon 15056 15145 . + . ID=g5738.t1.exon2;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . CDS 15056 15145 . + 0 ID=cds.g5738.t1;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . exon 15449 15677 . + . ID=g5738.t1.exon3;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . CDS 15449 15607 . + 0 ID=cds.g5738.t1;Parent=g5738.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 15608 15677 . + . ID=g5738.t1.utr3p1;Parent=g5738.t1 #PROT g5738.t1 g5738 MATGQDRFVGGTFLLLSITIFTYYTLWVIVLPFVDPSHALQQLFPAREYAILAPAALGVVLLSLVGIFVLVILAKNKPKPKTN* # PASA_UPDATE: g5737.t1, single gene model update, valid-1, status:[pasa:asmbl_8025,status:3], valid-1 NODE_536_length_21621_cov_53.9263 . gene 12346 13691 . + . ID=g5737;Name=g5737.t1 NODE_536_length_21621_cov_53.9263 . mRNA 12346 13691 . + . ID=g5737.t1;Parent=g5737;Name=g5737.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 12346 12581 . + . ID=g5737.t1.utr5p1;Parent=g5737.t1 NODE_536_length_21621_cov_53.9263 . exon 12346 13158 . + . ID=g5737.t1.exon1;Parent=g5737.t1 NODE_536_length_21621_cov_53.9263 . CDS 12582 13118 . + 0 ID=cds.g5737.t1;Parent=g5737.t1 NODE_536_length_21621_cov_53.9263 . exon 13491 13691 . + . ID=g5737.t1.exon2;Parent=g5737.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 13119 13158 . + . ID=g5737.t1.utr3p1;Parent=g5737.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 13491 13691 . + . ID=g5737.t1.utr3p2;Parent=g5737.t1 #PROT g5737.t1 g5737 MPLTQGITATVCKNSIAPPIALPFTGKMCLPATNTGYLYFLVCDGAPVVVKSHPIPHEEMQRNSPNEDFDSECLQQRRNHHKILYICFECGPFSAPMTKGSTRQHAQSHARGRLMCNVCGSNFSQSASLSRHKKRKKCRTLARNRRLKPTAAPAMESANEESGVQNHFSTDKPREARP* # PASA_UPDATE: g5735.t1, single gene model update, valid-1, status:[pasa:asmbl_8024,status:3], valid-1 NODE_536_length_21621_cov_53.9263 . gene 6842 7921 . + . ID=g5735;Name=g5735.t1 NODE_536_length_21621_cov_53.9263 . mRNA 6842 7921 . + . ID=g5735.t1;Parent=g5735;Name=g5735.t1 NODE_536_length_21621_cov_53.9263 . five_prime_UTR 6842 6879 . + . ID=g5735.t1.utr5p1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . exon 6842 7031 . + . ID=g5735.t1.exon1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . CDS 6880 7031 . + 0 ID=cds.g5735.t1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . exon 7151 7200 . + . ID=g5735.t1.exon2;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . CDS 7151 7200 . + 1 ID=cds.g5735.t1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . exon 7319 7457 . + . ID=g5735.t1.exon3;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . CDS 7319 7457 . + 2 ID=cds.g5735.t1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . exon 7571 7921 . + . ID=g5735.t1.exon4;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . CDS 7571 7703 . + 1 ID=cds.g5735.t1;Parent=g5735.t1 NODE_536_length_21621_cov_53.9263 . three_prime_UTR 7704 7921 . + . ID=g5735.t1.utr3p1;Parent=g5735.t1 #PROT g5735.t1 g5735 MVSQTKMGADYVNYGTATYVTVVAGMNFLVSRQISIIPITAVIAGCYANGGRLISHGDELKGYKYGLAGASLLGGIGILSRFQRKPAAPPPPPRIPKGVQQAPVPKGIQQAPPRQVPGFRLFRTGVVVLSALYNIYGIYTVNRDLRATDQSFDDDIL* # ORIGINAL: g1971.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 23103 23555 . - . ID=g1971;Name=g1971.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 23103 23555 . - . ID=g1971.t1;Parent=g1971;Name=g1971.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 23103 23555 . - . ID=g1971.t1.exon1;Parent=g1971.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 23103 23555 . - 0 ID=cds.g1971.t1;Parent=g1971.t1 #PROT g1971.t1 g1971 MLIYVVPKQMRLVKTKILRISQPQPQQMTVPQLPIVRQPVLVGIDSPTVSFNELTRGLPPPFRQIGILYSVADEGRSKVMPLFGRPLYPRSRQFDYYTVADNMNQVQIPIERPNRREIEDGDLIRGIPGLHGEWKVRMYENNVLFYDPYS* # ORIGINAL: g1969.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 20509 20974 . + . ID=g1969;Name=g1969.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 20509 20974 . + . ID=g1969.t1;Parent=g1969;Name=g1969.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 20509 20816 . + . ID=g1969.t1.exon1;Parent=g1969.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 20509 20816 . + 0 ID=cds.g1969.t1;Parent=g1969.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 20968 20974 . + . ID=g1969.t1.exon2;Parent=g1969.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 20968 20974 . + 1 ID=cds.g1969.t1;Parent=g1969.t1 #PROT g1969.t1 g1969 MLTSPVVGPDGNVFVLTCDGLYFLDGWTGELKWSFAVSNHCEPGSVALSPDGNTVYVGMGHEFYALETAFGMVRWRSLSGELTVAEIAALANPGFAFTVAMKRA* # ORIGINAL: g1966.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 7642 9087 . - . ID=g1966;Name=g1966.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 7642 9087 . - . ID=g1966.t1;Parent=g1966;Name=g1966.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 7642 9087 . - . ID=g1966.t1.exon1;Parent=g1966.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 7642 9087 . - 0 ID=cds.g1966.t1;Parent=g1966.t1 #PROT g1966.t1 g1966 MLPSPSDLVVVGKVTETTANILFDPVSVAFSVTLIVEQTGDVVHTADVVPRDGEQRPAPVIIALTNLREDTSYLVVNDEQYVVARFATFPGIKKQREVEFLVISCDNPELEGAKDAWLEVWTRVKTGKIDVIYHIGDQIYGDKVFRKHVKTATFSKDRALDDYRELYRKSWGGNKYKNLVLRSVSNVMVCDDHDVVDAWNRRPQHYFGRMQSVIAAGETAFQEYQRSLFTGTISKSENSESRYHLWQYHACAGLLVFAIEHRTTGLHNMISSKQMEDLALCIQEYRPERIVLLSPVPPTAQFGGVYKRVLKTIFESDTLDSWTVEESSLLYDTLSIAGAPTLIISGDQHLALSGTLSRQANSHANSHANSHANSQANAAFAIPFCQIGPMTIGTSIPYAYRKLVGKGYKAAAKKQTDYRIKFEGSPDGRQNYAWVRVTPFDDEAPIAHEIVFVKTMRPEAEGIVAQAGLQMQALARAVSYL* # ORIGINAL: g1968.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 20172 20468 . + . ID=g1968;Name=g1968.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 20172 20468 . + . ID=g1968.t1;Parent=g1968;Name=g1968.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 20172 20468 . + . ID=g1968.t1.exon1;Parent=g1968.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 20172 20468 . + 0 ID=cds.g1968.t1;Parent=g1968.t1 #PROT g1968.t1 g1968 MLTSCNPHHSCAATFKSSTWRRRSNSEPPARMSLALLWASVLSVVVVFAAGAAIEAPIKMPDIDFLGTGYNVVYGNPAGEEKTVSRSGLAPTGHNVDI* # ORIGINAL: g1965.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 1818 3759 . + . ID=g1965;Name=g1965.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 1818 3759 . + . ID=g1965.t1;Parent=g1965;Name=g1965.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 1818 2048 . + . ID=g1965.t1.exon1;Parent=g1965.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 1818 2048 . + 0 ID=cds.g1965.t1;Parent=g1965.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 2395 3759 . + . ID=g1965.t1.exon2;Parent=g1965.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 2395 3759 . + 0 ID=cds.g1965.t1;Parent=g1965.t1 #PROT g1965.t1 g1965 MSTSLEIFNQAKKLKETSHDHTVYVDLVIQAANAGNVDAMIEAYYLIYEDEVRQRNLVEDMLTQAHELGHKGAFNLLVGALAGSAMCMYEFASEYIKMRGFTNNNGNNVGIKYLEKAAAAGNGRALYVLGRWYVDGSVTRVRCIEQGLEYLQRAAFQRHVPSMSLYAKTVEGYAKKTSRMEEYAREFKQLADKLISSITTPTDATDATATDATAAMPATTATPDDSKRARLAEIFAKIDCIEAIVRLPEEVPDHASFNNAKLSKLVALAKPLMKLTELVGMEDVKEQLYSQICAMMHAGRADKHKHNHTHNHIVIAGSPGVGKTHLANVICELMFAMGVVKKNKPVMPDKADILGKYVGHTAANMKNIIDDAKDAVLFIDEAYGLGVEDADSGSGNSCREAIDTLLQALDTGKFVCIIAGYSDMLTKCFFNMNVGLRRRFRYWYDIKNPNANQLCTIFDKKLASHGWSISENDVAQAHAAITADYGSFTSFGGDVEGLIEHAIQNWGVCQMKAAIDCENGRKTLTKANIEA* # ORIGINAL: g1970.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 21091 21522 . + . ID=g1970;Name=g1970.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 21091 21522 . + . ID=g1970.t1;Parent=g1970;Name=g1970.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 21091 21522 . + . ID=g1970.t1.exon1;Parent=g1970.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 21091 21522 . + 0 ID=cds.g1970.t1;Parent=g1970.t1 #PROT g1970.t1 g1970 MTLSTSLIECPPELRAFDAVTGASRWTFTGDGSITFANSPAVGPDGTVYVGCDAGNVYAVDGATGHLKWEYQTGGNVAAAPAIPTDGIVYIGSNNKSMMAFNGTTGAIKWRMETADFVTSSAAIDSDGTVFVGSEDGFLYAFN* # ORIGINAL: g1967.t1 original gene structure, not modified by PASA NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS gene 11107 19598 . - . ID=g1967;Name=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS mRNA 11107 19598 . - . ID=g1967.t1;Parent=g1967;Name=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 17865 19598 . - . ID=g1967.t1.exon1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 17865 19598 . - 0 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 17236 17683 . - . ID=g1967.t1.exon2;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 17236 17683 . - 0 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 16972 17109 . - . ID=g1967.t1.exon3;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 16972 17109 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 16729 16863 . - . ID=g1967.t1.exon4;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 16729 16863 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 16450 16591 . - . ID=g1967.t1.exon5;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 16450 16591 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 16232 16338 . - . ID=g1967.t1.exon6;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 16232 16338 . - 1 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 16003 16143 . - . ID=g1967.t1.exon7;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 16003 16143 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 15829 15907 . - . ID=g1967.t1.exon8;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 15829 15907 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 15647 15675 . - . ID=g1967.t1.exon9;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 15647 15675 . - 1 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 15394 15531 . - . ID=g1967.t1.exon10;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 15394 15531 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 14900 15043 . - . ID=g1967.t1.exon11;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 14900 15043 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 14671 14805 . - . ID=g1967.t1.exon12;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 14671 14805 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 14400 14537 . - . ID=g1967.t1.exon13;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 14400 14537 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 14153 14278 . - . ID=g1967.t1.exon14;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 14153 14278 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 13465 13732 . - . ID=g1967.t1.exon15;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 13465 13732 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 13243 13301 . - . ID=g1967.t1.exon16;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 13243 13301 . - 1 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 12982 13095 . - . ID=g1967.t1.exon17;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 12982 13095 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 12347 12847 . - . ID=g1967.t1.exon18;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 12347 12847 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 11820 12057 . - . ID=g1967.t1.exon19;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 11820 12057 . - 2 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 11396 11603 . - . ID=g1967.t1.exon20;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 11396 11603 . - 1 ID=cds.g1967.t1;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS exon 11107 11250 . - . ID=g1967.t1.exon21;Parent=g1967.t1 NODE_396_length_24853_cov_30.3847_potentialcontaminant AUGUSTUS CDS 11107 11250 . - 0 ID=cds.g1967.t1;Parent=g1967.t1 #PROT g1967.t1 g1967 MKTEATLFGSRECAVMSTARDRHGQYESAAINVAIPTLPTRHCRPHSAGSHGFITRPSGVAFNRRTFRFAHASALITLAAFAIIVELLPASAQLYYFSIWTTPNADNDGYTTGQVGFTLYGSDATSATYTLPSITARNVNSTVSTSNVGALGTLLKLGITPNADNWRPERIVVTYLTNAYLFKFAATDVLADAATTPSQVYVCAVPQSPPNGAFNCPSSYSLSGANNVCALTCNAGYTPSSPATAACPTSSSFSGYSNANAQCVADCAPTTSCAYLNRQTCRGALPNVCGPCQSTYGVKGDPIASTSDSNIACTLYFITYSIWLQISVANGAGTDLPCVLSMVGTNGYQSGGPVSLNDPPTGLLSIGQAYTYTVKSTFFGYEVVRGLKITCDYKTNGITNAWLPTYIAVSSDEAGLRGATVGYNFLTSDRLDYGTRFLFAPPSGTPANGKIMCPSSFPGYTCTFICNTNYAAAGGTGVTLPSGSTFPFSTASIDSAVCKTDCSLRSDSYCAGLNRQPCGAVANTCGPCMDGFDTSLRTGSNAADTACLQFAKYNLEIKTGKTGFGGAFYMTVVGDLGSTDEIVVKSSGFASASTFRGTLYGKYIGPNFLAVKFRFIGLSSAVYDYWNGVYIDLSYATDDYWRFYATLPSTSIKSDATYTACNFPLDPLNGTFACDSTLTIASGCSATCNVPTYTTTSLASRVYSCRSDGAFRDGSQIALNTSQTFCQISNPCTVNGGLCGVNSVCTNPSPTVSKCACTNSSFYSPTADDKNCTLVNPCAANNGDCGANSTCMFTGTGTRMCACLSSFESATKDGRNCTAVAGCTNCVGNSICDTNLKRCVCLRGYVSDLNEGRNCRLATECDTNSGICGTFSTCAAGTGGKANCTCFSGYSSILTNNTNCAATNNCLKNNGGCGLNATSMCTMTGPGLNWCQCLDGFVSPNGTQRDCRAITLCEKNSAYCGENTVCVNVNATALSDFKNGSFCREPTGCDAVDPCGQFSHCKPNSATPRIAACTCLPGYFSDTKDGLGCRETTPCDGDVNPCGSFSKCSSPPSDNTTFTCACDAGYVSDLGTAVKDCRLATFCDLNKEYCGAFSTCVSTDALSGTCPCIGAAYLPNADQRGCRAITDCDDHPCFPEGIATCNVSPTNTAVSTCSCRDGYIADQPSRFCKEKDICDMTPCGQNEVCLKITAQNRTCDCEPKYYRKAGSSACVAIPPVDGGGSGTNTNTNTNTNTNTNTNTNTNTNTNTNSGAAGGNQSGGGSSIPLPMVGGAVGGVVIVGAIVGALIYRYRLKAGSKSLPLWNDDAGREIAVFENPVNVAKSRSANAKGAGGGFEMKPFGAGTLKRMEGSISTEGLLGEDQDEASERMYESLRHVADTRESPYATLEEVREHMSKGFSADTNKENPYATIAGDVPENENPYASTTLSVDNESPYATVRKNAAGYARIERPENPYASIIRDGEEGTDESGYAHVFRDPEVYRRAFETIVKHYASNARGGGVSRDSQLPTGERAYEAIDQVLRKMRAEGIPEIARDHVTVQGLLGEGNFGEVHKGLLMQENDGNQATATGVVMYVPQGPRTVALKTLKETAKAVERAAFIDEAILMTRLKHPNVVALLGVVVRGGELTIVLEFMANGSLLDYLKDKEETLKRSALIAMARDIAAGMVVLESAKLVHRDLAARNVLVNSNGSCKIGDFGLARTLENDYYITKWDMPAYRITYTLL* # ORIGINAL: g1393.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 6718 10998 . - . ID=g1393;Name=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 6718 10998 . - . ID=g1393.t1;Parent=g1393;Name=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 10851 10998 . - . ID=g1393.t1.exon1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 10851 10998 . - 0 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 10415 10469 . - . ID=g1393.t1.exon2;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 10415 10469 . - 2 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 10191 10249 . - . ID=g1393.t1.exon3;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 10191 10249 . - 1 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 9554 9883 . - . ID=g1393.t1.exon4;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 9554 9883 . - 2 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 8854 9058 . - . ID=g1393.t1.exon5;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 8854 9058 . - 2 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 8431 8692 . - . ID=g1393.t1.exon6;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 8431 8692 . - 1 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 7952 8168 . - . ID=g1393.t1.exon7;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 7952 8168 . - 0 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 7124 7559 . - . ID=g1393.t1.exon8;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 7124 7559 . - 2 ID=cds.g1393.t1;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 6718 6874 . - . ID=g1393.t1.exon9;Parent=g1393.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 6718 6874 . - 1 ID=cds.g1393.t1;Parent=g1393.t1 #PROT g1393.t1 g1393 MAAFEGDVGDPLDWPASFAELKTLDTLLRCSICYEYYKNAMLIPQCSHNYLQNNRTLDELVGAFASVRPRLLELVRRSLEPPKPNPAELAESTPAPDRQLVAGGRIIAARNPITPQSNRTPRVASSSCSDAPHVACVGLREKTSSVDKKKRRRRRNASSDSDGDVTYKSDQNDGSDASYRGEEGDCGRKSESRAHTKVPLGSPDTTAPPSTTAAGQSTAATNVVATDDGMGKVDCPVCGMGVAESKINGHLDACLERDERKESLRRSGLSAPIFGLNSAAATAAPMRSIASLASAQPARKSGAVGGNDVTYATTNASVIPRKRIPKMVYSIVKDPQLKKMLAEHGLSTAGDRQALVARHTEFILRHNAECDSLNPRPLSEIIRDIERMEKERAKDAKEKTLSRQQMQMVETKGDVASVEESQRKYLAANQPTFNRLTEIARMNMKAKASAASAAVAANPASAVSNTDNVAIATAPDSADHSPLPCPSEGGLVQSAHASADSSLQNARDTPRDGCASSQDAGSDLDLCSSKPVRLSDIRIPETPTRLLDGSGEVGEGRGGASTGGRRKRRIDVTAGDDDMEDFVNVRSASKKNVARPPQSHEGDCHVGSDGLDVEQMSSGGGC* # ORIGINAL: g1391.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 154 1379 . - . ID=g1391;Name=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 154 1379 . - . ID=g1391.t1;Parent=g1391;Name=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 1039 1379 . - . ID=g1391.t1.exon1;Parent=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 1039 1379 . - 0 ID=cds.g1391.t1;Parent=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 702 795 . - . ID=g1391.t1.exon2;Parent=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 702 795 . - 1 ID=cds.g1391.t1;Parent=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 154 308 . - . ID=g1391.t1.exon3;Parent=g1391.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 154 308 . - 0 ID=cds.g1391.t1;Parent=g1391.t1 #PROT g1391.t1 g1391 MSGRNIGARAARILRSMRGPASSTLNKATCTTANHDIGREASDLTGSSPSDLSASSATQKKPKVLVISGPTAAGKSDVALLLARRLNGEIISADCVQVYRGLDVATSKPTAWERRKVPHHLVDIVDFNEPFSAGEFRKRALDAIEDIHARGKLPIIVGGTGFYLRFLMRDFPQIPSDKAVRARIQLELEQDESWEQ # ORIGINAL: g1395.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 15722 18009 . + . ID=g1395;Name=g1395.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 15722 18009 . + . ID=g1395.t1;Parent=g1395;Name=g1395.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 15722 16419 . + . ID=g1395.t1.exon1;Parent=g1395.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 15722 16419 . + 0 ID=cds.g1395.t1;Parent=g1395.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 16617 18009 . + . ID=g1395.t1.exon2;Parent=g1395.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 16617 18009 . + 1 ID=cds.g1395.t1;Parent=g1395.t1 #PROT g1395.t1 g1395 MDAQETPDWPVDDEAVSRKRSRSAQDDHSSAADEQEVAQVTRKPRMASESLENAKALSEGSEDDFDGSYDGRNGDDDEDDDGDSEDSNIENEEGSGSDGNVLADENGYGSDGTSQGSEHLNGEGSFPVDAHDEIEMLLSEKNADINELRAKYGVADASAHSGIDEHLLVGFGGIAPGVAGDVLDASGLAGADGGADGGHVAPAPAEVVEDAPVATGDEAGLTDPGDGGDGAVRRSTRVRRPVGTTKPDANDANGTITYMEGNGDQVTSECTCDDFDSELCRRCGNCPVCCICPNGALLLHPLVSAEPFPVRPASGAEELPAIRSRSQRRREKSDRIEHGIAGHLEVARRVLQPDFTRDVRKVIDVYRVIIAQAVKNLTTHQNIANQQTSSMYSRTALGSDPLPPSAVRDALLRCMDDAKAAIVKDYKGVQQAKQTRAAEDVRARVDAPSSRESVEPSSRLAADNGGRRAHKERKGEREEHGARRAREGVSSGASVGDENEEVEDGDGSQGNAGATSDDDNDDNGGDDDNNGGDDDSDDGDEDARGTGDSDGGGAEVEEEAEASPAAAVSFPRHLIVRGKYAVTACNPQAIDTKTQFLLGANVNVYLLAAGKGRLYSRHPNLYMFSPNFEEKRVLQSMEIIQNTGSKATLLLRSQIMEIVGHYKPYMKFKKEIAALKTFTLPSKMISRARNAHKVKH* # ORIGINAL: g1392.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 3131 5741 . + . ID=g1392;Name=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 3131 5741 . + . ID=g1392.t1;Parent=g1392;Name=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 3131 3213 . + . ID=g1392.t1.exon1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 3131 3213 . + 0 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 3411 3459 . + . ID=g1392.t1.exon2;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 3411 3459 . + 1 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 3702 3765 . + . ID=g1392.t1.exon3;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 3702 3765 . + 0 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 4162 4232 . + . ID=g1392.t1.exon4;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 4162 4232 . + 2 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 4368 4419 . + . ID=g1392.t1.exon5;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 4368 4419 . + 0 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 4763 4882 . + . ID=g1392.t1.exon6;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 4763 4882 . + 2 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 5171 5327 . + . ID=g1392.t1.exon7;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 5171 5327 . + 2 ID=cds.g1392.t1;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 5630 5741 . + . ID=g1392.t1.exon8;Parent=g1392.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 5630 5741 . + 1 ID=cds.g1392.t1;Parent=g1392.t1 #PROT g1392.t1 g1392 MRPDIAVSLSDNVTNAAGKKRVRKSVERTLAFLDELLAMRASDPGTSTESDRKKSAEETAQRNVDGYVIEGFGSGELASDREAMARATIANIPITKPRMVYGLGTPEEVLDAVSWGVDLFDGFYPVALTEQGMALTFSFAHPAAHPVRKVCLWDDCFVEDASVLLPGCGCVSCAKGHSRAYIHHLLNTHEMLASVLLMSHNLHVYERFFREIRASIANDTFDFARAAFIAAYSGR* # ORIGINAL: g1394.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 11687 14418 . + . ID=g1394;Name=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 11687 14418 . + . ID=g1394.t1;Parent=g1394;Name=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 11687 11765 . + . ID=g1394.t1.exon1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 11687 11765 . + 0 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 12216 12377 . + . ID=g1394.t1.exon2;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 12216 12377 . + 2 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 12617 12774 . + . ID=g1394.t1.exon3;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 12617 12774 . + 2 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 12959 13084 . + . ID=g1394.t1.exon4;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 12959 13084 . + 0 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 13557 13708 . + . ID=g1394.t1.exon5;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 13557 13708 . + 0 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 13818 13903 . + . ID=g1394.t1.exon6;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 13818 13903 . + 1 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 14067 14101 . + . ID=g1394.t1.exon7;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 14067 14101 . + 2 ID=cds.g1394.t1;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 14254 14418 . + . ID=g1394.t1.exon8;Parent=g1394.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 14254 14418 . + 0 ID=cds.g1394.t1;Parent=g1394.t1 #PROT g1394.t1 g1394 MAMRGLLALRSLSVAAVRSSAIIRSGEEELSAELSALASRIGLELNGEVYAGLGVAVTRKQNLNYSEQPSLGDHGRLSLQGALTLRQIAGDYFLGRFPSYPSRTVQSLLLFITSPDVCFEVGKSLGLEVFASEKWAPIDVRNFVSDNLFALVATIYQTKVRIRGGLLVEFRVLHDGLGRTREFFHDFFVPRADEIDFEETIKTVFPERDLLKYLILSDRTPAVDYRLVRESGRLTHLPLYEVAVYAQEGEEIGRGVGHSLKRAKEAAARDAVIRFIGADNGKYTLDTSVPDLPLRFPLDRKFTSKTAVLRADSTASELQA* # ORIGINAL: g1396.t1 original gene structure, not modified by PASA NODE_599_length_20412_cov_39.8571 AUGUSTUS gene 18704 20063 . + . ID=g1396;Name=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS mRNA 18704 20063 . + . ID=g1396.t1;Parent=g1396;Name=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 18704 18768 . + . ID=g1396.t1.exon1;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 18704 18768 . + 0 ID=cds.g1396.t1;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 19057 19135 . + . ID=g1396.t1.exon2;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 19057 19135 . + 1 ID=cds.g1396.t1;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 19280 19359 . + . ID=g1396.t1.exon3;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 19280 19359 . + 0 ID=cds.g1396.t1;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 19644 19763 . + . ID=g1396.t1.exon4;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 19644 19763 . + 1 ID=cds.g1396.t1;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS exon 19964 20063 . + . ID=g1396.t1.exon5;Parent=g1396.t1 NODE_599_length_20412_cov_39.8571 AUGUSTUS CDS 19964 20063 . + 1 ID=cds.g1396.t1;Parent=g1396.t1 #PROT g1396.t1 g1396 MASSFFQPTAQKKAVSAAASVPRPKTVDDVAYQDEVVAVLKKSLEGNDFPHFLFYGPPGTGKTSTILAVARQLFGPELMKQRVLELNASDERGIKVIRDKVKSFAQFTATRQVVNHFHAAPMRVKHVDVGASVLVDRPVLDFLRRVH* # ORIGINAL: g13449.t1 original gene structure, not modified by PASA NODE_2999_length_4567_cov_41.9343 AUGUSTUS gene 929 4310 . + . ID=g13449;Name=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS mRNA 929 4310 . + . ID=g13449.t1;Parent=g13449;Name=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 929 931 . + . ID=g13449.t1.exon1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 929 931 . + 0 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 1740 2215 . + . ID=g13449.t1.exon2;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 1740 2215 . + 0 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 2427 2552 . + . ID=g13449.t1.exon3;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 2427 2552 . + 1 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 2890 3020 . + . ID=g13449.t1.exon4;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 2890 3020 . + 1 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 3289 3461 . + . ID=g13449.t1.exon5;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 3289 3461 . + 2 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 3638 3730 . + . ID=g13449.t1.exon6;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 3638 3730 . + 0 ID=cds.g13449.t1;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS exon 4029 4310 . + . ID=g13449.t1.exon7;Parent=g13449.t1 NODE_2999_length_4567_cov_41.9343 AUGUSTUS CDS 4029 4310 . + 0 ID=cds.g13449.t1;Parent=g13449.t1 #PROT g13449.t1 g13449 MRKCPAVRQTLPDSTTGGRVTLNASVTSSSCAPSDDATTGTLTRERFTVAADGYLYEATSQRYHPFAQSSHLNSTHTNGMHHDKCDDSVNGTDQSAVAASVDWSVGMAVDAGRVSKSTAAYSLRKDTYERMYPHQRVGVRWMYGLFCGRVKGGILGDDMGLGKTIQIVTYLEGLFQSSLIQRAILVLPVSLLPNWEAEFAKWAPSVRVRMYHAGSKADREDTLRRMRQRGGVLLTTYGGSAAFARGLVLSCCEALSSMPWDVMVLDEGHKIKNPSKQIPKALRTLTAKQKLIITGTPIQNCLREMWALFDFSCDGQLLGTVTEFQRTFESVIVAASDREATPDEAAAGAVAADSLRRLMEPHFLRREKRDVFPSEDAAAPSASDSVTAVTDDALAVERTHNAQSGACLQDIRSAVELGLQLKLLCIH* # PASA_UPDATE: g11985.t1, single gene model update, valid-1, status:[pasa:asmbl_3821,status:12], valid-1 NODE_2229_length_7143_cov_37.7497 . gene 392 7137 . + . ID=g11985;Name=g11985.t1 NODE_2229_length_7143_cov_37.7497 . mRNA 392 7137 . + . ID=g11985.t1;Parent=g11985;Name=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 392 491 . + . ID=g11985.t1.exon1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 392 491 . + 0 ID=cds.g11985.t1;Parent=g11985.t1;5_prime_partial=true NODE_2229_length_7143_cov_37.7497 . exon 830 912 . + . ID=g11985.t1.exon2;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 830 912 . + 2 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 1216 1326 . + . ID=g11985.t1.exon3;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 1216 1326 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 1626 1940 . + . ID=g11985.t1.exon4;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 1626 1940 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 2266 2388 . + . ID=g11985.t1.exon5;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 2266 2388 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 2553 2652 . + . ID=g11985.t1.exon6;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 2553 2652 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 2866 2957 . + . ID=g11985.t1.exon7;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 2866 2957 . + 2 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 3190 3234 . + . ID=g11985.t1.exon8;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 3190 3234 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 3445 3522 . + . ID=g11985.t1.exon9;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 3445 3522 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 3678 3794 . + . ID=g11985.t1.exon10;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 3678 3794 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 3981 4661 . + . ID=g11985.t1.exon11;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 3981 4661 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 4859 5153 . + . ID=g11985.t1.exon12;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 4859 5153 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 5300 5718 . + . ID=g11985.t1.exon13;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 5300 5718 . + 2 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 6077 6716 . + . ID=g11985.t1.exon14;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 6077 6716 . + 0 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . exon 6960 7137 . + . ID=g11985.t1.exon15;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . CDS 6960 7054 . + 2 ID=cds.g11985.t1;Parent=g11985.t1 NODE_2229_length_7143_cov_37.7497 . three_prime_UTR 7055 7137 . + . ID=g11985.t1.utr3p1;Parent=g11985.t1 #PROT g11985.t1 g11985 EDEQNIDVTCHLTMLEIYNECIYDLLGDANQKLALRESASKGIFVENLSTHEIVRAFDAIELVRRAFSNRSVAVTGMNRESSRSHVVLTITVDTRKDNTTKRSRLNFVDLAGSERQRDIQSSTPSLTRDSSASGSTGHPLSPSPSDGSVNAGGRERRSSLMRESENINKSLSALTGVITALSESESGRQHVPYRDSKLTFLLKDSLGGNSRTRIIATVNPLQCYRGDTMATLGFAARAKSIKCSIHANEAIVSPQSALVSALEEEIATLKLALAKAQVHEEYSRVMSAPPVSVERSTAECGVQTDHEEETGAGFSAGEFLGGMVTRLRTSVGGPAQAIKELKDANAALQMELNSMRGSLDEKSDALRGAHASAEEDRQRWRSLETDYELRMERMQGLQNADREALAELVPLLNASESRCTALASHAATLEGQCAKLRAQSQTRRESTDHVAVMQASLERAESERKENAGRVAQLEAALEKAFRAREEDAEVSAREQESLYVELSHMRSDNASLEALVDKLRREIETQGVALLEEAEELNREMSALRDENAAKDAEIRVLLEDVEESRLELRALKESRGLLESAFDDAEDDETTTDLAAQLRIARHSNEVLQSQLMALTNAIDTAVAASGTMDGNNAPPGHPNSTQRRCDLSAHTAQAEYNAEHVGVYLHNDGGDSDDDSMAYSESLQDAATLASSQQRRRACNRASHYNTNRIDEEGMYDGDLSEVPYSENSFVQQGSVPPSAPFAELPPHLAEVYARGRALGEKILSQSNTAQTSQSENTVQAEERGLRSSSVRTVQDSRSRDSVSFASEVRAIEPAADATVHPSKHKRKRRMSERLDAFKGRIRSFLRSPTEDDASVISALSTVDSTAGHTPAPRRSVSAVAQSTPRTHSLPPNDARGGHFAAPADSLWEVSRDSDIGHGRRSRSMTAGTNCINNSNGIHNINGLGMGAELDVGVGVGVRNVGAHALAVATHAQTRQLTARIDEIACASRDVASRQREYSCESNARSARPDGVSRSSSVESARQSASLGFNVNAHSTMAMGGIDQRIPSAAGFSTEIASIMAGKGPLELRSLGMSLGRSITAARQHAYPALQAAC* # ORIGINAL: g3811.t1 original gene structure, not modified by PASA NODE_2422_length_6345_cov_36.1389 AUGUSTUS gene 4897 5802 . + . ID=g3811;Name=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS mRNA 4897 5802 . + . ID=g3811.t1;Parent=g3811;Name=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS exon 4897 4899 . + . ID=g3811.t1.exon1;Parent=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS CDS 4897 4899 . + 0 ID=cds.g3811.t1;Parent=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS exon 5102 5264 . + . ID=g3811.t1.exon2;Parent=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS CDS 5102 5264 . + 0 ID=cds.g3811.t1;Parent=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS exon 5468 5802 . + . ID=g3811.t1.exon3;Parent=g3811.t1 NODE_2422_length_6345_cov_36.1389 AUGUSTUS CDS 5468 5802 . + 2 ID=cds.g3811.t1;Parent=g3811.t1 #PROT g3811.t1 g3811 MSEVSVLLPDDQCIMILLSDDAKVGDAVAKTYADLAEKDGDVSKYRLLERMITPEGPPQDRILGNDETIASVRARQTKAEEEGRSLDVPVQRQFEFRVVHEDMWVTVNFNIYLRMAAGIAEKSFRLYVAASMTVERAVSLIFKRLRLQPDMSNYGLFGTSDEGGFK* # PASA_UPDATE: g3810.t1, single gene model update, valid-1, status:[pasa:asmbl_4277,status:12], valid-1 NODE_2422_length_6345_cov_36.1389 . gene 158 4152 . + . ID=g3810;Name=g3810.t1 NODE_2422_length_6345_cov_36.1389 . mRNA 158 4152 . + . ID=g3810.t1;Parent=g3810;Name=g3810.t1 NODE_2422_length_6345_cov_36.1389 . five_prime_UTR 158 158 . + . ID=g3810.t1.utr5p1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 158 301 . + . ID=g3810.t1.exon1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 159 301 . + 0 ID=cds.g3810.t1;Parent=g3810.t1;5_prime_partial=true NODE_2422_length_6345_cov_36.1389 . exon 486 622 . + . ID=g3810.t1.exon2;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 486 622 . + 1 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 876 1040 . + . ID=g3810.t1.exon3;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 876 1040 . + 2 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 1295 1497 . + . ID=g3810.t1.exon4;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 1295 1497 . + 2 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 1842 1976 . + . ID=g3810.t1.exon5;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 1842 1976 . + 0 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 2466 2770 . + . ID=g3810.t1.exon6;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 2466 2770 . + 0 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 2933 3041 . + . ID=g3810.t1.exon7;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 2933 3041 . + 1 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 3228 3271 . + . ID=g3810.t1.exon8;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 3228 3271 . + 0 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 3462 3592 . + . ID=g3810.t1.exon9;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 3462 3592 . + 1 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . exon 3781 4152 . + . ID=g3810.t1.exon10;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . CDS 3781 4004 . + 2 ID=cds.g3810.t1;Parent=g3810.t1 NODE_2422_length_6345_cov_36.1389 . three_prime_UTR 4005 4152 . + . ID=g3810.t1.utr3p1;Parent=g3810.t1 #PROT g3810.t1 g3810 YRDRHQAQMFGRGHIAGIDIKYQKKELQNFYQSYLDKRKTQEELDREQELIDMEKEKEKKTKWDERHWSEKPLEAMTDRDWRIFKEDFNIATKGGAIPHPIRNWREGGMPQELVDIVDGLGYKLPSPIQMQAIPIGMQNRDIIGIAETGSGKTAAFLIPLLSWVLSLPTDTREKDHDQGPYAMILAPTRELAQQIEEDAKKFATPLGLRTIAIIGGMSREEQGFQLRIGCDLVIATPGRLLDVLENRYLVLGRCTYVVLDEADRMIDMGFEPEVKKILEYFPVTNMKPDTDEAEDASKMTETVNGSRRRYRQTVMFTATMPPTVERLARQFMRRPATVTIGTAGKPVDRVKQIVEMMKEGDKRKRLLQLLEEIQDPPIMVFVNQKKGCDILAKSLEKMGYRASVLHGGRNQEQRESALANLKTGAKDILVATDVAGRGIDVKDVMYVINYDMAKTIDDYVHRIGRTGRAGKSGTAITFLTPEDSHVFYDLKQFLLASPVSTCPSDLSSHPDAQVPAGTVREKEKKGTKFID* # ORIGINAL: g6602.t1 original gene structure, not modified by PASA NODE_1690_length_9706_cov_41.3196 AUGUSTUS gene 117 1086 . + . ID=g6602;Name=g6602.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS mRNA 117 1086 . + . ID=g6602.t1;Parent=g6602;Name=g6602.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 117 200 . + . ID=g6602.t1.exon1;Parent=g6602.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 117 200 . + 0 ID=cds.g6602.t1;Parent=g6602.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 529 1086 . + . ID=g6602.t1.exon2;Parent=g6602.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 529 1086 . + 0 ID=cds.g6602.t1;Parent=g6602.t1 #PROT g6602.t1 g6602 MFCDVLLSPMQSDLMNLLGSKCGAPLNVQPIPNDPLTAKAHSAARALKKSGHSIPIQRREELAGHVHEYLQYVRDSLPAQPAVGAAAPIRVTMADIDAVIELTSSESKRDAKKKAIREDADGSENSEHGARVVRHVLGFEEGVADSTMSGQKSSSPRIRTADSLPITSDMISRLDSFAVLWRTHFIRCMSPQHMPVGWDAARTVRNCPCDGPC* # ORIGINAL: g6604.t1 original gene structure, not modified by PASA NODE_1690_length_9706_cov_41.3196 AUGUSTUS gene 5848 7081 . + . ID=g6604;Name=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS mRNA 5848 7081 . + . ID=g6604.t1;Parent=g6604;Name=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 5848 6062 . + . ID=g6604.t1.exon1;Parent=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 5848 6062 . + 0 ID=cds.g6604.t1;Parent=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 6163 6690 . + . ID=g6604.t1.exon2;Parent=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 6163 6690 . + 1 ID=cds.g6604.t1;Parent=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 6847 7081 . + . ID=g6604.t1.exon3;Parent=g6604.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 6847 7081 . + 1 ID=cds.g6604.t1;Parent=g6604.t1 #PROT g6604.t1 g6604 MATMKERLRNVEIAASPAEHSERPDVRAGREAEMKFAARLLDLRGVDDDNVFCGVRVPRKYTDQVPGGCKGREIDVIIITQNGIACVEIKNWSGSISVSADGSTFTQTRRGGDIATHESPIHTTRAKAHALRLFLASKSIPLKEADIVSRVAFVNAKLDIPKEVRAMAEVIPPEKVAEYIDSHQRGIGSYLFGWMLPSFLGGHKLDKMTVSHAEAAVGTLPTWDVLELTGGRKTIGDFKEIEGCKISRRDVVKLRFEHSRNRFFGTVKAVFGVDATVTVHVKLRKGGHGDTFTLPITAKVVFQECSNAQVTSFAINEAERLELSV* # ORIGINAL: g6605.t1 original gene structure, not modified by PASA NODE_1690_length_9706_cov_41.3196 AUGUSTUS gene 7436 8116 . - . ID=g6605;Name=g6605.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS mRNA 7436 8116 . - . ID=g6605.t1;Parent=g6605;Name=g6605.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 7436 8116 . - . ID=g6605.t1.exon1;Parent=g6605.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 7436 8116 . - 0 ID=cds.g6605.t1;Parent=g6605.t1 #PROT g6605.t1 g6605 MTNYIFYVVIAIVVALSLNILRLLFGAFCGACSDILICCGCCRDDEEKQLDYSDDFEADAHNIALFARHRNFMDRFEDSDDGDDGGSLLFFGASDLASSRSPFARSGRPITAIVFQPPKPDDDAPPSYYYCADVPPPYSTSMIVPAGTSFGVSVSVAAASRRTSAPPPAYETPRSGTPTSGTQSAGSMSPPSPRQTPAESPEAVIASAQQSTETRRPSEVFVTIPL* # ORIGINAL: g6603.t1 original gene structure, not modified by PASA NODE_1690_length_9706_cov_41.3196 AUGUSTUS gene 1931 5148 . - . ID=g6603;Name=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS mRNA 1931 5148 . - . ID=g6603.t1;Parent=g6603;Name=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 4838 5148 . - . ID=g6603.t1.exon1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 4838 5148 . - 0 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 4579 4654 . - . ID=g6603.t1.exon2;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 4579 4654 . - 1 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 4136 4233 . - . ID=g6603.t1.exon3;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 4136 4233 . - 0 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 3418 3921 . - . ID=g6603.t1.exon4;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 3418 3921 . - 1 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 2866 3063 . - . ID=g6603.t1.exon5;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 2866 3063 . - 1 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 2600 2730 . - . ID=g6603.t1.exon6;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 2600 2730 . - 1 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 2309 2388 . - . ID=g6603.t1.exon7;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 2309 2388 . - 2 ID=cds.g6603.t1;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS exon 1931 2098 . - . ID=g6603.t1.exon8;Parent=g6603.t1 NODE_1690_length_9706_cov_41.3196 AUGUSTUS CDS 1931 2098 . - 0 ID=cds.g6603.t1;Parent=g6603.t1 #PROT g6603.t1 g6603 MNDPFFMPASGGGRSKSANGNGFNNNNKRKREAVRAPAAGARSAFGGDKGKGGLTTKGSAGKGSAGKAISGKPVGGKASANGKPPAKKARKDKEIEGDDDGPLSDDDKRKESDEEDGASESEEENAAEKRVRLAKQYIQQLERQEADDNSDIEIDRDAIAHRLQQDVMERSGRMHNRVAQLYSGATTSVEQWGNGHNLAVTCVCVSDDDRYAYSGSKDCSVIQWDVSTGRKVHVFPGGRKDTAGQHPGHTDHVLGVTVSSDGKYVVSCSRDSLVIVWDFVEKKMVKIFRGHRGPVHGVAFRRMSHTLFSAGQDRTVKIWNLDEMAYVETLFGHQDGLTAIDSLLRERTVTAGGRDCSTRIWKIPEESQLVFHGHTGSIDCVRYINEEHFVTGGEDGNVCTWSAMRKKPTAMVRHSEDENPERTWVASVASLRFTDLVASGSSDGRICLWRCDEGFRGLSLVNTIQLPGYVNALAFAKNGSLLIAGVGQEHRLGRWSRAPGSKNRLYVITLDRSAEDEDGSD* # ORIGINAL: g5573.t1 original gene structure, not modified by PASA NODE_5435_length_853_cov_30.3586 AUGUSTUS gene 147 729 . - . ID=g5573;Name=g5573.t1 NODE_5435_length_853_cov_30.3586 AUGUSTUS mRNA 147 729 . - . ID=g5573.t1;Parent=g5573;Name=g5573.t1 NODE_5435_length_853_cov_30.3586 AUGUSTUS exon 518 729 . - . ID=g5573.t1.exon1;Parent=g5573.t1 NODE_5435_length_853_cov_30.3586 AUGUSTUS CDS 518 729 . - 2 ID=cds.g5573.t1;Parent=g5573.t1 NODE_5435_length_853_cov_30.3586 AUGUSTUS exon 147 315 . - . ID=g5573.t1.exon2;Parent=g5573.t1 NODE_5435_length_853_cov_30.3586 AUGUSTUS CDS 147 315 . - 0 ID=cds.g5573.t1;Parent=g5573.t1 #PROT g5573.t1 g5573 IAGSTATKSARILSPSTASRAASSPAPLRTKYGRPPRGTPSLWKSCVSLPQTQFQKPIRSRRLMHPSPRQRISRLWRFLVDFGLEITQRPCLSFATFVAHGQTTSLEPKRTNWKRRASYSLGRSRRR # ORIGINAL: g446.t1 original gene structure, not modified by PASA NODE_6089_length_642_cov_42.8907 AUGUSTUS gene 19 420 . - . ID=g446;Name=g446.t1 NODE_6089_length_642_cov_42.8907 AUGUSTUS mRNA 19 420 . - . ID=g446.t1;Parent=g446;Name=g446.t1 NODE_6089_length_642_cov_42.8907 AUGUSTUS exon 314 420 . - . ID=g446.t1.exon1;Parent=g446.t1 NODE_6089_length_642_cov_42.8907 AUGUSTUS CDS 314 420 . - 0 ID=cds.g446.t1;Parent=g446.t1 NODE_6089_length_642_cov_42.8907 AUGUSTUS exon 19 160 . - . ID=g446.t1.exon2;Parent=g446.t1 NODE_6089_length_642_cov_42.8907 AUGUSTUS CDS 19 160 . - 1 ID=cds.g446.t1;Parent=g446.t1 #PROT g446.t1 g446 MLDFIKEELRCPGHHFRARIVAENLELLSTGHESEKNTHVHVLVDLQCPRAVNFMEIFSRRECLDAHDLKKALLCHIRPCPI* # ORIGINAL: g12890.t1 original gene structure, not modified by PASA NODE_3463_length_3412_cov_31.0393 AUGUSTUS gene 329 2447 . + . ID=g12890;Name=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS mRNA 329 2447 . + . ID=g12890.t1;Parent=g12890;Name=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS exon 329 424 . + . ID=g12890.t1.exon1;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS CDS 329 424 . + 0 ID=cds.g12890.t1;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS exon 712 921 . + . ID=g12890.t1.exon2;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS CDS 712 921 . + 0 ID=cds.g12890.t1;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS exon 1296 1389 . + . ID=g12890.t1.exon3;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS CDS 1296 1389 . + 0 ID=cds.g12890.t1;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS exon 1888 1965 . + . ID=g12890.t1.exon4;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS CDS 1888 1965 . + 2 ID=cds.g12890.t1;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS exon 2155 2447 . + . ID=g12890.t1.exon5;Parent=g12890.t1 NODE_3463_length_3412_cov_31.0393 AUGUSTUS CDS 2155 2447 . + 2 ID=cds.g12890.t1;Parent=g12890.t1 #PROT g12890.t1 g12890 MRLFMLAAAFAAVVTLALGDGNVTSACVRDQESHIVIEVPKGKNIYLREGPGGDIILDGPSATAIIGGNPSLLVNVASLLERTLAAERNLATLLTRMQAMEQMLNSTIASNAQLAAQLSDTIANDVQLRPIKVTTFSWGPPLLLERGRYRFAVELLPSTVDADGATPKPAKKSYTVQMQVYLNQRPGLADRFTVTVDSAAYPCDKISCPVIPIRSSLYPDLSGGGTVYQPRIDFFRTEGGKQFTAYNLRLELMAYV* # PASA_UPDATE: g8146.t1, single gene model update, valid-1, status:[pasa:asmbl_5159,status:12], valid-1 NODE_2873_length_4878_cov_35.9661 . gene 368 1934 . + . ID=g8146;Name=g8146.t1 NODE_2873_length_4878_cov_35.9661 . mRNA 368 1934 . + . ID=g8146.t1;Parent=g8146;Name=g8146.t1 NODE_2873_length_4878_cov_35.9661 . exon 368 523 . + . ID=g8146.t1.exon1;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . CDS 368 523 . + 0 ID=cds.g8146.t1;Parent=g8146.t1;5_prime_partial=true NODE_2873_length_4878_cov_35.9661 . exon 928 951 . + . ID=g8146.t1.exon2;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . CDS 928 951 . + 0 ID=cds.g8146.t1;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . exon 1274 1317 . + . ID=g8146.t1.exon3;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . CDS 1274 1317 . + 0 ID=cds.g8146.t1;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . exon 1543 1934 . + . ID=g8146.t1.exon4;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . CDS 1543 1672 . + 1 ID=cds.g8146.t1;Parent=g8146.t1 NODE_2873_length_4878_cov_35.9661 . three_prime_UTR 1673 1934 . + . ID=g8146.t1.utr3p1;Parent=g8146.t1 #PROT g8146.t1 g8146 GYADAERAPVEFSIAPADAIPKALHRANAQKRDIEFIEINEAFASVVLANIKILGLDPSKVNINGGAVSLGHPIGMSGARLVTHLTHLLQSRPSGTKALASICNGGGGASAIVIERF* # PASA_UPDATE: g8147.t1, single gene model update, valid-1, status:[pasa:asmbl_5158,status:12], valid-1 NODE_2873_length_4878_cov_35.9661 . gene 2539 4594 . - . ID=g8147;Name=g8147.t1 NODE_2873_length_4878_cov_35.9661 . mRNA 2539 4594 . - . ID=g8147.t1;Parent=g8147;Name=g8147.t1 NODE_2873_length_4878_cov_35.9661 . five_prime_UTR 4571 4594 . - . ID=g8147.t1.utr5p1;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . five_prime_UTR 4220 4280 . - . ID=g8147.t1.utr5p2;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . exon 4571 4594 . - . ID=g8147.t1.exon1;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . exon 4203 4280 . - . ID=g8147.t1.exon2;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . CDS 4203 4219 . - 0 ID=cds.g8147.t1;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . exon 3211 4045 . - . ID=g8147.t1.exon3;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . CDS 3211 4045 . - 1 ID=cds.g8147.t1;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . exon 2539 2866 . - . ID=g8147.t1.exon4;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . CDS 2648 2866 . - 0 ID=cds.g8147.t1;Parent=g8147.t1 NODE_2873_length_4878_cov_35.9661 . three_prime_UTR 2539 2647 . - . ID=g8147.t1.utr3p1;Parent=g8147.t1 #PROT g8147.t1 g8147 MQLMNMLTRAAGGESESRRSSLLPRQSISGGIHTSDTGNSTPRPSALAESGQETGSPSSPRVSEAVGVSIQTTEVEEPTETARIVRRPTRISLSLRPSIAASTRDLFNAAPPDANTPMSPHTPDCEDPPMFPIGPSKPTLGRLSDTGFGLARGGLMGSAMNLAGLKGSRMNLASIAVPQQGGGLGAFGASLVNLNAGTGNGHGLGADGGGGGGGEGASGKREGAASGAGGVLASGVAKAAGMGSASTLNSSPSAVPKVLRYQDGEIIQRHDSFTRTKSKLPSLSREGGDTGSRANSLADPMSSPSSARRPEQEQQRQQQPQAHVPAGLPVTVTTDGDGQPVLTVSVDIAPEDESTA* # ORIGINAL: g2942.t1 original gene structure, not modified by PASA NODE_7876_length_401_cov_25.9877_potentialcontaminant AUGUSTUS gene 2 401 . + . ID=g2942;Name=g2942.t1 NODE_7876_length_401_cov_25.9877_potentialcontaminant AUGUSTUS mRNA 2 401 . + . ID=g2942.t1;Parent=g2942;Name=g2942.t1 NODE_7876_length_401_cov_25.9877_potentialcontaminant AUGUSTUS exon 2 401 . + . ID=g2942.t1.exon1;Parent=g2942.t1 NODE_7876_length_401_cov_25.9877_potentialcontaminant AUGUSTUS CDS 2 401 . + 0 ID=cds.g2942.t1;Parent=g2942.t1 #PROT g2942.t1 g2942 AVALTRAIVNPAVCPPPALAKRLFVEGILSKRASAADASIPLRTAALLGMCEFVHPRSEWGSTTEVVGAAAAVDSRTAKENSADPPAVLSIARPPTKGPSHWNFLCDTAHAADTWQVVRDAMACPDAGARGEA # ORIGINAL: g8563.t1 original gene structure, not modified by PASA NODE_3023_length_4516_cov_25.635 AUGUSTUS gene 887 3700 . + . ID=g8563;Name=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS mRNA 887 3700 . + . ID=g8563.t1;Parent=g8563;Name=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS exon 887 970 . + . ID=g8563.t1.exon1;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS CDS 887 970 . + 0 ID=cds.g8563.t1;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS exon 1139 1378 . + . ID=g8563.t1.exon2;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS CDS 1139 1378 . + 0 ID=cds.g8563.t1;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS exon 1745 3191 . + . ID=g8563.t1.exon3;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS CDS 1745 3191 . + 0 ID=cds.g8563.t1;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS exon 3453 3503 . + . ID=g8563.t1.exon4;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS CDS 3453 3503 . + 2 ID=cds.g8563.t1;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS exon 3642 3700 . + . ID=g8563.t1.exon5;Parent=g8563.t1 NODE_3023_length_4516_cov_25.635 AUGUSTUS CDS 3642 3700 . + 2 ID=cds.g8563.t1;Parent=g8563.t1 #PROT g8563.t1 g8563 MSLISRFCRCPSAGALLLAVVLATLSCTDAQRGTLAVTLGQASISRSDCNDDIGFISNACDPYFNIVIENVGSTATCNSNSDSYISKPGNPFEASKFTCKSSIPVVWANSMKLIVSATDYDGGTIFNSDDFIGSGSGTFDLSKSTTGRVTIGSGSWAEFAVTFTCAEPYFSPSSLCSTYCLPSATCSGHGTCTAAGACSCSGNYAGATCNECKTNYYGASCTQCPTTCGTAVPSCVDKIGGSGNCLSCPGDTYGPTCTGQCKCASSADCNKGVSGTGTCTACLAGQYGPQCLSACNCNGGTCRDGPGGNGACLTCTSGRYGPVCAGVCNCNGGTCADGLSGNGACLSCPKDKWGPNCLSACTCNGGVCADGPTGNGKCTSCPSGRFGASCASTCSCNGGVCNEGPLGDGKCTSCPANKYGLNCASSCACNGGTCQDGPAGTGKCLTCVSGRYGLTCQTSCNCNGGACKDGPTGDGTCLNCTKGRYGQNCQFTCACNGGGCVDGLTGTGVCLACSTGRYGPSCENMCDCSGGACVDGLTGNGTCLNCTSGRYGANCQNACVCNGGTCSDGIGGTGVCITCLAGRYDPQCAKSCSAGCTNTCFDGINGNELNLTDFSAGVDELMPEAF* # PASA_UPDATE: g1788.t1, single gene model update, valid-1, status:[pasa:asmbl_9422,status:12],[pasa:asmbl_9423,status:12], valid-1 NODE_798_length_17600_cov_38.5686 . gene 3256 12688 . + . ID=g1788;Name=g1788.t1 NODE_798_length_17600_cov_38.5686 . mRNA 3256 12688 . + . ID=g1788.t1;Parent=g1788;Name=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 3256 3518 . + . ID=g1788.t1.exon1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 3256 3518 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 4260 4335 . + . ID=g1788.t1.exon2;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 4260 4335 . + 1 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 4446 4528 . + . ID=g1788.t1.exon3;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 4446 4528 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 4670 4838 . + . ID=g1788.t1.exon4;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 4670 4838 . + 1 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 5193 5385 . + . ID=g1788.t1.exon5;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 5193 5385 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 5656 5852 . + . ID=g1788.t1.exon6;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 5656 5852 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 6024 6116 . + . ID=g1788.t1.exon7;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 6024 6116 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 6365 6425 . + . ID=g1788.t1.exon8;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 6365 6425 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 6703 6758 . + . ID=g1788.t1.exon9;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 6703 6758 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 6975 7035 . + . ID=g1788.t1.exon10;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 6975 7035 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 7312 7346 . + . ID=g1788.t1.exon11;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 7312 7346 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 7611 7756 . + . ID=g1788.t1.exon12;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 7611 7756 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 8043 8239 . + . ID=g1788.t1.exon13;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 8043 8239 . + 1 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 8445 8579 . + . ID=g1788.t1.exon14;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 8445 8579 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 8829 8890 . + . ID=g1788.t1.exon15;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 8829 8890 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 9147 9270 . + . ID=g1788.t1.exon16;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 9147 9270 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 9403 9503 . + . ID=g1788.t1.exon17;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 9403 9503 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 9759 9988 . + . ID=g1788.t1.exon18;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 9759 9988 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 10225 10378 . + . ID=g1788.t1.exon19;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 10225 10378 . + 1 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 10658 10790 . + . ID=g1788.t1.exon20;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 10658 10790 . + 0 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 11132 11252 . + . ID=g1788.t1.exon21;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 11132 11252 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 11413 11492 . + . ID=g1788.t1.exon22;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 11413 11492 . + 1 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 11777 11863 . + . ID=g1788.t1.exon23;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 11777 11863 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 12090 12218 . + . ID=g1788.t1.exon24;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 12090 12218 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . exon 12476 12688 . + . ID=g1788.t1.exon25;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . CDS 12476 12681 . + 2 ID=cds.g1788.t1;Parent=g1788.t1 NODE_798_length_17600_cov_38.5686 . three_prime_UTR 12682 12688 . + . ID=g1788.t1.utr3p1;Parent=g1788.t1 #PROT g1788.t1 g1788 MAESSPQSRIPFDVGHTQKYQRITVERIEKFVSDTYFTDVNLYGQIYLDRLAISRIGHYAAPGRISYHDAVEATYADIETSGQSFGPSAICDNIPARRGGRMINATGCDTAQLALTGGNGCDARKEFIVTNNATGGESIELYVEMACNGMFGVGNNGLINPPDANRRFSIETCELAVFNRPAWELFIDLNTLVDIAKNSPVGENGLSETASLCANAIVNRVDPGDPGTYAAGRRIAVDFFSKHNGPNAFKVTAIGHCHIDTETIRKCARSWCTQLRLMDLYPSFKFCASQAQQYAWMKENYPELYARILGAASTGRFVPVGGVWVEMDGNIPSGESFVRQFMYGQRFFEQEFGFRCTEFFLPDTFGYSAQLPQIMRSAGIESFVTQKLSWNLINKFPHSTFWWEGIDGSRVLTHFPPADTYNSQADAKDLLKSRSNFKDHGRSNNALMLFGNGDGGGGPNPRMIESLLRLADVNGCPSVEIRDVRAFFEDVRREKGDLVTWVGELYLELHRGTYTTHADTKKGNRLGEVALGEAELFATMAACGNGGYEYPRRELERLWKLLLLNQFHDVLPGSSIGDVYADTRRHHAEILSVARDIRSSAVKALLGSNGGERAAALNGLGWARKEIVRIPKGTFGIRGAQESALDDVVYAIVSIPPFAAKVIDATEASLTSEQHGLPPVTVSETPEGSVVLENAHVVCTVKGGIITGLLHKKSGRECVAPSFSSADSNSAAVGLNRLRLYEDVPLFWDAWDAEIYHLEKSKAVPPGRMCVVDKGPLVASVRVLYDSVGDASKAEQIIELDCVSECVRIKTKVDWHERHQFLKAEFGVDIRSAVGTYGIQYGHIQRPTHSNTTWDMAKFEVCAHGWMDLSEHGFGVSILTDHKYGHGIAGNTMRLSLLRSPKAPDESADMGENVFEYAVLPHAGTPHDAGVARIARTLSSPIDVVAVGAHCGGTDTHSLFSCDAATVVLDAVKLAEDTHDVILRLYEGSGATVPCVNISSRNRIVRVTRVTILEDALALTPTDTDGKKSRSGACVTLDDATNSIRLTNLRPFELVSLAIEMSE* # PASA_UPDATE: g1786.t1, single gene model update, valid-1, status:[pasa:asmbl_9421,status:12],[pasa:asmbl_9426,status:12], valid-1 NODE_798_length_17600_cov_38.5686 . gene 222 1625 . + . ID=g1786;Name=g1786.t1 NODE_798_length_17600_cov_38.5686 . mRNA 222 1625 . + . ID=g1786.t1;Parent=g1786;Name=g1786.t1 NODE_798_length_17600_cov_38.5686 . exon 222 306 . + . ID=g1786.t1.exon1;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . CDS 222 306 . + 0 ID=cds.g1786.t1;Parent=g1786.t1;5_prime_partial=true NODE_798_length_17600_cov_38.5686 . exon 509 619 . + . ID=g1786.t1.exon2;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . CDS 509 619 . + 2 ID=cds.g1786.t1;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . exon 757 875 . + . ID=g1786.t1.exon3;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . CDS 757 875 . + 2 ID=cds.g1786.t1;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . exon 1034 1123 . + . ID=g1786.t1.exon4;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . CDS 1034 1123 . + 0 ID=cds.g1786.t1;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . exon 1256 1625 . + . ID=g1786.t1.exon5;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . CDS 1256 1396 . + 0 ID=cds.g1786.t1;Parent=g1786.t1 NODE_798_length_17600_cov_38.5686 . three_prime_UTR 1397 1625 . + . ID=g1786.t1.utr3p1;Parent=g1786.t1 #PROT g1786.t1 g1786 QGIDRLAVTAGISLSVDPYLKSVLASLNTNPSFDVKVWYNMLILYAASVGSLAAKDTSGYRTWIDGHENNAHCTAVAAQALSTAFLGLTPTEPFYIAEAHREMVTILSVLLLRVKLEGDKELAKEIDSVLIIIDKFVQESKFLSADVLEQCYPYMLVRSAYHDHFVRAAERSRRVSEAAGE* # ORIGINAL: g1787.t1 original gene structure, not modified by PASA NODE_798_length_17600_cov_38.5686 AUGUSTUS gene 2032 2816 . - . ID=g1787;Name=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS mRNA 2032 2816 . - . ID=g1787.t1;Parent=g1787;Name=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS exon 2700 2816 . - . ID=g1787.t1.exon1;Parent=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS CDS 2700 2816 . - 0 ID=cds.g1787.t1;Parent=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS exon 2258 2518 . - . ID=g1787.t1.exon2;Parent=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS CDS 2258 2518 . - 0 ID=cds.g1787.t1;Parent=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS exon 2032 2094 . - . ID=g1787.t1.exon3;Parent=g1787.t1 NODE_798_length_17600_cov_38.5686 AUGUSTUS CDS 2032 2094 . - 0 ID=cds.g1787.t1;Parent=g1787.t1 #PROT g1787.t1 g1787 MKVVRVAVGVIVDAAGRFFISLRRKEAHLGGLWEFPGGKAHAEETDLAALERELTEEVGITPIEPTTLVSVTRDYPADGISICLSSYLVTKWSGSPHSAEGQIVRWVALDELKALPMPPANAVIKEAIEAWTHTRAHAGAHALSSV* # PASA_UPDATE: g1789.t1, single gene model update, valid-1, status:[pasa:asmbl_9424,status:12],[pasa:asmbl_9425,status:12], valid-1 NODE_798_length_17600_cov_38.5686 . gene 13062 17525 . - . ID=g1789;Name=g1789.t1 NODE_798_length_17600_cov_38.5686 . mRNA 13062 17525 . - . ID=g1789.t1;Parent=g1789;Name=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 17464 17525 . - . ID=g1789.t1.exon1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 17464 17525 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 17277 17362 . - . ID=g1789.t1.exon2;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 17277 17362 . - 1 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 16906 17026 . - . ID=g1789.t1.exon3;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 16906 17026 . - 2 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 16599 16684 . - . ID=g1789.t1.exon4;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 16599 16684 . - 1 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 16277 16356 . - . ID=g1789.t1.exon5;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 16277 16356 . - 2 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 15756 16133 . - . ID=g1789.t1.exon6;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 15756 16133 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 15285 15415 . - . ID=g1789.t1.exon7;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 15285 15415 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 14822 14957 . - . ID=g1789.t1.exon8;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 14822 14957 . - 1 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 14456 14590 . - . ID=g1789.t1.exon9;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 14456 14590 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 14140 14211 . - . ID=g1789.t1.exon10;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 14140 14211 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 13793 14006 . - . ID=g1789.t1.exon11;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 13793 14006 . - 0 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . exon 13062 13463 . - . ID=g1789.t1.exon12;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . CDS 13369 13463 . - 2 ID=cds.g1789.t1;Parent=g1789.t1 NODE_798_length_17600_cov_38.5686 . three_prime_UTR 13062 13368 . - . ID=g1789.t1.utr3p1;Parent=g1789.t1 #PROT g1789.t1 g1789 MSTDATLRPSVKAWSHVLSITYLLGDQLKGESSVEAYIRALMRGCRCVELDCWDGPNNEPIIYHGHTLTSKILFKDVIATVRDYAFKTSPYPVVLSIENHCSVPQQTVMAKHCVDILGDMLLCNRIDPDSAYPSPEQLKGKILIKGKKLPGSNATEAELALINADDDESEDDVKETLELTLASVHIADQEESKQTEAHRLALKSEAAAATHSPATKKKSFLSSLSLKKKKDGAGAGTDGADEGGKSPKPPAKKAHGANVAQELSDIVAYFQTVGFKTFADSAKSAKFYQMSSFAEAKTRRLAEKQSWEFIGYNRRQMSRIYPSGARVDSSNYQPQPAWNVGCQIVALNYQSSDAPVQLNEGRFSINGKCGYTLKPAYLRAADWPAFDIGGSEAIPKVDVMQLSIKIISATQLPKPYNETKGEVIDPYVVVSIVGRTCDSICCKTSVIDDNGFNPVWNESFEFNLTAADLALVHLTVMDKDTASRDDFIGQNCIPVTSLANGFRHIPMKTASGDVMPNATLFVKLGLKPLSS* # PASA_UPDATE: g10704.t1, single gene model update, valid-1, status:[pasa:asmbl_1337,status:12], valid-1 NODE_1363_length_11750_cov_41.3108 . gene 10566 11750 . + . ID=g10704;Name=g10704.t1 NODE_1363_length_11750_cov_41.3108 . mRNA 10566 11750 . + . ID=g10704.t1;Parent=g10704;Name=g10704.t1 NODE_1363_length_11750_cov_41.3108 . five_prime_UTR 10566 10850 . + . ID=g10704.t1.utr5p1;Parent=g10704.t1 NODE_1363_length_11750_cov_41.3108 . exon 10566 11750 . + . ID=g10704.t1.exon1;Parent=g10704.t1 NODE_1363_length_11750_cov_41.3108 . CDS 10851 11750 . + 0 ID=cds.g10704.t1;Parent=g10704.t1;3_prime_partial=true #PROT g10704.t1 g10704 MHSASGYGKGYPMQSAHPHTRHEALAREDTSRIAHLYFAASRLAEAFHPGLRLTTRFTAEAHIHISAVSDAHWEHIKGMATHLLQVSNMDIIDVVDSERIISLGTRIFVVDEVAPPWGQYHPLQPSFATWGPYGAHPSEIPHPHPTAHYRGGAGYPPVAVDTRGAPMTTARMYSPRHAQAHPLGQGLPPLADGVDVQVPPPQAPPPPPQGDSAPPPPRAEPNNPQRHPSPRAMVNQPISSGGAHCIFCESGDRPGKLFKDLSRHMFRHFDAFEADGATGSHVLSIFHRVRYGDTQGLADI # ORIGINAL: g10701.t1 original gene structure, not modified by PASA NODE_1363_length_11750_cov_41.3108 AUGUSTUS gene 133 1164 . + . ID=g10701;Name=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS mRNA 133 1164 . + . ID=g10701.t1;Parent=g10701;Name=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS exon 133 241 . + . ID=g10701.t1.exon1;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS CDS 133 241 . + 0 ID=cds.g10701.t1;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS exon 391 497 . + . ID=g10701.t1.exon2;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS CDS 391 497 . + 2 ID=cds.g10701.t1;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS exon 598 711 . + . ID=g10701.t1.exon3;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS CDS 598 711 . + 0 ID=cds.g10701.t1;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS exon 1117 1164 . + . ID=g10701.t1.exon4;Parent=g10701.t1 NODE_1363_length_11750_cov_41.3108 AUGUSTUS CDS 1117 1164 . + 0 ID=cds.g10701.t1;Parent=g10701.t1 #PROT g10701.t1 g10701 TGKPKGYAFVQFKFEEVAEIAAETMNNYLMFNRLLKCKIMPADKVHKDLFKGANKKFKRVPWQRIERLRRQKSREDPKQHKAVVGKLLKSEEKKRKRIEELGIDYDFPGYTATAIPAAKKQRFND* # PASA_UPDATE: g10703.t1, single gene model update, valid-1, status:[pasa:asmbl_1339,status:12], valid-1 # PASA_UPDATE: g10703.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1338,status:12], valid-1 NODE_1363_length_11750_cov_41.3108 . gene 7707 10084 . + . ID=g10703;Name=g10703.t1 NODE_1363_length_11750_cov_41.3108 . mRNA 7708 10084 . + . ID=g10703.t1;Parent=g10703;Name=g10703.t1 NODE_1363_length_11750_cov_41.3108 . five_prime_UTR 7708 7741 . + . ID=g10703.t1.utr5p1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 7708 7795 . + . ID=g10703.t1.exon1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . CDS 7742 7795 . + 0 ID=cds.g10703.t1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 7918 8013 . + . ID=g10703.t1.exon2;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . CDS 7918 8013 . + 0 ID=cds.g10703.t1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 8155 8462 . + . ID=g10703.t1.exon3;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . CDS 8155 8462 . + 0 ID=cds.g10703.t1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 8591 8651 . + . ID=g10703.t1.exon4;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . CDS 8591 8651 . + 1 ID=cds.g10703.t1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 8799 9651 . + . ID=g10703.t1.exon5;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . CDS 8799 9632 . + 0 ID=cds.g10703.t1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . exon 9813 10084 . + . ID=g10703.t1.exon6;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . three_prime_UTR 9633 9651 . + . ID=g10703.t1.utr3p1;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . three_prime_UTR 9813 10084 . + . ID=g10703.t1.utr3p2;Parent=g10703.t1 NODE_1363_length_11750_cov_41.3108 . mRNA 7707 10084 . + . ID=g10703.t1.1.5b6be70a;Parent=g10703;Name=g10703.t1 NODE_1363_length_11750_cov_41.3108 . five_prime_UTR 7707 7741 . + . ID=g10703.t1.1.5b6be70a.utr5p1;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . exon 7707 7795 . + . ID=g10703.t1.1.5b6be70a.exon1;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . CDS 7742 7795 . + 0 ID=cds.g10703.t1.1.5b6be70a;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . exon 7918 8013 . + . ID=g10703.t1.1.5b6be70a.exon2;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . CDS 7918 8013 . + 0 ID=cds.g10703.t1.1.5b6be70a;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . exon 8155 8462 . + . ID=g10703.t1.1.5b6be70a.exon3;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . CDS 8155 8462 . + 0 ID=cds.g10703.t1.1.5b6be70a;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . exon 8591 8651 . + . ID=g10703.t1.1.5b6be70a.exon4;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . CDS 8591 8651 . + 1 ID=cds.g10703.t1.1.5b6be70a;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . exon 8799 10084 . + . ID=g10703.t1.1.5b6be70a.exon5;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . CDS 8799 9632 . + 0 ID=cds.g10703.t1.1.5b6be70a;Parent=g10703.t1.1.5b6be70a NODE_1363_length_11750_cov_41.3108 . three_prime_UTR 9633 10084 . + . ID=g10703.t1.1.5b6be70a.utr3p1;Parent=g10703.t1.1.5b6be70a #PROT g10703.t1 g10703 MFSLWTAYSVMDTLQGKEHPFAWTYVPVKRARDSVAVFDADIPIPVPLTTQHKDEGNHRLPVVGTAESIYDAIFGEGEKDACEPREEFTCMISGCISTFNSHRAYESHYASAHVNVCRYCHFVLASAHLLDLHLLERHDSLFHVMSKKRDMYRCLVEGCPSVFKHNKARKEHLVEVHCYPKDFKFNPTRRKPQPSQHAPASTATDAPRTQSTMKDATVVRDVSTGNVNSSQQGLPASNTSVSVFERASVGSNPPGGKKKPSAKRHTKNNTGSTVCSGPALSATSQPDNCVSLQPAGDVDMDGTAAGDAATAGGVGVKPNRALRRAASRASRPPTDGSPSSSIVGMPLGEISGNATSVVQSHADAMTCDVAHSPSVQLVPHRTDVGDIGGNSDAPMDVDMLTEAMSKATIHVPRSVSFGRKRGSGLYRPPRSQAKHVTAAPGATASGDAME* #PROT g10703.t1.1.5b6be70a g10703 MFSLWTAYSVMDTLQGKEHPFAWTYVPVKRARDSVAVFDADIPIPVPLTTQHKDEGNHRLPVVGTAESIYDAIFGEGEKDACEPREEFTCMISGCISTFNSHRAYESHYASAHVNVCRYCHFVLASAHLLDLHLLERHDSLFHVMSKKRDMYRCLVEGCPSVFKHNKARKEHLVEVHCYPKDFKFNPTRRKPQPSQHAPASTATDAPRTQSTMKDATVVRDVSTGNVNSSQQGLPASNTSVSVFERASVGSNPPGGKKKPSAKRHTKNNTGSTVCSGPALSATSQPDNCVSLQPAGDVDMDGTAAGDAATAGGVGVKPNRALRRAASRASRPPTDGSPSSSIVGMPLGEISGNATSVVQSHADAMTCDVAHSPSVQLVPHRTDVGDIGGNSDAPMDVDMLTEAMSKATIHVPRSVSFGRKRGSGLYRPPRSQAKHVTAAPGATASGDAME* # PASA_UPDATE: g10702.t1, single gene model update, valid-1, status:[pasa:asmbl_1336,status:3], valid-1 NODE_1363_length_11750_cov_41.3108 . gene 1518 6389 . - . ID=g10702;Name=g10702.t1 NODE_1363_length_11750_cov_41.3108 . mRNA 1518 6389 . - . ID=g10702.t1;Parent=g10702;Name=g10702.t1 NODE_1363_length_11750_cov_41.3108 . five_prime_UTR 6321 6389 . - . ID=g10702.t1.utr5p1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 6318 6389 . - . ID=g10702.t1.exon1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 6318 6320 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 6035 6131 . - . ID=g10702.t1.exon2;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 6035 6131 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 5695 5823 . - . ID=g10702.t1.exon3;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 5695 5823 . - 2 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 5417 5526 . - . ID=g10702.t1.exon4;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 5417 5526 . - 2 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 4976 5215 . - . ID=g10702.t1.exon5;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 4976 5215 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 4552 4703 . - . ID=g10702.t1.exon6;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 4552 4703 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 4048 4319 . - . ID=g10702.t1.exon7;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 4048 4319 . - 1 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 3733 3855 . - . ID=g10702.t1.exon8;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 3733 3855 . - 2 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 3265 3443 . - . ID=g10702.t1.exon9;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 3265 3443 . - 2 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 2849 3052 . - . ID=g10702.t1.exon10;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 2849 3052 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 2447 2607 . - . ID=g10702.t1.exon11;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 2447 2607 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 2153 2258 . - . ID=g10702.t1.exon12;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 2153 2258 . - 1 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . exon 1518 1985 . - . ID=g10702.t1.exon13;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . CDS 1896 1985 . - 0 ID=cds.g10702.t1;Parent=g10702.t1 NODE_1363_length_11750_cov_41.3108 . three_prime_UTR 1518 1895 . - . ID=g10702.t1.utr3p1;Parent=g10702.t1 #PROT g10702.t1 g10702 MAGALENARAGMPKLRDEERESRYGYVFSVSGPVVTADHMTGAAMYELVRVGHFELVGEIIRLEGDTATIQVYEETSGVTVGDPVLRTGKPLSVELGPGLMASIYDGIQRPLKDIAVQTTSIYVPRGINTPALSKEIAWYFQPAPIRVGDHIVGGDIYGLVQENTLIRHKIMLPPKARGTVTYIAPAGNYTLQDTILETEFQGRVSKFSLYQVWPVRQPRPVSEKLAANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELDMEVNGVKESIMKRTTLVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVSCLGSPQRLGSVSIVGAVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSVNWLLSYSKYLKALDQYYEEFDADFVGFRRKIQEILQLEEDLSEIVQLVGKGSLAESDKITLEVAKLIRDDFLQQNGYSSYDRFCPFYKTVGMMRNICLFYDLARHSVETTAQSDRKITWSVIKENMGDLMYELSSMKFQEPANGEAAVKAHYAKLAEKMHAQFRALED* # ORIGINAL: g6703.t1 original gene structure, not modified by PASA NODE_735_length_18390_cov_41.353 AUGUSTUS gene 10127 16205 . - . ID=g6703;Name=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS mRNA 10127 16205 . - . ID=g6703.t1;Parent=g6703;Name=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 13563 16205 . - . ID=g6703.t1.exon1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 13563 16205 . - 0 ID=cds.g6703.t1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 12825 12995 . - . ID=g6703.t1.exon2;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 12825 12995 . - 0 ID=cds.g6703.t1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 12590 12647 . - . ID=g6703.t1.exon3;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 12590 12647 . - 0 ID=cds.g6703.t1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 11635 12305 . - . ID=g6703.t1.exon4;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 11635 12305 . - 2 ID=cds.g6703.t1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 10481 11167 . - . ID=g6703.t1.exon5;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 10481 11167 . - 0 ID=cds.g6703.t1;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 10127 10216 . - . ID=g6703.t1.exon6;Parent=g6703.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 10127 10216 . - 0 ID=cds.g6703.t1;Parent=g6703.t1 #PROT g6703.t1 g6703 MSEAKRNMHLLLSVLCTSYLFCLTSAVARDGDLHLPRGRLVACTATLHVSALNGDDVANDGSLQRPFRSLHRSLVDGDHTLSLCIIVHPGVYSGIANVGVNLTSGTSVYIGGAMSDADQRTAATRQQQPTFACDESHSLLFAISATNNTALMIEGVQYENCTRGAVLIAGGSLSIASVSFVNNNGAVTAERVSDVTIGMSLFVHNAAPVLTVLDARSCVLYNVTMKGKSAGCSAANVCPCVDVSADAVAITNTTLMDYDSGFRVLSANTLIRRCALLRTAHTVVEIRGMGPLFPAMPGARTSPATATLDATTLDAFGTGVSATDVDVTLTECMFSRGDVGVLLAVTEPWTLARLRVDLSSFSSVGASGVVTGRPCIDTAGVALISNTQFMLCGSVCLGVHGTFPDAVLLVSAVSNSTFNNTRIHAANSITLSHSALVGNAGHASAAVNLAPSSSIRVDGCVFSDNDGPAIASLGPTSSVDITASLFKRNCIATPVSANGDCSVIVASGQIVVVNGTFNGNLGPFSVAGASTALFDGCSFASNSNAASNGSLCTAIDAIATSPSRDLGSAAVHIRGCTFRFNGCTPGASSASSSSLYGAVCTRGQELHVSDSSFLHNCALSAGGAVAAWAARVSIIRTVAEGNVAGVRGGAVFIANQLGEWTISGSRIPSPPCDMTSLSIEGSQFRSNAASSAGGAIYLDNVPIPDDLSTALFIGNRVTGMGASYGPDMATEPDRIDILSQAGKSAAINGVIVVTPGLAVAKDIVVVRIVDRLQQTCANVDETLSLSLLRDGADNATVALSGSTILDLRSRDALDMASFSGEMFVGPIGSSSILVVSALSKAIETGYAPLSLGNCTEGLMYDDHTGRCVACAPGTFSFGGGEPCPPRGALCPNGVLVVEENYWRSNRTSDNIYRCQVSCGLGSFCTVCLGNDTCAAHHKGVLCSQCDDGYTIDGHSCIECRGFRPIPFVIFFLVNVAIVAFLHFNTESDSILKIAVNYVQSLLLLSPDLAFLHLDSVFGGGLGMSTASGGTVFWQCIYPFDFYGAFITGLSYPFFRIGILLVIYAAERTFAAVASQQTTVTPRDQRGHDSNDMSDSEGARLLSDPVEGYGTQSGVAFENDTGGDDVEGGNDVDSGVRTTVSVVRRDESAASASRRTSIASTTSPEMYESDDDADADDGISSGANSSAAQRYSRSIIAILLFSYVPTTRTILSYFSIVSIDNVRVLATSPSISVDDADYTRLYPLAVAASIAWIAGVPVMLTLLCVRASMGNAGSKTGPLPSRMPLHLSVLCDTYRKGFRAFEVYALSRRIVLMVLLLILADDQWLVQAICRVAACFLFAVIHDITRPFLKAPVALVPFGRLRRWTVSCNVVEATCLWFLVMASVLLVQLSAHANAPRTGPTPRALTAITFACEAPARGSLGKEAAYGSLADARIARSPCE* # ORIGINAL: g6702.t1 original gene structure, not modified by PASA NODE_735_length_18390_cov_41.353 AUGUSTUS gene 5775 7586 . + . ID=g6702;Name=g6702.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS mRNA 5775 7586 . + . ID=g6702.t1;Parent=g6702;Name=g6702.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 5775 7586 . + . ID=g6702.t1.exon1;Parent=g6702.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 5775 7586 . + 0 ID=cds.g6702.t1;Parent=g6702.t1 #PROT g6702.t1 g6702 MSPDLQHMRRPFRSPQENFDGVTHPVPASPTYGAGRYPPGGRGVAYNASVAETSLMPVHGRNGGHPDFADRQPTTLCQSERSARIVTVRGGPFGVAPPVAVVENKVNNVDKNRTARNKDIHWDSSGERGMLAAMHTVQQQLRKPGNNSLEKPRNTDRKRRRSSSQSESDQPSSRKRRCSSSNKDPIAPNAPVKRPEPSQVAGGVLLHNGGVRLYPNAVNLECVWRFRPASSSPSELGRDAATGITTPGVITSDSSRRPTSRAATPAHNAPVAPKGKLAMRQSRSISTVKKTSTLTDFRRAPQSTAAGSGDRGFGPALNSDPTTKSVQSSQQPGVEMSQAVSAHDGDGYSSARTLPIKAHTESASPAGGREVTPEGTQQATTPPIADRDAGTNLDGWSVAAVARSAGSAVALVDVLGGWLRADLASSVLTDDLVRSAYDPAMSAVPPGASWANVRQPNDRFNDGRQSVVYSPSTSSTSYSTLTEAEELEDLLREPRQFSLYPSTSASTPTDDHYCDETDAVEDDIVTTSDAMADFEAAALSGEESTASLWPVMTAAGAVAVTVLGGLSQLTDLPLAAAEFEFNLTEADFEHWEAGHSGITRGSQ* # ORIGINAL: g6701.t1 original gene structure, not modified by PASA NODE_735_length_18390_cov_41.353 AUGUSTUS gene 409 1917 . - . ID=g6701;Name=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS mRNA 409 1917 . - . ID=g6701.t1;Parent=g6701;Name=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 1649 1917 . - . ID=g6701.t1.exon1;Parent=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 1649 1917 . - 0 ID=cds.g6701.t1;Parent=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 1416 1491 . - . ID=g6701.t1.exon2;Parent=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 1416 1491 . - 1 ID=cds.g6701.t1;Parent=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 409 1191 . - . ID=g6701.t1.exon3;Parent=g6701.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 409 1191 . - 0 ID=cds.g6701.t1;Parent=g6701.t1 #PROT g6701.t1 g6701 MPSTAMTVVDGEQLQEMFDSTQSSANGRGDTLCQKWDVPVDHLDYEYITNCTNGRELEKIVLILRSGEEGMYPHLIEFAEERLKVVSPNSKLLRKEQQPGEIPHEDIEHAKTDIEEWISQMTQRDTQLKKASHLVDPTKQFPPVRMTVTNRDDVIADRAANDDAPGAAHVPRIKGSDYRSWDKFDADAAASAADHPDSASARAGGAQQHPSLAGLTDIERKILSERERLKGNESFKAGDHVAAESFYTRSIAAYETAEAHNNRALVRLRLNRHAEAEADCEYVLAREAGNLKALLRRGCARQGLSNHVGAVQDFNDVLAVQPNDAVALKLVAESLKHVEGTKEEKVARVPVAAASAASKPRKAMVIEEVEDDDDE* # ORIGINAL: g6704.t1 original gene structure, not modified by PASA NODE_735_length_18390_cov_41.353 AUGUSTUS gene 16846 18114 . + . ID=g6704;Name=g6704.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS mRNA 16846 18114 . + . ID=g6704.t1;Parent=g6704;Name=g6704.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS exon 16846 18114 . + . ID=g6704.t1.exon1;Parent=g6704.t1 NODE_735_length_18390_cov_41.353 AUGUSTUS CDS 16846 18114 . + 0 ID=cds.g6704.t1;Parent=g6704.t1 #PROT g6704.t1 g6704 MLYWSPWLHNLALLCVLCLFHAHVCFSIQVDFPSPEYPTLASAIGAAVAAVEDDDATVVVAQGSYDGIGNVMLFFDRVRALRIRGESGEMPVFNCSSLLSSSLESSTQNVHFLHVGTASGLTRLTMENMHIIGCGVAFKVDVMPDASAFHMEMRRLLISDSLEGIRVRRRRGSGNPSLTNVTLAVDDLHCTTTRVCIQQQHSLGLLNTTVSNSIFADCGTAVSVRGQLSGVTGTLDFPGVVVANSSIQRCAVGVDANVPLAIRECTFAHHRFGVTWMSSSVDALSACVVAKSRFRGCDGGMDLLASTATTLLGNSSMRGVLNVSESEFRDGRCSAIVTSGVSVTLHATVFERYRAPTAVYGTCVHVDGPGDVTVTHTHMSECVGAMGSVALNGVSCAVLSEAVIESGWGINGGCVGVRSEREQ # ORIGINAL: g3011.t1 original gene structure, not modified by PASA NODE_7307_length_450_cov_40.2907_potentialcontaminant AUGUSTUS gene 108 313 . + . ID=g3011;Name=g3011.t1 NODE_7307_length_450_cov_40.2907_potentialcontaminant AUGUSTUS mRNA 108 313 . + . ID=g3011.t1;Parent=g3011;Name=g3011.t1 NODE_7307_length_450_cov_40.2907_potentialcontaminant AUGUSTUS exon 108 313 . + . ID=g3011.t1.exon1;Parent=g3011.t1 NODE_7307_length_450_cov_40.2907_potentialcontaminant AUGUSTUS CDS 108 313 . + 2 ID=cds.g3011.t1;Parent=g3011.t1 #PROT g3011.t1 g3011 RVRRCVLFCEDGDVESKQAAQFKDLDAAKGWVALELGMDEGSQVDWARVNGASGVERSVHWAPWKRR* # ORIGINAL: g9497.t1 original gene structure, not modified by PASA NODE_1669_length_9876_cov_38.6691 AUGUSTUS gene 834 2914 . + . ID=g9497;Name=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS mRNA 834 2914 . + . ID=g9497.t1;Parent=g9497;Name=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS exon 834 932 . + . ID=g9497.t1.exon1;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS CDS 834 932 . + 0 ID=cds.g9497.t1;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS exon 1552 1692 . + . ID=g9497.t1.exon2;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS CDS 1552 1692 . + 0 ID=cds.g9497.t1;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS exon 2376 2555 . + . ID=g9497.t1.exon3;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS CDS 2376 2555 . + 0 ID=cds.g9497.t1;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS exon 2816 2914 . + . ID=g9497.t1.exon4;Parent=g9497.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS CDS 2816 2914 . + 0 ID=cds.g9497.t1;Parent=g9497.t1 #PROT g9497.t1 g9497 MRRAPEILTQQGHGKAVDWWSLGALMYDMLTGSLLRRNAALRLGATHDDFAEITSHAFFRNIDWNLLAAKTIEPPFRPKIVSEDDVSNFDPKFTNMTPVDSPVDSKLSESANNIFKGFTYVAPSVMDDLYGNSSGRYNSWCSLEAALAAIPIGWNGEEVKLTSKQLLCEQSQ* # PASA_UPDATE: g9498.t1, single gene model update, valid-1, status:[pasa:asmbl_2282,status:3], valid-1 NODE_1669_length_9876_cov_38.6691 . gene 3646 4833 . - . ID=g9498;Name=g9498.t1 NODE_1669_length_9876_cov_38.6691 . mRNA 3646 4833 . - . ID=g9498.t1;Parent=g9498;Name=g9498.t1 NODE_1669_length_9876_cov_38.6691 . five_prime_UTR 4784 4833 . - . ID=g9498.t1.utr5p1;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . exon 4655 4833 . - . ID=g9498.t1.exon1;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . CDS 4655 4783 . - 0 ID=cds.g9498.t1;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . exon 4378 4443 . - . ID=g9498.t1.exon2;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . CDS 4378 4443 . - 0 ID=cds.g9498.t1;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . exon 3646 4106 . - . ID=g9498.t1.exon3;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . CDS 3981 4106 . - 0 ID=cds.g9498.t1;Parent=g9498.t1 NODE_1669_length_9876_cov_38.6691 . three_prime_UTR 3646 3980 . - . ID=g9498.t1.utr3p1;Parent=g9498.t1 #PROT g9498.t1 g9498 MEAAPADKTINERALRSNGASLDRSRVMVGAVAGATAGILGLTNLQGFMFYFVSHLIFASLMTVKFGTHATDFFKSISALWLDGLLGHVLTFVLFWTLLFGIVHVF* # PASA_UPDATE: g9499.t1, single gene model update, valid-1, status:[pasa:asmbl_2283,status:3], valid-1 NODE_1669_length_9876_cov_38.6691 . gene 5088 8928 . + . ID=g9499;Name=g9499.t1 NODE_1669_length_9876_cov_38.6691 . mRNA 5088 8928 . + . ID=g9499.t1;Parent=g9499;Name=g9499.t1 NODE_1669_length_9876_cov_38.6691 . five_prime_UTR 5088 5247 . + . ID=g9499.t1.utr5p1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 5088 5298 . + . ID=g9499.t1.exon1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 5248 5298 . + 0 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 5582 6564 . + . ID=g9499.t1.exon2;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 5582 6564 . + 0 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 6830 6962 . + . ID=g9499.t1.exon3;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 6830 6962 . + 1 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 7313 7430 . + . ID=g9499.t1.exon4;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 7313 7430 . + 0 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 7840 7918 . + . ID=g9499.t1.exon5;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 7840 7918 . + 2 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 8049 8078 . + . ID=g9499.t1.exon6;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 8049 8078 . + 1 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 8258 8405 . + . ID=g9499.t1.exon7;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 8258 8405 . + 1 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . exon 8573 8928 . + . ID=g9499.t1.exon8;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . CDS 8573 8677 . + 0 ID=cds.g9499.t1;Parent=g9499.t1 NODE_1669_length_9876_cov_38.6691 . three_prime_UTR 8678 8928 . + . ID=g9499.t1.utr3p1;Parent=g9499.t1 #PROT g9499.t1 g9499 MDTAENHEETIGEDATKIDEPVADDPAPTDYTSAELESTDAEMRADDARKRRRDSDDDDAQPGGDDGVGHVAKRVATDATNLDEAATPTTADVSGVHEHSDEADGATVAAEVGVGDGVSGVDSNDNNDIRVNDESDNNDNNDIRANDEEDATGIVSSSGVAGAPSDATAGDSASAENEAKTEAQLRKVDMKSFFGDDDDDDGETFGGFGDKDIEDAPGFQAPSSGSASASGGRKKIPKKAGAKTVPKAPRASSGGAADNNDGSVEDDDANVSKEVSAFDKILGQIKSRRSRGRKLVIDNTVREAVKDFVDKMNQAAVDDLEANKLKKPGVKKIMMLEEVLTEMRKTDLHETLIKEGKLLTAFANWLHPLPDKSLPPESIRTELLRVMNEMNDIERGDVADSGVGQVVAFLRKHPRETLNNRQLAKNLIFKWSRDVFQLADGFQRDDEAIPKMEVTQNVQNAEKARAELQSMTTGKKPGEAGFTYHARVPQPSRKEYVVRPVNSQANAKAGEDVHRKENKLDLRMGQIKAGQMRFSKTKQHAVQMSVSK* # ORIGINAL: g9500.t1 original gene structure, not modified by PASA NODE_1669_length_9876_cov_38.6691 AUGUSTUS gene 9089 9556 . - . ID=g9500;Name=g9500.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS mRNA 9089 9556 . - . ID=g9500.t1;Parent=g9500;Name=g9500.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS exon 9089 9556 . - . ID=g9500.t1.exon1;Parent=g9500.t1 NODE_1669_length_9876_cov_38.6691 AUGUSTUS CDS 9089 9556 . - 0 ID=cds.g9500.t1;Parent=g9500.t1 #PROT g9500.t1 g9500 MQAWLADLFIDTASLQDTVRQIFDLYSTWDEVNWPVELVRLLDKQRMPAQQAVPGTTARNSPLSHSQQQLYMQYHQQLSTAAQLHGPSVQQQAAAQQRSSYAETQRKEAEMSVLRLTDPERYAELQQERYLTSQRAAVAGQQRTASPATMKAPKR* # ORIGINAL: g7843.t1 original gene structure, not modified by PASA NODE_3754_length_2822_cov_31.6742 AUGUSTUS gene 301 2733 . + . ID=g7843;Name=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS mRNA 301 2733 . + . ID=g7843.t1;Parent=g7843;Name=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS exon 301 566 . + . ID=g7843.t1.exon1;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS CDS 301 566 . + 2 ID=cds.g7843.t1;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS exon 777 1499 . + . ID=g7843.t1.exon2;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS CDS 777 1499 . + 0 ID=cds.g7843.t1;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS exon 1701 2076 . + . ID=g7843.t1.exon3;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS CDS 1701 2076 . + 0 ID=cds.g7843.t1;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS exon 2284 2559 . + . ID=g7843.t1.exon4;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS CDS 2284 2559 . + 2 ID=cds.g7843.t1;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS exon 2726 2733 . + . ID=g7843.t1.exon5;Parent=g7843.t1 NODE_3754_length_2822_cov_31.6742 AUGUSTUS CDS 2726 2733 . + 2 ID=cds.g7843.t1;Parent=g7843.t1 #PROT g7843.t1 g7843 RRPFDVNFVARVRRYLNPVSLMFVGAHAASGAVIVVLFVLLVSVDGAMDMIGDGRAALHAAYGAFLGVVCGVDFLWKRRECVWFPSIVQRRLFALKAAFPSLWKHSLHIWIRAAAIVTSVFLLSFVLSPFFSTLDEVSNLFGVGATIWSASVGGLVHAVVAGILAALLWSVRLETLRINVCSPIEFPLSRVSALRTTPSGGVGTYANSGRLRGNALSQQQQQQQQQQYHGSSPFASDTRTHSIPLLTEALADRRNTYIRTLAFVDLSAASRQSPSRRSEVFAVSPGFAAAETLVAVFTACKDAIDTLAARAYAEVDLRRTDGSAIAYGRASSTAPAAQSIGSRAYATPDIATADPLTPLSPLSANAVSANGVTPTRSNLRRLAMPRAASANNSAITAPFTPSSSTSNAVDRPSTTDGLLSRPVTAIRAMLYATHPRERLASVFADVQADVCAIEAVSMLCAASITEDRYGLVQPHLRSVVESLVRCLCALEAVVRAHGATTGTSRSAYGLGLGMAHRFNRDALDDGDHFGVQGPRDPSSDAAAAINVV* # ORIGINAL: g1738.t1 original gene structure, not modified by PASA NODE_1502_length_10885_cov_42.6972 AUGUSTUS gene 2989 10435 . - . ID=g1738;Name=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS mRNA 2989 10435 . - . ID=g1738.t1;Parent=g1738;Name=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 10313 10435 . - . ID=g1738.t1.exon1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 10313 10435 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 9763 9930 . - . ID=g1738.t1.exon2;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 9763 9930 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 9268 9383 . - . ID=g1738.t1.exon3;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 9268 9383 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 8986 9045 . - . ID=g1738.t1.exon4;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 8986 9045 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 8780 8894 . - . ID=g1738.t1.exon5;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 8780 8894 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 8431 8565 . - . ID=g1738.t1.exon6;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 8431 8565 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 8166 8259 . - . ID=g1738.t1.exon7;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 8166 8259 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 6475 8046 . - . ID=g1738.t1.exon8;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 6475 8046 . - 2 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 6005 6363 . - . ID=g1738.t1.exon9;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 6005 6363 . - 2 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 5620 5849 . - . ID=g1738.t1.exon10;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 5620 5849 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 5319 5481 . - . ID=g1738.t1.exon11;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 5319 5481 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 5035 5160 . - . ID=g1738.t1.exon12;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 5035 5160 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 4788 4840 . - . ID=g1738.t1.exon13;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 4788 4840 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 4499 4584 . - . ID=g1738.t1.exon14;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 4499 4584 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 4282 4358 . - . ID=g1738.t1.exon15;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 4282 4358 . - 2 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 3740 3936 . - . ID=g1738.t1.exon16;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 3740 3936 . - 0 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 3338 3466 . - . ID=g1738.t1.exon17;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 3338 3466 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 2989 3058 . - . ID=g1738.t1.exon18;Parent=g1738.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 2989 3058 . - 1 ID=cds.g1738.t1;Parent=g1738.t1 #PROT g1738.t1 g1738 MATINKLLIQGIRSFSQQDEAVIEFFCPLTLIVGPNGAGKTIADVTEVKARVKFQFTGVDGQRYVCMRALQATQKAKKLESRTLDNSLLIVNPRSGEQTRMSSKCADIDRMMQISLGVSRAILENVIFCHQEESSWPLSEPSVLKKKFDDIFGSTRYMKALDSIKLSKKEMMDELKVLDVSVKDLDLRKKSAQQKRGELRRLQTKMRELEDDVREFQQQINPIETEISNIKEADADIRRLEQDRAKAEARCQEMAQGLQSLRGQLDREYTESDEDLAHLLSDFTREVERAQAALQDQRRRHDATVIEIRAQDEKRTTLISDRARLGAEADINARRLEERQRLLISLQGMHQVDMRFSSPITDSEAKIFADKLQERLTNRTNAVGQQRRELQEQDDAHQKEIFELRSSLNLARQSVSSIRQELTAMNRRRNEMAGQIDGMTTTEARVEETVVAYSREEKRLSEVREASNLSHLDAEIKKCESIAKEAGERCSELSEELKRMNLQADLRSRQSRRREEKSSKEEQRRNLLESRRLQIDAVFDGRVPPTDVLAATLRSTIRDKQRALAGQEKKVQMSRGAVDSGRTEKRMTEEALARVEADVRSLQTQIAAVCGSKTYEAALEEVARAREEAQKSFHLSESADVMYTNFISRAQSSHACPLCTRKFEETTNMLQTFVNDLNSLLLSIPALKVERKAALESEEKRYRDLVSLESVRARVVKLETEAADLRRKIAIQTSALQTAVSELEEAGLLSATQQAELEAAQKLITDVDSIDKLGGEIARLGQEIDSEESRIIGGGSTRTVNDVSSEFETNQQKADASRARADKLRKDSQIRLTEIAVIETELSHLRETRARQLAEMERRRQLVREKDELTERIQSKEKEARELEGSLEPKSAKLSTTEKARDTLREKLKLFEAESKGEIDKLSGDGRSLREFTRQIDDYNMKGNDRDLTAISAHIAAAEQRKTQLQTEREKLDAEVRETERLLSRQRDTRRGMELNIEVRRKEKDVAAAQATAQQIRTQLAEMDGDELLRQHDQLASRLVDLRNERAKKQGAVEQMKSQIRSLEVELGGTMFRNVDTEHKRSMIKLKTTQLASKDLEKYYNALDKAVMRFHALKMEEINKIIQELWARTYRNADIDTIKICSDIDDEEKETDRKAYKYRVVMERGGVSIDMRGRCSAGQRVLASLIIRLALSETFCINCGILALDEPTTNLDHENIQSLANALADIIKVRRQQSNFQLVVITHDEEFVTSLGLTVAADQYYRVTKNQGQFSTIQRQNFHDSNLNNYRAGQ* # PASA_UPDATE: g1737.t1, single gene model update, valid-1, status:[pasa:asmbl_1804,status:12], valid-1 NODE_1502_length_10885_cov_42.6972 . gene 1879 2923 . + . ID=g1737;Name=g1737.t1 NODE_1502_length_10885_cov_42.6972 . mRNA 1879 2923 . + . ID=g1737.t1;Parent=g1737;Name=g1737.t1 NODE_1502_length_10885_cov_42.6972 . five_prime_UTR 1879 1916 . + . ID=g1737.t1.utr5p1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . exon 1879 1934 . + . ID=g1737.t1.exon1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . CDS 1917 1934 . + 0 ID=cds.g1737.t1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . exon 2025 2105 . + . ID=g1737.t1.exon2;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . CDS 2025 2105 . + 0 ID=cds.g1737.t1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . exon 2249 2288 . + . ID=g1737.t1.exon3;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . CDS 2249 2288 . + 0 ID=cds.g1737.t1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . exon 2735 2923 . + . ID=g1737.t1.exon4;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . CDS 2735 2811 . + 2 ID=cds.g1737.t1;Parent=g1737.t1 NODE_1502_length_10885_cov_42.6972 . three_prime_UTR 2812 2923 . + . ID=g1737.t1.utr3p1;Parent=g1737.t1 #PROT g1737.t1 g1737 MAASFSIKDEIAMLQSVRGSLEGLRVLLQAMSKDMQVMSDNCEHLTAINANWRTIMDRPKEEDKRVPRTAR* # ORIGINAL: g1736.t1 original gene structure, not modified by PASA NODE_1502_length_10885_cov_42.6972 AUGUSTUS gene 76 1217 . - . ID=g1736;Name=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS mRNA 76 1217 . - . ID=g1736.t1;Parent=g1736;Name=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 979 1217 . - . ID=g1736.t1.exon1;Parent=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 979 1217 . - 0 ID=cds.g1736.t1;Parent=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 648 756 . - . ID=g1736.t1.exon2;Parent=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 648 756 . - 1 ID=cds.g1736.t1;Parent=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS exon 76 384 . - . ID=g1736.t1.exon3;Parent=g1736.t1 NODE_1502_length_10885_cov_42.6972 AUGUSTUS CDS 76 384 . - 0 ID=cds.g1736.t1;Parent=g1736.t1 #PROT g1736.t1 g1736 MSASVPCVDAANTTTVEVTVVWFDWTPCQALKSLVSTLSTELLNGTGVYTVDCVPFGNWYSAIFDGFKAGAGYDIVIIDSQWIGEAVAPLTGTGHLLELTDLLNEAAMDKDDFYPDALKYYSEYPPNSGRYFGVPFQGDVQMLIYRKDIFQKYGIELPRTLDEMLNIAQLIVKKKYLQYGLSTFWCGLTKDGCVDETATIWNQFAWMYGGELWDTSTYK # ORIGINAL: g8067.t1 original gene structure, not modified by PASA NODE_2185_length_7371_cov_40.3056 AUGUSTUS gene 6289 7005 . + . ID=g8067;Name=g8067.t1 NODE_2185_length_7371_cov_40.3056 AUGUSTUS mRNA 6289 7005 . + . ID=g8067.t1;Parent=g8067;Name=g8067.t1 NODE_2185_length_7371_cov_40.3056 AUGUSTUS exon 6289 7005 . + . ID=g8067.t1.exon1;Parent=g8067.t1 NODE_2185_length_7371_cov_40.3056 AUGUSTUS CDS 6289 7005 . + 0 ID=cds.g8067.t1;Parent=g8067.t1 #PROT g8067.t1 g8067 MCDGRPYCAANGVCIPDSTSTPQPLLTCPIGYKKSGVGSCVPCNCKGLYCSEENGKCADVPKVVPATVERTTALSSIRLTVVTYRSECIYAYGCVTDLKNKVISAVATAVSNHDALGTNGARNVNEAPADDTKHTRNGDHGFRDVRATGPRVYMPAQVAAEISSYDARIVTLSAYVYMQYTYPGDNRVYTMSRDELRSAVRRDPFFSSNLGVANQEYLIISDGYADTVIALYAIDRPT* # PASA_UPDATE: g8066.t1, single gene model update, valid-1, status:[pasa:asmbl_3709,status:12], valid-1 # ORIGINAL: g8066.t2 original gene structure, not modified by PASA NODE_2185_length_7371_cov_40.3056 . gene 25 4266 . - . ID=g8066;Name=g8066.t1 NODE_2185_length_7371_cov_40.3056 . mRNA 25 4266 . - . ID=g8066.t1;Parent=g8066;Name=g8066.t1 NODE_2185_length_7371_cov_40.3056 . five_prime_UTR 4234 4266 . - . ID=g8066.t1.utr5p1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 4216 4266 . - . ID=g8066.t1.exon1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 4216 4233 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 3693 3920 . - . ID=g8066.t1.exon2;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 3693 3920 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 3261 3381 . - . ID=g8066.t1.exon3;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 3261 3381 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 2909 2955 . - . ID=g8066.t1.exon4;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 2909 2955 . - 2 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 2612 2713 . - . ID=g8066.t1.exon5;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 2612 2713 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 2308 2358 . - . ID=g8066.t1.exon6;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 2308 2358 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 1892 1991 . - . ID=g8066.t1.exon7;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 1892 1991 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 1674 1736 . - . ID=g8066.t1.exon8;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 1674 1736 . - 2 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 1063 1173 . - . ID=g8066.t1.exon9;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 1063 1173 . - 2 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 692 783 . - . ID=g8066.t1.exon10;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 692 783 . - 2 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 459 488 . - . ID=g8066.t1.exon11;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 459 488 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 25 180 . - . ID=g8066.t1.exon12;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . CDS 145 180 . - 0 ID=cds.g8066.t1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . three_prime_UTR 25 144 . - . ID=g8066.t1.utr3p1;Parent=g8066.t1 NODE_2185_length_7371_cov_40.3056 . mRNA 145 4233 . - . ID=g8066.t2;Parent=g8066;Name=g8066.t1 NODE_2185_length_7371_cov_40.3056 . exon 4216 4233 . - . ID=g8066.t2.exon1;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 4216 4233 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 3693 3920 . - . ID=g8066.t2.exon2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 3693 3920 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 3261 3381 . - . ID=g8066.t2.exon3;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 3261 3381 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 2909 2955 . - . ID=g8066.t2.exon4;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 2909 2955 . - 2 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 2612 2713 . - . ID=g8066.t2.exon5;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 2612 2713 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 2308 2358 . - . ID=g8066.t2.exon6;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 2308 2358 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 1892 1991 . - . ID=g8066.t2.exon7;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 1892 1991 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 1674 1736 . - . ID=g8066.t2.exon8;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 1674 1736 . - 2 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 1054 1173 . - . ID=g8066.t2.exon9;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 1054 1173 . - 2 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 692 783 . - . ID=g8066.t2.exon10;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 692 783 . - 2 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 459 488 . - . ID=g8066.t2.exon11;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 459 488 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . exon 145 180 . - . ID=g8066.t2.exon12;Parent=g8066.t2 NODE_2185_length_7371_cov_40.3056 . CDS 145 180 . - 0 ID=cds.g8066.t2;Parent=g8066.t2 #PROT g8066.t1 g8066 MSNYGQRPPGPGQYQQTPYGAQQAYGQQPPAQSGPYGGYQGQPGQPAGQQPPAQSGPYGGYQGQPGQPAGQQPPPQQGQANPYAGYSAQWGAQPAGGANQYQQQQPPQQGYAGQQQYGAAQYGQQAQQYGGYGQQPPQGAQGARPPGAFGQPPQNMYGPPPGADPAMWNFFQAVDQDRSGQINAQELQQALAAGNQANFKSETCQLMIRLFDVDRSNTINFQEFVGLMGYIQQWRACFERFDADRSGSIDPKEFATALQSFSYRLSPPIVEALVKRFGAPGTNVIRFDEFIVACVQLQRMTDSFRKYDTSKTGSIQLQYEQFIGLLLEASFV* #PROT g8066.t2 g8066 MSNYGQRPPGPGQYQQTPYGAQQAYGQQPPAQSGPYGGYQGQPGQPAGQQPPAQSGPYGGYQGQPGQPAGQQPPPQQGQANPYAGYSAQWGAQPAGGANQYQQQQPPQQGYAGQQQYGAAQYGQQAQQYGGYGQQPPQGAQGARPPGAFGQPPQNMYGPPPGADPAMWNFFQAVDQDRSGQINAQELQQALAAGNQANFKSETCQLMIRLFDVDRSNTINFQEFVGLMGYIQQWRACFERFDADRSGSIDPKEFATALQSFSYRLSPPIVEALVKRFGAPGTGGTNVIRFDEFIVACVQLQRMTDSFRKYDTSKTGSIQLQYEQFIGLLLEASFV* # ORIGINAL: g6393.t1 original gene structure, not modified by PASA NODE_4305_length_1846_cov_29.4918 AUGUSTUS gene 358 1575 . + . ID=g6393;Name=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS mRNA 358 1575 . + . ID=g6393.t1;Parent=g6393;Name=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS exon 358 561 . + . ID=g6393.t1.exon1;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS CDS 358 561 . + 0 ID=cds.g6393.t1;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS exon 901 1085 . + . ID=g6393.t1.exon2;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS CDS 901 1085 . + 0 ID=cds.g6393.t1;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS exon 1267 1321 . + . ID=g6393.t1.exon3;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS CDS 1267 1321 . + 1 ID=cds.g6393.t1;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS exon 1573 1575 . + . ID=g6393.t1.exon4;Parent=g6393.t1 NODE_4305_length_1846_cov_29.4918 AUGUSTUS CDS 1573 1575 . + 0 ID=cds.g6393.t1;Parent=g6393.t1 #PROT g6393.t1 g6393 ISDVPVRPHDVVMETLIMYVDDLFPSPYRQAVKRGPLLMRTPDNAWQLVFCIIDDDKLHILTDEHTEEEVVTIDLDVDAKATVRGVDDSLFVMENCFLIESQRSRYHEALFVDDKRLKKYYFASDTDKERHYWIEAIRTCIESGRRNQ* # PASA_UPDATE: g12764.t1, single gene model update, valid-1, status:[pasa:asmbl_2678,status:12], valid-1 NODE_1809_length_9135_cov_38.1622 . gene 77 354 . + . ID=g12764;Name=g12764.t1 NODE_1809_length_9135_cov_38.1622 . mRNA 77 354 . + . ID=g12764.t1;Parent=g12764;Name=g12764.t1 NODE_1809_length_9135_cov_38.1622 . five_prime_UTR 77 78 . + . ID=g12764.t1.utr5p1;Parent=g12764.t1 NODE_1809_length_9135_cov_38.1622 . exon 77 354 . + . ID=g12764.t1.exon1;Parent=g12764.t1 NODE_1809_length_9135_cov_38.1622 . CDS 79 180 . + 0 ID=cds.g12764.t1;Parent=g12764.t1;5_prime_partial=true NODE_1809_length_9135_cov_38.1622 . three_prime_UTR 181 354 . + . ID=g12764.t1.utr3p1;Parent=g12764.t1 #PROT g12764.t1 g12764 EDCERNDGSAEKPYHMSKSLMKILKYKNKSTSE* # ORIGINAL: g12766.t1 original gene structure, not modified by PASA NODE_1809_length_9135_cov_38.1622 AUGUSTUS gene 3718 8874 . - . ID=g12766;Name=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS mRNA 3718 8874 . - . ID=g12766.t1;Parent=g12766;Name=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 8858 8874 . - . ID=g12766.t1.exon1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 8858 8874 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 8295 8563 . - . ID=g12766.t1.exon2;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 8295 8563 . - 1 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 7846 8072 . - . ID=g12766.t1.exon3;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 7846 8072 . - 2 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 7363 7542 . - . ID=g12766.t1.exon4;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 7363 7542 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 6873 7042 . - . ID=g12766.t1.exon5;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 6873 7042 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 6147 6537 . - . ID=g12766.t1.exon6;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 6147 6537 . - 1 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 5897 6051 . - . ID=g12766.t1.exon7;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 5897 6051 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 5264 5369 . - . ID=g12766.t1.exon8;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 5264 5369 . - 1 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 4986 5098 . - . ID=g12766.t1.exon9;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 4986 5098 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 4580 4712 . - . ID=g12766.t1.exon10;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 4580 4712 . - 1 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 4043 4147 . - . ID=g12766.t1.exon11;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 4043 4147 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS exon 3718 3912 . - . ID=g12766.t1.exon12;Parent=g12766.t1 NODE_1809_length_9135_cov_38.1622 AUGUSTUS CDS 3718 3912 . - 0 ID=cds.g12766.t1;Parent=g12766.t1 #PROT g12766.t1 g12766 MGDVDGSVREQATICLAQLSIHLQPNISAHHAAIVPRLFVGLQDSSVLVREKTAVALEVFCQNLEGDIAQYMAPLMDALLSWLRASDKRVAGMAFGCMGATARAAGVRFAPYFEESIRHVLAGMSLESDDDVMVRIEATDTAGALAEAVGYDLFAPYVPLCMENGLQALSTTEDYELRHCIYGMFASISLCLRGQFAAYLDRVMPFILASCVSQQGIERHRRDDVDVPGADIDVSDGEGEDDDLAGVTVQEAFLDEKEVALNVLGALAERVGAAFMPYMERTLVQLIGLLGHFYPDVRKAAAQALGQCIIAIHTAFPPPAPWTPGFLHAATNAPLSGETANAVTAIVPTLLAAMDRDKDRLVVLAIVETMLVLIDRVGPSLLADGRAAKLVDVVDDILRKAAVCQREACVDDDNEDEEGGDGSDEEAGDEEAEQDALLIENTADVVAALAKVGGVEFAPQFLTLWPVLKKYSRKSASESERSMFTGVIAEVMGSIGTEGVVAYLSEVLPVLLRLTKDKEDEVRSNAAFALGVICAHGGATVVPHFVSILQALQPLFFNQSMLNVTDNACGAVCRMIDAKADALPIDQVLAVVVQYLPLKVDFQENITVLGCLSRLLQRAHPAVAPHLPRILSIFAHVLSNPAECSQEVRALIASTVTGLVASYGSQMAAVLSSLPEQERNVFASFL* # PASA_UPDATE: g12765.t1, single gene model update, valid-1, status:[pasa:asmbl_2677,status:12],[pasa:asmbl_2679,status:12], valid-1 NODE_1809_length_9135_cov_38.1622 . gene 654 2997 . - . ID=g12765;Name=g12765.t1 NODE_1809_length_9135_cov_38.1622 . mRNA 654 2997 . - . ID=g12765.t1;Parent=g12765;Name=g12765.t1 NODE_1809_length_9135_cov_38.1622 . five_prime_UTR 2966 2997 . - . ID=g12765.t1.utr5p1;Parent=g12765.t1 NODE_1809_length_9135_cov_38.1622 . exon 2113 2997 . - . ID=g12765.t1.exon1;Parent=g12765.t1 NODE_1809_length_9135_cov_38.1622 . CDS 2113 2965 . - 0 ID=cds.g12765.t1;Parent=g12765.t1 NODE_1809_length_9135_cov_38.1622 . exon 654 1744 . - . ID=g12765.t1.exon2;Parent=g12765.t1 NODE_1809_length_9135_cov_38.1622 . CDS 942 1744 . - 2 ID=cds.g12765.t1;Parent=g12765.t1 NODE_1809_length_9135_cov_38.1622 . three_prime_UTR 654 941 . - . ID=g12765.t1.utr3p1;Parent=g12765.t1 #PROT g12765.t1 g12765 MMGRKESKRSLRSPSPSSSNSLSAGSEDKREKNGSSRDSRDISHHKREKKRRRDRDKTKKKKKEKSSARERDYGERHAPRVRYEDDSDEEECVGDYDEDAKDRLCLRVVHAARRGSIRKLIRRIDALIRNRIELNRCVDPDDGRSPLHIACHFGDSDAVRLLLHKGMSPAWCDDNGDTPMHVAVLRARFGIISIFAKSADADAWHVRNKDGLSAFVLLEALLRQLSIRGVDAGADNDDGVTVERICALDDAISTIRDREEKRWREQLFGELGEDDWEKRTYERADWTQEDEERAEHTFHKPGEWMEHVAQAHYRKLRESRAANIRTQHARHTQIGSLDADAEDTGHAGRDGREGHEGRESSARGGGGAAGHASGTDPLSLLRREAALRHLRELYLQRWADFALSLPALLASSPSSIASSAAAVGGGDVGRATTGIACSHVPWPPVEELVALSVGVRANSTAKAADFWSDVGRAVTTTVTSAPGGQGASTPSDANSEGDLRAWLRVEQRRWHPDKFDVRIAAHAASPEERDRMSAAAKRVAQLVNEAWSRLE* # ORIGINAL: g3036.t1 original gene structure, not modified by PASA NODE_6183_length_622_cov_75.6984_potentialcontaminant AUGUSTUS gene 44 622 . + . ID=g3036;Name=g3036.t1 NODE_6183_length_622_cov_75.6984_potentialcontaminant AUGUSTUS mRNA 44 622 . + . ID=g3036.t1;Parent=g3036;Name=g3036.t1 NODE_6183_length_622_cov_75.6984_potentialcontaminant AUGUSTUS exon 44 622 . + . ID=g3036.t1.exon1;Parent=g3036.t1 NODE_6183_length_622_cov_75.6984_potentialcontaminant AUGUSTUS CDS 44 622 . + 1 ID=cds.g3036.t1;Parent=g3036.t1 #PROT g3036.t1 g3036 RASAVAQNGDGGVALSQNVEDGLLGDSLNCREGAWFVEEDMADASRAPLSTAVVESETTLPPAGEEADQTQSANDVFDPFEGTDYYGDQEGPSDNVLSAFASSLLGNGAFDRIENDDGEVLTQLSDVILAHGTPSEALPNDTICEDDDVVESLVARFCGDAIDASPRDSPVVVPSGYDVVVADDAIMHATES # ORIGINAL: g593.t1 original gene structure, not modified by PASA NODE_1722_length_9517_cov_41.6388 AUGUSTUS gene 8394 9517 . - . ID=g593;Name=g593.t1 NODE_1722_length_9517_cov_41.6388 AUGUSTUS mRNA 8394 9517 . - . ID=g593.t1;Parent=g593;Name=g593.t1 NODE_1722_length_9517_cov_41.6388 AUGUSTUS exon 8394 9517 . - . ID=g593.t1.exon1;Parent=g593.t1 NODE_1722_length_9517_cov_41.6388 AUGUSTUS CDS 8394 9517 . - 2 ID=cds.g593.t1;Parent=g593.t1 #PROT g593.t1 g593 GVSAPSASASGATATGPVAGVSAGAGGAPTSTLSFNAPSAAGLGGASGFLFGLDSSQPRTSLSAGMFGFAPSPIGSKSGPSPSIGVDSSPPADGQLVGSERAESAATQPAIEVSGTVSFKACAALLTRSASRWRARGNAVVSVCAADVDGRLNHSFNLFAECLNASMQHEVTVTGFRQLYHLQHRPSVWAWRACDTPRLSHAFDMVTDTTSLIALRFESDALASAFGAAIDAASLVEAPNGDSEEELSLSPDALDDTVLDASSGLGMRLVPSPSRRNIVGLRDPLESARDLYNLADIAVAHHAAEDVVQRSPKPVRRVAPTPTPTLTPTPTTPSASFGIARQDMVGPPAFAACIGTRAQFEEMAEELLRSTKN* # PASA_UPDATE: g590.t1, single gene model update, valid-1, status:[pasa:asmbl_2445,status:12], valid-1 NODE_1722_length_9517_cov_41.6388 . gene 1057 3799 . + . ID=g590;Name=g590.t1 NODE_1722_length_9517_cov_41.6388 . mRNA 1057 3799 . + . ID=g590.t1;Parent=g590;Name=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 1057 1259 . + . ID=g590.t1.exon1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 1057 1259 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 1363 1520 . + . ID=g590.t1.exon2;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 1363 1520 . + 1 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 1789 1838 . + . ID=g590.t1.exon3;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 1789 1838 . + 2 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 1951 2068 . + . ID=g590.t1.exon4;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 1951 2068 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 2158 2288 . + . ID=g590.t1.exon5;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 2158 2288 . + 2 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 2700 2852 . + . ID=g590.t1.exon6;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 2700 2852 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 2994 3125 . + . ID=g590.t1.exon7;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 2994 3125 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 3249 3386 . + . ID=g590.t1.exon8;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 3249 3386 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . exon 3513 3799 . + . ID=g590.t1.exon9;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . CDS 3513 3632 . + 0 ID=cds.g590.t1;Parent=g590.t1 NODE_1722_length_9517_cov_41.6388 . three_prime_UTR 3633 3799 . + . ID=g590.t1.utr3p1;Parent=g590.t1 #PROT g590.t1 g590 MASIARKVRVSLKTAGSQSSVEEEDPAAEAERLRKQKEYEDAKDRMKQRLKDGPGLIGDRMETKTNTTQADADVLGFRFGDTYNGDDHRKFMQSYNGILTRRAMRWDKLMPRSNWGARSRAFKRFCRKGVPASLRRDVWMFVTGAQADMDAHKGEFQRLLADGRKSEAPFAEAIEKDLHRTFPENVQFQCDIEHGHIVRESMKVRQLRNVLLAFGQRNPKIGYCQGMNFVTGMFLLVLDDEEAAFWLLVATIERVLPDYYSESMHGMRVDQEVLSELVRAKLPAFASHMEKSGFGLSLITTKWFVCLYIDTVPTESVLRIWDSLFCEGQKVLFRIALAIFKARETELVAIRDATVLYNTVKDLPHTLLDCHALMHTAFASIGSLSMKTIASLRRQSEAKM* # PASA_UPDATE: g592.t1, single gene model update, valid-1, status:[pasa:asmbl_2448,status:3], valid-1 NODE_1722_length_9517_cov_41.6388 . gene 6839 8391 . + . ID=g592;Name=g592.t1 NODE_1722_length_9517_cov_41.6388 . mRNA 6839 8391 . + . ID=g592.t1;Parent=g592;Name=g592.t1 NODE_1722_length_9517_cov_41.6388 . five_prime_UTR 6839 6964 . + . ID=g592.t1.utr5p1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . exon 6839 7058 . + . ID=g592.t1.exon1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . CDS 6965 7058 . + 0 ID=cds.g592.t1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . exon 7165 7301 . + . ID=g592.t1.exon2;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . CDS 7165 7301 . + 2 ID=cds.g592.t1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . exon 7447 7970 . + . ID=g592.t1.exon3;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . CDS 7447 7970 . + 0 ID=cds.g592.t1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . exon 8101 8391 . + . ID=g592.t1.exon4;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . CDS 8101 8272 . + 1 ID=cds.g592.t1;Parent=g592.t1 NODE_1722_length_9517_cov_41.6388 . three_prime_UTR 8273 8391 . + . ID=g592.t1.utr3p1;Parent=g592.t1 #PROT g592.t1 g592 MSVKLLERAVPPVVYAVVASGTLALLFSLDTGLRRAYDGGDAGYLGCFFGLLAGAVFFYVLSHFAPGYVTESDCGNELAGAGDDQTFELVPTVAAAANTAAVGERSEAMLAIDAVAVDVGNTANECDADGEGQQASADTLCTKCDIARPLRAKHCKHCGRCVRRFDHHCPWLGTCVGEGNHRSFFVFVASHTVLTAWTAGILTSPTIASFGRAPAGVSVLLCATTGTMVLALIIFGGLTISHAYLIGTNQTTYEHMRRGKIPYLRDLNEDENPFDRGVILNCWAFFIRGVWRQHKQSAGYEIIGMRNT* # PASA_UPDATE: g591.t1, single gene model update, valid-1, status:[pasa:asmbl_2446,status:12], valid-1 NODE_1722_length_9517_cov_41.6388 . gene 3938 5641 . - . ID=g591;Name=g591.t1 NODE_1722_length_9517_cov_41.6388 . mRNA 3938 5641 . - . ID=g591.t1;Parent=g591;Name=g591.t1 NODE_1722_length_9517_cov_41.6388 . five_prime_UTR 5534 5641 . - . ID=g591.t1.utr5p1;Parent=g591.t1 NODE_1722_length_9517_cov_41.6388 . exon 3938 5641 . - . ID=g591.t1.exon1;Parent=g591.t1 NODE_1722_length_9517_cov_41.6388 . CDS 3938 5533 . - 0 ID=cds.g591.t1;Parent=g591.t1 #PROT g591.t1 g591 MTFPVASPLTLSAEMVTAPLSTMDVSMEKHKKCPTVESAGLLRTPLFPLCHYLRPEDDTELVTVDGMHISLCRLARNRDVVVVTARPGCPHSVSLLASLGDVGLARASAVTSASAELNRHLLTEDATVIIVVIGDESGARRLSNESNLCGRVHFVADALSSVPEALGLHSNQHPSITVVHGDLRTTPVHRSPSVASMRGDNALLSCLVVARARAEVCAIQALRVASTRPVAVEVAHCAMRGPLPLEILAAIFDQLDMRSKVRAGHVCREWRQASRIALRRDVRAHTVAIRRALPGANGQCVPVTPRPGCSVTAGVAVPSFKARWAPQGVAMSPAFRRSADSTESHTVLLYPPATRFACRPIRELRACISSLLALLRCTGAIAAIFDDTRRMHSEGTALAVVGDAQGALSMYSMATACLATLDTLYGEGYTVDAYALVAMELRAALLESSAEAHINIGHASNVAEAVRLCTQCLMINAANKRALFLRGVACAMLGDAPQSAANICAAACSAAALAGCLVVAPSRKTPGTGAQ* # PASA_UPDATE: g3865.t1, single gene model update, valid-1, status:[pasa:asmbl_3798,status:3], valid-1 NODE_221_length_30900_cov_52.4943 . gene 2373 4162 . + . ID=g3865;Name=g3865.t1 NODE_221_length_30900_cov_52.4943 . mRNA 2373 4162 . + . ID=g3865.t1;Parent=g3865;Name=g3865.t1 NODE_221_length_30900_cov_52.4943 . five_prime_UTR 2373 2523 . + . ID=g3865.t1.utr5p1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . exon 2373 2689 . + . ID=g3865.t1.exon1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . CDS 2524 2689 . + 0 ID=cds.g3865.t1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . exon 2893 3108 . + . ID=g3865.t1.exon2;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . CDS 2893 3108 . + 2 ID=cds.g3865.t1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . exon 3545 3726 . + . ID=g3865.t1.exon3;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . CDS 3545 3726 . + 2 ID=cds.g3865.t1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . exon 3957 4162 . + . ID=g3865.t1.exon4;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . CDS 3957 4064 . + 0 ID=cds.g3865.t1;Parent=g3865.t1 NODE_221_length_30900_cov_52.4943 . three_prime_UTR 4065 4162 . + . ID=g3865.t1.utr3p1;Parent=g3865.t1 #PROT g3865.t1 g3865 MVDSEGRTLQFKVVLVGDSNSGKTALVKRLCNDEFSKHSKPTVGLDFYVKRLTLPGDVSVSLEVWDVGGTAIGSKMITNYIFGAQAVCLVYDVTNFHSFQNLETWLAAVKRAFAGSQLPLITLIGTKVDQIHLRTVKGEKHKEFATEHELTGFTVSSRSGDQVEASFVRIAADLAGITISKPDLEVAAKIVKVEVEGDPTVKTSNSIAQKERKHNYSVSCSVM* # PASA_UPDATE: g3871.t1, single gene model update, valid-1, status:[pasa:asmbl_3800,status:12], valid-1 NODE_221_length_30900_cov_52.4943 . gene 28716 30816 . + . ID=g3871;Name=g3871.t1 NODE_221_length_30900_cov_52.4943 . mRNA 28716 30816 . + . ID=g3871.t1;Parent=g3871;Name=g3871.t1 NODE_221_length_30900_cov_52.4943 . exon 28716 28937 . + . ID=g3871.t1.exon1;Parent=g3871.t1 NODE_221_length_30900_cov_52.4943 . CDS 28716 28937 . + 0 ID=cds.g3871.t1;Parent=g3871.t1 NODE_221_length_30900_cov_52.4943 . exon 29184 29465 . + . ID=g3871.t1.exon2;Parent=g3871.t1 NODE_221_length_30900_cov_52.4943 . CDS 29184 29465 . + 0 ID=cds.g3871.t1;Parent=g3871.t1 NODE_221_length_30900_cov_52.4943 . exon 29746 30816 . + . ID=g3871.t1.exon3;Parent=g3871.t1 NODE_221_length_30900_cov_52.4943 . CDS 29746 30816 . + 0 ID=cds.g3871.t1;Parent=g3871.t1;3_prime_partial=true #PROT g3871.t1 g3871 MYGHINQTFLFFVESAYGADKLSIVLSQLPANEPRHFEQLVDYPDETTYELLAWTAEATGETRDEILEKFGEFFVVGTSFAEFLTNMNGAHRRMLSIMPHMRPPVLWCTDLEQNSLVLKYVPGRKSRTNLQYLVVGILKGAGRRFGLEVSATLDDPSAKAEGMPDTFKVSWAPVVAPALETTTSHPDGNTHASDNATATSRALPIGSADPATKSKSPCERTDADSPDAGSMFRVDGVNGHMTQEGAVNPTACPMSGRANHSQRTSDESQKSAPESSAGSSVRFYSGNTPPSARAGCPGRTPADTAVALSGTSTPATASPHVTSRCTSEDNGGGVGMPFDCMQQAFPFHIVLDEHMHVVQLGDALTRALGGKKNGLRFDELFVVSRPRPPLDMHGRSVIDVAWFATVVQQTAFVIECIHPSASDLKLRGSVVVHAPNAPATSPLDIITHALGVGSGYKGARVFVLGQLMLPRSIEGAIKMLESVKSTPMHTAEHDHLYLTQFSNLLADDADTLATMILRLKAEIRT # ORIGINAL: g3864.t1 original gene structure, not modified by PASA NODE_221_length_30900_cov_52.4943 AUGUSTUS gene 2 1686 . + . ID=g3864;Name=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS mRNA 2 1686 . + . ID=g3864.t1;Parent=g3864;Name=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 2 252 . + . ID=g3864.t1.exon1;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 2 252 . + 1 ID=cds.g3864.t1;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 449 834 . + . ID=g3864.t1.exon2;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 449 834 . + 2 ID=cds.g3864.t1;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 1055 1228 . + . ID=g3864.t1.exon3;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 1055 1228 . + 0 ID=cds.g3864.t1;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 1495 1686 . + . ID=g3864.t1.exon4;Parent=g3864.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 1495 1686 . + 0 ID=cds.g3864.t1;Parent=g3864.t1 #PROT g3864.t1 g3864 NYNYNYNYNYNYNNYNYNNNTTTTDSPLILERKPAVGGANRPIACASGASSRSTASNGGLMDQLANLVRKLEAEPAAIAAYKKVHGNNSEVISALEKLVASKENGLAFGAKREGPKEGTKHAMNERKAFGDITNVTKNGGNQQQKAGLKGTETSKKRKVDHGHEDQDEDDASDDGCMEGGGMSDSDYAPSPVAVKAPPKPRAKRQKKDEAEQPLGIQIHVDPQQRSNVEAELLSILNSCDVQRLKLLNGIGEKRAISIAEYVKAGTPLAQLSDMTNIPGFGDKFMNSFLKVFFAYTYDVNFQSVVNDGKNIAPALRRRLPLSLCFISLTNIIF* # ORIGINAL: g3867.t1 original gene structure, not modified by PASA NODE_221_length_30900_cov_52.4943 AUGUSTUS gene 11554 12375 . - . ID=g3867;Name=g3867.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS mRNA 11554 12375 . - . ID=g3867.t1;Parent=g3867;Name=g3867.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 11554 12375 . - . ID=g3867.t1.exon1;Parent=g3867.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 11554 12375 . - 0 ID=cds.g3867.t1;Parent=g3867.t1 #PROT g3867.t1 g3867 MPLRVVLVAAVAFVVVACILPTPTLAARQAAAHTAAADDEADATPSQKSGERYKIEGTLVFDGKAFAYSVPDEAQVQGHQPVVSLDGGAGIPQPKAGWQSDVRVILNNGERVAYVRDDGSFVFEDILPGGYILQVQSPLYIFPALRVDVGAKTGRVKVRLAALVLGGAVPGVTLPYPIQLRPRGMPMYFQPRDGFKIRDVLMSPMGLMVGMTVLMMVVFPKLIGSLSPDELREMQQSNPLNMASQSQGLDIAGMLARATAPPPQAPQIAARRQ* # ORIGINAL: g3869.t1 original gene structure, not modified by PASA NODE_221_length_30900_cov_52.4943 AUGUSTUS gene 19113 25255 . + . ID=g3869;Name=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS mRNA 19113 25255 . + . ID=g3869.t1;Parent=g3869;Name=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 19113 19301 . + . ID=g3869.t1.exon1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 19113 19301 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 19634 19990 . + . ID=g3869.t1.exon2;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 19634 19990 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 20357 20676 . + . ID=g3869.t1.exon3;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 20357 20676 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 20951 21515 . + . ID=g3869.t1.exon4;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 20951 21515 . + 1 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 21856 22023 . + . ID=g3869.t1.exon5;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 21856 22023 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 22261 22357 . + . ID=g3869.t1.exon6;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 22261 22357 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 22643 25077 . + . ID=g3869.t1.exon7;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 22643 25077 . + 2 ID=cds.g3869.t1;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 25211 25255 . + . ID=g3869.t1.exon8;Parent=g3869.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 25211 25255 . + 0 ID=cds.g3869.t1;Parent=g3869.t1 #PROT g3869.t1 g3869 MGASESKLDCRLGECIERQGGGEHPWGLHSAVLYGRDEVSVFSHKALESPPPVLRAAVTHNVNKLKVVRHPCIVKFLATYEENGTLYVVTEPVVPLAVIISRLSIEEISVGLFKIIKALTFLHSECGLSHNDLGVHSIFVSESDGGWRLGALGFANSVEATTDDYLASTRSYRQKASVTPEESSGKGARGRASVHSRDAFAFAALVAEVMETSKAMANSHAMSAQTAADAAEFLAVVMRDYAHAQPAQRPPLDGLLEMGFFTRSTLLDILRFLGNITINSSAEKLEFFSTLAQRLRTLRTPIVIDALLPHLMSHRVLLEPHVSEFLPSLLTPMPESEGSGSVSGGGPWGPQRQLHAKIVANAKRAKAPKRADDADDWNDDEDDEEQQEDEGDEAAWDESTSASASASVLASASSPGAFSSSCRPVLPLKEYRQSLVPAVMKLFVLRDFNVRMIMLEQVPLFVPHMDLKTITDTFLPMLVDGITDLRDEMVIATLRALIVVTPCLKSKPLVREIGTRKTVFRELLPGGRRPQTDRRSSTAPLVADSRGSSQSSLKNNWRDEDDEDEEGSHKGGGRKGRSPPLSRRNDSRDDSDGEYDAAPASKADEEKARAERERRRIEMQQKRLERERKLLEKRQNRPHGALGATPTHTASSTTVAGGTPSELSHTSGSTHTPSEGRRLESSGGSDRGGARHSGNNGDGWGDDESAEDGGNDGDGWREPKRSPAASRPSSEHPPVVAREREDAGGDDSDYGDGEVDAFASPSSAAVHLSRGSGLISPERQSSLADSNGKGASGKNNNNNSNSKKNAKNKSDSWGDDDGGDGDDADNGWGESTESQPRVSRAGSAASASASAVVSGDKAGRSSSVGSSVASGVNATGGTGASGKMKLGGSSKPAAAKTGVAATTSSPAPSSAPATPTPTATDKHIDVDNKKPPAPKAEAPPKPKSDLDFFADMEPEYAPPVLVSKEDKAAPAVIPSYLLGIASAAPTASIAPAAGSMSTQSSSLVRGVVGNASSAAPASKRSLEVAEIAEGADEGGWGDDDADPEDVALALSRTDSEPRNIVANSAHIHPSSSSARTTDDDIVSARNLASAKTASLLPADDPADGWGDDVAPIVEQLEPPHTSLSASAISTAVPNVVSSALSNAPLSDGGEVDGWGDDDDEIPDPDIVPVVTKAASAAPAPVEQRSPVVHAATQRSLSSVGSHSSSSAALTPKQSIEDKDDESFEGWGDEEIESSGSSLTNARAGASMKTSTAPAGGKSGSQHSAAAPIEAAFANGTVSSTTAHAVAPLSLAVSTKTPDTGDDWFAGVGVSSPTTKSNGSVSASSSAPLSPASGTAAASASTPAKAAESGSKGAKKPKQAKKAAGGSSAKSTPKKQVENDDGWGNDGGFEDF* # PASA_UPDATE: g3870.t1, single gene model update, valid-1, status:[pasa:asmbl_3801,status:12], valid-1 NODE_221_length_30900_cov_52.4943 . gene 25835 26931 . + . ID=g3870;Name=g3870.t1 NODE_221_length_30900_cov_52.4943 . mRNA 25835 26931 . + . ID=g3870.t1;Parent=g3870;Name=g3870.t1 NODE_221_length_30900_cov_52.4943 . exon 25835 26016 . + . ID=g3870.t1.exon1;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . CDS 25835 26016 . + 0 ID=cds.g3870.t1;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . exon 26161 26201 . + . ID=g3870.t1.exon2;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . CDS 26161 26201 . + 1 ID=cds.g3870.t1;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . exon 26406 26551 . + . ID=g3870.t1.exon3;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . CDS 26406 26551 . + 2 ID=cds.g3870.t1;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . exon 26682 26931 . + . ID=g3870.t1.exon4;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . CDS 26682 26903 . + 0 ID=cds.g3870.t1;Parent=g3870.t1 NODE_221_length_30900_cov_52.4943 . three_prime_UTR 26904 26931 . + . ID=g3870.t1.utr3p1;Parent=g3870.t1 #PROT g3870.t1 g3870 MDAPSIMPVTYTYQNSHPIYRAPNPARMPIAGKNIVAGDALNIADIRGAAYDMQPGGSGICVAATIRFLGVWAERCRGAAAVAPQQPAVLPAAEFAAIQNAIEIRTFNLNAQDNDVLRILPVTMTTPGPLPPHLLGRHPRAARQSLANFVAAPCAKVVTFLCYNRARQFDPSLTEGRWPSRAATRVVQYLLSFIVA* # ORIGINAL: g3868.t1 original gene structure, not modified by PASA NODE_221_length_30900_cov_52.4943 AUGUSTUS gene 13157 17970 . + . ID=g3868;Name=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS mRNA 13157 17970 . + . ID=g3868.t1;Parent=g3868;Name=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 13157 15376 . + . ID=g3868.t1.exon1;Parent=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 13157 15376 . + 0 ID=cds.g3868.t1;Parent=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 15652 16416 . + . ID=g3868.t1.exon2;Parent=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 15652 16416 . + 0 ID=cds.g3868.t1;Parent=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS exon 16645 17970 . + . ID=g3868.t1.exon3;Parent=g3868.t1 NODE_221_length_30900_cov_52.4943 AUGUSTUS CDS 16645 17970 . + 0 ID=cds.g3868.t1;Parent=g3868.t1 #PROT g3868.t1 g3868 MGRKGRPQEPAPPSCCGSHSAVHRYLHVFAERNGLLGGHERDGTPFTCARLLALSFDALVDDDALVEHFNVFLASTAFAVHTEFSKCGTVRMLNTDVTGDVSATGRKSTGRRTGTSRGASRSVASGGGDGELPDHAAHTWLEQERLPFFASSECLARFVLGDLAAGDCASGDARYLRGPVGFAELSRFLAGCAGANDLAFWLDAELYHLCGSKCMRAVMLCWIRSAYLQDCAPMQLSPAARELFAASARTMDVDPGAVLAGLQSVSLENIRSYWVKRFFHGNVSAHAITTVENGNGIGIGADIAEEASSKQTRASARLQSRRQASAGSARKSTSRNTRAGAETPDVAGTMGARMGGMSSRMAARGTASAGRTPSSLSAADEDSAVAARRTKSRAVAASATITPQGVSVTKEGLVLAIKSEAKAGFPFLAFLGDADVAFGVEGTPIAAGICCLLFWREVAWFRRLPADNIGLLECVSRTIFNRYLAGGAPMPIGYGNFAHEGGLRAMEAMDFAARFDGPVAHALRMLVAPWRDYASRDFRGWAQAMSARRCESRMTGSPLQGDRRSTNRSRHGLGSGVASCPEFVEVPKKRYGTATVRAVATSADFNRRAEYLGVEPQKLNRSNSSDDDSEADAEKKPSSAVRRRRLLAALKLAERISDERGKDLEDAYEHYGEAFMYVASENAFLNGDEFRRLADGRVIGPDGEVISVDAEGRLLMSREQRVIAALHAVLRNPGEAEHFEAFARKGGFHHDLHLWYEIETLRQYAIDCEISRNQCEAIMREHLILKSPSRVFVEDDLSAAEIMASLRLDRLTANKVLGLGQATVDCAPTTSTVRRRGGLDNQPRIDVGSIPIPSFAGAGTALPPITQPAPAANADVPRLDKGIRTGAGGSGSDVGSNAGQGARGANGRYIFDNADVVWNVATIAQLQSIQYSLLLRMAKKHFPAYVATPGYRARNEEGSMNHVMADMQMHAAIADRRRGVAATSMAKADKHSKCKARWSLAIQDVVLCIRALRNPMSSEHLKHYLEWRGLFLQNDVSFYQEAMRYLRSHGKMRKLAEVRATNMMTLFFPTDAAGHETCLIDCDPWTMRQLRDTPKGFFPRALFRAARLGCINAIIPFWRDYVEDLSTRKRTRGDRPQGLKFKDPNPEDTKRMRALAEQTPAHAMLVEGAAEHHHRARKLGRRRAVSNEALLKDKLVVHFSLAAQGTHGRFQALLEADATLLQQEDASKAHSVDTAAKKKRGAAVSGPGVAGKLPGAAPLVHVGAHAPISHRRRPVVVADAAPHHAPQSAGVGNAADPHQVRQAAHGQSLGVASGAKAAPLSAQRVSRQGMSLQTVHEHEHETVHGNNSNTNNNNNNNNNNNNNHRLRFAATGVSHVPGEGMLPGIGGPRSRPQHAHAQDGGGGHGGAAGERKVRLPVVVAPSSQRGFGRIASLKAS* # PASA_UPDATE: g3866.t1, single gene model update, valid-1, status:[pasa:asmbl_3799,status:3], valid-1 NODE_221_length_30900_cov_52.4943 . gene 5146 11754 . + . ID=g3866;Name=g3866.t1 NODE_221_length_30900_cov_52.4943 . mRNA 5146 11754 . + . ID=g3866.t1;Parent=g3866;Name=g3866.t1 NODE_221_length_30900_cov_52.4943 . five_prime_UTR 5146 5251 . + . ID=g3866.t1.utr5p1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 5146 5364 . + . ID=g3866.t1.exon1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 5252 5364 . + 0 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 5513 5641 . + . ID=g3866.t1.exon2;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 5513 5641 . + 1 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 5901 6096 . + . ID=g3866.t1.exon3;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 5901 6096 . + 1 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 6300 6409 . + . ID=g3866.t1.exon4;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 6300 6409 . + 0 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 6598 6765 . + . ID=g3866.t1.exon5;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 6598 6765 . + 1 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 7001 7133 . + . ID=g3866.t1.exon6;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 7001 7133 . + 1 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 7380 7487 . + . ID=g3866.t1.exon7;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 7380 7487 . + 0 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 7740 7824 . + . ID=g3866.t1.exon8;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 7740 7824 . + 0 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 8033 8431 . + . ID=g3866.t1.exon9;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 8033 8431 . + 2 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 8638 8767 . + . ID=g3866.t1.exon10;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 8638 8767 . + 2 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 9058 10282 . + . ID=g3866.t1.exon11;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 9058 10282 . + 1 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . exon 10527 11754 . + . ID=g3866.t1.exon12;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . CDS 10527 11171 . + 0 ID=cds.g3866.t1;Parent=g3866.t1 NODE_221_length_30900_cov_52.4943 . three_prime_UTR 11172 11754 . + . ID=g3866.t1.utr3p1;Parent=g3866.t1 #PROT g3866.t1 g3866 MAPARVSRYEAVPMLVVASLLVSVHIAQSAPNEPQNAKWNVNFNTNGADPSQYYGKWEGHSYFPSSQDWRRESIYQFVTDRFADGDPSNNDGRHGGYDVTDIGKRHGGDFKGITAKLDYIKSLGFTAIWVSPVFQNRFNSYHGYAQIDFTVLDDRFGTLDDFREMVDEAHKRGIYVIVDIVVNHMDNLLSFEGHADSSAPFRMHAGEYRQSYRNASETYRDFTVDNTFYANGGYGTVYGYDGYPKTDSDGGSFWLSDFHHNGDLQDYSDAWQNHIGKIYGIMDDLRTEHTRVQAKIIAMTKALIASVDIDGIRMDTPMQVPLSFFQAWAPAVRNHAKSLGKNDFLIFGEFFCSRERAATMTGRGKTPDMWGNDNAFIGSSDQRTMHGGIAYTTYNWFNTAVKDQQNNPRGLMDTLKADLTAYDFYDPEKGERRYTQFVFFNNHDQWRMSAAGDGFNKTDLASAILLLFPGVPLFYYGDEQGFLTKGTALDGWSREDFFTSLAWKDQPTVDGKNPCEGDNFDMTNPHFLHVQRLNDIRRKYVNLQSCDDVYERWTQPGNTNGIFAFSRTCRNMDEWVLVAFNTWKDDLTMGGANGPLYTGWNANDVVANAENPAETYTIGANGVIGESVLVRGYGYKVLVRQSSVRPLSPVVVHTEPSHDEAIVTDNPQTAVHIRVRFSQPMDKVTLLRAFTVFDHTVDADNIQYDQSTYELSYLGMFSHGIVRYAISEDALTADLKYPMHGRFSARFRIGSGRRNAIINNKIGTDDQLVVRADGASGEVVVDHASWGAELMRVRDGFGAVSPWVAYRPGQQSVKLSVGYGKRTVSVQYHADHSGAYIVSGSVDIPYPHAHSLERVFVRGSFNRWSSSSGMALVGDHLWRAVVHVDAVGAAEFKFDVAMDWVTCFGDDNGDGRADAHGANIRFERADGDGLFEITFNDQTLVYTVRPAASPAPPLLFAAAAHLEATVVATGANSLHISLVFNGIPEGATVDTLLDYYKVHLPDALSAALGGSASLASRFKVVLVTFSGDVGDYIVDVHIKEAADALDPTASTLYSRIFTMYLDKNSTLWSTSPTSLLSTFRSPYPTDRGECSGSNCKAVSGTTNRNWIIGGTVGFCGAVAVGGLIFYLNKGRKKNTRHELTRPLLHE* # PASA_UPDATE: g4919.t1, single gene model update, valid-1, status:[pasa:asmbl_9103,status:12], valid-1 NODE_732_length_18393_cov_42.4539 . gene 7333 11276 . + . ID=g4919;Name=g4919.t1 NODE_732_length_18393_cov_42.4539 . mRNA 7333 11276 . + . ID=g4919.t1;Parent=g4919;Name=g4919.t1 NODE_732_length_18393_cov_42.4539 . exon 7333 10405 . + . ID=g4919.t1.exon1;Parent=g4919.t1 NODE_732_length_18393_cov_42.4539 . CDS 7333 10405 . + 0 ID=cds.g4919.t1;Parent=g4919.t1 NODE_732_length_18393_cov_42.4539 . exon 10567 11276 . + . ID=g4919.t1.exon2;Parent=g4919.t1 NODE_732_length_18393_cov_42.4539 . CDS 10567 11126 . + 2 ID=cds.g4919.t1;Parent=g4919.t1 NODE_732_length_18393_cov_42.4539 . three_prime_UTR 11127 11276 . + . ID=g4919.t1.utr3p1;Parent=g4919.t1 #PROT g4919.t1 g4919 MGREARGGGGVAISATTSVTGAGSATHTSATHGSTGSARSVRLSLSGRLSGGRGRSPQASTSLRRGYQRRALSRSLSPDKGVGAPVGPDPDAFVLFSDDVGDCLEHLFDVERWLNDGLPPPPEKVVLKYKARDLQQSLLRRLAERTFRFHHRAIEAPGMLPSDESDADKAAFIETRPLPPEPVLIAKPAAAPTQPARRKPKPPPVVMTLQQIKEMHIMQHQQALLASQAPQVQPYEAPPWVDEDRLPLESAEFTDWLDSRRKLAKELDGLGLTEEWLSNKERSALEESYLQRLRAKAKPPAPPPTKTKAKRGGRHQKTAWMKKIEAEARESAERRLSKNLRHLQTEIQQQQQQVQQALQSAIRKRSINRMRRTLSQSSVSTTGAIEFLLPTIQGLNKSTRDTFILTLRHIFISAPMLAERLYNFRPFNNYDALMEKAEKMALSSHEREFVAMLNNQAALEAEKLKQATLLEWARLGNPYTPPSDPEKAERRAIDRRLRELHEAYVAKFGFPAVGIDAGQSKAKQIYPLEIRLQHERQTEIEFGIKSTLRLSKDRLSQLLAASHAANKKQAVVTKRNPRYSKASISREFAKGSGVLSSSSRTSLVALSSVASVTSPMPSMILDTIESRDGRASPFSTVEEEKPRAPPADKRSPSPGATRPDPGATPPVVAGGAGVGVGGGPAVGPQMALEAPPGMRRVDILVVNNPMLSAVVEAMMSEQHQEEGQGEQGGDEDAKPPAHLPPLTLSSLQRLNFQQLEGAQGAAETSTHKALPAPHVAPTASRDRPRTPNNRPLLSPIMTNSRSGSPSRPPSGSTADVRGAALSPTPSAQPVPATAEGAVATQPVIADAQVANETAPAAADAPAAAKPKRPFGGLRGSISNLKDAKTSVRPAPRASVVPPVGTDGTVPAGGAGGVPPLPKVGDHPGVRRPSILAPAARTARGSVSVSRGGLRGRTSNAGRGSISKGSKGFRLRFSARGEVPFTSTLAESYPLLFQHRVRLERELESALTLAEEKGLTCIAEDTLVRGMLPPSDKRLREIRQRLRQPGLELLESPVPLVIRIAEPEEPSMEIIDTKHAYRKASKRRATIVKPTIVRLSTGWGAVTSKVDCWMTYEEYTRLTEGLNTKFRRFIGEKFVHDDATWPDPFSKVVPVYMPEDYDMLGKMRARGGVDTSGSVFSVINRLDVRGHQEHWVFSDNYLVRGDAKPRASFLM* # ORIGINAL: g4918.t1 original gene structure, not modified by PASA NODE_732_length_18393_cov_42.4539 AUGUSTUS gene 5853 6891 . + . ID=g4918;Name=g4918.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS mRNA 5853 6891 . + . ID=g4918.t1;Parent=g4918;Name=g4918.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS exon 5853 5940 . + . ID=g4918.t1.exon1;Parent=g4918.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS CDS 5853 5940 . + 0 ID=cds.g4918.t1;Parent=g4918.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS exon 6050 6891 . + . ID=g4918.t1.exon2;Parent=g4918.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS CDS 6050 6891 . + 2 ID=cds.g4918.t1;Parent=g4918.t1 #PROT g4918.t1 g4918 MSIIQINDISELADSITYRLSRVVARRIEAHNAAANPHDNQASVETQFAQFLPTVDSRAQDHIVPAINGCMPGRDPHSHGLANSQHVVRHSSAWLSTGGSPSTALSAPTGTCDHTTRHQAPCSSELTQLSEPAGLSTMTQLTKTAGDGLRKRRATDDAIVPMPSGKRAPAFSRAFGPAADKSDPVRLTARTTSTAQGATPTANEGGNEHCGSSPAESSPLCDLDAHVLADGFSDDNQVHSWPGSHPCQWSPTETILCSNSAWARQHGPPSRAPLTPDAHGAARGSTSQVIDFDGIDDDADAAVSWTDFQ* # PASA_UPDATE: g4916.t1, single gene model update, valid-1, status:[pasa:asmbl_9101,status:12],[pasa:asmbl_9102,status:12], valid-1 NODE_732_length_18393_cov_42.4539 . gene 189 2231 . + . ID=g4916;Name=g4916.t1 NODE_732_length_18393_cov_42.4539 . mRNA 189 2231 . + . ID=g4916.t1;Parent=g4916;Name=g4916.t1 NODE_732_length_18393_cov_42.4539 . five_prime_UTR 189 190 . + . ID=g4916.t1.utr5p1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 189 316 . + . ID=g4916.t1.exon1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 191 316 . + 0 ID=cds.g4916.t1;Parent=g4916.t1;5_prime_partial=true NODE_732_length_18393_cov_42.4539 . exon 440 541 . + . ID=g4916.t1.exon2;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 440 541 . + 0 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 763 936 . + . ID=g4916.t1.exon3;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 763 936 . + 0 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 1117 1234 . + . ID=g4916.t1.exon4;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 1117 1234 . + 0 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 1439 1532 . + . ID=g4916.t1.exon5;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 1439 1532 . + 2 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 1727 1807 . + . ID=g4916.t1.exon6;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 1727 1807 . + 1 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . exon 1953 2231 . + . ID=g4916.t1.exon7;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . CDS 1953 2211 . + 1 ID=cds.g4916.t1;Parent=g4916.t1 NODE_732_length_18393_cov_42.4539 . three_prime_UTR 2212 2231 . + . ID=g4916.t1.utr3p1;Parent=g4916.t1 #PROT g4916.t1 g4916 TRSGPRSNSSSSSIPSRYQTVIVNGGEKKGFGGSASRFGDAVREVPGPGAYQNQTDLALPNDSLSKKGMGNGFVSKTNRFIREPLPEGASPSLYDPRPPRQHEDFCRSSATASFHPPIARPKEDKPGPAPNSYNVLESEHAVRRDTTVTAAFKSRAKRTTTFEDELNTDIPSPSQYAPHIPTQDPVPYASAFKSHTDRIGVVNFMAGRPEIPGPGAYELRSSKPQQHQGPFTKLRAQPIAPEAIVIPSPPTPPGPAHYNTAADPVQKRYISSSMFLSQTQRDEILARRTDAPGPGRYRPRMLTRHTSFNYNQTGTWV* # PASA_UPDATE: g4922.t1, single gene model update, valid-1, status:[pasa:asmbl_9106,status:12], valid-1 NODE_732_length_18393_cov_42.4539 . gene 15143 18175 . - . ID=g4922;Name=g4922.t1 NODE_732_length_18393_cov_42.4539 . mRNA 15143 18175 . - . ID=g4922.t1;Parent=g4922;Name=g4922.t1 NODE_732_length_18393_cov_42.4539 . five_prime_UTR 18173 18175 . - . ID=g4922.t1.utr5p1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 18001 18175 . - . ID=g4922.t1.exon1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 18001 18172 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 17837 17895 . - . ID=g4922.t1.exon2;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 17837 17895 . - 2 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 17626 17733 . - . ID=g4922.t1.exon3;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 17626 17733 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 17435 17530 . - . ID=g4922.t1.exon4;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 17435 17530 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 17209 17352 . - . ID=g4922.t1.exon5;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 17209 17352 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 16968 17114 . - . ID=g4922.t1.exon6;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 16968 17114 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 16737 16880 . - . ID=g4922.t1.exon7;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 16737 16880 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 16470 16617 . - . ID=g4922.t1.exon8;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 16470 16617 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 16132 16306 . - . ID=g4922.t1.exon9;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 16132 16306 . - 2 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 15996 16031 . - . ID=g4922.t1.exon10;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 15996 16031 . - 1 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 15686 15860 . - . ID=g4922.t1.exon11;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 15686 15860 . - 1 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 15368 15521 . - . ID=g4922.t1.exon12;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 15368 15521 . - 0 ID=cds.g4922.t1;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . exon 15143 15252 . - . ID=g4922.t1.exon13;Parent=g4922.t1 NODE_732_length_18393_cov_42.4539 . CDS 15143 15252 . - 2 ID=cds.g4922.t1;Parent=g4922.t1 #PROT g4922.t1 g4922 MSQNSSAMRGHPFPVQDGKNGMTTGPLSPRSIESRLCLFIVVTMMSWLTIKGLLSCNEWQLKGFPGAHRGWIPNRAQDLSDSQYRSWRSFFPILLGGLFVHVGVGKLLLGCNGVRARPFYAAAIGAASLVYMHGASSLWLLLILLANFGLSRALGGRSALPLCVWALNCGILFACDYYSGFSFAAISDILTPLDLWRGVLRWHVHFNLTFLRLISFVMDHHWAVCAAQSATARKVDLRPHSPADLDDYEARVSMHLPLSQYSLFHAFAYMFYLPLYIAGPVLPFNAFVSQIYSPQSSFDLRYCVSHLLRVVAYMGGLEIALHYLYYYGLNEGRAWSWPGVMPAWEVALAGFFTLNFMYVKFLTIWRFFRVWALLDGIEAPENMRRCVNNNFTFAGFWRAWHASLNKWIVRYMYVPLGGTRTQAWSVWIIFTFVGLWHDLWWRWVAWAWLNCAFFNAEMIIVAFYRSKRLDSVRGWKWSRHVVALAGALDIFCLMVANLAILHGFQGTREYLSQMFIRDGGLSVFAGAFVLFYSAVLVMQDIRTRELVAAGKPPRF* # PASA_UPDATE: g4917.t1, single gene model update, valid-1, status:[pasa:asmbl_9104,status:12], valid-1 NODE_732_length_18393_cov_42.4539 . gene 2273 5124 . - . ID=g4917;Name=g4917.t1 NODE_732_length_18393_cov_42.4539 . mRNA 2273 5124 . - . ID=g4917.t1;Parent=g4917;Name=g4917.t1 NODE_732_length_18393_cov_42.4539 . exon 3764 5124 . - . ID=g4917.t1.exon1;Parent=g4917.t1 NODE_732_length_18393_cov_42.4539 . CDS 3764 5124 . - 0 ID=cds.g4917.t1;Parent=g4917.t1 NODE_732_length_18393_cov_42.4539 . exon 2273 3584 . - . ID=g4917.t1.exon2;Parent=g4917.t1 NODE_732_length_18393_cov_42.4539 . CDS 2327 3584 . - 1 ID=cds.g4917.t1;Parent=g4917.t1 NODE_732_length_18393_cov_42.4539 . three_prime_UTR 2273 2326 . - . ID=g4917.t1.utr3p1;Parent=g4917.t1 #PROT g4917.t1 g4917 MEPTIAQCPEKGILELPREIAHDILMLLCATDLCAVARTCRALNSVVRVALHRKAPAIILRYLDWIGVCRLPQRPIRKSFPRTQAEYALAHLYIGLYRDAVLAAYSSNAVGIRKCPLLTDLIARRRILELKYEDFVERGVIAALRGDACRCESYCSRDKCRVAMRLDADLVAWCQWLDETEFGVRMRRGDEAEQDPLPMLTCCNIEAIPLRTDSGAGPLRFGHPESAEELLREHGCQPNDAIAMVASQIDRSYDYSAGAGAFFSREATRLAACHLIIHRSVHVPSGGAVIDFVLGTYCAADVLCWGRLRDAGVAYSFYMNRHIGFPTHDALSTSFPWLTMNASEPRSDVGNAHFWLASANMRRSTPPKPEHLAKIDLSRLAWPKRGRFPLLTYFVGELDSSALPTLRALCDEYLRRGVVVDLNRAAEGAGSVPLHHATYGFGATRDIDNTIPAIVELVRRGARMPAEVPLAFLRHRCIFPVPDPVVIGHGEALTEAAQSVAMVTHLRAESERHVMLGPFSAYFIGWLFGEHQRLALKRGDNAIVRHEYLHFLTSLDATIFPIPDRDELGYCLAVVSLLTAAYRWGNDATMLLAARELAACGADPLLHVRGKDTYRRITNSHLSPSAESLFGEAIAKRTSALLSRTERNLTIALSAFESSCRHLVWIADTMRLVGMPVQVTSGCADGVEAPAHAAAAEARGNARNLARSPSTAIGAKSAPQLTSFGTPMLRDALNAAFDERALQHAATEWPIATFAKLISSATDPAFVTFVDHLVHMVRRQTERAWSAPSAKIVDDYIMGAVQDVSSRKPRLPWPTQLTEYVASVAARAQREAGDAVTMETRTGKRKRLETAKAVPEAVTAKRVRRGGAETRA* # ORIGINAL: g4921.t1 original gene structure, not modified by PASA NODE_732_length_18393_cov_42.4539 AUGUSTUS gene 12629 14841 . + . ID=g4921;Name=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS mRNA 12629 14841 . + . ID=g4921.t1;Parent=g4921;Name=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS exon 12629 13010 . + . ID=g4921.t1.exon1;Parent=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS CDS 12629 13010 . + 0 ID=cds.g4921.t1;Parent=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS exon 13194 13372 . + . ID=g4921.t1.exon2;Parent=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS CDS 13194 13372 . + 2 ID=cds.g4921.t1;Parent=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS exon 13603 14841 . + . ID=g4921.t1.exon3;Parent=g4921.t1 NODE_732_length_18393_cov_42.4539 AUGUSTUS CDS 13603 14841 . + 0 ID=cds.g4921.t1;Parent=g4921.t1 #PROT g4921.t1 g4921 MVVRATALAALVVLVVLHMCVAPCSAATRTFELNVTDTVRNPDGFGKLIKSYNGLLPGPVIRVTKGDDVVVRVNNRLLGEGTTIHWHGVTMKGLPYMDGVSQLSQCPINAGESFTYRFTATDAGTFWYHSHHGVQYGDGLAGMLIVDDPVNPYRDQYFAEYNLFVQDWDHMPASFSYLNLTNGADASGPGNSPVSFVSALINGKGVSHCTTSRWNPHNHALGCITQNTIDNVTIFDVSPGKMYRFRIVNGGSQFPFLLSIDDHEMTIIASDGHYVHPQVVSQLRVAIGERYDVLVQVNSTARARSFLIRAAVGHLDVGGTTYAVLRLPSAPMPLSTDKYITAALNVSDPSPTQASGFSTLRAYSVSQAPPSTLSTANPLRLTLDLSAEGRFVINDVPYSPPARPLSFSEPAPSLYESSESENALPIYEFAAGEVAFVVLENYNDYIEHPFHLHGHGAWILGVGSNGSIYTNESVSELNLVNPPMKDSFEVPAYSWVAFAFVANNPGYWLFHCHADFDLADGMAVVFADAPELQPGLPLGFPVCGAPSLQEEETAADCEKILAEASEKETKVLNTSIALIVVAFCAVLFATFLLTCRKNM* # PASA_UPDATE: g4920.t1, single gene model update, valid-1, status:[pasa:asmbl_9105,status:3], valid-1 NODE_732_length_18393_cov_42.4539 . gene 11298 12031 . - . ID=g4920;Name=g4920.t1 NODE_732_length_18393_cov_42.4539 . mRNA 11298 12031 . - . ID=g4920.t1;Parent=g4920;Name=g4920.t1 NODE_732_length_18393_cov_42.4539 . five_prime_UTR 11987 12031 . - . ID=g4920.t1.utr5p1;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . exon 11901 12031 . - . ID=g4920.t1.exon1;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . CDS 11901 11986 . - 0 ID=cds.g4920.t1;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . exon 11634 11743 . - . ID=g4920.t1.exon2;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . CDS 11634 11743 . - 1 ID=cds.g4920.t1;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . exon 11298 11461 . - . ID=g4920.t1.exon3;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . CDS 11334 11461 . - 2 ID=cds.g4920.t1;Parent=g4920.t1 NODE_732_length_18393_cov_42.4539 . three_prime_UTR 11298 11333 . - . ID=g4920.t1.utr3p1;Parent=g4920.t1 #PROT g4920.t1 g4920 MVATKINANFLNAIRVSFSAWDARSASAREFLRYARSSVTASNPKCVVESDIRTDGADPTIEITYVDGSKEVLQTKDFTIQPLLKVLKDRVYTLEIRQLIKTGQGAQ* # PASA_UPDATE: g14012.t1, single gene model update, valid-1, status:[pasa:asmbl_8599,status:12], valid-1 NODE_6352_length_587_cov_100.859 . gene 1 587 . - . ID=g14012;Name=g14012.t1 NODE_6352_length_587_cov_100.859 . mRNA 1 587 . - . ID=g14012.t1;Parent=g14012;Name=g14012.t1 NODE_6352_length_587_cov_100.859 . exon 1 587 . - . ID=g14012.t1.exon1;Parent=g14012.t1 NODE_6352_length_587_cov_100.859 . CDS 1 587 . - 0 ID=cds.g14012.t1;Parent=g14012.t1;5_prime_partial=true;3_prime_partial=true #PROT g14012.t1 g14012 DLLSFLEYKTTGSQLCNSLITSGILPIPESFVPIIENAICGDIPNNVTTVDEMCTEIQVDIVPKIDSLLEVYCSFVLQNDTECQALNATLQGVIAEIPMGCKVLKIVQGVVNKFGYFRIPPASFANPFYGIPQIAQAEPRLASEPKIAGVDGGFVDSMGIPFWPLLQAERAVDLIIAIDAGSDTAQNLPNGKAIV # PASA_UPDATE: g6843.t1, single gene model update, valid-1, status:[pasa:asmbl_5296,status:12], valid-1 NODE_2950_length_4657_cov_68.8287 . gene 175 4148 . + . ID=g6843;Name=g6843.t1 NODE_2950_length_4657_cov_68.8287 . mRNA 175 4148 . + . ID=g6843.t1;Parent=g6843;Name=g6843.t1 NODE_2950_length_4657_cov_68.8287 . five_prime_UTR 175 241 . + . ID=g6843.t1.utr5p1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 175 324 . + . ID=g6843.t1.exon1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 242 324 . + 0 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 547 612 . + . ID=g6843.t1.exon2;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 547 612 . + 1 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 829 893 . + . ID=g6843.t1.exon3;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 829 893 . + 1 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 1085 1225 . + . ID=g6843.t1.exon4;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 1085 1225 . + 2 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 1527 1726 . + . ID=g6843.t1.exon5;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 1527 1726 . + 2 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 2027 2308 . + . ID=g6843.t1.exon6;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 2027 2308 . + 0 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 2597 2717 . + . ID=g6843.t1.exon7;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 2597 2717 . + 0 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 2928 3002 . + . ID=g6843.t1.exon8;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 2928 3002 . + 2 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 3334 3416 . + . ID=g6843.t1.exon9;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 3334 3416 . + 2 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . exon 3577 4148 . + . ID=g6843.t1.exon10;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . CDS 3577 3924 . + 0 ID=cds.g6843.t1;Parent=g6843.t1 NODE_2950_length_4657_cov_68.8287 . three_prime_UTR 3925 4148 . + . ID=g6843.t1.utr3p1;Parent=g6843.t1 #PROT g6843.t1 g6843 MSQILTTGHGSPVYDNQNSMQAGQFGPLLLQDTHLIDKLAHFDRERIPERVVHAKGSGAHGYFEVTHDISHICRAKVFSQIGKRTPVLTRFSTVGGEKGSADTARDPRGFAVKFYTEEGNWDLVGNNTPVFFIADPSKFPDFIHTQKRNPQTNLPDPNMFWDFLSLTPESVHQVTILFSDRGTPDGYRHMNGYGSHTFAFVNAEGKRHWVKFHFKTEQGIKNLPAAEAKRIAGENPDYAQQDLFEAIERGDSPAWRVFVQVMKEEDAAKYRFNPFDITKVWPHSDYPLQPVGRMVLNRNPENYFAEIEQAAFSPSHLVPGIEASPDRMLQGRLFSYPDTHRHRLGANYLQIPVNCPFAARVINHQRDGAMSINGNGGSAPNYEPNSHGGPKESKAHPDITPVLLAGATGRFSKHWPSNKDGDRYDYVQAGNLYRIMTPQQKSNLIDNIVGHLRNANRDLQKRQVEIFKKADAEYGSRIERGLAQAKL* # PASA_UPDATE: g11475.t1, single gene model update, valid-1, status:[pasa:asmbl_8913,status:12], valid-1 NODE_696_length_18909_cov_43.2951 . gene 11397 12284 . + . ID=g11475;Name=g11475.t1 NODE_696_length_18909_cov_43.2951 . mRNA 11397 12284 . + . ID=g11475.t1;Parent=g11475;Name=g11475.t1 NODE_696_length_18909_cov_43.2951 . five_prime_UTR 11397 11468 . + . ID=g11475.t1.utr5p1;Parent=g11475.t1 NODE_696_length_18909_cov_43.2951 . exon 11397 12284 . + . ID=g11475.t1.exon1;Parent=g11475.t1 NODE_696_length_18909_cov_43.2951 . CDS 11469 12215 . + 0 ID=cds.g11475.t1;Parent=g11475.t1 NODE_696_length_18909_cov_43.2951 . three_prime_UTR 12216 12284 . + . ID=g11475.t1.utr3p1;Parent=g11475.t1 #PROT g11475.t1 g11475 MDPGVTWLPFLWKTPIAGTADEVAEAEKQLGIKFPTDFVEAITANQGALPEPHSFDYMAFESSTKRTGTAGALFHLRTGERDALARYNIVSRVNEIRSVGGRKTLIPFCEETTRGNYVCLDYGEDESTPRAEPTVVVLDFELMVTSDVAESFMDFLVALYDNGPLNKSHVTEDGDDEDDEVVAGSSEDYACNECLGLIEGVRWHCEECFEYDVCDACMRKTTTDGALVLAEGDEHKKHHKLTKHAVSS* # PASA_UPDATE: g11473.t1, single gene model update, valid-1, status:[pasa:asmbl_8915,status:12], valid-1 NODE_696_length_18909_cov_43.2951 . gene 1152 4756 . + . ID=g11473;Name=g11473.t1 NODE_696_length_18909_cov_43.2951 . mRNA 1152 4756 . + . ID=g11473.t1;Parent=g11473;Name=g11473.t1 NODE_696_length_18909_cov_43.2951 . exon 1152 2870 . + . ID=g11473.t1.exon1;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . CDS 1152 2870 . + 0 ID=cds.g11473.t1;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . exon 3126 4241 . + . ID=g11473.t1.exon2;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . CDS 3126 4241 . + 0 ID=cds.g11473.t1;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . exon 4426 4756 . + . ID=g11473.t1.exon3;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . CDS 4426 4728 . + 0 ID=cds.g11473.t1;Parent=g11473.t1 NODE_696_length_18909_cov_43.2951 . three_prime_UTR 4729 4756 . + . ID=g11473.t1.utr3p1;Parent=g11473.t1 #PROT g11473.t1 g11473 MLDFSRSTLLWTFACIMAVPLGIVLIYLRRMRRQQLRWTASQEIIVDRDSLQRKRSRKFKRLGNTAPTPPRIRSRDESPSSLSMGRPRSGSSGSTGDNGALAAASASSSGMAALRSHSHDAMRRLGSSNSLSSATNMAIMSTSESDATTAITSSAGGVSLSSSSRPQRHQSPAATARRALELTPSGKRSHSMTALSPRDVPTFNVLCRVNRSDIEDSPPATRPMDTLRDLFAWRPGFDEFNVARIALTQRIGDDLGKPRLLVCHDMMGGYVQDQYPQGRHGCETFRLYHWQHIDVFVYFSHHLVTIPPPGWTNTAHNHGVRVLGTFITEWDEGARVCAEVFATIDSAEKLAAALADVASYYRFDGWLINIENAVAPSLLPHVAHFLRVLTTLMKATAEVSHAGPTAAQGVTRASTGGLVIWYDSVVSPSGELKWQDELNQSNADFFDACDGIFLNYTWKPPKLASSAAKAASMGARQRDVYAGIDVFGRGSYGGGGYNAGVALAEIAQAGLSAALFAPGWVYETQGLANYQANQDKLWSALAPLCARHCPASLPFVSTFDVGSGERVFVDGHEVWHTQWTNLSNQSFQPSFRAELYGLPTASGCKGAVDTAKAFNGGSSFRLVGTRGALTKAAQPGLQPGGLQPGCAARIFTAALSLSSPVIVSYTYMIEASPNPRSSVELDVELRLVIDGVESVGPRMIVLGGDDECAGFRGRLSPGFPGATASDLDSSYDTSDADSVANCDGGVAQLPYKVLPTDDTPLDARLHERYAIMRSPRMVANMSVVASTVVDATGDRVWRYGTAPGETKRLLLAAEGAGSDVPREDTALAAALSTRMLAERSPAVGTSRWITRHYVVASRELRNCRIAEVQFAAVPRAQSSSGARSDAWDVRLGQLRVTECRSLLGRRRTVAEIRCTDVEIRRCAEAPELRLSVSLSWQTPPLPLHQVDPASAEVVALSLNASTSSITGTPLGWAEGFAYFDIYDYSRRKFVGRSFANSFRLTDLPLPPGVQDGHVLIAVRPVTLSHWKVPIDDAPRVRLQWSYSED* # PASA_UPDATE: g11476.t1, single gene model update, valid-1, status:[pasa:asmbl_8914,status:3], valid-1 NODE_696_length_18909_cov_43.2951 . gene 12342 17710 . - . ID=g11476;Name=g11476.t1 NODE_696_length_18909_cov_43.2951 . mRNA 12342 17710 . - . ID=g11476.t1;Parent=g11476;Name=g11476.t1 NODE_696_length_18909_cov_43.2951 . five_prime_UTR 17452 17710 . - . ID=g11476.t1.utr5p1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 17258 17710 . - . ID=g11476.t1.exon1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 17258 17451 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 16950 17088 . - . ID=g11476.t1.exon2;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 16950 17088 . - 1 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 16578 16700 . - . ID=g11476.t1.exon3;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 16578 16700 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 16119 16290 . - . ID=g11476.t1.exon4;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 16119 16290 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 15627 15755 . - . ID=g11476.t1.exon5;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 15627 15755 . - 2 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 15178 15446 . - . ID=g11476.t1.exon6;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 15178 15446 . - 2 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 14748 14867 . - . ID=g11476.t1.exon7;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 14748 14867 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 14464 14540 . - . ID=g11476.t1.exon8;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 14464 14540 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 14050 14260 . - . ID=g11476.t1.exon9;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 14050 14260 . - 1 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 13704 13811 . - . ID=g11476.t1.exon10;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 13704 13811 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 13422 13565 . - . ID=g11476.t1.exon11;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 13422 13565 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 12933 13097 . - . ID=g11476.t1.exon12;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 12933 13097 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . exon 12342 12746 . - . ID=g11476.t1.exon13;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . CDS 12657 12746 . - 0 ID=cds.g11476.t1;Parent=g11476.t1 NODE_696_length_18909_cov_43.2951 . three_prime_UTR 12342 12656 . - . ID=g11476.t1.utr3p1;Parent=g11476.t1 #PROT g11476.t1 g11476 MAGSVRIQEGQYTSTIYTLIRDHKYDEVVKILSVELQEFPKSRAALSLLGYCYYHMQDYANAADCYEQLTKLYPDVDDYKLYHAQSLYEASLYQEAVKACSQIENQSYQPKVDKLIAAIKYEQDDLPGAKAMVEASTDDADSIVNQGCILFKEENYEGACIKFSEAMQVLGYQADLSYNIALCFYKLKQYAPALKHIADIIERGIKEHPELSVGMTTEGIDVRSVGNTQVLHETALIEAFNLKAAIEYQLKNYDAAKEALTDMPPRSEEELDPVTLHNQALMNMEERATEGFQKMQFLLQQNPCPPETFGNLLLLYCKYQYYDLAADVLAENAHLTYKYLSQYLYDFLDATITQQTSPEEAFRKFDDIASKHTDTLRKLTKQVQDARQNYDDESVKKAVNDYDQAVERYIPVLMAQAKIYWDLDNYPTVEKIFRKSVEFCNEHDVWRLNVAHVLFMQENKFKEAIGFYEPIVKKHYDNILDVTAIVLANLCVSYIMTSQNEEAEELMRKIEKEEERLAYETDKKVYHLCIVNLVIGTLYCAKGNYEFGISRIIKSLEPFNKKLGTDTWFYAKRCFLSLIENMAKHMIILKDQVVHEIIEFMENCELHGKTVLAVIEQPLDLDPLDPGKNNVAYEARLLKSLFLRLV* # ORIGINAL: g11474.t1 original gene structure, not modified by PASA NODE_696_length_18909_cov_43.2951 AUGUSTUS gene 5017 10760 . - . ID=g11474;Name=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS mRNA 5017 10760 . - . ID=g11474.t1;Parent=g11474;Name=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 10629 10760 . - . ID=g11474.t1.exon1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 10629 10760 . - 0 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 8927 10526 . - . ID=g11474.t1.exon2;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 8927 10526 . - 0 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 8173 8715 . - . ID=g11474.t1.exon3;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 8173 8715 . - 2 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 7937 8037 . - . ID=g11474.t1.exon4;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 7937 8037 . - 2 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 7580 7661 . - . ID=g11474.t1.exon5;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 7580 7661 . - 0 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 7385 7430 . - . ID=g11474.t1.exon6;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 7385 7430 . - 2 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 6964 7129 . - . ID=g11474.t1.exon7;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 6964 7129 . - 1 ID=cds.g11474.t1;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS exon 5017 6768 . - . ID=g11474.t1.exon8;Parent=g11474.t1 NODE_696_length_18909_cov_43.2951 AUGUSTUS CDS 5017 6768 . - 0 ID=cds.g11474.t1;Parent=g11474.t1 #PROT g11474.t1 g11474 MANRRPPMAGVVVSTTGLSGDDRERMHSMIHDLGGSSQKDFTSQVTHLISIRAACGSKYKVAARIGRPIMSMSWVTEAHALRSNPHFNACDDDFVMRHTLPVFAGLRISVTGMTLEQRQHIERIIRANGGTYTGDFTQECTHLIADKPVGEKYAFAVDNRITVVRSAWLFDSEKARACLDEAHYGLHAERDAKLDARPAHTAPIAPSVTRGYSLLAEIAETEEERTFDVSKQSGGGEYLASCTIYMSGISGERTQRLRRIIRDGFGTRQDLLEQSVTHVVIGSRDDKDVGILRGLSSRPHLVSPAWLIQCAKTAMLAPVDPYRVWDRGFPEWARPDPPARAETRPLPQISASASASRTDDIRESAPLARSNSFARRLDAFGMDDATQSPTAPTSTHAPSASAAGGSVGGASSFTSSTALSHQQHGSAVTGAAASSGGAGGNNAGGNNANVGGNADSALFSGMEFRALGLSESEVLRFARAVLKRGGLFSPSGVLTWSVPRDRRYLIVPFEYVTAVAASNEITMATAVSPLWLRECLERKVLLNTRLRPTFTPCTRPPPGFDMEGVVLSVSGYEGGERDGISALASALGASYTERFTRTNTHLVCASATGEKYARAVAWGVPAVSIEWLHDCARQWSLVPVDDYLLASDGDRDSNVPLPASQLFKSRPNPVIAPGNSHPARTVGATSGDQHAHARAGDADSNDSVGLMRGGRPAGEKGKGFRPSFETDEAMTALVTPDRNGGKGDVGGRVLRARVVDTPGGLGEMLHDTLQRAVKRSRATRDQDADHHDGDEQPPSKRAAIAFTGRGGPSAAVPDVAPRKGGDDSSSPPRPLEGFSIHVSTSLKDHRNLCVMVCSMGGVTAPSVAVATHLVARGKQNSNARDIKAAKAQRKKIVAPEWLFECERLGSAQNEALFPHTLNPKMSLSPSLQLGSQSNEGATNDTLREVFPDAGNRAPAGLAVSDSVDDLASTNTAAAGAVHTHVPPGMPAGDGVDGASVDATPALEMSKRTVENLERLLNATKHVAGGARRRNRRSVASASANVSSVDAAAANGDGGGPGVEGTPGGGVGASVGNPASPTLGSPTNERMVPEERYKETVTYDDPVVRGERRKMRVTRSNSSGVDGGRDGNGGAATAAGNSASAVGLGRSAGGESLLKLPRRTPRKHGDALPLASSPGGSASKTRGSVTSPPRFLLSAMKPEMKDMCTKIVLSLGGTVMDLQHFSRDCTHLVVGTPSKAEKYLAACATGKWVLRTSFLTASRQAGKFVPEGPHEWSADNAPDAALLPLVSAPRQWRLRIAGSANPKGAFDGWRVILSVAPEKHAGFHSLLTEGGAVVVGDGGGSGRSSSAHQATHAFIDASYEGSASVNISGLANRGVLCLRPDFIAEFIMQGQEPPYAGFLVGAAAVTADVFSAAEGRFRTSHRGAAPAPLLPAAAGGDDDDDTKGGGTAGARGGAKRPLASDGAPQSAGRTKRKR* # PASA_UPDATE: g6319.t1, single gene model update, valid-1, status:[pasa:asmbl_4599,status:12], valid-1 NODE_2589_length_5769_cov_44.5529 . gene 377 5500 . + . ID=g6319;Name=g6319.t1 NODE_2589_length_5769_cov_44.5529 . mRNA 377 5500 . + . ID=g6319.t1;Parent=g6319;Name=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 377 504 . + . ID=g6319.t1.exon1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 377 504 . + 0 ID=cds.g6319.t1;Parent=g6319.t1;5_prime_partial=true NODE_2589_length_5769_cov_44.5529 . exon 750 1187 . + . ID=g6319.t1.exon2;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 750 1187 . + 1 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 1437 1570 . + . ID=g6319.t1.exon3;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 1437 1570 . + 1 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 1761 1968 . + . ID=g6319.t1.exon4;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 1761 1968 . + 2 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 2324 3190 . + . ID=g6319.t1.exon5;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 2324 3190 . + 1 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 3425 3695 . + . ID=g6319.t1.exon6;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 3425 3695 . + 1 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 3991 4204 . + . ID=g6319.t1.exon7;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 3991 4204 . + 0 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 4442 4575 . + . ID=g6319.t1.exon8;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 4442 4575 . + 2 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 4994 5140 . + . ID=g6319.t1.exon9;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 4994 5140 . + 0 ID=cds.g6319.t1;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . exon 5476 5500 . + . ID=g6319.t1.exon10;Parent=g6319.t1 NODE_2589_length_5769_cov_44.5529 . CDS 5476 5500 . + 0 ID=cds.g6319.t1;Parent=g6319.t1;3_prime_partial=true #PROT g6319.t1 g6319 VHLTYCDLRWGINEEQSSRFETISICLRELVATDVFICMLGDRYGWHQDPTANKKDVILQRTFDHAATEFPFVDSLRTRSLTELEIRHAALNSPCVVEKAKCRFFFRDRDDTLSRIPAGTDATVFSDSQSYARSQLAALKEEIVTSGLPVTRNYRGVEAVGEEVLSTVRATLDERFPKGSEPTKLHRERQMHESFADIRSRVYIGGEHYYDKLDSHAAATENPFLCVLGPSGSGKSSLVANWIVRFRRLNPDALVIMHFIGCSHESTSVAAILLRMMGELKESFGIDGDLPTDPEGIILLFPTFIARLEEHKDRKVIIVLDALNQLENDSGALQLGWLPTKIPSNLRIVLSAIDNDASQSAAAAADNNNNNNSNSNDVSAGKAAIENEKETIVVSALRKREIPSLRVAPLNSATRQQLAKDFLRAYNKTLSSEQLTLVCDNPSSSNPLYLRTLLQELAVFGSFEDLTVAIERYIAAPSNQALFEMVLIRLERDYSEWLVSTTFGLVWASRRGLSEAEMLDMLQAEAPAAEKETVAFRFSRLRFAVVDYMTRSGLLNFFHDHLRQAVEKRYCEETKAAALRKIITSHFERQVTLLPNAPYDKDADERAVFRARIAEELPFQLEKRSASDGLFQCVTHIGLLGVLFAPAYRFDLLRYMRLADQPKVIQRIVREAVPSIVAHPNKAAAFEALKEIGVLFKTVGMYDDALTVNRALLQNALQWFGKTDTRTILAKFAVSMSLGNLGQLSGSFGALNMRTESMNEMEAAVGPDNLDVAMIKFALADVYYVQKKFEAAYPLYLEALRVRELLLKGDHPALAESYSGMGIIEEARNQFDTCVAFYNKALAMRERLFGSDHPD # ORIGINAL: g2190.t1 original gene structure, not modified by PASA NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS gene 769 2700 . + . ID=g2190;Name=g2190.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS mRNA 769 2700 . + . ID=g2190.t1;Parent=g2190;Name=g2190.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS exon 769 2700 . + . ID=g2190.t1.exon1;Parent=g2190.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS CDS 769 2700 . + 0 ID=cds.g2190.t1;Parent=g2190.t1 #PROT g2190.t1 g2190 MDGLPRDILCRIVRLLHTRAVNGSRADGDDADTLPARLAAVAAEGPVCRWWIRALWDGVVSLRVSFAPRGGSDGSGWLYVLPTPGTAAVSGADISLSSDRGASAVMGSGAESVLRGEEGGSKDSDANDDEAHAVCSCGTCAAAAHGTARQRLLWLAAQVDPARLTAVTFDFGGARGCGWRALWRLAGVFLRAVAARGASQASHGSASAAGGRLAHVGLLSFSPDVRTPAGGLDKGAGSGGEEEEEQDECDDGIDFSAFPGSVRSMALSGGCVHLAGLLPRVTTPFAALESLAVDSLTNALVARLVGLRERDSANDHPQPASGALSALRALDVAWDPSAVSVAALASLGDAIGSTLASLSVRVVYAASSPKASFPHAVVREGLTGLVRRCASLATLELSTPLGDDALVLELADLRAQLSRVVRFGLSVARASESDMSDFIMAELVSAMPLVASVELRFAYVSDCVCRVLASLRHLRRVLIAGSVELAGQSLELLSAAHALRRCAVELHGDDVDVANRPNRGPIRNITHLAYVCVDSPRDVQASVARLAPRCPDLRELRFENSALPFAPDVLPRVIGGGGCPLLRRLCIRRVHWTGVPGGLLATLASVEHLREIVVSGVGAAAVAVERAPEIASLRAAGKTVVMG* # ORIGINAL: g2191.t1 original gene structure, not modified by PASA NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS gene 4670 5994 . - . ID=g2191;Name=g2191.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS mRNA 4670 5994 . - . ID=g2191.t1;Parent=g2191;Name=g2191.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS exon 5860 5994 . - . ID=g2191.t1.exon1;Parent=g2191.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS CDS 5860 5994 . - 0 ID=cds.g2191.t1;Parent=g2191.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS exon 4670 5620 . - . ID=g2191.t1.exon2;Parent=g2191.t1 NODE_2449_length_6214_cov_68.8394_potentialcontaminant AUGUSTUS CDS 4670 5620 . - 0 ID=cds.g2191.t1;Parent=g2191.t1 #PROT g2191.t1 g2191 MASGGREDANAATTTQWQLRARLHAAVEEGATVDEIAHLIDRLDNVDVADADGHTALMLAAAAGNLRVLRLLLSRGSLVSVFDTRGQTAAMHAARCGRPFAVAMLAAAGASVTRADASGRTCAHHAAAGGHVGALRALQGLRADFSARDLAGMTPLHVAVETAAGEEAARWLLDAGCDPLVAASNGETPADIVRRRRACDAARAGEGMELRTGHGGVRDAPMSSSVAQATVVPEDDLLTALSTRKRRGGASSNALSGWRAWLPASYWAASVAVTLWALVAAGCVGDTALALLGPAARTLLCCTVAFGVALFANLCLGDAGSVRVDTSSRGVLRRMVDGGDVVCPDVDDMCFSCDVVKVRIC* # PASA_UPDATE: g13021.t1, single gene model update, valid-1, status:[pasa:asmbl_2613,status:12], valid-1 NODE_1786_length_9258_cov_39.5918 . gene 7274 9153 . + . ID=g13021;Name=g13021.t1 NODE_1786_length_9258_cov_39.5918 . mRNA 7274 9153 . + . ID=g13021.t1;Parent=g13021;Name=g13021.t1 NODE_1786_length_9258_cov_39.5918 . five_prime_UTR 7274 7562 . + . ID=g13021.t1.utr5p1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 7274 7694 . + . ID=g13021.t1.exon1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 7563 7694 . + 0 ID=cds.g13021.t1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 7832 7984 . + . ID=g13021.t1.exon2;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 7832 7984 . + 0 ID=cds.g13021.t1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 8163 8315 . + . ID=g13021.t1.exon3;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 8163 8315 . + 0 ID=cds.g13021.t1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 8737 8862 . + . ID=g13021.t1.exon4;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 8737 8862 . + 0 ID=cds.g13021.t1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 9001 9049 . + . ID=g13021.t1.exon5;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 9001 9049 . + 0 ID=cds.g13021.t1;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . exon 9131 9153 . + . ID=g13021.t1.exon6;Parent=g13021.t1 NODE_1786_length_9258_cov_39.5918 . CDS 9131 9153 . + 2 ID=cds.g13021.t1;Parent=g13021.t1 #PROT g13021.t1 g13021 MGGLFSHSKRENGGAAGKNRVTAHDRAVLDLKVQRDKLKQYQKKIQVVLEREIELARQAVREGKKQKAILLLKKKKYQESLLEKTEQQLMNLEEMVNSIEFALVEQKVIEGLKTGNDVLTELNKQMDIDKVQQLMDDTQDAIDYQNEISDLLAGKLSSEDDEEVMRELEELAAAAEGREVEAAPREKKPELPDAPDHEPVPAPKGPMSGVR* # PASA_UPDATE: g13020.t1, single gene model update, valid-1, status:[pasa:asmbl_2615,status:3], valid-1 NODE_1786_length_9258_cov_39.5918 . gene 5201 7109 . - . ID=g13020;Name=g13020.t1 NODE_1786_length_9258_cov_39.5918 . mRNA 5201 7109 . - . ID=g13020.t1;Parent=g13020;Name=g13020.t1 NODE_1786_length_9258_cov_39.5918 . five_prime_UTR 7056 7109 . - . ID=g13020.t1.utr5p1;Parent=g13020.t1 NODE_1786_length_9258_cov_39.5918 . exon 6652 7109 . - . ID=g13020.t1.exon1;Parent=g13020.t1 NODE_1786_length_9258_cov_39.5918 . CDS 6652 7055 . - 0 ID=cds.g13020.t1;Parent=g13020.t1 NODE_1786_length_9258_cov_39.5918 . exon 5201 6487 . - . ID=g13020.t1.exon2;Parent=g13020.t1 NODE_1786_length_9258_cov_39.5918 . CDS 5740 6487 . - 1 ID=cds.g13020.t1;Parent=g13020.t1 NODE_1786_length_9258_cov_39.5918 . three_prime_UTR 5201 5739 . - . ID=g13020.t1.utr3p1;Parent=g13020.t1 #PROT g13020.t1 g13020 MDADNSDEEDILHRAGGRFALGKRFKGASAGGTSLAYIPVSQDTNHVPDSGNVPGHGHALDRCAMSSSPTGRGQKMALAWLFGRGRPLLKRLVMCAAVSVLCSIGIMAILQRSAIFDAVVKVLDALVQNIGTGFGGGVVLATLVFASAFPPIVGYGWLLFLCGYALGFPLGIAPAYTGALAGAVACFALSRTLLSGRAERFAAKYPLYRAVKTGLESGGLPLLLLLRLAPYPFALFNCILATTRLSFRSFIFVTALSLVKVVVHVYIGSRLHDVHDVVNGTKDKGEVAFATLGLCLCVIGGVGLYVVARRKLSEFSATDVAISTSTPPVETTHCASNAEREDGDVTCAVDVDSTVGLPKCAIALSRDTDETELVVMGRSTYAH* # PASA_UPDATE: g13019.t1, single gene model update, valid-1, status:[pasa:asmbl_2614,status:12], valid-1 NODE_1786_length_9258_cov_39.5918 . gene 298 1226 . - . ID=g13019;Name=g13019.t1 NODE_1786_length_9258_cov_39.5918 . mRNA 298 1226 . - . ID=g13019.t1;Parent=g13019;Name=g13019.t1 NODE_1786_length_9258_cov_39.5918 . five_prime_UTR 1162 1226 . - . ID=g13019.t1.utr5p1;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . exon 1058 1226 . - . ID=g13019.t1.exon1;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . CDS 1058 1161 . - 0 ID=cds.g13019.t1;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . exon 718 882 . - . ID=g13019.t1.exon2;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . CDS 718 882 . - 1 ID=cds.g13019.t1;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . exon 298 394 . - . ID=g13019.t1.exon3;Parent=g13019.t1 NODE_1786_length_9258_cov_39.5918 . CDS 298 394 . - 1 ID=cds.g13019.t1;Parent=g13019.t1;3_prime_partial=true #PROT g13019.t1 g13019 MSGAGPVVIVTGASRGIGKAATLRLAQLGARLVINGVNEDNLRKLSNELGDSNEHVCVAGDVADLAVCKRIVEATIAKFGRIDALVNNAGILGDVKKIIESDPREFARTLEVNVNGPFYLTQ # PASA_UPDATE: g68.t1, single gene model update, valid-1, status:[pasa:asmbl_9085,status:12], valid-1 NODE_729_length_18429_cov_40.4168 . gene 883 3313 . + . ID=g68;Name=g68.t1 NODE_729_length_18429_cov_40.4168 . mRNA 883 3313 . + . ID=g68.t1;Parent=g68;Name=g68.t1 NODE_729_length_18429_cov_40.4168 . exon 883 1347 . + . ID=g68.t1.exon1;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . CDS 883 1347 . + 0 ID=cds.g68.t1;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . exon 1596 1748 . + . ID=g68.t1.exon2;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . CDS 1596 1748 . + 0 ID=cds.g68.t1;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . exon 2170 3313 . + . ID=g68.t1.exon3;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . CDS 2170 3024 . + 0 ID=cds.g68.t1;Parent=g68.t1 NODE_729_length_18429_cov_40.4168 . three_prime_UTR 3025 3313 . + . ID=g68.t1.utr3p1;Parent=g68.t1 #PROT g68.t1 g68 MNRTASASNSRPTSAVARAMQASSGISQGYSSSTTLTKQSSREDVLSRQSNLGSNSRSGSTSNLTATYNAREYDSGISSRPQSQSQSRGGQSQPQSQSQSRAGDYGNQYDSRSQTASRASVRSAQEDVSAASSKAYLGDLMPCSVCGRNFNPTVLERHEPVCAKVAAKKRKVFDSKKHRVAGTDAEKYVGKPESAASVAAAAKKNAARSGAPAKKGGDWRRKHEEFIRLVRSARQATAIVKAGGNLADLPPPPPSENPDYVQCPYCDRRFSENAADRHIPFCKEQSSRVPRTAQNGVKSQKERLESQKVYTKTPGKTAAAAAAASGARRPSAGGEKQATAGSAARPPNGASAKGVSSVDKNESPRDRPMDKTMTVKSASGAPVRRTSETERPLKASSADIYRQAVEDPAAYEQPPPQKTAARPTQASQQASQQRTAGASYASGGGGGSAGAGGHSASSAGRGRGKFCFECGSQYPVESAKFCSDCGTRRV* # ORIGINAL: g70.t1 original gene structure, not modified by PASA NODE_729_length_18429_cov_40.4168 AUGUSTUS gene 9969 14770 . - . ID=g70;Name=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS mRNA 9969 14770 . - . ID=g70.t1;Parent=g70;Name=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 14398 14770 . - . ID=g70.t1.exon1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 14398 14770 . - 0 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 13862 14065 . - . ID=g70.t1.exon2;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 13862 14065 . - 2 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 13581 13734 . - . ID=g70.t1.exon3;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 13581 13734 . - 2 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 13204 13357 . - . ID=g70.t1.exon4;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 13204 13357 . - 1 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 12507 12896 . - . ID=g70.t1.exon5;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 12507 12896 . - 0 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 12163 12304 . - . ID=g70.t1.exon6;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 12163 12304 . - 0 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 11799 11839 . - . ID=g70.t1.exon7;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 11799 11839 . - 2 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 11443 11527 . - . ID=g70.t1.exon8;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 11443 11527 . - 0 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 10941 11001 . - . ID=g70.t1.exon9;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 10941 11001 . - 2 ID=cds.g70.t1;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 9969 10572 . - . ID=g70.t1.exon10;Parent=g70.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 9969 10572 . - 1 ID=cds.g70.t1;Parent=g70.t1 #PROT g70.t1 g70 MSLPHICIRVHSAPPTRLAPSTQVSDMHISRYEPAREAHFRQFLSEVVPAVRPSFTIASGDLTDARAHRGLIRTSGHQSATEWETYQACLEGVGLYDPAVWFDMRGNHDAWTVPSLNSTRNLFAEFSVTGKTGDGERRVYSRVVETPFGRYVFVFADVTPVPGPAAPFEFWASLTSDTLDEIEEEFERMSGSSANATVVTFHYTHSTTLFSHIRRGLHGHHLATLEQDFGWTAILAGHFHLPRMHMRTHSGGLELEVDDMMGSRAFRILALDNDLLSFADTELDRWPLVLITNPKDGRHILKSEVWQRMTLSTHVRALVFSPSPIKSVTLAIDGILLGTMDRVPTTDSPDASGTHSFSVRDSYGRLIGHQNSTATQPGGNGGLFALAWNPLPYALGSHDIEVVAVDMAGRQSVTQQTFRLDGHVQDLGLGGSQLLGYYELDLVVLPILATTYLFCMLGLLVYPKMNYRSTRKGCMWYDLKEENTVMKRLGAMNETIWKILFFFGMYFICGPLAIVPVGYDEWGAMFWWGALFHQSAIFALYPTIHALAFLSFVFAPTILLAGYIPRPTVLSPLRTTITTTTAAATAATTATETATDTAYTTPSASPPHRRSHNEQCVTTESLPTETTPLLNTAITHTRTSAHDASTGMDTPLYTHASDSEVSLTGRPSRIIIVLLYVELLVGSIVTVASLVVLFGWYGMLCGIGLSWFVVFAVAVATYGVYCGWKTPQPNMMVLV* # PASA_UPDATE: g69.t1, single gene model update, valid-1, status:[pasa:asmbl_9084,status:3], valid-1 NODE_729_length_18429_cov_40.4168 . gene 3536 8147 . - . ID=g69;Name=g69.t1 NODE_729_length_18429_cov_40.4168 . mRNA 3536 8147 . - . ID=g69.t1;Parent=g69;Name=g69.t1 NODE_729_length_18429_cov_40.4168 . five_prime_UTR 8063 8147 . - . ID=g69.t1.utr5p1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 7966 8147 . - . ID=g69.t1.exon1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 7966 8062 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 7545 7699 . - . ID=g69.t1.exon2;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 7545 7699 . - 2 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 7278 7282 . - . ID=g69.t1.exon3;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 7278 7282 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 6915 7011 . - . ID=g69.t1.exon4;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 6915 7011 . - 1 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 6452 6624 . - . ID=g69.t1.exon5;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 6452 6624 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 6030 6132 . - . ID=g69.t1.exon6;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 6030 6132 . - 1 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 5618 5737 . - . ID=g69.t1.exon7;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 5618 5737 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 5033 5129 . - . ID=g69.t1.exon8;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 5033 5129 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 4653 4733 . - . ID=g69.t1.exon9;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 4653 4733 . - 2 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 4317 4384 . - . ID=g69.t1.exon10;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 4317 4384 . - 2 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 4081 4152 . - . ID=g69.t1.exon11;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 4081 4152 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . exon 3536 3806 . - . ID=g69.t1.exon12;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . CDS 3654 3806 . - 0 ID=cds.g69.t1;Parent=g69.t1 NODE_729_length_18429_cov_40.4168 . three_prime_UTR 3536 3653 . - . ID=g69.t1.utr3p1;Parent=g69.t1 #PROT g69.t1 g69 MARIAVLVAVAGCIALAALTVALENGLGRTPPLGWMTWERFRCNVNCTADPTACISEKLIMEMADRMAADGYLEAGYEYVDIDDCWLAPKRDADNKMVADPERFPSGIKKLAAYVHSKGLKLGIYEDFGTMTCAGYPGSENYLKIDAETFASWDVDALKFDGCNSEIKDMTLGYPRMGQFLAESGRKVLYSCSWPDYVRYFSVNSMNLEQVAAYCNIWRVFDDIEDTWASVHSIIKFWGDTQDQLASVARPGAFNDADMLIIGNFGLNEEESKTQMAIWAIIASPMIMSNDLRNISTWARDILLNKEVIAVNQDPLGIQGRRTCVNGTLEVWVRPLKNFDYAVAFYNSGDAAVSGTVDFVSCGIPLTSPTARDLFAKTDIGTLGGNYSVTLPPHGSVILRLTAPAV* # ORIGINAL: g67.t1 original gene structure, not modified by PASA NODE_729_length_18429_cov_40.4168 AUGUSTUS gene 2 288 . + . ID=g67;Name=g67.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS mRNA 2 288 . + . ID=g67.t1;Parent=g67;Name=g67.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 2 288 . + . ID=g67.t1.exon1;Parent=g67.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 2 288 . + 2 ID=cds.g67.t1;Parent=g67.t1 #PROT g67.t1 g67 NDFPLDKAVDLRCLHSISSRAITAIVWIRKHTSVQHTAWQKDIHSVACAERPSVAVDSECGRWQWKLRRSGGRFPAPAGGCTPAPICRHCPSTRL # ORIGINAL: g71.t1 original gene structure, not modified by PASA NODE_729_length_18429_cov_40.4168 AUGUSTUS gene 16328 17065 . + . ID=g71;Name=g71.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS mRNA 16328 17065 . + . ID=g71.t1;Parent=g71;Name=g71.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 16328 17065 . + . ID=g71.t1.exon1;Parent=g71.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 16328 17065 . + 0 ID=cds.g71.t1;Parent=g71.t1 #PROT g71.t1 g71 MASQTPVSFSSLPIEVVVTHVAPLLCNKDLASLTGVNSQLRNGLRLKRMYSLRSAFSKQYWKSAKFRKAVWADIPRERLELDLNGVHSVRGDLSALGGVHSLTLDNCQGVTDVSVLGGVHSLNISYCYGVVDVSALGGVHSLDLSYCHGVLDVSALGGVHSLDLSYCHRVVDVSALGGVHKLDLSYCYGLTDVSALGGVHNLDLSYCYRVTDVSALGGVHSLNLRGCIGVTDVSALSRVHTLWLP* # ORIGINAL: g72.t1 original gene structure, not modified by PASA NODE_729_length_18429_cov_40.4168 AUGUSTUS gene 17443 18363 . - . ID=g72;Name=g72.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS mRNA 17443 18363 . - . ID=g72.t1;Parent=g72;Name=g72.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS exon 17443 18363 . - . ID=g72.t1.exon1;Parent=g72.t1 NODE_729_length_18429_cov_40.4168 AUGUSTUS CDS 17443 18363 . - 0 ID=cds.g72.t1;Parent=g72.t1 #PROT g72.t1 g72 MGASITSATTDASGIPMPLYGEARPLESDAIAMSVTSELLGTHLAYNDAGLYGSCQEEECGPDVCLDTLPSASSSFVVVDAQMDAQKNDGTHLENMRRESVQRPAEEHRDRVSGTVDSVSVDVGGEKRDSDSLSHHASSSHTGVVFNSASRKTSRVDGPPLLSRQASKADMIGDGRRPSNVSLPLHWTEGRGVPGKAEVSLPPHWSEMRRQSKAEITLPPHWSSGLRRGSKADIMVTQTTVPPPLNRSDSRRYVDTSYGSADSDSVVAGVSASGMPSGYGEGSRSTDALVSEGSYDNVFDNSTSEA* # ORIGINAL: g3411.t1 original gene structure, not modified by PASA NODE_920_length_15869_cov_41.5011 AUGUSTUS gene 10031 12915 . + . ID=g3411;Name=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS mRNA 10031 12915 . + . ID=g3411.t1;Parent=g3411;Name=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 10031 10116 . + . ID=g3411.t1.exon1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 10031 10116 . + 0 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 10543 10736 . + . ID=g3411.t1.exon2;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 10543 10736 . + 1 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 10947 11163 . + . ID=g3411.t1.exon3;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 10947 11163 . + 2 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 11444 11515 . + . ID=g3411.t1.exon4;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 11444 11515 . + 1 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 11714 11781 . + . ID=g3411.t1.exon5;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 11714 11781 . + 1 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 11929 11994 . + . ID=g3411.t1.exon6;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 11929 11994 . + 2 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 12357 12462 . + . ID=g3411.t1.exon7;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 12357 12462 . + 2 ID=cds.g3411.t1;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 12759 12915 . + . ID=g3411.t1.exon8;Parent=g3411.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 12759 12915 . + 1 ID=cds.g3411.t1;Parent=g3411.t1 #PROT g3411.t1 g3411 MRIKNAVYQKLTSMINTREDLVSLAEEFSYLKLSETADDALVTIAEEVNMAPCLLARLVLEVYCRRARLAKNAQAASTFSSAGTSAPSADVSDETSAPSPGAAARLGEREGSQSGAPSRSAKKSEAADAGDSDDDAQFSQSTNAVNPKLPEVKKAMQHPETIEDLRLREQVQFCILNDDVYSPLVEKVRHSLGIEYEYILQEKLRAHGIPFIGEDVMRSMGFPKTPDIRLEIPIVVEGCIVNWIESKASFGDEYSHKNYLKDQFWSYHNRYGPGMVIYWFGLIDELDDSRLKGIMLRDAFPRSFSILSGSGIRQAVGMSPN* # ORIGINAL: g3409.t1 original gene structure, not modified by PASA NODE_920_length_15869_cov_41.5011 AUGUSTUS gene 2067 4784 . + . ID=g3409;Name=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS mRNA 2067 4784 . + . ID=g3409.t1;Parent=g3409;Name=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 2067 2180 . + . ID=g3409.t1.exon1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 2067 2180 . + 0 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 2321 2401 . + . ID=g3409.t1.exon2;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 2321 2401 . + 0 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 2498 2636 . + . ID=g3409.t1.exon3;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 2498 2636 . + 0 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 2844 3120 . + . ID=g3409.t1.exon4;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 2844 3120 . + 2 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 3475 3921 . + . ID=g3409.t1.exon5;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 3475 3921 . + 1 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 4160 4331 . + . ID=g3409.t1.exon6;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 4160 4331 . + 1 ID=cds.g3409.t1;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 4539 4784 . + . ID=g3409.t1.exon7;Parent=g3409.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 4539 4784 . + 0 ID=cds.g3409.t1;Parent=g3409.t1 #PROT g3409.t1 g3409 MDALAVSNPSAIALAVVSVAIVSILLSRRKGANYPPCEGGWIPYVGVAVDFGKEPLNYIKRCKDKFGDIFTIYVAGKRMTFLFNPEDFDTFFNKEPIVSFQAAVQPFTKNAAGITVDSFVKCHKDIHDMMKGRLAPSNLGKYVPKLSVEFAKQISDLQNSVGADTSLLHIVRKIIFHSAVTCLFGSDIMKRGDDLFAKFYTYDKDFEYGCQLPEIALRDWAAAKHWLINAFTPVVQGVQQASNKAADSTNNNTNNNNNKSNTPVDGCTDQRDVLASLVEISDASNAPNYALLLLWASQANSIPASFWTLAHMASTPGVWAKAREEALAVVGPLVAKNEPIGEEHIKQLPYIKRCILETVRLRSPGMIPRLCTEAQHVKGYTIPKGDLLMLSPFWVHRNPEKFDRPDEFAPDRWLEAELDKNKFLDGFVGFGGGRFQCPGRWFAIMEMQLFLAMFLCKFGIELQGPVPPPSPLHLVGVQEPHENLRVKIVSA* # PASA_UPDATE: g3412.t1, single gene model update, valid-1, status:[pasa:asmbl_10003,status:12], valid-1 NODE_920_length_15869_cov_41.5011 . gene 13625 15794 . + . ID=g3412;Name=g3412.t1 NODE_920_length_15869_cov_41.5011 . mRNA 13625 15794 . + . ID=g3412.t1;Parent=g3412;Name=g3412.t1 NODE_920_length_15869_cov_41.5011 . five_prime_UTR 13625 13642 . + . ID=g3412.t1.utr5p1;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . exon 13625 13963 . + . ID=g3412.t1.exon1;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . CDS 13643 13963 . + 0 ID=cds.g3412.t1;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . exon 14117 14242 . + . ID=g3412.t1.exon2;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . CDS 14117 14242 . + 0 ID=cds.g3412.t1;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . exon 14793 14936 . + . ID=g3412.t1.exon3;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . CDS 14793 14936 . + 0 ID=cds.g3412.t1;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . exon 15316 15794 . + . ID=g3412.t1.exon4;Parent=g3412.t1 NODE_920_length_15869_cov_41.5011 . CDS 15316 15794 . + 0 ID=cds.g3412.t1;Parent=g3412.t1;3_prime_partial=true #PROT g3412.t1 g3412 MDNDSSPVDSPATMVRRYSASPAAEPVKLEKLLLAAIEQNKTDIDKNFAKICDLYKQVLKAAPQNSEAEEGLARIIHDKVQELLGKLESDKEENQRHSLAELAKHLEEGLFVGEFVSQGGMSVMLEVVTTTSGNTLAVALKALIKTLDYVSAVEYVEQHPQFVVAVAGILDQYKSGRPNVSMHALKFLLFVVAKIGKGYKLVNKALKDSAKRSNVEVFSQVVSLFRECDINDIHIDTLTLLNLMITKAPDAYKRAKLARRLSAMGMAKAVEKKTFNLDEKGNPDLQAQAKEYQKLTAEVIPGSWYENSILKERVEHITEVFRRLEEENRALRGHPSTAASQLVASAGHRRVSEPSV # PASA_UPDATE: g3408.t1, single gene model update, valid-1, status:[pasa:asmbl_10002,status:12], valid-1 NODE_920_length_15869_cov_41.5011 . gene 249 1598 . - . ID=g3408;Name=g3408.t1 NODE_920_length_15869_cov_41.5011 . mRNA 249 1598 . - . ID=g3408.t1;Parent=g3408;Name=g3408.t1 NODE_920_length_15869_cov_41.5011 . five_prime_UTR 1546 1598 . - . ID=g3408.t1.utr5p1;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . exon 1271 1598 . - . ID=g3408.t1.exon1;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . CDS 1271 1545 . - 0 ID=cds.g3408.t1;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . exon 841 955 . - . ID=g3408.t1.exon2;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . CDS 841 955 . - 1 ID=cds.g3408.t1;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . exon 556 638 . - . ID=g3408.t1.exon3;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . CDS 556 638 . - 0 ID=cds.g3408.t1;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . exon 249 321 . - . ID=g3408.t1.exon4;Parent=g3408.t1 NODE_920_length_15869_cov_41.5011 . CDS 249 321 . - 1 ID=cds.g3408.t1;Parent=g3408.t1 #PROT g3408.t1 g3408 MKGFSSARMGCALAVAVCIGVCLSWASVAESSEDALTVDEKVRKLNELTIQKPMMKFDEAAFTKFARTAPRNYSMIVMLTALNSRHQCGPCRFVSNEFSILAESWLRQQRPSKMYFASIDYDNAPGVFQKLDIKSVPVIMHFPARGKPTALDTYQIMQMGFEADNIAKFVVERTGEKVRIT* # ORIGINAL: g3410.t1 original gene structure, not modified by PASA NODE_920_length_15869_cov_41.5011 AUGUSTUS gene 5638 9381 . - . ID=g3410;Name=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS mRNA 5638 9381 . - . ID=g3410.t1;Parent=g3410;Name=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 9373 9381 . - . ID=g3410.t1.exon1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 9373 9381 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 9007 9238 . - . ID=g3410.t1.exon2;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 9007 9238 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 8728 8834 . - . ID=g3410.t1.exon3;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 8728 8834 . - 2 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 8575 8616 . - . ID=g3410.t1.exon4;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 8575 8616 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 8262 8303 . - . ID=g3410.t1.exon5;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 8262 8303 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 7956 8075 . - . ID=g3410.t1.exon6;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 7956 8075 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS exon 5638 7575 . - . ID=g3410.t1.exon7;Parent=g3410.t1 NODE_920_length_15869_cov_41.5011 AUGUSTUS CDS 5638 7575 . - 0 ID=cds.g3410.t1;Parent=g3410.t1 #PROT g3410.t1 g3410 MDEIMQVSTPPGDDGGMDHKVVRVDPVSFMMTPIQSARDCGMDDVSPVAAVPSVCGSVENTPSGLSVSSPTGEVPTSAKKPTAPRKPKLPANERAKEKEERERLMKEKLAEKERLKAEKERERAEKDRVKAEKEKEKAEKDRLKAEKEAEKEKERLEKEKARAEEKALKELQAQQKQEELRKKQEEKEKRQAEKDAQEREKKEKERRELEKAERQRNKLKSFFVVKPASADSAKAPARPEDSTIAATNTDASDCSSVAVAAPSSSSPSSSSATACAPIPVVEVYDVFGPNGRFPPFQIDQGVYVAPYRRVPAKNPSDIDVSLGNFCDGAALNARALFGELKRSGMCRRRAERTSGSMPRKAFAATAANPNPVTAADSSESAVPSGKFKLLQFAENRRPAYFGTWSKTTAAIGGRRPFGKDGQHLDYEVDSDEDWESEGEGENISESDGEGEDVEMPAADDGADCMSEDDGFVVPHGYLSDDEGADADAEACSNASESEDPVTLAEGRRKRKWRATDKAHEAQAMKRLRQMVPKVLGGFGAEAVSVAVQAELASYRACFLFDVGTEDGIVPAVQYYDDEGRDRDQQRAAEKEKEKEKERLRELPRDTLASLARAVHGSSRGIIHLVDEFKAANPDFSKALIDENIRAIAAREKRPAIAPASNLSRWYVRDEVLAQLGLAGIAPKQSPPRERPPKAASTAAAPVVRPTDDQSPGAVVEVQDALQSQSQSQSQSQLQLQSQLQSQSQSQASKRVRHSPSAQKAKRQKTSPSDASAAHGADEPAKKRSSIIRTLFNKVPVKSANATPMQPCTEPEKTKVIDLLQDDVIAVVSQ* # PASA_UPDATE: g13570.t1, single gene model update, valid-1, status:[pasa:asmbl_5514,status:12], valid-1 NODE_3071_length_4403_cov_35.9048 . gene 248 3366 . + . ID=g13570;Name=g13570.t1 NODE_3071_length_4403_cov_35.9048 . mRNA 248 3366 . + . ID=g13570.t1;Parent=g13570;Name=g13570.t1 NODE_3071_length_4403_cov_35.9048 . exon 248 410 . + . ID=g13570.t1.exon1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 248 410 . + 0 ID=cds.g13570.t1;Parent=g13570.t1;5_prime_partial=true NODE_3071_length_4403_cov_35.9048 . exon 722 855 . + . ID=g13570.t1.exon2;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 722 855 . + 2 ID=cds.g13570.t1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . exon 1212 1346 . + . ID=g13570.t1.exon3;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 1212 1346 . + 0 ID=cds.g13570.t1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . exon 1587 1681 . + . ID=g13570.t1.exon4;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 1587 1681 . + 0 ID=cds.g13570.t1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . exon 1933 2801 . + . ID=g13570.t1.exon5;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 1933 2801 . + 1 ID=cds.g13570.t1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . exon 3096 3366 . + . ID=g13570.t1.exon6;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . CDS 3096 3199 . + 2 ID=cds.g13570.t1;Parent=g13570.t1 NODE_3071_length_4403_cov_35.9048 . three_prime_UTR 3200 3366 . + . ID=g13570.t1.utr3p1;Parent=g13570.t1 #PROT g13570.t1 g13570 EELQSAIPQGMAGGNTSNPTFIELKRLMSEYDQLRKARTALYAEVKEKAARDIIEPRLVGVERTDQESIFEDALREYAPLQQKGAESVRQQEILMESIRAANDKFANGRRMSDAGSRREAYIASLDAAFNTYAEIMGNIMEGGKFYGDLAQLLLKFQNKCSDFCFARKTEMKELLGEIQGGITGISPAAAAAAAATATGAAVAVGGLSLADSGAYGPGGAYGPGGATGAGGATVAGALGGDAVPPPRPPRPSPALINAAREVNASTLPPGDYQGQQQQQQDAYGNPNASFNNNTNNNTNNNSNGGPVIPPRPAQRPSNAPPADAQQQQQQQYSQYGIQPPQRDNYGYGAPQGGYSGPQPQQGAYGAPAQGYAPQGGYSGPPPQSYGGAPPAHQGGYAPQGPQGGYGAPPPQTQNYQSGQYGGGYGGGGYGAPPAQQNYYGQPPQPGSYGPPQQQPPQYNAPQGQQQYGNNAYQGYNQPQPGQPPYYGNAPPPQYSQPRY* # ORIGINAL: g2426.t1 original gene structure, not modified by PASA NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS gene 317 1231 . + . ID=g2426;Name=g2426.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS mRNA 317 1231 . + . ID=g2426.t1;Parent=g2426;Name=g2426.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 317 1231 . + . ID=g2426.t1.exon1;Parent=g2426.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 317 1231 . + 0 ID=cds.g2426.t1;Parent=g2426.t1 #PROT g2426.t1 g2426 MFGLKRTTVVQWTEDLVLSVETEGATIDNKALVSCLLCEDFATAEFVADHCSVDWFSVSRAMVLNGSLAALKWLHSLGRLDTTPDILLSWHTCTPEHVDFLWPLARDGRPRMEGYNVAKMVRQQWFDCAIQKGNLAMLRYLCEHLDVVGIYADRPGTNGANVAAEMGFIDITSYMIDVNSRVAPVLESAASRQANAFDLQRRPFDLIDTLKLAVRNGHVRLARLLGRRVPGLRLSLATACASRRWSLFRWALEGLSALETAERQRALEDALLESIRRARIEFVCWFEEMSPTSLSTAAQSSGKC* # ORIGINAL: g2429.t1 original gene structure, not modified by PASA NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS gene 13296 13898 . - . ID=g2429;Name=g2429.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS mRNA 13296 13898 . - . ID=g2429.t1;Parent=g2429;Name=g2429.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 13296 13898 . - . ID=g2429.t1.exon1;Parent=g2429.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 13296 13898 . - 0 ID=cds.g2429.t1;Parent=g2429.t1 #PROT g2429.t1 g2429 MAVHAGVKEAGCWTLWNIGTNADNKVSIAREGGIAVILSAMRMHGGHDHVGIQEAGCGALRSVGLNTDNKVSIAQEGGIAAILLTMRKHGGHVEVQEAGCGALRSIGMNADNMVSIAREGGIAAILSAMRWHGGHAGVQENGCGALWSIGLNADNLVSITREGGIAVILSAMRAHGDHARVQEIGNMVLKVLNAQGSGNR* # ORIGINAL: g2427.t1 original gene structure, not modified by PASA NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS gene 3072 4991 . + . ID=g2427;Name=g2427.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS mRNA 3072 4991 . + . ID=g2427.t1;Parent=g2427;Name=g2427.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 3072 4991 . + . ID=g2427.t1.exon1;Parent=g2427.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 3072 4991 . + 0 ID=cds.g2427.t1;Parent=g2427.t1 #PROT g2427.t1 g2427 MSSQAVNDVSLLLDLSEEVLVHIVKLGCFTITDIGHLRATCKRVCDFLDRISDTVNEYVVGNLSTYTPYWSWTFDSAALNGHLEVIELLHEDEVKRGRVGILCTENATRYASDWGVFMFLVRNRKELLEPEENEYGYFARDWTNLSDEQVQFLLCEAPSFLATDAVRGPIRRGNVDLVSKLLPYVSDAGMVSLLRDTLLGFHKNPALFEFVLAECRKRNVGEREMVVAVLYEVVGRRCDGDLLDVAPRYFKLTPAEWDANDRAYLATYATAAVMSRLREFGLKRTIVVRWIEDLVYSVETDGATIGETAIASCILREDYAAAEFLVDRFGVDWTSVSREVVPTGSPAVLKWLHSRGRLDTSPEILLMPGICTPERVDFLWPLAKDGLPRDPDDYTVAKTVRQNWFDSVIEEDDLAMLRYLCEHLDVVGIYADGPGRNGAEVAAASGFVDIMSYMIDVNSRIAPVTESAAAARPNAFHLQRRPFDLRDALELAVWYGHVCLARLLSRRVPGLRLSLATACASRRWWLFRLALEGLSTMKRVKRRKALTDALLQSIQSGCIKFVCWFEENEPDVFERCRPKFWKTLTQKRNMRFWYEFLSKYPTCIPRTYECSLGGGMWYDIRALVLRLGIKIVTRRMKKL* # ORIGINAL: g2428.t1 original gene structure, not modified by PASA NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS gene 5724 9774 . - . ID=g2428;Name=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS mRNA 5724 9774 . - . ID=g2428.t1;Parent=g2428;Name=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 9730 9774 . - . ID=g2428.t1.exon1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 9730 9774 . - 0 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 8665 9259 . - . ID=g2428.t1.exon2;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 8665 9259 . - 0 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 8176 8582 . - . ID=g2428.t1.exon3;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 8176 8582 . - 2 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 7410 8094 . - . ID=g2428.t1.exon4;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 7410 8094 . - 0 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 7057 7271 . - . ID=g2428.t1.exon5;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 7057 7271 . - 2 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 6853 6967 . - . ID=g2428.t1.exon6;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 6853 6967 . - 0 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 6712 6760 . - . ID=g2428.t1.exon7;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 6712 6760 . - 2 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 6418 6606 . - . ID=g2428.t1.exon8;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 6418 6606 . - 1 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 6213 6346 . - . ID=g2428.t1.exon9;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 6213 6346 . - 1 ID=cds.g2428.t1;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS exon 5724 6115 . - . ID=g2428.t1.exon10;Parent=g2428.t1 NODE_1098_length_14020_cov_20.2341_potentialcontaminant AUGUSTUS CDS 5724 6115 . - 2 ID=cds.g2428.t1;Parent=g2428.t1 #PROT g2428.t1 g2428 MERLATVLLERAHALNGAACDRFTGGCTCAAGWTGANCDISCASGRFGVNCSNTCTCKNEAACDRFTGACTCTAGWTGPNCDITCANDRFGVNCNSTCDCKNGATTCDRFMGLCACTPGWTGAKCDVACVSDRYGANCTQPCICENGAACDRFTGTCTCTAGWTGTMCDVQCHRGQYGPNCALTCPCGDGSCDRFNGTCACTAGSGFYGPSCSTCTCNLGVCDDGLLGNGTCNCTGVLGLGGPNCNTSCNRLAVTPQMYGYGCKTHCACDNGACDPSTGVCTCDFGWTGVACNVIIPPPVPKLNATAELSQYGVGIRLRWFHDDVGPRPWNTTWRYEITREGCFPKVFEVVDALTFLDTDVAINQGYSYYLRAFNSRNVSSATDAIARIRNLQKTEPPSPPYDISSTATLNPDNKQQSMIKFTWKEDISSGPSIKTFIFRDSRLVLEGLMATEYKDFNVEFGKTYVYEIISMNQWGTSNGTRFNETASVGPADSGATAGASSSSNVAGPVAGGVVGAIVGAAGIVLAILFVRKRTSRKKMEALARTELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKVSDFTSTDLLCFCIDIARGMDHLAKCEIVHRDLAARNCMVVAGNRAPNTIENGWKLSPKAQVIVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMEACWRKHAETRPQFSQLVLQLRRGMAVLCGTEGGVGGVGGVGGSKVDDANGTDGLSGAYEHPETYALTVPESAYAETLKPDDEGNLHTLENVMFQKDSNLTTGHSSA* # PASA_UPDATE: g11130.t1, single gene model update, valid-1, status:[pasa:asmbl_7555,status:12], valid-1 NODE_4705_length_1306_cov_34.1137 . gene 72 753 . + . ID=g11130;Name=g11130.t1 NODE_4705_length_1306_cov_34.1137 . mRNA 72 753 . + . ID=g11130.t1;Parent=g11130;Name=g11130.t1 NODE_4705_length_1306_cov_34.1137 . five_prime_UTR 72 73 . + . ID=g11130.t1.utr5p1;Parent=g11130.t1 NODE_4705_length_1306_cov_34.1137 . exon 72 122 . + . ID=g11130.t1.exon1;Parent=g11130.t1 NODE_4705_length_1306_cov_34.1137 . CDS 74 122 . + 0 ID=cds.g11130.t1;Parent=g11130.t1;5_prime_partial=true NODE_4705_length_1306_cov_34.1137 . exon 244 434 . + . ID=g11130.t1.exon2;Parent=g11130.t1 NODE_4705_length_1306_cov_34.1137 . CDS 244 434 . + 2 ID=cds.g11130.t1;Parent=g11130.t1 NODE_4705_length_1306_cov_34.1137 . exon 586 753 . + . ID=g11130.t1.exon3;Parent=g11130.t1 NODE_4705_length_1306_cov_34.1137 . CDS 586 753 . + 0 ID=cds.g11130.t1;Parent=g11130.t1;3_prime_partial=true #PROT g11130.t1 g11130 QAPRLKKEFCVCHLATGDMLRAAVAAGTDVGKKSKKLMEEGKLVSDDIIISLIKENLDQPDCKNGFILDGFPRTVTQAEMLDDMLAERKQKLDRVLEFAIDDSLLVRRITGRLVHPASGRSYHTEFHPPKVDGKDD # PASA_UPDATE: g9337.t1, single gene model update, valid-1, status:[pasa:asmbl_6872,status:12], valid-1 NODE_4028_length_2318_cov_38.3116 . gene 83 1947 . - . ID=g9337;Name=g9337.t1 NODE_4028_length_2318_cov_38.3116 . mRNA 83 1947 . - . ID=g9337.t1;Parent=g9337;Name=g9337.t1 NODE_4028_length_2318_cov_38.3116 . exon 1819 1947 . - . ID=g9337.t1.exon1;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . CDS 1819 1947 . - 0 ID=cds.g9337.t1;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . exon 1340 1442 . - . ID=g9337.t1.exon2;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . CDS 1340 1442 . - 0 ID=cds.g9337.t1;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . exon 769 1004 . - . ID=g9337.t1.exon3;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . CDS 769 1004 . - 2 ID=cds.g9337.t1;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . exon 83 443 . - . ID=g9337.t1.exon4;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . CDS 147 443 . - 0 ID=cds.g9337.t1;Parent=g9337.t1 NODE_4028_length_2318_cov_38.3116 . three_prime_UTR 83 146 . - . ID=g9337.t1.utr3p1;Parent=g9337.t1 #PROT g9337.t1 g9337 MLWAVDMPEANAPLGNLTLVFTDIQDSTLLWETNPIAMKKVLEKHNSVLRRLIRVFNGYEVKTEGDAFMVAFQDTADAIEWCLRAQIDLMEAEWPDEFGNLPSLRSERLPGATAGSRGDLIFNGPRVRMGAHVGQPSCEIDPVTRRMDYFGPTVNKAARIADLAEGGQVVLSKECAVCLEPHMERLSDLKPKLTPLGKFKLKGIDGLETILQIMPARLAGRFFAAYTKKAVKRSSSSPLFSTAAMSVAQFSTNL* # ORIGINAL: g3066.t1 original gene structure, not modified by PASA NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS gene 1 752 . - . ID=g3066;Name=g3066.t1 NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS mRNA 1 752 . - . ID=g3066.t1;Parent=g3066;Name=g3066.t1 NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS exon 356 752 . - . ID=g3066.t1.exon1;Parent=g3066.t1 NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS CDS 356 752 . - 0 ID=cds.g3066.t1;Parent=g3066.t1 NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS exon 1 132 . - . ID=g3066.t1.exon2;Parent=g3066.t1 NODE_5636_length_771_cov_41.3534_potentialcontaminant AUGUSTUS CDS 1 132 . - 2 ID=cds.g3066.t1;Parent=g3066.t1 #PROT g3066.t1 g3066 MIGTARAGLPVCVASFVRKPILPLEFLSTLDSLLAGEPCGDDCLYRGGGGVGGDDDDDTRPMDAEWPSDGVQNDEDYSRPNSACIVPVSARELEATSADMAVSSDCMCGDTSGLSVRYRSSASKGVSILIAEDNLVNQAILKRLIKFVAPSATLEIAANGSIAVDMFAKAFEQGAP # PASA_UPDATE: g14496.t1, single gene model update, valid-1, status:[pasa:asmbl_981,status:3], valid-1 NODE_1258_length_12647_cov_40.0869 . gene 3021 6858 . + . ID=g14496;Name=g14496.t1 NODE_1258_length_12647_cov_40.0869 . mRNA 3021 6858 . + . ID=g14496.t1;Parent=g14496;Name=g14496.t1 NODE_1258_length_12647_cov_40.0869 . five_prime_UTR 3021 3076 . + . ID=g14496.t1.utr5p1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 3021 3442 . + . ID=g14496.t1.exon1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 3077 3442 . + 0 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 3581 3723 . + . ID=g14496.t1.exon2;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 3581 3723 . + 0 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 4021 4168 . + . ID=g14496.t1.exon3;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 4021 4168 . + 1 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 4327 4519 . + . ID=g14496.t1.exon4;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 4327 4519 . + 0 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 4757 4843 . + . ID=g14496.t1.exon5;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 4757 4843 . + 2 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 5124 5405 . + . ID=g14496.t1.exon6;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 5124 5405 . + 2 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 5511 5575 . + . ID=g14496.t1.exon7;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 5511 5575 . + 2 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 5945 6016 . + . ID=g14496.t1.exon8;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 5945 6016 . + 0 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . exon 6363 6858 . + . ID=g14496.t1.exon9;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . CDS 6363 6605 . + 0 ID=cds.g14496.t1;Parent=g14496.t1 NODE_1258_length_12647_cov_40.0869 . three_prime_UTR 6606 6858 . + . ID=g14496.t1.utr3p1;Parent=g14496.t1 #PROT g14496.t1 g14496 MASKHILAACAFLALAAGIVASDALSAQEMFDALPPLTMNDVPKNITQTYRQGDDSICTACKVTASLLTMLLPFVKNHDEIQPGSLCNKIPNIFYDICRPIVDFKGYVGMLERGGVEITCLEAFAGHCSAVCCSNDQPQQLHLSLHPINGRPDLAASWVTLNPTVTSTVKFGTSSGVYTHTFNGACSTYNDTQAPGGWFGTIHEAYLEGLAPLTTYYYKVGDDVGGWSDEFSVTTPSVDGKADEPIALVADMGVPNSEMTVARLIDEVAKGTVKMVLHAGDISYADGRQHLWDHFMQNVQPFAARVPYQVCPGNHERIGDSNLVAYLARFPVPGKAEGRAWFAFDYSFIHFISISTEHATDSSSEQWRWLAEELERSNTEAQRAVTPWLIVYGHRPLYCSNQRPDIDDCNKMAEKFRTDLDELFYKYKVDVYFTGHVHSYERTLPVHNLTAENSYVNPSFPVHVINGAAGNIEMLDVEWYMPKPDWSAVRLSVYGYNKMWANATNMHWQYIQDTDGAVVDEFEIVKTAKTLW* # PASA_UPDATE: g14495.t1, single gene model update, valid-1, status:[pasa:asmbl_980,status:12],[pasa:asmbl_983,status:12], valid-1 NODE_1258_length_12647_cov_40.0869 . gene 252 2187 . + . ID=g14495;Name=g14495.t1 NODE_1258_length_12647_cov_40.0869 . mRNA 252 2187 . + . ID=g14495.t1;Parent=g14495;Name=g14495.t1 NODE_1258_length_12647_cov_40.0869 . five_prime_UTR 252 252 . + . ID=g14495.t1.utr5p1;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . exon 252 399 . + . ID=g14495.t1.exon1;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . CDS 253 399 . + 0 ID=cds.g14495.t1;Parent=g14495.t1;5_prime_partial=true NODE_1258_length_12647_cov_40.0869 . exon 710 979 . + . ID=g14495.t1.exon2;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . CDS 710 979 . + 0 ID=cds.g14495.t1;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . exon 1343 2187 . + . ID=g14495.t1.exon3;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . CDS 1343 1849 . + 0 ID=cds.g14495.t1;Parent=g14495.t1 NODE_1258_length_12647_cov_40.0869 . three_prime_UTR 1850 2187 . + . ID=g14495.t1.utr3p1;Parent=g14495.t1 #PROT g14495.t1 g14495 QEVVELHAIHRISQCAHDVSPDRLRLISYVAYNQGSDRYYCHMFKFQDSAQPIHETIGKAFEEAYNVHKEKEAQKAAASLNVASADQPRERTASASSRPQLTQVDEFSEFQTAPSQQQPQFPPQPQFPQQFSQAPAPAQDDFNSFSRARVQSFSQAPAAQPEQRRTSFVSNAAPVALAPPPSAAPAVNARRMSVQQQFHQQAQQQAQQQAQQSNFGDAPNPFSQPPVAAAPAFNPFTPAPADVNPFAPSVPVATASAPNPFAPPPVMTAQQQQFLQQQQFQQQQMAQYQQFQAQQQASKSGGDLINF* # PASA_UPDATE: g14497.t1, single gene model update, valid-1, status:[pasa:asmbl_979,status:12], valid-1 NODE_1258_length_12647_cov_40.0869 . gene 7365 9509 . - . ID=g14497;Name=g14497.t1 NODE_1258_length_12647_cov_40.0869 . mRNA 7365 9509 . - . ID=g14497.t1;Parent=g14497;Name=g14497.t1 NODE_1258_length_12647_cov_40.0869 . five_prime_UTR 9455 9509 . - . ID=g14497.t1.utr5p1;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . exon 9339 9509 . - . ID=g14497.t1.exon1;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . CDS 9339 9454 . - 0 ID=cds.g14497.t1;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . exon 8895 8962 . - . ID=g14497.t1.exon2;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . CDS 8895 8962 . - 1 ID=cds.g14497.t1;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . exon 7365 8023 . - . ID=g14497.t1.exon3;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . CDS 7845 8023 . - 2 ID=cds.g14497.t1;Parent=g14497.t1 NODE_1258_length_12647_cov_40.0869 . three_prime_UTR 7365 7844 . - . ID=g14497.t1.utr3p1;Parent=g14497.t1 #PROT g14497.t1 g14497 MSLLRMLSSAAVGVYSRASAARAIHSTAATCAGQKYRLSQGLPRSGNEYGPLTDLPDWSYADGRPAPETRARQHRRHFQEAIGSRIEQLLHEVDTAVVKPNATHYIPRGRKTARVWKFSQ* # PASA_UPDATE: g14498.t1, single gene model update, valid-1, status:[pasa:asmbl_982,status:12], valid-1 NODE_1258_length_12647_cov_40.0869 . gene 9746 12552 . + . ID=g14498;Name=g14498.t1 NODE_1258_length_12647_cov_40.0869 . mRNA 9746 12552 . + . ID=g14498.t1;Parent=g14498;Name=g14498.t1 NODE_1258_length_12647_cov_40.0869 . five_prime_UTR 9746 10175 . + . ID=g14498.t1.utr5p1;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . exon 9746 10185 . + . ID=g14498.t1.exon1;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . CDS 10176 10185 . + 0 ID=cds.g14498.t1;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . exon 10319 10354 . + . ID=g14498.t1.exon2;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . CDS 10319 10354 . + 2 ID=cds.g14498.t1;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . exon 10562 12552 . + . ID=g14498.t1.exon3;Parent=g14498.t1 NODE_1258_length_12647_cov_40.0869 . CDS 10562 12552 . + 2 ID=cds.g14498.t1;Parent=g14498.t1;3_prime_partial=true #PROT g14498.t1 g14498 MLSEHAASSNVIGLRSMADMSETQRRQLAQQRASQAQDTVQALRQGEIPSNTQLKQGINTTQEILEEAKQHPSLSKEGRAFLGDVQNVTRDVERIIDTKNPDQRLQSLAEHAKGASQEMTMSDSDVAKILGSGDMTEINTLIMRDGRAIARRLIEDAEFRGHLSEFLVLLRDLGNKKVQRGGGMAGMPLDQGAYNPQRYWSWYDPWGQQQQQQQQQQQQLGTKTSTLGGGYGSTGVGLGSGVGSQAGEKPSTDYYRGLKHGGYYGDVSSVTGGQSYLGQHGYGQHGLEKGSQMPGGVTTGLASTAGSVGGGYESGGRSLAGQQQNQQQQYSSSFDKSGQQSFGQSGQGQQTHGSSYDQLSGQSFDKSKQSLGPSGQTYKQQWGDSFEKSGQQQQSTFGQSGPGQKGQQQQSYGSSYDKQQQQSGQYSSGTQLGGVTAKAGCATSCGVCSPCLDAAVSQRNIEAVAGGATGMAYGAGVDTLVTPSSLQSGVAPSTGIPKMSGMSTGTSGFSHGMSEEYFSEDDKKRLFDRFLALVRKIAEDKESNESSRRLIRLARGLAARSSMSSGNAQRTLDTLKTQGAATQKPAESHAEAMGKDSVLLLERFAGGYKLDTLLKAIGQTIDRASNDQGLTESLNEMRRMLGRCFDHPRLASEAAFSDRLRELFNVMLDRSDAIRSSQE # PASA_UPDATE: g9920.t1, single gene model update, valid-1, status:[pasa:asmbl_6818,status:12], valid-1 NODE_39_length_54653_cov_40.8988 . gene 21467 25382 . - . ID=g9920;Name=g9920.t1 NODE_39_length_54653_cov_40.8988 . mRNA 21467 25382 . - . ID=g9920.t1;Parent=g9920;Name=g9920.t1 NODE_39_length_54653_cov_40.8988 . exon 25257 25382 . - . ID=g9920.t1.exon1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . CDS 25257 25382 . - 0 ID=cds.g9920.t1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . exon 24984 25109 . - . ID=g9920.t1.exon2;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . CDS 24984 25109 . - 0 ID=cds.g9920.t1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . exon 23511 24854 . - . ID=g9920.t1.exon3;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . CDS 23511 24854 . - 0 ID=cds.g9920.t1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . exon 22530 23370 . - . ID=g9920.t1.exon4;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . CDS 22530 23370 . - 0 ID=cds.g9920.t1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . exon 21467 22403 . - . ID=g9920.t1.exon5;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . CDS 21619 22403 . - 2 ID=cds.g9920.t1;Parent=g9920.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 21467 21618 . - . ID=g9920.t1.utr3p1;Parent=g9920.t1 #PROT g9920.t1 g9920 MASGRRLGSAMLLTVALVMCFSAVSVSAISVMSVDLGLEWFKVGIVKPGVPMEIVLNFQSKRKTPAIVSVYNGERLVGDPARAVAVKQPKASFGYLQMLLGQKADSSIVELYRSWFPHYDIVAHESRGTVVFKTPDDNVYSVEELVAMLFDEARKQAEAYGGERIGGAVFTVPAFFGQAERRAVLDAAALAGITVLQLQNDNAAVALNYGVFRRAEFNATAQHILFYDMGAGSTTATLVAYYTGKVKEGKRTDTHPIAEILAVGYDRTLGGIQMEFRLRDHLADLFMKQKNVKNDVRKNSRAMIKLMKEAKRVKEVLSANTETIAQIESLADDIDFKAKVSRTEFEDMCADLFARAAAPVESALRATDIQLSSIQQVILFGGGPRIPKIQTILHQATARTELSKNINSDEAAALGAAFQAAGLSKAFKVKSFIVKDATLFPISVSFERAAQVEDDGTESPAKTVSRTLIQRNNPFPQKKVMTFSRQSGDFDITIEYGDLEFLPENQRALFGAKSIAKVQLSGLAEAIAKHDQDESKGVKVHFNLDANGILHVDSADAVYERPAAIVAAEEAEEAAKKSTLERLGDSISSFFGGTGTDGDVKAEGDEEPGSGEEESVAGEQASEGASKDETREEETREAPKEEAREESTEAPAGDESTPTDESAGEEKPEETKEEKTTADEKGEKEKEEKTEEAKKEDAQDAKKEEKKEEKKEPPKARVQKERLKLAESRLDLPSPSLDEIRAGRTRLEEINRKEDEKHEIERAKNELEAFSYTVRDKLTDAEFERVSTAAERESLLGMVDEATAWLYDAADATAADYRARHQKIRTPWDEIAHRHNELASRPRFLSDFKDMVNVTRTFLATARNISAEDRGQTDDDLEYIEKYLGDSEKWLSEKLEEQSKLEPHETPTLTTRDIGMRIKRIERELSSILRKPKPKPKPKAAPAKNTTTTTDGAKDEKAGADAKAEKDAESAEDAATRDETERDVPTGEGAEGGDAPADDDGADAGSADASEAKGESKQDEKKEETVDAPKKSKSERKPKSEGGKEGKRRPKRKTADTKGSDETLQLDGDKDEL* # PASA_UPDATE: g9914.t1, single gene model update, valid-1, status:[pasa:asmbl_6820,status:3], valid-1 NODE_39_length_54653_cov_40.8988 . gene 4057 8759 . + . ID=g9914;Name=g9914.t1 NODE_39_length_54653_cov_40.8988 . mRNA 4057 8759 . + . ID=g9914.t1;Parent=g9914;Name=g9914.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 4057 4303 . + . ID=g9914.t1.utr5p1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . exon 4057 4387 . + . ID=g9914.t1.exon1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . CDS 4304 4387 . + 0 ID=cds.g9914.t1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . exon 4645 6755 . + . ID=g9914.t1.exon2;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . CDS 4645 6755 . + 0 ID=cds.g9914.t1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . exon 7047 7348 . + . ID=g9914.t1.exon3;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . CDS 7047 7348 . + 1 ID=cds.g9914.t1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . exon 7576 7715 . + . ID=g9914.t1.exon4;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . CDS 7576 7715 . + 2 ID=cds.g9914.t1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . exon 7964 8759 . + . ID=g9914.t1.exon5;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . CDS 7964 8314 . + 0 ID=cds.g9914.t1;Parent=g9914.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 8315 8759 . + . ID=g9914.t1.utr3p1;Parent=g9914.t1 #PROT g9914.t1 g9914 MDPEDKENVFLAVGARSSHGLSRRNSTGILKAGPTTPVKRGALSEVDPNSNDVNPTHEEEPPAKRQRRDSRKSIDRRVSFAPTSQMFYFPPNSNPNSIAEEHSSPAEVMVMTERPADGDNETMEFTSAGHGGILAVNAFTARRFGQASPAAPAAASYTNDENEEDSTMTMEFTSVHGGILEARGQHPTPGPSQVDRDEATMEFTGVHGGIIASRGANVDGEADEGDDAGSTMDFTSVHGGILSSASNNSNNESNDGMEESTMEFTSVHSGILSSARPLEREEEGDTMELTEPVGQIVSSVQIPAQASPSSEAGKLMTVHEEDDNTVTMDLTRVGGRILCLRSPGMKPSPRDIGDLDEEDLRVFDRAQTNASVSHVQQHQQGADDAPTATVMSGDMSGSVGNFTQEFTGTMSMQLSSVSFPAEFDRREDMTTTAQPTPAAHAKAESMPVIVPTFKNDGPSFHAPSDLISFNTPLPARSFVPGSVPHSARRSIDVLAASASVLFSASKPMTAPPTPSAAASSMQQGPRISLSEFLLQAGVSFLDNLSSQRRTTMAVGATQPPADLTSLSERLRIKSVVMPELALMEWGCDNLTETTDTLRANSQILDKQLSAANPAIFAALSSGSNRASLQESLKKLKGHARLETKLKRYEWQCKLESALSEELEDNAAMLKEDAERMRMLDARADQSIRELGSRREWLGREVRRMERFALAPNELVAMAQIAEEARDLESKIRMASLSLDTAKGYASSIAGDVEKAKAEGARLSSSVLETRARISEESREYSPSLVEAAAEECEMTEALAVFSVDGASAGRMRFAFLEGHVSLSVHLDQSAPVGGQGEVPVSHCAFELSPTCDDITRSLFAASGVEQILPACTHSKAIRPVVDAIARRLSRAWVLESEVRALSAQHHVVSISHSGSDCTIAVRLVNAKACVEFEALSTVNPCAYPFGRIASDVHILEGASAPLAQQLLPAFAASIDACSGYARLTSAYARMVSSLP* # PASA_UPDATE: g9921.t1, single gene model update, valid-1, status:[pasa:asmbl_6819,status:3], valid-1 NODE_39_length_54653_cov_40.8988 . gene 25963 27061 . + . ID=g9921;Name=g9921.t1 NODE_39_length_54653_cov_40.8988 . mRNA 25963 27061 . + . ID=g9921.t1;Parent=g9921;Name=g9921.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 25963 26131 . + . ID=g9921.t1.utr5p1;Parent=g9921.t1 NODE_39_length_54653_cov_40.8988 . exon 25963 27061 . + . ID=g9921.t1.exon1;Parent=g9921.t1 NODE_39_length_54653_cov_40.8988 . CDS 26132 26797 . + 0 ID=cds.g9921.t1;Parent=g9921.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 26798 27061 . + . ID=g9921.t1.utr3p1;Parent=g9921.t1 #PROT g9921.t1 g9921 MASDHSDADTLPERVGPYDIVQVVSIVLDSRYAWYLVSRDIAGSREQCFIDSLKGIMLDFDAQVKQIQIKHMYTLDGKPIDKNRYFSTGGKKERSHKMHAWACTAYALFAGLIRRKDPEFFRTPFYQRCMSALGRVAVSALESERRFVAQRKALAPPPDPEQVRPAAPLGRAPTRSGVELQPSDDIDAAIDAAMQELASSGTLKRGADGGSDQTAKRARVQ* # ORIGINAL: g9926.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 37090 44256 . + . ID=g9926;Name=g9926.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 37090 44256 . + . ID=g9926.t1;Parent=g9926;Name=g9926.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 37090 44256 . + . ID=g9926.t1.exon1;Parent=g9926.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 37090 44256 . + 0 ID=cds.g9926.t1;Parent=g9926.t1 #PROT g9926.t1 g9926 MASNAVPSLDRFCAGIASTNPSDVFATLTAVCASLESVLTSSPQAQDDQGTDQREAHHSADGAPPGIYGSPAALMLGEYLESSKDCDDLFEALERQKNQWKFQGLTEAIVDTLRWIISLSGWDSSLRGLGIFLVKKIMAQHARPIYQNLSSDRPRVVKVTLRLLTAMVSQSLASARDVQQTFNFTFKPVEKLPSRRGEGDADDIRTHFVRFALAFFRWEDPHLTKHVLEIKGFIPSIIRGLAADSPHTVSLVLNTLLVRVVRNRALPRKVKVSFFNPSVLEQFAKMYECVSADSVSKSNVNGDPRMDTHAFLVEVCCAPDGGLWFPDPKWTASRAPAPANERGKTRNPILLKFIQALPSANEDLLVQELVLTILTRCPDIVQPYLAAVTLSMEPRLSFRWLANVNMVTKILTRTPQPPFAAKAAPRSAGGILERVVPAVLTRQALTLGLQHASPLVRYTTLGALVTIFAEADKALASAVRASQGAAHAQVPVWDSFFRQFREGLRRRLPDLQTVLARRQHDQPTAAEGVPQAQQLAYARILAVLRGYQKHVPEAFVESRFDYGKLVPPLAVLLSLPAPSQLALAEVLAQAVGFKWQGKAADAAVPASVGKQQPKQQQQQQQQQQQTQQARSVARSHMSALMHLLTTTDVQPVRVALRKFAAAALADTGLFDGSAAVRGEISEWIGALWADDTVISFLDTVIAAAVKDPYPHIDAVSDAFKSAREVDAAASASATSVPFSPLMASALSHAFSGLDAVGNVGTLRPVMDYVRCVLAGIGRTQVSTLPLEALVHSLSVLPSTTTADANAKLRRDSFAGELMSVLGALRAGFSPVPPAEVEKSGSKHAAAIDVQLADIAAGSSVSALDELCVSVGAAPWAVLVPRLAHVAAACNKYASVHAALVRRMSAMNCGSSFLSSPAVEEALHGAVAGDESFGVTTASETMRFLLSLPFSVAFAHCSSVSAIGRPHVVSYLMRTLGNGGGGLASAFHHVLLRLSSLVHKSKHGDCDELNARAINALYALLGEVLSRCATEEGGVDTAAGLMRAYVSNPMVEERFLAGENVADVSGLVTCGSTHLAAELHALLAAAEEQSTTDVAAVLSPLLSRITRAVSGVIERFCATATASTAVETPHKKGKNNAPVVASVASTDADKDASIVALFSVYRSMLSRDDASKMTLDLLALPSSAFGTSQGLSSGWTAWSLLVLMLGRTGDAESSLRPASVRALSAGAPLVLSRDGFEKLTQLMRTCPSPSIDRVVVDILVASSRKGAVSSEDYAVVAQGDVLSFCLTAPTNDLRLRAASMLVRASPLAKHLFEDSLLAADARIAHPLFSTPMRCLDLATAYLEAVGISASHRAAHLPSLSATESAVAVLIADALFDSLVASVTQFDDDDSAIETLLYRLVRAVPARAPRLLSAVTTAAASARKWTGIAARIASFICTCAYEPVRAVDAMDVDGVPHHIEDANIGHLRTLFVSSALDALSRTFTAHADGQIESDAETAVIDAVSASVEHVSPDERNKKMFEDHVTEYVAAAARHRIASPQAISLIRKLLSLEGSSWGRRAALIALDTVTDAKEFEDVLLREDEEDGEINDDMRMQQDDHNDDAAGVSIGMHVTATGGVGDASRRISAKESLVHLLSDLATRYAPECCRAHILPVLLAAYTASLGRCDRLLLRLFAAYEAAGVSVGEDAFVFGPGSLDRRKERKAEFATAKGLSLRGLAHEVVDSIDPQRMAFTSEHLPPSAEMDPAADISSIPAEVARGCYDPGFILPLLSQVMSSNDPPDCRRLLESDCLSVIVASLAVRSESVRAAAYDALGLFYSLVDAARFREKPQIFLLLSAFKNSITIENERVPAVIAAFVCNCVRLLLRPEHFLYATVNKFVLQRPALDLRDVPLFFALFNSSASAGGYKKERGWMLRLLYAGLRDGIDRRVYGRRHVFELLLSFLDSALSHDGGARKAGIRVIHRACAVPTAAEELVRQHGFVAWLHAACTTSQRQGGAAAETFYGALLPTAILLIRTLSQSGAMYLPEEFVWLARTSIDWLCGFSAPDAHIVGSVITLVASVVAFARAHAASHYGPAVSRDSLFGDISVAHVARLIMAWEKAYGPAVASASTDTPKHSDDASIGLHTAGLLIDIVSSVVIPRHADSLASDAPASDSSANTPTTLSCCLAVIEWGAGLISLHSSLGAHRAASFALWCTASFIRDRKLTAWLATHGSHGSAVRALLSLYNAAPAIDSPSTRTQFFSNLNSAFLVLVARAREIGFAAARSAEAASAVDAHTIVQTAMSPAYGRHVAVSPDGAVVSLMTLLPHPTSLHAADGDADPSSTVVSCTCGVCGDSVAAANGMLSLFVRELWSGAPSAALFEGCVDRYARAQSHRAGSDDKCLARLLGRR* # ORIGINAL: g9916.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 14087 14359 . - . ID=g9916;Name=g9916.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 14087 14359 . - . ID=g9916.t1;Parent=g9916;Name=g9916.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 14087 14359 . - . ID=g9916.t1.exon1;Parent=g9916.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 14087 14359 . - 0 ID=cds.g9916.t1;Parent=g9916.t1 #PROT g9916.t1 g9916 MPQGAFDALFEEAVPALTAADRRAWLDSLTGVSLSSDAFFPFRDNIDRAKRTGVSFIAAPSGSVQDAVVVAAADEYGMTFAHTSLRLFHH* # ORIGINAL: g9918.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 18449 19192 . + . ID=g9918;Name=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 18449 19192 . + . ID=g9918.t1;Parent=g9918;Name=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 18449 18567 . + . ID=g9918.t1.exon1;Parent=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 18449 18567 . + 0 ID=cds.g9918.t1;Parent=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 18758 18843 . + . ID=g9918.t1.exon2;Parent=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 18758 18843 . + 1 ID=cds.g9918.t1;Parent=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 19077 19192 . + . ID=g9918.t1.exon3;Parent=g9918.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 19077 19192 . + 2 ID=cds.g9918.t1;Parent=g9918.t1 #PROT g9918.t1 g9918 MCRPTADQLLDHPFVRGGKRKSQVLPALLKALPPLTERSKLECEAIARANNAAGAMRSQVAEAAAAELGDEEPPVFRRSIDELNVHASTTLAKGAAVSSTGSAWVF* # ORIGINAL: g9913.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 75 3608 . - . ID=g9913;Name=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 75 3608 . - . ID=g9913.t1;Parent=g9913;Name=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 3588 3608 . - . ID=g9913.t1.exon1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 3588 3608 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 3424 3496 . - . ID=g9913.t1.exon2;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 3424 3496 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 3092 3223 . - . ID=g9913.t1.exon3;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 3092 3223 . - 2 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 2811 2911 . - . ID=g9913.t1.exon4;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 2811 2911 . - 2 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 2328 2465 . - . ID=g9913.t1.exon5;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 2328 2465 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 1941 2030 . - . ID=g9913.t1.exon6;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 1941 2030 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 954 1733 . - . ID=g9913.t1.exon7;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 954 1733 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 545 643 . - . ID=g9913.t1.exon8;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 545 643 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 75 178 . - . ID=g9913.t1.exon9;Parent=g9913.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 75 178 . - 0 ID=cds.g9913.t1;Parent=g9913.t1 #PROT g9913.t1 g9913 MLANPVSKVSEGHSGPAEEELPIDIYYKKLLEWLVDRKQTGPNWQQQSMAIREKITSAIEDMPEVDEITHLLQGTYINYFHCLRIVELLKVSESSTRNFFGGYSSKRMKDWTEIVRLYEKEGTYLGECANMIQRDVNYEVPALKKQLQKCQQLLKETDRRRLDFAASSKAYAGKFAASCKELGIPGLSIKNELIALIHELPIVYRGIAELSRAEDVRSACRYYDEFVGFLLSASSAGDSSRDPRAAKFVVLETVRRVQNAPEEEEHTLRGRIAVSSAPRVSAGAASQHTQPHAASVPGAPSMDFGDAPVIDFGDAPTIDFGDGDAPKIDFGNTPTIDFGDGDAPKIDFGDGPTIDFGDTPTIDFGGDDAPKIDFGDTPTIDFGGDDAPKIDFGDGIDWGASGEESGIVIESSGAVLAGVAGVDATGAQLLDASEVRNRFMDELMELRGFLAQRIKDVDRSDIITMQQLQRAPAFVQGQSRASIERMKSGVDAVIAAIELPRTQHLMLMKASP # ORIGINAL: g9922.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 27188 31364 . - . ID=g9922;Name=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 27188 31364 . - . ID=g9922.t1;Parent=g9922;Name=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 31092 31364 . - . ID=g9922.t1.exon1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 31092 31364 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 30613 30667 . - . ID=g9922.t1.exon2;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 30613 30667 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 30232 30383 . - . ID=g9922.t1.exon3;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 30232 30383 . - 2 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 30018 30122 . - . ID=g9922.t1.exon4;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 30018 30122 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 29210 29665 . - . ID=g9922.t1.exon5;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 29210 29665 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 28863 29053 . - . ID=g9922.t1.exon6;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 28863 29053 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 28589 28679 . - . ID=g9922.t1.exon7;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 28589 28679 . - 1 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 28312 28471 . - . ID=g9922.t1.exon8;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 28312 28471 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 28029 28114 . - . ID=g9922.t1.exon9;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 28029 28114 . - 2 ID=cds.g9922.t1;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 27188 27880 . - . ID=g9922.t1.exon10;Parent=g9922.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 27188 27880 . - 0 ID=cds.g9922.t1;Parent=g9922.t1 #PROT g9922.t1 g9922 MATVDLTADSGDEDFAVSLALRSASYASIAGASAEVDCKDAVLTADEKARVDEIDLSIEHNERAIRALMEEQDSLASERNAILTAAKKRTTIINTTMLKKDVLVLMPTGGGKSLCYQLPATVSDGITIVISPLLSLMQDQIMQLRSVDVDAVAITSALSKAETNDVYRQMIECKTLKLVYATPERVAKSKTFVSKIEKLYRAGRLSRVVIDEVHCCSQWGHDFRPDYQQLAIFRRHFPDTPIIGLTATATSKVLADVKAILGIARCIEFRSPFNRPNLYYEVRQKPASSETQMEMIAGFILGNFPTSSGIVYCLSRKDAEVASVELHARGVSCVFYHGDMEAGERERAHNMWSTNKARVVVATVAFGMGINKPDVRFVIHQTIAKSIENYYQETGRAGRDGLPAHCLMFFRPADMARQSSIVVSDQRGGMDNLHQMVKFCENFSDCRRALVARYFGETIRPDECNGMCDNCRRRQAGHEVAINRRNIADDAKNLVAMLNSCRENDKRITLQQLVDLWKGTGAKAKALRGDDATVAPSSLSRADCERIVVSLLVNGILKEDFHYTPYSTVCYIVPGPKGRHVPAQVVVQLVPEDTESFISSPIVASNGGRTVGQGKGVDSAVLATLVTCRERIAAAHNTFPHAVISEPEMGTLACLEGAITSDAVTNVVGAARGRKYGADILAALRDARAADTASAPLSGLVGNGKMPNVRAVTGGTAVCIDMDDRDASDDRGADDRGKGKKRRRKIESDDDFM* # ORIGINAL: g9928.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 48775 49791 . + . ID=g9928;Name=g9928.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 48775 49791 . + . ID=g9928.t1;Parent=g9928;Name=g9928.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 48775 49791 . + . ID=g9928.t1.exon1;Parent=g9928.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 48775 49791 . + 0 ID=cds.g9928.t1;Parent=g9928.t1 #PROT g9928.t1 g9928 MGEEDVGEDELTIPHETPSTTGEPAVNALVVFVSATRRESARRFGSSESDVVFKILTYPRSTVAVGDGRDVDVADNEVVGTAERAVVGTAEVSIVTAVKDAVEERTDDVALTEDVAAVLLAVVVVAAVVARVAVAARELVAVPTLVAVAFVDIVKDVIAGVVAATVERLTVVVDAVVDVLVTPVIEPPAATAVVVAVADVFDFTELEEMAEADGAPRKPVVDAVAEPVADEVAEPLAFVVADTPTKPVVADAPTKPVVAVVVEPLVLVGDDTLTTLVTVLAVVAAVTAATAVVADTDDTDDTDDTDDADGTDAVRVVLPSPAATAIPRAASARNASAI* # ORIGINAL: g9929.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 50604 54528 . + . ID=g9929;Name=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 50604 54528 . + . ID=g9929.t1;Parent=g9929;Name=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 50604 50723 . + . ID=g9929.t1.exon1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 50604 50723 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 50885 50981 . + . ID=g9929.t1.exon2;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 50885 50981 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 51155 51267 . + . ID=g9929.t1.exon3;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 51155 51267 . + 2 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 51706 51861 . + . ID=g9929.t1.exon4;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 51706 51861 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 52108 52227 . + . ID=g9929.t1.exon5;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 52108 52227 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 52412 52655 . + . ID=g9929.t1.exon6;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 52412 52655 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 52845 52983 . + . ID=g9929.t1.exon7;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 52845 52983 . + 2 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 53281 53425 . + . ID=g9929.t1.exon8;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 53281 53425 . + 1 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 53693 54136 . + . ID=g9929.t1.exon9;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 53693 54136 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 54418 54528 . + . ID=g9929.t1.exon10;Parent=g9929.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 54418 54528 . + 0 ID=cds.g9929.t1;Parent=g9929.t1 #PROT g9929.t1 g9929 MSMNKPMPFITYDEHLKESGAFILHETACAEIAKIKEPVFVVSVAGLYRTGKSFLLNQLACRSAGFDIGSSVEPCTQGIWMWIVDANQDGTDPSLPTTSKKFKLLLLDTEGLGSYTKNETYDVQIFSLALLLSSMFCYNSLGSIDETALDRLSYPANTLSAALKAFFPAFMWVVRDFSLELNIGGKQVSSREYLENALLPAKGEGQRVLMKNNIRKAITEFFPDRDCFTIKRPVATEEQLQNLANMNPRDFRPEFIKQMQDLKSTILGRVKAKTLYGEKLTGPMIVELARSYVEAINEGAVPTIRTAWENVVQMQCQKAVDTAKQLYTKRMANVIEEEEIPEQDSLEQAHHDASWEAYQLFRHQAVGETVDDFELILRQFIVTSYEKFRDENRKNSERECDRLLHGLVKDISELMSSGQIVTVEHLEEKWDAVVDKFSRVSRGPAKHQVLLSYVKQKPLENARKVASGLVANIKETYEKRIKEEAERAKQQYGTMQEMFNNVNTEWKTARETNSSLSRDNKALEELLKKKEKEERDLSDKVIQLEATLKAERMNTQTLREENQ # ORIGINAL: g9927.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 44631 48716 . - . ID=g9927;Name=g9927.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 44631 48716 . - . ID=g9927.t1;Parent=g9927;Name=g9927.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 44631 48716 . - . ID=g9927.t1.exon1;Parent=g9927.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 44631 48716 . - 0 ID=cds.g9927.t1;Parent=g9927.t1 #PROT g9927.t1 g9927 MFNRRPSIAWALLSCYAASAATSLSDPDFPSANTANVTFVAVPTVTAVMQPSTDADPNDVSLPLEVSLSETATSPTNVTCSLTPSSAAAGYSIAFGKCRVATGDKACPSGAMLYHVDLLPRPATPSITCFAVSDNSTSAFRRQYLTQTSASPELTLSFISRRVLVDGPAERTVNPNDLSLSLRVVLEQDTVGSVTVRCNAYAPADAQPPVAPTSNSTSPVAAIALATVTIANGRSSATVNYTVTALGQPAAIACEAESLVTSGAYQAYRFGTSRGNYTVVALGSVPRASASVSAALFDPNAGGNVVNVTLDEPVQSQTTVTCFPSSAQSRLVFSAVSIGAGASEASVPFSVESAATLLNETAVCGAASIDASSTLVTPQYRVQTSLSLAVAIVVAEAAHVDIGGSAALTVPQNAASLSLPVVLSAPVAVGTKVSVVCRTALDSDDSTAQFSFGDVVLAENATAATVTYFVVRFGAPATIVCVAQSSRANETATEGTFQYLASTSSGRSVELTVSAAPIVNAVGGFIRVQFNASAVYELPVILTEQVSGQPVVVTCAVVSSPTDAGNAVLVFTDALIAINETVGSVPFSVAKPGRSSTVACTAQSVSGGRQYVTATSSGDRVAVGTAPAEVHLLPPNVIVVGTSGTKAQATLGLVGKVAFADAVFLCEIEDPSGSNSTAATVSPTSVVFPVDAGEEDASSSLDEVLTITSTNATDDGAVVVLSCTAEDNGSNFAGQRVSVLVNVVILATFPVTWSAVTKAQPPLFNAAINGDYCGCDITMGACDANCCCDADCSAAMLAVFSGCDTVQLPPFSYRCDAPPTNNRENWSPILCVAVDSNPSLGVIWGAPASVSDAAVFPVYLAAYAPYPYNEQLVHTLPSSLPTGAKYRAGTPLLIATEDENGTFSVAKLKVPVQSILGGPGTCRDGVPVAYLSSVQSACLRDVRTIAAECTGGGIYDAEQFGAFFAIGDSSDALSNIVSTYVAFECGAGADASCENITSGYFGDAAVRFPVAMYNVSTQTCGNAVREVHYVVYWEGSRVLGIVVRIVIGAVHSPVLGKKSGVTGVLQLFSLDYVNLVSYSISPIPVSGHQGYVVGKPLRSGFYESGMSAVNTTLGVSFLRGGASGACVMESWSPLYGVDQVSTCTVSVSRISMTNCDDVRAEMASWLSRFVRSSHVARWGSSFPSEPASWVPIVDGRNATSDASLDGVATCANVPIGIALVVVVGAAGTDAQPQMAVQGATLEYTRGTVVLACPTDDRNACDAINGYVDIALVSTVTFVNVTGNLTQLVVNGDSSTRRKRTPYFQSLRWSIGNFTEDQPLFYPFSEAYSPGLNEHSRDVAFGLALLFLIVMFVAVKTAKPPY* # PASA_UPDATE: g9915.t1, single gene model update, valid-1, status:[pasa:asmbl_6811,status:12], valid-1 NODE_39_length_54653_cov_40.8988 . gene 8863 13163 . - . ID=g9915;Name=g9915.t1 NODE_39_length_54653_cov_40.8988 . mRNA 8863 13163 . - . ID=g9915.t1;Parent=g9915;Name=g9915.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 13138 13163 . - . ID=g9915.t1.utr5p1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 13105 13163 . - . ID=g9915.t1.exon1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 13105 13137 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 12622 12780 . - . ID=g9915.t1.exon2;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 12622 12780 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 12248 12343 . - . ID=g9915.t1.exon3;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 12248 12343 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 11802 11861 . - . ID=g9915.t1.exon4;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 11802 11861 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 11264 11314 . - . ID=g9915.t1.exon5;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 11264 11314 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 10859 10918 . - . ID=g9915.t1.exon6;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 10859 10918 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 10533 10680 . - . ID=g9915.t1.exon7;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 10533 10680 . - 0 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 10215 10326 . - . ID=g9915.t1.exon8;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 10215 10326 . - 2 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 10030 10121 . - . ID=g9915.t1.exon9;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 10030 10121 . - 1 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 9692 9811 . - . ID=g9915.t1.exon10;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 9692 9811 . - 2 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . exon 8863 9436 . - . ID=g9915.t1.exon11;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . CDS 9021 9436 . - 2 ID=cds.g9915.t1;Parent=g9915.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 8863 9020 . - . ID=g9915.t1.utr3p1;Parent=g9915.t1 #PROT g9915.t1 g9915 MADPVLAHKIKAAHAAVAQGLVSEDDPLALMFDSDVYRSNIRTLLDSFPNHFLHTFAIKANPTLSILKIAKESGMGFECASIGELTQALKTGISPERVVFDSPVKSKKELIFALERNVPLNADNFQELAHIDNIVASRAAGALPPIGLRVNPQVGAGSIAALSTGTATSKFGIGLEDYREELLSAYAQRPWLTMIHVHVGSQGVPFDLAIRGIRVIVDAAVEINKRVGKQQIATIDIGGGLSVNFGSDEVKPTFADYQARLRAEVPELFDGSYKCITEFGRSLCAKAGFFLSRIEYNKVSGGRHIAAQHAGADLCVRTVYHPEQWPLRITVLDAHANARDPSEPLVETDVAGPCCFGSDIIAHRRPLPLAQQGDWILVHDVGGYYHSSHTKYNVRQSPAVWGFSAGADSSAQSASHNASSPSGADGIHFQLLQRAETVAETLEVFDRC* # PASA_UPDATE: g9919.t1, single gene model update, valid-1, status:[pasa:asmbl_6813,status:3], valid-1 # PASA_UPDATE: g9919.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6812,status:12],[pasa:asmbl_6817,status:12], valid-1 NODE_39_length_54653_cov_40.8988 . gene 19365 20171 . - . ID=g9919;Name=g9919.t1 NODE_39_length_54653_cov_40.8988 . mRNA 19365 20171 . - . ID=g9919.t1;Parent=g9919;Name=g9919.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 20114 20171 . - . ID=g9919.t1.utr5p1;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 19846 19897 . - . ID=g9919.t1.utr5p2;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . exon 20114 20171 . - . ID=g9919.t1.exon1;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . exon 19365 19897 . - . ID=g9919.t1.exon2;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . CDS 19564 19845 . - 0 ID=cds.g9919.t1;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 19365 19563 . - . ID=g9919.t1.utr3p1;Parent=g9919.t1 NODE_39_length_54653_cov_40.8988 . mRNA 19365 20171 . - . ID=g9919.t1.1.5b6be70b;Parent=g9919;Name=g9919.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 20114 20171 . - . ID=g9919.t1.1.5b6be70b.utr5p1;Parent=g9919.t1.1.5b6be70b NODE_39_length_54653_cov_40.8988 . five_prime_UTR 19846 19900 . - . ID=g9919.t1.1.5b6be70b.utr5p2;Parent=g9919.t1.1.5b6be70b NODE_39_length_54653_cov_40.8988 . exon 20114 20171 . - . ID=g9919.t1.1.5b6be70b.exon1;Parent=g9919.t1.1.5b6be70b NODE_39_length_54653_cov_40.8988 . exon 19365 19900 . - . ID=g9919.t1.1.5b6be70b.exon2;Parent=g9919.t1.1.5b6be70b NODE_39_length_54653_cov_40.8988 . CDS 19564 19845 . - 0 ID=cds.g9919.t1.1.5b6be70b;Parent=g9919.t1.1.5b6be70b NODE_39_length_54653_cov_40.8988 . three_prime_UTR 19365 19563 . - . ID=g9919.t1.1.5b6be70b.utr3p1;Parent=g9919.t1.1.5b6be70b #PROT g9919.t1 g9919 MLSVARIAAASVRRPAARLVVAPVATPSAVMPVRQMSSIQLHHGRPAVATVLDVLKFSVVVSAGVALGSYGALEFSQFLEDSEIFVFEDDDDD* #PROT g9919.t1.1.5b6be70b g9919 MLSVARIAAASVRRPAARLVVAPVATPSAVMPVRQMSSIQLHHGRPAVATVLDVLKFSVVVSAGVALGSYGALEFSQFLEDSEIFVFEDDDDD* # ORIGINAL: g9917.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 14805 18243 . - . ID=g9917;Name=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 14805 18243 . - . ID=g9917.t1;Parent=g9917;Name=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 18222 18243 . - . ID=g9917.t1.exon1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 18222 18243 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 17983 18134 . - . ID=g9917.t1.exon2;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 17983 18134 . - 2 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 17584 17740 . - . ID=g9917.t1.exon3;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 17584 17740 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 17298 17362 . - . ID=g9917.t1.exon4;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 17298 17362 . - 2 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 16811 16976 . - . ID=g9917.t1.exon5;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 16811 16976 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 16449 16534 . - . ID=g9917.t1.exon6;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 16449 16534 . - 2 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 16143 16232 . - . ID=g9917.t1.exon7;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 16143 16232 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 15832 15960 . - . ID=g9917.t1.exon8;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 15832 15960 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 15524 15616 . - . ID=g9917.t1.exon9;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 15524 15616 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 15122 15195 . - . ID=g9917.t1.exon10;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 15122 15195 . - 0 ID=cds.g9917.t1;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 14805 14877 . - . ID=g9917.t1.exon11;Parent=g9917.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 14805 14877 . - 1 ID=cds.g9917.t1;Parent=g9917.t1 #PROT g9917.t1 g9917 MCLDHWNCGVTLLRAGAKNHERVTTVCDPSDYASVVAEVDAAADRLPSLATRQRLALKAFNHTAVYDDAISNYLRQQYAAGQQQLTLRYGMNPHQKPAQVYNVEGDLPIKVLNGSPGFINLLDALNAWQLVKELRSALNLPAAASFKHVSPAGAAVANPLSADQAKLCMVDDLGELSPLATAYARARGADRLSSFGDWIALSDVCDASTARIISREVSDGVIAPGYDDDALAILRKKKDGKYTVLTMDPAYEPPETETRQVYGLRLQQLRNKHPISRAEYGNIVSKNKDLPEGAIRDLIVATIALKFTQSNSVCYARDGQVIGLGAGQQSRIHCTRLAGEKADNWWLRQHPNVLAMKFKKACLDLFIV* # PASA_UPDATE: g9923.t1, single gene model update, valid-1, status:[pasa:asmbl_6814,status:3], valid-1 NODE_39_length_54653_cov_40.8988 . gene 31972 34937 . - . ID=g9923;Name=g9923.t1 NODE_39_length_54653_cov_40.8988 . mRNA 31972 34937 . - . ID=g9923.t1;Parent=g9923;Name=g9923.t1 NODE_39_length_54653_cov_40.8988 . five_prime_UTR 34889 34937 . - . ID=g9923.t1.utr5p1;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . exon 34456 34937 . - . ID=g9923.t1.exon1;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . CDS 34456 34888 . - 0 ID=cds.g9923.t1;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . exon 34210 34342 . - . ID=g9923.t1.exon2;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . CDS 34210 34342 . - 2 ID=cds.g9923.t1;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . exon 31972 34076 . - . ID=g9923.t1.exon3;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . CDS 32051 34076 . - 1 ID=cds.g9923.t1;Parent=g9923.t1 NODE_39_length_54653_cov_40.8988 . three_prime_UTR 31972 32050 . - . ID=g9923.t1.utr3p1;Parent=g9923.t1 #PROT g9923.t1 g9923 MGRPPRKAVKRPAVIDLQSDDDFEPIPVPASRRSGGRTHGSARGRGARVSAGVRKRKKDTNDGDEDDDRTGNGEASTEPEPTEESPEKRRKLGADAVIEDFTKESPGQSDAGLSPSPLNNKSTIGGAMANDSESDDDIVWEVVGGDHDMEVDAAPASQDNAASATVDYTLTTPGVEIKLDFMTKKQKERQRLEREETLRVLGRQRREAFLAVHKAHLVCLVAASLSINRALKDKTVRAVIVSRLPAEAAHESDDRVEVDEIVHSVVDAMRAALRIDSSAVLGDYRAGDASDPSPSPQQHAAPPSIKGKEREIPVNAASSAESHASLEDHPLVQTLCRDFVTGTTSSERFVYACVAASRELGLHTRLVMSPRVAPLRPPVAVRGGNGGDDGDETAFDDIIAGLSSDDGEGEGVRGKKSPNGTLITEREQRDGKTKTKRRSSKAAIVDNNEGGGGGAWASVWMEVLVDHDGHKRWVPVSLPDGDLDNVSACIATATKPVSHVIAVDNDGCVRDVTRRYIPEPSRVRKYRLIDGGVTGKKDDPFSDCAWWRSTLGPLRPKDDELAENEDALLDVSQMTRSLPTALVDYKGHPLYALERHLLKFQAIHPRDVVLGHCRGEPVYPRSNVRDLHTRDAWLKNARVVRDGEMPYKVVKGRQRPSQEGDGDPSAATPKESLLFGEWQTEVYVAAPVVDGIVPKNMHGSVELFRPSMLPRGAVHMRQANIAGLAKRLGIDFAPALVGFEFHAMRSTPLHDGIVVAAENRQLLEDAWREEERERAVRQKAKREASALARWAKLTRSLLTRARLLNKFGSSASTGHEHVFDEGSLRQVEGTGRWTQTCTCGHVRDVDGPASRDGAGVKFSPDEL* # ORIGINAL: g9924.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 35182 36037 . + . ID=g9924;Name=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 35182 36037 . + . ID=g9924.t1;Parent=g9924;Name=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 35182 35200 . + . ID=g9924.t1.exon1;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 35182 35200 . + 0 ID=cds.g9924.t1;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 35288 35408 . + . ID=g9924.t1.exon2;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 35288 35408 . + 2 ID=cds.g9924.t1;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 35586 35739 . + . ID=g9924.t1.exon3;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 35586 35739 . + 1 ID=cds.g9924.t1;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 35960 36037 . + . ID=g9924.t1.exon4;Parent=g9924.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 35960 36037 . + 0 ID=cds.g9924.t1;Parent=g9924.t1 #PROT g9924.t1 g9924 MASKKEEVSLSKRTPFRLPTRKNDLYITRNSEFAAQLDRAQKLLDSGLDEIFIHGLGAAINRAINLALRLQEHYKGTVQVSTNTSTIELVDDIEPTDATQLPGEQRRNNSAVHIRVYRLSAAK* # ORIGINAL: g9925.t1 original gene structure, not modified by PASA NODE_39_length_54653_cov_40.8988 AUGUSTUS gene 36154 36534 . - . ID=g9925;Name=g9925.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS mRNA 36154 36534 . - . ID=g9925.t1;Parent=g9925;Name=g9925.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS exon 36154 36534 . - . ID=g9925.t1.exon1;Parent=g9925.t1 NODE_39_length_54653_cov_40.8988 AUGUSTUS CDS 36154 36534 . - 0 ID=cds.g9925.t1;Parent=g9925.t1 #PROT g9925.t1 g9925 MAPPVNNKSYFASPHPLLLIGVIGGLTALEIVAFQPHLFPYDYLGPIGAGIRYLADNHASALQIGFACAIAAHVAEGLYAYVIAKGAGMSTAAQWGFQTFLFGFPSTILIRKHVRRMQLDTKAKSK* # ORIGINAL: g5239.t1 original gene structure, not modified by PASA NODE_3428_length_3495_cov_36.8117 AUGUSTUS gene 2169 3346 . + . ID=g5239;Name=g5239.t1 NODE_3428_length_3495_cov_36.8117 AUGUSTUS mRNA 2169 3346 . + . ID=g5239.t1;Parent=g5239;Name=g5239.t1 NODE_3428_length_3495_cov_36.8117 AUGUSTUS exon 2169 2225 . + . ID=g5239.t1.exon1;Parent=g5239.t1 NODE_3428_length_3495_cov_36.8117 AUGUSTUS CDS 2169 2225 . + 0 ID=cds.g5239.t1;Parent=g5239.t1 NODE_3428_length_3495_cov_36.8117 AUGUSTUS exon 2504 3346 . + . ID=g5239.t1.exon2;Parent=g5239.t1 NODE_3428_length_3495_cov_36.8117 AUGUSTUS CDS 2504 3346 . + 0 ID=cds.g5239.t1;Parent=g5239.t1 #PROT g5239.t1 g5239 MSSTQGSRSPSRGSGGSGQRTFPSGKTSKPINYEKVIKLLTSRHSSHLIERHAHVLRKIARHNSSGVALANMPFISTIFRVVGERIAAGETECVEPLCALVAVSTTSTQSDKVCDEVQIEGLMVEYVTSIARLAALPHADLQLAAAEALQKYSCGPPRPSSANARLTATTNVGRGSSPDSPSPNSERTNNTARSTTGSEGRRARSGEADPEETYNSHIFQKQRVFNAHVLAESHAASHVVEGVRVSVAKPSLLALLKCLRVLSEDPENCRLLATKEIAGLFCAILADSDAGVKALGYVVE # PASA_UPDATE: g5238.t1, single gene model update, valid-1, status:[pasa:asmbl_6054,status:12],[pasa:asmbl_6055,status:12], valid-1 NODE_3428_length_3495_cov_36.8117 . gene 19 1544 . - . ID=g5238;Name=g5238.t1 NODE_3428_length_3495_cov_36.8117 . mRNA 19 1544 . - . ID=g5238.t1;Parent=g5238;Name=g5238.t1 NODE_3428_length_3495_cov_36.8117 . five_prime_UTR 1376 1544 . - . ID=g5238.t1.utr5p1;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . exon 1146 1544 . - . ID=g5238.t1.exon1;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . CDS 1146 1375 . - 0 ID=cds.g5238.t1;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . exon 883 988 . - . ID=g5238.t1.exon2;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . CDS 883 988 . - 1 ID=cds.g5238.t1;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . exon 260 592 . - . ID=g5238.t1.exon3;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . CDS 260 592 . - 0 ID=cds.g5238.t1;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . exon 19 60 . - . ID=g5238.t1.exon4;Parent=g5238.t1 NODE_3428_length_3495_cov_36.8117 . CDS 19 60 . - 0 ID=cds.g5238.t1;Parent=g5238.t1;3_prime_partial=true #PROT g5238.t1 g5238 MSSFLKGVFDYIVDIAVGSDEGSGVADAKMSQSPVSQSTPRPTQIAALPRLHKPTPAQFKAEFYKRELPCVITGIVSEWESFKCFDVDELKKRWGNLKVEADVSPNDFFPDSDSLRDANGTVAASMSFSEFLDIACPGSIPTTHNDTDASAARDTSHEATRPHLRKAYLQHKALEEFPGLKGMISVPTGFFRADVLQSENVWIGGGGHGGQCHYDTYANFLCQSVVMYLEGWLGRGG # ORIGINAL: g2767.t1 original gene structure, not modified by PASA NODE_5583_length_794_cov_30.7413_potentialcontaminant AUGUSTUS gene 208 324 . - . ID=g2767;Name=g2767.t1 NODE_5583_length_794_cov_30.7413_potentialcontaminant AUGUSTUS mRNA 208 324 . - . ID=g2767.t1;Parent=g2767;Name=g2767.t1 NODE_5583_length_794_cov_30.7413_potentialcontaminant AUGUSTUS exon 208 324 . - . ID=g2767.t1.exon1;Parent=g2767.t1 NODE_5583_length_794_cov_30.7413_potentialcontaminant AUGUSTUS CDS 208 324 . - 0 ID=cds.g2767.t1;Parent=g2767.t1 #PROT g2767.t1 g2767 MFKKKKPDKDALAALQKRLWEAKQAPSEVLDLSELKLIE # ORIGINAL: g4113.t1 original gene structure, not modified by PASA NODE_1852_length_8909_cov_38.8509 AUGUSTUS gene 3389 8775 . + . ID=g4113;Name=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS mRNA 3389 8775 . + . ID=g4113.t1;Parent=g4113;Name=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 3389 3472 . + . ID=g4113.t1.exon1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 3389 3472 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 3850 4016 . + . ID=g4113.t1.exon2;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 3850 4016 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 4228 4366 . + . ID=g4113.t1.exon3;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 4228 4366 . + 1 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 4714 4798 . + . ID=g4113.t1.exon4;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 4714 4798 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 4986 5131 . + . ID=g4113.t1.exon5;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 4986 5131 . + 2 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 5466 6107 . + . ID=g4113.t1.exon6;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 5466 6107 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 6272 6904 . + . ID=g4113.t1.exon7;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 6272 6904 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 7163 7297 . + . ID=g4113.t1.exon8;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 7163 7297 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 7551 7922 . + . ID=g4113.t1.exon9;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 7551 7922 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 8236 8364 . + . ID=g4113.t1.exon10;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 8236 8364 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS exon 8636 8775 . + . ID=g4113.t1.exon11;Parent=g4113.t1 NODE_1852_length_8909_cov_38.8509 AUGUSTUS CDS 8636 8775 . + 0 ID=cds.g4113.t1;Parent=g4113.t1 #PROT g4113.t1 g4113 MGVPAFFRWLSNKYARIIVNAVEEQPREMYTDSNAFSLSFSFAKVNGVTIPINNAAANPMGVEFDNLYLDMNGIIHPCTHPEDRPAPRNEDEMMAIIFEYIDRIFSIIRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAREAQESAEEIDKVRKELELNGIELPPKKTSHFDSNVITPGTEFMDHLAECLKYYVHDRLNNDPGWRGVKVILSDASVPGEGEHKIMEYIRRQRASPGHNPNTRHVLYGADADLIMLGLATHEPYFTILREEFQPNQPKPCTICGQMDHDMYNCQGKAKVKQGEHDQVAAVKSRKEFITIRLHILREYLEKELHMTGLPFQFDIERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVTIYKRLLPKMGGFITDSGEADVHRTQMVLSELGTMEDSIFQSRQERELRNKSHDKRRKIEAQRRREAERDYNNYQPSSNIVVNKESVRESAVALRMAALKKEKELDREANRKAADDLRKKLRSEMRSETALAAADAARMAPDIDTLGGKVEYADAAMPSADGGDAVESEGVVPMSEDVVATGEAPTDGEENAVMKDNDAAVDGGVAVSGGNNDDANDEREAPMKGENGEPDVSAIAPAATNLHSKRKREEEAPPKRNDDDDESEVDDEVRLWEAGWKDRYYESKFNVSSSNGQFVKSVARAYLEGLCWVLAYYYQGCPSWKWFYPFHYAPFASDLNDLGISRVTFERKTRPFKPIEQLMGVFPAASGRFLPPKCIELMTRADSPIIDFYPTEFAIDLNGKKAAWQGVALLPFIDEQRLLAAMHDVYASMSPMELKRNELGDNILHVSVKHPLFESLCKLYESPDKTEAPIDHTLSAGMGGTVLQLEGVCLPGSVYHSPLPHEGMKDIENNQVI # PASA_UPDATE: g4112.t1, single gene model update, valid-1, status:[pasa:asmbl_2808,status:12], valid-1 NODE_1852_length_8909_cov_38.8509 . gene 201 2693 . + . ID=g4112;Name=g4112.t1 NODE_1852_length_8909_cov_38.8509 . mRNA 201 2693 . + . ID=g4112.t1;Parent=g4112;Name=g4112.t1 NODE_1852_length_8909_cov_38.8509 . five_prime_UTR 201 275 . + . ID=g4112.t1.utr5p1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . five_prime_UTR 700 723 . + . ID=g4112.t1.utr5p2;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . exon 201 275 . + . ID=g4112.t1.exon1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . exon 700 807 . + . ID=g4112.t1.exon2;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . CDS 724 807 . + 0 ID=cds.g4112.t1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . exon 913 1009 . + . ID=g4112.t1.exon3;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . CDS 913 1009 . + 0 ID=cds.g4112.t1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . exon 1323 1922 . + . ID=g4112.t1.exon4;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . CDS 1323 1714 . + 2 ID=cds.g4112.t1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . exon 2479 2693 . + . ID=g4112.t1.exon5;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . three_prime_UTR 1715 1922 . + . ID=g4112.t1.utr3p1;Parent=g4112.t1 NODE_1852_length_8909_cov_38.8509 . three_prime_UTR 2479 2693 . + . ID=g4112.t1.utr3p2;Parent=g4112.t1 #PROT g4112.t1 g4112 MPGLVGIVEHTCSVYSPMLKYRDSDGDMITFATEEDVIAWLSMDSNRDLFFALSDDPFAQVQSHLRTVGLDSLAPTPQLLGHVLESIARLVAKIGDIERVIGALVAKGSDVDGALASHTAEIASLRSLHERLADALVHNAPPARPRASSGNGQMAHLAPAVGNPILPSPRMDSAPAVASGAAEYPQPMAL* # ORIGINAL: g8048.t1 original gene structure, not modified by PASA NODE_3370_length_3610_cov_32.8385 AUGUSTUS gene 123 3279 . + . ID=g8048;Name=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS mRNA 123 3279 . + . ID=g8048.t1;Parent=g8048;Name=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 123 255 . + . ID=g8048.t1.exon1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 123 255 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 373 482 . + . ID=g8048.t1.exon2;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 373 482 . + 2 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 583 856 . + . ID=g8048.t1.exon3;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 583 856 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 947 1016 . + . ID=g8048.t1.exon4;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 947 1016 . + 2 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 1115 1259 . + . ID=g8048.t1.exon5;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 1115 1259 . + 1 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 1435 1501 . + . ID=g8048.t1.exon6;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 1435 1501 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 1634 1896 . + . ID=g8048.t1.exon7;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 1634 1896 . + 2 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 2001 2084 . + . ID=g8048.t1.exon8;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 2001 2084 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 2205 2288 . + . ID=g8048.t1.exon9;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 2205 2288 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 2390 2480 . + . ID=g8048.t1.exon10;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 2390 2480 . + 0 ID=cds.g8048.t1;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS exon 2945 3279 . + . ID=g8048.t1.exon11;Parent=g8048.t1 NODE_3370_length_3610_cov_32.8385 AUGUSTUS CDS 2945 3279 . + 2 ID=cds.g8048.t1;Parent=g8048.t1 #PROT g8048.t1 g8048 AKLAPPSTTKPASAEFSQEIDINDVPNRYLLTKGQTHDDIGAATGAAVTTKGRYMTPLDKITASNQGDDRPLYLLVQAKTQEGLDAAIRKIRDLVAVASRPPAPSAGPGGFVHSQPVHAYSQPGPSGPMVTEKVYVSLESMPGFNVKAKIIGPQGSYMKHIERESGARVQLRGRGSGYLEPISGKEAFEAMHLQISHASQAGLDAAKALFNSLLDTVRTEHAAFLQSRTSQPTYAAHPAPYAQPYQQPPYGTQQAHHGQTAQPNPQAPPPPPPGYAPYGAYAASSAGPYGAGPPPPPPSGAPPAHALGPPRLPDGYYPPPPHGVPLPPGGYYPPRQPHYGTAVEGPALPSGVSYVPPPPPPSYQPGHAQGGSQGHPPPPPPTHQPPADGRRRGGNELPPNASITDVDVNAAIRSYGPTRPTEADYNRNTLPDADAVIESQGRNKRGADEDSVEDPDDASDGRSAKRARPDDIDAHATSAGQVHGGTAAAGGSGGAASRPFWAVPVAPSNKGPQATHTGVAVSSGTGAAGTDDEDATAKYERLMEELGIPQK* # PASA_UPDATE: g13227.t1, single gene model update, valid-1, status:[pasa:asmbl_1010,status:3], valid-1 NODE_1265_length_12565_cov_40.785 . gene 5668 10052 . - . ID=g13227;Name=g13227.t1 NODE_1265_length_12565_cov_40.785 . mRNA 5668 10052 . - . ID=g13227.t1;Parent=g13227;Name=g13227.t1 NODE_1265_length_12565_cov_40.785 . five_prime_UTR 10013 10052 . - . ID=g13227.t1.utr5p1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 9799 10052 . - . ID=g13227.t1.exon1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 9799 10012 . - 0 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 9415 9438 . - . ID=g13227.t1.exon2;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 9415 9438 . - 2 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 9150 9249 . - . ID=g13227.t1.exon3;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 9150 9249 . - 2 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 8778 8877 . - . ID=g13227.t1.exon4;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 8778 8877 . - 1 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 8377 8488 . - . ID=g13227.t1.exon5;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 8377 8488 . - 0 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 8003 8128 . - . ID=g13227.t1.exon6;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 8003 8128 . - 2 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 7657 7751 . - . ID=g13227.t1.exon7;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 7657 7751 . - 2 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 7240 7336 . - . ID=g13227.t1.exon8;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 7240 7336 . - 0 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 6942 7045 . - . ID=g13227.t1.exon9;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 6942 7045 . - 2 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 6479 6594 . - . ID=g13227.t1.exon10;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 6479 6594 . - 0 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 6128 6196 . - . ID=g13227.t1.exon11;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 6128 6196 . - 1 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . exon 5668 5949 . - . ID=g13227.t1.exon12;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . CDS 5766 5949 . - 1 ID=cds.g13227.t1;Parent=g13227.t1 NODE_1265_length_12565_cov_40.785 . three_prime_UTR 5668 5765 . - . ID=g13227.t1.utr3p1;Parent=g13227.t1 #PROT g13227.t1 g13227 MADDAAVTKKIEDLTVASSDEDDEVDATAAADGAAPAAGAAKKKKKKNKKKKPAAAANGTANGVANGTAGSGAPTPIIVGGRKQQTNPPTVPIDELFPDHIYPEGEICEYKDDNLKRITNEEKRALDRGQSEIWNEARHAAEVHRHVRKYVKEYIKPGMTMVDICERLEAKVRELIKAKGLEAGHAFPTGCSLNHVAAHYTPNTGDKTVLQYDDVCKIDFGTHINGRIIDCAFTVAFNPKYDNLLKAVKDATNTGIREAGIDVRLCDIGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIAPYRIHAGKTVPIVKGGEATKMEEGEFYAIETFGSTGKGVVHDDLECSHYMKNFDIGHVPLRVAKAKSLLNTINQNFGTLAFCRRWLERVGEEKYLLALKSLCDSGVVNAYPPLVDIKGCYTAQYEHTLVLRPTCKEVLSRGDDF* # PASA_UPDATE: g13225.t1, single gene model update, valid-1, status:[pasa:asmbl_1007,status:12], valid-1 NODE_1265_length_12565_cov_40.785 . gene 1 1198 . - . ID=g13225;Name=g13225.t1 NODE_1265_length_12565_cov_40.785 . mRNA 1 1198 . - . ID=g13225.t1;Parent=g13225;Name=g13225.t1 NODE_1265_length_12565_cov_40.785 . five_prime_UTR 1150 1198 . - . ID=g13225.t1.utr5p1;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . exon 1073 1198 . - . ID=g13225.t1.exon1;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . CDS 1073 1149 . - 0 ID=cds.g13225.t1;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . exon 793 874 . - . ID=g13225.t1.exon2;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . CDS 793 874 . - 1 ID=cds.g13225.t1;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . exon 450 507 . - . ID=g13225.t1.exon3;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . CDS 450 507 . - 0 ID=cds.g13225.t1;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . exon 1 164 . - . ID=g13225.t1.exon4;Parent=g13225.t1 NODE_1265_length_12565_cov_40.785 . CDS 1 164 . - 2 ID=cds.g13225.t1;Parent=g13225.t1;3_prime_partial=true #PROT g13225.t1 g13225 MLLQKSRAILRQSGAGLVLARTMASAPGPATFAKFDYRDAFNIETLLTDEEKMVRDQVRQYCQTKLLPRVTKSFRHETFDREIMNEMGEMGMLGPTIKGYGWVLVLVLVLVLVLVLVLVLVLVLVLV # ORIGINAL: g13228.t1 original gene structure, not modified by PASA NODE_1265_length_12565_cov_40.785 AUGUSTUS gene 10344 11234 . - . ID=g13228;Name=g13228.t1 NODE_1265_length_12565_cov_40.785 AUGUSTUS mRNA 10344 11234 . - . ID=g13228.t1;Parent=g13228;Name=g13228.t1 NODE_1265_length_12565_cov_40.785 AUGUSTUS exon 10344 11234 . - . ID=g13228.t1.exon1;Parent=g13228.t1 NODE_1265_length_12565_cov_40.785 AUGUSTUS CDS 10344 11234 . - 0 ID=cds.g13228.t1;Parent=g13228.t1 #PROT g13228.t1 g13228 MIFVVAAIALAIGSAGLVLSMTSTQAPTGDTKEETAASQENSSEALCILAQLTGLRDKYSDKKAVLEVRRLLGMAHTHPNIAVVGTSADAKQTLIAGVATQFGRDSGGVDSKAVGAAPTRETLCTIRQHLPVRLLMADDLSTFALWNTPDMDSAFHPSETFYNDTGLYAFSHILIVYTEDIGRLANAVAQKALARRDVHPPSLLFVRLNGAAAVRSVTLQNEFATTASAKETVRMETLSSIMAALHSAGVTTIDADDVRRRLFIVSSHVMLDPIKHADEAMDERDLARFLRRAPCS* # PASA_UPDATE: g13226.t1, single gene model update, valid-1, status:[pasa:asmbl_1008,status:3], valid-1 NODE_1265_length_12565_cov_40.785 . gene 2019 4875 . - . ID=g13226;Name=g13226.t1 NODE_1265_length_12565_cov_40.785 . mRNA 2019 4875 . - . ID=g13226.t1;Parent=g13226;Name=g13226.t1 NODE_1265_length_12565_cov_40.785 . five_prime_UTR 4814 4875 . - . ID=g13226.t1.utr5p1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . five_prime_UTR 4542 4542 . - . ID=g13226.t1.utr5p2;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 4814 4875 . - . ID=g13226.t1.exon1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 4425 4542 . - . ID=g13226.t1.exon2;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 4425 4541 . - 0 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 4085 4169 . - . ID=g13226.t1.exon3;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 4085 4169 . - 0 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 3768 3888 . - . ID=g13226.t1.exon4;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 3768 3888 . - 2 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 3401 3508 . - . ID=g13226.t1.exon5;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 3401 3508 . - 1 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 3064 3180 . - . ID=g13226.t1.exon6;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 3064 3180 . - 1 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 2762 2909 . - . ID=g13226.t1.exon7;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 2762 2909 . - 1 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . exon 2019 2484 . - . ID=g13226.t1.exon8;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . CDS 2335 2484 . - 0 ID=cds.g13226.t1;Parent=g13226.t1 NODE_1265_length_12565_cov_40.785 . three_prime_UTR 2019 2334 . - . ID=g13226.t1.utr3p1;Parent=g13226.t1 #PROT g13226.t1 g13226 MAIPAKFADLGKEAKDLFSKDYHFGDVKLELKSTTANGVEFVTGGTKNNKSGAIFGNLESKYKYGAHGITFTERWNTKNVLNTEVTVEDSIAKGLRLNLETSFAPNTGDKAAKVSAGFKQEHFHTTADFDVFNGPVISGNAVVSFEGILAGYEASYNVDSGAVAKSTFALGYKGPDFTLHSNIDSGKVSGSIFHRASSNVLAGAQFAWARGTSETTFAIGGHYTVDKDTFVKAKVDNKAQLGLSYTQVLRKGVKVTLSALVDGKNLNTDSHKLGLSLVLEP* # ORIGINAL: g7521.t1 original gene structure, not modified by PASA NODE_2557_length_5906_cov_58.1777 AUGUSTUS gene 4542 5377 . + . ID=g7521;Name=g7521.t1 NODE_2557_length_5906_cov_58.1777 AUGUSTUS mRNA 4542 5377 . + . ID=g7521.t1;Parent=g7521;Name=g7521.t1 NODE_2557_length_5906_cov_58.1777 AUGUSTUS exon 4542 4907 . + . ID=g7521.t1.exon1;Parent=g7521.t1 NODE_2557_length_5906_cov_58.1777 AUGUSTUS CDS 4542 4907 . + 0 ID=cds.g7521.t1;Parent=g7521.t1 NODE_2557_length_5906_cov_58.1777 AUGUSTUS exon 5171 5377 . + . ID=g7521.t1.exon2;Parent=g7521.t1 NODE_2557_length_5906_cov_58.1777 AUGUSTUS CDS 5171 5377 . + 0 ID=cds.g7521.t1;Parent=g7521.t1 #PROT g7521.t1 g7521 MYSPRIVCLLLLSAATVALVGAQSDDGELPIDLIGPDSEHIGPLRRIAFGSCNKHDLPQPLWDAIIKTSPDVWVWLGDAVYADTRRAMFDWVPSSLEDMRGKFHAQKQQLLYKELVRRVPILGTWDDHDFGLNDGGAEYGNRSESQQIFLDFIDVPVSDRRRSRKGLYSSHVFGPRGSRVQVHSALLTIA* # PASA_UPDATE: g7519.t1, single gene model update, valid-1, status:[pasa:asmbl_4552,status:12], valid-1 NODE_2557_length_5906_cov_58.1777 . gene 181 1986 . + . ID=g7519;Name=g7519.t1 NODE_2557_length_5906_cov_58.1777 . mRNA 181 1986 . + . ID=g7519.t1;Parent=g7519;Name=g7519.t1 NODE_2557_length_5906_cov_58.1777 . five_prime_UTR 181 181 . + . ID=g7519.t1.utr5p1;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . exon 181 319 . + . ID=g7519.t1.exon1;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . CDS 182 319 . + 0 ID=cds.g7519.t1;Parent=g7519.t1;5_prime_partial=true NODE_2557_length_5906_cov_58.1777 . exon 811 911 . + . ID=g7519.t1.exon2;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . CDS 811 911 . + 0 ID=cds.g7519.t1;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . exon 1263 1423 . + . ID=g7519.t1.exon3;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . CDS 1263 1423 . + 1 ID=cds.g7519.t1;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . exon 1678 1986 . + . ID=g7519.t1.exon4;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . CDS 1678 1970 . + 2 ID=cds.g7519.t1;Parent=g7519.t1 NODE_2557_length_5906_cov_58.1777 . three_prime_UTR 1971 1986 . + . ID=g7519.t1.utr3p1;Parent=g7519.t1 #PROT g7519.t1 g7519 VPGHEGNAILSRFPMDNCHIVHLPCHASRFAPHNHVGHKRHGAVVARVKTPLGDVTCCAVHLEAFAGIRGKAAQFRVIEEASRLWNTPLRVIGGDLNTHSCGVARMMPFYACDDLRFGSIGWSEARYWDHHILPGTGFWDPYDKDGDVTMWYYPIYAAKLDWMLLSGPPTTSRASNGTNAPSDAVRKARGKAPWTDSTTHPEHGHVRVVHKAIGGGSASDHQYLLCDVSF* # PASA_UPDATE: g7520.t1, single gene model update, valid-1, status:[pasa:asmbl_4551,status:12], valid-1 NODE_2557_length_5906_cov_58.1777 . gene 2353 3978 . - . ID=g7520;Name=g7520.t1 NODE_2557_length_5906_cov_58.1777 . mRNA 2353 3978 . - . ID=g7520.t1;Parent=g7520;Name=g7520.t1 NODE_2557_length_5906_cov_58.1777 . five_prime_UTR 3948 3978 . - . ID=g7520.t1.utr5p1;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . five_prime_UTR 3624 3638 . - . ID=g7520.t1.utr5p2;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . exon 3948 3978 . - . ID=g7520.t1.exon1;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . exon 3574 3638 . - . ID=g7520.t1.exon2;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . CDS 3574 3623 . - 0 ID=cds.g7520.t1;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . exon 3040 3231 . - . ID=g7520.t1.exon3;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . CDS 3040 3231 . - 1 ID=cds.g7520.t1;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . exon 2353 2529 . - . ID=g7520.t1.exon4;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . CDS 2505 2529 . - 1 ID=cds.g7520.t1;Parent=g7520.t1 NODE_2557_length_5906_cov_58.1777 . three_prime_UTR 2353 2504 . - . ID=g7520.t1.utr3p1;Parent=g7520.t1 #PROT g7520.t1 g7520 MADAAADSLDLYNPRKCAATSRIIGSRDHASVQINVGDVDPQTGRYTGEFKAYPLCGFIRSQGEADDAINRLSQKDGYLHKVFVGAKN* # PASA_UPDATE: g2724.t1, single gene model update, valid-1, status:[pasa:asmbl_9551,status:12], valid-1 NODE_8224_length_381_cov_125.268_potentialcontaminant . gene 8 381 . - . ID=g2724;Name=g2724.t1 NODE_8224_length_381_cov_125.268_potentialcontaminant . mRNA 8 381 . - . ID=g2724.t1;Parent=g2724;Name=g2724.t1 NODE_8224_length_381_cov_125.268_potentialcontaminant . exon 8 381 . - . ID=g2724.t1.exon1;Parent=g2724.t1 NODE_8224_length_381_cov_125.268_potentialcontaminant . CDS 8 381 . - 0 ID=cds.g2724.t1;Parent=g2724.t1;5_prime_partial=true;3_prime_partial=true #PROT g2724.t1 g2724 KTLVHEDPWEVRVAKAWYAPAIARGDLNVLRYLCESVNILRVFSHRGACAAQGADAAVAAGHTDVVVYMMDVNARAVPVRNSALHPKVFHLVKHPFNLSNALETAVRAGRYELVRMIDRRLPGL # ORIGINAL: g3040.t1 original gene structure, not modified by PASA NODE_4614_length_1404_cov_25.0722_potentialcontaminant AUGUSTUS gene 30 509 . + . ID=g3040;Name=g3040.t1 NODE_4614_length_1404_cov_25.0722_potentialcontaminant AUGUSTUS mRNA 30 509 . + . ID=g3040.t1;Parent=g3040;Name=g3040.t1 NODE_4614_length_1404_cov_25.0722_potentialcontaminant AUGUSTUS exon 30 509 . + . ID=g3040.t1.exon1;Parent=g3040.t1 NODE_4614_length_1404_cov_25.0722_potentialcontaminant AUGUSTUS CDS 30 509 . + 0 ID=cds.g3040.t1;Parent=g3040.t1 #PROT g3040.t1 g3040 MNVYNAWNYDEWSLNDGYMASRAFYNQPASDANCEDCAPLTFTSVRDAVFVALDDIILAKETLQSAPIREILFKNMSGFNDDYHCTDADDVDADVLSNKFTGFAKISVVDRDFTCRDLLYGFLECKSSKCDIWYEKFEDVNVTITDGCMELAFSFEHVD* # ORIGINAL: g7135.t1 original gene structure, not modified by PASA NODE_2852_length_4958_cov_73.1989 AUGUSTUS gene 2979 4077 . - . ID=g7135;Name=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS mRNA 2979 4077 . - . ID=g7135.t1;Parent=g7135;Name=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 4062 4077 . - . ID=g7135.t1.exon1;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 4062 4077 . - 0 ID=cds.g7135.t1;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 3716 3842 . - . ID=g7135.t1.exon2;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 3716 3842 . - 2 ID=cds.g7135.t1;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 3516 3592 . - . ID=g7135.t1.exon3;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 3516 3592 . - 1 ID=cds.g7135.t1;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 3187 3342 . - . ID=g7135.t1.exon4;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 3187 3342 . - 2 ID=cds.g7135.t1;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 2979 3049 . - . ID=g7135.t1.exon5;Parent=g7135.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 2979 3049 . - 2 ID=cds.g7135.t1;Parent=g7135.t1 #PROT g7135.t1 g7135 MAPRLAIISVSDKTGVIDFCKRLNAAGYELVASGGTATAIRNAGLAVRDVSELTGAPEMLGGRVKTLHPAVHGGILARNNESDNKDMAERGYSHIDIVVCNLYPFQNTVKATNVTIADAVEQIDIACNNTIHTTRVRAHIVNASPKLI* # ORIGINAL: g7134.t1 original gene structure, not modified by PASA NODE_2852_length_4958_cov_73.1989 AUGUSTUS gene 269 2902 . + . ID=g7134;Name=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS mRNA 269 2902 . + . ID=g7134.t1;Parent=g7134;Name=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 269 335 . + . ID=g7134.t1.exon1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 269 335 . + 1 ID=cds.g7134.t1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 709 822 . + . ID=g7134.t1.exon2;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 709 822 . + 0 ID=cds.g7134.t1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 1156 1364 . + . ID=g7134.t1.exon3;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 1156 1364 . + 0 ID=cds.g7134.t1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 1663 1812 . + . ID=g7134.t1.exon4;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 1663 1812 . + 1 ID=cds.g7134.t1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 2258 2391 . + . ID=g7134.t1.exon5;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 2258 2391 . + 1 ID=cds.g7134.t1;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS exon 2658 2902 . + . ID=g7134.t1.exon6;Parent=g7134.t1 NODE_2852_length_4958_cov_73.1989 AUGUSTUS CDS 2658 2902 . + 2 ID=cds.g7134.t1;Parent=g7134.t1 #PROT g7134.t1 g7134 LYMATGFNGNEASYAAGAGKVLAQWIAEGIAPFDVWPVDIRRFHPDCLNPKSVPSAWDSWVVPRAHEAYKLRYALGFPNVEPSGGATVRVSEVYHLLKEQGGVFGGKAGWARPNLFNPPNSPAAEHKAVRESVGVFDQSSFHKVFVEGKGVGELMSYLCSNDVRKVGGTIYTQMLNDRGGIETDIVVNRIAEDKYYVVMGTAYGVHDVDWIESNIPKGSDVKIRDVTREYATIALMGPRARDVLSKVTKNDVSNDAFPFMTHQTLKIGGVDVLALRMTFVGELGWELHPPMSSSQAVYKNLMEGQ* # ORIGINAL: g12967.t1 original gene structure, not modified by PASA NODE_3167_length_4133_cov_39.6498 AUGUSTUS gene 175 3887 . + . ID=g12967;Name=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS mRNA 175 3887 . + . ID=g12967.t1;Parent=g12967;Name=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 175 233 . + . ID=g12967.t1.exon1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 175 233 . + 2 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 711 783 . + . ID=g12967.t1.exon2;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 711 783 . + 0 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 1129 1263 . + . ID=g12967.t1.exon3;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 1129 1263 . + 2 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 1530 1633 . + . ID=g12967.t1.exon4;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 1530 1633 . + 2 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 1981 2133 . + . ID=g12967.t1.exon5;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 1981 2133 . + 0 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 2292 2406 . + . ID=g12967.t1.exon6;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 2292 2406 . + 0 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 2752 2843 . + . ID=g12967.t1.exon7;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 2752 2843 . + 2 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 3127 3204 . + . ID=g12967.t1.exon8;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 3127 3204 . + 0 ID=cds.g12967.t1;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS exon 3765 3887 . + . ID=g12967.t1.exon9;Parent=g12967.t1 NODE_3167_length_4133_cov_39.6498 AUGUSTUS CDS 3765 3887 . + 0 ID=cds.g12967.t1;Parent=g12967.t1 #PROT g12967.t1 g12967 WVRDGARERMRRRNLEKEWSQSKYGWVRKAWDSAEGWVIVFVVGVGAAFLAAFITVNTLWLSDIKLGACTSAFWLSREFCCWTAEAAPGSDHCEYWQKWSEMLSAPGDKSAYTSNYFFYVFFSIIFAFLSATLVRAFAPYAAGSGIPEIKTILGGFVIRRYLGLWTMIVKTMGVVLSTASGLSVGKEGPLVHVVCCWGNVVSRVFSKYRRNEAKRREILSAAAAAGITVAFGAPVGGVLFSLEEVSYYFPFKTMWRSFFCALTAAATLQYLNPLRTGRLVLFHVAYDRPWHWFELFPFIALGVFGVGMD* # PASA_UPDATE: g13266.t1, single gene model update, valid-1, status:[pasa:asmbl_518,status:12],[pasa:asmbl_520,status:12], valid-1 NODE_1138_length_13631_cov_40.8654 . gene 10154 10860 . - . ID=g13266;Name=g13266.t1 NODE_1138_length_13631_cov_40.8654 . mRNA 10154 10860 . - . ID=g13266.t1;Parent=g13266;Name=g13266.t1 NODE_1138_length_13631_cov_40.8654 . five_prime_UTR 10679 10860 . - . ID=g13266.t1.utr5p1;Parent=g13266.t1 NODE_1138_length_13631_cov_40.8654 . exon 10568 10860 . - . ID=g13266.t1.exon1;Parent=g13266.t1 NODE_1138_length_13631_cov_40.8654 . CDS 10568 10678 . - 0 ID=cds.g13266.t1;Parent=g13266.t1 NODE_1138_length_13631_cov_40.8654 . exon 10154 10455 . - . ID=g13266.t1.exon2;Parent=g13266.t1 NODE_1138_length_13631_cov_40.8654 . CDS 10324 10455 . - 0 ID=cds.g13266.t1;Parent=g13266.t1 NODE_1138_length_13631_cov_40.8654 . three_prime_UTR 10154 10323 . - . ID=g13266.t1.utr3p1;Parent=g13266.t1 #PROT g13266.t1 g13266 MARIVTRDELSKHATFADGIWMVIAGKVYDLTKFFKEHPGGEDVLLEHAGEDATNAFEDVGHSRTARDLLDDFYVGDFQK* # PASA_UPDATE: g13264.t1, single gene model update, valid-1, status:[pasa:asmbl_517,status:3], valid-1 NODE_1138_length_13631_cov_40.8654 . gene 3592 7948 . - . ID=g13264;Name=g13264.t1 NODE_1138_length_13631_cov_40.8654 . mRNA 3592 7948 . - . ID=g13264.t1;Parent=g13264;Name=g13264.t1 NODE_1138_length_13631_cov_40.8654 . five_prime_UTR 7498 7948 . - . ID=g13264.t1.utr5p1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . exon 7369 7948 . - . ID=g13264.t1.exon1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . CDS 7369 7497 . - 0 ID=cds.g13264.t1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . exon 6944 7099 . - . ID=g13264.t1.exon2;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . CDS 6944 7099 . - 0 ID=cds.g13264.t1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . exon 5046 6709 . - . ID=g13264.t1.exon3;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . CDS 5046 6709 . - 0 ID=cds.g13264.t1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . exon 4434 4834 . - . ID=g13264.t1.exon4;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . CDS 4434 4834 . - 1 ID=cds.g13264.t1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . exon 3592 3973 . - . ID=g13264.t1.exon5;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . CDS 3765 3973 . - 2 ID=cds.g13264.t1;Parent=g13264.t1 NODE_1138_length_13631_cov_40.8654 . three_prime_UTR 3592 3764 . - . ID=g13264.t1.utr3p1;Parent=g13264.t1 #PROT g13264.t1 g13264 MSAAAGGGAITPSSLGDKSVGDRDLAAKAKERFDARDFDGSIQILRQLLKAREGDAKVAHNIAVVEYYKSQCSATEEFLASLAKISWNGSMEGESNGDVGGDEIESSVAMYNQAVILIQTRQHLGAIAILEQLYRRIEPIEETLARKICFVLLDLYLSRGDADKAGFVMAYLEKTLNAAAAAAGGKGGAQSASAETGGQTQTAKDGSSKESKEQSDASVRQMKLQLHVYKARFHLLTRSIKACKREIKSALNASSQNPTALFLKSNFEYCRQNYRKSVKLLNSCVPRASDPQQQQPSPAVAAQLQRDWHAVAAMYFNDLGAVHHQMRRHAMASYYFGRALKENLLVYQGSAVSTDGQRRNLSTLARDRRYELHVNSGVQRLLTGDAHGAYASLHASLPVFSGNPRVWLRIGEACIAVYVDESSCQKRAVVAGEAASQGTGSSLALDARLYAVAGEEGRRVIAASALAFDANAGAGDRTSSEAAADGSSSTYVNGTAQAGGSAGVAPTPSLLYAEWCLLTGLAVLAHHCNAPKQSASQQLQSVSGSGQQQQGEKETGAHGAQNGSTHTGNGHVGTNTPHAPATPTPAFEPPITCPGQCGSGGMVRPGEFVSLRCALLTALSFVQLSLEDYGAALVSANAVTAEDGCPGQLGFLSKLYAAEALVQLGRVQEAAARLEQLRPEDADSMLDHLRQEQMQQQTATADSVSRSHTVVWRDDALLTVRPRTQLPTAGVALLVNLAAAMAAKGDLDQARACIRRVAVTCEAVGAPVPPHAIVMSAYIDIRRGDRVGALESIRNYRLSSSGASAQAPPPTATTTTATTAPAAAAHVTTSASVVSGGASHAARGGNGRGNTR* # ORIGINAL: g13267.t1 original gene structure, not modified by PASA NODE_1138_length_13631_cov_40.8654 AUGUSTUS gene 12247 12979 . - . ID=g13267;Name=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS mRNA 12247 12979 . - . ID=g13267.t1;Parent=g13267;Name=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 12801 12979 . - . ID=g13267.t1.exon1;Parent=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 12801 12979 . - 0 ID=cds.g13267.t1;Parent=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 12462 12577 . - . ID=g13267.t1.exon2;Parent=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 12462 12577 . - 1 ID=cds.g13267.t1;Parent=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 12247 12308 . - . ID=g13267.t1.exon3;Parent=g13267.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 12247 12308 . - 2 ID=cds.g13267.t1;Parent=g13267.t1 #PROT g13267.t1 g13267 MAASDSSDSSFDDISPTHVVEFFYDMRFLHVQCDHIGCEKIVKLGSLRKHRLAFHIGTLKMEAANPLAASTGCPQSAIDVTVDWDAREWEWLIEGANWAVKNRMTTALEERSKTGEAL* # ORIGINAL: g13263.t1 original gene structure, not modified by PASA NODE_1138_length_13631_cov_40.8654 AUGUSTUS gene 325 3404 . + . ID=g13263;Name=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS mRNA 325 3404 . + . ID=g13263.t1;Parent=g13263;Name=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 325 489 . + . ID=g13263.t1.exon1;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 325 489 . + 1 ID=cds.g13263.t1;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 860 992 . + . ID=g13263.t1.exon2;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 860 992 . + 1 ID=cds.g13263.t1;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 1184 2771 . + . ID=g13263.t1.exon3;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 1184 2771 . + 0 ID=cds.g13263.t1;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS exon 2983 3404 . + . ID=g13263.t1.exon4;Parent=g13263.t1 NODE_1138_length_13631_cov_40.8654 AUGUSTUS CDS 2983 3404 . + 2 ID=cds.g13263.t1;Parent=g13263.t1 #PROT g13263.t1 g13263 NHAEVTQLLLQYQADVNIRDNDGNTPLHVCSSNGHVECAKLLVAAKCDINAANDRGMTPLHNASKWGYIWIVGLLMKHGALIARNKKNETPIQCAQNKKVADRINELLQQDLHAHSGFSSPRAGVGGSGSGSGSGGSGGMNADGSPGMARTASGIVAMGSRDASGGPSMNNSDSDSEDLQDIERLTPAPPPLSSREPNPEELEREREIKSMFVAIEEGDIELVKFKLRATRAIARVPASAGPSSGVSSPATGRSRSNSSSSTTNNNDSNNGGDGVCHPLCQCPKCQKVEDQPGGGGLLPTDRDDKTRTPLHAAAQHGHADIVQLLLEVGAEPNARTSGGQAALHYACQYNHAEVAEMLLARRSKTNARDNAGNTPLHMCSANGHVRCAQLLLSHGANPNIANKRGDTPLHNASRWDYGDIVRILIVGGARIDSLNAREQTPLQCAKSEELVATMHEAVRQRAEAVDAARALRAREEAEGSRKRTMSSILREQQERDHDALPKAGKVGVMSYGLLAPPSPRPQQRGSAGVSTGANAPSMHGSQLHIPSFVANASQSGPESQRGETIASGGGGGGGGGVSGAVGGIGVTVPGGASQALNRPPGITDIFAALERDDVTRRLQLKSAISQFTAESLKKPRLKRDRSAPNIDLRLKLTLSINKFDKSARLRQTAPPFPNGDSGSPSDAMRQFARVESLSRRQHTLSTSTLESAEEGDEEDPDDDTGSYGGDGIMENAPPQAPASEQLGVGSEERVRSSSNAPDLELRSLAHRN* # PASA_UPDATE: g13265.t1, single gene model update, valid-1, status:[pasa:asmbl_516,status:12], valid-1 NODE_1138_length_13631_cov_40.8654 . gene 8372 10048 . + . ID=g13265;Name=g13265.t1 NODE_1138_length_13631_cov_40.8654 . mRNA 8372 10048 . + . ID=g13265.t1;Parent=g13265;Name=g13265.t1 NODE_1138_length_13631_cov_40.8654 . five_prime_UTR 8372 8430 . + . ID=g13265.t1.utr5p1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . exon 8372 8527 . + . ID=g13265.t1.exon1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . CDS 8431 8527 . + 0 ID=cds.g13265.t1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . exon 8724 8879 . + . ID=g13265.t1.exon2;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . CDS 8724 8879 . + 2 ID=cds.g13265.t1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . exon 9029 9160 . + . ID=g13265.t1.exon3;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . CDS 9029 9160 . + 2 ID=cds.g13265.t1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . exon 9701 10048 . + . ID=g13265.t1.exon4;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . CDS 9701 9795 . + 2 ID=cds.g13265.t1;Parent=g13265.t1 NODE_1138_length_13631_cov_40.8654 . three_prime_UTR 9796 10048 . + . ID=g13265.t1.utr3p1;Parent=g13265.t1 #PROT g13265.t1 g13265 MLAIARQSAVLRAAPTHGSALVSLVRRCYASVAAPAGLRYSKSHEWISISNGVGKVGISDYAANSLGDVVFVDLPAPGTKVEQEGTSGAVESVKAVSDVYSPVAGEIVEANEELRSQPALINSSPYEKGWLFKIKLSEPKQAEELMDAAAYAKYCLSAH* # PASA_UPDATE: g5622.t1, single gene model update, valid-1, status:[pasa:asmbl_4750,status:12], valid-1 NODE_2664_length_5517_cov_70.1112 . gene 84 5284 . + . ID=g5622;Name=g5622.t1 NODE_2664_length_5517_cov_70.1112 . mRNA 84 5284 . + . ID=g5622.t1;Parent=g5622;Name=g5622.t1 NODE_2664_length_5517_cov_70.1112 . five_prime_UTR 84 84 . + . ID=g5622.t1.utr5p1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 84 166 . + . ID=g5622.t1.exon1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 85 166 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 427 560 . + . ID=g5622.t1.exon2;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 427 560 . + 2 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 840 1037 . + . ID=g5622.t1.exon3;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 840 1037 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 1194 1284 . + . ID=g5622.t1.exon4;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 1194 1284 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 1509 1578 . + . ID=g5622.t1.exon5;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 1509 1578 . + 2 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 1768 1894 . + . ID=g5622.t1.exon6;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 1768 1894 . + 1 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 2087 2251 . + . ID=g5622.t1.exon7;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 2087 2251 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 2558 2626 . + . ID=g5622.t1.exon8;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 2558 2626 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 2844 2977 . + . ID=g5622.t1.exon9;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 2844 2977 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 3291 3417 . + . ID=g5622.t1.exon10;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 3291 3417 . + 1 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 3628 3762 . + . ID=g5622.t1.exon11;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 3628 3762 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 3929 3995 . + . ID=g5622.t1.exon12;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 3929 3995 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 4199 4301 . + . ID=g5622.t1.exon13;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 4199 4301 . + 2 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 4586 4703 . + . ID=g5622.t1.exon14;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 4586 4703 . + 1 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 4909 5037 . + . ID=g5622.t1.exon15;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 4909 5037 . + 0 ID=cds.g5622.t1;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . exon 5204 5284 . + . ID=g5622.t1.exon16;Parent=g5622.t1 NODE_2664_length_5517_cov_70.1112 . CDS 5204 5284 . + 0 ID=cds.g5622.t1;Parent=g5622.t1;3_prime_partial=true #PROT g5622.t1 g5622 MSDLEGYINARQSKDIEGADEKIAALAARLPDITHPREHLKKVHDARDAKIVKLLEACVSAETPVEDLRTTRLDIIKRLGPKHSSVDTMKDLVDRASITICTRETLLALIRLVQEATAASGKAAQELPSADKIADLIVDIARVHPERFHVASTFEELVGLLGSDSPFLVELSLQLFGLVGTNVQDIAPGLAKALSKELGAFAVSGTQAQAKYAMRAIATVYPATKAKIFDEIMSDVVPKLKSPANQPSALAPLVAAAGHVALLAPEVLGKYKEKLITRFAIEDALRKPKVDDKAKRSNSDWLQKISPECELKLAVVKLLRRYVEGVKQDTADTAHVTEILVSILESDGDISEKKSLPLAERSRLRLGAATSLLKLAGALHSRNAHLSPSHFQTLAMIVQDSVPEIRHTIIDKVFEQLMKGKLPLQYVCMLTLAATSDDKETVTTARRHLTTHTKTRRQALERRGVKNAAVSALPEYAMVYLIHLLAHHPDFSPANLRDFQKYIKFFLDTLADKSEHFLFLHQVVLTIKQTVDAREPPKSENIYTLCDLALAVIQHKAQTSQWALKEYPGEIVLPASLYANPETPVRHKGSYLPANFAIEGGGTAASPISR # PASA_UPDATE: g3747.t1, single gene model update, valid-1, status:[pasa:asmbl_7903,status:3], valid-1 NODE_515_length_21984_cov_42.1532 . gene 11914 14737 . - . ID=g3747;Name=g3747.t1 NODE_515_length_21984_cov_42.1532 . mRNA 11914 14737 . - . ID=g3747.t1;Parent=g3747;Name=g3747.t1 NODE_515_length_21984_cov_42.1532 . five_prime_UTR 14685 14737 . - . ID=g3747.t1.utr5p1;Parent=g3747.t1 NODE_515_length_21984_cov_42.1532 . exon 14152 14737 . - . ID=g3747.t1.exon1;Parent=g3747.t1 NODE_515_length_21984_cov_42.1532 . CDS 14152 14684 . - 0 ID=cds.g3747.t1;Parent=g3747.t1 NODE_515_length_21984_cov_42.1532 . exon 11914 13997 . - . ID=g3747.t1.exon2;Parent=g3747.t1 NODE_515_length_21984_cov_42.1532 . CDS 12230 13997 . - 1 ID=cds.g3747.t1;Parent=g3747.t1 NODE_515_length_21984_cov_42.1532 . three_prime_UTR 11914 12229 . - . ID=g3747.t1.utr3p1;Parent=g3747.t1 #PROT g3747.t1 g3747 MDEEMENSIDPAYECDAPMFFDFSKTEDASTDCNDGADEWFERREAAGIIQDGPIQDPHPLLEESIEDINEEDEEKNAANDNNSNHTTNTDTDTAEATMCHSASTDAASVCTALLGATITPVEEIQTVADAKAAEVVTNAVAPVVDCAPVVEVAAPVNMVTSWACAGSKSAFLAASAKPAAPATRKRRSTSPAAPSRSSPKRAKTDAIAVPSSLTRPTASSAARAQKAPAPTGITAAHKPTPKPAVRRSIRVAPAAPSVAPSYAVRPPVKSTEDMELERIENARLQMAKVRRAAAQKLTDAKKRSPQEPFSFHSDARIRSRSSSRTSSRASSPCESPSPRAPSRAMSERSAPQTPKRLLASAPKISRPQSERIRRAVGAPNLRTAARSRPTAVLSKEERDRLEILAMPKFRAAPVNHRVIDSHGDVGVPRVPKRGVTKAHTPKFASDKRVVARRDLSAKPEPQPALFKAQPLPAAILDHVVGVPDKHELPVTVPESPALLTRKRAMSEQPMDGSALDLAVVGAPLVIRSCTPISADAPIVLPPKIAIPVTMPEPFHFDEAVEQKKEERRRQAEEERRRTEAAVREFHARPMPDGSPDQLPVRPARPTTTIEPFNLLSEKRHIDYVSELANKLAVQLAEEESRFSSFRAQPLPESAPFIPAKSTLPLTEAAPFNLETEVRVEHRHEFDAKQKERLAMEDAERARQEEARLAEEQMVVAELRKQTVHRPEPIRRYRTTDIMPSDKKLTDPHSPAIGDKRARKQGQMRA* # PASA_UPDATE: g3746.t1, single gene model update, valid-1, status:[pasa:asmbl_7898,status:3], valid-1 # PASA_UPDATE: g3746.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7899,status:3], valid-1 NODE_515_length_21984_cov_42.1532 . gene 4115 7240 . + . ID=g3746;Name=g3746.t1 NODE_515_length_21984_cov_42.1532 . mRNA 4115 7240 . + . ID=g3746.t1;Parent=g3746;Name=g3746.t1 NODE_515_length_21984_cov_42.1532 . five_prime_UTR 4115 4163 . + . ID=g3746.t1.utr5p1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 4115 4304 . + . ID=g3746.t1.exon1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 4164 4304 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 4688 4825 . + . ID=g3746.t1.exon2;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 4688 4825 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 5155 5220 . + . ID=g3746.t1.exon3;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 5155 5220 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 5535 5624 . + . ID=g3746.t1.exon4;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 5535 5624 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 5951 6069 . + . ID=g3746.t1.exon5;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 5951 6069 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 6224 6263 . + . ID=g3746.t1.exon6;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 6224 6263 . + 1 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 6647 6718 . + . ID=g3746.t1.exon7;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 6647 6718 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . exon 6916 7240 . + . ID=g3746.t1.exon8;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . CDS 6916 7014 . + 0 ID=cds.g3746.t1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . three_prime_UTR 7015 7240 . + . ID=g3746.t1.utr3p1;Parent=g3746.t1 NODE_515_length_21984_cov_42.1532 . mRNA 4115 7240 . + . ID=g3746.t1.1.5b6be70c;Parent=g3746;Name=g3746.t1 NODE_515_length_21984_cov_42.1532 . five_prime_UTR 4115 4696 . + . ID=g3746.t1.1.5b6be70c.utr5p1;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 4115 4825 . + . ID=g3746.t1.1.5b6be70c.exon1;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 4697 4825 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 5155 5220 . + . ID=g3746.t1.1.5b6be70c.exon2;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 5155 5220 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 5535 5624 . + . ID=g3746.t1.1.5b6be70c.exon3;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 5535 5624 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 5951 6069 . + . ID=g3746.t1.1.5b6be70c.exon4;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 5951 6069 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 6224 6263 . + . ID=g3746.t1.1.5b6be70c.exon5;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 6224 6263 . + 1 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 6647 6718 . + . ID=g3746.t1.1.5b6be70c.exon6;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 6647 6718 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . exon 6916 7240 . + . ID=g3746.t1.1.5b6be70c.exon7;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . CDS 6916 7014 . + 0 ID=cds.g3746.t1.1.5b6be70c;Parent=g3746.t1.1.5b6be70c NODE_515_length_21984_cov_42.1532 . three_prime_UTR 7015 7240 . + . ID=g3746.t1.1.5b6be70c.utr3p1;Parent=g3746.t1.1.5b6be70c #PROT g3746.t1 g3746 MSLRVLVGCKRVVDYAVKVRVKPDKSGVVTENVKHSMNPFDEIAVEEAIKMKEKKLASEVIAVSCGPAACAEVLRTALAMGADKAIHVTVEGKDYETLQPLAVAKIFQKLTAETKSDIVILGKQAIDDDANQTGQMLAALLDWPQATFASKIESADGKLKVVREIDGGLETVEVKLPAVLTADLRLNQPRYATLPNIMKAKKKPLETKTAQSLGVDIKPHIETVSVEDPPVRKAGVKVETVEDLVAKLKAAGAF* #PROT g3746.t1.1.5b6be70c g3746 MKEKKLASEVIAVSCGPAACAEVLRTALAMGADKAIHVTVEGKDYETLQPLAVAKIFQKLTAETKSDIVILGKQAIDDDANQTGQMLAALLDWPQATFASKIESADGKLKVVREIDGGLETVEVKLPAVLTADLRLNQPRYATLPNIMKAKKKPLETKTAQSLGVDIKPHIETVSVEDPPVRKAGVKVETVEDLVAKLKAAGAF* # ORIGINAL: g3748.t1 original gene structure, not modified by PASA NODE_515_length_21984_cov_42.1532 AUGUSTUS gene 15608 19792 . - . ID=g3748;Name=g3748.t1 NODE_515_length_21984_cov_42.1532 AUGUSTUS mRNA 15608 19792 . - . ID=g3748.t1;Parent=g3748;Name=g3748.t1 NODE_515_length_21984_cov_42.1532 AUGUSTUS exon 15608 19792 . - . ID=g3748.t1.exon1;Parent=g3748.t1 NODE_515_length_21984_cov_42.1532 AUGUSTUS CDS 15608 19792 . - 0 ID=cds.g3748.t1;Parent=g3748.t1 #PROT g3748.t1 g3748 MDALVVKDDVCGSDTQCQLQTESPSDGLAEAAASPIDIIWRLPVELTQSHILPYLRGSDVLALSRVSKAYRKSFLPWCTLQLKPHIALRFVEDAKVCATVLRSLSPAVRLHVNLDDKSHITSFYSGFPHTEDGNSGSLLCVVHSISLARTFFSDASRLGGLHTLNLSRTYVTDASALGGVYALNLSHTHVTDVSALGGVHILDLSYTPVSDVSALGGVYALNLSYTFVSDVSALGGVHTLDISETSVDICNLSPLAERVHKLIVRSRDVVDVSSLRGAHTLVLSDCHSVTDVSALRGVHSLTMDSCCSIQDIRPVLSVPHLHFCSRFTDGVLCIYLPLFCDALVGFTLATAITIVRILVEVCTDPRTNWPSSPGATGRLVHLLLAVVNAHPTHRFLCEGALFVLALAVPAAVRQTQRSFPLSRYGSAALLEKQWTLPDTILRTIVTAVRAHRTSAGVQLNGCDLIALVVDQSASASRAVDGVPFVDAPVNDHLLKEAWGAVVAAAERIRSHPQRSPARNLWDSSSCKSGAEIVANALCALACSAVSADTALAMVDGGIIASLQDTNFTQTNLAFAALAEHPVCQSRMAANGDAQSVLFDAVIQRGYSPLTLDDPRLNLAVTCTVEGLSTSGRERSLEMLTAMTTWSHAFDPPIARAVLQIAYRILQTHASDAVVVAAVVKSLDRHVRSGQWQSSPALSNFVDLYLPILSLIVGAEDNGLSPGDGARDGGATAARVRGCCSEETECRCCTFAQVAASVFRFVRACGKRSASFPARQIALISATRVMYRMRSCWDTGHVIDKSGDCAVLVQVCMADWQTLIQMVCSPVVGSFFGWQIPLVLELAEEIAAVVDRHFDEMTRKKAAAFLAHLETMVGGDGQAGGLHAHTRRSLSRIVRDARIATDVCSIPQNEVLGWPEFRRSFYAMGGMAALIGDARQHRTNNSHCSMTVWHFVTDAINGLLMEVTDQRLAAASEVASFLLECMSDGGDSMWMSRASPLIAHMATQTEGRRAMLDGGAVPAIVRLLCAAMDARASPASVAMGPLGIKSVSAVHCVDGMSGALALHVTPTMIGNPAVSQPTANGSGATALPRMSPYARTLPGSAESGATPPPGTAAVVPIAFNLPGNAEWGATPPPGTAAVVPIAFKLPGSAESGGTPPPGTAAVVPFAFKLPGIAQSGISSPPKTELRVEAPHDALSGKHQRPPQASTSDTLAASFSLSFTSNHVIPSPPASLLAAPTETSTSNFPSAAIKGMLRTGPATSIRGDPALMLKCLDLLVSLGADADCLRAMVGGGGLHAIATVLGSGKFVEKCFTLIELIAAQIDSCECVDGDIDAVLDAALRAAYSREMGLALSALFATRVGKRCIVAKKKNVLRVLSSASGVTAPVASLRAAILECD* # PASA_UPDATE: g3745.t1, single gene model update, valid-1, status:[pasa:asmbl_7897,status:12], valid-1 NODE_515_length_21984_cov_42.1532 . gene 166 3718 . - . ID=g3745;Name=g3745.t1 NODE_515_length_21984_cov_42.1532 . mRNA 166 3718 . - . ID=g3745.t1;Parent=g3745;Name=g3745.t1 NODE_515_length_21984_cov_42.1532 . five_prime_UTR 3215 3718 . - . ID=g3745.t1.utr5p1;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . exon 1439 3718 . - . ID=g3745.t1.exon1;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . CDS 1439 3214 . - 0 ID=cds.g3745.t1;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . exon 1070 1174 . - . ID=g3745.t1.exon2;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . CDS 1070 1174 . - 0 ID=cds.g3745.t1;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . exon 536 588 . - . ID=g3745.t1.exon3;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . CDS 536 588 . - 0 ID=cds.g3745.t1;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . exon 166 196 . - . ID=g3745.t1.exon4;Parent=g3745.t1 NODE_515_length_21984_cov_42.1532 . CDS 166 196 . - 1 ID=cds.g3745.t1;Parent=g3745.t1;3_prime_partial=true #PROT g3745.t1 g3745 MDAAAAATLADDFAWLDQLQADSDRLMEDLDLMLSASAASLAAPPVAQATLDFPPTATASASFASASPISPAEATSAPVKAPSPAAPKSAVDASLDALVNELDSASVSFDDIFLPAAAEEPAAQTPSTAPAPKSAVDASLDALVNELDSASVSFDDMFLPAAAEEPAAQTPSTAPAPATAFDTDSLFADLELMLSAAGIEFAPSSSSKPVDVSHVPPVVTPVSVPTKTMTTPNTTSVDPFAPNTASVDPFAPNTASVDPFASKPHPSWSHESHAGASLHKTPSLPRERAEDALSAVRKGSVMGDGVPVPPRRTDSLTGTEQPFRPAPASAPSPSLSHKHHTRDHATDPAPATDASIANPSVFANPSSIPIASAPPTPDPSGEGRMRLNTLEAVLAQTQLLVDSLDMFDSSFDANAILSTPSVAEAPRNTPKAAAAAIIVLGTRADDIVAAIESTEADIFDSSYDALSMNALGGSRAPAGDGPTPPHPPLTTGTVCTTGTPAWRPKSASGGNSTPTPALPPPSDQNAASTLNVASVTGSQGAPLAPAAFAADSDDSVELSAEEFYESVADSLASIDSLESATSREGSESEVVAAVTNNATDGDVRASRVEGAVEREVPRIDAMTPEEKALYRRFKIAEELVTTERTYVNTLRVIKE # PASA_UPDATE: g6776.t1, single gene model update, valid-1, status:[pasa:asmbl_6733,status:12], valid-1 NODE_3924_length_2509_cov_38.6939 . gene 193 2335 . - . ID=g6776;Name=g6776.t1 NODE_3924_length_2509_cov_38.6939 . mRNA 193 2335 . - . ID=g6776.t1;Parent=g6776;Name=g6776.t1 NODE_3924_length_2509_cov_38.6939 . five_prime_UTR 2335 2335 . - . ID=g6776.t1.utr5p1;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . exon 2268 2335 . - . ID=g6776.t1.exon1;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . CDS 2268 2334 . - 0 ID=cds.g6776.t1;Parent=g6776.t1;5_prime_partial=true NODE_3924_length_2509_cov_38.6939 . exon 1588 2093 . - . ID=g6776.t1.exon2;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . CDS 1588 2093 . - 2 ID=cds.g6776.t1;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . exon 1207 1319 . - . ID=g6776.t1.exon3;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . CDS 1207 1319 . - 0 ID=cds.g6776.t1;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . exon 724 760 . - . ID=g6776.t1.exon4;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . CDS 724 760 . - 1 ID=cds.g6776.t1;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . exon 193 467 . - . ID=g6776.t1.exon5;Parent=g6776.t1 NODE_3924_length_2509_cov_38.6939 . CDS 193 467 . - 0 ID=cds.g6776.t1;Parent=g6776.t1;3_prime_partial=true #PROT g6776.t1 g6776 LAKSVISEARTWVARMINAHADEILFTSGGTESNNLVFHSVLQEYKADGSVSRDGEGPNAPPAEATHAQRPHFILSTLEHDSIILPVKAMAAAGLVDYTLVRADTRGFVQPESIVSAITPATRLVTLMLANNEIGTIQRVRDIARASREAARAVGVAGRLFVHTDAAQALGKITVDVNELEVDYLTVVGHKFYAPRIGALFVRELGRSGGAPLHPMLFGGGQERNYRPGTENTGMIAGLGKAAQLVCESLPAYASAMRTSRDLLEQRLVEQFGAENVAFNGRPCDATDADQRLPNTCNVSILLGDYSGYELLSRCARLRASVGAACHSANSH # PASA_UPDATE: g14245.t1, single gene model update, valid-1, status:[pasa:asmbl_1992,status:12], valid-1 NODE_1566_length_10449_cov_39.1963 . gene 86 4471 . + . ID=g14245;Name=g14245.t1 NODE_1566_length_10449_cov_39.1963 . mRNA 86 4471 . + . ID=g14245.t1;Parent=g14245;Name=g14245.t1 NODE_1566_length_10449_cov_39.1963 . five_prime_UTR 86 333 . + . ID=g14245.t1.utr5p1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 86 349 . + . ID=g14245.t1.exon1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 334 349 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 616 706 . + . ID=g14245.t1.exon2;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 616 706 . + 2 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 885 960 . + . ID=g14245.t1.exon3;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 885 960 . + 1 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 1097 1195 . + . ID=g14245.t1.exon4;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 1097 1195 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 1620 1829 . + . ID=g14245.t1.exon5;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 1620 1829 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 2065 2178 . + . ID=g14245.t1.exon6;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 2065 2178 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 2750 3610 . + . ID=g14245.t1.exon7;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 2750 3610 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 3861 3889 . + . ID=g14245.t1.exon8;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 3861 3889 . + 0 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . exon 4121 4471 . + . ID=g14245.t1.exon9;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . CDS 4121 4181 . + 1 ID=cds.g14245.t1;Parent=g14245.t1 NODE_1566_length_10449_cov_39.1963 . three_prime_UTR 4182 4471 . + . ID=g14245.t1.utr3p1;Parent=g14245.t1 #PROT g14245.t1 g14245 MEAAIEKATAETLSPGAEDWALIMDVCDRVTQSDGAAIEAVRILSKRVTDKNPNTAYQALVVLEACVKNCQRMFHFELFRKDNLEVISRLLQPRYATNIKVCNKINELLREWESEYGSDRSCGGLVAVCNQLRQEGFSLPEKSSAKSPSRSASIVQASPASASQGGQGQEDDDIARAIALSLQEANKNNKSVKSPSPTAAPNKLVRALFEFDPKEDNELGFKEGEIIQVIDDNDANWWRGTIGGFTGFFPANFVEPYKGDKPSVPGQIPRQQPPPPTTQHQQPQQQPQQQQQQQRSTAVNTQQPPTTQAPSVATTKTPVAPAFSPEQVDVLLQMLSNADPAGSNASENDLLAEVMASSLAMRPVLNQKLKVAEVKRDGYAGVNERFCKAIVQYDALQRQVRQQQQQQQQQLQQQQQQPSQQLPYGGLVSPPQSVGYGNAPSYGGTLPYPSPVQQQQPQQPQQQPSGQYYAQSPVPGYAGQPQQQYGPPQQMYQPQPPPGYAPPQNVQYGAPHQSTPIR* # ORIGINAL: g14246.t1 original gene structure, not modified by PASA NODE_1566_length_10449_cov_39.1963 AUGUSTUS gene 4763 7424 . - . ID=g14246;Name=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS mRNA 4763 7424 . - . ID=g14246.t1;Parent=g14246;Name=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 7266 7424 . - . ID=g14246.t1.exon1;Parent=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 7266 7424 . - 0 ID=cds.g14246.t1;Parent=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 6953 7038 . - . ID=g14246.t1.exon2;Parent=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 6953 7038 . - 0 ID=cds.g14246.t1;Parent=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 4763 6818 . - . ID=g14246.t1.exon3;Parent=g14246.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 4763 6818 . - 1 ID=cds.g14246.t1;Parent=g14246.t1 #PROT g14246.t1 g14246 MAAQRVTVPLWNDVAVCDAGVARTTAVGVAPAPRPVSLAAFKALSRSASVAAKHLRKPELWIDAQLLNRLLYRNRNQHRRSKLFQQLCHVRRILARLEALSFADGVQSFSDALPSKFISKSHGDRLDPSACFPTSETASSLLVLAMSTVRLVVALKDAAVAAYAVCESFLSAAEFMTFALVMAATLARVHVLADALLADTCTFYDALRPWIVLLPASTKTMTAAPLEGAIPQLSLDVASALPESLSTWLEECIRANPKVPFGAKRACVTVTNFAVPSADHFPSVDLKSPATAHPPAAPQSVAAMKSPPTLISGVCSANDDDFGVPMDTIASSVVLRDHISVPVDRRGRDHVGKLGSMNDSTFSTVMSVPAVADSDDDDDESDEEYGKGDDENDGQTRGSAGDASNEYSNDISNENSNDSSDDSDDSDDTDNDGDVSGDAVHTGALLSPTHKVGRVGIDADTAAKAEKFKHIAPAAVCVTKSVGKDTEGSAARPLATKHVIASPQKTRPADSTKTLNRNDIAVLEGVGSKKKLNGSVASVAPDVKASVLSAGVPVPLRDKSVVSSPTPADGTRPSKESTVLAQKSHHKGGIARKEGPPKMQQTHKTQSQSQSQSQSQSSVRTLKRPRDDDGDGDTHGRSVAAKKRSLDSSAKQPQSTDIASILFGGVQKDVANAVRTPSRLFSDGRNNPARGGANVSLANRASGNSSSLLNEATSGERRGPSLLPTATATVVGTAGAHNLKKKAKKEKKEMRRTNATDDDLDDIFGF* # ORIGINAL: g14247.t1 original gene structure, not modified by PASA NODE_1566_length_10449_cov_39.1963 AUGUSTUS gene 8273 10157 . + . ID=g14247;Name=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS mRNA 8273 10157 . + . ID=g14247.t1;Parent=g14247;Name=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 8273 8548 . + . ID=g14247.t1.exon1;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 8273 8548 . + 0 ID=cds.g14247.t1;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 8745 9215 . + . ID=g14247.t1.exon2;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 8745 9215 . + 0 ID=cds.g14247.t1;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 9512 9679 . + . ID=g14247.t1.exon3;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 9512 9679 . + 0 ID=cds.g14247.t1;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS exon 9873 10157 . + . ID=g14247.t1.exon4;Parent=g14247.t1 NODE_1566_length_10449_cov_39.1963 AUGUSTUS CDS 9873 10157 . + 0 ID=cds.g14247.t1;Parent=g14247.t1 #PROT g14247.t1 g14247 MRRSFTTAEAPASPNPSKRESGGDASLLSASSSTSDVASRSVGKKAGENAKRVATHVLRQMLEEEREKLRQLLAQYEKLYDPPEALERKVVEMQKYVAEMENMLDTRVKAYDIRGDSELRSLRYLPRSEEFPFAQPDSEFNVVFEEDEITDQLSGSLASSTMSIPVIRAATIEKMVERLTFDEYFDPTYLSQFLFTYKSFVTSREFLDLLIKRYSMPMPIVCTEEDLEKFKSRILSPVRLRVINVLKHWVDRHFDDFSSDEVLSNQLDGFLDTIKNTSGMETQYEVLRKLVNRRASSTEETVAVTFRTPAPPPIMPLELSPTDPMQFDPLEIARQITLIEFEMYRSISPSDLGQLACGESKEDSFMALSNRFNEACSIPGLFGGFLVLFWAFVCCCVAM* # PASA_UPDATE: g10479.t1, single gene model update, valid-1, status:[pasa:asmbl_6767,status:12], valid-1 NODE_3957_length_2464_cov_33.7794 . gene 162 1494 . - . ID=g10479;Name=g10479.t1 NODE_3957_length_2464_cov_33.7794 . mRNA 162 1494 . - . ID=g10479.t1;Parent=g10479;Name=g10479.t1 NODE_3957_length_2464_cov_33.7794 . five_prime_UTR 1411 1494 . - . ID=g10479.t1.utr5p1;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . exon 1291 1494 . - . ID=g10479.t1.exon1;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . CDS 1291 1410 . - 0 ID=cds.g10479.t1;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . exon 553 668 . - . ID=g10479.t1.exon2;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . CDS 553 668 . - 0 ID=cds.g10479.t1;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . exon 162 208 . - . ID=g10479.t1.exon3;Parent=g10479.t1 NODE_3957_length_2464_cov_33.7794 . CDS 162 208 . - 1 ID=cds.g10479.t1;Parent=g10479.t1;3_prime_partial=true #PROT g10479.t1 g10479 MNIRRATPDDLLNMQHANLLCLPENYQMKYYFYHAMSWPQLSYVAEDERGRIVGYVLAKMEEEPNVEPHGHITSIAVLRSHRRLGLAQKLMEQA # ORIGINAL: g5478.t1 original gene structure, not modified by PASA NODE_762_length_18031_cov_42.5779 AUGUSTUS gene 2253 3753 . - . ID=g5478;Name=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS mRNA 2253 3753 . - . ID=g5478.t1;Parent=g5478;Name=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS exon 3076 3753 . - . ID=g5478.t1.exon1;Parent=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS CDS 3076 3753 . - 0 ID=cds.g5478.t1;Parent=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS exon 2676 2959 . - . ID=g5478.t1.exon2;Parent=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS CDS 2676 2959 . - 0 ID=cds.g5478.t1;Parent=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS exon 2253 2520 . - . ID=g5478.t1.exon3;Parent=g5478.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS CDS 2253 2520 . - 1 ID=cds.g5478.t1;Parent=g5478.t1 #PROT g5478.t1 g5478 MNKRDTFVELASTYSIAIQAGIAMIIYAKIFSVFPSTACLFAGQEADCRPEWFAYTWRMFFVLAMHLIVLTAGHVSFPLIFPRLAKRMLVPLAINGAYVTVLFVAGQWNDYLFTPTFIAPVVQLYDMLITAARNPVITEFEESSQSAKSFAFKTLLAMFALAIYARLCVRSIVDSTYGEVLTFRIVVHTLVVNILSLVLRRPVAMMSSLPAYHGLTLWYWISIVLSLIGRLLMFKSQSIGQAFLMNFLTGLLEIAIRRSYFIRSRWTGALSGKVADILVGLGFKRPSATTKARNLDIYAAHVAVETIVDVQAAVAALVLVRVFSQRRNCYDFAAGTQNEAVQIVNVVLMLVVGYAVDFSSMRWEQRHKIDVGSIFRGIPRWPFFFFSCACACTVVHLTDWSYVRNCPVV* # PASA_UPDATE: g5480.t1, single gene model update, valid-1, status:[pasa:asmbl_9250,status:3], valid-1 # PASA_UPDATE: g5480.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9249,status:13],[pasa:asmbl_9251,status:12], valid-1 NODE_762_length_18031_cov_42.5779 . gene 7164 10600 . - . ID=g5480;Name=g5480.t1 NODE_762_length_18031_cov_42.5779 . mRNA 7164 10600 . - . ID=g5480.t1;Parent=g5480;Name=g5480.t1 NODE_762_length_18031_cov_42.5779 . five_prime_UTR 10189 10600 . - . ID=g5480.t1.utr5p1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 10006 10600 . - . ID=g5480.t1.exon1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 10006 10188 . - 0 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 9719 9890 . - . ID=g5480.t1.exon2;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 9719 9890 . - 0 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 9528 9628 . - . ID=g5480.t1.exon3;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 9528 9628 . - 2 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 9238 9405 . - . ID=g5480.t1.exon4;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 9238 9405 . - 0 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 7958 9024 . - . ID=g5480.t1.exon5;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 7958 9024 . - 0 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 7753 7833 . - . ID=g5480.t1.exon6;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 7753 7833 . - 1 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . exon 7164 7551 . - . ID=g5480.t1.exon7;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . CDS 7446 7551 . - 1 ID=cds.g5480.t1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . three_prime_UTR 7164 7445 . - . ID=g5480.t1.utr3p1;Parent=g5480.t1 NODE_762_length_18031_cov_42.5779 . mRNA 7646 10598 . - . ID=g5480.t1.1.5b6be70c;Parent=g5480;Name=g5480.t1 NODE_762_length_18031_cov_42.5779 . five_prime_UTR 10189 10598 . - . ID=g5480.t1.1.5b6be70c.utr5p1;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . exon 10006 10598 . - . ID=g5480.t1.1.5b6be70c.exon1;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . CDS 10006 10188 . - 0 ID=cds.g5480.t1.1.5b6be70c;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . exon 9719 9890 . - . ID=g5480.t1.1.5b6be70c.exon2;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . CDS 9719 9890 . - 0 ID=cds.g5480.t1.1.5b6be70c;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . exon 9528 9628 . - . ID=g5480.t1.1.5b6be70c.exon3;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . CDS 9528 9628 . - 2 ID=cds.g5480.t1.1.5b6be70c;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . exon 9238 9405 . - . ID=g5480.t1.1.5b6be70c.exon4;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . CDS 9238 9405 . - 0 ID=cds.g5480.t1.1.5b6be70c;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . exon 7646 9024 . - . ID=g5480.t1.1.5b6be70c.exon5;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . CDS 7900 9024 . - 0 ID=cds.g5480.t1.1.5b6be70c;Parent=g5480.t1.1.5b6be70c NODE_762_length_18031_cov_42.5779 . three_prime_UTR 7646 7899 . - . ID=g5480.t1.1.5b6be70c.utr3p1;Parent=g5480.t1.1.5b6be70c #PROT g5480.t1 g5480 MSNRSTSHEASEHVTRAPKKMEVNINTLTGDGFSLRVSPYETVMSVKAKIQKQEGIPISQQHLVWRSVALEDDYTLSDYAITDGATLQLVLHLRGGPINTRRITYEDTVLREVAELVDGREDLFKKIFEGKDRSRPVTLLVYRDGDRLSLIEVVHREDGTITPLDRDRTPTPPLCDPVEEAAGIAEQMRENAAMRLKMKKLQASLSKNKQEKQRKLESEGVVAVPTSAEAVAHAASTASLGSTQPGTVTASASSLSEGPLTSKASSTSSFGGLKKGFLSSSGKPKEPPSATAGQAATHATPARTSKGDTAAEQPHHHHHDVITSAIASAAATSASATVVGVGASGDYHHDHVHREHHALLSTTPGSESSFGPIAGMGSRVRRVGSAGTVAPTALSRTPDERPAASVGRPHHSVASLVARPVTDAEEVRMHKSRRETMSARPARRNEVVSIDSLRRSTRSCVTGRTAAAQPAHPDGSGSSLSGTAVAKAKSAVSHANASTQASSSSVGAGAAGVRPRSAKRTSESVLPSLGTATARLVATSAAEAAVAAEASKSSGGADGFGPNKCHSCGKKLGLASNYPCRCGLAFCAKHRHAELHGCTYDYKSAGRRLLEESNPVVAASKLPKI* #PROT g5480.t1.1.5b6be70c g5480 MSNRSTSHEASEHVTRAPKKMEVNINTLTGDGFSLRVSPYETVMSVKAKIQKQEGIPISQQHLVWRSVALEDDYTLSDYAITDGATLQLVLHLRGGPINTRRITYEDTVLREVAELVDGREDLFKKIFEGKDRSRPVTLLVYRDGDRLSLIEVVHREDGTITPLDRDRTPTPPLCDPVEEAAGIAEQMRENAAMRLKMKKLQASLSKNKQEKQRKLESEGVVAVPTSAEAVAHAASTASLGSTQPGTVTASASSLSEGPLTSKASSTSSFGGLKKGFLSSSGKPKEPPSATAGQAATHATPARTSKGDTAAEQPHHHHHDVITSAIASAAATSASATVVGVGASGDYHHDHVHREHHALLSTTPGSESSFGPIAGMGSRVRRVGSAGTVAPTALSRTPDERPAASVGRPHHSVASLVARPVTDAEEVRMHKSRRETMSARPARRNEVVSIDSLRRSTRSCVTGRTAAAQPAHPDGSGSSLSGTAVAKAKSAVSHANASTQASSSSVGAGAAGVRPRSAKRTSESVLPSLGTATARLVATSAAEAAVAAEASKSSGGADGFGPNKWVLCVRCVCIFAVMLMIL* # ORIGINAL: g5479.t1 original gene structure, not modified by PASA NODE_762_length_18031_cov_42.5779 AUGUSTUS gene 3824 6238 . - . ID=g5479;Name=g5479.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS mRNA 3824 6238 . - . ID=g5479.t1;Parent=g5479;Name=g5479.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS exon 3824 6238 . - . ID=g5479.t1.exon1;Parent=g5479.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS CDS 3824 6238 . - 0 ID=cds.g5479.t1;Parent=g5479.t1 #PROT g5479.t1 g5479 MAADGFHPLGNDAGGEHSDAITREAAEISANNASSVLHAAVGVHNPSNSKHVDPDLDDGVEGYISNDDSFQVNVDVLSDDLIGSSQHRQPVDIVEEDKASTRQQLDVLGPSRTIGVSLVATSSGHALSSDQGLDFDLLGTGAFLTTLGAPLNFDHENHSAKGNRALRRTYMGPFMVALGLLPMSYAHSRSRFVRFMARAVFVVYAAFMSISLVGFVVFLLVQFFRKGIGNSDANVANATLFAASVCFVGAFLYMQALVGRTTVYYDRVANVGSNGPNALNAAIKQRRQKKALVALYGPALCLCMLCASFLSLGLVGRESSVSYVGYYVLQPWSSLTDSGEANIAITLAMIVLSFAQNVVGIFYTMLLFHAAVIMIKEFNEGIREGAAQFELTDRHEDAQAIAVRLGAVIRAAAQHTLLLTKLLNRMRTTLNIVIAGILCTAIVCVTGLSTESGLTWAYLSLYIIVLTNSSYVAESVARGEDRLRIGLLELADSMARGTKVLGQQRDRFKATLVAASASNTFGGSVLTTSVGSAGGHVIQPRRALGRLPSAVVEASPPTQRYHAATNDTTHRHGAHEVMHIPGIVVIEDVSDELQDETTGTKDDHKAVGGDDVITPDEARYIVAPILALEGRAELLLTEKEQEEFFRWVNAMAAEFEEDSNSDSDGNTDHGDREDCATTSPSRETSFTAHNTTDDGLRSDLAPTETPPQCSSAWPRDRSKHSDAPSALFASSANGTLVQLQSVFHGPRLFASSAGLHPPMPDRHAPPNGTFGSTVSLAPRAQKRRNTTTARQSILAYEGRHAPRW* # ORIGINAL: g5477.t1 original gene structure, not modified by PASA NODE_762_length_18031_cov_42.5779 AUGUSTUS gene 1 570 . - . ID=g5477;Name=g5477.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS mRNA 1 570 . - . ID=g5477.t1;Parent=g5477;Name=g5477.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS exon 1 570 . - . ID=g5477.t1.exon1;Parent=g5477.t1 NODE_762_length_18031_cov_42.5779 AUGUSTUS CDS 1 570 . - 0 ID=cds.g5477.t1;Parent=g5477.t1 #PROT g5477.t1 g5477 MPSPGGVSSPSDHGMPLRTPTGALLGTTVSGVGGSRTHWHPLAHGGSHADDIAVGSGDCGAAADKDDTEFINALVLATADAQVGTSAGTCTEDITNDDILDAVDWDTRHAVAADHEPTESEYRDAGHTGLRLLQTADIEHQVDGLEDATAMSIDIALVDCELRQSGTAVDDANGHLSAAVTAGSCGRTHS # PASA_UPDATE: g5481.t1, single gene model update, valid-1, status:[pasa:asmbl_9252,status:3], valid-1 NODE_762_length_18031_cov_42.5779 . gene 11458 16428 . + . ID=g5481;Name=g5481.t1 NODE_762_length_18031_cov_42.5779 . mRNA 11458 16428 . + . ID=g5481.t1;Parent=g5481;Name=g5481.t1 NODE_762_length_18031_cov_42.5779 . five_prime_UTR 11458 11669 . + . ID=g5481.t1.utr5p1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 11458 11801 . + . ID=g5481.t1.exon1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 11670 11801 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 12109 12324 . + . ID=g5481.t1.exon2;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 12109 12324 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 12519 12667 . + . ID=g5481.t1.exon3;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 12519 12667 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 12862 12931 . + . ID=g5481.t1.exon4;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 12862 12931 . + 1 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 13064 13177 . + . ID=g5481.t1.exon5;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 13064 13177 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 13396 13464 . + . ID=g5481.t1.exon6;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 13396 13464 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 13665 13811 . + . ID=g5481.t1.exon7;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 13665 13811 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 14032 14349 . + . ID=g5481.t1.exon8;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 14032 14349 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 14485 14581 . + . ID=g5481.t1.exon9;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 14485 14581 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 14717 14781 . + . ID=g5481.t1.exon10;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 14717 14781 . + 2 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 14923 15063 . + . ID=g5481.t1.exon11;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 14923 15063 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 15210 15341 . + . ID=g5481.t1.exon12;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 15210 15341 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 15483 15628 . + . ID=g5481.t1.exon13;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 15483 15628 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 15788 15923 . + . ID=g5481.t1.exon14;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 15788 15923 . + 1 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . exon 16126 16428 . + . ID=g5481.t1.exon15;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . CDS 16126 16191 . + 0 ID=cds.g5481.t1;Parent=g5481.t1 NODE_762_length_18031_cov_42.5779 . three_prime_UTR 16192 16428 . + . ID=g5481.t1.utr3p1;Parent=g5481.t1 #PROT g5481.t1 g5481 MVHTPTARKLQEVEPSGYHSSSSKTQKQLDVDLLDGSQISLIIDKKTSAFDVIEHVSSKINLADRQYFGIAVPDAMDELSFLLPEARLWKYAAASRTFFKVKFRIRHFVEDISIIKDNLALSVYFQQIRAAIVLGDLQVEDAMAVSLAALMLQAEKGDMTAPVGDSYFRPEDFLPSFTVQRLGGQLYSQVGALHARIRGVTRKQAELEFLKLAQKNPEYGSHMFRIWNKAGDQQWIGISYAGVTTYNEVLGQRYLDHRFLWPKTRSIVYKNTKLTITDNDGKVYVGYTRSYKKCEYIISNCRITHEFASRVKKALARARAGGQLSSANLLLDVTPIATSSAPAPAPVAVAAPSVPAITFGAEPAAVPALVPPSGVAPPPPTGDLARLEAELQETIERGLAYEQYEELNLEMSREQIEYPTATNAVNKDKNRYRNVLPIENTRVRLTTAESDYINANFIEVQAGTRRLVYIASQGPLPTTSEDFWRMVWEQKVPLIVMATKVEEAGKVKCHKYYPDSVGEAVQFGPFRIMNVSQDDCIQYIRRHFEVTNVETDAMVSVTQLHHVTWPDHGVPSSPSDILDFVREMHRLSDQSKPTVVHCSAGIGRTGTLIVVDVIMEKLRQNERVDIMEIVRELRQQRAGMVQTPGQYQFCYVTFHEEVRQMLGLA* # PASA_UPDATE: g11447.t1, single gene model update, valid-1, status:[pasa:asmbl_6024,status:12], valid-1 NODE_3404_length_3547_cov_46.9816 . gene 333 2995 . + . ID=g11447;Name=g11447.t1 NODE_3404_length_3547_cov_46.9816 . mRNA 333 2995 . + . ID=g11447.t1;Parent=g11447;Name=g11447.t1 NODE_3404_length_3547_cov_46.9816 . exon 333 421 . + . ID=g11447.t1.exon1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 333 421 . + 0 ID=cds.g11447.t1;Parent=g11447.t1;5_prime_partial=true NODE_3404_length_3547_cov_46.9816 . exon 550 725 . + . ID=g11447.t1.exon2;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 550 725 . + 1 ID=cds.g11447.t1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . exon 954 1330 . + . ID=g11447.t1.exon3;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 954 1330 . + 2 ID=cds.g11447.t1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . exon 1509 2372 . + . ID=g11447.t1.exon4;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 1509 2372 . + 0 ID=cds.g11447.t1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . exon 2511 2602 . + . ID=g11447.t1.exon5;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 2511 2602 . + 0 ID=cds.g11447.t1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . exon 2731 2995 . + . ID=g11447.t1.exon6;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . CDS 2731 2830 . + 1 ID=cds.g11447.t1;Parent=g11447.t1 NODE_3404_length_3547_cov_46.9816 . three_prime_UTR 2831 2995 . + . ID=g11447.t1.utr3p1;Parent=g11447.t1 #PROT g11447.t1 g11447 VNDNAKARARTLIQTLYEKALALKAWSLVRRTAGILGKAVNSLTSALLEMLLRQRVLTIGAIGAETLVASPLSPAVLCDLIYKGHGAIDPREPCLVQELIVYLGSFIRGEPTLFEGIARVRMCNIVSAIKEKLAMDWGISPPDAVTIMYDMSPSEIKAVLHDVLSVAGPIYPRKGAAPAAAGLPESTACGRTPRHLEVSVQSAGFADGCFAHIEVGDVVSDTHSRGLHVALVEPLTGALLDICSFDTHAHPGESDELAVFLETHSPHTITILSVRDEASRFLSDRARAAITALGSAHIHELGYRDSWCVIGRYGAVLGSVPESLRKTGGGATDILRASFDVVASRSSAVALATESLPSAGAWLGCRRIHGALNRVPHATFFRLVWGILARTDGGISASASRRLNRIPTVLQMTENEPNFVFCVEQLLDAFVQPAERQIAVEVMCALAECAGDLRIIRSSRAVDRAPSAAFTPLAETERIASSESATIMRPGALECAVFSLSPPAYVCVDDIIFTAVDLYSRDTLELGPSIDTRMRFCDLPPTGHQSVRYYIDAALDAMLSEAQRK* # ORIGINAL: g13041.t1 original gene structure, not modified by PASA NODE_1121_length_13795_cov_43.4039 AUGUSTUS gene 5226 6569 . + . ID=g13041;Name=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS mRNA 5226 6569 . + . ID=g13041.t1;Parent=g13041;Name=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 5226 5511 . + . ID=g13041.t1.exon1;Parent=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 5226 5511 . + 0 ID=cds.g13041.t1;Parent=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 5906 6270 . + . ID=g13041.t1.exon2;Parent=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 5906 6270 . + 2 ID=cds.g13041.t1;Parent=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 6459 6569 . + . ID=g13041.t1.exon3;Parent=g13041.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 6459 6569 . + 0 ID=cds.g13041.t1;Parent=g13041.t1 #PROT g13041.t1 g13041 MSVAFSIFYMNLLAFQTVTLLFTRRKFGWDSDYAGYFLSSAYIARFAVVVILLPLYYAKGRRLMSEPRLVQLSGLFAVLSAVGYALAGTGAEMFAVISVDAFSGFAVPVMRGLYSKFVLPTEQGAVFSAIAALESIFGIVSPLLFDTVYSASCKFFPGLSFIIMAAVAGLAVASLSFVTAPKEAPCGYVRVDGDDARSDEDGSGEEDEAASDMAEGEAPLPTRPYGAVNGLPARIVGSRDSAADRLLGRNSDV* # ORIGINAL: g13039.t1 original gene structure, not modified by PASA NODE_1121_length_13795_cov_43.4039 AUGUSTUS gene 1101 3462 . - . ID=g13039;Name=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS mRNA 1101 3462 . - . ID=g13039.t1;Parent=g13039;Name=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 3269 3462 . - . ID=g13039.t1.exon1;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 3269 3462 . - 0 ID=cds.g13039.t1;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 2405 3151 . - . ID=g13039.t1.exon2;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 2405 3151 . - 1 ID=cds.g13039.t1;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 1544 2255 . - . ID=g13039.t1.exon3;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 1544 2255 . - 1 ID=cds.g13039.t1;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 1101 1229 . - . ID=g13039.t1.exon4;Parent=g13039.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 1101 1229 . - 0 ID=cds.g13039.t1;Parent=g13039.t1 #PROT g13039.t1 g13039 MSHALVGGWRAGCARASGAAAVRLGGLLAARQPQLQHQQRHQQPPVYAHMQLLHTIPALHARAPRGTRKSGIDRLNEQFMRERLQEDGSLDPSFVALEGESADADAGAGSGGNPLAGEATRGRRSLKEALAQVLAMKEAVMAARASGKGGDANNAEEDGKFLDAEEALKLTAKKEFATDIHKVRALSNMMKVHKTYGVKPGDWTAEGEPIGAKEERERDQRRRVDERYEEAEKTMLRLMAEEDDVEVPEEGRLRRVAETDAGVTDAKAKRRAAEMLKAKLAMKASMDEKGDSRDIMRGLGPKKAEIHSKFLTVKRASGHNRNSKDSADLNRQIETVVRAATSQVLSRAVQTVDSKARGTPQPPIDSTPVGVSTDDIEAHAVSVLQARGGDMDQEAKMALVQSVHESLRKRIEPALRSRINKNAWEGPFDNAPTPGIAFDSGSDRSSLPRPENLPSLFEREDTFDVNDNDDDILNMSDQPKRGSGEARRMNKALTKMHEDTQEFHEWLKQRKLQMKLQKPSKFLNEAAGKLGLGEGVNLTESMKRAIVKEVKTDLNKLARAKYGGRLKLPKEFDGVPRMGVRVLQIQEEYLKVC* # ORIGINAL: g13040.t1 original gene structure, not modified by PASA NODE_1121_length_13795_cov_43.4039 AUGUSTUS gene 4035 4994 . + . ID=g13040;Name=g13040.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS mRNA 4035 4994 . + . ID=g13040.t1;Parent=g13040;Name=g13040.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 4035 4642 . + . ID=g13040.t1.exon1;Parent=g13040.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 4035 4642 . + 0 ID=cds.g13040.t1;Parent=g13040.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS exon 4808 4994 . + . ID=g13040.t1.exon2;Parent=g13040.t1 NODE_1121_length_13795_cov_43.4039 AUGUSTUS CDS 4808 4994 . + 1 ID=cds.g13040.t1;Parent=g13040.t1 #PROT g13040.t1 g13040 MAIASAVDAPGVSKQGCIGSRWQPTAWFVAPVLFLSLFVAVVQVTVLQLAVQDVMCERYANRTAVDYNPRRCKDDKASSEASLWSMYLNLAVTLPSIVTAGTLGALSDTYGRKIMMILPSLGACIQSFLFVVWSELDLGLEFLFVGQVLWGISGGVPTLLMAVFAYVADSCPPTQRSLQIGLMETLIYLGSAAGPLFAGLLSIQFGHVMPFIVSGATLALLAVYCALIPESLSAEKRVLRPNWRRANLIGALAILVKPTAQGYK* # PASA_UPDATE: g13043.t1, single gene model update, valid-1, status:[pasa:asmbl_469,status:3], valid-1 NODE_1121_length_13795_cov_43.4039 . gene 9059 11950 . - . ID=g13043;Name=g13043.t1 NODE_1121_length_13795_cov_43.4039 . mRNA 9059 11950 . - . ID=g13043.t1;Parent=g13043;Name=g13043.t1 NODE_1121_length_13795_cov_43.4039 . five_prime_UTR 11746 11950 . - . ID=g13043.t1.utr5p1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . five_prime_UTR 11561 11581 . - . ID=g13043.t1.utr5p2;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 11746 11950 . - . ID=g13043.t1.exon1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 11512 11581 . - . ID=g13043.t1.exon2;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 11512 11560 . - 0 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 11221 11352 . - . ID=g13043.t1.exon3;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 11221 11352 . - 2 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 10863 11093 . - . ID=g13043.t1.exon4;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 10863 11093 . - 2 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 10405 10581 . - . ID=g13043.t1.exon5;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 10405 10581 . - 2 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 10118 10269 . - . ID=g13043.t1.exon6;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 10118 10269 . - 2 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 9856 9990 . - . ID=g13043.t1.exon7;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 9856 9990 . - 0 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . exon 9059 9697 . - . ID=g13043.t1.exon8;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . CDS 9599 9697 . - 0 ID=cds.g13043.t1;Parent=g13043.t1 NODE_1121_length_13795_cov_43.4039 . three_prime_UTR 9059 9598 . - . ID=g13043.t1.utr3p1;Parent=g13043.t1 #PROT g13043.t1 g13043 MSEELDINSVIERLLEVRGSKPGKQVNLTENEIRLLCVKAREIFLSQPILLELEAPLKICGDIHGQYFDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAALIDEKIFCCHGGLSPDLQSMDQIRRVMRPTDVPDTGLLCDLLWSDPDKDVSGWGENDRGVSFTFGANVVTQFLQKQDMDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMSVDESLMCSFQILKPAEKKTKYAYGGIGSGRPVTPPRVPKKKT* # PASA_UPDATE: g13042.t1, single gene model update, valid-1, status:[pasa:asmbl_468,status:3], valid-1 NODE_1121_length_13795_cov_43.4039 . gene 6848 8754 . - . ID=g13042;Name=g13042.t1 NODE_1121_length_13795_cov_43.4039 . mRNA 6848 8754 . - . ID=g13042.t1;Parent=g13042;Name=g13042.t1 NODE_1121_length_13795_cov_43.4039 . five_prime_UTR 8678 8754 . - . ID=g13042.t1.utr5p1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . exon 8621 8754 . - . ID=g13042.t1.exon1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . CDS 8621 8677 . - 0 ID=cds.g13042.t1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . exon 8290 8420 . - . ID=g13042.t1.exon2;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . CDS 8290 8420 . - 0 ID=cds.g13042.t1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . exon 7975 8108 . - . ID=g13042.t1.exon3;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . CDS 7975 8108 . - 1 ID=cds.g13042.t1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . exon 7575 7708 . - . ID=g13042.t1.exon4;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . CDS 7575 7708 . - 2 ID=cds.g13042.t1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . exon 6848 7385 . - . ID=g13042.t1.exon5;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . CDS 7338 7385 . - 0 ID=cds.g13042.t1;Parent=g13042.t1 NODE_1121_length_13795_cov_43.4039 . three_prime_UTR 6848 7337 . - . ID=g13042.t1.utr3p1;Parent=g13042.t1 #PROT g13042.t1 g13042 MAEDDSGNDGGDNGAQQTQEGTVTVARSIAELSEAPSADNQENASRMPQKLYENTYRTHPTKKFQHWVVAEIINDVLTAKLKEEKYDEQASKQLSKTLSAIILERVKDLGFSRYKYVCLVSIGSNRGQGIRVTSRCLWDLDKDSYASSSFKNASLFATGVVFGLYFE* # PASA_UPDATE: g13044.t1, single gene model update, valid-1, status:[pasa:asmbl_466,status:3], valid-1 NODE_1121_length_13795_cov_43.4039 . gene 12633 13783 . + . ID=g13044;Name=g13044.t1 NODE_1121_length_13795_cov_43.4039 . mRNA 12633 13783 . + . ID=g13044.t1;Parent=g13044;Name=g13044.t1 NODE_1121_length_13795_cov_43.4039 . five_prime_UTR 12633 12675 . + . ID=g13044.t1.utr5p1;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . exon 12633 12783 . + . ID=g13044.t1.exon1;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . CDS 12676 12783 . + 0 ID=cds.g13044.t1;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . exon 12955 13153 . + . ID=g13044.t1.exon2;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . CDS 12955 13153 . + 0 ID=cds.g13044.t1;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . exon 13274 13783 . + . ID=g13044.t1.exon3;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . CDS 13274 13551 . + 2 ID=cds.g13044.t1;Parent=g13044.t1 NODE_1121_length_13795_cov_43.4039 . three_prime_UTR 13552 13783 . + . ID=g13044.t1.utr3p1;Parent=g13044.t1 #PROT g13044.t1 g13044 MVIRSVEDAATELKFETLKWDDDQMATRLLACACEQVKPVVARRKWRVGIVREFYPTNDRLLGLNVNAGQEIKIRLRKPGNKLSFYPHHDVLGTLVHELTHNEIGPHNAGFYRLMDEIYAEVEALIEKGAVPSFDGYRYAGEGEKLGGAIVHDRRAVRTAAAAAAERRLRNIAMLGNGPRLVLAIPSFAWFVVV* # PASA_UPDATE: g6266.t1, single gene model update, valid-1, status:[pasa:asmbl_2862,status:12], valid-1 NODE_1873_length_8786_cov_37.3505 . gene 76 7478 . + . ID=g6266;Name=g6266.t1 NODE_1873_length_8786_cov_37.3505 . mRNA 76 7478 . + . ID=g6266.t1;Parent=g6266;Name=g6266.t1 NODE_1873_length_8786_cov_37.3505 . five_prime_UTR 76 77 . + . ID=g6266.t1.utr5p1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 76 438 . + . ID=g6266.t1.exon1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 78 438 . + 0 ID=cds.g6266.t1;Parent=g6266.t1;5_prime_partial=true NODE_1873_length_8786_cov_37.3505 . exon 705 1010 . + . ID=g6266.t1.exon2;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 705 1010 . + 2 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 1276 5435 . + . ID=g6266.t1.exon3;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 1276 5435 . + 2 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 5721 5933 . + . ID=g6266.t1.exon4;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 5721 5933 . + 0 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 6145 6332 . + . ID=g6266.t1.exon5;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 6145 6332 . + 0 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 6728 6806 . + . ID=g6266.t1.exon6;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 6728 6806 . + 1 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . exon 7048 7478 . + . ID=g6266.t1.exon7;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . CDS 7048 7188 . + 0 ID=cds.g6266.t1;Parent=g6266.t1 NODE_1873_length_8786_cov_37.3505 . three_prime_UTR 7189 7478 . + . ID=g6266.t1.utr3p1;Parent=g6266.t1 #PROT g6266.t1 g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g6267.t1, single gene model update, valid-1, status:[pasa:asmbl_2863,status:12], valid-1 NODE_1873_length_8786_cov_37.3505 . gene 7878 8599 . - . ID=g6267;Name=g6267.t1 NODE_1873_length_8786_cov_37.3505 . mRNA 7878 8599 . - . ID=g6267.t1;Parent=g6267;Name=g6267.t1 NODE_1873_length_8786_cov_37.3505 . exon 7878 8599 . - . ID=g6267.t1.exon1;Parent=g6267.t1 NODE_1873_length_8786_cov_37.3505 . CDS 8228 8599 . - 0 ID=cds.g6267.t1;Parent=g6267.t1 NODE_1873_length_8786_cov_37.3505 . three_prime_UTR 7878 8227 . - . ID=g6267.t1.utr3p1;Parent=g6267.t1 #PROT g6267.t1 g6267 MQFEKVFRGHFSHAWDLILVDSHEVRQLMRDVIARAIASNLILSDRADVPAETSAPRSQPHTPSHNTHTHAHDHGASGITLAPPAENNGGALSLSTLEGRLRGSSARRSEDGVDEEDMDFTEV* # ORIGINAL: g5308.t1 original gene structure, not modified by PASA NODE_3047_length_4455_cov_41.9441 AUGUSTUS gene 1282 4075 . + . ID=g5308;Name=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS mRNA 1282 4075 . + . ID=g5308.t1;Parent=g5308;Name=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS exon 1282 1694 . + . ID=g5308.t1.exon1;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS CDS 1282 1694 . + 0 ID=cds.g5308.t1;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS exon 1796 2859 . + . ID=g5308.t1.exon2;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS CDS 1796 2859 . + 1 ID=cds.g5308.t1;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS exon 3403 3408 . + . ID=g5308.t1.exon3;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS CDS 3403 3408 . + 2 ID=cds.g5308.t1;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS exon 3660 4075 . + . ID=g5308.t1.exon4;Parent=g5308.t1 NODE_3047_length_4455_cov_41.9441 AUGUSTUS CDS 3660 4075 . + 2 ID=cds.g5308.t1;Parent=g5308.t1 #PROT g5308.t1 g5308 MSGVRLPLVPSAPPQLATTVVRGEQTLVRAVDLSVQDAGSGSGASNGNVAVSHLSAIDAVMPRSNILVVYVYEYSLRSGDADGGCDADGGVVPISLLKDSLSHALSFYPQLAGRMRQDDCGKLSVALSNEGAVLFDASCPHPLSILLPYRTESLPDAIASKIDPIEVEQGHSPLLKIQRTRFSCGGVTIAVAMHHSLADGDAFFMFMNDLAMISRQLRTGAAVDVSIPDVVCDRSSQIPPPGAEAQHTHIEYKIGAVQPSYSLASIDKIFESLPAMRTVELLFSRAELDLMKATAAARETAADGDRETPLPPWVSTNDALVAHVWAAVTRARLADPNSAANFSPDTKCGMACNGRKRLCPPLADRFFGNSNYYACAIFPLATLASASPAVAAAAIRTAVDRMDDAYMRDARAFIYAQEDARQVMPSFNIFLGPDIAITNWANFPIYGCDYGWGRPEYVGIGSAKFDGLGIVMDAPPSLGLGGGAVKITLGLKTAVAATAVLGAFVPPQPDLMPNGFNGTFLITLPDKFSNSKATMFYDWDQKAQSVYHDLCPNPAVADRPCVIMFAGGNVYYNFPESFECCTFAKGLSPIAPTEFMDWVYQGNETMTVATSTDGQPVDTWLFAKGDFKLWDR* # PASA_UPDATE: g2430.t1, single gene model update, valid-1, status:[pasa:asmbl_4036,status:12], valid-1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . gene 935 2786 . + . ID=g2430;Name=g2430.t1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . mRNA 935 2786 . + . ID=g2430.t1;Parent=g2430;Name=g2430.t1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . five_prime_UTR 935 1115 . + . ID=g2430.t1.utr5p1;Parent=g2430.t1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . exon 935 2786 . + . ID=g2430.t1.exon1;Parent=g2430.t1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . CDS 1116 2774 . + 0 ID=cds.g2430.t1;Parent=g2430.t1 NODE_2321_length_6742_cov_49.9268_potentialcontaminant . three_prime_UTR 2775 2786 . + . ID=g2430.t1.utr3p1;Parent=g2430.t1 #PROT g2430.t1 g2430 MSDVVALGFNLLAPETVVHHIVPYLSNVDVSSLAKVNRALHAHLRQKRLYHLWPLYNRKYIEDATFREEVKATIPVGRLVLDECNRGEANADLGAFAGVYSASIDCTPVSDMAPLRDVRELVVRPFCLDVSLFVNLQRLVVHSGSIVNAALLSRVSVIELTSVEVDSLEFVNVTRVKLVSCGWPGRIDITDISGLRNVRFVTLERMESLVDVSPLANAIEVTIEECDSVSQASLLMLGGVKKLFYRPSGSPYNRFGQANSILNAVPIEFANLHTLEMASPIVDVSPLGKIHTLSLGYGKIPDTFLEKLGSVHNLTLRSCEFSLWSSEMHMLGNIHSLCLSFSNVRDVSGLGRIHTLILEHTEVEDVSALGNVHTLDLSYTRVSDVSALGQCYVLKLSSTYVHDVSMLGHVHTLELRDTKVTDCSALGSVHSLDLSFSLVKDVSMLGHVHTLRLENCNIDNVESLSRVHFLDLSMCTTVSNVSALGHVHTLLLAGTSISDLSELGNVFYLDISYCTFIEDLSPLFSVSILLAKYLNVEVDGSVLRGVRRLILY* # ORIGINAL: g9630.t1 original gene structure, not modified by PASA NODE_3467_length_3406_cov_31.3945 AUGUSTUS gene 427 3359 . - . ID=g9630;Name=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS mRNA 427 3359 . - . ID=g9630.t1;Parent=g9630;Name=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS exon 2826 3359 . - . ID=g9630.t1.exon1;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS CDS 2826 3359 . - 0 ID=cds.g9630.t1;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS exon 2289 2434 . - . ID=g9630.t1.exon2;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS CDS 2289 2434 . - 0 ID=cds.g9630.t1;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS exon 1952 2087 . - . ID=g9630.t1.exon3;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS CDS 1952 2087 . - 1 ID=cds.g9630.t1;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS exon 1194 1478 . - . ID=g9630.t1.exon4;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS CDS 1194 1478 . - 0 ID=cds.g9630.t1;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS exon 427 864 . - . ID=g9630.t1.exon5;Parent=g9630.t1 NODE_3467_length_3406_cov_31.3945 AUGUSTUS CDS 427 864 . - 0 ID=cds.g9630.t1;Parent=g9630.t1 #PROT g9630.t1 g9630 MLRQLFESVGTVTFCGISVFPSGVSRGYGFVDFATPAEAEAATVKLDYFRIQGFPMRVSPANPSKLGVNALGQSADFRGDPNPGLRMGGVGGMGMPGLSGMPGGQMGGQMGGQMGGPMGPMGGPMGGPMGGPMGGQMGPMGGPMGRGSLLPPPGAGGMQMPPGMPPGMPPGMPRNANEQRNEEMMRAQMTIMKEQQMAMDVRRREEEMARQRQMLAMQQQTQEAMQQMYAQAQMQMHMADPAFQNYYKQYMAAFGDAMQASGGLGGPLDPSQMMAAAWESYFTALQSQGMMLGGGMGAMGAMGGMGGMGGMGGMGAMGTMGGMGAMGTMGGMGAMGTMGAMHPGAMGFPMGPAFAMGGQSSKGTNFSPVGGSQVRKRPYVGQHEQGLGGMYDDDDKERERERERDRDRDRDRDVRDRGDRERDHRDRDVGHRDRDRERGDRERGERADRADRGERDRDRSDKERAPAESRAPRTKTDDRDGGAREAREARDARDRKDRRDGGDDRDARKPRR* # PASA_UPDATE: g6849.t1, single gene model update, valid-1, status:[pasa:asmbl_8910,status:12], valid-1 NODE_695_length_18941_cov_43.1633 . gene 15679 17776 . + . ID=g6849;Name=g6849.t1 NODE_695_length_18941_cov_43.1633 . mRNA 15679 17776 . + . ID=g6849.t1;Parent=g6849;Name=g6849.t1 NODE_695_length_18941_cov_43.1633 . exon 15679 15723 . + . ID=g6849.t1.exon1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . CDS 15679 15723 . + 0 ID=cds.g6849.t1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . exon 16184 16243 . + . ID=g6849.t1.exon2;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . CDS 16184 16243 . + 0 ID=cds.g6849.t1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . exon 16573 16767 . + . ID=g6849.t1.exon3;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . CDS 16573 16767 . + 0 ID=cds.g6849.t1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . exon 17020 17192 . + . ID=g6849.t1.exon4;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . CDS 17020 17192 . + 0 ID=cds.g6849.t1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . exon 17582 17776 . + . ID=g6849.t1.exon5;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . CDS 17582 17600 . + 1 ID=cds.g6849.t1;Parent=g6849.t1 NODE_695_length_18941_cov_43.1633 . three_prime_UTR 17601 17776 . + . ID=g6849.t1.utr3p1;Parent=g6849.t1 #PROT g6849.t1 g6849 MSVAFPCVVYFFYKKMEALYGLPFAVLRVPSLRLRAPRIEHPPAFAVFGFIVFSYFLITGGIIYDIIVEPPSIGSTVDENGNQKPVAFMQYRINGQYIVEGLSAAFMFVLGAGGFMLLDKTNGKTTPTLTRFILISTSLLSIAISLLMCRVFIRMKLPGYLIE* # ORIGINAL: g6847.t1 original gene structure, not modified by PASA NODE_695_length_18941_cov_43.1633 AUGUSTUS gene 6347 12113 . - . ID=g6847;Name=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS mRNA 6347 12113 . - . ID=g6847.t1;Parent=g6847;Name=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 10318 12113 . - . ID=g6847.t1.exon1;Parent=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 10318 12113 . - 0 ID=cds.g6847.t1;Parent=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 6617 10091 . - . ID=g6847.t1.exon2;Parent=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 6617 10091 . - 1 ID=cds.g6847.t1;Parent=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 6347 6439 . - . ID=g6847.t1.exon3;Parent=g6847.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 6347 6439 . - 0 ID=cds.g6847.t1;Parent=g6847.t1 #PROT g6847.t1 g6847 MDGTTGAHPLANANDAVDFTLRQCETQPRHHPQMPFVPNATGTPQRPLSATNMQQQPRPSSAGVRLPPLRGHNWDAWIESASQSLADRLHKERKCHVRVFLSSPFSGMEGERELFTRRYLPQLRHLTARAGLHFTALDLRWGVTETSSNEAETLRICLRELDISDIFVGFYGSRYGWHHRPDACKRDALLDRNFDLICNEFPWTQPLRETASATHLEFTSAMQHAGDPLRRLPAMFFFRDAAWDERTATTCAQADRFKYVAESDFASSRLSSLKENVLKHPDCHVTEDYADPADGAARMFSAIRDLLDLTLRKLKDLALSARGDGASNDDETPSHDAFALSRQLLSTGMSAYMEHIERHFGIRAEGDERDGERDSGMMSSSPYVALTGTILTPTTATTATSTPPAAAAPSVPTRGDDATSATPTPLIVCAESGMGKSSLLAKFALGMGSREGVRVFYHAIGCTEPSTRPENILQRLCKFLTAIVNSSDSEKANNDENKSNDNSNTVVRSEKQPERAAFSEDLRLKAVGALLKSIKSQGIVVYVVIDGLDQVASVHGNEERLSWLPFQWWSARVLLSVAADTRAHVVVGKRCYNTLAMQRWDTAQVETFVGSSLKSTGKQLSQTQRSRIVTAEQCTLPLFLSLLMDELVSTGTYETIDTQIDALVACKNATDLFEAIVRRLVADFSMEKRSRDASDADAPHPGEESSGEVPMTPEDRSDHAVAGSNPVAVVLTAIAASRIGLSESELSSMFDFGVGWLSPVLYALRSHLVSSSGLFVFNHQQLRRAVMRMYMPAHYEAATNDTARTGGAQQGSQERTSEPMTLVPAFLPFAKTVVESIVGYFTGALATGSIPTKRIADELVWALASLGEDRVPSLRAVLLDLRVLTLLRDTDMLYVVRAWTALGPEVMATAYREALVRDGDSVADCYYTAMVAQGFHIPKDQVWASDSTARNAFVVSAMYMLVGKAVVSVGSSDAALPFLQHALTLREKYLGDASPYLATACQMLAACHLRTASPSSTAHASALAGRAMSVAEIYFGKESAELIPFLVLLANVRRIEGRLDDAICALERGMDLLQQSAYGVSRSEMAMSQLGMELMWMYLQVRSVQGKIDDAVAMAVDILAGMESMFGSDSPYIASYLQSTASLLVSAEAFDRALPYAIRAVDISRRNSLVDTALHVRTLGTVYAGLRQIDRALEQFHDALRMYESIYGPGCKEGIQVVNDIASCLMTHRRLDEAEEWVLRAVKMSVQAFGETHISTLYAKRIQASWCMRVGKPDDAVAVLTEVAAEFASTYGKKHPFGVGVLAELAVATVAAKGGSTESVEMAKAAYDAAVEALGPTSKEALGGLYALGEAHLGNGDAHAAARAFQRIVECNTAFGSTSAMAQVLMRLCEAQLNRACGNEALVAIENVHAIQSSFATPVFEECTVAASRCAALLQCAKPLDVIACASKVISTVNVTGGLDCLGRQTFSFAWIMALRATALCDIGEYADAMADCNAVLSLPEKRLSDMVVSHLLAVTAAMRAAVGLGECECALRAANVALRLLRSGFNKGIHSAVAHAAIGETLARVAVREADRRVTDITEHQQQQQQHQHQHQQQHQQQERQLSSQDAAPIIPQSCLFEETSENTFRECVGSPSAAASEARKQLALAVDILTTDARMDRDGPCCMLLRNHVSALLALTDALECAVGTSGRNGPSDAIGTEGDDLTVLPSVVQAGVAALEKVLSLGAAAHCGRDEYATSSLRLTMATALCYVRTAGVEQSYLARLTLMGATSTSTRTARVAADRLLAF* # ORIGINAL: g6845.t1 original gene structure, not modified by PASA NODE_695_length_18941_cov_43.1633 AUGUSTUS gene 82 2008 . - . ID=g6845;Name=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS mRNA 82 2008 . - . ID=g6845.t1;Parent=g6845;Name=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 1799 2008 . - . ID=g6845.t1.exon1;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 1799 2008 . - 0 ID=cds.g6845.t1;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 1351 1443 . - . ID=g6845.t1.exon2;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 1351 1443 . - 0 ID=cds.g6845.t1;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 961 1026 . - . ID=g6845.t1.exon3;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 961 1026 . - 0 ID=cds.g6845.t1;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 82 311 . - . ID=g6845.t1.exon4;Parent=g6845.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 82 311 . - 0 ID=cds.g6845.t1;Parent=g6845.t1 #PROT g6845.t1 g6845 MASENPVLKAVLWDYDAASIGLMFTIPHGDLVALVPSIVERVYEIAAAGDFPTNHPLAQTIAETSMSLLQAGAAQTPEIRTENVDVLVDFIRKLIAFDMKKASHMDSNPRSQLALSAFQILATDITKAAVARKVVPILCEMGTKNNSDFDSQMSYLSIAVTTVPQTVAENAEFLVNRALNGPHIGRANMYSALAGVYNF # ORIGINAL: g6846.t1 original gene structure, not modified by PASA NODE_695_length_18941_cov_43.1633 AUGUSTUS gene 3886 5463 . + . ID=g6846;Name=g6846.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS mRNA 3886 5463 . + . ID=g6846.t1;Parent=g6846;Name=g6846.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS exon 3886 5463 . + . ID=g6846.t1.exon1;Parent=g6846.t1 NODE_695_length_18941_cov_43.1633 AUGUSTUS CDS 3886 5463 . + 0 ID=cds.g6846.t1;Parent=g6846.t1 #PROT g6846.t1 g6846 MANMSHSSASLLTLPVEVVESHIVPFLSNTDRASLARVNSSLRSVLVRMRTYILRHTFCMRFCVSAEFRNAVLAFIPKERIVLEWSLRKLDSVDASVLGDVHTLNLSHCAVTDVSVLGGVHTLDLSHCEGVTDVSALGGVSSLDLSYCEGVTDVSELGGVRALNLSHCEGVTDVSALGGVHSLDLSVCSKVVDVSALGAVHTLNLHKCTGVTDVSALGGVHSLGLFYCEKVVDVSALGAVHTLNLSGCSRVVDVSALGAVHTLILHKCKGVTDVSALSGVHTLDLSYCDGVADVSALGGVHTLNFCMCVRVTKVSALGGVHSLNLSYCERVMNVAALGAVHMLNLHKCTRVTDVSALAAVHTLDLSRCERLSDASALGGVHTLNLSYCKRLTDVSALGGVYWLRLVNCNQVKDVSALGGVHTLTLSLCSGVSDVSALGAVYALNLSQCFGVTDVSALGGVHSLDLSHCKGISNVSALGSVYMLDISFCDGVMDVSSLGGVHTLNLSQCKGVTDVSALSDVHRLIR* # PASA_UPDATE: g6848.t1, single gene model update, valid-1, status:[pasa:asmbl_8909,status:12], valid-1 NODE_695_length_18941_cov_43.1633 . gene 12745 15439 . + . ID=g6848;Name=g6848.t1 NODE_695_length_18941_cov_43.1633 . mRNA 12745 15439 . + . ID=g6848.t1;Parent=g6848;Name=g6848.t1 NODE_695_length_18941_cov_43.1633 . exon 12745 12847 . + . ID=g6848.t1.exon1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . CDS 12745 12847 . + 0 ID=cds.g6848.t1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . exon 12968 13075 . + . ID=g6848.t1.exon2;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . CDS 12968 13075 . + 2 ID=cds.g6848.t1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . exon 13173 13331 . + . ID=g6848.t1.exon3;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . CDS 13173 13331 . + 2 ID=cds.g6848.t1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . exon 13562 14668 . + . ID=g6848.t1.exon4;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . CDS 13562 14668 . + 2 ID=cds.g6848.t1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . exon 15076 15439 . + . ID=g6848.t1.exon5;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . CDS 15076 15269 . + 2 ID=cds.g6848.t1;Parent=g6848.t1 NODE_695_length_18941_cov_43.1633 . three_prime_UTR 15270 15439 . + . ID=g6848.t1.utr3p1;Parent=g6848.t1 #PROT g6848.t1 g6848 MCIDKIKALRGSATVTLIVVFIALFVDYTLTTIIVPIIPIYLEELNVTESKIGILFASKAMAQLAVQPAIGPLSDAFGRTVPMFAGFVILVGSTVMFALGTTYWQLILARSIQGIGSACTATAGMAILADIHTDETARGAAMGKALGGLALGVLVGPPLGGVLYHFGGKLLPFMFVAGLGVFDGILQLIFLRPSCGRQRRMPRVVAVVQSTNRCAAAADDSCSVASESIGGDSQYAGMCDSTTDADSIGKLPSGSVLGRRGTIKYMRDLSSSAEDNFGVADGDGANVHVGDQHSNDGSGKEYDSNERGALLDGAGMASSHEVLDDGESCEEIETRGAERTSFFTLIRDPYILIAVGGVVVSGSTVALLEPALAPHINDVMGIGPLYAGLIFASATMSYAVLNPFVGGLGHRFGRWFVGMVGLLVLAASFPLIALPRTWPLLLPPLIGVGMGMSLVDSTLMPLLATIVDVRHKDAYGSVYAICDMGSALGFVIGPTVGTTLVEHIGFAWALRCLAFVSAGYAPLLFFLRSLSHERQLDARIDAIADGKEDEIKPLLG* # ORIGINAL: g2850.t1 original gene structure, not modified by PASA NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS gene 222 682 . + . ID=g2850;Name=g2850.t1 NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS mRNA 222 682 . + . ID=g2850.t1;Parent=g2850;Name=g2850.t1 NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS exon 222 307 . + . ID=g2850.t1.exon1;Parent=g2850.t1 NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS CDS 222 307 . + 0 ID=cds.g2850.t1;Parent=g2850.t1 NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS exon 430 682 . + . ID=g2850.t1.exon2;Parent=g2850.t1 NODE_5918_length_682_cov_47.374_potentialcontaminant AUGUSTUS CDS 430 682 . + 1 ID=cds.g2850.t1;Parent=g2850.t1 #PROT g2850.t1 g2850 MGKQRSSLTLTRRALMRSSSPSPVKTLNCDRVARGDLFGDEHAGRVVADIQFFSQASAVAAVNAAFGLAAQAVSFEGPLASIAARIPADILPLLSKLGNRCTAPTLVRFIDWA # ORIGINAL: g3113.t1 original gene structure, not modified by PASA NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS gene 76 788 . + . ID=g3113;Name=g3113.t1 NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS mRNA 76 788 . + . ID=g3113.t1;Parent=g3113;Name=g3113.t1 NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS exon 76 328 . + . ID=g3113.t1.exon1;Parent=g3113.t1 NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS CDS 76 328 . + 1 ID=cds.g3113.t1;Parent=g3113.t1 NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS exon 630 788 . + . ID=g3113.t1.exon2;Parent=g3113.t1 NODE_5131_length_1007_cov_28.6395_potentialcontaminant AUGUSTUS CDS 630 788 . + 0 ID=cds.g3113.t1;Parent=g3113.t1 #PROT g3113.t1 g3113 YEAIRAQWSAGGSSASDIVGGHQIHAPTHDTARFKRRVSRIEKDVVRTDRNLSYFAGDHNANLGTLRELLVTYAVHDPDLGYVQGMSDLLSPLLRTLRDTALTFWCYVSMMGELRNSFDRNQATMHSDISVLRRLVQ # ORIGINAL: g7948.t1 original gene structure, not modified by PASA NODE_796_length_17608_cov_54.0945 AUGUSTUS gene 181 803 . - . ID=g7948;Name=g7948.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS mRNA 181 803 . - . ID=g7948.t1;Parent=g7948;Name=g7948.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 597 803 . - . ID=g7948.t1.exon1;Parent=g7948.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 597 803 . - 0 ID=cds.g7948.t1;Parent=g7948.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 181 493 . - . ID=g7948.t1.exon2;Parent=g7948.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 181 493 . - 0 ID=cds.g7948.t1;Parent=g7948.t1 #PROT g7948.t1 g7948 MKLKPFVFATTADATPFSTDYASFRETAAPIVIDNGSYACRAGWAGESQPRMRFRNIVGRIKGKKEDGDVSYVGNDVRDAESSKWSIRSPFERDVVVNYATQEEVLDHVFQRLGVDGANDRVGHPVVVTECIANPNSCRRLMSELLFECYGCPSVAYGVDALFSYAGEMADLS # PASA_UPDATE: g7950.t1, single gene model update, valid-1, status:[pasa:asmbl_9416,status:3], valid-1 NODE_796_length_17608_cov_54.0945 . gene 6669 8616 . - . ID=g7950;Name=g7950.t1 NODE_796_length_17608_cov_54.0945 . mRNA 6669 8616 . - . ID=g7950.t1;Parent=g7950;Name=g7950.t1 NODE_796_length_17608_cov_54.0945 . five_prime_UTR 8299 8616 . - . ID=g7950.t1.utr5p1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 8288 8616 . - . ID=g7950.t1.exon1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 8288 8298 . - 0 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 8083 8185 . - . ID=g7950.t1.exon2;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 8083 8185 . - 1 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 7772 7888 . - . ID=g7950.t1.exon3;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 7772 7888 . - 0 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 7535 7671 . - . ID=g7950.t1.exon4;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 7535 7671 . - 0 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 7218 7354 . - . ID=g7950.t1.exon5;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 7218 7354 . - 1 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 6916 7118 . - . ID=g7950.t1.exon6;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 6916 7118 . - 2 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . exon 6669 6789 . - . ID=g7950.t1.exon7;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . CDS 6691 6789 . - 0 ID=cds.g7950.t1;Parent=g7950.t1 NODE_796_length_17608_cov_54.0945 . three_prime_UTR 6669 6690 . - . ID=g7950.t1.utr3p1;Parent=g7950.t1 #PROT g7950.t1 g7950 MSDRDDDPAVGDAAGWRSLALELREELQESKDALEEFQESSRELEAELESQLNQSEAKVKELKQSAERAARESESLREKLQALQSESNRTVAECGRLRTENENLLSRVRSLEQANDDLERAERVAVASASDSESRTLAALERLALMEAQNEEHEATHIELQRLKDELRDLRMELELRPAIGFAATVNERPIDMHAEAIAPSTPTRTKDAAPPTATPSPSGPRNILSALNSILARMTKFEQRISTAKETTGAAADGGESSARRLSMPPS* # PASA_UPDATE: g7952.t1, single gene model update, valid-1, status:[pasa:asmbl_9414,status:3], valid-1 # PASA_UPDATE: g7952.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9415,status:12], valid-1 NODE_796_length_17608_cov_54.0945 . gene 14519 17583 . + . ID=g7952;Name=g7952.t1 NODE_796_length_17608_cov_54.0945 . mRNA 14519 17583 . + . ID=g7952.t1;Parent=g7952;Name=g7952.t1 NODE_796_length_17608_cov_54.0945 . five_prime_UTR 14519 14575 . + . ID=g7952.t1.utr5p1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . five_prime_UTR 14865 15082 . + . ID=g7952.t1.utr5p2;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . exon 14519 14575 . + . ID=g7952.t1.exon1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . exon 14865 16318 . + . ID=g7952.t1.exon2;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . CDS 15083 16318 . + 0 ID=cds.g7952.t1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . exon 16561 16784 . + . ID=g7952.t1.exon3;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . CDS 16561 16784 . + 0 ID=cds.g7952.t1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . exon 16961 17583 . + . ID=g7952.t1.exon4;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . CDS 16961 17471 . + 1 ID=cds.g7952.t1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . three_prime_UTR 17472 17583 . + . ID=g7952.t1.utr3p1;Parent=g7952.t1 NODE_796_length_17608_cov_54.0945 . mRNA 14536 17543 . + . ID=g7952.t1.1.5b6be70c;Parent=g7952;Name=g7952.t1 NODE_796_length_17608_cov_54.0945 . five_prime_UTR 14536 14575 . + . ID=g7952.t1.1.5b6be70c.utr5p1;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . five_prime_UTR 14859 15082 . + . ID=g7952.t1.1.5b6be70c.utr5p2;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . exon 14536 14575 . + . ID=g7952.t1.1.5b6be70c.exon1;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . exon 14859 16318 . + . ID=g7952.t1.1.5b6be70c.exon2;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . CDS 15083 16318 . + 0 ID=cds.g7952.t1.1.5b6be70c;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . exon 16561 16784 . + . ID=g7952.t1.1.5b6be70c.exon3;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . CDS 16561 16784 . + 0 ID=cds.g7952.t1.1.5b6be70c;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . exon 16961 17543 . + . ID=g7952.t1.1.5b6be70c.exon4;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . CDS 16961 17471 . + 1 ID=cds.g7952.t1.1.5b6be70c;Parent=g7952.t1.1.5b6be70c NODE_796_length_17608_cov_54.0945 . three_prime_UTR 17472 17543 . + . ID=g7952.t1.1.5b6be70c.utr3p1;Parent=g7952.t1.1.5b6be70c #PROT g7952.t1 g7952 MPTFSLKTGVGLAVVLLGLGLTAHFIIVQKRTEELTAQLIGEGSNVQDPNENPEISELLAQGHLIPPMLESLLRIEWRYSMARIKRPTILMRGVNWVIGRDEETYGKATRSNNVRIVRSGSLSSVAGVLCVGIGDLDEECVSANRYQSMTAFQRISRLHGLRQILWTKDGFCNTINYALSGFKDNFKGLVMQPFTFPCFTLPDQYRALETYANAKQAETPVGETLKWIVKPTDRGAGIGIYVVDSLQPLDELRKEGAFLIVQPYMNDPYLIDGYKFDLRTYVLVTSISPLRIYMYKEGLVRFASSKYDANATRGGDPTQFLTNTSINKKFKDVNELVWNFEKFKNYLTKVGEDPDEIYRRIYEAVVKVFISAEPAFRRHFQTMGKGYTCTQCYQLMGVDVIFDELLRPKVIEVNGSPDMHLSHQDGSTYDSTKVGMMTNVIAMNYGRSNKLANTVYREVRDLGMFRASQKECQKAKPFSFEFTLAQWNHARYADSWDESQSDVFFAGSSRRFDDNAQVQDESADSELGSDNVAAKAAAPADINAAEYWQCVDDAEINLVLTTRRELEKAGGFVRIYPSRLTGNSASVVSLLSHVALKLPQGTKGTYYYHPVQMAMIGAQERVAQRLADVENLRAEQAFAAAEAKSVRAATEVKLAK* #PROT g7952.t1.1.5b6be70c g7952 MPTFSLKTGVGLAVVLLGLGLTAHFIIVQKRTEELTAQLIGEGSNVQDPNENPEISELLAQGHLIPPMLESLLRIEWRYSMARIKRPTILMRGVNWVIGRDEETYGKATRSNNVRIVRSGSLSSVAGVLCVGIGDLDEECVSANRYQSMTAFQRISRLHGLRQILWTKDGFCNTINYALSGFKDNFKGLVMQPFTFPCFTLPDQYRALETYANAKQAETPVGETLKWIVKPTDRGAGIGIYVVDSLQPLDELRKEGAFLIVQPYMNDPYLIDGYKFDLRTYVLVTSISPLRIYMYKEGLVRFASSKYDANATRGGDPTQFLTNTSINKKFKDVNELVWNFEKFKNYLTKVGEDPDEIYRRIYEAVVKVFISAEPAFRRHFQTMGKGYTCTQCYQLMGVDVIFDELLRPKVIEVNGSPDMHLSHQDGSTYDSTKVGMMTNVIAMNYGRSNKLANTVYREVRDLGMFRASQKECQKAKPFSFEFTLAQWNHARYADSWDESQSDVFFAGSSRRFDDNAQVQDESADSELGSDNVAAKAAAPADINAAEYWQCVDDAEINLVLTTRRELEKAGGFVRIYPSRLTGNSASVVSLLSHVALKLPQGTKGTYYYHPVQMAMIGAQERVAQRLADVENLRAEQAFAAAEAKSVRAATEVKLAK* # PASA_UPDATE: g7951.t2, single gene model update, valid-1, status:[pasa:asmbl_9417,status:12],[pasa:asmbl_9418,status:13], valid-1 # ORIGINAL: g7951.t1 original gene structure, not modified by PASA NODE_796_length_17608_cov_54.0945 . gene 9325 13554 . + . ID=g7951;Name=g7951.t1 NODE_796_length_17608_cov_54.0945 . mRNA 12270 13554 . + . ID=g7951.t2;Parent=g7951;Name=g7951.t1 NODE_796_length_17608_cov_54.0945 . exon 12270 13554 . + . ID=g7951.t2.exon1;Parent=g7951.t2 NODE_796_length_17608_cov_54.0945 . CDS 12270 13409 . + 0 ID=cds.g7951.t2;Parent=g7951.t2 NODE_796_length_17608_cov_54.0945 . three_prime_UTR 13410 13554 . + . ID=g7951.t2.utr3p1;Parent=g7951.t2 NODE_796_length_17608_cov_54.0945 . mRNA 9325 13554 . + . ID=g7951.t1;Parent=g7951;Name=g7951.t1 NODE_796_length_17608_cov_54.0945 . exon 9325 9384 . + . ID=g7951.t1.exon1;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . CDS 9325 9384 . + 0 ID=cds.g7951.t1;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . exon 9570 11578 . + . ID=g7951.t1.exon2;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . CDS 9570 11578 . + 0 ID=cds.g7951.t1;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . exon 11759 13554 . + . ID=g7951.t1.exon3;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . CDS 11759 13409 . + 2 ID=cds.g7951.t1;Parent=g7951.t1 NODE_796_length_17608_cov_54.0945 . three_prime_UTR 13410 13554 . + . ID=g7951.t1.utr3p1;Parent=g7951.t1 #PROT g7951.t2 g7951 MGVGVGVGMGRPAVGLGAASYAMGGFAASSAGGKPPVGYICNKCRQPGHYIKDCPTATRATNAAAPPIGYICKKCNVPGHFIQNCPTALAQRSAGVTQTSIGMGMGMGMGMGASAGAGANYGAKFGGGTQYGQYGQQQQQQQQQQQQFQQATTQNAYGAYANSFGYGATPATTPQQSFGAYGYALGAGGAMGNTTAATTASWPYGQSYGAKGTGVNTTAQQTQMNQYQQQQQQQQAQTQQQQQYGAYQSAYGGMGMGMGAGMGMGAGMGGMGAGMGMGGMGSGMATGMASGMGGGRTSVSGSSGGAPPPGYLCKKCNIPGHYIKDCTSNTTTAPPTGYVCRICNIPGHMIQNCPQKSFNGGNAAGMNSGMMGGYNNMMY* #PROT g7951.t1 g7951 MATQPAKRKLEDDGLDVPSKIARGESASQGWALETHYRTVLSSNPFGAQPTPSSPPLAYTDIETYLAAQGASLDAAAVQDAHRGLESAFMDQSQSLPVTIDSVEFMGGFASVTLLPVNEGEQNASAQNDLPFGPYDVLLLATEPITSAKEAPSAFLLALVETNVPAVVVRTVSSGGNDARIQRGAQQLVAGARWHAIVISNAASSASKADLLANARYVPLLLASLQPSTAPAVDATPELPEDSVDLVSGADVLDADQRAAMTAALALADGFLVVQGGPATGKTTLLAHLSIAYSSQLSRRTKYVAQPPAADHDADRAEVSARIATAPRRVVALAASGGEVDALLSHYIKIKSRLDIPAPTEDDLLARAGFASPRSVRIGVSNSAEAGVRALSLEEVVDSVLSATQDADALEARMGRVSEERARLASTGENLRSLRDLECEAMVLAECAAIHKAGGPLSADADGLRTALLLVADIVFAAAQDAAYSGRETAVLLVDSADRIGEVDVLLAAGFASRAVLVGLLKPNLIDGSADLACINAGSALAPASTLFGRLVGRSHPTAKLGVQHRMLSDLSQFLRSGVYNSSLADGPEAAAAFTLKGCSAYTVQDVVGPAPTASMESDEEARTCVSVYSTTLGLNAADLRATSFAILTPYSAQKSRIMAELASQQQGAQEMPVVATVSEFRGHEADVVILSVVGVSTTFPFSSSDFAMALSRAKRALFIICGATVTSSPLWAACIADAKKRNRHLSSAARRTSGTTGASATTTTARTSVSSISLLAPPQQRSLPPSHYVCHKCQLPGHWIQYCPLANVATPPAGYLCRKCNMPGHYIKDCPMGAGAALRMGAVGAATGLAMRAAMPRGSMGVGVGVGMGRPAVGLGAASYAMGGFAASSAGGKPPVGYICNKCRQPGHYIKDCPTATRATNAAAPPIGYICKKCNVPGHFIQNCPTALAQRSAGVTQTSIGMGMGMGMGMGASAGAGANYGAKFGGGTQYGQYGQQQQQQQQQQQQFQQATTQNAYGAYANSFGYGATPATTPQQSFGAYGYALGAGGAMGNTTAATTASWPYGQSYGAKGTGVNTTAQQTQMNQYQQQQQQQQAQTQQQQQYGAYQSAYGGMGMGMGAGMGMGAGMGGMGAGMGMGGMGSGMATGMASGMGGGRTSVSGSSGGAPPPGYLCKKCNIPGHYIKDCTSNTTTAPPTGYVCRICNIPGHMIQNCPQKSFNGGNAAGMNSGMMGGYNNMMY* # ORIGINAL: g7949.t1 original gene structure, not modified by PASA NODE_796_length_17608_cov_54.0945 AUGUSTUS gene 1450 6575 . + . ID=g7949;Name=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS mRNA 1450 6575 . + . ID=g7949.t1;Parent=g7949;Name=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 1450 2178 . + . ID=g7949.t1.exon1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 1450 2178 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 2287 2325 . + . ID=g7949.t1.exon2;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 2287 2325 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 2489 2627 . + . ID=g7949.t1.exon3;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 2489 2627 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 2901 3100 . + . ID=g7949.t1.exon4;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 2901 3100 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 3298 3387 . + . ID=g7949.t1.exon5;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 3298 3387 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 3548 3635 . + . ID=g7949.t1.exon6;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 3548 3635 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 3959 4099 . + . ID=g7949.t1.exon7;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 3959 4099 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 4337 4426 . + . ID=g7949.t1.exon8;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 4337 4426 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 4590 4729 . + . ID=g7949.t1.exon9;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 4590 4729 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 4853 5073 . + . ID=g7949.t1.exon10;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 4853 5073 . + 0 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 5294 5442 . + . ID=g7949.t1.exon11;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 5294 5442 . + 1 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 5588 5761 . + . ID=g7949.t1.exon12;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 5588 5761 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS exon 5890 6575 . + . ID=g7949.t1.exon13;Parent=g7949.t1 NODE_796_length_17608_cov_54.0945 AUGUSTUS CDS 5890 6575 . + 2 ID=cds.g7949.t1;Parent=g7949.t1 #PROT g7949.t1 g7949 MGTQRSDRERGPGRKSRKQGEPVVIGEDGKRERSNKFNRSPRQQRGGKGPVAGGRDGGSRGNGRPNSAGRGRGRGRGASTSPGRAPPQKPQQQQKGKLNGKSPAKKQESDSDDDDDEEDEEEELDGDEEMVDADDSEDEEMGGDDDEEDDEEEEDEDEEEELDGDGEMVDADQFAAVDADKGRKRSAKAALLDSSDDDEDDDPKLKSKTFSDNNKAWLKPKGKKAGSEDDEEDEDDEGEDDEEDDDEDDDEEDDDEFDIEKRSRKLDRKKAKDMELGEEELQTNIAETARFVLPSGQEIEKEALETPDMGLVQQRMRDVLQVLGDFKNQRDANKSRSDYVELLTRDLAQYYGYSTYLMEKWVHLFPLSEITDFLEANEAQRPLTIRANTLKTRRRDVAQALINRGVNLDPVGKWSKVGLVVYDSQVPIGATPEYLAGHYMIQSASSFLPVMALAPQENERVLDMCAAPGGKTTYIAALMKNTGFVLANDANKERTKALVANIHRLGVHNSVVCNYDGRAFPKVMGGFDRILLDAPCSGTGVIAKDPSVKLNKTERDLQRCTHIQKELILHAIDSIDANSKTGGYLVYSTCSITVEENEWVVDYALKMRHVKLVPTGLDFGQEGFTSFRERRFHQSLNLTRRYYPHVHNMDGFYVAKLKKLSNAIPAHAQDEENGEGSSSSDSEDENGRKKKKDAKKGKVARGQSPDFDENAGDFGDDGEDGMEGVEHEFEEKPDSKVKQAAKKRKIEVPDYTSETAPIHLNKAAPGAGGKGKKPSIAAAAPAPAPAVKQAPKEAAKQTRKEAPKEAGKAKVHAVVAAAVPATAKLAKPEETKTKESAAKKEKAAPAPAAAPSAVPKPAKAAKAEEPKPKTKEPKGTEPEARKDKVAPATAPVAVQNKGQKQQEKSAAQKPQSQAQSQAQPKKKEEVKSAPAPAPAPAPASKNAPAPSSGKAQPKPSKPKAK* # PASA_UPDATE: g5879.t1, single gene model update, valid-1, status:[pasa:asmbl_2758,status:3], valid-1 NODE_1832_length_9004_cov_44.0226 . gene 6367 8165 . - . ID=g5879;Name=g5879.t1 NODE_1832_length_9004_cov_44.0226 . mRNA 6367 8165 . - . ID=g5879.t1;Parent=g5879;Name=g5879.t1 NODE_1832_length_9004_cov_44.0226 . five_prime_UTR 8097 8165 . - . ID=g5879.t1.utr5p1;Parent=g5879.t1 NODE_1832_length_9004_cov_44.0226 . five_prime_UTR 7915 7970 . - . ID=g5879.t1.utr5p2;Parent=g5879.t1 NODE_1832_length_9004_cov_44.0226 . exon 8097 8165 . - . ID=g5879.t1.exon1;Parent=g5879.t1 NODE_1832_length_9004_cov_44.0226 . exon 6367 7970 . - . ID=g5879.t1.exon2;Parent=g5879.t1 NODE_1832_length_9004_cov_44.0226 . CDS 6901 7914 . - 0 ID=cds.g5879.t1;Parent=g5879.t1 NODE_1832_length_9004_cov_44.0226 . three_prime_UTR 6367 6900 . - . ID=g5879.t1.utr3p1;Parent=g5879.t1 #PROT g5879.t1 g5879 MRFGLLFVAAALLLAEVVRADITCPDDESSCPDGYTCCLLAGGAYGCCPLPDATCCSDNVHCCPSGTTCNVAAGSCDSAEQPGLRLPLSRKQPAMKLVGNTACADGKSACADGYTCCLLASGDYGCCPHANATCCDDHVHCCPGGYTCDVAAGACTLGSKSTIALTKVPAINSESVPCPDGKSACADGQTCCVLEDGAYGCCAQADATCCDDHVHCCPSGYDCDLGIGICVRKAHIVDVVAVPAVVLEKASSKKNAVVAANVKSVVCSDTRYACDDGTTCCMQPSGEYSCCPLANAVCCSDHVHCCPVGYYCDLSAGTCRSTFDVVAFVKKTSAKVY* # PASA_UPDATE: g5878.t1, single gene model update, valid-1, status:[pasa:asmbl_2756,status:3], valid-1 NODE_1832_length_9004_cov_44.0226 . gene 4112 6246 . + . ID=g5878;Name=g5878.t1 NODE_1832_length_9004_cov_44.0226 . mRNA 4112 6246 . + . ID=g5878.t1;Parent=g5878;Name=g5878.t1 NODE_1832_length_9004_cov_44.0226 . five_prime_UTR 4112 4224 . + . ID=g5878.t1.utr5p1;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . five_prime_UTR 4464 4464 . + . ID=g5878.t1.utr5p2;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . exon 4112 4224 . + . ID=g5878.t1.exon1;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . exon 4464 4609 . + . ID=g5878.t1.exon2;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . CDS 4465 4609 . + 0 ID=cds.g5878.t1;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . exon 4799 4909 . + . ID=g5878.t1.exon3;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . CDS 4799 4909 . + 2 ID=cds.g5878.t1;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . exon 5403 6246 . + . ID=g5878.t1.exon4;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . CDS 5403 5692 . + 2 ID=cds.g5878.t1;Parent=g5878.t1 NODE_1832_length_9004_cov_44.0226 . three_prime_UTR 5693 6246 . + . ID=g5878.t1.utr3p1;Parent=g5878.t1 #PROT g5878.t1 g5878 MGNFASLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARDELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSQQLKNQKR* # PASA_UPDATE: g5877.t1, single gene model update, valid-1, status:[pasa:asmbl_2757,status:3], valid-1 NODE_1832_length_9004_cov_44.0226 . gene 605 3348 . - . ID=g5877;Name=g5877.t1 NODE_1832_length_9004_cov_44.0226 . mRNA 605 3348 . - . ID=g5877.t1;Parent=g5877;Name=g5877.t1 NODE_1832_length_9004_cov_44.0226 . five_prime_UTR 3207 3348 . - . ID=g5877.t1.utr5p1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 2688 3348 . - . ID=g5877.t1.exon1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 2688 3206 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 2246 2515 . - . ID=g5877.t1.exon2;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 2246 2515 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 1980 2114 . - . ID=g5877.t1.exon3;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 1980 2114 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 1389 1532 . - . ID=g5877.t1.exon4;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 1389 1532 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 1045 1107 . - . ID=g5877.t1.exon5;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 1045 1107 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . exon 605 854 . - . ID=g5877.t1.exon6;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . CDS 726 854 . - 0 ID=cds.g5877.t1;Parent=g5877.t1 NODE_1832_length_9004_cov_44.0226 . three_prime_UTR 605 725 . - . ID=g5877.t1.utr3p1;Parent=g5877.t1 #PROT g5877.t1 g5877 MTASLAQQFEDAEELHDSAPDRAVVKYQAIFADPAADEESLRIKEQSIYKLGELYAKLKKATELSELMRSTRVFLGQISKAKAAKLVRTLLDHFLSLEMAHNVAVDLCQECIEWTKAEKRAYLRQALEARLIALYIDNKNYSGALALAAALLKELKKLDDKALLLEVQLLESKAYHALRNIPRARAALTSARTSANSIYCPPLLQASLDLQSGVLHAEEKDFKTAYSYFYEAFEGFDGIEHPKAVSCLKYMLLCKIMLSLSDEVNSIIGGKLALRYAGRQVEAMRSVAQAHSRRSLSEFEVHVRNFKAELQDDPIIHAHLSSLYDTLLEQNLVRIIEPFSRVEIAHVAKLIKLPVDAVENKLSKMILDKTFYGILDQGAGALYVFEESQADKTYEAALDTIQSMGSVVESLFRKAQKLS* # PASA_UPDATE: g11101.t1, single gene model update, valid-1, status:[pasa:asmbl_6635,status:12], valid-1 NODE_383_length_25189_cov_44.4918 . gene 15821 17184 . + . ID=g11101;Name=g11101.t1 NODE_383_length_25189_cov_44.4918 . mRNA 15821 17184 . + . ID=g11101.t1;Parent=g11101;Name=g11101.t1 NODE_383_length_25189_cov_44.4918 . five_prime_UTR 15821 15897 . + . ID=g11101.t1.utr5p1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . exon 15821 16012 . + . ID=g11101.t1.exon1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . CDS 15898 16012 . + 0 ID=cds.g11101.t1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . exon 16373 16604 . + . ID=g11101.t1.exon2;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . CDS 16373 16604 . + 2 ID=cds.g11101.t1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . exon 16828 16957 . + . ID=g11101.t1.exon3;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . CDS 16828 16957 . + 1 ID=cds.g11101.t1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . exon 17120 17184 . + . ID=g11101.t1.exon4;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . CDS 17120 17158 . + 0 ID=cds.g11101.t1;Parent=g11101.t1 NODE_383_length_25189_cov_44.4918 . three_prime_UTR 17159 17184 . + . ID=g11101.t1.utr3p1;Parent=g11101.t1 #PROT g11101.t1 g11101 MAALAHVVGARLTLVTHLDERIEGELFAYDKDTGFVVMKCPIANEPRKANFRMIKQTHVKEICVIGSSPASAQPLPRLSTTKLEARCETVLNQKGRLIGTNVTAEAQDIFDALQRTLPCHWNGADIVVLDEVHISPPYTVAACKHHRGAEAAYARVKKVLEGERKRLGLSK* # ORIGINAL: g11097.t1 original gene structure, not modified by PASA NODE_383_length_25189_cov_44.4918 AUGUSTUS gene 7012 8184 . - . ID=g11097;Name=g11097.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS mRNA 7012 8184 . - . ID=g11097.t1;Parent=g11097;Name=g11097.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 7012 8184 . - . ID=g11097.t1.exon1;Parent=g11097.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 7012 8184 . - 0 ID=cds.g11097.t1;Parent=g11097.t1 #PROT g11097.t1 g11097 MSADPRLARAVSSGTSSLVDSGHTAPAMHQHLQVGTRRVSRSDLPMSLKRGTQASHHFYGVDPVSTTNLTSGLASTSLTVGAQRSAATVGGMGPELDDDLRMPFNFKCVGTFKGHSAAVWSLALDQFMLFSGGSDSTIKVWDLQGLGCIRSLSGHSGPVHALVAYDGTVYSGSGDGTVRSWDVASLSHIATGDSPGGHLVCSLACNGRRVFAGTYAAIAVFEAPGLALVMEIGALGHWVRALIVEGGRLYGGSHNAVFVWDDVDLQLLRTIPTTHGSTYSLVLTDRYMVCGTYNQNIWVYDRETDAPVAPLIGHVGVVHSLARSLNGWYVFSASSDGSVKVWGMDKLLCVQTLTRHNGAVHAVAYEHQALFSASEDESIKIFQAMEGPPV* # ORIGINAL: g11095.t1 original gene structure, not modified by PASA NODE_383_length_25189_cov_44.4918 AUGUSTUS gene 1529 2770 . - . ID=g11095;Name=g11095.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS mRNA 1529 2770 . - . ID=g11095.t1;Parent=g11095;Name=g11095.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 1529 2770 . - . ID=g11095.t1.exon1;Parent=g11095.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 1529 2770 . - 0 ID=cds.g11095.t1;Parent=g11095.t1 #PROT g11095.t1 g11095 MWTAGWNARTFPANALDSGPPPVLRWSRGAVATFRAHWHAIQTDKAVGGGIPGGKCHKSVRLIPPRDYGLMSYVRDVGTSLFEQSANGVPSRLWPEALKHSPRPFCLASTLDGDTATGCFWVQPLANCTVDQDEGLPGLTTSSLIGNVVPPFWASMVLNGYVWWETPTGERLSPAPVAFRSDLSGLASWLPFLFGPTQGPIEWSVHSMARSLMFETAWVETDDVRKSIVALENTLEIKQPMLTIQIRRTDKIEDNGIVSFRAHFPSGNVPLSEYGEMVRLVENELDISFKSVLLLTDDLDSWTSRSEWLAGFRDESVVPLLNPFWLKYETLFASPEWHKKGHANLKLNVEPTMYSFHRELVADMMLAVRHGSYLIGCGSSGVSQFVAQGLGYRYMTESSWLSYFEEDHFAANL* # ORIGINAL: g11099.t1 original gene structure, not modified by PASA NODE_383_length_25189_cov_44.4918 AUGUSTUS gene 10172 13237 . + . ID=g11099;Name=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS mRNA 10172 13237 . + . ID=g11099.t1;Parent=g11099;Name=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 10172 10176 . + . ID=g11099.t1.exon1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 10172 10176 . + 0 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 10321 10486 . + . ID=g11099.t1.exon2;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 10321 10486 . + 1 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 10710 10770 . + . ID=g11099.t1.exon3;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 10710 10770 . + 0 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 10957 11000 . + . ID=g11099.t1.exon4;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 10957 11000 . + 2 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 11405 11444 . + . ID=g11099.t1.exon5;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 11405 11444 . + 0 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 11753 11838 . + . ID=g11099.t1.exon6;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 11753 11838 . + 2 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 11947 12220 . + . ID=g11099.t1.exon7;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 11947 12220 . + 0 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 12544 12642 . + . ID=g11099.t1.exon8;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 12544 12642 . + 2 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 12748 12939 . + . ID=g11099.t1.exon9;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 12748 12939 . + 2 ID=cds.g11099.t1;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 13209 13237 . + . ID=g11099.t1.exon10;Parent=g11099.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 13209 13237 . + 2 ID=cds.g11099.t1;Parent=g11099.t1 #PROT g11099.t1 g11099 MAEQAIGGARIQVLTYDNAKKTWAPAGAMGFSRVDIYHNAVQGSYRMVGRHEHDMTHTKEEADGFSELMQYAIEAQAAAPATAVSPPPPLVQPTKPINTTPIKAPDDYDDNSAAAPNSLQAQLAAAKLRKSSAAPAPQFDDRMLSASASGSFAGGTVSSAGSGAGGNMMGDLAARLAKRRTDPPAPSPPAVVSAPAPAPAPVVDPPVVDAPKLASLNNALKPRAQAVIQRRLSSSATSTPAHTPGRAAQQSVYSPAAEEPSAHFTSQAPSASSSPMSMSLGAKALSQQRRPTELSGDFLRLKNELEESFRLQLEVFKEDIIQAVIARLDAR* # PASA_UPDATE: g11096.t1, single gene model update, valid-1, status:[pasa:asmbl_6634,status:3], valid-1 NODE_383_length_25189_cov_44.4918 . gene 3767 7000 . + . ID=g11096;Name=g11096.t1 NODE_383_length_25189_cov_44.4918 . mRNA 3767 7000 . + . ID=g11096.t1;Parent=g11096;Name=g11096.t1 NODE_383_length_25189_cov_44.4918 . five_prime_UTR 3767 3848 . + . ID=g11096.t1.utr5p1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . exon 3767 4077 . + . ID=g11096.t1.exon1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . CDS 3849 4077 . + 0 ID=cds.g11096.t1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . exon 4222 5694 . + . ID=g11096.t1.exon2;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . CDS 4222 5694 . + 2 ID=cds.g11096.t1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . exon 5828 6475 . + . ID=g11096.t1.exon3;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . CDS 5828 6475 . + 2 ID=cds.g11096.t1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . exon 6675 7000 . + . ID=g11096.t1.exon4;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . CDS 6675 6901 . + 2 ID=cds.g11096.t1;Parent=g11096.t1 NODE_383_length_25189_cov_44.4918 . three_prime_UTR 6902 7000 . + . ID=g11096.t1.utr3p1;Parent=g11096.t1 #PROT g11096.t1 g11096 MAEAEAPPPVAIPETPAHIGGERFWTEVKERVAKFANLSGTSSDLEPRPFTPMYTISIMEARMKCVYDKYWKFVGEGFFHGSFNFFVDRLDASRELTVNREEFASAIYAYLARARELMRDPANWHSAHIPPMFPNMFVRKLVFRVRELVAAGTSSGTAESDSDHLSPSSQYGEDDDIRVLSLGDMHGSYGCLLNVILQLRDEGAISDDWRLLDRRTHLVFTGDFADRGFFGVEIWLTILYLMAMNPTRVFTIKANHEFGAETDFRHREAPAKLGLPHKLFPHIMWTISRTFPDMLFVGARVSFNPSLIRITPPSSSVLDAPTAKKSRFSPSLSKRKTEQQAAPPEVSASSTPRYLPAQSSVTSIEDFVVGARLAALDAHTQTVHAPQSAPTAEHMTGVADPLDGHVHGNANNAPIPAIFVEEDEASVDGTNLVHSHSDHTHHDEGVDEDDCDGVPGSMFGSLSASGDKGSSTSLASIGRPQRVDHSVVRYVVYSHGAMEPGYVPHGFLHAPISSMGDSGPKLHLVESYDRRPLLAHLDAKWPDAGIRMRAHREFAEIPLVVHSTPDEACGAGPVWNTYQNGNWLDATLRLGQMGHGVCLGPIVVRCLLEMWANDPNAKTVVLGGAQDPASPKPSWIRRAASKAAKTLSILRSVGGSVGRSGSIDHPCIYFRKPYHVEFAMNVGGHEHGKGIGVNFLADARAYGGHAVLDCCRLDDVTEHDRKQAAGLGGSDASGPTHTGTNTGRAEKAFGDRKDGGLHSGSDSGHVHPANHDLHSVGTGSHTGDFVIHKYFNMWDLVYYKLPTVSCGRVVMTPRQDGVFPVMHTDPIKDIAGFYGEPAAAALRAFQEKFGARDSEDKM* # PASA_UPDATE: g11102.t1, single gene model update, valid-1, status:[pasa:asmbl_6636,status:12], valid-1 NODE_383_length_25189_cov_44.4918 . gene 17868 24840 . + . ID=g11102;Name=g11102.t1 NODE_383_length_25189_cov_44.4918 . mRNA 17868 24840 . + . ID=g11102.t1;Parent=g11102;Name=g11102.t1 NODE_383_length_25189_cov_44.4918 . five_prime_UTR 17868 17895 . + . ID=g11102.t1.utr5p1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 17868 17931 . + . ID=g11102.t1.exon1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 17896 17931 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 18128 18259 . + . ID=g11102.t1.exon2;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 18128 18259 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 18370 18458 . + . ID=g11102.t1.exon3;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 18370 18458 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 18678 19188 . + . ID=g11102.t1.exon4;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 18678 19188 . + 1 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 19409 19509 . + . ID=g11102.t1.exon5;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 19409 19509 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 19708 19810 . + . ID=g11102.t1.exon6;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 19708 19810 . + 1 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 19951 20118 . + . ID=g11102.t1.exon7;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 19951 20118 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 20331 20432 . + . ID=g11102.t1.exon8;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 20331 20432 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 20601 20846 . + . ID=g11102.t1.exon9;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 20601 20846 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 21059 21172 . + . ID=g11102.t1.exon10;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 21059 21172 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 21620 21755 . + . ID=g11102.t1.exon11;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 21620 21755 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 21951 22092 . + . ID=g11102.t1.exon12;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 21951 22092 . + 2 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 22347 22408 . + . ID=g11102.t1.exon13;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 22347 22408 . + 1 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 22606 22771 . + . ID=g11102.t1.exon14;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 22606 22771 . + 2 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 23033 23240 . + . ID=g11102.t1.exon15;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 23033 23240 . + 1 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 23529 23604 . + . ID=g11102.t1.exon16;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 23529 23604 . + 0 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 23769 23892 . + . ID=g11102.t1.exon17;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 23769 23892 . + 2 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 24077 24351 . + . ID=g11102.t1.exon18;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 24077 24351 . + 1 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . exon 24555 24840 . + . ID=g11102.t1.exon19;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . CDS 24555 24676 . + 2 ID=cds.g11102.t1;Parent=g11102.t1 NODE_383_length_25189_cov_44.4918 . three_prime_UTR 24677 24840 . + . ID=g11102.t1.utr3p1;Parent=g11102.t1 #PROT g11102.t1 g11102 MTEGQRFFLDFKDAESDLKKLGGGKAANMWRLTSLDFCTVPDWFCVSTDAFMHFIEYNNLQGKLVVKAGADLAAYVEDVKAAFMTKPLPPDLEEGLRARLSQRPFSDHHVAVRSSGTDEDSGDHSFAGQFETYLFQKGPEQVIESLRLCWISCYSERVMQHRIDCGLPTSGSKMAVVVQMMVNSAASGVAFSRHPLKAVSVGCVFVEAVYGLGEGLVSGEIEPDSFEIMRNDWKVTKELVDKPHAMLRAPDGGLIKADVAVEKQKVPAISDEHAVQIAKLMVQLEERMGRPQDFEWGIEDDGKLYCLQARPIVTLPPNPFFDNKVLGDFTILWDNSNIVESYSGVTTPLTFSFASLAYELVYTCALSVGGVPPEIIKEYKPYLSNMLGLVRGNIYYNLMNWYRALSCVPIGGDKSKFMETMLGVKQELDPSLERQLGTIAESAPKYSIARKIRVIWSVLYNVYYIDNLVANFFKNFNAHYEKARRTNYDALPLDKQIGVIRDLFENIIHKWETPIINDTYVMLFFGQLKKMVSKIFKDDKDPNKAQSLQNDLLCGQGDVESTEPTKMMMRIAEKIDSGAASTRTWFINKQDEVVAAVHAFVSGNAAKLNLDASQTAIISMVAEFLDRFGFRCINELKLEESTLHDDPGFVIDSIAGYVKTKSYSIKDMEEREKKIKEKAEEELNSKLNVAQKVVFQWVLFHARRGVRHRENMRFARTKLWGIFRDLFRAIGNNLVRMNQLENRQDVFFLTLDEIIAYVEGRSVTNSLPGLIELRKVEFAAYNKGQAPPERFLTKGAAGPYMRYPLLIQDLDLLKQHEQDASSDPDVLKGTPCCPGIVEGVVRVAAGIEQTKGLDGEILVTSRTDPGWVPLYPLCSGLLIERGSLLSHSAVVARELGLPTIVGISGGLMKRLKTGMIVRIDAGKGEVRIIRSDEEKAKAEAAAAEDGPRKRRGSKLLEASELPAEHSKKDK* # ORIGINAL: g11098.t1 original gene structure, not modified by PASA NODE_383_length_25189_cov_44.4918 AUGUSTUS gene 8355 9155 . - . ID=g11098;Name=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS mRNA 8355 9155 . - . ID=g11098.t1;Parent=g11098;Name=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 9118 9155 . - . ID=g11098.t1.exon1;Parent=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 9118 9155 . - 0 ID=cds.g11098.t1;Parent=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 8759 8919 . - . ID=g11098.t1.exon2;Parent=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 8759 8919 . - 1 ID=cds.g11098.t1;Parent=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS exon 8355 8608 . - . ID=g11098.t1.exon3;Parent=g11098.t1 NODE_383_length_25189_cov_44.4918 AUGUSTUS CDS 8355 8608 . - 2 ID=cds.g11098.t1;Parent=g11098.t1 #PROT g11098.t1 g11098 MSKCLIYVHLLLRDHEAGCGYAPVPCPNAHECGVLLARDVAEHVKACPYTPCAHGCPEKGTPSRIEAIPPTMADIRDAVTLVTVRLRDVEIQNAAILSNIMARLEACEAEQRRVLAELKSMSLLMLKGAAAREQEARVENGAGKLQLVTV* # PASA_UPDATE: g11100.t1, single gene model update, valid-1, status:[pasa:asmbl_6633,status:3], valid-1 NODE_383_length_25189_cov_44.4918 . gene 13905 15611 . - . ID=g11100;Name=g11100.t1 NODE_383_length_25189_cov_44.4918 . mRNA 13905 15611 . - . ID=g11100.t1;Parent=g11100;Name=g11100.t1 NODE_383_length_25189_cov_44.4918 . five_prime_UTR 15519 15611 . - . ID=g11100.t1.utr5p1;Parent=g11100.t1 NODE_383_length_25189_cov_44.4918 . exon 15358 15611 . - . ID=g11100.t1.exon1;Parent=g11100.t1 NODE_383_length_25189_cov_44.4918 . CDS 15358 15518 . - 0 ID=cds.g11100.t1;Parent=g11100.t1 NODE_383_length_25189_cov_44.4918 . exon 13905 15110 . - . ID=g11100.t1.exon2;Parent=g11100.t1 NODE_383_length_25189_cov_44.4918 . CDS 13937 15110 . - 1 ID=cds.g11100.t1;Parent=g11100.t1 NODE_383_length_25189_cov_44.4918 . three_prime_UTR 13905 13936 . - . ID=g11100.t1.utr3p1;Parent=g11100.t1 #PROT g11100.t1 g11100 MKTCDVRLGPYDVRVCETDDARGRGLFAARAFAPGETIMYAKPAAIGIPHAWYRHVCVCCMSFTHRRKLPILCDTCKMVAYCSSVCKEAPVEVARHGAECAALRQLAEFISRAEKQADEDEAREGEDITGFETRLRFLVSLAASMITGVDQASAVLPPVPHADKNAAAYASVLADAPQPLLDDLLHLAGDPSLFAIECICWGRMHPVVHSCALRVRPPCSIDPAYKREAVPKYAPSAVPLSGFVGRVLDSPASLAAVVCREECNSFGFWDRDGEMYAYGLFPFASYFNHSCVPNAVKLVRGRMVMFRATAPIMAGDEICLSYVQVTDSCDARNSKLLEMYRFECGCERCRGGDGCEADVLFMRSRAHLRSPAALPPTGTDDYSSSDCLRAGHPAGATTGSLAHANAVGCGGVVYSSTTDGHVGKFCSVCGDVGESSLQNCESLK* # ORIGINAL: g8130.t1 original gene structure, not modified by PASA NODE_2210_length_7250_cov_95.4117 AUGUSTUS gene 5600 6745 . + . ID=g8130;Name=g8130.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS mRNA 5600 6745 . + . ID=g8130.t1;Parent=g8130;Name=g8130.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS exon 5600 6745 . + . ID=g8130.t1.exon1;Parent=g8130.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS CDS 5600 6745 . + 0 ID=cds.g8130.t1;Parent=g8130.t1 #PROT g8130.t1 g8130 MVFVSFLHPQQSSTIFPDIEEGNEPRSPLPQHRKTPLGKVEEKPPSFPVSNAGRTASAGHPTADEVRELAAMMVVRTGSRKIPFHKLSYAQKIAVKEGPEFQRQLEHVTTVIDAMDDAARYGFLEVLLRHCVSNEVAYLCSVLEPTFHRDFLYSATNKFPSLPAGPLPLPRLAKTQPPQGKNNNGRRVVLSVQEHQGGGGHGGRDSRNGRDSRGSRTGRDSVRAFLSQYLATSTANMSASRGISPGPSDRLSSSMGASAHNLGASMSRGADDGSSAMAMHGHTHMDLESSQGVHLMSRSMTTASPRRQRRGSTTQERLTPPLFRSNRLNLSSISDLKRQMIEASREEQKAADELPPSDDEDASPNEGDSSDGEGLHRSNYS* # ORIGINAL: g8129.t1 original gene structure, not modified by PASA NODE_2210_length_7250_cov_95.4117 AUGUSTUS gene 1494 4145 . + . ID=g8129;Name=g8129.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS mRNA 1494 4145 . + . ID=g8129.t1;Parent=g8129;Name=g8129.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS exon 1494 4145 . + . ID=g8129.t1.exon1;Parent=g8129.t1 NODE_2210_length_7250_cov_95.4117 AUGUSTUS CDS 1494 4145 . + 0 ID=cds.g8129.t1;Parent=g8129.t1 #PROT g8129.t1 g8129 MRQTASHVDGADGTSASIGAAHTGARVDGVGVDDVGAVAYSMMQFCAVVHASHIPREWLTDIGKHAGTASQLSRTASPTDSPSDAKSPTASMSPRLPVFSNHCARQAIGRLFEYGILTDAADGDTSLPSDDSGHVNCDTHVQAATLLRMDSASKALYVSKALRALVPHFCFEYHEPTTWQPSKDVSHHVTRTCDIYDDATAFAGDWESVALLRVRLGRLCSVFQGFGDAMGSFEAAQSLVVKHCPSDHISFAITLHDVGSVYRSQGRNVDALKVYEQALSIQRMHYRNNGAEGDHASVAVTLHQIANVHCSARRYDEALKLYADALEMKKRVFREDHLEVAITLHEMGNAHRLVGRHTAALSAYDESLRMKRRLRGDEHAEVAVTLHEMGNAYRVSGRQEEALSAYDESLRIKRRVYGDEHAEVAVTLHEMGNAYRVSGRQEEALSAYDESLRIKRRVYGDEHIEVAVTLHETGNVHRVCERYSEAMKLYAESLHIKRGLYDHDHLDVAVTLHEMGNIHRITQRYTEALESYSEALDIKRNLFSDSHFETAVTLHEMGNVYRLSGRHGEALTSYGEALKMKKDVFRDAHVEVAVTLHEMGNAHRLSGRHTQAMALYREALEIKRNLHGDGHKSMTVTLNEMGNLHRMAGRNAEALEVCTEALAVCRQHGAENTREAAITLQSIGIIHGKEGRLDDALATLCECVSILYACLGRIHRDCAVALCALGDVQCAMEGHDGATATYEEALAILHGCVLVDSRSVNAEAIFQLMVTVVGRIRTVENAFVLEDAGPDGDENDENGVDEGNGRQDENADNRGGGGGINVGGIRRIRWSVAGGPRSVRRLRGRGKLVHAAHLAQSVECVNEISAEGNIKTAENSDRRVTRQ* # PASA_UPDATE: g1596.t1, single gene model update, valid-1, status:[pasa:asmbl_9751,status:12], valid-1 NODE_867_length_16549_cov_39.1902 . gene 5120 7102 . + . ID=g1596;Name=g1596.t1 NODE_867_length_16549_cov_39.1902 . mRNA 5120 7102 . + . ID=g1596.t1;Parent=g1596;Name=g1596.t1 NODE_867_length_16549_cov_39.1902 . five_prime_UTR 5120 5159 . + . ID=g1596.t1.utr5p1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . exon 5120 5383 . + . ID=g1596.t1.exon1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . CDS 5160 5383 . + 0 ID=cds.g1596.t1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . exon 5542 5662 . + . ID=g1596.t1.exon2;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . CDS 5542 5662 . + 1 ID=cds.g1596.t1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . exon 5873 5974 . + . ID=g1596.t1.exon3;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . CDS 5873 5974 . + 0 ID=cds.g1596.t1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . exon 6089 6182 . + . ID=g1596.t1.exon4;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . CDS 6089 6182 . + 0 ID=cds.g1596.t1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . exon 6412 7102 . + . ID=g1596.t1.exon5;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . CDS 6412 6632 . + 2 ID=cds.g1596.t1;Parent=g1596.t1 NODE_867_length_16549_cov_39.1902 . three_prime_UTR 6633 7102 . + . ID=g1596.t1.utr3p1;Parent=g1596.t1 #PROT g1596.t1 g1596 MMALNRPWLRPGIVRLSLLLCLVLTCCAGADAIAAHAAERTEARGPVVAATARDASTADAASDAAEDVVVKGDITLLPGLSVDNMSLRPGDSMYFRIGGLEQGAQYEVRISYSATTPADFLMRLHAHVGRSLTNIEKVIFNTREPGSAQAFMEGYLEVTAFYAGYTDIAAVAARAIPFNIVVERLYYGAPLEAFKLGAIAACLVCAAVVVSARVDVFLRFVLSANGTPVAISHYRKSPPVSPRSPVNSGRRVL* # ORIGINAL: g1598.t1 original gene structure, not modified by PASA NODE_867_length_16549_cov_39.1902 AUGUSTUS gene 12742 14605 . + . ID=g1598;Name=g1598.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS mRNA 12742 14605 . + . ID=g1598.t1;Parent=g1598;Name=g1598.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 12742 13447 . + . ID=g1598.t1.exon1;Parent=g1598.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 12742 13447 . + 0 ID=cds.g1598.t1;Parent=g1598.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 13806 14605 . + . ID=g1598.t1.exon2;Parent=g1598.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 13806 14605 . + 2 ID=cds.g1598.t1;Parent=g1598.t1 #PROT g1598.t1 g1598 MAQEGNPIWGRFLRPQSVVLRALAAMVFIAIVAHFSYSSHRTRNNVVLLPDCIRVQGEGAANGPAIGVSGEHFSPEAMEWDDERESYPPKDARVPFHPVVVGERWIVVTSINYPTPTVRKLASLEGWNVVVVGDNKSPRDWNISSPSCVFLDVETQKRLPFRTNRLSPFNHYGRKNVGYLFAIASGARVIYETDDDNILIGDTIRFLEDDFLQMPVYNVPRRSVVNPYPNFGLRRAWPRGYPLGSIALQPNTEFVDETVRPLVQQGLANGDPDMDAIYRLTRAGRGPGNSKAIIHMEFDDDHPAIALPHYTLTPFNSQNTFFAYDALWALLIPVSTNFRVCDIWRGYWIQRLLWDIGGSLAFLPPGVLQRRNIHDYMRDYVDELPLYADAQRLADFLFDWQPSSPRATLFERMIEMGQDMAVAGFWKPLDARLMAAWALDLQDLGYKEPSVVAGPTGGSNRNGPRVLVPRVLKEVDVADWDGRTSKELDDWMGSLNRGMSY* # ORIGINAL: g1595.t1 original gene structure, not modified by PASA NODE_867_length_16549_cov_39.1902 AUGUSTUS gene 2686 4422 . - . ID=g1595;Name=g1595.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS mRNA 2686 4422 . - . ID=g1595.t1;Parent=g1595;Name=g1595.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 2686 4422 . - . ID=g1595.t1.exon1;Parent=g1595.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 2686 4422 . - 0 ID=cds.g1595.t1;Parent=g1595.t1 #PROT g1595.t1 g1595 MGGEIRMRTLRLFVLACLFALVGFGLIMTTNDSSGMPTAPALSLSLHTHSKLENETGTDGRSADSPRRSATEAERLAGDTAPLAPRDPQSRGPAEVRSLTNATDARSTGLFRMGDNTRMRPLVRFVTCEVELFREAHRVLWSWMRPRFCDTCQTFDIYLHANPYSCGKRSNLPTNYFRQSLLGGSGASKIIKDMPIMERALTGPSYVNSVAWVRKVFSSKIAFCSMSARLGIGAGCYACPCKTLSYEKHLKGRRWLWKPEGGSSGHGIALITNAAALAAVSNELGSVLEFLEDPLVIVNPDTGLHNKVDVRMYGFTSGARDAPHTWVHTGAIYYRTSLNFMEYNRNDPNIAAHITNSGPAFQKKQFIAPSAHDYASSFSTWGTLRKLVAILGPEREYIVANLTQEACRLHARGFSSIVRQTTDGPSREDVVNFSGFFTDMYVSSKGKVLLLDPHIGVPFKPMRPESPSHRQALDYDPDLYQQAFRSSWGSILAPLSRFAADGRLWAEADVLASECVANVASCSSVPQPHLTRLISDGAVAIYFGYQWCGDPDRYFDCVRECDVLAMWDHLSDRIRWLM* # ORIGINAL: g1597.t1 original gene structure, not modified by PASA NODE_867_length_16549_cov_39.1902 AUGUSTUS gene 7842 11339 . - . ID=g1597;Name=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS mRNA 7842 11339 . - . ID=g1597.t1;Parent=g1597;Name=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 11256 11339 . - . ID=g1597.t1.exon1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 11256 11339 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 10722 11102 . - . ID=g1597.t1.exon2;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 10722 11102 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 10370 10527 . - . ID=g1597.t1.exon3;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 10370 10527 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 9998 10115 . - . ID=g1597.t1.exon4;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 9998 10115 . - 1 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 9712 9864 . - . ID=g1597.t1.exon5;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 9712 9864 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 9330 9428 . - . ID=g1597.t1.exon6;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 9330 9428 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 8900 8992 . - . ID=g1597.t1.exon7;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 8900 8992 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 8575 8689 . - . ID=g1597.t1.exon8;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 8575 8689 . - 0 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 8284 8382 . - . ID=g1597.t1.exon9;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 8284 8382 . - 2 ID=cds.g1597.t1;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 7842 7996 . - . ID=g1597.t1.exon10;Parent=g1597.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 7842 7996 . - 2 ID=cds.g1597.t1;Parent=g1597.t1 #PROT g1597.t1 g1597 MDDYAADAESAPLLGGEPASLPTTRNEQMTQSNYHARSLRRSNTVDPESGLVHETSTSRRSSQSGSLPGQKTNKRKKKTGDGRAEAPDHVRHHGNSGLNALSQWATGGSRGAANAHAQRSSAQMQMQQQQQQATRKEKVGAYNKFVALPSSPTAQSAFTFPTPGQDGHWARDLGRDASAEYGLLGHSPSVTGLHEGLRGRITVCCTAAAYNTKQLRKHLQDKYRGKIDMETYPIWYQEAIYAPHWDSGAPSRERAPADVFYFEYGVTVCWGLSKAQESDVFADVAPFEINKLAPQDVEIDTFEFLHSSNERPQILNDVIRINNVQDHQCKLAISHALAQSIKLVVFEQSIEYTIDSMRSIPEDLARTGKVHMSRLDISKHIGQLFLQRAAVNLLSDVLDIPEFFWSVPDYLVDLYKAARQYLEINARVDVLNARLEVLQGMLEILKDQQNQLHGEKLEWIVIWLIFFELLIGIAGIAVDAFLNS* # ORIGINAL: g1599.t1 original gene structure, not modified by PASA NODE_867_length_16549_cov_39.1902 AUGUSTUS gene 15914 16357 . - . ID=g1599;Name=g1599.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS mRNA 15914 16357 . - . ID=g1599.t1;Parent=g1599;Name=g1599.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 16355 16357 . - . ID=g1599.t1.exon1;Parent=g1599.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 16355 16357 . - 0 ID=cds.g1599.t1;Parent=g1599.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS exon 15914 16204 . - . ID=g1599.t1.exon2;Parent=g1599.t1 NODE_867_length_16549_cov_39.1902 AUGUSTUS CDS 15914 16204 . - 0 ID=cds.g1599.t1;Parent=g1599.t1 #PROT g1599.t1 g1599 MVEWFIPFALTGQVTNLPKSSLTFSPKPAVPYRLPVLLPNVLGTLDASTPSGMLGGVSYSLCLTVGSLRVSHLAVDGAVYPGEARLQAGSCVFWSSS* # PASA_UPDATE: g1594.t1, single gene model update, valid-1, status:[pasa:asmbl_9750,status:3], valid-1 NODE_867_length_16549_cov_39.1902 . gene 197 2352 . + . ID=g1594;Name=g1594.t1 NODE_867_length_16549_cov_39.1902 . mRNA 197 2352 . + . ID=g1594.t1;Parent=g1594;Name=g1594.t1 NODE_867_length_16549_cov_39.1902 . five_prime_UTR 197 420 . + . ID=g1594.t1.utr5p1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . exon 197 645 . + . ID=g1594.t1.exon1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . CDS 421 645 . + 0 ID=cds.g1594.t1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . exon 867 959 . + . ID=g1594.t1.exon2;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . CDS 867 959 . + 0 ID=cds.g1594.t1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . exon 1146 1237 . + . ID=g1594.t1.exon3;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . CDS 1146 1237 . + 0 ID=cds.g1594.t1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . exon 1512 2352 . + . ID=g1594.t1.exon4;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . CDS 1512 1995 . + 1 ID=cds.g1594.t1;Parent=g1594.t1 NODE_867_length_16549_cov_39.1902 . three_prime_UTR 1996 2352 . + . ID=g1594.t1.utr3p1;Parent=g1594.t1 #PROT g1594.t1 g1594 MDDWLALIKGALDKLEAAGKLHVHSLGAVPAAVTSGTGGAAMEGWLMKCGGRIKTWKRRFFTLSGKNLLYYKTSEPSSELLGDIDLRACIGITESESENSFVVATKDRDYQMIADSRNDMDRWLAAIRAAMEDGSIRMSTEGSDDIDDLVKRGQKTLESDSDEGEATQRTTPISIMHHRLNVAPPMDFADTPNAQPPPPLQLAIMENDGIDPATGQKRTAVDEMQLLLTNMEGMLGAGSKPSLGSTVAQPPGGSGASGAAGLAVPPAKATFDRGEGKDRSVSSTSAFDEMEALLKEI* # ORIGINAL: g10657.t1 original gene structure, not modified by PASA NODE_223_length_30767_cov_41.6448 AUGUSTUS gene 28150 29601 . - . ID=g10657;Name=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS mRNA 28150 29601 . - . ID=g10657.t1;Parent=g10657;Name=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 29135 29601 . - . ID=g10657.t1.exon1;Parent=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 29135 29601 . - 0 ID=cds.g10657.t1;Parent=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 28448 29012 . - . ID=g10657.t1.exon2;Parent=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 28448 29012 . - 1 ID=cds.g10657.t1;Parent=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 28150 28215 . - . ID=g10657.t1.exon3;Parent=g10657.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 28150 28215 . - 0 ID=cds.g10657.t1;Parent=g10657.t1 #PROT g10657.t1 g10657 MSTLDTDTRAIRATHSQPPEEDAERDVLYALVEDANGAKDCPAWLAPAAAHGLTVEVVSAADARPRGGFDGRSLFETLCAASKGTADCISTSDSPGGFYRAGAGAASAPCGCAVLWGRMLPSTQRILADALPLAPLGAVCVATQQSKGAGRAGNAWVSPLGCLCASFTVAVRDPQHLITIQYVAALAVVRGAADCATPAEWNARPLRLKWPNDVYAGPDKVAGILCNSRYDPARALFVSTVGVGLNTSNALPTTCLDALYPSTAPHARELVLSRIMAQFGHFMEMLEREGFGASLRSAYTAHWMHGGQRLTLAPDGTAVTVVGLSPEGQLLGTTDSGETVELHPDGNSLDIFKGLIKKKIAPPPQ* # PASA_UPDATE: g10650.t1, single gene model update, valid-1, status:[pasa:asmbl_3855,status:12], valid-1 NODE_223_length_30767_cov_41.6448 . gene 3354 4842 . + . ID=g10650;Name=g10650.t1 NODE_223_length_30767_cov_41.6448 . mRNA 3354 4842 . + . ID=g10650.t1;Parent=g10650;Name=g10650.t1 NODE_223_length_30767_cov_41.6448 . five_prime_UTR 3354 3430 . + . ID=g10650.t1.utr5p1;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . exon 3354 3473 . + . ID=g10650.t1.exon1;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . CDS 3431 3473 . + 0 ID=cds.g10650.t1;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . exon 3873 4043 . + . ID=g10650.t1.exon2;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . CDS 3873 4043 . + 2 ID=cds.g10650.t1;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . exon 4166 4842 . + . ID=g10650.t1.exon3;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . CDS 4166 4296 . + 2 ID=cds.g10650.t1;Parent=g10650.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 4297 4842 . + . ID=g10650.t1.utr3p1;Parent=g10650.t1 #PROT g10650.t1 g10650 MTNLILTGTTASFQEMWVNIYMWTVLSTTLVHLLAGMVAFFSFRKIPFAWAIPIAYVAFGVLIASSAGAITGLIIAAIYTSGGFDMPAEQIYIAGFGQTAIICLVAFTRFYVLL* # PASA_UPDATE: g10652.t1, single gene model update, valid-1, status:[pasa:asmbl_3852,status:3], valid-1 NODE_223_length_30767_cov_41.6448 . gene 12164 15806 . - . ID=g10652;Name=g10652.t1 NODE_223_length_30767_cov_41.6448 . mRNA 12164 15806 . - . ID=g10652.t1;Parent=g10652;Name=g10652.t1 NODE_223_length_30767_cov_41.6448 . five_prime_UTR 15615 15806 . - . ID=g10652.t1.utr5p1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 15612 15806 . - . ID=g10652.t1.exon1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 15612 15614 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 15451 15490 . - . ID=g10652.t1.exon2;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 15451 15490 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 15093 15316 . - . ID=g10652.t1.exon3;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 15093 15316 . - 2 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 14728 14907 . - . ID=g10652.t1.exon4;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 14728 14907 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 14306 14565 . - . ID=g10652.t1.exon5;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 14306 14565 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 13956 14135 . - . ID=g10652.t1.exon6;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 13956 14135 . - 1 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 13638 13803 . - . ID=g10652.t1.exon7;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 13638 13803 . - 1 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 13376 13523 . - . ID=g10652.t1.exon8;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 13376 13523 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 13066 13177 . - . ID=g10652.t1.exon9;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 13066 13177 . - 2 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 12628 12835 . - . ID=g10652.t1.exon10;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 12628 12835 . - 1 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . exon 12164 12402 . - . ID=g10652.t1.exon11;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . CDS 12313 12402 . - 0 ID=cds.g10652.t1;Parent=g10652.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 12164 12312 . - . ID=g10652.t1.utr3p1;Parent=g10652.t1 #PROT g10652.t1 g10652 MVLLAAAVCTKAGKAIVSRQFVEMTRSRVEGLLAAFPKLMGSGQQHTFVETDAVRYVYQPLEQLFVVLITTKNSNILEDLETLRTFGKVIPEYCRVLDEKEVFEHAFELIFAFDEIIALGYRESVNLAQIRTYTEMDSHDENIYLMVQKNKEREAKEEMKRKMKELERDRREMARSGRGSQSATGFGSNSVGQYGGMPIASTGSSGGFSATGGYSASDAAAARMDDTKSSYGTSQKSAAPSKGMKLGGGRAKTNDFVDALVAEGEVVHTEQQQGQRPVGSSGAKATIVAPPVNTESIHIRVDEHILLVANRDGGLQNMEVKGDMFLRISDASVARCRLRLKMAEDKGFQYKTHPNVDKKLFSESALIGLKDASRPFPVNNELGVLKWRLQTQDESMIPLSINCWPSQNADGSCDVNIEYELEEDGLELRDVLISIPMPPGSGNPVVGDIEGSYRYDARASRLDWQLPIIDKSNKSGSLEFGVAAGDPKHFFPVHVNFMATRSYCGIEVLGVGNVDTNADMKYSQEVFFGVEQYEIV* # PASA_UPDATE: g10655.t1, single gene model update, valid-1, status:[pasa:asmbl_3853,status:3], valid-1 NODE_223_length_30767_cov_41.6448 . gene 20750 23866 . - . ID=g10655;Name=g10655.t1 NODE_223_length_30767_cov_41.6448 . mRNA 20750 23866 . - . ID=g10655.t1;Parent=g10655;Name=g10655.t1 NODE_223_length_30767_cov_41.6448 . five_prime_UTR 23628 23866 . - . ID=g10655.t1.utr5p1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 23510 23866 . - . ID=g10655.t1.exon1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 23510 23627 . - 0 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 22949 23133 . - . ID=g10655.t1.exon2;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 22949 23133 . - 2 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 22603 22760 . - . ID=g10655.t1.exon3;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 22603 22760 . - 0 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 22337 22465 . - . ID=g10655.t1.exon4;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 22337 22465 . - 1 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 21868 22151 . - . ID=g10655.t1.exon5;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 21868 22151 . - 1 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . exon 20750 21665 . - . ID=g10655.t1.exon6;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . CDS 21475 21665 . - 2 ID=cds.g10655.t1;Parent=g10655.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 20750 21474 . - . ID=g10655.t1.utr3p1;Parent=g10655.t1 #PROT g10655.t1 g10655 MGCSQSTEDKAALDRNKAIEEKLKDDERKMSTEVKLLLLGAGESGKSTIVKQMKIIHEKGYTQDECIEFKNIVYSNTIQSMQTLVTAMETLEIPYGSDDRKPDAQKVLSYGDDLDGITLNDELASAIKRLWADSGIQKCFSRASEFQLNDSAKYYFDSLDRISASDYVPGEQDVLRTRVKTTGIVETHFEFKGLFFRMFDVGGQRSERKKWIHCFENVTAIIFCAALSGYDQMLAEDETTNRMHESVKLFDSICNSKWFLKTSIILFLNKTDLFTEKIPKVPLTICFPEYTGPTADVEAAKDFIKKKFEEMNRSNQKQIYTHFTCATDTNNIKFVFAAITDIIIQNNLRDCGLI* # ORIGINAL: g10651.t1 original gene structure, not modified by PASA NODE_223_length_30767_cov_41.6448 AUGUSTUS gene 5038 11818 . - . ID=g10651;Name=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS mRNA 5038 11818 . - . ID=g10651.t1;Parent=g10651;Name=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 7388 11818 . - . ID=g10651.t1.exon1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 7388 11818 . - 0 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 7047 7253 . - . ID=g10651.t1.exon2;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 7047 7253 . - 0 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 6802 6908 . - . ID=g10651.t1.exon3;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 6802 6908 . - 0 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 6209 6649 . - . ID=g10651.t1.exon4;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 6209 6649 . - 1 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 6003 6086 . - . ID=g10651.t1.exon5;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 6003 6086 . - 1 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 5666 5830 . - . ID=g10651.t1.exon6;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 5666 5830 . - 1 ID=cds.g10651.t1;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 5038 5485 . - . ID=g10651.t1.exon7;Parent=g10651.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 5038 5485 . - 1 ID=cds.g10651.t1;Parent=g10651.t1 #PROT g10651.t1 g10651 MSAADALLSSLAAGKIDAGLVRAVQTYATEAASAPRKKKGYKSDGVAFATVAKLAGAVTRALATPHLDDAVVSSLAAAGNAVIEAVDALRPAGPSLDPEKMTYNFMLKTVERKLFQTALQTAGLLESMLDARSDVSTTQEFHTIAIGAVLNKGACMETAGDATSIAEYVGVTAPRGLLLVRNLASLDQAAGVRQADALYRVLYRLAARAELLPTCGGSVALEARRIALVALADAKYEPKEFADLASKCATRYASLCPPKQKGCVDAALAEFAASTIAIAHGRLVGAQGAPPPGSLSALGRLSESVGGILVHFGMLREAAAAYAPWEQCARKVACEHAAAVSAIAGMALSDGGTARPASQIAVHMSAVATAVASVCSAKPLNPAHIRRAFDGTEPLRRALAKVCASGAVDHGSVVGEDAIAACEKAMGAIAGVSRLAAELAVGTGSSDPLRSEDAGRFLTGAVQSHVLACQITCAVPERKGASGASHLSAASTLLAQWTRGCPPDLWKTLGSAACNLGSDQYSRGLHTEAFDALSVGVYAFEQCAALYRSTAGEAEAVSALQLPRRLSLLASCLLKLQRTAEAKDAIARALRYLLPSEVATPSPLTIALVDQSVRVDSAGETVCLKDTWALVLQGDSMDGALLRLIDVELRALNAHGLDGTPRHRSAIDAVLSLTAAVASHDAKLTDPSGKGGPKRGAKQPQSRSRTQDVAPSTACDPDCGLLVARSSAMVESALVLRKEGSLDEAVAVCDAALALAQRAGCGSEAAACANATAAMYRAMLASDCGHSPLSHLRAALDVFRCLMDTRQTATATDTASAASSQRPSGAAAAMMALADYLDSANMDAACAECLALVRNVSASAEANALQLREAWARLRAGQGDRAIELASALMKLTVTGSPAHVEAAVVCAAASMTTPTDSRKAGPALPRPPAVAAGASRSQLREVSRLMHTTSYALHRGCCRCDANGLALAKEAVAVRKALARIDSGAMVKGQPTAASVGTSQWADLADFCRSLALVGRAYEVRGLPRDAAYYFAHGYAIGDATKRPLVAAEFALLLAGVESRRGREADCLKHVEAARQLLTPLCDASDEWPLVGESAVARQRRALAMRECDFLTAFATGSDRLRVVALLKDDASRATPDFAALHRLSRAHSLLGNAPEFRDCSERALLAARTPHERARGLVQLARACHVLPVPSFAPPAHEAAQGIAAAVEVVPGKAPSRGGGRAAPAVAAQQKKGVRATVKSAPASAPVFTSTPLPALSNIESLLNEALGISRLHSLRVVQRQACAALASVFAHDRNAPSAAERVIEGIGCALRGQLADERYSTTAVGADSATADADALASMLSSLSLDANGLPADLAVLLRALDVADELTVVCLSVSDGGGVLVTRLVSPSTGSAIAAVAQSPFGSSVDGSASALRKCVADFLLILDDSQKSMASVSSGAMDGDAKGRWWRERVNLDARVKTLVHDMEESVLGWTKVLLAGKRESASLFVEHAVASVRDAFPAMDGSTAEVIRCVIDSIDALSDEHVAAFIRDFLGVSDTAQAKEVSDLIRKVRASSAIAVPVAPAAAAEAKKAKGGRRGRAAEDADCAPAQPVAAAPAAGELPPPGCGIRRHATVLVLDGSLQCLPWESMPCIRNCAVTRVPSVDFIVRAIALQQQQQQRQQKQQQHEQPPSGKKGKPPNTDANKLAHAHAAAAWPVVRANAPAAYVLNPGGDLKATQDTFEPPFSSTKGWTGIVARRPSEDEMKAMLTANDIFVYCGHGAGDEYVSPDALMRIACRAAAFLVGCSSGRLREAGEYEPTGTPIAYLAAGSPAILANLWDVTDRDIDRFSARVFTDWLGVSCDSATASGVAGGEHVMRKDGAHSQPLSLSRGHHLAASAPDAHPNIPAASAAVRGRACADKITSAASTAAAAALACGSHVTDGDACLARCVAGARDACRLPYLIGAAPVVYGVPVRIRR* # ORIGINAL: g10649.t1 original gene structure, not modified by PASA NODE_223_length_30767_cov_41.6448 AUGUSTUS gene 76 3107 . - . ID=g10649;Name=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS mRNA 76 3107 . - . ID=g10649.t1;Parent=g10649;Name=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 1985 3107 . - . ID=g10649.t1.exon1;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 1985 3107 . - 0 ID=cds.g10649.t1;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 1554 1717 . - . ID=g10649.t1.exon2;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 1554 1717 . - 2 ID=cds.g10649.t1;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 1241 1455 . - . ID=g10649.t1.exon3;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 1241 1455 . - 0 ID=cds.g10649.t1;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 616 1008 . - . ID=g10649.t1.exon4;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 616 1008 . - 1 ID=cds.g10649.t1;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 76 388 . - . ID=g10649.t1.exon5;Parent=g10649.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 76 388 . - 1 ID=cds.g10649.t1;Parent=g10649.t1 #PROT g10649.t1 g10649 MAQLKAALPLEQRRTRITNPATGTEIEVPTLDARTSDPIEMLSYVPPGTAGVAHASGDDRSEYLAVLNADASHILRLPYGRFWSTAIFNASVGRFLDSYLRYAPRGAAAADAASTWPGEADLRRRVVLLFLRIARSGESQDDYMEPATHADIIYENWLFDVPKLLDLCVLAGPAGAAHSLVAQTVRSVFEAQPKYAEDLDGSAAVIVDDVIARLAEKASSSSTAGKGPVLLARGKGASGGAATPAASLAQVEAADALAYVGELSRTLLLFVRAYPPAAECLQRHNLIGALARLYDDTLPKLREVAFPGSGDGASGAGTAPPLPVARARAAILALCDALIECAYVDVIMTAVSAGGASGAGAVAEALLECVGGILTRMEYILSALKVPQVAQKQSEKVVTTATNAARGKTAAKKGADGRGAGHGAASGGKTSSTKADGGSGGSDALAAAAQHVVELLPDIGAGFALACVEAFGGDAERAINAILEDSLAGPLRELPRNITKDAYLERRKGGAAADGSARNSGKGKQPASPLPAAAANDSARQPITQQHQQRPPKQPQRPQQQQQQQVRRDAKGNQSESAAHVRSTNASEAPQSQPQPQRPNYQTRRNIFDNDEFDVFSRDNIDSSKIHRGKKSAGDVLHLLDDKSLVEAFRDDYLYDDEYDDTYDDAVPDPVREFEALEEQVAALPFNPNRRTDALAEFERKRKEAEIALIKHAEKNGLPPPPSFASAGGDGKHDDR # ORIGINAL: g10654.t1 original gene structure, not modified by PASA NODE_223_length_30767_cov_41.6448 AUGUSTUS gene 18921 20624 . + . ID=g10654;Name=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS mRNA 18921 20624 . + . ID=g10654.t1;Parent=g10654;Name=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 18921 18998 . + . ID=g10654.t1.exon1;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 18921 18998 . + 0 ID=cds.g10654.t1;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 19102 19178 . + . ID=g10654.t1.exon2;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 19102 19178 . + 0 ID=cds.g10654.t1;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 19664 19784 . + . ID=g10654.t1.exon3;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 19664 19784 . + 1 ID=cds.g10654.t1;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 20001 20087 . + . ID=g10654.t1.exon4;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 20001 20087 . + 0 ID=cds.g10654.t1;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS exon 20301 20624 . + . ID=g10654.t1.exon5;Parent=g10654.t1 NODE_223_length_30767_cov_41.6448 AUGUSTUS CDS 20301 20624 . + 0 ID=cds.g10654.t1;Parent=g10654.t1 #PROT g10654.t1 g10654 MFVKTKAMLNSNHEYALLSVVDAAVWVQGFTKEVAALTQCLSVLTTLGEATTAELVREPIASAAPGAFPFVVRVVFLYSRSGMIPHLDTSDPIVAELLASPLFFIDAVYFHDKPSVDNNPQAVYDAITTMDPTARRSYFYEISTSIRRLYVSCASLVGHPLQRPFQEMARYTLTPPGPPPAPAPAPAPASSAPVGLTASTNGRTLQTDSRGPSSPKPEKEAQGFFSLF* # PASA_UPDATE: g10653.t1, single gene model update, valid-1, status:[pasa:asmbl_3856,status:12],[pasa:asmbl_3860,status:12], valid-1 NODE_223_length_30767_cov_41.6448 . gene 15914 18066 . + . ID=g10653;Name=g10653.t1 NODE_223_length_30767_cov_41.6448 . mRNA 15914 18066 . + . ID=g10653.t1;Parent=g10653;Name=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 15914 15990 . + . ID=g10653.t1.exon1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 15914 15990 . + 0 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 16297 16323 . + . ID=g10653.t1.exon2;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 16297 16323 . + 1 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 16620 16654 . + . ID=g10653.t1.exon3;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 16620 16654 . + 1 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 16771 16845 . + . ID=g10653.t1.exon4;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 16771 16845 . + 2 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 16996 17082 . + . ID=g10653.t1.exon5;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 16996 17082 . + 2 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . exon 17331 18066 . + . ID=g10653.t1.exon6;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . CDS 17331 17527 . + 2 ID=cds.g10653.t1;Parent=g10653.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 17528 18066 . + . ID=g10653.t1.utr3p1;Parent=g10653.t1 #PROT g10653.t1 g10653 MLGAGELKIGRFGWAMLEHFQFKWGGRIPCSEGVSGKMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKILASKYNCDKMVCRKCYARLHPRAVNCRKKKCGHTSNLRPKKKLK* # PASA_UPDATE: g10656.t1, single gene model update, valid-1, status:[pasa:asmbl_3858,status:3], valid-1 NODE_223_length_30767_cov_41.6448 . gene 25032 28293 . + . ID=g10656;Name=g10656.t1 NODE_223_length_30767_cov_41.6448 . mRNA 25032 28293 . + . ID=g10656.t1;Parent=g10656;Name=g10656.t1 NODE_223_length_30767_cov_41.6448 . five_prime_UTR 25032 25089 . + . ID=g10656.t1.utr5p1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . exon 25032 25919 . + . ID=g10656.t1.exon1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . CDS 25090 25919 . + 0 ID=cds.g10656.t1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . exon 26097 26717 . + . ID=g10656.t1.exon2;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . CDS 26097 26717 . + 1 ID=cds.g10656.t1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . exon 26918 27536 . + . ID=g10656.t1.exon3;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . CDS 26918 27536 . + 1 ID=cds.g10656.t1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . exon 27743 28293 . + . ID=g10656.t1.exon4;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . CDS 27743 27970 . + 0 ID=cds.g10656.t1;Parent=g10656.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 27971 28293 . + . ID=g10656.t1.utr3p1;Parent=g10656.t1 #PROT g10656.t1 g10656 MADQSSAPTSATAAQAPATATTAPFSDGSRRHVLKSPLLERLTTVTIDDPFDLYGGDVDIGAVEDAADADASEGKIPDVHIRGPLVSESFTGYGRSNAHFPVNEENELKRDEVTWRKEVYKALVGDETDYRRVAVGELAVPQEISEETRQITALLVQAMGVRRRYMTASLQDFPESASAAVDCATRPDFELLARRKSCVRDPHEPVAHDRHRPLFRPFDVEIPGHSGHVMEMVDGVMHVYADEKGRAQKERLYDFPSLRTYYRDLKFLLELTIDGPSKSFAFRRLRFLEAKFNLHVLLNEMEELTAQKAVPHRDFYNVRKVDTHVHHSSCMNQKHLLRFIKKTLKTNGDEVVIFRDGKYLTLQQVFDSLKLTAYDLSVDTLDMHADRNTFHRFDKFNLKYNPVGESRLREIFLKTDNHIKGRYLARLTKEVFDDLEESKYQHAEPRISIYGRKRNEWDCLADWMVENEMYSENIRWLVQVPRLYSVFREANHVQSFQDVIDNIFMPLFEVTLDPSSHPNLHRALQQIVGFDSVDDESKPEVRIHLKYPSPSDWTEDKNPPYSYYIYYMYANICVLNQMRQARGLNTFKLRPHSGEAGPVDHLAAAFLTSQSISHGILLRKVPVLQYLYYLTQVGIAMSPLSNHSLFLSFQRNPMPEYFARGLNVSLSTDDPLMFHVTKEPLIEEYSIASQVWKLSACDMCELAVSSVRQSGFEEDVKKRWLGSKHAKEGPEGNDIRRTNVPNIRVAYRHDTLIDELAVVSGLKVM* # PASA_UPDATE: g10658.t1, single gene model update, valid-1, status:[pasa:asmbl_3854,status:12], valid-1 NODE_223_length_30767_cov_41.6448 . gene 29890 30678 . - . ID=g10658;Name=g10658.t1 NODE_223_length_30767_cov_41.6448 . mRNA 29890 30678 . - . ID=g10658.t1;Parent=g10658;Name=g10658.t1 NODE_223_length_30767_cov_41.6448 . five_prime_UTR 30671 30678 . - . ID=g10658.t1.utr5p1;Parent=g10658.t1 NODE_223_length_30767_cov_41.6448 . exon 30433 30678 . - . ID=g10658.t1.exon1;Parent=g10658.t1 NODE_223_length_30767_cov_41.6448 . CDS 30433 30670 . - 0 ID=cds.g10658.t1;Parent=g10658.t1 NODE_223_length_30767_cov_41.6448 . exon 29890 30284 . - . ID=g10658.t1.exon2;Parent=g10658.t1 NODE_223_length_30767_cov_41.6448 . CDS 30115 30284 . - 2 ID=cds.g10658.t1;Parent=g10658.t1 NODE_223_length_30767_cov_41.6448 . three_prime_UTR 29890 30114 . - . ID=g10658.t1.utr3p1;Parent=g10658.t1 #PROT g10658.t1 g10658 MYVCMCVCWLRVEPAPSSFHLAQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTLTSKMNLADEVDLEDFVSRPDKISGAEIAAICQEAGMQAVRKNRYVVLAKDFEKGYKNNVRKTETEHEFYK* # ORIGINAL: g4491.t1 original gene structure, not modified by PASA NODE_1166_length_13430_cov_41.5587 AUGUSTUS gene 201 8076 . - . ID=g4491;Name=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS mRNA 201 8076 . - . ID=g4491.t1;Parent=g4491;Name=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 8061 8076 . - . ID=g4491.t1.exon1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 8061 8076 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 7393 7626 . - . ID=g4491.t1.exon2;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 7393 7626 . - 2 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 7000 7135 . - . ID=g4491.t1.exon3;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 7000 7135 . - 2 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 6191 6725 . - . ID=g4491.t1.exon4;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 6191 6725 . - 1 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 5793 5939 . - . ID=g4491.t1.exon5;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 5793 5939 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 5471 5555 . - . ID=g4491.t1.exon6;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 5471 5555 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 3796 5135 . - . ID=g4491.t1.exon7;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 3796 5135 . - 2 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 2722 3370 . - . ID=g4491.t1.exon8;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 2722 3370 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 2023 2426 . - . ID=g4491.t1.exon9;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 2023 2426 . - 2 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 1500 1656 . - . ID=g4491.t1.exon10;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 1500 1656 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 997 1229 . - . ID=g4491.t1.exon11;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 997 1229 . - 2 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 563 823 . - . ID=g4491.t1.exon12;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 563 823 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 201 324 . - . ID=g4491.t1.exon13;Parent=g4491.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 201 324 . - 0 ID=cds.g4491.t1;Parent=g4491.t1 #PROT g4491.t1 g4491 MSFAGEGDTASPYGMSHDGRAESVDGNVDLDVDIQHVEEDGMNFEIKGRLDLENRSATQDEIESNEESSAEEAEESAVDQAECGKHPDGRERDIIDTIPGDAAAHYTIRRRQSSFFQGKRGKATNVDERIQETEDDPHYEPLSHFSGIARASFLSRVTFHWVTPLIARGYRHVLHMRDVWALSPSDATEPNTARFEEEWEREVRMATEQVLARNADSGARATPDAVRKAAVLEASIPRAFFRTFKREIIFAEIVLTLFAGVACLGPMFFLRRIIEHVQIEGSSLGAGLGLAFGLMFSETLRSVLISQHWFAAVRIGTRARSIMTALAYKKAVRLRTLGSKTVGEIVNLVTNDSQRVWDAIGFGSFVYLSVLMTVLAVCYTVALIGPYAAVGCATFTLFYPFQMMCARMSGKYRRLSIAITDRRVRMMGELLSCIRLVKTYAWEAPFAEKIGSIRAEEKAILQKAAYLQSLNVSVTPLAPTIAAVLTFSLHALAGESLSSAEAFTVISVFNLLRFPVSILPLATKNITEAIVGVGRLKDLLSMDESRGLLPDPADPTMAIVIPKSDFQWEVVLQLKKTDKKKKTTSRYASRERRVTKTGTKDAAVAGKGVDASPHVTGTAEPQKAKGWSFGRKGKRQAKTVCGEVGEHSRTGHIVIELSGDDATVDVTAPTMEDVTSDSSAAPACPVDDMSKRQGPPPSHTADKIEPFRLVGIDVSVGVGRLVGVCGAVGSGKSSLLSSILGEMRREEGDFGQESMAPLCIRGRVAYASQQAWIMNATVRENILFGRAYDKAQYDRAIEACCLVHDLTILPQGDMTEIGERGITLSGGQKQRVSLARAVYADADVYLLDDPLSAVDAHVGHHLFDRCIGGVDSALATKTRVLVTHQLQYLDRCDEVWFMSGGRIAERGTFEELMRIRSPPKPPTTMNTTTTTTTIPTTTNTSASDACEGTTVNAVAVTADTEDLRSESSTGGEFAALIDMFYAKNTDNAGDDKEGPVADELASTQVAGSLRDATLAKKGNAVRAGGPVMGTTAGVDEEKGAAAPASTDEENRKPQQTVALMSKEDREEGAVGMHTYRTYMSNGGGVFLYMFLISFFVLCMTTKTFSDYWLAYWLRQGCGTGCPTVAEPVYGNVTNGTSGNSTTYYGVVTINYVVTSHSIADNPDLHMYIIVYCLAAVGLIAMQTVRGAFFFRATLASSSSLHNSVFKKVLRAPMAWFDVTPTGRLTNRFSKDLDEVDVKLPFFGEQLLQNMALILLAIVLIALVFPFFLVALVPMVIIFLVLNSYFRRSVRELARLDGITRSPVISLLTASVQGLSTMHAYGATDDFIRRFVGLVDVNTRAFFALYCANRWLAYRLDILTTGITTITALFVVVSHELGSVSPALSGLALSYAMQLGGMFQYTVRLLADVESRFTSVERIAHYIENTPEEAAEEVPGALPAP # ORIGINAL: g4492.t1 original gene structure, not modified by PASA NODE_1166_length_13430_cov_41.5587 AUGUSTUS gene 10486 13193 . + . ID=g4492;Name=g4492.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS mRNA 10486 13193 . + . ID=g4492.t1;Parent=g4492;Name=g4492.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 10486 12582 . + . ID=g4492.t1.exon1;Parent=g4492.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 10486 12582 . + 0 ID=cds.g4492.t1;Parent=g4492.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS exon 12915 13193 . + . ID=g4492.t1.exon2;Parent=g4492.t1 NODE_1166_length_13430_cov_41.5587 AUGUSTUS CDS 12915 13193 . + 0 ID=cds.g4492.t1;Parent=g4492.t1 #PROT g4492.t1 g4492 MGPTHVLDDPWAVAWLHSTGSIAEAAGGVAFVYCACAQQVAASSPFWATSKESEMPFNAHAMRQHYVADGVPTDKVADLIIAGEEDAVRFEDWLCRLARGDASTLSVCIEARSTAMHGHRFGYSSSSDGDSLLSYVNIDTVPCQRSRLEEEKASAARSVEAPGSAAVYPHGCHLILCSAFPFDIHSLDKNPFVPFAHVPQPLTGVPPFQSSSAAPEDVGTALSVTRIEKKRTADQKCDMEQSGESSPRDDEASVSVPDCDPGRPSLPTITVKADEDEQSEAAESDTACGLSSVVVEEPPVNLADAEKGGYVSGTPSPACESRGDPAEREFPEKGQFFLIPKNEVESLVKAKTFLASIEAVAECGGFDFDVASGCTMWSSGMFRLLGADSSAGSPKSIEDVLVWFHPEDSARLLLVHERAVNEGVPFCIDLRTAQATHKPDSDSARSHASIVEVRGEVVRGDGGKGAVIRVCGTLQDVTKARLAEDTLRENKRSSLKAQEMAKMGRWEWSADDGEWTVWATELYRMHGIPVAVDGARDSVMGLSLPVAMDPNEPAVAIKPPSLKEYCDQYVHEGDRYAFETLVQAALQNGEDSFDLEYRILRGGNPDSVAFISIRGEKVVSENCMHADRTALSADLSMSTSLESASEESSSSSHDVSVVSLQPHVIVRGFMQDVSDRATAEKMLAESQFKSDFVTKVSHELRTPLTGIVGLTEILHRSGLSTEQQHYVSLIRQSSDGLLSLVTDVLDLAKMEYRKVRLAESAFDLLHLIEDTAELLSAQVEERRWVSRVTLM* # PASA_UPDATE: g179.t1, single gene model update, valid-1, status:[pasa:asmbl_3934,status:12], valid-1 NODE_2281_length_6899_cov_38.7091 . gene 2920 5567 . - . ID=g179;Name=g179.t1 NODE_2281_length_6899_cov_38.7091 . mRNA 2920 5567 . - . ID=g179.t1;Parent=g179;Name=g179.t1 NODE_2281_length_6899_cov_38.7091 . five_prime_UTR 5455 5567 . - . ID=g179.t1.utr5p1;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . exon 5183 5567 . - . ID=g179.t1.exon1;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . CDS 5183 5454 . - 0 ID=cds.g179.t1;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . exon 4876 4934 . - . ID=g179.t1.exon2;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . CDS 4876 4934 . - 1 ID=cds.g179.t1;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . exon 2920 4640 . - . ID=g179.t1.exon3;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . CDS 2953 4640 . - 2 ID=cds.g179.t1;Parent=g179.t1 NODE_2281_length_6899_cov_38.7091 . three_prime_UTR 2920 2952 . - . ID=g179.t1.utr3p1;Parent=g179.t1 #PROT g179.t1 g179 MISRRSDEAVTEEDYAEFEDLPRTVLYRRVLISERRLRNAETERDLLEQKNSLMHKRIALIEKEKNSAEEYVEELRAKLKTVGKELSELKRKRASDKEKKKDKKREKKAGGSSTDNVRPDALSAPNLAYDANTGYYYDTTTNYYYSADTGLYYDGISGTYYSRDPVTGTFNPYMNRDARSSQAIPNGTWDSRRQVVQWHTLRLVCVESDVLAEGSLVGEVPWDGMLILGRDKQPDDAPMLRIPSMDASKLHARIRCVVVRDDGGGAEDGELIGANTTVIGAGGSTAVPASGGRPTSAGGDIRSNVVTLSAADIAEAAASAVTALSSVSAVRYEVMDAGSRHGTWVNGVRLGESRCESAWHALSHGDQLSVGSATVLRVHLHGGCEACAPEHYARQSRDGDDSELSDMQGQGKRKHDHVVGAGDFARQYLEAVSSAPSGAPSHLVSAAPLAGGKMVPAVISAEPVLRPVSRDAGGGVDAGGEPHRHDADVGGDASGRKRALEDARRREQKRLRRELLLDSTGASTPDALESSLSPATVPPDASMALNAYRDRAAERRRLHPNDSINVRPSERADFQDGLDAIAASAPVTATQDTLLAEENKGFRMLVAMNWTPGAGLGSAGQGITAPLAVRAKDDRGGLGLSHGGTAGAAERTLLLSQKAQALRKTAERFART* # PASA_UPDATE: g178.t1, single gene model update, valid-1, status:[pasa:asmbl_3933,status:3], valid-1 NODE_2281_length_6899_cov_38.7091 . gene 242 2561 . + . ID=g178;Name=g178.t1 NODE_2281_length_6899_cov_38.7091 . mRNA 242 2561 . + . ID=g178.t1;Parent=g178;Name=g178.t1 NODE_2281_length_6899_cov_38.7091 . five_prime_UTR 242 431 . + . ID=g178.t1.utr5p1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . exon 242 730 . + . ID=g178.t1.exon1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . CDS 432 730 . + 0 ID=cds.g178.t1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . exon 881 1029 . + . ID=g178.t1.exon2;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . CDS 881 1029 . + 1 ID=cds.g178.t1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . exon 1324 1489 . + . ID=g178.t1.exon3;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . CDS 1324 1489 . + 2 ID=cds.g178.t1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . exon 1614 1822 . + . ID=g178.t1.exon4;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . CDS 1614 1822 . + 1 ID=cds.g178.t1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . exon 2057 2561 . + . ID=g178.t1.exon5;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . CDS 2057 2235 . + 2 ID=cds.g178.t1;Parent=g178.t1 NODE_2281_length_6899_cov_38.7091 . three_prime_UTR 2236 2561 . + . ID=g178.t1.utr3p1;Parent=g178.t1 #PROT g178.t1 g178 MFSLSWLTEALDGIASPNVYVRGDRLSQCPSHVAGKNGLGGWMHYPTTSIIFLVASVLCFGFTATTLLRYNTVRVLNKKIRTPNISNNTWILYFFAVAMRCVFECVLYVRDDEDTHANAGILLAAVVLYGVGNLMLALSLDHQRKHRSTVAVTSSKPQPVAQPTEESKEPRRTSSSSVMSFIASTESLFLSLFVFYIVCLFLVLMKNETAVYGWLFFTANVFQRIPVLVLGAIVALRENGADGPSRASRLCIAAGVALNIICDFPPSWWQAVLPDACPLYFASYVDILIAFFLVSLVLFFTFLRAEYLRNMEDCIWTTVSQIQEFNVRQFPSA* # PASA_UPDATE: g4908.t1, single gene model update, valid-1, status:[pasa:asmbl_9236,status:12],[pasa:asmbl_9241,status:12], valid-1 NODE_75_length_44173_cov_42.7635 . gene 32269 43375 . - . ID=g4908;Name=g4908.t1 NODE_75_length_44173_cov_42.7635 . mRNA 32269 43375 . - . ID=g4908.t1;Parent=g4908;Name=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 40302 43375 . - . ID=g4908.t1.exon1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 40302 43375 . - 0 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 39691 39992 . - . ID=g4908.t1.exon2;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 39691 39992 . - 1 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 39380 39493 . - . ID=g4908.t1.exon3;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 39380 39493 . - 2 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 37983 39058 . - . ID=g4908.t1.exon4;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 37983 39058 . - 2 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 37643 37756 . - . ID=g4908.t1.exon5;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 37643 37756 . - 0 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 37267 37445 . - . ID=g4908.t1.exon6;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 37267 37445 . - 0 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 35024 37108 . - . ID=g4908.t1.exon7;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 35024 37108 . - 1 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 33246 34788 . - . ID=g4908.t1.exon8;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 33246 34788 . - 1 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 32865 32980 . - . ID=g4908.t1.exon9;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 32865 32980 . - 0 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . exon 32269 32712 . - . ID=g4908.t1.exon10;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . CDS 32376 32712 . - 1 ID=cds.g4908.t1;Parent=g4908.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 32269 32375 . - . ID=g4908.t1.utr3p1;Parent=g4908.t1 #PROT g4908.t1 g4908 MAVGVEGDRGDAGPSSTLSPSASSSASHENVTASLTSVDTAGVGAAHRTNGRPITAMMRESFPRNSPGVVLPPVLLALPTTAVPAAGYRRLSARAGFAWSEVEQLVYGPDDWIAAVLKSESSIVKFQIETKLFDGLFRTSLDESSTSTEDESNDAVPVSLSRWVGPAGGFVRIAAMYSAIIAVGKDGVVYQWQWSSASEGDGRGVHPLWGVLGGASGGVDGQGERAVDVSASLARCTVMSATGRCATFYDETVRRTLSHSAVSSLGVLEGLEHTFDFRPLVGRREGVSAPTDVLKTDPAISLATSATATFAITKSGRLLRWGFFGVASSSSSPASASSGSDAKKLSASASSTADKKTEKDAAADSSAATATVLAAKKGDRVYNRKLLDTLAQNVIALCCSLHPGPDGMHIASDLVVGHLTEKPASASTGKTSASAQSGQSGESWLVTSSEYGSSVPGGAFNAVANAGQLIPLVVPSAALPCPIGHIVGIDGSNAIVRIASTAATDTNGDAGSGEYRIFDLASLAPVSSNENESISADAKDDIVRRFGQCVCEPTPVDIDDGIAAVAVTCAYPDVHVLACAKSGQTEACDTAQACALFYCRMWHDDNAKQAESKEMAGKASSSSNFQCLVCSSKFSSRNRLFLHLAEQGHAVNARVTSAGGRFTNLGIAPPPTASFRIVPDPREKGTALLLDGNGFLYPLSAASINKPETLASILALSPAVNGKSASPAQPPPSPPATPLPLAALVASFVACETTVRGPFGVRTYRMCIGYADGRSPSSASGQSTVAALIARGALPCGRNALHECVAAEQLDEALSMVGEARFWWMLQERDWHGDTPLSLAVKEQRLGVASHMLFLLQKWSLIAKTAAAADAQPSARSLSPSPTTTPVMGDPFGVCEAFIRLLATGGDVDDKVAGTAGTGTSGASSLASNNATSTGSGPADDVHGASEFYIRDWTAAADQLSVHGAAKLHADKVILVPDSRNKTGVVWRRARVPLAGGFETSFSFSIQNGGIQPADGFAFVIQNVGPQRVGEGAEQLGYGGIARCLAVEFDVYSNENLDDPLLPHVSVQSRWEADNNAHHRYSLGCCENPPAITEGNTHVCTVRYFQAPNRMDIAIDGVSLFAVEFGTNSIATICDKNGEAFIGFTASTSQLKAEFHVADWAFKADVRQEVPLVKLLLEKKAYAALEELDFGVLPLSTFASLVDGAPADVPSTPLQDHPALREFVSDTATPTLTLDALLPVAVLDSLLTTIKPGKTVAGILAGLKEAAAQFGVEVHARNTHLPLAALLPADVALRALARMWQDGLRGRMIAWISASRPELFAASSPSLGTSPFLECLRTGRYHLADCIVKSVASSSGRMDALMGRLLASRDSAGQTVLHAIAARASQTQTQTQTQAQSAGAKGATGSSDPVDASRVRSLVADFFAYCAASRPDIMWARDSQGKTAVSLAIASGNPAIATAILATALKHQKDAEAAARAALQNGTPAKIAPIPAQFWEELFASADYPAFATTESTASPSTPVDKGKKAGISLLHRLMVEASRGQHGSAHYWKSLSMQDGIQFALGLNNCTSVVSGREYPTQRYYTCIDCRPPVDGEIILAACEACIAVCHRGHKIGKEHYAGFFCDCGAGELKVKCSVNKLSELVVGDTRKHTDGPAIDQKLDLIRVATECAGRYCASALGEVSRGVSPLGAALYAGRYAEAHALLSAAVPLCADAASGRDSDAHHVTNANGCGSHTKGVLRRADSFDDGLGCGAAEQVPESAATKKISADSKPPEIYNLSDLAKYVSSCKQLSAESALHVTRALSAQDPRGNTALHYATVMLGRRDKEARQYHGAFPPTTAAGSAPSLSSSSASASVGGSRECDSKAAAGDEPSCALRGPLAILPLLTSVGGLARQRNATGETPLLLYVKGLAGLQGPPPAPSAADDETNAAAAPRDSAADGAAFELSSIPRKHAVLLDRELLSWESVRESLLVGTSDLQGISDAGEGDASSADPWDNDRTARLDSFVSSLLSLRHPYSAVCFSVVQSLSRAYAEETRKPHNDDGTTPGGRKEWTVAAIVQRFVKSCVRVFVVRCLSPESVESVLPDPRHAALIATYRQNASSVWLRFPSLAIVALTDASSALFAPIANGTVETFLQETPDKNDPLDARQWVGSNHPRVWATGARGEAGAGPSDAARPFVPKDFDWAMFPPDEYSQKRVVGVARTFARVIREIADLSCVLQARDAEAAGALIDGVDGASAPAPVVPYGVLHSLRHSLATPVKWLTATMDALESRLRFGRRLPLPGPMPSMAAYLLSLMRGRTNDHGDTRAAVSVSSLGHVGFVLDAFLYCMRIHPELLAGGDVHASSATPQRTGNGKGKDRELVDSSPRPFLAHPRHQHGTPLPKHDSFFQKSHSISPYLTACDDFDMPIYEAPLRQALPLAFNPTLMNESAVGLPVFQATSATPNNPPADVRLFPDISAVDHYRNSDGTAASGVSGGLLGGQWGPLAGKGYEDVTERWWLGLRVMGRALFGPMCIEKDSFVVNAVDFDTKATHFRSQMDSLKSGSTEVDLSRIVRPDIVRTSFKQLDAHFTRLARSDNGGGGGWRDSGGWGAGTVVVRFVDEQGGGSGVTRGWFTALAEALTNLKRIGPEAPGEGGAGGTPAGGVSGGGGGHASHELDAFTWPEALLFEPGPAGFFAPRHHACLATGRDGGAEAKRLRTLYMCIGRFIGLALSEQQTIPLALSRPVVKFLLGRRLFSHDLAFYSPTKYESLRRLLVMPPDELEGCNLTFVAPRAPEEGGGEVGLLDGGAGENVPVTADNVHEYVKRHARFIMVDNVLPALEALRDGFQQILPILAFSYVTPEEFHLLLNGCGWEVDIAKLKLCTVFDREGVNDEDSSSMEGWFWDILGEFEGEERNKFLYFTTGSTRMAADSSRFSLKVHIVPCTNTTDSRQCSRSRCVHLPTAAACFMRLNVPLYASKDIFKEKLLYAVNNCVSYQLH* # PASA_UPDATE: g4903.t1, single gene model update, valid-1, status:[pasa:asmbl_9235,status:12], valid-1 NODE_75_length_44173_cov_42.7635 . gene 14213 17277 . - . ID=g4903;Name=g4903.t1 NODE_75_length_44173_cov_42.7635 . mRNA 14213 17277 . - . ID=g4903.t1;Parent=g4903;Name=g4903.t1 NODE_75_length_44173_cov_42.7635 . exon 15436 17277 . - . ID=g4903.t1.exon1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . CDS 15436 17277 . - 0 ID=cds.g4903.t1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . exon 15101 15217 . - . ID=g4903.t1.exon2;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . CDS 15101 15217 . - 0 ID=cds.g4903.t1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . exon 14877 15011 . - . ID=g4903.t1.exon3;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . CDS 14877 15011 . - 0 ID=cds.g4903.t1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . exon 14570 14791 . - . ID=g4903.t1.exon4;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . CDS 14570 14791 . - 0 ID=cds.g4903.t1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . exon 14213 14469 . - . ID=g4903.t1.exon5;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . CDS 14308 14469 . - 0 ID=cds.g4903.t1;Parent=g4903.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 14213 14307 . - . ID=g4903.t1.utr3p1;Parent=g4903.t1 #PROT g4903.t1 g4903 MVWIELSPTATTRASDEITHEGYALRSKRKRTGADENDAGDGSDAAGSPTLLLSSSSRESRSSRRLAARLPAGTVTLKKPVADAAAQRTRRAAQRKRLTRSLKAHSPSQGQDQADSDAEANRARASTSDADAAKCHSECATSRDGDADAADEMPAKRVRLSPLNLLAFCLKTVCNLFGVTDAAPGLQSCSGSTTETEGAPDVSPASDGGIAAESETEDATKVSVSVFADNMDVCNSSNQHTHVRSVIEGGIADAHNEGAVALAAENAIIYPTFDIATENAIRAELSLSRTPSLDTHIAPEPEGQAHDYLEHAASQASAVHLEECAIGINAFFSVDDVESAVKSESPQLIEAAVDCVHMDVDGVANDFAAAASPVGAEAGGTPTAPTCLHATADEAREPFSADPLDDIPLCRIASHLTVPMNWIAFPGAAVNPGMMHSNINIARAAVSRGDHADPSHSQMLSAHTPTFRQSRYLTNSPSPLSPNFGHSLHVTVQFNSQRVEYDSFLRMVADQKLRYSTLRTASAASDAPKPSNSLPPATESLAHGSQDRHKHQPTKSQPRPTVETACDITQSSEWTRWVAEWRAKLESAALEEQTHVPGSAIIRLRERDRDFDLQVNAAWGQGNLSDTLVTGKTATISRRDIATLSGTNWLNDEVINFYVGLVSERGGGKVHCFNTFFYKKIMDMEPFDFGKIKRWTRKFDIFSKEKLIVPIHLEVHWCLAVINLGERRIEYYDSMGHDNPPCMARLREYLSGEAAERKYQINLSQWSDYAPKNIPQQNNGCDCGVFLCAFADHAARNVPFAFSQKDMQGIRRRMAFEILTQKLLT* # ORIGINAL: g4904.t1 original gene structure, not modified by PASA # ORIGINAL: g4904.t2 original gene structure, not modified by PASA NODE_75_length_44173_cov_42.7635 AUGUSTUS gene 17988 21003 . + . ID=g4904;Name=g4904.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS mRNA 17988 18356 . + . ID=g4904.t1;Parent=g4904;Name=g4904.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 17988 18356 . + . ID=g4904.t1.exon1;Parent=g4904.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 17988 18356 . + 0 ID=cds.g4904.t1;Parent=g4904.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS mRNA 17988 21003 . + . ID=g4904.t2;Parent=g4904;Name=g4904.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 17988 18338 . + . ID=g4904.t2.exon1;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 17988 18338 . + 0 ID=cds.g4904.t2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 18453 18585 . + . ID=g4904.t2.exon2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 18453 18585 . + 0 ID=cds.g4904.t2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 18785 19430 . + . ID=g4904.t2.exon3;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 18785 19430 . + 2 ID=cds.g4904.t2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 19683 20276 . + . ID=g4904.t2.exon4;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 19683 20276 . + 1 ID=cds.g4904.t2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 20375 20480 . + . ID=g4904.t2.exon5;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 20375 20480 . + 1 ID=cds.g4904.t2;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 20899 21003 . + . ID=g4904.t2.exon6;Parent=g4904.t2 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 20899 21003 . + 0 ID=cds.g4904.t2;Parent=g4904.t2 #PROT g4904.t1 g4904 MRIPEGHSRRLFTYLGLLLAGSACFIVGAAIAANAAEKGMLQSIRNYDFMTLWGGAEDEDAADWGMQDAGKGALQKEFKYAFVVVPNEPESAPHVYTGNDFNVFGHLGIQRRYLTMQVMMQT* #PROT g4904.t2 g4904 MRIPEGHSRRLFTYLGLLLAGSACFIVGAAIAANAAEKGMLQSIRNYDFMTLWGGAEDEDAADWGMQDAGKGALQKEFKYAFVVVPNEPESAPHVYTGNDFNVFGHLGIQRRYLTMQPRVWHYTTNIAAANLILVSSIHFPRQTPYFNWDELSKPKPKDGAVMPGAVGFPRVISHFPPKRAYLADRVLRAIGVSWMQMFELRSKVRARCFLGLKMDVAKCLGHYARRHPEINIDMFYPKSFIFTDDPKAFNVTATQFLAYHANLLLKMQPTIPLSDVSMESVSGKSLPPLLNTNATAGEDELDQPASEDDVGMVNYGGSGDVEEDAERTEAQEDPEPRAAAGIAGTRRLLEVSRNAEAPKEVSGVGLTMPRWLVKLGTRGFGGEGIRVFSDTAALISVVKQGVKEGPLVVQRLIDDVMTFRGRRFDLRVYILVTSLSPLTLYINVQGTVVRLAAGDAKPPAAVNAGGQGGSATDGADDASEQSEYDGNAADAVSPGAQQSAGSNGELDRRKFLTNFSVHHDASALVTLDELLAYFRSIKLLGVWKDRTLPSIKRIARRVFSLWNTHEHRKYSYKLWGIDIMLDSDMNPWYIEANPKPMMFGLTKANFKNQHRIMVADMFKVVFWRHYGQAMQPSGTWEIIPADV* # PASA_UPDATE: g4902.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9233,status:12], valid-1 # PASA_UPDATE: g4902.t1, single gene model update, valid-1, status:[pasa:asmbl_9232,status:12], valid-1 # PASA_UPDATE: g4902.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9234,status:12], valid-1 NODE_75_length_44173_cov_42.7635 . gene 12204 14151 . - . ID=g4902;Name=g4902.t1 NODE_75_length_44173_cov_42.7635 . mRNA 12204 14093 . - . ID=g4902.t1.1.5b6be70c;Parent=g4902;Name=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 14074 14093 . - . ID=g4902.t1.1.5b6be70c.exon1;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 14074 14093 . - 0 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 13946 13981 . - . ID=g4902.t1.1.5b6be70c.exon2;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 13946 13981 . - 1 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 13095 13282 . - . ID=g4902.t1.1.5b6be70c.exon3;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 13095 13282 . - 1 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12875 12929 . - . ID=g4902.t1.1.5b6be70c.exon4;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12875 12929 . - 2 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12574 12748 . - . ID=g4902.t1.1.5b6be70c.exon5;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12574 12748 . - 1 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12204 12463 . - . ID=g4902.t1.1.5b6be70c.exon6;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12287 12463 . - 0 ID=cds.g4902.t1.1.5b6be70c;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . three_prime_UTR 12204 12286 . - . ID=g4902.t1.1.5b6be70c.utr3p1;Parent=g4902.t1.1.5b6be70c NODE_75_length_44173_cov_42.7635 . mRNA 12204 14093 . - . ID=g4902.t1;Parent=g4902;Name=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 14074 14093 . - . ID=g4902.t1.exon1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . CDS 14074 14093 . - 0 ID=cds.g4902.t1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 13946 13981 . - . ID=g4902.t1.exon2;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . CDS 13946 13981 . - 1 ID=cds.g4902.t1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 12875 13282 . - . ID=g4902.t1.exon3;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . CDS 12875 13282 . - 1 ID=cds.g4902.t1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 12574 12748 . - . ID=g4902.t1.exon4;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . CDS 12574 12748 . - 1 ID=cds.g4902.t1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . exon 12204 12463 . - . ID=g4902.t1.exon5;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . CDS 12287 12463 . - 0 ID=cds.g4902.t1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 12204 12286 . - . ID=g4902.t1.utr3p1;Parent=g4902.t1 NODE_75_length_44173_cov_42.7635 . mRNA 12204 14151 . - . ID=g4902.t1.2.5b6be70c;Parent=g4902;Name=g4902.t1 NODE_75_length_44173_cov_42.7635 . five_prime_UTR 14094 14151 . - . ID=g4902.t1.2.5b6be70c.utr5p1;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 14074 14151 . - . ID=g4902.t1.2.5b6be70c.exon1;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 14074 14093 . - 0 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 13946 13981 . - . ID=g4902.t1.2.5b6be70c.exon2;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 13946 13981 . - 1 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 13074 13282 . - . ID=g4902.t1.2.5b6be70c.exon3;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 13074 13282 . - 1 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12875 12962 . - . ID=g4902.t1.2.5b6be70c.exon4;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12875 12962 . - 2 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12574 12748 . - . ID=g4902.t1.2.5b6be70c.exon5;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12574 12748 . - 1 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . exon 12204 12463 . - . ID=g4902.t1.2.5b6be70c.exon6;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . CDS 12287 12463 . - 0 ID=cds.g4902.t1.2.5b6be70c;Parent=g4902.t1.2.5b6be70c NODE_75_length_44173_cov_42.7635 . three_prime_UTR 12204 12286 . - . ID=g4902.t1.2.5b6be70c.utr3p1;Parent=g4902.t1.2.5b6be70c #PROT g4902.t1.1.5b6be70c g4902 MSQNPYGSFPQYAGQPQPGYGQPGAPQGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPPQGYPGAQPGYPAQQGYPQQPAYGGAQYAAVPQTYTRPALSYPGTYSPHAAFAIPVGINPVQQQKMMQASAVFRMFDKDRSGNLNKKEWKKAMAHLGYHMEKHQRKHLFKMIDRDGSGKVSEREFCEYWMST* #PROT g4902.t1 g4902 MSQNPYGSFPQYAGQPQPGYGQPGAPQGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPGAQPGYPGAQPGYPGGQPGAPQGYPGAQPGYPAQPGYPAQPGAPQGYPGAQPGYPPQGYPGAQPGYPAQQGYPQQPAYGGAQYAAVPQTYTRPALSYPGTYSPHAAFAIPVGINPVQQQKMMQASAVFRMFDKDRSGNLNKKEWKKAMAHLGYHMEKHQRKHLFKMIDRDGSGKVSEREFCEYWMST* #PROT g4902.t1.2.5b6be70c g4902 MSQNPYGSFPQYAGQPQPGYGQPGAPQGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPGAQPGAPQGYPGAQPGYPPQGYPGAQPGYPAQQGYPQQPAYGGAQYAAVPQTYTRPALSYPGTYSPHAAFAIPVGINPVQQQKMMQASAVFRMFDKDRSGNLNKKEWKKAMAHLGYHMEKHQRKHLFKMIDRDGSGKVSEREFCEYWMST* # PASA_UPDATE: g4899.t1, single gene model update, valid-1, status:[pasa:asmbl_9237,status:12], valid-1 NODE_75_length_44173_cov_42.7635 . gene 134 4229 . + . ID=g4899;Name=g4899.t1 NODE_75_length_44173_cov_42.7635 . mRNA 134 4229 . + . ID=g4899.t1;Parent=g4899;Name=g4899.t1 NODE_75_length_44173_cov_42.7635 . five_prime_UTR 134 134 . + . ID=g4899.t1.utr5p1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . exon 134 601 . + . ID=g4899.t1.exon1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 135 601 . + 0 ID=cds.g4899.t1;Parent=g4899.t1;5_prime_partial=true NODE_75_length_44173_cov_42.7635 . exon 917 1393 . + . ID=g4899.t1.exon2;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 917 1393 . + 1 ID=cds.g4899.t1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . exon 1582 1777 . + . ID=g4899.t1.exon3;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 1582 1777 . + 1 ID=cds.g4899.t1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . exon 2061 2271 . + . ID=g4899.t1.exon4;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 2061 2271 . + 0 ID=cds.g4899.t1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . exon 2568 3563 . + . ID=g4899.t1.exon5;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 2568 3563 . + 2 ID=cds.g4899.t1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . exon 3743 4229 . + . ID=g4899.t1.exon6;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . CDS 3743 3990 . + 2 ID=cds.g4899.t1;Parent=g4899.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 3991 4229 . + . ID=g4899.t1.utr3p1;Parent=g4899.t1 #PROT g4899.t1 g4899 YLSQYDKKTLRRVIQMCQSFFSQSVSAATETEWQLNCARDLMDSKVYCALVNALAPGTFVVRMMLNDRTTFEMATWAMDGLLLVPRCLLPTDMVRATFDPIATLAYLAMFFRGAVAFRGGEELLRTMKTVQTSINDGRRELRLLKPLGDPMAELDRQKSLEREVALREKRFRELVMKAKADRVDDMMSRLTSMVKDAHQAVRVAMQRRYNIMDVTANSTVAGFAALHMVNLAITRGQCGFFLVTKNEFVSSERTIVLRKRAEPEVLVDEHDRPSSRELLGMADEAVAQIVPERFPAWEIFISCQSLNTLLHKGEKFMYQMFPSSLEQSTKELHKAAKGGKMGVLRELVNFFHADRPGFVDGIDTTTGSTTLHAASKRNHVEMANFLLEHGGSLDAKNRRSRTPLHVACEAGHLKVSRVLIEHGANTSIRDRDGNLAFDMMRNPMHRQQIMDIEQRYRALLAAMHDGNVACILTRAQQHKAGTDLFNIRLVTESGDTLVHVAARAGHHELASILLSRGCKVNARNKLGRTPLHDAATMAVVEVLIDYNANLSIQDSEGNTALHYAAAAENGMAMVRLLLQRGSKTKTKNTSGETPIAVACRFGRTECLLTLLEMDPEAAERPPLVVAAEYGHGDTVRALLDRGVKVERPVLTQTLGAALVKGKENPNCIDVVKLLIEKGASVQVPYAGGNTALHLATLGNRPDVCAFLFERNVLVNARNDLHETPLHIAMRNDNMRMAELLVANGSDGTVKTKTGLTPYDYIGNLTLWQEYTFKSVVIKMGVKAYANRKERKDFLDIALRLEQKRTDRREKEEREQAEIMERRKQQRILITLPRNFLANQQAISESPVPPVQVHLSSTPEGPERT* # PASA_UPDATE: g4901.t1, single gene model update, valid-1, status:[pasa:asmbl_9238,status:3], valid-1 NODE_75_length_44173_cov_42.7635 . gene 10572 12199 . + . ID=g4901;Name=g4901.t1 NODE_75_length_44173_cov_42.7635 . mRNA 10572 12199 . + . ID=g4901.t1;Parent=g4901;Name=g4901.t1 NODE_75_length_44173_cov_42.7635 . five_prime_UTR 10572 10693 . + . ID=g4901.t1.utr5p1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 10572 10793 . + . ID=g4901.t1.exon1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 10694 10793 . + 0 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 10999 11142 . + . ID=g4901.t1.exon2;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 10999 11142 . + 2 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 11227 11331 . + . ID=g4901.t1.exon3;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 11227 11331 . + 2 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 11430 11515 . + . ID=g4901.t1.exon4;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 11430 11515 . + 2 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 11624 11794 . + . ID=g4901.t1.exon5;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 11624 11794 . + 0 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . exon 11958 12199 . + . ID=g4901.t1.exon6;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . CDS 11958 12062 . + 0 ID=cds.g4901.t1;Parent=g4901.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 12063 12199 . + . ID=g4901.t1.utr3p1;Parent=g4901.t1 #PROT g4901.t1 g4901 MPLAEMATVKKEVVMSSNMKLKNRLDELAKHTHFSRLDLDGLHARFKHFTPPPHAEKIDRAKFRDVLHDLFDIDDSLLMDRVFRTFDRDNDNMISFDEWIAGLSVILKGTLDEKLKFCFNVYDLNGDGYISKEEMFQMLQKCLIKQSSDEDPDEGIKDLVDLILKKMDHDRDGRVSFADYRETVQAEPLLLEAFGTCLPAQKRRNAFLASCTDAPKTSHHIKQSSSASSAAATAKK* # ORIGINAL: g4906.t1 original gene structure, not modified by PASA NODE_75_length_44173_cov_42.7635 AUGUSTUS gene 26715 29473 . + . ID=g4906;Name=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS mRNA 26715 29473 . + . ID=g4906.t1;Parent=g4906;Name=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 26715 26996 . + . ID=g4906.t1.exon1;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 26715 26996 . + 0 ID=cds.g4906.t1;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 27484 27588 . + . ID=g4906.t1.exon2;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 27484 27588 . + 0 ID=cds.g4906.t1;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 27797 27892 . + . ID=g4906.t1.exon3;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 27797 27892 . + 0 ID=cds.g4906.t1;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 28021 28087 . + . ID=g4906.t1.exon4;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 28021 28087 . + 0 ID=cds.g4906.t1;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 28257 29473 . + . ID=g4906.t1.exon5;Parent=g4906.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 28257 29473 . + 2 ID=cds.g4906.t1;Parent=g4906.t1 #PROT g4906.t1 g4906 MTLAEERDLALARLKKASDARLFSVFDFESDPRRVFAAHEVAAMCEGSFSTKMTVQWNLFGGTLLKFGNRERFEKILKGVDTLDEVGCFALTELGFGNNAVEMETTATYDPSTQEFVIHCPTTLSQKYWITNGQRHAKWAIVFAQLLSLGENHGVHGFLVQIRTDDIKNTMPGVTCQDMGLKLGLNGVDNARIWFDHVRVPRTSLLNAFTDVAPDGTVTSRIPSRRGRFLKMADQLLSGRICIAAMSLTAAKHALLVAIRYSESRLAFGKTGKSDRPIMANQLQQDALVPLLAETVALNVALNHVKNEYARETTTTAAHGGDVTNELLRLCCVIKPLITWHLVRAANICRERCGGQGYLLVNRFGEFIMGGHSGATAEGDNAVLMQKVAKELMTTVSKRAYLTQTAWYYVPWIARRIIAATWDTVRGFDPLALARYREGVLIYELASRMQAARRAGGSDMTRVFEAWSDESSQLVQDAAAAYGERVVLEQTLKAAREHKSATLSVVAQLVGLLLVQRHLEWYLCDGAVGPSGGRWVHAQVSRLTKRVHALGGDILAAFGIPEHLVTAPIAKDWRAYNVKENDNEGRPM* # PASA_UPDATE: g4907.t1, single gene model update, valid-1, status:[pasa:asmbl_9240,status:12], valid-1 NODE_75_length_44173_cov_42.7635 . gene 29578 31759 . - . ID=g4907;Name=g4907.t1 NODE_75_length_44173_cov_42.7635 . mRNA 29578 31759 . - . ID=g4907.t1;Parent=g4907;Name=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 31708 31759 . - . ID=g4907.t1.exon1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 31708 31759 . - 0 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 31543 31610 . - . ID=g4907.t1.exon2;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 31543 31610 . - 2 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 31301 31376 . - . ID=g4907.t1.exon3;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 31301 31376 . - 0 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 31039 31121 . - . ID=g4907.t1.exon4;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 31039 31121 . - 2 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 30760 30891 . - . ID=g4907.t1.exon5;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 30760 30891 . - 0 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . exon 29578 30525 . - . ID=g4907.t1.exon6;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . CDS 29680 30525 . - 0 ID=cds.g4907.t1;Parent=g4907.t1 NODE_75_length_44173_cov_42.7635 . three_prime_UTR 29578 29679 . - . ID=g4907.t1.utr3p1;Parent=g4907.t1 #PROT g4907.t1 g4907 MARAGFAVAILIALVAAASAAMNDAGLDNVIESFGTTARNVAGVADAAKRCSALEGVVELALRHHGERLARLHSVAASTIAGVLSSAEVKTKIHSDIDALADWMVASSKAEWADDESLLASDLEDEWNGRFRTWFSQTVKQRKDEDFSANEPAKQPKVNVHARDAKEARPERPNRRRVMEDADNREDMRRRMADTDVEERTKQWEKDFEQRREERRKMREDMERDWATKFDRPDSPRRPGAGDDVEGRIKELRESMDRRRRGSDVDGDDSMIGPQPRGGPSRRSADAGAAPSEDIDYDTAEGKCRACQLSFGWIHEELKRFLERPGFGLSDNLMMAGAHRACSKHVIGRDYGAGAWDDADRRRRGPSMWMAMRKDCIDMADRHRGDMRRIAEQGSPAEAVRFVCEEKERVCHSNKDEL* # ORIGINAL: g4905.t1 original gene structure, not modified by PASA NODE_75_length_44173_cov_42.7635 AUGUSTUS gene 23527 26139 . - . ID=g4905;Name=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS mRNA 23527 26139 . - . ID=g4905.t1;Parent=g4905;Name=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 25803 26139 . - . ID=g4905.t1.exon1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 25803 26139 . - 0 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 25509 25694 . - . ID=g4905.t1.exon2;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 25509 25694 . - 2 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 25259 25374 . - . ID=g4905.t1.exon3;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 25259 25374 . - 2 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 25002 25151 . - . ID=g4905.t1.exon4;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 25002 25151 . - 0 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 24568 24640 . - . ID=g4905.t1.exon5;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 24568 24640 . - 0 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 24244 24338 . - . ID=g4905.t1.exon6;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 24244 24338 . - 2 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 23966 24035 . - . ID=g4905.t1.exon7;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 23966 24035 . - 0 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 23773 23851 . - . ID=g4905.t1.exon8;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 23773 23851 . - 2 ID=cds.g4905.t1;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 23527 23629 . - . ID=g4905.t1.exon9;Parent=g4905.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 23527 23629 . - 1 ID=cds.g4905.t1;Parent=g4905.t1 #PROT g4905.t1 g4905 MDDFVFVRAGVTLDALRTQRAVRLHANWPAHVNGVSGISGEGIPGCVGHGVDVAGVDAVPTLSAGECMQGDIALFYVGGNARALDADCSHGGGPLECGFVDIDIEDIANADKACVVACPWHGFEFDLHTGLSSSGFSQRVHETAVGGDGHVLVRVSRGTTLRPVASDAHPAPGTDPSALLASMNLLAMTLSAAPQTVCEWAVRILLTADPAEKIAATESAVAAWHSGLLSIGHAVAPDEPSRQHSLVVVQPGMAGKRGRGGTLANRIALLHSLANIEQWAIDLAWDIVVRFASFECGTGGSLPLGFFTDFINVAADEAKHFKMLAERLSALGSHYGALPVHAGLWQSARDTADDLMARLAIVHMVHEARGLDVHPKTIARFQSNGDVDSVAMLNEIYTVRAH* # ORIGINAL: g4900.t1 original gene structure, not modified by PASA NODE_75_length_44173_cov_42.7635 AUGUSTUS gene 4643 8520 . - . ID=g4900;Name=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS mRNA 4643 8520 . - . ID=g4900.t1;Parent=g4900;Name=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 8030 8520 . - . ID=g4900.t1.exon1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 8030 8520 . - 0 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 7856 7940 . - . ID=g4900.t1.exon2;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 7856 7940 . - 1 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 7496 7619 . - . ID=g4900.t1.exon3;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 7496 7619 . - 0 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 7149 7296 . - . ID=g4900.t1.exon4;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 7149 7296 . - 2 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 6966 7033 . - . ID=g4900.t1.exon5;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 6966 7033 . - 1 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 6378 6538 . - . ID=g4900.t1.exon6;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 6378 6538 . - 2 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 5974 6243 . - . ID=g4900.t1.exon7;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 5974 6243 . - 0 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 5552 5843 . - . ID=g4900.t1.exon8;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 5552 5843 . - 0 ID=cds.g4900.t1;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS exon 4643 5373 . - . ID=g4900.t1.exon9;Parent=g4900.t1 NODE_75_length_44173_cov_42.7635 AUGUSTUS CDS 4643 5373 . - 2 ID=cds.g4900.t1;Parent=g4900.t1 #PROT g4900.t1 g4900 MRRGGSLNSTAPAALGGSTSSSSQQQQQQQQQQQQQALRGAAIPPPSPDVVDMEEPLAGMLPGGQSQSSEAMFAAAEKDKSDLSRLLVLLKAPLRPATSAGLGVGVGGGTGGPPKRAGNQQSEAEALEQFVARYRDQYEFSTLPLAALFQEIFDALVRHRLCSRDWMERAPRDNVLRILQCLRVLMRDQAFQREFFNLGGIKFLSDKLSEATEAYFRDDRQEPFIIETLVEMSSIFQKLATEVNQREWIVACGTHRTLALLLSANDIMILHCSLLALIWLARSEQPRSLIGELNCIEILLRIMQARAAIRALREWKRVASSMSTMRVMLMRAGLHSRDVSLRRTFLAWKAWCAQRTVMRSRAKEFRRRSDAMLLARVCESWRRQHMEYQREAVATSIALRFWSKSLQRRVFTALVEYCTRRRMKREREKEAIEFRRLRLIKRGAAQWMKVATESSHQRVEELATARAGVTVSLFRIVHTCAMRWWHKTIARRLDRQRRGIFGRGAQPAAATSSLRAAAAASTADAAPPACADGKLSVGASAPRHGHERVRIAAADGPLRPPVNGRANNPPPPPVASRDPSLEPTYLAVARATSQRPPPRRPLALLEGWDAATDARHVSSRVSNTVHEPLRQSADTDGRRQAHALPDTHVSDKRSTAARAGAAENVNSSEYVRAPEHTGRGRRDNIRAPSGVEGSRDRESGLGGHAPQSSLLSSLKADGDDDDVARELVSIERAIALHARLRKHRADVALLGGSAAELRATDERIRSDAENIRSLMVRIGDLTARVGAPV* # PASA_UPDATE: g13367.t1, single gene model update, valid-1, status:[pasa:asmbl_5857,status:12],[pasa:asmbl_5858,status:12], valid-1 NODE_3298_length_3801_cov_34.4028 . gene 684 3796 . - . ID=g13367;Name=g13367.t1 NODE_3298_length_3801_cov_34.4028 . mRNA 684 3796 . - . ID=g13367.t1;Parent=g13367;Name=g13367.t1 NODE_3298_length_3801_cov_34.4028 . five_prime_UTR 3743 3796 . - . ID=g13367.t1.utr5p1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 3673 3796 . - . ID=g13367.t1.exon1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 3673 3742 . - 0 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 2865 3275 . - . ID=g13367.t1.exon2;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 2865 3275 . - 2 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 2431 2650 . - . ID=g13367.t1.exon3;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 2431 2650 . - 2 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 2085 2230 . - . ID=g13367.t1.exon4;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 2085 2230 . - 1 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 1746 1881 . - . ID=g13367.t1.exon5;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 1746 1881 . - 2 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 1439 1574 . - . ID=g13367.t1.exon6;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 1439 1574 . - 1 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 1009 1146 . - . ID=g13367.t1.exon7;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 1009 1146 . - 0 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . exon 684 812 . - . ID=g13367.t1.exon8;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . CDS 741 812 . - 0 ID=cds.g13367.t1;Parent=g13367.t1 NODE_3298_length_3801_cov_34.4028 . three_prime_UTR 684 740 . - . ID=g13367.t1.utr3p1;Parent=g13367.t1 #PROT g13367.t1 g13367 MYVSIRTTSNPDGEVRGQLVQDGPQRFSSKLLQKNATLEEELAAEQSASNRTVCTFQYSNHTSQMYPTRFFSTIPLSSILSIDIVDNEAPESDEPVFSLALATPDENGEAPDGIIIDMDQVFNLAAWDSHKLYVGRLACRVTLNNENATQWQGTLEYVENECAFNALLTGFDGNPLLDGLSANSFNNVTKEVLSLFTGQRLGDENTTSVDYVVGKPRQGANEAIIFAWNSTANSLNSTVPSNVYFGVNPTQEAELLAENVAVIINSIEEPNGHLGGQLLAPTEVIEFYAIMNASNTIPSNEGQNDYYGVMYAVYDNQSHLMVVETFRSNVPIADVTHAGLRRGSIDSNGDPKNEDAVTISEGVAPNVTLYSDQPWFLYQEEHEALFAGNMYAFIATSDFPNGTIRGQVQMIPSNSSRPQLGSFLGFPISLVKSVFNPFPTCE* # ORIGINAL: g8145.t1 original gene structure, not modified by PASA NODE_2850_length_4970_cov_39.819 AUGUSTUS gene 2350 4920 . + . ID=g8145;Name=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS mRNA 2350 4920 . + . ID=g8145.t1;Parent=g8145;Name=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS exon 2350 2524 . + . ID=g8145.t1.exon1;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS CDS 2350 2524 . + 0 ID=cds.g8145.t1;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS exon 2735 3166 . + . ID=g8145.t1.exon2;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS CDS 2735 3166 . + 2 ID=cds.g8145.t1;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS exon 3486 3915 . + . ID=g8145.t1.exon3;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS CDS 3486 3915 . + 2 ID=cds.g8145.t1;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS exon 4196 4920 . + . ID=g8145.t1.exon4;Parent=g8145.t1 NODE_2850_length_4970_cov_39.819 AUGUSTUS CDS 4196 4920 . + 1 ID=cds.g8145.t1;Parent=g8145.t1 #PROT g8145.t1 g8145 MGRSGHAGEMMGLFFERGRIHSTLAIGSSGCAAIRAFIVVIIALALCSSPVAAALGDKACVGLFVIRSETDISALADCTTIEGQLEISNSSLTSITQAHFPRLTYISGTVNVTANPSLVSFDSMYWLARVGEAIVFERNPVLTEIRGFRSVQIVYDDIGIVNNPVLRTVDAFDVLEQVAVLGIMWLPKLTYFPPLANLTRVLGDLVLSQLDSLAVVDSFSRLEYVGGRLLLYRNMRMQSVRSFSSLTRLGGAFLAALMPLLRDLCLPYAVERVSGSFVLAHIPLANVSSCDPRVTSSRLRDVTGDLLISNAGNVSSALASLETVGGSVTVRLLRSEGLLNALSNLSYIGRDFTVTGLPDVTFDTSLLSSLTIVGGDVVISANTFLRNLGGFASLSTVGGSVLVQLNPALTGVGGFATLATVDGSLSFHLNPSLATLNGFKSLVNVGGSVTIADHPVLNGGSALSQITRIDGDLKVLRCALLSSLSMVSMLAYVGGGIELDANGAMTSVGGPARLRFVGGDIVLRRLSSLVSLAGLSAVEQVGGSVIIDQNIALPSIDGLYSLRRVEGSFEVTRCDVIWWLGAPQNLT # PASA_UPDATE: g8144.t1, single gene model update, valid-1, status:[pasa:asmbl_5124,status:12], valid-1 NODE_2850_length_4970_cov_39.819 . gene 114 1708 . + . ID=g8144;Name=g8144.t1 NODE_2850_length_4970_cov_39.819 . mRNA 114 1708 . + . ID=g8144.t1;Parent=g8144;Name=g8144.t1 NODE_2850_length_4970_cov_39.819 . exon 114 191 . + . ID=g8144.t1.exon1;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . CDS 114 191 . + 0 ID=cds.g8144.t1;Parent=g8144.t1;5_prime_partial=true NODE_2850_length_4970_cov_39.819 . exon 393 500 . + . ID=g8144.t1.exon2;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . CDS 393 500 . + 0 ID=cds.g8144.t1;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . exon 788 853 . + . ID=g8144.t1.exon3;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . CDS 788 853 . + 0 ID=cds.g8144.t1;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . exon 1162 1708 . + . ID=g8144.t1.exon4;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . CDS 1162 1404 . + 0 ID=cds.g8144.t1;Parent=g8144.t1 NODE_2850_length_4970_cov_39.819 . three_prime_UTR 1405 1708 . + . ID=g8144.t1.utr3p1;Parent=g8144.t1 #PROT g8144.t1 g8144 LIEKVSSGISHFDARIFHLPSEREAVENIWWRSMLDGQRNSVSMLGQTHFNAKKLLRYPTEKILAELRSIGHPWEAYPPQFKYGAFFKRESFDHSGVNPITGVVTPCVRNRLAAFSFAMSDISALPNGENALTQLLFARNWQDTGFDYEAIGTLIGRWSMTNGT* # PASA_UPDATE: g7074.t1, single gene model update, valid-1, status:[pasa:asmbl_689,status:12], valid-1 NODE_1185_length_13298_cov_41.0622 . gene 3919 11661 . + . ID=g7074;Name=g7074.t1 NODE_1185_length_13298_cov_41.0622 . mRNA 3919 11661 . + . ID=g7074.t1;Parent=g7074;Name=g7074.t1 NODE_1185_length_13298_cov_41.0622 . exon 3919 4423 . + . ID=g7074.t1.exon1;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . CDS 3919 4423 . + 0 ID=cds.g7074.t1;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . exon 4610 5745 . + . ID=g7074.t1.exon2;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . CDS 4610 5745 . + 2 ID=cds.g7074.t1;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . exon 5950 11661 . + . ID=g7074.t1.exon3;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . CDS 5950 11310 . + 0 ID=cds.g7074.t1;Parent=g7074.t1 NODE_1185_length_13298_cov_41.0622 . three_prime_UTR 11311 11661 . + . ID=g7074.t1.utr3p1;Parent=g7074.t1 #PROT g7074.t1 g7074 MAEAQRQLGCPRPARFARFDPAEPLSVQVATFVALVCMLIGSVELVGGVGTVALRPFYVPSECLRNASLVVLNKAGGKTIACVGPRACSATNATYDAGNPDDTGRTDADDWEDLNSVPTSLFGDDKLVMPADGDANTLYGITQGGLYISRDNGISYMSALLWNCTEAAATVKCPVVNPTYSAPRPSNKTLQCSADGATTLSIVNQTSGALFMTWDTQEASTNIKYFLECDSLPTLDSGTAQITTMAFAGPSPTFVSGQYATVSAIGLTPTLPPAGVRSNYLREDYFIWWNTTVGDSGPLSGATVVEVDISSNNITSATHVCAAVLRELNRTKIAVNPAQGVTADNVIKASCEGASGAQLIIEQLTGGAVPSAALDRGSVGGMGATTTMATGSGLPGSVTPKSVTIEPTGTSTAAKGKPSGGSAIVNGIPTGAISEENWFFYNDKLSMGHYFYNYKNGGCVDENAVNASSVSVHRIDITHVDKFGLDQAKASIANAIASVANSIDGLSATVTNATVAGKRTYNFYTIARSRIVDGAQFFFVDSKGTIWTWYFDKTGSRTAPKTTPSNPAAGTFTRIDISDANGRSSAPEVAVVVRDAINAVPGVPFVATIPGGEFKSNRILVEGTDAEAPSTRGKVTISVIDTETAQVSIGAVIPLTTLNDIIIRLCIERDGGVDNTTSVGTCKKVTTVAGATIEVEFKTGATAAQNALAIVTALSTASNYPSGVIPFLAERYIDTSNRVYVVVWQASSGAMQPPRSMYDITVDNPTNTPKGALMTLVSQDGSYAPTVCAEGSGGVCPASSIKVTRNDAYIQVRSITASTVPSVALDVGHGFVENDLIVFIDTNDSGGVTSSKLAQRGFRIPFAAQKGSEILSLAPTVTTTSAGTTGRAYKAAPASACVTDVTANANSDGTFTKTSHGLSTNDVIYFTGEASSATNFANGKVCLVTVISVSTFKCGGGLTTASETSIVYCKIASASSLAVATVSSVSVGANATITSASGHDFQVGDIVTFPFPKNAAGTALATNAALWRHKFFRVSSVPSATTFTLSPSVTTTATATGLIYQSVVDATYTRPFTAHGLKRVMDAHSTFSLHFDTYIHDSANYNVVRVVSKKSGQVPALYQHNIGFYTVANPIHMKYQFFDVTNNNRGIQFCVEQTIIGPGGQCEPSTNATRAVVEVYLRLRLTSMTSGANPTITMMSSLHGILIDDLVVFLGVNGTGGSAVNQRAFKASTVTGATLKLLPSVTPSAASSTGFVYVSTSARYVAVSASASATNSTITAQPDTTNSGVTADNDVIYFPGVQGTGTSFSAGVVCVIASFSANDVNANTWTCKNGRAASGTNSNLDYYLISTASSKHDITATSTGTTSPIITLSDSLDANVGDLVVVELNSVAVGAPSAQFRNKIFRIFAMPSPTSVILDPPLSSSPNASSVGALWIVGVKAVSTNAANDQLYTTVSTAALYPGGVTAFSVGKMSSGAVFLQQRAVGVPVGRPLITVQVDTADNTRSGGTLTIFLQDTSAVSVCFDKSTSCPATSGQRIRADISGVSSEQEVAYILYKSLLDAVIPGIGDVTVESGVIVSVSIYLLPGALPQRPDLSGGTPSTSLCGSWFISKFESSLASVIGYHSAGAYVPPLYGIASAVAAPTSITNTHPDAGNNAWDMDSGLSDLSISFLLANNKQIEQLAYGTVDGDAMLMTIATQLTFTNPVVTITGDVAAPTTVFPKQGPLSVMKFTPSGFALHKANLSMISKASIAQGQAFTFWSILGGTKKYAVRFFTNPDTSLRPPGVRHEVPIDVTDDPDVPTLNQRLIAGLDPIPGISASLGKQRVEITCDNGTVTPHGLRMRFFSSATNQQFVVWMNKGGAAPTLPDGALGVNVTLSDGDTASTVASKLAAVTSADAAFSVVFVVAVRRPYNTVRFIQRVGGVVLGQARIGLVADKADYSSSPSIGSNVLHLFSLSTDYQICIKQLPDDCPLANSATRATLNCTVIANCDTAAEVKSLLAATISAFGSQFSVLTVGATLYISVVSPGRSSPAHFSWSLGSWSIVNMVDSGQSPRAASGTEFEGGNSNKEGIIVGPAESVGVWRYKQVHEGTDTVRIAQDFIAITANDAVTGGSTPTSVLTISTLLAGGNGDRAVGDGNIGRDALRSPYESDGRKVTKMEGVLEGFSSDLAASTMYCRLWGAAANADSLTGYTTPCMIGGVVSGALRSVETAASPPIRMYPPTVVFSASGSAVVTWVVPEAHGTFSSATTQVVFTRCSGGPGTCDDVTTCSTACPTKTTTQGAVGINIFGLGNDDAYYAFRVRTKHSGSAYGALSSPTYARYEPCPNAVGAGFVGDL* # ORIGINAL: g7073.t1 original gene structure, not modified by PASA NODE_1185_length_13298_cov_41.0622 AUGUSTUS gene 165 934 . - . ID=g7073;Name=g7073.t1 NODE_1185_length_13298_cov_41.0622 AUGUSTUS mRNA 165 934 . - . ID=g7073.t1;Parent=g7073;Name=g7073.t1 NODE_1185_length_13298_cov_41.0622 AUGUSTUS exon 732 934 . - . ID=g7073.t1.exon1;Parent=g7073.t1 NODE_1185_length_13298_cov_41.0622 AUGUSTUS CDS 732 934 . - 0 ID=cds.g7073.t1;Parent=g7073.t1 NODE_1185_length_13298_cov_41.0622 AUGUSTUS exon 165 501 . - . ID=g7073.t1.exon2;Parent=g7073.t1 NODE_1185_length_13298_cov_41.0622 AUGUSTUS CDS 165 501 . - 1 ID=cds.g7073.t1;Parent=g7073.t1 #PROT g7073.t1 g7073 MVLDDPSLTDDHSQRPLETPFPVRFHPPVVDFGEITLCTPGVRSVSVSATASDTSVTIRGLFSENSNFDILNSENLSVSADSNATFDVVFVPRVRGRTEGTAFAVIDTVAVPLYLFATAVDCPFRISPIVKRIPVGESLSVPVTLFNPWKSILRVDEAIVSDPYELELVGDAARGEMGQW # ORIGINAL: g2740.t1 original gene structure, not modified by PASA NODE_4447_length_1604_cov_88.2838_potentialcontaminant AUGUSTUS gene 1 1559 . - . ID=g2740;Name=g2740.t1 NODE_4447_length_1604_cov_88.2838_potentialcontaminant AUGUSTUS mRNA 1 1559 . - . ID=g2740.t1;Parent=g2740;Name=g2740.t1 NODE_4447_length_1604_cov_88.2838_potentialcontaminant AUGUSTUS exon 1 1559 . - . ID=g2740.t1.exon1;Parent=g2740.t1 NODE_4447_length_1604_cov_88.2838_potentialcontaminant AUGUSTUS CDS 1 1559 . - 0 ID=cds.g2740.t1;Parent=g2740.t1 #PROT g2740.t1 g2740 MLHSDPYFPPLKPMSDGGGLLSPKSPNWNWIDSDIVERHYGCFSVGADGADAGALELTHVLSYLNATNPIVSASQISASVPPLLKTFMQPIEESSDTSRAFYDLASPWEFFRSCVEQDGDTIISFRCFVSRSMGTSTTMTRKIVDELMGGANAATSSEATEAPPSDVLIRVHLLARNRGTILDYCVMTRNKWTLLLMPSMGPHPLMASPRFLTSLIGSSVPTNLVCLGNLFTPLQGISAAGVCFEHVALASFLRIGLAYYEVNCGFALPDMYLNVDSDDQILPPIWKPLPLIPVGVSPDQDYRAWTNLQGYYEVWDEGRLAFGHHFGQFSPPKRTMGPMTEDEMAARLAGVATEYTGNILDFMSRVKSEYEAWFDPNVSVGPLDHVALEWRTVNGITATKSKEEATPARKASQGSKTAPSKQKADAKKSTTVDKPRSSVNSDGWPWDTAYRYLYNCSAVFVDQSYEDTSPSLRRPGLLFTRGQIRWKWDTRLNLDIEVFNNTANMLLVTFEIRKTNLVL # PASA_UPDATE: g1872.t1, single gene model update, valid-1, status:[pasa:asmbl_5229,status:12], valid-1 NODE_2914_length_4760_cov_34.8156 . gene 325 4536 . + . ID=g1872;Name=g1872.t1 NODE_2914_length_4760_cov_34.8156 . mRNA 325 4536 . + . ID=g1872.t1;Parent=g1872;Name=g1872.t1 NODE_2914_length_4760_cov_34.8156 . five_prime_UTR 325 325 . + . ID=g1872.t1.utr5p1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 325 498 . + . ID=g1872.t1.exon1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 326 498 . + 0 ID=cds.g1872.t1;Parent=g1872.t1;5_prime_partial=true NODE_2914_length_4760_cov_34.8156 . exon 691 814 . + . ID=g1872.t1.exon2;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 691 814 . + 1 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 1102 1221 . + . ID=g1872.t1.exon3;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 1102 1221 . + 0 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 1423 1622 . + . ID=g1872.t1.exon4;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 1423 1622 . + 0 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 1840 1927 . + . ID=g1872.t1.exon5;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 1840 1927 . + 1 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 2300 2443 . + . ID=g1872.t1.exon6;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 2300 2443 . + 0 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 2658 2748 . + . ID=g1872.t1.exon7;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 2658 2748 . + 0 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 3020 3150 . + . ID=g1872.t1.exon8;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 3020 3150 . + 2 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 3441 3501 . + . ID=g1872.t1.exon9;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 3441 3501 . + 0 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 3821 3997 . + . ID=g1872.t1.exon10;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 3821 3997 . + 2 ID=cds.g1872.t1;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . exon 4418 4536 . + . ID=g1872.t1.exon11;Parent=g1872.t1 NODE_2914_length_4760_cov_34.8156 . CDS 4418 4536 . + 2 ID=cds.g1872.t1;Parent=g1872.t1 #PROT g1872.t1 g1872 YMFYPLDLYNDSANHALRSLKKQFLYDEIEAEVNLCFDQLVFKLSDQIFAHYKGMASSILLDKQFKSELADQLGGPVRQSNFHFASNKYEGILRQRHLQILGRSIDLNVLLTQRLVTLLKRAVSVAIGRYESTDLTGILELETLLAHNRLCHELLSAHVTLDPFDDILAEANESVSMIGGRIALHTLEELAFDFLPNFNYNSVTQRFTRTILSFAPDVTRENPPRAAPHFWYGSKYLNNVFASIGELGSGFFGFPHTAALVRLLGYGGVAFMLEELVKNFKLTLVNTLRPYVDSLMEGLPQSVKLPAFHYGSVGALGFFQLSLKPIISYRELKTEVFQSFREVGNFVIFTKLLEHTMSHDECFTVMQYAPFQKAGTGSEHDNSDVARTIVKLKEQMMSVPDLSGVVKRGQGSGVEAALQAESLCRPVMRDKLLFNAVLGRVMSVLHEEAPNWRGHVPANGVMEVEECKEFHRYVT* # ORIGINAL: g6492.t1 original gene structure, not modified by PASA NODE_2844_length_4996_cov_34.6643 AUGUSTUS gene 188 4870 . + . ID=g6492;Name=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS mRNA 188 4870 . + . ID=g6492.t1;Parent=g6492;Name=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 188 282 . + . ID=g6492.t1.exon1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 188 282 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 537 744 . + . ID=g6492.t1.exon2;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 537 744 . + 1 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 973 1179 . + . ID=g6492.t1.exon3;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 973 1179 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 1456 2040 . + . ID=g6492.t1.exon4;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 1456 2040 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 2324 2408 . + . ID=g6492.t1.exon5;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 2324 2408 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 2647 2792 . + . ID=g6492.t1.exon6;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 2647 2792 . + 2 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 3015 3671 . + . ID=g6492.t1.exon7;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 3015 3671 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 4050 4178 . + . ID=g6492.t1.exon8;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 4050 4178 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 4352 4582 . + . ID=g6492.t1.exon9;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 4352 4582 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS exon 4730 4870 . + . ID=g6492.t1.exon10;Parent=g6492.t1 NODE_2844_length_4996_cov_34.6643 AUGUSTUS CDS 4730 4870 . + 0 ID=cds.g6492.t1;Parent=g6492.t1 #PROT g6492.t1 g6492 VRVSRSGLSSCVVVMNGSIVDVDTHKLSDGGRLVRFAGDSHVSYMQDEPGGIRVTVDGRTQVFSHERDPSKLLAPSSGKVVRFLKEEGEHVTANQPYVIIEVMKMHMPLVTEASGKLRYAVAAGAAINAGDVVARLDLDAHESVRPVRIFCDKFPTKFTATKPAKEKLNQTFESARITLAHVMAGYDVPEPWFTQRMNASVKDFVTCMKDSRLPLLELRELLTSLHARLPATLLDRIQRQLHQYATSLTSLFSTFPSSQIAAAIDEHASSLEPNEQPQFFSLVEPILAVLRRYRTGVRGHAKHALHSLLRQYVDVERMFSRGSKPYETVVYGLRETHKKNLGFVVDAMMSHASVAGKSSLVVLLMDHLCGSDGSLTVAEDKSLLNELASLENPEHSRVAVRARLALVQSHLPSFEKRVLDMEIYFESAVESISGDMCAQKLQSLVDQSTTIYDVLITFFFHRKPSIRAAALEVYIRRSYTAFTLESIRIDSIEDNPMIEWDFLLPSNHPHALMYTVMGMKKIFSVQDTPSPSELLVSKSSKELYESLVRTGRMIGFKTLAECRRLLPAVLERFPKAAGSSARDVENNEPLNIVSIALQGVEEGDADSEEELLRLFGGVVAGVKSMLFERDIRRITFILKSGASAVEFTRFYTFRERLGFEEDALYRHCEPGLAFQLELFRLSAYNIQVCPTGNLGQHLYYAENKTESQKASTDRRFFLRSIIRHPDGVPRETQQSVDYFFLEGERQVLEIMNELEILFANNQRYATTDCNHIFLSFQPIVQADPVTMESRLRTLIARHSKRLWRLRILDAELRLNIRVGEDIVTVRCV # ORIGINAL: g10692.t1 original gene structure, not modified by PASA NODE_4207_length_2028_cov_36.8525 AUGUSTUS gene 104 926 . - . ID=g10692;Name=g10692.t1 NODE_4207_length_2028_cov_36.8525 AUGUSTUS mRNA 104 926 . - . ID=g10692.t1;Parent=g10692;Name=g10692.t1 NODE_4207_length_2028_cov_36.8525 AUGUSTUS exon 747 926 . - . ID=g10692.t1.exon1;Parent=g10692.t1 NODE_4207_length_2028_cov_36.8525 AUGUSTUS CDS 747 926 . - 0 ID=cds.g10692.t1;Parent=g10692.t1 NODE_4207_length_2028_cov_36.8525 AUGUSTUS exon 104 283 . - . ID=g10692.t1.exon2;Parent=g10692.t1 NODE_4207_length_2028_cov_36.8525 AUGUSTUS CDS 104 283 . - 0 ID=cds.g10692.t1;Parent=g10692.t1 #PROT g10692.t1 g10692 MDFVQRIVGPNANSIPLKREELFAGIKTYYVDCPDAKSKLQTLDDIFGLASVGCVLIFCQTRETVSSLALQMMKTGHNVSELSGEELQAERDRIFDNFREGKTNVLIATNVLARGIGVFQ # PASA_UPDATE: g14390.t1, single gene model update, valid-1, status:[pasa:asmbl_10147,status:3], valid-1 NODE_964_length_15353_cov_42.7053 . gene 1926 4339 . + . ID=g14390;Name=g14390.t1 NODE_964_length_15353_cov_42.7053 . mRNA 1926 4339 . + . ID=g14390.t1;Parent=g14390;Name=g14390.t1 NODE_964_length_15353_cov_42.7053 . five_prime_UTR 1926 1977 . + . ID=g14390.t1.utr5p1;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . exon 1926 2185 . + . ID=g14390.t1.exon1;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . CDS 1978 2185 . + 0 ID=cds.g14390.t1;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . exon 3131 3291 . + . ID=g14390.t1.exon2;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . CDS 3131 3291 . + 2 ID=cds.g14390.t1;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . exon 3665 4339 . + . ID=g14390.t1.exon3;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . CDS 3665 4093 . + 0 ID=cds.g14390.t1;Parent=g14390.t1 NODE_964_length_15353_cov_42.7053 . three_prime_UTR 4094 4339 . + . ID=g14390.t1.utr3p1;Parent=g14390.t1 #PROT g14390.t1 g14390 MYSFRATTSLARGLTATSRAVASSASPSPSIDAAAKKSVAAAASVALGRDARGGNAPANANISAVSALYGKSHVRFMSSHQVDFPDFSAYRRSSPDESARKAFTYMIVGGGGLVAATTVKTMVTEFLSTMSASADVLALAKVEVDLTNIPEGRNVVLKWRGKPLFVRHRSAEEIAEVNAVPVAELRHPESDASRVKNPEWLVVLGICTHLGCVPISNAGDFGGYFCPCHGSHYDASGRIRQGPAPLNLEVPPYQFIENDTKVIVG* # PASA_UPDATE: g14392.t1, single gene model update, valid-1, status:[pasa:asmbl_10148,status:12], valid-1 NODE_964_length_15353_cov_42.7053 . gene 12405 13047 . + . ID=g14392;Name=g14392.t1 NODE_964_length_15353_cov_42.7053 . mRNA 12405 13047 . + . ID=g14392.t1;Parent=g14392;Name=g14392.t1 NODE_964_length_15353_cov_42.7053 . five_prime_UTR 12405 12586 . + . ID=g14392.t1.utr5p1;Parent=g14392.t1 NODE_964_length_15353_cov_42.7053 . exon 12405 12755 . + . ID=g14392.t1.exon1;Parent=g14392.t1 NODE_964_length_15353_cov_42.7053 . CDS 12587 12755 . + 0 ID=cds.g14392.t1;Parent=g14392.t1 NODE_964_length_15353_cov_42.7053 . exon 12866 13047 . + . ID=g14392.t1.exon2;Parent=g14392.t1 NODE_964_length_15353_cov_42.7053 . CDS 12866 13047 . + 2 ID=cds.g14392.t1;Parent=g14392.t1 #PROT g14392.t1 g14392 MNLFGKAKKQPALQTKDSIQKMRETLELLEKREKYLEKKIEGELDVAKKNAAKNKKVAMMALKRKKAYENQMDKISGARMTIETQVLAIENANVNLEAMKAMEIGSKAMKTIHSGM* # PASA_UPDATE: g14391.t1, single gene model update, valid-1, status:[pasa:asmbl_10149,status:3], valid-1 NODE_964_length_15353_cov_42.7053 . gene 4404 11505 . - . ID=g14391;Name=g14391.t1 NODE_964_length_15353_cov_42.7053 . mRNA 4404 11505 . - . ID=g14391.t1;Parent=g14391;Name=g14391.t1 NODE_964_length_15353_cov_42.7053 . five_prime_UTR 11349 11505 . - . ID=g14391.t1.utr5p1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 10590 11505 . - . ID=g14391.t1.exon1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 10590 11348 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 9532 10457 . - . ID=g14391.t1.exon2;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 9532 10457 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 9070 9307 . - . ID=g14391.t1.exon3;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 9070 9307 . - 1 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 8606 8890 . - . ID=g14391.t1.exon4;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 8606 8890 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 8289 8471 . - . ID=g14391.t1.exon5;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 8289 8471 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 7992 8150 . - . ID=g14391.t1.exon6;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 7992 8150 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 7670 7883 . - . ID=g14391.t1.exon7;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 7670 7883 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 7354 7470 . - . ID=g14391.t1.exon8;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 7354 7470 . - 2 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 6963 7120 . - . ID=g14391.t1.exon9;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 6963 7120 . - 2 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 6585 6676 . - . ID=g14391.t1.exon10;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 6585 6676 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 6350 6467 . - . ID=g14391.t1.exon11;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 6350 6467 . - 1 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 6071 6208 . - . ID=g14391.t1.exon12;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 6071 6208 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 5708 5792 . - . ID=g14391.t1.exon13;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 5708 5792 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 5167 5456 . - . ID=g14391.t1.exon14;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 5167 5456 . - 2 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 4908 4990 . - . ID=g14391.t1.exon15;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 4908 4990 . - 0 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . exon 4404 4643 . - . ID=g14391.t1.exon16;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . CDS 4541 4643 . - 1 ID=cds.g14391.t1;Parent=g14391.t1 NODE_964_length_15353_cov_42.7053 . three_prime_UTR 4404 4540 . - . ID=g14391.t1.utr3p1;Parent=g14391.t1 #PROT g14391.t1 g14391 MAKGLRWAKGGSSSSNPAQHRHRDAARRNFKAQLSGGGRPAGAGDGGNAGARGLTTTALKRHDGEEGMLPATLEAVGAGPGNLFAGITRHMNSGLESHREACAVLAAVQELIREQGLGESETAYFGALMNAAEQQASPAADGAAGEGDGERMSEEAGRRRALAAIGQLLALVLPRVPPATLRSHFLETSAVFARVLEGLGSAEDDESSGAAAKHFVGCVGVLLQSLQGAQWAHAAAMQACGLIIAAAGDERPKIRKRAQDELHALLVTPPPPMVQHPASAAVAQHIQASLGDGTSPAALHAANFAKRVLPMLPQSGVKAVCEGLLRLVASAQPVAYSVGMDAIGALFDAAVDPSAGAAGLTPALNAQLLSALAQFQPSIDDAQSLGAWLATVTRGLRSLAPRDEDLCMANVARFVAAVVPVLLAERSDVSSAAGTALLGMVRDALGACPNALVRHASQGLSGQGEASDNPLEAIVGSLEAGLKFRYQPAWASVFAAVAALFDALGPHVERVCSTLLSGLIALRLSRGFKLRPEVEAAIGAAARAVGPRVFLRLVPLDIDSEENQTQFPKGFLVPLLKDNIRRAELSFLSSQLLPLAGRWRDRAMALVSEGRELESRPYSLLYVQIWALVPGFMAHCTDCAESFKSVAKAFGVALSDRAELRQVVCRGLTVAIANARASAESTDGDAQSRARGAAAVAAIARFGQNFLHALFKAYLAEPKPHILDAVAAFVQIADPPLLNSFFKTAVKNLVDASVSDGLTPEARDRRHSMMDLTSTMINRLDAEGLSLVCRVLGPQLLDSDGVLQKKTYKALTIICRSEFPSVAAFALENIGSIGKTVVDALGALHGSAKKLRFRCLLAVVSRLGDGDLVLIAPVVGEAVLGVKESGEKARNAAFDLLIAMANRMRAAGDAGVAAFECDGAEVTPSLGEYFRMVVGSLQSSVPHTISASIVALSRLIYEFKNDVPADSRDELIRGVIAFLASPSREIVRSALGFAKVAIVILPQADLHRTVPSLMGALSSWTDEARNHFKHKARVIMERLGRKIGFDAVEASVPESHRKLLANIRKTKEREKKQKARVAAGEATEPEKKDKKTKTQTEYEQAFYGSESEDDDDDGVAEEDEPQQPRRKGKGAPAWIREDEEGDAPLDFLGAGVVSRVVSTKPRRAPADGARRRNPFAVGDDGRIVVSDLDGAPSGGAMEVDAQGSHVGAARQKRKRDDDRDDHSAPAKKHAGAPGSRDDRPTRDQPQQRGGHGAKKRDGDTKKSGKLEPYSYVPLQPTQLNKRNRSRASGRFAGIVKAAQAGTAKGLRAAKNAAKR* # ORIGINAL: g14394.t1 original gene structure, not modified by PASA NODE_964_length_15353_cov_42.7053 AUGUSTUS gene 14386 14774 . - . ID=g14394;Name=g14394.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS mRNA 14386 14774 . - . ID=g14394.t1;Parent=g14394;Name=g14394.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 14702 14774 . - . ID=g14394.t1.exon1;Parent=g14394.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 14702 14774 . - 0 ID=cds.g14394.t1;Parent=g14394.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 14386 14612 . - . ID=g14394.t1.exon2;Parent=g14394.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 14386 14612 . - 2 ID=cds.g14394.t1;Parent=g14394.t1 #PROT g14394.t1 g14394 MGAVTLTPSIRAEDERVRSYTLFAVVRHRGQGAAGGHYVCDVRHEADGWVHCDDSNVTRIASRSVLAEEGGSPYLLFYAQGQLGSREAAESAVPLSDPS* # ORIGINAL: g14389.t1 original gene structure, not modified by PASA NODE_964_length_15353_cov_42.7053 AUGUSTUS gene 78 1444 . - . ID=g14389;Name=g14389.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS mRNA 78 1444 . - . ID=g14389.t1;Parent=g14389;Name=g14389.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 560 1444 . - . ID=g14389.t1.exon1;Parent=g14389.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 560 1444 . - 0 ID=cds.g14389.t1;Parent=g14389.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 78 461 . - . ID=g14389.t1.exon2;Parent=g14389.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 78 461 . - 0 ID=cds.g14389.t1;Parent=g14389.t1 #PROT g14389.t1 g14389 MRAAIPSRSTGSGRGSGSGGSGGNRTRPRSDDAPKSGRDGRSAHAAHERKHVTDDTIRLSNDLESFGLFDARDAAQILSASTTTCRVRLPDARKRRGGGAPATPALSRVADRAKMRLLPPVPVSVLGAEGGDHAEDGQDGLVVAVFGSFPLSPSGLAVPATGNEALVPTVPTQTRRAWAKLPVPASTDVQLESAITPVRTLGLINAGNQCFAHAVLQSLVTSPLIFASLRDTLRRGEGGDGALHFGPVTAAVARFLAEYATAAYKDSGRLGAVRDRPLAPSYIFDVLHEQNFTTKGRQEDAEEFLSYLLDGLDSELVAGARHADGDNGCGADGQRAGSEPLPQPRHDKAPHSRADDDWEEVGRRNRTSTRRVAGFAAGAEGGFVALSAVDRLFGGRLRSVVQRRGSKASITVQPFRVLPLDIQ # ORIGINAL: g14393.t1 original gene structure, not modified by PASA NODE_964_length_15353_cov_42.7053 AUGUSTUS gene 13165 14345 . + . ID=g14393;Name=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS mRNA 13165 14345 . + . ID=g14393.t1;Parent=g14393;Name=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 13165 13227 . + . ID=g14393.t1.exon1;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 13165 13227 . + 0 ID=cds.g14393.t1;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 13421 13526 . + . ID=g14393.t1.exon2;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 13421 13526 . + 0 ID=cds.g14393.t1;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 13718 13821 . + . ID=g14393.t1.exon3;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 13718 13821 . + 2 ID=cds.g14393.t1;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 13974 14099 . + . ID=g14393.t1.exon4;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 13974 14099 . + 0 ID=cds.g14393.t1;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS exon 14256 14345 . + . ID=g14393.t1.exon5;Parent=g14393.t1 NODE_964_length_15353_cov_42.7053 AUGUSTUS CDS 14256 14345 . + 0 ID=cds.g14393.t1;Parent=g14393.t1 #PROT g14393.t1 g14393 MIARLGKEINHPDSVYYWAYKHNIPVFCPALTDGSLGDMIYFHGYRNPGLIVDIAEDIRLINNEAAFARKSGVIILGGGVVKHHICNANLMRNGADFAVFVNTGQEFDGSDGGARPDEAVSWGKIRLDAKPVKVYGDATMLFPLIVAETFAQAKHLRIRAEK* # ORIGINAL: g13898.t1 original gene structure, not modified by PASA NODE_3909_length_2528_cov_36.8577 AUGUSTUS gene 68 1231 . - . ID=g13898;Name=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS mRNA 68 1231 . - . ID=g13898.t1;Parent=g13898;Name=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS exon 1124 1231 . - . ID=g13898.t1.exon1;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS CDS 1124 1231 . - 0 ID=cds.g13898.t1;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS exon 788 879 . - . ID=g13898.t1.exon2;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS CDS 788 879 . - 0 ID=cds.g13898.t1;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS exon 351 522 . - . ID=g13898.t1.exon3;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS CDS 351 522 . - 1 ID=cds.g13898.t1;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS exon 68 190 . - . ID=g13898.t1.exon4;Parent=g13898.t1 NODE_3909_length_2528_cov_36.8577 AUGUSTUS CDS 68 190 . - 0 ID=cds.g13898.t1;Parent=g13898.t1 #PROT g13898.t1 g13898 MVRKKIDSRIRTLVENGVQSQHRSFFVIIGDKGKDQVVNLHYMLSKAVVKARPSVLWCYKKELGFSSHRQKRMREIKKKIQRGLLDPNKDDPFELFISATNIRYCYYSETQNILGNTYGMCVLQDFEALTPNLLARTVETVEGGGIVVLLLRTVKSLRQLYTMAM # PASA_UPDATE: g13899.t1, single gene model update, valid-1, status:[pasa:asmbl_6714,status:12], valid-1 NODE_3909_length_2528_cov_36.8577 . gene 1620 2075 . + . ID=g13899;Name=g13899.t1 NODE_3909_length_2528_cov_36.8577 . mRNA 1620 2075 . + . ID=g13899.t1;Parent=g13899;Name=g13899.t1 NODE_3909_length_2528_cov_36.8577 . five_prime_UTR 1620 1667 . + . ID=g13899.t1.utr5p1;Parent=g13899.t1 NODE_3909_length_2528_cov_36.8577 . exon 1620 2075 . + . ID=g13899.t1.exon1;Parent=g13899.t1 NODE_3909_length_2528_cov_36.8577 . CDS 1668 2075 . + 0 ID=cds.g13899.t1;Parent=g13899.t1 #PROT g13899.t1 g13899 MPARPAGGKSARKPPAAKRVTPSSSSSDSLFGRLIQLDRDLSRRLFCGEKAASGSNTHTRAFLKLLEYSAHGIPWISGAIGAYFVASPSDRHLALNLFAALILDLIVVGIVKMIFRRERPHYNADDMFFTVSVDA* # ORIGINAL: g760.t1 original gene structure, not modified by PASA NODE_2454_length_6203_cov_57.2386 AUGUSTUS gene 4708 6102 . - . ID=g760;Name=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS mRNA 4708 6102 . - . ID=g760.t1;Parent=g760;Name=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 5935 6102 . - . ID=g760.t1.exon1;Parent=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 5935 6102 . - 0 ID=cds.g760.t1;Parent=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 5449 5822 . - . ID=g760.t1.exon2;Parent=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 5449 5822 . - 0 ID=cds.g760.t1;Parent=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 4708 5077 . - . ID=g760.t1.exon3;Parent=g760.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 4708 5077 . - 1 ID=cds.g760.t1;Parent=g760.t1 #PROT g760.t1 g760 MCLVLEYAPHGSLKCFVEAIPANKRDSVDTLSLMVQLARGIAEGMAYLSSMNIVHRDLAARNVLLGQDAFGEYVPKVADFGLSRRLSKDIYTRKTRGKLPVKWLSIEALSRGIASSPGDVWSYGVVLYEMFSFGEVLYPGVANSELLDYLLQGNRMKRPVACPKAFYAVMLACWNKEPGNRPTFTELAAAVERAGHVLDRQLTDDDLSRAGTLAELPAVMAAPPSQPKMLTASDRQLSNYLELRVIEQPGKSVPQPYVEYGMLDIALDNPLYRTSTNARQNDYDNTADGYDNTADSAVTDQAA* # ORIGINAL: g759.t1 original gene structure, not modified by PASA NODE_2454_length_6203_cov_57.2386 AUGUSTUS gene 632 4572 . + . ID=g759;Name=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS mRNA 632 4572 . + . ID=g759.t1;Parent=g759;Name=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 632 3122 . + . ID=g759.t1.exon1;Parent=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 632 3122 . + 0 ID=cds.g759.t1;Parent=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 3681 4080 . + . ID=g759.t1.exon2;Parent=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 3681 4080 . + 2 ID=cds.g759.t1;Parent=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS exon 4359 4572 . + . ID=g759.t1.exon3;Parent=g759.t1 NODE_2454_length_6203_cov_57.2386 AUGUSTUS CDS 4359 4572 . + 1 ID=cds.g759.t1;Parent=g759.t1 #PROT g759.t1 g759 MMRLPCHPSDRTRVWWTAACVALQVIAVCLFADGFLNITDALAIRSVIAHPRTSVHYSTGTPEHASSQLPSADRPDATGTNYDRKGTAPPFDRLILVVIDALRSDFVFGSEGWMPHIQSRLVNGTALGFESVAVTPTVTLPRLKALVGGLAPSFVDALLNFNSPEFHGDNLVDAILSTGKKAVFYGDDTWLRLFPGRFVRHEGTSSFFVGDYTSVDDNVTRNVWPELERGDWGLAILHYLGLDHIGHGHGASRVLIEEKLREMDSIVERIVATVSEGDARTVVVVCGDHGMTTGGGHGGSSRDETHTAFVALSNRFSPSDAHRPDSLDILPHSSEPLLHESLDRASTPQPIAQPVKCRQTQIAATLSVLTGVGIPSQSHEFPVIDLLRQSVSLVELCDVVARRATELADRHGMLRSPYGALGDNAALPRTGADQQKSLDILFDDAQRFRSLLVHAVGDGGDAALAHAAYESHIRLADAVTARLDRVSESRGNNTEAGRMLAGLMASAIAAVGSIALLLHTHGCISRESNARASVVSTVVHPTGSIAKESNKSDIHAPFDCSSVGSPHTVDSGASDRFTCDAPSFGVACVSVVVVHAASIAASSFVEEEHNVWYFAASSLAFYRLILDVAAICASSRRRAINACTSGVDLSPVALVHRFTRISISLVSLVALRVLRAYSRNGVKWLTVPALADYLSAADSSEGLVFTVVSSLIICFFGIAASYRHATSSLLLQGSTFVRPSSSLTAKAWSFLSANVLAACFLAVFVIRTLDAVCESSVKLTYGDTLSPSWTLIAPVCADHVSVRQLALPMVQAIVFAVSLVSVLLSGRVAAVQPAHKLPFFAIIYTLSVALCAVARSPRVRFNTHSHRQCIPFASHTNTGDAHSLGDAPIGHVSLSWIFIVLVVGKCAHFAQGNSNTLSTLDVASAYIGASEYSQLRVGTLAFLCNFGNQLYWPLFALCVTASDGLAGIQNTASVFVASRSVSLLAVLGTVFSMRNHLFVWSVFAPRLLYECVETLSLLVVSVATIPVVAMHGVQ* # PASA_UPDATE: g8543.t1, single gene model update, valid-1, status:[pasa:asmbl_7775,status:3], valid-1 NODE_49_length_49778_cov_41.7614 . gene 34607 37059 . - . ID=g8543;Name=g8543.t1 NODE_49_length_49778_cov_41.7614 . mRNA 34607 37059 . - . ID=g8543.t1;Parent=g8543;Name=g8543.t1 NODE_49_length_49778_cov_41.7614 . five_prime_UTR 36956 37059 . - . ID=g8543.t1.utr5p1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . five_prime_UTR 36803 36826 . - . ID=g8543.t1.utr5p2;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 36956 37059 . - . ID=g8543.t1.exon1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 36734 36826 . - . ID=g8543.t1.exon2;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . CDS 36734 36802 . - 0 ID=cds.g8543.t1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 36400 36494 . - . ID=g8543.t1.exon3;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . CDS 36400 36494 . - 0 ID=cds.g8543.t1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 36076 36287 . - . ID=g8543.t1.exon4;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . CDS 36076 36287 . - 1 ID=cds.g8543.t1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 35574 35710 . - . ID=g8543.t1.exon5;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . CDS 35574 35710 . - 2 ID=cds.g8543.t1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . exon 34607 35242 . - . ID=g8543.t1.exon6;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . CDS 35060 35242 . - 0 ID=cds.g8543.t1;Parent=g8543.t1 NODE_49_length_49778_cov_41.7614 . three_prime_UTR 34607 35059 . - . ID=g8543.t1.utr3p1;Parent=g8543.t1 #PROT g8543.t1 g8543 MNPKCARCDKSVYPTEKLLLLDKAWHKGCFNCEVCKITLTLKTYVALDKKPYCKTHYPKIEHTAVADTPENLRIASNTKAQSTVAYKAEFEHAKGEYTAVADDPNTIRATQNTKMRANYDQRGAEESAPRGRVASNAAEEAAPAPRAVPQPVRAAPPPVAAPEPEPEPAQASGPRYVANYSYDKADPDEVSFVEGDVIINGEIIDEGWMRGTVERTGESGMLPSNYVALVE* # ORIGINAL: g8536.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 4876 11674 . + . ID=g8536;Name=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 4876 11674 . + . ID=g8536.t1;Parent=g8536;Name=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 4876 6706 . + . ID=g8536.t1.exon1;Parent=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 4876 6706 . + 0 ID=cds.g8536.t1;Parent=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 6905 8982 . + . ID=g8536.t1.exon2;Parent=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 6905 8982 . + 2 ID=cds.g8536.t1;Parent=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 9176 11674 . + . ID=g8536.t1.exon3;Parent=g8536.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 9176 11674 . + 0 ID=cds.g8536.t1;Parent=g8536.t1 #PROT g8536.t1 g8536 MDSDFGEYLEGDGDGLEAEIILDTDELGEYDDEYEGDNTAVGGDYGAVFRGSGNSVNVNDGDDEEFTDHRAVGGFSDSYGSGDQNDGDEDDYEDAAEDVADGEEGDVDSWPVLQKWLNSSAITPIVARYLEDGDSNVSRDLLAQYLIPGENQLDISALASALPHLYAHGFNLDEGGDPWGDGGSIRQSLGSRMSTTSQSHGYVVRGEGVGGADRAQRVMHGVQDGREDAPELHPGDSQEAQHDRTPFDDEYAHDSEEDYAVPVDDGNYGTFEPLSRSILSDAERSFEDDHRFDISHSPLAIATAGGAIALFTPSGPKFFSPTAAQLQLPVDNAPPFSPGAFFGARSAHMPGDASTPKIRVIADDEDFGVGVGSIGLQSHTPPGGYAHSPRSPSMSRSSFGIEDARERRARDAHSNADASTTSSPKLSRRVVFDVDSDDESHSVSSEQSASTSSSTAVPSAPDAANHAHSSSDADSGVPPGSHPHSSLSGRENDIDSATQSSVRDVHQVTSKDVHVSEKSHVVPSSSVLDFRHTYPAAPEPLSYAAYAMNRGTPANASSKRQSLWGSVAARGVSGSRSRAHLLMPAGLDVRLACPAGTKATRSIPIKNGGAAPVAAKLSISARDESAQGSSHTHSLVKHIAVAPNKFVLLPGRVFEARVTFSPPSDAAETSDGLTDVVFTVLVSVHPDGPVYRLPASASVSDEINSSTMQPSPARQSSRGESRVDGAPVTSSAAVCIGMDTPARVGARASPSPLLDRVVVEASQSQRSPIRAPTGVDIAIIGQSTMSPRSATSNGRSPRPPASEEKAAVSEVGVVTGVYGGWSVDDHADRVRVFLSAAAGATEVGSDGDTSSIETHKRVDVAGDEQSPRSHHPRPALHPSEQSPRPLSEQPRESTGGSTYTNTNTNAITNANVNANTSTGDSVLRHPPVDVYSWPGSTFATDGDSAGVHTTRDGYDLNSVGIPLGLNSQNFRHGEFPSGGDGLLSSSRAIRDDVHANAAGSSWTAPQGLPAGSGGFDDGTLRGVSFEGISIGAMGIGSRHDLSRYAAPASPGGSGGPAGQASRDARDSARPAAGEGKSGITLDAHSAYSMDRARAAGAAGTASPDAKRTTGRASGAHQRVPLTTSSAASPKSSRGELIRGNALAVDGGAPRDSPLKPAAAGIEDRSERKYIEPHPILAHGALSSRYGVHESPRTRGPALRCSRSCLNFGGVALRTATSAKIALKNASQYPVLVTWSIERVPAAQNKVCPFTASAGVRPTCEALLSNDADVAIDVEFLPTARNFHLAYLRVVAAGPADTESTVFRVPIIGYGGTSNVVLGNVSPSQSGYVVHAADGGSASKVRLPVHNAGDRAAFVVIADGPHTPRNMVVVSPRTFLLQPGVTRNVSVTVSGPRSRLATVDGHPQSSLVLLCGDELCRRLYASHVLQGWPLHEPFRAAPGVRLETLSFEGEHDSRTDLRDELASWSDVPLTADAGGLAISASEGGALYSRDWRHDDAIAAVTDAVHVTIKWEQSAAGGTRSGAPHTADVSKTNGLRHDAVGGEREPHSDGGDHFETALPRKPRVDSGRAHKRAVKVDVSAKEGRADGKSAHEHCTHASSLHLPSRQTSGIAVSPCKIVLDAESSDAAYIRVVNKWVACVHCAACNNLLTSPFPDIRHYLALSALFALKLTSLFYPSLLIIVCPMYRAPHNIDYEVVWPASRIQVSPSKGHISAHVQSVLSIRPVPVDVNHPPTQWRGSVMVLCTSATPGAKGRSFQVEVVIRGRSEHAFARGGDPSHGNLLVRPAPVLTPTQLRQIESLARKLRREKRSAASNAQQQSTSGMAAARAEDTGDEEMYHPDAHAPVVGKANPPRKHAPAPLEWEPRDRQPIATTVRMPAPVGRSSAESGVRLELAHQPVPGGLVVCHYDIDCTGLRGADGWTVRPVGAPFHRPPHAPIAGLRRAHPSVFTLRSVSGSIEPPCRIHIEVAFRPVDVGLHSQLFDVDATVSGKRNPVHVGRIELVGRCIEGEEPPPLPTTPKSLLHKTAMRALTPCITAQPRAIAFSQTMAGRTDSRDIALTNHSDATVTVDIPPPNAPFDCSHARVRLSPGASARISVSFGPSRPGWFTGNLHLAASDGSAVDVPLYGETDPIAAVGRAK* # PASA_UPDATE: g8545.t1, single gene model update, valid-1, status:[pasa:asmbl_7773,status:12],[pasa:asmbl_7776,status:12], valid-1 NODE_49_length_49778_cov_41.7614 . gene 41347 46794 . - . ID=g8545;Name=g8545.t1 NODE_49_length_49778_cov_41.7614 . mRNA 41347 46794 . - . ID=g8545.t1;Parent=g8545;Name=g8545.t1 NODE_49_length_49778_cov_41.7614 . five_prime_UTR 46608 46794 . - . ID=g8545.t1.utr5p1;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . five_prime_UTR 46247 46443 . - . ID=g8545.t1.utr5p2;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . exon 46608 46794 . - . ID=g8545.t1.exon1;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . exon 42112 46443 . - . ID=g8545.t1.exon2;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . CDS 42112 46246 . - 0 ID=cds.g8545.t1;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . exon 41720 41926 . - . ID=g8545.t1.exon3;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . CDS 41720 41926 . - 2 ID=cds.g8545.t1;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . exon 41347 41477 . - . ID=g8545.t1.exon4;Parent=g8545.t1 NODE_49_length_49778_cov_41.7614 . CDS 41347 41477 . - 2 ID=cds.g8545.t1;Parent=g8545.t1 #PROT g8545.t1 g8545 MKRSTNNMNVSGTDMPIMGPTDDVHQDLQQKSIVELASINKQLDALSSKKKRNQKEEQMFQFLIIRKIELVHVLSTFKRSTSETNINVPKPSAPHAKTSVESLEDAHHHDAHGAHASASSTPAAKAVPEIHVAVDDAEQRRRSHEAEARAKMTDEERRKVDEERQQREEEEKREAEKLKRRERLLKKEQDRLRQDEERRKKQEEDDAALAAAKAAAEQLQKEKEKEKPPAPATPAAGAAPVHNGDEKKKPPVPSHPPVGHVEKDKPPLPSTPARTSTPQVAAVAAAATPRERSPSTVAEQQARLDAERKQREEDAKQRAADEERVRMEALERMREERRKREEERRKKEEGDDAPAVDKEREERERKEKEDRERAERERKEKEERERKEKEDHERAERERKAKEERERVERERKEKEERERVERERKEKEERERVERERKEKDERERVERERKEKEERERLEHERAERERKEKEERERIERERKEKEEQERVERERKLKEELAHKEKAERERIEREYQEKERQRIERELKEKEERERFERERKEKEERERLERERLERERLERERKEKEEHERIERERKEKEERERKEKEEHERKEKEERERKEKEERERKEKEERERKEKEERERKEKEERERVERERKEKEERERKEKEERERVERERKEKEERERKEKEERERLERERKEKEEHERLERERKEKEEHERKVKEERERVERERKEKEERERVERERMEKEERERVERERKEKEERERVERERKEKEERERKEKEERERVERERKEKEERERKEKEERERVERERKEKEERERKEKEEHDRLERERKEKEEHERKEKAERERKEKEEHERKEKEERERKEKSERERKEKEAAAAATAASAAAAASATSAAAAVASSAASAPADTPEAQKREREEKRRKLKEEREALLRSMGMEPTAIPTPTVVEAVSAEEHERERKDRERFEREEKVKRLREEREKKEQEEKERREKEELEKDEAERIRKEKEKHDREEKVRKMREEREKREKEEKEKKEKEEKDRLEKEERERKEKEDKERLEREEKVKRLREEREKKEREEREKKEREEKEKEERERLERERAENERKSKEEKEKLEREEKVKRLREEREKREKEEKEKKEREETDRRERDERERKEKEERDRVERERKETEERQRVELERKEKEERERKEKEVRDRIERERLEKEERERVERERKEKEERERKEKEDRERVERELKEKEELERKEKEERDRVERERKETEERERIERERKEKEERERVERERIERERKEKEEHERIERERKEAAEAEEVARVERERKEKEERERKENEELEAREREEKAAAAAAAAQKEKEEGDKKAEEERVRAASVARPSEATAGRPSEGSNLRVSMLRSRLTQGETFTKHGRSGNPHKRFVFVEFEDASSPKGRIGWRDPKDKKSKPDFLTLQDVQKIALGHTTAVFTRTGKDKHKTKALSLVCKERTLDLEAETEEIRDAWAEALAGVLGVPSS* # ORIGINAL: g8539.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 21457 24201 . - . ID=g8539;Name=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 21457 24201 . - . ID=g8539.t1;Parent=g8539;Name=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 24101 24201 . - . ID=g8539.t1.exon1;Parent=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 24101 24201 . - 0 ID=cds.g8539.t1;Parent=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 21959 23900 . - . ID=g8539.t1.exon2;Parent=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 21959 23900 . - 1 ID=cds.g8539.t1;Parent=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 21457 21681 . - . ID=g8539.t1.exon3;Parent=g8539.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 21457 21681 . - 0 ID=cds.g8539.t1;Parent=g8539.t1 #PROT g8539.t1 g8539 MESNIFLAKRPASPPKTQYAFELLEKLQDRFNEKALEGGEGFLQAIHDVGPLLHNLEVELEGSKAELDDGNGKVEDLQMQVDKLSLFFDNEARKNIEKEKAMLALAISGLQSHIKNGKKSQTKMTQESEKLELELNRVRAALQDSDMQCRLLREKLDQELKEKDDIQQTFDLSWKELTEVESGLFESRDRFKDVKKNAARERTEMAETRRALEASLKATEAETEKLKEKNARKRIAKADLTEKVKDLSAKVADIEQKNSVVEKTRHKMEAQVGEIKDRLSASSLEVRQLKKVRNDLRAEYARIESDIKTKREEHEKRYEAMILKYEETVRKNVSLMTLGEELKQEIENWKSKLSDDESTGKKLEAEKIRLEKQLQIQIVECKRLAEKNARLKSEISSERKFHKAREQSLSQMIETLTKQMSQERFTRRSLEEQAAREQTRFSKTKTELNSQLSAAKADIETLTKEITTLNGKLHHMRATIADREQSIEKIKVEIQTLEETKETTKRELEGKIAIVHGDIQRFEGEITTLTARILVQDKSIGDLRSRVSFRREEVEGMHRVEKEITATNEVLTVKKEELTVTLEEAMNHQQFVAREIGSFRSVTAQKNADHRKDIETLTQELRNVNDRMKLTLERSQSSSTRAKVLREEEAPIRAAISDALEKRVDAESRLRDTRKMVIMEKRVREEVQNQLWLCEERNRKDLAAFVETRVENANQLASITRRLEGEIVGMDGFVQNTVLPSVTGPTNGVASGSPL* # ORIGINAL: g8538.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 17159 21007 . + . ID=g8538;Name=g8538.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 17159 21007 . + . ID=g8538.t1;Parent=g8538;Name=g8538.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 17159 21007 . + . ID=g8538.t1.exon1;Parent=g8538.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 17159 21007 . + 0 ID=cds.g8538.t1;Parent=g8538.t1 #PROT g8538.t1 g8538 MAVRCAFGFVFNRNLTACVDCASTVPPIPPGSICNGSDSVYPCDRGFFCPSTALSITCPKGSLCRSGVVQPQECFGGGAFTCTDRGQGSSANVIPAAILVAACAVALWVLIHVILKMFDRRREMQSQRKFDQTVASVKLMQRVYPYAMRWRRKTIAARTDREFAATNRSNTPQGQDHGVVGRPRSVSSAVAELAEAEWNSVYATEGPQAELKQINVEDGEEEEARPEVVSSQNAKSMSLFTASLSSSTRADHEQQDEQSRRGSNSSQVSLTVEAARRARQARLGGIDVLAPLPFGRTATDTAVDESQNSLSLSQISAQFSDGRRGSASSQSSLTVDAARRARSLADSNATNGLASSQASAKTQISVQSSAKSQLLDGAILTRRAADEPAVASSPTNDAASDANAASSDTAAVANAVAASQTSSQLGNPSPSRGSVSSLAVLPVESAMRERVVSATESTLLDQVPPLPRAQISGDQLSGSRSSRPSKSSLRSIFSRASERGRRFRITTDVDLPQIDITHASVRAKKALVRRANSQMWKAAEAFADIPKTRSFRHALRTALDRGERLDDIELQNVSVAASFASAAELRSVGIGKPVVQNVSCKMPGGKLIAIMGPSGCGKSTLLKALAAAGEGPQFVTGAVYVGGMRRPLSRPLPESSFMPQESVIYPDLTAEETVRYARLLTRGPFVTKAVEGGEDAPLYDATDELVYEVLDVLGLGGVRGRVVGAEDGAEGERSAVSGGQRRRIVLAMEIVKRPSMLLLDEPTSGLDSTSTLVVMKALRDLANNGTTVIAVIHQPGYRVFKMVDDLVLLTGQGTLAYSGRATGVLEYLESIGYTRPLHASIPEFALDVAIGISRRKNTKTADGPALAGRILSSKWRRHSGRRSIAGSTTSQSLNQSLQNSGNRAHLSELLLRRLAAGVNMGELVVVEPEDSNDGTVEVPYDDEAPQVVRVAWRQFWMVLCRTLVQLSRGRRSLLIDALLMILMSVVITLIYGDVGPFDHGSQHSALGLTLGLTGVIVGLRIFGNDQHVYEKERAAGVMSVPYYFGKLLGSIPMIFINPFMLSLSFCVIMSPRGPLSEYFSAFLLTQWAAVSVAVLCSILLRRKIALPVSVLVVLIAFLCNSITQKEKELVDKLGGFGTFLARISFLSYGTKAISLSEFTRYAPVYAARVSLALNAIGFDVDPTVPFVATGAYAPGGTAWQQLCGDLFAFGVVAFTLAGVSMWLHSKEALRMSVMVQVARVRRGQRPRLRTRPSFNAKLVRHLIQTDDDTSAVAVIQCRDSEV* # ORIGINAL: g8537.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 12288 15937 . - . ID=g8537;Name=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 12288 15937 . - . ID=g8537.t1;Parent=g8537;Name=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 15827 15937 . - . ID=g8537.t1.exon1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 15827 15937 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 15489 15647 . - . ID=g8537.t1.exon2;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 15489 15647 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 14890 15129 . - . ID=g8537.t1.exon3;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 14890 15129 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 14325 14594 . - . ID=g8537.t1.exon4;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 14325 14594 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 13894 14023 . - . ID=g8537.t1.exon5;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 13894 14023 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 13594 13649 . - . ID=g8537.t1.exon6;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 13594 13649 . - 2 ID=cds.g8537.t1;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 12288 13376 . - . ID=g8537.t1.exon7;Parent=g8537.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 12288 13376 . - 0 ID=cds.g8537.t1;Parent=g8537.t1 #PROT g8537.t1 g8537 MGDDALSVEGIFYSLDDAPMIDRHGFALEDVSAATHEARETERSNQNELRRRRHDDVMAETGASQRPIDRKDRRLIDLARGGLPSESRPRWWLKYSRARDRLKRNGGYYTMLLKRNSGMPSRAAREIELDLMRTFPTNVHFCNSAAPKIAKLRRLLVAYSWHNPRIGYCQGMSQIAAFLLLVVPEEEAFWLFVVVLEEYLPSDWYTPGLTGSHVDQLMLQRLIEKQLPRLHARIRHFAFDLPLISLHWFLTLYISVCTTETALRIWDVFVTEGRPALFRITLNMLQRHEDELLRLSSMESLYEGLKSLPGSIDDLGCDYLFQETDWELGRERDKPRRRSLAELLLPNILFRRFSGAGLPQPKLASVPDNGDEDASSSSLQVIDPAAVTDVHGEEGRDADEVHSDVNLGTSADTTRSGSLASISAVPDRKSPSSGTEAFAVAYTRALLREAKSTPDLVALADEVEPQVLRHVMSSPCLEAVIDSVGDLVRGPAGPGAQGYRRGSHDARGVGSPLSHSRLASASSSSASALGDDRAKSPLFRRSMSGDALSTLSSTARADRRAALAVERPISCPIDAFEGLTRALGDGDSCGVDSCDGDGQGVRGTAGDGVAVRGAGDPSAPAVSDSGVVAASEGWDDEERVRRMSLGSFAQFRQGLAVQKKRLSLYADERVRRLKQSAPPGEPAE* # ORIGINAL: g8540.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 24805 26365 . - . ID=g8540;Name=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 24805 26365 . - . ID=g8540.t1;Parent=g8540;Name=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 26320 26365 . - . ID=g8540.t1.exon1;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 26320 26365 . - 0 ID=cds.g8540.t1;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 25893 26190 . - . ID=g8540.t1.exon2;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 25893 26190 . - 2 ID=cds.g8540.t1;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 25379 25718 . - . ID=g8540.t1.exon3;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 25379 25718 . - 1 ID=cds.g8540.t1;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 24805 25221 . - . ID=g8540.t1.exon4;Parent=g8540.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 24805 25221 . - 0 ID=cds.g8540.t1;Parent=g8540.t1 #PROT g8540.t1 g8540 MSKRKVTFSEGVDNRPARRRRLGEEDEENVDVVPHSRADDEAAADRDNRDMDIGDDDSDDDSENDDEGPTENGEDEDEDEDGDGRCNVRRKYDIMASEDVEGAEETSGEFGGGYKITPFNLDEEMETGKFDKEGNYYESKGDGVRDAWADSVEFKEMYRPGESGHKPSERLPVTKEREPEPTVPPEEAARRMTAILRPGETVLAAIRRLGGGAHGSKNAKHKGAQQQRKAPKPGDDPVTEETKAKMLELTGYADTVLGAGFYEVYAADADGIRKHFSHRGGGAALSAPGVADNTPAFKTDKAVGALGDVEWEYKWSEDAEELYGPYTSEQMLGWQGEGYFKGDVVVRRVGTADFHKAARVDFDLYT* # PASA_UPDATE: g8542.t1, single gene model update, valid-1, status:[pasa:asmbl_7769,status:12], valid-1 NODE_49_length_49778_cov_41.7614 . gene 28563 34067 . + . ID=g8542;Name=g8542.t1 NODE_49_length_49778_cov_41.7614 . mRNA 28563 34067 . + . ID=g8542.t1;Parent=g8542;Name=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 28563 28646 . + . ID=g8542.t1.exon1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 28563 28646 . + 0 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 28804 29829 . + . ID=g8542.t1.exon2;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 28804 29829 . + 0 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 30016 31431 . + . ID=g8542.t1.exon3;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 30016 31431 . + 0 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 31622 31905 . + . ID=g8542.t1.exon4;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 31622 31905 . + 0 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 32107 32309 . + . ID=g8542.t1.exon5;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 32107 32309 . + 1 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 32484 32820 . + . ID=g8542.t1.exon6;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 32484 32820 . + 2 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 32936 33132 . + . ID=g8542.t1.exon7;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 32936 33132 . + 1 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . exon 33457 34067 . + . ID=g8542.t1.exon8;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . CDS 33457 33749 . + 2 ID=cds.g8542.t1;Parent=g8542.t1 NODE_49_length_49778_cov_41.7614 . three_prime_UTR 33750 34067 . + . ID=g8542.t1.utr3p1;Parent=g8542.t1 #PROT g8542.t1 g8542 MDQYHVLELIGEGSFGKVFKGRKKGTGLVVALKFIPKHGRTDEELVSLRREIDIMRGLTHENIIALLDSYETGDDIVVVTDFAEGELFQVLEDDLRIPEEEVRKIACQLVSALKYLHSNRIIHRDMKPQNVLIGKRGIVKLCDFGFARTMSVNTLVLTSIKGTPLYMSPELVREQPYDHTSDLWSLGCILYELFVGQPPFFTNSIFQLVNLIVKDPIKWPDDMSPLFTDFLKGLLNKDPTKRLTWPYIERHPFISGRDGDYDNGSGAAGVAASKSVKVSASSSKQNAAAVSVQQTQHVGGSEAQAQHHRQHQQSHSQRQSQSHAQKMAASDHPGGGHVAGDDAAAHERRQEERANGWAAIEGAVAADVESALKFRVDGEFARRFLRHIGQFWSDRPGPSAADVRRLTSIVRVAGALVGLPRASVHRELAGADDAFPRPAKLVSLLCDIARVCLDAEESCVQQSSAEGSEAISKLEAGVTRGLLCDVCVAMEACVRNVTEGGDDAIERAEVSLALQTSLLHHVPRLLTYLGDPLLRVQERALSLLCAYFPLATALSRGGGSASSVSDGGFVMAVDGSSALGAVVAAIDIRSVLPPTHAALHAQANSPKHGSGGAGYNTKQRVLLVSVLAIRALSALVTGGARSTSGGEADGAITLPRRVADAIFSVDEGHLDVVVGRAKHRDRTDALRLLLCLCKASVEVCRHVCARVEFVATLLAVPQSDADRETCDPSALGVLCVCAAIEHQREKAVGIVSLEKIDVARIVAAANKHADGLRSACLVLLSLLCKCGVQAAWDSIATDSTLALAAEMLAMGAPTLASMPAVDGLGLRFPWYGILDGAVETVKTLVSHPARGDEASERMAEDGTWERVVSQLQLCASGEPGVCGVLSLAGMSAALSFVNDCMQRNWRLLVPSMARKEGVVDAMVLLIAEQYLGAVLSWPESYGGGLLRVRLILGDVCSVLYMPFVANVGESSVMETQRTMHGARVLYHVIAAHEYVDGSDLVLPVGLISRLVLGHKLLAAQFVQAIQRLGAESFVTCLLGHPQGSVVNDVTSMLSALARASPEYYPFLDSLDALDGVASVLSIRSKAGSGISATKAKACNLIGNMCRHSAYFYGKLSESNIPDCVLACLADPDTSVRRFAAFAVGNMAAHGPEVVRCPPMATSIKSLCRLLRDPLEKTRSNAAVALRNIGRASPSLLPSIVECGAATLLLRTVVGDTSPDVCLSALLSLTSLCRYQQICDALSDPESLGCLEQVASEVDPEGEMASHLRKLFQRLRHNAQ* # PASA_UPDATE: g8546.t1, single gene model update, valid-1, status:[pasa:asmbl_7771,status:12], valid-1 NODE_49_length_49778_cov_41.7614 . gene 48198 49342 . + . ID=g8546;Name=g8546.t1 NODE_49_length_49778_cov_41.7614 . mRNA 48198 49342 . + . ID=g8546.t1;Parent=g8546;Name=g8546.t1 NODE_49_length_49778_cov_41.7614 . five_prime_UTR 48198 48511 . + . ID=g8546.t1.utr5p1;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . exon 48198 48931 . + . ID=g8546.t1.exon1;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . CDS 48512 48931 . + 0 ID=cds.g8546.t1;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . exon 49083 49178 . + . ID=g8546.t1.exon2;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . CDS 49083 49178 . + 0 ID=cds.g8546.t1;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . exon 49313 49342 . + . ID=g8546.t1.exon3;Parent=g8546.t1 NODE_49_length_49778_cov_41.7614 . CDS 49313 49342 . + 0 ID=cds.g8546.t1;Parent=g8546.t1 #PROT g8546.t1 g8546 MGQCKTKLMRQEAPPAGTDRTPTVERRISTKKSASEGDSEESKSLLTIPFFDELDKKNARLLGEFCERREMEADAVIAEEGKTNNYFNIIVSGKVKVSAKDEKGTVVELYTLGAGDWFGDWTLFGATILCATIVATEKTTLLSLSNEKFKEFVAKIPDARASVQTNSFGSPPESGAILALI* # PASA_UPDATE: g8544.t1, single gene model update, valid-1, status:[pasa:asmbl_7770,status:12], valid-1 NODE_49_length_49778_cov_41.7614 . gene 37991 40939 . + . ID=g8544;Name=g8544.t1 NODE_49_length_49778_cov_41.7614 . mRNA 37991 40939 . + . ID=g8544.t1;Parent=g8544;Name=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 37991 38149 . + . ID=g8544.t1.exon1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 37991 38149 . + 0 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 38276 38374 . + . ID=g8544.t1.exon2;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 38276 38374 . + 0 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 38524 38966 . + . ID=g8544.t1.exon3;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 38524 38966 . + 0 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 39197 39314 . + . ID=g8544.t1.exon4;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 39197 39314 . + 1 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 39417 39547 . + . ID=g8544.t1.exon5;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 39417 39547 . + 0 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 39860 40049 . + . ID=g8544.t1.exon6;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 39860 40049 . + 1 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 40214 40400 . + . ID=g8544.t1.exon7;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 40214 40400 . + 0 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . exon 40640 40939 . + . ID=g8544.t1.exon8;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . CDS 40640 40821 . + 2 ID=cds.g8544.t1;Parent=g8544.t1 NODE_49_length_49778_cov_41.7614 . three_prime_UTR 40822 40939 . + . ID=g8544.t1.utr3p1;Parent=g8544.t1 #PROT g8544.t1 g8544 MMVAAVEGAFRVVADRASTFGNTSLVLIAGLIILVSTYLLLRSIGSGGSGKGEKVPPMVPYTIPFIGSVVDFGQSPIDFLEAQYKKYGPVFSFKMFGQTCTYLVGSETAGLFFNSKNDDLNAEDVYAGLTVPVFGKGVAYDVPHSVFSEQKRMIKTGLNGVRLRAYVPLIEEETRAYFARWGDSGEKDLFHALSEVIIMTASRCLHGKEVRSMLDESVAELYKDLDGGFTPAAWFLPSWLPLPSFRRRDKAHIELKKVFSEVIRKRRQAGGFEEDQDMLRVFMEESYKDGRPLNDDEIAGMLIALLLAGQHTSSTTSSWIGLFLALKTDLQKECADEAFRVVGDLDAHVDFDQLAELEHLDRVLKETLRLRPPIMTMMRMVRTPQHVGGYTVPTGHQICISPTVNQRLEEVWTDRMEFRPSRFAEETDDLKNNKFAYVPFGAGRHKCIGEYFAYMQIKTIWATLFRMFEFELPDGKLPDIDYTTMIHVPKTSIVRYKRRTAH* # PASA_UPDATE: g8535.t1, single gene model update, valid-1, status:[pasa:asmbl_7772,status:12], valid-1 NODE_49_length_49778_cov_41.7614 . gene 561 4194 . + . ID=g8535;Name=g8535.t1 NODE_49_length_49778_cov_41.7614 . mRNA 561 4194 . + . ID=g8535.t1;Parent=g8535;Name=g8535.t1 NODE_49_length_49778_cov_41.7614 . exon 561 4194 . + . ID=g8535.t1.exon1;Parent=g8535.t1 NODE_49_length_49778_cov_41.7614 . CDS 561 3998 . + 0 ID=cds.g8535.t1;Parent=g8535.t1 NODE_49_length_49778_cov_41.7614 . three_prime_UTR 3999 4194 . + . ID=g8535.t1.utr3p1;Parent=g8535.t1 #PROT g8535.t1 g8535 MGVEKDPAEAFKWYMKAAEQGYSVSQCNIGLCYCNGAGVEKDAIEAFKWYMKAAEQGDRIAQYNIGWCYGDGAGVEKDPAESFKWYTKAAEQGNSDAQYKIGICYDDGAGVEKDPAESFKWYMKAAEQGNSNAQCNIGCCYEKGAGVEKDAVEAFKWYMKAAEQGNSDAHCNIGCCYSSGNGIEKDPVESFKWYMKAAEQGNSDAQFNIGCCYDDGTGIEKDAVESFKWYIKAAEQGNSDAQFKVGWFYYKGESVEKDPAEAFKWYMKAAEQGNSDAQFNIGCCYDDGTGVEKDPAEAFNWYMKAAEQGNSYAQCNIGCCYDYGTGVEKDAVEAFKWYMKAAEQGDSYAQCNIGCCYDNGTGVEKDPVESFKWYMKAAEQGNSYAQFKIDLCYGSGDGVEDPVESFNWFMKAAEQGNSYAQYNIGLCYANGARVEKNPAESFKWFMKAAEQGNSYAQFKVGRFYDKGEGVVNSPAELFKWYMKAAEQGHRSAQYNIGCCYEKGAGVEKDPAESFKWYMKAADQGDRAAVVNVARMHHEGRGVTQDDVNAIALLRSHKAEEAICRVFPYDEQYCERVKLQSCSGLFPTPYVESDGPAPRSFGIPRSLRELEMIRLSAAIREKAEWRRKMCDPHIVARWKEEALSQGATPAMFRYVLKELEYYASLVCGAIEPSSVDGTWRADNHVPAELRAKLLAGVEVLENVPDRLKDFHPGSHGQVVDLVHPSLHCYVEGLSRTTACDANPPLKWIGGGSVGGWSASGDKGDASSDWDTANANTSKIYQWLPMEIDVDERGRAAIRSYINNLHPYHHRELYGTIASIFECFVPLFSRVLTDMLQPCYLRLDYHCDLSEEQPDTISLSEDDEEGRGGMSGVTARDQGVGGAEADNSDGNHDNDDDGEDNGVGRVHQPGVPTFCAAYPPSRVVGLRGRRLQVIVKLANIVLTPDNPEYAGGVWNVEGMRNEHIVASGIYYYASDNISESCLHFRAAVNEPRNAWEYDGVGIGEMYGSSIRALNQELGSVVTKEGRCISFPNTLQHRVAPFRLIDGTRPGVRKILVFFLVDPTERILSTLNVPPQQREWLVDSVCAAGGEMRRLPLELVHSIVDHMEWPMSLKVAKKHREALMAERKYFVDEHTREVFERKLSLCEH* # ORIGINAL: g8541.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 26893 27959 . - . ID=g8541;Name=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 26893 27959 . - . ID=g8541.t1;Parent=g8541;Name=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 27693 27959 . - . ID=g8541.t1.exon1;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 27693 27959 . - 0 ID=cds.g8541.t1;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 27445 27560 . - . ID=g8541.t1.exon2;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 27445 27560 . - 0 ID=cds.g8541.t1;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 27278 27342 . - . ID=g8541.t1.exon3;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 27278 27342 . - 1 ID=cds.g8541.t1;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 27071 27157 . - . ID=g8541.t1.exon4;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 27071 27157 . - 2 ID=cds.g8541.t1;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 26893 26954 . - . ID=g8541.t1.exon5;Parent=g8541.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 26893 26954 . - 2 ID=cds.g8541.t1;Parent=g8541.t1 #PROT g8541.t1 g8541 MDQFETHDEFGEDEEEYEMSDASSEAESGSYNSDESGSSGSGKDDEYGGAEDGDGSDGSDKVQKAPRLKPNLALADAMEKILHQTVGNEIAILAKSKTAEKRLEKEKLDARERRKRLAEKRRVMELGRVYPDVLKIDKERKLVKVATRGVVKLFNAVAKQQKQTGTSGAKTSSATQSKAAVGALSKENFLNMLKAHED* # ORIGINAL: g8534.t1 original gene structure, not modified by PASA NODE_49_length_49778_cov_41.7614 AUGUSTUS gene 2 422 . + . ID=g8534;Name=g8534.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS mRNA 2 422 . + . ID=g8534.t1;Parent=g8534;Name=g8534.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS exon 2 422 . + . ID=g8534.t1.exon1;Parent=g8534.t1 NODE_49_length_49778_cov_41.7614 AUGUSTUS CDS 2 422 . + 1 ID=cds.g8534.t1;Parent=g8534.t1 #PROT g8534.t1 g8534 QGHRSAQYNIGCCYEKGAGVEKDPVESFKWHMKAAEQGYRSALYNIGCCYEKGAGVEKDPAESFKWYMKAAEQGYSRAQYKIGWFYNSGTGVEKDPVESFKWHMKAAEQGYSRAQFNIGCCYEKGAGVEKDLAESFNGT* # ORIGINAL: g14148.t1 original gene structure, not modified by PASA NODE_924_length_15840_cov_43.5439 AUGUSTUS gene 12956 13581 . - . ID=g14148;Name=g14148.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS mRNA 12956 13581 . - . ID=g14148.t1;Parent=g14148;Name=g14148.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 13308 13581 . - . ID=g14148.t1.exon1;Parent=g14148.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 13308 13581 . - 0 ID=cds.g14148.t1;Parent=g14148.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 12956 13221 . - . ID=g14148.t1.exon2;Parent=g14148.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 12956 13221 . - 2 ID=cds.g14148.t1;Parent=g14148.t1 #PROT g14148.t1 g14148 MLLVPSSASICERFEQLFAEYHKQRREHRLTASPFEKPPYLSFLTGARADNYGGTISARLQVVINHIAHFCDVYQISYELILIEWNPLVDKRCQANMLDMWAKNVGMRRARGEYLLNFIPDSLWNERIFEAFALKRLREDTMYLAYLLHSAYDTAELAQRGGPEPSSTGCNRPRSRAIV* # PASA_UPDATE: g14147.t1, single gene model update, valid-1, status:[pasa:asmbl_10010,status:3], valid-1 NODE_924_length_15840_cov_43.5439 . gene 10567 11882 . + . ID=g14147;Name=g14147.t1 NODE_924_length_15840_cov_43.5439 . mRNA 10567 11882 . + . ID=g14147.t1;Parent=g14147;Name=g14147.t1 NODE_924_length_15840_cov_43.5439 . five_prime_UTR 10567 10632 . + . ID=g14147.t1.utr5p1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . exon 10567 10684 . + . ID=g14147.t1.exon1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . CDS 10633 10684 . + 0 ID=cds.g14147.t1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . exon 10806 10918 . + . ID=g14147.t1.exon2;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . CDS 10806 10918 . + 2 ID=cds.g14147.t1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . exon 11246 11323 . + . ID=g14147.t1.exon3;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . CDS 11246 11323 . + 0 ID=cds.g14147.t1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . exon 11598 11882 . + . ID=g14147.t1.exon4;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . CDS 11598 11696 . + 0 ID=cds.g14147.t1;Parent=g14147.t1 NODE_924_length_15840_cov_43.5439 . three_prime_UTR 11697 11882 . + . ID=g14147.t1.utr3p1;Parent=g14147.t1 #PROT g14147.t1 g14147 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSYQGRCVTCGGPGISDAYYCKECTIQEKDRDGCPKIVNLGTSKTDLFYERKKYSVKTQGKG* # PASA_UPDATE: g14144.t1, single gene model update, valid-1, status:[pasa:asmbl_10011,status:12], valid-1 NODE_924_length_15840_cov_43.5439 . gene 1383 2776 . - . ID=g14144;Name=g14144.t1 NODE_924_length_15840_cov_43.5439 . mRNA 1383 2776 . - . ID=g14144.t1;Parent=g14144;Name=g14144.t1 NODE_924_length_15840_cov_43.5439 . exon 2512 2776 . - . ID=g14144.t1.exon1;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . CDS 2512 2776 . - 0 ID=cds.g14144.t1;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . exon 2289 2309 . - . ID=g14144.t1.exon2;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . CDS 2289 2309 . - 2 ID=cds.g14144.t1;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . exon 1383 2068 . - . ID=g14144.t1.exon3;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . CDS 1620 2068 . - 2 ID=cds.g14144.t1;Parent=g14144.t1 NODE_924_length_15840_cov_43.5439 . three_prime_UTR 1383 1619 . - . ID=g14144.t1.utr3p1;Parent=g14144.t1 #PROT g14144.t1 g14144 MSTHASREEDPAPLDVGDGPQTWTEADVVDYAKRVFQRDGLREPHTHAQMLSGRGIVGKYVIRLTDDAVRGIFAGKEGYAMSLIDGIRELTSRFGGAQSLAASIATVTPTNSGRAFQNALSGHFLSESGEVKFHEASDERSTLKLTINCHDACAWVEEGQKEGSQVILIKNVLTGGYLGYDPNGDYTYAKGQHFGAEEWIVSTKSGVLGAVVLFANYAQKYLAVVNGKLTGVSSQCPECVWNIV* # ORIGINAL: g14145.t1 original gene structure, not modified by PASA NODE_924_length_15840_cov_43.5439 AUGUSTUS gene 3151 6209 . - . ID=g14145;Name=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS mRNA 3151 6209 . - . ID=g14145.t1;Parent=g14145;Name=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 6150 6209 . - . ID=g14145.t1.exon1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 6150 6209 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 5509 5823 . - . ID=g14145.t1.exon2;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 5509 5823 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 5057 5194 . - . ID=g14145.t1.exon3;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 5057 5194 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 4581 4704 . - . ID=g14145.t1.exon4;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 4581 4704 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 4234 4382 . - . ID=g14145.t1.exon5;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 4234 4382 . - 2 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 3886 3993 . - . ID=g14145.t1.exon6;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 3886 3993 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 3151 3534 . - . ID=g14145.t1.exon7;Parent=g14145.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 3151 3534 . - 0 ID=cds.g14145.t1;Parent=g14145.t1 #PROT g14145.t1 g14145 MYRIGRGLSPLLRGGLRIPQRHALLASPITGDRRYSTVSNDNSTHNTLNYDGVTLDSLETATKASASTLPHHVVSADGDGFIILTAIQKIFEIGHDYGHLPWWLDIAVVAVAVRTALMLPVAVYQARMYARMENLRPMLTEYMEALKHSVATKCRRENKSYEEFAKTLNGEFKAKRKEVFQLHNCHPYRAILAPLVQIPIWISLSLALRRMAGTPVLGYGSAGDHVPGFDTGGCLWFHDLTAADSTMILPGLLCLTQLVSVELNTLKVVEQDAKNRILTNVFRGLAVMMVPIASQVPAGMVFYWTVSGLYGLGQNFAMRQPAVRRAFNVAETPSERVTLWRALQNKWEAERNETSADTGPPDLSAFAKKPEVRPLNATEKLLAKQLAMDASRRMGRRIDATPTKAVGGASPTASNPPTRPPSPAS* # ORIGINAL: g14143.t1 original gene structure, not modified by PASA NODE_924_length_15840_cov_43.5439 AUGUSTUS gene 1 291 . - . ID=g14143;Name=g14143.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS mRNA 1 291 . - . ID=g14143.t1;Parent=g14143;Name=g14143.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 1 291 . - . ID=g14143.t1.exon1;Parent=g14143.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 1 291 . - 0 ID=cds.g14143.t1;Parent=g14143.t1 #PROT g14143.t1 g14143 MTSITCTLGSDANTFNLIIVFSTVDGGAAFGAGVVVMPDDAIEGTLFLSVSRGGSDIVNTAALTRRPEDKAATTPRALLAVDLCRLNSTGGVVPVYP # ORIGINAL: g14149.t1 original gene structure, not modified by PASA NODE_924_length_15840_cov_43.5439 AUGUSTUS gene 14597 15273 . + . ID=g14149;Name=g14149.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS mRNA 14597 15273 . + . ID=g14149.t1;Parent=g14149;Name=g14149.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 14597 14677 . + . ID=g14149.t1.exon1;Parent=g14149.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 14597 14677 . + 0 ID=cds.g14149.t1;Parent=g14149.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 14806 15273 . + . ID=g14149.t1.exon2;Parent=g14149.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 14806 15273 . + 0 ID=cds.g14149.t1;Parent=g14149.t1 #PROT g14149.t1 g14149 MARFDPEESFLDDVPDGGIDDENVLDVALSMNTGPRYGRMLNFRWGVGNKLLLFSSPSPVAVKESKGNAAVYDTTGESTLAYEVDWEPALQPEYRKLLLQSHGTFAMLQDDARQSGGLSQGQLLQYSRLYRSVMRESVRRMQKAFDVDGGDEDAAGLIELAKIKEGVWHMCEIFFINHAPNAL # ORIGINAL: g14146.t1 original gene structure, not modified by PASA NODE_924_length_15840_cov_43.5439 AUGUSTUS gene 6856 10149 . - . ID=g14146;Name=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS mRNA 6856 10149 . - . ID=g14146.t1;Parent=g14146;Name=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 10003 10149 . - . ID=g14146.t1.exon1;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 10003 10149 . - 0 ID=cds.g14146.t1;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 9592 9799 . - . ID=g14146.t1.exon2;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 9592 9799 . - 0 ID=cds.g14146.t1;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 8755 9363 . - . ID=g14146.t1.exon3;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 8755 9363 . - 2 ID=cds.g14146.t1;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 8104 8354 . - . ID=g14146.t1.exon4;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 8104 8354 . - 2 ID=cds.g14146.t1;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS exon 6856 7731 . - . ID=g14146.t1.exon5;Parent=g14146.t1 NODE_924_length_15840_cov_43.5439 AUGUSTUS CDS 6856 7731 . - 0 ID=cds.g14146.t1;Parent=g14146.t1 #PROT g14146.t1 g14146 MASQGAGDAPPAGVMDLDSPMTTGSAADDALFEAAQQGSAADCRAVIMRGANPNATGRYGLTVLHWAILDSRLEVVRFLVDECRVDLSRKGGSPPSTPLHYATKGGHSVIADFLLSRGASPGDQDGQGFNALHIAAQKGFLLQCANLISNYNADVNATDPEHRTALMWAVHNNRSEDLVRLLLLKGALLDIPDVFNCTPLHWAARVGNTGAWRLLVDAGARVDVKDAGGLTPLERAQANEKTGDEMLGFYAVHERERLMNLQLPISRKEAWLRYGTWFLVPAMLWILSDLSRPLYTLALASLLGGASYLVCRRVWIKLVMKGNNAAFSSMLQVTYLLGHLLCWGRVLAGSGVGTAFSVFFVFYSALTLWVWVKIMTMNPGTITASKVTAEQERANIRNLIEVGRDIEAPDRQFCPSCRMRRPLRSKHCSKCDVCVAKFDHHCPWVNGCVGWKNLRMFVAFLFTICTNGSGLIYLTLSYCRNGAIAAGIAVDELPWYERVVAYYAFDGFAFLHTVWIACLIPFGLYLLQMQFAQLGAEITTNELHNWRKYTYLTRPASPEEMLQGGGCNDAKCTADHGPAGGASGKGKGGDPDAWLRDIAQSEARSGGGGMGMAMNSVAGTAVAPGDIARTALASSVAGGASGAAELAHVKLHNPFSEGPRRNLAGFFGCGRSIGWTVHWDSFYEGTGNGKHGDFHV* # ORIGINAL: g11409.t1 original gene structure, not modified by PASA NODE_220_length_30916_cov_38.5585 AUGUSTUS gene 28032 30916 . + . ID=g11409;Name=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS mRNA 28032 30916 . + . ID=g11409.t1;Parent=g11409;Name=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 28032 28268 . + . ID=g11409.t1.exon1;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 28032 28268 . + 0 ID=cds.g11409.t1;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 28494 28722 . + . ID=g11409.t1.exon2;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 28494 28722 . + 0 ID=cds.g11409.t1;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 28919 29506 . + . ID=g11409.t1.exon3;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 28919 29506 . + 2 ID=cds.g11409.t1;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 29787 30916 . + . ID=g11409.t1.exon4;Parent=g11409.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 29787 30916 . + 2 ID=cds.g11409.t1;Parent=g11409.t1 #PROT g11409.t1 g11409 MERSDGVVELEDDESVFLRTGDAITLEFALNTGAQSEVGANILRHEVSSIAPANAETKGFLCAESFGDGSIMYERTTEQHAPLSFFDCVFELYGVTSLRALQRTADHGTSGRKTILYGHAVQMRHMSSGKLVACMETPFPSEHLGLQLGLVEAAESVGHSSWFRVQPGSKQRSDGEKVRIGDDFYLVSVSSERHVHAHEASTAVLASFNKTLWRVNLFYTLRKDFDAYVKGGDVVRLVQKHTDDYVASISGRESGFASGLAALENSVGAPHVTDDVDGDFEHVDAISTATDEMSPEWYRGMNAKTSGAKVVLQSQRRTEASSFWRIELVGTRWGGRFLAWNEPFRLLSITTGYYLCIDERGGFGLTEFNSGSHTLFCFRLLAGHAGASDGHGATAVVGSGMGSPCISFGDAYVFIQHAVRNGIWMHVQEGRAGGAQSVADVGEGSDHNPFGYADQADRMSGGANAPGGYTDALCRLLMGRRHAHMDDAFAVTRVVESDTSDAVIMRTCADRFGAFASSLKSSDVFDDAALAKTEALVNSVCAQFVADELSNTEQIAMVRRRQGLFRRQGLLALVADILDAPHALRLSLNKREEESDMSPAATDTPFRRAVRAFYRLLAAALKGNDESCLFYAETGRLDRLFERAGYQLDVIEVIGVLVTHPGIVQRIRDYHVACLVELLRKHGRSHRVIDLLSALCVCRGQAVRKNQEHVMDELIGRHPDLLLRTQLV # ORIGINAL: g11407.t1 original gene structure, not modified by PASA NODE_220_length_30916_cov_38.5585 AUGUSTUS gene 20792 24351 . + . ID=g11407;Name=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS mRNA 20792 24351 . + . ID=g11407.t1;Parent=g11407;Name=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 20792 20828 . + . ID=g11407.t1.exon1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 20792 20828 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 20981 21042 . + . ID=g11407.t1.exon2;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 20981 21042 . + 2 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 21351 21422 . + . ID=g11407.t1.exon3;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 21351 21422 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 21912 21983 . + . ID=g11407.t1.exon4;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 21912 21983 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 22504 22641 . + . ID=g11407.t1.exon5;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 22504 22641 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 22854 22967 . + . ID=g11407.t1.exon6;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 22854 22967 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 23128 24351 . + . ID=g11407.t1.exon7;Parent=g11407.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 23128 24351 . + 0 ID=cds.g11407.t1;Parent=g11407.t1 #PROT g11407.t1 g11407 MLKGKRSDSLKKDDGQHPHLDFELEEGVSYLVKYLGATPITDKLSVESLRAKLDVMKSKESKPCQLSISIRGLKVCDEKMKHVHFDHAVRSITIVTTQAEHFLAYVARDSSSSNSFSAHCFKSKKYPVDTIAADIARSFTLAAQYEQNPKDRVDPKIASMRRVSTVGSPRLTRQDFEPVAPTLPSPTCVSARPASTADTYYEQIHKSASDDQVYDVVDRKKSNPTPARPGHPPMAQGDYDRPSFPDYDKPVGHNLNYAEVAFPGTAALATMPGVGSIALRRLSAASTMRPHLPFRDGDREREAIKKSSSVDALESRVPQSPKSPRTHEVQPVAFTNTFADDYDSLPPQRSMSTDAQEVDEVYGTVIIRRSIEDLTRDSYDSLGSVPQSPSLPLRASIQEDESDAPSTYDALPPPQTPPTTSTSASAAAAAAAAIAATATQMLSPPALPSRLRRPTLDATSLKEHPPSIAVASGGVDHLQQPHVGRQDAAPASVAPSTGNLPAPSVFRASKPRLSVGSWDAPRLTIARANALKGEVCGTCRDHFTWVTCKQCSSEFPASAAFVYCGYCGVKLE* # PASA_UPDATE: g11402.t1, single gene model update, valid-1, status:[pasa:asmbl_3771,status:3], valid-1 # PASA_UPDATE: g11402.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_3770,status:12], valid-1 NODE_220_length_30916_cov_38.5585 . gene 2232 6117 . - . ID=g11402;Name=g11402.t1 NODE_220_length_30916_cov_38.5585 . mRNA 2232 6117 . - . ID=g11402.t1;Parent=g11402;Name=g11402.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 5865 6117 . - . ID=g11402.t1.utr5p1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 5803 6117 . - . ID=g11402.t1.exon1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 5803 5864 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 4863 5510 . - . ID=g11402.t1.exon2;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 4863 5510 . - 1 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 4668 4734 . - . ID=g11402.t1.exon3;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 4668 4734 . - 1 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 4276 4379 . - . ID=g11402.t1.exon4;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 4276 4379 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 3993 4092 . - . ID=g11402.t1.exon5;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 3993 4092 . - 1 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 3471 3547 . - . ID=g11402.t1.exon6;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 3471 3547 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 3214 3313 . - . ID=g11402.t1.exon7;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 3214 3313 . - 1 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 2934 3005 . - . ID=g11402.t1.exon8;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 2934 3005 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 2578 2646 . - . ID=g11402.t1.exon9;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 2578 2646 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . exon 2232 2468 . - . ID=g11402.t1.exon10;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . CDS 2274 2468 . - 0 ID=cds.g11402.t1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 2232 2273 . - . ID=g11402.t1.utr3p1;Parent=g11402.t1 NODE_220_length_30916_cov_38.5585 . mRNA 2232 5748 . - . ID=g11402.t1.1.5b6be70b;Parent=g11402;Name=g11402.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 5129 5748 . - . ID=g11402.t1.1.5b6be70b.utr5p1;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 4863 5748 . - . ID=g11402.t1.1.5b6be70b.exon1;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 4863 5128 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 4668 4734 . - . ID=g11402.t1.1.5b6be70b.exon2;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 4668 4734 . - 1 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 4276 4379 . - . ID=g11402.t1.1.5b6be70b.exon3;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 4276 4379 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 3993 4092 . - . ID=g11402.t1.1.5b6be70b.exon4;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 3993 4092 . - 1 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 3471 3547 . - . ID=g11402.t1.1.5b6be70b.exon5;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 3471 3547 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 3214 3313 . - . ID=g11402.t1.1.5b6be70b.exon6;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 3214 3313 . - 1 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 2934 3005 . - . ID=g11402.t1.1.5b6be70b.exon7;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 2934 3005 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 2578 2646 . - . ID=g11402.t1.1.5b6be70b.exon8;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 2578 2646 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . exon 2232 2468 . - . ID=g11402.t1.1.5b6be70b.exon9;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . CDS 2274 2468 . - 0 ID=cds.g11402.t1.1.5b6be70b;Parent=g11402.t1.1.5b6be70b NODE_220_length_30916_cov_38.5585 . three_prime_UTR 2232 2273 . - . ID=g11402.t1.1.5b6be70b.utr3p1;Parent=g11402.t1.1.5b6be70b #PROT g11402.t1 g11402 MSATGGDGSNVARPLFHVPAPDEVAASAPKQRSNFFVLGRLGKPPSAPSPTGAASAAVYAHSVASIAPAPAHAGVEQRVEKEPAPPSTRPIPQSAPYAQPQPQAGPVPRVSQNPYKRAVSAPVASTATPATGVRDTARSQLTDVGAGAMPTLTYSPVARAAGSAPHVGGSGGGGSSDPVGTENGGFVVDDDFGSRKGRKEASSGTFAGDFAFLKQSSLYVEPPPPAPRPADAETVTGPLNDNAATKTFSSNSIIVNNRQRGNPVLKAIRNVPWEYGDIIPDFLLGGTTCALYLSLRYHNLHPEYVHQRIRELGRQYRLRVLLVQVDVKDSQFALKELSRLSVLTGQTMILSWSLEESGRYLETYKAYEKKPADMLQERVDTDYLSKMTDCLTSIKSINKTDVVTLLTGFGSLKNIIDASADDLSLCPGFGDQKIRRLQDTLNEPFFNRKRPRLQGGQGGAASQEAEVERALQETGGLASESAPARAENTESMETDVP* #PROT g11402.t1.1.5b6be70b g11402 MPTLTYSPVARAAGSAPHVGGSGGGGSSDPVGTENGGFVVDDDFGSRKGRKEASSGTFAGDFAFLKQSSLYVEPPPPAPRPADAETVTGPLNDNAATKTFSSNSIIVNNRQRGNPVLKAIRNVPWEYGDIIPDFLLGGTTCALYLSLRYHNLHPEYVHQRIRELGRQYRLRVLLVQVDVKDSQFALKELSRLSVLTGQTMILSWSLEESGRYLETYKAYEKKPADMLQERVDTDYLSKMTDCLTSIKSINKTDVVTLLTGFGSLKNIIDASADDLSLCPGFGDQKIRRLQDTLNEPFFNRKRPRLQGGQGGAASQEAEVERALQETGGLASESAPARAENTESMETDVP* # PASA_UPDATE: g11401.t1, single gene model update, valid-1, status:[pasa:asmbl_3768,status:12], valid-1 NODE_220_length_30916_cov_38.5585 . gene 106 2220 . + . ID=g11401;Name=g11401.t1 NODE_220_length_30916_cov_38.5585 . mRNA 106 2220 . + . ID=g11401.t1;Parent=g11401;Name=g11401.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 106 106 . + . ID=g11401.t1.utr5p1;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . exon 106 238 . + . ID=g11401.t1.exon1;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . CDS 107 238 . + 0 ID=cds.g11401.t1;Parent=g11401.t1;5_prime_partial=true NODE_220_length_30916_cov_38.5585 . exon 557 643 . + . ID=g11401.t1.exon2;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . CDS 557 643 . + 0 ID=cds.g11401.t1;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . exon 842 2220 . + . ID=g11401.t1.exon3;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . CDS 842 1525 . + 0 ID=cds.g11401.t1;Parent=g11401.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 1526 2220 . + . ID=g11401.t1.utr3p1;Parent=g11401.t1 #PROT g11401.t1 g11401 DFTPASASVFIVRVTRANGNRSMALQAEAALAGVLAPDLAVLDGESLFVGSNTVRGIHHFDAVEGSLKFNRLLSLGQSSRPKGLAVWKCGLSRLLVAIACDKKESGRPALVSIRTLDDFDAQIIAIADISGAVAGGRTGDSADKTRAPMQTGAFSGANSAYSARSTEGRVALGNDGEDSEGGEEIPASLLAGRLLLPSSGGGGGNEGHSWNRLVFEVKSDSPEDDDIANSPVRGVGALKNEGGDGGRITAMSGDDRLLRALELFSARMDAQFVRVFGVLDIHSQRLSAIENALGINNSTD* # PASA_UPDATE: g11403.t1, single gene model update, valid-1, status:[pasa:asmbl_3769,status:12], valid-1 NODE_220_length_30916_cov_38.5585 . gene 6589 10168 . + . ID=g11403;Name=g11403.t1 NODE_220_length_30916_cov_38.5585 . mRNA 6589 10168 . + . ID=g11403.t1;Parent=g11403;Name=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 6589 7387 . + . ID=g11403.t1.exon1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 6589 7387 . + 0 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 7592 7733 . + . ID=g11403.t1.exon2;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 7592 7733 . + 2 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 7952 8066 . + . ID=g11403.t1.exon3;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 7952 8066 . + 1 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 8352 8481 . + . ID=g11403.t1.exon4;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 8352 8481 . + 0 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 8758 8967 . + . ID=g11403.t1.exon5;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 8758 8967 . + 2 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 9149 9288 . + . ID=g11403.t1.exon6;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 9149 9288 . + 2 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 9501 9677 . + . ID=g11403.t1.exon7;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 9501 9677 . + 0 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . exon 9801 10168 . + . ID=g11403.t1.exon8;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . CDS 9801 10052 . + 0 ID=cds.g11403.t1;Parent=g11403.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 10053 10168 . + . ID=g11403.t1.utr3p1;Parent=g11403.t1 #PROT g11403.t1 g11403 MASLSSPVVIYWPRHLADSVQCGWLIGVRFAADITENAYSSRDLTGGVAGAETICVVGIIDSTRMCSCDESMTPLLSVLGCLASASLEVIGSVGCTCVHGDHMRNGHTKTMLELVDDEALRWRILGADTREIVSITYDPPSTLEYFSSQPLRLDDGVDGGGAAYSQHAVDPTSFDRVLSLANKSALIENSIAEGLDSLRLRVMPIRTLRVGASLLALIAWTARAVSFASAVVLLAIAHFVRIVAGFALFAIENRFGRYSLVTVSAFAGQLALRTRQAVVLPVSVYRLFHTSANQQNAPRQSSLDIHKWQRSYIRVFNAVSLIACDIALGWGVASVAWHCSESIVAFIPSFVESHAVAGIKTNIEWLTGAPGGLKVNRDLGRFEGQLFSVFVDAWAVVIDHGLSRHVSTLLSCFCAVSRLGASFGLSFAHDIFVVTCLHLSFIHRVAAFVHNGHVTMLGSLWRLFRGKKWNVLRNRVDSHEPRTDRQLVGTAMFAILLILFPTTAVFYAYFFIVRGVVAIMQTSFQAAVFALNHFPLYAVILRLVRPGQLPSCIELIPGERDPRFGPQLVLKQRPAPLGTLFHEYGSILRAVASIYPPGTIVMSVLSGRLLPHLPRPQSYLTPSSLPPLSESWSALSCANNALLSLLLHRRRAVK* # PASA_UPDATE: g11404.t1, single gene model update, valid-1, status:[pasa:asmbl_3773,status:3], valid-1 NODE_220_length_30916_cov_38.5585 . gene 10531 12392 . - . ID=g11404;Name=g11404.t1 NODE_220_length_30916_cov_38.5585 . mRNA 10531 12392 . - . ID=g11404.t1;Parent=g11404;Name=g11404.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 12322 12392 . - . ID=g11404.t1.utr5p1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . exon 12171 12392 . - . ID=g11404.t1.exon1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . CDS 12171 12321 . - 0 ID=cds.g11404.t1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . exon 11731 11814 . - . ID=g11404.t1.exon2;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . CDS 11731 11814 . - 2 ID=cds.g11404.t1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . exon 11097 11237 . - . ID=g11404.t1.exon3;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . CDS 11097 11237 . - 2 ID=cds.g11404.t1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . exon 10531 10761 . - . ID=g11404.t1.exon4;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . CDS 10565 10761 . - 2 ID=cds.g11404.t1;Parent=g11404.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 10531 10564 . - . ID=g11404.t1.utr3p1;Parent=g11404.t1 #PROT g11404.t1 g11404 MADEDFKDIEETPGYKAPKQVDLDTLKNLDANDESLNKWKQQLLKGAEGVDNSDPRRVIVEKLSLVAEGRVDVDLDLTGDLKKLKSTPFIIKEGSEYRIKVTFRVTKDVVAGLKYIHAVKRGPVTVDKASMMVGSYGPSPTSVTYLSQPEEAPSGMLARGKYDVKSKFIDDDKNNHLDWEWSFEIKKDWQ* # PASA_UPDATE: g11406.t1, single gene model update, valid-1, status:[pasa:asmbl_3774,status:12], valid-1 NODE_220_length_30916_cov_38.5585 . gene 18024 19913 . - . ID=g11406;Name=g11406.t1 NODE_220_length_30916_cov_38.5585 . mRNA 18024 19913 . - . ID=g11406.t1;Parent=g11406;Name=g11406.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 19838 19913 . - . ID=g11406.t1.utr5p1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 19481 19913 . - . ID=g11406.t1.exon1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 19481 19837 . - 0 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 19145 19259 . - . ID=g11406.t1.exon2;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 19145 19259 . - 0 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 18923 19007 . - . ID=g11406.t1.exon3;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 18923 19007 . - 2 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 18733 18787 . - . ID=g11406.t1.exon4;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 18733 18787 . - 1 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 18395 18463 . - . ID=g11406.t1.exon5;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 18395 18463 . - 0 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . exon 18024 18130 . - . ID=g11406.t1.exon6;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . CDS 18053 18130 . - 0 ID=cds.g11406.t1;Parent=g11406.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 18024 18052 . - . ID=g11406.t1.utr3p1;Parent=g11406.t1 #PROT g11406.t1 g11406 MRARMSGVLSARCWRASSLVRPHAFLCVSARGAHTTPQSRSISTQSESDGSLFSGARTVGTESMDDKSVDAQSDLSAGGVKRRIDAIIRVDHAGELGADRIYAGQMFVLGKSSVGPVIKEMWDQEKAHLSKFNDLVNEHRVRPTLLQPIWNVAGFALGAGTALLGKEAAMACTVAVETVITDHYNEQLRQLNIMGKEEHKDLRKVIRTFRDDEMAHHDHGIAHGAEMAPMYQALSSTIAMGCKAAIWLSKRI* # ORIGINAL: g11405.t1 original gene structure, not modified by PASA NODE_220_length_30916_cov_38.5585 AUGUSTUS gene 12955 17652 . + . ID=g11405;Name=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS mRNA 12955 17652 . + . ID=g11405.t1;Parent=g11405;Name=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 12955 13045 . + . ID=g11405.t1.exon1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 12955 13045 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 13172 13274 . + . ID=g11405.t1.exon2;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 13172 13274 . + 2 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 13361 13474 . + . ID=g11405.t1.exon3;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 13361 13474 . + 1 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 13614 13809 . + . ID=g11405.t1.exon4;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 13614 13809 . + 1 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 14010 14092 . + . ID=g11405.t1.exon5;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 14010 14092 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 14447 14648 . + . ID=g11405.t1.exon6;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 14447 14648 . + 1 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 14963 15076 . + . ID=g11405.t1.exon7;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 14963 15076 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 15283 15408 . + . ID=g11405.t1.exon8;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 15283 15408 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 15684 15920 . + . ID=g11405.t1.exon9;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 15684 15920 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 16241 16335 . + . ID=g11405.t1.exon10;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 16241 16335 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 16613 16763 . + . ID=g11405.t1.exon11;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 16613 16763 . + 1 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 17007 17129 . + . ID=g11405.t1.exon12;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 17007 17129 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS exon 17353 17652 . + . ID=g11405.t1.exon13;Parent=g11405.t1 NODE_220_length_30916_cov_38.5585 AUGUSTUS CDS 17353 17652 . + 0 ID=cds.g11405.t1;Parent=g11405.t1 #PROT g11405.t1 g11405 MATEAADGAEGEVPQQAAPEEKPLELLTVDSLDPLTVYSATTVLPMIKDLQAQHGLRHGDYQRYRGYCSRRLMRLGHALKFTHGRHSKFLNKKVEVQHLTDARFLHIPLMKAERAWGYAMELKNLANTDQRKRHHLRRRLTKAAKHAEQLEALCASGRADGRSQLEAQAYLYFMQGSLAFELQDWKAAFDKFGKASTIYDKLGAASAPSLSPLYAQRVEEISPSMRYCAYNLGMDQQAADDLVGLRLKAASAGEADALAAKLDTVLSQTREGHAQSTIAEIQWLGKPVPVKSEKLKALLLKVQVSEKQLGQAEEAKRLAVYDQLFVDINDAVQAARDELKADASAKIRSQKSEANRAHTESVLAYLSFVRLDRTIDRNLVMIEGMRKRHAAGASQQSQSAQDADGKPVRADDIVRMYENLLQNVVDMQEITGLAEDVDMGKEFAARTLAFKAFRSFFLGESNLASRRLAEAVALYDRAATHARAATAHYAECTRGPRAKMLEACAESKQLESLHAHIRGQKCAAQSYFAAGEEAREGVSDNVLQKPLYDRLDSFVYDPSLLGKKPNLVSFPPALEPVAVKPFVFDLALNHVAYPDFSSHVQHDAPATHADHAASETSADSEQPQAQQGAGIRGMIKGLWGWGKQ* # PASA_UPDATE: g11408.t1, single gene model update, valid-1, status:[pasa:asmbl_3775,status:3], valid-1 NODE_220_length_30916_cov_38.5585 . gene 24664 26714 . - . ID=g11408;Name=g11408.t1 NODE_220_length_30916_cov_38.5585 . mRNA 24664 26714 . - . ID=g11408.t1;Parent=g11408;Name=g11408.t1 NODE_220_length_30916_cov_38.5585 . five_prime_UTR 26644 26714 . - . ID=g11408.t1.utr5p1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . exon 26602 26714 . - . ID=g11408.t1.exon1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . CDS 26602 26643 . - 0 ID=cds.g11408.t1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . exon 26306 26349 . - . ID=g11408.t1.exon2;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . CDS 26306 26349 . - 0 ID=cds.g11408.t1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . exon 26102 26174 . - . ID=g11408.t1.exon3;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . CDS 26102 26174 . - 1 ID=cds.g11408.t1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . exon 25431 25532 . - . ID=g11408.t1.exon4;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . CDS 25431 25532 . - 0 ID=cds.g11408.t1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . exon 24664 25202 . - . ID=g11408.t1.exon5;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . CDS 25044 25202 . - 0 ID=cds.g11408.t1;Parent=g11408.t1 NODE_220_length_30916_cov_38.5585 . three_prime_UTR 24664 25043 . - . ID=g11408.t1.utr3p1;Parent=g11408.t1 #PROT g11408.t1 g11408 MTDFEDWEAAEEAGAFDSKQKREEETVLRLNEVPGGTVVPDSTGAGKVEFIPQMRILKRPSTDGKSPSQTPAANSPATTQKSLAEREAEYARARARIMGTDPTVPAAQTAEDSPGKRAEPVRQPRGPPDGRKGFGPSPQ* # ORIGINAL: g7691.t1 original gene structure, not modified by PASA NODE_2559_length_5900_cov_42.2153 AUGUSTUS gene 44 2068 . + . ID=g7691;Name=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS mRNA 44 2068 . + . ID=g7691.t1;Parent=g7691;Name=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS exon 44 865 . + . ID=g7691.t1.exon1;Parent=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS CDS 44 865 . + 1 ID=cds.g7691.t1;Parent=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS exon 1217 1447 . + . ID=g7691.t1.exon2;Parent=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS CDS 1217 1447 . + 1 ID=cds.g7691.t1;Parent=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS exon 1966 2068 . + . ID=g7691.t1.exon3;Parent=g7691.t1 NODE_2559_length_5900_cov_42.2153 AUGUSTUS CDS 1966 2068 . + 1 ID=cds.g7691.t1;Parent=g7691.t1 #PROT g7691.t1 g7691 RVLVDIVNKPAADSAFPGIYLDRLPNVSGANFWAPDGRTLVTDTQYRSHRSIIAIDTTSGHVRRVTGTESGQWNIAGVGSDGTLLAISSTPDSFPSVVVANASADGTVASPSSWKPLFAGRSLSNEVHWDVLRVSDTCEGIYLRPKGADFSAPLPLIAIPHGGPHSAFAACFNLPYAMLCRLGYAVVMINYTGSVGYGQASVLALLGNVGRMDVDDCKNTIEAAVAASGGSAKTSVYGGSHGGFLAGHLTGQFPQMFAACVMRNPVIDVPAMSGVTDIPDWCWGEAGANYDAAESPSPAILKAMYDKSPIRHVDAAKVPTLVMIGKKDLRVPPSQGTLWYYGLRRNGVDAKMLVYPESSHGLVEFEAEIDGFFSTSIWMERYLK* # PASA_UPDATE: g7692.t1, single gene model update, valid-1, status:[pasa:asmbl_4553,status:3], valid-1 NODE_2559_length_5900_cov_42.2153 . gene 2303 5539 . - . ID=g7692;Name=g7692.t1 NODE_2559_length_5900_cov_42.2153 . mRNA 2303 5539 . - . ID=g7692.t1;Parent=g7692;Name=g7692.t1 NODE_2559_length_5900_cov_42.2153 . five_prime_UTR 5459 5539 . - . ID=g7692.t1.utr5p1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 5242 5539 . - . ID=g7692.t1.exon1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 5242 5458 . - 0 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 4939 5063 . - . ID=g7692.t1.exon2;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 4939 5063 . - 2 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 4452 4687 . - . ID=g7692.t1.exon3;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 4452 4687 . - 0 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 3937 4012 . - . ID=g7692.t1.exon4;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 3937 4012 . - 1 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 3315 3544 . - . ID=g7692.t1.exon5;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 3315 3544 . - 0 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 2896 2986 . - . ID=g7692.t1.exon6;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 2896 2986 . - 1 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . exon 2303 2573 . - . ID=g7692.t1.exon7;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . CDS 2478 2573 . - 0 ID=cds.g7692.t1;Parent=g7692.t1 NODE_2559_length_5900_cov_42.2153 . three_prime_UTR 2303 2477 . - . ID=g7692.t1.utr3p1;Parent=g7692.t1 #PROT g7692.t1 g7692 MALAHDTSINDMHSALDPIPATTGEFIPPSPRDCLKNNTIGAMVLKKSPVVDISCTDNIDDALRKLQKHNVTSAPVYDSKKDEYIGLLSTYDLMIYIAFGFFHPDECTIYPGEMEARKADIAGVPVGDLAGTADFVRVGWWDHAGLVVYEPSVSVYEAMCGIFSGSGRALVRTAEGDQFNDERAQEPRSLDHRMLSETDLLRFICQNAVSFHSILGQTIASLSLGEHQPVVSVSMDLPTLSAFRRMFQSRADAVAVVNTNGTIISTLSPSDLRGMRLNSLGDLMLPVSEFLSKRRFGTIAPPLAVSATATLLTAAAVAIMGSVHRVWVIDKSGKPTSAVRVSDMLRAVFQSVADEQ* # PASA_UPDATE: g7571.t1, single gene model update, valid-1, status:[pasa:asmbl_4189,status:12],[pasa:asmbl_4190,status:13], valid-1 NODE_2385_length_6468_cov_35.9768 . gene 263 4375 . + . ID=g7571;Name=g7571.t1 NODE_2385_length_6468_cov_35.9768 . mRNA 263 4375 . + . ID=g7571.t1;Parent=g7571;Name=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 263 388 . + . ID=g7571.t1.exon1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 263 388 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 624 770 . + . ID=g7571.t1.exon2;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 624 770 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 1214 1315 . + . ID=g7571.t1.exon3;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 1214 1315 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 1635 1745 . + . ID=g7571.t1.exon4;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 1635 1745 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 2179 2286 . + . ID=g7571.t1.exon5;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 2179 2286 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 2622 2717 . + . ID=g7571.t1.exon6;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 2622 2717 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 3061 3207 . + . ID=g7571.t1.exon7;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 3061 3207 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 3465 3563 . + . ID=g7571.t1.exon8;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 3465 3563 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . exon 3796 4375 . + . ID=g7571.t1.exon9;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . CDS 3796 3906 . + 0 ID=cds.g7571.t1;Parent=g7571.t1 NODE_2385_length_6468_cov_35.9768 . three_prime_UTR 3907 4375 . + . ID=g7571.t1.utr3p1;Parent=g7571.t1 #PROT g7571.t1 g7571 MMRSHVDRYTAVSGFIFLRFFCPAILGPQLFDMAEEIPDPKTARALTLIAKTLQNLANLVEFGQKEPYMARMNEVIVSRMSQMRAFLDTVSTSTETPAVVTPQIDLELETARLYRFFLQSREKMQSIHTAAGMTEPPAGSDPRVGRATSWDANSRDTSDPAKAARLRRSQHFQKFLLAIGSIEQEHDAVIMQTSERKQSMVPSTSTNSLSSPKPHTKLSRKIVSAQEVEECTATLLRVATQTLGDAQDSIGDQEGLLNATRPLVIVSHQLIALGDHAAKTLAAELDPERSAVIVSAVNQLNSRLASFVAQAKAVVSVRGQNRAQMDKLVDTVKALGLAASGVMGAVTN* # ORIGINAL: g7572.t1 original gene structure, not modified by PASA NODE_2385_length_6468_cov_35.9768 AUGUSTUS gene 5326 6193 . + . ID=g7572;Name=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS mRNA 5326 6193 . + . ID=g7572.t1;Parent=g7572;Name=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS exon 5326 5436 . + . ID=g7572.t1.exon1;Parent=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS CDS 5326 5436 . + 0 ID=cds.g7572.t1;Parent=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS exon 5688 5795 . + . ID=g7572.t1.exon2;Parent=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS CDS 5688 5795 . + 0 ID=cds.g7572.t1;Parent=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS exon 6056 6193 . + . ID=g7572.t1.exon3;Parent=g7572.t1 NODE_2385_length_6468_cov_35.9768 AUGUSTUS CDS 6056 6193 . + 0 ID=cds.g7572.t1;Parent=g7572.t1 #PROT g7572.t1 g7572 MIVKDIMQTLIDDNLVELEKIGAANFYWAFPSKGLQIRKRKIGEMNDSLQAHNAKRVALEAEIKASKSGKEESDERAQLQLLVKAAEERQADLAKELQKFRECDPEVIDAKSGSRHES* # ORIGINAL: g2811.t1 original gene structure, not modified by PASA NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS gene 268 1215 . + . ID=g2811;Name=g2811.t1 NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS mRNA 268 1215 . + . ID=g2811.t1;Parent=g2811;Name=g2811.t1 NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS exon 268 538 . + . ID=g2811.t1.exon1;Parent=g2811.t1 NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS CDS 268 538 . + 0 ID=cds.g2811.t1;Parent=g2811.t1 NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS exon 881 1215 . + . ID=g2811.t1.exon2;Parent=g2811.t1 NODE_4695_length_1321_cov_35.8403_potentialcontaminant AUGUSTUS CDS 881 1215 . + 2 ID=cds.g2811.t1;Parent=g2811.t1 #PROT g2811.t1 g2811 PNGWDLENLSLCRRMMPPDVVRMLEEEKKFVEEEEFQRRKEREIENLKFNEREKKLIEAVISRWRQAAVNNIQSTLGKFELMRKFGSRWKSQLRKIKQQRIEAERLAIEAAAAAEEARLNKELRPVESPTNLSSPSYTNVGMASPSFTTQSLVDLQESMQEEKTAPAEVFVPIIIPPRFRRKALALDRKPSFSSLSITEKAK # ORIGINAL: g6553.t1 original gene structure, not modified by PASA NODE_1079_length_14135_cov_51.0178 AUGUSTUS gene 8911 13215 . - . ID=g6553;Name=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS mRNA 8911 13215 . - . ID=g6553.t1;Parent=g6553;Name=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 13149 13215 . - . ID=g6553.t1.exon1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 13149 13215 . - 0 ID=cds.g6553.t1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 11729 12995 . - . ID=g6553.t1.exon2;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 11729 12995 . - 2 ID=cds.g6553.t1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 10822 11508 . - . ID=g6553.t1.exon3;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 10822 11508 . - 1 ID=cds.g6553.t1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 10445 10556 . - . ID=g6553.t1.exon4;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 10445 10556 . - 1 ID=cds.g6553.t1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 9643 9993 . - . ID=g6553.t1.exon5;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 9643 9993 . - 0 ID=cds.g6553.t1;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS exon 8911 9345 . - . ID=g6553.t1.exon6;Parent=g6553.t1 NODE_1079_length_14135_cov_51.0178 AUGUSTUS CDS 8911 9345 . - 0 ID=cds.g6553.t1;Parent=g6553.t1 #PROT g6553.t1 g6553 MAGRQAQSADAPDMLLTVTITEGRGFPRRVGHNLIVEVKIGAEAPITSDPVALDTTCSINTDLSWETDRRAMEYFRLHRTPVRLTCFDVAANGTRDALGYANLDIRDTLSGGLRLRTLPLLGRRAAMKEKPEITAGLRLERANEAVTFDDAVRATVEQEREMADRARRELAAERAKGKGDDVGGNQHRSRDVGAGDGDDGVVVGKVTGVQFGEANFRKPIASSSSGAHRDESGDEIRGNTVRGVRTDRDSGRAEPDSLDGGEGDRGDSDGNEESDVGNGHDDGDEGDRAPPAKAHNQSRGGHVHAEGTSPLRPQRTLAAPVVPGDDSASADTYTIDRKNDLFNPPVTRHLHPDDLSTYHLRYAIDIRSTKELNANVPLSVYFRYSYPFFGSSSPVFTHPPLELERGTERPVSNGFCAFDFTASAGQLRTYLDRVPLTIEMYHKDKFLRDVLLGIARVSLASVLSAPLTTLDSGIGKQQTHDSYVSVCAFEEGGAVTKMAEVRVLLALQVLGIVGDPAAHVTSRSDVRPDHLPHHHDALPRHDGVPRDVPAGISAFRPSAHVSREAADVGDAHAHAHHGHAHGQTNPHTNVHDVEGVSRESPEYRAAIDLELWKTTEEERFMRRLADREAQLLAALTDEFKKRDREREEVVRRKTTEYEKLETALRSSLDELETRERALLRGEEELRMQQERLQREFQRDKDELKDASRRMQDDMVRKMELERSRAKDAERAKERLERELRETEQRLTQVETDFASHRRQHAQKPETKLSEELRSVRGELADVVQRLDTAVKSKKHYKSQWARALREIATLRQKEAADAEARLRRERAEVEQLRLRYLAREDIDVARGEREQLAGIREQITHLKHAVESGQAHVTDASRQRSSSPRKGKGDRNFVNNNENSNDNNNRGRKFTAQDANTSGDDDDGDRAVVELQRLISEREALSRTGAYTATNPIMVELDRRINALLGVASSSP* # PASA_UPDATE: g6552.t1, single gene model update, valid-1, status:[pasa:asmbl_297,status:12], valid-1 NODE_1079_length_14135_cov_51.0178 . gene 2156 8389 . + . ID=g6552;Name=g6552.t1 NODE_1079_length_14135_cov_51.0178 . mRNA 2156 8389 . + . ID=g6552.t1;Parent=g6552;Name=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 2156 3506 . + . ID=g6552.t1.exon1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 2156 3506 . + 0 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 3703 3749 . + . ID=g6552.t1.exon2;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 3703 3749 . + 2 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 4028 4165 . + . ID=g6552.t1.exon3;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 4028 4165 . + 0 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 4415 4583 . + . ID=g6552.t1.exon4;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 4415 4583 . + 0 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 5074 5245 . + . ID=g6552.t1.exon5;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 5074 5245 . + 2 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 5660 5772 . + . ID=g6552.t1.exon6;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 5660 5772 . + 1 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 6006 6256 . + . ID=g6552.t1.exon7;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 6006 6256 . + 2 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 6593 6792 . + . ID=g6552.t1.exon8;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 6593 6792 . + 0 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 6976 7198 . + . ID=g6552.t1.exon9;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 6976 7198 . + 1 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 7401 7497 . + . ID=g6552.t1.exon10;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 7401 7497 . + 0 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . exon 7997 8389 . + . ID=g6552.t1.exon11;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . CDS 7997 8199 . + 2 ID=cds.g6552.t1;Parent=g6552.t1 NODE_1079_length_14135_cov_51.0178 . three_prime_UTR 8200 8389 . + . ID=g6552.t1.utr3p1;Parent=g6552.t1 #PROT g6552.t1 g6552 MSIAPSALSQRRRLLLYSPHDRDKILVASNDLRLYELSFRSQSQTVDGPAGLNYQSSQQRAHRSDDTHVSSRPKRGVTLVGVRSELPLWKCAAWYERPQPRHLLAVGQSNGNVTLTAFGAEADRASGVLCELRPKHARACNAVSWNTAAPTHLAAALEKARNDASLLVWDIASSLSADTSASGVDSTAPTPRPDPTSRSQSSLKPLAELCQYEAVQSVVWFPAEKSVLAAGVGMKYLRIFDLREESTSRSAAVATTKAVFGACIDPFNGNRLASFSTTEGIVKVWDVRRMSDPILSLTTDPKQIAHISWCPSRAGLLAALCKDSLAVDVWSIAELEGENMADVIGNAATAMTLMGGAANASSASLAMDAGSGVMQSVSGLGVSGGMSQSAASGLDVSGGVSSASGAVVQRSFRAAVTDSPIGSFCWHPTTAATLATITAMQGVVEEFTIHDTACMSWSPHGHFTWADGRRAKTVFCGRPETSPDAHPGLAAELETDISLTMYRRAKEGYGMQISSNLKLAENDGELNTLWSWLSHVSGLFKKGRVQIGKQDFSFVGVKAILNADASALGAVSLSSSSSMSSVAPSMHDQSLFFPVHQSTQRRLALAVCGWGFDPRDRTALEAALKKLEDEGHFEKAAAIALFHLDIRRAIVALKSGAASDATKVSPEKKNALNLIALALAGYTDSKNTLWREMCGSMHESLPDAYLRASFAFLTSGERDGFVDVLRETDMALVDRIGFACRFLPDAQLKQYVDQIAEASVKTGRLSGILLTGLTGEGVDLMDAYVNRTGDVQTACLAMARTRQQDQRVRRWTEVYRELLDQWRLWHERASLDVSRLHLDDQLRPAQQVFVRCNFCNQSIASAMISMGPGGRPGGYASSGSGGPPSRPKVTSCPSCRKPLPRCALCLMPMGTAASAPVASQGEEADTTLATPRQPGNFRSWFTWCQSCRHGGHAGHVIEWFNTHSECPVTGCDCRCMELDRSSLDRNG* # PASA_UPDATE: g4881.t1, single gene model update, valid-1, status:[pasa:asmbl_7412,status:12], valid-1 NODE_4522_length_1506_cov_33.0272 . gene 795 1486 . + . ID=g4881;Name=g4881.t1 NODE_4522_length_1506_cov_33.0272 . mRNA 795 1486 . + . ID=g4881.t1;Parent=g4881;Name=g4881.t1 NODE_4522_length_1506_cov_33.0272 . five_prime_UTR 795 940 . + . ID=g4881.t1.utr5p1;Parent=g4881.t1 NODE_4522_length_1506_cov_33.0272 . exon 795 1182 . + . ID=g4881.t1.exon1;Parent=g4881.t1 NODE_4522_length_1506_cov_33.0272 . CDS 941 1182 . + 0 ID=cds.g4881.t1;Parent=g4881.t1 NODE_4522_length_1506_cov_33.0272 . exon 1471 1486 . + . ID=g4881.t1.exon2;Parent=g4881.t1 NODE_4522_length_1506_cov_33.0272 . CDS 1471 1486 . + 1 ID=cds.g4881.t1;Parent=g4881.t1 #PROT g4881.t1 g4881 MARLSAVVACAAVAAIVACMSVPAQADIYMHNLRGSNNRLDEARRDRNNANRLFDSQNNNRGGYNVGSLYYYTGSTIPIEWRFEY* # PASA_UPDATE: g578.t1, single gene model update, valid-1, status:[pasa:asmbl_6320,status:12], valid-1 NODE_3622_length_3100_cov_35.1088 . gene 77 2791 . + . ID=g578;Name=g578.t1 NODE_3622_length_3100_cov_35.1088 . mRNA 77 2791 . + . ID=g578.t1;Parent=g578;Name=g578.t1 NODE_3622_length_3100_cov_35.1088 . five_prime_UTR 77 77 . + . ID=g578.t1.utr5p1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . exon 77 228 . + . ID=g578.t1.exon1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 78 228 . + 0 ID=cds.g578.t1;Parent=g578.t1;5_prime_partial=true NODE_3622_length_3100_cov_35.1088 . exon 813 902 . + . ID=g578.t1.exon2;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 813 902 . + 2 ID=cds.g578.t1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . exon 1175 1283 . + . ID=g578.t1.exon3;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 1175 1283 . + 2 ID=cds.g578.t1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . exon 1576 1647 . + . ID=g578.t1.exon4;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 1576 1647 . + 1 ID=cds.g578.t1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . exon 1854 1980 . + . ID=g578.t1.exon5;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 1854 1980 . + 1 ID=cds.g578.t1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . exon 2223 2791 . + . ID=g578.t1.exon6;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . CDS 2223 2468 . + 0 ID=cds.g578.t1;Parent=g578.t1 NODE_3622_length_3100_cov_35.1088 . three_prime_UTR 2469 2791 . + . ID=g578.t1.utr3p1;Parent=g578.t1 #PROT g578.t1 g578 HEGPVWQVAWAHPKFGNVLASCSYDRRIIIWKESGNQWVRLHEYTGHTSSVNSISWAPHEHGLLLAGASSDGFVSVISSKGDGVWESQKFPAHQIGVNAISWAPAATPGALVNPSENPSSLQPPVKRFVTGGCDNLVKIWRFSDGENQWKVEDELAGHSDWVRDVAWAPSIGLPTSTIASASQDAQVIVWTQESGQDGWKQRVLAKFNDVAWRVSWSVTGNILAASTGDNHVTLWKESLEGDWNCISDLDENSQISADGLAANR* # PASA_UPDATE: g8676.t1, single gene model update, valid-1, status:[pasa:asmbl_5168,status:12],[pasa:asmbl_5169,status:12], valid-1 NODE_2877_length_4866_cov_40.149 . gene 3420 4369 . - . ID=g8676;Name=g8676.t1 NODE_2877_length_4866_cov_40.149 . mRNA 3420 4369 . - . ID=g8676.t1;Parent=g8676;Name=g8676.t1 NODE_2877_length_4866_cov_40.149 . five_prime_UTR 4332 4369 . - . ID=g8676.t1.utr5p1;Parent=g8676.t1 NODE_2877_length_4866_cov_40.149 . exon 4044 4369 . - . ID=g8676.t1.exon1;Parent=g8676.t1 NODE_2877_length_4866_cov_40.149 . CDS 4044 4331 . - 0 ID=cds.g8676.t1;Parent=g8676.t1 NODE_2877_length_4866_cov_40.149 . exon 3420 3932 . - . ID=g8676.t1.exon2;Parent=g8676.t1 NODE_2877_length_4866_cov_40.149 . CDS 3558 3932 . - 0 ID=cds.g8676.t1;Parent=g8676.t1 NODE_2877_length_4866_cov_40.149 . three_prime_UTR 3420 3557 . - . ID=g8676.t1.utr3p1;Parent=g8676.t1 #PROT g8676.t1 g8676 MLSASFLLSKFIPKAAPSLVLRTAKLSTMAAAQSRKAVLCCDLQYDILGFYPAEKQQELIASAQKILDATRQHGHLPIYVRVAFQNGYPEVSPRNIMFNYLKGQGLLKDATKGTTIAAEITPKEGEAVVTKSRVGAFSTTNLRTILTANNITEIVLFGIATSGVVLTTVREAADMDYSITVLSDACADRVEEVHDVLIKQVFPRQAAVKTADEWIKSLSA* # ORIGINAL: g8675.t1 original gene structure, not modified by PASA NODE_2877_length_4866_cov_40.149 AUGUSTUS gene 675 2744 . + . ID=g8675;Name=g8675.t1 NODE_2877_length_4866_cov_40.149 AUGUSTUS mRNA 675 2744 . + . ID=g8675.t1;Parent=g8675;Name=g8675.t1 NODE_2877_length_4866_cov_40.149 AUGUSTUS exon 675 2744 . + . ID=g8675.t1.exon1;Parent=g8675.t1 NODE_2877_length_4866_cov_40.149 AUGUSTUS CDS 675 2744 . + 0 ID=cds.g8675.t1;Parent=g8675.t1 #PROT g8675.t1 g8675 MAAQAFKTAKLASAAASAPFRSFLFLNKGGLKNISKMQTRPDWFLIDFEDGCAPRDKVSTRILAQNVIRAGDFAGENVCVRLNNLENLSEIRRDLKHVMHENVKAYLCPKLRSVNCLRTYEELIAEAEYEAGIREGHSSIFVNIECPAGVLNAQEIGAASARNVAVAFGHADYLAESGGSYNFEGLFAAKSLAVMAAKANKLHVIDTPHLKIADLDGLEKESVRSRDMGFSGKFALHPSQLSTIHRVFTPSVGEVQEAERILAASNGIAQETGAFVGPPHRLKAAQVLDQATRCQPRMMHAHGMHASAGAPTVVGTSRRYGRAPDKLAAGMRIESPYELTLTEGMRMQWHSFFYTPGRADTSDLFAKASGIAGGAVIPYDLMLNLAMGCSVDVFSETCKLHLGLADCVYERPAHAGDTVRNEVEILRVGEPTSSGKYRVVESLHSLTNQRGERVFSLVKRSLFDANEMKGVAAGTAAPSFTPARHFDAIFKKDGARFGDVRGNHFGHAVRPNQLLLHGASRPIGVSENLLFCNMMRNTHSLHYDTQRYSGEGDILVSGGYILSSVLALSGRDLREIVHQEIVGTSHVGKLRPMDPLGAISFVRDVKPIAGTNYEEVLVKTIGLKGVDAERDLGGKGLPLSLFDDWDARAFRRPSEYQRICETQFPALHNRIVMQIVRKVIRPRTATAAA* # ORIGINAL: g2453.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 2766 3500 . + . ID=g2453;Name=g2453.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 2766 3500 . + . ID=g2453.t1;Parent=g2453;Name=g2453.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 2766 3080 . + . ID=g2453.t1.exon1;Parent=g2453.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 2766 3080 . + 0 ID=cds.g2453.t1;Parent=g2453.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 3183 3500 . + . ID=g2453.t1.exon2;Parent=g2453.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 3183 3500 . + 0 ID=cds.g2453.t1;Parent=g2453.t1 #PROT g2453.t1 g2453 MCRSRVLNSSNGVHSLNMAALVAYSDTWTRSLVVVGDPFVTPLGPFLFLDVAIILALSGSSTERICKVLRACGRIISTAERVTGPLRPIVVQTDKEPFSRLAVVLHGMGSRKDIKRFIEETFTDYDVERMLMLHGNMIEYLGYKNERDLYEANDKHIDNCSEATLKHLQALKHLIEKEKLDIMDKESMVPFPASGFVISADGHIVVFNER* # ORIGINAL: g2454.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 5533 7831 . + . ID=g2454;Name=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 5533 7831 . + . ID=g2454.t1;Parent=g2454;Name=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 5533 5581 . + . ID=g2454.t1.exon1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 5533 5581 . + 0 ID=cds.g2454.t1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 5698 5774 . + . ID=g2454.t1.exon2;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 5698 5774 . + 2 ID=cds.g2454.t1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 5939 6174 . + . ID=g2454.t1.exon3;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 5939 6174 . + 0 ID=cds.g2454.t1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 6350 7377 . + . ID=g2454.t1.exon4;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 6350 7377 . + 1 ID=cds.g2454.t1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 7498 7637 . + . ID=g2454.t1.exon5;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 7498 7637 . + 2 ID=cds.g2454.t1;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 7760 7831 . + . ID=g2454.t1.exon6;Parent=g2454.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 7760 7831 . + 0 ID=cds.g2454.t1;Parent=g2454.t1 #PROT g2454.t1 g2454 MFPTYYMLSFRKVYVNTRSIDLLKIISPYGAILERFNRLAQLGYLGFDGTGLVSAPAVPFNISGANAPLTKFVLRHPTKTPGEIVLFTDDVFLDIESAAYRRQWFDGYDAPNRNSPRWTASPVDYFVEAQNMLPEVPLVKDRFTIRRPDGGNAMDQLKSTPMAITITLETKLSKDAFREVTLTLAFNTLVSRVNRLSFTNRASEDSIEASEEYRTLTSGDISVYMQRGSRQIVPESKRTVPFGRTRRRLVLELSFANDVLVANVTEDIISDAGTHLLRTEQFPPWSITLFPSISFMAVFNAKGCYDANPLLNHSSVGNFTCSFTAIFSESMFNAEREPLNGKEFAMFVEGNRTDIRLAYLSRGGKYGDSSYVISFSFPKRTFLTANISVACITRRIRSSSSFNFIEDLSSPLYVNTQLCGSVDLLTKYYYREMISDGTGGHGCDRVAVSIQCIDGPCSCDTATGSVPPGTSTTGQSTGGGGDQNTGSGDHSPFASNTALITGIAVCVVVLRQSPPRNHDGLDDPDDDPRNNRA* # ORIGINAL: g2456.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 9604 11533 . - . ID=g2456;Name=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 9604 11533 . - . ID=g2456.t1;Parent=g2456;Name=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 10893 11533 . - . ID=g2456.t1.exon1;Parent=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 10893 11533 . - 0 ID=cds.g2456.t1;Parent=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 10423 10624 . - . ID=g2456.t1.exon2;Parent=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 10423 10624 . - 1 ID=cds.g2456.t1;Parent=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 9604 9903 . - . ID=g2456.t1.exon3;Parent=g2456.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 9604 9903 . - 0 ID=cds.g2456.t1;Parent=g2456.t1 #PROT g2456.t1 g2456 MATSDAVSLGPDRPPPLDETFVLVTSLANVIRDPLHIDLVESSVATNARIAVLASRLFNVYLLHCAHFNVESIPLDSKSCFAATVLVCNHHKSIDGKAKEYRARQHVFRTYFLPSLPAGYLPSNANLLQLNSSIGKELATSYKNYLKYGFYSHVIRYMCTKHDISRNAAKLVWVLLHKPDAYNSRFGFIGPLKEFDFDIKRAVDQAHSLKSLSRKSEEDDLEDFSDRVQIYDDEADGRTVTYKMRVDLRKVTMGMVSLADVIPTTINLDKPYEGFDVGVNEAEMRNPYILVACKKEDCKGKKKDGSARFHSHKIHKLFNCKSCKKVWNRDENAAQNIEDIYEKYAETWERPAYMRRSGDRGISTRMRRRLVENKVTAVGD* # ORIGINAL: g2452.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 1 1636 . - . ID=g2452;Name=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 1 1636 . - . ID=g2452.t1;Parent=g2452;Name=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 1614 1636 . - . ID=g2452.t1.exon1;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 1614 1636 . - 0 ID=cds.g2452.t1;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 1009 1463 . - . ID=g2452.t1.exon2;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 1009 1463 . - 1 ID=cds.g2452.t1;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 358 783 . - . ID=g2452.t1.exon3;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 358 783 . - 2 ID=cds.g2452.t1;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 1 188 . - . ID=g2452.t1.exon4;Parent=g2452.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 1 188 . - 2 ID=cds.g2452.t1;Parent=g2452.t1 #PROT g2452.t1 g2452 MELQLSKGSDGFPFFVISLPECHDGSVHSAVSTPVLCFSIQPFAVYGRQGKERKFRGNAWAPTSMDGHTPSRLTGDILLTVSHAGRTEQLGNYIGCAKLVCDKKFGVVVDKDCDQIATEARLKLQVQWNPFGLAAHALQCEYDNFCVLGFPKIFKGLAEIITPAFDSGVFGSAQGTTRDYRWYAKQIVESDFGMFGVTEVQTQVTKLDALPVSVGVMTALPSRPLTLQQVCEALRRYSDGSALTPAQMVDALRHLHHRDEYEERDDPSVGARKRPRLEPALPAALASADTIIDVNPLPSPHGNVSPPPDYTVYGATDADVDGPHFDAPDPALATDTLLLKPQDIFDALDSDNSFGNYVGNVDHL # ORIGINAL: g2455.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 8514 8987 . - . ID=g2455;Name=g2455.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 8514 8987 . - . ID=g2455.t1;Parent=g2455;Name=g2455.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 8514 8987 . - . ID=g2455.t1.exon1;Parent=g2455.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 8514 8987 . - 0 ID=cds.g2455.t1;Parent=g2455.t1 #PROT g2455.t1 g2455 MLSNDLLIELFAELRAADAVAFSVSARWLFKQYIGDVNYIEFRRWKNQLKKNEIQPDVNKEARDGNLQRVKYLLNNVKAQCSSGAMDKAAEYGHIAVVGWLSVNRKEGCTTNAMDFAAINGHLAVVEWLSANREEGCTTKAMDWAASKWPPRSRGMA* # ORIGINAL: g2457.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 12199 12480 . + . ID=g2457;Name=g2457.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 12199 12480 . + . ID=g2457.t1;Parent=g2457;Name=g2457.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 12199 12480 . + . ID=g2457.t1.exon1;Parent=g2457.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 12199 12480 . + 0 ID=cds.g2457.t1;Parent=g2457.t1 #PROT g2457.t1 g2457 MFQILIGSNGFPVEWDNGNLPASIRGLLSELDMGALIEGYDEEDYDCFVQKCKNHMDKIADDDCKTAFQNVSRKADAMGINITVSRHVLADKN* # ORIGINAL: g2460.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 18360 18785 . - . ID=g2460;Name=g2460.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 18360 18785 . - . ID=g2460.t1;Parent=g2460;Name=g2460.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 18360 18785 . - . ID=g2460.t1.exon1;Parent=g2460.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 18360 18785 . - 0 ID=cds.g2460.t1;Parent=g2460.t1 #PROT g2460.t1 g2460 MLVDEGWRVQEATARPRPPLRKVPTKVLPPPGALLPADVPDDLKRCWATAESAAKITGSCYLCTALTVSISFAICTQTRAEPGANAANCCLFACTRCAAELSARTIASDGVEVICLCHVRNCGSIQSEFIRSIDVDIATMC* # ORIGINAL: g2458.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 13435 15564 . - . ID=g2458;Name=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 13435 15564 . - . ID=g2458.t1;Parent=g2458;Name=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 15454 15564 . - . ID=g2458.t1.exon1;Parent=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 15454 15564 . - 0 ID=cds.g2458.t1;Parent=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 14085 15258 . - . ID=g2458.t1.exon2;Parent=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 14085 15258 . - 0 ID=cds.g2458.t1;Parent=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 13435 13982 . - . ID=g2458.t1.exon3;Parent=g2458.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 13435 13982 . - 2 ID=cds.g2458.t1;Parent=g2458.t1 #PROT g2458.t1 g2458 MDQPTHNRRDEDETDQHARKRRRSDTQSDISAGKQPERGVLERLCVAAVFVRPDNVATGLLSASCIRSSPYRDGYHQCSYLRQSIALNQSIALKEEWKIFQDLIKNNPAFSAVARWNTFGDVGQQFYITEYRAPHPAIETQNVQGPANANSDSAPLLVGMVLVGEEGPEPTAHKTLELLQSCKPSIPYIVNIGISGAVNDDLRYGDIVVGTSTTNCEAKRKAVDAAGPAGYEFQYSSRVLACAPFLVSALASIPVDPDCSTVFLDKVVEQGAEFVARAEASKAGSIYKAARARNLLREKTEDMFTVKDGHLVGIDVVSASKKFKAHLRQRDRKFLAIDNESYAFCDAVFRSMSAAKLAPAFAIIRGISDFGDGDKKKTENGIVGGAEAKDAPLPEQFPSQNIRALAMHNATNFFCLALSMGIFRPVSLAHHARTFVTAVLESSRLKKPMEASRKALLASGESKTFPPGGVNVHPFVVTLEEKDAASGSKIDRAEFARICERSGVGTYSERLWAKMAREQMTMEHFVDHFAKVGKGDLAKQMWEEVTESLPIEESAAVKRANLEAGLSKMDVGRVWEGIKSSPALRTPIVEFRHRSQANRTATRDGRSDLN* # ORIGINAL: g2459.t1 original gene structure, not modified by PASA NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS gene 15604 17535 . - . ID=g2459;Name=g2459.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS mRNA 15604 17535 . - . ID=g2459.t1;Parent=g2459;Name=g2459.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS exon 15604 17535 . - . ID=g2459.t1.exon1;Parent=g2459.t1 NODE_690_length_19023_cov_22.1544_potentialcontaminant AUGUSTUS CDS 15604 17535 . - 0 ID=cds.g2459.t1;Parent=g2459.t1 #PROT g2459.t1 g2459 MSSRAVDGSLLLDLSEEVLVHIVKLGRFTLTDVGHLRATCKRVCGFLDRIRDSVLNEDVVGNLSKYVPYWAWTFDRAAAMGHLEVIELLHEDEIKRGRSGIRCTTEATLCAIKRSDWNMFMFLVRNRKELSIAVTKGFSHWSPNTWTDLSDEVVQFLLCEAPSFLDELTASDAVNGPIRRGNVDLVSKLLPYVIDARMVLPLGEAFLEVRKTPALFEVVLAECRKRNLEELNLIRRVFRYAVIQSCNGPDLLDIALQHFPLALAELDAKGRAYLANIATDPAVISRLREFGLKRTVVNRWTEDLVFSVETEGAKVEMGAVASCLLREDYAATEFVAERCSVSWYQVSDAITKSGSLAALKWLHSRGRLDTTPEFLLRGHLCNPEHVDFSWPLARDGLPLSDGYTVGKLVQQNWFDFVIKADNLAMLRYLCEHLDVVGIYVVQPWARSANAAAESGFIDIISYMIDVNSQIAPVMDSTAARQANAFDLHSRPFDLTDTLEIAVRNGHVRLARLIGRRVPGLSLSLATVCASRRWSLFRWALEGLSAMETAERQKALEDGLLESIQRGCSEFVSWFEENEPDVFERCRPKFWMMLRRSRYMQFWYAFLSKHPTCVPETYVCGEEMLYDLRVLEQRLGIKIETQLI* # PASA_UPDATE: g350.t1, single gene model update, valid-1, status:[pasa:asmbl_7141,status:12], valid-1 NODE_424_length_23964_cov_42.7367 . gene 1953 7903 . + . ID=g350;Name=g350.t1 NODE_424_length_23964_cov_42.7367 . mRNA 1953 7903 . + . ID=g350.t1;Parent=g350;Name=g350.t1 NODE_424_length_23964_cov_42.7367 . five_prime_UTR 1953 2007 . + . ID=g350.t1.utr5p1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 1953 2050 . + . ID=g350.t1.exon1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 2008 2050 . + 0 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 2179 2244 . + . ID=g350.t1.exon2;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 2179 2244 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 2418 2600 . + . ID=g350.t1.exon3;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 2418 2600 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 2769 2903 . + . ID=g350.t1.exon4;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 2769 2903 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 4151 4213 . + . ID=g350.t1.exon5;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 4151 4213 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 4363 4465 . + . ID=g350.t1.exon6;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 4363 4465 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 4588 4865 . + . ID=g350.t1.exon7;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 4588 4865 . + 1 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 5172 5253 . + . ID=g350.t1.exon8;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 5172 5253 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 5367 5450 . + . ID=g350.t1.exon9;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 5367 5450 . + 1 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 5543 5660 . + . ID=g350.t1.exon10;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 5543 5660 . + 1 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 5798 6308 . + . ID=g350.t1.exon11;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 5798 6308 . + 0 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 6603 6693 . + . ID=g350.t1.exon12;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 6603 6693 . + 2 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 6869 6977 . + . ID=g350.t1.exon13;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 6869 6977 . + 1 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 7175 7420 . + . ID=g350.t1.exon14;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 7175 7420 . + 0 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . exon 7592 7903 . + . ID=g350.t1.exon15;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . CDS 7592 7597 . + 0 ID=cds.g350.t1;Parent=g350.t1 NODE_424_length_23964_cov_42.7367 . three_prime_UTR 7598 7903 . + . ID=g350.t1.utr3p1;Parent=g350.t1 #PROT g350.t1 g350 MARHRNIRNLDFDEDDYDDEDYLGRSYDDPCLSPTSEGFVYRRDGNQLGSYLAPAPTSGVSAGAVTRGGPAPAAPPVVQPNGKQREARDAPLTDEERALLFSVRDHVYSIFGEEYLDDEIDDAALRAGFDPERTVALLLEGKGGTFADSFSGPSPDDIVLAHRGNALGFSAAPEAKKSEDVPKRLDKEIASLNLKSDVRRDATKAAAGATSRTHTATQPQTQNPTHTQTQPQSRDRSQPQTPATRTPVELQSPCLSPKSVRRANAATADVIAEYKKARVAGKDAMNLIVIGHVDAGKSTLMGHLLFKLGEVNQRTMHKFESESKKAGKSSFAYAWVLDETAEERSRGITMEVSVTKFETSCKKIVLLDAPGHRDFIPSMISGAAQADVGILVVDASPGGFEAGFESGGQTREHAILARSLGVNQLIVAVNKLDVVGWSRERFDDISSRMRQFLKQAGYKEEALSFVPCSGLSGENLVSRTEARLSAWYTGPSIVEQIDRFAPVERPVEKALRLSVADVFKGSSGGITVGGKIESGVLQVGDRVLVAPSGELAAVKAIEAHDTAVPWAVAGDNVNVSIAGIEPAHVSVGNVLCDPSFPIRSTVKIVARIIVFDISVPITPGFPVLFHFQSVNEPANISKLVSLLNRSTGEVVKERPRCISKNSSAIVEVTTQRPVSVDLYRDSKEMGRFMLRSGDKTIAAGVITEL* # PASA_UPDATE: g352.t1, single gene model update, valid-1, status:[pasa:asmbl_7138,status:12], valid-1 NODE_424_length_23964_cov_42.7367 . gene 9665 11269 . - . ID=g352;Name=g352.t1 NODE_424_length_23964_cov_42.7367 . mRNA 9665 11269 . - . ID=g352.t1;Parent=g352;Name=g352.t1 NODE_424_length_23964_cov_42.7367 . five_prime_UTR 11239 11269 . - . ID=g352.t1.utr5p1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 11134 11269 . - . ID=g352.t1.exon1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 11134 11238 . - 0 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 10883 10995 . - . ID=g352.t1.exon2;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 10883 10995 . - 0 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 10574 10786 . - . ID=g352.t1.exon3;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 10574 10786 . - 1 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 10414 10475 . - . ID=g352.t1.exon4;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 10414 10475 . - 1 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 10280 10317 . - . ID=g352.t1.exon5;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 10280 10317 . - 2 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 10123 10183 . - . ID=g352.t1.exon6;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 10123 10183 . - 0 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 9879 10026 . - . ID=g352.t1.exon7;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 9879 10026 . - 2 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . exon 9665 9802 . - . ID=g352.t1.exon8;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . CDS 9682 9802 . - 1 ID=cds.g352.t1;Parent=g352.t1 NODE_424_length_23964_cov_42.7367 . three_prime_UTR 9665 9681 . - . ID=g352.t1.utr3p1;Parent=g352.t1 #PROT g352.t1 g352 MAGFIRKPWILPAVTCRESGAPGIPPKNPQAQILEFVHVGGASDSAIAVAYISDKRHFVRAVFTERAVANFKRTWADTPLPSTRGGLILIRDYFVTASKDFSEPIIGIGSFEFVGSESSSAFGDVDNIMADPEVSRILADWKIAKNAETERLFLSEPAESQAEAGGDIEAFGASSRKLNLSICRIPSLQAVTLSHLPGWDDPPHCTGPSSEALRDEFDEESRQLSQEPLELVFCDISGNDEDSGSSSSLDGNHAEEAGSSVPEIVKDFFIRSNVVETNVQSWIKKR* # ORIGINAL: g353.t1 original gene structure, not modified by PASA NODE_424_length_23964_cov_42.7367 AUGUSTUS gene 11563 14104 . + . ID=g353;Name=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS mRNA 11563 14104 . + . ID=g353.t1;Parent=g353;Name=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 11563 11631 . + . ID=g353.t1.exon1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 11563 11631 . + 0 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 11743 11798 . + . ID=g353.t1.exon2;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 11743 11798 . + 0 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 11924 12028 . + . ID=g353.t1.exon3;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 11924 12028 . + 1 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 12243 12298 . + . ID=g353.t1.exon4;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 12243 12298 . + 1 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 12692 12804 . + . ID=g353.t1.exon5;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 12692 12804 . + 2 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 12926 13047 . + . ID=g353.t1.exon6;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 12926 13047 . + 0 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 13149 13443 . + . ID=g353.t1.exon7;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 13149 13443 . + 1 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 13537 13756 . + . ID=g353.t1.exon8;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 13537 13756 . + 0 ID=cds.g353.t1;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 13932 14104 . + . ID=g353.t1.exon9;Parent=g353.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 13932 14104 . + 2 ID=cds.g353.t1;Parent=g353.t1 #PROT g353.t1 g353 MSVAVSASAAEAIERAIVVDRRPLHYSELALSLSIHPNAAKRALGGYASSNPSGIATVFVSRETGPHTYRLIRTNGWPPPDHNKSRVLSVPGLDAAIGSVIDHAAYSVSASGPAALPVPAVTAAASTVKNAGPAVKTTAKGSALQAMFRNVPEKNAAQKSKATALATAPAHDLSAVGEGTPTILSKDMPPVVATPVPPQAPQPPADVAVSRGTRTSPRTARSAAAAVATDSDGDGDQGDAPTAAVGQLRRVRRRVVSESPPSSPVKAIYEPTPPSKKRKSVSVDADDNAVEPDSKRAKESPQEDADAGDVGSFGAAQDTVTVEEAQVPPKPIKTTRTYVDKNGYMVTESVAPAAHPGLKSSPASTVPARDAIKPQGEKKPVPTEKKDSAKLPQRKIGDFFKR* # PASA_UPDATE: g355.t1, single gene model update, valid-1, status:[pasa:asmbl_7142,status:3], valid-1 NODE_424_length_23964_cov_42.7367 . gene 17413 20150 . + . ID=g355;Name=g355.t1 NODE_424_length_23964_cov_42.7367 . mRNA 17413 20150 . + . ID=g355.t1;Parent=g355;Name=g355.t1 NODE_424_length_23964_cov_42.7367 . five_prime_UTR 17413 17645 . + . ID=g355.t1.utr5p1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 17413 17832 . + . ID=g355.t1.exon1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 17646 17832 . + 0 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 17970 18160 . + . ID=g355.t1.exon2;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 17970 18160 . + 2 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 18282 18434 . + . ID=g355.t1.exon3;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 18282 18434 . + 0 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 18606 18984 . + . ID=g355.t1.exon4;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 18606 18984 . + 0 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 19231 19379 . + . ID=g355.t1.exon5;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 19231 19379 . + 2 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 19477 19584 . + . ID=g355.t1.exon6;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 19477 19584 . + 0 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . exon 19672 20150 . + . ID=g355.t1.exon7;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . CDS 19672 19878 . + 0 ID=cds.g355.t1;Parent=g355.t1 NODE_424_length_23964_cov_42.7367 . three_prime_UTR 19879 20150 . + . ID=g355.t1.utr3p1;Parent=g355.t1 #PROT g355.t1 g355 MGSCSSKGGTVVSPSPASTSKGADAAPVVAKSRKKSYAVKIDVGASILQEQEKGRPDVVFIFGGPGTCKGLILERLVDEYGFKLLSSEQLIMDGIRDKENAKGQQTLEETKQVFDFLRKEPWHLTLEFALKLIGQQIEKEKCDHGILVDVLPNHKALFRNEEAVEKCAEEMERFERRHIKCRFALNLCIPAERFDQAMDINAAARKTQAPPPEPDKNAAPKDPNKKEEAASDEADKSKTKRRYAAYVDASKPFVDYFEKNQRLVTVDVSTAPTDAVLDHVHKIFQNLKFNRAQKINTVAFFAMDGLTMGGVDLTKLGLETLGVKDILAKEGKFDTDVGKAIAQSTSQNETIPTTTMLHAVQAAMDRSRHSLGYVVDLSGITVNKDTLNPGDPSIMFLDGRVDGLLRFNIDHPIANKLPLQAIYTTRSLVLVFARSVDKDLCMRIAQCMIERNLSKAL* # ORIGINAL: g351.t1 original gene structure, not modified by PASA NODE_424_length_23964_cov_42.7367 AUGUSTUS gene 7623 8692 . - . ID=g351;Name=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS mRNA 7623 8692 . - . ID=g351.t1;Parent=g351;Name=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 8460 8692 . - . ID=g351.t1.exon1;Parent=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 8460 8692 . - 0 ID=cds.g351.t1;Parent=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 8016 8345 . - . ID=g351.t1.exon2;Parent=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 8016 8345 . - 1 ID=cds.g351.t1;Parent=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 7623 7902 . - . ID=g351.t1.exon3;Parent=g351.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 7623 7902 . - 1 ID=cds.g351.t1;Parent=g351.t1 #PROT g351.t1 g351 MDGPKAFLCDGKLAFVGCGSMGSAILSGLLAETLLDRESIVATVRSVESASALQEKFHISVQTDNVMACKSASAVVLGVKPYMVEAFARESGITDALVGKLLISICSGVSLQRLEELVPGARVVRAMSNTPTRVRQGATVVAGGSTATPGDVAFATGLFSPLGLCLTLPETHFDTVTALSGSGPAFVMLFIESLADGATRMGMPRDVALRLAAQTVVGAGSLVLGTREHPAVLRDAVTTPGGCTIAGLLRLEDGGVRGHIARAVEEATIKASTLGSTQKK* # PASA_UPDATE: g356.t1, single gene model update, valid-1, status:[pasa:asmbl_7143,status:3], valid-1 NODE_424_length_23964_cov_42.7367 . gene 20381 23536 . + . ID=g356;Name=g356.t1 NODE_424_length_23964_cov_42.7367 . mRNA 20381 23536 . + . ID=g356.t1;Parent=g356;Name=g356.t1 NODE_424_length_23964_cov_42.7367 . five_prime_UTR 20381 20499 . + . ID=g356.t1.utr5p1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 20381 20524 . + . ID=g356.t1.exon1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 20500 20524 . + 0 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 20652 20713 . + . ID=g356.t1.exon2;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 20652 20713 . + 2 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 20858 21068 . + . ID=g356.t1.exon3;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 20858 21068 . + 0 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 21338 21645 . + . ID=g356.t1.exon4;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 21338 21645 . + 2 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 21757 22039 . + . ID=g356.t1.exon5;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 21757 22039 . + 0 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 22140 22648 . + . ID=g356.t1.exon6;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 22140 22648 . + 2 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 22821 22952 . + . ID=g356.t1.exon7;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 22821 22952 . + 0 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . exon 23075 23536 . + . ID=g356.t1.exon8;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . CDS 23075 23215 . + 0 ID=cds.g356.t1;Parent=g356.t1 NODE_424_length_23964_cov_42.7367 . three_prime_UTR 23216 23536 . + . ID=g356.t1.utr3p1;Parent=g356.t1 #PROT g356.t1 g356 MQQPVIVLNQTVKRESGRKVQLSNIASARAVADVIRTCLGPRAMLKMLMDPMGGIVMTNDGNAILREIDVSHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLTVAEPFLERQMHPTVIVSAYAQALDDATTLIEKHISSPVDTNDDAAMLNIIKSCLGTKFMKRWSDLACKIALAAVRTVAIEENGRREIDIKRYAKVEKIPGGEIEESEVLRGVMINKDVTHAKMRRRIENPRIMLLDCPLEYKKGESQTNLEVTKEGDWQHILKLEEEFIEQMCNDIIALKPDLVITEKGVSDLAQHYFVKHNITALRRVRKTDNNRIGRSCGATIVNRTDELKESDIGTGAGLFEVKKIGDEYFAFITECKDPKACTILLRGASKDVLMEVERNLQDAMNVARNVLVNPRLVPGGGATEMALSQLLLEKAKGIEGIRQWPYKAVATALEVIPRTLIQNCGANVIRTLTALRAKHATAGNITWGIDGDQGVLADMKDLGIWEPVSVKVQTIKTAIETAVMILRIDDIVSGLKREKEQPQAAQGAPEGAEQPEGADGHEGHDH* # PASA_UPDATE: g349.t1, single gene model update, valid-1, status:[pasa:asmbl_7140,status:3], valid-1 NODE_424_length_23964_cov_42.7367 . gene 102 1414 . + . ID=g349;Name=g349.t1 NODE_424_length_23964_cov_42.7367 . mRNA 102 1414 . + . ID=g349.t1;Parent=g349;Name=g349.t1 NODE_424_length_23964_cov_42.7367 . five_prime_UTR 102 175 . + . ID=g349.t1.utr5p1;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . exon 102 334 . + . ID=g349.t1.exon1;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . CDS 176 334 . + 0 ID=cds.g349.t1;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . exon 436 659 . + . ID=g349.t1.exon2;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . CDS 436 659 . + 0 ID=cds.g349.t1;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . exon 876 1414 . + . ID=g349.t1.exon3;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . CDS 876 975 . + 1 ID=cds.g349.t1;Parent=g349.t1 NODE_424_length_23964_cov_42.7367 . three_prime_UTR 976 1414 . + . ID=g349.t1.utr3p1;Parent=g349.t1 #PROT g349.t1 g349 MIDPEDTARLNLKSQTAEEAYAEPANFLEIDVLNPEVHGIGRNRYTDYEIRMRTNLPIFKIKSCSVRRRYSDFEWLKAELERDSKILVPTLPGKAILKQINPLKKDDGIFEDEFIEDRRKLLEGFINKIAGHPLAQSERCLHMFLQEPTINREYTPGKVR* # ORIGINAL: g354.t1 original gene structure, not modified by PASA NODE_424_length_23964_cov_42.7367 AUGUSTUS gene 14775 16425 . + . ID=g354;Name=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS mRNA 14775 16425 . + . ID=g354.t1;Parent=g354;Name=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 14775 14877 . + . ID=g354.t1.exon1;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 14775 14877 . + 0 ID=cds.g354.t1;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 15632 15670 . + . ID=g354.t1.exon2;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 15632 15670 . + 2 ID=cds.g354.t1;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 15818 15899 . + . ID=g354.t1.exon3;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 15818 15899 . + 2 ID=cds.g354.t1;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 16016 16098 . + . ID=g354.t1.exon4;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 16016 16098 . + 1 ID=cds.g354.t1;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS exon 16178 16425 . + . ID=g354.t1.exon5;Parent=g354.t1 NODE_424_length_23964_cov_42.7367 AUGUSTUS CDS 16178 16425 . + 2 ID=cds.g354.t1;Parent=g354.t1 #PROT g354.t1 g354 MVNGRLADYDVATTQTHQLFGHVFYENYITRDANYPAAERFDYPVSTDIRDLITLDDVAEELDYGPNGGLIYCMEFLMENTDWLQEEIGTLPEDSYLIIDCPGQIELYNHCDMMRRLVDLLQQWDYRVCAVYMVDAQFIADTPKYFAGVLSAMSAMIQLEVPHVNVMSKMDTLGARGRKGDMET* # ORIGINAL: g3447.t1 original gene structure, not modified by PASA NODE_5040_length_1059_cov_29.1087 AUGUSTUS gene 2 916 . + . ID=g3447;Name=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS mRNA 2 916 . + . ID=g3447.t1;Parent=g3447;Name=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS exon 2 109 . + . ID=g3447.t1.exon1;Parent=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS CDS 2 109 . + 0 ID=cds.g3447.t1;Parent=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS exon 351 455 . + . ID=g3447.t1.exon2;Parent=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS CDS 351 455 . + 0 ID=cds.g3447.t1;Parent=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS exon 602 916 . + . ID=g3447.t1.exon3;Parent=g3447.t1 NODE_5040_length_1059_cov_29.1087 AUGUSTUS CDS 602 916 . + 0 ID=cds.g3447.t1;Parent=g3447.t1 #PROT g3447.t1 g3447 QQQQQQQQQQQQQQQQQQQQQQQQQKQQGPIQGEGEVRLDDLQLLEVAGRGTGGVVHKARHIPTGRMIALKVIPLDVADHVRKQILLELRTLYTALCPHIVRFHGAFFSEGSISIALEYMDAGSLSQLALGVPVPEPVLARIAQHVLLGLVYLHKDRHLMHRDIKPSNLLINREGM # PASA_UPDATE: g8588.t1, single gene model update, valid-1, status:[pasa:asmbl_8659,status:12], valid-1 NODE_644_length_19696_cov_40.5122 . gene 16785 19385 . - . ID=g8588;Name=g8588.t1 NODE_644_length_19696_cov_40.5122 . mRNA 16785 19385 . - . ID=g8588.t1;Parent=g8588;Name=g8588.t1 NODE_644_length_19696_cov_40.5122 . five_prime_UTR 19371 19385 . - . ID=g8588.t1.utr5p1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . exon 19211 19385 . - . ID=g8588.t1.exon1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . CDS 19211 19370 . - 0 ID=cds.g8588.t1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . exon 18706 18962 . - . ID=g8588.t1.exon2;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . CDS 18706 18962 . - 2 ID=cds.g8588.t1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . exon 18344 18422 . - . ID=g8588.t1.exon3;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . CDS 18344 18422 . - 0 ID=cds.g8588.t1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . exon 17793 18170 . - . ID=g8588.t1.exon4;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . CDS 17793 18170 . - 2 ID=cds.g8588.t1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . exon 16785 17553 . - . ID=g8588.t1.exon5;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . CDS 17243 17553 . - 2 ID=cds.g8588.t1;Parent=g8588.t1 NODE_644_length_19696_cov_40.5122 . three_prime_UTR 16785 17242 . - . ID=g8588.t1.utr3p1;Parent=g8588.t1 #PROT g8588.t1 g8588 MTLEAGGDDLPAHPVRSILHLIFHDEKDQRMERDNWQYWRSQNLGPSVRAFDCDHNSASGVTDFNEIAFNAVEFLWLPSVGAKVAVRLNCLSTDFSSQKGVKGMPLRIQVDTYEDTATPYEESVPVHRAYCQVKVFRDKGAERKNKDEAKGVEKRMLKIIKQQELKFGGNSYAPSPFSPPQTFTRLTPTSLAGPKPGILDDLLTATAAGHEHPGGTAQASAHPSAPSSPFGVFANGISAHNVPHTNAPDATDFRKRARDGDYGDEEDESVEAALAVAPIPLRKVKRIRNDPVVTIYVRKDSEKHYNALFLDRFTASNLKEKLAAKYGFPDVSVSRVLRRTRKGIVANFDDGMVEQLRDEDDFVVSVEKDDEGDTVQQQQGGAALSVFVLAPGDS* # ORIGINAL: g8586.t1 original gene structure, not modified by PASA NODE_644_length_19696_cov_40.5122 AUGUSTUS gene 8431 10075 . - . ID=g8586;Name=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS mRNA 8431 10075 . - . ID=g8586.t1;Parent=g8586;Name=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 9947 10075 . - . ID=g8586.t1.exon1;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 9947 10075 . - 0 ID=cds.g8586.t1;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 9167 9697 . - . ID=g8586.t1.exon2;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 9167 9697 . - 0 ID=cds.g8586.t1;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 8782 8887 . - . ID=g8586.t1.exon3;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 8782 8887 . - 0 ID=cds.g8586.t1;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 8431 8504 . - . ID=g8586.t1.exon4;Parent=g8586.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 8431 8504 . - 2 ID=cds.g8586.t1;Parent=g8586.t1 #PROT g8586.t1 g8586 MARHARTHLLLAFVLLASLFVAAHAARDEDDAFDEDEVVTSGEGFLSASEKYIGKAGFFHAFVAAFSVILVSEIGDKTFFIAAIMAMTHPRKVIFLGAISALALMTALSAALGFATTIIPRVYTYYASTALFALFGLKMLREGLAMSHDEGQEELEEVTMELRQKEEELVDVEAGGRAALSKSFLFAFVSPIMLQAFTLTFLAEWGDRSQLTTIILGAREDPWGVTAGGIIGHAICTGLAVLGGRLLAQRISVRTVTLVGAVVFLVFALVGVLSDPNAS* # PASA_UPDATE: g8587.t1, single gene model update, valid-1, status:[pasa:asmbl_8657,status:12], valid-1 NODE_644_length_19696_cov_40.5122 . gene 10928 16418 . + . ID=g8587;Name=g8587.t1 NODE_644_length_19696_cov_40.5122 . mRNA 10928 16418 . + . ID=g8587.t1;Parent=g8587;Name=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 10928 14854 . + . ID=g8587.t1.exon1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 10928 14854 . + 0 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 14975 15048 . + . ID=g8587.t1.exon2;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 14975 15048 . + 0 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 15164 15199 . + . ID=g8587.t1.exon3;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 15164 15199 . + 1 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 15451 15498 . + . ID=g8587.t1.exon4;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 15451 15498 . + 1 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 15662 15741 . + . ID=g8587.t1.exon5;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 15662 15741 . + 1 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 15980 16120 . + . ID=g8587.t1.exon6;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 15980 16120 . + 2 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . exon 16242 16418 . + . ID=g8587.t1.exon7;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . CDS 16242 16297 . + 2 ID=cds.g8587.t1;Parent=g8587.t1 NODE_644_length_19696_cov_40.5122 . three_prime_UTR 16298 16418 . + . ID=g8587.t1.utr3p1;Parent=g8587.t1 #PROT g8587.t1 g8587 MADGASRSAPTSRPSSRPSSRGGTRTVKHTPATVPRTNSASGPSDADFEGVRMHMSFTDDNIAEVEEARSNHAVVAKEASPVVSDTEHELNVSRGGEGAKDAAAEGEDGEGGVQYAEDNLEDLRVSGQQLEDAERVLEGLRAAGLSETNPTYISLREKVDMLKALQQSFRERMELVIQRARGIDAGTGPDGDAAEDAGDADENGGDESEEGDEQSDAAAMEADFAEQAARLEQLRRQRDLLIALQQQQDQLRALEEKRARLVELQARLAQLSALEAASAARNVIEAGDEREDEGDEIEEDEDASEGEAAAVPDTRQFVQVRDNGDDTESDDDDGPDDRNNGAGAEARDDSEDDDDDEFDMNDEVAERIRVEQADATAEHTFTRMRNMLDQLKEQKATIERLRASMADTDTAAPSATSPSAQQHLQLKPPAAAQSPSIGRALSVSVRALVPQSPAVQTARSPIQTARSPIQTARSPALAPAAVRSSAAPQPKSPVAQPARPDLAMSSAQMESNLDALLMRVKTLRSNIEHEFGQTNDAQNGEDDEEEDEASAVRAPLDESVAPDDPSLDRWEADYRHKLRDAHAPRGGSASASASASAPGASEKQRQRQMRALEELSKQLAQLRDARNRAEQLNALLNASEAGADPSAAVRATGASSGPSSSSAAAAAAAVLSARDRRRTTNGPLDMAVVEMDSDRTLSMETHPSRRRRSNPTPRVRVQEPPVVQKAASRNAPLSAPVPAAQARVAPPKASARSAPAPSASASAAVPRRPAYREDAEGELHQSRTDLQNLRLAVAYSETLPSSERKRFFRDFFRHFKQSGAVEESLARPSRNTDSASSRGRVQGERGDGHFRQTSTSSVPGSAPQGRWQEADALSFETMKESIYKEVAVFIARNESRPHYLVQLFRQLQMVDTDYLRQRALFAVQDVCSGVLSDRPGSSGGRRSATPDNEPYDYWEEVGESASSHSTASDVPSESEEEDDGHDDDEEDDDDDGGDDDEDDQDDEDDEPFERNEGRDAYRHRIVAARRAAGDHNPLSVVGRGLTNGLTVVGRAIPTAGLAATTAHPTRTSSATSREALWGSVAADSDSDDDEEDAEEGEGDDDDDDDDDDDDDDDDDGDDDDTEEREDDAAPRHIRGAAADASAATRARRSVVDAVSLFMVELSRQSPSERFSTAVSDYIARMTVNMYVQECASEGIEAPPPERLADALCTAVLPRYEGALVRERAFGLVREIDSLLSFETDRAAAVKGVMSASESRAASEYGRDRPSASVSDAESLLAEIEKFRQRTANTGRSAPPTATYAWGNSDGAAESDPSSGQQSEDDILDMRPSGNKKKSAPGRRQSEQYDSDDEGDDSDDPDVQKQRAKNATAANGSDITDYFRALFNGGSDGGLAGDEDEGAEFGAAGDSAILGEQTFEMLLNSFLDRIGGRPDSLAGAGGRARLYEVTDDGEAQRH* # ORIGINAL: g8584.t1 original gene structure, not modified by PASA NODE_644_length_19696_cov_40.5122 AUGUSTUS gene 637 3427 . + . ID=g8584;Name=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS mRNA 637 3427 . + . ID=g8584.t1;Parent=g8584;Name=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 637 707 . + . ID=g8584.t1.exon1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 637 707 . + 0 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 910 1113 . + . ID=g8584.t1.exon2;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 910 1113 . + 1 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 1270 1408 . + . ID=g8584.t1.exon3;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 1270 1408 . + 1 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 1590 1612 . + . ID=g8584.t1.exon4;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 1590 1612 . + 0 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 1889 2001 . + . ID=g8584.t1.exon5;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 1889 2001 . + 1 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 2199 2280 . + . ID=g8584.t1.exon6;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 2199 2280 . + 2 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 2553 2665 . + . ID=g8584.t1.exon7;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 2553 2665 . + 1 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 2843 3009 . + . ID=g8584.t1.exon8;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 2843 3009 . + 2 ID=cds.g8584.t1;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS exon 3185 3427 . + . ID=g8584.t1.exon9;Parent=g8584.t1 NODE_644_length_19696_cov_40.5122 AUGUSTUS CDS 3185 3427 . + 0 ID=cds.g8584.t1;Parent=g8584.t1 #PROT g8584.t1 g8584 MGYRSSSADPAIASKYKIKRLIGRGSNSKVVEVMEVATGNHYAAKIVPNESGAVCRYAAAEADVLKRLSHPNIVRLHEVIETRDSFFIIMELVTGGELLDHIFERRLFSERDASSLIRSVLKALDYLHAQGCVHRDLKPENLLFESRADDAKILIADFGLAKLKKHLEDKLVMTTVCGTPTYCAPEVLGRLPCGYGKAVDIWSLGVITYLLLSGRPAFQDDFGNILFDNIMSGTYDFKGDEWMGISCEAKDFISRLLRVDPDARLSAKEALLHPWISGGMCVSRRDIYGQIRDKLERSLRGRWMRSINTVLAIERMRRRSSHTPNASPRMTNPGMSAIGRAQSAECLDDPQRMSESPMSRGRSMDMLTSGPSDCAAAGRRALAV* # PASA_UPDATE: g8585.t1, single gene model update, valid-1, status:[pasa:asmbl_8658,status:12], valid-1 NODE_644_length_19696_cov_40.5122 . gene 4636 5923 . - . ID=g8585;Name=g8585.t1 NODE_644_length_19696_cov_40.5122 . mRNA 4636 5923 . - . ID=g8585.t1;Parent=g8585;Name=g8585.t1 NODE_644_length_19696_cov_40.5122 . five_prime_UTR 5866 5923 . - . ID=g8585.t1.utr5p1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . exon 5788 5923 . - . ID=g8585.t1.exon1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . CDS 5788 5865 . - 0 ID=cds.g8585.t1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . exon 5369 5455 . - . ID=g8585.t1.exon2;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . CDS 5369 5455 . - 0 ID=cds.g8585.t1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . exon 4998 5090 . - . ID=g8585.t1.exon3;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . CDS 4998 5090 . - 0 ID=cds.g8585.t1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . exon 4636 4837 . - . ID=g8585.t1.exon4;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . CDS 4682 4837 . - 0 ID=cds.g8585.t1;Parent=g8585.t1 NODE_644_length_19696_cov_40.5122 . three_prime_UTR 4636 4681 . - . ID=g8585.t1.utr3p1;Parent=g8585.t1 #PROT g8585.t1 g8585 MAEEIKWVVRVPTAEVQGTNFEDNVALYKIETTTNDGRSFTILKRYSLIHEFREKVVEFYKAKHGLLAANVPQLPKKEFKILKDHSTANFVEERRSEIDSFFRRTIELPHIFECDFVFEFLTGLDRHGKVILSSGRA* # PASA_UPDATE: g4598.t1, single gene model update, valid-1, status:[pasa:asmbl_9311,status:3], valid-1 NODE_772_length_17897_cov_42.9354 . gene 7570 10897 . + . ID=g4598;Name=g4598.t1 NODE_772_length_17897_cov_42.9354 . mRNA 7570 10897 . + . ID=g4598.t1;Parent=g4598;Name=g4598.t1 NODE_772_length_17897_cov_42.9354 . five_prime_UTR 7570 7653 . + . ID=g4598.t1.utr5p1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . exon 7570 8794 . + . ID=g4598.t1.exon1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . CDS 7654 8794 . + 0 ID=cds.g4598.t1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . exon 8916 9086 . + . ID=g4598.t1.exon2;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . CDS 8916 9086 . + 2 ID=cds.g4598.t1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . exon 9272 9911 . + . ID=g4598.t1.exon3;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . CDS 9272 9911 . + 2 ID=cds.g4598.t1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . exon 10109 10383 . + . ID=g4598.t1.exon4;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . CDS 10109 10383 . + 1 ID=cds.g4598.t1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . exon 10499 10897 . + . ID=g4598.t1.exon5;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . CDS 10499 10704 . + 2 ID=cds.g4598.t1;Parent=g4598.t1 NODE_772_length_17897_cov_42.9354 . three_prime_UTR 10705 10897 . + . ID=g4598.t1.utr3p1;Parent=g4598.t1 #PROT g4598.t1 g4598 MEDPSLPKAADIDDFLSRVDTVEALIRGLKEGSIDPSRVPDSVDDVLDVSAVARGDGGVVRVTASKTVVTEENTRSSAQGGGGLRTGQTASVKNDAPSPMTTESPNTKKKGPTNYAAWERFAADDEDAQGALSVERVVNSSSDPVDGRNGTADICETDCGVTPVIDGPVAGDAFMRQLEEDAAGRRARKDRREAEAAEFKAAGNIAFKAGRFCEAVERYSDAIALMPYSTVLLTNRAQAYHKLGEFRSARSDCTRALDIDPKCVKALVRRGLAFHCEGCFSDALNDFAAAVKLDPSSEKDVRAYVDATEHSQMLAEADLAAHAALRTVETGGTVDQDAVTIVSGAIRRMLAAHTTAGEVVRAAVETKSALLRADVDVVAGGRLRAVFRVSGGLGLLGTCPHTNWCVTGAAASEMASNESRAVVAAVLDLLDAACTDDAANQAGLVDTAGFSAAICVLISDRSPRVVERGLQLLSTITRSPRARASLLRGSTMLLQRVLDRVVSPGDPLPSALFALSHMCLESSARMECARMYDTLVPPLIARPVGGCSAVVVGATLAALGNMAMDPDVRTKFCHSKCVEKVLLIATKVASQATGPLLSEAAPSLLALMVNLSLDEGPLALFGEADNVALVVRLAEVGDAVTRQRAATLLSRLAKTESVASALSNDAGLGLILRLCADEDLGIVAAGVRCLAASTQRNPPAWEAVSRLGGANVLVRLLDAVQGHLADAILANAALALANCAQHDVICASLTTSDCVDRLVVLAKREPGAVQENAAVALARLARGHPTHLDRLRTLGAIEILHTRLSQTRKP* # ORIGINAL: g4597.t1 original gene structure, not modified by PASA NODE_772_length_17897_cov_42.9354 AUGUSTUS gene 5842 7295 . - . ID=g4597;Name=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS mRNA 5842 7295 . - . ID=g4597.t1;Parent=g4597;Name=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 7278 7295 . - . ID=g4597.t1.exon1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 7278 7295 . - 0 ID=cds.g4597.t1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 7028 7170 . - . ID=g4597.t1.exon2;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 7028 7170 . - 0 ID=cds.g4597.t1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 6806 6923 . - . ID=g4597.t1.exon3;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 6806 6923 . - 1 ID=cds.g4597.t1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 6569 6717 . - . ID=g4597.t1.exon4;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 6569 6717 . - 0 ID=cds.g4597.t1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 6348 6446 . - . ID=g4597.t1.exon5;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 6348 6446 . - 1 ID=cds.g4597.t1;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 5842 6043 . - . ID=g4597.t1.exon6;Parent=g4597.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 5842 6043 . - 1 ID=cds.g4597.t1;Parent=g4597.t1 #PROT g4597.t1 g4597 MLDTAQVEKAVRALVAHIKKRDEESNDLIEDDHVIWLSLGMKNMPQVKAKQHRIKLPHSLLSGRDVDTCLFTKDPQKEYKEKLVAGGITKISKVIGVSKLRANYKQFEAKRKLCSSYDLFLADDRIIPLLPKLLGKTFFDKKKQPIPVNLTRKNLRLELSNAMSSTYLNLGTGTSCAIKVASTAHSVDEIVANINHAAAQVAEIIPKKWKNVQSFHIKTSDSIALPIFNSLPEAPSRITVDQ* # PASA_UPDATE: g4596.t1, single gene model update, valid-1, status:[pasa:asmbl_9308,status:12], valid-1 NODE_772_length_17897_cov_42.9354 . gene 3668 5688 . + . ID=g4596;Name=g4596.t1 NODE_772_length_17897_cov_42.9354 . mRNA 3668 5688 . + . ID=g4596.t1;Parent=g4596;Name=g4596.t1 NODE_772_length_17897_cov_42.9354 . exon 3668 3994 . + . ID=g4596.t1.exon1;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . CDS 3668 3994 . + 0 ID=cds.g4596.t1;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . exon 4661 4704 . + . ID=g4596.t1.exon2;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . CDS 4661 4704 . + 0 ID=cds.g4596.t1;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . exon 4844 4985 . + . ID=g4596.t1.exon3;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . CDS 4844 4985 . + 1 ID=cds.g4596.t1;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . exon 5361 5688 . + . ID=g4596.t1.exon4;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . CDS 5361 5576 . + 0 ID=cds.g4596.t1;Parent=g4596.t1 NODE_772_length_17897_cov_42.9354 . three_prime_UTR 5577 5688 . + . ID=g4596.t1.utr3p1;Parent=g4596.t1 #PROT g4596.t1 g4596 MFYCLTGLPIQGPSRLAIRAQAQSPQRAPIQTGGDSPSQQRQQVRDVSQPKAERARKVLRDMEADTPTPPQSTCSDTRGDAHVSLVHLSQIDQRTALAAHAQQQTSLDQQKRSFPFVLGADLLRADSLKMVATKKTKKTQEGINTRLALVMKSGKYTLGYKSTLKTLRQGKSKLIIIAGNCPPLRKSEIEYYAMLGKTGVHHYTGNNIDLGTACGKYFRVCTLSITDPGDSDIIRSIPGEGQ* # ORIGINAL: g4599.t1 original gene structure, not modified by PASA NODE_772_length_17897_cov_42.9354 AUGUSTUS gene 11340 15860 . - . ID=g4599;Name=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS mRNA 11340 15860 . - . ID=g4599.t1;Parent=g4599;Name=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 15727 15860 . - . ID=g4599.t1.exon1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 15727 15860 . - 0 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 14736 15572 . - . ID=g4599.t1.exon2;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 14736 15572 . - 1 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 13600 14586 . - . ID=g4599.t1.exon3;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 13600 14586 . - 1 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 12930 13443 . - . ID=g4599.t1.exon4;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 12930 13443 . - 1 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 12583 12749 . - . ID=g4599.t1.exon5;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 12583 12749 . - 0 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 12285 12434 . - . ID=g4599.t1.exon6;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 12285 12434 . - 1 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 12059 12135 . - . ID=g4599.t1.exon7;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 12059 12135 . - 1 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 11607 11695 . - . ID=g4599.t1.exon8;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 11607 11695 . - 2 ID=cds.g4599.t1;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 11340 11450 . - . ID=g4599.t1.exon9;Parent=g4599.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 11340 11450 . - 0 ID=cds.g4599.t1;Parent=g4599.t1 #PROT g4599.t1 g4599 MPSNSAMAESASAQSPRPLYVAESLPALKKFSEYKRDNPNTTLASRLERAARMFDAVLAARRDCDEERLFVLSLQFTQYVLDLRRSLPTDPSADVLSRVGVLHGRVAEVMGLAETAKASLQRRYAEYKGSANTPATGGDCSTRLVPANKQSGGEEAGAMTVQPRQLPPKADPTPVDAAILDHFFGTASSTECLGNASVEALPNTPGPSTSAAAAAHPMPGVSSTTRHVAGYALITPKELFDAFEAARAEGGPEWQARLVIVDARDGPAWSRGQIDWPRRVSLPSPSLVRPLAAADIGPLLDDPSRAAFAQRSKARTIVLYDQSSTMASLQDDPNHPLFVLHDALFKFEFTASLSQSPLVLDGGYAAFSTLFPSSCHVPAAVRSLPTPSSGDLNRPSYPSVLRSRQPRSTSESSAVPILHSCVPLPPLPPDAIAAVPQAQPMDCPPSDARMSCAGAASDHPDGIAGGAALPLTGMSAKDNPAHPIAAADATRSIKPTATPFLPIGMPSRVIRRAPGASVEDNRRNSTVRNGDDHDNDDEDARRLLRPSLRPLPSAALLHRQCSLGGERVALPAAAVRPAQQLGHRHILPSRTLPGALPLSPTTDSGRSSLSSTVRDPIRQPPVADRSRKPPSSSTISALDIPAYDRSLKPQPRRDLVFLYGDRRLGLVGLRNLGNTCYMNSMVQCLSHTVPLTGYFMSGKYRTDLNRVNPMGLQGRLADEYGRLVLQLWGSDRRFVAPAALKDLVAQFASQFDGADQHDSQEFLAIILDGLHEDLNAARIPGIAPPPLPEIPDDQWDAMSDVDRARFAWERHRRLNRSFVVDLFEGQFRTCLQCRSCGYESVTFTPFMYLSLPIPKNGRPTLQACLSLFTEPEVVSGADQWYCPKCKQHREAVNRLELWALPRLLMIHLKRFAFDGPWRSKINLAVDFPVSNLDMSPFVKGPLRAKPEYNLYAVSVDTAFCRNAFDGKWYNFDDSVVGEAGEAELQGRNAYVLFYSCGDFEDEKRDMFSRPSSAAGGDHRLL* # ORIGINAL: g4594.t1 original gene structure, not modified by PASA NODE_772_length_17897_cov_42.9354 AUGUSTUS gene 85 712 . + . ID=g4594;Name=g4594.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS mRNA 85 712 . + . ID=g4594.t1;Parent=g4594;Name=g4594.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 85 246 . + . ID=g4594.t1.exon1;Parent=g4594.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 85 246 . + 2 ID=cds.g4594.t1;Parent=g4594.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 417 712 . + . ID=g4594.t1.exon2;Parent=g4594.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 417 712 . + 2 ID=cds.g4594.t1;Parent=g4594.t1 #PROT g4594.t1 g4594 PCVTKVSYSTCSIHAEENEDVVLRALASSEGARFALAQALPQWQSRGLSDRDGGALCVRASVERDHTNGFFVALFVRKPGPLGEDPLSCRVTPNGHEPRLPVSGHNDVSAGHPLPSMQPLTSGVRLRGTEGSSNANKKRKGPRRMKQPVTR* # PASA_UPDATE: g4595.t1, single gene model update, valid-1, status:[pasa:asmbl_9307,status:3], valid-1 NODE_772_length_17897_cov_42.9354 . gene 876 3992 . - . ID=g4595;Name=g4595.t1 NODE_772_length_17897_cov_42.9354 . mRNA 876 3992 . - . ID=g4595.t1;Parent=g4595;Name=g4595.t1 NODE_772_length_17897_cov_42.9354 . five_prime_UTR 3516 3992 . - . ID=g4595.t1.utr5p1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . five_prime_UTR 3277 3304 . - . ID=g4595.t1.utr5p2;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 3516 3992 . - . ID=g4595.t1.exon1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 3130 3304 . - . ID=g4595.t1.exon2;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 3130 3276 . - 0 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 2831 2985 . - . ID=g4595.t1.exon3;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 2831 2985 . - 0 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 2468 2596 . - . ID=g4595.t1.exon4;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 2468 2596 . - 1 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 2084 2213 . - . ID=g4595.t1.exon5;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 2084 2213 . - 1 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 1620 1773 . - . ID=g4595.t1.exon6;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 1620 1773 . - 0 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . exon 876 1371 . - . ID=g4595.t1.exon7;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . CDS 1181 1371 . - 2 ID=cds.g4595.t1;Parent=g4595.t1 NODE_772_length_17897_cov_42.9354 . three_prime_UTR 876 1180 . - . ID=g4595.t1.utr3p1;Parent=g4595.t1 #PROT g4595.t1 g4595 MRIIYSEGYSQKDRVEFRPLVFQNILKSMQLMTAAMQKLNISYANPANADLVKLIEALDLTHTASIEDDVKAAIKVLWADAGLQECYDRRREYQLSDSTKYYLDACERIFASDFMPSVEDVLRVRVPTTGIVESKFTISNVIFRMVDVGGQRSERRKWIHCFEGVTSIIFIVALSEYDQVLYEDENQNRMQESRALFDNIVNYKWFEKTSIILFLNKTDLLEDKIKKSDLAKYFPAFEGKPGDLEAAKQFILDLFVVLNRNASKPLYFHFTCATDTENIRFVFLSVKDTILQSNLRDYGLV* # ORIGINAL: g4600.t1 original gene structure, not modified by PASA NODE_772_length_17897_cov_42.9354 AUGUSTUS gene 16384 17799 . - . ID=g4600;Name=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS mRNA 16384 17799 . - . ID=g4600.t1;Parent=g4600;Name=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 17686 17799 . - . ID=g4600.t1.exon1;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 17686 17799 . - 0 ID=cds.g4600.t1;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 17174 17314 . - . ID=g4600.t1.exon2;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 17174 17314 . - 0 ID=cds.g4600.t1;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 17036 17063 . - . ID=g4600.t1.exon3;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 17036 17063 . - 0 ID=cds.g4600.t1;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 16699 16883 . - . ID=g4600.t1.exon4;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 16699 16883 . - 2 ID=cds.g4600.t1;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS exon 16384 16572 . - . ID=g4600.t1.exon5;Parent=g4600.t1 NODE_772_length_17897_cov_42.9354 AUGUSTUS CDS 16384 16572 . - 0 ID=cds.g4600.t1;Parent=g4600.t1 #PROT g4600.t1 g4600 MAQQCETEVNLQRLICRSEELASRGAGLSSADVGRFRAVAHPELLPSEYSVGGTMLTNASLKEKEMQQRAMQRKVNRLRAELLGEAKRIESPREANGSLRSLAEMYRAYRDGDSYEALLTHHRGMHENLAENMVQMALHLKHNTLMSSQIIKDDVKTLDDSHKVAEHNVKRLREEGSRLKEIAAAWSSWWIYGVLAVVSLVFVWTVLFIRLFPSGMSG* # PASA_UPDATE: g4302.t1, single gene model update, valid-1, status:[pasa:asmbl_6584,status:12], valid-1 NODE_3807_length_2711_cov_35.9059 . gene 81 2393 . - . ID=g4302;Name=g4302.t1 NODE_3807_length_2711_cov_35.9059 . mRNA 81 2393 . - . ID=g4302.t1;Parent=g4302;Name=g4302.t1 NODE_3807_length_2711_cov_35.9059 . five_prime_UTR 2310 2393 . - . ID=g4302.t1.utr5p1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . five_prime_UTR 2000 2026 . - . ID=g4302.t1.utr5p2;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 2310 2393 . - . ID=g4302.t1.exon1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 1974 2026 . - . ID=g4302.t1.exon2;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . CDS 1974 1999 . - 0 ID=cds.g4302.t1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 1499 1666 . - . ID=g4302.t1.exon3;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . CDS 1499 1666 . - 1 ID=cds.g4302.t1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 973 1161 . - . ID=g4302.t1.exon4;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . CDS 973 1161 . - 1 ID=cds.g4302.t1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 671 800 . - . ID=g4302.t1.exon5;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . CDS 671 800 . - 1 ID=cds.g4302.t1;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . exon 81 200 . - . ID=g4302.t1.exon6;Parent=g4302.t1 NODE_3807_length_2711_cov_35.9059 . CDS 81 200 . - 0 ID=cds.g4302.t1;Parent=g4302.t1;3_prime_partial=true #PROT g4302.t1 g4302 MPSEPPIISGLKHRLLVFLWRQSKNAPVRDNALRMYFFLFEQYASLCMWKMQFIDETHLLIKYGSVDGITNRQNDTAVQAAFFVVYNIATTRIIAVYENTAEDLLRLYERFCDVLRVSAFDMPVSFVSVCSNNLHAREQLIKYQLTIRNARHGGRSHAIKRVLSVLPFSAQAFCESPYFDKSLFSYDEKIISPSDRPKPWCDNCVKFYGRE # ORIGINAL: g2418.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 14345 15337 . + . ID=g2418;Name=g2418.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 14345 15337 . + . ID=g2418.t1;Parent=g2418;Name=g2418.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 14345 15337 . + . ID=g2418.t1.exon1;Parent=g2418.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 14345 15337 . + 0 ID=cds.g2418.t1;Parent=g2418.t1 #PROT g2418.t1 g2418 MSGAAGGGHVDVVRFLHENRGEVSLYDAKYAAINNSRLEVIKFLHENQLIAYDDTAIAAWYDPVGEVVQWLYNTVGGDADTVMINAAGGGHLDVVRYAITIGGTEVISSVENGAMNGHLNVVKWLLESQPPDFDLLRRVKQLADSTAKHAVAIWACSILCTEIQLDRARGKQYDPKCHLHVENVDELCATPEYHLQVGAEGNVDDFCATPECHLQVGAEGNVDEFCATFKRYQKFRKELVDQEIVIDFGWRSRVVIPHEGDWLHKLMVVIRLPKLTEDVPTWWCRNVGHAIFKLIELRGGDSDWILPMAIGSIYDKPFLASQVTTAVTEK* # ORIGINAL: g2421.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 21581 22495 . + . ID=g2421;Name=g2421.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 21581 22495 . + . ID=g2421.t1;Parent=g2421;Name=g2421.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 21581 22495 . + . ID=g2421.t1.exon1;Parent=g2421.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 21581 22495 . + 0 ID=cds.g2421.t1;Parent=g2421.t1 #PROT g2421.t1 g2421 MAIHVLSWESLATFENLECKRAMQGSCSSWFNSSIVGYNDDGISVRACVQTPVVGTNGIVKQRDGRLGLSLCFKNVTLDWSVLEFKSAIDAFGGQIASKLRTGELGLAAVNADSKFFVGINDDSMVPTLGTSKTGKQKYYDVFNSDGQPVDDSEIRADGHISALISPVRLSLQYGYGKLVRATVEWECVQVQVVENPTPNMPVMRMKSVAMPAPLALPPPPPPPLPPVFIPTVHKLIITRKNQVDGVVGPTEKKFVVTLDDIRSIQLKKVTAQPKATVESTCFSGLITQAELEQHRQMLGTVSS* # ORIGINAL: g2414.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 5041 5550 . + . ID=g2414;Name=g2414.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 5041 5550 . + . ID=g2414.t1;Parent=g2414;Name=g2414.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 5041 5550 . + . ID=g2414.t1.exon1;Parent=g2414.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 5041 5550 . + 0 ID=cds.g2414.t1;Parent=g2414.t1 #PROT g2414.t1 g2414 MASLAPPSAMTEIDQAIEIAKQFETAASAEKVKETEAFLAKMKAFDKLSEASRVLVFYLVEEIQSVLADPALSKQQSIVLERYSEMLAGGESIKKHRVDYMHKLNGPIQPFCFVQKLFREKGIDLREVTPNNVTVFRMQQQQPTPSTQTMQPKRNTGGQWRREYFKPNY* # ORIGINAL: g2415.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 9351 10169 . + . ID=g2415;Name=g2415.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 9351 10169 . + . ID=g2415.t1;Parent=g2415;Name=g2415.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 9351 10169 . + . ID=g2415.t1.exon1;Parent=g2415.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 9351 10169 . + 0 ID=cds.g2415.t1;Parent=g2415.t1 #PROT g2415.t1 g2415 MDDIAQSKYHACCRVIVAAFSRIAAQIVPGANQHEVQTFAHTALAEELSRVYKKAAKCVSFPCSISCNSLLKNRCTVNSGQVFAEGDIVRVNAAVTIDDCMVGWGDTYSISGSVAQNMTEAVQFASTLEDTRIALLQKGKQLIPQLCDWKVNGNVVHACVMWLEQVGTRIPDGPPNIQCGTLDDADLYRRTAERRNLKSAAARRVLNCCPTPSNVYSAAAIIENIKNDNVSRLGLQGCIQAGVLTPVLPIATPAEMSKRVIYAERTVKHVPK* # ORIGINAL: g2417.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 12307 13449 . + . ID=g2417;Name=g2417.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 12307 13449 . + . ID=g2417.t1;Parent=g2417;Name=g2417.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 12307 13449 . + . ID=g2417.t1.exon1;Parent=g2417.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 12307 13449 . + 0 ID=cds.g2417.t1;Parent=g2417.t1 #PROT g2417.t1 g2417 MANEQEEDVCSVCLETLHGILATLVCKHVFHKRCLDKLLTAFACCPICREKIVDDWNDEPAVVTLTCLAELQSELVHVVTAIACSPDGQMIVSGTQDGRVLVYSWSNPVPTVLPAHDAAVTVVAWDPHNHMRFLTGGLDGQVCMWTDHKRTAHFYAKMSESPACWAGVVEPLPYEVRDLLWTESYIATYTSDRKLRFWTHRPTRFDKIYCAVKAGSGASASKNGARLVTLGRYHVRLWDIICTANTMYMTHLTVLRTYNCDPPRAIKMSDDGNSVALTDSMNRVETGRLPNDVIAFALDEYIVRFSHTEIKSSKYAWQPFGFQLAILETDTVRVYCQRTRTSRVCDHPNVKHFAWTNDGTRLITQDSDGCLRLHQSIKSQ* # ORIGINAL: g2416.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 11046 11675 . + . ID=g2416;Name=g2416.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 11046 11675 . + . ID=g2416.t1;Parent=g2416;Name=g2416.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 11046 11675 . + . ID=g2416.t1.exon1;Parent=g2416.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 11046 11675 . + 0 ID=cds.g2416.t1;Parent=g2416.t1 #PROT g2416.t1 g2416 MADDYNYLFKVVLVGDASTGKTNLMNVYTKSTFVVDSKATIGVEFATRTIKRDGVLIKLQVWDTAGQERYRAITHAYYRGAHAAIVVYDITSPKSFENVERWLQEIRTHARSDIAIVLVGNKSDLSYLRTILTEDGKAFAIREGLAFIETSALSNNQVSDVFEHILNALCTEDRMKCLAEREPEPNPMGNSYRIILDDTKPAEVKKSCC* # ORIGINAL: g2413.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 3918 4373 . - . ID=g2413;Name=g2413.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 3918 4373 . - . ID=g2413.t1;Parent=g2413;Name=g2413.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 3918 4373 . - . ID=g2413.t1.exon1;Parent=g2413.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 3918 4373 . - 0 ID=cds.g2413.t1;Parent=g2413.t1 #PROT g2413.t1 g2413 MKLAEGLLMRASLENSVKELRQQIIDNGKLQEGDVPQENIAGLFDKLDATYDELTQLVMQIEDTNVATKFSDTETLDQALIRRDMLTKKIAAFADIIEQCKIGGSRCSRNEIKFITTFSIPEKREVLERLKLERIKLNAQIQQINWQADLC* # ORIGINAL: g2419.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 17011 17385 . + . ID=g2419;Name=g2419.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 17011 17385 . + . ID=g2419.t1;Parent=g2419;Name=g2419.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 17011 17385 . + . ID=g2419.t1.exon1;Parent=g2419.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 17011 17385 . + 0 ID=cds.g2419.t1;Parent=g2419.t1 #PROT g2419.t1 g2419 MYAAYDSPAMHGELRPQHGNNKARKRVSGGKVRRTDIYRRSPPAVSILNDEDARFRTFFPAILEEVLRDIEDRFAPTANSSDPASDIEYWTGKYAHLEFEHETLGSLAIEFQNETVIYDGLGQR* # ORIGINAL: g2420.t1 original gene structure, not modified by PASA NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS gene 18573 21158 . - . ID=g2420;Name=g2420.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS mRNA 18573 21158 . - . ID=g2420.t1;Parent=g2420;Name=g2420.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS exon 18573 21158 . - . ID=g2420.t1.exon1;Parent=g2420.t1 NODE_457_length_23380_cov_43.0779_potentialcontaminant AUGUSTUS CDS 18573 21158 . - 0 ID=cds.g2420.t1;Parent=g2420.t1 #PROT g2420.t1 g2420 MMQVGGRASPPARRKSPPSHSAKRTKQPPQSPRQSHESPTHKSPKHKSSKSPHSSKSPHSSKSRQATTKLDTRRFALDGPLGTLFPNWIADNFGKYALEDVPPAINPDGTAMDPCNEDNAKSVRLRKYQEIIGEFLKPGSNFRDLLVYHGLGSGKTCTAINVFNVLFADNPDRWNVFILLKAALKDDPWMADLNKCLTNFGDQFVHITFVHYDSPTAERQFLDALANRKPDRSTLFIIDECHNFIGNVYSNVIKEKGKRAKIIYNALLDEKQKDVETRIVCLSGTPAINQPFELALLFNLLRPGKLPMSMHEFEKYFVHYEEVRVTEGAPAVKMPRLNPQYKNFFQRSILGLVSYYVGSTKDLFASHKVFTVDIEMPAYMNEVYDVFEAFEDTIEKRKKVYGSSKSVSTYRSYTRTACNFVFPHVNKLINGANRPRFGQFKISERDMESIESANIKIKEQKNIGRMTNMTLYSEAIQKFKDALTAHWDQMDQKDQQGGKTVAAIVKEWMAEAAARRIPEDSLRDEFLKHHTVAMAESALYNSMFICSPKMVQIVFYIIFSPGPVLVYSNYVDMEGLYIFKRYLERFGFASATESAQHPQHPPHPYMGYTEYHGRLDDEERNANKKMFNQPKNKLGESVKVILLSPSGSEGINMYNIRQVHILEPYWNEARISQVVARSIRRCSHKDLPMEERTVVVFRYKMTRKSNRMTTDEFVEKVAKRKQTLLDTFLLAMKESAFDCMLNRAHNFPLNPTYSCFRFDAKSVLDPSPAFRWDVDKDVIMSAGINAPGFNTVVANVYKVMVSSAQVPPTEGLMDPKTGVVYDVELHHVVGSVEMEPTLNYPMKNEDGYFALARFAAHHERS* # ORIGINAL: g1105.t1 original gene structure, not modified by PASA NODE_293_length_27840_cov_62.6637 AUGUSTUS gene 23715 24571 . - . ID=g1105;Name=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS mRNA 23715 24571 . - . ID=g1105.t1;Parent=g1105;Name=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 24430 24571 . - . ID=g1105.t1.exon1;Parent=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 24430 24571 . - 0 ID=cds.g1105.t1;Parent=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 24112 24224 . - . ID=g1105.t1.exon2;Parent=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 24112 24224 . - 2 ID=cds.g1105.t1;Parent=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 23715 23897 . - . ID=g1105.t1.exon3;Parent=g1105.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 23715 23897 . - 0 ID=cds.g1105.t1;Parent=g1105.t1 #PROT g1105.t1 g1105 MFRRPVVIVAEPVRPAPVVVVNPHPAPAVVIATPPPAVVVAPHRHRHDLPGPPRDSEACLSYSPPVRSPAWEMRPVAVGCEERVVVHLMAAGQNLNYTHSPHAGAPVVVCGGLAARFAPPSFPAATCASVGVCVEAAHRQNHPSG* # ORIGINAL: g1100.t1 original gene structure, not modified by PASA NODE_293_length_27840_cov_62.6637 AUGUSTUS gene 2325 6544 . + . ID=g1100;Name=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS mRNA 2325 6544 . + . ID=g1100.t1;Parent=g1100;Name=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 2325 2353 . + . ID=g1100.t1.exon1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 2325 2353 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 2554 3142 . + . ID=g1100.t1.exon2;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 2554 3142 . + 1 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 3375 3851 . + . ID=g1100.t1.exon3;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 3375 3851 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 3990 4157 . + . ID=g1100.t1.exon4;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 3990 4157 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 4332 4471 . + . ID=g1100.t1.exon5;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 4332 4471 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 4650 4917 . + . ID=g1100.t1.exon6;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 4650 4917 . + 1 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 5067 5348 . + . ID=g1100.t1.exon7;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 5067 5348 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 5519 6544 . + . ID=g1100.t1.exon8;Parent=g1100.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 5519 6544 . + 0 ID=cds.g1100.t1;Parent=g1100.t1 #PROT g1100.t1 g1100 MSAATRGDGRVSSMLPAIANGRQNPYDDATSLGLDGYGGSMNSVAAGNSGMVIPHSTAASARRSTYDEMGGGRVLQLESRVDINERANRALLEETVRLQGDLKLRFRRHEEMLKEERDARLSASDSMRNAGEQIGKIAARVVRLEDNSQMDSKSLAAFMSQMKQFERGMVDSLQDLHLKRTQDVAKLGQVQREFDAARDGFEKARQSDDRKTALLVEEIRQLRSRLETQSHESSELASELRQRVKRLESENRACVEAIRRVSEQQSASDAQAAEFRGEISSRVGQLDGDFTRMVQKKGEEDLARRALDEEIARSVGDLRAGVADQDRRLTESFSAVHDAMRQAKEAEDAERVRLIEKIRDVLDAQGKRHLEKEARLRQEAATRFAAVEKVIVEERDARSLFENETRRESESRWKAVRADLEGELRGLRDLQAAAQGGWQESIARITDQLNGVNGELDATKRGMETVLRAEVKGRLKEEQRISGLLNELQMRLDAGISSVDRTIQDIDRRLSAAVEEARVLMRREVGDIEERHSRENADNSVRLSAVAGRMQRLEEERAAEMERAAEFQRILRKETQDGMANWQEFTQQQMRDVETRFQSIPDKVAEIEDRVGLFRAEVGAKMEAESQARLREIQQAKKDIGRKVSASTFDQVQTELSNRIAEIQARLNDVGTRAAQAEREIGNAKSQLLARIATESSLRGESIMELKRDFVRVQTQNDALLRQRDDGMLIGNSSATEAYRDARLTTMVGESKHQPIQSARTIEAANAGDEETVDTPRDGPTPDGDRVIGDFLKGSETPSESRPASNASNARVQPPQQRGGPVVLQQDSIFKPKFPPANAAATPPTQPSKSPDWGDDDASTSAAPPEAAVATARSRPISIADDAESRSQVSRGSVQDTGRPKSKDSSVSDARKKHGADDASEVARSRQSIGDGSVADDRDEGHGDAEDDEAYHPPEDDDYDGPRDEYGRRIVADEPEEGEHRDHDEDEEADEE* # PASA_UPDATE: g1102.t1, single gene model update, valid-1, status:[pasa:asmbl_5275,status:3], valid-1 NODE_293_length_27840_cov_62.6637 . gene 13936 18351 . + . ID=g1102;Name=g1102.t1 NODE_293_length_27840_cov_62.6637 . mRNA 13936 18351 . + . ID=g1102.t1;Parent=g1102;Name=g1102.t1 NODE_293_length_27840_cov_62.6637 . five_prime_UTR 13936 14056 . + . ID=g1102.t1.utr5p1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 13936 14059 . + . ID=g1102.t1.exon1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 14057 14059 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 14270 14275 . + . ID=g1102.t1.exon2;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 14270 14275 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 14524 14595 . + . ID=g1102.t1.exon3;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 14524 14595 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 14775 15001 . + . ID=g1102.t1.exon4;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 14775 15001 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 15322 15586 . + . ID=g1102.t1.exon5;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 15322 15586 . + 1 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 15949 16024 . + . ID=g1102.t1.exon6;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 15949 16024 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 16218 16384 . + . ID=g1102.t1.exon7;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 16218 16384 . + 2 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 16554 16692 . + . ID=g1102.t1.exon8;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 16554 16692 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 16964 17151 . + . ID=g1102.t1.exon9;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 16964 17151 . + 2 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 17339 17530 . + . ID=g1102.t1.exon10;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 17339 17530 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 17679 17778 . + . ID=g1102.t1.exon11;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 17679 17778 . + 0 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 17922 18063 . + . ID=g1102.t1.exon12;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 17922 18063 . + 2 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . exon 18202 18351 . + . ID=g1102.t1.exon13;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . CDS 18202 18220 . + 1 ID=cds.g1102.t1;Parent=g1102.t1 NODE_293_length_27840_cov_62.6637 . three_prime_UTR 18221 18351 . + . ID=g1102.t1.utr3p1;Parent=g1102.t1 #PROT g1102.t1 g1102 MAGVNPLEPMRVLKDDAQEEKAESARLSSFIGAIAVGDLVKSTLGPKGMDKILQSMSTGGIQVTNDGATILRSIGVDNPAAKILVDISRVQDEEVGDGTTSVCVLAAELLREAEKLIQKKLHPQIIIAGWRKALELARTTLTESANDHGKDVTLFRQDLLNIARTTLSSKILTHNKDHFSNLAVDAVLRLKGNQSLDAIQIIKKIGGSLKDSYLDEGFILDKKIGVNQPKRIENARILIANTPMDTDKIKVFGSRVRVDSTAKIAEIEQAEKDKMKRKVENILKHNINCFVNRQLIYNYPEQLFGDANVMAIEHADFNGIERLALVTGGEIVSTFEHPELVRLGHCKLIEEVMIGEDRMIRFSGVALGEACTVVLRGATQQILDEAERSLHDALCVLSATVKETRTVYGGGCSEMLMSNAVDKLASRTPGKEAAAIEAFARALRQIPTIIADNAGYDSTELVAQLRAAHNEGKTTAGLDMNRGAIGDMVDLGITESFKVKFQVLVSASEAAEMILRVDDILKAAPRKRQQE* # PASA_UPDATE: g1101.t1, single gene model update, valid-1, status:[pasa:asmbl_5272,status:12], valid-1 NODE_293_length_27840_cov_62.6637 . gene 6930 13271 . - . ID=g1101;Name=g1101.t1 NODE_293_length_27840_cov_62.6637 . mRNA 6930 13271 . - . ID=g1101.t1;Parent=g1101;Name=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 13159 13271 . - . ID=g1101.t1.exon1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 13159 13271 . - 0 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 12892 13017 . - . ID=g1101.t1.exon2;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 12892 13017 . - 1 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 12111 12670 . - . ID=g1101.t1.exon3;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 12111 12670 . - 1 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 10250 11372 . - . ID=g1101.t1.exon4;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 10250 11372 . - 2 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 9712 9849 . - . ID=g1101.t1.exon5;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 9712 9849 . - 1 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 9231 9345 . - . ID=g1101.t1.exon6;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 9231 9345 . - 1 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 8928 9041 . - . ID=g1101.t1.exon7;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 8928 9041 . - 0 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 8603 8737 . - . ID=g1101.t1.exon8;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 8603 8737 . - 0 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 8163 8309 . - . ID=g1101.t1.exon9;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 8163 8309 . - 0 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 7924 7990 . - . ID=g1101.t1.exon10;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 7924 7990 . - 0 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . exon 6930 7560 . - . ID=g1101.t1.exon11;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . CDS 7076 7560 . - 2 ID=cds.g1101.t1;Parent=g1101.t1 NODE_293_length_27840_cov_62.6637 . three_prime_UTR 6930 7075 . - . ID=g1101.t1.utr3p1;Parent=g1101.t1 #PROT g1101.t1 g1101 MTDRMRPLNVRGPYSLQFDGACRGNPGTCGWGACIRGRNGVILWKGCDSFDSFGTNNEAEYRALIEGLSTAIDFGIENIRVYGDSQLVIRQMTGVYQTRAARLIELKSEASSLCNKFRSVEFMHIPRERNGSADALANKALDGGCIDWTLAPANGPCDDGVFFLSARACDVPNQRDGVIHVFLEDCIDTDAVFHFGNKTVSCISEYLVKHLGLQANQHFDRNTGTVELMVEFGGYSFCCKANVVPDHVDHFMLGSDFWRRHRNCIFLSPIHGLPSIVFARGKKWRFASRALDVSKAVSERIKDKHIVREILSSNSIHYDSEIEFDERSGKRDRYRRYSSGKELDADYIGRSGNRHNSPVQRHGSRSARSQARGSVLGLTTDDIFVETEGSPLIRKRNKAGHQARRRLDHKFAVASHTHRAECLSDSAAAGVTIFADLVAFHGSTRAALLSIMTKTASHAAAVELQPSPAVAASGAAASGTAQKKKTAPVPVNCDVCDTVVQDGKFNEHVAGKKHQKRLAKISRDAAVADAKKAKAATESTAPSVVVDVPATVKVDVPAAVEVDIPPVQLAPVTQPFKADEFIPLGGDGDVNAHGQKSGAARGVGSAMRDVDGERDGRGRAGKDARMLPWVRRRYSSDPVISLHEQIEDFVAYIRPTKAEHLMRMEIVERVRQAVKSIWPGAEARDCVDVDLVVYGQWESPPLWTLARALEESRIVKSIKVIDKARVPIIKFIDATSNVPVDIGFNLPNGPSAAEFVKNEASVVIRRHPAFLPLAYVLKQFLSQRALNEVFTGGLGSYSLLLMIASFLQMQPRNRRALPTQQSNLGVSLIEFFELYGKDFNYIRTGISVRNGGSYFPKADRGWYDPFKPSLLAIEDPHQQDNDISRNSFAIAFVRQAFRHGYDTLTGELVAARDWHSQHRGKADGPPLLSRILRVESDVVVFRSWVGENWGARVESAGAGHVGSAENGDGDVVVTREKPALGDSARPIAIDATDDDDAGGNGVTAPHRQQQQQPQQQRKRQSTFGEGSAKRSRTSDSGMRR* # ORIGINAL: g1104.t1 original gene structure, not modified by PASA NODE_293_length_27840_cov_62.6637 AUGUSTUS gene 21186 23025 . + . ID=g1104;Name=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS mRNA 21186 23025 . + . ID=g1104.t1;Parent=g1104;Name=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 21186 21363 . + . ID=g1104.t1.exon1;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 21186 21363 . + 0 ID=cds.g1104.t1;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 21561 21701 . + . ID=g1104.t1.exon2;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 21561 21701 . + 2 ID=cds.g1104.t1;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 21836 22182 . + . ID=g1104.t1.exon3;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 21836 22182 . + 2 ID=cds.g1104.t1;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS exon 22411 23025 . + . ID=g1104.t1.exon4;Parent=g1104.t1 NODE_293_length_27840_cov_62.6637 AUGUSTUS CDS 22411 23025 . + 0 ID=cds.g1104.t1;Parent=g1104.t1 #PROT g1104.t1 g1104 MVPSVPGGRVDIVEIKNRLNGVLGDHSASYWESLRNFTRARLTKGELDKRAKACLGDSNVSLHNEFIRAILVNAQSTQPPPDDKENAKKSNKRKLSSLKDTPPGPNRNLEPPTKSARLTPGTASAHFSREYRAHVPRVGEAPPIPKGPKHGAQSAIAASGALIAAAASVRPPPGDVEADLCTHAHLLPDAATLRARSFVVAFENGLDDVEEGVAETVQGALEFYLKDILSTILSVRRNPTTFGNAAFVDPHVPTASAAEPLRRQCLNSISAAALATTGIPALARKPKTLCLEDLALAVELHPHILNGDIAGAERIRSRLSMPPPIFAEADALSRAARQHQEHVMLQSRRLLRPPTSPQLQSVATAKARSHQQGTPPSVRRPGSAVVVTPNPAPKSVGSSPTSVSTVIRPTADDAPVAMDAVPMETA* # PASA_UPDATE: g1106.t1, single gene model update, valid-1, status:[pasa:asmbl_5273,status:12], valid-1 NODE_293_length_27840_cov_62.6637 . gene 25389 27669 . - . ID=g1106;Name=g1106.t1 NODE_293_length_27840_cov_62.6637 . mRNA 25389 27669 . - . ID=g1106.t1;Parent=g1106;Name=g1106.t1 NODE_293_length_27840_cov_62.6637 . five_prime_UTR 27609 27669 . - . ID=g1106.t1.utr5p1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 27583 27669 . - . ID=g1106.t1.exon1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 27583 27608 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 27373 27475 . - . ID=g1106.t1.exon2;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 27373 27475 . - 1 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 27175 27281 . - . ID=g1106.t1.exon3;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 27175 27281 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 26998 27088 . - . ID=g1106.t1.exon4;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 26998 27088 . - 1 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 26784 26902 . - . ID=g1106.t1.exon5;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 26784 26902 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 26607 26688 . - . ID=g1106.t1.exon6;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 26607 26688 . - 1 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 26444 26500 . - . ID=g1106.t1.exon7;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 26444 26500 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 26210 26304 . - . ID=g1106.t1.exon8;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 26210 26304 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 25914 26076 . - . ID=g1106.t1.exon9;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 25914 26076 . - 1 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 25675 25772 . - . ID=g1106.t1.exon10;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 25675 25772 . - 0 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . exon 25389 25560 . - . ID=g1106.t1.exon11;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . CDS 25497 25560 . - 1 ID=cds.g1106.t1;Parent=g1106.t1 NODE_293_length_27840_cov_62.6637 . three_prime_UTR 25389 25496 . - . ID=g1106.t1.utr3p1;Parent=g1106.t1 #PROT g1106.t1 g1106 MITKIGINGFGRIGRIVLRAALKKKDKVQVVAINDPFINLEYMVYMFRYDSTHGRFEGTIETKDGALYVDGNRIEVHNCMKPEEIPWGKHGAEFIVESTGVFTTIDGGKKHLTGGAKKVVITAPSADAPMFVVGVNHLTYDKTKHDIVSNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHAYTATQKTVDGPSMKLWRDGRGAHQNIIPAATGAAKAVGKVIPELNGKLTGMAFRVPVPDVSVVDLTVRIEKGATYDQIKAAVKAASEGPLKGILGYTEDMVVSTDFLGDSHSSIFDADAGIALNNNFVKLISWYDNEFGYSHRVVDLIVHMSQ* # PASA_UPDATE: g1099.t1, single gene model update, valid-1, status:[pasa:asmbl_5271,status:12], valid-1 NODE_293_length_27840_cov_62.6637 . gene 155 1083 . - . ID=g1099;Name=g1099.t1 NODE_293_length_27840_cov_62.6637 . mRNA 155 1083 . - . ID=g1099.t1;Parent=g1099;Name=g1099.t1 NODE_293_length_27840_cov_62.6637 . five_prime_UTR 772 1083 . - . ID=g1099.t1.utr5p1;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . exon 676 1083 . - . ID=g1099.t1.exon1;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . CDS 676 771 . - 0 ID=cds.g1099.t1;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . exon 468 573 . - . ID=g1099.t1.exon2;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . CDS 468 573 . - 0 ID=cds.g1099.t1;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . exon 155 292 . - . ID=g1099.t1.exon3;Parent=g1099.t1 NODE_293_length_27840_cov_62.6637 . CDS 155 292 . - 2 ID=cds.g1099.t1;Parent=g1099.t1;3_prime_partial=true #PROT g1099.t1 g1099 MPPLFEAGDMDDPDEEGFPLPFDEGVVGHVQNSSLKSAAARYQYTNWNDLKDVDVKGGQLRCPRVRLAPPASHAAHIPPPEEVFAADPKLGRRRQVAEYISHKLKLEGWDEAE # PASA_UPDATE: g1103.t1, single gene model update, valid-1, status:[pasa:asmbl_5276,status:3], valid-1 NODE_293_length_27840_cov_62.6637 . gene 19086 20440 . + . ID=g1103;Name=g1103.t1 NODE_293_length_27840_cov_62.6637 . mRNA 19086 20440 . + . ID=g1103.t1;Parent=g1103;Name=g1103.t1 NODE_293_length_27840_cov_62.6637 . five_prime_UTR 19086 19130 . + . ID=g1103.t1.utr5p1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . exon 19086 19250 . + . ID=g1103.t1.exon1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . CDS 19131 19250 . + 0 ID=cds.g1103.t1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . exon 19502 19598 . + . ID=g1103.t1.exon2;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . CDS 19502 19598 . + 0 ID=cds.g1103.t1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . exon 19774 19896 . + . ID=g1103.t1.exon3;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . CDS 19774 19896 . + 2 ID=cds.g1103.t1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . exon 20134 20440 . + . ID=g1103.t1.exon4;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . CDS 20134 20282 . + 2 ID=cds.g1103.t1;Parent=g1103.t1 NODE_293_length_27840_cov_62.6637 . three_prime_UTR 20283 20440 . + . ID=g1103.t1.utr3p1;Parent=g1103.t1 #PROT g1103.t1 g1103 MSDAAEQDRKRPREECEADAKDAAAAKISRGICHIDIPVRDLSRAKKFYGDLFGWAFTDFGDTYSLFHTHNKEHNVNGGLTAVKEDVVTHSFSWIYLQVEDIEGELAKITAAGGEVIKPKSSIGESIGFTGQFKDSEGNNIGLYSLPIKAVGCVQQDAEKKE* # ORIGINAL: g2438.t1 original gene structure, not modified by PASA NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS gene 147 1906 . + . ID=g2438;Name=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS mRNA 147 1906 . + . ID=g2438.t1;Parent=g2438;Name=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS exon 147 287 . + . ID=g2438.t1.exon1;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS CDS 147 287 . + 0 ID=cds.g2438.t1;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS exon 569 1134 . + . ID=g2438.t1.exon2;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS CDS 569 1134 . + 0 ID=cds.g2438.t1;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS exon 1294 1399 . + . ID=g2438.t1.exon3;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS CDS 1294 1399 . + 1 ID=cds.g2438.t1;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS exon 1588 1641 . + . ID=g2438.t1.exon4;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS CDS 1588 1641 . + 0 ID=cds.g2438.t1;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS exon 1835 1906 . + . ID=g2438.t1.exon5;Parent=g2438.t1 NODE_3181_length_4084_cov_43.1926_potentialcontaminant AUGUSTUS CDS 1835 1906 . + 0 ID=cds.g2438.t1;Parent=g2438.t1 #PROT g2438.t1 g2438 MERNMTSLQPSKADKEELRGLYLRYRDIRMVDGESAEYVGAPLPASQSVQSVQEPTIGKYGQGAPRGRREESSRMLELSVENAEAFRRNTGGFNQGASFAQPTLGGQAITRIASAPANDSGNSRNYRGDRGSMSTDNVHPTSLGSSSNMSRMSVPTASLVRHPGGPDRVQPRSSEPALSMSLSMGASHMVQDNDSQALRRSTVAGSHVGSAQNFEGDRLARTQPAPVSSIGDQAKINRILEEYNRTKAIKKALQIRLHAYETEFQEIHGRKVSKPEDRDPIRNDYERYRELKQRIADLEGRLGSSASLSMTR* # ORIGINAL: g10350.t1 original gene structure, not modified by PASA NODE_2467_length_6166_cov_38.8601 AUGUSTUS gene 41 2306 . + . ID=g10350;Name=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS mRNA 41 2306 . + . ID=g10350.t1;Parent=g10350;Name=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 41 137 . + . ID=g10350.t1.exon1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 41 137 . + 2 ID=cds.g10350.t1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 258 314 . + . ID=g10350.t1.exon2;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 258 314 . + 1 ID=cds.g10350.t1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 541 553 . + . ID=g10350.t1.exon3;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 541 553 . + 1 ID=cds.g10350.t1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 895 988 . + . ID=g10350.t1.exon4;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 895 988 . + 0 ID=cds.g10350.t1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 1746 1871 . + . ID=g10350.t1.exon5;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 1746 1871 . + 2 ID=cds.g10350.t1;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS exon 2119 2306 . + . ID=g10350.t1.exon6;Parent=g10350.t1 NODE_2467_length_6166_cov_38.8601 AUGUSTUS CDS 2119 2306 . + 2 ID=cds.g10350.t1;Parent=g10350.t1 #PROT g10350.t1 g10350 VGKTSLVVRYVKGSYTNEITSTIGASFMTKKMLLDNCKVRLQIWDTAGQERFRSMAPMYYRGANAALLVYDITSEASFGEMKSWVTVLCVVGNKADLEDARRVETSVASKYASDIGALFCEASAKSEDGVEQLFLQVARRLMQLKTMRKSKSTDSLDRLGDGTPSSNGNDRITNLGGPGNGKRDEPLPCC* # PASA_UPDATE: g10351.t1, single gene model update, valid-1, status:[pasa:asmbl_4375,status:12], valid-1 NODE_2467_length_6166_cov_38.8601 . gene 3314 5948 . - . ID=g10351;Name=g10351.t1 NODE_2467_length_6166_cov_38.8601 . mRNA 3314 5948 . - . ID=g10351.t1;Parent=g10351;Name=g10351.t1 NODE_2467_length_6166_cov_38.8601 . five_prime_UTR 5927 5948 . - . ID=g10351.t1.utr5p1;Parent=g10351.t1 NODE_2467_length_6166_cov_38.8601 . five_prime_UTR 5448 5449 . - . ID=g10351.t1.utr5p2;Parent=g10351.t1 NODE_2467_length_6166_cov_38.8601 . exon 5927 5948 . - . ID=g10351.t1.exon1;Parent=g10351.t1 NODE_2467_length_6166_cov_38.8601 . exon 3314 5449 . - . ID=g10351.t1.exon2;Parent=g10351.t1 NODE_2467_length_6166_cov_38.8601 . CDS 3618 5447 . - 0 ID=cds.g10351.t1;Parent=g10351.t1 NODE_2467_length_6166_cov_38.8601 . three_prime_UTR 3314 3617 . - . ID=g10351.t1.utr3p1;Parent=g10351.t1 #PROT g10351.t1 g10351 MSGRSSITPSESDESEATGLMERVLFLERRMQKRTRMSRRQLRIIVTLLIFVLLGAIALATVVGVTMTRSSSVPPDPCATSFFIAGAESLKQLTALSCSSVVAIKIDNFVFPASGPSSLLSIDVEHVSNTLIVCNMAHPGLVISFPKLITVGDVKLSSLTIASIEFPVLAVASSLSMLRLSVGDNPGLSAPRLGNLTGSLFGQWLTFGRVGFPLFSSLSSVGADLKLVDVYVAGNVTFPSLATVGQAVKISSFSSPNDRTGSFVFPELVNCVALSVESTSGVEGIFFPKLQNLVTLYIADLSMAYLGSVVFNFDMSSLASSSSIVVRAVFGLASLTFRSLLSLSSLVVDGTTFLVEVNMPMLQTVDDIVLLLNPNLNVVSFPALVHVDKSFRVLGNPIIKLVELLKCAAAVLLFAMNNLLRSISFPALVNGSLAVTNNPLLEEISAPVLRFVGIVGVFNNAALGRVAFPGLVEASHAGWISNIGPISLYWILAQDQYMGRFNVSLTTINHDAYDIGDWMVSGSISLFSNANLTQIDLPALRSASMIIVEDNAKLCGPGLNLATSASVRCGCTVSITTDMLCAPLYPAVAAACVATDVSCSDLLSKYRTS* # ORIGINAL: g8780.t1 original gene structure, not modified by PASA NODE_551_length_21371_cov_46.0998 AUGUSTUS gene 5602 8051 . + . ID=g8780;Name=g8780.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS mRNA 5602 8051 . + . ID=g8780.t1;Parent=g8780;Name=g8780.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 5602 7446 . + . ID=g8780.t1.exon1;Parent=g8780.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 5602 7446 . + 0 ID=cds.g8780.t1;Parent=g8780.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 7632 8051 . + . ID=g8780.t1.exon2;Parent=g8780.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 7632 8051 . + 0 ID=cds.g8780.t1;Parent=g8780.t1 #PROT g8780.t1 g8780 MMRGRAVLREAFVSGRTVGLVNSGNSGIISLPTRCAAHLHLAVVLARSHPSCVMTNSLLSPTRARSRAVFHPPVCFAGVRARRLASIASPPTITTNTTITTRDDAQAEANTDLAADAAKTPPTGSDASTSHTVLGSIQRPQTLRREIERLFSGGRPSSPVITRVFKNIVAVTAPAHERMSLAALVVRHLTRMGTFPGGEHVITLNALLDVYAKNAASMALADELLLKMETHGPQPDVVTYSSVMNGHANTGNASAAMALLRRMQTRGVQPNAHTVGTVLKALCRGRHVAEAVEVYRAALAGGVELDVSVYNSVVSALLGAGRVEDVRLLLSDMADRGIVTDAHTVGALARHAVTVLDVGRRGQLLDQLLSISTPRECVAVYAGVMEACRRAGLNHDAVRLFAKMRSHGMTPTIDMYIGVIRSLVSLGRGDAAWEHLRLLSVDGLQPSCAIYTTLLHLAVPEQRHRPLKWACAKFSLSRASKRNSLTLTATGMDGDAEGGGAAESAATTPSSIVPTADDLTGAPTDDSLHRNALNERLVSRVLAHMDAAGVTPDTPTWLGLLSVCGALQARVLGARIVEDRVVLSTLLVNALLSVAVDYADSSYFHRLRSFMIASKIPDNVGTALLVVRQRCESLDPLGALVAWERARQTYGSVVDVHAGVHAWLLRMYFRMGDEWGFVRTAENLRRTACYPRTSTVRLIENAGESKLPMSVYRETAWLLTVFARHNKPDAGAVRSGSGSSGSDRGTETGVDLLR* # ORIGINAL: g8781.t1 original gene structure, not modified by PASA NODE_551_length_21371_cov_46.0998 AUGUSTUS gene 9344 14481 . - . ID=g8781;Name=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS mRNA 9344 14481 . - . ID=g8781.t1;Parent=g8781;Name=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 14465 14481 . - . ID=g8781.t1.exon1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 14465 14481 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 14163 14323 . - . ID=g8781.t1.exon2;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 14163 14323 . - 1 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 13735 13839 . - . ID=g8781.t1.exon3;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 13735 13839 . - 2 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 13334 13434 . - . ID=g8781.t1.exon4;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 13334 13434 . - 2 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 12847 13055 . - . ID=g8781.t1.exon5;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 12847 13055 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 12441 12576 . - . ID=g8781.t1.exon6;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 12441 12576 . - 1 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 12120 12245 . - . ID=g8781.t1.exon7;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 12120 12245 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 11570 11945 . - . ID=g8781.t1.exon8;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 11570 11945 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 11049 11262 . - . ID=g8781.t1.exon9;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 11049 11262 . - 2 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 10787 10880 . - . ID=g8781.t1.exon10;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 10787 10880 . - 1 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 10034 10147 . - . ID=g8781.t1.exon11;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 10034 10147 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 9655 9752 . - . ID=g8781.t1.exon12;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 9655 9752 . - 0 ID=cds.g8781.t1;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 9344 9488 . - . ID=g8781.t1.exon13;Parent=g8781.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 9344 9488 . - 1 ID=cds.g8781.t1;Parent=g8781.t1 #PROT g8781.t1 g8781 MAALKILVSGDVRGNVSQLFARVESVLKKNGPFDLLLCAGAFFGSDGGDWDQYRSGGKKAPITTYVLGPTSAVEVPYYSSCPSGGDLCDNIVYLGRRGVLTTAGGLQIAYLSGTFDNRAFTAPNAAENDPLHYTKSDIEALLSVVGRDDFKGVDVFLTAEWGAGVTSLSGRPPNLPANAGDAFGSPLVALAAVGLKPRYHFAGLMGIFHERAPYRNHRVLVEKPAHVTRFLAVGDVASPTKERSLYAFSVVPMRTLDGETLNKQPPTATDNPYAPVLEIASKIMEGKAQHSAPESFFFGANADRKRKREDGGSGRVPSGYICRICNVAGHLIQDCPQKRQKVAGGAEEGAGAPRTYVCRICNVPGHAIQDCPEKGSTPRGPPEGYVCRICSKEGHFIRDCPEKSTADGHEVRPIRPPQPTGPCWFCLSSPDVEKHLVVSIGTEIYVALAKGQLCDGHVLVLPIGHSPSSADLPADAVAELASYKKSLWNYFRSRDQTAVFFERNVRSQHMQLQAVPIPLSMEDAAVDAFIRVGEGLGIDFEKYGPNEQLSDLIGAEPFFSAEFQTGTKLLHRVRGRGFPLQFGREALAAPEVLNVPDRIDWKKCIPPIETEAAAAKTLKTAYLPFDFTMAE* # ORIGINAL: g8782.t1 original gene structure, not modified by PASA NODE_551_length_21371_cov_46.0998 AUGUSTUS gene 14800 21286 . + . ID=g8782;Name=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS mRNA 14800 21286 . + . ID=g8782.t1;Parent=g8782;Name=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 14800 16315 . + . ID=g8782.t1.exon1;Parent=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 14800 16315 . + 0 ID=cds.g8782.t1;Parent=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 16547 16660 . + . ID=g8782.t1.exon2;Parent=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 16547 16660 . + 2 ID=cds.g8782.t1;Parent=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 16848 21286 . + . ID=g8782.t1.exon3;Parent=g8782.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 16848 21286 . + 2 ID=cds.g8782.t1;Parent=g8782.t1 #PROT g8782.t1 g8782 MGARGGTRLVRYAASDGLFGDGTALLGHAHAQLEPRDDFFARALMREVDRGPTLLELLLPELAKPAPAEDIPGVVETAVQTEVVINGIGKGADSSVGAVHEAAVQTDYAGSQRVASTMTVVPADLSDAAATSSDGNVRHRKMHVLEASVQTDSAGSSHATIPNATASIARPPLDKSTVDFVAPGYLVKFVASASEYLTPSASRTFWRREREFLRRLHELGKRIILKTPDSSDRILISSFRRAYADMAAQLQTFVRVRDSHAQAWEDVILAQARVFVDSAARGVPLLASFFILDPPAFRGAESDAPGDATANDGDGEGEELVLRCAQEGVPDVLDEREADALRTSERRFRKTVVDGALQLADMYSSVYATASLTERAIQLAALVEEELATVAEWAEAGKALAVRREARRRECLYRHPAWNLEGVDRTYFESLLGIVCVRGPSPLSASVSESADSEYATDSRSSTSSIVSEQRQHRRDVVRPVKSASVSQRSVQSKRSPMHDTDAFSNSGFVEVEAGPLHSADVSIIEDSRSGASVESTPASERKSDGDALIVEDSRSGASVESTPASERKSESIHESLRKSDRSERSHPSRSTSVRDDASVVEEGDGDASIVEDSRSGASVESTPASERKSESIQESLRKSDRSERSHSSTSASVQDDASVVEEADVDASIVEDSRTAGSVGSTPASERKSGSIQESLRKSDRSERSQSSRSTSVRDNASVVEEGDVDASIVEDSVSVGSTPASERKSESIQESLRKSHRSHRSLSSRSTSVRDDASAVEESDADASIVEDSRSARSVGSTPASERKSESIQESLQKSDRSHRSHTSRSTSVRDDASVVEEGDGDASIVEDSRSARSVGSTPASERKSESIQESLRKSDRSQRSPSSRSTSVRDDASLGEESDGDASIVEDSRSARSVGSTPASERKSESIQDSLRKSNRSQRSPSSRSTSVRDDASMVEEGDGDASIAEDSRSARSVGSTPASERKSESIQESLRKSDRSQRSHSSTSASVQDDSSVVEEGDGDASIVEDSRTAGSVGSTPASERKSESIQESVHQPNSSVRDDALVADEASDDESAEEKSVGLGSTETSIAEEASTRPLQAVSLSQGSGGSKRSPMHDADASTSVSENVESSLSGIVRKGVSAVKTHRSVGSAEKVEEVESSQEVQSAEEVESSQEVESAEEVESVQEVDSAEEVESVQEVESAAGSTHPSHRRRHVDDVRSVQSGRSVATASSDDDDDSYGGDGFESDSEPSGVRRDQSAADEVDESPSATDAESFHGDNALPTRPSLGSPSKAPTRDVSESVSNFVADALFAELFGEAIASVAMQLPRGGKPGRLLTARTWKKSVGAIGSKSATAGADTEDEKPTGHGRTQFSPPAHERSRDVAAAGTSLSITEMTSRRMSAGQPIAWNAPPPASPRMTSLEHAAMASRATPNPDTNPTPTADAMASDTNVDAITEALFRLLCNDAIRATLVSGSGRLKRRHIGPVDESSIELAGADTSPIRSPLPDSAMTPGRPTAGENAVTPSRPILGDSAVTPGRPILGDSAVTPGRPILGDSAVTRSVAESAVTPGVIPVVVDSAVTPSGPAMGDSAMTLSRSPEPEPVTPISRQSWTVDSASGQRHGSPSPRDDVPKSSPHTDIPRIVGLPLTPSPPSRRRASVDIDRTPQSLHEHSRDSPAMSPRVSPRERAAELLAFEPSSGLAPPSVSSSSATSAPSRPSLFPPVGPVAAGRREPSVADKLAAAGVSIVAPENASNTVADALFNSLVDDVIGSAVISRGVKHARLVTRIERPPSDSANGSPLATSPLSSSREPDSPVSPQIHGPSRSPIPSHASLGSPVRSLSPAVLNGNNSNASGSSALALRRLQSRSVQREFAARAAAVIGRRLALVTPDDAAVWEDLRRSVHDVLSAGVHPDDEVMCRTIVDTAVDMAKSQMESPVLSTIAGGGRVRASIVERRVRDTTNARLAGDRARPGAILETLIGEDDGRWKALFVGGHVADEVASALLRSLIAQFADDLSRLY* # ORIGINAL: g8779.t1 original gene structure, not modified by PASA NODE_551_length_21371_cov_46.0998 AUGUSTUS gene 126 5032 . + . ID=g8779;Name=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS mRNA 126 5032 . + . ID=g8779.t1;Parent=g8779;Name=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 126 367 . + . ID=g8779.t1.exon1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 126 367 . + 0 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 558 786 . + . ID=g8779.t1.exon2;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 558 786 . + 1 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 1211 1583 . + . ID=g8779.t1.exon3;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 1211 1583 . + 0 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 1831 1923 . + . ID=g8779.t1.exon4;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 1831 1923 . + 2 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 2483 2712 . + . ID=g8779.t1.exon5;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 2483 2712 . + 2 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 2904 3167 . + . ID=g8779.t1.exon6;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 2904 3167 . + 0 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 3477 3600 . + . ID=g8779.t1.exon7;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 3477 3600 . + 0 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 3934 4037 . + . ID=g8779.t1.exon8;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 3934 4037 . + 2 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 4281 4366 . + . ID=g8779.t1.exon9;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 4281 4366 . + 0 ID=cds.g8779.t1;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS exon 4624 5032 . + . ID=g8779.t1.exon10;Parent=g8779.t1 NODE_551_length_21371_cov_46.0998 AUGUSTUS CDS 4624 5032 . + 1 ID=cds.g8779.t1;Parent=g8779.t1 #PROT g8779.t1 g8779 SIVANEQTPFTDEFYFRARALNLTIDADIRLPFGGTNYTNQVALIASKGSRVIVDIATGASQAQLLADAVRAGLAGPGYVWIVSNSGYSTGISALPAAQRLLFAGSIIADKIFDNGEPNITARFLSEWASKDFSKYAPNLRNIPAPLADKQPPTFDALCASLNKCPTDIRGYFKQVYAFAVAYHNLYEVQRVPAAQIKADVLLNELFRVDFDGLSGNNHFDARGDRIVPVTIINLRFAGNDPLSPSLVECARVDFDSMLNTNYTQTHPIVWSTNTTDTPPAHVCSGGCVNGLCTAAGVCTCSSGWGGSACNAAGGSGLDYSTIVPAVVIPCIVVVVIAMVAYQRMRVRLARACAWVIDPSELKLIEEVGKGSFGTVYKAEWRGSVVAVKTLRVLEDDETEFDSGKERQLTQGTWVRPFGTHGTGGAVSHTSSTQTRAGTTRRSRSNVRKSMATPVREFIAEIETMVKLRHPNIVMFMGAATGYPNLCLVTEFCPNNLMSFYSDDTIEMPWALRLRMLSDACRGMEFLHAAHPPILHRDIKSSNCLLTEHMQLKLADFGLAMLAEKKLLSAAASKDMHAGTLLWMAPELLDVTQSSSSVYTTKGDVYAYGIVVTELIKRCRPYHDEHHLKEISAGEFGLFVAMQVKDGLRPRAPPDTACPARMWALAECTLRESPAERPSFADISLMLAELTAQCASWPPPPSDHSSMRTTDFCDTSQ* # ORIGINAL: g5174.t1 original gene structure, not modified by PASA NODE_1532_length_10668_cov_38.5607 AUGUSTUS gene 8689 10480 . + . ID=g5174;Name=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS mRNA 8689 10480 . + . ID=g5174.t1;Parent=g5174;Name=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS exon 8689 8769 . + . ID=g5174.t1.exon1;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS CDS 8689 8769 . + 0 ID=cds.g5174.t1;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS exon 9467 9535 . + . ID=g5174.t1.exon2;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS CDS 9467 9535 . + 0 ID=cds.g5174.t1;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS exon 9834 10016 . + . ID=g5174.t1.exon3;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS CDS 9834 10016 . + 0 ID=cds.g5174.t1;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS exon 10274 10480 . + . ID=g5174.t1.exon4;Parent=g5174.t1 NODE_1532_length_10668_cov_38.5607 AUGUSTUS CDS 10274 10480 . + 0 ID=cds.g5174.t1;Parent=g5174.t1 #PROT g5174.t1 g5174 MASAEGEHKKQKLSSILGKAKRSIMNSQSDKLPKDFQRVDFSIDERDTMEGLVQEMSREELIAEVGRLTELSDGLKGLLSKAAQTEGQAHAEHTSQLDQLRQMLAPGKKFAQTATFPEVLRLAREATMLDAGGVKRRTPADGGELLVVIDDATQAPLPGAESRRLLDEKDAELRRERALK # PASA_UPDATE: g5172.t1, single gene model update, valid-1, status:[pasa:asmbl_1889,status:12], valid-1 NODE_1532_length_10668_cov_38.5607 . gene 104 2837 . - . ID=g5172;Name=g5172.t1 NODE_1532_length_10668_cov_38.5607 . mRNA 104 2837 . - . ID=g5172.t1;Parent=g5172;Name=g5172.t1 NODE_1532_length_10668_cov_38.5607 . five_prime_UTR 2768 2837 . - . ID=g5172.t1.utr5p1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 2567 2837 . - . ID=g5172.t1.exon1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 2567 2767 . - 0 ID=cds.g5172.t1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 2219 2344 . - . ID=g5172.t1.exon2;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 2219 2344 . - 0 ID=cds.g5172.t1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 1417 1776 . - . ID=g5172.t1.exon3;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 1417 1776 . - 0 ID=cds.g5172.t1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 737 990 . - . ID=g5172.t1.exon4;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 737 990 . - 0 ID=cds.g5172.t1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 294 463 . - . ID=g5172.t1.exon5;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 294 463 . - 1 ID=cds.g5172.t1;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . exon 104 153 . - . ID=g5172.t1.exon6;Parent=g5172.t1 NODE_1532_length_10668_cov_38.5607 . CDS 104 153 . - 2 ID=cds.g5172.t1;Parent=g5172.t1;3_prime_partial=true #PROT g5172.t1 g5172 MGNSHGGGLVSSSSRGTLKRGSADAFHKAKGEDRNDGASDAPPVRLPSQAGFDDSHLDAWLFGTAIQVDHADLGFHVGDRPFQTLYECECFKPRTIVFPEGALMQLRVKFLLAQNESLYMVHNLNQTIQVVPGDKYPEFAAILERKERWAVFVGDFTATTASGTPHEVKLSEIEVPAVWPRKIQSFIYFTDGSGTVLARVVFHGIKIDRKEGMLLRAVRDERTRREKSMDGPEKYDSSFVAAPHDNDDEDEDEWAMVDRPPVDRTAPDAARPIDVDGFVERLTKSEDYRNLLPSMTTRPIRFVEGTDGVQIAYREFLPENGCVKALIVHYHHVGYNGSLHNYFCEKLCRDNNYACFNMDLRGHGRSHGSRGHSPTPTQLLEDIRTVV # PASA_UPDATE: g5173.t1, single gene model update, valid-1, status:[pasa:asmbl_1890,status:12], valid-1 NODE_1532_length_10668_cov_38.5607 . gene 3145 7916 . + . ID=g5173;Name=g5173.t1 NODE_1532_length_10668_cov_38.5607 . mRNA 3145 7916 . + . ID=g5173.t1;Parent=g5173;Name=g5173.t1 NODE_1532_length_10668_cov_38.5607 . five_prime_UTR 3145 3469 . + . ID=g5173.t1.utr5p1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 3145 4552 . + . ID=g5173.t1.exon1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 3470 4552 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 4773 5006 . + . ID=g5173.t1.exon2;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 4773 5006 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 5331 5672 . + . ID=g5173.t1.exon3;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 5331 5672 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 5897 6142 . + . ID=g5173.t1.exon4;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 5897 6142 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 6404 6763 . + . ID=g5173.t1.exon5;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 6404 6763 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 7113 7277 . + . ID=g5173.t1.exon6;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 7113 7277 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 7529 7624 . + . ID=g5173.t1.exon7;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 7529 7624 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . exon 7790 7916 . + . ID=g5173.t1.exon8;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . CDS 7790 7897 . + 0 ID=cds.g5173.t1;Parent=g5173.t1 NODE_1532_length_10668_cov_38.5607 . three_prime_UTR 7898 7916 . + . ID=g5173.t1.utr3p1;Parent=g5173.t1 #PROT g5173.t1 g5173 MMDPAVLDYRSSVPHVDDEALQEHLERVQKALIASVDRQLVAMEERLQDRDFEVQRGEERKKDMGAMLYNAQVELRRLNDSMADARRRTDAAEIARKLSHSEQMRLERLLSDARTENSGLRLENNGLRDELHRASGTAEQLKELNAAYNSDIKVRRGLEGRLESDLALVREDHEDTKRKLEGAEKTIRRLEQEVESTNKALARKTTEANVSRVAVEKLERELDQTAGAAKGLVRQWEDGLNAMSRRDETLQAVVQESARLQDAADLSKRVARTSEAEAERLRSERDRAIAEAEAMRGALDRARIEVGVLEQRNSELLRRSQLAEGVAHMFQADIEGVRTQITQLEDESMRRGVAAVHMKTQREEAVRRLDEALERNDSTRQRAEHELRELDHSLEKMSVEQEGRVQELRNLNCVLRAKMKETERNAEQVKKERDSLNVQVRHIGGHYEQLYRDSRYLMDTLERKQHAISTLTSQLGAVNYDSKTKPLEITVRRMGKELEDMRAEYEQLKGRWVENQGETVKLGRTNAKLTDSESELKTRLLITETIGEKTKQEADGLRKEVLEQHEDKSRVLAELRRIQPMVQDLEYRNRVLEDRCEELRRKLAAAETDSRASAHALRAEVRQLQLERDELRRTQSAELKSQMVMERKLTITREILHKKREDERDSSKRSNELSVKLSKAERKYAEVAQSLQTWSDHAVVQIESSAAAKRARNAVRDSSAEEDDAQLLRLKLNRATSELAQARNEMTALRARMDELASRSVEIGRHLSEERRMRTHIEEDFARCKADLKSLSARCVRAEALAASIETQFKECKPNVQISYAFAPDIEPSPMLLSALATPITAAPLDGIKSSPSSRVESRLSSTTGSKKPLGAIVASA* # ORIGINAL: g14150.t1 original gene structure, not modified by PASA NODE_2990_length_4583_cov_42.3512 AUGUSTUS gene 480 2288 . - . ID=g14150;Name=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS mRNA 480 2288 . - . ID=g14150.t1;Parent=g14150;Name=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS exon 2165 2288 . - . ID=g14150.t1.exon1;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS CDS 2165 2288 . - 0 ID=cds.g14150.t1;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS exon 1676 1818 . - . ID=g14150.t1.exon2;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS CDS 1676 1818 . - 2 ID=cds.g14150.t1;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS exon 1204 1305 . - . ID=g14150.t1.exon3;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS CDS 1204 1305 . - 0 ID=cds.g14150.t1;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS exon 731 891 . - . ID=g14150.t1.exon4;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS CDS 731 891 . - 0 ID=cds.g14150.t1;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS exon 480 574 . - . ID=g14150.t1.exon5;Parent=g14150.t1 NODE_2990_length_4583_cov_42.3512 AUGUSTUS CDS 480 574 . - 1 ID=cds.g14150.t1;Parent=g14150.t1 #PROT g14150.t1 g14150 MDGDVLANPKEAVTWAAFVGNLPRLKTLLSSGSGVNGKDKEAGRTPLHAAAYRGNLECAITLLKNGADVNQKDRMWCTPLHFAAAEGYEDMVKMLIERGAESNSRDKMYQTPLHVAAMNGHVQSVRYLLEKSADVNACDRAGRTGLHLASYAGHSAVVVALLEGGARGNVADKQGRSCLHWAAYGGKSETLSSLMAASSKEWNNPDKR # PASA_UPDATE: g14151.t1, single gene model update, valid-1, status:[pasa:asmbl_5354,status:12], valid-1 NODE_2990_length_4583_cov_42.3512 . gene 3037 4422 . + . ID=g14151;Name=g14151.t1 NODE_2990_length_4583_cov_42.3512 . mRNA 3037 4422 . + . ID=g14151.t1;Parent=g14151;Name=g14151.t1 NODE_2990_length_4583_cov_42.3512 . five_prime_UTR 3037 3206 . + . ID=g14151.t1.utr5p1;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . five_prime_UTR 3360 3370 . + . ID=g14151.t1.utr5p2;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . exon 3037 3206 . + . ID=g14151.t1.exon1;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . exon 3360 3685 . + . ID=g14151.t1.exon2;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . CDS 3371 3685 . + 0 ID=cds.g14151.t1;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . exon 3926 3996 . + . ID=g14151.t1.exon3;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . CDS 3926 3996 . + 0 ID=cds.g14151.t1;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . exon 4227 4422 . + . ID=g14151.t1.exon4;Parent=g14151.t1 NODE_2990_length_4583_cov_42.3512 . CDS 4227 4422 . + 1 ID=cds.g14151.t1;Parent=g14151.t1 #PROT g14151.t1 g14151 MKALGATEPRVLAVSVTDGFDSRDNSPIGIDVDDAHHSSGAASATPASASAPGHATPSGRALDDKQWPLLIRLFLGTTVFYAARSGMTIAVVKMKSELGYGPEVMGLVLSSFFWGYITTQMIGGHLADRYSGSRLIGMAAMLWGAATFFIPDACDMMGVTAIIALRIVTGVFQGFHFPSLANILSREISAERR* # ORIGINAL: g6250.t1 original gene structure, not modified by PASA NODE_2629_length_5607_cov_35.8371 AUGUSTUS gene 102 4808 . - . ID=g6250;Name=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS mRNA 102 4808 . - . ID=g6250.t1;Parent=g6250;Name=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 4727 4808 . - . ID=g6250.t1.exon1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 4727 4808 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 4379 4458 . - . ID=g6250.t1.exon2;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 4379 4458 . - 2 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 4068 4151 . - . ID=g6250.t1.exon3;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 4068 4151 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 3459 3560 . - . ID=g6250.t1.exon4;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 3459 3560 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 3237 3298 . - . ID=g6250.t1.exon5;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 3237 3298 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 2653 2736 . - . ID=g6250.t1.exon6;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 2653 2736 . - 1 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 2206 2263 . - . ID=g6250.t1.exon7;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 2206 2263 . - 1 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 1886 2015 . - . ID=g6250.t1.exon8;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 1886 2015 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 1568 1686 . - . ID=g6250.t1.exon9;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 1568 1686 . - 2 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 1093 1203 . - . ID=g6250.t1.exon10;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 1093 1203 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 544 709 . - . ID=g6250.t1.exon11;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 544 709 . - 0 ID=cds.g6250.t1;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS exon 102 217 . - . ID=g6250.t1.exon12;Parent=g6250.t1 NODE_2629_length_5607_cov_35.8371 AUGUSTUS CDS 102 217 . - 2 ID=cds.g6250.t1;Parent=g6250.t1 #PROT g6250.t1 g6250 MKRGSSDRLGTVRQPGRTSSQDSLNHSGDEMRTSMENLDIPDEHELVARFEQVLAVMNLPADKLDIMRMMPADKKWRLIQDKEIKGQQEVEKSKFAPDHYVKDLRAQSKSMAKKKKVKPLLDLLKSLEVSLRTNTMSWVKSFIDSPNDGLQAILEFMREMDADKKQEGEEHICVLCLKAIMNNTYGFTHVMYMYPDSIKLIALSLTNEKYTTKGLALELMAAVCLVPDGHQLVLNAMDNFKFITGESTRFEKLVSALRKATDNYSFQVTCMSFINIVVHSVDDLNFRIYLQYEFQKLHLDDILDELLQANVDALDKQITAYKDNFFDVNSLAEYESEREVTLDELSRLRQSSEDTGRKLEDTTKELDGIKQTCHSLQIETQNTRMQKEQAIAEIRQLK # PASA_UPDATE: g7464.t1, single gene model update, valid-1, status:[pasa:asmbl_684,status:12], valid-1 NODE_1183_length_13331_cov_60.1179 . gene 4884 8350 . + . ID=g7464;Name=g7464.t1 NODE_1183_length_13331_cov_60.1179 . mRNA 4884 8350 . + . ID=g7464.t1;Parent=g7464;Name=g7464.t1 NODE_1183_length_13331_cov_60.1179 . exon 4884 8350 . + . ID=g7464.t1.exon1;Parent=g7464.t1 NODE_1183_length_13331_cov_60.1179 . CDS 4884 8309 . + 0 ID=cds.g7464.t1;Parent=g7464.t1 NODE_1183_length_13331_cov_60.1179 . three_prime_UTR 8310 8350 . + . ID=g7464.t1.utr3p1;Parent=g7464.t1 #PROT g7464.t1 g7464 MQLANTFEQRTLLEHLLDAPKFTFGDVTYKPRDPGDYVLLHFEEALHLAASLSTDTKIPVNVMNRNHDGPSAVLANKLVDCFKTAFAPFELDPTNPLDMQLIFGSFDANVAYASKFRWTADLIFANWDESLLGISLTDHGAKIEDARALITKRSRIRVTFVRLCILCNLLYQPLARRVVRRYLNGAFAYNLQIHCDTHIPMLLHYERVVRLSQCVGIVDQPPLSAVADVDQDLRTKKPRAEWYHDDCIRVNGLANKPEEHWTPNAEMAVWMDTLPNLIRDIEEFGFNGIECDRPFYKVTRAIYKTRFRRCGLRTYDTMILRFCAESKHGWQTFACIMSMVACTLLGNYEESGSLHVHGNFALRASIYSRYLVNVSIAKMVGPFKYNYMIPFLSVAEYVHRLLGQVPFILDVIRNSYQIDDIVKQLCELSSDAVSAAFQAPASEVLSDIFKGHGWPQKACDVLGTPVRGRLKTFRNSNLFAAQQSDLVTTLHRITEQHVRLYAHRVPVFSTETVELIGTCARTHFHPTLGPFDPLKLVHLGFTPVMIQVVADAIFYYHEKTTEGNIKACISFLSVRMPVAFHALHKLLTFIVDFSRIIAHPISYDVYCRQVATLRRIHSVPDDAPLPAWMDGVFVCYHDRAIKHHIAPSWTSERKAENVGTNRVSFDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDMDDQEWEQLLQLSDSDSSSESDSSSDGSDSEVMSDTDVAFNRFTQRMDDIIEDTSDGDEIPWKMHTNKQGINERRQPRTLTILQTQNRLGKYAFAGIGNVDKLPGHLQKMWKRATSMRAIKPLRSGKKRRARKRNREVMTNDEIEAEQTYARYEWTVSNLLTTYTRCSQHDLEVVHMLGKVLYIDGRSYMLCTNCGEITEYTTLQLFPDQAACKLCYVPPRTVDKLSMILGTASENPVGDETNAPAPTVLDAVLNVDTFMKDRYFATISDYVGQRVDSIVASAVASKKNVTVVAGGNTQSHTVACNAHSNAKPGAQKIIYMCDYCGEPIKNTSAWDVAQRRGYYVVGSTWRGFRHYCQTHNVWWLKVNRDHVLSHDKVWQHIKSSNMLIQKASKSYHKSQPMTMKERARQQHGLT* # ORIGINAL: g7461.t1 original gene structure, not modified by PASA NODE_1183_length_13331_cov_60.1179 AUGUSTUS gene 1 1650 . - . ID=g7461;Name=g7461.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS mRNA 1 1650 . - . ID=g7461.t1;Parent=g7461;Name=g7461.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS exon 1 1650 . - . ID=g7461.t1.exon1;Parent=g7461.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS CDS 1 1650 . - 0 ID=cds.g7461.t1;Parent=g7461.t1 #PROT g7461.t1 g7461 MAWVRLRRANSLDDTISASLEESITRLAHLMFQTKSFMQNFVLTSISNNSDTTSFGLSNEETALQLSNVVANILIVQDLYLSDTRLWFYNAHYNSIYVDLSASYVSNEIRQIVHLLLTNTTHAFQQFRTVTASDSKGRTITKDEFGQLRNELRIAFLQEYRPCAVVDVYIRDYIMEMATKKSFQLACNAASRLLQSVVGGDAILRPFADRSTAMDAVRKNLALPLHDQTSENTWLTFMDLCGNWVAPAQVLKFLAAIAQPIWRLETMAGESPFVSIVKRGEALFRQTDRDRQIDSFDTSTVFGIEMNRASNTVSTIHSGKSVWRVVYGCINEVEHIVRATLGQPSEFDSQMLAQIVHGALVDTLSLPVAMALVHISDQGGMARGLTFQEDVGTGIYPHHSMQPYIWFTRMRHPNQMYPTGMSMVPDVADFAMFRERLRESVYTMRIIGTVLAYHAAESFPESRMLDDEAFTDVFWDAFEIARNGTSWQESKTTTISCMAQHVCPNPVTHPFRLATVMEKLSPYSALFYRMRQYGHFYHRFIYSDETPAAL # ORIGINAL: g7463.t1 original gene structure, not modified by PASA NODE_1183_length_13331_cov_60.1179 AUGUSTUS gene 3004 4836 . + . ID=g7463;Name=g7463.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS mRNA 3004 4836 . + . ID=g7463.t1;Parent=g7463;Name=g7463.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS exon 3004 4836 . + . ID=g7463.t1.exon1;Parent=g7463.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS CDS 3004 4836 . + 0 ID=cds.g7463.t1;Parent=g7463.t1 #PROT g7463.t1 g7463 MNADTNGSLLSFMDSDSDDANTPQKAPPKIVRPVRQAARPKVLKPTDHTMAAPTSTRAVARLATQAAESLTQVFGKDLRASTKAKAAPESSPPLKKRRVGPRETDTCTSDGEEAIVIMDTIYPKTVEGVSMPAPAPKPKNGKGKRPATSSDAAEQPPASCTVPQVTKTNGTGTSETRTYGDFLSEHPEQLQKMKEFQETVRADATRGVKCKPPPPVSFAQKFPRTYRTMMGSVVADFDLRNETHLDSHLEHAEPMSVVATTIVDPERGSKPPKAFYDRSGWLGPNMTDITEAGIRRNVIVAQSTVDQVSGKTGAVLSTTNHFNDDQQTAITAKLVVADAVQAMSVNAEQHLPNVQLRKAAFENELLREAGKYHVNISIGYVQLPPCMNGESCIGYVGAIPLDESLRSDPAFMSLPHVVMNDKTKPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEYARKFMFAPSPKCFTGLIGAVPKALPNMLRLVRESADSTRVRVSQASIMFYEGDKREDLTDAANTETRDALLNAASARRIENGLALLPIHSHIPPFDTLRQPAANVTVPSGFQ* # ORIGINAL: g7462.t1 original gene structure, not modified by PASA NODE_1183_length_13331_cov_60.1179 AUGUSTUS gene 1809 2873 . + . ID=g7462;Name=g7462.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS mRNA 1809 2873 . + . ID=g7462.t1;Parent=g7462;Name=g7462.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS exon 1809 2873 . + . ID=g7462.t1.exon1;Parent=g7462.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS CDS 1809 2873 . + 0 ID=cds.g7462.t1;Parent=g7462.t1 #PROT g7462.t1 g7462 MSTTLLDLFRESPSRPPPAKPLSLLELFTNDDDDDDEAVDVEKAMDIDKPLPPPTVKPLSLLELFTNDDDDDSDVPITAADEDEEEEEEEERDCSETDANVMDVYASTCETTDIRYMMGDCHKLICTIPSQSVQMVYCDPPYGITDAVWDKPLDWKLLWPELWRVLKPNGAIVVHASQPFTFDLVATQRKYFKYSWLWIKGNPTGFLNAKHQPLRKTEDVCVFYKRKPLYNPQMVALNTPYVRSTAFATTHDFYNTKGRLVPFVNKTYTEKYPTNVLPEFKMHSSERLRKPIALCEYLIRTYTNENDLVLDITAGGGGSAMASRNTNRRFIGFEYDEETHKRGVTLLSASAPKP* # PASA_UPDATE: g7466.t1, single gene model update, valid-1, status:[pasa:asmbl_685,status:12],[pasa:asmbl_686,status:12], valid-1 NODE_1183_length_13331_cov_60.1179 . gene 10994 13301 . - . ID=g7466;Name=g7466.t1 NODE_1183_length_13331_cov_60.1179 . mRNA 10994 13301 . - . ID=g7466.t1;Parent=g7466;Name=g7466.t1 NODE_1183_length_13331_cov_60.1179 . five_prime_UTR 13257 13301 . - . ID=g7466.t1.utr5p1;Parent=g7466.t1 NODE_1183_length_13331_cov_60.1179 . exon 10994 13301 . - . ID=g7466.t1.exon1;Parent=g7466.t1 NODE_1183_length_13331_cov_60.1179 . CDS 11121 13256 . - 0 ID=cds.g7466.t1;Parent=g7466.t1 NODE_1183_length_13331_cov_60.1179 . three_prime_UTR 10994 11120 . - . ID=g7466.t1.utr3p1;Parent=g7466.t1 #PROT g7466.t1 g7466 MCYVCLGCDRVALNAKPVDEPDDKYNASCPSCDPSKKTLTPPYGLAKEYMVTAEKLATSRKRKADDVKAATPAKKAKIVSKEPAPPKEATPPPKQATPPKQATFQKQATPPPKQATPPKQATFQKHATPPPKAATPAKRRLDDANETSPNKRAAIDGRSDVPDGASRAGSVSPSRTPSPQSIGVVTPREKNTLESTNATLQSENHKCVNCDEIIPSDAKMDDACITRPGCDKQRRLCDSCNKTIACVRCSRKQCTQCGATDICSACPGGSSFLVRRADVDGAERTIVMEPSYANAKAVHAAQLSDTVVNSMGWTWERVVPPECLKAAILFVDIQAKSAKTIKRALLSSFDTILSDINGDKSRPVIFLQMSPEHEKRIRDETAKVASKRSAYAAIKGNITARTAADKRKGEASAVIGKCGVCDKNFGSHFNAHVVCNLTTWCQGATGICTTCVRGIACVVCHRLQCLICGVDPTCKDCKFTKRYLVRLGVPNTRMVVIETPDDESLVDVAIENGWTACPVIAPGTGTVAGIRVISPTDKRIRKILNKTTVELAKAIKSNKIVGRVPRFEEQLRGEMASIQAKRDVHNSLCQTMGLDSSTSVVHISESSNAPLPISTDGYGQPCLVCKNATGPLRPELICHMGNCLRRTGLCESCAEGLACIKCKKPMCMMCGDEPFCATCKTVPTTDAAAAFKAIKAKKALWERFNAVVDNI* # ORIGINAL: g7465.t1 original gene structure, not modified by PASA NODE_1183_length_13331_cov_60.1179 AUGUSTUS gene 8596 10599 . + . ID=g7465;Name=g7465.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS mRNA 8596 10599 . + . ID=g7465.t1;Parent=g7465;Name=g7465.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS exon 8596 10599 . + . ID=g7465.t1.exon1;Parent=g7465.t1 NODE_1183_length_13331_cov_60.1179 AUGUSTUS CDS 8596 10599 . + 0 ID=cds.g7465.t1;Parent=g7465.t1 #PROT g7465.t1 g7465 MSLRSFCSHAGLVEKLRNVVLRMHAISADAYALLNAHVRRLLLESNQPLPPKMFVQNTLTQYFKIVSKSSCEGKTVKIDPALQATFDDIPYFTNLAKHDRTHLSHAIDCAARQLETAIRENIARHYFKRQWRVLRLQHPDDTVDQIRSRVLVQNDALSGPKGIAYDLKAEPEKFLRVMWHWLQFIEEKRANWPKYSPARMPKTFALLPIKRSYVPSYIHVSTDVLNDLVTEFKECKPYRAAKKAPKATPKRAPKATPKRAPKATPKRAPKATPKRAPKATPKRSPKATPKRVPKATPKGVSQSNPRKRKLSADDNDDNCDDVDKANEAILDDLLWAPFFRLNKAANGRRAVFAHFISTDGISVSVLVNLLNKSGSPPVAVHAKKKRRLNTTSASAAASGSAAAAVPQYTDRLVVGIDPGKKELLHATCDSDARTRAHSVVYTAAQRSRELGTTRFAQRQNGRRTKAVQEAKTAIAKHDSYGSSLESFMKYWTAHAEANKVLGPHYANDLFRIHKWWTYGNKQRSEAKLVHTLQTTFGTDAVLAYGNWDPGPMQMRGCASTPNKGLHKLLAAHFTVVDVPEYKTIKTCFKCHGIAGAVPHMKHTIKGKEREIRGLRRCTNEHCATYWTRDYNAALNIRANYMHYAAHGQWAPRFMRDCDSSSSSSVSS* # ORIGINAL: g1566.t1 original gene structure, not modified by PASA NODE_3573_length_3178_cov_39.0619 AUGUSTUS gene 226 2519 . - . ID=g1566;Name=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS mRNA 226 2519 . - . ID=g1566.t1;Parent=g1566;Name=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 2424 2519 . - . ID=g1566.t1.exon1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 2424 2519 . - 0 ID=cds.g1566.t1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 2053 2159 . - . ID=g1566.t1.exon2;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 2053 2159 . - 0 ID=cds.g1566.t1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 1783 1832 . - . ID=g1566.t1.exon3;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 1783 1832 . - 1 ID=cds.g1566.t1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 1134 1342 . - . ID=g1566.t1.exon4;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 1134 1342 . - 2 ID=cds.g1566.t1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 639 778 . - . ID=g1566.t1.exon5;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 639 778 . - 0 ID=cds.g1566.t1;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS exon 226 373 . - . ID=g1566.t1.exon6;Parent=g1566.t1 NODE_3573_length_3178_cov_39.0619 AUGUSTUS CDS 226 373 . - 1 ID=cds.g1566.t1;Parent=g1566.t1 #PROT g1566.t1 g1566 MDPASQRRKSSLINKLFTAQQLQSKDTKRGSQTSLSIPSITEGDDVPPGPSLADEKVAHAGTMESPPRPRVFTLESKPAGRRNTAGFVMEKHSRHASESKTTKSRSMFTTLDKRFTIGSNDKNKMFGMDLQKLLKKEGTRIPLVVELMVAYLEEVFSSDYKTVSYNIKLFCTLSEKLEAKTNEKDKKVEADEFRKSVHALKESLEKGSSRMSIPLLTPAHVVLGCLKLFFTLLPQPLLPRVLRDLAELGQ # ORIGINAL: g5222.t1 original gene structure, not modified by PASA NODE_4906_length_1149_cov_62.7849 AUGUSTUS gene 1 1149 . - . ID=g5222;Name=g5222.t1 NODE_4906_length_1149_cov_62.7849 AUGUSTUS mRNA 1 1149 . - . ID=g5222.t1;Parent=g5222;Name=g5222.t1 NODE_4906_length_1149_cov_62.7849 AUGUSTUS exon 1 1149 . - . ID=g5222.t1.exon1;Parent=g5222.t1 NODE_4906_length_1149_cov_62.7849 AUGUSTUS CDS 1 1149 . - 0 ID=cds.g5222.t1;Parent=g5222.t1 #PROT g5222.t1 g5222 IIATYLLNGTLLLVGSDTVAHYQQVLRLVTYSNSADEPDPTARSISVAVTDGVDVSIVHTITVSIELVNDAPVVKRSGSGSMGPSAFQFVEDDVDTPLLPADIESTDADATSVVEVRVTLTNFGSLEYGVGDTIVFSALGGMQSSTSTSGNAKSYILSSVGGIASSDVTAVLRGIKYRNTDQAPDTNLTREFEVRVTDSGSVRSVSNVYVVTVTVDAVNDAPVLSNVGTAASLGSILEDVASGSNGGVFLQPIIGSHIGDVDASPLYGIAVTAADNANGQWQYNIGSGWTDLIPSSAGVVLPLNANTKVRFVPDANFCLTTTFDFVAWDRTDALSGGDVTSDISTSAYSTATWSATLSVTPVNDVPVLTATAADPSFIEGSNA # ORIGINAL: g3973.t1 original gene structure, not modified by PASA NODE_4000_length_2378_cov_36.8307 AUGUSTUS gene 1449 2190 . - . ID=g3973;Name=g3973.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS mRNA 1449 2190 . - . ID=g3973.t1;Parent=g3973;Name=g3973.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS exon 2094 2190 . - . ID=g3973.t1.exon1;Parent=g3973.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS CDS 2094 2190 . - 0 ID=cds.g3973.t1;Parent=g3973.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS exon 1449 1585 . - . ID=g3973.t1.exon2;Parent=g3973.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS CDS 1449 1585 . - 2 ID=cds.g3973.t1;Parent=g3973.t1 #PROT g3973.t1 g3973 MDLKHLLVEAKQKVPPFLNEFGPEAELYLDIGNRKGCTYCNGLGHRITECPKLETEQKQKAGAINRRDFLAVNSGNY* # ORIGINAL: g3972.t1 original gene structure, not modified by PASA NODE_4000_length_2378_cov_36.8307 AUGUSTUS gene 2 858 . + . ID=g3972;Name=g3972.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS mRNA 2 858 . + . ID=g3972.t1;Parent=g3972;Name=g3972.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS exon 2 204 . + . ID=g3972.t1.exon1;Parent=g3972.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS CDS 2 204 . + 2 ID=cds.g3972.t1;Parent=g3972.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS exon 502 858 . + . ID=g3972.t1.exon2;Parent=g3972.t1 NODE_4000_length_2378_cov_36.8307 AUGUSTUS CDS 502 858 . + 0 ID=cds.g3972.t1;Parent=g3972.t1 #PROT g3972.t1 g3972 QQQQLQQLQNQLQQQQRQQQQQQQQQQQQQQQQQQQQQQQQQQLQQLQSNPAHAQVLRQLGGLNPQQLTDFFATLAQDQSHQLQPQQQRQTQQQQQQQQQQQQQQLQKQQLIRQQLFRAQQQAQQQAQQQAQQQAQQQQQLMNDPVIVDLTDVALNGGGLDGVDMSNNLSDTDLNAFDFDWSATS* # ORIGINAL: g3003.t1 original gene structure, not modified by PASA NODE_5536_length_811_cov_64.5734_potentialcontaminant AUGUSTUS gene 1 781 . - . ID=g3003;Name=g3003.t1 NODE_5536_length_811_cov_64.5734_potentialcontaminant AUGUSTUS mRNA 1 781 . - . ID=g3003.t1;Parent=g3003;Name=g3003.t1 NODE_5536_length_811_cov_64.5734_potentialcontaminant AUGUSTUS exon 1 781 . - . ID=g3003.t1.exon1;Parent=g3003.t1 NODE_5536_length_811_cov_64.5734_potentialcontaminant AUGUSTUS CDS 1 781 . - 0 ID=cds.g3003.t1;Parent=g3003.t1 #PROT g3003.t1 g3003 MLTKTQQVYKQLFTRACNQQPDETTGAVGYLSVITAILGYWMTATPPNNASVNLVDHFAWRIITSVDAWNTDQHNLTNAGNTTDNPYPSGSSSEFHTFHTLSIALQSYKMFRDLVDAKQGSQLLTYLATTTPALTIQTRIRNILAITDIIVAPEDTSDLTDAAFDTYVLDSLMLTALPSSNLEILVNIRRQFNRLTANTQAAVSSLLLTALSDIENGESIDDQLQDCAANYIFDTDSILTSSTTQGLAAATANKIIVHLL # PASA_UPDATE: g9839.t1, single gene model update, valid-1, status:[pasa:asmbl_5660,status:12], valid-1 NODE_3168_length_4126_cov_39.5406 . gene 101 826 . + . ID=g9839;Name=g9839.t1 NODE_3168_length_4126_cov_39.5406 . mRNA 101 826 . + . ID=g9839.t1;Parent=g9839;Name=g9839.t1 NODE_3168_length_4126_cov_39.5406 . five_prime_UTR 101 102 . + . ID=g9839.t1.utr5p1;Parent=g9839.t1 NODE_3168_length_4126_cov_39.5406 . exon 101 227 . + . ID=g9839.t1.exon1;Parent=g9839.t1 NODE_3168_length_4126_cov_39.5406 . CDS 103 227 . + 0 ID=cds.g9839.t1;Parent=g9839.t1;5_prime_partial=true NODE_3168_length_4126_cov_39.5406 . exon 541 826 . + . ID=g9839.t1.exon2;Parent=g9839.t1 NODE_3168_length_4126_cov_39.5406 . CDS 541 688 . + 1 ID=cds.g9839.t1;Parent=g9839.t1 NODE_3168_length_4126_cov_39.5406 . three_prime_UTR 689 826 . + . ID=g9839.t1.utr3p1;Parent=g9839.t1 #PROT g9839.t1 g9839 GPPLGHGDVCDDGLNVGCADLLSEIQNRIRPTVHVFGHVHEGYGITTDEHTKYINASTCNRSYSPSNPPIVWDAVPRVQGLADDLIAKPK* # ORIGINAL: g9840.t1 original gene structure, not modified by PASA NODE_3168_length_4126_cov_39.5406 AUGUSTUS gene 997 3828 . - . ID=g9840;Name=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS mRNA 997 3828 . - . ID=g9840.t1;Parent=g9840;Name=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 3820 3828 . - . ID=g9840.t1.exon1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 3820 3828 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 3646 3716 . - . ID=g9840.t1.exon2;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 3646 3716 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 3378 3448 . - . ID=g9840.t1.exon3;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 3378 3448 . - 1 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 3139 3176 . - . ID=g9840.t1.exon4;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 3139 3176 . - 2 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 2774 2929 . - . ID=g9840.t1.exon5;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 2774 2929 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 2519 2557 . - . ID=g9840.t1.exon6;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 2519 2557 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 2019 2273 . - . ID=g9840.t1.exon7;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 2019 2273 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 1597 1726 . - . ID=g9840.t1.exon8;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 1597 1726 . - 0 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 1309 1357 . - . ID=g9840.t1.exon9;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 1309 1357 . - 2 ID=cds.g9840.t1;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS exon 997 1081 . - . ID=g9840.t1.exon10;Parent=g9840.t1 NODE_3168_length_4126_cov_39.5406 AUGUSTUS CDS 997 1081 . - 1 ID=cds.g9840.t1;Parent=g9840.t1 #PROT g9840.t1 g9840 MELVDQQRLDHLFSEGEEIVFYTHGPSTVHLTGYTPPEPEGDILDMDDLDGEDFSGEDDDDSEGDEDDDSDAFEDVDDDEDDDEEEEEEDEEEEEEEASPVPVKGGKRPAEKPAKEEPPAKKAKIEQVAPPKKEEPKKAQPKQEEPKKAQPKQEEPKKAQPKQEEPKKAQPKQEEKPKAQQQQPQPKKQAVAGGTVVEDISIGSGKKAKPGSRVSVYYRGRLQSNNQEFDKSVSGKGFSFRLGAGEVIKGWDNGIVGMQVGGKRRLTIPPGQAYGDKRSGPIPAKSTLLFDVELLAVKEK* # PASA_UPDATE: g11529.t1, single gene model update, valid-1, status:[pasa:asmbl_7095,status:12], valid-1 NODE_4204_length_2030_cov_38.8363 . gene 96 513 . + . ID=g11529;Name=g11529.t1 NODE_4204_length_2030_cov_38.8363 . mRNA 96 513 . + . ID=g11529.t1;Parent=g11529;Name=g11529.t1 NODE_4204_length_2030_cov_38.8363 . five_prime_UTR 96 97 . + . ID=g11529.t1.utr5p1;Parent=g11529.t1 NODE_4204_length_2030_cov_38.8363 . exon 96 513 . + . ID=g11529.t1.exon1;Parent=g11529.t1 NODE_4204_length_2030_cov_38.8363 . CDS 98 361 . + 0 ID=cds.g11529.t1;Parent=g11529.t1;5_prime_partial=true NODE_4204_length_2030_cov_38.8363 . three_prime_UTR 362 513 . + . ID=g11529.t1.utr3p1;Parent=g11529.t1 #PROT g11529.t1 g11529 DTTALLAQVPEQVRDLVLATLNNHIAEVKKTLEDELESQKATLMERIATLETRMGSESGGAALASIKASSGRLSSMSSKSSKRKGAK* # PASA_UPDATE: g11530.t1, single gene model update, valid-1, status:[pasa:asmbl_7096,status:12], valid-1 NODE_4204_length_2030_cov_38.8363 . gene 658 1825 . - . ID=g11530;Name=g11530.t1 NODE_4204_length_2030_cov_38.8363 . mRNA 658 1825 . - . ID=g11530.t1;Parent=g11530;Name=g11530.t1 NODE_4204_length_2030_cov_38.8363 . five_prime_UTR 1824 1825 . - . ID=g11530.t1.utr5p1;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . exon 1704 1825 . - . ID=g11530.t1.exon1;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . CDS 1704 1823 . - 0 ID=cds.g11530.t1;Parent=g11530.t1;5_prime_partial=true NODE_4204_length_2030_cov_38.8363 . exon 1328 1443 . - . ID=g11530.t1.exon2;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . CDS 1328 1443 . - 0 ID=cds.g11530.t1;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . exon 658 945 . - . ID=g11530.t1.exon3;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . CDS 825 945 . - 1 ID=cds.g11530.t1;Parent=g11530.t1 NODE_4204_length_2030_cov_38.8363 . three_prime_UTR 658 824 . - . ID=g11530.t1.utr3p1;Parent=g11530.t1 #PROT g11530.t1 g11530 NIAYPDQKVVTVGQFKIGLSHGHQIVPWGDLEALSLLQRQMDVDILITGHTHKCDTFEREGRFFVNPGSATGAYSSLTSDVVPSFVLMDIQGANVVTYVYTLHGDDVKVERIDYKKTA* # ORIGINAL: g5727.t1 original gene structure, not modified by PASA NODE_6696_length_523_cov_28.2746 AUGUSTUS gene 68 396 . - . ID=g5727;Name=g5727.t1 NODE_6696_length_523_cov_28.2746 AUGUSTUS mRNA 68 396 . - . ID=g5727.t1;Parent=g5727;Name=g5727.t1 NODE_6696_length_523_cov_28.2746 AUGUSTUS exon 68 396 . - . ID=g5727.t1.exon1;Parent=g5727.t1 NODE_6696_length_523_cov_28.2746 AUGUSTUS CDS 68 396 . - 0 ID=cds.g5727.t1;Parent=g5727.t1 #PROT g5727.t1 g5727 MDALTRNRGAIRCPERGCAADAYGVARIAELVSADVYTKLIDAQWRIKETEVVAHINAEFQRQREEERRRTVAAAEDHHRHISGSILTLKCPRCQAAFVDFVGCFALTC # ORIGINAL: g12014.t1 original gene structure, not modified by PASA NODE_1342_length_11886_cov_42.0652 AUGUSTUS gene 5946 7449 . - . ID=g12014;Name=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS mRNA 5946 7449 . - . ID=g12014.t1;Parent=g12014;Name=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 7027 7449 . - . ID=g12014.t1.exon1;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 7027 7449 . - 0 ID=cds.g12014.t1;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 6796 6886 . - . ID=g12014.t1.exon2;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 6796 6886 . - 0 ID=cds.g12014.t1;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 6472 6671 . - . ID=g12014.t1.exon3;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 6472 6671 . - 2 ID=cds.g12014.t1;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 5946 6317 . - . ID=g12014.t1.exon4;Parent=g12014.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 5946 6317 . - 0 ID=cds.g12014.t1;Parent=g12014.t1 #PROT g12014.t1 g12014 MLSARTVEPTPVVAPVEAMRKMSVAADKKCDTALAQLEQDEEPLLRENPGRFVLFPIQYPEIWKMYKKAEASFWTAEEVDLSKDVGDWERLKPDERHFVSHVLAFFAASDGIVNENLVERFSKEVQVAEARCFYGFQIAIENIHSEMYSLLIDTYIRDNQERAKLFNAVETLPCVRKKAEWAMRWISHKSASFAERIIAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFNLLKNKPSKDRVREIIANAVSIEQEFLTDALPVALIGMNNGLMRQYIEFVADRLLVALNCPKYYNSENPFDFMEMISLQGKTNFFEKRVGEYQKAGVMASKESQMFALDADF* # ORIGINAL: g12013.t1 original gene structure, not modified by PASA NODE_1342_length_11886_cov_42.0652 AUGUSTUS gene 151 4318 . - . ID=g12013;Name=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS mRNA 151 4318 . - . ID=g12013.t1;Parent=g12013;Name=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 3953 4318 . - . ID=g12013.t1.exon1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 3953 4318 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 3654 3734 . - . ID=g12013.t1.exon2;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 3654 3734 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 3232 3480 . - . ID=g12013.t1.exon3;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 3232 3480 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 2861 2975 . - . ID=g12013.t1.exon4;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 2861 2975 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 2518 2675 . - . ID=g12013.t1.exon5;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 2518 2675 . - 2 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 2000 2384 . - . ID=g12013.t1.exon6;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 2000 2384 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 1589 1829 . - . ID=g12013.t1.exon7;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 1589 1829 . - 2 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 1249 1359 . - . ID=g12013.t1.exon8;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 1249 1359 . - 1 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 1026 1131 . - . ID=g12013.t1.exon9;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 1026 1131 . - 1 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 393 540 . - . ID=g12013.t1.exon10;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 393 540 . - 0 ID=cds.g12013.t1;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 151 215 . - . ID=g12013.t1.exon11;Parent=g12013.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 151 215 . - 2 ID=cds.g12013.t1;Parent=g12013.t1 #PROT g12013.t1 g12013 MVSKTSLSPNKEGGSGTSPREDRSYKGDPNLTFAPKLNDNSMSLVRARRNTLPAGLTSPEKKAPYYDRELTFVPKINEHSAEMASKRTSNMSLLERLNRRASMTQAELYAARSALDVARRKKEEETSTSPTKSKEAEQQQPKQGESTRPIPVPIRLTNRSPPQRHKAFLICGPYADENVRSTLLSRGWVEKRRATDQLDLLWTLRPSDVDHKTLSKDHVMNHFRGSSEVTTKLGLCRNLKSLPWFDSTDPDTFYPRCHSLDNEEGREDFIEDFRTTAALCILRHHSELHVRGISVAVLKLALQAVNFWIRRRVHDDIDIDDSSALAMTEETLRVLVSHSYALTKQPQHKLLKNGAALTAAVKDRRPSAEDASTASTSDATKSDSSKSGEARTDAKAEVPKVEPVATEQHPGELNMDIECALRTARDMIPQYDLSGSRNVWIVKPGAKSRGRGIQCMNDMDEILRLADSDERKEERWVAQKYIENPLVIHGKKFDIRQWVLVTEWNPLTIWFYKDCYLRFSTDSFTLDDLDNKTIHLTNNSIQKCFDNFGTIDFAVGNMWSSDQFKEYLTETKRGSVYDEIVYPQMKQVAIWALQSAQDLIETRKNSFELYGVDFILDDQFRPWLVEVNSSPCLAASTPVTETLCAQVVEDTMKVIVDRRENPGADIGRWELALRQ # ORIGINAL: g12015.t1 original gene structure, not modified by PASA NODE_1342_length_11886_cov_42.0652 AUGUSTUS gene 8384 11801 . + . ID=g12015;Name=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS mRNA 8384 11801 . + . ID=g12015.t1;Parent=g12015;Name=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 8384 8599 . + . ID=g12015.t1.exon1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 8384 8599 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 8696 8855 . + . ID=g12015.t1.exon2;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 8696 8855 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 9022 9143 . + . ID=g12015.t1.exon3;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 9022 9143 . + 2 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 9287 9396 . + . ID=g12015.t1.exon4;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 9287 9396 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 9624 9822 . + . ID=g12015.t1.exon5;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 9624 9822 . + 1 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 10041 10095 . + . ID=g12015.t1.exon6;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 10041 10095 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 10344 10525 . + . ID=g12015.t1.exon7;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 10344 10525 . + 2 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 10679 10830 . + . ID=g12015.t1.exon8;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 10679 10830 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 11055 11153 . + . ID=g12015.t1.exon9;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 11055 11153 . + 1 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 11298 11511 . + . ID=g12015.t1.exon10;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 11298 11511 . + 1 ID=cds.g12015.t1;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS exon 11682 11801 . + . ID=g12015.t1.exon11;Parent=g12015.t1 NODE_1342_length_11886_cov_42.0652 AUGUSTUS CDS 11682 11801 . + 0 ID=cds.g12015.t1;Parent=g12015.t1 #PROT g12015.t1 g12015 MAMTTRDVTKFPPIVSTTSKSQALERHGQSQALSATERGSISPSKYAANPFVMPPDEEIFSLRDDERKRKKEERERSKNLKVHEKTTQSSRLNAKALLKDEDDVELREALEKHEELSNANMIMSHDRHVEKENLAEFIAKKREMFLVQYSLGVKRDEMRKLEEIAQAEEQKLANDEKALEEDAAKFDAFLKENDKNSVEAIKRAEAETKAKMEKVAEIKKINAQIMAIKSEMSKNEDQLKEYQLYKEFLDKLTPQDWFEEKKTEKRRRKEERAGRLSEGEKLSNNARAIKSPYGAQGKRATVKGAPGKVRTTLSASLTGSLSTVRDLNGDDDASVISGTEIDSDDDDEEPELYFTDPKQLLDIFAELEEQNLSLIQNSQETEEALEELKQKIAATQERMLKETESLKQQIEYLEGAIVREEEKARSLEERAKFFSFGVLGVEDQEKELEEMNRKVEEVYMHCIGDNEANISTLQMLTNIENRLEELFEAIELMPPDKVEQAEKMKEKERRQRQREEKLEMQRIHQEERVKRALQRAKEAPRKK # ORIGINAL: g12250.t1 original gene structure, not modified by PASA NODE_1974_length_8253_cov_43.5435 AUGUSTUS gene 887 7551 . - . ID=g12250;Name=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS mRNA 887 7551 . - . ID=g12250.t1;Parent=g12250;Name=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 7447 7551 . - . ID=g12250.t1.exon1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 7447 7551 . - 0 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 7107 7198 . - . ID=g12250.t1.exon2;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 7107 7198 . - 0 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 6819 6901 . - . ID=g12250.t1.exon3;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 6819 6901 . - 1 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 6371 6400 . - . ID=g12250.t1.exon4;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 6371 6400 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 6050 6175 . - . ID=g12250.t1.exon5;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 6050 6175 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 5440 5791 . - . ID=g12250.t1.exon6;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 5440 5791 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 5001 5099 . - . ID=g12250.t1.exon7;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 5001 5099 . - 1 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 4592 4706 . - . ID=g12250.t1.exon8;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 4592 4706 . - 1 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 4297 4413 . - . ID=g12250.t1.exon9;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 4297 4413 . - 0 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 3768 3949 . - . ID=g12250.t1.exon10;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 3768 3949 . - 0 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 2919 3279 . - . ID=g12250.t1.exon11;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 2919 3279 . - 1 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 2221 2758 . - . ID=g12250.t1.exon12;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 2221 2758 . - 0 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 1796 1960 . - . ID=g12250.t1.exon13;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 1796 1960 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 1307 1546 . - . ID=g12250.t1.exon14;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 1307 1546 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS exon 887 1074 . - . ID=g12250.t1.exon15;Parent=g12250.t1 NODE_1974_length_8253_cov_43.5435 AUGUSTUS CDS 887 1074 . - 2 ID=cds.g12250.t1;Parent=g12250.t1 #PROT g12250.t1 g12250 MASGGSIRRQHAVEDAKKVVAAVQGFLLQDDICLHAVEANIIQQDTRRVCILAIVTNSLTDGKEAALFVLKPVRTTFIVDTIMPILPSIMVAPETNDRIKRDLGAEMLFRVKLQTAREPGILVEITNHQKLKGFVAEVQRAVNVASQEHVMENRNTHLWIKGYQGDGESPSLTAATGTYGSNPNLTATATGATTTSSSNSAVESYFKSIDARHIDGPDVLINTYMARSAFEYNPQMLTKIKEEWIEKELKNRAAEFTQPKTVSVFCGTWNVNGQVPKEDLSPWFTCESLPDIIAIGFQELDLSAEAFVFNDSGREEKWTKVIEGSIKGIEQYTKLKSRQLVGMLLIVYVKTPHIPFIANIQSEVTGTGIMSVMGNKGGVAIRFRIYDSDLCFVNSHLAADSGRVDRRNQDYLDICRRTLFTGARNVQFTIFDADILFWIGDLNYRIPLPDGDVKQAIKNREFANLLVNDELNIERAALRVFVGFEEGPIDFVPTYKYDVGTDNYDTSEKQRTPAWCDRILWKGKNVTQLFYRSHQQMRGSDHKPVAALFDIKVQIVLNEKLQEVRQRIVRDLDKMENECMPDATISTNHIDFGEVHYMQPVTQTLVISNIGQVICQYRFIPKLDEKKFCKPWMWIEPPMGMIVPGNKAQIRFTVLVDNATVAAMNAGDDKVEDILILHLENGKDYFVSVTGNYLKTCFGMPLDDLSKKHGAIREPPPADHLIDLTDALKVAEPVPKEGRAHVPHEIWNLVDFVYQRGMDEENLFMTSGNTEEMVQVRDDLDVGRDLNARYSVHSVAETLIRLLEALPEPVIPFSHYQRCLDCCNSYVLCKQLITQLPPAHSETFVYLISFLRECLAHKERNLLSPEKIALLFGSVLMRSHKKEVAKYAEAVVTKKKATFIFNFLVDDDETAQRSPLPLTATPSAAPLIQF* # ORIGINAL: g9512.t1 original gene structure, not modified by PASA NODE_1203_length_13097_cov_39.5245 AUGUSTUS gene 7834 12863 . - . ID=g9512;Name=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS mRNA 7834 12863 . - . ID=g9512.t1;Parent=g9512;Name=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 10684 12863 . - . ID=g9512.t1.exon1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 10684 12863 . - 0 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 10363 10492 . - . ID=g9512.t1.exon2;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 10363 10492 . - 1 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 9782 9907 . - . ID=g9512.t1.exon3;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 9782 9907 . - 0 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 9464 9584 . - . ID=g9512.t1.exon4;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 9464 9584 . - 0 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 9088 9201 . - . ID=g9512.t1.exon5;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 9088 9201 . - 2 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 8569 8720 . - . ID=g9512.t1.exon6;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 8569 8720 . - 2 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 8217 8323 . - . ID=g9512.t1.exon7;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 8217 8323 . - 0 ID=cds.g9512.t1;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS exon 7834 7984 . - . ID=g9512.t1.exon8;Parent=g9512.t1 NODE_1203_length_13097_cov_39.5245 AUGUSTUS CDS 7834 7984 . - 1 ID=cds.g9512.t1;Parent=g9512.t1 #PROT g9512.t1 g9512 MAPEPQIPGPSSATQQQQQQQQQQQQQQGRVGTDQSPYGGMAFQQGGRGLAAFDGGVGPLIHSTLYSEGVLFLADALWEDRDRVTVVVPETRKIDSNPYASTTGGGTSRWARTESVVSFQVSGKTWAIAEASEVTSSVYSGSALGGPLRYAASLVSPVPELVSQHVTPPRRFLLLTNAGMHVLVRLRPVDVLQQILAESGGGRAAVTAVDDFSRAYGVDQLCAMCLIIATATPNALSAGRLAVGPRAPDQGVIHQASQLFFLRGAQINADGATNGSTERLGPAHFDMGGLVGSDVTCSAAHDGLCLHFARVLRPIWDRPLVVDGVFSCGIVRSEIVSASGRLTSLAAFLDRHPGFVGNEGSYNIQKRILETAEASQRRQVEEMMRREKNSLVSLRKLLSNCIEGLALLDALDAHGLSTLAAALPEDARAEAARTTFKDMVFNPRSSAVRLLVAAMVERTAAAGSNVDMVSELLSAKCPSYYGASDAIRHKALECMQRARVSAGGRGDQLRLLTEAADLYVSVAGDVDLSEVTRQFSQLSFPEGAVRVALARARVVDPQNLAVRYFDDRDPSGQSLFVQRSECYQSILSTLDDLWGPPQLRPGDPRAAVSQRDGGAAAGESLITLSPQQLQQDAAAARDRVLSMVLGTDDELLHAMLYDWFIAHGKSQTLLDLRTPFLEVHLRRIDASANEDESPTNDRRDLLWQYYVRCGSYGQAARILLRLAEKPGVFADLVRRIEYLSLAVSNAKSSRVRAAGAVDGDLLQELEEKLEVGRIQLVVFGAITALSADPRYDGEAVRRAIDDLNRGLFNISELYNRFVERFRLSEAALAVFHCSGHVDPPLVADLWAQITDEALRNLGSLAAVDVRIRALADKLQSLGARYYPSDNVFPVSLLVHLFEGYSSRFAQHEGSRDLSWVYESMLAAGVPFNVLFEVYNQLYRAEEAQHGAMRFHLLQVLSMILSRWADSSLSPSSPTNDRQLFRMSIVDISSAAAAYIIDLQTFAGAERETASRLTESFRAIQRRLDQL* # PASA_UPDATE: g9511.t1, single gene model update, valid-1, status:[pasa:asmbl_788,status:3], valid-1 NODE_1203_length_13097_cov_39.5245 . gene 4479 7492 . - . ID=g9511;Name=g9511.t1 NODE_1203_length_13097_cov_39.5245 . mRNA 4479 7492 . - . ID=g9511.t1;Parent=g9511;Name=g9511.t1 NODE_1203_length_13097_cov_39.5245 . five_prime_UTR 7373 7492 . - . ID=g9511.t1.utr5p1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . exon 7141 7492 . - . ID=g9511.t1.exon1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . CDS 7141 7372 . - 0 ID=cds.g9511.t1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . exon 6372 6906 . - . ID=g9511.t1.exon2;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . CDS 6372 6906 . - 2 ID=cds.g9511.t1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . exon 5948 6101 . - . ID=g9511.t1.exon3;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . CDS 5948 6101 . - 1 ID=cds.g9511.t1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . exon 5488 5628 . - . ID=g9511.t1.exon4;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . CDS 5488 5628 . - 0 ID=cds.g9511.t1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . exon 4479 4885 . - . ID=g9511.t1.exon5;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . CDS 4547 4885 . - 0 ID=cds.g9511.t1;Parent=g9511.t1 NODE_1203_length_13097_cov_39.5245 . three_prime_UTR 4479 4546 . - . ID=g9511.t1.utr3p1;Parent=g9511.t1 #PROT g9511.t1 g9511 MRQLDCNCLSLLAACLSVAIVLPHLQLASGADENALKAHILPPFRASTLIKPTLTAFVSAPQVQDGSTVTLTLVATKDSTGEKVILINTQLNVNERTELDVDVSHLTGKYVFDLAVSGTAHALSFDYEVVATGTNGTRLVDGCFIDIYHFSDDEAAYYNPQLLDMNADDWRDQMRFMSAAGIRTAILQAVFVNNMYVNADDNQTCEAYNGLAFYESALFPGRFGRFADKGDKITAILSAAEEFGMRIVIGIGNYAWFDYSNETLCWTLKVTKEIHTLYGQYRSFFGVYVTGEMAGDFWMESWPQASQYPAIVGTMETFFSTYRDYIHTEIDPTMPVMFAPNSYHWDQYAADWKRVLQHVDVLMPFGFARDPNWDTLNAILGVATATDTRVWVDMEMFAVQFPPLVPKSMEDLIAEIEKYDAVENVVGYEFTGIMDAPESRLHLGGDNATKLYVDYMEYYKSQIPSV* # PASA_UPDATE: g9510.t1, single gene model update, valid-1, status:[pasa:asmbl_787,status:12], valid-1 NODE_1203_length_13097_cov_39.5245 . gene 267 2963 . - . ID=g9510;Name=g9510.t1 NODE_1203_length_13097_cov_39.5245 . mRNA 267 2963 . - . ID=g9510.t1;Parent=g9510;Name=g9510.t1 NODE_1203_length_13097_cov_39.5245 . five_prime_UTR 2924 2963 . - . ID=g9510.t1.utr5p1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 2921 2963 . - . ID=g9510.t1.exon1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 2921 2923 . - 0 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 2439 2562 . - . ID=g9510.t1.exon2;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 2439 2562 . - 0 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 1924 2014 . - . ID=g9510.t1.exon3;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 1924 2014 . - 2 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 1508 1654 . - . ID=g9510.t1.exon4;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 1508 1654 . - 1 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 1204 1245 . - . ID=g9510.t1.exon5;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 1204 1245 . - 1 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 574 731 . - . ID=g9510.t1.exon6;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 574 731 . - 1 ID=cds.g9510.t1;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . exon 267 353 . - . ID=g9510.t1.exon7;Parent=g9510.t1 NODE_1203_length_13097_cov_39.5245 . CDS 267 353 . - 2 ID=cds.g9510.t1;Parent=g9510.t1;3_prime_partial=true #PROT g9510.t1 g9510 MNLQCQWSGGRKPIKELSASATLADLRGIIFSITSIEPERQKLLSGFPPKEVVADDDSVTVSSLGIRNGDSLRVDVREVARTDEPHASVVRRNVNGREEVVVRHDELSRVHPTDDVGSLMRRVVQSDNSCLFNSIGYLLISRTRDHAPILRQMIAETVSADPLTYNEAFLAMPNTAYRNWILDGKHWGGAIEISILSKHFQTEIAAVDIQTLRIDRY # ORIGINAL: g12328.t1 original gene structure, not modified by PASA NODE_1747_length_9428_cov_41.7604 AUGUSTUS gene 7085 8813 . + . ID=g12328;Name=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS mRNA 7085 8813 . + . ID=g12328.t1;Parent=g12328;Name=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS exon 7085 7102 . + . ID=g12328.t1.exon1;Parent=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS CDS 7085 7102 . + 0 ID=cds.g12328.t1;Parent=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS exon 7425 7745 . + . ID=g12328.t1.exon2;Parent=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS CDS 7425 7745 . + 0 ID=cds.g12328.t1;Parent=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS exon 8001 8813 . + . ID=g12328.t1.exon3;Parent=g12328.t1 NODE_1747_length_9428_cov_41.7604 AUGUSTUS CDS 8001 8813 . + 0 ID=cds.g12328.t1;Parent=g12328.t1 #PROT g12328.t1 g12328 MVRIARCNTPCSALDGHPSYGLGCLLPCACKNNATCNSVSGSCSCALGYTGDTCTQYSAPPAPTVNISSESSVSGVDLVLRWTVPQDTDANVAVAWPQWRFEVVGGCPPEVIALNGSVRSYRAVNVVVNQLYLYAVTAFNDKNVSSIISTVGIRPVKTARPAAPRVTLTATLATTAAGVQMPAVDIVWTEDVSSGPLLRTLVSRNGVNITLAVATNATEYRDFGVSASTRYTYVLVSQNVWGYSDAFVGQVTSLSATTASGVSASSGSTDTAALAGGVVGSIIGAAIAVSAVIFVRHRQAKRKREAIARSELELIDTVVRRPETAQLEVSGACIHMKSRIGEGEFGEVFQAEVDLGTKKVTAAIKTFKVTSLSSAEEIRSARR* # PASA_UPDATE: g9416.t1, single gene model update, valid-1, status:[pasa:asmbl_5355,status:12], valid-1 NODE_2991_length_4578_cov_35.7009 . gene 2 1959 . + . ID=g9416;Name=g9416.t1 NODE_2991_length_4578_cov_35.7009 . mRNA 2 1959 . + . ID=g9416.t1;Parent=g9416;Name=g9416.t1 NODE_2991_length_4578_cov_35.7009 . exon 2 130 . + . ID=g9416.t1.exon1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 2 130 . + 0 ID=cds.g9416.t1;Parent=g9416.t1;5_prime_partial=true NODE_2991_length_4578_cov_35.7009 . exon 416 549 . + . ID=g9416.t1.exon2;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 416 549 . + 0 ID=cds.g9416.t1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . exon 778 854 . + . ID=g9416.t1.exon3;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 778 854 . + 1 ID=cds.g9416.t1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . exon 1097 1212 . + . ID=g9416.t1.exon4;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 1097 1212 . + 2 ID=cds.g9416.t1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . exon 1447 1509 . + . ID=g9416.t1.exon5;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 1447 1509 . + 0 ID=cds.g9416.t1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . exon 1739 1959 . + . ID=g9416.t1.exon6;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . CDS 1739 1762 . + 0 ID=cds.g9416.t1;Parent=g9416.t1 NODE_2991_length_4578_cov_35.7009 . three_prime_UTR 1763 1959 . + . ID=g9416.t1.utr3p1;Parent=g9416.t1 #PROT g9416.t1 g9416 NDIAFIRGLDKDRLEKLHTLSLRGNKLNHTGGISVPGLKNLYLGGNLIDHIEEMNLRFLERLHLRDNMIANLDGFSRSLASLTYLNLRKNKIAALSEVGKLNVLPSLKALVLLENPVTEVDDYRMEVVILLRSLTSLDKEEYSEEEHADAEQIIQEREETARLLAQQSSDPQQDDGGDRA* # ORIGINAL: g9417.t1 original gene structure, not modified by PASA NODE_2991_length_4578_cov_35.7009 AUGUSTUS gene 2595 3600 . - . ID=g9417;Name=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS mRNA 2595 3600 . - . ID=g9417.t1;Parent=g9417;Name=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS exon 3430 3600 . - . ID=g9417.t1.exon1;Parent=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS CDS 3430 3600 . - 0 ID=cds.g9417.t1;Parent=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS exon 3190 3285 . - . ID=g9417.t1.exon2;Parent=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS CDS 3190 3285 . - 0 ID=cds.g9417.t1;Parent=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS exon 2595 2741 . - . ID=g9417.t1.exon3;Parent=g9417.t1 NODE_2991_length_4578_cov_35.7009 AUGUSTUS CDS 2595 2741 . - 0 ID=cds.g9417.t1;Parent=g9417.t1 #PROT g9417.t1 g9417 MDEHRHPQAVEESEKCANGTGEVSTAPNATPYKWQLLTDAEKEKFRAKSKKTLKKLQADVCKNLACPLCPGIAFTSLQTYDAHVTSKRHWRHLEGRRHSDRVRRTLTRLSTHRPPYSIVEARALDVAETLEEGEEDS* # ORIGINAL: g9785.t1 original gene structure, not modified by PASA NODE_1568_length_10441_cov_41.2422 AUGUSTUS gene 6589 9885 . - . ID=g9785;Name=g9785.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS mRNA 6589 9885 . - . ID=g9785.t1;Parent=g9785;Name=g9785.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 6589 9885 . - . ID=g9785.t1.exon1;Parent=g9785.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 6589 9885 . - 0 ID=cds.g9785.t1;Parent=g9785.t1 #PROT g9785.t1 g9785 MSQDGKPLQEQQATVTPSVPALTAGSTPTTAMGLVAEEVAPTGDQHHNAGTHYHSRNSTTPGVEPAEVNGIRDVEAPSSTRSDYVAVHHPRSAFVRGLTAPIVGFRRLPIVHKHVILFCIVQCFLILIIGLQVYFLYHDSREILKEQAASELQLTDITFNIKFDQMSFGFRGQSSNPAFREYAIAPGVNYTYDAVKAILVNEVTTRQMEFASLLSPAAVILVGSNANRTGQVLNPGGIITQAVTKKTQIRVASILSYAEYLAESPPVYREKVDDYSPASTYHPIDTKMPSVIRYTATPIIATNGSGAVVGVLLSGDIVNGKLPIVHNIVNAFQGGFSGVYFYDWRTVGAVPQVITTAFTDESFACLMANVEFAPRRDIMVSVAQGPAGAVVVYRTSVAGSPVTVAVKQYSGLNGTFFVRATLEESSDADLHDSVVINCAFGAATLVVDALAMYLLYVAFIFPMLLLHDKMRRGLFSVGDVVAVTSTDDLTEAEAAQAAQENGGDAKAKDLDRHDEIGKLIFMYKKMVEAIRFHEKVASLRDRMFQVFSMDDAKAKQVAVLSRRKPALEHSRSNLLAVLRRPFVHKILLQDSKIRIRSNIKVVVTNIIAVSMIAVQIWLTYQSTFDAVARQTASEVNIGSITFALKINQMGFGFRGNSDNTAVRTAVDGGASPATLATVVALLKQEITTRKMEYATLVAADTTIIASGNALRVGQSFNPSGVVTEALSQRKQVKLVATITRSEYLSELPPIWQEKLVATVADSSLQPNATRASELLIRWTATPVYGYTAPSGPPLGVLVSGDIVNGKTIMMERILGAVDTGYAGIAYVGSDGVIRTATGIYIAHKGGVVDVDQLSPAGAYQSQILKAMQSGQTVTLRSSHYGGMTYSIKPVKSKTLNNVPAASPTIVVLIRGTKETDASHRLTGHYIFHCVSFAFIVGFQLLTGFYLSLLCYRPLRALAVGLLVKHLGLQTNSDKHPAAVYLRALEEETPYDTKTRDEVAWIVHAFKELSRIVERLGLDAELRADEDDVPLTMHVRVEGAVGEEGGTGDADADNGQTPLRTAKMTPLNAPGMMSPTTGRPLLSANDGFVAKDSIMNLHF* # ORIGINAL: g9784.t1 original gene structure, not modified by PASA NODE_1568_length_10441_cov_41.2422 AUGUSTUS gene 669 5658 . + . ID=g9784;Name=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS mRNA 669 5658 . + . ID=g9784.t1;Parent=g9784;Name=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 669 707 . + . ID=g9784.t1.exon1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 669 707 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 1208 1376 . + . ID=g9784.t1.exon2;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 1208 1376 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 1639 1916 . + . ID=g9784.t1.exon3;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 1639 1916 . + 2 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 2227 2319 . + . ID=g9784.t1.exon4;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 2227 2319 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 2665 2826 . + . ID=g9784.t1.exon5;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 2665 2826 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 3167 3419 . + . ID=g9784.t1.exon6;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 3167 3419 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 3600 3793 . + . ID=g9784.t1.exon7;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 3600 3793 . + 2 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 4347 4371 . + . ID=g9784.t1.exon8;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 4347 4371 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 4725 4909 . + . ID=g9784.t1.exon9;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 4725 4909 . + 2 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 5142 5343 . + . ID=g9784.t1.exon10;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 5142 5343 . + 0 ID=cds.g9784.t1;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS exon 5549 5658 . + . ID=g9784.t1.exon11;Parent=g9784.t1 NODE_1568_length_10441_cov_41.2422 AUGUSTUS CDS 5549 5658 . + 2 ID=cds.g9784.t1;Parent=g9784.t1 #PROT g9784.t1 g9784 MADTEVVADTALEAPVDGADSSLPLDVSVKRPRENGDDASDAPAAEGDGQPRKRERRRKNMWDAPASGEAPIGAGVPESQLPQEQQMKLKKAREFAALQSTIIANAIMRGGPIPMPIPLPGAHSLLPAPMPGMMMGGGMFPHPMGAPMGAPAGPTPEQLKMQENAAKLRAMQQMARLYVGSIAFDLAEANMRELFAPFGVLKTVQMSHEPTTGKHRGYCFVEYEMYEGAVLALEGMNNANIGGRSLKVGRPQNAPAPTPLFEEVVRESESKARVYVANIHAELNESDIKSVFEAFGSIVSCNLIPDQGAPGKHKGVGFIEYESMQSAKDAIASMNNFDLGGQLLKVAKAVTPLTLLPSNLAVAQVSAAQQLAMQAAAAVASKLPMTTTSTAAAPGQSSMAQLIEGAAPLNGGIPTPADVQAKMAKITEETMRKKEDTLDNEESMSIKGTTQRHLLMQKLAQRATDDDVTSRLVILRNMVGPEDIDESLNGEVAEECEKYGGVTRVHVTTDMRALLARPDETPVKIFVMFNSTTAAQKAVDGLNKRWFAGRQVRAEPYSEQRFLAGDYSG* # ORIGINAL: g5439.t1 original gene structure, not modified by PASA NODE_1849_length_8934_cov_34.5187 AUGUSTUS gene 259 5355 . - . ID=g5439;Name=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS mRNA 259 5355 . - . ID=g5439.t1;Parent=g5439;Name=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 5035 5355 . - . ID=g5439.t1.exon1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 5035 5355 . - 0 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 4830 4902 . - . ID=g5439.t1.exon2;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 4830 4902 . - 0 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 4167 4258 . - . ID=g5439.t1.exon3;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 4167 4258 . - 2 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 3563 3751 . - . ID=g5439.t1.exon4;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 3563 3751 . - 0 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 3228 3300 . - . ID=g5439.t1.exon5;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 3228 3300 . - 0 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 2502 2551 . - . ID=g5439.t1.exon6;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 2502 2551 . - 2 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 2111 2223 . - . ID=g5439.t1.exon7;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 2111 2223 . - 0 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 708 1610 . - . ID=g5439.t1.exon8;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 708 1610 . - 1 ID=cds.g5439.t1;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS exon 259 382 . - . ID=g5439.t1.exon9;Parent=g5439.t1 NODE_1849_length_8934_cov_34.5187 AUGUSTUS CDS 259 382 . - 1 ID=cds.g5439.t1;Parent=g5439.t1 #PROT g5439.t1 g5439 MAVIRSGGAVGFYSGSIALLEGDIHALNPTLFVSSPRIYNTFYERFLEHYAAHHGTGLTEAEKASRAMDAVRSILGTRMRLIISGGAPLSPAVHDFLLNCFRCRVLQTYGLTETGVATVGDEVDSIGKAVPGLDFKLAPIESMGHNGVTSGELCFSGPPVFQGYLKADDKTRECMEGRWFHTGDVGVILPSGNIRIVDRIKNLFKLSQGEYISAERLENVYLRSTFVSQNFVHGHTSEDCVVSIVHPNEVNLRRWYAREVNAAHVETMSLIQLCSDEQCVRAVIADLHRIAKESELEPYEVVRRIRLVPEAFTVINGLLTPSFKINRPECIKKYDSEVSKLYAEMRDARKRAREEDAATLTSNVTTISAADAFPLVRRAFARTLGFDNADDVETDASFFSLGGDSVAATTLTAILNASFPTALLTATRVWDAPTVNAMSSLVASAVSGQLSSLSSGVTLSTLRENADRVAASLLPSEEARTKRRRMDNESSESGDGILLTGATGFVGAFTLSALLATGNEKIYCIVRASTDADALVRLKKVLEGYKLSVDGRVMDARVAVVAGDVARDLFGLSGDAYDALALKVDRILHLAAEVNLVRPFHTLEKANVGGTANVIKFAMHGGRMRRLHYTSTVAIFSGYPAGDIYE # PASA_UPDATE: g556.t1, single gene model update, valid-1, status:[pasa:asmbl_2933,status:12],[pasa:asmbl_2935,status:12], valid-1 NODE_1892_length_8712_cov_40.9239 . gene 2513 8597 . - . ID=g556;Name=g556.t1 NODE_1892_length_8712_cov_40.9239 . mRNA 2513 8597 . - . ID=g556.t1;Parent=g556;Name=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 7881 8597 . - . ID=g556.t1.exon1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 7881 8597 . - 0 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 7417 7776 . - . ID=g556.t1.exon2;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 7417 7776 . - 0 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 6899 7282 . - . ID=g556.t1.exon3;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 6899 7282 . - 0 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 6540 6691 . - . ID=g556.t1.exon4;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 6540 6691 . - 0 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 5916 6380 . - . ID=g556.t1.exon5;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 5916 6380 . - 1 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 5540 5773 . - . ID=g556.t1.exon6;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 5540 5773 . - 1 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 4891 5378 . - . ID=g556.t1.exon7;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 4891 5378 . - 1 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . exon 2513 4728 . - . ID=g556.t1.exon8;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . CDS 2645 4728 . - 2 ID=cds.g556.t1;Parent=g556.t1 NODE_1892_length_8712_cov_40.9239 . three_prime_UTR 2513 2644 . - . ID=g556.t1.utr3p1;Parent=g556.t1 #PROT g556.t1 g556 MDTPPYGQLRPSKSETRTPTGMSARSREHKPSVGERALFFLFPVLNAVAVKDSASSGWIFTAMAVEFLQLLQFPMSTTRALPWKYGSMHWFAALCNVIGIQPHFFHNNSGAFYASVAVTTLLICNVLIAAHLLAVPNPSRYSKWAVTSLRAFGRMMVSIAFIPVLGTLLSTVSSCNSGETTCTSTPENIAQTVVGVTLSAAFAAMSIVWVATVYEPDPSKRTVARRAHARMDVAVLIVKVTLTSLFTVGTDSLNQWAYVGAVGVCSVGLAVGFVCFPPHYSRRVGLVRACSMWLFAWASLCLLFETVFGDPDIPDVYYMYFITTPIVVCACTLTARFRRQQLIACRVDKTCHVFEVELKVRFLLEDSQLLDASPEAMTSAEESRARECYALANQMYADAAKKYPESVFLRLFWSRLMLSYTRNRSLAKSRLGKAATGSPLIDLRYAVYAALKEIDGSASRKDTVQLVEARRLMARAHASQGRVARLQVVLWSELTQRTTRLTTLHRLASSIASSITAATECYEKLIRIAPDNKEVLQSYAGFQMNILNDSEMGMELLDKAGECVDFHAEHGEAEDDIMQDEAQQYSQQSGDGMVRAQPMRLLSTYSLTDGQSATVTISGVRGKEGVFVDVNAAGCCLLGYRRADLIGRNVTAVIPTPFLSTSHSLAIRKYVEMGEGNFSMNRDQPRMLPVLHKSGHILAAYLEIKQANYGPDGAIAFVGTIRPLTTRAHFILVDASGSVSAASAAIDTVFRGLGEHVRGGQRVAMDEVLPGFASMPCDGVARQITTEMDGETRTFSTRLLRIEWSTGAGMTAEVTADKSAHKPCHATLVKVQLEEGETVPLSRSETVTNGYSLSMATRDAHGSMSIERNFAASVAHLSETNGITDNSQNNCHSSENAMEVREPFFGGKVPVLQRQTKVSILEGIVEITAVNTKGDKSAGCRAIDSADVSGDSGASSSSDHRHESIAIDIASVPEQDERIAVCKKEDAFGDDISANRRPRRTSIAGSHRSSEQSRRTESSSQLRRRLLQGGASNGLTRLSKFILAGFLAIVVGGSIAAIAARQLTSTKINGLDETYAAIVVSSDRLQKAVRLLFEVRTLMLPNATAFASVQSILDTQLAVRDRSVLMTDANSQLMASSVTLHDVAQMIFKTQPIVPWTEISVTGKRTDVSITMTDAVERFAMLATQLSYLNLSQVAGTAAAEEIMLNTPTKLLPVLVRSTDTYEASIALTLSEARDAVWMTTIVPLVLFVAVGLGIILPLLATVEARRNKVARLFMLIPSSVSSCMYERSRQTAETLAEMNGEDDLDGEEDLEYEETMGRRLDDKGGESSKRRSDARSMPTINQAYSRRARVASFFKMQRRGLLCIAAVLLPIIIYFPVRHASFETASAGVTSTAMGLDLSDVRRFYMYNMAIEAREVVVAATRADFEAHRTALQAHADAMDAINHRLLYGDDTVQPATREHMPLLFNNSCVDSSPAGCTAFHSGIVARGLMPTQIEFMRVAKRIADVLENASFPLSSAKVVSMAKSTDMVDVFKFALKYLRAALFASSDIYKASQDGSITNYMSRMATLLGVYIAVLVLVFVAVVRPFVRRLNGDMAHLHLALAIVPGDVLFQIEGARAYVSCHLLS* # PASA_UPDATE: g555.t1, single gene model update, valid-1, status:[pasa:asmbl_2934,status:12], valid-1 NODE_1892_length_8712_cov_40.9239 . gene 227 2295 . - . ID=g555;Name=g555.t1 NODE_1892_length_8712_cov_40.9239 . mRNA 227 2295 . - . ID=g555.t1;Parent=g555;Name=g555.t1 NODE_1892_length_8712_cov_40.9239 . five_prime_UTR 2073 2295 . - . ID=g555.t1.utr5p1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . exon 2057 2295 . - . ID=g555.t1.exon1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . CDS 2057 2072 . - 0 ID=cds.g555.t1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . exon 1803 1904 . - . ID=g555.t1.exon2;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . CDS 1803 1904 . - 2 ID=cds.g555.t1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . exon 1246 1637 . - . ID=g555.t1.exon3;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . CDS 1246 1637 . - 2 ID=cds.g555.t1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . exon 658 848 . - . ID=g555.t1.exon4;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . CDS 658 848 . - 0 ID=cds.g555.t1;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . exon 227 427 . - . ID=g555.t1.exon5;Parent=g555.t1 NODE_1892_length_8712_cov_40.9239 . CDS 227 427 . - 1 ID=cds.g555.t1;Parent=g555.t1;3_prime_partial=true #PROT g555.t1 g555 MHSLKAKQSAPVGNSYSQRYTNHGTNNGNHAVRASGASRAVNSVRTSHNAPQQRSPIAGARLPSLSHASHPAASDSIQSFQGGPAAPSHQYLPPNLPLSEVSLLRSVADANTFLDLILVTYAEHAGMEIYDVLDTFNHPERGISAVIMNGMGTAGDFGFVVRWLQDLFANVKLLVQMVDADDAGLAATLSILAPGFYSFSHDVVLWTCRIFARIGFHFCSAQSDGARSEEAWEWFVSPGGGLDGVLAALRRHVDIKVALFPVLHVFSRGREQSLYASQLTAALPEPQSYIGVVHEFLVSE # ORIGINAL: g2964.t1 original gene structure, not modified by PASA NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS gene 261 913 . - . ID=g2964;Name=g2964.t1 NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS mRNA 261 913 . - . ID=g2964.t1;Parent=g2964;Name=g2964.t1 NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS exon 851 913 . - . ID=g2964.t1.exon1;Parent=g2964.t1 NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS CDS 851 913 . - 0 ID=cds.g2964.t1;Parent=g2964.t1 NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS exon 261 596 . - . ID=g2964.t1.exon2;Parent=g2964.t1 NODE_4972_length_1106_cov_42.6557_potentialcontaminant AUGUSTUS CDS 261 596 . - 0 ID=cds.g2964.t1;Parent=g2964.t1 #PROT g2964.t1 g2964 MVQTWKWFQSSCGVRVYKGMEIIYANEVGARGRLRVPLPAKVVSIISIPHPQRGESSGYFECEDEFRLNRFFIQTANVTWDKMKADQKNNKPANMKAAHKKLKELVTPVKIWLESASVRGVAMHIFLPLISA* # ORIGINAL: g3033.t1 original gene structure, not modified by PASA NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS gene 538 1096 . + . ID=g3033;Name=g3033.t1 NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS mRNA 538 1096 . + . ID=g3033.t1;Parent=g3033;Name=g3033.t1 NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS exon 538 668 . + . ID=g3033.t1.exon1;Parent=g3033.t1 NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS CDS 538 668 . + 0 ID=cds.g3033.t1;Parent=g3033.t1 NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS exon 1015 1096 . + . ID=g3033.t1.exon2;Parent=g3033.t1 NODE_4677_length_1340_cov_32.4743_potentialcontaminant AUGUSTUS CDS 1015 1096 . + 1 ID=cds.g3033.t1;Parent=g3033.t1 #PROT g3033.t1 g3033 MQVTMNKGLIGKTYKTDAQTIITHLEKTEDSALAALKEKLETEGKATIAINGKDFVIDGLHPARREADYR* # PASA_UPDATE: g931.t1, single gene model update, valid-1, status:[pasa:asmbl_5658,status:3], valid-1 NODE_3164_length_4136_cov_36.1921 . gene 510 3172 . - . ID=g931;Name=g931.t1 NODE_3164_length_4136_cov_36.1921 . mRNA 510 3172 . - . ID=g931.t1;Parent=g931;Name=g931.t1 NODE_3164_length_4136_cov_36.1921 . five_prime_UTR 3016 3172 . - . ID=g931.t1.utr5p1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 2950 3172 . - . ID=g931.t1.exon1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 2950 3015 . - 0 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 2671 2765 . - . ID=g931.t1.exon2;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 2671 2765 . - 0 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 2377 2456 . - . ID=g931.t1.exon3;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 2377 2456 . - 1 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 1757 2157 . - . ID=g931.t1.exon4;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 1757 2157 . - 2 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 1382 1507 . - . ID=g931.t1.exon5;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 1382 1507 . - 0 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . exon 510 1023 . - . ID=g931.t1.exon6;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . CDS 694 1023 . - 0 ID=cds.g931.t1;Parent=g931.t1 NODE_3164_length_4136_cov_36.1921 . three_prime_UTR 510 693 . - . ID=g931.t1.utr3p1;Parent=g931.t1 #PROT g931.t1 g931 MRETPLSNSERTFVTDALKAGQRLDGRGTYDYRRVQLTFPGPLGLAEVQIGKSRAMAQVACDLVRPFPDRPSEGMIAFNIEMGPIASPAFEAGRPSDQSVEISRIIERGIRESRAIDTESLCVVSGVAVWSLRIDIHALDDGGNLLDATHLAAIAALCHFRRPEVSVVGGQASVYAEHERDPVPLAMHHVPLAVTIGFLEEGHLVIDASAKEERVLAGSLTVTMNAHKEICLMHKSGSVTLLPDQTMRCVKIAAVKVIEMNELVQSALKQSAERRADKTSGLPKLVTVTSTGSSMVPDVPRSVSVTENASSRREVIEADDSAMEVDDDNGEDKETIVTLGKGTATTTKTPKTKKGAASTPGKKGW* # ORIGINAL: g9490.t1 original gene structure, not modified by PASA NODE_2085_length_7820_cov_36.9078 AUGUSTUS gene 873 3264 . - . ID=g9490;Name=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS mRNA 873 3264 . - . ID=g9490.t1;Parent=g9490;Name=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS exon 2805 3264 . - . ID=g9490.t1.exon1;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS CDS 2805 3264 . - 0 ID=cds.g9490.t1;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS exon 2484 2622 . - . ID=g9490.t1.exon2;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS CDS 2484 2622 . - 2 ID=cds.g9490.t1;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS exon 1436 1938 . - . ID=g9490.t1.exon3;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS CDS 1436 1938 . - 1 ID=cds.g9490.t1;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS exon 873 1201 . - . ID=g9490.t1.exon4;Parent=g9490.t1 NODE_2085_length_7820_cov_36.9078 AUGUSTUS CDS 873 1201 . - 2 ID=cds.g9490.t1;Parent=g9490.t1 #PROT g9490.t1 g9490 MAEAPAAPASDGAHIVRVRGIPFSATEEEILNFFRTCSIKRAPPCESGVYIVKFADGRPTGEAYVFLEGPEDETKALALSRQYLGHRYVETFRATTVEYEFALKKQQQPAPAPYGDASGMPHFANRHAAKDFLVRLKGLPYTVTKKDVETFFAGIEMSPYGVTIVQDALGNPTGEGFVEFPTVELQQEALLRHKAHMGSRYIEVFLSSPDEYRIILDSRTTRQGYFRPKMYGHEQPYPGFREYDYSPYARPYDRPMRGGFGGYAPRGPVPYSPYARPPAPSGPYGRPEPYNHEPRGHRPSATGLTVRMRGIPFRSTKQDVERFFAPIRVVDIRFKFDNMGRPAGEAFADFATDADVREALTRNKKELDHRYVELFREDGFQPGAAAHAHVHANAAPGGYGHYNPYDPRGDSDRMGMGVQPAAAAAAAAAAAAVAAASFPAYQGVDPMGYYGASGAGGYAPPVSAYFNHGYDTRGYQ* # PASA_UPDATE: g9491.t1, single gene model update, valid-1, status:[pasa:asmbl_3458,status:12], valid-1 NODE_2085_length_7820_cov_36.9078 . gene 4425 7760 . + . ID=g9491;Name=g9491.t1 NODE_2085_length_7820_cov_36.9078 . mRNA 4425 7760 . + . ID=g9491.t1;Parent=g9491;Name=g9491.t1 NODE_2085_length_7820_cov_36.9078 . five_prime_UTR 4425 4617 . + . ID=g9491.t1.utr5p1;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . exon 4425 6436 . + . ID=g9491.t1.exon1;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . CDS 4618 6436 . + 0 ID=cds.g9491.t1;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . exon 6542 6744 . + . ID=g9491.t1.exon2;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . CDS 6542 6744 . + 2 ID=cds.g9491.t1;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . exon 6935 7760 . + . ID=g9491.t1.exon3;Parent=g9491.t1 NODE_2085_length_7820_cov_36.9078 . CDS 6935 7760 . + 0 ID=cds.g9491.t1;Parent=g9491.t1;3_prime_partial=true #PROT g9491.t1 g9491 MAKGGRRSQNGARWQFSVAVIFALITMSVLFVSLVQPADSQFLDVLSAQTLAVQSGPVFTTNASRMWFDSTGCYVDGKACPPAVYWTLECGPCNENQYFFALGNVINMTEKDAVFSLAPDTFLLPYPYIPSGVEKGTWAPNTYASGTVMIVVSQGRIVLPKRTGVFAANRGYGGGGGGAGEYFYFNNTICNSSQVIPTGGYVGAFSTGMDGELGYAPGSGQELNADNQYTQSRDHYSERCVGYGGRGGGNGGFYGGGANGSIAGSTFVSAGLAGGRGAGPYGGRGGVAANRLNSCVSAGSDGREASGGAGQPGGYLGVGVNGETQQQADSNDNVYIGGGGGGGSGGRSSGPFCCGGGAGGVGGALTVRGSVGCAAGAGGNGGAIGGGAVVLTAQDIDFDGEIHASGAGSYTPGAAKGGYGAGGGVLIKATGTLTLGPHIVIESLGANSVISATQAITENGGTVKLRGSVIANASNIASAVSAGRLSVVYTTSIQDPTKPVGEVISAAQIAAAAGPVTIAGSNVWFNSSGCFADGKACPDAVRYTLGCGPCSGNNYYYDLAVPINLTTPGVVFTVLPGVFLRPYSFYPKNKNFIYSNTWAPFSVGGTGVLSITAVDGTINIPEGSGLIASYTGFGGGGGGSGEMFAENATLCDASQVRTSGGETEAFSGGLDGTKGYSPGNGFKLDSDQLSIQTQFSLREPCVGYGGFGGARGGFFGGGSSLRTPLTSILTPYTLEGGRGAGPFGGAGGKFSVANSRCARGIIGNEASGNDGSAGGYLGVGANGEAQPDNSDNVYLGGGGGGGSGGRASGVDSKKNCCGGGAGGAGGLAGAVASKGCSSGAGGSGGGAGGGAIVIVAREINFGGTAESNGAGSARAGAGFGAGGGILIKASKTLTVGNKARFSSLGGQSVNTGEGGTTANGGTIKLRGSTIVAAANLTLQVSAGAVSVVT # ORIGINAL: g9890.t1 original gene structure, not modified by PASA NODE_2717_length_5362_cov_46.9552 AUGUSTUS gene 156 990 . - . ID=g9890;Name=g9890.t1 NODE_2717_length_5362_cov_46.9552 AUGUSTUS mRNA 156 990 . - . ID=g9890.t1;Parent=g9890;Name=g9890.t1 NODE_2717_length_5362_cov_46.9552 AUGUSTUS exon 156 990 . - . ID=g9890.t1.exon1;Parent=g9890.t1 NODE_2717_length_5362_cov_46.9552 AUGUSTUS CDS 156 990 . - 0 ID=cds.g9890.t1;Parent=g9890.t1 #PROT g9890.t1 g9890 MYGFWRASRTAWRWNVGILAAITIILFTAVIPNVKRDTDPNNARLELENIAGLHLQRDLGKDDTQSSSLTHDDNTKLDVAGGPDGERDDENTSENELVGDTDVTDETGAMEEKEREEPDDTIVTEADGVAPAPARDNPSLHIDDAVIDKPPPGTQPSAACNVTRHRLGYLNDDAMWETTANGRIPRSETCVGKDQRGRWDDLVFESLTCKREIFDVTEAIACISSMPSKWIVLLGDSNSRRTFNTFSKLFAGIDYDDNRVPVSYEGEIINVHEMYSFD # PASA_UPDATE: g9891.t1, single gene model update, valid-1, status:[pasa:asmbl_4879,status:13],[pasa:asmbl_4880,status:12], valid-1 NODE_2717_length_5362_cov_46.9552 . gene 2657 5185 . - . ID=g9891;Name=g9891.t1 NODE_2717_length_5362_cov_46.9552 . mRNA 2657 5185 . - . ID=g9891.t1;Parent=g9891;Name=g9891.t1 NODE_2717_length_5362_cov_46.9552 . five_prime_UTR 4617 5185 . - . ID=g9891.t1.utr5p1;Parent=g9891.t1 NODE_2717_length_5362_cov_46.9552 . exon 4558 5185 . - . ID=g9891.t1.exon1;Parent=g9891.t1 NODE_2717_length_5362_cov_46.9552 . CDS 4558 4616 . - 0 ID=cds.g9891.t1;Parent=g9891.t1 NODE_2717_length_5362_cov_46.9552 . exon 2657 4305 . - . ID=g9891.t1.exon2;Parent=g9891.t1 NODE_2717_length_5362_cov_46.9552 . CDS 3033 4305 . - 1 ID=cds.g9891.t1;Parent=g9891.t1 NODE_2717_length_5362_cov_46.9552 . three_prime_UTR 2657 3032 . - . ID=g9891.t1.utr3p1;Parent=g9891.t1 #PROT g9891.t1 g9891 MSARLEDTNCRELAEHTLDTARMLERIAGRLSTVLSTPNQGAAGKDGVPDNHSGGPVRFDHEFHTHTCNVEALLARYDCGTHSNDFRAAPTTRAECTCRRQPGQDLLTDTTAGNDGDHVPMDVLDQAGPTVTSSQPPRQQQAVSTHTISSDTSKPMSPGMSPSLLRGSTQQSPQLEFTSAIANNDVTGASPIAAQHPQPRALSAHSETDRNRPVEVEEDDGALPPAACHAPVDATITDSSLVRHRSASFRVSRAGTLQFDVQMPGNASSSPMQTPPESMLRVALTPPTMSSGVDSGESGMPGAGDGHVPSGQNHPGLVTPFARHVNSRSVVSDVAGDSAVVIDDDACHVTDAPMSDGTNGPDVVTASHIVLGVSPTAEEKSASGRRTFLLSPSLNEAIDIEADAAALNDPGDQAVGSAGDSPCCDGSPFTEDFRARCNSDHSV* # ORIGINAL: g2615.t1 original gene structure, not modified by PASA NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS gene 2 171 . + . ID=g2615;Name=g2615.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS mRNA 2 171 . + . ID=g2615.t1;Parent=g2615;Name=g2615.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS exon 2 171 . + . ID=g2615.t1.exon1;Parent=g2615.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS CDS 2 171 . + 2 ID=cds.g2615.t1;Parent=g2615.t1 #PROT g2615.t1 g2615 PDSFLKNFDTTLDPLFRLLVVDTVFNCGDTESKDFNESRQLLKRRDVVLCHFFGQ* # ORIGINAL: g2616.t1 original gene structure, not modified by PASA NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS gene 1615 2013 . - . ID=g2616;Name=g2616.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS mRNA 1615 2013 . - . ID=g2616.t1;Parent=g2616;Name=g2616.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS exon 1615 2013 . - . ID=g2616.t1.exon1;Parent=g2616.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS CDS 1615 2013 . - 0 ID=cds.g2616.t1;Parent=g2616.t1 #PROT g2616.t1 g2616 MNEHEFIVRSVKVLDIGFITMLFFVIGLLCATVFDKLLGKFDEEANKKKTTPRLLIELLGHVWVIGVTWYIVRNVVELIPSPFDGVQGFDHSKMKELTNSSTFMTVFMIFQDNLRLKVKLCYDRLNGNAVCI* # ORIGINAL: g2617.t1 original gene structure, not modified by PASA NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS gene 2279 2510 . + . ID=g2617;Name=g2617.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS mRNA 2279 2510 . + . ID=g2617.t1;Parent=g2617;Name=g2617.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS exon 2279 2510 . + . ID=g2617.t1.exon1;Parent=g2617.t1 NODE_3923_length_2510_cov_26.6612_potentialcontaminant AUGUSTUS CDS 2279 2510 . + 0 ID=cds.g2617.t1;Parent=g2617.t1 #PROT g2617.t1 g2617 MSPSVLSNHGSVLDSLNGHGILGTSLNLLVVITIEESKLIITTLIKEAEQWMRKHTSNVYFIVDFVRQVRRMISNMV # PASA_UPDATE: g1847.t1, single gene model update, valid-1, status:[pasa:asmbl_6114,status:12], valid-1 NODE_3483_length_3365_cov_42.3787 . gene 10 1304 . - . ID=g1847;Name=g1847.t1 NODE_3483_length_3365_cov_42.3787 . mRNA 10 1304 . - . ID=g1847.t1;Parent=g1847;Name=g1847.t1 NODE_3483_length_3365_cov_42.3787 . five_prime_UTR 1258 1304 . - . ID=g1847.t1.utr5p1;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . exon 1111 1304 . - . ID=g1847.t1.exon1;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . CDS 1111 1257 . - 0 ID=cds.g1847.t1;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . exon 812 1015 . - . ID=g1847.t1.exon2;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . CDS 812 1015 . - 0 ID=cds.g1847.t1;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . exon 10 708 . - . ID=g1847.t1.exon3;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . CDS 274 708 . - 0 ID=cds.g1847.t1;Parent=g1847.t1 NODE_3483_length_3365_cov_42.3787 . three_prime_UTR 10 273 . - . ID=g1847.t1.utr3p1;Parent=g1847.t1 #PROT g1847.t1 g1847 MNGKYPLIDNSCSVSVASAAASAMDELRLWQFLDSSFPTGGFAHSLGLEAAHQMGLVWDTVSLRAFVLSALDQAAHLSLPFVSAVHARPTNFVECDRLMHATLTNHIANEASRTQGLALLSSAEACFGAPIGADNDIGALKGEIRASQRLQRLGSSAPHMRLYGHHAPVFGFVCRRIGIDRRTTQRAFMFQALRTLAGAAVRLGLIGPTEAQRLQAECAPSAERLRNECEDTLPEDAWSTAPLADAMQGAQGQLFQRLFSS* # ORIGINAL: g1848.t1 original gene structure, not modified by PASA NODE_3483_length_3365_cov_42.3787 AUGUSTUS gene 1568 2760 . + . ID=g1848;Name=g1848.t1 NODE_3483_length_3365_cov_42.3787 AUGUSTUS mRNA 1568 2760 . + . ID=g1848.t1;Parent=g1848;Name=g1848.t1 NODE_3483_length_3365_cov_42.3787 AUGUSTUS exon 1568 1723 . + . ID=g1848.t1.exon1;Parent=g1848.t1 NODE_3483_length_3365_cov_42.3787 AUGUSTUS CDS 1568 1723 . + 0 ID=cds.g1848.t1;Parent=g1848.t1 NODE_3483_length_3365_cov_42.3787 AUGUSTUS exon 2002 2760 . + . ID=g1848.t1.exon2;Parent=g1848.t1 NODE_3483_length_3365_cov_42.3787 AUGUSTUS CDS 2002 2760 . + 0 ID=cds.g1848.t1;Parent=g1848.t1 #PROT g1848.t1 g1848 MGDKGVCVTAACDTIPTSTSTNRGGRVTCALVDDRNTLTRCFATYPLKLICSKSPVAALLYAVTYGGGILAGDRVELDGSVDEGAALALLTQSSTKIYKPAGGNNSSAVQSIRFAVAPLALLVVLPQPVTCFEGSRYVQRQAFDVAAGGSLVVLDWFTAGRTARGERWAFAEYASRTEIRYGGGLLAVDAVQLRGDAGLRERMGTVGALAVAFVVGPRLLAVCERALRLAACREIDGVNRRPQNSASGETMAVTAVSPIGFGPDSIQGVAIRVAGPSTEAVRHQLRNLIDLTESLGFDPWSSHP* # ORIGINAL: g2262.t1 original gene structure, not modified by PASA NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS gene 1561 9654 . + . ID=g2262;Name=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS mRNA 1561 9654 . + . ID=g2262.t1;Parent=g2262;Name=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 1561 1984 . + . ID=g2262.t1.exon1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 1561 1984 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 2129 2715 . + . ID=g2262.t1.exon2;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 2129 2715 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 3094 3265 . + . ID=g2262.t1.exon3;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 3094 3265 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 3683 3849 . + . ID=g2262.t1.exon4;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 3683 3849 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 4158 4286 . + . ID=g2262.t1.exon5;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 4158 4286 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 4542 4644 . + . ID=g2262.t1.exon6;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 4542 4644 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 4982 5212 . + . ID=g2262.t1.exon7;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 4982 5212 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 5675 5788 . + . ID=g2262.t1.exon8;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 5675 5788 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 5951 6147 . + . ID=g2262.t1.exon9;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 5951 6147 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 6405 6543 . + . ID=g2262.t1.exon10;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 6405 6543 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 6637 6758 . + . ID=g2262.t1.exon11;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 6637 6758 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 6999 7121 . + . ID=g2262.t1.exon12;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 6999 7121 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 7298 7512 . + . ID=g2262.t1.exon13;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 7298 7512 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 7771 7973 . + . ID=g2262.t1.exon14;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 7771 7973 . + 1 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 8276 8481 . + . ID=g2262.t1.exon15;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 8276 8481 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 8858 9023 . + . ID=g2262.t1.exon16;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 8858 9023 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 9347 9525 . + . ID=g2262.t1.exon17;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 9347 9525 . + 2 ID=cds.g2262.t1;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS exon 9625 9654 . + . ID=g2262.t1.exon18;Parent=g2262.t1 NODE_1687_length_9728_cov_38.1595_potentialcontaminant AUGUSTUS CDS 9625 9654 . + 0 ID=cds.g2262.t1;Parent=g2262.t1 #PROT g2262.t1 g2262 MSYASNANAHPPRIPRPKVPSTANLNPTEVGSVGVSAAASLTGEEPSRTADQSDAGVASSRATDTGRTLKAAEIEIPQQLSPLTLGGLSKEEHPYQIPTRTPLDPAPLPIVGIPHGQDATGLGSSMFRTLKDDIGAASLVFAPNKAEFRPSATAAVVTLTESAEFASSPPVPISDIAQGVLQHAHDTAMAVPGDDGLRSIENMAGAGVQTRVRTLTHMLLPITDAQPAFNAESIPNPIQPREDADETASGPMMRRVAALPRSDSGDDGRARSADPSSAVIGGVMEVRTMPTTTAALFSKPGESFRPVCVGKIQFRSTGRTCDVMIVNPQSDECVMEEVYDFLLSKVFGVQKPGFLVSLLCGHGPAIDSMLSEHKRSQLQQLFSRAVVKTAIDTGAIITTNATQNIATELVGRSLGHQTALIDVVGICALYRLYGRDSFELMKERPNEVRTMLYDDCVSAQDIPMGVDSDLLDCNNSKFIIIDTFSPVDEMNFRLHFEQHLVKRIPAVAVLINGDPTILPAVVALARSNVPIIAVKSTGGAADIISEFHEIAAKKAAKKAAAAMACAPTTTVPLSPQKSEEGAAGDVATAAAEKVLSMADGLAATGDRAAAFGFSPEAVAPEGRDSQSALLSPPSLPAPTSTLVPTKATMGRSVVQGIGDGLRKLKLLGTGPAVGDTQSTHAAESTMASVVPALACEPLPVIMRAYEETIDGQRCLSIDTATPFGALGKPSFGTRHPSNCQSLELSFSYLPLESAATGSRPSWVPRSATCSSPLDSAGIARFVLWSCDECGAWSPLPFGVETHICRACSGQHDEFRYMRLSRYPPALVLVTCDAFARFVCDQFFSTDAAKVSHLMRSSGAPAKASQAMKLMLNAVTASAVNEIVLEGTVGVVDIANTIALHELQTFIIGAIQITDRRMGRLDATGWMWMERNQLRLAWERFALYDHQSRRLRSFHRRISVLSLFFAMATTFLSIVNAYVRNDRSVTAAEWVKQTLYVALLVVSLVSAACTAAMHRFNFGSKWLLVRSSCEQVLKEIYMYRTNQLKSTSTHRQGGQTLALSRQLALIANQLKDSDVTEIDVYNLQSGWLGLRQLLRCCFRTETPLDQLAVETGTSDHAHDTADPELRAWILAQLKERLSPEEFAARYDRLVPDNYVKNRLQLIGTLWLGS* # ORIGINAL: g13545.t1 original gene structure, not modified by PASA NODE_2995_length_4577_cov_19.1306 AUGUSTUS gene 2068 3923 . + . ID=g13545;Name=g13545.t1 NODE_2995_length_4577_cov_19.1306 AUGUSTUS mRNA 2068 3923 . + . ID=g13545.t1;Parent=g13545;Name=g13545.t1 NODE_2995_length_4577_cov_19.1306 AUGUSTUS exon 2068 3602 . + . ID=g13545.t1.exon1;Parent=g13545.t1 NODE_2995_length_4577_cov_19.1306 AUGUSTUS CDS 2068 3602 . + 0 ID=cds.g13545.t1;Parent=g13545.t1 NODE_2995_length_4577_cov_19.1306 AUGUSTUS exon 3815 3923 . + . ID=g13545.t1.exon2;Parent=g13545.t1 NODE_2995_length_4577_cov_19.1306 AUGUSTUS CDS 3815 3923 . + 1 ID=cds.g13545.t1;Parent=g13545.t1 #PROT g13545.t1 g13545 MTVPQPGGRTIHITGRQSIRNICKLRTQNGIDLLRRDRHLVGLSKDFLQKGSRYSGGYAAHGSAQPGGGGGYSYSRSSHNNFDDRGRDWRSRQRPSPPTVDERLDVLEQRISEHITSMTDFRTDINKMVCDMFRMQSELTARSVAHPGTTTANTPGVCQAFPPTQQRPYDEFTSTLSPQFSSQQQMHAGAHDFPPTQQRPYDQFTSTLSPQFSSQQQMHAGAHDFPPTQQRPYDQFTSTLAPQFSLQQQMYAGAHDFPPIQQRPYDQLTSTMAQQLLPQMPDRGARQDPSPIQQRPYDRLTSTIAPQPPPQPPKQQQVYTNARHEFSPIQQHPHYQRTQEAHMQRTHSMSEAPFAHQTVKVAPAKKRVKVRKVSAVKGTAFKNAKNTPVDGNVGVVLASLLAVRVSNNHDDITENSRVDTDTRKESVCPMFPSTDNAATVSFRTGHVRAVTPNEEEMVETANPAQSQQLKKLAKVQNSPSAASDAADARNSQRDVNKDARNDNVLTEPTGLGVNNLRMKRRKQQPNLDIICSKEVMNFDNTMPLSRM* # PASA_UPDATE: g13544.t1, single gene model update, valid-1, status:[pasa:asmbl_5358,status:12], valid-1 NODE_2995_length_4577_cov_19.1306 . gene 29 922 . + . ID=g13544;Name=g13544.t1 NODE_2995_length_4577_cov_19.1306 . mRNA 29 922 . + . ID=g13544.t1;Parent=g13544;Name=g13544.t1 NODE_2995_length_4577_cov_19.1306 . exon 29 622 . + . ID=g13544.t1.exon1;Parent=g13544.t1 NODE_2995_length_4577_cov_19.1306 . CDS 29 514 . + 0 ID=cds.g13544.t1;Parent=g13544.t1 NODE_2995_length_4577_cov_19.1306 . exon 782 922 . + . ID=g13544.t1.exon2;Parent=g13544.t1 NODE_2995_length_4577_cov_19.1306 . three_prime_UTR 515 622 . + . ID=g13544.t1.utr3p1;Parent=g13544.t1 NODE_2995_length_4577_cov_19.1306 . three_prime_UTR 782 922 . + . ID=g13544.t1.utr3p2;Parent=g13544.t1 #PROT g13544.t1 g13544 MSLRQHWISHLQDRDVYVCEFCDLRFHHHLTRLRHKYEMHTHRVWRRFVPELLDMPQEWVPKEVADQMDIAEANGDISNGDISDDSDDSDERDSGKINLGGDSDERDPGERDSGEINLGGDSGGDSGGDSGGDSGGDSGGDSGYSGESYPDSQLPASADSA* # PASA_UPDATE: g8988.t1, single gene model update, valid-1, status:[pasa:asmbl_8345,status:3], valid-1 NODE_58_length_47887_cov_42.6622 . gene 10827 12452 . - . ID=g8988;Name=g8988.t1 NODE_58_length_47887_cov_42.6622 . mRNA 10827 12452 . - . ID=g8988.t1;Parent=g8988;Name=g8988.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 12341 12452 . - . ID=g8988.t1.utr5p1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 12204 12452 . - . ID=g8988.t1.exon1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 12204 12340 . - 0 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 12028 12104 . - . ID=g8988.t1.exon2;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 12028 12104 . - 1 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 11787 11916 . - . ID=g8988.t1.exon3;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 11787 11916 . - 2 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 11495 11641 . - . ID=g8988.t1.exon4;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 11495 11641 . - 1 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 11195 11393 . - . ID=g8988.t1.exon5;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 11195 11393 . - 1 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . exon 10827 11017 . - . ID=g8988.t1.exon6;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . CDS 10916 11017 . - 0 ID=cds.g8988.t1;Parent=g8988.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 10827 10915 . - . ID=g8988.t1.utr3p1;Parent=g8988.t1 #PROT g8988.t1 g8988 MFPASSGLRLAWDVNTYMPAAEYNSAKSDMYARHHAQSMGPITRTTQPSVTGTSVLGVKFDGGVVLAADTLASYGSMARFMDVPRLTKINDTTLLGMSGDYADFQSVQTTLESLIIEDESVDDGHRLSPVAIHSYLTRVMYNRRSKFNPLWNEFLVAGFKEGRSFLGFVDKLGVAYEDACIATGYGAYIAVPLLRAALEKKPTMTEAEARKLLTDSLRVLFYRDARSLNRYQIAVVSAAGVKIDEPKMLDTNWDIGHMVSGFE* # ORIGINAL: g8992.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 18089 19367 . - . ID=g8992;Name=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 18089 19367 . - . ID=g8992.t1;Parent=g8992;Name=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 19311 19367 . - . ID=g8992.t1.exon1;Parent=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 19311 19367 . - 0 ID=cds.g8992.t1;Parent=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 19093 19171 . - . ID=g8992.t1.exon2;Parent=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 19093 19171 . - 0 ID=cds.g8992.t1;Parent=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 18089 18939 . - . ID=g8992.t1.exon3;Parent=g8992.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 18089 18939 . - 2 ID=cds.g8992.t1;Parent=g8992.t1 #PROT g8992.t1 g8992 MVLPQNTRASIRYHVAASLVKLFIVAYVMIGLPASVVIEFGIAALGIFVTYYLWQLPGSVEPTASAVEGPVGKTHTENKRAAKAVEHPEGLLALIENTRSTRGSSIDLTSFALTTLPMELATLDNVTSLSFEMPVASGSFSGAALSKMSSLTEVVITGAPLTAEVLSSLKQVASLRHLRVSKCRCVVQEGSAASDTLFVTASDVFAFQSLATHLQTIEIPETCVVEIGVVDRVFTERKVIVLSLARRLAVGDVIAFSRTNHKNFDAGHVVRTASTVVDEIRTDDHRLLLQAGHEGCAEDESLVAVRVEELGKKKDKVVWLGRKRAHTD* # PASA_UPDATE: g8989.t1, single gene model update, valid-1, status:[pasa:asmbl_8342,status:12], valid-1 NODE_58_length_47887_cov_42.6622 . gene 12852 14236 . + . ID=g8989;Name=g8989.t1 NODE_58_length_47887_cov_42.6622 . mRNA 12852 14236 . + . ID=g8989.t1;Parent=g8989;Name=g8989.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 12852 12940 . + . ID=g8989.t1.utr5p1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . exon 12852 12943 . + . ID=g8989.t1.exon1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . CDS 12941 12943 . + 0 ID=cds.g8989.t1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . exon 13045 13120 . + . ID=g8989.t1.exon2;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . CDS 13045 13120 . + 0 ID=cds.g8989.t1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . exon 13227 13336 . + . ID=g8989.t1.exon3;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . CDS 13227 13336 . + 2 ID=cds.g8989.t1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . exon 13857 13914 . + . ID=g8989.t1.exon4;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . CDS 13857 13914 . + 0 ID=cds.g8989.t1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . exon 14058 14236 . + . ID=g8989.t1.exon5;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . CDS 14058 14104 . + 2 ID=cds.g8989.t1;Parent=g8989.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 14105 14236 . + . ID=g8989.t1.utr3p1;Parent=g8989.t1 #PROT g8989.t1 g8989 MSEVEETLKRIQNHKGVIGIVIINNDGIPIRTTLDNSQTVQYAALITQLAAKARSSVRDLDPQNDLTFLRIRSKKHEIMVAPDKEYILIVVQNPTDS* # PASA_UPDATE: g8990.t1, single gene model update, valid-1, status:[pasa:asmbl_8346,status:12], valid-1 NODE_58_length_47887_cov_42.6622 . gene 14510 16163 . - . ID=g8990;Name=g8990.t1 NODE_58_length_47887_cov_42.6622 . mRNA 14510 16163 . - . ID=g8990.t1;Parent=g8990;Name=g8990.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 16119 16163 . - . ID=g8990.t1.utr5p1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . exon 16057 16163 . - . ID=g8990.t1.exon1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . CDS 16057 16118 . - 0 ID=cds.g8990.t1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . exon 15837 15960 . - . ID=g8990.t1.exon2;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . CDS 15837 15960 . - 1 ID=cds.g8990.t1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . exon 15662 15742 . - . ID=g8990.t1.exon3;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . CDS 15662 15742 . - 0 ID=cds.g8990.t1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . exon 15303 15557 . - . ID=g8990.t1.exon4;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . CDS 15303 15557 . - 0 ID=cds.g8990.t1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . exon 14510 15184 . - . ID=g8990.t1.exon5;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . CDS 14546 15184 . - 0 ID=cds.g8990.t1;Parent=g8990.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 14510 14545 . - . ID=g8990.t1.utr3p1;Parent=g8990.t1 #PROT g8990.t1 g8990 MMLKTIVFAALIAYAAAAITTVKLNKVDSGRRSLAHVGTYLNARYGYGALANPEEPLSNYQDAQYYGEISIGTPAQTFKVVFDTGSSNLWVPSSTCGILDIACQTHNKYHADKSSTYVKNGTAFSIQYGSGSMKGFLSQDVVTVSGITVKNQVFAEATSEPGLAFVAAKFDGLLGLGYNTISVDAVTPFWYNAVAQGLVSQPVFAFWLNRNQADSNGGELVLGGLDTAHYTGDITYVPVTRKGYWQFLVDGVKIGGTTSTDACKGGCQAIADTGTSLLAGPTAEIAKIQALIGATAIIGGEYSIDCNKLAGLPNIAFTIAGKDFSLTPDQYVLKVSAGGQTQCISGFLGIDVPSVPGLWILGDVFIGPYYTVFDLGNDRVGFATAK* # ORIGINAL: g8994.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 24101 25808 . - . ID=g8994;Name=g8994.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 24101 25808 . - . ID=g8994.t1;Parent=g8994;Name=g8994.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 24480 25808 . - . ID=g8994.t1.exon1;Parent=g8994.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 24480 25808 . - 0 ID=cds.g8994.t1;Parent=g8994.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 24101 24220 . - . ID=g8994.t1.exon2;Parent=g8994.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 24101 24220 . - 0 ID=cds.g8994.t1;Parent=g8994.t1 #PROT g8994.t1 g8994 MSEERVLLMPADGDSELMPKRPGRFLNLCQFKLSWRSLGHVAFTSAAILFAALFFLSTREPMTAAFREIDVLPHGPYPTGSLSPSIPPIPRTYLNTVIPLTTSAAASCLPSASQNADSTSTLWVLCEATQSCAIEPLFPNEPCGASLVPTAHTSGDGFTESVESYQQRTFAGLPQCSKGWERGRWLLRCPLHLPGATVATGGVLTGDLSRACPANISECEWTTARWQPLECSIPNLSIAEARECLDSVVLLAEGDSTLRGIINATLDIADLIGIDKAHSHRFWDATDQGYHVYYDYFPRLREDIPGVYRQSNTTLTQTFSEFVPRVVQIGRNATGKTIAAVRSRPRKLVIAHGYLYASLATMNVMRDFARSAQFLSPFQEFLQSSDSRAGSVVDAAPIKPLLVSKSRSLYANFKFINESITPINEQLRHMAIENGEIFLDTMQFDVLNSWVRPATDRETGGFRHGADRHPYAERCVRFLLNA* # PASA_UPDATE: g8993.t1, single gene model update, valid-1, status:[pasa:asmbl_8347,status:12], valid-1 NODE_58_length_47887_cov_42.6622 . gene 19655 23873 . - . ID=g8993;Name=g8993.t1 NODE_58_length_47887_cov_42.6622 . mRNA 19655 23873 . - . ID=g8993.t1;Parent=g8993;Name=g8993.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 23768 23873 . - . ID=g8993.t1.utr5p1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 23671 23873 . - . ID=g8993.t1.exon1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 23671 23767 . - 0 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 22784 23582 . - . ID=g8993.t1.exon2;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 22784 23582 . - 2 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 22504 22604 . - . ID=g8993.t1.exon3;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 22504 22604 . - 1 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 22026 22349 . - . ID=g8993.t1.exon4;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 22026 22349 . - 2 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 21726 21850 . - . ID=g8993.t1.exon5;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 21726 21850 . - 2 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 21525 21585 . - . ID=g8993.t1.exon6;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 21525 21585 . - 0 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 21305 21420 . - . ID=g8993.t1.exon7;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 21305 21420 . - 2 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 20973 21052 . - . ID=g8993.t1.exon8;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 20973 21052 . - 0 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 20689 20826 . - . ID=g8993.t1.exon9;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 20689 20826 . - 1 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 20423 20582 . - . ID=g8993.t1.exon10;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 20423 20582 . - 1 ID=cds.g8993.t1;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . exon 19655 20221 . - . ID=g8993.t1.exon11;Parent=g8993.t1 NODE_58_length_47887_cov_42.6622 . CDS 19655 20221 . - 0 ID=cds.g8993.t1;Parent=g8993.t1 #PROT g8993.t1 g8993 MRNAVALFSTSMRRHRFRLLKMWHAASARRRNVAVFVATVLFAVVFICTLLALGVRIPLLGIDDGSIFGVAIFTSHRHDNSAKVTPRSPQVNGMAANAQRGAVGKAVVVDEFDADGDPVAAVGRLVQQVNALRRAGEDAPFHMSAENLAALGQLQREIGRMRVAWAPADIIPEIAREEIEGDMADAEAAVRANKRLEEEEEDRVERSARDSKESGKKGMISVDDVNAGADQNWGASVKRVRIQHAQFIPDRVLGRDSRYLPKVEVVVGVTSARGHFDERQALRETWVGHIKGSPGLKSRVVVKFLVGDKGCTIDAKDRADKYGCEFSVVGKPVVDKEVVAYRVPSDTVGAHRFYGPLGMDFETHHPIIITKLGAFDSGSDGIKRNITVRLYSTDTKQLAATMVFTPRDQGVLVGGTRFKPLRPQIALPKGFRGSIVAEGYGRDEPANNVATEHGDTNDGGGLISFKPVSRFGVQRGKFPDSEERHKHESNQYAAGNFAYKLNPEGKAGVEESIRDSSGRDRRSDIQRKRVQEENQLLREEQNIHNDLLMLDHVDTYRTIPSKMILFHKWIAENFQTEFVLKIDDDCFLDIDGVLRGIDAHGLRGRPRVWWSRFRNDWLVERWGKWREPDYAAPVYPSFACGGGNLMSYDLSAWVARNADSLKTYQGEDTSMGIWLAALSPTLIRDYAWHVLEHCSPGLYSMPELSGDKIISMWKNLTSCGNACNCERALAPPNPVRVAEVVSNGEVVARNDGADVPPGEVVPARDRDVNDDGAGVDDDRNERKQDGKSEENLQEVLREQQPPPPPPQQQQQQQQQQGQQEQQQQGQQEQQQQGQQEQKPEQQQRQARDAEENIDG* # ORIGINAL: g8997.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 31198 38164 . - . ID=g8997;Name=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 31198 38164 . - . ID=g8997.t1;Parent=g8997;Name=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 37196 38164 . - . ID=g8997.t1.exon1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 37196 38164 . - 0 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 34596 37024 . - . ID=g8997.t1.exon2;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 34596 37024 . - 0 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 34141 34287 . - . ID=g8997.t1.exon3;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 34141 34287 . - 1 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 33746 33950 . - . ID=g8997.t1.exon4;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 33746 33950 . - 1 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 33389 33542 . - . ID=g8997.t1.exon5;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 33389 33542 . - 0 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 33000 33132 . - . ID=g8997.t1.exon6;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 33000 33132 . - 2 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 32665 32789 . - . ID=g8997.t1.exon7;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 32665 32789 . - 1 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 32391 32457 . - . ID=g8997.t1.exon8;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 32391 32457 . - 2 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 32012 32144 . - . ID=g8997.t1.exon9;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 32012 32144 . - 1 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 31662 31868 . - . ID=g8997.t1.exon10;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 31662 31868 . - 0 ID=cds.g8997.t1;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 31198 31335 . - . ID=g8997.t1.exon11;Parent=g8997.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 31198 31335 . - 0 ID=cds.g8997.t1;Parent=g8997.t1 #PROT g8997.t1 g8997 MQPAHAGLPAVVALSGPARCAHGRLFKRVRLKKVSAHLESPSVREDVGTATAAALGHVIAVGTSRGSILLFDFNQALRGTLGNAAFGVENGAVTAIALLATTGEFLAAGYETGAVALWDLSSGRLAKVVRDAHENAGPITAVEFGDLHGQVIVASDARGSVFIHTFRKLVGVAMCDSRLLLNGHKAPVVAMSALVPRLPSLSTQGGPPAHHSPAPVPSAMFSACMFAFAMADKILIVRMQPKIEIVHTIARIAGDVFDASPPSTGGHVTAVVPCVSWGVAMNTDATSLASVPSPHKSDGSDDRTTLGRVLLAYSWSAKLRLLQVSCDVGSDAESASRFEFAHRASFDCTSGSIMAAEWLGPYAVALLDQFESIVLVDPHSAEQLDRSDVADIGLAYRPVHIGGARGKIERIYRSAVSSFKGRVMLLGISSCHVATVASWQERISSLVSEGLFLEALSLALAMYDGRARAVIGLPSDAGARRRIVGRQITDLLVAYVDISIAAHTAVAEAAPKRDDRGGAHGNTTFYASLAAVCLDYCLVLDMMEVLFGDIYERFGAEPVAMGAFLETLEPHILADRVQRLTPVIMKDLVAYYSSRGWLSRVEQCILHLDPAGLDLHDAVTLSIRHNLHSAFIYVHNRAMRDYVTPLGHLLGMVVAQVSRRAVDGAVVNSNIQTVVSNDQTPRQIDLESSGGDRRMSRDDASDASVGYKLLLYISLCLTGRAYPGGAIPPESAESVKADVYGFLLARYDTALGYTAKIKTKAGESGIRGGSREKGPSYPHLRILLEFDAREFLNVLSLAFEDPLLDYPMKRTRSLGRLIEPASPAESSPPRGGSRSKASEASPRTERVRQPGRMAVSASALPDVPPDNDATVVVSALPDRQLIVDILLDVVRSDYGHASAGELSSRLGSAAPGSVKARSLDIESAFFVFLARHLSRHSEHVRVGRDVFESMLEVLMLPNDRRFTAKRDNLPNSAASAVGLPSEPLNSGTPSAHPVGVTHSERQEAVLELYHAGALRHMDEERLLLTAEAAGFFQVVELVYARRGQHARILSCYIRDSARCSRSFAYAHRVATDMNAYSDRDRADIREIVRASVRDLAAIDARAAARLFVVDFADDIPAAINEGLAGAGESARLRFEFLRGIFEPRQLSRGPRQLVPPSAESFHEEYIALMCALAPHQVYVYLRDHEGYRLEACLDTCKAHSVTDAQAWILERMGDIASAFALMLDALTAVLREYVFHARDQDGEDETGMSKVSKRPFVVLDAAIGLCKRNSPHMDEIERDDMWFSLLGAVVEILREARMGTGVLGDLSAMTRTILNGMTGHVSLKTILQRVLADETGYGMHTLGDVRDIVAGMLDTIRYEETLLSTTNRIVTHDRFAAVVNLRASKAKGVSPEHPACEHCTASGISRIKDRNGPLAIFVCGHAFHTSCLGAQKKHCPICHARARTLNIMNREPSKSAKGKERATVQDDDLASAMEGGPSSLRAKIAADSAAAAISSATSSATAIEKQRIDALDRYMRALSAQPRVSLELPVSSDSGWSARSRRDISELSDRRFRSKPRSAAIAMRLGAD* # ORIGINAL: g8998.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 38716 42339 . + . ID=g8998;Name=g8998.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 38716 42339 . + . ID=g8998.t1;Parent=g8998;Name=g8998.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 38716 42339 . + . ID=g8998.t1.exon1;Parent=g8998.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 38716 42339 . + 0 ID=cds.g8998.t1;Parent=g8998.t1 #PROT g8998.t1 g8998 MSKSSTVLSLLRSFVGENALARATSPADQNKSTIQDVLGAGLSRLASACDSLEPAVESIPTNNSISLHARLSFLYDASGDASSPLDVRWRYTLSCVALIEMLVASFSRESDGDVDEDVLYAAVGLEDVRLCRFAVEMIVCLGVHPCLSAGVGVPVEQRASRAASLVLRSLASAPEDKNCAASPTDRYSRLSKCMNALVPLATSTSLRKYVLAGSTSDVVAGLLQLVHEPLESYLEQEETRRQTEHPLNQQQALSESNLSDLPAGVTAASPADLRQQRPTSVIETRTPSTRRSLSVHAETQLDAVLASLSPSESLAILAPLGGTATRKAPEWIRRVSGALSSRTLMRNGGVAALASIMLSTSTCSPPGATNRTQDASPGNTRERSSSSGGGDAEDDMDGSVDDEDDRVDWKAFEGLARVVAAIPRQVASVEEYYAAVSVQVVDIFRASSRVPRSSNAYSHSQSLSRAMLCVLSRMMARNPALGRRLLLGPIVQPLGTVSLLLGLSAGIPHAPNNLAESRKTDEVAVDANTLSDIMRACGGVDDSDDIVIAESVLGECVGDLHRIVAMSDPSAALVDGCLQCVPPLFRLYAHCRRAPTSLRAPVHEILVALLRVADVPASVSALHSALFCAPTEGQGFGYQGDDLRYEFAGGPSGGVVLRRKKTGDTLEDGGSESDAEGSAVELEWLSACFIELLGSVAKEELSCEMFVRLLSDYTSAFNGTKDTETGHNLEVLPSREIVLRLVLMLAETLGPSLLKNATHTISFANAMLASALASTRRAEESDSEYNSGGISGLLRREMMAGDSGDSKHGTQTHPFDDDQMETVSVSLALLSALIDDETRLNDAQSAQLLAMLPTLDAIAHNAQSGGAGHGAGSNSNSNNNGSRSATKLGGLAGDIAKEGATADSIDAEEGRSTLSTDIASLARDVRDRIAIHKAVAARKRAQSQMKASSEGQDDARLQPPESFTQVLSMLQDPLLPVRAHALMNLRKLLLRGDKEATANASTALVLFENALEDPDSYMYLTAINGLAAMADVMPRRTIPHLVREYADAKRPADTRLRIGEALLMAAERLGDVLPRHAGELLGAFFVGARDSDALVRASSLSNIGTAAGMLQHAIHPYVVEVLSCAGAVARHDRDAVVRRAAVHVILLMVRGMGSNIVHIVPDGIKEMYRLLKELAFRDQDEIVRSHANAALADLDEVFRSFCFPSQQ* # ORIGINAL: g8986.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 158 4343 . - . ID=g8986;Name=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 158 4343 . - . ID=g8986.t1;Parent=g8986;Name=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 4253 4343 . - . ID=g8986.t1.exon1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 4253 4343 . - 0 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 3710 3995 . - . ID=g8986.t1.exon2;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 3710 3995 . - 2 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 3502 3615 . - . ID=g8986.t1.exon3;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 3502 3615 . - 1 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 3260 3377 . - . ID=g8986.t1.exon4;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 3260 3377 . - 1 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 2964 3039 . - . ID=g8986.t1.exon5;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 2964 3039 . - 0 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 2553 2712 . - . ID=g8986.t1.exon6;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 2553 2712 . - 2 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 2369 2394 . - . ID=g8986.t1.exon7;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 2369 2394 . - 1 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 1738 2205 . - . ID=g8986.t1.exon8;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 1738 2205 . - 2 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 1488 1569 . - . ID=g8986.t1.exon9;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 1488 1569 . - 2 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 1224 1364 . - . ID=g8986.t1.exon10;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 1224 1364 . - 1 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 835 970 . - . ID=g8986.t1.exon11;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 835 970 . - 1 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 538 705 . - . ID=g8986.t1.exon12;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 538 705 . - 0 ID=cds.g8986.t1;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 158 311 . - . ID=g8986.t1.exon13;Parent=g8986.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 158 311 . - 0 ID=cds.g8986.t1;Parent=g8986.t1 #PROT g8986.t1 g8986 MARRRGFDGLEDGLEGLDDSTADLSAALISGTIEMSSAFDQSSINAVEPEVKPLAEIQLNPEFLTKESENSPKMFLHLCDQVANRMTQLDTIIRELFEWKDKLLGYNLPPNVLVHLTLICSKMFRSDAELHEPLLELVRLVRLYSLPWDKQTAMFQQAQEEIEIRDRKLDIALRKLEQANSEVERYRQSRRVLNWERLVSKLLMNAKMEEYYQLFDNGSTEDIYEKSIAAKQRERAAERAAETDPDTDDDMSHALGAKIKKKSKGKGKAPRRQALKSKSKERASIGGDRDGANDDSAPRAPSRGPPTPAPVDQNKQPTNASTVNLAAQQLTEDAAVPSAEQQTSSGDAPPIPPPTDVYANSGTAPSPTAPDAQGQAVAGGSPANQTPAQGTPTATRPPSALPGTGADAHGSLAQSPVPLEDPAGAVVAAALGSMYQDARMGLGTRKDLRDDDQISVVSDVPSDHSMNVTFADENLFGMQQNVAAQTFDMFDVEQEKFSIQDVMEMALVHARQMTLLQETYEKRLNELRENLRAASAQAAESMRLRQAAMRRLGPNRLVTRKGGPVGHLDEPNRVFARDAAMLGRPRGRPTKLTALATEDFFKNGIFKAKIPSEYTDIKFTMSFMDRLEYFAQEGLKKHRELADKIRNEVQQAYEQSLQTLHRLARENQEELGE # PASA_UPDATE: g8996.t1, single gene model update, valid-1, status:[pasa:asmbl_8344,status:12], valid-1 NODE_58_length_47887_cov_42.6622 . gene 29243 31120 . + . ID=g8996;Name=g8996.t1 NODE_58_length_47887_cov_42.6622 . mRNA 29243 31120 . + . ID=g8996.t1;Parent=g8996;Name=g8996.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 29243 29269 . + . ID=g8996.t1.utr5p1;Parent=g8996.t1 NODE_58_length_47887_cov_42.6622 . exon 29243 31120 . + . ID=g8996.t1.exon1;Parent=g8996.t1 NODE_58_length_47887_cov_42.6622 . CDS 29270 30745 . + 0 ID=cds.g8996.t1;Parent=g8996.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 30746 31120 . + . ID=g8996.t1.utr3p1;Parent=g8996.t1 #PROT g8996.t1 g8996 MHTADRAARLHRRLLGQAVAAARQTCSSASQCTCNCRQCFKRPAYIGDPSKSPRPSHLSLCEYAGVEQLRRSSLAPPMRRSSYNRTSVALLFLLVVSAVTHVVLYSIWISADGACDTASPRDGLSPFSRFRRMRDRNDVRLHGNGSAVVVGHFIESTPVVAPVEVGPPPCLARIAKEGFDVDEEAKLLRRRNSAANCSWMGPDHVFYYPPAREDNPQTRLCMCLFSLVHEFFWIEMGVAYHIRGGTLLGAFRNGGLIFGDTDLDADFYLPPDPDSACGIRRWEAQMYITFMMMHAHTVFKSRICPDVDLRWIFKGPSWMKMSATQPGRGMYCGADIHAFAFRSQAEFEQKSRDICSCKIGSKMGRCPDGDKPEKLFAVHYGPTWWLQILPFKGFVNASDPSKGIRLDTPATRMGTLQVLSGYDLDGNGKISMTETRKLFEQNGMHPDEVAALSNAMVSKRSKEVNFLYQYFQNIVALKDTPAHGTEVEIRP* # ORIGINAL: g8995.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 26292 27803 . + . ID=g8995;Name=g8995.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 26292 27803 . + . ID=g8995.t1;Parent=g8995;Name=g8995.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 26292 27803 . + . ID=g8995.t1.exon1;Parent=g8995.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 26292 27803 . + 0 ID=cds.g8995.t1;Parent=g8995.t1 #PROT g8995.t1 g8995 MVALASRSQSTGFESTGANAKLTVGVGDAVSDIPRRDGLIFKVMRHVMQIFGGHQSPHKSGVETAGFKYVCANCINGAIDKRSASAATPDGDKLAASALAMHHKAFTPGRLSALQSNWILIPTVDYNRTCRSSHVVHHWKLQTPLLTRRRNHDCSVIGDALVLLVGRFAPNIEIVNLTTGQQEHATGSAQESLLDLSHTVNVRFDARQEIWLPCGFLSSSVNKEISADAVTIINTATTPWVIRRGPSLNLPRGGCGALPLHVSSKHGDPDVCLFGGSIGSHNKGKFLADVACYNLASDRWHKPFPDMPVVADHVNVVHTPAIECPDSQGGAPARVVVLNFRQSPYGIRSPAMYAVDLYETHGGRIEAASEGWYVLANDTATQPRDAAGVVLSPSGRFIIMFGGVHAYHAPDERLRFNSSDEVRAFDMCRRAWIPNLSRMTQRRFAIEACKGGDYAFVCAGTSPDRSQQDVHENLGDCEAFSVSDLEFVATNIADDCTDWKAAG* # PASA_UPDATE: g9000.t1, single gene model update, valid-1, status:[pasa:asmbl_8348,status:3], valid-1 NODE_58_length_47887_cov_42.6622 . gene 45981 47734 . - . ID=g9000;Name=g9000.t1 NODE_58_length_47887_cov_42.6622 . mRNA 45981 47734 . - . ID=g9000.t1;Parent=g9000;Name=g9000.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 47659 47734 . - . ID=g9000.t1.utr5p1;Parent=g9000.t1 NODE_58_length_47887_cov_42.6622 . exon 47640 47734 . - . ID=g9000.t1.exon1;Parent=g9000.t1 NODE_58_length_47887_cov_42.6622 . CDS 47640 47658 . - 0 ID=cds.g9000.t1;Parent=g9000.t1 NODE_58_length_47887_cov_42.6622 . exon 45981 47453 . - . ID=g9000.t1.exon2;Parent=g9000.t1 NODE_58_length_47887_cov_42.6622 . CDS 46339 47453 . - 2 ID=cds.g9000.t1;Parent=g9000.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 45981 46338 . - . ID=g9000.t1.utr3p1;Parent=g9000.t1 #PROT g9000.t1 g9000 MFATTIDSDAPPEELIVVLQERQEQEIADAKAAEDDLADLESMLKKPKKDAAATSKPPASSAAETQRPAPADDASKERNEAALREQKEKQERDKAAVDAERAERERADKERSDRERAEKERLELERLDRERREKEIVERERIERERSEKADKDNGERDRYLKAKAEIDRLWDDVQAEERAKLPSSKRAPAASSVTPSLLGASASASSLRASIAVPSPSAPTASTPAPAPAPFPAPAQQAASPSPQQPLSPAPSANAAALNEARGLIQDQGQRVTDAISQLMQTVKSGSAASYVEATVAVIKASGELIRLKEGVVPLLPATRATAAASACDALAGSFGPLVASTKSAVADPTTVQAMMRCAFEVLKKTQEFLLAALDD* # PASA_UPDATE: g8987.t1, single gene model update, valid-1, status:[pasa:asmbl_8340,status:3], valid-1 NODE_58_length_47887_cov_42.6622 . gene 7058 10668 . + . ID=g8987;Name=g8987.t1 NODE_58_length_47887_cov_42.6622 . mRNA 7058 10668 . + . ID=g8987.t1;Parent=g8987;Name=g8987.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 7058 7306 . + . ID=g8987.t1.utr5p1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 7058 7395 . + . ID=g8987.t1.exon1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 7307 7395 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 7512 7567 . + . ID=g8987.t1.exon2;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 7512 7567 . + 1 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 7671 7735 . + . ID=g8987.t1.exon3;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 7671 7735 . + 2 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 7854 7886 . + . ID=g8987.t1.exon4;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 7854 7886 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 8013 8079 . + . ID=g8987.t1.exon5;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 8013 8079 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 8232 8373 . + . ID=g8987.t1.exon6;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 8232 8373 . + 2 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 8532 8705 . + . ID=g8987.t1.exon7;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 8532 8705 . + 1 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 8898 8979 . + . ID=g8987.t1.exon8;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 8898 8979 . + 1 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 9173 9250 . + . ID=g8987.t1.exon9;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 9173 9250 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 9397 9499 . + . ID=g8987.t1.exon10;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 9397 9499 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 9796 9839 . + . ID=g8987.t1.exon11;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 9796 9839 . + 2 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 9977 10060 . + . ID=g8987.t1.exon12;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 9977 10060 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . exon 10398 10668 . + . ID=g8987.t1.exon13;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . CDS 10398 10559 . + 0 ID=cds.g8987.t1;Parent=g8987.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 10560 10668 . + . ID=g8987.t1.utr3p1;Parent=g8987.t1 #PROT g8987.t1 g8987 MNDGEIMSLMAGFLNHRGYTDTLAQLRNESGLTLNVVDEKENELIRILGEYRLWKSNLAREAKRVNAADLSEEGDDQYPRKLLHTIDGIHAANILTVRLLPSGLLASGSSDKTVTLTRVVISEDSVEADIQNILAHHTGGVLAVEYNPADANVLLSGGMDGMVSLIDIASGEILQKFRDHAKYVVKVRWADHGNAFATASYDKSVCVYSRESDCAEYCLQKKLDFTTAVEAIAFNKGATELAVSAREDNYLYFVEMTSGSFTRSRVNMNAYGDDWVSFSAMELSYSPNNKYLLVSTDKDRLILFLRETGEQVRNFYGATNDEFGQPRHCWHPSGHYIFSTSQDMCIYIWDVKTEKTVAKLSGHKGVVRDISFVPDLDVLVSCGFDHKILVWK* # PASA_UPDATE: g8999.t1, single gene model update, valid-1, status:[pasa:asmbl_8343,status:3], valid-1 NODE_58_length_47887_cov_42.6622 . gene 42644 45980 . + . ID=g8999;Name=g8999.t1 NODE_58_length_47887_cov_42.6622 . mRNA 42644 45980 . + . ID=g8999.t1;Parent=g8999;Name=g8999.t1 NODE_58_length_47887_cov_42.6622 . five_prime_UTR 42644 42693 . + . ID=g8999.t1.utr5p1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 42644 43126 . + . ID=g8999.t1.exon1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 42694 43126 . + 0 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 43336 43455 . + . ID=g8999.t1.exon2;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 43336 43455 . + 2 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 43611 43783 . + . ID=g8999.t1.exon3;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 43611 43783 . + 2 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 43990 44163 . + . ID=g8999.t1.exon4;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 43990 44163 . + 0 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 44438 44488 . + . ID=g8999.t1.exon5;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 44438 44488 . + 0 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 44801 44873 . + . ID=g8999.t1.exon6;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 44801 44873 . + 0 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 45036 45195 . + . ID=g8999.t1.exon7;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 45036 45195 . + 2 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 45377 45515 . + . ID=g8999.t1.exon8;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 45377 45515 . + 1 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . exon 45758 45980 . + . ID=g8999.t1.exon9;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . CDS 45758 45865 . + 0 ID=cds.g8999.t1;Parent=g8999.t1 NODE_58_length_47887_cov_42.6622 . three_prime_UTR 45866 45980 . + . ID=g8999.t1.utr3p1;Parent=g8999.t1 #PROT g8999.t1 g8999 MSSARNIPAIVTDDGDGAALLPRTARSASRLSRRPSIADRIVAVVSAVDVVDDELPNAADRSFDELRTCLRVGDDGDSISVRNADGYSALGDDVDADDVDVGTGEDATRGLLESDGAGGRRPSVVKSSVADEEGEAEKHGPKDDYVWHFPPRWEEKIAWFDDPIIHACQKLSGNALHVFNIVCLALTAIETGIAVPMVLHIMGLDALAQLATFLMLALCGVSQIPKRFIWRYRPYMVGRARKVRRDLTSSFPSRAVTCGIVYTYGAIAAYNYAHSVSITQLHWEGVLCILGAALLLSFTRVNMGAHYPSDCVIGMFQGTFVCLLGAGLYLAEIDGCHSCLHDDCYGTGESELTWTTLRGLSWPLVVFMSLGGVLLTLLFVAKPIKFWVKCHHAFGMLFPCVMFQAAYLCRPNTKSGVALPPPRSPSWYAYIYAVAAATLTTVIGMRVKGATHRTVLAYIVMFATVLLAVACWRLSM* # ORIGINAL: g8991.t1 original gene structure, not modified by PASA NODE_58_length_47887_cov_42.6622 AUGUSTUS gene 16965 17558 . + . ID=g8991;Name=g8991.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS mRNA 16965 17558 . + . ID=g8991.t1;Parent=g8991;Name=g8991.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS exon 16965 17558 . + . ID=g8991.t1.exon1;Parent=g8991.t1 NODE_58_length_47887_cov_42.6622 AUGUSTUS CDS 16965 17558 . + 0 ID=cds.g8991.t1;Parent=g8991.t1 #PROT g8991.t1 g8991 MAAEGIEHLLFVVGNELQTQRRAFSDRDAASDVGRVPPYDPSSPSASSDFSDMSVPGDGLSAKVKRSSRKGSVDSCSTDGGSVSGRDAVRSKLAHIASEKKRRASIRNGFDELRNEVPTCNACHSKAAILQKAVEHIRQLKQRKDNRSETEEALELKRKLSFAVNFIEALNKQKAALADNIARLEADLARARADQRI* # ORIGINAL: g10187.t1 original gene structure, not modified by PASA NODE_4255_length_1923_cov_34.5333 AUGUSTUS gene 145 1880 . + . ID=g10187;Name=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS mRNA 145 1880 . + . ID=g10187.t1;Parent=g10187;Name=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS exon 145 378 . + . ID=g10187.t1.exon1;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS CDS 145 378 . + 0 ID=cds.g10187.t1;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS exon 631 738 . + . ID=g10187.t1.exon2;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS CDS 631 738 . + 0 ID=cds.g10187.t1;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS exon 1134 1229 . + . ID=g10187.t1.exon3;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS CDS 1134 1229 . + 0 ID=cds.g10187.t1;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS exon 1471 1542 . + . ID=g10187.t1.exon4;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS CDS 1471 1542 . + 0 ID=cds.g10187.t1;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS exon 1728 1880 . + . ID=g10187.t1.exon5;Parent=g10187.t1 NODE_4255_length_1923_cov_34.5333 AUGUSTUS CDS 1728 1880 . + 0 ID=cds.g10187.t1;Parent=g10187.t1 #PROT g10187.t1 g10187 DTLLTRVTPSHCLSCIPMPQMFLKPLRSGDIVEAADVTTLFSNVEKIREFNLELLGQLKNRIAAWSDSQLIADLFTDMATSFKIYTIYCNNYDNALNLVQKHSKAKRAFQAFMDANFANPSCQGLTLPAYMIMPVQRIPRYVLLLKDLAKKTPDTHPDHQNIVNAVGKMEELADFVNSSLREAESQKMFMNLGKQISGLKVRWVYSISSLAFHVVLSFLF* # ORIGINAL: g9488.t1 original gene structure, not modified by PASA NODE_4020_length_2332_cov_34.4094 AUGUSTUS gene 1247 1860 . - . ID=g9488;Name=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS mRNA 1247 1860 . - . ID=g9488.t1;Parent=g9488;Name=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS exon 1743 1860 . - . ID=g9488.t1.exon1;Parent=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS CDS 1743 1860 . - 0 ID=cds.g9488.t1;Parent=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS exon 1462 1568 . - . ID=g9488.t1.exon2;Parent=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS CDS 1462 1568 . - 2 ID=cds.g9488.t1;Parent=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS exon 1247 1276 . - . ID=g9488.t1.exon3;Parent=g9488.t1 NODE_4020_length_2332_cov_34.4094 AUGUSTUS CDS 1247 1276 . - 0 ID=cds.g9488.t1;Parent=g9488.t1 #PROT g9488.t1 g9488 MRSLFSWSVPFASATIVSLLLVITTLLMLIPLRYILFLYGIHKFTVHFRRSADYIDWNELFVFISRLPSDVDLVHRRPPIDKKK* # PASA_UPDATE: g9077.t1, single gene model update, valid-1, status:[pasa:asmbl_7684,status:12], valid-1 NODE_4874_length_1172_cov_33.2552 . gene 217 1123 . + . ID=g9077;Name=g9077.t1 NODE_4874_length_1172_cov_33.2552 . mRNA 217 1123 . + . ID=g9077.t1;Parent=g9077;Name=g9077.t1 NODE_4874_length_1172_cov_33.2552 . exon 217 302 . + . ID=g9077.t1.exon1;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . CDS 217 302 . + 0 ID=cds.g9077.t1;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . exon 460 534 . + . ID=g9077.t1.exon2;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . CDS 460 534 . + 1 ID=cds.g9077.t1;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . exon 643 868 . + . ID=g9077.t1.exon3;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . CDS 643 868 . + 1 ID=cds.g9077.t1;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . exon 1017 1123 . + . ID=g9077.t1.exon4;Parent=g9077.t1 NODE_4874_length_1172_cov_33.2552 . CDS 1017 1123 . + 0 ID=cds.g9077.t1;Parent=g9077.t1;3_prime_partial=true #PROT g9077.t1 g9077 MRDNHHAMVLAQMYDFKPGILYLYEKAKLYMQIVQYYMENNEHYQIIATCKKYGKQDPNLWIQVLSYFAGKPEGCRKEIAEVLSAVTENNLLPPLLVVQILARSKAATLAVARDYIKGRLVEEAALIAEDEKAIDEYRERTRAMREDIHAIKTRCVRVCVRVCV # PASA_UPDATE: g12996.t1, single gene model update, valid-1, status:[pasa:asmbl_9171,status:3], valid-1 NODE_748_length_18180_cov_44.5308 . gene 14975 16013 . - . ID=g12996;Name=g12996.t1 NODE_748_length_18180_cov_44.5308 . mRNA 14975 16013 . - . ID=g12996.t1;Parent=g12996;Name=g12996.t1 NODE_748_length_18180_cov_44.5308 . five_prime_UTR 15953 16013 . - . ID=g12996.t1.utr5p1;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . exon 15867 16013 . - . ID=g12996.t1.exon1;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . CDS 15867 15952 . - 0 ID=cds.g12996.t1;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . exon 15577 15662 . - . ID=g12996.t1.exon2;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . CDS 15577 15662 . - 1 ID=cds.g12996.t1;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . exon 14975 15444 . - . ID=g12996.t1.exon3;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . CDS 15179 15444 . - 2 ID=cds.g12996.t1;Parent=g12996.t1 NODE_748_length_18180_cov_44.5308 . three_prime_UTR 14975 15178 . - . ID=g12996.t1.utr3p1;Parent=g12996.t1 #PROT g12996.t1 g12996 MATKDATVDRESVQSAYDDVRNDNSATSWAVFTYSSTNNISTAATGSDYEELLTYLKDDERVYAFVRIETGDELSKRAKFAFIAWIGDGVNPLRKAKVSTDKAFVKQIVQSFACEILASDKNELKFADVKAKVVKAGGANYGTGR* # ORIGINAL: g12991.t1 original gene structure, not modified by PASA NODE_748_length_18180_cov_44.5308 AUGUSTUS gene 92 2390 . - . ID=g12991;Name=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS mRNA 92 2390 . - . ID=g12991.t1;Parent=g12991;Name=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 2315 2390 . - . ID=g12991.t1.exon1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 2315 2390 . - 0 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 2114 2149 . - . ID=g12991.t1.exon2;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 2114 2149 . - 2 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 1810 1909 . - . ID=g12991.t1.exon3;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 1810 1909 . - 2 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 1600 1686 . - . ID=g12991.t1.exon4;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 1600 1686 . - 1 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 1306 1458 . - . ID=g12991.t1.exon5;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 1306 1458 . - 1 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 764 941 . - . ID=g12991.t1.exon6;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 764 941 . - 1 ID=cds.g12991.t1;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 92 333 . - . ID=g12991.t1.exon7;Parent=g12991.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 92 333 . - 0 ID=cds.g12991.t1;Parent=g12991.t1 #PROT g12991.t1 g12991 MPTVPVSRDLLFEALGQKFTDDEFDELCFEFGIELDEVTSEQKMISKERGQDSAKGAKEEIIYKIEVPANRYDLLCLEGLARALRVFLKKETGPRYSVVEPDAPQRLIVKAETAEVRPFVVAAILRDTHFNENSYESFIELQDKLHQNICRKRTLVAIGTHDLDTIQGPFTYEARTPADISFVPLQKDKEPTPPNDGKAYTAAELMTLFESDAFLKQYLPIIRDRPRYPVIYDATGKVLSLPPIINGDHSKIKLSTKNVFIECTATDLTKAKITLNMMVTMFSQYCAKPF # ORIGINAL: g12993.t1 original gene structure, not modified by PASA NODE_748_length_18180_cov_44.5308 AUGUSTUS gene 7823 10000 . - . ID=g12993;Name=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS mRNA 7823 10000 . - . ID=g12993.t1;Parent=g12993;Name=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 9903 10000 . - . ID=g12993.t1.exon1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 9903 10000 . - 0 ID=cds.g12993.t1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 9617 9731 . - . ID=g12993.t1.exon2;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 9617 9731 . - 1 ID=cds.g12993.t1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 9348 9501 . - . ID=g12993.t1.exon3;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 9348 9501 . - 0 ID=cds.g12993.t1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 8815 9074 . - . ID=g12993.t1.exon4;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 8815 9074 . - 2 ID=cds.g12993.t1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 8365 8565 . - . ID=g12993.t1.exon5;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 8365 8565 . - 0 ID=cds.g12993.t1;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 7823 8185 . - . ID=g12993.t1.exon6;Parent=g12993.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 7823 8185 . - 0 ID=cds.g12993.t1;Parent=g12993.t1 #PROT g12993.t1 g12993 MSATAGRIGDLPAEPNVDGQRFLITGGGGYLGRRLCADLLRRGAACVHLFDVREPASYPASIDKSKIKFFKGDIRKKDNVRDAVRGVDGVFHVASYGMSGREQLQRQLIEDINIAGTQNVLDACREFNVRRLVYTSTTNVIFAGRPIVNGDETLPYTPAEDYVDNYSRTKMIAERTVIAANEKGVLHTCAIRPAGIYGEGEERHLPRIMNYIELGLFGFVYGAPECKVEFVYIENLVWSHVLAMHSLSLPSAPAAGQPYFISDNEPINNFEFFRPLLEGLGYSYPSLRLPFSLVYIVAWVIELIHRIVSPVFNFQPLLTRGEVNKTGVTHYFKPDKGKKELGYEPQVTYAEGMARVVKHFRAEGRTADARKSLLTSPLFLVLVAAIILAFVFVYQR* # ORIGINAL: g12994.t1 original gene structure, not modified by PASA NODE_748_length_18180_cov_44.5308 AUGUSTUS gene 10530 11250 . + . ID=g12994;Name=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS mRNA 10530 11250 . + . ID=g12994.t1;Parent=g12994;Name=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 10530 10640 . + . ID=g12994.t1.exon1;Parent=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 10530 10640 . + 0 ID=cds.g12994.t1;Parent=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 10819 10971 . + . ID=g12994.t1.exon2;Parent=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 10819 10971 . + 0 ID=cds.g12994.t1;Parent=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 11110 11250 . + . ID=g12994.t1.exon3;Parent=g12994.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 11110 11250 . + 0 ID=cds.g12994.t1;Parent=g12994.t1 #PROT g12994.t1 g12994 MLSNFEVLSFIREVKAETGQKPGGNGSQQNLLTITYEVTKHIESTPASVQTVESVGLFLEAFKNTNITRGERLMLLNHRPASTVEVHSMIEECEERMDESAVEKIIEDLQKTLPAVPEDEPEEGDASAQDMQVD* # PASA_UPDATE: g12995.t1, single gene model update, valid-1, status:[pasa:asmbl_9169,status:12],[pasa:asmbl_9170,status:12], valid-1 NODE_748_length_18180_cov_44.5308 . gene 11660 14236 . - . ID=g12995;Name=g12995.t1 NODE_748_length_18180_cov_44.5308 . mRNA 11660 14236 . - . ID=g12995.t1;Parent=g12995;Name=g12995.t1 NODE_748_length_18180_cov_44.5308 . five_prime_UTR 13978 14236 . - . ID=g12995.t1.utr5p1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . exon 13506 14236 . - . ID=g12995.t1.exon1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . CDS 13506 13977 . - 0 ID=cds.g12995.t1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . exon 12705 13412 . - . ID=g12995.t1.exon2;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . CDS 12705 13412 . - 2 ID=cds.g12995.t1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . exon 12212 12536 . - . ID=g12995.t1.exon3;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . CDS 12212 12536 . - 2 ID=cds.g12995.t1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . exon 11660 12063 . - . ID=g12995.t1.exon4;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . CDS 12021 12063 . - 1 ID=cds.g12995.t1;Parent=g12995.t1 NODE_748_length_18180_cov_44.5308 . three_prime_UTR 11660 12020 . - . ID=g12995.t1.utr3p1;Parent=g12995.t1 #PROT g12995.t1 g12995 MAQDDFPSIVSVVVKCAGGSVEDISVECPLTWTVGRLKDRITEAYPGNPPRAGIRLIHAGRLVKDDCPLSDAFRYYEPGVPQILHLVVRDDSDSRPATPSSAASTAPSTPATPRVPPRTPSMQRNVMSTPTPRTPTPATPTPATPAFATPSAPSPVPAYSYYGSPHYGGQWDTATAAHAWQQYWLAASASASAASSHPSSPMAAHVPMAPRLMYVPLSPMSGHGGMGVVAMPAMMAPAFVPPASPVAPSTLASPATPVVAPAAGEGRSADVVNNNNNNNIINNNNINDNPAADANAVRPAVARAVNDDDANDGPIIGAGGLGGGNVANDDWDNQRETPLRLLAKLGVLVFIFSQGASKERVVLLSLTAFCVFVYQIVRVRVVRRQINTPVDARVRPLPHADAANNNVAIDNNNNNNNNNNNNSNNNNNNNNNNNNNDNESHNERVGEDTPADAPAADATTGDAAEAVEGADDTSGVQPPAGGLLHDMEQIILTFFTSLIPNRFENMQALAAGAPN* # ORIGINAL: g12992.t1 original gene structure, not modified by PASA NODE_748_length_18180_cov_44.5308 AUGUSTUS gene 4110 7440 . + . ID=g12992;Name=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS mRNA 4110 7440 . + . ID=g12992.t1;Parent=g12992;Name=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 4110 5546 . + . ID=g12992.t1.exon1;Parent=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 4110 5546 . + 0 ID=cds.g12992.t1;Parent=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 5684 7252 . + . ID=g12992.t1.exon2;Parent=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 5684 7252 . + 0 ID=cds.g12992.t1;Parent=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS exon 7324 7440 . + . ID=g12992.t1.exon3;Parent=g12992.t1 NODE_748_length_18180_cov_44.5308 AUGUSTUS CDS 7324 7440 . + 0 ID=cds.g12992.t1;Parent=g12992.t1 #PROT g12992.t1 g12992 MLYESILSHDDPPHASCEHGADDQWAWRSEDGLKSPLHLKSTRHVGSLPSPSIVKAKHQRKVLCGIAFLVLALVAGLVGHTVAQFAAQRQTDEMRAACKRASSGAVATISMLADTVHWEASTVAGALGWRWRIANVSDLSAALADGMHPPSFAAEPVCSSVVWAPSVDQDDVRDFEERVRGHNGPMFSNYTVGGFADGILLDGAGIAASEPSGYAVSRMHLPILFHHPTGDRGAVDSAPPGIDLRVYFAGTAASSALQRVARGTAEYASAVVTSGTYPNLRGRVWMFLPVKDVTCADESDRRRQSHTVCTSTNRGVVAVEFDIDTAFHSLRRALVFEDNVSVLIVAVEESASRTTTNSEDVPQLSLLYTDSDATTGALLASIGNAQAAARGAVIVTSLPFVGLRLDAAILTEDMLFGSVAVGLEERLLVALVSVVTLCIATLIAVGVAGIERSRLKKKAYQAAPESARREMDINTAMVGYLRHEVKNILNGMTGCLELCESQLVGDPDDSSPRTRFTAHVGDGRGVGAGCNSSTPVDDIQDALRMCGLLRVVVDDILNIYHFEDRALASNSSSFSLRHLEEVLNEAAVLRISSERRSIRMTYSLAACETDSDATIHGRRSVDIDTVSIVADAAHIQQAFCSMMGNAIQHTFDGEVNVSIAVVFENTSSPASSPRQGTLTCTVTDSGSDIPREARPYLFKPFSQLPVGQDGPSGGRGVGLSICAFIAKQLGGSVGCRARGDGSRGCELWVRVPVNVVVAPPNAGDAASDAVPLTQHVTVSSTVPGPHVIPSTGRGGVPVPSIPSSPACSRLGVASIAVAGDRCAPLTPPSPSPTPTADIETPVVRLRPRHLVCDDGAINRTILRRFLERAVDAEVDEACNGAEAVALVIRRGGGQAYDAVWMDVHMPVMDGIEATRRLRMLAQSRNIPIIGVTASMGTLVSLAPHTPSVCPPRDDAADEGADTSLLRTGNHGSGAVYLAGISGEELVDAGMTEVLCKPITQASRADVRKPSSRGEGVQSSGGDPQPLKSPELLSLNCLNWV* # PASA_UPDATE: g10665.t1, single gene model update, valid-1, status:[pasa:asmbl_488,status:12], valid-1 NODE_1128_length_13761_cov_41.5665 . gene 831 2971 . - . ID=g10665;Name=g10665.t1 NODE_1128_length_13761_cov_41.5665 . mRNA 831 2971 . - . ID=g10665.t1;Parent=g10665;Name=g10665.t1 NODE_1128_length_13761_cov_41.5665 . exon 831 2971 . - . ID=g10665.t1.exon1;Parent=g10665.t1 NODE_1128_length_13761_cov_41.5665 . CDS 1601 2971 . - 0 ID=cds.g10665.t1;Parent=g10665.t1 NODE_1128_length_13761_cov_41.5665 . three_prime_UTR 831 1600 . - . ID=g10665.t1.utr3p1;Parent=g10665.t1 #PROT g10665.t1 g10665 MSFMLMHATAVGLRLRGCASSSSRSHCAHFKVPLHARGGCDHVRTACALSSPAQHTLSTVPTVRVRGAHSHSHSHSDAAHSPALSLSTAGLRSGIQRDDAPEPIAASKRQGLQHFKATELYAHAKRVYENSTRVYSSQRKSGVARGMPAKYLDEVRAYYKEHSAVPVVTVQQSQLFTVAEDRRIVEMIKEGKGWTEIGRALGKSSVQILQRFMCSLDPRLRHEPYTAEEDAAIHAHVSAHGEGNWAVLSAKMGRTRNAKALQIRYRHTLRPDIKNGVWSEDECRRLLEGVVKHGRAWVAVASHVGTGRTPLHCQHTVRQEFSGFDYAGTVRGKRFTPDEDACLCIAVERFGLNWDKVAEDIPGRGKAVLRNRYDRILSQWLQVPYTRGMRASLRELLRGDGDVVSRMAAQFKDIDAAKGWVALELGMDDGSQVDWARVNGASRAERSAALAPWRRR* # PASA_UPDATE: g10667.t1, single gene model update, valid-1, status:[pasa:asmbl_489,status:3], valid-1 NODE_1128_length_13761_cov_41.5665 . gene 6999 12756 . - . ID=g10667;Name=g10667.t1 NODE_1128_length_13761_cov_41.5665 . mRNA 6999 12756 . - . ID=g10667.t1;Parent=g10667;Name=g10667.t1 NODE_1128_length_13761_cov_41.5665 . five_prime_UTR 12442 12756 . - . ID=g10667.t1.utr5p1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 12394 12756 . - . ID=g10667.t1.exon1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 12394 12441 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 12041 12146 . - . ID=g10667.t1.exon2;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 12041 12146 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 11595 11701 . - . ID=g10667.t1.exon3;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 11595 11701 . - 2 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 11309 11395 . - . ID=g10667.t1.exon4;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 11309 11395 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 10998 11079 . - . ID=g10667.t1.exon5;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 10998 11079 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 10654 10860 . - . ID=g10667.t1.exon6;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 10654 10860 . - 2 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 10250 10401 . - . ID=g10667.t1.exon7;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 10250 10401 . - 2 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 9968 10103 . - . ID=g10667.t1.exon8;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 9968 10103 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 9723 9795 . - . ID=g10667.t1.exon9;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 9723 9795 . - 2 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 9396 9564 . - . ID=g10667.t1.exon10;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 9396 9564 . - 1 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 7692 9290 . - . ID=g10667.t1.exon11;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 7692 9290 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . exon 6999 7467 . - . ID=g10667.t1.exon12;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . CDS 7282 7467 . - 0 ID=cds.g10667.t1;Parent=g10667.t1 NODE_1128_length_13761_cov_41.5665 . three_prime_UTR 6999 7281 . - . ID=g10667.t1.utr3p1;Parent=g10667.t1 #PROT g10667.t1 g10667 MAQATVARVVEPSTLEKVTAHLPLKRQLSYQHIASLSSDFDATQSGSLRKHEFFCSLWNGSGTAVTQGRLIVAEASLAFHPLTDGIPTELFYEELMLITFPEGVRAAMTLTAKSSVLQFANLFERDRTAEVIRCLWKGEPLIKRARTYMRQMSSPADAYLAAKRNVVRSTSEMNLQSLDDGHVDTNGSGAFSSDGLCIMEPLDDKYEQAVRKVVIHNRRPSTETIEMRETKPDGSTVILTVTHSRRALTNSPCVDCRVLAARSKCRWHLCGDCCRVNTKPCASHKNSAHKLHIEAEKKKARQKERERRGPCRYFMSGYCINGDRCSFDHGVDSSSRECDYHGVREGLVKTLRVLCASTVGRSDLNAGDKAIMPQSVLMEALHKDLSYPMAFRVTGTKVDGNGKAIVALSRSYSRGDSQPGLSPTVHVGVLDFTAEEGTVYLPDCVVASLALKDGDHVTIAYASLPKGTFVRLQPQSSAWLDVPEEERHTLLELSLGHYQTLTTGTTLSVEYFGVHHQLSVLECRPQSAVSIIDTDITTDVTEPANFTPDRAHAILIPGRAPVNGAAEEGCFAYYVIPSLPPSSSGVCIRVQPISGDPDIYVSQCVARPSRSCYTWCAQEAGACGVSIAVSDAAFQHGRSLYVAVGAIKGEAMFTLSVDGESSPADSAPVVNDPATLTPSNDVSSSDSECDNCGRRIPALTMVMHERNCRRFTRRCAECGVCVSASVADKHALVHHGPPLECDWCGVSMPQLALHAHQTIPADAGCSSSSANGGAHGGAAGTVALASAAAATIATAAPCPKRPVRCGLPFCNLSVPSDTASSHRRMCGDRNIACHLCGDGVRRCDFGYHLEAMHNLDASVIDWLRPLEAQELKQLSGFPGVSSSPTGHVTFSESLSSSSVSRRRHSCDCGAAFDARDDYEVHTLTDCPNREEDFGFDASHEDSSPDADGDADAGEFDVDISIGEDGDEDGDEDGDSGDDSLLSL* # ORIGINAL: g10666.t1 original gene structure, not modified by PASA NODE_1128_length_13761_cov_41.5665 AUGUSTUS gene 3756 6971 . + . ID=g10666;Name=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS mRNA 3756 6971 . + . ID=g10666.t1;Parent=g10666;Name=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS exon 3756 4016 . + . ID=g10666.t1.exon1;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS CDS 3756 4016 . + 0 ID=cds.g10666.t1;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS exon 4298 4661 . + . ID=g10666.t1.exon2;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS CDS 4298 4661 . + 0 ID=cds.g10666.t1;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS exon 5011 5290 . + . ID=g10666.t1.exon3;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS CDS 5011 5290 . + 2 ID=cds.g10666.t1;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS exon 5479 5619 . + . ID=g10666.t1.exon4;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS CDS 5479 5619 . + 1 ID=cds.g10666.t1;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS exon 6020 6971 . + . ID=g10666.t1.exon5;Parent=g10666.t1 NODE_1128_length_13761_cov_41.5665 AUGUSTUS CDS 6020 6971 . + 1 ID=cds.g10666.t1;Parent=g10666.t1 #PROT g10666.t1 g10666 MEVRKGGNDQNGVGRTESFDGADYAGDSMGASNDGGHTTTAAIAQTSGVMMNALLRTARMVVGSIASAVIYVPFCFAVLLQSAADRRGVNTDNWKQEVSRAAWIAGTVGFLILFQFAISIPVGFAASHQLQDSDNVTQILAVSRSAISVFLAILIIIQCLTVFYAIKRKDLRRVRTILLRPKLSVFNILPALSVVFEVFQFGALFVESGRISSAFRDVFGAFLFQNGDGGDEASSVRFRVFFWISATVVVVYSLLLGIFIVLALPLNHPLSPLVFSFLSGTLYITVTSTVMGAIDCVSSDDGLLVVLTKDLRMQCWSAGHVPFAVTAFLSLLFYSSTAIFVASYKGERSSKRVQVRFAPRFQCIERTLKNIFVVVAVLVKTPDASFPVAIALVVSLLVANVMMQPCSYPVLNHCRTLTLSGVVWLGLVGLLAEEVPQSKMGSGAILALLFAGWGVLAAAGIVFAWSGRCMSRKVTRAFKAATAASVIVANTDEQSGFRASLDSNDTSDDDSDYDTPRARESTNVPEVQTGRDVTVASVIEVSVDATGEERKWRTEVGDDSEDTGGRLLQENVFIDGDAEKPPPLGLNAHAAVLARVGVHSDHFGKTRRVRQGSGRRNRTPSGMVVSCVSIPGMDMGDPSVPDADEARALLLEDGTRAMGYGTSAN* # PASA_UPDATE: g5328.t1, single gene model update, valid-1, status:[pasa:asmbl_5851,status:12], valid-1 NODE_3291_length_3810_cov_40.4013 . gene 1474 2731 . - . ID=g5328;Name=g5328.t1 NODE_3291_length_3810_cov_40.4013 . mRNA 1474 2731 . - . ID=g5328.t1;Parent=g5328;Name=g5328.t1 NODE_3291_length_3810_cov_40.4013 . exon 1474 2731 . - . ID=g5328.t1.exon1;Parent=g5328.t1 NODE_3291_length_3810_cov_40.4013 . CDS 1793 2731 . - 0 ID=cds.g5328.t1;Parent=g5328.t1 NODE_3291_length_3810_cov_40.4013 . three_prime_UTR 1474 1792 . - . ID=g5328.t1.utr3p1;Parent=g5328.t1 #PROT g5328.t1 g5328 MRQSQSESHKQGVVSDLDGKAQLLQLTLEELDDLKRLYAIVDQKAKDLEFDNGALADRLKALSSGEEDPAISAMIADLRLDIDHHKQEIRARDASIEQLRAEAARERDCVSQCTLEIGRLTKELSASTKACAELTAQVADLTERLTETQRTANALAVAASSKKSIAAPSFEDFVSLNRTVTELKQENTAMKRRSSMIPSMFPNYELPEISAPSPSQSTRVGNMSPRTASPAGSMTSVAAPIPYKDQDGVVVVQKSSLPFAMQRRGSLAQGVQAATGVTGGNAGGGQAPSKWASSGNARRASSAQINLPRNPL* # ORIGINAL: g5327.t1 original gene structure, not modified by PASA NODE_3291_length_3810_cov_40.4013 AUGUSTUS gene 121 524 . - . ID=g5327;Name=g5327.t1 NODE_3291_length_3810_cov_40.4013 AUGUSTUS mRNA 121 524 . - . ID=g5327.t1;Parent=g5327;Name=g5327.t1 NODE_3291_length_3810_cov_40.4013 AUGUSTUS exon 272 524 . - . ID=g5327.t1.exon1;Parent=g5327.t1 NODE_3291_length_3810_cov_40.4013 AUGUSTUS CDS 272 524 . - 0 ID=cds.g5327.t1;Parent=g5327.t1 NODE_3291_length_3810_cov_40.4013 AUGUSTUS exon 121 191 . - . ID=g5327.t1.exon2;Parent=g5327.t1 NODE_3291_length_3810_cov_40.4013 AUGUSTUS CDS 121 191 . - 2 ID=cds.g5327.t1;Parent=g5327.t1 #PROT g5327.t1 g5327 MPGKRKGKLSNGGSAAAVIAGTDTEGHEYTSVEDMWKKELEDVSEADRSVSAEGDGVTGVTSYKNARWYTAAAGYWESVPATVQVRLGGFRVVLATIDTLVVPFNVS* # ORIGINAL: g2711.t1 original gene structure, not modified by PASA NODE_4850_length_1197_cov_25.1488_potentialcontaminant AUGUSTUS gene 777 1175 . - . ID=g2711;Name=g2711.t1 NODE_4850_length_1197_cov_25.1488_potentialcontaminant AUGUSTUS mRNA 777 1175 . - . ID=g2711.t1;Parent=g2711;Name=g2711.t1 NODE_4850_length_1197_cov_25.1488_potentialcontaminant AUGUSTUS exon 777 1175 . - . ID=g2711.t1.exon1;Parent=g2711.t1 NODE_4850_length_1197_cov_25.1488_potentialcontaminant AUGUSTUS CDS 777 1175 . - 0 ID=cds.g2711.t1;Parent=g2711.t1 #PROT g2711.t1 g2711 MDLDAARKYISERHKTLGSVLNNIRLPVIDKICHELKLTGNYRRLALEKYRSLKTSHGRNHCNVVLLAVAIAFVARHHFLRWVTENAISKVTGVSVGAINTVKNHLASPAAVKAATASRVNGAAMKSVASKS* # ORIGINAL: g2061.t1 original gene structure, not modified by PASA NODE_2501_length_6056_cov_28.2551_potentialcontaminant AUGUSTUS gene 4030 5733 . - . ID=g2061;Name=g2061.t1 NODE_2501_length_6056_cov_28.2551_potentialcontaminant AUGUSTUS mRNA 4030 5733 . - . ID=g2061.t1;Parent=g2061;Name=g2061.t1 NODE_2501_length_6056_cov_28.2551_potentialcontaminant AUGUSTUS exon 4030 5733 . - . ID=g2061.t1.exon1;Parent=g2061.t1 NODE_2501_length_6056_cov_28.2551_potentialcontaminant AUGUSTUS CDS 4030 5733 . - 0 ID=cds.g2061.t1;Parent=g2061.t1 #PROT g2061.t1 g2061 MSDVVAVGFNSLAPETVVHHIVPYLSNVDVSSLAKVNSVLHAHLRGKRLYHLWPLYVRKYVEEPVFCEEVKAAIPVNRIVLEGHVLHPTKDGQVIDRSPKDLSPFAGVHTANIGMCDSSANFSPLRGAHAVDLNLCFGSSRSDVLSHLVDTTVISVSSVELSETLHLSAAQSVSFKDAWGNLQCLEGVPQVDLHFSYFTDLSPLRLAKYVSLNDMDVDDISALANAREIRLMNCPKVMDVSMLKNVRVFVMENCKFTAIPPELGSIHRLELTSPVLRDVSAVRSIHTLILVNCHRIENISALRNVQHTLDLSVGRNTYVGMPTFDVSCLSRLHTLRLDFRPITGISQLGGVHTLSIARAKFNDDDLSSLRSVHTLSLEDTRVADVSSLGHVHTLNLSFCKHLGDLSALSRCYSLNFTAARICDVSLLGEVHTLVLQDTTVSEVSSLGGVHTLDLCNTKCLDVSMLGSVWSLDLSCTKVTNVSALGSVWSLDLAKTPVSDVSMLGGVHFLNLRDCKNVTNVSALGNVHTLYLGGTHVIDVSSLSRVCVLAVDDSLKSELLKGSVRKLL* # ORIGINAL: g3268.t1 original gene structure, not modified by PASA NODE_2618_length_5647_cov_38.3686 AUGUSTUS gene 480 2212 . - . ID=g3268;Name=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS mRNA 480 2212 . - . ID=g3268.t1;Parent=g3268;Name=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS exon 2123 2212 . - . ID=g3268.t1.exon1;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS CDS 2123 2212 . - 0 ID=cds.g3268.t1;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS exon 1866 1910 . - . ID=g3268.t1.exon2;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS CDS 1866 1910 . - 0 ID=cds.g3268.t1;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS exon 1392 1602 . - . ID=g3268.t1.exon3;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS CDS 1392 1602 . - 0 ID=cds.g3268.t1;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS exon 802 1109 . - . ID=g3268.t1.exon4;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS CDS 802 1109 . - 2 ID=cds.g3268.t1;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS exon 480 647 . - . ID=g3268.t1.exon5;Parent=g3268.t1 NODE_2618_length_5647_cov_38.3686 AUGUSTUS CDS 480 647 . - 0 ID=cds.g3268.t1;Parent=g3268.t1 #PROT g3268.t1 g3268 MPGILKVRVIEARDLPVMDRSSMATDAYVEVKFADDSFRTHVCKKTLHPVWNADFRFEVDDVALQDEPLELKVWDQDTISADDTIGKVYIDLNPLLMWGGAQLIAGWFPIYDTLKGIQGEVNVVVKLQLFSDVNRFRDTSCGVQFFGMAMLPPCYRALAIHGFVEELVVNDDPEHQFRDNFRTSRSSNEARQKLFSRLSGELQRKIGLKACIAPGFCDAVSDGAGDVIVTQVLDMGGNAVVGFQQSFDLEGGYGMVCRGIGTACTLATMDDDEQ # PASA_UPDATE: g3269.t1, single gene model update, valid-1, status:[pasa:asmbl_4663,status:12], valid-1 NODE_2618_length_5647_cov_38.3686 . gene 2798 5256 . + . ID=g3269;Name=g3269.t1 NODE_2618_length_5647_cov_38.3686 . mRNA 2798 5256 . + . ID=g3269.t1;Parent=g3269;Name=g3269.t1 NODE_2618_length_5647_cov_38.3686 . exon 2798 3035 . + . ID=g3269.t1.exon1;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . CDS 2798 3035 . + 0 ID=cds.g3269.t1;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . exon 3422 3496 . + . ID=g3269.t1.exon2;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . CDS 3422 3496 . + 2 ID=cds.g3269.t1;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . exon 3641 5000 . + . ID=g3269.t1.exon3;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . CDS 3641 5000 . + 2 ID=cds.g3269.t1;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . exon 5166 5256 . + . ID=g3269.t1.exon4;Parent=g3269.t1 NODE_2618_length_5647_cov_38.3686 . CDS 5166 5256 . + 1 ID=cds.g3269.t1;Parent=g3269.t1 #PROT g3269.t1 g3269 MGRRHQQQAQIGGRRRVLIQLDAGGASHAALSAGGSASASATGSPVPHFHIPTNDDATHLHNGHQQQQQQQQQQQQHSAGNPLTGLIGGYAGSDDDDDDNAAHDAASMDDKVVDFLASLDALETVATAPPAMDSAQAHAHAHTAQHPGQAIEAPTAGSEERAIDGGAVPVLLPGWHVCHDEQSGAPYYWHVETNEVTWDPPVAPVPTQAHTQSHSAVTEVTAHAHAHASGAPVPAAAVARTDAPTQTAIDARLGRRLRTNAEDPDRSDAPSKRQRSDGPLITAHTPATTLTPTPTAATSAATDAPSEDARVRARAVAMDLFARLDFLGVVPSRLSVLEVARVEAAARVADMDAGALDPAHAADRIASSFAQLTAYEDTAAPPGWRCEWNGSAYFFRNEATGHVTHEYPADMMVDAPPLPDEPPPPPPPPGCETTGDATAAPYAAYAQYAQYAPDVYDEAAWREAYAQGGAYGASVAAPYAATAQPPPPSAQPTTAPAAKKRAGRRADVVALGAGRKVSSLVDKWRAVRREGAGSDGDDDDRSDPQQRRLDEWKKKAMSAPEAKHNANFEPLVGDWRARVAKQQQSRE* # ORIGINAL: g1673.t1 original gene structure, not modified by PASA NODE_1049_length_14421_cov_41.0626 AUGUSTUS gene 2985 4149 . + . ID=g1673;Name=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS mRNA 2985 4149 . + . ID=g1673.t1;Parent=g1673;Name=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 2985 3052 . + . ID=g1673.t1.exon1;Parent=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 2985 3052 . + 0 ID=cds.g1673.t1;Parent=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 3253 3356 . + . ID=g1673.t1.exon2;Parent=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 3253 3356 . + 1 ID=cds.g1673.t1;Parent=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 3494 4149 . + . ID=g1673.t1.exon3;Parent=g1673.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 3494 4149 . + 2 ID=cds.g1673.t1;Parent=g1673.t1 #PROT g1673.t1 g1673 MLRCLLGTALFTAIATMVLSLVSMVTVAWYTGSNHNIGLTTDCQSIPTDQGPVSECDGFNPSNASNSKERAMSALMIMTVILSGLAIPLLVFALCTLRALKAIGWTVFTFMLLSFIFLASTLLIFPSNYDWDLVPGTEVGGSMIMAIIAAPLALLTAALAAHAARHRKDPKRMDHERGPRAAHAPGQGSAAPVAASAALGTAAVAVAMSNRGTDSTSAHNASNNSANTGNAAYGMTSAPAPAYNSMPPQQPSNAGYTTTQAGYVGQYNDGRTSNM* # ORIGINAL: g1674.t1 original gene structure, not modified by PASA NODE_1049_length_14421_cov_41.0626 AUGUSTUS gene 4366 4839 . + . ID=g1674;Name=g1674.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS mRNA 4366 4839 . + . ID=g1674.t1;Parent=g1674;Name=g1674.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 4366 4839 . + . ID=g1674.t1.exon1;Parent=g1674.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 4366 4839 . + 0 ID=cds.g1674.t1;Parent=g1674.t1 #PROT g1674.t1 g1674 MPTFVGLAVASLARSIMRPRDGHVHVPHSPPTPGVASRLPLTPVPCREDRPRDPNHGSRCATSARHTQETISCELAAVQGAHRTCGKRADGAGHGGGGAASLKSLKSQRRLLSRTRTVLLSYVLSFALFVASILRRQEGVRRLPVRSPSTKEDALYC* # ORIGINAL: g1675.t1 original gene structure, not modified by PASA NODE_1049_length_14421_cov_41.0626 AUGUSTUS gene 5384 10255 . - . ID=g1675;Name=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS mRNA 5384 10255 . - . ID=g1675.t1;Parent=g1675;Name=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 7796 10255 . - . ID=g1675.t1.exon1;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 7796 10255 . - 0 ID=cds.g1675.t1;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 6891 7598 . - . ID=g1675.t1.exon2;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 6891 7598 . - 0 ID=cds.g1675.t1;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 6354 6578 . - . ID=g1675.t1.exon3;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 6354 6578 . - 0 ID=cds.g1675.t1;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 5843 6064 . - . ID=g1675.t1.exon4;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 5843 6064 . - 0 ID=cds.g1675.t1;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS exon 5384 5530 . - . ID=g1675.t1.exon5;Parent=g1675.t1 NODE_1049_length_14421_cov_41.0626 AUGUSTUS CDS 5384 5530 . - 0 ID=cds.g1675.t1;Parent=g1675.t1 #PROT g1675.t1 g1675 MEIGVDASPGGERSPSSSSPGQWDVERKRMEDDFNAQRAKFRQMYVRLEDSLNEEKRVSKEREGMVESLIIKLTAAEDVISTLRRDLGTAKGEVIAVRTRLEEECVQRRVDGDTAKQALEDCRRRHAEECASLELVINEAMLARDAAESARSELMRQFEQERMSLLSSIERLETAAYQGRLGPRGPAGEDAARVARESDAASNELTVLRGRLAEAEVAKEALRVKLRAVTASVRKPSVSSSMPVAVDADQDAGSEWRSRSPSASAPPPASVPLVPHVGPYTAVATGVSSPSAVDLLLFGADAGAALPLSPGLPSSTLESPQLAMDGNTAASLMDSDVISPASPASVVRASGTAVARISINDAPRASTYDLMAAEQRIFELRKDMDAVRTEALSLESDRRELSAALSASSNECAALRLALDDERATRMQLAATLVEAQKAGFVHVTGSASGSDTSVVGKLFDAIRAPTQRSRSNTASSQDGSTERAAAVSSSVSSPLEMRPQSQQSQLSHSHAPLLSTSPSELLRYTGNRIVSSFSKKNSSPSLVTTSPAAPSRSDSGDALHMGGSGDVWHASANTVAVSTPVAIDGGSARNAAQSDDFDDFETNPFDAPPHSLPSREVPVRMHAASVGSANEDRVRLLKGELDDARRAIERLEVEKAAVEGALDDLRVELSGAKMGLSGICGENEQLRKRLASAEAEMDAARKRLDNLAFQSEALGRTHAATVAELEAARRDLTSLRAERDDGDVTRDVVVQESESLRSEIDALRRAADEWRIRADDAECGHAEAVSDAQAARAELARMIARMEETEKERAALAGDTAEQIKAFEAKHSHLESQFADIHAAIAAAESHKRTAVDLGRRMEEANTALAATREDVKHLAAEREDLLSSLVGLRDRRQREEAEWAGFRGRLESELSQAKRSIEAQKDANVALEKRLMAVQKELAALAKQHQQTTTTGAAGEAMIVGVQGTALTAAASEELKTRCDDLKREVGVLKESLTTERRAAEEQRQSMERTVGELREALSVREADRIALEDKLGALEDTYRKMKAKSRDVITALQTELDALRSSSQPVTSATAGASAGVASPSSTSLGSTASSTTMDSEDASLSIIEAQEAKVRALRERIGAAKELAKDQKPAAGKFVSAEGEALPRGDTVSRGSIAPNRIAAQRSDKPATAADSGAHVTAWEADADVAACRSCNAPFSVARRKHHCRVCGRIFCHECSTRRLDFSENAKGARACDTCYARVMSRRRESALT* # PASA_UPDATE: g1676.t1, single gene model update, valid-1, status:[pasa:asmbl_185,status:3], valid-1 NODE_1049_length_14421_cov_41.0626 . gene 11834 14152 . - . ID=g1676;Name=g1676.t1 NODE_1049_length_14421_cov_41.0626 . mRNA 11834 14152 . - . ID=g1676.t1;Parent=g1676;Name=g1676.t1 NODE_1049_length_14421_cov_41.0626 . five_prime_UTR 14147 14152 . - . ID=g1676.t1.utr5p1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 14090 14152 . - . ID=g1676.t1.exon1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 14090 14146 . - 0 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 13780 13894 . - . ID=g1676.t1.exon2;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 13780 13894 . - 0 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 13514 13603 . - . ID=g1676.t1.exon3;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 13514 13603 . - 2 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 13127 13344 . - . ID=g1676.t1.exon4;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 13127 13344 . - 2 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 12802 12975 . - . ID=g1676.t1.exon5;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 12802 12975 . - 0 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 12431 12460 . - . ID=g1676.t1.exon6;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 12431 12460 . - 0 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . exon 11834 12222 . - . ID=g1676.t1.exon7;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . CDS 11878 12222 . - 0 ID=cds.g1676.t1;Parent=g1676.t1 NODE_1049_length_14421_cov_41.0626 . three_prime_UTR 11834 11877 . - . ID=g1676.t1.utr3p1;Parent=g1676.t1 #PROT g1676.t1 g1676 MGPFVGAMQGVAEFEFESQIVQYAHVGTKARRDVSSDSFYLPASSLSVFLNSTAWNLESATSLDPTLHFFVYVPPADESPLHIRTGEGDDAPVDAFLFSQYGGVVVHNPTSATSGTRDTRGPRTPAVVDVDAVGAMRVFLAQLRVIVGIEPVDHPTAVSSVSVSHARPRKGLCEWELDALLVRRHTLTYARAVQSIVSLCRLVGKVENMVVSDAIAQQVFDAVDLLELSRGALLTGDVERAHNASVRAMVAADGAFFDPSILELLYFPEENLYAIYMPLFLPVAVPILIAVIAQLRRILQRGKDLDARGNARGGGVEVDDIANGMAASHVADRESGMDKKTQ* # PASA_UPDATE: g1672.t1, single gene model update, valid-1, status:[pasa:asmbl_183,status:12], valid-1 NODE_1049_length_14421_cov_41.0626 . gene 210 1843 . + . ID=g1672;Name=g1672.t1 NODE_1049_length_14421_cov_41.0626 . mRNA 210 1843 . + . ID=g1672.t1;Parent=g1672;Name=g1672.t1 NODE_1049_length_14421_cov_41.0626 . five_prime_UTR 210 210 . + . ID=g1672.t1.utr5p1;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . exon 210 426 . + . ID=g1672.t1.exon1;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . CDS 211 426 . + 0 ID=cds.g1672.t1;Parent=g1672.t1;5_prime_partial=true NODE_1049_length_14421_cov_41.0626 . exon 696 848 . + . ID=g1672.t1.exon2;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . CDS 696 848 . + 0 ID=cds.g1672.t1;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . exon 1061 1414 . + . ID=g1672.t1.exon3;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . CDS 1061 1414 . + 0 ID=cds.g1672.t1;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . exon 1615 1843 . + . ID=g1672.t1.exon4;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . CDS 1615 1740 . + 0 ID=cds.g1672.t1;Parent=g1672.t1 NODE_1049_length_14421_cov_41.0626 . three_prime_UTR 1741 1843 . + . ID=g1672.t1.utr3p1;Parent=g1672.t1 #PROT g1672.t1 g1672 SPNPYQKLVLIYDRRLCTRKNIDARLVGKLVKIFNKNYPGRLARVYLLNADRTFRVGFALVKSFLTKEQRDTVAILSQKEDKWQRHLVHDFGAENLQVEFGGTDPFVYDYTFSGEGKEAERVQLLCGIPKSFTPGNRTPTDGSPVSIKRTSSTSADPGSADGRRVSNTGSPSTQTRSVSVSVSVSAESPATSPAGERRDAALSLSRRTSALSVSDATYRRLSADKRELFSEYVIRRNDSKKVRRTSLLAALQDGLVRLESSGDAQSHRSNGLLSRDASISNH* # ORIGINAL: g2178.t1 original gene structure, not modified by PASA NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS gene 243 2692 . + . ID=g2178;Name=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS mRNA 243 2692 . + . ID=g2178.t1;Parent=g2178;Name=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS exon 243 266 . + . ID=g2178.t1.exon1;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS CDS 243 266 . + 0 ID=cds.g2178.t1;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS exon 736 869 . + . ID=g2178.t1.exon2;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS CDS 736 869 . + 0 ID=cds.g2178.t1;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS exon 1049 1170 . + . ID=g2178.t1.exon3;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS CDS 1049 1170 . + 1 ID=cds.g2178.t1;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS exon 1426 2120 . + . ID=g2178.t1.exon4;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS CDS 1426 2120 . + 2 ID=cds.g2178.t1;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS exon 2300 2692 . + . ID=g2178.t1.exon5;Parent=g2178.t1 NODE_3721_length_2894_cov_37.656_potentialcontaminant AUGUSTUS CDS 2300 2692 . + 0 ID=cds.g2178.t1;Parent=g2178.t1 #PROT g2178.t1 g2178 MARALTLPGAGGVLVNHNGRAQALVVDITSCSILSNEAHVFGDANGYSGNAGSGGVLVNYNFFCQDAQHSCVNSSFSGNTGELGGIGGYLSANGGSGAFAFYYISSESNNNSHVVLGSTFDSNFGIVTGTKLCAGAGGLSIFYYLRPSGYGNSVTIRNCTFSRNIGRNEALSSNGMAGALAISSYGASVHNGSYEISHTRFIGNYVSGRNNDYEGTVTVLIFSGGNGNYFVMNDNSYEDNASDRGGSGATFVTTYGTNNAVSMRRNHFARNKAGGSGGGVVLSPFFEFTCTSCSFVNNSASADGGAVATFSPNATFIESVFVGNVARVSGGALCLETTSVTTCNKCTLSANIASTGGAISASKESVLKGIQSNLTSNYAGSASEIFFGGLTMGEFKYATITAIGATSVIFAANGAALAAVSYMSLGNQLSCPKGYEFLSSDAGSIVGCGECPPGG* # ORIGINAL: g5944.t1 original gene structure, not modified by PASA NODE_2797_length_5097_cov_73.8258 AUGUSTUS gene 4707 4964 . - . ID=g5944;Name=g5944.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS mRNA 4707 4964 . - . ID=g5944.t1;Parent=g5944;Name=g5944.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS exon 4707 4964 . - . ID=g5944.t1.exon1;Parent=g5944.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS CDS 4707 4964 . - 0 ID=cds.g5944.t1;Parent=g5944.t1 #PROT g5944.t1 g5944 MYFSFVRRVCASSFPQADLDDKRAVKRDEAESRCKGWGVPYIETSAKTKHNVDKAFFDLLRQIRTDKAAKDTNNSKKSSKKCAIL* # ORIGINAL: g5943.t1 original gene structure, not modified by PASA NODE_2797_length_5097_cov_73.8258 AUGUSTUS gene 1927 3772 . + . ID=g5943;Name=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS mRNA 1927 3772 . + . ID=g5943.t1;Parent=g5943;Name=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS exon 1927 2652 . + . ID=g5943.t1.exon1;Parent=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS CDS 1927 2652 . + 0 ID=cds.g5943.t1;Parent=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS exon 2823 2901 . + . ID=g5943.t1.exon2;Parent=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS CDS 2823 2901 . + 0 ID=cds.g5943.t1;Parent=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS exon 3162 3772 . + . ID=g5943.t1.exon3;Parent=g5943.t1 NODE_2797_length_5097_cov_73.8258 AUGUSTUS CDS 3162 3772 . + 2 ID=cds.g5943.t1;Parent=g5943.t1 #PROT g5943.t1 g5943 MPVAPSTDPADVRFWEWMRAAGFNLHNGIVLQRTADGSRSVVACADIAEDDVLFDIPRPFVLNPSTSDISEHIARANLPPWNALAIALMREATLGDASRWAPYVNILPREFTTVMYWDASDTSLLRGTTVVREMQSDLADMDREYAGSVLPFIRSNPGLIAEQFATLDFFKRLVSIIMSYSFTEGGDAEDQEDGGGGDDDADADAEQVDGTSGAGVATRPAVTSMVPFADILNHNSELNNARLCYDSDKLSMVAITDIKAGSEIYNTYGDLTNGELLRKYGFVNPQDQVPHGVHLYLDDDLIPALSSRNDRQAVVSRLSALQELSLAPSHYYEVFEDEGLSEDLLLAAAAALASDDEFESLRQDPDDFVPLKIGRIDEALSALAEAVSERLSRYAPQQHIDSHVTGAVDRKQRFLEASSHAVIESEKIALHALAEAITHEQGEVARRRAKRSRAAGDGSSASAKRQKTGKK* # PASA_UPDATE: g5942.t1, single gene model update, valid-1, status:[pasa:asmbl_5023,status:12], valid-1 NODE_2797_length_5097_cov_73.8258 . gene 176 1629 . - . ID=g5942;Name=g5942.t1 NODE_2797_length_5097_cov_73.8258 . mRNA 176 1629 . - . ID=g5942.t1;Parent=g5942;Name=g5942.t1 NODE_2797_length_5097_cov_73.8258 . five_prime_UTR 1604 1629 . - . ID=g5942.t1.utr5p1;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . exon 1133 1629 . - . ID=g5942.t1.exon1;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . CDS 1133 1603 . - 0 ID=cds.g5942.t1;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . exon 767 937 . - . ID=g5942.t1.exon2;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . CDS 767 937 . - 0 ID=cds.g5942.t1;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . exon 397 594 . - . ID=g5942.t1.exon3;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . CDS 397 594 . - 0 ID=cds.g5942.t1;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . exon 176 241 . - . ID=g5942.t1.exon4;Parent=g5942.t1 NODE_2797_length_5097_cov_73.8258 . CDS 176 241 . - 0 ID=cds.g5942.t1;Parent=g5942.t1;3_prime_partial=true #PROT g5942.t1 g5942 MAESLSAMLAHCTPSHTILQCIAHDEGDGSVIDAEAASFDRETHSHLMDAIERLAVDRSLPPQDAMKPSDLISLACACGPIMLAGSRIFPQSYSTACELWMSAQLSAKEGVRDAGYVFEGIAKAYAKMCRKGSDSFGTADDFLPYSLAMCAAVELAKFPAVGPSLDAILPPLLRLADHYDVRWKVAAFKSLCHVVEACNPSDLRLNARADVLVECVLTHISMREELLLPWMLQFHCLLLKIVGPPRVLSRTNTVGDYLKDAGVSTVLRDAHFEDKIVIRKIYAKALAVYVQTLGISTAAHLK # PASA_UPDATE: g9838.t1, single gene model update, valid-1, status:[pasa:asmbl_5667,status:12], valid-1 NODE_3170_length_4113_cov_36.2977 . gene 3024 3932 . + . ID=g9838;Name=g9838.t1 NODE_3170_length_4113_cov_36.2977 . mRNA 3024 3932 . + . ID=g9838.t1;Parent=g9838;Name=g9838.t1 NODE_3170_length_4113_cov_36.2977 . five_prime_UTR 3024 3223 . + . ID=g9838.t1.utr5p1;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . exon 3024 3295 . + . ID=g9838.t1.exon1;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . CDS 3224 3295 . + 0 ID=cds.g9838.t1;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . exon 3482 3581 . + . ID=g9838.t1.exon2;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . CDS 3482 3581 . + 0 ID=cds.g9838.t1;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . exon 3802 3932 . + . ID=g9838.t1.exon3;Parent=g9838.t1 NODE_3170_length_4113_cov_36.2977 . CDS 3802 3932 . + 2 ID=cds.g9838.t1;Parent=g9838.t1 #PROT g9838.t1 g9838 MSTTPDRFLGVQRKSLKTNPLLTKSKLGQPKPPVGPLPPSDHVYGIPNPSNAGGAKEVLTKWSQQQRKPDSMPPLDYVTINKCSVKDGALTTREQVRRIA* # PASA_UPDATE: g9837.t1, single gene model update, valid-1, status:[pasa:asmbl_5668,status:3], valid-1 NODE_3170_length_4113_cov_36.2977 . gene 63 2650 . - . ID=g9837;Name=g9837.t1 NODE_3170_length_4113_cov_36.2977 . mRNA 63 2650 . - . ID=g9837.t1;Parent=g9837;Name=g9837.t1 NODE_3170_length_4113_cov_36.2977 . five_prime_UTR 2519 2650 . - . ID=g9837.t1.utr5p1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 2303 2650 . - . ID=g9837.t1.exon1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 2303 2518 . - 0 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 1989 2148 . - . ID=g9837.t1.exon2;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 1989 2148 . - 0 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 1663 1759 . - . ID=g9837.t1.exon3;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 1663 1759 . - 2 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 1215 1357 . - . ID=g9837.t1.exon4;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 1215 1357 . - 1 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 964 1061 . - . ID=g9837.t1.exon5;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 964 1061 . - 2 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 662 710 . - . ID=g9837.t1.exon6;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 662 710 . - 0 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . exon 63 474 . - . ID=g9837.t1.exon7;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . CDS 356 474 . - 2 ID=cds.g9837.t1;Parent=g9837.t1 NODE_3170_length_4113_cov_36.2977 . three_prime_UTR 63 355 . - . ID=g9837.t1.utr3p1;Parent=g9837.t1 #PROT g9837.t1 g9837 MAEAVEAIRGSLQRSNSNFGKGNRFSFTNSNLSSEIKSIQIPVAAPAAEPAPAAPRKTPFIIGVAGGTASGKTTVCELILEQLGERGVDSEKRKVAIVSQDNFYKALTDEQKAMANANNYNFDHPDAFDYPLTEKILADLNEGKPVDIPIYDFKTHSRTTETIRLNSCDVILFEGLLVLYTPEIRDLFHMRLFVDSDADTRLSRRVLRDIAERGRDLDSVLRQYTQFVKPAFEEYVLPTKKYADVIIPRGGDNDVAIDLIVQHIKKILGGHTVRARTDTASSGGDGRGHLRPH* # ORIGINAL: g11658.t1 original gene structure, not modified by PASA NODE_2867_length_4890_cov_75.0841 AUGUSTUS gene 448 1447 . + . ID=g11658;Name=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS mRNA 448 1447 . + . ID=g11658.t1;Parent=g11658;Name=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 448 565 . + . ID=g11658.t1.exon1;Parent=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 448 565 . + 2 ID=cds.g11658.t1;Parent=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 771 1000 . + . ID=g11658.t1.exon2;Parent=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 771 1000 . + 1 ID=cds.g11658.t1;Parent=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 1275 1447 . + . ID=g11658.t1.exon3;Parent=g11658.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 1275 1447 . + 2 ID=cds.g11658.t1;Parent=g11658.t1 #PROT g11658.t1 g11658 HRASDPVNADDMILRSRQEGLGSEVRRRILVGTFVLSRRSYESYYVKAQRVRRLVHDEFSSLLGRWPQTDKNTHAFDVLLAPTTPTTAPSHAVATAGNAAAEYANDVMTVPASLAGVPAMNVPFGVDSVGLPIGLQLISGYMREDVLLRAAAALEAAGVELGRWTRGRRVLE* # ORIGINAL: g11659.t1 original gene structure, not modified by PASA NODE_2867_length_4890_cov_75.0841 AUGUSTUS gene 2029 3974 . - . ID=g11659;Name=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS mRNA 2029 3974 . - . ID=g11659.t1;Parent=g11659;Name=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 3553 3974 . - . ID=g11659.t1.exon1;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 3553 3974 . - 0 ID=cds.g11659.t1;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 3130 3297 . - . ID=g11659.t1.exon2;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 3130 3297 . - 1 ID=cds.g11659.t1;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 2744 2912 . - . ID=g11659.t1.exon3;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 2744 2912 . - 1 ID=cds.g11659.t1;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 2353 2544 . - . ID=g11659.t1.exon4;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 2353 2544 . - 0 ID=cds.g11659.t1;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS exon 2029 2118 . - . ID=g11659.t1.exon5;Parent=g11659.t1 NODE_2867_length_4890_cov_75.0841 AUGUSTUS CDS 2029 2118 . - 0 ID=cds.g11659.t1;Parent=g11659.t1 #PROT g11659.t1 g11659 MLESAVQAHVQRVRLEREGASVSASLHQSTTASTASASSSSAQRIKGAKGASGLSGQRRRTPVQMQSQYQLAIRSNSVLRGLAAATAAASGAEGNEVNRVESLVEDDAEGEVAVGAIASADATTSLEERLGLPHEQPALVRSVYPVRLPLQVRRAKRCRGCEQRLVKPEVKADAATFVSQKGDDAKIAKFQIEKMAMYKIPRITFPRVPVVATGTESHVRIRITNPHAKPCTIRLEPLSGEKATCLQSQSNGKATLPPFEMDVREFRDPTLDDDDDAAQAPVTQSQGELEFAVERSKNTICLNLRIHDVQSIHSPVTIGFALSVKSADFALSIPVQLNLGWATAPA* # ORIGINAL: g7929.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 6297 9966 . + . ID=g7929;Name=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 6297 9966 . + . ID=g7929.t1;Parent=g7929;Name=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 6297 6399 . + . ID=g7929.t1.exon1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 6297 6399 . + 0 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 6542 6674 . + . ID=g7929.t1.exon2;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 6542 6674 . + 2 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 6819 6949 . + . ID=g7929.t1.exon3;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 6819 6949 . + 1 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 7074 7936 . + . ID=g7929.t1.exon4;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 7074 7936 . + 2 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 8719 8780 . + . ID=g7929.t1.exon5;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 8719 8780 . + 0 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 8990 9702 . + . ID=g7929.t1.exon6;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 8990 9702 . + 1 ID=cds.g7929.t1;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 9803 9966 . + . ID=g7929.t1.exon7;Parent=g7929.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 9803 9966 . + 2 ID=cds.g7929.t1;Parent=g7929.t1 #PROT g7929.t1 g7929 MAGNGCARALILASVLIIGLLCVNVCDGAAHRRTRRLDDSIAHFEPLTLDVVHISEVHTRHRRSGGVQPMTVDFEAFDRKFTLHLISNRIHFEDAEFEAVYADGIPRRIDLDKTHFLRGVVQGDRASEVIVSVFDGRLEGIVNAHGESFRIESSHRYFREAHDFNAVMYRASDVDVSPLARAGCLGGAKPPLVVGEEHVRSRNMDETVYSMFSPGYLPAAAPAAQMRRAVDPAKLTCRMHLIAEYTFTLDTIAQMPNVGVGFSEVQKQSEVIRRLVGYLTAADLIYRKTDFNGNIGYGLAVGRITVYFANMPSVHTETSVSLTYLQYFARSSTFDAYCLAHIFSYREFNDGVLGLAYLPAVVSTASDGGICAKNGLNTGLVTTLNFGRRVSTVVTEITFAHEAGHNHGAQFRDESVVCKAASDCTDEVKCDKDNPNGCGAAKAKKNGEGCNCRNTDGTDCALVCEAGQCTKSFCDTLNMTSCQCLSPENRQCTLCCMIGNGTCMSTFDMPSPAKRITLTSTYGCLNNRGWCDSQNAAIGAIPQCKLIAVPNTGDLFSSDTLNAVLSWLKKNWYYVLAGVGGAAVLVGLLKVTYRKKNVGDQGSFGQRMRNSFRRNPGPSKGVPVAAIVVASGGAASYTAKNPDKYKESISMEPVQYVTGPSDVDARRDACRELKRMYPTVDDTIIVSTLKSFQFDVRRAAMQLNEMGYGLAQARAAPRTDYY* # PASA_UPDATE: g7932.t1, single gene model update, valid-1, status:[pasa:asmbl_2704,status:12], valid-1 NODE_181_length_33237_cov_55.3319 . gene 19669 21541 . - . ID=g7932;Name=g7932.t1 NODE_181_length_33237_cov_55.3319 . mRNA 19669 21541 . - . ID=g7932.t1;Parent=g7932;Name=g7932.t1 NODE_181_length_33237_cov_55.3319 . exon 21320 21541 . - . ID=g7932.t1.exon1;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . CDS 21320 21541 . - 0 ID=cds.g7932.t1;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . exon 20494 20828 . - . ID=g7932.t1.exon2;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . CDS 20494 20828 . - 0 ID=cds.g7932.t1;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . exon 19669 20159 . - . ID=g7932.t1.exon3;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . CDS 19847 20159 . - 1 ID=cds.g7932.t1;Parent=g7932.t1 NODE_181_length_33237_cov_55.3319 . three_prime_UTR 19669 19846 . - . ID=g7932.t1.utr3p1;Parent=g7932.t1 #PROT g7932.t1 g7932 MISIRCGTAGGLLVRVATPYELMTPLTSHFLWCSQRGPFPIHPSILYKIVCISISFSFSFIFESFVPPRLKDTKSKMARRPARCYRYCKNKPYPKSRFCRGVPDGKIRIFDLGRKKANVDEFPLCVHMTSNEKEQLSSEALEAARISCNKYITKQCGKDGFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPIGVVARVNIGQPLISVRTKDANKAHVIEALRRAKFKFPGRQKIIVSRKWGFTDFDREEYQKLRGDGVIVPDGAYCKIDNGHGPLKAWIAAN* # ORIGINAL: g7933.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 22160 23680 . + . ID=g7933;Name=g7933.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 22160 23680 . + . ID=g7933.t1;Parent=g7933;Name=g7933.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 22160 22866 . + . ID=g7933.t1.exon1;Parent=g7933.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 22160 22866 . + 0 ID=cds.g7933.t1;Parent=g7933.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 22978 23680 . + . ID=g7933.t1.exon2;Parent=g7933.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 22978 23680 . + 1 ID=cds.g7933.t1;Parent=g7933.t1 #PROT g7933.t1 g7933 MTGLALGGTVNHVSHFDRKHYFYCDLPAGYQITQHRVPVVSGGAVDVDVIFNAGDATAFVVTERVRIQRLQIEQDSGKSIHDAHSRWSLIDLNRAGAALMEIVGEPDIRSAEGAAAFVRKLQLIFRTLGTCDGNVAEGSLRVDANVSVRNKKTFQPTDLGVRVEVKNIAGMRFLQKAIEHEFARQVAEIEAGRPIVRETRMFDAAAGVTRSMRKKEDDTDYRYMPEPDLPPLVVSRDHVQRLRALMPELPDEAKVRFVSQYGISTNDAVKMVSTEGAGAYFEEAVRAAVASDAAMSKSAPSDSTRTALGARVASWIVQDLFGQLNRRNITIANSPLTATHMGEIVALLARDAISTRGMKALLAAKMDGDARSPAELVEALNIAQISDPTVLRKECENLIATKAKEVEESRAGHERVFRALVGMVVRNTGGRAKPELVDLIMRELVYGPGASPSPPQVARMSAKRSHDKS* # ORIGINAL: g7936.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 27624 28166 . + . ID=g7936;Name=g7936.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 27624 28166 . + . ID=g7936.t1;Parent=g7936;Name=g7936.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 27624 28166 . + . ID=g7936.t1.exon1;Parent=g7936.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 27624 28166 . + 0 ID=cds.g7936.t1;Parent=g7936.t1 #PROT g7936.t1 g7936 MAPTEPKNGKTGIKWLLKESGFVDAESLSVAHLLHWIDSDTLGAYSKAPLTHNTEGMTSHAATVEPNAHIDASSPSALNDLVSTVKLKCDGLLAGRSDSAAVAALAAVERVRVGVADVREHPASFSFEPFRAAFKLIVHGSTEWVLRGLPTSRLSVSASLDKLRTAIRSLGDDEIGAWQE* # ORIGINAL: g7935.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 26682 27596 . + . ID=g7935;Name=g7935.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 26682 27596 . + . ID=g7935.t1;Parent=g7935;Name=g7935.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 26682 27596 . + . ID=g7935.t1.exon1;Parent=g7935.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 26682 27596 . + 0 ID=cds.g7935.t1;Parent=g7935.t1 #PROT g7935.t1 g7935 MLSIDIESFPRTLSAIILVDYDNCHIAATQIASMHFDVRLVHVVLFTNRSELATERRDLRLHKNVERRIDRPHLLDGFAVFTVRPMKQEADIAMAMLAARLDLLVPNQCSIGLVSNDAIFESIAYNIANPLTCASSTRTTEEKKPIMRECINVQPVREHAGLAVAQLLGSDRYAIRTLEMADMHTRHARRVHALSDLIRFVRDAAVPAGERNAENDNIADRYHRLLRVVQRFLNDAPPDIVAALHAESLTTATIITSEIVRLGGESKRREPSFVSGYLADVRRFLLERPGRRAHCDDIDVTVRL* # ORIGINAL: g7930.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 12063 14834 . + . ID=g7930;Name=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 12063 14834 . + . ID=g7930.t1;Parent=g7930;Name=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 12063 13157 . + . ID=g7930.t1.exon1;Parent=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 12063 13157 . + 0 ID=cds.g7930.t1;Parent=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 13635 14542 . + . ID=g7930.t1.exon2;Parent=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 13635 14542 . + 0 ID=cds.g7930.t1;Parent=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 14756 14834 . + . ID=g7930.t1.exon3;Parent=g7930.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 14756 14834 . + 1 ID=cds.g7930.t1;Parent=g7930.t1 #PROT g7930.t1 g7930 MPHSSITFLSLPVEVVVCHIIPFLSNKDRAFLARVNSRLRQWLTRNRVYTLKRENAKQYIESAAFRDIVWAHIPRERLALEASRAEVTDVSALGGVHSLVLSGCKGVTDVSALCGVHSLYLLNCNGVTDVSALGGVHSLNLYECNGVTDVSALGSVHSLVLSFCDGVTDVSALGGVHSLELIGCKGVTDVSALGGVHSLDLRDCNGVTDVSALGGVHSLYLSRCNGVTDVSALGGVHSLYLLNCNGVTDVSALGSVHSLMLWVCNGVTDVSALGGVHSLDLRDCNGVTDVSALGGVHSLILIGCNRVTDVSALGGVPSLTLKCDLLGSLDNDIRTHWHRNNDMDSDDDGVGGAGSGHGKMQFRKIDRTSPSRRCTLGKKLYDFNLYFEQELAAFGIDDLAQIKIPKNSGQRTLAKLFLNGLYGHLALRAFRGGLHMTNTSPSKILQSSISFYVNTGMQDQIKQRAMSFHPTASWSFPMRPQQQTVNRCNITGVSCAAAITSYARVKLLHGLQAVGTRALYCDTRLCGDPNNNNMESLLGNDLGQTRSKVGKRYTGPTIKSYAFEPITYEQGVEIINRHYPKIPIGVLDPDDFKKIKVKAKSMFTDASRGAVSKDSNHNITYSSIRSYVMRQHYGGQKDNYMPQDALLSDVKHKHGTTINAPYTATKKKASTMIKYMDCKAPHQRCACKPLNSA* # ORIGINAL: g7937.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 28240 28965 . + . ID=g7937;Name=g7937.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 28240 28965 . + . ID=g7937.t1;Parent=g7937;Name=g7937.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 28240 28965 . + . ID=g7937.t1.exon1;Parent=g7937.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 28240 28965 . + 0 ID=cds.g7937.t1;Parent=g7937.t1 #PROT g7937.t1 g7937 MAKTHDSGAAAARMVADAIIRLSQLPPPLQQYAPPVAMPARSGSGDATRSLATPLHSTSLAVLPTNRIPIPSDAHEGPTVSQLIEAAVGVRERLTKGPIVLPCDAAAVCQCVVDVVDGLQDVGRRPFEFSFNPFRAALKGVLLAALSAHSVKPSARSSTPDLLARLERVVDASFLATCTEAKRLQWRALVDSAYEIYGGVKTAHGGDAGRWMLTRSLRTGCVAGEAIISVLRVLVDLCVAA* # ORIGINAL: g7931.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 17003 18178 . + . ID=g7931;Name=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 17003 18178 . + . ID=g7931.t1;Parent=g7931;Name=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 17003 17068 . + . ID=g7931.t1.exon1;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 17003 17068 . + 0 ID=cds.g7931.t1;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 17158 17226 . + . ID=g7931.t1.exon2;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 17158 17226 . + 0 ID=cds.g7931.t1;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 17315 17375 . + . ID=g7931.t1.exon3;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 17315 17375 . + 0 ID=cds.g7931.t1;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 17471 17619 . + . ID=g7931.t1.exon4;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 17471 17619 . + 2 ID=cds.g7931.t1;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 17708 18178 . + . ID=g7931.t1.exon5;Parent=g7931.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 17708 18178 . + 0 ID=cds.g7931.t1;Parent=g7931.t1 #PROT g7931.t1 g7931 MKDTDLRADGQIASISQFLVTQALPHAYYIPNFITEDEEKMLLEQVYAAPKPKWTILKDRRLQNWGGLPNAKGMVAEDLPRWLSGLGGRLTELGVFPKQPNHVLVNEYLPNQGIMPHEDGPIFDPVIATVNLGSHTVIDFYRFMTDEERECEAPSHSEICEGEKTVGHNSDTVATSVHPSYARRYLFSFVLMPRSLLVLTDSMYKTCMHGIEGRLVDTPCSKWANAVAAGLYVNGGEGGVLPPTPMERSTRVSLTIRHVPKTVKVKLRLGK* # ORIGINAL: g7938.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 29401 32876 . - . ID=g7938;Name=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 29401 32876 . - . ID=g7938.t1;Parent=g7938;Name=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 32715 32876 . - . ID=g7938.t1.exon1;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 32715 32876 . - 0 ID=cds.g7938.t1;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 32047 32616 . - . ID=g7938.t1.exon2;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 32047 32616 . - 0 ID=cds.g7938.t1;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 31160 31268 . - . ID=g7938.t1.exon3;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 31160 31268 . - 0 ID=cds.g7938.t1;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 30375 30782 . - . ID=g7938.t1.exon4;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 30375 30782 . - 2 ID=cds.g7938.t1;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 29401 30035 . - . ID=g7938.t1.exon5;Parent=g7938.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 29401 30035 . - 2 ID=cds.g7938.t1;Parent=g7938.t1 #PROT g7938.t1 g7938 MYGQSADAAKQLWLAHRAKYESVYAKQLATGGIIDLDKEARKYVLDSSKLIYVTLPGQSSDALQPQPVQQMEQSNQQQQQQQPQQQPQQQQQQQQQQPQRNSVLSSALSSESANNNSYNNRRRPEADNSTQHVASRPAARTDPASVASAAKTTCAPRAHEGARGGHRKGRDGGHGHGQPDAPPPHPNSNSNSQAHSQSQSQSQAQYQSHNASAPLRGHGHQKSRAEGVVASDVSGKPTLESASADNLQNDVAVLLFPQWLAGTDHNNDSPFAMTIAASVANDQHNRAIASVSPGDPDCLKDTARTSIVRHRMSYLNGNASLWHYTYAGRIPIDSTCVGNYQRGTWDSTRTRFQPGGACMAGRFNGSDALECLGGKWVVLTGDSNSVNLFDAFTSLFAKTKTFLGKTVRFNVVRCLEPPSVDVRHSDRDAFVDVDGIVVFKLSLRFVQNPRRASSILSGNWTADMWNAMQGWTNRHASGDGDLERCANGPPSKYAKFTRGRYPDALVFGLGLWCVATPPVTYVSSAFEKFNERLAQIPSRMAMTTGGILYHPRFTDDDVRKQDLFVVRAGEVNAFPVVNVREMLCNGYQSRVKIHRDGYHLAKVSLDNIAQAILNQLCERHDPCKHAP* # PASA_UPDATE: g7928.t1, single gene model update, valid-1, status:[pasa:asmbl_2706,status:12],[pasa:asmbl_2707,status:12], valid-1 NODE_181_length_33237_cov_55.3319 . gene 166 3925 . + . ID=g7928;Name=g7928.t1 NODE_181_length_33237_cov_55.3319 . mRNA 166 3925 . + . ID=g7928.t1;Parent=g7928;Name=g7928.t1 NODE_181_length_33237_cov_55.3319 . five_prime_UTR 166 166 . + . ID=g7928.t1.utr5p1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . exon 166 337 . + . ID=g7928.t1.exon1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 167 337 . + 0 ID=cds.g7928.t1;Parent=g7928.t1;5_prime_partial=true NODE_181_length_33237_cov_55.3319 . exon 509 849 . + . ID=g7928.t1.exon2;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 509 849 . + 0 ID=cds.g7928.t1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . exon 1038 2775 . + . ID=g7928.t1.exon3;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 1038 2775 . + 1 ID=cds.g7928.t1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . exon 2958 3170 . + . ID=g7928.t1.exon4;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 2958 3170 . + 0 ID=cds.g7928.t1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . exon 3424 3522 . + . ID=g7928.t1.exon5;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 3424 3522 . + 0 ID=cds.g7928.t1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . exon 3686 3925 . + . ID=g7928.t1.exon6;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . CDS 3686 3883 . + 0 ID=cds.g7928.t1;Parent=g7928.t1 NODE_181_length_33237_cov_55.3319 . three_prime_UTR 3884 3925 . + . ID=g7928.t1.utr3p1;Parent=g7928.t1 #PROT g7928.t1 g7928 QLFIREVNGKLEITNGSPWVVKSQAHLRELLQLGRSHCSVAATEYNKTSSRAHTILQIRLFQHHRDAPDRQRVNKLFLVDLAGSERLSVMPPEGRINPEEVAARQLESRKINKSLTILNACISAIVEGKPVPYRESKLTMVLKESLGGSNSRVIMVAAISPRMYNYAETVGTLRYADIAKSLKSRVAAAPTEKPELLTCLQAFGTSEPPLRIWPNFPVHKCPQVCGCQAVAPSLSLQKLLPSSGGSAKRNEWLLIQQTDTGHCVAPVGPNIRGRFSFNVCVVVSTTSSPVGSRIQLDGSADWISAFYSNYARHFNFQEDMNIRFHCASLERELMLARATQMQTKIQAEEVQLTEKLASNQVGVEKGLVDRTQRHKNEVAMIQAAMQQSAANLASVLQELEASVKEATKFYEDKRISKRKYEEALSKAAQQHEKLKKKHEEKIKTLKKQKEDAQRSFEEYQCLVPRQLASFQDWYKGRRDEIAAKKADIVKLRSDAELTALYASRSIDEWKKANTTGTQQQPRVIYKPEEPQPKAPYLAPLIQSIARTLADEQEKASAQNPSPGAREASTCSARARLRETLGEKIAAKIRAAPGRVCLITQAGTTEAMSAQYLSLLTPTVTADDDNNSNNNSGGEGVLTHAVRQFFDPLTSAHPRPEVSICALNLAKAAVSEDGTAAAAGGTLTAAAVASGVTDVLESLGFARSAKVEPRRDGGGDAEGASAGPVASVAVVDNAERLIGMLAAIAQASRPTSSKACLEAFSRSRSDPSTLTRPFQANPSSLAALAAVENISVTLVWVRVAWTDPETSVVTESRLILVDTCPLYGANDSGSVKSALYSRAWIARKFLGVDVGKTDQSRTGVALWHRDLSLTLVLEDLLGRDLGKKDMLAVVGSLCSTQNPNAIETRVHEATMNFADLTESM* # ORIGINAL: g7934.t1 original gene structure, not modified by PASA NODE_181_length_33237_cov_55.3319 AUGUSTUS gene 24447 25444 . + . ID=g7934;Name=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS mRNA 24447 25444 . + . ID=g7934.t1;Parent=g7934;Name=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 24447 24459 . + . ID=g7934.t1.exon1;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 24447 24459 . + 0 ID=cds.g7934.t1;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 24749 24794 . + . ID=g7934.t1.exon2;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 24749 24794 . + 2 ID=cds.g7934.t1;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 24921 25113 . + . ID=g7934.t1.exon3;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 24921 25113 . + 1 ID=cds.g7934.t1;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS exon 25412 25444 . + . ID=g7934.t1.exon4;Parent=g7934.t1 NODE_181_length_33237_cov_55.3319 AUGUSTUS CDS 25412 25444 . + 0 ID=cds.g7934.t1;Parent=g7934.t1 #PROT g7934.t1 g7934 MADRELYIGKLLWAMPWILCARIPVGIKIADIRWKPGGDSARALGLHSNVHFCFSECTDIQRHGARPWSSFCMASSRPPCNSPEAIPQSFSLST* # ORIGINAL: g2318.t1 original gene structure, not modified by PASA NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS gene 1663 2313 . - . ID=g2318;Name=g2318.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS mRNA 1663 2313 . - . ID=g2318.t1;Parent=g2318;Name=g2318.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 1663 2313 . - . ID=g2318.t1.exon1;Parent=g2318.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 1663 2313 . - 0 ID=cds.g2318.t1;Parent=g2318.t1 #PROT g2318.t1 g2318 MKAAASKQANLRDYFKFAENIPKPEERLASKPSIATLLHSAQPVVITATEQTHYVFTDGSTLGNGKKTAVGGFGVFFGDGDPRNISEPYTNGVPTNQKTELTACIRAIKIVNRTMSHTTPVIICTDSDYTIKCATVWHKAWMKNGWKMKAGEPVKNQELIKELIDLLQRPLTTMRHVRAHKKEPPKDSPDWFFWHGNHQADRLAVEGSRVSAAHHG* # ORIGINAL: g2319.t1 original gene structure, not modified by PASA NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS gene 2988 5405 . - . ID=g2319;Name=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS mRNA 2988 5405 . - . ID=g2319.t1;Parent=g2319;Name=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 4262 5405 . - . ID=g2319.t1.exon1;Parent=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 4262 5405 . - 0 ID=cds.g2319.t1;Parent=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 3298 4135 . - . ID=g2319.t1.exon2;Parent=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 3298 4135 . - 2 ID=cds.g2319.t1;Parent=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 2988 3222 . - . ID=g2319.t1.exon3;Parent=g2319.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 2988 3222 . - 1 ID=cds.g2319.t1;Parent=g2319.t1 #PROT g2319.t1 g2319 MSQQQPAAPTSSGPLIDRLNCNGLGTSIRNHLQSATIQSTSGRDLLSEFDTTLPADLTCRQLREWGELIASDRGNRPKYLATLASLVETKNSLVDNGKLTVHIYRNSESHVPSQIAALKRYKAKDPGDLVSLINGRIYPQPLWQFKKNLVRPGLSLFNTIDGAILLPSKVFVDDSYTPDPADIGLSIYDLERRYIGFRMFRVYVLKKDTPIPPSLRVENDHDNHVTISVLDAHGLAYVGLTGDIVVVPEMEQLPWEAHAVVRCRGSAHVDWPAWFRDDDDGQFVVSALMRIMDGGAFEEYVSVCNVICRLGKIRNVADLSADVIDAIAEVIGEDRYYLDNYLGEASDAIGRLAARMNSIASKLPTEQQCPQGDESNDEDAAEIFDDADTYTATRAIADLIPQLTVRGKQYAAYFVGLEIRTKYRDVGNLATETIASVEAIRQLFRECINICAARGNLNLELFRRVLNKIPDSSIGDYSRSDLNMATATEARNLSTGKMVKIPPKFVKHAINAAHSQGCHPLMLHGSLNAFASGEDKLRLSPLVIRADDENYSIDFTFSRVMMVDDVTKAGSSMRRMRLVVEDRPLGPLFFEFEKADAEDLAKLFCHVKEKVGAWPCEGKTKRGTNCRNKTLNVFTSPPNASISISVRLCWLHTFQLIDIIKLEQDRLETEKLRAQVVEQNARLAAQTAVIAETETLRTQLAAQTAVIAETETLRTQLAAQTAENAELRKKLERANQHA* # ORIGINAL: g2317.t1 original gene structure, not modified by PASA NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS gene 206 1300 . + . ID=g2317;Name=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS mRNA 206 1300 . + . ID=g2317.t1;Parent=g2317;Name=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 206 301 . + . ID=g2317.t1.exon1;Parent=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 206 301 . + 1 ID=cds.g2317.t1;Parent=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 603 661 . + . ID=g2317.t1.exon2;Parent=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 603 661 . + 1 ID=cds.g2317.t1;Parent=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS exon 1011 1300 . + . ID=g2317.t1.exon3;Parent=g2317.t1 NODE_2481_length_6108_cov_22.2334_potentialcontaminant AUGUSTUS CDS 1011 1300 . + 2 ID=cds.g2317.t1;Parent=g2317.t1 #PROT g2317.t1 g2317 PGGFFTEQEGFKVDMVARDVADPLSGNEIGNWGNCGIADGWAAKTLIAGGRGLVAVVDTVVDTAADTAAADTAADTVADTAADTVADTVVVQFDSVTAGLFDSVTAGLFDTAQFDSVAFDFVAFDTEDEQFDSVAAGFDTATAVAEL* # ORIGINAL: g2919.t1 original gene structure, not modified by PASA NODE_5172_length_983_cov_25.2841_potentialcontaminant AUGUSTUS gene 683 907 . - . ID=g2919;Name=g2919.t1 NODE_5172_length_983_cov_25.2841_potentialcontaminant AUGUSTUS mRNA 683 907 . - . ID=g2919.t1;Parent=g2919;Name=g2919.t1 NODE_5172_length_983_cov_25.2841_potentialcontaminant AUGUSTUS exon 683 907 . - . ID=g2919.t1.exon1;Parent=g2919.t1 NODE_5172_length_983_cov_25.2841_potentialcontaminant AUGUSTUS CDS 683 907 . - 0 ID=cds.g2919.t1;Parent=g2919.t1 #PROT g2919.t1 g2919 MYRHRIFTRRPLDEQYWDTRSPTPALSVALPERCYAADATGALLLVGTADRNVLVYDIRNPQKEFKARKVNVNL* # ORIGINAL: g2445.t1 original gene structure, not modified by PASA NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS gene 1396 2030 . + . ID=g2445;Name=g2445.t1 NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS mRNA 1396 2030 . + . ID=g2445.t1;Parent=g2445;Name=g2445.t1 NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS exon 1396 1566 . + . ID=g2445.t1.exon1;Parent=g2445.t1 NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS CDS 1396 1566 . + 0 ID=cds.g2445.t1;Parent=g2445.t1 NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS exon 1752 2030 . + . ID=g2445.t1.exon2;Parent=g2445.t1 NODE_3136_length_4228_cov_62.6639_potentialcontaminant AUGUSTUS CDS 1752 2030 . + 0 ID=cds.g2445.t1;Parent=g2445.t1 #PROT g2445.t1 g2445 MVSKTVLGKDRLIKKDSLMVSKTVLGKERIVKTDSLGTERFAQRENDQDRQSHGLEEIEQDGQSVVLEDCVGGQHRLIKTDSLLCSKTVLRKERMIKTDSLVFPKIGLRREIMIKTDSMLCSKTVLCKDRMIKTESLMVSKTVLGARTE* # ORIGINAL: g8336.t1 original gene structure, not modified by PASA NODE_2035_length_7994_cov_37.0933 AUGUSTUS gene 5040 7443 . - . ID=g8336;Name=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS mRNA 5040 7443 . - . ID=g8336.t1;Parent=g8336;Name=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 7285 7443 . - . ID=g8336.t1.exon1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 7285 7443 . - 0 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 7084 7160 . - . ID=g8336.t1.exon2;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 7084 7160 . - 0 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 6803 6925 . - . ID=g8336.t1.exon3;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 6803 6925 . - 1 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 6477 6603 . - . ID=g8336.t1.exon4;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 6477 6603 . - 1 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 6022 6162 . - . ID=g8336.t1.exon5;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 6022 6162 . - 0 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 5775 5893 . - . ID=g8336.t1.exon6;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 5775 5893 . - 0 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 5425 5539 . - . ID=g8336.t1.exon7;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 5425 5539 . - 1 ID=cds.g8336.t1;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS exon 5040 5120 . - . ID=g8336.t1.exon8;Parent=g8336.t1 NODE_2035_length_7994_cov_37.0933 AUGUSTUS CDS 5040 5120 . - 0 ID=cds.g8336.t1;Parent=g8336.t1 #PROT g8336.t1 g8336 MAPAQLMRPSLNGQHADRLRKALHSIAAGASAGLVEVSLMHPLDTIKTRFQLQVGHNVNDPNHYSSLSDIAKKIIKNEGFGGFYKGILPPILAETPKRAVKFFSFEEYKRLVSPNGDPSRVTPVGLFVAGLASGFTEAVMVNPFETVKVTLQSQRISAAKAMGTFDCARAIIAKDGFGLRGLNKGLTATMMRNGVFNGVYFGSFYTLKKTIPAWGDGHGETLRQILLGFFAGVSGSTANIPFDVAKSRIQGPQPDPNARKYYGVLQSIALVYKEEGLRALYKGWVPKVLRLGPGGAIMLVIYDKMTVFLAKHY* # PASA_UPDATE: g8335.t1, single gene model update, valid-1, status:[pasa:asmbl_3323,status:12], valid-1 NODE_2035_length_7994_cov_37.0933 . gene 49 4611 . + . ID=g8335;Name=g8335.t1 NODE_2035_length_7994_cov_37.0933 . mRNA 49 4611 . + . ID=g8335.t1;Parent=g8335;Name=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 49 161 . + . ID=g8335.t1.exon1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 49 161 . + 0 ID=cds.g8335.t1;Parent=g8335.t1;5_prime_partial=true NODE_2035_length_7994_cov_37.0933 . exon 394 541 . + . ID=g8335.t1.exon2;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 394 541 . + 1 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 823 976 . + . ID=g8335.t1.exon3;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 823 976 . + 0 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 1411 1518 . + . ID=g8335.t1.exon4;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 1411 1518 . + 2 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 1734 1901 . + . ID=g8335.t1.exon5;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 1734 1901 . + 2 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 2247 2377 . + . ID=g8335.t1.exon6;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 2247 2377 . + 2 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 2587 2700 . + . ID=g8335.t1.exon7;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 2587 2700 . + 0 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 2945 3103 . + . ID=g8335.t1.exon8;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 2945 3103 . + 0 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 3249 3390 . + . ID=g8335.t1.exon9;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 3249 3390 . + 0 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 3745 3842 . + . ID=g8335.t1.exon10;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 3745 3842 . + 2 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 4061 4278 . + . ID=g8335.t1.exon11;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 4061 4278 . + 0 ID=cds.g8335.t1;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . exon 4482 4611 . + . ID=g8335.t1.exon12;Parent=g8335.t1 NODE_2035_length_7994_cov_37.0933 . CDS 4482 4611 . + 1 ID=cds.g8335.t1;Parent=g8335.t1 #PROT g8335.t1 g8335 IAIINESTVTGTTRTMTYAQLQDATARVAGLLTSLGVHKGDRVLIYMPMVMEAAVAMLACARIGAVHSVVFGGFAPPELAARINDCKPKVVLSASCGLEPNRIVRYKPLLDEAIRIASHHPHHCVVLQRDMQPATLVEGRDLDWAEAVSRARPHAPVPVDATHPLYILYTSGTTGKPKGVVRDNGGHAVALAHSMEMVYGCTKPGEVFFAGSDIGWVVGHSYIVYGPLMKGLTTVMYEGKPIWPDAGVWWRTIEKHKANVCFFAPTAIRAIKREDPLGKLAAGVSLKSVRALFLAGERSDNDTVRWAENLFKVPVVDHWWQTETGWPMAAQCLGLNPNPNIRHGSAGPPVPGYNISVIDESTRTEMEPNTTGEIVVRLPLPPGCFPTLWHNDKGHHDSYLATHPGYYQTGDAGYYDEDGNLFIMSRIDDVINVAGHRLSTSAFEEVLCSHPSVAECAVIGVSCGLKGQIPIGLVVLKVGADADAKQLETDCEKLIRASIGPVAAYKHTYIVKALPKTRSGKVLRKTMRQIANKENVVVPATIEDISVLESITKILEHAER* # ORIGINAL: g1901.t1 original gene structure, not modified by PASA NODE_2820_length_5061_cov_87.8008_potentialcontaminant AUGUSTUS gene 221 3515 . + . ID=g1901;Name=g1901.t1 NODE_2820_length_5061_cov_87.8008_potentialcontaminant AUGUSTUS mRNA 221 3515 . + . ID=g1901.t1;Parent=g1901;Name=g1901.t1 NODE_2820_length_5061_cov_87.8008_potentialcontaminant AUGUSTUS exon 221 3515 . + . ID=g1901.t1.exon1;Parent=g1901.t1 NODE_2820_length_5061_cov_87.8008_potentialcontaminant AUGUSTUS CDS 221 3515 . + 1 ID=cds.g1901.t1;Parent=g1901.t1 #PROT g1901.t1 g1901 NGSNGLEIALRRSKRCTSTTHALGATQVRTVAAICSAQSHAALIGEAATRGVHAANPTATANGFQATEVTVAARAQGVDGAVPPPPSTRPAGINSPPHRQPTKSMGCPSGGDSFPPASLIGGRLASFLPRWLELIPDPWSWDTISGGLDLGWDQVKPLLGNTPPIFHGMPAQTDVLRATCHEFLEKGLVVDIGSADAPDITPGYYSLFFCVPKKNGKWQGCLALNNAVNNSLRKEHFKMEGMATVRNLLRPDDWMFSIDLRDAYGHIPLAPADRQYFRFVFNGRRYEYTALPFGVTCAPRLFTKVMRPVVAYLRTLGIRCVIYLDDLLFLANNEAEACRHRDSALSLLQTLGFVISWEKSALTPSRSATFLGFIIDSHRMLLRLDKAKRTDVCRAVTTTRKLATTRRLTLRQLAGCLGKLNAVAPAVAPTRYKTRAVADQECRTVRAAMGYSDTSTAGRSRRTRLVGIIPPRLERDVHTATQTGHSGDHGRISLRLGRPHGTLDHTRFLAVMGGGAIKQRTRVLRHRADSIRVPASAAHGHDCPPADGQYHSTSVRESPGRAQPPVDGHLSSTLRVSDADAHSLLRATHSGPLERDGRRSLVGTARLFRLDAQPSIIRRHQSGVGPTLARRFRLSTQHSAPSVRIVPPQTGSHIPRLLRAGHLPREHIWEPPVQHDRACAEDGTTATGDNDHHCTRVAQSTMVPSPLRNALRLSHATSESDGHISAGCHWERSSVPGYDMACDRVSNLGRAQEHRGLSSTARHLLGASVRPSTDTNYGYRWRKWVEHCMRTSSSVLAPSQVELANFLAEQYAGGASASELQQLRSAVSTTVAIATGMTLDVSGDIHRLISGAQRLRPAPGPRYTDSWDIGVVLALFTSWGPTTALPLDLLTRKLIGLLMLSLFARPSDLACISFETIKQVSATRFVLQIRGAKNDRRVALSPPMEIDAFAEQPLLCVLTTLTECLQRTQERRSPHTPDGLFLASRRSRAPAQDILFFDVLGSERISVLMKRNLADAGIDTTVFKGGSGRMAGASYALDQGTDVMAVLACGRWQSFGVFQRFYNRSRPGALPPLRLTGQQRNDGIPAFPNADEPDVAL* # PASA_UPDATE: g5638.t1, single gene model update, valid-1, status:[pasa:asmbl_8858,status:3], valid-1 NODE_682_length_19134_cov_40.9108 . gene 6886 10540 . - . ID=g5638;Name=g5638.t1 NODE_682_length_19134_cov_40.9108 . mRNA 6886 10540 . - . ID=g5638.t1;Parent=g5638;Name=g5638.t1 NODE_682_length_19134_cov_40.9108 . five_prime_UTR 10536 10540 . - . ID=g5638.t1.utr5p1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . exon 8951 10540 . - . ID=g5638.t1.exon1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . CDS 8951 10535 . - 0 ID=cds.g5638.t1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . exon 8615 8730 . - . ID=g5638.t1.exon2;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . CDS 8615 8730 . - 2 ID=cds.g5638.t1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . exon 8339 8420 . - . ID=g5638.t1.exon3;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . CDS 8339 8420 . - 0 ID=cds.g5638.t1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . exon 7763 7995 . - . ID=g5638.t1.exon4;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . CDS 7763 7995 . - 2 ID=cds.g5638.t1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . exon 6886 7510 . - . ID=g5638.t1.exon5;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . CDS 7019 7510 . - 0 ID=cds.g5638.t1;Parent=g5638.t1 NODE_682_length_19134_cov_40.9108 . three_prime_UTR 6886 7018 . - . ID=g5638.t1.utr3p1;Parent=g5638.t1 #PROT g5638.t1 g5638 MRSSFPISKLIISQFSVARHTQISSKMPLAYTKTIEAMLTPIAEAITQFIVVNQDAEQHGLPMPDLHPTAQAVVAAVSNLLELGKQLVGASQEPQIQASMPPACNILTTASDNLLGATKSLQTDPHNAAARKRMLDGAKGLLEGTAAVLEVLDESEVGKIVALANFILQQLAIVHEVKTTQDLVVYVKGISQTLVALAKAVDNRQKELLSTRVQEGLIEAVEVLRKAPLLISALKTVVQNPNDVNAITNRDMTVRQLADAANDVLRLVQLKVVDEKAAAQNAGDRAKDIETIHALFSGFLAGINGLEGLGSGGNLNAHIASILSSTTSIAQQCKDPVRKQGILDAAAKVKDLHQKVVAAAELCRKNPKDAAAARALEDLVCQLDVACSHLERVVGDAIIEDLSSAFDSLTPAVGAALSAAAKSGDKVDLERQATALTNTASVLVRAAKDAAAGSSDVNEVNRIRQLAGAVDRLTPQIIACARIVAANPTDKSAADNLEMLIKDYDTKIKELQGAIDNVTRAEEFVEVAVARIKNEIVVCKAAAKSRNAPQFQSAVSSIESRANRVLQVARKEIENSEDPEYKQKVEQSMNKLQQALPSLLSAAKASYDNPTDAAATTRLDQASDAVCAAMDGVRNAVKVDVDRLVENMKALTADEHAEFEPEPTPVPSNPIAAAAHSLAQETRKWDDKGNTLVKSAKSLSEQMAKMAEFAERPEAKKELITAAKSMAGDIAEIIKMARAVAESCGDKRLKQTLLTLCDRIPTIATQLKIISSVKAANPHDTEADAQLITCAQNLMATVSQTVQAAEAASIKTIRSAANVVVAGIAWKKKVYKKRV* # ORIGINAL: g5640.t1 original gene structure, not modified by PASA NODE_682_length_19134_cov_40.9108 AUGUSTUS gene 15921 19057 . - . ID=g5640;Name=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS mRNA 15921 19057 . - . ID=g5640.t1;Parent=g5640;Name=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 18972 19057 . - . ID=g5640.t1.exon1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 18972 19057 . - 0 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 18560 18705 . - . ID=g5640.t1.exon2;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 18560 18705 . - 1 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 18211 18340 . - . ID=g5640.t1.exon3;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 18211 18340 . - 2 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 17814 17994 . - . ID=g5640.t1.exon4;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 17814 17994 . - 1 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 17488 17593 . - . ID=g5640.t1.exon5;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 17488 17593 . - 0 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 17182 17318 . - . ID=g5640.t1.exon6;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 17182 17318 . - 2 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 16706 16849 . - . ID=g5640.t1.exon7;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 16706 16849 . - 0 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 16287 16375 . - . ID=g5640.t1.exon8;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 16287 16375 . - 0 ID=cds.g5640.t1;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 15921 16026 . - . ID=g5640.t1.exon9;Parent=g5640.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 15921 16026 . - 1 ID=cds.g5640.t1;Parent=g5640.t1 #PROT g5640.t1 g5640 MQVYDGDCFKLNTMIEVVGIISVDPAFASRTEFGIEDDSASRNLPTSVAPRLHCLAHRILHHSNPLLPQPVEGINVCARAFPDVADHAPQLRESILGFLSAAVGGDALAAEYLLLHLLSNVYLRRDVQAIGKLSLNLIGFPPQEPLTTSTLASVVQALSSRCHVFPLTRYNLNRFRMVPYKDYTTNRLKAGVLQVPDGTQVVLDETKLDEGRLEVTGVRNIQALEYLLSWQRVEYDFEFHKKDFDTCQRVLILSNGRSLLKGVDCQVPLRPTAPLPTSFDGLTQDVSGAYRRYFDLMRSLEHEIDAELTKHIENEFVEMRRQNPDGMTVDKFSFLLTLSRLMALSYGRSQLSADDWQRVKMLEAAREERIAALA* # ORIGINAL: g5637.t1 original gene structure, not modified by PASA NODE_682_length_19134_cov_40.9108 AUGUSTUS gene 4546 5748 . - . ID=g5637;Name=g5637.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS mRNA 4546 5748 . - . ID=g5637.t1;Parent=g5637;Name=g5637.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS exon 4546 5748 . - . ID=g5637.t1.exon1;Parent=g5637.t1 NODE_682_length_19134_cov_40.9108 AUGUSTUS CDS 4546 5748 . - 0 ID=cds.g5637.t1;Parent=g5637.t1 #PROT g5637.t1 g5637 MSVICVSYARGPAGDVALVTVSSCRSIVVFDPSSMQPFFSQQFPGSRPWAAVAIGDVVLATSELHASEVCLWDPRSGTLTAIVSTGTAFTMLLHFTCGTHLFAVTSDNRMSIVTVGRDATTTQSNGALSDEGFALGVSVSIRRRLSSYTATTYGPIAFLAHASGVCCMTLAGGFAQRTWESARNVRCVIVVGPSNGASEDSLVPDEPNTWTIIVGDMCGHLARFVGVTLSPSPQSPSRTTTFDTPISPDIDVPNAHRAPLCCATLCGATKSVVATSGLDGLLRLWTTDLVPIATYSAQSLQLVLPSQDYYAYNENSEARGDGASISGGGVSTVSHSDDTHISPGWVTDTRQDDEGVATETLLPPAMHGFRMSATCLATDHAGMLAVGLLTGAVVVAGFID* # PASA_UPDATE: g5639.t1, single gene model update, valid-1, status:[pasa:asmbl_8859,status:3], valid-1 NODE_682_length_19134_cov_40.9108 . gene 10751 15138 . - . ID=g5639;Name=g5639.t1 NODE_682_length_19134_cov_40.9108 . mRNA 10751 15138 . - . ID=g5639.t1;Parent=g5639;Name=g5639.t1 NODE_682_length_19134_cov_40.9108 . five_prime_UTR 14992 15138 . - . ID=g5639.t1.utr5p1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 14553 15138 . - . ID=g5639.t1.exon1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 14553 14991 . - 0 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 14257 14366 . - . ID=g5639.t1.exon2;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 14257 14366 . - 2 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 13860 14110 . - . ID=g5639.t1.exon3;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 13860 14110 . - 0 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 12094 13661 . - . ID=g5639.t1.exon4;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 12094 13661 . - 1 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 11690 11793 . - . ID=g5639.t1.exon5;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 11690 11793 . - 2 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 11367 11552 . - . ID=g5639.t1.exon6;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 11367 11552 . - 0 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . exon 10751 11227 . - . ID=g5639.t1.exon7;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . CDS 10898 11227 . - 0 ID=cds.g5639.t1;Parent=g5639.t1 NODE_682_length_19134_cov_40.9108 . three_prime_UTR 10751 10897 . - . ID=g5639.t1.utr3p1;Parent=g5639.t1 #PROT g5639.t1 g5639 MDGVEISQRKVSQDASPTTFFTANGVNDEHYAPPAFALSKLDPALHPSRVNTPTGEAAVSHIKEDVASSVSEAIMGTEEAVGGVSEGWRHTLEKVVPAVVAIKVCSVRSFDTVAAGYSVATGFVVDAKRGIILTNRHVVTPGPVVSEATFYNHEEVPISPIYRDPVHDFGFYRFDTSKIKFMKVVDIALAPERARVGTEIRVIGNDAGEKLSILAGTLARVDREAPNYGSAHYNDFNTFYLQAASSTSGGSSGSPVVDIDGYAIAINAGGKRKAASSFYLPLDRVVRALRLIQAEEPVTRGTLQTIFRYLPYDEVRRLGMRSGTEAAFRLHFPLATGLLVVDQTVPKGTGDGPLQAGDILVRVQNRRVNSFVVLEALLDESVGQEIVFDIERGGEPRTSKIIVQDLHSIVPTSYLEMGGCVFHTLSYTVARNSSVPVGGVCVAHAGYMLSRSHVPKNSIVLSVNGIDTPTLDDFERVMVSYSDGARVTLRYVALGDRHREQAAVVTIDRRWHAMTRCILNPKTGLWDANPLADAPAALPIEPASTDFGGLCNCSAAAEVRGCSVTVTFDVPHCVSGIAGTNYTGYGLVVDAANGLVLVDRNTVPTTVGDVVISFGGSFEVPARPIFLHPVHNFAIVKYDPALVGDTPVQSAVFSETPLAQRDAVYLVGLTRNSQMVSRTSTVFKIEKMNVPPMSPPRFRATNVEVIHLDNTLQCIGGVLTDSVGRVQALWASYSYQSEGQNHECFRGLPIEIIADVIPSLSQNMEPTIRYLDIEMWPILVADARNQGLSGEWVKRIETACGYRRQVLTVRRLIARSQAQKLLKEGDMILSCNNTPVSAYRDVERIASTVDAVTLTILRNGKEMEVAVPTDRLSGRDITRVVHWAGTLVQEPHRSVAQQAPWPEGVYVSWWSCGSPAHKHELRATVFITEVNGVPTPDLDAFIAQVKALPCDAYARLKVVDLSTKTKVLTIKPDFHYWPTWELAREDGAEWKYKEY* # PASA_UPDATE: g5636.t1, single gene model update, valid-1, status:[pasa:asmbl_8857,status:12], valid-1 NODE_682_length_19134_cov_40.9108 . gene 157 2662 . - . ID=g5636;Name=g5636.t1 NODE_682_length_19134_cov_40.9108 . mRNA 157 2662 . - . ID=g5636.t1;Parent=g5636;Name=g5636.t1 NODE_682_length_19134_cov_40.9108 . five_prime_UTR 2628 2662 . - . ID=g5636.t1.utr5p1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . five_prime_UTR 2397 2425 . - . ID=g5636.t1.utr5p2;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . exon 2628 2662 . - . ID=g5636.t1.exon1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . exon 2078 2425 . - . ID=g5636.t1.exon2;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . CDS 2078 2396 . - 0 ID=cds.g5636.t1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . exon 1749 1901 . - . ID=g5636.t1.exon3;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . CDS 1749 1901 . - 2 ID=cds.g5636.t1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . exon 1276 1475 . - . ID=g5636.t1.exon4;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . CDS 1276 1475 . - 2 ID=cds.g5636.t1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . exon 157 944 . - . ID=g5636.t1.exon5;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . CDS 789 944 . - 0 ID=cds.g5636.t1;Parent=g5636.t1 NODE_682_length_19134_cov_40.9108 . three_prime_UTR 157 788 . - . ID=g5636.t1.utr3p1;Parent=g5636.t1 #PROT g5636.t1 g5636 MFEARFVQGNLLKKILDAVKDLVTDANFDCSRGGISLQAMDSSHVSLVSMLLRSDGFDPYRCDRSLSLGINLASMNKVIKCAANDDIITMKAEDNPDSVTFIFESPKADKVSDFEIKLMDIDAEHLGIPETDYEAIIKLPSSEFQRICSNLQAMGDSVSIAVSKEGVKFSTSGDLGTGNICLKQNATVDGKGESITIEMQDAVTLTFALRYLNFFTKATGLSDHVTLSMSKDVPLVVEYKIGDNGYLRYYLAPKIEDENEEAAGRQEKGDDEDEK* # PASA_UPDATE: g6610.t1, single gene model update, valid-1, status:[pasa:asmbl_6027,status:12], valid-1 NODE_3408_length_3539_cov_36.0219 . gene 272 1689 . + . ID=g6610;Name=g6610.t1 NODE_3408_length_3539_cov_36.0219 . mRNA 272 1689 . + . ID=g6610.t1;Parent=g6610;Name=g6610.t1 NODE_3408_length_3539_cov_36.0219 . exon 272 1027 . + . ID=g6610.t1.exon1;Parent=g6610.t1 NODE_3408_length_3539_cov_36.0219 . CDS 272 1027 . + 0 ID=cds.g6610.t1;Parent=g6610.t1;5_prime_partial=true NODE_3408_length_3539_cov_36.0219 . exon 1191 1247 . + . ID=g6610.t1.exon2;Parent=g6610.t1 NODE_3408_length_3539_cov_36.0219 . CDS 1191 1247 . + 0 ID=cds.g6610.t1;Parent=g6610.t1 NODE_3408_length_3539_cov_36.0219 . exon 1522 1689 . + . ID=g6610.t1.exon3;Parent=g6610.t1 NODE_3408_length_3539_cov_36.0219 . CDS 1522 1596 . + 0 ID=cds.g6610.t1;Parent=g6610.t1 NODE_3408_length_3539_cov_36.0219 . three_prime_UTR 1597 1689 . + . ID=g6610.t1.utr3p1;Parent=g6610.t1 #PROT g6610.t1 g6610 PLPSMPPAATVDTGNPSPIASPGDILPMFLRDSRVPAHSLTIDTAATQAATSTDALLSPGTPRSKRVSFSDGSLPGASKEGIALSSMPGVHAALDAALSGRMSADSAAQAVLGSFGLGGTAALEKPKVEGSEPSLDKQPTKSSLKGSSLASPRGGSAPTTTPSATPPATNDRAVTSALGKGKGKSADSGTKPNSNPNPIHAPNPTPAPKAAGATRESEFVPKTSQQAFTGVIVEKDTHDAQVATDLDFDMRQVNAEYTRMKVQRNGALLTQEPEVQEVTEKPVSRFKAARRGMLS* # ORIGINAL: g6611.t1 original gene structure, not modified by PASA NODE_3408_length_3539_cov_36.0219 AUGUSTUS gene 2464 3326 . - . ID=g6611;Name=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS mRNA 2464 3326 . - . ID=g6611.t1;Parent=g6611;Name=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS exon 3277 3326 . - . ID=g6611.t1.exon1;Parent=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS CDS 3277 3326 . - 0 ID=cds.g6611.t1;Parent=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS exon 2903 3087 . - . ID=g6611.t1.exon2;Parent=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS CDS 2903 3087 . - 1 ID=cds.g6611.t1;Parent=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS exon 2464 2492 . - . ID=g6611.t1.exon3;Parent=g6611.t1 NODE_3408_length_3539_cov_36.0219 AUGUSTUS CDS 2464 2492 . - 2 ID=cds.g6611.t1;Parent=g6611.t1 #PROT g6611.t1 g6611 MCGLLRCGLNTVCLLDVYERTAHTVFGSFEIRGNFTTAQTVLALASTEGDQLLPHHTVQAGHNSLASTGTDGASLLSVLLLAKSMDN* # ORIGINAL: g6488.t1 original gene structure, not modified by PASA NODE_1107_length_13917_cov_39.9457 AUGUSTUS gene 1147 12464 . + . ID=g6488;Name=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS mRNA 1147 12464 . + . ID=g6488.t1;Parent=g6488;Name=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS exon 1147 7116 . + . ID=g6488.t1.exon1;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS CDS 1147 7116 . + 0 ID=cds.g6488.t1;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS exon 7366 7875 . + . ID=g6488.t1.exon2;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS CDS 7366 7875 . + 0 ID=cds.g6488.t1;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS exon 8012 12055 . + . ID=g6488.t1.exon3;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS CDS 8012 12055 . + 0 ID=cds.g6488.t1;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS exon 12357 12464 . + . ID=g6488.t1.exon4;Parent=g6488.t1 NODE_1107_length_13917_cov_39.9457 AUGUSTUS CDS 12357 12464 . + 0 ID=cds.g6488.t1;Parent=g6488.t1 #PROT g6488.t1 g6488 MDSRGGGQASGDTARGICKHFLQGKCMYRNGCKYLHVAPVPQNRIAPMASYDDFAPQYVETGASSMPQMSDERLKEKAQEATKTMLAKEAVTPAFGTSDKKQREAAFKAASEKKSVSVGNKFAALDGVVSDGDASDEFSEESSEDDVEQSDGYVAVKAPTAQEQSTKAAQQQPRQSRPAKQAATPATAPAKKPPHAAAAAAVKKESTPAPAAKTESVPASAPAMKKPAATSVPTATKQPPAKAQPPSQPSPAPTKTGSSTANAPKASARKPAAPGKAAAPAPVKSASAGVSHVPRFANESYVAGDLDLPPLLGSDDDDDESPPSLIEDDDDECPPPLIDDDDDECPPPLIDDDDDIPPLVEDTPTPAEANPTPAKSAAAPSTAKAGPPQHRQVKKDAGTASASALPATGAKKAPTTNESFLSESDFDDSELEYLDSEASDSCPSLDAGSDDDDYITEEDSGENGGQKRRVVMQPNFAKGGVKAIYGVTDPPSDAKGKAASAGLPTNANPQLKKQTAAPTPTPAPTTTPKSQPKSQPKSQSPPSPSDMPALLTDSESDDSALPADRAATTPAGKMVGAPQKFPASKQQKEVQKATSTAKKTAPAAAASKDKADGAGDSSDGLPELIDDTDEDLPDLLSDDNDDSLKKMPPVQKESESAKKKASAAPSGLKPGFLNRPSQTSPTSAAQSAKTPVKPQQLQPNDIEQQYQRYLDSAGDGGASWVGRFAEAGDLGLVRQRLLVAKKGLFRRDFLDTCYGAVKNGRLGIVDELLRRLRSSEITFVSENTRFEVADVLSHEFDNRERLLSLAIARKQVDVALLLIAEYGARPSVEDVHQSLFTNSDGLVSEIVKAANVQEIIRRAQGGSEPWFIEMLKRDAPVEVFGALLDSVFPRDMPGSNGKSLGVWAAQHGRADLAERLIEKYKMTSFLGASSSESPLIVACRTAALDFVKVVFKMGGLAALESPDGSGNTPLLCAVCARPSDGNYARRDELVALLLGHKVNVQARNDDREWAISLALEQPSNDKMLEYLFKDRTISSELETAISRARTDVAAKLVDLAVKKGSFSANGLSIHTFVSESKGGSFVSVVEQLITHGAEVNGRRKKTLETPLHLASDPAMAKLLLTHGALYGLGDNNENTPLHTACDRGDVEVIRELIDAGASATLQNRKGQTAFMISRSKNVRKALQDAVDARTQRMAKAAAAAQATAQATASAAGESNKKRKKKKKTADNEAEGPYDESTRLDELRKGDYKADAAAEAADAEDEDVVENTRTLIERLISGLAEAGFKDPPPDPSASVETEEAVPPSPKVSTPVPLSEQAPGISPDTEATASAAPMSAAPAVPQEYVQPPSDGEDEDVDVANAGERASTVVASTTAGPISIAVAKKSVAVIVHELLSTSFDGLPWEIVFTRAAKEAILNLEGRLRVAIVEKLRLLASGYWTKTLAKGLVGVPPAIRLYEMKLTKGARVLWEKGIDFSERTRMYTDTIRVWSVHLCHDDVPAGIAHVVGCHRLGAHTTMRKRLQAHNKVDAALRDLDGTMLNIPHTYALVDGGTTVTEAATGHFESVLQAASVSVAMPESDSTLYFPPAASSHNSYTIMKFYSLSNELFKVLLRTAIDEQPVGHVDLVFRADQTESNLINLVPSPPSSILLIGRSGTGKTTVAVQRMWAKYRASRMISGADAPVEDASEAAPNTNVAAILSDSQKAHAESIDCAFSRRQLFVTRNKILRDQVRKSFRGQQQVYLEGRGEPFAPVDKLPSSLLPGVIGDAHFPLFLTATEWLGMLDATLPEPFFPRNPDGSVAGSDFNIEWHDEIGSLDALPSLDGNLDDVEDLGKGVVDGDASSAAKGAANSVRREVDYAFFVTHMWPKMVSGNAKAAKSLSASTVFTEIFSFIKGSMLALERDKGRLSLDDYMKLPTKMAPSFRPGESADGSSEDIGRGLIYHLYERYEKIKRDEGCYDIADVIHHIYKQIATHGYRGVRIDSVTVDEVQDFTQAELRLFLLVSNDKNDLFLTGDTCQTIARGVGFRFQDVRTMFHTEAELQQERARKAEQLRVAMETDGADGAAESAVATRVDWQQLVPVNVPRIHQLTVNYRTHSGILDCANAVVEILVNYFPATVDKLARERGHFTGPKPLLLSETNSDDLCVLLVGSDRKASQIEFGAHQVIIVRSQEAKSTLPEEFDGALVMTVFEAKGLEFDDVFLYNFFHDSPADKEWRVVTQYLQEMQAEATSGAVDEVVELTEGTEAPRPLQFDERHHLILGEELKHLYTALTRARVRVAIYDQSVTKRQPMFHFLQSRGLVETVSVLGSDREVTGGLAVGSTSEEWRKRGNNLFESGCFSLAAQCYKKSGDKRFERLALARQLTKRAMLEANERRRKEMFFEAGYHFLSVSCGALAARCFYTAGEFDFASRIYQALQDYRSAAQCMLRSGDREKASEMLVQAGMLDHALQLLRKAKLYERCIQLLEDHPEFKPVGSQTVEHFAQLAAADHHSRKETAAVIRAIERLPLSDQVAFLTRYGYTEQLVKMLTKAGHRAEAAEVLANNGNVTRAAELLDDANASKEERRRAANFYAKVATASKDKGEQEVYLKRALAIYAHLGATDEESGVLLLLGRALNDESLLRDARRKFRSRGNIYGEAVVMLAMLRRSTALPVKRTVDARAGDTTPADPLSIADASQSIRAINDVVEVSRLFYKTAVSLIRRIATIDTSAMSLNASIVAQCERFYGIRRRDEDGLLVVDSANIMYTQLLRDHKIEQGVTDLPGSRGTLFVVDPLGFLKVVAREAAWRSIEALRMAQLSARATLRRVTPCLAASLGVQCIGGDACSKSHLPVDRELIETNFRLGELAALVTFKGRRRAEEFSRFFKESLPEHMHVEAAIDDAKLMSAANVGTQSQPILSSWFDDTVLFEGVDAIYALLHPQCPILQHGVTARRLLAHAAEARTGIVDLMRVRAESEWLACAEERQLADGDLALKIFRMLSDAGCASAFGLLVGRTWLRYRSNLRLKNRTNHGINSSAAASVQDGKVIARLLDDAQHEPRALISAVLRLEFLWGYPSARLRAPSFHNCLDIIEEQGVICLLGLATVVENVVLVPARALRAALATYGRTPTISPGDAIHAAKPLGMMFFLLQEIALQNANQREPSLFISVGERIALVNLVFAVNESASYARLGHGIRFNVCGNVGKYRRSEDEGLSVPKRIQEASKNFLNGGLLASFAADVQSLLNQRGDELMEVHRDAQTGVVTYRPAIVARLFGDKEISVGDAADGSTMQRIDKPPRIRLVDNAESSTVRAAATMLESYRERKVHTAARVIQRSFRSWWRTKNGIVETSTNPDGGEEGALPQYGADEGALVRQLRDRMSALQAKGRGGSGAGAAHCFVCNVASDATHWSMESHAHSLRDFEAYVAVYNSLVCSFLLRVDKLHQRVDKLDILRDAEEEQRLHATKTGIENVWTGIFTVVKMIESLRKWSESAHLASKIHEWDTTFLVRAEQWVCGIEASLEERKRAAAEGKELKVEADEDEELGWTKQESNRKKVQRHNRKGGKGGRRH* # PASA_UPDATE: g6487.t1, single gene model update, valid-1, status:[pasa:asmbl_406,status:12], valid-1 NODE_1107_length_13917_cov_39.9457 . gene 2 516 . + . ID=g6487;Name=g6487.t1 NODE_1107_length_13917_cov_39.9457 . mRNA 2 516 . + . ID=g6487.t1;Parent=g6487;Name=g6487.t1 NODE_1107_length_13917_cov_39.9457 . five_prime_UTR 2 3 . + . ID=g6487.t1.utr5p1;Parent=g6487.t1 NODE_1107_length_13917_cov_39.9457 . exon 2 516 . + . ID=g6487.t1.exon1;Parent=g6487.t1 NODE_1107_length_13917_cov_39.9457 . CDS 4 444 . + 0 ID=cds.g6487.t1;Parent=g6487.t1;5_prime_partial=true NODE_1107_length_13917_cov_39.9457 . three_prime_UTR 445 516 . + . ID=g6487.t1.utr3p1;Parent=g6487.t1 #PROT g6487.t1 g6487 GPNVGVIAGAVVGGGLVVVGVALFLTYRHAQKVGDEKGAERTWQLFSSKPSSLLRETRESPTVFLNPMHPSAAQAPDIELGVRTTNDGIQYANLSLARTAAAPGKTAEPATEYDLVRHNDGTDSGAHLYDEIKKKQEKPEYDVVRR* # PASA_UPDATE: g9326.t1, single gene model update, valid-1, status:[pasa:asmbl_6593,status:12], valid-1 NODE_3810_length_2702_cov_41.6959 . gene 65 1082 . + . ID=g9326;Name=g9326.t1 NODE_3810_length_2702_cov_41.6959 . mRNA 65 1082 . + . ID=g9326.t1;Parent=g9326;Name=g9326.t1 NODE_3810_length_2702_cov_41.6959 . exon 65 177 . + . ID=g9326.t1.exon1;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . CDS 65 177 . + 0 ID=cds.g9326.t1;Parent=g9326.t1;5_prime_partial=true NODE_3810_length_2702_cov_41.6959 . exon 447 540 . + . ID=g9326.t1.exon2;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . CDS 447 540 . + 1 ID=cds.g9326.t1;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . exon 725 829 . + . ID=g9326.t1.exon3;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . CDS 725 829 . + 0 ID=cds.g9326.t1;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . exon 951 1082 . + . ID=g9326.t1.exon4;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . CDS 951 1001 . + 0 ID=cds.g9326.t1;Parent=g9326.t1 NODE_3810_length_2702_cov_41.6959 . three_prime_UTR 1002 1082 . + . ID=g9326.t1.utr3p1;Parent=g9326.t1 #PROT g9326.t1 g9326 NEVDLIFQETDVRAALNRVDGWVEDSSQHTAADGATAREVSCNPDAASRARAMLVKMAEKERLLKELAELEKENEQLTNHISAAHTRVEGLCAVLATKSDEIKKAAIVCADFEKKMSAAN* # ORIGINAL: g8592.t1 original gene structure, not modified by PASA NODE_2706_length_5379_cov_41.3548 AUGUSTUS gene 2247 3080 . - . ID=g8592;Name=g8592.t1 NODE_2706_length_5379_cov_41.3548 AUGUSTUS mRNA 2247 3080 . - . ID=g8592.t1;Parent=g8592;Name=g8592.t1 NODE_2706_length_5379_cov_41.3548 AUGUSTUS exon 2247 3080 . - . ID=g8592.t1.exon1;Parent=g8592.t1 NODE_2706_length_5379_cov_41.3548 AUGUSTUS CDS 2247 3080 . - 0 ID=cds.g8592.t1;Parent=g8592.t1 #PROT g8592.t1 g8592 MAFARSSSSAASTSKKGKKIDADAIIAQCAASENALVLNLSHRDIAIVPGTVAALKRLQRLLVHSNRLLMPPAEITSLSSLVELDLSDNRLTLVPPGLETLTDLELLNLSNNALGMLPAELFALHNLTHLWLNGAQIMSLPAEVAGLSCLQVLGLADNQLSALPAEMGDLSSLRWLNLSRNALVEFPKPLLRLDRLCALYLDRNKIGSIPEGVTKMRGLTHLSFAGNELYALPSIKSLKHLSRLDVRNNRLQERPEGTTNAVVLTDGNPCHVPEVED* # PASA_UPDATE: g8591.t1, single gene model update, valid-1, status:[pasa:asmbl_4865,status:12], valid-1 NODE_2706_length_5379_cov_41.3548 . gene 1 1398 . - . ID=g8591;Name=g8591.t1 NODE_2706_length_5379_cov_41.3548 . mRNA 1 1398 . - . ID=g8591.t1;Parent=g8591;Name=g8591.t1 NODE_2706_length_5379_cov_41.3548 . five_prime_UTR 1218 1398 . - . ID=g8591.t1.utr5p1;Parent=g8591.t1 NODE_2706_length_5379_cov_41.3548 . exon 997 1398 . - . ID=g8591.t1.exon1;Parent=g8591.t1 NODE_2706_length_5379_cov_41.3548 . CDS 997 1217 . - 0 ID=cds.g8591.t1;Parent=g8591.t1 NODE_2706_length_5379_cov_41.3548 . exon 1 385 . - . ID=g8591.t1.exon2;Parent=g8591.t1 NODE_2706_length_5379_cov_41.3548 . CDS 1 385 . - 1 ID=cds.g8591.t1;Parent=g8591.t1;3_prime_partial=true #PROT g8591.t1 g8591 MEGSKRPLRLFLLGIALILAVSTPVTAFKSACPPLLAGVWRATIDASTNTSSIFSYSCDSVKMNTTVSGVLTSTRSFTMQCAQIDGLYSFVLLMSNSSSVRGEFSVGGTLLSAQLVLAAGDLDGAAANISASGVIYNKDVAKPFSGSAYITSALCLADPNDSIFLPAGLYPSIRPAIGPLRFVGEGQDLVKVNYVGTETFTA # PASA_UPDATE: g8593.t1, single gene model update, valid-1, status:[pasa:asmbl_4864,status:12], valid-1 NODE_2706_length_5379_cov_41.3548 . gene 3701 5304 . + . ID=g8593;Name=g8593.t1 NODE_2706_length_5379_cov_41.3548 . mRNA 3701 5304 . + . ID=g8593.t1;Parent=g8593;Name=g8593.t1 NODE_2706_length_5379_cov_41.3548 . five_prime_UTR 3701 3799 . + . ID=g8593.t1.utr5p1;Parent=g8593.t1 NODE_2706_length_5379_cov_41.3548 . exon 3701 5304 . + . ID=g8593.t1.exon1;Parent=g8593.t1 NODE_2706_length_5379_cov_41.3548 . CDS 3800 5304 . + 0 ID=cds.g8593.t1;Parent=g8593.t1;3_prime_partial=true #PROT g8593.t1 g8593 MASGKHLAHFIGAPALSQFRADKLLETIRELIPETTVASVSAQYVHFADLSGELSADASETLARLLTYGPLTGTCAVGVPVGAETTLVIVVPRPGTISPWSSKATDIARNCGLGAVVSRLERGVAYTIGAAATLSAAQIAAVSAGLHDRMTEAVVSNYEDAASFIFERSSPRPLGTVDVVAGGRAALVKANSELGLAMADDEIDYLTDAFTRVLNRNPTDVELMMFAQVNSEHCRHKIFNADWTIDGKAMPKSLFGMIRNTHASNPRGVLSAYKDNAAVVEGAVAGRFFPDPASREYLYHTEPVHILMKVETHNHPTAICPFAGAATGAGGEIRDESAVGRGSKPKAGLTGFSVSNLHIPGLPQPWEEDFGRPARIASALDIMIDGPLGGARFNNEFGRPNLCGYFRTYCERVPTTGADGSASSELRGYHKPIMIAGGMGNIREAHVQKGQISDGSKVVVLGGPAMLIGLGGGAASSMAQGASHADLDFASVQRDNAEMQR # ORIGINAL: g1689.t1 original gene structure, not modified by PASA NODE_1598_length_10271_cov_42.2324 AUGUSTUS gene 4256 5646 . + . ID=g1689;Name=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS mRNA 4256 5646 . + . ID=g1689.t1;Parent=g1689;Name=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS exon 4256 4336 . + . ID=g1689.t1.exon1;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS CDS 4256 4336 . + 0 ID=cds.g1689.t1;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS exon 4511 4590 . + . ID=g1689.t1.exon2;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS CDS 4511 4590 . + 0 ID=cds.g1689.t1;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS exon 4764 4942 . + . ID=g1689.t1.exon3;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS CDS 4764 4942 . + 1 ID=cds.g1689.t1;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS exon 5049 5140 . + . ID=g1689.t1.exon4;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS CDS 5049 5140 . + 2 ID=cds.g1689.t1;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS exon 5509 5646 . + . ID=g1689.t1.exon5;Parent=g1689.t1 NODE_1598_length_10271_cov_42.2324 AUGUSTUS CDS 5509 5646 . + 0 ID=cds.g1689.t1;Parent=g1689.t1 #PROT g1689.t1 g1689 MTQPHVEKLTPFGKLPSVSGGLSAAVLVFGPPFVGRKSLGRRMIEVSKNVAVQIRTSAVMPLPEDSTGTRPRIEYAVVMVDATNRHSLDMASAALRQLGHHYFTGRCCIVVTRVDKPSHYAIELAEVDALADVFDIPVYYCDGSNDAQRSSVAGRIITSLEVALRLRQGVTPLVLRSTDHAMVASTIIQ* # PASA_UPDATE: g1688.t1, single gene model update, valid-1, status:[pasa:asmbl_2083,status:12],[pasa:asmbl_2085,status:12], valid-1 NODE_1598_length_10271_cov_42.2324 . gene 27 3136 . - . ID=g1688;Name=g1688.t1 NODE_1598_length_10271_cov_42.2324 . mRNA 27 3136 . - . ID=g1688.t1;Parent=g1688;Name=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 3061 3136 . - . ID=g1688.t1.exon1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 3061 3136 . - 0 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 2765 2875 . - . ID=g1688.t1.exon2;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 2765 2875 . - 2 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 2155 2532 . - . ID=g1688.t1.exon3;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 2155 2532 . - 2 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 1809 1979 . - . ID=g1688.t1.exon4;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 1809 1979 . - 2 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 1200 1348 . - . ID=g1688.t1.exon5;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 1200 1348 . - 2 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . exon 27 1039 . - . ID=g1688.t1.exon6;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . CDS 482 1039 . - 0 ID=cds.g1688.t1;Parent=g1688.t1 NODE_1598_length_10271_cov_42.2324 . three_prime_UTR 27 481 . - . ID=g1688.t1.utr3p1;Parent=g1688.t1 #PROT g1688.t1 g1688 MELRVGNKYRLGRKVGSGSFGDIYLGTNITNGEEVAIKLESVKSKHPQLQYESKLYKILLGGVGVPHCKWFGVEGDYNVMVLDLLGPSLEDLFNFCSRKMSVKTTLLLADQMIARVEYVHSKNFIHRDIKPDNFLIGLGKKANQVYIIDFGLAKKYRDPKTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVFMYFVRGSLPWQGLKAANKKQKYERISEKKMSTPIEVLCKGFPTEFATYMNYCRSLRFDDKPDYAYLRQLFRNLFTKERYVYDYIFDWTLLKHQQQQQQQQQQGGSQQAAQSAQPTAAGLQISGSSNIAVGGTPAHGASQARTAQPGSASALPSRAASSAQAAHNTSMTVGHSSSQQFLGSSGGGAITSSQGASQPTSRAQSRTAVPGSGVAVGGSAMAIGGVQAYGATSAVPGRVASASTRSPDPRLTSTATAGAVPASASSGLVRSSSSSRQPTAK* # PASA_UPDATE: g1690.t1, single gene model update, valid-1, status:[pasa:asmbl_2086,status:3], valid-1 NODE_1598_length_10271_cov_42.2324 . gene 6091 7488 . - . ID=g1690;Name=g1690.t1 NODE_1598_length_10271_cov_42.2324 . mRNA 6091 7488 . - . ID=g1690.t1;Parent=g1690;Name=g1690.t1 NODE_1598_length_10271_cov_42.2324 . five_prime_UTR 7409 7488 . - . ID=g1690.t1.utr5p1;Parent=g1690.t1 NODE_1598_length_10271_cov_42.2324 . exon 6935 7488 . - . ID=g1690.t1.exon1;Parent=g1690.t1 NODE_1598_length_10271_cov_42.2324 . CDS 6935 7408 . - 0 ID=cds.g1690.t1;Parent=g1690.t1 NODE_1598_length_10271_cov_42.2324 . exon 6091 6663 . - . ID=g1690.t1.exon2;Parent=g1690.t1 NODE_1598_length_10271_cov_42.2324 . CDS 6250 6663 . - 0 ID=cds.g1690.t1;Parent=g1690.t1 NODE_1598_length_10271_cov_42.2324 . three_prime_UTR 6091 6249 . - . ID=g1690.t1.utr3p1;Parent=g1690.t1 #PROT g1690.t1 g1690 MSGISIGATVAVALGGAAAIAAIHRAHKRSQKQLNNVYETEKMVAEYLVLHYGDPDVVCPFPFGPKDATDFPKRCGDECISRAKDAGIKGGRALDLGCAVGRTSFELARYFDDVVGMDLSHAFISTANVLKEKGELGYEMLDQGELSIPAKAVVASDINRTRVTFLEGDACNIPLSVGKFDLIFAGNLICRVPDPIGFLKSIAQFLNPGGMFVITSPYTIMEQYTPKAMWFGGYTKRNADGSTTAVRGRDGIRGALEGDFDFVGEKDMPFFIRESSRKNQWTVADCMAWRKKITA* # PASA_UPDATE: g1691.t1, single gene model update, valid-1, status:[pasa:asmbl_2081,status:3], valid-1 # PASA_UPDATE: g1691.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2082,status:3], valid-1 NODE_1598_length_10271_cov_42.2324 . gene 7758 10165 . + . ID=g1691;Name=g1691.t1 NODE_1598_length_10271_cov_42.2324 . mRNA 7758 10165 . + . ID=g1691.t1;Parent=g1691;Name=g1691.t1 NODE_1598_length_10271_cov_42.2324 . five_prime_UTR 7758 7843 . + . ID=g1691.t1.utr5p1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . exon 7758 7889 . + . ID=g1691.t1.exon1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . CDS 7844 7889 . + 0 ID=cds.g1691.t1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . exon 8167 8345 . + . ID=g1691.t1.exon2;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . CDS 8167 8345 . + 2 ID=cds.g1691.t1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . exon 8633 8713 . + . ID=g1691.t1.exon3;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . CDS 8633 8713 . + 0 ID=cds.g1691.t1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . exon 8905 10165 . + . ID=g1691.t1.exon4;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . CDS 8905 9657 . + 0 ID=cds.g1691.t1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . three_prime_UTR 9658 10165 . + . ID=g1691.t1.utr3p1;Parent=g1691.t1 NODE_1598_length_10271_cov_42.2324 . mRNA 7758 10165 . + . ID=g1691.t1.1.5b6be70a;Parent=g1691;Name=g1691.t1 NODE_1598_length_10271_cov_42.2324 . five_prime_UTR 7758 7823 . + . ID=g1691.t1.1.5b6be70a.utr5p1;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . exon 7758 8345 . + . ID=g1691.t1.1.5b6be70a.exon1;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . CDS 7824 8345 . + 0 ID=cds.g1691.t1.1.5b6be70a;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . exon 8633 8713 . + . ID=g1691.t1.1.5b6be70a.exon2;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . CDS 8633 8713 . + 0 ID=cds.g1691.t1.1.5b6be70a;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . exon 8905 10165 . + . ID=g1691.t1.1.5b6be70a.exon3;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . CDS 8905 9657 . + 0 ID=cds.g1691.t1.1.5b6be70a;Parent=g1691.t1.1.5b6be70a NODE_1598_length_10271_cov_42.2324 . three_prime_UTR 9658 10165 . + . ID=g1691.t1.1.5b6be70a.utr3p1;Parent=g1691.t1.1.5b6be70a #PROT g1691.t1 g1691 MDARSSADVRLLWGIADAPAILSRLFSNSRHVSWLNAIAVYKSTPRLQSIQKRFAFGAEGMLAVATGETVALRHPILLHCDDTLAAVFSVATLTNATRTPSTSIDQLVSFCSYNRGYDASSCLDKRTSARLSGEWRRMQCMLLFESLAPVSVQRRRSIGDTHSAAATTTTATHTLPLPLRNDRFLCHVRLRPMGNVRFGVGVESSADYLGLTELTQATDLTASAMIQQCSRRLDVSLSTDCTAAAALSFIHSLCGFRHATNALISFGARDMRIRVAALTHPARASPSWAMTYAADVSLSRDAAFYQTFGVDGLRVSVPKGGRMRCGIALHSASDGQRPVTWSLGVTADVSLL* #PROT g1691.t1.1.5b6be70a g1691 MGLHVEGWMPDPAPMCGCCGVSVGVIVMRECGVKWDRGATLSHLRAHSSQTHIQYRYTYIYMSIYPHNNQTHTEHTDTQGIQTQIHTTPLQEISTCDRLIQTYTQPLPTCTRATADAPAILSRLFSNSRHVSWLNAIAVYKSTPRLQSIQKRFAFGAEGMLAVATGETVALRHPILLHCDDTLAAVFSVATLTNATRTPSTSIDQLVSFCSYNRGYDASSCLDKRTSARLSGEWRRMQCMLLFESLAPVSVQRRRSIGDTHSAAATTTTATHTLPLPLRNDRFLCHVRLRPMGNVRFGVGVESSADYLGLTELTQATDLTASAMIQQCSRRLDVSLSTDCTAAAALSFIHSLCGFRHATNALISFGARDMRIRVAALTHPARASPSWAMTYAADVSLSRDAAFYQTFGVDGLRVSVPKGGRMRCGIALHSASDGQRPVTWSLGVTADVSLL* # PASA_UPDATE: g3018.t1, single gene model update, valid-1, status:[pasa:asmbl_8277,status:12], valid-1 NODE_5780_length_718_cov_60.9379_potentialcontaminant . gene 190 714 . - . ID=g3018;Name=g3018.t1 NODE_5780_length_718_cov_60.9379_potentialcontaminant . mRNA 190 714 . - . ID=g3018.t1;Parent=g3018;Name=g3018.t1 NODE_5780_length_718_cov_60.9379_potentialcontaminant . five_prime_UTR 657 714 . - . ID=g3018.t1.utr5p1;Parent=g3018.t1 NODE_5780_length_718_cov_60.9379_potentialcontaminant . exon 190 714 . - . ID=g3018.t1.exon1;Parent=g3018.t1 NODE_5780_length_718_cov_60.9379_potentialcontaminant . CDS 190 656 . - 0 ID=cds.g3018.t1;Parent=g3018.t1;3_prime_partial=true #PROT g3018.t1 g3018 MHSRACRLSVASCQRWTTADPDDYTVAKLVRQGWFDFVIRKNNLAMLRYLCEHLDVVGIYADGPETNGAVDAAEMGLVDIMSYMIDVNSRIAPVMESAAAARPKAFHLQRRPFDLRDTLEIAVWSGHVCLARLLSRRVPGLRLSLAKACESRRWS # ORIGINAL: g6486.t1 original gene structure, not modified by PASA NODE_6024_length_656_cov_412.933 AUGUSTUS gene 1 656 . - . ID=g6486;Name=g6486.t1 NODE_6024_length_656_cov_412.933 AUGUSTUS mRNA 1 656 . - . ID=g6486.t1;Parent=g6486;Name=g6486.t1 NODE_6024_length_656_cov_412.933 AUGUSTUS exon 1 656 . - . ID=g6486.t1.exon1;Parent=g6486.t1 NODE_6024_length_656_cov_412.933 AUGUSTUS CDS 1 656 . - 2 ID=cds.g6486.t1;Parent=g6486.t1 #PROT g6486.t1 g6486 STGAGSKVVLRVVRERGSFFEQTVSWTSSGNAGQYTPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSVSQRVSEEDVDGKGSVVALLIVRTGGAFTEQTVSWTTEGPAGQFSPTSGSVSFGDGIVEMTVLISVLADDVPELDQTVAFGLTEVVGGGRIDENGVAGAFTILENDDAR # ORIGINAL: g10400.t1 original gene structure, not modified by PASA NODE_1458_length_11166_cov_36.3482 AUGUSTUS gene 139 4374 . + . ID=g10400;Name=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS mRNA 139 4374 . + . ID=g10400.t1;Parent=g10400;Name=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 139 660 . + . ID=g10400.t1.exon1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 139 660 . + 0 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 902 999 . + . ID=g10400.t1.exon2;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 902 999 . + 0 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 1238 1755 . + . ID=g10400.t1.exon3;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 1238 1755 . + 1 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 2073 2448 . + . ID=g10400.t1.exon4;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 2073 2448 . + 2 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 2715 3108 . + . ID=g10400.t1.exon5;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 2715 3108 . + 1 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 3382 3499 . + . ID=g10400.t1.exon6;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 3382 3499 . + 0 ID=cds.g10400.t1;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS exon 3896 4374 . + . ID=g10400.t1.exon7;Parent=g10400.t1 NODE_1458_length_11166_cov_36.3482 AUGUSTUS CDS 3896 4374 . + 2 ID=cds.g10400.t1;Parent=g10400.t1 #PROT g10400.t1 g10400 IDPFGHSNFAAYLSILAGFEAHVISRISYTDKNDMQSNGTMEFMWQPVPHSGPNGPQIFTHLMDQWSYCTPENIPFAPSQDAGGFYWDGYAVFPRPADDDFPHKSVPVTSDNIGAYADFFVANARLRGSWYAAANGGHVLWPWGCDKQHFNSTFEFDEMDAIISHINANYANITVEYATLADYFSAIRSAPRTWHIRGSQDFQPYESEPHAFWSGFYTSRPVLKGQARSAQSLLAVLHSAIALHQVYSAPDASLASAESALDSASGKMQHHDAVTGTESVTVAREFADELVNASVGATAAMSAWAEDFLFGGSGDGHVRVYTMRTDDAAAGDAQPLSAPDREGGGHVVLAVWNALGRPVRRSVAVPVSCEWAAQGLAVAGNDGSVVISAADVVAGPSGCVLHFAVWLPAAGYARYTLSTASTNPVPVTSHAPASASHVTISNGLHTLVFDAVNGVLASIAAEGFSIDASDGLFEYPSATNVSAGQQVSSNYYFRPSGPAEPVDGRPTLTVAIGAFVSEVTVTHSRSHSTTYRLKNRSSAPDDAYIEAAHVIGPLGGNRECILRLSTSLRTEGLWLTDSNGAWMETRARRNDLSEPIAGNYLPMAAMAGVVQRGDSGGRLLVASDRAHGVTSLKDGEIEFMLHRRLLVDTSGIYDITLNDTTVAHPVFFLSLSSAAEGVDDSPHAAGYTMARLLNNPPVVFARSFPASPLARSSASTNLSDITGRPVYDVLSLVCADVPSAVHLVTVRRSAVPHPGLVGVLVRLYVPPGGDGVTGAHDVDVRELFACKCKFVGVVETSATANTANEGPEIESGMVTLHTGQLRTFIVRMDCGAGH* # PASA_UPDATE: g10401.t1, single gene model update, valid-1, status:[pasa:asmbl_1662,status:12],[pasa:asmbl_1663,status:12], valid-1 NODE_1458_length_11166_cov_36.3482 . gene 5156 10549 . - . ID=g10401;Name=g10401.t1 NODE_1458_length_11166_cov_36.3482 . mRNA 5156 10549 . - . ID=g10401.t1;Parent=g10401;Name=g10401.t1 NODE_1458_length_11166_cov_36.3482 . five_prime_UTR 10518 10549 . - . ID=g10401.t1.utr5p1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 10444 10549 . - . ID=g10401.t1.exon1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 10444 10517 . - 0 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 10110 10207 . - . ID=g10401.t1.exon2;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 10110 10207 . - 1 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 9677 9821 . - . ID=g10401.t1.exon3;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 9677 9821 . - 2 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 9346 9481 . - . ID=g10401.t1.exon4;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 9346 9481 . - 1 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 9059 9184 . - . ID=g10401.t1.exon5;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 9059 9184 . - 0 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 8525 8641 . - . ID=g10401.t1.exon6;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 8525 8641 . - 0 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 7898 8040 . - . ID=g10401.t1.exon7;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 7898 8040 . - 0 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 7373 7451 . - . ID=g10401.t1.exon8;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 7373 7451 . - 1 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 7036 7165 . - . ID=g10401.t1.exon9;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 7036 7165 . - 0 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 6667 6811 . - . ID=g10401.t1.exon10;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 6667 6811 . - 2 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . exon 5156 6108 . - . ID=g10401.t1.exon11;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . CDS 5442 6108 . - 1 ID=cds.g10401.t1;Parent=g10401.t1 NODE_1458_length_11166_cov_36.3482 . three_prime_UTR 5156 5441 . - . ID=g10401.t1.utr3p1;Parent=g10401.t1 #PROT g10401.t1 g10401 MALECLRQELTPLRQEPDRLHKLSRLMMCRNADDLRARAEWKGAGQESRLKLLTDLQAYIPPWVMVPEGRMEQLIAQGLQLQTHNCMYHNTTDDEISLLEDHKCDRDQIPCETQHTFEQHTDEVWFVRFSHNGKKLASASKDKTIMIWDMTEFRHVHTLVGHSDALSFVAWSPNDKMLLSCGNDNKIKMWDAETGVCLHTFSRHSNSVTSCAWCPDEKRFISGSLDQNLFLWDIHGNILRNWHAGRVADLAITSDGNRVVVITHDKKIRIYGINDDYEDVIEESESLTSLCLSRDDKNVLVNLSLQEIHVWNLETRTMTHKYVGHRQGRYVIRSGFGGTNDTFVVSGSEDSKVYIWHRHHAKLLDVLVGHAATVNSVCWNPKNPYMFASASDDHSIRVGATTRRFVGHTGDVLSVAFSADNRQIVSGSRDKTIKLWNTLGECKYTISDEGHSEWVSCVRFSPNTANPIIVSSGWDRLVKVWNLSNCKLRTNHIGHAGYVNGVTVSPDGSLCASGGKDGVAMLWDLNDGKHLYTLEANDTINTLCFSPNRYWLCAAAGPAIKIWDLESKQLVDDLKPEAVGNDKKSLLQCTSLAWSADGQTLFAGYTDNLIRVWQVSRSA* # ORIGINAL: g10710.t1 original gene structure, not modified by PASA NODE_833_length_17202_cov_43.235 AUGUSTUS gene 14230 17066 . - . ID=g10710;Name=g10710.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS mRNA 14230 17066 . - . ID=g10710.t1;Parent=g10710;Name=g10710.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 14230 17066 . - . ID=g10710.t1.exon1;Parent=g10710.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 14230 17066 . - 2 ID=cds.g10710.t1;Parent=g10710.t1 #PROT g10710.t1 g10710 ARNPVVKKQTVQSGPLGDVNDFEPDEEVDDSFWGDGGAPRAERTVPGMLDSEDDDLGGNPMVAGDEDLDTPDELDEPSPPPPSSKKSDTKTKKEERKKELDAVPAAVAVLHKTADKAKAISTVGGPAPSQKKSSEASAPAAAPLPSAAVAVAVEPAKPKVVATSSVSETKTHKATSKSKSKSKKTHASDDSDSDDSSGSDLWEMAKPAAAAHKGLRGSDDDGDSDGGGNALVLGDLDDFYGDTGDSKKKKKSSAKEVAASVSVKSSKDSKARRRESEGNGSSKHSKVSLCETGVSAEVVEDASAGKKDKKERKDKKDKKDKKDKKEKRREGEGESERRSSRHVGSEGEGDDAETDRRKKKDRKEKKEKKVKNEKKGKKDKRRDDASDGSGDEGSSQAGLVSVLPAANSTPLAGKVSATTPKAMNDLAFLADVFSAPVAAPVTASPADDTLAPSVATENSGPSELSRGGAADAQVASVVADGADVATNGSVVAASSSTAAPVPMREAGNAVSAKATDGSDSDVEDEGSAKAAIDTTAPMRTEPVSTHSVAVSVAATARGVVDRENSDEDGNDSGSDASSESGKAFANPLVLGDAEPDWLKSDSDDSNPPPAKSATPAASNAGNRVGGAVTSTAKETAITSSTNKHSHESAHTPAAGKASAGAAAVASPKVQPSSVLKVAPATAPIVQPSSPNAATKTQPPSQKAKVAAVSDDVSDDDDGINPLVARDEDPDWLDGSEDETPPPASKAHVKSSGGKRAPAFAVQDDEDDDDDDDGAIGGGEVDFAAISAAISATNTASASGTAKKAATVAVSPAVLAQQQQVLSAGLAIFGRGSKGYDSQDMSEGAEEEEEDGGYSGFGAAYEDGGVDVLGGGGSGGGLAGGAGYEGFGSGDHLNGSGIKKEKKEKKPKKDKKDKKKGASTGERVRTIVQACDSTVAECSWSIFDA* # PASA_UPDATE: g10706.t1, single gene model update, valid-1, status:[pasa:asmbl_9598,status:12], valid-1 NODE_833_length_17202_cov_43.235 . gene 2208 5644 . + . ID=g10706;Name=g10706.t1 NODE_833_length_17202_cov_43.235 . mRNA 2208 5644 . + . ID=g10706.t1;Parent=g10706;Name=g10706.t1 NODE_833_length_17202_cov_43.235 . five_prime_UTR 2208 2389 . + . ID=g10706.t1.utr5p1;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . five_prime_UTR 2571 2647 . + . ID=g10706.t1.utr5p2;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . exon 2208 2389 . + . ID=g10706.t1.exon1;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . exon 2571 2773 . + . ID=g10706.t1.exon2;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . CDS 2648 2773 . + 0 ID=cds.g10706.t1;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . exon 2972 4444 . + . ID=g10706.t1.exon3;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . CDS 2972 4444 . + 0 ID=cds.g10706.t1;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . exon 4726 5188 . + . ID=g10706.t1.exon4;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . CDS 4726 5188 . + 0 ID=cds.g10706.t1;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . exon 5523 5644 . + . ID=g10706.t1.exon5;Parent=g10706.t1 NODE_833_length_17202_cov_43.235 . CDS 5523 5644 . + 2 ID=cds.g10706.t1;Parent=g10706.t1 #PROT g10706.t1 g10706 MSSRKTKRVSDDEDGLEEQLLSLASKKKDTSKKRRRDSDSDEPKKRPAKKRAPASRRKRKSESSDDSDDSDDSSDDDSSSSGSSSSSSEGSDVDSGAEFKDEWGDDMMGDAEDRRRLAAMPEREREQVILDRYEQRDRMKERFELRKQMKLNRRKDAGKKDKKTSKGKKPTKKAKKALADKSKASSKASKGKGEKRGSSRRKDDSSAEESESASTSSGGDDGDYGGSGRRTTRSSKRIAETPEGESGRSGQRDRHQSVEQMRAKRSADADRNEELFGRSGGEDSDADSDGGKDRRVSISRSRAPLSAGSRERSSYKPSYGDDKESKESQRHSATLEEMARVQIRRAHLKSWIHFEYFENFVVGFFVRVHIGVDKTRLDPLTKMPARVYRLAEIVSVQKGVSYEFDGTRADKHLLLRVGKEGGEKRFPARMVSNDRLTESEFGNFKRLEEEFGIDLPTSGSASQLAKRLMEQLAYQPTDEEFNSMLESKRRLNPTNATVLEGDRIRREIQIKEQTGETDGIDELKSRLEDVDQQLKRMHDQRDEGLSVIDKINERNRRKNIVDVHKAFVEAWKRDTGSGHASDGHESAADPFERRKCRPLLVRHTNSPSKNKRPEEEAAAGVHDAASDDAGGSAMHTATGTPALSSQVASPAPASVAGVNAAASTRKVDDPYKAHDFDFDIDIDVGSDRKDGPAGGGASLGGKKRPEDLLGAKRALSIVDYKRKRGLI* # PASA_UPDATE: g10705.t1, single gene model update, valid-1, status:[pasa:asmbl_9600,status:13],[pasa:asmbl_9602,status:12], valid-1 NODE_833_length_17202_cov_43.235 . gene 166 1879 . - . ID=g10705;Name=g10705.t1 NODE_833_length_17202_cov_43.235 . mRNA 166 1879 . - . ID=g10705.t1;Parent=g10705;Name=g10705.t1 NODE_833_length_17202_cov_43.235 . five_prime_UTR 1840 1879 . - . ID=g10705.t1.utr5p1;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . exon 1749 1879 . - . ID=g10705.t1.exon1;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . CDS 1749 1839 . - 0 ID=cds.g10705.t1;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . exon 1252 1439 . - . ID=g10705.t1.exon2;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . CDS 1252 1439 . - 2 ID=cds.g10705.t1;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . exon 166 1132 . - . ID=g10705.t1.exon3;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . CDS 980 1132 . - 0 ID=cds.g10705.t1;Parent=g10705.t1 NODE_833_length_17202_cov_43.235 . three_prime_UTR 166 979 . - . ID=g10705.t1.utr3p1;Parent=g10705.t1 #PROT g10705.t1 g10705 MPKVRSKQKIPEGWDLIEPTLKELEQKMREVEADPHDGKRKVEAMWPIFRVHHQKSRYIYDLYYKRKAISKELYEWCLKENIADKNLIAKWKKQGYENLCCLRCIQPRDTNFGTNCICRVPKTKLEEDKVVECIHCGCRGCSG* # ORIGINAL: g10708.t1 original gene structure, not modified by PASA NODE_833_length_17202_cov_43.235 AUGUSTUS gene 8999 9927 . - . ID=g10708;Name=g10708.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS mRNA 8999 9927 . - . ID=g10708.t1;Parent=g10708;Name=g10708.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 9818 9927 . - . ID=g10708.t1.exon1;Parent=g10708.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 9818 9927 . - 0 ID=cds.g10708.t1;Parent=g10708.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 8999 9200 . - . ID=g10708.t1.exon2;Parent=g10708.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 8999 9200 . - 1 ID=cds.g10708.t1;Parent=g10708.t1 #PROT g10708.t1 g10708 MAETANESPRGANVMDALLGSFLPQLDQVVARIEELNVKQRALRLAEKAQEDMTRNSEKERMLAAQPSASLRSMMEQEDAQRDASRTPPPAATVTPPAEAKAP* # ORIGINAL: g10709.t1 original gene structure, not modified by PASA NODE_833_length_17202_cov_43.235 AUGUSTUS gene 10325 13129 . + . ID=g10709;Name=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS mRNA 10325 13129 . + . ID=g10709.t1;Parent=g10709;Name=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 10325 10403 . + . ID=g10709.t1.exon1;Parent=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 10325 10403 . + 0 ID=cds.g10709.t1;Parent=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 10604 11947 . + . ID=g10709.t1.exon2;Parent=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 10604 11947 . + 2 ID=cds.g10709.t1;Parent=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS exon 12360 13129 . + . ID=g10709.t1.exon3;Parent=g10709.t1 NODE_833_length_17202_cov_43.235 AUGUSTUS CDS 12360 13129 . + 2 ID=cds.g10709.t1;Parent=g10709.t1 #PROT g10709.t1 g10709 MERPAVTVKRKDRLFATKSEIVQLILVYLQQEGYRRSWTVFKDECGESTPRSRSKRPLKHLSFILSDYLRLKHEEDQRNAVAQTFSSNQAAADLIKNVYSLLEVVILQPPPAAAASTASTASTASAGATCPSTVATRQKKTPATADAAAINAARASAARRATSGVNTALRGSGKGAMLNPTPASLIDDGDEDEQDASSNEDNMQHLDHMTPFAGGQGLMGMRTDNAAVAASSPHPDSARDHGVSSVSFASTNLLSALNGASSEGDAALARASESDRQLFGMNNARTADGRGGDGARGARGQSAHSLSAPGDIVHRGSKKRKATRHAHVPTHDASGMAYEQMVATPAKGTGDAGMQSASSSPLRSFMAQLLSMPMAALEQPEMTQKLAEGINRYVLNSGGGAEGWQQSNGDGDVGVEGMGAGEGDATCAGRRDEGGHSATGNEDLGMDSTDGISARISNFVEEMPFLKELFATIGGHVPVIGSALRNHATDDDDDDIIEEEAEALDPPPKKQRVSPLHQIQQQQQQQQQQHQQQVHLLQQQQFQQQQQQQQQQQLLHHLQTQNQVQQSRQHQQQPQEVDQERRGYPQQRQAIQQPSPTGTINPTTADGHAVHAELLRQHFTPPDAQVSRRPCPHSASRNQQPLATVGGLGTNAGMRTSPHVGAAMHSETAVRVGGAAVGGHSATSAPALLPSRTTGEWQPLSGAGDHHVHDAGAVAEEEDVDDFLSSLHYE* # PASA_UPDATE: g10707.t1, single gene model update, valid-1, status:[pasa:asmbl_9599,status:3], valid-1 NODE_833_length_17202_cov_43.235 . gene 6229 8561 . + . ID=g10707;Name=g10707.t1 NODE_833_length_17202_cov_43.235 . mRNA 6229 8561 . + . ID=g10707.t1;Parent=g10707;Name=g10707.t1 NODE_833_length_17202_cov_43.235 . five_prime_UTR 6229 6505 . + . ID=g10707.t1.utr5p1;Parent=g10707.t1 NODE_833_length_17202_cov_43.235 . exon 6229 6535 . + . ID=g10707.t1.exon1;Parent=g10707.t1 NODE_833_length_17202_cov_43.235 . CDS 6506 6535 . + 0 ID=cds.g10707.t1;Parent=g10707.t1 NODE_833_length_17202_cov_43.235 . exon 6673 8561 . + . ID=g10707.t1.exon2;Parent=g10707.t1 NODE_833_length_17202_cov_43.235 . CDS 6673 8268 . + 0 ID=cds.g10707.t1;Parent=g10707.t1 NODE_833_length_17202_cov_43.235 . three_prime_UTR 8269 8561 . + . ID=g10707.t1.utr3p1;Parent=g10707.t1 #PROT g10707.t1 g10707 MAAAVISLAMTTPNGFLGTGSERSLTYDDDTEEDGRDPFMEYPIWPDGDLRLTWAEGCCPQFGNSNWAFQRQNRVVRSSNGSIALRKVCLGAIECTGEGCTVAIKPGLRKTTLLRRLLTRCRACGGRMVYKSCDAAVVFETYPPGACDGYPGGKLVMRHYGHHAHSRPTAKDHRLVDGDNDADSDAHTPPETTSPPEDKNAPLSRKKSSYVSPTGPIAVRPGGGTRKSTPSPRGRPSQGSDTKPRDIASTASSDVASLSQFSLPAPAQTIQETMPADTKNVGQLWEPIKMLASACAYVAVVQAEVTEGNLRAPGEAGGPTASQQAGEIIAQLRMGSAGIKRRTNDSESSDISSANTTASSDAQPTPKRGRGRPRTEGHTQGSARSPASPVSVATIQSSPTSVAQSVSIRSASTAMQEARTVGDDGTTTTTTTTRKRGRPKASVPRARTRCKTTPTPVSGVPPTGFTFTPSASVVSWNPSSIGGVGASSTSAGILFHNGVVMYGMPVPHVVSVHPHVPRVGHHHGGVVKEAQGEIGRVDPQM* # ORIGINAL: g11573.t1 original gene structure, not modified by PASA NODE_2127_length_7587_cov_39.9879 AUGUSTUS gene 6070 7422 . + . ID=g11573;Name=g11573.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS mRNA 6070 7422 . + . ID=g11573.t1;Parent=g11573;Name=g11573.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS exon 6070 7422 . + . ID=g11573.t1.exon1;Parent=g11573.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS CDS 6070 7422 . + 0 ID=cds.g11573.t1;Parent=g11573.t1 #PROT g11573.t1 g11573 MPSVAKVAQDAAWVAVGAASAVVVAALAQRAKEALLRSLGIENEDHMTEEDARGRLGGSISLESLATLAQAEAVSLRKSSTHVLLDKAMRPSHVAGLIAACDCSGLSLDADSEDENSGFSDLLPRLKAASAIAMLAKVPEYQERLIAAGALGALMQCLCVAASRQANAAGLRVVRPTSVGDAKQGASGDDFFGDLPAEWEVRFASTGMPYYVDHRLKTTTWKKPGTHADPMESQSGEQQQQQTSPPAYVSAGGALPSEWSLRFNNLSHPVYVNERSRTTTRIRPTAEVMRGYALWQRQRQAVPATATHVTGKGKQNILPRTNRSSGSWILNRIERVVLVALHDFVLTSAVAKRRIVEAGAPEALQAILAASNNAEVVLWAARVVYQLCGSDDLRAKMAGAGLVTQIGRQLRTSFSAISLQKTCLHCLVLLSSGDLEDAVAALRWAAWACF* # ORIGINAL: g11572.t1 original gene structure, not modified by PASA NODE_2127_length_7587_cov_39.9879 AUGUSTUS gene 3450 4316 . - . ID=g11572;Name=g11572.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS mRNA 3450 4316 . - . ID=g11572.t1;Parent=g11572;Name=g11572.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS exon 3450 4316 . - . ID=g11572.t1.exon1;Parent=g11572.t1 NODE_2127_length_7587_cov_39.9879 AUGUSTUS CDS 3450 4316 . - 0 ID=cds.g11572.t1;Parent=g11572.t1 #PROT g11572.t1 g11572 MQISVRTLRGSTITIDVEGSDSIENVRAKIQDKEGIPPDQQTLYFKGIILQDGRTLGDYNVQDGNLISLTPPASSSASASVTTTTPAASASVSATTPAESAATATASSQGNGASSSAAASRTQPAMNTRGYAFLSGITVSTFQNNASLSLEFKSAVATAFAYSVSDVTITRVFDDSIYPNVIVIEFYILGSSDAESESKTLSTVQSLDSTALIARGSGLRRRQLTLSNLTLLGVRGVATIDLSDPTDNKRTVAIAVGVSVGGLFALSLLGTYVFMRCKGSNKVASASA* # PASA_UPDATE: g11571.t1, single gene model update, valid-1, status:[pasa:asmbl_3580,status:12], valid-1 NODE_2127_length_7587_cov_39.9879 . gene 233 3014 . - . ID=g11571;Name=g11571.t1 NODE_2127_length_7587_cov_39.9879 . mRNA 233 3014 . - . ID=g11571.t1;Parent=g11571;Name=g11571.t1 NODE_2127_length_7587_cov_39.9879 . five_prime_UTR 2829 3014 . - . ID=g11571.t1.utr5p1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 2720 3014 . - . ID=g11571.t1.exon1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 2720 2828 . - 0 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 2378 2467 . - . ID=g11571.t1.exon2;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 2378 2467 . - 2 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 2059 2153 . - . ID=g11571.t1.exon3;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 2059 2153 . - 2 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 1488 1568 . - . ID=g11571.t1.exon4;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 1488 1568 . - 0 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 1251 1346 . - . ID=g11571.t1.exon5;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 1251 1346 . - 0 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 961 1131 . - . ID=g11571.t1.exon6;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 961 1131 . - 0 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 672 743 . - . ID=g11571.t1.exon7;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 672 743 . - 0 ID=cds.g11571.t1;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . exon 233 359 . - . ID=g11571.t1.exon8;Parent=g11571.t1 NODE_2127_length_7587_cov_39.9879 . CDS 233 359 . - 0 ID=cds.g11571.t1;Parent=g11571.t1;3_prime_partial=true #PROT g11571.t1 g11571 MAECIAFWPTEKVAAKMQNVSGEKFVAMLSAYLKENGDQVLLGAVRLTLTDRWLEYLNGRFPQCEADDFTPGLFVPAVADQENVAFLFEFMQMLESVKIIHDKKARAVTASIVDITRFRGLKGIEFADIPVGNIVGLSSLCNRIESIVFCGSLSSLKELFGKCGADGVASERLPITTTADTPDGPPVASGGVLWSSLTRAFCSGCGLASTDDAFRFVPYLKSLDVSHNKLATISPDFRLLMHMERLDLSFNSLSSVVGINAMLGKVTWLSLKGNTLTSVM # ORIGINAL: g3088.t1 original gene structure, not modified by PASA NODE_17772_length_214_cov_239.101_potentialcontaminant AUGUSTUS gene 2 214 . + . ID=g3088;Name=g3088.t1 NODE_17772_length_214_cov_239.101_potentialcontaminant AUGUSTUS mRNA 2 214 . + . ID=g3088.t1;Parent=g3088;Name=g3088.t1 NODE_17772_length_214_cov_239.101_potentialcontaminant AUGUSTUS exon 2 214 . + . ID=g3088.t1.exon1;Parent=g3088.t1 NODE_17772_length_214_cov_239.101_potentialcontaminant AUGUSTUS CDS 2 214 . + 1 ID=cds.g3088.t1;Parent=g3088.t1 #PROT g3088.t1 g3088 SVGSLSFGSGDWSVEQTVTLTAGADEGTSEIVATATSLALGDAGEVAGQTFIVEVVQSPVVLIGSGGVRL # PASA_UPDATE: g5056.t1, single gene model update, valid-1, status:[pasa:asmbl_1160,status:12], valid-1 NODE_1308_length_12266_cov_41.0484 . gene 9496 11973 . - . ID=g5056;Name=g5056.t1 NODE_1308_length_12266_cov_41.0484 . mRNA 9496 11973 . - . ID=g5056.t1;Parent=g5056;Name=g5056.t1 NODE_1308_length_12266_cov_41.0484 . five_prime_UTR 11973 11973 . - . ID=g5056.t1.utr5p1;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . exon 11751 11973 . - . ID=g5056.t1.exon1;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . CDS 11751 11972 . - 0 ID=cds.g5056.t1;Parent=g5056.t1;5_prime_partial=true NODE_1308_length_12266_cov_41.0484 . exon 11124 11352 . - . ID=g5056.t1.exon2;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . CDS 11124 11352 . - 0 ID=cds.g5056.t1;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . exon 10424 10823 . - . ID=g5056.t1.exon3;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . CDS 10424 10823 . - 2 ID=cds.g5056.t1;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . exon 9496 9950 . - . ID=g5056.t1.exon4;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . CDS 9542 9950 . - 1 ID=cds.g5056.t1;Parent=g5056.t1 NODE_1308_length_12266_cov_41.0484 . three_prime_UTR 9496 9541 . - . ID=g5056.t1.utr3p1;Parent=g5056.t1 #PROT g5056.t1 g5056 AALERLEAKNKPAGQKTLRSNSNPGSQPGATVDARGKSPDVKPSVAATGTAASAQRDVPVARTEARSGSPANDENPLVVDYGVASVLSPRDSLHLCFASIRNGSNAATARLCEDTIALYLTNVVAHPGELKYRRIRMGNRQFGERVASVPGGIDFLVASGFSIRIDKATDGSDDKFLVLPESDSTPSSQDVGGSSDAHSDIITNSKNNTNTTAEEGSFGVSEADVLVGLALQLLQTAHPTPFVPERRARVLTVPANASVAIVRTFAVPSSFYDLTVDDARRELRKRKETAEKELTLRTASMRENDAAPRNPRNYRFALVRVRFPDGLVLEGAFHADERFSAVRLFVSSCLSESHKSRAFALSLPGCTKPHDDDGVSLRKLGVVPAALVNLFWRDCDAASPSSEPALVSALLEGARSIAE* # ORIGINAL: g5052.t1 original gene structure, not modified by PASA NODE_1308_length_12266_cov_41.0484 AUGUSTUS gene 2909 3607 . + . ID=g5052;Name=g5052.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS mRNA 2909 3607 . + . ID=g5052.t1;Parent=g5052;Name=g5052.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 2909 3607 . + . ID=g5052.t1.exon1;Parent=g5052.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 2909 3607 . + 0 ID=cds.g5052.t1;Parent=g5052.t1 #PROT g5052.t1 g5052 MGSRFLSPVTCAVLLALVVVATAADASYIIQVWYNTELSETCQLTVKPGVIYENVPLDKCTLASGIVTAFSYIFMTASESLPNGFTLTQYNTRTDCEDENRGFEVGDVALNTCSLFKDDTAFVKVTVVGATPAPACTPATVTVTTQVAAPTVTVSKQVTGPTVTVTVTPQVSTPTVTVTVTQNAPTGPTPITVTVTSYGLPAATAASAFPVPTYCDKDLGLETSFQIGERNH* # ORIGINAL: g5051.t1 original gene structure, not modified by PASA NODE_1308_length_12266_cov_41.0484 AUGUSTUS gene 117 1913 . + . ID=g5051;Name=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS mRNA 117 1913 . + . ID=g5051.t1;Parent=g5051;Name=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 117 206 . + . ID=g5051.t1.exon1;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 117 206 . + 0 ID=cds.g5051.t1;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 495 616 . + . ID=g5051.t1.exon2;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 495 616 . + 0 ID=cds.g5051.t1;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 810 918 . + . ID=g5051.t1.exon3;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 810 918 . + 1 ID=cds.g5051.t1;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 1167 1913 . + . ID=g5051.t1.exon4;Parent=g5051.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 1167 1913 . + 0 ID=cds.g5051.t1;Parent=g5051.t1 #PROT g5051.t1 g5051 SENMSAFTLDAVRKIIPPLTATHYKGMAGKVAVFGGSREYTGAPYFAAISALKVGADLSHVLCSVDASPAIKAYSPELIVHPLDICVHARHSTDHVPQVIVDAVVTQIKSLFGRINVLVVGPGLGRDPVALACARQAIHAARSVRLPLIIDADGLFVVTEDPDLIKDYALATLTPNANEFKRLYEKVMGIPLQPADASHGRSGGECDVNGAAVKETAELSRALGAVTIVRKGMHDVIASCDGSNRFVAVVDRPGSARRCGGQGDVLAGTLATFTGWTRASAAERVKGGSNSVNLRGSDATGVDKTRSGNVLAAVGACHLVRECSSLAFQRHGRSMVAGDLLGEINHAFVRLYPEC* # ORIGINAL: g5053.t1 original gene structure, not modified by PASA NODE_1308_length_12266_cov_41.0484 AUGUSTUS gene 4363 4701 . + . ID=g5053;Name=g5053.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS mRNA 4363 4701 . + . ID=g5053.t1;Parent=g5053;Name=g5053.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 4363 4701 . + . ID=g5053.t1.exon1;Parent=g5053.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 4363 4701 . + 0 ID=cds.g5053.t1;Parent=g5053.t1 #PROT g5053.t1 g5053 MVSTGSDAEAGTGGPVNCTVLGPNGDNSGPIEIARSLRPGTTWRFQRKGFKLARITGLMLTPTRDTDPWRCTTVQITQTGLLPVTFECPSELIYSSGVVIAANENQGLPDSR* # ORIGINAL: g5054.t1 original gene structure, not modified by PASA NODE_1308_length_12266_cov_41.0484 AUGUSTUS gene 5274 7225 . + . ID=g5054;Name=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS mRNA 5274 7225 . + . ID=g5054.t1;Parent=g5054;Name=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 5274 5829 . + . ID=g5054.t1.exon1;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 5274 5829 . + 0 ID=cds.g5054.t1;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 6105 6179 . + . ID=g5054.t1.exon2;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 6105 6179 . + 2 ID=cds.g5054.t1;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 6381 6560 . + . ID=g5054.t1.exon3;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 6381 6560 . + 2 ID=cds.g5054.t1;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS exon 6897 7225 . + . ID=g5054.t1.exon4;Parent=g5054.t1 NODE_1308_length_12266_cov_41.0484 AUGUSTUS CDS 6897 7225 . + 2 ID=cds.g5054.t1;Parent=g5054.t1 #PROT g5054.t1 g5054 MAFFRFICALTCVLFALAGRASTASPEPADLYKVQVWYHAEQYTTSTPEQCPSTKPKPAITYDSVALDECTLMTGSQTGFPYILVTLSGADVPNTLSLTQFDSLSDCENNIRGFDFGIVALDTCTLFNDGSANVKVTVAPPPLCTPTTVTVTVTSYVSAPTPTPAFPVTGVYCDKDFGLENSFQIVLSNVARKVRLRRANGNIAECNCPEDLDSADCAVSAWSSWSLPCSKSCGGGKVTRTRTVITTPTGAGMECPALEEERVCNDSPCPVTTFTIMVSTASDAEAGTAGPINCTVLGPRDDNSGPIEIARSLRSGTTWRFQRKGFKLARITGLVLTPTRDTDPWRCTTVQITQPGLLPVTFECPSELIDSNGVTLSID* # PASA_UPDATE: g5055.t1, single gene model update, valid-1, status:[pasa:asmbl_1161,status:12], valid-1 NODE_1308_length_12266_cov_41.0484 . gene 8222 9418 . + . ID=g5055;Name=g5055.t1 NODE_1308_length_12266_cov_41.0484 . mRNA 8222 9418 . + . ID=g5055.t1;Parent=g5055;Name=g5055.t1 NODE_1308_length_12266_cov_41.0484 . exon 8222 9418 . + . ID=g5055.t1.exon1;Parent=g5055.t1 NODE_1308_length_12266_cov_41.0484 . CDS 8222 9298 . + 0 ID=cds.g5055.t1;Parent=g5055.t1 NODE_1308_length_12266_cov_41.0484 . three_prime_UTR 9299 9418 . + . ID=g5055.t1.utr3p1;Parent=g5055.t1 #PROT g5055.t1 g5055 MNDTEFSGRGYLGGRRPSRLKTLNTGHSNKNVTTANSVDVDSDAVAILRVTASHAASSVQITPEPDCSDYQWATQRAPSSLSTTPSQVTLANIPVEIVAIHIVPHLNENDVRSLSHVTVALRETLRCMATYRMRPHFGRIFCADTTFRKLVLSTIPRHRIILQLENTRLSDAAPIEGLHEVHVTNCDVDRICGVVSNVHIVSLTYCRVGSLSAFANIHTIDLTGSIGLGDLHALRNAHTVRLANCTPIENVSALGGVHTLDLSLTAITSAQLEGLGGVHTLNLHCCQGVRSVDALYNVHTLNLSRCRSLTSVAGLGGIHSLNLEECWGVMQLSVVDDVCEVVLPNGVRRVAPCRHRDV* # ORIGINAL: g12212.t1 original gene structure, not modified by PASA NODE_3563_length_3195_cov_40.1686 AUGUSTUS gene 473 2946 . - . ID=g12212;Name=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS mRNA 473 2946 . - . ID=g12212.t1;Parent=g12212;Name=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS exon 1410 2946 . - . ID=g12212.t1.exon1;Parent=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS CDS 1410 2946 . - 0 ID=cds.g12212.t1;Parent=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS exon 847 1060 . - . ID=g12212.t1.exon2;Parent=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS CDS 847 1060 . - 2 ID=cds.g12212.t1;Parent=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS exon 473 627 . - . ID=g12212.t1.exon3;Parent=g12212.t1 NODE_3563_length_3195_cov_40.1686 AUGUSTUS CDS 473 627 . - 1 ID=cds.g12212.t1;Parent=g12212.t1 #PROT g12212.t1 g12212 MSNKWINSTTAAALFQSALASHAVQTALAEGIVSPLRAEIAGLRSELTESLKEMLAVEMDKLHTLHPPVATEAVEAPQATPATLSRDENTASDVARTSPSDDARITALLEAMEARLAAMESKIDAGIAMTNSLSASLANPVSRAGASAADSMQGSATAPYATELSEGGQVLELSAKDASSCDVSESVTLATNTPPDVASMATWSVESVQAWAASLAIPRSQRDILRNELIDGAYLVLHATDTRLAQLGVKAGPRAKILAGVKEAVGVDWDASRDGIIVAIDRDVGAGGVNADGVVVAVGADSRGKEMELKLTEERREVDESEEKDVDRERERKEKEEREKKEREEREKKGREENGTKERMEKEREARDMNANNEEEDKGEGAVAERKRSAQFVGGLIDADNENVETATAAVVASGVGEMDGKGGKHVRPRAVTRTRSLRSRAIDGAGWETRDRMATGEPWTLPGYPRLSHNNPFMYVMELLYHKGTPSERKALTSTNADNAKSVLFSVISSRGNGRVLSEFGWQFVVSARTNERSAYKNNDFFLVEDEPSQSSMDMTMDVSVGGDHYVIGFANNVRDYATDTASYKNRETAVLVDRDIRGFVILFAVCLSQSFTAVYELHRMIGQGCDRDKFPLI # ORIGINAL: g2996.t1 original gene structure, not modified by PASA NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS gene 1 382 . - . ID=g2996;Name=g2996.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS mRNA 1 382 . - . ID=g2996.t1;Parent=g2996;Name=g2996.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS exon 1 382 . - . ID=g2996.t1.exon1;Parent=g2996.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS CDS 1 382 . - 0 ID=cds.g2996.t1;Parent=g2996.t1 #PROT g2996.t1 g2996 MVIATFCSATGTATVALAMEQLSAMNSKHTYSMMLAFLLTHEVDAAFRHEWRMLPLTSFLPEDVGREVFIWLHVPLYAGILSFGDRMAFRTGLAAFSVVHVGLHWLYRTHPANEFNNPSSWALILGA # ORIGINAL: g2997.t1 original gene structure, not modified by PASA NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS gene 1015 1567 . - . ID=g2997;Name=g2997.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS mRNA 1015 1567 . - . ID=g2997.t1;Parent=g2997;Name=g2997.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS exon 1391 1567 . - . ID=g2997.t1.exon1;Parent=g2997.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS CDS 1391 1567 . - 0 ID=cds.g2997.t1;Parent=g2997.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS exon 1015 1167 . - . ID=g2997.t1.exon2;Parent=g2997.t1 NODE_4434_length_1623_cov_28.0652_potentialcontaminant AUGUSTUS CDS 1015 1167 . - 0 ID=cds.g2997.t1;Parent=g2997.t1 #PROT g2997.t1 g2997 MILIGMDDEKGPAVFKCDPAGYFIGCKAAAAGVKSQEAVNHLEKKFKKTPSWNYKETVENAIVSLSSILSIDFKPSEIEIGVVSKENPRFRQLSEAEVEQFLNVIAEKD* # ORIGINAL: g5699.t1 original gene structure, not modified by PASA NODE_85_length_42271_cov_47.7555 AUGUSTUS gene 35839 41288 . + . ID=g5699;Name=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS mRNA 35839 41288 . + . ID=g5699.t1;Parent=g5699;Name=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 35839 36479 . + . ID=g5699.t1.exon1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 35839 36479 . + 0 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 36638 36730 . + . ID=g5699.t1.exon2;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 36638 36730 . + 1 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 36908 36996 . + . ID=g5699.t1.exon3;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 36908 36996 . + 1 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 37178 37396 . + . ID=g5699.t1.exon4;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 37178 37396 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 37559 37777 . + . ID=g5699.t1.exon5;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 37559 37777 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 37955 38194 . + . ID=g5699.t1.exon6;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 37955 38194 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 38418 38524 . + . ID=g5699.t1.exon7;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 38418 38524 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 38716 38878 . + . ID=g5699.t1.exon8;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 38716 38878 . + 0 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 38993 39079 . + . ID=g5699.t1.exon9;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 38993 39079 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 39198 39448 . + . ID=g5699.t1.exon10;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 39198 39448 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 39582 39862 . + . ID=g5699.t1.exon11;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 39582 39862 . + 0 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 40061 40104 . + . ID=g5699.t1.exon12;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 40061 40104 . + 1 ID=cds.g5699.t1;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 40426 41288 . + . ID=g5699.t1.exon13;Parent=g5699.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 40426 41288 . + 2 ID=cds.g5699.t1;Parent=g5699.t1 #PROT g5699.t1 g5699 MPETKEVKKAKGDRTKPKKARNLIPKQDVQADVVSMGGGTLTSKPPLYSHDGKYFFCACSRYVKVFSVASGECVRTLVGHTDDVTFLAHNPSNALQLISCSLDGTIRVWDYNDSVQLRHHDLQIPLHYVALHPALPPNTALVVSTVTNLKKGVLKNASRVYIYRLKPGKGTKKTTLFKGGECVAAAISPDGLRFAMVAKKKLYLCDIKAATVEKFGHTHKLLALAFHPKEPCIATGDATGKVTLWYCIGGERPAVTTTMHWHSHAVASIAYSGDGAYLLSGGHESVLVIWQLATDNKQFLPRLGGPIRHICISADEEHFLLAHGDNAIRIVSSASLEIEHVIKGFRRAEGVSDRLPPTGLVVQPNTGLIVTNGLPGTLQFYDPRADRHVTEAEIIPRNYVSRRNNAPINYAHVERAAFSADGAWMATIERREAGILSEESRMKFWRVSPDSSTRAPYTLTTCCDAPHSKRVEALVFHPRVHMAVTCGLDRRFKIWEKTSDSSSSWFCRSVGFYQGLPAHAAAFSEDGSLVAVAFGSTVTLWDPVSNSLQGVLSYPPSNEKVSFVAFIAASPFLVASTETTVYVWNILTCSVWWSYRMNATSIAVDPSSPRFAAFVKDDQTGDYRAVLFEAATPTPISILPLAGHWVWSAVFVPPRRADGNGEHADSLVCFFNDRFEVGTFDAAALALRADAAAFPADRAPLQAMARLSTVDADEEESRAVFAQVFGGASSQTAKGQRASAQAVEKSDVAVSAVGFEPAPVGDQRLSRTIFNAPSHVIPPASQLFTSFMDLLLVKAAPVSENGTAKTPVHAADDNRMEVDTPSTASAAALNVPTHGGHKTHPHDDVDSNINLAVYDDFVDFFKAELNISRGSAAAAAAPAKGSLPRQKQAKQAPSNGSQSHSQESTPASDNKDAQAQEKDVRGAQGVRFANATPAQTPTQKNGPARKTPARKRKAEEDESDASETSHVDEDGSALPLPKKKAHQRTPSNKQGRAAEIDDSDADAEAPKHGKSASSTPTAATTNGHSVQKSLRKRVLADSDADTDVHVTPMRTPNARKGGATDTPLTQSAKTKSKSPATDPSPELIKALRNRIVKTPKKK* # PASA_UPDATE: g5697.t1, single gene model update, valid-1, status:[pasa:asmbl_9710,status:3], valid-1 NODE_85_length_42271_cov_47.7555 . gene 20303 27422 . - . ID=g5697;Name=g5697.t1 NODE_85_length_42271_cov_47.7555 . mRNA 20303 27422 . - . ID=g5697.t1;Parent=g5697;Name=g5697.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 27311 27422 . - . ID=g5697.t1.utr5p1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 27145 27171 . - . ID=g5697.t1.utr5p2;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 27311 27422 . - . ID=g5697.t1.exon1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 26794 27171 . - . ID=g5697.t1.exon2;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 26794 27144 . - 0 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 26494 26650 . - . ID=g5697.t1.exon3;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 26494 26650 . - 0 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 25223 26271 . - . ID=g5697.t1.exon4;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 25223 26271 . - 2 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 21315 25076 . - . ID=g5697.t1.exon5;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 21315 25076 . - 0 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 20871 21176 . - . ID=g5697.t1.exon6;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 20871 21176 . - 0 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . exon 20303 20745 . - . ID=g5697.t1.exon7;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . CDS 20587 20745 . - 0 ID=cds.g5697.t1;Parent=g5697.t1 NODE_85_length_42271_cov_47.7555 . three_prime_UTR 20303 20586 . - . ID=g5697.t1.utr3p1;Parent=g5697.t1 #PROT g5697.t1 g5697 MSKGASKEEDALQYLAVNRSTLVGDASEQAEWGSKKWVWVPDAEEGFVSATIKGNEHSDNVEVELTSGKITTVKRDDLQKCNPPKFDKVEDMAELSHLNEASVLHNLRSRYYSNLIYTYSGLFCVVVNPYKRLPIYSDKVIEMYKGRRRQETPPHIYALTDMAYRDMLSDKENQSILCTGESGAGKTENTKKVIQYLAGIATGNSKAQGELEQQLLRANPILEAFGNAKTVKNDNSSRFGKFIRIEFDRSGFISGGNIETYLLEKSRSIRQSAEERNFHIFFQLLRGASSDIRKELLLEDVNGYKFLSGEKTVDNVDDAKEFKDTVDAMKIVSITDEDQKSVWRILSGLLHMGNIEITQDKRSDQAMMPNTTVAQKVCHLFGIPINDFQKSLLTPRVKAGRDLVTKTQNKEQVEFAIEALAKAMYERLFKWIVAKINKVLDTKNRGQTFIGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHHMFVLEQEEYKKENIEWTFIDFGLDLQPCIDLIDKPLGVLSLLDEECIMPKASDKTFVEKLDKNHDKKHPKYKKPHFKSGNDFTVQHYAGEVEYNAAQWLTKNMDPLNDNVTALFEASSETLVKELWDGYVAPSVGADASAFGATRQRKGMFRTVAQIHKEQLDNLMTTLHNTSPHFVRCIIPNHQKKAGKISAHLVLDQLRCNGVLEGIRICRQGFPNRIPFMEFKQRYEILTPGAVPKGFMDGRKAVQKIVEALELDANEYRLGSSKVFFRAGVLAHLEEQRDIKLTKIVKEFQAYCRGYIARQQFKKMMSNETAIRIIQRNVKRYLVLRSWAWWKLFTKVKPLLAVARQEDEMRLREEEIKKVQERADREEAARIELEKNVSKLLDEKKQLSEQLQVEKEACDEAEEVSKRLAAKKTELEAALTDLEGRLAEEEDNGIKITAEKKKLEAQIEDLDAKVEELDLIRQKLEQDKAAREAQLKKTEDQLAVETDTNQRLTKEKKTLEDRIGELTTSLQDEEDKSKHLSKLKTKLETTVSELEERVAKEEAIRQENEKQRRKLETDVRDLRDQIAALQKENEELKAQLEKKQAELDAVSKQLEAETAAKAAIDKAKRDISVHAEELQEDLEAERIAKAKVEKARKDLADELEALRAQLDDSADATAAQKELRAKREQEINDLNKRLADEAAARDEALTQLRKKHQSAVEEAAQKQEAAQKQIAALDKAKHTLEGEKADLSGEVEQLKKQAAEVDKKRKTLEAQLNDANTRIKDEERKRGELELSNGKLSAELETVSKRLDQTESQGGVAEKAKKNLEEQLDAVKAQLDEENRAKLSLASKLKQEQGEVERLHEQIEEEAAKRAAAEKQLSALNAQVAESKRKADADAAALEDAESARRKVVKELEEERAANEDLQRDRTSFEKTKQRLQSELDDLNLQIEKERTTRGNLEKKQRKFDQTLAEEKQRADDALRERDDAQKEAREGQTKAINLQKTVDEYEQRISEVERSRKQLQAELQSLIENKDDAGKSKHELEKAKRALEQLVQEQKTQLEELEDELQGTEDAKLRLEVNIQALKAQMDREASAREEASEEGRKSLVNRLREIEEELEEERKARSTLAGQKKKLELDLAESDGRVDDANKLKEEAVKQLKKAQATAKDAQREAEDARAAREELSAQVKDLEKKASSATSELDQARAALEQAERARKAAELERDELQEEAAGAQSLQQTLADAKRRAENELARVQEELEEEMANAESLIEKARKNQVLVEQLQLELASERDAFQKADAAKAVFERQNKEFKSKLEELESSLKGKGKAAAAQLEAKVRELESQLEEEARAKQEAQRIKQKQDRRIRELQAQVEEEHKQAEAFKDEATKGGAKLKSLKRQVEEAEEESQRANAGKRKVQRELEEQTELVEALQREVSSLKSKAKRATTSSSKDDAE* # PASA_UPDATE: g5693.t1, single gene model update, valid-1, status:[pasa:asmbl_9706,status:12], valid-1 NODE_85_length_42271_cov_47.7555 . gene 1 3401 . - . ID=g5693;Name=g5693.t1 NODE_85_length_42271_cov_47.7555 . mRNA 1 3401 . - . ID=g5693.t1;Parent=g5693;Name=g5693.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 3369 3401 . - . ID=g5693.t1.utr5p1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 3022 3401 . - . ID=g5693.t1.exon1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 3022 3368 . - 0 ID=cds.g5693.t1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 2503 2876 . - . ID=g5693.t1.exon2;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 2503 2876 . - 1 ID=cds.g5693.t1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 2302 2390 . - . ID=g5693.t1.exon3;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 2302 2390 . - 2 ID=cds.g5693.t1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 2076 2181 . - . ID=g5693.t1.exon4;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 2076 2181 . - 0 ID=cds.g5693.t1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 1664 1963 . - . ID=g5693.t1.exon5;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 1664 1963 . - 2 ID=cds.g5693.t1;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . exon 1 1545 . - . ID=g5693.t1.exon6;Parent=g5693.t1 NODE_85_length_42271_cov_47.7555 . CDS 1 1545 . - 2 ID=cds.g5693.t1;Parent=g5693.t1;3_prime_partial=true #PROT g5693.t1 g5693 MRVTSWGNLPVVVLQSVKPCDLLKSLFEHRPAWSTAGNMERARTLSLLLKAAVALLVLAAFAQAQCETNEIYVDVIFRDHHSGLPSSPTLRHPDFERSSYTTSTRNVVEQRLDADNKPVAVNIWNLAERSRCFISPDTFYSWYHDGPFRGGYESRRVDKTMKWVRITAGSDKFKSAATTSSDGSGFYPLNGLGYGDYASNGNNYGFTTELAIKFQYKGFESFKFTGDDDFWAFIDGYLVVDMGGLHSPESATISLPPDVPVVSNVGITQNLILRVGREYTLRIFNAERHSTGSTFYAETTLRFTPTIKIETENSDGSFLLKKQQPRTITITLSHQPDQDTDITCRAADGSATFAPLRFTKCTTVRSTTMAVTFVSVNFLGTTVTCTGSSTGIYNNILSNAVSMRSISLALPTFTTLPSNVAVPCTGIPAFQDLTATDDCRSTSVVTKTETKTPGACVGRYSLARKWVATDSCGNTASYTQTITVTDNVAPTFQTTVAPVAVPCGTTIPLPSTIQAVDNCGGTVTIAPTVETIGAGACPRNYTINRSVTATDDCGNSAVYNYFHTTYDVTVPRFPSPPTADITVTCIGVPTASSIQAQESCAGSFFTVNPTDTRLNGSCPNSYTLTRRWRAVAQCGGVATTDQRISVQDRDAPVLQNVPASVSIKCSDPVPIAQVTAIDACPGTVAVTFQETRTNSCANAYTLTRTWFAKDVCGNQSPTSTQQVQVTDNVAPVLNNVPADVSVACSAVPPVPTNITARDDCDGAPSVALAETTIAGACANRYTIQRTWTARDACGNPTSVTQRIIVTDNVAPTLVGVPANVTVTCSTVPTAPTVTATDNCGSATVTYTQTRTNGRCANAYTLLRTWSATDACGQTTTGVQKITVNDTTAPVFSSPPPTTLTAECNSIPAVPSLQATDDCNA # ORIGINAL: g5698.t1 original gene structure, not modified by PASA NODE_85_length_42271_cov_47.7555 AUGUSTUS gene 28403 35427 . + . ID=g5698;Name=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS mRNA 28403 35427 . + . ID=g5698.t1;Parent=g5698;Name=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 28403 28413 . + . ID=g5698.t1.exon1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 28403 28413 . + 0 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 28544 28667 . + . ID=g5698.t1.exon2;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 28544 28667 . + 1 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 28806 28917 . + . ID=g5698.t1.exon3;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 28806 28917 . + 0 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 29041 29227 . + . ID=g5698.t1.exon4;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 29041 29227 . + 2 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 29487 29994 . + . ID=g5698.t1.exon5;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 29487 29994 . + 1 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 30264 34819 . + . ID=g5698.t1.exon6;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 30264 34819 . + 0 ID=cds.g5698.t1;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 35136 35427 . + . ID=g5698.t1.exon7;Parent=g5698.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 35136 35427 . + 1 ID=cds.g5698.t1;Parent=g5698.t1 #PROT g5698.t1 g5698 MTTRLDRLFLLLDTGSSPSVRKAAAQQIGEVQKLYPHELNGLLGRAFPLLTNKKWDTRVATADAVGAILKNVPQYVCEYRKAEPMDVDGGHDRAPVTAEDCAAAAGKLSLATFDLVGVINGGKPLMASDGKEFEYVWQGADTKDRIAWQRKNMSLRLGMDSVQTEGSNPVFDDFFRTLFTDNDLAEPTAEEIARKRKREEEEEKKLKELDQLVAVNGLSARERNRLKRRSKANSRGYGRSTSAMNNSREPADAGADDADSDGMPSAKRAKTGDSGGGAVAVKVEDDNKMVLAASADEWPFESFSAELCHFLFDHVRHGAGLGLREIIRLHGGTAGWSPELPPEQRTRANQLWLEDVAIRLICVFALDRFGDFISDQVTAPVRETCAQTLGAALSHMEPDGVEGIVRALLVLVDQPQWEVRHGGMLGIKYAVAVRQDLADRLLPLVLEPLLTAVGRRPPADAGGLATDGNVIDEDVRAVAAEALLPLMPRMVANDPARIVPVLSMLWDTLLWLDDLTSSTAGVLSLLAELLSDPACVAISVGTSVAQAHTGIGGAGAANATLLPLSLLIPRLWPFFRHPLVSVRRSVLRAFDKILLGAAADALTSPTGSVGSWLKDVLAHALTHLFQNLIIEERDDIVSQTLEVWDRLLAAAEREDLSEAAFASGRLERWLELVSNEPGSPLPRGSIMVAAHHVTTGVQAGPAQRDFFLASVLAASDPHASEQVLGARLTGAVALGRVAVRMTLSARDQLIVEVVPRMFSSTMALRRQMASVFVSAWADASPTGTVPSELIPHAIALVDLDEVPAFAEISIYTRLMQRECCIAISTLATVFVLAPDFAEQQKALVPSFFEDQGDWFVRECVPAWLGQARRHIDSLPQKLHAALSGVLNMAAQARELRERYDIAVGAAAADALLALGVLPEKITALVKRILTSLQKEPSARLQQRTAHALPRLLRLAVAREKSPNDRIVAKVCGLLTGDPNQTPKLDLSIAASRPEGMLTATGSEQSIAVAAEQDAVSAQRRSEGFRLLDGAGVRLHSVAQAATEDERALFRVARRGGEYAVLETARAFGGELFVGVPELWRRSGEVISGVTAVGVAGMGGPVDFASAQSVIDALSLFSTIVGAAHASLVPQMLTLAPSLLACLAYPCAGVRYTAATAVAALSRASVVGSMAWIVDSLLPALADPENLPLRQGASEAIFYVIRSLDVDIVPWISFLALPLLGRMSDPDEDTRRLCTRSFAAIVRLMPLEAGAADPEGMPASLRDARVRQRAFVEQLIDPKTMEDYVMPVKINAELRRYQQEGVNWLRFLDKFRLHGILCDDMGLGKTLQSICILASSHAERAAAFARGEGPEYAPMPSLIVCPATLTAHWYHEIRQFAASLNPMQYTGKPEERRALQASVARHDIIIAAYDTVMRDRDFFAGIGWNYCVLDEGHVIKNPRTKTSQSVRSLRTAHRLILSGTPIQNNVVELWALFDFLMPGFLGAESQFTETYARPILASREARASSKEYEAGALALEALHRQVLPFMMRRMKSDVLDDLPPKIIQDYYCELSPLQQRLYEDFSKSRTRQSIEQEIEGATSEAGSGSAVDADADAAGANARGVVAKASKYGMVAAKKELGQPQEAGKPAAHIFQALVYLRKLCSHPKLVLTPEHPQYARVKAEFPDLSAVDVSSKLLALKELFAECGIGGGGGDTETSGVGEEASSATGMGEVVQHRVLLFCQLKGMLDIIEKDLLRKMKGVSYLRLDGDTPMDKRHSVVVKFNEDPTIDVLLLTTQVGGFGLNLTGADTVIFFEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITKGTLEEKIMGLQRFKLSVANSVVTQDNSSLRSMDTSQLLDLFDVAGDGQAGSAAKADGAQWNSPTAGKKKVGADGVISDLQSILDSSQDSYDQEYNMDSFLKAFAS* # PASA_UPDATE: g5694.t1, single gene model update, valid-1, status:[pasa:asmbl_9711,status:3], valid-1 NODE_85_length_42271_cov_47.7555 . gene 4033 6544 . + . ID=g5694;Name=g5694.t1 NODE_85_length_42271_cov_47.7555 . mRNA 4033 6544 . + . ID=g5694.t1;Parent=g5694;Name=g5694.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 4033 4084 . + . ID=g5694.t1.utr5p1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 4033 4138 . + . ID=g5694.t1.exon1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 4085 4138 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 4383 4430 . + . ID=g5694.t1.exon2;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 4383 4430 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 4638 4881 . + . ID=g5694.t1.exon3;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 4638 4881 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 5087 5199 . + . ID=g5694.t1.exon4;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 5087 5199 . + 2 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 5496 5582 . + . ID=g5694.t1.exon5;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 5496 5582 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 5745 5822 . + . ID=g5694.t1.exon6;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 5745 5822 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . exon 6079 6544 . + . ID=g5694.t1.exon7;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . CDS 6079 6117 . + 0 ID=cds.g5694.t1;Parent=g5694.t1 NODE_85_length_42271_cov_47.7555 . three_prime_UTR 6118 6544 . + . ID=g5694.t1.utr3p1;Parent=g5694.t1 #PROT g5694.t1 g5694 MMLARLSRSAVAAPALAQVRGLATAAAAQAAPLRPPLRAYGVTGRYAEALYTSASKSKALDAVNRDMEAIADLVKKNGKFVGFLKDPTKSRAKKAESINTLLKSVNFNPVTVNFFTVLAQNNRLAWTDSITETFGKIMRSHRKEIGCTVVTAKPLDDAAIKKLESSISGFAAQGQTLIITYKVDPEIVGGVIVNIEEELYIDMSVATKIKKLTQALSASL* # PASA_UPDATE: g5695.t1, single gene model update, valid-1, status:[pasa:asmbl_9707,status:12],[pasa:asmbl_9708,status:12], valid-1 NODE_85_length_42271_cov_47.7555 . gene 6596 17314 . - . ID=g5695;Name=g5695.t1 NODE_85_length_42271_cov_47.7555 . mRNA 6596 17314 . - . ID=g5695.t1;Parent=g5695;Name=g5695.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 16934 17314 . - . ID=g5695.t1.utr5p1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 16831 17314 . - . ID=g5695.t1.exon1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 16831 16933 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 16538 16601 . - . ID=g5695.t1.exon2;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 16538 16601 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 16008 16448 . - . ID=g5695.t1.exon3;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 16008 16448 . - 1 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 14165 15834 . - . ID=g5695.t1.exon4;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 14165 15834 . - 1 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 12991 14031 . - . ID=g5695.t1.exon5;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 12991 14031 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 12664 12873 . - . ID=g5695.t1.exon6;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 12664 12873 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 12286 12537 . - . ID=g5695.t1.exon7;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 12286 12537 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 11844 12161 . - . ID=g5695.t1.exon8;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 11844 12161 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 11541 11732 . - . ID=g5695.t1.exon9;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 11541 11732 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 10589 10758 . - . ID=g5695.t1.exon10;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 10589 10758 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 10221 10397 . - . ID=g5695.t1.exon11;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 10221 10397 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 9707 9907 . - . ID=g5695.t1.exon12;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 9707 9907 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 9339 9506 . - . ID=g5695.t1.exon13;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 9339 9506 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 9004 9201 . - . ID=g5695.t1.exon14;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 9004 9201 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 8727 8778 . - . ID=g5695.t1.exon15;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 8727 8778 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 8417 8557 . - . ID=g5695.t1.exon16;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 8417 8557 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 8105 8194 . - . ID=g5695.t1.exon17;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 8105 8194 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 7732 7829 . - . ID=g5695.t1.exon18;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 7732 7829 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 7452 7527 . - . ID=g5695.t1.exon19;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 7452 7527 . - 0 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . exon 6596 7217 . - . ID=g5695.t1.exon20;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . CDS 7069 7217 . - 2 ID=cds.g5695.t1;Parent=g5695.t1 NODE_85_length_42271_cov_47.7555 . three_prime_UTR 6596 7068 . - . ID=g5695.t1.utr3p1;Parent=g5695.t1 #PROT g5695.t1 g5695 MAYMQQGQWIITPEERARSDSIFLSLKPQGGYLTGLQAREYFMQSKLPVPILGHIWNLADVDKDGRMTADEFAIAMHLLQAKIRGVDPPSTLPPSLISRSSAATAVPLAGIVPMVVQTGGIPMTVPVAIGALPTAVPAAGVQPTAVGAAAPGEDWIVSHAERLKYNQMFNQLDQRRAGLLTGLQAKAVLVNSGLPQGLLAQIWSLSDIDKDGSLTSEEFALAMHLINRAKSGVAIPAVLNDEMLPPSVRKQKAQQHIQNSPKPEASSAPDIEDRLRENFKLGQAELERRRREAEDMERKHREEVERKQREEEERKRELDRLRREQEERERQRQLEAEVARQRERERILEDEKRREEDRRRRDELVSWARRARTALEDLKEREIEGRRRAQLSSERLREELSALRLRRGPLQAELDELAVRLRDERVQASRAQEELNVRTMALDEVKFECDETRALLIGLVDQKRSLQRQIEMIQEALAGNNNTQRMQSLLQGVRDSVERLKLEVRTMEADVTIKKAEHASLMTQGQTLRTELITATRLVDQLTDRKRVLLEAEIGRAREEHMRNLKERRAREDADKRERDERERREREERIKRDREERERQDRQDKERREKEEKEQQQRREKEKEMQERREKELREQKEREEREARERKAREEAAAAAAAATVATAAAVTVASTPKKAPPPPSKPSAASTPAPTIAAVVAPPTPAKPTPAVVAPPTPAKPTPAVVVAPPTPAKPPTVSVPVSNAAPPTPAKVVPALPPKELKPKVAFVPEVSVVDTDVHEYNGVSDEPESPQHAAAKPEEAPAQSHYNAAPADVYYSALYDYTAVNADELSFEAGALIRFVATVDNDWLEGELDGVVGLFPATYAVQQEPSHSATNGSFAAGAVLSESDMLAKLEEENQRIEDEKRKAETLIRLDAENRRLEEAQKKKEEARRRLEEEDKKKKVDEDKKKKDEDDRKKKAAALEEEKKRKVDEERKKKEEEEKKKKEEEEKRKKAVEDERKRKEEEEKKRKLEEEEKKKKAIEDERKRKEEEEKKKKTVEEERRRKEEEERNRKKAQVAAIMARSTSAGVISTASAPILGGASTHTNLSGTSSTNSLPAATAVADDQYVALYTYAAANDDEVSFSAGDAVVVVEKGTDGWWKGTVGGATGYFPANYVQEAPQPEPPKPTVVIEAGEYMVAQHAYSGGQDGDLTFNSGDSVRVLQRNDNGWWEGECNGMRGYFPSSHLRGDTESTGSNTSSPAIGRRASIAVTGIKKSSMPVIAKVIKAYNATKDTELALQMGQLIQIKSMDDAHWWEGTAQSRGKKKETGWFPAECVQLMEKKASTTGSTGGGAASIPSGIAPALGARVARKSMLRTGSSHSLLDEVIAVAKFSYAAKKSDELSFSEGDSIVVRHRDESGWWEGELNGQVGYFPISYCEEPAGGAQGITKLDGGRSNMVIQEIDWAAVVGAEIASTVTPAEAKRQNLIYELIFTEQSYVKDLELVMELFYHPMRDKGLVTKQELHTLFTNWEHLLTCNQRLVQALVQRQQADHFIVKSLGDILVREFPQMEGYIQYCSGQAKSATFLSNKTGVAWIQFLKKVAQDTRTGHLPLSSFLLKPMQRITKYPLLLQKIKQHTPTDHPDYANMCLALEKSENLAAAVNEGVRRKESEHKLKWIQAHLNTDTLTEKLDVTSDTNSVGPRQYLHEGCLYKLKSGKELYVFLFNDLVLMTRRYKPMLAGARADADFQFYIYKKPIPVHMIAVKDVVNPAYDNCVFQIIHNQEVHNLRTENARERKLWIDRISQAHQSYLEHQIETSKGRTFSQSDTRLGTLTLTVVEGINLTAADQNGKSDPYCVIRLGDQCVKTKVIKENLNPRAWNSEFFLTITSLDERLNVSVYDQDEYSKDDFLGSVEFDIRTLEAMDPFRLRRLQMSLDGVNSGEIVLKFEFNFKAAKN* # PASA_UPDATE: g5696.t1, single gene model update, valid-1, status:[pasa:asmbl_9709,status:3], valid-1 NODE_85_length_42271_cov_47.7555 . gene 18018 20092 . - . ID=g5696;Name=g5696.t1 NODE_85_length_42271_cov_47.7555 . mRNA 18018 20092 . - . ID=g5696.t1;Parent=g5696;Name=g5696.t1 NODE_85_length_42271_cov_47.7555 . five_prime_UTR 19983 20092 . - . ID=g5696.t1.utr5p1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 19936 20092 . - . ID=g5696.t1.exon1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 19936 19982 . - 0 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 19665 19764 . - . ID=g5696.t1.exon2;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 19665 19764 . - 1 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 19476 19570 . - . ID=g5696.t1.exon3;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 19476 19570 . - 0 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 19236 19346 . - . ID=g5696.t1.exon4;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 19236 19346 . - 1 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 18985 19115 . - . ID=g5696.t1.exon5;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 18985 19115 . - 1 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 18577 18669 . - . ID=g5696.t1.exon6;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 18577 18669 . - 2 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 18291 18392 . - . ID=g5696.t1.exon7;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 18291 18392 . - 2 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . exon 18018 18164 . - . ID=g5696.t1.exon8;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . CDS 18100 18164 . - 2 ID=cds.g5696.t1;Parent=g5696.t1 NODE_85_length_42271_cov_47.7555 . three_prime_UTR 18018 18099 . - . ID=g5696.t1.utr3p1;Parent=g5696.t1 #PROT g5696.t1 g5696 MTNRIALDEMAKGDAWIAECDRLNRLADEVMADLNARSKTQRTGGSASKIVAGIQNKLGKLSADTFKLEDALIAEARQFRMPERELSRRKEEVQRLKNRVEQMRQQQRKEVTFATDDDDDLLDADTVGSGAAAPRAWGRETDESRSLSNDGLLQRQTDVMRQQDDGLEALSQSIRRQREIGVTLSDTLDADADLLDDLERGTDHTKSLLDRETKHVLSVTEKASSCGYIICILLLFVAIIVVVAIPT* # ORIGINAL: g5700.t1 original gene structure, not modified by PASA NODE_85_length_42271_cov_47.7555 AUGUSTUS gene 41836 42127 . - . ID=g5700;Name=g5700.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS mRNA 41836 42127 . - . ID=g5700.t1;Parent=g5700;Name=g5700.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS exon 41836 42127 . - . ID=g5700.t1.exon1;Parent=g5700.t1 NODE_85_length_42271_cov_47.7555 AUGUSTUS CDS 41836 42127 . - 1 ID=cds.g5700.t1;Parent=g5700.t1 #PROT g5700.t1 g5700 LHSIDPTEKRVLIDVRETNEWAEGRIPGAVHLPRGIAERDVHKVTSDFDTPLYVYCQGGLRSALVVDNLAKMGYKHAVSVDGGYAEWAKRGYPVEK* # PASA_UPDATE: g4315.t1, single gene model update, valid-1, status:[pasa:asmbl_2512,status:12],[pasa:asmbl_2515,status:12],[pasa:asmbl_2516,status:12], valid-1 NODE_174_length_33455_cov_41.3656 . gene 19571 27306 . - . ID=g4315;Name=g4315.t1 NODE_174_length_33455_cov_41.3656 . mRNA 19571 27306 . - . ID=g4315.t1;Parent=g4315;Name=g4315.t1 NODE_174_length_33455_cov_41.3656 . five_prime_UTR 26964 27306 . - . ID=g4315.t1.utr5p1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . five_prime_UTR 26535 26545 . - . ID=g4315.t1.utr5p2;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 26964 27306 . - . ID=g4315.t1.exon1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 26058 26545 . - . ID=g4315.t1.exon2;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 26058 26534 . - 0 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 25576 25723 . - . ID=g4315.t1.exon3;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 25576 25723 . - 0 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 25002 25234 . - . ID=g4315.t1.exon4;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 25002 25234 . - 2 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 24304 24722 . - . ID=g4315.t1.exon5;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 24304 24722 . - 0 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 22919 23950 . - . ID=g4315.t1.exon6;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 22919 23950 . - 1 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 21517 22717 . - . ID=g4315.t1.exon7;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 21517 22717 . - 1 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 21104 21249 . - . ID=g4315.t1.exon8;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 21104 21249 . - 0 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 20836 20860 . - . ID=g4315.t1.exon9;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 20836 20860 . - 1 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 20316 20505 . - . ID=g4315.t1.exon10;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 20316 20505 . - 0 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . exon 19571 20134 . - . ID=g4315.t1.exon11;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . CDS 19659 20134 . - 2 ID=cds.g4315.t1;Parent=g4315.t1 NODE_174_length_33455_cov_41.3656 . three_prime_UTR 19571 19658 . - . ID=g4315.t1.utr3p1;Parent=g4315.t1 #PROT g4315.t1 g4315 MKLFKKKDKEKDKDEKDKKDKKDEKKDGKGDASPVTLTPKSSPVIKRVISVSVTVSSSEGDSGSDATRTRAENTKEQLAAKYHAVGGQRYNPLEARRLQQGGLGQPDSVPSPADGGDSHGEATGGVQRTIPMLRMAEHERLIDGRKTSRGSKWDWLQTRGIIRVYLRNQTFKTLPCDLYTTAAEMAQLAAKKFGTAEVGYIYAQLYDCGAERRLEPDECPLCLQDQWLKDVGYGDEDARQQQGRYDHSYLFRFIYSSSGSPLEHSWEQICKKLNQYAATGAGSDFHHTARPGKARPMLPQVADRLDLSNQSLGTHINRDVSLASVLLKGVIQFSLGRLSLAGNVLQSLPPELCQLPALTSLDLSNNLLSTLPDEIASLGRLEMLDLAQNQFEHVPASLCELVHLRHLVLADNRIQDLPQNTVKLTSLEFLDLRCNRISQISACVAALPALSTLDIRGNTVSFLPPGNSSLRNVLCDDNRVSVVRLSHTSVAELSLRRNGLTVFSPAAQCLSALAVIDLSRNWLTALPDSFEAMPNLRVLRLDGNRLTKLPPSVAKLSKLETLSASRNALSSLPESVGTMVGLRTLLLHANSLTHLPDDVFHLPSLCVLNAASNLIQYIPVPDPSEGSRAALAAYPPDSRPTSTEDLLAPSAFVGKRSPAVKWRNSLRSDGAWSDAEERENDAPALGKWPVLRELYLGDNNLDDECLSAVGQLTSLRVLHIGYNSLTHLQGLESLVKLHTLWAVGNDIGSVEGLAKLTALRALFVSNNKLSMVPAELSHLKQLAVLDARDNNISASVPTGYGLSSGGSVSGAGSLSSTTSSMHAGGSLGANSIASLAGVHANPPQPIVWNACPVLVHLDLTDNPRLLITSLRADFGKLTSLQLLGLEGVALPPATAQGSSSSSNPTTPTSSASASASVSAFAASSADETVDALLAKAIRRDTPVLASVPRELARYCFRSGAAEVRTIAGGGSSGVFDAVAFRDDAYRGRVREGLYALFDGHCGGGSVATFAAEKLSGTLAEELSRSTAGAEQTRRAMHRAFLGVNRKAGCAHVGKHAGASGVAVYVAGDSLCAANVGNAMAVLCRNGRAVPLSRAHVPTDAGERERIRQVGGIVTGSDRIAGTVHVSRAFGHFVHQPSVNCDAYTTAVELAGDDACVILATGSVWEVLSPQMAVDIAGSQQSPNKAAQRLRDFAWLYGARDNISVVVCYLPRATIKGRRRITLVNAVRTSGADTQEIPPPIGRVSLVFTDVVGSIALWEMCESAMRAAVREHNEVLRRLLKEHRGYEVKTEGDAFMAAFDHPMTALKWSLAVQTAMLTIDYPADMLARPECAVVKDSGGDIVYRGLRVSMGIHTGSPDCEPDPVTGRMDYFGPMVNRSARVASVAAGGQVVISLGAWQEIAASKGCETLLQSVFVKDLGSFKLKGLGKEETILLVVPSQLKARAEAAPS* # PASA_UPDATE: g4312.t1, single gene model update, valid-1, status:[pasa:asmbl_2511,status:12], valid-1 NODE_174_length_33455_cov_41.3656 . gene 12184 13503 . + . ID=g4312;Name=g4312.t1 NODE_174_length_33455_cov_41.3656 . mRNA 12184 13503 . + . ID=g4312.t1;Parent=g4312;Name=g4312.t1 NODE_174_length_33455_cov_41.3656 . five_prime_UTR 12184 12185 . + . ID=g4312.t1.utr5p1;Parent=g4312.t1 NODE_174_length_33455_cov_41.3656 . exon 12184 13503 . + . ID=g4312.t1.exon1;Parent=g4312.t1 NODE_174_length_33455_cov_41.3656 . CDS 12186 12947 . + 0 ID=cds.g4312.t1;Parent=g4312.t1 NODE_174_length_33455_cov_41.3656 . three_prime_UTR 12948 13503 . + . ID=g4312.t1.utr3p1;Parent=g4312.t1 #PROT g4312.t1 g4312 MIALKAQLMPPRRSVAAKTAATALPPRSPPARLKRAVAATNADHNEGSPAAKRTRTATQTDRASVTLKGEAVSSDTAENDSTATTPAALRARKRGRAAAAEQHPDAVAVAAIPAETVPDDTRRAGKRARSVANNAALVVATAIDADSKPPPETAAKGRWASQRGKKEEATTESRSAEETQTALGAAKGKAARGAPKEGMLGAVDLDAILFRPQDDLSSSDDDAAFASRIRAPRVRPIAASSAGVAVNAAAPMD* # ORIGINAL: g4314.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 15845 18820 . + . ID=g4314;Name=g4314.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 15845 18820 . + . ID=g4314.t1;Parent=g4314;Name=g4314.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 15845 18820 . + . ID=g4314.t1.exon1;Parent=g4314.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 15845 18820 . + 0 ID=cds.g4314.t1;Parent=g4314.t1 #PROT g4314.t1 g4314 MESAARTKAVARKEAGNKLYSAGDFANAIKCYKDASSLDPTDPVFPSNEAACDYELGEYEKALAASDRAIEILRRMEPLDAKLEALFHKCCVRKVKSLFHLGHDEAVLWAAMSLTSGDQEVEKILAVVNSARLPRDRPLTRFENFRPLRKINTREYYCVGHDIALSAMRGDLRETTSASRPFKMFTDTKGAMSLRSLPADRLGKMAFLFAGVGDGRHMLATLYDTHRQLKACKPSVHANLKMHIAINDFKAASLAKNLVMLCAIMDIATAEEKKIAAGGWTGTIGLAASGGRTPIQEDIEYAMAVGTAHYIFLGAVMPAFARTRLDAIVSGLLSGARADVLYSVVMDDNTKKDVFDILRLWANPPETHSVADILSMYTPRRGLGDYESLRATGQLSDEMYEQLTYGIQEREAELTRLLKSRSFNFGVPGSQPQKDPVMRHIIKRLAAAPASEMPGAYVESIVFDSVPIVLPPLGAPIEAEIWGLLGDLSLAQVVTPAFKNSPILKKLRNYVEKNWFENVTLFEHCEMMQELDFDPFGVTMNLVSIQWCEEPDRPTTIVDWTEAFFRGAGRELLRGTRARTLRLEMFRGDTHEVSPRLAATAEEREAQGLPSLFDRIFVSNIPDYTGLPAIFVHHLPLLRPVPDAFLHQSILLNTGVWADYDEYIHSYSLIPGADAAQRHLGLRLVGGDLWCYPMWSFAGNWPLPLDKLLARPALEQWLMRLFLHLALPSPRGARSPGVEQVASSIAVFVQFVDFLRDVGYPAHWLSHVLDSLLGDAVMTNVAVPTTSPNPVMTSFRDGKTAYRLNVAPFVPELRTVTSLLLPSLAVRPTLPVGNPGDVRMLRMSFTGETTDIQIGPQTMVYNSRVMGLAIGSSAALAGLLGGPVSMFMRMGLQQEPSVPVWDDLLSRHRSRAEGAGAKHDLFLFSAIHLDSKVETQASWFGRSECPHTVELPMSEAALMEFQKSGFSAVLLRTDNWVVVSRPVSMKNATVL* # ORIGINAL: g4310.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 6620 7402 . - . ID=g4310;Name=g4310.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 6620 7402 . - . ID=g4310.t1;Parent=g4310;Name=g4310.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 7019 7402 . - . ID=g4310.t1.exon1;Parent=g4310.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 7019 7402 . - 0 ID=cds.g4310.t1;Parent=g4310.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 6620 6724 . - . ID=g4310.t1.exon2;Parent=g4310.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 6620 6724 . - 0 ID=cds.g4310.t1;Parent=g4310.t1 #PROT g4310.t1 g4310 MARRNQRKEEESAAAATPPPTRGQPAASSGGSPSPFKSGTGASTAPASAAPSKPKTGQEALLQWCQNMTVGYDGVEITNFSRSWASGLAFFALMHRLAPSRLKSYETVDKGNREALFQAAFDAATAEGITCLLDVEDMVATERPDAKCVMLYVSEIYKKYKR* # ORIGINAL: g4316.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 27788 33333 . + . ID=g4316;Name=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 27788 33333 . + . ID=g4316.t1;Parent=g4316;Name=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 27788 27876 . + . ID=g4316.t1.exon1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 27788 27876 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 28009 28095 . + . ID=g4316.t1.exon2;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 28009 28095 . + 1 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 28221 28322 . + . ID=g4316.t1.exon3;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 28221 28322 . + 1 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 28692 28835 . + . ID=g4316.t1.exon4;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 28692 28835 . + 1 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 29270 29390 . + . ID=g4316.t1.exon5;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 29270 29390 . + 1 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 29769 29855 . + . ID=g4316.t1.exon6;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 29769 29855 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 30128 30208 . + . ID=g4316.t1.exon7;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 30128 30208 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 30494 30679 . + . ID=g4316.t1.exon8;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 30494 30679 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 31004 31096 . + . ID=g4316.t1.exon9;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 31004 31096 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 31398 31583 . + . ID=g4316.t1.exon10;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 31398 31583 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 31798 32057 . + . ID=g4316.t1.exon11;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 31798 32057 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 32352 32436 . + . ID=g4316.t1.exon12;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 32352 32436 . + 1 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 32880 32993 . + . ID=g4316.t1.exon13;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 32880 32993 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 33220 33333 . + . ID=g4316.t1.exon14;Parent=g4316.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 33220 33333 . + 0 ID=cds.g4316.t1;Parent=g4316.t1 #PROT g4316.t1 g4316 MSADAKALASKRKVAFGLSCELDLNVSIRIGLLEGVARQRGFHALAEDPHYRYSGVHQSELPELYVTCQLFVAGEDLTIPVQTCHRAFETVLDWSEWLVLPVKYRDIPRTAQIAVTVWDACGPRRTIPIGGATVSLFGKNGALRRGRHKLRLWPDREADGSTPTSTPGKSGAKDEIDRLDKLTKRFERGEMVRVDWLDKAVLREVQSVKHREGLGAEGMRLGIEFPEFECPVIFQEKEGPVALAANLATFAGDLVLVPDAEMGKENLVELKHRKLTRSHRRGPLDHDLKPNAGIRDQLNTIVRYPPTRLLSMEEKDLLWKFRFYLTREKKALTKFLKCVDWTDASEAVQASALLDRWEPIDVDDALELLSPQFPNTAVRQYAVSRLGRADDEELVLYLLQLVQALKYDDLSGPKDLVSSQSLPQTPTVQVPEDAAIQEQLAQAQTDSAADSTAGTDKCLADFLIARARANPVLGNYFHWYLTVEADERRTGHVFAAVKEDFMRTLDSNPESHHLRDSLLRQIQLINTLGLIVREMKLTKESRPKKIKRLRQILAETESLVKFDPLPLPIDPEVLAVGVVPGT* # ORIGINAL: g4311.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 7530 10839 . - . ID=g4311;Name=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 7530 10839 . - . ID=g4311.t1;Parent=g4311;Name=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 10637 10839 . - . ID=g4311.t1.exon1;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 10637 10839 . - 0 ID=cds.g4311.t1;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 10221 10394 . - . ID=g4311.t1.exon2;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 10221 10394 . - 1 ID=cds.g4311.t1;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 8662 9913 . - . ID=g4311.t1.exon3;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 8662 9913 . - 1 ID=cds.g4311.t1;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 7530 8330 . - . ID=g4311.t1.exon4;Parent=g4311.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 7530 8330 . - 0 ID=cds.g4311.t1;Parent=g4311.t1 #PROT g4311.t1 g4311 MDDGGRSPKGKVRLGSLGDPVRDGYLYKQGHTFKTWKQRWFAMKNRTLYYFKSNGLKETALGAIDLNGYMVDLVEDDELLLKFKKNEPCIFTLQHGDPNKPDFILVAENEIDLEGWVQFILMEMFREFARFSVSNFLDDESTESSEVDHIPQESNPVASAFAPPSVEATNKSAESEEEAKKRRLEENRRLRRERELAAVREEEERKKRVLDEEVLQRDEAERLALQRKAEYEREEEERLCRDAKEQRERDEREQKEQESRRWQREIERAEREARAAEEQQREDRERERIERNAREAEERRRLEREKEEQEALAREEREREERRRLDNERADRQRLEKEAQEKEDRERGVLEGKAREERARREKEMLDLEARETEERLKRERDAKEREDKRRIEREKRDEEERLRFEKEKEERQRLDKERAERQRLEREKEERLRLEKENEDRLRLEREREERQRREIEERKRAEKEKEERQRLEKEKEERQRLEKEKEDKQRIEKEKSSALAAPVSAAGDRRSKLNDKAQLWEQRMKEAEEAKERDIRSAKSVSTKEAVLEISGLSTAAATAVAPKAASPAPASPSSALARPVSTLSPSPSSSPSARPASTANAPASYLSPSSGSTSSPASLRPTSAYSPQAAPSPSSLRPTSTVSPSTLSPTPTPSSHSTGLRPLSAASAIAPKAAPVESTPKNTFSRPATIASPSPSPLKPATPASPAASSTERTTAFAPPPSVASDGRVQVFDPSLGTCGRCGQGLSGQVAEVAGVTFHLACFGCFGCNKKLSTSCLNIDGKFYCDGCGKKAFISRQARILFIFAA* # ORIGINAL: g4307.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 160 326 . + . ID=g4307;Name=g4307.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 160 326 . + . ID=g4307.t1;Parent=g4307;Name=g4307.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 160 326 . + . ID=g4307.t1.exon1;Parent=g4307.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 160 326 . + 2 ID=cds.g4307.t1;Parent=g4307.t1 #PROT g4307.t1 g4307 DICTTNSKRWMSSSALSSMQRTPACLFTATKRPAPCLSLPTQRTMLQHISSGSVR # ORIGINAL: g4313.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 13856 15296 . - . ID=g4313;Name=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 13856 15296 . - . ID=g4313.t1;Parent=g4313;Name=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 15270 15296 . - . ID=g4313.t1.exon1;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 15270 15296 . - 0 ID=cds.g4313.t1;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 14927 15054 . - . ID=g4313.t1.exon2;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 14927 15054 . - 0 ID=cds.g4313.t1;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 14455 14630 . - . ID=g4313.t1.exon3;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 14455 14630 . - 1 ID=cds.g4313.t1;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 13856 14025 . - . ID=g4313.t1.exon4;Parent=g4313.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 13856 14025 . - 2 ID=cds.g4313.t1;Parent=g4313.t1 #PROT g4313.t1 g4313 MAQNYIPPTNFGMVEEDLYRSGQPNELNFPFLEKLRLKQIIFLAPDDPSRPLLNFVDDHDIELIHLGRKDSQNQSWNPISEETVIEALKIILDPRNYPLHIMCNLGRHRTGTLVGCLRKLQRWNLTSIFEEYRRYAGSKVRLLNEQFIEFFDTDLVAIPPNHPNWL* # PASA_UPDATE: g4308.t1, single gene model update, valid-1, status:[pasa:asmbl_2513,status:3], valid-1 NODE_174_length_33455_cov_41.3656 . gene 446 2766 . - . ID=g4308;Name=g4308.t1 NODE_174_length_33455_cov_41.3656 . mRNA 446 2766 . - . ID=g4308.t1;Parent=g4308;Name=g4308.t1 NODE_174_length_33455_cov_41.3656 . five_prime_UTR 2600 2766 . - . ID=g4308.t1.utr5p1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . exon 2554 2766 . - . ID=g4308.t1.exon1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . CDS 2554 2599 . - 0 ID=cds.g4308.t1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . exon 2279 2347 . - . ID=g4308.t1.exon2;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . CDS 2279 2347 . - 2 ID=cds.g4308.t1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . exon 2071 2126 . - . ID=g4308.t1.exon3;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . CDS 2071 2126 . - 2 ID=cds.g4308.t1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . exon 1838 1853 . - . ID=g4308.t1.exon4;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . CDS 1838 1853 . - 0 ID=cds.g4308.t1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . exon 446 1545 . - . ID=g4308.t1.exon5;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . CDS 1139 1545 . - 2 ID=cds.g4308.t1;Parent=g4308.t1 NODE_174_length_33455_cov_41.3656 . three_prime_UTR 446 1138 . - . ID=g4308.t1.utr3p1;Parent=g4308.t1 #PROT g4308.t1 g4308 MERIFKVIVVGNFRTGKTSLITRYVSDSFSDNYAQTIGVEFFLKIIQWSKNETIRLHLWDLAGQDRFIGLTHVYYRGADAAIVVFDITREDTLDAARKWKRDVDGKVRRPDGSRLPCILAANMCDLDVRAVSDDEIARFAEEEGFVAWFETSAKTGQGVKGAVESLVGEMTLTDHSPSSTRTSISLDDADRERRWCC* # ORIGINAL: g4309.t1 original gene structure, not modified by PASA NODE_174_length_33455_cov_41.3656 AUGUSTUS gene 4223 6153 . + . ID=g4309;Name=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS mRNA 4223 6153 . + . ID=g4309.t1;Parent=g4309;Name=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 4223 4372 . + . ID=g4309.t1.exon1;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 4223 4372 . + 0 ID=cds.g4309.t1;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 4499 4708 . + . ID=g4309.t1.exon2;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 4499 4708 . + 0 ID=cds.g4309.t1;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 4947 5103 . + . ID=g4309.t1.exon3;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 4947 5103 . + 0 ID=cds.g4309.t1;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS exon 5477 6153 . + . ID=g4309.t1.exon4;Parent=g4309.t1 NODE_174_length_33455_cov_41.3656 AUGUSTUS CDS 5477 6153 . + 2 ID=cds.g4309.t1;Parent=g4309.t1 #PROT g4309.t1 g4309 MRCQKCNTEKLSEEFFHGDISDECNHPPLPQCLSGNLKLVRIRSTPSVFVCLGANFEDDDDDENLVCPTCNAELCDAESKYLRESIARATARGVFNYVGGGPNGGDRSTEISLVFLNGDMDIDDRAGGVPCTLGSLGVPSGATIRVAVAPYTAYVGQHRIAGAANDQHGNAQGLYVCGTSRRIEEKGFTILRYADAPPSPQQLQMDLASASQLWIISNKFSTLNELHIAVIKNAFDRGVGVYIWGDNEPFFADANAISMRLLGRDVYMSGNTLGTRCVGVLPDRSIRGRAGFISNHPITTGIANLFEGNTIATVQLTPALIPIVCGSAGNLVTAAYDSNGKRLIIDGGFTRLYSQWDEAGSARFVANAAAWLYNFENTGAMRALVHAAPIRGVALNR* # ORIGINAL: g4452.t1 original gene structure, not modified by PASA NODE_2139_length_7540_cov_40.5451 AUGUSTUS gene 4367 6407 . - . ID=g4452;Name=g4452.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS mRNA 4367 6407 . - . ID=g4452.t1;Parent=g4452;Name=g4452.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 5948 6407 . - . ID=g4452.t1.exon1;Parent=g4452.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 5948 6407 . - 0 ID=cds.g4452.t1;Parent=g4452.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 4367 5661 . - . ID=g4452.t1.exon2;Parent=g4452.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 4367 5661 . - 2 ID=cds.g4452.t1;Parent=g4452.t1 #PROT g4452.t1 g4452 MPDECSRASVVRTLQDTGFHVDPVSNESAVVEALRGKDGKPSDYDMSVVCYSLLKRLGPSVALRTQEQWRLEQQSSDHVNFPASTHAVTEESGTVADGKCLFIPSPLLLVSKPSTHHEARGWLASRSPHPFRVMLYPPRQSALLEFLRSAILGRKGNNPADPHSVHNPSSRDEASSDVDHGAAALARVPHLASLRRTSSVSPTLRSIPSTDSISERNADAVERWEEERTPESLPSHAFLPSVIRSDSEGRPTLDWSPHPTASPAVVSSPGNVPGVASSWNAYGIESGGGAAGAAGDVGGVHEGSRVSRGEGSHKIESFVPPTKFVPQGDTGCIPFNNRMRRDVRVLVVDDNRINRLVAVRFLSFLGFASDVACDGSEALIRRRSCDYDVIFMDINMPNMGGFDCARVIRALESERAREEFEDAVMSILREEEDAYLQNMDVLDELKERFESSENAQGPSTNAHCVTAVHMAESTRAPPTNSMASPVGGNTDGHDDAVSVSSDVSAVCEISVADAHILREKVERRIASEGLSIELFLRHTPIIALSSHTGDSLAADCAAAGMSGVLSRPLSADAILDVIQRVVVS* # ORIGINAL: g4451.t1 original gene structure, not modified by PASA NODE_2139_length_7540_cov_40.5451 AUGUSTUS gene 2344 3954 . + . ID=g4451;Name=g4451.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS mRNA 2344 3954 . + . ID=g4451.t1;Parent=g4451;Name=g4451.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 2344 3954 . + . ID=g4451.t1.exon1;Parent=g4451.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 2344 3954 . + 0 ID=cds.g4451.t1;Parent=g4451.t1 #PROT g4451.t1 g4451 MASFSAVPIEVFVGHVVPYLSNADLLSLARTNSSLRFHLRSQCILKLREPITARFCEDAEFRSQLLAVIPMECLSIVVQNPRNVSMLAGVHAVKLVSGESSTEVDEQNDCHTCQTAEPGVVGSASLGGVHSLDLSDWNHVVDVCALGRVHTLKYVSRCKGIRDVSALGRVHTLNLSCCERVADVSALGGVHTLDLSSCKGITDVSALGVHTLNLSCCERVADVSALGGVHTLDLCLCEMVVDVSALGSVHTLNLGGCDHIVDVSALGSIHTLNLSYCDALVDVSSLGGVHSLDLKECHCVVDVSALGRVHTLNLNDCFNVTDVSTLGSVHFLNLSGLSQFVDVSALCRVHSLTLGHSARLVDVSLLGSVHSLTLNACCGVADVSALGSVYRLNLAYLSELVDVSALGSVHSLSLLSCNKVTDFWALGGVHTLYISDCNGLTDVSALRSVHSLTICCCAGVRDVSALGFVHYLCLYACHGVVDVSALGGVHNLNLTGCEGVVDVSALGGVYSIDLTGCKNVVDVSALANVKCVLRRY* # ORIGINAL: g4453.t1 original gene structure, not modified by PASA NODE_2139_length_7540_cov_40.5451 AUGUSTUS gene 6442 7197 . - . ID=g4453;Name=g4453.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS mRNA 6442 7197 . - . ID=g4453.t1;Parent=g4453;Name=g4453.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 6442 7197 . - . ID=g4453.t1.exon1;Parent=g4453.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 6442 7197 . - 0 ID=cds.g4453.t1;Parent=g4453.t1 #PROT g4453.t1 g4453 MRQIITNLLGNAIRFSEGKSIVLSCAVSVYDAKSLFLPPASASPGMGHKRTETSLVIMPDGRHVLFPRHGNRSRTGSSSSDGGGRRHSFSDSVPPRLENLAMNAHGQQHQQHQQHLHLQQHDGQMAIVTLTVADSGRGIAEETLPHIFEKFEQGILDADMKDGGSGLGLPIVKQLVNLMGGQICVSSTHGAGATFTLRIPLTMATPTTQSAHMMFRTKPKATAACGLSPVISIASSGGQHCGVRVDDNGNG* # ORIGINAL: g4450.t1 original gene structure, not modified by PASA NODE_2139_length_7540_cov_40.5451 AUGUSTUS gene 90 1275 . + . ID=g4450;Name=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS mRNA 90 1275 . + . ID=g4450.t1;Parent=g4450;Name=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 90 284 . + . ID=g4450.t1.exon1;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 90 284 . + 0 ID=cds.g4450.t1;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 384 502 . + . ID=g4450.t1.exon2;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 384 502 . + 0 ID=cds.g4450.t1;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 778 923 . + . ID=g4450.t1.exon3;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 778 923 . + 1 ID=cds.g4450.t1;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS exon 1250 1275 . + . ID=g4450.t1.exon4;Parent=g4450.t1 NODE_2139_length_7540_cov_40.5451 AUGUSTUS CDS 1250 1275 . + 2 ID=cds.g4450.t1;Parent=g4450.t1 #PROT g4450.t1 g4450 VKVSDFGVSGQLASTISSCVSWVGTVTYMSPERILGQSYSVASDIWSFGLSIVELAIGRFPYAMQGPGQGSMGFFDLLDFIVDQPAPALNPNVFSRELCDFCAQCLLKNPQDRPSAKALLDHPFMQRGRDANLALYVNERLADPIKEPRRGMKGGLVGETL* # ORIGINAL: g8274.t1 original gene structure, not modified by PASA NODE_3341_length_3689_cov_38.0971 AUGUSTUS gene 84 2905 . + . ID=g8274;Name=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS mRNA 84 2905 . + . ID=g8274.t1;Parent=g8274;Name=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 84 233 . + . ID=g8274.t1.exon1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 84 233 . + 0 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 363 702 . + . ID=g8274.t1.exon2;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 363 702 . + 0 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 933 1065 . + . ID=g8274.t1.exon3;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 933 1065 . + 2 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 1319 1435 . + . ID=g8274.t1.exon4;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 1319 1435 . + 1 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 1629 1798 . + . ID=g8274.t1.exon5;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 1629 1798 . + 1 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 1979 2142 . + . ID=g8274.t1.exon6;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 1979 2142 . + 2 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 2449 2654 . + . ID=g8274.t1.exon7;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 2449 2654 . + 0 ID=cds.g8274.t1;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS exon 2800 2905 . + . ID=g8274.t1.exon8;Parent=g8274.t1 NODE_3341_length_3689_cov_38.0971 AUGUSTUS CDS 2800 2905 . + 1 ID=cds.g8274.t1;Parent=g8274.t1 #PROT g8274.t1 g8274 VPTATFLQLLLEASGGDQSRQPPSTQYLLKSLSLKGIAKEGAAHFDATVMISVLGDGWIACPLFCDKISVLKANVAPVCDTVSASAQASGSAAPAHLGVINGSLAFTTSAAGDYVVSVSFSAPYATARATGLRLDLIPRCMENSLDFTVPHAGVRIKVEPSHDTLQSQLPVTATLPSGAECVTCSIPPSDALNVQWMRVDQADELVQKEGERAAEKSLVTVEQHVLMSVGEGMVACHIRFDFNMIHNTKSVFDVAFSGCARILSVEGDAIKRWEVFEYDRVDSQARSQLDTLQSHDEKDKAPMEAFRLLRVLLDYGVEGAYNLVVTAEYDMVSTSCETDTPTFACLDVDREKGQLAVEGLAKIDVREASDGINQASSNPLLLAYKFLQSRYHLRIDVTKHGDVGVLICITDSAWLEVTHADAKTLYRAVLRMRNTQKQYMRVTIPDFDKIELWSTTVRGVG* # ORIGINAL: g147.t1 original gene structure, not modified by PASA NODE_1888_length_8730_cov_38.4475 AUGUSTUS gene 4880 6814 . + . ID=g147;Name=g147.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS mRNA 4880 6814 . + . ID=g147.t1;Parent=g147;Name=g147.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS exon 4880 6250 . + . ID=g147.t1.exon1;Parent=g147.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS CDS 4880 6250 . + 0 ID=cds.g147.t1;Parent=g147.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS exon 6518 6814 . + . ID=g147.t1.exon2;Parent=g147.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS CDS 6518 6814 . + 0 ID=cds.g147.t1;Parent=g147.t1 #PROT g147.t1 g147 MKHELAQSLYYILVLTGVAILYLYGTGTLTALASNWDGVRDLTENAAQGSAGSASQRDSRNVGLLSIWSSQQFADSEANSASVSGGGELLSPPSMRTTLLADELDRIRRYNHSSWKDGMKRILVRGYAWDRVTLFRDVGSKVGYRLVAQKPPLSNVPPPDVIGIMCLIMSIDHCITSTEYVKLPRHQKVSKMRGLIGVIYGKDAFCRVMRDALDGFKPKQRVPAIGSAYDKHRDVDPRTFVFPCYILPKETPMLRKDVAADKFPAGQRWIVKPARSYGGHGIFVADSVDDVPRTAKAGAEPWVAQPLLDPPFLIDGFKFDLRVYVLVTSLSPLRLYVHDMLLVRFAAHRYGGSANATATNGTAGDDGGKRTQLLTNTSVNTAIKKMSDLVWSAARLISYLISAGHDAVALFARIRAAIVRSFLATDNAMAHINNEHSYMMLGVDVILDANLAPHIIEINRNPSLVRENSAQTWYWQMKDSIARDLLAIVYGDDTPGCAERLFIDLERIGAVYEPEHPKSSVCEASNKKNWLCVNKAELLSLLDSRWESVVVRVPP* # ORIGINAL: g148.t1 original gene structure, not modified by PASA NODE_1888_length_8730_cov_38.4475 AUGUSTUS gene 7483 7885 . + . ID=g148;Name=g148.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS mRNA 7483 7885 . + . ID=g148.t1;Parent=g148;Name=g148.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS exon 7483 7656 . + . ID=g148.t1.exon1;Parent=g148.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS CDS 7483 7656 . + 0 ID=cds.g148.t1;Parent=g148.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS exon 7769 7885 . + . ID=g148.t1.exon2;Parent=g148.t1 NODE_1888_length_8730_cov_38.4475 AUGUSTUS CDS 7769 7885 . + 0 ID=cds.g148.t1;Parent=g148.t1 #PROT g148.t1 g148 MEAKGATGFSSDGGDVIRRSVAVSASAHIPTETDMAQLADVYEIERCCELIAKHGYARIALQFPDELLGASAAVAKEIERRTGKRAFILGDTSYGR* # PASA_UPDATE: g146.t1, single gene model update, valid-1, status:[pasa:asmbl_2914,status:3], valid-1 NODE_1888_length_8730_cov_38.4475 . gene 21 3897 . + . ID=g146;Name=g146.t1 NODE_1888_length_8730_cov_38.4475 . mRNA 21 3897 . + . ID=g146.t1;Parent=g146;Name=g146.t1 NODE_1888_length_8730_cov_38.4475 . five_prime_UTR 21 21 . + . ID=g146.t1.utr5p1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . exon 21 174 . + . ID=g146.t1.exon1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . CDS 22 174 . + 0 ID=cds.g146.t1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . exon 472 613 . + . ID=g146.t1.exon2;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . CDS 472 613 . + 0 ID=cds.g146.t1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . exon 843 949 . + . ID=g146.t1.exon3;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . CDS 843 949 . + 2 ID=cds.g146.t1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . exon 1162 2219 . + . ID=g146.t1.exon4;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . CDS 1162 2219 . + 0 ID=cds.g146.t1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . exon 2617 3897 . + . ID=g146.t1.exon5;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . CDS 2617 3550 . + 1 ID=cds.g146.t1;Parent=g146.t1 NODE_1888_length_8730_cov_38.4475 . three_prime_UTR 3551 3897 . + . ID=g146.t1.utr3p1;Parent=g146.t1 #PROT g146.t1 g146 MWRRRGNRTLRSLADLTSDARLFANLHASFAWVLRTCASRLFEKQIEGPSMICAQSEQWDPSHSGNLLAGDPDSSFSEGEVLASGEVFTSLRHLHRTIGAEFFRLVVYNLSVGNQVIVRGVARDTVSSVLLLLKDLLPPTCCSIVLYSRMYRDRWECNLLGLCPRATVPAYVDTSSYVLLDIERAAAGQRRRRQSAASSALGETDTSLAGTGNHDRAPTALNEMAGPVFAALGNGDRGPPKSGIGRAVAGVSAADSRPKSGSATAETLPNGVTTADSTAKGDGHKDGFIRPDLPIFHALLNDMDDISLAKSPTGVVVGEDADVRPRGSSNPHNASSSRRSMPWSRGVGDAFGGCEENGDVDDCAVSDFSDCRFVLHAGNHREATSGNSFTRAMERVLGPDCSALRGEASWWNADTIGLLSMRMGTMSVSASASASASGLGGRDRTASAASSTRSWSVNAGDAAREDAPVDDFVCEQWLLALKEEWMNKAKLFFQFSKSLEGNTGNAPHQTPSATSTTSHPPTPLFARSVQSSPHSPHSHTPHTAHTPHTHHSPHTPHTTPHPQPRATNGPSTPSGIASTASRILSPATRSHSDLSSPFAPDTPVPITPNSHAGSKDASSELIVRFLRIVGLAQDDLAILRFWTSGLSKQHRTRLLLDTQHSLQGGSHLGRPGTSPPPSSTIGPKSRSPSIPVGTRTNSVPGGAGGGGGAAAVAVVVGTAGSTTSSSSPVANSHSSNSGPQSFVAGMPSSLLMGGTPGASSVGLVRAGQSGSIGSASGLPYAGYTMAGSLSKANGLRY* # PASA_UPDATE: g9588.t1, single gene model update, valid-1, status:[pasa:asmbl_2505,status:3], valid-1 NODE_1745_length_9431_cov_54.0264 . gene 65 2289 . - . ID=g9588;Name=g9588.t1 NODE_1745_length_9431_cov_54.0264 . mRNA 65 2289 . - . ID=g9588.t1;Parent=g9588;Name=g9588.t1 NODE_1745_length_9431_cov_54.0264 . five_prime_UTR 2243 2289 . - . ID=g9588.t1.utr5p1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . exon 2000 2289 . - . ID=g9588.t1.exon1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . CDS 2000 2242 . - 0 ID=cds.g9588.t1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . exon 1478 1703 . - . ID=g9588.t1.exon2;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . CDS 1478 1703 . - 0 ID=cds.g9588.t1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . exon 1224 1323 . - . ID=g9588.t1.exon3;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . CDS 1224 1323 . - 2 ID=cds.g9588.t1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . exon 840 885 . - . ID=g9588.t1.exon4;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . CDS 840 885 . - 1 ID=cds.g9588.t1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . exon 65 583 . - . ID=g9588.t1.exon5;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . CDS 347 583 . - 0 ID=cds.g9588.t1;Parent=g9588.t1 NODE_1745_length_9431_cov_54.0264 . three_prime_UTR 65 346 . - . ID=g9588.t1.utr3p1;Parent=g9588.t1 #PROT g9588.t1 g9588 MQAMGCVRNAPALRVKAVVSGAVRKASTGATRTLSALAQNKGLFLHVRKIAESEGLGSARLSPRVSVAKLSTSADASRRTLVVGLGNHGLPITHRHSIGMVAVNRLADSLSASWQSARLFDYAQFDAPFAPEGLDGLVLVRPKTFMNLSGGAVAAAVSHFKTTLSRVLIVHDDLERDLSKTSFKAGGSANGHNGIRSICTTFKTQNFPRLRIGIGRPERMDTADYVLSSFDSAEASLVNVVVRRCGEEIVAWHRKLNDPPAPPKKPKSRESPRPNAATSRSEV* # PASA_UPDATE: g9589.t1, single gene model update, valid-1, status:[pasa:asmbl_2506,status:3], valid-1 NODE_1745_length_9431_cov_54.0264 . gene 2659 5606 . + . ID=g9589;Name=g9589.t1 NODE_1745_length_9431_cov_54.0264 . mRNA 2659 5606 . + . ID=g9589.t1;Parent=g9589;Name=g9589.t1 NODE_1745_length_9431_cov_54.0264 . five_prime_UTR 2659 2819 . + . ID=g9589.t1.utr5p1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 2659 2910 . + . ID=g9589.t1.exon1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 2820 2910 . + 0 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 3043 3148 . + . ID=g9589.t1.exon2;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 3043 3148 . + 2 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 3371 3499 . + . ID=g9589.t1.exon3;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 3371 3499 . + 1 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 3847 3940 . + . ID=g9589.t1.exon4;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 3847 3940 . + 1 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 4244 4348 . + . ID=g9589.t1.exon5;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 4244 4348 . + 0 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 4807 4945 . + . ID=g9589.t1.exon6;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 4807 4945 . + 0 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . exon 5247 5606 . + . ID=g9589.t1.exon7;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . CDS 5247 5410 . + 2 ID=cds.g9589.t1;Parent=g9589.t1 NODE_1745_length_9431_cov_54.0264 . three_prime_UTR 5411 5606 . + . ID=g9589.t1.utr3p1;Parent=g9589.t1 #PROT g9589.t1 g9589 MARTAPTLTPHSPSRIEGRQPLHPSADNGAGGGHSRIRSLLLLGVIFGGAAASLQLVLSRFPALEGEDAERFKFPRSLDDAKGLSLVLSRYTDSHFGTVWTGYVFTYVFLQTFAIPGSIFLSFLSGSLFSFPLALFTVCLCSAVGASNCYILSSLVGRGLVERYFPDRVKSWREQLQRHKGELLNYILFLRITPFLPNWFINVASPVIGVPIFHFFVGTFLGVAPPSFVAVNLGRTIHQLTSTSLPLSTVVSLIAVGFVALVPVVFKDSLRKKLQ* # PASA_UPDATE: g9590.t1, single gene model update, valid-1, status:[pasa:asmbl_2503,status:13],[pasa:asmbl_2504,status:12], valid-1 NODE_1745_length_9431_cov_54.0264 . gene 6548 8613 . - . ID=g9590;Name=g9590.t1 NODE_1745_length_9431_cov_54.0264 . mRNA 6548 8613 . - . ID=g9590.t1;Parent=g9590;Name=g9590.t1 NODE_1745_length_9431_cov_54.0264 . five_prime_UTR 8571 8613 . - . ID=g9590.t1.utr5p1;Parent=g9590.t1 NODE_1745_length_9431_cov_54.0264 . exon 6548 8613 . - . ID=g9590.t1.exon1;Parent=g9590.t1 NODE_1745_length_9431_cov_54.0264 . CDS 7059 8570 . - 0 ID=cds.g9590.t1;Parent=g9590.t1 NODE_1745_length_9431_cov_54.0264 . three_prime_UTR 6548 7058 . - . ID=g9590.t1.utr3p1;Parent=g9590.t1 #PROT g9590.t1 g9590 MALSRGDRARCVAIAFVVFLVATVLGFRGAADARPLQQSVNNRVAVTFYVMSKCPDARVCEQTFGPKVAALSSIIDFQFSFIGAANSSEPTGFECMHGQNECTGNIQQLCVDDIAPANATSIPALSFALCQDATQTLIPTNAEDCAAQVGVDYSAITACTSGTRGRELMEASINATTAAGVRASCTVYIEGANFCVHDGDWKSCPLCAAGGDYGQCLADAVCSAYTGSDKPAACEDGAEAMRSTGENSDGSAAALTASVFGSWCEYGAGQSFAAAPYAGATGIADDSCEHWFFARGSSVYRTNYTLAVEAAAVTAIPDALVAAGYNRIGDLDFFAAQLVLPIANEDSRKGSAILVLSASTLAPMGSPVFVSDVALAWVAMDYGSLTLYGGAHDDPVTLLAFDASKGYARLPDVAFAGPIAGDGGAIVGATLLTPGVLYVMSASGGIYSVDITARTSVLALQVSLSEADIAAAAPVGLANMWDVGAGGVLHYATPTMVGNYGFC* # PASA_UPDATE: g13345.t1, single gene model update, valid-1, status:[pasa:asmbl_5900,status:12], valid-1 NODE_3333_length_3709_cov_40.0083 . gene 319 1565 . + . ID=g13345;Name=g13345.t1 NODE_3333_length_3709_cov_40.0083 . mRNA 319 1565 . + . ID=g13345.t1;Parent=g13345;Name=g13345.t1 NODE_3333_length_3709_cov_40.0083 . five_prime_UTR 319 320 . + . ID=g13345.t1.utr5p1;Parent=g13345.t1 NODE_3333_length_3709_cov_40.0083 . exon 319 1565 . + . ID=g13345.t1.exon1;Parent=g13345.t1 NODE_3333_length_3709_cov_40.0083 . CDS 321 1442 . + 0 ID=cds.g13345.t1;Parent=g13345.t1;5_prime_partial=true NODE_3333_length_3709_cov_40.0083 . three_prime_UTR 1443 1565 . + . ID=g13345.t1.utr3p1;Parent=g13345.t1 #PROT g13345.t1 g13345 PNAASRVDALYSSVILTSTPLYEAKSKRGRPNNNDTLTLAGMCLGGGENHLRLSGLSALQTRLVELHRALCNVDISCLSNRHPRSKTEYIRSPLSATVERARVLSSACARDLLGLSLIVPLAPGEPPGTTHQRRSRVAMQGESALDRDDPDLSLIGSLFRGADGQSLPDVDTLLSRLPPFARDKKSGRNTLDAFVRTADHVLQGVAAERDVYKAALEDRRRILRVIDECRETGAQDHQQRPQQAQGADVVSQDISLRSLAREKLAACRAVAKELSDAFEDMKTEQNDRTLKRFVGLFRENIGLLMEHSSHVDFDDDGAPRNGGVSCRRDVRHENPGLSGQFERIDSVGLDRVLAAIERRDEILARMIDSTDRH* # PASA_UPDATE: g12667.t1, single gene model update, valid-1, status:[pasa:asmbl_6441,status:3], valid-1 NODE_370_length_25690_cov_38.9353 . gene 632 6334 . - . ID=g12667;Name=g12667.t1 NODE_370_length_25690_cov_38.9353 . mRNA 632 6334 . - . ID=g12667.t1;Parent=g12667;Name=g12667.t1 NODE_370_length_25690_cov_38.9353 . five_prime_UTR 6061 6334 . - . ID=g12667.t1.utr5p1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 6049 6334 . - . ID=g12667.t1.exon1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 6049 6060 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 5410 5674 . - . ID=g12667.t1.exon2;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 5410 5674 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 5058 5172 . - . ID=g12667.t1.exon3;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 5058 5172 . - 2 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 4696 4849 . - . ID=g12667.t1.exon4;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 4696 4849 . - 1 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 4003 4416 . - . ID=g12667.t1.exon5;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 4003 4416 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 3612 3801 . - . ID=g12667.t1.exon6;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 3612 3801 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 3219 3431 . - . ID=g12667.t1.exon7;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 3219 3431 . - 2 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 2844 2932 . - . ID=g12667.t1.exon8;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 2844 2932 . - 2 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 2425 2628 . - . ID=g12667.t1.exon9;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 2425 2628 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 2126 2195 . - . ID=g12667.t1.exon10;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 2126 2195 . - 0 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 1522 1836 . - . ID=g12667.t1.exon11;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 1522 1836 . - 2 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . exon 632 1365 . - . ID=g12667.t1.exon12;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . CDS 1025 1365 . - 2 ID=cds.g12667.t1;Parent=g12667.t1 NODE_370_length_25690_cov_38.9353 . three_prime_UTR 632 1024 . - . ID=g12667.t1.utr3p1;Parent=g12667.t1 #PROT g12667.t1 g12667 MSTVSYGGVVRQRHGTPDGIPGPYLHDLNSNSYPSTSPTTPTQTEGIGSNAHVTEGRMARPDAGLYDRYADKDGVDSLDSPRVSEVRPIQFKDIVAWYAYKMGTHGIVFVVLTVLSFVFHFAWLSEPPSVVWDETHFGKFANGYIKGNFFFDVHPPLGKMLIGLAGYLTGYDGQFEFKEPGQQYGETRYMGMRVFCSLMGAALCPLMYLTVRELTNAPTSAALAASLLLFDTGILTLTRYILLDSPLLLFVLCAVFCSAKFASCHDAPFTRRWWTWLTLTGASLACAFSVKWVGLFIIAYVGLVTIADLWDLLGDLSLTKRVLFDHFVARALCLIAIPAVIYMSCFYIHFWALPRSGPGDGFMSTAFQTTLEGNELYGLTVPEEIAYGSIISLKNRRSSGGLLHSHAHLYPDGVGARQQQITAYQHKDSNNHWLVKRATGERPQDDAAPQHIKHGDIVRLEHVNTRRNLHGHREKAPITTRHFQVTGYGNEGIGDTNDQWRVEVVNLPKDHEGKGSHVRVVHSVIRLVHVNIGCALHSHGKNLPKWGFEQLEVSCNPSVSDSDNLWNVEAHINPKLPSGKPVSFRPSFFSSFYELHVAMAEVNNGLKPKEGEVTSRPWMWPIDYRGQRFTGWGEKDHRVYLLGNPIVWYFCLGVMGLFVAFLGLHALMVQRGFLEPSWNKERKRRLVWNGVWLLVGWALHYLPFFLMGRVLYFHHYFPALLFSFMLTGIAVDYLLTTIRQWLGHKRRYVYYALNAVLYAGIAASFVWFRHVTFGMTGPHSQYQHTKLLSSWEF* # PASA_UPDATE: g12674.t1, single gene model update, valid-1, status:[pasa:asmbl_6444,status:12], valid-1 NODE_370_length_25690_cov_38.9353 . gene 22843 25498 . - . ID=g12674;Name=g12674.t1 NODE_370_length_25690_cov_38.9353 . mRNA 22843 25498 . - . ID=g12674.t1;Parent=g12674;Name=g12674.t1 NODE_370_length_25690_cov_38.9353 . exon 25099 25498 . - . ID=g12674.t1.exon1;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . CDS 25099 25498 . - 0 ID=cds.g12674.t1;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . exon 24595 24872 . - . ID=g12674.t1.exon2;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . CDS 24595 24872 . - 2 ID=cds.g12674.t1;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . exon 23725 24285 . - . ID=g12674.t1.exon3;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . CDS 23725 24285 . - 0 ID=cds.g12674.t1;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . exon 22843 23507 . - . ID=g12674.t1.exon4;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . CDS 23109 23507 . - 0 ID=cds.g12674.t1;Parent=g12674.t1 NODE_370_length_25690_cov_38.9353 . three_prime_UTR 22843 23108 . - . ID=g12674.t1.utr3p1;Parent=g12674.t1 #PROT g12674.t1 g12674 MRICTRHKLLTNSLSTHAVKQTPYAGAYRFAISCDDHCELWVSKSASPKDEEKLAFVGTTAESRGEEWSQENDWSKYPSQQSVEVIMEAGKRYYVEVLHKQLGGGEHVEVAWKQPGSSGFEIIAGNNLSPYVDESGLAQGAVVADDDGHGHSPDDLPPSHSHRTGDQSGGQISAPPADERDHFHLVPLLDDAETSNILPECEYAPSYIMHRPLRRYEGVNLVRESEVYPDDHTSLKDGNNIHPGNRPVHQSAAEDVVNKFMAALNAKRVAADKFSLEKIVNVERKNDPGKGERFLVELDLTRPSEATKKIRVSEYVYRPQGQDALCSPRNFKWDKHAMVHVIVPVKNQGVWLQHFIDDMSAIYGNTKDPHFNVIVVDFGSTDIDVDAAFARSGLKQYKVIHRTGNFERAGGIQAGIDFVTNPNDIIFTCDLHLEIPDSLIEGCRKHTIKGIQAYAPLVVRLACGFTPETPSGFWESAGYGLFALYKSDFDRIGGMNTREFRDRWGGEDWECVDRVLGNGLEIERLRLPKFYHYYHSRKGMWGSKA* # PASA_UPDATE: g12671.t1, single gene model update, valid-1, status:[pasa:asmbl_6445,status:3], valid-1 NODE_370_length_25690_cov_38.9353 . gene 14697 17063 . + . ID=g12671;Name=g12671.t1 NODE_370_length_25690_cov_38.9353 . mRNA 14697 17063 . + . ID=g12671.t1;Parent=g12671;Name=g12671.t1 NODE_370_length_25690_cov_38.9353 . five_prime_UTR 14697 15057 . + . ID=g12671.t1.utr5p1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . exon 14697 15136 . + . ID=g12671.t1.exon1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . CDS 15058 15136 . + 0 ID=cds.g12671.t1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . exon 15583 15921 . + . ID=g12671.t1.exon2;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . CDS 15583 15921 . + 2 ID=cds.g12671.t1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . exon 16148 16294 . + . ID=g12671.t1.exon3;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . CDS 16148 16294 . + 2 ID=cds.g12671.t1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . exon 16615 17063 . + . ID=g12671.t1.exon4;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . CDS 16615 16694 . + 2 ID=cds.g12671.t1;Parent=g12671.t1 NODE_370_length_25690_cov_38.9353 . three_prime_UTR 16695 17063 . + . ID=g12671.t1.utr3p1;Parent=g12671.t1 #PROT g12671.t1 g12671 MAFRQPQGMTILRDENANVANVGDAMAGKGGQQRAAFGPRKALGDVSNRTHSGQPPTGPVKGNASQPQQPIKPLQQQNKPKGLSVRPDAPADGKGAKKEASTKRAIAMEIHSEMGFAMPTVSAAAFDDIEYMPPTPMDRAEYSDILGSYSHLRGSMMPAPSLLGAPYSVSSILDEPLVDPMPYDSMANERLVTCVDLPSLSLDIPIGQPFELDY* # PASA_UPDATE: g12672.t1_g12673.t1, single gene model update, valid-1, status:[pasa:asmbl_6443,status:3], valid-1 NODE_370_length_25690_cov_38.9353 . gene 17272 21586 . - . ID=g12672_g12673;Name=MERGED%3A%20g12672.t1 NODE_370_length_25690_cov_38.9353 . mRNA 17272 21586 . - . ID=g12672.t1_g12673.t1;Parent=g12672_g12673;Name=MERGED%3A%20g12672.t1 NODE_370_length_25690_cov_38.9353 . five_prime_UTR 21249 21586 . - . ID=g12672.t1_g12673.t1.utr5p1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 21155 21586 . - . ID=g12672.t1_g12673.t1.exon1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 21155 21248 . - 0 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 20797 20884 . - . ID=g12672.t1_g12673.t1.exon2;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 20797 20884 . - 2 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 20407 20462 . - . ID=g12672.t1_g12673.t1.exon3;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 20407 20462 . - 1 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 20116 20267 . - . ID=g12672.t1_g12673.t1.exon4;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 20116 20267 . - 2 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 19660 19756 . - . ID=g12672.t1_g12673.t1.exon5;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 19660 19756 . - 0 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 19320 19424 . - . ID=g12672.t1_g12673.t1.exon6;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 19320 19424 . - 2 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 18961 19025 . - . ID=g12672.t1_g12673.t1.exon7;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 18961 19025 . - 2 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 18611 18683 . - . ID=g12672.t1_g12673.t1.exon8;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 18611 18683 . - 0 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 18162 18355 . - . ID=g12672.t1_g12673.t1.exon9;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 18162 18355 . - 2 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . exon 17272 17936 . - . ID=g12672.t1_g12673.t1.exon10;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . CDS 17850 17936 . - 0 ID=cds.g12672.t1_g12673.t1;Parent=g12672.t1_g12673.t1 NODE_370_length_25690_cov_38.9353 . three_prime_UTR 17272 17849 . - . ID=g12672.t1_g12673.t1.utr3p1;Parent=g12672.t1_g12673.t1 #PROT g12672.t1_g12673.t1 g12672_g12673 MAPTAQGNESDTDVVMQPAEEDREYSENSDNGEDSDPAERRRVVDERMAALRKEFVSVKDKYYLDKAQKIDSEIAQLQNGDHSELKRRLEGLEKSRSERIRIAELYRKFQMENITNQFASEKKEAETEFTNKKKEAADELLQELIERKRKLEDEKNNVDIAGEIPEGRAAATRAKLRRRQNETEKPAEKRRKPVTISGPHIVYQLTEQEIADDIVAMKKVVTGGASSARESKSTSSNTSRRKEVPPPPVALPPPASIGADETIMYEVNHTDGQIKYDGRTFEKGNLIFFEGKDTPRTSGVITAINSGEVWVRKDDGGKTKLYISQLRLGKYILRHK* # PASA_UPDATE: g12669.t1, single gene model update, valid-1, status:[pasa:asmbl_6440,status:13],[pasa:asmbl_6442,status:12], valid-1 NODE_370_length_25690_cov_38.9353 . gene 9646 10952 . - . ID=g12669;Name=g12669.t1 NODE_370_length_25690_cov_38.9353 . mRNA 9646 10952 . - . ID=g12669.t1;Parent=g12669;Name=g12669.t1 NODE_370_length_25690_cov_38.9353 . five_prime_UTR 10836 10952 . - . ID=g12669.t1.utr5p1;Parent=g12669.t1 NODE_370_length_25690_cov_38.9353 . exon 10777 10952 . - . ID=g12669.t1.exon1;Parent=g12669.t1 NODE_370_length_25690_cov_38.9353 . CDS 10777 10835 . - 0 ID=cds.g12669.t1;Parent=g12669.t1 NODE_370_length_25690_cov_38.9353 . exon 9646 10557 . - . ID=g12669.t1.exon2;Parent=g12669.t1 NODE_370_length_25690_cov_38.9353 . CDS 10002 10557 . - 1 ID=cds.g12669.t1;Parent=g12669.t1 NODE_370_length_25690_cov_38.9353 . three_prime_UTR 9646 10001 . - . ID=g12669.t1.utr3p1;Parent=g12669.t1 #PROT g12669.t1 g12669 MQSRLLSAFSTLALRSTLARNFTVETMAKTAVAGKQKRAKKPKDAPKRAMSAFMFYANDVRPQVRQKQPGLKITEVATLIGKMWAQVSDKQREKYEEKAREDKDRYQREMQTYVPPPTEKGKGGRRKKDPSAPKRAMSGFMYYANDIRPKLQKAHPELKITEIASKIGVLWKTLTDKDKIPFAKLAAADKARYDEEMSAYRETQ* # ORIGINAL: g12670.t1 original gene structure, not modified by PASA NODE_370_length_25690_cov_38.9353 AUGUSTUS gene 12267 14445 . + . ID=g12670;Name=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS mRNA 12267 14445 . + . ID=g12670.t1;Parent=g12670;Name=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 12267 13030 . + . ID=g12670.t1.exon1;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 12267 13030 . + 0 ID=cds.g12670.t1;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 13311 13380 . + . ID=g12670.t1.exon2;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 13311 13380 . + 1 ID=cds.g12670.t1;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 13562 13654 . + . ID=g12670.t1.exon3;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 13562 13654 . + 0 ID=cds.g12670.t1;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 13855 14445 . + . ID=g12670.t1.exon4;Parent=g12670.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 13855 14445 . + 0 ID=cds.g12670.t1;Parent=g12670.t1 #PROT g12670.t1 g12670 MCFFCTSEDGVGHVNFRNEDALRAITRALLLDYYSLDVCLPPNRLVPTVTLRANYIHWIEDLVTELRGDVTLPTNVIGIDIGTGASCIYPLLGARIASFDFVATEIDSISFDSAVKNVEHNKLIDRIAVVKANPEDPIVDTALAARPDIRFDFLMCNPPFFDVAEWEYMAKTHPGIAAVSDLIDEDINNSTGERESVGETASAVGAPKRRRPNFQRKPALSASTGTECEMATEGGELGFVGRIVSESLVSRGRVRWYTSMLGKKATRKHILRQLRESGVPTIRTATFFQGRTLRWAVAWSFEECPSPVKGKEAPPTDMGHATKRPRKASHAMSVTIPSHIDSVRIRECTLSALHSLGVTVMQSSTNEPTYIASFEAVSDTWSHQRKRRRQQHYVTSGTTEEPVCIQERGVDVRLAVQNDEDTVPVQPESLPSLSAIGCRQSEAPLFRGFVSVAPGVTGNDVCDPAASAIAPSAHTLVLVMDGDRPGNKEQFNNFVRVLQNALNKI* # ORIGINAL: g12668.t1 original gene structure, not modified by PASA NODE_370_length_25690_cov_38.9353 AUGUSTUS gene 7408 9423 . + . ID=g12668;Name=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS mRNA 7408 9423 . + . ID=g12668.t1;Parent=g12668;Name=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 7408 7524 . + . ID=g12668.t1.exon1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 7408 7524 . + 0 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 7643 7750 . + . ID=g12668.t1.exon2;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 7643 7750 . + 0 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 7933 8040 . + . ID=g12668.t1.exon3;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 7933 8040 . + 0 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 8228 8276 . + . ID=g12668.t1.exon4;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 8228 8276 . + 0 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 8420 8654 . + . ID=g12668.t1.exon5;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 8420 8654 . + 2 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 8879 9001 . + . ID=g12668.t1.exon6;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 8879 9001 . + 1 ID=cds.g12668.t1;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS exon 9249 9423 . + . ID=g12668.t1.exon7;Parent=g12668.t1 NODE_370_length_25690_cov_38.9353 AUGUSTUS CDS 9249 9423 . + 1 ID=cds.g12668.t1;Parent=g12668.t1 #PROT g12668.t1 g12668 MESPVFMNHLLAAAIAVSRRSGALIRDVLKGGNLGTVNKALTEIDPQTEADRRSQMCIVKSLRKRWPDLNIIGEEDNLVDTDEYTVDLQDASESPLEYACPEKWRAIKPSDAVVWVDPLDGTREFTDGFHENVTVLIGIAVGGRPVAGVIHQPFFQSGDGSDAGRSVWGLVGLGTFGFIAPAVRADNRVIATTRTHLSKEVEDAVSAIAPKEHIMIGGAGNKFIRILEGNIDAYIYPRAGTSKWDSCAGEAILSAIGGDLTDRNGDHYDYSADADRGNKLGVVATLGDHESYMRHIRPLFANKA* # PASA_UPDATE: g5318.t1, single gene model update, valid-1, status:[pasa:asmbl_8158,status:12], valid-1 NODE_556_length_21302_cov_38.1837 . gene 4594 6406 . + . ID=g5318;Name=g5318.t1 NODE_556_length_21302_cov_38.1837 . mRNA 4594 6406 . + . ID=g5318.t1;Parent=g5318;Name=g5318.t1 NODE_556_length_21302_cov_38.1837 . exon 4594 4895 . + . ID=g5318.t1.exon1;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . CDS 4594 4895 . + 0 ID=cds.g5318.t1;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . exon 5044 5158 . + . ID=g5318.t1.exon2;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . CDS 5044 5158 . + 1 ID=cds.g5318.t1;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . exon 5322 6406 . + . ID=g5318.t1.exon3;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . CDS 5322 6185 . + 0 ID=cds.g5318.t1;Parent=g5318.t1 NODE_556_length_21302_cov_38.1837 . three_prime_UTR 6186 6406 . + . ID=g5318.t1.utr3p1;Parent=g5318.t1 #PROT g5318.t1 g5318 MALSRLPLFIVVLAVAILHVRGQAPEQLHLSLTEKTGEMSVMWVSMRTIDTEADANSHCNYGTVSGDLVSGASAEYHTYADGGFNGTIHRAVLGNLKPATRYYYVCGSEKFGYSAEISFVSAPAPGSSDAVKIVTFGDMGVRNSDYTVASLASDVLSDGYTLAVSVGDSSYADDTLFGNSRVNDAFFNKIQPFAASAPFQLCDGNHEVQYDYAAFLNRTRMPVVGSGPLSRFYHSFDYGPIHFVLFSTETVHMDSLAPGGEQRVFIEADLAAADANRANVPWIVAISHHPMYCTDLLLFNRCLWEAAAYRDMLEGVFNRYKVDVYASGHNHQYERSFPVFNSTVVTSYENAPYTVHIVNGAAGNPEGNDPTWDPTSKIRAFHGSGFDTGYLRMNVNRTAIAWEFVDANKKKAVDAFTMTKPDPLVA* # ORIGINAL: g5317.t1 original gene structure, not modified by PASA NODE_556_length_21302_cov_38.1837 AUGUSTUS gene 1463 3156 . - . ID=g5317;Name=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS mRNA 1463 3156 . - . ID=g5317.t1;Parent=g5317;Name=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 2998 3156 . - . ID=g5317.t1.exon1;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 2998 3156 . - 0 ID=cds.g5317.t1;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 2581 2747 . - . ID=g5317.t1.exon2;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 2581 2747 . - 0 ID=cds.g5317.t1;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 2068 2439 . - . ID=g5317.t1.exon3;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 2068 2439 . - 1 ID=cds.g5317.t1;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 1463 1853 . - . ID=g5317.t1.exon4;Parent=g5317.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 1463 1853 . - 1 ID=cds.g5317.t1;Parent=g5317.t1 #PROT g5317.t1 g5317 MEPANDGSAAARKNMVELWGNEKTMNMNPVLHSSILASPYFRNDLYSFKTYHEVIDEIYNRVDHLEPILPGGDNHPSSAFCLLYKLFTLRLTEKQLKGILNHADSPYIRALGFLYLRFATPPKGLWDRFESFMMDPEPIKVRWDKHAPKVSMGQFVRELITDTKFINTMLPRIPVPVHKELLEKLKTKGLAPKADERAVGHAGTMLNGVPEAEGEDGANDDDNHAVEEGDSKSKRSHSASPKRRSSRSRSRSHDRRDRDRSRERRRSDSKDRSRGRSHSRSRDRRRRSRSHERSRGRSRSRSRSRERARDSRRRSRSRSRGRHERDSRDRDRDRDRDERPVRRDYSDRDEREGRQSGSRDRR* # PASA_UPDATE: g5320.t1, single gene model update, valid-1, status:[pasa:asmbl_8160,status:3], valid-1 # PASA_UPDATE: g5320.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8159,status:12], valid-1 NODE_556_length_21302_cov_38.1837 . gene 16796 21299 . + . ID=g5320;Name=g5320.t1 NODE_556_length_21302_cov_38.1837 . mRNA 16796 21299 . + . ID=g5320.t1;Parent=g5320;Name=g5320.t1 NODE_556_length_21302_cov_38.1837 . five_prime_UTR 16796 16969 . + . ID=g5320.t1.utr5p1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 16796 17048 . + . ID=g5320.t1.exon1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 16970 17048 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 17242 17411 . + . ID=g5320.t1.exon2;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 17242 17411 . + 2 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 17648 17719 . + . ID=g5320.t1.exon3;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 17648 17719 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 18074 18218 . + . ID=g5320.t1.exon4;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 18074 18218 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 18472 18590 . + . ID=g5320.t1.exon5;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 18472 18590 . + 2 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 18852 19183 . + . ID=g5320.t1.exon6;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 18852 19183 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 19334 19415 . + . ID=g5320.t1.exon7;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 19334 19415 . + 1 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 19587 19674 . + . ID=g5320.t1.exon8;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 19587 19674 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 19876 20001 . + . ID=g5320.t1.exon9;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 19876 20001 . + 2 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 20202 20295 . + . ID=g5320.t1.exon10;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 20202 20295 . + 2 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 20463 20541 . + . ID=g5320.t1.exon11;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 20463 20541 . + 1 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . exon 20804 21299 . + . ID=g5320.t1.exon12;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . CDS 20804 20860 . + 0 ID=cds.g5320.t1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . three_prime_UTR 20861 21299 . + . ID=g5320.t1.utr3p1;Parent=g5320.t1 NODE_556_length_21302_cov_38.1837 . mRNA 16796 20701 . + . ID=g5320.t1.1.5b6be70c;Parent=g5320;Name=g5320.t1 NODE_556_length_21302_cov_38.1837 . five_prime_UTR 16796 16969 . + . ID=g5320.t1.1.5b6be70c.utr5p1;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 16796 17048 . + . ID=g5320.t1.1.5b6be70c.exon1;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 16970 17048 . + 0 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 17242 17411 . + . ID=g5320.t1.1.5b6be70c.exon2;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 17242 17411 . + 2 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 17648 17719 . + . ID=g5320.t1.1.5b6be70c.exon3;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 17648 17719 . + 0 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 18074 18218 . + . ID=g5320.t1.1.5b6be70c.exon4;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 18074 18218 . + 0 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 18472 18590 . + . ID=g5320.t1.1.5b6be70c.exon5;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 18472 18590 . + 2 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 18852 19183 . + . ID=g5320.t1.1.5b6be70c.exon6;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 18852 19183 . + 0 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 19334 19415 . + . ID=g5320.t1.1.5b6be70c.exon7;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 19334 19415 . + 1 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 19587 19674 . + . ID=g5320.t1.1.5b6be70c.exon8;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 19587 19674 . + 0 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 19876 20001 . + . ID=g5320.t1.1.5b6be70c.exon9;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 19876 20001 . + 2 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 20202 20295 . + . ID=g5320.t1.1.5b6be70c.exon10;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 20202 20295 . + 2 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . exon 20463 20701 . + . ID=g5320.t1.1.5b6be70c.exon11;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . CDS 20463 20574 . + 1 ID=cds.g5320.t1.1.5b6be70c;Parent=g5320.t1.1.5b6be70c NODE_556_length_21302_cov_38.1837 . three_prime_UTR 20575 20701 . + . ID=g5320.t1.1.5b6be70c.utr3p1;Parent=g5320.t1.1.5b6be70c #PROT g5320.t1 g5320 MGKDVVTEEDKAQAEAFKEKGNKLFQERRFDKAVEEYTKAIIVNPDIPAYYANRAFAYIKVESYGYALEDSSKAIDMDKTYIKAYYRRASANMALGKFKESLRDLKTVVKFAPNDHDANIKLKECEKIVKRIAFEKAIATEDKKTSIDPMEIEAMAVESDYDGPHLGENITVEFVTGLLEHYRREKKLHRKYAFKILIKARELMMNLPSLVDVSFPEGGKFTLCGDIHGQFYDLLNIFKINGLPSKENPYMFNGDFVDRGSFSVECIFTLLSFKLLYPNHFFMNRGNHESDNMNKMYGFDGETKHKYNEKMVSIFHEVFNWLPLAHCINKRVLVMHGGLFSDDNVVLDDIRRFDRFREPPESGIMCELLWSDPQPQLGRAPSKRGVGIHFGPDITKRFCEKNGLDYIVRSHEVKDKGYEEAHDGRCITVFSAPNYCDQMGNKGAFITMTSDMKPNFTSFDAVPHPNVRPMAYAGNFGMFM* #PROT g5320.t1.1.5b6be70c g5320 MGKDVVTEEDKAQAEAFKEKGNKLFQERRFDKAVEEYTKAIIVNPDIPAYYANRAFAYIKVESYGYALEDSSKAIDMDKTYIKAYYRRASANMALGKFKESLRDLKTVVKFAPNDHDANIKLKECEKIVKRIAFEKAIATEDKKTSIDPMEIEAMAVESDYDGPHLGENITVEFVTGLLEHYRREKKLHRKYAFKILIKARELMMNLPSLVDVSFPEGGKFTLCGDIHGQFYDLLNIFKINGLPSKENPYMFNGDFVDRGSFSVECIFTLLSFKLLYPNHFFMNRGNHESDNMNKMYGFDGETKHKYNEKMVSIFHEVFNWLPLAHCINKRVLVMHGGLFSDDNVVLDDIRRFDRFREPPESGIMCELLWSDPQPQLGRAPSKRGVGIHFGPDITKRFCEKNGLDYIVRSHEVKDKGYEEAHDGRCITVFSAPNYCDQMGNKGAFITMTSDMKPNFTSFDAVVREQSLAPTQ* # PASA_UPDATE: g5316.t1, single gene model update, valid-1, status:[pasa:asmbl_8157,status:12], valid-1 NODE_556_length_21302_cov_38.1837 . gene 161 1177 . + . ID=g5316;Name=g5316.t1 NODE_556_length_21302_cov_38.1837 . mRNA 161 1177 . + . ID=g5316.t1;Parent=g5316;Name=g5316.t1 NODE_556_length_21302_cov_38.1837 . five_prime_UTR 161 161 . + . ID=g5316.t1.utr5p1;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . exon 161 312 . + . ID=g5316.t1.exon1;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . CDS 162 312 . + 0 ID=cds.g5316.t1;Parent=g5316.t1;5_prime_partial=true NODE_556_length_21302_cov_38.1837 . exon 611 746 . + . ID=g5316.t1.exon2;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . CDS 611 746 . + 2 ID=cds.g5316.t1;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . exon 946 1177 . + . ID=g5316.t1.exon3;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . CDS 946 1108 . + 1 ID=cds.g5316.t1;Parent=g5316.t1 NODE_556_length_21302_cov_38.1837 . three_prime_UTR 1109 1177 . + . ID=g5316.t1.utr3p1;Parent=g5316.t1 #PROT g5316.t1 g5316 VVAPFIDMIFLGSGLTCMLVYVWGRRNRHVRMSFLGLLTFTAPYLPWVLLGFSVLLNSSPLGDLLGIGIGHIYYYFEDVYPTLFPGRRPLKTPAIIKWLFEGAPRQASAEPPAGENEDEQRRPGGFRWGEGQRLGDEDQIAANGANGAH* # ORIGINAL: g5319.t1 original gene structure, not modified by PASA NODE_556_length_21302_cov_38.1837 AUGUSTUS gene 6862 16023 . - . ID=g5319;Name=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS mRNA 6862 16023 . - . ID=g5319.t1;Parent=g5319;Name=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 15942 16023 . - . ID=g5319.t1.exon1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 15942 16023 . - 0 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 15725 15812 . - . ID=g5319.t1.exon2;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 15725 15812 . - 2 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 13649 15319 . - . ID=g5319.t1.exon3;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 13649 15319 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 13356 13439 . - . ID=g5319.t1.exon4;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 13356 13439 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 12977 13069 . - . ID=g5319.t1.exon5;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 12977 13069 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 12665 12730 . - . ID=g5319.t1.exon6;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 12665 12730 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 12213 12301 . - . ID=g5319.t1.exon7;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 12213 12301 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 11746 11935 . - . ID=g5319.t1.exon8;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 11746 11935 . - 2 ID=cds.g5319.t1;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS exon 6862 11533 . - . ID=g5319.t1.exon9;Parent=g5319.t1 NODE_556_length_21302_cov_38.1837 AUGUSTUS CDS 6862 11533 . - 1 ID=cds.g5319.t1;Parent=g5319.t1 #PROT g5319.t1 g5319 MALSAAQRAQGPPRLKLWIHENNFYKNEEELVLNQDVVPNIKAGEILELFHPDKDETHTRPTRDFNCNVHVLCCITCLSRPPHLNQRLDVFISSQFFFPLHPFNYTASGGQISIDRTIADVFRLQNRGEIIVQRADPELISLDLVELYFKDQYIGRSDMWRLKATLMNSCAYPTKKVTFAGIRAQVAELWTAGRRVSSGLISERTKIVFRSCSAQLYIFLQMSAEMWEFSLDGDLHCERLVDGFLHELFARWKDLKCNHDVSVVLFSRTYYDSYTLSDFAPERHVTLLQDHNGQVFEDFYTVAIHHETRADWSTALVQLKREIARYPSTINCLQNSSATRGEPRGRNSSAIRANFLEAINLALNAFDRHFIDRNFERTGQMIVVVSPGAGAYEVDSDLTHVTKQRMMDSGIGCDLVCLSKPPIHIAPVFRFKRSDLNLAPGQSHYNIPHWINASYYGAMGADDDGDTEEDEGAALADAEQKRLHAMAGQPSPRDFPAAFRVPQKFSPVCRLDDRAPTGVFGAADCNDADSVADISPLVALARAQDRTVIGMEGLRRPSALDRIPAVQLERAATPSSAGMSSPTADMHGSFFTPPPQQVPSNASTPTASVQGTFRVTYDTYDAALFTGEMTQPMRQKRIRRVSGSEVNLPTVASVGSISRSLEQRTGANYLDARFGKDDVSERPTMESTSLDERSDLFPPHFDRRRDLDTSSVITDRSPAKKDSAANIDRSANLDVPSKRRSLIGQFGQSFDQSQPQSILPISTMSRFVRTNSMPHGNGDGSKNGSPVGSLYESEYGDDISTFTRGSPTTTNNNYTNNNNNNINNDPSTTRRRVSRTQSIESGRAGPASASRGALANPSSNRLGAGSASGFSNTTGEGGELLRNINPFKPSAAHMSEARISSNRRRWSHIFPVGNGKQMLEPNWRSLSTPGSLPLTTDYFPNSVDLNREYFEYTYSLSLDDDDRDSNIYGNRTEAVLKELVSQRLAQGFQIIVSSALDSTQNDSSVFGMDGADGNGASSTSSGLKQALSGGRTGSSVGVGGSAPHGQRDSGALGTPMLSAGSSMAGPRTSPGGGSGGSDAGPAGAARLAGGSAAVVMGFAAGGLMSGAGRATGATTAYYLSMGQTFHKLVFDPRARNIEVRRYMRRYRPQSKSLPYRYVLRAPLQQDPQTVAVEFRQQPVGDYNWNYLDQIICGYYADLIDSLRYWRARFVLLPMPATKKAPSLTRAETVHGAMPLSGASDSGTAQQSSAVTSPLPDNVAEQEEEEARIANFAKFLGILNKLKAATQPRGKDDLGVNIVGKDGTVPRDGTQPQASSSQQQQQQQQQQQQQQQQQQRDKERERDRESVLSLGAKEASKDAGSGTVQGQLQQQFPAAEPISKDADIALVVAAMQHRFYGVAVEDRRWHLRTYKNCFIGKECVDWMLKRVTDLKTREDAVALGRAIMGAGFIDHVTKAHPFQDAMLFYVFKNVKTPKKTALASSPVGSAALSQSQQLQQQQVQQQQTQTQQTQQQSQQQQQLQQQQQQQQPSNTDAPIRQGPPVGSPQNSTGAGIPPPTISVGVPSAQSGASSQQQAQSSQQQIPPPASSQVPSDGRLSDVLGPLPSKRDASSSAPATASMTATPRDSAPPAMPLKFGADGMEAGMGEFSVSINRNRTSQSVVAVVAAVASGTKNVGLADAAAAMARAAAASQRGAAAGVLPLPSTLVGQASSGPQSASSAGSTQRESASTSEWPDRRRSLAALVSQHSTGDPEKPVALTRSLLLDIDPSKKSDRREWLVVHYDAFYDPSRGHHLEVHWLVSTGCIVEELVATWSRKAAQCSFIMVPVPCDQAQPDKPECDPFRAHIHVPLAWWPDKSRHSEAASGAPSGTDGALVPVYPFSPGLPPTSPQQQAYGRQQIGGGGGGTDTGGRFFGAYTRQFSSPGMRVSSNMASQGYSHHSDSVGSTTSTSGGLASLFPSRRHYFEEALLARFDFMLDTESDLEIENAFEESGRRMVFSYRRPEFRHPQYIHRTGAALVQVLDGGAGFLFTSNPLMTNKWRTVAGIDAGVGSRILNQLRDFCASATELEGFWTATVERGKRRRQPSQGAASAPPLSSLADKRSSSAPLGPSVEPVEGKYGDLQELVTEMEARMPKHSPSTSSDVGAVGDTSMITGDAKDVSATAAAADHGPATPASPLATKEVGSGVLAEPNSSDSAIRVGRFEIVPEVADTSGRGSVDIVDSTSTAMPADAPSHVPFAQSLRGSPGLFRSYAQSSIAPHAADGDSSSDAGASRDSVTATKTPVNESSHDAKPKKSSSSTVLGQERGMDDYVSGFVGEGNTATRIAYYLLAAQADPMSMLDAFARRGR* # ORIGINAL: g12179.t1 original gene structure, not modified by PASA NODE_1385_length_11648_cov_41.4901 AUGUSTUS gene 1182 1529 . - . ID=g12179;Name=g12179.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS mRNA 1182 1529 . - . ID=g12179.t1;Parent=g12179;Name=g12179.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 1182 1529 . - . ID=g12179.t1.exon1;Parent=g12179.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 1182 1529 . - 0 ID=cds.g12179.t1;Parent=g12179.t1 #PROT g12179.t1 g12179 MEPSSEHNVNRAQDRLAGDTGAEVDKFDSATQGQGHYSQTEAFRINSMGTHHGPAIEQHVLEAHLAPDEWQQEHQKRGGKTLSLGLDVARDPTLNPKDPNTHRMLQSEIENKKRH* # ORIGINAL: g12181.t1 original gene structure, not modified by PASA NODE_1385_length_11648_cov_41.4901 AUGUSTUS gene 4950 7159 . - . ID=g12181;Name=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS mRNA 4950 7159 . - . ID=g12181.t1;Parent=g12181;Name=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 6691 7159 . - . ID=g12181.t1.exon1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 6691 7159 . - 0 ID=cds.g12181.t1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 6224 6357 . - . ID=g12181.t1.exon2;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 6224 6357 . - 2 ID=cds.g12181.t1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 5793 6096 . - . ID=g12181.t1.exon3;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 5793 6096 . - 0 ID=cds.g12181.t1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 5545 5687 . - . ID=g12181.t1.exon4;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 5545 5687 . - 2 ID=cds.g12181.t1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 5321 5387 . - . ID=g12181.t1.exon5;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 5321 5387 . - 0 ID=cds.g12181.t1;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 4950 5167 . - . ID=g12181.t1.exon6;Parent=g12181.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 4950 5167 . - 2 ID=cds.g12181.t1;Parent=g12181.t1 #PROT g12181.t1 g12181 MHTSLRVYRLLAGSVHGRLFRARQLSTAHHHANPATVSSKANASTANPAFRPLPHASAHFVRPPTASFAAANAARDTLASMAAAPWNLFTGMFSWYWPTSDAQLEKAEKAVLDAYVKSPHKVYQVPIGNGASINTISFGAHAENPENVTMVMTHGFGSGMAFWYRNFDAFARAPYVNLHAVDWLGMGRSSRPPFSAQTPEEAEAFFVDSLEQWRQEMKIDRFVLLGHSLGGFLSAAYALKHPERVIRLILVSPVGIPKRPDESPADAAPAQARAEPWFLKAVRTAWGYNITPQSIVRTAGRLGPDLVKRIVRGRFSTMTDGEAQLLGEYAYHISAARASGELAFNTILSFGAFARRPLCDRLHELKVPATFIYGSRDWMDHRAAEAAQRSMTVESKVVRIPDGGHHMYIDNPIDFERSVLLELAKERARADRQRRDSDSRTGGR* # ORIGINAL: g12182.t1 original gene structure, not modified by PASA NODE_1385_length_11648_cov_41.4901 AUGUSTUS gene 7706 9278 . - . ID=g12182;Name=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS mRNA 7706 9278 . - . ID=g12182.t1;Parent=g12182;Name=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 8533 9278 . - . ID=g12182.t1.exon1;Parent=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 8533 9278 . - 0 ID=cds.g12182.t1;Parent=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 8097 8420 . - . ID=g12182.t1.exon2;Parent=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 8097 8420 . - 1 ID=cds.g12182.t1;Parent=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS exon 7706 7916 . - . ID=g12182.t1.exon3;Parent=g12182.t1 NODE_1385_length_11648_cov_41.4901 AUGUSTUS CDS 7706 7916 . - 1 ID=cds.g12182.t1;Parent=g12182.t1 #PROT g12182.t1 g12182 MLLSRALRPLAGRQSAQAARVCGVRSLSTATIDKSSGSIDVKWKDGTSSRFHPRWLRDACYCQSCVHPHSGQKLFSPADLPQSEFVPVKASVTPPPEGVHVSPFDGRLPDKASVDAHSLMTVVWDSKHVSAYPLAMLREHSSGLGGVHLPTPIPWGSEIGDDLPSVEFKDYMAPTSNAGLKRALRHVAEKGICFIRNVPRNEGRVASLGERIGSVRDTFYGRVWDVVSTTNAINIAYTSLHLGLHQDLLYFETPPGLQILHCLEFQVSGGDSLFMDGLKAAEVLRAESQAHYDTLSRIPVTYNYRNSAHHRRFRHPIIVPPARHGLDVGAVHFAPPFQGPMEFDRAEDIDPFYDAYKAFSMIVRRQSLMLQLRMKEGDAVIFNNRRVLHGRTAFDSAMGRRHLQGSYVDLDDFLSKVRVLLCRPKP* # PASA_UPDATE: g12183.t1, single gene model update, valid-1, status:[pasa:asmbl_1422,status:12], valid-1 # PASA_UPDATE: g12183.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1421,status:12], valid-1 NODE_1385_length_11648_cov_41.4901 . gene 9798 10920 . + . ID=g12183;Name=g12183.t1 NODE_1385_length_11648_cov_41.4901 . mRNA 9798 10920 . + . ID=g12183.t1;Parent=g12183;Name=g12183.t1 NODE_1385_length_11648_cov_41.4901 . five_prime_UTR 9798 9846 . + . ID=g12183.t1.utr5p1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . exon 9798 9857 . + . ID=g12183.t1.exon1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . CDS 9847 9857 . + 0 ID=cds.g12183.t1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . exon 9966 10058 . + . ID=g12183.t1.exon2;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . CDS 9966 10058 . + 1 ID=cds.g12183.t1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . exon 10167 10920 . + . ID=g12183.t1.exon3;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . CDS 10167 10752 . + 1 ID=cds.g12183.t1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . three_prime_UTR 10753 10920 . + . ID=g12183.t1.utr3p1;Parent=g12183.t1 NODE_1385_length_11648_cov_41.4901 . mRNA 9798 10920 . + . ID=g12183.t1.1.5b6be70a;Parent=g12183;Name=g12183.t1 NODE_1385_length_11648_cov_41.4901 . five_prime_UTR 9798 9844 . + . ID=g12183.t1.1.5b6be70a.utr5p1;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . five_prime_UTR 9966 9966 . + . ID=g12183.t1.1.5b6be70a.utr5p2;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . exon 9798 9844 . + . ID=g12183.t1.1.5b6be70a.exon1;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . exon 9966 10058 . + . ID=g12183.t1.1.5b6be70a.exon2;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . CDS 9967 10058 . + 0 ID=cds.g12183.t1.1.5b6be70a;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . exon 10167 10920 . + . ID=g12183.t1.1.5b6be70a.exon3;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . CDS 10167 10752 . + 1 ID=cds.g12183.t1.1.5b6be70a;Parent=g12183.t1.1.5b6be70a NODE_1385_length_11648_cov_41.4901 . three_prime_UTR 10753 10920 . + . ID=g12183.t1.1.5b6be70a.utr3p1;Parent=g12183.t1.1.5b6be70a #PROT g12183.t1 g12183 MLYGMSLTLGTVAPNFTAPSTEGEIKFHEFFGENNWVILFSHPADFTPVCTTELGAVARLAAQGEWAKRNVKLIALSCEGVEAHHGWIPDIQKLGELSGAWPYPILADPRRDLAVQFGMLDPEEKDKAGIPLAARSVFIFGPDKKLKLSILYPATTGRNFDEILRVIDSLQLTANYSVATPANWKDGDRVMVVPSLSDEQAKEKFPKGFEKVEVPSGKGYIRLTPQPNK* #PROT g12183.t1.1.5b6be70a g12183 MSLTLGTVAPNFTAPSTEGEIKFHEFFGENNWVILFSHPADFTPVCTTELGAVARLAAQGEWAKRNVKLIALSCEGVEAHHGWIPDIQKLGELSGAWPYPILADPRRDLAVQFGMLDPEEKDKAGIPLAARSVFIFGPDKKLKLSILYPATTGRNFDEILRVIDSLQLTANYSVATPANWKDGDRVMVVPSLSDEQAKEKFPKGFEKVEVPSGKGYIRLTPQPNK* # PASA_UPDATE: g12178.t1, single gene model update, valid-1, status:[pasa:asmbl_1419,status:12], valid-1 NODE_1385_length_11648_cov_41.4901 . gene 227 1132 . + . ID=g12178;Name=g12178.t1 NODE_1385_length_11648_cov_41.4901 . mRNA 227 1132 . + . ID=g12178.t1;Parent=g12178;Name=g12178.t1 NODE_1385_length_11648_cov_41.4901 . five_prime_UTR 227 228 . + . ID=g12178.t1.utr5p1;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . exon 227 337 . + . ID=g12178.t1.exon1;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . CDS 229 337 . + 0 ID=cds.g12178.t1;Parent=g12178.t1;5_prime_partial=true NODE_1385_length_11648_cov_41.4901 . exon 567 818 . + . ID=g12178.t1.exon2;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . CDS 567 818 . + 2 ID=cds.g12178.t1;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . exon 1007 1132 . + . ID=g12178.t1.exon3;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . CDS 1007 1092 . + 2 ID=cds.g12178.t1;Parent=g12178.t1 NODE_1385_length_11648_cov_41.4901 . three_prime_UTR 1093 1132 . + . ID=g12178.t1.utr3p1;Parent=g12178.t1 #PROT g12178.t1 g12178 GFRLVEKYAMLVGGADTHRMDLSSMVMLKDNHVWSTGSITDAVKRARSVAGFALKIEVECGCEADATQAIAAGADIVMLDNMHPGDLAQAAARLKAVHPHVTIEGSGGITEDNLASYFCPHVDVLSLGSITQGVPHVDFSLKIDKRPS* # PASA_UPDATE: g12180.t1, single gene model update, valid-1, status:[pasa:asmbl_1420,status:3], valid-1 NODE_1385_length_11648_cov_41.4901 . gene 2162 4810 . + . ID=g12180;Name=g12180.t1 NODE_1385_length_11648_cov_41.4901 . mRNA 2162 4810 . + . ID=g12180.t1;Parent=g12180;Name=g12180.t1 NODE_1385_length_11648_cov_41.4901 . five_prime_UTR 2162 2261 . + . ID=g12180.t1.utr5p1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 2162 2280 . + . ID=g12180.t1.exon1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 2262 2280 . + 0 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 2402 3051 . + . ID=g12180.t1.exon2;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 2402 3051 . + 2 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 3258 3492 . + . ID=g12180.t1.exon3;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 3258 3492 . + 0 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 3735 3887 . + . ID=g12180.t1.exon4;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 3735 3887 . + 2 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 4064 4382 . + . ID=g12180.t1.exon5;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 4064 4382 . + 2 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . exon 4648 4810 . + . ID=g12180.t1.exon6;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . CDS 4648 4789 . + 1 ID=cds.g12180.t1;Parent=g12180.t1 NODE_1385_length_11648_cov_41.4901 . three_prime_UTR 4790 4810 . + . ID=g12180.t1.utr3p1;Parent=g12180.t1 #PROT g12180.t1 g12180 MAYVCAVTGVVPEDAVVSRVSGHIYERRVLEKYLADNGTDPVTGQSMGGDDIIAVKPTKPAVRPRPPTATSIPALLKTFQDEWDAVMLESYTLKLQLETVRQQLSQTLYEHDAACRTVARLARERDQARAALANFRPIAATSGATDSAMEGVETAPQADSAPGASASLPESVVGVLTSVAGSLTKGRKDRRKEKNEARDGELTQKYRSASLQNSYPAVHSASQPGILSIAVHPNGSHILTGGVDKNAVLFDKSKGQTVGVMSGHTKKVTSVLLHPTADVAFTASQDSTVRFFSTTDFSQRAVLKEHSKEITGITLHASSQYIVSASADKSWSFSDVESARSITTVRGSSQDAGFTIPRFHPDGLILATGTTAGTVKVWDLKQLMPVATFEGHTGSIRGIAFSDNGYHLATAGEDSTVKLWDLRHLTNFHSIQLGEGYNVKSLEFDPLGLFLGVGGSDVRVYRANKTWDHLSTLNDHTGDVTGVAFAPDSSYLASVSMDRSLKIFA* # PASA_UPDATE: g11443.t1, single gene model update, valid-1, status:[pasa:asmbl_6045,status:3], valid-1 NODE_3420_length_3507_cov_87.5576 . gene 35 2329 . - . ID=g11443;Name=g11443.t1 NODE_3420_length_3507_cov_87.5576 . mRNA 35 2329 . - . ID=g11443.t1;Parent=g11443;Name=g11443.t1 NODE_3420_length_3507_cov_87.5576 . five_prime_UTR 2276 2329 . - . ID=g11443.t1.utr5p1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . exon 2153 2329 . - . ID=g11443.t1.exon1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . CDS 2153 2275 . - 0 ID=cds.g11443.t1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . exon 1694 1853 . - . ID=g11443.t1.exon2;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . CDS 1694 1853 . - 0 ID=cds.g11443.t1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . exon 1195 1282 . - . ID=g11443.t1.exon3;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . CDS 1195 1282 . - 2 ID=cds.g11443.t1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . exon 35 862 . - . ID=g11443.t1.exon4;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . CDS 100 862 . - 1 ID=cds.g11443.t1;Parent=g11443.t1 NODE_3420_length_3507_cov_87.5576 . three_prime_UTR 35 99 . - . ID=g11443.t1.utr3p1;Parent=g11443.t1 #PROT g11443.t1 g11443 MSSEDENVAPGSSDDLPRESTATSASDEWMDVLGNGLLKLKTIKPGNQEAERPVNGQTVTLHYIGRLQSDDSEVESTRSGNPLVFRLGEGETLTVFDLVVALMYPGEIALVRTGARYAYGSQGKPPLIPADAALEYEIELVDIGLQSAPKTMTVAQRLETADGKRRRGNEQFSRGDFESALSSYTRAVSFLDAIPDEPGAGDDAADEGYVFPLSDADMVAAHATDAGRQLLVHCLSNMTVCQLRIGLHDAALKTSERVLSIDPMNVKSLYRKAQASRSLGELDVAHDALVAAAKIEPSNRDVRAELDVVRQERKKLREKERRVYGGMLKGLNYDDVSASPSAQPDSWQSVWRYLSSPAMWAIAIVVVGVVGALLARS* # ORIGINAL: g2899.t1 original gene structure, not modified by PASA NODE_6901_length_495_cov_39.5476_potentialcontaminant AUGUSTUS gene 2 468 . + . ID=g2899;Name=g2899.t1 NODE_6901_length_495_cov_39.5476_potentialcontaminant AUGUSTUS mRNA 2 468 . + . ID=g2899.t1;Parent=g2899;Name=g2899.t1 NODE_6901_length_495_cov_39.5476_potentialcontaminant AUGUSTUS exon 2 468 . + . ID=g2899.t1.exon1;Parent=g2899.t1 NODE_6901_length_495_cov_39.5476_potentialcontaminant AUGUSTUS CDS 2 468 . + 2 ID=cds.g2899.t1;Parent=g2899.t1 #PROT g2899.t1 g2899 ADSGLFAGANIRRPLNPLTGDEASSVNEDSEDNEIYVENVSKDEYKIFWGALTLNVHFVGGKRFVRLNNTILARGFEVEKVVEMEDTQRIEQIRKADYWNSGMGVENFIPKSERPGPQVHVGINRRGEHETVVINNCNTELFAKALDLFYEYNF* # ORIGINAL: g7531.t1 original gene structure, not modified by PASA NODE_3977_length_2417_cov_34.0982 AUGUSTUS gene 328 1355 . - . ID=g7531;Name=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS mRNA 328 1355 . - . ID=g7531.t1;Parent=g7531;Name=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS exon 1343 1355 . - . ID=g7531.t1.exon1;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS CDS 1343 1355 . - 0 ID=cds.g7531.t1;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS exon 1108 1236 . - . ID=g7531.t1.exon2;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS CDS 1108 1236 . - 2 ID=cds.g7531.t1;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS exon 719 897 . - . ID=g7531.t1.exon3;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS CDS 719 897 . - 2 ID=cds.g7531.t1;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS exon 328 474 . - . ID=g7531.t1.exon4;Parent=g7531.t1 NODE_3977_length_2417_cov_34.0982 AUGUSTUS CDS 328 474 . - 0 ID=cds.g7531.t1;Parent=g7531.t1 #PROT g7531.t1 g7531 MHTLGLCFSVPLTSKPPPSLLNIYKELQTDIGLTPPTHGNLEAWAKQGVLLLNASLTVRSGASNSHANKGWEKFTDAVIQYINANCPNVVFMLWGAYAQKKCSSIDKKRHLALETVHPSPLSASRGWFGCRHFSKANVFLTSHGLEPIDWTAIAK* # ORIGINAL: g10765.t1 original gene structure, not modified by PASA NODE_3119_length_4257_cov_43.4546 AUGUSTUS gene 121 1776 . + . ID=g10765;Name=g10765.t1 NODE_3119_length_4257_cov_43.4546 AUGUSTUS mRNA 121 1776 . + . ID=g10765.t1;Parent=g10765;Name=g10765.t1 NODE_3119_length_4257_cov_43.4546 AUGUSTUS exon 121 708 . + . ID=g10765.t1.exon1;Parent=g10765.t1 NODE_3119_length_4257_cov_43.4546 AUGUSTUS CDS 121 708 . + 0 ID=cds.g10765.t1;Parent=g10765.t1 NODE_3119_length_4257_cov_43.4546 AUGUSTUS exon 838 1776 . + . ID=g10765.t1.exon2;Parent=g10765.t1 NODE_3119_length_4257_cov_43.4546 AUGUSTUS CDS 838 1776 . + 0 ID=cds.g10765.t1;Parent=g10765.t1 #PROT g10765.t1 g10765 AGLRRTFQWVTQELLDAVEGNQFRPLIYSVAFLHTAIQERRKFGPLGWNVPYEFNHADLAASLQFLQGYLYDLSPRKPISWPAVRYMVCDIHYGGRVTDGRDMQLLRTFGRLWLSERLFSDDFEFASKYPIVHASALKDFRASIEALPATDSPRLFGLHSNADIACRATQAELVFAAMGELQPREGGSTSTTSKEQVVDGIAADMLERMPAPFLPTDVRTRLAAAGASLPMNICLAQEIDRLSQVLAFVSADLGELRRAIAGSAIMSDALAAVADALFSGRTPRAWESMSWAAGALGTWFADLVARAAQLRSWLCDGRPKSYWLAGIANPQGLLTAMRQEAARSRPGWALDSVGLQTDVLRKGKEDITEPPTEGMYVHGLYIEGASWDRRAGLLGESAAKVIHTVLPIVHLYAAPIDESGAVGPPPANVAVADRPRRTDDQRERDKRNVSKSKETAGSVDAPETVYKCPVYRNGVRGEGSIVFECGLRSTVPAEHWIMEGVALLLSIV* # ORIGINAL: g14032.t1 original gene structure, not modified by PASA NODE_3201_length_4032_cov_31.1107 AUGUSTUS gene 1700 3158 . - . ID=g14032;Name=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS mRNA 1700 3158 . - . ID=g14032.t1;Parent=g14032;Name=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS exon 3118 3158 . - . ID=g14032.t1.exon1;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS CDS 3118 3158 . - 0 ID=cds.g14032.t1;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS exon 2580 2681 . - . ID=g14032.t1.exon2;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS CDS 2580 2681 . - 1 ID=cds.g14032.t1;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS exon 2131 2196 . - . ID=g14032.t1.exon3;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS CDS 2131 2196 . - 1 ID=cds.g14032.t1;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS exon 1700 1793 . - . ID=g14032.t1.exon4;Parent=g14032.t1 NODE_3201_length_4032_cov_31.1107 AUGUSTUS CDS 1700 1793 . - 1 ID=cds.g14032.t1;Parent=g14032.t1 #PROT g14032.t1 g14032 MSVFGPRSIKLDSLHLDSNLLGGRLNESDPFAEDLPPYMFKSLVADFVGLSGNNIRTLRKALWGATLKIINLYSNNISSIHERAFKDSKGSLAALCVCRE* # ORIGINAL: g10150.t1 original gene structure, not modified by PASA NODE_1403_length_11552_cov_37.5556 AUGUSTUS gene 998 6485 . + . ID=g10150;Name=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS mRNA 998 6485 . + . ID=g10150.t1;Parent=g10150;Name=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 998 1076 . + . ID=g10150.t1.exon1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 998 1076 . + 0 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 1241 1430 . + . ID=g10150.t1.exon2;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 1241 1430 . + 2 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 1662 1916 . + . ID=g10150.t1.exon3;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 1662 1916 . + 1 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 2292 3240 . + . ID=g10150.t1.exon4;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 2292 3240 . + 1 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 3370 4459 . + . ID=g10150.t1.exon5;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 3370 4459 . + 0 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 4789 4980 . + . ID=g10150.t1.exon6;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 4789 4980 . + 2 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 5241 5603 . + . ID=g10150.t1.exon7;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 5241 5603 . + 2 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 5786 5876 . + . ID=g10150.t1.exon8;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 5786 5876 . + 2 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 6092 6236 . + . ID=g10150.t1.exon9;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 6092 6236 . + 1 ID=cds.g10150.t1;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 6438 6485 . + . ID=g10150.t1.exon10;Parent=g10150.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 6438 6485 . + 0 ID=cds.g10150.t1;Parent=g10150.t1 #PROT g10150.t1 g10150 MSAANSPRPVRKTGSNDALPVAEVQSSDPVKLQKHLTLLRQEYLKLQARALEMEKALAVAMAASNQTARDNYVSRILKKVEELFDKDTFSDVAIKVGGRVIRAHKFVLLARGERWTDGDFNKAAEIELPNLSFEVGWALLRWVYTDRTEIRQDVQFAIELLTASNKYSLVGLKERCEHMLVSCVTVENACHLFEVADTAAASELRRVCATLILNYWTDIPESKFVAMPAPLLYELFKQITRYPLHMGIKHGREDVVFLFLIEHSADAARKISEPDENNDVPLHLALIDRHEEVARTLVSHSCDVDAPRASDGYTLLHAALDRCDDFSASFLIDNGANVAAASIDGSLPLHVATAKNLPAMVSHLVSARAPSNAQDGLGRTALHVAVSNDFSDIVGILLKEADALNLNVRDKEGRPAVWLALERKKFGLASTLRDNGCDLRVTDPAGDSMLHRALRVELAEASEFLIDSGVELNCGGAGGQTPLHIASEKGMVSTVSRLLQKGANPNAKDNTGTSVLHTCVHFDRAEVLATLLDDPSKIELNPRDGADESPLSLALAQDKHHLALQLVEAGADVDAKYAKGLTPLHQRIIAGDERGALFLLKHKAALEAPTPAPGRRVPLQLAVQHKLQKVTEELCRLGAKVDVPDENGAPPVWTALCAGSESIASVLVRHKCELNGRDRDGNGMLHQAILRRNAPAAAFLAKNGADVNAKSADGRTPLHMASFEGLADVVEALLGKQAHVNATDTESRTALHVAVSAKQDGSVSALLSHPGIDLALRDKSGCTAFGIALETKNEDIAKTMLSKSPAVADHVDGNGRNFLHVASESGDLERVLFLLVIKVEVDARTHDAQNATALILAATNGNETVCRHLIQAGAEVNASDCQRRTALHFASLANHGAIVGLLLENGADVGRADSDGNTPLHLAIERRHVHIVRTLLKEGGTTPIVANAKGHTPLHVLGINGAGPNALAVFEILSQAGCASDMNATDHDGNTALLLAFAAGAEPLCVAMVRARAHLSIPNKNGFSCMDAGNRGRIQKAMLESVPVELAWIDAKECQACKTKFTVQKRKHHCRHCARILCGKCSTRQLPIIKFDEMKPVRVCDTCYDVIAAMAGQPPLTAHDTMRRQDSGDMDDD* # PASA_UPDATE: g10151.t1, single gene model update, valid-1, status:[pasa:asmbl_1482,status:12], valid-1 NODE_1403_length_11552_cov_37.5556 . gene 7225 9804 . + . ID=g10151;Name=g10151.t1 NODE_1403_length_11552_cov_37.5556 . mRNA 7225 9804 . + . ID=g10151.t1;Parent=g10151;Name=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 7225 7371 . + . ID=g10151.t1.exon1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 7225 7371 . + 0 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 7587 7675 . + . ID=g10151.t1.exon2;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 7587 7675 . + 0 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 7848 7990 . + . ID=g10151.t1.exon3;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 7848 7990 . + 1 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 8123 8175 . + . ID=g10151.t1.exon4;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 8123 8175 . + 2 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 8319 8527 . + . ID=g10151.t1.exon5;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 8319 8527 . + 0 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 8708 8858 . + . ID=g10151.t1.exon6;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 8708 8858 . + 1 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 9141 9239 . + . ID=g10151.t1.exon7;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 9141 9239 . + 0 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . exon 9478 9804 . + . ID=g10151.t1.exon8;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . CDS 9478 9636 . + 0 ID=cds.g10151.t1;Parent=g10151.t1 NODE_1403_length_11552_cov_37.5556 . three_prime_UTR 9637 9804 . + . ID=g10151.t1.utr3p1;Parent=g10151.t1 #PROT g10151.t1 g10151 MADAHSDEPTWAEYFRTTVPPADLDVHSNQIKRFVADQQRLKRRTVLITSGGTTVPLENQTVRFLDNFSAGTRGSASAEYFLERGYAVIFMHRHHSLEPFTRHFPREKILDLFSLTHTGDGATHVEVASEYHDLLLKNLVKSTKAFSENRLLKISFVTVTDYLFLLREATHVLSALGPDAALYLAAAVSDFFIPSSAMVGVANRPFARDALCGIDLVAGVVGLQVEHKIQSGSGPLRLTMEQVPKILSPLVKEWAPHAFTVSFKLETDPAILIAKARGSIERYGHQLVIGNILNTRKYTVTFVTRDTATDITIPLDERSDPNREIEVDIVDSVIAMHEQFATADARTRK* # PASA_UPDATE: g10152.t1, single gene model update, valid-1, status:[pasa:asmbl_1481,status:12], valid-1 NODE_1403_length_11552_cov_37.5556 . gene 9811 11199 . - . ID=g10152;Name=g10152.t1 NODE_1403_length_11552_cov_37.5556 . mRNA 9811 11199 . - . ID=g10152.t1;Parent=g10152;Name=g10152.t1 NODE_1403_length_11552_cov_37.5556 . five_prime_UTR 11141 11199 . - . ID=g10152.t1.utr5p1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . five_prime_UTR 10915 10927 . - . ID=g10152.t1.utr5p2;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . exon 11141 11199 . - . ID=g10152.t1.exon1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . exon 10880 10927 . - . ID=g10152.t1.exon2;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . CDS 10880 10914 . - 0 ID=cds.g10152.t1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . exon 10537 10639 . - . ID=g10152.t1.exon3;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . CDS 10537 10639 . - 1 ID=cds.g10152.t1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . exon 10254 10375 . - . ID=g10152.t1.exon4;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . CDS 10254 10375 . - 0 ID=cds.g10152.t1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . exon 9811 10017 . - . ID=g10152.t1.exon5;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . CDS 9918 10017 . - 1 ID=cds.g10152.t1;Parent=g10152.t1 NODE_1403_length_11552_cov_37.5556 . three_prime_UTR 9811 9917 . - . ID=g10152.t1.utr3p1;Parent=g10152.t1 #PROT g10152.t1 g10152 MRTDDDKDLSAAIDDVSISIVEPSEFIVSLFASLRELSDMGLPADTCTMFVEDRLQELYHRSRVVAAYVTEAHELPVPAKAMARALGIHLSDLPLLVAVASTHTPDVAERLRLFDDGEG* # ORIGINAL: g10149.t1 original gene structure, not modified by PASA NODE_1403_length_11552_cov_37.5556 AUGUSTUS gene 20 187 . - . ID=g10149;Name=g10149.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS mRNA 20 187 . - . ID=g10149.t1;Parent=g10149;Name=g10149.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS exon 20 187 . - . ID=g10149.t1.exon1;Parent=g10149.t1 NODE_1403_length_11552_cov_37.5556 AUGUSTUS CDS 20 187 . - 0 ID=cds.g10149.t1;Parent=g10149.t1 #PROT g10149.t1 g10149 MSVRRASTEAGDKDVKVHLPQRDLFNNILAHFPQPITYAVAYGSGVFVQPGNDKVQ # PASA_UPDATE: g8773.t1, single gene model update, valid-1, status:[pasa:asmbl_5022,status:12], valid-1 NODE_2796_length_5101_cov_41.3762 . gene 1616 4703 . + . ID=g8773;Name=g8773.t1 NODE_2796_length_5101_cov_41.3762 . mRNA 1616 4703 . + . ID=g8773.t1;Parent=g8773;Name=g8773.t1 NODE_2796_length_5101_cov_41.3762 . five_prime_UTR 1616 1815 . + . ID=g8773.t1.utr5p1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 1616 1882 . + . ID=g8773.t1.exon1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 1816 1882 . + 0 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 2003 2107 . + . ID=g8773.t1.exon2;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 2003 2107 . + 2 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 2315 2516 . + . ID=g8773.t1.exon3;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 2315 2516 . + 2 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 2785 2918 . + . ID=g8773.t1.exon4;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 2785 2918 . + 1 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 3224 3348 . + . ID=g8773.t1.exon5;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 3224 3348 . + 2 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 3529 3561 . + . ID=g8773.t1.exon6;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 3529 3561 . + 0 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 3709 3876 . + . ID=g8773.t1.exon7;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 3709 3876 . + 0 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 4109 4294 . + . ID=g8773.t1.exon8;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 4109 4294 . + 0 ID=cds.g8773.t1;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . exon 4530 4703 . + . ID=g8773.t1.exon9;Parent=g8773.t1 NODE_2796_length_5101_cov_41.3762 . CDS 4530 4703 . + 0 ID=cds.g8773.t1;Parent=g8773.t1;3_prime_partial=true #PROT g8773.t1 g8773 MSFNFFGQPLFGRPPAPNGLPTVKMEPPTPTAQPTDLSAFFSDVLDPEEFLAASPAISRGSFAGASSHPFGARVQSLGALRAAQSDMASGVAGIAEGGMADMDSLELKLEPGDDDSSEGMDDAEREMKRASHNCSEQKRRDNIKEGFVILRSAIPTLKEGTSRAVILKKSVEYIEMLKKQNKSLSTKVTTGNNRARAQSQLAPRRMSTQALGASDEKVTTNKITYAALVEAIEKRLNLRDGVRNRLVRLMYREEGLMVDVSTEEDLLDYFRKCAISKEVKLSLYVTRPNSSESSPMPESPAVVAGDNPAAMTPLGVAGLDPAGEILEDDEASPAVDDQEVVDEDCVRALHSRLAQHPGMVLGGLRFQQPEWQLGRVYRFVKACSNDFELAEKMILAHF # PASA_UPDATE: g8672.t1, single gene model update, valid-1, status:[pasa:asmbl_3912,status:3], valid-1 NODE_2274_length_6952_cov_42.2981 . gene 1 3366 . + . ID=g8672;Name=g8672.t1 NODE_2274_length_6952_cov_42.2981 . mRNA 1 3366 . + . ID=g8672.t1;Parent=g8672;Name=g8672.t1 NODE_2274_length_6952_cov_42.2981 . five_prime_UTR 1 595 . + . ID=g8672.t1.utr5p1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 1 843 . + . ID=g8672.t1.exon1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 596 843 . + 0 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 1076 1248 . + . ID=g8672.t1.exon2;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 1076 1248 . + 1 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 1409 1566 . + . ID=g8672.t1.exon3;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 1409 1566 . + 2 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 1898 2611 . + . ID=g8672.t1.exon4;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 1898 2611 . + 0 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 2769 2881 . + . ID=g8672.t1.exon5;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 2769 2881 . + 0 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . exon 3069 3366 . + . ID=g8672.t1.exon6;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . CDS 3069 3138 . + 1 ID=cds.g8672.t1;Parent=g8672.t1 NODE_2274_length_6952_cov_42.2981 . three_prime_UTR 3139 3366 . + . ID=g8672.t1.utr3p1;Parent=g8672.t1 #PROT g8672.t1 g8672 MRHHCVSCVYCDCLRHTVYCRQLLAASLRDWGAEVFECPSLNAAQAALSSGLSCPRIAVIDGDLAARKELHRVFGSRGGGSFSGGFLPVSAHVIALCAASAAHLDAQLNRRRISLDSAERAVTRALFEPPLSPGGRSTSSGVSDDSGYTVSQCAPWADAELPKPLKLGELHRHLLRVLRGEEHMCVDSDTASERTEAYIAASELRVDDCFPETNHRQRALSSRQHAAPMPASSQSGQSFGRNPHRLQLSGPGYGFDLCPHLRDVAVREASAKLASMAQSQTEDASSVRSCVADSLTFTADHASILAGHEADATVAHSGLSCLGDRNPDADRNNLSPTTDVNRPLAIPSGERWNSDDMPHKQRAATPQVLVVDDLAVNRLVLGKMLQKLGCTVAYANDGLEAVAKCGKRAQESGEFDVVFMDIQMPNCDGIEATLRIRKDEAKMCGCHVAIIAVTANMPEEQMNICLDAGMEMFLQKPVTMDILKQVLAQYA* # PASA_UPDATE: g8673.t1, single gene model update, valid-1, status:[pasa:asmbl_3913,status:3], valid-1 NODE_2274_length_6952_cov_42.2981 . gene 3411 5072 . - . ID=g8673;Name=g8673.t1 NODE_2274_length_6952_cov_42.2981 . mRNA 3411 5072 . - . ID=g8673.t1;Parent=g8673;Name=g8673.t1 NODE_2274_length_6952_cov_42.2981 . five_prime_UTR 4604 5072 . - . ID=g8673.t1.utr5p1;Parent=g8673.t1 NODE_2274_length_6952_cov_42.2981 . exon 4250 5072 . - . ID=g8673.t1.exon1;Parent=g8673.t1 NODE_2274_length_6952_cov_42.2981 . CDS 4250 4603 . - 0 ID=cds.g8673.t1;Parent=g8673.t1 NODE_2274_length_6952_cov_42.2981 . exon 3411 3983 . - . ID=g8673.t1.exon2;Parent=g8673.t1 NODE_2274_length_6952_cov_42.2981 . CDS 3474 3983 . - 0 ID=cds.g8673.t1;Parent=g8673.t1 NODE_2274_length_6952_cov_42.2981 . three_prime_UTR 3411 3473 . - . ID=g8673.t1.utr3p1;Parent=g8673.t1 #PROT g8673.t1 g8673 MATNIMACASRKPIHVLLGAYGVIMLLFTIAGQADAGASFSVTVAPSGALQFSPSSITVPVGGTVVWTWGGNNHNVVQVGSSGSCTALTGGFASSLQSTGATFSFTFNTAGTFYYVCTPHCSLGMQAQVIVSSPIDTVALSTSSAARVQASASAYSASAFQVAASASSASVAALPTVGPLSGIIFRVSSVVLYDDPLDRVLVCQPLLGCIIYDNMSTTAAYGVGSEHEREALGHVTATPLFTATVDDAGQAVSVCQSGLVRRANATAPWEAFAVWLYPNGTSSSFLS* # ORIGINAL: g8674.t1 original gene structure, not modified by PASA NODE_2274_length_6952_cov_42.2981 AUGUSTUS gene 6120 6536 . + . ID=g8674;Name=g8674.t1 NODE_2274_length_6952_cov_42.2981 AUGUSTUS mRNA 6120 6536 . + . ID=g8674.t1;Parent=g8674;Name=g8674.t1 NODE_2274_length_6952_cov_42.2981 AUGUSTUS exon 6120 6536 . + . ID=g8674.t1.exon1;Parent=g8674.t1 NODE_2274_length_6952_cov_42.2981 AUGUSTUS CDS 6120 6536 . + 0 ID=cds.g8674.t1;Parent=g8674.t1 #PROT g8674.t1 g8674 MPRLPQSLAWRGPLPCAAVMIVVLIATATVALASPAGPSGSVYTSSLGLVIGRGGEAVACNGEDYGCIKGHLMDDLPLWETLGVGALGKTQPGELTVVPAGESLYIGITAMGAYVGTAKNGTFDLLGIWDCDGCPASE* # ORIGINAL: g6842.t1 original gene structure, not modified by PASA NODE_3784_length_2764_cov_35.7765 AUGUSTUS gene 1650 2481 . - . ID=g6842;Name=g6842.t1 NODE_3784_length_2764_cov_35.7765 AUGUSTUS mRNA 1650 2481 . - . ID=g6842.t1;Parent=g6842;Name=g6842.t1 NODE_3784_length_2764_cov_35.7765 AUGUSTUS exon 2266 2481 . - . ID=g6842.t1.exon1;Parent=g6842.t1 NODE_3784_length_2764_cov_35.7765 AUGUSTUS CDS 2266 2481 . - 0 ID=cds.g6842.t1;Parent=g6842.t1 NODE_3784_length_2764_cov_35.7765 AUGUSTUS exon 1650 2048 . - . ID=g6842.t1.exon2;Parent=g6842.t1 NODE_3784_length_2764_cov_35.7765 AUGUSTUS CDS 1650 2048 . - 0 ID=cds.g6842.t1;Parent=g6842.t1 #PROT g6842.t1 g6842 MVKLYYFPGACSLASHIVASEAGVEIELIKVDITTRTTSTGQNWDAISPKGYVPLLEFDDGSILSEGQVISQFLADKAPSTGLIPAAGTFERVRVLEWLAYISTELQKGFGVLFNKAMTETARAEAITKLSKHLAYTDSVLAKTGAYLTGAQFTVADAYLFTVVNWRKWVNFDISAFPAIVAFQARVAERPKVHAALKEEGLAQ* # PASA_UPDATE: g6841.t1, single gene model update, valid-1, status:[pasa:asmbl_6541,status:12], valid-1 NODE_3784_length_2764_cov_35.7765 . gene 70 1303 . + . ID=g6841;Name=g6841.t1 NODE_3784_length_2764_cov_35.7765 . mRNA 70 1303 . + . ID=g6841.t1;Parent=g6841;Name=g6841.t1 NODE_3784_length_2764_cov_35.7765 . five_prime_UTR 70 71 . + . ID=g6841.t1.utr5p1;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . exon 70 185 . + . ID=g6841.t1.exon1;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . CDS 72 185 . + 0 ID=cds.g6841.t1;Parent=g6841.t1;5_prime_partial=true NODE_3784_length_2764_cov_35.7765 . exon 393 662 . + . ID=g6841.t1.exon2;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . CDS 393 662 . + 0 ID=cds.g6841.t1;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . exon 927 1303 . + . ID=g6841.t1.exon3;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . CDS 927 1097 . + 0 ID=cds.g6841.t1;Parent=g6841.t1 NODE_3784_length_2764_cov_35.7765 . three_prime_UTR 1098 1303 . + . ID=g6841.t1.utr3p1;Parent=g6841.t1 #PROT g6841.t1 g6841 AGAIVYDIDGTLTVGDEEVVQQAVKDSINVSHDIKLRKGAVSLVRMWASKGYLPIYLSGRAGSFYNLTRMWLVRHGFPPGAIHHTRTHVPTLPIYPSVGLFKRDYVRSLQEIGVNVFAAYGNTVTDIKAYAECGLPKSRTFIVGPHGGKLGSVLVGRKNFKDHIGEIDAFPDADISAPRESLEW* # ORIGINAL: g14087.t1 original gene structure, not modified by PASA NODE_1990_length_8185_cov_46.3507 AUGUSTUS gene 133 2176 . - . ID=g14087;Name=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS mRNA 133 2176 . - . ID=g14087.t1;Parent=g14087;Name=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 1199 2176 . - . ID=g14087.t1.exon1;Parent=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 1199 2176 . - 0 ID=cds.g14087.t1;Parent=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 540 724 . - . ID=g14087.t1.exon2;Parent=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 540 724 . - 0 ID=cds.g14087.t1;Parent=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 133 229 . - . ID=g14087.t1.exon3;Parent=g14087.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 133 229 . - 1 ID=cds.g14087.t1;Parent=g14087.t1 #PROT g14087.t1 g14087 MTVASSHVERTSSFDTPVYDHILSPDTIGSPHLWNKNAVHSMNNSNANNRANNNQLHPADNPARANSAHPAVNTNGWTGSLAPPGMDSRGDSVNRVRSVLSTALHPEPIPAQPIGAKGKARLAFEALRQESGFFLRKGFGANDVKGENGMIHPKSKFRLVWDVCCILLVLYTLIILPVHVAFYFDGATFGLFVFNSLVDFFFVADIIIIFFTGISDDLNRRIIWDRRTVAMRYVRGWFAIDLISTLPLDIIIEPFGGGDSAETVGNMPTAVRVIKLLYLVKILRVFRLGRYSRRWTHWFHITATVLRLFKFGMALFLFLHWEACIWYLTAFMADFPDDCWVVRLGLRDASSFELYSWALLYVLSLVATAGYGSNTPKVLVEVWTTNIFMFIGNVWHVIVVGFLVAFVLKFEAPAQLFEER # ORIGINAL: g14088.t1 original gene structure, not modified by PASA NODE_1990_length_8185_cov_46.3507 AUGUSTUS gene 2820 6183 . - . ID=g14088;Name=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS mRNA 2820 6183 . - . ID=g14088.t1;Parent=g14088;Name=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 6091 6183 . - . ID=g14088.t1.exon1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 6091 6183 . - 0 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 5387 5585 . - . ID=g14088.t1.exon2;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 5387 5585 . - 0 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 4973 5064 . - . ID=g14088.t1.exon3;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 4973 5064 . - 2 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 4303 4563 . - . ID=g14088.t1.exon4;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 4303 4563 . - 0 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 3866 3981 . - . ID=g14088.t1.exon5;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 3866 3981 . - 0 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 3387 3580 . - . ID=g14088.t1.exon6;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 3387 3580 . - 1 ID=cds.g14088.t1;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS exon 2820 3118 . - . ID=g14088.t1.exon7;Parent=g14088.t1 NODE_1990_length_8185_cov_46.3507 AUGUSTUS CDS 2820 3118 . - 2 ID=cds.g14088.t1;Parent=g14088.t1 #PROT g14088.t1 g14088 MSQQINSVASVSSTDRVQPPQSSSEGPVPPEDIRTLFDFVDTESVDRLMGDCRSAVDHLIESRDAWVSHLDDLALGLEDVLRTWPFFASDNAEKGVEALPPIDRADIVDMRSRVPRADVLGTNDQLLRAMVLLQQKIAAHHERLGSAVTSWLAGGGMSTDYSTMSAGESRFDSRYGANYGGNYGGNSVGGSVSSSSVAMSQQIEQVRREADMLPDVLARMHEALSRMQVVHRDIGARIAKYDVKRRQAMEKQQLLESFASSVRATLSALEADESEHSSRAMEAWVVLEEGGHLFDWYAMFRDSYPKMLVEIQRRHEAHASLNAVAAEVTQRLSALCAAEADVRREFYETAGQFLPPSLCPAVLMESTPNFVVHPERWESQLPVLASMQGLNVASVTSAARVEAGGVQKPVDATLTVT* # ORIGINAL: g7924.t1 original gene structure, not modified by PASA NODE_1578_length_10373_cov_40.9864 AUGUSTUS gene 1361 2158 . - . ID=g7924;Name=g7924.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS mRNA 1361 2158 . - . ID=g7924.t1;Parent=g7924;Name=g7924.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS exon 1361 2158 . - . ID=g7924.t1.exon1;Parent=g7924.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS CDS 1361 2158 . - 0 ID=cds.g7924.t1;Parent=g7924.t1 #PROT g7924.t1 g7924 MPTPMPLIDAHHTQRTSAVDQSHGRIIHALQSDAIEGVDVSHSSHIDSAFRLDTRGKILTWSDALTDATGFTADQVVGRSFECLYPLKDVASDLPSRSLQHARMHGEYDEVADRVRSDESVYSASVTIRAVRGGQGVIVGFTNTTRDITEQMRAFAEDQAEENERIRLAGHRRDALRTSFFARMLQDVITTIEGARTLTQDDPSAGSTRTLRADAHATELLPAAAGCHDAAAASSQDVTYAQVTVMLQDTLDVILALSADDKRNS* # PASA_UPDATE: g7926.t1, single gene model update, valid-1, status:[pasa:asmbl_2025,status:12], valid-1 NODE_1578_length_10373_cov_40.9864 . gene 9537 10075 . - . ID=g7926;Name=g7926.t1 NODE_1578_length_10373_cov_40.9864 . mRNA 9537 10075 . - . ID=g7926.t1;Parent=g7926;Name=g7926.t1 NODE_1578_length_10373_cov_40.9864 . five_prime_UTR 10055 10075 . - . ID=g7926.t1.utr5p1;Parent=g7926.t1 NODE_1578_length_10373_cov_40.9864 . exon 9537 10075 . - . ID=g7926.t1.exon1;Parent=g7926.t1 NODE_1578_length_10373_cov_40.9864 . CDS 9815 10054 . - 0 ID=cds.g7926.t1;Parent=g7926.t1 NODE_1578_length_10373_cov_40.9864 . three_prime_UTR 9537 9814 . - . ID=g7926.t1.utr3p1;Parent=g7926.t1 #PROT g7926.t1 g7926 MLVHDPITSRSRGFFLISRLPEAGTSCPSRIRGWESHGVSKHKASCDSHGHVTSKATTSVGVGGGAACGAASATPPQGN* # PASA_UPDATE: g7925.t1, single gene model update, valid-1, status:[pasa:asmbl_2023,status:12],[pasa:asmbl_2024,status:12], valid-1 NODE_1578_length_10373_cov_40.9864 . gene 5665 9261 . + . ID=g7925;Name=g7925.t1 NODE_1578_length_10373_cov_40.9864 . mRNA 5665 9261 . + . ID=g7925.t1;Parent=g7925;Name=g7925.t1 NODE_1578_length_10373_cov_40.9864 . five_prime_UTR 5665 5778 . + . ID=g7925.t1.utr5p1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 5665 6422 . + . ID=g7925.t1.exon1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 5779 6422 . + 0 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 6800 6932 . + . ID=g7925.t1.exon2;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 6800 6932 . + 1 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 7101 7207 . + . ID=g7925.t1.exon3;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 7101 7207 . + 0 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 7681 7821 . + . ID=g7925.t1.exon4;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 7681 7821 . + 1 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 8055 8180 . + . ID=g7925.t1.exon5;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 8055 8180 . + 1 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 8519 8633 . + . ID=g7925.t1.exon6;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 8519 8633 . + 1 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . exon 8867 9261 . + . ID=g7925.t1.exon7;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . CDS 8867 9169 . + 0 ID=cds.g7925.t1;Parent=g7925.t1 NODE_1578_length_10373_cov_40.9864 . three_prime_UTR 9170 9261 . + . ID=g7925.t1.utr3p1;Parent=g7925.t1 #PROT g7925.t1 g7925 MPTVAAAAAVARVRSVSLWSPPALRFAVAPSLTRKMSAIAHQSSHVADTLHPRQRLLVGRKRMVGAPYADNSVLVAFTSGIASSPTIQQRLMHQTAQGMADASHRNDRVRSAPSRSRTLSEGDAWREDVTALSVVSLQPTRSRALSAVQSSSSSGCSIPLRTAHTPTTTSQKAIAPTRAEAMQKSPFRGSYALYGANWLSAGVGWMQFSTAAGGRHSNGKSHKKATVRFDDRLESASTNSITGFVTEHLDRTKDSPRENILSSAVVVKIEQLSANVKRFELKVEEPEFKFRPGQWVDLFMPSVTAVGGFSICSTPRLLREQRLIELAVKESNHIPAKWMHNECKVGSNVSLRVGGNFHCDEGISHNTLLVAGGIGVTPLLSMFRYFDDCLKGLEGDALFEKSKNRKVVFLYSARSVDDLQYLDDIIGACLRHDQFECRFVASSAAGSQPTSSAVKIPVGLVRDHTRIDASVLEECMGLFPASSARADVVAYLCGPPTMSEAVAQSLVDVGLKRENVKYEKWW* # ORIGINAL: g7923.t1 original gene structure, not modified by PASA NODE_1578_length_10373_cov_40.9864 AUGUSTUS gene 158 892 . - . ID=g7923;Name=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS mRNA 158 892 . - . ID=g7923.t1;Parent=g7923;Name=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS exon 833 892 . - . ID=g7923.t1.exon1;Parent=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS CDS 833 892 . - 0 ID=cds.g7923.t1;Parent=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS exon 390 536 . - . ID=g7923.t1.exon2;Parent=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS CDS 390 536 . - 0 ID=cds.g7923.t1;Parent=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS exon 158 205 . - . ID=g7923.t1.exon3;Parent=g7923.t1 NODE_1578_length_10373_cov_40.9864 AUGUSTUS CDS 158 205 . - 0 ID=cds.g7923.t1;Parent=g7923.t1 #PROT g7923.t1 g7923 MMRPVFADVVAFLAPNLPETLAVSVRSLIKSKGGSIEPHFGGLVSHVIALDVDFAEYKIVQAQAVPLVKPLWVALSSKFTFLLP* # ORIGINAL: g2054.t1 original gene structure, not modified by PASA NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS gene 1756 3048 . - . ID=g2054;Name=g2054.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS mRNA 1756 3048 . - . ID=g2054.t1;Parent=g2054;Name=g2054.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS exon 1756 3048 . - . ID=g2054.t1.exon1;Parent=g2054.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS CDS 1756 3048 . - 0 ID=cds.g2054.t1;Parent=g2054.t1 #PROT g2054.t1 g2054 MPVEASTAGDMAAEAKSMTPITAPMSTQSTSDSVEDEPSVPMPERIRNEIHSLSEDDFQLLANCHTAISAGELHPIVSAMRAAAAIPFGLACCMARLIGMAEDAEVRLLMLRLGVIETTVIAMFMHPDHVELQATACELLATFADEGESRAIMMGMDATTAVVAALLQHTPSERLCHSAMECLTHFSRDNRYGHLVSSDPAPLVGVLKAMRLHPTHKRAQASACHLLSVFVKDSSLHRKLAALGAVELAVKAVAACRGNAKVVEDCLTLCGQLTDDEHVVLRHSLPAISRAILAHATDACIQEPAIASLNGILCRCEGGAKAFLDGAGISTVAACMRAHIGVESIQLGWCGVIDRLAVDDLCRRKIVDDGGIDCIVGAARAHTGCADLRRMGVRLLCKLPREHELRLKHSDRMLILTVALIAGSTVRSLR* # PASA_UPDATE: g2053.t1, single gene model update, valid-1, status:[pasa:asmbl_1229,status:12], valid-1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . gene 393 1119 . - . ID=g2053;Name=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . mRNA 393 1119 . - . ID=g2053.t1;Parent=g2053;Name=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . five_prime_UTR 916 1119 . - . ID=g2053.t1.utr5p1;Parent=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . exon 805 1119 . - . ID=g2053.t1.exon1;Parent=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . CDS 805 915 . - 0 ID=cds.g2053.t1;Parent=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . exon 393 584 . - . ID=g2053.t1.exon2;Parent=g2053.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . CDS 393 584 . - 0 ID=cds.g2053.t1;Parent=g2053.t1 #PROT g2053.t1 g2053 MFSRLTWIGRLSAHIANARVDLTAAHRGYAASSGLFKSREGRRQNVRSAVDNDEDGEVVEDEEDDEVRTLEELREAVKGIDEEAMVHWLTEMVCIACTDG* # ORIGINAL: g2055.t1 original gene structure, not modified by PASA NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS gene 5195 10033 . - . ID=g2055;Name=g2055.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS mRNA 5195 10033 . - . ID=g2055.t1;Parent=g2055;Name=g2055.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS exon 5195 10033 . - . ID=g2055.t1.exon1;Parent=g2055.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant AUGUSTUS CDS 5195 10033 . - 0 ID=cds.g2055.t1;Parent=g2055.t1 #PROT g2055.t1 g2055 MDIDVDANVGVLPSVPMEVQADSAKDGRLDTDSPPPPLLTFMDEGNESYGWDTWGDDADCAYDGSANVDSTADFNAREANGGVSMEDAVLHDAKTVGEVVETPTALPLDPSRGADPEIVTSDGEDGKAPSTETVDVHGDMSDVGVQSVDAGIESTPLIDDDSTPEAYVPPGKSFEEAVKRQYDSGRADGQPSLVALRRPFNSASDSASLTSNSVRAASLFDMPLDGGVLIDRVGGRQSPLAQSREEALLRSCDAAGGDDRTRDASGKSNAPTDLTVAELSSTTSAQATGGASVADKALTPGAAGGHDDIWRDRASAVRPEQAFPPVFAPIVQSDSATSVINGVVNPEDRESVESVCRTDVAAAVNGEQQVGQELRRLEEHRSSSQMQQRHLQREERIPAQLVRKLHHLQGKEKLVEQQQRQDIERLKQMRAQLQERKSRDAFSSSLSAQPVDESMQRQCFAESVPQSDQWLEQGRGDSLFGMAVEVTGGAVDVGPAVTMSADTVHGGQMRQLQPEEHLAPIQRRPSLSAEQQQQQRQQLQENWDVFKAQQQLQQPQDQQQQQLQQQQQLQQQLQQHQIQQQLQQQQQQQLQLQQRQQLQQQQQQLLMGMQQQKPPQRLEEHRESPRMQQPQQLQLQQLQQQQLQQQQLQQQQLQQLQQQRLQQQQLQQQQLQQQQLQQQEELLVQLQHQMQQLLQLQLQPQQQLQQQQQQQMVAHLQQQMQQLLQLQPQPQEQQQQQQQQQQQQQQQMLAHLQQQMQQLVQQKQQQLQQQRHQQQQQLLVQLRQQQQQKHQHQQQQQVQLQPPPSLQHANRPLARRISEGNLTSSAPVPVEPAAHGGRGGRGGRGSRGRPAAVRRISTPSSHGSVAGGTREESASSDRSVDQSDGLGVARVGFSNGAVPASAVQIAIREAITGRGKKAAIDHKQTGTTTGARPIVPKSPTLSLALSTAGSDDRDGVNAATRTATTPSDATQAVTTPSDATRAATTPTIASRSIGARLPTLIDILVVDTLTESLNRDPVDVLARVGQTNGQVAFWFACYKRFQEETRNRDARLVRRLAVAESERTIKWRLDFEFDALTFEAHVHMLAIVHENIVRVLGEIERIRTAFTEVHHRQPLVPSFHGKLKVFEIGWKVTLDNLYTTIVTLIAQRRRALQTAAGFAFPTPAEVASAENIVNMATQSTIVTSEAVAALDTQYKNARMQRLAHLKVLSERVSANNATQREILTARMEDLDQAEALLRAELASLSDVRGAVAHQLKQLNMPPRAMPCAPSSASETDAAAAATTTTTTATPADTTTTDPYPDTTATATPADTTTTGIANGMKSHVETRVLLAQCDRVMGNTNGGVNRGVVESEGNGKGGPDLHTTPVMSRSAHEGAYASPPTGWKNSKNSATDWGDDDAEEEQRECFDSPWRNVGTVDPVGVRLSRNRVSVEGRSGPGVHVVWSAPDDDGRDESREAHVVSSLNIAPRVTTSVARDAVDGVSSPLNEPNVAVDDAPLGVDQASLASESGSTLNPSSAHLERSESTEQLQRRVRTMVVARDGMALPVRQTSLSSLSLVSSVSPSVSAPALPMHAIPDRDSSRGPTDLTRKRSRSIEEPSESTEFHVDKSQKNRK* # PASA_UPDATE: g2056.t1, single gene model update, valid-1, status:[pasa:asmbl_1230,status:12], valid-1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . gene 10822 11926 . - . ID=g2056;Name=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . mRNA 10822 11926 . - . ID=g2056.t1;Parent=g2056;Name=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . exon 11696 11926 . - . ID=g2056.t1.exon1;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . CDS 11696 11926 . - 0 ID=cds.g2056.t1;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . exon 11372 11450 . - . ID=g2056.t1.exon2;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . CDS 11372 11450 . - 0 ID=cds.g2056.t1;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . exon 10822 11044 . - . ID=g2056.t1.exon3;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . CDS 10842 11044 . - 2 ID=cds.g2056.t1;Parent=g2056.t1 NODE_1331_length_12045_cov_60.2947_potentialcontaminant . three_prime_UTR 10822 10841 . - . ID=g2056.t1.utr3p1;Parent=g2056.t1 #PROT g2056.t1 g2056 MLQALKHDLARTLFARAGLFAEDAEEDMPAVSTDKGASAASSNQRRPLRGNLPRRTFHALTGAFLACDYVFPDESAEESSERLDTMLGLKDPPSIASLNESYDESVRKVSAIATADAGKKKVHEVTKSSTSVSHGANTKAKSASNGVPLAAILAAIAAIVCAVIASVLLQ* # ORIGINAL: g2867.t1 original gene structure, not modified by PASA NODE_17212_length_229_cov_0.811688_potentialcontaminant AUGUSTUS gene 106 195 . - . ID=g2867;Name=g2867.t1 NODE_17212_length_229_cov_0.811688_potentialcontaminant AUGUSTUS mRNA 106 195 . - . ID=g2867.t1;Parent=g2867;Name=g2867.t1 NODE_17212_length_229_cov_0.811688_potentialcontaminant AUGUSTUS exon 106 195 . - . ID=g2867.t1.exon1;Parent=g2867.t1 NODE_17212_length_229_cov_0.811688_potentialcontaminant AUGUSTUS CDS 106 195 . - 0 ID=cds.g2867.t1;Parent=g2867.t1 #PROT g2867.t1 g2867 MGLTWSFGFFAIIDELSGLWYPFVILNTLQ # ORIGINAL: g11568.t1 original gene structure, not modified by PASA NODE_8247_length_380_cov_44.7803 AUGUSTUS gene 1 344 . - . ID=g11568;Name=g11568.t1 NODE_8247_length_380_cov_44.7803 AUGUSTUS mRNA 1 344 . - . ID=g11568.t1;Parent=g11568;Name=g11568.t1 NODE_8247_length_380_cov_44.7803 AUGUSTUS exon 1 344 . - . ID=g11568.t1.exon1;Parent=g11568.t1 NODE_8247_length_380_cov_44.7803 AUGUSTUS CDS 1 344 . - 0 ID=cds.g11568.t1;Parent=g11568.t1 #PROT g11568.t1 g11568 MMTELFVHCGSPIKDIERFDSGTHNMTWQCRGYYDAIASFVAFISQSSKQPELSTGDQQPPHGSPRHLRRGAGGWGAGTVGHNLRGLSGGQNLIDVWKDDAVPEGERSAVGLNY # PASA_UPDATE: g3667.t1, single gene model update, valid-1, status:[pasa:asmbl_7548,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 23714 25505 . + . ID=g3667;Name=g3667.t1 NODE_46_length_50972_cov_42.9599 . mRNA 23714 25505 . + . ID=g3667.t1;Parent=g3667;Name=g3667.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 23714 23735 . + . ID=g3667.t1.utr5p1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . exon 23714 23814 . + . ID=g3667.t1.exon1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . CDS 23736 23814 . + 0 ID=cds.g3667.t1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . exon 24148 24428 . + . ID=g3667.t1.exon2;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . CDS 24148 24428 . + 2 ID=cds.g3667.t1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . exon 24621 24789 . + . ID=g3667.t1.exon3;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . CDS 24621 24789 . + 0 ID=cds.g3667.t1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . exon 25259 25505 . + . ID=g3667.t1.exon4;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . CDS 25259 25290 . + 2 ID=cds.g3667.t1;Parent=g3667.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 25291 25505 . + . ID=g3667.t1.utr3p1;Parent=g3667.t1 #PROT g3667.t1 g3667 MAFVSFAHVVLVALAVVALQGRTSSADPAPRSFGGKVDFTCLSTVDLSGGAVNIVKDAGSAELVCKTLLDDGSSLLSCGGRYVVENPAGGEELALAFKLDNTVDEANYIVARIESTGKVSIVFSKDDKGKDVVGQTAVFVDGPSEVAESGGHYKSGIASTDSIVCRGALQPYFLKAACGNNRRRGC* # ORIGINAL: g3662.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 2326 4427 . - . ID=g3662;Name=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 2326 4427 . - . ID=g3662.t1;Parent=g3662;Name=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 4164 4427 . - . ID=g3662.t1.exon1;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 4164 4427 . - 0 ID=cds.g3662.t1;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 3928 4051 . - . ID=g3662.t1.exon2;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 3928 4051 . - 0 ID=cds.g3662.t1;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 3621 3837 . - . ID=g3662.t1.exon3;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 3621 3837 . - 2 ID=cds.g3662.t1;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 2976 3387 . - . ID=g3662.t1.exon4;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 2976 3387 . - 1 ID=cds.g3662.t1;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 2326 2688 . - . ID=g3662.t1.exon5;Parent=g3662.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 2326 2688 . - 0 ID=cds.g3662.t1;Parent=g3662.t1 #PROT g3662.t1 g3662 MANAELSEGFPALRLDDVDTGDGTTLDGFVRATLHQPMLKGRAFTWLPAVGRRMKLSCREATLKATLAEFDSYVALSAKKTLVAKDCRGENPTQFDRTHPEAGLVLRILHGGWYWRDQGFPDFLGNCAIVAVDEFNYVLDTTKSSRQKRRALLTVVVRVLGNAMHSKAKPFFSVLSGTTAQPIADIIAGSAFPYRLARMPLLSSLKTLASFLERRVHRAQKLPSGAMYGDLEEVGGLVLESCADSDGDSNEGDCVVAVVKLPLLFLSGIVGDPGFLKSMPRNLQDQIRGVIPELRDGHVRWQAFEEFCARFLAVRCGLLHYMESKPGTAPKALLDARIAVKEAIAARDIRSTLVLCSNRRAPCGEQSSECLLLCGEHLRAFFGTAVSELSIMHLEGPEPVNVNTATEECLTWLPGIGERLAGRIVANRGETGYVDWDDLKSRVEYVRAASRCCLKYTNY* # ORIGINAL: g3668.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 26550 28602 . + . ID=g3668;Name=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 26550 28602 . + . ID=g3668.t1;Parent=g3668;Name=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 26550 26596 . + . ID=g3668.t1.exon1;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 26550 26596 . + 0 ID=cds.g3668.t1;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 26699 26792 . + . ID=g3668.t1.exon2;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 26699 26792 . + 1 ID=cds.g3668.t1;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 27201 27258 . + . ID=g3668.t1.exon3;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 27201 27258 . + 0 ID=cds.g3668.t1;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 27794 28602 . + . ID=g3668.t1.exon4;Parent=g3668.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 27794 28602 . + 2 ID=cds.g3668.t1;Parent=g3668.t1 #PROT g3668.t1 g3668 MTAAALTHHHILRFASGGTTVGRAQCRINLTPVQLTTPAGSARIPGSSLWHSQLALLLQNTVSAPLATSTTTASANSVASKSTGTGSAGSASAEVTSTTGAGKSGCFDSTGALRPGSVAFVGLNADGDDSYALVAIDNIPAGTTLRVEDNEWNGTAFNTGESIVKIFINETVNAGNAIVVTYPSSGTGISVIITPGGGKATVDTSDASRGNNRGIASSDETVYVCVMDENDFIFLSAATNGGFSTLNGLLTGKGLVEGETAINLAALDDDCDIGATLATVRFSSLGTRRSKPSTVLLGRRGPCKTAPATRALTAQPQTRLFQRRHLTSGPRAPGN* # ORIGINAL: g3675.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 47585 49735 . + . ID=g3675;Name=g3675.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 47585 49735 . + . ID=g3675.t1;Parent=g3675;Name=g3675.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 47585 48748 . + . ID=g3675.t1.exon1;Parent=g3675.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 47585 48748 . + 0 ID=cds.g3675.t1;Parent=g3675.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 49004 49735 . + . ID=g3675.t1.exon2;Parent=g3675.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 49004 49735 . + 0 ID=cds.g3675.t1;Parent=g3675.t1 #PROT g3675.t1 g3675 MSAADSVQRGRHAASLSRRFLYPHPHNRIFEILTFAMKASGGLLPGVSASRSITIVVQASADRVYHNLLKLVTVWRGPVSIAVLIETDAEERSLRKYIGKQRILRQWVDVHFMRRHGHTKGDKGSFYPINALRNIAVDNVRSEWILVSDLDILPNASMDIFLRELDNAERAFADAYLPGSSACPGLLAYIPPAVELPINVAYNVSLSGTRTGVQYSKEVARNSLENGSMKPMHMYFTLAYMPTNYTQWMSSTTPFEVPYTVRFEPYFIARRTIPLFNDSFVDRGGNFAQLTFHMHAAGYRFIVLPDVFMVDQPHEVIHRAPFVQHLALMWERFSEHVTKLYEVKLHGDAMAGAYSTIKKRHEWDVSRFPGSVFDPRNMIQMAATTHEERYCLMPGLWEVLVMWRDSGPPPIGIVAGCTKPVQFRIHASGRITHSYRPSNIPKTSPDCVIMMGNTTSILNMNLDALHFALDIWAAHSSQLVGFTAAAVKFTTPRASIPPSWQYVPMDAEVTREYHMVMFGTGPIIMHRRHLQAFFELPKVGLRLVDRVKGCDDVALNFAVGHGLSIPPVLVLASINDSGNVTTTSITSQASKDDAATHQSIRSQCVSTFMSLFDTNPLVAGRSVYRFEHLQS* # PASA_UPDATE: g3671.t1, single gene model update, valid-1, status:[pasa:asmbl_7543,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 36385 37935 . - . ID=g3671;Name=g3671.t1 NODE_46_length_50972_cov_42.9599 . mRNA 36385 37935 . - . ID=g3671.t1;Parent=g3671;Name=g3671.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 37922 37935 . - . ID=g3671.t1.utr5p1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . exon 37702 37935 . - . ID=g3671.t1.exon1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . CDS 37702 37921 . - 0 ID=cds.g3671.t1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . exon 37377 37569 . - . ID=g3671.t1.exon2;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . CDS 37377 37569 . - 2 ID=cds.g3671.t1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . exon 37074 37215 . - . ID=g3671.t1.exon3;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . CDS 37074 37215 . - 1 ID=cds.g3671.t1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . exon 36798 36886 . - . ID=g3671.t1.exon4;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . CDS 36798 36886 . - 0 ID=cds.g3671.t1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . exon 36385 36621 . - . ID=g3671.t1.exon5;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . CDS 36462 36621 . - 1 ID=cds.g3671.t1;Parent=g3671.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 36385 36461 . - . ID=g3671.t1.utr3p1;Parent=g3671.t1 #PROT g3671.t1 g3671 MRFTRSCFGNSRPAGQLWWDGRYLLDWGLGISLAVLSFVLTTYAISPYNRDTVVQVVDGTPVLDPTLDYPKHSDTVPDYALYLIAILFPAVVFVCAQYWSRSWHDLHHAALTLCESLTLTVFGKQFMNVAAGRYRPDWYARVATGNDTTIKDGRMSYPSGHAAFSFASMGVLFFYFAGRLKVFKGNQGQLWRAVLAASPLVLAEWIAISRTNDNRHNFSDINAGAVLGFVCATIAYHLQYEPLTSDRTGQPRFRVRDTQSEFEGTSF* # PASA_UPDATE: g3672.t1, single gene model update, valid-1, status:[pasa:asmbl_7550,status:3], valid-1 NODE_46_length_50972_cov_42.9599 . gene 38703 39500 . + . ID=g3672;Name=g3672.t1 NODE_46_length_50972_cov_42.9599 . mRNA 38703 39500 . + . ID=g3672.t1;Parent=g3672;Name=g3672.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 38703 38756 . + . ID=g3672.t1.utr5p1;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . exon 38703 38811 . + . ID=g3672.t1.exon1;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . CDS 38757 38811 . + 0 ID=cds.g3672.t1;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . exon 38896 39122 . + . ID=g3672.t1.exon2;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . CDS 38896 39122 . + 2 ID=cds.g3672.t1;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . exon 39284 39500 . + . ID=g3672.t1.exon3;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . CDS 39284 39406 . + 0 ID=cds.g3672.t1;Parent=g3672.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 39407 39500 . + . ID=g3672.t1.utr3p1;Parent=g3672.t1 #PROT g3672.t1 g3672 MSNPWSTGLFGIFDDMKIFLFGTQAYMLAVNNSVITSGGKATFGIDGESCAKPCFTAGCIGSDGVFCTNACVFCCLPCVYFLWRQEVRTKFQIQGNMLGDCIACCCCFPCAVMQDARELKIRGVAYGDAGKPVV* # PASA_UPDATE: g3663.t1, single gene model update, valid-1, status:[pasa:asmbl_7540,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 5986 10774 . - . ID=g3663;Name=g3663.t1 NODE_46_length_50972_cov_42.9599 . mRNA 5986 10774 . - . ID=g3663.t1;Parent=g3663;Name=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 10735 10774 . - . ID=g3663.t1.exon1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 10735 10774 . - 0 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 10266 10581 . - . ID=g3663.t1.exon2;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 10266 10581 . - 2 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 9622 9772 . - . ID=g3663.t1.exon3;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 9622 9772 . - 1 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 8679 9012 . - . ID=g3663.t1.exon4;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 8679 9012 . - 0 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 8055 8404 . - . ID=g3663.t1.exon5;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 8055 8404 . - 2 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 7604 7755 . - . ID=g3663.t1.exon6;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 7604 7755 . - 0 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 7193 7316 . - . ID=g3663.t1.exon7;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 7193 7316 . - 1 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 6845 6964 . - . ID=g3663.t1.exon8;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 6845 6964 . - 0 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . exon 5986 6560 . - . ID=g3663.t1.exon9;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . CDS 6240 6560 . - 0 ID=cds.g3663.t1;Parent=g3663.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 5986 6239 . - . ID=g3663.t1.utr3p1;Parent=g3663.t1 #PROT g3663.t1 g3663 MGNGVSVSSLQQTQSEIFRNGGHVKVDLDAAERKLDDILNRVERLQNAVENNQAQVSAAQSHHGSSLHADAHEGVAPLRASSSHRMHHHRASITSLTNGKSSSHSVMPRHNSSQSISIGEYAREPITVGRKTGIVCTIGPKTASEEMIGQLVEAGMSIMRLNFSHGSHEYHGSVIKNLRAYLDKHPEKVCAIALDTKGPEIRTGDIEGGGEVRLEAGSTFVLTTDSAFAKKGTSAKVYVDYKGLTTTVTRGFKVFIDDGLISLDVRAIDGSDVVCTVINTAMLGGKKGVNLPMACPDLPAVSEKDREDLVFAVEQGVDFIFASFIRKASHVKEIRAILGEKGKDIKIVSKIENHEGLDNFDEILAETDGVMVSGGTANAGLVALYGWVIVVCFVRGQVARGDLGIEIPIEKVFVVQKMIIAKCNQAGKPVICATQMLESMITNPRPTRAECTDVGSGVLDGSDCVMLSGETAKGAYPIESVTMMGKVCQEAESAIDYKAMFRMHQKSIKHHVGVSEAVASSAVNATIENNAALLIILSDTGSTARWVSKYRPPVPALVVTHSKRVARQSLISRGLVPFVCPEASAYPPDAAIDKAIQFARTAGYVKVGDRVTVIHYAKETDGRTHNLLKILNVWY* # PASA_UPDATE: g3665.t1, single gene model update, valid-1, status:[pasa:asmbl_7547,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 18708 20556 . + . ID=g3665;Name=g3665.t1 NODE_46_length_50972_cov_42.9599 . mRNA 18708 20556 . + . ID=g3665.t1;Parent=g3665;Name=g3665.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 18708 18833 . + . ID=g3665.t1.utr5p1;Parent=g3665.t1 NODE_46_length_50972_cov_42.9599 . exon 18708 19051 . + . ID=g3665.t1.exon1;Parent=g3665.t1 NODE_46_length_50972_cov_42.9599 . CDS 18834 19051 . + 0 ID=cds.g3665.t1;Parent=g3665.t1 NODE_46_length_50972_cov_42.9599 . exon 19323 20556 . + . ID=g3665.t1.exon2;Parent=g3665.t1 NODE_46_length_50972_cov_42.9599 . CDS 19323 20508 . + 1 ID=cds.g3665.t1;Parent=g3665.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 20509 20556 . + . ID=g3665.t1.utr3p1;Parent=g3665.t1 #PROT g3665.t1 g3665 MNVTGLFAQEMQQVRDGPSRPMSFGGGGTLSRRHGQQHKNVSGTVRSRSGIPSENERPSYATKSAEEGYGSLSDPPTNPDVDGPVQVYFDVNVINLHSIDEVEQSVKVDFTIAFYWNDMRPLMIDEEEPDDGRYVWRLRDDLTWDDIWTPAMELINVLEDEQDIYYQVVQVDGNVWIVRHTNYFCTLRAPMDLHRFPFDSQILPVIFRSREYQTRFVQLRRRPHQIGHMAYALMPEVQLPQFDLRQFECRLRRHDYLFMKQFEGEENTQFYELRLEFEIARQPEYYITKIISLYFIMMLMACTVFFLDPADTGARTSISMTIFLSAVAFHFVTNSSLPKVPYSTRMDKFTVFVYVCIFASFVENIAIFRIANRVDDEDAVFRYEMYFLAVFGGSIMVAFAWFLFPWFIPIPPPTTSQLRDPNDPCIVQDRVYDAPPRSPPARKIRAEKRSAGKAGNGAEINIQLVST* # PASA_UPDATE: g3673.t1, single gene model update, valid-1, status:[pasa:asmbl_7546,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 40635 46006 . + . ID=g3673;Name=g3673.t1 NODE_46_length_50972_cov_42.9599 . mRNA 40635 46006 . + . ID=g3673.t1;Parent=g3673;Name=g3673.t1 NODE_46_length_50972_cov_42.9599 . exon 40635 46006 . + . ID=g3673.t1.exon1;Parent=g3673.t1 NODE_46_length_50972_cov_42.9599 . CDS 40635 45866 . + 0 ID=cds.g3673.t1;Parent=g3673.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 45867 46006 . + . ID=g3673.t1.utr3p1;Parent=g3673.t1 #PROT g3673.t1 g3673 MSAASPMGPTRRGDVGGADSRRGSGVAIVPATVPLPAPPTGPTRRGDVGGADSRRGSGVAIVPATVPLPVPPTGPTRRGDVGGADSRRGSGVAIVPATVPLPVPPTGPTRRGDVGGADSRRGSGVAIVPATIPLPAPLTGPTRRGDVGVADSRRGSGVAPAGPVTAVVSTGSSLRLVTEPSGILVTSTGGHPRVHDGSSNDRRSAATHLITPRAAPSAVSRSVDVRTARPPADASTGVSSGRGEVAGDIRRRETASPVLVSPQGLSMHSSFDISRPSNTNIATRPVADPQERDATVGRASSFGTGVALRELQWLHPQIGQQRHGSHGVLSADRRATPKTPHTVFAPGGRTNAPVSEPLSALALPWGQQPPSFDRLTGSTLDAARQSRVYGAGEARVDMRRETRQVVIMSAGRPRPDGAALLAVGAAPREGASEVVGCGLKEDVPVTPTHALASTLNVANRLRDVSSPALIYTAAHGNVPHTRRGSVHALGERNPARPLVAPLQPAPPGKACADPTAIPVPSNSSIGCLSVTPVRVRIARVNWLGPGPDEFGKVGDGQNAIPVAAAHVTPSALTPAATPTFAGVSTASVATEAAACAMERRAQSPCASNAMHTVDAPGGNGFAAPSRPPVFTPELITDPRDIFKRPLQPPMAASGAYSVRDIAVLVSCFDEESYEIVRALSSLRDAFLYVRAMEVASESPFRSVFHVLLVQDGVSGAHPTFIPMASQLVAAFASNLPSPSSATPTSFAAQSGAQTSSDMLSNTASPPPATSAAAHELPPRKSLRDRFKTYFAEPEDTSQPSWLYAPLSASEAYSGTVRTAHDEVKAALEQFKHEQDAAAKRTTEEAALLQKAALVIESRRWDDPINGTWTVTCVVKAAARHLHNTHDWFLRPATGFAAHPSFQYMLTTNARAMFGKSALHQLIDSLDKHPMTVAVTGCQRVLGHGAARPYDADSTTGPPYWPLHMEIRTRLVAVLPPTPLLANTFAHVLRSAQLYEYEAAFVGLMGAFDFAGVIPTVPESCGLFRCAAMYNRSASAETPAKTVIKNISHGVIAMVDDQNLHDGLPMYDEWIFRRAWPLVAYGVVEGLLELFVSLSAALVTVIFFAPFLAVTTIALLFVRLLAAVLWISTKALSFLEACRNELVEFQFCRRGCRWGRDEHGAARTCLSKCSECGLWPYGKRLRRLRAHRELPDGADSSDLLVKDVTGRIPLFFKLTKCLAFDFYFPRLQWRCKCDCNCVSENAELEGNGNGAGRSLDARDFIVELASEGTSGDRDVIDRQPDSRIRNEENCAPLPLLQATTLDGNNLQGSVTRDVPLESSFATAPGTRRTVSAIETSPPCGKVLAQCPAQWYLGRVKECLDCPGVWNGNLLLGADRLLTLAVVLTTTAENPSISVVSNAVFHVNPATQLEAFMDERRRGANGSFAVNAFVLRHLGLVWSSNLAYMRQIFLVMLSVLQVVIYCLFAISPGVIFVVFDYVLDSLIPDDLIELARGNRAFLCGLVAILYIFFMSVHARSARLQRWTVVAIYGFGVMIVLVGIGKLFKDVWMHSGTTFRHALVGDGVAMVPVANRAAVEVLFALYILYPLSTILYSPGSFLETVTGTFPYLMFLPTLLIGGGGYAVARAWDVLWGSRTDDTLVLDANSRSMQRNTWIITALVVSVNVAVVVVLESEHPLQSVIYGAYVAALLCGFILMVYSLIYFSYTAIVVALAAPFCALAFATECLVYCVWRLVRARDERYAALAEV* # PASA_UPDATE: g3670.t1, single gene model update, valid-1, status:[pasa:asmbl_7549,status:3], valid-1 NODE_46_length_50972_cov_42.9599 . gene 32896 36236 . + . ID=g3670;Name=g3670.t1 NODE_46_length_50972_cov_42.9599 . mRNA 32896 36236 . + . ID=g3670.t1;Parent=g3670;Name=g3670.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 32896 33012 . + . ID=g3670.t1.utr5p1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 32896 33456 . + . ID=g3670.t1.exon1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 33013 33456 . + 0 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 33604 34143 . + . ID=g3670.t1.exon2;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 33604 34143 . + 0 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 34448 34705 . + . ID=g3670.t1.exon3;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 34448 34705 . + 0 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 34886 35011 . + . ID=g3670.t1.exon4;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 34886 35011 . + 0 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 35184 35326 . + . ID=g3670.t1.exon5;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 35184 35326 . + 0 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 35455 35565 . + . ID=g3670.t1.exon6;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 35455 35565 . + 1 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . exon 35771 36236 . + . ID=g3670.t1.exon7;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . CDS 35771 36050 . + 1 ID=cds.g3670.t1;Parent=g3670.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 36051 36236 . + . ID=g3670.t1.utr3p1;Parent=g3670.t1 #PROT g3670.t1 g3670 MDIVEQMASAVPASLRREGESPALTRTGSAAAHVVLPPLAAAQAIPGLAASVALGVQTVQNSSISSVKEQSSSRDDAGGKKKKKSKKSKKGGDEREVARGEPGVNANDLIMGARLESTEHSLEEYKKIVVRLRRENAQLQHEMNQTEKDTIEVISFMRRESDKKDELIVKLQRQIREQRKEFDTEKETMAGTFQQRLSALDEAVSHKEEELGLAQQEMKVVKEFRKKRTAMQKELDRIKSQMGDVGRKHADTISRMEHKFFEEKVRLQKEANKKISELAEKAHEEAVSNLDETTKAVFKENVRLAEALRFHHQEGEELKKAKLLLMEQIRSLSEDRELNRGVVQEKIGQSQKQAQLIRELGEKVQTLEKSLSQVVKDFDAERRRLKDQTEIQLSELIATVDDLRRTLALKTKEMNHVKRLSRNILDQRTDLEQFFIDSLELVKKEIAGNRAQYKKEAAAAYNQQMRLATMRKNGQGFPAIRTFHPSATSTNSIFMDFSEAERRGYDIQGTAPRMDITDLTWEERERVLRIMFAKLNGTHIGGSGDGHGTLQHALANDVLEEQSMAGSNDDYDAGSSVAGDVSHAHPHAHAHAGALVPVGQHPGQPHHAANGGGGTFITQQGSGVTRPVAGALM* # ORIGINAL: g3661.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 888 1130 . + . ID=g3661;Name=g3661.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 888 1130 . + . ID=g3661.t1;Parent=g3661;Name=g3661.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 888 1130 . + . ID=g3661.t1.exon1;Parent=g3661.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 888 1130 . + 0 ID=cds.g3661.t1;Parent=g3661.t1 #PROT g3661.t1 g3661 MDFGSIEDVDVVDVVEEFDMRRCLDTEVDGAALSVGVTGRSESISRKKGMCDRMSFQTRNQPEEWQMEQCRMDSDGRAIP* # PASA_UPDATE: g3669.t1, single gene model update, valid-1, status:[pasa:asmbl_7542,status:12], valid-1 NODE_46_length_50972_cov_42.9599 . gene 28727 32565 . - . ID=g3669;Name=g3669.t1 NODE_46_length_50972_cov_42.9599 . mRNA 28727 32565 . - . ID=g3669.t1;Parent=g3669;Name=g3669.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 32427 32565 . - . ID=g3669.t1.utr5p1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 32334 32565 . - . ID=g3669.t1.exon1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 32334 32426 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 32133 32232 . - . ID=g3669.t1.exon2;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 32133 32232 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 31732 31883 . - . ID=g3669.t1.exon3;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 31732 31883 . - 2 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 31441 31634 . - . ID=g3669.t1.exon4;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 31441 31634 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 31133 31214 . - . ID=g3669.t1.exon5;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 31133 31214 . - 1 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 30857 30949 . - . ID=g3669.t1.exon6;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 30857 30949 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 30329 30432 . - . ID=g3669.t1.exon7;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 30329 30432 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 30031 30144 . - . ID=g3669.t1.exon8;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 30031 30144 . - 1 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 29661 29820 . - . ID=g3669.t1.exon9;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 29661 29820 . - 1 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . exon 28727 29267 . - . ID=g3669.t1.exon10;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . CDS 29016 29267 . - 0 ID=cds.g3669.t1;Parent=g3669.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 28727 29015 . - . ID=g3669.t1.utr3p1;Parent=g3669.t1 #PROT g3669.t1 g3669 MSAPNDVIEPTDSDEETVLPEASVRSKQLELMEKLTIEMQDEKAGLLIKDQKQFLGSVIPSVFTGVDMVDWLCKRMQFFDKNEAIHFAQKLYEAGYLFPVDYSTVKANDSVYRFQTPFFWPTRQWTGSDFDYAVYLQKRSMRDRRRHALQEYELDALVKLRKTLNPKWEFIMMQAEEQIKYAKARPRMEKRIYDSQERAFWHKHRPPPNTVDKAEVDPRKAFKQHDDTIHDGGKNVLKLGGNAHIITALERDVDAAKASLNRPRVKISVAVESLLNRGEIYCPFDAFLTTPEPSNPWISDDATAWEVSDKNKELPSVHTARRWGISLYELLTEPAGLRMFREFLRKEYSEENLKFWFACEEIKKVPQSRLKDEIAKIYNDYVAPSAQNEVNLNSTTRELTSKNVSSDMGYDTFDEAQKMIFRLMNKDSYPRFLRSDEYATLVKSPVK* # PASA_UPDATE: g3666.t1, single gene model update, valid-1, status:[pasa:asmbl_7541,status:3], valid-1 NODE_46_length_50972_cov_42.9599 . gene 21606 23182 . - . ID=g3666;Name=g3666.t1 NODE_46_length_50972_cov_42.9599 . mRNA 21606 23182 . - . ID=g3666.t1;Parent=g3666;Name=g3666.t1 NODE_46_length_50972_cov_42.9599 . five_prime_UTR 23103 23182 . - . ID=g3666.t1.utr5p1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . exon 23027 23182 . - . ID=g3666.t1.exon1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . CDS 23027 23102 . - 0 ID=cds.g3666.t1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . exon 22552 22835 . - . ID=g3666.t1.exon2;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . CDS 22552 22835 . - 2 ID=cds.g3666.t1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . exon 22183 22354 . - . ID=g3666.t1.exon3;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . CDS 22183 22354 . - 0 ID=cds.g3666.t1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . exon 21606 21901 . - . ID=g3666.t1.exon4;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . CDS 21870 21901 . - 2 ID=cds.g3666.t1;Parent=g3666.t1 NODE_46_length_50972_cov_42.9599 . three_prime_UTR 21606 21869 . - . ID=g3666.t1.utr3p1;Parent=g3666.t1 #PROT g3666.t1 g3666 MAPLFSHVVLVTLVVVALQGRTCSAVPPKSQSFGGKVDFTCLSTVDLSGGAVNIVKDAGSAELVCKTLLDDGSSLLSCGGRYVVENPAGGEELALAFKLDNTVDEANYIVARIESTGKVSIVFSKDDKGKDVVGQTAVFVDGPSEVAGSGGHYKSGIASTDSIVCRGALQPYFINVAGCSDRRRDLC* # ORIGINAL: g3674.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 46646 47053 . + . ID=g3674;Name=g3674.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 46646 47053 . + . ID=g3674.t1;Parent=g3674;Name=g3674.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 46646 47053 . + . ID=g3674.t1.exon1;Parent=g3674.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 46646 47053 . + 0 ID=cds.g3674.t1;Parent=g3674.t1 #PROT g3674.t1 g3674 MGRASRTRRGGRTQSTNTLLTIAIVSIVVVSLVHISITLYQLHSELTHDAEAHHASAHVGHVPGLVQKYEDELGEYDHEHMLISDDRVRSHGDGGRKMRDVEVVGSNCTVDCSVLIIRRRLTFRKSHALGSYNFC* # ORIGINAL: g3664.t1 original gene structure, not modified by PASA NODE_46_length_50972_cov_42.9599 AUGUSTUS gene 12152 18162 . + . ID=g3664;Name=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS mRNA 12152 18162 . + . ID=g3664.t1;Parent=g3664;Name=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 12152 12527 . + . ID=g3664.t1.exon1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 12152 12527 . + 0 ID=cds.g3664.t1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 12908 13010 . + . ID=g3664.t1.exon2;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 12908 13010 . + 2 ID=cds.g3664.t1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 13222 13464 . + . ID=g3664.t1.exon3;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 13222 13464 . + 1 ID=cds.g3664.t1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 13655 14692 . + . ID=g3664.t1.exon4;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 13655 14692 . + 1 ID=cds.g3664.t1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 14885 16358 . + . ID=g3664.t1.exon5;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 14885 16358 . + 1 ID=cds.g3664.t1;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS exon 16738 18162 . + . ID=g3664.t1.exon6;Parent=g3664.t1 NODE_46_length_50972_cov_42.9599 AUGUSTUS CDS 16738 18162 . + 0 ID=cds.g3664.t1;Parent=g3664.t1 #PROT g3664.t1 g3664 MDTEFVSGDGQSLKSAVKWMIRAREAGICVDLDTFAADLLAMRAKEGMSGAAARGDSEATAANALGDETSLAIPTKRKGVHRTLMSLSLGLVDWIHETGRGTAHPAYRAAIELGGKGASLLARHAEMAIFGNTQESSDARGALNAHFGGSFHHVMPMAASGAVLTLYNSHAPCARVVAAFAELCKAVPHPSRVSQAAITAVCESLRLNGSADDALEILRAVLASGGRLEYAPLRTMALCFRDQNNWVGVEDVLALMRVRFGGPSPILAACLRPPGIAAPLTQQAVQIPALTRHEWTPFRCPPPQYEFVPTGSYVKHFRYYEHRRAMHRTLSSVWNIEWWRRNANASLKMWEEECALMQLECDAEDAHARRLATERGARWDGRVATCWPAVATPDAPDVPPPHFTPDAALPWLALTFPEDLLGMRRESSTSGTDDSGSSRTSALLAEYVHSLVDAGDVPVALAYLHALPRPRLSARPSNSAEMVAGVLDDVIGVCCDIETGVRIRQPPRSAMDDAAGATRMADAVDAVAALSPIPSHVTSALEAEGLNGEKGNSDRCDAVPLLPAVSWPGTPNAYRDDWRALMDSIQRDVTSDQKAAALDAALCEHSQRLAPLFALPHIGVPTIGRAGESAAAGLGTWLEQHVTTMALRLLGAFVASRCDAATAESDFRWRISSIVDALHKVGVPVATPSVLSYVGMAAGVSHPARVADMLVETMLALPPRDPPAEEWLKIGPLLDHISLGGVNLSYAAHVLTNLFDTGRLLDSDTTSVYRRLRSLDDADEAKYPPNVPVVSRVIGFGALLRHVRPSAAIREFTSAGFAYQESKAGHKYGKLYRLRQLAIHGIFDSEVAHNIALTTPPVADVEGILHCAYTCRRPVPAEIVDRYYSIVGNSPDAVRWKELVSDFAAIGITISPPQTENVLDADAPAATTTVPPTAVPGAAVVLASPGAATTPAASSPDDPRASSLQVGAGRDARHSASGPLAWHDIVEPRRDVAIKMLSLMSSNPAAAKINAKRVIASWNYMRLFCGPLREGEVSTLLAMGVTFNNVCTLAQAVRDVDTVAALALAYALEGRPRDAMAALNSPVNAKRYSRVRDQIEYVAAARNVSGMQQFVRPTCGNAKDVSVRAVWSLYADSSTRDAPRGAFSSERLSMFRAARLTPLTADLLVSLLRTDVLAKDVERALPQLCVVATTVKHVWRDAVLGAVAAAELLAAGDRPHRVRAIQRARMWPTYVGRLAIDVCTEGLSPVRSSSSKSVLDTLANRLVDVATVFDVNGAPDAKMVVDVALASIARLRLPAAHVCDVLARVVHYVRAGRCAGLDVVKLLLEALQRDALSNSSGPLFVQECVRSPNLIFSPDTVAGGDAFVAHIALAHESLRLAVDLSVALGEGKATRLSLPPCVPAVPKGSTAPLRADWLHALVQSGIAFCVVKDEWTAIATAAGTPITAAVVPLAALYIREKIPIGAPLAVRTIMCRGGVSLPQLSAGAVAVETVARLCDSPSVRIHALALVRERQLTPDAHELFVRAIFASLSFVEYTSLASSIGVRGLQGGDASK* # ORIGINAL: g11285.t1 original gene structure, not modified by PASA NODE_1544_length_10566_cov_40.389 AUGUSTUS gene 8847 10345 . - . ID=g11285;Name=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS mRNA 8847 10345 . - . ID=g11285.t1;Parent=g11285;Name=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 10117 10345 . - . ID=g11285.t1.exon1;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 10117 10345 . - 0 ID=cds.g11285.t1;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 9788 9855 . - . ID=g11285.t1.exon2;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 9788 9855 . - 2 ID=cds.g11285.t1;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 9488 9604 . - . ID=g11285.t1.exon3;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 9488 9604 . - 0 ID=cds.g11285.t1;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 8847 9038 . - . ID=g11285.t1.exon4;Parent=g11285.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 8847 9038 . - 0 ID=cds.g11285.t1;Parent=g11285.t1 #PROT g11285.t1 g11285 MRGPVNALCVDELNGCVMIGCQDIIRVYDPAKHEVVQTNIGHTDSVRSILHIPERSQYVSCSWDRTIRIWNAYKGTETWKKIVETSDGERRIVVVKEQEHEPTFSELHPLVVPKILTKPGLLRDYLLKTDYPDKSPSPGAGPGPRAVFLPQGTPGRFVRVSNKPATKAAKTIRLDPLPILKKRGSKPLISLAPTAGQSATQ* # ORIGINAL: g11283.t1 original gene structure, not modified by PASA NODE_1544_length_10566_cov_40.389 AUGUSTUS gene 89 2565 . - . ID=g11283;Name=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS mRNA 89 2565 . - . ID=g11283.t1;Parent=g11283;Name=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 2485 2565 . - . ID=g11283.t1.exon1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 2485 2565 . - 0 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 2298 2365 . - . ID=g11283.t1.exon2;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 2298 2365 . - 0 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 1863 2027 . - . ID=g11283.t1.exon3;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 1863 2027 . - 1 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 1497 1572 . - . ID=g11283.t1.exon4;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 1497 1572 . - 1 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 851 1092 . - . ID=g11283.t1.exon5;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 851 1092 . - 0 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 487 616 . - . ID=g11283.t1.exon6;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 487 616 . - 1 ID=cds.g11283.t1;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS exon 89 218 . - . ID=g11283.t1.exon7;Parent=g11283.t1 NODE_1544_length_10566_cov_40.389 AUGUSTUS CDS 89 218 . - 0 ID=cds.g11283.t1;Parent=g11283.t1 #PROT g11283.t1 g11283 MSNWNRDWLEDAVLDDDGWPTSTSEHQKEVEDSVERIYKEWICKADWQTSLKLLREEHSKYLLSGLLKLRASMAALDASRPWLCYWILHALDLIGASIPTPLVERCAAFLLRCQSPTGGFGGGPGQLSHLAPTYASINALAILGSAAGYAGVDRDALVAWMMRLRLPCGAFRMHEDGEEDVRGAYCAASVAAMLNLDAPGLFDGTAEWIASCQTYEGGYGAVPFMEAHGGYTFCAVAGLILLGREDLVRMDDLTRWIVNRQMSLEGGFQGRTNKLVDGCYSFWQGGTFPLLRDILKR # PASA_UPDATE: g11284.t1, single gene model update, valid-1, status:[pasa:asmbl_1922,status:3], valid-1 NODE_1544_length_10566_cov_40.389 . gene 4241 8365 . + . ID=g11284;Name=g11284.t1 NODE_1544_length_10566_cov_40.389 . mRNA 4241 8365 . + . ID=g11284.t1;Parent=g11284;Name=g11284.t1 NODE_1544_length_10566_cov_40.389 . five_prime_UTR 4241 4376 . + . ID=g11284.t1.utr5p1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 4241 4553 . + . ID=g11284.t1.exon1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 4377 4553 . + 0 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 4795 4859 . + . ID=g11284.t1.exon2;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 4795 4859 . + 0 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 4973 5398 . + . ID=g11284.t1.exon3;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 4973 5398 . + 1 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 5659 6543 . + . ID=g11284.t1.exon4;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 5659 6543 . + 1 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 6755 6853 . + . ID=g11284.t1.exon5;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 6755 6853 . + 1 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 7160 7247 . + . ID=g11284.t1.exon6;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 7160 7247 . + 1 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 7450 7809 . + . ID=g11284.t1.exon7;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 7450 7809 . + 0 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 8010 8052 . + . ID=g11284.t1.exon8;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 8010 8052 . + 0 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . exon 8297 8365 . + . ID=g11284.t1.exon9;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . CDS 8297 8343 . + 2 ID=cds.g11284.t1;Parent=g11284.t1 NODE_1544_length_10566_cov_40.389 . three_prime_UTR 8344 8365 . + . ID=g11284.t1.utr3p1;Parent=g11284.t1 #PROT g11284.t1 g11284 MAARALFRVLVVVVAVACANSVTTDDDEGDDVAIELTPKMFDKTVIQSPDDWLVFFHHQRCVHCVTLAPHVEMAAKKLKGRVKVGILDGTAHMDFIKGAGITEFPKIRLFLAGKKPFFDDLPGWRSAEEEKWSQLVGYVDAKLEEIRAARRHRNKARFEEPTVVDAKDLLPQEVVQLTGMDVWQSTCKRFTQHCVVVALPPIADGGDLMRTSYLSVLEALATKVAQRPEIRIVWFEGGEQPHLESAVGFTYGYPALSMVHVNRGISIGYVGTYRASDIGDFVERVVLGQEKMRAITLPRIPKILSTLPGAINDATDDDEPTSDAAAPAESEDTVDKPNAPDNASSSSLPEDVAQESKPKTSSEPSSSAGKKKTGTGSTTSNTAKGGKATGAQSKGKTGTAKAGTRAGKATGAKTGTAKAGTKAGKRKETAEGQGQAASQSASEKKDYAERNGQSDAIGGKPKGSEQATWGERPSGKDGEEASESDQWVKFEDVLEDMSKDYEAQLDDTLGRYDDMLDRWSSDMKKHGIPEMETKGPSAEEIDEYLNNDEPPPKVVIPDFSAEREEYEKILDTIRSADMSRKALMKEAESLRDVLKGRDGATADVLELTEILKTMSTNKDDALRDEYDDDEDDEPYERVAPKGGKKETEKEKWDRLKMNMKDDPDAFKKLGLDQSLEELQGLQSQFASVKDTIPAMKDLLKQMEGTLSKLQAERGAKAGDDDDEDIDADD* # ORIGINAL: g2575.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 7217 8059 . + . ID=g2575;Name=g2575.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 7217 8059 . + . ID=g2575.t1;Parent=g2575;Name=g2575.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 7217 8059 . + . ID=g2575.t1.exon1;Parent=g2575.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 7217 8059 . + 0 ID=cds.g2575.t1;Parent=g2575.t1 #PROT g2575.t1 g2575 MAQVLQCDADTIPQGEHNAKVKMGQILPRPATAIQLADHNANAIMRHVNKWLEKFLKTISASARESHVQMSNELFTYLKHCIVVLQIEEECFATINFAKYPVEFREMFAWLVGVPVRSQFGLARVYFRKRFFIELSHCLFQMGIGAPRVCKFVCEGRLTGCDGKCNEIHSWNACGRDGPIDGVGFNRGHANCLGCIKHNVLEMLSPYATPNADVHSPSACPISAASHCTGEIICIPCFELSTGMFNHADKAALTELWIRLSGTVHHSHEKHSWDEIREFI* # ORIGINAL: g2576.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 10476 10994 . - . ID=g2576;Name=g2576.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 10476 10994 . - . ID=g2576.t1;Parent=g2576;Name=g2576.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 10476 10994 . - . ID=g2576.t1.exon1;Parent=g2576.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 10476 10994 . - 0 ID=cds.g2576.t1;Parent=g2576.t1 #PROT g2576.t1 g2576 MRAMASLAPLSAKTEMDQAIEFAKQFESAASAEKVKETEAFLAKMKALDKLGEAARVLVFYLVEEIQSVLADPALSKQQSIVLERYSEMLAGGESIKKHRVDSLHKLNKGPIQPFCFVQKLFKEKGIDLQEVTPNTVTVFRMQQPPKTSTQPVQPKRNTGGQWRRDYFKPDY* # ORIGINAL: g2577.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 17476 18460 . + . ID=g2577;Name=g2577.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 17476 18460 . + . ID=g2577.t1;Parent=g2577;Name=g2577.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 17476 17717 . + . ID=g2577.t1.exon1;Parent=g2577.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 17476 17717 . + 0 ID=cds.g2577.t1;Parent=g2577.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 17806 18460 . + . ID=g2577.t1.exon2;Parent=g2577.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 17806 18460 . + 1 ID=cds.g2577.t1;Parent=g2577.t1 #PROT g2577.t1 g2577 MEPATAGSSDFRENAATWAMRRKERHQRLSAVTLDGVCELIAGCGPSSVVVLFGAGVSTSAGIQDFRSPAGAYSDATFSERAVGQIAARQSLPAAHQFLRDLHSAGKLRHVYTQNVDGLEKVAGVPDELVVQMHGSVHGAGVIALYGEPARASAGQMRADVAGVSRQPAVLIIAGTTLTTEPAASIPRMLCRHVPRVYINRECPPALLADWKESVARKHSRFVFDRPWNYRDVLYEGDCDAAFERLGPGTRERVRLTTVSALFESVQGFFSHKDKERGQVLFFLLRGNTGEFFALAPF* # ORIGINAL: g2581.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 26843 27190 . + . ID=g2581;Name=g2581.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 26843 27190 . + . ID=g2581.t1;Parent=g2581;Name=g2581.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 26843 27190 . + . ID=g2581.t1.exon1;Parent=g2581.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 26843 27190 . + 0 ID=cds.g2581.t1;Parent=g2581.t1 #PROT g2581.t1 g2581 MLCSKTVLGKDIMIKTDSMLCSKTVLRKKRMIKTDSLMFSKTVLGKDRLIKAVMFSKTVPVVQIDQDRSLMVSKNVSGKDRMIKTDSLMVSKTMLAKDRLIETDSLLCSKTVLHN* # ORIGINAL: g2574.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 354 1733 . + . ID=g2574;Name=g2574.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 354 1733 . + . ID=g2574.t1;Parent=g2574;Name=g2574.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 354 1733 . + . ID=g2574.t1.exon1;Parent=g2574.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 354 1733 . + 0 ID=cds.g2574.t1;Parent=g2574.t1 #PROT g2574.t1 g2574 MEQINASFQGMLGPDFDAVCYEFNPDSLAALIADFHQWETAPVSSAPIGTSAPNDDSGFINARTLQMEQINADIDALFQRTLGPDFDDACSEFNAETLTALIADFYQSEPASVSSAPIGTSAPIDDSGFINSRTLQMEQINADIDALIQRTLGPDFDDVCSEFTPDSLTALIADFYQSETAPVSSAPVVTSAPIVSDTLPTDEILRLETKAKSVRETLPEVMAMRTPACMRTVDDDAPIEADMSEQATTMPSQMPTERDASRITVGPFSFGPGDAVMIKGDDHNMCEQPALVSDIKTDRMSGDRLVVVEWLYEPSQFVLEFPQSKDCFSKQELFRSNHVQTVHVNTVIGPCHMQTILGHMRSEPSRRQFFTRTGIRIRRNKPAVLSRVGKISCVGCRKIVNPDKASDDEDNIVLCTKCNRVSHVKCIEQRRALRPSPTYKSKFSTRFCCESEKYHLADE* # ORIGINAL: g2579.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 20333 20766 . + . ID=g2579;Name=g2579.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 20333 20766 . + . ID=g2579.t1;Parent=g2579;Name=g2579.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 20333 20431 . + . ID=g2579.t1.exon1;Parent=g2579.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 20333 20431 . + 0 ID=cds.g2579.t1;Parent=g2579.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 20611 20766 . + . ID=g2579.t1.exon2;Parent=g2579.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 20611 20766 . + 0 ID=cds.g2579.t1;Parent=g2579.t1 #PROT g2579.t1 g2579 MKAHDGLSNMIELNERGVSWKLVRSSGIVDDYQMMVAFSNGLRVFAVGDCICGQQRFVDELLNANNVAGTRAKVESSNTLNPRY* # ORIGINAL: g2578.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 18879 20080 . - . ID=g2578;Name=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 18879 20080 . - . ID=g2578.t1;Parent=g2578;Name=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 20027 20080 . - . ID=g2578.t1.exon1;Parent=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 20027 20080 . - 0 ID=cds.g2578.t1;Parent=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 19372 19776 . - . ID=g2578.t1.exon2;Parent=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 19372 19776 . - 0 ID=cds.g2578.t1;Parent=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 18879 19265 . - . ID=g2578.t1.exon3;Parent=g2578.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 18879 19265 . - 0 ID=cds.g2578.t1;Parent=g2578.t1 #PROT g2578.t1 g2578 MSHATRAQSKPRTLMAAANELFILGDFAKGVAALIYQLKPIEIDGLQDVEFVDVLVAILEAQSAILKGMGYTEPAERKSSVFITSASTDDKMSFHVTFDDIVFNNHAEHILFVKWLKLKFQSDHTPSSFNSWAGAQLESLDENRVDDQVQRGEVGVGGRASHLRSQAQEPQTDGSAKKTTKQSTQTRLEPALWMLNEPDAVEIADINGQYVNLRRISASHCGVCQRVHENVGISLRCNEKTNMCYLMCFSQHGKWIPLGPADSGMMNLDRPMQQGSAPARR* # ORIGINAL: g2580.t1 original gene structure, not modified by PASA NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS gene 21033 24136 . + . ID=g2580;Name=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS mRNA 21033 24136 . + . ID=g2580.t1;Parent=g2580;Name=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 21033 21809 . + . ID=g2580.t1.exon1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 21033 21809 . + 0 ID=cds.g2580.t1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 22055 22425 . + . ID=g2580.t1.exon2;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 22055 22425 . + 0 ID=cds.g2580.t1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 22685 23264 . + . ID=g2580.t1.exon3;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 22685 23264 . + 1 ID=cds.g2580.t1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 23374 23538 . + . ID=g2580.t1.exon4;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 23374 23538 . + 0 ID=cds.g2580.t1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 23688 23932 . + . ID=g2580.t1.exon5;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 23688 23932 . + 0 ID=cds.g2580.t1;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS exon 24073 24136 . + . ID=g2580.t1.exon6;Parent=g2580.t1 NODE_251_length_29197_cov_22.1913_potentialcontaminant AUGUSTUS CDS 24073 24136 . + 1 ID=cds.g2580.t1;Parent=g2580.t1 #PROT g2580.t1 g2580 MATTVIVRAESESGAFGKSEFARPFLDFIDNVRAKVGAELAKEIKLPSICVVGAQSSGKSALLQSLSGIKLPSGGGMVTKMALMLQIRELPGSLDSKEEYAEICVPNDDKYGKKSRISIDEVAGEIENITKAVVGHKSIEKERLINVTVYRRGQLCELTLIDLPGLTHAEGYGDDVREMVENYARQTECVMLVVVNATTDVDASEAPKLARTHDEDGSRTVTVLTQCDLLVADETRMAHVARNLFAANTPGGNKGGMFAIVNTTKDGGARTITIPAADSFFSENRAFQSSGTRTKCGLANLVHHLERIQGEQIRRVLPETFRLLIEAQAVAEEELLALPAAFEDDTSRVAFVQAKFRNLADLLTNLTTNSVAGVPIDMTDEKRKDLKLNKHINESNKAFEMAVGKRYSGRHFFSSEMFVKMRTHATEMRSTELSNIISNSAFVSAFHEEFRWLASKGAKRIVEGRVPTVPGKAEDDGSGPCYQLLRMRLAFLRRFLPTVVDTSAMNDFPSLKNRTTQLLLDVLQHRVKDVERQLDEYLSQEQQMPFTLNHYYMDTVKKIGEKWREQKHAYETAKAAHQRAVLPGTSHAQHPAQKLAFASENFYVNDEVYDAPNPTLYEAVSNDDQAAIDMLINMQAYCKVMLKRVVDFVPMMLRDHLVVRLEKEVKTALDAMVTNEREDIIKRLTLEMPEVALRRRLAKERIESVKYVIDMARQNQSLQDMLAMSTSAMFGAN* # ORIGINAL: g3896.t1 original gene structure, not modified by PASA NODE_4540_length_1482_cov_36.6851 AUGUSTUS gene 138 287 . + . ID=g3896;Name=g3896.t1 NODE_4540_length_1482_cov_36.6851 AUGUSTUS mRNA 138 287 . + . ID=g3896.t1;Parent=g3896;Name=g3896.t1 NODE_4540_length_1482_cov_36.6851 AUGUSTUS exon 138 287 . + . ID=g3896.t1.exon1;Parent=g3896.t1 NODE_4540_length_1482_cov_36.6851 AUGUSTUS CDS 138 287 . + 0 ID=cds.g3896.t1;Parent=g3896.t1 #PROT g3896.t1 g3896 HFVYFVTMAIAWLVPDIPKRVKKALKRQEQEARLALEGIALHETQLGYK* # PASA_UPDATE: g12515.t1, single gene model update, valid-1, status:[pasa:asmbl_2449,status:12], valid-1 NODE_1723_length_9514_cov_40.9222 . gene 262 2760 . - . ID=g12515;Name=g12515.t1 NODE_1723_length_9514_cov_40.9222 . mRNA 262 2760 . - . ID=g12515.t1;Parent=g12515;Name=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 2423 2760 . - . ID=g12515.t1.exon1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 2423 2760 . - 0 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 1980 2220 . - . ID=g12515.t1.exon2;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 1980 2220 . - 1 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 1584 1673 . - . ID=g12515.t1.exon3;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 1584 1673 . - 0 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 1208 1314 . - . ID=g12515.t1.exon4;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 1208 1314 . - 0 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 969 1071 . - . ID=g12515.t1.exon5;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 969 1071 . - 1 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 674 789 . - . ID=g12515.t1.exon6;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 674 789 . - 0 ID=cds.g12515.t1;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . exon 262 366 . - . ID=g12515.t1.exon7;Parent=g12515.t1 NODE_1723_length_9514_cov_40.9222 . CDS 262 366 . - 1 ID=cds.g12515.t1;Parent=g12515.t1;3_prime_partial=true #PROT g12515.t1 g12515 MSHLQNQPQLSVHPPPPSPTKPRVVMSIGPPNESDDDYFDEGANGFGGNGLPYLEGTLSKWTNYLNGWQDRWIVLQNGILSYFKSETDMSYGCRGSMSLKEAIIVPHEYDELRFEVSLQDNVYYMRTASKEERDQWVESLEQTKTALIETASVGSTGSLRRKGSSSSLASLKSKTLRDRLSELEAYKDILTKQVDALQRLLDDHPLAQSKEDPDYREDSLTFKATALGMIEALSRSVEMMGRREEETQRRIESEVERRRKLELELANARAARRQSVGRFGAPDLEEGPHSQLKEEEFYDALDAAYEKTQQHEEEKLKSQTLMPPDSKRGQHRFATEVDESVTNSLKHIASDQESQWEITHEEGDLK # PASA_UPDATE: g12516.t1, single gene model update, valid-1, status:[pasa:asmbl_2451,status:3], valid-1 NODE_1723_length_9514_cov_40.9222 . gene 3653 6850 . + . ID=g12516;Name=g12516.t1 NODE_1723_length_9514_cov_40.9222 . mRNA 3653 6850 . + . ID=g12516.t1;Parent=g12516;Name=g12516.t1 NODE_1723_length_9514_cov_40.9222 . five_prime_UTR 3653 3812 . + . ID=g12516.t1.utr5p1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 3653 4692 . + . ID=g12516.t1.exon1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 3813 4692 . + 0 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 4931 5064 . + . ID=g12516.t1.exon2;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 4931 5064 . + 2 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 5198 5237 . + . ID=g12516.t1.exon3;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 5198 5237 . + 0 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 5419 5624 . + . ID=g12516.t1.exon4;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 5419 5624 . + 2 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 5950 6045 . + . ID=g12516.t1.exon5;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 5950 6045 . + 0 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 6219 6367 . + . ID=g12516.t1.exon6;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 6219 6367 . + 0 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . exon 6612 6850 . + . ID=g12516.t1.exon7;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . CDS 6612 6669 . + 1 ID=cds.g12516.t1;Parent=g12516.t1 NODE_1723_length_9514_cov_40.9222 . three_prime_UTR 6670 6850 . + . ID=g12516.t1.utr3p1;Parent=g12516.t1 #PROT g12516.t1 g12516 MRSGIALLAQQSAYTSSVATSATTSHVSAAIKSSFSQLRTVCVAPVVARVGAASVAVSASIVHRHVITSPARPVFLVARLWTHARANVACRIAHTPSHISVVATSLKACIAPLGWKTYSSGASPAARPIMAREFSSWRRTSAGESDSQAGAGAKQGPWSASGRASFRLAIIGAHLQAALALADHVHCEGQQTSFFHSWGASPKEAKSSESSPSAAGGDGVAAQSDKASSSGGLVGAYPTKLRLETAVSCQAKADDPPSQRKRPVVVDVLPAHKRCECGEDAFFVTETKKTSFIGVADGVGGWRSMGVDPSEFAWALMINSEKAALEKDEALPKEILALAYAKLLEEKKVLAGSSTATILALDKASGIATATNMGDSGFIVMRDGAFFGESKEQQHYFNCPYQLSVVPQSSGVVKQDKVSMADMYRFQLHAGDIIVMATDGLLDNMFTGEIEEVITHVSEKGGSLKEIADAIVSRAETYSHDANRMTPFARAAQQAKVFHRGGKVDDITVIVAKVVPDVSA* # ORIGINAL: g12517.t1 original gene structure, not modified by PASA NODE_1723_length_9514_cov_40.9222 AUGUSTUS gene 6904 8516 . - . ID=g12517;Name=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS mRNA 6904 8516 . - . ID=g12517.t1;Parent=g12517;Name=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 8480 8516 . - . ID=g12517.t1.exon1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 8480 8516 . - 0 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 8293 8352 . - . ID=g12517.t1.exon2;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 8293 8352 . - 2 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 8013 8143 . - . ID=g12517.t1.exon3;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 8013 8143 . - 2 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 7788 7899 . - . ID=g12517.t1.exon4;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 7788 7899 . - 0 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 7473 7618 . - . ID=g12517.t1.exon5;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 7473 7618 . - 2 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 7237 7290 . - . ID=g12517.t1.exon6;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 7237 7290 . - 0 ID=cds.g12517.t1;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS exon 6904 7029 . - . ID=g12517.t1.exon7;Parent=g12517.t1 NODE_1723_length_9514_cov_40.9222 AUGUSTUS CDS 6904 7029 . - 0 ID=cds.g12517.t1;Parent=g12517.t1 #PROT g12517.t1 g12517 MPPKKQKGGDDEGAAETVIFDYLNKQNRPYSAIDIFNNLHGKVGKTAVVKALASLAASDRIREKEKGKSKIYVIKQDSFPAATEGELDELDKEMERLKAANAEAVQQVRALESELRELQSSLTTEGLAARLKDIEAQNEKNERRVEMLKSGTKLVSKEEREQVYKKLTDALAQYKKRKRLCTDISDTILENVQKRKKEFFEEIGIETEEDRKIDTTMLTAS* # ORIGINAL: g9596.t1 original gene structure, not modified by PASA NODE_3741_length_2859_cov_41.1979 AUGUSTUS gene 135 2777 . - . ID=g9596;Name=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS mRNA 135 2777 . - . ID=g9596.t1;Parent=g9596;Name=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS exon 1615 2777 . - . ID=g9596.t1.exon1;Parent=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS CDS 1615 2777 . - 0 ID=cds.g9596.t1;Parent=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS exon 1157 1235 . - . ID=g9596.t1.exon2;Parent=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS CDS 1157 1235 . - 1 ID=cds.g9596.t1;Parent=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS exon 135 908 . - . ID=g9596.t1.exon3;Parent=g9596.t1 NODE_3741_length_2859_cov_41.1979 AUGUSTUS CDS 135 908 . - 0 ID=cds.g9596.t1;Parent=g9596.t1 #PROT g9596.t1 g9596 ELDLSNTQRTVHNLLPEIEQLVNLTSLDLSRNELTNVPDAIFNLGRLRRLNLADNRLVHVPHGVSQLSALESLVIARNQLVDVTPMISECTRLRRLVLNDNSIQALPDAFAQMTLIETLSLKRNKLRTLPASVCGCGSLRRLILSSNCLETLPSEIYQMTKLTEFDITDNAHLQMPPHPRKGPAVDQEGLNVDFEDAETRGKQVAASRNYAARGQDNEAETRGIKRAHSIRTHTLKRGDTVGDGAGAGDGSDKVLQGLKDVAEKGREAASEFGGEAIRTRRKWDQMLEKPDMDYGELFGDDAGHAPGVTVWRIENFVPVLVEAQMHGKFYQGDAYVVLHTTEGGEDGSAAGGLRWQIHFWIGNDATLDKKACSAIHAVNLRNFLGAQGMAVREEQMDESDEFLACFNHDVQYIDGGTESGFFETDKSVHVNRLYWVTGDRTVRIELVKLSANSLDSTGVFVLLTEKKIFVWCGASSRSLLRSKARLMAEKINRTERNNKCDTIETGEGSEPASFWEGIGSRPSGSIAAQPTHQPGLTCRLCVWPILYRVTLGRGFLELPQVDLPDKKLCQSVLDSGGVYVLDCGSELFVWVGRKSSRIVRAAAVRLLEDLTTLIPRPAYASYARVLELAEPAVFKARFEGWDDVVPVDFSSEAKKPIVLTVRQKMDRVNPAE # ORIGINAL: g3035.t1 original gene structure, not modified by PASA NODE_9114_length_343_cov_38.1604_potentialcontaminant AUGUSTUS gene 2 343 . + . ID=g3035;Name=g3035.t1 NODE_9114_length_343_cov_38.1604_potentialcontaminant AUGUSTUS mRNA 2 343 . + . ID=g3035.t1;Parent=g3035;Name=g3035.t1 NODE_9114_length_343_cov_38.1604_potentialcontaminant AUGUSTUS exon 2 343 . + . ID=g3035.t1.exon1;Parent=g3035.t1 NODE_9114_length_343_cov_38.1604_potentialcontaminant AUGUSTUS CDS 2 343 . + 0 ID=cds.g3035.t1;Parent=g3035.t1 #PROT g3035.t1 g3035 VSAADTVVLDIRGTNISSTSAGLNGGVFSIIDGASVSLATVAVTDVISASNGGFASLIPIAGSARIPYIVADSLTIDGATAAVHGGAFFTSGAQLRITRSSFRGIAAGGSGGFA # ORIGINAL: g2714.t1 original gene structure, not modified by PASA NODE_5977_length_666_cov_116.112_potentialcontaminant AUGUSTUS gene 2 609 . + . ID=g2714;Name=g2714.t1 NODE_5977_length_666_cov_116.112_potentialcontaminant AUGUSTUS mRNA 2 609 . + . ID=g2714.t1;Parent=g2714;Name=g2714.t1 NODE_5977_length_666_cov_116.112_potentialcontaminant AUGUSTUS exon 2 609 . + . ID=g2714.t1.exon1;Parent=g2714.t1 NODE_5977_length_666_cov_116.112_potentialcontaminant AUGUSTUS CDS 2 609 . + 2 ID=cds.g2714.t1;Parent=g2714.t1 #PROT g2714.t1 g2714 LTFSSLSENSATTCSSASTSWTVLAPLLSIYRRASPATLLSMPLYIRPVQSCSRAATKQSSTSVPRSSTRQRHGRTTPLTQSSVSLTPTQLRHSDYTLQQDPPTCATALHKLWSSTPLPRTCTYLVALHLDDSTAPNWTSLQHPLARTIRRTVLATKMRRHPHRRHPFLPLPPHHPPTTDVSPPPPAPTDTPPPPVRAPSSR # ORIGINAL: g3448.t1 original gene structure, not modified by PASA NODE_1460_length_11157_cov_36.8582 AUGUSTUS gene 1 2862 . - . ID=g3448;Name=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS mRNA 1 2862 . - . ID=g3448.t1;Parent=g3448;Name=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS exon 2199 2862 . - . ID=g3448.t1.exon1;Parent=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS CDS 2199 2862 . - 0 ID=cds.g3448.t1;Parent=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS exon 1484 1941 . - . ID=g3448.t1.exon2;Parent=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS CDS 1484 1941 . - 2 ID=cds.g3448.t1;Parent=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS exon 1 1195 . - . ID=g3448.t1.exon3;Parent=g3448.t1 NODE_1460_length_11157_cov_36.8582 AUGUSTUS CDS 1 1195 . - 0 ID=cds.g3448.t1;Parent=g3448.t1 #PROT g3448.t1 g3448 MRSMKAAIVVFSLAIVVFRFADAIPVAQFPRSQGDVKWPQSSFRPRVDVNARALEILNNHKCAHDLLEPQPSLVSPQEYGSSDRRRDAVAATTWSPLRISFSVGPKPLTALTATQSNYLLNTIIPLAIGRFTSSLLTIPVSGNLTFSRPCNSAFTSLPPSVPADLYCYEHQSPIMCNRFFEIPTDHIAPSFDCDYTAPGVDFSQPLKYCKAQPSGAGIPNSDLHLYITADNSICGATVVAQATSCIQDQMDRPVAGYVNMCPLSYDLLDPKQSSIVLEGIVSVLRHEITHVLAMSSSLFPFFRDEFGNPRTARNRFGYPPIDPSTSYYSVGASTVASFVENGKTASKIVTPAVLRAVRKHFNCTSLNGAELEDQGSGGTAGSHWEQRVFFTEYMQGTTAGREVSEVTFALFEDSGWYRASDTCVPDPLTFGYKKGCAFAVGKCGGASDPVTFCSYDPSVSGCTPAMVAQGKCHDACSPDGLAISNCFNTGLADNCPVYSAYANGDCRDAGNTVSLGYYAGSYRGSVLEQSSRCMMSTLMQDIYSPMSNVYPGCYKTECVGNGTSTALVIIIDGDRYTCSKEGQEISVQGYTGTLYCPRVSTICPMNDCTTDSAIALAVVAARASASSKAAATVSARATPGSTQAVAASIESAKAAASIESAKAAVSSRMGAASAATSAAQVSASIWSAQSAATQAIQVSAAQAATSAAQLSVSASQAASIESAKAAVSLRMGAASAATSAAQVSASIWSAQSAATQAIQASAAPAATSAAQL # PASA_UPDATE: g3449.t1, single gene model update, valid-1, status:[pasa:asmbl_1671,status:3], valid-1 NODE_1460_length_11157_cov_36.8582 . gene 4853 11154 . + . ID=g3449;Name=g3449.t1 NODE_1460_length_11157_cov_36.8582 . mRNA 4853 11154 . + . ID=g3449.t1;Parent=g3449;Name=g3449.t1 NODE_1460_length_11157_cov_36.8582 . five_prime_UTR 4853 4946 . + . ID=g3449.t1.utr5p1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 4853 4948 . + . ID=g3449.t1.exon1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 4947 4948 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 5216 5379 . + . ID=g3449.t1.exon2;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 5216 5379 . + 1 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 5572 5675 . + . ID=g3449.t1.exon3;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 5572 5675 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 5798 5915 . + . ID=g3449.t1.exon4;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 5798 5915 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 6180 6293 . + . ID=g3449.t1.exon5;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 6180 6293 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 6591 6688 . + . ID=g3449.t1.exon6;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 6591 6688 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 6924 7038 . + . ID=g3449.t1.exon7;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 6924 7038 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 7328 7406 . + . ID=g3449.t1.exon8;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 7328 7406 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 7629 7770 . + . ID=g3449.t1.exon9;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 7629 7770 . + 1 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 7928 8008 . + . ID=g3449.t1.exon10;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 7928 8008 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 8272 8396 . + . ID=g3449.t1.exon11;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 8272 8396 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 8617 8681 . + . ID=g3449.t1.exon12;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 8617 8681 . + 1 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 8905 9027 . + . ID=g3449.t1.exon13;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 8905 9027 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 9214 9324 . + . ID=g3449.t1.exon14;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 9214 9324 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 9447 9575 . + . ID=g3449.t1.exon15;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 9447 9575 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 9798 9867 . + . ID=g3449.t1.exon16;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 9798 9867 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 10105 10163 . + . ID=g3449.t1.exon17;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 10105 10163 . + 1 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 10369 10568 . + . ID=g3449.t1.exon18;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 10369 10568 . + 2 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . exon 10906 11154 . + . ID=g3449.t1.exon19;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . CDS 10906 11040 . + 0 ID=cds.g3449.t1;Parent=g3449.t1 NODE_1460_length_11157_cov_36.8582 . three_prime_UTR 11041 11154 . + . ID=g3449.t1.utr3p1;Parent=g3449.t1 #PROT g3449.t1 g3449 MPATEVLHPTTATSAEKMVSAKAAPVHVKWTPQSPEKTVIFQFMSVVNAKYSLNLRTYNELWQWSVDKYADFWATFWDFSEIVHSQPYEQVVDATKRMDEIPEWFKGSRLNFAENLLRYNDDSIALIGTGEGKAPAVKVTYRQLNERVARAASALRQAGVTIGDRVVGYIPNCIEAVELMLAVTSIGAIWSSTSPDFGITGVLERFSQINPKLIFSVNAVHYNGKVHDHMGKLHKVVDGLGDLERVVIIPFVESVPIDLASIPKAELYDTFLSLSEPDPALKFEQLPFNHPLYVMFSSGTTGVPKCMVHSAGGTLIQHLKEHRLHADLSRSDVLFYYTTTGWMMWNWLVSGLASGATVVLYDGSPFIPTPVTLWDLSDEIGITIFGTGAKWLAALEDKHIHPIETHKLTSIRTILSTGSPLKPESFDYVYTHIKKDVLLGSITGGTDIISCFAGSNPAVPVIRGEIQSRNLGMKMESWDEGAHPVFDESGELVCTVPFPSMPVSFWNDADGSKYRSAYFGKYDGVWAHGDFVQISSATGGIWMLGRSDGTLNPAGVRFGSAEIYHVVEPFPEIADSLCVSQKMGADERVILFVLMNAGHEFNDQLKKRVAHAIREQLSARHVPAIIMQTTAIPYTINGKKVEVAVKRIIAGEKVLNRASLANPESLDLYASIPQLAL* # ORIGINAL: g10025.t1 original gene structure, not modified by PASA NODE_1570_length_10438_cov_59.2289 AUGUSTUS gene 1535 2005 . - . ID=g10025;Name=g10025.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS mRNA 1535 2005 . - . ID=g10025.t1;Parent=g10025;Name=g10025.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 1535 2005 . - . ID=g10025.t1.exon1;Parent=g10025.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 1535 2005 . - 0 ID=cds.g10025.t1;Parent=g10025.t1 #PROT g10025.t1 g10025 MPAQCLRQSQQHLDVPVLLLAAARVISVALMHTLTVVLADINALCGTRVDASAACVAAGCAASTLSLAAACAALAMDASAACVAAGCATSTLSLAPALPGCAALAMDASAACVAVGCACCLNAFTRAGGCLCCTRNGRLRCLPRDSVAQSLYWRMT* # ORIGINAL: g10027.t1 original gene structure, not modified by PASA NODE_1570_length_10438_cov_59.2289 AUGUSTUS gene 3550 5322 . + . ID=g10027;Name=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS mRNA 3550 5322 . + . ID=g10027.t1;Parent=g10027;Name=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 3550 3690 . + . ID=g10027.t1.exon1;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 3550 3690 . + 0 ID=cds.g10027.t1;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 3969 4053 . + . ID=g10027.t1.exon2;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 3969 4053 . + 0 ID=cds.g10027.t1;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 4261 4485 . + . ID=g10027.t1.exon3;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 4261 4485 . + 2 ID=cds.g10027.t1;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 4746 4807 . + . ID=g10027.t1.exon4;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 4746 4807 . + 2 ID=cds.g10027.t1;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 5035 5322 . + . ID=g10027.t1.exon5;Parent=g10027.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 5035 5322 . + 0 ID=cds.g10027.t1;Parent=g10027.t1 #PROT g10027.t1 g10027 MTKIQVASKHVVDTLQQRLMREVDNHMQTRSSWTHKQRRHFKARMSEVSEAMFKAIHENVQIGGMDWDVAEKSGEGMEPVSEAAQMQLTNLLVEVNTLIVDVAAKRKSIPAEVEALVQKSIESQNDADTACAPSVLLSPADASASGTSIEDLERVLTIWQESMGMLASIRKSMPEVVHRARRIAKVAELGPKLDASTTENVIREPAPKVALSTPASAAISQETAAGVNNENSTVSQSSPAQLQSPLRRSARRSMIKNLRAVPPYMR* # PASA_UPDATE: g10024.t1, single gene model update, valid-1, status:[pasa:asmbl_2008,status:12], valid-1 NODE_1570_length_10438_cov_59.2289 . gene 296 1326 . - . ID=g10024;Name=g10024.t1 NODE_1570_length_10438_cov_59.2289 . mRNA 296 1326 . - . ID=g10024.t1;Parent=g10024;Name=g10024.t1 NODE_1570_length_10438_cov_59.2289 . five_prime_UTR 1219 1326 . - . ID=g10024.t1.utr5p1;Parent=g10024.t1 NODE_1570_length_10438_cov_59.2289 . exon 902 1326 . - . ID=g10024.t1.exon1;Parent=g10024.t1 NODE_1570_length_10438_cov_59.2289 . CDS 902 1218 . - 0 ID=cds.g10024.t1;Parent=g10024.t1 NODE_1570_length_10438_cov_59.2289 . exon 296 641 . - . ID=g10024.t1.exon2;Parent=g10024.t1 NODE_1570_length_10438_cov_59.2289 . CDS 296 641 . - 1 ID=cds.g10024.t1;Parent=g10024.t1;3_prime_partial=true #PROT g10024.t1 g10024 MWIASVIRDCARACVSPNFYREIHHSRSFTRAIIFFITLQLVFSLYSALPWLIFVKPCGILHKFVADYPDELLLVHSGDSIRIEAKGNLELPVRMRFPDITEEISGATGLHEDTLNSWHSTVFADGREVRHFISIEDDEQVRLYGPQESKSFAVVTSKGIYYKNVVSGEFEFVHASALVSVSENGTEDRWGMIASSSDGTLDKATVLKAVDQLCDLGFMRW # ORIGINAL: g10028.t1 original gene structure, not modified by PASA NODE_1570_length_10438_cov_59.2289 AUGUSTUS gene 6461 8869 . - . ID=g10028;Name=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS mRNA 6461 8869 . - . ID=g10028.t1;Parent=g10028;Name=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 8743 8869 . - . ID=g10028.t1.exon1;Parent=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 8743 8869 . - 0 ID=cds.g10028.t1;Parent=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 8416 8564 . - . ID=g10028.t1.exon2;Parent=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 8416 8564 . - 2 ID=cds.g10028.t1;Parent=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 6461 8176 . - . ID=g10028.t1.exon3;Parent=g10028.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 6461 8176 . - 0 ID=cds.g10028.t1;Parent=g10028.t1 #PROT g10028.t1 g10028 MATRPHTSSLRLDRNLLNACFEGYKLSFDNAPRVMSWTAPPPDVVACDPSHYSLNFVRLFQLNNHLCTNPHSTAPHAYYVDSEWRVIRCTLSDDKLAVRTFAVYAIPGIQRRASTRDAFNPSLHFASPDIAVVADGVGQLYILDTSTTDAWTAIASTNAPFDGMPFTVLTAGAHGGQWLMRCVLQRVIDSQSLSSNGRQDRMRSSAGSSGGTASLSGDVDSGRLGSGATTELRVYDVALGSEGMPCSVTLRATLDGKDTPRYASFEPEGDGLVVLARAPFKPVASANDAVYSVSGSDVQGEPMSVDGSVGGDDVGRGGVSESVDGADGSAQLPYEWSQAEDEVTIRLPVKNGTKKSEVAIVARPSHLTVSVGGSVVVRGALGGRLLPAETVWTLSDAVLEVTLAKADSSETGELQRWPFLVEGDGVEETHTIESIAVARDALEKYTSDLDMAPTDRPGAVASRIGREIEECDAEGSEGDVGLFRYALPPVFSDGTFSEKCRQTHAVNFGSHGFLFACNVSGEYMAGFATQYNVDALVYAVRSGVPSSSSAPDALDGEGGGDVDGGITCAHVATFSALGYVQASKREKKFLTCAPDASYAALCETARHVFVYRQQTEKKAVHASQFVVTLDDDTNNANEIVGFVALSGVAFVLSSTGLMWAIVL* # ORIGINAL: g10029.t1 original gene structure, not modified by PASA NODE_1570_length_10438_cov_59.2289 AUGUSTUS gene 9490 10026 . + . ID=g10029;Name=g10029.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS mRNA 9490 10026 . + . ID=g10029.t1;Parent=g10029;Name=g10029.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 9490 9705 . + . ID=g10029.t1.exon1;Parent=g10029.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 9490 9705 . + 0 ID=cds.g10029.t1;Parent=g10029.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 9904 10026 . + . ID=g10029.t1.exon2;Parent=g10029.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 9904 10026 . + 0 ID=cds.g10029.t1;Parent=g10029.t1 #PROT g10029.t1 g10029 MDSGGSSRVASPGMTVAPSSGAPSPVGIVTSLSLADAESIGYVQVVSLYQRLAQEYSKMKAQVGVLKKAVSEEQASVFGLRSIVQERDVKIRKMMEDIDKLEFHNQQLSKRVE # ORIGINAL: g10026.t1 original gene structure, not modified by PASA NODE_1570_length_10438_cov_59.2289 AUGUSTUS gene 2247 3125 . - . ID=g10026;Name=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS mRNA 2247 3125 . - . ID=g10026.t1;Parent=g10026;Name=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 2940 3125 . - . ID=g10026.t1.exon1;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 2940 3125 . - 0 ID=cds.g10026.t1;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 2763 2811 . - . ID=g10026.t1.exon2;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 2763 2811 . - 0 ID=cds.g10026.t1;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 2490 2641 . - . ID=g10026.t1.exon3;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 2490 2641 . - 2 ID=cds.g10026.t1;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS exon 2247 2315 . - . ID=g10026.t1.exon4;Parent=g10026.t1 NODE_1570_length_10438_cov_59.2289 AUGUSTUS CDS 2247 2315 . - 0 ID=cds.g10026.t1;Parent=g10026.t1 #PROT g10026.t1 g10026 MAFEEKSGLVVFATPWGSWGQTIEEVHVTVDVPPGTKSAHLDISIKPSFIKVGFKGKPPLIEGKISSTVVADECIWTIEDSRRVRLLLIKSFKDAKSTWRSLLEGQYEADAITFAEMEKKSMLERYQRENPGFDFSSAQVSGNYQNGGPQF* # ORIGINAL: g6067.t1 original gene structure, not modified by PASA NODE_197_length_32156_cov_41.4486 AUGUSTUS gene 28910 30142 . - . ID=g6067;Name=g6067.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS mRNA 28910 30142 . - . ID=g6067.t1;Parent=g6067;Name=g6067.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 30018 30142 . - . ID=g6067.t1.exon1;Parent=g6067.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 30018 30142 . - 0 ID=cds.g6067.t1;Parent=g6067.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 28910 29855 . - . ID=g6067.t1.exon2;Parent=g6067.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 28910 29855 . - 1 ID=cds.g6067.t1;Parent=g6067.t1 #PROT g6067.t1 g6067 MSEQRAEKPKFNGEAKEKLTVFERRWTLYEEAMRTPLTECQSDENDGRGGTPFLRCPDGRVGAVNISDTLDWVEEMSTTLAPTIAARILIRMGIPAMPAARAGVAQQLVTDVRPEDAGSSARSDAWGEQVLARGGAEYVHMLLLSMSNRMVHMAAYAYHRDFVRDLEKAYGVLRHFVLTKFGSNPFARALLEKQMETGGIPAAVAMMALAKNQGGMLESVFGNPTMRVTAKVADTAQGSGDGKDKSYEGRRRDRKNGSQSKPTTENKKGSGDEAGGKAHADGKKFVEPKTKKDLSDIRCHRCELMGHYARDCPNNPNATGIFRLRHRTRGYFGLLRVTRSTILTSLSSSRIIYRAD* # ORIGINAL: g6065.t1 original gene structure, not modified by PASA NODE_197_length_32156_cov_41.4486 AUGUSTUS gene 9331 18385 . - . ID=g6065;Name=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS mRNA 9331 18385 . - . ID=g6065.t1;Parent=g6065;Name=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 13117 18385 . - . ID=g6065.t1.exon1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 13117 18385 . - 0 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 12780 12896 . - . ID=g6065.t1.exon2;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 12780 12896 . - 2 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 12479 12560 . - . ID=g6065.t1.exon3;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 12479 12560 . - 2 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 12000 12162 . - . ID=g6065.t1.exon4;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 12000 12162 . - 1 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 11461 11503 . - . ID=g6065.t1.exon5;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 11461 11503 . - 0 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 10909 11070 . - . ID=g6065.t1.exon6;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 10909 11070 . - 2 ID=cds.g6065.t1;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 9331 10490 . - . ID=g6065.t1.exon7;Parent=g6065.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 9331 10490 . - 2 ID=cds.g6065.t1;Parent=g6065.t1 #PROT g6065.t1 g6065 MDSLVVDATSQRRSEPLKRRRRFSRAASLHCNCSSWGRSALIILIALVATHHSGLAFADVTIQWAQSSDTFIGLWLRAYDTLQANSSFNTQINLPVTTLSASQSQTPRAATTQGTGASTSALQPQGSPPQSQAQPSSRAPSGSPSGSPQPPPPPPNRRRAVSAPTSVATIIMLPNTRVPFYNASIQREKDAVAAGLNAQNALRVSVVGAGASVVMPCAGLNASTPFSVGLFGSAFVFSNLTFEGCGKIKGHWWNVQQFASASFRDIVVKRSHAWIRSASCAVTMTSVTFDDVSSDSEVGLVAQLDGGATLDANFVTVRNFAGNCDLAGSGLFGLTATSTMTASSCVFNNGNFLRKIPTSQTGGSQPAAAAINSPGGETSTGTPDAPGVDSAPASVGGILLARDRSVALFTNCNVSAIVMETASAGVFSLLDSAAVQFNGGVVTNVTAVSAGFANVANMSSLTITRVAFSAVVANGTKGDGAMHGGLAVIEQDASLKITSGSIVSSSASNLGGLVYADCRNCVVDVSGLLVTDCSAGESGGVFYINGRGAALTVSSSKFDRCASRGAFGGVAAVFGARFRSVGVTISSSSASALGGCGGAFAIVLSDSVTVDNSSFVDLSAMNAGGALVLVNSTGIVRNCNFTRVTAGAVEGTLSRGGALWMQGGRVDIVGAVFDAVTSIKDGGAVSVTSGARATIATSRFLLATSGLRGGALHVEDASLIVTSCNFTNVTAGYRTSVGQDTTVGGGLLYTAAGATVTMSGCNIGSASATDNGGAFLITTNAGVSANGCNFNRTWSNPGGNGGLAALTQSAALSLTNCVVLNSAAIAGLNSEGRPVSTSTNQIGGGVARAEYGSTFNAVGCTFGACAASGCTGGFVALFTESISSIRNCSIVSAEAGTGGGFASTGQNSQLRADNMTIGRCVGGVKVNGGFLLAGDGVYEFDSCRIGDSSADSGGLIMAKGGNSRVVLRNSVVDRCSAMSDGGLALSSENAVIVVSNSRVGESRADQGGVAFVNDISTVTLVDVIVGKTSASFGGFVGLSKLAAVVLRNVSVTRSTASTAGGVLVVNGFATVNANNITFGSCTSGFGSFVSAGDDAKLTLLNCDVGSAAATSSGGALSLSGRAAVLLTNATFGAVSAGVSGGLLSLQDDANVTLSAVSVKTSTAVQTGGLASLTARSRVVGSGIIVGSTQAGTLGGFASCIDTSACTFNYITVNTSHAGTDGGFAYVGGQASATIGDVRARLIGSGGEGGFLRANGDVSIATYRTNITSTVALLGGGLSCVGRSSVIMATASFGVISATREAGFASLKRKCKVVLTDLNVDAVDPVRGDSEEILMSDSVYGSGGAKLVGGQDTHLHLERAYFGSSSTTNGVGGFMTVYNSATANVTRVDIGSSSALYGGVLYVSRDASLSVTGMTVGSGSSGIHGGCIYVGKGATLTTADVRLSNCTAGTRFGKFGSGGVVYVELGAAWPNPGSRNVTVTNSSAKIGQGVFLVQTDGSDGQTVTIPGLLDPKDVVAYAETNAQTGSIVITSPTQLLVGGSLAGITAQPGVPMDPFVLMTADNSGLEVSVPPTQTVSVVAYAVKVDANGIAVPSQYTVKLSGDTDKSFTLSQVTFSSLSIRAEPGFYRIKFRSGNLLYTDEHPLFKGEGVPLTVTSTCPSGKTISYEDSTNGPDCVVAAVPASSSSTLVTIIPATVVPGLVIAAIAVVAVRWQLLRYRAKKSKEAHNYFVSKHLNPRKEEFADLEIDRSLIQMQETLGEGEFGIVHKARLVLGGRPRICACKALKEGATYEQRIEFLAEAEIMKGLQNPHVVSLCGIVTVDEPMLILLEYVPHGSLRQFVRDLPDHARTDGITLLLLAHFARQIADGMAYLASMNIVHRDLAARNVMVGQDAFGEYLIKVADFGMSKQTLEDVYMKRNKKGKIPIKHCAPEALLHLRYSEKSDVWSYGVCIWEMYSFGGNPYPGIANVDVLSYISAGSRMARPESCPDEVHDVMMACWDSSPDMRPSFAEISTRLIEFIEVAEAGVDGGEPMGDGDGDGNVSIDVDVRASTDGTTPAIGAYVKPFAIGGADGVDGPGVDRDCYYGPNGSRDFLESAPRNSPYDNIPGDVEERYIRRPSDFDSIGPSPMKTFAAGLSAATQSEKRRESYQDAMKMMATCADPPSKPTANTAADKRRKSKDTAIEMSNLPSNPRRPSGPGVPSVGAVGKRRQTMDTGKTSTAGGTQSEQRRPTGAALSMSPRSPLSPREHRQNSTEFKDGSAEGVAAGSYLDLTDSKTHRDEAGPSNASGADGFYLVVNQVAAPSETGGSVGSTRSLNSIAANSPYVDVYSDHDN* # ORIGINAL: g6063.t1 original gene structure, not modified by PASA NODE_197_length_32156_cov_41.4486 AUGUSTUS gene 241 370 . - . ID=g6063;Name=g6063.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS mRNA 241 370 . - . ID=g6063.t1;Parent=g6063;Name=g6063.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 241 370 . - . ID=g6063.t1.exon1;Parent=g6063.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 241 370 . - 0 ID=cds.g6063.t1;Parent=g6063.t1 #PROT g6063.t1 g6063 MGRDGWNKSASDMAKNTRNPIRRIVDQMKIAPNPEKEMIALSI # ORIGINAL: g6064.t1 original gene structure, not modified by PASA NODE_197_length_32156_cov_41.4486 AUGUSTUS gene 1029 8746 . + . ID=g6064;Name=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS mRNA 1029 8746 . + . ID=g6064.t1;Parent=g6064;Name=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 1029 1196 . + . ID=g6064.t1.exon1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 1029 1196 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 1654 1737 . + . ID=g6064.t1.exon2;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 1654 1737 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 2069 2455 . + . ID=g6064.t1.exon3;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 2069 2455 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 2729 2910 . + . ID=g6064.t1.exon4;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 2729 2910 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 3202 3286 . + . ID=g6064.t1.exon5;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 3202 3286 . + 1 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 3591 4986 . + . ID=g6064.t1.exon6;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 3591 4986 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 5240 5376 . + . ID=g6064.t1.exon7;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 5240 5376 . + 2 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 5550 5762 . + . ID=g6064.t1.exon8;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 5550 5762 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 5988 6929 . + . ID=g6064.t1.exon9;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 5988 6929 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 7319 7403 . + . ID=g6064.t1.exon10;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 7319 7403 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 7731 7807 . + . ID=g6064.t1.exon11;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 7731 7807 . + 2 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 8217 8343 . + . ID=g6064.t1.exon12;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 8217 8343 . + 0 ID=cds.g6064.t1;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 8655 8746 . + . ID=g6064.t1.exon13;Parent=g6064.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 8655 8746 . + 2 ID=cds.g6064.t1;Parent=g6064.t1 #PROT g6064.t1 g6064 MGPDLSNFGLSGEDASPAAGSLWSLLDEIPSPPTGDTASVEQLNLLLRIPLYQFQASSVHRMLDIETRRENEYRQRGGVLCEDMGSGKSAICIGLIMLTRGHVTRAPTGHRTRRDWLPARSLAVQQTTNGALPWSNSDGDGSNSGDEDLCLCGGFVIEDSPPCADCNRPYHPECADAFLSRVDVDGRRVACRAPQPMCHGCRERRRDANFRLESLAAFVLQCEGYRHVPDDMRPFVDAAVTSAVGLTLPFYVTNEHWEPPSGLRASRSRLPENMEMRVILSAATLLIVPAGLMGQWQQQFNKFCPDGSIKIHTIVRPSEVPKQEDLALVDVAIISHECISAFGIHLWPRRTFPVHSVRLSSPSQSPLDACTCAECTPCLGTCPLLGVRWQRVMVDEGAKLGHIGAPTNLKSFVGKLPADALWVISGTPLVGRNVETDLHRIRSLLSFVGREPFAVVRGRSWTSRWTKEIVAPIVAVQRLKKKRALAIASKRESQASRDIASESIGMSSVNVTASEKHVRTNDASRDHAPPHAKSGGWTGESFRSALPDCGGALDAMDGDLHPRTTTTTTTTTVSVAAGLESDADGSMEGSMCALMDISMAGEPDEATDSTVVHDTDTTSHLPIVSLDSCDSNATVFDAVGVCRHGESVLSGSPPPGSGVDLLHPAVYGHAHVTAADSQIGSTNVDSVSGNGKSGESGESGESEDIIVVDDEDAMGAGDDLKEMDVEDAHPGYRAACRRLKTILADSFVRHSVKEVYDEAQLPPLTIAVIRLPMAPHERQLYNEVAAQVITNTITSQKEGKDYILHQDNLKHALNAVFNLQQACFFHEALSPQERDLGCEAIEKYISDHATNPAEQENIRTLATPMHIFRSHPIVRFDALDCYSMLGAPSVVDTPEIDAFLRRDVSAYGMGMVLWGDGRLLVSSWLWPLIAHRVFAENAKPDALTVRNALTVATGYLDNCTPQSGDSKPDDSEVPCTDVATSFASRPEAGASSTDSALSYPQNNTEENEHPGELSVGAPVARPKRQRADDDTADGGNEDSGVSTKRKRVRFEVPDGAHQGDTMPDSTMPDSSHPSNNEAPERNGSPKKGKGKAIAAEIGKGKAAVAEKGKGKGAADGDTYAAILFKNACVHWSYRLSSHAEFSSLVTSSTKLNYVLSRIRAVIGDEKSIVFSQRHETLQYVMDALNLLGIKHVQYVTYMKPSQRSSALTTFATSDDCRVIVMDSIRAAVGLDVKAASRIFYLDPLWDIAKEKQAFKRSHRIGQTRHVHVEKIVMADTIEEVIAGTSDAGKAFAEIGNTARVEDIVTDKAIEQRRLHAIVSAIRFI* # ORIGINAL: g6066.t1 original gene structure, not modified by PASA NODE_197_length_32156_cov_41.4486 AUGUSTUS gene 20605 28516 . + . ID=g6066;Name=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS mRNA 20605 28516 . + . ID=g6066.t1;Parent=g6066;Name=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 20605 20734 . + . ID=g6066.t1.exon1;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 20605 20734 . + 0 ID=cds.g6066.t1;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 20990 22587 . + . ID=g6066.t1.exon2;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 20990 22587 . + 2 ID=cds.g6066.t1;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 22836 25454 . + . ID=g6066.t1.exon3;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 22836 25454 . + 0 ID=cds.g6066.t1;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS exon 25751 28516 . + . ID=g6066.t1.exon4;Parent=g6066.t1 NODE_197_length_32156_cov_41.4486 AUGUSTUS CDS 25751 28516 . + 0 ID=cds.g6066.t1;Parent=g6066.t1 #PROT g6066.t1 g6066 MDRMRRTSQAERPTMPVEGRSEGSKARLYMQHMKAMRPFFKGTGSTSSMDSGGRSTPHNQLSRRGEPLWPDVTLPHTTTFLHRGGNPQSSAHRNFAWKSVSVFVSSTFLDMHAERDLIAGLAFRRAERRLQEDGYKVHIRGIDLRWGITGKESEAGLATEICLELVSRCRPFFIGLLGKRYGFQPVSTEGRPYGVTLTNPMFEFVGDFPPNRSITELEMFFATAPYVSSDGTGIKHPHALIYERDDAFMKTDKFALESEQQRRLFEQAPERVEAIRRNLFARGFKIRRYAARWVPENSKNKVKGGLNTTEEFVTDSSGGHLVLDIPASECPPGTAPLADMIANDLVLAIKAEYPMPEGGEPDEFARTRMAHAAFAEDLSASFVGREDTLERMRHFVATGCTSARHRKEDDSGWNFSASRTSSTPECASRSCDEGKNKRILVVSARPGAGKTALIARFAESLLTAHHSGSGTQMGIICHFVGPINGSSNVRTTLVRLCKEAHELSVRRGAGSVHGAKEALNSEDFMTLLKNGTLGRCLSDAAASAASGEGDHNDPISEKSEGKYFARVVVIIDALNQFETGDDAHALHWLPESIPEGVVFVVSTLEGPCLDALRARPDSTILGISPLSSEERRAIVRAALGAYGKRLDEGLPARTPSPPPPPPSPPRARSVPARRSHSPDRGVSAESMGSMVSLTSAIARGASLSPTSFRKAKSADAQLDSIPRMPDSLSTVHGLRGRTVVEYGQQLTRRARDRLRREKERAMLMVKAYGGHVLGDRHGSARPPHRKPWTVVGAAVANALQRDDKPALSMSQMDLLLSKEDAGLPLYLSIACEELRLFGNYEKLTHKIKLLKPTLGALLGQVLSRLEVMHGAALVRDALSLLACSRRGLRIEDMRRLLAKHAALPNSQPRRGGAGGSGGGVGGSAGANRSASPGPLGSSLEHSFRGREAIISDDEDDEDHVRDRAGHRDEPADEEGAGVGTLPMPQWLPLELSLSPFLKTSVTEDGHELLTFFHRQLLLATRQRYLITCPEQCDAYMRGDGCVHVTNPSPTSADARYHTQLADYFCGLKELCVSSAEHSAASSNSSEEEESGWRYVPVWAMAEAFHHSLVCGLWSQAAALLIDIEYVDARCAGGDVSGLAEDYWRARCTYALAYKASMPASDGTPAQQRREIGARSSTSSNAAETRGKVRFADANKPKSTGEEQRDRSARAPAADPSHDNRFDSFASLVSLLDINSRDRPADVRSMRKLIEYHQFFRSNAHLFSVPSPHGRVVNVALNMLAQNCEPARSARRAVATGRTSDIALWRHVTGPRDDADHPCTAVLSGHKAQVTCVALSDDATSVASGTRDGTVRLFDVRTGRTRAVMSGHEGSAQTVTFSSDGQFLASGSWDSTVRYWHAQTGRCLSVMRGHADIVWSVQFVPDGKRIVSAGADMHIRLWVAATGRCYAVLEGHEHSVVSISILPHSKHAISCSVDNTLRMWDVSPPASSGWHFGPSLTSRKRAKKRSSFSAAMNDAFQTSETSGTPTAGPTVEVRKALSVFSGHEGTVNRCVSFSHGRKVLSCSSDGTLRVWHLTTTGKTPLVMTGHEGDINWCDVSPDESLFVSAADDGTVRMWMAENGACLAVIDEHGSSRVRFACFVAGGLAVMSFASDGMTHVYTTPARKKRVDSASLHTSFAVTTKVPIPSASTSSHQSIHRRTVTNAIQGSHPSQSTTQTPSINLADSYGFRSVADFSASTTSGTSNASNTSGSASALKAPLRSALKGGEALAVVADAQSNASVRPASPTRPGHPMCVFSGHVGVSACASRGDCVASIGSDDAVRIWEPSHVMAQAKKTGGMPSPSSSRRGSVDASGHRGSSADGTGLGVKKVLLAPSSLAPNGRTVVGKMSGDARLRLSNTSLASIHTRSEPSLDKEESRMVLLEDGMGVHVTLDLPAAIASAPALSAATGALGSSGDIMGHVHASSRPVSPKSTANARVVSAFFSRDSAHVLVCADSTMALSSQERVGGVPSPTHRVTLCVCNVADGSVTAIAHFDCETNDGEGAAVRLPVRLDSIVLSPSGTEVYAVRDDTLVVMSLHDPSGQQEVFSGAEDDMERVQSAHALDHPSYVAEWESVGLQRAVRLRGDPRSISANGSAIICTDVGSSNGHNAVVVSLSGGSADAHAVPLCGHAAPILTCAFVVDGGTNVVARANEPVFTAASDGTARMWNSESGACLYEFSGLGGVALCVDFRWGDGAPTALLCYSPDDGCLHVWSWPSLPTTSTTGDSTVISVSTVAAASGQNGQKHAHPPARTWSWRLDGAAAAAMSNWQHTGGSGVIVAYALSSQEVARVNNVNAKEKLLRGSHATTWRAFSVAVQHVQGITVVRAEVPSLD* # PASA_UPDATE: g10818.t1, single gene model update, valid-1, status:[pasa:asmbl_9389,status:12], valid-1 NODE_790_length_17639_cov_41.3415 . gene 109 1285 . + . ID=g10818;Name=g10818.t1 NODE_790_length_17639_cov_41.3415 . mRNA 109 1285 . + . ID=g10818.t1;Parent=g10818;Name=g10818.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 109 151 . + . ID=g10818.t1.utr5p1;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . exon 109 227 . + . ID=g10818.t1.exon1;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . CDS 152 227 . + 0 ID=cds.g10818.t1;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . exon 644 729 . + . ID=g10818.t1.exon2;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . CDS 644 729 . + 2 ID=cds.g10818.t1;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . exon 911 1285 . + . ID=g10818.t1.exon3;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . CDS 911 1057 . + 0 ID=cds.g10818.t1;Parent=g10818.t1 NODE_790_length_17639_cov_41.3415 . three_prime_UTR 1058 1285 . + . ID=g10818.t1.utr3p1;Parent=g10818.t1 #PROT g10818.t1 g10818 MDAGIPMRDYVCACTAGRIDMTPVLDLNYIEDSANGPEVTAAVMPKSGRIVALEMDGRTHADTIEEVLDLATNGCHALYAAMDAEVRQRTRTLADAIGPIDE* # PASA_UPDATE: g10821.t1, single gene model update, valid-1, status:[pasa:asmbl_9392,status:12], valid-1 NODE_790_length_17639_cov_41.3415 . gene 15170 17549 . - . ID=g10821;Name=g10821.t1 NODE_790_length_17639_cov_41.3415 . mRNA 15170 17549 . - . ID=g10821.t1;Parent=g10821;Name=g10821.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 17437 17549 . - . ID=g10821.t1.utr5p1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 17133 17200 . - . ID=g10821.t1.utr5p2;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 17437 17549 . - . ID=g10821.t1.exon1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 17122 17200 . - . ID=g10821.t1.exon2;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . CDS 17122 17132 . - 0 ID=cds.g10821.t1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 16587 16736 . - . ID=g10821.t1.exon3;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . CDS 16587 16736 . - 1 ID=cds.g10821.t1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 16179 16265 . - . ID=g10821.t1.exon4;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . CDS 16179 16265 . - 1 ID=cds.g10821.t1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 15541 15906 . - . ID=g10821.t1.exon5;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . CDS 15541 15906 . - 1 ID=cds.g10821.t1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . exon 15170 15370 . - . ID=g10821.t1.exon6;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . CDS 15313 15370 . - 1 ID=cds.g10821.t1;Parent=g10821.t1 NODE_790_length_17639_cov_41.3415 . three_prime_UTR 15170 15312 . - . ID=g10821.t1.utr3p1;Parent=g10821.t1 #PROT g10821.t1 g10821 MVSLDGSLSFKLDLTQRSVAGGRLPSYLQRMPLDTQPHYRSLLARQEDLNAELKAAHEHTQLVKGLLLRLAELDKDADDQKKRQSRLKNQIKDVKAEIDTLEAALLEEDDEEEVGAQEGPSGNSPSPKRRRVEANPEPSPASHLRPRAQHQQHSPLTTPPVDAPQSGGNASTRAGGDSLSTPPALGSARRTRSAVVDDKSDDSDESLEGDSQRHSKRLKMGSQ* # PASA_UPDATE: g10819.t1, single gene model update, valid-1, status:[pasa:asmbl_9391,status:3], valid-1 NODE_790_length_17639_cov_41.3415 . gene 1432 3554 . - . ID=g10819;Name=g10819.t1 NODE_790_length_17639_cov_41.3415 . mRNA 1432 3554 . - . ID=g10819.t1;Parent=g10819;Name=g10819.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 3333 3554 . - . ID=g10819.t1.utr5p1;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 2857 3090 . - . ID=g10819.t1.utr5p2;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 2413 2529 . - . ID=g10819.t1.utr5p3;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . exon 3333 3554 . - . ID=g10819.t1.exon1;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . exon 2857 3090 . - . ID=g10819.t1.exon2;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . exon 2298 2529 . - . ID=g10819.t1.exon3;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . CDS 2298 2412 . - 0 ID=cds.g10819.t1;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . exon 1432 2058 . - . ID=g10819.t1.exon4;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . CDS 1496 2058 . - 2 ID=cds.g10819.t1;Parent=g10819.t1 NODE_790_length_17639_cov_41.3415 . three_prime_UTR 1432 1495 . - . ID=g10819.t1.utr3p1;Parent=g10819.t1 #PROT g10819.t1 g10819 MPSLTGTLVLVLALLTLVRVSLCADTGACSIPDHDVNGEPTHQSTATASEDGVPSAEQDRVVSRDREDAHAILVAAFHTKPDLTECSRNDLDDKQEASRKAACIAACEANFTSSMQKAGLWAVGGGAAAGLAAFAIGPALAAIGFTTGGVAGGSIAAYVQSHFYGGYAAGIFSYVQGLGAVGGVTTLAKALYIAFGTFSGLASESMSFATFVVGERCEQECRCIA* # PASA_UPDATE: g10820.t1, single gene model update, valid-1, status:[pasa:asmbl_9390,status:3], valid-1 NODE_790_length_17639_cov_41.3415 . gene 4124 9108 . + . ID=g10820;Name=g10820.t1 NODE_790_length_17639_cov_41.3415 . mRNA 4124 9108 . + . ID=g10820.t1;Parent=g10820;Name=g10820.t1 NODE_790_length_17639_cov_41.3415 . five_prime_UTR 4124 4332 . + . ID=g10820.t1.utr5p1;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . exon 4124 6939 . + . ID=g10820.t1.exon1;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . CDS 4333 6939 . + 0 ID=cds.g10820.t1;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . exon 7222 8425 . + . ID=g10820.t1.exon2;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . CDS 7222 8425 . + 0 ID=cds.g10820.t1;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . exon 8606 9108 . + . ID=g10820.t1.exon3;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . CDS 8606 8934 . + 2 ID=cds.g10820.t1;Parent=g10820.t1 NODE_790_length_17639_cov_41.3415 . three_prime_UTR 8935 9108 . + . ID=g10820.t1.utr3p1;Parent=g10820.t1 #PROT g10820.t1 g10820 MASILAVLSRRIFRTTQGRFARARPDVIVLALFVIATTFIPIASAVTPAGPQCVTATEDKTNRGTVPAQSTTTPVKTHSFGDASKLKIVPDWCFDENSCLTYSPLQYNETSATDVTKAADDANIGKPGYFSTTIASGDNIPSRGGVVWIVQLDTLPTLYSHAGSAQKPYTLSFWHRQHKSNSVENNSTRFPSLTIRASIASSVGVDLATLNGKPFYGNFQSAQLISAPGGDAQQSLVFTSKTDKWTLQSAAFYLKDTCIGCRLLLHVSYDSWPSWWGNQLYFGNLTLTEPPVTLADVPSHHVTEHEVATIPVMPHLSTSIPPRTNCPHLSPDVKLWHDAVTWGGPEALPAAGGSVTLPANTIVLIRSCSISAGIVFKDIVIPATSALVFDDGDITLEAHNIVVYGKLQAGSPTCRLYSRIDIVLHGNKEEVLATHDVKTSKGIVALGGTIDLHGKEYYTWARLAKTTYPGDMQITLQEPVNWEAGQQIVVVTTIFRDYETDQNEVVTVAGVDAAGTTVALTQALAFVHYAGREYQAEVGLLSRRIRVLGNEADSVATSFGGHVMVAQHGIGRFSGVAAVRMGQKNVLARYPFHFHVLGASPDSFVRDCAVVQSFFRCVVVHGTDNATVARNVAFDVQGHCYYLEDGVEENNVFEFNLGAFIHTIFRAAAGWGQTGEVFVESDELRNPADTAAGAFYITNAMNRFVGNAASGGWTGYAFPNLPRPIGAHKDLDFSETLRNPLNRNILAFDGNTAHSASGQWWQAGCVYVGGSLYTRSSDGLLEYFTGRNSRQTFDDSGRQVFMKFTNTAVALCTIGINHWGDNVEVHSFEAHDIKRSAVLFGQAYLHRALSNGRTPNSEIVDLHIGAREGFQYYDTWVATMLNNVTFRNYNYDLGDVVILGMTHSDTYKPQGINAAKNIRYENCGRKGILAIADVPTGSSWMYNIIDYDGSMSMRGRPTIIGSHQSWFNYDSTCVKDADWDLWLCDKGSRDIASMEIIMPGITRTNAEEGLFESHRHIGYMSLGSSPDSTRLILTKNPTTTGISNAVWVMRLFGGSPTTVRIDTIQIPKNNFVVLAIPYPSTAVINVTILQKYYVWPDPVVYPVRRVNSLEELMRPEELSEADSRPCGETWDFLLCAPASAPGPAWMFDGKMLYVRMVDIALYANTYKGFPDGKFERDGMMLNTIESGFQWSIDATCTDTCASHSPTTCFIPDSAKLPNTTVDIPTAQYVCARTGVDPASPSITAHPATKYVVLCFQTACHITNNRLDGVRELFTLGANDEFVGVGKDPSAVVLYVRNKSTGLVTESRDYGATFAVTDASNARIDNLLPTTTVDVDADPNAASLLSVAGEVWRVTSRGVSLASSNRERMRWSCSKACPNS* # PASA_UPDATE: g8303.t1, single gene model update, valid-1, status:[pasa:asmbl_1264,status:12], valid-1 NODE_1341_length_11901_cov_39.0923 . gene 6876 7855 . - . ID=g8303;Name=g8303.t1 NODE_1341_length_11901_cov_39.0923 . mRNA 6876 7855 . - . ID=g8303.t1;Parent=g8303;Name=g8303.t1 NODE_1341_length_11901_cov_39.0923 . five_prime_UTR 7848 7855 . - . ID=g8303.t1.utr5p1;Parent=g8303.t1 NODE_1341_length_11901_cov_39.0923 . exon 6876 7855 . - . ID=g8303.t1.exon1;Parent=g8303.t1 NODE_1341_length_11901_cov_39.0923 . CDS 6894 7847 . - 0 ID=cds.g8303.t1;Parent=g8303.t1 NODE_1341_length_11901_cov_39.0923 . three_prime_UTR 6876 6893 . - . ID=g8303.t1.utr3p1;Parent=g8303.t1 #PROT g8303.t1 g8303 MLLPEGDLRGLLCLYWVGGAGVVVILDVCVALLSDSPFLRDCLAWGKLKDGSRPSSRGKNDRIFLYLSLILNVPKRWFAQFYFFGTVWNAFLVMSCTGVIDGKWLDSIIGDDLPQPSGGIQRRMRAVEPAFMLALVMMLAQTTRRLYESIFVSVFSSRARMHVLHYIVGVTFYICNSLSIVVDSHAQSESAFSYREYGALRLTTTAAGVCLFIYASVHQHKSARILASLRSGPSSDGYFIPRGDWFEFVTSPHYFAEILIYIGIGLALDALTHRMWLLVVLFVVVNQVTAAHLSHLWYKRTFANYPSTRRVLIPGMY* # ORIGINAL: g8304.t1 original gene structure, not modified by PASA NODE_1341_length_11901_cov_39.0923 AUGUSTUS gene 8184 9710 . + . ID=g8304;Name=g8304.t1 NODE_1341_length_11901_cov_39.0923 AUGUSTUS mRNA 8184 9710 . + . ID=g8304.t1;Parent=g8304;Name=g8304.t1 NODE_1341_length_11901_cov_39.0923 AUGUSTUS exon 8184 9710 . + . ID=g8304.t1.exon1;Parent=g8304.t1 NODE_1341_length_11901_cov_39.0923 AUGUSTUS CDS 8184 9710 . + 0 ID=cds.g8304.t1;Parent=g8304.t1 #PROT g8304.t1 g8304 MLGEHYATTGGMVATRERGAVISATEDETELDELFARVEIQLMDIMAAVKCAPLTPLSSDQSISRGDDRDAITKSDNSEGGGKTTTALTQPSSDMCSEDLRSVTLSPSLTIDRNGSLDSSTFGSESPLSMSWRSDTERTNDSEDSIGRALPVHYNINIAHSSNNNPDCNTKNDINNNNNNNSNNNNNNKNISDDASTLPTKDSRPLSSNFLSRFPDRWASEVRNAFSSKPATTTNKYEVDICADGAAMPVTRQDSGCSVASSASSSYLSSLSSSNTSPRLFGRSMSAMGLDSAHSDGKLFRHSDKGTAGTNSPGGVVSLPSSPSSRPKWLGGGRNKADEQARLKKLKEEENKRRDSLDECYRGAALSCLRKALTIAAASSESASSGSAADVNAGEECPDRVPFPALDDDLSAKSTSTIISAEEALAACTHLIATAVTLLDGGKDRTLTREQMEIPQRTPPQRIDSSVVVARDGDGVEGRPNTPNSARVQRERIGFAARFARTVRDLKI* # PASA_UPDATE: g8305.t1, single gene model update, valid-1, status:[pasa:asmbl_1265,status:12],[pasa:asmbl_1267,status:12], valid-1 NODE_1341_length_11901_cov_39.0923 . gene 9903 11644 . - . ID=g8305;Name=g8305.t1 NODE_1341_length_11901_cov_39.0923 . mRNA 9903 11644 . - . ID=g8305.t1;Parent=g8305;Name=g8305.t1 NODE_1341_length_11901_cov_39.0923 . five_prime_UTR 11617 11644 . - . ID=g8305.t1.utr5p1;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . exon 11359 11644 . - . ID=g8305.t1.exon1;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . CDS 11359 11616 . - 0 ID=cds.g8305.t1;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . exon 11034 11162 . - . ID=g8305.t1.exon2;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . CDS 11034 11162 . - 0 ID=cds.g8305.t1;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . exon 9903 10717 . - . ID=g8305.t1.exon3;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . CDS 10625 10717 . - 0 ID=cds.g8305.t1;Parent=g8305.t1 NODE_1341_length_11901_cov_39.0923 . three_prime_UTR 9903 10624 . - . ID=g8305.t1.utr3p1;Parent=g8305.t1 #PROT g8305.t1 g8305 MLSNLRATDWCDRIAKAYLKLQGKRDPEVLHRLFLQYTWQWPFYGATFFYGELPPNTALILRDRMNTIVRVAVSAEGVTVINEGSNKILHSFVYDDIAWDLTETEDAGMLVIEYGPEASPQELQILSLQARLMDTIIERCVDILNSKDAEIAHIREQQK* # PASA_UPDATE: g8301.t1, single gene model update, valid-1, status:[pasa:asmbl_1268,status:12], valid-1 NODE_1341_length_11901_cov_39.0923 . gene 175 1988 . + . ID=g8301;Name=g8301.t1 NODE_1341_length_11901_cov_39.0923 . mRNA 175 1988 . + . ID=g8301.t1;Parent=g8301;Name=g8301.t1 NODE_1341_length_11901_cov_39.0923 . exon 175 357 . + . ID=g8301.t1.exon1;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . CDS 175 357 . + 0 ID=cds.g8301.t1;Parent=g8301.t1;5_prime_partial=true NODE_1341_length_11901_cov_39.0923 . exon 545 670 . + . ID=g8301.t1.exon2;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . CDS 545 670 . + 0 ID=cds.g8301.t1;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . exon 879 1053 . + . ID=g8301.t1.exon3;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . CDS 879 1053 . + 0 ID=cds.g8301.t1;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . exon 1354 1988 . + . ID=g8301.t1.exon4;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . CDS 1354 1865 . + 2 ID=cds.g8301.t1;Parent=g8301.t1 NODE_1341_length_11901_cov_39.0923 . three_prime_UTR 1866 1988 . + . ID=g8301.t1.utr3p1;Parent=g8301.t1 #PROT g8301.t1 g8301 SMGHRVILVSSGAVGVGCQRMNLAKKPDSLVERQALAAIGQGRLMRVYDELFSYFSQPIAQVLITRGDLAERAHYLNARNTIMMLLDKNVVPIMNENDTIAVEELRFGDNDTLSALAAAMVDADWLFLLTDVDALYEDNPNTNPNAKAIRIVENIDDLEKQARIVGAGSQWGTGGMETKIVAARLATASGCRTGICKARSPGDMLTMLAGGRDVGTVFLPKPNPIRGTKRWISHGLQPMGELRLDAGAVDAVSRKSSLFAAGIVAVHGDFPAQSALRLCDIDGREIGRGLTNYSRAELDVIKGKKSREIGEALGYIGNDCVVHRDNIALLT* # PASA_UPDATE: g8302.t1, single gene model update, valid-1, status:[pasa:asmbl_1266,status:3], valid-1 NODE_1341_length_11901_cov_39.0923 . gene 2195 6148 . - . ID=g8302;Name=g8302.t1 NODE_1341_length_11901_cov_39.0923 . mRNA 2195 6148 . - . ID=g8302.t1;Parent=g8302;Name=g8302.t1 NODE_1341_length_11901_cov_39.0923 . five_prime_UTR 5959 6148 . - . ID=g8302.t1.utr5p1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . exon 4840 6148 . - . ID=g8302.t1.exon1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . CDS 4840 5958 . - 0 ID=cds.g8302.t1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . exon 3032 4657 . - . ID=g8302.t1.exon2;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . CDS 3032 4657 . - 0 ID=cds.g8302.t1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . exon 2638 2778 . - . ID=g8302.t1.exon3;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . CDS 2638 2778 . - 0 ID=cds.g8302.t1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . exon 2195 2326 . - . ID=g8302.t1.exon4;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . CDS 2285 2326 . - 0 ID=cds.g8302.t1;Parent=g8302.t1 NODE_1341_length_11901_cov_39.0923 . three_prime_UTR 2195 2284 . - . ID=g8302.t1.utr3p1;Parent=g8302.t1 #PROT g8302.t1 g8302 MSGRASGRSDLHGSSPQIHLIGDHASSPTLKRSSTDAKLRNSPDNTGRPQSGLGLPRSGSTVIAGQPSQKPRTLRESALAGGGSKEFSRKGTNGSLQNVSTYLPKQPSPLSSASTNDALDQRRSLPLHLADDNDEVSQKLAATADVRSLVEEDAKYMDRELSKIIADLESPKGSLSDLKIIDDDDFPPFDMSFTRTAPVDSSSAARRTSVGASGANIGGAERIVAGPNGAAPIKYPSSVEKSFGAKPTLNTQKMRKGAWVSVKDFEVVRRSAEELLEQNDYLNGEVMRLKEQIQSRETSERDSVTIAATLTKENQEIVEKMRGMEGDLALARERIKTQKDTYEMMARKLKAEAAELRASNNELEALVVALREEVYRRSAKRNKSGMNQSNEVEDLRRTNAELDGKVAWLRQRLDGYEQESALREQATAAAANAGVSPVNAARLTKHKRRWSVSKKSAEDGMVDEEKASNAGDTPTENASDVGAHPDDPAVRTSLRPPSPIAEEVPRSPRSPRSPRGPQPVSPFQSQTQTHQHAHGTSPSSQPSPGVTSANNPLSPKGQNAFVGASQQQQQQQSSVQRRRSSNGPNLRVGTSDEVAAPTVASHQQVAMLSLRDLMYGTAGTNLDDALLAMHRGIQAQIDGLENSLGLILYRLSTSYERAIDEWEGVAEIALMMGSTSVEKIEVQVMKRENGNLLGQLRSLFREMRTRVEDLSMANIRLEQVLKATMNSRSHAAAAAATSQASSGGGGSALTIQPTLSVASNYSVGGAGADIPLFDFTGGALSSSHGVGAGGSEGSGGRRSFGENRAFEAGFNSASAMAASGASSGSSVGAGSAGMGQQQQQQQQQQQLQQQQLQQQQHADQPALAQWRWLDCSYGEILRLANKRNSLIANMRHFEKTMADPRRLSRERLAKGSMHLIDEERFRRTAVPELLKIERKLRVMILQFEHLTGQPFYKDGEDYLKAMEADIRSRSFEMWM* # ORIGINAL: g2761.t1 original gene structure, not modified by PASA NODE_5531_length_815_cov_29.3703_potentialcontaminant AUGUSTUS gene 292 815 . + . ID=g2761;Name=g2761.t1 NODE_5531_length_815_cov_29.3703_potentialcontaminant AUGUSTUS mRNA 292 815 . + . ID=g2761.t1;Parent=g2761;Name=g2761.t1 NODE_5531_length_815_cov_29.3703_potentialcontaminant AUGUSTUS exon 292 815 . + . ID=g2761.t1.exon1;Parent=g2761.t1 NODE_5531_length_815_cov_29.3703_potentialcontaminant AUGUSTUS CDS 292 815 . + 2 ID=cds.g2761.t1;Parent=g2761.t1 #PROT g2761.t1 g2761 RELPRSQDPRRRCXXXXPMRTSATAAPLAATPSSRPPRATSSSPTPFSATSPASTRLTPSTARPPTRTPWSMPGWTWSHPRPIPSPPTSLPSFAARLPTPLTSLRSLSPSSSPSTTGSRPAPSSLVSARPSPISTWPSPSRYSIALPPTPRPSPRSSRTCGACTTLLCSSPRPS # ORIGINAL: g8198.t1 original gene structure, not modified by PASA NODE_854_length_16723_cov_38.9716 AUGUSTUS gene 13593 16372 . + . ID=g8198;Name=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS mRNA 13593 16372 . + . ID=g8198.t1;Parent=g8198;Name=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 13593 14602 . + . ID=g8198.t1.exon1;Parent=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 13593 14602 . + 0 ID=cds.g8198.t1;Parent=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 14840 14962 . + . ID=g8198.t1.exon2;Parent=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 14840 14962 . + 1 ID=cds.g8198.t1;Parent=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 15097 16372 . + . ID=g8198.t1.exon3;Parent=g8198.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 15097 16372 . + 1 ID=cds.g8198.t1;Parent=g8198.t1 #PROT g8198.t1 g8198 MPLSLYSSLHVALVVVLALYVFDGAHGDILFGQSCALSGPTKDLGTEMRAGLLAAFREVNLNGGIRGQNLSLVSLDDQYEPVFAENNTRTLLNNYGVFGIIGLVGTPTAAVSLPLALAASTPFIGAFTGTGALRDPHNSMIVNIRASYNDETAAMVQYLVNVKLINRISLFVQDDSFGTAGYNGAKRALTAMGMRIESEGKYPRNTLDVEAGLGDVLTKGRPQAIIMVGTYSPLAKFVKLAKADSRLDNAENVIFMTVSFVGSNSLRAALGNTTDNVLITEVVPLPFVTANNNLPVITNYVNALAASDPTSAPSHVSLEGYIVGRFVASVLERIPIRDSLSKVNFINTITQSSVFLIDGLSLGPYRDLDATCPYRICKCNQGMKEIWTVRMDSNTKEFLLVDEAKFNFYDTCFSDVTALKYPIVFGGSLPLEFGQPMTAPAYLRQWSTIRAALNASATSSAVVAATRAQLQGLADAFISVNKNNGVNGHRLHIKVLDDAGSPGALEKNVQTLMLDEKVYGFAFPYGPMATQKLTTVVDSVLANAANANRLATGSYVPTQMPIMGPLTADLAMRSDFALEQIYVLPSHKDEARAAIDYAVRSMGYTRIAILYFDTNLAALLSGSSTSSTSSSSYLTTSFFNGNKAYAAAVDALGHYGLKAERIASITSASGISDALDRLSFRSSRPQAVFVAAEGSVLASVVSALRLAHATTDSLVLVGSYARTSLLGSDFASVDSSRVILADGQMLSTNTSIKAVSGWDVYTSQAYANGKITGMFIASILARIVVGDPSQKNFLASAYSRWV* # ORIGINAL: g8196.t1 original gene structure, not modified by PASA NODE_854_length_16723_cov_38.9716 AUGUSTUS gene 5923 7920 . + . ID=g8196;Name=g8196.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS mRNA 5923 7920 . + . ID=g8196.t1;Parent=g8196;Name=g8196.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 5923 7920 . + . ID=g8196.t1.exon1;Parent=g8196.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 5923 7920 . + 0 ID=cds.g8196.t1;Parent=g8196.t1 #PROT g8196.t1 g8196 MAHCSAYRREENDALDAVVLIDYDNCPYAAAQVASLGLDDGSGVAVYIFTNRPIFVKDLEKSFPAAKVIPVRRLKQEADVVMAVVAGQLDATLRLDTALFLVSTDAIFESISWTIGTHLPHISALRRKNRDVSDEKKARICVRIDPVREHAGLSVASYLSDGSVRPRTIALKELLNWLRKSDPIASALALVRNSPHMAEIDAEDTITRSVERCLAADSSLRDSLSKYALNGAFVVALELLRLDRQGALPVHAVHEQRRGHVTGLPSDAFPRPSNTSAAASTGIGKSVPPVSVDRAQKAYSLEYLQRKISALRSLLAKKAVTNANASLSDAKQRAFHSTAAKIEELIAQGYQDVQIRENAFAFTPFRAAFKDIVFAAMDFCDTSPSPRCTVPGALIELKRLDLTRVDPNWKSYVDRLNSVHAQIRSAQGGVTIGTLAATKTRYTGTMTALLLIDLLVRLTHWPHPIDEPLGDALTDSMDASSETPTHTRATTSPPADIPTRAPTSTAASLVGYALALLERTDDLRTQLERFQSTFLAPTAVFVVAGMDDVEGRPHNFAFESFRAALKQLLLSALARRDRPALFKSSVPQLLLALDRDCTAEASGATTDRGDWAAFVGHCQTIYESIKTGHGGNPGVLTRDRNRYTGMAAVRLLVDGMLQLERLSAN* # PASA_UPDATE: g8197.t1, single gene model update, valid-1, status:[pasa:asmbl_9692,status:3], valid-1 NODE_854_length_16723_cov_38.9716 . gene 8289 12460 . - . ID=g8197;Name=g8197.t1 NODE_854_length_16723_cov_38.9716 . mRNA 8289 12460 . - . ID=g8197.t1;Parent=g8197;Name=g8197.t1 NODE_854_length_16723_cov_38.9716 . five_prime_UTR 12387 12460 . - . ID=g8197.t1.utr5p1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 12199 12460 . - . ID=g8197.t1.exon1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 12199 12386 . - 0 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 11216 11971 . - . ID=g8197.t1.exon2;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 11216 11971 . - 1 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 10589 11002 . - . ID=g8197.t1.exon3;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 10589 11002 . - 1 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 10258 10349 . - . ID=g8197.t1.exon4;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 10258 10349 . - 1 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 9924 10066 . - . ID=g8197.t1.exon5;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 9924 10066 . - 2 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 9354 9549 . - . ID=g8197.t1.exon6;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 9354 9549 . - 0 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 8948 9169 . - . ID=g8197.t1.exon7;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 8948 9169 . - 2 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . exon 8289 8634 . - . ID=g8197.t1.exon8;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . CDS 8492 8634 . - 2 ID=cds.g8197.t1;Parent=g8197.t1 NODE_854_length_16723_cov_38.9716 . three_prime_UTR 8289 8491 . - . ID=g8197.t1.utr3p1;Parent=g8197.t1 #PROT g8197.t1 g8197 MSFVGAKKQIRTFGKFPRMVSGVTNSIWNTSIVGTASASTSQAKATIDVCAEAEDKENAVVQSDSQLPVSTTTTKPALEADADVAEHNESGHEISVSTNNRRSLLDHSSISTTKEIPIGFSPVRRSAEKGRRRSSFGPSASSPLATAPSPSKHSNDDSVCSSNDSFVTTVDPDDRAGLHDVLVGNSFHRPPASPSRPPSRGACETDEQLQNFATLQEVEDESVEASLQCAVARLFLSSSKEHTQLSAEAGKAVAGDSGAVRECAALPSCENVGVHDDVVRSEGDKGAEYESPLSAVLAECGLEEVIPIGAFLDERVLSSCVKIGEGSYAEVFRCTTWTPRTQSNQASSGNYTNTNNEDSDKTTNPCVVFKVVPFGSDTLYNGSEQPTADAVIPEIANSRLLSDRRELLASGEGQASAASKPSSSRGARARKGAKKVVAPPKNSAASSFIRLMDVVVCEGAFPLKLMDEWDAWDSRKGSENDRPDIFDSNQHFVIFVFADGGVDLESVALGSFQEAKAVLLQVAFTLAAAEEDLSFEHRDLHWGNVLVKPCPASSVASPDDTALCYTIDGRRYSLGNVDVADVRASIIDFTLSRLLSPDQRLIYYDFSQDESIFEGEGDYQFEIYRMMRDAIGNAGWASFCPITNVFWTHYLIDKLLSKRISSNAGLFSAAMGNMPAASSRSERREMAKLKDRILAYKSAVQMVSEDPYFSRYCLATK* # ORIGINAL: g8195.t1 original gene structure, not modified by PASA NODE_854_length_16723_cov_38.9716 AUGUSTUS gene 9 5273 . - . ID=g8195;Name=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS mRNA 9 5273 . - . ID=g8195.t1;Parent=g8195;Name=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 5175 5273 . - . ID=g8195.t1.exon1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 5175 5273 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 4884 5021 . - . ID=g8195.t1.exon2;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 4884 5021 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 4558 4639 . - . ID=g8195.t1.exon3;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 4558 4639 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 4294 4394 . - . ID=g8195.t1.exon4;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 4294 4394 . - 2 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 3884 3965 . - . ID=g8195.t1.exon5;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 3884 3965 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 3520 3644 . - . ID=g8195.t1.exon6;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 3520 3644 . - 2 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 3140 3315 . - . ID=g8195.t1.exon7;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 3140 3315 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 2794 2951 . - . ID=g8195.t1.exon8;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 2794 2951 . - 1 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 2398 2555 . - . ID=g8195.t1.exon9;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 2398 2555 . - 2 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 1958 2092 . - . ID=g8195.t1.exon10;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 1958 2092 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 1535 1672 . - . ID=g8195.t1.exon11;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 1535 1672 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 763 963 . - . ID=g8195.t1.exon12;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 763 963 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS exon 9 485 . - . ID=g8195.t1.exon13;Parent=g8195.t1 NODE_854_length_16723_cov_38.9716 AUGUSTUS CDS 9 485 . - 0 ID=cds.g8195.t1;Parent=g8195.t1 #PROT g8195.t1 g8195 MPAEEVSSRVGSNETLIHDDEDDDVIFDPMTPEVRSGAPSFHKLPNQGVLTKERISEGLSNMGRSADGLKHVYLKLTLSRCSLAEISLASRYIHIQDVDISFNSVADLSPLGEMRHLLRLNASHNRLTKILDFEPPLNLQEVNLSHNSINQMVDLSSHRGLRKLILDHNKIAQINGVSQCQQLTCLSLCHNMIEKMENLDGLALRELYLSGNGIKKIEKIESLDNLSVIDLSYNHIRSMKGLQSHALLHTIHLQSNEIVDVTEVKYIRELPLLRDLNLRGNPVQEMPDYRLALVFRVQCLNALDGDEVTAEEKIKAVNRFQPPPEVVAANDHARHVTRALHQPAHIRASTPVQSRDSSRARPFQPIVLFGPSGVGKRTMTRRMCNEFPDDVAMAISHTTRAPRENEMEGVDYYFVNQQEMDRMIDDGKFIETSFSSGAMYGLTAAAVEEIAQASKVCIINMEFEGVMTLKRTYLACRYILVLPPSSEELQDRIRRRGANTEAQIAGYVDKLGEYESYAAVPGFADEIIINEDPEVSYAVLKTHLPGDIRKKFRLASHSYFNVPKNKNIQSVNQPTPPLQSPKNTARLVRPTHLTGGGGAPPQSGQSVSSIATDGAQQSSIQKVLATASSNSPQLGRAGDQSRPRDLPPLILPGGAPQRPPPTDKHPPQRSNSGKSRASIISEDNSEDDR* # ORIGINAL: g4701.t1 original gene structure, not modified by PASA NODE_1192_length_13259_cov_43.7734 AUGUSTUS gene 3945 10028 . + . ID=g4701;Name=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS mRNA 3945 10028 . + . ID=g4701.t1;Parent=g4701;Name=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 3945 4134 . + . ID=g4701.t1.exon1;Parent=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 3945 4134 . + 0 ID=cds.g4701.t1;Parent=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 4429 6968 . + . ID=g4701.t1.exon2;Parent=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 4429 6968 . + 2 ID=cds.g4701.t1;Parent=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 7356 10028 . + . ID=g4701.t1.exon3;Parent=g4701.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 7356 10028 . + 0 ID=cds.g4701.t1;Parent=g4701.t1 #PROT g4701.t1 g4701 MARRSTDAGAGERLREADGPPERRSTLFTDQNTGANIEVEYMRERSGGMAEDDSFMETFEARLEPELRSTLAETIEKESKYDNKFNPRFKDASTETLYRQFYLREKGRWFRILLTIVFITSLVWTIYNGVAGTEYRGSRRVYFGAGIFSLVVYFALLICTKNTALYDRHWMAVSLVYASVTYGQLILIGGEAPQASPQAKIGLLLAAQIVTYSLAPLPFVVAALLGFVSSVAHQIVAASLAVSHTDNLASQIACNLLAFLCVNSLGLYYAVAGDLSSRRTFLQAREFARVQSKVKEKSGVPLKILQSCLPRVMAERLTKEMKFNQRQYTSLRGTEVVWMDNVSILFADVVGFTVLSTTMSAKALVKLLSALFNKFDELADKNGVEKIKTLGDCYFLVCGVPEPVEDHADRVVQMGLEMMITLSRFAARKRVPISMRVGVHTGSVLAGVIGIKKFHYDVWSSDVTIASLMESTGTPGRVKISEATRAASDTGYGLELAPRNSEHPLLANLPAYFVLGRRLESGVEIITDLSNEERAKWARALQEMADHEVPPEPTSPAAIRAHSTPSSPAAGRAGADASQVQGSGQQVAALERRPRSVIEEGTSGGVHAAGSLDTTTPEGRDSMGVVVVDVDRVPSAVDMSAAASEARMARRRNRGSIILSHRGDLLATIDATHNPKHTPAAVMEALAAEAGAADENHVGTITVETRDSTASSQSSADMSLLLEKGRMAVDGSAAACENELAVASIDAATHQRRPTGTVFFTSRGGTVHEVACVELAPIVATADADDCDNGMCADVSVVNGARGVGGVVVNVTAPDQGLPVGVGTTTLSTGNDAGGTSRSMRTASSIAGGGRECAHQGRERSDSGVMSGIAEMVPDVDFSKKQDEIVMSLKSKVNQYLLFFTDSQLEKEYQTRYIAKQRGMKVFVTGVSMSIVVFLLISAIEVIALPETTDMLARFLVIFFVLLCILLVATAKAFPAIYERICGCATAEYANKKQPLIVRAANYIVHARSLQWLGCLTLCLVALQALLAIPDCRDGRCTESCVDASGAAATCLSHAPNYAAEVAIVAMLNFTNFFRFSSAYRSALCMAVMVVWLVVANVMYNDVYKHTFPEVLIEMVLVTIAVVANNWQMEFSVRLHFLMKHALKVEVWHAGHVSQRTEYLVRNLLPSEFDENRLMASKTIAKARDNVAIVFCNICNFSDLFAVSGTKEKNDHEPVQSIDLSVEAMRLLNEFICEFDEMCDKMKYLSVEKIKTIGSTYMAAAGLPSFKAKPKPKAKSESESDAKFESKSESESDDEDPNSSNPSMPGLYPHIYALADFVLEMQRVLDRLNRDCFEFSVDKSNYFALRIGMNVGTVVAGVIGRKKIAFDIWGDAVNVASRMESSGEPGRIQVTEWTYEILKDVYEFERRGTVYVKGKGDMTTYFLIGKRKRRMSLYIERMIPDHEASKRLSAVIAHNNTPDTSRMITIEDLQRQHDDHYNSSRKSSDSAPDAAGAGIVDSARAQRDGNGSDRGSGGALHMFSADNGQGVAADSLIAAAQTLSASGTSPQADGESMELRALANVAPIGGNPARKRSRVSLANVSLPSLNEHEEQMDGGAAPDGENEHSAGNGMNKARSENWGTSLRQRAAMQPVVMHSSHSAPLSTSSSTADKDDAAHDGSGSPKSVSASAGVDAVATAPAVDCGGDDTRGWANGHIGCSEDIVDGDDGDAHSDAADDAPALLRRRATAAAARKTRSLSYFGAVVVEEDPTAVVMEMEGHGANGIPIAGTAAGVESSSVRSATVPILTLEQSASAVSVAESHV* # ORIGINAL: g4702.t1 original gene structure, not modified by PASA NODE_1192_length_13259_cov_43.7734 AUGUSTUS gene 11552 12982 . + . ID=g4702;Name=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS mRNA 11552 12982 . + . ID=g4702.t1;Parent=g4702;Name=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 11552 11956 . + . ID=g4702.t1.exon1;Parent=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 11552 11956 . + 0 ID=cds.g4702.t1;Parent=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 12204 12541 . + . ID=g4702.t1.exon2;Parent=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 12204 12541 . + 0 ID=cds.g4702.t1;Parent=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS exon 12825 12982 . + . ID=g4702.t1.exon3;Parent=g4702.t1 NODE_1192_length_13259_cov_43.7734 AUGUSTUS CDS 12825 12982 . + 1 ID=cds.g4702.t1;Parent=g4702.t1 #PROT g4702.t1 g4702 MCIRSTCFPVVRSFSITASSASDVTRNDALPKFTSDVIPAPAGDGQHGSQHRAHRGFLRPYQEACIAASLEHRARGVMRQAVSLPVGSGKTVVFSHLISRLQPTVPGATKTLVLAHRMELLEQTTRQVGLHNPHLRVELEQGSQKASRDADVIVASVATLGRKDSPRLLSMNPNEFKLIVIDEAHHAVAPSYIRILDHFGLGKKETGTHVMLWGCTATLVRHDARALGTVFDEIVYARRTKEMIEENWLCPAKVSVVATGQSIANIRKTGEDYNTSRLSQELNNPIRNALVVKAWKELAA # PASA_UPDATE: g4700.t1, single gene model update, valid-1, status:[pasa:asmbl_724,status:12], valid-1 NODE_1192_length_13259_cov_43.7734 . gene 82 2956 . - . ID=g4700;Name=g4700.t1 NODE_1192_length_13259_cov_43.7734 . mRNA 82 2956 . - . ID=g4700.t1;Parent=g4700;Name=g4700.t1 NODE_1192_length_13259_cov_43.7734 . five_prime_UTR 2893 2956 . - . ID=g4700.t1.utr5p1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 2749 2956 . - . ID=g4700.t1.exon1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 2749 2892 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 2391 2549 . - . ID=g4700.t1.exon2;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 2391 2549 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 1603 2181 . - . ID=g4700.t1.exon3;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 1603 2181 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 1288 1431 . - . ID=g4700.t1.exon4;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 1288 1431 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 1070 1159 . - . ID=g4700.t1.exon5;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 1070 1159 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 337 876 . - . ID=g4700.t1.exon6;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 337 876 . - 0 ID=cds.g4700.t1;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . exon 82 173 . - . ID=g4700.t1.exon7;Parent=g4700.t1 NODE_1192_length_13259_cov_43.7734 . CDS 82 173 . - 0 ID=cds.g4700.t1;Parent=g4700.t1;3_prime_partial=true #PROT g4700.t1 g4700 MEARHENECVEMEGNKENMVSGTPAGKDAGKDLDKEMSRKEKLLVWKETQKRKAESTPSDRPNKVPKTPLPATPRAKATAPAAHHGTPALQSREYKNFVANVSAAGARTPLPRAQTQWTALREQKAASSEKSSEKVAAVRQVGSTNAGGSAKGRPDPTAQRKQERQLLRYLGNHLDNPHSMFGTPPKQQQALTQTKPAGVHSKQSEQGSTAAAPALSEDSPASIVAVQAESTLPGVTVCKATAITGEAVVPHAEHSAPIEIASQPRSQESDSSSSSGSAGSGPLDELHEGYAKMAETLRDIAIEVGAPTDPVKAADSIKSWVFSLITALREEVEQVRFENAELRLIAETVEQQKKLTEDAENLAKYFSMMYKLATDSSSQQAPPVPHSSTPFGTPRHVSTLAPRDATPNPSFGNSDPIALARSLTEGITDAPDAPEDDDRMDVNTDPLEQTQLFAFLADEEEAGRDSIGGGSPSRALNRTITIDRRESGGRASFFSSSDEIIVPARNSACATVVRNTGIQTDDFVGRVLRAAKVAVGECDRLRFSNEILLQTMDEMRGKIEGAERAAADKMLMLENRHKEEI # PASA_UPDATE: g6994.t1, single gene model update, valid-1, status:[pasa:asmbl_10055,status:12], valid-1 NODE_93_length_41117_cov_42.7814 . gene 33516 36583 . - . ID=g6994;Name=g6994.t1 NODE_93_length_41117_cov_42.7814 . mRNA 33516 36583 . - . ID=g6994.t1;Parent=g6994;Name=g6994.t1 NODE_93_length_41117_cov_42.7814 . exon 35932 36583 . - . ID=g6994.t1.exon1;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . CDS 35932 36583 . - 0 ID=cds.g6994.t1;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . exon 35343 35800 . - . ID=g6994.t1.exon2;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . CDS 35343 35800 . - 2 ID=cds.g6994.t1;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . exon 34706 35138 . - . ID=g6994.t1.exon3;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . CDS 34706 35138 . - 0 ID=cds.g6994.t1;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . exon 33516 34448 . - . ID=g6994.t1.exon4;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . CDS 34138 34448 . - 2 ID=cds.g6994.t1;Parent=g6994.t1 NODE_93_length_41117_cov_42.7814 . three_prime_UTR 33516 34137 . - . ID=g6994.t1.utr3p1;Parent=g6994.t1 #PROT g6994.t1 g6994 MAATAQGLLAGVIILCAALHWAVHAAPAGGGTPFQWPKASMQQRTDADAAALKFLNGHQCTHDDLPMLTTATVQDYANNDRRRDASSSESTWAPFRITYSAVPGSIANLTASQADYLMGTVVPRAIERFAQTLLVIPVASNITLSRWCAMTYSGLPDSVPQEYRCYQYEPPTCGPTQVPSDHLGQQYECDYTVPNLDLSTPSKYCRPLAGGRGIPNSDLHIYISADPSWCGQYTVAAANTCVRDQMDRSIAGFINMCPYSYLALDPARSPIVLDGIVSVLRHEITHILALSSGHFPFFRDESGAPRTPRSADGMPPYDPTIGYYTSSTSTVAKFAENGKTVTKIVTPTVLSEVRSHFGCDGLNGAELEDGGGAGTAGSHWEQRVFYSEYMQGTTSGHEMSAITYAVLRDSGWYRTANSCVADPLTYGFKRGCEFVTGRCGGSADPQTFCSWKTETDCTPQLMLQGKCHDGCSADGMYHSLCADAGLTDTCSIYIGYSNGNCLDASNTASLGFFADQLRQYYLSNSAKHMERDQSCSNECVVGSVGCRVGSYECDECSSEERLVSGVGGSVKCDERGTRSGVGSHECDECSSEERLVSGVGGSVKCDERGTSSGVGSH* # ORIGINAL: g6990.t1 original gene structure, not modified by PASA NODE_93_length_41117_cov_42.7814 AUGUSTUS gene 16037 18273 . + . ID=g6990;Name=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS mRNA 16037 18273 . + . ID=g6990.t1;Parent=g6990;Name=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 16037 16175 . + . ID=g6990.t1.exon1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 16037 16175 . + 0 ID=cds.g6990.t1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 16403 16704 . + . ID=g6990.t1.exon2;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 16403 16704 . + 2 ID=cds.g6990.t1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 16958 17056 . + . ID=g6990.t1.exon3;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 16958 17056 . + 0 ID=cds.g6990.t1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 17468 17512 . + . ID=g6990.t1.exon4;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 17468 17512 . + 0 ID=cds.g6990.t1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 17657 17761 . + . ID=g6990.t1.exon5;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 17657 17761 . + 0 ID=cds.g6990.t1;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 18097 18273 . + . ID=g6990.t1.exon6;Parent=g6990.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 18097 18273 . + 0 ID=cds.g6990.t1;Parent=g6990.t1 #PROT g6990.t1 g6990 MVFDRARVTGPEESIPYPARPEEKKPLIAKRDKRADGRLPDHGRPVFARTHVITQANGSAYMELNRTKVTCGVYGPREFPRASPFSARGQINCEIKFAPFACSRRRAHQQDAEESDLSKFLEKALEPAIRLELFPKSIVDIYVTVLEDDGSALSAAIMCASMALADASVEMFDIVTACSVSFIGGRMLVDPSKTEEDGSDGSVCLACMPSLNEITAFVETGEATPKQIGTATEKCIGGCAQAYIVVRESLCKGAIAKERERRGLSVAADVAEGGDGSSGTSESQKMQE* # PASA_UPDATE: g6996.t1, single gene model update, valid-1, status:[pasa:asmbl_10056,status:12], valid-1 NODE_93_length_41117_cov_42.7814 . gene 39123 41007 . - . ID=g6996;Name=g6996.t1 NODE_93_length_41117_cov_42.7814 . mRNA 39123 41007 . - . ID=g6996.t1;Parent=g6996;Name=g6996.t1 NODE_93_length_41117_cov_42.7814 . five_prime_UTR 40846 41007 . - . ID=g6996.t1.utr5p1;Parent=g6996.t1 NODE_93_length_41117_cov_42.7814 . exon 39123 41007 . - . ID=g6996.t1.exon1;Parent=g6996.t1 NODE_93_length_41117_cov_42.7814 . CDS 39415 40845 . - 0 ID=cds.g6996.t1;Parent=g6996.t1 NODE_93_length_41117_cov_42.7814 . three_prime_UTR 39123 39414 . - . ID=g6996.t1.utr3p1;Parent=g6996.t1 #PROT g6996.t1 g6996 MAQIITGIAENPLLNVGTYTPVGQQDETGLLMTMITKLGYLLQVAFGHAGSQIISENMSHDGDLRPMVPGHKINAVFGFCDIRNFTDVTEGLKEKVMVFVNSVAEIVHEGVHKNGGAPNKNIGDAFLLVWRAADGDGGDDAQDDPSDQPEAASSSKDGAGVSSIVASRNTNGDAKGVSGGVRESAIKRSSNRSAPMTTPMAGDWNMTRRRMTSTADQGQMRRSDSASMNASVNGRAGALGKQGRMENERWAVSGLEEGVAGAVHSYLEIQEELNFSPKIKEIESAVCKFLPNYRVRMGFGFHVGWAIEGPIGSKFKVDASYLSPHVNIAARLESATKMYGVGNLVSGQFHALLSESEQRMLIRIDLVMLKGSNSPVYLHTLNPWLLDATGKAYFNNEIYALSPEQFEPVQMAATRYERAVSAYIEGSWRLAKELLSPFAEEEGHLSLAAKVLLDFMELTNYTPPREWTGVRALTEK* # PASA_UPDATE: g6988.t1, single gene model update, valid-1, status:[pasa:asmbl_10049,status:12], valid-1 NODE_93_length_41117_cov_42.7814 . gene 134 11133 . - . ID=g6988;Name=g6988.t1 NODE_93_length_41117_cov_42.7814 . mRNA 134 11133 . - . ID=g6988.t1;Parent=g6988;Name=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 11004 11133 . - . ID=g6988.t1.exon1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 11004 11133 . - 0 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 8946 10744 . - . ID=g6988.t1.exon2;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 8946 10744 . - 2 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 6417 8697 . - . ID=g6988.t1.exon3;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 6417 8697 . - 0 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 4672 6138 . - . ID=g6988.t1.exon4;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 4672 6138 . - 2 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 3499 4161 . - . ID=g6988.t1.exon5;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 3499 4161 . - 2 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 2801 3150 . - . ID=g6988.t1.exon6;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 2801 3150 . - 2 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 2263 2430 . - . ID=g6988.t1.exon7;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 2263 2430 . - 0 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 1739 1938 . - . ID=g6988.t1.exon8;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 1739 1938 . - 0 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 1405 1455 . - . ID=g6988.t1.exon9;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 1405 1455 . - 1 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 1139 1187 . - . ID=g6988.t1.exon10;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 1139 1187 . - 1 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 954 1011 . - . ID=g6988.t1.exon11;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 954 1011 . - 0 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 491 569 . - . ID=g6988.t1.exon12;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 491 569 . - 2 ID=cds.g6988.t1;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . exon 134 268 . - . ID=g6988.t1.exon13;Parent=g6988.t1 NODE_93_length_41117_cov_42.7814 . CDS 134 268 . - 1 ID=cds.g6988.t1;Parent=g6988.t1;3_prime_partial=true #PROT g6988.t1 g6988 MALLVGLTPCVKSTAPSLRLHSATHAIVFALAFAAAFAVPVATDDGDLKTCAGGSYLEIPADCVHINGSLLVRNSTEPNLPANLVSVRTVSGSVEILDNPGLESVALLHGLLHVGGSLVVSNNSALSSVASGFASVLFVGGDVVISHNPSLRSLDYFLPAINSSVGGTIYISLNPNLSSAGNMMPLIAMIAKDVTVRDNPRLVSIGGFNSTQYIGGSIRFMQNAALASVAGFGNLAHVGGEVSLIGSLSLSSIPSFDGLHVVDGSVEVGGTGLVRLAGFMDMLVLVHEIVIDSNPVMQDLDAFAHVMFVNSSFIVIDCPSLTTIRGALSGRTTSASGSAATPTPTSSPIASSNGTAVVDGLVISGCARLILVDAFQRIGSITSAFVLYRLPKLASLSPLLSLREVLVNGMVFYSSGGSASTPLNIEHSFPVLTTADTIIFIQIAAPTVSFPSLQTVHGQLTFLNCLGLATLRDFPALEFASQLFAYGNANLTSVGMFPRLTSLPTGLGFWLNSASVTSLSDVSASFPVLTTTELITIQQNGGLRTLAGFPSLVHAGAVRVVDNPELVTMTAFRNVSFVTTVIITDNPLLTEISGFLHVERASSVYVARLSALQSVTAFPILKRIDGSLFFDRAPLLTNITGFRSPVIDGNLQIFDCPSLESVRQLDGAVVKRGILFSSNDALTSIPSLNSNNESLGERLLLTNMPRLESLAGLGRANMSAVKSVIITNLPLLESLVGLESMREIHTAGIVISNCAKLVDISALNGIVSVTGGVSLITLGMQHLPHFRSLVRIVSGGLIISDNAFMQDVTGFDALTAVDGGIVIRYNPALTHIGGYPRLTTVRGDVQISDNILLRAVTGMSSLESLMGSLAIMRCPCVDASGFASLSILRDTLYIFRTYLGSLSFFNSLKRAGGVEVTHNKLLVVVNMVALSTVEGSLKFDENDMLVQIDVTDFGNLTSIGGLSVVSLDALRAINGFRALRTIGGDLSLSDNGALALFSGFESLTTITGSFVCARNTVVDGVDLELDFVGSVEFSDNSNANFMRANIREVGGGMTVRGNIALETVVVHVEHIQGDLTFGANDAFQSNNPDSGAEMWHIGRVNSVAFTNNRQLTSLDLSSVYNVTGAFAVDDNEALADVLLPRNFAQVESISVTGNNVLQSLTYTVPFLNLAAELSPTHDVVFTPLASPPLNVTGRVVITGHQLIEVSFLHKLEYIGSDFVFAAPSRSLIAAPNLTYIGGSLIIQTSLLTNMFPSLSRIGGSLMITPENGTKATWSDFPALVTVGGAVVVSNSIGLRSIAGFQSLVTIGAFLQISNNRNLLSVDGMALLRTVGASRFGGALFNNTFAVAIFGNSALTQIRGLSQVSRVAGPVIVSSNPHLCAREVDLTLVATGESVVNGNSEFDCVCQGRIVRSDTELLTGKNCILVVGNLVISNVTSLSPMSLVTGVTGNLEMYDNPTLSSDFGLGALQSVGGRLSVVNNAALSSLSLPQLSVVLGHLQFRENSALESIDMPNLVQVVGDLLLSGDRLKSASLPSLFSVSGSVVLRDLASWKTMTSASLFPQLQSVGDSIAVVNNSALVEASSFSLVSAIGSHVTFAHNPSLTHIHFAPTVTSLAGNVSVLNNRALTSITAMLPGAIAMGAVIMAALPRLASTTDTFGSATTVRESIVLDSVGDADTAQSYFLPFRRLAAVGGDLLIAKASVPTLAGLASLTSVGGSFVVRDCTQLRFDLPANASVGLSIATVGGRLEFAGNPLLERLSLPLLKNVTNGFALVNNERLMTANFSSLQSVGALDITGNSRLRTVDGFSSLLRVSGSGVDGDGKVATEGDVRPAMSIVDNAALSSIAGLASVVSIARGSLVIANNTALCARSVDLAGALDDGYPSYYAGNSAGPCCNFRVSQSLLDTDGFPTTITTITGTLAVTGVRDQSIWSVFRNVSNIGGDVIIRNNSGLGGSAGGLSLPVRIGGGLIIALNPILVSFDGLQIVGTLRYVSVRTNPVLSSFASLAGVTAIGPPPPAGSVSRRRRRRDAVAGGEDVGAGSDFTPGAGKLQPAIEIVDNPALRFLQGFRSLTNITGSVVISHNPSLCFADDVNWQYIVQNYSPTSTNISWNSADCGECNSQCTSLGCWGPLAFDCVACDEYIHGASICTAIADESPGSSSDTGEIVGGVVGGLVIAITAVIAVLLFRRTKLKLMAQREYSARIDKLVAIFGVGSPKTSVAGSSKNLDRLLGMVEELSSWELDRSTLELGEELGKGEFGIVHRATLTHSPDNFTVAVKSADGGLSLEEKIAFLSEASIMAKLKHANLVALRGVITREDPFYIVMDYLPHGDLRNFLRKSRTSAKIITLSRLVSFCRQIAAAMEYLASERIVHRDLAARNVLVGDASVVKVSDFGMSRDIYASEYYKKTGAAKLPLKWLAVECIEDRLFTEKSDVWAYGVTCWEVFSWGRAPYSHLSNADVIKEVSRGYRLQCPDDCPAE # ORIGINAL: g6989.t1 original gene structure, not modified by PASA NODE_93_length_41117_cov_42.7814 AUGUSTUS gene 12404 15184 . - . ID=g6989;Name=g6989.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS mRNA 12404 15184 . - . ID=g6989.t1;Parent=g6989;Name=g6989.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 12404 15184 . - . ID=g6989.t1.exon1;Parent=g6989.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 12404 15184 . - 0 ID=cds.g6989.t1;Parent=g6989.t1 #PROT g6989.t1 g6989 MAFGRVSDWASDGGVSQVSPSFAKLRRMRVRIAIIAAFFTVALFAFSVFGTANLDGESLLPFSRRTRAKYFPEWADIDFHDDPYEHEGMEVNDHAHQSSHESHENVVLPSLEKTHIHTHSGDDIDDKDVHGHNHVHALENQVNNPSFEEPFAVDQLDLETWWIDGKTWEVEPCINGITCLGSAGRMNCSNVFIRAAMQFMPIKDPTPHGKIVGLMFRVSSMGRNVHPQTSKGLPFYGMLALIAYADFTKDIIPLEFDGKSPGFRRRQKTVPVRGDKEIAYVVIMLTCYGYKGSVWFDDVALVPIVKGNPAQSINPGVPAASSRDVIDKHILFEPANREAESVKANSKAASHNSAFHVHDSEIFAGRVALEKCPPIYPSNVAQHYTVEQLGETTGDDGSDIVVHDHSDSHAHPEHAEAQVDGDREDHATRAHEHASEHSHAHNKHHQKLISIVTQATLDRLENLRSTIGTRWPGDVFIAVFVPRAEQPNLSELEEARSWEDQLATARAYVRSMLLGERVGASIINDSAANIGRRLLSDPPVQPHDHDGAGDSDKTHNINLNDGYQRVPTHIDAAAPAGEHDGSERGMEKHDHVNNADNNPIVSSPKRLDSDEHSNSTVHEDNKRGQAEGNRRSNEEHGMMVEEHFHEDDGSGVNNVEKNTHFHVYLVYPSTRTHLEYPINLLRNIGLREADSEYVFLLDGDFVPSPSFVKKFRDAVNTDVVQSLGDAAAKTAFVVPAFELTRVGKWYEKDAKSQKYLLPQLELSRRALELIPKEKAGIIQQIIEGKLMPFQLNVKPNGHGLTNYTRWYDANVPYHVDIPEERTTALSDYEPYLVLKKTEALPYFDERFTGFGMNKITLMLELNEAGYDYMVLPDCWTTHVSHNTTEYFKSFLSNVSHRLLNRVQRFEFLFNMRRRYGETGCDKISAR* # PASA_UPDATE: g6992.t1, single gene model update, valid-1, status:[pasa:asmbl_10052,status:12],[pasa:asmbl_10053,status:12],[pasa:asmbl_10054,status:12], valid-1 NODE_93_length_41117_cov_42.7814 . gene 22345 30315 . + . ID=g6992;Name=g6992.t1 NODE_93_length_41117_cov_42.7814 . mRNA 22345 30315 . + . ID=g6992.t1;Parent=g6992;Name=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 22345 22393 . + . ID=g6992.t1.exon1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 22345 22393 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 22598 22738 . + . ID=g6992.t1.exon2;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 22598 22738 . + 2 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 22883 23574 . + . ID=g6992.t1.exon3;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 22883 23574 . + 2 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 23688 23822 . + . ID=g6992.t1.exon4;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 23688 23822 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 23922 24053 . + . ID=g6992.t1.exon5;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 23922 24053 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 24181 24498 . + . ID=g6992.t1.exon6;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 24181 24498 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 24842 24901 . + . ID=g6992.t1.exon7;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 24842 24901 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 25007 25147 . + . ID=g6992.t1.exon8;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 25007 25147 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 25269 25381 . + . ID=g6992.t1.exon9;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 25269 25381 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 25527 25659 . + . ID=g6992.t1.exon10;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 25527 25659 . + 1 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 25828 26154 . + . ID=g6992.t1.exon11;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 25828 26154 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 26270 27259 . + . ID=g6992.t1.exon12;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 26270 27259 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 27386 27571 . + . ID=g6992.t1.exon13;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 27386 27571 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 27791 27937 . + . ID=g6992.t1.exon14;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 27791 27937 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 28197 28357 . + . ID=g6992.t1.exon15;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 28197 28357 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 28552 28717 . + . ID=g6992.t1.exon16;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 28552 28717 . + 1 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 28951 29007 . + . ID=g6992.t1.exon17;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 28951 29007 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 29152 29319 . + . ID=g6992.t1.exon18;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 29152 29319 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 29512 29768 . + . ID=g6992.t1.exon19;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 29512 29768 . + 0 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . exon 29960 30315 . + . ID=g6992.t1.exon20;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . CDS 29960 30113 . + 1 ID=cds.g6992.t1;Parent=g6992.t1 NODE_93_length_41117_cov_42.7814 . three_prime_UTR 30114 30315 . + . ID=g6992.t1.utr3p1;Parent=g6992.t1 #PROT g6992.t1 g6992 MVESVTVSVGADAAPLVAVLACHFAKDALNVSFKFDGAKDVEASLGGRTVSGAFTVARLIARLAGDARLYGSDALQASEIDHWVDVAASKLSSAAVSRQDYAELDSHLKIRTLFVGHTVTLADLAVFAALWKSGGAKYPAAAKDLGGLARWYSFVASNATVKAAVESLPQSHRPSSGAAASSSAVATEGKKHTGGGKFVSLPGAEMGKVVTRFPPEASGFLHVGHAKAALLNQYYAREFKGTLIMRFDDTNPAKEKDVFEKVILEDLAMLHIKPDVFTHSSDHFDYLMECAEKMIRAGKAYIDDTPVDQMRTEREKFIESKNRNNTVEKNLADWNEMKLGSERGIQCCLRGKIDMQSKNGAMRDPVFYRCKPEPHVRTGTKYKSYPTYDFTCPIVDSKEGVTHALRTSEYHDRDAQYYWIIDALGLRKPAIYDFSRLNLVHTTMSKRKLQWFVENNIVGGWDDPRFPTVRGVLRRGMTVEGLKEFILDQGSSKATNLMEWDKIWAINKKVIDPVAPRFTALGRDGLVKASVSNGPQKPYTEDVQLHPKDASIGTKKVWYSNSILLESEDAQSLVEKETITLIAWGNAIVNNISKDAAGKVTGVEVSLNLENKDYKNTKKLTWLSIGQEAQNVPVVAVEYGYLITKPKIDEGEKFEDFVNPNSRFETQLVAGPEIANIKKGDVIQLQRRGFFICDEVSAGPDKAIVLLNIPDGHQKNVTSFSSKLDEQKSQSVKETKERKDEKAAQKEHVSADPAKIAELEAKIAAQAEKVRKAKADKADKAVIDAEVAALLKLKGELTAAGGAAAPAPAAAKKEEPKKTAAPSAAAAAAPAPAGPKDPKVAELEAKIAAQGEKVRKAKADKADKAVIDAEVAALLKLKGELTAAGGAAAPAPAAAKKEEPKKTAAPSAAAAAAPAPAPAGPKDPKVAELEAKIAAQGEKVRKAKADKADKAVIDAEVAALLKLKGELTVAGGAAAPTAARKEEPKKEQKKEAKPAAKAEEKKGETKLGMEATKAGNFSDWYSQVITKSEMIEYYDVSGCYILRPWAFAVWDSIRAFFDAEIQKLGVENAYFPMFVSKAALEKEKDHIADFAPEVAWVTKSGQSDLSEPIAVRPTSETVMYPSYAKWIQSHRDLPLKLNQWCNVVRWEFKHPTPFIRTREFLWQEGHTAFATKPEADVEVLQILELYSQVYQDLLAMPVVKGRKSEKEKFAGGLYTTTVEAFVPSTGRGIQGATSHCLGQNFSKMFDITFTDPTKEDGSKSHVWQNSWGLTTRTIGVMVMVHGDDKGLVLPPRVACVQVVIIPCGITVSTSDADRKKVYEACDAAFASLKASGVRVRADLRENYTPGWKYNHWELKGVPIRIEIGPKDVGNSQVVAVRRDTGAKSTIPLASLVASVKESLETMHKDMFAKASAERKAHTKIISEWKEFVPALDGKNLVLAPWCEAKACEEEVKKRSTKSDDAAGDASGAAMGAKSLCIPFEQPKPIEAGQKCFQCGGEAHSYTLFGRSY* # ORIGINAL: g6995.t1 original gene structure, not modified by PASA NODE_93_length_41117_cov_42.7814 AUGUSTUS gene 37861 38806 . - . ID=g6995;Name=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS mRNA 37861 38806 . - . ID=g6995.t1;Parent=g6995;Name=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 38682 38806 . - . ID=g6995.t1.exon1;Parent=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 38682 38806 . - 0 ID=cds.g6995.t1;Parent=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 38306 38486 . - . ID=g6995.t1.exon2;Parent=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 38306 38486 . - 1 ID=cds.g6995.t1;Parent=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 37861 37989 . - . ID=g6995.t1.exon3;Parent=g6995.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 37861 37989 . - 0 ID=cds.g6995.t1;Parent=g6995.t1 #PROT g6995.t1 g6995 MDPGKIELKGYTMDPDGDRDEAIVYLMIYAITAVAILTLIGCHIFRVRNAYKEAEYETDDDDGAEDDDSAAAQSYGHVPPQDDRAWTLKQVRMRQQLEMYSKARAWLQANKHIVALANATGIGGKKGRRASHQRGSRISGVLPT* # PASA_UPDATE: g6993.t1, single gene model update, valid-1, status:[pasa:asmbl_10051,status:12], valid-1 NODE_93_length_41117_cov_42.7814 . gene 30362 33376 . - . ID=g6993;Name=g6993.t1 NODE_93_length_41117_cov_42.7814 . mRNA 30362 33376 . - . ID=g6993.t1;Parent=g6993;Name=g6993.t1 NODE_93_length_41117_cov_42.7814 . five_prime_UTR 33333 33376 . - . ID=g6993.t1.utr5p1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 33282 33376 . - . ID=g6993.t1.exon1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 33282 33332 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 33131 33202 . - . ID=g6993.t1.exon2;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 33131 33202 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 32881 32954 . - . ID=g6993.t1.exon3;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 32881 32954 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 32529 32580 . - . ID=g6993.t1.exon4;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 32529 32580 . - 1 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 32167 32253 . - . ID=g6993.t1.exon5;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 32167 32253 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 31849 31947 . - . ID=g6993.t1.exon6;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 31849 31947 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 31420 31521 . - . ID=g6993.t1.exon7;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 31420 31521 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 30848 31044 . - . ID=g6993.t1.exon8;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 30848 31044 . - 0 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . exon 30362 30597 . - . ID=g6993.t1.exon9;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . CDS 30423 30597 . - 1 ID=cds.g6993.t1;Parent=g6993.t1 NODE_93_length_41117_cov_42.7814 . three_prime_UTR 30362 30422 . - . ID=g6993.t1.utr3p1;Parent=g6993.t1 #PROT g6993.t1 g6993 MLSDEDDAYIAEEIYATQRELEWVLRTELPAVYMQLGTIMKECAQTLAASSAGGTNINTFPLTAPNDTVKGYVMLDGDCITKAEMTLKLPKWNKGASLKTSINWTSPYVLPQVQNAANRIQLSLGEIEDACMQNGLFHTREQACLVLDRVMAHIKQARDDLSLWTKQAPSASETDKNTMVFTPPLPNDLTIVFSVRDGHLIVRAQAYSVAMAAQQQRWMIGGASGMSIGRAKGAAPAPSSSVLAGAGADGTRTMDVIDHTEVDCAVPTLSKTLCYLEASHQLCQRTRDKLAILFPSALTQTR* # ORIGINAL: g6991.t1 original gene structure, not modified by PASA NODE_93_length_41117_cov_42.7814 AUGUSTUS gene 18538 21462 . - . ID=g6991;Name=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS mRNA 18538 21462 . - . ID=g6991.t1;Parent=g6991;Name=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 21289 21462 . - . ID=g6991.t1.exon1;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 21289 21462 . - 0 ID=cds.g6991.t1;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 20375 20827 . - . ID=g6991.t1.exon2;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 20375 20827 . - 0 ID=cds.g6991.t1;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 19649 20104 . - . ID=g6991.t1.exon3;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 19649 20104 . - 0 ID=cds.g6991.t1;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS exon 18538 19506 . - . ID=g6991.t1.exon4;Parent=g6991.t1 NODE_93_length_41117_cov_42.7814 AUGUSTUS CDS 18538 19506 . - 0 ID=cds.g6991.t1;Parent=g6991.t1 #PROT g6991.t1 g6991 MLLIFIEEEGLLEPSRFGDDHVRPSAHSKFRLEDLELSRFSVDLSSKPAYVGDVPSEEVFGWWTYEYCHMRHVRQYHVRPTGEVEDENLLGSFSVHKTEDGRTIDSGGNIAPLDVEPAARQPFESVDVPATAETPSADADADIGSGDDAMPEGSVPGTRARAKRTAVSKHTSPHNGAQSDMIPKAGYTWEYSRGTSCGVGSAPRKTIVQIRCHPDAGDHIASVVEPSTCVYHVVINTPRLCSIGLLDPLDAPADPIVCHPLATTKRAAARDHARRLPRSLPMKLKVEVTPADLMASSSKNDHYANVVSQHMLKSMPGIVRSLDIEIVLIGSVEGSELVALMAQKKADLEAYLETSVPERLRAMQSEDYHFDESTQLIRMERYYKIVLSDGLSSEDEAAADMSKKHPSVTSSVGVGELAEDAEEEDFSDDDDSDDDSDDSDDEGDDVDSAREDEGWPYRPNSQDVADGGQSGSKGTSEESLWDILKKSRTILDSVFADVQRLRDLEQLRAAGLNSPHAHSANPAGQSNAETATDRKADAIPDATEDRANVVRDKEAAPITPDKYVEMIIEESIGDRLRRLELEIDKMSPEELESFLSTLQMVDAKGGEAVGDHAEEGRKGENGSPSLESGVDAVDMAAGIANADAPPRSSTSKTGASVAEKPPVTQKFVTDDDEDEENLMWDSE* # PASA_UPDATE: g13018.t1, single gene model update, valid-1, status:[pasa:asmbl_10271,status:3], valid-1 NODE_998_length_14925_cov_42.2037 . gene 13355 14915 . + . ID=g13018;Name=g13018.t1 NODE_998_length_14925_cov_42.2037 . mRNA 13355 14915 . + . ID=g13018.t1;Parent=g13018;Name=g13018.t1 NODE_998_length_14925_cov_42.2037 . five_prime_UTR 13355 13419 . + . ID=g13018.t1.utr5p1;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . exon 13355 13437 . + . ID=g13018.t1.exon1;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . CDS 13420 13437 . + 0 ID=cds.g13018.t1;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . exon 13703 14200 . + . ID=g13018.t1.exon2;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . CDS 13703 14200 . + 0 ID=cds.g13018.t1;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . exon 14419 14915 . + . ID=g13018.t1.exon3;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . CDS 14419 14811 . + 0 ID=cds.g13018.t1;Parent=g13018.t1 NODE_998_length_14925_cov_42.2037 . three_prime_UTR 14812 14915 . + . ID=g13018.t1.utr3p1;Parent=g13018.t1 #PROT g13018.t1 g13018 MFPFAGDDTVVLVACVAVAITTLVVSRVFFGGKKQLVALDPTMKIPFRLVEKRELSHDTRLYRFALQSEKHILGLPVGKHMYLSATIDGKPVSRPYTPTSSDDDIGHFDLVVKVYYKNVHPKFPEGGKMSQHLESLKLGETIDVSGPKGRLTYAGRGLIKIQSGTNPVEIRNAAKIAMIAGGTGITPMYQVIKAILKDPQDKTEVRLLFANQTEDDILLREELEKMAAQHSQFKVWYTLDRPPASGWKYSSGFVSEDMIREHLFTAGADTQVFMCGPPPMIKFACIPALEKIGFTEANHFTF* # ORIGINAL: g13014.t1 original gene structure, not modified by PASA NODE_998_length_14925_cov_42.2037 AUGUSTUS gene 389 3327 . + . ID=g13014;Name=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS mRNA 389 3327 . + . ID=g13014.t1;Parent=g13014;Name=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 389 548 . + . ID=g13014.t1.exon1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 389 548 . + 1 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 925 1282 . + . ID=g13014.t1.exon2;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 925 1282 . + 0 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 1548 1591 . + . ID=g13014.t1.exon3;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 1548 1591 . + 2 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 1753 1904 . + . ID=g13014.t1.exon4;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 1753 1904 . + 0 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 2305 2486 . + . ID=g13014.t1.exon5;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 2305 2486 . + 1 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 2732 2828 . + . ID=g13014.t1.exon6;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 2732 2828 . + 2 ID=cds.g13014.t1;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 3129 3327 . + . ID=g13014.t1.exon7;Parent=g13014.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 3129 3327 . + 1 ID=cds.g13014.t1;Parent=g13014.t1 #PROT g13014.t1 g13014 YFGMFENGRAALYSYIGTVYGLDCIAFCGLVMVHQVQPTWSSINGDIVVTLFQTIWGISPIAASFVAHIFGRRMLKDFTFLINLSAPLYLLVGYMIPILCGTAQWAFAISTKTTGAYNTTFLYTIAGTFHYSNGTVNSHPGEVAAAGLFYEYFVGPWWDLWPPPSCNWGNGEGWSGGSWVVLAIFEELGWMGVLFPTLIIALDRKIYRTMLLTGFLWSIWHWPYIILGYFNEIPLGTGYQPGNSQTPLYYSLPMFTLTLIALRIVIIEITLRTVSIVPAIMIHAVHNSVIMSYLTQLPDFKKYGAAFFVGESGVFLCLFYWCSAAVFLVIRYRNEQSGEDPVGTLVENRNSTFRSPTEDSEKGASSAVASSGLSIVASSATTTDDISMRELKATQS* # PASA_UPDATE: g13016.t1, single gene model update, valid-1, status:[pasa:asmbl_10272,status:3], valid-1 NODE_998_length_14925_cov_42.2037 . gene 7434 9638 . - . ID=g13016;Name=g13016.t1 NODE_998_length_14925_cov_42.2037 . mRNA 7434 9638 . - . ID=g13016.t1;Parent=g13016;Name=g13016.t1 NODE_998_length_14925_cov_42.2037 . five_prime_UTR 9299 9638 . - . ID=g13016.t1.utr5p1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . exon 9239 9638 . - . ID=g13016.t1.exon1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . CDS 9239 9298 . - 0 ID=cds.g13016.t1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . exon 8870 8983 . - . ID=g13016.t1.exon2;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . CDS 8870 8983 . - 0 ID=cds.g13016.t1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . exon 8505 8672 . - . ID=g13016.t1.exon3;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . CDS 8505 8672 . - 0 ID=cds.g13016.t1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . exon 7903 8283 . - . ID=g13016.t1.exon4;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . CDS 7903 8283 . - 0 ID=cds.g13016.t1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . exon 7434 7644 . - . ID=g13016.t1.exon5;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . CDS 7489 7644 . - 0 ID=cds.g13016.t1;Parent=g13016.t1 NODE_998_length_14925_cov_42.2037 . three_prime_UTR 7434 7488 . - . ID=g13016.t1.utr3p1;Parent=g13016.t1 #PROT g13016.t1 g13016 MSQFSYSLPAEGLSSLQESRELKTGFLLKQGGSFKSWKRRYFVLYRNDADLYYFKTPKDTAPLGQISLRGAALAYADAEVHKSYPFKISNPYQHDSRIYFMSCSSDSERESWMKMLQSVSVAGVALLRAPASNSPAQKTTRSASQPVNQIDPNFTGVRAIAQPLSPSAASPSASQGSMSSVPSSVTSLASFNAPSNPWAPGAGGSGLGGNAGDASAKGLQRSQSTPPQQQPLDDGGLDPILLEKFPMDILVKMKEKLDEDEKVEIEHVTGKFRHLKHSIVEVLHDKLAGGLR* # PASA_UPDATE: g13017.t1, single gene model update, valid-1, status:[pasa:asmbl_10270,status:3], valid-1 NODE_998_length_14925_cov_42.2037 . gene 9924 13015 . + . ID=g13017;Name=g13017.t1 NODE_998_length_14925_cov_42.2037 . mRNA 9924 13015 . + . ID=g13017.t1;Parent=g13017;Name=g13017.t1 NODE_998_length_14925_cov_42.2037 . five_prime_UTR 9924 10026 . + . ID=g13017.t1.utr5p1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 9924 10148 . + . ID=g13017.t1.exon1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 10027 10148 . + 0 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 10436 10613 . + . ID=g13017.t1.exon2;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 10436 10613 . + 1 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 10954 11058 . + . ID=g13017.t1.exon3;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 10954 11058 . + 0 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 11269 11393 . + . ID=g13017.t1.exon4;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 11269 11393 . + 0 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 11917 12115 . + . ID=g13017.t1.exon5;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 11917 12115 . + 1 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 12310 12426 . + . ID=g13017.t1.exon6;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 12310 12426 . + 0 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . exon 12743 13015 . + . ID=g13017.t1.exon7;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . CDS 12743 12853 . + 0 ID=cds.g13017.t1;Parent=g13017.t1 NODE_998_length_14925_cov_42.2037 . three_prime_UTR 12854 13015 . + . ID=g13017.t1.utr3p1;Parent=g13017.t1 #PROT g13017.t1 g13017 MTNIKIFAGNSHRELAERIVARLGLPLGQARVSKFANGETCVEIIESVRDEDVYIIQSGSGDVNDHLMELLIMINACKIASAKRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLTVAGADHIVTMDLHASQIQGFFDVPVDNLYAEPAVIKYITENIPNWKESVIVSPDAGGAKRVTSIADRLNLDFALIHKERKKANAVSAMVLVGDVRDKNAILVDDMADTCGTLALAANKLIEAGAKGVYAIVTHGIFSGKAVEVINGSRLDAVVVTNTIPHEEKKKACDKIKTIDIAPIFAEAIRRTHNGESVSYLFRHVPL* # ORIGINAL: g13015.t1 original gene structure, not modified by PASA NODE_998_length_14925_cov_42.2037 AUGUSTUS gene 4104 6805 . - . ID=g13015;Name=g13015.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS mRNA 4104 6805 . - . ID=g13015.t1;Parent=g13015;Name=g13015.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 6534 6805 . - . ID=g13015.t1.exon1;Parent=g13015.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 6534 6805 . - 0 ID=cds.g13015.t1;Parent=g13015.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS exon 4104 6390 . - . ID=g13015.t1.exon2;Parent=g13015.t1 NODE_998_length_14925_cov_42.2037 AUGUSTUS CDS 4104 6390 . - 1 ID=cds.g13015.t1;Parent=g13015.t1 #PROT g13015.t1 g13015 MAPCGYSAWAVLVLISALLMPRDASAADVDVHPCPLRSGTSMTKIPRVLWAQTEDVLHLSFVVPYVVDESVSFNESHVVFCAWSRTKPDVSYGVALHVREDISPSDSTFERATRDIVHVTLQKAIPHAFDRPLVTPKPWYLGTDWKRYDPVGHDDDARSLEAQDDADVEELAEAHAEAEARAHARMEEEGRLDPAASLATAVGFEPLTSANFSLAVDEWAVTIVDIAFPWCRQCRAFRELERQASTWLHGDAGVRHLLASVDAREERDLARRYDVTCHWQCVFRVFIPDAPPSPLIYRGLPSSDAMGAFVLRWALRFNAATLNTRDAAALLVDVGGCRALAIAVGESEGVKDANEGAVRLLFAAADILDAYGDNLPSDGLDNAGGLCVARTLRPPRSLLSRFASIPKESVDACDGVDAVWILRKTGHAEHELGCVSTAGASASASASPTWLAAQLMAESVPLVSPFRSFRKARAEYSGGAVVVVFHSRDDSESVTALRNTLADRRRAHMTAGGVAAGVTISALHACVDCKDVSMGAVMQTIGLERSVLPAVAIIDLATTWDGDNSNEISDTTPDIDLMFHVPAEYARDQTGTAACTASTSADCASRAQWDQSALPLNSTTLARLLESFVEGKTPRTYRFGRGLDCINRRGGGGGGGESGSGSGIGSGMRATVEHVSRRGLMRAVAEGPLEDTVVFVHSCTPTANNSDSAECAPPKAAVAIARALELSGATGIAIHALDATTNHVPGSMRSASGTSGGVVLFKRGCASEAIGRSLSRGPLSRDARTGDRAGALALSACALRMGDDRPLTALTVARFLDAKCSTPIDVKVVAARLEDSYREAWGYTPMALPDVA* # PASA_UPDATE: g11351.t1, single gene model update, valid-1, status:[pasa:asmbl_7081,status:3], valid-1 NODE_4199_length_2036_cov_53.0903 . gene 734 1755 . - . ID=g11351;Name=g11351.t1 NODE_4199_length_2036_cov_53.0903 . mRNA 734 1755 . - . ID=g11351.t1;Parent=g11351;Name=g11351.t1 NODE_4199_length_2036_cov_53.0903 . five_prime_UTR 1450 1755 . - . ID=g11351.t1.utr5p1;Parent=g11351.t1 NODE_4199_length_2036_cov_53.0903 . exon 1273 1755 . - . ID=g11351.t1.exon1;Parent=g11351.t1 NODE_4199_length_2036_cov_53.0903 . CDS 1273 1449 . - 0 ID=cds.g11351.t1;Parent=g11351.t1 NODE_4199_length_2036_cov_53.0903 . exon 734 1048 . - . ID=g11351.t1.exon2;Parent=g11351.t1 NODE_4199_length_2036_cov_53.0903 . CDS 788 1048 . - 0 ID=cds.g11351.t1;Parent=g11351.t1 NODE_4199_length_2036_cov_53.0903 . three_prime_UTR 734 787 . - . ID=g11351.t1.utr3p1;Parent=g11351.t1 #PROT g11351.t1 g11351 MAAQLPLLVRKNLRDTEGKLKESLERISTATGLSGFVVEFFPDTQTVSDACNAAGYTNRIGEVYYEGYLPAIADTIEKACGDDMVKEELLKGLASKKIIVGVDENAGSDYQNLSFQDGALRVLSTPSNVWTNVGDISNFALENIL* # ORIGINAL: g8616.t1 original gene structure, not modified by PASA NODE_1254_length_12679_cov_41.947 AUGUSTUS gene 41 2255 . - . ID=g8616;Name=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS mRNA 41 2255 . - . ID=g8616.t1;Parent=g8616;Name=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 2151 2255 . - . ID=g8616.t1.exon1;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 2151 2255 . - 0 ID=cds.g8616.t1;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 1829 2032 . - . ID=g8616.t1.exon2;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 1829 2032 . - 0 ID=cds.g8616.t1;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 1657 1732 . - . ID=g8616.t1.exon3;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 1657 1732 . - 0 ID=cds.g8616.t1;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 534 1521 . - . ID=g8616.t1.exon4;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 534 1521 . - 2 ID=cds.g8616.t1;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 41 232 . - . ID=g8616.t1.exon5;Parent=g8616.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 41 232 . - 1 ID=cds.g8616.t1;Parent=g8616.t1 #PROT g8616.t1 g8616 MGNDHASADPVVASAYAPLPMEVRNLYFEARALSKVEDSPEEPFKSKYDARAKLLTVKASIEGCLTAARDAKAEHEKACAERYLDMIAVVDHLLGVNFVQTEELHSGQECLDRANARLSSRTQTAELAGVTIDCSNQLGILWSHRGETHRAMAYLRAADEAYCAFKTHTTASVPWTVDELFEETSRAVAASDARAEEERGSEPTASQLNVSPGWKALESTHTHTLYYLAQTHGQLGDRQRAAHLCRLTLERQLLYGELFDKFEWTANCMGLSQFYCAEGRFEDARDCLGAARAVLPELDAAVAPPAPARDGEDDGTAMEAEKLAQRRADLDMSWAAYYLALLRASRDRLLRGDENGNGDAELSDGAPAGPGEKDREPVPGARFAGLDVAKYTAGSSTALAMDFASARDIFLKGQDALARARRTYVLDGYVSEHVTAAQQHSQLFKLLSMFETNLKRKCQMLKKRVKILRPLLGELSQQHYLQLCRQLMYEVAETYSEIMDVRLVMIGKTSPSPKEIAKVNK # PASA_UPDATE: g8617.t1, single gene model update, valid-1, status:[pasa:asmbl_967,status:3], valid-1 NODE_1254_length_12679_cov_41.947 . gene 2717 6473 . + . ID=g8617;Name=g8617.t1 NODE_1254_length_12679_cov_41.947 . mRNA 2717 6473 . + . ID=g8617.t1;Parent=g8617;Name=g8617.t1 NODE_1254_length_12679_cov_41.947 . five_prime_UTR 2717 2995 . + . ID=g8617.t1.utr5p1;Parent=g8617.t1 NODE_1254_length_12679_cov_41.947 . exon 2717 4502 . + . ID=g8617.t1.exon1;Parent=g8617.t1 NODE_1254_length_12679_cov_41.947 . CDS 2996 4502 . + 0 ID=cds.g8617.t1;Parent=g8617.t1 NODE_1254_length_12679_cov_41.947 . exon 4792 6473 . + . ID=g8617.t1.exon2;Parent=g8617.t1 NODE_1254_length_12679_cov_41.947 . CDS 4792 6365 . + 2 ID=cds.g8617.t1;Parent=g8617.t1 NODE_1254_length_12679_cov_41.947 . three_prime_UTR 6366 6473 . + . ID=g8617.t1.utr3p1;Parent=g8617.t1 #PROT g8617.t1 g8617 MAPTARDAHSADSGVPALSLTSGLPLKHTTGLFMTRRVKRRKTIGKQTLISRIRAFFRPPWLTAPVILVCLVWIAFGIAGSLLLNQYMVRREDDTIVEGVRIACQSFRSDLLATVSHSRSLLDTVASAFVSGEPTMSALATATQVWTNGSFTSRARPVGVEWFMWLPRVNASDRLAWEATYNRTITQYDYTDGLQLVEAASRPEYFPTAFIGSVSASFSQYDPRMIGVDFGDSEAASIRAAAEKGIEGSSGPIFITPANALVSHANAQAAIYIPFYSGSRLPSTVDARRALFTGIGYVFINCSKALLAASHEGGGPGREHTAHSEEEEHAREGVYAFVADDTPGTAGKPDEFTIFVRPDSFIAPRPERDPSGHGPRADHHKNKTGNVGSSTLLQFRNITTMDDIRRIAPKGIILSVQMQSAMRTWSIICIPTDKYVEQNHNPVSKFVAAAVSVGSVMLCFVTLLIAKIMHVSCQRHEARKMAMDEAVRGRKLAQDMIGYVNHEIRNPLNGILGLMDLSTMSLKELYNLSDALTAAKGPVLHGGAQAIADSARSSIGVLTADIATARNCCQLISHIVNDVLDIRKIEEGRLVLSSSPLDVGKVVRDAVCIIRPKLEEKPQVSLVTECTEGLWVFADEFRVKQLLLNFLSNSVKFTDRGSISISAITDATSYGVRFSVKDTGHGIRSDQQQLIFKPYVQVRPTDGTRYTGTGLGLFLCQRLVELMDGIIGFESEYGIGSTFWFELPMSMNPATDHESLHESSTCLPQWTGEVKVSVAEEEKSSERRIAGAETHSSASHVENFSEMMLLGDAVLSVAEPSAPTIAVSHTDCPTLPTMVGGGAGGTAVSCAAGACPPVSEATNPPTPTKLPRFRLLVVDDVMVNRMVLRRQLEVLGHEVVMCEDGQKAVDVARKKQFDGIFMDVQMPVMNGLEATECIRRFARSSSAEAGVAGNASSADAVDVFPATDSHVPVFGVTADVTDQDVLTCESHGMDYVIGKPATQDSISLALSRFYDPLTKSLSRSHGRQAA* # ORIGINAL: g8618.t1 original gene structure, not modified by PASA NODE_1254_length_12679_cov_41.947 AUGUSTUS gene 7507 11465 . + . ID=g8618;Name=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS mRNA 7507 11465 . + . ID=g8618.t1;Parent=g8618;Name=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 7507 8243 . + . ID=g8618.t1.exon1;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 7507 8243 . + 0 ID=cds.g8618.t1;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 8453 9189 . + . ID=g8618.t1.exon2;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 8453 9189 . + 1 ID=cds.g8618.t1;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 9482 9820 . + . ID=g8618.t1.exon3;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 9482 9820 . + 2 ID=cds.g8618.t1;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS exon 10171 11465 . + . ID=g8618.t1.exon4;Parent=g8618.t1 NODE_1254_length_12679_cov_41.947 AUGUSTUS CDS 10171 11465 . + 2 ID=cds.g8618.t1;Parent=g8618.t1 #PROT g8618.t1 g8618 MDTRVECADPGPSASATAHVRQMGGPTSSSTPTQNVLTYRRSGIMGVDAATASKCTFSSVSTSASKSTTGDAGLGGARLSVASRRSEATESRGSSDGRRLCRPPEWISWWLVLSCVFWVVFGITSSIVLRHYILSTNNDDIERKFDDLCASFTKNVGNALMHTRSALDVAAAAFATNANLTEPQFKAVMAEWAHGPMWSRPVPPGVNWVVWLPLVTNITRAVAETSGPCGGNYTIWQFVFGRFGYRVIPSPNKSLYFPMVYTAMTGSEIRTYDATTCGLDFGSYLHNAFMDSAANATEGATGPLYYTPQMTFSSVDDPHIGFYIPYYDGGRVPPTPVTRIAALKGFGFAFLNVSASIETLGDYSGMMMFIVDETSGGFDVVHSSRSVRSRLDINSLATDNIVGRAYLSVAGRQWEFYCLPTRSYVEDHSGSEAVLVVLVTVIGSCLMILITGLLLRNRHVTHEKHRAVRHAMNEAVRGRKLAQDMIGYVNHEIRNPLNGILGLMDLTGLTLSEISKMQAMISSGSFVTSSDSSSAEAVRSNDAPLLVHTSASTADPHDDHELPQRPLVDRNKPMRLDEIGSVIRQQVDVLSADIETARNCCQLIGHIVNDVLDIRKIEEGRLVLSTSPLDAQRVIQDAIRIIRPKLEEKPQVSLVIECPEGLWVIADEYRVKQLLLNFLSNAAKFTDNGSIVLSATLRVDVNLVRFSVKDSGRGIRESEKQLIFKPYVQVRPTDGTRYTGTGLGLFLCQRLVELMDGTIGFESEYGIGSTFWFEIPWLPDSSQGYSIDEAYGQFGDGSAQPAEGNRVNSVVVTVLESEGREAIPMASMGSNNTSIAASLGRTQHNAAGLRSPVVGPSSPADPRVQSSLDNVLRGTLGIASTAGEGSLPMPPPDRPMPRLSVLVVDDMMVNRMVLRRQLEVLGHEVVTAEDGTKAVDACLARRFDVIFMDVQMPVMNGFEATQRIRDLAPGDSPTSGDVLIFGLTADITPDDVRACIAAGMDSVVAKPATQDIITATLRQSFDPVLGRLVRRSSYS* # ORIGINAL: g11827.t1 original gene structure, not modified by PASA NODE_760_length_18047_cov_42.4505 AUGUSTUS gene 432 4335 . + . ID=g11827;Name=g11827.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS mRNA 432 4335 . + . ID=g11827.t1;Parent=g11827;Name=g11827.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 432 1928 . + . ID=g11827.t1.exon1;Parent=g11827.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 432 1928 . + 0 ID=cds.g11827.t1;Parent=g11827.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 2095 4335 . + . ID=g11827.t1.exon2;Parent=g11827.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 2095 4335 . + 0 ID=cds.g11827.t1;Parent=g11827.t1 #PROT g11827.t1 g11827 MMAGAVSCAASTTADTRQLPMLVKVDAAFDFSRLPIEIFLVHIVSYLDTYEVQSLSHTCSTLRRVLKRHRKYKIKESVAIKYAVDSAFREHVCSIIPRNRICLLVEESDLIVAGIAPEYFGALEGVHTLTINRLTASAHADNSFDSDEYEDAEAQYALEETGAAAAPTTLDVSPLRSVTCLTLESFNIVDVACLGAVHTLSLVRLGVADVSALGRVHTLLLDSCPKVCDVSALGAVRSLSIIHCTGVSDVSSLGRVHTLSLIDCRNVVDVSALGGVHTLHITRYPVADVSALGSVYDLLIELCPITDVSALGNVHTLSLMHLSGPDFVDISPLRNVHTLEIDSGQVGVNALVLSGGFSLTLNGCSEITPEMIAIPRLNYDDAQRPSLLPSYLTAFTAALSQASLTGAQAVASILSASVWAFAVGPKLKHQKKNTAVLMRDAMRAVTTAVTEHKDSQAVQLYAGMWTAYARAAQMDSRDCDAAQVMCAVSALRVWMHDAETAACEALTSLTRDGDGMAAFFRLGVSELLVANVYSHSHLNSRPVIRLRAKVAALLCMFALKDVNAQSFAAANMDFLVRAACQNPSDVMLKEAFFTLLAKWKGVAATIPTDCRVLPRRTKPGDSEDNNVAVVLSDNCLRMHYDATRYESVALEGEPMDMHVRNGMLAFMESVVVQTLGCRILHDEYENDDEASSSFPHWVTTALRTNPGYYPLVTGAFHFANALRTSKNTPYFGGRCCVEHNDAPRFVKGIARAMGAHLDDAEIQLLGCRALTDTFHPCGLERFMGEPSARHATYAVVQGMKALPHYWRLQHAGLLFIVAVAKYAIRLEEFDGFELFSEFDVFPVLTDVILSAKCNTAKLTVLGVLSDLSTGLVGATALVRFGFAAIAQDILLSSHIATGEQSASAIKAGGRAVQRKTKAKNELLRPLPPGCMRHSFGFEDVAAFRLLANLSYAKSRAFFKSPEFIVAVVDAMSHSIGLPDVVEAGLHALRRLARDSGTLDILRSHSGSVATLVTALNQDLTRKLPPLLGLCTLLSSLCGDTADTFASLTSVGVQQIGFILGTNDVKRAAGYSLESVCDAMRLLCIVAGAHIIGKRHRELLIDCLHKHRMDVRIQYYGRLALYRLCAHDEFLRSMLSELGSLEIWMLARWLLRHSWNEDCHSTHHAHLVSRVTYRLVARLVMIHRDVREYVLHDAAVELADVDRVKEAIKYAESGGDMSLPLASTTTVKEHWRDLRGGSWLTNGRQR* # ORIGINAL: g11828.t1 original gene structure, not modified by PASA NODE_760_length_18047_cov_42.4505 AUGUSTUS gene 4895 11860 . - . ID=g11828;Name=g11828.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS mRNA 4895 11860 . - . ID=g11828.t1;Parent=g11828;Name=g11828.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 4895 11860 . - . ID=g11828.t1.exon1;Parent=g11828.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 4895 11860 . - 0 ID=cds.g11828.t1;Parent=g11828.t1 #PROT g11828.t1 g11828 MGAGRGRRGPRNILPVELHPIRTHDTAVAVLCGLSEGGTAVCVAGKCVGAVLLRGNESDSARVVSAQKNALDALRTALVALAKGLKSASASVGDGQAARDIASVCASMAHLFFVPHQQLWARKLLLQIVLACHATLGIGIIHATTTAFRLAFELHGADADSLASIGVACSQLLESAGDLGLKTVEKCSYDVLSLYATLFGHLEWMLSNPNNATETLKSCVRFLQKLCRHLSMSIASASEHTDVPDGDASFQVHLEVVIRASLDILADDRVRVETLLLAGLCVGCSVAILAHNTNANSSITDTLAANKHDNDAIVSRAVNILLRGTASSSAPPHFFTPRTRDSLRWAGLAACSPQTQLALLRGLITAVPAESLCSISCPDWRGMVPHVSFPASPDNPAHLLLENLALLPGTLPNAFVHVMLGVAACYLSHADPATAGLATQVLCAWIDAVGRTLYRTVPAVTPCNDPMEVDSVDAGVTHRATTVTHTATHTATHTAERQRGEAPGAQSNAPHGTAPTTQTAAKAGLLGEIVSSDALLSLCFNHARAHWDSPEDHLLAASRDVFARILTIGGSQFATACAERLVAIDPGVRTRYSMLAHTIRAVGSVRILSMHPPLTSELISCLSSNILTPPAIEVYDALLRNRWADASAPGAVEWWVADVWPLVASALRGRAVQEGEEADNEDGGGDREADRSGPDSRAVVCKNVAAMLLPRTMALLPSVAGALINLATQALESDGEEGMRVAIAIVRAVRTGGHLVEGTSEGNAPTAFGPIPADALVSAVRCPDESLRVDAAALAAVNPKRTAALTPDECRVLAHFVCANGNSHSTHFRQQMTALLRVATFRMRDYAAAAAKRTSARMAYNSKGTKATEEAAPEVETDDGALRALGAFSEWLRAVAALYLYPGGSFQRRAVGLRLMSVLFEAFGAAGGGVLGLPASSATSNSSNNSSNNNNNSNSNNSNFNKGGPSISTALCMSLLGCIDTTFEETSTLARGLLVAHVVACRSSAHVTSPLPPPLSDCAPAGKDGSQSILSHPGPLVTYAWRLLSGVRAADCLSGTNWLRLALEVWPLNLGVHMCGGASGACRDGEDAILCALTALVSAADAQLEDAKADLLRASRSKPIHGFVLAIRKCLEAIADAYLHNKTSNWTAASRKQRPHKWRALISRIVNLSCACMTFVLDVLSGGTSAIPDFADIEVSLDEAVAMPASCEGNVQQGEGASGDRDRMYACLWLTLRESSELCAAVATMFGIERPRVSFASSAITKDDDVIHKAKRQKVSESGAPVQATDPSPHIEDKNSNNTDSGACDENDAVDHSTTAASESAKPTPHSWLLSLDGLRMCGDAFISLLTRCRHRGAIETGGTAFARVCRQLLSPAEGGSFTATCEDWLERALSHLESQASITRRGAGIPLAVQALLAGDASRERRMTRTCVARLIHAASVPTPDDADPNVDLPQVRACNCLRALLTDAVVGPELHLFVGSLASLSVSMIRSNLWPIRNVGTLLFGAVASRLFGTKNKAAVALSELIALHPALLGVFEDQLGGDLGASPHPGVFPTLAMIARLPPDVRVADVRDPRVDALCESVLRHTGSPVGHVRLVAGRALVAMFPPSAYASVCSRALSDALMVSSHAREGPAGGLSGRQNSMHGALLASLELLRAAGEHSRREVAGSILSLLLSTAEHAHVLTLANGCLATRTLAVDLAFECFHAIGVSTSARDVGDQHDNDRPTESHGDPTAIAMLAVRMATTLKDLADSIARDSAGKGAARSDAVSGPALGLSIAFWDYARAVVRASLSLSHAFGMNGVEIACAFLTCGEGDVRRACLMHLTGKDLSYSGANAVESPSIRALLHGNGGLRIASVCVSIIIEDSGASRDGGLSQSTRLAPEDINALLSIIGVVSDWHICVSGHRGALWNAGALSVAEAVGRREGGSVAASWIVVLGRLVRDAITGSSNCEFSSAQVAGMVSAWAGYVNAFAAPTRPDTLRLAAVESLRKAGSASLRASHALDVAASNLLWDAVFRLLQDEDEGVREETAAFVYGCAALLGAAGEDVDGVAAKRVAEVYTIALGTAHDVCVAWMGAGEDAVAFFAGRLERDDARSMHCPSQSDGAVLPWMPSEASVPKDGGTGTSATNATGAEQAMVIFEEEPANMYAEDALDAQYDAWALASIVQSARWVAVVDVENKRRVLDACGRAVTDLSAFVSASARQSTVRYAPCFQAVYRRLCMVWALSSAVDRESTESIASVIVRLQSMRTELHPALLHTADDILAKLRPSNAVGGKEVLHDGAACTQDIRAVAVATGSELFFNAPAVGLGVGFLSRATRLLY* # ORIGINAL: g11830.t1 original gene structure, not modified by PASA NODE_760_length_18047_cov_42.4505 AUGUSTUS gene 16812 17912 . + . ID=g11830;Name=g11830.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS mRNA 16812 17912 . + . ID=g11830.t1;Parent=g11830;Name=g11830.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 16812 17912 . + . ID=g11830.t1.exon1;Parent=g11830.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 16812 17912 . + 0 ID=cds.g11830.t1;Parent=g11830.t1 #PROT g11830.t1 g11830 MLPVWILTLAAALASLVVGPCVYASSYTADAPASADAPLYVHTAYGASATSQLSVSWYTKTNVSSTVRYGISAGGPFLTTVNGTTRTYNATVGYFHDVHLDGLTADTRYYYVCGSEDGGWTKELSVSTTPSSLTRPINIAVFGDLGVKNSGVVVPVLNRLASSAQIDFVLHIGDISYADEYSNDEYEGIWSQYMNEMAAVFEAVPYMVCPGNHEASGGYDNSRAPFVAYNYRFSMPSPTQRTNASHSMWYSFDVGSFAHIVSIDTETDFADAPEGADLFGGDSLAWLESDLASASARGFKFIIAMGHRPIYSSAVGYSKDGIPLDVSAVLQARFEALLAKYNVSLFFVGHQHAYERFVVFQLRDCV* # ORIGINAL: g11829.t1 original gene structure, not modified by PASA NODE_760_length_18047_cov_42.4505 AUGUSTUS gene 13554 15723 . + . ID=g11829;Name=g11829.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS mRNA 13554 15723 . + . ID=g11829.t1;Parent=g11829;Name=g11829.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 13554 15140 . + . ID=g11829.t1.exon1;Parent=g11829.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 13554 15140 . + 0 ID=cds.g11829.t1;Parent=g11829.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS exon 15478 15723 . + . ID=g11829.t1.exon2;Parent=g11829.t1 NODE_760_length_18047_cov_42.4505 AUGUSTUS CDS 15478 15723 . + 0 ID=cds.g11829.t1;Parent=g11829.t1 #PROT g11829.t1 g11829 MWRSLTVGGCFRCGRRTVWRIVLLSVSVAVIAGSAAVGLTLNSVNNVPVPQLIRSRYAAFSGGNWLPRLFEQTETGNHADTDNTDGNADASPMHTDVRSADDKVGVRLPAPSALIFGEDIGENNSTRNILAYLQSIQKPNLPSVPRDIDGKIAKRILVLGDPLWATQYGALYRDAAAAVRTDPAVGITLVSTSTVREAAAGAIEATNGVTIGILAKCVCVNSLSEKCIPYNDYASLPSHVRVSAICGLSPSVRIGKDVFCEAMTSALEGFDPPRASALTERQGGGVEAVKGFAAANDLADQRAFTFPCFVLPREIERLRVASSTNAGNWPFIPGQKWLIKATDRHSGQGMYSVDSVDELVQQFDSSPMPESASQKPRVAMPLMHPPFLFNGRKFDLRVYTLVTSMTPLRVYIHEEGIVRLSGEQYKTNATSAELTGAQLLPYSHAKGATSEPPTLETFATLRAHFAALGHDVNALFERIRSAIARVFLSFEALLLNPVNGGTTPDNSRGYALFGVDIIIDTDLQPRVMEVNANANMLHTSGSSVIANAKLPMARDVLRMIYGDGGDCAAALHRRLSALPGVTMVNGTDNDCGNNRLCVTEADLAILLESR* # ORIGINAL: g673.t1 original gene structure, not modified by PASA NODE_752_length_18123_cov_39.597 AUGUSTUS gene 1 4315 . - . ID=g673;Name=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS mRNA 1 4315 . - . ID=g673.t1;Parent=g673;Name=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 4048 4315 . - . ID=g673.t1.exon1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 4048 4315 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 3611 3732 . - . ID=g673.t1.exon2;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 3611 3732 . - 2 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 3380 3451 . - . ID=g673.t1.exon3;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 3380 3451 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 2750 2912 . - . ID=g673.t1.exon4;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 2750 2912 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 2321 2610 . - . ID=g673.t1.exon5;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 2321 2610 . - 2 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 1665 1895 . - . ID=g673.t1.exon6;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 1665 1895 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 1218 1268 . - . ID=g673.t1.exon7;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 1218 1268 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 827 988 . - . ID=g673.t1.exon8;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 827 988 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 397 515 . - . ID=g673.t1.exon9;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 397 515 . - 0 ID=cds.g673.t1;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 1 67 . - . ID=g673.t1.exon10;Parent=g673.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 1 67 . - 1 ID=cds.g673.t1;Parent=g673.t1 #PROT g673.t1 g673 MSSASESESHEDHSEDEADDSHDDDDSHHEDGEAPAEDAHSAGRAGSTKSSKYESHEELGVGERRAILAMQETPLEKEAYDMLAANADTAKEPFHVGTLTQSPPLTEDQIEELESHCARCVRKADSDRKASLVCNANDAMDAIFGSVIEKKRAAEIEKLKALEYVPPVPLNNIGKRVLATIREATGLLAKDKKSNDPYCTVECDGVAFVSDVRRRTLNPEFDCVCTWEDPSEKAELKIQVWGSVLHAESKSKSTDSLHNKEGGDAGAKGGAGDAIKIPLHPKDNFLGTVVIPLHPILSEWQEIDKGKMAGKMAIIYFRKWRMQDYKLQKRSSRSHVAGSVHVIIKVEPIVIAQKPPPTIVHEEKYPKPDRDRALSFYPLVVQAIFQDLLRRNPRNWNGQVPPAYAFLEDEYCRYYKIPALERHVMYYEHLVRATCCVTARLNDVAPMLYPPLKRAYAAFEEANFKQGYAEDLMPNFVAALRLTQSRVLDSVRRYKECFRDSAGPGFEAALKCLVL # ORIGINAL: g674.t1 original gene structure, not modified by PASA NODE_752_length_18123_cov_39.597 AUGUSTUS gene 5249 6935 . - . ID=g674;Name=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS mRNA 5249 6935 . - . ID=g674.t1;Parent=g674;Name=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 6828 6935 . - . ID=g674.t1.exon1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 6828 6935 . - 0 ID=cds.g674.t1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 6630 6704 . - . ID=g674.t1.exon2;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 6630 6704 . - 0 ID=cds.g674.t1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 6366 6482 . - . ID=g674.t1.exon3;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 6366 6482 . - 0 ID=cds.g674.t1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 5974 6141 . - . ID=g674.t1.exon4;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 5974 6141 . - 0 ID=cds.g674.t1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 5588 5797 . - . ID=g674.t1.exon5;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 5588 5797 . - 0 ID=cds.g674.t1;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 5249 5443 . - . ID=g674.t1.exon6;Parent=g674.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 5249 5443 . - 0 ID=cds.g674.t1;Parent=g674.t1 #PROT g674.t1 g674 MGRDIADNFRHARVVFEEVDEALQLRLSRLMFEGPENELQLTANAQPAILAHSLAVLAVLKAEQGIDPSRIFAVVGHSVGEYAALVAAGCLGLGDAARVLRARGNAMQLAVAGVNTSMVALFPISMEAAFDVAKRASDALGRGHVCEVANVNSPSQVVISGTAEAVAHATQLARANHKARSIPLKVSAPFHCSLMKPAADAVAMALHETKFAAPSTKVFSNVTAKEASHSELKGLMVKQVTSTVLWAPEIHTCNGACVDATGRPPTYIELGPGTVLQKLIKQIVPDSVAL* # ORIGINAL: g675.t1 original gene structure, not modified by PASA NODE_752_length_18123_cov_39.597 AUGUSTUS gene 7767 11257 . + . ID=g675;Name=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS mRNA 7767 11257 . + . ID=g675.t1;Parent=g675;Name=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 7767 7859 . + . ID=g675.t1.exon1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 7767 7859 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 7954 8174 . + . ID=g675.t1.exon2;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 7954 8174 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 8450 8531 . + . ID=g675.t1.exon3;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 8450 8531 . + 1 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 8725 8766 . + . ID=g675.t1.exon4;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 8725 8766 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 8952 9095 . + . ID=g675.t1.exon5;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 8952 9095 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 9258 9361 . + . ID=g675.t1.exon6;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 9258 9361 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 9533 9615 . + . ID=g675.t1.exon7;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 9533 9615 . + 1 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 9819 10027 . + . ID=g675.t1.exon8;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 9819 10027 . + 2 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 10230 10430 . + . ID=g675.t1.exon9;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 10230 10430 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 10627 10712 . + . ID=g675.t1.exon10;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 10627 10712 . + 0 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 10899 10989 . + . ID=g675.t1.exon11;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 10899 10989 . + 1 ID=cds.g675.t1;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 11147 11257 . + . ID=g675.t1.exon12;Parent=g675.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 11147 11257 . + 0 ID=cds.g675.t1;Parent=g675.t1 #PROT g675.t1 g675 MCKGELKKQLTWEELAKHNKRNDALVAVRGKIYNVTEFMKRHPGGEDVLLTSAGRDVTQASASVMSRVFCTPSFSLIATDRNSDSHFIAQVFEMYHPFSTAKVLKKYEVGDLLTQELPVFPEPSPFFVAIKQRVEDYFVQTKQDPKFAPAMFFRYFFIVIAIALSWYAQLFVLQDSHIGLSIVAAAVLGFASALVGMLPMHDASHFTVTHRPWVWKAVGSLHDFFNGASYLVWCYQHFLGHHPYTNIDGADPDIVTADNDVRRIKSSQRWYSFYWNQHIYVPMLYTLLAIKTRLQDISILFVLKRNGAIRVNDVTNYHKTIFWAGKIFWVMYRIVFPFALLPFWKAALLFVVSDAVASLWLSLTFQANHVVGEVEWPTPDANNAIKYDWAEMQVLTSQDYAHDSWFFNLFTGALNHQTTHHLFPGISQYYYPQISPIVMQTCKEFGVRHNYKATFTEALGCHLGYLKRMGRQSQDSVGTTEQLSAKNE* # ORIGINAL: g677.t1 original gene structure, not modified by PASA NODE_752_length_18123_cov_39.597 AUGUSTUS gene 15758 17941 . - . ID=g677;Name=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS mRNA 15758 17941 . - . ID=g677.t1;Parent=g677;Name=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 17786 17941 . - . ID=g677.t1.exon1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 17786 17941 . - 0 ID=cds.g677.t1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 17341 17433 . - . ID=g677.t1.exon2;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 17341 17433 . - 0 ID=cds.g677.t1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 17000 17143 . - . ID=g677.t1.exon3;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 17000 17143 . - 0 ID=cds.g677.t1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 16476 16619 . - . ID=g677.t1.exon4;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 16476 16619 . - 0 ID=cds.g677.t1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 16021 16164 . - . ID=g677.t1.exon5;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 16021 16164 . - 0 ID=cds.g677.t1;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS exon 15758 15850 . - . ID=g677.t1.exon6;Parent=g677.t1 NODE_752_length_18123_cov_39.597 AUGUSTUS CDS 15758 15850 . - 0 ID=cds.g677.t1;Parent=g677.t1 #PROT g677.t1 g677 MSSKYEVRNDTSVIRNYGSLLVEVASCVPDGVVCFFTSYTYMESIVAQWHEQGILAHVLKHKLLFIETQDAAETSLALENYQKACENGRGAVLFSVARGKVSEGIDFDHEYGRAVIMFGIPYVYTESRILRARLEYLRDQFQIREGDFLTFDAMRHAAQCVGRAIRGKTDYGIMIFADKRFARQDKRGKLPKWIQQHLSEQYCNLSVNECVQHAKRFLRQMAQPFRKEDQLGLSLLTIEQVEARERQKDAEPTDMEM* # PASA_UPDATE: g676.t1, single gene model update, valid-1, status:[pasa:asmbl_9200,status:3], valid-1 NODE_752_length_18123_cov_39.597 . gene 11841 14806 . + . ID=g676;Name=g676.t1 NODE_752_length_18123_cov_39.597 . mRNA 11841 14806 . + . ID=g676.t1;Parent=g676;Name=g676.t1 NODE_752_length_18123_cov_39.597 . five_prime_UTR 11841 11923 . + . ID=g676.t1.utr5p1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 11841 12085 . + . ID=g676.t1.exon1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 11924 12085 . + 0 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 12265 12339 . + . ID=g676.t1.exon2;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 12265 12339 . + 0 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 12480 12616 . + . ID=g676.t1.exon3;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 12480 12616 . + 0 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 12789 12850 . + . ID=g676.t1.exon4;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 12789 12850 . + 1 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 13080 13227 . + . ID=g676.t1.exon5;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 13080 13227 . + 2 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 13532 13760 . + . ID=g676.t1.exon6;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 13532 13760 . + 1 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 13885 14008 . + . ID=g676.t1.exon7;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 13885 14008 . + 0 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . exon 14193 14806 . + . ID=g676.t1.exon8;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . CDS 14193 14422 . + 2 ID=cds.g676.t1;Parent=g676.t1 NODE_752_length_18123_cov_39.597 . three_prime_UTR 14423 14806 . + . ID=g676.t1.utr3p1;Parent=g676.t1 #PROT g676.t1 g676 MDQAMADQNDEYDSFSAGNPLPLETDTAAPWLPVEVQAYLLRFTDARTLAVCAQVCHAWKQFASELTRRHEWRCQISSGDTLERAVDAACDRILCTPFNPRFVMFFVMDNSKVDASDAWRRIRSRFPKSTHVIGCTGRGIIGMEEKPDTKGRPTRRPLEIESSKLPTISVTAAQLPPNISCSSFHLFDKDTQEQRLRSISEIPRDARLVVMLFGTSFRTDKAVIIDQRFPGAVKLGGLASSRAVKRELLFQNDSSVPGTGLVGLALGGAIKFNTDTVSDEDVSESLRGMAQWHQCPCRAKRGTWVGDVDVSADALPLPPCKSVAGMLFTCVGRGEAMHGVSNAEASLFARECPSVPLTGFFTGGELHSDYVGTTHVHGFTSVYCLVHE* # PASA_UPDATE: g11221.t1, single gene model update, valid-1, status:[pasa:asmbl_4528,status:12],[pasa:asmbl_4529,status:12],[pasa:asmbl_4531,status:12], valid-1 NODE_2545_length_5948_cov_30.3942 . gene 2 5674 . + . ID=g11221;Name=g11221.t1 NODE_2545_length_5948_cov_30.3942 . mRNA 2 5674 . + . ID=g11221.t1;Parent=g11221;Name=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 2 122 . + . ID=g11221.t1.exon1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 2 122 . + 0 ID=cds.g11221.t1;Parent=g11221.t1;5_prime_partial=true NODE_2545_length_5948_cov_30.3942 . exon 353 1401 . + . ID=g11221.t1.exon2;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 353 1401 . + 2 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 1605 1715 . + . ID=g11221.t1.exon3;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 1605 1715 . + 0 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 1813 1932 . + . ID=g11221.t1.exon4;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 1813 1932 . + 0 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 2138 2841 . + . ID=g11221.t1.exon5;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 2138 2841 . + 0 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 3071 4449 . + . ID=g11221.t1.exon6;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 3071 4449 . + 1 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 4681 4814 . + . ID=g11221.t1.exon7;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 4681 4814 . + 2 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 4970 5124 . + . ID=g11221.t1.exon8;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 4970 5124 . + 0 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 5236 5338 . + . ID=g11221.t1.exon9;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 5236 5338 . + 1 ID=cds.g11221.t1;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . exon 5519 5674 . + . ID=g11221.t1.exon10;Parent=g11221.t1 NODE_2545_length_5948_cov_30.3942 . CDS 5519 5674 . + 0 ID=cds.g11221.t1;Parent=g11221.t1 #PROT g11221.t1 g11221 SSAYFGNYSVTVTGGNIAGRPGGAIRIGRCEALVADSMFERVSTNSHGGCIATAAGTNFTVLRTTFTSCYSLSSSARNGGSIFVSSSNRVVIDSSTFYDSYSQAGFGGSIYVNGAISSVVISNTSFSLSESYNPGGAVFVQSSPRVDITNCSFASNVGYVGGSVYISGVLATTITGSTFAQSASTDDGDGGSIYVTGANSSVVITTTSFTDSSSPGGRGGSIFVTGASSSVVITKSAFLRSRSFDFGGALYVQSSRRADISDCSFVANEGSAGGSLVFIEVLATTVSSSTFTNGYGVSMAGAVYCEASAAPSKFTMTGCNATGNYVKFDRRNDEYGVAGALTLSGTNLTAEVTGSIFDQNMSLEDSDGGVVLVEGSVVARFSQCTFRNSTGYYGSVFLVRESTVTVCDQCTFTLNNGIFGSVYCDDRAQFGVINSIFDTNNGRTSAGIYATSKTVVQANDTSFHGNTATRGSAIAFDDARVVVVLRNASFSQNTATETGGAIYASLTGKQPVPCLSIDGATSNGDSAPQGGFLWVSNAISVDDRDVKVLPAPVESKPSVLLNNVNVVGAHATEGGAMHLLNTVVTIITNSRFTNCTADNGGTGHMSGSPITVLSNTIVEGSRASTGGAFVVTENGVLLVRTGSSFVRSVASGGGGGVSLQLDAVLNMTDSVAGGNGAVFGGFLALSGRSKSFIQNSNILYNRADDYAGAVAMSSASQLTVSNVSFTGNCASGQGGAFRVEGSATLIAQHGDPNVTAAVFSLNGADEGGALYVRNGASVSMTSVRFESNRAALAGGAVFAADCSTVDLAGVHLVKNGAFDGGQGGAILFQDSSSVRLTNSTLAENTARDGGAVYGRIVTSQTSVCGSTNSTEWGGVDAALEASRGYTCKGLIPTLTSVTSIFSSNVAEEDGGAIAMTGGRLRLTADTLIDSNTATSGRGGGLYYELPNANATGDVILNQVAISKNVAGSTGGGAHVFNSGSFVFSNVNVTENSADVGGGIFNANPASLVKNDTLRITGNTAASYGKDETSPGTTLKVRDVASLDDLPTGGTLPSFALELYDAYDVLAKSGGSNYEIKAELKAVTAPTVRPQDPALELRGSEARNLDGGKATFVGMRLFGSPGSYNLTFSVTNSPGVSITLPVTLVACESLGDYVIYQGSCVQEFSPNYGLRYALVALCALGEVLAIIVFIFIYLYRDHDIIKASSPLFCSIIVAGCMVGYATVFTMEPIATDATCGLNIWFGHLAFTITFSALFAKNFRIMAIFNNRKMRQRLRATSDMFLLSIVAVVCSIVVAYLIIWSAVDLPQKTMKFDEAKNTLRFTCESRSSLWAIILYAAEVRQSRDI* # PASA_UPDATE: g11631.t1, single gene model update, valid-1, status:[pasa:asmbl_5282,status:12], valid-1 NODE_2945_length_4666_cov_70.9728 . gene 87 4104 . - . ID=g11631;Name=g11631.t1 NODE_2945_length_4666_cov_70.9728 . mRNA 87 4104 . - . ID=g11631.t1;Parent=g11631;Name=g11631.t1 NODE_2945_length_4666_cov_70.9728 . five_prime_UTR 4059 4104 . - . ID=g11631.t1.utr5p1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . five_prime_UTR 3922 3946 . - . ID=g11631.t1.utr5p2;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 4059 4104 . - . ID=g11631.t1.exon1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 3781 3946 . - . ID=g11631.t1.exon2;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 3781 3921 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 3296 3466 . - . ID=g11631.t1.exon3;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 3296 3466 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 2841 2933 . - . ID=g11631.t1.exon4;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 2841 2933 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 2405 2449 . - . ID=g11631.t1.exon5;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 2405 2449 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 1645 1881 . - . ID=g11631.t1.exon6;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 1645 1881 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 1256 1360 . - . ID=g11631.t1.exon7;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 1256 1360 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 850 919 . - . ID=g11631.t1.exon8;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 850 919 . - 0 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 499 521 . - . ID=g11631.t1.exon9;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 499 521 . - 2 ID=cds.g11631.t1;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . exon 87 248 . - . ID=g11631.t1.exon10;Parent=g11631.t1 NODE_2945_length_4666_cov_70.9728 . CDS 87 248 . - 0 ID=cds.g11631.t1;Parent=g11631.t1;3_prime_partial=true #PROT g11631.t1 g11631 MDDAVIKWIRSLNFELVTAANASADVPLSELLRNGVVLCDLVNSLVPNSIVKVHTSSLLNVPSRKFLCVANINKFLDVCRSEFKLGEDELFLAEDLNNGVNIDKAVQTLCVLSKKAKEKGLNVAVIEAPVKAQAPKEPPPKMTREQFREKVVQEVNGTEQGYIKDLMFLLQGFARPLKQQKFLSADDHNKLFGNIQQIFDFQKHFYKRLNDTATKPSHDQRIGRVFIDATQEFKVYTMYCANHPNAVSAVMKLDTRPEWKAYGEVWTQQNGKFFDISSWLIKPIQRICKYPLLLRELIKYTDEVHPDYGDLRKAMEAMEGVTAYINEMKRKIENLQLMIDLQRRIEGWK # PASA_UPDATE: g8049.t1, single gene model update, valid-1, status:[pasa:asmbl_4115,status:12], valid-1 NODE_2352_length_6611_cov_60.8999 . gene 1 2047 . - . ID=g8049;Name=g8049.t1 NODE_2352_length_6611_cov_60.8999 . mRNA 1 2047 . - . ID=g8049.t1;Parent=g8049;Name=g8049.t1 NODE_2352_length_6611_cov_60.8999 . five_prime_UTR 2046 2047 . - . ID=g8049.t1.utr5p1;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . exon 1524 2047 . - . ID=g8049.t1.exon1;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . CDS 1524 2045 . - 0 ID=cds.g8049.t1;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . exon 1028 1381 . - . ID=g8049.t1.exon2;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . CDS 1028 1381 . - 0 ID=cds.g8049.t1;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . exon 1 916 . - . ID=g8049.t1.exon3;Parent=g8049.t1 NODE_2352_length_6611_cov_60.8999 . CDS 1 916 . - 0 ID=cds.g8049.t1;Parent=g8049.t1;3_prime_partial=true #PROT g8049.t1 g8049 MRKGKETRRKRRNDDAHSPTPGSVAISPVPGSSKTTKAAVETTVSIAPAIGGPSAQDAPSAPCVSWADLVVHEHLDAIHVNKFIDGLPVLSVEASLPILQPKDFMGAFPMRALLRAQTITLWNEIVAAFDKCVQTGLLTPYCMCLSAPSGMGKSFIAYVFAALARAHGWLVEYVGKADYIVNDGGAAKYLEMVVALNEKLLGEVLVTSGAVVGGVNYMDKPILDLARAGIVDDTLADAALTRLLNELQKWRKTPHIRIIDEHNTFWSAGDEDVRSWTPRWKQLFASFEALSGMRTFLVYSGSQHSQFEDRIPSGLHQCLRYIQPYSDDEFRVMQGLSTYPASLRAIEDEVAERTGLVPRELALLVETVSSLCAPSSDVSVSDCVRDWWDKSITLKRERHAKYLASLSDKEARKFFNAVRQMLFAAVDNPYFSGAYRDRGLVFRRESSANQPSSVRPVHEMARLVLLESLFSCGVPDDDILRMFRDPLSEGTGGVCFEELVVRWFLFLGKGGARTLEYVNQRGENGGELIIPAMRDYIPLPRRMFVPRRQRWENRAIRFPPDFPRFDLLFDTSDCTVFIQVSIQTVSGHDRDTKELHL # PASA_UPDATE: g8050.t1, single gene model update, valid-1, status:[pasa:asmbl_4114,status:3], valid-1 NODE_2352_length_6611_cov_60.8999 . gene 2679 5404 . + . ID=g8050;Name=g8050.t1 NODE_2352_length_6611_cov_60.8999 . mRNA 2679 5404 . + . ID=g8050.t1;Parent=g8050;Name=g8050.t1 NODE_2352_length_6611_cov_60.8999 . five_prime_UTR 2679 3070 . + . ID=g8050.t1.utr5p1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . five_prime_UTR 3291 3319 . + . ID=g8050.t1.utr5p2;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 2679 3070 . + . ID=g8050.t1.exon1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 3291 3378 . + . ID=g8050.t1.exon2;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 3320 3378 . + 0 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 3472 3655 . + . ID=g8050.t1.exon3;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 3472 3655 . + 1 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 3770 3928 . + . ID=g8050.t1.exon4;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 3770 3928 . + 0 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 4047 4190 . + . ID=g8050.t1.exon5;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 4047 4190 . + 0 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 4318 4489 . + . ID=g8050.t1.exon6;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 4318 4489 . + 0 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 4603 4781 . + . ID=g8050.t1.exon7;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 4603 4781 . + 2 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 4938 5035 . + . ID=g8050.t1.exon8;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 4938 5035 . + 0 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . exon 5160 5404 . + . ID=g8050.t1.exon9;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . CDS 5160 5163 . + 1 ID=cds.g8050.t1;Parent=g8050.t1 NODE_2352_length_6611_cov_60.8999 . three_prime_UTR 5164 5404 . + . ID=g8050.t1.utr3p1;Parent=g8050.t1 #PROT g8050.t1 g8050 MGAATSQKHLAEKTRKEHTLYIKRYILFSELARRSPSDMTESLPRHIRAFLQDICNGGTHSRLPGMAGSRRGKQANNTSRTPATSRNARAAVSYYFKQRGANGKWTHQGGAVYTGNPTLSDVIREFMSGFKKDRIKAGWTEKQKRAIMRSHMMRLGEYNLAKLNEARDCGDQGAVKRILQAQAKYVLAFKLLLCVSEVQRLRTGMFTWNCSIQIRDEGLSTEGTVHDTVQLPWLKTHQEGKCGKIPLYSEHKKDWQVCPHAWLSMYLKEVMPEVTRDSDVLLFPELDEDGDIRMPPREMSYERFKHQFHSDLVGAGVCTKEEAKAFGTHCFR* # PASA_UPDATE: g645.t1, single gene model update, valid-1, status:[pasa:asmbl_8744,status:12], valid-1 NODE_6630_length_533_cov_48.7052 . gene 2 533 . + . ID=g645;Name=g645.t1 NODE_6630_length_533_cov_48.7052 . mRNA 2 533 . + . ID=g645.t1;Parent=g645;Name=g645.t1 NODE_6630_length_533_cov_48.7052 . exon 2 533 . + . ID=g645.t1.exon1;Parent=g645.t1 NODE_6630_length_533_cov_48.7052 . CDS 2 533 . + 0 ID=cds.g645.t1;Parent=g645.t1;5_prime_partial=true;3_prime_partial=true #PROT g645.t1 g645 FGFTSKGELDEGMVRVFVRAARASNFTIKVFIDAGMATEALEKWRRRREKEVEKGEKRMPHGLSTILGDAFRAQKIEVCYSLDADNDDTIAAHAHADGADILSGDTDFFRYIGVQYRVYKDFELKRIGDGPKELVLIPHTRCDTRADKLQVRQPPPAYTNDPHTASFVPILVRDRLY # ORIGINAL: g2868.t1 original gene structure, not modified by PASA NODE_7764_length_409_cov_92.7365_potentialcontaminant AUGUSTUS gene 1 409 . - . ID=g2868;Name=g2868.t1 NODE_7764_length_409_cov_92.7365_potentialcontaminant AUGUSTUS mRNA 1 409 . - . ID=g2868.t1;Parent=g2868;Name=g2868.t1 NODE_7764_length_409_cov_92.7365_potentialcontaminant AUGUSTUS exon 1 409 . - . ID=g2868.t1.exon1;Parent=g2868.t1 NODE_7764_length_409_cov_92.7365_potentialcontaminant AUGUSTUS CDS 1 409 . - 0 ID=cds.g2868.t1;Parent=g2868.t1 #PROT g2868.t1 g2868 GATGSHVLSIFHRVRYGDTQGLADIGTFWDAYADFVAGGATGNSGGVRETSEAAISIDDIISTGVLLSSGTFSSIFQCKSAPKGNSRADIVARVLSTIQYMGRESRVRAAKRLAAVTRTPRLFRTFVCTWWLEALR # PASA_UPDATE: g8561.t1, single gene model update, valid-1, status:[pasa:asmbl_623,status:3], valid-1 NODE_1168_length_13403_cov_42.6109 . gene 8432 10381 . - . ID=g8561;Name=g8561.t1 NODE_1168_length_13403_cov_42.6109 . mRNA 8432 10381 . - . ID=g8561.t1;Parent=g8561;Name=g8561.t1 NODE_1168_length_13403_cov_42.6109 . five_prime_UTR 10362 10381 . - . ID=g8561.t1.utr5p1;Parent=g8561.t1 NODE_1168_length_13403_cov_42.6109 . exon 9597 10381 . - . ID=g8561.t1.exon1;Parent=g8561.t1 NODE_1168_length_13403_cov_42.6109 . CDS 9597 10361 . - 0 ID=cds.g8561.t1;Parent=g8561.t1 NODE_1168_length_13403_cov_42.6109 . exon 8432 9482 . - . ID=g8561.t1.exon2;Parent=g8561.t1 NODE_1168_length_13403_cov_42.6109 . CDS 8619 9482 . - 0 ID=cds.g8561.t1;Parent=g8561.t1 NODE_1168_length_13403_cov_42.6109 . three_prime_UTR 8432 8618 . - . ID=g8561.t1.utr3p1;Parent=g8561.t1 #PROT g8561.t1 g8561 MDASLAEIESARTGSRRELRLSGRDDQLAHRVAQLRRLPPSLGSLPLLTCLDISFLPTLNALPEEIGALAALRDLTVTHNAALAGLPHCIGSLRELRTLIASNNAIAALPPSLCILAKLQVLNVSANKLSALPENIGDLTELVTLDISGNQIIAFPESTWFLSRLATLDASRNDFESISAGIGGLSQLKSLSLRGCRRLRSLPGELSDCARLKDAAFDGCTAIEDRKLLRLVESSGANGTKQVLQHLRGGKSKRQVKDAEHEHEEKEAAAAISQGKPVLRVEATSAQTSHNSRSITVITTDSVKKVRPHIVCCILSGLDLRGELEHGGMENNEAAASDVDKARQDGQPGSRFRRFISLQTALHDRECDRRNLAAVGTHDLSRIAGDSVHYVAEAPGDIRLLPLKADAELTASDFVLRAAAADDPFGIGRHLHLLEGLGSYPVLRDSAGVICFPPIVNSHRTRVDEDTTDVFLEVSSRKDLVTCRRVMDALVTEIVTSVGRRVGEPAVVLRQVRVVDAAGNLRVAYPSKQDLVGRELKVEWAR* # PASA_UPDATE: g8560.t1, single gene model update, valid-1, status:[pasa:asmbl_625,status:3], valid-1 NODE_1168_length_13403_cov_42.6109 . gene 7481 8421 . + . ID=g8560;Name=g8560.t1 NODE_1168_length_13403_cov_42.6109 . mRNA 7481 8421 . + . ID=g8560.t1;Parent=g8560;Name=g8560.t1 NODE_1168_length_13403_cov_42.6109 . five_prime_UTR 7481 7561 . + . ID=g8560.t1.utr5p1;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . exon 7481 7723 . + . ID=g8560.t1.exon1;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . CDS 7562 7723 . + 0 ID=cds.g8560.t1;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . exon 7943 8071 . + . ID=g8560.t1.exon2;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . CDS 7943 8071 . + 0 ID=cds.g8560.t1;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . exon 8289 8421 . + . ID=g8560.t1.exon3;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . CDS 8289 8393 . + 0 ID=cds.g8560.t1;Parent=g8560.t1 NODE_1168_length_13403_cov_42.6109 . three_prime_UTR 8394 8421 . + . ID=g8560.t1.utr3p1;Parent=g8560.t1 #PROT g8560.t1 g8560 MSLRMGVIAAVLCLAACASLSAAETCSSKAMKHNLYNCAFVSVDANRDKKLGLNEMNAAIEKHANMIEAVAISMFKSKIDESFHWCDKSKDFALSLEELLDSSCFSFVPCDVWRKVEERLCPRRKLERSEL* # PASA_UPDATE: g8559.t1, single gene model update, valid-1, status:[pasa:asmbl_624,status:3], valid-1 NODE_1168_length_13403_cov_42.6109 . gene 6571 7165 . + . ID=g8559;Name=g8559.t1 NODE_1168_length_13403_cov_42.6109 . mRNA 6571 7165 . + . ID=g8559.t1;Parent=g8559;Name=g8559.t1 NODE_1168_length_13403_cov_42.6109 . five_prime_UTR 6571 6648 . + . ID=g8559.t1.utr5p1;Parent=g8559.t1 NODE_1168_length_13403_cov_42.6109 . exon 6571 6819 . + . ID=g8559.t1.exon1;Parent=g8559.t1 NODE_1168_length_13403_cov_42.6109 . CDS 6649 6819 . + 0 ID=cds.g8559.t1;Parent=g8559.t1 NODE_1168_length_13403_cov_42.6109 . exon 6924 7165 . + . ID=g8559.t1.exon2;Parent=g8559.t1 NODE_1168_length_13403_cov_42.6109 . CDS 6924 7130 . + 0 ID=cds.g8559.t1;Parent=g8559.t1 NODE_1168_length_13403_cov_42.6109 . three_prime_UTR 7131 7165 . + . ID=g8559.t1.utr3p1;Parent=g8559.t1 #PROT g8559.t1 g8559 MTPHVRAVRRLYREVLTVHRSLPPEFRSLGNTYARDEFRRHKDAKAEFVGPFMREWTHYVDMVTRQLSVAAASSSAGKGAVVVGAPLDADRAKMLSDEQVGQLYELRTEIRRPTEENASGSPATK* # ORIGINAL: g8558.t1 original gene structure, not modified by PASA NODE_1168_length_13403_cov_42.6109 AUGUSTUS gene 114 6111 . - . ID=g8558;Name=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS mRNA 114 6111 . - . ID=g8558.t1;Parent=g8558;Name=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 5870 6111 . - . ID=g8558.t1.exon1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 5870 6111 . - 0 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 5005 5783 . - . ID=g8558.t1.exon2;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 5005 5783 . - 1 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 3359 4872 . - . ID=g8558.t1.exon3;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 3359 4872 . - 2 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 2124 3192 . - . ID=g8558.t1.exon4;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 2124 3192 . - 0 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 1775 1908 . - . ID=g8558.t1.exon5;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 1775 1908 . - 2 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 1500 1654 . - . ID=g8558.t1.exon6;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 1500 1654 . - 0 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 1220 1316 . - . ID=g8558.t1.exon7;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 1220 1316 . - 1 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 965 1096 . - . ID=g8558.t1.exon8;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 965 1096 . - 0 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 599 693 . - . ID=g8558.t1.exon9;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 599 693 . - 0 ID=cds.g8558.t1;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 114 289 . - . ID=g8558.t1.exon10;Parent=g8558.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 114 289 . - 1 ID=cds.g8558.t1;Parent=g8558.t1 #PROT g8558.t1 g8558 MLCTRATVLALAAAVCLVASAPVAFAGVSSSNDCPDYLFGGWTLRLINGVPVLPKRMHVGCEEITFLTLSSTSRTRSVKESWSFICGPSATVQNAYEISMSFTDEDGYDSYLWALVRHGEENFVDGADGAMRTVETMTVVRGNVSATAAGARKSKPTSLLPERGLSVAVYRRAGAQAANLTRVQFALCEGQSVIELAPGRYTDLELEIPYGVRILSADSPSGDNSGRAVFDCRWDNSTEASMSIAKILTTRMVTVSGFLATNCGHGFVAEDASSSIDFALRDFEAVNNKFALQGSLVEVWSRGWLSMTDCLVSGNTADKGPALLAMGEGLASSIVGCNFTGNTAHFSGGAIYVQWGTLDIDRCLFDNNEADSGGAVAATISKVTMYNSTVRNSRGGNDGGGAVRIDATSGIGAPASLDMVDCVMDNLTSLEGGGAVRVGTGSRFMARRTAFRNCRAYAGGAVYVDEMGSVRIFASTFDGCVANTAGGAIGALEFAVVTLVDTIFTGCVAQGDGGAFYAQVASLEGFTITSCAFNGNVATKYGGGAYISAPETPSMIPIASLVLVNSSIAGNAAIQGGGIFVSGSSGVAATDVVCVGNTATLGGCIFAESGAYIVLNGSSMMTDNTAVSGGCAYLTDFAQLNATRSLWVRNSADEGGVVLAMVNAALSMDNCEISQNLAFENGGAILATHSATVSLSRVMARNNNAGSYGGFISVHSRAGVTATNTTVAHCHAGMSGGAWFGTRVSSAALTACTFTDNVAEDYGGSFLFRGGATARLVSVRVAASSAGLGGGGICAMNNAVVTLSSTNLTRCESLEGDGGGVLATHAATLALDGCAVSANGAYEGGGISATFSDALNGTRLLLRISSSVFESNTATRNGGALSLAGYAAMSLSASLFRRNYAGGSGGAIEVAVAGFDGASFVADGVTFTSNAAVALGGALYVGVRPGASAVEFARNTTVVAVRSSSFVGNMASMGAAVYTEDPRGAAIVFSPQLMANNTATLVGEAVIASPPARVVWDPSSFGGSAGPGASLSVRSGNSLGGAVAFVVDASGIRTGTFGQSIVLDLDAYTPVNKSGVYGWVRAAPVVGGVHAGVAAVMDAAQAADTASQTMSDVRVYGPPGLYRLYARVATAASGGSRSGSGSGGGSLLSAGRGGVLKMGGGSAQLSIADPTIDAAYVTVTIEPCIGEYALQSNGAYDECYTEFNLNEALRYAMGAMCALGELVVIATSIFIFAHRRHKIVMAASPNFCGIVLFGCALAYGVVFALIPEATEPLCVVHVWMGHIAFAVTYAALFSKTYRIMLIFNNRKLKKKIMSEQFMLSLVAGIVGVCIAYLVVWTAVDRPQVDTLWGSPGNPIRYTCASHSKWWAIVLYSLEGMILLWGVYLAWMTRHAPSKFRESKYIAASIWTIFVVAAIILPLNYAVDVGNPDTQFLFVSIGIFIATTGTLLIIFGPKVYGVYTWGTAN # ORIGINAL: g8562.t1 original gene structure, not modified by PASA NODE_1168_length_13403_cov_42.6109 AUGUSTUS gene 10910 13310 . + . ID=g8562;Name=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS mRNA 10910 13310 . + . ID=g8562.t1;Parent=g8562;Name=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 10910 10936 . + . ID=g8562.t1.exon1;Parent=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 10910 10936 . + 0 ID=cds.g8562.t1;Parent=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 11166 12596 . + . ID=g8562.t1.exon2;Parent=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 11166 12596 . + 0 ID=cds.g8562.t1;Parent=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS exon 12795 13310 . + . ID=g8562.t1.exon3;Parent=g8562.t1 NODE_1168_length_13403_cov_42.6109 AUGUSTUS CDS 12795 13310 . + 0 ID=cds.g8562.t1;Parent=g8562.t1 #PROT g8562.t1 g8562 MQAPVSEEKKHSPHVDAPRPDMLTRPAPTCRLSFISSAESASASTASPASAPTPSPRSSVFSFISGNVTQDGLSNVTTTSGSTKMKALDASVSGGYANGVAEDDTLAAASAANPAKGIHFFGLPSGVAVVKKKVKSKRLVRPGHDRDDSETDGLCGGALTQDDPAHTIADDANNDCPSQVPRAHVTDYERLDTLLSPGSRPGGSGPDQSSAAPEVGAPSRHTALAESPGLSGSPLPAPGERGDGDGVNNSISASRGASSLASSAGSLLEPNVPAAIARTSDKGECETLQEPPGDECTTGCPRDSFGEALGLRDAGIAGGRGVCAKPAPDVAVVIPFALSENTRKEHFDNSPTTTLRFGGDVGAAVSNDGLESLVAAADGRVVLTARAREVAARGAQTVASGVLARERRLAELFLTLGECRREQDECVAREDYDKADALASQLRDVQEEIVSSFGSLSESSVAVGDELRAAVEAEARAAEIELDAIKERTRLLESLRRERAASLDALQRRASIRLAERKKRITADKERVARELAHHELDLSHAVSSLQRMRAEVDEGTAVQKSELSRLERERSRVAAEIDALMIRLDALRSAQRAIDASIAKERSSMDEVSRSFGGEHARLEAEKLRLSTLRDSCAKKLDALGAEVSAGTFHWPVVAF* # PASA_UPDATE: g9170.t1, single gene model update, valid-1, status:[pasa:asmbl_909,status:12], valid-1 NODE_1237_length_12827_cov_43.3501 . gene 6609 10317 . + . ID=g9170;Name=g9170.t1 NODE_1237_length_12827_cov_43.3501 . mRNA 6609 10317 . + . ID=g9170.t1;Parent=g9170;Name=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 6609 6761 . + . ID=g9170.t1.exon1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 6609 6761 . + 0 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 6928 7148 . + . ID=g9170.t1.exon2;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 6928 7148 . + 0 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 7528 7631 . + . ID=g9170.t1.exon3;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 7528 7631 . + 1 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 7872 8823 . + . ID=g9170.t1.exon4;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 7872 8823 . + 2 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 9111 9190 . + . ID=g9170.t1.exon5;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 9111 9190 . + 1 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 9303 9722 . + . ID=g9170.t1.exon6;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 9303 9722 . + 2 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . exon 9961 10317 . + . ID=g9170.t1.exon7;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . CDS 9961 10016 . + 2 ID=cds.g9170.t1;Parent=g9170.t1 NODE_1237_length_12827_cov_43.3501 . three_prime_UTR 10017 10317 . + . ID=g9170.t1.utr3p1;Parent=g9170.t1 #PROT g9170.t1 g9170 MKVSAIEIVWHAKEPVFSVDAHPSGRIATGGADNDVKIWMLVSSGDGLVPKVEFLANLSRHSKAVNVVRFSPNGCVLASGGDDGAVILWKRSEELSAASGQSQQPSLFAETDDSKEVWTVLHILRSHLEDVYDLSWAPDSFSLISGSVDNSAVVWDATKGKLKNQMKDHKHYVQGVAWDPLNQFVITQSSDRSVRVYAVAAQEGARSKKPFTLVATNGVSLQRGLRKRRESTAAHQPSSEADATAAVGDDTSAKSGGAGDTLAKNGGAQASESAQMSSKQQHELGCNGRYYADESLPSFFRRPAFTPDGSILITPAGIWAKVDAQGNVQSAALQQRSTDATMADVSEDAAGNGNGGNDGDATEENEGANRGPRVERIFTTIVYNRGTLHRPIAQLPSPKKPTVAVRCCPLLFKSAVTPNAEPHAAASGRARRMVDVPYRMLFAVATTDSVLIYDTEKLEPVCIVADIHYATITDMCWTHDGKYLAVSSQDGYCSIVAFADGELGRPLPLEFYPPAMLAARESEKPAKKDAAADAKSDDKGVPVTPPNPRPHVAPIVPITIPDNAEPRDISSLVRRKPQAQSQSQSQSQSQPQSQSAPATQPSTVSVTPVAPSSVAEFNSMPVDATAGSDQCAVSQSSAVPQGEGHVAKKRRVVPTLVTSYE* # ORIGINAL: g9168.t1 original gene structure, not modified by PASA NODE_1237_length_12827_cov_43.3501 AUGUSTUS gene 70 778 . + . ID=g9168;Name=g9168.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS mRNA 70 778 . + . ID=g9168.t1;Parent=g9168;Name=g9168.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS exon 70 778 . + . ID=g9168.t1.exon1;Parent=g9168.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS CDS 70 778 . + 1 ID=cds.g9168.t1;Parent=g9168.t1 #PROT g9168.t1 g9168 PWNLHIPKIECGSLAYWLILTSSLPVLFGVTFLACRAKRGHPIHRVPPLDGESPAPARVLVTGILPGNKSARLSGSTSVWTASLEFKYVLLSLFAGVASGLTGLGGSTIKGPLLLRVLEEPRVSSATCAFMLLTTVSATIVQFGALGMIQPAPAGILFGIALVAAFVGQAIIRTVVRRTRRTSPIVFALALYMFLALFAMGSIEIVRTISAIQDGRKDLLGVRSLCDTNSTRLDW* # PASA_UPDATE: g9169.t1, single gene model update, valid-1, status:[pasa:asmbl_911,status:3], valid-1 NODE_1237_length_12827_cov_43.3501 . gene 997 4553 . - . ID=g9169;Name=g9169.t1 NODE_1237_length_12827_cov_43.3501 . mRNA 997 4553 . - . ID=g9169.t1;Parent=g9169;Name=g9169.t1 NODE_1237_length_12827_cov_43.3501 . five_prime_UTR 4249 4553 . - . ID=g9169.t1.utr5p1;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . exon 2938 4553 . - . ID=g9169.t1.exon1;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . CDS 2938 4248 . - 0 ID=cds.g9169.t1;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . exon 2621 2749 . - . ID=g9169.t1.exon2;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . CDS 2621 2749 . - 0 ID=cds.g9169.t1;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . exon 997 2168 . - . ID=g9169.t1.exon3;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . CDS 1434 2168 . - 0 ID=cds.g9169.t1;Parent=g9169.t1 NODE_1237_length_12827_cov_43.3501 . three_prime_UTR 997 1433 . - . ID=g9169.t1.utr3p1;Parent=g9169.t1 #PROT g9169.t1 g9169 MDACFDKMAIDYAGSERPATSCGADVANRADATSVIGEGCATVNRNVTGDAVRLVEVEPRAVCEVDNYELGLRHFHRWYDVKAAKVYFRKAVDCQKLENARLSVAYLYLYRISDGWLDSDSAAAASHLSLASRLGAFEACTKSAEETQDGGGDGIAEFNLGWCHQFGVGTPVDMDAAAHLYRRSAERGLPIAQCNFGACCFRGEGTAKNAHAASFWFDKAAKQGLPRAEIFSGLCYVHGKGERQHVHNAALWFHRAAEQGDATGQWLLGICFEQGIAAPVDFRRAFELFNLSALQGYAPAQYAVGCYYEVGRGIAPDSKAAVSWYNAAAKRGYYPAVRALASCYRHGVGVEISDFDTRMGIAATKYKEAAMGGDGDSMCLYGLMRARGETSGDGAAAASDAVEWFKKAHDAGCATATVNLSLCYKMGFGVEKSEEQAFSFMADAAKRDDQPDAYYELGALYSEGTGTEKSIHKAIEWYKKAIRSGHEKAQDALTVCEQMLGDSYPRELKVERADNAPDDDTDVSIQANFGGDDERGATTSDHVYVTEPAGNGADGVFPDSMLSDDVCPLSDADRESPRRLRGFPLEFRFRSDSDSDSDSSSSDGQTLEFIDIPFQFTSYEEKEIDLLDRMPHVELNPVLPIVMDPSVAVLRSNDDAAASGTLPPQTPVETPVAPKEKAVKSVFDPARAPLRSCMRKRTEARVSVPDATAVTASPDASVVPGVVC* # ORIGINAL: g9171.t1 original gene structure, not modified by PASA NODE_1237_length_12827_cov_43.3501 AUGUSTUS gene 11656 12827 . + . ID=g9171;Name=g9171.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS mRNA 11656 12827 . + . ID=g9171.t1;Parent=g9171;Name=g9171.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS exon 11656 12827 . + . ID=g9171.t1.exon1;Parent=g9171.t1 NODE_1237_length_12827_cov_43.3501 AUGUSTUS CDS 11656 12827 . + 0 ID=cds.g9171.t1;Parent=g9171.t1 #PROT g9171.t1 g9171 MDNLPDDILLSIFKIAYGHDVRARARAAAVCRRWHKLSLRDLSRFVIDASSDARKGRLVTRGNWSPLTPTHLSSVASRCHGVTSLTIKFGNLVEALPLVRAFLSYVGSPESINTLRLEWDGTDHSPTFDAKLSVPYPTRISTSLDEMGKARAVASVDERTRASLAASANRLKTEKGGVDSKEVKWLGAITEIAFLLPSLSSVSVFGAYASNTLSSTAAGATSVAADLSWVASHCLGRTPDCFLEVVAALHPNIEEVELVNLDCDRMGRILEGVLYIDGLASNSSPSDLDSKAVYSGDVPRPLLSNLRALRLCGPSFVGSTDGRLLNDTLRRIGHHFRNLAWLRLENLIGEDPNAFPPQTDEMRQQYQQQQQQQQQQQQQQQQQQQQQQQQ # PASA_UPDATE: g7361.t1, single gene model update, valid-1, status:[pasa:asmbl_4368,status:12], valid-1 NODE_2462_length_6181_cov_39.7797 . gene 144 5826 . - . ID=g7361;Name=g7361.t1 NODE_2462_length_6181_cov_39.7797 . mRNA 144 5826 . - . ID=g7361.t1;Parent=g7361;Name=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 5626 5826 . - . ID=g7361.t1.exon1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 5626 5826 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 4965 5454 . - . ID=g7361.t1.exon2;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 4965 5454 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 4704 4789 . - . ID=g7361.t1.exon3;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 4704 4789 . - 2 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 4135 4338 . - . ID=g7361.t1.exon4;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 4135 4338 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 3760 3906 . - . ID=g7361.t1.exon5;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 3760 3906 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 3487 3596 . - . ID=g7361.t1.exon6;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 3487 3596 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 3245 3274 . - . ID=g7361.t1.exon7;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 3245 3274 . - 1 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 2775 3028 . - . ID=g7361.t1.exon8;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 2775 3028 . - 1 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 2192 2401 . - . ID=g7361.t1.exon9;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 2192 2401 . - 2 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 1732 1886 . - . ID=g7361.t1.exon10;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 1732 1886 . - 2 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 1393 1572 . - . ID=g7361.t1.exon11;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 1393 1572 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 1151 1217 . - . ID=g7361.t1.exon12;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 1151 1217 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 800 963 . - . ID=g7361.t1.exon13;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 800 963 . - 2 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 554 645 . - . ID=g7361.t1.exon14;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 554 645 . - 0 ID=cds.g7361.t1;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . exon 144 241 . - . ID=g7361.t1.exon15;Parent=g7361.t1 NODE_2462_length_6181_cov_39.7797 . CDS 144 241 . - 1 ID=cds.g7361.t1;Parent=g7361.t1;3_prime_partial=true #PROT g7361.t1 g7361 MRIYCVGRNGDSLDKCANHDTFVTDAMALIKDTILNRPMPTYPKPNSGYCMSRFESLVQTPTETFTAWKNRLYTRDPLRPLVMNITGLRPYVRRPYESANSMQPPCAAMSTPPSVPVVTPTPVEKTQAGAFSDLLIVDCNMDVHVLPSHPILKTRLSMPALSRAWDFASAVIENRTKCHCPAAPDGFYGLNIPAILRQVQWSSSDASSPASCNGTRAFRDLSRYLKATFPESTCSAQRMAAGEPCTMQLSLHPTELSIQVALDQCPSNPTRTFVSVSCAGALCTDFLKPCTSDSNCAKGMHCIDAAQLISRQGRALDVAAGAGTVLQAIQLWLDENNGNNNCGIDCSGTSGSRALSILSTFLGTAYTPAATGIGLRMCGIDDQLVIGDETSRFTEFLLQYVGTKNLEALYDGVEGFPNTCGIFGPRYASASSSPLIRRCGNPGSCKCISAVVCALGGGSRYDCPGYLLGAYSAWRNGVLPTLFDGLFRTNRLGDQKEYLAALLNVEMSYTPPINYAYYGYYYATYSYQYPIKDSDGNLRLAAPGHVLMAWDGVMPNGDKATSDSRKSGTNYSPPAVTCTDEPSRLPLVHLSCGNTLSVLPTTPLKLTAWLPDAQRALVQVGAVLAKYFAGCRGESADAVYSRYMPWRPEMWLYLLSKSPFASRPTMLPDPLQKIAELLGLDVSTFSKFLSLPDTCTYESYKRTGECRLEFTGLQTLHSVFKNVTLRAIVRTCASTSPDALPEIQVECVGTGCRNILEVYNYKFCRQDTDCGLGKCQIIDDMADGLTGTVDPIARLLWAESTSLDKCASSQLFSRDFLRLVNVIAQSSYK # ORIGINAL: g8475.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 20883 29039 . + . ID=g8475;Name=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 20883 29039 . + . ID=g8475.t1;Parent=g8475;Name=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 20883 22326 . + . ID=g8475.t1.exon1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 20883 22326 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 22477 23841 . + . ID=g8475.t1.exon2;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 22477 23841 . + 2 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 24050 24189 . + . ID=g8475.t1.exon3;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 24050 24189 . + 2 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 24500 24637 . + . ID=g8475.t1.exon4;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 24500 24637 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 24917 25054 . + . ID=g8475.t1.exon5;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 24917 25054 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 25355 25470 . + . ID=g8475.t1.exon6;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 25355 25470 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 25891 26043 . + . ID=g8475.t1.exon7;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 25891 26043 . + 1 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 26248 26575 . + . ID=g8475.t1.exon8;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 26248 26575 . + 1 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 27098 27156 . + . ID=g8475.t1.exon9;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 27098 27156 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 27295 27534 . + . ID=g8475.t1.exon10;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 27295 27534 . + 1 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 28302 28469 . + . ID=g8475.t1.exon11;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 28302 28469 . + 1 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 28663 28810 . + . ID=g8475.t1.exon12;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 28663 28810 . + 1 ID=cds.g8475.t1;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 28998 29039 . + . ID=g8475.t1.exon13;Parent=g8475.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 28998 29039 . + 0 ID=cds.g8475.t1;Parent=g8475.t1 #PROT g8475.t1 g8475 MERPRARRAPSSAATGLLESEMVSSPGVFMHAPNAHHPAQPLQRSLHLHSQQINSFPIASRASIREPRTHIPVNFVAGNMGSPHHGQWGNGGQNAESHFEMSQSARGRADALLSASASNWSPTHLNTAGSVLPRHAFAATQAHAMRQCTGPCCALVMNPQSAPPPVPARRFVYHPYALPPASSRTQQGSRNAQRWQNGRALGQRTAFSAPASGAAGVEGVSFVHAPELRPLPWAHDVAHLTESAESAHAHAAVLSNHSPQTHSRARAAVPLAMPMPIRDGHHVVVPRLVQPHNMAAGVRLHDGGFVPAHEPDHYPQQMGMSLDAGAYGNLHQHQQQQQQQQQQQQQQHQQLYELQQQRHHHHQLQHQQLYQPQQQHYHHHQQQHQQLYQLQQQQQRIAIDLELQNGHNDTLRPSLSNGAHAGAPLVQLQQPRNDHLSRNDSAPLISPLSRQQLQHFMVTNVKPGVGDTTVVGRKRARKNKSGDTHATAVQCDAMPPVVDAAHDRALPNGRSVLAGTTTRPRTHPSATTAAVAPLLIHTPPAHDVHDGACSLPTPPHSATPAINRDGTLGRPRKKRRGDDPVMLTPTSTPTLTPPSTASLATDVVDAAVAGKKSSPGFLKSTKPRIPATVAMRLDFDSASSAIGKRNAVSANTVERERAQGVLSTRAFFPPSPGPVAVAVPPAGSEECPPASKIPLQSNENGGNVYRPVVGTPSAPAGSEDATDGTGGDLLALEDTTKSSILIDDVPTKETAPATTTDKPKKKEKKTKETKEMKKTKAKETKEKEKKDRDIPMGSQGEGQQADVEFDGTAPVTKAKARKSKKSRKAPKQATEKAIGKKLRNRNGQRNEKQNNSATESELESEGSESGEGKKTPGHRKKKGAKKARAPSASASATDSDDELDADGMGALLLARIALSPKNKGARISRERALKACCPVQTWDVDGADYTMKYKCEGCSSRMLHSRYFCRNCEAGDDGYDLCLKCLQTYFDDDDHKHPRESFSRAAVNSALFAKTMDAGIRLDQIVLDQFDENRTVEDEEDGYVRECALCRLDETEKPDGFADMPFVEPHPLVIATARKERRLYVHDACARYSPEVAVSAKGSWFNVSSAVARGSKIRCHTCEEMGATIGCLNISCHNSFHIPCTGKTLKFFENGCLFWCSKCERENYRNQSETFTCEGCGGTIASVRHYCTKCESKSYPWHSFDLCEQCFVTVPASMSTDDDTPGHVICDKVRHKHAREDFAVTTVLGVDETWRDVELEMEEARRRERQKARKKEPESLRAYEAGGVAAVDDLSLCRYITRASLQPFDADGFAANRILRSYGPPDVQSHNLAFDSSYFDIPGRAVRWATHGAADYCGTWIPHIPRWSVTMFTNEEDRVLTNFLGRGTDAIECFLLNRRVVGVDVNGLSIVISRKNCGFPIPPSLKLHLRTEHRPLLVNGDARHLVGEQFADASFDHVLSHPPYAGCIAYSSDIDEDLSRCPTCVTHGANCKCGMH* # ORIGINAL: g8472.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 8633 9966 . - . ID=g8472;Name=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 8633 9966 . - . ID=g8472.t1;Parent=g8472;Name=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 9885 9966 . - . ID=g8472.t1.exon1;Parent=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 9885 9966 . - 0 ID=cds.g8472.t1;Parent=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 9356 9685 . - . ID=g8472.t1.exon2;Parent=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 9356 9685 . - 2 ID=cds.g8472.t1;Parent=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 8633 8985 . - . ID=g8472.t1.exon3;Parent=g8472.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 8633 8985 . - 2 ID=cds.g8472.t1;Parent=g8472.t1 #PROT g8472.t1 g8472 MGTMTISTSVIPGILVLALLNQVICVEAQHNVTVISSETTRLVVTWTYEDSFNDTALVARVWAVPQGNASLATAGTLVAFDDRAPGVPYVVGVGVVEGLASGTPYGAVVRYCARGSPPGSTASCGAPSYSAATLLTKGPSTVQSVSVSTTGVVLTNTTIIVTWIAGVTGATPTNFTIECASELDFSAFLPCTSNVTGTERNATVTGLVQGWTYKFRVTACAGIRCAAPAQSSAVATTGELPGWAVSRCTVCVRD* # ORIGINAL: g8470.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 89 859 . - . ID=g8470;Name=g8470.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 89 859 . - . ID=g8470.t1;Parent=g8470;Name=g8470.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 652 859 . - . ID=g8470.t1.exon1;Parent=g8470.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 652 859 . - 0 ID=cds.g8470.t1;Parent=g8470.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 89 382 . - . ID=g8470.t1.exon2;Parent=g8470.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 89 382 . - 2 ID=cds.g8470.t1;Parent=g8470.t1 #PROT g8470.t1 g8470 MSVSMIPTKRPYDLLEGADVPASPMHLMKRCRYTASSPPSSPPHAGSPSPQHVYRRPHVDSAFVSTVPAEPVERYLPTAKRRRTDGHDAMSPVHQLHDQQHVLAHQAEQHVHAVLQHQQQQHQQPQQQMTEVYFTLDQVRAIVAKAVEEREMQLRSEYDGILQRKLG # ORIGINAL: g8474.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 16154 19327 . + . ID=g8474;Name=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 16154 19327 . + . ID=g8474.t1;Parent=g8474;Name=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 16154 16832 . + . ID=g8474.t1.exon1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 16154 16832 . + 0 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 17095 17228 . + . ID=g8474.t1.exon2;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 17095 17228 . + 2 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 17551 17665 . + . ID=g8474.t1.exon3;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 17551 17665 . + 0 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 18007 18120 . + . ID=g8474.t1.exon4;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 18007 18120 . + 2 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 18314 18391 . + . ID=g8474.t1.exon5;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 18314 18391 . + 2 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 18615 18752 . + . ID=g8474.t1.exon6;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 18615 18752 . + 2 ID=cds.g8474.t1;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 18966 19327 . + . ID=g8474.t1.exon7;Parent=g8474.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 18966 19327 . + 2 ID=cds.g8474.t1;Parent=g8474.t1 #PROT g8474.t1 g8474 MATASSSTTAGDDPTAPTHAPGHKRSRSTTELVRRLIGAAIGVGSGSSVLSPHGNSAVATFTTSEAEGGRTVRHPSPKPSRIRRRHTDQSLGGISSPSDTRRHSDGSRRQLQGRAQSSDALRVPSQSSLVALGETDTEGEGAGTEGSLSGCSDSEDDGDGDGGSTGNNHSDTADDDDGSSVRGSNFEADAFGDGVSFGSDEGNGLRMIKAGMRDHIASVIPGKGKKVLYTCGECNKTFQAYRTQLASGAVPFHECSPYQSNEPIQMRADAKVSHQNPLYTPSAVVNENPLYDANLSFRVAAAQKRPSFAELSEKLRVFGIPLDKACDMSCGTVPLVVTELVAAVEERGLHTEGIYRLSGSQEEVFRIRTCYDRGDIALDLGPTRCPDVHSIAGALKLYLRELPEPLFMRSLFEEWRDVAGMVVGAVSASASTTAGVCDESTRLTRTRELLSRLPKCNRSTARFLFAHLERVAAASGDNKMGPANLGIVFGPTLFVGSGQLAPSDTLESLTQGAIESKAMGALVAWMIGAPRALFADTQT* # ORIGINAL: g8473.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 11899 15490 . - . ID=g8473;Name=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 11899 15490 . - . ID=g8473.t1;Parent=g8473;Name=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 14876 15490 . - . ID=g8473.t1.exon1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 14876 15490 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 14378 14659 . - . ID=g8473.t1.exon2;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 14378 14659 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 14065 14178 . - . ID=g8473.t1.exon3;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 14065 14178 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 13382 13564 . - . ID=g8473.t1.exon4;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 13382 13564 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 12671 13155 . - . ID=g8473.t1.exon5;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 12671 13155 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 12356 12545 . - . ID=g8473.t1.exon6;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 12356 12545 . - 1 ID=cds.g8473.t1;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 11899 12126 . - . ID=g8473.t1.exon7;Parent=g8473.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 11899 12126 . - 0 ID=cds.g8473.t1;Parent=g8473.t1 #PROT g8473.t1 g8473 MSLFGARPKLSMFRDDSGGASDKFGAARNVMRARLRAEQTTVNQVVTESSGTRVSNVAFFAVLPVTLTVVVIIFCCIDQATFVTGGVDFDGLRFAFTDLTTDQSRAAVGSGARVQANLLGAIVSVTGFVLQLSINRFGPQVRTLFFGQIAPALYVAMIVSGVILNTVFTYMCSGPSTYVPRYSAMLGMFLVYLNMLAVWPYMSLLFQFLEPGKIIGHTRNACMRSFGFSNDAETDDAAMLNGLTEDKIEKRKLQLTKSSEYLYAVAHTALSRNERNVAHTALNAMLVVHSSYIHMKAMLPPGWFSVPAWMRHSVDFASLHLDYITSLEDTRTWFEFKIFKQYLLLFGSAIKDIKDICTIIAANTRVSAVNAAHAGDMAALDLSIKFFNSYLRTAINASDAKVATTVLHQYRMLAETLMSEDEFRTDAPPDGGAFDHIAGGRRRRGSPVTGVASSMAITVEEPVDDVVVTESMPGVPDGVYDESMNNVGQLGSPSSQRLHSMSGVWGKADGTAPLHRVSVSASSANVGNSLATKENDYGMAGTVRLRALRIAEHMVHYRNECVARKLHIIAEFVGYDLASLCEAAFLCNSQCHDPILDLTINPAHLKGWSFGVEELPKGILRAKIKLATAYMAMGANAHAREIRDMLGGESKDAVRTACDRLESTVNRDFWEVIDRNVNVDFVPEAQRKMLSVFLSWFK* # ORIGINAL: g8471.t1 original gene structure, not modified by PASA NODE_256_length_29052_cov_41.6585 AUGUSTUS gene 1532 7366 . - . ID=g8471;Name=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS mRNA 1532 7366 . - . ID=g8471.t1;Parent=g8471;Name=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 7095 7366 . - . ID=g8471.t1.exon1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 7095 7366 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 6829 6913 . - . ID=g8471.t1.exon2;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 6829 6913 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 6319 6560 . - . ID=g8471.t1.exon3;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 6319 6560 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 5993 6130 . - . ID=g8471.t1.exon4;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 5993 6130 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 5666 5759 . - . ID=g8471.t1.exon5;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 5666 5759 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 5355 5531 . - . ID=g8471.t1.exon6;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 5355 5531 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 4950 5094 . - . ID=g8471.t1.exon7;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 4950 5094 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 4565 4657 . - . ID=g8471.t1.exon8;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 4565 4657 . - 2 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 4005 4180 . - . ID=g8471.t1.exon9;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 4005 4180 . - 2 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 3667 3698 . - . ID=g8471.t1.exon10;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 3667 3698 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 3134 3503 . - . ID=g8471.t1.exon11;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 3134 3503 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 2692 2873 . - . ID=g8471.t1.exon12;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 2692 2873 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 2455 2503 . - . ID=g8471.t1.exon13;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 2455 2503 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 2161 2234 . - . ID=g8471.t1.exon14;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 2161 2234 . - 0 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 1979 2040 . - . ID=g8471.t1.exon15;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 1979 2040 . - 1 ID=cds.g8471.t1;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS exon 1532 1827 . - . ID=g8471.t1.exon16;Parent=g8471.t1 NODE_256_length_29052_cov_41.6585 AUGUSTUS CDS 1532 1827 . - 2 ID=cds.g8471.t1;Parent=g8471.t1 #PROT g8471.t1 g8471 MLATEYINDNPNILPNIRVELVRRFEQCTSTKAVPATLELMQDPVGVIGVVGPQCGGLLARQAAQLCAVFSKPIVSFAAATEDLSNKLIYPYFLRTFTSTNLNQLGYVAMAHSFGWKSVAFITSQDNPFNSLVYQRADQWGINVDFDLRLPAGLANYSSYLAPLKERDMRVMITTLTGTTMTKVCEAAVSTGLVGPGYVWFVSLTGITDCLASKPPATQRMFAGTFVAEKVFDGGAPDLITWYTQRYESRTMKSFDPTFNAIKPPVMAEKQSPSFDAVLAFALAYHQLAVVKNDSSPDGPKLLAELRALNFTGLSGQVNFDANGDRMMPVTFYNLQVNYSSPSLALFSPTVRRVTFDASLAVATVATVAPVVWADNQTALVPRDFVCSNGCYNGTCVAKGICTCFRGWIGPACETHRKSTLSAGAIAGIVTGSGTLFASAMIIIFAYARRAARKRERSWIIDRSELEMKEKLGEGSFGDVHKAIWRGTIVAVKTLKMQGGGHDGDTAHAVDRQSKRSAGQSLLGTVSQIASVGSAAGVSALGSSLNGSESISEHRSGWSAGNSRKSSIILGFRRAIKQRRIAQAVTDEFMREIETMVKLRHPNIVMFMGASTDVQRMCIVVEFMPGGTLMGIYEDAEVTLDWTARLSMLADACKGLEFLHSGNPPLLHRDVKSLNLLADDRLRIKVSDFGLALLSDKQKSSADITGSLLWIAPEILQDHDYTTKADVYSFGIVITELLNRQRPYLPPHHVTADSRTHRSTDGELAALILQVAHADLRPYMSETLPSRLRDLINKCLSRSVAERPEFTEISVVLGELRAECNAWPPPDN* # PASA_UPDATE: g2142.t1, single gene model update, valid-1, status:[pasa:asmbl_3990,status:12], valid-1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . gene 321 838 . + . ID=g2142;Name=g2142.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . mRNA 321 838 . + . ID=g2142.t1;Parent=g2142;Name=g2142.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . five_prime_UTR 321 322 . + . ID=g2142.t1.utr5p1;Parent=g2142.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . exon 321 838 . + . ID=g2142.t1.exon1;Parent=g2142.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . CDS 323 502 . + 0 ID=cds.g2142.t1;Parent=g2142.t1;5_prime_partial=true NODE_2300_length_6808_cov_40.8583_potentialcontaminant . three_prime_UTR 503 838 . + . ID=g2142.t1.utr3p1;Parent=g2142.t1 #PROT g2142.t1 g2142 KHIDWEGAQLIDAAQSLVDGTEAFYPQPERAFKSSETVKYSLAGYDLERKQALASRRKA* # ORIGINAL: g2144.t1 original gene structure, not modified by PASA NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS gene 5944 6715 . + . ID=g2144;Name=g2144.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS mRNA 5944 6715 . + . ID=g2144.t1;Parent=g2144;Name=g2144.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS exon 5944 6019 . + . ID=g2144.t1.exon1;Parent=g2144.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS CDS 5944 6019 . + 0 ID=cds.g2144.t1;Parent=g2144.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS exon 6279 6715 . + . ID=g2144.t1.exon2;Parent=g2144.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant AUGUSTUS CDS 6279 6715 . + 2 ID=cds.g2144.t1;Parent=g2144.t1 #PROT g2144.t1 g2144 MDTLPIEIVDVILYAGRALAGRRCTACLTFSVGDVSFRGGVKASDVMADSAVSTVRTWAIYAATMQKEVPSTWHEIDTLFPRVAKEETGREWDSVMRPGLKADAVLCNLLPHLNHPTIPIEVAFSLLVHDGSYGYPSAYGGIGRPYFHLLPLDKWVMEGDALKDVYVLQW* # PASA_UPDATE: g2143.t1, single gene model update, valid-1, status:[pasa:asmbl_3991,status:12], valid-1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . gene 1259 4688 . - . ID=g2143;Name=g2143.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . mRNA 1259 4688 . - . ID=g2143.t1;Parent=g2143;Name=g2143.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . exon 1896 4688 . - . ID=g2143.t1.exon1;Parent=g2143.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . CDS 1896 4688 . - 0 ID=cds.g2143.t1;Parent=g2143.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . exon 1259 1636 . - . ID=g2143.t1.exon2;Parent=g2143.t1 NODE_2300_length_6808_cov_40.8583_potentialcontaminant . CDS 1259 1636 . - 0 ID=cds.g2143.t1;Parent=g2143.t1 #PROT g2143.t1 g2143 MSSSRTDSKRIAESMKGILAARGGRIESSEFGQHLRSEGYAGNTKDFLKEFSDEFERPHNTYICRTQSEGDVLLDSISQLVVEKIEAEGRIHGGVLGTLLKKSGYYGTIKDFLAETSDVFEHRRDNYVYCVALDNDDESSTGCSTDSTNPDAQYIIDLVRAMIAADKRISFNLLEGLLRMKGYPGSALQFLIECRDEFVYDSSDEHVYSKTDTRSGANEQSKALPTHTRRALPTLPVGADANASPGASGSVVKPSPPASNAATSTTASRAIVIPSTAASGSASTARVTDALSAFATTSASTAEHVTTHTLTSASAPNRTGTASATVDIAAIPFEFVDSPAKLLVAQTRMSLSDTVAIDCEWAGDDEAPTLALIQIHASAAHNQAAVIYILDALSPLVGPQCVQLLWSIVCDETVTKIFHDARHDIDILRRSIGGYASAAANLSELTRITDIQVMYGHVRYFEGEANKRRAGFNEVMDYLGLPANPFKEAMHARFDLEPDLWTRRPMERQVLAYAAWDVRPLLDAHVMLRGRVAEAALALVQRGTSIAVEEYRQSTHSTRGGQVVRLDEVYRIDGWNVGRKAFMYSRVDPDGGTGHDTRAGASVRGRDRARVDGVELSIAVHAGTANTVVDGDDSNNSGSGGDWAQQMTREDEANVLLSLLPDVMRASIEAKCAEMGAGCESLCEVRIDHGKPISVLFNDDAETQHTFDGVEGSVADVIQALRERRREGTDGRGGQGPLFGRDNRTGIEGTLHRISAIRDKHGDIVGITFRIGHAETGSAYILSDVIASVLPALKTAPPKSLLIVGRPGAGKTTLLRDISRRLADVHGVAQRVVIVDTSGEIGGEGQIAHVAVGRARRMHVPGALEDTLIEAVQNHNPRVLVVDEIGHASHVRAVRTIAQRGTALVGTAHGTSLASLMKNPDMTPLVGGLVSMPVGDAMAQKLASRGGFRKTITERQGEPVFARLVEIQERRHVIVHWDVAATVDTMLGNAATAVREERWYDAAEGHWRARFSRVAASDAGRCDGLHDDGPDWMRKLVDKAMRVGGSAGAASSVWEN* # PASA_UPDATE: g4679.t1, single gene model update, valid-1, status:[pasa:asmbl_9350,status:12],[pasa:asmbl_9351,status:12], valid-1 NODE_781_length_17773_cov_39.8448 . gene 2177 4072 . - . ID=g4679;Name=g4679.t1 NODE_781_length_17773_cov_39.8448 . mRNA 2177 4072 . - . ID=g4679.t1;Parent=g4679;Name=g4679.t1 NODE_781_length_17773_cov_39.8448 . five_prime_UTR 3917 4072 . - . ID=g4679.t1.utr5p1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 3884 4072 . - . ID=g4679.t1.exon1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 3884 3916 . - 0 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 3608 3786 . - . ID=g4679.t1.exon2;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 3608 3786 . - 0 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 3433 3504 . - . ID=g4679.t1.exon3;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 3433 3504 . - 1 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 3238 3309 . - . ID=g4679.t1.exon4;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 3238 3309 . - 1 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 3074 3145 . - . ID=g4679.t1.exon5;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 3074 3145 . - 1 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 2910 2981 . - . ID=g4679.t1.exon6;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 2910 2981 . - 1 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 2754 2820 . - . ID=g4679.t1.exon7;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 2754 2820 . - 1 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . exon 2177 2506 . - . ID=g4679.t1.exon8;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . CDS 2366 2506 . - 0 ID=cds.g4679.t1;Parent=g4679.t1 NODE_781_length_17773_cov_39.8448 . three_prime_UTR 2177 2365 . - . ID=g4679.t1.utr3p1;Parent=g4679.t1 #PROT g4679.t1 g4679 MEKHVGRLGGIGNRHSYVALRSGDNRLSALVVAVCLLFFQTEGVIGACPNTCTCNGGAVLSCAFPTGTTELNWIGEQLTSIASGVFDGLPGLKKLYLGGNQIATLPSGIFDKLTALTWLDLGGNIIATLPSGIFDKLTALTVLGLSSNQIATLPSGIFDKLTALTELSLSANRIATLPSGIFDGLSKLSGVPLGSNPGNKGNLCSNIAVDVSQKHAPTAFVNSVGQARHALQFAL* # ORIGINAL: g4681.t1 original gene structure, not modified by PASA NODE_781_length_17773_cov_39.8448 AUGUSTUS gene 7632 9314 . - . ID=g4681;Name=g4681.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS mRNA 7632 9314 . - . ID=g4681.t1;Parent=g4681;Name=g4681.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 9055 9314 . - . ID=g4681.t1.exon1;Parent=g4681.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 9055 9314 . - 0 ID=cds.g4681.t1;Parent=g4681.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 7632 8724 . - . ID=g4681.t1.exon2;Parent=g4681.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 7632 8724 . - 1 ID=cds.g4681.t1;Parent=g4681.t1 #PROT g4681.t1 g4681 MRAKSKVGDVDDVETLVQEAKFPSTMLRQPSVIDRTAEDINALPFFKTSIVNPKQHVDNIFDAWKRIQSRAHAEFQQLADSDARLRSRPINDDVITADIIKTLSIPLEAVSITWPAPPLPSVDSAPVKLLVEQLKAVKATSVFASRDADVDELIESLEAIRTLACKSDATVTMTAVDILKMACEPIARFVTTDIHREFLDTDARRKQIMENINDAHRRVAGNKNAEKCVPDAERDLSSAIAALARNVGELGRLAENADRLRAEFTDGCATSNDEAVARASTLTDQCRVDVKNFEATATGLSALTAACLQVQTKAETASAAWDKVAQAEKDFEEYAVFATEEQLYAGSASLEKLVAARRLVNSLVEVASALRHEAAIHMEAGLEIRNCDNVELLGTAETACRTRSGEGRADSRVCVEGKRGRGARIIIALQRENSARSILQTSRPVEEASR* # PASA_UPDATE: g4683.t1, single gene model update, valid-1, status:[pasa:asmbl_9352,status:12], valid-1 NODE_781_length_17773_cov_39.8448 . gene 14441 17634 . - . ID=g4683;Name=g4683.t1 NODE_781_length_17773_cov_39.8448 . mRNA 14441 17634 . - . ID=g4683.t1;Parent=g4683;Name=g4683.t1 NODE_781_length_17773_cov_39.8448 . five_prime_UTR 17617 17634 . - . ID=g4683.t1.utr5p1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 16981 17634 . - . ID=g4683.t1.exon1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 16981 17616 . - 0 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 16120 16813 . - . ID=g4683.t1.exon2;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 16120 16813 . - 0 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 15619 15719 . - . ID=g4683.t1.exon3;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 15619 15719 . - 2 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 15142 15329 . - . ID=g4683.t1.exon4;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 15142 15329 . - 0 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 15000 15024 . - . ID=g4683.t1.exon5;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 15000 15024 . - 1 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . exon 14441 14785 . - . ID=g4683.t1.exon6;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . CDS 14621 14785 . - 0 ID=cds.g4683.t1;Parent=g4683.t1 NODE_781_length_17773_cov_39.8448 . three_prime_UTR 14441 14620 . - . ID=g4683.t1.utr3p1;Parent=g4683.t1 #PROT g4683.t1 g4683 MRKEMRKLARVTLYTFDAVFDPADCPPERNGSCIGLTYTDTAPRGNLLSDQEMWNYFMLDVEGFFLMNTGLEMNVKHSAEDGNEFFVKQIFFLGRSFDSAEALLAEWDADESYRVKLDYELDSDPLWSTLRRRGNGRAFEDRKGPRMQEPQGPRYTVSGQTLEWMDWKLHLGNNFEVGPRIMDVSFKGERIAYELSLSEALASYSSISSPAQANVYYLDSAWELGVGMFELVPGLDCPEHATFLDLYFVGPDGLERRRHGVCIFEEDLGKPTIKHFDNNWDDGSYYWVAGVRGTRLVISMTLTVNNYDYCVRWMLNYDGSIDFHTSASGFIQSGHYYAADHPYGTRIRKNGMATLHDHLLSLKLDLDIKGAENSFEVAKVKVETREIPHLKQRRSQKVIERTVLKSEDESRLRIDPSSPAFWTVINPSKPNEWNEPAGYRIHPGTYVRSLLDRDSPQVKSSTWALDNVAVTLRKDEEDRNSHGCNQPVLDTPYVDFDTFFNSEPLEKQDIVVWLTLGTMHLPTSEDIPNSLLHSGNMMASIKPASYFKENPITESLDSIYISRSNKVSDVVYSDLGGVPCAVKPKPFDYEGTTLQEDFAVEE* # ORIGINAL: g4680.t1 original gene structure, not modified by PASA NODE_781_length_17773_cov_39.8448 AUGUSTUS gene 5969 7596 . - . ID=g4680;Name=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS mRNA 5969 7596 . - . ID=g4680.t1;Parent=g4680;Name=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 7480 7596 . - . ID=g4680.t1.exon1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 7480 7596 . - 0 ID=cds.g4680.t1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 7246 7360 . - . ID=g4680.t1.exon2;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 7246 7360 . - 0 ID=cds.g4680.t1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 7063 7111 . - . ID=g4680.t1.exon3;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 7063 7111 . - 2 ID=cds.g4680.t1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 6789 6977 . - . ID=g4680.t1.exon4;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 6789 6977 . - 1 ID=cds.g4680.t1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 6459 6592 . - . ID=g4680.t1.exon5;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 6459 6592 . - 1 ID=cds.g4680.t1;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS exon 5969 6342 . - . ID=g4680.t1.exon6;Parent=g4680.t1 NODE_781_length_17773_cov_39.8448 AUGUSTUS CDS 5969 6342 . - 2 ID=cds.g4680.t1;Parent=g4680.t1 #PROT g4680.t1 g4680 MSSSDEIRSARSAFMAEIDLMRTIPNHPNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKVSDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRAPNSFENGWKLSPKAQVIVKVADMGLSRDTGASGDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMESPKDCPKLVYAAMETCWRKHAETRPQFSQLVLQLRRGMAALCGTEGGVGVGGVGVNLDGANPTDGLSGQSETYALTVPESAYAETLKPDEEGHLHTLENVMFQKDGSSTGHSSA* # PASA_UPDATE: g4682.t1, single gene model update, valid-1, status:[pasa:asmbl_9348,status:3], valid-1 NODE_781_length_17773_cov_39.8448 . gene 10752 12948 . + . ID=g4682;Name=g4682.t1 NODE_781_length_17773_cov_39.8448 . mRNA 10752 12948 . + . ID=g4682.t1;Parent=g4682;Name=g4682.t1 NODE_781_length_17773_cov_39.8448 . five_prime_UTR 10752 10806 . + . ID=g4682.t1.utr5p1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . exon 10752 10943 . + . ID=g4682.t1.exon1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . CDS 10807 10943 . + 0 ID=cds.g4682.t1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . exon 11436 11621 . + . ID=g4682.t1.exon2;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . CDS 11436 11621 . + 1 ID=cds.g4682.t1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . exon 11906 12027 . + . ID=g4682.t1.exon3;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . CDS 11906 12027 . + 1 ID=cds.g4682.t1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . exon 12246 12393 . + . ID=g4682.t1.exon4;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . CDS 12246 12393 . + 2 ID=cds.g4682.t1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . exon 12783 12948 . + . ID=g4682.t1.exon5;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . CDS 12783 12906 . + 1 ID=cds.g4682.t1;Parent=g4682.t1 NODE_781_length_17773_cov_39.8448 . three_prime_UTR 12907 12948 . + . ID=g4682.t1.utr3p1;Parent=g4682.t1 #PROT g4682.t1 g4682 MSALSVDAFHASVPAGVYALCAEDSDLGQHIKDALETIEKAIAEYGIDGLSISFNGGKDCTVLLHLYRAAVARVAGETSWKEALHAVYVRSPGPFEEVEAFVEECRQSYNLRLDVIEGNIRDGLAWLRESSPQIRAILVGTRRTDPFSGNLRPFSPTDIDKGWPDFMRVNPVLDWSYALVWAFLLRLQVPYCCLYDLGYTSLGSKSNTTPNPLLKSGNGYMPAHALVQQDAERAGRSK* # PASA_UPDATE: g12536.t1, single gene model update, valid-1, status:[pasa:asmbl_6795,status:12], valid-1 NODE_3988_length_2394_cov_36.4761 . gene 95 2305 . + . ID=g12536;Name=g12536.t1 NODE_3988_length_2394_cov_36.4761 . mRNA 95 2305 . + . ID=g12536.t1;Parent=g12536;Name=g12536.t1 NODE_3988_length_2394_cov_36.4761 . five_prime_UTR 95 157 . + . ID=g12536.t1.utr5p1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . exon 95 753 . + . ID=g12536.t1.exon1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . CDS 158 753 . + 0 ID=cds.g12536.t1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . exon 1016 1158 . + . ID=g12536.t1.exon2;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . CDS 1016 1158 . + 1 ID=cds.g12536.t1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . exon 1324 1390 . + . ID=g12536.t1.exon3;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . CDS 1324 1390 . + 2 ID=cds.g12536.t1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . exon 1708 1855 . + . ID=g12536.t1.exon4;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . CDS 1708 1855 . + 1 ID=cds.g12536.t1;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . exon 2168 2305 . + . ID=g12536.t1.exon5;Parent=g12536.t1 NODE_3988_length_2394_cov_36.4761 . CDS 2168 2305 . + 0 ID=cds.g12536.t1;Parent=g12536.t1;3_prime_partial=true #PROT g12536.t1 g12536 MTMYRFQNVGKWLNRPYRISLQFYANTNRTTAYRTFVILQTVNTTASDPKYFMVGCESPSANYSVPYNRSTVYPPTGTLTGGICVPTIADFTALLRGDPDAFVVRGAPINMAVNNKYFLHVRMFRNDVHMSVVYPNNTAVPSNTQPLGYLRAQLPMPIDWEYPNMPAITAWGFGGGHERDGNVTCVTSFSLVALDKIVRFPISQDSAEPFAKFRAGNLELFEDSPSSSTGASRLINTGWNSWAYNDTASKYSGLANMPLPRQVDNSVGSANPSAAMWLFELPGEMRTRALFAFTANGTASFGVVYKAIANVINQNGTNMFLFFGCLPGSTPYSCRPAIVSSDATIIERYGYERLLVPGIWYRLE # ORIGINAL: g2925.t1 original gene structure, not modified by PASA NODE_4913_length_1145_cov_32.9178_potentialcontaminant AUGUSTUS gene 137 923 . + . ID=g2925;Name=g2925.t1 NODE_4913_length_1145_cov_32.9178_potentialcontaminant AUGUSTUS mRNA 137 923 . + . ID=g2925.t1;Parent=g2925;Name=g2925.t1 NODE_4913_length_1145_cov_32.9178_potentialcontaminant AUGUSTUS exon 137 923 . + . ID=g2925.t1.exon1;Parent=g2925.t1 NODE_4913_length_1145_cov_32.9178_potentialcontaminant AUGUSTUS CDS 137 923 . + 0 ID=cds.g2925.t1;Parent=g2925.t1 #PROT g2925.t1 g2925 MGDSTHHVSDLPLAFPPFHFCGRFKAACNTLSWTLVNINLTFTSGAYSGKIGLAQAILPLDIAGGNMVVIMNAPVDPANVVSTVRPDATSAKGDFINTRALARRGKEASKVYDFAVCQPFPGNVIVLYSLGQRQYTAPTDNITANRTYVGIPSAQDELPSLTFTSELFISANVTLSFTMIDFKAPTASLTALQPCSITLKDCTVEVSGSAFVRIMGSASLTLDNVEVTSADTDVPQEDPIFYVTTPFNAAPSRVTVVSSYFH # ORIGINAL: g13218.t1 original gene structure, not modified by PASA NODE_3281_length_3840_cov_39.1695 AUGUSTUS gene 170 1828 . - . ID=g13218;Name=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS mRNA 170 1828 . - . ID=g13218.t1;Parent=g13218;Name=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS exon 1563 1828 . - . ID=g13218.t1.exon1;Parent=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS CDS 1563 1828 . - 0 ID=cds.g13218.t1;Parent=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS exon 616 1383 . - . ID=g13218.t1.exon2;Parent=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS CDS 616 1383 . - 1 ID=cds.g13218.t1;Parent=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS exon 170 383 . - . ID=g13218.t1.exon3;Parent=g13218.t1 NODE_3281_length_3840_cov_39.1695 AUGUSTUS CDS 170 383 . - 1 ID=cds.g13218.t1;Parent=g13218.t1 #PROT g13218.t1 g13218 MTTLREFVCSLACAVGVLAAVLLPGALATCSLTSTPLPFKGFIHGLQSVNGTPAIVYSAEISWDVALQQPNSTQSQIFFIKALDKEGTTWDAPVDILNGTTLNVRFDPEGNALEDARIAFAIVNGFPAIAFVDRDASTRPLRYVRATDRQGKVWPPLQTIPANPNTTQLLVSLAGTVTTSIPAVCWSSAAAVSCIRGRNSRGTSWENFHVISTNVSATTTITTSAASGRVGLAWTSGDFTPAVTRLVTTNNTGIPLACQPQGSTLYFSRRITQTRPLVVTVDGPTDNNGFPVNIAGPYLGAANGHAAIVYFKNDYALKRTAIGLSRLISTGLSDVDLVFKQSIDQFGEVWPSSNASTSSNATSPLPEVLAAQELSFASARPEVQPSFAVASRPNTTFPAACPVVVYQTRDALYYTL # PASA_UPDATE: g13219.t1, single gene model update, valid-1, status:[pasa:asmbl_5829,status:12], valid-1 NODE_3281_length_3840_cov_39.1695 . gene 2945 3603 . + . ID=g13219;Name=g13219.t1 NODE_3281_length_3840_cov_39.1695 . mRNA 2945 3603 . + . ID=g13219.t1;Parent=g13219;Name=g13219.t1 NODE_3281_length_3840_cov_39.1695 . five_prime_UTR 2945 3168 . + . ID=g13219.t1.utr5p1;Parent=g13219.t1 NODE_3281_length_3840_cov_39.1695 . exon 2945 3603 . + . ID=g13219.t1.exon1;Parent=g13219.t1 NODE_3281_length_3840_cov_39.1695 . CDS 3169 3603 . + 0 ID=cds.g13219.t1;Parent=g13219.t1 #PROT g13219.t1 g13219 MYDRQASQMASSMSVKLPAISSSGKGQGSGEYNGTFVPKAYQNMTPYKLKRMTPIERSKYLAYQPPETTIAEAVAASSRRVAQQANATEKARCEALVRKQKQKDLDRQTGLFGAQLAKERVQMTRHLAGELAVRVDYRQPFSQG* # ORIGINAL: g4995.t1 original gene structure, not modified by PASA NODE_4916_length_1144_cov_40.0421 AUGUSTUS gene 412 925 . + . ID=g4995;Name=g4995.t1 NODE_4916_length_1144_cov_40.0421 AUGUSTUS mRNA 412 925 . + . ID=g4995.t1;Parent=g4995;Name=g4995.t1 NODE_4916_length_1144_cov_40.0421 AUGUSTUS exon 412 505 . + . ID=g4995.t1.exon1;Parent=g4995.t1 NODE_4916_length_1144_cov_40.0421 AUGUSTUS CDS 412 505 . + 0 ID=cds.g4995.t1;Parent=g4995.t1 NODE_4916_length_1144_cov_40.0421 AUGUSTUS exon 789 925 . + . ID=g4995.t1.exon2;Parent=g4995.t1 NODE_4916_length_1144_cov_40.0421 AUGUSTUS CDS 789 925 . + 2 ID=cds.g4995.t1;Parent=g4995.t1 #PROT g4995.t1 g4995 YTDAQLLTQLLYLRHLFDTEKTLKELEDYQRADANIVVQPYMDEFAAVYAMANTFVLKHARNIVDLGALFSSLNMA* # PASA_UPDATE: g8079.t1, single gene model update, valid-1, status:[pasa:asmbl_7557,status:3], valid-1 NODE_470_length_23155_cov_40.254 . gene 21020 22496 . - . ID=g8079;Name=g8079.t1 NODE_470_length_23155_cov_40.254 . mRNA 21020 22496 . - . ID=g8079.t1;Parent=g8079;Name=g8079.t1 NODE_470_length_23155_cov_40.254 . five_prime_UTR 22435 22496 . - . ID=g8079.t1.utr5p1;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . exon 22353 22496 . - . ID=g8079.t1.exon1;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . CDS 22353 22434 . - 0 ID=cds.g8079.t1;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . exon 21643 21932 . - . ID=g8079.t1.exon2;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . CDS 21643 21932 . - 2 ID=cds.g8079.t1;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . exon 21020 21425 . - . ID=g8079.t1.exon3;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . CDS 21240 21425 . - 0 ID=cds.g8079.t1;Parent=g8079.t1 NODE_470_length_23155_cov_40.254 . three_prime_UTR 21020 21239 . - . ID=g8079.t1.utr3p1;Parent=g8079.t1 #PROT g8079.t1 g8079 MLSSTRFVATVAIVAALASIASANPTQDPDRSYGGSFSIHCISKQDISGGAIGFAGGDSDSRAFSCQSLKKDVNGANGGFLTCAGKYTFNPLADTGVALAYHFLNPIDGASYLVFRIFQNGSTKVVLSTDSLGESPVTPIVTRAGPGSTTDKSGSGGIAGMVGITTSNIVCRAHMEPFFVEVPLG* # PASA_UPDATE: g8074.t1, single gene model update, valid-1, status:[pasa:asmbl_7558,status:3], valid-1 NODE_470_length_23155_cov_40.254 . gene 227 3170 . + . ID=g8074;Name=g8074.t1 NODE_470_length_23155_cov_40.254 . mRNA 227 3170 . + . ID=g8074.t1;Parent=g8074;Name=g8074.t1 NODE_470_length_23155_cov_40.254 . five_prime_UTR 227 337 . + . ID=g8074.t1.utr5p1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 227 562 . + . ID=g8074.t1.exon1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 338 562 . + 0 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 717 1003 . + . ID=g8074.t1.exon2;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 717 1003 . + 0 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 1366 1711 . + . ID=g8074.t1.exon3;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 1366 1711 . + 1 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 1941 2051 . + . ID=g8074.t1.exon4;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 1941 2051 . + 0 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 2312 2417 . + . ID=g8074.t1.exon5;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 2312 2417 . + 0 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . exon 2706 3170 . + . ID=g8074.t1.exon6;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . CDS 2706 2893 . + 2 ID=cds.g8074.t1;Parent=g8074.t1 NODE_470_length_23155_cov_40.254 . three_prime_UTR 2894 3170 . + . ID=g8074.t1.utr3p1;Parent=g8074.t1 #PROT g8074.t1 g8074 MRAILRLCAPGILGLRTCGTVPPLSRCMSTATAVHPANDTAPARAARSDAVRNNWTREEIKAIYDSPLLDLMHNAGVVHRRHFNAREVQQCTLLSIKTGGCSEDCSYCPQSSKYKTEVKAQNLMNVDEVIEAARKARDAGSTRFCMGAAWRDVVHRKSNFKSVIGMVKEVRSMGMEVCCTLGMLDADQARQLKEAGLTAYNHNLDTSREFYPKIITTRSYDERLQTLENVRNAGINVCSGGIIGLGEAESDRIGLLHTLATLPAHPESVPVNALVPVQGTPLAAQEKVNIWEMLRMIATARIVMPTTMVRLSAGRVNFSMAEQALCFMSGANSIFTGDKLLTTKNNAFTEDSEMFGILGLVGKEPSFEASSAAHVTTAHDAVGTETKSGGCGGGGCGKNGGCGGRATADSDPGVATAAAH* # PASA_UPDATE: g8075.t1, single gene model update, valid-1, status:[pasa:asmbl_7559,status:12], valid-1 NODE_470_length_23155_cov_40.254 . gene 3654 8145 . + . ID=g8075;Name=g8075.t1 NODE_470_length_23155_cov_40.254 . mRNA 3654 8145 . + . ID=g8075.t1;Parent=g8075;Name=g8075.t1 NODE_470_length_23155_cov_40.254 . five_prime_UTR 3654 3721 . + . ID=g8075.t1.utr5p1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 3654 4165 . + . ID=g8075.t1.exon1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 3722 4165 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 4466 4562 . + . ID=g8075.t1.exon2;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 4466 4562 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 4804 5033 . + . ID=g8075.t1.exon3;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 4804 5033 . + 2 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 5172 5291 . + . ID=g8075.t1.exon4;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 5172 5291 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 5538 5598 . + . ID=g8075.t1.exon5;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 5538 5598 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 5785 5886 . + . ID=g8075.t1.exon6;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 5785 5886 . + 2 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 6115 6291 . + . ID=g8075.t1.exon7;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 6115 6291 . + 2 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 6400 6485 . + . ID=g8075.t1.exon8;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 6400 6485 . + 2 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 6853 6938 . + . ID=g8075.t1.exon9;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 6853 6938 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 7167 7293 . + . ID=g8075.t1.exon10;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 7167 7293 . + 1 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 7548 7691 . + . ID=g8075.t1.exon11;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 7548 7691 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . exon 7923 8145 . + . ID=g8075.t1.exon12;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . CDS 7923 7988 . + 0 ID=cds.g8075.t1;Parent=g8075.t1 NODE_470_length_23155_cov_40.254 . three_prime_UTR 7989 8145 . + . ID=g8075.t1.utr3p1;Parent=g8075.t1 #PROT g8075.t1 g8075 MSDAPAATAPAAGEPLSKNEQKRLAKAELKAKEKALRHEKQAATAAATSTGDKDGDNSHADEEALDANQYFEIRGRQVSAMQAEGIKPYPHKFHVSISLSDYLEKYASLETAQTLQETVSVAGRIHAKRAQGSKLIFYDLRGEGVKLQVMADARTHVGEDFAKVHGRIRRGDILGIKGYPGKSKRGELSIFPTEVTLLSPCLHMLPALHFGLKDMETRYRQRYLDLIMNENVRQKFIARTRIINYLRRFLDELGFLEVETPMMNMIAGGAAAKPFVTYHNDLNMNLFMRIAPELYLKMLVIGGMDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYNDLFSITETLLSGMVKTITGGYKIKYHPNAENPAEEVEIDFTPPFRRISMVSGLEERLGVTFPPATEFGTDVMNKFLNELCVKHNVDCTPPRTTARLLDKLVGEFLEVECVNPTFICDHPQIMSPLAKWHRSIPGLTERFELFVSKKEVCNAYTELNDPVYQRERFAEQAKDKAAGDDEAQMIDETFCKALEYGLPPTAGWGLGLDRLTMFLTDSNNIKEVLLYPAMKPEEGVAAEKSAQ* # ORIGINAL: g8078.t1 original gene structure, not modified by PASA NODE_470_length_23155_cov_40.254 AUGUSTUS gene 18768 20649 . + . ID=g8078;Name=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS mRNA 18768 20649 . + . ID=g8078.t1;Parent=g8078;Name=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 18768 19010 . + . ID=g8078.t1.exon1;Parent=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 18768 19010 . + 0 ID=cds.g8078.t1;Parent=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 19317 19780 . + . ID=g8078.t1.exon2;Parent=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 19317 19780 . + 0 ID=cds.g8078.t1;Parent=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 20079 20649 . + . ID=g8078.t1.exon3;Parent=g8078.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 20079 20649 . + 1 ID=cds.g8078.t1;Parent=g8078.t1 #PROT g8078.t1 g8078 MQLISLKFGLAACSYLLSLSIVLGGSGVAAYNNGAALTPPMGWSSWNTFACNVSESLIKGVADTMVANGMRDAGYVYVNIDDCWMRCSNRSDDTCHSPEDGRDESGRLVPDPARFPSGMKALADYIHSLGMKFGMYSSSGKTTCSSFAGSWQNEAVDAETFASWGVDFLKLDCCSSTKAMKDIAYPAMSDALNKTNRVIVYSCDTDELFANPLLALESGERPYAWGPSKCNMIRTSGDIKDDWFRVLLNLDLNDHWWDLTDMAAYAGPGTWNDPDMLVVGMGKLSKAQYRSHFFLWAIMAAPLVAGNDVRAMDAETLELLTSPEVIAVDQDSLGVQGRRLRFGPVDGHEVWYKPLADGSRAVVFFNRSLFDGARICVSYADIGLPSEAECAVRDLHARKDLGTARGSFCGSGIASRDSMIVRIAC* # ORIGINAL: g8076.t1 original gene structure, not modified by PASA NODE_470_length_23155_cov_40.254 AUGUSTUS gene 8481 13347 . - . ID=g8076;Name=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS mRNA 8481 13347 . - . ID=g8076.t1;Parent=g8076;Name=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 12824 13347 . - . ID=g8076.t1.exon1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 12824 13347 . - 0 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 12457 12557 . - . ID=g8076.t1.exon2;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 12457 12557 . - 1 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 11800 12087 . - . ID=g8076.t1.exon3;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 11800 12087 . - 2 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 11008 11538 . - . ID=g8076.t1.exon4;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 11008 11538 . - 2 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 10701 10728 . - . ID=g8076.t1.exon5;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 10701 10728 . - 2 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 10259 10430 . - . ID=g8076.t1.exon6;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 10259 10430 . - 1 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 9890 10055 . - . ID=g8076.t1.exon7;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 9890 10055 . - 0 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 9462 9808 . - . ID=g8076.t1.exon8;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 9462 9808 . - 2 ID=cds.g8076.t1;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 8481 9299 . - . ID=g8076.t1.exon9;Parent=g8076.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 8481 9299 . - 0 ID=cds.g8076.t1;Parent=g8076.t1 #PROT g8076.t1 g8076 MAGSSEAQCGHCGGVCRANNAEDSVKFIKWTGACEEDAHLSRHSVQTQGLLLSITAPAKDDQRSSNCVGKSGSFSHSPSREGDNWFAANALPQTTTCAVDRDSVRHAHISVEESISECEDVHMGCRALSGASVGVQDMPPEVLSCIMEWLPSADLISAASVCHVWLAVGVDILRRRKTLDFADECLRTTDAHLFFVANYLEPVALNLSGCQLLTSSGLSAVVKSPGCSLSLKRLCMRNCDISGSSYKVLCQLPSVECVDLSHSVYPLLAGRPSFGPTVEEAVLHDTAYIGGNDQSVPEIIGSRIYLWRWPQFGALRRLSISYIQDDFLAKLRSDTLTELDVHRSHFRTPDTLARLTRLESLALRDVSFATWPPSAQWHPMARIMRGCTQLTRLVVENVRPSVSRENDIAVWIQSAAATPADRGDMVDGGDGMHPVMVPRVSLEYLEIALPDELSDAGLRSVADALGGGLKGLVLHSASRLTDDGVAAFAERCHNVERLWIPHAAHITDRSAVAIAAGCRQLTSLNITLCTLMGPIGLRAIASSCGQLKEVRMRGLHAAAIDAQSLCALRGRGCRVVYMHPVTHTQAPRALVPIEMRRTIAMHTGARHDAMTAEDAVTSAWQPHKTNAPVTGNHKAVTARDVAAEADASLSAAIVTAVTMEMTARQDGSHTAISAKWSRGMHATTVVAGAQLGDRRCSGGDMLVLCPASCGASIRPCALEDHRTVCPGERVTCPLAQYGCPVTMGRSDVHAHLSRACVYYTVTCHECSAPVTRMDYCEGGHARAHVMRVEHDALDESRYRCPMWRAGCAFPWNVCRDMYRDESTTRSVTQHSGVSPSHPDALHPNAPHSDAQCTGAHSLACFRCGRVDLDRARLGAHGCNVSGYAVPLRGLCVDDRAAGRASRGQSRAWDGMATTTAGGCATRTLHTGDSIQRRLQRQLHADSADIAAYGAAAEVEAGVADWEAWLPVLPMRWRAEEIRKLTALLATPRGGE* # ORIGINAL: g8077.t1 original gene structure, not modified by PASA NODE_470_length_23155_cov_40.254 AUGUSTUS gene 15247 17144 . - . ID=g8077;Name=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS mRNA 15247 17144 . - . ID=g8077.t1;Parent=g8077;Name=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 17112 17144 . - . ID=g8077.t1.exon1;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 17112 17144 . - 0 ID=cds.g8077.t1;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 16559 16759 . - . ID=g8077.t1.exon2;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 16559 16759 . - 0 ID=cds.g8077.t1;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 15956 16273 . - . ID=g8077.t1.exon3;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 15956 16273 . - 0 ID=cds.g8077.t1;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS exon 15247 15735 . - . ID=g8077.t1.exon4;Parent=g8077.t1 NODE_470_length_23155_cov_40.254 AUGUSTUS CDS 15247 15735 . - 0 ID=cds.g8077.t1;Parent=g8077.t1 #PROT g8077.t1 g8077 MAGAGKTTFMQRLNSHLHQHKRPCYVLNLDPAVRKLPYGANIDIRDTVNYKEIMKQYNLGPNGGILTALNLFTTRFDQVLGFVEKRAPEQDYILVDTPGQIEIFTWSASGAIITEALASSFPCVVVYLIDTPRCTSPVTFMSNMLYCCSIMYKTRLPFVVVFNKTDVVSHEFAKEWMSDWEAFQEAVAAETSYMGSLARSMSLVLDEFYANLRTVGVSAVTGEGIDEFFGAVDEAAGEYAREYKPELERMRAEKDARLAKEREEQLRRLETDYTQHGGKVAMDARAEGLDVHDSDGSDDSDDSDDEAYGNDGSDGDDDGEERGERGDEAMELASFNAYLNRQLNLQ* # PASA_UPDATE: g193.t1, single gene model update, valid-1, status:[pasa:asmbl_8422,status:3], valid-1 NODE_5_length_81936_cov_43.179 . gene 45990 49975 . - . ID=g193;Name=g193.t1 NODE_5_length_81936_cov_43.179 . mRNA 45990 49975 . - . ID=g193.t1;Parent=g193;Name=g193.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 49831 49975 . - . ID=g193.t1.utr5p1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 49732 49975 . - . ID=g193.t1.exon1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 49732 49830 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 49443 49574 . - . ID=g193.t1.exon2;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 49443 49574 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 49022 49270 . - . ID=g193.t1.exon3;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 49022 49270 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 48782 48884 . - . ID=g193.t1.exon4;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 48782 48884 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 48526 48607 . - . ID=g193.t1.exon5;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 48526 48607 . - 2 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 48000 48201 . - . ID=g193.t1.exon6;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 48000 48201 . - 1 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 47730 47801 . - . ID=g193.t1.exon7;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 47730 47801 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 47493 47557 . - . ID=g193.t1.exon8;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 47493 47557 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 47185 47287 . - . ID=g193.t1.exon9;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 47185 47287 . - 1 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 46765 46890 . - . ID=g193.t1.exon10;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 46765 46890 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . exon 45990 46592 . - . ID=g193.t1.exon11;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . CDS 46122 46592 . - 0 ID=cds.g193.t1;Parent=g193.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 45990 46121 . - . ID=g193.t1.utr3p1;Parent=g193.t1 #PROT g193.t1 g193 MASIRAICAFAVLALCVAPLNAAPVEFKQKYSAISCDVCTYALGKIQGLIKDHSPMSLINTVATDVCITFKIEDKNVCSLVIPEFTHEVVTVFEDVVLSPAEICGIVHLCAKDPSPLAKWNITLPSTPKPPLNPRTPPTPGSPVRRVLHLSDTHHDPLYTVGLNTQCGEPLCCRPPNGPGTGATSAGKWGDYNCDTPLALLENALETASKMTPPIDYIFWTGDVPAHNVWNQSRDDQLAAIQSSTDILLKYFPNTRVFPSLGNHEGAPVNSFPPPYITGDDSDDWLLDGLVKSWSSWLPTDTISTIKQGGFYTTLIEDGLRLISLNMNYCNNQNWWILINQTDPAGELQWLINTLQAAEDKGELVYIIGHIPPGSGACVDDWSFNYNIIVDRYESTILSQFFGHEHDDEFELSYDVATNSRPTSMYFAAPSITPYTNMNPGFRMYLADGGKTKLILDSLTYITDLVDANARDEPLWILEYSALDAYGMKGMQPADWHDFAVRMASDDVLFGKYFNHYYKSNLGGRTCDANCKKSMICDARASKNTPCFLGGTKEEHQRWMDAQPKSC* # PASA_UPDATE: g190.t1, single gene model update, valid-1, status:[pasa:asmbl_8421,status:3], valid-1 NODE_5_length_81936_cov_43.179 . gene 38626 41120 . - . ID=g190;Name=g190.t1 NODE_5_length_81936_cov_43.179 . mRNA 38626 41120 . - . ID=g190.t1;Parent=g190;Name=g190.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 40959 41120 . - . ID=g190.t1.utr5p1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 40933 41120 . - . ID=g190.t1.exon1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 40933 40958 . - 0 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 40741 40801 . - . ID=g190.t1.exon2;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 40741 40801 . - 1 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 40554 40636 . - . ID=g190.t1.exon3;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 40554 40636 . - 0 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 40264 40375 . - . ID=g190.t1.exon4;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 40264 40375 . - 1 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 40001 40096 . - . ID=g190.t1.exon5;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 40001 40096 . - 0 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 39719 39840 . - . ID=g190.t1.exon6;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 39719 39840 . - 0 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 39159 39579 . - . ID=g190.t1.exon7;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 39159 39579 . - 1 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . exon 38626 38958 . - . ID=g190.t1.exon8;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . CDS 38722 38958 . - 0 ID=cds.g190.t1;Parent=g190.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 38626 38721 . - . ID=g190.t1.utr3p1;Parent=g190.t1 #PROT g190.t1 g190 MVLEATVICVDNSEWMRNGDYAPTRIEAQHDAVNLICGAKTQQNAENTVAIMTGAGRVEVLVTLTTDLGKVLTSLHSVKMTGKMSLLNSLQIAQLVLKHRLNKNQRQRIVIFVGSPIDSDEGELVKLGKKLKKNNVAVDVINFGEEADNTPKLEAFVNAVNSKDGNSRLVTIPPGPHILSDILLASPIIHEDGAPPGMGGTGGFEFGVDPTVDPDLAFALRISLEEERARQEAVRRAEGGGDAAPAPRESTDVVMGGGDDEQALLAQALAMSMGGADGSGPMDFNDEAALTEEEQIRLAMQMSMAEEADSTQSSATQSRVGSASVGNSAADLNSAMQDPAFLNSVLGSLPGVDPNDERIRDALNRLGKKEGDDKDGKEGDGSARK* # PASA_UPDATE: g184.t1, single gene model update, valid-1, status:[pasa:asmbl_8418,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 2184 3830 . - . ID=g184;Name=g184.t1 NODE_5_length_81936_cov_43.179 . mRNA 2184 3830 . - . ID=g184.t1;Parent=g184;Name=g184.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 3628 3830 . - . ID=g184.t1.utr5p1;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . exon 3284 3830 . - . ID=g184.t1.exon1;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . CDS 3284 3627 . - 0 ID=cds.g184.t1;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . exon 2921 3174 . - . ID=g184.t1.exon2;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . CDS 2921 3174 . - 1 ID=cds.g184.t1;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . exon 2184 2752 . - . ID=g184.t1.exon3;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . CDS 2373 2752 . - 2 ID=cds.g184.t1;Parent=g184.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 2184 2372 . - . ID=g184.t1.utr3p1;Parent=g184.t1 #PROT g184.t1 g184 MHRLRTSNGDGVSALAPAFITKLHEIVSNPQTQNLIGWGANNDTIVIRDKEGFATRVLPSYFNHKNVCSFVRQLHIYGFTKVGDSSDILEFRNENFKQSDVSLLRKIVRRKPEKRLASNDADEDHPKARLGTHTSPTSNASAEMDEELADLRHEVQRLNKIVGEMASEMSGMRIERNKLIQGVYVALSQISSLRKQGLKEGDLKPFDVDPTLSTGIPFVDAIYHHANPHVGRHAVPSHDQVWRSIAEVQGVEDSHDAAFPEEALSASLPHPYSGNNVAGHGPDPSVYSYAVGGASGWDAVGVTEDSQLDAFVNMFQGIGAGHLRQ* # ORIGINAL: g198.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 68800 72441 . + . ID=g198;Name=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 68800 72441 . + . ID=g198.t1;Parent=g198;Name=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 68800 68869 . + . ID=g198.t1.exon1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 68800 68869 . + 0 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 69133 69417 . + . ID=g198.t1.exon2;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 69133 69417 . + 2 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 69633 70607 . + . ID=g198.t1.exon3;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 69633 70607 . + 2 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 70792 70951 . + . ID=g198.t1.exon4;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 70792 70951 . + 2 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 71130 71415 . + . ID=g198.t1.exon5;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 71130 71415 . + 1 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 71518 71629 . + . ID=g198.t1.exon6;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 71518 71629 . + 0 ID=cds.g198.t1;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 71735 72441 . + . ID=g198.t1.exon7;Parent=g198.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 71735 72441 . + 2 ID=cds.g198.t1;Parent=g198.t1 #PROT g198.t1 g198 MQLSTVGGMLIAAVIMINASVLTALPIPTHDSVQPAAHSNDTAVRVDRGTPGYQCCEQGDRGMGGPCKHNDVHGPSSWRDYPLSPVGANVKKQSCCVTGYGVPSHNPHETAVYAYKCARVPSDSVVPLGAFGCTSDWRCGGNSICARQFSTDSRCECAALEDPAPQRQCAWTDGSVPAGNTVLRRASCASKEASKQPQSAYHRCTANVCNCASPDDANYELPYTIDAPLSQCKCWLRNVRNGLRVKHSELCHSGFSMPVGTDGWEVCTCPSRDDPLTADGNCTWALAAVPTGKQVHTKWGASACASGWANSDINGTLTCGCPSIDDAQTSPTPARCHWLGNGSIPNHNMVPSGHSHLCRSGFSFRSRGAAYDVCSCPSVEDEAFNSGHPDACTWEAGMVPPRYHVVSTAVCFFQPTTGGVGANYVSSQDDARILSKEGTLPCPDATYDSPEGLMAKLNSINSSYEVGYWAFEQGTPLHAFFVAVSRQLTSQQQNSIRDRYASDGIAGASTQWGAQLNDDLFMKRVRADVPKDQCDDQCATYVTGVLQDEFSSLATLSGLFKMAKVALDTQDRMHQANVDLAKQIVEAEDSSNVKPKGGFGNFLLGLFSTVLSSAAKTFFKTNLVAKFCLHVGAGILTELKSTTTPEEYDSNASAEVAAAQLKSELADRYLRLLAAYTVTFGRLTASPTKMRMLSVIHNSFDATTEADIANEVLAQKDTILQSLVRILFPAKWQLCRTQTSLTEWRHSESPVGPIDFEVHNDICSRSKGDGYEDLISGSRQIDTTDMFSPDPTYGPRTFAWFCPNGRYDSGKTVPDSTFQSAGASGFPSVYEFQKELARAILRSPSPVSDWGWGPFTVQTPCPTD* # ORIGINAL: g200.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 76172 77247 . - . ID=g200;Name=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 76172 77247 . - . ID=g200.t1;Parent=g200;Name=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 76940 77247 . - . ID=g200.t1.exon1;Parent=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 76940 77247 . - 0 ID=cds.g200.t1;Parent=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 76470 76773 . - . ID=g200.t1.exon2;Parent=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 76470 76773 . - 1 ID=cds.g200.t1;Parent=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 76172 76282 . - . ID=g200.t1.exon3;Parent=g200.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 76172 76282 . - 0 ID=cds.g200.t1;Parent=g200.t1 #PROT g200.t1 g200 MMRDESTVVFYDRHDAATKLAARLKPAYGEAHPLVLAIPRGGVPMGKVIADKIGGDLDVVLVRKIGAPMHEEYAIGAVDETGFTMINQRSASMSGASEAYIARERLKQMETMRRRREHYTAIRDPISVEGRTVIVVDDGLATGSTMSAALRALRVKHPATLVCAVPVSPPDTAIAMRQLCDDFVCLSTPANFSAVGQWYRNFEQVDDNEVISILRSYVPLAKEESQFLSMQHEESMRHEE* # PASA_UPDATE: g194.t1, single gene model update, valid-1, status:[pasa:asmbl_8423,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 50380 52424 . - . ID=g194;Name=g194.t1 NODE_5_length_81936_cov_43.179 . mRNA 50380 52424 . - . ID=g194.t1;Parent=g194;Name=g194.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 52382 52424 . - . ID=g194.t1.utr5p1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . exon 52175 52424 . - . ID=g194.t1.exon1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . CDS 52175 52381 . - 0 ID=cds.g194.t1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . exon 51905 52028 . - . ID=g194.t1.exon2;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . CDS 51905 52028 . - 0 ID=cds.g194.t1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . exon 51431 51581 . - . ID=g194.t1.exon3;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . CDS 51431 51581 . - 2 ID=cds.g194.t1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . exon 51019 51135 . - . ID=g194.t1.exon4;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . CDS 51019 51135 . - 1 ID=cds.g194.t1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . exon 50380 50790 . - . ID=g194.t1.exon5;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . CDS 50649 50790 . - 1 ID=cds.g194.t1;Parent=g194.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 50380 50648 . - . ID=g194.t1.utr3p1;Parent=g194.t1 #PROT g194.t1 g194 MGRVSAKGAKRGQAAAPMEPPADALPVTSRAQAHLLTPPSIMPKLSMPVVGMGPLSSQLAAINAANARKATRYVASDSDSDEPREVSREPTEIKDGEPLPEKDRKKRAELPPRKYILLDSTHKPVMRPNSKHPVIFGYGPHGTGLGRLKYPRDGAKKAAKREDLYRKGSKTCTIFIREVGSQCNRKERSPLEVARHPTQVFVYEGWRERIPAPDVPKFKGYEFIWQPHVKFLRTEKLKYGKFAVAQ* # ORIGINAL: g201.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 77940 80036 . + . ID=g201;Name=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 77940 80036 . + . ID=g201.t1;Parent=g201;Name=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 77940 78271 . + . ID=g201.t1.exon1;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 77940 78271 . + 0 ID=cds.g201.t1;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 78425 79284 . + . ID=g201.t1.exon2;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 78425 79284 . + 1 ID=cds.g201.t1;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 79481 79588 . + . ID=g201.t1.exon3;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 79481 79588 . + 2 ID=cds.g201.t1;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 79717 80036 . + . ID=g201.t1.exon4;Parent=g201.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 79717 80036 . + 2 ID=cds.g201.t1;Parent=g201.t1 #PROT g201.t1 g201 MAVAGGDEGLADAALITATPVEDDKDARNGTRDALIDKMGASLPLDPPGYVPRRYIIVALVFIGMFVSYMLRSCVSSAIDSMGDSYGWSNTQQGLVLSSFFYGYIITQIPFALLARKHGGMYVLGGGMLVGSVFSALTPIGADAGLTVCILMRVGVGLATAVTYPVVHDILGRWVPPAERALSVGFVWSGSYLATGVSLGISPPIIDALRWQSVFYIYAGLAAAWFVLWMVFGASSPRTHRSASPREAHYIESSLPARFDGNSVGVTALIPWGIIARSVPVYALLAGHFANNWAAYTLMTYMPKFMKDVLGYDFKHAGFVSVLPYLALFACCSIAGRVADHLVTRKHMRVVNVRRLMQATGSLIPAACLVAAGFADSTAVGTALIVISVGMAGCNASGYGANALDLAPEFAGILLSISNTVATIPGIVSPTLTGFILDEYNCVDDGYPQAALCHTGWKIVFSIAAGIYVAGLAIFCACASSDPIVTKHAEHQRLLSASSGSIGVLTGEFRADKSDPSGTHTPCESYGSTAVIADSPIRC* # PASA_UPDATE: g188.t1, single gene model update, valid-1, status:[pasa:asmbl_8426,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 15266 33137 . + . ID=g188;Name=g188.t1 NODE_5_length_81936_cov_43.179 . mRNA 15266 33137 . + . ID=g188.t1;Parent=g188;Name=g188.t1 NODE_5_length_81936_cov_43.179 . exon 15266 15742 . + . ID=g188.t1.exon1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 15266 15742 . + 0 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . exon 15883 17768 . + . ID=g188.t1.exon2;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 15883 17768 . + 0 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . exon 17936 18051 . + . ID=g188.t1.exon3;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 17936 18051 . + 1 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . exon 18245 21541 . + . ID=g188.t1.exon4;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 18245 21541 . + 2 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . exon 21716 32239 . + . ID=g188.t1.exon5;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 21716 32239 . + 2 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . exon 32390 33137 . + . ID=g188.t1.exon6;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . CDS 32390 32994 . + 2 ID=cds.g188.t1;Parent=g188.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 32995 33137 . + . ID=g188.t1.utr3p1;Parent=g188.t1 #PROT g188.t1 g188 MANVGDNAASRRRLMHMRQDPSRTSTATPSPTGEKELVELFPIASVGSRANATTYSNSRPKGVADAWMPVAAPAEDNSWTAQTPAGHSTLAQTPFSHDARPAKSSGEQTNLPVSFPDPTRAGSATKANKKGRPSPTQPRAPASPRWATPNSRGRPHSPKRGQSGKNATTEIDDDPFYNAETYEYLREYARQRPAGLPIGNIAAIAWEDARQASTDDVNAASETPAPQTPLTRSTHTPRRRPNTHAQGSTPSVVALSASHGSISGFSLLSDDDDRTATPRESLPMSTPSSSSRPRKLPLTTPPGDTFAQTSRKGRPGSPTHSPVRPDPLVGGLEEILIGLAASHRVATEHKGQMRMITAQCLDVTRQLHGLNSDEYAKKTVRLQKLLHDPPAETDPNVLRSLGLDPKSPAERATRPEPHRILSRPTTATSHRAHRPSSSSRHESPDATVVVEDGAVDVNAEPNSSAKSVSKPGCVADIHAVVEQTQAPTAENKVAATPPNEPKPSMTRKSPQKRDKGSSHKKGDRGQRSAAADADVAPASVPADAIHSDRAEDAHNTVSTTTPIAAMIAMVAMESEGQSADVPLTPLADNELTAPVGSFAESSESAPSKKSPSEQQLEVPIAPQSEMATELSPTEERQVELQTELRSETPTDHETPSDHETPSDHETPTDRETPTYHDTMTDHETTDHETTDHETPTDHETPAERSEEKPVELQMELRSETPMEALPSQHESERAVEAMPSAAAWSPQTNPAANTPDARRPHTELLASTALNRMRAGRFVRVFVSSTFKDMASERDHVIGDAFARLGRLCRQRGVSFSEIDLRWGITEEQAKQGETISICLNMIDKCLPYFVGILGNRYGWHGTKDDAAFAATLENATGAYPWLTSWADRSVTELEIRHAALNQDYRKLGEPLSRVTFFISAKEASRDEGEGEEAGEKLRRLKDEIRDSGYRCQRYAAPEELGREVYRLLEEQIMRDFPETDVTDAVLAMQRTHEAYLQGHCSPTYQRDDGCMSRLSSLVHARTPGSVFVVSEPGLGKSSLMANWIREQGMGYIDASPSSSSSSSTPPADPTSSKHPGCRCLYWFVAASPSCSSPLKMLLSLCAMLGRWLGVKDAVINALDRTGSLEQVTKNFINLLQQAARTTSEETPGGRLVFVVDGLDELGQDVAAGTGCDADHTDWIARVLDAQALMPECLRFVATHVTGWEGAARLVAPAHTGGVGRRTHAYEVVALRPFTRTQSDSMISQFGSIYGKTWSPRQHSALYGGMMPVARANPMFLALVLDTLRVHATFESADSLAESLSSCSDVEDLVDSLFGHLESRLASRLPTDAKHSPQELAKTIVGKLVRKVSLVQESVRYADVAELVSADLSAMGLGDAWSRVHEVLILSQSLIANDGDDRVFFPHYLVRSVALRRYCGDAAMEREAAAEISAYIDSKLEDDDDNYELGRLAADHHHVLKKLGDDEASSRLVESLVALHTRAGGQTDIGVDAQMAMCGLSDAQLTQLSASLSSAVKSVEDFGRSAARTLETAVHTMMKMGCESDGLSLLVAVSNRANATHNSVALELYHNALEKYASHLEESSLKDDAVARQLERLSNNMDNLLSRVAPDAQPTHQTTDGSGGVIAHMQLQILDASREIAKSSPPTTPLGALSRKIVARADAAIVLERARDTVRATLNAPRATRDVRLTEAAAAIEKCANELRAVDDDARGGRDALLGELVCQAGVCDLLRARAKDSALITQGCNAVKTGRGIVLLHGFMQKEAMWRAQYALAVLDYKMHRHVDAFDACVKARAHHNGDSDKVAVPEIDALEHKIRRQLLTPTLSITQPPTQRARFLATWSLEFRPHESMGPVNIRVVAKAVIALPGTPEEIVVHDSGASGVVAGKTMFDLPHGIYCVKVVSSTLPTENEKSALERTVEAIVSSSPTTGRPLPKDDPDAAEKFCRSCSTFCAESGPLREAYNWLIGVRDVKGRSAELELELGNCLMETREDGKDDTLIREHFTACMALCDADCAASASTLAVGHAAALALADLHLRRGSGAEALLAVNRVLNDATCDGDRKRAGMSAAAHARRLMDDPEGAARMFGTMIDRAPWDSMALVCALHDAGDLLAAHAILHPGAGSTPKDSWGWWEVPSPNMHWAHVGPHTCDWEAAEPCWHLIRAAVYAAAGDFDTAATLRQAAREAMRNVSDSGAFALLSAWQAHAETISHAPDTTDADRRAKDTRAAEQIRASVATLARHGSPPAWRAGMHVWTANLQMRDALVHARQRPSAESMAKVLAEYDLAIAAGACAFDARCGRARVFLHLRDVRQACAELAIADSVRPSSALVATMRGEALSWMCDADAAAEHFKQALSRGDGNSDDTGFAAFDSVLGLRCASVRARALAGLAWTRVLMDDCNGGEESAREACALAGALLLPLGALALGAALSRTEIELAHSEVADCLTRAAADPHWAVHALWRRAEWRQATGDVVGAASDYDAFVPSAAGAPCLPPGMTVVDAWYRAASCYWQKGSFGLAVDRATHCIAEKEHPHNAYRVRGNALHRLGKTTAAVTEREKFLARAVNDFSHMIGVDPRDMHALRMRGVCQRARGRPELSLDDHDADVALNPTDPVALYERAKSRFSAKMMQPAADDVDAALKIDPTFVRARALRAHVHAREKKWADAASNYALVSKEHLAERKRALVSFEYAECLFALARYEDAAHEYGDALSRPRFIGDASVCVAHTRRAICWLRKGLHDAAQTELKEAREPRSAEWHWCYGACRAASGDHVAAVRSFELAIKLDGKQWEYHRDMGVGRLATGAVEAAVAAFTEAVRLCPGSPSLLCARADALTAAKNYAQAVRDFSCALAPATEFPERPAALFKRALLYADRLDRPAAALDDLALLISLDATFGPALLKRAKMALARQDYSEVVSEATHALRIPRGNGWLEYGVRSAVAKTREVALSEYELDAHCTRARASHELGGWTGAVDDYGRCLDLIDAKKVADVASLRLGKAAAHAELGLMEEAESEYALSQKAVPSDAAACGLSRVCAARRDFEAACTWATEAIRLNEASATARELLGCALASIGKHGEAVAAADDAIRLHPRSILAHTTRAGSCRALGRYVEANRELTRVIALKSAAGLSFVADLCDRASISYVLGATDSALEDVETALLQSPGHPMAMCVRAEVRLLLGDLENADADFASAEAACAPSSDAVVRAHCARGRGDCAMGFGRLDDAIQSFSTAVAWCDRALVDAEEGILSAGLAVSQVCPPHDESPSGLPQHFAQTPLRLRSVLSRAEAFRNGGAHRESALADYDDAVEAARAAGAQAALWWAHYGAASVVMSAGDNVSACKHLELAVAASPAVARTKGLPDWLTFGIADVWSALGAAIHGAKGLSAAEDALRAYSEALQVKPGHFQSHVGKGIVFSARAQWDEAVRSLDKAVEIIPEDGPSLIARGLAHLALCVGSADAIVYGEPLTATTQRAIAEARRAEKDLSAGIQLGDGNHATLAALGDARMALGKYAEALADYDAALVAAGGAGNSQACIGRARALSKLAKWQEAVKAYATAETWVAGAEDAATLYEAWGDALVVLERHADAYDRHLSAVAKHREDVAQAVPVSMATQVSYGADATAKVEESNIAPLYDPQSVRRLAALGVSLRKAAASGLLSRTIDNAAAIHILTEAVTLAPNDRSAAVALGTCLFGAGEWASAADSLQRAIAMDSDDADTLALLAEAKWRLGMDDIAAAVYQRALAADADCVRAHLGLGTMLAKKDFPSAWAHLTEALRLSPSDPEILVKRSHVMLESGDIVAARRELGEASRLGCAESAVEFGLGECCRFEGAYADAAAHYTAAINRGGLLLVDALLARADALLQTEMIDQARADADAAERVRADTTDVTGIRARILLATDDAVGASTHCASVLAVHASDVQALCVRGQLRWKAGSHKDAVGDFERALAVAPTCRTAQYWLGVMCMRTDVTAARFYLSAAVLPGTAALSSRHSCKAHCILGDMALAAGNPDEAASHFDCAHSRYSLSPAAHIGKARALARMEQPEGAVQAFRAALAMGLLDEAESSVVRIELADCLVATHKPWEAEEELKRVREADTALALVRLGRVYLESAEHARAVDAFERCIAVTTKDAAAVRFRALVGLAMARKCAGDLKEALDAANRAVAIHQQLIAGKAVAGGMLRASKDTRCSAALQIAGEVRLLLGDHAGAIGDLTKALECLWADGDRDDGTITCARAECHLKGGDFFAALSDFSETKVLVVEGENKTVNPSRVVLGRARALMGLCDYATAIDALEDKCVRLDGDALLLKSAAHEHVGNYEQALEAIDAALGVHTGVSMVAQDQLSSVCARKASILVAMGRSEDAGAAFESALASGEGVLAPLTAAQIMNEWAALLLADRQYVKALALYNKAAVTVGSAGKDTKAVASAAYAGAGECLASMERYTEAATELKKSIGLKTKDSVEDSVTARLAFCLACSGSDADAKEALRLATAVLDRNVGSRAQALLARGLALESTGAMEDAAVDFLSIIDQSERQEGASVGGEDGGSCVDPELAAFAHYGLGRTLLWRGEFESAVVHLRRAVAETNREGLRMEALTLRADGLRGMGCLTEAEEDCAVVLGSKGGRVSRSLRALVTCILGDLSRADGKHPRALEHYGQSLQLERTARGLHGAATSQAYLMRTDGAMQDCNDLLASHAASPFATPARMLRGELCLLAFDHERAIEDITAAIEAGIEGRRHALEMRAAAHRLSGNYAAALKDYEGAHSMRRDAGEQDSRPTQGAVAGLGLCLAECNRHSEALEYLSRALSSLRGAPAEVDDGGLRLSGDGRPWVRAPVEKELLLARADCYIAANNFDAAIVDMDAAAGIRGNTSAVLATKLKAVRAKCSASMSECGRREVDSGNYSGGLALLRTASVLVDTPPALLCVYIARAILHTQPSSGGDLSEALKWCSRAIVSNPDVPTALAGLRVRIDIHVRMGSAAPVREDCTRLVKLLERASGKELTSIALRVADTCVFGGHPDLALQAVDTARQADTVRGKGQKQLRDLLRRIGDAFFAQSQLADATTAFKDSIDVEKSADAFAGLAHCFLRRRDRTKAQESAAAALKLRSTCVRAKAILSQVRLETGRSKDALVLLREADAEMSRSRGAKEGDAATVDAHVRLLVARCFSSALALAEETDEAETWVAEALRLSELLSGAAHGRSSAMSAVPDATNLVLLRGRLQLKSGKTADALANFQRAIELLDARRGSSGAEQPSSADEYQRAVQGRAKALNVLGRKEEALAAYDALLAGGSKGDVGALVTSAVVCERAMLLLTVRRDAKAAATEFQRVLGMSGSGGKTGESKAGSAGKPAKAVDAHVLAEAQAGYGMALSAMGNHTAAVEHIKAALSARPGLRSAALLLARARSCVALGDENEAMAYCTEAIGMAPSLELTQLKADIARIIEAKDAERLGWTSLKAGSFYEGIRCFDDALRLGLPDKSSALIGRSRCHAKLSSADSAAADVAASTTARPGDAKLRMDAVEVLLSIGRPREAIPHADMAVRLTKAQQSRPFVLRASIYEAAGDLEGALRDLSTVVRLDAKDVDSHVRRGDLLVKTGNVKLAEKSFQQALKLNPSHVGAKAGLAEISSDPTAARGAAAVSPAAAIGK* # ORIGINAL: g202.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 80608 81639 . + . ID=g202;Name=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 80608 81639 . + . ID=g202.t1;Parent=g202;Name=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 80608 80764 . + . ID=g202.t1.exon1;Parent=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 80608 80764 . + 0 ID=cds.g202.t1;Parent=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 81001 81189 . + . ID=g202.t1.exon2;Parent=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 81001 81189 . + 2 ID=cds.g202.t1;Parent=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 81371 81639 . + . ID=g202.t1.exon3;Parent=g202.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 81371 81639 . + 2 ID=cds.g202.t1;Parent=g202.t1 #PROT g202.t1 g202 MGLLRRDGSAVGATRCDTDTTLSKSKRKNSNNALVLSILYGLLCVTAIRVVQVPPPLDGLDSQTISVTVTCDGGSTDIVSLRVTNGDNVGAVLASAALDGATPSEVVFSGIELLQASYVVGSMHDRDGAFETHGGEYATILLAELISRDKLLLPNTTLTYIRNTTRCNPASAVRSAIELVQTRKANVFLGPACSSESKQVHVSE* # ORIGINAL: g187.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 11376 14598 . + . ID=g187;Name=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 11376 14598 . + . ID=g187.t1;Parent=g187;Name=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 11376 11492 . + . ID=g187.t1.exon1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 11376 11492 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 11718 13025 . + . ID=g187.t1.exon2;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 11718 13025 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 13250 13354 . + . ID=g187.t1.exon3;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 13250 13354 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 13590 13694 . + . ID=g187.t1.exon4;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 13590 13694 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 13969 14106 . + . ID=g187.t1.exon5;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 13969 14106 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 14294 14386 . + . ID=g187.t1.exon6;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 14294 14386 . + 0 ID=cds.g187.t1;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 14503 14598 . + . ID=g187.t1.exon7;Parent=g187.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 14503 14598 . + 0 ID=cds.g187.t1;Parent=g187.t1 #PROT g187.t1 g187 MANIGQRRRSAQSLALAEDDRPDAEKEAERRLRQLRTKLGDGAASPSGSISSPAGGRSPSTLPRPVGSVLDLKKTWVKLDTAIKRKRQLLQQLRSIDAAVPVWSSDQIGQLLQSAPFSKDLKVYADDDRLGEFNPALDKYSVNGKLELVLLQNAQLQQILMQTMYSQQQQQQQYQQPPHRQQQQQQQQQQQQQQQQQQYAQSQGYGQQEPQYLGQNGEGVRGGDAYGGYYGQDGNLQAGYYYDPYQGIYYYVDEAGQYYLVHDPDADVSGHFANTVSQLSLEAQNPAYYQQQQQQLQQQQQGQGKGAALNAKRPLPNIASAGDGGGGGDEGRFVSEQWDQAQHAHQHVDNTRAANLRRSQPLGAVDFPPRLRLRHYCLMSVFVVFLRRHAELSRAARMMKASEMGVAIDRCSGTIIEYFSKQNPILKVVAIATSEASEDFLVKEGLFSSQKKRQAAVEVVNESLSRVISCICGFMPSIANGPKNPDARLMIRMFTNKTAFPPHYIWKAEKDLLDFNRVYETRNVTFQHARLLLLDFVIVRVLLMQTLLDFGASPLYEDLRPTSRGENNIRVIASLVYRVTRGSILNEGVVMEFASETSKHFFDDNTMKHVYKNCASHIDDMQVRLREWANVFITELKNIALQIKNSGDQDGAV* # PASA_UPDATE: g192.t1, single gene model update, valid-1, status:[pasa:asmbl_8428,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 43932 45957 . + . ID=g192;Name=g192.t1 NODE_5_length_81936_cov_43.179 . mRNA 43932 45957 . + . ID=g192.t1;Parent=g192;Name=g192.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 43932 43938 . + . ID=g192.t1.utr5p1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . exon 43932 44172 . + . ID=g192.t1.exon1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . CDS 43939 44172 . + 0 ID=cds.g192.t1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . exon 44682 44742 . + . ID=g192.t1.exon2;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . CDS 44682 44742 . + 0 ID=cds.g192.t1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . exon 44844 44995 . + . ID=g192.t1.exon3;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . CDS 44844 44995 . + 2 ID=cds.g192.t1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . exon 45230 45355 . + . ID=g192.t1.exon4;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . CDS 45230 45355 . + 0 ID=cds.g192.t1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . exon 45509 45957 . + . ID=g192.t1.exon5;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . CDS 45509 45820 . + 0 ID=cds.g192.t1;Parent=g192.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 45821 45957 . + . ID=g192.t1.utr3p1;Parent=g192.t1 #PROT g192.t1 g192 MLRKAAPALRILYSGVRLHVEPCARTFTACPLNRAGGTSRLSTPIALVQSKHSSATMSDPVESAKKKAAFAAVDEYVKDKQVVGIGSGSTVVYAVERIAERVKAEGLSLVCIPTSFQANQLIVENGLVLGDLSRNPVIDVAIDGADEVDGALNCIKGGGGCQTQEKIVASNAKQFVIIADYRKNSAVLGEQWKKGVPIEVIPLAYVPLLRKLESMGGKPKLRMAVAKAGPVVTDNGNFVIDADFGLVKDPADLERKIKMIPGVVETGLFCNMAVKAFFGNQDGSVASRVAPSSS* # ORIGINAL: g196.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 57650 64055 . - . ID=g196;Name=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 57650 64055 . - . ID=g196.t1;Parent=g196;Name=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 63987 64055 . - . ID=g196.t1.exon1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 63987 64055 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 63533 63598 . - . ID=g196.t1.exon2;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 63533 63598 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 63370 63406 . - . ID=g196.t1.exon3;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 63370 63406 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 63133 63233 . - . ID=g196.t1.exon4;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 63133 63233 . - 2 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 62900 62971 . - . ID=g196.t1.exon5;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 62900 62971 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 62393 62676 . - . ID=g196.t1.exon6;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 62393 62676 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 61849 62202 . - . ID=g196.t1.exon7;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 61849 62202 . - 1 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 61542 61652 . - . ID=g196.t1.exon8;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 61542 61652 . - 1 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 61081 61258 . - . ID=g196.t1.exon9;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 61081 61258 . - 1 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 60717 60863 . - . ID=g196.t1.exon10;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 60717 60863 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 60231 60553 . - . ID=g196.t1.exon11;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 60231 60553 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 59703 60114 . - . ID=g196.t1.exon12;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 59703 60114 . - 1 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 59455 59544 . - . ID=g196.t1.exon13;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 59455 59544 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 58476 59264 . - . ID=g196.t1.exon14;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 58476 59264 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 58077 58337 . - . ID=g196.t1.exon15;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 58077 58337 . - 0 ID=cds.g196.t1;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 57650 57871 . - . ID=g196.t1.exon16;Parent=g196.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 57650 57871 . - 0 ID=cds.g196.t1;Parent=g196.t1 #PROT g196.t1 g196 MLKSLKAAVLGNAITREFELGKQKASVFLFEKKLVEKLDKKSKEQVFEMMRREATQLARLRHPLLLELMHPLDESTTDIAFATEPVFASLANALGCYENLGPPLPLALKEFALEEVEVQYGLFQLGKALAFLHDDAKLIHGNVNPESVFINERGDWKLGGFGHCVYAQYVSGDKTNFSFQEWDNKGALHSQPRLNYLAPEYVYDKSCCFRSDLFALGVLIYSAFQNGRPLFESSNNILTYRQAIDSLPFAQLGGVPHELAPIVRKLLAAAPELRMNASEFASLPYFDDVILLTLRYLDSLVEKEELKKAQFLKGLHRIIPKLSARVIRGRVLPQLLQELINNMMVPFVLPNIFLIAEGFSNDDFRRLVFPALIPVFQMKEPLQIMLTLMQNMQLLLSKASTEDVKNHVLPILHRALDSGSSQIQILCLNIIPSFSTTMDYGLMRNTILPRILQLCSAVDPVAVAVNALLCLSKSLEVADKWLVDEKVLPALEAVPSREPSVLMALLGVYDEICKHKKTQVDAQTIAVRVLPFLIPLSVESTINASQFEMFASVTSALLKRVEKEQLAKLRQMQQMDEQTRSLQKGHVPDGDISNMDDAELKRMEEMLARGDLERPRVRPEAAQSSQPSQQVYPAHMQQQPQHRNTAPAQQTPQPKVMVQVKERTPAAQNGLDIFTPQAAVPSRLAPPPATLAASVGAVAMQAQAQVSGATDGWSDLTEIQKLLEEMCPMDFAPLQPLSNASQSVPSSEKSAMDEMRQIVSAAAPKMAATVVASAVGFEPPTSAMKPAMQSLADAARTTTQPSVHHANPNPQQQTDGHPQQQQQRNQQQQQQQQQQQYSRSQASFAQSTPSHASLPSSAFHDAQTDASSEYGGWHGAESTEVTQPPTVTSWEGGAQRQASNQPQYQPPLQSHPPVQSYGQQPQQRLAQPAYAGMKSAIPQQHQQQQQTQQQQQRVPQQTATTAAYVGMQSMPPQQPQSSTQHRPVQQFQAPSGMPVAAAAQPGSLQLQGSVPRPQVQQQLQPQQPQLQQQQARPQQQQQVPSFAPNAQSHPQQNSLSASGYQPYSPSPVAPLLPGQQSYMQPQQQSQQGYGGYANPGSAYPPTAGLQSTGMYGPPLQTAQAAPQWQQTTPAQTMQPMNLQQQQPRQQQQQQQQQHAQPQQRKQAQSINDIFG* # ORIGINAL: g183.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 338 1692 . + . ID=g183;Name=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 338 1692 . + . ID=g183.t1;Parent=g183;Name=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 338 472 . + . ID=g183.t1.exon1;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 338 472 . + 0 ID=cds.g183.t1;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 626 797 . + . ID=g183.t1.exon2;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 626 797 . + 0 ID=cds.g183.t1;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 921 1297 . + . ID=g183.t1.exon3;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 921 1297 . + 2 ID=cds.g183.t1;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 1432 1692 . + . ID=g183.t1.exon4;Parent=g183.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 1432 1692 . + 0 ID=cds.g183.t1;Parent=g183.t1 #PROT g183.t1 g183 MPLRETPSSFESNAIGSSGDSMQLTHATDHQAISSKLEIASQRKKSQTTAQPRHAPWNEHIDARDVAETLRGDNAFHHRVGFGGIDTVQSHARRRRETLLRAQAHTFARQRSRSEGNHNGDSLNTLLESADSFESLVKQLALGSSANNEETKGIAISGTLAVRDAVLRAQSIGWFVGEDIARGTGEPQRHKHTTRTAHTHSPLHPGALEKSDPALLSLRLNEASARRKCILEASVAAAHAHVEHALQVAKETHARRDRERSMEVSRQRAHQERAERERLRRIAGRTLAAKTDIARVQRFGVSKPETETGIPVVC* # PASA_UPDATE: g186.t1, single gene model update, valid-1, status:[pasa:asmbl_8430,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 7962 10752 . + . ID=g186;Name=g186.t1 NODE_5_length_81936_cov_43.179 . mRNA 7962 10752 . + . ID=g186.t1;Parent=g186;Name=g186.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 7962 8153 . + . ID=g186.t1.utr5p1;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . exon 7962 8788 . + . ID=g186.t1.exon1;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . CDS 8154 8788 . + 0 ID=cds.g186.t1;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . exon 8967 9131 . + . ID=g186.t1.exon2;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . CDS 8967 9131 . + 1 ID=cds.g186.t1;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . exon 9346 9481 . + . ID=g186.t1.exon3;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . CDS 9346 9481 . + 1 ID=cds.g186.t1;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . exon 9610 10752 . + . ID=g186.t1.exon4;Parent=g186.t1 NODE_5_length_81936_cov_43.179 . CDS 9610 10752 . + 0 ID=cds.g186.t1;Parent=g186.t1 #PROT g186.t1 g186 MISALLALKETGTSFRSFSDRGLVSYDRTARYSSIGLRGFGGTIIPRTSALISKALEMELDLSNPTHGDCDADLSALSELCIPNNSSAELTDSSSPVDFNASGRSSISHEGSDYYSCEDSSAGTVSPAEHLSESSNFDGISGVEDEMAAVSVLCDSFETDQGVVDDDTGLRIAEEHPASAYLSPEQFARLDAVLERVCSIHGMARFPTIKAKLKMVIRLLRNELALRGVCLKDIRLCGGAAAHVVGGAAHDSYNDVDVIFNVDCPDGSEWLLFNMTREAVACVLAKMFPGDLNHGRIGMHTLEDAYVAKMFKMASNRGSETDDCWSLVTLRNMHGHSIDLKFVKRMRRECEFSIDSFQVSLSQALLDLPQVAPLPSAPAPVHRQTPLQCQQSRKEQQSVFFGDDAGAAATDLMASEQIRFGAFVPVTEDPSADTDDEFATSFPVASRQSGVYCDAARFMPVRVESVYYGNYHEALDHLRRRQIFYLNPQEVRGGGLLKYCHLLCRGYTFTPAAPVDAPLEEPTEQAVQQQQTQVEKYMFNRFCIDFSTAAEQHEAIVGYFYNHLGSNSQRNMWDPWLSMLATVVTRAGVDVRTIIRVINGMRTSLGLAPLVDETQWDRSAAGYSQSHHGHAHAQHGRGGSGKGKRSGGAHGTVTYHGGAYHQPYRNGGRSGRRGGRGFELAHTNQADLAAAR* # PASA_UPDATE: g185.t1, single gene model update, valid-1, status:[pasa:asmbl_8425,status:3], valid-1 NODE_5_length_81936_cov_43.179 . gene 5436 7232 . + . ID=g185;Name=g185.t1 NODE_5_length_81936_cov_43.179 . mRNA 5436 7232 . + . ID=g185.t1;Parent=g185;Name=g185.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 5436 5676 . + . ID=g185.t1.utr5p1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 5436 5836 . + . ID=g185.t1.exon1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 5677 5836 . + 0 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 5970 6072 . + . ID=g185.t1.exon2;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 5970 6072 . + 2 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 6211 6342 . + . ID=g185.t1.exon3;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 6211 6342 . + 1 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 6445 6531 . + . ID=g185.t1.exon4;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 6445 6531 . + 1 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 6628 6726 . + . ID=g185.t1.exon5;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 6628 6726 . + 1 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . exon 6893 7232 . + . ID=g185.t1.exon6;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . CDS 6893 6977 . + 1 ID=cds.g185.t1;Parent=g185.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 6978 7232 . + . ID=g185.t1.utr3p1;Parent=g185.t1 #PROT g185.t1 g185 MAGVGQAEMIPEMTYEEEVAEERNIRRFGVADGGIAQYDLRVVEPYKRVITHGGYDREGRAIIVFAANYLPKAGPECDYDSIMDHLFLYILEKMSKVVVKQYVIVYFHSGAASNVLPNVLWLRKCYQLIDRRYKKDIMHLFVVHPTFWVKATFNVLTPFISSKFARKLTYVDSLKSLSEHVPIDQFQIPEAALETESDPETMAKRRASFLRRVSTADEAEQ* # PASA_UPDATE: g195.t1, single gene model update, valid-1, status:[pasa:asmbl_8424,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 52992 56697 . - . ID=g195;Name=g195.t1 NODE_5_length_81936_cov_43.179 . mRNA 52992 56697 . - . ID=g195.t1;Parent=g195;Name=g195.t1 NODE_5_length_81936_cov_43.179 . exon 56588 56697 . - . ID=g195.t1.exon1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 56588 56697 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 56382 56488 . - . ID=g195.t1.exon2;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 56382 56488 . - 1 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 56097 56260 . - . ID=g195.t1.exon3;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 56097 56260 . - 2 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 55725 55797 . - . ID=g195.t1.exon4;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 55725 55797 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 55414 55528 . - . ID=g195.t1.exon5;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 55414 55528 . - 2 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 54831 55101 . - . ID=g195.t1.exon6;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 54831 55101 . - 1 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 54300 54551 . - . ID=g195.t1.exon7;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 54300 54551 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 53892 54026 . - . ID=g195.t1.exon8;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 53892 54026 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 53387 53542 . - . ID=g195.t1.exon9;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 53387 53542 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . exon 52992 53154 . - . ID=g195.t1.exon10;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . CDS 53122 53154 . - 0 ID=cds.g195.t1;Parent=g195.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 52992 53121 . - . ID=g195.t1.utr3p1;Parent=g195.t1 #PROT g195.t1 g195 MTGMELRPRRQSQSKDKDATPTASPAKVAPRSPAKREIVKTKFIARTSRLDTTHDSAIGASPFWGFYSLMGLAFVYFVFTNMTANYASRGILLDFTLLGSLSEDLVKLVVVVLAVCAMSFGAVGLAKIIVMDVLPGWAIFLLHHGLQATMIGTAILLALQQNFGVSQSMCLLMQTFVLFMKMHSFIQTNRDLMEIHKSKLRGEYVDSEDESTAAAAHSDDGASHGRKRSKSDPLIAPSGVQFPNNITLGNYLYYCCAPTLVYEMEYPRTERIRIGYILEKVLAFIACMGFMYTVMSQYVVPILQQSNQLSFYEAVSLLVVPLMSIHLMVFYVIFECVCNVAAEFTRFADREFYSDWWNSTTFDEYARKWNKPVHEFLLRHVYLESMVTYKASKIQATFATFFFSSLVHELLLAVSLRVIRPYLLIMQMFQLPLIFINRLFKGTVFGNIFFWFGLMTGPPILAVSYCREYYQ* # PASA_UPDATE: g197.t1, single gene model update, valid-1, status:[pasa:asmbl_8429,status:12], valid-1 NODE_5_length_81936_cov_43.179 . gene 64556 67998 . + . ID=g197;Name=g197.t1 NODE_5_length_81936_cov_43.179 . mRNA 64556 67998 . + . ID=g197.t1;Parent=g197;Name=g197.t1 NODE_5_length_81936_cov_43.179 . exon 64556 64683 . + . ID=g197.t1.exon1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 64556 64683 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 64849 64914 . + . ID=g197.t1.exon2;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 64849 64914 . + 1 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 65021 65144 . + . ID=g197.t1.exon3;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 65021 65144 . + 1 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 65311 65391 . + . ID=g197.t1.exon4;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 65311 65391 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 65598 65722 . + . ID=g197.t1.exon5;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 65598 65722 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 66095 66209 . + . ID=g197.t1.exon6;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 66095 66209 . + 1 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 66450 66562 . + . ID=g197.t1.exon7;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 66450 66562 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 66702 66843 . + . ID=g197.t1.exon8;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 66702 66843 . + 1 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 67148 67297 . + . ID=g197.t1.exon9;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 67148 67297 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 67431 67705 . + . ID=g197.t1.exon10;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 67431 67705 . + 0 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . exon 67864 67998 . + . ID=g197.t1.exon11;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . CDS 67864 67957 . + 1 ID=cds.g197.t1;Parent=g197.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 67958 67998 . + . ID=g197.t1.utr3p1;Parent=g197.t1 #PROT g197.t1 g197 MLNKVAFFIVRLICRILLSSFFSDVVVVGANNVPKWGPVIVLGNHPNYGVDGLLMGTMCPRMLHWWGKDMMFKNKIIGKMLRALGGVSVSRDRNVSNDALFKDSFKVLEEGGAIGLFPEGHSYTESKMLPVRTGAARLALGAAHQSTQKHFFVNVVPMGIVYVRKNAFRSQVLVQFGQPIYIDRDALATYDYAKDEKAAVVKLTSEVEDRLHSLTINADDFDTLQALHTARRLYKPSVGMTLHDYVSTTKRFVDGYPAASTDPDVNRLKGQLIEYQGILRGMNLTDSDVATCQDSPEEIKRLIGRSLVRLFVLIPLALPGIILHLPLYLAGLLIDMLVPRTEAKATVKISLILYCLPPVYTAAAYYGSAELSLGWLGFFLLLFVAFPLAAILHVNSLDSGSSVLRSATGALRCLRFNDEVKKLKAIREDLTKQVRVAVERYKPASKDSASTDESVGKNVRRRESFAEVFM* # ORIGINAL: g189.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 34274 38234 . - . ID=g189;Name=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 34274 38234 . - . ID=g189.t1;Parent=g189;Name=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 38199 38234 . - . ID=g189.t1.exon1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 38199 38234 . - 0 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 37789 38043 . - . ID=g189.t1.exon2;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 37789 38043 . - 0 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 37425 37506 . - . ID=g189.t1.exon3;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 37425 37506 . - 0 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 36415 36765 . - . ID=g189.t1.exon4;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 36415 36765 . - 2 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 36158 36289 . - . ID=g189.t1.exon5;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 36158 36289 . - 2 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 35787 35960 . - . ID=g189.t1.exon6;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 35787 35960 . - 2 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 35592 35636 . - . ID=g189.t1.exon7;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 35592 35636 . - 2 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 35292 35359 . - . ID=g189.t1.exon8;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 35292 35359 . - 2 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 34595 35133 . - . ID=g189.t1.exon9;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 34595 35133 . - 0 ID=cds.g189.t1;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 34274 34448 . - . ID=g189.t1.exon10;Parent=g189.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 34274 34448 . - 1 ID=cds.g189.t1;Parent=g189.t1 #PROT g189.t1 g189 MIGGNLVRLSLTSAHLRAVCRRLTTATSGGAPGKDSGSGSTKTAAVTRNASKTEGKRRSNHEDADEKPIVAQMEPIGVDVVAGKAYFWCTCGRSQKQPFCDASHKGTSFRGLKYVAEKDETVFFWDIVWSGNVFSGSCVPLQPKLLCITKRGIYLKRIHGKPSNGAQQDGVSPAGSVFTLHVPWACVISVTHTSGECLALSYIAASRKPQTEIVEITKPGNVHNVANVIRRHVFGEVAVSSEPAPKRRVLVILNPVSGTRQARAVLARKVLPIFRLAPHITIDVIETHSAGHAHSIAKGLDLTAHDCIACVGGDGILSEVVNGLMAHSDVEKAASIPLAIIPCGSGNGLATSLQIGVEGHTIPMDLFHITQAQRSMYAFLHISYGIISDVDFGSEGARWMGGIRFHLYGVLAILFPKRYPMRVSFTISRPPEAGSLGINGSIPSVLQNPSVRDAILHGSKQSQPGTSGNLQVGQCGGRLAEATHLPNGDVRFTVEGDFGWVHAANTKFFSADMGGGRFSSPSDGCADLSIIGGRHGRMANLRMMLAIEDGSHYLLPSCDAEYYKVASFSLETPPREAAVAVGGVGLINVDGEAFPGGETAHVTVVPSRLRILCSSGLA* # ORIGINAL: g199.t1 original gene structure, not modified by PASA NODE_5_length_81936_cov_43.179 AUGUSTUS gene 72707 75591 . - . ID=g199;Name=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS mRNA 72707 75591 . - . ID=g199.t1;Parent=g199;Name=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 75529 75591 . - . ID=g199.t1.exon1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 75529 75591 . - 0 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 75160 75225 . - . ID=g199.t1.exon2;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 75160 75225 . - 0 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 74915 74990 . - . ID=g199.t1.exon3;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 74915 74990 . - 0 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 74461 74615 . - . ID=g199.t1.exon4;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 74461 74615 . - 2 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 74086 74236 . - . ID=g199.t1.exon5;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 74086 74236 . - 0 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 73374 73600 . - . ID=g199.t1.exon6;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 73374 73600 . - 2 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 72971 73112 . - . ID=g199.t1.exon7;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 72971 73112 . - 0 ID=cds.g199.t1;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS exon 72707 72843 . - . ID=g199.t1.exon8;Parent=g199.t1 NODE_5_length_81936_cov_43.179 AUGUSTUS CDS 72707 72843 . - 2 ID=cds.g199.t1;Parent=g199.t1 #PROT g199.t1 g199 MRMNVNQKIALELATLALSQVRKDEARKQGRRILDRLGAKNVTINEYESIIAADIIDPADVDVAWENIGGLDGTISALKELVVLPFKRPDLFLNGSKLLHPPTGVLLYGPPGCGKTMLAKAVAKDCGCAFINLRIGSIVEKWYGESQKLVAAVFSLAEKLAPSIIFVDEIDAFLRQRQSSDHEATAMIKSQFMSLWDGLASTSAGRVIVLGATNRPFDVDKAILRRMPQTFPIALPTKDQRKRILQVILSAENLEEEFDFDLLAEMTEGYSGSDLHELCRNAAMCALRDFMGAGNADNDSVTGFRPMTMADFQASRIKNTVGGNASSSHELFDIGDSP* # PASA_UPDATE: g191.t1, single gene model update, valid-1, status:[pasa:asmbl_8427,status:3], valid-1 NODE_5_length_81936_cov_43.179 . gene 41502 43414 . + . ID=g191;Name=g191.t1 NODE_5_length_81936_cov_43.179 . mRNA 41502 43414 . + . ID=g191.t1;Parent=g191;Name=g191.t1 NODE_5_length_81936_cov_43.179 . five_prime_UTR 41502 41650 . + . ID=g191.t1.utr5p1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . exon 41502 41774 . + . ID=g191.t1.exon1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . CDS 41651 41774 . + 0 ID=cds.g191.t1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . exon 41864 41936 . + . ID=g191.t1.exon2;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . CDS 41864 41936 . + 2 ID=cds.g191.t1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . exon 42056 42181 . + . ID=g191.t1.exon3;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . CDS 42056 42181 . + 1 ID=cds.g191.t1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . exon 42370 42482 . + . ID=g191.t1.exon4;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . CDS 42370 42482 . + 1 ID=cds.g191.t1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . exon 42684 43414 . + . ID=g191.t1.exon5;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . CDS 42684 42802 . + 2 ID=cds.g191.t1;Parent=g191.t1 NODE_5_length_81936_cov_43.179 . three_prime_UTR 42803 43414 . + . ID=g191.t1.utr3p1;Parent=g191.t1 #PROT g191.t1 g191 MADAHIQAAATSAVRQSLIERGCMACGLKTLTKIAAIITSIALAIGGIFTIISLSIKCIFIGLYMLLLAIIVMLIEAPIIFRWNEKLNKLSSKLNDARPWKKASMYFFFMIWIWFCIGVTSIIAAVLMIVTGMLYVFQSVGPRDATPPDERPRARGQSTADKERLMSGGGSLDTLDEHGATASV* # PASA_UPDATE: g10463.t1, single gene model update, valid-1, status:[pasa:asmbl_4433,status:12], valid-1 NODE_2495_length_6067_cov_37.6137 . gene 163 5943 . - . ID=g10463;Name=g10463.t1 NODE_2495_length_6067_cov_37.6137 . mRNA 163 5943 . - . ID=g10463.t1;Parent=g10463;Name=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 5598 5943 . - . ID=g10463.t1.exon1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 5598 5943 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 5313 5379 . - . ID=g10463.t1.exon2;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 5313 5379 . - 2 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 4982 5051 . - . ID=g10463.t1.exon3;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 4982 5051 . - 1 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 4561 4707 . - . ID=g10463.t1.exon4;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 4561 4707 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 4283 4318 . - . ID=g10463.t1.exon5;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 4283 4318 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 4011 4103 . - . ID=g10463.t1.exon6;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 4011 4103 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 3770 3852 . - . ID=g10463.t1.exon7;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 3770 3852 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 3331 3641 . - . ID=g10463.t1.exon8;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 3331 3641 . - 1 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 2450 2689 . - . ID=g10463.t1.exon9;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 2450 2689 . - 2 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 1927 2062 . - . ID=g10463.t1.exon10;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 1927 2062 . - 2 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 1250 1680 . - . ID=g10463.t1.exon11;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 1250 1680 . - 1 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 839 942 . - . ID=g10463.t1.exon12;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 839 942 . - 2 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 447 493 . - . ID=g10463.t1.exon13;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 447 493 . - 0 ID=cds.g10463.t1;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . exon 163 227 . - . ID=g10463.t1.exon14;Parent=g10463.t1 NODE_2495_length_6067_cov_37.6137 . CDS 163 227 . - 1 ID=cds.g10463.t1;Parent=g10463.t1;3_prime_partial=true #PROT g10463.t1 g10463 MVFIAGKLPTHSTQPVFTEPSQGAAAEDGAHVTDPLSASLRDGGSLSNSDAGTFSNKASSVVPMPDHEPFPVQRLKLMCILKVARALKSSHGPLRTNIPDSLAEPLLRASLSEDADVRLLVQSIFQVLLRCEFSAVTKIQPADQTELAAETPAALAHLLKKVYWSLFEHSVAPGNSAAHYVTIQRTFAVIVKGLGYGELVQAVRIALALQKYALESSSLPKEAADGVHALSASLISLCGTLSHNARLEDLAKTVNASRKVADAPIGIANVHFDETPRFADGSATADAIQKKPSVIVTVDDVNIDVISNGGRPSGVPHSPTPDRKIDDANDEDASGRAALSSEETDCIFTVSGLAEALLSDAVIRKRYPEVASLLRQPYKHEVVLWPLSFDINGDRAGLFVIHNGQMVLQNGTYTFVFKEIGTISKAASASSATILLTESIVYAGGSNEAPNTKRPLDYIEPSSQGIGGFALYSRVKKQREVDAANAWNVSFDEVDFKEVLGRGSFGVVRRAIWRGTVVAVKELHFHNPNPSADTGINTVAVLASVRQIETPLDAARVATDSRDKKLSLSGSGGKGSGTAVGGSVSGDSSGRAATSSRKTSLGRLRTLASKNSAHTSAKSKSSAGAVMDIKEEARVMAGLRHPNIVMFMGACFKEPHCFFLCEFMSRGSLKDVYQTKGFTIDAKLRLSMMLDSARGMAYLHSSGLIHKDLKSPNVLIDNHFNAKIG # PASA_UPDATE: g9394.t1, single gene model update, valid-1, status:[pasa:asmbl_6581,status:12], valid-1 NODE_3805_length_2715_cov_42.1678 . gene 128 2135 . - . ID=g9394;Name=g9394.t1 NODE_3805_length_2715_cov_42.1678 . mRNA 128 2135 . - . ID=g9394.t1;Parent=g9394;Name=g9394.t1 NODE_3805_length_2715_cov_42.1678 . exon 1603 2135 . - . ID=g9394.t1.exon1;Parent=g9394.t1 NODE_3805_length_2715_cov_42.1678 . CDS 1603 2135 . - 0 ID=cds.g9394.t1;Parent=g9394.t1;5_prime_partial=true NODE_3805_length_2715_cov_42.1678 . exon 128 1468 . - . ID=g9394.t1.exon2;Parent=g9394.t1 NODE_3805_length_2715_cov_42.1678 . CDS 490 1468 . - 1 ID=cds.g9394.t1;Parent=g9394.t1 NODE_3805_length_2715_cov_42.1678 . three_prime_UTR 128 489 . - . ID=g9394.t1.utr3p1;Parent=g9394.t1 #PROT g9394.t1 g9394 VTEIFDEFSSFCGREELVPRTVCHFEFHECPDAELTGDHRDQPQPRVRVSIEFEKEASTKPAIDSNQTQLTPTPTPTPTPTALHSECISMALGIAASAVEALLKSQVQPCGNGRLTDFNGRAHPFFKVIECGECPTPELLRAIAFTCNLSTWKFIRDQPSAPASRSADIDGSNFGRVTCGPEELGLAINITRSFLSITVPKCSVGEVLGKDKVNLVRTLKDLALTAASPINVEPVTRDPDTLDSDHTFIIDCACIRIALKEPAPSIDVVRTAAMRLLFCALKYLVKQNHKSIYNREDDDHYVTFSLPFDAIGTVVGKHYARINELQDRHKAIVFVNDKETTCVDRRTLYIVNLHDRRDIEEVRKQIYRAVDLWERNIIKAAEARQKEEARNQRRDVVRYPRERSDFRPETIAPGQKAKPSTKGPVSVGRAGNHDRNNDYDDYGDYDDDDDEYDRAYKDFCNRDDGGDGYVEEDTGAKNYNSDDQDADAGPADRAVVIAGHHLH* # PASA_UPDATE: g3302.t1, single gene model update, valid-1, status:[pasa:asmbl_9923,status:12], valid-1 NODE_902_length_16035_cov_38.1749 . gene 306 1438 . + . ID=g3302;Name=g3302.t1 NODE_902_length_16035_cov_38.1749 . mRNA 306 1438 . + . ID=g3302.t1;Parent=g3302;Name=g3302.t1 NODE_902_length_16035_cov_38.1749 . exon 306 415 . + . ID=g3302.t1.exon1;Parent=g3302.t1 NODE_902_length_16035_cov_38.1749 . CDS 306 415 . + 0 ID=cds.g3302.t1;Parent=g3302.t1;5_prime_partial=true NODE_902_length_16035_cov_38.1749 . exon 736 851 . + . ID=g3302.t1.exon2;Parent=g3302.t1 NODE_902_length_16035_cov_38.1749 . CDS 736 851 . + 1 ID=cds.g3302.t1;Parent=g3302.t1 NODE_902_length_16035_cov_38.1749 . exon 1109 1438 . + . ID=g3302.t1.exon3;Parent=g3302.t1 NODE_902_length_16035_cov_38.1749 . CDS 1109 1185 . + 2 ID=cds.g3302.t1;Parent=g3302.t1 NODE_902_length_16035_cov_38.1749 . three_prime_UTR 1186 1438 . + . ID=g3302.t1.utr3p1;Parent=g3302.t1 #PROT g3302.t1 g3302 AAYELRSHRLRAGAVPQWKASFAELLEGGEYPAIGAWMNDFGSGHTVHELLQYPSLDHRRSLLDRLGANTAHRTLQARLADLVQETHSKHLSPLPFSPLR* # ORIGINAL: g3303.t1 original gene structure, not modified by PASA NODE_902_length_16035_cov_38.1749 AUGUSTUS gene 2010 5601 . - . ID=g3303;Name=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS mRNA 2010 5601 . - . ID=g3303.t1;Parent=g3303;Name=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 5504 5601 . - . ID=g3303.t1.exon1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 5504 5601 . - 0 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 5071 5191 . - . ID=g3303.t1.exon2;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 5071 5191 . - 1 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 4535 4685 . - . ID=g3303.t1.exon3;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 4535 4685 . - 0 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 4190 4273 . - . ID=g3303.t1.exon4;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 4190 4273 . - 2 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 3736 3863 . - . ID=g3303.t1.exon5;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 3736 3863 . - 2 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 3369 3483 . - . ID=g3303.t1.exon6;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 3369 3483 . - 0 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 2174 3018 . - . ID=g3303.t1.exon7;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 2174 3018 . - 2 ID=cds.g3303.t1;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 2010 2072 . - . ID=g3303.t1.exon8;Parent=g3303.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 2010 2072 . - 0 ID=cds.g3303.t1;Parent=g3303.t1 #PROT g3303.t1 g3303 MASSVSARESPTTSPILAHRHVKSILSEFVATPTTRPSDRSKDANGDARGNAHLSTCRPWDSADYHTRLDSFKIFMWFAKPGKISPAECARFGWKNTGVDRLECVTCRAELAFPPDVNAVTPEGHGAVLDFHERLNAAHSDICPWRDNASSESFADPCPPTAEEAKSQFVSRAQSILAGVQYIPEVLREIVVTLEASMESPLADLVRLCDMSPSKKTLRACALAACGWERPSASGDDAPNSVTCRMCGRMLGLWNFRGSDDVEEEASDVVGVTHVTATDAPTDAQSAAPLPEKESGSAAAFDGALPSDGAVAVAGASDAAAGGACGGGEPGGDALASDPPPGDKDGEKDGDPVSMFLSFPSDIVGEGSRGAPDGGAGGDASVTPNPTSQGGDGAAIPTAAAVATTPVRAHKRPLEESENSEESAAKRRDVDEDDPLSTPAATRSAHAATAPAVVAVTPARAPRGSPIRTHFGVNPVTEHRWACPWVAEWKKVARDVALVRLLPRAQQGTGEASRLKDAVRTAQRTLAMSTSTLY* # PASA_UPDATE: g3304.t1, single gene model update, valid-1, status:[pasa:asmbl_9924,status:3], valid-1 NODE_902_length_16035_cov_38.1749 . gene 7048 9264 . - . ID=g3304;Name=g3304.t1 NODE_902_length_16035_cov_38.1749 . mRNA 7048 9264 . - . ID=g3304.t1;Parent=g3304;Name=g3304.t1 NODE_902_length_16035_cov_38.1749 . five_prime_UTR 9072 9264 . - . ID=g3304.t1.utr5p1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 9034 9264 . - . ID=g3304.t1.exon1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 9034 9071 . - 0 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 8860 8922 . - . ID=g3304.t1.exon2;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 8860 8922 . - 1 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 8545 8570 . - . ID=g3304.t1.exon3;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 8545 8570 . - 1 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 8201 8326 . - . ID=g3304.t1.exon4;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 8201 8326 . - 2 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 7782 7887 . - . ID=g3304.t1.exon5;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 7782 7887 . - 2 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . exon 7048 7418 . - . ID=g3304.t1.exon6;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . CDS 7337 7418 . - 1 ID=cds.g3304.t1;Parent=g3304.t1 NODE_902_length_16035_cov_38.1749 . three_prime_UTR 7048 7336 . - . ID=g3304.t1.utr3p1;Parent=g3304.t1 #PROT g3304.t1 g3304 MSRASKILGGFKLNWMNLRDADSGRVLWQSDEDMSDPAAEHEARVPKKILKCKCVSREINFTSKELMEKFHLIQRVYFKGKCIEEWFFEFGFVIPGSTNTWQSIIEAAPESQMMPATVLSGNVIIETSFYDDELLVSQSKVRIYYV* # ORIGINAL: g3305.t1 original gene structure, not modified by PASA NODE_902_length_16035_cov_38.1749 AUGUSTUS gene 9718 15815 . - . ID=g3305;Name=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS mRNA 9718 15815 . - . ID=g3305.t1;Parent=g3305;Name=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 15704 15815 . - . ID=g3305.t1.exon1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 15704 15815 . - 0 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 15229 15415 . - . ID=g3305.t1.exon2;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 15229 15415 . - 2 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 14751 14862 . - . ID=g3305.t1.exon3;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 14751 14862 . - 1 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 14391 14488 . - . ID=g3305.t1.exon4;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 14391 14488 . - 0 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 13878 14050 . - . ID=g3305.t1.exon5;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 13878 14050 . - 1 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 13360 13456 . - . ID=g3305.t1.exon6;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 13360 13456 . - 2 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 12895 13101 . - . ID=g3305.t1.exon7;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 12895 13101 . - 1 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 12110 12636 . - . ID=g3305.t1.exon8;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 12110 12636 . - 1 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 11900 11966 . - . ID=g3305.t1.exon9;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 11900 11966 . - 2 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 11501 11621 . - . ID=g3305.t1.exon10;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 11501 11621 . - 1 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 11102 11206 . - . ID=g3305.t1.exon11;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 11102 11206 . - 0 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 10698 10878 . - . ID=g3305.t1.exon12;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 10698 10878 . - 0 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 10190 10314 . - . ID=g3305.t1.exon13;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 10190 10314 . - 2 ID=cds.g3305.t1;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS exon 9718 9918 . - . ID=g3305.t1.exon14;Parent=g3305.t1 NODE_902_length_16035_cov_38.1749 AUGUSTUS CDS 9718 9918 . - 0 ID=cds.g3305.t1;Parent=g3305.t1 #PROT g3305.t1 g3305 MLEKPPAKGQIDDRCVGWPALQSKLLRELIFASKHLNEPNTTVKYVSYLLYRMHEHLNASEQEDLSLLLDSLTTKQSASASVGQLAFARMPHVVSLVPSGGPPHLAPIKRSLTRSRKVSVTRSPFIYSPFAPKTKQQEVITWVQDDVVEVTAVVSNPMAFELCIERMTLSTSGVPFQPYPTSLVLPPRTFSRQVSLFGKPMAAGVLTIRGCIVRTFGVDSEHMLLPKEMKVIEPLPCMAVEQLPSDTTRATQLNLCEGEGFECRITLVNVGVIPVQHVTIKHDVIGEGVTPARALTQFQWDADLIEKSLPLLPGARLTFPLYITALFDSGGTFSFEYGCDDVQDFCRATDLKISLKVARTIQFAGFDIQDVPVDADFRRSISATAAPPKQGLEPSAELEKRLRAGSISARLVADSVRAEAKRASNAARRGSSMDANDADGANSAAVAAAAAAAAAAVARASKQELCVGNVLDNAGDDGACLLLFDAINESSYSFNLKFTVNCPAEYAGGEAKTWVHKLILDAQSVRRIFLPVSRFNLPEELFNTPYEEDPTKQYVRSNPKSKANPEAERQENRRAWYASKLRDMIKVEWHLISALSPLTRVRSRGALALDRLSLSSAMLARLMKDTVRFSLSASDATTGKPLSSAVPLHTFVTVTATITNATDSPMGPLLVSLQPYQDLENGRHDGHVDGRMAWVGSLESVIAEVQPHTSSSHTVEVVLLAEGSFKIACSSRLAHGATCAAAVGSVDDQVHWSPSPLVLHAFAGNADGHN* # PASA_UPDATE: g14487.t1, single gene model update, valid-1, status:[pasa:asmbl_2234,status:12], valid-1 NODE_1649_length_10002_cov_55.8176 . gene 9108 9928 . - . ID=g14487;Name=g14487.t1 NODE_1649_length_10002_cov_55.8176 . mRNA 9108 9928 . - . ID=g14487.t1;Parent=g14487;Name=g14487.t1 NODE_1649_length_10002_cov_55.8176 . five_prime_UTR 9846 9928 . - . ID=g14487.t1.utr5p1;Parent=g14487.t1 NODE_1649_length_10002_cov_55.8176 . exon 9108 9928 . - . ID=g14487.t1.exon1;Parent=g14487.t1 NODE_1649_length_10002_cov_55.8176 . CDS 9315 9845 . - 0 ID=cds.g14487.t1;Parent=g14487.t1 NODE_1649_length_10002_cov_55.8176 . three_prime_UTR 9108 9314 . - . ID=g14487.t1.utr3p1;Parent=g14487.t1 #PROT g14487.t1 g14487 MYPLWPFTSYDSWLICNRDKAAWTYTASIAALTAGSSNLLKFDSLMSIFQKSILVNMLKDKELRSKVPEGSYEAWIRARLTNAQVAPNTVFTLLREGTRMIAGLLRSASLGIRLDCFDPPSNGATGMKAACQTSTATNGNYVRLSTRTATAQQLADDIHNSLIVFEANPAIQPMAP* # ORIGINAL: g14483.t1 original gene structure, not modified by PASA NODE_1649_length_10002_cov_55.8176 AUGUSTUS gene 246 1674 . + . ID=g14483;Name=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS mRNA 246 1674 . + . ID=g14483.t1;Parent=g14483;Name=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 246 324 . + . ID=g14483.t1.exon1;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 246 324 . + 1 ID=cds.g14483.t1;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 732 832 . + . ID=g14483.t1.exon2;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 732 832 . + 0 ID=cds.g14483.t1;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 1195 1297 . + . ID=g14483.t1.exon3;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 1195 1297 . + 1 ID=cds.g14483.t1;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 1537 1674 . + . ID=g14483.t1.exon4;Parent=g14483.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 1537 1674 . + 0 ID=cds.g14483.t1;Parent=g14483.t1 #PROT g14483.t1 g14483 TGEKGIGKAGKPLHFKNSGFHRVISGFMAQGGDFTRGNGTGGESIYGARFDDENFKLKHTERGLLSMANAGPNTNGSQFFILFKETPWLDGKHVVFGRIVDNQAILDRMESLGTRGGQPTQTIEIVDCGEVKADAPKAA* # ORIGINAL: g14486.t1 original gene structure, not modified by PASA NODE_1649_length_10002_cov_55.8176 AUGUSTUS gene 8138 8578 . + . ID=g14486;Name=g14486.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS mRNA 8138 8578 . + . ID=g14486.t1;Parent=g14486;Name=g14486.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 8138 8578 . + . ID=g14486.t1.exon1;Parent=g14486.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 8138 8578 . + 0 ID=cds.g14486.t1;Parent=g14486.t1 #PROT g14486.t1 g14486 MSRGHILIVEGIHLYTVGHVRELIDARFILRTPPDVCGRRRRTKDYGAICDPPEYFERVVLPQALAHDARLREEGVVLHDIDGGRLMSVSDVQSLSLVTAEGIECAQPGRADSHVTRREVCWVPTDVTQLSQTILHRIAPLSSHGK* # ORIGINAL: g14485.t1 original gene structure, not modified by PASA NODE_1649_length_10002_cov_55.8176 AUGUSTUS gene 5091 5798 . - . ID=g14485;Name=g14485.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS mRNA 5091 5798 . - . ID=g14485.t1;Parent=g14485;Name=g14485.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS exon 5091 5798 . - . ID=g14485.t1.exon1;Parent=g14485.t1 NODE_1649_length_10002_cov_55.8176 AUGUSTUS CDS 5091 5798 . - 0 ID=cds.g14485.t1;Parent=g14485.t1 #PROT g14485.t1 g14485 MSSSSHTFTHTCGPSLPLLIAAGVGAYTLLRYAVSAAKSLRDRALCERDWARHQGEWVVVTGASEAVGRDVALELGRRGLSIVAVGHNTRRLQALAADIAALDSGAHARVVVCAAQPASAAQCIVSDAQHAGVYRKDILSAMSGEDAQCDNCGAVHAAPAGDCYRANGVRCCRHMHTDIASSCSSLPQYCSSQQPATTRNAAPSRHSRVHAPLDPCACMHGDSKAESSADEYGKI* # PASA_UPDATE: g14484.t1, single gene model update, valid-1, status:[pasa:asmbl_2231,status:12],[pasa:asmbl_2232,status:12], valid-1 NODE_1649_length_10002_cov_55.8176 . gene 2210 4453 . - . ID=g14484;Name=g14484.t1 NODE_1649_length_10002_cov_55.8176 . mRNA 2210 4453 . - . ID=g14484.t1;Parent=g14484;Name=g14484.t1 NODE_1649_length_10002_cov_55.8176 . exon 4383 4453 . - . ID=g14484.t1.exon1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . CDS 4383 4453 . - 0 ID=cds.g14484.t1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . exon 3956 4077 . - . ID=g14484.t1.exon2;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . CDS 3956 4077 . - 1 ID=cds.g14484.t1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . exon 3371 3525 . - . ID=g14484.t1.exon3;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . CDS 3371 3525 . - 2 ID=cds.g14484.t1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . exon 2921 3086 . - . ID=g14484.t1.exon4;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . CDS 2921 3086 . - 0 ID=cds.g14484.t1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . exon 2210 2695 . - . ID=g14484.t1.exon5;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . CDS 2322 2695 . - 2 ID=cds.g14484.t1;Parent=g14484.t1 NODE_1649_length_10002_cov_55.8176 . three_prime_UTR 2210 2321 . - . ID=g14484.t1.utr3p1;Parent=g14484.t1 #PROT g14484.t1 g14484 MASLGWGALPIALCVITGASFITTYAIAVGKGDVKAFFPYISDTGSEPPESCIFSLCLNVSGWIALLVMYLRFKQIDVTAQGLTLAESGLMRRRNRRSLAAGCLSVAGLILVANFQDTAVLEVHMIGAVSVFFFGGVYEILNAQLSRSLGHTVDARAQVISLVLTYIGMAATVAGAGAAYFLKGKDLDTMAEIQKWPSSDRGYAAHVTSTAGEWLMGVSFLAFFLSYVRTFKSISLTVDVGSGCARGNNECTNVAAGDSAFGAVTNAKDGKPRSSSFVVASSGAEPHEGTPLFGR* # ORIGINAL: g8829.t1 original gene structure, not modified by PASA NODE_1360_length_11772_cov_42.6726 AUGUSTUS gene 5135 6697 . - . ID=g8829;Name=g8829.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS mRNA 5135 6697 . - . ID=g8829.t1;Parent=g8829;Name=g8829.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 5135 6697 . - . ID=g8829.t1.exon1;Parent=g8829.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 5135 6697 . - 0 ID=cds.g8829.t1;Parent=g8829.t1 #PROT g8829.t1 g8829 MATRSSVSFLSLPIEVIVCHFVRFLSNKDLASIAGVNSRLHYVLKHVRVYTLRTGIAKQYYGSATFRNAVWADIPRERLGLNLYGITDVSTLGGIHSLRLSDCDRLTDVSALGGVHSLELSQCKGVTDVSALGGVHSLNLSRCYGVTDVSALGGVHSLDLSHCDALTDVSALGGVHSLNLSHCYGVTDVSALGGVHSLDLSHCHGVTDVSALGGVHSLNLSDCEGVTHVSALEGVHSLDLSQCKGVTDVSALGSVHSLVLFRCNGVTDLSALGGVHSLNLSCCEGVTDVSALGGVHSLDLSRCYEVTDVSALGGVHSLNLCFCKGVTDVSALGGVHSLNLFECKGVTDVSALGGVHSLDLSRCYGVTDVSALGGVHSLNLFFCIGVTDVSALGGVHSLDLRFCNGVVDVSTMGGVYSLDLRGCNGVTDVSALRGVHSLDLSECKGVTDVSALGGVHSLVLSRCYEVTDVSALGGVHSLDLRGCKRVTDVSALGGVHSLNLQGCKRVTDVSALGGVHLLKL* # PASA_UPDATE: g8830.t1, single gene model update, valid-1, status:[pasa:asmbl_1328,status:3], valid-1 NODE_1360_length_11772_cov_42.6726 . gene 7041 9397 . + . ID=g8830;Name=g8830.t1 NODE_1360_length_11772_cov_42.6726 . mRNA 7041 9397 . + . ID=g8830.t1;Parent=g8830;Name=g8830.t1 NODE_1360_length_11772_cov_42.6726 . five_prime_UTR 7041 7128 . + . ID=g8830.t1.utr5p1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . exon 7041 7190 . + . ID=g8830.t1.exon1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . CDS 7129 7190 . + 0 ID=cds.g8830.t1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . exon 7466 7519 . + . ID=g8830.t1.exon2;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . CDS 7466 7519 . + 1 ID=cds.g8830.t1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . exon 7953 8317 . + . ID=g8830.t1.exon3;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . CDS 7953 8317 . + 1 ID=cds.g8830.t1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . exon 8676 9397 . + . ID=g8830.t1.exon4;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . CDS 8676 9202 . + 2 ID=cds.g8830.t1;Parent=g8830.t1 NODE_1360_length_11772_cov_42.6726 . three_prime_UTR 9203 9397 . + . ID=g8830.t1.utr3p1;Parent=g8830.t1 #PROT g8830.t1 g8830 MSKANSDMAVLLDMGFPQVRVEKALAKTFHSGLQPAMDWLLQHSEDPDIDVPLSASAGAAVGAASTGDGATAPQDTEMADASAAASEGGHAMSLMCQDCGKRLRSDVEAQAHAARTGHANFAESTEEIKPLTPEEKAAQLALLQKKMEEKRKIREEKEKEELLEKEKLRRNQGKELSMLRARAQDDDVKKLADLKRREKIEEREAKERVKRMIEQDRLDRLAKSGKAATPTDAPAAQAAPAQPTTTPSQPQPQKTYTEARVQVRLTNGATITRSFAAEDTLFQVCEWVSDARTDGQAPFALMTTFPRRVYGRDDMSLTLKEAKLVPSVSLVLTRP* # ORIGINAL: g8832.t1 original gene structure, not modified by PASA NODE_1360_length_11772_cov_42.6726 AUGUSTUS gene 10636 11552 . + . ID=g8832;Name=g8832.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS mRNA 10636 11552 . + . ID=g8832.t1;Parent=g8832;Name=g8832.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 10636 11279 . + . ID=g8832.t1.exon1;Parent=g8832.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 10636 11279 . + 0 ID=cds.g8832.t1;Parent=g8832.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 11462 11552 . + . ID=g8832.t1.exon2;Parent=g8832.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 11462 11552 . + 1 ID=cds.g8832.t1;Parent=g8832.t1 #PROT g8832.t1 g8832 MFDLLLPHAQPVCDWTESRGPKGTVLTREIQLLHEDGPLMFSVFLRRGLKFQATTQAVVYSKYNATEWVQVGTMSTLCGSVFVTYPTVPRNPLLGVRVEVAGGMPLSENDAAGVGTLDTEVREFERMLQQSGFSLQSIQTDFLRVRPLYGDVHRTLDEAHRKITKLERLRLMRPSANDPLFTSLAPMKPWLQREFLDWVTSGGSLPESVRNHRRSLGERLEEVFDSFSVEDARRVKEDFQRKCKE # ORIGINAL: g8827.t1 original gene structure, not modified by PASA NODE_1360_length_11772_cov_42.6726 AUGUSTUS gene 316 790 . - . ID=g8827;Name=g8827.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS mRNA 316 790 . - . ID=g8827.t1;Parent=g8827;Name=g8827.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 316 790 . - . ID=g8827.t1.exon1;Parent=g8827.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 316 790 . - 0 ID=cds.g8827.t1;Parent=g8827.t1 #PROT g8827.t1 g8827 MLSIRSSLAGLRGCNIAALAPVIARTYSATSSSSSSPTTPACDPLLLSPLNHHAIARAGILTVEANKTVYEMVRKLAENKVGSLLVTDDDNVVGVVTERDYIRKISLMGRRAFDTTVRDIMTSNPACVSPQCNIDDVIRSMIQVGSRHLPLVAGANGK # ORIGINAL: g8828.t1 original gene structure, not modified by PASA NODE_1360_length_11772_cov_42.6726 AUGUSTUS gene 1292 4045 . + . ID=g8828;Name=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS mRNA 1292 4045 . + . ID=g8828.t1;Parent=g8828;Name=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 1292 1722 . + . ID=g8828.t1.exon1;Parent=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 1292 1722 . + 0 ID=cds.g8828.t1;Parent=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 1907 2001 . + . ID=g8828.t1.exon2;Parent=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 1907 2001 . + 1 ID=cds.g8828.t1;Parent=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 2283 4045 . + . ID=g8828.t1.exon3;Parent=g8828.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 2283 4045 . + 2 ID=cds.g8828.t1;Parent=g8828.t1 #PROT g8828.t1 g8828 MDALAAPGHGTPRTSPSKNATPTESLHRHPHAKRKRGVDGDSSDEHQMSPTAKAQRMANLDADANLHPNGKKSTKTKSARSPPEAVYQKKEKQHKIVDKYENADEFEDDNEVFEVDRLLWKRRDGGHYQYLVRWKGYTQCDDTWEPSTNLLCPEKVKIFERVWRLTPKATRNRMMSFGECDIYSADAIAARKAAKQSTPAPTPATTVTSFRIKTEDDRTGHVGMRTTTPRSGSRGGHASSICSAATPDDVKGSDGRSRSRVVKSEPHSIERTKESSLGCRVGGSGDLGVSVSADRASARSDNRVDEDDNGGHVADARPQQNETAEAILLSMLDVEEISRRRNEAVDEQARLAAQIELLDRALELRRSRDDALHMSTAQRQNQVAGNEQAANNRRKSRLERLHMEAETEKKKEKEKVLALGARRPSVGVVEPLDFNGGGDYGDNGADYDGGDNGANYDGGDNGAASERAVDGVEERTVAADQNDGGLAQRPRRQAAIASLKKSSTPGTAREKRAPPLTSSSSHTGAESRYVGTTRAVAQKELPGEEIALKKGTASHHVTGPRTDLAGKLPYDPSRLVWDEHHVINTADQYCYCGGPRVEGAMELYCSECKNWFHGDHCAFMVDFVLLRYACNYRFTCAMCNKTSPWCESFDWRPAKLSEGILTAMALMGHSKRSVERMDDRAPKYVWSFTANEIAAVLTEIAQPLFGCSTFTATSTFVKSVSIELARAEGRLYHRMVRVDNRVRKNCFALFIDRRAICPQIRM* # ORIGINAL: g8831.t1 original gene structure, not modified by PASA NODE_1360_length_11772_cov_42.6726 AUGUSTUS gene 9493 10191 . - . ID=g8831;Name=g8831.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS mRNA 9493 10191 . - . ID=g8831.t1;Parent=g8831;Name=g8831.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS exon 9493 10191 . - . ID=g8831.t1.exon1;Parent=g8831.t1 NODE_1360_length_11772_cov_42.6726 AUGUSTUS CDS 9493 10191 . - 0 ID=cds.g8831.t1;Parent=g8831.t1 #PROT g8831.t1 g8831 MAARIPSPSPRSSITSCTFLLLLYVSLASVAATDELSFFTTTTFARVVPYSDRISTNASLAFKANDTGNVNATSVACVSLLVGQYRCAEPIIDPHTQSAAGCTPQSTVAVPCYAVVNTTCDGTVQNGSAVAFYALAPCRYTSGYDYSTTLLISIFFGFLGVDRFYLGYPAIGLLKLCTLGFFMFGYVIDVILILLQIVGPADGSAYIVPFYGPRLVHIEADANTAYKPDYFR* # ORIGINAL: g7998.t1 original gene structure, not modified by PASA NODE_2297_length_6815_cov_43.882 AUGUSTUS gene 536 3737 . + . ID=g7998;Name=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS mRNA 536 3737 . + . ID=g7998.t1;Parent=g7998;Name=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 536 642 . + . ID=g7998.t1.exon1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 536 642 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 822 924 . + . ID=g7998.t1.exon2;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 822 924 . + 1 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 1108 1234 . + . ID=g7998.t1.exon3;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 1108 1234 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 1389 1490 . + . ID=g7998.t1.exon4;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 1389 1490 . + 2 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 1686 1750 . + . ID=g7998.t1.exon5;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 1686 1750 . + 2 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 1904 2005 . + . ID=g7998.t1.exon6;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 1904 2005 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 2181 2377 . + . ID=g7998.t1.exon7;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 2181 2377 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 2603 2762 . + . ID=g7998.t1.exon8;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 2603 2762 . + 1 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 2985 3130 . + . ID=g7998.t1.exon9;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 2985 3130 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 3305 3461 . + . ID=g7998.t1.exon10;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 3305 3461 . + 1 ID=cds.g7998.t1;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 3657 3737 . + . ID=g7998.t1.exon11;Parent=g7998.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 3657 3737 . + 0 ID=cds.g7998.t1;Parent=g7998.t1 #PROT g7998.t1 g7998 MASMDQVSRRLSFRPDAEMTEEIRAMEKFNKTPFSKLAEEMVSQGYNYVQLEEEVQDENKMSDTFLQQTKEHFSRLKFNYVELNTKCTFLERLARNDNVDAVCPGKEETDALAQMVAADKQKVRALKETNDNLRETIVALAGEVNEGQHKLSTKSVRVAELADTVASMTAQYEDLKDRQPIFSGPGGEAVTLADVQAYVNEMKAQLAQIERQKAAVDGEAKALEEEKERLNVENVRMREEHADVSAQLSSVRSSKHASSARLEEMCDWYRDLTSLVAEMSGVRIVECESAQKLVVALTDIATTDILVSLAYDDNGNLTGVEVTPAVVGIDDIVQHAVARRLHAAFVLREIKTRIQCHLERASELDILMAKFPMDWPSQGAKVVAQFGRGRYVIAMDAEYPLPHAEARLDGASNSPVTLADLKERGLRAGAKTVEDWLSIIQQSIGESR* # PASA_UPDATE: g7999.t1, single gene model update, valid-1, status:[pasa:asmbl_3964,status:12], valid-1 NODE_2297_length_6815_cov_43.882 . gene 4098 5353 . - . ID=g7999;Name=g7999.t1 NODE_2297_length_6815_cov_43.882 . mRNA 4098 5353 . - . ID=g7999.t1;Parent=g7999;Name=g7999.t1 NODE_2297_length_6815_cov_43.882 . five_prime_UTR 5298 5353 . - . ID=g7999.t1.utr5p1;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . exon 5216 5353 . - . ID=g7999.t1.exon1;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . CDS 5216 5297 . - 0 ID=cds.g7999.t1;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . exon 4787 4887 . - . ID=g7999.t1.exon2;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . CDS 4787 4887 . - 2 ID=cds.g7999.t1;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . exon 4098 4572 . - . ID=g7999.t1.exon3;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . CDS 4402 4572 . - 0 ID=cds.g7999.t1;Parent=g7999.t1 NODE_2297_length_6815_cov_43.882 . three_prime_UTR 4098 4401 . - . ID=g7999.t1.utr3p1;Parent=g7999.t1 #PROT g7999.t1 g7999 MSNQSQGIQALLQAEKSAADTVTKARKQKTLRLKQAKDEAESEIAKFKAERESQFRTYLDQHAGTSDTLAVKLKQETVLKIATVEKNIAANKEAVINRLLEAVCDVKPQLHVNVRAS* # ORIGINAL: g8000.t1 original gene structure, not modified by PASA NODE_2297_length_6815_cov_43.882 AUGUSTUS gene 5867 6741 . + . ID=g8000;Name=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS mRNA 5867 6741 . + . ID=g8000.t1;Parent=g8000;Name=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 5867 6046 . + . ID=g8000.t1.exon1;Parent=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 5867 6046 . + 0 ID=cds.g8000.t1;Parent=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 6299 6399 . + . ID=g8000.t1.exon2;Parent=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 6299 6399 . + 0 ID=cds.g8000.t1;Parent=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS exon 6513 6741 . + . ID=g8000.t1.exon3;Parent=g8000.t1 NODE_2297_length_6815_cov_43.882 AUGUSTUS CDS 6513 6741 . + 1 ID=cds.g8000.t1;Parent=g8000.t1 #PROT g8000.t1 g8000 MDGDPRKGKGMGPPAPLPQRGSLLDMASILQQRSGLGDAAPPRLVRKGSNVESILKRDSQSSLALVKGRPFAGSVGMLTRNNSKSGIRVVHEPKRDAKAPSPVNNSASIASLVDAFDTSSIQDVAGSRAEVRTAGGRGSSSGRSDFDIVTRLTSQGPVEKMSAERSTEQ* # PASA_UPDATE: g7611.t1, single gene model update, valid-1, status:[pasa:asmbl_6607,status:3], valid-1 NODE_381_length_25325_cov_52.0345 . gene 2342 4392 . + . ID=g7611;Name=g7611.t1 NODE_381_length_25325_cov_52.0345 . mRNA 2342 4392 . + . ID=g7611.t1;Parent=g7611;Name=g7611.t1 NODE_381_length_25325_cov_52.0345 . five_prime_UTR 2342 2413 . + . ID=g7611.t1.utr5p1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 2342 2497 . + . ID=g7611.t1.exon1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 2414 2497 . + 0 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 2832 2946 . + . ID=g7611.t1.exon2;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 2832 2946 . + 0 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 3218 3271 . + . ID=g7611.t1.exon3;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 3218 3271 . + 2 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 3415 3572 . + . ID=g7611.t1.exon4;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 3415 3572 . + 2 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 3762 3840 . + . ID=g7611.t1.exon5;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 3762 3840 . + 0 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 3989 4093 . + . ID=g7611.t1.exon6;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 3989 4093 . + 2 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . exon 4241 4392 . + . ID=g7611.t1.exon7;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . CDS 4241 4287 . + 2 ID=cds.g7611.t1;Parent=g7611.t1 NODE_381_length_25325_cov_52.0345 . three_prime_UTR 4288 4392 . + . ID=g7611.t1.utr3p1;Parent=g7611.t1 #PROT g7611.t1 g7611 MPPPPPKPVSKPGKVQAYKASFDYKAMQPDELSFSEGDILYVFDKSDPGWWRAKCGDREGLVPSNYIAENAVEMDNPMHEAAKRGNLSFLIECLGAKVSSNGLDKAGSTPLHWAANGGHLDCVQKLLEQPGVAVNVQNKLGDTPLHGASWKGHPEVVALLLAKGADPNIKNSEGQTPLKLSRNPEVGRLLQQHAQSFAAAAADYGGAEDEDSD* # PASA_UPDATE: g7613.t1, single gene model update, valid-1, status:[pasa:asmbl_6608,status:12], valid-1 NODE_381_length_25325_cov_52.0345 . gene 23693 25195 . + . ID=g7613;Name=g7613.t1 NODE_381_length_25325_cov_52.0345 . mRNA 23693 25195 . + . ID=g7613.t1;Parent=g7613;Name=g7613.t1 NODE_381_length_25325_cov_52.0345 . exon 23693 24583 . + . ID=g7613.t1.exon1;Parent=g7613.t1 NODE_381_length_25325_cov_52.0345 . CDS 23693 24583 . + 0 ID=cds.g7613.t1;Parent=g7613.t1 NODE_381_length_25325_cov_52.0345 . exon 24892 25195 . + . ID=g7613.t1.exon2;Parent=g7613.t1 NODE_381_length_25325_cov_52.0345 . CDS 24892 25195 . + 0 ID=cds.g7613.t1;Parent=g7613.t1;3_prime_partial=true #PROT g7613.t1 g7613 MDVDPPDDAFARDLLASVDFGAYDRMPGEKLPITPVHLARNGSDKITPSSSPSLLPGIVLSSALKDEQKKKAAAPPNRSSRPVMLRSQMKQQLELQMIQQQESQGRARTVSGGSGSSLGSSHDIDAELLKRQQQQQQLEQLLAAQAAMAEHLAKAAQQQQQQQQQQQQQLQQQQQQQQQQQQQQQQHQSPQSTGLLFPTNYHLKQKYRQVLPQVAEAPVAVSSPQASKSELFFPTNYHIQQKQQQQLAELIYPLLAAKAGDASAAGLNPEGLLRDPQLQLMLQQHAAALGIHSHVPPIKAEPMDDDHESMKDILDGFLSASVDDDSSVDGNSVTNLSLDDSNPFAPASLPEFMNFGFDSGMNGLSGGISSSMPAGNGFPAGGVPYSRSRKKKDNHNAS # ORIGINAL: g7612.t1 original gene structure, not modified by PASA NODE_381_length_25325_cov_52.0345 AUGUSTUS gene 6817 22114 . + . ID=g7612;Name=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS mRNA 6817 22114 . + . ID=g7612.t1;Parent=g7612;Name=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 6817 6961 . + . ID=g7612.t1.exon1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 6817 6961 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 7182 7310 . + . ID=g7612.t1.exon2;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 7182 7310 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 7975 8087 . + . ID=g7612.t1.exon3;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 7975 8087 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 8311 8443 . + . ID=g7612.t1.exon4;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 8311 8443 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 8855 9233 . + . ID=g7612.t1.exon5;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 8855 9233 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 9415 10463 . + . ID=g7612.t1.exon6;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 9415 10463 . + 1 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 10676 10755 . + . ID=g7612.t1.exon7;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 10676 10755 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 10967 11150 . + . ID=g7612.t1.exon8;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 10967 11150 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 11308 11658 . + . ID=g7612.t1.exon9;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 11308 11658 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 11826 12009 . + . ID=g7612.t1.exon10;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 11826 12009 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 12247 13858 . + . ID=g7612.t1.exon11;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 12247 13858 . + 1 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 14147 14377 . + . ID=g7612.t1.exon12;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 14147 14377 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 14537 15241 . + . ID=g7612.t1.exon13;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 14537 15241 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 15416 15705 . + . ID=g7612.t1.exon14;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 15416 15705 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 15924 16267 . + . ID=g7612.t1.exon15;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 15924 16267 . + 1 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 16531 17241 . + . ID=g7612.t1.exon16;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 16531 17241 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 17522 17708 . + . ID=g7612.t1.exon17;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 17522 17708 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 17835 18796 . + . ID=g7612.t1.exon18;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 17835 18796 . + 1 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 18937 19644 . + . ID=g7612.t1.exon19;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 18937 19644 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 19940 20431 . + . ID=g7612.t1.exon20;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 19940 20431 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 20592 20902 . + . ID=g7612.t1.exon21;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 20592 20902 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 20982 21612 . + . ID=g7612.t1.exon22;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 20982 21612 . + 0 ID=cds.g7612.t1;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS exon 21849 22114 . + . ID=g7612.t1.exon23;Parent=g7612.t1 NODE_381_length_25325_cov_52.0345 AUGUSTUS CDS 21849 22114 . + 2 ID=cds.g7612.t1;Parent=g7612.t1 #PROT g7612.t1 g7612 MTPPADVNECNGGACQPRGPAACVNTAGSFYCTCQTGYELAGSRVDCIDVDECARGIAQCQANSYCVNTIGSYNCPCNNGYSGDGRTGGCYDFAFPIPVASVKLTVDGTVESPPANQWLSFDPAKVSSPGNNGAADDQRSRVTPRPFYATPSSKSATETIVTVGFDLLRVKDRVYTSCTVTALAGSSSYTFQYATPNDLRTFSKASYTIDISMRTMIGSIQNVGPLAVSVEISCVSNSLTDTPAQRTLPGQRTFRISQFTFYFLSKYPTLLRAHPIVLERFYSALPAGNLVYFKVDGFDQLATAPCPAVAPVMGVPRSSVCTKPGSSTADDLYSTCFPMLEYRVKEDCGSTTIDLVNPTATCNQRVGVNIKNNCRYAMEIRVSNPALQLQTVMWTVFSIDTTPPTLIPALDVKIMGPWFLNPGDNTTPEPRTLFQNTGSRVAGSWLNLYKEDAHLLLPAVNPSADGAYLVDTLNSALVPVTANSQVKEFIYAIGVCRYGISRLGAADPCWQTPISATAAGGESFAQDASLQTAATYYINVAASNFAGLTSRSASPPRTIDTRAPMASDLAIQPLLLDRQTGRLVSRTFQPSLKDMVVTLLARDYPGETGVARASYSIVAVDGRDAIAPITGEAVQMKSAPYGVTCDSIGDTAIVFAVFKLSEGSGETITGRWDTEEIVFRIDSSKPTTWQPSVERGAFLSLYGDIDSIATNRALPGSSANPGFAVSVWTRSVPDGGSSKPNCIWRLAFDSGVSMRVCLDTTAATVSVQNGDGSVTAATARLPVGVWTQVVVSYDQTAARVSVWARVNGVPKSVGVGGFDLRGAKMVTSLLFGEGSLSMWKMYRTALSNDDIATQESVVLFTFAGTFLDDGPMGGSGGLTNGLVEPNRTPTFAPDRFGAASQAVTFSGSQYVKIFDSIDIPLQDFSVGTWFRGPVDQQVPNSCIAAIGAVGKPGDTCSVVLVVRPVYIDGVEHHSDVAHRLQCIAPNGTMISVEASASVDQTGGAWKHTWVVRRGTKLESYFEGVQVASVDIPDGLLRSRVLASVGSRIGGCIGDTVGSFKGDVDDMTVYRKAILATEVAALNARHYCADGVYQLPLSTNAALQDATLPARLHRREFQVSVTVSDATLRSTVVGPLRFIMDYTPPVASMVRDGQGAADADYVSLLTFGANWDAWTDLDSGIVQYEYAVGTVCAKADTAGVVWRFTGTARRVGGAGLVVPITPVDNVKYYFTVRGTNGAGVVSYGCSNGAVMKYAPPTITNLRVLHSWLSEARLGAPATQWYSGDLEGLNATWDATDDSGMAGYVVSLSRVDGVFFTSDLLPRPFFGYPSRFENGDLVSVSLAATNLAGLSRVVDFTVLFDETPPTISTPLSVARPPGFRTTSGALELGVQFGFSDTEQPIPSVVVAVSTSRYLKDAAFPAMYLSVAVSPAYFVSGLGSLTDGRTYTLIARAYNQGGNYTDALLPFLFDASPPIIGAIHEAEGPDSLTTDISFQTDATQIVVFLGNSHDPHDKQLTFSALLFEDDAVISNMADVIPLVNDAGQLYLLLSGLALAEQKTYRVNVTVVNSNGGAVSAGTNGVQLFSVPASSNVVVRIVGDSTGPDGTAYQRSPSFVRATIDAANSLLVRHHEWALIPEGAEAIEPLYTRLDSLNRPTVLTIVLTTPLTAGIRYMLSVRTYYLYDAGEYFTDTVSQNVLVQDGTPPPLGTVVGSYLWLEEGRRALVAVTVSGFEDPESGVGVNGSAWHLSSRPDGTMALSDWQGIDRGTGAMNASVLLVHKVVPSTPLFAALRMCNRVSLCTYAFVELVINVPAERRPLVVDVLGPDWKTLKTDPDIDFSSSSTSFFAGLVNFGTRARGASWILATSDFGVEDVVVTGTLPDSGAGDWVRADGLALHHGRHYYVCVNYGAARECSDGAVIDLQSPRPRAIFDGTVFGDDESFQRTTDFAAVTWEHFGGVGSYSVGDDSSLRAGIAYYEWALGTFPGATDVFDFDRLGLVTSAIKGGRALVPGQRYFSTIRATSRVGKVSVASSDGFVVDPTPPVATGSAAAVVVRYGSEATGNKGSEAVVRWGGIDDPESGIATFHVAMGTQFGHVDVAGPMLVPAGEFSLVLSDLPLRDGHPYYVSVRATNHAGLEATFASPVAVFDSSIPQPGTVSAGAVSVEAGGVRRVFATFTVTATWDHFRDPHSGIARYEWAIGSRAGDGDIMTFRSIGRNTTAQHAGLHMADGDVLFVTVRAFNGLGLAIDAYAPTIVVDRSPPLVGRIVNGFDGLDRHWQATRTLYAIWSGFHDAHSGIARYEISAGTAAMATDVLAWTDVGLTTSHAIRYAAAITGSRYFINLRATNPRGLVTGASSRGIIVDLTHPDVTGSVSVQHPTGEVGASFTTDTGITGTYINSRTAVALDWTGVFSDAESGILRFMWHIEDMRGVAMRTAIPDDGNVGSGATRDLAVGLSLGEGIYKAVVSAQNGAGLWSRASAHFAVDATPPARETVRVAVIEGRRTVEWQQFVDVLPGHLTYGDLVTYSLALGTCYDCDDVRALSLVQQGTPGLSVINGVLYRFVLDASAPATVYATIVARNAAGLSTASHSTLPPAVPACADAGSSLVVQVVSNLPRVAGYQPHTDSLLLRWAYTGTDSVVRYRYTVGAASAGDITGGDVFSNLWTPFELNTDQFADAGRQTTAVVTSLGMQDSRTYGGYVQAVLSTGACVVASSSAVTIDRTKPNYVSTDFLRDGELPTGQDRMYQIDDTSLSAAWLDASFKDRNVVGVVAYECAAGVTRYGSQVAAFTKSAVSASGAGGLVCRFTQMSLVPGKAYYVSVRATDRMGLFTTVTTNGVIVDTSAPSAGIVLDGKGSVDADFTSDTTQLSVNWHDFVELESGIISYELFITLAGNDGTVDVTQAIANANTGMAISWTVGSLSLATGESYVATVRATNAVGLSTTAQSDGITVDTTAPLVAAGVAITIPNNGGFLADPTTVAASWTGLFSDAESGIERYEWAIGTVAYGQQIMLYATTHTDTSATGMELSISHASVIYVTVAAYNAAGLVSLVTSAPVRVDLTAPIFASRVAAMMYRDGVAAGFVRVNASWDVADDESLLRDCAWAIGEHAKLSLCCRNIGRYGCLLYCPDTRALPNGAWQVEGSSAVQSFVSVGIAARSAISGLVRVSNTAAYNVFVSLRCVNNVGLVSESFSRAVRIGALDKGITMEAQIYSKRGLEADGSTLFQSSLTTMYASWKVANDPFGTATRFECTVREGASVGASVIASHSGPETGVVFSDLALKDGRRYDVLVASFADDGTTQLATATASVTVDVVAPKCDPLRVLYSSATTTFTVAWKCVDDKSAVARYDLSVGSALGFDDVVRENYDTTTTMTFRRALGSDPLWFALIVQDLAGNRAQVTARYPPA* # PASA_UPDATE: g7610.t1, single gene model update, valid-1, status:[pasa:asmbl_6609,status:12],[pasa:asmbl_6610,status:12], valid-1 NODE_381_length_25325_cov_52.0345 . gene 133 1864 . - . ID=g7610;Name=g7610.t1 NODE_381_length_25325_cov_52.0345 . mRNA 133 1864 . - . ID=g7610.t1;Parent=g7610;Name=g7610.t1 NODE_381_length_25325_cov_52.0345 . five_prime_UTR 1733 1864 . - . ID=g7610.t1.utr5p1;Parent=g7610.t1 NODE_381_length_25325_cov_52.0345 . exon 692 1864 . - . ID=g7610.t1.exon1;Parent=g7610.t1 NODE_381_length_25325_cov_52.0345 . CDS 692 1732 . - 0 ID=cds.g7610.t1;Parent=g7610.t1 NODE_381_length_25325_cov_52.0345 . exon 133 351 . - . ID=g7610.t1.exon2;Parent=g7610.t1 NODE_381_length_25325_cov_52.0345 . CDS 133 351 . - 0 ID=cds.g7610.t1;Parent=g7610.t1 #PROT g7610.t1 g7610 MESTELPRVADECQRPTNHRSAAHVDVADLVAQLTSARTTADEALALEELLCAFGDDGCAVPEELAWASLPTPVVSVCQLLRHQVALDLFVCYVFERRFGWSEWKLNAALGGNATLALQRDSSGQPITSAGDLHPPRTPEPCPLSPLSPPSKKDGADSLLQLVPPRMDASGARTKRRLNDLLDRCVAYLRAQAPEAPLLVAFEHCITEVAAKPVVRNQTYVHLMEWFRQCGQSEDLRVAMSANAAVVERLVVQGLTDVWSAIRSGCMSRVGGVLDVMDLTQLERFYSALVAICMGPGSTWQAKEGALMGITAVVRKFAWTTWEGTAAQPSAANADAAPTQGPKYLLKFGRLHLDGLPPFISNRIRGVVYSLLAHPQLSIREHATKAFSAYLSRSEFRARIFRHFCLVFAGAIVRPQCFV* # ORIGINAL: g1389.t1 original gene structure, not modified by PASA NODE_4051_length_2280_cov_44.9977 AUGUSTUS gene 1 608 . - . ID=g1389;Name=g1389.t1 NODE_4051_length_2280_cov_44.9977 AUGUSTUS mRNA 1 608 . - . ID=g1389.t1;Parent=g1389;Name=g1389.t1 NODE_4051_length_2280_cov_44.9977 AUGUSTUS exon 1 608 . - . ID=g1389.t1.exon1;Parent=g1389.t1 NODE_4051_length_2280_cov_44.9977 AUGUSTUS CDS 1 608 . - 0 ID=cds.g1389.t1;Parent=g1389.t1 #PROT g1389.t1 g1389 MYRCLGLGRASRTAWRWNVGVLAAFAIILFTAVIPNVKRDTDPNTARLELENISGLHPRRDLGKDDTPSSLSHGDNTELDVAGGPDGERDDETNSEDELVGETDVTNETDRTDVTDETDVTDETVETEEKEKEEPEDAMATEADGVAPAPARDIPSVQIDDAVKPPPGTQPLAACNVKRHRLGYLNDDAMWETTANGRIPRS # ORIGINAL: g6035.t1 original gene structure, not modified by PASA NODE_2425_length_6337_cov_35.5752 AUGUSTUS gene 4451 5404 . + . ID=g6035;Name=g6035.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS mRNA 4451 5404 . + . ID=g6035.t1;Parent=g6035;Name=g6035.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 4451 5404 . + . ID=g6035.t1.exon1;Parent=g6035.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 4451 5404 . + 0 ID=cds.g6035.t1;Parent=g6035.t1 #PROT g6035.t1 g6035 MLRAAVASSSFLRRRPTVHLGAIVPSVAPCTQRALHAAAVLYGIKPGRILMPSMSPTMMEGNLKHWLKKEGDSVKAGEVLLEIETDKASIEVEASEDAIIAKIIVPEGAQKIPVNAVIALTVEEGQDPKQIDIPADLQKGSSTPPPAPQSATTAPVTPKADTARMASAAAAGQGAHGAHLPEGIFLSPAVRAAVLKHGVDVLKIKGSGKKGRILKGDVLAFVEAGGAARTTIPVPAVTPPVKPVAVSGRSASDNGASSPIPGEGAYVDHPHTNVRKVIAARLSESKATIPHSYVDIECRLDTLLALRKRLAGEERVL* # ORIGINAL: g6034.t1 original gene structure, not modified by PASA NODE_2425_length_6337_cov_35.5752 AUGUSTUS gene 178 3795 . - . ID=g6034;Name=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS mRNA 178 3795 . - . ID=g6034.t1;Parent=g6034;Name=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 3754 3795 . - . ID=g6034.t1.exon1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 3754 3795 . - 0 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 3273 3366 . - . ID=g6034.t1.exon2;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 3273 3366 . - 0 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 1786 3001 . - . ID=g6034.t1.exon3;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 1786 3001 . - 2 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 1370 1503 . - . ID=g6034.t1.exon4;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 1370 1503 . - 1 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 994 1163 . - . ID=g6034.t1.exon5;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 994 1163 . - 2 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 527 681 . - . ID=g6034.t1.exon6;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 527 681 . - 0 ID=cds.g6034.t1;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS exon 178 282 . - . ID=g6034.t1.exon7;Parent=g6034.t1 NODE_2425_length_6337_cov_35.5752 AUGUSTUS CDS 178 282 . - 1 ID=cds.g6034.t1;Parent=g6034.t1 #PROT g6034.t1 g6034 MAANAARRPKAVQQIFNDVEKARTDENWALVPDLLQRYSRLAPESAYFDVVHVDMYLEEYRRSSAKDAKLLERCVEHSAKALAAPADDVSPDEANILAAQLKYRSGSHSDALESLTKINLYGIVDSMDASAGRIVRLALDALALKGLISERMALAPAECVRPYEHVISATTTLFPNGTTSQTVRRAVDLAHQRIPAIFSKSRDLGRCVEALRRTLLAGTTYVSESTVSRARQSLSKVLLSASTEDNYLSTPSRPAPPKSPKSHSRSASLGTSKSAQQMSGNAPTLGLPTGSLAGAAPTDGRAVSNDEIEESVLLLLLEESEALGSAVASIADRDVLSRFTSDITSIYDRLTIALARRSQFAACAEALDRSMRFSFECPYVWLQFGQALEANGEHKRAAMVFKQLCASKEGSGNILAHLYAAKIYLVSLNEPDTALELASAALELAQAERKRTASREGLDPSKVNVAGWPSPSNSAHLTARAAEYVGMSHARLASVARLEERRRSHLRQAIDNLHQAFALDPVCPRIAYHLALQYAHIREIGLAVAHVKKALEADRSFIPALHLLALLMSARRHDDVALRILDSALELSPGHMCIMALRAKLQERFESPAIALGTYRTMLKLWRDDPLMQEASSSRLLQ # PASA_UPDATE: g2804.t1, single gene model update, valid-1, status:[pasa:asmbl_7273,status:12], valid-1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . gene 15 1500 . - . ID=g2804;Name=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . mRNA 15 1500 . - . ID=g2804.t1;Parent=g2804;Name=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . five_prime_UTR 1486 1500 . - . ID=g2804.t1.utr5p1;Parent=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . exon 1035 1500 . - . ID=g2804.t1.exon1;Parent=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . CDS 1035 1485 . - 0 ID=cds.g2804.t1;Parent=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . exon 15 824 . - . ID=g2804.t1.exon2;Parent=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . CDS 493 824 . - 2 ID=cds.g2804.t1;Parent=g2804.t1 NODE_4390_length_1680_cov_35.1894_potentialcontaminant . three_prime_UTR 15 492 . - . ID=g2804.t1.utr3p1;Parent=g2804.t1 #PROT g2804.t1 g2804 MGTCELNIITRAAQTTCNFVSSHTSGWAIAKVGANMAGPLSGKLVIGGAVGFISDPSGLDVDGGYAFLAYVDVEGLATGQASRVVRVQAFGIASAANSVDSISVYRDPESGEGVVYASATVDRRRLASGNWTQHSLVVQTLPAGDVWITCDASAFPSGADGWANCYIPTTSESTGTCLEYCLQAVCGQESDKIDNGIRTSVILGVALGMSIGGVVVAAALVITWRKRKRRLAEQSQHHDIVKGDSGSITADHAETDPLLA* # ORIGINAL: g6155.t1 original gene structure, not modified by PASA NODE_421_length_24115_cov_31.138 AUGUSTUS gene 14135 14476 . - . ID=g6155;Name=g6155.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS mRNA 14135 14476 . - . ID=g6155.t1;Parent=g6155;Name=g6155.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 14135 14476 . - . ID=g6155.t1.exon1;Parent=g6155.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 14135 14476 . - 0 ID=cds.g6155.t1;Parent=g6155.t1 #PROT g6155.t1 g6155 MELVEPQGQQKLVYECLGAPDDERKGFIQTKLQEAFARLYPSLPSTASLPQHMNCCAISTPRAAASHPQCPKRATLHELAEEYDYYGFDYDLPQTEKQILRTSFITLANKLAQ* # PASA_UPDATE: g6156.t1, single gene model update, valid-1, status:[pasa:asmbl_7112,status:3], valid-1 NODE_421_length_24115_cov_31.138 . gene 17860 21062 . + . ID=g6156;Name=g6156.t1 NODE_421_length_24115_cov_31.138 . mRNA 17860 21062 . + . ID=g6156.t1;Parent=g6156;Name=g6156.t1 NODE_421_length_24115_cov_31.138 . five_prime_UTR 17860 18020 . + . ID=g6156.t1.utr5p1;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . exon 17860 18794 . + . ID=g6156.t1.exon1;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . CDS 18021 18794 . + 0 ID=cds.g6156.t1;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . exon 19020 20569 . + . ID=g6156.t1.exon2;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . CDS 19020 20569 . + 0 ID=cds.g6156.t1;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . exon 20838 21062 . + . ID=g6156.t1.exon3;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . CDS 20838 21000 . + 1 ID=cds.g6156.t1;Parent=g6156.t1 NODE_421_length_24115_cov_31.138 . three_prime_UTR 21001 21062 . + . ID=g6156.t1.utr3p1;Parent=g6156.t1 #PROT g6156.t1 g6156 MGKSATAGAASSANGHGPATSNGSRSTANGSHVTPNGKGHATDPADITPLRRFRVGKEKIAGIFDRLKSVLCDAQSFVGRASKALVDDDLIREQKEVSAFQSQVTGLAELLMRDNMKVVFVGQTSNGKSTVINAMLHDRILPSGIGHTTNCFISVEGTDSDIPFVISRTPEGVEEKRTIEYVSTLADATHPDGKGNTNDLLRVCWPKSKCSLLEEDVVLMDSPGLDIDADFDEWIDSHCSDADVFVLVANCESILRRSESNFLVKVNEKFSKPNVFIVQNRWDAADNEPEASARIKQQHVEYAGKLLVEKLQVLRKDEINDRVFFVSAKEMLQLRKSKQAPPSQGNAPGDRASEFTRFERTFEECISRSALKTRFEHRVVRGLHVAHSLSEAMGRVADLIAAEKGKAEEAARSRKSELDDMRGKSGTCVRECETVITTLIERLRADFGSAMEEEIEWGLPRIVRDFDGCMFRPQSPDGLATYKKMLTEHVADMLRGNMDRKCRSRFGEEYGKSRNRIAELARSLLPGGVPHSARDVLLMRKDSVFEELFPPTPSSPSGDLLHISLEMNCGALSEGFREDIRFRFSLGWSVIGPKLLGPNLYQLVSVVFPSTLDDSEDSDVVSSSTENDHAGTGSTDGAHISSASNRQGSPPATPVPRSSVVAVAAAALAPTAQNIDRFAGALSSPPAYAALTVCATLLARPFLWKIVFAGAACVGGLYAWERVTYTNRAKERKYKEQYVGFVTKRLRSTLAETGGNVCGTIRRDLSYSLEGLKNRVSRTDERLEADIARYERDLAGMAELSSDAKEVHEKCIAIATDLAKFQDAFIQQ* # ORIGINAL: g6154.t1 original gene structure, not modified by PASA NODE_421_length_24115_cov_31.138 AUGUSTUS gene 8797 11666 . + . ID=g6154;Name=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS mRNA 8797 11666 . + . ID=g6154.t1;Parent=g6154;Name=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 8797 8991 . + . ID=g6154.t1.exon1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 8797 8991 . + 0 ID=cds.g6154.t1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 9180 9223 . + . ID=g6154.t1.exon2;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 9180 9223 . + 0 ID=cds.g6154.t1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 9476 9687 . + . ID=g6154.t1.exon3;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 9476 9687 . + 1 ID=cds.g6154.t1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 9793 9965 . + . ID=g6154.t1.exon4;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 9793 9965 . + 2 ID=cds.g6154.t1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 10107 10230 . + . ID=g6154.t1.exon5;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 10107 10230 . + 0 ID=cds.g6154.t1;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS exon 10342 11666 . + . ID=g6154.t1.exon6;Parent=g6154.t1 NODE_421_length_24115_cov_31.138 AUGUSTUS CDS 10342 11666 . + 2 ID=cds.g6154.t1;Parent=g6154.t1 #PROT g6154.t1 g6154 MEIKHGNVRVLQLVLTTFALFALCRSGAQAETLTFTLIHTGSLRGFVQEQSIVTTYLQANGNLTSNAKTSTFGGLPRIRTLGNSDFFNGPQVYVDGFTKNVLYDVVISNLDISGAASAPVRSALKNYAIYDVPTTSGITMKVGVVGWVDLAMCDQTSCKADGVTVIVKEPTSALNYAVSQLRAKGVEAIIAIGGGLESMASAKSMASKVNFVDVFIFNGNGAGMHLSDVVTDGLTYRVGPYPLTFATPNGGSAIAVGVAGTGLYAGMINLTFTNGNLVAYDGKPFLLHGCNNPNAPQCYANDPEAATLIDTYVADLNKYRQQVIGNAGTVIDGLRERCRFRECTAGNFVVDAMRWKMGDKCSIAFMNGGFIRASFAIGNVTFGDVQSMLPFNNAISTFEVSGSVLLAALEHSVSLIPLDPMNLTAATILVNEVSGTGRFLQVGGIRMSVDPGKPAGTRVFRVEVLQPDGTFVSMNPTTLYKTCIPAVTRQGIDGYTSLRDAEAINVYDFGPNVDLTMFNYIVDLQRRGMNVSSYLEDRIKYVYDSDLLPKICPKGCNHGTCVDYNKCQCEVGFLGDDCSIDARNNTNGNCLGRFLTLVDSQSGRVTMCSKQSVGSGNSVAVSCVWSTFSSNQWTPLADLSPNAPPNSDHIVNGVNGSQYGIVQNGLLFRASQTTSWQIQAMWDCSGCQGL* # PASA_UPDATE: g6157.t1, single gene model update, valid-1, status:[pasa:asmbl_7114,status:12], valid-1 NODE_421_length_24115_cov_31.138 . gene 21209 24088 . - . ID=g6157;Name=g6157.t1 NODE_421_length_24115_cov_31.138 . mRNA 21209 24088 . - . ID=g6157.t1;Parent=g6157;Name=g6157.t1 NODE_421_length_24115_cov_31.138 . five_prime_UTR 24085 24088 . - . ID=g6157.t1.utr5p1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . exon 24022 24088 . - . ID=g6157.t1.exon1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . CDS 24022 24084 . - 0 ID=cds.g6157.t1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . exon 23827 23892 . - . ID=g6157.t1.exon2;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . CDS 23827 23892 . - 0 ID=cds.g6157.t1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . exon 23310 23459 . - . ID=g6157.t1.exon3;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . CDS 23310 23459 . - 0 ID=cds.g6157.t1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . exon 21744 23110 . - . ID=g6157.t1.exon4;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . CDS 21744 23110 . - 0 ID=cds.g6157.t1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . exon 21209 21601 . - . ID=g6157.t1.exon5;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . CDS 21274 21601 . - 1 ID=cds.g6157.t1;Parent=g6157.t1 NODE_421_length_24115_cov_31.138 . three_prime_UTR 21209 21273 . - . ID=g6157.t1.utr3p1;Parent=g6157.t1 #PROT g6157.t1 g6157 MGVHNIHAVRDSYLRVSELCQSRSDDANWLSALESTKWLQLLSVLMMAATEVVNHVDANDCSVLVHCSDGWDRTAQLTSLAELMLDPYYRTIKGFQVLVEKEWMSFGHRFADRMGHAVPPADPMERSPVFVQWLDSVHQVFLQHPCAFQFNERLLLMLADLAYTCLYGTFLCNSERERKVADLAERTSSIWSVLRTGEPTGAGANFGLNIALAMGGAVNNTMSHATPASNGGTGACGMTSGSDEKMGPPSSTSSSSPVPPKRSSVPQLPTRRDFVNPLYRPTETSGVLRVNWRVRCLSVWHAHFFRFEGQQQQQHQQQQQPTTAHNPTTAEVSGRGSVPSSGGILGGFGTGGGGGGFLLREMGIRVTELERTARDARLELIHQRSLKRRHKELLSRAFSVWWEAADANREHRVAVRAACRPIVHDIIEASLAQCGALPRDGSLGAGRDSVGGRRLMYTGGASVAGVGTAARLGVNHFGRVGRASSTGALGIGMAPTPMSFGTPLGSVDESPPSPLQIAPTVLWVPDHAATACMKCHTKFWLAVRKHHCRSCGGVYCGTCSGYFAPIPDLGILETVRVCCDCYASLVSAQSADADQSPTKCTDDDWFDAAGATSSVAVSVVDAHTEGTSGRKTSTSSTGSAEGAKQQHNSHRPIAKRV* # PASA_UPDATE: g6153.t1, single gene model update, valid-1, status:[pasa:asmbl_7113,status:3], valid-1 NODE_421_length_24115_cov_31.138 . gene 1521 5864 . - . ID=g6153;Name=g6153.t1 NODE_421_length_24115_cov_31.138 . mRNA 1521 5864 . - . ID=g6153.t1;Parent=g6153;Name=g6153.t1 NODE_421_length_24115_cov_31.138 . five_prime_UTR 5723 5864 . - . ID=g6153.t1.utr5p1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . exon 5659 5864 . - . ID=g6153.t1.exon1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . CDS 5659 5722 . - 0 ID=cds.g6153.t1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . exon 4650 5435 . - . ID=g6153.t1.exon2;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . CDS 4650 5435 . - 2 ID=cds.g6153.t1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . exon 3953 4267 . - . ID=g6153.t1.exon3;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . CDS 3953 4267 . - 2 ID=cds.g6153.t1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . exon 2531 3792 . - . ID=g6153.t1.exon4;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . CDS 2531 3792 . - 2 ID=cds.g6153.t1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . exon 1521 2259 . - . ID=g6153.t1.exon5;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . CDS 2083 2259 . - 0 ID=cds.g6153.t1;Parent=g6153.t1 NODE_421_length_24115_cov_31.138 . three_prime_UTR 1521 2082 . - . ID=g6153.t1.utr3p1;Parent=g6153.t1 #PROT g6153.t1 g6153 MLHRLFRSKRQMHVAVACSLLVVACIYGLRGGSGKAQAPQRGARIIFDVGSLKLRYEQEDEPTESGDDSALAYEGAGDAEGEFIPLPAVPKPQQGRPGAMNRLDIAHGSNDNRAHVAPGDDAQIIAVSEKQVEEEPPPLDGAVVGAADKAEGGGVLSPGDEEENTKLLAAAAAEDAIDPMSGSLRHMSQQAKVYRIEPRVATEEALKPPSDLEAETTFTDIITGALARHVYLDLCGSSLAATRLIPRIYGRPDTTDTLTHFMATLPESAAFQRILGYLRPVKTGYYVFTVGCAGECELYLNPKGASRIGLRRIAHVFAATMPTQAFNADKMVLDDSAAIELSVDRTYAIDLVHKHSDVATVTVTWRLFKDPPTRSILISGTAIALSISERDCHSCNDRFFINRILPSLSGRHPDEHPILQNTFLSSPDPSRPQAPRLPIPLFYSNGPLPPFLATYQRKDLGDRSLLAGLLPECDYDPGYLVKSRIGRYQGHQRIVFTDVFPGDNTTMLNVTGGAVAGTKVMDVSLARLAASRLAEIIALHAAAGETLPMRVPAEQRYSLESISRILKKFDRQKSRIRFFVELTMKRGDGARQFFSEYLYFVPIPPAGTKTYRSMCRPAGVEWERKAFVHLVLPVKNQGQWVQYFVADVNAIYDATGDELFDVTLVDYDSTDINMEVALSRLAVPYRFVKRTGNFERAGGLQAGIEAIGPTDGIVFTCDLHLSMPPLLLDMIRKHTIRGKQAFAPVVARLNCGETPLFPRGFWELSGYGLFSMYRSDFGRMGGMNTTAYKDVRGGEDLEMLDRVLMAGYEVERLRIPYFYHFFTGKRGLWVRAQQAQAPPAATPTQAPTVAIPPNVAGVAAGGGGGIK* # PASA_UPDATE: g6152.t1, single gene model update, valid-1, status:[pasa:asmbl_7111,status:12], valid-1 NODE_421_length_24115_cov_31.138 . gene 421 1270 . + . ID=g6152;Name=g6152.t1 NODE_421_length_24115_cov_31.138 . mRNA 421 1270 . + . ID=g6152.t1;Parent=g6152;Name=g6152.t1 NODE_421_length_24115_cov_31.138 . five_prime_UTR 421 422 . + . ID=g6152.t1.utr5p1;Parent=g6152.t1 NODE_421_length_24115_cov_31.138 . exon 421 662 . + . ID=g6152.t1.exon1;Parent=g6152.t1 NODE_421_length_24115_cov_31.138 . CDS 423 662 . + 0 ID=cds.g6152.t1;Parent=g6152.t1;5_prime_partial=true NODE_421_length_24115_cov_31.138 . exon 914 1270 . + . ID=g6152.t1.exon2;Parent=g6152.t1 NODE_421_length_24115_cov_31.138 . CDS 914 1138 . + 0 ID=cds.g6152.t1;Parent=g6152.t1 NODE_421_length_24115_cov_31.138 . three_prime_UTR 1139 1270 . + . ID=g6152.t1.utr3p1;Parent=g6152.t1 #PROT g6152.t1 g6152 TEVQSHCYFIVDNIVTHYFKSMTRPRNGGGESRVLAERFAQFPSILPSILSHLLRTVMYDEAQKQLVARPLLPLILVEEKFFNEWKANEIASRPADRQQLLQKFFDDLMGDIERNLQQRNRDRFMQRVNTFKHDVSMISRPTAGKSGEAFDVLL* # ORIGINAL: g6811.t1 original gene structure, not modified by PASA NODE_2572_length_5841_cov_33.5631 AUGUSTUS gene 327 5707 . - . ID=g6811;Name=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS mRNA 327 5707 . - . ID=g6811.t1;Parent=g6811;Name=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 5389 5707 . - . ID=g6811.t1.exon1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 5389 5707 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 5054 5160 . - . ID=g6811.t1.exon2;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 5054 5160 . - 2 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 4672 4789 . - . ID=g6811.t1.exon3;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 4672 4789 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 4222 4373 . - . ID=g6811.t1.exon4;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 4222 4373 . - 2 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 3777 3848 . - . ID=g6811.t1.exon5;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 3777 3848 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 3463 3603 . - . ID=g6811.t1.exon6;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 3463 3603 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 3043 3173 . - . ID=g6811.t1.exon7;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 3043 3173 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 2604 2735 . - . ID=g6811.t1.exon8;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 2604 2735 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 1993 2130 . - . ID=g6811.t1.exon9;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 1993 2130 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 1583 1823 . - . ID=g6811.t1.exon10;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 1583 1823 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 1151 1269 . - . ID=g6811.t1.exon11;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 1151 1269 . - 0 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 863 931 . - . ID=g6811.t1.exon12;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 863 931 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 513 605 . - . ID=g6811.t1.exon13;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 513 605 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS exon 327 399 . - . ID=g6811.t1.exon14;Parent=g6811.t1 NODE_2572_length_5841_cov_33.5631 AUGUSTUS CDS 327 399 . - 1 ID=cds.g6811.t1;Parent=g6811.t1 #PROT g6811.t1 g6811 MQLKHLGVQTRRVPVIVPSQPGSPATLHAASSSTSSTAQPASSTSSAEANRSAIAAMIASGGHSVSSEWQRTLNKAQRILTMEKHRSAPGGRRTSQEARDLDTLAKIELEKPDRSSIIGRGKWLTLYSRAYVRVYQRDMSFKTIHCDIRTHAGELVKLAAQKWRLDPSKVAFHMYVQRNDIERRLRDDEAPLIMQKQWLEESGYCDEDNLQLQGRYDHGNLFRFVMSDAGPTVNDHSDFKSRMEAAFESVTEKNELTTKLDLSDQNLDEFIGEDSRLPLEISLPLSAIETVITVLNLAGNFLQSYPAELCSLKSLQRLDLSNNALTTLPDAVARLASLSFISLRQNSFTEVPPVIFKITGLRELDLCENEISSLPDALSKLSLLENLQLSRNKLKTLPSWLESMVNLRRLDISHNCIDELPRLALAKLQRLICNDNSFGSLPLCSPHVTSAILARNGLRSFQPSVDFARVEVLDLSHNTIAALPDAFFHMANLKALVLDGNRLRSLPSSLARLPTLEWLSAAFNEISTLPDDWSAMRALRRLSLVGNAIPALPDDILWLPSLEYLNAGSNHLQYLSGPFRLDEEAIDSIRLGEGTGPIVIPLSAAAAPLQRTSSIRELYLGDNQLTDRCLHVIR* # ORIGINAL: g12439.t1 original gene structure, not modified by PASA NODE_2015_length_8096_cov_42.387 AUGUSTUS gene 121 496 . - . ID=g12439;Name=g12439.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS mRNA 121 496 . - . ID=g12439.t1;Parent=g12439;Name=g12439.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 377 496 . - . ID=g12439.t1.exon1;Parent=g12439.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 377 496 . - 0 ID=cds.g12439.t1;Parent=g12439.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 121 205 . - . ID=g12439.t1.exon2;Parent=g12439.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 121 205 . - 0 ID=cds.g12439.t1;Parent=g12439.t1 #PROT g12439.t1 g12439 MSDITRSNFVDRLPAVKRAIDSAAFVAIDLEFTGLTVSPEAEGSVFDSAADRYTKLSSTGRSFMVTQF # ORIGINAL: g12440.t1 original gene structure, not modified by PASA NODE_2015_length_8096_cov_42.387 AUGUSTUS gene 1499 8096 . + . ID=g12440;Name=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS mRNA 1499 8096 . + . ID=g12440.t1;Parent=g12440;Name=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 1499 1570 . + . ID=g12440.t1.exon1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 1499 1570 . + 0 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 2040 2103 . + . ID=g12440.t1.exon2;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 2040 2103 . + 0 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 2302 2361 . + . ID=g12440.t1.exon3;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 2302 2361 . + 2 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 2512 3329 . + . ID=g12440.t1.exon4;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 2512 3329 . + 2 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 3486 3740 . + . ID=g12440.t1.exon5;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 3486 3740 . + 0 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 3901 6270 . + . ID=g12440.t1.exon6;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 3901 6270 . + 0 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 6490 7126 . + . ID=g12440.t1.exon7;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 6490 7126 . + 0 ID=cds.g12440.t1;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS exon 7403 8096 . + . ID=g12440.t1.exon8;Parent=g12440.t1 NODE_2015_length_8096_cov_42.387 AUGUSTUS CDS 7403 8096 . + 2 ID=cds.g12440.t1;Parent=g12440.t1 #PROT g12440.t1 g12440 MFASQMAAKGKRAENMDGDFNPQKCAGPLHICGRCCDLISPGIKQGALVEAAPDGGVVIAPFWVAGSACADVDGVRVLLMRLAEKRDETPCHATLTLLQLVLQCRHTIGEIPLAACLVSLFVDPTTEVATFLALRSSIESIVEVLAPSKSRPPSHIESFNSYIASPSLEMAGSLVDAVDIFAELKSALLFKILTIIVMDGTIPSKTRMLCETLEAAILGSSDVSCALMQVQVGPHSDVTISIACLVAVVLQSCDVLRKVFDNIENLPLSTVRELSMYSTWRRFGGNVPPPLSISMDFHSQYEPCVETLATAEIQQFLRLSEYSNDAWELLYTTLWPDAPFELAWRPLIEILTGEGCPGKDRHRIEKFAERISSSTTVPLAEVYDLIARLSALEGGKAATRGATIRMFLRSTREDAKSINLKGALQNCRESDILSAFCDVDCDALAAGELFAAASQIKGCQLKTSFCNKLLDFVSTSADNGKFLLHLQRALSVVDALTVSVHEPHLPSILERMVASLQSADHAMLVFACATKLVDLMPRMTVGSIVVLMTSELLWDLPVNIQLGEPLTASLKLRAIVFADLYGRAPLDITIVRRLSQSIIDGSIPFRSYSDPICALLQPDEHLITSLRNVTFEAQDSFELTLAPIIALACLHSRRNADSVWKNAIMLARSLIEKGLLEFCGAIDLAIEMCEERPRMLALVDGVPSAALGMLTRWAGDSCDSVIRLMVGVDSPNGVPVDGRDVMAGIIEGSLANFVVSDRKKELALQIASSEALMLRLLPFSDHPASRTFVNYAGSRIVKETTLSVQQQCIRLIVVKWLLPSVAHNAATDLIVHLTKWILACDVVGFGCRILTELIGSTVWLRKALWKAIGPITLKGAAFVNFNSTQRIADGANQRLADLLRAAGRANQMHTSNLLFILATQSDLALKVAVEALRDEPNVSLHAVLDLPKLRGSRNWPACAKPMIATLIDEVFCSTDDALKWRQMVLILKDIMTFSEQVTDVSAALFKRKLKPAPRQYRPFTGAWKKGDGDLVLIVSQAIKEVERVILPQDLIEALFDAITIARALPSADCDARARALAGHASLSASAHPGQATDAGARRGAVASIYIGAGLQNRVPQITVDAARSAPVFLFDTSAEGPEAGRSTVEDLTERVRSIRELFFCVAKIARQPAASLPEMQLLLEGSFTKQLELSHGRIDIMSLYEIMDADKSQKPVQEVMTYLAARFSRSVFERFLAELPPGVAFKASTHLSAMDSETLLRIVQVAKNGELACNCLRVISQRGDLAPFVTSGVLVQTLQGCQWQDARVILADFERLSAWPLTIVDGVARETARVLASTYGGFVLAVTAMSQRTPVAAGLTDAVINGTVYVPNSVDDAARLIALLGGLTSECSKIFKEVYTFHVVRRLGLTDEPRKRLLKLTKPDYVRRIVATNMAPANPTYKEVGMQFLRNTFCDLTFLVGPDRTKFAVNKVIVASASLMLRSMLCGPFSESGSSEIALENWDAESFGRMIEFIYTGHYVSTNDFEELLAARTIAEYFDVPTYRSCILANLGDRIRGGKVVELLGVFDQVPWQDILKAFRTGVAQKERDDQSGEFFLAHRVLTAVSKKYADVLGIADAVVANNGGANAPRAAAGPPNNNNNNNNNNNNNNNNNNNNNNNN # PASA_UPDATE: g9849.t1, single gene model update, valid-1, status:[pasa:asmbl_4632,status:12], valid-1 NODE_2600_length_5729_cov_39.2881 . gene 3329 5727 . + . ID=g9849;Name=g9849.t1 NODE_2600_length_5729_cov_39.2881 . mRNA 3329 5727 . + . ID=g9849.t1;Parent=g9849;Name=g9849.t1 NODE_2600_length_5729_cov_39.2881 . five_prime_UTR 3329 3381 . + . ID=g9849.t1.utr5p1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 3329 3413 . + . ID=g9849.t1.exon1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 3382 3413 . + 0 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 3518 3580 . + . ID=g9849.t1.exon2;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 3518 3580 . + 1 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 3756 3850 . + . ID=g9849.t1.exon3;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 3756 3850 . + 1 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 4186 4304 . + . ID=g9849.t1.exon4;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 4186 4304 . + 2 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 4631 4783 . + . ID=g9849.t1.exon5;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 4631 4783 . + 0 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 5075 5194 . + . ID=g9849.t1.exon6;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 5075 5194 . + 0 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . exon 5324 5727 . + . ID=g9849.t1.exon7;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . CDS 5324 5572 . + 0 ID=cds.g9849.t1;Parent=g9849.t1 NODE_2600_length_5729_cov_39.2881 . three_prime_UTR 5573 5727 . + . ID=g9849.t1.utr3p1;Parent=g9849.t1 #PROT g9849.t1 g9849 MADVAIESFNKLWDLMETQDYKDPLVVKNVIGLSVGLWGVVYILTWIFSKLFIKTYSAKLSAKEQVFWNMCLVRAAYGIISTACGFYTAIVDDALYKDIVWGKTQFSTFFILFSVGFFAFETVMMLYSNVVYRHFDGFLAFHHICGTVSYYAMAAAGAGHYLAMFVIMDELTTPFTALSWMTLKCGYSSSSVWKINQFLMVHGFHVRSMIETYMWYISFVHRDVIIAQMPIEVKLAIYPPLLILSTILTPYWLYKKTMQIFVQEDWNHDAKSKKKR* # ORIGINAL: g9848.t1 original gene structure, not modified by PASA NODE_2600_length_5729_cov_39.2881 AUGUSTUS gene 284 2591 . - . ID=g9848;Name=g9848.t1 NODE_2600_length_5729_cov_39.2881 AUGUSTUS mRNA 284 2591 . - . ID=g9848.t1;Parent=g9848;Name=g9848.t1 NODE_2600_length_5729_cov_39.2881 AUGUSTUS exon 2112 2591 . - . ID=g9848.t1.exon1;Parent=g9848.t1 NODE_2600_length_5729_cov_39.2881 AUGUSTUS CDS 2112 2591 . - 0 ID=cds.g9848.t1;Parent=g9848.t1 NODE_2600_length_5729_cov_39.2881 AUGUSTUS exon 284 1834 . - . ID=g9848.t1.exon2;Parent=g9848.t1 NODE_2600_length_5729_cov_39.2881 AUGUSTUS CDS 284 1834 . - 0 ID=cds.g9848.t1;Parent=g9848.t1 #PROT g9848.t1 g9848 MSEHGDGVSGVAGGVEGRAGAVASFGSMSNSGMMYEMTDVATGTDHATVKARDTGMHVHRRFSSTNGLDLYVENDLSLNRVDGGQLQYRFSRFRVEAVPASGGDQTPTESERDGGGSLDATSWQGIIGNALRPEMYRPSFKTGPDTSKPSLRYEWQHPGWGSVTNIDLSGEPPLPQPPKANLGQWRATSIAGNDVMASVLYAIGLTIATSGPLAPLCLVLVCLFMVPVLRVISELALAMPYNGGLYSFFLNTSSKFLATIVACLSLLCYISTAVVSGASASEYLGGEVSSINTFWLTIGIFCAFAGLCIFGVKESSLIAISIFFLHLVTLAILVVAGVVFVIRDGGDILKANYAASQFENPAYKIFFGFCVAMLAGTGFETTANYVEETGPGVFTKVIRNMWGLFVLFYPVLALLMLGSLPFNVIVANPSNTLSLMGEACAGKWLRWLVAIDAFIVLCGGVLTAFVGVVGLIERMTFDRCLPLFLANRNRFFHSNHWIIVSFLGLCCGLYAIVNGDVTSLAGVFTLAFLSVLTSFTVAGLYARYKRPRLPRVVVTSGYFLGIGLVAMSAALIGNIYLDPQMLSYFILFYLIPLGVVTVTLNKVRIYKLIMHMLHRSKKFHKWGDVFVAKVKRSKQHAVGFMTSTDEIHILNRAVLYTTANEFCNRIKLIHVYEKLEE # PASA_UPDATE: g9545.t1, single gene model update, valid-1, status:[pasa:asmbl_3533,status:12], valid-1 NODE_2106_length_7710_cov_43.5792 . gene 213 3465 . - . ID=g9545;Name=g9545.t1 NODE_2106_length_7710_cov_43.5792 . mRNA 213 3465 . - . ID=g9545.t1;Parent=g9545;Name=g9545.t1 NODE_2106_length_7710_cov_43.5792 . five_prime_UTR 3288 3465 . - . ID=g9545.t1.utr5p1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 3186 3465 . - . ID=g9545.t1.exon1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 3186 3287 . - 0 ID=cds.g9545.t1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 2220 3087 . - . ID=g9545.t1.exon2;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 2220 3087 . - 0 ID=cds.g9545.t1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 1731 1879 . - . ID=g9545.t1.exon3;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 1731 1879 . - 2 ID=cds.g9545.t1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 813 1442 . - . ID=g9545.t1.exon4;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 813 1442 . - 0 ID=cds.g9545.t1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 471 655 . - . ID=g9545.t1.exon5;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 471 655 . - 0 ID=cds.g9545.t1;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . exon 213 302 . - . ID=g9545.t1.exon6;Parent=g9545.t1 NODE_2106_length_7710_cov_43.5792 . CDS 213 302 . - 1 ID=cds.g9545.t1;Parent=g9545.t1;3_prime_partial=true #PROT g9545.t1 g9545 MLPELPEVAPRPPYTIAYVDLCDEILHEALGDTQITIKLDGVPSSRSNVTLVPVQEDGLVTFDPPEVTFSHSNFQIPQTVTLRYAAPGKGIINLTSPDLTSRELLVKNAHTIETVPAPTLDARTRGLVMIQGCPSVGIRISISARPTHTLIIRLSCMDVAADPEPSVIEFEPEDWHHVRRARVNYRRRDKTKGGDKFMGRGGKDDDSSGKLVIVADHTHGNYYGITTTVDMPPSITLMTHAKTIERGLDESMGAGSLTGQELEEIDAGAIAVDAELSLTSETPGEQFDEDLTPLAARFEYEELLLEETRGEISVRVALSRDLIGPVALEAICSGDVSAMAVSPMRLEFARGGPLVKTITLKYVSGPSLASVSLLPVPLGPDAETGEEDGVLSTNTLMVETVPRAPRPFFIFPGDDTNSVKDEPAPQIAAEKSVLALESGSSVDVAVDEGTTASPQKSAQDIPALVTSDVSVDQTQPQPQPQPQPQTQPESTSGEPTADIADTSEVRDTSPRRLSIPPKGLVSRREPLVIHAAVGVAEVSFKLDARPVAPYAITFSCENDGVAFDPPRINVGTDYNFEPLSVRLQYNVATVGKVTVHGGYVPIPGGRDHGRRRHDQPQPIVLEDLEDASFSIKSVKTPGFIVDGFKDFLHEAVGRVEFRLRPEVRPSSKSIKLTL # PASA_UPDATE: g9546.t1, single gene model update, valid-1, status:[pasa:asmbl_3534,status:12], valid-1 NODE_2106_length_7710_cov_43.5792 . gene 5185 7643 . + . ID=g9546;Name=g9546.t1 NODE_2106_length_7710_cov_43.5792 . mRNA 5185 7643 . + . ID=g9546.t1;Parent=g9546;Name=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 5185 5380 . + . ID=g9546.t1.exon1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 5185 5380 . + 0 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 5663 5684 . + . ID=g9546.t1.exon2;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 5663 5684 . + 2 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 5874 5939 . + . ID=g9546.t1.exon3;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 5874 5939 . + 1 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 6138 6280 . + . ID=g9546.t1.exon4;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 6138 6280 . + 1 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 6687 6864 . + . ID=g9546.t1.exon5;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 6687 6864 . + 2 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 7019 7159 . + . ID=g9546.t1.exon6;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 7019 7159 . + 1 ID=cds.g9546.t1;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . exon 7534 7643 . + . ID=g9546.t1.exon7;Parent=g9546.t1 NODE_2106_length_7710_cov_43.5792 . CDS 7534 7643 . + 1 ID=cds.g9546.t1;Parent=g9546.t1;3_prime_partial=true #PROT g9546.t1 g9546 MSHTEKNMFVLSQDNELSSKVAKMAYGVVTRSANANGRVKFLCDIDKSCLIANFDLRGWARAPNESDDWNFYWANVQNARNIFNPETGYRLNDNQFVNHFPQHLELTRKDLMVKNIKRYRKELEREGHPIAEKDELGRYLYLDFVPVTFILPSDYNLFVEEFRKNPSSVWIMKPTAKARGIGIFLINKVAQVKKWSRETKEKIGSQPLPVKDAYLISRYIENPLLIGGKKFDMRIYVLVTSYRPLKAYIYQQGFCRFCTVKYTSNVSDVDNMFVHLTNVSIQKHG # ORIGINAL: g4601.t1 original gene structure, not modified by PASA NODE_3057_length_4432_cov_84.5729 AUGUSTUS gene 323 2428 . + . ID=g4601;Name=g4601.t1 NODE_3057_length_4432_cov_84.5729 AUGUSTUS mRNA 323 2428 . + . ID=g4601.t1;Parent=g4601;Name=g4601.t1 NODE_3057_length_4432_cov_84.5729 AUGUSTUS exon 323 2428 . + . ID=g4601.t1.exon1;Parent=g4601.t1 NODE_3057_length_4432_cov_84.5729 AUGUSTUS CDS 323 2428 . + 0 ID=cds.g4601.t1;Parent=g4601.t1 #PROT g4601.t1 g4601 MVCFTAAGTSLEKFIAAYNKTVDISKYPFPYEFLTDYSKLDATNIPRTAFDSKLKGESIDDDTWALFQKTWAEQGCKTLYDYIVFYNLHDVQPFLKATQNYSDIFWNFGGGRTRVDMLKGGAVAIAGLAGKIQEACSPLADYRLMCEGDEPVNKLLDDAMQGGVCMVFHRHHKTQETYIRNNPETLCRYIVGLDANALYLNAQAQKQCTGDFKHQDLTGAPWETQQLIIDRIADGNIFGFARVDIVVPEELRGSFADYPPIFKHAKGEDLQQLLSPIMRQYAETHGRSAGNALVSSMWANGQSIFTELLRWYLRKGLKITRVYEFVAYMKPTECHKEYAEIVCDGRRGGDSDKSMAPQAETLKTVGNSSFGGSVMDKTRHMKTSYVSVNNVKRRFNLMRSPYYVSQNLINDSTIEFTMKKRIVKNNLNKQLGTAVYAWSKLRMLEFYYDFIVKYFDRADYQLCYQDTDSFYMAWSSADLESLVKPEMLEEFKRDRVNWMTVPKCTSTEKIFQDEIVAKFFDPTQEKYTLASFYITFLNSNLEKEVREDKVDEYRRAREAWFNRTDIQSIVTFKALDGVTDLRLPLWKWSERKHGLFKPEHEATCGEFVALTCKMYAASKKGKDTKYSAKGLNRSNFKQSDNLIEQYKRVLMQGTEHYAVNCGMRCRDNGVQNYEQKKRGLNAFYTKRYMCDDNVSTTYTEI* # ORIGINAL: g3380.t1 original gene structure, not modified by PASA NODE_591_length_20516_cov_40.6031 AUGUSTUS gene 101 939 . + . ID=g3380;Name=g3380.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS mRNA 101 939 . + . ID=g3380.t1;Parent=g3380;Name=g3380.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 101 277 . + . ID=g3380.t1.exon1;Parent=g3380.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 101 277 . + 0 ID=cds.g3380.t1;Parent=g3380.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 652 939 . + . ID=g3380.t1.exon2;Parent=g3380.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 652 939 . + 0 ID=cds.g3380.t1;Parent=g3380.t1 #PROT g3380.t1 g3380 MAISKCDTFDFLIDIVPRDDMKAAKKPDEARPAVMAPEQLNYYYQLAQQHGGALIPGMQEHYLAQLQQLQFMRLQQLQQINAAAAVAAAQQQASGAGSASTQGTTQAGTAATTATTADFQHQFQLFQQAQAAQAQQYAAAQQGSGYALPHQQNS* # ORIGINAL: g3382.t1 original gene structure, not modified by PASA NODE_591_length_20516_cov_40.6031 AUGUSTUS gene 7985 12047 . - . ID=g3382;Name=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS mRNA 7985 12047 . - . ID=g3382.t1;Parent=g3382;Name=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 11358 12047 . - . ID=g3382.t1.exon1;Parent=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 11358 12047 . - 0 ID=cds.g3382.t1;Parent=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 10960 10996 . - . ID=g3382.t1.exon2;Parent=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 10960 10996 . - 0 ID=cds.g3382.t1;Parent=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 7985 10746 . - . ID=g3382.t1.exon3;Parent=g3382.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 7985 10746 . - 2 ID=cds.g3382.t1;Parent=g3382.t1 #PROT g3382.t1 g3382 MDDDDSSGNETLPDRIHVIDVDNSLSADTWRRSTDASGDWHPHSHFDTVTATDKDTAEWSRGTAQFSQLSDHHSPLLSPGDTRTPTSVGQVPHKRVVVQVSSDVPNNDDENQQQFAGLTSRLEIHSGGVGSASAKPRRASIQPQAEGLARGRSTRMSARRRGSVMPGSEGAAYTNPGGSVTTGAGGQDGGDGGSRATGVTVVVRHTAEFTGEMNISRHLEWAKQYRIFIELMLPIVTAMVTMVDPNILTHSIAVVIFAGLVIYANRTIGDELDAEDCKKKLFCRTNCVHSVSRYSWPLKQVVQVSVAMYAAILMTYTIVTVAKGSAFNLVTHSTTITNGANTTTTTDLAQLYTKNLVVLGAASVLHILCSWLQYMATSAAFLSFAFVWSSNPAMSQLKLNNSWKVRASSAFWACVAFVFQAPYEFPLLRTWITSVHYALDELDLIFRNGAMPSTPGADNTRSTSEADTTNAPTTAKAEPICAAKLSLFKRAKRRLRSFLYGELLCMVPDDSEFGAQARDELKGGCVKTIYEKLAKTMVKVTRVSSARFRLLSTSIDSYDVNVSPFREEIVPFRENTDSRREDIDDITSECEVKKVPDIEGLRSRFQNIVKTTKSGVNNRSRSESNGKPSTTTKQSDVPVEPVDQIRNIARKIEAFLAAYDELCVMVDAEMVKVSLDSDEVDRARHDISPEMRDVEEQLRPGRIEDPISRGKRLILRKIFHDITGNSGFVDAYRCQLHSMRDPPGDGTENQHRFVAVNDLLDLIESARYATSILDSVVRALDEIETTMKGASYHDERDFKKKYDVAYSEEVSIACAGTRECLCAAAEAVDKAIADVEDTLQGAIGSHEVNEAVLIAEIKQQKKVNFTDDVETTKKEKDERKTARTRKPKESRDADRKDLVKYPTMALRTYTIAPTGDDETPSKYIPSTLAFAVRIPFSCPPLVTFMKWMNRVAIEDDISKARVRLADAIAQQNVGTVLKSLAELGSLREELQEASAEENSNGFAPSSEGDDDDDDFGAIENFLMKDLSDLILMYGDMFYDGSNDSTGDDAQAQSDSTPPNDSKKHLYVTKNVAVNNFPFNAGGEQQAEGEVPAVREKGEVKYSVNEGAVRQMVEDLQKNQKELYKCAGNDLADNWKRMLEIVVAPNLEAFIPCKFVFDHKTKS* # ORIGINAL: g3383.t1 original gene structure, not modified by PASA NODE_591_length_20516_cov_40.6031 AUGUSTUS gene 13636 14114 . + . ID=g3383;Name=g3383.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS mRNA 13636 14114 . + . ID=g3383.t1;Parent=g3383;Name=g3383.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 13636 13661 . + . ID=g3383.t1.exon1;Parent=g3383.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 13636 13661 . + 0 ID=cds.g3383.t1;Parent=g3383.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS exon 13805 14114 . + . ID=g3383.t1.exon2;Parent=g3383.t1 NODE_591_length_20516_cov_40.6031 AUGUSTUS CDS 13805 14114 . + 1 ID=cds.g3383.t1;Parent=g3383.t1 #PROT g3383.t1 g3383 MSRGNGKRFSQKGQLLGDYEEDDVPFEGELPSGVKYTVTAGTAVALIAELKEKRKKLQKRASSALTDTAWTAFRKRDHRPELRGVHSLSAFDFAQMWKEKMAGDKVNGRRR* # PASA_UPDATE: g3381.t1, single gene model update, valid-1, status:[pasa:asmbl_8362,status:3], valid-1 NODE_591_length_20516_cov_40.6031 . gene 2005 7434 . - . ID=g3381;Name=g3381.t1 NODE_591_length_20516_cov_40.6031 . mRNA 2005 7434 . - . ID=g3381.t1;Parent=g3381;Name=g3381.t1 NODE_591_length_20516_cov_40.6031 . five_prime_UTR 7231 7434 . - . ID=g3381.t1.utr5p1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . five_prime_UTR 7066 7110 . - . ID=g3381.t1.utr5p2;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 7231 7434 . - . ID=g3381.t1.exon1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 7063 7110 . - . ID=g3381.t1.exon2;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 7063 7065 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 6866 6927 . - . ID=g3381.t1.exon3;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 6866 6927 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 6443 6581 . - . ID=g3381.t1.exon4;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 6443 6581 . - 1 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 6001 6126 . - . ID=g3381.t1.exon5;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 6001 6126 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 5519 5669 . - . ID=g3381.t1.exon6;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 5519 5669 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 5102 5247 . - . ID=g3381.t1.exon7;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 5102 5247 . - 2 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 4606 4794 . - . ID=g3381.t1.exon8;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 4606 4794 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 4250 4366 . - . ID=g3381.t1.exon9;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 4250 4366 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 3944 4080 . - . ID=g3381.t1.exon10;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 3944 4080 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 3609 3757 . - . ID=g3381.t1.exon11;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 3609 3757 . - 1 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 3282 3367 . - . ID=g3381.t1.exon12;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 3282 3367 . - 2 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 3069 3143 . - . ID=g3381.t1.exon13;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 3069 3143 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 2731 2870 . - . ID=g3381.t1.exon14;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 2731 2870 . - 0 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . exon 2005 2426 . - . ID=g3381.t1.exon15;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . CDS 2258 2426 . - 1 ID=cds.g3381.t1;Parent=g3381.t1 NODE_591_length_20516_cov_40.6031 . three_prime_UTR 2005 2257 . - . ID=g3381.t1.utr3p1;Parent=g3381.t1 #PROT g3381.t1 g3381 MPNTVLSVRSSGSSLGSNASRRSKNSYRRVSPHSSVDESLFRNATKEAQDVQSSPRQRAHSDSERLDESIEVPRDLVKKIRTVNTKGRGHAQDVESDAIVLTQLDYDRLKEHARIKTRQEELNEMSQERLAKISKLEDARDRKVRMQGLDNSRVKNQKLNEIEQEAVEKSNYLRQRAQILIDEEEDEIKHMNELLLNAKCMAIRDVQIHEKQLIRRELVDEDRRLDTLMETERIRAIEDFEARERAVREERERAAQQIKRQIEDREQQRLIEAELRDQETRAILEEMDRRREEDLLRLQQRKEEQRKFLEDVALSNEEALRHKKELAIREKEYEQKLAEYAKEKEQREHAYQLEVARNKAEREKERERIYRLQQESSNEEEAREALRAKRVLESVEREWRRKERDEAEKQRNNMDRLVEARAQQVHEKKHYLALQAYRDRADFERVIEVQKALELAEKEKVKEEELRRIKVAEEVRGQIRGKETQRQTERKDFFAEGRQQDKDAQERRLKLDEIKRRKLAELREVGIPEKYCNDVERRAKPPTNIFTFYADSGMMTKHEKPV* # PASA_UPDATE: g3384.t1, single gene model update, valid-1, status:[pasa:asmbl_8363,status:3], valid-1 NODE_591_length_20516_cov_40.6031 . gene 15671 20415 . - . ID=g3384;Name=g3384.t1 NODE_591_length_20516_cov_40.6031 . mRNA 15671 20415 . - . ID=g3384.t1;Parent=g3384;Name=g3384.t1 NODE_591_length_20516_cov_40.6031 . five_prime_UTR 20285 20415 . - . ID=g3384.t1.utr5p1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 20103 20415 . - . ID=g3384.t1.exon1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 20103 20284 . - 0 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 19719 19796 . - . ID=g3384.t1.exon2;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 19719 19796 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 19417 19488 . - . ID=g3384.t1.exon3;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 19417 19488 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 19159 19233 . - . ID=g3384.t1.exon4;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 19159 19233 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 18928 18999 . - . ID=g3384.t1.exon5;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 18928 18999 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 18721 18792 . - . ID=g3384.t1.exon6;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 18721 18792 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 18486 18554 . - . ID=g3384.t1.exon7;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 18486 18554 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 18086 18154 . - . ID=g3384.t1.exon8;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 18086 18154 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 17817 17888 . - . ID=g3384.t1.exon9;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 17817 17888 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 17632 17700 . - . ID=g3384.t1.exon10;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 17632 17700 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 17452 17523 . - . ID=g3384.t1.exon11;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 17452 17523 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 17257 17328 . - . ID=g3384.t1.exon12;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 17257 17328 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 16994 17065 . - . ID=g3384.t1.exon13;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 16994 17065 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 16419 16879 . - . ID=g3384.t1.exon14;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 16419 16879 . - 1 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . exon 15671 16040 . - . ID=g3384.t1.exon15;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . CDS 15937 16040 . - 2 ID=cds.g3384.t1;Parent=g3384.t1 NODE_591_length_20516_cov_40.6031 . three_prime_UTR 15671 15936 . - . ID=g3384.t1.utr3p1;Parent=g3384.t1 #PROT g3384.t1 g3384 MSAPYRSHMSSALLLACVGALLFPYTAGAEYGCFGNYCRCDAVSGVLNSCFFPNPTSITSLLHTSYTGKLTSLPAGIFDQLTALESIDIYDTELTSLPAGIFDKLTSLKNLNIQANRGITTLSPGIFDKNTRLTSLYLSDCRLSSLSPGVFDKLTALKTLTLGRNQLASIPADVFDKLTSLTYLDVAGNAFAFSAIYFDKLTTLTSLNIGGNALAISAGYFDKLTTLTTLSLSGSNLTSLPDGIFHKLLDLSNINLSGNQLTSISADIFDFATLEYVDLSVNLLTSLPAGIFDKHSGMKTLRLGYNQLTSLSTGIFDNLRKLIFLDISHNRLASLPWRAFDNQNEFMGLDMSGNPGNKGYLCNAPGAHCISNQCGACFCDAGWRGFLCADECLPGKFGPDCLSRCACPTCDPVTGKGSCVVSSSAQPTGTCSPSISVATTTATAVVTVTETATATVNVMGPVETSTVTVTTTAAVQTVTVTVTDAVTVLATPTSCGSQEDAAAEWTTAFEEWKDQFAEWLRSGCPAAPEHGAGNVV* # ORIGINAL: g10266.t1 original gene structure, not modified by PASA NODE_10225_length_311_cov_91.4237 AUGUSTUS gene 1 281 . - . ID=g10266;Name=g10266.t1 NODE_10225_length_311_cov_91.4237 AUGUSTUS mRNA 1 281 . - . ID=g10266.t1;Parent=g10266;Name=g10266.t1 NODE_10225_length_311_cov_91.4237 AUGUSTUS exon 1 281 . - . ID=g10266.t1.exon1;Parent=g10266.t1 NODE_10225_length_311_cov_91.4237 AUGUSTUS CDS 1 281 . - 0 ID=cds.g10266.t1;Parent=g10266.t1 #PROT g10266.t1 g10266 MANIHSFIDSLPDKYDTDVGEKGTQLSGGQKQRVAIARALLRNPKILLLDEATSALDNESEKVVQEALDVASKGRTTIVIAHRLSTVKNADCI # PASA_UPDATE: g6652.t1, single gene model update, valid-1, status:[pasa:asmbl_1623,status:12], valid-1 NODE_1449_length_11207_cov_53.1332 . gene 6644 8280 . + . ID=g6652;Name=g6652.t1 NODE_1449_length_11207_cov_53.1332 . mRNA 6644 8280 . + . ID=g6652.t1;Parent=g6652;Name=g6652.t1 NODE_1449_length_11207_cov_53.1332 . five_prime_UTR 6644 6724 . + . ID=g6652.t1.utr5p1;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . exon 6644 6910 . + . ID=g6652.t1.exon1;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . CDS 6725 6910 . + 0 ID=cds.g6652.t1;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . exon 7301 7458 . + . ID=g6652.t1.exon2;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . CDS 7301 7458 . + 0 ID=cds.g6652.t1;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . exon 7718 7870 . + . ID=g6652.t1.exon3;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . CDS 7718 7870 . + 1 ID=cds.g6652.t1;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . exon 8109 8280 . + . ID=g6652.t1.exon4;Parent=g6652.t1 NODE_1449_length_11207_cov_53.1332 . CDS 8109 8280 . + 1 ID=cds.g6652.t1;Parent=g6652.t1 #PROT g6652.t1 g6652 MADQFEVIGEDLANNPNAGYDATADFLAREQEELAAFGIAPGQAEFPTDNVDQGFDAFGGEQQQNFYTEAPADEAGGFDAFGDAPAAPAAPEEPEDRYSFVSQVDQSMGEPRAIKEWRAQRESQLATKDTQEKSQVDALFSKGKSDLSEWYQRYEEQKGKTRSTNREAERAFVAERDEVIPGGEWERIARLVDFNPKGTKNSKDTSRLRSILLQLKQTPLVR* # ORIGINAL: g6651.t1 original gene structure, not modified by PASA NODE_1449_length_11207_cov_53.1332 AUGUSTUS gene 135 6024 . - . ID=g6651;Name=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS mRNA 135 6024 . - . ID=g6651.t1;Parent=g6651;Name=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 5834 6024 . - . ID=g6651.t1.exon1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 5834 6024 . - 0 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 5529 5681 . - . ID=g6651.t1.exon2;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 5529 5681 . - 1 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 5221 5339 . - . ID=g6651.t1.exon3;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 5221 5339 . - 1 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 1240 5083 . - . ID=g6651.t1.exon4;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 1240 5083 . - 2 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 799 961 . - . ID=g6651.t1.exon5;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 799 961 . - 1 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 463 607 . - . ID=g6651.t1.exon6;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 463 607 . - 0 ID=cds.g6651.t1;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS exon 135 295 . - . ID=g6651.t1.exon7;Parent=g6651.t1 NODE_1449_length_11207_cov_53.1332 AUGUSTUS CDS 135 295 . - 2 ID=cds.g6651.t1;Parent=g6651.t1 #PROT g6651.t1 g6651 MTETMEVERGLLQSLKKERVSHALARTAGVPVVKQAAEFLSGAQLEWVSGPANEITIQNPVYLKHKRNQEVEKNTPSESVLASHEVRGLAENVIPGLSSTNHGGIERLNERRKTKHEACVARAQEQIGQVAKQLEPRILEVTQDMKQQLAEYDKEYDAHWARLRDDEWLVEQNAAVLDGVRDALIDQLPQRQAIVDHLDFELERLERERSSLVAAILDNAASDLEEIAFMLPDGVSRWVESEMLDMNDVIIKNRKAYAELHARLMRAEVLREAHAMEFWQQRASTWCDLKKQRAIHSLTLLLTGPEALDPSARRRLFEQLNEEQGAHLKRRTDFLRTVSETHPPGCTRSTGREWTRTLAQLDDRLEAMHANMMELFREQEQNFRDHLAARLAETVSDLISSGVFVEEADARSFIEPIARPLLTERDMEADRLLAAVQVALNKHRESLKEPCSTFVEFASGSAGLWTEHEGELRQVETTLQERLERTRAEHDFTNQDLEARLDAIMDRMRQDADRDALAASLQEALQHLDKIERGYHEFQQAAVNVAQTYPMLIRDKLGGYEQRTLQYFGLSKKPIVLATMADRLALMQQLQGKEADATTQVIGKDGRVSLLKRRPSKSGGTGSSSNLLGASTGKKPTAAPQSARLRGRSPSISLPTTEPDQVEDLTKITTSRGNVYYVVRDFFLLAGDPEIGSAQELLGFAFEQKTESRPSSAMGRQNPVPSAGSMMSLVGPTYGVSMATLPVVQPAAAGTPLARTQSVAGVTPAESEQSVAGLYSSESGVLESGEGKEPGLDGSIDSPRNRSPHVSAQESLTSQASMSGFQEDTAVPPVSSGTPEPVVSKQQPQPTAQAQKGQSQPAPRRSGSRQYSRRPTVDMTNTNTQLAVKGAVLVGAATPEPAPIIVDEKPPEGMKYLSEALLPAETLTRMRRAMRRLFLEHIESWAPFVEERAMAAVAAKTEELNNELDLRLHLHAPRANRARMDVHNVRAAELIAHRRRVDEHCAGVVVALDSQRDAFTSMTDDHNSHVAKLKESMEGYVGRLALSGSVQAVFALQKDASKLFDSHLRSIRLSLRTFRDQLDTTLTKLRDANLRFRQSFRSFSEGGNFCIAEIHEYRSRLEELDQAIDETESSIASDLGGREIEQMDAASAEMARFEERFRHHAEDLSLLQREERELGVAMVKVRSEMGIVEADSKDVASRLERLEAFCARCRDPSAPWQSKASAAGPDAYGVQHGGSLSGGVNGADASQGGDADYDAFQTGRVTPALFRRLDVIRRAIHRRAVYLDCLQVPVRLQDLESQLRQIYMFDGPSLSHASSMDSRSNTVERMREIALGPDDLTADMSSGIELISLAGSQAQLRALAGGEGTSGRMSVAGMLPTIEGDNGRDMEGRRSMSRQMMNNPKLTRGSRANSLSNSSLNSVNLNNEDDGGNGVAKSSRPRNVRKKEQQRNSQQRQQKPAASDDKPKERLVTYTSRVTSILDNARRKIFVACDTYFKEKGDRPVLRRDRIDDSREGYLFIINNKLDQIRSKTETFRNDALGEFRSQLRRFLKILHQIPDIAYADVMASIVAMASQQRQNQSISFDVRWREWAESK # PASA_UPDATE: g6653.t1, single gene model update, valid-1, status:[pasa:asmbl_1621,status:3], valid-1 NODE_1449_length_11207_cov_53.1332 . gene 8680 9947 . - . ID=g6653;Name=g6653.t1 NODE_1449_length_11207_cov_53.1332 . mRNA 8680 9947 . - . ID=g6653.t1;Parent=g6653;Name=g6653.t1 NODE_1449_length_11207_cov_53.1332 . five_prime_UTR 9805 9947 . - . ID=g6653.t1.utr5p1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . exon 9654 9947 . - . ID=g6653.t1.exon1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . CDS 9654 9804 . - 0 ID=cds.g6653.t1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . exon 9471 9530 . - . ID=g6653.t1.exon2;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . CDS 9471 9530 . - 2 ID=cds.g6653.t1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . exon 9226 9329 . - . ID=g6653.t1.exon3;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . CDS 9226 9329 . - 2 ID=cds.g6653.t1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . exon 8680 9116 . - . ID=g6653.t1.exon4;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . CDS 9024 9116 . - 0 ID=cds.g6653.t1;Parent=g6653.t1 NODE_1449_length_11207_cov_53.1332 . three_prime_UTR 8680 9023 . - . ID=g6653.t1.utr3p1;Parent=g6653.t1 #PROT g6653.t1 g6653 MSKKPTSGRNDREEKKEVNITHQNAIFAETIHKQQAHFQLYTTYSPNPNTTVFLTGKPNTVYDQIDGKEDTDFLEKSERKHKPPQEKFSEPQTHAQEYGWIHKPLIDQRRKDPRLSHPMKKSDVSTYMAAVFSKK* # ORIGINAL: g3609.t1 original gene structure, not modified by PASA NODE_485_length_22742_cov_39.7551 AUGUSTUS gene 17449 21020 . + . ID=g3609;Name=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS mRNA 17449 21020 . + . ID=g3609.t1;Parent=g3609;Name=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 17449 17670 . + . ID=g3609.t1.exon1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 17449 17670 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 17880 17996 . + . ID=g3609.t1.exon2;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 17880 17996 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 18346 18418 . + . ID=g3609.t1.exon3;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 18346 18418 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 18550 18653 . + . ID=g3609.t1.exon4;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 18550 18653 . + 2 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 18858 18944 . + . ID=g3609.t1.exon5;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 18858 18944 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 19103 19237 . + . ID=g3609.t1.exon6;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 19103 19237 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 19613 19690 . + . ID=g3609.t1.exon7;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 19613 19690 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 19797 19911 . + . ID=g3609.t1.exon8;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 19797 19911 . + 0 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 20104 20232 . + . ID=g3609.t1.exon9;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 20104 20232 . + 2 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 20401 20592 . + . ID=g3609.t1.exon10;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 20401 20592 . + 2 ID=cds.g3609.t1;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 20905 21020 . + . ID=g3609.t1.exon11;Parent=g3609.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 20905 21020 . + 2 ID=cds.g3609.t1;Parent=g3609.t1 #PROT g3609.t1 g3609 MEFSVAFKQSSGLVAFSPDGRRLAACLQHRLIVRDAQSLQIAHIFTCVDNVNQIEWSSDSAFVMCAIHRRGVIQVWCVDQPSWTCKIEEGLAGLAHARWAPDCRHVLSTADFQLRLTVWSLANKTASYIKMPKHAGHGLEFTHDGSYLVVALRREGTDHLAVYATDTWQQVTSFIVDTTDLADISISNDDSAISVWDSPLDYKVSLYSIDGRPLGSFCAYEDALGIKSVTWAPCSKFLCVGSYDEKLRVLNHVTWRSIVDISHPTSVDSRRTMSQNVLFPHFIFGLSLQPIFIETEQTAATESGVATRSTFNCATTGHVAFPCAKMDPERASPPVGISLVAFSADSRHIASRNDRTPHVVFLYDLINARQQSAIQFSSHVRHFAWDPIRPRLDVATASSNVYFWEPEGVTCIHVPADETFRPSQLAWSADGSALSMWDKDRFCVCYPGDDLATAS* # ORIGINAL: g3608.t1 original gene structure, not modified by PASA NODE_485_length_22742_cov_39.7551 AUGUSTUS gene 16314 17042 . + . ID=g3608;Name=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS mRNA 16314 17042 . + . ID=g3608.t1;Parent=g3608;Name=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 16314 16470 . + . ID=g3608.t1.exon1;Parent=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 16314 16470 . + 0 ID=cds.g3608.t1;Parent=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 16622 16664 . + . ID=g3608.t1.exon2;Parent=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 16622 16664 . + 2 ID=cds.g3608.t1;Parent=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 16835 17042 . + . ID=g3608.t1.exon3;Parent=g3608.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 16835 17042 . + 1 ID=cds.g3608.t1;Parent=g3608.t1 #PROT g3608.t1 g3608 MLIRELVEALRIRNKSVYLVSGGFRQMIAPVAQLLGLEEGCVYANRLLFADDGSFAGFDHAEPTSRSGGKAVVAQLLKERHGSVAVVGDGVTDMEAKPPADLFVGFGGNVVRDAVRTGADLFVLDFAELVAGLDA* # ORIGINAL: g3607.t1 original gene structure, not modified by PASA NODE_485_length_22742_cov_39.7551 AUGUSTUS gene 6586 14810 . - . ID=g3607;Name=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS mRNA 6586 14810 . - . ID=g3607.t1;Parent=g3607;Name=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 14737 14810 . - . ID=g3607.t1.exon1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 14737 14810 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 14426 14552 . - . ID=g3607.t1.exon2;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 14426 14552 . - 1 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 13945 14307 . - . ID=g3607.t1.exon3;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 13945 14307 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 12957 13715 . - . ID=g3607.t1.exon4;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 12957 13715 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 12043 12627 . - . ID=g3607.t1.exon5;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 12043 12627 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 11282 11788 . - . ID=g3607.t1.exon6;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 11282 11788 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 9633 10970 . - . ID=g3607.t1.exon7;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 9633 10970 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 7082 9470 . - . ID=g3607.t1.exon8;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 7082 9470 . - 0 ID=cds.g3607.t1;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 6586 6758 . - . ID=g3607.t1.exon9;Parent=g3607.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 6586 6758 . - 2 ID=cds.g3607.t1;Parent=g3607.t1 #PROT g3607.t1 g3607 MLRAFQAAASLGARVPRRHALNANRAFVHATRQSSTATSPAGASKTGLYDASLEKDSCGVGFVVNVKGRPSRQIVEDADVILRNMAHRGACGCETNTGDGAGVMTGIPHEYYAQIARKELGVELPPAGGYATGLIFLNPNEYVREESQEVFGRIAGECGLDVLGWRQVPSDNSMIGPTAKSKEPFIAQVFVAPPRSGSAVGEDEVRRRAYMLSKRATNAIPKETWFFVCSLSTSTVTYKGQLTTEQLYDYFPDLRSPSFSSHFALVHSRFSTNTFPSWDRAQPLRYIGHNGEINTVRGNRNWMRAREGVMRSSRYNEAELRGMYPVVEDGGSDSMMLDNVLEFMLVAGNKTLPEAMMMLVPEAWENDPVMDARKRALYEHSSFLMEPWDGPANFAFSDGRYIGGVLDRNGLRPSRYYVTTDDRVVAASEVGVLSIPDRLIKSKGRLQPGRMFLIDTKEGTIVGDAELKQRVSSKHPYREWVDSESIKLANISKKAAQSDGPLLNTARGDLVADPRLPQYGYTMEHVTMLLQPMLETGKEALGSMGNDAPLACLSNAPRIVPEYFKQHFAQVTNPPIDPFREAVVMSLRCAVGPMANLLETGPNQARRLVLEQPVLTRADLAAIKNIDKHVPGWKTKVVDITFPRSAGEQGYLDAVDRACREVSDAIASGHQFAVLSDATSSAERVPASALVALGAVHQHLVRNKQRLQIGLVVETGEAREVHHHCTLIGFGADAVCPYLVYDIAERVIAEGRMETVKDLTIETATKNYIKSLQTGMMKVMAKMGISTLQGYKGAQIFEAVGVGSDVMDKCFSGTASRIGGIDFAVIAKEALARHDLAYPGRFAAVATLALPNPGDYHWRDGGEQHMNSPAAIANLQDAARRKNKRAYDDFVRSQQLAIRDCTLRGLFEFDPAQRQAVPIAEVETAQAIVRRFVTGAMSYGSISLEAHTTLAAAMNEIGGKSNTGEGGEDPSRYAATKGAPNLRSAIKQIASGRFGVTIGYLSNADELQIKMAQGAKPGEGGELPGHKVSDSIAKTRHSTAGVGLISPPPHHDIYSIEDLSQLIFDLKCANPSSRISVKLVSEAGVGVVAAGVAKGHAEHILISGHDGGTGASSWTGIKHAGLPWELGLAETHQTLVLNDLRGRVVLQTDGQLRTGRDVVLAALLGAEEFGFSTAPLIALGCTMMRKCHLNTCPVGIATQDPELRKKFEGQPEHVVNYLFMVAEEVREHMARLGFRTFNEMVGRSDLLRANMEGRSEKLRNLDLSAVLTPAFTLRKGAATHCVTKQDHALDAPTRIDNEIIRRALASIADGGATKTVIDMPVTNINRVVGTTLSHEIAKAHGEAGLPDDSIRIRLRGTAGQSLGAFLAKGVTIELEGDANDYVGKGLSGGTVIVRPGEYADGFRPQDNIIVGNVCLYGATSGKAFIRGVTAERFCVRNSGATAVCEGVGDHGCEYMTGGRVVILGGVGRNFAAGMSGGIAYVLDPAGAFRCNPELVRLGKVEDAEETEWLRETVAEHGRVTGSTVAADLLASWPQSVGQFVRVMPIDYERVLVAAKAAKAAEAAKVEPAVAAPPAAVASASAAEQDGVFDKVHGFMKYERVKPKLRDAAARLKDFEEIATPAAEADVRKQASRCMDCGVPFCQSGSGCPIGNIIPKWNDLVHRGRWQEAYDQLALTNNFPEFTGRVCPAPCEGACVLGINSDPVAIKSVEVSIIDHAFEKGWVVPRPPSVRTGQRVAVIGSGPAGLAAADQLNRAGHTVTVYERADRIGGLLMYGIPNMKLDKRIVQRRVDVLAAEGISFVTNAHVGETIDPLQLVSENDAVIVAVGSTWPRDLPVPGRDAKGIHYAMDFLTPSTKRVVSEWDAKREGTVQPGETIDVKGKDVVVIGGGDTGVDCMATALRQGAKSVRNFEINLKPGERRTADNPWPNYPRVLRNEYGHAEAVARDGKDPREFATMTKEFLADSKGRVAGVSATQVRWLRDVAGNWHMEEVEGSEQLFKADVVLLALGYTGPESALAKQLGLATDARSNLRTVGGGHSTASKKIFIAGDCRRGQSLIVWAIREGRAAAREVDIALMGQTSLPVSGGVVIPQVRSQSRDKRFAVGN* # PASA_UPDATE: g3610.t1, single gene model update, valid-1, status:[pasa:asmbl_7675,status:12], valid-1 NODE_485_length_22742_cov_39.7551 . gene 21297 22718 . - . ID=g3610;Name=g3610.t1 NODE_485_length_22742_cov_39.7551 . mRNA 21297 22718 . - . ID=g3610.t1;Parent=g3610;Name=g3610.t1 NODE_485_length_22742_cov_39.7551 . exon 22609 22718 . - . ID=g3610.t1.exon1;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . CDS 22609 22718 . - 0 ID=cds.g3610.t1;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . exon 22247 22407 . - . ID=g3610.t1.exon2;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . CDS 22247 22407 . - 1 ID=cds.g3610.t1;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . exon 21974 22107 . - . ID=g3610.t1.exon3;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . CDS 21974 22107 . - 2 ID=cds.g3610.t1;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . exon 21297 21813 . - . ID=g3610.t1.exon4;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . CDS 21544 21813 . - 0 ID=cds.g3610.t1;Parent=g3610.t1 NODE_485_length_22742_cov_39.7551 . three_prime_UTR 21297 21543 . - . ID=g3610.t1.utr3p1;Parent=g3610.t1 #PROT g3610.t1 g3610 MHRLIAAHPSFTTGDVASALKEAFVIEDEVVLSEVNRFGKKKGGSTATVVVVTDTDVWVANVGDSSAVLARRVDEDHVRLMEISRDHKPDDPDESARIEAAGGKVDERGRITSHGESINMSRALGDPFHKAPMNESDADFISPIPTVNRHTVRPDHEFVVLASDGLWNFMDKEGNVALVVCCNTRPTSASKPILKLTLLTPHIWPHAHPRTPMQKSYALWPHSR* # ORIGINAL: g3606.t1 original gene structure, not modified by PASA NODE_485_length_22742_cov_39.7551 AUGUSTUS gene 581 5765 . + . ID=g3606;Name=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS mRNA 581 5765 . + . ID=g3606.t1;Parent=g3606;Name=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 581 619 . + . ID=g3606.t1.exon1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 581 619 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 714 760 . + . ID=g3606.t1.exon2;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 714 760 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 896 962 . + . ID=g3606.t1.exon3;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 896 962 . + 1 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 1149 1287 . + . ID=g3606.t1.exon4;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 1149 1287 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 1421 1499 . + . ID=g3606.t1.exon5;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 1421 1499 . + 2 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 1729 1842 . + . ID=g3606.t1.exon6;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 1729 1842 . + 1 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 2042 2486 . + . ID=g3606.t1.exon7;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 2042 2486 . + 1 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 2748 3161 . + . ID=g3606.t1.exon8;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 2748 3161 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 3422 4357 . + . ID=g3606.t1.exon9;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 3422 4357 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 4549 4710 . + . ID=g3606.t1.exon10;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 4549 4710 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS exon 4998 5765 . + . ID=g3606.t1.exon11;Parent=g3606.t1 NODE_485_length_22742_cov_39.7551 AUGUSTUS CDS 4998 5765 . + 0 ID=cds.g3606.t1;Parent=g3606.t1 #PROT g3606.t1 g3606 MEAQGRHQQDGVEDVFEINDFTCASPWESFVADIEAALRLWGLADSGGDRRSNSASPTASGTPVHPCEAVVWCGDRQFLLAHHRRDTHRDVPVHRTAGELPAYMSCMMDASSDFHATTHPIETWFGASEFLVLSPSSDGPVGRSAVPVLLGSLSLAAGAVGCCLPLFVQLSESHARGPLVFGAASAPHGAGTGTVRTDYECVRLPSVPRSCAHVAGLIDVFRSKIGDSRLDGVADDVAARGIDVSVRFTYFGVRDPFASDAFVRRDTGDPPPSSSPIAPASFMAGATDRGMMMMRDPRRKHALSPIVQGEPELNWGLRGDPVGQMHLCVAWPSFAEDAIVDNAIYSELDPIAAPVWSLRVLPSNPQPTGRLADAVGRYVACCACDVDFDSLRVNADRSALSAAAAAMSASAARDSGASSPPPSGAGDSRAGKDALRALTDPSSRMIPKVVGRSVSALSSSVGHMTSLVTASVDRAISSLVDGEGEPPRMEDIERVFADLFSDDPDSQDSPESAGDGVTPDARRWDALARRLKAAPADTLTHLLAVYLCRVGRRHGGMRGVALFWTEFLREIRWHWESLTLLPRMSGGDGHNEGRPALPDMSLCVLHQKLQMLNCCIHSKMLRDAARERISCSRSNSDATAPQNDDEDNDEFFEAAQDESEWGEWPDASPGGQASPSSPGRPQPPPATGPEGVVQTHETLRILGSGEPLGIPATQEAGPMTEDMVHDQAEVFARLDASGDGAAIRARMQAASLLSDMEAFKAANPSSSLADFVRWHSPRDWVLSANDLSPCPDESGVLSARMSCPGNLWAEVWAQARPIPANRQRPLFDCTREAEKVLHFLESLSVGAVHRMLLPSVVLAAFRTLHSADVLQQTQLRQRDGHATARDIRGTSSTGGDRGSDNDSSLSVAARAIAAAMDSVPAALDAAGEQTPFGALLPLSECEALLGAQASLGDRLPGQRRLVAALLESDEAHVATSAEREAVAAVFVRAGWAAGGGNDVARGDDASSLGSANAAGGDFGVPDVRECVLRAVSPRPSGVSQPVAHRLYCGAMPGGEFRLAGAISRDGLFR* # ORIGINAL: g8532.t1 original gene structure, not modified by PASA NODE_727_length_18446_cov_42.9434 AUGUSTUS gene 14080 17408 . + . ID=g8532;Name=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS mRNA 14080 17408 . + . ID=g8532.t1;Parent=g8532;Name=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 14080 14128 . + . ID=g8532.t1.exon1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 14080 14128 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 14310 14385 . + . ID=g8532.t1.exon2;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 14310 14385 . + 2 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 14688 15135 . + . ID=g8532.t1.exon3;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 14688 15135 . + 1 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 15450 15602 . + . ID=g8532.t1.exon4;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 15450 15602 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 15986 16167 . + . ID=g8532.t1.exon5;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 15986 16167 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 16352 16397 . + . ID=g8532.t1.exon6;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 16352 16397 . + 1 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 16605 16742 . + . ID=g8532.t1.exon7;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 16605 16742 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 16926 17075 . + . ID=g8532.t1.exon8;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 16926 17075 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 17343 17408 . + . ID=g8532.t1.exon9;Parent=g8532.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 17343 17408 . + 0 ID=cds.g8532.t1;Parent=g8532.t1 #PROT g8532.t1 g8532 MGNFLVVGPNEGLAVSGGCRNETEITIGGWAWAWWGCSNVERLSLEVMTLNPHCDCVETKEGPALTVTGVAQVKFLTEDKLLRTAMEQFLGKSTAQIQEVLVQTLDGHLRAILGTLTVEEIYQDREKFAALVREVASPDVGKMGVEILSFTIKELRDNIGYLSSLGKKKTAEVRRDADIGVALATRDAGIKESEAFRATMEVKYVADTAIADSDRLFLVQKAIFNQEVNTKIASAELAYDLEAAKVRQAIKAEDVQIQVVERRKAIEVEEQEIKRKENELIAVIRKPADAERFKMETIASAAKTKIVAEAHAEAEAIKLIGEAEASAIAARGNAEAEGMRMKAEAYRRFGDAALMSMVLETLPKIAAEIAAPLSKVEKIVMVDGAGNNATGDIIQLAAQLPPALQALTGTDLNKVLQALAGKATGKAPAAATASS* # PASA_UPDATE: g8529.t1, single gene model update, valid-1, status:[pasa:asmbl_9080,status:12], valid-1 NODE_727_length_18446_cov_42.9434 . gene 8485 9756 . - . ID=g8529;Name=g8529.t1 NODE_727_length_18446_cov_42.9434 . mRNA 8485 9756 . - . ID=g8529.t1;Parent=g8529;Name=g8529.t1 NODE_727_length_18446_cov_42.9434 . five_prime_UTR 9685 9756 . - . ID=g8529.t1.utr5p1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . exon 9647 9756 . - . ID=g8529.t1.exon1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . CDS 9647 9684 . - 0 ID=cds.g8529.t1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . exon 9328 9456 . - . ID=g8529.t1.exon2;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . CDS 9328 9456 . - 1 ID=cds.g8529.t1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . exon 9069 9156 . - . ID=g8529.t1.exon3;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . CDS 9069 9156 . - 1 ID=cds.g8529.t1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . exon 8485 8788 . - . ID=g8529.t1.exon4;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . CDS 8672 8788 . - 0 ID=cds.g8529.t1;Parent=g8529.t1 NODE_727_length_18446_cov_42.9434 . three_prime_UTR 8485 8671 . - . ID=g8529.t1.utr3p1;Parent=g8529.t1 #PROT g8529.t1 g8529 MSNYVGIKFCQECNNMLHPREDRVNRVLMYCCKNCAYEETAESSCVFVNRIQHTQDELTQIITDVTSDPTLPRTRDQSCPKCGHEELVFFQSQMRRSDEGMQLYYVCCNNDCKYRWVERGEES* # PASA_UPDATE: g8527.t1, single gene model update, valid-1, status:[pasa:asmbl_9079,status:12], valid-1 NODE_727_length_18446_cov_42.9434 . gene 177 3160 . - . ID=g8527;Name=g8527.t1 NODE_727_length_18446_cov_42.9434 . mRNA 177 3160 . - . ID=g8527.t1;Parent=g8527;Name=g8527.t1 NODE_727_length_18446_cov_42.9434 . five_prime_UTR 3117 3160 . - . ID=g8527.t1.utr5p1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . exon 2949 3160 . - . ID=g8527.t1.exon1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . CDS 2949 3116 . - 0 ID=cds.g8527.t1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . exon 2556 2698 . - . ID=g8527.t1.exon2;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . CDS 2556 2698 . - 0 ID=cds.g8527.t1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . exon 2281 2367 . - . ID=g8527.t1.exon3;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . CDS 2281 2367 . - 1 ID=cds.g8527.t1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . exon 634 2144 . - . ID=g8527.t1.exon4;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . CDS 634 2144 . - 1 ID=cds.g8527.t1;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . exon 177 410 . - . ID=g8527.t1.exon5;Parent=g8527.t1 NODE_727_length_18446_cov_42.9434 . CDS 177 410 . - 2 ID=cds.g8527.t1;Parent=g8527.t1;3_prime_partial=true #PROT g8527.t1 g8527 MSASPADALLRAPKADVSEAAERDWSANGRSKVWVWKNGAYAAASVVERGDDGNVKVQFETGDSATIGEEQAERMNHPRLCTVENLTDLDAVNVASSVHLLQQRYTAGLVHTFAGNGLIVVNPHKDLPIYGDSVMPLFRCPLDAMPPHIYAVAESAYRSAVTEASRRVVIFTGEVGSGKTHSFARAVHYIASVAVGSTRAKKGAKSDSASASSSSSSSPASSVRTLLSSAIEPIFAAFASARTPRSPNSSRAGRMFTLEFDGAGGLVGANVQCFAFERSRLTHSPEGERTFDALYQIVRASERELHGLPTDSGVEKAASSCRYLNGANADASDGARWKDTDTALASIGLGEEERKALWSILAAIVHLGCLVPKAGSAATSFESDAPLQAAARLLGVPAADLASAILTQVPRSPSKDALCAAVDTLSRGLYERVVLQLIAQMNSAVQSRVEQRSSVSLIDYGGFDGRCDASSSPDAHARMCANALAEKLRAIHHSKSLVEPQAEYGTAGISWAEIDFGVSPSAAASDAIFASVFPALEEESQSVGDSSNTDGLLLRVAKTLPATSSASIGASGVALAVAHAGGCTVEYGVDVSFLDCDRGALSPQVLQALSLSSKHALAELFQTVPQASLAFRRIGGAGASSASALPSVRSGGARNRSLAMQQRESVEALAAFLGDIRPALLSFVHCLSPNTSGRGGGFDHASLRRCLKADNILE # PASA_UPDATE: g8530.t1, single gene model update, valid-1, status:[pasa:asmbl_9082,status:3], valid-1 NODE_727_length_18446_cov_42.9434 . gene 10141 12061 . + . ID=g8530;Name=g8530.t1 NODE_727_length_18446_cov_42.9434 . mRNA 10141 12061 . + . ID=g8530.t1;Parent=g8530;Name=g8530.t1 NODE_727_length_18446_cov_42.9434 . five_prime_UTR 10141 10189 . + . ID=g8530.t1.utr5p1;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . exon 10141 10766 . + . ID=g8530.t1.exon1;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . CDS 10190 10766 . + 0 ID=cds.g8530.t1;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . exon 10910 11395 . + . ID=g8530.t1.exon2;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . CDS 10910 11395 . + 2 ID=cds.g8530.t1;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . exon 11582 12061 . + . ID=g8530.t1.exon3;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . CDS 11582 11709 . + 2 ID=cds.g8530.t1;Parent=g8530.t1 NODE_727_length_18446_cov_42.9434 . three_prime_UTR 11710 12061 . + . ID=g8530.t1.utr3p1;Parent=g8530.t1 #PROT g8530.t1 g8530 MASRAGIFIVAAKRTAFGTFGGKLKHLTATDLAVDASKAAFASANIRPDIVDSVIVGNVAQTSSDAAYLSRHVGLRSGVGIPSTALTVNRLCGSGFQSVINGAQEILAGDASVVLAAGTENMSQAPYAVRDVRFGTRLGQEIKQEDTLWSALTDSYVKLPMAITAENLAEKYKISRADVDGYALQSQQRWAKAEAEGRFNAEIAPIELKGKKGPELFKTDEHARPQTTLESLGKLPPVFKKDGVVTAGNASGISDGAGAIVIASEAAIKQHGLKPLARLVSWHVSGCDPKIMGIGPVAAITGALHKAGLKISDIDLVEINEAFAAQYLACEKELGLNRDRTNTNGGAIALGHPLGASGSRITAHLVHELARLNKKYAVGSACIGGGQGIALVLERV* # PASA_UPDATE: g8533.t1, single gene model update, valid-1, status:[pasa:asmbl_9081,status:12], valid-1 NODE_727_length_18446_cov_42.9434 . gene 17998 18446 . - . ID=g8533;Name=g8533.t1 NODE_727_length_18446_cov_42.9434 . mRNA 17998 18446 . - . ID=g8533.t1;Parent=g8533;Name=g8533.t1 NODE_727_length_18446_cov_42.9434 . five_prime_UTR 18446 18446 . - . ID=g8533.t1.utr5p1;Parent=g8533.t1 NODE_727_length_18446_cov_42.9434 . exon 17998 18446 . - . ID=g8533.t1.exon1;Parent=g8533.t1 NODE_727_length_18446_cov_42.9434 . CDS 18254 18445 . - 0 ID=cds.g8533.t1;Parent=g8533.t1;5_prime_partial=true NODE_727_length_18446_cov_42.9434 . three_prime_UTR 17998 18253 . - . ID=g8533.t1.utr3p1;Parent=g8533.t1 #PROT g8533.t1 g8533 LPPSLSPSAQAIQILGGMGYVSDMPAERFYRDARITEIYEGTSEIQRIVIAGRVVKELSGAAN* # ORIGINAL: g8528.t1 original gene structure, not modified by PASA NODE_727_length_18446_cov_42.9434 AUGUSTUS gene 3645 8385 . + . ID=g8528;Name=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS mRNA 3645 8385 . + . ID=g8528.t1;Parent=g8528;Name=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 3645 7127 . + . ID=g8528.t1.exon1;Parent=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 3645 7127 . + 0 ID=cds.g8528.t1;Parent=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 7439 7759 . + . ID=g8528.t1.exon2;Parent=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 7439 7759 . + 0 ID=cds.g8528.t1;Parent=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 7981 8385 . + . ID=g8528.t1.exon3;Parent=g8528.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 7981 8385 . + 0 ID=cds.g8528.t1;Parent=g8528.t1 #PROT g8528.t1 g8528 MAATNMAASIASPRAAIAHALEPSLFLAANGRACEPPQIALSRADAMIAEREKAGAMRVDADAADSPIHDGMRIEPPKEGGPLPSAAVLLRAAMHARCVVGKRILLPDKVARIFAADVILSRWDALFQEYRAGGGTTTKPPFDAAWSVHMATGFLAPPISAEAVFVLVCLVGVSEECVQLVASYPHATAVALASSLVRASERWRHWRMQQPEKIPDLVDGDLDALDNCALFCKSLEMILSSSPSPKARAASTEMHAAPDTPTDRIAALVGPLLLPLSMADSFHVDGCERERVDSVDAWISRAATCARRASMSPWEKHATASVLRMIDYHPRDDSDRDGVDRGHLPPSIKALLLGVLHAEAGCVAAIATPNKRQTRMTTSGDAGLFMQTCRAAVAGCGGWLPGDAPFGSECGGKGSFGASVAGRAPIYPPAAARESLLSLLADANETFRCQESLPFFLYANRSRWHASSDVGIGFVRVIVWARQQWIACQEHQQQQQQQQQQPCPQNDGALKSLSVTHSQLTSLFNACAHALLDAYMRMHTGCQALVASRAYEALAGTGADPTTESLFTWPPLAGTTSAAMPASVSSLPSTTATYTSSFATEGIGSVPKFDVSTAVGERMTTAFVRVVVTRGIGDPDGVTLCDSSIAAFAGLVLLSPWAALQRAVHEAVSNKGHAPVVEALLRSSPHVTFFGVPGVNSTALSLAGDSKGKKRVADVDHARVDTKRRKVGTDLAASVGEVSVDSGTPNREEESRGPLVCLAIAMRCFSHFGGNNEASALDFDGDGVVALVEHLFSGRSLRTSRSSDKSCLRLNLEVENGSSSPYMAELTRGVKDVDFCRRLDNRIGTAALVDPSDLQVHVINPVLSATVAFTTSAHPPSATDVDSDCGDATDEWTSSISLALRFSLLALRTVRARLHTVHAHGAAGAADVETTDRHRCPLEACDSFLRNLPETMQLLLQLTFTQIASMNDGPGMPRISINGRLADMLSECTHASVDVFAAASLHTVSCRCRPSLKGDFQDDWRTNFAWYERTAVQLNASARSMHWSLALPLVPFLQAVEYGRGRAHATRTSASNLRVALPRPLAVLCGVVGGDGDDLVDAAESAMGHDESLFSAQFYACDDDEVCGPHRESEVGGASPVVRLLATWMTSVSMAPDAVAHALSRSTSAGLRRILEFALPAVEAKTARAMRLWLMRVLNADTTSIESQDKTALVDEGRQALVSLVSRMGMCCMLVVAVARYAVDGCVEGQRGVMHAAFSPSAIVRVVCVHAKRTRSSRTLVVQCVSSVVGAMNGLKNVEEKCKQSAADNAEEGKTYAHILRLSDDLKAAGEAVFVLALDIAGSISGKAESKSASNGVETVASIESVDGVNIASTDFIAPLSDVLRKVASSEHREALLATLTRESTV* # ORIGINAL: g8531.t1 original gene structure, not modified by PASA NODE_727_length_18446_cov_42.9434 AUGUSTUS gene 12382 13574 . - . ID=g8531;Name=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS mRNA 12382 13574 . - . ID=g8531.t1;Parent=g8531;Name=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 13355 13574 . - . ID=g8531.t1.exon1;Parent=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 13355 13574 . - 0 ID=cds.g8531.t1;Parent=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 12897 13233 . - . ID=g8531.t1.exon2;Parent=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 12897 13233 . - 2 ID=cds.g8531.t1;Parent=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS exon 12382 12766 . - . ID=g8531.t1.exon3;Parent=g8531.t1 NODE_727_length_18446_cov_42.9434 AUGUSTUS CDS 12382 12766 . - 1 ID=cds.g8531.t1;Parent=g8531.t1 #PROT g8531.t1 g8531 MVTAEGNDGRVPSDGSSETLDQKLSPPDSLAHRMKEFTIAYLRKFKGTAHKLHPFPKRPTIRVLVSTFVASFCGIIVVAAINDKAPHFADGDYVMFIASFGASSALVHGAIDSPLAQPRNAIGGSVLSAFVGVCLAKAFRSCPEYNFIAVALAVAISLNVMQLTRTFHPPGGATSAIAIVGSAKIQNLGFLYLIFPVLIGECLLVFIALLINNCAREYPLYWYRPKKRLLTNAPQDTLVPSVGAIERHIAASQFAREHDAATTAGHSERTSEQPHDGIGSGSVVGRVENANDFEIEMADVEREASADEKSWIE* # ORIGINAL: g238.t1 original gene structure, not modified by PASA NODE_1870_length_8813_cov_39.5515 AUGUSTUS gene 4602 8734 . + . ID=g238;Name=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS mRNA 4602 8734 . + . ID=g238.t1;Parent=g238;Name=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 4602 5522 . + . ID=g238.t1.exon1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 4602 5522 . + 0 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 5746 6026 . + . ID=g238.t1.exon2;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 5746 6026 . + 0 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 6281 6428 . + . ID=g238.t1.exon3;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 6281 6428 . + 1 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 6765 7122 . + . ID=g238.t1.exon4;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 6765 7122 . + 0 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 7590 7748 . + . ID=g238.t1.exon5;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 7590 7748 . + 2 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 7986 8155 . + . ID=g238.t1.exon6;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 7986 8155 . + 2 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 8476 8630 . + . ID=g238.t1.exon7;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 8476 8630 . + 0 ID=cds.g238.t1;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS exon 8716 8734 . + . ID=g238.t1.exon8;Parent=g238.t1 NODE_1870_length_8813_cov_39.5515 AUGUSTUS CDS 8716 8734 . + 1 ID=cds.g238.t1;Parent=g238.t1 #PROT g238.t1 g238 MVDQKRRVRVYRLNGKEAWIDSGTGHVSCINVERLGGTSILVRSEEDGRLLIESRIVADDIYQLQQDTLIVWREPDTGENLALSFQDRNGCSAVWDRLVAVQKKIAAKRDMPPSPQLTGTGHPQPHSNDPNKLRMEPGEAMIGAGEPSLSETDDSDIVGPHPAPIAPVSIIEHVDDAGMSLDEGDDSSSSVFPPCELANLKEISSVLMSVNSLHRRDRVATAVLQEGFLPKLIDLFRVNEDLENVEDLHVMFDIAKGLIMLNESSVLDHVLRNEVILDVIGMLEYDAGLKEKQGHREFLTKTALFKEAVPIRDPVVISRIHQTFRVQYIKDVVLPRILDDSTFASLNSLIFFNHIDIVRRLKDNDAFLTELFEKANADTTTVEERRDVMQFLQEFTGLARSLLVDDRNDLYKTLSDHGLFQLLLRALAEHEPRTQLSAIEVLTHILQHDSSLIRTFMLAERKAREFLPEKRSEQTLASIITDRFLRDEDGGVRGQLTDCFRTLLDSVSMGDSPQKTEFLNLFYEECMPSLVAPVASAAVTYRKTHKESGGGDVEGDGGVAPELFISIDMDKEDDANLISQVIDVLSYCILHHSYHIKNHIIRNHVAKDVVVMMRSKHSHLVLSAIRFLRTVIGMRDEFYNRQIIKHSLLGPVMEVFVKHKDRYNLLNSAVLDLIVYVRQENIKSLVAHICETYAELFRDVKYVDCFEALMLKHMQNSESALNGTVQMEVDRCLFSV* # PASA_UPDATE: g237.t1, single gene model update, valid-1, status:[pasa:asmbl_2859,status:12], valid-1 NODE_1870_length_8813_cov_39.5515 . gene 147 3133 . - . ID=g237;Name=g237.t1 NODE_1870_length_8813_cov_39.5515 . mRNA 147 3133 . - . ID=g237.t1;Parent=g237;Name=g237.t1 NODE_1870_length_8813_cov_39.5515 . five_prime_UTR 3111 3133 . - . ID=g237.t1.utr5p1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 2960 3133 . - . ID=g237.t1.exon1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 2960 3110 . - 0 ID=cds.g237.t1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 2343 2415 . - . ID=g237.t1.exon2;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 2343 2415 . - 2 ID=cds.g237.t1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 1778 1943 . - . ID=g237.t1.exon3;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 1778 1943 . - 1 ID=cds.g237.t1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 1249 1521 . - . ID=g237.t1.exon4;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 1249 1521 . - 0 ID=cds.g237.t1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 629 1038 . - . ID=g237.t1.exon5;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 629 1038 . - 0 ID=cds.g237.t1;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . exon 147 274 . - . ID=g237.t1.exon6;Parent=g237.t1 NODE_1870_length_8813_cov_39.5515 . CDS 147 274 . - 1 ID=cds.g237.t1;Parent=g237.t1;3_prime_partial=true #PROT g237.t1 g237 MTDARRERGAERNLIEDETIAFETSKDVDVVNSFDQMGLREDLLKGIYFYGFKKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISMLQCLDIQTRETQALVLSPTRELAQQIQKVVLALGSHMNVQCHAAIGGTSRDADAKKLEYGQHIVSGTPGRVLDMIRQRHLRTRSIKMLVLDEADEMLSKGFKEQIYDVYRYLPPATQVVIVSATLPHDVLEMTGKFMTEPIRILVKRDELTLEGIKQFFVAVEREEWKFETLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGDMLQKEREAIMQEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDVRILRDIEQYYSTQIDEMPMN # ORIGINAL: g5374.t1 original gene structure, not modified by PASA NODE_1173_length_13388_cov_40.6683 AUGUSTUS gene 5449 6035 . + . ID=g5374;Name=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS mRNA 5449 6035 . + . ID=g5374.t1;Parent=g5374;Name=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 5449 5451 . + . ID=g5374.t1.exon1;Parent=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 5449 5451 . + 0 ID=cds.g5374.t1;Parent=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 5649 5752 . + . ID=g5374.t1.exon2;Parent=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 5649 5752 . + 0 ID=cds.g5374.t1;Parent=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 5909 6035 . + . ID=g5374.t1.exon3;Parent=g5374.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 5909 6035 . + 1 ID=cds.g5374.t1;Parent=g5374.t1 #PROT g5374.t1 g5374 MVESIAYFGPVSPSLYPLLSLTLLGIGIILTGFFFVYELSSNKFNRSLVKELFISLLASVFLGFGVLFLLLWAGIYV* # PASA_UPDATE: g5372.t1, single gene model update, valid-1, status:[pasa:asmbl_646,status:12], valid-1 NODE_1173_length_13388_cov_40.6683 . gene 71 1677 . + . ID=g5372;Name=g5372.t1 NODE_1173_length_13388_cov_40.6683 . mRNA 71 1677 . + . ID=g5372.t1;Parent=g5372;Name=g5372.t1 NODE_1173_length_13388_cov_40.6683 . five_prime_UTR 71 71 . + . ID=g5372.t1.utr5p1;Parent=g5372.t1 NODE_1173_length_13388_cov_40.6683 . exon 71 1677 . + . ID=g5372.t1.exon1;Parent=g5372.t1 NODE_1173_length_13388_cov_40.6683 . CDS 72 1541 . + 0 ID=cds.g5372.t1;Parent=g5372.t1;5_prime_partial=true NODE_1173_length_13388_cov_40.6683 . three_prime_UTR 1542 1677 . + . ID=g5372.t1.utr3p1;Parent=g5372.t1 #PROT g5372.t1 g5372 AKPPRRQINHRAQSSNGGFVAQHADGSPFVGGATTQTTALGATGTITVFADQEETVQGEYTHGLCACTEECDICCCTDLAFPFIMGKAAGGVDPGGIGAFDWLLFVFSIICVPCIPRWMLRERVKSKYGIEESMAVSVCKVCCCGTCATVQDVREAKAHGDWDLRHGVVSEDGSVTETAYTHKLGDCCGDPEACVLTCCGCSSCLIGKAGGDVEGGPFDIFLCCISLFVPWLGAFLLRERVKRRLQIGEKFLDTLRTLYCCMSCGIIQDIREVKARGLASKVNSINLSATASRYGVHVTASQQQQPQQPTVYAAPAGGFVQQQPSYTPQPQYQGQPQPQPQYQVAAQPPPQHAYQAQPGAQPQPVTQPLFVYYQPPPPAQDASGEQPVAQAPQFAQYQPAPTPQPQFVYAQPPAHPGVQPQFVYAQPPIAHPGVHLQPQPQIVYYQLPPGAQLPPGAQVISQPQPQYVYYQQPASPAPVPQVPETPAEE* # ORIGINAL: g5373.t1 original gene structure, not modified by PASA NODE_1173_length_13388_cov_40.6683 AUGUSTUS gene 1916 4891 . - . ID=g5373;Name=g5373.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS mRNA 1916 4891 . - . ID=g5373.t1;Parent=g5373;Name=g5373.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 3933 4891 . - . ID=g5373.t1.exon1;Parent=g5373.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 3933 4891 . - 0 ID=cds.g5373.t1;Parent=g5373.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 1916 3719 . - . ID=g5373.t1.exon2;Parent=g5373.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 1916 3719 . - 1 ID=cds.g5373.t1;Parent=g5373.t1 #PROT g5373.t1 g5373 MWSRSPSFVLSTLQGAAVDEPDRAPEDSKNDGRSVNGGQYSTDGTIRQRITSTGALRRAASDATASDDAFRGRSTADNTGGFQRESTGATLASRDVSIRLTDTYPPEATASFSMARDTHGESVGPFSDIEMTNGDNFIVDDAAETLGRTRITPPVAFSTLLFFRTAFIVLAFPFGLLYELFAVVRMRRCKDCRPLVLNASMNRTPRESRTSAGSLRGTPSTQTIANSAKRVADLCHSCLMRTGFRAYFEEWRLIAVYSVSVGSVVLYAMDQSHQFPRGRLMYVFSPLVFFFVMLVARCLTVAMRTDHKLHIEGARSARLRRRIAALSERFPWLKDVPLPCEPSVRDELGRISSLVQLLRTRKSSSAARPTRPVTPASQTAVDATDQVTESPPSLPPRDPQPQLDPSINGTLSGATPVTLASSALVTNDNGVLSTAPSVRQNTAQLAVGADDDPARMSSAARGSFHDRRSIAGLRHEEYVLSIEQIELTGADDLQPGFTTTESWVRQAQKSGGERRPAPMQTPLSNERAPIDKNAAAGRVAAVAADGGVALDADAAERAAAGGSSEDAPVVVGWDMACIALGIAWHCRMDPPEKGHPDFRLVSRVVTFLCGLLFAAAPVVYEASVGTGTGRAAINHASYTSVYIMTTFIVLAFYLVCEVGWSIDLAIRYFYQRNLQHHLLTSLAVRRGGISLLSTPTLEDRHPAPDYADARDMAPVMMFRMTDANDLFAWFRIRRVLLAWDMVENGHVADASFSLAFIAGTVLTAVGVYVITTLLFGIKSLSPGPTIPFMFVAFAIGTIGMSPIALMGAQTNRSQMLHTELLREVRVHLLWRRQLKKQRHGIAMEAEDDEESYADLRDGMSPRESEAEEEGEIETLLGELADFVSNEAQATRIMGIPITIEIASSIGGTLVAALAATGASF* # ORIGINAL: g5376.t1 original gene structure, not modified by PASA # ORIGINAL: g5376.t2 original gene structure, not modified by PASA NODE_1173_length_13388_cov_40.6683 AUGUSTUS gene 10471 12904 . + . ID=g5376;Name=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS mRNA 10471 12904 . + . ID=g5376.t1;Parent=g5376;Name=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10471 10485 . + . ID=g5376.t1.exon1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10471 10485 . + 0 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10627 10716 . + . ID=g5376.t1.exon2;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10627 10716 . + 0 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10864 11137 . + . ID=g5376.t1.exon3;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10864 11137 . + 0 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 11329 11443 . + . ID=g5376.t1.exon4;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 11329 11443 . + 2 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 11627 12593 . + . ID=g5376.t1.exon5;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 11627 12593 . + 1 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 12743 12904 . + . ID=g5376.t1.exon6;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 12743 12904 . + 0 ID=cds.g5376.t1;Parent=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS mRNA 10471 11190 . + . ID=g5376.t2;Parent=g5376;Name=g5376.t1 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10471 10485 . + . ID=g5376.t2.exon1;Parent=g5376.t2 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10471 10485 . + 0 ID=cds.g5376.t2;Parent=g5376.t2 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10627 10716 . + . ID=g5376.t2.exon2;Parent=g5376.t2 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10627 10716 . + 0 ID=cds.g5376.t2;Parent=g5376.t2 NODE_1173_length_13388_cov_40.6683 AUGUSTUS exon 10864 11190 . + . ID=g5376.t2.exon3;Parent=g5376.t2 NODE_1173_length_13388_cov_40.6683 AUGUSTUS CDS 10864 11190 . + 0 ID=cds.g5376.t2;Parent=g5376.t2 #PROT g5376.t1 g5376 MAGQEANGSFGYLLDGASQIPLWLTVKDDCLTLHKDVVVTDEGERHVRLHRSAGGFGFTVRGGLDCNGPVTVASITLPSTAQMLHVGDEIKSIGGQHVDGLVHAEVVATLREAEGDLQLRVVFDGAARIKYGTSPENGGVDLPVLYSFRLDGLVATSCRIPSEKQRTYHRAVRLLAPEHPGRMFFIKAPDDERTAQWLAELGASFAEGSEEDSFGIISPGSSADGGAPGAPSRDPLVPPWKLVKRDPAVSLPLTAANLQSQSQQQSASQAAVVASPPPPTQLQPAPPAHGTPTLMKSLSPFSRSPSQRRASVDVSTMMSSVSASVSPRSMRAAASALFSRPDLHPALMAMAPAPSTSDVGANALLSSPQRSPATHRASFDAAALMSSRTPTAASRSPIVSVFLPSPATPRESSQGPLSPTSPTRASPRGSFQAQVPLTSQSDPQVPRPVIRKPSLFEGADEMRVRLARMADAKRAKTACAVEDMRRRVASIEQARQKHVASNREHFSRKYSWRALKDESLRDLAEKLEFYRQSVIIMAGM* #PROT g5376.t2 g5376 MAGQEANGSFGYLLDGASQIPLWLTVKDDCLTLHKDVVVTDEGERHVRLHRSAGGFGFTVRGGLDCNGPVTVASITLPSTAQMLHVGDEIKSIGGQHVDGLVHAEVVATLREAEGDLQLRVVFDGAGWSPVVSFLSPGLGFQP* # PASA_UPDATE: g5375.t1, single gene model update, valid-1, status:[pasa:asmbl_648,status:3], valid-1 # PASA_UPDATE: g5375.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_647,status:3], valid-1 NODE_1173_length_13388_cov_40.6683 . gene 6145 9847 . - . ID=g5375;Name=g5375.t1 NODE_1173_length_13388_cov_40.6683 . mRNA 6145 9847 . - . ID=g5375.t1;Parent=g5375;Name=g5375.t1 NODE_1173_length_13388_cov_40.6683 . five_prime_UTR 9604 9847 . - . ID=g5375.t1.utr5p1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 9357 9847 . - . ID=g5375.t1.exon1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 9357 9603 . - 0 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 8977 9168 . - . ID=g5375.t1.exon2;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 8977 9168 . - 2 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 8316 8810 . - . ID=g5375.t1.exon3;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 8316 8810 . - 2 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 7965 8202 . - . ID=g5375.t1.exon4;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 7965 8202 . - 2 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 7598 7767 . - . ID=g5375.t1.exon5;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 7598 7767 . - 1 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 7187 7361 . - . ID=g5375.t1.exon6;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 7187 7361 . - 2 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 6795 6992 . - . ID=g5375.t1.exon7;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 6795 6992 . - 1 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 6532 6644 . - . ID=g5375.t1.exon8;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 6532 6644 . - 1 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . exon 6145 6389 . - . ID=g5375.t1.exon9;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . CDS 6193 6389 . - 2 ID=cds.g5375.t1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . three_prime_UTR 6145 6192 . - . ID=g5375.t1.utr3p1;Parent=g5375.t1 NODE_1173_length_13388_cov_40.6683 . mRNA 6145 9847 . - . ID=g5375.t1.1.5b6be70a;Parent=g5375;Name=g5375.t1 NODE_1173_length_13388_cov_40.6683 . five_prime_UTR 9604 9847 . - . ID=g5375.t1.1.5b6be70a.utr5p1;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 9357 9847 . - . ID=g5375.t1.1.5b6be70a.exon1;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 9357 9603 . - 0 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 8977 9168 . - . ID=g5375.t1.1.5b6be70a.exon2;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 8977 9168 . - 2 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 8316 8810 . - . ID=g5375.t1.1.5b6be70a.exon3;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 8316 8810 . - 2 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 7965 8202 . - . ID=g5375.t1.1.5b6be70a.exon4;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 7965 8202 . - 2 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 7598 7767 . - . ID=g5375.t1.1.5b6be70a.exon5;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 7598 7767 . - 1 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 7187 7361 . - . ID=g5375.t1.1.5b6be70a.exon6;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 7187 7361 . - 2 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 6746 6992 . - . ID=g5375.t1.1.5b6be70a.exon7;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . CDS 6755 6992 . - 1 ID=cds.g5375.t1.1.5b6be70a;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 6532 6644 . - . ID=g5375.t1.1.5b6be70a.exon8;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . exon 6145 6389 . - . ID=g5375.t1.1.5b6be70a.exon9;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . three_prime_UTR 6746 6754 . - . ID=g5375.t1.1.5b6be70a.utr3p1;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . three_prime_UTR 6532 6644 . - . ID=g5375.t1.1.5b6be70a.utr3p2;Parent=g5375.t1.1.5b6be70a NODE_1173_length_13388_cov_40.6683 . three_prime_UTR 6145 6389 . - . ID=g5375.t1.1.5b6be70a.utr3p3;Parent=g5375.t1.1.5b6be70a #PROT g5375.t1 g5375 MAVVMRPASYSPLSMNMRTLPLPPLMASTDRPRDLEGEAVCGGSMTLGEYQRRQLFVASLRGDVDTLKRLIRRGIPDLIHATDPAGESALHVSVRYNKEAFALALMECGADVNASDKNGGTPLMIAADYGHEECMLLLIKFKANVNARMLDGKTALFHCATQTRRHFIAMETLLRRDADVDAADSMGRTHLHFAAERGDTQICEFLLNHRASVNMEDVHGYTALHLAAGRGKVDCVSALLGHGASHFRTSTKATGCYGALHCAAAAGCIDAIELLIEAGDDVKRTADGDVTPLHIAAGRGFLECCKYLVKEGIPMTSVDAEGLTPADWARAYEKLDCAEYLMLGKRKKSATVKKRGGSRANSASSKKGRSKSASSRGRAGSAKATKEPEVRFHNWRQMDPGADHEEPIGEGGEFDKIVFSYRPNSVLQHRHPGHFLEDDTAWYERQPLHTLISMCDAAKHSDMISIDRAVMQGMRVNIRGDRGKTALMSACAHGNTEIVKYLLDKGARLDLADDFGWHALHFAAQHGHCDIALLLLDRGAAVNAKSANDGTALMRAAEQGHDKVVQVLVDRGADANMRNKRGTNALQLAEQWNRTEVIAILGPLIKKAVVTKKAPIRRARSAPPGATSKTGSSPASTAAGATSPAKLITDDTVVSESTTALFVRRKIPATPTPT* #PROT g5375.t1.1.5b6be70a g5375 MAVVMRPASYSPLSMNMRTLPLPPLMASTDRPRDLEGEAVCGGSMTLGEYQRRQLFVASLRGDVDTLKRLIRRGIPDLIHATDPAGESALHVSVRYNKEAFALALMECGADVNASDKNGGTPLMIAADYGHEECMLLLIKFKANVNARMLDGKTALFHCATQTRRHFIAMETLLRRDADVDAADSMGRTHLHFAAERGDTQICEFLLNHRASVNMEDVHGYTALHLAAGRGKVDCVSALLGHGASHFRTSTKATGCYGALHCAAAAGCIDAIELLIEAGDDVKRTADGDVTPLHIAAGRGFLECCKYLVKEGIPMTSVDAEGLTPADWARAYEKLDCAEYLMLGKRKKSATVKKRGGSRANSASSKKGRSKSASSRGRAGSAKATKEPEVRFHNWRQMDPGADHEEPIGEGGEFDKIVFSYRPNSVLQHRHPGHFLEDDTAWYERQPLHTLISMCDAAKHSDMISIDRAVMQGMRVNIRGDRGKTALMSACAHGNTEIVKYLLDKGARLDLADDFGWHALHFAAQHGHCDIALLLLDRGAAVNAKSANDGTALMRAAEQGHDKVVQVLVDRGWVHVHVQGGVAL* # PASA_UPDATE: g2229.t1, single gene model update, valid-1, status:[pasa:asmbl_7078,status:12], valid-1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . gene 365 2028 . + . ID=g2229;Name=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . mRNA 365 2028 . + . ID=g2229.t1;Parent=g2229;Name=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . five_prime_UTR 365 365 . + . ID=g2229.t1.utr5p1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . exon 365 419 . + . ID=g2229.t1.exon1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . CDS 366 419 . + 0 ID=cds.g2229.t1;Parent=g2229.t1;5_prime_partial=true NODE_4196_length_2038_cov_32.379_potentialcontaminant . exon 608 669 . + . ID=g2229.t1.exon2;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . CDS 608 669 . + 0 ID=cds.g2229.t1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . exon 859 1031 . + . ID=g2229.t1.exon3;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . CDS 859 1031 . + 1 ID=cds.g2229.t1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . exon 1302 1436 . + . ID=g2229.t1.exon4;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . CDS 1302 1436 . + 2 ID=cds.g2229.t1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . exon 1595 2028 . + . ID=g2229.t1.exon5;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . CDS 1595 1770 . + 2 ID=cds.g2229.t1;Parent=g2229.t1 NODE_4196_length_2038_cov_32.379_potentialcontaminant . three_prime_UTR 1771 2028 . + . ID=g2229.t1.utr3p1;Parent=g2229.t1 #PROT g2229.t1 g2229 VVGTELQPITGNKTYFPSIFQAIHDQSNGAFPQSVYSDWDGLFDLFPKTVVSDAVLLSDPDALVVTARIIDQVINKKAAKFVFLHFDDVDNAGHHFGWGSAEYYEAIMLVDACIGDLLLALERNGLRDKGLVVLTADHGGEDHSHGITDTLNIHTPLIISGPMVKQNNPLSCPLTVRNCTRAWLAIVPLFLVQTTLPVA* # ORIGINAL: g8456.t1 original gene structure, not modified by PASA NODE_1296_length_12337_cov_41.2769 AUGUSTUS gene 3250 4357 . - . ID=g8456;Name=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS mRNA 3250 4357 . - . ID=g8456.t1;Parent=g8456;Name=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 4202 4357 . - . ID=g8456.t1.exon1;Parent=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 4202 4357 . - 0 ID=cds.g8456.t1;Parent=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 3752 3953 . - . ID=g8456.t1.exon2;Parent=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 3752 3953 . - 0 ID=cds.g8456.t1;Parent=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 3250 3581 . - . ID=g8456.t1.exon3;Parent=g8456.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 3250 3581 . - 2 ID=cds.g8456.t1;Parent=g8456.t1 #PROT g8456.t1 g8456 MLRLCDEHIERLLNPRVVALATFFHDVVYDPERGDNEERSADLFWEFVAECKTIISLSDEDAQQIAEFILATKAHVTPAHRQEHSSGAVDGGISTDTPADEDLSYFLDFDMSVLSWASADYFGYAAAIRQEYMHVPRDLYLTGRASVLKSFIAQVDQPTASQPNSTTGNQGEQGSTLSTVAHITTPIRHIYATQIFRSACEKRAIKNIRAEIALLESGAIPGESTPLCN* # ORIGINAL: g8455.t1 original gene structure, not modified by PASA NODE_1296_length_12337_cov_41.2769 AUGUSTUS gene 489 3080 . + . ID=g8455;Name=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS mRNA 489 3080 . + . ID=g8455.t1;Parent=g8455;Name=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 489 863 . + . ID=g8455.t1.exon1;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 489 863 . + 2 ID=cds.g8455.t1;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 1145 1305 . + . ID=g8455.t1.exon2;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 1145 1305 . + 2 ID=cds.g8455.t1;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 1642 1759 . + . ID=g8455.t1.exon3;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 1642 1759 . + 0 ID=cds.g8455.t1;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 2070 2624 . + . ID=g8455.t1.exon4;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 2070 2624 . + 2 ID=cds.g8455.t1;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 2797 3080 . + . ID=g8455.t1.exon5;Parent=g8455.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 2797 3080 . + 2 ID=cds.g8455.t1;Parent=g8455.t1 #PROT g8455.t1 g8455 ENFACVKIASQSASAADAITTSISAQSLESVAAIDDIRDNVSVSAPCTISTTTKAVKGSGIVRVIAEASEIEPDALKQLEAVARLDGVRYAIGLPDVHPGKGYPVGSAVASHGTVYPMLIGDDIGCGMSLHVTSLPARRAHKAQKWADALVGLDEPYDASAVASVLRDAHVTPSEFDSSLGTIGAGNHFAELQSVERIVDRELFNEMGLVEDKLYLLVHSGSRGLGRSVLSWQQDTFGTEGLPVASTPPTALQDDNVHAQLASSSPNTSTCDNACSHSSSQQSGESSNAPDAPPITPFDAYMQRHDHAMQWARCNRQLIARRFLDALSASSERLVLDVFHNFLEEKTFCESSDLNSRPCSCKLWLHRKGAAPADRGPVVIPGSRGASSYLVMPADGCVTEYSGFSLAHGAGRRWTRSKALNVGRNRFPDSDSLKVTSLGSVVVCESKELLYEEAPDAYKGIDGIVADLVSAGLCRVVAVLNPVVTYKTRGSVHACN* # PASA_UPDATE: g8457.t1, single gene model update, valid-1, status:[pasa:asmbl_1121,status:3], valid-1 NODE_1296_length_12337_cov_41.2769 . gene 5081 8641 . + . ID=g8457;Name=g8457.t1 NODE_1296_length_12337_cov_41.2769 . mRNA 5081 8641 . + . ID=g8457.t1;Parent=g8457;Name=g8457.t1 NODE_1296_length_12337_cov_41.2769 . five_prime_UTR 5081 5204 . + . ID=g8457.t1.utr5p1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 5081 5334 . + . ID=g8457.t1.exon1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 5205 5334 . + 0 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 5563 5635 . + . ID=g8457.t1.exon2;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 5563 5635 . + 2 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 5750 5830 . + . ID=g8457.t1.exon3;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 5750 5830 . + 1 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 6104 6254 . + . ID=g8457.t1.exon4;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 6104 6254 . + 1 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 6871 7058 . + . ID=g8457.t1.exon5;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 6871 7058 . + 0 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 7246 7330 . + . ID=g8457.t1.exon6;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 7246 7330 . + 1 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 7799 7943 . + . ID=g8457.t1.exon7;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 7799 7943 . + 0 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . exon 8391 8641 . + . ID=g8457.t1.exon8;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . CDS 8391 8521 . + 2 ID=cds.g8457.t1;Parent=g8457.t1 NODE_1296_length_12337_cov_41.2769 . three_prime_UTR 8522 8641 . + . ID=g8457.t1.utr3p1;Parent=g8457.t1 #PROT g8457.t1 g8457 MALFTSGLLRLPPTVRLTQSVGALRAPFLRAFSAASSGQAIDFGTPSKEQVEKFNNEGFLEVPNVITTELCSAINARIDRCFKGNFDTGNYPDEWYWREEMSKPDVTRHGANFWKSDRLVASVVLSAGVSKFAAGLMSFSGTRIGNDSIWVKPPNSTATGVAFHRDTFYVPYKMITCWLTLTDVSEANGTLQYVPGSHKWREAKAIPRDAFHAPGTYLAAAFDAAAKAGVSKDDIKLHSVNLKAGSIVFHHGDMWHGSLANSTTDKFRRSLGIHLIPDDAKFGESDGYIYGRYKKHGSNEMDEAFFPITWRSDGYRSPFIRQHTAGV* # ORIGINAL: g8458.t1 original gene structure, not modified by PASA NODE_1296_length_12337_cov_41.2769 AUGUSTUS gene 9448 12109 . - . ID=g8458;Name=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS mRNA 9448 12109 . - . ID=g8458.t1;Parent=g8458;Name=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 12010 12109 . - . ID=g8458.t1.exon1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 12010 12109 . - 0 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 11798 11863 . - . ID=g8458.t1.exon2;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 11798 11863 . - 2 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 11561 11685 . - . ID=g8458.t1.exon3;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 11561 11685 . - 2 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 11195 11385 . - . ID=g8458.t1.exon4;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 11195 11385 . - 0 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 10819 10945 . - . ID=g8458.t1.exon5;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 10819 10945 . - 1 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 10353 10457 . - . ID=g8458.t1.exon6;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 10353 10457 . - 0 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 9917 10093 . - . ID=g8458.t1.exon7;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 9917 10093 . - 0 ID=cds.g8458.t1;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS exon 9448 9585 . - . ID=g8458.t1.exon8;Parent=g8458.t1 NODE_1296_length_12337_cov_41.2769 AUGUSTUS CDS 9448 9585 . - 0 ID=cds.g8458.t1;Parent=g8458.t1 #PROT g8458.t1 g8458 MDRVDRILFDPNFHKGDKTSASDGKQLLEKHLIVELELSADVNKALRDMEAYNIMSLPIYDGEKKEYVGLLSIYDIMVFAVFGFYKSHETFVTAHDLAERKARVSDLPVSVLIGTADYLKGGWWRQNGLCIYEPTMTVWDVLDTMGMGIERVLVRSRDTEGPTGLDDGETHEPVAIVHHMLSQMDVLRFLCQHHMHFPVFAKKIHELGLDNADGHSRVVIADETEQTLTVYRTMFEQQAVAVAIVDSKTGQLASTLSPSDLRGIRLNLLGNLLLSVKDFLEKSRFGESPSPVAVTTEATLLMVATMALVAKVHRVWVVDANGKPISMVRPTDIINAVRASLL* # PASA_UPDATE: g10324.t1, single gene model update, valid-1, status:[pasa:asmbl_5099,status:12], valid-1 NODE_283_length_28117_cov_43.9065 . gene 1337 8180 . + . ID=g10324;Name=g10324.t1 NODE_283_length_28117_cov_43.9065 . mRNA 1337 8180 . + . ID=g10324.t1;Parent=g10324;Name=g10324.t1 NODE_283_length_28117_cov_43.9065 . five_prime_UTR 1337 1369 . + . ID=g10324.t1.utr5p1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 1337 1642 . + . ID=g10324.t1.exon1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 1370 1642 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 1752 1934 . + . ID=g10324.t1.exon2;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 1752 1934 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 2074 2104 . + . ID=g10324.t1.exon3;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 2074 2104 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 2238 2276 . + . ID=g10324.t1.exon4;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 2238 2276 . + 2 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 2519 2651 . + . ID=g10324.t1.exon5;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 2519 2651 . + 2 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 2779 2823 . + . ID=g10324.t1.exon6;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 2779 2823 . + 1 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 2901 3117 . + . ID=g10324.t1.exon7;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 2901 3117 . + 1 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 3255 3463 . + . ID=g10324.t1.exon8;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 3255 3463 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 3612 3729 . + . ID=g10324.t1.exon9;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 3612 3729 . + 1 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 4078 4281 . + . ID=g10324.t1.exon10;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 4078 4281 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 4444 4598 . + . ID=g10324.t1.exon11;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 4444 4598 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 4739 4909 . + . ID=g10324.t1.exon12;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 4739 4909 . + 1 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 5023 5137 . + . ID=g10324.t1.exon13;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 5023 5137 . + 1 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 5242 5307 . + . ID=g10324.t1.exon14;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 5242 5307 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 5409 5483 . + . ID=g10324.t1.exon15;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 5409 5483 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 5643 5744 . + . ID=g10324.t1.exon16;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 5643 5744 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 5962 6165 . + . ID=g10324.t1.exon17;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 5962 6165 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 6301 6687 . + . ID=g10324.t1.exon18;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 6301 6687 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 6764 6925 . + . ID=g10324.t1.exon19;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 6764 6925 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 7071 7149 . + . ID=g10324.t1.exon20;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 7071 7149 . + 0 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 7262 7300 . + . ID=g10324.t1.exon21;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 7262 7300 . + 2 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . exon 7526 8180 . + . ID=g10324.t1.exon22;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . CDS 7526 7668 . + 2 ID=cds.g10324.t1;Parent=g10324.t1 NODE_283_length_28117_cov_43.9065 . three_prime_UTR 7669 8180 . + . ID=g10324.t1.utr3p1;Parent=g10324.t1 #PROT g10324.t1 g10324 MVHLSRRIRVQRNSSHGGTDAAESHQMSLADTFFKKFKNISADSAAPTEAAPPAAPADQSTAQGAVFGVSSSLNRISISTDINSGAKSHPKHAAIYRALLRSVIFRVGALPDAECSDERLYEYLRKTFDYSQEKHSAALAEEVRLLKANEGKEHFQRKLIIRVLAARNVAAKDDTGKSDPFCTLKMFDGDIQAAKQIAPFATTQTVKQNLNPVWNETFTIPIRDMHKEQLLLEMWDWDEKTSFGANLLTGKLAKIAGEKNDFLGRMVLPLAQIPTGGLEKWVPLEKRSNKSTVSGEIHVKIEFSAEGTMQGDASLAVDELTVLDVLEGAMCEEVLSSIALSAEAAAPWDGSANVRGRCLQSLFAALAGVPAIELETLRFRHMVRVHQMHGVELKVLSAAVNHIADGIAATKLRPNVQADLDSAVAKLVENLTDCVINHRDVFPAHYKDSSAALQQTIALLHQVHAAQHVSLNGDALRVLRERIEENLDKLYIRMDAMAEPGDVSASEDTVRLTRLTASISKELDDVVITYTRPLTELLGTNFGLVCTQHYCRPLGHAVMTHLEQLPEESTDTFVFELYFVVQKLVTRNAKWIGDLPISKFHEWFAPFVVQWMKMSAEKSTLWIMNAIKEDKVDAVESTLHSSSVVDVFCCFHQTLSFLTKLNWPDSATNSAFMTLLAKIICNGVALYGEKIREDLEKKGFYDDEGQFDVTSQLCYALNNVEQARQKLENLYELMGVHEIVTEHNRTTDDGTVAPIKSLFDDSYERLRDMLQFLLSIIADKMSPDIYGYLRNIATHRRESITIGGFFRKAFGGQPDAPPVSAADPSGQATEAEVSTLLDPLLKYLTSNLETLSVTMYQSVFQLILQEIWQRVVVNVLELVLPAETHLAKGAVPTISMTPKQMSIIEQALKILREFFHADGDGVKLSKLDTDEYKGLILLLERFRSPTADLAELFYAALAEQKDTSTAELGTVTLEVSFVPDGTGGTLVANVIECANLPAMDANGLSDPYVVLELRPPVEKVGQMRTKTVKETLSPVFNEEFKLWVRVGAV* # ORIGINAL: g10327.t1 original gene structure, not modified by PASA NODE_283_length_28117_cov_43.9065 AUGUSTUS gene 18131 21188 . - . ID=g10327;Name=g10327.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS mRNA 18131 21188 . - . ID=g10327.t1;Parent=g10327;Name=g10327.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 20985 21188 . - . ID=g10327.t1.exon1;Parent=g10327.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 20985 21188 . - 0 ID=cds.g10327.t1;Parent=g10327.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 18131 20881 . - . ID=g10327.t1.exon2;Parent=g10327.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 18131 20881 . - 0 ID=cds.g10327.t1;Parent=g10327.t1 #PROT g10327.t1 g10327 MGKKPAKNGAKGKAPADFTKVRTKVGKKKQLASNATDTTFKARVVHMPTQAVGHERTAETTDRGLSIKDLLSQSRHYSPTVRKDALQGMRDIFVRNPQSVTVHLAAVVERTVELVCDPEPSVRRGLLALLRTALSSLDERRVRPFFPLLIVHTASAMTHIRDDVRIDSLEFVDLWLERFPSLVAARSSQLLPNFIDLISGPSSGASRSLHTSVRGKMAGTAARESILRRMLVFLEALFAQSAPAESDLTWAPSPQTASASLSNIVPLTTTWGDARSSGWLFRGGASLGVDSHADTAHFGSSQPSASSGSGGGLLREGERFSPESLARSQPLSAFVRLLTPVLLECWVEAGPAEVPSGGGNVACLELVASVADLLWDRLECVLEAEAAEKGARSARGGSLSSAFPDHSKDFQRHLLAHFPMAASGGQQERARTIAATNAKVCAIMSRFALGSTGAWVPRVRDHLHALLQSVVDGRSGVTLVSSATLRCLLGAVDRLLAATDDPTAASAIWSTLVAVCDRSAPSSAARRALVHSLARQLLPAACPPPSGQHTHAVVDTDSPRGQFVALLPKMLWQLGSTCPDASHTVLGFLAQVFRAGSQSANGHAWAVLAEGVAPALAPIFAVVVAGRKGAPSQVHFGPFVSLQPRLQGLAADLLFYVNRIPEAVVKGVVRCLCSAAVGADVVAHVLCALQGRLRRLFAEGLLDAQDISMHLSILLSTAVGYSAEDIAAAAGHPDGGLVAGPAAQVALVDPPAVSAAPSPDAQCEVWRRRRSVVRIVADSLASFLHHFSDVLPSVHPAVDMLVARSNGVLPADAAIGLVRLLSVVAVSEICDEADSPDVDADADARLRGRLCVAVLHYCVRLRHLLGAVGFSAGASAAEATTVAIDAGIDACASLLERDDSATAQTLSGIRDACSSGDAAAGTAAAYVLWELVAYSGARGVHAALVRQRPEFALAVRCAVGMEGARDVAGRLRAEACLLIGDLAL* # ORIGINAL: g10323.t1 original gene structure, not modified by PASA NODE_283_length_28117_cov_43.9065 AUGUSTUS gene 37 962 . - . ID=g10323;Name=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS mRNA 37 962 . - . ID=g10323.t1;Parent=g10323;Name=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 864 962 . - . ID=g10323.t1.exon1;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 864 962 . - 0 ID=cds.g10323.t1;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 675 788 . - . ID=g10323.t1.exon2;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 675 788 . - 0 ID=cds.g10323.t1;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 253 382 . - . ID=g10323.t1.exon3;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 253 382 . - 0 ID=cds.g10323.t1;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 37 177 . - . ID=g10323.t1.exon4;Parent=g10323.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 37 177 . - 2 ID=cds.g10323.t1;Parent=g10323.t1 #PROT g10323.t1 g10323 MAQTMHVRYLGRVGYVQALAIQRAWAEAVHASSPDVLLLLEHPAVYTTGKHAEAGEGEELRLRALGAEYYKTGVRSYVASLENILIDTCRAFGIPATTTADTGVWVLGNKIAAIGVNVSRGITSHGFALNCCTDLQWFSNIVPCGLVGKGVTSLTKETRQQ # PASA_UPDATE: g10329.t1, single gene model update, valid-1, status:[pasa:asmbl_5104,status:12], valid-1 NODE_283_length_28117_cov_43.9065 . gene 25017 28059 . - . ID=g10329;Name=g10329.t1 NODE_283_length_28117_cov_43.9065 . mRNA 25017 28059 . - . ID=g10329.t1;Parent=g10329;Name=g10329.t1 NODE_283_length_28117_cov_43.9065 . five_prime_UTR 28037 28059 . - . ID=g10329.t1.utr5p1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 27875 28059 . - . ID=g10329.t1.exon1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 27875 28036 . - 0 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 27672 27762 . - . ID=g10329.t1.exon2;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 27672 27762 . - 0 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 27403 27554 . - . ID=g10329.t1.exon3;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 27403 27554 . - 2 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 26679 26922 . - . ID=g10329.t1.exon4;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 26679 26922 . - 0 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 26251 26395 . - . ID=g10329.t1.exon5;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 26251 26395 . - 2 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 25764 26112 . - . ID=g10329.t1.exon6;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 25764 26112 . - 1 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 25482 25573 . - . ID=g10329.t1.exon7;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 25482 25573 . - 0 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . exon 25017 25301 . - . ID=g10329.t1.exon8;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . CDS 25079 25301 . - 1 ID=cds.g10329.t1;Parent=g10329.t1 NODE_283_length_28117_cov_43.9065 . three_prime_UTR 25017 25078 . - . ID=g10329.t1.utr3p1;Parent=g10329.t1 #PROT g10329.t1 g10329 MRLHREEDLGFVLRGITRLIKSPLRHTYLPKSERRVLFHQEVLLLLWKMCEHNKAFLHFMLKTTDVLEVLVPILFFINDSRDDLARMGLVHIGIYLLLVLSGERNFGVRLNKSVVGRTPIDVSNFTGSHGDLLILVLHRLLTAPDGRFSPLTESLLTIIVNVSPYLKTVSMAACTKLIHLFEVKSNARAVLSGQSSPNFIFYLLETFNNIIQYQFDGNANLIYVMIRQRALFDQLVSFPTDAETIRRKSIAKRQRDASAGATEDVDGAQMALASTLPPQPLSHVRQPEDAESPPHGSDVAPPPARPGPLQRTVEEMAARSFRRVSVPQPQATPAPASGMVVVPGDGAPDAPWPHSTAGGLMPRAEDLASTGGALAAPTPEWVLSWKEKLPLETITRLLQVLVPQVEKICIDRGITDESEILRFLRNGTLVGLLPVPHRILIRRYESNAGTCLWFMTYMWGVIYLRTADPPLWHGTGVRLFQIKPS* # PASA_UPDATE: g10325.t1, single gene model update, valid-1, status:[pasa:asmbl_5102,status:12], valid-1 NODE_283_length_28117_cov_43.9065 . gene 8183 11674 . - . ID=g10325;Name=g10325.t1 NODE_283_length_28117_cov_43.9065 . mRNA 8183 11674 . - . ID=g10325.t1;Parent=g10325;Name=g10325.t1 NODE_283_length_28117_cov_43.9065 . five_prime_UTR 11621 11674 . - . ID=g10325.t1.utr5p1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 11590 11674 . - . ID=g10325.t1.exon1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 11590 11620 . - 0 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 11244 11390 . - . ID=g10325.t1.exon2;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 11244 11390 . - 2 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 10892 11071 . - . ID=g10325.t1.exon3;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 10892 11071 . - 2 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 10741 10778 . - . ID=g10325.t1.exon4;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 10741 10778 . - 2 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 10486 10576 . - . ID=g10325.t1.exon5;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 10486 10576 . - 0 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 10239 10320 . - . ID=g10325.t1.exon6;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 10239 10320 . - 2 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 9982 10119 . - . ID=g10325.t1.exon7;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 9982 10119 . - 1 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 9718 9835 . - . ID=g10325.t1.exon8;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 9718 9835 . - 1 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 9525 9620 . - . ID=g10325.t1.exon9;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 9525 9620 . - 0 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 9106 9202 . - . ID=g10325.t1.exon10;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 9106 9202 . - 0 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 8634 8685 . - . ID=g10325.t1.exon11;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 8634 8685 . - 2 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . exon 8183 8505 . - . ID=g10325.t1.exon12;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . CDS 8418 8505 . - 1 ID=cds.g10325.t1;Parent=g10325.t1 NODE_283_length_28117_cov_43.9065 . three_prime_UTR 8183 8417 . - . ID=g10325.t1.utr3p1;Parent=g10325.t1 #PROT g10325.t1 g10325 MPHLTEAQEDVILKAFDAIDADGNGSIDKVELENAVAEIIGHAPTDSEIREMMTKADTDGNGKITLAEFKKLMADHLSKTTNWGKLKTALSGYVGIDNVSEQLKKKSLKKGFEFNLMVVGESGLGKSTMVNTLFMSKISRASTIPESREQRPKTVEVHSVSHVIDEHGVRVRLTITDTPGFGDQINNDNCWQPILNHVNAQYEQYFSEERAVNRRRRIPDTRVHCCLYFIAPTGHSLKPIDVEFMKKLDKAVNIVPVIAKSDSLTEDERVEFKKRIKEDLEQHGIRLYPFDSDDDTEDDNAANEALRDAIPFAVVGSETGISVGGKTVLGRRTKWGLIEVENEKHSEFPVLRNMLIRTHLQDLVEQTDKIHYENFRKAKLAKSAH* # PASA_UPDATE: g10328.t1, single gene model update, valid-1, status:[pasa:asmbl_5100,status:3], valid-1 NODE_283_length_28117_cov_43.9065 . gene 22160 24979 . + . ID=g10328;Name=g10328.t1 NODE_283_length_28117_cov_43.9065 . mRNA 22160 24979 . + . ID=g10328.t1;Parent=g10328;Name=g10328.t1 NODE_283_length_28117_cov_43.9065 . five_prime_UTR 22160 22418 . + . ID=g10328.t1.utr5p1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 22160 22494 . + . ID=g10328.t1.exon1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 22419 22494 . + 0 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 22606 22680 . + . ID=g10328.t1.exon2;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 22606 22680 . + 2 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 22782 23096 . + . ID=g10328.t1.exon3;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 22782 23096 . + 2 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 23216 23277 . + . ID=g10328.t1.exon4;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 23216 23277 . + 2 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 23385 23521 . + . ID=g10328.t1.exon5;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 23385 23521 . + 0 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 23681 23885 . + . ID=g10328.t1.exon6;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 23681 23885 . + 1 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 24060 24218 . + . ID=g10328.t1.exon7;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 24060 24218 . + 0 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 24362 24481 . + . ID=g10328.t1.exon8;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 24362 24481 . + 0 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . exon 24636 24979 . + . ID=g10328.t1.exon9;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . CDS 24636 24755 . + 0 ID=cds.g10328.t1;Parent=g10328.t1 NODE_283_length_28117_cov_43.9065 . three_prime_UTR 24756 24979 . + . ID=g10328.t1.utr3p1;Parent=g10328.t1 #PROT g10328.t1 g10328 MSRSRAKQTTVKGRLQNAWNTFLVKIASTSVSLKSRSEALWLLGVCYRDGGDRGGSSSPVSSTSSSDVPRVGDDVSTRDSGVGGSLAGAPSPLSGSRVTHSSFRTDFCSRIWLSYRKNFSPISDSSLTTDCGWGCMIRAGQMLLAQCLSLSILGRDWRLTPGNTVATDASYQNYLQIVRWFNDEAGEGSPFSIHNVLETAVNVCGKKPGDWFGPCTVTGVLSRLLNDNAMRTPGLGQLRSFVALDHTIYRSSVREFCVDRLTSEWMPLVLFVPLRLGSHSFNKKYLPALKALLTIPQCAGLIGGCGSSGLYFLGFQGDALIYMDPHGCKAYAGEAADGNFNSKSFQARCPQKMRFCGLDPSMGSAFFCRDRESFDDLCDRLKEMTEVMERPILGVAEHAPDTSGCLDGSRTSICNGEDFVVL* # ORIGINAL: g10326.t1 original gene structure, not modified by PASA NODE_283_length_28117_cov_43.9065 AUGUSTUS gene 13247 17991 . + . ID=g10326;Name=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS mRNA 13247 17991 . + . ID=g10326.t1;Parent=g10326;Name=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 13247 13582 . + . ID=g10326.t1.exon1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 13247 13582 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 13675 14415 . + . ID=g10326.t1.exon2;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 13675 14415 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 14531 14860 . + . ID=g10326.t1.exon3;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 14531 14860 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 15013 15123 . + . ID=g10326.t1.exon4;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 15013 15123 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 15417 15536 . + . ID=g10326.t1.exon5;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 15417 15536 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 15657 15986 . + . ID=g10326.t1.exon6;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 15657 15986 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 16101 16288 . + . ID=g10326.t1.exon7;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 16101 16288 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 16541 16646 . + . ID=g10326.t1.exon8;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 16541 16646 . + 1 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 16748 17047 . + . ID=g10326.t1.exon9;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 16748 17047 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 17267 17356 . + . ID=g10326.t1.exon10;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 17267 17356 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS exon 17728 17991 . + . ID=g10326.t1.exon11;Parent=g10326.t1 NODE_283_length_28117_cov_43.9065 AUGUSTUS CDS 17728 17991 . + 0 ID=cds.g10326.t1;Parent=g10326.t1 #PROT g10326.t1 g10326 MTTRARPRDDDDASFALGQQNLALHYDAVFRQLAAEIMRATEACITDKAVRIRISAWMKKLGEPCPVASWKRNRNAHAKLLLEMVQSGHVGAPFDRRPEHGPLGNLPVFTAQNDSSSRSPPRNRRGVDGSPTRRTASQQQNDRRNRHGDGARSYDDGWDDDADYEGDAGGASAEWDGGAVLEGMGSSRPARAHHAPTVRAAEAVVGMARSVRNKSEGIADAGVSRHSHHPQSQSQSHRQRQQQNTEHSTMDFGDLAGGRPEDPSTGHPAADELTRLRDHVRVLELRLAQDHRSLREEYEAAVQRLLDRKEQEVSALRRAAETEAEERASAVARLEARIRELQEDVAVARRVAEQDTERKSAEIMADAEKARLELQRSHAREMEDMAAKTSQRVERAERRLQAQAAQAHERAVGAERALVRAEDEVRHLRDENGRLARDLRDVRESHAHAEQRAAESDALRKRMQEEHAEKLQEVLEMTSGSLNKVRGEYALNAGRAQERIDALEAETARLKGEIVDHVAARKVLAEDSQRQRDTAIRAIDQEWAGKLERLRSECDGEIALLQRRLREVSALADQRDAAAGHEEQRAEAAESALAAAQERSRVLQGHVQAAEETADALRREVAKWRQAAEADKAAVARVEDDARAARADDARMRERELARVRADADEAMEDLRGQCERRIGEQAAALRSHAARTEEEARARAARDQATIAGLTKEIETLREDLERADNLRRAETAGLERVQAQERKAERALFDSEVIKLRQQQEDALTALHQQHLRDVQRVQDRAAERVRLAEGDAASAMHKASEAVEERQRIIVALQAELSQTRAQRSREAEEWALRAAREQEGARRQFELTTKALERDLQQQTERADQLERMLRSAEADAFRKELEDTIVSLKAQIGALEERSAFLAQQQQQHAHTARAAAHARGFTPVPADASRQHEDASRLGRHHDAPRPHSDVEALYRRLAAKREVA* # ORIGINAL: g3079.t1 original gene structure, not modified by PASA NODE_4970_length_1108_cov_38.365_potentialcontaminant AUGUSTUS gene 63 372 . - . ID=g3079;Name=g3079.t1 NODE_4970_length_1108_cov_38.365_potentialcontaminant AUGUSTUS mRNA 63 372 . - . ID=g3079.t1;Parent=g3079;Name=g3079.t1 NODE_4970_length_1108_cov_38.365_potentialcontaminant AUGUSTUS exon 63 372 . - . ID=g3079.t1.exon1;Parent=g3079.t1 NODE_4970_length_1108_cov_38.365_potentialcontaminant AUGUSTUS CDS 63 372 . - 0 ID=cds.g3079.t1;Parent=g3079.t1 #PROT g3079.t1 g3079 MDVMSSPPQPSIGIFTALNRDVWTDARDELCKSSHNRESLAIVQTALFVAKMDDANPTTTDERMLEAMTGSTPGNRWSDAAMQVTVNKAGKLHANMEHSGVDG # ORIGINAL: g2886.t1 original gene structure, not modified by PASA NODE_5314_length_910_cov_39.092_potentialcontaminant AUGUSTUS gene 66 683 . - . ID=g2886;Name=g2886.t1 NODE_5314_length_910_cov_39.092_potentialcontaminant AUGUSTUS mRNA 66 683 . - . ID=g2886.t1;Parent=g2886;Name=g2886.t1 NODE_5314_length_910_cov_39.092_potentialcontaminant AUGUSTUS exon 66 683 . - . ID=g2886.t1.exon1;Parent=g2886.t1 NODE_5314_length_910_cov_39.092_potentialcontaminant AUGUSTUS CDS 66 683 . - 0 ID=cds.g2886.t1;Parent=g2886.t1 #PROT g2886.t1 g2886 MVGMGWWGGGGEDLTKWLVGDVERNFGASPSVEFSSLSVFAPPGRYVLTAVSASPFFYGAYDENTDNQLLPGTLAINVTVRSCDSNERLESNNVTRQYKCVANSAGGSSSGTLTVALSVSMASLALFGIVFALVRWQLAEIRQKQSAATHADFVQKHVLQHETLASFELSRDTIELLRRLARASLVSCARLVSFSFGRGCVRQRR* # ORIGINAL: g1783.t1 original gene structure, not modified by PASA NODE_3031_length_4487_cov_84.8932 AUGUSTUS gene 2839 4301 . + . ID=g1783;Name=g1783.t1 NODE_3031_length_4487_cov_84.8932 AUGUSTUS mRNA 2839 4301 . + . ID=g1783.t1;Parent=g1783;Name=g1783.t1 NODE_3031_length_4487_cov_84.8932 AUGUSTUS exon 2839 2860 . + . ID=g1783.t1.exon1;Parent=g1783.t1 NODE_3031_length_4487_cov_84.8932 AUGUSTUS CDS 2839 2860 . + 0 ID=cds.g1783.t1;Parent=g1783.t1 NODE_3031_length_4487_cov_84.8932 AUGUSTUS exon 3520 4301 . + . ID=g1783.t1.exon2;Parent=g1783.t1 NODE_3031_length_4487_cov_84.8932 AUGUSTUS CDS 3520 4301 . + 2 ID=cds.g1783.t1;Parent=g1783.t1 #PROT g1783.t1 g1783 MEAKKVIHCGVRLQKQYWWSAAFRNAVWADIPRERLELKLNGVHSVHGDLSVLGGGRSLSLSQCYEVTNVSALGGVHSLNLSYCIELKDISALGGVHSLDLSYCEGVTDVSALGGVHSVNLSNCRGVTDVSVLGGVHSLNLACTGVKDVSALGGVHSLNLSNCKGVTDVSALGGVHSLTLSSCGGVTDVSALGGIHSLNLAHCKGVTDVSTLGGVHSLDLSYCEGVTDVSALGGVHSLDLSKCKRVMDVSALGGVDSFQLPNGEWRL* # PASA_UPDATE: g1782.t1, single gene model update, valid-1, status:[pasa:asmbl_5453,status:12], valid-1 NODE_3031_length_4487_cov_84.8932 . gene 1276 2928 . - . ID=g1782;Name=g1782.t1 NODE_3031_length_4487_cov_84.8932 . mRNA 1276 2928 . - . ID=g1782.t1;Parent=g1782;Name=g1782.t1 NODE_3031_length_4487_cov_84.8932 . five_prime_UTR 2736 2928 . - . ID=g1782.t1.utr5p1;Parent=g1782.t1 NODE_3031_length_4487_cov_84.8932 . five_prime_UTR 2497 2572 . - . ID=g1782.t1.utr5p2;Parent=g1782.t1 NODE_3031_length_4487_cov_84.8932 . exon 2736 2928 . - . ID=g1782.t1.exon1;Parent=g1782.t1 NODE_3031_length_4487_cov_84.8932 . exon 1276 2572 . - . ID=g1782.t1.exon2;Parent=g1782.t1 NODE_3031_length_4487_cov_84.8932 . CDS 1276 2496 . - 0 ID=cds.g1782.t1;Parent=g1782.t1 #PROT g1782.t1 g1782 MASRPTATFSSLPIEVILCHVVPFLSNKDLASFAGVNSRLRWVLKQVHVYSLNHESSAQYWWSAAFRNAVWADIPRERLKLDLFRVQIVDGDLSVLGGVHSLDLSNCCVTGDVSTLGGVHSLTLSGCNRVTDVSALGGVHSLVLSDCEGVTDVSALGGVHSLTISHCEGVTDVSALGGVRSLDLSYCEGVTDVSALGGVHSLTISHCYGVRDVSALGDVHSLKLSKCKGVTDVSPLGGVYSLNMFKCNGVADVSALGGVHSLIISKCERVMDVSALCGVHSLTLFDCFGVTDVSDLGGVHSLRLQFCHGVKDVSALGGVHSLILSDCRTVTNVSALGSVHSLKLQFCDGVTDVSALGGVHSLTLFGCEGVTDVSALGSVHSLTLVNCKGVTDVSALGSVHALTLFE* # ORIGINAL: g8461.t1 original gene structure, not modified by PASA NODE_3266_length_3877_cov_37.3698 AUGUSTUS gene 605 3128 . + . ID=g8461;Name=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS mRNA 605 3128 . + . ID=g8461.t1;Parent=g8461;Name=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 605 964 . + . ID=g8461.t1.exon1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 605 964 . + 0 ID=cds.g8461.t1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 1268 1357 . + . ID=g8461.t1.exon2;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 1268 1357 . + 0 ID=cds.g8461.t1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 1742 1815 . + . ID=g8461.t1.exon3;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 1742 1815 . + 0 ID=cds.g8461.t1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 2169 2325 . + . ID=g8461.t1.exon4;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 2169 2325 . + 1 ID=cds.g8461.t1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 2595 2716 . + . ID=g8461.t1.exon5;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 2595 2716 . + 0 ID=cds.g8461.t1;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS exon 2987 3128 . + . ID=g8461.t1.exon6;Parent=g8461.t1 NODE_3266_length_3877_cov_37.3698 AUGUSTUS CDS 2987 3128 . + 1 ID=cds.g8461.t1;Parent=g8461.t1 #PROT g8461.t1 g8461 MDVIAAKLERFSAFLKEQQQKDGRESASEIDAKTTERVGKLVQSVFKAIKSKGLQLRNSPPFLQEILSGIYQHVQLLTASTPVDALKACVPFRVFLVGFVAKAELVLKLIKTSGDAIHSPDSQPRKALTRVTLTLSHVLADFKAMFPNGKIVNSTYIKFAKREAGEFWFSSFGDKMIVTWEEFIHAFNNVHHVRTPEEKMAIKASINLTENDNVTWFEFDVFTRLFQPWKQILNNWNVIVVAHPGYQAFMTYDEVSALLNQFIDKPGSYVFRLSCTRLGQWAIGYVTSDRKIVQTIPQSKSLYQALIDGAADGT* # ORIGINAL: g9707.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 54764 55615 . - . ID=g9707;Name=g9707.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 54764 55615 . - . ID=g9707.t1;Parent=g9707;Name=g9707.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 54764 55615 . - . ID=g9707.t1.exon1;Parent=g9707.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 54764 55615 . - 0 ID=cds.g9707.t1;Parent=g9707.t1 #PROT g9707.t1 g9707 MRGEVRGAGELTVTVTEADTPLESTPPAPLSSIDGDIDGDIDAVDAPVPLVPIASSDSVVPADDEPTADDVTADPDVAITVTVDSAVGTDVDASDTTSEALDTVAAVAAIEANDVSPPEVVIPADVDTLIDATAGSEAGIEIVVDDDTATVVTRASDVGAVAVVAGTDSGVGVGCMDDTEERVMDPAIKSAVDAGEADCDGAAMDVDVDCVTLSDTAAGVDDDVSGDVRDAPGVLAEPEDKSPVDTICVDTDVASGAAVCATVDDDESVDDEIEAITREVTVT* # ORIGINAL: g9695.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 4531 7624 . + . ID=g9695;Name=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 4531 7624 . + . ID=g9695.t1;Parent=g9695;Name=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 4531 4788 . + . ID=g9695.t1.exon1;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 4531 4788 . + 0 ID=cds.g9695.t1;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 4913 5192 . + . ID=g9695.t1.exon2;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 4913 5192 . + 0 ID=cds.g9695.t1;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 5364 5692 . + . ID=g9695.t1.exon3;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 5364 5692 . + 2 ID=cds.g9695.t1;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 5822 6328 . + . ID=g9695.t1.exon4;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 5822 6328 . + 0 ID=cds.g9695.t1;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 6518 7624 . + . ID=g9695.t1.exon5;Parent=g9695.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 6518 7624 . + 0 ID=cds.g9695.t1;Parent=g9695.t1 #PROT g9695.t1 g9695 MESATVSRKERRLLKKASGDAAIGGASPTAVTLHPSSKSIGVGAGGTALAGGVAITTNAVNANWGVEAKAQVSRFHTETLETTSRELFLRNICIACGGVDLLVDSTLHVFPGHRYGLLGRNGVGKSTLLRSVASGKLPGFPANMRALYVQQEVDGDDRSSLDWVFAVDTERTALLEEEKVLREAVSSGPAAARVAAKRVLANRALAAAEDARVVADKRSRQRGKAARVVALAAEAAAAEAVGRASSAEDALCDDATGGDGDSANSGDSGSDDDAVAEVMLAEIYDKLEEMDADSAKSRATTILRGLGFDDVLIELPTRKLSGGWRMRVSLARALFRTPDVLMLDEPTNHLDLDATIWLEGQLRAMEETAVIVVSHDARFLNAVTTDTLVLRNKKLATFPGNYDAYTEATAEMLLRKQRLYDVIEKRRAHILDSIEKAVKTARASGDDKRLGMVASRKKKLERLGQERHDDGRRWRESYDGFRKEVTLDTPDPPVTLKIPEADTVTYQGSLLRLASVGFSYVPDVHSYPSPQSAVSAQQAAPASVSKAPAASVSAPVRTKLFSAVDMDVFADSRIGLVGSNGSGKSSLLRVIAGLCEPTEGAVQRHPSLRVGLFAQHAIDDLTPQLNSVEHMMRLTPGLKELEYRQFLGGFGISGKTALVPAGALSGGQKARLALALCLAKSPHVLLLDEPTNHLDLDTIEALAFAANEYGGGVIVASHDGRLLDAMDCDIFLVEGGKVGGPLANGFEEYASMVKARVAARNKRLAPRKPVIKKPAVDGKKAPVKGKTASSTSKNGKGTSGSKRTDAKKGAKTGTGSTGGTAKGTHK* # ORIGINAL: g9705.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 45847 53035 . + . ID=g9705;Name=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 45847 53035 . + . ID=g9705.t1;Parent=g9705;Name=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 45847 46003 . + . ID=g9705.t1.exon1;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 45847 46003 . + 0 ID=cds.g9705.t1;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 46151 47251 . + . ID=g9705.t1.exon2;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 46151 47251 . + 2 ID=cds.g9705.t1;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 47622 47765 . + . ID=g9705.t1.exon3;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 47622 47765 . + 2 ID=cds.g9705.t1;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 47958 53035 . + . ID=g9705.t1.exon4;Parent=g9705.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 47958 53035 . + 2 ID=cds.g9705.t1;Parent=g9705.t1 #PROT g9705.t1 g9705 MDRRLGREGTSPSTMAPKRQLLLHFVAFVVFIAVCVQAQSGMTDPGFCHFRTVVLPDECTHVRIATYVASHGYIVYVAGDAANLLVRMNSSSGDLIDVFRDLASQKASVSNIRCGAVDATGDSIYYGTKDGVIARVILTPASFPLVYAGKTTSAARFLGFTPHFSACIADPNRPRVYFAVYNGDGAAVALDVDAFAIAATPVRFAGLSQQNTAATGAFLLINTAYFTTFGGAIIGVNVTEWTLASVWMPPASAPDAQGLSVGRSGVLFFMPSVSMGVSANEDDGAMSAFVSTFVPYDPRISAADYGSTVDEWAFPQLLRFTQSVGDAAVLNASASFVVRAGRVTAGVFSSGAVYNAVFGRPDTARLSKITWAGQSPSQGWQLWDTITVDKGVELLSVASAGRLLFAGSRENRVYVIDTAGPRCAALKTCSECSNDAVCGWCSTTQQCMEGSAEEAYGQACVAWHYGECDECNVELCEACTDIPVCGWCAGSSRCMALDTTQISNKSALASSNGVSGSNGQPVACESDWRSVSCSVSVVSTSVSVIVSSSVTVADVTAESSTSAEVAETSDTAVPDATSSAVYTSDTSSALASLTLTTVIGGSLSTTMAPQSAAEPLTTDAKSSSASTLSALSSSPLSAGGSNTASVTFVSTSAAAMSSTFALEGTPTPTHPQFTTSDAVVTSTSTPVDVGLQDTSSQSTPSTQSLSAAVTSSLFSIPVVVDTSIPISVESSSEAVESASSVTENSADTSVESQVPGSSSLFPPTETLSATASVVVATGETVVPPSSSTLVPNSSDIPHPSLMNGSSTSAVDALLPTVTPAESTASHLVSAESVSTLLMPVASPSESTVTETATADHVLSLSSAGSALPSGVSSALEALSTTEGGSNESALSPQPEPSEFITTSADSLSSVDTPHTTAASMSSTSDTPAAHASSSASNAESAVSTQSYSSLLPPPVSVESTFESATQLSTQHETTTGTPMASVSSASSSFEQVSSIAASVSLSSADTETAETASVASIELPLATTSIVGSVSTPLSSQQASSLSHIPTPTMSSGVMESASEGVPSTVAVESAFAMSSSAASDATSAVIETDTAAAPPLSLEGLSSTSSNAQSMSATTPTVASPSTLSPSGVDSMSSVSPSLASSSSSLSAEGATPLESASGDILLSPTGSTVEATSDIQSQSQSQPSYQRTSTTEMSVSSGASTLSSVAGSPAMSASSPFSSSYAGSTSESVTETGSSSQYSSAETVGSSSLATNTPIPSSSSSWSMDASSAAESTISTDENMPLSNPTVSESVSADADETLAPPTIESVSTTWVSDSTTAVTSSLSGLSSSLGSVTAASVSQSVDITSSLDSSVIPLSSASDTLGTMESTTVSSYAATSFVTASEFVPAGTTVAPPWSSGPSSSSPDSVTPTEVSSATHYQSSSVAVEVTSPTAVTSETPPTVTQSDVTPATGVASPTSVSFESLSTTQSDVTPASGGISPSAVTSETFSTGTQSEVTPASDEATSTSETPSTVTQSKVTPGTGGASPTSVTSETPSTGAQSDVTSASGGISPTSVTSETPSTVTQSEVTLASDGASPTSRTLPTFETPSTVTQSDAAPATGGASSTSPTSVTSETPSTVTQSDATPATGAASPTPPTSVTSETPSTVTQSDATPTTGAASPTSPTAVTSETPSIDTQSDVTPVSGGASPTSLRSETPSTITQSDVTPVSGGASPTAMTISMESSSTEKEVQSESTSVSVASSTSEAVSLSTPAVTSASASASPTVLFESSVQGLSSSAVEPSIVSSTWVSDSSLVLSTAMSASTSSPTSVAESTSFATVSGHEDQVTSDNPAASALTLQSTTLDTTTTGPSPLPSGEGAQSTTWVSDSSVAATSSVLSESPMMSASSTVVVTSSSAGAFVSASAASVSPSPTISIAESPSPAEVTSSQVTTVVASIPGALASDSTRATETTSLVGSFGSPSSSIDATMTSIAGSTSSESVTETGSSSQYSSAETVGSSSLATNTPIPSSSSSWSMDASSAAESTISTDENMPLSNPTVSESVSADADETLAPPTIESVSTTWVSDSTTAVTSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSANNRECVDNMGVGFHHGCYVVGGGDVVSQISIRNDAICVDAIDRFELI* # PASA_UPDATE: g9698.t1, single gene model update, valid-1, status:[pasa:asmbl_760,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 11756 17578 . - . ID=g9698;Name=g9698.t1 NODE_11_length_71441_cov_43.4299 . mRNA 11756 17578 . - . ID=g9698.t1;Parent=g9698;Name=g9698.t1 NODE_11_length_71441_cov_43.4299 . exon 17492 17578 . - . ID=g9698.t1.exon1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . CDS 17492 17578 . - 0 ID=cds.g9698.t1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . exon 17117 17365 . - . ID=g9698.t1.exon2;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . CDS 17117 17365 . - 0 ID=cds.g9698.t1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . exon 16917 17019 . - . ID=g9698.t1.exon3;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . CDS 16917 17019 . - 0 ID=cds.g9698.t1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . exon 12487 16715 . - . ID=g9698.t1.exon4;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . CDS 12487 16715 . - 2 ID=cds.g9698.t1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . exon 11756 12274 . - . ID=g9698.t1.exon5;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . CDS 11942 12274 . - 0 ID=cds.g9698.t1;Parent=g9698.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 11756 11941 . - . ID=g9698.t1.utr3p1;Parent=g9698.t1 #PROT g9698.t1 g9698 MIRFTTINAADTVGAGQLVTEARQTTYAEESRLMSEYKEALSLLSAGALSAAGDKLEAILSSRLLQSNEPTKADQRLHDDARLWLKYGALKNIALTRERQGRSEDALSHLIEAVQVDSSDVVVWHRLGKIALGTRDFVLARHAFECGLKLSSNNWPCIDKLAQLHFVTGDLASCATYALRLLCNNPHHKPALSYLAHIAASDPWLAERLNISGQVEAGALRNATVLSPPVPPATGTATQLPSESITLMADVTWASLARALVRFLKANASNPSLAMRLQRVVILDGQPPDATEYPKRRRPRDEGKAMAAALSAAQKRKRKNGLAALQEGFSLGERGEHYPAYLRGGQQSQVSEGFASTQADSVGDSHNDAHAPPPHIDTLDCTADEFLKRMTGDGQCRASPVELSWSLLAHLALHADANWGDNSVASAFLELADLIRPFIPLRASGSEALNIMRVHLCAAEIAWAHRRSSSSAAMADVDQPQRPGGARRRPGAAVASNPTSAVSTCTSKPDATAQTNLHLGVVSAVAAARGFEDADIGLCVRWQWLRGIVLQSTEETPSAATPLLRACGDLVGRIPNHPQAVVVANADTACKPWRIDAAAVEKALEHLDRRLMLDNIDKLEAARDHAAIVNALRPLIFRGEQESEWVVATGEERFRLLRVLGAALLECRDRVGALRCEIRLIVACLADLSAVTEDSTAAAVASAATDVPALAATAPGTGVSEGAKPGDILQESLVTCTRLMADDPRMLRGVATDELVSLWTACDVIVHRFSAVRLAGGAVPPEAVRPYADDVLALSLVVAYHIARHGEELASEEARDHDRSLGLLKDAYDFADAFSCLRSSNFIFLRTCYDAYAEALDDTEKRDEFIGICGELFISEEGKIPLDRETIFTLFNGGILPNGLPRGELQKYARAAYGVFPGPDDCLFGDTDGHKIRSEVLSKAADDASAEASHDGPPRSFAAAFDGLTRFLRTGEDAWLQNVVRFSYEIAAADSPDGSENVARVRTWLYECLSQLYDKPAQRWDAAQHGRDAARQRLLMYDICVNPTRVDSWKALGLSFARMRDDFLNAWPECRWTPLTLWDYHRMAALCFHQCQALGDHSPDILEAWARLLYVARARRSRVFSLRGDDAALCKVLSVERGGHDREGDSEGVRLVAYAMSLLEACVDGASAKYRVLSLLGKTKEKLGEPPSVWMPLYMASVRACDAEEYGKIDVYYRVLSSAAKYLDRGGGDIGPVESVLRELFPQRVTEVLGMDDRGLLLATDKSGDDADGAAANGEDSHSMTLSSAQLRAVIVRTLREPGAPGIVKRFYAAWFKSAYRLSKIAESAGDLDVATEESRRLLDAKKSSPSMMVWMLSFADMRKSSWYRPGSYHEYVLRHIDVYVRIRAKTDDLSSLVPLLQRAPKMCDRLDESEIDGLSCRLVSTISALIASEIMALFGTDVAAALSRGLTAPCPGHVWTPTHADAADGASGGHGTGDGDLEGAWADRVQEIAFGIVGLPDCPVRQCPTGGAALIEGAVVLLYRARSGKWEATSDADNGDLTAGDISTAQLFWKERAASMAPSRKSLRRRPAALKEAEKGTVDDQAIAENGLQQPGLTDNTVMAPLPSADDDQAAGHTERPVDGAMTVTDAPMADAAAMECDEGNGGEEAMSDDSMAEPWFVARDPFTF* # ORIGINAL: g9702.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 34035 35569 . - . ID=g9702;Name=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 34035 35569 . - . ID=g9702.t1;Parent=g9702;Name=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 35351 35569 . - . ID=g9702.t1.exon1;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 35351 35569 . - 0 ID=cds.g9702.t1;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 35031 35152 . - . ID=g9702.t1.exon2;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 35031 35152 . - 0 ID=cds.g9702.t1;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 34507 34917 . - . ID=g9702.t1.exon3;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 34507 34917 . - 1 ID=cds.g9702.t1;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 34035 34290 . - . ID=g9702.t1.exon4;Parent=g9702.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 34035 34290 . - 1 ID=cds.g9702.t1;Parent=g9702.t1 #PROT g9702.t1 g9702 MLGLRHNADLRTLLFAAIYYTLVVVQWRNDFSPIATGILFYATFMFAFFGAVSVHNAIHCPLFHSRWLNSVFQVVLSLWFGHAAAAYVPGHNLSHHKYLQTPKDIMRTSKMRFRWHLLNGLLFMPMTLSATTRNDAAYFEAQRVNGRPIYRQLRVEMGLYVCVQVALAVTDPLRWLRVFFLPQVIGKYMIISLNMLQHDGCDPLSRYNHSRNFTGSILNFLCFNNGYHTIHHLFPGRHWSLLPAEHALKVRPHIHPNLDQPSILEYLWKTFVYPGIRLNYDGTPYTLPPDVPDEPWFYAQRETYSDLSVDSGVKVTAEEDAAERIPSRAPAKSAE* # ORIGINAL: g9711.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 67946 70952 . + . ID=g9711;Name=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 67946 70952 . + . ID=g9711.t1;Parent=g9711;Name=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 67946 67993 . + . ID=g9711.t1.exon1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 67946 67993 . + 0 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 68107 68215 . + . ID=g9711.t1.exon2;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 68107 68215 . + 0 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 68363 68952 . + . ID=g9711.t1.exon3;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 68363 68952 . + 2 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 69149 69230 . + . ID=g9711.t1.exon4;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 69149 69230 . + 0 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 69353 69482 . + . ID=g9711.t1.exon5;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 69353 69482 . + 2 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 69683 69770 . + . ID=g9711.t1.exon6;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 69683 69770 . + 1 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 69973 70036 . + . ID=g9711.t1.exon7;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 69973 70036 . + 0 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 70248 70401 . + . ID=g9711.t1.exon8;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 70248 70401 . + 2 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 70622 70700 . + . ID=g9711.t1.exon9;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 70622 70700 . + 1 ID=cds.g9711.t1;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 70860 70952 . + . ID=g9711.t1.exon10;Parent=g9711.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 70860 70952 . + 0 ID=cds.g9711.t1;Parent=g9711.t1 #PROT g9711.t1 g9711 MSRRAQDRRAVLPSQQRRLRHLRAIVARSLTWKVADGLPNVYYSLHDDPGSTAFYVSETVSATVNPAWRPFDLSLVSSAHTRALSQFVVRVFAEPSPPNEKSASCHPAHRLLVEWNVDLYGLEYYGQDISDLGDVTGASTPSPTPASSSSAPATPGGVGGFPPNTLLFELMDGLYGPPQSSVEFAVTSIEQEIKASMIKVERIRVKRMYGLDMVERIIDRERRLHSCSENMAAARRRIHESLRSPEKLEAPVLEEANLRLKYLRDEIVEQTALKEKDVSQRDSLATNIVERRHALDALSLNLAEAARALGVWHHDLAMKRDVLRKTHTLLMLRRSQLISQLNAMYPIDMANKQSNVYMICNLRLPNSDYSGHDEELIATALGHVCHLVFLIAKFIELPLRFPLVPMSSRSFVSDPISLPPSVFPLYSKGADRMRFDNGVFLLNKNIEQLLNFCGLHVTDLRLTLPNLKMLLHSDTKPS* # PASA_UPDATE: g9703.t1, single gene model update, valid-1, status:[pasa:asmbl_765,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 36146 38774 . + . ID=g9703;Name=g9703.t1 NODE_11_length_71441_cov_43.4299 . mRNA 36146 38774 . + . ID=g9703.t1;Parent=g9703;Name=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 36146 36255 . + . ID=g9703.t1.exon1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 36146 36255 . + 0 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 36566 36599 . + . ID=g9703.t1.exon2;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 36566 36599 . + 1 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 36861 37197 . + . ID=g9703.t1.exon3;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 36861 37197 . + 0 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 37511 37582 . + . ID=g9703.t1.exon4;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 37511 37582 . + 2 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 37831 38097 . + . ID=g9703.t1.exon5;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 37831 38097 . + 2 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 38292 38374 . + . ID=g9703.t1.exon6;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 38292 38374 . + 2 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . exon 38577 38774 . + . ID=g9703.t1.exon7;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . CDS 38577 38681 . + 0 ID=cds.g9703.t1;Parent=g9703.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 38682 38774 . + . ID=g9703.t1.utr3p1;Parent=g9703.t1 #PROT g9703.t1 g9703 MHLSDHISIVHPSCIACRRTPKMASTFMIVRSMASSRFAVSLASAATKGTHARSVVTTRALSSFPRMAFTASAPSHAKCSLSMRPISSTLLSASRACRGHTAHPSGAAATVAGRRWASSSSSSPVTPNASSASTDPVSENGRGFGEILQSLTRRTIMYGGVLLGVYVVGKMIYFTYATMADLTLRDLGEIGFFAGGIVSTLACLGLYRLARRYAAVNPEDLYRVVLRRMREDVVIQHKLGGDLRTGQFKAYSFQGGFRLGTGVDGWLPIAYKKRSVQLVFQLNGNTNTAMVSVHAAKKSGEYEYRSLALDVDNGERIIIEGEPDDVVYKGIIQLR* # PASA_UPDATE: g9704.t1, single gene model update, valid-1, status:[pasa:asmbl_761,status:3], valid-1 NODE_11_length_71441_cov_43.4299 . gene 38847 44905 . - . ID=g9704;Name=g9704.t1 NODE_11_length_71441_cov_43.4299 . mRNA 38847 44905 . - . ID=g9704.t1;Parent=g9704;Name=g9704.t1 NODE_11_length_71441_cov_43.4299 . five_prime_UTR 44781 44905 . - . ID=g9704.t1.utr5p1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . exon 40952 44905 . - . ID=g9704.t1.exon1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . CDS 40952 44780 . - 0 ID=cds.g9704.t1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . exon 40726 40824 . - . ID=g9704.t1.exon2;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . CDS 40726 40824 . - 2 ID=cds.g9704.t1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . exon 40489 40608 . - . ID=g9704.t1.exon3;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . CDS 40489 40608 . - 2 ID=cds.g9704.t1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . exon 38847 40376 . - . ID=g9704.t1.exon4;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . CDS 39274 40376 . - 2 ID=cds.g9704.t1;Parent=g9704.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 38847 39273 . - . ID=g9704.t1.utr3p1;Parent=g9704.t1 #PROT g9704.t1 g9704 MTPARMAPALGCRPWRRHVHAWLLSLAVLSAWVLCVHTEQIRWTRTSGIHSWHVASNWHPPVVPTSEDTVVVDADGSYTVVVSQPAQAATLFLGSQHTGVQTLLSASNMTFEGPVIVGPRGRMVVGVGADATNGSLSQCREEPVFSTRLRSLSGRDVLSDGEILLGSCRLESSVRSRGRIAVDVLSSSCPVRVVVDAASLVVTNGALDWNAGNLTLSNASSLRIFAQATFNLRTNGTLESIGVPSAVDLFGSTFVTLGSSSSTLRLSSRIVLSGLLNVTRGSLAVSGNFTALRESTAVGVNAISFSGGASAVEGRFSFGGVRVDGGASVSLSAVDHPLSIQSLSVLDGSAVDIASAGFALAFGALEALGLASVSIRASVVSLDTIVVADSARGLIAATALSAGRVRLIDAGTLFNVSASTATFAFLEVIGATLLLATDLDVTTYGLFESGSIESSGSAQLRLLRAFNMTTDGQRRVSGVRVALLPGCVALVTGGAVHLVSGGTIDVAAGASLRVGVVGVPSAPVFASDGAMSSMQIAGTLWFDGSVTTMNTSVSSSGRVIFGNNTRTTFMQPTSLSGDYYAADTAVVIVQGTSFGLRADDASVALGLPRSAGTLLVRGASLASSGPLLFATITLFSESSAILNAGSVVANGTRMGLVGTATAQVAAASASFAAVSLSDTSSIQFSSALLRACDLFLSGSAVALVQSANASFDNVRLVGTSVALLRGGVATVCVALVAEDSTFELSGRSTVGYLAISGRAQTQVKAAVTVDTLALSNGALRGSFDNLTVANGNWSGGEISGIGSVIFLGTFELLDVANAQKKIARTTIFSVNGDLIIRETELTLSDASSVSVASNGRVRLIGDAAILGGSGQRGNVTVSRGGQVQAEVVPTSGASVRRRLIVIPSTGTQIYDARVGVLLVSNGTVRAAGGVSLTADALALAGGALIVDGLVNATTSMVWSAGTISGNGSIFASGAVSLDGNNLRLSSVFTLGGQAVIHAMANASLVLSSNASVVSGGRFVVDAAFTLNGTANTNTGNATDGQFGILPGASFVCADDCAFEAYGANIVNNGTIALGTHAAFRTDGYLRQRAGALLLGGTASVSAGLLVEGGMFHAAAGSRVVGPVSVSGGVFLLASTGNADAGSAASSINGNGTLASYVRESGGVTIDGSYLQRSPAILSVALSSTANASLPRSAFTQLNVTGLGVVGGYVSLSFAGAKVPLLDVQYRVGAFGGGVYGDLAIVPGQLLPPPLPSRIGNGVNVRVDIAGSERTMSLGFYRACPANCSGNGTCDVVTGECSCLPGFQGNDCSIAPFVVPTGCNVNGCGGNGVCDPYTGKCTCKTGYKGEYCSWNAIWLAIGLGLGVLFVLLFGGCMFVVLSHRKRREAKNAAVALQIDVEAEQHSTPVRPADGSLAGRAAWIDSAASVKSAKSTQSHLPIKLSAGTPSAFVPPRPAHTSHMSIPMYLDQEERGDDISEGVASVVSWEGQKPTALQHYYDERSATESARRARETGFDAPSLFGSVGDDTDNTDASVRSGAPQRTRRKMAQPAAPRDRKVPQLKARLPPTVVAVGLSDARDVQAQKRRSSGSSQSRQSGRSSSERSLAQALAADTQEQQVSQPVIPAAAIAGAIEPEKERKGRSRAMTTSERKAPVLIVNIEATSEVEKRAAEDSANTVMSLGGRSTPHEDVTMMVRIDNGPPELSANPQSSTFVPPGATDV* # PASA_UPDATE: g9699.t1, single gene model update, valid-1, status:[pasa:asmbl_762,status:12],[pasa:asmbl_763,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 18106 19782 . + . ID=g9699;Name=g9699.t1 NODE_11_length_71441_cov_43.4299 . mRNA 18106 19782 . + . ID=g9699.t1;Parent=g9699;Name=g9699.t1 NODE_11_length_71441_cov_43.4299 . five_prime_UTR 18106 18181 . + . ID=g9699.t1.utr5p1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . exon 18106 18283 . + . ID=g9699.t1.exon1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . CDS 18182 18283 . + 0 ID=cds.g9699.t1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . exon 18406 18464 . + . ID=g9699.t1.exon2;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . CDS 18406 18464 . + 0 ID=cds.g9699.t1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . exon 18571 19369 . + . ID=g9699.t1.exon3;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . CDS 18571 19369 . + 1 ID=cds.g9699.t1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . exon 19591 19782 . + . ID=g9699.t1.exon4;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . CDS 19591 19746 . + 0 ID=cds.g9699.t1;Parent=g9699.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 19747 19782 . + . ID=g9699.t1.utr3p1;Parent=g9699.t1 #PROT g9699.t1 g9699 MSSPAPSDLYSAVYTFLKSSNLNKSAEALKKEAPALSKDFDGDLMEIFTEGSAKKRKRETSESSEASPAAKKKAKADSDSDSSDSSSSSDSSSDSSSDSSSDSSSDSSSDSSSDSDDNDKKTATKGKAAAKPAAAAEKSSSSSSDSSDSSSSSSSDSSSDSSDSQSDKSDKKKKSSSSSSDSSSDSSDSSDSESDKSDKKKKSSSSSSSSSSSSSTSSDSSSDSSDDSDADDKKSKKKEKKPAAKDSSSDSSESSVEAMQTSTPAKAGALSSATTPSGDASESNDTSEGRRRAANKPFRRIDPTKVAVDNRLADNSFEGKRGAAGSWGEKANADLKHTRGKSFRHEKTKKKRGSYRGGLIDQNVYSIKFED* # ORIGINAL: g9710.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 65388 67320 . + . ID=g9710;Name=g9710.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 65388 67320 . + . ID=g9710.t1;Parent=g9710;Name=g9710.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 65388 65752 . + . ID=g9710.t1.exon1;Parent=g9710.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 65388 65752 . + 0 ID=cds.g9710.t1;Parent=g9710.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 65934 67320 . + . ID=g9710.t1.exon2;Parent=g9710.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 65934 67320 . + 1 ID=cds.g9710.t1;Parent=g9710.t1 #PROT g9710.t1 g9710 MLEAVLLLAKGSRGYRLVFHHPPRTAHTGAVASIFGYDEPLLAELLSPKSALCGRPFELVIDDRAFVGHPTLLLSSSSSSSSTCSSAQAKAVASAPVANAAHKEERWTMEMFNIVFVLRRSSARASSTFHTIAEQLATAIKHEEMRCGFLGSEVALITRIHDDALSSSHDGRPSLQQSTFGTQQQQHNGGAGGMQPPAGATGGAPSSAVASSTAQADIDAVRAAVATETLERSALARHIRDVYDGLGADGAGVVHLRINGWVSLGLCAGAPVAPHVTRTHLTCSPWACPLAAPPVVRPYHTILLHEDQSDLLRRLPADASPLLRRVIQLANPLRSLQDLSLDSGITIAQLLAVISHLLHWRLATVINTISKTSLFVVSPCADLDTHSAMMAAFDATFKSRTLPTTLAEFSFPQQLGQHLAPLRPDDQLEMVQVVLWLLRRRLLLQLNTYALLLLPSATDTQSQQSSQQSSQSRVDDPHVKGDAPESKAEGKAEKSRRLSANGDVTVDPMAIASSVLPSHVLAQIMRTKAAMNKRDLALFLRLVPYLDGRHCMEEIMWRENLGRGDVIVALTAFREVVVTCVHE* # ORIGINAL: g9697.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 10481 11623 . + . ID=g9697;Name=g9697.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 10481 11623 . + . ID=g9697.t1;Parent=g9697;Name=g9697.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 10481 11623 . + . ID=g9697.t1.exon1;Parent=g9697.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 10481 11623 . + 0 ID=cds.g9697.t1;Parent=g9697.t1 #PROT g9697.t1 g9697 METSDLAKGRETTENDMSQSIDESAADLEHASSEEGSSSAAITDAAAPLSKNQRKKIAREQKWEAKREQRKETRRQHRIARKERQREEKAVAVAAVAGTDGASGDGGNASTAAPPPKRFKKMADAVNSPTVVVDLGFDDLMTARDVKHLVTQVARCYSANRRSTNPFRFHLTSMGGKAKEHLAAIHGSEQWDVIVDTRPYEEVFARDSLVYLSSESSNVIMSLDPAKVYVIGGLVDHNHHKGLTFRLAQEKGIAHGQLPIGEYVRMQSRKVLTVNHVFEILSKYEEMKDWKAAFLSVIPQRKFAQNNHQNGGGAEDASSEVQPDASESALQPDAGESEVQPDASESALQPDAGESEVQPDAGESKVCSEKVAVQAPSPSS* # PASA_UPDATE: g9696.t1, single gene model update, valid-1, status:[pasa:asmbl_759,status:3], valid-1 NODE_11_length_71441_cov_43.4299 . gene 6497 10290 . - . ID=g9696;Name=g9696.t1 NODE_11_length_71441_cov_43.4299 . mRNA 6497 10290 . - . ID=g9696.t1;Parent=g9696;Name=g9696.t1 NODE_11_length_71441_cov_43.4299 . five_prime_UTR 10015 10290 . - . ID=g9696.t1.utr5p1;Parent=g9696.t1 NODE_11_length_71441_cov_43.4299 . exon 9443 10290 . - . ID=g9696.t1.exon1;Parent=g9696.t1 NODE_11_length_71441_cov_43.4299 . CDS 9443 10014 . - 0 ID=cds.g9696.t1;Parent=g9696.t1 NODE_11_length_71441_cov_43.4299 . exon 6497 9243 . - . ID=g9696.t1.exon2;Parent=g9696.t1 NODE_11_length_71441_cov_43.4299 . CDS 8157 9243 . - 1 ID=cds.g9696.t1;Parent=g9696.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 6497 8156 . - . ID=g9696.t1.utr3p1;Parent=g9696.t1 #PROT g9696.t1 g9696 MAATARLLASIAVVLAVSCACATGATFQAEVVIIGGGAAGIQAAKNLQSAGVTDVILLEAKSRIGGRVSESPLKSFADGSVLQNSDGNQVNVELGAAWLRANGASNPAFKLATASGIVSVLVNRTRAAVYYNGNVEVDGLTTSPRWRTAINATRGFAQLAQQFASGNRTDISLRSALRTLGWSPLGYGDAKNVSLSRVFDYFANEYERGDLAEATSLLYGNPSLAYAKYNSTAAGDRLVQDFRGLRKTLTDLAGAVFTNASRLRVNSPVASVSYGIPGALIDVTTEAGDVFRAKSVIVAVSAGVLRSGKITFTPALPAWKLSALDRIEIVSQVRAVFAFPAALWSGNTEFLLSASGDRGSYSVFHVLNSNNALGDVTLLEVTATGDEAARLEQLSDSDIAAEVSAALQKMFPTATATARTPTHYAISRWSTDERVLGAATVTPVGLDSNAAKDIAAPVGRIYFAGEHTSGVLSGTVQGALESGSVAADRVAACSKYGVCPALRSSEPPTCLSPPPIPAAVKGSGAATATSASLLTFVAAVIVSVAVAMCRFD* # PASA_UPDATE: g9701.t1, single gene model update, valid-1, status:[pasa:asmbl_764,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 22723 32990 . + . ID=g9701;Name=g9701.t1 NODE_11_length_71441_cov_43.4299 . mRNA 22723 32990 . + . ID=g9701.t1;Parent=g9701;Name=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 22723 22827 . + . ID=g9701.t1.exon1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 22723 22827 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 23000 23093 . + . ID=g9701.t1.exon2;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 23000 23093 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 23202 23277 . + . ID=g9701.t1.exon3;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 23202 23277 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 23473 23566 . + . ID=g9701.t1.exon4;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 23473 23566 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 23931 24020 . + . ID=g9701.t1.exon5;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 23931 24020 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 24210 24251 . + . ID=g9701.t1.exon6;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 24210 24251 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 24389 24464 . + . ID=g9701.t1.exon7;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 24389 24464 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 24637 24698 . + . ID=g9701.t1.exon8;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 24637 24698 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 24856 24929 . + . ID=g9701.t1.exon9;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 24856 24929 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 25128 25188 . + . ID=g9701.t1.exon10;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 25128 25188 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 25348 25474 . + . ID=g9701.t1.exon11;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 25348 25474 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 25610 25714 . + . ID=g9701.t1.exon12;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 25610 25714 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 25870 25920 . + . ID=g9701.t1.exon13;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 25870 25920 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 26021 26064 . + . ID=g9701.t1.exon14;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 26021 26064 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 26221 26324 . + . ID=g9701.t1.exon15;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 26221 26324 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 26473 26532 . + . ID=g9701.t1.exon16;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 26473 26532 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 26671 26725 . + . ID=g9701.t1.exon17;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 26671 26725 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 26864 26942 . + . ID=g9701.t1.exon18;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 26864 26942 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 27051 27493 . + . ID=g9701.t1.exon19;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 27051 27493 . + 2 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 27693 27787 . + . ID=g9701.t1.exon20;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 27693 27787 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 27941 28027 . + . ID=g9701.t1.exon21;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 27941 28027 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 28163 28316 . + . ID=g9701.t1.exon22;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 28163 28316 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 28413 28967 . + . ID=g9701.t1.exon23;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 28413 28967 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 29090 29184 . + . ID=g9701.t1.exon24;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 29090 29184 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 29343 29429 . + . ID=g9701.t1.exon25;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 29343 29429 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 29512 29665 . + . ID=g9701.t1.exon26;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 29512 29665 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 29761 30315 . + . ID=g9701.t1.exon27;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 29761 30315 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 30404 30498 . + . ID=g9701.t1.exon28;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 30404 30498 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 30645 30731 . + . ID=g9701.t1.exon29;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 30645 30731 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 30857 31010 . + . ID=g9701.t1.exon30;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 30857 31010 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 31099 31653 . + . ID=g9701.t1.exon31;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 31099 31653 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 31757 31851 . + . ID=g9701.t1.exon32;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 31757 31851 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 32008 32094 . + . ID=g9701.t1.exon33;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 32008 32094 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 32220 32373 . + . ID=g9701.t1.exon34;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 32220 32373 . + 1 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . exon 32463 32990 . + . ID=g9701.t1.exon35;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . CDS 32463 32789 . + 0 ID=cds.g9701.t1;Parent=g9701.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 32790 32990 . + . ID=g9701.t1.utr3p1;Parent=g9701.t1 #PROT g9701.t1 g9701 MSKPHHVLSLDVGSTSIRALIFDENAKCVSSSYAKTTRLYPHPGWVEYDPEMMWTQARHAISDAIAKSGLAAKDIASIGITTQRNTFLTWNKTTGVPLHNFISWEDLRASKLVDTWNKSAAMKSINMGAKLGHMISRNARLLAASKFHFLTNHVSVRLKWVLENVPQARELAAKRELRFGMIETWLLYKLTGGEVFATDYSNLSSTGLYDPFKMEWNSFVLNMLSLPTDIYPEVKDTSTIYGKTKADLFGAEIPIGALIADQQAALFGQCCFTEGDVKGTLGTGTFVNINTGRKPRASEHGLYPLVAWSLNGERTFMSEGLSSSCGSVVEWAQEMGFFEDAAKTSDMAKSVPDTNGVFFVPAFSGLQMPYNDPHARGAIIGLTFAARKEHTVRAMLESIAYRFKQLFDTIKGDFNIPITSVRVDGGVSRNDFLVEYISTMIQEPIIRAKQTEQTCIGAAYLAGLATGVWKSLDEIIALRDSTRVDPGARTAVHYEAYRTWKAAVSRARHWEQERRLVPHNDGASGTEDSDGPSAGNDGGDGGPPIRKAPTVTRAGSHVKARTNEYAGGKLRAAVPDDRVDWKVPMSKYKPVDYTAPVVEKGPVWADPDIRKPEVAGQVLIMFNALDGNVDRRSHEGEYDLINGLPRNYVGRTGMVGRGLLGRWGPNHAADPIVSRWQRTSNGEIVLRNSKPVLEFVCIQRKDTGQWAIPGGMVEPGDTVSATLKKEFGEEAMNTLEMSEAEQAVIHQRMEKVFGSGQEVYRGYVDDPRNTDNAWMETVAVNFHDETGEVFGQFKLHAGDDAGAVRWMAASSELNLYASHRDLVRKAVELRKAFWDGAGANVGVKAPTVTAVGSHVKARTKEYAGGTARFDVSDDKVDWKVALPNYAPVDYTAPVVEKGPVWADPDIRKTSVASRVALHFNALDGKVDRRSHEGEYDVILGLPRNFVGRTGMIGRGLLGRWGPNHAADPIVSRWQRTEGGEMVLRNGKPVLEFVCIQRKDTGQWAIPGGMVEPGDTVSATLKKEFGEEAMNTLEMSEAEQAIIHQRMEKVFGSGQEVYRGYVDDPRNTDNAWMETVAVNFHDETGEVFGQFKLHAGDDAGAVRWMAASSELNLYASHRDLVRKAVELRKAFWDGAGANVGVKAPTVTAVGSHVKARTKEYAGGTARFDVSDDKVDWKVALPNYAPVDYTAPVVEKGPVWADPDIRKTSVAPNDAPKFNALDGKINRRSHEGEYELVGGVPRNYVGRTGMVGRGRLGRWGPNHAADPIVSRWQRTEGGEIVLRNGKPVLEFVCIQRKDNGQWAIPGGMVEPGDTVSATLKKEFGEEAMNTLEMSESERVAIHQRMEKVFGSGQEVYRGYVDDPRNTDNAWMETVAVNFHDETGEVFGQFKLHAGDDAGAVRWMAASSELNLYASHRDLVRKAVELRKAFWDGAGANVGVKAPTVTAVGSHVKARTKEYAGGTARFDVSDDKVDWKVALPNYAPVDYTAPVVEKGPVWADPDIRKTSMAPNDAPKFNALDGKVDRRSHEGEYELDGGVPRNYVGRTGMVGRGLLGRWGPNHAADPVVTRWQRTEGGEIVLRNGKPVLEFVCIQRKDNGQWAIPGGMVEPGDTVSATLKKEFGEEAMNTLEMSEAEQAAIHQRMEKVFGSGQEVYRGYVDDPRNTDNAWMETVAVNFHDETGEVFGQFKLHAGDDAGAVRWMAASSELNLYASHRDLVRKAVEMRAAAW* # ORIGINAL: g9706.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 53324 54700 . - . ID=g9706;Name=g9706.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 53324 54700 . - . ID=g9706.t1;Parent=g9706;Name=g9706.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 53324 54700 . - . ID=g9706.t1.exon1;Parent=g9706.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 53324 54700 . - 0 ID=cds.g9706.t1;Parent=g9706.t1 #PROT g9706.t1 g9706 MVTLDAAADEADTLSATAPFVEKTESDSVTIGGGAETDDVVCEDDVSTDDNICEDDASTDDVVCEDDVSTDDNICEDDASTDDVVCEDDVSTDDVVCEDDTSTDDDICEDDASTDDVVGENDTCTDDVACEDDDVVCEDDDCRMPGPGVDTTPTAELCSVDETGALSVEGNVTGAGADDCKDEMAVTGMLSTETIDDNIVTVGGAVVIDCVRVTPIIEGDGSPLCADDDSPLKADDDSPLKADDVDSPLEAAEDAIDVIVGVRMVSSTDIICDCETASDVLEGDGVPSTVYVDIVAGDVGVSTADDSTPMLVATVTDDMPSAEDIIEDVDNKALDPNSVVTEGDADGISMASPPVTVPTLPTVVETDAESERLGEAANDDSLSMKDDCEKAVIVDVDTTPISVDNGCEGCTADAALSETAVTAAVEVTASVLIADDSVMGTTVETDAVTLAEVDGSGV* # PASA_UPDATE: g9708.t1, single gene model update, valid-1, status:[pasa:asmbl_770,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 56087 62591 . + . ID=g9708;Name=g9708.t1 NODE_11_length_71441_cov_43.4299 . mRNA 56087 62591 . + . ID=g9708.t1;Parent=g9708;Name=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 56087 59659 . + . ID=g9708.t1.exon1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 56087 59659 . + 0 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 59782 59897 . + . ID=g9708.t1.exon2;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 59782 59897 . + 0 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 60156 60301 . + . ID=g9708.t1.exon3;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 60156 60301 . + 1 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 60499 60671 . + . ID=g9708.t1.exon4;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 60499 60671 . + 2 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 60823 60993 . + . ID=g9708.t1.exon5;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 60823 60993 . + 0 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 61198 61402 . + . ID=g9708.t1.exon6;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 61198 61402 . + 0 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . exon 61551 62591 . + . ID=g9708.t1.exon7;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . CDS 61551 62218 . + 2 ID=cds.g9708.t1;Parent=g9708.t1 NODE_11_length_71441_cov_43.4299 . three_prime_UTR 62219 62591 . + . ID=g9708.t1.utr3p1;Parent=g9708.t1 #PROT g9708.t1 g9708 MDVQPVFGESLPRWMFFDYGGSEYKQMHADAAIELPEGAEGVSRLLGVATSDDFDEGRKSIYNVTFDLALAATDETTGQTAFVIFNVTVEIGAPVPLPFQARLILAGDPTEAMQRIRTVFAVGAFVWSALGPTAADVAPLAVGYVEYAEVSLTAGIIGISEAYQYDVTVSTATDVSARRVVAALIKPGTRPLLSAVILRGVVAVIILSQPASTVGATSSASASGTSVISTFVGSGMATATVGPNSLSVATDVQSSDASPSPSSWSASTPLRNTLDSLTPSPISIGSTSIASAGSSATDLALSATADFQAPSDAQAATTPAAALSDTPLPVSSASSSSLNTPAMTSPTESISVTASAVTASASAGGLGPVIVVEPYPAIRAVYSIGLFSVPVSSEPFLQLGNDAGVYALDVSTAEGDPLPNHLYFNKTTSVLYGSFVPNESAANVTVLVTAVGLGGENATTPLTVSIHPPDSNVTLAIRIRISGALSSFTFHRRVRVLSGIRSFLRSANVLFDESLSEFEGLSLSSSLRLLRVLSGSIILDWGTGDTSLGASNAAAISSAISAGVQDGSFAALLNETIESTSILWQPSDFDTANPTASAGVGTHVIVSVATATGTAGPTTPGSIDALFAASTGINKAERYGIIFGSIFGFFIILAIIIIIVIICLRRRRLRRKRQNTWKTADPTPLYLTKDEKDAVEDEPGTSEKPIDYLASSFIGFETLRQSSGVQISAAELRVLRHLEDLLLEDGLLVASALCDVAESGDVPDVAMRETVQALVCVFESNGVGQHLIRSAFGREIFSSVNPTSLFRADSVATTMFSTVADAYGRKYLRALLGPTIEHVTQNPRGLEPDKTKLSRRENWQDNLGRLLDVCQSLVDAIVGSADECPPVIRSAIYAAYAAINEHFSEAKYSAVGNLFFIRYVCPAIASPAAYGVADHPDDDSAHALRLVATLVHALAIRSDLGHRYPYLDNDAVKEFISANRPRVKKFLEDIAVLGHEPPLLYALPPAYGDSRTQYFTETVLLRSDALAMLKRLLLAGLPQVCSLLSRREIGHVLIETKAPLPADRFGEMRALLTRPLTEPGTEAALTAVLLDDSFAAVRSLCDAVQNYEADELANSLLLMFASAGQSERLLCALIERDVMSSATPAALFRGQGAGGRLIGIYLFTIGTAYIQETCGELIREIVEDPHSFCCEINPAKVGDPIELAENAERLMHLCKSFLECLFDAVDLMPQPLRNLCRYAYDFVLEYFPDDTFLGVGKLLLVRYIAAAIAAPHSYGICAEPPKGEAKRTLSLVTKVFQALANNAVFEKDTPLGHMHVMNEFVRFNIGVVQEYFSLVVSDDFVGPDFPVADIPDAVRYDALKRIRKYLAIYVDNTDFCRHFHFYVHATSEDDADMDIDVDLAQRLEAVLDGHVDFNTGAPDAQTSADAANAADLMAERDRAEQILSELDKSLNDASWADTIARAGSLPSARSIVPPIERSATSSKLGLPAHSSRAGTLTGRTTIGRGMAAIDRMVQEMQRDVREAEASLSTQNIATAPSQPHVTPIVIHPPEEDMANGAVPMNVDDGPSPSLSASSLSGWSPSQRKFNTERVGTTKTRPSAMEIFGSNARRRGSSPNIAEGGVSQPRSDLFVARGVFGSDGSIGALKKDGRKGSGTLRSVGASAPISFAQVLVTADGEETEERLV* # PASA_UPDATE: g9694.t1, single gene model update, valid-1, status:[pasa:asmbl_767,status:12], valid-1 NODE_11_length_71441_cov_43.4299 . gene 11 3789 . - . ID=g9694;Name=g9694.t1 NODE_11_length_71441_cov_43.4299 . mRNA 11 3789 . - . ID=g9694.t1;Parent=g9694;Name=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 3698 3789 . - . ID=g9694.t1.exon1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 3698 3789 . - 0 ID=cds.g9694.t1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 2636 3324 . - . ID=g9694.t1.exon2;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 2636 3324 . - 1 ID=cds.g9694.t1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 1686 2398 . - . ID=g9694.t1.exon3;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 1686 2398 . - 2 ID=cds.g9694.t1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 1241 1351 . - . ID=g9694.t1.exon4;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 1241 1351 . - 0 ID=cds.g9694.t1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 897 1016 . - . ID=g9694.t1.exon5;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 897 1016 . - 0 ID=cds.g9694.t1;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . exon 11 687 . - . ID=g9694.t1.exon6;Parent=g9694.t1 NODE_11_length_71441_cov_43.4299 . CDS 11 687 . - 0 ID=cds.g9694.t1;Parent=g9694.t1;3_prime_partial=true #PROT g9694.t1 g9694 MHTAGTPPIRRHVHLSSTLSPSAVLWIVACLTNCATSCAATLTGTTFRVNLTATNGDVIKGEFAFDGVGLGAQLLLALGPVNGAAGSLSGNTTLAYNRTSTGTFTGSTYLASALCLGQAGDEIRLVAGVYPTFQPPFAGMRFVGDGMSSTVILQQSAQTITIRAAISPVAYVGLYFSSSSSTSSITIDSGIATFNATRFSTSGNATPLTCDNGGAVSVLSSYFGKYSIVVSGTASVVTSRPGGALRIGRCKAIVMDSVFVSVTTNSHGGCIATAAGANLTVLRTTFNSCSSLSTTTRNGGSIYASAPNRIVIDYSTFHDSWSQSGNGGSIYIAGANSSVVISNTSFSLSDSYNSGGAVYVAASPSVEITDCSFDANSGNVGISLFFTEVPSTIITRATFTNGVGNWKGGVLHCEASAVASKLRMAGCNATGNYVRYNSINRQYGVAGALSLTGTNLSVVVTGSVFENNMALDDSDGGVVLVEGSVAATFANCIFTNNVGYYGSVFLLRGSSASLCDQCTFLNNNGDMGAIYSEETASIEVTNTLFKSNKGSTSACIYTTASAMVAVNGTSFVGNSAVQGSAIAIDNAASVSVVLRNSNFINNTADEDGGAIYVYLTRRQTRPYLSIFGGFSSGNAAAQGGFLWAVSTIGLNESSPAIVLDGMTIEYATASTKGGALYIDNTVCVAVLNSRFSGCSADNGGTAYLGGESLTILSNTVVESGRAVSGGGFTVTESSTLKTRQRCAFLRNVAKGGGGGLSVQFDGLIVMDDVVAVGNRAVIGGFIALSGEAVARLRNSHIRDC # ORIGINAL: g9709.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 62667 65012 . - . ID=g9709;Name=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 62667 65012 . - . ID=g9709.t1;Parent=g9709;Name=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 64969 65012 . - . ID=g9709.t1.exon1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 64969 65012 . - 0 ID=cds.g9709.t1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 64811 64876 . - . ID=g9709.t1.exon2;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 64811 64876 . - 1 ID=cds.g9709.t1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 63889 64704 . - . ID=g9709.t1.exon3;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 63889 64704 . - 1 ID=cds.g9709.t1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 63667 63779 . - . ID=g9709.t1.exon4;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 63667 63779 . - 1 ID=cds.g9709.t1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 63086 63198 . - . ID=g9709.t1.exon5;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 63086 63198 . - 2 ID=cds.g9709.t1;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 62667 62843 . - . ID=g9709.t1.exon6;Parent=g9709.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 62667 62843 . - 0 ID=cds.g9709.t1;Parent=g9709.t1 #PROT g9709.t1 g9709 MAGVWSIVRLAIASRILTLFIQAVFNVAVLDYDTSPSLSNEALFGTRGVVDGPVLCILGGLHRWDGVHFMGIAAAGRYEHEQSHAFFPLLPAAIRAVDAVLFEPVRYACAQWQLDPLIGREACLIISGAIVANVSFVLAAAGLFLLTMEVCGREALAFAAALAFCANPASVFMSAVYSESAFAALSFWGLLCLERYVRCGRWGDAFGASLLLAAATCTRANGIMTALFPAWLACRGVWTCLSRSNVVAVSTRTSLQQAAVGVFVCICAILPFVALNAHAYFRFCANDEPRAWCSWTLPSVYSFVQSHYWHNGFMRYFRVKQLPNFILAAPMTILCLMGVVWAFSGAVGTPALTGVDASFGLRALPYAAHLLALVLGGVLFMHVQVLTRFVACASPAIYWFVGQLWLDLLAGRRVKRARFVSFYYAAYFLLGPLVFSNFYPWT* # ORIGINAL: g9700.t1 original gene structure, not modified by PASA NODE_11_length_71441_cov_43.4299 AUGUSTUS gene 20157 21928 . - . ID=g9700;Name=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS mRNA 20157 21928 . - . ID=g9700.t1;Parent=g9700;Name=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 21892 21928 . - . ID=g9700.t1.exon1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 21892 21928 . - 0 ID=cds.g9700.t1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 21571 21758 . - . ID=g9700.t1.exon2;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 21571 21758 . - 2 ID=cds.g9700.t1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 21304 21435 . - . ID=g9700.t1.exon3;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 21304 21435 . - 0 ID=cds.g9700.t1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 21041 21102 . - . ID=g9700.t1.exon4;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 21041 21102 . - 0 ID=cds.g9700.t1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 20482 20564 . - . ID=g9700.t1.exon5;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 20482 20564 . - 1 ID=cds.g9700.t1;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS exon 20157 20293 . - . ID=g9700.t1.exon6;Parent=g9700.t1 NODE_11_length_71441_cov_43.4299 AUGUSTUS CDS 20157 20293 . - 2 ID=cds.g9700.t1;Parent=g9700.t1 #PROT g9700.t1 g9700 MSSAPVDMARWEDLRKDARQLENDIDLKLVSFGKLSSGYGSEGHSSSDKMPLLGGASGEHLFDTMALEIEQLLVKLSAVNDEMSSFVMRCPTPSPALSHNLQRHADILNDYTQEFRKAKTNYSAHRDREDLLGSVRRDISIALATKENLTSQRNVFTNISGRVGGIFGRFPALNNLMQRINIRKRRDTLIIGSVISACIIILLLFKFGGSSA* # PASA_UPDATE: g3486.t1, single gene model update, valid-1, status:[pasa:asmbl_372,status:3], valid-1 NODE_10_length_75532_cov_43.7532 . gene 57999 61126 . - . ID=g3486;Name=g3486.t1 NODE_10_length_75532_cov_43.7532 . mRNA 57999 61126 . - . ID=g3486.t1;Parent=g3486;Name=g3486.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 61086 61126 . - . ID=g3486.t1.utr5p1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 60913 61126 . - . ID=g3486.t1.exon1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 60913 61085 . - 0 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 60757 60826 . - . ID=g3486.t1.exon2;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 60757 60826 . - 1 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 60501 60546 . - . ID=g3486.t1.exon3;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 60501 60546 . - 0 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 60315 60403 . - . ID=g3486.t1.exon4;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 60315 60403 . - 2 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 60095 60188 . - . ID=g3486.t1.exon5;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 60095 60188 . - 0 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 59861 59953 . - . ID=g3486.t1.exon6;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 59861 59953 . - 2 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 59561 59714 . - . ID=g3486.t1.exon7;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 59561 59714 . - 2 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 59021 59442 . - . ID=g3486.t1.exon8;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 59021 59442 . - 1 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 58732 58887 . - . ID=g3486.t1.exon9;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 58732 58887 . - 2 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . exon 57999 58548 . - . ID=g3486.t1.exon10;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . CDS 58466 58548 . - 2 ID=cds.g3486.t1;Parent=g3486.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 57999 58465 . - . ID=g3486.t1.utr3p1;Parent=g3486.t1 #PROT g3486.t1 g3486 MKMAVKSLMLAVAVLVLAGIASASPLGTGADADRVGGLPGLSTAAQKISHYAGYLSTDSTGDKQLFYWFVESANNATSDPLVLWLNGGPGCSSLYGLFYENGPFRFLDGPDGDNQQLDVNPYAWSQVANVLYLEAPAGVGLSYSGNKADYNTSDSATARDNYGALLAFFAKYPQYLANDFYISGESYAGVYVPTLSREVLHGNKAGSATQINLQGYFVGNGCSDMELDSEAAYTFLHGHSIIGNELYEKIDHACHGSYSHPSPACRSLTAHADSIASGLCVYNVLWDQFQQTAQTTNPVFAPLAASRLRGTPPCIDSARLVSYMNAASVRSAVHAAPVSNIGQWAMCSDKLNYSSDLYKLSMIPIHAELTSNGIRALIFSGDQDLSVPHTGTEAWIDALDLSPKSEWRPWVVDGQVAGFTQEYEHLTYATIKGAGHMVPYYKPIQSLAFFERFLRKESL* # PASA_UPDATE: g3480.t1, single gene model update, valid-1, status:[pasa:asmbl_377,status:3], valid-1 NODE_10_length_75532_cov_43.7532 . gene 23903 26981 . + . ID=g3480;Name=g3480.t1 NODE_10_length_75532_cov_43.7532 . mRNA 23903 26981 . + . ID=g3480.t1;Parent=g3480;Name=g3480.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 23903 24072 . + . ID=g3480.t1.utr5p1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . exon 23903 24345 . + . ID=g3480.t1.exon1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . CDS 24073 24345 . + 0 ID=cds.g3480.t1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . exon 24445 25024 . + . ID=g3480.t1.exon2;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . CDS 24445 25024 . + 0 ID=cds.g3480.t1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . exon 25160 25289 . + . ID=g3480.t1.exon3;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . CDS 25160 25289 . + 2 ID=cds.g3480.t1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . exon 25460 25593 . + . ID=g3480.t1.exon4;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . CDS 25460 25593 . + 1 ID=cds.g3480.t1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . exon 25771 26981 . + . ID=g3480.t1.exon5;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . CDS 25771 26726 . + 2 ID=cds.g3480.t1;Parent=g3480.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 26727 26981 . + . ID=g3480.t1.utr3p1;Parent=g3480.t1 #PROT g3480.t1 g3480 MTSPVCESGSRHAIARCTDASFTVGVSVALPEETEEDIRAILAHAFASSAVELERERTTTQRIGEYEVGRRLGKGNFAEVRAAVHSGSKAKVALKLVEKFWSDEDSGRRHSSSATAGGSEESKEEQHVVREAAILRRLSNRSRGLGCRGGCHPNIVRSFDFIDTDAFIGVALELIPGKPLSDFVSSYSASASASASKSARALSTSRWVERRITPGKASAVECDSLETAPASVAHPCGALPEKLTRRIARQILSAVEFMHGANIAHRDIKLENIVISENLDVKIIDFGCAAVFDERSRLKTRCGSAAFMSPEMHSGGEYCGPDVDVWSSGVVIFSMLAGHLPFDEGSNGDLAAFHTAASTSGYTIHLPRSTSEDAWSFLASIFQHDPKHRCAARDLASHAWLCAGSDRHPGGLSGRLPRNRVLASRNTNKRASEKRQRRRVSEAALLGNNGNNDSDGEVCVSSTRPSILATAAFPLIVRTGDDASRSKKVAAWCDDADTNAADSDDDCRPLCAKPPPEKLHHAHRSMRLAAAQMQSSAAGDHYDGDASADEDRELNDLVNVSRGCADIGMRGRVSVKKAPSSRVNIAGLCGGDANSFRLPSIGRRDGCLGESLPTARRVRGGRSPLGVLTRGTREAAAQRERNGDTGAGDADTASSTCDGPQVAAMQPSTELPSTSRFLPPVRTLGYRRER* # ORIGINAL: g3479.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 20614 22827 . + . ID=g3479;Name=g3479.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 20614 22827 . + . ID=g3479.t1;Parent=g3479;Name=g3479.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 20614 22827 . + . ID=g3479.t1.exon1;Parent=g3479.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 20614 22827 . + 0 ID=cds.g3479.t1;Parent=g3479.t1 #PROT g3479.t1 g3479 MGGFECSLVCWTVVRRRRHPGTYPAARPTTARDKQPHIRAAECNTDHVRVALQPKAPYTHNASAGPHVPVVIISEGDKPVRVGSRAKYVRPLPERPPVDLLRLNEIKKNAAVPLTRESYQTKLHAQLDLEEIGQKRALEQYDMSEAVFKSKEGPLLWLHVPGVREKRPSVAEGNRILMRVAGEAAGRAHLGYVHRVSDCNLAIHFARSACDSIEAGITRVWIRFEYSALVSRLCHRAIDQSVVDPDAFSARFFPSPQPHINPRPPAAPKQPPLPSLHATGNSRLIVTELNEEQTIAVACIAAMAAPRMAPFILDGPPGTGKTTTLVAAIIEVLARTVRPVLVCAPSNSAVDHLAFKLHECIQRYGTGKGGRMLRLQARSRPKGTIRGAYARLMTQLSQPHMPDSGYEPLPKEEVAAKDIVVCTLSTAASLYSLGLDASHFSHIFVDEAAQAHEQVTLCAITGLSDTSTQIVFAGDHKQLGPVIQSAAAERHGLGVSIIERLISTPAYSDRSAGNTVKLVRNYRAHAALLEVPSRLFYGGELIAMKSAEHNDLVGFRGQNFPICIHDVAGHREMREAGSSSWFNIEEVEAVCDIVRELVENVSFSPRVQAHQIAVITPYHKQAAKLGEALAASFTDGKSVRVGSVEKFQGDESRVVIFSTVRSGQGTAGHRKSAKLAPFVACPKRFNVAITRAQSLLVVVGNLKALRKDRNWNTLITWALTKGQPTRTLQTATKSRRR* # ORIGINAL: g3474.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 2736 9054 . - . ID=g3474;Name=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 2736 9054 . - . ID=g3474.t1;Parent=g3474;Name=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 8683 9054 . - . ID=g3474.t1.exon1;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 8683 9054 . - 0 ID=cds.g3474.t1;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 7932 8039 . - . ID=g3474.t1.exon2;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 7932 8039 . - 0 ID=cds.g3474.t1;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 7678 7693 . - . ID=g3474.t1.exon3;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 7678 7693 . - 0 ID=cds.g3474.t1;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 3991 7496 . - . ID=g3474.t1.exon4;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 3991 7496 . - 2 ID=cds.g3474.t1;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 2736 3758 . - . ID=g3474.t1.exon5;Parent=g3474.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 2736 3758 . - 0 ID=cds.g3474.t1;Parent=g3474.t1 #PROT g3474.t1 g3474 MAGMIVLAERGFTKLVDCLAPLCLSVSLGTLIVCPTKEKINSAEDTLDEAQRERLPVVEVELLRWDEGWVRGCLVGDLRTLWDAYPLLSNTNMNAPAEYKSHRHIKGILSQRDERKSLNPKRASCIQPRLFKTSAKMEGGRFKHRRFEEAVQSVLFAMVKDNDPPGILNYICLFIEDIQLLSFSWIHQFGFTPLPELFSFEYAGPEGDYPAWNALFWAFFSLVALTMAAAFYIGVSYNRGKFDSTIPVRILRLTSLLISTLLLMPILSSFFQAFICEKDDEGEYSMTHFEGIKCFSGSHLPVLILSIIGAVVMILYAIVMSSICFEPDPRSHMPNAKPHGRTDTAYVIVRVILTAVYEFCSEDRTGNSVKLAVGFILISGLCCMVLVYQPFYSPRMTDTRAGFFFAGLGSMVVAIGTFAADGDGKAAFGMLVALTPVFFAFGFYLSGVARRRITRGIYSRLAVAPPVRMLSRHASHFNKRDMAGYAATGDTPTAKGRWTLAGIEQITAHKTKVTAPVFNRITDVEIAARFLRTNRDPDAILLAHDLFAIALQEFPHSPLLRIIHARYIGGYSGQATAARKQLEAAMAMKPGFDIRCLLFMEWRTLQQEKHTEAELGIDKQLSITSYIQFQMTQAGARRHHIESMRLALLFWRAANCPVVDPDVIFFHLYDLSASRKKAQYHYEQLLSNYPKSKTNLRLYAHFLTHVCNEPDKAQDFTTAAGLIEDEEMRKTVARSRMMQVKHEEDGEGDGDFKMDVSDDDESGGDSCDPYESGSDQNNNNNNTNNNSNSNYNSNTNDDDIGRGVDKLRRPSVQSGVRYRKSPQGSVDMDLGGAAGGVGVGNDTQLTVAVLESDAVAMDDGVGGAGHAAYSDRARDIHGNNHGSNSSDGDSDEESAGFKVAITDVDAEPSSVNPIFTGGDELEFGRLPLRNGSGGEARRPSVAFEMPGGSRRPSVAFEMLGEARRPSIAFERSAEGRRPSAVAFEMKYLGPDKITGDTEDQRSTVSFTASKRAVPDVRVNLEDNQTYEPEPIVLIERLQQHVKGDAGGGGGGNGGKARSSASFASSSSRSSSSQRLRKQRIETRLTRPATRERVKGIVMWLALVGLIVAGYLVSLNTFDEQTTRLDGLKTGTRPRRILVSTFLNTRELVRSVGLGDTATYAKMAAALVTDIDRYETIGVQQYMIDTDTKVPRVKVTRQILPSEPQAMEMMTALDAMLLLMKNARIVAATPFSVANSTNLLWNPAVRFVLDNGLAINVAVDEEMNDLELNFDRASKRTDQINYILMAIFLLIDVGIIAVVFWPLWKGVMERRTRMAAVLMLIPRGQINETVNTLDEELQSLLLMVPEDAEQTGLVANADASESAEGMYAQQQQAALFGAEGAPALSLNPGVAGESIEKSTIRKSKIRIWMRLVGLVVVVGAFAVGMYAVTFEQTNNSNRMARLLNLSNSRRYRAEGVTALANELVAGDNTTWMPLEARAVMLDWINTLDRIHRDCLLGKAATPSTFDVPGLYPELTGGNVCHVNAGCDSRKYDPSMGITKDLAFLPLNRLIQHFLDTARTYAHSAGPYAYSDPPRNVLAFLTSDIRDGLNNTDFIILNSVANSIGSSRTVMTVMFGFTLAALVVLLIWGVVVTTLRFEREMTQCVRLFFDLPLSVLLSVPQLRRFIESGGNLEKKY* # PASA_UPDATE: g3490.t1, single gene model update, valid-1, status:[pasa:asmbl_374,status:3], valid-1 NODE_10_length_75532_cov_43.7532 . gene 71285 75018 . - . ID=g3490;Name=g3490.t1 NODE_10_length_75532_cov_43.7532 . mRNA 71285 75018 . - . ID=g3490.t1;Parent=g3490;Name=g3490.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 74868 75018 . - . ID=g3490.t1.utr5p1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . exon 73506 75018 . - . ID=g3490.t1.exon1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . CDS 73506 74867 . - 0 ID=cds.g3490.t1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . exon 73266 73353 . - . ID=g3490.t1.exon2;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . CDS 73266 73353 . - 0 ID=cds.g3490.t1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . exon 72500 73113 . - . ID=g3490.t1.exon3;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . CDS 72500 73113 . - 2 ID=cds.g3490.t1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . exon 72309 72363 . - . ID=g3490.t1.exon4;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . CDS 72309 72363 . - 0 ID=cds.g3490.t1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . exon 71285 72140 . - . ID=g3490.t1.exon5;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . CDS 71365 72140 . - 2 ID=cds.g3490.t1;Parent=g3490.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 71285 71364 . - . ID=g3490.t1.utr3p1;Parent=g3490.t1 #PROT g3490.t1 g3490 MGQNQTKEFPYAIGERVPGDGDALWAVHDGTAKADGTPVTIFAFDMMSRADKLAAARNAFRRLKTMRHPNILRFIDGVELPNMMYMVTEHVRPLMLALRQHGGEDAGQEAAIAWGLHQLAKALSFVNGDCKLIHGDICSASVFVDGSGEWKLGGFDALVGADDDCDFAVIPAHVRYRPPEIARQGRMDKRNPPHSADSWGLGTVIWEAFNGQLERAEALADAGRIPRSLVPRFRDLTSANARTRASAAQFLKDAMQPSGFLCNPFVETSLFLEELQIKDPGEKADFFRRLPDVMDSFPPDACRHKIFPLLVGAIEYGSGGSQALTSLLKAAKWVSSEEYEKKVVPVVVRLFSSTDRALRMQLLQHIDSYGEHLKPAVVDQQVFPQVMNGFADASPVLREQTIKSMLVLAPKLSERTINNHLLRNFAKLQMDEEPGIRTNTTICLGKVAQHFSDVTRKKVLIPAFLRALRDPFPPARSAGIMSLVATQQFYTPEDIATKIVPSLSPAMLDPEKDVRAHVFSALRGFIARVDAASNELASRAQAAGAATSLSSAGTGAEGSGGDAQGWAGWAYSSVNSVAKKLIASRAGGETASIPQGISGDARSIPAAQPVMANVAAQATPPAHKAQFASQAASSRASMTQKQESEMFQALERAGDGPQKGGRGEDEWDGGDWDNGWDSKGTAASARMQVPAASTKGQEDGWDNDAWEPLEDTPKAAAGLTAAKSLSQPAKPSAPLSTTTAQRPSSGLSAVASAPPPSYSSLASSAATGSPSLAASSAAASVPSSQRSSSSSLSGGGMRLGKSANAAAPSQAASSLRASTAAPEPINWAAAVSTPAAAGGWDVQDNNGADGDWGWDGQQMQTQPPGKSSLPSSTAAPVASGQPAGIKKVSVPGASSGHTASAASGWGDWDGDGENGADESLGEGDKAENMRRRAEERRQRQLAQREEKARAPPKKVGLGAVRKAA* # ORIGINAL: g3482.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 28942 29605 . + . ID=g3482;Name=g3482.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 28942 29605 . + . ID=g3482.t1;Parent=g3482;Name=g3482.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 28942 29049 . + . ID=g3482.t1.exon1;Parent=g3482.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 28942 29049 . + 0 ID=cds.g3482.t1;Parent=g3482.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 29468 29605 . + . ID=g3482.t1.exon2;Parent=g3482.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 29468 29605 . + 0 ID=cds.g3482.t1;Parent=g3482.t1 #PROT g3482.t1 g3482 MLDEMHDPTTRPERQALFNEIDKDGSGGVDFDEFLGLVELVMSGKTDPNTGFGGLFTKTAIRATRLAAKLNVGAQLESGLI* # ORIGINAL: g3484.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 35158 38151 . + . ID=g3484;Name=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 35158 38151 . + . ID=g3484.t1;Parent=g3484;Name=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 35158 35167 . + . ID=g3484.t1.exon1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 35158 35167 . + 0 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 35239 35368 . + . ID=g3484.t1.exon2;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 35239 35368 . + 2 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 36234 36378 . + . ID=g3484.t1.exon3;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 36234 36378 . + 1 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 36573 36788 . + . ID=g3484.t1.exon4;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 36573 36788 . + 0 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 37010 37167 . + . ID=g3484.t1.exon5;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 37010 37167 . + 0 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 37277 37540 . + . ID=g3484.t1.exon6;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 37277 37540 . + 1 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 37731 37852 . + . ID=g3484.t1.exon7;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 37731 37852 . + 1 ID=cds.g3484.t1;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 38030 38151 . + . ID=g3484.t1.exon8;Parent=g3484.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 38030 38151 . + 2 ID=cds.g3484.t1;Parent=g3484.t1 #PROT g3484.t1 g3484 MLIGDVRAAADIFDYYGGLAASHASLGTFSSRVADAGDNHSFVYVRSEKSPSSAVLLAELAVKFGHLHHGAFNVVLGGGDVGSLLASHPAVGKVSITGSVPAGIAVGRAAFAIDQSRDSDGRYSSSHSLKRLTLELGGKSALIIVGDADIDKAADVAIAANFYNNGQVCSNGTRVFVQKSAMLKFLEAVARKVHSDVLVGDPMDSDVTMGPLIGRDSYERATNAVNTAVAAGARVVTGGAMWAGVRVLGSMNASEAEPGVRQVGLARGYFFPPTVLANCKDDMPVVRDELFAPVMSVLEFDTIEEAVRRSNDTPYGLAAGIFTESLTTAHSVAAALKCGVCYINGYNAGPAEMPFGGTKMSGVGRENGLAAIDEYTTLKSVHVSMPSE* # ORIGINAL: g3483.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 30412 33195 . - . ID=g3483;Name=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 30412 33195 . - . ID=g3483.t1;Parent=g3483;Name=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 33144 33195 . - . ID=g3483.t1.exon1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 33144 33195 . - 0 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 32754 32871 . - . ID=g3483.t1.exon2;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 32754 32871 . - 2 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 32514 32566 . - . ID=g3483.t1.exon3;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 32514 32566 . - 1 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 32102 32211 . - . ID=g3483.t1.exon4;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 32102 32211 . - 2 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 31657 31764 . - . ID=g3483.t1.exon5;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 31657 31764 . - 0 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 31342 31491 . - . ID=g3483.t1.exon6;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 31342 31491 . - 0 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 30839 30994 . - . ID=g3483.t1.exon7;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 30839 30994 . - 0 ID=cds.g3483.t1;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 30412 30477 . - . ID=g3483.t1.exon8;Parent=g3483.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 30412 30477 . - 0 ID=cds.g3483.t1;Parent=g3483.t1 #PROT g3483.t1 g3483 MASPSADLDELKLPELQDIAANLGINRWGRKQDLIERIRAGKDGAVSDGSVTKSPSRSRSKSPSRRAARSPKKDAASPKSPAEQHAHHDDSITQQVLPEGYVLVSHNKDRIRHATEWMRSSRTVCNFLVLMEFLYVLSVKGPLFEQLEMDGKANRGFMPPFTAKFYHPMYYTHLFYWVFFYFFLPLLIAVIFNWETKIGVSKAQRPKFSVLTFAITRYCLFYIYESSPITKVVFQYVDYRTFTVTCAVTVIMAFWDSIRYVASSQIEHRA* # PASA_UPDATE: g3478.t1, single gene model update, valid-1, status:[pasa:asmbl_376,status:3], valid-1 NODE_10_length_75532_cov_43.7532 . gene 18715 19837 . + . ID=g3478;Name=g3478.t1 NODE_10_length_75532_cov_43.7532 . mRNA 18715 19837 . + . ID=g3478.t1;Parent=g3478;Name=g3478.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 18715 18811 . + . ID=g3478.t1.utr5p1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . exon 18715 18826 . + . ID=g3478.t1.exon1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . CDS 18812 18826 . + 0 ID=cds.g3478.t1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . exon 18946 19032 . + . ID=g3478.t1.exon2;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . CDS 18946 19032 . + 0 ID=cds.g3478.t1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . exon 19203 19266 . + . ID=g3478.t1.exon3;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . CDS 19203 19266 . + 0 ID=cds.g3478.t1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . exon 19378 19439 . + . ID=g3478.t1.exon4;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . CDS 19378 19439 . + 2 ID=cds.g3478.t1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . exon 19595 19837 . + . ID=g3478.t1.exon5;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . CDS 19595 19705 . + 0 ID=cds.g3478.t1;Parent=g3478.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 19706 19837 . + . ID=g3478.t1.utr3p1;Parent=g3478.t1 #PROT g3478.t1 g3478 MTITMSFLADLPSFDRNNFANIQNHRYGDSFKPSYHGKPLTYTPTHDRTQPPPDQQITTEKTNILLRYLYEQLETKSGAGAASVGAAGKRDMHEADLLSETPLPPSKYARRD* # ORIGINAL: g3481.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 27708 28633 . + . ID=g3481;Name=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 27708 28633 . + . ID=g3481.t1;Parent=g3481;Name=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 27708 27783 . + . ID=g3481.t1.exon1;Parent=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 27708 27783 . + 0 ID=cds.g3481.t1;Parent=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 28130 28261 . + . ID=g3481.t1.exon2;Parent=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 28130 28261 . + 2 ID=cds.g3481.t1;Parent=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 28512 28633 . + . ID=g3481.t1.exon3;Parent=g3481.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 28512 28633 . + 2 ID=cds.g3481.t1;Parent=g3481.t1 #PROT g3481.t1 g3481 MGCTPSYPLELDPVRHVDQIFYSSTGSLHSALQAERVKAESKYTFLQKTFWQKLIEHREKLASIKRSLEDMDYKEIASRWPQFKEGEIAVFHLQFKTCDLNNDGRIDIK* # ORIGINAL: g3488.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 64210 65172 . - . ID=g3488;Name=g3488.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 64210 65172 . - . ID=g3488.t1;Parent=g3488;Name=g3488.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 64210 65172 . - . ID=g3488.t1.exon1;Parent=g3488.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 64210 65172 . - 0 ID=cds.g3488.t1;Parent=g3488.t1 #PROT g3488.t1 g3488 MDVVNAQPLGGASTLMAEIPASADAAAVAAVQQQPAQPAAPTRKRKLMEAHNIGYLSKIHVSDLGLDEAPETDILERAGYSVARFEYYNVFKRIMPVRRIQHQAHGNIVEWPRSDIFRAAGIKGDNMSKLSEEDFHRRDVNGREMVTLETQGVIKLLEFARKKEKSRFKAFFDTVADVQRVRFRLREKIANKAKGDEKPSPHPLAAAQQMMGVIPQYNPGGGSFTPARPPVAAVPNLPFGIVVRRLGMRRGGHFVPVRPDTDVRDIIRMASDALKVEISQVRDAVYEAIITSTALLKEGSVVYATTEEEERKEFGVAGKK* # ORIGINAL: g3473.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 1 890 . - . ID=g3473;Name=g3473.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 1 890 . - . ID=g3473.t1;Parent=g3473;Name=g3473.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 783 890 . - . ID=g3473.t1.exon1;Parent=g3473.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 783 890 . - 0 ID=cds.g3473.t1;Parent=g3473.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 1 436 . - . ID=g3473.t1.exon2;Parent=g3473.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 1 436 . - 0 ID=cds.g3473.t1;Parent=g3473.t1 #PROT g3473.t1 g3473 MARRDDRNGGGTGASSSPAASVSHAQLSAEDERALANGVITMKVVVVSCLGLAKKDIFGSAYPYCRAWIDGGLQEQQTTVKKRTLSPYWNEEFSFRVVPSRSVFHLHVYDHNRVTRDDFLGQVEIPLSVLPIRGNELGNPAANRPIELGLKPRNSRNRVKGTLTIRVCFVIPSPVTPSPVA # ORIGINAL: g3476.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 13729 15952 . + . ID=g3476;Name=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 13729 15952 . + . ID=g3476.t1;Parent=g3476;Name=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 13729 14134 . + . ID=g3476.t1.exon1;Parent=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 13729 14134 . + 0 ID=cds.g3476.t1;Parent=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 14348 14486 . + . ID=g3476.t1.exon2;Parent=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 14348 14486 . + 2 ID=cds.g3476.t1;Parent=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 15085 15952 . + . ID=g3476.t1.exon3;Parent=g3476.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 15085 15952 . + 1 ID=cds.g3476.t1;Parent=g3476.t1 #PROT g3476.t1 g3476 MFRSALVSARGCTMPLVGGLVHPPTPVINQSALISAIRTLKTKAKATEWTTSPERTAMLKKAERSTLLWGSAMVGIFLGGTYLLQKREASASAADHMKEFIPRPLVLAGPSGAGKSTLLKRLLAEYPDVFGFSVSHTTRKPRAGEVNGRDYHFTSREEMIQGISEGQFIENAEFSGNMYGTSICAPAYDRPTRTHLFRAVAQMEGESLNMKNDTVWTWLQPGGPQHFYEQYFWLFLGSVVSYPFVIFGLQHYMKDKKPFDLRRPLVLWNFALAVFSLLGAIATVPPLLERLSRRSIQEDVCDPLVFLHPAYKWVFWFNVSKVVEFGDTIFIVLRKRPLIFLHYYHHIVTMLFCWYANQHDAEWTGAGWYFASMNLVVHSMMYSYYGFAAMGFRMSWNTFLTSCQILQMVGGTVVVYKTSQCTKINEFEVAFGGLMYLSYFILFAQFFVDKYIRKQSPTSAKGKAVKGKAE* # PASA_UPDATE: g3489.t1, single gene model update, valid-1, status:[pasa:asmbl_373,status:12], valid-1 NODE_10_length_75532_cov_43.7532 . gene 66185 70816 . - . ID=g3489;Name=g3489.t1 NODE_10_length_75532_cov_43.7532 . mRNA 66185 70816 . - . ID=g3489.t1;Parent=g3489;Name=g3489.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 70718 70816 . - . ID=g3489.t1.utr5p1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 69868 70816 . - . ID=g3489.t1.exon1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 69868 70717 . - 0 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 69416 69689 . - . ID=g3489.t1.exon2;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 69416 69689 . - 2 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 68712 69234 . - . ID=g3489.t1.exon3;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 68712 69234 . - 1 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 68466 68485 . - . ID=g3489.t1.exon4;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 68466 68485 . - 0 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 68202 68313 . - . ID=g3489.t1.exon5;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 68202 68313 . - 1 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 67858 67972 . - . ID=g3489.t1.exon6;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 67858 67972 . - 0 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 67591 67720 . - . ID=g3489.t1.exon7;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 67591 67720 . - 2 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 67370 67459 . - . ID=g3489.t1.exon8;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 67370 67459 . - 1 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 67053 67184 . - . ID=g3489.t1.exon9;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 67053 67184 . - 1 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . exon 66185 66897 . - . ID=g3489.t1.exon10;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . CDS 66222 66897 . - 1 ID=cds.g3489.t1;Parent=g3489.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 66185 66221 . - . ID=g3489.t1.utr3p1;Parent=g3489.t1 #PROT g3489.t1 g3489 MKVEQRPSWTANCPTALALLIAFACICRASATTSHYKIGILYPLASTDPNFNTYGEELNDIADMVVAMVNNRSSALINSLMVSNITLEAIRRDEASDQQTALFSAISFHTDDNIDVVIGADWSAASMITNFYLSKVGVVQISASSTSTALQDRSLYPTFMRTVPSDALQGKALAYVVRSFGWDNVATIGADDDYAKPLIAKFREAAEGLNVTVVQSQQVSRTADPTAQVLAIKASGAKIILVVCFMELAKAILDEFAAQGMATSEYVYIGTDGWIYRTVFAEIGLVDFQGAILGTLPFFGSGPSLERMLDEMTAFKATHPQQMQQFDPAARELYSPFQPYMYDAVVTVAAALSKFRHANKTLPADFADLYTLMNSVAFEGTTGAVKFSDGERLGQYAIINHPPGLNGMVTVGNYDAVDSNRVSLDANTRIVWGQGSTRVPTDAICVPACSAHGVCTKVLRVGVCQCSPDWQGLTCAEAASSSSSTNIARIVGPVVSVTGAVIVAVVIAFFIVLGQKKMAIKVGTRQRRHVIDFAEIVVLDRIGIGAYGEVFRGTFRNTEVAIKKIRWDVVTEEQERRKSNARKGSIVRTMQAQLSMLSSKESASSTTPQQAFLAEIDVMCSLRHPNVLLFMGSCEEPMALITEYMANGSLRDLLIERQVNLKFAVKLRMLADAARGMVYLHEAGLLHGDLKTANLLLDQNMVLKVADFGLSLLKNRAAGTEQLGTYLYMAPEVYRVCGPYVPASDVFSFAIIMWETFYACPPYEDVVVGEGIEAEELARRVADGELRLSFGEDCSVPFAVLTKACWDHISERRPSFSQVLVNLDNIAKSMAAGDEAFLARRSKSNGALLGAGDDGQADGTGLRLQTKCECKVFECGGSNLGPLLSADFVPCFVSIEEGDFSISPVDSSQDCKIVDDEVLRISLSSLVGPLSACGSDAFTMSLVVLNKYFITVKFDNVVDTMSWYEALQRTLGR* # ORIGINAL: g3485.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 38843 57272 . - . ID=g3485;Name=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 38843 57272 . - . ID=g3485.t1;Parent=g3485;Name=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 57188 57272 . - . ID=g3485.t1.exon1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 57188 57272 . - 0 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 55148 57085 . - . ID=g3485.t1.exon2;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 55148 57085 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 54007 55027 . - . ID=g3485.t1.exon3;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 54007 55027 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 52694 53887 . - . ID=g3485.t1.exon4;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 52694 53887 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 52124 52574 . - . ID=g3485.t1.exon5;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 52124 52574 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 51203 51936 . - . ID=g3485.t1.exon6;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 51203 51936 . - 0 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 51011 51108 . - . ID=g3485.t1.exon7;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 51011 51108 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 50013 50900 . - . ID=g3485.t1.exon8;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 50013 50900 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 49600 49834 . - . ID=g3485.t1.exon9;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 49600 49834 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 49371 49462 . - . ID=g3485.t1.exon10;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 49371 49462 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 48465 49244 . - . ID=g3485.t1.exon11;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 48465 49244 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 46983 48342 . - . ID=g3485.t1.exon12;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 46983 48342 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 45900 46882 . - . ID=g3485.t1.exon13;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 45900 46882 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 45440 45715 . - . ID=g3485.t1.exon14;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 45440 45715 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 45007 45270 . - . ID=g3485.t1.exon15;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 45007 45270 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 44539 44811 . - . ID=g3485.t1.exon16;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 44539 44811 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 44122 44388 . - . ID=g3485.t1.exon17;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 44122 44388 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 43693 43956 . - . ID=g3485.t1.exon18;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 43693 43956 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 42951 43550 . - . ID=g3485.t1.exon19;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 42951 43550 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 40027 42753 . - . ID=g3485.t1.exon20;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 40027 42753 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 39767 39836 . - . ID=g3485.t1.exon21;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 39767 39836 . - 2 ID=cds.g3485.t1;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 38843 39650 . - . ID=g3485.t1.exon22;Parent=g3485.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 38843 39650 . - 1 ID=cds.g3485.t1;Parent=g3485.t1 #PROT g3485.t1 g3485 MERQHRTRRLVFSATLLIGLLLVSFTSAAPCPASGDLTIASGQSCTLNTTGSPYSFGTLLIQGTLFIDAKLSDGTFASVEIRAVQLSVESGGSISATGLGYDVSCGLDRRSVQSTWLGAGHGGFGSTGGQDASIANGAPGQPYGNVFKPVAAGCGRGNANDRRTACAGTGGGAVYLNVSGSARIDGDVSADALSVDAVLCSGGGGAGGSVWIEAAALSGKGIISANGGDSGFNGGGGAGGRIAVFYGVNSFSGTIRAYGGITRSTDSTKWYAAAAGTVYLWNTATPKETGVLIVDNNNRGAGAFGALGVYLPSFAGTVPLGTSFTWKFSSVQVRNGSHLVVPKQNIITVSPTQFDASAGSAIHVLGIVDLYTPNFWPFGMSMYAMQQSTVNNYGDLYTRGSAYFLGSVIAATITACGPYLEHRGQIYGLNGGLTVCNNSRVLLAGGSAVTEVSFSRRRATPVGSFTTYRIEVLAGGRLTLQNGLGTPSAVTGYVSTIAVETMTVENGAIVDADGQGYFSMGEGSNGFKDTPICGASHGGYGSQEAQAGRSQRTVALPHGDPFRPSSFGSGGNPSASLSPLCNSAGGGVIRLIVSDSIRIDGVISANGLGGDFNSCPVAGGSGGSIHISAARISGGGVVRCDGGSGTYYGGAGGGGRVSLNADIATDFVGTLRARGGTGVGKSLAGGPGTVFLSADGNSRLIIDNDNLTAGTIDSFLTGIPLAAPAGGAFEHTYDTLILRHGGSLMIPPGYNVSLLSSRAVSDGSGILVDGVLDVDGDAWPAPLTVTVLSSGTMNVASGTGVLNLTGTVSNYGQITNAGQLTLCAAFNNYGALPDTSNITVCPSTTVFLHGFAGNLGNLSFVFESISLMPWSLVTISNGITPQAQYGGVVSLLVDRLSIAPHARMSLNQQGYFVGGPGAAGKLASFQQGPSHGGFGSQDWANNRDNSPPGAIYGDAYGPTGLGTGGSSSNDLRDICNAAGGGALKLTVTTSFKHQGLLSANGGTADSNTCVTQGGSGGSLWIDVGALTGNGTISANGGGATYYGGGGGGGRVALYYSSIAGFTGAVTAYGGTGSFGSLSNAAGAGTVFTVNKSDKRGLGVLIVDNNKLTPAPFVWLDPIAKASTPLPLSTVRYASLVVRNSGQALVQARDTYSIDDIASTYDGNSAVFVQGTATLNGDNWPSNMTTYVFKSGILRTVLSSLMTTAPLVNYGSIQTAADMSLCSSFKHYGTMPDCKTLSFCGGVTAFLDGYAGNVANLTYAFDSIALLPYALVTISNGLTLQAPYGGYVTLTVDTMSIGPGARLSLNQQGYFVGGPGAAGKLASFQQGPSHGGFGSQDWANNRDNSPPGAIYGDAYGPTGLGTGGSSSNDLRDICNAAGGGALKLTVTTSFKHQGLLSANGGTADSNTCVTQGGSGGSLWIDVGALTGNGTFSANGGGATYYGGGGGGGRVALYYSSIAGFTGAVTAYGGTGSFGSLSNAAGAGTVFMLDKSDRRGLGVLIVDNNKLTPAPFVWIDPIAKASTPLPLSTVRYASLVVRNSGQALVQARDTYSIDDIASTYDGNSAGTATLNGDNWPSNMTTYVVRQGLMQATGGLLKVVAPLFNYGSIRCGSRLSVCASLDNRGTLTTCDNVDVCNGTRAFFDGRFGNQNIPFQFAFGELFVGSNGEMVFGNGDALAGNLTAVNITAASIRVDAKGLLGVHGQGYIKGGPNFSPLTVNNPLPGAAHGGYGGVYTLSALYTGRLQAPYGDAYRPTTPGSGGILAVGAIAASCMVGGGGALRLVVTDLRIDGTLSADGAALDFNSCIAAGGSGGSLWIEAQTFSGNGVVSSRGSAGTYYGSSGAGGRIAVYFQSMSFSGNITAAGAVYTGRAVPNANGAAGTIYLNGIANGESLDRIVIDSWGIETGPLVASTPSLFSSTVVQGLRSDPLRDVVLRRLGSLYVPSGILWDTDATPISTPDHSGFVYVDGRLVMNGTWPTGLDMFVLRNGSLSVTSGALQIDSDGRLFGAGKINGTLDMRICSPSSLAQLNGTVELGNVTVCNGGSVYIDGRSGNVAPFLFQLENIRVQNGSLQFGNGISGLTSTVGALGKNVVVHAQSIVVSTDGSINVDRQGWPFFGPGASVTVPGKGFQSGGAGHGGFGSSDDFGASSTARAGSPYGDAYQPTTLGSGGLNPADVRDICLAYGGGALKLVADSAVIDGVISADAAVTDINCQSAAGSGGSIWIDANKLNGTGTVRSNGGSATYYGGAGAGGRIAVYCDQCSFGGRLQAPGGAGYVSRQPGYVGGPGTVFFLDRSVPEDRGTLFVNNSARPLATIPSVSSYFYPAAYAPDPSRPSRIKLSGVGHLYIGPLDVLNVTAVDFSESEPTSTVFVAGKALVNIRDWPKALSMAVVGSIEGSGPLQVNGRLWLYGSVNGVTDLEVCADTDLIGRLPLMRTLTLCPFVKTFLDGNATTGGNFSLDLDSIVLRRNSTLTIGCGIKTAGKIEGNGLSITALSVLLATGSRVSSDGQGYYMAGPGSGRSRNGEFSIGGSSHGGYGAANVASPLSYPGTPNGDAFSPTSLGSGGLHYYNSLCVGRGGGAIKISAVTVELNGTISADGTPTPSDCYYGSGSAGGSVWIDTVTLSGNGYITAHGGDSYWYSSAGSGGRIAVYYMSMEAFSGSALAYGGRNMQVGPPITTGGPGTVYLHDKPASAGQLLIDGGNRPVTDISAAVAPRVVTCAVVIGSSNVASSIVLRNKGNLLIWNANITFPGVALNSDGSGTVFLDGGRMVVNSPTAWPSAPIVLLPRGILAAPSGSLTVTAPFASLGTVAGLASLVIQAQFESRGLLGSIQNVWVSNATATFEGRNGTEGAFSFAFTSLRATDRARITFVNGFSSRDPNPQPIALTTSYMEVGVNCSVNVDGQGYQVGGPGAPKATSQLYAMAGSSHGGYGGIYYYPGGQITIIPGLPYGNYKAPATFGSGVGRDVVGYNCNIWGGGAIRINVTGECRVDGTVSANAFDRNPSCADVGAQGAASGGSVSLDCASLAGGGTISANGGVGDVYSGGGSGGRVAVVAGSFSGFKGSILARGSRSGSDMNTRHGSPGTVYTQLAGNVSSGMLTVDNGGLARQEQDLGGNSAIPFATACADVFLDSTAIPDGILSSQVMLRGNGALCVPATKSLSQSTSSSFQSDGTGAFYIGGSVTYNFPLESAPYMLVILKNGTLFGPGILTFRGRIVLSGVIRGIDSLMTCGSLVDTSKIYSGSIATCNQCLFDNGGCSGLASCVNATSQVTCACSQPYVRLFGGFGPDGCTAYPPTPSPLTVASIRQRTASIAWKPVSESLSPITRYEIVLNSTSVANFSSMASTLSFDALDLVPRRLYVATLRAWTLAGFTASDSVLFKTLPDVPLPATVVRDLTVSKNNVTVAWLTLDDGNVDSFEIFANDISVGNVTGTERAFVVGNLLPVTSYFFYVRSWNSAGSADSNLIYATTAPGEPLRPPTPTASFVTSGAVSVLWPAVTDPYGLPIRYALLVNGSVFMIVSGTTNFQRVIEGLRPYTTYAISLRAITDGGSTDGDALIVTTLAGFPPPVLPIIVSVNATSADVTWEAGNESNGPIVLFEVLLNSNLVLSVRPGQERRAFFTDLVPNAVYTVTIRTHTSAGSSDGSSLLFTLAAPPSFVPPPEIVDVLSNSIIVLVTPADESTGRITAYEIVVNGEAVTQLVGPSTVVVGALRPNTTYIVAVRAFTSGGSTLSAAVSVTTLAAVIATPSVLVTEESGSIPDSTSIASSGFAKGTAAMSTISNLAKPSSTNESAPESSSAVAVPEVSAVSSVSSASASSPNPQSAVTTSEPASNSPAPSASPTETTSTPTATSRPVVLAAPTVDLRTATTLTVIWLPLVPGTFYTVLLDGIPAGNATAITVGEPLAVTLSGLTPGTQYSISLTATVDRLVLMSAVTTASTLGGVPSTAPLASVASLSEAAIGIRWEPSPAIPGVRFLLIDVEVNGTLAGQFANEDGAATISDLSPFSVYAIVLRINTDYGSVESLPLVVRTLAGLPEKPLPPTVGRTSARTVSVAWALVPYSNGPIVAYQLIVNDTVVMELPPTVNNATLGSAHGIRPDTTYAFRLVLVSSSGKSAIGSIVYARTAAPLAVASWSVDLNAGNVTIRVKGALDGSSFNANALAFTGSPKSPGVAFNGTASVSASGSLVTLTPTRRVLGVIKTLFAGNSGTVRMLVSPSAAVDLDGVAVVDRSAYEGGVIPTSVNLDVSPPHILTVHLDAASWTVTVRFDEPVWLGSVDMSRVILRPPGGLQLPSAFPPVTTGAVSAAGGADDILANVSGIGVVSNVVSFQLNTDAVVALKYLDPQSLTTAATSLVMFSNGFARDLTDNVMRDPTDDVAFTFVPGPPPRNCSRERIVFDSERIIEWQETEPLATAVRPCGKGYFSSATRACDPLGSWRSADLSSCVHISILIASINTTLYSGRDLGGAATALSNTTGGGNADVFTTTQVDSTADVVTVLVNVGGNSNYTDWIPPTIGSISDFVGVSPDPGSGSKPVSPSAGEQLTLAVESLGFGLGNATNVPVRVAKPNLVVEGSVIDATAYPTAAVSFSDSSFGALSTFTLPVSALSRAANASQARVYFAVYRIGTLFLGNNATSSNSLVASSVISCGIDTNDTLRSLSEPVVFNVMVGPARPVPVGKKGVFVCSYWSYSARSWLRDGCASVGTIEANSTASCSCDHLTNFAVLFQIDDDNGPTGAAAAALEAITYIGCALSMAGCLITFITFAVFSRLRTSAMRLMMNLLVALFAMNLTFIAGINSGNAGGCRAAAMLLQFFILAAFVWMFLMAMNIFRGIVLLDKSGSSEHYLAHVAIGWGVPAAIVFLTMAIDFDAWGSDNGRCWFDNKSALYGAFYAPVLAIILFNTIVFIMIARTLTKHSAEMSKERQRERLGHARILAGIFLLTGASWVFGILAIGDAKTALQYLFTITNSFQGAFIFLVFCLTKRVRQEYAAFVSEHSSLAIFSGIFKTSATSSAGTSATGSTARTSSGASSAPGTYSKGRSDTVGGTVSSLASGGSNPRISALSASGIRFSGGSFGSTSSLPNSPPVTLRVARLQSEDFAGSRERIMLSQPQSLPQSQLRHGSAAELASLFEMSLDDFDKIEESRV* # ORIGINAL: g3477.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 16448 18425 . - . ID=g3477;Name=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 16448 18425 . - . ID=g3477.t1;Parent=g3477;Name=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 18362 18425 . - . ID=g3477.t1.exon1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 18362 18425 . - 0 ID=cds.g3477.t1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 17877 18199 . - . ID=g3477.t1.exon2;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 17877 18199 . - 2 ID=cds.g3477.t1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 17638 17769 . - . ID=g3477.t1.exon3;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 17638 17769 . - 0 ID=cds.g3477.t1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 17298 17450 . - . ID=g3477.t1.exon4;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 17298 17450 . - 0 ID=cds.g3477.t1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 17012 17196 . - . ID=g3477.t1.exon5;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 17012 17196 . - 0 ID=cds.g3477.t1;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 16448 16865 . - . ID=g3477.t1.exon6;Parent=g3477.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 16448 16865 . - 1 ID=cds.g3477.t1;Parent=g3477.t1 #PROT g3477.t1 g3477 MALVRGDKGWRVPVTIISGFLGSGKTTLLRHLLTNKAGWNVALIVNDMAEINIDARLIAKTTPEDEQRAGAIELTNGCMCCGLKEDLLIEIHKIAQSNKYDYLVIEGSGIAEPLPVAEGIASFDIGRGKVLADVVSLDTLVTVVDARNFLRDYQTSKDSLGDRPELLKEMGTSVSMISHNVVDLLVEQIECCNVIVVNKTDLVTPEELERLSAILSSLNPTAEQIQAQFSNVDPHRIVGTGLFDFDAAEEMPGWLRILRGNFIAKAKQCGLSSFVYRARRPFNAQRLHAFMKKAEARPPSFAFNAVVRSKGFVWLAPVNDLSCEWGHAGCLFRLDGGQPWFAAIPRDDWPGDESTHAEIAADFDADESVGDRRQEVVIIGVAMDQEAVEHELSSCLLTDDEYALGPDAWAQMPNPFGADGPSSE* # ORIGINAL: g3475.t1 original gene structure, not modified by PASA NODE_10_length_75532_cov_43.7532 AUGUSTUS gene 9541 10850 . - . ID=g3475;Name=g3475.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS mRNA 9541 10850 . - . ID=g3475.t1;Parent=g3475;Name=g3475.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 10457 10850 . - . ID=g3475.t1.exon1;Parent=g3475.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 10457 10850 . - 0 ID=cds.g3475.t1;Parent=g3475.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS exon 9541 10280 . - . ID=g3475.t1.exon2;Parent=g3475.t1 NODE_10_length_75532_cov_43.7532 AUGUSTUS CDS 9541 10280 . - 2 ID=cds.g3475.t1;Parent=g3475.t1 #PROT g3475.t1 g3475 MTNLEAPLGALYISPDITDFTCSLLALRATLATSVQFHGPRSVVDECKRVRADYGAIGIEERIISTVLPLFERVWKAMNTLASNSPLYLPPIYSGEEDLHALLSTLTLQFILRDGELTRHDMGHPIIGGVKGIFGALSKNMTPSVYDTVEGAMGDICLGLIVDEVQALFSDNSSVTARVDTVKGLHAFARGVPGAYLVMTGSSAMLRSCLYQYKRDGRFARYPDFNGHLCQFYYVAALRTRESLAHYLGRRYGGQWEQGTVDRILHATGGIGRAVHAYVMSKGAMDPKIFYGRAKLDEAYNDASNTFSLAVQFMYKKGGLALEAKLSSGTTQCLCTEDVCVALHELTSFLTKACPGKNVMRLVEEWIDNGAALSNKL* # PASA_UPDATE: g3487.t1, single gene model update, valid-1, status:[pasa:asmbl_378,status:3], valid-1 NODE_10_length_75532_cov_43.7532 . gene 61490 63992 . + . ID=g3487;Name=g3487.t1 NODE_10_length_75532_cov_43.7532 . mRNA 61490 63992 . + . ID=g3487.t1;Parent=g3487;Name=g3487.t1 NODE_10_length_75532_cov_43.7532 . five_prime_UTR 61490 61588 . + . ID=g3487.t1.utr5p1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 61490 61660 . + . ID=g3487.t1.exon1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 61589 61660 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 61827 61943 . + . ID=g3487.t1.exon2;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 61827 61943 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 62052 62226 . + . ID=g3487.t1.exon3;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 62052 62226 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 62329 62387 . + . ID=g3487.t1.exon4;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 62329 62387 . + 2 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 62483 62672 . + . ID=g3487.t1.exon5;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 62483 62672 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 62830 62922 . + . ID=g3487.t1.exon6;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 62830 62922 . + 2 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 63115 63213 . + . ID=g3487.t1.exon7;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 63115 63213 . + 2 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 63345 63472 . + . ID=g3487.t1.exon8;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 63345 63472 . + 2 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 63672 63752 . + . ID=g3487.t1.exon9;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 63672 63752 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . exon 63845 63992 . + . ID=g3487.t1.exon10;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . CDS 63845 63940 . + 0 ID=cds.g3487.t1;Parent=g3487.t1 NODE_10_length_75532_cov_43.7532 . three_prime_UTR 63941 63992 . + . ID=g3487.t1.utr3p1;Parent=g3487.t1 #PROT g3487.t1 g3487 MSLRFASSLARPYARAILATTVRNGGVLPRVAGSGHRAALVTPASLQVAEYHAGRRHKKPINTIINFVPQQEAWVIERFGKFHRVLEPGVNILLPIIDDIKYVHSLKELALDIPSQSAITQDNVTLHLDGVLYLKVEDPKQASYGVEDPEYAVKQLAQTTMRSEIGKMRLDDVFRERASLNLHIVDAINSAAAVWGIRCLRYEIRDIQLPDKVVESMQTQVAAERKKRAAILESEGARESAVNIAEGNKTAQILASEARKEEQVNIANGEAQAIIARAEATAQSIERIAKAIASNGGKDAVSMTVAEQYVEAFSKLAKTGTTILLPAHTNDAGSMVAQAMSIFDTVRRQSPHAEGKVADAVGKIADKSH* # ORIGINAL: g14500.t1 original gene structure, not modified by PASA NODE_731_length_18400_cov_40.2827 AUGUSTUS gene 56 1869 . + . ID=g14500;Name=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS mRNA 56 1869 . + . ID=g14500.t1;Parent=g14500;Name=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 56 80 . + . ID=g14500.t1.exon1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 56 80 . + 1 ID=cds.g14500.t1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 285 382 . + . ID=g14500.t1.exon2;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 285 382 . + 0 ID=cds.g14500.t1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 682 721 . + . ID=g14500.t1.exon3;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 682 721 . + 1 ID=cds.g14500.t1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 969 1050 . + . ID=g14500.t1.exon4;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 969 1050 . + 0 ID=cds.g14500.t1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 1367 1430 . + . ID=g14500.t1.exon5;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 1367 1430 . + 2 ID=cds.g14500.t1;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS exon 1614 1869 . + . ID=g14500.t1.exon6;Parent=g14500.t1 NODE_731_length_18400_cov_40.2827 AUGUSTUS CDS 1614 1869 . + 1 ID=cds.g14500.t1;Parent=g14500.t1 #PROT g14500.t1 g14500 DLKTPNLLIDNNFVVKVSDFGLAQFKNNRVTNNDTVTGSMRAHVYAFGIILWEMAAEEIPYFSDGKDAFSIGFILSEIVANDARPTMPPNTSTDYADLAMKCWSGHPSDRPMFSAILESLRQILSRSTGVPVGMGTPLRSNSVTGTQSPVDTIGAEVQVTSTRATGRRLSIQSVGRDAADVTVLEAD* # PASA_UPDATE: g14502.t1, single gene model update, valid-1, status:[pasa:asmbl_9099,status:3], valid-1 NODE_731_length_18400_cov_40.2827 . gene 12898 14644 . - . ID=g14502;Name=g14502.t1 NODE_731_length_18400_cov_40.2827 . mRNA 12898 14644 . - . ID=g14502.t1;Parent=g14502;Name=g14502.t1 NODE_731_length_18400_cov_40.2827 . five_prime_UTR 14621 14644 . - . ID=g14502.t1.utr5p1;Parent=g14502.t1 NODE_731_length_18400_cov_40.2827 . exon 13983 14644 . - . ID=g14502.t1.exon1;Parent=g14502.t1 NODE_731_length_18400_cov_40.2827 . CDS 13983 14620 . - 0 ID=cds.g14502.t1;Parent=g14502.t1 NODE_731_length_18400_cov_40.2827 . exon 12898 13734 . - . ID=g14502.t1.exon2;Parent=g14502.t1 NODE_731_length_18400_cov_40.2827 . CDS 12933 13734 . - 1 ID=cds.g14502.t1;Parent=g14502.t1 NODE_731_length_18400_cov_40.2827 . three_prime_UTR 12898 12932 . - . ID=g14502.t1.utr3p1;Parent=g14502.t1 #PROT g14502.t1 g14502 MGQYTPRWVLLRHIGRLVTMNDAGDEFADALVVMWDGVIVHVGRESDVSEGTKGGEWIKRALGEGLADVVEIVLDRHVVVPGLVNCHHHMYQTLTRCVAQDKELFGWLSSLYDVWGHLTPDHVRVSATVAMAELILSGCTTSTDHLYLFPNGCRVDDEIDAAKEIGIRFHPCRGAMSLGRSKGGLPPDHLVEDEGVILADMQRLIEKHHDPSRYSMLRIALAPCSPFSVTEDLMRNAAHLARQHGVRLHTHLAENDNDVDYSLRVLGNIPGEYAKRVGWVGDDVWFAHCVKLSGAECDLFASTGTGVCHCPSSNLRLASGIAPVVDMIKKGVPVGLGVDGSASNDSSNMLAEARLAMLLQRANGNPGAMTAREALRLATVGGARLLGRDGEIGKIVEGYAADIAAFRTDSIGMAGAQLDVAAAVVFCSPGGADVVVIHGKIVVRDGHLLTIDVPATVKRHNELAKDLWNSAAAAKEGTV* # PASA_UPDATE: g14501.t1, single gene model update, valid-1, status:[pasa:asmbl_9098,status:12], valid-1 NODE_731_length_18400_cov_40.2827 . gene 2135 12314 . - . ID=g14501;Name=g14501.t1 NODE_731_length_18400_cov_40.2827 . mRNA 2135 12314 . - . ID=g14501.t1;Parent=g14501;Name=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 11076 12314 . - . ID=g14501.t1.exon1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 11076 12314 . - 0 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 10548 10811 . - . ID=g14501.t1.exon2;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 10548 10811 . - 0 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 6251 10400 . - . ID=g14501.t1.exon3;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 6251 10400 . - 0 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 6017 6097 . - . ID=g14501.t1.exon4;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 6017 6097 . - 2 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 3801 5717 . - . ID=g14501.t1.exon5;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 3801 5717 . - 2 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 3297 3584 . - . ID=g14501.t1.exon6;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 3297 3584 . - 2 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . exon 2135 3143 . - . ID=g14501.t1.exon7;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . CDS 2467 3143 . - 2 ID=cds.g14501.t1;Parent=g14501.t1 NODE_731_length_18400_cov_40.2827 . three_prime_UTR 2135 2466 . - . ID=g14501.t1.utr3p1;Parent=g14501.t1 #PROT g14501.t1 g14501 MRFGAVGQRSIQQHGLARASFIAFAIVAHICTASAGIVERDAKLFTYPEEGKSSGLHGVTASFSIDLATCVDGKVSGVGSFKFPTVSDNEVQTSVDVDCAILSAGGNGVRWTMRKSGFAPTREIAFPGDAKMALKDCNVVFVVNVADGGVDNSTVTLECTHEEIAVTARYPAIADPVYGNVIYEASKGAGEVQLGKLISRFALFGISLPGGDIINSIVGEAMNTAVAEFSATINSKAPSILAKATVAVYGKSATAYLYFGNFDSAKGPVTGAAIIIKIAVGGVNVPTIFKPLFDMKLNDAFVAVTYNDIRLVIDGQELGFDSGVSLIARLSPEDSSVSTLKSQLGGSEFSKQLSVQQLQIQGIIHSLTNVKFVADLTGNFPIANGVDVKKLSFEVEVNAEPPSITFGFGAVLEVVFGKGTDDQKVVTFEGKVSVGAKPEGITLAFEFSANSAEPWKNPLGISKKVSVLFPLVLKMGVLITAAPPFLVPASFAVAGGLQIGEDPEKASKAQLALSADLTDPSKNVIKFDAKEIKFSALVSNVAGCDDCLGFFAQVMDAYFSFDNISLSFNPTGNAVNIGTSSALIIVQPGLFIDIVNMKIYFVFKIRHAVLKASIGGIEALLDMEPIDFAGIMTIRKYTGPALARRSIVDFVDPSIMGTGDIISFADAVGGVAASGRALSKGVASAVAADMEPDNVGPAHLHDLPRASPRVSSRRARRDEDLPPYAVVILQSTPSVYLRFESTGNGTALINSGIGNPNAVTPTGKLAVDEGYVGNGLIVAPGTTVDFELRSVSDGKASFSEFSVESWVYFSADNAAIKETFVVYESLPNATAPARADRLKVWVTQRASVAVELSETGDFIETRGLTIDTGDWVHIVAVVTLTSVKIYINGFVSASLDRFAVVPLIGGSARLGPYWGEGEHPDPVIVDEYAAYSHALAHEEVWAHFQAFDGADAYSWAVARYMPGVYERFDSVDTAPSAGASDLGGGARQQNTDFDDGIIGDGLVLSTAALSAYTIPETFVTGGGATVEMWVKASQNSTVTGDAPRVLLQGGDSSYFTGVKITVAVSSTGTLMARIGELPLFDFGGRTVGTVWTHIAVTVTDDTVTGYVNGANVGDFKWTTANFLLGPFSAGCAQATQCTGGVFEGIIDEVALYPSTLSDEAIWAHFALLSPSHEAQLSTAVVIDSPDIYLRFEDVGSDVLHSDGSEDYGVAAGPSADIVVLGVLGTSGVVTSTDAIVFTATSDPEADAKNSEAVTVEFWALGFSVALLTDSTISHKFIEGNNYALAFNKGGVEISVGGAVRGLVTASEPVVRRGGDGAGYSQVAVVLTLTDATLIVDGDVVGQASIALPMGSKFDSGVVRMYAGVGVEYMMAIDEFALYPQALTAGRLYNHYVRALFGEKSRGVAISSMGPLVFYRFENTRVLRSYGSVDISDVVLDVDAPGVSVGAPSSMNMPDDGTGTDASQVGHFTGHSFSVNRNGKAPVSFGRFEDGLSFDVIFRLSDIPCSPGHMTVFASDYGNGWTNVGAVSLQVMYAQKKAWLRATAVGGGQVDMFQVQKDTVYELTIIFESDGVSVYGFVPVIGITLVHRALWEPSADPFSFSIDGLRIGAAPRGQDVHDLGLYGEISLFAVYATALTEDDLVPRNWLGATVEADLGDDGSDNTERRRREMYALREGSVAYYERSYTPDEWRVDLSRQRERRADGTTPADDGPQLSMKFSAGERYLKANGAVSLLKTIDARVVLEIRDTELYGEAGFRFGSLFSLTFLLRSKGFPGGDGFMFSLTGTFESNVWEELKKAGVAVAQQFAESATQQLDKAKASIGDAKAKLEEANQSVERERQRINGKFSDAQNSIRDKRNSVANLRASCDDYNDNCKWYKPWNCIAYAGCWIGLKIAEAVLSAAEAVVGAVAFVADAAFQLAEAAVSAAQSTLTATQKVLDGCTVVVNALPGLLEGLLSFLGKVFNIRKAAFETTLTNTADTIGYDIDATILGVDINLKGQITLSFEGIKNWILDQVREAIKKIGGGGSRRSIDGGYHVTAEMLHAQGVVDMTRFPHLGGRHVRTIGKTIETAVVCVAGMSVFDGSKQSFVGEIPGCLFAIDALKSLYLTGNALSGVIPEFDNKAHNIEYLGLADNSLTGPIPATISKATKLRWLDVSGNVAITGTLTPLETLAYLEYVDISHTAIPFSVDNVVRSLGRLPRLRYYDVRGVVPPASTAVSATKPDAIEVTIVAELPQSTFCSACDLAVKQAGTCASNACSSGNLALEKAAAYIKRKLTSVAGAKSATVTVTGTFALGDEYTVIKAAVGGIPDADTTASMQLLSDMPSAQDSNGGLRVYYQEARPKCAAGLFGKDCSFFCPYSWQRYSNDAASVSQKMVDASGFEASVRIVLDNLSPRCFIPDTVACGKNVTVAVQTAVDVCINYIEGTAAVGRCADAIDAATQAATDFGVSPTCASEALGEFAKRVDADGAASPCAIAEFEAVLSTSDGTRVGSAVVAFERASGSIKFIVEADATADFTALTESDEDDVCGVWRYGGSDDDGDDVGSIEIMEGSAGFPGETLLSWTAAQSGLAIGFGSKGGVCVTGQWADADLEDWDLRSDIRATKSAASVFQYQFVVKTRGNPDGAFLGTLKWARCSTAVPSCKSSCVASRACANANGACGGKARCEEVFVKATDTVSATTTAQCNCLNGDNPCTSAGVLAPLPNGNVIACGPSVKSRCVVSEDGGRRWIPHSPRVDGNRATILGGIARPDGAPDLLYRSAAPIGRERPGASESDRCLVLAEKGGDNERLVPPNFADKYVAPNHFSPSVRPSLDGAQSSFPTEDIPVFEAGGALKGTVGVSSRGIFYRDDQSNWRMRGAWMCGADEGGKCSGPK* # PASA_UPDATE: g14503.t1, single gene model update, valid-1, status:[pasa:asmbl_9097,status:12], valid-1 NODE_731_length_18400_cov_40.2827 . gene 15236 18094 . + . ID=g14503;Name=g14503.t1 NODE_731_length_18400_cov_40.2827 . mRNA 15236 18094 . + . ID=g14503.t1;Parent=g14503;Name=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 15236 15484 . + . ID=g14503.t1.exon1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 15236 15484 . + 0 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 15751 15781 . + . ID=g14503.t1.exon2;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 15751 15781 . + 0 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 16064 16217 . + . ID=g14503.t1.exon3;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 16064 16217 . + 2 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 16630 16731 . + . ID=g14503.t1.exon4;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 16630 16731 . + 1 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 17081 17187 . + . ID=g14503.t1.exon5;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 17081 17187 . + 1 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 17453 17607 . + . ID=g14503.t1.exon6;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 17453 17607 . + 2 ID=cds.g14503.t1;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . exon 17915 18094 . + . ID=g14503.t1.exon7;Parent=g14503.t1 NODE_731_length_18400_cov_40.2827 . CDS 17915 18094 . + 0 ID=cds.g14503.t1;Parent=g14503.t1 #PROT g14503.t1 g14503 MKRSHRLGCDDLSGTAMSLKLMLFLSIVSLSVHWMHFATAQVWPDTDNPFVSLALPLANNTVLLGGLHNTPTTGGQEREAHMKLAVDMLNNKTDGWFDDLLPNTTIVLVANSDNNSDRRSALNSAVDHMTKGVFAVIGATSSSISTAVQLLYQVGNVPQISFSATAVELSSKTTYPYFIPVIATCVGHKNQVTYAGLIASGFFMFVFLAWLCIQIIAVEVKSSGARSFGKVLTELITVHFFGVALVSASTAAALVLMLQLRNILEGAAVNETLFESQNAYSNRTFLAMDVNEEGVPVVKIRNPYNRGFKDNMLEYIGIIPAPWDK* # PASA_UPDATE: g8018.t1, single gene model update, valid-1, status:[pasa:asmbl_8257,status:3], valid-1 NODE_573_length_20979_cov_42.7913 . gene 5554 8062 . + . ID=g8018;Name=g8018.t1 NODE_573_length_20979_cov_42.7913 . mRNA 5554 8062 . + . ID=g8018.t1;Parent=g8018;Name=g8018.t1 NODE_573_length_20979_cov_42.7913 . five_prime_UTR 5554 5604 . + . ID=g8018.t1.utr5p1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 5554 5737 . + . ID=g8018.t1.exon1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 5605 5737 . + 0 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 5908 6058 . + . ID=g8018.t1.exon2;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 5908 6058 . + 2 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 6209 6297 . + . ID=g8018.t1.exon3;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 6209 6297 . + 1 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 6432 6756 . + . ID=g8018.t1.exon4;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 6432 6756 . + 2 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 6930 7077 . + . ID=g8018.t1.exon5;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 6930 7077 . + 1 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . exon 7319 8062 . + . ID=g8018.t1.exon6;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . CDS 7319 7822 . + 0 ID=cds.g8018.t1;Parent=g8018.t1 NODE_573_length_20979_cov_42.7913 . three_prime_UTR 7823 8062 . + . ID=g8018.t1.utr3p1;Parent=g8018.t1 #PROT g8018.t1 g8018 MRLVAASLLVAACLSAALAAPPTTLPRPTIQQLEWSGMGIGCLIHFNMQTYDPTLSLGNVPDISVFNPEKLDTDQWVQACRSFGGKYAVMVVKHNDGFALWPTKAYDAVGKQYSVQYSKFRDGKEDIFGNFINSCAKFGVRPGVYCSASENYLMGVTAGRVVNGTKEQQDAYNQVVLTMFTELWSNYGPLTEIWFDGGVLPVSEGGPDVQPLIEKLQPQAVIFNPPTPVNGIRWVGNELGVASDPNWATVDDSQQCAWGATNGDPNGGIWCPTECDTTLMSQDQWFWNPNGNAPLRPIDELRTVFLSTVGHGCNLLMDISPDTDGLVPEDHTTLYAQLGQYIDKFGRSATIASTSGAGKEVVLRIHPTATVGAVLIREDISLGQRIRSYVIEGETQPNQWTQIANGTAIGSSRIHIIDAPVALAAVRLRVDDSVDIPFISELAVLPKPE* # ORIGINAL: g8016.t1 original gene structure, not modified by PASA NODE_573_length_20979_cov_42.7913 AUGUSTUS gene 99 1310 . + . ID=g8016;Name=g8016.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS mRNA 99 1310 . + . ID=g8016.t1;Parent=g8016;Name=g8016.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 99 478 . + . ID=g8016.t1.exon1;Parent=g8016.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 99 478 . + 0 ID=cds.g8016.t1;Parent=g8016.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 851 1310 . + . ID=g8016.t1.exon2;Parent=g8016.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 851 1310 . + 1 ID=cds.g8016.t1;Parent=g8016.t1 #PROT g8016.t1 g8016 QVRATLALPRMWLLAGLSFFVILPLYCMAFYLPAIINDFGFDPITANLVSTIPYAFATVAMYANAAHADRTGQHAKHVVLANCIAGIGFLVLAASFATGWGGMAVRLTVASVAAIGTWSAVPVVLACGLVGPSAIGFFRQTTGGHAVGMFMLVGSLIGASTCATLLRRSIEKHEAQCARDMGMRDAIEDDTLALLESASIPPRESLRSTEQLGDHGLHDHGDDNDDIDADGVGGAIKGPSLNSMVMKVLKRGSADGRRGAYARLADGDGAGGADPDADD* # ORIGINAL: g8019.t1 original gene structure, not modified by PASA NODE_573_length_20979_cov_42.7913 AUGUSTUS gene 8709 15018 . + . ID=g8019;Name=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS mRNA 8709 15018 . + . ID=g8019.t1;Parent=g8019;Name=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 8709 8958 . + . ID=g8019.t1.exon1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 8709 8958 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 9162 9295 . + . ID=g8019.t1.exon2;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 9162 9295 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 9450 9573 . + . ID=g8019.t1.exon3;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 9450 9573 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 9695 9761 . + . ID=g8019.t1.exon4;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 9695 9761 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 9875 9996 . + . ID=g8019.t1.exon5;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 9875 9996 . + 1 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 10080 10132 . + . ID=g8019.t1.exon6;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 10080 10132 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 10307 10358 . + . ID=g8019.t1.exon7;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 10307 10358 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 10462 10500 . + . ID=g8019.t1.exon8;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 10462 10500 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 10640 10749 . + . ID=g8019.t1.exon9;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 10640 10749 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 10857 10922 . + . ID=g8019.t1.exon10;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 10857 10922 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 11092 11346 . + . ID=g8019.t1.exon11;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 11092 11346 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 11446 11703 . + . ID=g8019.t1.exon12;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 11446 11703 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 11829 11841 . + . ID=g8019.t1.exon13;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 11829 11841 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 11993 12038 . + . ID=g8019.t1.exon14;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 11993 12038 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 12178 12305 . + . ID=g8019.t1.exon15;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 12178 12305 . + 1 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 12476 12618 . + . ID=g8019.t1.exon16;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 12476 12618 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 12846 13013 . + . ID=g8019.t1.exon17;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 12846 13013 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 13178 13250 . + . ID=g8019.t1.exon18;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 13178 13250 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 13372 13436 . + . ID=g8019.t1.exon19;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 13372 13436 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 13631 13701 . + . ID=g8019.t1.exon20;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 13631 13701 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 13848 13866 . + . ID=g8019.t1.exon21;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 13848 13866 . + 1 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 14031 14142 . + . ID=g8019.t1.exon22;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 14031 14142 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 14403 14563 . + . ID=g8019.t1.exon23;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 14403 14563 . + 2 ID=cds.g8019.t1;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 14926 15018 . + . ID=g8019.t1.exon24;Parent=g8019.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 14926 15018 . + 0 ID=cds.g8019.t1;Parent=g8019.t1 #PROT g8019.t1 g8019 MRQGERRNGARPWARFSSLDRGSVGGARSAPPSASASASVGQRIYKTPGARSGTQSRPNTAAARTPHTVATSTQGGSRSAVIVALQSPVLVLAMVSRHLLFAHLPRQFADNATYVKVMTKLEIYQPVEIIMPSTAFENGKMSKLYQLLSERFSGTNIVTVQRKYFNETKGLGYIRQLALKECSTLELELASKYFCCATAAALLKYIEYIQNTIFASNTLKITFRGSENTMMIDATTVSHLELVVNTRNPKANDTLFGTLNYTSTAIGARMLRSNILQPPNGFVRFGSALPHAILSLANPFVICYAANFKSTELMAREDDFFGLRELIGKFIDIDHLITMMIVMPKQETVKTAESAITNLIMLKHLVELVPQLCDGLRSCETSLLSAYRDTLASDPRFERLRELIATTISDDTHYQKGVLHMRAQKCFAVKPGINGLLDVARRTYTETIEDIYELVSQYATKYALGLKPGFSTTRGFFITMVAMDAPTELPSIFTQIVTNKKTISFTTPDLIKYNDRVQESLQEIYLMTGVVVKELMGSIRENIGCLYKLSECVAMIDMLLSFVHKCTISAEYVRPEFTGTLAIQAGRHPILERINADDVVPNDAYASDSCNFQIITGPNMSGKSTFLRQVALLQIMAQLGSFVPASYASFRLIDQLFSRIGSDDDMETNASTFMLEMRETAYIVQNANTNSLIIIDELGRGTNNQEGVGICLAVCEHLISIKALTFFATHFMELTELDTVYPNVENFHLELQRQGRDTAADVTRNGAATNEAIVFTHTLSKGKTWEESYGIRMAELAGFPQSVIADAEALAAKLNARQRRLFADDPSRRRRRAVFQLAARIMQAVQVSQLPEEQLRDYLRELKAQYIGDLTPI* # PASA_UPDATE: g8020.t1, single gene model update, valid-1, status:[pasa:asmbl_8259,status:12], valid-1 NODE_573_length_20979_cov_42.7913 . gene 15425 18781 . - . ID=g8020;Name=g8020.t1 NODE_573_length_20979_cov_42.7913 . mRNA 15425 18781 . - . ID=g8020.t1;Parent=g8020;Name=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 18462 18781 . - . ID=g8020.t1.exon1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 18462 18781 . - 0 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 18083 18204 . - . ID=g8020.t1.exon2;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 18083 18204 . - 1 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 17662 17813 . - . ID=g8020.t1.exon3;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 17662 17813 . - 2 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 17210 17408 . - . ID=g8020.t1.exon4;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 17210 17408 . - 0 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 16838 16920 . - . ID=g8020.t1.exon5;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 16838 16920 . - 2 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 16429 16520 . - . ID=g8020.t1.exon6;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 16429 16520 . - 0 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . exon 15425 16231 . - . ID=g8020.t1.exon7;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . CDS 15505 16231 . - 1 ID=cds.g8020.t1;Parent=g8020.t1 NODE_573_length_20979_cov_42.7913 . three_prime_UTR 15425 15504 . - . ID=g8020.t1.utr3p1;Parent=g8020.t1 #PROT g8020.t1 g8020 MASLPARETVLEPAPRHASGNANKPQHHLGNNCCSSSKPGKRSRAGTDGRAGEVDAPATVDGVTRVPLEGKNDLFCDGEVVMGPEKRLYRVALGLTVVGMAVYFATTSVYMWRNVSPAVPIVAGYLAALTFITFFRTAMSDPGILPREPPPEHDDPYAPSTVDSIVRGAEIKRKWCNTCHFYRPPRTVHCFECDNCVECYDHHCPWTSNCIGRRNYRYYFSYLGSLTAFILYAIGSCVAHVVLVAREDGASEIGAKAVPRYPPTPAIALWPVGGLFVFHCSLISIGKTTNERLTNRLRGVKNPYDRGAWSNLLNTICGVRYPRYVLRHEQSPPAASRDAVEMVPIPRTASTLTAVPMEEHRDKSRRFSLLSIVNGARRNTSRGHTASAARHNSGLTAGDSAGAADADNTQREGGRPLSTLSYASGGSSAPYPLASVSGGAIGRSSFSGRAALSPSGSVSGVAAEVSGAGASGASGASGVSRASGAVQTSAGSVGDVSHSESVSHLKGDVTIDVWGVTCEVRQGESDSDSEGGNGVRGVRGAHAHPKPAVRDIVAAIADEVSTTV* # ORIGINAL: g8021.t1 original gene structure, not modified by PASA NODE_573_length_20979_cov_42.7913 AUGUSTUS gene 19431 20729 . + . ID=g8021;Name=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS mRNA 19431 20729 . + . ID=g8021.t1;Parent=g8021;Name=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 19431 19454 . + . ID=g8021.t1.exon1;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 19431 19454 . + 0 ID=cds.g8021.t1;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 19565 19633 . + . ID=g8021.t1.exon2;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 19565 19633 . + 0 ID=cds.g8021.t1;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 19840 20469 . + . ID=g8021.t1.exon3;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 19840 20469 . + 0 ID=cds.g8021.t1;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 20643 20729 . + . ID=g8021.t1.exon4;Parent=g8021.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 20643 20729 . + 0 ID=cds.g8021.t1;Parent=g8021.t1 #PROT g8021.t1 g8021 MQSSLSAEDFDYNPFFRALTVKYGAVYKKIQLERLLVLIPHSESLANWKPSKAFVEAHVFRTSPYINNEYISAFDKSGKESAMTIDAGIVHWRSAVSLARTPASPRDAAVAHAQLRLSQPPIAVIAEETFYNDFSQQFRVLLISRPLIHTPTVTSAAVPPSAGSPLSGKKEMPGSILSPYSALRVSLEDHVRFLDAHVENETALEYLRGLISAFNQSYVVLPGYSGHAAAKIDSMCAQGVEALRKHNRGLAAIMNDSRVQVSVRMSVEW* # ORIGINAL: g8017.t1 original gene structure, not modified by PASA NODE_573_length_20979_cov_42.7913 AUGUSTUS gene 1875 4987 . - . ID=g8017;Name=g8017.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS mRNA 1875 4987 . - . ID=g8017.t1;Parent=g8017;Name=g8017.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 4811 4987 . - . ID=g8017.t1.exon1;Parent=g8017.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 4811 4987 . - 0 ID=cds.g8017.t1;Parent=g8017.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS exon 1875 4466 . - . ID=g8017.t1.exon2;Parent=g8017.t1 NODE_573_length_20979_cov_42.7913 AUGUSTUS CDS 1875 4466 . - 0 ID=cds.g8017.t1;Parent=g8017.t1 #PROT g8017.t1 g8017 MAFSFLSQGINAVLGPAAPPEMNAAETVERLCDRVSTATMLEDRRDAVRSLRSLAKEYKVEVGTRSMDVLVVVLQNDRSDAEITRFALETLISVMERADGGGRGQSAQQGGDLGVGFTEIFIKKAENVHLLLDLLEEHDFYVRYHTVQLLTVLLSNKSKELQECILTAQMGVSRLMDLLVDNREVVRNEGLLLLIQLTKENSQIQKIVTFENAFERLLEIIFDEGLGDGGIIIEDCIRLMHNLLRNSINQKYFRETSCVQKLVPFFKNLIPPPSDAAGATQPNGAAPGASASSASASVSPQVQWPPQKVSNVRLMLELVRLLVPPNGSDVKPDQKALAQHSILALLCDLGMTDRAPVTVRTEALNTVAEIVRGHGPNQAILFAHRTRTTAEVQPAIYWLLHSMLESRRPFEERCACLYAFRSATLGNPELQTTLVSAIANPGSAADHLRSFGPLLCGGLFAMNETGGSNWFASLALASLLDGNQQAKESALRVALALRLGEKAVPLLHQCILAAQQLAQTTSGAPGSTVRSRVGLLRLLCGWCADCPTATRALLQLGPTLPFLVENASQHTVHTPDGAGVAHGLSTLLLGICASNADDTNPQLGKGAIRQIVVHRIGLDSFTSQLNALEKTDAFVRASQHAHLSPLPDKGADAVLLDREFVSNFRDQSFSIDRVMRGLPPLQSAASQDAQHQLQQQQLQQQQQQQQGPQTPANGHTLAQSALGTGSSTPSGRPGTPDVTSSRPVSQLGTADAEADLGIVASYKEIIRKQDAEIAQLKKAFAEMQGSVQRVQAERDAHAATVERQRVQIEQGAQSAALQQQQIDALRVGSSAPADGAAVGVAAPDDGSARRVRELESELSALREKHTLLETEQEDLLMLMAEQDVEAKKLKARLRALGETISDDDEEDEGEEEDDGDDDDAAS* # ORIGINAL: g13909.t1 original gene structure, not modified by PASA NODE_455_length_23409_cov_41.0817 AUGUSTUS gene 17080 17881 . - . ID=g13909;Name=g13909.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS mRNA 17080 17881 . - . ID=g13909.t1;Parent=g13909;Name=g13909.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 17852 17881 . - . ID=g13909.t1.exon1;Parent=g13909.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 17852 17881 . - 0 ID=cds.g13909.t1;Parent=g13909.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 17080 17652 . - . ID=g13909.t1.exon2;Parent=g13909.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 17080 17652 . - 0 ID=cds.g13909.t1;Parent=g13909.t1 #PROT g13909.t1 g13909 MFGCIVAGRLVQAEPFQVGPTRFAFEIPDAGNINHIVVFLTGALPLPDGMGASVYFGWPRPETVWQYLGYIANDKPSAVFKLSKTRPKTSSERNPFGSDVDMMGVAGDERIVAQIGISIEPLGEIQQQTPANDATTQVTPTTVVTAVQKMLQNFFNYATSFAVPPAQLRAGETYVPSSTIMTWYGNFERRLQADPNFWKD* # PASA_UPDATE: g13910.t1, single gene model update, valid-1, status:[pasa:asmbl_7440,status:3], valid-1 NODE_455_length_23409_cov_41.0817 . gene 18510 20912 . + . ID=g13910;Name=g13910.t1 NODE_455_length_23409_cov_41.0817 . mRNA 18510 20912 . + . ID=g13910.t1;Parent=g13910;Name=g13910.t1 NODE_455_length_23409_cov_41.0817 . five_prime_UTR 18510 18746 . + . ID=g13910.t1.utr5p1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . exon 18510 18838 . + . ID=g13910.t1.exon1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . CDS 18747 18838 . + 0 ID=cds.g13910.t1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . exon 18969 19382 . + . ID=g13910.t1.exon2;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . CDS 18969 19382 . + 1 ID=cds.g13910.t1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . exon 19607 19908 . + . ID=g13910.t1.exon3;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . CDS 19607 19908 . + 1 ID=cds.g13910.t1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . exon 20155 20912 . + . ID=g13910.t1.exon4;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . CDS 20155 20627 . + 2 ID=cds.g13910.t1;Parent=g13910.t1 NODE_455_length_23409_cov_41.0817 . three_prime_UTR 20628 20912 . + . ID=g13910.t1.utr3p1;Parent=g13910.t1 #PROT g13910.t1 g13910 MGEYEYEREREPLIVNIENLGDVPATKTGLTDFGTAVNLFKCVIGAGCFVLPYAFMKGGLWFSVFALIALGALCAYTIGLLSRVEREVAFQTRREKLTYPELGYEVYNMAMAILIALGVILTIIGVCAFYVDFIADTMHTILNERLTVKEIKGIVFVPIILLSWIRSHKYLAFTSILGDVAVTLGMATVIGYGFAHNDLIPVDDLPAIRGGSISVFFSKSIFLFAIHAVTVPIGQSMKDPSRFPRVVNYTFAAITVVNVIFAALAYSLFGDNIQILALFNLSGTFGDVVQVLVCVDLFFTIPIVLTAPREIFEDNVIKIGKVGPARDTLVRNLVRTLMVCLIMTLAFLVDDIDMLTDMVGAVLSPWMAFIAPPLLYLKVFRGQISVAARIGQYLIIAFGIATAIFSVMNQVCQHHETPMCNAAFRT* # PASA_UPDATE: g13911.t1, single gene model update, valid-1, status:[pasa:asmbl_7438,status:12], valid-1 NODE_455_length_23409_cov_41.0817 . gene 21221 23220 . - . ID=g13911;Name=g13911.t1 NODE_455_length_23409_cov_41.0817 . mRNA 21221 23220 . - . ID=g13911.t1;Parent=g13911;Name=g13911.t1 NODE_455_length_23409_cov_41.0817 . five_prime_UTR 23167 23220 . - . ID=g13911.t1.utr5p1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . exon 23032 23220 . - . ID=g13911.t1.exon1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . CDS 23032 23166 . - 0 ID=cds.g13911.t1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . exon 22689 22730 . - . ID=g13911.t1.exon2;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . CDS 22689 22730 . - 0 ID=cds.g13911.t1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . exon 22421 22491 . - . ID=g13911.t1.exon3;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . CDS 22421 22491 . - 0 ID=cds.g13911.t1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . exon 21874 21961 . - . ID=g13911.t1.exon4;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . CDS 21874 21961 . - 1 ID=cds.g13911.t1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . exon 21221 21483 . - . ID=g13911.t1.exon5;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . CDS 21340 21483 . - 0 ID=cds.g13911.t1;Parent=g13911.t1 NODE_455_length_23409_cov_41.0817 . three_prime_UTR 21221 21339 . - . ID=g13911.t1.utr3p1;Parent=g13911.t1 #PROT g13911.t1 g13911 MYPLYPDGGDNEFLMQALINTQDVGVFSVEVTPFKSADTAFRGIDVKFYRGSLFKVYPVVVVVGMWLIIITEIWVAYLLVVNRWRKLENPTLLSFFASLIFALPSLRNSMPQAPAIGTVIDYGAFFWAEGFAMVCLFVSAARYNLDSKPVVKKPALSLA* # ORIGINAL: g13907.t1 original gene structure, not modified by PASA NODE_455_length_23409_cov_41.0817 AUGUSTUS gene 888 1864 . - . ID=g13907;Name=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS mRNA 888 1864 . - . ID=g13907.t1;Parent=g13907;Name=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 1724 1864 . - . ID=g13907.t1.exon1;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 1724 1864 . - 0 ID=cds.g13907.t1;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 1520 1592 . - . ID=g13907.t1.exon2;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 1520 1592 . - 0 ID=cds.g13907.t1;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 1198 1282 . - . ID=g13907.t1.exon3;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 1198 1282 . - 2 ID=cds.g13907.t1;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS exon 888 999 . - . ID=g13907.t1.exon4;Parent=g13907.t1 NODE_455_length_23409_cov_41.0817 AUGUSTUS CDS 888 999 . - 1 ID=cds.g13907.t1;Parent=g13907.t1 #PROT g13907.t1 g13907 MGQASSASAEEGDPTDISRPLLDGADAFGSGVVEFEGFEVSVNIYDLISANKYLVPVGLGAFHTGVVVHGEEFAYGFHKTSSSGIYLTDPRDAESWAPFRSNVVVGRTHMTKADIYLLLRKMGEKFTGNSYSIIEK* # PASA_UPDATE: g13908.t1, single gene model update, valid-1, status:[pasa:asmbl_7439,status:12], valid-1 NODE_455_length_23409_cov_41.0817 . gene 2597 16903 . + . ID=g13908;Name=g13908.t1 NODE_455_length_23409_cov_41.0817 . mRNA 2597 16903 . + . ID=g13908.t1;Parent=g13908;Name=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 2597 2822 . + . ID=g13908.t1.exon1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 2597 2822 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 3037 3172 . + . ID=g13908.t1.exon2;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 3037 3172 . + 2 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 3367 3478 . + . ID=g13908.t1.exon3;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 3367 3478 . + 1 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 3707 3838 . + . ID=g13908.t1.exon4;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 3707 3838 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 4025 4093 . + . ID=g13908.t1.exon5;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 4025 4093 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 4283 4385 . + . ID=g13908.t1.exon6;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 4283 4385 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 4563 4621 . + . ID=g13908.t1.exon7;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 4563 4621 . + 2 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 4848 4991 . + . ID=g13908.t1.exon8;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 4848 4991 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 5221 5402 . + . ID=g13908.t1.exon9;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 5221 5402 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 5674 11628 . + . ID=g13908.t1.exon10;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 5674 11628 . + 1 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 11810 15449 . + . ID=g13908.t1.exon11;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 11810 15449 . + 1 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 15629 15931 . + . ID=g13908.t1.exon12;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 15629 15931 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 16102 16245 . + . ID=g13908.t1.exon13;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 16102 16245 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . exon 16430 16903 . + . ID=g13908.t1.exon14;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . CDS 16430 16663 . + 0 ID=cds.g13908.t1;Parent=g13908.t1 NODE_455_length_23409_cov_41.0817 . three_prime_UTR 16664 16903 . + . ID=g13908.t1.utr3p1;Parent=g13908.t1 #PROT g13908.t1 g13908 MDVARAVDANVGGATAGVTGGTGNSTAQPFNNANSKAVAALAATLGIPATALNTPVVTAFEQELGRLLRWLRTDKDTTKKGREVKMKAEVKKEEADTKNAGDGADNLGPLPGKDENGKNRSWFAGQLCEIWSKYQSRLHPVYFYHKLISTGDYLFRQKEYETAQRHCYGRYLDRFRHGDEVFSLANVSHYFKETGAAVTVLTLRAIYSDSMCRFHMVSQVDPKLQSARTRAVVFDLLRRIRAAMQVAIPMEHLSWLVYNGTINIYVLCRPLMTVGLCGQVVEFLLWASLCMESVIPLVTIKYLKWRVQLYIAVCQCYFEIRAGDHAEAFARRALEKIRELETLEGMEGQHSTVPGARIAFQESRAKLNIMVFRKAIFKERDPPTLGFRYREVEPGSAYTNQIESLLTDLFEERQWMVRGMVEAMGDVQARIGLKSWGTGITTDADVFDPIPHVFTSCMRVMGMRTKAQLIQGYLDIMQKQMSQQQQQEQRMLVASFNRQTSIASMQVPHNTSKNASIFDVRQNQNRNSQFAGAYLNADVNLLSTETNPLNDKPDWIDEFPIPLLFRFATYAFQYEQSDCFLTVAPLLTARLERRRDSTSPPMIAALRIMQAVRALEPWKNPPAVVQPLQPPPPPANARNNANYATIVGVCENSPIQKAAMETVAAASRRDRELRNRLATEAKLAEEELRGFTWSRSSPGGIAVERIAPDAQVLELCNTLRAVSLSPHNGVFEKCPDLVLDAVRLAWRKLRPLVARVSGPVDTTMPCALPDAYEPVIEPLQTVYHVISQLGVQRFDPMLSAEVGFRLALLLEGQNKLTDATRMLRAVFKDTAKYLEIVSLDATRQLHVTADPQSHSALASLASAQLMQQSGVSSVQAMKDVRAPLLPVTDRALHTLHVDILSALFRIELRVTERRDDEKERLAHAALEGKKPRKDATAPQSSSSKKKTLDKVLSSECRRNPQWRAVLLIETAASMRVTSNAAIAEQARLLSEASTAITQAHRREEKHFAVCQKLNSYASDKTPPPPIVVARGPTWVVLKTQRFVPEGTTPGHVHTYRVFGKCAAGTSGSTKVSIIDSGLPGTGEEVPATHGCEFRITGLLPNEKYVFALAAYTPDGTLVGGSIGATGKSVVTAYPLPTLALWAHLCRAAYGAQQNSVAESAASILWNHFVLPRANPLGEADPVEGDEYAAQPERLNLENLAAAGTSMIRNFAESVLAWADLTIAHNGLFCMPFGPKVDARVSLQRDRLVVARRVLVAMDVAGTLNDHELLAQAAVRCYGVLAPIVHARIAPLPAIRILGRCLCALSELPIVLSARIQKTLTVPAPPVPHGPKINIPGIAAHYFVNEKANGGVSVGAAAAPTNPNIVTLMAQPTGGFEPDGTGVSARLRDLYAGLVFHIAESLRVAGERAGATHVLESCARFIASEIVSAKMRVEDPADDDDQPEDTHTKHGATQGQFGPKTSPPKRPPSTLILGTPVAAPPPSTLPSLRLSRATLRSMAELTSVGSLDRVNSRAQLSGKDATSVSNRLVQTQAAELLRMQQQNPGGAILLASSAGTADGHATVTPHGTIPGLGAIVTVPIPPELQPLEEYIHVVLRESTPVLPPDLTGDGVVLLLSFLSATPAEQGFLEIQRFKKNARYVEFICRVAEKGLVEGRSEQVSQWCEETLEWVKRRNEDVLNPNLQPEDSDDDIQSDVSRMVPGAPGVKKRKGPASDMARKERKKEIRKKGVAARPARLRMGNGDSVTEDAYHTAVSVLQQALPLYWREHRCRKRLRGILAQELKWHSQLTLVHGMCLLDSLVNKLEKRAFVDAMQQLQPNQQTHASGNDDSAAGAGTGSGAGGGSGTRPASRPGTGHHGHSQQQQEDPQASLFTRTTNPLSMDFEWFSLETTGALFREWNEAMTVRRVRARGSPDQSDYRPERHDDDLLHILLQFSRAAVFALRVRRRVLVHNACRHLFNCARIFSLGPLGSCASESGSSYQALASVAWLPFYVATDALLDTMAMDAERVVEGGSSGPGPDPERWVRSFVLHTLETLHENGRWHRLVDIGTRYNDLTGNKFSDAVMPLLLHAQASLNPSRSLSAGGQMVKLIHQAAEHGKSKSYSREAISRSRCLLVQYLAGRTNPSGVAGKESGSKSLVSTQSRAGRFGGRSDDAAFFGFGQEDTRVDKEDPAERAAREELTSRLASMGADQYRGDVELAPLSVEDAGVVIQSYERTIEMLRVKAETRLLWQAQNECGDFAFHLGRPKTATRLWMDALDSLLGEKMGISRWREVFVPTGGKPSLDGGAHHRAEIECLLLARCGVRGCLSAGILASKIAKYGNAGDLQARYEGHVFAGFLFGAVFKGSLPHPTHAVDFATYVPDELFPGVDIFADRFECSPQVLLDGLESTAAELIRNGHYMESLPLISLYEHVSALRCRDIFGTVNARVLRIEALANLDLFSEAVATMVDVLQGKSLPRAGIPLQRLKVTDATFASETSAHAAPAAPPPISQHIIAPPQPPIPTSSPSMGQSTQQGGGSSLGPAPSMSNVAQVPPPPPPPPVQTSQASQQQAEPTFGPDAFSNAHAVGDDRNAEVVAYLCSKRMSTALGVLYGPYLASRVRLVHATLLHKLAETTADLERKSRKPLFLPDETQKSAPVMKRAESRGMLKAVGRRMSMTLLALKANKSHIELPGSSLLLAQQNMSQVNLLARPESPRNSLAMVPATPDVSKTAPALPVAAPPPIAVDPGSSHDLTAADFSTSIGEHVPPPPPPPPPPQQTQTQTLPTLGPTTNTLTAVPSLTESEGGDSFSLQAGPTLSKPQLARRKSTAQARGLQPPAASQPSQPVVPTGKKKEAKTQLLQAAEQLLVVLCAGVRDAARDLELELRSEHAGADGVGAGAGASGDHGDKGSNSHLPGSETKPPQPQFAMPGLPSPIILSRMSLLDLDTLCHAQALLADIAGTRQESGLAVQICISIMSILKEAQARLRSMSRPEKDKEDASETRRERSASAGDSAAKASRTAAEDKSAHANATVDARCRSNLDGGFWLAMRLRLATFLLDRGYTEHSKRQCENGITECKDANAPHIRVRFELLRLLVSLQKGQTSTLIPDFERIVNACTGQGGHMRYVLVASLTYFADLMLERERLARVSPQLSLDSYKRAESIVLSDIHDVGNEWPIPFGSSSTTVNGTPKRPNNVFVHGWRHLARMKQRLGIAYARRNDFALALESMREGLDVCQQAVWSMPHIKAQLLLNLGRVHARAYTSFVGEQEIAFRGSIDADAIAEIVSGRPAAKRASSVDRSRGANPRASITLQLQALNVAAHLPRSMRGETAYEAALQLLNQAISLATSADHDHRVLRDAYLEMSSLYLLKGNMKLSAKALKDAASMSRMLSVLSRVPHQLASHKLTEKDLVKIPEYAAAEVVESKQSSQAGGSVALPPRMNLLTGLVPNSPTPRDGITSLSLACYLVLLQRETRVCEFSNDGCAAKVRRLHKYLREHVPPYASECCAPDASSEAAQVERLRARQKDAGTVVMQWYPSIDWIDMGRESGLEDGGYGREKSFVLMYLLSAPAPSAPALAAPTDAEKPVSARKDRDRDRERDHDKGEKGEKSSQSSPKTVALAKDRTKDSASALPGSGNSDATADEGEHGVRDFPASKVRALHHALRELRREIGESDDSAVDAYAGAHHADGKHAGQQDKPKESAEIPEFVKHMWTSCLAMLEDLLDTTAIESAVRTAFPAEAVAAVVTKADVVEETVSLSSSGNGQFEASVAAAQPAPTAVPTAPAPKPTLEFSRQMVNLLEAAFNPTGGVIDRNNELCAFLRARVPAHLPMGIIP* # PASA_UPDATE: g5093.t1, single gene model update, valid-1, status:[pasa:asmbl_1904,status:3], valid-1 NODE_1537_length_10641_cov_41.8145 . gene 3180 4738 . + . ID=g5093;Name=g5093.t1 NODE_1537_length_10641_cov_41.8145 . mRNA 3180 4738 . + . ID=g5093.t1;Parent=g5093;Name=g5093.t1 NODE_1537_length_10641_cov_41.8145 . five_prime_UTR 3180 3253 . + . ID=g5093.t1.utr5p1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 3180 3329 . + . ID=g5093.t1.exon1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 3254 3329 . + 0 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 3471 3486 . + . ID=g5093.t1.exon2;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 3471 3486 . + 2 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 3652 3782 . + . ID=g5093.t1.exon3;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 3652 3782 . + 1 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 3959 4079 . + . ID=g5093.t1.exon4;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 3959 4079 . + 2 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 4230 4330 . + . ID=g5093.t1.exon5;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 4230 4330 . + 1 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . exon 4440 4738 . + . ID=g5093.t1.exon6;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . CDS 4440 4603 . + 2 ID=cds.g5093.t1;Parent=g5093.t1 NODE_1537_length_10641_cov_41.8145 . three_prime_UTR 4604 4738 . + . ID=g5093.t1.utr3p1;Parent=g5093.t1 #PROT g5093.t1 g5093 MLAGNESGQQAITLKGSTEIVTEFFGYAINSVLYQRGIYPPDSFTRMKKYGLALLVTTDNDLKEYLTNVLSQLRDWLLVKTVQKLVIVITSADTGAAVERWQFNIECDKALSVAGAVQKGEKEIHNEIQAIIRQITASVTFLPLIEDKCTFDVLIYADKNTDVPLAWEESDARIIAKSQEVKLRSFNTTVHKIESLVSYRDE* # ORIGINAL: g5092.t1 original gene structure, not modified by PASA NODE_1537_length_10641_cov_41.8145 AUGUSTUS gene 88 2091 . - . ID=g5092;Name=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS mRNA 88 2091 . - . ID=g5092.t1;Parent=g5092;Name=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 1850 2091 . - . ID=g5092.t1.exon1;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 1850 2091 . - 0 ID=cds.g5092.t1;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 1606 1684 . - . ID=g5092.t1.exon2;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 1606 1684 . - 1 ID=cds.g5092.t1;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 1168 1430 . - . ID=g5092.t1.exon3;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 1168 1430 . - 0 ID=cds.g5092.t1;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 573 1034 . - . ID=g5092.t1.exon4;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 573 1034 . - 1 ID=cds.g5092.t1;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 88 369 . - . ID=g5092.t1.exon5;Parent=g5092.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 88 369 . - 1 ID=cds.g5092.t1;Parent=g5092.t1 #PROT g5092.t1 g5092 MVGMAPPPPSSSSTSKMANSGMFEVKFEGEETRDPSLGPNSLGLVRASSSAMRLEEAPKEKMTFYVTCVVLFAAIGGFIFGYDVGVIGGVIVMDDFRTEFDMPLKAQVNNTGGSCGNSVDDPSWVANDLGWVVSSFLLASFVSALGAGTLADVVGRRLSIIFGAILFIFGGAIQAGAVYLWMMYAGRVVAGLGIGILSCVIPFFISELAPRRYRGMLVTLQQLSITFGIMVAFLINLGIENVHNGWRYSLALQSAFAVLLLIGMLFLPETPRWLVQNGRPADAEAVLLKIRGGGDISYELEDLKCMVELDAKIGDGDWRELFEGDMKMRIIIGVMLQIFQQLSGMNAIMYYAPTIFQKLCLKEMIATAVTGIVNFLSTFIAVYAIDRVGRRVLLLSGAVGMFSSLVIAAAVLNNTDYQSNEIAGYSVVVMVCFFVMNFAYSW # PASA_UPDATE: g5095.t1, single gene model update, valid-1, status:[pasa:asmbl_1905,status:12], valid-1 NODE_1537_length_10641_cov_41.8145 . gene 8373 10502 . + . ID=g5095;Name=g5095.t1 NODE_1537_length_10641_cov_41.8145 . mRNA 8373 10502 . + . ID=g5095.t1;Parent=g5095;Name=g5095.t1 NODE_1537_length_10641_cov_41.8145 . five_prime_UTR 8373 8413 . + . ID=g5095.t1.utr5p1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 8373 8464 . + . ID=g5095.t1.exon1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 8414 8464 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 8686 8760 . + . ID=g5095.t1.exon2;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 8686 8760 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 9008 9081 . + . ID=g5095.t1.exon3;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 9008 9081 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 9407 9500 . + . ID=g5095.t1.exon4;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 9407 9500 . + 1 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 9725 9787 . + . ID=g5095.t1.exon5;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 9725 9787 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 9997 10083 . + . ID=g5095.t1.exon6;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 9997 10083 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . exon 10398 10502 . + . ID=g5095.t1.exon7;Parent=g5095.t1 NODE_1537_length_10641_cov_41.8145 . CDS 10398 10502 . + 0 ID=cds.g5095.t1;Parent=g5095.t1 #PROT g5095.t1 g5095 MRWKMASLPLRSAAVVLALRSRGVATVASRSFSSTSATASKKFRTEEDTFGPIDVPAHRYWGAQTQRSLQNFEIGGDRERMPEPLIKAFGVLKKAAAKVNMQFGLDAKVGTAIMQAADEVINGTLIDEFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGKLGGKLVHPNNHVNMSQSSNDT* # ORIGINAL: g5094.t1 original gene structure, not modified by PASA NODE_1537_length_10641_cov_41.8145 AUGUSTUS gene 6434 7948 . + . ID=g5094;Name=g5094.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS mRNA 6434 7948 . + . ID=g5094.t1;Parent=g5094;Name=g5094.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS exon 6434 7948 . + . ID=g5094.t1.exon1;Parent=g5094.t1 NODE_1537_length_10641_cov_41.8145 AUGUSTUS CDS 6434 7948 . + 0 ID=cds.g5094.t1;Parent=g5094.t1 #PROT g5094.t1 g5094 MPAFVGQGGQREQESDERTETLISRVAEQQHMQNNHNYHKEEDHGRHQHRLEPLFSDHMQEPVSPSRLTRHNAFDYEFGKQWKQEPEESHVNAWLSQAPGSAQTVIPNDVLRLLQSAALGPPAEHCREGSMHASIDSHPSLYSDSITPSASTSSEMGNGPDWESHPTEDASRRRSGSRSSHRTSCNSHNSSLEEVGGNFARAALEALSVKDACETPLSNAQLVRAEGIRLPHRRPDHPTLTHVDTVSHVDTVSISFDDGKGPAPSPSSSAFPKRQVHSVVTQQQRRARSTSDPQPDVHAFCHGCLLPRITPMRRPSRGGTPQSVICRCDNNAMQSDAGSNHFNTHGVATHQIHSAKPTAPSTLHNRGSIHSQDVHNLRRNERTCGTKLEPLEGMRHGSTAPSAPQSNSGESAHRHGHPVSNNSQRSRSISVGGAPPALYHSSQRDGAACRTTSQADDDSLQGSVEDDTANARRKRMTSGGATAQSSFDEFGGSALSVFGDAICM* # PASA_UPDATE: g1520.t1, single gene model update, valid-1, status:[pasa:asmbl_8195,status:3], valid-1 NODE_561_length_21170_cov_42.112 . gene 15837 19939 . - . ID=g1520;Name=g1520.t1 NODE_561_length_21170_cov_42.112 . mRNA 15837 19939 . - . ID=g1520.t1;Parent=g1520;Name=g1520.t1 NODE_561_length_21170_cov_42.112 . five_prime_UTR 19872 19939 . - . ID=g1520.t1.utr5p1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 18774 19939 . - . ID=g1520.t1.exon1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 18774 19871 . - 0 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 18138 18374 . - . ID=g1520.t1.exon2;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 18138 18374 . - 0 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 17705 17897 . - . ID=g1520.t1.exon3;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 17705 17897 . - 0 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 17263 17385 . - . ID=g1520.t1.exon4;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 17263 17385 . - 2 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 16698 16864 . - . ID=g1520.t1.exon5;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 16698 16864 . - 2 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . exon 15837 16552 . - . ID=g1520.t1.exon6;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . CDS 15989 16552 . - 0 ID=cds.g1520.t1;Parent=g1520.t1 NODE_561_length_21170_cov_42.112 . three_prime_UTR 15837 15988 . - . ID=g1520.t1.utr3p1;Parent=g1520.t1 #PROT g1520.t1 g1520 MHTRAPHPRAESNHNRIPRNGVRMNSTHRTLHCCANVSGMCLLLGIVVAAMAIPSVSADAIVFGYTPLTAPTVYDSDGVAFLTDDGKIEFVVFGNGFTNRTDITFTSSAIKCETSAGIVRLFQNGDSVDSNAASISVTLPFGVFYMCVDGSDHMGSSPLVTIRSVEKTLSVEERIPLAAKIVLILFLLCLSGLFSGLNLGLMGLDTTGLKVIMETGTPEERGYAKAILPVRQKGNYLLCTLLLGNVLVNNTLAVLLESITSGVIAVLGSTAAIVVLGEIIPQSACSRKPLAVGAKTIWITKMFMLLTFPMAWPISKGLDYFLGEEIGTVYQRAQLKQLLKITAKDIDLDNKEVAMVSGALEFSLKKVGEVMTKLENVFMIELSTKLDYKSMSRIVNSGHSRVPVFDKDRANIVGILYLRDLTFLDPNDGTPLKAIVKMKNRPVHKVFDDTRLDKMLDEFKKGKSHISIVQRVNDDGPGDPFYENVGIVTLEDVLEELLQAEILDETDVQEEVLKSPRSSHVFDSKAFAKFSQKVTLTPQMQAAVLSYLPSAVKPFADEFISQSVLKRLVERADIEEFHPGDEDIKPNTLYTAYVASDFFTLVLSGKVQLKIGRESFIFDSGPFTCLGVEALAGQYIPDYTAVAAGDTQVLRIPRSTYAAAVSASSLERTGISTPDNALTFSPVLSRELSRASFLSLPAPASASSGSVDVGVGVGAGPSSSDVAPPPQPNHNPFLGLGGDAPVAFRGWDSSDVASSSAAESLSNNFYSDGGYSHDDVAIELRETERTRLIGSDS* # ORIGINAL: g1515.t1 original gene structure, not modified by PASA NODE_561_length_21170_cov_42.112 AUGUSTUS gene 150 1213 . - . ID=g1515;Name=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS mRNA 150 1213 . - . ID=g1515.t1;Parent=g1515;Name=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 986 1213 . - . ID=g1515.t1.exon1;Parent=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 986 1213 . - 0 ID=cds.g1515.t1;Parent=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 635 787 . - . ID=g1515.t1.exon2;Parent=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 635 787 . - 0 ID=cds.g1515.t1;Parent=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 150 279 . - . ID=g1515.t1.exon3;Parent=g1515.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 150 279 . - 0 ID=cds.g1515.t1;Parent=g1515.t1 #PROT g1515.t1 g1515 MHSSAGEVRRRRADDATLSIDNDGYNDNLRGKKGIRRAGDSERDATPALSPIVALVFVLAVFGASVHFYRRLPEPKTAAATPTDVFSEERSRVHLDKITAFGVRTVGSYENEVLAVRYILDELTRIKAAATPGIRVDIEVQKPSGSFAIEFLGGFTSIYRNVSNILLRVS # ORIGINAL: g1518.t1 original gene structure, not modified by PASA NODE_561_length_21170_cov_42.112 AUGUSTUS gene 7347 9926 . - . ID=g1518;Name=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS mRNA 7347 9926 . - . ID=g1518.t1;Parent=g1518;Name=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 9279 9926 . - . ID=g1518.t1.exon1;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 9279 9926 . - 0 ID=cds.g1518.t1;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 8334 9068 . - . ID=g1518.t1.exon2;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 8334 9068 . - 0 ID=cds.g1518.t1;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 8137 8231 . - . ID=g1518.t1.exon3;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 8137 8231 . - 0 ID=cds.g1518.t1;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 7773 7929 . - . ID=g1518.t1.exon4;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 7773 7929 . - 1 ID=cds.g1518.t1;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 7347 7484 . - . ID=g1518.t1.exon5;Parent=g1518.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 7347 7484 . - 0 ID=cds.g1518.t1;Parent=g1518.t1 #PROT g1518.t1 g1518 MQHVEWPGVHGPGTPHKQEAHDKPAPRLSIVLPELISAGSSIAKPSREGFNAHRRGPFVGRETTGRRLPVLATHPPRVAAASAAPAEHTDAALAHTIPPRRQSSHAPADVRRASNTQKALSVEAMAHVIEEEDEEGEGDSGVGSSPLGADAAAAPRRAVTFDASAPGCDADDDSRRARRTSIVTLTLETVADVRNRKLEDLKRRGFTKPSFVKVDGAALPSPPVAGSAMIARTRRSIVYAAGFAAGRASIDDRGGYDPAHPYTHQHPHTHPHDHHDYDADAAGAAPPRRVSVFHRMSNARASIFEFQPRSFRNSIFEYPIGEIPLPKKAKAGRKAPNVVTEARIKKMKLMEADKRQKKKESDELAAEMEAKAAAENSELESSAHMRQRMRGCIEHARTNNIISEQQSYRFTLLFRALDTGGKGVLTMEELKQGLEHVTVEEGGQIEYLSKATRTKVAYIMKVLDLDGNNAIDEDEFVVSMALCERINEMEGKSSKEGGPLNGEFDFARLEREIKHYRQLFLLCDADGSGFLSVDELQVLLASSGQVASLSEVQAILTQMDKDNNGVVDFVEFLAFIPFFVEIHERLVGNV* # PASA_UPDATE: g1517.t1, single gene model update, valid-1, status:[pasa:asmbl_8197,status:12],[pasa:asmbl_8198,status:12], valid-1 NODE_561_length_21170_cov_42.112 . gene 3815 6376 . + . ID=g1517;Name=g1517.t1 NODE_561_length_21170_cov_42.112 . mRNA 3815 6376 . + . ID=g1517.t1;Parent=g1517;Name=g1517.t1 NODE_561_length_21170_cov_42.112 . five_prime_UTR 3815 3870 . + . ID=g1517.t1.utr5p1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 3815 3948 . + . ID=g1517.t1.exon1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 3871 3948 . + 0 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 4097 4191 . + . ID=g1517.t1.exon2;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 4097 4191 . + 0 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 4376 4526 . + . ID=g1517.t1.exon3;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 4376 4526 . + 1 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 4709 4932 . + . ID=g1517.t1.exon4;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 4709 4932 . + 0 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 5293 5384 . + . ID=g1517.t1.exon5;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 5293 5384 . + 1 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . exon 5735 6376 . + . ID=g1517.t1.exon6;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . CDS 5735 6117 . + 2 ID=cds.g1517.t1;Parent=g1517.t1 NODE_561_length_21170_cov_42.112 . three_prime_UTR 6118 6376 . + . ID=g1517.t1.utr3p1;Parent=g1517.t1 #PROT g1517.t1 g1517 MALLPPLEDLPLWDTWLSQWVFPTITVSVELGLFNLLDTTPGLQTAEIAQKLSLGVRGTQALLDVATGSKYLTRTGGRYYLSPSTRTFLVQSKHFYWGDMLLGDKFSQPHDALKKAIEADKPVIGAAEAWELGELSAEKAEELTAGFQSHSAAAAAGMTAAFDFAAEGITKLLDVGGGSGCFSIAIAKKFPSISVTIMELPVVCPIAERYVRNEGMSTQVTTRAVNMFTEPWPQQADGFDAVFFSNVFHDWTDAQNLHLAKSALGTLRPGGRIVLHEILIADDRSGPLTASLFSMHMLVYTRGKQYTFLELSDLLTTAGFTDVRVLPTYGYYSVVIANRP* # ORIGINAL: g1519.t1 original gene structure, not modified by PASA NODE_561_length_21170_cov_42.112 AUGUSTUS gene 11510 15204 . + . ID=g1519;Name=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS mRNA 11510 15204 . + . ID=g1519.t1;Parent=g1519;Name=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 11510 11579 . + . ID=g1519.t1.exon1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 11510 11579 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 11798 11897 . + . ID=g1519.t1.exon2;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 11798 11897 . + 2 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 12068 12198 . + . ID=g1519.t1.exon3;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 12068 12198 . + 1 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 12349 12530 . + . ID=g1519.t1.exon4;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 12349 12530 . + 2 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 12728 12909 . + . ID=g1519.t1.exon5;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 12728 12909 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 13160 13368 . + . ID=g1519.t1.exon6;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 13160 13368 . + 1 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 13529 13668 . + . ID=g1519.t1.exon7;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 13529 13668 . + 2 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 13833 13997 . + . ID=g1519.t1.exon8;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 13833 13997 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 14253 14435 . + . ID=g1519.t1.exon9;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 14253 14435 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 14580 14746 . + . ID=g1519.t1.exon10;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 14580 14746 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 14899 14989 . + . ID=g1519.t1.exon11;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 14899 14989 . + 1 ID=cds.g1519.t1;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 15139 15204 . + . ID=g1519.t1.exon12;Parent=g1519.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 15139 15204 . + 0 ID=cds.g1519.t1;Parent=g1519.t1 #PROT g1519.t1 g1519 MNRSLVRSRNDKNEVEVVQDSGLVEQELAKLQRQYRIMEGDRKAYGEESQQTIRKQRATIDKLQRDNEYLNGELVMAESRSAELKDGDSTKRLQDLSSQSDQYQRKIKQETQRAEDLDKEIKEYNRKIGEQRRRMGGVNAASQNNIATQKQIRVLENRLDKALVKFNKSLAYNKQLRENIDSLRRERVVFDNIYKKLEKELVEQKKLMGEIIEGSNQAYEARDEAQAKMIALKEKAEKELTAYNMELKELTRILEHDKKLKSFMGLKSQDRSVKEQAVSEDLRSASKKKRKGNFEAGKDKAQQQTSQETVQSYEEAFAKIQEATGIQDIDMLVEKFIEVEDQNFSLFNYVNELNNEIEKLQEHIAQIRSDIERFKGQGVNMDNQRKKILKELEDRLAATEQQADAYDQKYVVASKTVNHLKQGVQNLFQRIRCDKSAINDMLGNSGVTDTNMMQYLGIIEQRVNEMLQMYHFMNAKDTDKTEAAAVVGGLLGQGPQPPTGPVSILPPSTGDDYESDDDEVSDEDQRPLTRDELKMRTLRGIAKRENQPQKTKKGRTDRKKK* # ORIGINAL: g1516.t1 original gene structure, not modified by PASA NODE_561_length_21170_cov_42.112 AUGUSTUS gene 1827 2597 . + . ID=g1516;Name=g1516.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS mRNA 1827 2597 . + . ID=g1516.t1;Parent=g1516;Name=g1516.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 1827 1926 . + . ID=g1516.t1.exon1;Parent=g1516.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 1827 1926 . + 0 ID=cds.g1516.t1;Parent=g1516.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS exon 2239 2597 . + . ID=g1516.t1.exon2;Parent=g1516.t1 NODE_561_length_21170_cov_42.112 AUGUSTUS CDS 2239 2597 . + 2 ID=cds.g1516.t1;Parent=g1516.t1 #PROT g1516.t1 g1516 MSVPTEHSPLIRADDDTRIAIQSVPCAEEKDNIGSRKSLLIDYLCVDPTVEAENVRSSTPLQQTATGDVHVTFSLPPNHPNHPNRAMDAKPIRITPLSRWVIVTSGHCGPLLLLLPLTLLLEAIGMAVCAAFFLLFVFLDMFSYCGTNFSAK* # ORIGINAL: g11824.t1 original gene structure, not modified by PASA NODE_3751_length_2828_cov_43.2724 AUGUSTUS gene 115 2618 . - . ID=g11824;Name=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS mRNA 115 2618 . - . ID=g11824.t1;Parent=g11824;Name=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS exon 2351 2618 . - . ID=g11824.t1.exon1;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS CDS 2351 2618 . - 0 ID=cds.g11824.t1;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS exon 2054 2161 . - . ID=g11824.t1.exon2;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS CDS 2054 2161 . - 2 ID=cds.g11824.t1;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS exon 881 1689 . - . ID=g11824.t1.exon3;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS CDS 881 1689 . - 2 ID=cds.g11824.t1;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS exon 594 693 . - . ID=g11824.t1.exon4;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS CDS 594 693 . - 0 ID=cds.g11824.t1;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS exon 115 326 . - . ID=g11824.t1.exon5;Parent=g11824.t1 NODE_3751_length_2828_cov_43.2724 AUGUSTUS CDS 115 326 . - 2 ID=cds.g11824.t1;Parent=g11824.t1 #PROT g11824.t1 g11824 MIRKSCPRSRLLSAALTCRSTSFDALFATPEDGVASETSRDGLADGRVSTESAGCDGNGVVLRATFSDLEMVVGRVRLPSIAPVGAKSKGLSGLVQQCFGKPLNKSQQMSDWERRPLHRAQAEYAALDAYCLVLLHEFIESHAKDATSTTAAAVSSGLEMGTGFSSAPNPAKSVHPHLLPAVSGRSGKVNAVDDGELVASSSDDSESSDPAVFSDIRAGVSEGVQTVGDGAVVNRVSGETRREIGKKGERGFGKGKSRDVTGSPAQKTRTEYVRDAATRLPSDHVPKAVEGGVTGGHVGDDDGDDAQGSGAFNPPTIIRVVVDNMLSKLGKRLRSCGVDAAIHSTDSIKQIVALSRKEDRVVFTKGCRYDMIRKHVSHDRCYHVKAPNTLEQLREVLNEYHIRVRPEDVFSRCQACNGASYTERTPVEVGEAASRGVAQAADVPPGVLLKIPLFYECVQCGKYYWDGRHFGEVLKRLDGVLADVPDEPGEASSSVPSL* # ORIGINAL: g4243.t1 original gene structure, not modified by PASA NODE_3134_length_4235_cov_43.4899 AUGUSTUS gene 145 3875 . - . ID=g4243;Name=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS mRNA 145 3875 . - . ID=g4243.t1;Parent=g4243;Name=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 3800 3875 . - . ID=g4243.t1.exon1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 3800 3875 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 3173 3251 . - . ID=g4243.t1.exon2;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 3173 3251 . - 2 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 2812 2956 . - . ID=g4243.t1.exon3;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 2812 2956 . - 1 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 2311 2616 . - . ID=g4243.t1.exon4;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 2311 2616 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 1940 2156 . - . ID=g4243.t1.exon5;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 1940 2156 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 1493 1572 . - . ID=g4243.t1.exon6;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 1493 1572 . - 2 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 1157 1280 . - . ID=g4243.t1.exon7;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 1157 1280 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 743 861 . - . ID=g4243.t1.exon8;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 743 861 . - 2 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 417 614 . - . ID=g4243.t1.exon9;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 417 614 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS exon 145 286 . - . ID=g4243.t1.exon10;Parent=g4243.t1 NODE_3134_length_4235_cov_43.4899 AUGUSTUS CDS 145 286 . - 0 ID=cds.g4243.t1;Parent=g4243.t1 #PROT g4243.t1 g4243 MGPTMNINTLIAKIAGTIFAVGAGLGPMIHVGAIIGVVLSRYSILAKTLSRWVAKKHQADAALDHLSSDRELRVFAATGAAAGVAAAFRAPVAGATFVIEEAISFFHPRLIYRVFFTCVCAYWILAIVSQNGNLNAAAFALYKDPTVCNSTLNYSDIIVYIVMGIVLGALGGLFNLVNVALQTIRQKHIIPTPWRRVLEVIVVSIITASIVVLVPQIDASCKPTANALHQIPEDKVCSVLDDERVCKYYQVELNLLEYLVTDTSNTCPPLANLTYNIEFHNARMSMDGNVTCYNELSSLFQVTAGEALKNLFTRGAYSLFSATNLTIFTFFYIFLIVITVGIAIPAGSVLPAMVFGASIGRLCALGYNAGIKEPLGYHTVDPGIYAIIGAGAFWAGFANLPLTVTLVMTEITASFDALPGLSVAVVVSAWVGQLVHKSLYHGLLAVMKIPFLDAEPTHDMYYKNTETVMSTPVVCLPRKVTSRQITDALVTNNHH # ORIGINAL: g650.t1 original gene structure, not modified by PASA NODE_321_length_27037_cov_38.8268 AUGUSTUS gene 19783 26861 . + . ID=g650;Name=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS mRNA 19783 26861 . + . ID=g650.t1;Parent=g650;Name=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 19783 19830 . + . ID=g650.t1.exon1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 19783 19830 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 20251 20545 . + . ID=g650.t1.exon2;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 20251 20545 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 20776 20863 . + . ID=g650.t1.exon3;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 20776 20863 . + 2 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 21179 21265 . + . ID=g650.t1.exon4;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 21179 21265 . + 1 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 21459 21613 . + . ID=g650.t1.exon5;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 21459 21613 . + 1 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 21837 22048 . + . ID=g650.t1.exon6;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 21837 22048 . + 2 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 22369 22532 . + . ID=g650.t1.exon7;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 22369 22532 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 22805 23255 . + . ID=g650.t1.exon8;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 22805 23255 . + 1 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 23475 24764 . + . ID=g650.t1.exon9;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 23475 24764 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 25013 26020 . + . ID=g650.t1.exon10;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 25013 26020 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 26173 26293 . + . ID=g650.t1.exon11;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 26173 26293 . + 0 ID=cds.g650.t1;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 26458 26861 . + . ID=g650.t1.exon12;Parent=g650.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 26458 26861 . + 2 ID=cds.g650.t1;Parent=g650.t1 #PROT g650.t1 g650 MAFDSGGNQRTNVFPIAELSRVTWRCLTSAPVSGADAGALTSPVVAACLRCLDANVAACYSLSDAILGEDTSSVGGGTPAPAPAPSVSRLWVFAMRDADEKGIAGALSGIEDLKEHSAGAFVSISDATLPWFQLSRAVYNLIQRVFALRGYVRFGDHFVSTPTDDRSASVHTAIPSVSVSLSVHGSTLCMRCRPRGFGGRPVRPRDLARASAAVRDGRVDQSVPVFVAPASNVGYLTGRSVALAESFDADDMRDSVVGEWRYEPTQTASACRASYRALSSVHPRLAMAKRGFALEVVVENVRLLIPSEFVLVSSFGGEGGVWSRGAVERLIARSMVAPFNTEEQPRKTEGAGDSVVPAPSLWDMRDLIERSLLDARIVTPPRPPTPPAPQPLQQPQSHAPTEGHNGPISGDVTLPPAKATATPVPDEADVASVGVGVGVGARETALSSPDIESLLSPRKRGSEAGVGANGDGVGDAQDAAKTLQPLPEITDDDFEFFEAKFDEGVGPIAGITPPNQTSHVHVEPSPAPHDQTASAPSAGGPDSHYFFPTPTSLSPPQATQMHPGQTASLVAHEHSDGHSSSLSSSSGVALSSAPPAVTTPKDGAGSGGNDAGAVVAERRQSFFDEFALPIPFLPNSSFSPVGGIGDDMSRATVGRSYIPSRIGSAQPMTYTPEGYVPVCAAHYLSLSHVHLSDKGDDCGRGGRTSSQCTCAKADDPGSASDPSLPRGKRRRVEGRRSGGPFAQSEMDWSRHAVPDCEMADATGDLMSPMAVEMDVGDGGERGDGMDGSGGDNNSSGDCDDDEDDNDTDSLRSSRSGSQSPPPQAQSPPASTTAASAECESFGGVFLSCVFMWIASMDARLQPSAMDALAIGLRSGDLRDSGVIVHGVRVTPPQGSMHALVESVAAASKAFSRLMRMSACASAALTWGELERDHFEPSPLDTDSETDGRMASLKVLASLAGLAMSTTDSGAVTITRTDPSLVLGSRLSPSLARSLSSSSASLSMRRRARGSNPAARSMSGTFRTLFSHESVTSDNAMTKEWRDIFADLAKQVAANAASASECVDWALLDGVADCVRALSPCSATVVSAGENVDMNDANASMDTRTDGRFHSEGPNNSPLFLSLGAVACLVDASTPSVVLCPSAEADGMNFLFPPDVSAEGISTAVAGVVPNGVSGVVVARRSAGRPGIGTVGVPAVVVGRQGDWLSLSPLALSFWDRLALEPVCGQKDVRGSVVCPAELFAPRRIVGTTDGHRAGKAFVEDLSCVYEACRLGRFLPVGDGVAVVGQPGTASTVTARVVDYLKTFRHLVASFVASDRNRDSPASETPPYLVVFALDPYGQPSLSAGFDNASSFARELVGAFALVLAEFPAAAHRSVLHLLPLSALYGAPSTYAARLKSLAFSVFAKLRMPSAQRNADLEDAAGAGERVRFLCCTAVQARCCA* # ORIGINAL: g649.t1 original gene structure, not modified by PASA NODE_321_length_27037_cov_38.8268 AUGUSTUS gene 14751 17658 . - . ID=g649;Name=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS mRNA 14751 17658 . - . ID=g649.t1;Parent=g649;Name=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 17563 17658 . - . ID=g649.t1.exon1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 17563 17658 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 17251 17322 . - . ID=g649.t1.exon2;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 17251 17322 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 16683 16809 . - . ID=g649.t1.exon3;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 16683 16809 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 16122 16438 . - . ID=g649.t1.exon4;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 16122 16438 . - 2 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 15793 15864 . - . ID=g649.t1.exon5;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 15793 15864 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 15514 15606 . - . ID=g649.t1.exon6;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 15514 15606 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 15159 15241 . - . ID=g649.t1.exon7;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 15159 15241 . - 0 ID=cds.g649.t1;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 14751 14832 . - . ID=g649.t1.exon8;Parent=g649.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 14751 14832 . - 1 ID=cds.g649.t1;Parent=g649.t1 #PROT g649.t1 g649 MSNFGDATVDRLPLGRHVVMLDSNSNLGTAMKTLVSNEILSAPVWDEEQAKFLGSMDMFDLVSIFVATFKEDELNKGNINALMEKHELFASTPIKHLIDFSLRNPFVTVETGTPLDSVVRRLAGTEQQWVRRVAVVEPKRVGATSLVSIVSQSGMIAYVSRNKSILAPIRTRTVHEIITREKGHVVSVTADNKVIEAFNLMKKENVSGLAVVDHNGILIGSMSIRDLRGLLVQGGILDLSRLLYSVRQFINFLNQMSVDERHPAVSVTRYDTIERVIDIFAMVRVHRLFVVDEEYKPVGVLSRVDVLRSILQA* # PASA_UPDATE: g646.t1, single gene model update, valid-1, status:[pasa:asmbl_5734,status:12], valid-1 NODE_321_length_27037_cov_38.8268 . gene 62 1641 . - . ID=g646;Name=g646.t1 NODE_321_length_27037_cov_38.8268 . mRNA 62 1641 . - . ID=g646.t1;Parent=g646;Name=g646.t1 NODE_321_length_27037_cov_38.8268 . five_prime_UTR 1422 1641 . - . ID=g646.t1.utr5p1;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . exon 1236 1641 . - . ID=g646.t1.exon1;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . CDS 1236 1421 . - 0 ID=cds.g646.t1;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . exon 858 994 . - . ID=g646.t1.exon2;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . CDS 858 994 . - 0 ID=cds.g646.t1;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . exon 597 643 . - . ID=g646.t1.exon3;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . CDS 597 643 . - 1 ID=cds.g646.t1;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . exon 62 216 . - . ID=g646.t1.exon4;Parent=g646.t1 NODE_321_length_27037_cov_38.8268 . CDS 62 216 . - 2 ID=cds.g646.t1;Parent=g646.t1;3_prime_partial=true #PROT g646.t1 g646 MDEPSVLDDETQNDLELSFKKKEPTRGRRAQLGNFTRQESDDVLRDSAPSAMAPSARQEGVGASPEPARAVRKGGWGNESVSESKSNLAPSSSGGKREALQSFSVSDSIDDSRRSDDKRDSDDEMPVIPDLEQVQEEDLSTQIAAPPSVKMSRMATIRELDSDLSQQFGFLASAS # ORIGINAL: g647.t1 original gene structure, not modified by PASA NODE_321_length_27037_cov_38.8268 AUGUSTUS gene 2177 11130 . + . ID=g647;Name=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS mRNA 2177 11130 . + . ID=g647.t1;Parent=g647;Name=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 2177 3694 . + . ID=g647.t1.exon1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 2177 3694 . + 0 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 3814 4185 . + . ID=g647.t1.exon2;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 3814 4185 . + 0 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 4431 4632 . + . ID=g647.t1.exon3;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 4431 4632 . + 0 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 4857 4934 . + . ID=g647.t1.exon4;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 4857 4934 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 5209 5369 . + . ID=g647.t1.exon5;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 5209 5369 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 5654 5819 . + . ID=g647.t1.exon6;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 5654 5819 . + 0 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 6172 6468 . + . ID=g647.t1.exon7;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 6172 6468 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 6730 7071 . + . ID=g647.t1.exon8;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 6730 7071 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 7280 7417 . + . ID=g647.t1.exon9;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 7280 7417 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 7860 8007 . + . ID=g647.t1.exon10;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 7860 8007 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 8201 8320 . + . ID=g647.t1.exon11;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 8201 8320 . + 1 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 8500 8837 . + . ID=g647.t1.exon12;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 8500 8837 . + 1 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 9041 9231 . + . ID=g647.t1.exon13;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 9041 9231 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 9551 10037 . + . ID=g647.t1.exon14;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 9551 10037 . + 0 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 10286 10767 . + . ID=g647.t1.exon15;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 10286 10767 . + 2 ID=cds.g647.t1;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS exon 10993 11130 . + . ID=g647.t1.exon16;Parent=g647.t1 NODE_321_length_27037_cov_38.8268 AUGUSTUS CDS 10993 11130 . + 0 ID=cds.g647.t1;Parent=g647.t1 #PROT g647.t1 g647 MSAASATVPTAAVSNGDRIRDRENATHISTGGSSFPPPIRMLPSSPNWYCGRACDANVSTSTPLVAFASKSAVTLLDARTDKPMFVGTLSAHVDRVSAVCFSPRSESSSLLCSGGVDKKVNVWDVRTRSVIGSHNMHSCEVTSVCWSSTVPDEIISGDKDGFIVVWKHSTPARDAKKTKTGDGYIVCMAAPPESSRASMSSVGARNIIAAGHKSGMVSVLEIAANGTTSALFRLRGHEDEAHGIAWCPPLERDRAADQDSHPQRTHLTPRRHSTSNARELTMMDTMMEEGSLGIDIRTGDTAAEVTGALESDLNATNASLLKLFCTTSRDRTLRLWNVDTGTCERIVRMPKGPQHQQEDHRHQGDRARTWLPLCWVFPQMLVTGSAGGDLLAWNVFATEGPRRLSGSGHTRVVFGICAVRDALGKPTSLVSVSMDRLVVGWDLAAMKSRWSIPSLGGFVYGVAASPTERGRVAVACGDGSIRVWHTMKAGGSGYDALVLWRGLQGKITCVAFSPTEEGLLAFASDDGHVGVYNVHTQKHQLFSSSHQGTVYALAWRTCPVVDGGASAAVDDAKRRQGQKGKKAQVESSSCLLYSCGGDGILWEHPPGGGRARNMDDVIADANPEWAAQMKRKFPKRSDVCFSTEGSLFSIGNADGSVEIYRQEGGALACVLGGHKRAINASKWSHFDRTARAQGRVWDDSWAHLLATAADDGTVRIDDVSKAAASSASVASAIAPYPGASRSVVLRGHDGKKVTCLSWCTNALPPRIATGGYDGLVKVWDALSGTPICAYTGHIGRIFSVLWSPWNADEIFSGSDDQTLQLWRPSLQSTEEPPAKRRKVQHSGEHPSAQPAVLSAAPDALDRMHVELADGVSVLRPGELGRPQQQQQEQQQQQQQQQQQQQQQQQQPKNTQLQGLPSSKTVTKAHDGDVTKSGKRSRGKGKQSQPFQAHAGDHHHSGHSHATHAATQQSHSGKARTLLPNANTAGETKATSLAACVELARRRFGTARAGEVAPNAVARAEAVSVNFADLPLFLGSDDAWSCISAQSRDHRGCGNALQHTQLEIAMGNVHGGIEAAIRDGTLSDAWIAVAPMAGPDVWLRATSAYADQLKRRGDVHGACMHYIACNRTADAITAYTDAQMFKEAIALAQVRLAPSDPLLADTFLAYARAMEERGFYEQAAKCYLAANLPQQAVRAAMRRGGPDALIAAGCIALATGDGVSASSCLLSAGCTLREQAKLVDALACYEAGGTPLVWMVMVTLADIVLCGGLAAVPGDARGTMGAVLVGGMRLSPDDRIHIAALGIVLGGNHVQTVDSSNIFGEILSAWAHRGVVLIPEGLNAAYDAMVKSRADEVFGKDAAHGSIVLRICRALASFLVGDVIVSCAELLGACHLLLGRVPSTASASRIVSDANIALHLRLCIATFPLHNPREYMGSVDGHVHAETRGIVSVNAADAGSMRNATDFVSTDASVVARGEALACVWAHHCLALGVEICGAVLPDSSDAEGAAQFAKAIVSSIVARASKPSLSGIFSQDTLVSLARTLLCVDPSPLAGLSTVRKYVSAAIATAERAVALASDASEKEQGSVADGTELDDDDAGAVDTHEPLADPLASGNVGVDGRDGTEIRGTNGSHNSKAGVGEGEAGVTVSGAHARLRSLRMELIRLDAAIAAASARADVAPEVRYFPFPDPRISVPILARLVRAAHRDGALDGQLGAVAVIVDAYAFVV* # PASA_UPDATE: g648.t1, single gene model update, valid-1, status:[pasa:asmbl_5735,status:3], valid-1 NODE_321_length_27037_cov_38.8268 . gene 11557 14127 . + . ID=g648;Name=g648.t1 NODE_321_length_27037_cov_38.8268 . mRNA 11557 14127 . + . ID=g648.t1;Parent=g648;Name=g648.t1 NODE_321_length_27037_cov_38.8268 . five_prime_UTR 11557 11754 . + . ID=g648.t1.utr5p1;Parent=g648.t1 NODE_321_length_27037_cov_38.8268 . exon 11557 14127 . + . ID=g648.t1.exon1;Parent=g648.t1 NODE_321_length_27037_cov_38.8268 . CDS 11755 13974 . + 0 ID=cds.g648.t1;Parent=g648.t1 NODE_321_length_27037_cov_38.8268 . three_prime_UTR 13975 14127 . + . ID=g648.t1.utr3p1;Parent=g648.t1 #PROT g648.t1 g648 MDGKRPVSLADASACVLLQQPLSVRRRHLYAVLGMMQKQFAVNNRISIEDAHADSDANEQEEQEEYGDGSGISVHLNRAVPPINLALLLSVRTRDDAVCNNDDGIGASHARLERNGVHQSLRPQQPIHVGEMQNEENHASHALHLWHGALIATAALLSVRPSGRLEDAMCDVVHHTPSVFTAHQSRQQSFSFISHVHSTTNADVVCASRDILLRFRGGICSDASLGARIFLRICTPSLSMDLRCAARIGSRIGGGAFSDVHECGVLSIPSGSDPDDELAHSTMHNRTEMAVKALPESVDYVDAGRCAVGDAHAEVWALSRLRRLAKLRASCEGDSCADVKLRKDDKVGDCWKRDCELATERSRDAQCNLFGGVFLASDGERCIITHLARIGSLHRWARRIRDGKDITGMRHRLDACNVADRSCDIYEQQEGGEEGEGEDDEGGEEERGASMCTLSVDRLRSTLQEWLALRAHRISDNGSQNAQATTASPLPVAPIAPILRLLCAVRSALASLACVAAAGVVHADVASANALVVSDDVTLGYPLTTCVILCDFGECCIATAHPSCEIPPLGAVDATQIARDALPSTAFPLVYSQDMRCVHRARGRACTRSPESAGADFTACAAAHSASEDVWAVGCLLYELVTGVQPFSDSDPARLYLHHMRTSDTRSGEAVVAAAVATGLSVALGKRFVRSAMGLGATAGGAVALCVYLGRLLSVDARLRPTAGDAVGMLDAIVWRVCL* # PASA_UPDATE: g2306.t1, single gene model update, valid-1, status:[pasa:asmbl_5766,status:12], valid-1 NODE_3245_length_3921_cov_47.0471_potentialcontaminant . gene 98 2429 . - . ID=g2306;Name=g2306.t1 NODE_3245_length_3921_cov_47.0471_potentialcontaminant . mRNA 98 2429 . - . ID=g2306.t1;Parent=g2306;Name=g2306.t1 NODE_3245_length_3921_cov_47.0471_potentialcontaminant . exon 98 2429 . - . ID=g2306.t1.exon1;Parent=g2306.t1 NODE_3245_length_3921_cov_47.0471_potentialcontaminant . CDS 570 2429 . - 0 ID=cds.g2306.t1;Parent=g2306.t1 NODE_3245_length_3921_cov_47.0471_potentialcontaminant . three_prime_UTR 98 569 . - . ID=g2306.t1.utr3p1;Parent=g2306.t1 #PROT g2306.t1 g2306 MPPIFSSRLLLLPLGDSGKSEGKLESSGSKSSLSAGSSTVRRTTSHPGYGAGAQQPASGDPTAEVGTFTVADLISSLQSDYAEFQEIAATFERSNSTAERLAVGGRLLRRAKAYCTSIEKAIHPLLAAVDPECSAECVEAFSTVSDGVEVAESLDSQRQHAEWTQALNDATALLRTQMHEYNTFVFPRLLNPTPSASAATTTKTTTTTTAASGGLQSTSTKTLTPSTPSSNASQTPMSLTSEDICVPFPPRFDAPDVSITLSRDGIASSSQSISESADTLRPADSSTSLSGRSRVLQRMPVPGRRLRSISIGSYPVASSTPLLSPCRPTPLLLPGDGEEPFLNVHPATPIVQDKPSSDHPLFAASLSPRRKTSVSASSVSLSTNSAAAAASSDTVLNLSQLSPRRGCASQNALTGSTDSGFSSSTASGLYSSGGVYASGLSTCSTQLASNSHSSISTRRSSIESAQQNIMTARSAQSLSLFNSYGASRRVSTSQMDRTTSELLQQLLPAGTAFDAPTRKSSQGSSPSQSTSLLSSPRRSMMTEDGVTITSLSSGPSRSPSFTPSMAPEFFPSETHEAWMAREGCGNGNNRDCPPSPPQRGTARFSLGALPPLSPRRGSN* # ORIGINAL: g1362.t1 original gene structure, not modified by PASA NODE_3686_length_2962_cov_37.3918 AUGUSTUS gene 124 2764 . + . ID=g1362;Name=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS mRNA 124 2764 . + . ID=g1362.t1;Parent=g1362;Name=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 124 263 . + . ID=g1362.t1.exon1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 124 263 . + 1 ID=cds.g1362.t1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 660 757 . + . ID=g1362.t1.exon2;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 660 757 . + 2 ID=cds.g1362.t1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 1057 1230 . + . ID=g1362.t1.exon3;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 1057 1230 . + 0 ID=cds.g1362.t1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 1489 1582 . + . ID=g1362.t1.exon4;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 1489 1582 . + 0 ID=cds.g1362.t1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 1766 1852 . + . ID=g1362.t1.exon5;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 1766 1852 . + 2 ID=cds.g1362.t1;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS exon 2217 2764 . + . ID=g1362.t1.exon6;Parent=g1362.t1 NODE_3686_length_2962_cov_37.3918 AUGUSTUS CDS 2217 2764 . + 2 ID=cds.g1362.t1;Parent=g1362.t1 #PROT g1362.t1 g1362 TIAPFFYKTWTPDPDTAGTTELLFHPVYNPTPIFEIMMTTYAMELSGEVHVYIDGVDNRREVKVPIYDRSDRTINFGVRALIMNNKNVERISFHIASKTYSVDTDCVSFLQDFNVDLQLWSLQGCGTRKDFPLVSCDVGFYDRTSDFKRGPVPVMIFDNGSGGPVDMLYCDNILFTWMFVNDISSPLQCSEMSKRHSLVSWNIGPYASWLRRGGVINAENDALGTLLNVITNSNIVALQNVGTRADAAALLALVNSKVLDDSSLGSARDKYSCCASDDGVAFIFRSARNHFVVTRGSDDCNCGSEVCKTGDELLNLVGGSIVKSNTGAKAYTDVPKSLICKFEHYPVCHLLCCQSYIVVVFVFLWVGIWMGCEILHRSY* # ORIGINAL: g7719.t1 original gene structure, not modified by PASA NODE_5052_length_1049_cov_26.9302 AUGUSTUS gene 291 813 . - . ID=g7719;Name=g7719.t1 NODE_5052_length_1049_cov_26.9302 AUGUSTUS mRNA 291 813 . - . ID=g7719.t1;Parent=g7719;Name=g7719.t1 NODE_5052_length_1049_cov_26.9302 AUGUSTUS exon 676 813 . - . ID=g7719.t1.exon1;Parent=g7719.t1 NODE_5052_length_1049_cov_26.9302 AUGUSTUS CDS 676 813 . - 0 ID=cds.g7719.t1;Parent=g7719.t1 NODE_5052_length_1049_cov_26.9302 AUGUSTUS exon 291 397 . - . ID=g7719.t1.exon2;Parent=g7719.t1 NODE_5052_length_1049_cov_26.9302 AUGUSTUS CDS 291 397 . - 0 ID=cds.g7719.t1;Parent=g7719.t1 #PROT g7719.t1 g7719 MAFCNLYRANTHNTYLIRSAFIRSLFPDDVSSDDKKRPTTAGLKIKTQANALVDTLMKCTPHYIRCLKPNETKKAKDWEEK # PASA_UPDATE: g10103.t1, single gene model update, valid-1, status:[pasa:asmbl_5819,status:3], valid-1 NODE_3278_length_3846_cov_43.2262 . gene 1367 2487 . + . ID=g10103;Name=g10103.t1 NODE_3278_length_3846_cov_43.2262 . mRNA 1367 2487 . + . ID=g10103.t1;Parent=g10103;Name=g10103.t1 NODE_3278_length_3846_cov_43.2262 . five_prime_UTR 1367 1489 . + . ID=g10103.t1.utr5p1;Parent=g10103.t1 NODE_3278_length_3846_cov_43.2262 . exon 1367 2487 . + . ID=g10103.t1.exon1;Parent=g10103.t1 NODE_3278_length_3846_cov_43.2262 . CDS 1490 2212 . + 0 ID=cds.g10103.t1;Parent=g10103.t1 NODE_3278_length_3846_cov_43.2262 . three_prime_UTR 2213 2487 . + . ID=g10103.t1.utr3p1;Parent=g10103.t1 #PROT g10103.t1 g10103 MSRRREKCICLLCTCGKHHCPAPVHDAYKLEGAGSTYKTDFVPREIDYKPCKLPEQPRPDYAPFEDSTTTRSAYKRWEGGRRSEPIRPQPSQLMATPSDYVYQTTNSIDFSPKAVQVERRTRPVDYTASSEPMQKITTTGEHYRKPEVDYKLPSKRESKYSPSDAPFEGVTMYKADFYQKPIPTRSRRSEPLPDPFDDQYEQGRFNTEYNRVYTPKKSQRCPVGEMSPTEVTTRSKCVRS* # PASA_UPDATE: g10102.t1, single gene model update, valid-1, status:[pasa:asmbl_5818,status:12], valid-1 NODE_3278_length_3846_cov_43.2262 . gene 506 1097 . - . ID=g10102;Name=g10102.t1 NODE_3278_length_3846_cov_43.2262 . mRNA 506 1097 . - . ID=g10102.t1;Parent=g10102;Name=g10102.t1 NODE_3278_length_3846_cov_43.2262 . five_prime_UTR 1081 1097 . - . ID=g10102.t1.utr5p1;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . exon 1018 1097 . - . ID=g10102.t1.exon1;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . CDS 1018 1080 . - 0 ID=cds.g10102.t1;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . exon 776 882 . - . ID=g10102.t1.exon2;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . CDS 776 882 . - 0 ID=cds.g10102.t1;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . exon 506 674 . - . ID=g10102.t1.exon3;Parent=g10102.t1 NODE_3278_length_3846_cov_43.2262 . CDS 506 674 . - 1 ID=cds.g10102.t1;Parent=g10102.t1;3_prime_partial=true #PROT g10102.t1 g10102 MANFKHGDVVWADFHGWWPAVVLSSESLRPDVAKSLQSLAKKAKNGCHVIFLGSLSYGYVPCDPKKIRLYTPEIKEEMVKKVKTKGLSSDLLTAEDPVRIAALLKNLQNEVEK # PASA_UPDATE: g1031.t1, single gene model update, valid-1, status:[pasa:asmbl_8223,status:3], valid-1 NODE_567_length_21111_cov_42.1449 . gene 278 2392 . - . ID=g1031;Name=g1031.t1 NODE_567_length_21111_cov_42.1449 . mRNA 278 2392 . - . ID=g1031.t1;Parent=g1031;Name=g1031.t1 NODE_567_length_21111_cov_42.1449 . five_prime_UTR 2318 2392 . - . ID=g1031.t1.utr5p1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 2190 2392 . - . ID=g1031.t1.exon1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 2190 2317 . - 0 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 1833 1962 . - . ID=g1031.t1.exon2;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 1833 1962 . - 1 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 1499 1594 . - . ID=g1031.t1.exon3;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 1499 1594 . - 0 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 1067 1171 . - . ID=g1031.t1.exon4;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 1067 1171 . - 0 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 714 878 . - . ID=g1031.t1.exon5;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 714 878 . - 0 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . exon 278 565 . - . ID=g1031.t1.exon6;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . CDS 437 565 . - 0 ID=cds.g1031.t1;Parent=g1031.t1 NODE_567_length_21111_cov_42.1449 . three_prime_UTR 278 436 . - . ID=g1031.t1.utr3p1;Parent=g1031.t1 #PROT g1031.t1 g1031 MSIFTPTNQIRLTNVAVVRHKKTGKRFEIACYKNKVISWRDGVEKDIDEVLQSNTVFTNVSKGLAAKKEELIAAYGTDDQDKICIEILAKGELQVSDKERSHQLESMSKEIATIVVDMCVNPDTKRPYSVTMIEKAIKDMHYSIKPNRTAKQQALDVIRELKERIPIQRAQMRLFLTLPQKDARRIREKLVAHIAHIEKEEWSGDLEITCLIDPGTFRVIDETVRAESKGKGMVEVVNLKNTEEGDEKIE* # ORIGINAL: g1034.t1 original gene structure, not modified by PASA NODE_567_length_21111_cov_42.1449 AUGUSTUS gene 20063 20921 . - . ID=g1034;Name=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS mRNA 20063 20921 . - . ID=g1034.t1;Parent=g1034;Name=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 20749 20921 . - . ID=g1034.t1.exon1;Parent=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 20749 20921 . - 0 ID=cds.g1034.t1;Parent=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 20401 20538 . - . ID=g1034.t1.exon2;Parent=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 20401 20538 . - 1 ID=cds.g1034.t1;Parent=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 20063 20228 . - . ID=g1034.t1.exon3;Parent=g1034.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 20063 20228 . - 1 ID=cds.g1034.t1;Parent=g1034.t1 #PROT g1034.t1 g1034 MRKAGSSDLARYKVPTSLDVLRGKFGRKILLDVDGETIEDVAMMIHIQNNQHVGPALRAAPMARVDDGLFDLVLVRGMRKAAFAGMLGGMEDGTWVFHDRVEYRRFRTLTLRMSDNPSFANVDGHIVGTEPLTIEVVPSAVEIFGPYDTAGGVLASTH* # PASA_UPDATE: g1033.t1, single gene model update, valid-1, status:[pasa:asmbl_8224,status:3], valid-1 NODE_567_length_21111_cov_42.1449 . gene 16925 19324 . - . ID=g1033;Name=g1033.t1 NODE_567_length_21111_cov_42.1449 . mRNA 16925 19324 . - . ID=g1033.t1;Parent=g1033;Name=g1033.t1 NODE_567_length_21111_cov_42.1449 . five_prime_UTR 19182 19324 . - . ID=g1033.t1.utr5p1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 19001 19324 . - . ID=g1033.t1.exon1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 19001 19181 . - 0 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 18744 18863 . - . ID=g1033.t1.exon2;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 18744 18863 . - 2 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 18415 18566 . - . ID=g1033.t1.exon3;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 18415 18566 . - 2 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 17854 18075 . - . ID=g1033.t1.exon4;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 17854 18075 . - 0 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 17474 17641 . - . ID=g1033.t1.exon5;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 17474 17641 . - 0 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . exon 16925 17254 . - . ID=g1033.t1.exon6;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . CDS 17084 17254 . - 0 ID=cds.g1033.t1;Parent=g1033.t1 NODE_567_length_21111_cov_42.1449 . three_prime_UTR 16925 17083 . - . ID=g1033.t1.utr3p1;Parent=g1033.t1 #PROT g1033.t1 g1033 MSTNTRSRKRAREGETTDDVPPVKRPANAVGLYDPAPYTYEVKELIAKGKQTKPEPNPGTDPNRPVRVYADGIFDVFHAGHARMLMQAKLLFPNTHLIVGVCNDRLTHSLKGKTVLTEWERYEGVRHCRYVDEVLTDAPWTITKEFLDDNCIDFVAHDDIPYATADSEDCYKHIKEMGKFKATQRTDGISTSDIITRIVKDYDVYVRRNLARGYSAKDLNVGFVKGTKFQLEAIKDRVSRSVDKRRKIIGEKSQEMLGKWEDKSHELVKDFGDLFEKGAKILMSGRNKVLDKVDHIMHSFSPIGSRSPSPTSDGARESDESEDDKEANASFLVSTPL* # ORIGINAL: g1032.t1 original gene structure, not modified by PASA NODE_567_length_21111_cov_42.1449 AUGUSTUS gene 2867 16533 . + . ID=g1032;Name=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS mRNA 2867 16533 . + . ID=g1032.t1;Parent=g1032;Name=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 2867 2937 . + . ID=g1032.t1.exon1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 2867 2937 . + 0 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 3078 3214 . + . ID=g1032.t1.exon2;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 3078 3214 . + 1 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 3319 3428 . + . ID=g1032.t1.exon3;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 3319 3428 . + 2 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 3588 11906 . + . ID=g1032.t1.exon4;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 3588 11906 . + 0 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 12836 13160 . + . ID=g1032.t1.exon5;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 12836 13160 . + 0 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 13306 13975 . + . ID=g1032.t1.exon6;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 13306 13975 . + 2 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 14336 14367 . + . ID=g1032.t1.exon7;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 14336 14367 . + 1 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 14727 14784 . + . ID=g1032.t1.exon8;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 14727 14784 . + 2 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 15087 15192 . + . ID=g1032.t1.exon9;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 15087 15192 . + 1 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 15475 16271 . + . ID=g1032.t1.exon10;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 15475 16271 . + 0 ID=cds.g1032.t1;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS exon 16470 16533 . + . ID=g1032.t1.exon11;Parent=g1032.t1 NODE_567_length_21111_cov_42.1449 AUGUSTUS CDS 16470 16533 . + 1 ID=cds.g1032.t1;Parent=g1032.t1 #PROT g1032.t1 g1032 MADKILRAYDTLGVGNADVPPEERSKNEKEIPGAKKDKLAACQTLVELTCSQNMKNSTDFPKILSAAVSGLLRGFNDAESDVRMMADECLNKLVRNLMDMHLARIQVELYKEIKRPNAPSRSLRAALSKFGDLAHLVKPSKCKVFASSVLPALIKLADRPEEAVQETLAHACEKVAAAFGIFFAEADVALFFGCFVENLSSPTAVVRRTAATSIAAMCQYHVEPMSQVSTVCGMLVALTRRHGEALRESLAEAEAIKEAATEAARLAELEAEKAKEREKEREKERENGDIRVEDAGVSGKGEATEFACNSGEKEQNGGTLAPAAAPAAAPKQKPPKEAIAAHANAILGGMLCFRQLLSIPAIPNAKSAALSLRDVIVQPSSVVPLVELAVASLTHTNHNAVTASLETLQHLLKIVDAELCLACFGGEDGVDRCIASLLSLALPTSATGRVSVKSLVCACAASLVSHFPSHFAREFATTSGEGCIADLLSFAKHADPLLRGNAALVAGAALHSLLVAAKYDAETLPRLHLHASATAAGAMTEDVDAPAGTVGTIHTLSELIVALLSDDSSTTRRIAAMAAGMVVSPLLVTQLPQYALNILRRLLELHADPYWLVRTAVLDVIATTDHADLAAAQASSPNQHFPGGCDLRVGCVDFAIQMLGDEDSRVRDRAADVLVALVPLLHPESDWPHSGDAITALAARRSARWFEQTANRELDPTDANLSRALRSVVSLLHNAPSRHAVTGCYLALVRLIDAYGAPWPSAVVALKTRSDSLSLPSMGECSGEVIPLALDHVTSAWVGLDVATHADALKAIAGIFRSADVEDIRPFCPRLLVHTFRVLSMAHHIVGETNPPPPTQQREVPKDTRAHKDSPKHGDRGGGLDGESLAAEIGGNGPVGEFMHLPHYAKMYEAVTGTFASTRLNLTLSAHDKFSVLIHGALDCASVVLTAAGPSAAPYAEEFLTYMRTLMRNDPQTVLACVNDLLWSLFGAETHRHRPIPIPLGPDAFLAPVSVPQPRPTDEGDGFGERAFPRMLAVDLVQATGLAGDSTKGAPRHTMAMPTRVRATSWRAKPRAPSQQHASAASAAAAAADASSASSLTRKSSISASSPLAKAFEKGAAVEKADKGAMQLLVRLFEPLVIRAMNLYCNTSVVGLQRGVLFLLAQLVMLRVNYTLLDSDNMFLTFLAKQVESIAAGAVVAGHELLPFLFEFFLLLARDQQSLPPEAMNVPKIVDLANSLLSSTSISCDRVIPALLPIAIELLGAPQHGGRGRREPAADAALSTQREALAAMLCSHLGRPAAVDVLVRSLRAARGHPERWGTLSKHVSETLVPAMAGHAVPANGDRVLDAVFALADAISPGSVRPEPKLFGSLFEMEASPLYGRAPSASAFEWVASAILLLRFAAKFPEDAVASAVVQLGDACVGHASATDALFVRVFDLVRASAANLAADRAPCKAKIRQFGELLLHASGAVLASRRARSRRLFTSASAFLAANATAVGETHALVSTLASGHPSVVLFWLHLLCVAGYTDGRFWMTASGILSSSVDHTELSHGLRVVRRGAFVLWSRAVQAERESALAAGVAVATETPATSSRFARAVVRAWEESAIQRIASRLVANDRARDVLVAWIGSQGVRGGAHALGPSGGLRCVSVLMKMPPSPVVAVAAIRGILPTHHLAVRRAAAKCIAAVVDAVAGSPLEVMDIRGVSSRGTPGITVVVEEAEAGGVDDDEVGALRAQRRETDLSTIVRELECAEIDVVRLPELYASLKRARATEDDAPLVSRGIVALSAQSVRVDAKFYADLLMSIARGRRASAENAQSSSFAHLLAHANDATFADVVSLPSLCNELLPSVVTSLKRRAQSRLPKEAPTAPTTPRVPRPRAAAPDAANATTTASSQTASTVSTASVVAGESQAADKDATLLDTRPSMDSGVADSDEVPVVALPDASLSSIVLTDQQQQEQQQQQQQASDQEAAREHDGFTAESVAVASLVFSRARGLLVDAPSSTPQANSDADADCPEWCDWDAGLHVLEALADVVACMYDDTQLASGLPLMPEPTDDQLALAARFAVAGLSAAAYRVRTQEALPADLCAVVVAVSSLLAFEKVSRHMADPAQGRTLAWAVVSLHAIHESVLHGVACDGRIAPPTSNLPDGRLHVDQQRMLTALVVDCSGVLHVQPRMVDAVGRRIHRPHRHVPQSFAALLRSLAIRIARIDTSLVHTYAVVHGKKKSEMDDGGPPPADFGGDGLPRTLLETDHLQDVDILASFLQRVGLLGYEDQHRFEELWAALLSVIGATVPAESTPSAYEPEDVRATCLAVRGMTHILLQSLLKPKAGDTLGFYPATNRPLPPKSSRTMVRARAVLAAEKITAQMGVIGGPKQHNVELALAVYTGNIETSVWGAPTGPFPVASYRLFRAPLSAAHSLTSPPNPQPATQQAAGHVRGAVYLRNMIELFGHRLESTLGRSLLVLQETLRATNVLSDIFTMRAHFEWMLQSIGHIFRQHPQEDVLLQAHILLGLCKAAAFIWVGGTGGPMPMYAPSPVELVRSLDEALGSPSPSLQCAALRCVQYLCDARVDAVMVTLMPALHAHLLALTQPSTAAQGHPLRCVSAISCAANLVCNYRRECDDQGDFTRRILKALATLASDDGGAETISRAAMQALERLSAFGCVPASLCDAVCAVAADRIFALSLGRCFKAIGLMVTSVYAIRHAEMLARGDAPPDEEDDDIPMGPSPSLQTMEAVSTLFDRMRRGFYRESRAIVAALGPLLGSHFPAQQIMSIVMGEFLSSQQTHPELLAALVHDVFSRVRAVHGGQETLREWVLLSLKSFTQKEPRSVAAWSLACLFTSASRNPLLRALHHPLQQKRGLVTPADCRLLVTSALDFFHNQPRPAPLRPANPPMFYGSTNEYRNVVLERSENGFDFCVKGGKEHKFPVVISRVFPNGSADRSGVVHVGDELVEVNGVNVCEMTHDNVVDLIRRATDKCELKLRSNTVIQKYFRDAAGTDIEATPPPVISNTTNARRPTMEVTTRTSDALRMDSVAESSSAWRPVSTAIPSTATNDAATTIAAPTVATPPIIATPPAIVTPAIAGPSQPPSVAVGAGVGTVVAQTSTSSPQVRFSNTLGAAPIAGVSSAGATSGATSSVSATANVSASVVGATAAGIASVSQRPAVSSTTKQIDTIVGSLSPSRPTPDDASLGPLPPGWEVAMDPSSKRLFFIEAADLSDCEVHELPFGWEEQKDMTGYLFYIDHINRRTTWHHPQEMREWDQRMDIRKIISKTTDAIELKKSSLMSLTDQTKPARMDALRTLFQRRKELMQAWKQTSFESGQRQAVAADISAVNTEVLRTFAVGAAKDTAGDIRFELADLNECLDGFVRIELSSPHFHEGTLTEDWWAFQVQAKRQVLALLQTAVRSHAAERERRDALVAEIGVLRRVLGVAPLRGEEGPACSLGITSTERIVKGTATELGVETLLLNKEIADMRREYAVLGMLKDNLNLAIECQSLAGGHGDVLETPEWMQWQDWFYRWHDLVSRRSFARISAHDADETESFRKKIMKFAAIDAAELSDAWRR* # PASA_UPDATE: g6320.t1, single gene model update, valid-1, status:[pasa:asmbl_864,status:3], valid-1 NODE_1225_length_12912_cov_95.4397 . gene 2425 7560 . + . ID=g6320;Name=g6320.t1 NODE_1225_length_12912_cov_95.4397 . mRNA 2425 7560 . + . ID=g6320.t1;Parent=g6320;Name=g6320.t1 NODE_1225_length_12912_cov_95.4397 . five_prime_UTR 2425 2673 . + . ID=g6320.t1.utr5p1;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . exon 2425 3051 . + . ID=g6320.t1.exon1;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . CDS 2674 3051 . + 0 ID=cds.g6320.t1;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . exon 3399 3796 . + . ID=g6320.t1.exon2;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . CDS 3399 3796 . + 0 ID=cds.g6320.t1;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . exon 3950 7560 . + . ID=g6320.t1.exon3;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . CDS 3950 7061 . + 1 ID=cds.g6320.t1;Parent=g6320.t1 NODE_1225_length_12912_cov_95.4397 . three_prime_UTR 7062 7560 . + . ID=g6320.t1.utr3p1;Parent=g6320.t1 #PROT g6320.t1 g6320 MDAPPSKTRRVLTFPGVTFSHASSPATSRAVGHTSGTNANGAVQSHATPSSRDAKDSTAAPSASTATLVPVQAARLPPRVAVDNADSRVDKALRVRLYLLRLPGPNSFIVCSDATESTHTVHLGPQTCTCGRDYCVHLLFVLLRVLMVPRNSPVLWSKPLKDYETEALMTAYYGRRTAIIYGKRHASRNMLLDHAGGNNHQHASRVTEGVASASASGTDVDAEWEFAPKSEEDVPCPICLLDLLEGETITWCRKGCGNRYHSYCMSIWADERTKQAKKVYCPLCRADWKQHNTHTHAHAHAQYAGPASGALKHHDSTAVVLSSSAASAFTPTTSSSTCLSSSTSQASGSVLSDARVTAERVASLMTLTIAGTDGPDSGYTSLVSSPSIVSPSPHTSGNADSNANGGATILITTTPLSAMAGDDPNGPEGVTTRTETNLGQTVGTVTSAAGASVSVSLSMSVSVSVAPGPATVPLSVALGAPLVAQLGSRNWITRETALKSLTVVVTTAISACDASVVQRSLDGATAETLPSHAILEAVCECVATAIADPVARVHQSAVAAVSNILAAEDMPFGVQPSNAKRALASLLDAVTTRVSDANKRIGASSLSLACRLALDPRWGPSTVVPLVLSLSNTVASNDKQRPWRWWHGRLLLSLNILEQSPSALIDSRRGDPVIKHVIPFALAALSIRHARVNRRAVDLIVECCAIAEQVPALLPTAKAAVAQLQPAMSRSVAFRLAHRRKRRTSIKSKPSSPRKTPNPSGSHDAPSSSTFASNLKDGYFEAVSPAEDEGNRYGNGDDAENKNYGVTCAEKMRAEEEELDMERSRGLEDEHASGQLLEGLDAAIAKIHLEKDVISDVYPCVPAALFPEGTFYTVKQRLGRGGNASVHLALDASGRKFALKRIDGACATALERDSALRSATREAAILRTLRHPGIVGCLGGVYEASGDGDSERVSLCSRVHAYKVDIFLELMAGGTLSNLLSRAGSLPLGRVRDYTRQILAATAHMHARGIIHRDLKCANILLSADLAVAKITDFGSSSRMSGCMTMTGEFTAGHFGTVAFMAPEVIRGESHGRACDVWSLGCTVLHMVSGRIPWSDADENANNNNNNNRRIDNDKDDGNAPRQQNNFTLMYRIASGNNLPAFPEICHPSAVDFMSRCIVRDPRQREHAQALLFHPFLEEDSDEGIRGKDVARAVAAANGVINDVDLDAATAANEVDVDAATAADDVDVDATTTANDVDVNAMDDVDIVLSYDDAAADDAIVAGCNHVAVADDPAEYDSDVGSELSDDSTNDNNDC* # ORIGINAL: g6322.t1 original gene structure, not modified by PASA NODE_1225_length_12912_cov_95.4397 AUGUSTUS gene 11372 12557 . + . ID=g6322;Name=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS mRNA 11372 12557 . + . ID=g6322.t1;Parent=g6322;Name=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 11372 11574 . + . ID=g6322.t1.exon1;Parent=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 11372 11574 . + 0 ID=cds.g6322.t1;Parent=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 12041 12230 . + . ID=g6322.t1.exon2;Parent=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 12041 12230 . + 1 ID=cds.g6322.t1;Parent=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 12447 12557 . + . ID=g6322.t1.exon3;Parent=g6322.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 12447 12557 . + 0 ID=cds.g6322.t1;Parent=g6322.t1 #PROT g6322.t1 g6322 MNLYGLDGQPRIGLRGKRSPSRLTETTFDLNLEKEEMKMRAKQRARDNTHSPLQRVYYGSDGDKRASIESHRIALEEQMAERDRLAAAEKERTLELEKSLLESDDAAAYDIYNGHVVRRDFAKLCLDTNQTIAEEKRNRAQLDRELEQERDRKVMVINPINWSGSLH* # ORIGINAL: g6321.t1 original gene structure, not modified by PASA NODE_1225_length_12912_cov_95.4397 AUGUSTUS gene 7940 10799 . - . ID=g6321;Name=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS mRNA 7940 10799 . - . ID=g6321.t1;Parent=g6321;Name=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 10688 10799 . - . ID=g6321.t1.exon1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 10688 10799 . - 0 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 10320 10463 . - . ID=g6321.t1.exon2;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 10320 10463 . - 2 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 10031 10122 . - . ID=g6321.t1.exon3;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 10031 10122 . - 2 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 9624 9775 . - . ID=g6321.t1.exon4;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 9624 9775 . - 0 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 9103 9305 . - . ID=g6321.t1.exon5;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 9103 9305 . - 1 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 8767 8910 . - . ID=g6321.t1.exon6;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 8767 8910 . - 2 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 8303 8368 . - . ID=g6321.t1.exon7;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 8303 8368 . - 2 ID=cds.g6321.t1;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS exon 7940 8109 . - . ID=g6321.t1.exon8;Parent=g6321.t1 NODE_1225_length_12912_cov_95.4397 AUGUSTUS CDS 7940 8109 . - 2 ID=cds.g6321.t1;Parent=g6321.t1 #PROT g6321.t1 g6321 MQCPTCLKLKLPNTYFCSQDCFKSNWATHKAVHTAVAAGTPSSSGPPAGYNPFPGYSFTGSIRPWPYGSARTVPPGIGRPEYAESSIPVNEQKAKQVHTIEALTPDRIEKMRTVCRLTREVLDLAIAIVKPGVTCDEIDRVVHEACIERNAYPSPLNYYKFPRSCCTSVNEVICHGIPDLRPLQDGDIVNIDVSLFHNGVHGDLNETVFVGKVDEAGRHLVKTAWECMDKAIQMVKPGMLYRDIGNVIQKHATANKVSVVRSYCGHGVNELFHCAPNVPHYGKNKAIGVMKPGHVFTIEPMINEGGFMDETWPDDWTSVTRDGKRSAQFEHTMVVTETGVEVLTLRRDHNGLPHFMTQAQ* # PASA_UPDATE: g2909.t1, single gene model update, valid-1, status:[pasa:asmbl_7200,status:12], valid-1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . gene 42 1497 . - . ID=g2909;Name=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . mRNA 42 1497 . - . ID=g2909.t1;Parent=g2909;Name=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . five_prime_UTR 1497 1497 . - . ID=g2909.t1.utr5p1;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . exon 1312 1497 . - . ID=g2909.t1.exon1;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . CDS 1312 1496 . - 0 ID=cds.g2909.t1;Parent=g2909.t1;5_prime_partial=true NODE_4297_length_1857_cov_33.2368_potentialcontaminant . exon 913 1074 . - . ID=g2909.t1.exon2;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . CDS 913 1074 . - 1 ID=cds.g2909.t1;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . exon 42 735 . - . ID=g2909.t1.exon3;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . CDS 213 735 . - 1 ID=cds.g2909.t1;Parent=g2909.t1 NODE_4297_length_1857_cov_33.2368_potentialcontaminant . three_prime_UTR 42 212 . - . ID=g2909.t1.utr3p1;Parent=g2909.t1 #PROT g2909.t1 g2909 VNHFAQEFKRNHKNDISTNKRALAKLRVACETAKRTLSSSAVAHCSIESLAEGVDFNSNVNRSRFDMMAGEIFRQLADPIDKALAAASLTADDITDVILAGGASKIPKVKTIVADRLPKAEIGSRIQPDEYFSIGAAYEAGLLVETDEPEENEAINTAPCVSADILVQVDGGEFVTMIGAHTPVPAKAERLFSVPEGAEGVVIRVYEAQGDSKKHIVDLALKHAHHHAAVPKDKKDKKDDGKPALQGDVVVHCDVSKEGHFRVSATERKTGAHARAVAKGHHGHSAGGH* # PASA_UPDATE: g855.t1, single gene model update, valid-1, status:[pasa:asmbl_3259,status:12], valid-1 NODE_2006_length_8129_cov_48.0002 . gene 3350 6089 . + . ID=g855;Name=g855.t1 NODE_2006_length_8129_cov_48.0002 . mRNA 3350 6089 . + . ID=g855.t1;Parent=g855;Name=g855.t1 NODE_2006_length_8129_cov_48.0002 . exon 3350 6089 . + . ID=g855.t1.exon1;Parent=g855.t1 NODE_2006_length_8129_cov_48.0002 . CDS 3350 5947 . + 0 ID=cds.g855.t1;Parent=g855.t1 NODE_2006_length_8129_cov_48.0002 . three_prime_UTR 5948 6089 . + . ID=g855.t1.utr3p1;Parent=g855.t1 #PROT g855.t1 g855 MRLHRVAIARALLVAGLLLLQWSACVCNAADQDDGCSLGKYRKPNFGPNVCFLCPSGMFCVKEVLSPCPENTYNPELGASECRYLCADHSTSPKGSVFSSDCTCDNGYVRIAAPPPIRPFDPGFSCLPDVPPSKGVNIVKVAIGCCALSASWLLNNDRDAIFEIGNITVPLDLASIRIEAILYLGDIALDDVTLRKPAGKIDGTFLNGSSATFAGLSPLTLYTLHYRVYSSRNVWSLPTVAKHFRTLPAACSLPVPVSVSIETAAANDAGCPAGTYIGGCESGVVACVLCPAGTFGPAANALVETACRICPPGTYSHAGAVNCSAMTLNSNDCSSALAGSVTSAPVCWASPDPRSAFYHIPGIPTSRSSDVAPALEDGDAKNAADDNNIGVAQAKIALPAIYGGVLLFAACVLLVLIYAWGPMRRLALAADILYRLPDRDVHVTESLGVPEKVPSLIRSSLSVVAFLAIVVVWAYATHDFVRNRYVEERTVVTLSNLGIHAYESVTAPRIYIAALGTPLACDTLVGSVRPLTQNIFDGSNEPSKLSVYTVTECVTVGEENDFLVSPDKSADGNLFADGDMANCMRMAMAAGSPRCLRVRMDPVASFHIASTLSLLVGLSHVDGAAGPWPYAQTLRVRLESPSWLTGATSWASVSIPLGPSIASRVQQPLETLPPGFGVSAFAAFLVSRALLITPSAVHTGYELTIVGPASHIPDPIAAGTYNASAGNAMSMPTPAALGMVVALNLAPTVVQIRQLEVISPADLATRLISYAAAVISAIGVCVGLSMRFAQWRSSRRRTTDLVSENTRVGSRSGPPTPGKTHATAVGATLCSYVRRDSWTLMGSGAAAETGSVHEPLLVSEAEETP* # PASA_UPDATE: g854.t1, single gene model update, valid-1, status:[pasa:asmbl_3260,status:3], valid-1 NODE_2006_length_8129_cov_48.0002 . gene 1526 3071 . + . ID=g854;Name=g854.t1 NODE_2006_length_8129_cov_48.0002 . mRNA 1526 3071 . + . ID=g854.t1;Parent=g854;Name=g854.t1 NODE_2006_length_8129_cov_48.0002 . five_prime_UTR 1526 1609 . + . ID=g854.t1.utr5p1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . five_prime_UTR 1702 1767 . + . ID=g854.t1.utr5p2;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 1526 1609 . + . ID=g854.t1.exon1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 1702 1956 . + . ID=g854.t1.exon2;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . CDS 1768 1956 . + 0 ID=cds.g854.t1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 2164 2325 . + . ID=g854.t1.exon3;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . CDS 2164 2325 . + 0 ID=cds.g854.t1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 2493 2516 . + . ID=g854.t1.exon4;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . CDS 2493 2516 . + 0 ID=cds.g854.t1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 2615 2669 . + . ID=g854.t1.exon5;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . CDS 2615 2669 . + 0 ID=cds.g854.t1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . exon 2798 3071 . + . ID=g854.t1.exon6;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . CDS 2798 3054 . + 2 ID=cds.g854.t1;Parent=g854.t1 NODE_2006_length_8129_cov_48.0002 . three_prime_UTR 3055 3071 . + . ID=g854.t1.utr3p1;Parent=g854.t1 #PROT g854.t1 g854 MDGYDDGRGDYVDGDGYNEEHQEYYDEDQEPHSQPQPKYRIRGTAPRGEYPGHYVPAYAASPQRGGQTYRQTPSRQHPVHNVTLAGLIKHQTPSTVGTAGTAGHRRRQSLPETPWSKIYNGTLSKSVGVLSGRSTVFDRLSDPNSYTGVYRQRFLTGSGTLNGAASDGIVRDLSQIVRAESRGSTFVRHNGNAWEFTGTSGNVQDTPAQRMCTDSTVYRAPVKHAYIL* # ORIGINAL: g856.t1 original gene structure, not modified by PASA NODE_2006_length_8129_cov_48.0002 AUGUSTUS gene 6926 8025 . + . ID=g856;Name=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS mRNA 6926 8025 . + . ID=g856.t1;Parent=g856;Name=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 6926 7347 . + . ID=g856.t1.exon1;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 6926 7347 . + 0 ID=cds.g856.t1;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 7466 7586 . + . ID=g856.t1.exon2;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 7466 7586 . + 1 ID=cds.g856.t1;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 7711 7926 . + . ID=g856.t1.exon3;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 7711 7926 . + 0 ID=cds.g856.t1;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 8011 8025 . + . ID=g856.t1.exon4;Parent=g856.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 8011 8025 . + 0 ID=cds.g856.t1;Parent=g856.t1 #PROT g856.t1 g856 MATGSLRSVCAFDASGDCLALVGVDGALRVWDTVSGSVRQEHTRGATLLADPYTSVSFSPAPITQKKKKGSTSSIPEHAALGTQQGSVIVLDLVHGKQTVFETKAHVGRVNAVAWLNESEFFTAGDDKQIVHWSTAGQIIGKWKADKHGVSALAVSKDRTKVLSAGRTIKLWDVATRKCVKKYTGHENPIVGLAFASSGNLFVSASLDDRLVAVWSADDSEADGSGDERTALAFMALDSGATAVAVDSDASGKPFSN* # ORIGINAL: g853.t1 original gene structure, not modified by PASA NODE_2006_length_8129_cov_48.0002 AUGUSTUS gene 13 975 . - . ID=g853;Name=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS mRNA 13 975 . - . ID=g853.t1;Parent=g853;Name=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 841 975 . - . ID=g853.t1.exon1;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 841 975 . - 0 ID=cds.g853.t1;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 599 753 . - . ID=g853.t1.exon2;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 599 753 . - 0 ID=cds.g853.t1;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 235 500 . - . ID=g853.t1.exon3;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 235 500 . - 1 ID=cds.g853.t1;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS exon 13 130 . - . ID=g853.t1.exon4;Parent=g853.t1 NODE_2006_length_8129_cov_48.0002 AUGUSTUS CDS 13 130 . - 2 ID=cds.g853.t1;Parent=g853.t1 #PROT g853.t1 g853 MAGSADSKYASGRSPAAMKKDGFEAASLKPDVDMEDLTKPVPTIEDKWKLLPAFLKVKGLVKQHIDSFNYFVNVEIKKIVKANQKVASDADPTFYLKYRDIHVGIPNAEDFNISQKVSPQECRLRDMTYAAPITVDIEYTRGNQRVIRDAVPIGRMPIMLRSSNCVLSNKSQAELATLGECPIDPGGYFIVKGVEKVILIQEQLSKNRMIIEIDRKGLPGASVT # ORIGINAL: g10717.t1 original gene structure, not modified by PASA NODE_1221_length_12924_cov_42.1626 AUGUSTUS gene 8593 12486 . - . ID=g10717;Name=g10717.t1 NODE_1221_length_12924_cov_42.1626 AUGUSTUS mRNA 8593 12486 . - . ID=g10717.t1;Parent=g10717;Name=g10717.t1 NODE_1221_length_12924_cov_42.1626 AUGUSTUS exon 12056 12486 . - . ID=g10717.t1.exon1;Parent=g10717.t1 NODE_1221_length_12924_cov_42.1626 AUGUSTUS CDS 12056 12486 . - 0 ID=cds.g10717.t1;Parent=g10717.t1 NODE_1221_length_12924_cov_42.1626 AUGUSTUS exon 8593 11710 . - . ID=g10717.t1.exon2;Parent=g10717.t1 NODE_1221_length_12924_cov_42.1626 AUGUSTUS CDS 8593 11710 . - 1 ID=cds.g10717.t1;Parent=g10717.t1 #PROT g10717.t1 g10717 MLDKSAAWLENLGTRPKSELSMKTRASPCNINGMTSSESTKGSNGVGRRRRRLVILTLLGFFGLTFTLSVLWKRLPAYSANPDSASVALPDSLIDGNGSPAQWSDLPPDLMSGLALASNNGRPHAAAGQNPQYTTSIHPAGTGSSAPSASPSSPATSTASPSIDSVLMLHWTPWCLQYSSGPFGPMQTTRKCPISMPQSGVPNQPSSAETFTCSATVDRARLREASLVLFHVPEVTTFKPEDYPSERYPHQQWLCYSMESPSKTRPQLATASFMSMFNASSTYRVDSDFPIPYGPPSAEAILNAPFVPLSERNSDVPVAFIASYCDSPNGRTAYVAELMRHIGVASYGKCLNNRPGGISARDHIDRADTDRKVSHHKFMLVFENGHCGQYITNQLANALIAGVVPVVWGPEDHSDYERWAPAEGAFIFAGDFASPRDLAAYLNMLNGNDALLLPFLRYRLASRILNPSFGAPTYPLNDFCGMCNAARRAAAQLPASITGRTTPPPDLSCNTTETAMNDKLRPARMGIETVPLTPFALCFNASYSHLGADTSDIAIARAIFRTAPRGAPLAMYFAGGVVATADNARLIANAILREGVALQSSPQSKRIWLSTPLNWAEEDSSDSQWVVALQSFRHLQPLLHAFAVSPDDTVPQYLPVVRHALFDWYNFHVRRATPGKSEHAWQPSVAGIRAFYLAFVIDTMRRRPVHLAYVVTQEMIDLLDLARACVEALRRILNDKVAATIASLPALLGVAALARALPEIDGSDNDYQRASKGFRDVMEASNSVQVGDDAQSQQTELEAVYATNVFSGDKEVTALMTQLRGRIGSIATSHLPALKVDNATAKLIYAAGFNRVVNESVFMDHAAGAQRVQRIANESAGYYTGRWLNNTDHRAPRFIDRPTGVARELLRTAFNGTWIHFSGCSTTRFLFGAMVRLLSNALGARVPQIYEKEMDVCWQEYARNCTLFKNVTYYHTLLCQCRTASAAVPITVAVDDVEYAAVSRKEAVELLRSNRVMSALVNYSDHVCDAQSSPQCRLGMDPSTTPIRRGAVSVLLTYRWKETSFDEPIDRDLIGTLMREVGMDRPPDVLAVNAGIHAFHVYKGPNTPFLDDGLVPPEEIEKYFAGLVRFVDALHSGPSDLADQVTGKAADPPPPPSSLHHENARSVDLWGHMPDVEGRKRSRPAR* # PASA_UPDATE: g10716.t1, single gene model update, valid-1, status:[pasa:asmbl_854,status:12],[pasa:asmbl_855,status:12], valid-1 NODE_1221_length_12924_cov_42.1626 . gene 190 7045 . + . ID=g10716;Name=g10716.t1 NODE_1221_length_12924_cov_42.1626 . mRNA 190 7045 . + . ID=g10716.t1;Parent=g10716;Name=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 190 296 . + . ID=g10716.t1.exon1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 190 296 . + 0 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 591 741 . + . ID=g10716.t1.exon2;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 591 741 . + 1 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 1071 1141 . + . ID=g10716.t1.exon3;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 1071 1141 . + 0 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 1556 1596 . + . ID=g10716.t1.exon4;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 1556 1596 . + 1 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 1913 2103 . + . ID=g10716.t1.exon5;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 1913 2103 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 2329 3149 . + . ID=g10716.t1.exon6;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 2329 3149 . + 0 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 3279 3367 . + . ID=g10716.t1.exon7;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 3279 3367 . + 1 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 3580 3657 . + . ID=g10716.t1.exon8;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 3580 3657 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 3944 4060 . + . ID=g10716.t1.exon9;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 3944 4060 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 4376 4882 . + . ID=g10716.t1.exon10;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 4376 4882 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 5111 5219 . + . ID=g10716.t1.exon11;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 5111 5219 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 5475 5573 . + . ID=g10716.t1.exon12;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 5475 5573 . + 1 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 5727 5848 . + . ID=g10716.t1.exon13;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 5727 5848 . + 1 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 6192 6319 . + . ID=g10716.t1.exon14;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 6192 6319 . + 2 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . exon 6518 7045 . + . ID=g10716.t1.exon15;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . CDS 6518 6655 . + 0 ID=cds.g10716.t1;Parent=g10716.t1 NODE_1221_length_12924_cov_42.1626 . three_prime_UTR 6656 7045 . + . ID=g10716.t1.utr3p1;Parent=g10716.t1 #PROT g10716.t1 g10716 MFLPIASLLAADVQNPTSVICVMEDRILAIDLVSKGLPLFSLPYGLELHRAGVTALETYMDCPTEFIADLAALGKKQSESHFHSPRPWPVFGGVPPKSVPSPQDSLLVTGHEDGTLRFWDCSCASLDLLYSFSVGTLLAASSQSIQGLIAVRCIRLCVYSRRLTIALGNGDVLVFGFSVTHKEAPWKTCVISRRVRNDKVLKQQASKDSLRDARATALSPPPSAAPVGQSAQPFSAPASAPTPATTDPAAAARLERIGALKRLGFSEEWCVKAIGSTSGTMNEAAAWLFANAKTLEEEELDKQASDADQTKGRESAPPSMKTVTAAVAAVVATTPVGSPSLTRASTLPNKSPALTLSPTPARKEQQQPSASASQPDALRGGQSSSAAPPSSTPPRAMSPSGNAPDVSADKEKDQPSAPPVERVYSFHPGFFPICHVISYEWNTDLRVGKISALAAHSALGLVAIADAAGFIVVDVNAHKCILCLSHFDFPSRELCTESATDKVMCLSFNQIFARDEDLTDSQVLLVGSANGGFFVYTISESMSPVAGASSYRLDQAICFYFQNPSPILAIDILDKCGSPLKAATALWDNDDGNSPNDDTVAAGMKAAAAIAMPNTQRQDGCNAANVGPSICIIAEEDGDASGDVPPPPQPSPAVGSNLAAMSALSGSNVSLSAAVKKASGEHQFAVVTCAHNVRVVVLPGEDRLHKIEVDDGGTIVKSGLIDIGDESCLGCITNTGRFLVYGLLNLRPLLDGPCCDENWFGCLNRSSISRNGRVVLAAPWSQLQRVAVLEDDSHADVDYDACKVFLSKQMPPKPSGGLLRGMFGGASALDREELFGIPDPGANDIFARKREERASGNTERVAAEAGSIKGTLQHAQDALKERGEKLGQLENKSEAMRADAEDWVNKLKEHNRKQAAKKWYEL* # ORIGINAL: g1572.t1 original gene structure, not modified by PASA NODE_4898_length_1154_cov_41.9944 AUGUSTUS gene 1 1086 . - . ID=g1572;Name=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS mRNA 1 1086 . - . ID=g1572.t1;Parent=g1572;Name=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS exon 1016 1086 . - . ID=g1572.t1.exon1;Parent=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS CDS 1016 1086 . - 0 ID=cds.g1572.t1;Parent=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS exon 463 632 . - . ID=g1572.t1.exon2;Parent=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS CDS 463 632 . - 1 ID=cds.g1572.t1;Parent=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS exon 1 84 . - . ID=g1572.t1.exon3;Parent=g1572.t1 NODE_4898_length_1154_cov_41.9944 AUGUSTUS CDS 1 84 . - 2 ID=cds.g1572.t1;Parent=g1572.t1 #PROT g1572.t1 g1572 MAAVAGGKMYVYGGTSGVLTDELWTLDLSSFVWSQLSSTGATPPLMRSGALVAGNGTTLYLFGGQNSLAEYQNRLYSLNTVSMRWTVLTPSDTYGVNPKGVAQLGAAF # PASA_UPDATE: g8452.t1, single gene model update, valid-1, status:[pasa:asmbl_3045,status:12], valid-1 NODE_1932_length_8480_cov_39.4055 . gene 204 2412 . - . ID=g8452;Name=g8452.t1 NODE_1932_length_8480_cov_39.4055 . mRNA 204 2412 . - . ID=g8452.t1;Parent=g8452;Name=g8452.t1 NODE_1932_length_8480_cov_39.4055 . five_prime_UTR 2325 2412 . - . ID=g8452.t1.utr5p1;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . exon 2214 2412 . - . ID=g8452.t1.exon1;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . CDS 2214 2324 . - 0 ID=cds.g8452.t1;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . exon 1122 1984 . - . ID=g8452.t1.exon2;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . CDS 1122 1984 . - 0 ID=cds.g8452.t1;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . exon 598 699 . - . ID=g8452.t1.exon3;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . CDS 598 699 . - 1 ID=cds.g8452.t1;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . exon 204 340 . - . ID=g8452.t1.exon4;Parent=g8452.t1 NODE_1932_length_8480_cov_39.4055 . CDS 204 340 . - 1 ID=cds.g8452.t1;Parent=g8452.t1;3_prime_partial=true #PROT g8452.t1 g8452 MDSEQEKKVKALRKKVRQIEALLEKDDAALTKEEKSKIAKLPEFRGDLAAIDPTFSLESATQPAQPKQQHVAPASAPASKSTPMPTVAVAPTPAIASAPAPGKQKETSLGLVAASSPPTEGEWSVVAKGPKGDTGDASSASSAAKKKKKKASKGTGGAGSQVDQAEEAEAAPVASVQASAPAKPADDRAANEKEREAAAKREKETSLKKEKEAAEKSKRDGEERVRREKEAMDKAARDAEERARKEKEAAEKARRDAEERARKEKEAAEKAAREAAERARKEFIAAQDVSARPWFAEAFSHVALSGITGNVTSAAIVGGAVCIGSTDSTVKVFEADGTLRFSSGGHTDKITCVAIHGDSVVSGSDDCSVRMWDITRGKCTANFYAYAPVTCVACHDGKVACGTS # PASA_UPDATE: g8454.t1, single gene model update, valid-1, status:[pasa:asmbl_3046,status:12],[pasa:asmbl_3047,status:12], valid-1 NODE_1932_length_8480_cov_39.4055 . gene 6075 8320 . - . ID=g8454;Name=g8454.t1 NODE_1932_length_8480_cov_39.4055 . mRNA 6075 8320 . - . ID=g8454.t1;Parent=g8454;Name=g8454.t1 NODE_1932_length_8480_cov_39.4055 . five_prime_UTR 8288 8320 . - . ID=g8454.t1.utr5p1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 8242 8320 . - . ID=g8454.t1.exon1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 8242 8287 . - 0 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 7828 7945 . - . ID=g8454.t1.exon2;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 7828 7945 . - 2 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 7404 7515 . - . ID=g8454.t1.exon3;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 7404 7515 . - 1 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 6883 7001 . - . ID=g8454.t1.exon4;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 6883 7001 . - 0 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 6566 6595 . - . ID=g8454.t1.exon5;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 6566 6595 . - 1 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . exon 6075 6429 . - . ID=g8454.t1.exon6;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . CDS 6231 6429 . - 1 ID=cds.g8454.t1;Parent=g8454.t1 NODE_1932_length_8480_cov_39.4055 . three_prime_UTR 6075 6230 . - . ID=g8454.t1.utr3p1;Parent=g8454.t1 #PROT g8454.t1 g8454 MVTVAGLSSFKFLSGMFEERALFIRERSSGTYRVSSYFVTLWLTEFPFSVISLTLFSLIVYFGVGLNLSAGRFFYFVIIMILTQEVGLAFAQTFAGLSSTFEGATALCSITLTLYMLMSGYLINLDNIPNYWIWAYYTNFMAYALNGLIVNEFSGQVYGGVPGSVVIDDRGADVVSQGANVAILCGLMAAFRSFAYLGMRFVRHDQR* # ORIGINAL: g8453.t1 original gene structure, not modified by PASA NODE_1932_length_8480_cov_39.4055 AUGUSTUS gene 3161 5437 . + . ID=g8453;Name=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS mRNA 3161 5437 . + . ID=g8453.t1;Parent=g8453;Name=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS exon 3161 3631 . + . ID=g8453.t1.exon1;Parent=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS CDS 3161 3631 . + 0 ID=cds.g8453.t1;Parent=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS exon 3844 4005 . + . ID=g8453.t1.exon2;Parent=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS CDS 3844 4005 . + 0 ID=cds.g8453.t1;Parent=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS exon 4226 5437 . + . ID=g8453.t1.exon3;Parent=g8453.t1 NODE_1932_length_8480_cov_39.4055 AUGUSTUS CDS 4226 5437 . + 0 ID=cds.g8453.t1;Parent=g8453.t1 #PROT g8453.t1 g8453 MSAPASLSPAASTAYLDLEALNSLCGGSIPTFTLDINDSSNDTSSTSRGDCEGDGETASLRLKLKMASRMLERLRSDLAHAHNRLSERTSLAVGMETTVNHLRSQLSEETERRQRAEAAMRTLEGDVAEMGTSIARSRDELVFLRTQYAREIDRRAEAVHELDDMTAAVERVAQDLFPRDYAWAKSMAARRVSALSRDSATAASTAELSDEGILDDHNPSCRVGLEVLRTARRVRVSIEKEYKTERSSREGAAIRDFEEFAAFYRETLARAAAENERSGKSPSAKKGGSSSGLLSSSSSSLSTSSSQQSPTSPPAHRGKKGAGCWAHDHPYFLRCIREDVAPCVSFPKSIVPQDDILKAILIDDLALETIPRNVRVTTPDATFACACCKKTTDGIPEYRFKPALSSPRCSWYALDAACRDRLVAACELASFGRNLASGLLKLTPAAAHEKLRALRHTAFISRFGGVVSAIDAADAARSGRSSQAFLDVPGSLEESRVHASTHRGSAIDVRRQTLEYMAVVLEPAHKAATVLQRAYRRRLAWRAALNAVERRRKQREDAAAVCVQRWFREQRLRRSAVRATAAITTGTTGTTGSGQSAWGWKQHLQRAAIILTPV* # PASA_UPDATE: g9820.t1, single gene model update, valid-1, status:[pasa:asmbl_5743,status:12], valid-1 NODE_3228_length_3962_cov_32.3326 . gene 1542 3946 . - . ID=g9820;Name=g9820.t1 NODE_3228_length_3962_cov_32.3326 . mRNA 1542 3946 . - . ID=g9820.t1;Parent=g9820;Name=g9820.t1 NODE_3228_length_3962_cov_32.3326 . five_prime_UTR 3915 3946 . - . ID=g9820.t1.utr5p1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 3847 3946 . - . ID=g9820.t1.exon1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 3847 3914 . - 0 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 3501 3603 . - . ID=g9820.t1.exon2;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 3501 3603 . - 1 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 2966 3114 . - . ID=g9820.t1.exon3;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 2966 3114 . - 0 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 2632 2717 . - . ID=g9820.t1.exon4;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 2632 2717 . - 1 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 2339 2448 . - . ID=g9820.t1.exon5;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 2339 2448 . - 2 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 2009 2105 . - . ID=g9820.t1.exon6;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 2009 2105 . - 0 ID=cds.g9820.t1;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . exon 1542 1549 . - . ID=g9820.t1.exon7;Parent=g9820.t1 NODE_3228_length_3962_cov_32.3326 . CDS 1542 1549 . - 2 ID=cds.g9820.t1;Parent=g9820.t1 #PROT g9820.t1 g9820 MSNEMAHYAQDCWDAECFSSYGWVECVGCADRSCYDLSCHSKATKVDLLYREDLRPPYKKVEVMQVTMNKGLIGKTYKTDAQTIITHLEKTEDSALAALKEKLETEGKATIAINGKDFVIESKMASIQRVEKQITVREYTPSVIEPSFGIGRIIYTILEHSFFVREGDEQRGVLALPSVIIAPINCSVLPLSSHETFEAFIPTIFT* # ORIGINAL: g9819.t1 original gene structure, not modified by PASA NODE_3228_length_3962_cov_32.3326 AUGUSTUS gene 235 943 . - . ID=g9819;Name=g9819.t1 NODE_3228_length_3962_cov_32.3326 AUGUSTUS mRNA 235 943 . - . ID=g9819.t1;Parent=g9819;Name=g9819.t1 NODE_3228_length_3962_cov_32.3326 AUGUSTUS exon 764 943 . - . ID=g9819.t1.exon1;Parent=g9819.t1 NODE_3228_length_3962_cov_32.3326 AUGUSTUS CDS 764 943 . - 0 ID=cds.g9819.t1;Parent=g9819.t1 NODE_3228_length_3962_cov_32.3326 AUGUSTUS exon 235 421 . - . ID=g9819.t1.exon2;Parent=g9819.t1 NODE_3228_length_3962_cov_32.3326 AUGUSTUS CDS 235 421 . - 0 ID=cds.g9819.t1;Parent=g9819.t1 #PROT g9819.t1 g9819 MKFGKFLEDSKVPDWARHYVSYKELKKCIKAAEKRSGDASLNSEEVDREFFFGLDRDLDKVTEFYLGKLSECQGRLRVIVSRKTCLDIESQTENVNTVSVQSLLIAFRELNNDLINLQKFVE # PASA_UPDATE: g10887.t1, single gene model update, valid-1, status:[pasa:asmbl_1591,status:12], valid-1 NODE_143_length_35329_cov_42.3382 . gene 15865 17710 . - . ID=g10887;Name=g10887.t1 NODE_143_length_35329_cov_42.3382 . mRNA 15865 17710 . - . ID=g10887.t1;Parent=g10887;Name=g10887.t1 NODE_143_length_35329_cov_42.3382 . exon 17696 17710 . - . ID=g10887.t1.exon1;Parent=g10887.t1 NODE_143_length_35329_cov_42.3382 . CDS 17696 17710 . - 0 ID=cds.g10887.t1;Parent=g10887.t1 NODE_143_length_35329_cov_42.3382 . exon 15865 17483 . - . ID=g10887.t1.exon2;Parent=g10887.t1 NODE_143_length_35329_cov_42.3382 . CDS 15969 17483 . - 0 ID=cds.g10887.t1;Parent=g10887.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 15865 15968 . - . ID=g10887.t1.utr3p1;Parent=g10887.t1 #PROT g10887.t1 g10887 MYRNTSIQAALPYALCASLAFNFFVLVVYLSQTESGLDLCPDTTYLNRDASGHDHDASHGSDTTAAGMGLQAPVLAVRDISALTTAEIDSGAAAVAAAQPTPIPCPKLDVPSDTLSASLPEFSDAQLHELAQSWPVHPRPPTSQCPSRLAKVDWIHLECNYLQAEYTDVVADCPCPELRRAPQLYLPFISDAAYFGTYTVTNDSCLQYPHRPCYGNNYAFQYKSNADLYHDHPSIEDRHFNPPPAFVDWPRYSFANFTALAERPPGSDCITCFMFDVDRRRWTQDIQDDWIGQQSLPLKRGGSPVIRTALDIGGGAGGLASVLGVDYNVHTLVIAKDWKGLPYLHTAAARGVHTIQVNALQRLPMMDGAVDFVHSAWLINVVESTRQFANTLYEWERVCRPGGYVMITGFNKPLGSIGPYLDEFAQLVGRLNWRIVSAGVRGHNRKKRLPIGEKLMGILSGSATNAELVEFVSRKVRVDVGMDEADASRDGSMPAFLFFTVQKPFVRFA* # PASA_UPDATE: g10884.t1, single gene model update, valid-1, status:[pasa:asmbl_1597,status:3], valid-1 NODE_143_length_35329_cov_42.3382 . gene 4894 7390 . + . ID=g10884;Name=g10884.t1 NODE_143_length_35329_cov_42.3382 . mRNA 4894 7390 . + . ID=g10884.t1;Parent=g10884;Name=g10884.t1 NODE_143_length_35329_cov_42.3382 . five_prime_UTR 4894 5066 . + . ID=g10884.t1.utr5p1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . exon 4894 5141 . + . ID=g10884.t1.exon1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . CDS 5067 5141 . + 0 ID=cds.g10884.t1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . exon 5387 5893 . + . ID=g10884.t1.exon2;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . CDS 5387 5893 . + 0 ID=cds.g10884.t1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . exon 6306 6512 . + . ID=g10884.t1.exon3;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . CDS 6306 6512 . + 0 ID=cds.g10884.t1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . exon 6727 7390 . + . ID=g10884.t1.exon4;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . CDS 6727 7041 . + 0 ID=cds.g10884.t1;Parent=g10884.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 7042 7390 . + . ID=g10884.t1.utr3p1;Parent=g10884.t1 #PROT g10884.t1 g10884 MAEPIVHQVIRLLRVEKLHTRDIHQKLTPGSNVSITALRDHVMAELEKWNWVRKVRMNRDQFQELLAKEKAIADEAVAAATTKKAKKAIMMVSTTPRTRPKVWELNTTIVRPGMPGTTVLPEWRPIVVGRFTQNPPHICADLAGRSIADPPLIVKCGLKQPKKVPVPGEGNYLGIRIPSVRGRRKAGKAPRRERVLAQKARRDALIAKRCPPTTEAGIQRRALLETQRLAEEEKKAAAAEAEKDDWVRNVPPKRGWAWKQAVKAAKYKRQKEALRQRMIDLAEGRKQAEIDKFLTEKSALDTGGKGRVATVAAAVLAKKEKEVALRAAKLEAKKQRRVEHKGNVKARKESKAQQESKGEVEGSNILA* # ORIGINAL: g10883.t1 original gene structure, not modified by PASA NODE_143_length_35329_cov_42.3382 AUGUSTUS gene 88 4355 . - . ID=g10883;Name=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS mRNA 88 4355 . - . ID=g10883.t1;Parent=g10883;Name=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 4327 4355 . - . ID=g10883.t1.exon1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 4327 4355 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 3963 4086 . - . ID=g10883.t1.exon2;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 3963 4086 . - 1 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 3686 3828 . - . ID=g10883.t1.exon3;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 3686 3828 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 3493 3559 . - . ID=g10883.t1.exon4;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 3493 3559 . - 1 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 3085 3195 . - . ID=g10883.t1.exon5;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 3085 3195 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 2722 2826 . - . ID=g10883.t1.exon6;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 2722 2826 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 2254 2348 . - . ID=g10883.t1.exon7;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 2254 2348 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 1866 1983 . - . ID=g10883.t1.exon8;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 1866 1983 . - 1 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 1397 1499 . - . ID=g10883.t1.exon9;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 1397 1499 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 1082 1173 . - . ID=g10883.t1.exon10;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 1082 1173 . - 2 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 681 811 . - . ID=g10883.t1.exon11;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 681 811 . - 0 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 426 497 . - . ID=g10883.t1.exon12;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 426 497 . - 1 ID=cds.g10883.t1;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 88 211 . - . ID=g10883.t1.exon13;Parent=g10883.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 88 211 . - 1 ID=cds.g10883.t1;Parent=g10883.t1 #PROT g10883.t1 g10883 MADQEVPQLGADGQPLSKKAAKKLEKDKEKEAKKAESARKRAEEDAAKDTPDFAKEFYGLSPLNQSAEKKVRNWTRVLDLSSAHAGQSVLIRARIHNSRTTGKQCFLVLRQRQSTVQALVYVSKQMVKFAGNLSKESLVDIEGVVTKADQKIEKCTQQDVEIHVEKMFCISQAEPRLPFSLDDASRPEIEGEETADAQFVRVNIDTRLDNRVIDLRTTTNQAIFRLQSATGALFREFLTANDFTEIHTPKIIQTASEGGANVFKVSYFKGSAFLAQSPQLYKQMAICADMERVFEIGPVFRAEDSNTHRHLTEFVGLDLEMAFNDHYHEVLDMLDKLFVSIFKGFRDRFAADISTVSKQFPCEPFKFLEPSLRLSWKEAIALLRENGIENGDFEDLSTANEKALGRFVKAKYDTDFFMLDKFPLAVRPFYTMPDPHDP # ORIGINAL: g10888.t1 original gene structure, not modified by PASA NODE_143_length_35329_cov_42.3382 AUGUSTUS gene 19297 20920 . - . ID=g10888;Name=g10888.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS mRNA 19297 20920 . - . ID=g10888.t1;Parent=g10888;Name=g10888.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 20171 20920 . - . ID=g10888.t1.exon1;Parent=g10888.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 20171 20920 . - 0 ID=cds.g10888.t1;Parent=g10888.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 19297 19971 . - . ID=g10888.t1.exon2;Parent=g10888.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 19297 19971 . - 0 ID=cds.g10888.t1;Parent=g10888.t1 #PROT g10888.t1 g10888 MLSNMSMCSHDPQSAGSILGTAPGHWQKNGVTIQTGDDSAHGERKILVHFEMQTDAPADHDQSPSSLVLASATTGRGRTVTGAHVLPLADLDSDADFSNAQMLELAQSWPVRPRPPTSQCPFTVANIDWRTLTCEYMTEAHLNIVADCPCPALRAQLPYAPFFPDAAYFGTYAVTNDRCLQFPHRPCYGNNYAFQYKSNADLYHDHPSIEDRHFNPPPAFVDWPRYSFANFTALADRLPGSDCITCFMFDDIQDDWIGQQSLPLKRGGSPVIRTALDIGGGAGGLASVLGVDYNVHTLVIAKDWKGLPYLHTAAARGVHTIQVNALQRLPMMDGAVDFVHSAWLINVVESTRQFADTLYEWERVCRPGGYVMITGFNKPLGSIGPYLDEFAQLVGRLNWRIVSAGVRGDNRKKRLSIGEKVMGILSGSATNAELVEFVSRKVRVDLGMDEADASRDESMTAFLFFTVQKPFVRN* # PASA_UPDATE: g10889.t1, single gene model update, valid-1, status:[pasa:asmbl_1595,status:3], valid-1 NODE_143_length_35329_cov_42.3382 . gene 23302 25842 . - . ID=g10889;Name=g10889.t1 NODE_143_length_35329_cov_42.3382 . mRNA 23302 25842 . - . ID=g10889.t1;Parent=g10889;Name=g10889.t1 NODE_143_length_35329_cov_42.3382 . five_prime_UTR 25348 25842 . - . ID=g10889.t1.utr5p1;Parent=g10889.t1 NODE_143_length_35329_cov_42.3382 . exon 25339 25842 . - . ID=g10889.t1.exon1;Parent=g10889.t1 NODE_143_length_35329_cov_42.3382 . CDS 25339 25347 . - 0 ID=cds.g10889.t1;Parent=g10889.t1 NODE_143_length_35329_cov_42.3382 . exon 23302 24954 . - . ID=g10889.t1.exon2;Parent=g10889.t1 NODE_143_length_35329_cov_42.3382 . CDS 23542 24954 . - 0 ID=cds.g10889.t1;Parent=g10889.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 23302 23541 . - . ID=g10889.t1.utr3p1;Parent=g10889.t1 #PROT g10889.t1 g10889 MLLRRPSLILLLTTSVLLNVLFAITIVRLQVTCNRDDGPHGRNAVAASGSSIGSDYDELNNLSGRSVIDCNSTMYVRDPVTSTATAKTSNASEFNALQLDDLRQSWPVRPRLSTWRCPPIESNKVWEENAPCARHHDSYMQIFVPDCPCATLKAFPDPAFFGTYAVKGPCLQFPLRPCYTAIEHITPYASNAEFMADKPTLLERYFNPPASFIPWGRFLFQGFEALANRRAGSDCIVCFMFNVDRQRWTKLIETDWIGIQNLPLIRGGSQVIRTALDIGGGAGGLASVLSSTYDVHTMVVAYEWKGLPYLHTAAARGVLTLQVDAFKRLPLVDGAVDFVHSAWLINVVNSTRHFTNSIYEWERVCRPGGYLMVTGFNKPLQLIAPYIYEVFQLYVRLNWRIISFGARGSNNVPVLELGPMMRKVDAGELKIEEVIMAAKAKARADVGYPETGERDAENTVFLFLTVQKPFVRN* # PASA_UPDATE: g10891.t1, single gene model update, valid-1, status:[pasa:asmbl_1592,status:12],[pasa:asmbl_1596,status:12], valid-1 NODE_143_length_35329_cov_42.3382 . gene 31869 35218 . - . ID=g10891;Name=g10891.t1 NODE_143_length_35329_cov_42.3382 . mRNA 31869 35218 . - . ID=g10891.t1;Parent=g10891;Name=g10891.t1 NODE_143_length_35329_cov_42.3382 . exon 34717 35218 . - . ID=g10891.t1.exon1;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . CDS 34717 35218 . - 0 ID=cds.g10891.t1;Parent=g10891.t1;5_prime_partial=true NODE_143_length_35329_cov_42.3382 . exon 34383 34496 . - . ID=g10891.t1.exon2;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . CDS 34383 34496 . - 2 ID=cds.g10891.t1;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . exon 33948 34081 . - . ID=g10891.t1.exon3;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . CDS 33948 34081 . - 2 ID=cds.g10891.t1;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . exon 33600 33698 . - . ID=g10891.t1.exon4;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . CDS 33600 33698 . - 0 ID=cds.g10891.t1;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . exon 31869 33271 . - . ID=g10891.t1.exon5;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . CDS 32006 33271 . - 0 ID=cds.g10891.t1;Parent=g10891.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 31869 32005 . - . ID=g10891.t1.utr3p1;Parent=g10891.t1 #PROT g10891.t1 g10891 TQQQRDTAAASLAAKEDEELRLAIALSLQEAEKTRQLVGTSSKPSQSYGYDARNNRRTSYDLPSDSGSSGGVVSDPALAKYLDRDYWEQRGKDGSVKVSQSPQPQQQQQQQPQQLQQQQQQQGKAGTQAQAAAVGGEVEAGTDDERFVDAMSASLSMFEDRLKAAGAAAASGRPFDESTLRSLYQSLCVMHPRLLKLIEEQEAEGVNLNAIDRKIEQAELARRALDEARAEHAARLKREADEQELMRKMQVQQRLRELQVQEEERKRAQEEQQRMVRQMQLEQERLLEQQRMEQERLRQIQQQQLKSQLYGGGVPVSAQLGNAPSPYQVQAPAYGLPSHGMAALPQQQQQQGYSAPGLVQPGGMVNAGLVGIPSGGGPGGYSAPAFYAPQQTYAAQLPHPQHQQQQPPQQQQQHQVAPPNGIANGHANGHSLPPQQQQQQQQQQPQQQQQQPQHGVAPYNVGVYGPPPTQQPQQQHPGFPPQQQPQYDQYMSKGQVQQPPVQQQSPAQLPLQHAPQHQMGLPQQPPPQPQQQQQQQQPQMQIQMQYGGAPLSNAQHSAIQSGMVHNQDPRQTSGMFSPPPPVSGSHAMQTQPSSVPQNGPYNNGPILPQHAAQGQPQPPPHQQHPQQMQQMQQPPYGGMGMSVPQQQQQQQPQTNGAMPPPQYASNPQGGYAYAPSGGYGAPLPGMQQQQPPPIVPEAPLISFD* # PASA_UPDATE: g10885.t1, single gene model update, valid-1, status:[pasa:asmbl_1594,status:12], valid-1 NODE_143_length_35329_cov_42.3382 . gene 7390 9444 . - . ID=g10885;Name=g10885.t1 NODE_143_length_35329_cov_42.3382 . mRNA 7390 9444 . - . ID=g10885.t1;Parent=g10885;Name=g10885.t1 NODE_143_length_35329_cov_42.3382 . five_prime_UTR 9005 9444 . - . ID=g10885.t1.utr5p1;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . exon 8900 9444 . - . ID=g10885.t1.exon1;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . CDS 8900 9004 . - 0 ID=cds.g10885.t1;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . exon 8537 8602 . - . ID=g10885.t1.exon2;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . CDS 8537 8602 . - 0 ID=cds.g10885.t1;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . exon 7390 8007 . - . ID=g10885.t1.exon3;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . CDS 7909 8007 . - 0 ID=cds.g10885.t1;Parent=g10885.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 7390 7908 . - . ID=g10885.t1.utr3p1;Parent=g10885.t1 #PROT g10885.t1 g10885 MDLKQQLMLNQFVNATGCSHDNALEVLASTKWQFEAAMSTFYQQQPTPASGFMGATPANTPANTPATPPNFPAAIQAFQNMNVDKKQRK* # ORIGINAL: g10886.t1 original gene structure, not modified by PASA NODE_143_length_35329_cov_42.3382 AUGUSTUS gene 10662 15441 . + . ID=g10886;Name=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS mRNA 10662 15441 . + . ID=g10886.t1;Parent=g10886;Name=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 10662 10898 . + . ID=g10886.t1.exon1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 10662 10898 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 11217 11226 . + . ID=g10886.t1.exon2;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 11217 11226 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 11656 11728 . + . ID=g10886.t1.exon3;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 11656 11728 . + 2 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 12029 12205 . + . ID=g10886.t1.exon4;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 12029 12205 . + 1 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 12564 12637 . + . ID=g10886.t1.exon5;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 12564 12637 . + 1 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 12842 13011 . + . ID=g10886.t1.exon6;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 12842 13011 . + 2 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 13172 13288 . + . ID=g10886.t1.exon7;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 13172 13288 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 13464 13520 . + . ID=g10886.t1.exon8;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 13464 13520 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 13723 13965 . + . ID=g10886.t1.exon9;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 13723 13965 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 14276 14482 . + . ID=g10886.t1.exon10;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 14276 14482 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 14622 14760 . + . ID=g10886.t1.exon11;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 14622 14760 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 14943 15046 . + . ID=g10886.t1.exon12;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 14943 15046 . + 2 ID=cds.g10886.t1;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS exon 15307 15441 . + . ID=g10886.t1.exon13;Parent=g10886.t1 NODE_143_length_35329_cov_42.3382 AUGUSTUS CDS 15307 15441 . + 0 ID=cds.g10886.t1;Parent=g10886.t1 #PROT g10886.t1 g10886 MADDIPQYVEGGANPAVGYYDPTMPTVDDRNGADALPAPAPWQDGQSHRDLHAQPQEANSHPHPPSSQHGSDPAQDRPQGYGGDISERAMERERQRLARESEVERDRDDRDRRDRDRSRERDRGDRGDRGDRDDRGRRDSHRDRDRRDRDRSRERDRGDDDRRRHSPSQLWDTPAAGYEHLSATEYKRLLGEGRLPPPGQRPAPSFALGQAGPGTASTAAAASAGVNQGTRQARRLYVGNIPFGVSEQEMSEFFQHHMDNAKLIMEPGSPILSVQINHEKNFAFLEFRSIDECTNCLAFDGIHFKGTPIRLRRPKDYQPIPGHSDVPPAVHVPGVISTIVPDSANKIFIGGLPNYLNEDQVKELLQSFGELRAFNLVKDSNSGLSKGYAFFEYVLASSTEAACIGLNGMALADKSLVVQRASIGKTAAQQMGGPPKSGMGMGMGMGMGGATGANLIPLGMPTGAYAMPPGVATIDFSNATPVLQLLNMVLPEELVDPDEYRDIVEDVREECSKFGNVVSLEIPRPIPGETIPGVGKIYVEFTTPEECRQAQMALAGRKFANRIVVTSFYDTQKYRNKQFE* # PASA_UPDATE: g10890.t1, single gene model update, valid-1, status:[pasa:asmbl_1598,status:3], valid-1 NODE_143_length_35329_cov_42.3382 . gene 26165 31391 . + . ID=g10890;Name=g10890.t1 NODE_143_length_35329_cov_42.3382 . mRNA 26165 31391 . + . ID=g10890.t1;Parent=g10890;Name=g10890.t1 NODE_143_length_35329_cov_42.3382 . five_prime_UTR 26165 26352 . + . ID=g10890.t1.utr5p1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 26165 26425 . + . ID=g10890.t1.exon1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 26353 26425 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 26803 26962 . + . ID=g10890.t1.exon2;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 26803 26962 . + 2 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 27142 27271 . + . ID=g10890.t1.exon3;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 27142 27271 . + 1 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 27580 27794 . + . ID=g10890.t1.exon4;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 27580 27794 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 28018 28165 . + . ID=g10890.t1.exon5;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 28018 28165 . + 1 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 28522 28758 . + . ID=g10890.t1.exon6;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 28522 28758 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 29058 29508 . + . ID=g10890.t1.exon7;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 29058 29508 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 29779 29862 . + . ID=g10890.t1.exon8;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 29779 29862 . + 2 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 30163 30377 . + . ID=g10890.t1.exon9;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 30163 30377 . + 2 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 30724 30816 . + . ID=g10890.t1.exon10;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 30724 30816 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . exon 31097 31391 . + . ID=g10890.t1.exon11;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . CDS 31097 31216 . + 0 ID=cds.g10890.t1;Parent=g10890.t1 NODE_143_length_35329_cov_42.3382 . three_prime_UTR 31217 31391 . + . ID=g10890.t1.utr3p1;Parent=g10890.t1 #PROT g10890.t1 g10890 MSSSFGLGSEWDWGSEQETQGPSYGGYGGGGDDNAEDDAAAEEMQTKYASKDSVIFVVDASKDMFVPMEDGSIPFQLALKCIKNTFEAKIIASDSDYLGVIFYGTRETKNPTNLKNIYVFQDLDRPGASQIMALEGLTAGDKKKFEKDIGHAPADTAPFGDALWQCVSLFSNSLQKVGMKRVFVFTNDDEPAGSTESGRAQAFQRSRDLGVIGAQIELMHMSKPGRKFDSDKFFRELVYGDEDEGQPMPDPAETFEGLMDRMRRKQFKKRSLMKIPLFIGDGVEIGVSVYNLVGDTKKGTPKWLDKRTNEAVKTVSQQICQDTGALLLPDDVKHGVIFGGERIIFSKADALSMRTLGRPGLVLMGFKPRDRLKRWHNVKVNSFCYPDETVIRGSSLVFKAILIKCAELRKVAICRFIPRQAAPPRFVALLPQVEVKDAQGIQLQAPGFHIIQLPYADDVRQSLQFEGERSEIGTDEIEKAKAFINSLSFEFNSLDFENPALQMHYRNLEALALNRDMPEGVVDSIEPATDKMDEAAGAEMRAFIDVVYPEGYEPGKGAKPAARKRPAAAKKDDGDAPPAKAAKVEVGDDVKAEVLAHAAKGTLAKLTVPVLKAFLTSSGVKVPSSAKKGDLVEMAENFCKK* # ORIGINAL: g8295.t1 original gene structure, not modified by PASA NODE_6402_length_575_cov_29.016 AUGUSTUS gene 51 223 . - . ID=g8295;Name=g8295.t1 NODE_6402_length_575_cov_29.016 AUGUSTUS mRNA 51 223 . - . ID=g8295.t1;Parent=g8295;Name=g8295.t1 NODE_6402_length_575_cov_29.016 AUGUSTUS exon 51 223 . - . ID=g8295.t1.exon1;Parent=g8295.t1 NODE_6402_length_575_cov_29.016 AUGUSTUS CDS 51 223 . - 2 ID=cds.g8295.t1;Parent=g8295.t1 #PROT g8295.t1 g8295 SIGIRSQIPSGVTMSFPKFTTERTLLISLIPKSHCALRSLTTRKRSALRGANTSPIM # ORIGINAL: g2672.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 242 1903 . + . ID=g2672;Name=g2672.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 242 1903 . + . ID=g2672.t1;Parent=g2672;Name=g2672.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 242 1903 . + . ID=g2672.t1.exon1;Parent=g2672.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 242 1903 . + 0 ID=cds.g2672.t1;Parent=g2672.t1 #PROT g2672.t1 g2672 MDVDFSSLFEAYDKQTTDFASFVAIHTGIPREFIADFFRISGDSVEYNFGFAIRGRVLAEWLEVDEKSIRRGLKRTFTENVDWKKEHLGNKLGQYECLLTANCMKKYCMSALSERANLVRRYYISIETTVDRYKSYIIAGLKKDIFKREEQHIKDNAPKPGYICIFASKDPAKTATKLRKYLAVKDIPHARDKNQSEIQSVISVRDVNAVSKCVERYLKSIDATKEQGYYQVSQTEVQEFVGSCSDLATQISAMELIRSSERNKTYVMVEEKCTSCQIAAIDETKNFKKFIQTFTDIDAAFVDSYIAFNALERTRGGLFSVALDDFVPWIGMERKNVLKRLNASFKEDIDYIVHDFEGKRQNIRLTMECCKCFVLASRTKVAKELRSYMIEMEAILFKFKDYVINGLKERIMELEAHTKPMRKMGRKSVLYGFLVEDEEDVAKLGTAEDIDPRFSTYMTGRVSTIDLLFLIETANPKDVEFCAKTFLRQYRYKGRTEIYKVPREILMYTVNQCSKMFGNVTYVEYMHSTPPTAEHIFVAVLETPEIAKTQPIK* # ORIGINAL: g2682.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 37095 37361 . + . ID=g2682;Name=g2682.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 37095 37361 . + . ID=g2682.t1;Parent=g2682;Name=g2682.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 37095 37361 . + . ID=g2682.t1.exon1;Parent=g2682.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 37095 37361 . + 0 ID=cds.g2682.t1;Parent=g2682.t1 #PROT g2682.t1 g2682 MSEDDFVDARSIIIYEYETFTSFGGEVEGLIEHEIQHWGVCQMTAAFECEDRPKMLTKANIEAGLTAVKKHKTMDQNVKSRAYLVMFS* # ORIGINAL: g2677.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 22197 25265 . - . ID=g2677;Name=g2677.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 22197 25265 . - . ID=g2677.t1;Parent=g2677;Name=g2677.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 22197 25265 . - . ID=g2677.t1.exon1;Parent=g2677.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 22197 25265 . - 0 ID=cds.g2677.t1;Parent=g2677.t1 #PROT g2677.t1 g2677 MITRDLCISVSANEVIETFVDAVLDDLSDLPDETGLIQFRLSLLNNDGAREAAVQQIFNIGTCADDVMFYCADPERNWKAGGVGVCEVDNEPLNYYCMWPFNATEPTLIVLRLELFDNTLLCHVNSAQRVQAVSDLIRFRKVLAGSVVPPKWPAIPSTKRRSLTPNWNEWQARVNAAQNEIKSGTIDKVVLSRKSRYRSSDMSWLDPVKLFKNNPMAQHFYCRRGKQSFISLSPERLVTVDSGRVLVDAVAGTRPRGNNSAEDDRLASELLSSAKDRKEHEYVVNHVERVLEEFCTGTATSEIRVAKHARVQHLKVNVTGELRNEAAPLALVRALHPTPATCGFPIEPAMKHLVASGLEADRGMYAGTCGVISADAAHMIVGIRCASIEADTLELRAGCGIVDGSTARDEWKELNAKVSFYEAELARHWMECTGLAISRDLPVAHALVDELVRLGIKNFFVCPGARSAALAVAVCRTPGALLKAHYDERSAGFAAMGCALGLARPACIITTSGTAVANLLPAIIEARTSHIPLLILTADRPLQLQDCGANQTIRQEGIFGQYVCFEKTLVLSDDLCHALSLIDYAAHTATQTRSPVHINIRCEDPGDSHSWLFNHPTVTPITPITPITRHSEHLVDWILTNEPYLEYTDSVDRLYSAISGRRGLVVVGNVAGANINALLSNLSRCSNVLVYRDISSGMLGVHGDETTFRADLLLGNTAVFRRFCEELDFVLQLGDKIVSKSVNRLVETSGLPFYLAVNHGDRVDQYANCRLCFVGGFPQCDANSFCRPFDPAWDSFVADVQLWNKIAATAVSTCCANELQPLSEAQVVLTMSHLITHTMFIGNSGCIRDFNSYADRPLQVYCARGASGIDGQISTACGLACNTNRAVTAIFGDLTFLHDTNGLFMLKQCPVIVVVVNNSGGQIFRKLAPLSTLPPPIMNAAFVVEHDVSLMKLTAAHHIRHVTATTATELRAAYRAAIDALPSPTVIEAVASARDVTRRINETISSSISMGIKCDFAGNTIS* # ORIGINAL: g2683.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 39148 39552 . + . ID=g2683;Name=g2683.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 39148 39552 . + . ID=g2683.t1;Parent=g2683;Name=g2683.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 39148 39552 . + . ID=g2683.t1.exon1;Parent=g2683.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 39148 39552 . + 0 ID=cds.g2683.t1;Parent=g2683.t1 #PROT g2683.t1 g2683 MARTKQTARKSTGGKVARKQLATKSAIRSVPGGVKKPRRFRPGTVALREIRKYQKSTELLIRKMPFQRLVREIAQDCKMELRFQSAAIAALQEASESYLIGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA* # ORIGINAL: g2678.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 25374 27395 . - . ID=g2678;Name=g2678.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 25374 27395 . - . ID=g2678.t1;Parent=g2678;Name=g2678.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 25374 27395 . - . ID=g2678.t1.exon1;Parent=g2678.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 25374 27395 . - 0 ID=cds.g2678.t1;Parent=g2678.t1 #PROT g2678.t1 g2678 MSFFLKPAVFLTFAAVGSLLTLSTEPLAAINTHLFEANNEVANAGSTIQKTCIFGFLVALYALYIEYMSHKTKGKYKAVCDMGENMCCTRVLTSKYSSLLYLPNAFYGALFYVGVFVMAGCGYFDLIHNLALLACIGSCCLAYILYVLKDVCLVCIGIYLANVTLYLQTLDGSIADAASRLLANLDHFLYHDTPALDGRMRIIVYGALLLLCYFSYISRPHMGDSPMNSPELLRHSYAEMVTREGVMKYLKPLVSVRSLTLVRNVTAAAWIAVIVGFGGHLPVVLTGLGFLFLSGTSAGLIGTSHRWYIPMYTLVSLAFANGNANYSLDRLFSDAWPESYPFSPIEHGILRSGLGTKLATVFAAYSLTSGAVAKFANGGLRWMDGTSLGFYCSNKNNGHCMWLKRLIGLKPIGQALSVASIALEVFGVMVAWAGESRLFFTILFMKFHLGIWLTMWPNYLPQSFCYILMLDLFAAPGSTVRAMAGQSTALVSALCVLTFAALFACSLARTEYWPITSVPMYSFYRRGYNMEFLKGMWQLKALGKEYADARYPHTLGWSDSWIEVVVNSPDGRTVLNCRNLANGKVAGFVLKQYRRHIHDVAAKHAVNPDAGIAEAFLRDIMIPVIRKAAKLPASPAQALKLDGSETICLAMRVADTATGTKLEELASCTIAAA* # ORIGINAL: g2674.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 16796 18232 . - . ID=g2674;Name=g2674.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 16796 18232 . - . ID=g2674.t1;Parent=g2674;Name=g2674.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 16796 18232 . - . ID=g2674.t1.exon1;Parent=g2674.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 16796 18232 . - 0 ID=cds.g2674.t1;Parent=g2674.t1 #PROT g2674.t1 g2674 MPHVCELLAYGPSATIDSRTYSSTELISKVKLIAAALVSEGCMLGDVVASVSTDQFLTFILYYAVTWVGATFMPLNPKLSNAEIENCLQTGGAKFCIASQRHGPPRHHGTVCCSKLTRNRGGAAVRAYVKHIPEIALLCEKPNMLISLVPLIPPAPLQHDPAVIMFTSGSERSKGVMLSHANILFQAQNKTSWLTGSPVYLHMVPMFHVACFVHFAITQTGGRHVFIPSATRFNPELVAQIIAAEGVDTLLCVPTMIRKLNVSGGHAFGLVRLVVTGGESADSRLANLIREMFPASRWIHTYGMTECASTIAFSEPGVPFVGQPVVRNSLEISPGGEIRVRGPHVMMGYVNGPKVQHVDTGDLGELTEGNQLVLLGRIKTVIKTGGEAVHCCEVRDALLKSPLVQDCKVFGIPCSEFGEAVAASVLLSNAATNPHTPDIVAHLQQICKTTMANFKCPRRFFFPSLSDFENSSTSWKTQ* # ORIGINAL: g2679.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 27480 28325 . + . ID=g2679;Name=g2679.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 27480 28325 . + . ID=g2679.t1;Parent=g2679;Name=g2679.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 27480 28325 . + . ID=g2679.t1.exon1;Parent=g2679.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 27480 28325 . + 0 ID=cds.g2679.t1;Parent=g2679.t1 #PROT g2679.t1 g2679 MRFSSYSKRLVPDDSPVVYEAVGELEDVLYEKSECGIARITINRPEKRNAFRPKTVTELLGAFDNAGKDKRVRVIILRGQGEDAFCSGGDQSVRTTGGYQDDSVDHPTLSVLELQSLIRRTPKPVIAAVSGYAVGGGHVLHMVCDLTIAADNAVFGQTGPRVGSFDAGLGAAHMARLIGQKRAREMWFLCRMYSAERAYEMGLVNAVVPLKQLEEETHKWAREIMLGSPTAIRILKFALNAAEDGHMGLQQLAGECTGLFYQTEESLEGKQAFIEKRKPAF* # ORIGINAL: g2676.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 19774 22096 . + . ID=g2676;Name=g2676.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 19774 22096 . + . ID=g2676.t1;Parent=g2676;Name=g2676.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 19774 21685 . + . ID=g2676.t1.exon1;Parent=g2676.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 19774 21685 . + 0 ID=cds.g2676.t1;Parent=g2676.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 22071 22096 . + . ID=g2676.t1.exon2;Parent=g2676.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 22071 22096 . + 2 ID=cds.g2676.t1;Parent=g2676.t1 #PROT g2676.t1 g2676 MRFRSVDVVTAERALTKSLPRGKIRTLTTVTLVCEDEHSQVRGDATPLPGLHSETVEDVLEEILQWRPRILQGITKTEFDLLSLPLRFALETCSLKLNTAAPIALLTARLITGNNQTELQTDAINAIKSGFRVIKFKVDKADWDGRLVNQLWAAVQPASVGFRIDANKCWSFKEALEFASRTASVNVDFIEEPLQDEREIPALVRSRPGVRIALDESIRSVHFCDIIAEPDVRQRLILVVKPKVLGVKRSLELMNTAGLPTVVSSSFETEHGFPALFHLAREQPGVVHGFGTYRWFDDDPEHPWNKPILWPRSSVVLLHGFAGTPDDWAGVTSLLPRCEVLCPALPDCGFEQMCERVAAQIRGFVREGILVGYSLGGRVALAMVARRLVEPRRLLLVSTNMGLKTPEEKANRLAQDRTLAATLASHQNAECFLSDWYGRNRELFGSGFVDLLRKKGVWQSRCENMSVKKTARMLEIASVGATAHMWDDIVRMHGSVQIECLYGQLDKKYASVSAQLTASGVRVWNVPDVFHAVHIEKPISVVNALMEPILHSIKIGGRSRVVWIKPPLSTGGGNAAAYVFVHGCGFAGRMWGDIARRVQEGGAPSAIMCMVDLPMHGENDAAAISWGQLVDDVDDVLAYFHICAA* # ORIGINAL: g2680.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 28625 29520 . + . ID=g2680;Name=g2680.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 28625 29520 . + . ID=g2680.t1;Parent=g2680;Name=g2680.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 28625 28901 . + . ID=g2680.t1.exon1;Parent=g2680.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 28625 28901 . + 0 ID=cds.g2680.t1;Parent=g2680.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 29042 29520 . + . ID=g2680.t1.exon2;Parent=g2680.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 29042 29520 . + 2 ID=cds.g2680.t1;Parent=g2680.t1 #PROT g2680.t1 g2680 MNGGMNPSEDLRCELNNVLFNVSIPAEDGTDYCVKVFQRPFYCDSLRALFTGQKIHHPFDTDTHHKYTGFLPGAMDAVKNATAFDVKHDGACATHWPHFRPCDPKKDKWQIVAFERAKSQLNKLDRAVTIVTGEYMGRKFNNKASDPVDLDAAFVPHGSVGLEIPTALRTLEGFRRIFQAIPTIEGIVVYAEHSQDRYMAPPCGRVSALSAETECLKIRREHFSGMKWPAEGPEFLAKYGFTGGVSARAVL* # ORIGINAL: g2681.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 29926 35744 . - . ID=g2681;Name=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 29926 35744 . - . ID=g2681.t1;Parent=g2681;Name=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 35717 35744 . - . ID=g2681.t1.exon1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 35717 35744 . - 0 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 35464 35623 . - . ID=g2681.t1.exon2;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 35464 35623 . - 2 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 35246 35317 . - . ID=g2681.t1.exon3;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 35246 35317 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 35061 35132 . - . ID=g2681.t1.exon4;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 35061 35132 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 34906 34977 . - . ID=g2681.t1.exon5;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 34906 34977 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 34750 34821 . - . ID=g2681.t1.exon6;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 34750 34821 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 34448 34519 . - . ID=g2681.t1.exon7;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 34448 34519 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 34136 34207 . - . ID=g2681.t1.exon8;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 34136 34207 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 33822 33893 . - . ID=g2681.t1.exon9;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 33822 33893 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 33355 33487 . - . ID=g2681.t1.exon10;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 33355 33487 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 33139 33268 . - . ID=g2681.t1.exon11;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 33139 33268 . - 0 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 32406 32815 . - . ID=g2681.t1.exon12;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 32406 32815 . - 2 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 31614 32289 . - . ID=g2681.t1.exon13;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 31614 32289 . - 0 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 31273 31487 . - . ID=g2681.t1.exon14;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 31273 31487 . - 2 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 31046 31160 . - . ID=g2681.t1.exon15;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 31046 31160 . - 0 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 30908 30956 . - . ID=g2681.t1.exon16;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 30908 30956 . - 2 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 30602 30787 . - . ID=g2681.t1.exon17;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 30602 30787 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 30384 30517 . - . ID=g2681.t1.exon18;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 30384 30517 . - 1 ID=cds.g2681.t1;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 29926 30290 . - . ID=g2681.t1.exon19;Parent=g2681.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 29926 30290 . - 2 ID=cds.g2681.t1;Parent=g2681.t1 #PROT g2681.t1 g2681 MEKNVGRRHRQSGARLLQSLSALVVVVCLLCQAEGVIGACPDSCTCNGGAVLSCAFPTGTTTLDWSAKQLTSIASGLFDGIPGLKFLLLHSNQIATLPSGIFDKLTALTSLQLYSNQIATLPSGIFDKLTALTQLWLYDNQIATLSSGIFDKLTALSQLHLHSNRIATLPNGIFDKLTILNNLYLHSNQIATLPGGIFDKLATLTGLLLHSNQIATLPSGVFDKLTVLSELRVQAIDSAPIALSHAPARTAQRAIDSTAPAHARQGRAFTDLPAHLAHATAEFATIASSALELVTAVLYSALEAQTAILPVIVSPERKSCACNRGVCDDGFPGTGACDCSALLGVGGPNCNTTCDRLPGAQMYGNGCETSCACENGAACDASTGECTCAFGWKGVVCNVIVPPFVPKVNATAEVSDYRVGIRLKWSHDEIGPRAWNTPGWRYEITRTGCFKKVYQVGDALTFLDTDVVINQGYTYYVRAYNSKNMSSEPSLPAGIESLQKTEPPSPPYNVSSTPTLNLDNQQSMIKFTWKEDTSSGPIIKTFIFRDGRLVLEGQTATEYKDRNVVFGKTYVYEITSVNQYGNSTATSFSETASIGPSDSGTPASSSGNVAGPVAGGVVGAIVGAAGIVSAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKITSLSSADEIRSARSAFMAEIDLMRTIPNHTNIIELIGVCTQSDPNCMVLEFAAHGDLRHFLSDSKASDFSSSDLLCFCIDIARGMEHLAKCGIVHRDLAARNCMVVAGPRAPNTIENGWKLSPKAQVIVKVADMGLSRDTATTDYYVAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLAYASMETCWRKHAETRPQFSQLVLQLRRGMAVLCGTESNGGGNFGGAVTDAAALGQFDAYALTVPESAYAETVIEAGEDGSLHTLQNPIFQKDSISMTGHSSA* # ORIGINAL: g2675.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 18954 19739 . - . ID=g2675;Name=g2675.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 18954 19739 . - . ID=g2675.t1;Parent=g2675;Name=g2675.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 18954 19739 . - . ID=g2675.t1.exon1;Parent=g2675.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 18954 19739 . - 0 ID=cds.g2675.t1;Parent=g2675.t1 #PROT g2675.t1 g2675 MIVIAMHILTIARAARPWTFIIMAISLVKAGVSVGEHAAIVWMFLLQAFANVANTYYDYTAGNDVASHSHDRTIVDGHATPADMRKLMTVLGSLSFAAMFYTTGWNRPPSFWLSVIAGYVVLLAYSHPVLSLKRRALGEVAVILAYGILIPKVLGDITGRSWGACLDSMPHALYSSAIMLANNIRDVHQDAKSNVKTVVVRIGLAWAIKLYCVVLLCAGLLSDFGSVALSFSVIVYAVANKRRWHLPQLTALVDLASHVAL* # ORIGINAL: g2673.t1 original gene structure, not modified by PASA NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS gene 13912 14778 . + . ID=g2673;Name=g2673.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS mRNA 13912 14778 . + . ID=g2673.t1;Parent=g2673;Name=g2673.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS exon 13912 14778 . + . ID=g2673.t1.exon1;Parent=g2673.t1 NODE_80_length_43656_cov_29.6474_potentialcontaminant AUGUSTUS CDS 13912 14778 . + 0 ID=cds.g2673.t1;Parent=g2673.t1 #PROT g2673.t1 g2673 MLSVGEVGLSISVLTDGRWETVTSAPRVAIVRLHTVEVQNDEHITFLRQLELMGTRIINPISGILACLNKFWHLQELAKAGLPVALTVTTPIANQLDRAVGFVRKESGLSFPLVSKSVRGNKGNAVFLVQNEELLDDLRGVLNQKTPYIYQQYIGTSHGRDMRVIVIGGKVIGGMIRQCNTGRMQSNLAQGGSCVAIKTVSPKVEQIALACARILNLDVVGVDLLFGEGQDEYVIAEVNNNVGFVGFDSSHGIEVARILVEYARELAANLAKAESTNLESNGISVPSV* # PASA_UPDATE: g2880.t1, single gene model update, valid-1, status:[pasa:asmbl_8648,status:12], valid-1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . gene 4 572 . - . ID=g2880;Name=g2880.t1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . mRNA 4 572 . - . ID=g2880.t1;Parent=g2880;Name=g2880.t1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . exon 518 572 . - . ID=g2880.t1.exon1;Parent=g2880.t1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . CDS 518 572 . - 0 ID=cds.g2880.t1;Parent=g2880.t1;5_prime_partial=true NODE_6426_length_572_cov_18.4225_potentialcontaminant . exon 4 312 . - . ID=g2880.t1.exon2;Parent=g2880.t1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . CDS 188 312 . - 2 ID=cds.g2880.t1;Parent=g2880.t1 NODE_6426_length_572_cov_18.4225_potentialcontaminant . three_prime_UTR 4 187 . - . ID=g2880.t1.utr3p1;Parent=g2880.t1 #PROT g2880.t1 g2880 ADFIHRGILLTAELKKETGAKLKDFKDALAANNSPVIPKIVELRGEVESFARKFEMPGN* # PASA_UPDATE: g7561.t1, single gene model update, valid-1, status:[pasa:asmbl_9083,status:12], valid-1 NODE_728_length_18441_cov_41.9401 . gene 3359 17410 . - . ID=g7561;Name=g7561.t1 NODE_728_length_18441_cov_41.9401 . mRNA 3359 17410 . - . ID=g7561.t1;Parent=g7561;Name=g7561.t1 NODE_728_length_18441_cov_41.9401 . exon 3359 17410 . - . ID=g7561.t1.exon1;Parent=g7561.t1 NODE_728_length_18441_cov_41.9401 . CDS 3581 17410 . - 0 ID=cds.g7561.t1;Parent=g7561.t1 NODE_728_length_18441_cov_41.9401 . three_prime_UTR 3359 3580 . - . ID=g7561.t1.utr3p1;Parent=g7561.t1 #PROT g7561.t1 g7561 MVAKLDADVRLRWIQSKACIHLRLPDTSVFVDLMTKEDGDSKETNEKHVLDFLDGVSTTSAMVLYTTHEEVRVPIARPETPDTSDDNEASLERPMLDAHAAAEAVASTSAEATHTPQPRTDETANGSLTPGADSLLDASGGVIGGAASGLGGDGNGEGNEHGGAAAGHAAETLPSFVIENRLVLRVTFDHIPNKKKESYVRLMYFIKNVEKVPTPSRGDNDSEPISEAFEYGVLTGSSLLMMKQAIGDVYEPLISAAPAEVNETIGGKARKGDVQIRSEFITSMVKFSAHIANVMEQVSGDIQIGIPNVTIDDVNASAKDFDTVMQIESAAELWVSAIDTLIEQVLNRVPTSKGPLGEIQFWHDRNALLGALHEQLNLPLVQDMIQVLVRAESQVYGRLDYKLSELDKYYGEAKDNVKFLATLERHFKNITHGTLNVILETIPSMMNALRMVWIISRHYNKDDRMVPLMERIANTLADRVEGTVNMRTILRENPAEAKAKIKESAAVLQLWSDTYFAVREKIEASGRDQRWEFDRKRLFDRTEYMKARCHDVHNIIQDVEEFRNVLGPELKAVTGDHERIDEVLRRVEGLVELVEEVSFDVFDQRQAHLWQGVTERFERQKRDIEALAKHFIDASFKALRSSETAFDLLQNFKNLQSGAAINSVVNAQMLKKYDEILMQFCKEVDVVDQMFQAGREHPPCYKNQPPVAGAINWSRSLFYRIKKPVLRFQTLKGMLNTDQGKFATKKYLTVARAIREFENRLYQQWCTDVEENAINFLKKNILEFEKENAEDPTAARRITCTFAGKIWEIIREAKYLDTIGFSIPETALNITLQEEKYLTQVKDVEDMLRDYHAVFQSLKDAERGLLRGEMVRLEQVLVPGVKRINWQSLGVPDFLAKANQEIKKFYSLVNQIKKSAQDISAHIASIANARLIRPISPTDELIDCRDLTDQLEQFRNSAIESLVRRYRSIPPLLEKLEGFVVHTNTGRSPDMRSYYGHWERQMFNALLHLVLASTTSFLQTITRKKRERMHPLFKVSASLSAPEIVINPSIPDIHKIVLKYCVGFVDAMKQFVRWQHGTCLETPPQYVGDDQQPVIFSFYPDISAHPDVIATLTAINTNVQKTLTHLARHVDTWRRYKPLWKLDKMITMEKFAQKHPSVISYDEKLSFYSKLGREVSEQPLTRDHDFIRLSVAPLVSAVKSEASSWVAAIGSYLNQSAKESLMELTNEIDDLSRKLQRTPDTLEDLKFVLHVIEDIRDSFVDYEVRYRDILERYRTLRMYGMDIPAEELALADSIEARCEELLQQAHEVDARLLPTKKHFTETTRTEVSDYTQDLDGLLHQFEDGGPAAVGEDLDRGVELLRKYQEVMQEKQRRREELVLAEKLFDLPITSYPQLFEMERKLNGLERIYGLYVRQKRAVEQWSNTLWTDLDIEVLIRGTDEFASELRNFPKELKQLPTYNIVHEKVTAFRDSIPLFSDLKNEALRDRHWKKLMALTGKTFNMSPDSFKLQNVFAMELHNYVDIISEITSGAIKELAIEKGLKAVDETWKRTSFDVVKYMKGTEERGFILSTIDEINTLLEDNVMNIQSMAASRFVESFREEVQNWEKRLSHISEVTEIWMNVQRKWMYLEGIFIGGDIRQQLPEEAKKFDLIDKSFKKIMTETNKNKNVLDACHVEDRLETLQRLLAQLESCQKSLSDYLESKRNAFPRFFFISDDELLSILGSDDPGAVQEHIIKMFDNVQSLKFGTGAASNVVSGMVSAEREEFVFRRQVTAEGKVEDWMKKVQEEMKRTNHAVTKEAVFQYPSMPRVPWIFANLGMVSLVAGQVWWTWEVEDTFRRVAEGDKMAMKTLSRKLGGQLQELVVQVRSDLTSNDRKKINTMIIIDVHARDIVDRFVRDSILDAREFEWESQLRFYWEKKPDTVVVRQCTGRFDYGYEYMGLNGRLVITPLTDRCYLTSTQALSLHLGGAPAGPAGTGKTETVKDLAKALGLLCIVTNCGEGMDYRAIGKIFSGLAQTGSWGCFDEFNRIDLSVLSVVAAQIQTIQRALNMRLKHFQFEGTEIALDGKMGIFITMNPGYAGRVELPQNIKSLFRPVVMVVPDLELICEIMLFSEGFELAKVLAKKMTVLYQLAREQLSKQNHYDFGMRALKSVLVMAGELKRGNPELNEDVVLMRALRDMNLPKFVFEDVPLFMGLIQDLSPGLDVPRVRYPSFNDAVEASLAESNYVLLPNQVDKVVQLYETMLTRHTTMVVGPTGGGKSVVVKTLAKAQTRLGLTTKLYTLNPKAVTVGELYGLLDPVKREWTDGLLSHIFREINRPLGAEKQERRYIVFDGDVDAVWVENMNSVMDDNKLLTLANGERIRLQKHCSLLYEVGDLQYASPATVSRSGMVYVDPKNLGYEPFYRRWCNMHQHRGQAETLWQMYEKYVQYCVNFVVDGVLEGGAHETRPRLAVPQTGLNLVTQLVTMLESILTEDKTHLNEQAIEAVFIFCLAWSMGASLLEDGRVKLDTLIKKLANMQLAARNAGLSQLPNGLPTLFDYHFDDAALRWRAWEDMVPEYAPPKDNKFYKILVPTADTVRSTWLLDKIVSTRKPVIFVGASGTSKTVTIQNYLRGLDSDRSLVVSISFSSRTTSLDVQKNLEANVEKRTKDSFGPPAGKRMLVFIDDLSMPSIDTYGTQQPIALLKLLIDRGGLYDRGKDLNWKYLRDVQFVAAMPTPGGGRNMVDPRFLSLFSVFNVTFPSESALRHIYTTILTEHLKPFSGEIAALAGKITEATLRLYGEIVNQLPPTPSKFHYIFNLRDLSRVYEGLTKATVDCFPTASHIVRLWRNECLRVFHDRLVSDEDRTFVQGRIGVALGEFFPDASEYAARNPILYGDYRRAMDPGGLRLYEDVDGYEVVKPIFEEILQEYNDKKTPMNLVLFDDAIEHLTRITRIITMARGHALLVGVGGSGRSSLARLSAFTCGYQMFEITLVRGYGEAEFKEDLKKLYGLVGMENKRVLFLFGDAQVAKESFLEMINNMLTSGMVPALYESDEMETIINGIRDEVAAKGLNPTKDNCWSFFVEKCADNLHIALAMSPVGDTLRQRCRNFPGLVNNTVIDWFTPWPEQALRSVADVFVSEEHVPKERRESVIQHMVKVHLSVANYSKDYQQRLRRTNYVTPKNYLDYVSNYLSLLRENRQSIEQQCKRLGSGLTKLIEASEQIKELEEKLKVQKVAVNEKTQACNALLEKISSSTKEAETKKEAAIAKEAELATQNQEISREKAEAEAALAEALPALELARLALQNLSNSDITEVRSFAKPPMEVQKVCECILVLRNIKEVSWKSAKSMMAAPDFRTQLMNLDVDAISNQQQKTVKQFLKDLDTTVERMREISAAGSGMLMFVEAIMGYCSVAKTVNPKRQAVARLEKNLHIATKDLQTIQAEVKRLQLDLAKLGEDYEKATSEQRSLKSEAELMERRLLAAEKLISGLGSEKVRWKQELEELKASRERLLGDCLLSAGFLSYTGAFTWEFRQRMVYEEWQADLREKEVPMSSPFTLESLLTNDVEISKWASEGLPSDELSVQNGILTTRANRWPLCIDPQQQAINWIRKKEGPNGLKICTFQDNDFLKQLEMAMTYGFPFLFKNVDEYIDPVIDPVLEKNVRTENGRQYIMLGDKQIDFDPNFRLYLTTKLANPNYSPAVFGKSMVINYTVTPKGLEDQLLNIVVGFERRELQEERERLVHEMSVNKSLLKDLEDLLLRELANSSGNMLDNAELIATLEETKSKADEVGEKLRKAHSTSKEIETARDEYRPAAKRGAVLFFAIAELSAINPMYQYSLASYLEIFDLSLKRSMPNPILPKRLENITDTLTTNVYNYACTGLFEAHKLMFSFHMTTKLMQAEGEMDPEELDFFLKGNLSLARSANPNPFPAWLPDSGWSDLQRLSTIGTVFSTLTEDIARHESEWHKWYALESPESAPFPLKYESAVSDFQRLCLLKCLRVDRVQPAFISFVIRRLGERYVTPPVLDFQQIYAQTTALTPVVFILSPGSDPATDLLKLADSLGFNTRLKFVSLGQGQGPVALQLLETAITRGQWLMLQNCHLLVDWLQHLERLLEKLEKPHPDFRLWLTTEPTERFPIGILQRSLKVVTEPPNGLKLNLRGSYTRVSEDVLDRCPHEAFKPLVYVLAFFHAVVQERRKYGKVGWNVPYDFNESDFRVSLMLLETYLTKAHDNNDTRIPWGSLRYLIGEAMYGGRVTDSWDRRVLMTYLDEYMGEFLFDTFQPFRFYHNSEVQYQVPQSGPKANYTEYIETLPLSNSPEVFGLHVNAEIGYLTNAVKEMWRNLIDLQPRSGDGSGGVTRESFIATIAKDIQSKLPELFDLQKIARGMGVPKPTQVVLLQEIERWNRLVTRMCVTLADLQKALAGEIGMNDELDEIASALFKGDIPATWRRLAPSTRKSLGNWMMHFIHRHAQYDDWVKKGDPVVMWLSGLHIPESYLTALVQTACRINGWPLDRSTLFTQVTEYINADEIRERPALGCYVTGLYLEGAAWSRDKGCLVRQKPKQIIDELPVMRIIPVESHRLKTQSTFTTPVYVTQARRTAMGDGFVFQSYLSTTEHPSHWIVQGVCLVLNTD* # ORIGINAL: g7560.t1 original gene structure, not modified by PASA NODE_728_length_18441_cov_41.9401 AUGUSTUS gene 312 2671 . + . ID=g7560;Name=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS mRNA 312 2671 . + . ID=g7560.t1;Parent=g7560;Name=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 312 431 . + . ID=g7560.t1.exon1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 312 431 . + 2 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 585 731 . + . ID=g7560.t1.exon2;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 585 731 . + 2 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 849 922 . + . ID=g7560.t1.exon3;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 849 922 . + 2 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 1167 1313 . + . ID=g7560.t1.exon4;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 1167 1313 . + 0 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 1625 1785 . + . ID=g7560.t1.exon5;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 1625 1785 . + 0 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 2066 2159 . + . ID=g7560.t1.exon6;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 2066 2159 . + 1 ID=cds.g7560.t1;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS exon 2561 2671 . + . ID=g7560.t1.exon7;Parent=g7560.t1 NODE_728_length_18441_cov_41.9401 AUGUSTUS CDS 2561 2671 . + 0 ID=cds.g7560.t1;Parent=g7560.t1 #PROT g7560.t1 g7560 FQRRMMALLSFTFRKLSPSLALELLEKNKGDLTNITNAKGLTGAEVDSRYTAYDMKRLDSYSRNLVDYHVVVDLLPQLARDWFLHRIPVTLSPVQAAILLSLGLQHRSVDELEAFLGLPASQLLALFNKSVRKLSQFLASVVETSVETGLSMPAAATPGDGKERKQKRPRTADEAGEMMEPIAQSLDDELKESSAEVKKQLKAKQTALVDNMDWQKYAISGNDAEWTDALKGGKIPSAISIKSGKEKTSKSGDGASKESKGKKAHKGSREESDERKSKKSRTR* # PASA_UPDATE: g4151.t2, single gene model update, valid-1, status:[pasa:asmbl_446,status:12], valid-1 # PASA_UPDATE: g4151.t1, single gene model update, valid-1, status:[pasa:asmbl_445,status:12], valid-1 NODE_1117_length_13817_cov_41.5245 . gene 7588 8264 . + . ID=g4151;Name=g4151.t2 NODE_1117_length_13817_cov_41.5245 . mRNA 7588 8264 . + . ID=g4151.t2;Parent=g4151;Name=g4151.t2 NODE_1117_length_13817_cov_41.5245 . five_prime_UTR 7588 7629 . + . ID=g4151.t2.utr5p1;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . exon 7588 7681 . + . ID=g4151.t2.exon1;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . CDS 7630 7681 . + 0 ID=cds.g4151.t2;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . exon 7810 7931 . + . ID=g4151.t2.exon2;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . CDS 7810 7931 . + 2 ID=cds.g4151.t2;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . exon 8049 8264 . + . ID=g4151.t2.exon3;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . CDS 8049 8087 . + 0 ID=cds.g4151.t2;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . three_prime_UTR 8088 8264 . + . ID=g4151.t2.utr3p1;Parent=g4151.t2 NODE_1117_length_13817_cov_41.5245 . mRNA 7588 8264 . + . ID=g4151.t1;Parent=g4151;Name=g4151.t2 NODE_1117_length_13817_cov_41.5245 . five_prime_UTR 7588 7629 . + . ID=g4151.t1.utr5p1;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . exon 7588 7681 . + . ID=g4151.t1.exon1;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . CDS 7630 7681 . + 0 ID=cds.g4151.t1;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . exon 7813 7931 . + . ID=g4151.t1.exon2;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . CDS 7813 7931 . + 2 ID=cds.g4151.t1;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . exon 8049 8264 . + . ID=g4151.t1.exon3;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . CDS 8049 8087 . + 0 ID=cds.g4151.t1;Parent=g4151.t1 NODE_1117_length_13817_cov_41.5245 . three_prime_UTR 8088 8264 . + . ID=g4151.t1.utr3p1;Parent=g4151.t1 #PROT g4151.t2 g4151 MAKAPATTTKKAKSPKKAAGGAKKTNPYNQFMKEELARIKAANPTIDHKVAFTQAASNWSKNKEKNAKKE* #PROT g4151.t1 g4151 MAKAPATTTKKAKSPKKAGGAKKTNPYNQFMKEELARIKAANPTIDHKVAFTQAASNWSKNKEKNAKKE* # PASA_UPDATE: g4153.t1, single gene model update, valid-1, status:[pasa:asmbl_447,status:12], valid-1 NODE_1117_length_13817_cov_41.5245 . gene 9843 12797 . + . ID=g4153;Name=g4153.t1 NODE_1117_length_13817_cov_41.5245 . mRNA 9843 12797 . + . ID=g4153.t1;Parent=g4153;Name=g4153.t1 NODE_1117_length_13817_cov_41.5245 . exon 9843 10283 . + . ID=g4153.t1.exon1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . CDS 9843 10283 . + 0 ID=cds.g4153.t1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . exon 11023 11290 . + . ID=g4153.t1.exon2;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . CDS 11023 11290 . + 0 ID=cds.g4153.t1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . exon 11434 11550 . + . ID=g4153.t1.exon3;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . CDS 11434 11550 . + 2 ID=cds.g4153.t1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . exon 11758 11897 . + . ID=g4153.t1.exon4;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . CDS 11758 11897 . + 2 ID=cds.g4153.t1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . exon 12186 12797 . + . ID=g4153.t1.exon5;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . CDS 12186 12743 . + 0 ID=cds.g4153.t1;Parent=g4153.t1 NODE_1117_length_13817_cov_41.5245 . three_prime_UTR 12744 12797 . + . ID=g4153.t1.utr3p1;Parent=g4153.t1 #PROT g4153.t1 g4153 MAAPRGPRITSFLFPVWILWSFVLSFLRFLAFGSSRRKEVVLLGADDIDADSLDALATGLELARAQELVISERRRAETLDDLSREVDGQLKNVDELLSLLKRARDGVEAAQRLRKAQNAQRTQDQTVDERHPKPAANVPLVWDWTLPRRLSLITNLGANAPKYVIGTKVYDPLKLEWVDVPSMGMGSPPTHVMTRDGSPRGVNDNASTLLSCETTVVGKESAVAPEDIRNIADLPTEVNGMVFDAISRSWIGNDDDGDLFDDDDAPADDAAGDCESHFPSDVGLALSDAERMQFRVDASKVNEQRWHWAEGDCPVACGAIREMSTVHLVTVMNRLAKLESEAAKVQGQPYASPLAHENDADSVHNVRTAVSPGNVSALSAWREDDDSEEDDTWLAYSDGDVVGSICLGIPSSKAPLCAAVHSVKPTAASSSSLRTNEDIVVGTDNNKKDAQTTTPLDGGGVRACTSTGGTGVGAILGCIAVGTKGTRERVVKFADAFEGSDDDESWD* # PASA_UPDATE: g4152.t1, single gene model update, valid-1, status:[pasa:asmbl_449,status:3], valid-1 NODE_1117_length_13817_cov_41.5245 . gene 8267 9464 . - . ID=g4152;Name=g4152.t1 NODE_1117_length_13817_cov_41.5245 . mRNA 8267 9464 . - . ID=g4152.t1;Parent=g4152;Name=g4152.t1 NODE_1117_length_13817_cov_41.5245 . five_prime_UTR 9426 9464 . - . ID=g4152.t1.utr5p1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . exon 9234 9464 . - . ID=g4152.t1.exon1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . CDS 9234 9425 . - 0 ID=cds.g4152.t1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . exon 8925 9033 . - . ID=g4152.t1.exon2;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . CDS 8925 9033 . - 0 ID=cds.g4152.t1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . exon 8605 8759 . - . ID=g4152.t1.exon3;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . CDS 8605 8759 . - 2 ID=cds.g4152.t1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . exon 8267 8436 . - . ID=g4152.t1.exon4;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . CDS 8344 8436 . - 0 ID=cds.g4152.t1;Parent=g4152.t1 NODE_1117_length_13817_cov_41.5245 . three_prime_UTR 8267 8343 . - . ID=g4152.t1.utr3p1;Parent=g4152.t1 #PROT g4152.t1 g4152 MCWPCADEDMADESAALTAAAAHKSTGQQPQPHPMHAREGRSNQRFDNGIRQVAGCVAVRDGTHVLLVTSRNIARPKSWILPKGGWENDESVEEAALRETWEEGGVKGEITAFLGAHEKIGKRKQQRFHMYELKVTEEHEQWPEMKKRQRKWFTFTEAVEACDRPAMIQVIRTVARKYGHTI* # PASA_UPDATE: g4150.t1, single gene model update, valid-1, status:[pasa:asmbl_444,status:3], valid-1 NODE_1117_length_13817_cov_41.5245 . gene 4769 6627 . + . ID=g4150;Name=g4150.t1 NODE_1117_length_13817_cov_41.5245 . mRNA 4769 6627 . + . ID=g4150.t1;Parent=g4150;Name=g4150.t1 NODE_1117_length_13817_cov_41.5245 . five_prime_UTR 4769 4965 . + . ID=g4150.t1.utr5p1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . exon 4769 5030 . + . ID=g4150.t1.exon1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . CDS 4966 5030 . + 0 ID=cds.g4150.t1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . exon 5162 5401 . + . ID=g4150.t1.exon2;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . CDS 5162 5401 . + 1 ID=cds.g4150.t1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . exon 5642 5707 . + . ID=g4150.t1.exon3;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . CDS 5642 5707 . + 1 ID=cds.g4150.t1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . exon 5903 6054 . + . ID=g4150.t1.exon4;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . CDS 5903 6054 . + 1 ID=cds.g4150.t1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . exon 6285 6627 . + . ID=g4150.t1.exon5;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . CDS 6285 6397 . + 2 ID=cds.g4150.t1;Parent=g4150.t1 NODE_1117_length_13817_cov_41.5245 . three_prime_UTR 6398 6627 . + . ID=g4150.t1.utr3p1;Parent=g4150.t1 #PROT g4150.t1 g4150 MDDIDDLLDEVEATIFKDKKASQAKGSTTSKGSVVTKSSNSASNNISKASTGGRGASGLKGYFSDSDEDDEPARPAPVSQTRSDSFSKLQRLPSNVSKEQTKCFPVFIGPPSVPQGMTRSSTMPATCDRLRCTACDFRIVSFQDYTWSSSCDYLFFRNNVPDFNKLKVNLLRRAGTTAYACQCKWRSVDKLKNVADDVDLKWVCGRHSNAK* # ORIGINAL: g4149.t1 original gene structure, not modified by PASA NODE_1117_length_13817_cov_41.5245 AUGUSTUS gene 851 4259 . + . ID=g4149;Name=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS mRNA 851 4259 . + . ID=g4149.t1;Parent=g4149;Name=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 851 991 . + . ID=g4149.t1.exon1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 851 991 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 1278 1390 . + . ID=g4149.t1.exon2;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 1278 1390 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 1563 1685 . + . ID=g4149.t1.exon3;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 1563 1685 . + 1 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 1912 2005 . + . ID=g4149.t1.exon4;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 1912 2005 . + 1 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 2155 2212 . + . ID=g4149.t1.exon5;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 2155 2212 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 2359 2438 . + . ID=g4149.t1.exon6;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 2359 2438 . + 2 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 2603 2691 . + . ID=g4149.t1.exon7;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 2603 2691 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 2994 3099 . + . ID=g4149.t1.exon8;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 2994 3099 . + 1 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 3323 3469 . + . ID=g4149.t1.exon9;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 3323 3469 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 3605 3665 . + . ID=g4149.t1.exon10;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 3605 3665 . + 0 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 3816 3921 . + . ID=g4149.t1.exon11;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 3816 3921 . + 2 ID=cds.g4149.t1;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS exon 4085 4259 . + . ID=g4149.t1.exon12;Parent=g4149.t1 NODE_1117_length_13817_cov_41.5245 AUGUSTUS CDS 4085 4259 . + 1 ID=cds.g4149.t1;Parent=g4149.t1 #PROT g4149.t1 g4149 MQTIKKVVGDTVDMFKNPDVSRDKLSTTSNVKYSNETMTACEWHGKEDMRINTERPKPMVNEPHDAVIRVTATTVCGSDLHLYLNELPSVCPIIAGDILGHECMGIVEDVGDAITEFKRGDRVVVSAVIADGTCSYCKSGMPSLCDTTNPSSECEKNYGHRTAGLFGYSRLTGGYDGGQAEYIRVPFADFNLLKVHASVPDEKALFLSDIIATGWHANELAEVREGDNVCIWGAGPVGLMAAKWALFRKARRVLVIDHEPYRLEVARKIGCETLDYNDKDPYVEVPKLMIGGPDRCIDCVGFRFAKTISHRIQRALHLEGDALDVVDEMVTLCRKGGNIALIGDYFGRGNRFPIGAMMEKAITVRGGQLYVQKYWKELLGYIEEGKFDPTFAITHRFKLEETPKVYKMFNAHADNIIKPFIKVGKPASEE* # PASA_UPDATE: g1320.t1, single gene model update, valid-1, status:[pasa:asmbl_6175,status:12], valid-1 NODE_3527_length_3269_cov_35.4483 . gene 177 3145 . + . ID=g1320;Name=g1320.t1 NODE_3527_length_3269_cov_35.4483 . mRNA 177 3145 . + . ID=g1320.t1;Parent=g1320;Name=g1320.t1 NODE_3527_length_3269_cov_35.4483 . five_prime_UTR 177 177 . + . ID=g1320.t1.utr5p1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 177 233 . + . ID=g1320.t1.exon1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 178 233 . + 0 ID=cds.g1320.t1;Parent=g1320.t1;5_prime_partial=true NODE_3527_length_3269_cov_35.4483 . exon 407 992 . + . ID=g1320.t1.exon2;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 407 992 . + 1 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 1268 1495 . + . ID=g1320.t1.exon3;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 1268 1495 . + 0 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 1742 1828 . + . ID=g1320.t1.exon4;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 1742 1828 . + 0 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 1981 2125 . + . ID=g1320.t1.exon5;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 1981 2125 . + 0 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 2490 2635 . + . ID=g1320.t1.exon6;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 2490 2635 . + 2 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . exon 2923 3145 . + . ID=g1320.t1.exon7;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . CDS 2923 2991 . + 0 ID=cds.g1320.t1;Parent=g1320.t1 NODE_3527_length_3269_cov_35.4483 . three_prime_UTR 2992 3145 . + . ID=g1320.t1.utr3p1;Parent=g1320.t1 #PROT g1320.t1 g1320 IPRSENNKKVFVPRESLLSELFQVEHFRTIFNLFVAMLVVFGVQTLVSDIFDNKPFIDMSLVAYTFGQADVVMFTWVGLFLQTLSLYAFVISYGNSKSLPNWTWLMFYGWYQLALFLWPMYVTLSYGLPPASALIVLCEQTRLHMKSHSFIRENIPQLMAARRNSNHTSPETRMMVPTFSHYIYFLFAPTMLYRPSYPRTSVIRWRVVFANFGQVIGCLFYTFIVFARYARPMFKNSGLEPIDLRSFVLTVFHSMLPSQLIFFMAFFAILHSWLNGWAEMLRFADREFYKDWWNARNFSTYYRKWNAVVHDWLFAYTYQDAMHFLKMSRHSAMLTVFMWSAIVHEYILACALGYFFPVLLGMFGGIGVWFIYLTKNRNTRVWNVFMWVMLFFGNGLLMVLYCVEFYARQNLPRHPDESAIHFFFVPRVVSLKWNNNLF* # PASA_UPDATE: g7545.t1, single gene model update, valid-1, status:[pasa:asmbl_6221,status:12],[pasa:asmbl_6222,status:12], valid-1 NODE_3562_length_3199_cov_38.0483 . gene 357 3131 . - . ID=g7545;Name=g7545.t1 NODE_3562_length_3199_cov_38.0483 . mRNA 357 3131 . - . ID=g7545.t1;Parent=g7545;Name=g7545.t1 NODE_3562_length_3199_cov_38.0483 . exon 2934 3131 . - . ID=g7545.t1.exon1;Parent=g7545.t1 NODE_3562_length_3199_cov_38.0483 . CDS 2934 3131 . - 0 ID=cds.g7545.t1;Parent=g7545.t1 NODE_3562_length_3199_cov_38.0483 . exon 2251 2507 . - . ID=g7545.t1.exon2;Parent=g7545.t1 NODE_3562_length_3199_cov_38.0483 . CDS 2251 2507 . - 0 ID=cds.g7545.t1;Parent=g7545.t1 NODE_3562_length_3199_cov_38.0483 . exon 357 1851 . - . ID=g7545.t1.exon3;Parent=g7545.t1 NODE_3562_length_3199_cov_38.0483 . CDS 357 1851 . - 1 ID=cds.g7545.t1;Parent=g7545.t1;3_prime_partial=true #PROT g7545.t1 g7545 MLESLLPRESSSKEIDAALLSVISFPAFAVEDEALAERTKHRIVRKLRGRYGCKRFLRDGYKTVVEDTRRLHYEPEELKVFENIECEWPLFLIFLIIDGVFRSNRAQVDEYWRLLEPLLTTNSDGNETIPELYYVPAEKVHAEYAAPHSQDRIPGGKHQLMWGQSLYVLARLIDGGHINVGEIDPLNRRRVMAGRPDLLLQVVVLASTERVRDELAKIGVSAQTAHDMLPVTVLPGSKLSKAYSDLGRSPSLGLTGRPRGSVGSLSTCKLYRHHGRLYAFTPQFLDGNQFYLSLDNEFLVDNIKTHLAWIRTNWRVIGRPTLTIMVTEDTLFGTCGPQQMGIDGGTGAGPLSAVIGALQQQQQQPSQLFPQLQPQQQQQQQQQLGTSQPLWHRGCMAKLLVLMTSGLCDGVRVRIGTVQDHLTTSCVEELTFVTGRAFPTVFKLQSPGTRSLLNLDQEKSLSRSRKQSTTSTDASKNSSDDSDWEGGADDYAGDEHDPAAHATSGGAGSAMGDSPRRKKRRSKPATTATVGRILKGSPTPTEHATPTITAATHVHIDVPSISVDGGDDGLVPHSPSAAHTGKRGSRPTSRKSSVYGIVLKSRNMSQQDDAGRVAWRDYKDVSIDDVVQQLGRSNALQDQLDMLHYLYMAK # ORIGINAL: g6835.t1 original gene structure, not modified by PASA NODE_3964_length_2441_cov_39.3047 AUGUSTUS gene 1575 2292 . + . ID=g6835;Name=g6835.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS mRNA 1575 2292 . + . ID=g6835.t1;Parent=g6835;Name=g6835.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS exon 1575 1747 . + . ID=g6835.t1.exon1;Parent=g6835.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS CDS 1575 1747 . + 0 ID=cds.g6835.t1;Parent=g6835.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS exon 2035 2292 . + . ID=g6835.t1.exon2;Parent=g6835.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS CDS 2035 2292 . + 1 ID=cds.g6835.t1;Parent=g6835.t1 #PROT g6835.t1 g6835 MEAEADAVDNALRQIAQLFQRPEQLEKLEQHRTRLYRTKASVDVRLKQALQSQVDDIRTGLELLNKALESVQSVRSNLSSIDDLCQQCRPLSVDMAQYKMVNDARKTMFNTKENLERIFTVPDTVKQLKALLEQDDSNLLQVH # ORIGINAL: g6834.t1 original gene structure, not modified by PASA NODE_3964_length_2441_cov_39.3047 AUGUSTUS gene 250 853 . - . ID=g6834;Name=g6834.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS mRNA 250 853 . - . ID=g6834.t1;Parent=g6834;Name=g6834.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS exon 781 853 . - . ID=g6834.t1.exon1;Parent=g6834.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS CDS 781 853 . - 0 ID=cds.g6834.t1;Parent=g6834.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS exon 250 371 . - . ID=g6834.t1.exon2;Parent=g6834.t1 NODE_3964_length_2441_cov_39.3047 AUGUSTUS CDS 250 371 . - 2 ID=cds.g6834.t1;Parent=g6834.t1 #PROT g6834.t1 g6834 MGVGGGSARVVRGSAGDSDSLDSGGLARRTSFDNLLPTSDGGVAAERWAAEEESGRPRTCWARVK # PASA_UPDATE: g2948.t1, single gene model update, valid-1, status:[pasa:asmbl_7993,status:12], valid-1 NODE_5304_length_917_cov_44.1496_potentialcontaminant . gene 1 736 . - . ID=g2948;Name=g2948.t1 NODE_5304_length_917_cov_44.1496_potentialcontaminant . mRNA 1 736 . - . ID=g2948.t1;Parent=g2948;Name=g2948.t1 NODE_5304_length_917_cov_44.1496_potentialcontaminant . exon 1 736 . - . ID=g2948.t1.exon1;Parent=g2948.t1 NODE_5304_length_917_cov_44.1496_potentialcontaminant . CDS 1 736 . - 0 ID=cds.g2948.t1;Parent=g2948.t1;3_prime_partial=true #PROT g2948.t1 g2948 MCCINILCRSAPPGCPEFRIPALTEPQQRALREVAIEIVQKVAGEAFEKEADIRRLVDKYTALVDEHTATDASEKSRASAQNSTEMQAVLTEANDQATLSDLSARATAYSKIAAALQHDAVLLKQFLDSTCMSFQAFASRYRPLLRASSSVISMSDWASVRCALFADANRVTLRPSMFTEIVRIEPSAYNELERRLSEMAVIVQALVRGFLVRRRISRHMLGTLKSHGFVGFSRAMNDSREFEVT # ORIGINAL: g2808.t1 original gene structure, not modified by PASA NODE_8689_length_359_cov_26.3627_potentialcontaminant AUGUSTUS gene 2 359 . + . ID=g2808;Name=g2808.t1 NODE_8689_length_359_cov_26.3627_potentialcontaminant AUGUSTUS mRNA 2 359 . + . ID=g2808.t1;Parent=g2808;Name=g2808.t1 NODE_8689_length_359_cov_26.3627_potentialcontaminant AUGUSTUS exon 2 359 . + . ID=g2808.t1.exon1;Parent=g2808.t1 NODE_8689_length_359_cov_26.3627_potentialcontaminant AUGUSTUS CDS 2 359 . + 0 ID=cds.g2808.t1;Parent=g2808.t1 #PROT g2808.t1 g2808 DAAGDKCPLPVRVRFPAEVSQNASPSSRSLPVSSTGGNNATLTIASHPPSPISGRGSMEEKDVRGDKSSTTNMSDSTDSAADAVEDAVQKSRTIASEYSRNMMAAGVLSPSSTGAFVVG # ORIGINAL: g13967.t1 original gene structure, not modified by PASA NODE_5095_length_1025_cov_48.2095 AUGUSTUS gene 2 970 . + . ID=g13967;Name=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS mRNA 2 970 . + . ID=g13967.t1;Parent=g13967;Name=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS exon 2 228 . + . ID=g13967.t1.exon1;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS CDS 2 228 . + 2 ID=cds.g13967.t1;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS exon 433 547 . + . ID=g13967.t1.exon2;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS CDS 433 547 . + 0 ID=cds.g13967.t1;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS exon 767 815 . + . ID=g13967.t1.exon3;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS CDS 767 815 . + 2 ID=cds.g13967.t1;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS exon 937 970 . + . ID=g13967.t1.exon4;Parent=g13967.t1 NODE_5095_length_1025_cov_48.2095 AUGUSTUS CDS 937 970 . + 1 ID=cds.g13967.t1;Parent=g13967.t1 #PROT g13967.t1 g13967 CVAEGEFGEVYLADVALQGGAAAAIKAAVKTFKVTSLSTVDDIRSARSAFMAEIDLMRTIPAHTNIIRLIGVCTQSEPNCMVMEYAEHGDLRHFLLDKKAVDFTATDLLCFCIDIARGVEHLAKCQIVHRLAHVVTQVSQ* # ORIGINAL: g9606.t1 original gene structure, not modified by PASA NODE_4205_length_2030_cov_35.3944 AUGUSTUS gene 223 1726 . - . ID=g9606;Name=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS mRNA 223 1726 . - . ID=g9606.t1;Parent=g9606;Name=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS exon 1566 1726 . - . ID=g9606.t1.exon1;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS CDS 1566 1726 . - 0 ID=cds.g9606.t1;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS exon 1133 1271 . - . ID=g9606.t1.exon2;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS CDS 1133 1271 . - 1 ID=cds.g9606.t1;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS exon 576 692 . - . ID=g9606.t1.exon3;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS CDS 576 692 . - 0 ID=cds.g9606.t1;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS exon 223 375 . - . ID=g9606.t1.exon4;Parent=g9606.t1 NODE_4205_length_2030_cov_35.3944 AUGUSTUS CDS 223 375 . - 0 ID=cds.g9606.t1;Parent=g9606.t1 #PROT g9606.t1 g9606 MNFDTYGPNEFECKEKDGAVTFFGILSKVQVEAMMWGMGTALGELPPYFISRASAMAGVRNEEIEELLHSTDTSLKTRIAKTLERLVERAGFWGILLCASIPNPLFDLAGITCGTFMVPFATFFGATLIGKALIKANLQTVFVISAFSPTVIESAVTFLGEINESLGAYVQSQVKAFHSSFHHHNDHHKQ # ORIGINAL: g5514.t1 original gene structure, not modified by PASA NODE_476_length_23006_cov_41.0159 AUGUSTUS gene 776 4880 . - . ID=g5514;Name=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS mRNA 776 4880 . - . ID=g5514.t1;Parent=g5514;Name=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 4143 4880 . - . ID=g5514.t1.exon1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 4143 4880 . - 0 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 3758 4056 . - . ID=g5514.t1.exon2;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 3758 4056 . - 0 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 2207 3586 . - . ID=g5514.t1.exon3;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 2207 3586 . - 1 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 1722 2007 . - . ID=g5514.t1.exon4;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 1722 2007 . - 1 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 1460 1514 . - . ID=g5514.t1.exon5;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 1460 1514 . - 0 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 1139 1203 . - . ID=g5514.t1.exon6;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 1139 1203 . - 2 ID=cds.g5514.t1;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 776 883 . - . ID=g5514.t1.exon7;Parent=g5514.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 776 883 . - 0 ID=cds.g5514.t1;Parent=g5514.t1 #PROT g5514.t1 g5514 MLSSVADVHALATSGGISMQSPEGPTCACVNHRTMRIAIVAHGTKDDTFWDLVQLAAVQAGRDWRVEVTWFRPNTFDVAVQAASIRAAVDDASVSAIIITYSSATGNLIADAISYSVAKGKPIASINSIPTNLDVLGAGLLFHIGQREFVAGLSSGVKFKSLGVQKPMFLIHEASNVGLLARFDGLTTTYNVSVSSKLPTLVQVSKTNSDAGIASAVAAIMADTEIDGIMCSAVSLPYAFAARDAAQQQVQGGYAVILMAVYLATGQLPLNGYLESGPGFVSLETSKLYKCASQLSVNHRQEDCVAGTCPCVNDRTCTVTIECRAVPKYNLTISFVGHGLNSDPLWDHIARGAAVAADMFHVRLNFVRPLRKSFIDQRSSIDLAVPASDGIVVSLPQIEDTNAPEDESKNVIKFAVRRALAAGRPVVSVNAGLALSRSLGLMTHVGMDDVKAGDTLAVKVVTEKGHDPTCILIVNPDAASPSFADRASGFISRAALLAAPSAVVSGAAMVIETGTGGLQLFVNGEDTTSSRSRVAAALTLRTNVSAIVCLGRAAYLSVRAELGRLNRLTNRIGALGSNANAAGIAVFVMDAEDDILQDVRTGAVAYAVDQQGFLQGFLPVFFLAHSLVTHNALFASHVMTGPRMIDYSVLGNMTSKGHACASPSNIGADCPCVAGAIPTGTVDQCAVCPAGKYGLDGTSCLACPVGSACPVAGLTLSTMQSCSAAQTPGTIACPPSGGSSQITVAIVAPIVATLGCVIAVIAAVWLFGYRRRARDDAALKAFLMVPVEEIEFLEIVGTGSFGVVRRSLWRGSIVAVKTMKVALASDDLAAPASDRSSFGKTALWVSSVRFRGTLTSLFKGGGPRSGSRVGPGSSREVLISSFMEEARVQMSLRHPNIVLMMGANLFVEDRLIISEFMSRGSLRDVYRDDGVRLDERLKLAIAMDIVQGMEYLHSANPPIIHNDLKVLPGMTFALKR* # ORIGINAL: g5518.t1 original gene structure, not modified by PASA NODE_476_length_23006_cov_41.0159 AUGUSTUS gene 17255 22883 . + . ID=g5518;Name=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS mRNA 17255 22883 . + . ID=g5518.t1;Parent=g5518;Name=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 17255 17429 . + . ID=g5518.t1.exon1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 17255 17429 . + 0 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 17743 17860 . + . ID=g5518.t1.exon2;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 17743 17860 . + 2 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 17991 19207 . + . ID=g5518.t1.exon3;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 17991 19207 . + 1 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 19548 19696 . + . ID=g5518.t1.exon4;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 19548 19696 . + 2 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 20042 21556 . + . ID=g5518.t1.exon5;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 20042 21556 . + 0 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 21722 22309 . + . ID=g5518.t1.exon6;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 21722 22309 . + 0 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 22517 22750 . + . ID=g5518.t1.exon7;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 22517 22750 . + 0 ID=cds.g5518.t1;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 22878 22883 . + . ID=g5518.t1.exon8;Parent=g5518.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 22878 22883 . + 0 ID=cds.g5518.t1;Parent=g5518.t1 #PROT g5518.t1 g5518 MKRKPTKKEAAERIRPSREWPRGAPAATNTTEMAPPRLATAFVALAILALSASSSPNKLPARVPPVAVPFRTLAREGHPPPPGQDDDTVCLYMGDACEIYVPLKSQRIDFTADKETLYHVLAADDDGVLYAATAFLRLPADRSGSGGVLNGTCQRVVKVTALRPMPSVENSTSPITSLDTLFSETIYEDDMTCATARADFAEVTNFVSLRDGLFSLFVCTPSTFCELNVFRVVKNESMSSGTLHGASWSGAPGSSESWRVDMLARVPVLAPLAQRFFVWAEALSGGNSALVYDAHADVTAGVDPATAALHHRLVTWAVGADGRMAGNVTESASMVLPNVMRASVGETGAGSASVRAPMHASVLCTDKPDSNRQMSTDCRCDASPVADAPTNSPMFVFAGDSLTMHNNCTTSRVDWIIRTTRRTTVVTLASLVPGQTHTHTYTLDELASLAIGDTLYLVKLVHETTAADSAVVIDSSANALMYPSGLLFHFIAVKPNDDFTSSQVTFGLGGEQTRRHTAVTCNNRWNALRVSGFSFIARCPTVAPFDRGAFVIAISTGLKANDTTPLTLTRVLAAAQSSANSRDSVAAIISNFAAADLNYDDAIDTTEAQKYCDTQGFATFSVPTDHSGGDLYYGSVSRGVGIFLFRNKQSLSESDNGRVVRRDSPGSVSTPSENVPLESENAKSFGRRSGQGTSYHGSRTSMHSDAHVGRRSTSINGEVQPYIAVVCVCVYGWCGWTDAPEGWDMFETVLGVSTVPYFPPPPATGPPPPLREYTWPALVVVATTRSARIFKVTTGSSLTSRTPVVLQHYATVSASKSPFHSPFRVVAPPTIFRNMMLFANTEGQAPDAASVEIGRLRACPAGLGITPEGTCSVCVPGTYKPDGDAFGVCTPCEQGSYAPEPQRSTCDKCAVGAYSLSGAALCTACPSGAETVLNDMNAPLPWCLPCAAGSFRALGMDRCEICADNSDDSGDSGDNTIGTTPNVQGIRCPAGSAANAVTSMQSASTATLYPDTSVDYNAATMSSTLRNVYIAVFASVLCSMALVVVLVALRPSNETIARVACVVDLYGADERFVLEAVKKGVHAVDPSACVERQRRTSLLIGLAMTALFVAGALAIVAGTIASEYDGSNDYLYQQPPQYPQSGALFTQFVDEKIRADSRPYTVTIDLHGWAGDCNPGVISATFDASTTGATTGSRSANVVSAATAVRATDGLVTCAVRVRAGPASSPGGVGNVVVDRLSVRLSARSPFAQAIGWGVNYAVDGSPDRSALHQVTVPVAPPLSDDAENRWVACNASFTVDDVVALYDRKGLVQSGHVLVVDPVASRVDACDPSQQH* # ORIGINAL: g5516.t1 original gene structure, not modified by PASA NODE_476_length_23006_cov_41.0159 AUGUSTUS gene 6798 12590 . + . ID=g5516;Name=g5516.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS mRNA 6798 12590 . + . ID=g5516.t1;Parent=g5516;Name=g5516.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 6798 12590 . + . ID=g5516.t1.exon1;Parent=g5516.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 6798 12590 . + 0 ID=cds.g5516.t1;Parent=g5516.t1 #PROT g5516.t1 g5516 MSAAHVSVSAGERPSSARTRLDPLDQAPVARPVPDDTCERVLASAPAQPTADLVSLGIARRALVAESIARRGTYDGDCERLRFQVREAIAALAREMRLWLSAKVASKPRKGSVFEWLVNLPASIASCSACAGSLSLRQSDIEWLVRKCMSSLLVLLASREEQIAHVIRKRISVEECDGHLERIGRLSGYVVPSIENDWLAAFSRARIGPTDVADYLLALSVYTTDCSTRDEVDGWEHSGREGWRPPTIPARIDIHGPNASPWAVMNWTLRVTHDASAPANVRALAAESFVPFSLLRDRIDEALAILPKVRTVVYRGVNIPGLSYRYAPALPVVFPPFTSTSTVGTEAREYVKDDGTFFVIRSHSAAFIDFVSFLPAESEKLLPTFSRFSVLQKTSTTVLRMLGCRYDIVTLAEDGDVDATDTETVKAFARSVRETRFIYEAYLRETYVEGRIGPTPPPCSTSVGLFTSLSSWCDGDRNLLLLGVGGSGKTSAVLAAYCRLAERDGLLPVFVPLPLVSGLLETDGALDAYLCQALRLTAPQLDLLGKLFKLVLLLESLDEVRIPLGLSPIDVKDRILRLVARNSFCARKRIMLSCRDEFLSRYGLLPSDLFGRHGEVRYVQPFMDSDVSAFCEKQCAKTGLTGERKTKKIAAVDALRLALREALSNPCVLHMACRTDDARIHAMIEGAGRIPSACVYEAHLLQEMEGSDVALQAMQALAVSMLNRNEWHVSVRDVASAFADFGVSAATFRASFFPRIPRRVENDGDDSASFAWWHKSIGEYLASRALWRAPEDSLGAVGRAFSLDTPAVLSFFGSMALLSPAHCAELCNRVMVPAVLNSRVADDTRARARASNALALLCASGHVLAGRDLANIVIEDANLEDAWLHGVLLRGAVFRRCNLARACFDFADVTDVQFPHSTCELALRPFVGHTDALTKVLYSPDGLFIASASADKTIRRWNSSTGKEEGVFRGHAAAVTCLDISASGTMLISGSTDRTVRIWDVAAVKEIRSVRGHLQEVTGVCFAGEDKVFVSASVDFSVKVWDLSTCTELRVMRAHESAVGSLCASPDGKYVASGSAEGSTVRLWDVTTGRTVHVIKGKGNAGCFSADGKLLLGESNSSVYMYEMATGETVRWLTGHSDRVTALSVSADGKYVATSSKDGTVRLWNSVTAGEVASLRGHRGDVTCVCFSPSAKNIASGSIDGTLRVWNSASGSSVRRLDGPGEIVTCVRMSHDGRLVATASDVQILRMFDAMNASELWSVCAGGQPCTAQPDSRRAVLCFSHDSKHIAAIQARPSAAAGNAVNLFHAGTGALVWSQPVTCDVTCVCYSADGRLLGCGLMDGSARVLDVSDGTVRGVLEGMSGAVTQLCFTADGAFLVGGSSGGRATCTWNISTKAIVSPPVPTHTITAVCFTSDNKSVVCVSAGDTLIRVWDFATGKLLKTIAGTTSSPSGVSVSSDGKMLTCVTREDANLTLRQWNTVTWKVTRDVTAGKKAAAHTLAQLTSDGKYAVSAGGQADRKIRMWDAATGKEVRFFKGPENGVSAIGLSSDGETLVASSRGGSIRVWTVTNGRGIGAFDIEGSASPLCVCVAGSGRRVVAGMSDHCVLALDLDTGAIVHTLLGHHSSVTFIATCPDGGRVVTAAETDLEARVWDILKGCEVTVLSGHTAAVTSLCFSPDGKCIATGSRDRTVCLWDAFTGARVQTIEYQPTFLPISGLVRGPGESIVACGNLGSLIRTWSLSTGAMMNSSTSITPVNISGVRMFELSPDGALVVGALSDKGIALWDALTGSVVWAMDGHAQPITSASFACGVSRLITAAADKSVRVWNLSDVTRKYALPPSMKGIVKDATRREEGVLTRIHYANGVATSSSPSTALLNDEKTAPIAPGPFPLVSLIQRQSFFSCDNVVGSPKACDGMSPGLYSAFEGRLKTTHA* # ORIGINAL: g5515.t1 original gene structure, not modified by PASA NODE_476_length_23006_cov_41.0159 AUGUSTUS gene 5864 6595 . + . ID=g5515;Name=g5515.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS mRNA 5864 6595 . + . ID=g5515.t1;Parent=g5515;Name=g5515.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 5864 5941 . + . ID=g5515.t1.exon1;Parent=g5515.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 5864 5941 . + 0 ID=cds.g5515.t1;Parent=g5515.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 6347 6595 . + . ID=g5515.t1.exon2;Parent=g5515.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 6347 6595 . + 0 ID=cds.g5515.t1;Parent=g5515.t1 #PROT g5515.t1 g5515 MHRAKINPARMKEKAELNVLPREVRTVADNYNHLHEQPVLFYALVFYSHLAGTADSTSTLLAWAYVAFRVLHSIHQATVNFIPLRFALFVFGSLCLFVLTGQQVAALI* # ORIGINAL: g5517.t1 original gene structure, not modified by PASA NODE_476_length_23006_cov_41.0159 AUGUSTUS gene 14384 16078 . + . ID=g5517;Name=g5517.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS mRNA 14384 16078 . + . ID=g5517.t1;Parent=g5517;Name=g5517.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS exon 14384 16078 . + . ID=g5517.t1.exon1;Parent=g5517.t1 NODE_476_length_23006_cov_41.0159 AUGUSTUS CDS 14384 16078 . + 0 ID=cds.g5517.t1;Parent=g5517.t1 #PROT g5517.t1 g5517 MRVTPYARPTWWTCVPMRVRMTGLLLTTACRRRVRVCISFLLATAIGAGLYARLAFPPHPYDYATHGIAGAEPWFNGSDGVYSLTIDDCFQSFCLDPLLAPLEDRGFTTTVYPTLNGLFPFHCLPSPWLGEWGPAHAAFSLEEIHRGMDAVDEWLQQNNATVLEAAADIASVCEAMEGRRMVACPYRADVDCKEIADAIVVAVKRLRGAIEQGHEVGSHGVLHAQMTNLAADSLALEIDGSAWWLTAILDAPALRTFSYPHTKTDTHVIAATIGRFFGARCGGNGVCTVPSDTQTAGFGIQARFMDSSAEDNNAYAARAARERSWMVATVHGVGTHGFLPVPEDAYAAHFEWVRGERDAGRLWVDSFGRVLQYARLRDTLMVSTVDELLFLPRYHGERDHGIKQATTWKDDAAHDRHGQHHDNHDNGHGDGRHNAHDGQRGGGSGSASILISRAIASPALGCLPADESSTWPLMSVFIVSEGPACVNSMRQLSASVLYIPERVSNTKGQPNVVSVQRIPLPPVPTLFGNFRSKPLAGERCKFMVTALPPEAGGSAVATINIEWS* # ORIGINAL: g3058.t1 original gene structure, not modified by PASA NODE_20008_length_151_cov_254.513_potentialcontaminant AUGUSTUS gene 1 131 . - . ID=g3058;Name=g3058.t1 NODE_20008_length_151_cov_254.513_potentialcontaminant AUGUSTUS mRNA 1 131 . - . ID=g3058.t1;Parent=g3058;Name=g3058.t1 NODE_20008_length_151_cov_254.513_potentialcontaminant AUGUSTUS exon 1 131 . - . ID=g3058.t1.exon1;Parent=g3058.t1 NODE_20008_length_151_cov_254.513_potentialcontaminant AUGUSTUS CDS 1 131 . - 0 ID=cds.g3058.t1;Parent=g3058.t1 #PROT g3058.t1 g3058 MESTLLAAKKAASSNPLFGGVAIHHYLSYFALKAGVNKGDSID # PASA_UPDATE: g4227.t1, single gene model update, valid-1, status:[pasa:asmbl_1699,status:3], valid-1 NODE_1472_length_11085_cov_41.4799 . gene 3911 5126 . - . ID=g4227;Name=g4227.t1 NODE_1472_length_11085_cov_41.4799 . mRNA 3911 5126 . - . ID=g4227.t1;Parent=g4227;Name=g4227.t1 NODE_1472_length_11085_cov_41.4799 . five_prime_UTR 4873 5126 . - . ID=g4227.t1.utr5p1;Parent=g4227.t1 NODE_1472_length_11085_cov_41.4799 . exon 4744 5126 . - . ID=g4227.t1.exon1;Parent=g4227.t1 NODE_1472_length_11085_cov_41.4799 . CDS 4744 4872 . - 0 ID=cds.g4227.t1;Parent=g4227.t1 NODE_1472_length_11085_cov_41.4799 . exon 3911 4593 . - . ID=g4227.t1.exon2;Parent=g4227.t1 NODE_1472_length_11085_cov_41.4799 . CDS 4240 4593 . - 0 ID=cds.g4227.t1;Parent=g4227.t1 NODE_1472_length_11085_cov_41.4799 . three_prime_UTR 3911 4239 . - . ID=g4227.t1.utr3p1;Parent=g4227.t1 #PROT g4227.t1 g4227 MTVRSITLPIINSVSCPQSAALPVTTRVPPNFVTGRRHLEKLQCNNATWLDTYVQTMFSPSTAGPATGSTGVSAATVPSSAAATFPRVSANQRGNVTTEGGFCPLRGLPLPPIPGGHYVSVGVGPDMYGRGKDLSVSGRSLATAPERQSRKRARSLSTRT* # ORIGINAL: g4228.t1 original gene structure, not modified by PASA NODE_1472_length_11085_cov_41.4799 AUGUSTUS gene 6425 10245 . - . ID=g4228;Name=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS mRNA 6425 10245 . - . ID=g4228.t1;Parent=g4228;Name=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 10192 10245 . - . ID=g4228.t1.exon1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 10192 10245 . - 0 ID=cds.g4228.t1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 9975 10037 . - . ID=g4228.t1.exon2;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 9975 10037 . - 0 ID=cds.g4228.t1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 9753 9838 . - . ID=g4228.t1.exon3;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 9753 9838 . - 0 ID=cds.g4228.t1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 6897 9670 . - . ID=g4228.t1.exon4;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 6897 9670 . - 1 ID=cds.g4228.t1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 6667 6703 . - . ID=g4228.t1.exon5;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 6667 6703 . - 2 ID=cds.g4228.t1;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS exon 6425 6518 . - . ID=g4228.t1.exon6;Parent=g4228.t1 NODE_1472_length_11085_cov_41.4799 AUGUSTUS CDS 6425 6518 . - 1 ID=cds.g4228.t1;Parent=g4228.t1 #PROT g4228.t1 g4228 MSESDDRRTALVAAGRGLLTKFRSKKKKAKTASRDSGDKVMNPGTDAVVEGSSTHPSAGILEKPTSKRRVHFVADEGLLSPDDRADTDDDDLDSTGEEVVLRPGAAVVSSPMPSFTSTAKRRHVTNDDGGNVGDARIETPATALVEDLRSAPQQQTHAVAQQTEERELPNTGREEEPTPRGDERSDDRMDRRLEEANALIGRLLADRRQLESDVEKQTVQIEGLVARLENEKRDLLHALDQSRVEAAHLRSSLSRGEHAPAARTVDTATQSPRRSSATSSAPQLSRDSQTDGSYRALEQECSRLSVLLSRESERAKNAESERALVARERDAANAEVVRLSGELHAAIATVGDLERAVDALRASAGIQKHGEKSEENRGEIAELRHVNERLRQRAAMLEQGAQRDAAALDHLSGELRRVRREGAHADGHSGADAHSLSNTRISVGDEAVVATLRARMDQLTRDADAMSTRLSAAADLGDVEVQQLASVFKESAELMRVLRDQEGLPFRDGAGNTASPARPTLSTRSTPTKGGALSHAPDAAVSACAHCTTLVEALAGEKAKLEESVEATKAVGEEVKAWRDKCERMRSSLRRMTEKLAAAEQAEAERAARDARQMVDAARSREQLEASLAIALANNEAAEAERLELLRRCEDLAARAANAEDDARMASDIHRFISQQLVEMAAEVKGSKESLEAQVAEREGLKRELRARSSEVGVLRAERDSLAARATDIERRRIALVRELDAVGRMALDAEERNVALTRLCRDQAARVNSLLEAAHAHESKALGMAAAMEALEARSQREQDEIHALSDACRNCESTIECLARELAGLRPQTVYSSQSVADLMPIAGVSASLSSGRAATTAGFVSPHGGSPVKHTQSTRRSVSFAPRNLLGGGFGSLGDLSRSGKAFGSTGHLNDSGVAQSVGSLGSVRASAPVANNTVRMRSTDSDGIVVEGVPLSVGARVELDGGRMGSVRYIGPVQFAKGTWIGIALDSKGAGKHDGTVGDVRYFDCDPAQGVFVKRPKVARVVDQSVPQRNT* # PASA_UPDATE: g4226.t1, single gene model update, valid-1, status:[pasa:asmbl_1700,status:12],[pasa:asmbl_1701,status:12], valid-1 NODE_1472_length_11085_cov_41.4799 . gene 107 3754 . + . ID=g4226;Name=g4226.t1 NODE_1472_length_11085_cov_41.4799 . mRNA 107 3754 . + . ID=g4226.t1;Parent=g4226;Name=g4226.t1 NODE_1472_length_11085_cov_41.4799 . five_prime_UTR 107 108 . + . ID=g4226.t1.utr5p1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 107 285 . + . ID=g4226.t1.exon1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 109 285 . + 0 ID=cds.g4226.t1;Parent=g4226.t1;5_prime_partial=true NODE_1472_length_11085_cov_41.4799 . exon 652 728 . + . ID=g4226.t1.exon2;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 652 728 . + 0 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 1214 1324 . + . ID=g4226.t1.exon3;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 1214 1324 . + 1 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 1583 1753 . + . ID=g4226.t1.exon4;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 1583 1753 . + 1 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 2009 2157 . + . ID=g4226.t1.exon5;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 2009 2157 . + 1 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 2377 2506 . + . ID=g4226.t1.exon6;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 2377 2506 . + 2 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 2686 2939 . + . ID=g4226.t1.exon7;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 2686 2939 . + 1 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . exon 3232 3754 . + . ID=g4226.t1.exon8;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . CDS 3232 3560 . + 2 ID=cds.g4226.t1;Parent=g4226.t1 NODE_1472_length_11085_cov_41.4799 . three_prime_UTR 3561 3754 . + . ID=g4226.t1.utr3p1;Parent=g4226.t1 #PROT g4226.t1 g4226 TELAIGYRDVFLMLLDDILGVPTIGAQEKRAVTAQDIAIAQPLLFSEHTVGAFLDEIMRAFSVPGVAPINQAYAAEVLTAFVRFRQECSARLSSMPLHIKLVAHIPTICNVILGKGTKGTMSVQFSAYTTPAMSFNRLSLVRLVQTILCACPPLLLDTELNAVPAPFWKLLCTLFFEYKHNNIYHSVFYRCLSLVLHSDHSNTIKALFSKTKLIAHLIEAFESKSTDEGIRGFVVVICNCLRLVGESQEPAGHVRQMLEHHHAWLGFQDRLKSETLTRYLARPVTKGLDMEPLLCFGPPLCAPGNPPPPTPPSPAEVRMIRRQVQEYPSSVDVNSLAHLLRPLRPVTPKAMELGSPMAKLMAICDKSADPSAVAKAPVSPSATRALDNKPHTKTAGGKASGAKGHSAAPAATTTLAVAPPPAPATSAAASPDGEGKKKKNKKKKKKAAGDAKGEAGDAKEEDDDE* # ORIGINAL: g2331.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 12722 13093 . - . ID=g2331;Name=g2331.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 12722 13093 . - . ID=g2331.t1;Parent=g2331;Name=g2331.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 12985 13093 . - . ID=g2331.t1.exon1;Parent=g2331.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 12985 13093 . - 0 ID=cds.g2331.t1;Parent=g2331.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 12722 12906 . - . ID=g2331.t1.exon2;Parent=g2331.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 12722 12906 . - 2 ID=cds.g2331.t1;Parent=g2331.t1 #PROT g2331.t1 g2331 MSDAMEVIASAGGLIAMTTSSLHQLQTAVNNELSDRANVPVLEFSQSKDTKTGAAKTLSFVGGVTCTATHDQAKDLVKGKKYRARIANDYLVSINPE* # ORIGINAL: g2330.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 10208 10834 . + . ID=g2330;Name=g2330.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 10208 10834 . + . ID=g2330.t1;Parent=g2330;Name=g2330.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 10208 10834 . + . ID=g2330.t1.exon1;Parent=g2330.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 10208 10834 . + 0 ID=cds.g2330.t1;Parent=g2330.t1 #PROT g2330.t1 g2330 MFADVYSLNISCTEVTDVSALGGVHLLNLSYTEVTDVSALGGVHTLNLFCCTGVTDVSALGGVHSLNLSGTEVTDVSALGGVHSLDLSHCRVTDMSALGNVYSLDLSCTGVTDVSALGGVHLLNLSYCRGVTNVSALGGVHSLNLSNCKNLMDVSALGGVHSLDLFGCYKVTDMSALGGVHSLNPCTGVTDALHWAASIRSIQNQLWE* # ORIGINAL: g2332.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 15722 16153 . + . ID=g2332;Name=g2332.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 15722 16153 . + . ID=g2332.t1;Parent=g2332;Name=g2332.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 15722 16153 . + . ID=g2332.t1.exon1;Parent=g2332.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 15722 16153 . + 0 ID=cds.g2332.t1;Parent=g2332.t1 #PROT g2332.t1 g2332 MKEQGPLCGRVLEVQQLRVRRSLAGINVGNKAKRVLGEGPTRRFVGFSNLRINIIPKHGNVDVRDRADKVEKRVECILCMISHKNDRLNFASFQYLFEFFHVGKGLIGELCLNVLVTRAKSDSHTPFREIVHSGHRNEQRNLA* # ORIGINAL: g2335.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 25185 26196 . + . ID=g2335;Name=g2335.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 25185 26196 . + . ID=g2335.t1;Parent=g2335;Name=g2335.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 25185 25191 . + . ID=g2335.t1.exon1;Parent=g2335.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 25185 25191 . + 0 ID=cds.g2335.t1;Parent=g2335.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 25322 26196 . + . ID=g2335.t1.exon2;Parent=g2335.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 25322 26196 . + 2 ID=cds.g2335.t1;Parent=g2335.t1 #PROT g2335.t1 g2335 MIESVEQIAVLTAAEHARATLESTEPEVEKDAFERVARETAKAIADERVARAEKALAGERVARETTAKALETTAKALETTAKALETTAKALKTTAKALETTAKALETTEKALTAERGARKNVEDKACDNARKLAKAEKALANIHKAVLLLVHPFMNGIEERMTELNEQVDNYEKAYGNILGLEIVPVETSSTGTIKQCHALPPGSIKAVVVCGQLSLLSSDTTPEWIKLFKVFEAGTCPPIIFGLRSDEQQILDFDFLETIRGTMTRNYVFYDPHYYSDDLLANALEVSAKEP* # ORIGINAL: g2333.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 16173 16718 . + . ID=g2333;Name=g2333.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 16173 16718 . + . ID=g2333.t1;Parent=g2333;Name=g2333.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 16173 16718 . + . ID=g2333.t1.exon1;Parent=g2333.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 16173 16718 . + 0 ID=cds.g2333.t1;Parent=g2333.t1 #PROT g2333.t1 g2333 MFLSASIRSRTSRASAAIIRASAATSALRSSSARLGSDYTRFQGVTCLTVVFCTRLRSDECLTVVFCTRLGSDYMRFQGVTCLTVVFCTRFRRDYTRFQGVTCLTVVFCTRFRASKASRFLHSSSACSSEAIAHASAEIEHFALSSAFGSSDSSVSCSAHATSAFAIVLFSSIVFEVLVIP* # ORIGINAL: g2329.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 1 1181 . - . ID=g2329;Name=g2329.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 1 1181 . - . ID=g2329.t1;Parent=g2329;Name=g2329.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 1 1181 . - . ID=g2329.t1.exon1;Parent=g2329.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 1 1181 . - 0 ID=cds.g2329.t1;Parent=g2329.t1 #PROT g2329.t1 g2329 MRSTIVHTLFSLDTPFVSTWGTSHVELGNLTFIDVLADSGFIIYTYEKSTMTISNVSISDSVLTSGGVIKSYDDSVVAISDLVLSNVTTTLGTIIANTRASISINTLDIAHINGEGNLLAVENDATMTVLNARINDIALSQAVVSLMNRGRITLNDVNITNVASSWAGLAEVRDDSHLSVTDVRLAHVHAFRAGVFYLLGRARVDMLRCDVSDVRVDEDGGFAFLFSTARLSVVDSRLSDFVSRGSTVFLINQGNASFDSCSVSNIRTETEGGFASIRNSAVLSLVRSSVRDVSSGVGGTFFLSNSGRLDVTDTVIADSRATNKGGGGVVYVSDSAHVSLLDCNVTNANASVGGFLRSSGGFVNLTDVNVVHSNSEGSGGCIYAADSTSLSIR # ORIGINAL: g2336.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 27332 27934 . + . ID=g2336;Name=g2336.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 27332 27934 . + . ID=g2336.t1;Parent=g2336;Name=g2336.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 27332 27934 . + . ID=g2336.t1.exon1;Parent=g2336.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 27332 27934 . + 0 ID=cds.g2336.t1;Parent=g2336.t1 #PROT g2336.t1 g2336 MESVLENARLAEALKKANEEIARLKTTEADALKKADEEIAKRKTTEEVLKKADEEIAKLTTEADALKKADEEIAKLKKAAEALKKADEEITKLKKAEAEALKKADEEIAKRKTTEEVLKKVNKEIAKCKMAEADAVKKAEVEIAKRKTTEEALKEVKNESAEARQIVAMTSLQRFVDFVNICIERLFMKQYQRCSPWFHF* # ORIGINAL: g2334.t1 original gene structure, not modified by PASA NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS gene 17601 19715 . + . ID=g2334;Name=g2334.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS mRNA 17601 19715 . + . ID=g2334.t1;Parent=g2334;Name=g2334.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS exon 17601 19715 . + . ID=g2334.t1.exon1;Parent=g2334.t1 NODE_249_length_29266_cov_22.5931_potentialcontaminant AUGUSTUS CDS 17601 19715 . + 0 ID=cds.g2334.t1;Parent=g2334.t1 #PROT g2334.t1 g2334 MDEVKETDVAATFGTIDATSTEYIVAEEIRSTDDMTKQPDKTTVHATMDTWASVQQVDITMRSIIETAAQTANIASDATVNMSTQHETTQAIGEPSDENQVSGELKCSSPDAVIVEVPPGSHRVTLYEPNWTTLTADASKRMALLRAIATARISQLQELTVRQCVDATKMDDAVPSHPLIVKLGAYYNVHRSTERVTLTPILLATVPTSAIRHAEPAAIAKAIASCLEWEDITDIHLAADDVFYPPPPVPEVAARIPPNDNTWPEDASNISGADHETAMQHILECIADYVAECHPNVRAMQPSGTRRRGGSLVHENVLVCYVNHKGYVPWNGRLLPVAANFDGRMYRLDVRGGAEFKRLTHANHTVVRTANPSDPMRVGTEIGRPDINGVGTAGPGVRFVPTTTDGQLGVANLVSSATRYELTHADDNYYVLTCAHILEGKRGLFGSIVENSIVHLYSNGADAVGTCMELCDGDVTVPTGHGTRKFSIDAAIVRVRTNRWPTSNQDAFEAVDSRMPPTSLRDRWYPRRVLLDLLNGHLPALTSSVPMDEILNPTAADKDRIYFKLGATTNLTAMQRQPMTLLDPNDNEEYILVESDEPALFKPPKPPRKFYTTMTLADYVENDKVVPTRSSDEGDSGSAIFDADGRVLGMLIGGGPVGLQWRTFATPMCVLEQVLGVTTCSTVHSLVPGANPNDSFSANKCIVQ* # ORIGINAL: g6978.t1 original gene structure, not modified by PASA NODE_1783_length_9273_cov_40.7253 AUGUSTUS gene 2512 2828 . - . ID=g6978;Name=g6978.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS mRNA 2512 2828 . - . ID=g6978.t1;Parent=g6978;Name=g6978.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 2622 2828 . - . ID=g6978.t1.exon1;Parent=g6978.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 2622 2828 . - 0 ID=cds.g6978.t1;Parent=g6978.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 2512 2523 . - . ID=g6978.t1.exon2;Parent=g6978.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 2512 2523 . - 0 ID=cds.g6978.t1;Parent=g6978.t1 #PROT g6978.t1 g6978 MEKERANLKVELAKAAVKAKRATKALEEERAKERKRSHEGTDSDSDGNAGGHARRKPPPPNVSAFKMVMLHS* # PASA_UPDATE: g6977.t1, single gene model update, valid-1, status:[pasa:asmbl_2607,status:12], valid-1 NODE_1783_length_9273_cov_40.7253 . gene 181 2427 . + . ID=g6977;Name=g6977.t1 NODE_1783_length_9273_cov_40.7253 . mRNA 181 2427 . + . ID=g6977.t1;Parent=g6977;Name=g6977.t1 NODE_1783_length_9273_cov_40.7253 . five_prime_UTR 181 259 . + . ID=g6977.t1.utr5p1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . exon 181 371 . + . ID=g6977.t1.exon1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . CDS 260 371 . + 0 ID=cds.g6977.t1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . exon 924 1145 . + . ID=g6977.t1.exon2;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . CDS 924 1145 . + 2 ID=cds.g6977.t1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . exon 1588 1827 . + . ID=g6977.t1.exon3;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . CDS 1588 1827 . + 2 ID=cds.g6977.t1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . exon 2085 2427 . + . ID=g6977.t1.exon4;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . CDS 2085 2284 . + 2 ID=cds.g6977.t1;Parent=g6977.t1 NODE_1783_length_9273_cov_40.7253 . three_prime_UTR 2285 2427 . + . ID=g6977.t1.utr3p1;Parent=g6977.t1 #PROT g6977.t1 g6977 MYMLTKESPIGFFHNNVSDISHYFHLGGAVRYTTVSPDGVVEQFVLGGDIANGQLLQLVVRGGYWKSSELIEGDYTLVSECCVPSFKFRNRTLITEHMADSKFPTLKTQRPDLLPRCLHPHPGKFVFHMTPKEYYASTTAGGRPYVASGFEAEKFTHCCSTVEESVEVANAFLKGIAGPMLLLVLDEYKLKGLVFEEPATPPGFSLPAALRHVTVFPHVYAPIDGDAVAEVHDMPRTADGSYLELALPDTSVVHRET* # ORIGINAL: g6979.t1 original gene structure, not modified by PASA NODE_1783_length_9273_cov_40.7253 AUGUSTUS gene 3547 8559 . - . ID=g6979;Name=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS mRNA 3547 8559 . - . ID=g6979.t1;Parent=g6979;Name=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 8100 8559 . - . ID=g6979.t1.exon1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 8100 8559 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 7353 7868 . - . ID=g6979.t1.exon2;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 7353 7868 . - 2 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 6874 7043 . - . ID=g6979.t1.exon3;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 6874 7043 . - 2 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 6471 6589 . - . ID=g6979.t1.exon4;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 6471 6589 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 5776 6022 . - . ID=g6979.t1.exon5;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 5776 6022 . - 1 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 5492 5578 . - . ID=g6979.t1.exon6;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 5492 5578 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 5194 5298 . - . ID=g6979.t1.exon7;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 5194 5298 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 4851 4921 . - . ID=g6979.t1.exon8;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 4851 4921 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 4619 4673 . - . ID=g6979.t1.exon9;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 4619 4673 . - 1 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 4151 4286 . - . ID=g6979.t1.exon10;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 4151 4286 . - 0 ID=cds.g6979.t1;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS exon 3547 4001 . - . ID=g6979.t1.exon11;Parent=g6979.t1 NODE_1783_length_9273_cov_40.7253 AUGUSTUS CDS 3547 4001 . - 2 ID=cds.g6979.t1;Parent=g6979.t1 #PROT g6979.t1 g6979 MGLATARRDVDPPAAFSSAGDGQFGVYVVTFTVPSNSASQNATAIAIVDDLGRLVQFIAYSTQPNVTIAAAVDGPAAGYTATFIGSFNLTANMSLQMGGVGSAAELLSWLPPSIPSIGAPNPSQTLSFVCEEKVFTDGSNEIYPLTVVGGVSYGYCASGSVSNVSPYRQCTLPAGAYVGVFGNLLSDANSACVTRTCQAGYAIINRTACVACEPNTYSPDSNAQRCLACPRNSNSPKNSSQIDECVCASGFSRSATASSFVCVRVCANNTYNPSGTDDCIACPSGSVTKNETAVSIADCVCTSGTMRIDGRTNAYYCAAVSSGGIAKGTLAGIIVGCVGAFILVAVLTGVWWLRRKRSVIEQEAKNWVIDISQVKVLNLIGQGSFGKVYIAFWRDTKVAMKVLSISTIVESENGESRFVVVGNNTVTFGSKLSRMLRRMSSRISISRKESKTSLTGFSPASQAFGTDSIRSDHKDSTSAPNSFRSVQASIGAASVRSRKESREKDPFAKATREFMMEIETMVKLRHPNIVLFMGAAIRQPQLCLITEFCEHGTLLHVLERPNTVVNWEFRINALLDAARGMSYLHSATPPILHLDFKSLNCLVDERFRVKVSDFGLARLKDAGSNVGMTGTVLWMAPEIMRGDDQFDEKADVYSYGIVMNEVIVRTRPYKDIGIDQSALMIEIAYDGMRPSFPPGTPSAYLDMVERCVADNTTVRPAFRDIVQWLSTVEWQSWAPLDIAAPTQKTVDDFNVKSTSASNGDSLMNTVDANVKGSAMPPAPAESVNRLPGAVENDVTEDDGYTVDVDA* # PASA_UPDATE: g1387.t1, single gene model update, valid-1, status:[pasa:asmbl_1746,status:12], valid-1 NODE_1489_length_10984_cov_41.2753 . gene 3591 7892 . + . ID=g1387;Name=g1387.t1 NODE_1489_length_10984_cov_41.2753 . mRNA 3591 7892 . + . ID=g1387.t1;Parent=g1387;Name=g1387.t1 NODE_1489_length_10984_cov_41.2753 . five_prime_UTR 3591 3654 . + . ID=g1387.t1.utr5p1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 3591 3813 . + . ID=g1387.t1.exon1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 3655 3813 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 4034 4129 . + . ID=g1387.t1.exon2;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 4034 4129 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 4499 4618 . + . ID=g1387.t1.exon3;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 4499 4618 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 4835 5056 . + . ID=g1387.t1.exon4;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 4835 5056 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 5246 5353 . + . ID=g1387.t1.exon5;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 5246 5353 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 5495 5593 . + . ID=g1387.t1.exon6;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 5495 5593 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 5747 5840 . + . ID=g1387.t1.exon7;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 5747 5840 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 6041 6168 . + . ID=g1387.t1.exon8;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 6041 6168 . + 2 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 6487 6567 . + . ID=g1387.t1.exon9;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 6487 6567 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 6827 6967 . + . ID=g1387.t1.exon10;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 6827 6967 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 7297 7407 . + . ID=g1387.t1.exon11;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 7297 7407 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . exon 7646 7892 . + . ID=g1387.t1.exon12;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . CDS 7646 7858 . + 0 ID=cds.g1387.t1;Parent=g1387.t1 NODE_1489_length_10984_cov_41.2753 . three_prime_UTR 7859 7892 . + . ID=g1387.t1.utr3p1;Parent=g1387.t1 #PROT g1387.t1 g1387 MADVAESSGSAAGAAMPTMSEEVRLQAEDLKAQIERQGAVVRDLKANKAPKEKIDEQVALLKELKEELSDLTSGKPRKFVLKVPKGMRDYNPMQMAVREKVFTKIKECFRRHGAEQIETPVMELRETLLGKYGEDTKLIYDLKDQGGEMLSLRYDLTVPFARYVAMNKVRQMKRFHIARVYRRDQPRMDNGRYREFYQCDIDFAGEYEAMLPDAECVRVISEILDDLELNEYTIKVNHRMLLDGIFAVCGVPADKFRSICSAVDKLDKVDWVDVRKEMVDEKGLDPAAADLIGEYVQLKGKTDLVERLLKDERLMTNPMAKEGVQAMGTLFEYLELLNVTHRASFDLSLARGLDYYTGVIYEAVLSGANVGSIAGGGRYDNLVGMFAGDKGQKVPCVGVSIGIERIFSILERRAENDKNARSIETDVLVISAQKNMLKERLRILSELWDAKIKAETVYKANPKALTQFQYCEENKVPLAIIVGEGELQAGTVTIRDVAGKADVAVPRGEMVAEIRRRLALLKQ* # ORIGINAL: g1386.t1 original gene structure, not modified by PASA NODE_1489_length_10984_cov_41.2753 AUGUSTUS gene 969 3210 . - . ID=g1386;Name=g1386.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS mRNA 969 3210 . - . ID=g1386.t1;Parent=g1386;Name=g1386.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS exon 3040 3210 . - . ID=g1386.t1.exon1;Parent=g1386.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS CDS 3040 3210 . - 0 ID=cds.g1386.t1;Parent=g1386.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS exon 969 2936 . - . ID=g1386.t1.exon2;Parent=g1386.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS CDS 969 2936 . - 0 ID=cds.g1386.t1;Parent=g1386.t1 #PROT g1386.t1 g1386 MSLRGSFRVLGPVIGTVLRRGYLTPSAPVRSGLRTYTSQMASASETLAAYEKRVTLAEKSVVDLKKKIEEVSAAIGKPKGGSDSIEKLKLENAKLKYQMLHLKRNLDAELARGSASAPTKRPALEKYRYVPDDKHLPNMMEVVTGYFRNAIEAAYPGVDAPVSMTVSAQFADYQCNSAMPIAKLMKGKPDAPANPREAAQRIIDHLERTDIIGKVEIAGPGFINVHLTPSFAKKIVTDIVRKGVRPPNVPKKRVVVDFSSPNIAKEMHVGHLRSTIIGDCLCRLLEFYEFDVLRVNHVGDWGTQFGMLIAHLKDMFPDYETVSPPIGDLQAFYKASKKRFDEDADFKRRAYDHVVRLQSGDASVTRGWKLICDVSRNEFQRIYDRLQVRIEERGESFYQPLMAPAVVDCESKGLVVVEEGRKVLFVEGQIVPLTLVKSDGGYTYDTSDLAALRYRVNELKADWVVYVVDQGQALHFELIFAAAAKAGYFDPRVSRIEHVGFGVVLGEDHKKFKTRSGDTVRLVDLLDESLDRALAVLKEKGRDKELSAEELHRAQTAVAYGAVKYADLSCGRQNDYVFSFDRMLSLKGNTAAYLLYAFTRIRSIARKAGIDVQTNAEFLATEADPQNDHEIKLAKHLLRFSEVTSKVLDTFMPHVLCDYLYNLSDIFTEFYDHCRVLDGDKVHMPRLVLCEATAMVMGKGFEILGLTPVDRM* # ORIGINAL: g1385.t1 original gene structure, not modified by PASA NODE_1489_length_10984_cov_41.2753 AUGUSTUS gene 240 395 . + . ID=g1385;Name=g1385.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS mRNA 240 395 . + . ID=g1385.t1;Parent=g1385;Name=g1385.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS exon 240 395 . + . ID=g1385.t1.exon1;Parent=g1385.t1 NODE_1489_length_10984_cov_41.2753 AUGUSTUS CDS 240 395 . + 0 ID=cds.g1385.t1;Parent=g1385.t1 #PROT g1385.t1 g1385 HVVFAVKFVLAYAIPDIPSNVQLAMRREKHQVYQILYGKQRVKTASKPTED* # PASA_UPDATE: g1388.t1, single gene model update, valid-1, status:[pasa:asmbl_1747,status:12], valid-1 NODE_1489_length_10984_cov_41.2753 . gene 8546 9556 . - . ID=g1388;Name=g1388.t1 NODE_1489_length_10984_cov_41.2753 . mRNA 8546 9556 . - . ID=g1388.t1;Parent=g1388;Name=g1388.t1 NODE_1489_length_10984_cov_41.2753 . five_prime_UTR 9553 9556 . - . ID=g1388.t1.utr5p1;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . exon 9087 9556 . - . ID=g1388.t1.exon1;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . CDS 9087 9552 . - 0 ID=cds.g1388.t1;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . exon 8837 8935 . - . ID=g1388.t1.exon2;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . CDS 8837 8935 . - 2 ID=cds.g1388.t1;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . exon 8546 8731 . - . ID=g1388.t1.exon3;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . CDS 8619 8731 . - 2 ID=cds.g1388.t1;Parent=g1388.t1 NODE_1489_length_10984_cov_41.2753 . three_prime_UTR 8546 8618 . - . ID=g1388.t1.utr3p1;Parent=g1388.t1 #PROT g1388.t1 g1388 MVTSSPPALGLGMEPASPDILIIPPRARNVGLFTKEVILDFLMYGGVMGILTLASFAVVVYGVGNGIEGADCNNKYSSECDNVFRGRTVTFVQLSLMLLILAYACRHERKSMLRMRWRDNKVLAWTLLFGVVTTIPTPYIPYLNKSILHQAPITWEWGLIAGNLLFFVVAIELYKLAKRRIWGYAKELDKVATADEFGKAALSRATNEALSLSTAGPKANRAVLQ* # PASA_UPDATE: g10268.t1, single gene model update, valid-1, status:[pasa:asmbl_7434,status:12], valid-1 NODE_4554_length_1469_cov_30.3766 . gene 144 800 . + . ID=g10268;Name=g10268.t1 NODE_4554_length_1469_cov_30.3766 . mRNA 144 800 . + . ID=g10268.t1;Parent=g10268;Name=g10268.t1 NODE_4554_length_1469_cov_30.3766 . five_prime_UTR 144 144 . + . ID=g10268.t1.utr5p1;Parent=g10268.t1 NODE_4554_length_1469_cov_30.3766 . exon 144 393 . + . ID=g10268.t1.exon1;Parent=g10268.t1 NODE_4554_length_1469_cov_30.3766 . CDS 145 393 . + 0 ID=cds.g10268.t1;Parent=g10268.t1;5_prime_partial=true NODE_4554_length_1469_cov_30.3766 . exon 619 800 . + . ID=g10268.t1.exon2;Parent=g10268.t1 NODE_4554_length_1469_cov_30.3766 . CDS 619 726 . + 0 ID=cds.g10268.t1;Parent=g10268.t1 NODE_4554_length_1469_cov_30.3766 . three_prime_UTR 727 800 . + . ID=g10268.t1.utr3p1;Parent=g10268.t1 #PROT g10268.t1 g10268 NNFSFKCHRKSNGTEIYAVNNVSFHPTYHTLATAGADGTFCFWDKKDKQRLKNFERKQVPISAAAFNADATIYAYAQSYDWSKGHEFYNPAIMKSQIFLHAVDDAEIRPKPQQQATRR* # ORIGINAL: g1558.t1 original gene structure, not modified by PASA NODE_2485_length_6099_cov_43.0287 AUGUSTUS gene 1392 3309 . - . ID=g1558;Name=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS mRNA 1392 3309 . - . ID=g1558.t1;Parent=g1558;Name=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS exon 3246 3309 . - . ID=g1558.t1.exon1;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS CDS 3246 3309 . - 0 ID=cds.g1558.t1;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS exon 2933 3104 . - . ID=g1558.t1.exon2;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS CDS 2933 3104 . - 2 ID=cds.g1558.t1;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS exon 2508 2862 . - . ID=g1558.t1.exon3;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS CDS 2508 2862 . - 1 ID=cds.g1558.t1;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS exon 1392 2273 . - . ID=g1558.t1.exon4;Parent=g1558.t1 NODE_2485_length_6099_cov_43.0287 AUGUSTUS CDS 1392 2273 . - 0 ID=cds.g1558.t1;Parent=g1558.t1 #PROT g1558.t1 g1558 MAPAPVTMARLVTAAVLCFCAAAFTSSAPITLGSLDAPGLMACDSILIAAKDNDPVLASRWSGYDIRTGAIASQIPYQSKRQQLETDISAGGSAFGVSVQSDFKYSNEEHSTDRHVSFQITVDKFTKSDRIQTPPPLTADAMRILESNAGTFMSIYGTHFVIAKNRGCSFTMSGAYAFSDSSKAVEFLTSLKTSYSGAEYVRAFDPATAGTSSLLALAIRRQVTLLQRLRDARSFLSANGGPAASAPGYMTTICDTPVTGPTPLAYSQLAAAITNVSAIQYYTAKGLVESHVDDVQLAFFRYNPLLLSVTSEWKVTINAYSGATLSIPTNTVETAINTASPSFKQLDFGMVVNDGRDDTGYKTRFFQCGYGTPMEQCVHANFLGIGLTACQNGSACHGLNLAVIGSERNNYNENGLYYKRNPLMDRWQVLPTDGQTYLYQLKNRNTDANIVDWNFNIWRGAKAVRRVQSLPLTRKSLFRTCTTDWRRRTF* # PASA_UPDATE: g1557.t1, single gene model update, valid-1, status:[pasa:asmbl_4413,status:12], valid-1 NODE_2485_length_6099_cov_43.0287 . gene 1 600 . - . ID=g1557;Name=g1557.t1 NODE_2485_length_6099_cov_43.0287 . mRNA 1 600 . - . ID=g1557.t1;Parent=g1557;Name=g1557.t1 NODE_2485_length_6099_cov_43.0287 . exon 1 600 . - . ID=g1557.t1.exon1;Parent=g1557.t1 NODE_2485_length_6099_cov_43.0287 . CDS 1 600 . - 0 ID=cds.g1557.t1;Parent=g1557.t1;3_prime_partial=true #PROT g1557.t1 g1557 MAEEYELVAEDDDTYLITDHDEARAVVSHVDMGDPMMHGDDPGATRSSGRRLSVKATEMLAQLQCSPSSLKSVNAILTRTFALACMLFVLGTCLGIVIGFAAGSHHDAPPCSPCASVGSCNGSTEGDAAQQLPATTVRYTAATPDVTTGTGTPAPCDCGPGNVVTVTQYIPSVQVVTNAASLVHTTTLTVTVTPSPTCEV # PASA_UPDATE: g1559.t1, single gene model update, valid-1, status:[pasa:asmbl_4414,status:12], valid-1 NODE_2485_length_6099_cov_43.0287 . gene 4952 6099 . - . ID=g1559;Name=g1559.t1 NODE_2485_length_6099_cov_43.0287 . mRNA 4952 6099 . - . ID=g1559.t1;Parent=g1559;Name=g1559.t1 NODE_2485_length_6099_cov_43.0287 . five_prime_UTR 6099 6099 . - . ID=g1559.t1.utr5p1;Parent=g1559.t1 NODE_2485_length_6099_cov_43.0287 . exon 5786 6099 . - . ID=g1559.t1.exon1;Parent=g1559.t1 NODE_2485_length_6099_cov_43.0287 . CDS 5786 6098 . - 0 ID=cds.g1559.t1;Parent=g1559.t1;5_prime_partial=true NODE_2485_length_6099_cov_43.0287 . exon 4952 5552 . - . ID=g1559.t1.exon2;Parent=g1559.t1 NODE_2485_length_6099_cov_43.0287 . CDS 4972 5552 . - 2 ID=cds.g1559.t1;Parent=g1559.t1 NODE_2485_length_6099_cov_43.0287 . three_prime_UTR 4952 4971 . - . ID=g1559.t1.utr3p1;Parent=g1559.t1 #PROT g1559.t1 g1559 RNIDIAVEGTLSLSAKAAPILRDVLFDAARSVRTVGKDAKGSTVHLSAYQAWLSAFPDADADYEPNVPILGSGSDFIGFYQHLGIPSMDMKHVRSPKIYPLYHSMHDGFAWLDKLDPGFAAHTTVVRVWGATALRLLDARALPLNAITMAKSLLKQTDALAATLSHGNEEDDAYTDAIHVLRMAVVGLKNAANAFHQRLAVVAADENASATELRRMNDRLAWVERALVAPEGLPGRPWYRHLVNAPSALNSYSGSGFPGAVDAHARGDADQTRRALARVTAAIVAAARSLDIPDPVA* # PASA_UPDATE: g10878.t1, single gene model update, valid-1, status:[pasa:asmbl_3294,status:12], valid-1 NODE_2022_length_8062_cov_37.8242 . gene 289 3039 . - . ID=g10878;Name=g10878.t1 NODE_2022_length_8062_cov_37.8242 . mRNA 289 3039 . - . ID=g10878.t1;Parent=g10878;Name=g10878.t1 NODE_2022_length_8062_cov_37.8242 . five_prime_UTR 3000 3039 . - . ID=g10878.t1.utr5p1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . five_prime_UTR 2809 2828 . - . ID=g10878.t1.utr5p2;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 3000 3039 . - . ID=g10878.t1.exon1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 2707 2828 . - . ID=g10878.t1.exon2;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 2707 2808 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 2435 2557 . - . ID=g10878.t1.exon3;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 2435 2557 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 2149 2155 . - . ID=g10878.t1.exon4;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 2149 2155 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 1896 1990 . - . ID=g10878.t1.exon5;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 1896 1990 . - 2 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 1545 1652 . - . ID=g10878.t1.exon6;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 1545 1652 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 1375 1432 . - . ID=g10878.t1.exon7;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 1375 1432 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 973 1064 . - . ID=g10878.t1.exon8;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 973 1064 . - 2 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 624 737 . - . ID=g10878.t1.exon9;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 624 737 . - 0 ID=cds.g10878.t1;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . exon 289 355 . - . ID=g10878.t1.exon10;Parent=g10878.t1 NODE_2022_length_8062_cov_37.8242 . CDS 289 355 . - 0 ID=cds.g10878.t1;Parent=g10878.t1;3_prime_partial=true #PROT g10878.t1 g10878 MKAIAVVFVAVVGLLVAADARREEFRDMKLTRREVIKTPRPQDYLNAASLPTNFDWRNVNGTNFLTRNLNQHIPVYCGSCWAHGSMSSLGDRIKIARNAAWPDIIPAIQVILNCATDVAGSCYGGDPLATYSFVHDNGVPDETCQQYKATDEDCTAQNTCENCKGPPGQGTCWAQQNYTKYYVDEYGSVDGEANMMAEIYARGPISCGVDADPLEDYTGGILDDTTGATSINHIIAVVGWGEEDGVKYWIVRNSC # ORIGINAL: g10880.t1 original gene structure, not modified by PASA NODE_2022_length_8062_cov_37.8242 AUGUSTUS gene 7054 7908 . - . ID=g10880;Name=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS mRNA 7054 7908 . - . ID=g10880.t1;Parent=g10880;Name=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS exon 7812 7908 . - . ID=g10880.t1.exon1;Parent=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS CDS 7812 7908 . - 0 ID=cds.g10880.t1;Parent=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS exon 7414 7558 . - . ID=g10880.t1.exon2;Parent=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS CDS 7414 7558 . - 2 ID=cds.g10880.t1;Parent=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS exon 7054 7120 . - . ID=g10880.t1.exon3;Parent=g10880.t1 NODE_2022_length_8062_cov_37.8242 AUGUSTUS CDS 7054 7120 . - 1 ID=cds.g10880.t1;Parent=g10880.t1 #PROT g10880.t1 g10880 MTSWCVVCDVWYMEPQNKLIDETPIQFANRTKDLIAQQAGLISVPWDGYLKYFQPNIREKESRQRIFAQALLMRFPNLGDSDISKGNKGDIRQRKQGSKRDD* # PASA_UPDATE: g10879.t1, single gene model update, valid-1, status:[pasa:asmbl_3296,status:12], valid-1 NODE_2022_length_8062_cov_37.8242 . gene 3569 6600 . + . ID=g10879;Name=g10879.t1 NODE_2022_length_8062_cov_37.8242 . mRNA 3569 6600 . + . ID=g10879.t1;Parent=g10879;Name=g10879.t1 NODE_2022_length_8062_cov_37.8242 . five_prime_UTR 3569 3629 . + . ID=g10879.t1.utr5p1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 3569 3731 . + . ID=g10879.t1.exon1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 3630 3731 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 3888 3982 . + . ID=g10879.t1.exon2;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 3888 3982 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 4223 4327 . + . ID=g10879.t1.exon3;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 4223 4327 . + 1 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 4699 4864 . + . ID=g10879.t1.exon4;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 4699 4864 . + 1 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 4983 5261 . + . ID=g10879.t1.exon5;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 4983 5261 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 5607 5720 . + . ID=g10879.t1.exon6;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 5607 5720 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 6050 6178 . + . ID=g10879.t1.exon7;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 6050 6178 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . exon 6424 6600 . + . ID=g10879.t1.exon8;Parent=g10879.t1 NODE_2022_length_8062_cov_37.8242 . CDS 6424 6600 . + 0 ID=cds.g10879.t1;Parent=g10879.t1 #PROT g10879.t1 g10879 MAMTPKAIANRIKAKGLQKLRWYCEMCQKQCRDENGFKCHCMSESHQRMLLIVAEKPEDFVDQFSQEFEEAFLLNLKRRCGTKRIAANIVYNDYISDRTHRHMNSTRWETLTEFVKHLGRTGQCIVDETPKGWFIAYIDRDPVLLARQEALEKREKAELDEEERAQRHIEKQIRLAAERTTQDKSDAEVKELVKDEDTKITIAMAANASGDSDRTTVGKEAVKLTLGANPLTALASRAVEESKAKGKGDDDSRKRKSALDRIMEDDMRRKEKVVHRDYWLAEGIVVKVLNKKLGDGRYYKAKGVVDKVIDRYVAEISMIESGDRLKLDQEHLETVLPAIGGSVLLVNGPHRGSKGRLESINVDAFSASVKLADRTVNDVPYEDICKLA* # PASA_UPDATE: g12627.t1, single gene model update, valid-1, status:[pasa:asmbl_6405,status:12], valid-1 NODE_3685_length_2962_cov_100.257 . gene 351 2861 . - . ID=g12627;Name=g12627.t1 NODE_3685_length_2962_cov_100.257 . mRNA 351 2861 . - . ID=g12627.t1;Parent=g12627;Name=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 2625 2861 . - . ID=g12627.t1.exon1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 2625 2861 . - 0 ID=cds.g12627.t1;Parent=g12627.t1;5_prime_partial=true NODE_3685_length_2962_cov_100.257 . exon 2307 2411 . - . ID=g12627.t1.exon2;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 2307 2411 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 2075 2182 . - . ID=g12627.t1.exon3;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 2075 2182 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 1607 1945 . - . ID=g12627.t1.exon4;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 1607 1945 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 1314 1427 . - . ID=g12627.t1.exon5;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 1314 1427 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 1081 1156 . - . ID=g12627.t1.exon6;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 1081 1156 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 829 977 . - . ID=g12627.t1.exon7;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 829 977 . - 2 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . exon 351 617 . - . ID=g12627.t1.exon8;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . CDS 555 617 . - 0 ID=cds.g12627.t1;Parent=g12627.t1 NODE_3685_length_2962_cov_100.257 . three_prime_UTR 351 554 . - . ID=g12627.t1.utr3p1;Parent=g12627.t1 #PROT g12627.t1 g12627 SFCVAAVSESGAVHVFRQSTAKKQLSRQTSSKPAAAGTVVTFVSESDGAAIPALTVTFGGLSSLVVARGSAIRPNFERVEYKEESSGELKGNVIVKRAVSSGLLLHGSDAKSKKQLTGRVEDVTLIAADNGVIHNSASFKKQKTDGNKPEPSLGEKLVSLGLDDSTGAPAKRAKLPKGPPKAHSLAQMLVQGLHSGDMQLIEECLANTNESIVKNTVRRLPNAYVVRFLTQIVNRFQAKPSRGLTLVVWIRAVLVIHAAYLMSSPDLVRSLGGLYQLVDARLAVFKKLLKLSGRLDLILSQISARQAGMTVDNLEELKQAAVVYEEDSDDASENADEDKDSDEEDEDHNDMNVDEEIVDDGVDEGMGLHGDDSDSYDEHDDDDDSNDDASDDDDDV* # ORIGINAL: g479.t1 original gene structure, not modified by PASA NODE_526_length_21814_cov_30.5601 AUGUSTUS gene 18969 21814 . - . ID=g479;Name=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS mRNA 18969 21814 . - . ID=g479.t1;Parent=g479;Name=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 21585 21814 . - . ID=g479.t1.exon1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 21585 21814 . - 1 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 21090 21499 . - . ID=g479.t1.exon2;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 21090 21499 . - 2 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 20311 20995 . - . ID=g479.t1.exon3;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 20311 20995 . - 0 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 19957 20171 . - . ID=g479.t1.exon4;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 19957 20171 . - 2 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 19721 19835 . - . ID=g479.t1.exon5;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 19721 19835 . - 0 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 19579 19627 . - . ID=g479.t1.exon6;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 19579 19627 . - 2 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 19291 19476 . - . ID=g479.t1.exon7;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 19291 19476 . - 1 ID=cds.g479.t1;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 18969 19143 . - . ID=g479.t1.exon8;Parent=g479.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 18969 19143 . - 1 ID=cds.g479.t1;Parent=g479.t1 #PROT g479.t1 g479 CTQPCTCLNGAACDRFTGACTCNAGWTGPTCDAECPRGQYGPNCALTCACGDGTCNRFDGTCTCTPGSGFYGSSCSSCACNHGVCDDGFLGTGTCDCNSLLGVGGPNCNTSCDRLPGAQTYCYGCQTPCACENGAECHASTGECTCAFGWTGVVCNVITPPSVPKVNATAEVSDYRVGIRLRWSHDDIGPRAWSSPGWRYEISRAGCFPKVYQVGDVLTFLDLDVVVNQGYTYFVKAYNSRNVSSTKAGQFAIESLEKAEPPSPPYNVSSTPTLNPDNQKSMIKFTWKEDISSGPIIKTLIFRDGRLVLQGYTVTEYKDRDVVFGKTYIYEIISVNQYGNSTATRFSEKASIGPSDAGTPTAGTSSSGNVAGPVAGGIVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAVIKAAVKTFKVTSLSSADEIRSARSAFMAEIDLMRTIPNHANIIELMGVCTQSDPNCMVLEFAAHGDLRHFLADSKVADFSSTDLLCFCIDIARGMDHLAKCEIVHRDLAARNCMVVAGPRAPNTIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSSKRLVPLHVTDHN* # ORIGINAL: g476.t1 original gene structure, not modified by PASA NODE_526_length_21814_cov_30.5601 AUGUSTUS gene 2621 4726 . + . ID=g476;Name=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS mRNA 2621 4726 . + . ID=g476.t1;Parent=g476;Name=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 2621 2682 . + . ID=g476.t1.exon1;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 2621 2682 . + 0 ID=cds.g476.t1;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 3289 3433 . + . ID=g476.t1.exon2;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 3289 3433 . + 1 ID=cds.g476.t1;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 3646 3909 . + . ID=g476.t1.exon3;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 3646 3909 . + 0 ID=cds.g476.t1;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 4244 4726 . + . ID=g476.t1.exon4;Parent=g476.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 4244 4726 . + 0 ID=cds.g476.t1;Parent=g476.t1 #PROT g476.t1 g476 MDISRRVALHVQGNASVQVRRMQSPFHPQRAGDCTPWMLQQFPYTVSISSGIPWNGIPWATHKFSIVQQVLKSTIETEKFGLILELEERHYERTLTIAEFFVLSHDLAVKNLGEGLLATLLKEKDLVVICDHLREAIARLRKGSTVSYYLKDIDAYDGDSLPQLKAVYRLLFDKMFPAHLVPGRAGFDALSLYIKEHDHIPGITLPFFYVGGFFSWFGLHLEDVDLSSVNFSLPIPPSLEAIFEQHSLGSVWKLWQFPHGSAVDFSNDLDNATNLGPGVALKSRGFYTFNRPVRDCNELGKLYFEASPTGTYMVSFA* # ORIGINAL: g477.t1 original gene structure, not modified by PASA NODE_526_length_21814_cov_30.5601 AUGUSTUS gene 6581 8232 . - . ID=g477;Name=g477.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS mRNA 6581 8232 . - . ID=g477.t1;Parent=g477;Name=g477.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 7716 8232 . - . ID=g477.t1.exon1;Parent=g477.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 7716 8232 . - 0 ID=cds.g477.t1;Parent=g477.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 6581 7497 . - . ID=g477.t1.exon2;Parent=g477.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 6581 7497 . - 2 ID=cds.g477.t1;Parent=g477.t1 #PROT g477.t1 g477 MEDVIVLTATEDSRNGVIHVRVRNRRKGSETVVQLRDYMTCDCPAFTFNKPAPCKHICAVIRHIDDTIDVAALNAFEPPDELKAKFRNLLSLSFPDAGSQGIDVCYLCQENPGDRKLVYPCPNCKKPVHTQCWKKGLRLTAVGTTAIACGLGCLTNILLSEEEVKLLGRKLEDMTMADPAKYSEPAASNLFADIEKETPAYLVTLAHTPRLRELDKNIRSVGPSLRFEKGAFVPGTRVISIRVAIDHVEEVKRRICEAYGRLEIDGIELQVREELKLQRQMLRMYDNHCVANANRPPAGVTRLGSYCAKVVPNSTALIGVFAVTTRHDFETATVVYDAHSAVSNVAVGRIANQHAHWDAMLVELVTSVDARVARLPHPPVIKDCVEALVYLAGGKTAQAFGKIVEAPPGGEVIVQKDATRDYRGSTFTQAGDCGSFWRLDKDGYDLPLGFHCAGNKVDIAAFVPLRSVFDDWGLRWG* # PASA_UPDATE: g478.t1, single gene model update, valid-1, status:[pasa:asmbl_7968,status:12], valid-1 NODE_526_length_21814_cov_30.5601 . gene 14689 17399 . - . ID=g478;Name=g478.t1 NODE_526_length_21814_cov_30.5601 . mRNA 14689 17399 . - . ID=g478.t1;Parent=g478;Name=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 17175 17399 . - . ID=g478.t1.exon1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 17175 17399 . - 0 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 16948 17036 . - . ID=g478.t1.exon2;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 16948 17036 . - 0 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 16526 16702 . - . ID=g478.t1.exon3;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 16526 16702 . - 1 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 16222 16381 . - . ID=g478.t1.exon4;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 16222 16381 . - 1 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 15671 16114 . - . ID=g478.t1.exon5;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 15671 16114 . - 0 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 15454 15520 . - . ID=g478.t1.exon6;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 15454 15520 . - 0 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 15229 15302 . - . ID=g478.t1.exon7;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 15229 15302 . - 2 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 15015 15144 . - . ID=g478.t1.exon8;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 15015 15144 . - 0 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . exon 14689 14895 . - . ID=g478.t1.exon9;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . CDS 14717 14895 . - 2 ID=cds.g478.t1;Parent=g478.t1 NODE_526_length_21814_cov_30.5601 . three_prime_UTR 14689 14716 . - . ID=g478.t1.utr3p1;Parent=g478.t1 #PROT g478.t1 g478 MSFFEETCVRLYNDDDRKTQEDTARIAALLKRFQTPYRGLANALIRKFGKELSISREQFYSAYNECRAVIPETDKDWFALQTLNAADDAHVFEQLIQAVWEEYNRKVQEQTQLRTEFNIFNEEKRIHMEAILQERAKVRAQRGHNELDASIEEVLRLSKEEYERKMEEKEQEAKMMQRALHESALEDERSRRRVHQFQERFDWELERAVRKSLMGGPDDSDDDEKASGSHASGADHRQRAAQSRSLQKLFRPELDPLDSEAISDALDMHNQSLTKFRAALLSQRGQQEAELRRRLAERERRNEQRPRSQNNLSRHASASDGEKDTMSSVVADAQTHARDSGDKDAVIEDPTKRPRVRTRKPGSNDAADVRPSTAEATSTALNHHDGFDAHAQTTKDGALQSDLQREASQRDKTPFPQGDDDDGKMQSHEQRIRTIRQRRQQRDETLRQYAQDNGLGKIWDSLNRPADDGGNANTDRIRSEHKRKDKGKGTDHVRDSPSSERVPTNDLKDRPPVS* # ORIGINAL: g475.t1 original gene structure, not modified by PASA NODE_526_length_21814_cov_30.5601 AUGUSTUS gene 652 1032 . - . ID=g475;Name=g475.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS mRNA 652 1032 . - . ID=g475.t1;Parent=g475;Name=g475.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS exon 652 1032 . - . ID=g475.t1.exon1;Parent=g475.t1 NODE_526_length_21814_cov_30.5601 AUGUSTUS CDS 652 1032 . - 0 ID=cds.g475.t1;Parent=g475.t1 #PROT g475.t1 g475 MSAPEELAIVEDASSPAQENTALADALAVIVSSQDMFRSVLAGVVNSTELVSKIAHSLSLQSEEARLQTDESIDLLCDFFQSVKTKTMTYCSLVKDIHFNMSATVASFCKCSVTFPAYEEASTCGL* # ORIGINAL: g4864.t1 original gene structure, not modified by PASA NODE_3550_length_3228_cov_34.1824 AUGUSTUS gene 112 3025 . - . ID=g4864;Name=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS mRNA 112 3025 . - . ID=g4864.t1;Parent=g4864;Name=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 2718 3025 . - . ID=g4864.t1.exon1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 2718 3025 . - 0 ID=cds.g4864.t1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 2204 2450 . - . ID=g4864.t1.exon2;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 2204 2450 . - 1 ID=cds.g4864.t1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 1267 1569 . - . ID=g4864.t1.exon3;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 1267 1569 . - 0 ID=cds.g4864.t1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 898 1010 . - . ID=g4864.t1.exon4;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 898 1010 . - 0 ID=cds.g4864.t1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 408 466 . - . ID=g4864.t1.exon5;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 408 466 . - 1 ID=cds.g4864.t1;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS exon 112 195 . - . ID=g4864.t1.exon6;Parent=g4864.t1 NODE_3550_length_3228_cov_34.1824 AUGUSTUS CDS 112 195 . - 2 ID=cds.g4864.t1;Parent=g4864.t1 #PROT g4864.t1 g4864 MLTCLGLSLQKPKDSVKARAAAGTSSNGNGNGKNGGKTSGKTGGSDKAKSKGKGGVKMVRPPTAPSGGDESDSDVSADDVAFFTEQGRSAGFLASLDVDRLSRIELKVGKAKDADDIDAPIPTAGSKRKSEEPPQPRKRVRTQGNDDSDADEDVISRAETGRRVSSSWKVAEADKPARLPLKDSKGSIIRPKEHLQIDPSAKRAEMSESEEEIIDSDNDDDVDADDARAVELEADRKKAGETKAQGAPDAAEEDADPVDTLRKRLAFAREEVARLAAVILEEPQEHVKDFLAIAEFYKSPTESVAVRKIAMLSAYGVFKDILPGYRIRPLTDEEKGQKARDAGYVKKLRDYEEGLLKYYQQYLMFLEKTLK # PASA_UPDATE: g3594.t1, single gene model update, valid-1, status:[pasa:asmbl_7159,status:12], valid-1 NODE_4267_length_1906_cov_36.4058 . gene 928 1868 . + . ID=g3594;Name=g3594.t1 NODE_4267_length_1906_cov_36.4058 . mRNA 928 1868 . + . ID=g3594.t1;Parent=g3594;Name=g3594.t1 NODE_4267_length_1906_cov_36.4058 . five_prime_UTR 928 1009 . + . ID=g3594.t1.utr5p1;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . exon 928 1012 . + . ID=g3594.t1.exon1;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . CDS 1010 1012 . + 0 ID=cds.g3594.t1;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . exon 1248 1317 . + . ID=g3594.t1.exon2;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . CDS 1248 1317 . + 0 ID=cds.g3594.t1;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . exon 1673 1868 . + . ID=g3594.t1.exon3;Parent=g3594.t1 NODE_4267_length_1906_cov_36.4058 . CDS 1673 1868 . + 2 ID=cds.g3594.t1;Parent=g3594.t1;3_prime_partial=true #PROT g3594.t1 g3594 MAFVKVVKNKAYFKRYQVKYRRRREGKTDYYARKRLIIQDKNKYNTPKYRFVVRFSNKSVVCQIAYAKIEGDVILAAAYSTELARFGIT # ORIGINAL: g10794.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 6019 6366 . + . ID=g10794;Name=g10794.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 6019 6366 . + . ID=g10794.t1;Parent=g10794;Name=g10794.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 6019 6366 . + . ID=g10794.t1.exon1;Parent=g10794.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 6019 6366 . + 0 ID=cds.g10794.t1;Parent=g10794.t1 #PROT g10794.t1 g10794 MERFIPTYDKLDRADKVPRRAWDARVRCASTVERSSSPVRLHRDGWRCNVTLPSTETGDARPTIDASDGLSVMLTLPPIDIMNQLLKAVEGREVLVLATPTDPPMAKGATSVSVA* # ORIGINAL: g10791.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 3198 3650 . - . ID=g10791;Name=g10791.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 3198 3650 . - . ID=g10791.t1;Parent=g10791;Name=g10791.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 3198 3650 . - . ID=g10791.t1.exon1;Parent=g10791.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 3198 3650 . - 0 ID=cds.g10791.t1;Parent=g10791.t1 #PROT g10791.t1 g10791 MPDVVGRGSSGAFSTISSMATRTSDDSCADDGISTSPSMPRHQQGIMEGVDGMRGVGGVCANPDANPDGSSSSSSRMSPTSQNVHEAIKTSSQHVILGELWSILEEARLLAELVHPHVLRLVGVCTSEPPLFISTGVRRPPRFFTRSQGG* # ORIGINAL: g10790.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 145 2426 . + . ID=g10790;Name=g10790.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 145 2426 . + . ID=g10790.t1;Parent=g10790;Name=g10790.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 145 2426 . + . ID=g10790.t1.exon1;Parent=g10790.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 145 2426 . + 2 ID=cds.g10790.t1;Parent=g10790.t1 #PROT g10790.t1 g10790 DATATAYARPTRAPMPKAAQPALSPNSPISTLDQCMPLTKTYTAIKSQIKTCTEALRQCISDCDGLAQKIGLETNGLAETHKLLDENAEYEKELAVYFPVYGAVKAGKSTLLSCLTRTTILPSRPLPMTTIPIKILHKGGTEGISLVIPNAEQWNACIAAVVKTKTLPTGKDLPKHLKTLPEHVTTLFRKAKEGSVRFKTGTLRDADAIAEELTLLSDVARLCFLLKVDFATYNIDLSLEHLPLITMDIAIFRNLGVDRPFYLVDTPGPNEARCDEFLEKINQRVLDGSKGALFVVPPLQIATRDTEAMLGNIADSRHKILVALNQVDTMTDKVTQLPAVKEQLKKLLEEANCPFEIIPVSSSRIKMMCELQAELDSPGRGGFAKSAIWTQVVKAMSINEQQLVDVETYARKLVPQELETYNATELVKAVKGIYLDSEEFALQTRVQSLTVVRKALDVFMRQIATSMKDKVAQDNELVKLNKALVDAKRFRAEVQLLVDTLLAHTLHDIFAREREDFFVLTKKLVMENFKLKILNADNPMDNSLRFTNKNMLMDWCYQQTEFATRTIAAKCDGFLDKVRARTSEVVKHEWQKLQRLLTDIEDNVGERSKRMETTLSQPPTLTLRRPTYKLDTEDIYDEFKELVANVTVPKGVVITDTDKFVDVVSQYLLKTASSFANAAYARFEESLEAVLAKFQVRAEEYVRRVDDLIKCQKGLQTSQRGKHLSQLLLCETRASANYEKAKVQVSALRAALGLPPDDE* # ORIGINAL: g10793.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 5027 5967 . - . ID=g10793;Name=g10793.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 5027 5967 . - . ID=g10793.t1;Parent=g10793;Name=g10793.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 5689 5967 . - . ID=g10793.t1.exon1;Parent=g10793.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 5689 5967 . - 0 ID=cds.g10793.t1;Parent=g10793.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 5027 5470 . - . ID=g10793.t1.exon2;Parent=g10793.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 5027 5470 . - 0 ID=cds.g10793.t1;Parent=g10793.t1 #PROT g10793.t1 g10793 MVNGSVTVNDNSSLVTVNGSFSALLTAGALVLLDSEHVTDVAESFGRLRFVGGDVTLSMNPRLTAFGGLGSLERVNGSLQLIDSVLGFVLAIGTQLPDFQGLHGLRALGGALVVFDNNDLQSLRGMEGLRGAIGGFAAGRNPVLSSLATIGGSRLLDAGGVRALNSAAARVFADKALMGALVANHHVNGTFNATAVDPDERHICSGGVAATTFLPPFAPPSSHQVGTGTILPNDLALQRG* # ORIGINAL: g10795.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 7696 9882 . - . ID=g10795;Name=g10795.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 7696 9882 . - . ID=g10795.t1;Parent=g10795;Name=g10795.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 7696 9882 . - . ID=g10795.t1.exon1;Parent=g10795.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 7696 9882 . - 0 ID=cds.g10795.t1;Parent=g10795.t1 #PROT g10795.t1 g10795 MASVVDRMDACMPDANHFSMPPKLVAAISGRTRECTALLRQCISDCDGLAVKIGLETSGLEESRKRLGDNAKDSRELAVYFPVYGAVKAGKSTLLSCITRTTILPSRPLPMTTIPIKILHKGGTEGVSLVIPNAEQWNACIAAVVKTKTLPTGKEHPEHMTTLFNNAKEGLVRFKTGILRDADAIADELMLLSDVARLCFLLGVDLANYKIDLSLEHLPLITMDIAIFRNLGVDRPFYLVDTPGPNEARCSTALEKINQRVLLESNGALAVVPYNQIESRDVSVIMGNVVHTCAEEGKRLLVAVNQIDSMTDRVNELPAVIEQLRKNMGTLKTYDIIPVAASRIKMMCELQAELDSGRAGFAESKIWMQVVEAMGINTEQLDVKEYARKLIPQELETYNAVDLVKAIKGIYLDSEAIALKGRVDELNLVCNALTEFSKQIETSMDGVEAQAKKLADITAVIDGVKHFQETVAHVRPTLEKELRVIFNRLREKFVAWSKTQEWSIVDGDTMKRLERCSFPNRFKARAWSVAQGEARIMPRVTEKFNEFVENVLREVPDAVDTQWATITKLTGKIDGLIGQEADAMVLTYRAPPTLHFEKPKITFYVKSMGIPEHASADGKVTIITNEFTEAVLRYFIKQSSAYADAALACFEESLATVLVKFEDAATRFKKQADDMMKVQKELQEKAHLHATELKTFVTRVTASIETARLKTEALNAELESVALQKRKN* # ORIGINAL: g10792.t1 original gene structure, not modified by PASA NODE_1647_length_10019_cov_49.7701 AUGUSTUS gene 3675 4087 . - . ID=g10792;Name=g10792.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS mRNA 3675 4087 . - . ID=g10792.t1;Parent=g10792;Name=g10792.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 4084 4087 . - . ID=g10792.t1.exon1;Parent=g10792.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 4084 4087 . - 0 ID=cds.g10792.t1;Parent=g10792.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS exon 3675 3976 . - . ID=g10792.t1.exon2;Parent=g10792.t1 NODE_1647_length_10019_cov_49.7701 AUGUSTUS CDS 3675 3976 . - 2 ID=cds.g10792.t1;Parent=g10792.t1 #PROT g10792.t1 g10792 MDYAVVDSERRADAGVARDASRQQHSASAASKKSRFSRARAAKSSSSTTTATAASNSNNSNTGNSTSTGAASDAPLFRKRETGTASSSVSASTWSSNYWAL* # PASA_UPDATE: g6956.t1, single gene model update, valid-1, status:[pasa:asmbl_653,status:12], valid-1 NODE_1176_length_13379_cov_39.4011 . gene 10388 13363 . - . ID=g6956;Name=g6956.t1 NODE_1176_length_13379_cov_39.4011 . mRNA 10388 13363 . - . ID=g6956.t1;Parent=g6956;Name=g6956.t1 NODE_1176_length_13379_cov_39.4011 . five_prime_UTR 13353 13363 . - . ID=g6956.t1.utr5p1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 13334 13363 . - . ID=g6956.t1.exon1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 13334 13352 . - 0 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 12598 13119 . - . ID=g6956.t1.exon2;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 12598 13119 . - 2 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 12293 12418 . - . ID=g6956.t1.exon3;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 12293 12418 . - 2 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 12020 12102 . - . ID=g6956.t1.exon4;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 12020 12102 . - 2 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 11713 11752 . - . ID=g6956.t1.exon5;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 11713 11752 . - 0 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 11367 11445 . - . ID=g6956.t1.exon6;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 11367 11445 . - 2 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 10891 11042 . - . ID=g6956.t1.exon7;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 10891 11042 . - 1 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . exon 10388 10682 . - . ID=g6956.t1.exon8;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . CDS 10561 10682 . - 2 ID=cds.g6956.t1;Parent=g6956.t1 NODE_1176_length_13379_cov_39.4011 . three_prime_UTR 10388 10560 . - . ID=g6956.t1.utr3p1;Parent=g6956.t1 #PROT g6956.t1 g6956 MDETNTPASMDAGVSQLSLRVNFGASFKFFPKDASASIRIPSIASADTARVGEYQRRAKEVISVPNAKEEMAAELSAQGATTRKQQYMNSLQFQRQRCFSSFPRAVHRRVAAAFRIQRAWRRYKGRQLLRKMKETQNRAARIIQRNVRAILPKILKKKNNAALVIQRNWRRVVAMRLLKICKKYRRALHQLDLKAKVIQRAFRTYLAINNSPVKKAQRIRQRQMENASIRIQRWIRPILARRREAFYLSKRVEAAIVIQSVYRGHLLRRLLRPDLRDRLKALGISIARRRRDLLRHKAAYVLQRSWRRYMCVKVYRLKSETARKAATRIQSAWRGYYWRLHLHRNFEYGQYLFLEAFAKRLRDVHFITNRFRPTFLVCPK* # PASA_UPDATE: g6954.t2, single gene model update, valid-1, status:[pasa:asmbl_650,status:13], valid-1 # ORIGINAL: g6954.t1 original gene structure, not modified by PASA NODE_1176_length_13379_cov_39.4011 . gene 1383 3686 . - . ID=g6954;Name=g6954.t1 NODE_1176_length_13379_cov_39.4011 . mRNA 1383 3686 . - . ID=g6954.t2;Parent=g6954;Name=g6954.t1 NODE_1176_length_13379_cov_39.4011 . exon 1383 3686 . - . ID=g6954.t2.exon1;Parent=g6954.t2 NODE_1176_length_13379_cov_39.4011 . CDS 1791 3686 . - 0 ID=cds.g6954.t2;Parent=g6954.t2 NODE_1176_length_13379_cov_39.4011 . three_prime_UTR 1383 1790 . - . ID=g6954.t2.utr3p1;Parent=g6954.t2 NODE_1176_length_13379_cov_39.4011 . mRNA 1383 3636 . - . ID=g6954.t1;Parent=g6954;Name=g6954.t1 NODE_1176_length_13379_cov_39.4011 . five_prime_UTR 3462 3636 . - . ID=g6954.t1.utr5p1;Parent=g6954.t1 NODE_1176_length_13379_cov_39.4011 . exon 1383 3636 . - . ID=g6954.t1.exon1;Parent=g6954.t1 NODE_1176_length_13379_cov_39.4011 . CDS 1791 3461 . - 0 ID=cds.g6954.t1;Parent=g6954.t1 NODE_1176_length_13379_cov_39.4011 . three_prime_UTR 1383 1790 . - . ID=g6954.t1.utr3p1;Parent=g6954.t1 #PROT g6954.t2 g6954 MGYHDHHVESSNGRQLLCGILRRFRKLCVFVTVVGAICLVALTVAVRCGHVKADEWTSSIEIRFGSAVAGHFNSIMGPLALDPDAMQGMAPGDTRLPEERTQAAAESDAQLTASPAVPTGATLMAVGDISFARDITTIGIDRFNSNFTYPFWHISHVLRDADITFGNLESPLIDMVKDIGQNANELAADKRIVINGHPQGVRALKFAGFDVVSLANNHMLDFGKPGLQATLRYLNRGNMKFVGVTNGYYGDAAQRPSTIRTKGGLLFAFLSYCHDDLAACTRARSVNGAGASLYSDMAARRDVMRLQRRFPKAKLVVVVAMHWGTEYELRPIPSQIKAARFLASLGVRIIVGHHPHVLQKHEILNVRLASDPTVINRAFVGYSLGNFLFDSHVCYNAEGTKLDFENSFACMNNVAPSMRRVVAQEVRRSRIYRFKLDANGLLEDAEYMPVNIVSTPEDPIYQPVPEEKPAFWADIEMNAPGASSPGTSAAAVAPVPELIRRTADSRGNDIVTASAAPVTPGGESSEHAGAQKRNVTSYNADRRINESINETRKLSEAELNESAELNEASESEDQPKSDMTPFEAEVVDDPEPMELIPLWNIAEKAHGLLPRGYWVRVCTGRDSNCRRVGSE* #PROT g6954.t1 g6954 MGPLALDPDAMQGMAPGDTRLPEERTQAAAESDAQLTASPAVPTGATLMAVGDISFARDITTIGIDRFNSNFTYPFWHISHVLRDADITFGNLESPLIDMVKDIGQNANELAADKRIVINGHPQGVRALKFAGFDVVSLANNHMLDFGKPGLQATLRYLNRGNMKFVGVTNGYYGDAAQRPSTIRTKGGLLFAFLSYCHDDLAACTRARSVNGAGASLYSDMAARRDVMRLQRRFPKAKLVVVVAMHWGTEYELRPIPSQIKAARFLASLGVRIIVGHHPHVLQKHEILNVRLASDPTVINRAFVGYSLGNFLFDSHVCYNAEGTKLDFENSFACMNNVAPSMRRVVAQEVRRSRIYRFKLDANGLLEDAEYMPVNIVSTPEDPIYQPVPEEKPAFWADIEMNAPGASSPGTSAAAVAPVPELIRRTADSRGNDIVTASAAPVTPGGESSEHAGAQKRNVTSYNADRRINESINETRKLSEAELNESAELNEASESEDQPKSDMTPFEAEVVDDPEPMELIPLWNIAEKAHGLLPRGYWVRVCTGRDSNCRRVGSE* # ORIGINAL: g6953.t1 original gene structure, not modified by PASA NODE_1176_length_13379_cov_39.4011 AUGUSTUS gene 219 1050 . + . ID=g6953;Name=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS mRNA 219 1050 . + . ID=g6953.t1;Parent=g6953;Name=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 219 413 . + . ID=g6953.t1.exon1;Parent=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 219 413 . + 2 ID=cds.g6953.t1;Parent=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 612 826 . + . ID=g6953.t1.exon2;Parent=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 612 826 . + 2 ID=cds.g6953.t1;Parent=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 973 1050 . + . ID=g6953.t1.exon3;Parent=g6953.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 973 1050 . + 0 ID=cds.g6953.t1;Parent=g6953.t1 #PROT g6953.t1 g6953 RRTAWRAPLPPPRRLWPTPQTRPISLTRQPQSSSSLVDARAHSATSPLFACRARALHLLVEAPGQFSIPTTHRSLCAALKRPPTLYISLTVTAPCTARIRRQTLRSTKSTHPTRSQPQPHLSAHSSSRPTSVTTGGRVHFRQTVGASLGPTGPMPLCGIAVS # ORIGINAL: g6955.t1 original gene structure, not modified by PASA NODE_1176_length_13379_cov_39.4011 AUGUSTUS gene 4828 10186 . + . ID=g6955;Name=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS mRNA 4828 10186 . + . ID=g6955.t1;Parent=g6955;Name=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 4828 5215 . + . ID=g6955.t1.exon1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 4828 5215 . + 0 ID=cds.g6955.t1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 5440 5512 . + . ID=g6955.t1.exon2;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 5440 5512 . + 2 ID=cds.g6955.t1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 5629 5776 . + . ID=g6955.t1.exon3;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 5629 5776 . + 1 ID=cds.g6955.t1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 6014 6203 . + . ID=g6955.t1.exon4;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 6014 6203 . + 0 ID=cds.g6955.t1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 6378 9524 . + . ID=g6955.t1.exon5;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 6378 9524 . + 2 ID=cds.g6955.t1;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS exon 9795 10186 . + . ID=g6955.t1.exon6;Parent=g6955.t1 NODE_1176_length_13379_cov_39.4011 AUGUSTUS CDS 9795 10186 . + 2 ID=cds.g6955.t1;Parent=g6955.t1 #PROT g6955.t1 g6955 MAELILAGRMDCQALRARSASSPAEALSPLLRLAGRSGSGGCGAGSVMRSSGDADSASARRGETSPERPQSPSDDPENDEEDEQNEGSYASERNGRGAAPVWLQGASVHLSPDGEYGLYCTKSRFVVMQVETTATTAEAQYRITGEGSGCDDESENITCAILLSIQRASPSSSVGATAAQRSALSRTCAVIGYSTGKIRIYTEDGRMLFAQLLHAGRVRRLRLRTCHPHLTDQQEDLSILYPDALVTIDGFSLFQCLRACISQADKAASPDQAINAPPLSFKKWGLSGQEDTSDFVSFCKPPQTAYDHLILLASGAPSLSVAAGFAQHHVNPSTLNYLAVGKSPYVAHYSPLDGGRQLSAVAIASTVATKITSAVYSLAKSWWTGGAAAPEQTPSSGTAAQESGAALEPAVPLPPVDAVVDPSRRGARLWADPYGELVAVADHFGRVVVFDVSNGTPIALRMWKGYRDAECAWIVADERDRDSGGRGGVGRSVLFLAIHAPRRHLLEVWPPRHGPRISAFNVGSGCQLAYPGCGILGAASSVPQSAPSTGLRRSPKCSGAFLVDPDGSVRSVSVPFHCALDAESGRKSKDTHTVAKIRLLVGEQRGGSGGVSALESGVVSLVSTLATGASLVEAFGIVLHSPLVAPETLSTVLSAAIDRATAIGAPASSELSVLLAKRRLVNLHAGLCQSLPAIRTRGVSPGLPRAELAAFGLADDRRTSAEDALGETLIRCSDVMNAAMDRWLASPVLMPVSRFVSSFEASLAAPLLGDGGTAVSLAPAGEPELELLSRFTFQCICSGFFHPSQALDTLISSGLPPDAILSLLARFALSAPLRLVACLPASEYMASMFSSLGAAADEAGASCSWRAPILHGLSHCPAASSALFVALAVLSATDDAHAARPEVDLLSRRLEDVLRLSNALDVQLDACPTVTHLVTSSHPSKLIAAYIAGRRVPASAMSLIVSAVLLASPTVANALDNAPTSVTSKGDAHASARVEALLRRLPFVTPDELFACIAEEALRRWSADPDAKEGNSWLKYGVEYASASFDFTKNGIHVPADGISGAGLAVSLWDEWFLPRLKALSALIEKVNKAPKERLLRKTVGLGPDQCVRMAVDAARIAALIVRAPRPSEADSAHASAPHSLSLASRRWSSDVRAQMLCDRALAASNSIRRLTDVQVDALRGFAGALRALCHSLGLILQVNVRGVKPTLLFGDAHRRLLFTPLSATVAAGLVGDPKDMDVKVAAGGSVVATRNQLVSSSLQTSPDGVDAQFAMQLADAFGLDLDPLRLLRVVRLFETGKDAAGHSLTIEVKDRPALGARLLSVASKRIARMLLTGNAAIDAGIAARLPSTTFEWLLQQRDAPPPPNSASEATVQSPTDGWEDADVSAVTLTAPQQASDPSTECNADTLSAAHSLVQRAAELLPRDHVTQQVADRLLQVLEAAGVST* # PASA_UPDATE: g11341.t1, single gene model update, valid-1, status:[pasa:asmbl_9515,status:12], valid-1 NODE_814_length_17385_cov_42.8514 . gene 12609 13917 . + . ID=g11341;Name=g11341.t1 NODE_814_length_17385_cov_42.8514 . mRNA 12609 13917 . + . ID=g11341.t1;Parent=g11341;Name=g11341.t1 NODE_814_length_17385_cov_42.8514 . five_prime_UTR 12609 12654 . + . ID=g11341.t1.utr5p1;Parent=g11341.t1 NODE_814_length_17385_cov_42.8514 . exon 12609 13917 . + . ID=g11341.t1.exon1;Parent=g11341.t1 NODE_814_length_17385_cov_42.8514 . CDS 12655 13866 . + 0 ID=cds.g11341.t1;Parent=g11341.t1 NODE_814_length_17385_cov_42.8514 . three_prime_UTR 13867 13917 . + . ID=g11341.t1.utr3p1;Parent=g11341.t1 #PROT g11341.t1 g11341 MRVVVSPLSALLRRSRGAASTAIPTLTALELLSRARRPALSPLHSRSAHTSSTANMATPAAAEAHLPNLRAVDGVLGAVGHTPLIRITSLSRETGCDIYAKAEFMNPAGSVKDRAAKRIVTDAEAKGLLVPGKGVIVEGTGGNTGVALAMVAKERGYRALFTMPDTVSQEKIDLMTLFGAEVVLRPVLPFSDPEHYFHTAERIAKEREGGFFANQFENTSNFDAHHEGTGPEIWQQTGGRVDGFVCASGTGGTMAGVSTFLREKRPDVAVHLVDCQGSGLLSYVEQGEFVSDGKTITEGIGIMRLTANFAKARVDSAFLCTDREAVEMGYYLLREDGLFIGPSAALNCVGAVKLARKLGPGHSIVTVLCDGGDRYRSKMYNPKWIGEKGLSPEWTRKDVGFVL* # PASA_UPDATE: g11342.t1, single gene model update, valid-1, status:[pasa:asmbl_9512,status:12], valid-1 NODE_814_length_17385_cov_42.8514 . gene 14484 17364 . - . ID=g11342;Name=g11342.t1 NODE_814_length_17385_cov_42.8514 . mRNA 14484 17364 . - . ID=g11342.t1;Parent=g11342;Name=g11342.t1 NODE_814_length_17385_cov_42.8514 . five_prime_UTR 17346 17364 . - . ID=g11342.t1.utr5p1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . exon 17237 17364 . - . ID=g11342.t1.exon1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . CDS 17237 17345 . - 0 ID=cds.g11342.t1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . exon 16822 16953 . - . ID=g11342.t1.exon2;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . CDS 16822 16953 . - 2 ID=cds.g11342.t1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . exon 16348 16476 . - . ID=g11342.t1.exon3;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . CDS 16348 16476 . - 2 ID=cds.g11342.t1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . exon 14484 16128 . - . ID=g11342.t1.exon4;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . CDS 14882 16128 . - 2 ID=cds.g11342.t1;Parent=g11342.t1 NODE_814_length_17385_cov_42.8514 . three_prime_UTR 14484 14881 . - . ID=g11342.t1.utr3p1;Parent=g11342.t1 #PROT g11342.t1 g11342 MEIGLPRIVLAAMGRFDDDAMLQNYALGVCRNISYTKDYRSFMAKSGAVDLAWRAMALHADDDEIQNSACAFFFNTVIELPENGRLVVESRDALSILCRVMRHHARNDALTKKFQGLLKLIGRDGSRIVPDHDVACMSLQELGLRAVADHLPDPPEIQVPRKLAAELSRASQCVNCGRHYFSSSFAAAVKVDRTWTIEVFCSRACAIEMYAPPPLPIVASPESAGPVRKGTSRSNGAGSSASHVAGSSPVHSLLDGGLPYHMQRASQAVTTPLPSSTPTLALRIQNGESGVHTAESGGDSGDSSSGETGVPSADARAADARRHNGINDRPASRIEIPDFLGSEGADGSGAGGVSAPSAGPSTTYAGDVLWDTIRNGLSESGLFSAENSGDEEEIGEPDNDDGFVHVDSDEIGDGFDAMIGMPTERSRRRSSLAGRFEVLASRFAVGRRSQTSPSAPQPESAYPQPDVAQWLPSLSSGASAPHTAGSVTHAHAHAHAYADTQRSHDSHVRQSSDRPLGKRAASATPKCMEKMRKARKLA* # PASA_UPDATE: g11340.t1, single gene model update, valid-1, status:[pasa:asmbl_9511,status:3], valid-1 NODE_814_length_17385_cov_42.8514 . gene 11499 12352 . - . ID=g11340;Name=g11340.t1 NODE_814_length_17385_cov_42.8514 . mRNA 11499 12352 . - . ID=g11340.t1;Parent=g11340;Name=g11340.t1 NODE_814_length_17385_cov_42.8514 . five_prime_UTR 12186 12352 . - . ID=g11340.t1.utr5p1;Parent=g11340.t1 NODE_814_length_17385_cov_42.8514 . exon 12116 12352 . - . ID=g11340.t1.exon1;Parent=g11340.t1 NODE_814_length_17385_cov_42.8514 . CDS 12116 12185 . - 0 ID=cds.g11340.t1;Parent=g11340.t1 NODE_814_length_17385_cov_42.8514 . exon 11499 11910 . - . ID=g11340.t1.exon2;Parent=g11340.t1 NODE_814_length_17385_cov_42.8514 . CDS 11648 11910 . - 2 ID=cds.g11340.t1;Parent=g11340.t1 NODE_814_length_17385_cov_42.8514 . three_prime_UTR 11499 11647 . - . ID=g11340.t1.utr3p1;Parent=g11340.t1 #PROT g11340.t1 g11340 MESQQARQAVKDRLKTDVGFLPKDAIGWLYAARGFYKMKDYHAVVECVSHSLRNEKTKKEAQHLLAFSLLHTGQPSAAASAFFKSISFGNDTDWQPLVELFLDNPDLKFT* # PASA_UPDATE: g11338.t1, single gene model update, valid-1, status:[pasa:asmbl_9514,status:12], valid-1 NODE_814_length_17385_cov_42.8514 . gene 973 7845 . - . ID=g11338;Name=g11338.t1 NODE_814_length_17385_cov_42.8514 . mRNA 973 7845 . - . ID=g11338.t1;Parent=g11338;Name=g11338.t1 NODE_814_length_17385_cov_42.8514 . exon 973 7845 . - . ID=g11338.t1.exon1;Parent=g11338.t1 NODE_814_length_17385_cov_42.8514 . CDS 1033 7845 . - 0 ID=cds.g11338.t1;Parent=g11338.t1 NODE_814_length_17385_cov_42.8514 . three_prime_UTR 973 1032 . - . ID=g11338.t1.utr3p1;Parent=g11338.t1 #PROT g11338.t1 g11338 MDAIGQLLPVPISPTGAHASPQDATDFFLTALRMRNPPLRDAILAASADPSLSSSERTIVQMLHAASQRPIQATRLADLCHTLRHQQEAHPIGAVESARVANVLSDQAALALITAGTMFTGIPQSLAARAGKHAVKWVGRQMITVADRSDAMAATCDPDSVVYEVLTEGGSSWRLIGTALTAQSRVAAALRDGFVSGVSGSVALLRHLDPHYKCGGCGVCTGAGALSSSSSSAAAAAAAAAGGSPGGNGGAADGGSSAVDTYRYLEETAERLALMGTHVENQLRCVRRMGGDALSLPATDARSTISLAVGQADMSVDIAPSNNTATATTGHAPGAVQAGSPAPAQGMPLRGAPVGGSNQAAKLKLLDGTAAAVAQKFADSGDVQQLYAKFCTRTNAGGAGAGATADDAAVAQRGGDLLSFLEGVDAWAKQREETGRWLRCADSVSSMTSQVALASKSRDMARFSAGVGATVNAVSGFREFSNGQKLLSAATQAGALSSSLVAGFTSVFSGVGLVLGAVGVLSSLFGRKERASSRPDFSAATYSAVMAMWGEMRNGFTQMQQRFDEVASQVGYMSLSAESNHLDAMEELYRTRQSIEAQIDRLAATVGDGVARILQTMARVQLDQRKQHISLALMDVMRTVNDAMVPPATPIECLGKMSRLVGAFGESGSQHPAFSGPGISEPSVQRAAPPGTNVAPTPEASSFARAVEAIDHPAFFLTSLLSYARSVLPVHSVVYTRSQMGVVVRALQSTQRARATGAGGVANAADVRILDPVGIESIIPAQSGRTTLSVRPVEQLLSTAVSPSVSEGRSAVAVVPVEFCGSWVVLVYGDGPTVQGLRASVSDGTHTSRQYFMVLGLSEMTALCAGQLAAVCPNVRGRERAFPTSVAPNNCGAYAAHLMDGLSRGVVSPSALWDGTQSPPAPPATFVEDIAAVVVAHNGKFPLPTVQEQTLGNPLLDWWICLGIERLLAVFHDDPSHPHATVPDDVLNVLASALGRVSGASQLSAIGLDGRLHDFLLDRLAGATESFARALDAAAMDAADRQANGENARVHAVATSTEGVLRSADMAKENLGADIKPRLRFEGSNMFTGGYQGHHHYATNTDIIPGSGFSGTVAFDATERRFKDAYELDRKKDMDEIVIATAAAVNAVRRGFQVTHSLRDTFLGVGTPHCALSQGIAVGLPTLLVPAGDAGALTMAADSPLPYLRAPRYLFDVLPPSVATAMQLGLVRVRFTYQLSANRFIISGEWAPVTDVPPMQGLANTWIACCRRSLPYTPLFYTGAEAVFGFWYGGRMPVTQNGVHHYTKSACNPAQTCTDRIWVYIPQIVSRPAAVATVDVRALTEELAGTVVAGQCGILEIRIAAWTSGLQRRTSAALADIVRANQDLSCATPLATSLQQMGAYMHLLEAYNALLVMAFPAHASRLTAAMQLPGAYFDTAAVLGCLSDPARGVAALRRFAAERNQICARLRVQVRDAVAAVARGSSLSAFADTSLLLRSRIVERLPVCGRRLPWRRERIGTLDRTIDLSRRQLEQALMPRGDPMFHAALRQELARSAEVSATLRGQLAANEQHEAEANATLHDLLPQLDARVGAITREHNRVVALVSAGIVNPNAAHAIEQLGRRLLDARENVARAIQYAALDGGALALFACEAAAAAAGNASGTAADWMSTQAGALSILSGVPDAPDTTVTKCDGCATGNTPLRRSADTLRAELGRLERTNDLAGLQAVLDATGADGSTLLHEAVKHDDYDLAVLLLSYRPTLTLRNGDGLTAEELLEHMAEVEVGVANAPSNGRVPHNRPPVELTAGAGQGSALDAVAPRGAIRDAFAVHHEIAEASSAYGVAIHRLLFLLGEGVKHVNSIAVDHGVPAVFVHGRTGTGKTTLVSYLGGCTYARDLDLDAGTDRMRLLSGTELGTVGHCSVSETLYPGVYPMSVPRRTAVGTDGPAEPTCCETSESRVVVVDLAGVGDNRESGDEAAVNHFDVVSAVCMQYLASAIGAVGGIIVTVTEDDVMDARGDGVLVVARQIGRVLKAGPDQMKSRIALAVTKSVRGLRPAGVASRLSKIVGDHGGQSNSDDGMDLRAFCDALCTPEGQSRIVCVDESGPETRTTLMGMFGAWACSPIDMAALSFASFSRSVEHFRGLVDHLSNKRHIRQMRRDELEAQCAELRSAVAVSLRTGLLHAQCATALAAIVNIADGESLSAMRGIVSDLLVATGGADLSRTVDGWCGVHSTVCEAERELRLLERRRIVEYDLYRGLDSLVNACSLRLADEK* # PASA_UPDATE: g11339.t1, single gene model update, valid-1, status:[pasa:asmbl_9516,status:3], valid-1 NODE_814_length_17385_cov_42.8514 . gene 8338 11252 . + . ID=g11339;Name=g11339.t1 NODE_814_length_17385_cov_42.8514 . mRNA 8338 11252 . + . ID=g11339.t1;Parent=g11339;Name=g11339.t1 NODE_814_length_17385_cov_42.8514 . five_prime_UTR 8338 8398 . + . ID=g11339.t1.utr5p1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 8338 8507 . + . ID=g11339.t1.exon1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 8399 8507 . + 0 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 8650 8788 . + . ID=g11339.t1.exon2;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 8650 8788 . + 2 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 8966 9092 . + . ID=g11339.t1.exon3;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 8966 9092 . + 1 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 9233 9319 . + . ID=g11339.t1.exon4;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 9233 9319 . + 0 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 10430 10500 . + . ID=g11339.t1.exon5;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 10430 10500 . + 0 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 10750 10904 . + . ID=g11339.t1.exon6;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 10750 10904 . + 1 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . exon 11045 11252 . + . ID=g11339.t1.exon7;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . CDS 11045 11103 . + 2 ID=cds.g11339.t1;Parent=g11339.t1 NODE_814_length_17385_cov_42.8514 . three_prime_UTR 11104 11252 . + . ID=g11339.t1.utr3p1;Parent=g11339.t1 #PROT g11339.t1 g11339 MGSGSDRPVYFAGFPRKYTVDDVREFLEKRGTVERIDMKEGFAFAYFESSRDAEDAVNDLNGRDMEGRRVRVEFANGRGQVKKREDQRKRAIAPNPTLFVVNFDPQRTTAKDLEEAFIRFGRLERVDLRKNFAFVQFQATEDAKAALAEMDGGKVLGWTITCEYAAKESSSGAGGDRGRARSRTPSPRRRSPSPHRNRRSPSPRRRSPSPRRRSQAQGAAAQAQGAGVPARAVVRLERCFCRGQRTSA* # ORIGINAL: g771.t1 original gene structure, not modified by PASA NODE_4576_length_1443_cov_58.1082 AUGUSTUS gene 2 479 . + . ID=g771;Name=g771.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS mRNA 2 479 . + . ID=g771.t1;Parent=g771;Name=g771.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS exon 2 85 . + . ID=g771.t1.exon1;Parent=g771.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS CDS 2 85 . + 1 ID=cds.g771.t1;Parent=g771.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS exon 320 479 . + . ID=g771.t1.exon2;Parent=g771.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS CDS 320 479 . + 1 ID=cds.g771.t1;Parent=g771.t1 #PROT g771.t1 g771 SPVPCAADGNVLCVVRPSDEDEHATRVQDHHHGRPRGHSVQLLPPMVRCHLSRQRCVRHHLLLPCAPQVGRTNARAQADPI # ORIGINAL: g772.t1 original gene structure, not modified by PASA NODE_4576_length_1443_cov_58.1082 AUGUSTUS gene 828 1325 . - . ID=g772;Name=g772.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS mRNA 828 1325 . - . ID=g772.t1;Parent=g772;Name=g772.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS exon 828 1325 . - . ID=g772.t1.exon1;Parent=g772.t1 NODE_4576_length_1443_cov_58.1082 AUGUSTUS CDS 828 1325 . - 0 ID=cds.g772.t1;Parent=g772.t1 #PROT g772.t1 g772 MEHILVQLLSIDPSACAFNAGVFVADMYRWRRANLTSHLVRYLEENTRTLLYGAGRGGGGSQPPMLLAFYKQHAGLPADWHVRHLGWGAGNRHNEETLEMAKLLHWNGKAKPWTKEATPRLANIWRKYALRPPAELRTAFQKGSFARKGGYRREDEAEDNGDGLV* # PASA_UPDATE: g3741.t1, single gene model update, valid-1, status:[pasa:asmbl_7732,status:12], valid-1 NODE_4939_length_1127_cov_31.3061 . gene 214 1061 . - . ID=g3741;Name=g3741.t1 NODE_4939_length_1127_cov_31.3061 . mRNA 214 1061 . - . ID=g3741.t1;Parent=g3741;Name=g3741.t1 NODE_4939_length_1127_cov_31.3061 . five_prime_UTR 1052 1061 . - . ID=g3741.t1.utr5p1;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . exon 941 1061 . - . ID=g3741.t1.exon1;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . CDS 941 1051 . - 0 ID=cds.g3741.t1;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . exon 400 737 . - . ID=g3741.t1.exon2;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . CDS 400 737 . - 0 ID=cds.g3741.t1;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . exon 214 306 . - . ID=g3741.t1.exon3;Parent=g3741.t1 NODE_4939_length_1127_cov_31.3061 . CDS 214 306 . - 1 ID=cds.g3741.t1;Parent=g3741.t1;3_prime_partial=true #PROT g3741.t1 g3741 MSQYRKLFGTCRIPKVGRDRLLTKADSKHIGVLRKGHFYFIPVATAEGSAIPEADISKQLKTILNERIEPPKHFIGVMTTADRDLWARWRPVLTGITSHSASSSATINNASLFELIDTSLFLVCLDEGTANESVDDTARRLLHGDGRNRWFDKSIQIIVADNGTAGVNFEHAWGDGHTVV # PASA_UPDATE: g12269.t1, single gene model update, valid-1, status:[pasa:asmbl_5986,status:3], valid-1 NODE_3393_length_3569_cov_38.7979 . gene 911 3379 . - . ID=g12269;Name=g12269.t1 NODE_3393_length_3569_cov_38.7979 . mRNA 911 3379 . - . ID=g12269.t1;Parent=g12269;Name=g12269.t1 NODE_3393_length_3569_cov_38.7979 . five_prime_UTR 3256 3379 . - . ID=g12269.t1.utr5p1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . five_prime_UTR 3067 3111 . - . ID=g12269.t1.utr5p2;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 3256 3379 . - . ID=g12269.t1.exon1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 3045 3111 . - . ID=g12269.t1.exon2;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 3045 3066 . - 0 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 2449 2933 . - . ID=g12269.t1.exon3;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 2449 2933 . - 2 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 2129 2210 . - . ID=g12269.t1.exon4;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 2129 2210 . - 0 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 1858 1989 . - . ID=g12269.t1.exon5;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 1858 1989 . - 2 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 1505 1579 . - . ID=g12269.t1.exon6;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 1505 1579 . - 2 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . exon 911 1380 . - . ID=g12269.t1.exon7;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . CDS 1379 1380 . - 2 ID=cds.g12269.t1;Parent=g12269.t1 NODE_3393_length_3569_cov_38.7979 . three_prime_UTR 911 1378 . - . ID=g12269.t1.utr3p1;Parent=g12269.t1 #PROT g12269.t1 g12269 MASKCILAAAVCIVALCSLADAFIPIGHRGNPSGAPENTMPGFIQAHKFGARGVETDLRLTKDGVIVLMHDETVDRTTNGTGYVSELTYEYISSLDAGSWYHPSFANTRVPTFLELLLYARDANLTIIMDLKNETIVYGKEIAALALPLSVQHLLTASCWSDIQALDIQEHLNVSVVQALRNNFQPASSVDDYFKKGYRSFSLAYFLTLPALIRAAHERGMTVYGWTVDDKIVMKLLIWLGYDGLLSNNVPLLVEAWQEVQNEGM* # ORIGINAL: g12268.t1 original gene structure, not modified by PASA NODE_3393_length_3569_cov_38.7979 AUGUSTUS gene 2 455 . + . ID=g12268;Name=g12268.t1 NODE_3393_length_3569_cov_38.7979 AUGUSTUS mRNA 2 455 . + . ID=g12268.t1;Parent=g12268;Name=g12268.t1 NODE_3393_length_3569_cov_38.7979 AUGUSTUS exon 2 178 . + . ID=g12268.t1.exon1;Parent=g12268.t1 NODE_3393_length_3569_cov_38.7979 AUGUSTUS CDS 2 178 . + 0 ID=cds.g12268.t1;Parent=g12268.t1 NODE_3393_length_3569_cov_38.7979 AUGUSTUS exon 390 455 . + . ID=g12268.t1.exon2;Parent=g12268.t1 NODE_3393_length_3569_cov_38.7979 AUGUSTUS CDS 390 455 . + 0 ID=cds.g12268.t1;Parent=g12268.t1 #PROT g12268.t1 g12268 LVGGWVSSCSNGYTEIVKLLIEAGANPSALSKAKDSALDIAPDSEIKDLINSAILARKLGAAYIQPQVDDDEEEEEEEDD* # ORIGINAL: g3357.t1 original gene structure, not modified by PASA NODE_1482_length_11026_cov_40.2232 AUGUSTUS gene 1878 5399 . + . ID=g3357;Name=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS mRNA 1878 5399 . + . ID=g3357.t1;Parent=g3357;Name=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 1878 1905 . + . ID=g3357.t1.exon1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 1878 1905 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 2072 2152 . + . ID=g3357.t1.exon2;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 2072 2152 . + 2 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 2406 2538 . + . ID=g3357.t1.exon3;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 2406 2538 . + 2 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 2858 3053 . + . ID=g3357.t1.exon4;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 2858 3053 . + 1 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 3224 3379 . + . ID=g3357.t1.exon5;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 3224 3379 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 3579 3621 . + . ID=g3357.t1.exon6;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 3579 3621 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 3860 3969 . + . ID=g3357.t1.exon7;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 3860 3969 . + 2 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 4219 4299 . + . ID=g3357.t1.exon8;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 4219 4299 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 4396 4539 . + . ID=g3357.t1.exon9;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 4396 4539 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 4905 5063 . + . ID=g3357.t1.exon10;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 4905 5063 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 5178 5399 . + . ID=g3357.t1.exon11;Parent=g3357.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 5178 5399 . + 0 ID=cds.g3357.t1;Parent=g3357.t1 #PROT g3357.t1 g3357 MAAIKVMDEDAEERKAKHVRFPVGALASLSAPWRTTGPASASDGDDIPPDFEFQMRHNLSCEWIGHEPTSVLAVIRLLADGTYGKVYRVAERTTKVRLAAKVLSMRDPVGVCLIDRLQADVQTLRECRHPNIVTLYGCIRTTESLWLLMEHCDAGSVEDIMRAIKKPFAERHIRAILAGATGGLAFLHARNLPHRDVKCGNFLVDLRGVVKIGDFGVALRQFQEKQARGSLLFMAPELLKEADVPHSAKTDVWSLGIAAIELLDGEPPYLGMRGDTVRSRIAKREPPKLSAAGQRKASWELRDFMGHCLRTDPADRLTTADLLKHPFFAAGRTDTQVLVKRIRKFMRVREAEEAEEDDEDGDGVEGLRRPAIADRMPVGLSEAILRPIDNAQGLDPEDTTDKYDRPWTATASGGSAKDGAHVLSAADEGSALLGGGFDDRGRCGQCCVVQ* # ORIGINAL: g3359.t1 original gene structure, not modified by PASA NODE_1482_length_11026_cov_40.2232 AUGUSTUS gene 8921 10664 . + . ID=g3359;Name=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS mRNA 8921 10664 . + . ID=g3359.t1;Parent=g3359;Name=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 8921 8945 . + . ID=g3359.t1.exon1;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 8921 8945 . + 0 ID=cds.g3359.t1;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 9207 9485 . + . ID=g3359.t1.exon2;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 9207 9485 . + 2 ID=cds.g3359.t1;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 9777 9975 . + . ID=g3359.t1.exon3;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 9777 9975 . + 2 ID=cds.g3359.t1;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 10236 10330 . + . ID=g3359.t1.exon4;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 10236 10330 . + 1 ID=cds.g3359.t1;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 10459 10664 . + . ID=g3359.t1.exon5;Parent=g3359.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 10459 10664 . + 2 ID=cds.g3359.t1;Parent=g3359.t1 #PROT g3359.t1 g3359 MSGAVYGGDEVGALVFDIGSHVTRAGYAGEDVPKAVFSSTVGVGAEASREGASDAVPMDVDGAPQTVPASTVGKKYYVGTAAGPSFTRHALEMKGVMEDGLVADWDIYEALVDHAYSSCLRADPSQHPLLISEPSWTTRAVRERMVEIAFERHKVPALFLAKSAVLTAFSMGRYAGLVVDSGASQTSVVPVYDGFMLHKGIRRSQLGGDFLASQHRLVLENELGIPVVPGYQIQSRETVAEGDPPQFTLRTLTPTQSFHNYAVRVGV* # ORIGINAL: g3356.t1 original gene structure, not modified by PASA NODE_1482_length_11026_cov_40.2232 AUGUSTUS gene 213 1496 . + . ID=g3356;Name=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS mRNA 213 1496 . + . ID=g3356.t1;Parent=g3356;Name=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 213 305 . + . ID=g3356.t1.exon1;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 213 305 . + 2 ID=cds.g3356.t1;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 446 779 . + . ID=g3356.t1.exon2;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 446 779 . + 2 ID=cds.g3356.t1;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 1054 1179 . + . ID=g3356.t1.exon3;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 1054 1179 . + 1 ID=cds.g3356.t1;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 1358 1496 . + . ID=g3356.t1.exon4;Parent=g3356.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 1358 1496 . + 1 ID=cds.g3356.t1;Parent=g3356.t1 #PROT g3356.t1 g3356 DVQKEADQNRPIPPYNEGATSPEEIYSLDSIIPPEEYDALKLPAKALSKASRDEIAAWRADGSLPEYVAARVAELPGGPQQRNRSARILLHLSYMLRFRGIADRRVGPRAVAEALGDAPEAVQAGLIGRFVEVSGGDGEKTTYRLPLRVKHKLVSYILALALILDGFTLDLALISKDLKMSATKATEHCRALGCVVRTKKLADGTQTKVATLGVPLTFPRPRGTKKGGA* # ORIGINAL: g3358.t1 original gene structure, not modified by PASA NODE_1482_length_11026_cov_40.2232 AUGUSTUS gene 5542 8245 . - . ID=g3358;Name=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS mRNA 5542 8245 . - . ID=g3358.t1;Parent=g3358;Name=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 7128 8245 . - . ID=g3358.t1.exon1;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 7128 8245 . - 0 ID=cds.g3358.t1;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 6323 6871 . - . ID=g3358.t1.exon2;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 6323 6871 . - 1 ID=cds.g3358.t1;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 5886 6176 . - . ID=g3358.t1.exon3;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 5886 6176 . - 1 ID=cds.g3358.t1;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS exon 5542 5656 . - . ID=g3358.t1.exon4;Parent=g3358.t1 NODE_1482_length_11026_cov_40.2232 AUGUSTUS CDS 5542 5656 . - 1 ID=cds.g3358.t1;Parent=g3358.t1 #PROT g3358.t1 g3358 MQSGSFRGLVDLVRRKARTDSPSSRPSSRAGDNAVPRPEALADVVRRAAARRREGGAAADCALVIVRTGGETDHGAEGPSSDGAEEESAPVVFQHGAGTPLSVAADVRGVYATLVDLVERLAGGGVADGAGAAHRAAAAAAPVTGGLSRAHSTAVLHRASGIAHMVAYVPVDGHLIVLAAPTGTLPTPCMCVCVERVASLLIVSFGSVRAALDVNHVLGAFVSSVLGEVFGDAGPRAQFTRLVGATPRLLPSPLARLQCQALLADLIAADRSRHVASLGNPRAVHPVGASCFHGGWMATACALNDAEARSVAAYCASAGILRDRFSELFVAWQALHEEPGAPRWACPRALLAMGLERTLLCVIVEGPPIECMRDNDMLVPDSLTVAECRACLQRIVDGPAVLFESDARGPAVPGLSLPDAFDTRRGGSAGVPAAQPGTASASAYGHGGVPSGLSPGMQSPALTRGGLKKRSSFSERLSNIVRRSASAGALSEAGGGVGGNSSMQSLHDASDAALSNASDADEGASMTSSPVHSRSITVGDVSLSDLRGATNAVFFDMTAGLHNVLFHYMSVDEERGIVVTPTLAQLGLEGGAASRLSKEVASCFAQACHALRAGLSRAPGDCELGVLLSTADPLGHDQPRKNTAEAFRYWAVGRKYVSPRRGQFYVCCHESAPQVAVELAFKLLFGTHGV* # ORIGINAL: g2828.t1 original gene structure, not modified by PASA NODE_13837_length_255_cov_63.1222_potentialcontaminant AUGUSTUS gene 2 255 . + . ID=g2828;Name=g2828.t1 NODE_13837_length_255_cov_63.1222_potentialcontaminant AUGUSTUS mRNA 2 255 . + . ID=g2828.t1;Parent=g2828;Name=g2828.t1 NODE_13837_length_255_cov_63.1222_potentialcontaminant AUGUSTUS exon 2 255 . + . ID=g2828.t1.exon1;Parent=g2828.t1 NODE_13837_length_255_cov_63.1222_potentialcontaminant AUGUSTUS CDS 2 255 . + 2 ID=cds.g2828.t1;Parent=g2828.t1 #PROT g2828.t1 g2828 KVARRDVKFADIAGQALANAQDDPIGVDKAVLSVWLPEGECTTVSREDFKHLKAAGISDERIDEIISAINEHGWRDGARLGMAF # PASA_UPDATE: g13349.t1, single gene model update, valid-1, status:[pasa:asmbl_2692,status:12], valid-1 NODE_1813_length_9122_cov_40.486 . gene 157 435 . + . ID=g13349;Name=g13349.t1 NODE_1813_length_9122_cov_40.486 . mRNA 157 435 . + . ID=g13349.t1;Parent=g13349;Name=g13349.t1 NODE_1813_length_9122_cov_40.486 . five_prime_UTR 157 158 . + . ID=g13349.t1.utr5p1;Parent=g13349.t1 NODE_1813_length_9122_cov_40.486 . exon 157 435 . + . ID=g13349.t1.exon1;Parent=g13349.t1 NODE_1813_length_9122_cov_40.486 . CDS 159 435 . + 0 ID=cds.g13349.t1;Parent=g13349.t1;5_prime_partial=true;3_prime_partial=true #PROT g13349.t1 g13349 VSAAHSDILLGPCGGREVAPFWTPHSLSGDGRARATGGRQWRDLGYGNGGVCEQRAIQSPPPCAHVTTLCPRALFTTLHMAACVCVCVCVFG # PASA_UPDATE: g13351.t1, single gene model update, valid-1, status:[pasa:asmbl_2694,status:3], valid-1 NODE_1813_length_9122_cov_40.486 . gene 3211 5023 . - . ID=g13351;Name=g13351.t1 NODE_1813_length_9122_cov_40.486 . mRNA 3211 5023 . - . ID=g13351.t1;Parent=g13351;Name=g13351.t1 NODE_1813_length_9122_cov_40.486 . five_prime_UTR 4965 5023 . - . ID=g13351.t1.utr5p1;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . exon 4790 5023 . - . ID=g13351.t1.exon1;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . CDS 4790 4964 . - 0 ID=cds.g13351.t1;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . exon 4092 4249 . - . ID=g13351.t1.exon2;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . CDS 4092 4249 . - 2 ID=cds.g13351.t1;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . exon 3211 3740 . - . ID=g13351.t1.exon3;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . CDS 3543 3740 . - 0 ID=cds.g13351.t1;Parent=g13351.t1 NODE_1813_length_9122_cov_40.486 . three_prime_UTR 3211 3542 . - . ID=g13351.t1.utr3p1;Parent=g13351.t1 #PROT g13351.t1 g13351 MARRYHDIEDEFEAPDHDDTPISRQPALRLSMSDGPGSELGTGSWRTGLFDVQGDLWTFLYSTACPCAVHGDNLQTLGGVNGDCECCSYCIAPCCVGAIGRERIRRAFRLSDDQNAGVFGSVLHKVFFCGGIGRLLENACLHTFCMPCSVAQEAREIQMRQSGSAERSYTVFPKKH* # PASA_UPDATE: g13352.t1, single gene model update, valid-1, status:[pasa:asmbl_2695,status:3], valid-1 NODE_1813_length_9122_cov_40.486 . gene 5499 8752 . + . ID=g13352;Name=g13352.t1 NODE_1813_length_9122_cov_40.486 . mRNA 5499 8752 . + . ID=g13352.t1;Parent=g13352;Name=g13352.t1 NODE_1813_length_9122_cov_40.486 . five_prime_UTR 5499 5596 . + . ID=g13352.t1.utr5p1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . exon 5499 6403 . + . ID=g13352.t1.exon1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . CDS 5597 6403 . + 0 ID=cds.g13352.t1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . exon 6761 6904 . + . ID=g13352.t1.exon2;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . CDS 6761 6904 . + 0 ID=cds.g13352.t1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . exon 7324 7479 . + . ID=g13352.t1.exon3;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . CDS 7324 7479 . + 0 ID=cds.g13352.t1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . exon 7700 7843 . + . ID=g13352.t1.exon4;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . CDS 7700 7843 . + 0 ID=cds.g13352.t1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . exon 8083 8752 . + . ID=g13352.t1.exon5;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . CDS 8083 8730 . + 0 ID=cds.g13352.t1;Parent=g13352.t1 NODE_1813_length_9122_cov_40.486 . three_prime_UTR 8731 8752 . + . ID=g13352.t1.utr3p1;Parent=g13352.t1 #PROT g13352.t1 g13352 MKKPGVSGFAIGHGPYLSMLLNAISQLIQAVGLLIFVFPVGIILFFTRHINDEAARWKAFSRRFNSDRARARKASTDATASSFSASAEITHALTTESEGGDSAKVGAPISDKASMGSDATSVAPSDDHVGLADVICALINAVGNLAVAIVQGSCGASVAIASTAISGLVAAVTSYFAFMRQIFGLLIDRVVNVVRASVDGYYSTMEAMWSNGLDSFRLLLKDYYSMFSALMSQLIDRVVGAVQESVDGYFRALHTMWPKILDTFRGMLQDYYGMFTSLFSQLIDKVVSAIQTSVQGYFKAIETIWPDMLNTFRGMLQDYYGMFTSLFSQLIDKVVTAIQTSVQGYFKAIETIWPDMLNTFRGMMQDYYKMFGGLMSELIERVVTAVQVSVAGYFHAIVTIWPLTLDALRSMLLDYYKFVESMVVPLINRTADTAESVSTKQAVAFETAWTSSCNAAVRISRDVLDFIKTLVVLSVTKVCFVTVHIATTALTTFSKVCVGTVSSVESVCKSATSDLGTASESCAKEVSSSASHIATASLDTTREVWTATLSAATASCGLLAIAVQVSLAPVAASLSVLIGALAALVAALATAIAHVSGGKGSLASAISAAVHQLAGAAMASAGKTQAKSVHEE* # ORIGINAL: g13350.t1 original gene structure, not modified by PASA NODE_1813_length_9122_cov_40.486 AUGUSTUS gene 1010 2267 . - . ID=g13350;Name=g13350.t1 NODE_1813_length_9122_cov_40.486 AUGUSTUS mRNA 1010 2267 . - . ID=g13350.t1;Parent=g13350;Name=g13350.t1 NODE_1813_length_9122_cov_40.486 AUGUSTUS exon 1510 2267 . - . ID=g13350.t1.exon1;Parent=g13350.t1 NODE_1813_length_9122_cov_40.486 AUGUSTUS CDS 1510 2267 . - 0 ID=cds.g13350.t1;Parent=g13350.t1 NODE_1813_length_9122_cov_40.486 AUGUSTUS exon 1010 1157 . - . ID=g13350.t1.exon2;Parent=g13350.t1 NODE_1813_length_9122_cov_40.486 AUGUSTUS CDS 1010 1157 . - 1 ID=cds.g13350.t1;Parent=g13350.t1 #PROT g13350.t1 g13350 MEDAHREAGDARGGGRGRGRGRGRGRGGLIQSRLMFQRTPSRIDNGDEGSCATDADNREEAGVAVLTGVTDVTLITKRAAACASSSPPTKSSACSPSNDSISDDVRLDGAAAVSVRVAKTAASSRGRIGRFPVHQRVGRGRGRGRGRGRGRPEMQCDNNDKKTDDHTMDDAGENANRLKDMSGADMGSGCVVGAAETHGDVACDGADGGSREEDEWCDTAGLDMPPRSTPAQKAERRRRRREQLRELKMREDREARESRLRKRRVDDDGDGATNCHNRALRATKSVSFAIPLELAVLPSTQ* # ORIGINAL: g13467.t1 original gene structure, not modified by PASA NODE_1481_length_11028_cov_39.5127 AUGUSTUS gene 1 1672 . - . ID=g13467;Name=g13467.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS mRNA 1 1672 . - . ID=g13467.t1;Parent=g13467;Name=g13467.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 1 1672 . - . ID=g13467.t1.exon1;Parent=g13467.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 1 1672 . - 0 ID=cds.g13467.t1;Parent=g13467.t1 #PROT g13467.t1 g13467 MCAIRSAIDTFKEQSLSVTANRRRKVTSSAFPPGVIDMEQSEDTPALHVTPLQRVIGRPTPDNLADRVRGLFDQLATSVKTAHESDVYSVLKDTTFPCDNVISSGSNQRADDAAAVAFSDVALQRGLSALLPGVTYPKIKGLPIAAYGNNAGEHFTLTAERMHLVLPTAMCNFLSTHMDDCEDSNRCKLGQHSTVAELTHSLVTGCPAGGKRLESESTNAVGPSSKPLSRMSAVWVSRFLITELKGGVLGLVIGDGTVESIVRALTDALARIFRSSLVTWTLSFRMERGALTIRREPGNPRRMFCHLQESDSMTAATFTSAGVHLSAQEARLADTLAFAVSAASSVVPARSRVVGESKVMLALSGLMRILKHNDVSHGLTVLPIVDGEPPVSYLTLTFECTSADKATEPLEARDWLQVRTSHVRSQPNLQDSIAVALLLHAYDNTVCVSSLRDHVSRLLDNLFNNTDGVREALETGLSSSAAVRESLMPRTVTEIHRIKSKGSNGQLAPRKVFLSGWWKYGRANIFGRMEKLSSDTASTGDGNHIIRSPNEASRHAI # PASA_UPDATE: g13469.t1, single gene model update, valid-1, status:[pasa:asmbl_1731,status:3], valid-1 NODE_1481_length_11028_cov_39.5127 . gene 7840 9878 . + . ID=g13469;Name=g13469.t1 NODE_1481_length_11028_cov_39.5127 . mRNA 7840 9878 . + . ID=g13469.t1;Parent=g13469;Name=g13469.t1 NODE_1481_length_11028_cov_39.5127 . five_prime_UTR 7840 8177 . + . ID=g13469.t1.utr5p1;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . exon 7840 9071 . + . ID=g13469.t1.exon1;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . CDS 8178 9071 . + 0 ID=cds.g13469.t1;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . exon 9161 9252 . + . ID=g13469.t1.exon2;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . CDS 9161 9252 . + 0 ID=cds.g13469.t1;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . exon 9350 9878 . + . ID=g13469.t1.exon3;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . CDS 9350 9467 . + 1 ID=cds.g13469.t1;Parent=g13469.t1 NODE_1481_length_11028_cov_39.5127 . three_prime_UTR 9468 9878 . + . ID=g13469.t1.utr3p1;Parent=g13469.t1 #PROT g13469.t1 g13469 MRRVRFLFQLKSRKEKKAAQERVLEREYTPKCWSRQFSHMGRRKTGPDGFTARLSGTDKEEEFAMIQVRWPVDIKVYAVDIKVYAAIEVYRQTDPNDKDTRALFAVFVVDGYRTGIASSTWPLYGEGDPDNSEFKKTYEEKHAVILLYETFLAGRAVLSVHNLNTSNVYSAIVTLKAKPLDVQYRQLSWVEAIPPHDKPLTRNERMVGPCLFRVQQIKRMAGSSCGAVIEHVEFVDAMRNGVVQLSARANLLASLCSRHSRKSAWRTLTTGRPRQRSLRCNHERMRPVYYNSEPAEMLATVSLQTWPISRSDGLPVSAAVRWNCKSCSRIIPGCRFGRHAQTSGFVRSEFVLSPFVRCRCCQHVVTG* # ORIGINAL: g13468.t1 original gene structure, not modified by PASA NODE_1481_length_11028_cov_39.5127 AUGUSTUS gene 1754 7324 . - . ID=g13468;Name=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS mRNA 1754 7324 . - . ID=g13468.t1;Parent=g13468;Name=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 5815 7324 . - . ID=g13468.t1.exon1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 5815 7324 . - 0 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 5456 5605 . - . ID=g13468.t1.exon2;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 5456 5605 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 4674 5222 . - . ID=g13468.t1.exon3;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 4674 5222 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 4174 4575 . - . ID=g13468.t1.exon4;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 4174 4575 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 3605 4014 . - . ID=g13468.t1.exon5;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 3605 4014 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 3046 3193 . - . ID=g13468.t1.exon6;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 3046 3193 . - 0 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 2279 2566 . - . ID=g13468.t1.exon7;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 2279 2566 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 1754 2016 . - . ID=g13468.t1.exon8;Parent=g13468.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 1754 2016 . - 2 ID=cds.g13468.t1;Parent=g13468.t1 #PROT g13468.t1 g13468 MGRLYVLSFAAFGLVWLIAMGTVLTASPPCDQTASVGCLSGACDKGLGMWNRSKTDRDCSASLSSSSLIVLGVGERKSVGVSFSISLPFALNPVSIPSSIVGAEKSAFQKPIESMIVSFSNAADVPCVRIYGLGPQDSSTFSLTFVGLCPTDGATVILRAVPNVAGLPVRHPLANITAAIRLYVIGNAAPFGCDLSKGDVHRTDKSALTCDICYAGFYGPACENELECQIDGATTQGLTRRPFADRRCRVTTSVAMSARVVTVNTPLVVNVTFGLPLTSSKSAVYVRLTPFVFRDSVIVLNASSVFVLQGNRTDGVDIVRPGRNSSFVMVSKFSVGTNISFVQAFEAVKVRVALTSADPLWNGSYVDFSINVKDCPLGWYGDQCQKSCDPIPDCSLVRCNYPRVPKCVVNTCAGGQFHDGIGCANCTKISNCIALMCSAWNASSCIRCSLGFYGSQCDKKCRAVANCQGMVTCSERSASVCSSCFEGFSGANCQPIDATPINGVYTCTIDGKVIKNGASVVDLKDVCTVTTCNNGTAVTTVNEPTTPAVNCQGVISASIVTFQGNGHLRYTSPKLRFDTNITLQMQTRATDGIVLAEIGRLPTDAIVIQLVAGKIDFRVNGGSGFISVATPVAINDGLWHTFEAFRDRTVVRLKVDGKLVAQKAMGSLTGIDSLQDVFLGGTTNASSVVAGGFLSMKWFVGSVRGFTYNTTDMLLTSSTLNTVNALWSCGMANQTSELTLEMTTMKARADYSFTRPVAVMSLLSFSFKPSALTTGPIFTLRDDNKAVVEFKANTSHVTATLDRQGKVLLLAYPTMIVVSEWHAVRLDMSSLSMLLSVDNGTARTAAVSPGYSFAPTTVVFGGFLGFSGFAGADVMAVTALFTEAQPLVPFGNGKVSVSLAVSNPTDNATISLQTMSGTAYAFDYFYPVLAKVALDGGKSIVNFLVDVNPLAITNDAYFVVDMFNPADDSRLSRPIHGSVSMPEIVYQLEPPLTAYLFAGSRCPFSNGMIRTQSYVAYACYGIDVIDTSEVDPVNSIVERRDFGCNCMLSSVRLLGKVPPTICELLLSTISTSRTVSEKKFKELAEACFARIGGGVSGTGGADQTGSAGSSSASDSLITTGHIDRDNSSGPSLLSSFIKDIISPQVSAVIKHIAYTEGILVTGSFGRVSPLALGRKYKYVGLGALPHCSIFNHPGLCGIGGKHARNEFFNTYDVDGGSNGSPLVHTPFTFAGHGNIRNMP* # ORIGINAL: g13470.t1 original gene structure, not modified by PASA NODE_1481_length_11028_cov_39.5127 AUGUSTUS gene 9903 10226 . - . ID=g13470;Name=g13470.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS mRNA 9903 10226 . - . ID=g13470.t1;Parent=g13470;Name=g13470.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS exon 9903 10226 . - . ID=g13470.t1.exon1;Parent=g13470.t1 NODE_1481_length_11028_cov_39.5127 AUGUSTUS CDS 9903 10226 . - 0 ID=cds.g13470.t1;Parent=g13470.t1 #PROT g13470.t1 g13470 MYECGLAYEAFHDKRAIIGAVDGLGDGAKSDKPITFSRTSVDNVLALMEDDNAVHMFDSLKEQFPIWFPIMADTITGIMADTNVKLFGTTNKHFIRVVQTVRDTCRD* # ORIGINAL: g8745.t1 original gene structure, not modified by PASA NODE_1906_length_8637_cov_39.0264 AUGUSTUS gene 4988 8535 . + . ID=g8745;Name=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS mRNA 4988 8535 . + . ID=g8745.t1;Parent=g8745;Name=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS exon 4988 5006 . + . ID=g8745.t1.exon1;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS CDS 4988 5006 . + 0 ID=cds.g8745.t1;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS exon 5140 5335 . + . ID=g8745.t1.exon2;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS CDS 5140 5335 . + 2 ID=cds.g8745.t1;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS exon 5498 7402 . + . ID=g8745.t1.exon3;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS CDS 5498 7402 . + 1 ID=cds.g8745.t1;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS exon 7759 7861 . + . ID=g8745.t1.exon4;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS CDS 7759 7861 . + 1 ID=cds.g8745.t1;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS exon 8098 8535 . + . ID=g8745.t1.exon5;Parent=g8745.t1 NODE_1906_length_8637_cov_39.0264 AUGUSTUS CDS 8098 8535 . + 0 ID=cds.g8745.t1;Parent=g8745.t1 #PROT g8745.t1 g8745 MEALSAEAAVRQLRSPVIPHSERLAVAVAVWRNDGIVIPRKDRFLLEWLSKELVGSTERGEAALDGAPQSHGLPALFNAGSWALFHDIITQVFGGGARSSSSATFTANSANIVVNPSILAPLAVAYVACLPRSAIVSSVDEVHRTDAKRRKNETTPSNDNDTLAAVDGPLLAAPLLACLRSLLGRTDVFVPTYEAFVSFVETMLHARLRGDHGARDSTGADSDDLFAVALNAFADVQRQHANRRKVFAVFTARLLTPLLVLRDGIVSQQSHQSASTAHSRVLTIVSALITNALFHKDHIAEYASALSAPAEFVHGVVKKGTPVGGDAAGDKKKPHAVVVSYPRQLFDHLRAELAPEGGVALAPTHGGKKEAAMHGRADAPVAARKRKADQMDSDGGASAVTSAAGVADVRRGGRIPGARDAVMRALPVLLEGFLAATQTEDSSGQKMAKSLSAGGAQEDTAAVDAEAASGDDDVVDAAADGKARVQQLHERARDAAEAARSFKRRVRFCVFLELCGMLGVDAPAVPLAEKVGALHALDTMLALLLSRGVYSVGDDNRDGQPQFRWFSSLLGGLLRNWQSDVPATPDADCLAAACRASDAVALQIDACVTHLLYLNHAIIEPHLVPLWRVVAAGCHPLPSPSPRTPGVLCERQCFRRTLSCVFATYVKLRRIDALCQSMLDAVVTCRASAEGAETLARLFGAVDFQREFADAVRRVPVGLLATVWGIFIQFLTPVSAHTNLVSAKPTKSPHKTKSTAAATGAGVDSALLPAARLFSLLATNSPLSDTTAPQFTTLVSQAREAVVEPLLRELRATEHSGVMAPPAVAVAEASLCLSAALISAQLLLSTLSRDAVGGVAAVGAWASLAAVAAGGSLATLLLSDARSAHSL # PASA_UPDATE: g8744.t1, single gene model update, valid-1, status:[pasa:asmbl_2979,status:12],[pasa:asmbl_2980,status:12], valid-1 NODE_1906_length_8637_cov_39.0264 . gene 266 4616 . - . ID=g8744;Name=g8744.t1 NODE_1906_length_8637_cov_39.0264 . mRNA 266 4616 . - . ID=g8744.t1;Parent=g8744;Name=g8744.t1 NODE_1906_length_8637_cov_39.0264 . five_prime_UTR 4504 4616 . - . ID=g8744.t1.utr5p1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 4501 4616 . - . ID=g8744.t1.exon1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 4501 4503 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 4255 4287 . - . ID=g8744.t1.exon2;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 4255 4287 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 3442 4068 . - . ID=g8744.t1.exon3;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 3442 4068 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 3187 3279 . - . ID=g8744.t1.exon4;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 3187 3279 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 2308 2901 . - . ID=g8744.t1.exon5;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 2308 2901 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 1693 1899 . - . ID=g8744.t1.exon6;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 1693 1899 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 1242 1358 . - . ID=g8744.t1.exon7;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 1242 1358 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 909 1055 . - . ID=g8744.t1.exon8;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 909 1055 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 679 780 . - . ID=g8744.t1.exon9;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 679 780 . - 0 ID=cds.g8744.t1;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . exon 266 520 . - . ID=g8744.t1.exon10;Parent=g8744.t1 NODE_1906_length_8637_cov_39.0264 . CDS 266 520 . - 0 ID=cds.g8744.t1;Parent=g8744.t1;3_prime_partial=true #PROT g8744.t1 g8744 MSGGFGQAGPYGPPQYGRPPFQPPPFGAPGGPPMPPMHAQMQPMHRPPPHGQLGGPVGGSAGPPFPGGPPQPYGAPGAQPPTPAPGAAGGAGGWTEHTGPGGRKYYYNAITRVSSWEKPPALMTKEELLLSRSSWQEFTSAEGRKYYYNTKTKTSVWDVPAELRELRESLAQAEAAAAASAASAPALEAVAAGVSVRVSAGDKAEAADASVSAADDASELQVPKDLSRDEMRQLFKSMLSEKGVGSDWSYEQAMKLVVADVRYGALKGFPDKRQVFTEYRSQKSRDEQNEKRTALRKARDELREYLESEEAALTPSVRYVELPAAVRRHPTFLAVEGDRDRREVFEEALVAIDRREKDKAREEKKRLAASVKEILRPHVTPRTTWHDVKRILAEDADVREHADVKALDSADQLGVFEEIVLELDAAVEAAREKERADTKREQRRNRANYLALLSDLRASGAITAASKWKELYPQLKSDERLVAMLGQPGSNPLDLFKLLVEELYSRFRDQRDALKAIARDLSFEVSTVTTFEEFAAAVSADARAHIVEPDNMRLSFAQLVERAQAREAEAQRDAERKAKKAARLFVAALRSAIVLPVEGVEGVTWAQVRPLVETTSAFADIASDAEREALFAQYLAEAKAEHAAMQNRASTADAEDGEIPGGDGSKEKASGRSKRHGSRSRSRSRSRDRSRRHRSRRSKSRSRSRSKSPSKKDGADKHSSSRKHKK # ORIGINAL: g3735.t1 original gene structure, not modified by PASA NODE_158_length_34140_cov_42.3402 AUGUSTUS gene 24773 25462 . + . ID=g3735;Name=g3735.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS mRNA 24773 25462 . + . ID=g3735.t1;Parent=g3735;Name=g3735.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 24773 25101 . + . ID=g3735.t1.exon1;Parent=g3735.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 24773 25101 . + 0 ID=cds.g3735.t1;Parent=g3735.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 25393 25462 . + . ID=g3735.t1.exon2;Parent=g3735.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 25393 25462 . + 1 ID=cds.g3735.t1;Parent=g3735.t1 #PROT g3735.t1 g3735 MSTPALGRAAVLVLTPFSFIHMSGVAVHGIDHDFYSKSKALHDKAVEMVRWKPKVHAGKGTEYFIFANKGMTDRWRHDKGISVLDVVQGFEIYHGTAKGEHNRPSTGELEDHFGTCNSEEVVRLILEHGVVH* # ORIGINAL: g3733.t1 original gene structure, not modified by PASA NODE_158_length_34140_cov_42.3402 AUGUSTUS gene 18425 20371 . + . ID=g3733;Name=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS mRNA 18425 20371 . + . ID=g3733.t1;Parent=g3733;Name=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 18425 18799 . + . ID=g3733.t1.exon1;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 18425 18799 . + 0 ID=cds.g3733.t1;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 18965 19141 . + . ID=g3733.t1.exon2;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 18965 19141 . + 0 ID=cds.g3733.t1;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 19371 19481 . + . ID=g3733.t1.exon3;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 19371 19481 . + 0 ID=cds.g3733.t1;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 19801 19965 . + . ID=g3733.t1.exon4;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 19801 19965 . + 0 ID=cds.g3733.t1;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 20252 20371 . + . ID=g3733.t1.exon5;Parent=g3733.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 20252 20371 . + 0 ID=cds.g3733.t1;Parent=g3733.t1 #PROT g3733.t1 g3733 MADSSAGDEPNPFSFRTFVQQGPPSTAPPASSFKAKGKKTPAVLNSNDDGFDDGFSDGADASSENPFSFKAFVKSDSAPLLHTLPPVEVDGDLPSVEAFAAPQSKRASVRTSSKTAPNLDTPFPEVADPELVRLEVDALRKKNKRSLKAIGDLEARLAFAEANTERIKSEAEEANARADAAERKVSSLERMIKTLRAKEVEDTAALDSMVHAIEKNLEITTVRALDAERTAAALRVERDALAQRAQAAEDAARDLASQCDASLNALREKSAYASAQLMKLSVDGDAAVKVLVRNVETMRLAADVLASMDRTETRS* # PASA_UPDATE: g3736.t1, single gene model update, valid-1, status:[pasa:asmbl_2057,status:3], valid-1 NODE_158_length_34140_cov_42.3402 . gene 25786 28614 . - . ID=g3736;Name=g3736.t1 NODE_158_length_34140_cov_42.3402 . mRNA 25786 28614 . - . ID=g3736.t1;Parent=g3736;Name=g3736.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 28535 28614 . - . ID=g3736.t1.utr5p1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 28365 28614 . - . ID=g3736.t1.exon1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 28365 28534 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 28063 28135 . - . ID=g3736.t1.exon2;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 28063 28135 . - 1 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 27617 27718 . - . ID=g3736.t1.exon3;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 27617 27718 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 27316 27414 . - . ID=g3736.t1.exon4;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 27316 27414 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 26909 27052 . - . ID=g3736.t1.exon5;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 26909 27052 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 26635 26667 . - . ID=g3736.t1.exon6;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 26635 26667 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . exon 25786 26382 . - . ID=g3736.t1.exon7;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . CDS 25975 26382 . - 0 ID=cds.g3736.t1;Parent=g3736.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 25786 25974 . - . ID=g3736.t1.utr3p1;Parent=g3736.t1 #PROT g3736.t1 g3736 MEGEHHNTNIMTMTRHIIEEQRKYPESTGDFTLLLAAIQLGCKYVSNCVRKAGLVNLTGEAGGSTNTTGDTQKKLDVLSNEVFINALASSGRVSIMVSEENEHAIFVKEKEGAGKNQHKYAVVFDPLDGSSNIDAGVSIGTIFGIYKLSATSTGTTLEDVLRPGREMVAAGYAMYGSSTVLVLSTGHEVHGYTLDPSLGEFVLTHENIRIPPKGKIYSVNEGNAQFWDKPTADFVEGMKRPKKGSPCSLRYIGSMVADVHRTLLYGGVFMYPGDSKAPNGKLRVLYECFPMAFLTEKAGGRASTGKGAILDHVPKGIHERCPVFLGSKEDVEEIERLYTLQA* # ORIGINAL: g3727.t1 original gene structure, not modified by PASA NODE_158_length_34140_cov_42.3402 AUGUSTUS gene 118 965 . - . ID=g3727;Name=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS mRNA 118 965 . - . ID=g3727.t1;Parent=g3727;Name=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 762 965 . - . ID=g3727.t1.exon1;Parent=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 762 965 . - 0 ID=cds.g3727.t1;Parent=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 426 593 . - . ID=g3727.t1.exon2;Parent=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 426 593 . - 0 ID=cds.g3727.t1;Parent=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 118 336 . - . ID=g3727.t1.exon3;Parent=g3727.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 118 336 . - 0 ID=cds.g3727.t1;Parent=g3727.t1 #PROT g3727.t1 g3727 MASSSGLPAVAAAAVLVTSTKMPDDTPQVRGYDFEDEEVDYRALLATFKNVGYQATNLGLAIDEVNKMLAWTLADEPVAPEEAEEDRDPAKRALVRCKIFLGYTSNLISSGVRENIRFLVKNKMVSVLVSTAGGIEEDFIKCLAPTYVGDFALRGADLRCKGLNRIGNLLVPNDNYCKFEDWVMPILDAMLEEQRTQ # PASA_UPDATE: g3730.t1, single gene model update, valid-1, status:[pasa:asmbl_2051,status:3], valid-1 NODE_158_length_34140_cov_42.3402 . gene 8141 9970 . + . ID=g3730;Name=g3730.t1 NODE_158_length_34140_cov_42.3402 . mRNA 8141 9970 . + . ID=g3730.t1;Parent=g3730;Name=g3730.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 8141 8319 . + . ID=g3730.t1.utr5p1;Parent=g3730.t1 NODE_158_length_34140_cov_42.3402 . exon 8141 9970 . + . ID=g3730.t1.exon1;Parent=g3730.t1 NODE_158_length_34140_cov_42.3402 . CDS 8320 9804 . + 0 ID=cds.g3730.t1;Parent=g3730.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 9805 9970 . + . ID=g3730.t1.utr3p1;Parent=g3730.t1 #PROT g3730.t1 g3730 MRAPAIRVFLVLVVVVGALVALTQATEAVARTQSPRVRREWRSLSASMRFRVAAALWTLKTTPTKEGRDKYGPHFNNYDELLMLHACAVYDPRCDVGHFGTSFMTFHRAFLLKMERALLSVDAGIGALPYWHAAFDAVNGTYRNNPDKYIFTCKYFGDWKTKAAEGYAVKNGLFADWPVAEFTSDKYGKSSWLAPANKCVREEWFSPLPCNSKNPKSTRYIRNHLDCTPTVARNENDVVLNQGAGLGGSTEIVYTDADFKACSSFDNVKSWMDWQNCVEMGVAACLPVTPAELATVVSTKVTFPPVFRNCTRHNLMGTYIDKNGKIQLVNFFHSMVHIKTGLDLADVTTSPNDPGPFTGHHANVDRNNMIWQKAAAKRESTYWNYPASRTSLQGAGRSNLTVSGPYAVHAASSCSNNSIYPEYHATDMWTRGTTLDEVVNRGFPFTNLFDCTADAVDKMGHRIRCTGEPGGYTHREILYWTAPGRTPYTYDVMS* # ORIGINAL: g3734.t1 original gene structure, not modified by PASA NODE_158_length_34140_cov_42.3402 AUGUSTUS gene 21149 22576 . - . ID=g3734;Name=g3734.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS mRNA 21149 22576 . - . ID=g3734.t1;Parent=g3734;Name=g3734.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS exon 21149 22576 . - . ID=g3734.t1.exon1;Parent=g3734.t1 NODE_158_length_34140_cov_42.3402 AUGUSTUS CDS 21149 22576 . - 0 ID=cds.g3734.t1;Parent=g3734.t1 #PROT g3734.t1 g3734 MARKRITQETFNAVVEENIAEFGMTREEAVEDAKLQFDSQGVDLSNVVATPDVSDDGTPGKHPIAAKIESIKAALDNTECQVADVIGLFKELLEVMATEPGHRIVAGTNDCVRLCIFASHRFLLHEEFVAVSLDILRECLQVQANRDLIGKDGIQMYALLIEAIKEDPTLLHRAFNALADACTGNEINRQRSVDSGVIDAAVAAIRGHGAHDELVESACRLLTSLTLSDDERALFCRSMEHVTTLVENGALETVIAALQANKARPNSRVSVELFSVLARLAVKDDFCKDIVARGGLDLVISTLESNVTVAALATEALNFIKCLAGNDDVKVTVGMGRGLDLMLAAFETHAKNPDVIENALGALGSVVLRQPAVVSNFYTKGGVPLIVTAMRIHADSARVQRVASMAVRNIVSRNPECRQPFLDEGIEPVLRAARKLPGCSDVGKAALRDLGCHVHLNEPFKGALKNNKEITQVFL* # PASA_UPDATE: g3728.t1, single gene model update, valid-1, status:[pasa:asmbl_2058,status:3], valid-1 NODE_158_length_34140_cov_42.3402 . gene 1340 4564 . + . ID=g3728;Name=g3728.t1 NODE_158_length_34140_cov_42.3402 . mRNA 1340 4564 . + . ID=g3728.t1;Parent=g3728;Name=g3728.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 1340 1449 . + . ID=g3728.t1.utr5p1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 1340 1452 . + . ID=g3728.t1.exon1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 1450 1452 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 1820 2023 . + . ID=g3728.t1.exon2;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 1820 2023 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 2187 2513 . + . ID=g3728.t1.exon3;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 2187 2513 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 2667 2927 . + . ID=g3728.t1.exon4;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 2667 2927 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 3199 3453 . + . ID=g3728.t1.exon5;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 3199 3453 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 3600 3731 . + . ID=g3728.t1.exon6;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 3600 3731 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 3898 4041 . + . ID=g3728.t1.exon7;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 3898 4041 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . exon 4250 4564 . + . ID=g3728.t1.exon8;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . CDS 4250 4399 . + 0 ID=cds.g3728.t1;Parent=g3728.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 4400 4564 . + . ID=g3728.t1.utr3p1;Parent=g3728.t1 #PROT g3728.t1 g3728 MPPKKSSGKGKRKKSGKSKSASSTREAPALVENANTSDMTKEQLEDLAKRIRVELEREREERNYFQLERDKISTFWEITKRGLEERKAEMRNKDREMEEMEERHQVEIKVYKQKVKHLLYEHQNNITELKTDGTMALKLEQDEYRKRETELRKDKRAFKLELKEYELSHEDIIKTLKQEHDKQVTTLRQDFERQSRELQLKYERKMKTMREELELRRKNEIHEIEERKNGQINTLMRNHEKAFGDIKNYYNDITLNNLALINSLRDQVEEMKKKEERNEKFMIEITNENKRLTDPLNRALAEVDDLRRQLANYDKDKTSLQSAKARLKVHEEEFKALKWEHEVLVQRFAQVEKERDDLYDRFVTTVYDVQQKTGFKNLLLEKKLGALSEQLEKKEAQLNEVLAASNLDPTALSAVTRKLDDVLDAKNEAIKDLQYELARVCKAHNDLIKTYESKLSEFGIPQEELGFKPLATKTGQSLGHGPAGLVATISQ* # PASA_UPDATE: g3731.t1, single gene model update, valid-1, status:[pasa:asmbl_2052,status:12], valid-1 NODE_158_length_34140_cov_42.3402 . gene 10092 12751 . - . ID=g3731;Name=g3731.t1 NODE_158_length_34140_cov_42.3402 . mRNA 10092 12751 . - . ID=g3731.t1;Parent=g3731;Name=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 12658 12751 . - . ID=g3731.t1.exon1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 12658 12751 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 12409 12521 . - . ID=g3731.t1.exon2;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 12409 12521 . - 2 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 11950 12276 . - . ID=g3731.t1.exon3;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 11950 12276 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 11563 11763 . - . ID=g3731.t1.exon4;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 11563 11763 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 11125 11313 . - . ID=g3731.t1.exon5;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 11125 11313 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 10900 10959 . - . ID=g3731.t1.exon6;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 10900 10959 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . exon 10092 10701 . - . ID=g3731.t1.exon7;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . CDS 10198 10701 . - 0 ID=cds.g3731.t1;Parent=g3731.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 10092 10197 . - . ID=g3731.t1.utr3p1;Parent=g3731.t1 #PROT g3731.t1 g3731 MDSLGVGDYDDGRASNRSTLGSQPSTPTTTAASAASLGDSPPEQASDGSRGSSVSSVQDEYDDAIRYAQIRPFLRSLLKGDAGEDDVVATPRASEPAKVAAAAPRSPAGSRPRSAEPSVRKVHGYGPAAATSGMATTTTTTTTTTLEEEVEVSALDDDISKLEGELDTWCGTLKKAVLAEFSHTKVRLLQRNLRRIEEERRSCNARLATLQAECASLREHAHASGQSLKSRELVMERLLALMKAQRDSGTARAAFDRWRQQHTEAQREGYAARLADQHHRRAVLRRAFEGWHGVIKAGWRERAERACQARAEEVCRVLTIDYEEKLAVLRSQLDSAREEIGVLHRQQEEYNEKMKKAFMRGVCALNMEAMSMFRGGAPQELPAESAPMHSGPAHALDAEAAYHRKHAQQQQHQQHQQHQQQRTVSAVSYSSSSRVPHSRDEVHSHATTAASSRVVIERHGTHRNAGHVLSGGDDDVVPRRSQPAPLIQKGTQVVI* # PASA_UPDATE: g3738.t1, single gene model update, valid-1, status:[pasa:asmbl_2060,status:12], valid-1 NODE_158_length_34140_cov_42.3402 . gene 31870 33894 . + . ID=g3738;Name=g3738.t1 NODE_158_length_34140_cov_42.3402 . mRNA 31870 33894 . + . ID=g3738.t1;Parent=g3738;Name=g3738.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 31870 31990 . + . ID=g3738.t1.utr5p1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 31870 32131 . + . ID=g3738.t1.exon1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 31991 32131 . + 0 ID=cds.g3738.t1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 32341 32386 . + . ID=g3738.t1.exon2;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 32341 32386 . + 0 ID=cds.g3738.t1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 32683 32869 . + . ID=g3738.t1.exon3;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 32683 32869 . + 2 ID=cds.g3738.t1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 33249 33307 . + . ID=g3738.t1.exon4;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 33249 33307 . + 1 ID=cds.g3738.t1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 33667 33792 . + . ID=g3738.t1.exon5;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 33667 33792 . + 2 ID=cds.g3738.t1;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . exon 33881 33894 . + . ID=g3738.t1.exon6;Parent=g3738.t1 NODE_158_length_34140_cov_42.3402 . CDS 33881 33894 . + 2 ID=cds.g3738.t1;Parent=g3738.t1 #PROT g3738.t1 g3738 MTAGMRSLCMLLVCVAVSSLFGVTRADNVMWGPRPSIIELTADNFDEVVNGGKSVFVKFYKQSNTDCERFIGEFDLVANSYAKAGQAVTVARVDGGRNSELIRRIGVRSFPSFLLFPRGKPDVQRLPESAVTAEAIVEWIGSVLGTSGSVSVQRPPPALVELTPANFAQIARSEKDRGAFVEFYAPFGML* # PASA_UPDATE: g3732.t1, single gene model update, valid-1, status:[pasa:asmbl_2053,status:12], valid-1 NODE_158_length_34140_cov_42.3402 . gene 13328 17656 . + . ID=g3732;Name=g3732.t1 NODE_158_length_34140_cov_42.3402 . mRNA 13328 17656 . + . ID=g3732.t1;Parent=g3732;Name=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 13328 13780 . + . ID=g3732.t1.exon1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 13328 13780 . + 0 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 13945 14220 . + . ID=g3732.t1.exon2;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 13945 14220 . + 0 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 14447 14610 . + . ID=g3732.t1.exon3;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 14447 14610 . + 0 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 14920 15007 . + . ID=g3732.t1.exon4;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 14920 15007 . + 1 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 15280 15578 . + . ID=g3732.t1.exon5;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 15280 15578 . + 0 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 15769 16247 . + . ID=g3732.t1.exon6;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 15769 16247 . + 1 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . exon 16747 17656 . + . ID=g3732.t1.exon7;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . CDS 16747 17555 . + 2 ID=cds.g3732.t1;Parent=g3732.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 17556 17656 . + . ID=g3732.t1.utr3p1;Parent=g3732.t1 #PROT g3732.t1 g3732 MDEEAAIDERTALLSADYAVRDARDSPLNGNGLRAVPGDAATPDGLGGGAYYWRGSSYDRDGSDGCMSAGSVPVSPSSTSEGKTHHEHHRHSSMSAMPEAKGAVGGSGWRAWLEGSLSWRTVKYARPDYKYFAPAMLLLFVEAAAAMFIPKYVEEMVDIASGTLKYKERDAQENEIRNLLSVLLLIVFGQSTAMFLKTLFFRFGGARLVQRLRGAIHRSILRDHAFEFIDRFSANELVSYLGQVDAMETMLNDRAEMLQNVVFVLMGVGFFFWTNADLGPILMATVAFLVFITFPYNAVVRWNTARLMRREAELADYAQSSILRIRQVRNLATEDIETRNFAKLCREIYLVDRLSAKVAAAYDFLISMSAGTGFAVAMWLASRDVIDRDLSRGKLLAFFMYADIVFENLQMLFEKMEAYSASTSAARLLFDLIGTKFTADDDVAAKTAARKLQRESSSRASTQPAQGQLHPRPSASQLRRQSMQNSSINRNAQLESVVGGGDDNDTSEREARDKESAGGAVARAGSAHAHAHAYAHAHAEGASGVLLRFVGVDCRHPTKWGKGGIRSFSMDVACGDIVYVYGPADLACGFYTPDRGTVRLFSGDVEAAPSSPAVRRAKQHDQPASNPGGDESLSLAWLSADDDIFPGSVFENIAANSEGNPTMQAVHAAAAEAGVHDAIIRLPHGYDTRVTSHFRAASGDAAPGLRGARKHPRNLRPIVLPGHVARRIAVARAFLRRPQLVLADAAFLTCDQEDAEGLFSAVVRLLGRNRRIASAGGSGVGVAVRASAGLLVVGEHIDENITACANRIIVFGFGGHVCEEGTHEALMARTGETAVYARMLARRKAQGRWLDYSEH* # PASA_UPDATE: g3729.t1, single gene model update, valid-1, status:[pasa:asmbl_2056,status:12], valid-1 NODE_158_length_34140_cov_42.3402 . gene 4651 6548 . - . ID=g3729;Name=g3729.t1 NODE_158_length_34140_cov_42.3402 . mRNA 4651 6548 . - . ID=g3729.t1;Parent=g3729;Name=g3729.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 6380 6548 . - . ID=g3729.t1.utr5p1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 6246 6548 . - . ID=g3729.t1.exon1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 6246 6379 . - 0 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 5939 6039 . - . ID=g3729.t1.exon2;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 5939 6039 . - 1 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 5638 5757 . - . ID=g3729.t1.exon3;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 5638 5757 . - 2 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 5291 5420 . - . ID=g3729.t1.exon4;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 5291 5420 . - 2 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 4927 5055 . - . ID=g3729.t1.exon5;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 4927 5055 . - 1 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . exon 4651 4783 . - . ID=g3729.t1.exon6;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . CDS 4693 4783 . - 1 ID=cds.g3729.t1;Parent=g3729.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 4651 4692 . - . ID=g3729.t1.utr3p1;Parent=g3729.t1 #PROT g3729.t1 g3729 MDVKSVVDAFGNLPPLLMPGQIALRAFGIGVACGMGLVIAATHPLHWAFGAYVAFLAFFHWSEYMTTALFNQHKLSLESFLLNHSTEYKAAAAFCWAEYIVEAVFFPSLKGHHWISFVGLLIVIMGEFVRKLAMFTARSNFSHIIAEDKKRDHQLVTVGIYSVLRHPSYFGWFWWSIGTQILLCNPVSLVGFALASWRFFRDRIEYEEETLVSFFGPDYEDYRRRVGTGIPLIR* # PASA_UPDATE: g3737.t1, single gene model update, valid-1, status:[pasa:asmbl_2059,status:3], valid-1 NODE_158_length_34140_cov_42.3402 . gene 29149 31611 . + . ID=g3737;Name=g3737.t1 NODE_158_length_34140_cov_42.3402 . mRNA 29149 31611 . + . ID=g3737.t1;Parent=g3737;Name=g3737.t1 NODE_158_length_34140_cov_42.3402 . five_prime_UTR 29149 29226 . + . ID=g3737.t1.utr5p1;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . exon 29149 29904 . + . ID=g3737.t1.exon1;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . CDS 29227 29904 . + 0 ID=cds.g3737.t1;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . exon 30046 30131 . + . ID=g3737.t1.exon2;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . CDS 30046 30131 . + 0 ID=cds.g3737.t1;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . exon 30418 31611 . + . ID=g3737.t1.exon3;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . CDS 30418 31423 . + 1 ID=cds.g3737.t1;Parent=g3737.t1 NODE_158_length_34140_cov_42.3402 . three_prime_UTR 31424 31611 . + . ID=g3737.t1.utr3p1;Parent=g3737.t1 #PROT g3737.t1 g3737 MLRMLSALTAARALTRAQCTVSRCGRPFATAAGIDSRFGQSLETHRVENQPPPLENYNAFDNDVLLRQILRQEGADWAIESVRDLGRIVGSDKIIEMGTAVNKHGPVLKTHDRYGNRIDEVDFHPSYHALQSMAVSHGVHSYAWNNEDKPGAHVARAMKLFLFSQAESGIGCPLSMTYAAVPAIRNEPSVAMEWEKRFTSTEYDARVAPAKLKTGSQCGMAMTEKQGGSDVRANTTTATPLPGSTKNEYTLLGHKWFCSAPMCDAFLTLAKIPGTNAPTCFIVPRWRPDDTRNAMNIMRLKDKLGNKSNASSEIEYRNAYAVRVGPEGRGIPTIIDMVMHTRLDCCIGASALMRVSLLHAIHHTSNRKAFGKVIRQQPLMANVLADLAVESEAATLMTMRLARSFGMGQSEGERAFSRIATAVSKYWICKRVVGHVHEAMECHGGNGYVEDGVLARAFREAPLNGIWEGSGNVITLDVLRAMKTEPESVGAFFSELSHCRGADKRLDAAVDALKETVSRPFEEIASRRVVEQMALCLQGSLLAQNSPKEVLNAFLSSRLGDGGYVYGTLSADAARGAQKIIDRAVGWTA* # ORIGINAL: g10672.t1 original gene structure, not modified by PASA NODE_5825_length_706_cov_26.6292 AUGUSTUS gene 230 691 . - . ID=g10672;Name=g10672.t1 NODE_5825_length_706_cov_26.6292 AUGUSTUS mRNA 230 691 . - . ID=g10672.t1;Parent=g10672;Name=g10672.t1 NODE_5825_length_706_cov_26.6292 AUGUSTUS exon 230 691 . - . ID=g10672.t1.exon1;Parent=g10672.t1 NODE_5825_length_706_cov_26.6292 AUGUSTUS CDS 230 691 . - 0 ID=cds.g10672.t1;Parent=g10672.t1 #PROT g10672.t1 g10672 MKIPIQDWAGQQGLPEILETSFQKIVKVPASAFQEQVRIMLNITATKVEFQCTDDQLVLACNGEVIAQDSVFEDDTTIITNSTEDEDDPPIVQGVFPLKTLAICSKCSSMCPQVTIFLRNDMPMMLEYNVGALGTLRFIITPYTEPVAEPAAT* # ORIGINAL: g12149.t1 original gene structure, not modified by PASA NODE_3739_length_2861_cov_37.0302 AUGUSTUS gene 71 2319 . + . ID=g12149;Name=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS mRNA 71 2319 . + . ID=g12149.t1;Parent=g12149;Name=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 71 132 . + . ID=g12149.t1.exon1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 71 132 . + 2 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 323 397 . + . ID=g12149.t1.exon2;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 323 397 . + 0 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 574 690 . + . ID=g12149.t1.exon3;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 574 690 . + 0 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 1005 1119 . + . ID=g12149.t1.exon4;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 1005 1119 . + 0 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 1256 1311 . + . ID=g12149.t1.exon5;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 1256 1311 . + 2 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 1429 1518 . + . ID=g12149.t1.exon6;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 1429 1518 . + 0 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 1792 2027 . + . ID=g12149.t1.exon7;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 1792 2027 . + 0 ID=cds.g12149.t1;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS exon 2250 2319 . + . ID=g12149.t1.exon8;Parent=g12149.t1 NODE_3739_length_2861_cov_37.0302 AUGUSTUS CDS 2250 2319 . + 1 ID=cds.g12149.t1;Parent=g12149.t1 #PROT g12149.t1 g12149 ERLDLLQAFFDDTNMRQSMREEHLRRIPDLHRILRKFHRGKATLEDCVRLYQVALRVPLMRDVICGHDGAFKSLLDDMFARPLEELNIEFSKYRNLIETTVDLERVDSHEFVIRPTFDERLQQLHNAREAVLAKIQLQLNVAARDLGLEPNKVLKLESSPQHGYFFRVTRKEEKVVRNSSKYVTIDTQKSGVRFTSGALRQLNDEQSELMTKYNSVQSTLAAEVIRVATGYAEPMERTNDLVAMMDVVASLADASARAPIPYVRPTIHPMGE* # PASA_UPDATE: g13621.t1, single gene model update, valid-1, status:[pasa:asmbl_4298,status:12], valid-1 NODE_242_length_29594_cov_40.9362 . gene 372 917 . + . ID=g13621;Name=g13621.t1 NODE_242_length_29594_cov_40.9362 . mRNA 372 917 . + . ID=g13621.t1;Parent=g13621;Name=g13621.t1 NODE_242_length_29594_cov_40.9362 . five_prime_UTR 372 372 . + . ID=g13621.t1.utr5p1;Parent=g13621.t1 NODE_242_length_29594_cov_40.9362 . exon 372 520 . + . ID=g13621.t1.exon1;Parent=g13621.t1 NODE_242_length_29594_cov_40.9362 . CDS 373 520 . + 0 ID=cds.g13621.t1;Parent=g13621.t1;5_prime_partial=true NODE_242_length_29594_cov_40.9362 . exon 777 917 . + . ID=g13621.t1.exon2;Parent=g13621.t1 NODE_242_length_29594_cov_40.9362 . CDS 777 859 . + 2 ID=cds.g13621.t1;Parent=g13621.t1 NODE_242_length_29594_cov_40.9362 . three_prime_UTR 860 917 . + . ID=g13621.t1.utr3p1;Parent=g13621.t1 #PROT g13621.t1 g13621 EAAAALVRERANLGQEINMDSAWVKAYYKQRRTTNFLISSFLFAFCAGVYVYTLRSVKHEDFSDEDEIAAQTAAKK* # PASA_UPDATE: g13624.t1, single gene model update, valid-1, status:[pasa:asmbl_4296,status:3], valid-1 # PASA_UPDATE: g13624.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4297,status:3], valid-1 NODE_242_length_29594_cov_40.9362 . gene 23864 27762 . - . ID=g13624;Name=g13624.t1 NODE_242_length_29594_cov_40.9362 . mRNA 23864 27762 . - . ID=g13624.t1;Parent=g13624;Name=g13624.t1 NODE_242_length_29594_cov_40.9362 . five_prime_UTR 27568 27762 . - . ID=g13624.t1.utr5p1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 27480 27762 . - . ID=g13624.t1.exon1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 27480 27567 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 26937 27157 . - . ID=g13624.t1.exon2;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 26937 27157 . - 2 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 26709 26798 . - . ID=g13624.t1.exon3;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 26709 26798 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 26266 26373 . - . ID=g13624.t1.exon4;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 26266 26373 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 25799 25907 . - . ID=g13624.t1.exon5;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 25799 25907 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 25355 25518 . - . ID=g13624.t1.exon6;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 25355 25518 . - 2 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 25027 25114 . - . ID=g13624.t1.exon7;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 25027 25114 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 24652 24791 . - . ID=g13624.t1.exon8;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 24652 24791 . - 2 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 24259 24405 . - . ID=g13624.t1.exon9;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 24259 24405 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . exon 23864 23999 . - . ID=g13624.t1.exon10;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . CDS 23907 23999 . - 0 ID=cds.g13624.t1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . three_prime_UTR 23864 23906 . - . ID=g13624.t1.utr3p1;Parent=g13624.t1 NODE_242_length_29594_cov_40.9362 . mRNA 23864 27762 . - . ID=g13624.t1.1.5b6be70b;Parent=g13624;Name=g13624.t1 NODE_242_length_29594_cov_40.9362 . five_prime_UTR 27216 27762 . - . ID=g13624.t1.1.5b6be70b.utr5p1;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 26937 27762 . - . ID=g13624.t1.1.5b6be70b.exon1;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 26937 27215 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 26709 26798 . - . ID=g13624.t1.1.5b6be70b.exon2;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 26709 26798 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 26266 26373 . - . ID=g13624.t1.1.5b6be70b.exon3;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 26266 26373 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 25799 25907 . - . ID=g13624.t1.1.5b6be70b.exon4;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 25799 25907 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 25355 25518 . - . ID=g13624.t1.1.5b6be70b.exon5;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 25355 25518 . - 2 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 25027 25114 . - . ID=g13624.t1.1.5b6be70b.exon6;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 25027 25114 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 24652 24791 . - . ID=g13624.t1.1.5b6be70b.exon7;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 24652 24791 . - 2 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 24259 24405 . - . ID=g13624.t1.1.5b6be70b.exon8;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 24259 24405 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . exon 23864 23999 . - . ID=g13624.t1.1.5b6be70b.exon9;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . CDS 23907 23999 . - 0 ID=cds.g13624.t1.1.5b6be70b;Parent=g13624.t1.1.5b6be70b NODE_242_length_29594_cov_40.9362 . three_prime_UTR 23864 23906 . - . ID=g13624.t1.1.5b6be70b.utr3p1;Parent=g13624.t1.1.5b6be70b #PROT g13624.t1 g13624 MDTHAKFAQLATLFPTINAATIRSTLEACGNDVNAAADRLLSGDVPIQAATQAMQGLQLQAPHSSAKASAPMPYAHAPAARPHHGHPHPPHTAGLPYVPPTHQTAPLPYMRVARAGPGGATLVGASLLDHQKEEFYRNGFVFVPGVIPIELVNAALRAINHSLGEGINKADWHLNSDRDPPTVAYCKDAANSPQVKALLADTDLWGLCESLIGPGRINGRGHGAQIALRFPQNSPNYGPHWEQHWHVDGIPTPDNGLVPKDRVHSFSLLVGVYLSPIDFPCSGNLCVFPGSHHMMEKFCRDFGPETMVDHGLPKLPVPPPCHVLAGPGDVVLAHYSLAHTVAPNASPHVRYACYFRLSNARRNTPEGRSGYESMTDIWLEFEGMREVVSAMQATGPPPEHSMQYVPYDAKKLAKK* #PROT g13624.t1.1.5b6be70b g13624 MRMFVETDDSNTVVRRICAGNDVNAAADRLLSGDVPIQAATQAMQGLQLQAPHSSAKASAPMPYAHAPAARPHHGHPHPPHTAGLPYVPPTHQTAPLPYMRVARAGPGGATLVGASLLDHQKEEFYRNGFVFVPGVIPIELVNAALRAINHSLGEGINKADWHLNSDRDPPTVAYCKDAANSPQVKALLADTDLWGLCESLIGPGRINGRGHGAQIALRFPQNSPNYGPHWEQHWHVDGIPTPDNGLVPKDRVHSFSLLVGVYLSPIDFPCSGNLCVFPGSHHMMEKFCRDFGPETMVDHGLPKLPVPPPCHVLAGPGDVVLAHYSLAHTVAPNASPHVRYACYFRLSNARRNTPEGRSGYESMTDIWLEFEGMREVVSAMQATGPPPEHSMQYVPYDAKKLAKK* # PASA_UPDATE: g13623.t1, single gene model update, valid-1, status:[pasa:asmbl_4299,status:12], valid-1 NODE_242_length_29594_cov_40.9362 . gene 22120 23824 . + . ID=g13623;Name=g13623.t1 NODE_242_length_29594_cov_40.9362 . mRNA 22120 23824 . + . ID=g13623.t1;Parent=g13623;Name=g13623.t1 NODE_242_length_29594_cov_40.9362 . five_prime_UTR 22120 22175 . + . ID=g13623.t1.utr5p1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 22120 22310 . + . ID=g13623.t1.exon1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 22176 22310 . + 0 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 22404 22505 . + . ID=g13623.t1.exon2;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 22404 22505 . + 0 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 22688 22765 . + . ID=g13623.t1.exon3;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 22688 22765 . + 0 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 23019 23114 . + . ID=g13623.t1.exon4;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 23019 23114 . + 0 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 23314 23425 . + . ID=g13623.t1.exon5;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 23314 23425 . + 0 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . exon 23712 23824 . + . ID=g13623.t1.exon6;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . CDS 23712 23812 . + 2 ID=cds.g13623.t1;Parent=g13623.t1 NODE_242_length_29594_cov_40.9362 . three_prime_UTR 23813 23824 . + . ID=g13623.t1.utr3p1;Parent=g13623.t1 #PROT g13623.t1 g13623 MATGATIEAAGLDLILGSSSRWRKIVLERSDLGPFKVLTADIDEKAITAGFSDRNTADPEKLTLAIASAKAEAILPKVTSPTILVTSDQIVVYEGKVREKPESAEECYRYLKSYETKPAETCTAVVVINTKNNKRTSGIDRAKQHFSPIPEPIATELIAKGDVMHCCGGFMIDDPILHPYLTHREGTEDSIMGLPIALLKDLISSVL* # PASA_UPDATE: g13622.t1, single gene model update, valid-1, status:[pasa:asmbl_4292,status:12],[pasa:asmbl_4293,status:12],[pasa:asmbl_4294,status:12],[pasa:asmbl_4295,status:12], valid-1 NODE_242_length_29594_cov_40.9362 . gene 1039 21252 . - . ID=g13622;Name=g13622.t1 NODE_242_length_29594_cov_40.9362 . mRNA 1039 21252 . - . ID=g13622.t1;Parent=g13622;Name=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 20688 21252 . - . ID=g13622.t1.exon1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 20688 21252 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 20165 20268 . - . ID=g13622.t1.exon2;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 20165 20268 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 17994 19793 . - . ID=g13622.t1.exon3;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 17994 19793 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 17326 17736 . - . ID=g13622.t1.exon4;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 17326 17736 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 16704 17070 . - . ID=g13622.t1.exon5;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 16704 17070 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 16335 16436 . - . ID=g13622.t1.exon6;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 16335 16436 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 15841 15959 . - . ID=g13622.t1.exon7;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 15841 15959 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 15572 15634 . - . ID=g13622.t1.exon8;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 15572 15634 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 14466 15284 . - . ID=g13622.t1.exon9;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 14466 15284 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 13503 13950 . - . ID=g13622.t1.exon10;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 13503 13950 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 13018 13154 . - . ID=g13622.t1.exon11;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 13018 13154 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 12673 12827 . - . ID=g13622.t1.exon12;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 12673 12827 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 3341 12543 . - . ID=g13622.t1.exon13;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 3341 12543 . - 1 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 2769 3095 . - . ID=g13622.t1.exon14;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 2769 3095 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 1988 2511 . - . ID=g13622.t1.exon15;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 1988 2511 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 1628 1745 . - . ID=g13622.t1.exon16;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 1628 1745 . - 0 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . exon 1039 1521 . - . ID=g13622.t1.exon17;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . CDS 1430 1521 . - 2 ID=cds.g13622.t1;Parent=g13622.t1 NODE_242_length_29594_cov_40.9362 . three_prime_UTR 1039 1429 . - . ID=g13622.t1.utr3p1;Parent=g13622.t1 #PROT g13622.t1 g13622 MAANRSWQQHAAPSSHTKVRLVLIFAAIFLASCATRTDAAFQFGRDHHFAYDSIVMTSGEVGGPISGVGSGYPLRVKAELVVRPIEEDIGFQLCRVEFTRVFFFREKAKDAFVMVPSDYDFSQYFAFRQLDSGEIVEVNYPKSDRLGTINLKKGMLSSLSSRIHDDMLRSRRGVETEWHWQANETSHGGEHKSEYSARLVNTFFHVSKKSNTSDEHGLRSEKKVIIVDAESMVFRHVSIEESMFAHAKKTPAEFASEGLQGAFGKAVPAEQRARRADDKHPEAPKIDHEMPSWKFNGRASTNMTLVRTAESPDVVHEKPHDMESDTLLVRVQEVRVDPRWLSQATQHLECFNQNPTTGTAARATCFSSLLNVLSTISDRNMTMFARRFLVDQADPVHALVVIDALASIGSVAAQEAIVRFVLLHPDRPLGEVHQAILAIHHVTNPSPLLVDTIEKMCFAASDLVGVKYDLSYFSETRRMVMLAFGSIVLNLKKSDPQAAEELIALVHAELDDHHTGMRRRGIGLQDETGSVHDYVRHLSILVDTLGNAGMPSSLDRLFVHVDSEQTFLRASALHSLRHYPTEAAIEDVLLRGMNDTDRSVRACAGNSFVLQPRYSDHPPPPTNPDDLFEGLPDEHPASRARRLTLGQIFDWSWSIELRAPGFFWQTGFGNDQIGAFAKAEERNGVTIYLSILKSFLDFDIYNEAAAYINAFGKRIYVFQVLFAYVCKWGYDFEIIRKFNIDDIASIGDVFNKIKGWIEAKIREVYDLIKLAIEKFKDVAISVIDAIKAIPDAIVGLFNKIVNIITGKGTTTDQSKRDEEALIKTLVDLTKQFIEDLLGMSLDFIWKSVERDISLLGITGDNGVKKIIFGITNIAECPLYAVLAIIEGADDIRQAIFSTNVTLGWGLIPLGKKMIVELGLLDGGIPPWLTQIPPEAYVMKDEFLKYLKKCAEAAKNASIVSDCSFQKPMASMFDAVEKIESTKQWVMNVTSFYMEQYENVTAKYTLLKSKFEEVRKFFDNIFGTKFHSDFPRDPWSGDDCGKGVFIADAKEPGIDLKVATDAKSIVFPFKGTLSERRGSGITFVGEGALKGFDIIMNDFTPGGDLTVGMRVVAGAVAGKPKLRSCSSDPILHIKIKRSEPEEGEPNYIDPSKYLKRRVNIGLTKDEKANRIKFIFALQTKLDRPVLATDGAWKKGQDGASNSAEKPPGGASAPPKPTRRDVSPVTSLVDDASAPLHRDRRALTCDDFTPTKDVCMSFEKRNLLVLSIPIKGFEFSYSLGPVTLTAKFGAFLDFGLDLTMTLCLMSKSLTATVTPHVGVSITASATIDIGIASAGVTITGVLMEIGLPIHAIVKFTGFPLDICIQLDLYIIPIKFTFYGRLSVCFLVCGTIFDEPIFEWSATPIRFDKFFDNCKPKPDKTPPEWIKLPTAWQEFWDPIDDPFLLGEWEADDKDTGIDKVEWGGGSTPGATDIFAFERIEGNRMRSRIPNIPEGTLYVTFRATNKQGLTSSKTVDPISWDLTVPDIEVYDGNATNYYLTSTFTDRPQQRFRNETSATYFVKDKQRPLILLQWAVGTTPVAKVPPVDDMSNIVAWQNLTYYADGFQGIGSGRLYAPPFRHQRLFQHNTIYYTFVRAMNELGFENIVGSKGFLVDLTPPDRAEVYGGLRRGSHVMYTQINTVVGLNWDVFIDRETNIINYYRALGTCPCDADIPSNCTSGTFMDDKLPWERFEPTTTDRVDNISPPLADGSYFWRVKATNWVDLVSVPQCRRFVIDTSPPYFVAIGARTCEFNLCVYMDYDPLTDILSAQWKAVDPESDIQYYEYALGTDPTDISIMAWTNVGLNTTYLISAPPSGKRLVAKVRAYNNVLLTARAYSNEIFLDSTPPIPGRVFDGPILQVDLAYSNDDQRLFFNWDNFNDPDSGMRGYYAIMANASGPFSRDDEVDLYPENVSKDLLFPMQTNSVYRTMIVGKHGGAFELTSNATSDGILIDMTESAFERPTALFDGSVVGIDQRFQYISSALTANWLPITDPQSLIARLDVAYVQGSFDGPQGEYAKIPEDEFEGVRVLNETTISAISHLNLIHSNRYFFVVRAEDGAGWVTFFHTDGIIVDLTAPTYVYMRDANLLVDLDFQSHADNLTMYMHVEDPESGFAYLDYQLWMASPGVSMINGPNSMKAAADPLRPDAYEFEKQSIGYTRFECTPFTQRLNSHKCAIVVLPIAPFVINPSATYFFVSRAINQATLETSFQTNGIAVDTTPPEMLYAYMGLQLPERSRQYDNKTIYGNWLGVDAQSDVKSYKGLLVTIGANADDKYNPKVPGGLFDSGHWYGVCDGGVESGSEPLSKALTLAMKPGSTCTNRKKQRVTAVGNWTDFKIGRYGRLDLSPDQQLIVGYQYFIVVYATNGALLDSFPLWSSQGVLVVPAPAPGLVLDGPAGADIEFTRGYTVVTASFFGFTSFAYGFTAFEVAVGTGNGTNYMTNILEFDDDLVVVTSKDLTSGGGFVHIALPLEPSLRYNVTIRGRTQEVGDDGSYITVFATSNGFVPDIQPPLLTNLRTGIDRPAHTTYPLDGYQVSGDVFPAKWSATDAYPCAKVAPFKCESSGLNTISYAVGTYPYGGDIISKTQSTRFSDLQLEIGKLIDPRNSSRVLFSNNGTSYGLPIIFSLWATDRIGLETSIASMGVTVDQTSPSLGAVDCGGEFQSDQKSFTCVWRGFNDPESGIVLYTFSVGTFPGDTSVVTNVTTLDKAHRSRGLNLLHGRTYYGTVSALNRLGMESIASSSGVFIDTTPPVGSIVIEVSDFYVESRHGLAFYAKNITDYDDDCQTSPDTILVRWLPFTDIEKTPVTRYDVAVGTTRGGIEILPFVNTGTFDSLASYYEYTIRDLILSPSTKYYVTVRGYNAVNLFGTASSNGIYVAFSPNPFPKCTYVRNYIPDLINKATGEVLDATETKANKALGIAWEFHDGCNDDTLTYEVRITTNNGDAEIYPWTALLGARGAVGSVYLEELNLTNTFSYKVSVRATNVLGFTATKSGNAIKVVNGGPPSPGKVFDGSQPGVDIDFQASLSVISATWSDFVDFDGGVVDSYEWAIGTDPRFDKLMKDVLDWTPVQNATAATSGVLAELTPLEVTYYVSVRATGKYGLSVIATSNGIKVGFAETELKLDLGIAIGDYPGSQLAFQQGIANFISKQYGLTDFGINNIKVIDVSAVKLFDVEGGRFVVGGAPKKNVTEAPVDASVPLARRMVYGGDIAGEIARDVSARDDRVSWQGERHSNLVVRTVYRRDTNGTNNATFANETLSLDNRPDDFVPVIAPAAPSVRVSFVIDYPRIADKLKMTDDQFAENVAGKLEVQSTKKCKDDGSPLVGPAAAAATAKSCLDVTIGVPVNEVTLDLNEPEGGTVWDGIEEGGVDVDFQTNTDSLTVSWTEFKHSEGTIRYEVAVGLDPSPVVFQNNSRLWSLKNDGAFEILNFTVALPECPKEIRAGAEPCFPASTVTLTGLGLKHNVTYYATVKAVSRIGTIKCTTTTGVLVDTTNPTAGTLEFQTTAPPLIAPNAFDVIMDIPPLSARVRYQADVTQVVLSAKGFSDYESGVAAYYSAVLSYPKSMCTQVPVMGAPPSGATVVDELTGLAPYPFYIEAGGGPWAKHISSFNVSSPSVYYVPFANNDTASNFLMANVTQRYNSSNTLQIDGLTMTTDNIYYVAVHARNGARLGSFAHTRGMMVDSTAANRGSIVDGVDLTNDLAYQFDNTTLRGAFYEVSLQTQTVCDRLVENFTLSAGRANWKADNFTFDRTAQNARAVVLSPLRVSHSAANGTTITIADGSGISAMSGGSFTRVGVAGRKMNNGRYRWRMQAALGTGAVTTVAFFEGDRATFPMNTPNECSRACYASPYVRGFAIQFYGDDLVTESSSGATVAVRGNVWFTTGTDQITFRSLALRFDNGTEYDPYASSLQYEVVIRNNDVSLFIENSFVVSFSLAYRMASVSITVAGWANWQPQNSPPIAARFSGFELPNGDGRLCEHADAFLDTESPIVRYYYAVGTSPNGVDILPYTNVTDPNVCMPCRGDPCDTTYCDPKCDATKPRVISVQATGLKLADYAIYCNVNNGGCDKNANCTTTTRPEDHFRTCTCRAGFNGTGYGKDSCVPQKFCAANLKLCDPDSSTCVELPNIGSFVCQCNSGFAKDTAGNCINENECSAQNQQLDTFRCSPYANCIDSPGSYACVCKKGFAGDGKKCANVDECTTTPNICGLNTDCTDVFGSYTCSCKPGYFNQSGVCIRGGDTCAGSLQMKVPDVGESSRITGIIDPTSTPVVVPACGPRRTGSFGTWNKFIGTGSPVSLTTCVPGADLFAIDTVIEVFRSDANDCTGLSCVAVSDDAEDCGLLSRTAPFTAELGVVYHVVVRGVSASVSGRYALDLYNYGIIDAVCGCTNGGTCDLQTKKCACLPGHSGTFCEQKIDRSWCDEGNGALCDPHAECVNFDNTGLNGTCQCVAGFEGDGFTCANIDECETQQFPAGQACDFIAQCEDTYGSYNCRCPEGYLPSGGRGPNSCQTDQSQYANKDKDTVQETRFPITYYVSVQAVNAAGLITLGVTNGLAVDTTAPSFTSIEHLDILAPDDKADLDTSFQASADTLIVRWKVEDRDSGVVKMRIALGTDAAPMSLSGGGYLDLPATITKYTYVSPSPLVQGAIYKAILVAQNGAGLTTTLPSHGVKIDATPPSLAAAWVVDIAEVDLICQQQAPLGTFPIFKQTDDVDWSIVSRRMTVAFGGFADPDSTIETFDWAIGTTSTAEDVLPWVEIGPPAASASPLKGSYATVTPLPPGSETPCENNGAGDLRTICKGGFQYWTKNDTMFLPNFLLERPRTYYNRVRAWNSVRLYVVKASNGVKVVDECSAGSSKCVSATTKPFSSCPFAVPDKAKPVIVTPPPLNYNYVSSGFTTGIGAEEVVLAPLRAADFAATYSGATATVGVSAVDNLPPYQTFLGPSIMPRVFSGIDEVTNPGPLASPATLTINWQADTTNMVNTTNERVDLVVWNEAEKRWQDASTTCTGAPTPRVVTSSSITVKVCLIGQLALVKTKIVALTPNMLTCADSGCIGAVKFVSNGDTATCYCDITCMKFGDCCSDYLKFCPRPTL* # ORIGINAL: g8721.t1 original gene structure, not modified by PASA NODE_2028_length_8021_cov_60.0015 AUGUSTUS gene 352 7867 . - . ID=g8721;Name=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS mRNA 352 7867 . - . ID=g8721.t1;Parent=g8721;Name=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS exon 7598 7867 . - . ID=g8721.t1.exon1;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS CDS 7598 7867 . - 2 ID=cds.g8721.t1;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS exon 7094 7281 . - . ID=g8721.t1.exon2;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS CDS 7094 7281 . - 2 ID=cds.g8721.t1;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS exon 6661 6810 . - . ID=g8721.t1.exon3;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS CDS 6661 6810 . - 0 ID=cds.g8721.t1;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS exon 1869 6339 . - . ID=g8721.t1.exon4;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS CDS 1869 6339 . - 0 ID=cds.g8721.t1;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS exon 352 1598 . - . ID=g8721.t1.exon5;Parent=g8721.t1 NODE_2028_length_8021_cov_60.0015 AUGUSTUS CDS 352 1598 . - 2 ID=cds.g8721.t1;Parent=g8721.t1 #PROT g8721.t1 g8721 IAPTTNVPSTSPRLPTATVTGGTLRQDSQSHAEKKCFIISTEEKNVTDVSSAENDAASKKTGKRKVLSDSEGEEEKSRAKAPRTDVIAEECVYDRCERAFAAGLTDEAVTAVIASLARLESSPSKPDVATFVALVRVARSYPSVMTRPDVASRLLAMLARDPSHEGRAIRGSGTSPVLPVFAAGVLAKAFASVELWPLDFVRVFVDDAANERIWVDHESARPFILPILQALGGMAAPDVTLEEANSVGGGRRRHTSGSSGAAAAAAIIASGHVLASVAAEGADDPSDGDGNDTNDAALLRVRSSHRPAADRQGGGGSSLGIVGGERLNRFAGMDALVQDVALGALHDALSRRPSRENPRHLVRYLIAVSQYPEARLVAAQSLDTWLAHPTASRHARDLFSVLTGRVATDTKEDIAAVMSLLRLRTQRLPPKMYADGMRDILSSNSALAAHALTAIVTAETAPVHLNETKSPSALVLVPSLLSVRAVENVFASQIVRRILALVSDRPREDHRPVFRNLIRRAIPKYSHNNESRNFSLSTFCASLFSVPLVFPEAPRPPAEVAVRERALACIVDIATVSCMVCVSHALSVPGSSGVNALSTVLNEVAEAQSCVFAWFGVADEYTGGSISSALVTGSLLRLLFLRPTDVIVKEATDAQEAERDRASVTAIATGVPVSETTLTSLLSLPSHPRRAVSATDALDMLFRVTRRAALSAKADSAAVDPFFVMDAQGIVAGLASLSEAIAAHGRRLLFNSENTHTVAQQASSTKTIADETERLRWRVLCTGALLCAVFPTTIGRFVWDDAGCSTIRELIAHAITGRVHPNIIPVEGVEVMAEVEREVGLRHMLCRVRHPDFIASIMADGDFSQSSAWLRNLTAAEPDVIGVLPAPSLAELLLCDDSAASVPERGGMGGESPHMIARILDTLRTDGDDMPSRTATCIAKYISSPSKSMRKRAASMLMALFAAAAESDDASLHVSNASWIDTGMSRARMSPAASAVLFAGMKDAVDGVETEPELFAAQLVCVCAATSRSTNGASMVDWIHALFVRRRLISRHALLIPGCAATVTSLLLSYSSALVSESGDKSSLASCKLAGLLLWTTATATSIHGSLPGDAQQTHRVEEETVTRVLSLVSAVRTQDLLSGLPFDMAVDLLKSSTDCVSSCAATCFLQTPLTVVVRAAAASAVPDASVCILLRHLNAACVDASRRSLFLSDLLSLPAKDRAHVIAVALRRARYFQAQLGSSFDALIGTLLSKSHANATLYPGATNVSANPRLQHDGTYLDSNADGCLVLSVQSGDTTAAITALCARRNDERRNQREKSEEHECNSRFVNLCVDAQTNALAALVAPSSHLLPNVRADVHTAGDEGTRGRSIEGDASGASLRAVTVCVDSFRSAPCVQTAANLMAAIVYATEAVHAAMRGDPDSVYTPDDVVTAACVLASPTPRDATSNANDRILSHLAVLEACFGVTVGWERLQRDVRYVARLTKWSVAMLSAFVGENMPFSALGGLLLEWFEAANSEIFGETKSKTLDVAFPSLSAPSNREAPDTAVDRRDANGGMHLLCLSLHRSSWNTLRAWMHDLLVNRCAPSKSFDDGRLSLSPSAVLDCISALIRHPRAWRDDDDNARRGTALPRPLSVRLTPEEAVAIAGLIVRETAADNSIGCNGTRNALIEYLLLSDGDCADAVVTFLESAMSDKDHMLSSAATAIAMTAYVMNPASCGVAVVRALEACTRKPPWCTQPLPTPVSNMHVTSSLDFTIDRIIRALARSFRPAHGPQSLHASVAANSATTAPGTTHTDMHRDYEAMCAALGMAIRHPLVFIRHIPLLSAETSWLCSLEPADAHALRGHVLWLTAARLVLSLRPAVFVLSNPVTCAGGNASPVGSIIETGMSLLSRSLHSYRTSMEDACSDMAAMIGILSVAYAEDAPAQCRASLLPLIDSFDSLQRRYSAISKLSAFALFLHGKPTVSVSAADDAAPLDAEWAQVERTLASFEREFRRQGDAKACDVWSNVGNALLSAENLADRVTTTQPSRCPLFSLLPLLGTCLRSRDNGCFDLAITLFVKCVALHPGQMDTVLSLLVDSIDVTALPASRSTGRALACISSLSKGVVLKG* # PASA_UPDATE: g12291.t1, single gene model update, valid-1, status:[pasa:asmbl_6686,status:12], valid-1 NODE_3892_length_2559_cov_40.1059 . gene 331 2332 . - . ID=g12291;Name=g12291.t1 NODE_3892_length_2559_cov_40.1059 . mRNA 331 2332 . - . ID=g12291.t1;Parent=g12291;Name=g12291.t1 NODE_3892_length_2559_cov_40.1059 . five_prime_UTR 2325 2332 . - . ID=g12291.t1.utr5p1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 2207 2332 . - . ID=g12291.t1.exon1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 2207 2324 . - 0 ID=cds.g12291.t1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 1704 1894 . - . ID=g12291.t1.exon2;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 1704 1894 . - 2 ID=cds.g12291.t1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 1266 1365 . - . ID=g12291.t1.exon3;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 1266 1365 . - 0 ID=cds.g12291.t1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 943 995 . - . ID=g12291.t1.exon4;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 943 995 . - 2 ID=cds.g12291.t1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 673 774 . - . ID=g12291.t1.exon5;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 673 774 . - 0 ID=cds.g12291.t1;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . exon 331 438 . - . ID=g12291.t1.exon6;Parent=g12291.t1 NODE_3892_length_2559_cov_40.1059 . CDS 331 438 . - 0 ID=cds.g12291.t1;Parent=g12291.t1;3_prime_partial=true #PROT g12291.t1 g12291 MSHASTEKAIMNPNVDFVNFTGSVQAGHQIQSVAAKRFIGIGLELGGKDPAYVRADVNMEHAVENLVDGSFFNSGQCCCAIERIYVHKDIYDEFVAKFVELTKKYKLGNPLDPTVNLGPCVKTSAADWVRKQIKDAVAAGATPLIDSSIFPEDKEGTPYLAPQVLVNVNHKMSVMWDESFGPVIGIMKVESDEEAIKLMNDSEFGLTASIWTRDTAAAIAIGDK # PASA_UPDATE: g2764.t1, single gene model update, valid-1, status:[pasa:asmbl_7952,status:12], valid-1 NODE_5237_length_956_cov_41.109_potentialcontaminant . gene 254 956 . - . ID=g2764;Name=g2764.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant . mRNA 254 956 . - . ID=g2764.t1;Parent=g2764;Name=g2764.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant . five_prime_UTR 918 956 . - . ID=g2764.t1.utr5p1;Parent=g2764.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant . exon 254 956 . - . ID=g2764.t1.exon1;Parent=g2764.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant . CDS 327 917 . - 0 ID=cds.g2764.t1;Parent=g2764.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant . three_prime_UTR 254 326 . - . ID=g2764.t1.utr3p1;Parent=g2764.t1 #PROT g2764.t1 g2764 MIDRRLPGLSASLAAAVHSRRWRLCRWVIDRSPSAISPDKVRTAFLSAVSGCRLDFVRWFEERHPDVVASCVTDIKFALVKMRVRDMSFLRAILERHPAAFNFEDLEQNNKMVVSYDTFVVEQLLGVELVRRPMSIRGLARDGRRDVLQAAIDFVVILCKPSPSMFDPTSPDVLRNPPLVQWFRNNDAAGKFKFAS* # ORIGINAL: g2763.t1 original gene structure, not modified by PASA NODE_5237_length_956_cov_41.109_potentialcontaminant AUGUSTUS gene 2 92 . + . ID=g2763;Name=g2763.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant AUGUSTUS mRNA 2 92 . + . ID=g2763.t1;Parent=g2763;Name=g2763.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant AUGUSTUS exon 2 92 . + . ID=g2763.t1.exon1;Parent=g2763.t1 NODE_5237_length_956_cov_41.109_potentialcontaminant AUGUSTUS CDS 2 92 . + 1 ID=cds.g2763.t1;Parent=g2763.t1 #PROT g2763.t1 g2763 DMADASGAAARAASDDGVSIDLDPTDEDA* # PASA_UPDATE: g12400.t1, single gene model update, valid-1, status:[pasa:asmbl_1045,status:12], valid-1 NODE_1274_length_12502_cov_40.2915 . gene 6152 8375 . + . ID=g12400;Name=g12400.t1 NODE_1274_length_12502_cov_40.2915 . mRNA 6152 8375 . + . ID=g12400.t1;Parent=g12400;Name=g12400.t1 NODE_1274_length_12502_cov_40.2915 . five_prime_UTR 6152 6194 . + . ID=g12400.t1.utr5p1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 6152 6291 . + . ID=g12400.t1.exon1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 6195 6291 . + 0 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 6447 6551 . + . ID=g12400.t1.exon2;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 6447 6551 . + 2 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 6869 7020 . + . ID=g12400.t1.exon3;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 6869 7020 . + 2 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 7339 7403 . + . ID=g12400.t1.exon4;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 7339 7403 . + 0 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 7645 7807 . + . ID=g12400.t1.exon5;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 7645 7807 . + 1 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . exon 8174 8375 . + . ID=g12400.t1.exon6;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . CDS 8174 8278 . + 0 ID=cds.g12400.t1;Parent=g12400.t1 NODE_1274_length_12502_cov_40.2915 . three_prime_UTR 8279 8375 . + . ID=g12400.t1.utr3p1;Parent=g12400.t1 #PROT g12400.t1 g12400 MSEPPQKRARIDEEEPVPPHATDVVMLDGSATDKPSTTETASPKEASANEASIEGDAKGKGADEGAEEDDFADELLGEEPAEDATNAEGPIAPRDQIENAELDALADILLQMDEFNPIIPDAVTKHYLTKTGFDCNDVRIVRLVSLATQAFAARIAETAMQKCRFRESTEPKKRKDDGANKDDANAKKSGRRGKGQGVDEKRSVLTMEDLTFALNDAGININKPQLFA* # ORIGINAL: g12401.t1 original gene structure, not modified by PASA NODE_1274_length_12502_cov_40.2915 AUGUSTUS gene 8520 11939 . - . ID=g12401;Name=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS mRNA 8520 11939 . - . ID=g12401.t1;Parent=g12401;Name=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 11313 11939 . - . ID=g12401.t1.exon1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 11313 11939 . - 0 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 10568 11108 . - . ID=g12401.t1.exon2;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 10568 11108 . - 0 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 10064 10212 . - . ID=g12401.t1.exon3;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 10064 10212 . - 2 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 9639 9770 . - . ID=g12401.t1.exon4;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 9639 9770 . - 0 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 9273 9484 . - . ID=g12401.t1.exon5;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 9273 9484 . - 0 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 8838 8939 . - . ID=g12401.t1.exon6;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 8838 8939 . - 1 ID=cds.g12401.t1;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 8520 8661 . - . ID=g12401.t1.exon7;Parent=g12401.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 8520 8661 . - 1 ID=cds.g12401.t1;Parent=g12401.t1 #PROT g12401.t1 g12401 MGDNAMCQPAVRLQCCVDIAQSRPNHVHHHLGSSNSRKGVAKRDTSLRRAFFVSFVFLICGCIVVDMYSGALMPRFGVGSVFTWDELGTSNPLREIFERFSISDASQIAAAEDNNNILHTHKNTEGFGDAGITLSIIGFADSHAQLGIVSAHGVVREWERGGLPRNDNYVGLKAVDASDRDPMEANEKLVGPSFLCGNLLPQLNLSASQMTSPTYNFFNYNSMKQKVTGLKRNGFTAGPVDSATMILTDRAGYAALSREHPHILDGATAFVDVIIGLGYIGGSKALQLASKREVAHACGCSYDDLLLQPRTLATFTGEECSILDRLSMPPLKDTRMNGTGETTATTTQPSVWIVKPKYGEKGIGIRVVGAGDPLLRTIYERECIERRPFGNLIQQYILNPLLLDGCKFDIRAYFLIGSTDPFAVFYYRGYIRRAMTKFKLDDLSSDASHLTNTNIQEKKKGYEGDDHIWSFKQLQHYLDSNKLAPPSYVEQTLEPFIKGMAAFCFETARDNIVRRKGAFQLVGLDFMIDATLKIHFIEGNGRPGFGSQNEWKMAFGTTLATNMFRLVLRLQQNPVFASKLRLGDSTHGFEVIVSEYQEVCDGGVRFNPCAAFATAVHPGDGEPYRRWLLSSPPQ* # ORIGINAL: g12399.t1 original gene structure, not modified by PASA NODE_1274_length_12502_cov_40.2915 AUGUSTUS gene 1442 2703 . - . ID=g12399;Name=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS mRNA 1442 2703 . - . ID=g12399.t1;Parent=g12399;Name=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 2540 2703 . - . ID=g12399.t1.exon1;Parent=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 2540 2703 . - 0 ID=cds.g12399.t1;Parent=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 1826 1961 . - . ID=g12399.t1.exon2;Parent=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 1826 1961 . - 1 ID=cds.g12399.t1;Parent=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS exon 1442 1549 . - . ID=g12399.t1.exon3;Parent=g12399.t1 NODE_1274_length_12502_cov_40.2915 AUGUSTUS CDS 1442 1549 . - 0 ID=cds.g12399.t1;Parent=g12399.t1 #PROT g12399.t1 g12399 MDALLNANYRTDVVVDHSTFDALDDDPTDFAFRQELAVEFLSERITREPFLDECYAKNDFNELHEAAHKDKSGALTLGFNKVANIYLRIELRSKLVNDRKIGLVREDFESDFAALKREYAVLKTYLENFFGAPFM* # PASA_UPDATE: g9767.t1, single gene model update, valid-1, status:[pasa:asmbl_8750,status:3], valid-1 NODE_664_length_19321_cov_41.5405 . gene 4407 5387 . + . ID=g9767;Name=g9767.t1 NODE_664_length_19321_cov_41.5405 . mRNA 4407 5387 . + . ID=g9767.t1;Parent=g9767;Name=g9767.t1 NODE_664_length_19321_cov_41.5405 . five_prime_UTR 4407 4590 . + . ID=g9767.t1.utr5p1;Parent=g9767.t1 NODE_664_length_19321_cov_41.5405 . exon 4407 5387 . + . ID=g9767.t1.exon1;Parent=g9767.t1 NODE_664_length_19321_cov_41.5405 . CDS 4591 5106 . + 0 ID=cds.g9767.t1;Parent=g9767.t1 NODE_664_length_19321_cov_41.5405 . three_prime_UTR 5107 5387 . + . ID=g9767.t1.utr3p1;Parent=g9767.t1 #PROT g9767.t1 g9767 MRESPDIARTVRMCQGQSSPQRMPPQSPQKMAVAEPDLPRSQSTGSIKPTPDEQPQQQLKQTPQPQTMQTSLSASSFTFGAPATKKRSLSNSSVLPAPPAKAPEFNPVDLMRRLDREHRSIRLYVDPCRASMGRLEEKVGQRVAITHDFPGAGVSPSTMPSYRVRQIREFN* # PASA_UPDATE: g9766.t1, single gene model update, valid-1, status:[pasa:asmbl_8748,status:12], valid-1 NODE_664_length_19321_cov_41.5405 . gene 204 3325 . - . ID=g9766;Name=g9766.t1 NODE_664_length_19321_cov_41.5405 . mRNA 204 3325 . - . ID=g9766.t1;Parent=g9766;Name=g9766.t1 NODE_664_length_19321_cov_41.5405 . five_prime_UTR 3261 3325 . - . ID=g9766.t1.utr5p1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 2947 3325 . - . ID=g9766.t1.exon1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 2947 3260 . - 0 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 2421 2711 . - . ID=g9766.t1.exon2;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 2421 2711 . - 1 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 1884 2206 . - . ID=g9766.t1.exon3;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 1884 2206 . - 1 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 1464 1576 . - . ID=g9766.t1.exon4;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 1464 1576 . - 2 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 1017 1256 . - . ID=g9766.t1.exon5;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 1017 1256 . - 0 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 655 795 . - . ID=g9766.t1.exon6;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 655 795 . - 0 ID=cds.g9766.t1;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . exon 204 419 . - . ID=g9766.t1.exon7;Parent=g9766.t1 NODE_664_length_19321_cov_41.5405 . CDS 204 419 . - 0 ID=cds.g9766.t1;Parent=g9766.t1;3_prime_partial=true #PROT g9766.t1 g9766 MPRSHSGDEQDVRDRYSRRSADYDAPRPMGGPGDERGRRSLGRDTRERDRDRDRSRDRDGRDRERDRDARDHRYRRDSGGYERDRDYRGYGYRDRSPPRRDGRDWRDEYAMDRNAFAHLPFPGNPFPGAMIPPWGAFPDVGMPPFMGMPPKGPPGFPPPQPIGGFGRREGDMHGHGHGHGRDDRGSAHAQGRRHEAGDRVERASDEIMSFKQFLASQPDSIGHETAVAKYEEYKSNFTRLALAEFYKLHKEDEWFKEKYDAVLSTEASREFKEDSERRLAAFVAASDSGALGAIDFSKEDASVLVAIEDVIESTVPKVDGANASANSDENEDAMEADQLRHDSDDDELHREADADANPRPPGETSEVGEIGDSAPAEGDAKPEGDGGVGAGEGAKQSALLQARSKKAPYHLFVKTILPSISKTQLRELCATVPDFVRIAFTEPNPLRRFHRMAWIVFARGSNIYDACRKINNQKISEFTLHVVVNRNIRNRPRLAPEFHTHRIQQDASLAAELAAALDARRGLYASGEENQFVAAVTKDPGHVDPK # ORIGINAL: g9769.t1 original gene structure, not modified by PASA NODE_664_length_19321_cov_41.5405 AUGUSTUS gene 8533 10533 . + . ID=g9769;Name=g9769.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS mRNA 8533 10533 . + . ID=g9769.t1;Parent=g9769;Name=g9769.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 8533 10533 . + . ID=g9769.t1.exon1;Parent=g9769.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 8533 10533 . + 0 ID=cds.g9769.t1;Parent=g9769.t1 #PROT g9769.t1 g9769 MSDDWDTTDNVDVFSADVPHDYRPHLFKSGYCSVCDRPRAVDLHGIAKPKDMSSWIDSLEDTPSAEPASAAAVSVSAEPSAAAQNERRASQAAAAVSAHDFEEHPSRLAVCAICDKPKSNPIHTNFQRPRGPSFKASPGTSATTPHRRPSAGTAQESPAPSTPSWAQPRRSVVEEDTPEPAPRRPSDFAKGVASPAPSQASSSTVSTPVRRPSFTGGPHDFQPHEVKLGVCGVCDKPKSNPIHGDAPERPLQRKPSVNWVQPPSSSPATPSPAASSIPSSESASGSFERRASNAAAPPAVVAQSSDRRPSTTAHDFEPHPTRLGVCASCDKPKTNPVHGGGDTNNAAPAIFRRTSSASTVVPGQVRPLSQTPTPAQTPAVEEKEIAQTQPVVPSQDASTAAGGLQRRPSYTGGTHDFVAHEVKLGVCGVCDKPKSNSLHGDQASSQGTVGRARAPSVKWVTPPSAIAEEANTTATAPATAQPTPASSSSTHTFEQHPTKLGTCAVCDKPKSNAVHSKDAPASTPKPAQPSNAQGAAAFQRRTVSASTLACAPAQSFTPAKPSIAPKPSVTSGKRMSLPGGPSTAAVTPTQTQQSSFVRPVQQPAPAPATITKLAGDAKTTHEFVQHEVKLGVCGVCDKPKSNALHAAQGQQQRPRAPSVNWIAPPK* # ORIGINAL: g9771.t1 original gene structure, not modified by PASA NODE_664_length_19321_cov_41.5405 AUGUSTUS gene 15613 18791 . + . ID=g9771;Name=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS mRNA 15613 18791 . + . ID=g9771.t1;Parent=g9771;Name=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 15613 15799 . + . ID=g9771.t1.exon1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 15613 15799 . + 0 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 16400 16597 . + . ID=g9771.t1.exon2;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 16400 16597 . + 2 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 16849 16934 . + . ID=g9771.t1.exon3;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 16849 16934 . + 2 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 17270 17379 . + . ID=g9771.t1.exon4;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 17270 17379 . + 0 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 17826 17988 . + . ID=g9771.t1.exon5;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 17826 17988 . + 1 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 18295 18451 . + . ID=g9771.t1.exon6;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 18295 18451 . + 0 ID=cds.g9771.t1;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS exon 18739 18791 . + . ID=g9771.t1.exon7;Parent=g9771.t1 NODE_664_length_19321_cov_41.5405 AUGUSTUS CDS 18739 18791 . + 2 ID=cds.g9771.t1;Parent=g9771.t1 #PROT g9771.t1 g9771 MADSRKSADSVHGRLPHEKNKGGSLKRTIGIAVGLFFVALSAFFYILPSMMVIEKSTAPKIKPRCGTFYEYWSESCGAIGTSTARYCSEGGEPVHKSACRTHFSPQSRSCGLLGIGCRAKCRKLTPPCESGLVRFATTSIIVSPKAHTVELYATRSKGKDSRAIITVNYTCPSFTPKELSVDADVSEAVTPFSTSDPETFIDSRDDERYMRYRGGQCTHLLTYHRNEAGHCPRGVLERQPHQLVWIEEDGAAKALHLNLVPFIEAGISHVVVSIARGEGADVSEAQVTTIWIADDSIKNAATTDTTTANLKTYDHFI* # PASA_UPDATE: g9770.t1, single gene model update, valid-1, status:[pasa:asmbl_8753,status:12], valid-1 NODE_664_length_19321_cov_41.5405 . gene 11707 14986 . + . ID=g9770;Name=g9770.t1 NODE_664_length_19321_cov_41.5405 . mRNA 11707 14986 . + . ID=g9770.t1;Parent=g9770;Name=g9770.t1 NODE_664_length_19321_cov_41.5405 . five_prime_UTR 11707 11779 . + . ID=g9770.t1.utr5p1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 11707 11873 . + . ID=g9770.t1.exon1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 11780 11873 . + 0 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 11996 12380 . + . ID=g9770.t1.exon2;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 11996 12380 . + 2 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 12544 12645 . + . ID=g9770.t1.exon3;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 12544 12645 . + 1 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 12802 12908 . + . ID=g9770.t1.exon4;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 12802 12908 . + 1 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 13045 13133 . + . ID=g9770.t1.exon5;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 13045 13133 . + 2 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 13306 13632 . + . ID=g9770.t1.exon6;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 13306 13632 . + 0 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 13850 13990 . + . ID=g9770.t1.exon7;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 13850 13990 . + 0 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 14132 14191 . + . ID=g9770.t1.exon8;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 14132 14191 . + 0 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . exon 14363 14986 . + . ID=g9770.t1.exon9;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . CDS 14363 14485 . + 0 ID=cds.g9770.t1;Parent=g9770.t1 NODE_664_length_19321_cov_41.5405 . three_prime_UTR 14486 14986 . + . ID=g9770.t1.utr3p1;Parent=g9770.t1 #PROT g9770.t1 g9770 MSAKCSICAKTAYAQESVTVDGNTWHKNCFKCATCALRLDLQTYRFGFGENSSVAYCKKCVPLIKATDTADRLDISSALARPKVGLVNDQVRGELAGQKPCENIDSMAISGRIHAPKQGIINEQIRGELAGQKPCENIDSMAISSRMHAPRRSVVNEQIRGELAGQKPHEDINSMAISSRIHAPRRSVVNEQIRGELAGQKSLEDTTSIGMSARINAPRIATVNNQIRGGNRKMRLSDVISVHVTCDEPEKVLESSIVEVRAYLATLESKEFGIRKAQQRRTMIRTASEEDRLSSHTATADDTRVKPISVIAPEESCADPQPMTPRESVTEAIAEVCEAPEVPAADEVPLSPSALKSINPADVEPSERRESILLQRMQLELVVQRHLATMYLKELERVRDAQASDHNELARLREEIQTHDMLDVAQELYDCPQELLSSSANNYGYADEPIYASIDEIYSVPQKSVPARRPSAFAY* # PASA_UPDATE: g9768.t1, single gene model update, valid-1, status:[pasa:asmbl_8749,status:3], valid-1 NODE_664_length_19321_cov_41.5405 . gene 5415 7603 . - . ID=g9768;Name=g9768.t1 NODE_664_length_19321_cov_41.5405 . mRNA 5415 7603 . - . ID=g9768.t1;Parent=g9768;Name=g9768.t1 NODE_664_length_19321_cov_41.5405 . five_prime_UTR 7551 7603 . - . ID=g9768.t1.utr5p1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 7512 7603 . - . ID=g9768.t1.exon1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 7512 7550 . - 0 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 7203 7322 . - . ID=g9768.t1.exon2;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 7203 7322 . - 0 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 7017 7047 . - . ID=g9768.t1.exon3;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 7017 7047 . - 0 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 6809 6827 . - . ID=g9768.t1.exon4;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 6809 6827 . - 2 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 6416 6619 . - . ID=g9768.t1.exon5;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 6416 6619 . - 1 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 6144 6231 . - . ID=g9768.t1.exon6;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 6144 6231 . - 1 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 5935 5976 . - . ID=g9768.t1.exon7;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 5935 5976 . - 0 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . exon 5415 5686 . - . ID=g9768.t1.exon8;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . CDS 5477 5686 . - 0 ID=cds.g9768.t1;Parent=g9768.t1 NODE_664_length_19321_cov_41.5405 . three_prime_UTR 5415 5476 . - . ID=g9768.t1.utr3p1;Parent=g9768.t1 #PROT g9768.t1 g9768 MEVTEIFERYIAKAGVTLDIASVTATVLPNVSALFAEAKSALPSSPLTAAQLESLFRYKVPFSGPDGACSLSKALDPTPFDLGRDAFGPDYDITSAECSESTLALRLFRLNELVRRLSELTLFDWLGVYRAVSPSDGGAAYLVKEAYVGAPSRAKFPLTNEFAEMSNNSTVGLTGKAKLVQSVGDYEGPYYVCDARVQSELCAPIFSPDGTRVIGIIDAEAFASGFLTPERTATVLLVCALLGESNLLCF* # ORIGINAL: g3112.t1 original gene structure, not modified by PASA NODE_5535_length_811_cov_75.5897_potentialcontaminant AUGUSTUS gene 413 766 . - . ID=g3112;Name=g3112.t1 NODE_5535_length_811_cov_75.5897_potentialcontaminant AUGUSTUS mRNA 413 766 . - . ID=g3112.t1;Parent=g3112;Name=g3112.t1 NODE_5535_length_811_cov_75.5897_potentialcontaminant AUGUSTUS exon 413 766 . - . ID=g3112.t1.exon1;Parent=g3112.t1 NODE_5535_length_811_cov_75.5897_potentialcontaminant AUGUSTUS CDS 413 766 . - 0 ID=cds.g3112.t1;Parent=g3112.t1 #PROT g3112.t1 g3112 MGTVNVNASFDLEGLVKSIAALEVPGVADFIDNESDRIYKERHKSWTGFKPQDVLDVWKSVLKLSLLGAMVPAFEAAKQGNHDGVATELAAIKSSFTELIPKGLSTKLVLSAPSVFV* # PASA_UPDATE: g1719.t1, single gene model update, valid-1, status:[pasa:asmbl_5933,status:12], valid-1 NODE_3361_length_3643_cov_39.7926 . gene 107 1110 . - . ID=g1719;Name=g1719.t1 NODE_3361_length_3643_cov_39.7926 . mRNA 107 1110 . - . ID=g1719.t1;Parent=g1719;Name=g1719.t1 NODE_3361_length_3643_cov_39.7926 . five_prime_UTR 663 1110 . - . ID=g1719.t1.utr5p1;Parent=g1719.t1 NODE_3361_length_3643_cov_39.7926 . exon 610 1110 . - . ID=g1719.t1.exon1;Parent=g1719.t1 NODE_3361_length_3643_cov_39.7926 . CDS 610 662 . - 0 ID=cds.g1719.t1;Parent=g1719.t1 NODE_3361_length_3643_cov_39.7926 . exon 107 377 . - . ID=g1719.t1.exon2;Parent=g1719.t1 NODE_3361_length_3643_cov_39.7926 . CDS 107 377 . - 1 ID=cds.g1719.t1;Parent=g1719.t1;3_prime_partial=true #PROT g1719.t1 g1719 MSQPPSAAGIAKVPDVPRPPIGRGRGGPPVPGVTAPGPIAAPAAHVPSVTPAATQPSLATATVLSTAMELGLDDDMMDDMDDSDSSEPSKARRDAHKRANHNALERKR # PASA_UPDATE: g1720.t1, single gene model update, valid-1, status:[pasa:asmbl_5932,status:12], valid-1 NODE_3361_length_3643_cov_39.7926 . gene 1401 3200 . - . ID=g1720;Name=g1720.t1 NODE_3361_length_3643_cov_39.7926 . mRNA 1401 3200 . - . ID=g1720.t1;Parent=g1720;Name=g1720.t1 NODE_3361_length_3643_cov_39.7926 . five_prime_UTR 3160 3200 . - . ID=g1720.t1.utr5p1;Parent=g1720.t1 NODE_3361_length_3643_cov_39.7926 . exon 1401 3200 . - . ID=g1720.t1.exon1;Parent=g1720.t1 NODE_3361_length_3643_cov_39.7926 . CDS 1558 3159 . - 0 ID=cds.g1720.t1;Parent=g1720.t1 NODE_3361_length_3643_cov_39.7926 . three_prime_UTR 1401 1557 . - . ID=g1720.t1.utr3p1;Parent=g1720.t1 #PROT g1720.t1 g1720 MPPSSPSRGNGADGTTQRPLSLLLALMAQKIVLPLVFIAALWILYFAPETVASIAPPLWPRWLSFGGNERLVNVLPPQPNTMFDAWQLGQINARLLLKEQALLADAASSTAEHGHRDDIAASIQALLSEAAVIVGRDAPLTSSELHGIATMLKELEGGQTLSQRVRGFLSFVNVMWFVSICGVGITTLPILIGLGRVLGGPLSRIIGTLYADVVVPVFVMLIPLYEYIAFVGCYLAVVSGVRSHLAGEHDTGIYVALSGLVLSIVAAAYSVMRHFVYRLQRGARPRWGQSEALTALQESENARLYAELRAQLGPSCETHLLNLYVMCIFTPVTALLQSHLLGFIAVVSLYSLLGFSVVSRGLCFVIGFDSPSSLERTLTSSTALVSGFFALRISSAYGARGALATFLSPFTTGVMAFGVSVMLLAALIQSSKFYRANDYGHRQRVALAYYIATIFFGNVFGVIAMSNSGTTFLALYVLDKGAELVWQKSGLWTAFLLSVTGYLVSLFLHAHPRFVSSCFDVASLGGDTSSYVQ* # ORIGINAL: g6997.t1 original gene structure, not modified by PASA NODE_2046_length_7947_cov_43.9038 AUGUSTUS gene 33 2525 . - . ID=g6997;Name=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS mRNA 33 2525 . - . ID=g6997.t1;Parent=g6997;Name=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 702 2525 . - . ID=g6997.t1.exon1;Parent=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 702 2525 . - 0 ID=cds.g6997.t1;Parent=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 409 575 . - . ID=g6997.t1.exon2;Parent=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 409 575 . - 0 ID=cds.g6997.t1;Parent=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 33 150 . - . ID=g6997.t1.exon3;Parent=g6997.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 33 150 . - 1 ID=cds.g6997.t1;Parent=g6997.t1 #PROT g6997.t1 g6997 MEGVIDLSNDSPAADASPAAPANPRKRAARGRPPGSGKKQRVQGAVAAPVAAPSAPAALTNPHADSHVSAPNSVEAQIAMQVDAPDVMCAAPSANALNSINAEQVRAAAPTLPASASATSTNSAVVVMVPGSPANVAPVGVISPLQNNGVTGEVAQAAQLLIAEAARQYPSSSLLDAMRQLTAELQRREQSAKAAPAATVVDSRSAGSGPSGAEATPTPAPVAPPTPATDAAPAWPKAKQLTPAQRQAAAATAEAIRARNAAVGAERARPAPVVILDDEDDGVGNEVVANDAFGPVDNDIECMQYYTKVVGVQHYNGMVTRGEGVILRRQPSNPYDQNAIQVINMRGEQVGHIPATNAFVLAPLCDSKFVRLEGYIYGGQESRFFHPLAVKVFCQPESEEYIVRQLQRLPAEHHRSFETPAQRIAREMAMARKQKAAVPAPEISEWQRLVGAGAETERMRAAIDAVLMRPVSERDFESMRKADLPEGLRTQLLPYQCQGLAWMANREHPLPAAAGRRVLFWEYRPDVKAYYNSVACSCSRDVPKPVRGGLLADDMGLGKTLQIISLLLVPPSGEGFASNPPPVDTTYGTSTLIVCPVTVIGNWETQIKTHVDAGRLSVYVFHGHNKSISRAALAKYDVVLTTYNAVASEFKNAKTSPLFGKWLRVVLDEAHVIKSRVTQMSNAANALDAQRRWCVTGTPIQNK # PASA_UPDATE: g6999.t1, single gene model update, valid-1, status:[pasa:asmbl_3355,status:12],[pasa:asmbl_3356,status:12], valid-1 NODE_2046_length_7947_cov_43.9038 . gene 6054 7918 . + . ID=g6999;Name=g6999.t1 NODE_2046_length_7947_cov_43.9038 . mRNA 6054 7918 . + . ID=g6999.t1;Parent=g6999;Name=g6999.t1 NODE_2046_length_7947_cov_43.9038 . five_prime_UTR 6054 6259 . + . ID=g6999.t1.utr5p1;Parent=g6999.t1 NODE_2046_length_7947_cov_43.9038 . exon 6054 7918 . + . ID=g6999.t1.exon1;Parent=g6999.t1 NODE_2046_length_7947_cov_43.9038 . CDS 6260 7918 . + 0 ID=cds.g6999.t1;Parent=g6999.t1 #PROT g6999.t1 g6999 MASGANYDGNTPDSEKVSFVESAPNIPRGASYGVLPPVTPGMETIDPTFLATAISTPRLLLIGSRVKTPGVLVNACREDVVPVLFQYEGTTSTDLIKLVLDKLEGRKCTSIGLVAHSDPGIIYICGASGEKPTSLTSLKDVRQLWLDVCGTLDPGGDMRVDLLASNVAASADGLQLLRSLETLTRTHFTASQDIAGGAIEAPASARRYNDVQNGGDATPGVVGIGELYFRPQKLKGWSLQPTGQLMDQFEKIRVVGKGAYGAAVLYRKRDDDSLVILKEINMHDLNASERQMALNEVDVLSILDHPNIISYYDSFEEDGTLMIEMEYADGGTLAQYLANQQSEIPERDIITMFRQMVDGVAYIHANNIMHRDLKTANIFLTSEGIVKLGDFGIAKVMSTSRNSNTVLGTPYYISPELCEGRSYNQKSDIWALGCILYEMACLQRTFEGTNLPALVNKIIKGTFAPVKDSYSEEFRQLVNELLQRDPEVRPSADEILTRPVVQRLSSRSIGGLRSASATSGGDGEVAKASTQADLWTWGSGKLRPLQISFPPR* # ORIGINAL: g6998.t1 original gene structure, not modified by PASA NODE_2046_length_7947_cov_43.9038 AUGUSTUS gene 3170 5262 . + . ID=g6998;Name=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS mRNA 3170 5262 . + . ID=g6998.t1;Parent=g6998;Name=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 3170 3752 . + . ID=g6998.t1.exon1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 3170 3752 . + 0 ID=cds.g6998.t1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 3886 4043 . + . ID=g6998.t1.exon2;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 3886 4043 . + 2 ID=cds.g6998.t1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 4162 4205 . + . ID=g6998.t1.exon3;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 4162 4205 . + 0 ID=cds.g6998.t1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 4346 4473 . + . ID=g6998.t1.exon4;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 4346 4473 . + 1 ID=cds.g6998.t1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 4669 4796 . + . ID=g6998.t1.exon5;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 4669 4796 . + 2 ID=cds.g6998.t1;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS exon 5083 5262 . + . ID=g6998.t1.exon6;Parent=g6998.t1 NODE_2046_length_7947_cov_43.9038 AUGUSTUS CDS 5083 5262 . + 0 ID=cds.g6998.t1;Parent=g6998.t1 #PROT g6998.t1 g6998 MKEKTKMAPGKVLGGSAVAPATDNDTRRSTSSVADDGTRTRNDAAIEVASYVNPLKEAKTPFIMPSPLPRGLDYTTTHYVNAQNLKLHMHRWIPSEDTPRAIVVALHGLYTHIGYSYSSVDYTFSGSLIEALTRVGYGVVGIDHQSMGMSDAWSNKRGNVRRFTDLVRDISEVIRLVKTQFVGVDVYLSGVSFGGMMALRTVLASEPDLVRGVILCAPAIRLAPASCPSKVVRVAVSALGAVFPSMKLVAEPGDANDFWQKRYLTDPYCYTEAMRARFCAELFRSFEKLDKSIPALQLPFILFQGQRDEVVDPAAAKHLFERSGSTDKTVFYITNMAHAMTGEPGCQAAEETIVARTTEDGASGTATPTQLRASNAQLFKGAVRAIIFERRLRKSGWKGNLMASLR* # ORIGINAL: g2967.t1 original gene structure, not modified by PASA NODE_5582_length_794_cov_72.6328_potentialcontaminant AUGUSTUS gene 358 639 . - . ID=g2967;Name=g2967.t1 NODE_5582_length_794_cov_72.6328_potentialcontaminant AUGUSTUS mRNA 358 639 . - . ID=g2967.t1;Parent=g2967;Name=g2967.t1 NODE_5582_length_794_cov_72.6328_potentialcontaminant AUGUSTUS exon 358 639 . - . ID=g2967.t1.exon1;Parent=g2967.t1 NODE_5582_length_794_cov_72.6328_potentialcontaminant AUGUSTUS CDS 358 639 . - 0 ID=cds.g2967.t1;Parent=g2967.t1 #PROT g2967.t1 g2967 MTKTLVIDPSGKQKKPRQQAENVVWLDGSAATYDAILSGLFWLFAKDGGCTNHVLMYSGELKTRFGHIGIVPYDCRENGVILTTHILSIIAAME # ORIGINAL: g2396.t1 original gene structure, not modified by PASA NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS gene 425 3918 . + . ID=g2396;Name=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS mRNA 425 3918 . + . ID=g2396.t1;Parent=g2396;Name=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 425 1945 . + . ID=g2396.t1.exon1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 425 1945 . + 0 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 2145 2592 . + . ID=g2396.t1.exon2;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 2145 2592 . + 0 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 2759 2896 . + . ID=g2396.t1.exon3;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 2759 2896 . + 2 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 3007 3144 . + . ID=g2396.t1.exon4;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 3007 3144 . + 2 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 3261 3402 . + . ID=g2396.t1.exon5;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 3261 3402 . + 2 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 3499 3605 . + . ID=g2396.t1.exon6;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 3499 3605 . + 1 ID=cds.g2396.t1;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS exon 3761 3918 . + . ID=g2396.t1.exon7;Parent=g2396.t1 NODE_2962_length_4635_cov_20.5956_potentialcontaminant AUGUSTUS CDS 3761 3918 . + 2 ID=cds.g2396.t1;Parent=g2396.t1 #PROT g2396.t1 g2396 MGPFHFLLMFVIAALSISSSMAQVTYNFTVWTLPGASNDGYTNAPVTCKIYGVTATSAAFVVNNITARSVNFTQSLAVNVGTVLRLSIVPNADNWRPERITIASSTGTYNFKFAAADVLVDATASPKEVFVCAIPPPPPNGAFNCSSTYASSSSNGCSLSCATGYTPSTSSSAACSSASGTSYLGYANVNAVCNMNCNPFGTGGPLCGYVNRGQCRVPDVCGPCLSSYGVLGDPLSSTSDSNVACTKYTIAYSIKLAMSSATSGGTDLTCSLQLLGSRLSDSTVALNDPATKAITAGKTYTYSIQSNFLAFEIVRGMRIACTGVSNWWLPLYFEVTGYDGAIGNTPIRFPFTTNDRLDTGTTYIFAAPPPGTPANGKINCTTSFAGKTCPIVCDSGYAPAGGNGAGSVALPGTTQPFSTASVDSAVCVPDCSARNNSYCASLHREPCGAFVNTCGPCMDGFDTSSRTGLFEGDTACAQFVNYDVKITTGATAFGGPFKMKIFGDLGSTDVILVTSNGFAASSTFRGTFYERYIGTNFLTVQFGFVGLSSTYYDYWNGGHIVLSYDTDDYWRFEAAPPLTTIKSDTLYTACNFPPNPLNGTLFCDSTLTIASGCSVTCNTPTYTATPLASRVYTCGSDGSYRDSSMNRLNASLPFCQISNPCTVNGGGCGGNSICTNPSPTVVKCACTNTSFYSPTADGKNCALVNPCTSNNGGCGANSTCTYTGTGARTCACVSSEFQSATNDGKNCTAVAGCVNCVGNSTCNSTLGRCVCLSGYVSDLNEGRNCRLATVCDSNRGVCGTFSTCAAGAGGKANCTCFAGYSSAFTNNTNCAPTNNCLKNNGGCGANTMSVCTTTGPGLNSCQCLDGFTSPNGTQRDCRGMCGP* # PASA_UPDATE: g6150.t1, single gene model update, valid-1, status:[pasa:asmbl_1764,status:12],[pasa:asmbl_1765,status:12], valid-1 NODE_1493_length_10959_cov_40.0277 . gene 5847 8093 . - . ID=g6150;Name=g6150.t1 NODE_1493_length_10959_cov_40.0277 . mRNA 5847 8093 . - . ID=g6150.t1;Parent=g6150;Name=g6150.t1 NODE_1493_length_10959_cov_40.0277 . exon 5847 8093 . - . ID=g6150.t1.exon1;Parent=g6150.t1 NODE_1493_length_10959_cov_40.0277 . CDS 5847 8093 . - 0 ID=cds.g6150.t1;Parent=g6150.t1 #PROT g6150.t1 g6150 MAAQPTLTAVRQLLIFFLKRLLPRRGTLFRTVTALIATLAIGTILIAVGISLNVVFSLNILRIADIFSTGPAATAPTPPANIAAPSAAPLARPQAGNDHEVSFNVTEYALGCLDRFSAGRWCQNETAWCLEGSLGSAFGEFDECQFHRFTAADIVNAGHSKWLMFLGDSHLEVDYVELISMLDAANANGRLPRMARYHDALERPHVVEQESSESTVPPKPNMMCVPRDEDYNLERCGLPQTTDNIIGGFKFSFRRKLYPYSRGDKIFLNRWRLAHPEIRRPDFLVISVGRWLGRHGNGNQIALYLSELTSYMRDLRTLFPNTRILWMSGSSKLPVVCPAGEELTAGRGPSHNTTATNCTCASVGTAKERAETWIETALRNIGVPILDRHAITMYMPKWFTAARRSTEAGWSVPWSCHNIRGMPAHESLQGVLNYAFGLWDDVPTPGAAFVVPGDGGEYDGEAADGAQAITIGEDANSRDDFSSPAAMNATNDKAYNGTNDKAYNATNDNAYNATNDNVYNATNNNAYNATNDKAYSGTNDKAYNATNDKAYSGTNDKAYNATNDKAYSGTNDKAYNATNDKAYSGTNDKAYNATNDKAYNATNDKAYNGTNDKAYSATNDKAYNATDRTARDDNANLNHTELRTVDSDARLTKRPPIANISDVNANGANFKPKGLTDAIHKELRLPVFGGANRNAGTGGVNRANAGTGSVGAFGVKPRSVGSNGTETKSRDTNASEKALSPVKDATGH* # ORIGINAL: g6151.t1 original gene structure, not modified by PASA NODE_1493_length_10959_cov_40.0277 AUGUSTUS gene 8632 10874 . + . ID=g6151;Name=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS mRNA 8632 10874 . + . ID=g6151.t1;Parent=g6151;Name=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 8632 8848 . + . ID=g6151.t1.exon1;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 8632 8848 . + 0 ID=cds.g6151.t1;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 9143 9360 . + . ID=g6151.t1.exon2;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 9143 9360 . + 2 ID=cds.g6151.t1;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 9773 10057 . + . ID=g6151.t1.exon3;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 9773 10057 . + 0 ID=cds.g6151.t1;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 10342 10470 . + . ID=g6151.t1.exon4;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 10342 10470 . + 0 ID=cds.g6151.t1;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 10677 10874 . + . ID=g6151.t1.exon5;Parent=g6151.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 10677 10874 . + 0 ID=cds.g6151.t1;Parent=g6151.t1 #PROT g6151.t1 g6151 MATITDDALRGRIETIVASADLSTMTIKTVRAALEDALGVDLTDRRAFIRATVDELLDALQGEPEDEIHNDQEMKEEGDNGDEDAPASASDSDEIEDDGKDAKRTVKGKKAKVEKSAKKEGGKGGFSGQLLELSPELASLVHAKAMSRTQVVKSIWEHIRAHDLQDPKDRRYFFCDAPLMAVFGEKRMHAFGMNKFLSAHFVGGSAKPKPQAASVTSKTKNGSTKNGSAAPKSSSKRKREEEEEARKRARGKTGRTGKIKSTEYVHSGSEGSDGDDVGDGGDLSDEALARKLQDEERGLRRRSGDTKRKKPSAKKSADGEKKRGGGGNSGLNKPLMLSEKLAGLVGCAE # ORIGINAL: g6148.t1 original gene structure, not modified by PASA NODE_1493_length_10959_cov_40.0277 AUGUSTUS gene 97 901 . + . ID=g6148;Name=g6148.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS mRNA 97 901 . + . ID=g6148.t1;Parent=g6148;Name=g6148.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 97 226 . + . ID=g6148.t1.exon1;Parent=g6148.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 97 226 . + 0 ID=cds.g6148.t1;Parent=g6148.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS exon 384 901 . + . ID=g6148.t1.exon2;Parent=g6148.t1 NODE_1493_length_10959_cov_40.0277 AUGUSTUS CDS 384 901 . + 2 ID=cds.g6148.t1;Parent=g6148.t1 #PROT g6148.t1 g6148 LHTPVMSWQQNNYMPTHVEMPPEEPVVQLVTSGPRARAIDTFLGESEEELSFAKDEWIRLLSRVNPDWLQGDMPDGRVGMFPQAFVEIVEYLPGENAPAIAHTVAVAHATSTPASSGMAVHPLEVGMEMHPLERMMLEDTKKSATSAAPAKKGLCKATAVYDFDAAGDGELTFRTGDTVHIMSRVNDDWLSGELDSGAAGIFPQGFVELEAGASV* # PASA_UPDATE: g6149.t1, single gene model update, valid-1, status:[pasa:asmbl_1762,status:3], valid-1 NODE_1493_length_10959_cov_40.0277 . gene 1308 4527 . - . ID=g6149;Name=g6149.t1 NODE_1493_length_10959_cov_40.0277 . mRNA 1308 4527 . - . ID=g6149.t1;Parent=g6149;Name=g6149.t1 NODE_1493_length_10959_cov_40.0277 . five_prime_UTR 4448 4527 . - . ID=g6149.t1.utr5p1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 4339 4527 . - . ID=g6149.t1.exon1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 4339 4447 . - 0 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 3901 4039 . - . ID=g6149.t1.exon2;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 3901 4039 . - 2 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 3404 3546 . - . ID=g6149.t1.exon3;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 3404 3546 . - 1 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 2919 3100 . - . ID=g6149.t1.exon4;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 2919 3100 . - 2 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 2629 2701 . - . ID=g6149.t1.exon5;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 2629 2701 . - 0 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 2158 2324 . - . ID=g6149.t1.exon6;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 2158 2324 . - 2 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . exon 1308 1793 . - . ID=g6149.t1.exon7;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . CDS 1458 1793 . - 0 ID=cds.g6149.t1;Parent=g6149.t1 NODE_1493_length_10959_cov_40.0277 . three_prime_UTR 1308 1457 . - . ID=g6149.t1.utr3p1;Parent=g6149.t1 #PROT g6149.t1 g6149 MRASVAILILAIAAVPLTLPPLNRVVYHFYSNTWPPARAEKIIGIGQGLPQMWYTQAALKLGLFEHLYKNGPLDEAAIAAGLGLSPRGVRKLCDALVALDILQTSWDGSAYDLTGAARTHLVKEAGDDYLGGYIELLGGIGNIFVDNNNTVEAVRQGSSQLATHAETKDHPFWEHFAKVTSEFMAPAAKATVNLAKTKGVSTSGKIRVLDVAAGSGAFGLAFARAFPNAEVVFADYEPVVKIIREKVETTDKDVAGRVKFIGGDLFDVNLEAHGAFDVVLAPNIYHHFSVERAVELTHKLADTSTQDALLIVVEFISPEGRPTILDNPTPSMFSMLMMLWTKAGEAFSFSSYQNILTTGGFGRGIEMHKQYPYPFSLVSARK* # ORIGINAL: g1446.t1 original gene structure, not modified by PASA NODE_631_length_19940_cov_41.5196 AUGUSTUS gene 251 3520 . - . ID=g1446;Name=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS mRNA 251 3520 . - . ID=g1446.t1;Parent=g1446;Name=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 3512 3520 . - . ID=g1446.t1.exon1;Parent=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 3512 3520 . - 0 ID=cds.g1446.t1;Parent=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 3090 3314 . - . ID=g1446.t1.exon2;Parent=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 3090 3314 . - 0 ID=cds.g1446.t1;Parent=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 251 2848 . - . ID=g1446.t1.exon3;Parent=g1446.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 251 2848 . - 0 ID=cds.g1446.t1;Parent=g1446.t1 #PROT g1446.t1 g1446 MAAPKETSVMGSMMEKWKNRTWFLSDEEANRLRLTKSREVLMGRVATSVRGLQTSAGTGEHVDGRNAHLVDLCAALEEVFVHGLKGVNDEPAAAYSRCWRFLQRLRRIVPSSAPLFDRVLASFPTESQETPQSSCSATQTQTAESATASASASLNNANSSQQAQMPSMPSSPSSPLLVDISAPHRAMLSQWIRFAVCERKVAGYVEKLLADGTVDTSVYEKEAFLSCDPESHELVRSLTGLSTVRLSMDVATSGVWGDEDPSEDAAAATDAAAAAGNEREARTSSLRSESSVDFSRYLDKGRDEDELSGDALGASMSSSTDGLGMDRINGLRSRSDSAALSVSPGIPGVPANTPADGFLEKSWAKNINALFDVGKPKPRASNASATSVGGLWDRLFDRVSEKDKGKDAKEEAAEALSMERRESGDAHNSSVSGLRSASASAVATSAKPILNRMQSSDADAHVTLFVKSSVCRHVDAEVAACCEHLNVAASPAYPHLSASAMSDSPRSRAGSAPRSPSLSRSASNAGTLLHSHALAHLASHPRPSRTGSVDSPSALASGLQSRASGASSVSSDGLFLSPEAGGASCNSRCVTDTRPRWAFPVSDHDGPNIRHTQGPLTLVDRGSEAGGVFLCWHPRSVTTLAEPADALPESSDSLNLEIPLSAVESIRAVVTSQSADSGCVEFRLAVDGKANEDGGMTHGSEGGRSPDSLQGRAETPRYVVLHFHRGGTRRFVRRLKANIRLVRSSCDPHTFNALREESVLDKGKSATAESESLFSQFMSKLKIGDFAKQKSGSISEASPSKTMSQPDDRPAVDAGTTAETSGTNGATGRRASLGAASEDDGDEYPAYNPSGRTTPYRALVNAAALAKLSDDSLPSPIGWEEWHSSLVDDEGRVHDMPHVMREIYRRGIMRRLRREVWPLVLGVFPPESTRTEREEALVGLREK* # ORIGINAL: g1451.t1 original gene structure, not modified by PASA NODE_631_length_19940_cov_41.5196 AUGUSTUS gene 16198 17506 . + . ID=g1451;Name=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS mRNA 16198 17506 . + . ID=g1451.t1;Parent=g1451;Name=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 16198 16355 . + . ID=g1451.t1.exon1;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 16198 16355 . + 0 ID=cds.g1451.t1;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 16451 16586 . + . ID=g1451.t1.exon2;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 16451 16586 . + 1 ID=cds.g1451.t1;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 16758 16854 . + . ID=g1451.t1.exon3;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 16758 16854 . + 0 ID=cds.g1451.t1;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 17265 17506 . + . ID=g1451.t1.exon4;Parent=g1451.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 17265 17506 . + 2 ID=cds.g1451.t1;Parent=g1451.t1 #PROT g1451.t1 g1451 MGDPATEQLTELRVRCSDSSAQEQPPTGIIFRGVTPGDRDEIERLHVEWFPLRYNATFFDLVVSSSKYYVVVAADQVTGVIAGLIIAEAISETKTDVEDADILQARLFEEQFLMYILTLGTRHSHRCRGIASALIANLFANVRLMRQPESRCVYLHVLANNDAAKRFYERHGFRRHAKLPGYYMFDGRTADAYTYVTYVNGGRPPWRNVW* # PASA_UPDATE: g1448.t1, single gene model update, valid-1, status:[pasa:asmbl_8583,status:3], valid-1 NODE_631_length_19940_cov_41.5196 . gene 6372 9065 . - . ID=g1448;Name=g1448.t1 NODE_631_length_19940_cov_41.5196 . mRNA 6372 9065 . - . ID=g1448.t1;Parent=g1448;Name=g1448.t1 NODE_631_length_19940_cov_41.5196 . five_prime_UTR 8818 9065 . - . ID=g1448.t1.utr5p1;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . exon 8683 9065 . - . ID=g1448.t1.exon1;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . CDS 8683 8817 . - 0 ID=cds.g1448.t1;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . exon 6984 8375 . - . ID=g1448.t1.exon2;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . CDS 6984 8375 . - 0 ID=cds.g1448.t1;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . exon 6372 6798 . - . ID=g1448.t1.exon3;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . CDS 6616 6798 . - 0 ID=cds.g1448.t1;Parent=g1448.t1 NODE_631_length_19940_cov_41.5196 . three_prime_UTR 6372 6615 . - . ID=g1448.t1.utr3p1;Parent=g1448.t1 #PROT g1448.t1 g1448 MSRSVKDLRDMICASRLSSRHPNGFVAGSDDDDDDDDDVVQSPIVTVTRPPSSQQMRPSTARPFSRVGSRAGQFSRIDGSLNDAVLPFCDARIISGLLRESNTEVRKLQVWWGERPDDVALFHEFVISEWSDERRAEFGNMQLARVKEDVAAAFVVGMDAGRVCEDDLNRLAKNVFHEYPDSFEGASGRETLLDLIDGVASGKGERFKHLLSDVRSSAANSEFAQWLLAMRSYFLVSFSSSVIKFYRTVYRERREECRRRKRERKEKQLRRMAEREKERQYLRSKSRRRGGGDDEDDDDGRGAAPDTTESSSETEMDERDLIDVSSESSNDVDSDAESATPGPGGNRSGSGRSSTHPSSASSSASSSGRDSRAAFTVRDRPGSVMRSSNPFPDSNRAPIAFSAARLGLVGTIGFLVPRRVPTDARDEQGKSLLATAIAAKRSACVTALLLRCRCDVNESIGEAGNTPLHVAATVGDAAIAQMLMENGAAINARSHGGEGPTPLHCAVMQGHKSVVALLVQWGADSHAVMGGEDGMTSIELAKQAQRYDIVEMLRVAGGSDSDEEQDNDD* # PASA_UPDATE: g1450.t1, single gene model update, valid-1, status:[pasa:asmbl_8584,status:3], valid-1 NODE_631_length_19940_cov_41.5196 . gene 12726 15428 . - . ID=g1450;Name=g1450.t1 NODE_631_length_19940_cov_41.5196 . mRNA 12726 15428 . - . ID=g1450.t1;Parent=g1450;Name=g1450.t1 NODE_631_length_19940_cov_41.5196 . five_prime_UTR 15325 15428 . - . ID=g1450.t1.utr5p1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . exon 15220 15428 . - . ID=g1450.t1.exon1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . CDS 15220 15324 . - 0 ID=cds.g1450.t1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . exon 14580 14868 . - . ID=g1450.t1.exon2;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . CDS 14580 14868 . - 0 ID=cds.g1450.t1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . exon 14160 14254 . - . ID=g1450.t1.exon3;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . CDS 14160 14254 . - 2 ID=cds.g1450.t1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . exon 13524 13894 . - . ID=g1450.t1.exon4;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . CDS 13524 13894 . - 0 ID=cds.g1450.t1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . exon 12726 13323 . - . ID=g1450.t1.exon5;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . CDS 13251 13323 . - 1 ID=cds.g1450.t1;Parent=g1450.t1 NODE_631_length_19940_cov_41.5196 . three_prime_UTR 12726 13250 . - . ID=g1450.t1.utr3p1;Parent=g1450.t1 #PROT g1450.t1 g1450 MSVVTEHVKQLDAWVEQLYQCKQLSEAQVKQLCEKAREILQEESNVQPVRCPVTVCGDVHGQFHDLMELFRIGGKAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRFRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDFLPLTALVENQIFCLHGGLSPSIDTLDHIRSLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEAFNHNNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDNLKYTFLQFDPAPRRGEPHVTRRTPDYFL* # PASA_UPDATE: g1449.t1, single gene model update, valid-1, status:[pasa:asmbl_8586,status:12], valid-1 NODE_631_length_19940_cov_41.5196 . gene 9656 12135 . + . ID=g1449;Name=g1449.t1 NODE_631_length_19940_cov_41.5196 . mRNA 9656 12135 . + . ID=g1449.t1;Parent=g1449;Name=g1449.t1 NODE_631_length_19940_cov_41.5196 . five_prime_UTR 9656 9696 . + . ID=g1449.t1.utr5p1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . exon 9656 9994 . + . ID=g1449.t1.exon1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . CDS 9697 9994 . + 0 ID=cds.g1449.t1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . exon 10202 10523 . + . ID=g1449.t1.exon2;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . CDS 10202 10523 . + 2 ID=cds.g1449.t1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . exon 10769 11351 . + . ID=g1449.t1.exon3;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . CDS 10769 11351 . + 1 ID=cds.g1449.t1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . exon 11600 12135 . + . ID=g1449.t1.exon4;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . CDS 11600 11644 . + 0 ID=cds.g1449.t1;Parent=g1449.t1 NODE_631_length_19940_cov_41.5196 . three_prime_UTR 11645 12135 . + . ID=g1449.t1.utr3p1;Parent=g1449.t1 #PROT g1449.t1 g1449 MGKKKKKSQKEELPWCWYCDREFETEEVLINHQKAKHFKCHLCNKRLFTASGMVTHCRTVHKEEVRKVPNALPGRESVDYEIFGMEGIPEEDLIAHLHQDEPQTKKQKTEAAAAAAAAANGGGAAVQAAYAGQPQAQQYGMPSMQQGYPQGGYPPQYGQPPPQQSPYGQPPQQQPPYGQPGQYPPPQQQPYGYPPQQQQQQQYGQQGPYARPPGPYGGPPPNQGYPPNQPPPHIQQPPWRPGMPPPNGAPPRPGGFPPGQQPPPFHHGGPPPMGGSMGPGPRGPPQPLFPAGAPQSQPPRPAFPAYAPQGPPPQRPPYAAQPSLQQQQQFQQQQQQQQPQPHQQVAPPPAVISGAPVASAPVLSVKAAPTVVDASIAAGRHSHSVNTAEGLLLYGDENSSVEEHRALHERYRTVG* # PASA_UPDATE: g1452.t1, single gene model update, valid-1, status:[pasa:asmbl_8585,status:12], valid-1 NODE_631_length_19940_cov_41.5196 . gene 18287 19909 . - . ID=g1452;Name=g1452.t1 NODE_631_length_19940_cov_41.5196 . mRNA 18287 19909 . - . ID=g1452.t1;Parent=g1452;Name=g1452.t1 NODE_631_length_19940_cov_41.5196 . exon 19809 19909 . - . ID=g1452.t1.exon1;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . CDS 19809 19909 . - 0 ID=cds.g1452.t1;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . exon 19173 19556 . - . ID=g1452.t1.exon2;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . CDS 19173 19556 . - 1 ID=cds.g1452.t1;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . exon 18829 18954 . - . ID=g1452.t1.exon3;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . CDS 18829 18954 . - 1 ID=cds.g1452.t1;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . exon 18287 18630 . - . ID=g1452.t1.exon4;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . CDS 18450 18630 . - 1 ID=cds.g1452.t1;Parent=g1452.t1 NODE_631_length_19940_cov_41.5196 . three_prime_UTR 18287 18449 . - . ID=g1452.t1.utr3p1;Parent=g1452.t1 #PROT g1452.t1 g1452 MYTIYTLHAYALQVPYDMQMTRTSERPLVRASISLLHARLAALVAGIVGPLILLTQVNGVTAGLGLANIILYGFIYTPMKRTTIHNTAVGAIVGAIPPLMGCAARTGSITDPSGIYLGFLLFGWQFPHFNALSWMQRDQYAKAGYKMMAVSHPQLTRKLALGTCAVVTASSFLPPLLDLTTWAFAPVSLVANSVYLYGALKFYRSFDIKPAQSFYAMSKWYLPVVLVAALACKKTTKTVHSAGAGSPAEGESVVAVASPTSTT* # ORIGINAL: g1447.t1 original gene structure, not modified by PASA NODE_631_length_19940_cov_41.5196 AUGUSTUS gene 5189 6098 . + . ID=g1447;Name=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS mRNA 5189 6098 . + . ID=g1447.t1;Parent=g1447;Name=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 5189 5266 . + . ID=g1447.t1.exon1;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 5189 5266 . + 0 ID=cds.g1447.t1;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 5412 5485 . + . ID=g1447.t1.exon2;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 5412 5485 . + 0 ID=cds.g1447.t1;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 5646 5777 . + . ID=g1447.t1.exon3;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 5646 5777 . + 1 ID=cds.g1447.t1;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS exon 6008 6098 . + . ID=g1447.t1.exon4;Parent=g1447.t1 NODE_631_length_19940_cov_41.5196 AUGUSTUS CDS 6008 6098 . + 1 ID=cds.g1447.t1;Parent=g1447.t1 #PROT g1447.t1 g1447 MASLITFKNMCLATAVSNAFCGPQFLYPGTYYETESPDTSDTIRFLGTSNLVSAMGASGLFYVLANCENPLLQSSIAKVAAGCALATTATFMLYRDRKAIRNPEYQIMLTVPFFLGWAKVALMG* # ORIGINAL: g2700.t1 original gene structure, not modified by PASA NODE_18779_length_171_cov_29.6667_potentialcontaminant AUGUSTUS gene 1 171 . - . ID=g2700;Name=g2700.t1 NODE_18779_length_171_cov_29.6667_potentialcontaminant AUGUSTUS mRNA 1 171 . - . ID=g2700.t1;Parent=g2700;Name=g2700.t1 NODE_18779_length_171_cov_29.6667_potentialcontaminant AUGUSTUS exon 1 171 . - . ID=g2700.t1.exon1;Parent=g2700.t1 NODE_18779_length_171_cov_29.6667_potentialcontaminant AUGUSTUS CDS 1 171 . - 1 ID=cds.g2700.t1;Parent=g2700.t1 #PROT g2700.t1 g2700 SFALELYDAYDVLAKSGGSNYEIKAELKAVTAPTVRPQDPALELRGSEARNLDGGK # PASA_UPDATE: g6208.t1, single gene model update, valid-1, status:[pasa:asmbl_4963,status:3], valid-1 NODE_2766_length_5176_cov_37.0958 . gene 993 3864 . - . ID=g6208;Name=g6208.t1 NODE_2766_length_5176_cov_37.0958 . mRNA 993 3864 . - . ID=g6208.t1;Parent=g6208;Name=g6208.t1 NODE_2766_length_5176_cov_37.0958 . five_prime_UTR 3747 3864 . - . ID=g6208.t1.utr5p1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 3704 3864 . - . ID=g6208.t1.exon1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 3704 3746 . - 0 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 3481 3550 . - . ID=g6208.t1.exon2;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 3481 3550 . - 2 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 3274 3314 . - . ID=g6208.t1.exon3;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 3274 3314 . - 1 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 2515 2993 . - . ID=g6208.t1.exon4;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 2515 2993 . - 2 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 2077 2253 . - . ID=g6208.t1.exon5;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 2077 2253 . - 0 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 1418 1799 . - . ID=g6208.t1.exon6;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 1418 1799 . - 0 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . exon 993 1229 . - . ID=g6208.t1.exon7;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . CDS 1084 1229 . - 2 ID=cds.g6208.t1;Parent=g6208.t1 NODE_2766_length_5176_cov_37.0958 . three_prime_UTR 993 1083 . - . ID=g6208.t1.utr3p1;Parent=g6208.t1 #PROT g6208.t1 g6208 MAAVRCWTAAAFKHVTRPLCLPPSPRLLCLRRLTATAVSDYSVDSNVAASEGPLSGIRVVDLTRVLAGPFCTMQLGDLGADVIKIELPQTGDDTRAWGPPFVHGESAYFLCVNRNKRSITVNLKSPEGVQIVRDLVAKSDVLVENYLPGKLASMGLGYETLSKVNPKLVYCSITGYGPTGPYKDRAGYDVIAAGMGGLMHITGPEDGSPVKVGVAITDMATGLYAHGAIMAALFARTRTGKGQKIDCSLLETQIAVLANIGSNYLIAGSESRRWGSAHESIVPYSGFPTSDGHVIVGAVNNRQFVALCDLLGMPHLSKDPRYIENRDRVKHRKELTATLDAAFRKHTTEEWLGRLRRSGLAHGPINTVAQAHNDPQVLHREMVREIEHPTAGSIKVAGIPVKYSETKPTIRRPPPLLGQHTDEVLASVTGYDAARIAHLHKAGAV* # ORIGINAL: g6207.t1 original gene structure, not modified by PASA NODE_2766_length_5176_cov_37.0958 AUGUSTUS gene 158 511 . + . ID=g6207;Name=g6207.t1 NODE_2766_length_5176_cov_37.0958 AUGUSTUS mRNA 158 511 . + . ID=g6207.t1;Parent=g6207;Name=g6207.t1 NODE_2766_length_5176_cov_37.0958 AUGUSTUS exon 158 303 . + . ID=g6207.t1.exon1;Parent=g6207.t1 NODE_2766_length_5176_cov_37.0958 AUGUSTUS CDS 158 303 . + 0 ID=cds.g6207.t1;Parent=g6207.t1 NODE_2766_length_5176_cov_37.0958 AUGUSTUS exon 469 511 . + . ID=g6207.t1.exon2;Parent=g6207.t1 NODE_2766_length_5176_cov_37.0958 AUGUSTUS CDS 469 511 . + 1 ID=cds.g6207.t1;Parent=g6207.t1 #PROT g6207.t1 g6207 VSRYLTPDEFARWGKVGDELGFMYTASGPLVRSSYRAGEFFIKKILDERKGSATKSETLSSV* # ORIGINAL: g2793.t1 original gene structure, not modified by PASA NODE_4667_length_1353_cov_32.705_potentialcontaminant AUGUSTUS gene 456 1307 . + . ID=g2793;Name=g2793.t1 NODE_4667_length_1353_cov_32.705_potentialcontaminant AUGUSTUS mRNA 456 1307 . + . ID=g2793.t1;Parent=g2793;Name=g2793.t1 NODE_4667_length_1353_cov_32.705_potentialcontaminant AUGUSTUS exon 456 1307 . + . ID=g2793.t1.exon1;Parent=g2793.t1 NODE_4667_length_1353_cov_32.705_potentialcontaminant AUGUSTUS CDS 456 1307 . + 0 ID=cds.g2793.t1;Parent=g2793.t1 #PROT g2793.t1 g2793 MCENGRSLFSVPIEVVERHLLPYLSNKDRASLAGVNSRLRCVLRHVRLYTLRDDFPQLYWASDAFRNAVCADIPRERLVLNLNAQASDLDVSVLSGVHSVDLRNCLRVTDVSALGNVHTLNISGCEGVTDVSALGGVHSLDLTRCTGVTDVSALGGVHSLSLACCNGQKYLFVFRGATPVNLLNHRGVTDVSSLGGVHLLNLSHCYGLTDVSSLGGVHSLNLSHCYGLTDVSALGGVHSLDLSYCRGLKDVSSLGGVRSLNLSNCKRVTNVSGSRPLTRSLLL* # ORIGINAL: g9855.t1 original gene structure, not modified by PASA NODE_3529_length_3266_cov_41.0984 AUGUSTUS gene 80 2820 . - . ID=g9855;Name=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS mRNA 80 2820 . - . ID=g9855.t1;Parent=g9855;Name=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 2716 2820 . - . ID=g9855.t1.exon1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 2716 2820 . - 0 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 2353 2486 . - . ID=g9855.t1.exon2;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 2353 2486 . - 0 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 1864 1957 . - . ID=g9855.t1.exon3;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 1864 1957 . - 1 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 1613 1689 . - . ID=g9855.t1.exon4;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 1613 1689 . - 0 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 966 1463 . - . ID=g9855.t1.exon5;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 966 1463 . - 1 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 755 857 . - . ID=g9855.t1.exon6;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 755 857 . - 1 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 475 570 . - . ID=g9855.t1.exon7;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 475 570 . - 0 ID=cds.g9855.t1;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS exon 80 289 . - . ID=g9855.t1.exon8;Parent=g9855.t1 NODE_3529_length_3266_cov_41.0984 AUGUSTUS CDS 80 289 . - 0 ID=cds.g9855.t1;Parent=g9855.t1 #PROT g9855.t1 g9855 TQLSEHDAELQSLKQSLADTQPVGSLVAAARTIDQARAILTFVEAISEKTLRSTVALTASRGRGKSAALGIAISAAVAYGYSNVFVTSPSPENLKTLFEFVFKGFDALEYKEHLDYELVQSTNPDFNKAIVRVNIFRHHRQTIQYIQPQDAHKLGQAELVVIDEAAAIPLPFVKALLGPYLVFMASTINGYEGTGRSLSLKLIQQLRKQSAPSASGTAGTPGTGSGDAGANAPTAGAGSQGTGGVSGRVLREIVLEEPIRYARGDSVEQWLNSLLCLDASIVPRSIGSGCPHPSQCELYYINRDTLFSYHTASETFLQRLMALYVSSHYKNTPNDLQLMSDAPAHHLFCLLGPVNPANPTLPEILCVVQVCLEGEISRETMMRSLSRGQRASGDLIPWTISQQFQDNDFGSLSGARVVRIATHPDYAGMGYGSRALDLL # PASA_UPDATE: g14347.t1, single gene model update, valid-1, status:[pasa:asmbl_6924,status:12], valid-1 NODE_4071_length_2239_cov_42.073 . gene 318 2078 . - . ID=g14347;Name=g14347.t1 NODE_4071_length_2239_cov_42.073 . mRNA 318 2078 . - . ID=g14347.t1;Parent=g14347;Name=g14347.t1 NODE_4071_length_2239_cov_42.073 . five_prime_UTR 2014 2078 . - . ID=g14347.t1.utr5p1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . exon 1949 2078 . - . ID=g14347.t1.exon1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . CDS 1949 2013 . - 0 ID=cds.g14347.t1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . exon 1530 1635 . - . ID=g14347.t1.exon2;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . CDS 1530 1635 . - 1 ID=cds.g14347.t1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . exon 1154 1323 . - . ID=g14347.t1.exon3;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . CDS 1154 1323 . - 0 ID=cds.g14347.t1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . exon 709 806 . - . ID=g14347.t1.exon4;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . CDS 709 806 . - 1 ID=cds.g14347.t1;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . exon 318 486 . - . ID=g14347.t1.exon5;Parent=g14347.t1 NODE_4071_length_2239_cov_42.073 . CDS 318 486 . - 2 ID=cds.g14347.t1;Parent=g14347.t1;3_prime_partial=true #PROT g14347.t1 g14347 MDTFFTNRPHPSMRSLKDFSPLSSSVRSHLINVYATLTVGMFIASFGVIANIYYGINLGILTFFATIGFLIALASTPASPDNSFFRASLFGAICLTQGLSLGPLIDLVLYNDPAILVNALVGTSLVFASFTASALLSPRRDYIFLGGILSSALSVMFWLSIFNIFVGSLGIFNVQLYLGLFVMCGFVLYDTQLIVEKASRGD # ORIGINAL: g9270.t1 original gene structure, not modified by PASA NODE_1323_length_12112_cov_41.926 AUGUSTUS gene 2631 8810 . + . ID=g9270;Name=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS mRNA 2631 8810 . + . ID=g9270.t1;Parent=g9270;Name=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 2631 3059 . + . ID=g9270.t1.exon1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 2631 3059 . + 0 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 3411 5202 . + . ID=g9270.t1.exon2;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 3411 5202 . + 0 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 5502 6038 . + . ID=g9270.t1.exon3;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 5502 6038 . + 2 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 6389 7404 . + . ID=g9270.t1.exon4;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 6389 7404 . + 2 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 7774 8087 . + . ID=g9270.t1.exon5;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 7774 8087 . + 0 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 8242 8380 . + . ID=g9270.t1.exon6;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 8242 8380 . + 1 ID=cds.g9270.t1;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 8676 8810 . + . ID=g9270.t1.exon7;Parent=g9270.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 8676 8810 . + 0 ID=cds.g9270.t1;Parent=g9270.t1 #PROT g9270.t1 g9270 MEGNVRGSAVPKTTTGGGSSSESESQQTIRVSSNGGADVIMDSTLSGSNGLTVGSGSLELSVTPGTKKRLRAPANPALDAVFNSVFESDKTAVPVSPVVNRSVGPAQGSSAASGGSGSGSKGKGEGQQATGDDAESNTSERYMSQKSRADDTTSNGSSSRSVSIAGQNAKFVNGGILANMLIKGAASNNQDAPKVSVVAPKTRILDNFLSQRRFETEDCQEVAQLVRAMMARANATGAQFPLPGPGQDRGQQQQQQQQQQQQHGLTVPHTHTASLNNGAMESPSIAITVEDLSSHGIDLKALMAQVEQNRLKRRAALEQLPIGWWMCALALIVPVRLKGPAKTMFLAYRLFLFLMNWVTCGFATARFFETSIHASDANVANATFSMWLVSLSIAFTYTIFLLSRPTDFFERLANFMGDPQIFFASLRNRRLSMYASLCLPVISAASLWTVSLYEATHGGGGVLPYFTDHPWYGAIHSWPVNVIALVFVVVACTIQAVVLEYLLLVFHSMSRLSKSVAKAVRAIDVTASQLRTTARSKGSSSFIESSGRVEMFRDSYLRGEFYELSSAILKSTRWPTLAMMILLFSVSVVCLTGLSTRSGSDWPYAFLYMIGLMCFAHVPTALSRADSKVRNGKRRLKAELREILAEVPSAEIFVQAAELVDLPGQYAGMSMATLSGEDSSLMTSPSAHRRSERTPSPIHMVHTIDTPIIEESVLPGAVVEAEDVTEAGRDARSLRVGVQEARPESAGKHVRSSVRFDSDAPDAAVDGAEVPLLKKVVEDEIQQYREMAAVAEETVPSSEISNYFSVVEAAKRNSYAALVHKRRQSLTPKDPNAPPANTGGVRRLSLFRRTSGFAIPEYGAAPPTPSHATTPLQYHQGLTPLHAATSTNPFFPTSSSAGNSISGRPDSTTAWGAPANSDMGSHRGSIFQGKLARASLLLGLGSMSALLSSGQRGRGNSLGMNSLGAGSLGVHSLGDHSLGASSLGVNSLGIPHAAARRSSVFQFVNKVKSDLSLFVERKIGPREIPKVATERVTKRTALMTMASLYGVAMHIILIAIVYIKMFTALPWQVPCSEGSTDVCRNPYTSFIAGRLGFVLTVHFVTLSAGLVCFPRIWKQLTCRALAPTFVSVGIVCILFAADIWADYVVSVTFFFAGLQLYDTFKQAVAHKTKTHFEETNGSIGFLTAVLAIGILIVAAYCRFAIKAILGKSFGSLLAFRVCVHPVVAAFVSRLLEIGIERMGSVPSSVGYVYWYWATLVMGTVGRLMMYQSTSIYEALAMNLFIGFLEYVFRRTFHLRRELLARLAKFLRLHVSESIVALVFGQLPKDADESKRMEARELEVYASALNVLTMVKVQSSILALVVSKAFVRLQPCYELKGGGDEATDIVNLILMLVIGYAIDFVSTIWEQGQRIDVVGDIHRRPMIRSYVYLGATVLILVHLVDFSFINDCPVRERG* # ORIGINAL: g9272.t1 original gene structure, not modified by PASA NODE_1323_length_12112_cov_41.926 AUGUSTUS gene 10948 12011 . - . ID=g9272;Name=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS mRNA 10948 12011 . - . ID=g9272.t1;Parent=g9272;Name=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 11818 12011 . - . ID=g9272.t1.exon1;Parent=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 11818 12011 . - 0 ID=cds.g9272.t1;Parent=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 11489 11649 . - . ID=g9272.t1.exon2;Parent=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 11489 11649 . - 1 ID=cds.g9272.t1;Parent=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 10948 11159 . - . ID=g9272.t1.exon3;Parent=g9272.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 10948 11159 . - 2 ID=cds.g9272.t1;Parent=g9272.t1 #PROT g9272.t1 g9272 MLSDWYEEWAVLRNEQSQVLIGVLVGLNAVDFGLCLRGLDLDAPDYPIDYAFFLEAPRRRLHVNTPSAAVDDCGGLIRDMSIQPSADEEMMRRMTSLHEQKAYLEELVRSKEMALEASARVDALVQQLSDERHQAHEIILELQRQVGQNTEARRIGVSGQGSAGSGSSSYGDRTRHTFERLPDSVLGL* # ORIGINAL: g9271.t1 original gene structure, not modified by PASA NODE_1323_length_12112_cov_41.926 AUGUSTUS gene 9754 10548 . + . ID=g9271;Name=g9271.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS mRNA 9754 10548 . + . ID=g9271.t1;Parent=g9271;Name=g9271.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 9754 9829 . + . ID=g9271.t1.exon1;Parent=g9271.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 9754 9829 . + 0 ID=cds.g9271.t1;Parent=g9271.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 10043 10548 . + . ID=g9271.t1.exon2;Parent=g9271.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 10043 10548 . + 2 ID=cds.g9271.t1;Parent=g9271.t1 #PROT g9271.t1 g9271 MAASGASTSRTGRPRTSTTCVPMVQDANNRRKQYAYPPAGRVDGDPKKRMCLVVNCAKVLSDQSAYNKHYRIHDQASFRPLKCDICGQEFSQTPQMSRHTKYRRCDNPSWLRLFSEEVDSSNFDADLSSVAESECGSADNDATVPVESMPNQNCSIHANQHSDLSIFEDCEDCKDCDTLADSTADTWVDEVLE* # ORIGINAL: g9269.t1 original gene structure, not modified by PASA NODE_1323_length_12112_cov_41.926 AUGUSTUS gene 2 1673 . + . ID=g9269;Name=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS mRNA 2 1673 . + . ID=g9269.t1;Parent=g9269;Name=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 2 324 . + . ID=g9269.t1.exon1;Parent=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 2 324 . + 2 ID=cds.g9269.t1;Parent=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 639 925 . + . ID=g9269.t1.exon2;Parent=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 639 925 . + 0 ID=cds.g9269.t1;Parent=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS exon 1214 1673 . + . ID=g9269.t1.exon3;Parent=g9269.t1 NODE_1323_length_12112_cov_41.926 AUGUSTUS CDS 1214 1673 . + 1 ID=cds.g9269.t1;Parent=g9269.t1 #PROT g9269.t1 g9269 QQQQQQQQQQQQQQQQQQQQQQQQKQPQKQPEKQPEKQLPSRASASLSQPTTAEQATGRSAPVVGDGDLSSKTNKSAARKVAKTTYRPATIDAVHNDHAATIGVDSHQGTTHPLAHKEMCTACYEFWHKEDHAAWACDLETGDYFYCILCGEAAPAESNLRLYLCDGEQCKRGFHLKCTRSVFGAVEAEVMGVEGAEYKCPFWQANPPKAAAAFNLSEMNAAQASGVTFTTATRVPSTALRGTRKQSTGNGAPKTAGQSARSQKVTRKDTAAACTASEAHTTKQMKKKDAERAAMDWHSKLEAAQAAAHRCKRGLEGASSGEDLCTKVPRVGSASSPAAVSLGGGRRHSGRRAEN* # PASA_UPDATE: g10954.t1, single gene model update, valid-1, status:[pasa:asmbl_6585,status:12],[pasa:asmbl_6589,status:12],[pasa:asmbl_6590,status:12], valid-1 NODE_380_length_25336_cov_42.1638 . gene 186 6877 . + . ID=g10954;Name=g10954.t1 NODE_380_length_25336_cov_42.1638 . mRNA 186 6877 . + . ID=g10954.t1;Parent=g10954;Name=g10954.t1 NODE_380_length_25336_cov_42.1638 . five_prime_UTR 186 268 . + . ID=g10954.t1.utr5p1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 186 535 . + . ID=g10954.t1.exon1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 269 535 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 820 895 . + . ID=g10954.t1.exon2;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 820 895 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 1139 1320 . + . ID=g10954.t1.exon3;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 1139 1320 . + 2 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 1657 1776 . + . ID=g10954.t1.exon4;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 1657 1776 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 2030 2248 . + . ID=g10954.t1.exon5;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 2030 2248 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 2464 2695 . + . ID=g10954.t1.exon6;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 2464 2695 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 2834 3168 . + . ID=g10954.t1.exon7;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 2834 3168 . + 2 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 3354 4025 . + . ID=g10954.t1.exon8;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 3354 4025 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 4158 4205 . + . ID=g10954.t1.exon9;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 4158 4205 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 4483 4857 . + . ID=g10954.t1.exon10;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 4483 4857 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 5088 5163 . + . ID=g10954.t1.exon11;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 5088 5163 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 5379 5716 . + . ID=g10954.t1.exon12;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 5379 5716 . + 2 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 5855 5975 . + . ID=g10954.t1.exon13;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 5855 5975 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 6148 6407 . + . ID=g10954.t1.exon14;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 6148 6407 . + 2 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . exon 6631 6877 . + . ID=g10954.t1.exon15;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . CDS 6631 6723 . + 0 ID=cds.g10954.t1;Parent=g10954.t1 NODE_380_length_25336_cov_42.1638 . three_prime_UTR 6724 6877 . + . ID=g10954.t1.utr3p1;Parent=g10954.t1 #PROT g10954.t1 g10954 MARLQLVVIAVLAACMGAVLAAPPTFEPCPDNSQFLLAPPTDNGPQPCNGQGKIHARLFCSCNPGFFGKCCENSINFCDAYNGGCHEYATCNQVFGDRTCTCNEGFAGDGISCRDVTPPELTLKGDSTVMITQYAPYSDVGATSIDNLDGDISAHATASSTVNTHFPGTYTVEYSSTDAAGNMNGITRTVIVADIDECGLPADNPYHHACHAKASCANTNGGYTCTCNAGYIGDGKNCNDVTAPVITILSDSDVTLYQYDVFTVAGSTVKDNSGESIEATATSDVDVTTPGKYHVVYAARDSAGNQATATLTVDVYDIDECLVFQSNSKKIPSRPCHQYSKCTNTIGGYTCVCNGGFSGDGFNCIDITPPVVRTVVPIVTVAQYSDEAAIYTAFHVSSVDNLNGDLSDAVLRQGSADVKSPGEYSVVFSSTDVAGNTGLVSVKAIVSDVDECSEKTAWWKHNCNYYASCKNTIGSFECKCDDGFTGDGVRCNDVTSPVVELKGTSTVVIEQFGTYKDDGAIATDNKDGDVSSAISVSGSVNTGLAGDYELTFSATDAAGNVGSVTRLVSVQDINECTIAESNIHAAKCDKNAYCTNRKSAYDCICNDGFSGDGKTCQDVTPPVITPSSFEVHINQYDAFTVPAAKATDNYDGNISGKVRITFNNVNTALAGWYTVTYSVTDASGNDAQDKTIDVEVRDINECTRSDAYKHNCSPHGTCTNVISSFSCACNAGFSGNGVNCRDITPPVITVDTTPISIVQYASSFVVPSARASDNLDGDISAKIAVSNTVNARVVGSYSIRYDAVDASGNAATSARITVSVTDIDECARPNPALYPSCHAQADCRNTIGSYTCTCKTGFTGDGFRSCVDTTAPVITLTGPASITLTQAISWLPATPYVEQGATANDNFDGVINSRVAISGSVNVRVVGTYRINYDVTDLAGNAATRVTRTIIVQDVNECDTARSTADGLATTPAGCDRYTTCVNNVGGYSCTPCPAGFTGSGTTTCKSITCQYSEYWSDCLTWSVPTCNYGGSPVNPDACSGLIGALRDGSQSCGLGGCQVKCRIVTNAPCNCGYEEYWSSNCGIADLGLSSNSYARTCSDGGELVSQYSCYTIFNSWSQSCGILGCSSKCRRVVCQK* # ORIGINAL: g10959.t1 original gene structure, not modified by PASA NODE_380_length_25336_cov_42.1638 AUGUSTUS gene 23291 24649 . - . ID=g10959;Name=g10959.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS mRNA 23291 24649 . - . ID=g10959.t1;Parent=g10959;Name=g10959.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS exon 23291 24649 . - . ID=g10959.t1.exon1;Parent=g10959.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS CDS 23291 24649 . - 0 ID=cds.g10959.t1;Parent=g10959.t1 #PROT g10959.t1 g10959 MTVTTVDELRAAIKGDVFEGGSQSCVDRLIGTVVFQKVLLTKKPAYWVVAKQVPEDIQATLAFARAHKLPVNILATGHSAFSVADGAVILDLSQVKYHSVDAERRRIRFGPGLNLGDVVDATSPHGFQIPLGVISHTGVGLILGGGVGFLSRLYGVTADSIVSLKAVDGNGSLISTSRDENPDFLRAIKGAPGSFAAVYEFEMQGYDTPDPFVVVQHTGFDNVGRSAIRKVVDYIDRPESEAERRCTTYIALGYAPDGSKAVTFASVFSGPEAEGRAFLAPILGMEGVQASVCGIVPWVALVRALDPLMPAAYWYSTAAQITQWPNNDNLDKIIDAWISTTSDVGAVAIEQRGGKQKEGVDDMTTHRVTQRGDCVMFFGYNTPESMQETIPAIRAQKRALIAGGQLCDSTFTNYEGVEGLAASQVVDVSRLSDFKAKHDTDGVFRNSCPLRL* # PASA_UPDATE: g10957.t1, single gene model update, valid-1, status:[pasa:asmbl_6588,status:13],[pasa:asmbl_6591,status:12], valid-1 NODE_380_length_25336_cov_42.1638 . gene 15293 19764 . + . ID=g10957;Name=g10957.t1 NODE_380_length_25336_cov_42.1638 . mRNA 15293 19764 . + . ID=g10957.t1;Parent=g10957;Name=g10957.t1 NODE_380_length_25336_cov_42.1638 . five_prime_UTR 15293 15377 . + . ID=g10957.t1.utr5p1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 15293 15458 . + . ID=g10957.t1.exon1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 15378 15458 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 15644 15745 . + . ID=g10957.t1.exon2;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 15644 15745 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 16037 16208 . + . ID=g10957.t1.exon3;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 16037 16208 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 16675 16765 . + . ID=g10957.t1.exon4;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 16675 16765 . + 2 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 16938 17088 . + . ID=g10957.t1.exon5;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 16938 17088 . + 1 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 17400 17499 . + . ID=g10957.t1.exon6;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 17400 17499 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 17712 17842 . + . ID=g10957.t1.exon7;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 17712 17842 . + 2 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 18103 18181 . + . ID=g10957.t1.exon8;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 18103 18181 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 18471 18616 . + . ID=g10957.t1.exon9;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 18471 18616 . + 2 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . exon 18869 19764 . + . ID=g10957.t1.exon10;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . CDS 18869 19069 . + 0 ID=cds.g10957.t1;Parent=g10957.t1 NODE_380_length_25336_cov_42.1638 . three_prime_UTR 19070 19764 . + . ID=g10957.t1.utr3p1;Parent=g10957.t1 #PROT g10957.t1 g10957 MSFVNVPANSDFPIQNLPYGVFSTANDSTHRIGVAIGEHVLDVKRVAHLFNNQDIATAFAQPTLNAFMGLGKELWHSARTTLQRILSADEPTLRDNAELRAQAIIPMASATMHMPAQIGDYTDFYSSRDHATNVGIMFRGKENALMPNWLHLPVGYHGRASSIVVSGTPLVRPSGQLCPDETKPPVFGSCKLLDFELEMAFFMGPGNKLGDPIPVSEAHNHIFGMVIMNDWSARDIQKWEYVPLGPFLGKNFGTTVSPWVVTMEALAPFVVPNTPQDDPLPLPYLRHSDPFTFDVKLEVAIKPEGGSAAVVTRSNFKHMYWTMKQQLAHHTIGGCNMSPGDLLASGTISGPTPDSFGSMLELSWRGSKALTLTEGVTRKFIEDGDEVIMTGHCEKDGVRIGFGACVGKVLPARSFNF* # ORIGINAL: g10955.t1 original gene structure, not modified by PASA NODE_380_length_25336_cov_42.1638 AUGUSTUS gene 7894 10887 . + . ID=g10955;Name=g10955.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS mRNA 7894 10887 . + . ID=g10955.t1;Parent=g10955;Name=g10955.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS exon 7894 10887 . + . ID=g10955.t1.exon1;Parent=g10955.t1 NODE_380_length_25336_cov_42.1638 AUGUSTUS CDS 7894 10887 . + 0 ID=cds.g10955.t1;Parent=g10955.t1 #PROT g10955.t1 g10955 MAGDGDGGADVRMPVDALLRPPAPPTTSTGRKDALDMLKTPAGLFLDGNDCAGGAASTRYLVARPVLHELRNDDVFGKALLGRRWGAFYRVFRTPAFNIFGYIVWSVAVVWFGLFACYDSHYGVDGRIVTGLLTLLSTMYVVVWDLCITRTITKRLMRTFEFWFIAVQMLGFSFAMSWLWKWDYRITICLASMQLGLLHYLVADAMALGLRARVLERLLFAIIPLIVSYVALGMRVGSQYVEPTRLTVGDGYVDVRIVALDFCLNIIIFLSKYAATLFKDRRSVILIHGRFKLQRTPMGDEANVIKTEVIDKVEGSTSLASGVMSSLMRRAVNEYRPPKKVLSTVPSFSPEYALDDGNNAGSINVVSAVSEDSAVDGNLSHAGATNAMSATNVRPRSTRNAVAPLASSSGFMRDGVAEDSVESRGRLSQESGSSGDGQDKYLSDERAFFPPLTAIIAEAEVDPPTTTATVRFSGVVSTLPGIVAEDSPMAMAETSMVVDEQEGGGDHNTHSATATNAVGKEGTALALYEKISNRSLEHPRVETAPAPSTVARRRRYYLQSLAVEHKIDVTRTIGHALVGGQVTRRVWSIMRHKVISVLLSVAWFAGCILSCMAVSDMSVARHPAALVIAVLGICLHIVTITKSNLDIMRLIVRTFEFYFMMFENVGQVAAFVFYFQKDERIIYALFAATGTIMCTCFDAQSAKMRQSTKYAMLISMFAFVYTFIVIYLRLFDKQDISISISKNGVSFDVRLLLCNRIAVLAIFYAKYFYIAARDSSALLLIVAPCILTREITAEAAIHKSSHHQRRRASSAAAPSKHVPPTDGHGNVDLEAIAAGGGAAADGVTAGVTVAWGGDDDATDGHMSPRHVSVGVAPEVDDGACGDRFESAPSDIRSPKISREMSRASILFRRLSSVLSLPNNMDFGAGNGESAAGGRKASECERDAHVTRVTDDVYPESAGSDVADEVDWEAYEDAMAEARDVLEGRDEDDTTNVRQKKL* # PASA_UPDATE: g10958.t1, single gene model update, valid-1, status:[pasa:asmbl_6592,status:3], valid-1 NODE_380_length_25336_cov_42.1638 . gene 19959 23142 . + . ID=g10958;Name=g10958.t1 NODE_380_length_25336_cov_42.1638 . mRNA 19959 23142 . + . ID=g10958.t1;Parent=g10958;Name=g10958.t1 NODE_380_length_25336_cov_42.1638 . five_prime_UTR 19959 20019 . + . ID=g10958.t1.utr5p1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 19959 20050 . + . ID=g10958.t1.exon1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 20020 20050 . + 0 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 20300 20467 . + . ID=g10958.t1.exon2;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 20300 20467 . + 2 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 20610 20701 . + . ID=g10958.t1.exon3;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 20610 20701 . + 2 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 20888 21001 . + . ID=g10958.t1.exon4;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 20888 21001 . + 0 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 21439 21530 . + . ID=g10958.t1.exon5;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 21439 21530 . + 0 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 21781 21842 . + . ID=g10958.t1.exon6;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 21781 21842 . + 1 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 21998 22177 . + . ID=g10958.t1.exon7;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 21998 22177 . + 2 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 22361 22446 . + . ID=g10958.t1.exon8;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 22361 22446 . + 2 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . exon 22654 23142 . + . ID=g10958.t1.exon9;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . CDS 22654 22923 . + 0 ID=cds.g10958.t1;Parent=g10958.t1 NODE_380_length_25336_cov_42.1638 . three_prime_UTR 22924 23142 . + . ID=g10958.t1.utr3p1;Parent=g10958.t1 #PROT g10958.t1 g10958 MSKPRVLVLGGAGFIGRNLVVHLIENDLASKVRIVDKVLPQTAYLTKRQEEAFAKAEFKQGNLISPASIEKSFTDETGDYEYVFNCAAETKYGQTEQIYEERVYQLTVNCAKEAAKRKVKRFIEISTGQIYSGDKKHNTEEDKTDPWTLIAKSKLKAEQELAKIEGLNYVIVRPAVVYGVSDVLGITPRLIVGAVYKHLHETMKLLWTEKLRISTVHIEDVVRALWFVKDLGKNGEIYNLSDKADSTQDSISKIIAHIFGIKHDYLGSIMSNLAKVNMRGVTEEVNEKHMQPWSEMCKKDGIENTPLSPYLDQELLYNNALSLDGSKIEKAGFKYDHVEIDEATLRNVVKEYIALKAFPASYFS* # PASA_UPDATE: g10956.t1, single gene model update, valid-1, status:[pasa:asmbl_6586,status:12],[pasa:asmbl_6587,status:12], valid-1 NODE_380_length_25336_cov_42.1638 . gene 11490 14549 . - . ID=g10956;Name=g10956.t1 NODE_380_length_25336_cov_42.1638 . mRNA 11490 14549 . - . ID=g10956.t1;Parent=g10956;Name=g10956.t1 NODE_380_length_25336_cov_42.1638 . exon 12557 14549 . - . ID=g10956.t1.exon1;Parent=g10956.t1 NODE_380_length_25336_cov_42.1638 . CDS 12557 14549 . - 0 ID=cds.g10956.t1;Parent=g10956.t1 NODE_380_length_25336_cov_42.1638 . exon 11490 12313 . - . ID=g10956.t1.exon2;Parent=g10956.t1 NODE_380_length_25336_cov_42.1638 . CDS 11586 12313 . - 2 ID=cds.g10956.t1;Parent=g10956.t1 NODE_380_length_25336_cov_42.1638 . three_prime_UTR 11490 11585 . - . ID=g10956.t1.utr3p1;Parent=g10956.t1 #PROT g10956.t1 g10956 MASVNKEVERLLLAVKATDLASIIPSTVAVVAAAKSQLDGLSDGERNEVVALLGDLVARAKAYVAGNGGVILASQLVETASDIYRRTGLLGGGGGGAGGVVVAAAPPPALRKMASTDAVVIRLLVALNDAVACTRSSTGTPDALMRAVTQAASAAKELTAEKDSGGSLLIERLGFQSLIVMSLTAFVNAAKGSISQCVDGKFGVSGAQNVLTSASSLSRAAKEALAAHASELGPGCWDCGVCKSPMDDDSMCCVGGCSRFFHRRCVMLSRGAFECCEWFCDVPPCRAAALKREKDERERDEKRRQVIEAKTKADEEQRQRRLAEEKALKEKQAREDEARRKRELEERLERESRERQLKETEERAKIDIERHNEDSYERTKREIALEFEAEKRIEQELARKRQMQADSVTTEVAANGERVRKIAPLPADDGVVCLARALFDYEVVGGSDDDLLFFEGDVIAIRARDADGWWTGEFNGRRGQFPSSFVRQLEAGESTECVKKTLAIPTAAAKAAPVSPTPAQRQSTAAPSSPTHTAFKESPSAKRTSFGHKPASSAGGSVGSFLDSKSSPKPSRPSSEAAKPGDFDAAKKSMHMRTKSSDGLLGPKVRLDKSMISLPKQDSFEHVSHLGFDVDKGGFDARGLPQDWLTKLDGQSKAAGSPGGAPGTSPAPRSPLPRGGPPPPPVAAHGQPSQSQRPPPAALPPTRAAPPPPSGGHVPPPTRAAPPPPPGAQPVPQQQHSAGQPVASSVPNNRISDGGVSSLGGAMASPQTIRKAAPPPPPEDEEARRLKVEQKRRQMMLEEQGGAVPPPSHPPPPAPATHTRAVAPTPAPTSAPEVEAIPVLPPPRKPLPRYRALYDFAADRDDELSLIAGDYVRVEAVGQDGWLKGLCERTGKTGHFPGNYVVEVLF* # ORIGINAL: g4984.t1 original gene structure, not modified by PASA NODE_3310_length_3775_cov_35.5257 AUGUSTUS gene 87 3621 . - . ID=g4984;Name=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS mRNA 87 3621 . - . ID=g4984.t1;Parent=g4984;Name=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS exon 2581 3621 . - . ID=g4984.t1.exon1;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS CDS 2581 3621 . - 0 ID=cds.g4984.t1;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS exon 2011 2344 . - . ID=g4984.t1.exon2;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS CDS 2011 2344 . - 0 ID=cds.g4984.t1;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS exon 798 1712 . - . ID=g4984.t1.exon3;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS CDS 798 1712 . - 2 ID=cds.g4984.t1;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS exon 87 484 . - . ID=g4984.t1.exon4;Parent=g4984.t1 NODE_3310_length_3775_cov_35.5257 AUGUSTUS CDS 87 484 . - 2 ID=cds.g4984.t1;Parent=g4984.t1 #PROT g4984.t1 g4984 MLSAPFRFRVVIGGATYDFSASSVEDRRDWVDKIQLAIATTGTKESLSVSPRVVKKGESEFYGFPLRTRKSSDSDHHHRATEIFPDEPELIPYPHGYLDEAERGALAEVRKLHPVIMYRSGTKLPHARCLSLDAHNSHIVWRPRREGLFKKCLSIANTMPIHRMLELRVGQETREFRRYPYIEVEGQSFSIMYECERGPWAILRSLDFICESYDAFKRWQAALTPLLKDFGERGAHYRSFDPAIVWSAQAMSTFVKDSWADFDDVHRFLKEVLGAVDKPVAKDAYLRALGRQAENRGGELNRNGLYRFVSLLNTPVEATAVFSRYAKEPAKGMTPEEFMTFLEIEQKDTSRTLEDCYDLVMKHAHQHSVGMRDAHERGRLSLLGFVSFIASGDNSVISERDGKVWHDMTRPLTEYFIDSSHNTYLTGDQVRSDSSTDSYVRALLLGCRCVELDCWDGTDGEPVIYHGHTFTSKILFRDAVKAIADNAFRNNPYPVILSFENHCSVPQQVRMAEICTSIFKDMLLTMPVDPMETMMPSPEDLKYKILIKAKVKVEGAKGKKSESQTSRQDSSLSISSFGHRRSVSRTDSTRSTASDAKTLHRGLSKTQSAATADAKPFHRIASKTHSVDALSRRPSIPTHVAAGEATASASPATAPSSPAAGSTPALRTVLGKGDGVGPPSVSRKASEVNLPAVARKVSGLDNHGPSSPLMRSNAIVQRPSIVEESTSASGEAAVTTRASRTMSADSAGGASANGDGEEGDEAEGHSQFANAQAEELNGIETADEKRGDTEQNEVNKFAPELVAIVPYCRSIGFRSFNDIKEYARYNEMCSLGEKKMEFLAKRRPNEFVEHCNRQLVRIYPAGFRLDSSNFDPVKAWIVGAHLVALNYQTVGTYGV* # PASA_UPDATE: g3087.t1, single gene model update, valid-1, status:[pasa:asmbl_7178,status:12],[pasa:asmbl_7179,status:12], valid-1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . gene 1051 1883 . + . ID=g3087;Name=g3087.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . mRNA 1051 1883 . + . ID=g3087.t1;Parent=g3087;Name=g3087.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . five_prime_UTR 1051 1112 . + . ID=g3087.t1.utr5p1;Parent=g3087.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . exon 1051 1883 . + . ID=g3087.t1.exon1;Parent=g3087.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . CDS 1113 1883 . + 0 ID=cds.g3087.t1;Parent=g3087.t1;3_prime_partial=true #PROT g3087.t1 g3087 MVKLADVLVKLAHKRHPATYADKRQRQQVVVEAPKVTRPNDNDSDSDNNSDDESNSKSDKRSDTADESVNSDESTNGESDDSESDDSESDDNEKEKEQEDDEDDDSDGNAIRLGDTYFVRIADTRKQPGLAKYHKSNDGFPVGVIQEIHKGAGGRITAIDLWWYYRFGDLPPTIRNAVPGIIGTNELFETDDIEKNIPVDSLCGNAGVATSLKEYLRGDRHQLLCRFKYDIDTKEMSLKRLNIPKGAKITDKTAHPD # PASA_UPDATE: g3086.t1, single gene model update, valid-1, status:[pasa:asmbl_7177,status:12], valid-1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . gene 3 774 . - . ID=g3086;Name=g3086.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . mRNA 3 774 . - . ID=g3086.t1;Parent=g3086;Name=g3086.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . five_prime_UTR 650 774 . - . ID=g3086.t1.utr5p1;Parent=g3086.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . exon 3 774 . - . ID=g3086.t1.exon1;Parent=g3086.t1 NODE_4281_length_1883_cov_66.2395_potentialcontaminant . CDS 3 649 . - 0 ID=cds.g3086.t1;Parent=g3086.t1;3_prime_partial=true #PROT g3086.t1 g3086 MATLLELFTASQEKALFGSQPLCLSPLPPSPIPATPLALSASQCEARIASVMSHFYKSQSQEQLPPSECNKISDANKKVVSSRHDDVTASSSQQRHSFSQLLNMTGSQLDGTFGSFDASAFIVKSQSQLQFSQESVDIVKVRDTCTEKRTLPRCDEEPASLPQLTFSQVERLLTITPSQLNAGRSPTQDALRFLKSLSQEQHYSQDSDATVMPPC # ORIGINAL: g14192.t1 original gene structure, not modified by PASA NODE_2654_length_5536_cov_40.8317 AUGUSTUS gene 3061 5408 . - . ID=g14192;Name=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS mRNA 3061 5408 . - . ID=g14192.t1;Parent=g14192;Name=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 4560 5408 . - . ID=g14192.t1.exon1;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 4560 5408 . - 1 ID=cds.g14192.t1;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 4067 4223 . - . ID=g14192.t1.exon2;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 4067 4223 . - 1 ID=cds.g14192.t1;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 3380 3905 . - . ID=g14192.t1.exon3;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 3380 3905 . - 0 ID=cds.g14192.t1;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 3061 3203 . - . ID=g14192.t1.exon4;Parent=g14192.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 3061 3203 . - 2 ID=cds.g14192.t1;Parent=g14192.t1 #PROT g14192.t1 g14192 IDNCTYAITQPDADADYAIKRGFTTFVVRGRASSTDAEVILVKRTFGRVFKGHRLANSARPEFPNGYVAYQSLVGRNQYWDGEKYLADGVGGVSVRQGYNNNNNNNNNNGESELDGDGDNGDVERPVARRRVAGPRGDRYSNNRRADNNHYHNNNDNNNNDKNETDAADSNRGRALVVGRGGRNPTRDTAAVGHVPSASAPQTQRTGLPSQQHPGAPVSISQGITGDHSFAPQQLQLRGDAHAQTAHSQPIRHVATKQVAGSSSRVTSAAVSSPSAVQPHASSTTAVNSQSGAGAVSTGPTANQRWTLQGKRVLVTGGTKGIGLACVEEFLELGAEVFFVARSMNDVMAVGNALGALYPRRVHVLAVDCSDAVQRKSLVAHVSSKWDSLHVLVNNIGTNIRKKTPDVTEDDYRRIMSTNLDSCFDLTKLLYPLLRNANGASIVNISSVAGQVALRTGSVYAMTKAAMIQLTKNLACEWASDNIRVNCVAPWYINTPLVEPVLSNKEVLAEIVARTPLRRVGEPREVSGIVAFLCMSGASFITGQTLSVDGGSTVFGF* # ORIGINAL: g14191.t1 original gene structure, not modified by PASA NODE_2654_length_5536_cov_40.8317 AUGUSTUS gene 1211 1921 . - . ID=g14191;Name=g14191.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS mRNA 1211 1921 . - . ID=g14191.t1;Parent=g14191;Name=g14191.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 1712 1921 . - . ID=g14191.t1.exon1;Parent=g14191.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 1712 1921 . - 0 ID=cds.g14191.t1;Parent=g14191.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 1211 1378 . - . ID=g14191.t1.exon2;Parent=g14191.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 1211 1378 . - 0 ID=cds.g14191.t1;Parent=g14191.t1 #PROT g14191.t1 g14191 MSDNVALPLTASIEELRVSRDKYPESVLLDVRKAPDDKVIPGSIRCNGDKLAALTPADCEGKGLSFSAEQDIVVYCGSGNSSTRIVREMREKGFTKARVLEGGYTAWKNASLPLDCVKSASKFDL* # ORIGINAL: g14190.t1 original gene structure, not modified by PASA NODE_2654_length_5536_cov_40.8317 AUGUSTUS gene 249 753 . + . ID=g14190;Name=g14190.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS mRNA 249 753 . + . ID=g14190.t1;Parent=g14190;Name=g14190.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 249 343 . + . ID=g14190.t1.exon1;Parent=g14190.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 249 343 . + 1 ID=cds.g14190.t1;Parent=g14190.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS exon 641 753 . + . ID=g14190.t1.exon2;Parent=g14190.t1 NODE_2654_length_5536_cov_40.8317 AUGUSTUS CDS 641 753 . + 2 ID=cds.g14190.t1;Parent=g14190.t1 #PROT g14190.t1 g14190 LGDIIAQKSAERKEKEVSAAMAAAAKKTNVPGRIYITRPTEIGAHVTEVYPSEDQHSVSLDIPVIMQF* # ORIGINAL: g2200.t1 original gene structure, not modified by PASA NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS gene 45 2175 . - . ID=g2200;Name=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS mRNA 45 2175 . - . ID=g2200.t1;Parent=g2200;Name=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS exon 1045 2175 . - . ID=g2200.t1.exon1;Parent=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS CDS 1045 2175 . - 0 ID=cds.g2200.t1;Parent=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS exon 440 825 . - . ID=g2200.t1.exon2;Parent=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS CDS 440 825 . - 0 ID=cds.g2200.t1;Parent=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS exon 45 186 . - . ID=g2200.t1.exon3;Parent=g2200.t1 NODE_3852_length_2627_cov_41.2516_potentialcontaminant AUGUSTUS CDS 45 186 . - 1 ID=cds.g2200.t1;Parent=g2200.t1 #PROT g2200.t1 g2200 MGEAELEAITAAVARATAAYYAGRNGDARCTLERTILDIIAVASAHECSTASKTPYVTLLATARFFLAACCEVGSPADGDSCPRFEPDLPRAFVLHALVAGLVSTAEDATPSAIVVAAENLLSNPYLRSEKSSLLSGLFGCACFCLADFFHTGASGCVDDAAAETLLDLAECDKGFSERFRLGTKSRDAFSCYHYGRCLTLPLDASEDDEGALRMFECALDRESALTSSEDARCRAPSAAVPAGDCVVSGDGSVNGDRTVSARAVYAAASFRLAMALCRGLGCSEEDDPQNAIEKAAKEKQEKMSALLALVRSLNPKNTMDDAAIAKMVGIEPQALECEDTDVPTQPRRLRRDERALALLKAAADAGHVRAKREYAMALCQGGGERWPHIAKDESTALSILEGIAVRDPCALFALGTIYDITVDAMAADAADIVGRGMDKGEASPSTGACVSPDARKAEAYYRLAAAKGHVDAQYHLASVLFHATDDASGGSGVARDDVLMADMARRAASAGHTDAMALLGVCYIEGRGVPADQRWARHYIELARKAGTTII* # PASA_UPDATE: g12829.t1, single gene model update, valid-1, status:[pasa:asmbl_299,status:12],[pasa:asmbl_300,status:12], valid-1 NODE_107_length_39250_cov_53.3235 . gene 26513 30614 . + . ID=g12829;Name=g12829.t1 NODE_107_length_39250_cov_53.3235 . mRNA 26513 30614 . + . ID=g12829.t1;Parent=g12829;Name=g12829.t1 NODE_107_length_39250_cov_53.3235 . five_prime_UTR 26513 26537 . + . ID=g12829.t1.utr5p1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 26513 26591 . + . ID=g12829.t1.exon1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 26538 26591 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 26847 26906 . + . ID=g12829.t1.exon2;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 26847 26906 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 27107 27190 . + . ID=g12829.t1.exon3;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 27107 27190 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 27512 27595 . + . ID=g12829.t1.exon4;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 27512 27595 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 27846 27970 . + . ID=g12829.t1.exon5;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 27846 27970 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 28176 28281 . + . ID=g12829.t1.exon6;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 28176 28281 . + 1 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 28541 28651 . + . ID=g12829.t1.exon7;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 28541 28651 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 28893 29183 . + . ID=g12829.t1.exon8;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 28893 29183 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 29427 29561 . + . ID=g12829.t1.exon9;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 29427 29561 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . exon 29709 30614 . + . ID=g12829.t1.exon10;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . CDS 29709 30422 . + 0 ID=cds.g12829.t1;Parent=g12829.t1 NODE_107_length_39250_cov_53.3235 . three_prime_UTR 30423 30614 . + . ID=g12829.t1.utr3p1;Parent=g12829.t1 #PROT g12829.t1 g12829 MAQFPTPSPVDLNRDDEQALSAFLSGVNTLRDLGGLAPITPEFALPFLFARKFNAPRAIELYEGYMNLCKELNAFNISFDEVRDELATGKVLIPGTIDIDGAAIVCFLSRKHIPGERDVNTVLRAILYQLNFLLQRLDVMRGGITFVYDMTDSGWANFDYHVSESILRILQNSFPARLRALYVLNSPWWASTAISVLKSFMKKKLADKVVLVSNLFDFIPADSLPRELGGTDEHDHAALLNVLSQSANGLFSIAGVAKKESQPAPASATPAAAAPAPAPAPVARLPFDVNQPLPAVPPRPVLSAEVAFADLDMGFFKRLREQGRMKSEFKKLEAERSDSTFLNGWKPANKPKNRYQDVLPPDHSRVELSGGDGKDYINANYISIGKDERAYIATQGPLETTAHDFWRMVWEVNSGMVVMVTKCFEGRRQKCHQYWPDQGSGKMEVEGFHVTTLSEVEDGDAHTRTLEVVEVATGARREIEHVHYQGWPDHGVPSSPDSLLKLVRVAMDHRATHAGQPIVLHCSAGIGRTGTFIAIDAALSARRENAATVDFPAIVSKMRRQRAGMVQTADQYEFCYAAITRAIELGQ* # PASA_UPDATE: g12827.t1, single gene model update, valid-1, status:[pasa:asmbl_298,status:3], valid-1 NODE_107_length_39250_cov_53.3235 . gene 18118 21200 . + . ID=g12827;Name=g12827.t1 NODE_107_length_39250_cov_53.3235 . mRNA 18118 21200 . + . ID=g12827.t1;Parent=g12827;Name=g12827.t1 NODE_107_length_39250_cov_53.3235 . five_prime_UTR 18118 18159 . + . ID=g12827.t1.utr5p1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . exon 18118 18229 . + . ID=g12827.t1.exon1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . CDS 18160 18229 . + 0 ID=cds.g12827.t1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . exon 18347 18541 . + . ID=g12827.t1.exon2;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . CDS 18347 18541 . + 2 ID=cds.g12827.t1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . exon 18633 18802 . + . ID=g12827.t1.exon3;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . CDS 18633 18802 . + 2 ID=cds.g12827.t1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . exon 19009 20466 . + . ID=g12827.t1.exon4;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . CDS 19009 20466 . + 0 ID=cds.g12827.t1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . exon 20653 21200 . + . ID=g12827.t1.exon5;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . CDS 20653 21009 . + 0 ID=cds.g12827.t1;Parent=g12827.t1 NODE_107_length_39250_cov_53.3235 . three_prime_UTR 21010 21200 . + . ID=g12827.t1.utr3p1;Parent=g12827.t1 #PROT g12827.t1 g12827 MLSLRAARGLCRPSSVRHSRWQSTSGNDELRNLFVYTEPVASALAEGRPVVALESTIVAHGMPYPDNLTTALEVEAVVRSKNAVPATIAVLDGKIHIGLTREEIERVARAGAAARKTSRRDLPLVLAQKHIGATTVSGTMILAHLAGISTFVTGGIGGVHRGGESSMDISADLTELGRTPVNVVCAGIKSILDIGRSLEYLETQGVGVITYGPTPQFPAFFTPHSGFDAPAHLNSASAIARVAHAKDMLGLQTGMVVAVPIPAEYAADRAIIEEATRRALEDASLQGVGGRDATPFVLKRLAELTRGESLKANVALVKNNAAVGAEIAFELSRLRVDGGFSLRAGGDKQQAIRVAAAAAAATATSIAAAHTREAGDATSHAPDGGLSAPNIIAPCNAVKNARKRPVVVGGAIVDLVARPRPGHPLIARSSNPGRVRESYGGVARNIADCLARLRLDPLLITAIGSDARGGALIRHSQSIGMRTDGFLQVDGYDTAVYNAILDTEGELVVGVTDGDVFEAIGLDTVSVHADVIRSSPMTCIDGNVSDDTLRFVANLCEESKVPLLFEPTSVEKARNAVDAGIISKVHIIKPNADELEAMAAATGLSRNSTLAAEAELSGLCDNGGIPHEYMEHVERGLHMLNFVRYVVITLGPGGVILCRKSSDSNTRTAKHFPAGPPVSVVNVTGAGDSLVGGLVYGIVTGRGYDTAVRCGIVAARHSLRHFDAVAPSICPDIMDDVHLDREYPIVCKV* # ORIGINAL: g12823.t1 original gene structure, not modified by PASA NODE_107_length_39250_cov_53.3235 AUGUSTUS gene 169 9063 . - . ID=g12823;Name=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS mRNA 169 9063 . - . ID=g12823.t1;Parent=g12823;Name=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 8739 9063 . - . ID=g12823.t1.exon1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 8739 9063 . - 0 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 8508 8573 . - . ID=g12823.t1.exon2;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 8508 8573 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 8239 8313 . - . ID=g12823.t1.exon3;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 8239 8313 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 7885 8028 . - . ID=g12823.t1.exon4;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 7885 8028 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 7474 7638 . - . ID=g12823.t1.exon5;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 7474 7638 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 6804 6881 . - . ID=g12823.t1.exon6;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 6804 6881 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 6476 6571 . - . ID=g12823.t1.exon7;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 6476 6571 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 6019 6093 . - . ID=g12823.t1.exon8;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 6019 6093 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 5613 5705 . - . ID=g12823.t1.exon9;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 5613 5705 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 5252 5398 . - . ID=g12823.t1.exon10;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 5252 5398 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 4784 4948 . - . ID=g12823.t1.exon11;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 4784 4948 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 4526 4600 . - . ID=g12823.t1.exon12;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 4526 4600 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 4322 4399 . - . ID=g12823.t1.exon13;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 4322 4399 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 4079 4174 . - . ID=g12823.t1.exon14;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 4079 4174 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 3731 3805 . - . ID=g12823.t1.exon15;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 3731 3805 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 3495 3587 . - . ID=g12823.t1.exon16;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 3495 3587 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 3212 3289 . - . ID=g12823.t1.exon17;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 3212 3289 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 2876 2941 . - . ID=g12823.t1.exon18;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 2876 2941 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 2541 2609 . - . ID=g12823.t1.exon19;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 2541 2609 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 1917 2129 . - . ID=g12823.t1.exon20;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 1917 2129 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 1665 1733 . - . ID=g12823.t1.exon21;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 1665 1733 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 1401 1502 . - . ID=g12823.t1.exon22;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 1401 1502 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 1053 1133 . - . ID=g12823.t1.exon23;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 1053 1133 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 693 869 . - . ID=g12823.t1.exon24;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 693 869 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 380 460 . - . ID=g12823.t1.exon25;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 380 460 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 169 246 . - . ID=g12823.t1.exon26;Parent=g12823.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 169 246 . - 2 ID=cds.g12823.t1;Parent=g12823.t1 #PROT g12823.t1 g12823 MRRTPDLFVSPSNWTVAMAAASAGDTVYLTDGEYRSTPYEWALNRTTIRAASGAFPVIRCSFTNQTGMSLGSAPASNISILDLQFEGCLTALVLTSGCRVTASGLLFKNNAASIQLRSSAGIVLTDSVFTGTGTRSNNAIAGSSASIVLRNIEVKDGSVSAVLSLTSGATATVNGLRLANISATSMVSASQTSSILCSNVTILDSFVDTVVTLSGSARANVSSLSFVGSDTYSLVDMAGSSVCAASQWTVLPSDNFDTGLSLFYGRLIKAAGSSVARIQATLFSQTYVLADWESSLSAIVYVTGTATVVVTDLTIQDCEFDSTFLQLDSRGVFRGTRMSFQGAQIYLPENTTQSLVSAVFKATATLSNFTMSDSTGADVLLFASDSAAVTMNDVVVKDSDVNIGFAGYLTSSIVISGAQLIDSWLGHGIVLRDTATANVTRLSYLGSDGYALVDMTNASACAMSRTVVAQGKISDTVEYMDPALFYARDSSALNVTGFTMNELSEFDNSLLVAEDNATVILRDVAVTSSTVNADWESSHPAFLSGTASSTITLTDFVMTNCTFSASLVSMDASSSFVGSRIRVTGTVFVPDDGDTHPFVDVVDSAAIKLDTFSLEASYLSDTMISLTGSGTTSTLAHLSMHDIDALSLIWSEREVIIDQISVQDSTVEGHALVFYGPSAVKGVSMIGSYFDDSMVYYVQSSHKLTGAYFGGNDAYLGVYVEESTVAMEDVVLAGNSVALLAHIVDTGSMNATNLTLSENTYSVAPLSVGGSLLLNRFECYGNSALIVGDAASAPGCISLRNGEPTAIVTNGVFEDNYSDSWGGAIWIADYGYVQTRNCLFMRNEASSGGGALMVMEFAVWEGFGDSFVGNKVTSVDYLGHGGAVWLEANSFGFCSGCVFRSNSCTRKGGAITVKNEAEIELHNCAIEANVGRNGGGLNVADDGFAGLFNTSLN # ORIGINAL: g12825.t1 original gene structure, not modified by PASA NODE_107_length_39250_cov_53.3235 AUGUSTUS gene 13693 15333 . + . ID=g12825;Name=g12825.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS mRNA 13693 15333 . + . ID=g12825.t1;Parent=g12825;Name=g12825.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 13693 13888 . + . ID=g12825.t1.exon1;Parent=g12825.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 13693 13888 . + 0 ID=cds.g12825.t1;Parent=g12825.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 14201 15333 . + . ID=g12825.t1.exon2;Parent=g12825.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 14201 15333 . + 2 ID=cds.g12825.t1;Parent=g12825.t1 #PROT g12825.t1 g12825 MHRRTMANDWLARLISSFSRDWNSASRGSPRVALGPLDGDPRAMEAPLLLQGWGVAPALFAVVVAAVFIYRAAVRVHESRYERKPSEIVTTVVENQSDNPASELSDLESTRAVSLSIRSTQSSRSNARSSGLVSVVVDKGSVSTGSGDSGVGTSVTARGTVSRLNSGADTIRVDSHSLRSDSLASLSSISEGDASEAEDARRQRAAMPPSHRSPRAIGRIDEHLSPADEEMNGRTSSGINREQLEEDMWIRQAMASSAEGSVDRSRPDAKRTLSLDPSMEYLSHRRAQKSRQSLLTQPQPLRPSPLPQPALLPQPLQPQRVSHKAAQAQHDPTQQHRNHHQKSKHALRQPKRALSVSAAFIGDMERGLTSTSFDLSENVAQGDTRQGLDGSDEVLGIMREKRISFDDARLEMTRMRMLKAGIDPATGLPMDSRFVSFSGHQR* # PASA_UPDATE: g12831.t1, single gene model update, valid-1, status:[pasa:asmbl_308,status:12], valid-1 NODE_107_length_39250_cov_53.3235 . gene 34243 38102 . + . ID=g12831;Name=g12831.t1 NODE_107_length_39250_cov_53.3235 . mRNA 34243 38102 . + . ID=g12831.t1;Parent=g12831;Name=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 34243 34393 . + . ID=g12831.t1.exon1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 34243 34393 . + 0 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 34619 34767 . + . ID=g12831.t1.exon2;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 34619 34767 . + 2 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 34942 35094 . + . ID=g12831.t1.exon3;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 34942 35094 . + 0 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 35232 35423 . + . ID=g12831.t1.exon4;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 35232 35423 . + 0 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 35519 36313 . + . ID=g12831.t1.exon5;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 35519 36313 . + 0 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 36472 36628 . + . ID=g12831.t1.exon6;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 36472 36628 . + 0 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 36893 37067 . + . ID=g12831.t1.exon7;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 36893 37067 . + 2 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . exon 37571 38102 . + . ID=g12831.t1.exon8;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . CDS 37571 38027 . + 1 ID=cds.g12831.t1;Parent=g12831.t1 NODE_107_length_39250_cov_53.3235 . three_prime_UTR 38028 38102 . + . ID=g12831.t1.utr3p1;Parent=g12831.t1 #PROT g12831.t1 g12831 MAAAMAGIQSLSFGDRLRTLRHRAKEKIGASGPVFSADFLSAEAELQKRTGAYATVLTQTRAFISSATQTAKATELLAHGMKEFAAAEGTPAPLSSSAQSVASIVESMSSVFHDLIECIANEWGTQCQKFLEVDAKTVDLLKSECEVARVYHQVCEEKAAKEYPHILRDSTSGGRSNPGGDSTSATAPQPTPEVIQKRDAALTCYTSAVERFVASHSTSASIIDILITATAAADYVASYPGGGLEGAYVRVHEGEGQESVSGDTRVSDPSLREKSVVESQSQPKATAAGDVHVDWEELSASVSQLVDCKGTDDHVRMTQEADGWIVRRVRSLPKSDVRYYLKQKVGSASTSAPSEARAVANQPALAKAAPVGVKGKAGAPSSAPPHNTAGDRANEAPVSSEALSVFGNDRPPSLGSMQSVGSGASEDHVPPSPVTSTSGAWIVLDDVSASHPPSCSIAGSVVAQRLVIRGTDFRSVRNLMLDLTVTKAGDPVFGPDVRVHAGFLLAANELIEDIVGCLDRRAPLSITGHSLGGAVGTLVALKLIHRGFNVESVITFGTPKFLSGPKEALARMHMPLRRLLRVYHHHDVVRRVSLPLSEFSHHGPVLMILPDSTHYVMQHAPVREPMDAAGPKGLTFSTHRTQFYFEAVDRAAKRALRAREKKTHRRRGSVTREVLAAIDATVGDDDGCMDGADCGGLQFASSPGDGGVQNRLSLGTDAVGLHSAPPREASNDASSEFDMEDD* # ORIGINAL: g12828.t1 original gene structure, not modified by PASA NODE_107_length_39250_cov_53.3235 AUGUSTUS gene 21841 26051 . - . ID=g12828;Name=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS mRNA 21841 26051 . - . ID=g12828.t1;Parent=g12828;Name=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 25961 26051 . - . ID=g12828.t1.exon1;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 25961 26051 . - 0 ID=cds.g12828.t1;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 25523 25607 . - . ID=g12828.t1.exon2;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 25523 25607 . - 2 ID=cds.g12828.t1;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 25306 25412 . - . ID=g12828.t1.exon3;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 25306 25412 . - 1 ID=cds.g12828.t1;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 23046 25218 . - . ID=g12828.t1.exon4;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 23046 25218 . - 2 ID=cds.g12828.t1;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 21841 22777 . - . ID=g12828.t1.exon5;Parent=g12828.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 21841 22777 . - 1 ID=cds.g12828.t1;Parent=g12828.t1 #PROT g12828.t1 g12828 MPVLTPAKLNWFNQHPENLRNICILAHVDHGKTTLADSLVAANGIIPQRMTGKVRYMDSRSDEQERGITMKSSAIALYHEYGMYDVADRYLRVGSNKPYLINLIDSPGHVDFASEVSTAVRLCDGAIVIVDVVEGVCPQTHAVLRQGWMEGLRPVLVMNKIDRLISELKLTPAEAHAHLNRVLEQVNAAMGSLFREEQHAASDLRDRTPSSTEASVSDNSTADDGAPAGEKVYDWSVEFKDDTDLYFAPEAGNVVFACATDGWAFGIAEFATLYGAKLGVKSSILQKTMWGDYYINIKAQRILKGARAAGKKTIFEQFVLDNIWAVYDSVLVRKDSVRTEKIVATLGLADSKNRDLKHKDARVQLNAIMTGWLPLARSVLAMVCGQLPSPKEMRPERAARLVFGARDPSSFSAETLAIEHSVASCDASPDAPLVVVVGKMFAVEKSALPENRRRLLTADEMRQRREAAREKADGAGHDSPIPLVASSSSASVACVGKMDESSSVPMDLPMNLAECDEAFVAFARVFSGTLRAGASVRVLGPKYDPAVPSRHSAVVEVGSLYVLMGRELELIDVASAGHVIGIGGLGGHVLKHGTLSSSPACPSLLSMQTESTPIVRVAVEPESATGFPALAEGLRLLNAADPAVEVFVQETGEHVVCAAGEVHLERCLKDLRERFARIPLSVSAPIVPFRETVVLPPTIDKVGEALDQQRDLAKDRAARKIEDPVAHVTTANKWATIGVRAVPLPERVRSLLESHATLIRAMFASSGAKAGITVESAEGASGSLSTATGDGVVATAVAMGKGAAFYAELSEAFDASGAEAPGCASSPMWERLLGADGYARAMGGHSATPAAPSSGAAIDAGLATSSEDAADAETMRGLRNRGLVALENSLVTGFQMAALAGPMCEEPMHGVCLVLDHVTFAGTPADGAAVLGVDGLRVAGVDGGADVEEAVASVAAVGGAGSKHGPFTGQAMSAMREACRAAFLRQPARLMAAMYACDIQATTEVLGKVYAVLSRRGGRVLSEDMREGTDIFVIHAMVPVIESFGFSEEMRKKTSGLASAQLAFSHWEVLDDDPFWVPTTEEEISHYGEKADSESVARRYLDSVRRRKGLAVEEKIVAHAEKQRTLNKKK* # ORIGINAL: g12824.t1 original gene structure, not modified by PASA NODE_107_length_39250_cov_53.3235 AUGUSTUS gene 10329 12843 . - . ID=g12824;Name=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS mRNA 10329 12843 . - . ID=g12824.t1;Parent=g12824;Name=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 12729 12843 . - . ID=g12824.t1.exon1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 12729 12843 . - 0 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 12453 12533 . - . ID=g12824.t1.exon2;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 12453 12533 . - 2 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 12166 12271 . - . ID=g12824.t1.exon3;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 12166 12271 . - 2 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 11835 11919 . - . ID=g12824.t1.exon4;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 11835 11919 . - 1 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 11496 11642 . - . ID=g12824.t1.exon5;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 11496 11642 . - 0 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 11168 11283 . - . ID=g12824.t1.exon6;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 11168 11283 . - 0 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 10569 10698 . - . ID=g12824.t1.exon7;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 10569 10698 . - 1 ID=cds.g12824.t1;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 10329 10457 . - . ID=g12824.t1.exon8;Parent=g12824.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 10329 10457 . - 0 ID=cds.g12824.t1;Parent=g12824.t1 #PROT g12824.t1 g12824 MPYENNFRSAYYKALFVANEKKSEDASFWKRVLEEEVIDTKKLAWCTLKYGVPAVYRSVVWKVLMGILPPQRAIWDFVTKQKESHFADVVRAFSVLLGRRREITTFDAETIARMCVLQSPVPEQRAYEKANIGAEDVMAHVVSIAAVFVSIAESDCDAYYLTLAFLKESDMCKPVVLLSATLYPKINHCSGLLAAHDGELYQHFVSLGVGLDIFAVRLWDKVIGGTFQFAIFATLAILVLNRRRLLQSKTSTAVYEILENCASVETQLSDLNAEYFINKTMEIRDKLVGPSDPPMPQPRQTT* # PASA_UPDATE: g12832.t1, single gene model update, valid-1, status:[pasa:asmbl_304,status:12], valid-1 NODE_107_length_39250_cov_53.3235 . gene 38253 39175 . - . ID=g12832;Name=g12832.t1 NODE_107_length_39250_cov_53.3235 . mRNA 38253 39175 . - . ID=g12832.t1;Parent=g12832;Name=g12832.t1 NODE_107_length_39250_cov_53.3235 . exon 39006 39175 . - . ID=g12832.t1.exon1;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . CDS 39006 39175 . - 0 ID=cds.g12832.t1;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . exon 38662 38794 . - . ID=g12832.t1.exon2;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . CDS 38662 38794 . - 1 ID=cds.g12832.t1;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . exon 38253 38521 . - . ID=g12832.t1.exon3;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . CDS 38276 38521 . - 0 ID=cds.g12832.t1;Parent=g12832.t1 NODE_107_length_39250_cov_53.3235 . three_prime_UTR 38253 38275 . - . ID=g12832.t1.utr3p1;Parent=g12832.t1 #PROT g12832.t1 g12832 MSSLCGCVQNDGLGDQWWSAPAPLDVLKRELAPRISPDDAALVSGAAFFIDVRPDEDFRRSHIAYSVNANPGYLKRVGPRLRQARGSYVVVVAAKGDTGPKVAERFVRAHYAKVALLHGGADALAAHRPAMMCSCTCRVWDSMAGGVAVAGSQAATAAPVEFIECAQRPIYIRQGQGDSSGR* # PASA_UPDATE: g12830.t1, single gene model update, valid-1, status:[pasa:asmbl_302,status:12],[pasa:asmbl_303,status:12],[pasa:asmbl_306,status:12], valid-1 NODE_107_length_39250_cov_53.3235 . gene 30595 33904 . - . ID=g12830;Name=g12830.t1 NODE_107_length_39250_cov_53.3235 . mRNA 30595 33904 . - . ID=g12830.t1;Parent=g12830;Name=g12830.t1 NODE_107_length_39250_cov_53.3235 . five_prime_UTR 33814 33904 . - . ID=g12830.t1.utr5p1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 33763 33904 . - . ID=g12830.t1.exon1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 33763 33813 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 32766 33555 . - . ID=g12830.t1.exon2;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 32766 33555 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 32431 32639 . - . ID=g12830.t1.exon3;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 32431 32639 . - 2 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 32078 32248 . - . ID=g12830.t1.exon4;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 32078 32248 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 31870 31938 . - . ID=g12830.t1.exon5;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 31870 31938 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 31487 31588 . - . ID=g12830.t1.exon6;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 31487 31588 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 31252 31327 . - . ID=g12830.t1.exon7;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 31252 31327 . - 0 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 31090 31125 . - . ID=g12830.t1.exon8;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 31090 31125 . - 2 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . exon 30595 30924 . - . ID=g12830.t1.exon9;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . CDS 30722 30924 . - 2 ID=cds.g12830.t1;Parent=g12830.t1 NODE_107_length_39250_cov_53.3235 . three_prime_UTR 30595 30721 . - . ID=g12830.t1.utr3p1;Parent=g12830.t1 #PROT g12830.t1 g12830 MSQFPGYPSNPQAFQPQPGYPPQPGYPPQAAFGYPPAGQPGYPPQPGYPPQQQPGYPPAQPGYPPAGGQPGYPPAQPGYPPQQQPGYPPAQPGYPPQQQPGYPPAQPGYPPQQQSGYPPAPGAAAGGYPPAQAGYPPQQQPGYPPAQSGYPPAGGQPGYPPAPGAAGGYPPAYGAAPPAGAPYGAAPPAGAPYGAAPPAGAPYGAAPPAGAPYGAPAPGGYPAQPVGQNYAAGVPLAGVPAGPWANGYIQDPIWVATVRPAQPFDSERDAEILRKAMKGFGTDEKAIIDVLCQRTAEQRKRIEISFKQMYGKDLIKDLKSELSGQLENVTLALIRYRSEYDAWSLRDAMKGAGTNEHCLIEILCTRSNTEIKEIRETYHKMFNRDLEKDIISETSGHFKRLLVSLIQAHRDESPVLDMAKVSQDANALYQAGEGKWGTDESAFNRILAARSYPHLRAVFQEYQKVSTYDIERSIEREMSGDLASGMKTVVKAIRNRPAYFAECLYKSMHGAGTDDKTLIRVIVTRCEIDLGNIKEEFMKLYHKSLGNMITNDTSGDYKKALLKLVGDH* # ORIGINAL: g12826.t1 original gene structure, not modified by PASA NODE_107_length_39250_cov_53.3235 AUGUSTUS gene 15758 17606 . - . ID=g12826;Name=g12826.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS mRNA 15758 17606 . - . ID=g12826.t1;Parent=g12826;Name=g12826.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 17440 17606 . - . ID=g12826.t1.exon1;Parent=g12826.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 17440 17606 . - 0 ID=cds.g12826.t1;Parent=g12826.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS exon 15758 17330 . - . ID=g12826.t1.exon2;Parent=g12826.t1 NODE_107_length_39250_cov_53.3235 AUGUSTUS CDS 15758 17330 . - 1 ID=cds.g12826.t1;Parent=g12826.t1 #PROT g12826.t1 g12826 MAARVAVPSIGAYSDKYRQLEAARQRQVTEIAKARMLAEQVVRERQVHEETKRRKKLFEERERRRVEEEERLRQNTLEQRRREREMQTLVFKRAIESERVERRKSRQSSALSRHSQRSVVSNKSQSGSYAARAQAKMHSQKAPASDRPPALPRYSPAAGAHATPGGMTAQRKNGPGVSSNARPTYVAGNNYDNYAAEEESDFSDGETDSLEVDDDRSEEPREFRIARAREVELEESPEPSPQPQPLPVRPIRPTKRPQEEHSEDDDEPYDSLDDASDADERHLRHSPPATAVTAATAAAAAAVGVAVGVHGERQKALPMSSFGVDSAHAGENRVGTAIHPPRADVTDDAPESPPAVRPSRIPVAVAKSAPTVVTDGSAALGAATADSDNAKSEDDGWELESVRPLPVPRYPPAVAMDIVLSNTFGGKRLFGVGSGARGGGEDSRPEFATNGYGTANYGSYALPYIPPTPTVNTVSVDPRGQGRPPLAPGADGPRAHSRFPSISRAPPQQSPIPYAPSAAHKMRENALLAKCRQLQQGRRRMFSDEPDVDDGHMDLSGVSEEERRVMESLAKLDLRLLRR* # PASA_UPDATE: g7693.t1, single gene model update, valid-1, status:[pasa:asmbl_6337,status:12], valid-1 NODE_3635_length_3073_cov_39.2378 . gene 291 2848 . - . ID=g7693;Name=g7693.t1 NODE_3635_length_3073_cov_39.2378 . mRNA 291 2848 . - . ID=g7693.t1;Parent=g7693;Name=g7693.t1 NODE_3635_length_3073_cov_39.2378 . five_prime_UTR 2847 2848 . - . ID=g7693.t1.utr5p1;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . exon 2201 2848 . - . ID=g7693.t1.exon1;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . CDS 2201 2846 . - 0 ID=cds.g7693.t1;Parent=g7693.t1;5_prime_partial=true NODE_3635_length_3073_cov_39.2378 . exon 1745 1980 . - . ID=g7693.t1.exon2;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . CDS 1745 1980 . - 2 ID=cds.g7693.t1;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . exon 1215 1576 . - . ID=g7693.t1.exon3;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . CDS 1215 1576 . - 0 ID=cds.g7693.t1;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . exon 291 910 . - . ID=g7693.t1.exon4;Parent=g7693.t1 NODE_3635_length_3073_cov_39.2378 . CDS 291 910 . - 1 ID=cds.g7693.t1;Parent=g7693.t1;3_prime_partial=true #PROT g7693.t1 g7693 QVFVYKVTRNAGVLSITQASTSGQGSNPFEYETCGVVNSAYVNPFGSECGAKRTITFTFAEDFKSAAVINAPGARYTVAIIILVLLLATMAAIYALTRPTLKSLAKRPTVTLIRRSMSNYAHLAAIIVEAFQLTSIVLAADLGWTDMKGFIHAMEYIGLEFAFSWYWYVIMVLSGLWILYAILIWTGVTEKIREWEYGHFLLLPVTHLLPLMGTLGYIPTLLILMQSFSCVYTDDGTTYLDAECGRECWTSESWSIAVIGSVVLLMFVPMAIATAFFWSELQSTLDIKFRPESQVLDYVTKLVFCVLRVFFRQFTTAFLSILLAINVVIAVYYLVKRPSLVVWVDYIKAAAVSVSAWTAIIGLASHGVDAKNAVWPQACVYSGWVAIIALTIAFIRYKHPQVRVRPTQAKGGKDRMRKIAHLFASLKRSTSKFLSTISNSHGLGSVSSTSNSTAAHASFLSEEEWSKLEVAIVRWREEHVFKPSECDVLAKFIWAKDDLLGLIYDRSGRNLADFVAALRKPSLQLLMEEHALTWGLRRQSHGSASKVSPSTETRHSGGANDDAHAHAVVTAAAEELFRHQGKASMGPREDCPPIVESRSNSQCHFQGLDKLNSGMRDADGT # PASA_UPDATE: g3872.t1, single gene model update, valid-1, status:[pasa:asmbl_2594,status:12], valid-1 NODE_1776_length_9303_cov_46.3083 . gene 1403 8971 . + . ID=g3872;Name=g3872.t1 NODE_1776_length_9303_cov_46.3083 . mRNA 1403 8971 . + . ID=g3872.t1;Parent=g3872;Name=g3872.t1 NODE_1776_length_9303_cov_46.3083 . exon 1403 1826 . + . ID=g3872.t1.exon1;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . CDS 1403 1826 . + 0 ID=cds.g3872.t1;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . exon 2112 3214 . + . ID=g3872.t1.exon2;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . CDS 2112 3214 . + 2 ID=cds.g3872.t1;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . exon 3381 8971 . + . ID=g3872.t1.exon3;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . CDS 3381 8696 . + 0 ID=cds.g3872.t1;Parent=g3872.t1 NODE_1776_length_9303_cov_46.3083 . three_prime_UTR 8697 8971 . + . ID=g3872.t1.utr3p1;Parent=g3872.t1 #PROT g3872.t1 g3872 MQLPFAISCRFLAAMVLSIISLCGAGSTALRPYYIAPECISRASLTVFANNGDTSIICIDASTCFIGEGPVDPLDPNASIGAEYWTKFSPPKIADLFTSDQMTVTGEDGALYSVVDEGLYVSVDNGTSFTPYLLWDCGAAAAGIQCPIINPAYNPPIKPRPEGKVLQCSPNAVSTLNITDQTSNALYMTWESQETSSDSLYFLECDPSSNYDSGTAQVSSIGATSPPNYRGGQFMTVSSLGLLSASTVANSRDDYFVWWKTSAGDTGPISGAAKTLVVNISSINTAGDVCSAIVKALINSGISANATGATAPGNVVRATCDGPGAADLNIEQLTSGAVPSERRLHRGTLTKSTASASPVNGFGSVGGTGPEYATLTITGTGVTKGAASGGADFTNDSPAGAPSSGNWYIGNAKTKAWEYFYFYNNGGCADAKAVASAKATVHRVDVSGLTTKSGIVNAITNAANSIDGFTTNVTVSPDIPQSFAITASARSRLLDGSQFFLVDQAGKLWTWFFDKSGSRTSPLTNPTNPSGTFTRIDISSANESTTANEIAVKIRDSINAAAGMSFNATITTPFKTPVVSVTLNALTSPAIRSKVTITMLPTAALDSSVGGLIPLTSLDGSLFRICLESDGNADSTSFIGWCKRNVTAAGATIELVLVFNATKEQNALALTNVLNNATNYPGSVAPFIAERGVGANSDKVYVWQRDSGAVPTRGVATISTDNAGATPDGMSLAIVSQDGSFVSQLCYERTAGKCSASQIKVTRDDSYISVRRITSGVDPVVTVDGGHGFVDDDLVAFIETNDSGGSSKLAQRAFRVTSKFANQFKIISDTTVTTTSAGTFGRAYKAGTASTRVSDATADTNVDGTFTKSSHGLSNDDVLFFTGEASSTANFAGGKLCLVASVASSAGTFKCGGKRNTASETGIAYYKVADDSTKIAVSSVSVGANPTITTSAQHRLEVGDILVFPFPRNAMSQLVDGGIWQHKFFRVASVPTATSLTVSPSVTTTTTAAGYIYRSIVESKTHVVHGFKRIMDAHPVFPLHFETYISDPGSVSQLRAIQKKNGTVPSLYQHKITDQTVANGPSGMRFVMFDIANNNRKIEVCIEHTIMGPGGQCQPSTDPNNAVVEIQVFIQVVGVTSGANPTVTLRNAAHAVANEDLVVFLAVDGGATALNQRGFKVTGQNDVNFNLLPQVTTTGGATKGFAYELNSSKKIAASATANSDTMFTGPPDPSSITGNDDVIYLPGSQSVGTSFANGVICVVGSYNAQGSGADTWNCNRPRAALGTNTGIDYFLISSANQKKTVTSISSGNSPVLTFSAAHSLRPGQLVIVEVTAGLSDGEAALFRNKFFRVVTVPLATTLTLDPPLSSTLNTAGGSGFLWAVATKEPPTQTVVNNFFSIAANASNYPGGVSPFYVGSMTSKYNFFQQKVTGTPVGRPFFSVTTDTVANTVDGGIFNFYLADDSAVSVCFSKASGCPAPSARVVVVDLTGATSGNDVASRFARAIHDAAIPGIDDVTAVTSTVTIYLLPGPFPTKKPELFGNSSGTALCGAWSVTAVTTSYASMIGTYSIGGFYTAPVSWNIDALANPTYVHTDGSSPAWAVAFGDDSSTTFLSSATKSSTTVSQGAIDPGDVMVTASTAAYAVGNPIVTIANTVSLDLVPDPTKGVTFSSITFAGFTGYAQDKQKITLPAKSSILHGQAITFWSIIGGLKKYAVQFSTLPAGTYTLLPERNEVSVDVSDGPTTAVFANRLAAALDPLPGISASIGQQQVLITCDKAANTTHALNFNLFGAANNQQFVVWMDKGGATFTPPSGSIGVRVVLGDAVSATDVANKLLAAATSNNALTSAFRIVRKGTNGVRFVQIVGGEVAGRGRIVLGVDRADYDGNTGIGSNTIRLFSLTTEYILCVKQLAADCSIPESPTRVNIDCTNGPLCNSTGKVAPLIQAAIANGFGGAFSSAIVGTSLFITVNATGISKPSYIDWTYGSWQLTNLVDAGQMPRSMFGAESDGGNSNKDGIFVGSGESSYGWRYTQIRKGSANVYIEQDVPQANVNEVLTSGNTESDLFSSFSAALYAGTPGFRLFGDGVSGRNAVTAPYATEGRSVAPMYGVLEGFDVSLASTSISCRLWALSVNMSTAVGYGKPCNIGGSVTGMLRAADNATSAPLKMYPPKVTFVKYDQAIVTWKEPESKGNTASGFSAATTEVQFMRCDEGIGGCNGPITCPGNVCPTNTATQGSSGITLNGIRGDEAYYVVRVRTKHAGGVWGELSDPVYARDEPCPAATTLY* # PASA_UPDATE: g7125.t1, single gene model update, valid-1, status:[pasa:asmbl_2580,status:12], valid-1 NODE_1771_length_9313_cov_39.9748 . gene 5226 9182 . + . ID=g7125;Name=g7125.t1 NODE_1771_length_9313_cov_39.9748 . mRNA 5226 9182 . + . ID=g7125.t1;Parent=g7125;Name=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 5226 5446 . + . ID=g7125.t1.exon1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 5226 5446 . + 0 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 5829 5881 . + . ID=g7125.t1.exon2;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 5829 5881 . + 1 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 6077 6313 . + . ID=g7125.t1.exon3;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 6077 6313 . + 2 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 6580 6763 . + . ID=g7125.t1.exon4;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 6580 6763 . + 2 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 6971 7140 . + . ID=g7125.t1.exon5;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 6971 7140 . + 1 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 7312 7407 . + . ID=g7125.t1.exon6;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 7312 7407 . + 2 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 7582 7675 . + . ID=g7125.t1.exon7;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 7582 7675 . + 2 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 7934 8127 . + . ID=g7125.t1.exon8;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 7934 8127 . + 1 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 8361 8479 . + . ID=g7125.t1.exon9;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 8361 8479 . + 2 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 8658 8759 . + . ID=g7125.t1.exon10;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 8658 8759 . + 0 ID=cds.g7125.t1;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . exon 8991 9182 . + . ID=g7125.t1.exon11;Parent=g7125.t1 NODE_1771_length_9313_cov_39.9748 . CDS 8991 9182 . + 0 ID=cds.g7125.t1;Parent=g7125.t1 #PROT g7125.t1 g7125 MARRGSLISNGSASIASSSGMQHAPAPSTSSHAPHGGIPTASMAHMRERASTINVASMRSTVTTRRNRSKTNRSGNFFNWAPEIRAFTIVPYAVTAVVALEVSRIILARWPLSMLPLYISFIPFALMCVFSREAHMLMAAVWFVTMMSANIQSGAKRLRTHVLIASVAFIGCYIACVRFMDFFYSDTTGLRVWRGRVFEARRKIDYGGEVTFMIALFILGVAFNMLERFIKKYGMTLVERENNVNDLYYDNEQLKKELSKAASGDKKLDLDSPLTKVIQMLREIQRARDAGAEVVENLEFVIQILASNELFAPNLEFPAESVDSEVHTWLHSLLHTHASRTDVSRTARVQSRDSVTPIVETIPGAPTQQGVSVMAGSGQPVGLIKEVFRTEKHIRRIFEGIDTWEIDVFEIGQITNGRPLFYIAQAIFEKRNFIAHFNIDEQKLRRFLSAIEEGYKAANPYHNSMHAADVAQTIHFFLSQNGMKDALSIEEMFGAVVAALIHDYEHPGFNNAFLINTRHPLAIRYNDRSVCAIHSLVVFEVDSPAFARHLFIS* # ORIGINAL: g7123.t1 original gene structure, not modified by PASA NODE_1771_length_9313_cov_39.9748 AUGUSTUS gene 138 1698 . + . ID=g7123;Name=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS mRNA 138 1698 . + . ID=g7123.t1;Parent=g7123;Name=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS exon 138 486 . + . ID=g7123.t1.exon1;Parent=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS CDS 138 486 . + 1 ID=cds.g7123.t1;Parent=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS exon 627 648 . + . ID=g7123.t1.exon2;Parent=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS CDS 627 648 . + 0 ID=cds.g7123.t1;Parent=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS exon 845 1698 . + . ID=g7123.t1.exon3;Parent=g7123.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS CDS 845 1698 . + 2 ID=cds.g7123.t1;Parent=g7123.t1 #PROT g7123.t1 g7123 YLRALGAFYLRLIGTSLECYNYLEPLYNDYRKLRMRHRDGTMTITHVDAFVDSLLREERSCDIILPRIQKRHVLEETGELEPRTSALDDDDELSDGDDKEGGAMANGSDVSEGNAKSGRNDDSARDAKRHRDDRSDDDGRAGHDRRHSRSPPPKSRDRSRDRSRERDRNREKDSRRRSRSRSQERETEKNRERERERDRDRERERERGVRDRSRDRDRRDRDRSKERSRGGDRDRARDRSRERDRSKDRSRERDRERERGRERGRERERSRSRGRRSRSRDRSRGRSEERRRARRDDSRDRTRVRERSLSPAELGEIRDDGKKGARDSGRGDAREQAKGGEEKRDRTSKGSGGGSGGHRLRFKGGDGGDSSSRAKKDGSGGGGDAAGGDDIAYWNDMRAKLGLKPLQ* # ORIGINAL: g7124.t1 original gene structure, not modified by PASA NODE_1771_length_9313_cov_39.9748 AUGUSTUS gene 2198 3199 . - . ID=g7124;Name=g7124.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS mRNA 2198 3199 . - . ID=g7124.t1;Parent=g7124;Name=g7124.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS exon 2198 3199 . - . ID=g7124.t1.exon1;Parent=g7124.t1 NODE_1771_length_9313_cov_39.9748 AUGUSTUS CDS 2198 3199 . - 0 ID=cds.g7124.t1;Parent=g7124.t1 #PROT g7124.t1 g7124 MIPFTSTHLAGAIAADAHYLQAEMSKPTTESASMSAYDFPPSPPREEPASPRACVPDMDLGASDTQSAQFDGARISISDCAIAPASPVPSLAPTFFGSSSRRKSEPRRSISATGTSQPGVLFRFPSLTSSDEAEAGHFLVVLSKEYASSRRSARRRRLQQLRRRAIEEERAAKDAREGKSAHAPDCAVPASPPPSDDAPEADDDDEFAAYIARTQPVHVPSAGNHRHQRTRTASESSSALASSEGSTSPYPQHMHTPQHGGRGPKECASCGTRKTPMWRDDPEGTPLCNACGIRYKKYRVRCPGCRYIPRKDENPLGKCSKCKCRLVRDPRAR* # PASA_UPDATE: g10970.t1, single gene model update, valid-1, status:[pasa:asmbl_5404,status:12], valid-1 NODE_3003_length_4549_cov_39.8567 . gene 208 3733 . + . ID=g10970;Name=g10970.t1 NODE_3003_length_4549_cov_39.8567 . mRNA 208 3733 . + . ID=g10970.t1;Parent=g10970;Name=g10970.t1 NODE_3003_length_4549_cov_39.8567 . five_prime_UTR 208 208 . + . ID=g10970.t1.utr5p1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 208 315 . + . ID=g10970.t1.exon1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 209 315 . + 0 ID=cds.g10970.t1;Parent=g10970.t1;5_prime_partial=true NODE_3003_length_4549_cov_39.8567 . exon 743 843 . + . ID=g10970.t1.exon2;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 743 843 . + 1 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 1129 1263 . + . ID=g10970.t1.exon3;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 1129 1263 . + 2 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 1460 1558 . + . ID=g10970.t1.exon4;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 1460 1558 . + 2 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 1855 1994 . + . ID=g10970.t1.exon5;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 1855 1994 . + 2 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 2195 2333 . + . ID=g10970.t1.exon6;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 2195 2333 . + 0 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 2561 2658 . + . ID=g10970.t1.exon7;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 2561 2658 . + 2 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 2821 2959 . + . ID=g10970.t1.exon8;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 2821 2959 . + 0 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . exon 3342 3733 . + . ID=g10970.t1.exon9;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . CDS 3342 3577 . + 2 ID=cds.g10970.t1;Parent=g10970.t1 NODE_3003_length_4549_cov_39.8567 . three_prime_UTR 3578 3733 . + . ID=g10970.t1.utr3p1;Parent=g10970.t1 #PROT g10970.t1 g10970 IILENSTVRAAAVSALAKFGIQSEKLLPSILILLSRCLEDQDDEVRDRATLYLTLLRGDPAVARRFLVDDLSVSITGLERTLQEYIRAPSDAPFNIKTVPILSNVPTEVVATRKTTADVLAAPVKHKAEVNTQEQTAARLAAIPALQVLGPLFKSSKAQALTEAETEYVVACIKHTFNSHIVLQYDVTNTLNDQFLEHVSVDLAVDGAFVLERVIPVEKLPYGTPSHIYAVLRGPEDGGSVTGVVSNTLKFIVKDCDPNTGEPDEEGYEDSYLIEDLELTTADFMLPHNAGEFEPAWEAAGDDGQVEETFALSSMKSLEEAVTSVVGFLGMFPCKKSDVIAKGKNTHVLLLSGIFKGGDQVLAKAQLVFEPATGVAMQLTVRSPNPATSEIICAAIA* # PASA_UPDATE: g1306.t1, single gene model update, valid-1, status:[pasa:asmbl_7723,status:12], valid-1 NODE_492_length_22600_cov_38.4516 . gene 156 3180 . - . ID=g1306;Name=g1306.t1 NODE_492_length_22600_cov_38.4516 . mRNA 156 3180 . - . ID=g1306.t1;Parent=g1306;Name=g1306.t1 NODE_492_length_22600_cov_38.4516 . five_prime_UTR 2950 3180 . - . ID=g1306.t1.utr5p1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 2614 3180 . - . ID=g1306.t1.exon1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 2614 2949 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 2353 2475 . - . ID=g1306.t1.exon2;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 2353 2475 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 1902 2087 . - . ID=g1306.t1.exon3;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 1902 2087 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 1389 1613 . - . ID=g1306.t1.exon4;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 1389 1613 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 1179 1270 . - . ID=g1306.t1.exon5;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 1179 1270 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 859 961 . - . ID=g1306.t1.exon6;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 859 961 . - 1 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 468 724 . - . ID=g1306.t1.exon7;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 468 724 . - 0 ID=cds.g1306.t1;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . exon 156 264 . - . ID=g1306.t1.exon8;Parent=g1306.t1 NODE_492_length_22600_cov_38.4516 . CDS 156 264 . - 1 ID=cds.g1306.t1;Parent=g1306.t1;3_prime_partial=true #PROT g1306.t1 g1306 MSEATAPDGQQAVRVSKYRHLFSTVKKETRWTNLRVGDFQIRSNSDYFGFVWATPNSNGLYVVPIKGAGIVKVPDSPPLITTNSTILSFDFNPFVKDLVATGGRDGIVKLWKVPTDGLTGEENFEDAQHSYSAHQKRVAALQFHPTAENILVTAGGENFMKIWDVGSEREELLIVGHNDVPINWSWTNDGNAMVTSCKDKMMRMFDPRTNSTPVHQVEAHSNPKGFQVVCLNPSERILTVGFGKGSTREIALWDGRRASEPMCRVLAKDSSSALIPFYDAGTDLVYFADKGEGLCVYELSAEAPYIHYVSDVKSPLLAASMQPRSQCDVNKVEVGLFLKMTKDQVEPIAVQVPRKVTKLFQEDLYPPAPTGEPGCTNDAWFEGNSAPIPTRSLQPDGVTSVYDVPESEGGKKRAPNPTDSASATGGNGADGEDGDFVSLDKDDLDRRSIPLGVCEGALDELTSAYFRKWKTHWASLK # PASA_UPDATE: g1308.t1, single gene model update, valid-1, status:[pasa:asmbl_7725,status:3], valid-1 NODE_492_length_22600_cov_38.4516 . gene 6341 11939 . - . ID=g1308;Name=g1308.t1 NODE_492_length_22600_cov_38.4516 . mRNA 6341 11939 . - . ID=g1308.t1;Parent=g1308;Name=g1308.t1 NODE_492_length_22600_cov_38.4516 . five_prime_UTR 11391 11939 . - . ID=g1308.t1.utr5p1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 11196 11939 . - . ID=g1308.t1.exon1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 11196 11390 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 10806 11009 . - . ID=g1308.t1.exon2;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 10806 11009 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 10559 10617 . - . ID=g1308.t1.exon3;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 10559 10617 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 10220 10247 . - . ID=g1308.t1.exon4;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 10220 10247 . - 1 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 9797 9922 . - . ID=g1308.t1.exon5;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 9797 9922 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 9404 9540 . - . ID=g1308.t1.exon6;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 9404 9540 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 8949 9072 . - . ID=g1308.t1.exon7;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 8949 9072 . - 1 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 7072 8728 . - . ID=g1308.t1.exon8;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 7072 8728 . - 0 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . exon 6341 6789 . - . ID=g1308.t1.exon9;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . CDS 6737 6789 . - 2 ID=cds.g1308.t1;Parent=g1308.t1 NODE_492_length_22600_cov_38.4516 . three_prime_UTR 6341 6736 . - . ID=g1308.t1.utr3p1;Parent=g1308.t1 #PROT g1308.t1 g1308 METVWELLGPNDEPVRKFVPGFSDEEYTLTDLSAGVYNFVLHTPSRKFLHRYIMCQVIVYGRSKKETYRGMFRLDGASKTATAEFLVAEDDSPSELHAHFRLANWVLPMSVTAKLLRTPMRLVRSPGGEQIVSTMVVGQIAAILRKNSEFKQIAIRCGMIRPFLIIASMHPVTRHSVATCLGLTTLQSENSSDPHATAWDIISRPKRGLQAQSAGFLETILGHKRTSTLDWYKILSRSLRHTYGARPRPRLKDNDRSEACRNSAECGGISDNELNYLERISEDCHVSVSAEVSSEANAHLHDRTLLSLWRALQHGHVKSDAVCRLLLEITFASRKEMLGAAPNPAASWQRLMAAWERERAKQGTTRRRMSSVGHVVNEGSDVPSPLPIREYGETSTPTVPSTPTQQQQQQQQQQQQQRQQRQQLNQNQSQSTNGDIGSGAHNSMDAMNSRSTADVNTETDEFGDPEAEYPAERRPSVASGVQKMPMRSRRPTMLLNAAAQSANLIALEAALRQEAEAPTWSDTDSDQHQPPSAVLDVANVRALPSSQVPVVCANAHSHSKISTETESSQRGTMLNTPPLGQIARPSSTAATVASLQPLDDVNGGASGADDSDSSSSYDDAQQSLAEQMERDEGQLTSASALQAHPDVPIVLNDTAFTGNECVAHATTNGVSEHAMHDGQDVENVHVCADKRTSTNNECATRNVTCATHPHTSDNVAAAVSSTNTADSVRPLPSACRIANGTPRASPSSGGVRWADVTGPRVADSLRRQLVEGDTNPLDALRSSRERRSIRAIAAGGPGADVPQRFSILTVAPSKARQVPKSDRKLVSARGSAAGVHKAVTHILLQRLLLAAHGLSIENFY* # PASA_UPDATE: g1307.t1, single gene model update, valid-1, status:[pasa:asmbl_7724,status:3], valid-1 NODE_492_length_22600_cov_38.4516 . gene 3621 5734 . - . ID=g1307;Name=g1307.t1 NODE_492_length_22600_cov_38.4516 . mRNA 3621 5734 . - . ID=g1307.t1;Parent=g1307;Name=g1307.t1 NODE_492_length_22600_cov_38.4516 . five_prime_UTR 5498 5734 . - . ID=g1307.t1.utr5p1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . exon 5391 5734 . - . ID=g1307.t1.exon1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . CDS 5391 5497 . - 0 ID=cds.g1307.t1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . exon 4975 5085 . - . ID=g1307.t1.exon2;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . CDS 4975 5085 . - 1 ID=cds.g1307.t1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . exon 4228 4473 . - . ID=g1307.t1.exon3;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . CDS 4228 4473 . - 1 ID=cds.g1307.t1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . exon 3621 3875 . - . ID=g1307.t1.exon4;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . CDS 3710 3875 . - 1 ID=cds.g1307.t1;Parent=g1307.t1 NODE_492_length_22600_cov_38.4516 . three_prime_UTR 3621 3709 . - . ID=g1307.t1.utr3p1;Parent=g1307.t1 #PROT g1307.t1 g1307 MSASANTRDAAPTPKRRPEEENCVFCAIVRGEEEHRLVYRDDTVVVFHDRYPKAETHLLVIPVRHVRDIKTLRYEEDRHQILEYMLSVGKKCLAEESSKKKNGLNGQDAPSKDAAVTDGPDTEQPTAGSSSSPPQAQQENEYEHRFGFHVPPFTSVDHLHLHCLAPPFVKRNPLFSAFKGFHLKYTENAPWYMPADQLVRRFKEAIGDE* # PASA_UPDATE: g1309.t1, single gene model update, valid-1, status:[pasa:asmbl_7728,status:12],[pasa:asmbl_7729,status:12], valid-1 NODE_492_length_22600_cov_38.4516 . gene 15236 21643 . + . ID=g1309;Name=g1309.t1 NODE_492_length_22600_cov_38.4516 . mRNA 15236 21643 . + . ID=g1309.t1;Parent=g1309;Name=g1309.t1 NODE_492_length_22600_cov_38.4516 . exon 15236 21373 . + . ID=g1309.t1.exon1;Parent=g1309.t1 NODE_492_length_22600_cov_38.4516 . CDS 15236 21373 . + 0 ID=cds.g1309.t1;Parent=g1309.t1 NODE_492_length_22600_cov_38.4516 . exon 21581 21643 . + . ID=g1309.t1.exon2;Parent=g1309.t1 NODE_492_length_22600_cov_38.4516 . CDS 21581 21643 . + 0 ID=cds.g1309.t1;Parent=g1309.t1 #PROT g1309.t1 g1309 MFQSLGKLLFGGPTEPTANQTATAGHTEPTTNPSTQPPASATQMESDGDAMPIHAGKPNSRARSQNGSDEEADNRRGAKRAKPLNVTSTGARPAAAKVVPKRPREPDTPSAGRATKRQKPSTAAERPLATENSEDCVDILQSSSISTPPTSSTFDEACYRAGWDSLWERLQRNSSITFSDTDIDESCFEGPFLFITAENRQSMDVEILDHLEQEVRRAASAKNISFETIPIVLGVIPSQQSGGKKDAVEMTASEFPPRAKNLLLHLKAAKNHPDVQITKHNLKNCELMPESDQGEYRQKISKALADVRGTDQIFGFDCTETSQNAVQNWVALLVTCNADTKSDRARELSQRLAALCTEKILRITTCKPSDLVEDEGEDTGAEIVGEVNEEESRQAKEAEVDDIIEKAIQTYDINTQIERPSNILPRRQTEDPERGHSHQDTDPDGIHPPQSNLGDILYERIDLMLRAANDGTGVHGFKRLLFRIMTARFEMLEEQTADRLNAIEGLFDPTDHVRVIADASWSRPIAAGSGIDRNVFNGDISERFRNFYGQLIAHPDTLGVLVVDECHWGPIKQGAYDMFINLTRPTPQNADVKWKELRPTIADLWAKHNNDTGHLHSSHQFRNLVVLLVSATPYNQLSLNSRVPICHIAVDENGEKCLTSDSPSSRKVVVEDAHVVDWSETQGKSLLPFRLLAVTIRNRDADTDEDLAAKYDQFGVWAVRETNGEWALTCRPVAANSASPRQSMDILATSPATDSQRADFLHEVVRNDGVGYISMPSPDGNEDNKLYLRASGMDLNLVRKEEASTFSIDRRGAYDIMKIKCEGDESLAGARYVTHRASPKGGPPLLVLTDTSKAAPKRGATKGKKAADAASTTSDRQEFFVCPSGNTKFYHSVNYYVNSMRNASDEDRLIRQEHFLSDMLDLSKVKSAMATAAKEASKNMKKSNDKKPTVASDGAPPSANQRAVGNNVDVILACDYVYSIVRFAVFYRDDCLTTDACKLPEDNLAVLLRRGMSWWQERSAVVQKCLRDIENRTGLPMRVYLQGYATALQGEIARVGSELKTDWAVVLHAHVLSMSEQDGLADRLEWSDRLEKLKHALATDLQAAFRLSRTETDIIVESLIINRVGSDRTLQGSMKIVRMNSKGTALLFFNGLLNAMLATRLGQTFHIVRDFGDDKLATAFQESDDKAKEALAPLSKYWLRLLQPAECRKESCPCKRFDADASGWKCTCGHLHQSIEQYGHLKDLPCILILVDKGRMGDTFPSSFDCMDIRASYHAKKAKPQLSTVVQELGRLCRYASPGEKVPYALVGTTLFDAFKEGLMTTFSIRDMLKTHDTNLKTENHHPHNDYPWRYEDGSHDRHFDTPTRESAHHDLRLVLQAEPQVGKTGTYLALLRRLRREIHGRQYVALPSVEVAHEDQDMRLWAYPHGKSLKDAPDLQRYSSDGNNKYDHCGETYKVGFAFKREEIADAAKKMAQRREGRLQDSPATDDGQQVEFTRDRFPYELRRLRLTQEHPGPDTQQLYHTGLIEVSVRGLARVTARISVPVTHSHLVHWSDDNNTCTLVRTPGLDVRHWIFQPSHPAKGHNAKYARLDLLQAMEGKKYAQAIVCRQLDDYNDWRDTNIVIEMPATMPSTESGLPKDDRVEWGIGYARRFIQLLAETQELEHIFVIDDNISHMAQLVFPITTIPNTTTLTQTAPCSLWTVLERIQALPGEELLPADNDAHGRPLDLDALMLEHNLAATDASQRNSVWRYAGPSSRFAVIGTARFKHMARTRKPFKRTHVYSLVLINIGAIKAIPNAPLYKPWPYREDLNFNEMCDKAGLLVCKYNRFVQVKEPTCHSAGNGGGNSTGVGATTILHSTNPFDDTMDGDDGDDESDLEWQLSVLIQHAIKKASPDVTWAIVRAEDAPDFTARVKAILMKETGANSDDSRISQVDQIKDIDKATETILVVAVGEKAAQNRRAVRAILHFATKPSTMWRSLLIPLAIQREDRKGWFGDLYDDIDHVSEDPVLFCSAAKKTADGTVTTPSVLFIENKSVSVPAPTPPQPHPTSDRPAVAPPQVSTVCVL* # PASA_UPDATE: g761.t1, single gene model update, valid-1, status:[pasa:asmbl_4873,status:12], valid-1 NODE_2711_length_5374_cov_35.7 . gene 102 1494 . + . ID=g761;Name=g761.t1 NODE_2711_length_5374_cov_35.7 . mRNA 102 1494 . + . ID=g761.t1;Parent=g761;Name=g761.t1 NODE_2711_length_5374_cov_35.7 . five_prime_UTR 102 105 . + . ID=g761.t1.utr5p1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . exon 102 203 . + . ID=g761.t1.exon1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . CDS 106 203 . + 0 ID=cds.g761.t1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . exon 379 530 . + . ID=g761.t1.exon2;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . CDS 379 530 . + 1 ID=cds.g761.t1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . exon 661 887 . + . ID=g761.t1.exon3;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . CDS 661 887 . + 2 ID=cds.g761.t1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . exon 1077 1494 . + . ID=g761.t1.exon4;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . CDS 1077 1238 . + 0 ID=cds.g761.t1;Parent=g761.t1 NODE_2711_length_5374_cov_35.7 . three_prime_UTR 1239 1494 . + . ID=g761.t1.utr3p1;Parent=g761.t1 #PROT g761.t1 g761 MFEVTGGLNYILPIMIAVMTSKWVGDAFGHANLDDRFILLNDLPFLDNKEEFVHATTVANVMDVMGDRPLYVLHGLSHTVQSLEHTLTTLPYKGFPVVDSAQSMLVLGYVSRNELRVSLEKARRTEGVTDATECHFGAHIPSLSTSEDLHITMKHCLDLGCVRVTEESPMEFVLELFRAMGLRYVLVTKHGRLTGILTKKDVLHFVQGQERH* # ORIGINAL: g763.t1 original gene structure, not modified by PASA NODE_2711_length_5374_cov_35.7 AUGUSTUS gene 4368 5344 . - . ID=g763;Name=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS mRNA 4368 5344 . - . ID=g763.t1;Parent=g763;Name=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS exon 5158 5344 . - . ID=g763.t1.exon1;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS CDS 5158 5344 . - 0 ID=cds.g763.t1;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS exon 4879 4909 . - . ID=g763.t1.exon2;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS CDS 4879 4909 . - 2 ID=cds.g763.t1;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS exon 4663 4731 . - . ID=g763.t1.exon3;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS CDS 4663 4731 . - 1 ID=cds.g763.t1;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS exon 4368 4473 . - . ID=g763.t1.exon4;Parent=g763.t1 NODE_2711_length_5374_cov_35.7 AUGUSTUS CDS 4368 4473 . - 1 ID=cds.g763.t1;Parent=g763.t1 #PROT g763.t1 g763 MHLCIGPVRCRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKSDLDAQRDVTYEEAKQFADENGLLFLEASAKTGENVEEAFLETAKKIYQNIQDGSLDLNAAESGVQQKPAPSNISLTDKGAAGDKGCAC* # PASA_UPDATE: g762.t1, single gene model update, valid-1, status:[pasa:asmbl_4874,status:3], valid-1 NODE_2711_length_5374_cov_35.7 . gene 1997 4161 . + . ID=g762;Name=g762.t1 NODE_2711_length_5374_cov_35.7 . mRNA 1997 4161 . + . ID=g762.t1;Parent=g762;Name=g762.t1 NODE_2711_length_5374_cov_35.7 . five_prime_UTR 1997 2206 . + . ID=g762.t1.utr5p1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . exon 1997 2281 . + . ID=g762.t1.exon1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . CDS 2207 2281 . + 0 ID=cds.g762.t1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . exon 2574 2696 . + . ID=g762.t1.exon2;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . CDS 2574 2696 . + 0 ID=cds.g762.t1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . exon 2901 2959 . + . ID=g762.t1.exon3;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . CDS 2901 2959 . + 0 ID=cds.g762.t1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . exon 3456 3576 . + . ID=g762.t1.exon4;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . CDS 3456 3576 . + 1 ID=cds.g762.t1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . exon 3812 4161 . + . ID=g762.t1.exon5;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . CDS 3812 3970 . + 0 ID=cds.g762.t1;Parent=g762.t1 NODE_2711_length_5374_cov_35.7 . three_prime_UTR 3971 4161 . + . ID=g762.t1.utr3p1;Parent=g762.t1 #PROT g762.t1 g762 MVEAWFMDDEATSPQQPHKQTPNAPVSLDYLESFGVKYFNVDGDTDEGRASLDRICAELNIKNRDQVHIVESMAGYQDKIKMFFQEHIHEDDEVRHFVAGSGFFDVRDPDDKWVRIHAAKNDLLVLPAGIYHRFTLDTCNMATVTRLFADVPKWTPINRPVPADCIARTSYLAAIGRA* # ORIGINAL: g5302.t1 original gene structure, not modified by PASA NODE_1657_length_9949_cov_39.896 AUGUSTUS gene 416 3405 . - . ID=g5302;Name=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS mRNA 416 3405 . - . ID=g5302.t1;Parent=g5302;Name=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 3253 3405 . - . ID=g5302.t1.exon1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 3253 3405 . - 0 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 2777 2871 . - . ID=g5302.t1.exon2;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 2777 2871 . - 0 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 2424 2556 . - . ID=g5302.t1.exon3;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 2424 2556 . - 1 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 1685 1958 . - . ID=g5302.t1.exon4;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 1685 1958 . - 0 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 1331 1455 . - . ID=g5302.t1.exon5;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 1331 1455 . - 2 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 842 967 . - . ID=g5302.t1.exon6;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 842 967 . - 0 ID=cds.g5302.t1;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 416 583 . - . ID=g5302.t1.exon7;Parent=g5302.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 416 583 . - 0 ID=cds.g5302.t1;Parent=g5302.t1 #PROT g5302.t1 g5302 MACHEVVYGHSPNALATFVRPSEVLSSSQFIAANSAHVTIPEDGVKSAARLLYETMRRTGFSVANWRSHELHPRHADAEALEWIFVVDTLNFSFWTEASSPPYVVRHNGKDYSGYWSLCAALNRALQEGVAITSAHFYATITEDQLAHIFRSETATTIPMLKERVRNLNQVGSELLRSFGGLFSNVVTAANGSAQRLLDIIADRFPCFRDIGEFKGRPVAFYKRAQILVADVWACFEGKDIGRFDDIATITMFADYRVPQGLVHVGALQYSDALIHVMGERLFVPGEDLESEIRGCSIWSVELLRREMELLQKADPHAPSDLCINAILIDFFLWDTAKQKEGEIAHIPIHRIRSIFY* # ORIGINAL: g5305.t1 original gene structure, not modified by PASA NODE_1657_length_9949_cov_39.896 AUGUSTUS gene 8357 9572 . - . ID=g5305;Name=g5305.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS mRNA 8357 9572 . - . ID=g5305.t1;Parent=g5305;Name=g5305.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 9465 9572 . - . ID=g5305.t1.exon1;Parent=g5305.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 9465 9572 . - 0 ID=cds.g5305.t1;Parent=g5305.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS exon 8357 9241 . - . ID=g5305.t1.exon2;Parent=g5305.t1 NODE_1657_length_9949_cov_39.896 AUGUSTUS CDS 8357 9241 . - 0 ID=cds.g5305.t1;Parent=g5305.t1 #PROT g5305.t1 g5305 MARNSSSDLPMPVAFAVSSAAPMMAAIFTNPFDVAKTRLQLQGELMRLDKSKRVYTSTGDVIWKTFRAEGLRGLQRGIAPALMREGTRNFFRLGLYEPLANALTASDSNGRIGKFGKRLVAGATSGIIGSVVCNPFEIVKTRMQSQAAGGVTVQHGYTGMWHGLSSIYKQRGVQGLWAGSSINAMRALVGTSLTLATYSSAKDATIDLINPNSVASDVACSMTAAVTTTAGMHPLDIVRTRLYNQSEKGAGRMYSRGAIGAIVAIARTEGPLAFYKGVTAHFLRIGPHCVLTFVFLEQLRRTARTWLATTTPTHAAPTTTPTPRAVTQAA* # PASA_UPDATE: g5304.t1, single gene model update, valid-1, status:[pasa:asmbl_2261,status:3], valid-1 NODE_1657_length_9949_cov_39.896 . gene 6375 7620 . + . ID=g5304;Name=g5304.t1 NODE_1657_length_9949_cov_39.896 . mRNA 6375 7620 . + . ID=g5304.t1;Parent=g5304;Name=g5304.t1 NODE_1657_length_9949_cov_39.896 . five_prime_UTR 6375 6412 . + . ID=g5304.t1.utr5p1;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . exon 6375 6518 . + . ID=g5304.t1.exon1;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . CDS 6413 6518 . + 0 ID=cds.g5304.t1;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . exon 6653 6855 . + . ID=g5304.t1.exon2;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . CDS 6653 6855 . + 2 ID=cds.g5304.t1;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . exon 7153 7620 . + . ID=g5304.t1.exon3;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . CDS 7153 7527 . + 0 ID=cds.g5304.t1;Parent=g5304.t1 NODE_1657_length_9949_cov_39.896 . three_prime_UTR 7528 7620 . + . ID=g5304.t1.utr3p1;Parent=g5304.t1 #PROT g5304.t1 g5304 MVCQEQPLHQTKKMAKMNVVLAGLALVLCAASISQAAATGKTVAVIACDFEPDILSGYAADDLARLLQVGSKVLNASRNAGFLTVYTRVAFKAGYPEVSPRNMMFTQLAKQGLLKEGTAGTTIVPEVSPQDGDLVLTKTRVGAFSTTDLRTILGAHNINEIVLFGVSTSGVILSTVRDAADQDFTVTVLSDACADHTPEVHDVLLKQVFPRQATVTTAAEWVKSLAL* # PASA_UPDATE: g5303.t1, single gene model update, valid-1, status:[pasa:asmbl_2260,status:3], valid-1 NODE_1657_length_9949_cov_39.896 . gene 4287 6238 . + . ID=g5303;Name=g5303.t1 NODE_1657_length_9949_cov_39.896 . mRNA 4287 6238 . + . ID=g5303.t1;Parent=g5303;Name=g5303.t1 NODE_1657_length_9949_cov_39.896 . five_prime_UTR 4287 4441 . + . ID=g5303.t1.utr5p1;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . five_prime_UTR 4583 4601 . + . ID=g5303.t1.utr5p2;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . exon 4287 4441 . + . ID=g5303.t1.exon1;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . exon 4583 4667 . + . ID=g5303.t1.exon2;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . CDS 4602 4667 . + 0 ID=cds.g5303.t1;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . exon 5014 6238 . + . ID=g5303.t1.exon3;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . CDS 5014 6102 . + 0 ID=cds.g5303.t1;Parent=g5303.t1 NODE_1657_length_9949_cov_39.896 . three_prime_UTR 6103 6238 . + . ID=g5303.t1.utr3p1;Parent=g5303.t1 #PROT g5303.t1 g5303 MVTAMLRTSLCDLLKISVPIIQAPMAAATTPSLVAAVSNAGGLGSIGGAYIQPEQLREFIRAVRQLTTKPFAVNLFVPEPLAADADSFAGAEVARSTDVESSIISRVRTQMGLPRSVTGGTVPANFRPSFDEQLAVVLDENVPVFSFTFGVLDHAIVQRLKSNGTVVMGTATTVREARDLAQSGVDAIVAQGSEAGGHRGSAMTTPIHKATIGVMALVPQIASARLRIPLVAAGGIMDGRGLAASLMLEADGVQMGTAFLTSKECAWTDVQKQTLLQSTDEDTILTRALSGRTARAVENGLVRQFDGTRLQGPAWGLQERGLHDLHLSQMREITKLATDKSDADGMAMYAGQGTLLCRSASAEEIVTSTAREAVAVIEKIRGGR* # ORIGINAL: g2610.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 534 917 . - . ID=g2610;Name=g2610.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 534 917 . - . ID=g2610.t1;Parent=g2610;Name=g2610.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 534 917 . - . ID=g2610.t1.exon1;Parent=g2610.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 534 917 . - 0 ID=cds.g2610.t1;Parent=g2610.t1 #PROT g2610.t1 g2610 MSASVDSPLASPTALPVVPPATAPTAATPAPVTPPTADTVTRGAKVGWTMGSIISIVFWLVGAFIAGYLSWNCNSNWGWTMPWRILFSFFAALTSWTYVLTYVFYKSGTCDPKGYCAIPRVDEVAAA* # ORIGINAL: g2613.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 4781 7234 . - . ID=g2613;Name=g2613.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 4781 7234 . - . ID=g2613.t1;Parent=g2613;Name=g2613.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 4781 7234 . - . ID=g2613.t1.exon1;Parent=g2613.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 4781 7234 . - 0 ID=cds.g2613.t1;Parent=g2613.t1 #PROT g2613.t1 g2613 MTRCLAGTKATAYIDDIGVGSKTVAEHVKDVLAVMRALKKRNVFLRIAKCQFFRKEVIALGRLVSANGVTISAKAMQGIRDLAEPTTRNDVRSVYQSMAWWARFVPNFAVIGAPVSDMMQKERHFKWGEEQAAAYQALKDAICTSKPAYPPDYTHPMVLTTDASRIGVGAVLYRTDGGERRMVANASSKWSNAEKNYRHVGELEALGAVWGVLKFEEYLTGVVFPFIIEVDHKPLVTLFGGIKAISSSVTKRRIKRWAEILSQFNFVIRYVPGETMGITDTLSRFPSTTDVLLERCVGSIAMIVEGPTDRVAANDVGENATGDKRVYTKEEVEASARATHVQLSHAGMDRVEAHLRIRYGNWEHIRKCVRAAIGSCGVCQAVGPAREQGMVLPLRPLPIVTRPMERIAIDLLSLVRSAGGSRYVFGGQDAATKFIWLVPMASKAAEDVVLVLTAQVLPWGTPLIIQHDAGTEFENEVFKSFCTANAIKHHTTSVDRPQANGQAERVFSTALDWLRKELLEHKTERWECAVARVATAYNASVNSTTGRTPFELMRGELPQLPIDRQLGWLPAPSAYVDEDALRLRLTAAQDVQRMSADRRTTVTEVPAYDKGAMVLTRARTSERTNKLAPRWDGPYPVEEYVGRDCYLVHKGRTKVKVHVTDMKRQVATEGETTGLEPPMVTTPDIPLSAEVPTRTVRPVGTAAFTTWLWSHPWVSTTEATEVGQVRTALSTKAGRDFTYAMGSPLRGWMAYCGQVGHDTTTSPSSAEMDEWLAREAGTPHTKSQRRYSLRRAYRFAHESAFRQDCVRRLIEDAPVKE* # ORIGINAL: g2612.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 3429 4393 . - . ID=g2612;Name=g2612.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 3429 4393 . - . ID=g2612.t1;Parent=g2612;Name=g2612.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 4307 4393 . - . ID=g2612.t1.exon1;Parent=g2612.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 4307 4393 . - 0 ID=cds.g2612.t1;Parent=g2612.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 3429 3956 . - . ID=g2612.t1.exon2;Parent=g2612.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 3429 3956 . - 0 ID=cds.g2612.t1;Parent=g2612.t1 #PROT g2612.t1 g2612 MVDGASVLQKPPAGGGGRNDEERHEWRWDRSAYYIVEETKRAFYNFTVNKATISKLIIGYTSKDIVRLVTSQNEFCRFFPDATLVTITDICIDHNVPTCLAAVKAEVSDIARNLPEHLQEMIARADDRLVYGQDELRKCLAEYQIEKIYALPNLLSSNCNCVVHEIDSPVLASFGGMIGVAYQGVASPYDAVESFYNEGGAFLD* # ORIGINAL: g2611.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 1528 2100 . - . ID=g2611;Name=g2611.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 1528 2100 . - . ID=g2611.t1;Parent=g2611;Name=g2611.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 1528 2100 . - . ID=g2611.t1.exon1;Parent=g2611.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 1528 2100 . - 0 ID=cds.g2611.t1;Parent=g2611.t1 #PROT g2611.t1 g2611 MASRVVLVDIGGELRDDRERLDLYPVHSIDEFHTFGDLFRYPRPETPVYDTLKAIVVVGIMAEDSFVVRGQRVNDLEFINAAPFVGNMTTVRTRSSRTDPVPIIFIQGGDYRANMAKDVQEIFKWLGDTVRCWTVCAIEGEFDGEHLTSLLNGLNRTKSREECREFLQKETALIDLSKVETCATRRGRGR* # ORIGINAL: g2609.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 1 223 . - . ID=g2609;Name=g2609.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 1 223 . - . ID=g2609.t1;Parent=g2609;Name=g2609.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 1 223 . - . ID=g2609.t1.exon1;Parent=g2609.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 1 223 . - 0 ID=cds.g2609.t1;Parent=g2609.t1 #PROT g2609.t1 g2609 MADTINLSDCFIYQDDCNAASEQQIGQIGQIGQIEQIEPTAYEQLVLFMNSPESKAVVTHRTGDVIRCMTVSMD # ORIGINAL: g2614.t1 original gene structure, not modified by PASA NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS gene 7286 9517 . - . ID=g2614;Name=g2614.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS mRNA 7286 9517 . - . ID=g2614.t1;Parent=g2614;Name=g2614.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS exon 7286 9517 . - . ID=g2614.t1.exon1;Parent=g2614.t1 NODE_1692_length_9696_cov_22.3184_potentialcontaminant AUGUSTUS CDS 7286 9517 . - 0 ID=cds.g2614.t1;Parent=g2614.t1 #PROT g2614.t1 g2614 MSEQRSEKPKFQGATKDRLTVFERRWTLYEEAIRIPLTECQRSLNMLTACGPVIMSKVQAIVADAFAASTGLRGSANDNSVLTRMAIWSRFGVVADALEMRDASERPAFDAQLDRVGAKGVAEALEWLEEMMSTLAPTIAARVLVRLGIPEMPAVDGVDIQRVVEILPEDAGSTTRAGTWMAQIRAGGGADYLHVLVISMSNRLVHMAFYAHHRVYVRELAEAYGALRHFVLTRFGTTPFGRALLTKQMALGGIGEAVALMALAREQTGALEYNFGNGVRALKVVETAFKPKGPTGGATSGSGKLGGWERRQDGSGKSNESGGLSLDKQALTGVTKGKPVVGADGVRRCFKCESPDHISRNCPLMQVRKGPAITMITADNDEQLETCVVGTDGRKEHGIWSHDGTITVAGCERKGAARVLFDTGASTCAITHAACRRFGLTVLEDGSPSRTFSGIGRVKVQAVGRVANGASVRLVGYGETTLDDVCVLEDLPGGTEVLLGFDRLVHMGAIQRETVAAMEHLRDRTFADVAGKELATAHDDPTGVDGALLSVWLPEGERTTVSRADLSGLVEAGIPDAKIDEVIEAINERGWRDGCRLGMAYAPAELRLKDDAPPAVIYYPMRSPVKAQALKHDIAKCVEGGLIRRLSKEEVRALRYVTVPHLTGKPDGTFRMAIDYRNVNRFLVVRCRTEIPREEEFLARLAENKIFSVMDAVKGYWQLRLNTEAQMLTAFVDVSSADGAVYI* # PASA_UPDATE: g1822.t1, single gene model update, valid-1, status:[pasa:asmbl_2805,status:3], valid-1 # PASA_UPDATE: g1822.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2804,status:3], valid-1 NODE_1850_length_8932_cov_55.8036 . gene 367 2435 . + . ID=g1822;Name=g1822.t1 NODE_1850_length_8932_cov_55.8036 . mRNA 367 2435 . + . ID=g1822.t1;Parent=g1822;Name=g1822.t1 NODE_1850_length_8932_cov_55.8036 . five_prime_UTR 367 521 . + . ID=g1822.t1.utr5p1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 367 650 . + . ID=g1822.t1.exon1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 522 650 . + 0 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 760 822 . + . ID=g1822.t1.exon2;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 760 822 . + 0 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 1053 1394 . + . ID=g1822.t1.exon3;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 1053 1394 . + 0 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 1521 1633 . + . ID=g1822.t1.exon4;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 1521 1633 . + 0 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 1808 1955 . + . ID=g1822.t1.exon5;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 1808 1955 . + 1 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 2043 2128 . + . ID=g1822.t1.exon6;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 2043 2128 . + 0 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . exon 2213 2435 . + . ID=g1822.t1.exon7;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . CDS 2213 2288 . + 1 ID=cds.g1822.t1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . three_prime_UTR 2289 2435 . + . ID=g1822.t1.utr3p1;Parent=g1822.t1 NODE_1850_length_8932_cov_55.8036 . mRNA 367 2435 . + . ID=g1822.t1.1.5b6be70a;Parent=g1822;Name=g1822.t1 NODE_1850_length_8932_cov_55.8036 . five_prime_UTR 367 642 . + . ID=g1822.t1.1.5b6be70a.utr5p1;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 367 822 . + . ID=g1822.t1.1.5b6be70a.exon1;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 643 822 . + 0 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 1053 1394 . + . ID=g1822.t1.1.5b6be70a.exon2;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 1053 1394 . + 0 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 1521 1633 . + . ID=g1822.t1.1.5b6be70a.exon3;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 1521 1633 . + 0 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 1808 1955 . + . ID=g1822.t1.1.5b6be70a.exon4;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 1808 1955 . + 1 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 2043 2128 . + . ID=g1822.t1.1.5b6be70a.exon5;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 2043 2128 . + 0 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . exon 2213 2435 . + . ID=g1822.t1.1.5b6be70a.exon6;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . CDS 2213 2288 . + 1 ID=cds.g1822.t1.1.5b6be70a;Parent=g1822.t1.1.5b6be70a NODE_1850_length_8932_cov_55.8036 . three_prime_UTR 2289 2435 . + . ID=g1822.t1.1.5b6be70a.utr3p1;Parent=g1822.t1.1.5b6be70a #PROT g1822.t1 g1822 MRALRLAMNLRPTKATIFAGAALVAVVTIAALLSIKISKCHAKEIAASEQAAGNRLVVRYFVEKILETSPLRFGGTPATCSMEEKFAIIIPFRNRNAHLAMYIKYMSWYFAQQPKPVCVEGVYVIEQYDDAPFNKGWLMNAGYDILKRTGITHYVFNDVDFLPVLGVDYGVRPLLPTQLSSEADVHAYRRSYLENTGGCWTLTADMMERINGYSNKYLGWGGEDDDFYQRLVLSGLIEKDKSIGEPPRGKGMFVSFDGEDHTPRNKVSRENLDRLRAMEAGSDIWRTDGLSDLSYNLVGQETHIVEGLSVIRVRVNQL* #PROT g1822.t1.1.5b6be70a g1822 MRRYDTGICVCLSTYGHRVWVVCAGLKCRIGCTYIMIEQEIAASEQAAGNRLVVRYFVEKILETSPLRFGGTPATCSMEEKFAIIIPFRNRNAHLAMYIKYMSWYFAQQPKPVCVEGVYVIEQYDDAPFNKGWLMNAGYDILKRTGITHYVFNDVDFLPVLGVDYGVRPLLPTQLSSEADVHAYRRSYLENTGGCWTLTADMMERINGYSNKYLGWGGEDDDFYQRLVLSGLIEKDKSIGEPPRGKGMFVSFDGEDHTPRNKVSRENLDRLRAMEAGSDIWRTDGLSDLSYNLVGQETHIVEGLSVIRVRVNQL* # ORIGINAL: g1824.t1 original gene structure, not modified by PASA NODE_1850_length_8932_cov_55.8036 AUGUSTUS gene 4620 6828 . + . ID=g1824;Name=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS mRNA 4620 6828 . + . ID=g1824.t1;Parent=g1824;Name=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 4620 4730 . + . ID=g1824.t1.exon1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 4620 4730 . + 0 ID=cds.g1824.t1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 5297 5629 . + . ID=g1824.t1.exon2;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 5297 5629 . + 0 ID=cds.g1824.t1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 5899 6011 . + . ID=g1824.t1.exon3;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 5899 6011 . + 0 ID=cds.g1824.t1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 6225 6372 . + . ID=g1824.t1.exon4;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 6225 6372 . + 1 ID=cds.g1824.t1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 6485 6570 . + . ID=g1824.t1.exon5;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 6485 6570 . + 0 ID=cds.g1824.t1;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 6747 6828 . + . ID=g1824.t1.exon6;Parent=g1824.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 6747 6828 . + 1 ID=cds.g1824.t1;Parent=g1824.t1 #PROT g1824.t1 g1824 MLTFDLRRRRPFSWIALCVVAALVVYGMIRIYKRTEVILETSLVRFQGSAETCVGADSLAILIPYRNREAHLRVFLEYMSWYFAQHPVCLKGIFVAEQADEHLFNRGWLLNVAYTVAKEAGATYFVFHDVDYLPMMGVDYGPPSQPMQLSSQSVTFAYRKLYAEYSGGVTALTVEMMQTINGYSNKYWGWGGEDDDFYHRLVQTGLVAKGSSIGMPPKDKGIYITLDDKDHTQRTETPTEAFERLRKMKDGLEIWRDDGLTTLSYKVLGKDSKTVHGLPFMHMRVTSDGL* # ORIGINAL: g1823.t1 original gene structure, not modified by PASA NODE_1850_length_8932_cov_55.8036 AUGUSTUS gene 3028 3585 . - . ID=g1823;Name=g1823.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS mRNA 3028 3585 . - . ID=g1823.t1;Parent=g1823;Name=g1823.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 3398 3585 . - . ID=g1823.t1.exon1;Parent=g1823.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 3398 3585 . - 0 ID=cds.g1823.t1;Parent=g1823.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS exon 3028 3115 . - . ID=g1823.t1.exon2;Parent=g1823.t1 NODE_1850_length_8932_cov_55.8036 AUGUSTUS CDS 3028 3115 . - 1 ID=cds.g1823.t1;Parent=g1823.t1 #PROT g1823.t1 g1823 MPIDRGWLTLDWALRNVGHPSRRLVLSFHADFVLVKPLQSLRAAMANLFGLPYSVRAGDTVVDSPTLSVVGSSDSHSLGRLRLEHGLSNRI* # ORIGINAL: g14260.t1 original gene structure, not modified by PASA NODE_1615_length_10184_cov_38.7393 AUGUSTUS gene 3995 4966 . - . ID=g14260;Name=g14260.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS mRNA 3995 4966 . - . ID=g14260.t1;Parent=g14260;Name=g14260.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS exon 3995 4966 . - . ID=g14260.t1.exon1;Parent=g14260.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS CDS 3995 4966 . - 0 ID=cds.g14260.t1;Parent=g14260.t1 #PROT g14260.t1 g14260 MFQLFAVGRATVAMRLPSVGHVARPALPIAAAMRPFTSTRSASDGAPTTTKHSATPQNAHAFIPGIAPSVEVFERAKALFYNPPLSGPETPLSRERKSYRDEMRQLRKAYAEDHKKLVAARRMEAEKEAERRGSRPPTQILGESYRKHRLELKERFHRVSHYVLAPKRMRPNAVTAALHQTRPMPSRWHLARGRFAAHDLGVTDEQAQVVRREFQAAVSPGRALVERLKHSAPTFISRDNLLMRVSESILKIGTANPRIETYRLEKRLTRSDIVNERRSDLDKRIAVLMDIRDQVVKKEAAKAPAAVKSEVVGSNSNAAPSAI* # ORIGINAL: g14259.t1 original gene structure, not modified by PASA NODE_1615_length_10184_cov_38.7393 AUGUSTUS gene 2122 3029 . - . ID=g14259;Name=g14259.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS mRNA 2122 3029 . - . ID=g14259.t1;Parent=g14259;Name=g14259.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS exon 2449 3029 . - . ID=g14259.t1.exon1;Parent=g14259.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS CDS 2449 3029 . - 0 ID=cds.g14259.t1;Parent=g14259.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS exon 2122 2332 . - . ID=g14259.t1.exon2;Parent=g14259.t1 NODE_1615_length_10184_cov_38.7393 AUGUSTUS CDS 2122 2332 . - 1 ID=cds.g14259.t1;Parent=g14259.t1 #PROT g14259.t1 g14259 MGSDAASASAGLGSAIRTPASAENTGATAAHNAGESDGVSAAIKEATCRVCTDFKSWTRARRREKPGADATAQSAPTSSAKSVSKGQAHADHDSDAAHGAAGKSSGGSRASAALGAATAASAAAAALSSSAGDAGTHASAGAEYPPVRDDCPVDSVELGRATWTFLHTMAAYYPEAPSAEQQTEMGVFVRGLSRFYPCDYCASHLRERLKIDPPQTHSRAAFARWMCGIHNEVNERLGKPAFDCDRVDERWRDGWKDGSCEGP* # PASA_UPDATE: g14258.t1, single gene model update, valid-1, status:[pasa:asmbl_2154,status:12], valid-1 NODE_1615_length_10184_cov_38.7393 . gene 77 1654 . + . ID=g14258;Name=g14258.t1 NODE_1615_length_10184_cov_38.7393 . mRNA 77 1654 . + . ID=g14258.t1;Parent=g14258;Name=g14258.t1 NODE_1615_length_10184_cov_38.7393 . five_prime_UTR 77 77 . + . ID=g14258.t1.utr5p1;Parent=g14258.t1 NODE_1615_length_10184_cov_38.7393 . exon 77 260 . + . ID=g14258.t1.exon1;Parent=g14258.t1 NODE_1615_length_10184_cov_38.7393 . CDS 78 260 . + 0 ID=cds.g14258.t1;Parent=g14258.t1;5_prime_partial=true NODE_1615_length_10184_cov_38.7393 . exon 524 1654 . + . ID=g14258.t1.exon2;Parent=g14258.t1 NODE_1615_length_10184_cov_38.7393 . CDS 524 1558 . + 0 ID=cds.g14258.t1;Parent=g14258.t1 NODE_1615_length_10184_cov_38.7393 . three_prime_UTR 1559 1654 . + . ID=g14258.t1.utr3p1;Parent=g14258.t1 #PROT g14258.t1 g14258 YDTASDVYSFGMVMFEVMARAKPFAGMVFRDVEDLVDRIVYRSLRPRLGMNWPPNYVSLMSDCWADDSTARPSFRDIVARLDALAESSLAVQSRDGLPPSTQSSYAPLSASLGGDKSVRSERADTAVTSVPGSVALPDDKQTNLDPCAVPKADCVMSECEAVGLMTPPSLPHIARDGPKRTMCLPRIDLRQERNADTPPMKRQVSSLSIGGAALAQARAGVEAAELAATQCTEGNSGRLAVASNEHTPGSPTSPGSPVSPSPSLSERRGVPMINIKMTRDPTMPPMLRRQPSALSMNPSLMSQALAAAIAACDASSAASTPATQTPTLSRRSTPPASPPLRENSLPGGRFSMPVSPHLTSHASSSRASPIMTPNGMQKSLSLLEVPKTAGVRSLEVKFPAGSKNP* # PASA_UPDATE: g14261.t1, single gene model update, valid-1, status:[pasa:asmbl_2151,status:12], valid-1 NODE_1615_length_10184_cov_38.7393 . gene 5810 6867 . - . ID=g14261;Name=g14261.t1 NODE_1615_length_10184_cov_38.7393 . mRNA 5810 6867 . - . ID=g14261.t1;Parent=g14261;Name=g14261.t1 NODE_1615_length_10184_cov_38.7393 . five_prime_UTR 6726 6867 . - . ID=g14261.t1.utr5p1;Parent=g14261.t1 NODE_1615_length_10184_cov_38.7393 . exon 6594 6867 . - . ID=g14261.t1.exon1;Parent=g14261.t1 NODE_1615_length_10184_cov_38.7393 . CDS 6594 6725 . - 0 ID=cds.g14261.t1;Parent=g14261.t1 NODE_1615_length_10184_cov_38.7393 . exon 5810 6046 . - . ID=g14261.t1.exon2;Parent=g14261.t1 NODE_1615_length_10184_cov_38.7393 . CDS 5951 6046 . - 0 ID=cds.g14261.t1;Parent=g14261.t1 NODE_1615_length_10184_cov_38.7393 . three_prime_UTR 5810 5950 . - . ID=g14261.t1.utr3p1;Parent=g14261.t1 #PROT g14261.t1 g14261 MARGQQKIQSQQRNLEKKKASMKSTINQKESAAAALVFSCVVCKSQMGDPKTYRQHFDSKHPKAPVPPEIADVQA* # PASA_UPDATE: g14262.t1, single gene model update, valid-1, status:[pasa:asmbl_2155,status:3], valid-1 NODE_1615_length_10184_cov_38.7393 . gene 7165 9885 . + . ID=g14262;Name=g14262.t1 NODE_1615_length_10184_cov_38.7393 . mRNA 7165 9885 . + . ID=g14262.t1;Parent=g14262;Name=g14262.t1 NODE_1615_length_10184_cov_38.7393 . five_prime_UTR 7165 7254 . + . ID=g14262.t1.utr5p1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . five_prime_UTR 7461 7533 . + . ID=g14262.t1.utr5p2;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . exon 7165 7254 . + . ID=g14262.t1.exon1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . exon 7461 7821 . + . ID=g14262.t1.exon2;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . CDS 7534 7821 . + 0 ID=cds.g14262.t1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . exon 8159 8395 . + . ID=g14262.t1.exon3;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . CDS 8159 8395 . + 0 ID=cds.g14262.t1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . exon 8898 9448 . + . ID=g14262.t1.exon4;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . CDS 8898 9026 . + 0 ID=cds.g14262.t1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . exon 9708 9885 . + . ID=g14262.t1.exon5;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . three_prime_UTR 9027 9448 . + . ID=g14262.t1.utr3p1;Parent=g14262.t1 NODE_1615_length_10184_cov_38.7393 . three_prime_UTR 9708 9885 . + . ID=g14262.t1.utr3p2;Parent=g14262.t1 #PROT g14262.t1 g14262 MADQPANNGEAQPTQTHAEANSNASADASAGNTASGDAPPPQVPLERTWSSDGLTLYAKLGLQKGATEDEVKKAYRKLALRCHPDKNPDNPEAAEKFKEINYANSILMDKRKRALYDKEGSQGLALWEQLGGDDFSYKILMRGGLYKGLFIFCGIITGCYFCCCLCCCFNCCCGKCKPGDPAETYEAPDPNEPGTPGETDDEHVSQQPKATFAMPPP* # ORIGINAL: g3693.t1 original gene structure, not modified by PASA NODE_3377_length_3593_cov_46.7468 AUGUSTUS gene 268 1660 . + . ID=g3693;Name=g3693.t1 NODE_3377_length_3593_cov_46.7468 AUGUSTUS mRNA 268 1660 . + . ID=g3693.t1;Parent=g3693;Name=g3693.t1 NODE_3377_length_3593_cov_46.7468 AUGUSTUS exon 268 520 . + . ID=g3693.t1.exon1;Parent=g3693.t1 NODE_3377_length_3593_cov_46.7468 AUGUSTUS CDS 268 520 . + 0 ID=cds.g3693.t1;Parent=g3693.t1 NODE_3377_length_3593_cov_46.7468 AUGUSTUS exon 681 1660 . + . ID=g3693.t1.exon2;Parent=g3693.t1 NODE_3377_length_3593_cov_46.7468 AUGUSTUS CDS 681 1660 . + 2 ID=cds.g3693.t1;Parent=g3693.t1 #PROT g3693.t1 g3693 MDTESEWRAAMWWLVEFVVGLDGRLQIVAALFSLPSVSWCLYHLRHVPGRLLRLLNVCEIFLDGLENLYKYYERIEARCNSLLKGFHGHKGRVFVHLSCYNGAQTSKVQRRVQDALIDAYSNTVMKKCIKCWCRVKACLAARLPSVLARLPFVYVPTPYFPLQALTLTPHVQYGGTITPETWKAWDRGINTIVDSLVSTYEAQQDGDPLEVVLTGHCPQSVWICLGRRIAAANIHSRFIVVNIPARPGYEKKIDVFRVPTVEEVHGVSRTEQSIVQYVGPMNEEENAVQLLYVRLCSERSFDIDVPGCEDALGNRCICSLREVRPLPGVKVVVSQANVSSIAQVCGQAVDSQDRSRRLVVATSTVDVVNFILGLSLKLFSNVVIMDVDANRTPIVAFRCGGINGRLSPAP* # ORIGINAL: g13362.t1 original gene structure, not modified by PASA NODE_2362_length_6579_cov_62.4276 AUGUSTUS gene 164 2194 . - . ID=g13362;Name=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS mRNA 164 2194 . - . ID=g13362.t1;Parent=g13362;Name=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS exon 2010 2194 . - . ID=g13362.t1.exon1;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS CDS 2010 2194 . - 0 ID=cds.g13362.t1;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS exon 1345 1390 . - . ID=g13362.t1.exon2;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS CDS 1345 1390 . - 1 ID=cds.g13362.t1;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS exon 1075 1209 . - . ID=g13362.t1.exon3;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS CDS 1075 1209 . - 0 ID=cds.g13362.t1;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS exon 439 609 . - . ID=g13362.t1.exon4;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS CDS 439 609 . - 0 ID=cds.g13362.t1;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS exon 164 305 . - . ID=g13362.t1.exon5;Parent=g13362.t1 NODE_2362_length_6579_cov_62.4276 AUGUSTUS CDS 164 305 . - 0 ID=cds.g13362.t1;Parent=g13362.t1 #PROT g13362.t1 g13362 MDAAAEATATQGVVVVQAGEIDAKYSPVDIEGSVATCVKGTGDIGTESNDDGGADENTLGHRHWTLREFDELVPQYKLHDGRKTLLEVGCGVGNLFFPLVEADPSLFVHACDFATNAVELIKKNPLYDESRIHAFVCDITTDALHSAVNANSVDFVSMIFVLSAIHPDAMPRAIANIFKVLRPGGVVVFRDYGLYDQAMLRFGKGQKLGDAFYVRQDGTRAYYFSE # PASA_UPDATE: g13363.t1, single gene model update, valid-1, status:[pasa:asmbl_4142,status:12], valid-1 NODE_2362_length_6579_cov_62.4276 . gene 2915 6330 . + . ID=g13363;Name=g13363.t1 NODE_2362_length_6579_cov_62.4276 . mRNA 2915 6330 . + . ID=g13363.t1;Parent=g13363;Name=g13363.t1 NODE_2362_length_6579_cov_62.4276 . exon 2915 3987 . + . ID=g13363.t1.exon1;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . CDS 2915 3987 . + 0 ID=cds.g13363.t1;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . exon 4197 4282 . + . ID=g13363.t1.exon2;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . CDS 4197 4282 . + 1 ID=cds.g13363.t1;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . exon 4561 6126 . + . ID=g13363.t1.exon3;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . CDS 4561 6126 . + 2 ID=cds.g13363.t1;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . exon 6326 6330 . + . ID=g13363.t1.exon4;Parent=g13363.t1 NODE_2362_length_6579_cov_62.4276 . CDS 6326 6330 . + 2 ID=cds.g13363.t1;Parent=g13363.t1 #PROT g13363.t1 g13363 MDNNAQQQPHNLCVDTRFSELSLNEVERIRSANDGDADLRSQRASAPILSALEALFESPIAPPAEQALVIVRKGALLNRKCAHTPLPHPQFVIVDDATNELHIYNQYRKRLEFSVDLYLLREIRFGRRAKGFANMSPSIGAEVCFTVVYGRQFASMSEVNFVCHSAEECLLWMRGLHTITKDLTQRDISTVWIKKMWLQVRHSKKDKAMHMKHIVEFLIKLNAKVEKGRLHHLIKIATNGRTDESLATELEFVTFYRSLHPRSVESALFLKVARNGRFAIAHEFVDFVRKEQGWVTATEENALSIFPAYGFTKSLTLDGFTSYLASEHNAILDPSTFEINNDMNLPLNDYFIASSHNTYLLGDQLKSESSVEAYIRALRSGCRCVELDCWDGGDGEPVIYHGHTLTSKIKFTDVIKAIRDHSFDTSPYPVILSFENHCSVPQQVFQAQYLRETLGEMLNVPPLPEGATQLPTPEQLKFKILLKNKIVGQAEADVPPDWDPEAMQGSGGAGGAGGAGADDRYSLGRSDSSTSIGRSPSINSRDDGDNLSVASSSDFGGYVVDDGGLASLQGMREDRTGSSASESGRGAQEDRSFGEKEKSGQLASMASMSSMGSSSAISTTGTSPATSRKQPVLKVAQELSDLVAYTVPVRFKGFEHRGKPNEMSSFSEPKAFKLAKKEGHEFVEYNKRQLSRIYPAGYRVDSSNYNPVPMWCCGCHMVALNYQRYDTPMQLNEAVFMQNGGCGYVAKPIYLRDPDIPFDPNVVSAVGLQNKDGHFRPRHIAVTILSGQQLPKPGTAHKARRAAMQLLSKPSDWLRGKQKKENEGFLNTISDPFYVVNCHVKVGVVGLGTDTVLHETKVVEDNSFSPLWNDTFNFDVVAPELAVLRFELWYENLGLTGHYTIPLDLCRQV* # PASA_UPDATE: g9759.t1, single gene model update, valid-1, status:[pasa:asmbl_2426,status:12], valid-1 # PASA_UPDATE: g9759.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2427,status:12], valid-1 NODE_1715_length_9550_cov_37.7892 . gene 1 2876 . + . ID=g9759;Name=g9759.t1 NODE_1715_length_9550_cov_37.7892 . mRNA 1 2876 . + . ID=g9759.t1;Parent=g9759;Name=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 1 52 . + . ID=g9759.t1.exon1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 1 52 . + 0 ID=cds.g9759.t1;Parent=g9759.t1;5_prime_partial=true NODE_1715_length_9550_cov_37.7892 . exon 208 353 . + . ID=g9759.t1.exon2;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 208 353 . + 2 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 676 804 . + . ID=g9759.t1.exon3;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 676 804 . + 0 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 1106 1297 . + . ID=g9759.t1.exon4;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 1106 1297 . + 0 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 1463 1629 . + . ID=g9759.t1.exon5;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 1463 1629 . + 0 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 1779 2255 . + . ID=g9759.t1.exon6;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 1779 2255 . + 1 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 2662 2876 . + . ID=g9759.t1.exon7;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . CDS 2662 2791 . + 1 ID=cds.g9759.t1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . three_prime_UTR 2792 2876 . + . ID=g9759.t1.utr3p1;Parent=g9759.t1 NODE_1715_length_9550_cov_37.7892 . mRNA 1 2556 . + . ID=g9759.t1.1.5b6be70a;Parent=g9759;Name=g9759.t1 NODE_1715_length_9550_cov_37.7892 . exon 1 52 . + . ID=g9759.t1.1.5b6be70a.exon1;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 1 52 . + 0 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a;5_prime_partial=true NODE_1715_length_9550_cov_37.7892 . exon 208 353 . + . ID=g9759.t1.1.5b6be70a.exon2;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 208 353 . + 2 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . exon 676 804 . + . ID=g9759.t1.1.5b6be70a.exon3;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 676 804 . + 0 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . exon 1106 1297 . + . ID=g9759.t1.1.5b6be70a.exon4;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 1106 1297 . + 0 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . exon 1463 1629 . + . ID=g9759.t1.1.5b6be70a.exon5;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 1463 1629 . + 0 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . exon 1779 2556 . + . ID=g9759.t1.1.5b6be70a.exon6;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . CDS 1779 2421 . + 1 ID=cds.g9759.t1.1.5b6be70a;Parent=g9759.t1.1.5b6be70a NODE_1715_length_9550_cov_37.7892 . three_prime_UTR 2422 2556 . + . ID=g9759.t1.1.5b6be70a.utr3p1;Parent=g9759.t1.1.5b6be70a #PROT g9759.t1 g9759 QQQQQQQRSDADKEPGEGGKTQPFGFADFLERMRHPSSVDLVKGIRQFIASYQAQAANPSVSIDDQSTSVHNFVAETLRRIARHSQWKNATQAELDNAAEGLEKYLMTKLYAHAFCPLGSRDAEEDDSLRLRIERLSSFVHAEHLDIDGAVKACGDAPFVAAGQEMGRLSTFKPPRDKLVCILNSCKIIFEAIQRTRTAGADEFLPTLIYVVLRANPSQIMSNVNYIQRFRHPDRMTGEAAYYFTMLLGAVSFLQRAGPDSLSIAPELFEAEMASAEAKQAALRAGIAPTPVTAPTPVTSAAVLSGTAGGRIPAQSAQGPPQVQQLHAWPSSHSGINSRGVSPADFGVSGSGSGSRDSDGASGLEGIDQKKTAELFQLLGIAHEPPVRRFLEVPFDEMTVADLRNLHAEYRRLASHNEQLVRTIALNLAL* #PROT g9759.t1.1.5b6be70a g9759 QQQQQQQRSDADKEPGEGGKTQPFGFADFLERMRHPSSVDLVKGIRQFIASYQAQAANPSVSIDDQSTSVHNFVAETLRRIARHSQWKNATQAELDNAAEGLEKYLMTKLYAHAFCPLGSRDAEEDDSLRLRIERLSSFVHAEHLDIDGAVKACGDAPFVAAGQEMGRLSTFKPPRDKLVCILNSCKIIFEAIQRTRTAGADEFLPTLIYVVLRANPSQIMSNVNYIQRFRHPDRMTGEAAYYFTMLLGAVSFLQRAGPDSLSIAPELFEAEMASAEAKQAALRAGIAPTPVTAPTPVTSAAVLSGTAGGRIPAQSAQGPPQVQQLHAWPSSHSGINSRGVSPADFGVSGSGSGSRDSDGASGLEGIDQKKTAELFQLLGIAHEPPVRCVCVCMCGFLVPSECLWMYGCLMEGSCMRMLFCRVFGTFAYSYVYLMDVGGRSG* # PASA_UPDATE: g9760.t1, single gene model update, valid-1, status:[pasa:asmbl_2429,status:3], valid-1 NODE_1715_length_9550_cov_37.7892 . gene 3131 8033 . + . ID=g9760;Name=g9760.t1 NODE_1715_length_9550_cov_37.7892 . mRNA 3131 8033 . + . ID=g9760.t1;Parent=g9760;Name=g9760.t1 NODE_1715_length_9550_cov_37.7892 . five_prime_UTR 3131 3310 . + . ID=g9760.t1.utr5p1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 3131 3340 . + . ID=g9760.t1.exon1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 3311 3340 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 3599 3703 . + . ID=g9760.t1.exon2;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 3599 3703 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 3877 4014 . + . ID=g9760.t1.exon3;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 3877 4014 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 4321 4370 . + . ID=g9760.t1.exon4;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 4321 4370 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 4674 4761 . + . ID=g9760.t1.exon5;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 4674 4761 . + 1 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 5269 5406 . + . ID=g9760.t1.exon6;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 5269 5406 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 5595 5681 . + . ID=g9760.t1.exon7;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 5595 5681 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 5921 6041 . + . ID=g9760.t1.exon8;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 5921 6041 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 6250 6364 . + . ID=g9760.t1.exon9;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 6250 6364 . + 2 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 6656 6716 . + . ID=g9760.t1.exon10;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 6656 6716 . + 1 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 6986 7050 . + . ID=g9760.t1.exon11;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 6986 7050 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 7242 7362 . + . ID=g9760.t1.exon12;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 7242 7362 . + 1 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . exon 7641 8033 . + . ID=g9760.t1.exon13;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . CDS 7641 7730 . + 0 ID=cds.g9760.t1;Parent=g9760.t1 NODE_1715_length_9550_cov_37.7892 . three_prime_UTR 7731 8033 . + . ID=g9760.t1.utr3p1;Parent=g9760.t1 #PROT g9760.t1 g9760 MAQVQQWLQALASAVRSKNGAVSGALLSLSDAHTIRLRELMNLNQASLDMACESALSRVSIDAPYDEIAKFHVKCVLLIAKGNAEEAYTNQASLVGGFLRTLPADSNWWLDVLRVIDLDLRRTAVMADEQLARQGKKASKLDDAARVLMRCFTVVGNDRSPLETSKKWGTLQVVNNLFKIYFRLNNHRLCKNIIRSVESPGFPDLAKFKIGDVVTYRFFAGRYVMFDSNYREAEKHLSAALEHCHRDAVKNKRLIVMYLTPVKLLLGRLPTEALLRKYGLFQFVDIVRAVRTGNLLLLNNALRLHQAFFVQRGIYLILEKLKTIVYRNLFKRVHLICGTNKLPLSNFIAALGCVGVTMDRDEIECVIANLIHQKYIKGYLHHTQGFLVLSQTAAFPPLAGLL* # ORIGINAL: g9761.t1 original gene structure, not modified by PASA NODE_1715_length_9550_cov_37.7892 AUGUSTUS gene 8318 9418 . - . ID=g9761;Name=g9761.t1 NODE_1715_length_9550_cov_37.7892 AUGUSTUS mRNA 8318 9418 . - . ID=g9761.t1;Parent=g9761;Name=g9761.t1 NODE_1715_length_9550_cov_37.7892 AUGUSTUS exon 9249 9418 . - . ID=g9761.t1.exon1;Parent=g9761.t1 NODE_1715_length_9550_cov_37.7892 AUGUSTUS CDS 9249 9418 . - 2 ID=cds.g9761.t1;Parent=g9761.t1 NODE_1715_length_9550_cov_37.7892 AUGUSTUS exon 8318 9076 . - . ID=g9761.t1.exon2;Parent=g9761.t1 NODE_1715_length_9550_cov_37.7892 AUGUSTUS CDS 8318 9076 . - 0 ID=cds.g9761.t1;Parent=g9761.t1 #PROT g9761.t1 g9761 PVGAPAVLAPAPAKPLPKRTVARVIRAYQAQNVGELDLNVDDKVVVHEQNDDGWWKGQFRIKVGYFPADHVVVTAGTQSAPPASAPPPVLATPAGGPPARRPSSPSSMPQPEQSRETAPSPAAESREKRPLPLPKPIRVPTAAPTATPTAAAHVTQAPPIAPRPSILSRKPASRRPGHAAHPQPSTSSASDAPAESETKPPIMPKPPRLAVATPVFEAEEDPYGDEAIYEGAEGTEGESGDAGVYEMTNVQTVRAIYTYSPQSHDELEITEGDVLAIDTTADVEEGWLVAVRRDGARGVIPSTYVAYC* # ORIGINAL: g13850.t1 original gene structure, not modified by PASA NODE_215_length_31119_cov_41.9311 AUGUSTUS gene 27092 27673 . + . ID=g13850;Name=g13850.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS mRNA 27092 27673 . + . ID=g13850.t1;Parent=g13850;Name=g13850.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 27092 27673 . + . ID=g13850.t1.exon1;Parent=g13850.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 27092 27673 . + 0 ID=cds.g13850.t1;Parent=g13850.t1 #PROT g13850.t1 g13850 MSGPAHPQPPGHNSSTHHVLQSSPAGQGPPQSPSFLPSTLDPDNHPVMTQKMVPLVASRGAPAGSSESSPPVGRATPPTNERPTKSFGHELRERIRILRTIKQHEDACAKLRLSRDALTPGAEWALPHDPSVQRAVRVLRKEANAGHTLVPLAIHETMTEAFTRVDAERVQAWLAAVSVMSYFDGDRLLIVLE* # ORIGINAL: g13848.t1 original gene structure, not modified by PASA NODE_215_length_31119_cov_41.9311 AUGUSTUS gene 17528 21100 . + . ID=g13848;Name=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS mRNA 17528 21100 . + . ID=g13848.t1;Parent=g13848;Name=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 17528 17803 . + . ID=g13848.t1.exon1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 17528 17803 . + 0 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 17906 18593 . + . ID=g13848.t1.exon2;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 17906 18593 . + 0 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 18714 18928 . + . ID=g13848.t1.exon3;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 18714 18928 . + 2 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 19148 19262 . + . ID=g13848.t1.exon4;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 19148 19262 . + 0 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 19449 19497 . + . ID=g13848.t1.exon5;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 19449 19497 . + 2 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 19805 19993 . + . ID=g13848.t1.exon6;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 19805 19993 . + 1 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 20461 20594 . + . ID=g13848.t1.exon7;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 20461 20594 . + 1 ID=cds.g13848.t1;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 20700 21100 . + . ID=g13848.t1.exon8;Parent=g13848.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 20700 21100 . + 2 ID=cds.g13848.t1;Parent=g13848.t1 #PROT g13848.t1 g13848 MYGLGCNTPCKCENGAACDASTGKCTCTFGWTGVICNVVVAPSVPKVNATTELTQDGIGIRLRWSHDDVGPRAWNAWRYEIRRAGCIPKVYQVGDVLTFIDTNVVIGQGYTYFVQPFNIKNVSSPSAGQFSIERLEKAELPSPPYTVSSTPTLDPDNNQHPMIKFTWKEDSSSGPIIETLIFRDGRLILEGRMATEYKDRDVVFGRTYEYEIVSVNQYGNSNATRFSETASIGPTDSGTPTAGASSSSNVVGPVAGGVVGAIVGAAGIVFAILFVRKRASRKKMEALARTELDLIDTVVRRPEIAEIEMPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTALSSADEIRSARSAFMAEIDLMRTIPKHTNIIELVGVCTQSEPNCMVLEFAAHGDLRHFLSNGKASDFTSTDLLCFCIDIARGMEHLAKCEIVHRDLAARNCMVVAGPRPPNSIENGWKLSPKAQVIVKVADMGLSRDTSGSGDYYMAKTRRKLPVKWMSPESLQHRIFTQASDVWSFGIVMWEVFARGAKPYPGLENHAVSTYLSQDKRMEPPMDCPKLVSAAMESCWRRLAETRPQFSQIVLQLRRGMAALCGTEGGGGHLSGRGIGSGDLDAVNMSDIAISGTYALTVPDDVDTQYAETVPNPGEGETLYTLDSENAMFEQNSKTAGQHSLA* # PASA_UPDATE: g13851.t1, single gene model update, valid-1, status:[pasa:asmbl_3646,status:12], valid-1 NODE_215_length_31119_cov_41.9311 . gene 28786 31023 . - . ID=g13851;Name=g13851.t1 NODE_215_length_31119_cov_41.9311 . mRNA 28786 31023 . - . ID=g13851.t1;Parent=g13851;Name=g13851.t1 NODE_215_length_31119_cov_41.9311 . exon 30843 31023 . - . ID=g13851.t1.exon1;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . CDS 30843 31023 . - 0 ID=cds.g13851.t1;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . exon 30517 30575 . - . ID=g13851.t1.exon2;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . CDS 30517 30575 . - 2 ID=cds.g13851.t1;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . exon 28786 30379 . - . ID=g13851.t1.exon3;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . CDS 29183 30379 . - 0 ID=cds.g13851.t1;Parent=g13851.t1 NODE_215_length_31119_cov_41.9311 . three_prime_UTR 28786 29182 . - . ID=g13851.t1.utr3p1;Parent=g13851.t1 #PROT g13851.t1 g13851 MSGARTPMSNVITGSVVIIAAFTLTTAFGYIPETAIAAIIVASVMTKIDLQMFIYLWRVNFWDLLVFLIAFLSTLFLGIEYGILIGTGANVVLRLYRTSRPQIAVLGRIDEPPYFVPLADHADAVRPEGILIFQLQEALIFSNWSYIRKAVFKIERGLLKKSFSSDSLDLAALGIDTEDINEDGGIDVDSLYRPTDYHTLRDEVGDEEHGDGASVKDDSEKGDGDAKENEDGTPAPARRAHGELDPEGPEVRKKKHKTSGRQFISDLKVGMGLKAAKRLPRRRPQVAKGTEVGTLEEDDAGGVSTSVQMEPVRGVPAQPSAGTSLDDMLKEDTDAISMGSSKLVVVPEDGASSIGDADSIVPVGDDGRGEIMRAFIFDMTCVHDIDSAGIDALRMILADWNSKNVVMCIAGAKPPVMDMLRNVQYLKATGTIHFFRTVDQAVAGVENLSADTNIKGGTVFDVPLREDTRPVELASLLD* # PASA_UPDATE: g13847.t1, single gene model update, valid-1, status:[pasa:asmbl_3644,status:3], valid-1 NODE_215_length_31119_cov_41.9311 . gene 10230 13011 . - . ID=g13847;Name=g13847.t1 NODE_215_length_31119_cov_41.9311 . mRNA 10230 13011 . - . ID=g13847.t1;Parent=g13847;Name=g13847.t1 NODE_215_length_31119_cov_41.9311 . five_prime_UTR 12895 13011 . - . ID=g13847.t1.utr5p1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 12883 13011 . - . ID=g13847.t1.exon1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 12883 12894 . - 0 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 12431 12530 . - . ID=g13847.t1.exon2;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 12431 12530 . - 0 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 12226 12292 . - . ID=g13847.t1.exon3;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 12226 12292 . - 2 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 11655 11973 . - . ID=g13847.t1.exon4;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 11655 11973 . - 1 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 11122 11336 . - . ID=g13847.t1.exon5;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 11122 11336 . - 0 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 10727 10842 . - . ID=g13847.t1.exon6;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 10727 10842 . - 1 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . exon 10230 10526 . - . ID=g13847.t1.exon7;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . CDS 10450 10526 . - 2 ID=cds.g13847.t1;Parent=g13847.t1 NODE_215_length_31119_cov_41.9311 . three_prime_UTR 10230 10449 . - . ID=g13847.t1.utr3p1;Parent=g13847.t1 #PROT g13847.t1 g13847 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGYTIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDHIFRNVEVLIYVFDVESRELEKDMHYYQECLEAILQNSKDAKIFCLIHKMDLVQEDQRDMIFREREAELKCRSLPLQITCFKTSIWDETLYKAWSSIVYSLIPNVAQLEAHLQNFADIIDADEVVLFERATFLVISHSTRKNHRDIHRFEKISNIIKQFKLSCSKSQAQFQSMEVRNSHFAAFIDTFTSNTYVMVIVADPSLPSAATLINIHNARKHFEKLEGASFG* # PASA_UPDATE: g13849.t1, single gene model update, valid-1, status:[pasa:asmbl_3645,status:12], valid-1 NODE_215_length_31119_cov_41.9311 . gene 21724 25905 . - . ID=g13849;Name=g13849.t1 NODE_215_length_31119_cov_41.9311 . mRNA 21724 25905 . - . ID=g13849.t1;Parent=g13849;Name=g13849.t1 NODE_215_length_31119_cov_41.9311 . exon 25786 25905 . - . ID=g13849.t1.exon1;Parent=g13849.t1 NODE_215_length_31119_cov_41.9311 . CDS 25786 25905 . - 0 ID=cds.g13849.t1;Parent=g13849.t1 NODE_215_length_31119_cov_41.9311 . exon 21724 25622 . - . ID=g13849.t1.exon2;Parent=g13849.t1 NODE_215_length_31119_cov_41.9311 . CDS 21846 25622 . - 0 ID=cds.g13849.t1;Parent=g13849.t1 NODE_215_length_31119_cov_41.9311 . three_prime_UTR 21724 21845 . - . ID=g13849.t1.utr3p1;Parent=g13849.t1 #PROT g13849.t1 g13849 MTVTLKLPAFQLRVSAADQAKLQSRKRQIVQQHQGAKNEKATTWKAAVPPELWESVAPADRNFQEIIYELLLTERQYVATLTMISLAFRQPVLDGDIIPAALADQIFSNVEEVRQVNLRFLAALESRYRAEFPVVRGVDDIFVMFSESFSAYETYCGNQEAAFKMLMLARQKYPEFAKFLVECHKSPACAGLTLDGFLLTPMQRITRYPLLLKAMLAQKGCDANDVPDNAYIQKQQRSKKRGAGEDDGTDEHAALVNAYHSMMACVSAVNEAARRSDDSKRRRAEAAKAGDDLDPLARRRATISGPSMPRSVTSLGRHGVPMSGRSSSLGDTLIRPSTAASVESASASAVVGRSTPRSSLRVSSTQRRYQNVADDADDLDDDGDDALLKASEDVVQLKRERDALKNALSDATHRLHSLEGILGVSKLTVAQDAHPGEGRSEHVRSRATVRRHEVSVAARKPPLGVTWPHPQHTDAGGDETEGRSPDKKALRTVHLSVPGVSAHASSNSSATSSTSRHHRTRRQRSRSREPPHDDDDDAEEEGRGSSLSSATSRGRTPELSSLSRSATPTLPPISTPSRGATPVAGLKTSPIAHPASLSPSRRDGGAHTTAHDGGGGDGGRRGDTRQSSSNSLDRRFVGHELAVCSASDTDGEQKSARGLGIGVKGVAVHVSPPKTTAGPHGTLGIGAHAVPLVHVDAGAERHTLGVTNDNSSSSSEQSPRALPADPLSAHLPIGVHAQVHAQSTTSVVDAVMEEMNARLLRENADLRRRLHDLEVLQAGGTGHPGHSAKPNAHLAPLEVTVRRQGAHTVVLEPVVTPAGSSALNQSLNSTIVFDDSDPFDPLAEARAAAAADESIARCHGDEECDLVAEDDGDDEKALGDGGAQKRSPDKHAAGSAADSGSSGPSSAEMCDDEDSIVTDASAGAAGDAAATVGEDAGSTRSREIARITARDIRNAHRQFLAGHIEAAIEKASRCLTLLDDGTAAASDATEATSSSAANTTVPSDQGKLRVDLLCILSLCELRRGNHRRAKSLLKRARQVAGTTGNRVGSGKVYRIIASIRKREGNRDKAIAALLKAQDHLGATKGRGSGLAEVCISAAELMIEDKRRQEGAIAQMARAKVLVQELWDKPSASVAELGYRLGALMARVGNLADAEGVLAGCVEACERVFGVDNKYTIRARQGLRDVLGAAKKYKEAASVSRRIVKALSNTGQSNSPEFADAIVYLGAFEAAQGQPQSALKNLSTAYGIYEASGREVGEDKSAWASSIIEGSRRGTAPMRSRFGNLYENSDSITQYYKVY* # ORIGINAL: g13846.t1 original gene structure, not modified by PASA NODE_215_length_31119_cov_41.9311 AUGUSTUS gene 127 8266 . - . ID=g13846;Name=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS mRNA 127 8266 . - . ID=g13846.t1;Parent=g13846;Name=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 8126 8266 . - . ID=g13846.t1.exon1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 8126 8266 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 7775 7882 . - . ID=g13846.t1.exon2;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 7775 7882 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 7201 7394 . - . ID=g13846.t1.exon3;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 7201 7394 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 6791 6933 . - . ID=g13846.t1.exon4;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 6791 6933 . - 1 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 6430 6542 . - . ID=g13846.t1.exon5;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 6430 6542 . - 2 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 6032 6114 . - . ID=g13846.t1.exon6;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 6032 6114 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 5548 5778 . - . ID=g13846.t1.exon7;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 5548 5778 . - 1 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 5138 5369 . - . ID=g13846.t1.exon8;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 5138 5369 . - 1 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 4510 4680 . - . ID=g13846.t1.exon9;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 4510 4680 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 4045 4188 . - . ID=g13846.t1.exon10;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 4045 4188 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 3740 3826 . - . ID=g13846.t1.exon11;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 3740 3826 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 3380 3548 . - . ID=g13846.t1.exon12;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 3380 3548 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 3064 3162 . - . ID=g13846.t1.exon13;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 3064 3162 . - 2 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 2815 2909 . - . ID=g13846.t1.exon14;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 2815 2909 . - 2 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 2356 2490 . - . ID=g13846.t1.exon15;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 2356 2490 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 1909 2011 . - . ID=g13846.t1.exon16;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 1909 2011 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 1632 1735 . - . ID=g13846.t1.exon17;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 1632 1735 . - 2 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 1380 1426 . - . ID=g13846.t1.exon18;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 1380 1426 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 1001 1128 . - . ID=g13846.t1.exon19;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 1001 1128 . - 1 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 672 814 . - . ID=g13846.t1.exon20;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 672 814 . - 2 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 377 463 . - . ID=g13846.t1.exon21;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 377 463 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS exon 127 174 . - . ID=g13846.t1.exon22;Parent=g13846.t1 NODE_215_length_31119_cov_41.9311 AUGUSTUS CDS 127 174 . - 0 ID=cds.g13846.t1;Parent=g13846.t1 #PROT g13846.t1 g13846 MYFTHGWPRVFDANDGSKSPLISVKTNLDGSLFVSLSATTVYLWEDRPRALVASITRSKESIEEHGENVEVVWKFDSTVIAVTTTKDQILFFEDVSARFSSGARVYNMTEKASASSFTATPGMGEGAWVREHNLRLRGSCSIKDGITCVVSQREGVVVATVAGSLLPVRWSCAVDPEDIILLKDVTFADGTDGIPDNTIVCAMDYKRSINCFALVLSDGRALCILSTASGGKKGFWVGGVANATMIAVNAKLRLIAVGCEGGDIVVCQLDEVTHELRQLHWLSIPSENFPHVKPGRVSSLVWAADGRALAVAWQHCGLSVWSAFGSLLYCTLGYSKRSCDNETPSDVRRLSHCGFHALAWGREGYSLLAIPICSGGDSANDVPKSTARRRADVATGNEIVQFSLVKSALISNPVASNHNRLLLHGEDRIFYFAENGFPIDPQQPKSSDRLSDLQWQTVQLPLSYMVDNWPVRLAAVSDGGQFVAVAGRTGLAQYAIGTRRWKLFGNQNQASGKLCRVCGHEREISCKALAWWRDFIVVGCKNALTGTDELRWYPRSAPFDNASISHAEALERSLVLLNVHGDHLVVYTNDRTLTICTMHNDSENEVDVRYISTVILAEHIPPGIAVTSIALTTLFIEQGTRGPLTLLANVAGKVLMFDLPVLSMRGMENEVKMMSSPSVLASSVESLWIPPHSASPGRRHLSEAICMGCGSQGMKVWLPLFCDDEHNDGGINGLYRRIMVSFSLDFFPLCTYFGDAVVFGIVEETSFEHGDATTGFPFCVLEQKTFTYLHHILRQLLRRGMDRHAVSVARSCMGLPYFGHALELILHEVLEAEAETMIGFRSDALLPRVVDFLGQFPQFLEVIVHCARKTEVALWDYLFSIVGEPATLFDECLATKRFKTAASYLLILQALEPTSVSEQYAARLLETAMDNDEWE # ORIGINAL: g14002.t1 original gene structure, not modified by PASA NODE_151_length_34577_cov_41.8039 AUGUSTUS gene 19396 22353 . - . ID=g14002;Name=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS mRNA 19396 22353 . - . ID=g14002.t1;Parent=g14002;Name=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 22208 22353 . - . ID=g14002.t1.exon1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 22208 22353 . - 0 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 21939 22026 . - . ID=g14002.t1.exon2;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 21939 22026 . - 1 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 21686 21751 . - . ID=g14002.t1.exon3;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 21686 21751 . - 0 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 21306 21509 . - . ID=g14002.t1.exon4;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 21306 21509 . - 0 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 20746 20886 . - . ID=g14002.t1.exon5;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 20746 20886 . - 0 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 20263 20440 . - . ID=g14002.t1.exon6;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 20263 20440 . - 0 ID=cds.g14002.t1;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 19396 20075 . - . ID=g14002.t1.exon7;Parent=g14002.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 19396 20075 . - 2 ID=cds.g14002.t1;Parent=g14002.t1 #PROT g14002.t1 g14002 MARSALILTLFACVAAVALAGDVLDLTKANWDEITRKEDALLVEFFAPWCGHCKRLEPEYEKAATELLKNDPPIRIAKVDATVESELASKFGVSGYPTIKLFRKGEVAGEYQGGRDATSFVKYMRSQVGPSSKTIASAEELTRFLSNEDVSVVGFFDNESALYRTFLKAADKLRENFRFAHTLDAGVLAANGVSGSAVFVYQPPKLDPKGESTKQEFSGDNSVTDLEAFIYRASVGPCSHVTTENKDRFERRSKEDGLPLVTVYYNVDYRRNAKGTNYWRNRVLKVANEFAGKAIVAIGSESEFRGSLSQAGVEVREFVTVAEKNGKRFVRNGEFSVDGLRAFVAGVLDGSVEPYVKSEPVPQSQNADEAVVVVGKTFDDIVMDPTKDVLIEFYAPWCGHCKSLEPKYNELASKLKGEPNIIIAKMDATANEGHPAFAVQGYPTIYFAPANNKLNPKKFTGEREVEGFLKYLKQEATVENNIDAVISGAPEKKKKKKQEL* # ORIGINAL: g14000.t1 original gene structure, not modified by PASA NODE_151_length_34577_cov_41.8039 AUGUSTUS gene 11184 13220 . + . ID=g14000;Name=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS mRNA 11184 13220 . + . ID=g14000.t1;Parent=g14000;Name=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 11184 11219 . + . ID=g14000.t1.exon1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 11184 11219 . + 0 ID=cds.g14000.t1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 11433 11558 . + . ID=g14000.t1.exon2;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 11433 11558 . + 0 ID=cds.g14000.t1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 11979 12084 . + . ID=g14000.t1.exon3;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 11979 12084 . + 0 ID=cds.g14000.t1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 12343 12479 . + . ID=g14000.t1.exon4;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 12343 12479 . + 2 ID=cds.g14000.t1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 12597 12856 . + . ID=g14000.t1.exon5;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 12597 12856 . + 0 ID=cds.g14000.t1;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 13100 13220 . + . ID=g14000.t1.exon6;Parent=g14000.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 13100 13220 . + 1 ID=cds.g14000.t1;Parent=g14000.t1 #PROT g14000.t1 g14000 MYQAAAVGFNSQVDAYESSRPSYPPDAVSCVAARLGVTAEQGHVAEIGSGTGKFTRLFRPLVKCLTAIEPVAGMRQKFATILPNVPLLEGTAGNLPIPDSSVDGIVCAQAFHWFATENTLREFHRALKPTGAVALIWNTPDPSLEWMTHVRELANMYMGDNPQYFNGDWKNVFSTVTATSLFSPVRHDTFMGEPSLVTIDEIWKRQISVSFIAALPADEQERLRRRIYDYCLSLPAFTSGDSNARIEQRYKADVFSFAVRS* # ORIGINAL: g13998.t1 original gene structure, not modified by PASA NODE_151_length_34577_cov_41.8039 AUGUSTUS gene 2188 6731 . - . ID=g13998;Name=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS mRNA 2188 6731 . - . ID=g13998.t1;Parent=g13998;Name=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 6587 6731 . - . ID=g13998.t1.exon1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 6587 6731 . - 0 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 6274 6407 . - . ID=g13998.t1.exon2;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 6274 6407 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 5794 5962 . - . ID=g13998.t1.exon3;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 5794 5962 . - 0 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 5431 5598 . - . ID=g13998.t1.exon4;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 5431 5598 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 4794 5195 . - . ID=g13998.t1.exon5;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 4794 5195 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 4434 4516 . - . ID=g13998.t1.exon6;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 4434 4516 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 4071 4167 . - . ID=g13998.t1.exon7;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 4071 4167 . - 0 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 3809 3892 . - . ID=g13998.t1.exon8;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 3809 3892 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 3209 3601 . - . ID=g13998.t1.exon9;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 3209 3601 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 2188 2948 . - . ID=g13998.t1.exon10;Parent=g13998.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 2188 2948 . - 2 ID=cds.g13998.t1;Parent=g13998.t1 #PROT g13998.t1 g13998 MLWRPVPIVADPQPRPRHGHRAASVGLSMVLFGGGNDGIFNDVWVFDTVGGLWTSPPQSGHIPPGRAAYSLASDGSSLFVFGGMLEYGEFSNETYVLDAGTWTWRMISAGGEAPQPRIGASACLVGRQMYIFGGLGRTSGTPGAPCYLNDMHILDLDTCVWSSVACRGTLPQPRESHSCVVHAGRLVVFGGMNGRRLCDVAVFDTATNTWLSIQLGGSLPEPRSLHTAVVVNDKMFVFGGWVPAGGSVHSASHPSPYYRPPNTQNGVGSRPVTQPPQQQQQQQQQNAHTQAQPQPQTQPPQQSDSVTSTVSAVPHAAALQDSPARREWRCTGSVAVLNLVSMYWDAVKVGSTVGRFPKARAGHAAVTIGSRVYVWGGRDEYRRAWNSQICCKDMWMLETGRPPKPSSLLLSDRTSKSITLRWDPVDNTDGYRLQVRTTPDGPVWRDVCVARECHFIVTDYACGDDGKRDERAPSPHAASPETTVDSGIGTPGSSAASPLTTVDKGDDGSLIAAPDAHGVDERRMYLRADFAYVFRIAAVNACGQSDYSGEVVGCTTRNGAPGRIESAQWHPGGDDSLIVAWLPPKDLGSSPLLGYTVEAYGTDTADWKEVWRGLSTRVTVDLCVGTVHSAAHVTPHTSDSSPAVVAALSLSQKGVGRRGRPPRASHPLTASVHGNLSGGVGDLGDGEDLQRARKRAKTESWAVMGARSEETELDWSSVGAGLVLDGPSYSKLANRSSWAVREDFASEDEGAFACSVLSCAAVDRPMSGVLDEGMDDEQPGLLPIDESVDIADVSDSSPADGFMVSFEMPSS* # PASA_UPDATE: g14003.t1, single gene model update, valid-1, status:[pasa:asmbl_1844,status:12],[pasa:asmbl_1845,status:12],[pasa:asmbl_1846,status:12],[pasa:asmbl_1847,status:12],[pasa:asmbl_1848,status:12], valid-1 NODE_151_length_34577_cov_41.8039 . gene 23369 31747 . + . ID=g14003;Name=g14003.t1 NODE_151_length_34577_cov_41.8039 . mRNA 23369 31747 . + . ID=g14003.t1;Parent=g14003;Name=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 23369 27421 . + . ID=g14003.t1.exon1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 23369 27421 . + 0 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 27531 27652 . + . ID=g14003.t1.exon2;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 27531 27652 . + 0 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 27860 28018 . + . ID=g14003.t1.exon3;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 27860 28018 . + 1 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 28261 29409 . + . ID=g14003.t1.exon4;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 28261 29409 . + 1 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 29629 29991 . + . ID=g14003.t1.exon5;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 29629 29991 . + 1 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . exon 30210 31747 . + . ID=g14003.t1.exon6;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . CDS 30210 31311 . + 1 ID=cds.g14003.t1;Parent=g14003.t1 NODE_151_length_34577_cov_41.8039 . three_prime_UTR 31312 31747 . + . ID=g14003.t1.utr3p1;Parent=g14003.t1 #PROT g14003.t1 g14003 MIPLNKLWPQRRRTSREEDAAGGKQPTTKPFKAPLQTTRGPSIRVDHHVTSVISGLGQTTTGQGLCDLSDIGQFSPLDPTGTRPSGVDTANTRAYGQTRTVPGESTEILLRSKRKASPSGDRMQANQSAAVGSHGPFEHAKKLKLSAVTEQRKSKSLREYFVVPTETHSQKKVRTEDRHDECEKSACCGTDGTIHASESTANQHFKASQIPFAQVTRDTERAATPLANRHSRHHETDESSSPCIIADASDGSVFGDAQIDSWRANSEDDRPLVADQSVDNTVVCETVNRVIFCVPESPLIPPGDHVNLGSVNADGAVSAPVSDTVALSSDSCSPPSIHSSLSISLPESLTTIADQATLRSECMAATTPKMQSQVSIVSEFKDMSPAFALAFGSPPIFDLDDDRHGEFEGTAHDGRQQPERNHAARISPGEPYKASTPKGRSRESSFCALAYSPSFERQLASMLDDVSTLHEPPVCPAQTRAISLRPQPMRALGTDIHGGLASRELRVAQANIAVAESCTGPVVPISMGHRPEAREPPQDKPPAPHTHPKESDTEGDDSGPLQCPEGTESSKSDSHRQVSACSAADTHHVRMRLESLGLPLSVLNAYRARGIFSLYEWQAEALSLPGVARGLENLVYSAPTSAGKTMVAELLCVLRVIASGSAFSTAERKRKRDRRDMRFASARFRGRKRAIIVLPFVSIVTEKVKYLSSVFGAAGLEVAGFYGGKGPGLETAWDVAVCTIEKANGLVNRMLEEYGPDGICEELCCVVVDELHTLGDSSRGYILELLLTKVLAAGARAAAKNQPSAPSSGESGGSGTFVGTAANVPRIQIVAMSATLPNLDEFTSWLSARLYVTDFRPVPLTEFVLCGRRLIGLKHDVRELDRDKVVKSFAPPTGSTVSPKKGTGRSHIEPPYGEIEATLALCSETVEEGLSVLVFCAARAEVEKCAVKLAEMASWDCTTWPVRSALDGGPRGGRGDVPGGTQGWVDALDALVGRLRRSPSGLDSFLRATLPKGIAYHHAGLTTEEREEIEDAFARGIVKILVSTTTLASGVNLPARRVILKSIRSLVPYGGGRPDCMRYAQMSGRAGRKGLDTRGECVLVVRDADLPQVDYLLSATALPVHSCLLAHVQQGKASGANDLAVQRAVLEAVVCGIVTTPHDASAYIGMTLLAAQRGDAETSAATARAIESLVLSELVTIRSRAVGADSTGATPVGPLGRKDPTEMGAAVPRQDVSHMVTNHGCPAGAIPSADATTTGAVIEATRLGMATVAASLSPDEAVVLMRELTAARKHFILDGELHTVYHVTPVRGLSDSFSQEAWASFYRVYPTLSSQAHAVMEALGLHEGTLFALSQGRAQSEEVKARWRRFVSAVVLCDIVSEMPLAGVCNRYEIPRGAVQSLQQGAAMYAGMVTAFCERLGWDNMRSLFDSFQQRFDYGVASELCDLVRIPAPAMTRPRARALFNAGIKSVTHVLLAHAETVENILVAALPFESAVAANRSSLLVRSADTRETDTAAAVVGLRIKAEKEAAARILAGARAISEKEQREQDRIADELMGRTVSSDGGFVGATDALSNEDEALNHALHHAEADASEGVWGTVAAGADWTVVDCRDRPDALRELQEEAPRTEGEFAVAVSANGRSLAVTWGVGKRVYHVPFVVSLSAPMTQDAHSTTGEKGDAGAVVVGGKMHEVPLVETLRAVFGHASKVVTFRCKYALRALERMGIVLPGNVAVCDAIVSAWLLNHVADTKGASLDDIARAHLGFVVVDPAAALRRRNRTHEVCAAAVATLRLERLFAPRLLEIGLGGVYIDLEMPAMRVAVAMESHGILFDRRSWRACQAVARVAVSALEAECHRLAGRPFLLSSPDAVARVLYVDLGLNPHVGAVVVDGTGDDSWAVPGLPFESPSKLTLSRRSGLPSTQRDMLERMLQQEAAHPILAALLEWRRLYSVVSREIISVFADDGLQLDDSESESPNRVHPTSDLTATGRMSLSSPCVQHVPSAFCVVHPVAVAAIASQLGTPPLPGNIRGMSDSIVSLSHDTEGRASVTVNPRSAFIAPHGRVFVSADYSQLELRVLAHLSRDDRLCGILRTPGGDVFKLIAAAWMTCDGDSRDTSAEVTPEMRTRAKQLCYGIVYGMGPEKLAQDMGVSEATAARHMADFRARFPVMGEFCRQFVASCRARGYTQTLLGRRRALPDLTLSASVPPGGAKVAERRAQAERQALNTAVQGSAADLVMGAMVSIDRRVGGACAKGGSRGAHLVLQMHDELVYEVDQGVAVGWFAPLLREEMEAQAAKMGIVVPLPVVVRMGTCWGRMDVLSP* # ORIGINAL: g14004.t1 original gene structure, not modified by PASA NODE_151_length_34577_cov_41.8039 AUGUSTUS gene 32316 33426 . + . ID=g14004;Name=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS mRNA 32316 33426 . + . ID=g14004.t1;Parent=g14004;Name=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 32316 32346 . + . ID=g14004.t1.exon1;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 32316 32346 . + 0 ID=cds.g14004.t1;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 32466 32664 . + . ID=g14004.t1.exon2;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 32466 32664 . + 2 ID=cds.g14004.t1;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 32909 33059 . + . ID=g14004.t1.exon3;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 32909 33059 . + 1 ID=cds.g14004.t1;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 33325 33426 . + . ID=g14004.t1.exon4;Parent=g14004.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 33325 33426 . + 0 ID=cds.g14004.t1;Parent=g14004.t1 #PROT g14004.t1 g14004 MQESVLFVCLGNICRSPMAEAVFNHIVGERGEAAKWVVDSAATSNYNTGSSPDSRTVAVCKKRAVKISHEARQVTKEDYKRFKYILCMDNANLRDLKALRPKDATAHIALLGQWDPKGSIIIEDPYYGDSSDFVTVFDQCHRSVVAFLDDPNRDAPQSSS* # PASA_UPDATE: g14001.t1, single gene model update, valid-1, status:[pasa:asmbl_1843,status:3], valid-1 NODE_151_length_34577_cov_41.8039 . gene 14095 19157 . + . ID=g14001;Name=g14001.t1 NODE_151_length_34577_cov_41.8039 . mRNA 14095 19157 . + . ID=g14001.t1;Parent=g14001;Name=g14001.t1 NODE_151_length_34577_cov_41.8039 . five_prime_UTR 14095 14407 . + . ID=g14001.t1.utr5p1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . exon 14095 14887 . + . ID=g14001.t1.exon1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . CDS 14408 14887 . + 0 ID=cds.g14001.t1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . exon 15081 15997 . + . ID=g14001.t1.exon2;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . CDS 15081 15997 . + 0 ID=cds.g14001.t1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . exon 16159 16392 . + . ID=g14001.t1.exon3;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . CDS 16159 16392 . + 1 ID=cds.g14001.t1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . exon 16598 17957 . + . ID=g14001.t1.exon4;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . CDS 16598 17957 . + 1 ID=cds.g14001.t1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . exon 18231 19157 . + . ID=g14001.t1.exon5;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . CDS 18231 18599 . + 0 ID=cds.g14001.t1;Parent=g14001.t1 NODE_151_length_34577_cov_41.8039 . three_prime_UTR 18600 19157 . + . ID=g14001.t1.utr3p1;Parent=g14001.t1 #PROT g14001.t1 g14001 MAEQASHGTYNVSIAQLQGLVELKSDEGVRKLQTEYGGVEGLARRLGSDARAGLRSTDDLEGRQLFYGTNFIPPRKSASILELMWDALHDLTLIVLICSGTASLVLGVTPLEKHPEVGWIEGVSILIAVLVVITVAAVNDYQKEQQFRRLNAVKEDIMIKVIRDGRPTEVSTFDLCVGDVIRLEVGDVLTVDGVFIEGNDLKLDESSMTGESDLIKKDGDRPFLFSGTSVMEGIGKMLVVAVGPHSQAGIIMTLITGVKVEPTPEQEINAQVKAPVNPHHRGSAVDEHGIILEEIKGDNPPGSLSARSSIEDIVEDRKHQARLERRRSSLAAKTEKKEEEQEEDKSVLQGKLDHLAVQIGKLGTAIALLTVVIMALRFSIETFGIDGESWQSSYAKRYLNMFITGITVLVVAIPEGLPLAVTLSLAFSVKKMQTDNNLVRHLDACETMGSATTICSDKTGTLTTNRMTVMKSWIDGTVFDRPISPTHMSKAALEAICVGIAINSTAEVVVTGRGEPEQKGNKTECALLQLSSELGYEYSGIRASYHREKVYTFSSARKRMSAVAQMPNGTFRLFIKGASEMVLTLCTHVMTSDGERRPLEEAEKSQLLDKIIESFASDGLRTLTLAYRDYSATTNWSALDADLAETDLTLVTIVGIEDPVRPEVPRAIELCQHAGIVVRMVTGDNVTTARSIARKCGILSDENMLVMEGPEFRALVLRKDGSIDQEKFDEIYPRLRVLARSSPKDKYTLVSGAINSTVSVNREVVAVTGDGTNDGPALKRADVGFAMGIAGTSVAKDASDIILLDDNFNSIVKAVKWGRNVYDSIAKFLQFQLTVNVCAITVAFIGAVILEESPLTAVQLLWVNLIMDSFASLALATEPPTDSLLERKPYGRNKPLISRRMLLMIIGQSFYQLIVIFVLVFAGDKIFNVPSGRYNDLADPDDESPSQHYTIVFNAFVQMQMFNEINARKIHGELNVVKGMFDNPVFCFIFFGQFIAQAIIVEFGGRPFMCAPLTWEQWLACVVIGAISLPWGFALRLIPRARLPKWLTIGRAPSKPHLSRGQILWYRGLARLRAQLLAVNAFKAAMATRHRRLTYVMSPSGPGTYLSGHRPSSARASAV* # ORIGINAL: g13999.t1 original gene structure, not modified by PASA NODE_151_length_34577_cov_41.8039 AUGUSTUS gene 7662 10662 . + . ID=g13999;Name=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS mRNA 7662 10662 . + . ID=g13999.t1;Parent=g13999;Name=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 7662 7898 . + . ID=g13999.t1.exon1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 7662 7898 . + 0 ID=cds.g13999.t1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 8110 8825 . + . ID=g13999.t1.exon2;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 8110 8825 . + 0 ID=cds.g13999.t1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 9138 9352 . + . ID=g13999.t1.exon3;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 9138 9352 . + 1 ID=cds.g13999.t1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 9546 9670 . + . ID=g13999.t1.exon4;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 9546 9670 . + 2 ID=cds.g13999.t1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 9954 10115 . + . ID=g13999.t1.exon5;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 9954 10115 . + 0 ID=cds.g13999.t1;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS exon 10411 10662 . + . ID=g13999.t1.exon6;Parent=g13999.t1 NODE_151_length_34577_cov_41.8039 AUGUSTUS CDS 10411 10662 . + 0 ID=cds.g13999.t1;Parent=g13999.t1 #PROT g13999.t1 g13999 MASSIRTLPEDLRMGREHALLGSYDAALVYYEGAVQQIQQQIHRTADAMRKQKWQQLRQEVAEELGYVKQISNELASFKIDNGSSRRYSFDDETPADPDVWGPPPPIEKSPFANSPQRRPAVRQPSNQGQADRRSNATPTGNNGGGGGGGGHHRGQGQGGAAAASSVASAYSAAAAVRRPAASKAGNANARGNVIDARVAPKGAAVPRGYGGAGGAAMAGRAGRGANNAKGDGGKKGGRDDGEGESASPTPEDAGNKPAVFCPDGYDKDLVAALERDMVIRNPDVHWNDIADLKDAKRLLEEAVVLPLWMPDYFKGIRRPWKGVMMVGPPGTGKTMLAKAVATECGTTFFNVSAVTLSSKYRGESEKLVRLLFEMARFYAPSTIFIDEVDSIGSSRGKGDEHEASRRVKSQLLVEMDGVTSASEDSSKIVMVLAATNFPWELDEALRRRLEKRIYIPLPGVEGRRQLLQINLREVKLTEDVNLDEIAEMTDGYSGADITNVCRDASMMAMRRRIQGLTPDEIKILPKEELDIPTSMADFQTALKKVQKSVSQSDIEKYEKWMAEFGST* # ORIGINAL: g6521.t1 original gene structure, not modified by PASA NODE_7392_length_442_cov_180.88 AUGUSTUS gene 67 442 . + . ID=g6521;Name=g6521.t1 NODE_7392_length_442_cov_180.88 AUGUSTUS mRNA 67 442 . + . ID=g6521.t1;Parent=g6521;Name=g6521.t1 NODE_7392_length_442_cov_180.88 AUGUSTUS exon 67 442 . + . ID=g6521.t1.exon1;Parent=g6521.t1 NODE_7392_length_442_cov_180.88 AUGUSTUS CDS 67 442 . + 0 ID=cds.g6521.t1;Parent=g6521.t1 #PROT g6521.t1 g6521 TDHHSLQWLMTTNHQNRRLERWVAALGEYEFDVEHIPGRANTTADHLSRTPVDDAPDDLDDFLPTNLLEVHAIYAAEHATPTFSALEHELAYLLGAPTFAADLARAQRDDPSCAQWFRRLSTSPT # PASA_UPDATE: g3534.t1, single gene model update, valid-1, status:[pasa:asmbl_5351,status:12], valid-1 NODE_2984_length_4605_cov_44.4132 . gene 159 4495 . - . ID=g3534;Name=g3534.t1 NODE_2984_length_4605_cov_44.4132 . mRNA 159 4495 . - . ID=g3534.t1;Parent=g3534;Name=g3534.t1 NODE_2984_length_4605_cov_44.4132 . five_prime_UTR 4488 4495 . - . ID=g3534.t1.utr5p1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 4335 4495 . - . ID=g3534.t1.exon1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 4335 4487 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 4128 4204 . - . ID=g3534.t1.exon2;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 4128 4204 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 3812 3953 . - . ID=g3534.t1.exon3;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 3812 3953 . - 1 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 3540 3660 . - . ID=g3534.t1.exon4;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 3540 3660 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 3008 3314 . - . ID=g3534.t1.exon5;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 3008 3314 . - 2 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 2691 2795 . - . ID=g3534.t1.exon6;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 2691 2795 . - 1 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 2278 2390 . - . ID=g3534.t1.exon7;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 2278 2390 . - 1 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 1782 1843 . - . ID=g3534.t1.exon8;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 1782 1843 . - 2 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 1419 1535 . - . ID=g3534.t1.exon9;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 1419 1535 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 982 1092 . - . ID=g3534.t1.exon10;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 982 1092 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 584 798 . - . ID=g3534.t1.exon11;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 584 798 . - 0 ID=cds.g3534.t1;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . exon 159 322 . - . ID=g3534.t1.exon12;Parent=g3534.t1 NODE_2984_length_4605_cov_44.4132 . CDS 159 322 . - 1 ID=cds.g3534.t1;Parent=g3534.t1;3_prime_partial=true #PROT g3534.t1 g3534 MGIVNAGNLPVYDDIPADLLRLCEDAILNRDSQSTEKLLEYAQTHAKGAKKEEETEEWRKGDVESRLVHALVKGIEKYVVLDVEEARLNTALFVRPLHIIEGPLMKGMNVVGDLFGAGKMFLPQVIKSARVMKKAVAHLIPHMEKEREEALAKNPNLAPESRYAGTVIMATVKGDVHDIGKNIVGVVLGCNNYRVIDLGVMCPCEKILEAAVAEKADVIGLSGLITPSLEEMIYVAKEMERKGLSFPLLIGGATTSKTHTAVKIAPRYTKPVVHVLDASRSVVVVSSLLDNKVNTEFHDNVKDEYEEIRSEHYDSLKDRKFLSLEKARTKKARIDFASFVPVKPTFLGTRVFKDFDLNRLVTYIDWKPFFEVWQLRGKYPNRGYPKIFNDKTVGAEAKKVFDEANDLLRQIIKDKSLRCVGIVGFYPANTVGDDIQVFAPADDEARTTAVPINSFYGLRQQAEKEAEDDGAYRCLSDFIAPKDGGVRDYIGAFAVSCMGADELCAKYSTANDDYSIIMVKALADRLAEAFAEALHEDVRKSLWGYAAQEALDTQHLLQISYE # PASA_UPDATE: g1794.t1, single gene model update, valid-1, status:[pasa:asmbl_8723,status:12], valid-1 NODE_657_length_19438_cov_40.2485 . gene 12330 17473 . - . ID=g1794;Name=g1794.t1 NODE_657_length_19438_cov_40.2485 . mRNA 12330 17473 . - . ID=g1794.t1;Parent=g1794;Name=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 17471 17473 . - . ID=g1794.t1.exon1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 17471 17473 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 17288 17367 . - . ID=g1794.t1.exon2;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 17288 17367 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 17104 17189 . - . ID=g1794.t1.exon3;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 17104 17189 . - 1 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 16873 16983 . - . ID=g1794.t1.exon4;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 16873 16983 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 16688 16765 . - . ID=g1794.t1.exon5;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 16688 16765 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 16362 16448 . - . ID=g1794.t1.exon6;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 16362 16448 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 16070 16131 . - . ID=g1794.t1.exon7;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 16070 16131 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 15799 15879 . - . ID=g1794.t1.exon8;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 15799 15879 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 15539 15652 . - . ID=g1794.t1.exon9;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 15539 15652 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 15235 15310 . - . ID=g1794.t1.exon10;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 15235 15310 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 14923 15009 . - . ID=g1794.t1.exon11;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 14923 15009 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 14572 14654 . - . ID=g1794.t1.exon12;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 14572 14654 . - 2 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 14188 14310 . - . ID=g1794.t1.exon13;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 14188 14310 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 13727 13903 . - . ID=g1794.t1.exon14;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 13727 13903 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 13252 13344 . - . ID=g1794.t1.exon15;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 13252 13344 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 12847 12933 . - . ID=g1794.t1.exon16;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 12847 12933 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . exon 12330 12652 . - . ID=g1794.t1.exon17;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . CDS 12590 12652 . - 0 ID=cds.g1794.t1;Parent=g1794.t1 NODE_657_length_19438_cov_40.2485 . three_prime_UTR 12330 12589 . - . ID=g1794.t1.utr3p1;Parent=g1794.t1 #PROT g1794.t1 g1794 MLYIRGGTIVNDDEAFRGDVLVEGTTIKEVIRDFTKPFEIPAEATIVDATGKYVIPGGIDTHTHLQLPFMGTVAVDDFFIGTKAAVAGGTTMVLDFVIPSKGQSLVAAYDQWRQWADEKVVCDYSFHVAVTWWSEEVAKEMEALTTSRGINSFKMFMAYKNVFQLTDQELYQAFRRCKEVGALAQVHAENGDLIHEVSKKMVECGVTGPEGHMMCRPEEVEAEATNRAIVIANQANCPLYIVHVMSKSAADAISAGRKRGCVVFGEPIAAGLGTDGTHCWHHDWRHAAAFVMGPPLRPDPTTPQYLMDLLANGDLQATGTDNCTFNANQKALGKDDFRKIPNGVNGIEDRMAVIWEKGVTTGRLTPSQYVAVTSTNAAKIFGLYPRKGRIAPGCDADIVVWDGDATRTISAKTHNHACDFNIFEGMVVHGVAVKTISRGRIVYEDGKFNVEKGSGKFVPRLPFVGHVYDKVKIRDVVNIPRKIEREPYSGEVIVLP* # PASA_UPDATE: g1793.t1, single gene model update, valid-1, status:[pasa:asmbl_8721,status:3], valid-1 NODE_657_length_19438_cov_40.2485 . gene 10531 12068 . + . ID=g1793;Name=g1793.t1 NODE_657_length_19438_cov_40.2485 . mRNA 10531 12068 . + . ID=g1793.t1;Parent=g1793;Name=g1793.t1 NODE_657_length_19438_cov_40.2485 . five_prime_UTR 10531 10634 . + . ID=g1793.t1.utr5p1;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . exon 10531 10803 . + . ID=g1793.t1.exon1;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . CDS 10635 10803 . + 0 ID=cds.g1793.t1;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . exon 11061 11232 . + . ID=g1793.t1.exon2;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . CDS 11061 11232 . + 2 ID=cds.g1793.t1;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . exon 11903 12068 . + . ID=g1793.t1.exon3;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . CDS 11903 11969 . + 1 ID=cds.g1793.t1;Parent=g1793.t1 NODE_657_length_19438_cov_40.2485 . three_prime_UTR 11970 12068 . + . ID=g1793.t1.utr3p1;Parent=g1793.t1 #PROT g1793.t1 g1793 MLAMQMRSAALIVAAASLRVPASCASRAGILSLPGIRYYAAAASFKTPSFVPPPPREGFTVKDFLAAIGRKAEEHANKIPSWEALWAMSGRDFKAAGIPCESRRYIMSWRNKYYLGNELENRPFSLKRRRSKKKA* # ORIGINAL: g1791.t1 original gene structure, not modified by PASA NODE_657_length_19438_cov_40.2485 AUGUSTUS gene 2221 2805 . + . ID=g1791;Name=g1791.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS mRNA 2221 2805 . + . ID=g1791.t1;Parent=g1791;Name=g1791.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 2221 2805 . + . ID=g1791.t1.exon1;Parent=g1791.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 2221 2805 . + 0 ID=cds.g1791.t1;Parent=g1791.t1 #PROT g1791.t1 g1791 MLVITRQEEAVRAELDKKKAEQRAKRQEKERLRMERVRLREEARTGVTSRAPLAQTAVVVSVGESQALLAIAPQNVSIDKREKRATISGGEPQPQHQPPHKPQQQQQHQQQQQQQRRRRPLTKGRVNTPVKTQSTTALAHEQQRNGRASAASVDESVRRSKRERRAPKVFGDESSGGEGADVDLEPPRQRGRYE* # PASA_UPDATE: g1792.t1, single gene model update, valid-1, status:[pasa:asmbl_8722,status:3], valid-1 NODE_657_length_19438_cov_40.2485 . gene 2919 10236 . - . ID=g1792;Name=g1792.t1 NODE_657_length_19438_cov_40.2485 . mRNA 2919 10236 . - . ID=g1792.t1;Parent=g1792;Name=g1792.t1 NODE_657_length_19438_cov_40.2485 . five_prime_UTR 10116 10236 . - . ID=g1792.t1.utr5p1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 10011 10236 . - . ID=g1792.t1.exon1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 10011 10115 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 9729 9785 . - . ID=g1792.t1.exon2;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 9729 9785 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 9471 9635 . - . ID=g1792.t1.exon3;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 9471 9635 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 9080 9207 . - . ID=g1792.t1.exon4;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 9080 9207 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 8746 8890 . - . ID=g1792.t1.exon5;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 8746 8890 . - 1 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 8468 8544 . - . ID=g1792.t1.exon6;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 8468 8544 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 8104 8262 . - . ID=g1792.t1.exon7;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 8104 8262 . - 1 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 7641 7831 . - . ID=g1792.t1.exon8;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 7641 7831 . - 1 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 7376 7519 . - . ID=g1792.t1.exon9;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 7376 7519 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 6884 6990 . - . ID=g1792.t1.exon10;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 6884 6990 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 6505 6632 . - . ID=g1792.t1.exon11;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 6505 6632 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 6134 6221 . - . ID=g1792.t1.exon12;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 6134 6221 . - 1 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 5746 5908 . - . ID=g1792.t1.exon13;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 5746 5908 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 5213 5487 . - . ID=g1792.t1.exon14;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 5213 5487 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 4803 4971 . - . ID=g1792.t1.exon15;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 4803 4971 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 4425 4519 . - . ID=g1792.t1.exon16;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 4425 4519 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 4085 4211 . - . ID=g1792.t1.exon17;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 4085 4211 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 3708 3826 . - . ID=g1792.t1.exon18;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 3708 3826 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 3445 3559 . - . ID=g1792.t1.exon19;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 3445 3559 . - 0 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . exon 2919 3184 . - . ID=g1792.t1.exon20;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . CDS 3057 3184 . - 2 ID=cds.g1792.t1;Parent=g1792.t1 NODE_657_length_19438_cov_40.2485 . three_prime_UTR 2919 3056 . - . ID=g1792.t1.utr3p1;Parent=g1792.t1 #PROT g1792.t1 g1792 MAVEKAKEAAVATEGEKKPADTKKKDDKKKKLEELSEEDKQLKEELELLVERLKDADASLHKPALEALRTHIRSSTSSMTSVPKPLKFLRGHYGTMKDLHGKMPDGENKKFLADVLSVVAMTAQEDGKRECLGYCLAGSGDALGSWGHEYVKHLAGEISGLYDERVDTKQSVDDLTKLVMEIVPFDMKHNAEAEACDLLAEIERLDILEQFVDEDAHPRVCLYLTSCVDYVQSPENTQLLKTALGIFRKFNRYPEALRIATQLGDRDLVKQIFDSCPDRTVQNQLALMLGRQQLYIQSESESLNEWMANSHLSPQFLALARELDIVEAKVPEDIYKSHLEPTRSTFGASVDSARQNLASTFVNAFVNAGFGNDKLMTEEGNKWLYKNKDHGMMSAAASLGMILLWDVDGGLSQIDRFLYLTEDYIKAGALLACGLVNTGIRHDCDPALALLSDYVHHKSGIMRVGAIIGLGLAYSGSARDDIIEHMLPVLGDSNASMELVGVTALSLGLIAVGTCHAEITSTILQTIMEKSDAQLKDPYARFLALGLALLYLGKQEAAEVTLATLQAVSPTIGRLAGLLVDACAYAGTGNVLKVQSMLHECSDHFDKEKEQDDTHQAFAVLGIALIAMGEEIGAEMSLRSFNHLLQYGEPVIRRNVPLALAMLCPSNPKLNVLDTLSKLSHDPDAEVAHNSILALGIVGAGTNNARIATMLRQLAAFYYKDSNNLFMVRIAQGLLHMGKGTMTLNPYHSDRGIMSNVAVAGLLSVLVACTDIKSTILGKSHYLLYYLTPAMCPRMLVTFDESMKSVPVTVRVGQAVDVVGQAGRPKSITGFQTHTTPVLLGYGERAELATEEFESVTPILEGFVIVKKNKDYVAPVKDEEEQVSHRVEMSDMLE* # ORIGINAL: g1790.t1 original gene structure, not modified by PASA NODE_657_length_19438_cov_40.2485 AUGUSTUS gene 448 1310 . + . ID=g1790;Name=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS mRNA 448 1310 . + . ID=g1790.t1;Parent=g1790;Name=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 448 479 . + . ID=g1790.t1.exon1;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 448 479 . + 0 ID=cds.g1790.t1;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 565 658 . + . ID=g1790.t1.exon2;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 565 658 . + 1 ID=cds.g1790.t1;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 744 867 . + . ID=g1790.t1.exon3;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 744 867 . + 0 ID=cds.g1790.t1;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 963 1039 . + . ID=g1790.t1.exon4;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 963 1039 . + 2 ID=cds.g1790.t1;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS exon 1239 1310 . + . ID=g1790.t1.exon5;Parent=g1790.t1 NODE_657_length_19438_cov_40.2485 AUGUSTUS CDS 1239 1310 . + 0 ID=cds.g1790.t1;Parent=g1790.t1 #PROT g1790.t1 g1790 MLSEYEILQRRNIEANNAKLRELGLDAEQKAATRQLESPKVKATLKQRNPLPVLTVWPASRKSARLEGRPAVSVKGEDASSSDEDSIDEDLAHEETYTKEHLDALGDCKTEWRDFWFEDKKYSDHGTTCHQV* # ORIGINAL: g10833.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 10515 14909 . + . ID=g10833;Name=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 10515 14909 . + . ID=g10833.t1;Parent=g10833;Name=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 10515 10828 . + . ID=g10833.t1.exon1;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 10515 10828 . + 0 ID=cds.g10833.t1;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 10958 11513 . + . ID=g10833.t1.exon2;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 10958 11513 . + 1 ID=cds.g10833.t1;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 11602 13863 . + . ID=g10833.t1.exon3;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 11602 13863 . + 0 ID=cds.g10833.t1;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 14037 14483 . + . ID=g10833.t1.exon4;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 14037 14483 . + 0 ID=cds.g10833.t1;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 14781 14909 . + . ID=g10833.t1.exon5;Parent=g10833.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 14781 14909 . + 0 ID=cds.g10833.t1;Parent=g10833.t1 #PROT g10833.t1 g10833 MGPIDRFVTRDAVQVPADSMWERLGGDASQPTVEWRKAPYWTTGDLHSAASAKGPSRPSSGAAANAKTPSLQDIRNLLAQDGPPTRDVYQTEARASAQSQFDVDSEINKFLAERHKFGTNPQQAKRNVEELFTESRKSVAKLSDVWKARLDAFAKYRRQVIDLACINSIFVFACYKSKLLNRDQLLYDDVIQSTNANTSGILDVIRLNVVHELPKIFAVSSETDATTDLGLEGWLRGMSPHSWLFLPSVDSLRALWTGMRDVDFQQIDVLSVIFERLFVQSDSAAKDSGKVYTPRELIAFTLVAAGISADRASGGAPDVSDVLNVEKLKCDNPDEYLLGVKSFLDPACGSGGFLIKYTSIVVGKIRQLKDVWDDVRVLEHALLAIIDNVWGVDIDPVAWEVSLVNMLIQVLPIVWRIRDHNQGEKRVTIPPFNILNRDTLKGMTPNVAKNFEAKYRSESAKKQLKKRRRFDFVIGNPPYVTRDNTPDAFKTVDAIGFLDDKMRKVTQLHGFFYIYGAHHLKVDGGGVLAYVTPSSFLGNPKEERFCECILEDLRPTDVYCAPYHTFFGATAEVMVFVGRSPKVEESGDAVGYIYKPAVKGKSDSASVRNQTSACIAQWKSARNDRDDVILRAQAASTTKGKEISIAVINLTTLQTLLTDQKRDDARKLFCKLKTKGHHSCGSVASLLEGLCTKWASLADLFEGAGKDRKIIKKGVATVKTGLRTSKNDFFIFSPDSDLKGVADRERTKAYETFIRDAKEQRLLIRIFHDDDGHYSLPRPSSWVLLARGDLPKSSVVALYNKYIRAAIANKGILPVNQRPTKGSEAEKRAWLVADLKTAKKTKGDGKSKGGNDDDEAGDKGEKKKKGSDSVGDPERVELARAHIVVSKYPTSRNNSRKRWLRFMVVDSPNERVTASDKFQYVQPKKDGDGKAWNAYSMCAYLNSFIVDARLQRAQVNTQGNMRVLVADALNKFPVPGGDHATFDVCGRALVARYKKIIGVVEGCGVQFSSKSFSDLRTSRTVGAAFILRDTETKKQLTFAEAMAARDRFDVEQDSLAVDGTGDSASLFLSLLPEDLSLKTAQDLALTLDECARFQAIVDADAYRLAGFDEDKSRFIAEDFEYTQPQTVRVHLARNGYAAQDEGNVFVDFYGDGVEEAMQSLELTIGDAATSESEGDAGGPSASYYETETAAMDVDENTISTAPKPKRKRRVVDSDDEEEEDGNMSNVQTAKKGRKE* # PASA_UPDATE: g10832.t1, single gene model update, valid-1, status:[pasa:asmbl_1563,status:12], valid-1 NODE_142_length_35430_cov_44.2641 . gene 5091 6926 . + . ID=g10832;Name=g10832.t1 NODE_142_length_35430_cov_44.2641 . mRNA 5091 6926 . + . ID=g10832.t1;Parent=g10832;Name=g10832.t1 NODE_142_length_35430_cov_44.2641 . exon 5091 5130 . + . ID=g10832.t1.exon1;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . CDS 5091 5130 . + 0 ID=cds.g10832.t1;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . exon 5364 5715 . + . ID=g10832.t1.exon2;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . CDS 5364 5715 . + 2 ID=cds.g10832.t1;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . exon 5974 6926 . + . ID=g10832.t1.exon3;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . CDS 5974 6796 . + 1 ID=cds.g10832.t1;Parent=g10832.t1 NODE_142_length_35430_cov_44.2641 . three_prime_UTR 6797 6926 . + . ID=g10832.t1.utr3p1;Parent=g10832.t1 #PROT g10832.t1 g10832 MSTPNAPNRQNGQGKKEESNVTSATIFGAGALLGAAAVFIGAKIAESLWGNEDDAAEAHEAAYTSTARSTNSNHSNALGKASDAKCRPQNDEDEDPLSSFLCPITQEPMRDPVVTCYGHCFERAAIERWIRERGTCPMTKRPLALDKIYPCYSMKNAIEEMARRESDWKCELDRARTKIATTRHAQSHPTFNGHAVAASTLEAECVGSAECKNGAFASVGGHPSRYDVRLDARAVEWCFGEDLRRVDCVASYPPHSAYVLLPRLPALGLLPGESTGSQSGRRLGGGFLNAISSSLPISRAVSVVGTFSVTNEGDDAIELVSRDRDASGIIAGVITLPSRAKRIFSFGDTGLWCVEVRSLGGAAEAAARARASGVSAAQSAPVHVVVGDLKTEGGSLSDDALGMC* # ORIGINAL: g10838.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 33749 35430 . + . ID=g10838;Name=g10838.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 33749 35430 . + . ID=g10838.t1;Parent=g10838;Name=g10838.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 33749 35430 . + . ID=g10838.t1.exon1;Parent=g10838.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 33749 35430 . + 0 ID=cds.g10838.t1;Parent=g10838.t1 #PROT g10838.t1 g10838 MFKNLKDRLKAEIAAAPPNVVTQQQAGAAPPSPSIAPASPIPERAAVTSQPFDRDAAPTAESIAPQQAARENANGAAGGEGEGGLALPALNVETATREELVSALVRRTEKLRRYHGRINELIRTSRELAAKSELLERTLEKQQDVATRRIKELNEVHRLDVETKAALAEAFETRVRDKDAEIAALKAQVDVASTSSASVSADPELRIECERLCARLAEADKLAADHEAQLSLMRDSVASLQQSLEQNESRLAESSVLSASLDTAMKVAAERDDVIVALRSELSIIGEELAAERTAATTYKAHLAQSQVSIDELQSRLTTVNDELESLRATAQSSSHAESSIASLNEAVTEKDKALREAIEALSAARETVAVQGDDVRRLETKVQELSADKESTHGDLTQRISSMDERTNNLLKQLASAEAESSALRTANSGAQNSMESLRTESAASVERSEAEVARLSSVVAVAESEASGLKSEIAQLQERVSMAESSFADRDQATSALQEAFGEKQRALGAAEAALESARTTLAERESEIARVSAEASKAVSERDAASAELARVRESLE # ORIGINAL: g10834.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 15858 20663 . + . ID=g10834;Name=g10834.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 15858 20663 . + . ID=g10834.t1;Parent=g10834;Name=g10834.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 15858 20663 . + . ID=g10834.t1.exon1;Parent=g10834.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 15858 20663 . + 0 ID=cds.g10834.t1;Parent=g10834.t1 #PROT g10834.t1 g10834 MSDGQLAVVGPSLVGKTCLVQRFLTGSFSLRESTIGAEFRVRTIAVNGIPAFIRIADCSGNPAYASIADRYVRTAPVVMVVYDLTRPETLDAALAIVAGVREWSGSALVSGRNCKEFVLIGMKSDATESTLKGESAAAKAGRVAAAASGMLFFTVSARTGVGVNEAFVSAVSSYATRCHITLSGPTATVPVQGTSAASSQSRTQKPNRAHSGSVGSSGVNVSIFGNSKSAGGGTGHQGSSAASRNKPQPLPRQTSEGSADPPSSMSTSFTSSLRALRGSKRGHGKLGPPIVATDLQALELSGSGLPLPFDCVEAAPHTVGFAGVLTKKGHVIPSWRVRLFVLRDTLLYYYDQKDVSAPKGVIVLGATTTVEEWPDDGVHKFCLRLSVSNAYTRNEDYVISAPDDASRRSWIAAIGAAIAYAAEGHHIVDGPLSNPPSPTASPRRPSVDADGVSDADKRHAAIVLDGREHVRIVVEGDAVGFAPCTSGPSLHFGGPRVRWYARGATSLVAHLVHRGPDDKELKILLASEGGTPVRIALWAVPPKPPKRGMLPRSSSSVDEMASVGGGGSAAGTDCAPGTALNAIADYLEESGVRIAFPRVGRDGKISAANVGGVPDHQSVSCVRLMLECAHSAYAAACQALYTQPIPELVVDLASAMTAGKAMTQFSASGCSLTERDVRALLYPLRFYADARDVSLRRCRIGSTALALAVRTIAAECHGVRSLDLSGIGDALCAPEALAAIGGLAQLARVQTLSVANNGLTDGDVAPLLAAVAGRAHPTLDVLDLSGNLVGDGSCHAISRLFYSPGCPTSLILEANKITSAGCSAIVDLLREAVGEDATAHDVGSASHAQAHSHAEADARSHHHHHHHKQQHQQHSHVPPAHGDGSLRRASTASNSSAAPLPGASGGAAGVRNMRRFNLDGNGVLPTHRRTIARILRFHGALSRSAGSASAEDGGEQVAGESVGSSTTALQSSLEALSMSTLSAAHDVAAEVDLELAVVSLDRDGCCVYTQQWQARALGGAVPPGRRFDALAMDGAAAVLDIDPSASLSVCVGGGEVHVIAHAGDNGGVLRVQCDPNACSFSLWRSHVNARSNGDVSGGPTPLVTSFAVQERDFADVCSSLAMYASSMATRSARTPDAIEADFLRALAQVVPVLRNASNINNGALQFLAMLCSAASVPSEIASAASRSCDAFFDAVLLCALHGDGDAHDATTTERLPHAADAPLFEVLRSIVAAAAAICTLSRVAAPQHEQRAAALRMVLAEIGAHFACAVDGAAAIATECPVVLTFDSVVVLRAVTGLLVECAAASAAAIEGGVPSPGVAELVSRLGAVASNASKVVTAIVAGLHLTDPTPIASEATSSRVDTFAALTAKCSQAVAAGVAGGNGARLVHDASAWVFLPRGCVIAHLASHGATLAGSWMVSILSRPSRAALLHATGIRTLSSSSQPTAAGVVTPGPSICTVGGRGDEVDPSQYYADDGVPVMADTFSLVCHVVGSAHTCAAIALSKRSDALARATMRHVALAALIALSRGADRDADSDGQTVLSVVLRLHACMRRRADELRSKGGDEWRVSVVVDALPVLAAIVGEAVVRSNSVSNRISIEI* # ORIGINAL: g10835.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 21167 23308 . - . ID=g10835;Name=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 21167 23308 . - . ID=g10835.t1;Parent=g10835;Name=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 23229 23308 . - . ID=g10835.t1.exon1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 23229 23308 . - 0 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 22926 23048 . - . ID=g10835.t1.exon2;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 22926 23048 . - 1 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 22490 22691 . - . ID=g10835.t1.exon3;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 22490 22691 . - 1 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 22225 22305 . - . ID=g10835.t1.exon4;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 22225 22305 . - 0 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 21896 21967 . - . ID=g10835.t1.exon5;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 21896 21967 . - 0 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 21501 21536 . - . ID=g10835.t1.exon6;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 21501 21536 . - 0 ID=cds.g10835.t1;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 21167 21253 . - . ID=g10835.t1.exon7;Parent=g10835.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 21167 21253 . - 0 ID=cds.g10835.t1;Parent=g10835.t1 #PROT g10835.t1 g10835 MPFANLDKPEGLAHLNDFLADKSYIEGYAPSAADAVVFGALKSAPAATYEHALRWFNHITSYGAQKDSFPGEKKDLAAYGSAAATAAAAGKKDAAPAADEDDIDLFGSDEEEDEEAKKVKEARVAEYAAKKGNKPVIIAKSSLLIDVKPWDDETDMAEMEKKVRTIEADGLIWGQAKLIPIGYGIKKLQINAVIEDDKISTDFLEEQITGFEEYVQSMDIAAFNKI* # ORIGINAL: g10830.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 439 1454 . + . ID=g10830;Name=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 439 1454 . + . ID=g10830.t1;Parent=g10830;Name=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 439 638 . + . ID=g10830.t1.exon1;Parent=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 439 638 . + 0 ID=cds.g10830.t1;Parent=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 887 956 . + . ID=g10830.t1.exon2;Parent=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 887 956 . + 1 ID=cds.g10830.t1;Parent=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 1272 1454 . + . ID=g10830.t1.exon3;Parent=g10830.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 1272 1454 . + 0 ID=cds.g10830.t1;Parent=g10830.t1 #PROT g10830.t1 g10830 MAPFMRSRAGGAVDASGAAVPAGTGQLTNSGFALLSEMLAFDPSVRITPKAALAHDYFKEDPRPTMNAFEGVMVDYPKRSIIADDPKKPKQASLPAQPAHHVPSQVHKGPDSYGTAKHPASGPALGHPGKKLKTSGGGHVASSHGYSSQY* # ORIGINAL: g10836.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 25905 28276 . - . ID=g10836;Name=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 25905 28276 . - . ID=g10836.t1;Parent=g10836;Name=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 28130 28276 . - . ID=g10836.t1.exon1;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 28130 28276 . - 0 ID=cds.g10836.t1;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 27828 27941 . - . ID=g10836.t1.exon2;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 27828 27941 . - 0 ID=cds.g10836.t1;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 27296 27490 . - . ID=g10836.t1.exon3;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 27296 27490 . - 0 ID=cds.g10836.t1;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 26941 27081 . - . ID=g10836.t1.exon4;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 26941 27081 . - 0 ID=cds.g10836.t1;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 25905 26648 . - . ID=g10836.t1.exon5;Parent=g10836.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 25905 26648 . - 0 ID=cds.g10836.t1;Parent=g10836.t1 #PROT g10836.t1 g10836 MAFSFKWPEFSPELVTKAKEELTKALNAGDRHPSIADDIIVHDVHFGSRAPELVILEICDVSESRFRGIFKLSYNGDAYIVLHTKAQANPINPTRPRSAITKHGILAASKRLVVPLEIKISALRLHGIATLEVTRTKGITLAFKNDPLKSVTVNTTFDDQPSVRRHLQAVIEEQLRCLVNHTLPRLVHILSLGDKGKDAEPPGEWEPERTPYATPTTSPPPSRRPLSGHGAFSLHSATDSLIKTIVSDMIEEDERVVAVEACNHLTAHMGTLTAVRRTISPYAGLAPHVKHRGSGSVISDAPLMRSPRGSVQGVGGLSLGSPVSPTMTKPEGLVGSLQATTLRDAAFRNGLSTGPMIPTDGGSASSPKTHLSPSPSSSSVSVPLFKSSSLSSLSDSRLLHGEGLRAVVASRVPRSSIGVHTHNSIDQDAYVDILENLRENSSAELD* # ORIGINAL: g10837.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 29373 33082 . + . ID=g10837;Name=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 29373 33082 . + . ID=g10837.t1;Parent=g10837;Name=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 29373 30953 . + . ID=g10837.t1.exon1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 29373 30953 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 31063 31776 . + . ID=g10837.t1.exon2;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 31063 31776 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 31929 32213 . + . ID=g10837.t1.exon3;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 31929 32213 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 32358 32642 . + . ID=g10837.t1.exon4;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 32358 32642 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 32818 32907 . + . ID=g10837.t1.exon5;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 32818 32907 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 33023 33082 . + . ID=g10837.t1.exon6;Parent=g10837.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 33023 33082 . + 0 ID=cds.g10837.t1;Parent=g10837.t1 #PROT g10837.t1 g10837 MFKNLKDRLKAEIATAASDDTPTPLQSPTASPSVSSVSSRVNVASSPASTQPSVRESLSQSQVAPPQPQSAVSLGASASDASPTAEQQQQQQGAIERSASSQSDLDAPLSLPSLNVETATREDLISALVRRTEKLRRFHAKVNEVSKASKEINARNELLERTLEKQQDASSRRIRELNEVHKLDLEAKAALADAFRERLAEKDSDISRLEGELNIARRQTASVDALRRRTEDAQAESESLRVRLVDAERIASEAEASMSRMKESVAAMRDSLSEAEQKVSERWLACGRLEQQVIEKDAALKAATDKLAAADSSLQSLADLRAYRQSHEAKLVDVEGAREALARRVGSLEQMLGDAQRRAEELEVACARATGELKAFRHASAEKEAQMSHDADILRSRIAVLESSTAASASAASAAANASAGVDEDESGAGAGGVSAQLEALRGERAQLQGRLEELQSMLSQQSKKALEDSSALRGRLLSIESERDDALSAVRREQVKYDTERSALRTTADEAERRARAMEVERTALQARARDLQESVSSLESEKTSLEQQMRALRAAIASLEASQVDRDRTTDSLRDALAQREKAIAASDDALAAVRHTLRDREALLRRLESQMAEAEASLSACDGDMASMKGDLAASEELAGKLTLHVAELEERLVEGAAREAELRALAKTSEDALAELSAELRSVRQELDDASRECHAVRESATAAERAMREEVVVLNSEIAALRERIPALEESARQLAVAEADCVAARDEARELARANTSLKDEFHATSAELQSVIARLGELNELREGDRVIREELEKTLQESAATVDSLGVRADTADAEATHLRQRLDDANAEHQRSLKMHQQRIADLKRTLQRELKINPGDDSPTLPGAHRPQRQSSIAEECDDSSGSQTPPPGASNGHATPGDDAAALRRASEVARGSVSGSITSADGSFNFEYMQYVILKYMVGTESEVKHLTNVIGTMLKFTPEQWRLVRQAADQKKAGGWWGSGSQRANYNKIKK* # ORIGINAL: g10831.t1 original gene structure, not modified by PASA NODE_142_length_35430_cov_44.2641 AUGUSTUS gene 3586 4230 . - . ID=g10831;Name=g10831.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS mRNA 3586 4230 . - . ID=g10831.t1;Parent=g10831;Name=g10831.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS exon 3586 4230 . - . ID=g10831.t1.exon1;Parent=g10831.t1 NODE_142_length_35430_cov_44.2641 AUGUSTUS CDS 3586 4230 . - 0 ID=cds.g10831.t1;Parent=g10831.t1 #PROT g10831.t1 g10831 MVHAAETEHLFKVLIIGESGVGKTCLLVRFIDDTFTPSFISTIGIDFKVKTMTVNGHHIKLQVWDTAGQERFRTITTAYYRGAMGFLLVYDVTDPRTFANVKRWMEYISQHTSEKVDVALIGNKCDLVDQRAVTREEGQQFAIEHGLLFYETSAMDATNIHIAFEGLVTQITARLLVGPQPAPVGQPTVKLQESPSMSDGWQGRQKEGCGACKT* # PASA_UPDATE: g8856.t1, single gene model update, valid-1, status:[pasa:asmbl_5353,status:12], valid-1 NODE_2988_length_4586_cov_47.4937 . gene 1713 3800 . - . ID=g8856;Name=g8856.t1 NODE_2988_length_4586_cov_47.4937 . mRNA 1713 3800 . - . ID=g8856.t1;Parent=g8856;Name=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 3716 3800 . - . ID=g8856.t1.exon1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 3716 3800 . - 0 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 3520 3625 . - . ID=g8856.t1.exon2;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 3520 3625 . - 2 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 3150 3304 . - . ID=g8856.t1.exon3;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 3150 3304 . - 1 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 2820 2965 . - . ID=g8856.t1.exon4;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 2820 2965 . - 2 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 2481 2657 . - . ID=g8856.t1.exon5;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 2481 2657 . - 0 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . exon 1713 2359 . - . ID=g8856.t1.exon6;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . CDS 2114 2359 . - 0 ID=cds.g8856.t1;Parent=g8856.t1 NODE_2988_length_4586_cov_47.4937 . three_prime_UTR 1713 2113 . - . ID=g8856.t1.utr3p1;Parent=g8856.t1 #PROT g8856.t1 g8856 MDLRAVIAIEKYDAVLGIHAYRSGRLLQNCNVPYAIILGGTDVNEHHRDVFKAPVMGAAIKRAAAVVAFSECMARLARALWEPTLPPLLCIPQSGGPLMLASALDFRMSLGLSRDASVFLLSAGMRPVKDPTYLFDAVARWHAMNSNVHLVLVGPHNIETADSEDSESFADRIVRTAEERGGRNAGIIVTGALAHSDFLCALAASNALVNSSKAEGMSNSIIEAMALGIPVIARRIPGNESLIRNGETGLLFDTPSEFVEAADRLLTDEALRLGLTSRAQQCAMLRHNLQTERDGYTAVLQLLT* # ORIGINAL: g8855.t1 original gene structure, not modified by PASA NODE_2988_length_4586_cov_47.4937 AUGUSTUS gene 315 1812 . + . ID=g8855;Name=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS mRNA 315 1812 . + . ID=g8855.t1;Parent=g8855;Name=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS exon 315 419 . + . ID=g8855.t1.exon1;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS CDS 315 419 . + 0 ID=cds.g8855.t1;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS exon 660 810 . + . ID=g8855.t1.exon2;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS CDS 660 810 . + 0 ID=cds.g8855.t1;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS exon 1159 1275 . + . ID=g8855.t1.exon3;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS CDS 1159 1275 . + 2 ID=cds.g8855.t1;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS exon 1556 1812 . + . ID=g8855.t1.exon4;Parent=g8855.t1 NODE_2988_length_4586_cov_47.4937 AUGUSTUS CDS 1556 1812 . + 2 ID=cds.g8855.t1;Parent=g8855.t1 #PROT g8855.t1 g8855 KWKKFGASEGLKAGPDPASTSIGEEVFLTLTTKSKELDTPVEGSELTKKLAGHKMVQCRICKGEHWTTKCPLKDVLPMPAEDEDRPTEKAAPATPSSAGGSKYVPPSMRDGGNKRGESMNRGGRGGEGEDQATIRVTNLSEDTRESDLQELFRPFGPIGRIFLAKDKNTGQSKGFAFINFMRKEDGARAIENLSGYGYDHLILHVEWAK* # PASA_UPDATE: g5499.t1, single gene model update, valid-1, status:[pasa:asmbl_1110,status:3], valid-1 NODE_1292_length_12363_cov_53.8761 . gene 7881 11205 . + . ID=g5499;Name=g5499.t1 NODE_1292_length_12363_cov_53.8761 . mRNA 7881 11205 . + . ID=g5499.t1;Parent=g5499;Name=g5499.t1 NODE_1292_length_12363_cov_53.8761 . five_prime_UTR 7881 7945 . + . ID=g5499.t1.utr5p1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 7881 8035 . + . ID=g5499.t1.exon1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 7946 8035 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 8504 8587 . + . ID=g5499.t1.exon2;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 8504 8587 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 8878 9021 . + . ID=g5499.t1.exon3;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 8878 9021 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 9173 9370 . + . ID=g5499.t1.exon4;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 9173 9370 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 9654 9857 . + . ID=g5499.t1.exon5;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 9654 9857 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 10140 10277 . + . ID=g5499.t1.exon6;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 10140 10277 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 10506 10595 . + . ID=g5499.t1.exon7;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 10506 10595 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . exon 10778 11205 . + . ID=g5499.t1.exon8;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . CDS 10778 11140 . + 0 ID=cds.g5499.t1;Parent=g5499.t1 NODE_1292_length_12363_cov_53.8761 . three_prime_UTR 11141 11205 . + . ID=g5499.t1.utr3p1;Parent=g5499.t1 #PROT g5499.t1 g5499 MGANSDNELDDENDVIETSPNGRWQKLRRKVAQKDSSGIEEAHLAYDTEEGIEVVWNQITFSATKTQQNIENIKTKFANLIELKHNNVVKFYDFWVDQQRLVFITESMTSGTLKLYLRKNKKANIVISPKVWKRWCRQILSALMYLHDFVPPIIHGNLRCDSIFLQHNGLIKVGAVCLDDIRHHVRTVGIDTTQYMAPEQQNNTYSEKVDIYAFGMCALEMATGETPYAECTSVSELFKKVVAGEKPQALQRTNDPMLYDFVCQCLAPEQQRPAAAELLFHQFFNEVPALKVMSAHSILRHGLDADPLAKIPSEIQEFLDEVRVGAWGTLANVKLTERRSMSGSPKCEVASESDGVLQIVTTVLLPGGLQATSDVVLSREMTFNYRTDKDTPERAAQDMAVEGLVCVADIALVVDALTDALARHKMKHVTTATVAA* # PASA_UPDATE: g5497.t1, single gene model update, valid-1, status:[pasa:asmbl_1109,status:12], valid-1 NODE_1292_length_12363_cov_53.8761 . gene 377 3117 . + . ID=g5497;Name=g5497.t1 NODE_1292_length_12363_cov_53.8761 . mRNA 377 3117 . + . ID=g5497.t1;Parent=g5497;Name=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 377 542 . + . ID=g5497.t1.exon1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 377 542 . + 0 ID=cds.g5497.t1;Parent=g5497.t1;5_prime_partial=true NODE_1292_length_12363_cov_53.8761 . exon 682 826 . + . ID=g5497.t1.exon2;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 682 826 . + 2 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 1120 1277 . + . ID=g5497.t1.exon3;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 1120 1277 . + 1 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 1568 1680 . + . ID=g5497.t1.exon4;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 1568 1680 . + 2 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 1880 2023 . + . ID=g5497.t1.exon5;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 1880 2023 . + 0 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 2267 2350 . + . ID=g5497.t1.exon6;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 2267 2350 . + 0 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . exon 2690 3117 . + . ID=g5497.t1.exon7;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . CDS 2690 2935 . + 0 ID=cds.g5497.t1;Parent=g5497.t1 NODE_1292_length_12363_cov_53.8761 . three_prime_UTR 2936 3117 . + . ID=g5497.t1.utr3p1;Parent=g5497.t1 #PROT g5497.t1 g5497 TLYELEFNPGEDILGEVAAKSDVRNRIWAAAELIKAASVSSFALLRKTILAEPFFGVRAKVAGKLGNSKHPRASEILAALLDQETDPMALESVALACVDHRDSRVRDALVRFLQRESSGGPGSALPYRATAAALQALGAQRNADDFALLSAYANVDGHLGLVRSGALRGLGRLRSPQAHALLSQRLPYGQEQESCRPPAVAAYASSAAWLSSPVHIAEARETLVGLLRDTHSEKNIIVAAAQGLVTMKAEGVMDAIDQAKALIAEQDHPMMDRKKAALRAATPDSEAQKYRKEIESLEKKLRTLEDKVDTKLELATLQLKAGAATVTPATTATTTPTASAAASTASTAASD* # ORIGINAL: g5498.t1 original gene structure, not modified by PASA NODE_1292_length_12363_cov_53.8761 AUGUSTUS gene 3608 7605 . - . ID=g5498;Name=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS mRNA 3608 7605 . - . ID=g5498.t1;Parent=g5498;Name=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 7344 7605 . - . ID=g5498.t1.exon1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 7344 7605 . - 0 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 7017 7182 . - . ID=g5498.t1.exon2;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 7017 7182 . - 2 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 6217 6880 . - . ID=g5498.t1.exon3;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 6217 6880 . - 1 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 5776 5954 . - . ID=g5498.t1.exon4;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 5776 5954 . - 0 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 5503 5652 . - . ID=g5498.t1.exon5;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 5503 5652 . - 1 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 5209 5365 . - . ID=g5498.t1.exon6;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 5209 5365 . - 1 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 4387 4971 . - . ID=g5498.t1.exon7;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 4387 4971 . - 0 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 3911 4047 . - . ID=g5498.t1.exon8;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 3911 4047 . - 0 ID=cds.g5498.t1;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS exon 3608 3671 . - . ID=g5498.t1.exon9;Parent=g5498.t1 NODE_1292_length_12363_cov_53.8761 AUGUSTUS CDS 3608 3671 . - 1 ID=cds.g5498.t1;Parent=g5498.t1 #PROT g5498.t1 g5498 MGPATFTLRPGAWMACALVRVRVGVPSTGTARACVHWRRHMSTVGMADIAVPLDRIRNIGIMAHIDAGKTTTTERMLYYAGVTRDIGDVHDGNTVMDYMTQERERGITITSAAITFPWKGHRLNLIDTPGHVDFTIEVERSMRVLDGAVAVYDGVNGVEAQSVTVWRQATKYHVPKIAFINKMDREGASVRLSLESMERRLGAYPILTQLPIGSGPNFSGVVDLVSFDAIDFPSAGAAGPGSRGGVSRDLVRRPLAPSADAELYESALAARRSLLERLAEVDDGAMALLIDSDSRPPDAGHVVGAGCAPDGIAREQIVACLRRATIAEKCVPVLLGAAYKNKGVQPLMDAVVEYLPSPLEADPEVAEDSKGNPVRVHTSTEDPVVALAFKVQHDKQKGALVYTRVFSGAIDSRLNIYNSTRDVREKPTRVMLAFADELRDVESVTAGNIAVLVGLKSTTSGDTILSNNVDRKGRIRLKGLELPDPVFFCTIEPESAVYEPLLTKALETLQREDPSFSARTDEESGQLIMSGMGELHLDIIRDRIVREFKVPVSVGRMRVSYREAPITEVTVARDGVRQGHHGKRVQEACLTVSVMPTPGTGKPRFESQLPGASIAALNVLSISSVGAVNAARDGSLEACGRGGLLGYATEDVTVVLKELSAVPGHELTPAAIASCARSAVEEAMRLAEMRLLEPLMKVELVCDDQHVGSILSDLTGLRRAQVSGVHVREGTTRLIEADVPLRMMVGYASHLRSLTAGAASYSLHFSRYGQMSAHDQEEVVTALQGGY* # ORIGINAL: g2958.t1 original gene structure, not modified by PASA NODE_9205_length_340_cov_40.4226_potentialcontaminant AUGUSTUS gene 48 282 . - . ID=g2958;Name=g2958.t1 NODE_9205_length_340_cov_40.4226_potentialcontaminant AUGUSTUS mRNA 48 282 . - . ID=g2958.t1;Parent=g2958;Name=g2958.t1 NODE_9205_length_340_cov_40.4226_potentialcontaminant AUGUSTUS exon 48 282 . - . ID=g2958.t1.exon1;Parent=g2958.t1 NODE_9205_length_340_cov_40.4226_potentialcontaminant AUGUSTUS CDS 48 282 . - 0 ID=cds.g2958.t1;Parent=g2958.t1 #PROT g2958.t1 g2958 MQVRGNAPGRYMLTVVAPGLGMSVQANVTIGACDGRPTYSIDNEVLCDKESAAAASSSSLSGGVLAVAIVIPTIVGVG # ORIGINAL: g10175.t1 original gene structure, not modified by PASA NODE_2921_length_4735_cov_40.3088 AUGUSTUS gene 277 4623 . + . ID=g10175;Name=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS mRNA 277 4623 . + . ID=g10175.t1;Parent=g10175;Name=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 277 1350 . + . ID=g10175.t1.exon1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 277 1350 . + 0 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 1534 2270 . + . ID=g10175.t1.exon2;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 1534 2270 . + 0 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 2629 3049 . + . ID=g10175.t1.exon3;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 2629 3049 . + 1 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 3272 3388 . + . ID=g10175.t1.exon4;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 3272 3388 . + 0 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 3552 3655 . + . ID=g10175.t1.exon5;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 3552 3655 . + 0 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 3899 4013 . + . ID=g10175.t1.exon6;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 3899 4013 . + 1 ID=cds.g10175.t1;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS exon 4396 4623 . + . ID=g10175.t1.exon7;Parent=g10175.t1 NODE_2921_length_4735_cov_40.3088 AUGUSTUS CDS 4396 4623 . + 0 ID=cds.g10175.t1;Parent=g10175.t1 #PROT g10175.t1 g10175 MQPCEASAKALFERASTCIPQGRCVTYTSGAAGLDALGGKLVSLLWGAICALYPDAHVTQPNTTVDAVARMQREKEQHLDFMRSQASALTAQSKPLKSMQNYVSAIAGTPLGEASPPLLLVGPSGVGKTTLLSKFALDLVSERKEPPVVDPSPRNMDSAHPFAVGGEAAIHLTQRGIGSGGHDDTTFVTAQHVTGSGMVRRPSLVIPDTAFEDPFLFVHFCGPVPGSTDLRHVLYRLCHELRQFNLRLGLTRSRELRKPSENASNYDSAAHGDDGLFLGVDGVRSQGERADTSADYDADTGDLLGVPRDFKRLNEAVACELRRAGSKVGALLVFDGLNQLNDPHGLMWLPDPLPIGVKVILSSGPGDCVSSLRNRTDGLEHIDVAPLTDATAKEVLVARLSRCISPSSADDLRLPHAMRGPVSEAQVTELLQKTDAHLPLYLSVAAAEVRIRASRMFSAIDNRTAEIAYAKAIEELPQTIEHLFRSVLQRLESRFGRRLVGTCLCLMRLSRDGIYEHELPEALGAEGLPLPASLWRPLLAELSPYIRGGVSKAFGESPLDFFHRDLARAVSVRYLGDGSGDVDAVEKGAHERMVALFYGRADPRGDLSFIGVDTRAFSELPFHMQRCLDWDGIESTLCNLRFLQRKSEECLAYDLVRDYIACDNCDWTVGGGLPVTQDALARLSDYRRFFLSEVHVTSQRPYLMYQQALNQPDMTVVSIDAHALVGIAPSLFLPLSPRSEPSQMELSTSDAARKGAADHVQKLIPQQYLLHLNKRPDADPCRMVLGGHKNTVRCVAFSPDGSFLVSGDEGRALLVYDRYGECTRRPLRGHVGTISDCAVTNDGSKIVSSSSDGTVRKATDAARHGGYHGSTTSIHKAVLGNSSVDHPIAFVPNSGTYTLVLEGHTMAVRKCRIVFDGRILATASADKTVRL* # ORIGINAL: g5533.t1 original gene structure, not modified by PASA NODE_4318_length_1827_cov_29.6963 AUGUSTUS gene 141 1800 . - . ID=g5533;Name=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS mRNA 141 1800 . - . ID=g5533.t1;Parent=g5533;Name=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 1719 1800 . - . ID=g5533.t1.exon1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 1719 1800 . - 0 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 1444 1562 . - . ID=g5533.t1.exon2;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 1444 1562 . - 2 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 1245 1323 . - . ID=g5533.t1.exon3;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 1245 1323 . - 0 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 928 993 . - . ID=g5533.t1.exon4;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 928 993 . - 2 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 588 715 . - . ID=g5533.t1.exon5;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 588 715 . - 2 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 359 424 . - . ID=g5533.t1.exon6;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 359 424 . - 0 ID=cds.g5533.t1;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS exon 141 227 . - . ID=g5533.t1.exon7;Parent=g5533.t1 NODE_4318_length_1827_cov_29.6963 AUGUSTUS CDS 141 227 . - 0 ID=cds.g5533.t1;Parent=g5533.t1 #PROT g5533.t1 g5533 MGGPPPPPPPGMGGPPPPPGMGPPMAKGPPAKRKHQPNVPLPALNWVPIKQFDKTIFKELDDERIHGVVDYNMFEERFGTRPPTKKADLGAEDGTPKAKKVEGVSVLDPNKVRNILIARKQLSQPVDKIKDAISTFDLKVLHPEHVDLLVKMIPSPEEIATLKNFPEKEKLAAADAFMLEVVSVPRFDSRLRVMEFMAQFEEMIGSIRP # ORIGINAL: g8696.t1 original gene structure, not modified by PASA NODE_2446_length_6235_cov_42.1138 AUGUSTUS gene 100 3475 . + . ID=g8696;Name=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS mRNA 100 3475 . + . ID=g8696.t1;Parent=g8696;Name=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS exon 100 425 . + . ID=g8696.t1.exon1;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS CDS 100 425 . + 2 ID=cds.g8696.t1;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS exon 575 649 . + . ID=g8696.t1.exon2;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS CDS 575 649 . + 0 ID=cds.g8696.t1;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS exon 1111 1251 . + . ID=g8696.t1.exon3;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS CDS 1111 1251 . + 0 ID=cds.g8696.t1;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS exon 1541 2343 . + . ID=g8696.t1.exon4;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS CDS 1541 2343 . + 0 ID=cds.g8696.t1;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS exon 2671 3475 . + . ID=g8696.t1.exon5;Parent=g8696.t1 NODE_2446_length_6235_cov_42.1138 AUGUSTUS CDS 2671 3475 . + 1 ID=cds.g8696.t1;Parent=g8696.t1 #PROT g8696.t1 g8696 RVCTLGIGDNRVRCNIIAVGFGTILRYIGEGFRLENLVLKRQRNCAGTIERGAGLSVVHGFLIISHEYIATFRKIRGLSPQKHSSKANKRASTATPACGERVLRSREKRVPSAGHSAEEAPLHYATEVRTVPKGPASRTFRKPQPDETVWMIFEPSVSGVPCDSNGRLWPTMAEQCLGKMLLRYAREGMSFTQVTWTTSDQSHCEPVDDSQPMTCIPEVPRPLVVAPTATVESTGPLLFDVDGDTDAELEEMLGESAAETSDYELVRLRNIVKQNRVLRQLGIGGDAPMQRQAQGNEDRDDRPSVKAQMREKYAAGGDADVFDAEDACGDIGARVKRDTMRANGLAGIDLIRRSACVRARTAEVFVESTDADQPIRGRWNAPAASRTCLYFVPHKEICTVAPGKYRTTVPVCYADDDGEHEDADCRRIRREAAALRAFAKMSARKAASELAIGGVLVLGAMDVRCGRELIPLAAHIADDVVGLGLPLLLKEIVTVVPEKYTKRKSTTAESDGTAREQGMEGTSALRETGDERRNATSGDTDSTPALPKDSSEANGGTEKFPIATTPSDLRLRPRAAPALAGKGRKGVRVCEECTTEEGARDCSQATDGRATVTHNAPTTHAIGTCATPPADAGPLDCASRDACCEEPAATDPSVAPPNAARESPESSDAGTGGLLGWRPTLFPPGYSEAAPENETIPVVHAYYLVYAKVAAGFGV* # PASA_UPDATE: g8697.t1, single gene model update, valid-1, status:[pasa:asmbl_4326,status:3], valid-1 NODE_2446_length_6235_cov_42.1138 . gene 3690 6192 . - . ID=g8697;Name=g8697.t1 NODE_2446_length_6235_cov_42.1138 . mRNA 3690 6192 . - . ID=g8697.t1;Parent=g8697;Name=g8697.t1 NODE_2446_length_6235_cov_42.1138 . five_prime_UTR 6158 6192 . - . ID=g8697.t1.utr5p1;Parent=g8697.t1 NODE_2446_length_6235_cov_42.1138 . exon 5971 6192 . - . ID=g8697.t1.exon1;Parent=g8697.t1 NODE_2446_length_6235_cov_42.1138 . CDS 5971 6157 . - 0 ID=cds.g8697.t1;Parent=g8697.t1 NODE_2446_length_6235_cov_42.1138 . exon 3690 5749 . - . ID=g8697.t1.exon2;Parent=g8697.t1 NODE_2446_length_6235_cov_42.1138 . CDS 3987 5749 . - 2 ID=cds.g8697.t1;Parent=g8697.t1 NODE_2446_length_6235_cov_42.1138 . three_prime_UTR 3690 3986 . - . ID=g8697.t1.utr3p1;Parent=g8697.t1 #PROT g8697.t1 g8697 MNSQQYSFVSLYVGDLHADVNEALLFEIFNAVGPVASIRVCRDAIMRRSLGYAYVNFHNPVDAERALDTMNYAPIKGRPCRIMWSQRDPSVRKSGVGNIFIKSLDKTIDNKALYDTFSAFGNILSCKVVQDENGSKGYGFVHYETQEAADQAIAKVNGMLLNGMQVFVGPFIPRKERASAQGEAASRFTNVYVKNLAPEIDESKLREKFEAFGPITSLTIMRDAENKSKGFGFVCFDGHESASKAVEGLNGVEIDGKPIFVSRAQKKAERDAELRQKHEALKAERMNKYQGVNLYVKNIDETVDDERVRQEFSAFGNITSAKVMRDDKGNSKGFGFVCFSSAEEATKAVTEMNGRIIVSKPLYVALAQRRDERRSQLAVQYAQRNPGMRMQPGAMGAGGPMFPQAQGPFLYQAANMGGPGQQRAAAGMMYPQQMAMRPRWTAPGGAQQPRPGFGGMPAGGYMVPPGGQRSQGGSGRGRAARAPQAGAGQRPPANGVVNGGLGQPVGAPGVGGVQGNRRAQQQQGAFKFASNVRNAGVAGGIPTGPQASVPPMAPGQEPLTASLLASASPELQKQMLGERLFLSIQPLQPELSAKITGMLLEMDNSELLHLLESHEALTAKVDEAVSVLHAHQVQHDGEPIAIGDDKGEK* # PASA_UPDATE: g6654.t1, single gene model update, valid-1, status:[pasa:asmbl_6076,status:12], valid-1 NODE_3446_length_3448_cov_33.0056 . gene 2 1010 . + . ID=g6654;Name=g6654.t1 NODE_3446_length_3448_cov_33.0056 . mRNA 2 1010 . + . ID=g6654.t1;Parent=g6654;Name=g6654.t1 NODE_3446_length_3448_cov_33.0056 . exon 2 97 . + . ID=g6654.t1.exon1;Parent=g6654.t1 NODE_3446_length_3448_cov_33.0056 . CDS 2 97 . + 0 ID=cds.g6654.t1;Parent=g6654.t1;5_prime_partial=true NODE_3446_length_3448_cov_33.0056 . exon 394 1010 . + . ID=g6654.t1.exon2;Parent=g6654.t1 NODE_3446_length_3448_cov_33.0056 . CDS 394 663 . + 0 ID=cds.g6654.t1;Parent=g6654.t1 NODE_3446_length_3448_cov_33.0056 . three_prime_UTR 664 1010 . + . ID=g6654.t1.utr3p1;Parent=g6654.t1 #PROT g6654.t1 g6654 RSGVDRHLFAMRCVARGDLYDGGNTSVHHPGLAKTPSIFTDAAYSTLTTTLISTSSLSAASLAQFGFGAVDSDGYGIGYCVEDNEIIFTVSAFRSKLRTTVPRFRLELIRALRDIAALKPQ* # ORIGINAL: g6655.t1 original gene structure, not modified by PASA NODE_3446_length_3448_cov_33.0056 AUGUSTUS gene 2222 3331 . + . ID=g6655;Name=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS mRNA 2222 3331 . + . ID=g6655.t1;Parent=g6655;Name=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS exon 2222 2349 . + . ID=g6655.t1.exon1;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS CDS 2222 2349 . + 0 ID=cds.g6655.t1;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS exon 2523 2669 . + . ID=g6655.t1.exon2;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS CDS 2523 2669 . + 1 ID=cds.g6655.t1;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS exon 2932 3171 . + . ID=g6655.t1.exon3;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS CDS 2932 3171 . + 1 ID=cds.g6655.t1;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS exon 3319 3331 . + . ID=g6655.t1.exon4;Parent=g6655.t1 NODE_3446_length_3448_cov_33.0056 AUGUSTUS CDS 3319 3331 . + 1 ID=cds.g6655.t1;Parent=g6655.t1 #PROT g6655.t1 g6655 MTVAEAAVPTDKQRVIEVTVVATILLETEMESGVADGRRLREMSRSRSPAVRKPADLKSMVSRSPARDGRRSRSRERSPRDDGGRGGDWRKREENPNVAAGNGSRGYGGGGGGGGSRGYGGGGGGGAPGGFRRGEIPPEGFFVERLHLREELYKRDDKTVWAASPSPPASDAVFV* # ORIGINAL: g11707.t1 original gene structure, not modified by PASA NODE_797_length_17602_cov_53.1393 AUGUSTUS gene 12854 17026 . - . ID=g11707;Name=g11707.t1 NODE_797_length_17602_cov_53.1393 AUGUSTUS mRNA 12854 17026 . - . ID=g11707.t1;Parent=g11707;Name=g11707.t1 NODE_797_length_17602_cov_53.1393 AUGUSTUS exon 12854 17026 . - . ID=g11707.t1.exon1;Parent=g11707.t1 NODE_797_length_17602_cov_53.1393 AUGUSTUS CDS 12854 17026 . - 0 ID=cds.g11707.t1;Parent=g11707.t1 #PROT g11707.t1 g11707 MSNAERDRRRATATSARGSGVQDDETEVTTMEGVESNQPNEHGAARVTRGSLKRKHDVAAGSAPTDSVRGGKRAKLATSAGSDVPPLSEAASVESIRLLFDGLITTFPTDFHERYRRAVAEVLQSKPTSRRGRFQPSQTMPDELVDLAFAVMDLIKDESMRSKYAPCIHWLIKRYPGDCRGLKYYEIEDATSSRGGYWRGDFIGWEQGERKTLDLRVSIPPGVAVVPARILFLVKTVRAEGVDANFAALNPDGFHMEFEVLNSEGQRVCTKTVKLTSAHGSSDIVPLTHAACAIICNRIRDRRAAPQTLVLSPIGDGADSHGLIVKVSAVLFCASAPNRLNTPTILFWRCGEAITKNAPLPLESIQDLFCLAANATSVSSQREMRRALVTVALESAEGEDQSELVRVLVSIVPYDAHDKEDCIKVISAIVNPERGSTDESIASVVSTQRAIVETMPLSGLEAALLVRDRGDFFNFMGITVVCEFPALATTIFARLSKISPVWDIWKLTDSTLAVDACATGNTELLKMVVEAKGVESLRLSASTGMTAYHAGVVEGKMSTEMREFIFRALAGAKGPNGMPTKENLHELARYIAVDCVEGDTDLWVSPEGSQLLRKVFATADARAQMIAELLECVLIGLGPQGFAWPDNDDSMAELEDEADEVFLEAHCACSLAILAAALDHPLCDSDRMEPEVSGERYFPTPETAEKISKAAERLVEYFPVSRVSAMMDSPHLFLADALLAIFHSVQMCAPDLALRGKWIPEFFSILLCVMADKESVGDLVNMFAAIDSRVNVGGNVCLRVILASVPTVVENVKKAGEQFVQAWVRYLFDRCADEFDSQMNEDAFQLTIDRDNVIESALVSPIMTAEKINPHLFSARFEGELGKGPGVVTAALTTITRELLSAREGLFVSRHVLTGVYPSEMAKSERNLREFEMFGRMLASAVARREPMDAHLAPAFFAHFLAPFEFGRKFDDLALVDPDLHLSLCKHVRDVVLDAPLLELLGDPCFTRALPSGLEVELCPGGKTITLTDANKMQYLDLTAQSILRDGVEDQMGAIRRGFSTVGAEPSKSAILVLLPPDVLAKTVCGHQNLTGIELRRLAVHLRNIAPPSQPAAPNAPVLEEGVAPAVAAPVVQARPALRRSVRISNNNNNNNNSNNNNAADNRRTGAVSRTPQVRMVGGRAALVRGMAAGVPAAAATPARPARNRPTRQTAPLHMPRAVRLALLGLAGGGDDDDDDDDDDDDDEFDEDEFDDLDLIDEMEDDNAWALLNGPAEANRSNAPLADMHPAIGMFWRWVDGLSPERMADLLEFVTGSRRMPPEAMALAQNGGALDEEAAQFKIEICVDMRMGKDVYPIARTCSRLLVLPPYEDEAQLNAKMSEAIAHCHDFGFV* # PASA_UPDATE: g11706.t1, single gene model update, valid-1, status:[pasa:asmbl_9420,status:3], valid-1 NODE_797_length_17602_cov_53.1393 . gene 7895 12487 . + . ID=g11706;Name=g11706.t1 NODE_797_length_17602_cov_53.1393 . mRNA 7895 12487 . + . ID=g11706.t1;Parent=g11706;Name=g11706.t1 NODE_797_length_17602_cov_53.1393 . five_prime_UTR 7895 8063 . + . ID=g11706.t1.utr5p1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 7895 8992 . + . ID=g11706.t1.exon1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 8064 8992 . + 0 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 9191 9348 . + . ID=g11706.t1.exon2;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 9191 9348 . + 1 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 9511 9600 . + . ID=g11706.t1.exon3;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 9511 9600 . + 2 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 9740 10000 . + . ID=g11706.t1.exon4;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 9740 10000 . + 2 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 10161 10512 . + . ID=g11706.t1.exon5;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 10161 10512 . + 2 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 10653 10755 . + . ID=g11706.t1.exon6;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 10653 10755 . + 1 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 10914 11207 . + . ID=g11706.t1.exon7;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 10914 11207 . + 0 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 11353 11743 . + . ID=g11706.t1.exon8;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 11353 11743 . + 0 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . exon 11884 12487 . + . ID=g11706.t1.exon9;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . CDS 11884 12224 . + 2 ID=cds.g11706.t1;Parent=g11706.t1 NODE_797_length_17602_cov_53.1393 . three_prime_UTR 12225 12487 . + . ID=g11706.t1.utr3p1;Parent=g11706.t1 #PROT g11706.t1 g11706 MASFVPGAGRLTAEDVELAVRQLQALDNLSAQRLGQLQGQSRGAVPSLAAGIPAYAQHMLDSGHRSRLSPPFEVPSTPDDDSAATTPSFAFPANSMDLVLKSEEGVNGLDFAELDRFLAEQLMAGTGQAQDFGVAYGGSAATGLVPEQQQQLLQQQQLQLQRRQFIAQQQQQQQQQQQTVLPAVLPQQLVQQHQQTPQLTQQQLLLQVQQHAANGTPVEIPDLLLISDQPVQFGRFRYKSEQRERSLDGEKSCPEVMVNPKYLSTVPADAVVSASLVTKTVGPDGRPLPHWHELGGNTASLLSGPERKARFENLVILIEKTNNSRVQRNKEDQRAVRIQFQISFTSGNRTYFGKVVSHAVYNAKLMINRLSHPTGPVNGGNSIILLCSKVRKACTTIRISERSAPHSANVFEAQTGNWNDGVCVMSANQLSFHHQFAIVFAMPAYHDSTITAPVVVDIEIIDHADKTNSQPVEYMYMPSEESRLVVAQASKKRKYDDGMNDFWRHFGLGGMGGMGGMGGDPSGGTGGGMGGGMFGGGMGLGGGFSYGQQHGSSAGPAMDVLALHAQGMRFFAHTGDARYLLAAQRGLIGMADDDGNTALHHAIMEGRADAAVSLASVAFPDVISGPNNAGDTPLHLAVERRLVSVVERLLECGADVSVRNAMGNNPLHLAARQPGLGIVERLVDSRVHGLASALSVPNNEGVHAAHVAVVARQPEALACLIIAGADINARDMCSGWTCLHYAAALGLSPIAVLLLKAGAKVSVLSHSDQTPLHVAAASGCVCVIEELLCAGASPADPDGFGLTPMDAAADLVGRPSYERIVLLMHEYASQGKVFSRMSSTEPGHEDESVAQEGGVSSKKGDSGDDFSDDYVMLPESLKDVKISDADLRIGKRRVQGNQPAGSKITRKLMAALGDDKDDKKDRSKAKRKMMGHSAAADATGAAKLAALASVALDQHGKVSMDNADGVSLMGVD* # PASA_UPDATE: g11705.t1, single gene model update, valid-1, status:[pasa:asmbl_9419,status:12], valid-1 NODE_797_length_17602_cov_53.1393 . gene 1077 7221 . + . ID=g11705;Name=g11705.t1 NODE_797_length_17602_cov_53.1393 . mRNA 1077 7221 . + . ID=g11705.t1;Parent=g11705;Name=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 1077 2485 . + . ID=g11705.t1.exon1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 1077 2485 . + 0 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 2791 4546 . + . ID=g11705.t1.exon2;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 2791 4546 . + 1 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 4719 5708 . + . ID=g11705.t1.exon3;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 4719 5708 . + 0 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 5892 6123 . + . ID=g11705.t1.exon4;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 5892 6123 . + 0 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 6336 6526 . + . ID=g11705.t1.exon5;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 6336 6526 . + 2 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . exon 6681 7221 . + . ID=g11705.t1.exon6;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . CDS 6681 7022 . + 0 ID=cds.g11705.t1;Parent=g11705.t1 NODE_797_length_17602_cov_53.1393 . three_prime_UTR 7023 7221 . + . ID=g11705.t1.utr3p1;Parent=g11705.t1 #PROT g11705.t1 g11705 MASTEREAAAVATVVLERARKESVAINIVEIACPTSPVQSVVTFEDAAHHGAVVVENGGGNAQPAVIPLSRTQNDEGEEIITDPSQLPTYINQWTLTFRCSEIETEYRRARLPLLLRTIRLCLWCIFVVVWVLFFAAYFNLWASEKNDTYRRISFLYIVGTGIALALQLLSYTPWFKRRLHLYTYTLLVPCAILLGALLFVPRGIADEGAVSSALILALIGFVLSMERFLITTMILLSYVGAFVIQVLSSSNNNTSQFVQAIVPLVAVSFFPCLAAHKIDKRSRELWLAQRSVDDRNKSLSGEKEHMERLLKFQLPESIIAKLKGGESRRAGSALSYRFDAVTVAFVELSGWHDVMHTVEPADAVAILNAIFTRFDTLVEQSGNAIEKIKTTGSMYMVASGVPNPVGDHACAVAEWALRLLADWKSGKTKAHRGLDIKVGMHSGEVVGGIVGDLKFCYDIYGDTVNTASRMCKFGTLNRIQCTRRSQELLAETRLFVVEYAGSKDFKGKGELETFLVLRRSTDPDSDAESDEGEDDMGRRGSAASVELLEAHRAAMAAKQRKSAHGHVRNQSSGSFGRLSKWFLQKGARHSVSKSLTMHTLAVKSFSEIALSSVERKRESSRPQVSRNGSAASITTASSADDLGMATDASHMSSTGNMVSAHKAVAGSSGSLGGSVWPAMEGPYTPRGPDRRPLRVSVQEAMRRLAASLHSLGSIGSLEGDAAADAAVESVRGKTTAPNNMSLSRASGDRGSGRTVGGSHVRSHSAASLSDIRSSPSLSRSGQSQSRDISTREVGDAVNTNNTTTTTNNNSNTRLLPMHRRAASENDIVLLATGTPEDSPECSSGEDVGGVSVSAKLDLFNDRQRMSRMRSKSVSEKRRHPERTTDAVTAEHPARTADAVTADNAGTIPADESKPEVLDDVAAVAAASLASTMSRAALSRAASYVRRDSVVPPQMSPQVNRLQHEFHRQQSMLAASMHSSEGVAALEAMLETSSSNVGSPKTGVAAAGAPAQRMSVSLSSPAAFVGSDGGSRHERRRPSARTTDAIFHRRDAVYKVLGGSDNIGRVATLMAKRPNRWTLRFDDPALEASFARARNFRSHRVTVVHMVAAWLFMMVCVSVEATSGMDAARLATLASVRVLVGTAIFLLPVAILTGRLRLDGCFSCCGAFVALFGPCACACRHPVDRTPSGSLHSSHDMLEVSFESNAGALPAGILDVDGNQDRVKRRAAGSIGGGNYANSPAPPSSRRPAFSEALRSQIVVVVFLSLYIVLSVALVIGCGSFMSADYWSPGTMVQYLDVVLVSAPGLTLRTLSWMVSVFAVAAICMKASFPDEYSLFSLLVGLIGMFIAVCTQYVFERHERRQFLLDAVAVEQEKEIREEKLLGEQLLHNILPPSIARMLSEQSSSSTARQFDAVTVLAMDIAGFTLMSTEMAAPEVVFLLNSLFNGFDALVRLLRVEKICTIGDAYVAASGVPEPCPDHADRTCRLGVEMLRVVAMYNAAHRPKRPVQIRIGVHTGSCVAGILGGKIRFKYDLYGDAVHVASCLEQTGRAGCVHISQATADLVDLNELAKSHRMVVDRGDELIRVAVSGVERDIGTVLVHPSRIRIPSGRGGDVAAAANGAHGTAGSSRMSSVHSSPHF* # PASA_UPDATE: g9979.t1, single gene model update, valid-1, status:[pasa:asmbl_6106,status:12], valid-1 NODE_3474_length_3389_cov_38.6545 . gene 24 2930 . - . ID=g9979;Name=g9979.t1 NODE_3474_length_3389_cov_38.6545 . mRNA 24 2930 . - . ID=g9979.t1;Parent=g9979;Name=g9979.t1 NODE_3474_length_3389_cov_38.6545 . five_prime_UTR 2895 2930 . - . ID=g9979.t1.utr5p1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . five_prime_UTR 2438 2453 . - . ID=g9979.t1.utr5p2;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 2895 2930 . - . ID=g9979.t1.exon1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 2334 2453 . - . ID=g9979.t1.exon2;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 2334 2437 . - 0 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 1702 1763 . - . ID=g9979.t1.exon3;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 1702 1763 . - 1 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 1342 1430 . - . ID=g9979.t1.exon4;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 1342 1430 . - 2 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 991 1163 . - . ID=g9979.t1.exon5;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 991 1163 . - 0 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 690 739 . - . ID=g9979.t1.exon6;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 690 739 . - 1 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . exon 24 202 . - . ID=g9979.t1.exon7;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . CDS 126 202 . - 2 ID=cds.g9979.t1;Parent=g9979.t1 NODE_3474_length_3389_cov_38.6545 . three_prime_UTR 24 125 . - . ID=g9979.t1.utr3p1;Parent=g9979.t1 #PROT g9979.t1 g9979 MSRDTAETLLNNATVGSYIVRESERLAGDYALSMKLPASVKHFRIFYTDDEHYVNADNRYATIENLVCLGLGHYLVTEAPLYEAPNDCLRAAAEVQQQQTTDASSHSSPGLSSPAADPNAPPAILRDHVFKSHTFAKPTWCDWCKEFMWGLVTQGVQCKECGYNSHKMCADLTGGCSGKASKKN* # ORIGINAL: g12638.t1 original gene structure, not modified by PASA NODE_2940_length_4681_cov_40.1077 AUGUSTUS gene 203 2593 . - . ID=g12638;Name=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS mRNA 203 2593 . - . ID=g12638.t1;Parent=g12638;Name=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS exon 2591 2593 . - . ID=g12638.t1.exon1;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS CDS 2591 2593 . - 0 ID=cds.g12638.t1;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS exon 1083 1946 . - . ID=g12638.t1.exon2;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS CDS 1083 1946 . - 0 ID=cds.g12638.t1;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS exon 749 856 . - . ID=g12638.t1.exon3;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS CDS 749 856 . - 0 ID=cds.g12638.t1;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS exon 203 451 . - . ID=g12638.t1.exon4;Parent=g12638.t1 NODE_2940_length_4681_cov_40.1077 AUGUSTUS CDS 203 451 . - 0 ID=cds.g12638.t1;Parent=g12638.t1 #PROT g12638.t1 g12638 MRPATATVSQRRIPNGRPLLQQDGGSRGSWSDFGTEDDLSENEQADDEVLFSVTAALDSAGHSLRPQHANNNRAGASSFASLPSQPRRLSNPPPLLRPPAVSSGAQHGTAAAHQQRVGVRTLSQKTQSVRSGAYSGGWNSQGSSASSSANRLAIAHVETDYDAFVGRDISTMVHQDVTHALRPHDDDDSNPDELEMTVLDNVPLLKDGEGRPLSSVEGHLPLGSGSRTLSRTGSLSASADVEMHAHGHGHGGVAPGKEKLWQIVSQVLPTLIIAGLGLLSAGALLDRVQHFTVFQNVSELFILVPPLLGLKGNLEMTLASRLSTASNMGQLDDPKTRWLFLTSNLALVQVQAIVVGFIAALDAIVLGSFHHDHGDRTNVQLLNDALLLMCSSTLTASLSSAVLGTLMS # PASA_UPDATE: g1455.t1, single gene model update, valid-1, status:[pasa:asmbl_2205,status:12], valid-1 NODE_1634_length_10093_cov_41.3391 . gene 317 1504 . + . ID=g1455;Name=g1455.t1 NODE_1634_length_10093_cov_41.3391 . mRNA 317 1504 . + . ID=g1455.t1;Parent=g1455;Name=g1455.t1 NODE_1634_length_10093_cov_41.3391 . five_prime_UTR 317 318 . + . ID=g1455.t1.utr5p1;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . exon 317 400 . + . ID=g1455.t1.exon1;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . CDS 319 400 . + 0 ID=cds.g1455.t1;Parent=g1455.t1;5_prime_partial=true NODE_1634_length_10093_cov_41.3391 . exon 637 871 . + . ID=g1455.t1.exon2;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . CDS 637 871 . + 2 ID=cds.g1455.t1;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . exon 1140 1198 . + . ID=g1455.t1.exon3;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . CDS 1140 1198 . + 1 ID=cds.g1455.t1;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . exon 1366 1504 . + . ID=g1455.t1.exon4;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . CDS 1366 1421 . + 2 ID=cds.g1455.t1;Parent=g1455.t1 NODE_1634_length_10093_cov_41.3391 . three_prime_UTR 1422 1504 . + . ID=g1455.t1.utr3p1;Parent=g1455.t1 #PROT g1455.t1 g1455 DKKIVFSDVITKINKRNKMQERVFLMTDTAMYNLEPNSYKCKRRIPLKEIGSVSLSKLPDNFFALHVPTEYDYLLVSSKKTEIVSKILEAYEAVLGKELPITFANSFDYRIDQDTVREIHFSRVDGGVSTQIYTKKKSRDAKK* # PASA_UPDATE: g1457.t1, single gene model update, valid-1, status:[pasa:asmbl_2206,status:3], valid-1 NODE_1634_length_10093_cov_41.3391 . gene 3516 9678 . - . ID=g1457;Name=g1457.t1 NODE_1634_length_10093_cov_41.3391 . mRNA 3516 9678 . - . ID=g1457.t1;Parent=g1457;Name=g1457.t1 NODE_1634_length_10093_cov_41.3391 . five_prime_UTR 9552 9678 . - . ID=g1457.t1.utr5p1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 9392 9678 . - . ID=g1457.t1.exon1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 9392 9551 . - 0 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 7426 8981 . - . ID=g1457.t1.exon2;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 7426 8981 . - 2 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 7140 7271 . - . ID=g1457.t1.exon3;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 7140 7271 . - 0 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 6801 7022 . - . ID=g1457.t1.exon4;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 6801 7022 . - 0 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 6396 6660 . - . ID=g1457.t1.exon5;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 6396 6660 . - 0 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 5803 6209 . - . ID=g1457.t1.exon6;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 5803 6209 . - 2 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 5489 5636 . - . ID=g1457.t1.exon7;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 5489 5636 . - 0 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 4259 5366 . - . ID=g1457.t1.exon8;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 4259 5366 . - 2 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 4004 4102 . - . ID=g1457.t1.exon9;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 4004 4102 . - 1 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . exon 3516 3885 . - . ID=g1457.t1.exon10;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . CDS 3627 3885 . - 1 ID=cds.g1457.t1;Parent=g1457.t1 NODE_1634_length_10093_cov_41.3391 . three_prime_UTR 3516 3626 . - . ID=g1457.t1.utr3p1;Parent=g1457.t1 #PROT g1457.t1 g1457 MASRSMWTPQEFVRQYFGPLVAVSATADVEAACRANNLSFIELLRPFVVAPNKAYYRDVNGNTRVAENVHMRLLELSKLEPPSIPDVQRLCTDTVAQAHGSAGLTPALSPPPPPPPVARTPRGAWRVEDPGTPRERTPWYDAYWDALLGSLRPADHEYFDHPVAVMAVASTANADPIAALSRAYNPQEPPPSFVLGGVDPAVPKFHVLIHDASSSIPADKVNALVQLMKTYFGTNCTLLTINSRARAEAAGPPAVPDLWEGYVVCIRDGEKEGKSDAVTTTGRSSRAGSAWGGSGATGAPGGSSPHMRAADPLSSGGSLGPLGPLGPLDPSGDGDDGDDAFVESRAYAPADEHAEKRARWLTNDDLGRIQDFTVEFCTKVLVPSLERSLHALNEQVVASKKGIRGSFFSATRKWFGGGGAGATAGTAAPAASGRHNASHATALSTSASQLPAVVTGPEALSRRMADCAFLLQDYDFANAAYHNLRRDYQNEKAWKHYAAAQEAIGLCVLMGDSSAAGRKDPEPYLDSAISTYLTKCALPICASRATFIAAEVLRARGHYREAATVFIRMTGEDSDLRSGLMLEQAAHCFLRMSPAMHRKFAFHMILAGHRYSKSSQRKHALRCYAFALEVYRGRAWSLAEDHIHFTLGRQSFHVGALTDSIAQFAMLLRESPQPPPQQAGYLKEFLYIVKQYLARPEMQSSESVELPILPLPGIARRSLRVLLDGGGAESHSPSADNAWAEMERSLAERTTPQGSYRPAVHVMSDTTNNSERPVCVLGEPVVIEVELVNPLQIPLTMQNLCLRCEFYALDPDAVDSAAVTTTDGGPPKAGDGKAATAASPPTSAGDGHGEAEEDVDDEDVMASAHSGTGPMMLESDPGLVVTAPRGPSAMPPTGQRYIVQVVERLQMEPEERKKVRLSVTPNEEGYLYVQGIEYVLAGSVRGRRDFAVRGPRIKKAKPKGPRYGPDRRLQLVVTSAMPLLRASLEGVPETMYLGEVRRVRLSITNGGRCAMAGVRMRASDATFLCKAVPDGGLVGQHSLFLEATAKAGDAAANGGITVLAEAEMLPPGATIVVDAWVRGDALGRRDIGCVFLYESERPSQRLRYRTACVGVHTTVQPSLLVTGFVRPSAASAEGQICAVEVENMQASAEFRITQVSAVAPVWKLRPLGHVQTARHTLGPREMLSLYYGMEYVTADSAGALICSNLSMAGDAAEPLFDCSRPPHRDMLLGDQADDAGVVDAVGGRRGKLELGSRGVAVVVFWEVPGRACSGQMHVRITDMQASPAAGESPVLPVPRPLDGQGPLRTHARIVASDGSLRVLLQHPDVVKHAFVTGRMCRIPVELAVHNAGVRATNLVVEFLQPKSDKSGGTPAQPPPPSSSSSSSQFLWVGRTSLHAALAAGETFRVALSAAVTGPGVYDMARLRVFASTAELAAANAAAAVVPSHPSLLRVL* # ORIGINAL: g1456.t1 original gene structure, not modified by PASA NODE_1634_length_10093_cov_41.3391 AUGUSTUS gene 1579 3248 . - . ID=g1456;Name=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS mRNA 1579 3248 . - . ID=g1456.t1;Parent=g1456;Name=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 3213 3248 . - . ID=g1456.t1.exon1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 3213 3248 . - 0 ID=cds.g1456.t1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 2977 3062 . - . ID=g1456.t1.exon2;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 2977 3062 . - 0 ID=cds.g1456.t1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 2648 2729 . - . ID=g1456.t1.exon3;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 2648 2729 . - 1 ID=cds.g1456.t1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 2315 2386 . - . ID=g1456.t1.exon4;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 2315 2386 . - 0 ID=cds.g1456.t1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 1847 2063 . - . ID=g1456.t1.exon5;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 1847 2063 . - 0 ID=cds.g1456.t1;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS exon 1579 1685 . - . ID=g1456.t1.exon6;Parent=g1456.t1 NODE_1634_length_10093_cov_41.3391 AUGUSTUS CDS 1579 1685 . - 2 ID=cds.g1456.t1;Parent=g1456.t1 #PROT g1456.t1 g1456 MALREIKLCLLGDAGVGKSSLVLRFVSDSFNEHSESTIGQVASFMSKTIIVGEQTFKYQIWDTAGQEKYRGLAPMYYRGAAAAIVVYDITREASFRALKDWVKELKQLGPPNIVFAIAGNKSDLEAQRQVQTETAQEYAESIDAIFSETSALTAHNVQLLFESISKRLPQEAFAPKPSTSIQVTAADGNKASKGKGGCC* # ORIGINAL: g4563.t1 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 3584 5875 . + . ID=g4563;Name=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 3584 5875 . + . ID=g4563.t1;Parent=g4563;Name=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 3584 3673 . + . ID=g4563.t1.exon1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 3584 3673 . + 0 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 3793 3918 . + . ID=g4563.t1.exon2;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 3793 3918 . + 0 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 4036 4215 . + . ID=g4563.t1.exon3;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 4036 4215 . + 0 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 4368 4491 . + . ID=g4563.t1.exon4;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 4368 4491 . + 0 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 4673 5186 . + . ID=g4563.t1.exon5;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 4673 5186 . + 2 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 5288 5537 . + . ID=g4563.t1.exon6;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 5288 5537 . + 1 ID=cds.g4563.t1;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 5621 5875 . + . ID=g4563.t1.exon7;Parent=g4563.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 5621 5875 . + 0 ID=cds.g4563.t1;Parent=g4563.t1 #PROT g4563.t1 g4563 MRGLLWNTRPYSAQHWQVELGLQITAPNKMGHGSGLALWYTREPVREGPVAGAAARFAGLAVVLNTTSDKENGPVRIQIILSSGESVYDPRDPSAGAAGIALIAECVKDMAVFAGSKGHARLVLTYHDHRLQLAVSSSADAPMTTEPCLVKEEVDLPPVGYFGLSASTAPQRVGVIPPAYLPARERVDSWKQSSHTQPPRDVLGDADEFGDRNKAGSSDLEQSVPAAEQVGAADSAVPSQPMQGTLLNGGAGVRDALADAVRRIEDRLSSIASGVRMGGRNTRAVAMGVAPAAGSAGDSAGQTGGSDADDLQRMDDRVVQETPDDDTAHPESMDPMYARMLRSLGGDVARLSHASIERLDAIHALVAQLHEESDRALDAVSSRLTDVADAVQRAPTTEAKQASPADATVAIAMKNIQQQMEKLNSKLDTMAPVVRSASELRGHIVAMREEIRRDMAELQGALQAQRSAGSRQAAHELASWAGSLAMVAVCAMAAVGSYALYKRKAESAKKFL* # ORIGINAL: g4568.t1 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 17691 18594 . - . ID=g4568;Name=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 17691 18594 . - . ID=g4568.t1;Parent=g4568;Name=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 18420 18594 . - . ID=g4568.t1.exon1;Parent=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 18420 18594 . - 0 ID=cds.g4568.t1;Parent=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 18165 18311 . - . ID=g4568.t1.exon2;Parent=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 18165 18311 . - 2 ID=cds.g4568.t1;Parent=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 17691 17983 . - . ID=g4568.t1.exon3;Parent=g4568.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 17691 17983 . - 2 ID=cds.g4568.t1;Parent=g4568.t1 #PROT g4568.t1 g4568 MRVANELDIESAQSAAATGMARWGLASLAVGLGGSVLLNRVSPAFRNARLPFKVFAVTMMTCGGAATGGEVYIIRHERSMHAPVVATKDHHLDTYKAVLNRCRFHIIGGLWAVSLAGSLALSFSNPHLAFHQKLVHARVYSQSLTMTGLVIAAALIPLKDPSVKHNEKESWRVILEQQHLLDPEDDEDVAAAAGSPAPIAAGIH* # ORIGINAL: g4570.t1 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 22487 23146 . + . ID=g4570;Name=g4570.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 22487 23146 . + . ID=g4570.t1;Parent=g4570;Name=g4570.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 22487 23146 . + . ID=g4570.t1.exon1;Parent=g4570.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 22487 23146 . + 0 ID=cds.g4570.t1;Parent=g4570.t1 #PROT g4570.t1 g4570 MALHSREPLREPFGVFKLLLIGDSGTGKSSLLLRFADDKFDPDLGATIGVDFKAKNFDIGRSEGPVRLTIWDTAGQERFRTLTSSYYRGAHGVILVYDVTRRETFDSITMWLKELDTYATNGSVVKMLVGNKVDRASDRVVERAEGLAFARDHAMLFIECSAKTKVGVEQAFEELATKIADTPSLWAGAGSDGTLRVGSASSHIEAGGEGSACGGYCIV* # ORIGINAL: g4562.t1 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 566 1339 . + . ID=g4562;Name=g4562.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 566 1339 . + . ID=g4562.t1;Parent=g4562;Name=g4562.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 566 1339 . + . ID=g4562.t1.exon1;Parent=g4562.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 566 1339 . + 0 ID=cds.g4562.t1;Parent=g4562.t1 #PROT g4562.t1 g4562 MSLNELEKHVRQTSPEPSIELAAARKLDLSEDPVSAERNENDIACGNAFPDYRCEESLDDASLFSSTSPRRSMAGDNDSCGWSESDYDDVCDEREETARLDALRQIILRSEAPALNARQSEHNQNPSGPRISRLGVPRATILARVDGSTKASLVRCNVSSALRVTRIAGPADDLAAALSHSGSQENDAALGNASPVSHSEDKTQAPFGKSVAQRREGVRLRESPSSMEQLSKRMKVRVVSDGELARPKARTALSFVF* # PASA_UPDATE: g4564.t1, single gene model update, valid-1, status:[pasa:asmbl_7064,status:12],[pasa:asmbl_7067,status:12], valid-1 # PASA_UPDATE: g4564.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7068,status:12], valid-1 NODE_417_length_24204_cov_41.822 . gene 5965 7415 . - . ID=g4564;Name=g4564.t1 NODE_417_length_24204_cov_41.822 . mRNA 5965 7415 . - . ID=g4564.t1;Parent=g4564;Name=g4564.t1 NODE_417_length_24204_cov_41.822 . five_prime_UTR 7281 7415 . - . ID=g4564.t1.utr5p1;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . exon 7281 7415 . - . ID=g4564.t1.exon1;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . exon 7077 7156 . - . ID=g4564.t1.exon2;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . CDS 7077 7156 . - 0 ID=cds.g4564.t1;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . exon 5965 6643 . - . ID=g4564.t1.exon3;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . CDS 6154 6643 . - 1 ID=cds.g4564.t1;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . three_prime_UTR 5965 6153 . - . ID=g4564.t1.utr3p1;Parent=g4564.t1 NODE_417_length_24204_cov_41.822 . mRNA 5965 7415 . - . ID=g4564.t1.1.5b6be70c;Parent=g4564;Name=g4564.t1 NODE_417_length_24204_cov_41.822 . five_prime_UTR 7281 7415 . - . ID=g4564.t1.1.5b6be70c.utr5p1;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . five_prime_UTR 7077 7156 . - . ID=g4564.t1.1.5b6be70c.utr5p2;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . five_prime_UTR 6745 6916 . - . ID=g4564.t1.1.5b6be70c.utr5p3;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . exon 7281 7415 . - . ID=g4564.t1.1.5b6be70c.exon1;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . exon 7077 7156 . - . ID=g4564.t1.1.5b6be70c.exon2;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . exon 5965 6916 . - . ID=g4564.t1.1.5b6be70c.exon3;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . CDS 6154 6744 . - 0 ID=cds.g4564.t1.1.5b6be70c;Parent=g4564.t1.1.5b6be70c NODE_417_length_24204_cov_41.822 . three_prime_UTR 5965 6153 . - . ID=g4564.t1.1.5b6be70c.utr3p1;Parent=g4564.t1.1.5b6be70c #PROT g4564.t1 g4564 MSGRKAIGDAPKALHLKSTSSVPLNERFSSIRGRPTSQQGKQQRAVVAQAVRRVSRQEIVNARRETPSARSDVRGGRALATVVVTARGGRGRAVVAATKGARAAVAAATARGGARGARGARGARGGRGGRGGRGGAARGQPSSKEDLDKEMDEYMMKDPSYAKSRLDADLDSYMLDADKEDGGATEAQQ* #PROT g4564.t1.1.5b6be70c g4564 MVVHSETRVDHTRKLLLALRLTHTLHKRSVSCPRFSSIRGRPTSQQGKQQRAVVAQAVRRVSRQEIVNARRETPSARSDVRGGRALATVVVTARGGRGRAVVAATKGARAAVAAATARGGARGARGARGARGGRGGRGGRGGAARGQPSSKEDLDKEMDEYMMKDPSYAKSRLDADLDSYMLDADKEDGGATEAQQ* # ORIGINAL: g4567.t1 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 14436 17433 . + . ID=g4567;Name=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 14436 17433 . + . ID=g4567.t1;Parent=g4567;Name=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 14436 14465 . + . ID=g4567.t1.exon1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 14436 14465 . + 0 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 14553 14648 . + . ID=g4567.t1.exon2;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 14553 14648 . + 0 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 14754 14840 . + . ID=g4567.t1.exon3;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 14754 14840 . + 0 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 14968 15082 . + . ID=g4567.t1.exon4;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 14968 15082 . + 0 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 15172 15264 . + . ID=g4567.t1.exon5;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 15172 15264 . + 2 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 15412 15652 . + . ID=g4567.t1.exon6;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 15412 15652 . + 2 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 15797 15855 . + . ID=g4567.t1.exon7;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 15797 15855 . + 1 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 16013 16086 . + . ID=g4567.t1.exon8;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 16013 16086 . + 2 ID=cds.g4567.t1;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 16216 17433 . + . ID=g4567.t1.exon9;Parent=g4567.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 16216 17433 . + 0 ID=cds.g4567.t1;Parent=g4567.t1 #PROT g4567.t1 g4567 MVVGTMTPCKVALLRLVCGYAEGEFPPPVLQHLAVQIVSLLEKAEETPFSELCASLMDVGNGVVVQTLQDELGCIETVDYVFQLVNRAQSHVEDGVAGGAPRISVNSLFGLYIRACVVQFTEMHFQQVARLFELLAEYQNGSTHTNVVGSCETPTNRAVHSAVANGELLTAMDALHTRPTRADGSLWSAAQTSRAPPNAQSRKARASFHYESLALAGVHFRFGHTEEGLKALDETVRIAQESGDSTCIQYALAWIAHLDENGLTQDALSAAARLAARSLEFDLPSLHSLALLVQAERETGALVDGSRHDAHDQHAPKNSHVHSAVAGFVEKAGDAAFRNAIRDVRPSAHVISTAAWGSWGCAGLEAVYPELVNIFHSTCAKSEDIVFVKAATAFSAALFPDKSREADVTLPECDGQFDVPVTPEWSAWVDVSHAIVAAKFAADGDVDAALCAASGIRCALERAAITAEAAINSGDCALARSLLAAVDPRNGGGRTTAASLRVLVLLAASSIHGGQPELAVAPLLGLASAAQARGWSRICTEAILYLGEAQLALGWSDICRETVESALPSILANGGLLLAARAKQLYGRALVSCAQGEGCATAGGRALLHASTDVLSDAARLFGRAECERRAADCLRHLAEAHNALGNESVRNIVAAARQDLHLDTVSATL* # PASA_UPDATE: g4566.t1, single gene model update, valid-1, status:[pasa:asmbl_7069,status:3], valid-1 NODE_417_length_24204_cov_41.822 . gene 9757 13892 . - . ID=g4566;Name=g4566.t1 NODE_417_length_24204_cov_41.822 . mRNA 9757 13892 . - . ID=g4566.t1;Parent=g4566;Name=g4566.t1 NODE_417_length_24204_cov_41.822 . five_prime_UTR 13744 13892 . - . ID=g4566.t1.utr5p1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 13641 13892 . - . ID=g4566.t1.exon1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 13641 13743 . - 0 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 13374 13506 . - . ID=g4566.t1.exon2;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 13374 13506 . - 2 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 13098 13228 . - . ID=g4566.t1.exon3;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 13098 13228 . - 1 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 12083 12963 . - . ID=g4566.t1.exon4;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 12083 12963 . - 2 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 11752 11923 . - . ID=g4566.t1.exon5;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 11752 11923 . - 0 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 11503 11638 . - . ID=g4566.t1.exon6;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 11503 11638 . - 2 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 11205 11303 . - . ID=g4566.t1.exon7;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 11205 11303 . - 1 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 10326 11047 . - . ID=g4566.t1.exon8;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 10326 11047 . - 1 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . exon 9757 10236 . - . ID=g4566.t1.exon9;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . CDS 10073 10236 . - 2 ID=cds.g4566.t1;Parent=g4566.t1 NODE_417_length_24204_cov_41.822 . three_prime_UTR 9757 10072 . - . ID=g4566.t1.utr3p1;Parent=g4566.t1 #PROT g4566.t1 g4566 MAGNGCAGALILASVLAIGLLCVNVCDGAAHGRTRRLDDSIAHFEPLTLDVAHISEAHTRHRRSGGVQPMTVDFQAFDRKFTLHLVSNRIHFEDAEFEAVYADGIPRRIDLDKTHFLRGIVQGDRASEVIVSVFDGRLEGIVNAHGESFRIESSHRYFREAHDFNAVMYRASDVDVSPLARAGCLGGAQPPPVVGEEHVRSLNMDETVYSMFNPGYLPSAARTRRAFNPAKSTCLVYLIAEHSFTADTVAQMANGGVGFSDLQKQAEVIRRITSYLAAADSIYRQANFAGDSGYGLGVGKVTVYFNNTGTVYTETPVSDDYLRYFAQSSNFDAYCLAHIFSYREFNDGVLGLAYLSFTDRTGGICAKFSPVRLSTGDAMMSLNTGLVTTLNFGRRVSTVVTEITFAHEAGHNHGSKHDNDASVNCVNPSPDNGNFIMFAQATDGSKTNNRLFSECSRSSMAANINAKAATCFKPTTAACGDLIVTASEACDCGGDAALCASVDPCCTANCTLSSGSDCSPLKTVCCDSTCKFRSSSVVCKAESDCAAAVTCNAANKNGCGPINATVDTSFNSFGCNCREANNKDCPLVCDAGQCKKSFCATLTPPTSACQCLSPENRQCTLCCMINGTCTSTFDMPSPKNITLTSTYGCLNNLGWCDSRNAATGAIPQCKLINNPDTTNLFSSDTLNAVLSWLKKNWYYVLAGVGGAVVLVILLKVTYRKKDVGDQGSFGQRVRNSFRRNPGPSKAAPVAAIVVAGGAASYTATNPDKYKESMSMEPVQYVTGPSDVDARRDACRELKRMYPTVDDTIIVSTLKSFQFDVRRAAMQLNEMGYKPAQAGAAPRTDYY* # PASA_UPDATE: g4571.t1, single gene model update, valid-1, status:[pasa:asmbl_7071,status:12], valid-1 NODE_417_length_24204_cov_41.822 . gene 23235 24022 . - . ID=g4571;Name=g4571.t1 NODE_417_length_24204_cov_41.822 . mRNA 23235 24022 . - . ID=g4571.t1;Parent=g4571;Name=g4571.t1 NODE_417_length_24204_cov_41.822 . exon 23924 24022 . - . ID=g4571.t1.exon1;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . CDS 23924 24022 . - 0 ID=cds.g4571.t1;Parent=g4571.t1;5_prime_partial=true NODE_417_length_24204_cov_41.822 . exon 23647 23799 . - . ID=g4571.t1.exon2;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . CDS 23647 23799 . - 0 ID=cds.g4571.t1;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . exon 23490 23540 . - . ID=g4571.t1.exon3;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . CDS 23490 23540 . - 0 ID=cds.g4571.t1;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . exon 23235 23384 . - . ID=g4571.t1.exon4;Parent=g4571.t1 NODE_417_length_24204_cov_41.822 . CDS 23235 23384 . - 0 ID=cds.g4571.t1;Parent=g4571.t1 #PROT g4571.t1 g4571 VVITDYPEASLIDNIQRNVDVNLDGHRNRVVVQGYLWGAGVADLLAANNGEKFDLVLLCDLVFNHSQHTKLLQSAHACLADGGKVIVAFTHHRPWLADKDMAFLTLAEQEPFCFLVRRMFEDRMDPMFPNDPGDRDVRATVHGFEMTLRQ* # PASA_UPDATE: g4569.t1, single gene model update, valid-1, status:[pasa:asmbl_7070,status:12], valid-1 NODE_417_length_24204_cov_41.822 . gene 19130 21689 . - . ID=g4569;Name=g4569.t1 NODE_417_length_24204_cov_41.822 . mRNA 19130 21689 . - . ID=g4569.t1;Parent=g4569;Name=g4569.t1 NODE_417_length_24204_cov_41.822 . five_prime_UTR 21683 21689 . - . ID=g4569.t1.utr5p1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 21261 21689 . - . ID=g4569.t1.exon1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 21261 21682 . - 0 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 21043 21165 . - . ID=g4569.t1.exon2;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 21043 21165 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 20759 20955 . - . ID=g4569.t1.exon3;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 20759 20955 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 20475 20655 . - . ID=g4569.t1.exon4;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 20475 20655 . - 2 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 20125 20334 . - . ID=g4569.t1.exon5;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 20125 20334 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 19963 20011 . - . ID=g4569.t1.exon6;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 19963 20011 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 19737 19879 . - . ID=g4569.t1.exon7;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 19737 19879 . - 0 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 19495 19605 . - . ID=g4569.t1.exon8;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 19495 19605 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . exon 19130 19407 . - . ID=g4569.t1.exon9;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . CDS 19257 19407 . - 1 ID=cds.g4569.t1;Parent=g4569.t1 NODE_417_length_24204_cov_41.822 . three_prime_UTR 19130 19256 . - . ID=g4569.t1.utr3p1;Parent=g4569.t1 #PROT g4569.t1 g4569 MGCCGSKEKNRGSVYKSEGAQLPLKPPPSSQQLAPAQPQHATPMPATITKPPAVAQQNAGNASTVRKAAQPVAPVPTNVFEATWDYEARTPQDLSFKKGERLKIVNNSDGDWWQAESLLSGKIGYIPSNYVAPVHSLLTFDWYHGAIKRQDAERLLSELGQQGSFLLRDSETRPGDFSLSVKDGVGIKHYRIRILDDQSGYFISRKSTFENLSDLVAHYSVDADGLCVALVRPCPHFSKPNAPDLAYNLKDEWEIPREQLTLIRKLGGGQFGEVWEGLWLGKTSVAIKTLKEGTMTAQDFLKEAAIMKRLKCDKLVQLYAVCTDRDPIYIVTELMRHGSLLDYLRERGTTLKQPQLIDMAAQVAQGMAYLEAQNYIHRDLAARNILVGENNNCKVADFGLARIITDDEYTPQEGTKFPIKWTAPEAALYNKFTIKSDVWSFGILLTEIVTFGRIPYAGMTNAEVLQAIERGYRMPIMQGCPDTLYAVMMDCWKADPEDRPTFDSLQYRLEDLVVNSGGEYHEASRMLK* # ORIGINAL: g4565.t1 original gene structure, not modified by PASA # ORIGINAL: g4565.t2 original gene structure, not modified by PASA NODE_417_length_24204_cov_41.822 AUGUSTUS gene 7714 9759 . + . ID=g4565;Name=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 7714 9009 . + . ID=g4565.t1;Parent=g4565;Name=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 7714 7815 . + . ID=g4565.t1.exon1;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 7714 7815 . + 0 ID=cds.g4565.t1;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8013 8197 . + . ID=g4565.t1.exon2;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8013 8197 . + 0 ID=cds.g4565.t1;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8298 8413 . + . ID=g4565.t1.exon3;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8298 8413 . + 1 ID=cds.g4565.t1;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8516 9009 . + . ID=g4565.t1.exon4;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8516 9009 . + 2 ID=cds.g4565.t1;Parent=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS mRNA 7714 9759 . + . ID=g4565.t2;Parent=g4565;Name=g4565.t1 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 7714 7815 . + . ID=g4565.t2.exon1;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 7714 7815 . + 0 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8013 8197 . + . ID=g4565.t2.exon2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8013 8197 . + 0 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8298 8413 . + . ID=g4565.t2.exon3;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8298 8413 . + 1 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 8516 8920 . + . ID=g4565.t2.exon4;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 8516 8920 . + 2 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 9045 9144 . + . ID=g4565.t2.exon5;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 9045 9144 . + 2 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 9371 9476 . + . ID=g4565.t2.exon6;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 9371 9476 . + 1 ID=cds.g4565.t2;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS exon 9586 9759 . + . ID=g4565.t2.exon7;Parent=g4565.t2 NODE_417_length_24204_cov_41.822 AUGUSTUS CDS 9586 9759 . + 0 ID=cds.g4565.t2;Parent=g4565.t2 #PROT g4565.t1 g4565 MSNNGELDLGFLDPFEDAVRATSPYFPSKAGGLPAWLDFEGLPPIERLTCETCAEPLSFLLQLYAPQDDIEHAYHRTLLVFCCKKGGCHKAAGRRSFRVFRCQLARVNKYYSPDEPAKDDPSLKQWREHRGGEFARLCCVCASPAPKTCASCKKAHYCSRAHQTLHWRCGHKELCAAALGSAAQRVPFVACIDAASEAARSALFREFEISTEPGDNFEDEDAGAADNANGSASDSDGSDGEGDDQGESARLEEYRKTVEKLQLEQDEGEGVAHCDCFLTHHRWFARVVAFCFADKVPW* #PROT g4565.t2 g4565 MSNNGELDLGFLDPFEDAVRATSPYFPSKAGGLPAWLDFEGLPPIERLTCETCAEPLSFLLQLYAPQDDIEHAYHRTLLVFCCKKGGCHKAAGRRSFRVFRCQLARVNKYYSPDEPAKDDPSLKQWREHRGGEFARLCCVCASPAPKTCASCKKAHYCSRAHQTLHWRCGHKELCAAALGSAAQRVPFVACIDAASEAARSALFREFEISTEPGDNFEDEDAGAADNANGSASDSDGSDGEGDDQGESARLEEYRKTVEKLQLEQDEGEDEDLDDLFKKFDKSDKQFAHFEKTIKRAPEQVIRYHRRAPPLWIGTKDIPTADAIPQCACGASRTFEFQVLPQLLYYLRVDDDVSLDKLAGGIDWGVLAIFTCDANCNIAGDTKYAEEFLWRQAVV* # ORIGINAL: g13756.t1 original gene structure, not modified by PASA NODE_234_length_30084_cov_68.3275 AUGUSTUS gene 5004 6119 . + . ID=g13756;Name=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS mRNA 5004 6119 . + . ID=g13756.t1;Parent=g13756;Name=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 5004 5645 . + . ID=g13756.t1.exon1;Parent=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 5004 5645 . + 0 ID=cds.g13756.t1;Parent=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 5720 5879 . + . ID=g13756.t1.exon2;Parent=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 5720 5879 . + 0 ID=cds.g13756.t1;Parent=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 6001 6119 . + . ID=g13756.t1.exon3;Parent=g13756.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 6001 6119 . + 2 ID=cds.g13756.t1;Parent=g13756.t1 #PROT g13756.t1 g13756 MDRPSRDSGDLPAMGGFFSLFVGLGGSLPLPDRFGSARGSEGDADRVGRGSCSWRRGLDAGREDRFSYAEGSPNDMHGRAEQMIELMHAFSGLDLARNSDFDILFSTRISPEFEPARCGVDGMAAESPGIRERLLLHRPGSDVGHEGLRLANNCQPGGAGRGNSLRDRLFLDNRHGNAAAPTTDALDSGVVGTVLGAECGPSQCFAGRDTVLNGSTRQTTSNVYHSDGSTETHVVRCVGSECTRTTMRRTADGVIVAGDCVDGHGLDGTAPTTPAPILTEPHADALRNDLASAMSRVFDLLGGRLR* # PASA_UPDATE: g13757.t1, single gene model update, valid-1, status:[pasa:asmbl_4103,status:12], valid-1 NODE_234_length_30084_cov_68.3275 . gene 6320 9329 . - . ID=g13757;Name=g13757.t1 NODE_234_length_30084_cov_68.3275 . mRNA 6320 9329 . - . ID=g13757.t1;Parent=g13757;Name=g13757.t1 NODE_234_length_30084_cov_68.3275 . five_prime_UTR 9232 9329 . - . ID=g13757.t1.utr5p1;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . exon 8772 9329 . - . ID=g13757.t1.exon1;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . CDS 8772 9231 . - 0 ID=cds.g13757.t1;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . exon 8210 8666 . - . ID=g13757.t1.exon2;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . CDS 8210 8666 . - 2 ID=cds.g13757.t1;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . exon 6683 8066 . - . ID=g13757.t1.exon3;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . CDS 6683 8066 . - 1 ID=cds.g13757.t1;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . exon 6320 6556 . - . ID=g13757.t1.exon4;Parent=g13757.t1 NODE_234_length_30084_cov_68.3275 . CDS 6320 6556 . - 0 ID=cds.g13757.t1;Parent=g13757.t1 #PROT g13757.t1 g13757 MKAGAVSMVGFAGRAMGLWLLTGMLLRIALGNSVPINGDTCATTSQACLAGVERALLQEENDHFCGFGGAPPCLWTVPSNGAHGCILHKCAYSMLDGSSCGKEQNLDITCTLSCSVLGLSSSVGFGECAPEQWTSSLHFSAMVSRRLFGDGGVAKRDSGEEVNILPEDDDLSGVSVSIYDAPVSDDVSTQVSEHSSRNPTPNETADPQATPELPELAPPTSATAHATNSMKEEVDGDGDNDGDDDSDGTDGDGLLVAAPKSALVLLVIDDPYQTVDSDDIEDAIEVMLDLEVNAMELTDYVVPDNMTAFAFVALESTGQVKDADDIVSQLLDLSSDYLEATLGARVVALIGLIPDDPANEQPKSSNTNVGLPVGICLGIFMAFVIVIVALKTRHGARRRAEGDTGQEPAFKLRKVEIAGVIMDIGGDVNTDDASEKQFLDDYFLANETVVSVDSNGSHKLAERSPASEGHRMSATEEQSGVCECEGPPRANTVVPPDSGAELLYRACLEGDAEAIRSLLVRGADPCAPFAVHSGSTPLHLAVYSQSIEAVRAVVEAIKNVDGAAGADGATRAELSGISKDDAGDAQSPADSMLSESARSSAGACDIVAVGDDGYGSTGGPSPPSSNLSTAVSPSNHSPAPSETPGGHTPDCEGAREGGMRRLPSEESLRSTEESNAGESSVSEGRDARKRRSVRLDAVDGDHCTALCVAARLGLIDILGHLLTEGASPLIADANGWAPLHWCAAGGNVDAVELLCRYGARKNQRTHKEQTPLFIAAREGQAAVVALLFDAGADRTAPDMEGRTPFSAAVSAENPGAPAVFFGSAGLATQHRPIQPRDTHSQHYRW* # ORIGINAL: g13754.t1 original gene structure, not modified by PASA NODE_234_length_30084_cov_68.3275 AUGUSTUS gene 180 1507 . + . ID=g13754;Name=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS mRNA 180 1507 . + . ID=g13754.t1;Parent=g13754;Name=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 180 272 . + . ID=g13754.t1.exon1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 180 272 . + 0 ID=cds.g13754.t1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 394 461 . + . ID=g13754.t1.exon2;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 394 461 . + 0 ID=cds.g13754.t1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 554 744 . + . ID=g13754.t1.exon3;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 554 744 . + 1 ID=cds.g13754.t1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 861 968 . + . ID=g13754.t1.exon4;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 861 968 . + 2 ID=cds.g13754.t1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 1052 1169 . + . ID=g13754.t1.exon5;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 1052 1169 . + 2 ID=cds.g13754.t1;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 1288 1507 . + . ID=g13754.t1.exon6;Parent=g13754.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 1288 1507 . + 1 ID=cds.g13754.t1;Parent=g13754.t1 #PROT g13754.t1 g13754 VECTRECLAALHTLWDAQMRKSDALRVEWEKVRCVEGHLAQARDDNDARLADIRALAHYETSPGDVVGDAILINIRSALADVYRQERLADRVRDRTRRVYASAELTATLSWAQPSRCGVAHNVGVPHTLLGGWYGDILCDDGVEANNSTCKDNSSDLAFYDVGWQLKNATQGIETLRFSSRRRGVCIRVTLTGCPADGTLSVICDPHFGGCTHESAIAMLRDGGPRAFVRAMLWPAIDARMQQQAIAHRDNVDSEQRERWTECLE* # PASA_UPDATE: g13760.t1, single gene model update, valid-1, status:[pasa:asmbl_4104,status:12], valid-1 NODE_234_length_30084_cov_68.3275 . gene 28686 29943 . - . ID=g13760;Name=g13760.t1 NODE_234_length_30084_cov_68.3275 . mRNA 28686 29943 . - . ID=g13760.t1;Parent=g13760;Name=g13760.t1 NODE_234_length_30084_cov_68.3275 . exon 29489 29943 . - . ID=g13760.t1.exon1;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . CDS 29489 29943 . - 0 ID=cds.g13760.t1;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . exon 29231 29366 . - . ID=g13760.t1.exon2;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . CDS 29231 29366 . - 1 ID=cds.g13760.t1;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . exon 28686 29023 . - . ID=g13760.t1.exon3;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . CDS 28889 29023 . - 0 ID=cds.g13760.t1;Parent=g13760.t1 NODE_234_length_30084_cov_68.3275 . three_prime_UTR 28686 28888 . - . ID=g13760.t1.utr3p1;Parent=g13760.t1 #PROT g13760.t1 g13760 MLGRLLDRFINDENHTDVHDRAMLYYRLLRSAPSFARRVTSGGGRIGDGAVAKEGIAADPSVFGKILAEFNTLSPVYGKPAALFIAQKLPYASAARQAIADRGVLGAATTSGADVEDPQTGSRMDALTALLSPEAWMDPAEFEAKWLGTARSERVNVRLSSSSLVLEFEAAMAGRGLMTVASGVDGSVAKYFLYGQDRLTGALILVEAIVDAASQTLSATVKTDGADAIARQFSLALGSAV* # PASA_UPDATE: g13759.t1, single gene model update, valid-1, status:[pasa:asmbl_4105,status:12], valid-1 NODE_234_length_30084_cov_68.3275 . gene 18808 28661 . + . ID=g13759;Name=g13759.t1 NODE_234_length_30084_cov_68.3275 . mRNA 18808 28661 . + . ID=g13759.t1;Parent=g13759;Name=g13759.t1 NODE_234_length_30084_cov_68.3275 . exon 18808 22609 . + . ID=g13759.t1.exon1;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . CDS 18808 22609 . + 0 ID=cds.g13759.t1;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . exon 22728 26987 . + . ID=g13759.t1.exon2;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . CDS 22728 26987 . + 2 ID=cds.g13759.t1;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . exon 27170 27236 . + . ID=g13759.t1.exon3;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . CDS 27170 27236 . + 2 ID=cds.g13759.t1;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . exon 27401 28661 . + . ID=g13759.t1.exon4;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . CDS 27401 28115 . + 1 ID=cds.g13759.t1;Parent=g13759.t1 NODE_234_length_30084_cov_68.3275 . three_prime_UTR 28116 28661 . + . ID=g13759.t1.utr3p1;Parent=g13759.t1 #PROT g13759.t1 g13759 MTDSDGGLDDEDCIGTADVIVFEEGQRVALVKILVSDDNSPEFSETCRISIAQVSLGRIRDVDSFVTIAIPANDHPYGVFGVSAVNSVVEEGSEAAFRVFRRWGSLGAVDVQMAVVNGSTSHGVSFSMSSDTVRLEKGVNETLVFVSTLADDIPELDEPFGLELVAVAPVAPSFSRDSGLYPEISVDSRLATAVVSANDNPYGTVSFESDSAFVSASEGSRALLSLTRSGGTFGAVNAMVSTVAMTARRAVPETATPNGDYRTLANFPVRFEGGLSSATFQVDIFDDNQPELDELFFVVISRIDVAERALGDGGLEPSVGELQEATVLINTNDDPFGVFGFASLSLFQSVPRGNGSVSFSILRQGGLFGEVNVTYATFAINATEGLDFIPGRGIVTFKENQNTAEFMVTIVDYSVPVLDEWFGVRMLSASANAPSNDSPPRIGVASAALVQLQQAHAPQGYVGFEVSETVANEADGVLSIDIVRTGGALVRVVYRVATQNSSSVSGNDFVFLNETVVFEISEKRKTVGLALIDDAIPEPERRFAIELSAVSPDSLVGAIRSMSVVLSADDDSAGLFAFEESGVGVRTNETSAGTGTVLHLFVSRSRGAFSVATVSWRAAPVDGGSADFGPLSGSVVFAAGQRRGFVEITLSADGVPELDRQIQITLTDASVGARVDTSASDVVVTVNENDDPFGVFGFADRELIVDEGGEVAAHIRRTGGLFRSVDVVLRVVFGSATSSDVTFKSVTVFFGPGQSVAQAIIGAVADNIPELEEAVDIEILAATVLGSDAQAPVQPGNRSLHVIIPQNDVPSGTFSFESSEYFVDEGTALTVIVHRDRGALTASTVGLTYSFVGTDGVVFAASPSDFGSLLATLSFGIGETNKSFVIESVDDSIPERPERMTIDIKSVSHGSVGANRTANVLISGNDDFGGVIAYATDSLFTSVVEDDGANGSTTVSLVILRTGGLSGTVSVAWEVQPTTALGVLTRFAGAIKFADGQSQATMSIVTVANQVPQLDTVLVVSLVSVTGEGARLLPGRTAATVVLLDNDDTNGVFLFDAASASVSVPEDSAAGVGSIVRVKVVRERGTFGAVTLSWSSTSDPATGYSPSRGNVSFSEGQTEGYIEIQMTADDVPELAQEVVLTLESVSGGARLSTTGALASSVVIEDNDDAHGLLSIDSGSVKILVPEDSAAGVGSIVRVKVVRERGTFGAVTLSWSSTSDPATGYSPSRGNVSFSEGQTEGYIEIQVTADDVPELAQEVVLTLESVSGDDVPELAQEVVLTLESVSGGARLSATGALKSTVTIDASDVPLGVVTVKAASVSVSEGDGTVTVVLQRSASALGGLSMRVRTVDGTATEGADYTGLDTVVTMLVGQETATVTVPVIEDDVAELGETFLVEIVDVLNALGMVGEPHVTQVTILASDNPLGTFEFDSESLVVPATEPEPGQTGDDSLGFSFRVVRTGGTLGAASFDWVLDGAAASGVTPASGTVSVQAGQVSADILVTVIADDTPELDAVLLMRLVRVSEGGASIGTRAVAQMRLAGSDDPHGLFGFADDSRSISTEDGAGGVEVTIVRARGALGRVEVTLRTEARGTDAADAGSDYDAASSVVFEEGETSRSIVVTILANVDVPEKAESFALVVSNVRVNESVIGSLQPRVNASSDVAVFTIAAHDDPNGLFVVALASPETVSEDIRQVSVVVRRTRGLFGSVTVALATVGGARDGGSDGLATTGADFLSPNSTVLQFDEGVMFLFVAIPIVDDDVPEKDEVFSVAISSATGGARIGGSSSLNFTIRENDDAHGVVQFEARQSALPVRDDGSSEDAVVALTVLRDRGVFGRVAVPWTVDVKGFERGADPAADLSPSSGTVVFEDGQATATLRIAITRDGLPELAESFAVVLSSDGDGGSKLGATIRAVVVIEESDNIRGLFAFETSQFVVKEALGVVFSAAVVRTAGAVGPVTLNVTLGAVPGVPQLTVLKDYRIRRGLSVGSITERSFVVRFADNVTRVLIDFTIVDDTEPELDEAVVLKLEAISVAESVARPPSLAVVSENSTCRVAVLLNDEPFGRFSFKSPSQLVKEGSVANFTVVRTGGLAGKVLLKVMSLNRTALDGIDYEGVSALQTFSAGKTTADDAQIVSVFAIPDNEIELEESMSLRLEVASVLLVQDGAEQEAMPQSTKGWTGASVGADATVVILSPPVSDVFCPKEVVAGVTWLPVLPGTISVLPCAHGFVGTQLRPCGPRASVWGNVDSANCVSLQDLLKDILSAPVNAANIGEKTAALSGITGQASSLDASSAGEVVGLMGSMVSVLIDAGITAESAGPILSNLGSMLDADPTAISGSAASLASIVDALATGLVNTLAPGEAVSLESGNLKIHGVGVDPENPAVVDLGSLLGGGDSSGGNSTNSGESGSGIGRRRRAAGASGGVSFTIPPTAVTQAAALLDEGGALGVHFAVYENALLFPANASADQVVGTKVVAAGFAGIITDSVEFTAGTFVEFTLDSINDPITTTAPEPGVTLFRASTLCAYWDFPTSSWSTRGCAPTLVTANSTTCRCNHTTSFSVLFKTGKSTTSSANDKALSVISYVGCALSMFGAAATIITFMVLRNLRSFAIKMLIHLMVAIFATNLVFIVGVDRTDNADACAAAAVFLHFFLLSQFTWMLMICTNLFRGIVRLATDTEEYFKYMVAFGWGVPTLIVVLSMAIKFDMYGDADRCWIVDTNALIGSFFVPLGIIIIANIIMFAMIVHALVVQARERKMLKQKDDRSQFKIIFGVFALLGITWIFGLLSIGTGNIVMQYLFVITNCFQGAYIFVLYCFSRRVAEGYAQAFAGRFGLLSSFFSSLASTRSTTGGASSSGSGAPSTSARSASYAASGTYDSSTMSGNDFGDDSGTYRRTTTASQPPTMSRATAPSQPATLSRAAAPTLIGIADPEQFRTKAKKMALDDSEESRV* # ORIGINAL: g13758.t1 original gene structure, not modified by PASA NODE_234_length_30084_cov_68.3275 AUGUSTUS gene 10422 18719 . + . ID=g13758;Name=g13758.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS mRNA 10422 18719 . + . ID=g13758.t1;Parent=g13758;Name=g13758.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 10422 11034 . + . ID=g13758.t1.exon1;Parent=g13758.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 10422 11034 . + 0 ID=cds.g13758.t1;Parent=g13758.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 11170 18719 . + . ID=g13758.t1.exon2;Parent=g13758.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 11170 18719 . + 2 ID=cds.g13758.t1;Parent=g13758.t1 #PROT g13758.t1 g13758 MNNEILGGATYESPCHSRSTDDADDLYVKVVVAFCSNSTLHLSTSMYESESSCNEGGPVLVVMNAFATVCEDPDTFRNPEAQMAKLSLAFHSLSVTPRNENGIKAILVEECGVMGETVVVDSPVSLVRGNETLECIDRRSKRYWPSNDASCMYRGLTMAVDSTTWELLVHGRDLWRFAECERYANNLATSNDVVRLQPIYAGLPESCDSPSQPRVDLACPIAVYHLTEVLGDTLVGEGTSVIIAPLRRFAGMPTGGTLRYWGSKSYGATPGLDYSPARGILTIDESSDTTSSVEIEVLSDDIHESTEVAGVHFTGSISAVPHKDANFKFTIVEDTNDDLAFTFTTKESYLESTYGKDGAVFGVTIKPSSKDINTPHTVVIYVDGTDAVAGQVVFESGDGEKVAVLTIPSIDATAGDFVLKLTDDVDIEFDRMRIHRNAKDDGEFGEISFLASEVTGFVANPVSVTIIRPDTIVGDVTVAFSVGDSNPNQVYLVTTATFDRKTGTGVAFIPPRADNITLDFYLVPHEGEDAKQSFTVTLLSTSAPTSVTKTKLLANLSPRDGSKYGFVSFESSTHFVYASSYDTEVTLYRTGGLTAVIVVNINTVGESSVIESFRDRQVRFRSGEKTATIQIHIVGDGKVNSKESISLQISSVRGGGVVGCTPTLHIEVSDETAEQGSISFAQQFVEVSPFDSGFKLHTQTEGLAAAFSFKFVYTIVVSSLGSPTSEPETFTTFTESDSLSGLAYTTLEIPMPEYVDPFSVMVVTITKANNGVAVGEFNAVTVAMTADGALFGRVSLRAATTEVPTGSASIPIRLRYEGGPETPFLLVTIGVSEGTVNVDDEPFKATTIRVTSRGAIAWLNIGRDYARIIGKVFEIINVVGGAQTGDFPATTMVEVDPKTKTIIQPTSRTVFFGLELQTDEFFNAFFTIRRSARGDLSEVSVDWREFDGPAPKQVAHPIGILVPSRQDSMPCQFAPLSLIAECKLSFSLDFFRNSGERPNGELFGGIALTTTDDDDSFVLYGESKITFVTHTFPPYGIFVMDDAGTTIYVSQGQRYATFSVSRLYGTRGRVSLTIVVEPVVATGADAAAEPGIDYLDDSFSLVFEAGETNRNKSVELLWPHTKETTRSFRIMLRAVKLAEREVDVFSSVAVPQPTQTLILPTDEPADTTHFPPLVGSGRSLDVIIRQVYKPTTYSLSMLNDDGSVAEGSHAVFLLTRKAPFYDTEMLMWSISTTESSAGDDDDVDPRAGTVSFATGDSNSVKFGVSVRDDSIPELIETLTVLALNERGDVVAVTTFDIPSSDDPEGFLEFEFGSRFIQVAQNAEFTVVVGRPAGALVNVFFNVDIVPADGIKPVFPLSLSGVLAAAGQKRISLQFLAPSNRVPWEEAEYLLLLTPALSTGAAARISADSENTTAIVKVLSKDYPNGLFAIDRPLDIFNVPQSADGAYDVSECGCELHFPVVRSRGLTGRVVLTVTVTSSGLEDGDVTNGDDVVVLPTVEFADGAETAHVIVPIVDDGLAEPPESFLLVISSPILDGEQEPLQDSISQSSVLVRIALSNNAGGTFRIVSRSPTVQEGEAVEFTVYRSLTLVPATVVVYFMGGSALVPSDFDGFGESGVSSVLAFPAGVAEVTINTQTVADLEVEIDETIVALLGSTSFGASIANFNDSGSASSIILGDEGYAGTFGYSLASQTSIFVDQSTGTVNLTILRSHHTLSPVDVHWSISEDDGDDMPDFQEGYSGVILFEEGQVSSVLTLTIINDEFPEFQETATVTLVVLARGALLNESADSVDVVIAEHGQPIALALVEPTEFPSLAPSSEATVPLKFPLPARVGTVAWNVVPASTVLSRRAISGNGGPSPADYFVETSGVVECDPRKSLQGAITVTVRDSARNLPSADFVILLSETDGKISLTSEKVAAKLTVVGSYAGIFSFFNAPERSVLQESTSDSPTPFIATVARSQFGFVNATVHWKIVPADGGSDPVPTDISPLSGTLQFLENDVSSSIILDVAADDIPELQRTFRLVLELVAGSMSGPPSIDLFIKASDNPNGIISLQSPHSIQEDGGYRANVLRDGSTLGIVRVTLVIGSESATYPDDVGGFLADGGVRTVVTLGVGATSGISDGIMIVDDKVAELDETFTVTIESVEAVLTDAAIDDGLRPSIGRVSVARVTILSNDNPWGVVSFGDGAMSVKEGEGRVKVKLVRSGGTLLASTVRLSFFNGSADEGDVSVDVLTEIVFAEGKTTAEGSFDVTDDDEPEGDETFAIGLVSVDGASDRVTESRLLVTIGQNDDFNGVFSLAEAGSTVEASEGASFVLTIERGAGVGGRCVVRWRALESDRDGASDLSEVEGLVAFEDGERVKTVEVAVLRDGIAEFAENVTLSLVSVSGGGRIDDDRDEAVVRIAANEDPYGTVSITSGESVNVGEGDGTVKVGIGRSGGSGGVLRVTLVIGSEGATYPADVGGFLADGGVRTVVTLGVGVTSGISDGVVIVDDKVAELDETFTVTIESVEAVLTDAAIDDGLRPSIGRVSVARVTILSNDNPWGVVSFGDGAMSVKEGEGRVKVKLVRSGGTLLASTVRLSFFNGSADEGDVSVDVLTEIVFAEGKTTAEGSFDVTDDDEPEGDETFAIGLVSVDGASDRMTESRLLVTIGQNDDFNGVFSLAEAGSTVEASEGASFVLTIERGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGSG* # ORIGINAL: g13755.t1 original gene structure, not modified by PASA NODE_234_length_30084_cov_68.3275 AUGUSTUS gene 2726 4347 . - . ID=g13755;Name=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS mRNA 2726 4347 . - . ID=g13755.t1;Parent=g13755;Name=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 4024 4347 . - . ID=g13755.t1.exon1;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 4024 4347 . - 0 ID=cds.g13755.t1;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 3756 3908 . - . ID=g13755.t1.exon2;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 3756 3908 . - 0 ID=cds.g13755.t1;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 2932 3658 . - . ID=g13755.t1.exon3;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 2932 3658 . - 0 ID=cds.g13755.t1;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS exon 2726 2784 . - . ID=g13755.t1.exon4;Parent=g13755.t1 NODE_234_length_30084_cov_68.3275 AUGUSTUS CDS 2726 2784 . - 2 ID=cds.g13755.t1;Parent=g13755.t1 #PROT g13755.t1 g13755 MPSHQIQSVGKPLQRLSVDEPAQLYSAAALSNASPHSDRRTVTFVDAPEELASKTTLLAALMRAAQHCVVYTGAGISTACGIPDYRGPDGVWTLASSNRAGDISAVSACDARPSLTHMALAELHRRGVVRHVVTQNCDALHLRSGLPREALSEIHGNMFVETCSTCGSEIVRTFDVTERSRVRRHDTGRRCDSRVCTLCQTADGSAPVDVDGEQSAAIIGGPEESASGDLCGVCNGAISHCGGMLEDTIVHYGEKGGARGERVLGWEAALSNAASADLIVCMGSSLSVLRHYPLWGARRSGKGCGSGRALREALLAHSVGADGRNAQGRWRREGPVLAIVSLQPTAKDAAADVKLNATCDAVMDAVLHHLGMDCKPYGGRDADPFFARAVGAVSEPNAHGTDGPASLPGWMATQVNRRRR* # PASA_UPDATE: g1125.t1, single gene model update, valid-1, status:[pasa:asmbl_2885,status:3], valid-1 NODE_1879_length_8747_cov_45.7043 . gene 3364 6871 . - . ID=g1125;Name=g1125.t1 NODE_1879_length_8747_cov_45.7043 . mRNA 3364 6871 . - . ID=g1125.t1;Parent=g1125;Name=g1125.t1 NODE_1879_length_8747_cov_45.7043 . five_prime_UTR 6836 6871 . - . ID=g1125.t1.utr5p1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . exon 6040 6871 . - . ID=g1125.t1.exon1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . CDS 6040 6835 . - 0 ID=cds.g1125.t1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . exon 5726 5833 . - . ID=g1125.t1.exon2;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . CDS 5726 5833 . - 2 ID=cds.g1125.t1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . exon 5357 5557 . - . ID=g1125.t1.exon3;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . CDS 5357 5557 . - 2 ID=cds.g1125.t1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . exon 5075 5175 . - . ID=g1125.t1.exon4;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . CDS 5075 5175 . - 2 ID=cds.g1125.t1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . exon 3364 4759 . - . ID=g1125.t1.exon5;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . CDS 3803 4759 . - 0 ID=cds.g1125.t1;Parent=g1125.t1 NODE_1879_length_8747_cov_45.7043 . three_prime_UTR 3364 3802 . - . ID=g1125.t1.utr3p1;Parent=g1125.t1 #PROT g1125.t1 g1125 MAQWRCVVLCAAAIFLSSSCAVASSDRVDAPVEDAPLWCGKPYTTVGSDTTTTNAQAYTRTPTNPAHGIVFVLPDKSLYTWETNAHLIVRKTSGDSIVDGEFYIKARIITEATEDALVIVADGPFTSTALPSVGGHGSYGMIPIDLSQIPVGRITDVACDVIDALTGVAVTSSPITVRFARFPHKHHEVKIDNRMMGLVVDNSSFFPVGFYLDWHGSADFSQLMRTEINNHFNAPLPYRPNGVSDDYIAFMDALADVGGKVNFDMYGLGMSPNSTSKTATITEYVNRIKDHPALLSYYIGDEPDGDGKGLDPQVLIETYALIKELDPYHPVLVVLNCYKNPYHAIEEYLPSCDVMMTDPYCISVQQPVGCDRCEGNVNDVAVRADHFMRVIAGSKPLWIVLQAFGGGEHWLRQPTAREERTMTYLAVISGATGLLYFLENLPHQSLWSACGTLASEIASLAPALLGGRTQRNAVVIFHGNDVSDNSEAHVRAAAYVDPVDGSLVVVACNPSKTPTLFSFAVTDPKWWLAQASVEFEDRTVVLVDSALREPIDALGTRVYRLKHTAQPPPPTGADILQNGGFESSTEVGVVDGFATLNARTDTSQSHTGRFSMRLQCAKGAATPCSSLSSYPPKLASDTKYTLSFWARGSVSGSQLVNSVNVQVGGAGANGTFSVDSSGEWTRFSLGDAFSPPTTAHYGVQVQLLTAGPVWIDDIAIEEIR* # PASA_UPDATE: g1124.t1, single gene model update, valid-1, status:[pasa:asmbl_2886,status:12], valid-1 NODE_1879_length_8747_cov_45.7043 . gene 245 3211 . + . ID=g1124;Name=g1124.t1 NODE_1879_length_8747_cov_45.7043 . mRNA 245 3211 . + . ID=g1124.t1;Parent=g1124;Name=g1124.t1 NODE_1879_length_8747_cov_45.7043 . exon 245 1767 . + . ID=g1124.t1.exon1;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . CDS 245 1767 . + 0 ID=cds.g1124.t1;Parent=g1124.t1;5_prime_partial=true NODE_1879_length_8747_cov_45.7043 . exon 2037 2151 . + . ID=g1124.t1.exon2;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . CDS 2037 2151 . + 1 ID=cds.g1124.t1;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . exon 2354 2414 . + . ID=g1124.t1.exon3;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . CDS 2354 2414 . + 0 ID=cds.g1124.t1;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . exon 2722 2855 . + . ID=g1124.t1.exon4;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . CDS 2722 2855 . + 2 ID=cds.g1124.t1;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . exon 3149 3211 . + . ID=g1124.t1.exon5;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . CDS 3149 3172 . + 0 ID=cds.g1124.t1;Parent=g1124.t1 NODE_1879_length_8747_cov_45.7043 . three_prime_UTR 3173 3211 . + . ID=g1124.t1.utr3p1;Parent=g1124.t1 #PROT g1124.t1 g1124 EKARLSTDSRQASQRLADLTDKLEAAKADADRWKSRCDAATEELSAVKARLADTASGADDGARRAADEDAEKAKRAFTELLEQREKDLAEAKAKSTSAIDALRAELDVALATAASAEKEARAFEQRSRKADELEELLAGSVRARAEAEAKADSADIESAHVRESLTSTERLRQKLAADLELAQSAMASAVAERDGLVERVRLLEEEVETLRAKTAGSTGARDAAAEAAMSERDVAVSRLRDRDAECSTLRREVETLRVAKDKAERTLDEQNYKIRKQGKKSANEAKLWERKVEAEKEAREAAERETETLQGQLEDARTEVTALTETLREMEAAILSKSNATSSGPKRISLNIFGQPQQPHVAGSAVPTTGSPSPSAAAAGAKDVQAAQQQQQQQQAAKRTTWFQTGKGHGRQPSAGATAILTEMKEEDGTAETDAPAAAVPASGVTDASAPAPQGPLEGWVHVPKARGVRNGWDRRWAVLDGGSLLLYARDEGKPLEGLPVDRTFDLGHTVFGAHEVDPAELHHVAAKERPATFQLLLPADLASGEGIGQFMETTKNSGTMVVSVTKESATFFTPIGEVTKSLLVRAVDESDKVRWIAGLAAKATELRDAKNAAAAST* # PASA_UPDATE: g1126.t1, single gene model update, valid-1, status:[pasa:asmbl_2887,status:3], valid-1 NODE_1879_length_8747_cov_45.7043 . gene 7094 8309 . + . ID=g1126;Name=g1126.t1 NODE_1879_length_8747_cov_45.7043 . mRNA 7094 8309 . + . ID=g1126.t1;Parent=g1126;Name=g1126.t1 NODE_1879_length_8747_cov_45.7043 . five_prime_UTR 7094 7145 . + . ID=g1126.t1.utr5p1;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . exon 7094 7160 . + . ID=g1126.t1.exon1;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . CDS 7146 7160 . + 0 ID=cds.g1126.t1;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . exon 7550 7709 . + . ID=g1126.t1.exon2;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . CDS 7550 7709 . + 0 ID=cds.g1126.t1;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . exon 8119 8309 . + . ID=g1126.t1.exon3;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . CDS 8119 8252 . + 2 ID=cds.g1126.t1;Parent=g1126.t1 NODE_1879_length_8747_cov_45.7043 . three_prime_UTR 8253 8309 . + . ID=g1126.t1.utr3p1;Parent=g1126.t1 #PROT g1126.t1 g1126 MAQQQDKAKKKESILDLSRFLDKEIRVKFHGGREVVGNLKGYDPLLNLVLDDTKEFLRDPEDPYRLLDDTRSLGLIVARGMTVVLICPTDGYEQIANPFIQE* # ORIGINAL: g503.t1 original gene structure, not modified by PASA NODE_1545_length_10548_cov_38.7667 AUGUSTUS gene 6470 10325 . + . ID=g503;Name=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS mRNA 6470 10325 . + . ID=g503.t1;Parent=g503;Name=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 6470 6505 . + . ID=g503.t1.exon1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 6470 6505 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 6984 7112 . + . ID=g503.t1.exon2;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 6984 7112 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 7313 7522 . + . ID=g503.t1.exon3;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 7313 7522 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 7720 7878 . + . ID=g503.t1.exon4;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 7720 7878 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 8507 8593 . + . ID=g503.t1.exon5;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 8507 8593 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 8980 9144 . + . ID=g503.t1.exon6;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 8980 9144 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 9489 9727 . + . ID=g503.t1.exon7;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 9489 9727 . + 0 ID=cds.g503.t1;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS exon 10187 10325 . + . ID=g503.t1.exon8;Parent=g503.t1 NODE_1545_length_10548_cov_38.7667 AUGUSTUS CDS 10187 10325 . + 1 ID=cds.g503.t1;Parent=g503.t1 #PROT g503.t1 g503 MSFDMLSSYEEKYIVLYEYEAILDDELGVLKGDIVTVLEKFSDGWYTTRRDKDGQSGKVPGNFLRPFEKDGPTSAPPTPTLQAEVPKPPEKKDMRTNIANEILSTERAYVNHLKALIDKFIEPLQVPKPILSAEDFTTIFSNARTIHGVNDALLLDLEGRMKDWDTESTQLGDIFLKMNAAGACMQSLDSLLLMPIQRIPRYNLLLEDLLKRTPDTHPDHANLSSAVVKMRKVGSDLNENMRRIENELRIINIEKMFPWDPVQLVESNRQFALKRERSKDALRSQTQPNKKGLRDSLIRSDSQNSLSSLQTPSSVSISSVSAVNSAVSVASAASTPRSPHISRGARALSLCDPQGAAIDETVKSVASSEALLDTKTRFVCVCVYVFA* # PASA_UPDATE: g502.t1, single gene model update, valid-1, status:[pasa:asmbl_1925,status:3], valid-1 NODE_1545_length_10548_cov_38.7667 . gene 2527 5525 . + . ID=g502;Name=g502.t1 NODE_1545_length_10548_cov_38.7667 . mRNA 2527 5525 . + . ID=g502.t1;Parent=g502;Name=g502.t1 NODE_1545_length_10548_cov_38.7667 . five_prime_UTR 2527 2581 . + . ID=g502.t1.utr5p1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 2527 2651 . + . ID=g502.t1.exon1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 2582 2651 . + 0 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 2869 2948 . + . ID=g502.t1.exon2;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 2869 2948 . + 2 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 3106 3202 . + . ID=g502.t1.exon3;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 3106 3202 . + 0 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 3494 3621 . + . ID=g502.t1.exon4;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 3494 3621 . + 2 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 3942 4084 . + . ID=g502.t1.exon5;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 3942 4084 . + 0 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 4370 4523 . + . ID=g502.t1.exon6;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 4370 4523 . + 1 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . exon 4937 5525 . + . ID=g502.t1.exon7;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . CDS 4937 5071 . + 0 ID=cds.g502.t1;Parent=g502.t1 NODE_1545_length_10548_cov_38.7667 . three_prime_UTR 5072 5525 . + . ID=g502.t1.utr3p1;Parent=g502.t1 #PROT g502.t1 g502 MRLSNVATACWLLLLILSPIALMGTLVRGQDDDGEDATVEAAVEDVPASEETAGEEGEEKDGTIAALEDVDATILFYSHTEKSFPAGDVVRAAIGFSNKGEKDLLVTKIDGSFRYPQDFNYIIQNFTSLDVGEIVRPNTEASFSYYFRPDPNFDARPFGLIVTVDYIDSQGTSYRSTLFNETIAVTELVEGFDTLTFQLYVTLAGLALLGAFFIQRALGSAIGKSSRKTRAARVETGTRSTATAADNEWLEGLVDQKPQRSPKSKKIR* # PASA_UPDATE: g501.t1, single gene model update, valid-1, status:[pasa:asmbl_1924,status:12], valid-1 NODE_1545_length_10548_cov_38.7667 . gene 302 2119 . + . ID=g501;Name=g501.t1 NODE_1545_length_10548_cov_38.7667 . mRNA 302 2119 . + . ID=g501.t1;Parent=g501;Name=g501.t1 NODE_1545_length_10548_cov_38.7667 . five_prime_UTR 302 305 . + . ID=g501.t1.utr5p1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . exon 302 507 . + . ID=g501.t1.exon1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . CDS 306 507 . + 0 ID=cds.g501.t1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . exon 829 928 . + . ID=g501.t1.exon2;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . CDS 829 928 . + 2 ID=cds.g501.t1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . exon 1176 1287 . + . ID=g501.t1.exon3;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . CDS 1176 1287 . + 1 ID=cds.g501.t1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . exon 1547 1644 . + . ID=g501.t1.exon4;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . CDS 1547 1644 . + 0 ID=cds.g501.t1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . exon 1814 2119 . + . ID=g501.t1.exon5;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . CDS 1814 1910 . + 1 ID=cds.g501.t1;Parent=g501.t1 NODE_1545_length_10548_cov_38.7667 . three_prime_UTR 1911 2119 . + . ID=g501.t1.utr3p1;Parent=g501.t1 #PROT g501.t1 g501 MGSIGCRFAFARTVATGKSKGEFLAMLGVTPTSILLAGYISGTVGVITSDGQPLRKESGPGIFVLETRTCELSCHKLYRAMCLPSEPKHCGYCANGFIEEARDESADATGPTACIELIRDDDEDLFGSSKAKTAIYAVMATMGGLSVLYLIIRVRRARRGAGGNRTSSSGRRYRRLANGTEEIEMLAAANDDEDEIVFDTTR* # PASA_UPDATE: g7367.t1, single gene model update, valid-1, status:[pasa:asmbl_8536,status:3], valid-1 NODE_622_length_20056_cov_42.4876 . gene 12593 14178 . + . ID=g7367;Name=g7367.t1 NODE_622_length_20056_cov_42.4876 . mRNA 12593 14178 . + . ID=g7367.t1;Parent=g7367;Name=g7367.t1 NODE_622_length_20056_cov_42.4876 . five_prime_UTR 12593 12761 . + . ID=g7367.t1.utr5p1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 12593 12807 . + . ID=g7367.t1.exon1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 12762 12807 . + 0 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 13039 13158 . + . ID=g7367.t1.exon2;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 13039 13158 . + 2 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 13260 13325 . + . ID=g7367.t1.exon3;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 13260 13325 . + 2 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 13431 13534 . + . ID=g7367.t1.exon4;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 13431 13534 . + 2 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 13757 13888 . + . ID=g7367.t1.exon5;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 13757 13888 . + 0 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . exon 14025 14178 . + . ID=g7367.t1.exon6;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . CDS 14025 14135 . + 0 ID=cds.g7367.t1;Parent=g7367.t1 NODE_622_length_20056_cov_42.4876 . three_prime_UTR 14136 14178 . + . ID=g7367.t1.utr3p1;Parent=g7367.t1 #PROT g7367.t1 g7367 MSFILDWFWNVLNYLGLANKSAKIVFLGLDNAGKTTLLHMLKDDRLAQHNPTLHPTMEELAIGNIRFKTFDLGGHAQARRVWRDYYPSVDAIVYMIDAADRDRFAESKKELDSLLSSEELGAVPFLILGNKIDNPRAASEDELRSSLGLHNLTTGKGKVALKDIRPIEVFMVTVVKRQGYGEGFRWLSQYIN* # ORIGINAL: g7365.t1 original gene structure, not modified by PASA NODE_622_length_20056_cov_42.4876 AUGUSTUS gene 7229 8401 . - . ID=g7365;Name=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS mRNA 7229 8401 . - . ID=g7365.t1;Parent=g7365;Name=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 8294 8401 . - . ID=g7365.t1.exon1;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 8294 8401 . - 0 ID=cds.g7365.t1;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 8049 8183 . - . ID=g7365.t1.exon2;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 8049 8183 . - 0 ID=cds.g7365.t1;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 7826 7960 . - . ID=g7365.t1.exon3;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 7826 7960 . - 0 ID=cds.g7365.t1;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 7550 7717 . - . ID=g7365.t1.exon4;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 7550 7717 . - 0 ID=cds.g7365.t1;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 7229 7447 . - . ID=g7365.t1.exon5;Parent=g7365.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 7229 7447 . - 0 ID=cds.g7365.t1;Parent=g7365.t1 #PROT g7365.t1 g7365 MSESALDAVPGDRPWTGESTVGLLSAAYVVGLFTLQYIMRDRKPFGLKTISIVHNLGLSAFSLWVFLGITTKVLSNWREENYAPELLVCDPQQKLSHGTGFWFHIFYLSKFYEYLDTLFLVLRKKQVVFLHWFHHFVTPSIVWSSWYFPNASNWIGPLTNAFVHVIMYLYYFAADAGIADRKLGKHVTHVQLSQFVLCLVILMAVGFNIGGCNGNIYGHAWLSVQYAIFLGLFAHFHARRTKQLAQKKSAAKAD* # PASA_UPDATE: g7362.t1, single gene model update, valid-1, status:[pasa:asmbl_8533,status:12], valid-1 NODE_622_length_20056_cov_42.4876 . gene 146 2835 . - . ID=g7362;Name=g7362.t1 NODE_622_length_20056_cov_42.4876 . mRNA 146 2835 . - . ID=g7362.t1;Parent=g7362;Name=g7362.t1 NODE_622_length_20056_cov_42.4876 . five_prime_UTR 2566 2835 . - . ID=g7362.t1.utr5p1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 2452 2835 . - . ID=g7362.t1.exon1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 2452 2565 . - 0 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 2094 2289 . - . ID=g7362.t1.exon2;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 2094 2289 . - 0 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 1858 1980 . - . ID=g7362.t1.exon3;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 1858 1980 . - 2 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 1596 1720 . - . ID=g7362.t1.exon4;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 1596 1720 . - 2 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 1311 1463 . - . ID=g7362.t1.exon5;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 1311 1463 . - 0 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 990 1121 . - . ID=g7362.t1.exon6;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 990 1121 . - 0 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 409 670 . - . ID=g7362.t1.exon7;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 409 670 . - 0 ID=cds.g7362.t1;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . exon 146 248 . - . ID=g7362.t1.exon8;Parent=g7362.t1 NODE_622_length_20056_cov_42.4876 . CDS 146 248 . - 2 ID=cds.g7362.t1;Parent=g7362.t1;3_prime_partial=true #PROT g7362.t1 g7362 MERHCASARPMWALAAVATLIVMALCPAPAMADEHDHIYQPRDEVVLWMNTVGPYHNQQETYEFFSLPFCRGPKQEISHHHETIGEALQGIELEFSGLDVEFLKPVMKSEYCAIDLEEEDYDMFAYAVENHYFYQMYVDDLPLWGMVGDYGQDEADDPNTDHIPAPTDEYYIFTHKSFDFGFNGDRIVDVNLTDQYRVKLTKGAKIRFTYSVSWHPSDITFERRFDKYLDPNFFQHHIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKDDDLDDLERDLGDEYGWKQVHGDVFRAPSALMLFSSLIGTGHQLAMVAMCVIVIAILGDLYTTRGSILTASIFVYAATSPVAGYFGGSFYARHGGKEWIKQMLLSASLFPGTVCGVAFLINFIAIYYQ # ORIGINAL: g7364.t1 original gene structure, not modified by PASA NODE_622_length_20056_cov_42.4876 AUGUSTUS gene 5224 7141 . + . ID=g7364;Name=g7364.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS mRNA 5224 7141 . + . ID=g7364.t1;Parent=g7364;Name=g7364.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 5224 5376 . + . ID=g7364.t1.exon1;Parent=g7364.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 5224 5376 . + 0 ID=cds.g7364.t1;Parent=g7364.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 5483 7141 . + . ID=g7364.t1.exon2;Parent=g7364.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 5483 7141 . + 0 ID=cds.g7364.t1;Parent=g7364.t1 #PROT g7364.t1 g7364 MVWSDGMDAPDVKHVTAVRWHALVLLSFGLANSLLFAGVVFGWPSLAVMLKHEGTYAALCPSYNATSECGLGLPTANGSFAECPSKDEPTTDLACDAQDKRFVLVYQCGVFSLFFSRLFVGILLDKQGPRVCGVGGGILVACGALILALSSASPAHSSFDGFAPAMFLLSFGGTGIHFANFHLANLFPPIRRTLISAFSGVFSVSGMVFFVFLKANEGIGSSRRTLFLAFAGLATLMSFVSLLLQPKKVFAVGEGVRHTCSGAVIVPAVPTVTEPVVVAVPADTLGQSQAQERGRCAWLAALRGGSASAHYRRVRDEREEASGMLLSPISSLGSASAAVTVDGVDGDQTAACQTDSECCKAVNVADPMELGDDAYDDENVGLVAVPESTSPDCTTPIPMAERPLKKQLCTWQFWALLIFFSVGLLQMQFYVATARDQLERKGDVHNSRAAAFNVIGALGFVALPVTGAVLDGAGGFPAAFATVCVLSVVYNIVNAMAMSVASEYAVFALWSVMRFFLFSAFFAYVADEFGPRTFGTVAGLVSLAASLFSLLTYPINALSLDTFGGSFAPAHNFFAGCMTCCAVYPLVLYLSKRQKGAAVAPRA* # PASA_UPDATE: g7368.t1, single gene model update, valid-1, status:[pasa:asmbl_8535,status:3], valid-1 NODE_622_length_20056_cov_42.4876 . gene 14206 19724 . - . ID=g7368;Name=g7368.t1 NODE_622_length_20056_cov_42.4876 . mRNA 14206 19724 . - . ID=g7368.t1;Parent=g7368;Name=g7368.t1 NODE_622_length_20056_cov_42.4876 . five_prime_UTR 19620 19724 . - . ID=g7368.t1.utr5p1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 19485 19724 . - . ID=g7368.t1.exon1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 19485 19619 . - 0 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 19201 19354 . - . ID=g7368.t1.exon2;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 19201 19354 . - 0 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 16019 19063 . - . ID=g7368.t1.exon3;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 16019 19063 . - 2 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 15738 15907 . - . ID=g7368.t1.exon4;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 15738 15907 . - 2 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 15412 15605 . - . ID=g7368.t1.exon5;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 15412 15605 . - 0 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 14739 15087 . - . ID=g7368.t1.exon6;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 14739 15087 . - 1 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . exon 14206 14630 . - . ID=g7368.t1.exon7;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . CDS 14223 14630 . - 0 ID=cds.g7368.t1;Parent=g7368.t1 NODE_622_length_20056_cov_42.4876 . three_prime_UTR 14206 14222 . - . ID=g7368.t1.utr3p1;Parent=g7368.t1 #PROT g7368.t1 g7368 MDAAGATRTASNHDVSALLSTAFPNTNDRSRGAPPDSVFDELLSRIERERRQRLEKVEWLQAHLKDARAGAAAHDRERTRAALVAYADFEKTGLPEGRSRLVELLDTQALRTHHLVLPSAAIVSRSAVDDEGAAHRTQGASSPVRPVPNYLKSTRTFSHRGTGKVFHRYKESEGLEDDEANALRERALEAVRGEDAAARAKVWEESMDPQQRTAERKVLARMNERASFLRNPRNVSGPSSMTSTSGIATSFAADPETVVFSSYAVGQVYEMPIVLRNVDSVGRRVRVLPPASTHFAVLPGRYPATSEGSVAPGMCAHYIVRFLPDSLDDFSDTLHIDVEDGTSFDIALVARREPPVLSLPEVFDLGPCLVGDTVTFTFECTNTGGEGRFSLFTAEQWDSSAVVELADGWDGMAGSFLVTPCVFALQKSESMALSAQFAPSEQGEARLSLVMVCDNCRVRRFELFGFADAPRLSCEGGLDSPTEAAVGRILFGDQHPLVEQSRSVAVKNDTTVDVPFSWECESTDGMFSIDPSCGIFGASSCTNFTVRFNPRELGYWTDRLHLVLTELPPSLQWAARCLPLEVEGMARPIVASLRPPALALSREVCVGETVARVIHVCNNSQSPARFCWRGVTEDGDYAMLTPEEGVVWAFPEEGIVPPTESVQIEVFVRPSRAGPFCESAVCVVENAQPLVLHIEGRAMPPALSVIAGDVDFGLVAMGTFVPRLVTVSNTSPVPTPWTASIWDPFHSDHSDHIAFSPSEGVLAAGESVNVRVTLHPRIAGPVAETLCFIPDGGNSCLLPCHAEVVAPSVCVLPSKMRLEEAYVGVSVTRTVVMRNLTLLPTPFAWEELSSNVNLRATFSPQSGVLDPGQELIVDVSLVAVQTGLLSGALLACSIADGAHYAGLSVDVDVRGLSVSYRSSEGRSLEDNRIDFGLECPIGESRTRTFEIVNHSAISAPFAVFVERYASRRRRPVSGSHVSESPRPGGDGGLALVRTTTGTDKRALALASGNGVAFEVTPAEGWLAPFSTTVVKVEACNDMWGIYEDRVRCDVGGLEPAHLGLRIGVIGSPLHFRATSTGLCMSTNPPSINFGSQPFGEKEVPRMFRVENSSPFDIELDWQVVTRENSEKEKLVDFRVCVDGNGRVAVAVHNHDGAVTENTPFRVTSGERMIVPAKGSAPVHLTFQSAVPGYFSSMLASFMRVPSSATEKNGPWRAQGELTWPLRMALVAHSSEPSLTVDAGRVVRFKCQSADLSPKGRLVVRRTVGIANGLDSPLAFILTTAGPFCVAATECLAAAQLPGRKNAFVLQPKDNMGVTLEFAAEVSMLTKGDRSSDAVLCGSLVIVFSNGSQQVVELEGLISRPRVTLSSVSYDFGTVLVRDSRAFSLEITNVSACEAPFECELVGDGVFSIVGPAEGSLANPAVTRERPRTEGQVAHASAVSIRFAPREPRRYNGLIRVLVEHGGSHEVRLSGFGSVDERMYNADRL* # ORIGINAL: g7366.t1 original gene structure, not modified by PASA NODE_622_length_20056_cov_42.4876 AUGUSTUS gene 9341 12276 . - . ID=g7366;Name=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS mRNA 9341 12276 . - . ID=g7366.t1;Parent=g7366;Name=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 11842 12276 . - . ID=g7366.t1.exon1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 11842 12276 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 11572 11766 . - . ID=g7366.t1.exon2;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 11572 11766 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 11447 11495 . - . ID=g7366.t1.exon3;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 11447 11495 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 10678 10766 . - . ID=g7366.t1.exon4;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 10678 10766 . - 2 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 10474 10585 . - . ID=g7366.t1.exon5;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 10474 10585 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 10267 10373 . - . ID=g7366.t1.exon6;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 10267 10373 . - 2 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 9986 10159 . - . ID=g7366.t1.exon7;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 9986 10159 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 9627 9887 . - . ID=g7366.t1.exon8;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 9627 9887 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 9341 9517 . - . ID=g7366.t1.exon9;Parent=g7366.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 9341 9517 . - 0 ID=cds.g7366.t1;Parent=g7366.t1 #PROT g7366.t1 g7366 MTPLLHLPLRCWRMPVVCVYNANAFIGATSLRRHSHSHSHSSNHAHGNARPVDLRFQTYGLAAASDNNDMPLVVLHGLLGSGRNWTTVARSVAASTGRAVHTLDLRNHGESPHADGMSYPLMAQDVLHFMDTQGIKCAAIAGHSMGGKVAMTVAAQQPTRVGALVVLDISPLKYTSTLEIVGIFEALHSLDLSGHKNRSSIEKALSQNIKDVGLRQFLLTNLRLDPTNGVANGDASFFQKNEGTFSVKVGLAQMLKGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRKDGGVARMSDPKMIKSIMEAVTIPVMAKVRIGHFVEAQILEAIGVDYIDESEVLTPADDVHHISKHNFKVPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGDVVEAVRHMRTVSSEIRRVQVMDDAELYTFAKDIQAPFELVKRTAELGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVQAVTHFRDAKVLAEISEDLGEAMVGINCTQLASADKYSVRGW* # ORIGINAL: g7363.t1 original gene structure, not modified by PASA NODE_622_length_20056_cov_42.4876 AUGUSTUS gene 3250 4895 . - . ID=g7363;Name=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS mRNA 3250 4895 . - . ID=g7363.t1;Parent=g7363;Name=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 4736 4895 . - . ID=g7363.t1.exon1;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 4736 4895 . - 0 ID=cds.g7363.t1;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 4514 4646 . - . ID=g7363.t1.exon2;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 4514 4646 . - 2 ID=cds.g7363.t1;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 3725 4409 . - . ID=g7363.t1.exon3;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 3725 4409 . - 1 ID=cds.g7363.t1;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 3458 3631 . - . ID=g7363.t1.exon4;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 3458 3631 . - 0 ID=cds.g7363.t1;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS exon 3250 3348 . - . ID=g7363.t1.exon5;Parent=g7363.t1 NODE_622_length_20056_cov_42.4876 AUGUSTUS CDS 3250 3348 . - 0 ID=cds.g7363.t1;Parent=g7363.t1 #PROT g7363.t1 g7363 MRYDWRERSGSASLPYVILTRSAPLTRTASLCALLGTAAVLTLLYSPDNFLVDATAYNGTYPLTAPNVLPDGSVEYRIAAVADLDKASRDKEKDEWISHLTIMRLVRAPGGASFTLLDAGGVEAPAGRLKLRSRLNEKGRGMELSELVVFNGRLLSFDDRSGIVYEIDSRTGRTVPRYILPDGDGEEEKGFKCEWATVKDGVLYVGGLGKEWTVGLVFASKVLALLCDRMLLQCQHIWSLTCGPRLPLQTDDGVIEHRNPQWVKTITHRGFIDHTDWAHVYTALRETTGHTYPGYLLHESCVWSAVHRRWFFLPRRASNEPYTEAEDEVRGTNYFVSCDENFSDVRYTRAGPVEPKRGFSSFKFIPLTGDTEVVALKTEEHQGQTSSFLMVFHIDGTVLLEPTYLGQDKLEGIEFV* # PASA_UPDATE: g9026.t1, single gene model update, valid-1, status:[pasa:asmbl_4621,status:3], valid-1 NODE_259_length_28954_cov_39.7213 . gene 24141 27998 . + . ID=g9026;Name=g9026.t1 NODE_259_length_28954_cov_39.7213 . mRNA 24141 27998 . + . ID=g9026.t1;Parent=g9026;Name=g9026.t1 NODE_259_length_28954_cov_39.7213 . five_prime_UTR 24141 24185 . + . ID=g9026.t1.utr5p1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 24141 24479 . + . ID=g9026.t1.exon1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 24186 24479 . + 0 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 24656 25063 . + . ID=g9026.t1.exon2;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 24656 25063 . + 0 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 25341 25457 . + . ID=g9026.t1.exon3;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 25341 25457 . + 0 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 25649 25734 . + . ID=g9026.t1.exon4;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 25649 25734 . + 0 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 26100 26662 . + . ID=g9026.t1.exon5;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 26100 26662 . + 1 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 26913 27481 . + . ID=g9026.t1.exon6;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 26913 27481 . + 2 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . exon 27674 27998 . + . ID=g9026.t1.exon7;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . CDS 27674 27889 . + 0 ID=cds.g9026.t1;Parent=g9026.t1 NODE_259_length_28954_cov_39.7213 . three_prime_UTR 27890 27998 . + . ID=g9026.t1.utr3p1;Parent=g9026.t1 #PROT g9026.t1 g9026 MRPLIALAAIVAAVVWSACNASALSTAALVTPLPIEVTYDGRALIIGGERQLIVSGSIHYPRSTPEMWPDILALAKTSGVNMIQTYVFWNSHEPVRGQYDFSDNLDLVRFLRECQRQGLWVNLRIGPYVCAEWNFGGFPEWLRRIDGIEFRTYNQPYMLEMERWVRFIVDKVSQEGLFAPQGGPIVIAQIENEYGNVEASYGDGGKKYVQWCANLALSMKIDVPWIMCQQEDAPAPIVNTCNGFYCDGFRPSNKNAFSAFTENWPGWFQLWSEPRPHRPSEDVAFSVARFYARGGTLSNYYMYHGGTNFGRTVGGPFITTSYDYDVSIDEYGRPSEPKYSHLAALHALLQKHRHTIVGVDVPPTESLGGSLEAHTYNATVAVVNGTCIAFLSNPTTTDAKASYRGATYTLPAWSVSILDGCEGEVVYNTATITHAPSVRTYVPTIRLTEESFAWVEEPLGADASAAADHSPIVTANAPIEQLTLTNDTTDYVWYAVDIPIVKATDGANVTVELTQFADFAYVFLGSELSLSGGQAGPDASFALAVNATSSLEATTVTLNILTTTLGLTNYGAFLEKITRGILGKVLVGGAAEGTNSTWRHSIGLWGERQRLYAVDADARHVTAHVWKTGPVPTDAPNVWMRALFATPDGNNPVVLDLKGLSKGMAWINGRSIGRYWLKMVPQSAACNACDYRGAYSPDKCRTGCEDYSQRYYHVPREWLSADGRPNTVVLFDEQKRSFEDVAVATVLYAA* # ORIGINAL: g9021.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 6696 7330 . + . ID=g9021;Name=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 6696 7330 . + . ID=g9021.t1;Parent=g9021;Name=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 6696 6722 . + . ID=g9021.t1.exon1;Parent=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 6696 6722 . + 0 ID=cds.g9021.t1;Parent=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 6845 6866 . + . ID=g9021.t1.exon2;Parent=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 6845 6866 . + 0 ID=cds.g9021.t1;Parent=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 7098 7330 . + . ID=g9021.t1.exon3;Parent=g9021.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 7098 7330 . + 2 ID=cds.g9021.t1;Parent=g9021.t1 #PROT g9021.t1 g9021 MGCGYSEPITTVTYSTGPGQQTQVIRVGDGYGGGTSVVTGGYGGATVVKGGYAYGGAPVVMTGAYPPPYGQVAYAQPAYATTTTTTIINNDGW* # ORIGINAL: g9022.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 8186 10516 . - . ID=g9022;Name=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 8186 10516 . - . ID=g9022.t1;Parent=g9022;Name=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 10241 10516 . - . ID=g9022.t1.exon1;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 10241 10516 . - 0 ID=cds.g9022.t1;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 9840 10097 . - . ID=g9022.t1.exon2;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 9840 10097 . - 0 ID=cds.g9022.t1;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 8935 9573 . - . ID=g9022.t1.exon3;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 8935 9573 . - 0 ID=cds.g9022.t1;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 8186 8671 . - . ID=g9022.t1.exon4;Parent=g9022.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 8186 8671 . - 0 ID=cds.g9022.t1;Parent=g9022.t1 #PROT g9022.t1 g9022 MHLRCKWGASCGEKFPDGNALSRHLLSHVNDTPGSQPCLWHGCQHARGRPIRKNHLRDHVVAAHSGYTPACPDCGKSFRWGKSLAKHKEKCMEGLKTLVSSVSLGDTILAIDRQYKGFFLRKKQTWAFMEDGMDVLMKVLSSVRVSLASDCGNSNAVLGPAHMKAASYVLQNLACFGQVVLADMSLAVAAADTAVVAAGRVATEAPLDYAAALAARAAVNGSRRRVDDAISDALVALRIRRESLGNDHPDVATTYHNLASMYKLKGTPDALNEADACYRKALDIRAPDHVELETDRATTLHNYALLIGMAGRTDDAISYLATDVDVAERTLGPGHPHIATASENLAMMLFRKGQYSDARSLLRRSVCIREKALRPDHPDVAEALEKLGYLEMTFAREHRDVDAFSEALQHLSAVTRIYEGRAPLSSDPAGIAELRLALAYHNIGVVCHEMHALSGQSVPHGILEGVRDQVAVRMARFAQSDEAATCAQSQSEGAAEAATSSCVVEICDALKACKMEDGDGPLIMRDAGGGRDHPYFCSPLKSGGCAGHVWCT* # ORIGINAL: g9027.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 28140 28852 . - . ID=g9027;Name=g9027.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 28140 28852 . - . ID=g9027.t1;Parent=g9027;Name=g9027.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 28140 28852 . - . ID=g9027.t1.exon1;Parent=g9027.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 28140 28852 . - 2 ID=cds.g9027.t1;Parent=g9027.t1 #PROT g9027.t1 g9027 VLIGDPAPWIYNDSTLLRFVITWLAINYTPGDIVNRALDTRAGWYFLTFFEGVSNGFTATSWGMDRALHSSDPRMSSSVTAAFVCAMCAYCAGMVVTEAMGLRRAHWAYSTPHSLVHTTPDMFLLPLLSAIAYYAVADPHGHVMTYTGVSLPVTAAEIKAALVVVHTLYIFYPIGSGLPQAPSASPTTHDKHAIPLAADGAEETASHARGHLHANKPRANESTPVRRSARQAVKTD* # ORIGINAL: g9020.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 167 6008 . - . ID=g9020;Name=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 167 6008 . - . ID=g9020.t1;Parent=g9020;Name=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 5860 6008 . - . ID=g9020.t1.exon1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 5860 6008 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 5610 5662 . - . ID=g9020.t1.exon2;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 5610 5662 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 5344 5431 . - . ID=g9020.t1.exon3;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 5344 5431 . - 2 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 4842 5155 . - . ID=g9020.t1.exon4;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 4842 5155 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 4382 4451 . - . ID=g9020.t1.exon5;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 4382 4451 . - 2 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 4008 4130 . - . ID=g9020.t1.exon6;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 4008 4130 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 3705 3811 . - . ID=g9020.t1.exon7;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 3705 3811 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 3331 3573 . - . ID=g9020.t1.exon8;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 3331 3573 . - 2 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 2996 3071 . - . ID=g9020.t1.exon9;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 2996 3071 . - 2 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 2599 2689 . - . ID=g9020.t1.exon10;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 2599 2689 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 2167 2292 . - . ID=g9020.t1.exon11;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 2167 2292 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 1916 2029 . - . ID=g9020.t1.exon12;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 1916 2029 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 1624 1718 . - . ID=g9020.t1.exon13;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 1624 1718 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 1131 1206 . - . ID=g9020.t1.exon14;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 1131 1206 . - 1 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 814 996 . - . ID=g9020.t1.exon15;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 814 996 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 574 690 . - . ID=g9020.t1.exon16;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 574 690 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 167 325 . - . ID=g9020.t1.exon17;Parent=g9020.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 167 325 . - 0 ID=cds.g9020.t1;Parent=g9020.t1 #PROT g9020.t1 g9020 MGASASGLSAGEVDRRPLLSRLAADRPIPAEDAAFWRDLFTLGIPPVATSDDVRAIESSAAGLLRRFASSFTLSGNFASLVDRCIEAVSDCHNKKGSAHTPVAARNAVLLVRIASHHLIEDADWDAFCHSLGIDPDATHAAELSQRPQSTATATLAPPSGNSASGGASGGLPRSDSHGADITSMLAPASQALPPVPAAAQTDPSGFRGQRLMLALTDLVLDLEVNADTYDVVVEAMDCLIVLLGSQVYASSTDANPFFVILMGMERSRAAGLVRTCLSLFVTQPQPAEEPANILSTIGWAASSLFTVPVTAVSYLFTRHDSTDEDIVRSPVADRAVMLLLALVNQWRSESASYAPQRTGDGNRLLVARNPFRAALCGFKDTHVFDGEGERARPPFRMGYGVIYEALCRGPPVLLLYDLLHGNEDFLSYVLSRTDVEALVVPLLRLLYRAPELDAQQVYMLLIVLLVLTQDKPFCAGIHGVMLPTATWLTERLVSNISLGSVVVIVLVRTVQYNLAKTRDVYLHTNCLAALANLSAHMKTLHPYAAQRMVSLFDMLAKKFTRLQQQAGGAAVDSQENSELAMYADFVRIVLEILNAYLVHGLHHNPHLLYTLLYKRSMFDVFAKDPRFADIVSNIDTVLSYFASRLDDTARHNVSVDVVMAIIEKAAHQFPLSRLKRFPELKFKYEEEESPDEFFVPYVWSLVHAAGWYGWTPDKIQLFAPHVHEAAS* # ORIGINAL: g9024.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 13581 17990 . - . ID=g9024;Name=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 13581 17990 . - . ID=g9024.t1;Parent=g9024;Name=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 17739 17990 . - . ID=g9024.t1.exon1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 17739 17990 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 17338 17588 . - . ID=g9024.t1.exon2;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 17338 17588 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 16912 17131 . - . ID=g9024.t1.exon3;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 16912 17131 . - 1 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 16084 16274 . - . ID=g9024.t1.exon4;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 16084 16274 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 15625 15802 . - . ID=g9024.t1.exon5;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 15625 15802 . - 1 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 15028 15169 . - . ID=g9024.t1.exon6;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 15028 15169 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 14534 14685 . - . ID=g9024.t1.exon7;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 14534 14685 . - 2 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 14040 14171 . - . ID=g9024.t1.exon8;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 14040 14171 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 13581 13757 . - . ID=g9024.t1.exon9;Parent=g9024.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 13581 13757 . - 0 ID=cds.g9024.t1;Parent=g9024.t1 #PROT g9024.t1 g9024 MADGDDSNVTVGDNASVQDATAESDKARPAAQTASEQWIDALYDPVASAYAFSWHMDLTDVAADGDSKLVIAHLGTGDYGMKLKFYKGSSTVHESALLDTPTALLSLYIDDNIPRTPVVTVASGSAIFVYRNFRAYYKFNMPALLASGSGDESASTASPSLITCMAKLNRNIPDEDAVSCLVVGTEDGWVCVIDPAGFAIVFKTRLPSVPTVIETSGVFAVEHRLIVACRNGMVYTVKGGKLSSPPIEPGALSVGIVRLDKSVLVACSDSTVQSFSLRGKRQWTARLPAVPYAVTSLNLRTRNLRAMIVSLANGEVRIYNEHELVSSFMAPDVVRGIVFGKYGREDGALAMATVGGGLIIKYLKRAATLDRNVVSVTDAAAMDAAQRNSLAIPKMSRLFAAQAEREKEHAPEIHRLFQKDLQRLRLSGARAYAKTLTGSLNSVGSTFASSSSVDISLKLNAQVIGMGPFFKVVMEIQNIGKRAAVDVPLVIACNPEVYALDTHVIRLPMLVPGPVYREEVFVECLTQSGLADKVKVTVCDPSSPAAIVTATISMPPSEILIDSV* # ORIGINAL: g9023.t1 original gene structure, not modified by PASA NODE_259_length_28954_cov_39.7213 AUGUSTUS gene 11302 12876 . + . ID=g9023;Name=g9023.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS mRNA 11302 12876 . + . ID=g9023.t1;Parent=g9023;Name=g9023.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS exon 11302 12876 . + . ID=g9023.t1.exon1;Parent=g9023.t1 NODE_259_length_28954_cov_39.7213 AUGUSTUS CDS 11302 12876 . + 0 ID=cds.g9023.t1;Parent=g9023.t1 #PROT g9023.t1 g9023 MRAVMLTGNESAAFGTMCSTLDTYATFIGTENKRRVASMTDQWTRLATAVDPPTCPTGPLVHTLQTDTVETCDGSAIDSAAASKSPTSPPHSPLHVKWGHSATRVVAITAGGALADLGACSGTRVGSIDGRNSRKGRFAVVHSSASVGSQGGVFHARRLVIATGHVLKERPGWATSPSSPSRAIVGSEGLRHALRAASGTGRCPDIARQRRDLARALSHYPLVSPMNDNADIKSAHGDESSSSPVESVMRIALAGRGATMHEVIKILERLLRRPDKTEHDQNGRLTYWYALEGASNVRVEIVVYSSLDPAANEELYALFERTVVKEIPRLNSGGDLVSGQYGPASEYEHHTRAVRARLRSLHSSGTLRLESGAFAWDAAVVNADGSIQAAVSRPWVPPLPPELLHGPRHALSVVIDCAPYTHLSRKSGFATHDVATGSNVLSVFLSDLYSQGVLRWGLNTGIPEVVPEYQHLVAVGGAGFTMPFEWNVFEWEKQGSAMCELLGLHELQYRKHCDNPPPAKDGAT* # PASA_UPDATE: g9025.t1, single gene model update, valid-1, status:[pasa:asmbl_4620,status:3], valid-1 NODE_259_length_28954_cov_39.7213 . gene 18478 23909 . + . ID=g9025;Name=g9025.t1 NODE_259_length_28954_cov_39.7213 . mRNA 18478 23909 . + . ID=g9025.t1;Parent=g9025;Name=g9025.t1 NODE_259_length_28954_cov_39.7213 . five_prime_UTR 18478 19275 . + . ID=g9025.t1.utr5p1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . five_prime_UTR 19448 19472 . + . ID=g9025.t1.utr5p2;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . five_prime_UTR 19621 19692 . + . ID=g9025.t1.utr5p3;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 18478 19275 . + . ID=g9025.t1.exon1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 19448 19472 . + . ID=g9025.t1.exon2;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 19621 19853 . + . ID=g9025.t1.exon3;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . CDS 19693 19853 . + 0 ID=cds.g9025.t1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 20217 20393 . + . ID=g9025.t1.exon4;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . CDS 20217 20393 . + 1 ID=cds.g9025.t1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 20543 21076 . + . ID=g9025.t1.exon5;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . CDS 20543 21076 . + 1 ID=cds.g9025.t1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . exon 21342 23909 . + . ID=g9025.t1.exon6;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . CDS 21342 23781 . + 1 ID=cds.g9025.t1;Parent=g9025.t1 NODE_259_length_28954_cov_39.7213 . three_prime_UTR 23782 23909 . + . ID=g9025.t1.utr3p1;Parent=g9025.t1 #PROT g9025.t1 g9025 MRGPERFLVPILSYGPNNEYSGFVESMIIARALNRTLVLPPFFIHYQDRPRSTRHAYAFEETFDPIPLHDFVPIIDLSSFLAMTGGDIGCIAEMRHDADGQLAELKFVRAAKRILRGQDVGPPHGSLPGDDESESDDSLVFLRRVYVRKAWFTQRSDIQLRMGNGREFNVCEGPGAPKDNAGEGVAVDDSESAVDERADSVPEGDDGGSASGGSGGSKKKNDVMSFRECYEARRCVAERHVALGAPYMNLLYAYDVNYPIIAERSEGSRIEYMAALRHLKHAQWVIDAADRFLSMWGSVREGSRVLAVHLRRQVRNDRKCLPNMPSVSCGDEITTDMLIALISAEVAQGGYTRVFLATNARNDTEVSLLRRALPLVRLEDGTRLDARLLKQTSENYAASLVEQAICTRAAGFMGSRLSTWSQFVANQRAAQGHGNAMYIEDSLKNTRDIAVAEKLAREFHQRFSRVGGVASSFDVFSDGVRADAARDKGHEGEAERVRRAAFEGRFLFPVTVGDFAMQVLGVVESAAASNVLNRTLVLQDVYARDGRTGHPFHYLFDVHHFNQLVPLAPFNAFVERCVPDIDAMMAEFAAQAALSKPNDRRRPVGEHAAEGEDVFARAAAVTKKHGKYHRGVAVAYLRADDPVQGGSLVEADRRSNAHTMPPGSLRRTPVTKMRFDSVRDIAERLSFPDVCMGLGYPFQSIHHVTAAGLQLKANALRWEYMHALRHLRPSLRLSLRADGFALRHHGMRVLAVHIDRRYGRAVNGREPLCNGETGHAVTCGERYTPGHVGRVVRWHLRKLGLRTVLLVGCDGIDTASHPDVRAMAINDGEFVILKYDAASGGFASALTTLTRASDVPVNGANGANSVNSANGGVNARVGLADSDSALMDAPRKVGRPSIFDDEGDASHGRRGRRRASPLTAGDGGSDQTPDPLVAELETRVVELELAFRAHAFIGCRLSPFSQLAYQRRLAHAKWARTIFFEDIQIDPQSTGLWRYEEGFWHRAFEMVMLLPEDQNEPDAPDVDAPRGSGHVSSQPQFPRRAAIARVNGLNDEDDEETEEGQDSAERRPRGDGRAQDSSGKGEDERDAERRASSEEEGDAGGEA* # PASA_UPDATE: g562.t1, single gene model update, valid-1, status:[pasa:asmbl_2499,status:3], valid-1 NODE_1744_length_9440_cov_37.9697 . gene 2583 5535 . - . ID=g562;Name=g562.t1 NODE_1744_length_9440_cov_37.9697 . mRNA 2583 5535 . - . ID=g562.t1;Parent=g562;Name=g562.t1 NODE_1744_length_9440_cov_37.9697 . five_prime_UTR 5477 5535 . - . ID=g562.t1.utr5p1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 5245 5535 . - . ID=g562.t1.exon1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 5245 5476 . - 0 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 4858 4937 . - . ID=g562.t1.exon2;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 4858 4937 . - 2 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 4459 4522 . - . ID=g562.t1.exon3;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 4459 4522 . - 0 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 3947 4122 . - . ID=g562.t1.exon4;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 3947 4122 . - 2 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 3413 3730 . - . ID=g562.t1.exon5;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 3413 3730 . - 0 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . exon 2583 2888 . - . ID=g562.t1.exon6;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . CDS 2694 2888 . - 0 ID=cds.g562.t1;Parent=g562.t1 NODE_1744_length_9440_cov_37.9697 . three_prime_UTR 2583 2693 . - . ID=g562.t1.utr3p1;Parent=g562.t1 #PROT g562.t1 g562 MDGSISLDPVPEYTGINGVDPRTLTNKPIIAVYHVQEPEDAWNVSIMHLKCVSMIPCFWPLLPFVAPFMCTTAFNLQESAKVTMLILTTEEVILHIQDHPQCGVCCGNACKGGHRSVSLRYESITEVLLRPPNGEGDGLCCQPTFKYLGILSGSYSQVRLDTDANNRTQVRIVPEIEVWGLRESDQVRLKITEMQAKCRPQQPFIVGVPIVVQQPAIIQNPGYVVQPQVQYGQPQYGQPQYGQPQYGQPQYGQPQYGQPQYGQPQPQYGQPQPLAPPQTQSPAPSGKRVQVALAVNPVARKVVGVPSSMLEFRTAIAQKFGIESGKVKGIFTEGGAEVDDVNDIRDNDVLIVRE* # PASA_UPDATE: g563.t1, single gene model update, valid-1, status:[pasa:asmbl_2500,status:12], valid-1 NODE_1744_length_9440_cov_37.9697 . gene 6576 9353 . - . ID=g563;Name=g563.t1 NODE_1744_length_9440_cov_37.9697 . mRNA 6576 9353 . - . ID=g563.t1;Parent=g563;Name=g563.t1 NODE_1744_length_9440_cov_37.9697 . five_prime_UTR 9352 9353 . - . ID=g563.t1.utr5p1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 9214 9353 . - . ID=g563.t1.exon1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 9214 9351 . - 0 ID=cds.g563.t1;Parent=g563.t1;5_prime_partial=true NODE_1744_length_9440_cov_37.9697 . exon 8937 9020 . - . ID=g563.t1.exon2;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 8937 9020 . - 0 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 8338 8470 . - . ID=g563.t1.exon3;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 8338 8470 . - 0 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 8009 8094 . - . ID=g563.t1.exon4;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 8009 8094 . - 2 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 7621 7773 . - . ID=g563.t1.exon5;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 7621 7773 . - 0 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 7201 7389 . - . ID=g563.t1.exon6;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 7201 7389 . - 0 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . exon 6576 6899 . - . ID=g563.t1.exon7;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . CDS 6858 6899 . - 0 ID=cds.g563.t1;Parent=g563.t1 NODE_1744_length_9440_cov_37.9697 . three_prime_UTR 6576 6857 . - . ID=g563.t1.utr3p1;Parent=g563.t1 #PROT g563.t1 g563 SIHFLLVPEVREQDAAESSIVRAVERMQTVIDLARVVRERKTFPIKYPLPELVIIHPNEEYRRDIESLADFVVDELNVRKLTVTANEADFGVSYRAEGNPQLGKTLKGKFQSVGKAIKALDNEAIKAFQQSGSIVVEGETLGSDDIKIVRVFAQGGDRYDSNSDSDVLVLLDVKPDQAMRDEGTARETKNRVQKLRKKANLKPTDPIGLFYAVPKDDAEVRLGHVISASQADFLSKALKQPLLAKDQMPADAEVIITEDSKIKGAELKLWITRA* # ORIGINAL: g561.t1 original gene structure, not modified by PASA NODE_1744_length_9440_cov_37.9697 AUGUSTUS gene 841 2136 . + . ID=g561;Name=g561.t1 NODE_1744_length_9440_cov_37.9697 AUGUSTUS mRNA 841 2136 . + . ID=g561.t1;Parent=g561;Name=g561.t1 NODE_1744_length_9440_cov_37.9697 AUGUSTUS exon 841 2136 . + . ID=g561.t1.exon1;Parent=g561.t1 NODE_1744_length_9440_cov_37.9697 AUGUSTUS CDS 841 2136 . + 0 ID=cds.g561.t1;Parent=g561.t1 #PROT g561.t1 g561 MTTQTSSSSGEDAVVAPDVSASSDAKFADPELFARAKRAFEESRVACGTGRPPSSMAASRGPQRTYLAVVRDRLRQQAQHDQNNALSPPSHTGVTTMRKSRQYTVEDDRRIVALLLQGKGWREIERILGKTNVMCRVRNALDPALRAGAFTKEEDAAIFAHVETHGPEKWSLLSEKMGYIRSSWSLCERYTYALRTDVKKGSWSDEERRRLLEGIASHGRDWIAVAGHVGTGRTARSCRVAVMYLFQSFGVRQKRFTPDEDDRLRRAIEQHGRLRWSKVGEDVKGRPLEALRDRYDAIIPKWLRAPYSADVRASLRALLRTDGIDVESELIYITGHVDAAKGWVALELGMDDGSQVDWARVNGASGAERSAALDAVEKEIVPRVTAEEWKEGASAVWVPVWRWERPICTGRKAPIAAVANHPLIKGFVCCK* # PASA_UPDATE: g6826.t1, single gene model update, valid-1, status:[pasa:asmbl_6204,status:12], valid-1 NODE_3551_length_3225_cov_49.4276 . gene 346 2343 . + . ID=g6826;Name=g6826.t1 NODE_3551_length_3225_cov_49.4276 . mRNA 346 2343 . + . ID=g6826.t1;Parent=g6826;Name=g6826.t1 NODE_3551_length_3225_cov_49.4276 . exon 346 522 . + . ID=g6826.t1.exon1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 346 522 . + 0 ID=cds.g6826.t1;Parent=g6826.t1;5_prime_partial=true NODE_3551_length_3225_cov_49.4276 . exon 748 909 . + . ID=g6826.t1.exon2;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 748 909 . + 0 ID=cds.g6826.t1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . exon 1147 1270 . + . ID=g6826.t1.exon3;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 1147 1270 . + 0 ID=cds.g6826.t1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . exon 1436 1511 . + . ID=g6826.t1.exon4;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 1436 1511 . + 2 ID=cds.g6826.t1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . exon 1638 1734 . + . ID=g6826.t1.exon5;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 1638 1734 . + 1 ID=cds.g6826.t1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . exon 1888 2343 . + . ID=g6826.t1.exon6;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . CDS 1888 2322 . + 0 ID=cds.g6826.t1;Parent=g6826.t1 NODE_3551_length_3225_cov_49.4276 . three_prime_UTR 2323 2343 . + . ID=g6826.t1.utr3p1;Parent=g6826.t1 #PROT g6826.t1 g6826 TGQLGIGKPNTASLPSPIEVGGVLKDQKVASIACGAEFSVIVTEEGAVYSFGSAEYGQLGHGGTGEHISKANKIGFSHEFAPRRLDFFVAANAKVSDVACGTNHVIVVTTDKKVFTWGFGGYGRLGHGEQKDEFYPREIKMFARPGFGARLIAAGSTSSYAVSDTGATYFWGITKKAGDSTMYPKQVVDLSGWNVRSVSCGLTSTVVAADNKVISWGPSPTYGELGYGNGQPKSSTTPKIVEPLEGVYILRVASGYGHTLCIARVTSETERAAVDALPVFGSAASFSAAETHEDGRPPAKKARISKTASSTAEVPIEGGDIDAGASRGRGVGRGRGRGRGRGRASDGNGTGVPGVH* # PASA_UPDATE: g4925.t1, single gene model update, valid-1, status:[pasa:asmbl_573,status:3], valid-1 NODE_1151_length_13522_cov_44.4697 . gene 1297 4367 . - . ID=g4925;Name=g4925.t1 NODE_1151_length_13522_cov_44.4697 . mRNA 1297 4367 . - . ID=g4925.t1;Parent=g4925;Name=g4925.t1 NODE_1151_length_13522_cov_44.4697 . five_prime_UTR 3951 4367 . - . ID=g4925.t1.utr5p1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 3836 4367 . - . ID=g4925.t1.exon1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 3836 3950 . - 0 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 3224 3339 . - . ID=g4925.t1.exon2;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 3224 3339 . - 2 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 2820 2927 . - . ID=g4925.t1.exon3;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 2820 2927 . - 0 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 2417 2473 . - . ID=g4925.t1.exon4;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 2417 2473 . - 0 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 2087 2278 . - . ID=g4925.t1.exon5;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 2087 2278 . - 0 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . exon 1297 1943 . - . ID=g4925.t1.exon6;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . CDS 1737 1943 . - 0 ID=cds.g4925.t1;Parent=g4925.t1 NODE_1151_length_13522_cov_44.4697 . three_prime_UTR 1297 1736 . - . ID=g4925.t1.utr3p1;Parent=g4925.t1 #PROT g4925.t1 g4925 MARPVPPPEQSVITQVTRENEGLIPTMSKRDTSISLVEDEKKTKQGFFSRLLCCIKPSENLGEITRPLENPEARNDSSGWNGKQLLPPLRACDVRKKCLVLDLDETLVHSSFKPVAGADFIVPVEIDGITHQVYVLKRPYVDLFLKRCGELFECILFTASLAKYADPVTDLLDKNNLFRTRLFREACVQHRGNFVKDLSRLGRDLRHVIIIDNSPASYIFHPENAIPIGSWFDDVNDKELLDLLPFLEDLTRVDDVCKILDSKR* # ORIGINAL: g4924.t1 original gene structure, not modified by PASA NODE_1151_length_13522_cov_44.4697 AUGUSTUS gene 319 675 . + . ID=g4924;Name=g4924.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS mRNA 319 675 . + . ID=g4924.t1;Parent=g4924;Name=g4924.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS exon 319 675 . + . ID=g4924.t1.exon1;Parent=g4924.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS CDS 319 675 . + 0 ID=cds.g4924.t1;Parent=g4924.t1 #PROT g4924.t1 g4924 APAAFGLTSFLLHEGYNHNRIRRHLAAFSISAPVSAVLTLIFLQYRSAAEQDDGTASLTTGLALLLSGGTFLYVATVHVLPEINTGQMEGSAETKRSNFVAMVAGTIVPLFMAAGHSH* # ORIGINAL: g4927.t1 original gene structure, not modified by PASA NODE_1151_length_13522_cov_44.4697 AUGUSTUS gene 10605 12456 . - . ID=g4927;Name=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS mRNA 10605 12456 . - . ID=g4927.t1;Parent=g4927;Name=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS exon 11674 12456 . - . ID=g4927.t1.exon1;Parent=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS CDS 11674 12456 . - 0 ID=cds.g4927.t1;Parent=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS exon 11197 11348 . - . ID=g4927.t1.exon2;Parent=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS CDS 11197 11348 . - 0 ID=cds.g4927.t1;Parent=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS exon 10605 10716 . - . ID=g4927.t1.exon3;Parent=g4927.t1 NODE_1151_length_13522_cov_44.4697 AUGUSTUS CDS 10605 10716 . - 1 ID=cds.g4927.t1;Parent=g4927.t1 #PROT g4927.t1 g4927 MSGACNCSSGWTGATCESPCAALQYGNGCSSICNCMNGATCDRFTGKCACGNGWTGAACTTECESGFYGADCGNGCKCEAGATCERFNGVCEALKPPADLPKSKADATVEVAFKMDITPAEFRLRYEDAFKSSIAAALQTALNGGVVVRRRSFLPGPRPMAARPYGRHDGSDDETAGSRAARSVTVTADNVKITDVYSVDGMVRVIFYVENTGATATDPGTAVTAAIPRDTIKQAVVASQDSIASSVSASANDMKVADGYATNTQVRPTNNSSSGSSGNTAAIAAGAAVGGVALVAAAVGGAFLYRRRKSSASHFIRRPKGRDDGMEALGESEMKTTTNPVHAYQFTF* # PASA_UPDATE: g4926.t1, single gene model update, valid-1, status:[pasa:asmbl_574,status:3], valid-1 NODE_1151_length_13522_cov_44.4697 . gene 4993 8887 . - . ID=g4926;Name=g4926.t1 NODE_1151_length_13522_cov_44.4697 . mRNA 4993 8887 . - . ID=g4926.t1;Parent=g4926;Name=g4926.t1 NODE_1151_length_13522_cov_44.4697 . five_prime_UTR 8794 8887 . - . ID=g4926.t1.utr5p1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 8779 8887 . - . ID=g4926.t1.exon1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 8779 8793 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 8496 8627 . - . ID=g4926.t1.exon2;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 8496 8627 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 7799 8385 . - . ID=g4926.t1.exon3;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 7799 8385 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 7365 7632 . - . ID=g4926.t1.exon4;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 7365 7632 . - 1 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 6747 7189 . - . ID=g4926.t1.exon5;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 6747 7189 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 6407 6491 . - . ID=g4926.t1.exon6;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 6407 6491 . - 1 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 6017 6193 . - . ID=g4926.t1.exon7;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 6017 6193 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 5740 5840 . - . ID=g4926.t1.exon8;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 5740 5840 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 5246 5591 . - . ID=g4926.t1.exon9;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 5246 5591 . - 1 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . exon 4993 5146 . - . ID=g4926.t1.exon10;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . CDS 5096 5146 . - 0 ID=cds.g4926.t1;Parent=g4926.t1 NODE_1151_length_13522_cov_44.4697 . three_prime_UTR 4993 5095 . - . ID=g4926.t1.utr3p1;Parent=g4926.t1 #PROT g4926.t1 g4926 MQDENRAPLSVLSGNVAPASTLQSRLKPPTRIVRVDNANLTPSDFPVNEAWKPSVPSMTTSDAMQFVLGEQTSAPSTAPTTTTQPQLSATSHLKRKASVTDLSKTALPTKTPRTTSATVKPVRKAPTTTVPRVAARTGVSATQKPTARKMDGAAAANAAADALRKKRAAWDYKGRLEDMEGMTEELKEEIRNSQGTVAQLTNQVVFSHEKMEMLERLRLQLESTVLVKERESTEVSTELSRMKARITDMESDHASTTALMRSRHAAEIEGLTMTHNALQRRYDESTEELRLAREEIMGLKSTISRMSTDAVAVESQLRSVRAALDSATDQNVHKDKEIASNNARIASLEASVAQLEARSRDEELVRRKLHNTIQELRGNIRVFCRVRPLLGGEVAEAQTSTTAAALDFPDQSLERKTIGVNDFGETFSGKSAKRTEFAFDRVFGPTSSQGEVFEEISQLVQSALDGYNVCIFAYGQTGSGKTFTMEGPPANQINDATIGMIPRAVAQIFESARALSSKGWTYEMEASFLEIYNETIRDLLGDGDPNKKHDIRLTPDGTGIYVTDATLCQVASEGAVFGLLKQANRNRAVAETQCNERSSRSHSVFRLRLVGRNSLTGDSSEGTLNLIDLAGSERLSSSGSKGDRLKETQCINKSLSNLGNVIMALANKDNHIPYRNSKLTHLLQNSLGGNSKTLMFVNVAPNRESLGETICSLRFATKVNSCQIGTAQQKKGAN* # PASA_UPDATE: g13558.t1, single gene model update, valid-1, status:[pasa:asmbl_2901,status:3], valid-1 NODE_1882_length_8739_cov_39.598 . gene 7024 8327 . - . ID=g13558;Name=g13558.t1 NODE_1882_length_8739_cov_39.598 . mRNA 7024 8327 . - . ID=g13558.t1;Parent=g13558;Name=g13558.t1 NODE_1882_length_8739_cov_39.598 . five_prime_UTR 8134 8327 . - . ID=g13558.t1.utr5p1;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . five_prime_UTR 7786 7850 . - . ID=g13558.t1.utr5p2;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . exon 8134 8327 . - . ID=g13558.t1.exon1;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . exon 7581 7850 . - . ID=g13558.t1.exon2;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . CDS 7581 7785 . - 0 ID=cds.g13558.t1;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . exon 7370 7484 . - . ID=g13558.t1.exon3;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . CDS 7370 7484 . - 2 ID=cds.g13558.t1;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . exon 7024 7220 . - . ID=g13558.t1.exon4;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . CDS 7127 7220 . - 1 ID=cds.g13558.t1;Parent=g13558.t1 NODE_1882_length_8739_cov_39.598 . three_prime_UTR 7024 7126 . - . ID=g13558.t1.utr3p1;Parent=g13558.t1 #PROT g13558.t1 g13558 MGCSSSTHAGVASAPMSPEPVHIEPFKPGPLVMGVDILPAGPPKDASAAASAAAAAEQADDNQEPFDPPMLRRRGSSFRLGREQNPNETDEATKIKDQEKREQEMLREERRLTSDKEQNMKRISMMARAMTSDYDDY* # ORIGINAL: g13556.t1 original gene structure, not modified by PASA NODE_1882_length_8739_cov_39.598 AUGUSTUS gene 566 3176 . - . ID=g13556;Name=g13556.t1 NODE_1882_length_8739_cov_39.598 AUGUSTUS mRNA 566 3176 . - . ID=g13556.t1;Parent=g13556;Name=g13556.t1 NODE_1882_length_8739_cov_39.598 AUGUSTUS exon 2615 3176 . - . ID=g13556.t1.exon1;Parent=g13556.t1 NODE_1882_length_8739_cov_39.598 AUGUSTUS CDS 2615 3176 . - 0 ID=cds.g13556.t1;Parent=g13556.t1 NODE_1882_length_8739_cov_39.598 AUGUSTUS exon 566 2514 . - . ID=g13556.t1.exon2;Parent=g13556.t1 NODE_1882_length_8739_cov_39.598 AUGUSTUS CDS 566 2514 . - 2 ID=cds.g13556.t1;Parent=g13556.t1 #PROT g13556.t1 g13556 MSARPNRKTAGADSQQPWLQRVHPQTPRQSLPALLPAVIAIVACAAAYCWVVRSATPAVVTPFPGARVAECEDCFPDGHARRLLWGTYRPQVYLGVRARVPRSPVAGLMWFDNAQRDPFGTMRHTCEHSHGLRSYGWQRHDGSTFGRQTINDTHMDLTTDFVKREEGASDWALRVLGVRRAGAQDTEGPVKGGEYANVFLYLGDEGGSALAVDSLADGRIRVRGRSAAVGAFEFEITAVRSARHATNFAALHTRHTHNLTAAVSRALMDAYRSKGQPVLPDGPMTGDAPHASVVVVQMQVQIPFEIEARYVSLDAAHGGGQGTLEDRRAALEGNTLIAAIESRMAQFDERFERTFGLRGRAYSGADIAAARAALSNLVGGMGYFYGHSLVKDSAGGARQHQQPHQRASPPPHGPPPPLKYFDAPLFTAVPSRPFFPRGFMWDEGFHQLLVVRWDAAIAADALAHWLDLMNSDGWIPREQILGEEARGKVPSEFVVQSSDFANPPTLILPIASLLSTDRAAWTPLVVAALPRLRAWYAWFNASQAGSLPSSFRWRGREGAGERELNAKTLTSGLDDYPRASHPSPDERHVDLRCWMAVFADAMERACTAAGDDSCSSAYERDRQVLSEMSALDRLHWDTVERAYFDHGNHTDRVRLVPSEAGGGLVRRVAGKPRRAFVRHYGYVSLFPLIARLLPADSARLGDVLARIDMPDLLWTAHGLRSLARNSTMYLERNTEHDAPYWRGPVWVNINYLVLGSLRHYADGGGAHAARAGALYRRLRDALVGNVLDEYRRSGYLWEQYDVAAGSEGRGKGTHPFTGWTALVVLAMAEQYPGVGV* # PASA_UPDATE: g13557.t1, single gene model update, valid-1, status:[pasa:asmbl_2899,status:12], valid-1 NODE_1882_length_8739_cov_39.598 . gene 3524 7084 . + . ID=g13557;Name=g13557.t1 NODE_1882_length_8739_cov_39.598 . mRNA 3524 7084 . + . ID=g13557.t1;Parent=g13557;Name=g13557.t1 NODE_1882_length_8739_cov_39.598 . five_prime_UTR 3524 3602 . + . ID=g13557.t1.utr5p1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 3524 3747 . + . ID=g13557.t1.exon1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 3603 3747 . + 0 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 4010 4323 . + . ID=g13557.t1.exon2;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 4010 4323 . + 2 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 4496 4614 . + . ID=g13557.t1.exon3;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 4496 4614 . + 0 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 4935 5071 . + . ID=g13557.t1.exon4;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 4935 5071 . + 1 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 5237 5382 . + . ID=g13557.t1.exon5;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 5237 5382 . + 2 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 5843 5968 . + . ID=g13557.t1.exon6;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 5843 5968 . + 0 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 6222 6392 . + . ID=g13557.t1.exon7;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 6222 6392 . + 0 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . exon 6557 7084 . + . ID=g13557.t1.exon8;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . CDS 6557 6652 . + 0 ID=cds.g13557.t1;Parent=g13557.t1 NODE_1882_length_8739_cov_39.598 . three_prime_UTR 6653 7084 . + . ID=g13557.t1.utr3p1;Parent=g13557.t1 #PROT g13557.t1 g13557 MFSESVVALAVICGAMGFGQWRASGKSHTDFAFVSFRRSFLAVYLMALAADWLQGPYVYALYESYGMSKQQIEQLFVAGFGSSLVFGTVIGSLADTVGRRRICLLYAITYGLSCITKHFNNFNILFFGRILAGVATSILFSAFESWLVCEHNKRGFNGDLLSEVFSLATLGNSLIAIVSGLVANHLAMTVNFVAPFDLSLVVLIVMMCIIAASWEENYGNRAVGFASSFNSALNVVKTDTRVAILGLVQSMFEAAMYMFVLMWTPALAPKDATAEAVPHGNVFAAFMMMVMIGSGVFKLLVARANPESFMIPVFGVAAACLAVPALFSQNQGLVYVCLLAFEGCIGIFWPAIGTMRSKYIPEETRSTVMNIFRVPLNLIVVAVLLQDLTVETVFGLCAGLLVTAASLQGLLLAKVRA* # PASA_UPDATE: g4388.t1, single gene model update, valid-1, status:[pasa:asmbl_6749,status:12], valid-1 NODE_3938_length_2488_cov_42.455 . gene 41 1993 . - . ID=g4388;Name=g4388.t1 NODE_3938_length_2488_cov_42.455 . mRNA 41 1993 . - . ID=g4388.t1;Parent=g4388;Name=g4388.t1 NODE_3938_length_2488_cov_42.455 . five_prime_UTR 1992 1993 . - . ID=g4388.t1.utr5p1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . exon 1797 1993 . - . ID=g4388.t1.exon1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . CDS 1797 1991 . - 0 ID=cds.g4388.t1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . exon 1408 1476 . - . ID=g4388.t1.exon2;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . CDS 1408 1476 . - 0 ID=cds.g4388.t1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . exon 860 1001 . - . ID=g4388.t1.exon3;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . CDS 860 1001 . - 0 ID=cds.g4388.t1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . exon 536 684 . - . ID=g4388.t1.exon4;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . CDS 536 684 . - 2 ID=cds.g4388.t1;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . exon 41 131 . - . ID=g4388.t1.exon5;Parent=g4388.t1 NODE_3938_length_2488_cov_42.455 . CDS 41 131 . - 0 ID=cds.g4388.t1;Parent=g4388.t1;3_prime_partial=true #PROT g4388.t1 g4388 MLRRSFFESATQRDVPLHKQLIKESEFKLAEISAVADECPYCQADLASYCETAAEAMRAGSAMVQDLAASVQSTKALGAGRVIVVNSTRYRNVPAVVLRPPSSSSTAAAAAQRTSKPMLVMALCERKEMPVVPPRGHVPTVSSKCDPPRDPVPPTVLWRAHGPVGYAVVSVDASEVLFISKSRLKAESVDSERPDAASLEILLQQLLRTVEHGMA # ORIGINAL: g4178.t1 original gene structure, not modified by PASA NODE_3462_length_3413_cov_36.4067 AUGUSTUS gene 351 2886 . - . ID=g4178;Name=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS mRNA 351 2886 . - . ID=g4178.t1;Parent=g4178;Name=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 2864 2886 . - . ID=g4178.t1.exon1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 2864 2886 . - 0 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 2452 2558 . - . ID=g4178.t1.exon2;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 2452 2558 . - 1 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 2037 2123 . - . ID=g4178.t1.exon3;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 2037 2123 . - 2 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 1491 1604 . - . ID=g4178.t1.exon4;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 1491 1604 . - 2 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 1062 1108 . - . ID=g4178.t1.exon5;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 1062 1108 . - 2 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 723 786 . - . ID=g4178.t1.exon6;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 723 786 . - 0 ID=cds.g4178.t1;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS exon 351 439 . - . ID=g4178.t1.exon7;Parent=g4178.t1 NODE_3462_length_3413_cov_36.4067 AUGUSTUS CDS 351 439 . - 2 ID=cds.g4178.t1;Parent=g4178.t1 #PROT g4178.t1 g4178 MQGDEMTRIIWDLIKAKLIFPFVELNIKFFDLGIEHRDATNDTVTVDAANAIMKYHVGIKCATITPDEARVKEFNLKQMWKSPNGTIRNILGGTIFREPIVCSNVPRLVPGWTKPIVIGRHAHGDQYRATDFVVDGPGKFEVSFTPAGKPSSEAKKFTVFDFKDGGGIALSMYNTDA # PASA_UPDATE: g8339.t1, single gene model update, valid-1, status:[pasa:asmbl_9370,status:3], valid-1 NODE_787_length_17700_cov_54.4354 . gene 4179 10646 . - . ID=g8339;Name=g8339.t1 NODE_787_length_17700_cov_54.4354 . mRNA 4179 10646 . - . ID=g8339.t1;Parent=g8339;Name=g8339.t1 NODE_787_length_17700_cov_54.4354 . five_prime_UTR 10447 10646 . - . ID=g8339.t1.utr5p1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 10383 10646 . - . ID=g8339.t1.exon1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 10383 10446 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 9893 10123 . - . ID=g8339.t1.exon2;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 9893 10123 . - 2 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 9621 9694 . - . ID=g8339.t1.exon3;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 9621 9694 . - 2 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 9169 9322 . - . ID=g8339.t1.exon4;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 9169 9322 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 8616 8776 . - . ID=g8339.t1.exon5;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 8616 8776 . - 2 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 8239 8331 . - . ID=g8339.t1.exon6;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 8239 8331 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 7685 7861 . - . ID=g8339.t1.exon7;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 7685 7861 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 7257 7381 . - . ID=g8339.t1.exon8;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 7257 7381 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 6574 6901 . - . ID=g8339.t1.exon9;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 6574 6901 . - 1 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 4582 6342 . - . ID=g8339.t1.exon10;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 4582 6342 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . exon 4179 4424 . - . ID=g8339.t1.exon11;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . CDS 4287 4424 . - 0 ID=cds.g8339.t1;Parent=g8339.t1 NODE_787_length_17700_cov_54.4354 . three_prime_UTR 4179 4286 . - . ID=g8339.t1.utr3p1;Parent=g8339.t1 #PROT g8339.t1 g8339 MAGLRILLLAVAALATLSIFNVVAGAGDCTTKRTCRECLNDKTMPECGWCGSFGGCLPKSSSASCPPASWLYKTSTILSNKTSSDEVTPTSLSVFLRQGEELKVRVKVTPQACKNVDLYLLMDFSGSMGDDLDKVKTLAQSLTAATQGLCNATCNDPQCARIGMGSFVEKPRYPAGYWSASNYWSEKNVPDNSVFRSRLSLSTNMVDFQNQLSNIPASQITGNNDWAEDPFEAMMQVLKCRKLTNWASRDVSQKQPRRIILVLTDADYHLRGEGGALGLNEPNPGACYVDESDLSNTDIVNSQIDAASLLYDYPTLTQIRNALIETNTVPIFAVVPGRPAISSSDNEKAYGNIRDALGFGYFTTLSADSDNIIEVLKQSYASIASKLSMAVAQNGNQVLVRSVSPDTDTGYTGVKAGSNYTFDVTLYDDGSLGDAKNVLVKLSILGFGNIEINITRTIDCTANCATYCTVNGNSKCGNVTRGACECGRCDCAAGFKGDTCQCDSKTQCTVVNGAECNGQGSCECGACACRSPFTGANCTCFEGPCPTKTAGMVCSGHGACACSSCKCDSGWSLADCSCQTGVAAACGTGEANVCSNHGKCNTCGQCDCDPGFSGSTCQTVVPSCPTNCSGHGNCVGAGQCTCVDNYTGSDCACPPCKASCVEFGTCECGVCTSCIQGRDKTTDCECVDTCDGNPTGILNGKCDCNGGFKCKPGWEGETCSCKTDAKCPGTAQAGMCSGHGTCDTSTCDSTKASPIPGTCICFAGYTHSNNSNPICDCSEAECPGNEKLGQCYGHGTCTCGKCVCNAGYDASTNCLCQSNSTCPMYLGLECGGPDRGECSRSSDSCAKCVCKSEEGRPLFSGTSCNCSTSPCPIDPNTGITCGDNGDCVCGQCKCRLPDKAGSYCQCGLCPRNDTTLADGTFIQGVECSGRGTCDCGVCKCNLGEYSDSPKGACEYCNIAYVNADLVTPNQCPNDTCTAYAGSCDGCMAIPGCYKCADFSGCYNADNRQAKCNGNYFTSSSSCPLLGGLTKTEVAGVFGGVFGGLIAAGAAGIIAYKVVNVMRDKKEWEKFESEKAKSAWKADQNPLYVASTIEHVNPIYND* # ORIGINAL: g8341.t1 original gene structure, not modified by PASA NODE_787_length_17700_cov_54.4354 AUGUSTUS gene 12170 16043 . - . ID=g8341;Name=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS mRNA 12170 16043 . - . ID=g8341.t1;Parent=g8341;Name=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 15969 16043 . - . ID=g8341.t1.exon1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 15969 16043 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 15739 15845 . - . ID=g8341.t1.exon2;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 15739 15845 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 15459 15522 . - . ID=g8341.t1.exon3;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 15459 15522 . - 1 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 15110 15319 . - . ID=g8341.t1.exon4;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 15110 15319 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 14810 14972 . - . ID=g8341.t1.exon5;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 14810 14972 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 14374 14613 . - . ID=g8341.t1.exon6;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 14374 14613 . - 2 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 14139 14203 . - . ID=g8341.t1.exon7;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 14139 14203 . - 2 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 13928 14032 . - . ID=g8341.t1.exon8;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 13928 14032 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 13696 13765 . - . ID=g8341.t1.exon9;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 13696 13765 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 13490 13572 . - . ID=g8341.t1.exon10;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 13490 13572 . - 2 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 13171 13278 . - . ID=g8341.t1.exon11;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 13171 13278 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 12874 12975 . - . ID=g8341.t1.exon12;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 12874 12975 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 12170 12709 . - . ID=g8341.t1.exon13;Parent=g8341.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 12170 12709 . - 0 ID=cds.g8341.t1;Parent=g8341.t1 #PROT g8341.t1 g8341 MASKDRNFREHASLDVELSSAAFHVPGVVASNPEYFKSMFPGRKRNFFIRPVDHRRDIYKGLSQYNEPDYLLDRDLLGVHLERIKKDIKGDDLSDDEINFADIVDLDDEGFQNYLSQDLTGRLVESSAFRAGILLVIIFNSVLIGVQTDATMEVNYKAIFNAIDKAFLTVFVIEILLKWYYGFAEFWRVGWNVFDFIIVAASILGPSVTFLSSGRILRILRVLRAFRTLRSISALSGLQMIVQTVLQSVPDMANIVLLLCILMFIYAVIGVTVFGDKSPEFDSLGAAMLSMFVCITQDGWMEVYRQTSKFYIWYAVALFLSSFVVIGAFIFANLVVAVVVTNLEMAFNEVKKEARMNSRRLKTTKNGGRPMVQTVDTKETMKKMWRHQMPLEVMHFDRISVQKLENYFLVLLAIEENLREYKTVKEQLAEIATEIRDLNMNVLGDEDDDAYFDDSDEEEAPKMAGDVMTQLIQLERKNRIQSRLASSLGDIFDSTAQERQHAPRPGPAAAAATLGGAQGQASSMAPQPSGARLTRVGSISGLANSAGEGVVPSVPSRLMRAASTRSIVMKRAMSQALLRTASQQAMGSMPNIASHSSLAGEGDDGDDDDSSSDSEGADERPPAPDARPTSSMSQRGPSPQVDT* # PASA_UPDATE: novel_model_25_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_9371,status:3], valid-1 NODE_787_length_17700_cov_54.4354 . gene 16776 17527 . - . ID=novel_gene_25_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_787_length_17700_cov_54.4354 . mRNA 16776 17527 . - . ID=novel_model_25_5b6be656;Parent=novel_gene_25_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_787_length_17700_cov_54.4354 . five_prime_UTR 17380 17527 . - . ID=novel_model_25_5b6be656.utr5p1;Parent=novel_model_25_5b6be656 NODE_787_length_17700_cov_54.4354 . five_prime_UTR 17159 17229 . - . ID=novel_model_25_5b6be656.utr5p2;Parent=novel_model_25_5b6be656 NODE_787_length_17700_cov_54.4354 . exon 17380 17527 . - . ID=novel_model_25_5b6be656.exon1;Parent=novel_model_25_5b6be656 NODE_787_length_17700_cov_54.4354 . exon 16776 17229 . - . ID=novel_model_25_5b6be656.exon2;Parent=novel_model_25_5b6be656 NODE_787_length_17700_cov_54.4354 . CDS 16790 17158 . - 0 ID=cds.novel_model_25_5b6be656;Parent=novel_model_25_5b6be656 NODE_787_length_17700_cov_54.4354 . three_prime_UTR 16776 16789 . - . ID=novel_model_25_5b6be656.utr3p1;Parent=novel_model_25_5b6be656 #PROT novel_model_25_5b6be656 novel_gene_25_5b6be656 MRWMRCPWPTLRMRMRKRRCAPGASALSLLLFLLFRPSVSYPHTLALCALRLPSSLASNPIKSGLVHPASLPCDFFFFFPSPSRRSLSVQRYNTVFCVSCIVFFFFLGSLVAASLFQLWSRK* # ORIGINAL: g8340.t1 original gene structure, not modified by PASA NODE_787_length_17700_cov_54.4354 AUGUSTUS gene 11248 11604 . + . ID=g8340;Name=g8340.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS mRNA 11248 11604 . + . ID=g8340.t1;Parent=g8340;Name=g8340.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 11248 11604 . + . ID=g8340.t1.exon1;Parent=g8340.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 11248 11604 . + 0 ID=cds.g8340.t1;Parent=g8340.t1 #PROT g8340.t1 g8340 MAIPTVAIIVIGACGSFCMLLAFALLNFNRNLGSFGLDETNWKYHALNAVGGALASSSAILTNEAGSYPLAVLEGAWCIIGVVGLVRIWRERWSAKVLLITPASYGSVQGHSCASVPA* # ORIGINAL: g8338.t1 original gene structure, not modified by PASA NODE_787_length_17700_cov_54.4354 AUGUSTUS gene 1162 3869 . - . ID=g8338;Name=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS mRNA 1162 3869 . - . ID=g8338.t1;Parent=g8338;Name=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 3612 3869 . - . ID=g8338.t1.exon1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 3612 3869 . - 0 ID=cds.g8338.t1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 3323 3451 . - . ID=g8338.t1.exon2;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 3323 3451 . - 0 ID=cds.g8338.t1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 2791 3196 . - . ID=g8338.t1.exon3;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 2791 3196 . - 0 ID=cds.g8338.t1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 2224 2502 . - . ID=g8338.t1.exon4;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 2224 2502 . - 2 ID=cds.g8338.t1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 1891 1919 . - . ID=g8338.t1.exon5;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 1891 1919 . - 2 ID=cds.g8338.t1;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS exon 1162 1686 . - . ID=g8338.t1.exon6;Parent=g8338.t1 NODE_787_length_17700_cov_54.4354 AUGUSTUS CDS 1162 1686 . - 0 ID=cds.g8338.t1;Parent=g8338.t1 #PROT g8338.t1 g8338 MGRSTRVAPAPPVPPQTHEQHHESRGVSSGKDSGVNIKSTVDAVDAEPAIILADVDAPHDVSVDLGAAGPRVNPWENLTPRWTLYEILKTVFGVAVLVPVRLVLIFLLVAMWALCARVSILGVPRKLLQEQPLSQKRRRMILSLRIFPRLIFATIGFSLHEERVDDDGTVLARGAESFPAADDVPPFIVGNHPSIFEPLYLFFRCMPSVVAKAETLNYPMLWSVLGGCQALFVDRADKGSRKKVLDALAKRGHTGQFPPTLIFPEGTTCNGTCLVQFKPGAFVAGAPVLPIIFRFQFHRYDPSWTTQSLPGLLVRTLCQFRTMMRVQVMGAHVPTEAEKTDAALFASNVRDRMARVMGVPVTRHSYEDVFLINEARRAHVKQDFAVADFKIMFGIDESAVKTLVRRFRIIDENGDGRIGFYELRKLLDIDSHNARALQHLETLFEILDADERGDIDFYSFVTALSLSGVVEAVAGVHSPQTLDQSHGDVPMSRGFALEAMAALAEKRRRTLKEADFAPHSTVGTVDPLALPIDKLRMWADD* # PASA_UPDATE: g8337.t1, single gene model update, valid-1, status:[pasa:asmbl_9372,status:12],[pasa:asmbl_9373,status:12], valid-1 NODE_787_length_17700_cov_54.4354 . gene 37 959 . + . ID=g8337;Name=g8337.t1 NODE_787_length_17700_cov_54.4354 . mRNA 37 959 . + . ID=g8337.t1;Parent=g8337;Name=g8337.t1 NODE_787_length_17700_cov_54.4354 . five_prime_UTR 37 38 . + . ID=g8337.t1.utr5p1;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . exon 37 114 . + . ID=g8337.t1.exon1;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . CDS 39 114 . + 0 ID=cds.g8337.t1;Parent=g8337.t1;5_prime_partial=true NODE_787_length_17700_cov_54.4354 . exon 300 331 . + . ID=g8337.t1.exon2;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . CDS 300 331 . + 2 ID=cds.g8337.t1;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . exon 542 959 . + . ID=g8337.t1.exon3;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . CDS 542 679 . + 0 ID=cds.g8337.t1;Parent=g8337.t1 NODE_787_length_17700_cov_54.4354 . three_prime_UTR 680 959 . + . ID=g8337.t1.utr3p1;Parent=g8337.t1 #PROT g8337.t1 g8337 WVTLGTFHFPASEDVPNSLLSSGNMILSIKPANYFDESPVAESQNSILLNPGTVVYDGISGKACAVKPVPIDYDGTTAVTE* # PASA_UPDATE: g3706.t1, single gene model update, valid-1, status:[pasa:asmbl_4397,status:12],[pasa:asmbl_4398,status:12],[pasa:asmbl_4399,status:12], valid-1 NODE_2479_length_6117_cov_31.1859 . gene 124 6045 . - . ID=g3706;Name=g3706.t1 NODE_2479_length_6117_cov_31.1859 . mRNA 124 6045 . - . ID=g3706.t1;Parent=g3706;Name=g3706.t1 NODE_2479_length_6117_cov_31.1859 . five_prime_UTR 6044 6045 . - . ID=g3706.t1.utr5p1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 5858 6045 . - . ID=g3706.t1.exon1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 5858 6043 . - 0 ID=cds.g3706.t1;Parent=g3706.t1;5_prime_partial=true NODE_2479_length_6117_cov_31.1859 . exon 4931 5617 . - . ID=g3706.t1.exon2;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 4931 5617 . - 0 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 3746 4427 . - . ID=g3706.t1.exon3;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 3746 4427 . - 0 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 2447 3592 . - . ID=g3706.t1.exon4;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 2447 3592 . - 2 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 1961 2289 . - . ID=g3706.t1.exon5;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 1961 2289 . - 2 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 1242 1720 . - . ID=g3706.t1.exon6;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 1242 1720 . - 0 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 890 1020 . - . ID=g3706.t1.exon7;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 890 1020 . - 1 ID=cds.g3706.t1;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . exon 124 311 . - . ID=g3706.t1.exon8;Parent=g3706.t1 NODE_2479_length_6117_cov_31.1859 . CDS 124 311 . - 2 ID=cds.g3706.t1;Parent=g3706.t1;3_prime_partial=true #PROT g3706.t1 g3706 LDRLYSLEHLDVSDNCLDSFTDAAKLGRLPLLSTLRLSGNPVAFHNKYRVLVLTQFSERLDEFVLDGAIATPKERKAVAMAAPLEQAVSPAMSPVPTQPAHRAATAARGAPVDSTTSSSNNNKSNSSSNNNNNISGITATNNSNSISTSTPQGLSQSQPSAQTPVTSSASAPRRLSAQATSLPAAVPGTPSTPVMEAMDISTASLMSVATHPSILMPNSSSRVGGGSGGVNTSAHVTPVGALRSKDGGVDGTTEDASFTSAAGSGAVETPRVTALRSGKSGSAKKPGKRRKAKEAIIHDESTFTVGNDDRSPQPVMIARQQPQPHDQRHQEAKGDQQSSLQLQQQQEQQLQQPPTDTPTIDVTLSPNVEPIQFASADPSSDEDILRAPLQRQSGQLLLSPVRDEKKGRCDSTAEFQQRVLAMREEGGNSWLMILNGLEESRAQLHHTGGMTSPPSGQPAQQSGMSPQSTPKKKGHARQQSLATTSSLSGSGTNKPFDRRRSGSLLGADKLAASFDPFTATASENGSLYATPTARSPGSSTDNLDRDDSSQPNLRQSAPPSAWGTVARAVVGGGERRKKNALRPKSMPASAFEGMLLGDADANTTTSPFDAPHGFSTPNASVHGMGGSGAASPSSTRSPAGQRRGMHAQEPRSRAGACTTGLVETLSSSPVALSTSESVGSAVNALPRQRSSFGDNGSASSVGSDGLYATAASPSSLPPVREPTHEFFADALVAGGNRATRILTVGNNAVVESDVATGRVIHSYDTRVLVEINDVFLASSSSTSGAVSFSEGLQGQSAAAALAGAGGGSAGAAGAVGGKASGMEVANKDKPIVRMTFRYSRQDVQVAEYALEDRQSRAELFELLRPLVAVNKARLVMHGRVTCLACSHSFIDVERDPRAKKDMTVCPKCNGTFVVEVADARANGATERMPNRTESTSASTGVIDASPSEDVPLSSSAPSGTSAELSGVQQALGVTCTIAELRALVKMDRNATVASFGAALDQPTMIYINLKVIVGDNERIAAHVRCSGIGIERAGDRDKERPYLAVLSNKTLYVFHEKRSPGQSLEDVLKSQPQKRLKLAATHRLSELCYVDFGAARHSFRLEFHSGAAHVLLTRDPMTTAEFVGALSASLAELSMDEQISLGAISHQPSPGIFNDIVRDVVAVDIARKRGASAVREEVDWTDFLQSDPTNGGDGDGAESPIKSYHLVHQTVLKTKTSVPRTLITTSQKVYLCDEDYLWTDRLTSSHNGDTDAASSHRANPHFRASADGDISDIVSI # PASA_UPDATE: g9532.t1, single gene model update, valid-1, status:[pasa:asmbl_6079,status:12], valid-1 NODE_3450_length_3436_cov_39.931 . gene 2489 3166 . - . ID=g9532;Name=g9532.t1 NODE_3450_length_3436_cov_39.931 . mRNA 2489 3166 . - . ID=g9532.t1;Parent=g9532;Name=g9532.t1 NODE_3450_length_3436_cov_39.931 . five_prime_UTR 3142 3166 . - . ID=g9532.t1.utr5p1;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . exon 3049 3166 . - . ID=g9532.t1.exon1;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . CDS 3049 3141 . - 0 ID=cds.g9532.t1;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . exon 2775 2901 . - . ID=g9532.t1.exon2;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . CDS 2775 2901 . - 0 ID=cds.g9532.t1;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . exon 2489 2655 . - . ID=g9532.t1.exon3;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . CDS 2573 2655 . - 2 ID=cds.g9532.t1;Parent=g9532.t1 NODE_3450_length_3436_cov_39.931 . three_prime_UTR 2489 2572 . - . ID=g9532.t1.utr3p1;Parent=g9532.t1 #PROT g9532.t1 g9532 MDDIRDQMDIANEISEAISQPVAMGGMEMDDDELERELEELAQEELDSKLLDVQGVPATSLPAVPTAEPVVPASATRSKPSKARDEEEDEFERLRAEMAS* # PASA_UPDATE: g9531.t1, single gene model update, valid-1, status:[pasa:asmbl_6078,status:3], valid-1 NODE_3450_length_3436_cov_39.931 . gene 122 2425 . + . ID=g9531;Name=g9531.t1 NODE_3450_length_3436_cov_39.931 . mRNA 122 2425 . + . ID=g9531.t1;Parent=g9531;Name=g9531.t1 NODE_3450_length_3436_cov_39.931 . five_prime_UTR 122 239 . + . ID=g9531.t1.utr5p1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 122 294 . + . ID=g9531.t1.exon1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 240 294 . + 0 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 519 671 . + . ID=g9531.t1.exon2;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 519 671 . + 2 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 913 1019 . + . ID=g9531.t1.exon3;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 913 1019 . + 2 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 1202 1282 . + . ID=g9531.t1.exon4;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 1202 1282 . + 0 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 1439 1627 . + . ID=g9531.t1.exon5;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 1439 1627 . + 0 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 1753 1797 . + . ID=g9531.t1.exon6;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 1753 1797 . + 0 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . exon 1979 2425 . + . ID=g9531.t1.exon7;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . CDS 1979 2176 . + 0 ID=cds.g9531.t1;Parent=g9531.t1 NODE_3450_length_3436_cov_39.931 . three_prime_UTR 2177 2425 . + . ID=g9531.t1.utr3p1;Parent=g9531.t1 #PROT g9531.t1 g9531 MAGKEDVILDPELELAFRRPFDETAQSKLRLSNPSDKAMYFKVKTTAPKRYCVRPNAGKVDRNSSVDVTVFLPKADDLGNDLKCKDKFLVQCVFSSDDNADQETLWKNAATSAPSSIREHKLKCAFLPPVGEGLSESAASPASPAPSSSAPLSVNVQGPVVSPVSSATVAHAHTKDEAAPTRQSVRFEDDSPAAKAVSETKEKEATKSSASAAPKSELRQRVPSQASTAQPSSSHSVAAGDRLAMSHSSQTDARFTALHVVIAFLLGFVLGRFVL* # ORIGINAL: g7212.t1 original gene structure, not modified by PASA NODE_3452_length_3433_cov_41.0831 AUGUSTUS gene 243 2159 . - . ID=g7212;Name=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS mRNA 243 2159 . - . ID=g7212.t1;Parent=g7212;Name=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS exon 1984 2159 . - . ID=g7212.t1.exon1;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS CDS 1984 2159 . - 0 ID=cds.g7212.t1;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS exon 1763 1873 . - . ID=g7212.t1.exon2;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS CDS 1763 1873 . - 1 ID=cds.g7212.t1;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS exon 1149 1594 . - . ID=g7212.t1.exon3;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS CDS 1149 1594 . - 1 ID=cds.g7212.t1;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS exon 807 941 . - . ID=g7212.t1.exon4;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS CDS 807 941 . - 2 ID=cds.g7212.t1;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS exon 243 453 . - . ID=g7212.t1.exon5;Parent=g7212.t1 NODE_3452_length_3433_cov_41.0831 AUGUSTUS CDS 243 453 . - 2 ID=cds.g7212.t1;Parent=g7212.t1 #PROT g7212.t1 g7212 MASPHKGERTMAESMGHRVSFTGFRQIGRADPGLAVLNPYLPDAEEDAERERHFNAIQKLIISQTPSDLRLKILQRTPEEWGLRVKRVAHMPMAQWFDPLSLMSTIVNIFVTICIGERTDTRPLYALVDQVETMREDLGIFSVKQTPPSGITSAAERPKLSLAEAFTGPASSSPPSIARVMSGSASSPLSSSRGQEKTPWHTYELPEDKSEFFLDFTADTGDGWNPTFTVASALAQPQLKVALRGAEEEGGSSYMYLERGKVLVLGGDLCYPDPSPRNYQARFVEPFKHALWSERELKSFFDHPDVPDPSYPHAYAIPGNHDWLDGLVAFRRLICAGTRLGGWVLPQRHSYFALKLPDG # PASA_UPDATE: g2777.t1, single gene model update, valid-1, status:[pasa:asmbl_7564,status:12], valid-1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . gene 159 1049 . + . ID=g2777;Name=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . mRNA 159 1049 . + . ID=g2777.t1;Parent=g2777;Name=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . five_prime_UTR 159 193 . + . ID=g2777.t1.utr5p1;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . exon 159 239 . + . ID=g2777.t1.exon1;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . CDS 194 239 . + 0 ID=cds.g2777.t1;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . exon 395 539 . + . ID=g2777.t1.exon2;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . CDS 395 539 . + 2 ID=cds.g2777.t1;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . exon 914 1049 . + . ID=g2777.t1.exon3;Parent=g2777.t1 NODE_4723_length_1296_cov_36.0393_potentialcontaminant . CDS 914 1049 . + 1 ID=cds.g2777.t1;Parent=g2777.t1 #PROT g2777.t1 g2777 MASSAGMRHRKDVDGDAKRSPSRKAEAKSEPPAPSLRDKVIEGESSDPDALAKRLFRERAESMKLELATQLDMKLHEFINEVDSLYGVAQKLQPTAKHNGYVCMCALL* # ORIGINAL: g13065.t1 original gene structure, not modified by PASA NODE_3728_length_2878_cov_43.4317 AUGUSTUS gene 79 1606 . - . ID=g13065;Name=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS mRNA 79 1606 . - . ID=g13065.t1;Parent=g13065;Name=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS exon 1487 1606 . - . ID=g13065.t1.exon1;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS CDS 1487 1606 . - 0 ID=cds.g13065.t1;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS exon 1004 1224 . - . ID=g13065.t1.exon2;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS CDS 1004 1224 . - 0 ID=cds.g13065.t1;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS exon 458 770 . - . ID=g13065.t1.exon3;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS CDS 458 770 . - 1 ID=cds.g13065.t1;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS exon 79 277 . - . ID=g13065.t1.exon4;Parent=g13065.t1 NODE_3728_length_2878_cov_43.4317 AUGUSTUS CDS 79 277 . - 0 ID=cds.g13065.t1;Parent=g13065.t1 #PROT g13065.t1 g13065 MKFGKVLRSQTYEAWRDKYVCYHKLKRTLKKLQTYRLEKQAELAGHDGTQHLIEAIPDGGHPGDVPLAVRAIQTALENDPQWAEIRKSVRTDLFAALEVGWVQGLGDAIDGLHIIESMTATEDIESCAESTAVSVTITVSALALATAISEDGVAQHKALQKGSTLPRVSMAQLQRARKEDDMRQIVEVYEELQALESYRLLNFQALRKIVKKLDKLSGTSELPAFLVRLETMGFYVDGAMQLAKMLAVAEELHRAIDTDGCLRRKTTEARVKRQKKTNGVHGHK # PASA_UPDATE: g4397.t1, single gene model update, valid-1, status:[pasa:asmbl_4289,status:12],[pasa:asmbl_4291,status:12], valid-1 NODE_2429_length_6315_cov_38.5071 . gene 3669 4989 . - . ID=g4397;Name=g4397.t1 NODE_2429_length_6315_cov_38.5071 . mRNA 3669 4989 . - . ID=g4397.t1;Parent=g4397;Name=g4397.t1 NODE_2429_length_6315_cov_38.5071 . five_prime_UTR 4940 4989 . - . ID=g4397.t1.utr5p1;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . exon 4481 4989 . - . ID=g4397.t1.exon1;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . CDS 4481 4939 . - 0 ID=cds.g4397.t1;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . exon 4205 4301 . - . ID=g4397.t1.exon2;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . CDS 4205 4301 . - 0 ID=cds.g4397.t1;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . exon 3669 4054 . - . ID=g4397.t1.exon3;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . CDS 3720 4054 . - 2 ID=cds.g4397.t1;Parent=g4397.t1 NODE_2429_length_6315_cov_38.5071 . three_prime_UTR 3669 3719 . - . ID=g4397.t1.utr3p1;Parent=g4397.t1 #PROT g4397.t1 g4397 MTIMSGPRALLPPPRFGPPPPQSLPYSHPNAHSGTRGPHPPFHPQGFGPSPRGAPRPPFPNNGGNPYGGGGFGPPAYAHHPHAHSAPRHGMQPPPHSFQPPPYSYANRGMGSGGLGGRGRGGGRGGGRGGFQHGHGFGGDGGGGGFANQQHFQANKRRRLDEPSTGHTRASYNASFTEDPWHRLLTESERVQLGPLLSTTTHTSMPGPPVRTVIGCGGDGGSDRDVSSPSAGDGPDEGVRLHDDEGSDDGGADGINSPKDDCDGEDACCPHDGEIVGAATVESSTDRLQTPSDFLS* # PASA_UPDATE: g4398.t1, single gene model update, valid-1, status:[pasa:asmbl_4290,status:12], valid-1 NODE_2429_length_6315_cov_38.5071 . gene 5488 6090 . - . ID=g4398;Name=g4398.t1 NODE_2429_length_6315_cov_38.5071 . mRNA 5488 6090 . - . ID=g4398.t1;Parent=g4398;Name=g4398.t1 NODE_2429_length_6315_cov_38.5071 . five_prime_UTR 6040 6090 . - . ID=g4398.t1.utr5p1;Parent=g4398.t1 NODE_2429_length_6315_cov_38.5071 . exon 5944 6090 . - . ID=g4398.t1.exon1;Parent=g4398.t1 NODE_2429_length_6315_cov_38.5071 . CDS 5944 6039 . - 0 ID=cds.g4398.t1;Parent=g4398.t1 NODE_2429_length_6315_cov_38.5071 . exon 5488 5811 . - . ID=g4398.t1.exon2;Parent=g4398.t1 NODE_2429_length_6315_cov_38.5071 . CDS 5599 5811 . - 0 ID=cds.g4398.t1;Parent=g4398.t1 NODE_2429_length_6315_cov_38.5071 . three_prime_UTR 5488 5598 . - . ID=g4398.t1.utr3p1;Parent=g4398.t1 #PROT g4398.t1 g4398 MPTENLMKGTVTAGVYNVSVSFPMWAMSGLWQLFHVFLSDDAGNTVTYDSRALVELGFPMNIHVSNVNLTYGGEDLFDYEEKLYDPYMLEEETEEDEEYYAY* # PASA_UPDATE: g4396.t1, single gene model update, valid-1, status:[pasa:asmbl_4288,status:12], valid-1 NODE_2429_length_6315_cov_38.5071 . gene 1924 3498 . + . ID=g4396;Name=g4396.t1 NODE_2429_length_6315_cov_38.5071 . mRNA 1924 3498 . + . ID=g4396.t1;Parent=g4396;Name=g4396.t1 NODE_2429_length_6315_cov_38.5071 . five_prime_UTR 1924 1950 . + . ID=g4396.t1.utr5p1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . exon 1924 1977 . + . ID=g4396.t1.exon1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . CDS 1951 1977 . + 0 ID=cds.g4396.t1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . exon 2200 2290 . + . ID=g4396.t1.exon2;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . CDS 2200 2290 . + 0 ID=cds.g4396.t1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . exon 2380 2552 . + . ID=g4396.t1.exon3;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . CDS 2380 2552 . + 2 ID=cds.g4396.t1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . exon 2670 2818 . + . ID=g4396.t1.exon4;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . CDS 2670 2818 . + 0 ID=cds.g4396.t1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . exon 2966 3498 . + . ID=g4396.t1.exon5;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . CDS 2966 3464 . + 1 ID=cds.g4396.t1;Parent=g4396.t1 NODE_2429_length_6315_cov_38.5071 . three_prime_UTR 3465 3498 . + . ID=g4396.t1.utr3p1;Parent=g4396.t1 #PROT g4396.t1 g4396 MASATHANYEGLLLELRKCASTVEGFFANVVYPDLIHSRDDSPEVVDLAKELTDLKSELLKYKSLKLSPQDAESIAVAADVPHTSEHALASLRYDEKISNYSTSVVKSFAAHMRDFFPGLAAHTPANNLSEKRHISVEDALSAILGRLPTNAPTAKVVRIRGSGIYADNAVAVVFTVGTVLRARFALQPRDVSLSEPIVFSSATVCAYAEERNDMSDCEWPRSKHAVFRRISDHFNSVLQRTSKGSADGSVHARGHLREIVYLVASYADLFSAPCVACRSLLVADRECGLLPPIVRGADGAMGPLHPDCRWR* # ORIGINAL: g4395.t1 original gene structure, not modified by PASA NODE_2429_length_6315_cov_38.5071 AUGUSTUS gene 146 328 . + . ID=g4395;Name=g4395.t1 NODE_2429_length_6315_cov_38.5071 AUGUSTUS mRNA 146 328 . + . ID=g4395.t1;Parent=g4395;Name=g4395.t1 NODE_2429_length_6315_cov_38.5071 AUGUSTUS exon 146 328 . + . ID=g4395.t1.exon1;Parent=g4395.t1 NODE_2429_length_6315_cov_38.5071 AUGUSTUS CDS 146 328 . + 0 ID=cds.g4395.t1;Parent=g4395.t1 #PROT g4395.t1 g4395 VHDFQTHHRLTEASDRDMAETLNDRVQAWSMGQAVFLVAISVGQVLFLRRLFDDHNRRYA* # ORIGINAL: g13378.t1 original gene structure, not modified by PASA NODE_4803_length_1237_cov_29.012 AUGUSTUS gene 77 833 . + . ID=g13378;Name=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS mRNA 77 833 . + . ID=g13378.t1;Parent=g13378;Name=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS exon 77 224 . + . ID=g13378.t1.exon1;Parent=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS CDS 77 224 . + 1 ID=cds.g13378.t1;Parent=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS exon 344 506 . + . ID=g13378.t1.exon2;Parent=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS CDS 344 506 . + 0 ID=cds.g13378.t1;Parent=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS exon 739 833 . + . ID=g13378.t1.exon3;Parent=g13378.t1 NODE_4803_length_1237_cov_29.012 AUGUSTUS CDS 739 833 . + 2 ID=cds.g13378.t1;Parent=g13378.t1 #PROT g13378.t1 g13378 ILTSIRDTCIDLLGQDTSRNDPAFKGEKDGKFTFQPQIPQRGAPPSHTQLYLVRTMLESCFNEKAIANRKTTFGDKDFSSRLIKEMESFFRKSFYYPLLMNFEQTIYDCTDLSQLWYREFFLELTMGARIQVRT* # PASA_UPDATE: g6812.t1, single gene model update, valid-1, status:[pasa:asmbl_7568,status:12], valid-1 NODE_4730_length_1292_cov_52.456 . gene 1 1232 . - . ID=g6812;Name=g6812.t1 NODE_4730_length_1292_cov_52.456 . mRNA 1 1232 . - . ID=g6812.t1;Parent=g6812;Name=g6812.t1 NODE_4730_length_1292_cov_52.456 . five_prime_UTR 1227 1232 . - . ID=g6812.t1.utr5p1;Parent=g6812.t1 NODE_4730_length_1292_cov_52.456 . exon 811 1232 . - . ID=g6812.t1.exon1;Parent=g6812.t1 NODE_4730_length_1292_cov_52.456 . CDS 811 1226 . - 0 ID=cds.g6812.t1;Parent=g6812.t1 NODE_4730_length_1292_cov_52.456 . exon 1 72 . - . ID=g6812.t1.exon2;Parent=g6812.t1 NODE_4730_length_1292_cov_52.456 . CDS 1 72 . - 1 ID=cds.g6812.t1;Parent=g6812.t1;3_prime_partial=true #PROT g6812.t1 g6812 MGGPAVPSSWVGGIPGVTYRLGGQLTGDVAIRVVVSSNFTVAPIANVCGSIRGSVEPDRVVIMGNHRDAWVYGGADPSSGTAAMMEAVRVFGELRKGGWQPRRTLTMCSWDAEEFGLIGSSEYCEDYAHVLSTDAVAYLNIDIAVEGTLSLSAKAAPILRDV # ORIGINAL: g6331.t1 original gene structure, not modified by PASA NODE_1954_length_8364_cov_36.1638 AUGUSTUS gene 51 8220 . - . ID=g6331;Name=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS mRNA 51 8220 . - . ID=g6331.t1;Parent=g6331;Name=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 7898 8220 . - . ID=g6331.t1.exon1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 7898 8220 . - 0 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 7202 7631 . - . ID=g6331.t1.exon2;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 7202 7631 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 4110 6880 . - . ID=g6331.t1.exon3;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 4110 6880 . - 0 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 3731 3814 . - . ID=g6331.t1.exon4;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 3731 3814 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 3328 3411 . - . ID=g6331.t1.exon5;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 3328 3411 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 3052 3135 . - . ID=g6331.t1.exon6;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 3052 3135 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 2270 2353 . - . ID=g6331.t1.exon7;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 2270 2353 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 2031 2114 . - . ID=g6331.t1.exon8;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 2031 2114 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 1729 1858 . - . ID=g6331.t1.exon9;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 1729 1858 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 1196 1344 . - . ID=g6331.t1.exon10;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 1196 1344 . - 0 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 783 950 . - . ID=g6331.t1.exon11;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 783 950 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 389 472 . - . ID=g6331.t1.exon12;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 389 472 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS exon 51 134 . - . ID=g6331.t1.exon13;Parent=g6331.t1 NODE_1954_length_8364_cov_36.1638 AUGUSTUS CDS 51 134 . - 1 ID=cds.g6331.t1;Parent=g6331.t1 #PROT g6331.t1 g6331 MQRRNKVYEDMNNEMAMKQMLVRRLKKARDEHEHVPTSTLIRSVQRGQVPISPPPVRPTSRLSTGRPGSSHAYRMDDVSDAADVLDDSNLRQIAAELRTTKGRPKSASSTHTQQRRPASAARKLRPLSAAGTRAPDADKASQPASPATAEPTSPIRHPHQPHKTQLIFPVATVSAKETPPLVPRIDRRPVSSSQHSQHAQATMVHMRFEGIKGRAAHVEILQQPSNMPNVIRVFSGTVAPGQTFAFVSRRVPEGMFGITVNIDGLRHKTISKCCECRQRFGLVLGLFKIVGLENPQPCPKCIAGSNKVGGRTPWMDLIEAAASMREGVDVLATKEKRKARTLAAKRHSPSSIVIPTLDVPSDGPSISIHAPTPIQVGSIGNAFATPPKQSSPHASAENVYDDDFEDGDGDEDGDGGAREDEDDGDERDKKDDEGGSEGERDGSDNGGDYNDDAEEHDGDGGGDTSMRRDDDGDGNDDRGHSEDGGEGSDGNYSHHRHAGVSGNRGGREACADRPDSQMSNTTTQSEDHETTLERHQLEEQGRLLQSLLEQQRRDMERLESARDAKNKTKKKQTTPPSSHAGAHHDNPSALEASPASASGNNLAKEDANGANVLQGSGGKRRTSQHKSQPELAKASEGELPKKDKKGALSQSKASSTPSIARLKMTDSVSSDAPTEPDNESSDDNALTNHSQPQRSASHAHDSDVSGHHTSSTDALAAKEENEENSFSDGGRLGDSNEEETSRGGDIHRVASMSAESVKSASSLRNRKGVPLAVLKLSGKPAPPGPMTADAAAASFSAFERPGALARLKGASVLDSALNLLSKNPDMGSLDSLCADDNNDNNDSNDNGDYTSEDKRESPRIQKRATKLAPDSAAVLINEVERSFGQSSQDIVMAVRASADNQAATRRPPASGLVAADVLESAAAIIGVVSSESFEGSPPISNKTRGDSAATVVTSSASTAPIIGDGSDSHAIGTPELQAAMRSGAGRRRGDNAAHSDDADADQNSNGVRSPNSSDYADEDRDKTTSPPNLTARRNTSLTVNVHNGGTESGATTAAPTPLVETNSATAIPHLPHKSEADVDGDSDDDQDRSLGRGMSSSHNTSTSLSVQNVMAAADRGRRVSGFDESALMSSVHGLEIIEQMRRGAEVAFGRRNLKIEEMWVISKELPLNTNIKSLSLNNNSLGEDYAWSLAEGLKGNTSIVELDLHDCDIGNTGIRYLADALEKNRCITMLNLGGNGFGDEATKYLANAIRGNSVLDTLYLADNLIGDEGAQCLAEAVQANPTITTLNLNLNRIGEVGAKHLKKSMRRGSSVAKILLRDNKVDVVLERRESAMSSDSTDEDDENSSKGSQPNLETPAENSESHALASASFRDTIKGKAHINLSTLDVTWDHISDVAAELVERNTVKSVSFLRNEIGDDGAGILAGGLALSNSVESVNLNSNDIGPDGMRQIASALKSNRSIRTLTLNKNPVGDEGAIAIADMLRSNKVLSLLDIGDAHISTNGISAIAAAVKSNIGLKEL # PASA_UPDATE: g13586.t1, single gene model update, valid-1, status:[pasa:asmbl_2413,status:12], valid-1 NODE_1712_length_9572_cov_41.9403 . gene 252 5301 . - . ID=g13586;Name=g13586.t1 NODE_1712_length_9572_cov_41.9403 . mRNA 252 5301 . - . ID=g13586.t1;Parent=g13586;Name=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 5211 5301 . - . ID=g13586.t1.exon1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 5211 5301 . - 0 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 4910 4946 . - . ID=g13586.t1.exon2;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 4910 4946 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 4236 4358 . - . ID=g13586.t1.exon3;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 4236 4358 . - 1 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 4041 4075 . - . ID=g13586.t1.exon4;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 4041 4075 . - 1 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 3608 3709 . - . ID=g13586.t1.exon5;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 3608 3709 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 3224 3361 . - . ID=g13586.t1.exon6;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 3224 3361 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 2399 2796 . - . ID=g13586.t1.exon7;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 2399 2796 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 1479 2178 . - . ID=g13586.t1.exon8;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 1479 2178 . - 0 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 944 1150 . - . ID=g13586.t1.exon9;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 944 1150 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 734 841 . - . ID=g13586.t1.exon10;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 734 841 . - 2 ID=cds.g13586.t1;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . exon 252 300 . - . ID=g13586.t1.exon11;Parent=g13586.t1 NODE_1712_length_9572_cov_41.9403 . CDS 252 300 . - 2 ID=cds.g13586.t1;Parent=g13586.t1;3_prime_partial=true #PROT g13586.t1 g13586 MSTRQSTDPIRNVSALSESGSLPRLRPRSVNARQEGPATVHARGRYGINCTTCPACVNGRCNATRAGNGKCMCDAGWTGALCDTCLPGFYSPSCLRCGCTKGVCLDGIGGTGTCQQPCPVGLIGTYCNITCPPCVLGTCTLDGAGGTASCVCNAAATGASCDQCVRGSYGPTCAGVCACQNGGVCFEGRNGTGSCDCSAVVGFTGASCTTPCESIGKYGPGCAYECQCKNGGQCNPSTGECTCRSGWKGTLCDFIIAPSAPIITSINGSGYEVAIAWMHPEDLTGAPRDWLPWKYAVERLGCPGLIFPVQSDTVLFDRTVSPNDRFVYSVVAINAIGAKSEATSTGLVIVLLKDKPSIPKILAATPTLAANRTLAIQLVWTEDTRSGAIVWTRIYRNSSLLFEGNIINSYVDSDVTRGRAYYYEIDSQNAFGTSSRSASVSATAIDFTGPVTTATVLTPDAPAAQSSTSSGVAAGAAVGAVVVTLALVFVVGYVVWRRKKQKKQRDVIRETDLIEMVVRRPEIIELQVSGTCIRMGRRVGEGEFGEVYKGAVMVGGKTIDPVAIKTFKVSPMATLDEVRSARSQFMREIDLIRSIPPHKNVLTLVAVSLDDPCAMVIDFAEHGDLRHFVIENAKELNVADMLCFSIDIALGMAHLQRVGIIH # ORIGINAL: g12138.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 3335 6195 . + . ID=g12138;Name=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 3335 6195 . + . ID=g12138.t1;Parent=g12138;Name=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 3335 3538 . + . ID=g12138.t1.exon1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 3335 3538 . + 0 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 3837 3899 . + . ID=g12138.t1.exon2;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 3837 3899 . + 0 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 4124 4199 . + . ID=g12138.t1.exon3;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 4124 4199 . + 0 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 4423 4552 . + . ID=g12138.t1.exon4;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 4423 4552 . + 2 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 4909 5013 . + . ID=g12138.t1.exon5;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 4909 5013 . + 1 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 5390 5519 . + . ID=g12138.t1.exon6;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 5390 5519 . + 1 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 5720 5791 . + . ID=g12138.t1.exon7;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 5720 5791 . + 0 ID=cds.g12138.t1;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 6106 6195 . + . ID=g12138.t1.exon8;Parent=g12138.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 6106 6195 . + 0 ID=cds.g12138.t1;Parent=g12138.t1 #PROT g12138.t1 g12138 MDKLKDALARAQSLANRSRAHDAASLHSAIPPSQWSAQPPNARSVEAIEAALAEIKADCDRLWIELQEVHANRIPGSDITKPDVSLDELRFALLKAKEHRHRQELGRVESGAVDVARPSVEVRISLALEETHGTIAELKLARGMLDERITECADEVEREKTALHEHRQVANALRSKIAEMRALPLVPPSESGGQEAELQQKLRRVAESNRTVLSQMGSFLSEYFPPPEDGDGASKKRKKSIRAHLAQPSRDVVPLQEMLEPYVELLIRGGIAVQHPQNARLVRLIEFHH* # ORIGINAL: g12140.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 13747 14211 . - . ID=g12140;Name=g12140.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 13747 14211 . - . ID=g12140.t1;Parent=g12140;Name=g12140.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 13747 14211 . - . ID=g12140.t1.exon1;Parent=g12140.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 13747 14211 . - 0 ID=cds.g12140.t1;Parent=g12140.t1 #PROT g12140.t1 g12140 MERTAPDASCHARRRRVEPTAPGATCTRDAFVKPVGRGRNVMSRALRGRTARVVYTHAVARMVAPVIQSSAASAQPDGLGRTATCAALPTGMAPDVPNSATALTVVLAMLQLAALIARQDGLACTARLHARMVHSEASARARAGATKTVQFAIV* # ORIGINAL: g12139.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 7543 11253 . - . ID=g12139;Name=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 7543 11253 . - . ID=g12139.t1;Parent=g12139;Name=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 10906 11253 . - . ID=g12139.t1.exon1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 10906 11253 . - 0 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 10023 10662 . - . ID=g12139.t1.exon2;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 10023 10662 . - 0 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 9722 9845 . - . ID=g12139.t1.exon3;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 9722 9845 . - 2 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 9554 9588 . - . ID=g12139.t1.exon4;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 9554 9588 . - 1 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 9009 9153 . - . ID=g12139.t1.exon5;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 9009 9153 . - 2 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 8595 8795 . - . ID=g12139.t1.exon6;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 8595 8795 . - 1 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 8066 8187 . - . ID=g12139.t1.exon7;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 8066 8187 . - 1 ID=cds.g12139.t1;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 7543 7937 . - . ID=g12139.t1.exon8;Parent=g12139.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 7543 7937 . - 2 ID=cds.g12139.t1;Parent=g12139.t1 #PROT g12139.t1 g12139 MMRRRVIASNGSCNCTAGWTGASCNVSCAALSPPRFGANCDGACDCANNGVCDRFDGTCNCTTLWSGRNCSDFAIPPAPTANVTKASTKALELTLVGGELEYYVERLGCPAVPIIRKYSYIVTAINPADLKNSTKSVKPTQLEAVVATRKDKPDPPTDVDVVAILIDKVRVIRIRWFDDDSSGPINGTNITRCDGSTNITTAFRLFTDENVVPGKTYWYMIISHNEWGRSEPTISSNITVPDAEKPVTGAVASSSSGNTGAIVGSVIGVLIFVVASVLGGVFIWRRRHKQKREAMVKSELELIDTVVRRPEIAEIEIPGTCIRFRNKIGEGEFGEVYLSDVDFGTSKSTAAVKTFKLSAMSSVDDIRSARSAFMSEIDLMRTVVLEYAQYGDLRHFIVENAKSLDVIDFLVFCLDIARGMEQLAKCQIVHRDLAARNCMVVAPRPTVKNDEAGATLLKMSPKACVIVKVADFGLSRDTGASGDYYVAKNRRKLPVKWIPESLSEQASDVWSYGITMFEVYSRGSKPYVGVENHEVLDYLNSGKRLSKPDGCPQPIYAIMESCWRKYAETRPSFADVVTQLRKVVASYTRTTSVGEGDSGGRRDTDLKRAEKDSRAKAFAIESTENLLSSEHDQEQYAETAPEADHEGADEPDVSNGVYVEQDGPQESSA* # ORIGINAL: g12142.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 19354 19893 . + . ID=g12142;Name=g12142.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 19354 19893 . + . ID=g12142.t1;Parent=g12142;Name=g12142.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 19354 19893 . + . ID=g12142.t1.exon1;Parent=g12142.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 19354 19893 . + 0 ID=cds.g12142.t1;Parent=g12142.t1 #PROT g12142.t1 g12142 MPIVLETGVYPFLLDFFASSPVSFVAANGSHGGVTVKPIADPSLLRRSLPLLQVLLDRSGYSGTIQLNNSFMLVGASGPRASLSLSGITFVTGPQTRTVVVIENAGLNIVDCVFVGRAPDCGVDASDLTCFAPAAIVGSNASYVDIVRSSFVNNVGGYGGAVFVADAPLTIVDCHFKGG* # ORIGINAL: g12137.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 1889 2599 . + . ID=g12137;Name=g12137.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 1889 2599 . + . ID=g12137.t1;Parent=g12137;Name=g12137.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 1889 2599 . + . ID=g12137.t1.exon1;Parent=g12137.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 1889 2599 . + 0 ID=cds.g12137.t1;Parent=g12137.t1 #PROT g12137.t1 g12137 MDDSQNSSRTALLSPHVTQQSTYATEVVVDMQAQGLISPHVSMPSHSSQPPPPVEKVVCTAPSGASFDTNNNSVGGSTESPLPFSNPQRSTMAGRWLPDATYSASSPSTARLDRAEEQNSKPAYCAYDPHSHNLQVQQMAWTLIGFAGTITALLTSVDRDMISERNCLWQVRLGIRLELAGVGILLTSVMSALISMRFLCTGGRLFKTGNALSTFLAGVGGLLVISGFYEAGWCFA* # ORIGINAL: g12141.t1 original gene structure, not modified by PASA NODE_628_length_19976_cov_40.7275 AUGUSTUS gene 16279 17187 . - . ID=g12141;Name=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS mRNA 16279 17187 . - . ID=g12141.t1;Parent=g12141;Name=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 17122 17187 . - . ID=g12141.t1.exon1;Parent=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 17122 17187 . - 0 ID=cds.g12141.t1;Parent=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 16730 16817 . - . ID=g12141.t1.exon2;Parent=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 16730 16817 . - 0 ID=cds.g12141.t1;Parent=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS exon 16279 16520 . - . ID=g12141.t1.exon3;Parent=g12141.t1 NODE_628_length_19976_cov_40.7275 AUGUSTUS CDS 16279 16520 . - 2 ID=cds.g12141.t1;Parent=g12141.t1 #PROT g12141.t1 g12141 MAKDKKTQPKVKGDASADAKTKPVASQLTPLESAVQTASDGGVTVQIRAKPGAQQSRITDVGVDGVGVQIAAPPSDGEANSELISFFASVLGRRKTDVSLKIGSKSRGKVLSVANSTAEEVRLRIAQELAR* # PASA_UPDATE: g914.t1, single gene model update, valid-1, status:[pasa:asmbl_6859,status:12], valid-1 NODE_4013_length_2349_cov_35.102 . gene 99 2349 . - . ID=g914;Name=g914.t1 NODE_4013_length_2349_cov_35.102 . mRNA 99 2349 . - . ID=g914.t1;Parent=g914;Name=g914.t1 NODE_4013_length_2349_cov_35.102 . five_prime_UTR 2349 2349 . - . ID=g914.t1.utr5p1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . exon 2310 2349 . - . ID=g914.t1.exon1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . CDS 2310 2348 . - 0 ID=cds.g914.t1;Parent=g914.t1;5_prime_partial=true NODE_4013_length_2349_cov_35.102 . exon 1596 1826 . - . ID=g914.t1.exon2;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . CDS 1596 1826 . - 0 ID=cds.g914.t1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . exon 1261 1339 . - . ID=g914.t1.exon3;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . CDS 1261 1339 . - 0 ID=cds.g914.t1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . exon 971 1088 . - . ID=g914.t1.exon4;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . CDS 971 1088 . - 2 ID=cds.g914.t1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . exon 99 708 . - . ID=g914.t1.exon5;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . CDS 690 708 . - 1 ID=cds.g914.t1;Parent=g914.t1 NODE_4013_length_2349_cov_35.102 . three_prime_UTR 99 689 . - . ID=g914.t1.utr3p1;Parent=g914.t1 #PROT g914.t1 g914 VEYNAPYMRCCFQCDNVKTLYLDRDIVRQVGRAGVCQPACTHCHFCPTCCDVCGEGIIFHGGNVCSPKQGYSVSYGGHGGGVCCCSNWFLFCGLDNADAMVAVITTQYMASIAKRAAPISMQMPQSTTTVVIQQPVYAQQPMYQGPPQDAPPYDGGNYGPK* # ORIGINAL: g8125.t1 original gene structure, not modified by PASA NODE_371_length_25625_cov_40.2038 AUGUSTUS gene 4068 10425 . + . ID=g8125;Name=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS mRNA 4068 10425 . + . ID=g8125.t1;Parent=g8125;Name=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 4068 4142 . + . ID=g8125.t1.exon1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 4068 4142 . + 0 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 4331 4471 . + . ID=g8125.t1.exon2;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 4331 4471 . + 0 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 4633 4788 . + . ID=g8125.t1.exon3;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 4633 4788 . + 0 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 4989 5232 . + . ID=g8125.t1.exon4;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 4989 5232 . + 0 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 5365 6487 . + . ID=g8125.t1.exon5;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 5365 6487 . + 2 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 6711 6827 . + . ID=g8125.t1.exon6;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 6711 6827 . + 1 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 7049 9926 . + . ID=g8125.t1.exon7;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 7049 9926 . + 1 ID=cds.g8125.t1;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 10081 10425 . + . ID=g8125.t1.exon8;Parent=g8125.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 10081 10425 . + 0 ID=cds.g8125.t1;Parent=g8125.t1 #PROT g8125.t1 g8125 MTKKEKKAGSRLALNIADVPLVSSESDWHAFIFFVDGDNVDDAKELDLLAAAIGTSARPRFQVIGKDLVMAMIKENKGSELSQLCKAQLEDEGELSPDLVARLLKLKLMQLKNEATEAKMAALKAAQAVFAETPLESVGSGIVGSSTDLSKARKKDKGSANPKKRPTTGDDSGEGSAGTTAGGADKKKSKQKKMVSKLAEGVRLIEDEPREGPDYYYFIHGLNLSAALVQAVAEVGIPLDAIVRLDHSDAAIAALQLESAPVRNPLWTDFSRIVDAARHDSSLLDIVVLPATAAPHDPTLPKRDGMPLFDATAGAVYGLVDKRRQHREYVAQMQLIDLPSPRGGVDTSLYRRLVNRVPDQGASVAFILDCLVEQVVYTEDERSGRKSQAENGRRSQAEARSQSDSRAESRQSSLDAYIDALVSDAAAEVPQLRAMYTSLGGEESVDVLRYGDSVSRRMLNLDGDTRALVERAERKMLGMSRAASIVSGWAAEISEKRAAASGKERGVAKQEFLHVCREAKIDNIGEGLVQLATERLLSEAVGITETTALEDRRAAEAFDAFTLVQVVHAASFTRPVVVSRYDDKADKLLVALHGDFQGSRDRSTRTQHESGINCPVGFRNYLRHVHGTPFATPGCHGYNLGDSVIRIRDETVRLHPTDGNQIIVTREVNADGRHSVRTSLWGSDGAVVSAHTDPTIVASERTLSATFSDGAAMSVAVNGSAFYATTEGLLVDVSSEPASVRQTPPNALDTRLSATETARVLRADGSVERYFADGSTETYYADGAVLQRSAEGTTTHTHADGMQEITEGGKGAETVRRTLHLTEATDPHSGDRLVTREDMVSLFTFSDGRVVAEFYDGTRITQMPTGHVRIECRGFAAVEFEPPSAESPSPEPPAESSPQPPEPVVAWLDEQPGRATSAKSTGVAAIEASKLQAESSSAALLGEGGENVDATGSTAGGDDASNGRRSSADVVRPRIRPRGRIIKASDGTVITWSKDGRLDMSRQGGFVLSHDGAGTVALAPNSSSGSAWDGEPGTYTYRLVEGTLVTLDHSGFQFAVAADGQTSMRRPFGPDTTDGQHVGGEGTFDGEMVELQERGTVTADGDNEEGSSTALVVAGADAVLGCIARDGNAPRVFCVADDCTGTELLRDCDLEGYIEALSSSQGASVTCDDAGEHDGFDAVTVVRYVPENGGPGSAAASESADDPSYYFEPLVIPIGLRSYMLRDFVRWDTAPSPRAIELRHVRRRPPMDEAQRALLASQMERYEVWKAERQARAEALLIADMRDSVDIAEAAEISALIAQAMKLRRQASTVSQAPKTPAVRNVADAPEDFAFPASSGQQPALSTGTSKGKKDAKGGGTVGANGKTLRQSKGSNKRPAGGDTAVDASQSGGMDASPEAPRQPLWIDGGTAPPPDVPDLFSLSAALPTLHGEAPTDDPPDENGRPTTPTPSALQNWGVLPKIPSIPATPAAPLTAVSRAPSFRRAVIDRKAPAPPQLGGDITPAQLRTESVVSSARSRPRSMDVDVTGHPRRTAVKIPLAVSSSKGSAASNDRYKQAEEITKRKIATASVAVALGVPRGFEIFPELLDMGHVRAGSRRNFTILLRNVGVDTARFRVKPHRDPALVSITYNSGPVAAGMSVKINVQVEVPNRAGPLIEEFTIDTENEIFTVEIRGVVSVNKGGTGGLLAEASAVEA* # ORIGINAL: g8124.t1 original gene structure, not modified by PASA NODE_371_length_25625_cov_40.2038 AUGUSTUS gene 1810 3200 . - . ID=g8124;Name=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS mRNA 1810 3200 . - . ID=g8124.t1;Parent=g8124;Name=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 3100 3200 . - . ID=g8124.t1.exon1;Parent=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 3100 3200 . - 0 ID=cds.g8124.t1;Parent=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 2141 2918 . - . ID=g8124.t1.exon2;Parent=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 2141 2918 . - 1 ID=cds.g8124.t1;Parent=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 1810 1926 . - . ID=g8124.t1.exon3;Parent=g8124.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 1810 1926 . - 0 ID=cds.g8124.t1;Parent=g8124.t1 #PROT g8124.t1 g8124 MLLVASYDRNHAQAIVTHAGDSTPWTPTPGMNSRKRSRNALAEDDPTEAAIVETERRLEKRLRVSDDHSPTAIVGMCDNAHFLQHSAQLRHQQQQHQQLQQQQPHQQLQQQQRHQQLQQQRQQLHHLQYPALQQLQQQQQQQQQQLQLQQQQLQQPVGDASLNYTMVGHLHRNGVTDDHYHHDSLSYHHDELAQQQLQQQLQQQQRQQQQQQLQQQHHAHSLSPTMGHVDPFESQLEERRRNMEIAYQERMSREVGLIDGASNLSSTPHSEHGAYGDAHTHQHQNHDMYDTPQDMGLGLPTAHEYVNINAILAAAHYARQYHHHGHSQNPH* # PASA_UPDATE: g8128.t1, single gene model update, valid-1, status:[pasa:asmbl_6452,status:12], valid-1 NODE_371_length_25625_cov_40.2038 . gene 21698 25378 . - . ID=g8128;Name=g8128.t1 NODE_371_length_25625_cov_40.2038 . mRNA 21698 25378 . - . ID=g8128.t1;Parent=g8128;Name=g8128.t1 NODE_371_length_25625_cov_40.2038 . five_prime_UTR 25319 25378 . - . ID=g8128.t1.utr5p1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 25128 25378 . - . ID=g8128.t1.exon1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 25128 25318 . - 0 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 24932 24969 . - . ID=g8128.t1.exon2;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 24932 24969 . - 1 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 24703 24792 . - . ID=g8128.t1.exon3;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 24703 24792 . - 2 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 24274 24386 . - . ID=g8128.t1.exon4;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 24274 24386 . - 2 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 23867 24021 . - . ID=g8128.t1.exon5;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 23867 24021 . - 0 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 23643 23712 . - . ID=g8128.t1.exon6;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 23643 23712 . - 1 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 23223 23370 . - . ID=g8128.t1.exon7;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 23223 23370 . - 0 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 22793 22969 . - . ID=g8128.t1.exon8;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 22793 22969 . - 2 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 22395 22442 . - . ID=g8128.t1.exon9;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 22395 22442 . - 2 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . exon 21698 22197 . - . ID=g8128.t1.exon10;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . CDS 21911 22197 . - 2 ID=cds.g8128.t1;Parent=g8128.t1 NODE_371_length_25625_cov_40.2038 . three_prime_UTR 21698 21910 . - . ID=g8128.t1.utr3p1;Parent=g8128.t1 #PROT g8128.t1 g8128 MVTGDNILTAKKISQECGILTPGGVAIEGPVFRALSDKEKTELIPHIQVLARSSPADKFELVRRLKDLGEVVAVTGDGTNDAPALKEADVGFAMGQSGTSIAMNASDIVLLDDNFSSIVKAIRWGRNVFDCIRKFLQFQLSVNMVAILITFIGSISTGVSPLSAVQLLWVNLIMDTLGALALATDDPVEDILLRKPHQRSESLITRNMRHYIYVQVFAQTTILLLVLFVAYPILNIPSSDIKKRDTLVFTTFVFMQIWNEIMARQLTHAIWVFDGLFRNRLFVSILIAICAIQALVVQFGGGFTQTSVLDGYEWLFCQIAAFITVPTVILSRFFLRRYFKNEVGPSSEDDANKIAFVSVNTEDNALSHTDPEPTLAYQKSTKTQKQQMADLTPQEESLRGSASGMSQELSHESSPSLGSPPPYSEAQGKDAGDKHTVD* # ORIGINAL: g8126.t1 original gene structure, not modified by PASA NODE_371_length_25625_cov_40.2038 AUGUSTUS gene 11086 12609 . - . ID=g8126;Name=g8126.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS mRNA 11086 12609 . - . ID=g8126.t1;Parent=g8126;Name=g8126.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 11086 12609 . - . ID=g8126.t1.exon1;Parent=g8126.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 11086 12609 . - 0 ID=cds.g8126.t1;Parent=g8126.t1 #PROT g8126.t1 g8126 MASVHAIKRELRNLVAETNSTVARVPEARHHRRSEASLSPDSSVSVSSDAELAAIADILSGQSVQDFGLHPWWANAPPAYGASFAAPNRFESVSPLSDELSFYATSPSSSEASVDDALIQKIISDDGADVPSFEDVDITIPRVVDAVCAQYESAMDDNKEEMQHMSSDNNDNSMSDGDGDDSDGPADGSRRGRSGPMKTLRDFLQSLTPEEREGMRQEKIDVPMDTHLTKAEERSLKKLRRKVRNKISAQESRRRKKDYVSGLEQRIEMHNTVNVELKTKVRKLEDDNRTLVKELRKLQSLLTPSSSAGKNAVLGTSMSTGVCLMVVLLSFSVFYAPLQGMQTPIGGGSASVSAGSGRVVDGVGASRAVDGGAHMYRVRTLKQIDDSNAATLQSMTDAPLFPPVVAGAVSKSTTTVVASTNSSQSNEAVDGVAVGMEPNADSAAMDVAADVAMGTAAPAVPSSLKESLRTVGRAIANKAAMLVVGRGAHDGRVAVSYNGGSVVALPE* # PASA_UPDATE: g8127.t1, single gene model update, valid-1, status:[pasa:asmbl_6451,status:3], valid-1 NODE_371_length_25625_cov_40.2038 . gene 13916 21253 . + . ID=g8127;Name=g8127.t1 NODE_371_length_25625_cov_40.2038 . mRNA 13916 21253 . + . ID=g8127.t1;Parent=g8127;Name=g8127.t1 NODE_371_length_25625_cov_40.2038 . five_prime_UTR 13916 14009 . + . ID=g8127.t1.utr5p1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 13916 14557 . + . ID=g8127.t1.exon1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 14010 14557 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 14801 15092 . + . ID=g8127.t1.exon2;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 14801 15092 . + 1 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 15429 16876 . + . ID=g8127.t1.exon3;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 15429 16876 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 17136 17244 . + . ID=g8127.t1.exon4;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 17136 17244 . + 1 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 17559 18122 . + . ID=g8127.t1.exon5;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 17559 18122 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 18408 18506 . + . ID=g8127.t1.exon6;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 18408 18506 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 18707 18803 . + . ID=g8127.t1.exon7;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 18707 18803 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 19090 19177 . + . ID=g8127.t1.exon8;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 19090 19177 . + 2 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 19443 19587 . + . ID=g8127.t1.exon9;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 19443 19587 . + 1 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 19726 19888 . + . ID=g8127.t1.exon10;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 19726 19888 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 20194 20277 . + . ID=g8127.t1.exon11;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 20194 20277 . + 2 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 20506 20603 . + . ID=g8127.t1.exon12;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 20506 20603 . + 2 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . exon 20923 21253 . + . ID=g8127.t1.exon13;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . CDS 20923 20946 . + 0 ID=cds.g8127.t1;Parent=g8127.t1 NODE_371_length_25625_cov_40.2038 . three_prime_UTR 20947 21253 . + . ID=g8127.t1.utr3p1;Parent=g8127.t1 #PROT g8127.t1 g8127 MAMHYQMHGAGGAGRRPPVSSGLAQSCARDWYATRRRGCEPRVVLGVMAVVVAVSFLSSAIPLVAAQTRPINIALVGTTSALGKERLANAQLAFAHLNNKTDGWWDDILPNITFNVFQVQNVKCNEASAIAAAETLYRTKAIVAFIGPGCSPGASASDFYLNINTIPHICYSASSTDMSNKAKYPNFFRTVPSNGIDATGLAKVCVAKNWKRVGLLYSVGDVGQGAADTFNIVAALYNITIVVQTSISDTIDQLSAVELIRRADVRIILVMGVGSISIQNVLLYASRVGMTKPGYQWMVTSSFFNSAYFIRNGVIDQGTVDRYLGMLTLKENIRLGSFYDRYIDAWKKADPAVYFDSDGDRNNIDSGPEVYDAVLAYALALNIVVNRGQNETYKSAVITEIKKLSFEGASGPVSFDANLDRLGLPYEIYNYQQKITADNSGFRTVGRIQREVLTMQPDDQVVWYGASPNPAHDGMCPMECNGRGTCRRDDRVCICYTSYSGTDCSLSSPAIATTSQSSTAPCSLPIRYSISGVALNEKISIVVRQNGNGAEVVSPFNLTVIENGHNVSATGAHVSYATDDGSGKLIFSFLGRTDTQFLGLILTAPNLCPSEFALDVTRTTPATSSSKTAAVIGGAVGGGGSTILVAIIVYVLYRRAAREKELASESWKINFDEISISKKGNAISMSHLSLASHGSRGSNSKTSGGGASTGGSNLHLNRGFGGRHVQVGMLNAACVEVHRLKLEQITCTRQLRVEMHDATQKLRNVHLAEFIGICVGPPKTAIVLELNNKGTVEDILDNPAIELDKLFKMSFISDLVEGVHFLHGTSIGYHGWLSTSSIVVNSRWMLKILPCFPRRIAASLYSADTADAQSHDLIWRAPELHKSSPDANDVATAGRSSQVHAATDTTPATYGGGGALAPIETSAGQRGDVYSVGMIMNAIFTREQPFSDGDMSTLETLQAVRKSALRPRMEEKDCEGLADVIRACWSEDPHARPKITDVRAQIRAKNKDSGSGSVVDKMAKMLEAYSKNLEQLVAERTQQLDEEKQKTERLLYRMLPATVAKELIAGRTILAETFEQVTIFFSDIVGFTVIAGQSTPLQIVDLLNHLYTTFDSIIDSSDVYKVETIGDAYMVASGLPLRNGNRHAGEIATMALNLLGSVTHFRIPHMQDAQLQLRIGLHTGEAVAGVVGLKMPRYCLFGDTVNTASRMESSGHALRIHMSSETEKVLRVLGGYTTEYRGEITVKGRVKWRHFG* # ORIGINAL: g8123.t1 original gene structure, not modified by PASA NODE_371_length_25625_cov_40.2038 AUGUSTUS gene 261 1635 . + . ID=g8123;Name=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS mRNA 261 1635 . + . ID=g8123.t1;Parent=g8123;Name=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 261 581 . + . ID=g8123.t1.exon1;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 261 581 . + 0 ID=cds.g8123.t1;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 833 964 . + . ID=g8123.t1.exon2;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 833 964 . + 0 ID=cds.g8123.t1;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 1153 1233 . + . ID=g8123.t1.exon3;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 1153 1233 . + 0 ID=cds.g8123.t1;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS exon 1405 1635 . + . ID=g8123.t1.exon4;Parent=g8123.t1 NODE_371_length_25625_cov_40.2038 AUGUSTUS CDS 1405 1635 . + 0 ID=cds.g8123.t1;Parent=g8123.t1 #PROT g8123.t1 g8123 MKALHFSNFCSSDSGAHANKVKAAISAVAPKRKRVVLVTTGLQPPDRARVESAAAQLGGAACDAVEAEVTTHVIAGRDEHGKTARTLKYLRGVVTGLWIVSIDWVLESVEAGAWLDEEKYEIVHDTLCDGAPRKGRERVAKGLPGLFSGCKVHFRGKFESRKLTKEELIGLVTLGGGQILTREPKLHSVPPAPAPHHASPDNACAHYVMHDPDAAQVVHMTPISSPALCTATAAWLMDCVSHFVIAIPHDIGRT* # PASA_UPDATE: g11281.t1, single gene model update, valid-1, status:[pasa:asmbl_6131,status:12],[pasa:asmbl_6132,status:12], valid-1 NODE_3496_length_3329_cov_39.8925 . gene 133 2218 . + . ID=g11281;Name=g11281.t1 NODE_3496_length_3329_cov_39.8925 . mRNA 133 2218 . + . ID=g11281.t1;Parent=g11281;Name=g11281.t1 NODE_3496_length_3329_cov_39.8925 . five_prime_UTR 133 133 . + . ID=g11281.t1.utr5p1;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . exon 133 295 . + . ID=g11281.t1.exon1;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . CDS 134 295 . + 0 ID=cds.g11281.t1;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . exon 552 1024 . + . ID=g11281.t1.exon2;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . CDS 552 1024 . + 0 ID=cds.g11281.t1;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . exon 1307 2218 . + . ID=g11281.t1.exon3;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . CDS 1307 1658 . + 1 ID=cds.g11281.t1;Parent=g11281.t1 NODE_3496_length_3329_cov_39.8925 . three_prime_UTR 1659 2218 . + . ID=g11281.t1.utr3p1;Parent=g11281.t1 #PROT g11281.t1 g11281 MGDWDKERLMYELGLADEPAPLRTPSSTPNTSNYNSPATTPAIVDGEGEGSPSMRPPRRRSSTKTILKLDSCLLEDDVHGAIAVTETPGGIIVAKQAASSSGSTIVSVNAAGRQVLRLDASLMEDSDDGSAQPPPSHQRNRHPSTGYRDAGGHSSSSREASQQPSLATSTEDVRMNEQPQLRTPARNLVKMDFGGSLVTPEAPKAPASPGLGLKELSHIRRVEALARLDDLEEEAPALCDDVRNGKACLVCLTGGEHSRFTLVKWGWTCGICGFKTCGDCCAKVTVAQETRAFVGLSSGGMSPAQQRRMAITLCNDCRPSVTGHIVLV* # PASA_UPDATE: g13673.t1, single gene model update, valid-1, status:[pasa:asmbl_1176,status:12],[pasa:asmbl_1178,status:12], valid-1 NODE_1312_length_12206_cov_40.9627 . gene 6996 9509 . + . ID=g13673;Name=g13673.t1 NODE_1312_length_12206_cov_40.9627 . mRNA 6996 9509 . + . ID=g13673.t1;Parent=g13673;Name=g13673.t1 NODE_1312_length_12206_cov_40.9627 . five_prime_UTR 6996 7097 . + . ID=g13673.t1.utr5p1;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . exon 6996 7281 . + . ID=g13673.t1.exon1;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . CDS 7098 7281 . + 0 ID=cds.g13673.t1;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . exon 7515 8138 . + . ID=g13673.t1.exon2;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . CDS 7515 8138 . + 2 ID=cds.g13673.t1;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . exon 8366 9509 . + . ID=g13673.t1.exon3;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . CDS 8366 9453 . + 2 ID=cds.g13673.t1;Parent=g13673.t1 NODE_1312_length_12206_cov_40.9627 . three_prime_UTR 9454 9509 . + . ID=g13673.t1.utr3p1;Parent=g13673.t1 #PROT g13673.t1 g13673 MYLARQSALVASVLVACLVLTVSAAVPTFTTLFADPLDNRADTRILAANWSVIPLLDGGQQLPALTFLNQSACAVDNHAAAFIDTNEDRAVVILSVDFTPSNFFEAFHTALAIANNENPKLLQNKLVLMGCAGTNNKDKPLDCPLQIKDVSGKDPYPGASTIVTLSLDRSYTLTATVTLAASFVSLSLVDKSTGAVVATANATLPDSMLVRKFGVVFGSKGDAKDATCGKNYVYKGGADEASATVVHSDKFDAGKLADFWGTLDMNLIGKPVPSLTKNGACAVAAAVLVSNAALPTLSSRNSTIRVGFEFNSRNITQDPTTYIQLIGKRDSGEYIVLRAGCENVNPGEVSPSNPGNCAPAINLGDDCSSGVRLRGTPQLISTEKYSRATLEIGGGKAILSIFDNLNSVKTTLETAGWEKVFATTDFIMASVAIDPRTDTPAEKCVRNFVVESAASTSFSVGSTQWPAPTGCNNNNGNNGNNTNNNNNNNNNNNNNGTNSNNNNNNNGTNSNNNNNNNGTNNGNNTNNGGNGCVGNMLTLVDPQNGRVTLCSKQSVGVGGSVAVTCVWAAAGSNTWNPLADLKEAAPPHSDHVVNGANNSQFGVVRQGLLYRPSQTANWQLQAMWECAQCGK* # PASA_UPDATE: g13672.t1, single gene model update, valid-1, status:[pasa:asmbl_1177,status:3], valid-1 NODE_1312_length_12206_cov_40.9627 . gene 3344 6613 . + . ID=g13672;Name=g13672.t1 NODE_1312_length_12206_cov_40.9627 . mRNA 3344 6613 . + . ID=g13672.t1;Parent=g13672;Name=g13672.t1 NODE_1312_length_12206_cov_40.9627 . five_prime_UTR 3344 3479 . + . ID=g13672.t1.utr5p1;Parent=g13672.t1 NODE_1312_length_12206_cov_40.9627 . exon 3344 6613 . + . ID=g13672.t1.exon1;Parent=g13672.t1 NODE_1312_length_12206_cov_40.9627 . CDS 3480 6434 . + 0 ID=cds.g13672.t1;Parent=g13672.t1 NODE_1312_length_12206_cov_40.9627 . three_prime_UTR 6435 6613 . + . ID=g13672.t1.utr3p1;Parent=g13672.t1 #PROT g13672.t1 g13672 MSGQPPLCQNGYVYYKNLSTCVSCAESVSKAVIGTFCNGTESVYPCSKGMYCPTVSQWIPCPAGSICREGSFEPSGCFGGRLTCGEEGLGECANFLPATVLFAALFIGVWIAIHVILSLIESHKQKQSTLHFQITSRTIHDLTLAFPYAMRWRRKTLVRRKRTALGMQQELKLSRQRIAEVTASQSSIGPSDLSQSAHGKLSRTSLVTSMPEMVQTSKYENGRRFSDNSIRLPAYLQDSVRRSLLSLADKVRAVRMEAVTADAFSDIPHSRAFKHALRRLHEPPASMDIEMEQVSVAADPAHAAKLANDETGGERPVVKDVSCTIRAGKFTAIMGPSGCGKSTLLKALAAAGEGPVFVAGGIKYGGEARPLSKPLPDMCFMPQESVIYPDLTADETVRYARLLSKGPFMAFDSEEANTPYDATDELVDEVLDVLGLGGVRGRIVGAEDGAEGERSAVSGGQRRRIVLAMEIVKRPSTLLLDEPTSGLDSTSTLVVMRALRDLANNGTTVIAVIHQPGYRVFKMVDDLVLLTGQGTLAYNGEAAGVLPYLEEIGYPRPIHASTPEFALDVAVGLARRKGVKKPDGAEFAAEILAEKWKVVSPDRRAQLKRRGTKPHLSRSTTKNTLVNHLPKLTPKKTTSEVTILVSIEAIGDKLDAIEAARNLYEMTNSKRRGDTHLRQFAIVTLRTILQLARGRKVLLIDGMLMVLMSLAINLIYGDLAPFDQASQHSALGLTLGLTGVIVGLRIFGADRHVYQKEKAAGILPIPYYLGKIIGSLPLIFVNPFILALSFCLIVSPRAPLAEYFVAFLLTQWAAMSIGVLASLLFRRKIALPVSVLYILIAFLCNSVTQKEKELEDKLGSFGTFLSRVSLLSYGTKALMFSELTRYPPVWAEGVTKTMSLIGFGVPVPGPFHPDGDFAPAGVAWRNLCLCLFLFAFIAHVLGGISIYLSSFESLDSNVLMERLRVMLRKRRRQRNTVAPGTILP* # PASA_UPDATE: g11290.t1, single gene model update, valid-1, status:[pasa:asmbl_7060,status:12], valid-1 NODE_4175_length_2074_cov_56.5608 . gene 1 2003 . - . ID=g11290;Name=g11290.t1 NODE_4175_length_2074_cov_56.5608 . mRNA 1 2003 . - . ID=g11290.t1;Parent=g11290;Name=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 1994 2003 . - . ID=g11290.t1.exon1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 1994 2003 . - 0 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 1659 1836 . - . ID=g11290.t1.exon2;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 1659 1836 . - 2 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 1242 1320 . - . ID=g11290.t1.exon3;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 1242 1320 . - 1 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 917 1038 . - . ID=g11290.t1.exon4;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 917 1038 . - 0 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 687 767 . - . ID=g11290.t1.exon5;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 687 767 . - 1 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 279 391 . - . ID=g11290.t1.exon6;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 279 391 . - 1 ID=cds.g11290.t1;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . exon 1 66 . - . ID=g11290.t1.exon7;Parent=g11290.t1 NODE_4175_length_2074_cov_56.5608 . CDS 1 66 . - 2 ID=cds.g11290.t1;Parent=g11290.t1;3_prime_partial=true #PROT g11290.t1 g11290 MPIYLGEEHYAQLASIIAEREKLAAEIAALKNEIESCDKELQAIDHARLSASTVLVGQPDPARVLEEAAEALKNKANTGRMKFNMDPFKGVEWLIENGVLSKDSDDVAKYLYEEGEGLRKKAIGEYLGKNKPFNLDVLTKFVALHKFEGLTFDQALRKFLVSFRLPGEAQQIDRIMERFASRYHGENPTVFVNADTAYVLAFSVVMLNTDLHNPSV # ORIGINAL: g14194.t1 original gene structure, not modified by PASA NODE_3064_length_4418_cov_37.0797 AUGUSTUS gene 2668 4286 . - . ID=g14194;Name=g14194.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS mRNA 2668 4286 . - . ID=g14194.t1;Parent=g14194;Name=g14194.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS exon 4198 4286 . - . ID=g14194.t1.exon1;Parent=g14194.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS CDS 4198 4286 . - 0 ID=cds.g14194.t1;Parent=g14194.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS exon 2668 3943 . - . ID=g14194.t1.exon2;Parent=g14194.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS CDS 2668 3943 . - 1 ID=cds.g14194.t1;Parent=g14194.t1 #PROT g14194.t1 g14194 MAIAVCRADIIHSLFTSAITLLAVRLLHPRWSPRVVFALCFGYLIFFRLGYLIGISPPRPQANAVQLLLTLKLVAFAFHASDELTGKREGNHKTASVSDNDGSVTAASVLPTAATLSPLQFYAFCYSPCGMLTGPVYSVRVFAAMCENTQLSQVDTLKQAMHRLKDVVYFGVGFVALSRLFPLDYMRTEEFLNDTTFLYRLFYALFCVIQFRHRFIAGWVLAESGCRASGLGTNLPTVGAGKNPDETTTSMADCDGVKQKTDPRLFQDTTAVQNIDAFGVEFGSSVRAIIRLWNMSVQNWLRDFVYVRFPVRSMRMLVTFLVSAFWHGVHPGYYLFFLFVPMFQASELAIKRCVLPFEHLKPIALLYHAIALFLAGMTFPYLGIGFMLLDLGSTLAVWKSIYFAGHLVALGMWLISFVLPKKPHHLRRHIAEAHGEGSADLALAVAQSSSKKHK* # ORIGINAL: g14193.t1 original gene structure, not modified by PASA NODE_3064_length_4418_cov_37.0797 AUGUSTUS gene 708 1934 . + . ID=g14193;Name=g14193.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS mRNA 708 1934 . + . ID=g14193.t1;Parent=g14193;Name=g14193.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS exon 708 1934 . + . ID=g14193.t1.exon1;Parent=g14193.t1 NODE_3064_length_4418_cov_37.0797 AUGUSTUS CDS 708 1934 . + 0 ID=cds.g14193.t1;Parent=g14193.t1 #PROT g14193.t1 g14193 MAVSYTLSRVCVFIWPSLQGEPVNRRTFLLRVVPTGVAGALDIGLSNFSLLYISVALYTVCKSSIPFWTFVVSIALHLERARMGRVLPMVAVCVGVILGAINDGHKHQHTSHSAVETAPTVSPLGIFLVMGAAVMGGVRLPFMQLLMQRTGGDAGDAPQQQHQQQQQHHHVLLPSHHPRVAAITSDTSRAPLERKWSGPDAHHNAPAEVVDRLHYANHRANTLRVLRQGSSATLLSDGSKMSSIDDAALYPRDDDLPTHAHAHAGSTIVDTHSGSAADVSIAPPKLPRRHPVTTLYYVAPVMGVSLLPLALVFEYGKLWVFYESGLLWQNVVLSMVGGVLAFMMTLSAFHVVHRTSGITLSLAGVVKEVLTILLSVAILGDHLSPLNYFGLFLSASGIVAFHLAEEHH* # PASA_UPDATE: g2915.t1, single gene model update, valid-1, status:[pasa:asmbl_7155,status:12], valid-1 # PASA_UPDATE: g2915.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7156,status:12], valid-1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . gene 127 1792 . + . ID=g2915;Name=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . mRNA 127 1792 . + . ID=g2915.t1;Parent=g2915;Name=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . five_prime_UTR 127 158 . + . ID=g2915.t1.utr5p1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . exon 127 1031 . + . ID=g2915.t1.exon1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . CDS 159 1031 . + 0 ID=cds.g2915.t1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . exon 1205 1351 . + . ID=g2915.t1.exon2;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . CDS 1205 1351 . + 0 ID=cds.g2915.t1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . exon 1477 1792 . + . ID=g2915.t1.exon3;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . CDS 1477 1602 . + 0 ID=cds.g2915.t1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . three_prime_UTR 1603 1792 . + . ID=g2915.t1.utr3p1;Parent=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . mRNA 127 1792 . + . ID=g2915.t1.1.5b6be70c;Parent=g2915;Name=g2915.t1 NODE_4260_length_1919_cov_96.0152_potentialcontaminant . five_prime_UTR 127 158 . + . ID=g2915.t1.1.5b6be70c.utr5p1;Parent=g2915.t1.1.5b6be70c NODE_4260_length_1919_cov_96.0152_potentialcontaminant . exon 127 1031 . + . ID=g2915.t1.1.5b6be70c.exon1;Parent=g2915.t1.1.5b6be70c NODE_4260_length_1919_cov_96.0152_potentialcontaminant . CDS 159 1031 . + 0 ID=cds.g2915.t1.1.5b6be70c;Parent=g2915.t1.1.5b6be70c NODE_4260_length_1919_cov_96.0152_potentialcontaminant . exon 1205 1792 . + . ID=g2915.t1.1.5b6be70c.exon2;Parent=g2915.t1.1.5b6be70c NODE_4260_length_1919_cov_96.0152_potentialcontaminant . CDS 1205 1432 . + 0 ID=cds.g2915.t1.1.5b6be70c;Parent=g2915.t1.1.5b6be70c NODE_4260_length_1919_cov_96.0152_potentialcontaminant . three_prime_UTR 1433 1792 . + . ID=g2915.t1.1.5b6be70c.utr3p1;Parent=g2915.t1.1.5b6be70c #PROT g2915.t1 g2915 MSAKCVLLLAAVAVFFVACAHDAQASKACLNNEGQAVDWWFMYKLPKLSKHNNPSVAGGYGFAYHDSESNGAGLKIFERGLDDNSNAVALVHTLRQIATKSSEEAVHMFSFEAEDALNRTLATGDFGFLIYNDEPFSGASSDTYGHTKGVVGFDSADGFWLVHSTPRYPSNTGSEAFYFPENEVIYGQTFLCVSFDLSEIDSVGNQLLYNRPNVYSKLLPAKLASKLPNIKKVFDGEFISEGDSSTVSLTSAGNGKFVSFAKNKNWNQDLYITLVAPHYKTDFQVETWQRQGTLPSYCTPEYAYDILNVDEVTIEGTPFLETQDHSKWAASLKASPGVVCVGDINRMSTQRKRGGGTVCFQNSSLWKSLSASVSQREDCKK* #PROT g2915.t1.1.5b6be70c g2915 MSAKCVLLLAAVAVFFVACAHDAQASKACLNNEGQAVDWWFMYKLPKLSKHNNPSVAGGYGFAYHDSESNGAGLKIFERGLDDNSNAVALVHTLRQIATKSSEEAVHMFSFEAEDALNRTLATGDFGFLIYNDEPFSGASSDTYGHTKGVVGFDSADGFWLVHSTPRYPSNTGSEAFYFPENEVIYGQTFLCVSFDLSEIDSVGNQLLYNRPNVYSKLLPAKLASKLPNIKKVFDGEFISEGDSSTVSLTSAGNGKFVSFAKNKNWNQDLYITLVAPHYKTDFQVETWQRQGTLPSYCTPEYAYDILNVDEVTIEGTPFLETQDHSKWAASLKASPGVVCVSKQSTVSRWLQTFVPTRTPALWGLI* # ORIGINAL: g1509.t1 original gene structure, not modified by PASA NODE_3192_length_4053_cov_40.5563 AUGUSTUS gene 199 3192 . + . ID=g1509;Name=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS mRNA 199 3192 . + . ID=g1509.t1;Parent=g1509;Name=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 199 312 . + . ID=g1509.t1.exon1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 199 312 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 427 560 . + . ID=g1509.t1.exon2;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 427 560 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 761 836 . + . ID=g1509.t1.exon3;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 761 836 . + 1 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 1083 1212 . + . ID=g1509.t1.exon4;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 1083 1212 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 1513 1658 . + . ID=g1509.t1.exon5;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 1513 1658 . + 2 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 1818 1907 . + . ID=g1509.t1.exon6;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 1818 1907 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 2078 2203 . + . ID=g1509.t1.exon7;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 2078 2203 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 2418 2539 . + . ID=g1509.t1.exon8;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 2418 2539 . + 0 ID=cds.g1509.t1;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS exon 2928 3192 . + . ID=g1509.t1.exon9;Parent=g1509.t1 NODE_3192_length_4053_cov_40.5563 AUGUSTUS CDS 2928 3192 . + 1 ID=cds.g1509.t1;Parent=g1509.t1 #PROT g1509.t1 g1509 VSVLVDSLVCIEIWKQKVLPLLMDLKFAESSTITPYMTIHHEAVLMNLLETILYYRSACESAGDSLLELGDYCYRRLVELSTLSDGDQDESKPTKETAERMLKMTSEEQLAQQHEKMRLDICIKAVSILRYMSDHLDALPVSVVTRLLRTHDIIVALVPLIEHPPWIRIRPGGKMFKYNESVWTEVKGGDRLKLSKSEAQVWIALYNFMMDPECRRKYEFNSHNKGEILKLRAHFNEVLVDQIPVLGDLQRQLEHLAVVDPPQPQSALVLEQIPEVRDGILAEYKGRWAEVAKYQKEKIFTLSHEERVEQAKRLAATYNFDAMEKMIPTEPKCAECGETALKRCSRCQNEWYCGRECQVKHWGKHKEMCALLASAQSAVTAGTQQAVSPAISVAANGAKH* # PASA_UPDATE: g10011.t1, single gene model update, valid-1, status:[pasa:asmbl_2136,status:12], valid-1 NODE_160_length_34069_cov_40.435 . gene 30194 30946 . + . ID=g10011;Name=g10011.t1 NODE_160_length_34069_cov_40.435 . mRNA 30194 30946 . + . ID=g10011.t1;Parent=g10011;Name=g10011.t1 NODE_160_length_34069_cov_40.435 . five_prime_UTR 30194 30304 . + . ID=g10011.t1.utr5p1;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . exon 30194 30352 . + . ID=g10011.t1.exon1;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . CDS 30305 30352 . + 0 ID=cds.g10011.t1;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . exon 30551 30637 . + . ID=g10011.t1.exon2;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . CDS 30551 30637 . + 0 ID=cds.g10011.t1;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . exon 30782 30946 . + . ID=g10011.t1.exon3;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . CDS 30782 30907 . + 0 ID=cds.g10011.t1;Parent=g10011.t1 NODE_160_length_34069_cov_40.435 . three_prime_UTR 30908 30946 . + . ID=g10011.t1.utr3p1;Parent=g10011.t1 #PROT g10011.t1 g10011 MSKRMMQSHPCAVEQKASYKCLEENVDRGKCQDNFDAYRECMRKAKEEAIAAKWAEQGGYFGLGEKRRPGEAAPNTTANSDTSKGK* # ORIGINAL: g10005.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 6301 8082 . + . ID=g10005;Name=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 6301 8082 . + . ID=g10005.t1;Parent=g10005;Name=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 6301 6474 . + . ID=g10005.t1.exon1;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 6301 6474 . + 0 ID=cds.g10005.t1;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 6765 7024 . + . ID=g10005.t1.exon2;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 6765 7024 . + 0 ID=cds.g10005.t1;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 7272 7460 . + . ID=g10005.t1.exon3;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 7272 7460 . + 1 ID=cds.g10005.t1;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 7752 8082 . + . ID=g10005.t1.exon4;Parent=g10005.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 7752 8082 . + 1 ID=cds.g10005.t1;Parent=g10005.t1 #PROT g10005.t1 g10005 MSVLVYDEFVDEVARGWKIDKSFQRSEALPSSTISARYPGSGLAHWLPKSSVPPGQGQGPAALPSCSLLKVNFDAIPEALPTRQSLLLKHIAAKASPDDAKKATFAPSTHVQTVEVVTMGGFDSAYTMSTPMAYRWVDGGAARKSVEKRDEQQQRTLGIARVASPNEFGPKAQSFQPVGRLLEDARRAASPGVNMDRTLSTRSDLTSLSGPVRSRSPIGSASMQQRKEKPPIPSRRPVVKPQAFSYMNPMASAGYEKAPSGPNPSLPGKATISQFEQRVAEISNLQADTVRWERRTAYKLRRESRAAAMPKSRRDYA* # PASA_UPDATE: g10010.t1, single gene model update, valid-1, status:[pasa:asmbl_2135,status:12], valid-1 NODE_160_length_34069_cov_40.435 . gene 28994 29437 . + . ID=g10010;Name=g10010.t1 NODE_160_length_34069_cov_40.435 . mRNA 28994 29437 . + . ID=g10010.t1;Parent=g10010;Name=g10010.t1 NODE_160_length_34069_cov_40.435 . five_prime_UTR 28994 29059 . + . ID=g10010.t1.utr5p1;Parent=g10010.t1 NODE_160_length_34069_cov_40.435 . exon 28994 29132 . + . ID=g10010.t1.exon1;Parent=g10010.t1 NODE_160_length_34069_cov_40.435 . CDS 29060 29132 . + 0 ID=cds.g10010.t1;Parent=g10010.t1 NODE_160_length_34069_cov_40.435 . exon 29286 29437 . + . ID=g10010.t1.exon2;Parent=g10010.t1 NODE_160_length_34069_cov_40.435 . CDS 29286 29416 . + 2 ID=cds.g10010.t1;Parent=g10010.t1 NODE_160_length_34069_cov_40.435 . three_prime_UTR 29417 29437 . + . ID=g10010.t1.utr3p1;Parent=g10010.t1 #PROT g10010.t1 g10010 MGNHHSHSHDSHGHSHDNHGHSHGACAKPAGKEGQDAAPTTASPQSSQPAAAPSSESTPSSDSSTSH* # PASA_UPDATE: g10007.t1, single gene model update, valid-1, status:[pasa:asmbl_2133,status:12], valid-1 NODE_160_length_34069_cov_40.435 . gene 11465 19181 . + . ID=g10007;Name=g10007.t1 NODE_160_length_34069_cov_40.435 . mRNA 11465 19181 . + . ID=g10007.t1;Parent=g10007;Name=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 11465 11582 . + . ID=g10007.t1.exon1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 11465 11582 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 11802 14762 . + . ID=g10007.t1.exon2;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 11802 14762 . + 2 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 14977 15110 . + . ID=g10007.t1.exon3;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 14977 15110 . + 2 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 15457 15618 . + . ID=g10007.t1.exon4;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 15457 15618 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 15892 16164 . + . ID=g10007.t1.exon5;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 15892 16164 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 16477 17162 . + . ID=g10007.t1.exon6;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 16477 17162 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 17459 17663 . + . ID=g10007.t1.exon7;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 17459 17663 . + 1 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 17876 18141 . + . ID=g10007.t1.exon8;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 17876 18141 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 18441 18639 . + . ID=g10007.t1.exon9;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 18441 18639 . + 1 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . exon 18807 19181 . + . ID=g10007.t1.exon10;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . CDS 18807 18944 . + 0 ID=cds.g10007.t1;Parent=g10007.t1 NODE_160_length_34069_cov_40.435 . three_prime_UTR 18945 19181 . + . ID=g10007.t1.utr3p1;Parent=g10007.t1 #PROT g10007.t1 g10007 MIIIDDMVTAVPTAAAAALPKTSGIAPATIASTSSLRTEGNVDASAPRSDQSRQKRVRQKETKKAQSPANSDPPPQSGAPLLSVVKGKAPEVDAAESSSPSSRSAKGSRASADGKAPSTGHNGSTKRESPAMGGTKDARDATMGSTKELAKEPAKKATKEVVAKESTKSKDAPTTKEDATKESATKEAVTKEAVTKEAVTKDVATKVPPKTREVTSKDAPAKEGSKDPIKTTNATKDANAENNKDNKDSRGSSRGASAGTRSGGGGGGSGDAPVPANNRDGRRSRGRDRRKDSVAGSPSSGVANTTMAPTPDAPAQVQSAVASSSPSTRADVTGASSPSPSPCPSVKLPPIETAKVTSIVTVEANVVTVEANVATAAAETGSEETTKKKKKKKKLGAESRDNAAAESRDANSDGNSVPAVKSEEASDVKAGGNDATKLETDNKAPRESKKKKKGAVQSREDDEILAAIEEVNRLTKGDVKGDANAKDIKDGAAQPQKASASASASLSLSSSGGAAGASKSAAAKKKGSAHQTGLDALMEIERQAAEKRKAEEAALEEERARDIMRQVEERRKLKKLAEEEKERERLAKLRPRYVRFDFTDQMEKGCITIYHNNMTSDMVQTTFGEDFVDVSVPEAEWSDRYLLAGRIASDRCSVKVGVKTVEVRLSKQQPGSWIKPLSLHDSKSVSVVNVDAQDDEDIDDIQPAGGSDAHSGSASASASIEKKARVLVDDEFPAPDRDKQLAPSYTHYSRDLETQVVRIPAARAWVRFAAESLVQVRYIRHNDTDGLVCRWDFAPLAHIVPSQCSHSFDGGILTLLLHKSSPGQWSALESSSRQQQQQQQQQQQQHRASSSSSTSTSLSREADGAVSDILSALRARDKTPAFDAMEVDYSSHVLDSKATEAKIAYSSAYSSTSVISEDVEWSASGSVSAATSSMRSLFASADDNDDDAESSTSTLDSKYRLGKFMGRASMYGDDDKDDADEDVKPLENPVVVPGCTGLRNLGNTCFMNSILQCLSHTSDLRSFFLQGTYRGDINAKNPLGMGGLIAEGFANLLRRLWSGRASSESPSALKQVVGQFARAFVGYAQHDSQEFMAFFLDGLHEDLNRILTKPYVETAEQRDGESLEELADRAWENHRKRNDSIIVDTFQGQFRSTLNCPECNKVSVTFDPFMYLSLPLAPKKDRRIDVTFVPMPNPDDDADNVGKMTVFAVRVASHETIAHLRKAVAEATKIPLDRLSIVEIYNAKVQRIYVDKEDVGEILSNDKIFAYETVVAAAPRESGRRPSMLQKAAEVPAEGPCVFPATSRVVNHPVFFECAFCFAKAGAPVAIVTSMDEEQEAAVGAGTATAPNGNATEASTSESAGDESTPTSSSPASGGGIVALEACASCQSVAYCSDACKTQHAYMHRSSCYKPYSRSSNMGLPAMLSFESHMPTIGQIRRTVMASIRHLLKTPLSGDADPLPVVIVFELASGEIVNLSDPSHVQSDAIDLRTCRSVHLEWSPDSVTDHFRTNWAEDIVTDASVSAHNAEGRGVRLDRCLDMFTESETLSPDEAWYCSACKKHQEATKTMSLWRLPKVLVIHLKRFSFTKHRREKLSTEVEFPLRGLDLSSYVPAGTLAGTAPVYDLFAVSNHFGSAWGGHYTASGLHSKTNEWYNFDDSNAYKTGRPSACSSSAYVLFYRLRDDASPFLIEPAADPEESEDSAPRSYGLPSYKRY* # ORIGINAL: g10004.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 2573 5804 . + . ID=g10004;Name=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 2573 5804 . + . ID=g10004.t1;Parent=g10004;Name=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 2573 2632 . + . ID=g10004.t1.exon1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 2573 2632 . + 0 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 2799 2903 . + . ID=g10004.t1.exon2;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 2799 2903 . + 0 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 3070 3194 . + . ID=g10004.t1.exon3;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 3070 3194 . + 0 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 3419 3868 . + . ID=g10004.t1.exon4;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 3419 3868 . + 1 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 3994 4358 . + . ID=g10004.t1.exon5;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 3994 4358 . + 1 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 4511 4886 . + . ID=g10004.t1.exon6;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 4511 4886 . + 2 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 5174 5384 . + . ID=g10004.t1.exon7;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 5174 5384 . + 1 ID=cds.g10004.t1;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 5784 5804 . + . ID=g10004.t1.exon8;Parent=g10004.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 5784 5804 . + 0 ID=cds.g10004.t1;Parent=g10004.t1 #PROT g10004.t1 g10004 MFAVLYKALQLLNLDTAAALIVGPRLLQGCLQAIGDFFLFKLARRIFGAGVARWTLLCAVLSWFQFYCGVRTLSNSAEASLMNVALYYWPWTGTTYGFGRLGLFKSLSMGALACIVRPSCVITWFYLAAEFVAYGPATQATQLPSLQESSSQSLHRNESAQESERHSATTTEDGAGSGHVAGESNLAASAVAKEGMLQEQGHHGPNEQQQQQQRQQQRDQQKTGSNAALDSPSHRLRVLLLTATPLGFAAIALTAAIDSHFYGRFVFPPFEFFRFNVLRGGGAFYGSHAWHWYASQGIPTVLFTLYPFFLLGVRGCVGGLLAPFRLLLFQVVAWSALSSHKEFRFLMPALPTMLCYCGRAFGRIVEPEGKPVRHRAAFYAFVFIVATQLPLAFYTSFVHQSGPIDVIQALREDLESNHPGCLVANEHAAAGSLAQYSHAVVDPPLRDSDALGALFGDGIACDAFVLFLLPCHSTPFYSHLHLPVLMRFLECPPSDDPEYVDEADVFFHAPVTWIDSNWPLHTSRVAVVGPWNDRRIDASPSHVVVGAALYPVIFEQLRQRGFQQEYHKVP* # ORIGINAL: g10009.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 23354 26851 . - . ID=g10009;Name=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 23354 26851 . - . ID=g10009.t1;Parent=g10009;Name=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 26849 26851 . - . ID=g10009.t1.exon1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 26849 26851 . - 0 ID=cds.g10009.t1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 26588 26632 . - . ID=g10009.t1.exon2;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 26588 26632 . - 0 ID=cds.g10009.t1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 25550 26431 . - . ID=g10009.t1.exon3;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 25550 26431 . - 0 ID=cds.g10009.t1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 24760 25206 . - . ID=g10009.t1.exon4;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 24760 25206 . - 0 ID=cds.g10009.t1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 23718 24259 . - . ID=g10009.t1.exon5;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 23718 24259 . - 0 ID=cds.g10009.t1;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 23354 23465 . - . ID=g10009.t1.exon6;Parent=g10009.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 23354 23465 . - 1 ID=cds.g10009.t1;Parent=g10009.t1 #PROT g10009.t1 g10009 MNSETDYAPPKPVAIGASAPADRISAAQRLAQHDIRKGMAGMYASLPVGPYGPRPLWAHMPPGAAAAALAHAAQPTHATRTTHTTHTGRSEREDLRIVTGPHHKIIDVKPARHRQPPKKIPPPHKSGGRSASVRGSRGAPYDAARDKATALMHKLAVCIAGLDAGEDVSGTASKLMGEAAAMTTKRGLLIPRGTRRHLAGESGGMGDELKSDAGSFPNARTVLDMLRRGECGTGVGASAMVDACSRGGGGSLPVSAVEKHVVDPARARRTSVLLSRDVARDREVARRAREAAEAHRQRILRGSPSPPPVKDDRIARPPSRDVSSMRSPSPTSNRAVTQREIARQAWLDAEADRQMAELRALKEEAARGRGGDGDVAVPTGRAGVDSTLVRRVTRIGAEAISRNSDKLASLLLDELLEDTAGEMKRLDAAKSGAAMAAMLPEAAMAGVMEGIARLDREEEDIRRRWLGATEGHHFEVRRNDTERLVAFTNGGANDAPRASNVRHVDVNGDDDRNDAMFDIESDRRRERLQRLEALRRLNEGSDVEGVDLHANAGRKHGNDDRPGGDGDGDGDGDGAEGRHVTRVSVAVCGDDGREGKVLGYVSAAMLDRIRGGKRRFEAHVKRTSHVSPDSMFDQYHLFEHLEKTLLDDVIGQTAAELSSFCDDYGEYVCHAEFTPR* # ORIGINAL: g10003.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 1892 2233 . + . ID=g10003;Name=g10003.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 1892 2233 . + . ID=g10003.t1;Parent=g10003;Name=g10003.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 1892 2233 . + . ID=g10003.t1.exon1;Parent=g10003.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 1892 2233 . + 0 ID=cds.g10003.t1;Parent=g10003.t1 #PROT g10003.t1 g10003 MPGESGAQPRVSTQSPSSSMHSRQGATSTASATSSASNGNDGADGRATTLKPHAPTIGASDTKILAILVALRLLNAIAVRTWFVPDEYWQSLEVAHKIVFGYPPILRDVRLEL* # ORIGINAL: g10006.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 9227 10454 . - . ID=g10006;Name=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 9227 10454 . - . ID=g10006.t1;Parent=g10006;Name=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 10405 10454 . - . ID=g10006.t1.exon1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 10405 10454 . - 0 ID=cds.g10006.t1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 10238 10305 . - . ID=g10006.t1.exon2;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 10238 10305 . - 1 ID=cds.g10006.t1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 10081 10122 . - . ID=g10006.t1.exon3;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 10081 10122 . - 2 ID=cds.g10006.t1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 9839 9921 . - . ID=g10006.t1.exon4;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 9839 9921 . - 2 ID=cds.g10006.t1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 9542 9643 . - . ID=g10006.t1.exon5;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 9542 9643 . - 0 ID=cds.g10006.t1;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 9227 9397 . - . ID=g10006.t1.exon6;Parent=g10006.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 9227 9397 . - 0 ID=cds.g10006.t1;Parent=g10006.t1 #PROT g10006.t1 g10006 MEAVAHVQVLVESFFDCLKKLDDLNVSGLDALAKYQGGPGESAYKDLQESHKALTDAHSELLRTHLDIGSALENTPVDALEALMCRREGVSTSLMDKVDLCAMLFDCYESEYSLKDSTLRSITFETPPVTLVAFHALWDRRPFLRGDARAAEAHAKLFAAFAPQRPRSAAK* # PASA_UPDATE: g10008.t1, single gene model update, valid-1, status:[pasa:asmbl_2134,status:3], valid-1 NODE_160_length_34069_cov_40.435 . gene 19483 21968 . + . ID=g10008;Name=g10008.t1 NODE_160_length_34069_cov_40.435 . mRNA 19483 21968 . + . ID=g10008.t1;Parent=g10008;Name=g10008.t1 NODE_160_length_34069_cov_40.435 . five_prime_UTR 19483 19539 . + . ID=g10008.t1.utr5p1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 19483 19629 . + . ID=g10008.t1.exon1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 19540 19629 . + 0 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 19754 20258 . + . ID=g10008.t1.exon2;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 19754 20258 . + 0 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 20469 20621 . + . ID=g10008.t1.exon3;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 20469 20621 . + 2 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 20987 21037 . + . ID=g10008.t1.exon4;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 20987 21037 . + 2 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 21249 21523 . + . ID=g10008.t1.exon5;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 21249 21523 . + 2 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . exon 21708 21968 . + . ID=g10008.t1.exon6;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . CDS 21708 21773 . + 0 ID=cds.g10008.t1;Parent=g10008.t1 NODE_160_length_34069_cov_40.435 . three_prime_UTR 21774 21968 . + . ID=g10008.t1.utr3p1;Parent=g10008.t1 #PROT g10008.t1 g10008 MSVAEFDVSALPRDALNFIIQYVDAHTLRLVCRTWRDAIDAKSDYWHNRYCDSYGDITAVTAILRDAGCAPSVSFGGGDPLGECLGWTQTSDENGVVWMRRYAARVALTDEDLTRLSAHAKDCFKTAEALLHECRQMHQNAQEQQGSGNHADCEMPDAEGAGTHPEQSGQGRVAPPAAGAADVEKKIDAACSLLLKVLTILPEHRPTFFLLAFVCHVLAAEEETLQIIEMMDAIEADDGEDKSMQRSIEELRKEVTRLVQTQEETEEHAALLDDGRRSLSNAVRGVLGRIFDRFDRDTDGILSMSEFSEYVFRTNGQRIGPPQFRYFLSNFPSTKKGLTKAGFLEFYLRQTLEDPEETWKDLKSHGYNRFLVPETPGSA* # PASA_UPDATE: g10012.t1, single gene model update, valid-1, status:[pasa:asmbl_2138,status:12], valid-1 NODE_160_length_34069_cov_40.435 . gene 31403 33697 . - . ID=g10012;Name=g10012.t1 NODE_160_length_34069_cov_40.435 . mRNA 31403 33697 . - . ID=g10012.t1;Parent=g10012;Name=g10012.t1 NODE_160_length_34069_cov_40.435 . exon 33507 33697 . - . ID=g10012.t1.exon1;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . CDS 33507 33697 . - 0 ID=cds.g10012.t1;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . exon 32946 33074 . - . ID=g10012.t1.exon2;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . CDS 32946 33074 . - 1 ID=cds.g10012.t1;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . exon 32495 32635 . - . ID=g10012.t1.exon3;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . CDS 32495 32635 . - 1 ID=cds.g10012.t1;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . exon 31403 32341 . - . ID=g10012.t1.exon4;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . CDS 31498 32341 . - 1 ID=cds.g10012.t1;Parent=g10012.t1 NODE_160_length_34069_cov_40.435 . three_prime_UTR 31403 31497 . - . ID=g10012.t1.utr3p1;Parent=g10012.t1 #PROT g10012.t1 g10012 MQVKSVHFSRLRRRSDETIERLARFLPSLEQIALPGCLLVTSGAFMSLTACTSITSIDFRGCARICDRAVSSLASACPRLERFVTGQCPLLTDLSMLMLAQCTRLTAVEITFCPSISPDGIQALTACTQLREASFSTGVGLGNEVLAAIGRNCRELRTLFIGNTSNAGLPGFAAIGHLSHLRRLSLKRCDMMTDTCLMHLSHLPDIELFQLSNAPLVTDGGLAAIVSRCKKLVSLAVAGCVSTNGAFLSRFASPGNLRRLSVARCPRFDDLAAKRHVTAFTGLESLDLSWTSVDNDALSAVCAACTGIIHLCVDGCRGIGDVGVTRVISLLPSLSEVSVEGCEGVTDDGLVHMAASVGDNCGTPPRLPRIRLSGCPHVTQRGVAAVALAGSGERSRGVGVRVVGGAEVQSNPSPFAVTSSGEAWAPFGTPMSLL* # ORIGINAL: g10002.t1 original gene structure, not modified by PASA NODE_160_length_34069_cov_40.435 AUGUSTUS gene 442 614 . + . ID=g10002;Name=g10002.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS mRNA 442 614 . + . ID=g10002.t1;Parent=g10002;Name=g10002.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS exon 442 614 . + . ID=g10002.t1.exon1;Parent=g10002.t1 NODE_160_length_34069_cov_40.435 AUGUSTUS CDS 442 614 . + 2 ID=cds.g10002.t1;Parent=g10002.t1 #PROT g10002.t1 g10002 RTTIRRSSGTFPRTRDRVRIPSSHTMPAARSTSCNGLRLSRIGLAYALDRNSRLLKC # ORIGINAL: g1705.t1 original gene structure, not modified by PASA NODE_1794_length_9213_cov_42.623 AUGUSTUS gene 3347 7378 . - . ID=g1705;Name=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS mRNA 3347 7378 . - . ID=g1705.t1;Parent=g1705;Name=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS exon 6890 7378 . - . ID=g1705.t1.exon1;Parent=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS CDS 6890 7378 . - 0 ID=cds.g1705.t1;Parent=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS exon 4085 6736 . - . ID=g1705.t1.exon2;Parent=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS CDS 4085 6736 . - 0 ID=cds.g1705.t1;Parent=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS exon 3347 3862 . - . ID=g1705.t1.exon3;Parent=g1705.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS CDS 3347 3862 . - 0 ID=cds.g1705.t1;Parent=g1705.t1 #PROT g1705.t1 g1705 MTRFSAHEKRHTSPFIERVRLVHSWILQWSLAERLDFAKFVIDMCYQDPGPHISKKVTSSPARYNYPMLAAQQKMMKVKNLDFIAFLPRPIVAQILSYLDPVTLCRCAQVSWRWKTFTEANAVWKDRCHRYRWYLKPPARETDRAVYKTLFVQNVLRYGYPKEPLLRSPSPFRRKAWKDASGNPRDLDTVNRPGSPPQRGRDFKARPVPKVVLTKTHPASPSHRPHSAPSARHAIPNTERPSFPGRSRVDSANTSGLLDAENTVEKDLARKTEMNFLTSTMFRRMTYKPTTPTPQVKKGAIVAEVDIDQDRSLRKASGDPSTRRSVTTTTVAVTTPRPPTHVRTRPGEKKNASGKTAPVPTQVEEDWLPDDAYPRLLLVSSAVPAHAVLTDAARAEVIVVLYDHESSTIDVISARMSRALKGRRARSIGIVVPGGPGFMEMSDDARIDRLSLAKRPSLRRFLKSINSCLVPSGRVDLLVPGLATTNEGHKFVAELEVEGKLRCDALDDLAGDIVSTLGRTDHSGAIAQAGLYFDRRRLEAWRHVAGEVADAAAEVRTALAEQLGDRQSEMFQRMAGRIAADALAGGSDGATAVSEAIPLIREAITMVARRAPEHPAKFLAKHFAGKVSAGSDSDGSDSDDDFSDSSSESEDSSSEEDDASVASYEDDNEVAVGRSMRETIAKEKLKKKEEKKKRREERRKRREEKKAERSKKNKKSAGGKKNGDDDNESIASYEDDNEVVGGAAKSGTKKGAAKKSPTKTKGGKHADASSSEDEATKKKIAAKELRDKVRQKDSAREIMRERVKEKIRAAVAGARRVRSPSPPRGPTLGDRALSASQRRELIAKDILRAEVDFASTLRAIHDIFAMPLRSTLGSKPIATAPNIRMMFSDIEAVQSVADRLLNELSVRLTTPWGPEAAVADVFCGIVPYLRIFHGYIANISTAARVVRKCEAQSPMFRAFLRQAKERAECRGMSLTEMLMAPLDRIGGYVRQLCDLRHVTPERHPDSMSLDAAIEGFGMLKKFVDETTTSAAAQIRLVELQSAIAECPKIVTPSRKFLFVRSFTEVVPNAVPLVAAEGSGAKADPTRALEYVCVQDVALYVFTDLLILTFRTGGRQPFVPGFKFVDRYLTEVNLADVRITELGDHRGIRHLFGLSHKQQTWFLQSPTAAEKEDFIGMLQLAIKKAPSKAESLNVNVNGNASAHSPTKTPTKKQAGVTTK* # ORIGINAL: g1704.t1 original gene structure, not modified by PASA NODE_1794_length_9213_cov_42.623 AUGUSTUS gene 947 2851 . + . ID=g1704;Name=g1704.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS mRNA 947 2851 . + . ID=g1704.t1;Parent=g1704;Name=g1704.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS exon 947 1054 . + . ID=g1704.t1.exon1;Parent=g1704.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS CDS 947 1054 . + 0 ID=cds.g1704.t1;Parent=g1704.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS exon 1238 2851 . + . ID=g1704.t1.exon2;Parent=g1704.t1 NODE_1794_length_9213_cov_42.623 AUGUSTUS CDS 1238 2851 . + 0 ID=cds.g1704.t1;Parent=g1704.t1 #PROT g1704.t1 g1704 MSRMSIQMVDAQSVLFGQPNESEFTFAKMLADSHKKSLEARSDASADIAAQFAMTQDIIMGGQVQRIAFGNAQPPFSTITNNSNNNNNSNCSSQMSFVQSGLPDQVMQGTVNGISEADFFALQLQHFRRVHQQQQEQLLQHTNAQTQQQQQQKQQQQQQQQQQQQQQQQQQQQQQAQPTSRLALRRRSYSDSALPVPFPQLSMDVLQAYSTGSLDDADISTTTMSTNDIQMGCSVEGAIARQESLRLRGVLARRNAFARRGYVDPLAEEIEELKEKLAVDALSLQLQQQAALACLESAVTAVGAGAAVTCGGQEQPTAMMTVPSAASVGRSTPDHVAARRRMLMGTRSETDLLGVMGRADNYFNIQNGFGSATPARAASMGCVSTTADSFFSSEGERDYSASNDDEPHDEDSDLDSPNQHDEDGEHGTAVEFADASSIHSSEWGANGERLPRQSREERRRTHMASEKVRRRNMQTAMTQLQDSIPNYQNRKANKLDIVVKAVEYVHCLQNLVAKLKVENMELKRAQLISGGLYSGQDRPIDADAPKAPSAKDIVAARLAGKKACAAATVGATA* # PASA_UPDATE: g1706.t1, single gene model update, valid-1, status:[pasa:asmbl_2640,status:12], valid-1 NODE_1794_length_9213_cov_42.623 . gene 7850 9200 . - . ID=g1706;Name=g1706.t1 NODE_1794_length_9213_cov_42.623 . mRNA 7850 9200 . - . ID=g1706.t1;Parent=g1706;Name=g1706.t1 NODE_1794_length_9213_cov_42.623 . exon 8944 9200 . - . ID=g1706.t1.exon1;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . CDS 8944 9200 . - 0 ID=cds.g1706.t1;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . exon 8442 8597 . - . ID=g1706.t1.exon2;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . CDS 8442 8597 . - 1 ID=cds.g1706.t1;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . exon 8110 8314 . - . ID=g1706.t1.exon3;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . CDS 8110 8314 . - 1 ID=cds.g1706.t1;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . exon 7850 7962 . - . ID=g1706.t1.exon4;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . CDS 7930 7962 . - 0 ID=cds.g1706.t1;Parent=g1706.t1 NODE_1794_length_9213_cov_42.623 . three_prime_UTR 7850 7929 . - . ID=g1706.t1.utr3p1;Parent=g1706.t1 #PROT g1706.t1 g1706 MMMMMMMMMMMMMMMMMMMMMFDCITISPQQRVAPPPSEKDAPAAPDMSQAAPKRRSRETAKNGNVSDSESDSDGDYRGSHAAARGRALQPAKKVDSTPQSDDDDAVSEQPRPKRVRRGDAPSDNAVAVASPAAKRGSKRPREAVDENTDNGDVEVAPVRASPRAKRAALATRSAASPKSPESQQSPKAAADEDAEEEADEDDRPKITRRTSRRRV* # PASA_UPDATE: g13032.t1, single gene model update, valid-1, status:[pasa:asmbl_3402,status:3], valid-1 NODE_2060_length_7879_cov_45.6563 . gene 1559 3244 . + . ID=g13032;Name=g13032.t1 NODE_2060_length_7879_cov_45.6563 . mRNA 1559 3244 . + . ID=g13032.t1;Parent=g13032;Name=g13032.t1 NODE_2060_length_7879_cov_45.6563 . five_prime_UTR 1559 1593 . + . ID=g13032.t1.utr5p1;Parent=g13032.t1 NODE_2060_length_7879_cov_45.6563 . exon 1559 3244 . + . ID=g13032.t1.exon1;Parent=g13032.t1 NODE_2060_length_7879_cov_45.6563 . CDS 1594 3198 . + 0 ID=cds.g13032.t1;Parent=g13032.t1 NODE_2060_length_7879_cov_45.6563 . three_prime_UTR 3199 3244 . + . ID=g13032.t1.utr3p1;Parent=g13032.t1 #PROT g13032.t1 g13032 MTFAVGSRAFSAHRISIIYRMHFERMQTARHRTLFFLSCPNSLHPPSVTMTSNGAPPTTDIKMSTRDAILDSVALNNWDAVATALLSADESVKSVPLLQSLATKHDAAGIRRFVHSGRPTQAPAQRPQSTPPSGASGARSNAAGSPRASPESSTASSTASPRKAANTSPRSTPSTTPASSKRASATTPQQPSPASPTSSPSARYRRSHAASSPTSTSTASTPRPSDESPGGYQYNRRRSSPPSPTGREFSSESFTLIGFDLETGGFGAQTHAILSIGLCTEHTTETVLVKPGTLRVEPRALEVNRLSLAECCSDGLDADDALRWMRDFFHVGSRGISGGVASGGTAAHNGASPSLDTSDGNDVAASSSVRTSPRESAHASVATVSAGADDDITASSSNGISGGSGAESETTNVSGAVRPAIVLVAHNAGFDVNFLRGTLGRCENDMRNVFDSVDLWYVDTLELVAKYRSDMHPYRSQKLTDILGVLKAKGVDGLPSGRSHEAGFDAAVALFLFRHYWGDSAHETIRRHAKPVLL* # PASA_UPDATE: g13033.t1, single gene model update, valid-1, status:[pasa:asmbl_3403,status:12], valid-1 NODE_2060_length_7879_cov_45.6563 . gene 4152 6724 . - . ID=g13033;Name=g13033.t1 NODE_2060_length_7879_cov_45.6563 . mRNA 4152 6724 . - . ID=g13033.t1;Parent=g13033;Name=g13033.t1 NODE_2060_length_7879_cov_45.6563 . five_prime_UTR 6615 6724 . - . ID=g13033.t1.utr5p1;Parent=g13033.t1 NODE_2060_length_7879_cov_45.6563 . exon 4152 6724 . - . ID=g13033.t1.exon1;Parent=g13033.t1 NODE_2060_length_7879_cov_45.6563 . CDS 4152 6614 . - 0 ID=cds.g13033.t1;Parent=g13033.t1 #PROT g13033.t1 g13033 MPPDLANLVPIVEKYADWYGKAQLYVGSVEEQRKHFGIAHLRAPLPLGMTAQGRPAFNSLFLPPFGDVAYDLALLIKAQARLQSPDVFGLFGASGSGKTKTFYSLADTAVVGAPCSVLTIYNAFGDKRHPALLVLQKELAVFVGDVARGVRGVEERALDLVRLYIASFAVWTLAVQQKVSPANADERRKLWLLCLENRWGQMGVTAAFESLVAWWMNLRDEVVKEYYRQVFDELRAFADECGEPLVVAFDEIGATAGIAPGVWIHLDDYKQHRQNADDVAERRLQEASGEFHECGGGDAQPADLLYALRLLMLGLSDRGILAAFADTDYSLAILRDIGRRSPINGRLKPVKTFSAATDERMRDVLSYYFGIDPPAGALELFCGRPAFFARNLLGGLFATRCGSDSAEWFRRARESALSTSKDDVKRLIIRISRRSHVIYTNFVGSLQCAAVFTPPDGQSSKSYIALDSKEADYFRSTNLVFAAGDASVYDITTEPLVVDVLRALAYEAEPENDLVMRRLTASLPSNKGHLFEDIIAWTLVRRARQCRAGQPSNHPVLLSTVLEPFLHPGFMFPLALSDVTVSINKVINLVGGDPFETAAEDPYGLCCRVSNLAHADIVFGVDIDGKKGVFAVQCKARKDSVPISKCLASVASGCQYLMSGSDEKNYTKAIRDKTTSLSFATTSRAAFEATLKRHSSLEACWIRCVATVKPPNAKLAELVARHNMTATVREAIVLLNSSEAALGTAAHGELLRLCPDGRTHASQQSRLAKLFNDAWTKDVKSWTVDEVNKKVTRRLQSRKMATSEERMERLSISNKGDDDE* # PASA_UPDATE: g13031.t1, single gene model update, valid-1, status:[pasa:asmbl_3404,status:12], valid-1 NODE_2060_length_7879_cov_45.6563 . gene 238 1111 . - . ID=g13031;Name=g13031.t1 NODE_2060_length_7879_cov_45.6563 . mRNA 238 1111 . - . ID=g13031.t1;Parent=g13031;Name=g13031.t1 NODE_2060_length_7879_cov_45.6563 . five_prime_UTR 1086 1111 . - . ID=g13031.t1.utr5p1;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . exon 848 1111 . - . ID=g13031.t1.exon1;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . CDS 848 1085 . - 0 ID=cds.g13031.t1;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . exon 573 660 . - . ID=g13031.t1.exon2;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . CDS 573 660 . - 2 ID=cds.g13031.t1;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . exon 238 376 . - . ID=g13031.t1.exon3;Parent=g13031.t1 NODE_2060_length_7879_cov_45.6563 . CDS 238 376 . - 1 ID=cds.g13031.t1;Parent=g13031.t1;3_prime_partial=true #PROT g13031.t1 g13031 MASSLGTPPHPATKLRGERQSLVWLFFVYILSVGISIYHFVLNTVFPRRPMRKKLQDAMRGATDYSEWFVAAWSLDKLEGNESWKLRPESHHYDSEMIETRLVHMRLARRGGDYDAMLFQLRAGLTRSIGGIDNPLLYTRCFVGSKKLVEQYIDE # PASA_UPDATE: g2506.t1, single gene model update, valid-1, status:[pasa:asmbl_7458,status:3], valid-1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . gene 16263 18426 . + . ID=g2506;Name=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . mRNA 16263 18426 . + . ID=g2506.t1;Parent=g2506;Name=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . five_prime_UTR 16263 16327 . + . ID=g2506.t1.utr5p1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 16263 16394 . + . ID=g2506.t1.exon1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 16328 16394 . + 0 ID=cds.g2506.t1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 16689 16978 . + . ID=g2506.t1.exon2;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 16689 16978 . + 2 ID=cds.g2506.t1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 17465 17627 . + . ID=g2506.t1.exon3;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 17465 17627 . + 0 ID=cds.g2506.t1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 17982 18426 . + . ID=g2506.t1.exon4;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 17982 18250 . + 2 ID=cds.g2506.t1;Parent=g2506.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . three_prime_UTR 18251 18426 . + . ID=g2506.t1.utr3p1;Parent=g2506.t1 #PROT g2506.t1 g2506 MSHSPLSAVVAIGILLSMNTLQAEASPNVVGTQRVDITCLATQAGAFSEGSVYENDWNNAVSLSCKVIKDDSSELLTCTGRVIAQRKEHDPHTFGYKFGSAIDTANYILVDAKAWGDVTVAFSTDTDIANAVMDGTLLTHVGLEDTGAGPATSGTASLESIFCRAQLQTLAIKPPSPACIENVADTSLSCYHVNGFNLISVPSQTANAVVGSCDPNKTYSSISDEFSDCECATPGFKPVSGEAGGTTYLFCPTRGDGKNDFK* # ORIGINAL: g2501.t1 original gene structure, not modified by PASA NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS gene 4841 5173 . - . ID=g2501;Name=g2501.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS mRNA 4841 5173 . - . ID=g2501.t1;Parent=g2501;Name=g2501.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS exon 4841 5173 . - . ID=g2501.t1.exon1;Parent=g2501.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS CDS 4841 5173 . - 0 ID=cds.g2501.t1;Parent=g2501.t1 #PROT g2501.t1 g2501 MVSKTVLGKDRMIKTVSWCRRLCWGQGQNDHNRQSHGLGDCVGGNDRMIKTDSLIFSKTVSGQGQNGQDGQSHDLEDCVGKDRMVKTDSLMVTKTVLGKDRLIKTDSLLG* # ORIGINAL: g2504.t1 original gene structure, not modified by PASA NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS gene 13688 14441 . - . ID=g2504;Name=g2504.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS mRNA 13688 14441 . - . ID=g2504.t1;Parent=g2504;Name=g2504.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS exon 14242 14441 . - . ID=g2504.t1.exon1;Parent=g2504.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS CDS 14242 14441 . - 0 ID=cds.g2504.t1;Parent=g2504.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS exon 13688 14087 . - . ID=g2504.t1.exon2;Parent=g2504.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS CDS 13688 14087 . - 1 ID=cds.g2504.t1;Parent=g2504.t1 #PROT g2504.t1 g2504 MGYTEPAERKSSVFITSASTDDKMSFHVTFDDIVFNNHAEHILFAEWLKLKFQSDHAKLVQFVDWSVWRSVVGLPTSAAKPKEPQTDGSAKKTTKQSTHTWLEPALWMLNKPDAFEIADINGQYVNLRRISATSHCRVRQRVHENLGHFAELQRENKHVLPHVLSSARQVDTADSRMMNLDRLMQQGSAPCTTVTVSRS* # ORIGINAL: g2505.t1 original gene structure, not modified by PASA NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS gene 15120 15569 . + . ID=g2505;Name=g2505.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS mRNA 15120 15569 . + . ID=g2505.t1;Parent=g2505;Name=g2505.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS exon 15120 15569 . + . ID=g2505.t1.exon1;Parent=g2505.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS CDS 15120 15569 . + 0 ID=cds.g2505.t1;Parent=g2505.t1 #PROT g2505.t1 g2505 MLEFPSTGSPSLYDRLVKYGAWYLSALTPPEPQIAGGRKLVALGDGSTYSSSVGAVVATFLRRLYGPTSIRGNELQWSWLEQQTALSPLVYDSGWAPTFFLIDPDVKPMRPALAGADFPGYWTSLRQSPHTPYETAAWLIKGPFYIDHR* # PASA_UPDATE: g2502.t1, single gene model update, valid-1, status:[pasa:asmbl_7457,status:12], valid-1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . gene 7626 9296 . + . ID=g2502;Name=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . mRNA 7626 9296 . + . ID=g2502.t1;Parent=g2502;Name=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . five_prime_UTR 7626 7653 . + . ID=g2502.t1.utr5p1;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 7626 8042 . + . ID=g2502.t1.exon1;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 7654 8042 . + 0 ID=cds.g2502.t1;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 8121 9055 . + . ID=g2502.t1.exon2;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 8121 9055 . + 1 ID=cds.g2502.t1;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . exon 9156 9296 . + . ID=g2502.t1.exon3;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . CDS 9156 9277 . + 2 ID=cds.g2502.t1;Parent=g2502.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant . three_prime_UTR 9278 9296 . + . ID=g2502.t1.utr3p1;Parent=g2502.t1 #PROT g2502.t1 g2502 MACCNDVQAAAESGHIACLTALRDSGVDITISFRLRASTVTAEVDINFEGSFFLSYTHTGSYEDRTAFHSACAFGHIDLCCWLVQNGFGIDAKCDSVTPLFLAVNYKRHDIVSWLLETGADPNAQAPMHHSQPGFRTAREFIRGITPILIASVLGDLVSVRLLLSHGADPSLGMWCYSTDRRYYDLIPIVGALECGQDDVVYALLEAGANIHADGVLNALLARDSVDMMKHFLRAGIAFENPSVFSFYFQPSSYDMCLHLIENVGGFVRSQMGCYVVYSTVAKMDTKAASDLIDAYLRNGGQIDYPVGAGQGRTFWTMLSLSIHEQSVEIVRLLLSAYGASPNVHADYVNVCVQALLLRSCIAEAHQLVNIFLLLVRFGLELSRIVIVKVIGINASAPLRAAASPLFAELAYLSEIRHSWQFGRWAAIFRICGAAGFIPLTGPSLQLLCRRTILANDLVDVGRKVLPAHLVDYVAVSLDIQ* # ORIGINAL: g2503.t1 original gene structure, not modified by PASA NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS gene 12360 13220 . - . ID=g2503;Name=g2503.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS mRNA 12360 13220 . - . ID=g2503.t1;Parent=g2503;Name=g2503.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS exon 12360 13220 . - . ID=g2503.t1.exon1;Parent=g2503.t1 NODE_459_length_23322_cov_20.6759_potentialcontaminant AUGUSTUS CDS 12360 13220 . - 0 ID=cds.g2503.t1;Parent=g2503.t1 #PROT g2503.t1 g2503 MEPATTGSSDFRENAATWAMRRKERHQRLSAVTLDGVCELIAGCGPSSVVVLFGAGVSTSAGIQDFRSPAGAYNDATFSERYGCSAQDLFDGSSRRTHAGSLARFQAALKEAVEQIAARQSLPAAHQFLRDLHSAGKLRRVYTQNVDGLEKEVAGVPDELVVQMHGSVHGAGGIVLYGEPVRASAGQMRADVADASRQPAVLIIAGTTLTTEPAASIPRMLCRHVPRVYINRECPPALLADWKESVARKHRRFVFDRPWNYRDVLYEGDCDAAFERLGAAVRPGHS* # PASA_UPDATE: g9091.t1, single gene model update, valid-1, status:[pasa:asmbl_7413,status:12], valid-1 NODE_4523_length_1506_cov_30.5884 . gene 102 1501 . + . ID=g9091;Name=g9091.t1 NODE_4523_length_1506_cov_30.5884 . mRNA 102 1501 . + . ID=g9091.t1;Parent=g9091;Name=g9091.t1 NODE_4523_length_1506_cov_30.5884 . five_prime_UTR 102 103 . + . ID=g9091.t1.utr5p1;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . exon 102 298 . + . ID=g9091.t1.exon1;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . CDS 104 298 . + 0 ID=cds.g9091.t1;Parent=g9091.t1;5_prime_partial=true NODE_4523_length_1506_cov_30.5884 . exon 546 868 . + . ID=g9091.t1.exon2;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . CDS 546 868 . + 0 ID=cds.g9091.t1;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . exon 981 1501 . + . ID=g9091.t1.exon3;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . CDS 981 1176 . + 1 ID=cds.g9091.t1;Parent=g9091.t1 NODE_4523_length_1506_cov_30.5884 . three_prime_UTR 1177 1501 . + . ID=g9091.t1.utr3p1;Parent=g9091.t1 #PROT g9091.t1 g9091 IVRAHRGSDASENSSRNSHHMGSVNTRKRLMTATMKDRKNKRAFGIDLSELMYIEERTEVPWVVEVLVREIERRGVDVEGLYRVPGRVADMNQMKDVFNKKKATEVPLAKWPETHSVCGVLKQFFRELPDPLLTFELYDDWLDAVVSRQGKERIEALARLVAKLPVEHRSALRYLLRHLRNVVAHASSNKMGAYNVGVVFGPTLMRPREEAGLAAIQNTTKQAIVVESLIDSYDHLF* # ORIGINAL: g14395.t1 original gene structure, not modified by PASA NODE_1997_length_8170_cov_39.3051 AUGUSTUS gene 111 3870 . + . ID=g14395;Name=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS mRNA 111 3870 . + . ID=g14395.t1;Parent=g14395;Name=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 111 915 . + . ID=g14395.t1.exon1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 111 915 . + 0 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 1138 1274 . + . ID=g14395.t1.exon2;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 1138 1274 . + 2 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 1523 1672 . + . ID=g14395.t1.exon3;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 1523 1672 . + 0 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 1891 2086 . + . ID=g14395.t1.exon4;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 1891 2086 . + 0 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 2264 2403 . + . ID=g14395.t1.exon5;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 2264 2403 . + 2 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 2629 2759 . + . ID=g14395.t1.exon6;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 2629 2759 . + 0 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 3030 3133 . + . ID=g14395.t1.exon7;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 3030 3133 . + 1 ID=cds.g14395.t1;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 3344 3870 . + . ID=g14395.t1.exon8;Parent=g14395.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 3344 3870 . + 2 ID=cds.g14395.t1;Parent=g14395.t1 #PROT g14395.t1 g14395 MFLKDYERQRLLEKGAMAFVSDDEDEDNGPARKRKDPTLSYTDEQASLKQKFLAGFNSDEEGDALSDGEGGAGAAAAAGGLLKLRKKTDEEKTKEEEDYRKWLRGEGAAKDKALVSEMESLRRYWTDPNLDKNEKFLRDYVLNKGWADADSGRVPTYGDVVGGEEAVSDTEDEVAVEESEMFERQYNFRFEEPGADQVMSYPRTIDDSVRRKDDKRREKRLERAARKKDEKEQKAQELKRLKSLKQREILEKLKTITEISGHNVLADEGLEVTNEALEKFGGIDLEGDFDPEEHDRKMRELFNDDYYEQGGDDDESFDPRLDDSKLSELVGEDLGDVYDDDAFAGGGEGEGEGELDDAYAPVVEDDAYAPTGEGDDKKKKKKKKKKKKDQGEGDLVVDMDAEFLQDVAPQEGVASKQQPAKKKPAEAVKAPATDLKGRKQNALARALAASKPKFDPTKMSFEKYFDEYYKLDYEDMIGDLPTRFKYRTVPANDFGLGMEEILEADDKELNQWVSLKKTYQYRTEDEERKDAKKYKKVATDTRKKAMVLPSLAKKGLIKNAEGEVVRHSQPKDQRDNSHSHKHRDGDRHHKSGDRGHSGHKHHSHQQQQQQQQQQQQGDKADRKRKRDDAAPVAGAEADVDGGKSKKRKEGGEASETKHSEGSKEAKEAKQSQSQSPAKAKADSKSEGKKEQKGDQPRKWKPKKHSLPAGVSESRLAAYHSVKKSKKHDA* # ORIGINAL: g14396.t1 original gene structure, not modified by PASA NODE_1997_length_8170_cov_39.3051 AUGUSTUS gene 4423 7443 . - . ID=g14396;Name=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS mRNA 4423 7443 . - . ID=g14396.t1;Parent=g14396;Name=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 7344 7443 . - . ID=g14396.t1.exon1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 7344 7443 . - 0 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 6993 7085 . - . ID=g14396.t1.exon2;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 6993 7085 . - 2 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 6732 6829 . - . ID=g14396.t1.exon3;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 6732 6829 . - 2 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 6297 6351 . - . ID=g14396.t1.exon4;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 6297 6351 . - 0 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 5843 6064 . - . ID=g14396.t1.exon5;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 5843 6064 . - 2 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 5601 5676 . - . ID=g14396.t1.exon6;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 5601 5676 . - 2 ID=cds.g14396.t1;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS exon 4423 5446 . - . ID=g14396.t1.exon7;Parent=g14396.t1 NODE_1997_length_8170_cov_39.3051 AUGUSTUS CDS 4423 5446 . - 1 ID=cds.g14396.t1;Parent=g14396.t1 #PROT g14396.t1 g14396 MNAKQGITANPIQENNLFEWEAAIRGPDDSHWEGGVFRVELIFPIDYDLKPPKVYFSTVPFHPNVDMQTGRPCVDFLDDQEQWRPEYDITYILMSLQSTYIQFVHECVAASRRIQLGLPPYEEDQQMQASPHPPPMDDHPGRRRSHNQHHHTSNKEATPARKSAKISYDDYFSLWRGVATSKSHMRDRDVSRGLLTDNSKRAALHDSEVERKVDRHIKIVYGANPFDRSAMKETIVLKRENSAWMRDFYTGGNPLLTNMNMGMSVPGASSTAAPTGFLPPLSIGQNSLVSQGYAAPPPNGRVGHAGTDGGIYVPVAAPVPDSYTGFGYVDDSAAAMYAYPPQSGPPPAHAQNMHERRPSRGSANASPSPSQTHSQSQSRQNSAPSRAREGQQGRESPVVLSRHGSGVQMAAVVGGEGVRIPGPHAALSQTSLAGDVYYATGSAVDVAGSIASQSVASTFDRASMVGVDAPNPSAADFGIDGSDGGPYAPGMESLSVGGLSYARPDSQLSEVSGQSESRQSYVQGRRSVTPLGDGDWENQVDDLVTWTADLDTGGI* # PASA_UPDATE: g8279.t1, single gene model update, valid-1, status:[pasa:asmbl_1585,status:12], valid-1 NODE_1438_length_11287_cov_41.3341 . gene 122 2180 . - . ID=g8279;Name=g8279.t1 NODE_1438_length_11287_cov_41.3341 . mRNA 122 2180 . - . ID=g8279.t1;Parent=g8279;Name=g8279.t1 NODE_1438_length_11287_cov_41.3341 . five_prime_UTR 2119 2180 . - . ID=g8279.t1.utr5p1;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . exon 1852 2180 . - . ID=g8279.t1.exon1;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . CDS 1852 2118 . - 0 ID=cds.g8279.t1;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . exon 1155 1538 . - . ID=g8279.t1.exon2;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . CDS 1155 1538 . - 0 ID=cds.g8279.t1;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . exon 626 805 . - . ID=g8279.t1.exon3;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . CDS 626 805 . - 0 ID=cds.g8279.t1;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . exon 122 278 . - . ID=g8279.t1.exon4;Parent=g8279.t1 NODE_1438_length_11287_cov_41.3341 . CDS 122 278 . - 0 ID=cds.g8279.t1;Parent=g8279.t1;3_prime_partial=true #PROT g8279.t1 g8279 MAGDGISLSFEGKGLKLNTEADAEPIVKAIAAAGGITSIKLSGNTIGVDAAKAIAAALANANAEKPTLVRADLSDIFTGRLLSEIPGALTAFADALKDIPTLVELNVSDNAFGPVGAESLAPLIRANRSIRVLRFNNNGLGIGGGKFLAQALLDAHAQGDYHPTTFVAGRNRLENEGAIALSAAFGKIQSFVEVAMPQNGINHAGIAALADAFKENKDLEIIDLNDNTFTVKGAEAMATALPSLQKLRKINFGDCLIRPAGARAIAKAISSTHAALEEVDFTYGELNDTAVIAVAEALKAKANLRSLQLNGNKVGGDGREAIKKNGLDK # ORIGINAL: g8280.t1 original gene structure, not modified by PASA NODE_1438_length_11287_cov_41.3341 AUGUSTUS gene 2831 3964 . - . ID=g8280;Name=g8280.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS mRNA 2831 3964 . - . ID=g8280.t1;Parent=g8280;Name=g8280.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 2831 3964 . - . ID=g8280.t1.exon1;Parent=g8280.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 2831 3964 . - 0 ID=cds.g8280.t1;Parent=g8280.t1 #PROT g8280.t1 g8280 MAPCQPQVMGGKQSRLPSTSPDGMNTSDPFTGRAGLPQSPLRIQSSAMPIPTRPTSSSPVSDVFVTCGEDGDGFSAQSTCDLFSRSLPETRGTLGFFADELSRAPFSPMKPPGAPSPIRRQSLERSPSVPTGRELLPSSPTSMTEVWIQRTTSPGKLLSRRSSANSSGSVLGLLHPSKSLTGGEGALSFNGTGTSLASRSADACIPTAAQRRKSWAFSGVSSFSLSGMSTGDDGSMSGSETQLISSPSRKDSIQLPRIGENDVLPSPLVIRRTKSLTAAAAAVEGFDNANTQLMRKLSFTTNRPELAGEDIMELSESRPSSAKRHAREHCDNATNVRDSPSPPAGEPCRTDRKPRRRSLSVSDACPSLVPVLDNEAA* # ORIGINAL: g8281.t1 original gene structure, not modified by PASA NODE_1438_length_11287_cov_41.3341 AUGUSTUS gene 5432 10871 . - . ID=g8281;Name=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS mRNA 5432 10871 . - . ID=g8281.t1;Parent=g8281;Name=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 10682 10871 . - . ID=g8281.t1.exon1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 10682 10871 . - 0 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 10335 10543 . - . ID=g8281.t1.exon2;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 10335 10543 . - 2 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 7341 10182 . - . ID=g8281.t1.exon3;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 7341 10182 . - 0 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 7034 7151 . - . ID=g8281.t1.exon4;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 7034 7151 . - 2 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 6747 6867 . - . ID=g8281.t1.exon5;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 6747 6867 . - 1 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 6444 6505 . - . ID=g8281.t1.exon6;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 6444 6505 . - 0 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 6027 6177 . - . ID=g8281.t1.exon7;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 6027 6177 . - 1 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 5697 5790 . - . ID=g8281.t1.exon8;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 5697 5790 . - 0 ID=cds.g8281.t1;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS exon 5432 5556 . - . ID=g8281.t1.exon9;Parent=g8281.t1 NODE_1438_length_11287_cov_41.3341 AUGUSTUS CDS 5432 5556 . - 2 ID=cds.g8281.t1;Parent=g8281.t1 #PROT g8281.t1 g8281 MRLTNNVLPHASCVSVTNSRADRVHTVFAVRQHYTSDALLSSIDDLQILRSILHSFAAIEASDNEERERHAPTDAASNGRPADTHVPLRSASAADLQALAPHRTDSGMSTTDSEGHRTKKAAKGTKKAKGKRKFSERHLTQQCRPSFVAQNARAIDFDAAGEGVVQSSYSPSPDVDVVESSYSPDVDAMLDQNGLDGVHGNGSEHVVSGSDGVLTAAREAAAPSHQLDRPHSTLLSAVLCDTKPIEIGPMENAPFDACAPDAIPSSEDVKVASLTVDHTLPKSASWNCMPSLAAYDGAAISSSSSGQGAVGESASQQRRGSVGADTPSSRAIGRQGSINGASISSGSGLSASLSGALIGPVGDGTRRASSEQRPSSQMDELRDSLLKELRRGVGGVGGDRTFTEYGAHPLSAPQFHAARESLKDAIESGAYSTAPELERENAHFDVCERLVCAMESELWDAAVASLLASDAHVISDDEDGGPLFRVVETDDAPAQRDDGAEGDMFRQMSVDDLYGQGFAGSTSDVEEVEEIVREGAHENPNERSCDAAVDVDGGDGGGCKERESSKGAVLVFGGDASCCDSTGALESLSNAAHAALCEDGAVGTFDCPPTIPGRAMSPPPTATASATVAVSAVDAEKRELVHPMNQAPIQDEAEKVLVTEEVDEYAAVRAAKVDEMTGEDSLSAMSAQQEHAHTPRVERASFSAVVGDAMDALDAAMSATLTLPVSLCSIEEDAAFDSNAFSQAAARDDVHGISEAIAGAMGDETALSPPSVRASALRTAAARSLDDAKAIVSSSSDNRSSSSGSGTRSVVGSKAQAEAARKTLLLPILPVAPRIVRPFGPEDGDVDGDGEASSVSSSPQAKSVQGPRPTSRGSQPASGAGGSYGSSGTRESVESVARQFLLTLGGSQAGGVDEEESGGAGAGAGGGGHKQPQPPPSRRFLVGDCDTPQSLLPLPKNYDDPSTRLALTSPSPSRRAAGAQASDHGGYGGVGGESEGRSGGGGDRLSRPSRDADASPVVGSVGGASGNSLSRPSSRIRGNDEWAPPRPQIIFTVQEKTGRTRDLVAKQNHMCAGCGMSVDPAYTKRFRFCHYTGKFFCPSCHSNQTAALPARVLNKWDFGKYKVSNFGKELLDRLYTEAVFDIAVLNPALYKQVKAMSQAHVVRQKLFYLKDYLVTCRAGERLLAAFVDTPHLYSEPDVYSMKDLYEVYMLTLVPTLDKVAVEMSKHVYKCELCSAKGFICEFCNLSTDVLYPFQLEKAVRCRGCKSFFHVKCFVSDDCPKCARQTRRRTMRSASEAVPYSPTL* # ORIGINAL: g3118.t1 original gene structure, not modified by PASA NODE_6652_length_530_cov_50.9407_potentialcontaminant AUGUSTUS gene 163 391 . + . ID=g3118;Name=g3118.t1 NODE_6652_length_530_cov_50.9407_potentialcontaminant AUGUSTUS mRNA 163 391 . + . ID=g3118.t1;Parent=g3118;Name=g3118.t1 NODE_6652_length_530_cov_50.9407_potentialcontaminant AUGUSTUS exon 163 391 . + . ID=g3118.t1.exon1;Parent=g3118.t1 NODE_6652_length_530_cov_50.9407_potentialcontaminant AUGUSTUS CDS 163 391 . + 1 ID=cds.g3118.t1;Parent=g3118.t1 #PROT g3118.t1 g3118 DVSLLLGLSEEVLVHVVKIGRFTLTDIGHLRATCKPLRNFFDRIRETVHDYVVGDLSTYMLTGTSTLPRRVDISR* # ORIGINAL: g5282.t1 original gene structure, not modified by PASA NODE_3432_length_3475_cov_39.2218 AUGUSTUS gene 507 1670 . + . ID=g5282;Name=g5282.t1 NODE_3432_length_3475_cov_39.2218 AUGUSTUS mRNA 507 1670 . + . ID=g5282.t1;Parent=g5282;Name=g5282.t1 NODE_3432_length_3475_cov_39.2218 AUGUSTUS exon 507 1670 . + . ID=g5282.t1.exon1;Parent=g5282.t1 NODE_3432_length_3475_cov_39.2218 AUGUSTUS CDS 507 1670 . + 0 ID=cds.g5282.t1;Parent=g5282.t1 #PROT g5282.t1 g5282 MTLSRAAVSYLEDLGIANDLRKSGGFHSVDAVDRRQWSNGAIIGCDATPGDASVVHGGLWRALMDALKRTSPLLNYVDIQPGIDLTRCEAADDDIAFSGEQARWRKFAQPLIAADGANSAVRRILLTNYTEHNVFSDVLLWTGCTPGAFSDSRSATSLLCPTGVSVFPTNSAVMVLRRIADDAHWSVACGPTTNIAVMNACASVDGFTSSLGSGIHLHLDNASCERDSGTDLIARSTSVTPSTLAEALSTLGIDNRLADMIRNADVGEPGVRQTPFGCLPIFQRKIKLPSYSYSACAVLVGDAAHPIAPLFSRPLSLALCDVQECVQKLSIMQSRLAQEWLSYYVSRSEVADRASAAATKACELLVRGSDLGSGNSVAQRFFSENPP* # PASA_UPDATE: g12270.t1, single gene model update, valid-1, status:[pasa:asmbl_6208,status:12],[pasa:asmbl_6210,status:12],[pasa:asmbl_6211,status:12], valid-1 NODE_3556_length_3212_cov_39.0045 . gene 244 2155 . - . ID=g12270;Name=g12270.t1 NODE_3556_length_3212_cov_39.0045 . mRNA 244 2155 . - . ID=g12270.t1;Parent=g12270;Name=g12270.t1 NODE_3556_length_3212_cov_39.0045 . five_prime_UTR 2130 2155 . - . ID=g12270.t1.utr5p1;Parent=g12270.t1 NODE_3556_length_3212_cov_39.0045 . exon 605 2155 . - . ID=g12270.t1.exon1;Parent=g12270.t1 NODE_3556_length_3212_cov_39.0045 . CDS 605 2129 . - 0 ID=cds.g12270.t1;Parent=g12270.t1 NODE_3556_length_3212_cov_39.0045 . exon 244 341 . - . ID=g12270.t1.exon2;Parent=g12270.t1 NODE_3556_length_3212_cov_39.0045 . CDS 244 341 . - 2 ID=cds.g12270.t1;Parent=g12270.t1;3_prime_partial=true #PROT g12270.t1 g12270 MERSFDLVLEKDDDDAPIDANAVDDAVNDGIDQEGGEGEVGEEGEDEDGEEEDTDAGVEFVDAANEDANGNEIDGDYADAEMAVADAPDVPDVPTISAGNDALSSLLRMSGIHSSALAIDLAESPALAFPPIALYSNVSAANFPATNLSAIAGSLIDEDAMVRKRQRTDDFDGSGALTAGRANSGNASAPVVVAQAPAMRAPGTIAGKGPGPTGVSGKGRNLGKVQRNDEDDDDDDDEEDEASKKVKKESSDSESEGMQGKGGKPIARRPPSHPMYKAAGTTIPPTAAVGKPTTLPIPTHTLLPTQTPLPTHTATPTHTATPTQRAPSIPAGPVASAVAGVRPTAPPPSHTPPQVLQQNARYVNAQAGGHMAYIPGKGPTVGASQTPPVRTGVPQARPQAGIAHTPHRPAPGTPGYAIGQGQLPSSQATQVRTPIPPAQAQTPSQPAQFIHTGGSSAATPITVPSTPLGTPMHVPQTPQSPQTQHQPHPTVTSQPIYFSRRKRLFGKELPLMMYGFGDDPDPLPETIDMVEDLVVDYITQM # ORIGINAL: g12271.t1 original gene structure, not modified by PASA NODE_3556_length_3212_cov_39.0045 AUGUSTUS gene 2491 3097 . + . ID=g12271;Name=g12271.t1 NODE_3556_length_3212_cov_39.0045 AUGUSTUS mRNA 2491 3097 . + . ID=g12271.t1;Parent=g12271;Name=g12271.t1 NODE_3556_length_3212_cov_39.0045 AUGUSTUS exon 2491 2909 . + . ID=g12271.t1.exon1;Parent=g12271.t1 NODE_3556_length_3212_cov_39.0045 AUGUSTUS CDS 2491 2909 . + 0 ID=cds.g12271.t1;Parent=g12271.t1 NODE_3556_length_3212_cov_39.0045 AUGUSTUS exon 3070 3097 . + . ID=g12271.t1.exon2;Parent=g12271.t1 NODE_3556_length_3212_cov_39.0045 AUGUSTUS CDS 3070 3097 . + 1 ID=cds.g12271.t1;Parent=g12271.t1 #PROT g12271.t1 g12271 MQLVVELPGSRTRCLSLDGTCTTLAQLTIASLKNVVFGVSGIPPQEQRLLCNGRDICGADDDLAFIPKGRCSNVAALGGLDVTDEVVIVKLLLRVCGGKGGFGSLLRSLGAKFAQAKVDNDDACRDLTGRRLRHSRNEKKPAVLVLTS* # PASA_UPDATE: g6318.t1, single gene model update, valid-1, status:[pasa:asmbl_5887,status:12], valid-1 NODE_3317_length_3751_cov_36.0881 . gene 1206 3553 . - . ID=g6318;Name=g6318.t1 NODE_3317_length_3751_cov_36.0881 . mRNA 1206 3553 . - . ID=g6318.t1;Parent=g6318;Name=g6318.t1 NODE_3317_length_3751_cov_36.0881 . five_prime_UTR 3407 3553 . - . ID=g6318.t1.utr5p1;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . exon 3226 3553 . - . ID=g6318.t1.exon1;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . CDS 3226 3406 . - 0 ID=cds.g6318.t1;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . exon 2908 2975 . - . ID=g6318.t1.exon2;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . CDS 2908 2975 . - 2 ID=cds.g6318.t1;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . exon 1206 2680 . - . ID=g6318.t1.exon3;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . CDS 1313 2680 . - 0 ID=cds.g6318.t1;Parent=g6318.t1 NODE_3317_length_3751_cov_36.0881 . three_prime_UTR 1206 1312 . - . ID=g6318.t1.utr3p1;Parent=g6318.t1 #PROT g6318.t1 g6318 MRLAGSSPFEVLANSFAVLYRASTLHDPLRIALNQAVVRVTALSPGAMSRVLAALDGFVPGMNVLEELLKGCPSVAVVLKSHEEFVLDQWLAETNEQYAGERDAMGETEEDLEDHDVVLSRQNTIKSIGDSFVFSDRGFVADPFLLSLAFEGEESRGPGVTRAALAEVCKALVDPAAGLFVSRNGGESLYVNEAAAPKTSPRLYHAFGRMLGFALILNVPLDFNASAMFYRVFLHLDDSLSRSSRVEWLHETDTALVPDPSKKGRYLPKTLDEDNRRAAVAPGSSDGLVGLPLDVDDLKAVDPELHRGLTRYIRDTVLDADTLELLGNPTFSRVVKDANGGTITEELCPGGSSRAVTEENKAEYIRRMVRSVCVDAVRKQFGEMRDGFDVVLPDFLASVAVRHISEKVFERRLCGDADMSVSYFRDRMRYENCSATDRIITDLWSFLESVGPTGLQDFHEFLTGCRRAPAYGFAPIMHGVGDETYIFMTSVDATLTKAALPKTSTCARILILPPYENAEQLRSKLSLAMAACKDFGTD* # PASA_UPDATE: g6317.t1, single gene model update, valid-1, status:[pasa:asmbl_5888,status:12], valid-1 NODE_3317_length_3751_cov_36.0881 . gene 282 984 . + . ID=g6317;Name=g6317.t1 NODE_3317_length_3751_cov_36.0881 . mRNA 282 984 . + . ID=g6317.t1;Parent=g6317;Name=g6317.t1 NODE_3317_length_3751_cov_36.0881 . exon 282 660 . + . ID=g6317.t1.exon1;Parent=g6317.t1 NODE_3317_length_3751_cov_36.0881 . CDS 282 660 . + 0 ID=cds.g6317.t1;Parent=g6317.t1 NODE_3317_length_3751_cov_36.0881 . exon 879 984 . + . ID=g6317.t1.exon2;Parent=g6317.t1 NODE_3317_length_3751_cov_36.0881 . CDS 879 901 . + 2 ID=cds.g6317.t1;Parent=g6317.t1 NODE_3317_length_3751_cov_36.0881 . three_prime_UTR 902 984 . + . ID=g6317.t1.utr3p1;Parent=g6317.t1 #PROT g6317.t1 g6317 MHAIWHVLGCCVYEKPRQFGESSSESDSADDRDGCGHRSCHLKAQRRKQKMLEARNGGVGDESGDGGAGPSSAEGNGACEHQDPDHAHAHAHAHGHGHSHTVRSTQTVTITETAAPLEQPLSLTLSGRSDGPS* # ORIGINAL: g5492.t1 original gene structure, not modified by PASA NODE_5624_length_777_cov_31.0271 AUGUSTUS gene 63 272 . - . ID=g5492;Name=g5492.t1 NODE_5624_length_777_cov_31.0271 AUGUSTUS mRNA 63 272 . - . ID=g5492.t1;Parent=g5492;Name=g5492.t1 NODE_5624_length_777_cov_31.0271 AUGUSTUS exon 63 272 . - . ID=g5492.t1.exon1;Parent=g5492.t1 NODE_5624_length_777_cov_31.0271 AUGUSTUS CDS 63 272 . - 0 ID=cds.g5492.t1;Parent=g5492.t1 #PROT g5492.t1 g5492 MTGLMALVQDRDESVVAESVVVLKKLLQLRPKDHDQIIGKLARLFDEISVPMAKASILWIVGEYSDRIPK # ORIGINAL: g3046.t1 original gene structure, not modified by PASA NODE_4486_length_1553_cov_79.8139_potentialcontaminant AUGUSTUS gene 309 1373 . + . ID=g3046;Name=g3046.t1 NODE_4486_length_1553_cov_79.8139_potentialcontaminant AUGUSTUS mRNA 309 1373 . + . ID=g3046.t1;Parent=g3046;Name=g3046.t1 NODE_4486_length_1553_cov_79.8139_potentialcontaminant AUGUSTUS exon 309 1373 . + . ID=g3046.t1.exon1;Parent=g3046.t1 NODE_4486_length_1553_cov_79.8139_potentialcontaminant AUGUSTUS CDS 309 1373 . + 0 ID=cds.g3046.t1;Parent=g3046.t1 #PROT g3046.t1 g3046 MPCQRIERPLTMRQPFTPSTPLSMLPSADVCNRYVRSVQNVRRGIFRSSSVDQSVRERARRADVEQLVQIHSDAILRVPATQPAPVVTTRGCLMRFAELALGTWRGKEPGVQVSVQLLSNPRALVVCHGHPRVMTALYDTEWYGARERPSGHLIGATVRLALQFTEDKAKFTPSETMRVLSQTWGGRHVHYWAEIDGLDDQGRIVEAKTRLSKPEHLSANIVSATIQSMFAGVDILWFLSHWQGRVVSDDRIPVPVPSPSAPDYMPVVDGTRVSDPVVTSLPRRLPVAMDAIESLYKRLEQAVVRGSHSGHRNSIFHVTIHRSQVTGSDGTAELTFDDGDFTTSHPEYFVKRYN* # ORIGINAL: g12610.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 30140 32646 . - . ID=g12610;Name=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 30140 32646 . - . ID=g12610.t1;Parent=g12610;Name=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 31938 32646 . - . ID=g12610.t1.exon1;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 31938 32646 . - 0 ID=cds.g12610.t1;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 31223 31839 . - . ID=g12610.t1.exon2;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 31223 31839 . - 2 ID=cds.g12610.t1;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 30937 31089 . - . ID=g12610.t1.exon3;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 30937 31089 . - 0 ID=cds.g12610.t1;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 30140 30634 . - . ID=g12610.t1.exon4;Parent=g12610.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 30140 30634 . - 0 ID=cds.g12610.t1;Parent=g12610.t1 #PROT g12610.t1 g12610 MEARNKAAKKRVRTDDEAVTHADAGGSNGRGSKQATDHGNAATGTKKGKLHHSHGEGTQGKRQGKVEAKAQEPPRKKARRDIPVEENEEDEEDEDKDDDDDDVDADEEEMSADGDADDSAEGEASGSVEMDTDTGNVDTSVGNTPHHPVVWQDAPELAPGERASFETLEGKASDKTLQGIRDMGFTHMTEVQRRCIPPLLEGRDLLGAAKTGSGKTLAFLIPAIELMFNLKFMPRNGTGVIIISPTRELSLQTYGVCRDLLKHHTQTFGLVMGGANRKAEADKLQKGVNILIATPGRLLDHLQNTRGFVFKNLQCLIIDEADRILEIGFEEEMRAIIRLLPKSRQTVMFSATQTRNVEDLARVSLKKAPLYIGVDDQRETATAEGLEQGYVVCSAERRFLLLFTFLKKNRDKKMMVFLSSCNSVKFHAELLNYIDLPVLDIHGRQKQQKRTNTFFEFCNAKQGILLCTDVAARGLDIPAVDWIVQFDPPDDPKEYIHRVGRTARGSNSRGRALLFLLPEELAFLRYLKHAKVPLNEYEFPAKKIANVQSQLEKLIEKNYYLHKSAKDAYRSYLQSYASHSHKTIFDVNQLNLQAVARAFGFSVPPSVNLNVHASKEGKVASRGGSGDGYRHDKDADKAKKFKQKALLGGSEGRQFSR* # ORIGINAL: g12612.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 34445 36317 . + . ID=g12612;Name=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 34445 36317 . + . ID=g12612.t1;Parent=g12612;Name=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 34445 34576 . + . ID=g12612.t1.exon1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 34445 34576 . + 0 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 34693 34888 . + . ID=g12612.t1.exon2;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 34693 34888 . + 0 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 35126 35208 . + . ID=g12612.t1.exon3;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 35126 35208 . + 2 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 35333 35457 . + . ID=g12612.t1.exon4;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 35333 35457 . + 0 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 35697 35748 . + . ID=g12612.t1.exon5;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 35697 35748 . + 1 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 35916 36063 . + . ID=g12612.t1.exon6;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 35916 36063 . + 0 ID=cds.g12612.t1;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 36163 36317 . + . ID=g12612.t1.exon7;Parent=g12612.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 36163 36317 . + 2 ID=cds.g12612.t1;Parent=g12612.t1 #PROT g12612.t1 g12612 MVRFAPVSVPFERRLQTLAVIFFLSLQLTISLVTLYLAFTPFFWPFLIPYLVWVYAFDSRTPENGVGRRREWVRRLSVFRYFRDFFPIRLIKSSELDPQRKFIFAFHPHGITVRPMTLSMNFKFPFYRDYLMALGFVDVSARSIRNTLARGPGNACLIVVGGAAEALDARPGTYDLTLIADLVPVFSFGENDVYDQVPNPRGSWLRNLQTKLQRSFGFSMPLIRGRGIFNYDFGILPFRAPITTIIGTPIPLERIEKPTEADIDKAHQLYVESLKGLYDKHKSLLGRDRRSSFTLY* # PASA_UPDATE: g12607.t1, single gene model update, valid-1, status:[pasa:asmbl_6568,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 18798 20030 . + . ID=g12607;Name=g12607.t1 NODE_37_length_55020_cov_43.7131 . mRNA 18798 20030 . + . ID=g12607.t1;Parent=g12607;Name=g12607.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 18798 19018 . + . ID=g12607.t1.utr5p1;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . exon 18798 19111 . + . ID=g12607.t1.exon1;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . CDS 19019 19111 . + 0 ID=cds.g12607.t1;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . exon 19331 19437 . + . ID=g12607.t1.exon2;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . CDS 19331 19437 . + 0 ID=cds.g12607.t1;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . exon 19597 20030 . + . ID=g12607.t1.exon3;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . CDS 19597 19861 . + 1 ID=cds.g12607.t1;Parent=g12607.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 19862 20030 . + . ID=g12607.t1.utr3p1;Parent=g12607.t1 #PROT g12607.t1 g12607 MACLQCSCCEHDYYDVSGARNTVVSYVSGLLFAIGWWLCIDANAVDKHYSRPEYNACGVVSTLALFMINSVTSGHLAGDMYTGGLCAHRMVARTWLFLGFLAAFGGLIGSAWILFGDYVAKEAHHTWPGAAFFLQNLLIFLSAMFMKFGRAEDY* # ORIGINAL: g12603.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 9970 11909 . - . ID=g12603;Name=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 9970 11909 . - . ID=g12603.t1;Parent=g12603;Name=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 11731 11909 . - . ID=g12603.t1.exon1;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 11731 11909 . - 0 ID=cds.g12603.t1;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 11391 11575 . - . ID=g12603.t1.exon2;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 11391 11575 . - 1 ID=cds.g12603.t1;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 10999 11297 . - . ID=g12603.t1.exon3;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 10999 11297 . - 2 ID=cds.g12603.t1;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 10220 10862 . - . ID=g12603.t1.exon4;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 10220 10862 . - 0 ID=cds.g12603.t1;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 9970 10073 . - . ID=g12603.t1.exon5;Parent=g12603.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 9970 10073 . - 2 ID=cds.g12603.t1;Parent=g12603.t1 #PROT g12603.t1 g12603 MAGTHHISGVCCVHLAETVLGNSLDLLFLRNGNLLLQLLTDRFAQAQDPSSTCSNLKDYCGGTFKGIEAQLDYIQGMGFDAIWISPIPDQTAGGYHGYFAHNLYAINSHFGTAQDLKDLVQACHARGMYVMLDVVANHMGYEPSTVGDFSSFVPFNSSSHYHSVCTIANWSNQTEVEYCRLSGLPDLDQSSSYVASTLCAWINDTITTYGIDGIRIDTVPEVHATFWAQYAKAAAVFTMGEVDNGDPAYNAPYQGVLDATLDYPMYWSLRHALQEKGTMAQIQQQLDAESKLFKDIGLLGLFLDNHDNPRFLNINGDTAALLNALAYVLTGTGIPIVYYGTEAGFNGGADPGCREALWPHYGDAQAGSIYAFLKTVNAFRHAQGSALYAAPQVQRYADAQFYAFTRGTIFVAISNVGSSGNLQRTITYHPYAEGTVLVNILNAGDLVTVSGGSFAINIVNGIPKIYHPK* # ORIGINAL: g12617.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 43847 46065 . + . ID=g12617;Name=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 43847 46065 . + . ID=g12617.t1;Parent=g12617;Name=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 43847 43954 . + . ID=g12617.t1.exon1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 43847 43954 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 44190 44276 . + . ID=g12617.t1.exon2;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 44190 44276 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 44398 44465 . + . ID=g12617.t1.exon3;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 44398 44465 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 44601 44665 . + . ID=g12617.t1.exon4;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 44601 44665 . + 1 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 44771 44883 . + . ID=g12617.t1.exon5;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 44771 44883 . + 2 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 44982 45125 . + . ID=g12617.t1.exon6;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 44982 45125 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 45362 45679 . + . ID=g12617.t1.exon7;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 45362 45679 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 45994 46065 . + . ID=g12617.t1.exon8;Parent=g12617.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 45994 46065 . + 0 ID=cds.g12617.t1;Parent=g12617.t1 #PROT g12617.t1 g12617 MAAAMQSAVVADAAVVQVDGNTLEARLLAAIAKYPKGATDDGLSKELPDVSLADRVAAINVLLAQQRLELLKLGTQIVYRTKAAPTANLSGLAMEERLVYQIIQAAGNKGIWTRDLRYQSNLQQTQINKILKVMEGRKMIKAVKSVVASKKKVYMLHELEPDRSLTGGAWYSEQEFESEFVEVLTTYCFKFLAQKRTTADALQEPISRRLASFATPSEVGEHISRLGLSKIDLSPEDIACVLDALVYDGRVDREVMPPPYAPVDAAPLLLPAAQAGTKLYRAGNPLGPATGMLGAPCGVCPGGRPVLRATIHLSYWLQLVLVTD* # PASA_UPDATE: g12609.t1, single gene model update, valid-1, status:[pasa:asmbl_6570,status:12], valid-1 NODE_37_length_55020_cov_43.7131 . gene 27294 29909 . + . ID=g12609;Name=g12609.t1 NODE_37_length_55020_cov_43.7131 . mRNA 27294 29909 . + . ID=g12609.t1;Parent=g12609;Name=g12609.t1 NODE_37_length_55020_cov_43.7131 . exon 27294 28181 . + . ID=g12609.t1.exon1;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . CDS 27294 28181 . + 0 ID=cds.g12609.t1;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . exon 28366 29235 . + . ID=g12609.t1.exon2;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . CDS 28366 29235 . + 0 ID=cds.g12609.t1;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . exon 29354 29420 . + . ID=g12609.t1.exon3;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . CDS 29354 29420 . + 0 ID=cds.g12609.t1;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . exon 29548 29909 . + . ID=g12609.t1.exon4;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . CDS 29548 29873 . + 2 ID=cds.g12609.t1;Parent=g12609.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 29874 29909 . + . ID=g12609.t1.utr3p1;Parent=g12609.t1 #PROT g12609.t1 g12609 MDRLLPAVNRLQDALTLINSPHALDLPQIVVVGSQSSGKSSVLEHIVGRDFLPRGSGIVTRRPLVLQLVAIGAPDRQDAVPVDAADWGEFLHLPGRKFTNFEEIRDEIVRDTDRVTGGRLAISPQPINLKIYSSSVLNLTLVDLPGITKLPVGDQPQDIETQIRDMILSYITQTNAVILAVTPANTDIANSDALKLARLVDPLGKRTLGVLTKMDIMDRGTDASDVLAGRLFASEHGFVGVVNRSQRDIDARLPIADALRAEAEFFEAHPAYKGRSNVGTRCLARKLSTILMTHIQACLPGIRQSIADTMSQAQTDVDACGDAVEGVAEKGHMLLSVISDFCHGFRTAIDGSTAHLPSTELSGGARISFIFHHLFAGAVSSMDPLVGLTDEAIRTVLYNASGSSPALFISSASFEVLIKKQIGRLEQPCIQCVNHVHDELVRIAESLERASGPLQRFGGLRERLHAEVLSFLKAAVGPAKGMASNVIRAEIGYINTAHPDFITGHKALAFIQDKISNAKQLAEQQLSQAGTPNPTPTKGKDGKKAPDAPNSVDGLQGQGSAGGSFFGSFFGRKRAGNDAQQHNVEKPPAVLRPEGSMSEREIVEIEVVKLLMRSYFGIVKKTVQDMVPKSTMLFLVSHAVEQLQSHLVRALYREETFVPLMRENEAITERRAQAVRLVDMLRRADAIVAEAMDSAGIGAGDGAAARPSSGPYTPAR* # PASA_UPDATE: g12611.t1, single gene model update, valid-1, status:[pasa:asmbl_6571,status:12], valid-1 NODE_37_length_55020_cov_43.7131 . gene 32926 33998 . + . ID=g12611;Name=g12611.t1 NODE_37_length_55020_cov_43.7131 . mRNA 32926 33998 . + . ID=g12611.t1;Parent=g12611;Name=g12611.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 32926 32976 . + . ID=g12611.t1.utr5p1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 33061 33080 . + . ID=g12611.t1.utr5p2;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . exon 32926 32976 . + . ID=g12611.t1.exon1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . exon 33061 33119 . + . ID=g12611.t1.exon2;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . CDS 33081 33119 . + 0 ID=cds.g12611.t1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . exon 33468 33494 . + . ID=g12611.t1.exon3;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . CDS 33468 33494 . + 0 ID=cds.g12611.t1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . exon 33676 33738 . + . ID=g12611.t1.exon4;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . CDS 33676 33738 . + 0 ID=cds.g12611.t1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . exon 33855 33998 . + . ID=g12611.t1.exon5;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . CDS 33855 33995 . + 0 ID=cds.g12611.t1;Parent=g12611.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 33996 33998 . + . ID=g12611.t1.utr3p1;Parent=g12611.t1 #PROT g12611.t1 g12611 MATKLQKMMVQPINLIFRYLQSKARIQVWLYEQSNMRIEGRIVGFDEYMNLVLDEAEEIHLKTKTRKSIGRILLKGDNITLLMQAAPPA* # PASA_UPDATE: g12602.t1, single gene model update, valid-1, status:[pasa:asmbl_6565,status:12], valid-1 NODE_37_length_55020_cov_43.7131 . gene 5467 9524 . + . ID=g12602;Name=g12602.t1 NODE_37_length_55020_cov_43.7131 . mRNA 5467 9524 . + . ID=g12602.t1;Parent=g12602;Name=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 5467 5902 . + . ID=g12602.t1.exon1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 5467 5902 . + 0 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 6378 6659 . + . ID=g12602.t1.exon2;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 6378 6659 . + 2 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 6839 6929 . + . ID=g12602.t1.exon3;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 6839 6929 . + 2 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 7134 7223 . + . ID=g12602.t1.exon4;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 7134 7223 . + 1 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 7423 7507 . + . ID=g12602.t1.exon5;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 7423 7507 . + 1 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 7631 7735 . + . ID=g12602.t1.exon6;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 7631 7735 . + 0 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 7885 8033 . + . ID=g12602.t1.exon7;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 7885 8033 . + 0 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 8181 8381 . + . ID=g12602.t1.exon8;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 8181 8381 . + 1 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 8620 8695 . + . ID=g12602.t1.exon9;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 8620 8695 . + 1 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . exon 8856 9524 . + . ID=g12602.t1.exon10;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . CDS 8856 9434 . + 0 ID=cds.g12602.t1;Parent=g12602.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 9435 9524 . + . ID=g12602.t1.utr3p1;Parent=g12602.t1 #PROT g12602.t1 g12602 MGDSAGSALPALAPLARSHTVGGASVLSSADPDSGAASVAHAPPSLAAPPAHFGRTSRVLSRLLLRKSPSEGSVNRASPAEQLADERAAADWETLVPVVDPRLLPKMDAVEDVRLHLFLDRTVRVPRACSFCLGLLWGAGIRVCDGDSCSLATRDQVMTGSHRECACSVTRPRRSGDGTVDDVPSGASSAASAYSAAASASEGGCDGGATTDVSKDGAIVDTPENDQHAADTDSSLPVPVGGVTGLVNEQHLPRTKKRTIVDTIRSTVAKNRARYVTEDFDLDLSYITDKIIGGKDASDIMLNEKHPEKYLIFNLSEKFYDISKFNNQVLDFGWPDHHAPPLEMLFSICMSIDSWLKSDDENVGGKGRTGTVVCCHMIYSRTCDTADEAMELFASRRFVNGKEGGITQPSQKRYVRYFEQIITGELLPTDQGLLLDRIIVNRVPNFDGRGGCRPVLRVYQNFKLLFDSRQKHHGKEVGPRAYTSDMEFMCFDFAPEGLEVTGDILHGSQAKETIFRLQFHTGCVVDYYLKFTKTDLDDAVLEKRFPDDGGVDILFRPPPPTPRHVDIESIIDSYSTATTGSDVTGHVLGGQELTSPDSEDDDFTRYRYSLDTNYSGMGGLSLQLSSALAIARGASKAHEAASLRRAMTASAPSDVVVDAVGVSECACAEDSQTENALPSAASTGGVDDDTETNPFDD* # ORIGINAL: g12605.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 13175 15706 . - . ID=g12605;Name=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 13175 15706 . - . ID=g12605.t1;Parent=g12605;Name=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 15563 15706 . - . ID=g12605.t1.exon1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 15563 15706 . - 0 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 15238 15463 . - . ID=g12605.t1.exon2;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 15238 15463 . - 0 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 14975 15116 . - . ID=g12605.t1.exon3;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 14975 15116 . - 2 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 14803 14864 . - . ID=g12605.t1.exon4;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 14803 14864 . - 1 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 14181 14673 . - . ID=g12605.t1.exon5;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 14181 14673 . - 2 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 13979 14047 . - . ID=g12605.t1.exon6;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 13979 14047 . - 1 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 13573 13806 . - . ID=g12605.t1.exon7;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 13573 13806 . - 1 ID=cds.g12605.t1;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 13175 13412 . - . ID=g12605.t1.exon8;Parent=g12605.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 13175 13412 . - 1 ID=cds.g12605.t1;Parent=g12605.t1 #PROT g12605.t1 g12605 MVNKGGRPYSANLPGRLQRGILRVNCIDCLDRTNAVELMVGKSALAHQLFALGVIDRPLLEFDSDLMRVFEEIYEDHGDTIALQYGGSQAVNKVETYRKIAPWTTHSRDILNTIHRYYNNSFTDADKQAAINLFLGNFVPQDGKANLWDLPTDYFLHFNDPADGYVPPPKSYIKWCTTIPGGENCDTSKPIDNFFIDQDDELDFPSFKPPRVPQPQQHERVSLAAALLTPASPGPFDAASPSRRQSVQSPVVSVQGGGQNGAAVCQGQERLEGLLSPADGQDLGAVEDAASVAIHFAPGVPGEARPSSSSPADDTDAVAQSRPLKPMDCLFEEYYQPQTITCFHEVYAANMTTTERRTHGDMSPFKPRAAIAPKAPQPAPSIGAKKWLMIRKAGNDDADEVFVYRESTGDYVGIGMRRDDDDEDTMGALECTLPTMEGTYGTTILPPPPNDLARYKCHADWCSDASSVTDAMVSIESVYPTAFSRVAEASHRAYAEHARVAREGASVVDEAEVARYAQYTDTEGLSLQLGAHCRA* # ORIGINAL: g12616.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 41877 43408 . - . ID=g12616;Name=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 41877 43408 . - . ID=g12616.t1;Parent=g12616;Name=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 42949 43408 . - . ID=g12616.t1.exon1;Parent=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 42949 43408 . - 0 ID=cds.g12616.t1;Parent=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 42767 42821 . - . ID=g12616.t1.exon2;Parent=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 42767 42821 . - 2 ID=cds.g12616.t1;Parent=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 41877 42618 . - . ID=g12616.t1.exon3;Parent=g12616.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 41877 42618 . - 1 ID=cds.g12616.t1;Parent=g12616.t1 #PROT g12616.t1 g12616 MTAPSAHDGVGADLPTLATFPFVSFRAPLSLIASGEWSFLASECTFYLVGLLTLVHAARYWGHFPWYLWLATVAHGLATEVISYVTPYIDNFWHAQSTVVVFRGRFPLHIACLYPAFIYLSSMAVTRLRLPRIAEPFAVGLCAVIADAPYDILGPKMLWWTWHATDPNIGDRAYHVPWTSYFFHATFSSTLLFAFRGLRRAIGGCRDDGDRAPSAIHELVAVVLTGLLTFPLAVVLQFGPLFHLPNLLLGVSTEPCVWVLFGFYGIAMLRAVVTQGERRLPCRWERDKCSVLVAAALVHFACYATVVCLADPSAVRAVGFHQSAGTTPEDCAQWVPVYPGVEHIRKQPSLCLAEHGEPFVVADGHTPARGSQWYALAGTLYVNYGEHAFVVLAICTLGLSAFCTMLRSSDGKKAGKDE* # PASA_UPDATE: g12601.t1, single gene model update, valid-1, status:[pasa:asmbl_6573,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 1711 4920 . - . ID=g12601;Name=g12601.t1 NODE_37_length_55020_cov_43.7131 . mRNA 1711 4920 . - . ID=g12601.t1;Parent=g12601;Name=g12601.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 4781 4920 . - . ID=g12601.t1.utr5p1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 4639 4920 . - . ID=g12601.t1.exon1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 4639 4780 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 4342 4499 . - . ID=g12601.t1.exon2;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 4342 4499 . - 2 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 4035 4215 . - . ID=g12601.t1.exon3;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 4035 4215 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 3755 3891 . - . ID=g12601.t1.exon4;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 3755 3891 . - 2 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 3574 3635 . - . ID=g12601.t1.exon5;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 3574 3635 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 3422 3476 . - . ID=g12601.t1.exon6;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 3422 3476 . - 1 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 3233 3298 . - . ID=g12601.t1.exon7;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 3233 3298 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 2898 2987 . - . ID=g12601.t1.exon8;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 2898 2987 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 2627 2747 . - . ID=g12601.t1.exon9;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 2627 2747 . - 0 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 2325 2474 . - . ID=g12601.t1.exon10;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 2325 2474 . - 2 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 2063 2164 . - . ID=g12601.t1.exon11;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 2063 2164 . - 2 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . exon 1711 1803 . - . ID=g12601.t1.exon12;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . CDS 1781 1803 . - 2 ID=cds.g12601.t1;Parent=g12601.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 1711 1780 . - . ID=g12601.t1.utr3p1;Parent=g12601.t1 #PROT g12601.t1 g12601 MPAVDDIGEDAGRPVTGADDEFPELLRQFYDRIFPAKKFYRWLSYGNVDKDYFCNREFSFTLKDDIYIRYLSFADHVEFKQELKKRAPYKIDIGAKYNVKPKNHKTIKSTEFVPQERELVFDIDMTDYDEVRTCCTGADICGKCWPFMTAALEVVDGALRGDFGFKHLLWVYSGRRGIHCWVCDKNARTLNAEGRAAIAEYLTVVRGGDGKAKKSMFYGNEIHPSLQRASNILHDHFDSVIVRDQGHFDTPERWEKVLQLVGDEELKARLKDAFASCHSGEERWQLLRREVDDTKIKSLRFCEEEIVFQHMYPRLDVNVSKGLNHLLKSPFCVHPKTGRVCVPLDVQNIRSFDPFAVPTVTDLLNELDSASADVAESTMDETATLTVGVEQTSLRTAMDVFNRFVRGLEESVREERLKHQQGIDQMSW* # PASA_UPDATE: g12604.t1, single gene model update, valid-1, status:[pasa:asmbl_6567,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 12335 13123 . + . ID=g12604;Name=g12604.t1 NODE_37_length_55020_cov_43.7131 . mRNA 12335 13123 . + . ID=g12604.t1;Parent=g12604;Name=g12604.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 12335 12437 . + . ID=g12604.t1.utr5p1;Parent=g12604.t1 NODE_37_length_55020_cov_43.7131 . exon 12335 12546 . + . ID=g12604.t1.exon1;Parent=g12604.t1 NODE_37_length_55020_cov_43.7131 . CDS 12438 12546 . + 0 ID=cds.g12604.t1;Parent=g12604.t1 NODE_37_length_55020_cov_43.7131 . exon 12634 13123 . + . ID=g12604.t1.exon2;Parent=g12604.t1 NODE_37_length_55020_cov_43.7131 . CDS 12634 13067 . + 2 ID=cds.g12604.t1;Parent=g12604.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 13068 13123 . + . ID=g12604.t1.utr3p1;Parent=g12604.t1 #PROT g12604.t1 g12604 MSCVGTEMGWTDRLADDGEVLISLDRVPNEVASLIFAYLNPDSLAAVARTGRRWRSIVYSNDSFLWRRHCTAHDWRKEMLISREIVFCGIAFAAASLMSVSTVNTADEGCSLARYSNDIDASVRSVTWRMVYSANRTRLNSWYRGDVGRSGRYEDLPCGHFVALSSDGWGHLLTALESTS* # ORIGINAL: g12606.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 16052 18586 . - . ID=g12606;Name=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 16052 18586 . - . ID=g12606.t1;Parent=g12606;Name=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 18428 18586 . - . ID=g12606.t1.exon1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 18428 18586 . - 0 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 17918 18122 . - . ID=g12606.t1.exon2;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 17918 18122 . - 0 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 17648 17807 . - . ID=g12606.t1.exon3;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 17648 17807 . - 2 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 17234 17478 . - . ID=g12606.t1.exon4;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 17234 17478 . - 1 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 16963 17063 . - . ID=g12606.t1.exon5;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 16963 17063 . - 2 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 16686 16848 . - . ID=g12606.t1.exon6;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 16686 16848 . - 0 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 16475 16572 . - . ID=g12606.t1.exon7;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 16475 16572 . - 2 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 16321 16357 . - . ID=g12606.t1.exon8;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 16321 16357 . - 0 ID=cds.g12606.t1;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 16052 16095 . - . ID=g12606.t1.exon9;Parent=g12606.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 16052 16095 . - 2 ID=cds.g12606.t1;Parent=g12606.t1 #PROT g12606.t1 g12606 MDYLGEGGGGLAGSGDETCRSPAQCLRQVCTESLALNPVTPALQKVVVYETKSRIYVVGSDQNEYRFRVLKIDRTDLRHLDVVDDNAEYSKREIQDLLLMIDDGNKGYGGLHRTISAFGIIGFIRFHEGFYMVLATKRRRVAQIGGHFVYKVEDTALVSVAHPSTRTQRHPDEARYLRIFQNVDLSSNFYFSHTYDISHTFQHNVLTHSRPRRPKLPGLAACNPMFVWNHHLLAGIADKVHPDWILPITHGFVAQAHVSVYGKPIYLTVIARRSRQFAGTRFLKRGTNDQGYVANDVETEQIVYDASRLAHDSGRFTSFVQMRGSIPLFWSQDHSGMIPKPPIMIDRLDPFYTATGRHFDDMSARYGTPIIVLNLVKRKEKKPRESILALSFGLYVVNVRGVF* # PASA_UPDATE: g12613.t1, single gene model update, valid-1, status:[pasa:asmbl_6574,status:12], valid-1 NODE_37_length_55020_cov_43.7131 . gene 36226 37946 . - . ID=g12613;Name=g12613.t1 NODE_37_length_55020_cov_43.7131 . mRNA 36226 37946 . - . ID=g12613.t1;Parent=g12613;Name=g12613.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 37686 37946 . - . ID=g12613.t1.utr5p1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . exon 37216 37946 . - . ID=g12613.t1.exon1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . CDS 37216 37685 . - 0 ID=cds.g12613.t1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . exon 36930 37095 . - . ID=g12613.t1.exon2;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . CDS 36930 37095 . - 1 ID=cds.g12613.t1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . exon 36673 36825 . - . ID=g12613.t1.exon3;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . CDS 36673 36825 . - 0 ID=cds.g12613.t1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . exon 36226 36583 . - . ID=g12613.t1.exon4;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . CDS 36440 36583 . - 0 ID=cds.g12613.t1;Parent=g12613.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 36226 36439 . - . ID=g12613.t1.utr3p1;Parent=g12613.t1 #PROT g12613.t1 g12613 MAAHGRSITGAVRMAQHYIRLTRSDRRRPTYSESQRDVGLDAWLRKKDRCIARPEAHFCLPETFSRRYLDGLRTYCGQALTRGATERFSYHPEGPDNGEGRMRGVPVQSAWTASRLTYMHDPSVAFEQPPAAAGGGEQKDSPQPTPVDDAEAERRKREKDRLNTDLAVVLSTLRSGLPLFFSSPVDYGIFCEDVILRENLNGISIRGLGKYKCAMRAFKVGVRLSLANPRFEVLNIGKSAEKHSVRVRWRVVGLPWLFPWREKVYVDAYSELFVNRKTGRVSVHVVDRIIPAEEALFARRLADSGVMGAM* # ORIGINAL: g12615.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 40214 41762 . + . ID=g12615;Name=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 40214 41762 . + . ID=g12615.t1;Parent=g12615;Name=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 40214 40662 . + . ID=g12615.t1.exon1;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 40214 40662 . + 0 ID=cds.g12615.t1;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 40821 40929 . + . ID=g12615.t1.exon2;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 40821 40929 . + 1 ID=cds.g12615.t1;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 41300 41452 . + . ID=g12615.t1.exon3;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 41300 41452 . + 0 ID=cds.g12615.t1;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 41652 41762 . + . ID=g12615.t1.exon4;Parent=g12615.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 41652 41762 . + 0 ID=cds.g12615.t1;Parent=g12615.t1 #PROT g12615.t1 g12615 MAAPVSAAADPMQSSIDAVWLWALQLRPTVDVASPLAPACLSFALYTAFCVPFLIIEFTRPKWALAYKVQPVSWLRDVQFPYRHERLLSAYSSCCATPSLFPSQNVRVTVADLRKCLSNLAMNELFFVFPLSALKYLDEPELLPTAGPRARDLFFHIAGALFVFDLLFYVSHRLLHTRFLYKHVHYRFIFGMHPMTECVWIALITWTSVEHHCGYDMPLLFDFTRLTGGFYAGSRWHDWHHRKPNSNYGAMFSYLDRIFGSMYVDPKSDKLRD* # PASA_UPDATE: g12614.t1, single gene model update, valid-1, status:[pasa:asmbl_6575,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 38229 39989 . - . ID=g12614;Name=g12614.t1 NODE_37_length_55020_cov_43.7131 . mRNA 38229 39989 . - . ID=g12614.t1;Parent=g12614;Name=g12614.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 39925 39989 . - . ID=g12614.t1.utr5p1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . exon 39759 39989 . - . ID=g12614.t1.exon1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . CDS 39759 39924 . - 0 ID=cds.g12614.t1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . exon 39494 39637 . - . ID=g12614.t1.exon2;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . CDS 39494 39637 . - 2 ID=cds.g12614.t1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . exon 38928 39298 . - . ID=g12614.t1.exon3;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . CDS 38928 39298 . - 2 ID=cds.g12614.t1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . exon 38229 38775 . - . ID=g12614.t1.exon4;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . CDS 38587 38775 . - 0 ID=cds.g12614.t1;Parent=g12614.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 38229 38586 . - . ID=g12614.t1.utr3p1;Parent=g12614.t1 #PROT g12614.t1 g12614 MAPTGASVGPSVCGGGILASLVSGKEPFSQCIVRDSAHHSGRAFIAGTVRAMCAAGRIVQVCSLEWYEPLGCEHAVLDLRSLFAELTPEQLAVAFTGPALPANGIVVVDSLSPLLFMYSHAVIARFLRALSVRGELSVVALVHDDCHPRTDVAVVEYGASSVVVLLPVHGFQGGCGVHVTHRRRTGKILVNTHHYTFAASGCLTIDSEQTFVGVRPVDADGTNGSGRSASMAADIPFRLSLSAAERAARSRVVLPYTRAQQSAQTNSSDTGVGDDLVDGDDDPDDDLDV* # PASA_UPDATE: g12619.t1, single gene model update, valid-1, status:[pasa:asmbl_6572,status:12], valid-1 NODE_37_length_55020_cov_43.7131 . gene 48290 50104 . + . ID=g12619;Name=g12619.t1 NODE_37_length_55020_cov_43.7131 . mRNA 48290 50104 . + . ID=g12619.t1;Parent=g12619;Name=g12619.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 48290 48327 . + . ID=g12619.t1.utr5p1;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . exon 48290 48570 . + . ID=g12619.t1.exon1;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . CDS 48328 48570 . + 0 ID=cds.g12619.t1;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . exon 48757 49162 . + . ID=g12619.t1.exon2;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . CDS 48757 49162 . + 0 ID=cds.g12619.t1;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . exon 49367 50104 . + . ID=g12619.t1.exon3;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . CDS 49367 49998 . + 2 ID=cds.g12619.t1;Parent=g12619.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 49999 50104 . + . ID=g12619.t1.utr3p1;Parent=g12619.t1 #PROT g12619.t1 g12619 MYSLFVATAAVVLAASLVLSGTAASGHGDGDAKVLFEFRSVDYEWKDGERDEWLRTGAYVPENNAITGIKAWGDGSDADVQYFVTVPRWREGVPSTLNIIVPNPTGNSSAAHVLRPWPSWEYQTIGDPDAIQYAQSMEIDAFGRMWVIDAGRRNFLEKDSAKVVNGPPKLFLFDVRTRALLSVFVFPNAVAPWNSSFLNDIVVDPSGDVAFISDAGARGGLIAYRLSTNTARRLDDDSTHVELSATAFEINGENYTFTTPSDGIALHPSGRTLYYCALSGYHLYSLDARVFGDMSTPIEAVLRTIRNVGRKQSQSDGLVFSNKGVLYFGGLQTDTVYAWHPSSGVDPRTGELRHQHSLVSNTEKLEWVDTFGFDGRGALLLTSNRLQTFFTGAVDLSQINYRIVSVDVGALSYVVGSDESDSNTPE* # ORIGINAL: g12618.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 46329 48007 . - . ID=g12618;Name=g12618.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 46329 48007 . - . ID=g12618.t1;Parent=g12618;Name=g12618.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 46622 48007 . - . ID=g12618.t1.exon1;Parent=g12618.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 46622 48007 . - 0 ID=cds.g12618.t1;Parent=g12618.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 46329 46466 . - . ID=g12618.t1.exon2;Parent=g12618.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 46329 46466 . - 0 ID=cds.g12618.t1;Parent=g12618.t1 #PROT g12618.t1 g12618 MANDSRNPILNPLGTLEMEKISGLGLRCARLLPRVRWPGNAGPVGHGSIGGTRCMGTSTHVHDGRPQRDLPQTAPTPHPIGATEARMGVESDAARHSGLGTLIARLSAKQTRRGVNGTSSDNLRFDADGNVIEKATGCGQGGAVTSKDAKKSLLAMTHEELVAEMAGLGEPKYRADQVVTAVYSNRTRSIEGFANLSRQLRATLATAFTLEMPTVVDARLSAVDGTAKFVLDMPGGGRIETVFIPTEKTDVRGGAATSAVAGTVCVSSQVGCSLRCVFCHTGTMDKAALRNLTAAEIISQVLIAGDLYPSLTGGVPARVTNVVFMGMGEPLYNYRAVSRAVAVLTDPAGLGISRRRITVSTSGIVPLIERVGKELNVRLAISLHAATNDQRDHLVPINKTYPLADLMEACRKYSASGPVRKITFEYVLLSGVNDSFEDAGNLGRLLNGDSCLLNIIPFNTWEGTEFKEPSRNSVFGFAKEMERFGNIETTVRWPRGRDIMAACGQLK* # ORIGINAL: g12620.t1 original gene structure, not modified by PASA NODE_37_length_55020_cov_43.7131 AUGUSTUS gene 50874 54426 . - . ID=g12620;Name=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS mRNA 50874 54426 . - . ID=g12620.t1;Parent=g12620;Name=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 54261 54426 . - . ID=g12620.t1.exon1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 54261 54426 . - 0 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 53789 54144 . - . ID=g12620.t1.exon2;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 53789 54144 . - 2 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 53548 53638 . - . ID=g12620.t1.exon3;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 53548 53638 . - 0 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 53060 53188 . - . ID=g12620.t1.exon4;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 53060 53188 . - 2 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 52814 52922 . - . ID=g12620.t1.exon5;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 52814 52922 . - 2 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 52275 52642 . - . ID=g12620.t1.exon6;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 52275 52642 . - 1 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 51931 51998 . - . ID=g12620.t1.exon7;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 51931 51998 . - 2 ID=cds.g12620.t1;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS exon 50874 51713 . - . ID=g12620.t1.exon8;Parent=g12620.t1 NODE_37_length_55020_cov_43.7131 AUGUSTUS CDS 50874 51713 . - 0 ID=cds.g12620.t1;Parent=g12620.t1 #PROT g12620.t1 g12620 MSSVLKRIPGALRGRWQQYDELHDNAAGEDEDPAPADGGDGRDDAGGIELARLEQGQCAPLTGDDDRETLRRNTHVMRRFDGVAHMELRVNNLSADFSDSNDHGIDGESGVGAAGDGADDDGSDEYDGDNDETRLAGGDATPAQRLGACGACALLFSREGLAEVLELGSLAWPVVVTVLLQMILTVLSILFVGHIGNQVALDATVAVLFTNVTGVSVGTGLATAVDTLCSQAYGAKNFKRMNVAFMKGCLIMALACLPLWSLWINTGLLLKLAGQDHDVAVLAGDYSRVIIPKLPADFFYILLQRYLQAQRIVKPIILVELAAVMVHALALYLLIFVAKIGFLGAAWASIISSYSLAFAMLAYALLSPSVRSTWTGLSRAALCDWGEYLRLGLPGMLMVCLEWWAFEIVQLMAGFLGRAELGAQAIMTQPRQLNLTLDPSFLTKVGNTLFMVPLGIGIAVSIAVGNRLGANDALGARRAAIAAYAIAWTWILISASLVLGLRAQIPFIFTSDPDIVAVAAGAFPVVALFQGFDATQAISSGIMRGTGQQRIGAIVNLFCFYVVALPTAGLLAFRAHLSVRGLWGGVSCGLAVQAAILLSIVIRTHWEERATSASAHAKQEIQETARAGPSSAATASSLEVGVVTSDDQVVHPAAPATPRRPSFLARQLSVMSAAMDHRSKTTRGILIYLAVFVPGLVASVVVHLKVGR* # PASA_UPDATE: g12600.t1, single gene model update, valid-1, status:[pasa:asmbl_6566,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 362 1733 . + . ID=g12600;Name=g12600.t1 NODE_37_length_55020_cov_43.7131 . mRNA 362 1733 . + . ID=g12600.t1;Parent=g12600;Name=g12600.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 362 464 . + . ID=g12600.t1.utr5p1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . exon 362 651 . + . ID=g12600.t1.exon1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . CDS 465 651 . + 0 ID=cds.g12600.t1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . exon 842 988 . + . ID=g12600.t1.exon2;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . CDS 842 988 . + 2 ID=cds.g12600.t1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . exon 1096 1265 . + . ID=g12600.t1.exon3;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . CDS 1096 1265 . + 2 ID=cds.g12600.t1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . exon 1385 1733 . + . ID=g12600.t1.exon4;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . CDS 1385 1630 . + 0 ID=cds.g12600.t1;Parent=g12600.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 1631 1733 . + . ID=g12600.t1.utr3p1;Parent=g12600.t1 #PROT g12600.t1 g12600 MPVLLEVPVDSVESARAAAEGGAGRIELCAALSEGGLTPSLGCAAAVKAAVRVPVFAMIRPRAGDFLYSDEEFEIMKRDVEYLKGAGVDGFVFGMLTFDGRIDEERCCELLHLMQPLPVTFHRAFDVLADPFLALERLIVLGFDRVLTSGQDSTALEGLPLLAALVRAAGDRIVVVPGGGVSERNIERIVQGCSPQEIHASCRHTVPSGMAHRNGTVHMGGAVYPVHEYSLSVTSTDRIRSILAIAESL* # PASA_UPDATE: g12608.t1, single gene model update, valid-1, status:[pasa:asmbl_6569,status:3], valid-1 NODE_37_length_55020_cov_43.7131 . gene 20129 26336 . + . ID=g12608;Name=g12608.t1 NODE_37_length_55020_cov_43.7131 . mRNA 20129 26336 . + . ID=g12608.t1;Parent=g12608;Name=g12608.t1 NODE_37_length_55020_cov_43.7131 . five_prime_UTR 20129 20436 . + . ID=g12608.t1.utr5p1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 20129 20657 . + . ID=g12608.t1.exon1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 20437 20657 . + 0 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 20757 21511 . + . ID=g12608.t1.exon2;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 20757 21511 . + 1 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 21630 21709 . + . ID=g12608.t1.exon3;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 21630 21709 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 21898 21961 . + . ID=g12608.t1.exon4;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 21898 21961 . + 0 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 22171 22329 . + . ID=g12608.t1.exon5;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 22171 22329 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 22432 22569 . + . ID=g12608.t1.exon6;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 22432 22569 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 22736 22876 . + . ID=g12608.t1.exon7;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 22736 22876 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 23049 23186 . + . ID=g12608.t1.exon8;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 23049 23186 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 23461 24115 . + . ID=g12608.t1.exon9;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 23461 24115 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 24269 24388 . + . ID=g12608.t1.exon10;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 24269 24388 . + 1 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 24480 24534 . + . ID=g12608.t1.exon11;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 24480 24534 . + 1 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 24680 24842 . + . ID=g12608.t1.exon12;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 24680 24842 . + 0 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 24968 25203 . + . ID=g12608.t1.exon13;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 24968 25203 . + 2 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . exon 25335 26336 . + . ID=g12608.t1.exon14;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . CDS 25335 26270 . + 0 ID=cds.g12608.t1;Parent=g12608.t1 NODE_37_length_55020_cov_43.7131 . three_prime_UTR 26271 26336 . + . ID=g12608.t1.utr3p1;Parent=g12608.t1 #PROT g12608.t1 g12608 MAGPGGDSIVGVPPTSPSAASSPTEDEPDAGLGANSTAGTVRTAVPAASPPNQSRVSIVHISPADNTGSPRRTSRRGEFINLCMNVSRDIAAQSSSPFVLHGRSAVAADEDAGERVQGLWRSEDSETVRADGRDGRKRAQRSLSLSSSSNTLGDLRPTASPDQLATIRRLVRETLAQGAANPPAPDAESVEPVLSSAGSPVKKDGSQRGRSAVGTARPAPLPTSSSHRAAVGQRQQRRQSDNGLSVPVLPPIGQMTAPPPAPAPPGASAGTAQDLSGQLIVGALVRDRENSAGSGKDSGEGNDADVDHESDGAIGAALLDMCRPEIYRLIQRTRTELKGDRTWMAVIIRVLKAGEDARVLDSVAAVIYRLCDQEKLMDAFIHAGVPRLLLMLVRERCTVGGYGTQDQKLFPWLANSFKIVTRLTKRDATLGRWLRKCGTLSVAIDVLKRHVHSDGSELIGPAISICCALAGTESHGSLLLQADIIPVVLEAMRRRPSGAAGQAIMAESLQLFSRLAGGSRANLLAFVMKSNMAALLATLDDALQSPAPSPAQMSILDILLNAASIEEGRRAFLDGGGLRRVYDAAARLEGIDAMAAVVDAMADVLRCAAPAFELPIDFDAVEGLIRESESTLGLQESAESAGITASLSAGDGDFAELALSSTYQTHSMPALPTGGFPAAAEDFSLGPVDLFPEMRSRSSSREGTRERDRDPAGMEDAGEDGVTCAGGSGSAPGRADDDGSGDDGGLLRRQHFRTVPGLAPDLLLECGLTAAVESRLKQRGNLERKLILGEMRRLAYPETCAYDVVYDVDSGSAGSSVEHALCVGSLVFESRFESGNLHRAIMINPLEYDLILSPDLSSAASHNCQWFFFRVSNIRARCRYVFRVVNMEKPTSQFNEGMQPVVLSTLEHETVGTGWRRLGSDVCYYRNWYTTDRESTSRKRTPPVFFTLAFSLQFDYDGDVAYVAYHYPYTYSALQSRISQLQRLPTASRYLMRNTLCTTLGGVACDLLTITDFGDDPPVPPPVPLSQIMHSFVPPSTSAHPDTPRSRDMVAHGRVSLKRRQYVLLTARVHPGESNASWIMDGLVTFLLGGSDEAQQLLGRYIFKIVPMLNPDGVILGCNRYSMAGVDLNRQWTKPGRTVHPTIFKTKAMARFLVGLGRPPFLYCDIHGHSRKKNVFLYGCGGDRYTVEAEFPRMLANTSPAFSIDDSSFVIKRDKESTARVVMWRQFRIPRSYTLESSFCGSDRGELAGTQFAPKNLRDVGRDFCMALIKLNNGPKPGFGGTIFGY* # PASA_UPDATE: g11691.t1, single gene model update, valid-1, status:[pasa:asmbl_394,status:3], valid-1 NODE_1104_length_13944_cov_41.683 . gene 2220 6734 . - . ID=g11691;Name=g11691.t1 NODE_1104_length_13944_cov_41.683 . mRNA 2220 6734 . - . ID=g11691.t1;Parent=g11691;Name=g11691.t1 NODE_1104_length_13944_cov_41.683 . five_prime_UTR 6243 6734 . - . ID=g11691.t1.utr5p1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . exon 5040 6734 . - . ID=g11691.t1.exon1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . CDS 5040 6242 . - 0 ID=cds.g11691.t1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . exon 4311 4670 . - . ID=g11691.t1.exon2;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . CDS 4311 4670 . - 0 ID=cds.g11691.t1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . exon 3054 4050 . - . ID=g11691.t1.exon3;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . CDS 3054 4050 . - 0 ID=cds.g11691.t1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . exon 2220 2813 . - . ID=g11691.t1.exon4;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . CDS 2626 2813 . - 2 ID=cds.g11691.t1;Parent=g11691.t1 NODE_1104_length_13944_cov_41.683 . three_prime_UTR 2220 2625 . - . ID=g11691.t1.utr3p1;Parent=g11691.t1 #PROT g11691.t1 g11691 MTYSARMQRQYSQKLQPSVQQITPFLAWWGVVVVCAIVAGGIGISISTYKATSSSESDDLDVSFRQAAKDAYDGIASQLSRTVSSISNLRMVSYANENFTANQFYGAVDLLSKPAVIVAIAYIPQIPQANKAEFEARVRAENTDALSMPLYNTFRVVDYNATKRQFVPAAPRSLYYPILYLWPRPTPSNTTLIGFDIGTAVLSFGDSPRAIKTGVPVLLTGVRVLTDPAQRGILFYVPAYRSYPPQANESGRLEQGTGIFAASAKLTLLIDGARSNADPVQIFVFDLSAVEGKQLLYSEPGVTNVQNASNVQPVHGLIFRQAVDAVDRMWLVIIVPKESLVNESVTSKPKLFAGLVGLAFILLLALAVFSIRQIVRTRMQSESSDRKRRFLSEMVGYVNHEIRNPLNGIVGLVEHATETTQGCLRSANPDKELIKAILFDLKDTGNMCDLMAHIVNDVLDIRKLEDGKLTVNHEPVRLRRVLGDVFAIVQPKLSEKASLRLVLEPFDHTLTFLGDAARVKQVLLNLVTNAIKFSASGEIHVSASVVPGGPSLPSGRNFVSQQGQQHISVAMASQTMQCLRFEVRDTGRGVEDDKKALLFKPFSQIEGSPRHQGSGLGLYLCLMLVELMGGRIDFESTYGVGSSFWFEIPLLHPTESDTDSDDHGSNFANAGSGVDGFNTSPWTRALQISSTVPKEDGDTVEIELVEVEPAGASVYPSIGELAGESATQLKPRAKAPYERERTLSADDATRGVAFAETSTAASSGDGLTPDTVPMERGMSVRQRGPKDGSVRIRRHLVCDDGRINRVVLRRYLLALGNCEVDEAENGQDAVDKAAVNGYDVIWMDIKMPVLDGIEATKQIKSNPKCNGVTIIGVTGDVTVQEISLYRDIGMQDILSKPVTKAVISGKLASLDVVVR* # PASA_UPDATE: g11693.t1, single gene model update, valid-1, status:[pasa:asmbl_395,status:12], valid-1 NODE_1104_length_13944_cov_41.683 . gene 10737 13740 . + . ID=g11693;Name=g11693.t1 NODE_1104_length_13944_cov_41.683 . mRNA 10737 13740 . + . ID=g11693.t1;Parent=g11693;Name=g11693.t1 NODE_1104_length_13944_cov_41.683 . five_prime_UTR 10737 10955 . + . ID=g11693.t1.utr5p1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 10737 11015 . + . ID=g11693.t1.exon1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 10956 11015 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 11353 11436 . + . ID=g11693.t1.exon2;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 11353 11436 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 11726 11812 . + . ID=g11693.t1.exon3;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 11726 11812 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 12100 12264 . + . ID=g11693.t1.exon4;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 12100 12264 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 12466 12489 . + . ID=g11693.t1.exon5;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 12466 12489 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 12939 12981 . + . ID=g11693.t1.exon6;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 12939 12981 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 13368 13522 . + . ID=g11693.t1.exon7;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 13368 13522 . + 2 ID=cds.g11693.t1;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . exon 13720 13740 . + . ID=g11693.t1.exon8;Parent=g11693.t1 NODE_1104_length_13944_cov_41.683 . CDS 13720 13740 . + 0 ID=cds.g11693.t1;Parent=g11693.t1 #PROT g11693.t1 g11693 MSIVLKIAVQLDQVLTKSFEFQGYQTMEEVAKSIRDKMKVESGNRTWKDHMLYWPEKKKWFELQKTIDFYDLKAGTLIEYKKKHRPLKVRFLDGALKTFLIDDSQTVKEIVVHICQQIGLKGPEELSLLVDTEPGDVKSEDTAAPEATSTIVDEDREAEVKSALEMAKMSDKEYQKLTKMIIPEGVNASLRTNEAWLSPTESIASQRPSMNV* # PASA_UPDATE: g11692.t1, single gene model update, valid-1, status:[pasa:asmbl_396,status:12], valid-1 NODE_1104_length_13944_cov_41.683 . gene 8412 10400 . + . ID=g11692;Name=g11692.t1 NODE_1104_length_13944_cov_41.683 . mRNA 8412 10400 . + . ID=g11692.t1;Parent=g11692;Name=g11692.t1 NODE_1104_length_13944_cov_41.683 . exon 8412 8837 . + . ID=g11692.t1.exon1;Parent=g11692.t1 NODE_1104_length_13944_cov_41.683 . CDS 8412 8837 . + 0 ID=cds.g11692.t1;Parent=g11692.t1 NODE_1104_length_13944_cov_41.683 . exon 9286 10400 . + . ID=g11692.t1.exon2;Parent=g11692.t1 NODE_1104_length_13944_cov_41.683 . CDS 9286 10377 . + 0 ID=cds.g11692.t1;Parent=g11692.t1 NODE_1104_length_13944_cov_41.683 . three_prime_UTR 10378 10400 . + . ID=g11692.t1.utr3p1;Parent=g11692.t1 #PROT g11692.t1 g11692 MSEIASFSSLSPEIVIANVVPYLTNAERAVLAKVNGTLRAHLWSVRLLHLWPLYVDKYLVDPSFTAEFASFLPCSRLYLRTPKLNWDAPPRTDLTPFAGVHTADLWGCMQSDSNTDDLWGGEGGYGPIIGTTDLSPLQDVHTNILDFSSLSRVHTVVLGRHDATKLPDGLGLVHTVILEQWLKLNDLSAVRRVHTLIVASSSLDDVSSLRGIHTLQCIVRNVDLSPLQSAHSLKLRVADGCKVRGLSALGRVHTLDFSGQPVDKDDFLALGGVRHLTIGNLCKLMDASRLGRVRRLDIDSDLLTDVSALGGIYWLRVSSPLVRDVSALGHVHTLDLSRCGSVSDVSALGFVHTLNLSKCKLVQDVSHLGDVCNLNLKRTNVSDVSALRAVRILNLSGCPVKDVSALGRGVRELNLSYCKNVKDFSSLGGVHKLDLSFTLVEDVSSLGGVHTLDLSHCPVVDVSALGRACVLNVLCTGVVDFSPVVNVRKLIPSQGRAVSANGPCS* # ORIGINAL: g11690.t1 original gene structure, not modified by PASA NODE_1104_length_13944_cov_41.683 AUGUSTUS gene 2 1966 . + . ID=g11690;Name=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS mRNA 2 1966 . + . ID=g11690.t1;Parent=g11690;Name=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS exon 2 136 . + . ID=g11690.t1.exon1;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS CDS 2 136 . + 1 ID=cds.g11690.t1;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS exon 421 559 . + . ID=g11690.t1.exon2;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS CDS 421 559 . + 1 ID=cds.g11690.t1;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS exon 803 886 . + . ID=g11690.t1.exon3;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS CDS 803 886 . + 0 ID=cds.g11690.t1;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS exon 1090 1334 . + . ID=g11690.t1.exon4;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS CDS 1090 1334 . + 0 ID=cds.g11690.t1;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS exon 1522 1966 . + . ID=g11690.t1.exon5;Parent=g11690.t1 NODE_1104_length_13944_cov_41.683 AUGUSTUS CDS 1522 1966 . + 1 ID=cds.g11690.t1;Parent=g11690.t1 #PROT g11690.t1 g11690 PNLSFLNYEDVARNAVRGLLQRRSSIGLVGSGINVSSGEWTSTISGIGAGIDSFHEYLLKSYVLFGDIELLENFTGMFASVTRYVFVPATQTYSMVDMHSGHIRNQIADSLTCFVPGLQVLAGDVAGARRTHLFCTALWRRYAGLPERFGVALRSVIARYYPLRPELAESTFHLLEATKDPEYYKIGEDMVSTIDERARTRCGFATLKDVFTGVLEDRMESFFLSETCKYLFLIFDRDNWLVNRSVDFVFTTEGHPLPINLVPYGGFSRAKSFVDAWDHAAGTCTGEGPRSKCTTPPPTHKQRPPHKTSFMHAGRCAAHASAKKGDAWRRDEHKALSAVETVVQSCPF* # PASA_UPDATE: g8207.t1, single gene model update, valid-1, status:[pasa:asmbl_6725,status:12], valid-1 NODE_3917_length_2517_cov_38.5958 . gene 151 1418 . - . ID=g8207;Name=g8207.t1 NODE_3917_length_2517_cov_38.5958 . mRNA 151 1418 . - . ID=g8207.t1;Parent=g8207;Name=g8207.t1 NODE_3917_length_2517_cov_38.5958 . five_prime_UTR 1395 1418 . - . ID=g8207.t1.utr5p1;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . exon 1275 1418 . - . ID=g8207.t1.exon1;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . CDS 1275 1394 . - 0 ID=cds.g8207.t1;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . exon 968 1083 . - . ID=g8207.t1.exon2;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . CDS 968 1083 . - 0 ID=cds.g8207.t1;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . exon 445 741 . - . ID=g8207.t1.exon3;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . CDS 445 741 . - 1 ID=cds.g8207.t1;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . exon 151 229 . - . ID=g8207.t1.exon4;Parent=g8207.t1 NODE_3917_length_2517_cov_38.5958 . CDS 151 229 . - 1 ID=cds.g8207.t1;Parent=g8207.t1;3_prime_partial=true #PROT g8207.t1 g8207 MHSMAFGSERGLIVAAAVAAALAVAAAGVYIGRAKKSTAKKNKRYVVSQIVIYPIKSCGGISLKQSAIDRLGFVNDRRWLIIDSKTDDFITQRQKPAMALIQPSFDPHTKLLVLEAPGMPRVVVPAPTPSSAIRAVRVWGDRFDAVDLGNEVAEWVAAYLRVPTARLVTILPLDKHNRPYPEKYNTSDPKDNIQAAFSDLCPFL # PASA_UPDATE: g1717.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1301,status:3], valid-1 # PASA_UPDATE: g1717.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1300,status:12], valid-1 # PASA_UPDATE: g1717.t1, single gene model update, valid-1, status:[pasa:asmbl_1302,status:12], valid-1 NODE_1353_length_11827_cov_48.0115 . gene 1357 4967 . - . ID=g1717;Name=g1717.t1 NODE_1353_length_11827_cov_48.0115 . mRNA 1357 4967 . - . ID=g1717.t1.1.5b6be70a;Parent=g1717;Name=g1717.t1 NODE_1353_length_11827_cov_48.0115 . five_prime_UTR 4066 4967 . - . ID=g1717.t1.1.5b6be70a.utr5p1;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3635 4967 . - . ID=g1717.t1.1.5b6be70a.exon1;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3635 4065 . - 0 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3304 3490 . - . ID=g1717.t1.1.5b6be70a.exon2;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3304 3490 . - 1 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3098 3188 . - . ID=g1717.t1.1.5b6be70a.exon3;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3098 3188 . - 0 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2859 2939 . - . ID=g1717.t1.1.5b6be70a.exon4;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2859 2939 . - 2 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2549 2678 . - . ID=g1717.t1.1.5b6be70a.exon5;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2549 2678 . - 2 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2312 2415 . - . ID=g1717.t1.1.5b6be70a.exon6;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2312 2415 . - 1 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2166 2230 . - . ID=g1717.t1.1.5b6be70a.exon7;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2166 2230 . - 2 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2022 2073 . - . ID=g1717.t1.1.5b6be70a.exon8;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2022 2073 . - 0 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 1357 1877 . - . ID=g1717.t1.1.5b6be70a.exon9;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 1483 1877 . - 2 ID=cds.g1717.t1.1.5b6be70a;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . three_prime_UTR 1357 1482 . - . ID=g1717.t1.1.5b6be70a.utr3p1;Parent=g1717.t1.1.5b6be70a NODE_1353_length_11827_cov_48.0115 . mRNA 1357 4967 . - . ID=g1717.t1.2.5b6be70a;Parent=g1717;Name=g1717.t1 NODE_1353_length_11827_cov_48.0115 . five_prime_UTR 4899 4967 . - . ID=g1717.t1.2.5b6be70a.utr5p1;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 4556 4967 . - . ID=g1717.t1.2.5b6be70a.exon1;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 4556 4898 . - 0 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 4223 4379 . - . ID=g1717.t1.2.5b6be70a.exon2;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 4223 4379 . - 2 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 4039 4102 . - . ID=g1717.t1.2.5b6be70a.exon3;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 4039 4102 . - 1 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3635 3906 . - . ID=g1717.t1.2.5b6be70a.exon4;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3635 3906 . - 0 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3304 3490 . - . ID=g1717.t1.2.5b6be70a.exon5;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3304 3490 . - 1 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 3098 3188 . - . ID=g1717.t1.2.5b6be70a.exon6;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 3098 3188 . - 0 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2859 2939 . - . ID=g1717.t1.2.5b6be70a.exon7;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2859 2939 . - 2 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2549 2678 . - . ID=g1717.t1.2.5b6be70a.exon8;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2549 2678 . - 2 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2312 2415 . - . ID=g1717.t1.2.5b6be70a.exon9;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2312 2415 . - 1 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2166 2230 . - . ID=g1717.t1.2.5b6be70a.exon10;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2166 2230 . - 2 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 2022 2073 . - . ID=g1717.t1.2.5b6be70a.exon11;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 2022 2073 . - 0 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . exon 1357 1877 . - . ID=g1717.t1.2.5b6be70a.exon12;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . CDS 1483 1877 . - 2 ID=cds.g1717.t1.2.5b6be70a;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . three_prime_UTR 1357 1482 . - . ID=g1717.t1.2.5b6be70a.utr3p1;Parent=g1717.t1.2.5b6be70a NODE_1353_length_11827_cov_48.0115 . mRNA 1357 4966 . - . ID=g1717.t1;Parent=g1717;Name=g1717.t1 NODE_1353_length_11827_cov_48.0115 . five_prime_UTR 4066 4966 . - . ID=g1717.t1.utr5p1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 4039 4966 . - . ID=g1717.t1.exon1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 4039 4065 . - 0 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 3635 3906 . - . ID=g1717.t1.exon2;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 3635 3906 . - 0 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 3304 3490 . - . ID=g1717.t1.exon3;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 3304 3490 . - 1 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 3098 3188 . - . ID=g1717.t1.exon4;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 3098 3188 . - 0 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 2859 2939 . - . ID=g1717.t1.exon5;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 2859 2939 . - 2 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 2549 2678 . - . ID=g1717.t1.exon6;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 2549 2678 . - 2 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 2312 2415 . - . ID=g1717.t1.exon7;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 2312 2415 . - 1 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 2166 2230 . - . ID=g1717.t1.exon8;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 2166 2230 . - 2 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 2022 2073 . - . ID=g1717.t1.exon9;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 2022 2073 . - 0 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . exon 1357 1877 . - . ID=g1717.t1.exon10;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . CDS 1483 1877 . - 2 ID=cds.g1717.t1;Parent=g1717.t1 NODE_1353_length_11827_cov_48.0115 . three_prime_UTR 1357 1482 . - . ID=g1717.t1.utr3p1;Parent=g1717.t1 #PROT g1717.t1.1.5b6be70a g1717 MIGNGKLDMVGLRCKWCHLQHDISCGEICPCFIDHFSFGRLRIAADGTLSMLQDCLGAYSGYDGGDFNETGFDFCADQATCDPKCSFQNIKKNNYDPPAGCTCLCVATIDTGLNLGACTKSASDGICDDQCNFNHFDWDFGDCCTTRSLGQCRDPSSPRRSWRTIPELKAAATEGSDPASSMNQYIVSINPEISIDGAATFPWVPETFTSLGGVYFDKNSWGTGSITPAHEYGHAFGLYHPHVGVTDLLGMVQSLQNTGVWVSGPNCDALRINGSQVCFENRPQNFRDGSSDWTGDFCSDTRPSTDHFLCSDPDPSCANAAKCTDCVSGLPWVNTNYDNIMGYADYRYCANRGIIMSFTPQQVGRMRCYIDLKYQSWTHSVNPAPVVMAPNATVTADGVVLSWFRSIRGGTAGDDAIRYEIVRSPSFQGSVEPVRDTRFVDTHTVPGVMYTYYVATVTPNGKAKLSPASNPALLPPVDKDAKWFALVEEYNVAFDQWKKDVAASCGTELNF* #PROT g1717.t1.2.5b6be70a g1717 MARQAAMLALSASVVAIVGMAFFGIAIADGRTLQPDGHVCGTMSTIDWESHLNNILNRRSARDASGSTPPGSELPVPACEFGVHSGHESVCDNPGLRDAYTRAVQDGRADKVAITLKVHVFVEDDGSNPLIPDWRTNNELATLAGYYNKFGIFFDAEVVHHRNSTLRYSTAILTDCTPEMIGNGKLDMDCLGAYSGYDGGDFNETGFDFCADQATCDPKCSFQNIKKNNYDPPAGCTCLCVATIDTGLNLGACTKSASDGICDDQCNFNHFDWDFGDCCTTRSLGQCRDPSSPRRSWRTIPELKAAATEGSDPASSMNQYIVSINPEISIDGAATFPWVPETFTSLGGVYFDKNSWGTGSITPAHEYGHAFGLYHPHVGVTDLLGMVQSLQNTGVWVSGPNCDALRINGSQVCFENRPQNFRDGSSDWTGDFCSDTRPSTDHFLCSDPDPSCANAAKCTDCVSGLPWVNTNYDNIMGYADYRYCANRGIIMSFTPQQVGRMRCYIDLKYQSWTHSVNPAPVVMAPNATVTADGVVLSWFRSIRGGTAGDDAIRYEIVRSPSFQGSVEPVRDTRFVDTHTVPGVMYTYYVATVTPNGKAKLSPASNPALLPPVDKDAKWFALVEEYNVAFDQWKKDVAASCGTELNF* #PROT g1717.t1 g1717 MIGNGKLDMDCLGAYSGYDGGDFNETGFDFCADQATCDPKCSFQNIKKNNYDPPAGCTCLCVATIDTGLNLGACTKSASDGICDDQCNFNHFDWDFGDCCTTRSLGQCRDPSSPRRSWRTIPELKAAATEGSDPASSMNQYIVSINPEISIDGAATFPWVPETFTSLGGVYFDKNSWGTGSITPAHEYGHAFGLYHPHVGVTDLLGMVQSLQNTGVWVSGPNCDALRINGSQVCFENRPQNFRDGSSDWTGDFCSDTRPSTDHFLCSDPDPSCANAAKCTDCVSGLPWVNTNYDNIMGYADYRYCANRGIIMSFTPQQVGRMRCYIDLKYQSWTHSVNPAPVVMAPNATVTADGVVLSWFRSIRGGTAGDDAIRYEIVRSPSFQGSVEPVRDTRFVDTHTVPGVMYTYYVATVTPNGKAKLSPASNPALLPPVDKDAKWFALVEEYNVAFDQWKKDVAASCGTELNF* # ORIGINAL: g1718.t1 original gene structure, not modified by PASA NODE_1353_length_11827_cov_48.0115 AUGUSTUS gene 8621 11616 . + . ID=g1718;Name=g1718.t1 NODE_1353_length_11827_cov_48.0115 AUGUSTUS mRNA 8621 11616 . + . ID=g1718.t1;Parent=g1718;Name=g1718.t1 NODE_1353_length_11827_cov_48.0115 AUGUSTUS exon 8621 8776 . + . ID=g1718.t1.exon1;Parent=g1718.t1 NODE_1353_length_11827_cov_48.0115 AUGUSTUS CDS 8621 8776 . + 0 ID=cds.g1718.t1;Parent=g1718.t1 NODE_1353_length_11827_cov_48.0115 AUGUSTUS exon 8971 11616 . + . ID=g1718.t1.exon2;Parent=g1718.t1 NODE_1353_length_11827_cov_48.0115 AUGUSTUS CDS 8971 11616 . + 0 ID=cds.g1718.t1;Parent=g1718.t1 #PROT g1718.t1 g1718 MKTLTLFGVALVISCIRVNGAHSDDLSDWSDAFDEYKTAFQAWKEERGCNAPARPQLVPGESRLPDIAEDVISTLNQGVTVASILKEAAAQNAHGIAVMGQEHFQVRRADTTRWVPVSADSLTFIDADDSIRFKPPQDFYGGASTSFFAWSGNSNESTTSETDAAASSYELSLQSRTLSISVTPVNDSPVVRDGTYLSLKLFYDNVYSTTGVRVSDIVSKMGVVDVDTPQQEIGIAIYTGDRERWQYRSNDDGAEWKVVEASTSADSVFLKPDQWLRIVPSSASNVRRDGDSRSSLPTYASIFATNGVGLSAADVSRSDGTIILANTAYGRSTIAIAVIEDTEQGLDKFVGDLWPGYDVRIGKVLAASPYVQPPTIKDTVQQDQLTDGKMMIAFSHSESTRQKSDSIAVDVQGSYMGFSAAASVSSTSSSESTSESVGFNLFISRYVKIENVGMPPLTDLAKALARDNPSAFIDAYGTHMVLSKTYGCSLTATGNYQFSSSSSASTFKESVSASYGGGFGVSAAQSYDNSAKSADSSSTVTVSLTGDFATDGTLHPDDPTKLSGYIGLISSRWDALCVKTNVVKKATAWTWADHPDILNIGGDTVSFFNAFAGGDDGGGLKGIAVAIRTWGRMKSMVDNALADMQSIPNIANLNSYPMGKMCGASLTGPSTTAINTLTDLRTKLTSLKFYDSDAKRLLSSEFSDSVFGLVGIFNQRLLELTYKWTITMRANGRNPPLQFVFNTLSASDAASTSAGIGVSKIPLPDGMMVTCGKSTSTPCSYLSSNQWYQDNKGPYVVGPYLSGGGLVEIHGIQIAGCMALPSDDYFQETSRPPRFSGCQGLWIAALVGGLSLKEPNLPNIQELKNEILSGSIERDAQSSCIHFMSSQLPTYGDIDLNFKPCKGALPENGFQYDPFNGRISSSPVLYGFCDNPD* # ORIGINAL: g4721.t1 original gene structure, not modified by PASA NODE_3569_length_3190_cov_22.1965 AUGUSTUS gene 1 1367 . - . ID=g4721;Name=g4721.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS mRNA 1 1367 . - . ID=g4721.t1;Parent=g4721;Name=g4721.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS exon 1348 1367 . - . ID=g4721.t1.exon1;Parent=g4721.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS CDS 1348 1367 . - 0 ID=cds.g4721.t1;Parent=g4721.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS exon 1 981 . - . ID=g4721.t1.exon2;Parent=g4721.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS CDS 1 981 . - 1 ID=cds.g4721.t1;Parent=g4721.t1 #PROT g4721.t1 g4721 MAAYIARHAASIELISFAVVGAAPWILVNAVWVELPSYVDRLPEGYEIATRLALAVQCANVIPFAYGFIPMRLRPRLETTILSLMLVLVVLCACASSWWDATAQIASGEASVALIVITFLAGACGTLSNVTLWPYVSRFRPSVMLATSVGVGLSSLVPSIMGIGQHPGPHARFATASFFGAISGVAGVSFVTFCWVVCWKRNLPSQGDSEHPSCITAPSDGDCMKKEGDNADIYTRRTIDDTVADHVDGVSDGHHHTDAGETHPLLSDAASKQRRSRGQHGADTDAHKCDPGDNIDHANGCGAVFVAAQREAFPLCIMAYASVLNFFVPSVIS # ORIGINAL: g4722.t1 original gene structure, not modified by PASA NODE_3569_length_3190_cov_22.1965 AUGUSTUS gene 2500 3190 . - . ID=g4722;Name=g4722.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS mRNA 2500 3190 . - . ID=g4722.t1;Parent=g4722;Name=g4722.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS exon 2500 3190 . - . ID=g4722.t1.exon1;Parent=g4722.t1 NODE_3569_length_3190_cov_22.1965 AUGUSTUS CDS 2500 3190 . - 1 ID=cds.g4722.t1;Parent=g4722.t1 #PROT g4722.t1 g4722 RLIVSNDGINVQPNGIKTREKPDWAHVDQSQSPNIFECVQGQVVLTNTTASFVCSPKSHLAFEQILATRNVGLGNPSNWCKLGDAADTAKAIVESLGGQYQIPVVAPAGSLILWLSSLVHSARASTTVETPSQLDPWLGWRGIVYVSYRPRDEYSAAELDQRSRVHSQNRVTNHWGTRVFPKIPGGRFTKTVERHPVINRLLDRPETVFEQLGINPTFLNTPDIRALIS* # ORIGINAL: g8385.t1 original gene structure, not modified by PASA NODE_2334_length_6679_cov_42.0232 AUGUSTUS gene 5989 6524 . - . ID=g8385;Name=g8385.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS mRNA 5989 6524 . - . ID=g8385.t1;Parent=g8385;Name=g8385.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS exon 6363 6524 . - . ID=g8385.t1.exon1;Parent=g8385.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS CDS 6363 6524 . - 0 ID=cds.g8385.t1;Parent=g8385.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS exon 5989 6054 . - . ID=g8385.t1.exon2;Parent=g8385.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS CDS 5989 6054 . - 0 ID=cds.g8385.t1;Parent=g8385.t1 #PROT g8385.t1 g8385 MFASFLQGFVYLKFRELAGSQGAQKALHGRIFAGRTVTADYIPETAYNTKFPEADRHVQRFVGLLVRFSLPLRRQ* # PASA_UPDATE: g8383.t1, single gene model update, valid-1, status:[pasa:asmbl_4063,status:12], valid-1 NODE_2334_length_6679_cov_42.0232 . gene 266 1292 . - . ID=g8383;Name=g8383.t1 NODE_2334_length_6679_cov_42.0232 . mRNA 266 1292 . - . ID=g8383.t1;Parent=g8383;Name=g8383.t1 NODE_2334_length_6679_cov_42.0232 . five_prime_UTR 1259 1292 . - . ID=g8383.t1.utr5p1;Parent=g8383.t1 NODE_2334_length_6679_cov_42.0232 . exon 1135 1292 . - . ID=g8383.t1.exon1;Parent=g8383.t1 NODE_2334_length_6679_cov_42.0232 . CDS 1135 1258 . - 0 ID=cds.g8383.t1;Parent=g8383.t1 NODE_2334_length_6679_cov_42.0232 . exon 266 924 . - . ID=g8383.t1.exon2;Parent=g8383.t1 NODE_2334_length_6679_cov_42.0232 . CDS 335 924 . - 2 ID=cds.g8383.t1;Parent=g8383.t1 NODE_2334_length_6679_cov_42.0232 . three_prime_UTR 266 334 . - . ID=g8383.t1.utr3p1;Parent=g8383.t1 #PROT g8383.t1 g8383 MLQTEMATPVVQEQSRHWFPLGWPNWMRRGTSASVSTLSTSAQSCASLKSSSDAAPTSPTAGTETTAYHRAANYALAGGLVTVGGVAVSGAALLFMGFTPAGVAAGSVAAVIQSKIYAGATAGVFSYLQSVGATSMLLSAPTLLKSVAVLVGGYGVTRVATDGLLQGRNGSQAATPGTAADARGATLVDDVARATVACTKVSAGHDPAAGQSVNAGDAASDAAMHAQATINSTTSKL* # ORIGINAL: g8384.t1 original gene structure, not modified by PASA NODE_2334_length_6679_cov_42.0232 AUGUSTUS gene 2029 4206 . + . ID=g8384;Name=g8384.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS mRNA 2029 4206 . + . ID=g8384.t1;Parent=g8384;Name=g8384.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS exon 2029 4206 . + . ID=g8384.t1.exon1;Parent=g8384.t1 NODE_2334_length_6679_cov_42.0232 AUGUSTUS CDS 2029 4206 . + 0 ID=cds.g8384.t1;Parent=g8384.t1 #PROT g8384.t1 g8384 MENSMEDGALRFHLNVFVEEDSLMWKYQDTLREVNDASNLVLNLLKKIDSKRLSGSHPHLNSEQQQQQQQQQQQQIQQQTQQQQTQQQTQQQQQRQQHTQELEQREDGRKQLHSPYLHEQQQQQQQQQQQQQQQQQLQQQLLSHEQPHCNSFSGGDAEDTDSFDKWEVLCSDDCGGIEGDFGRVAFKQVLELDSSILQQRILASSHSDRSASIADSQSICGGSSSGSVESSSEESSLDGSSDDSCSQSSLDQEAIVESPLGPVDEQGNVIRYPRGRKRKRSDVESDGRDEEGDTSEESIVGVSLSRPAKRERTEASTQGACSALRASDGSVSKHIATTHTLVVSKNPTPVKSGGGRRKRASTSPGRALQLRVNGDADDVHTEDAHTEESQTLVSALLKLTQADACGMTQLACASVNEIGRIAAQIRPCRLAFSVVQLPANHVDPAVIACRPTEAQWPDLAEAVEAEKDPGAGIMVTCESDEHGKKKQTFSSAFAFPYSSFARRCLDSYRFDSVKQFLAELPAGMGNTPLLDLPFDEQLPCGLTVQALLSIAFGDGRRPALLGRRLDDTTFDLPTQTMRAMARMVETGSTTARGVLVLNNAELLADCTKSSPPPPPGGAAVLFPANYGDRIVWSVALYDAGMSVPMCVHSLLAQETLRAAAVLPDEVMCKVLAKASTSSTEMLWYKCLLVAAEFVGYWEGKEGGVATDVRGLKQRIVADLLRCGQM* # ORIGINAL: g5433.t1 original gene structure, not modified by PASA NODE_2329_length_6714_cov_42.0892 AUGUSTUS gene 586 3585 . + . ID=g5433;Name=g5433.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS mRNA 586 3585 . + . ID=g5433.t1;Parent=g5433;Name=g5433.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS exon 586 3585 . + . ID=g5433.t1.exon1;Parent=g5433.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS CDS 586 3585 . + 0 ID=cds.g5433.t1;Parent=g5433.t1 #PROT g5433.t1 g5433 MTRQSGTKTMAPVVDTATHAHSHTTPEEDAILADLVFGNYCNFGDLASMTESSPESTPGSMSPAASFADFSQMGHEWDATNGGGVFLGDDLLQSLSPNCNVSAEVTAALASQQAAATAALHAAMGLAGNALAMNGLGQSINSKRDIKREPHSPPVGVVPNQSPSPPPVIGGMHQIPGLSWPAPMQMGGGLPGNLGAFSMGFSGARVSDKMPISRLPTAAGKAVRIVTKQEKKVAHNAIERRYRNSINDRILELRDIVPTCGDSSSSSKLNKATILRKAIDYIAFLQGSSQRAKDENIVLKATIQNAGLEMPDIVARNFQQQSQQEAKQRASADDAMDEDDDASDDSAESHNTAAVPATHNRAGLGDGSRMVMFALVFVFAFLSPLDLGTLGQSAAVKTSSRTLSSAEVEDLSAAILAPYVFVTSIAWWIVKATFALICLAVALSSEPVVAAGSRRMKTASELHKRAASALSVGDAAHATDLLVRACDALGRPVPSSSAGIALSLTWQCVRQAMHRLWIGSVIDSLVSGRSQDARSSFAMSAVVLDALHQAMPLNESSSRRVWAAVCAVNVAEASGDSISAGFLAEVYFALAATVRLALSGRVGAAVSRKYLSLSREVRHESSSMDASMSWLYHPDGSRFFLSGAWTSGVLQESKRDRSLSIVALVGRLYRSSLAESSVAALIGQGGAGTALDLARRAGRYSADCGDLVSSWWASTLSACAIFRSGSRTADAVREVRAAEALGVASDTTRDALNAAVLSRVALVAGDPFVAAATCDNASRLIKEDIMASASEEAPGSFGGAVRVLSLTMLLQSRTDLWRRLLVSARRVAANADAGRRGVVSSSAASSSASVGKYKQLAMRVSAAVDEDLAMLRQVATCQSDAVPKVHLFHAIARSLRDGTATRTAHLFAKATLAARKRSCAYDEGLSLMYSAELAGIAGHSAQPMGRVASPAGGSGLGSPEDAVQSLTQARALFQSVGALGEAARCNSLLRVGSHVKRDE* # ORIGINAL: g5434.t1 original gene structure, not modified by PASA NODE_2329_length_6714_cov_42.0892 AUGUSTUS gene 4097 6142 . - . ID=g5434;Name=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS mRNA 4097 6142 . - . ID=g5434.t1;Parent=g5434;Name=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS exon 5831 6142 . - . ID=g5434.t1.exon1;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS CDS 5831 6142 . - 0 ID=cds.g5434.t1;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS exon 5164 5565 . - . ID=g5434.t1.exon2;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS CDS 5164 5565 . - 0 ID=cds.g5434.t1;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS exon 4659 4793 . - . ID=g5434.t1.exon3;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS CDS 4659 4793 . - 0 ID=cds.g5434.t1;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS exon 4097 4312 . - . ID=g5434.t1.exon4;Parent=g5434.t1 NODE_2329_length_6714_cov_42.0892 AUGUSTUS CDS 4097 4312 . - 0 ID=cds.g5434.t1;Parent=g5434.t1 #PROT g5434.t1 g5434 MGAGGHWAVAFAVGFYITTSITQLIVTKWVLASSSAGSFELAFLWVQFVIAVVLQVACGLARFVAVPSVTVEKCWGVRNLILVNVVGLGLNTLCLKYVDASFYQVARGLILPFTVFLSHHILHQPSSRRILLACVVVSSGFLVGLSEVGAAHVTTVGVVFGVTSSLGTAFHAIVIKDALKVVGDNMMDLVFYNNLLSSVAMFPIIVASGQWSEMWRLLTGPQTYGGDLRLFLSGTLVTGFVGFLINIAGFLQIQVTSPNTHMISSACKGVLQTLIAITVFGDKVSLARWIGVALILGGSTYYTKVRSSEIGGHGHASGHGHGHSSKHASTQGANMPATHTHAHSHALPHEHEDV* # ORIGINAL: g928.t1 original gene structure, not modified by PASA NODE_3274_length_3855_cov_39.1997 AUGUSTUS gene 113 1386 . + . ID=g928;Name=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS mRNA 113 1386 . + . ID=g928.t1;Parent=g928;Name=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS exon 113 170 . + . ID=g928.t1.exon1;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS CDS 113 170 . + 0 ID=cds.g928.t1;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS exon 523 568 . + . ID=g928.t1.exon2;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS CDS 523 568 . + 2 ID=cds.g928.t1;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS exon 956 1076 . + . ID=g928.t1.exon3;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS CDS 956 1076 . + 1 ID=cds.g928.t1;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS exon 1288 1386 . + . ID=g928.t1.exon4;Parent=g928.t1 NODE_3274_length_3855_cov_39.1997 AUGUSTUS CDS 1288 1386 . + 0 ID=cds.g928.t1;Parent=g928.t1 #PROT g928.t1 g928 EFITALSVTSRGNLDEKLDWAFRLYDIDGNGEISRDEMLCIVHAIYRMVGNLVQLAPDEDTPEKRVEKIFSLMDKNADGRLTLAEFREGAKRDPTIVQALSLYDNSV* # PASA_UPDATE: g929.t1, single gene model update, valid-1, status:[pasa:asmbl_5813,status:12],[pasa:asmbl_5814,status:12], valid-1 NODE_3274_length_3855_cov_39.1997 . gene 1647 3836 . - . ID=g929;Name=g929.t1 NODE_3274_length_3855_cov_39.1997 . mRNA 1647 3836 . - . ID=g929.t1;Parent=g929;Name=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 3764 3836 . - . ID=g929.t1.exon1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 3764 3836 . - 0 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 3388 3476 . - . ID=g929.t1.exon2;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 3388 3476 . - 2 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 3142 3183 . - . ID=g929.t1.exon3;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 3142 3183 . - 0 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 2897 2957 . - . ID=g929.t1.exon4;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 2897 2957 . - 0 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 2614 2688 . - . ID=g929.t1.exon5;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 2614 2688 . - 2 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . exon 1647 2426 . - . ID=g929.t1.exon6;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . CDS 1819 2426 . - 2 ID=cds.g929.t1;Parent=g929.t1 NODE_3274_length_3855_cov_39.1997 . three_prime_UTR 1647 1818 . - . ID=g929.t1.utr3p1;Parent=g929.t1 #PROT g929.t1 g929 MFKAPAPLVIKKKDGSSAAIGEKKADPRDEAFSEMMKRIKSGTVQLKKRDTDVKEEKGNHMNELANMLSLNKGLKSGAAPRPEKGGAAAPPRVEDELSRKLNKVRPVSMAINIDAKAQQALADAEAKAREKAAQENAARERAVKELETKKRAAEEALAREKAAAAALQKAQAESAAAAKSASQPQSTPQAAQQPQQQQQQQQQQQLQQQERARLEQAAKEKERVAAEALEREKAKAEAAARDKALAEARERIAREKAAEEERKAAEAASLRENIAKAQRESLYALEDKQGDAGDSLDLDYDSVFADIEATLADII* # ORIGINAL: g13684.t1 original gene structure, not modified by PASA NODE_3438_length_3465_cov_26.6324 AUGUSTUS gene 656 1807 . - . ID=g13684;Name=g13684.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS mRNA 656 1807 . - . ID=g13684.t1;Parent=g13684;Name=g13684.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS exon 656 1807 . - . ID=g13684.t1.exon1;Parent=g13684.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS CDS 656 1807 . - 0 ID=cds.g13684.t1;Parent=g13684.t1 #PROT g13684.t1 g13684 MITDVSALNGVHHLVLRYCNGVTDVSALNGVHNLDLFKCTGVTDVSALGSVHQLNLAYCRGVTDVSALGGVHQLNLAYCRGVTDVSALGGVHQLDLEYCRGVTDVSALGGVHHLDLSDCKGVTDVSALGGVHHLKLFRCTAVTYVSALGGVHHLDLSECNKVTDVSALGGVYRLDLSDCIGVTDVSALNGVHHLNLSECIGVTDVSALGGVHHLDLSHTRVTDVSALGGVHHLNLHSCTKVTDVSALGGVYHLDLGDCTGVTDVSALGGAHHLNLYHCTGVTDVSALNGVHYLILRRTKVTDVSALGGVHHLNLSGCTGVTDVSVLGGVQYLDLSGCTGVTDVSALGGVQNLYLSGCTGVTDVSALNGVHHLKGLSARLLPPS* # ORIGINAL: g13685.t1 original gene structure, not modified by PASA NODE_3438_length_3465_cov_26.6324 AUGUSTUS gene 2464 3332 . - . ID=g13685;Name=g13685.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS mRNA 2464 3332 . - . ID=g13685.t1;Parent=g13685;Name=g13685.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS exon 3288 3332 . - . ID=g13685.t1.exon1;Parent=g13685.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS CDS 3288 3332 . - 0 ID=cds.g13685.t1;Parent=g13685.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS exon 2464 3075 . - . ID=g13685.t1.exon2;Parent=g13685.t1 NODE_3438_length_3465_cov_26.6324 AUGUSTUS CDS 2464 3075 . - 0 ID=cds.g13685.t1;Parent=g13685.t1 #PROT g13685.t1 g13685 MNRSTGAFASGWYGVHHLELYKCTGVTDVSALGGVHHLDLSFTGVNDVSALGGVHHLELSYCTGVTDVSALGGVHHLDLTSCTGVTDVSALGGVHHLVLWCCKGVMDVSALNGVHHLNLSNCTGVRDVSALGGVHHLELSYCTGVTDVSPLNGVHHLDLSSCTGVTDVSALNGVHHLNLSGCIGVTDVSALGGVHYLDLRGTGVMDRSALRGVYQLRF* # ORIGINAL: g10092.t1 original gene structure, not modified by PASA NODE_1678_length_9799_cov_48.8663 AUGUSTUS gene 87 4342 . - . ID=g10092;Name=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS mRNA 87 4342 . - . ID=g10092.t1;Parent=g10092;Name=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 4221 4342 . - . ID=g10092.t1.exon1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 4221 4342 . - 0 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 3994 4083 . - . ID=g10092.t1.exon2;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 3994 4083 . - 1 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 3742 3860 . - . ID=g10092.t1.exon3;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 3742 3860 . - 1 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 3313 3433 . - . ID=g10092.t1.exon4;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 3313 3433 . - 2 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 2968 3062 . - . ID=g10092.t1.exon5;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 2968 3062 . - 1 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 2812 2832 . - . ID=g10092.t1.exon6;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 2812 2832 . - 2 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 2486 2577 . - . ID=g10092.t1.exon7;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 2486 2577 . - 2 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 2076 2208 . - . ID=g10092.t1.exon8;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 2076 2208 . - 0 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 1829 1907 . - . ID=g10092.t1.exon9;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 1829 1907 . - 2 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 1388 1591 . - . ID=g10092.t1.exon10;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 1388 1591 . - 1 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 1064 1193 . - . ID=g10092.t1.exon11;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 1064 1193 . - 1 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 624 747 . - . ID=g10092.t1.exon12;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 624 747 . - 0 ID=cds.g10092.t1;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 87 334 . - . ID=g10092.t1.exon13;Parent=g10092.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 87 334 . - 2 ID=cds.g10092.t1;Parent=g10092.t1 #PROT g10092.t1 g10092 MASIAAVVASLSAADIYALLRSRAFVLSAGAAVALLSWLYARRTTTSSKKGGEIRKILRQKTRNSLVTGTTHLLTEFRQIFDKLATKGCLSSENILEAFNLLSLYPSHAQVSDMVRCANRETESYLTYGEFCVIATELRYLCKLNAQNETNSRTLWNRAKRSASLSSASAPPITAPALRKRRDSRPRFEVFLGGSCNPTTWRRDYAIPILQKSHLTFYNPQVDEWYPELMEIEAQAKDSASLLFFVVDNQTRGIASMIEVAYLSGIGRELILVTNDFPAEAMIDGAFISAAEICDLNDGHCLLRDIVERKGVPVFSDTRIALECTVKVLRHGVPIENLGAEDGARPVTHSRFAVGELLLKVKETFNLYDSDGSGELDVDEMLVALKSMDATMTSEACAKLLKMYDLDNSGHLSFEEFCCMVSEMGQSGNPFEGLLTVEGTMSSDFSGIQPGLYCREVFLGGSCASTSWRQDTAIPLLRSAGVTFFNPQVERWSASFMSIEARAKQECKTLLFVIDGETRAIVPMIE # PASA_UPDATE: g10095.t1, single gene model update, valid-1, status:[pasa:asmbl_2308,status:3], valid-1 NODE_1678_length_9799_cov_48.8663 . gene 8379 9678 . + . ID=g10095;Name=g10095.t1 NODE_1678_length_9799_cov_48.8663 . mRNA 8379 9678 . + . ID=g10095.t1;Parent=g10095;Name=g10095.t1 NODE_1678_length_9799_cov_48.8663 . five_prime_UTR 8379 8430 . + . ID=g10095.t1.utr5p1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . exon 8379 8745 . + . ID=g10095.t1.exon1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . CDS 8431 8745 . + 0 ID=cds.g10095.t1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . exon 8860 8947 . + . ID=g10095.t1.exon2;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . CDS 8860 8947 . + 0 ID=cds.g10095.t1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . exon 9078 9240 . + . ID=g10095.t1.exon3;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . CDS 9078 9240 . + 2 ID=cds.g10095.t1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . exon 9400 9678 . + . ID=g10095.t1.exon4;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . CDS 9400 9457 . + 1 ID=cds.g10095.t1;Parent=g10095.t1 NODE_1678_length_9799_cov_48.8663 . three_prime_UTR 9458 9678 . + . ID=g10095.t1.utr3p1;Parent=g10095.t1 #PROT g10095.t1 g10095 MLRSLSQSAALARVHLSRASSSTGAYAFPASRTSIITLPSRANISVSGGHLIGAHHSEGNIVSGCGCGCIPTNRRLFGTNATTNDGRPFHVPFEELAPRIKEAEKTKKGDFVLVDVRTDAEVQQGIIPTAVHIPLNQLPVALQGTSAADFESKYKTQLPDKKAEIIFYCKSGVRSESAAQLAKTLGYDGARSYRGSWTEWSEKALRS* # ORIGINAL: g10094.t1 original gene structure, not modified by PASA NODE_1678_length_9799_cov_48.8663 AUGUSTUS gene 6141 8033 . - . ID=g10094;Name=g10094.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS mRNA 6141 8033 . - . ID=g10094.t1;Parent=g10094;Name=g10094.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 7503 8033 . - . ID=g10094.t1.exon1;Parent=g10094.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 7503 8033 . - 0 ID=cds.g10094.t1;Parent=g10094.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 6141 7334 . - . ID=g10094.t1.exon2;Parent=g10094.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 6141 7334 . - 0 ID=cds.g10094.t1;Parent=g10094.t1 #PROT g10094.t1 g10094 MRQRKNGEFMCLAEDSDEAEDCFASGPQQLPTEAVSHTSLMPRKNNRKRYIVPSILCLVLLLVWARYGEYLMLNRLQLTTEAETTISFDGRRHYGRDASFMLRYEPERNLPQKADKLSGATQQNKAKDEDAERSLAYNYMTIERGLRYCTASSMVVGSNGRLQPQCASSCVGSECYKILNDPRQRSDQKNIETQALDVTLAMHGTINQLGVIRIAFEAWRGAKTIIFYVPSNEMDAALSTIAAEIDIVSPGGRLSPLRDAVVAVFSESATSPETQGGGLPGGFKYPSNVLRNIAMDLTRTEFVLPLDAGAIPSANAYSVISSLLAQMEQHGARVAFVLPVFESLPCPRGMHADRGTALSHIAAFSATSIHGDNLMPTTDAGLLELWQSGHVRPSRCDSLHAPSSLKRMSLPRDDPSFASARAVIQQCGIHTMPHSSEMRGKCVNERYFVDYQTWSARLFGRKSPSLVLIATNVEDGVSRDAAMESYVIFNIRTNRYRIPRFHEPLSGTVFARSAHMLALSQEGFHFYAVDTAFVIKTQAIQGDTASTTDGIEAYSVYTASTKEHVQRDKDFAMS* # ORIGINAL: g10093.t1 original gene structure, not modified by PASA NODE_1678_length_9799_cov_48.8663 AUGUSTUS gene 5062 5748 . - . ID=g10093;Name=g10093.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS mRNA 5062 5748 . - . ID=g10093.t1;Parent=g10093;Name=g10093.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS exon 5062 5748 . - . ID=g10093.t1.exon1;Parent=g10093.t1 NODE_1678_length_9799_cov_48.8663 AUGUSTUS CDS 5062 5748 . - 0 ID=cds.g10093.t1;Parent=g10093.t1 #PROT g10093.t1 g10093 MGFIFDPEVLHQIAKDAISKNLPTEEMVRIIATRLNEKYPGHINMEQNWLFNIAGGAMGAMYILHASITEYVIIFGTPIGTEGYSGRFLADDYFIILEGEQWAFSEGQLNKEVYKPGTLHHLPMGHAKVRFAFMLGFFMLVIADLVSSVIYSLFSIVHSLFIAMLSYTQGYRMPDRCWALEYARGCIPAMLPFGIADTLTSTLDPVVLGRTFYTYGKLVCKELLQGKI* # ORIGINAL: g3130.t1 original gene structure, not modified by PASA NODE_4314_length_1834_cov_355.152_potentialcontaminant AUGUSTUS gene 2 1834 . + . ID=g3130;Name=g3130.t1 NODE_4314_length_1834_cov_355.152_potentialcontaminant AUGUSTUS mRNA 2 1834 . + . ID=g3130.t1;Parent=g3130;Name=g3130.t1 NODE_4314_length_1834_cov_355.152_potentialcontaminant AUGUSTUS exon 2 1834 . + . ID=g3130.t1.exon1;Parent=g3130.t1 NODE_4314_length_1834_cov_355.152_potentialcontaminant AUGUSTUS CDS 2 1834 . + 1 ID=cds.g3130.t1;Parent=g3130.t1 #PROT g3130.t1 g3130 LGGATRLTFSVSDYATVQTVTVTAGAVGATSVGGAQVSGSSRVVTSTMLGVTIVSDPILIIGSDGVRLHPGQSFNVGVRLSSAPLSSLTVSCAVLNSSIGTVDARSLVFDANNFDVAQTVAVVGGGAIGSSLITGGRVVDGCVGVSKSAEPSYVIEARARNGNTGFEGVLFTPFEPSPGNSGTQLDPAGAPAWNYNQYHRFEFTYDGMSGKATWSIDFNRDGDFGDLEESTASTSPSLVGKGFKYVNIWGQGSSSGMALMVANVTVNGMSFGSAMSNTGSAFSQLYEVSSGIFRTVNVTGMVRITGAGGQEAPRLWVRAGVPVDLSSASVVNGGAAVDSFVCRGLIVSGANLETVKIPSVTVLSVDRSILVPGRVSRMTFALSSAPLASGSVLVQAVDSAITDLGSNGRTFSFTPADYSLARTVSVRAVSPGATDVIFSADSAGNPLVSASSHVSSLVAPSVIVTPTSASAYTNKRVSVSVRLSSDPTESVTVVPSVSGDAGAIAQILCGDAQAGSVTFTREDFGVDKTCVVVAGAAAGTGSAAFGYSGGYPGGAAGTVQLDVAAVPGVSTRVERSALNPSESTVMYVRMSSRLIGDAVVSVSSASSSVV # PASA_UPDATE: g7449.t1, single gene model update, valid-1, status:[pasa:asmbl_7391,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 25508 27168 . + . ID=g7449;Name=g7449.t1 NODE_44_length_52339_cov_55.9044 . mRNA 25508 27168 . + . ID=g7449.t1;Parent=g7449;Name=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 25508 25533 . + . ID=g7449.t1.exon1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 25508 25533 . + 0 ID=cds.g7449.t1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 25836 25926 . + . ID=g7449.t1.exon2;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 25836 25926 . + 1 ID=cds.g7449.t1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 26012 26263 . + . ID=g7449.t1.exon3;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 26012 26263 . + 0 ID=cds.g7449.t1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 26342 26625 . + . ID=g7449.t1.exon4;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 26342 26625 . + 0 ID=cds.g7449.t1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 26712 26782 . + . ID=g7449.t1.exon5;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 26712 26782 . + 1 ID=cds.g7449.t1;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . exon 26861 27168 . + . ID=g7449.t1.exon6;Parent=g7449.t1 NODE_44_length_52339_cov_55.9044 . CDS 26861 27168 . + 2 ID=cds.g7449.t1;Parent=g7449.t1 #PROT g7449.t1 g7449 MLLLSLLTKVATTSSGLSAQIIRAVLLPIVALELFLNLLMKLYDKIIYTPLYHLHAPFVAIIPRTVAVFGTEWTVFTANGVTYFRTILFVPIAICLKNNWNDFAFGLAVFHDYLDHLDGIVAKVQKLRGDRDDPILGSFLDAFCDKIVNVFSFWTILILMNYGAMSFWESATVLLCVGLVIISEAILGYVRVQDYFHTRYNPDTPRNLAASMEGKLKEKLESMGIMFLCLALKEPNIWKHWGSWAGIGCLALTVKMAYASLAHKMAARGGHAQSAADSPSEPSATPAVRGRKRQSQPAPPTSTSPAGRGRSTRASAASPARSVSRSPARSRSPARRKAAGLAK* # ORIGINAL: g7435.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 1145 2582 . - . ID=g7435;Name=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 1145 2582 . - . ID=g7435.t1;Parent=g7435;Name=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 2490 2582 . - . ID=g7435.t1.exon1;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 2490 2582 . - 0 ID=cds.g7435.t1;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 1664 2380 . - . ID=g7435.t1.exon2;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 1664 2380 . - 0 ID=cds.g7435.t1;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 1527 1575 . - . ID=g7435.t1.exon3;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 1527 1575 . - 0 ID=cds.g7435.t1;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 1145 1416 . - . ID=g7435.t1.exon4;Parent=g7435.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 1145 1416 . - 2 ID=cds.g7435.t1;Parent=g7435.t1 #PROT g7435.t1 g7435 MSHGNSSPMGSERDWVVLSDGEGDSRNASDTSSRLSLRSPPRPNSADSTAELVHPPSSASCRSTPSSCEGNPFADDDDGADNAVSEDAPCNSSAQGGLRHRRPSHGRSVSSDAAVSQSLRVPLRTHSPSPSPSPRHERGAVRGPTCDGTSLRAHATVQEHSVAGPTKSVCATAWMGTLGAQTEADVPLFRAAAALAARVAEMRGAQLRGQQHDLRNENQGCVSYKVAEEIDVVATLQMAIQGMATKIAASENALADKERECRSLRDQVAAIRQQFPVMADSDAKQKGKGKLHAVDPFANIDRPQRKHKKRREGGFFTSLQYAIFRNLNCCFPHSMHSSGECDDPTCECRESSGSSGEVPSGPRINAFEAVRTSVFK* # ORIGINAL: g7450.t2 original gene structure, not modified by PASA # ORIGINAL: g7450.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 27600 30680 . + . ID=g7450;Name=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 27600 30680 . + . ID=g7450.t2;Parent=g7450;Name=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 27600 28241 . + . ID=g7450.t2.exon1;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 27600 28241 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 28363 28596 . + . ID=g7450.t2.exon2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 28363 28596 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 28720 29895 . + . ID=g7450.t2.exon3;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 28720 29895 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 29982 30230 . + . ID=g7450.t2.exon4;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 29982 30230 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 30329 30424 . + . ID=g7450.t2.exon5;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 30329 30424 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 30528 30680 . + . ID=g7450.t2.exon6;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 30528 30680 . + 0 ID=cds.g7450.t2;Parent=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 27600 29958 . + . ID=g7450.t1;Parent=g7450;Name=g7450.t2 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 27600 28241 . + . ID=g7450.t1.exon1;Parent=g7450.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 27600 28241 . + 0 ID=cds.g7450.t1;Parent=g7450.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 28363 28596 . + . ID=g7450.t1.exon2;Parent=g7450.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 28363 28596 . + 0 ID=cds.g7450.t1;Parent=g7450.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 28720 29958 . + . ID=g7450.t1.exon3;Parent=g7450.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 28720 29958 . + 0 ID=cds.g7450.t1;Parent=g7450.t1 #PROT g7450.t2 g7450 MAGLLIETATASAMLAVETATPPVLASTSASAAQQTGQTVSIGTHSRNGSAQSFRSLAKTGMLSVTARSCSSMASLCEADTVDTADAADADDDDESGEGDGDDIESISRDDGDAILRAGAVSGKSDRDILFHGTVEKTRGAFTVPVTKHIGNAALSEGFDDTSIATASNDTHDVSDANSTPPLISLHPPYSSNAPVQEIRTSPFEESLAVFQEKFARYDRASWESVLEREESKLGLVQPKKRAQVKAELIDVDLVRGSMFFKAKPREAGPHIIRKGFVRAIFFPFFRSWWSQELSFRPWIIGTVLYLLHSISVAVYMWDDQADLGPYSPSAVNMTRMPSPFGTSVSSLEVFFPLGILVVLGIVYAQVAATTFTGTGRGEAGDSSDSDSDASASDEDHHHSSSENDDQKTGAPAVVGGGCVDGQSAGVAQLGATGVRSRTRSTRGTARHASSVRPPRSAGRSAAGIGQSKAAGVGSSSSGHARREPTAHRSLFSDMSYVPEYVPEITGPPAAIGRVSASLWDANDVCHKVSLTLPELSSAIIDKVSRSQESSLYVFTAIAGGMAVAILPAAYRVLMGGATSGRGADGADFLGDFDAGKALSVSLGLSWSCRFVVVTSMLSTFCLSFAFFFALAVAERTYHQRFLYAKYFGVLTSMRRARRCLLPHFRLHKVCNIKMWLSLRSYLKRKGPQRSVDTVVSSSFILALFMIGIMTAQVLGATKDVVFLTTLFNWEIALWCLLMSLYLLRFLTLGARINRKYQNTCLLLTEQINLYLRMEQAPHKKSELVISNNVLKLATKLLKELESPYKISGLSMNPLLYNVTRMVVLSAFSAVMSELLGFKLKIWKINAKM* #PROT g7450.t1 g7450 MAGLLIETATASAMLAVETATPPVLASTSASAAQQTGQTVSIGTHSRNGSAQSFRSLAKTGMLSVTARSCSSMASLCEADTVDTADAADADDDDESGEGDGDDIESISRDDGDAILRAGAVSGKSDRDILFHGTVEKTRGAFTVPVTKHIGNAALSEGFDDTSIATASNDTHDVSDANSTPPLISLHPPYSSNAPVQEIRTSPFEESLAVFQEKFARYDRASWESVLEREESKLGLVQPKKRAQVKAELIDVDLVRGSMFFKAKPREAGPHIIRKGFVRAIFFPFFRSWWSQELSFRPWIIGTVLYLLHSISVAVYMWDDQADLGPYSPSAVNMTRMPSPFGTSVSSLEVFFPLGILVVLGIVYAQVAATTFTGTGRGEAGDSSDSDSDASASDEDHHHSSSENDDQKTGAPAVVGGGCVDGQSAGVAQLGATGVRSRTRSTRGTARHASSVRPPRSAGRSAAGIGQSKAAGVGSSSSGHARREPTAHRSLFSDMSYVPEYVPEITGPPAAIGRVSASLWDANDVCHKVSLTLPELSSAIIDKVSRSQESSLYVFTAIAGGMAVAILPAAYRVLMGGATSGRGADGADFLGDFDAGKALSVSLGLSWSCRFVVVTSMLSTFCLSFAFFFALAVAERTYHQRFLYAKYFGVLTSMRRARRCLLPHFRLHKVCNIKMWLSLRSYLKVGWRVIPQTFVGFPLGIENC* # PASA_UPDATE: g7436.t1, single gene model update, valid-1, status:[pasa:asmbl_7376,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 3442 6114 . - . ID=g7436;Name=g7436.t1 NODE_44_length_52339_cov_55.9044 . mRNA 3442 6114 . - . ID=g7436.t1;Parent=g7436;Name=g7436.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 6039 6114 . - . ID=g7436.t1.utr5p1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 5955 6114 . - . ID=g7436.t1.exon1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 5955 6038 . - 0 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 5794 5844 . - . ID=g7436.t1.exon2;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 5794 5844 . - 0 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 5601 5690 . - . ID=g7436.t1.exon3;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 5601 5690 . - 0 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 5267 5446 . - . ID=g7436.t1.exon4;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 5267 5446 . - 0 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 4193 5019 . - . ID=g7436.t1.exon5;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 4193 5019 . - 0 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . exon 3442 4041 . - . ID=g7436.t1.exon6;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . CDS 3693 4041 . - 1 ID=cds.g7436.t1;Parent=g7436.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 3442 3692 . - . ID=g7436.t1.utr3p1;Parent=g7436.t1 #PROT g7436.t1 g7436 MSNMPASREEALAAERLRGFKNNSLTDQDLRRRRHDANIGLRKQKRGDQLLKKRNVHLDDEEESQVAAMPINAEQLEKLALAILNGDPETQFYATQQVRKLLSKEKTPPIKEIVAFGLVPNFVSFLSYDHLPNLQFEAAWSLTNVASGTPEQTAAVIEAGAIPALVRLLGSPNDDVRDQCVWALGNIAGDGETCRDYVLSTGCVQPLLHIIANAAPDATKSHIHNATWTLSNLCRGKRPAPDFEAVRPMIPTLVQLLNHSDPTVIADACWGLSYLTDGPNEQIEVVVRTQCVRRLVELLMSPEHSVTVPALRTIGNIVTGDDNQTQTVINCGALKRLVPLLENERENIRKEACWTLSNITAGNAEQIGQVIVEGAFPRLIRLLESGEFKTRKEAAWCICNVCTGGIPEQVKYLVSIGVIKPLVKMLEVAQTDPKIVLVILEAFDTICKTGETGTKENEHADMLEEAGGLDMIIALHQHDNMAIYHKTFQLIDTYWKDTDDTAVAPQVQGGQYAFGSTGTPQSGFQF* # ORIGINAL: g7444.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 15675 17747 . + . ID=g7444;Name=g7444.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 15675 17747 . + . ID=g7444.t1;Parent=g7444;Name=g7444.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 15675 17747 . + . ID=g7444.t1.exon1;Parent=g7444.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 15675 17747 . + 0 ID=cds.g7444.t1;Parent=g7444.t1 #PROT g7444.t1 g7444 MDRPPRDSAEDATSLRISDLHPHADEDAICAALAAALHPPISCYVVRDRGTGDSLCYGFVNYATRSAALGALRECSFSIRVCGRPLCLSLVRARQSSGSDGGARNYVEPGSLYISNLPPTPFGAADLYALFSHFGTVTRCVLRPSVGAEAAHGFVEFLSADEAQRALALSGLRVGSRSIRVSFSRSVDRQSVQRHVRNDEDRARAIPIAIPSRGESVFEVTDDSGDVAKDTHRPPSPVTTGRRELETDHPTLPSTYGVYSRVTKRPNDSSPTRPPAKKRRAEEVGLADVNMAKRPQAVSVFGGGTQVDDYTPAEKTLLTPAEIQMEMFRQAKAKGRATDVTARRESMQEDSAHPAGDSLLATSPTANRAADAGAITYSVASPKPTCDAASELHDLAEHQDNSTNGCVDPCVDSAAASPTPAHFQGNPDAEGGHAGNGDAAFTQQIKTRVQSALASARIAIDGCFGRLENEIVCAITVEGGGEHAHQSPPPIFEATGPAAAHNSESTPTAAPWRISSHDCRLPHLDSSFCGLRTHLRHEPVVTVVARDGYLFAAQADGTCWKFQVNDEVRCPLCTGRACVIIPGLIPHVVMAPQGSSAGEILVAGAACGVTAMAICDGNALDEREGHVGGLAVCGFADRTVRIFRCDNGTCVWDASLESALTSLWVDGHSGRFIAGLTNANVVEMDLKVGM* # PASA_UPDATE: g7455.t1, single gene model update, valid-1, status:[pasa:asmbl_7393,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 44982 47257 . + . ID=g7455;Name=g7455.t1 NODE_44_length_52339_cov_55.9044 . mRNA 44982 47257 . + . ID=g7455.t1;Parent=g7455;Name=g7455.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 44982 45165 . + . ID=g7455.t1.utr5p1;Parent=g7455.t1 NODE_44_length_52339_cov_55.9044 . exon 44982 46207 . + . ID=g7455.t1.exon1;Parent=g7455.t1 NODE_44_length_52339_cov_55.9044 . CDS 45166 46207 . + 0 ID=cds.g7455.t1;Parent=g7455.t1 NODE_44_length_52339_cov_55.9044 . exon 46330 47257 . + . ID=g7455.t1.exon2;Parent=g7455.t1 NODE_44_length_52339_cov_55.9044 . CDS 46330 46643 . + 2 ID=cds.g7455.t1;Parent=g7455.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 46644 47257 . + . ID=g7455.t1.utr3p1;Parent=g7455.t1 #PROT g7455.t1 g7455 MGFDWGAVVAHRRQSARGSVFLVALLACIYFSLVSSAAATASCGNGQHYCDSGCPFSNTTACTEAGTYCSGIKDGQPLTPLCESFIAQYCAHSPNDPGCCGSSKPLRCLYGRHCVATANECPTSNCQSVNVPCGFGKCSGAYSCGGGCVANRTQTCPASTRCVGGYMCGEETCTSVLGTCDPPVGNFNNNQPYCPSNMRYCGKECPFDDKSFCNSLDSACVDGIYSAKCNSTIAAFCANNTKDGGCCGGKTPFRCASGFCAASASSCNAYPYCARFNESCPAESKCPGGNYCGDESGRCVSPDGAAQCPEQGGIYDRIFLNDAPRSVAYVCLKPKCYVTRDYGVTFLPLPATVVDLIGVDSEGRLFAKGDPFPRLISTDQGESFQSTQTKPAALTYATIPPAEGELTLETATERPWLLSSDGVYVRSNGAWARRASWGCNNMCRRASSPYR* # PASA_UPDATE: g7452.t1, single gene model update, valid-1, status:[pasa:asmbl_7380,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 37429 40084 . - . ID=g7452;Name=g7452.t1 NODE_44_length_52339_cov_55.9044 . mRNA 37429 40084 . - . ID=g7452.t1;Parent=g7452;Name=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 39909 40084 . - . ID=g7452.t1.exon1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 39909 40084 . - 0 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 39595 39816 . - . ID=g7452.t1.exon2;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 39595 39816 . - 1 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 39428 39448 . - . ID=g7452.t1.exon3;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 39428 39448 . - 1 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 39112 39313 . - . ID=g7452.t1.exon4;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 39112 39313 . - 1 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 38663 39029 . - . ID=g7452.t1.exon5;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 38663 39029 . - 0 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 38484 38584 . - . ID=g7452.t1.exon6;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 38484 38584 . - 2 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 38316 38399 . - . ID=g7452.t1.exon7;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 38316 38399 . - 0 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 38073 38209 . - . ID=g7452.t1.exon8;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 38073 38209 . - 0 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 37840 37963 . - . ID=g7452.t1.exon9;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 37840 37963 . - 1 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . exon 37429 37677 . - . ID=g7452.t1.exon10;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . CDS 37546 37677 . - 0 ID=cds.g7452.t1;Parent=g7452.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 37429 37545 . - . ID=g7452.t1.utr3p1;Parent=g7452.t1 #PROT g7452.t1 g7452 MAGLWRCGGVASAGVLTEISGDAGGANLLGLHGMPFSTASPMSCLTRRVEGASISNENGPAMNTPRRRLSLTSAFVGTPSPMSPVVHRPTTTLATASCAEIRHEESTTPETTPDLHRTRGLLEDESPSSTPYGPTGNAARNLEAHSPARSFSRAIRRTISSPAAPHMPLVRASSGNKRQNTGAVHRLCALRRDSTDESESSKNADSMDDDFDPNDSPKRKRSSSITGSDPLARSWPCSGQWHEAMNARPQATAVRRRACDIPVPGALLEEGAAVLERGSSGPLRRHTSWTGVSFPSRPTPLGVFEPVDDLPECEETDTAAEAVSLLPPPANQIDLYDRGDGERCQLPIVTGKHPDLKSITPETLLAMCSGAYKDRFEKVFVVDCRFGYEFEGGHIRDALNLWTREQVEERFLRRPIVEHRVAIVFHCEFSSSRGPKLLRYLRREDRRIHSEKGIYPNLYYPELYILYGGYKSFFGQFPSECEPHAYIPMKTKEYKCQMQRQIRISKNSRSKPMPEALVKHD* # PASA_UPDATE: g7448.t1, single gene model update, valid-1, status:[pasa:asmbl_7388,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 24362 25301 . + . ID=g7448;Name=g7448.t1 NODE_44_length_52339_cov_55.9044 . mRNA 24362 25301 . + . ID=g7448.t1;Parent=g7448;Name=g7448.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 24362 24509 . + . ID=g7448.t1.utr5p1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . exon 24362 24608 . + . ID=g7448.t1.exon1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . CDS 24510 24608 . + 0 ID=cds.g7448.t1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . exon 24708 24751 . + . ID=g7448.t1.exon2;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . CDS 24708 24751 . + 0 ID=cds.g7448.t1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . exon 24839 24851 . + . ID=g7448.t1.exon3;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . CDS 24839 24851 . + 1 ID=cds.g7448.t1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . exon 24999 25067 . + . ID=g7448.t1.exon4;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . CDS 24999 25067 . + 0 ID=cds.g7448.t1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . exon 25176 25301 . + . ID=g7448.t1.exon5;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . CDS 25176 25262 . + 0 ID=cds.g7448.t1;Parent=g7448.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 25263 25301 . + . ID=g7448.t1.utr3p1;Parent=g7448.t1 #PROT g7448.t1 g7448 MGLLFLQYLSGKRIFTCSECEAHLSRHEEIISKSFHGAHGRAYLFNQVVNVSTTGLHTVMDVYCNKCQTVLGWKYEKAFEESQKYKEGKFILEKALIAETNSD* # PASA_UPDATE: g7457.t1, single gene model update, valid-1, status:[pasa:asmbl_7382,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 49589 50953 . - . ID=g7457;Name=g7457.t1 NODE_44_length_52339_cov_55.9044 . mRNA 49589 50953 . - . ID=g7457.t1;Parent=g7457;Name=g7457.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 50847 50953 . - . ID=g7457.t1.utr5p1;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . exon 50301 50953 . - . ID=g7457.t1.exon1;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . CDS 50301 50846 . - 0 ID=cds.g7457.t1;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . exon 49914 50138 . - . ID=g7457.t1.exon2;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . CDS 49914 50138 . - 0 ID=cds.g7457.t1;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . exon 49589 49757 . - . ID=g7457.t1.exon3;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . CDS 49698 49757 . - 0 ID=cds.g7457.t1;Parent=g7457.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 49589 49697 . - . ID=g7457.t1.utr3p1;Parent=g7457.t1 #PROT g7457.t1 g7457 MGQGQSAPAEAGECRVDDECIEDAGSVERRQQCDTCACGHKVAMDGEYNPKLLGTIKYYDRHVIICDGRDDWLEKLAQEEGSLAAALQEAIKARGDEIPNRPLITACSEQSMGAHGVDVIVYPEGIRYFEVDADAIPAFVEDQIVRGRICQSLRHAPVEFEQFVLVCTHGTRDKRCGRSGPQVVDTLRDILHERDIPDQRVAVRASSHLGGHKHAGVVTVYPHGDWYGQMSAKNAGELIDAYLGEGHRYHRGWRGKMGIGKEDTRALYGAFIDKAS* # ORIGINAL: g7446.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 19450 20192 . - . ID=g7446;Name=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 19450 20192 . - . ID=g7446.t1;Parent=g7446;Name=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 20081 20192 . - . ID=g7446.t1.exon1;Parent=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 20081 20192 . - 0 ID=cds.g7446.t1;Parent=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 19909 19997 . - . ID=g7446.t1.exon2;Parent=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 19909 19997 . - 2 ID=cds.g7446.t1;Parent=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 19450 19806 . - . ID=g7446.t1.exon3;Parent=g7446.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 19450 19806 . - 0 ID=cds.g7446.t1;Parent=g7446.t1 #PROT g7446.t1 g7446 MSEDMYNDGYRHITNVDFSGVVIARMSEKCAHCPEMKWLTMDITDMAAFRDGSFDVVLEKGTIDALLVDEKDPWNPTGAAIGLMHKILSETSRVLTTNGTFVSITFAQPHFRRPFLAHSGYAWALQEPVATFGEYFHYFAYCISKVGPFDPDVPLVFPFRMPVDAPVIFDDSSDDENFLSEIDGL* # PASA_UPDATE: g7438.t1, single gene model update, valid-1, status:[pasa:asmbl_7377,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 9740 10851 . - . ID=g7438;Name=g7438.t1 NODE_44_length_52339_cov_55.9044 . mRNA 9740 10851 . - . ID=g7438.t1;Parent=g7438;Name=g7438.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 10811 10851 . - . ID=g7438.t1.utr5p1;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . exon 10438 10851 . - . ID=g7438.t1.exon1;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . CDS 10438 10810 . - 0 ID=cds.g7438.t1;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . exon 10117 10348 . - . ID=g7438.t1.exon2;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . CDS 10117 10348 . - 2 ID=cds.g7438.t1;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . exon 9740 10036 . - . ID=g7438.t1.exon3;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . CDS 9856 10036 . - 1 ID=cds.g7438.t1;Parent=g7438.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 9740 9855 . - . ID=g7438.t1.utr3p1;Parent=g7438.t1 #PROT g7438.t1 g7438 MEVLGQLQVRSLTFLSVGIAMTTIFTCYGFAVGLGHVPAWLPMISDCAVQAPERYPFRFGIISGAVLMIINVVIMYTYLATLRLQATSFGPKYDMTSMILGTVASLGLATVGAVNEEELLPVHDGAAVTFFGLYQVYMILVTLKLQRCSANVFGSRLSPDRAALSLKIKTVAACVSLGALLTLLVLGLNFDENRTGIAVMEWLSTLCVQFFNLSYCIEFTDDFTLSTIFYPATSSIEAGPVTVWRQMDLAAPIFRAEKSQA* # PASA_UPDATE: g7439.t1, single gene model update, valid-1, status:[pasa:asmbl_7371,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 11155 11736 . + . ID=g7439;Name=g7439.t1 NODE_44_length_52339_cov_55.9044 . mRNA 11155 11736 . + . ID=g7439.t1;Parent=g7439;Name=g7439.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 11155 11243 . + . ID=g7439.t1.utr5p1;Parent=g7439.t1 NODE_44_length_52339_cov_55.9044 . exon 11155 11736 . + . ID=g7439.t1.exon1;Parent=g7439.t1 NODE_44_length_52339_cov_55.9044 . CDS 11244 11660 . + 0 ID=cds.g7439.t1;Parent=g7439.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 11661 11736 . + . ID=g7439.t1.utr3p1;Parent=g7439.t1 #PROT g7439.t1 g7439 MSGDDQDDVDVESDEFDDTTDPPGGRNDSYGLARTLSAERDRSDGSKPEKRAHHNALERKRRDHIKDSFSVLRDCIPTLVGDKASRAMILNRATDYIQFMRKKNDVQEHEVDDLRRQNKSLADQIKALERETGTTPHD* # PASA_UPDATE: g7447.t1, single gene model update, valid-1, status:[pasa:asmbl_7385,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 20948 22324 . + . ID=g7447;Name=g7447.t1 NODE_44_length_52339_cov_55.9044 . mRNA 20948 22324 . + . ID=g7447.t1;Parent=g7447;Name=g7447.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 20948 21007 . + . ID=g7447.t1.utr5p1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 20948 21175 . + . ID=g7447.t1.exon1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 21008 21175 . + 0 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 21272 21397 . + . ID=g7447.t1.exon2;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 21272 21397 . + 0 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 21503 21586 . + . ID=g7447.t1.exon3;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 21503 21586 . + 0 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 21692 21812 . + . ID=g7447.t1.exon4;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 21692 21812 . + 0 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 21900 22102 . + . ID=g7447.t1.exon5;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 21900 22102 . + 2 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . exon 22240 22324 . + . ID=g7447.t1.exon6;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . CDS 22240 22260 . + 0 ID=cds.g7447.t1;Parent=g7447.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 22261 22324 . + . ID=g7447.t1.utr3p1;Parent=g7447.t1 #PROT g7447.t1 g7447 MDTFQYETQALGFTPISFVDGVINAVTDYVFDGADQLRSALLREAVAFPEKDWVYKGMDSALEHVQSAIDKNFDKFELYVLKNIFHLPASTVLPWDEKALSLAKSTAEEEAAVDAEMAVLRAKCRKLRRVNAELRQESELLKPTIEKVEEASKMLETFAAASKKADVPIGTLSETFEHLCGHALELQAVLASAGQLSRKRHANSSASTKNVNALEAEFRAKRQRVDSAASRDLKVLLKIL* # ORIGINAL: g7445.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 18385 19428 . + . ID=g7445;Name=g7445.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 18385 19428 . + . ID=g7445.t1;Parent=g7445;Name=g7445.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 18385 19428 . + . ID=g7445.t1.exon1;Parent=g7445.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 18385 19428 . + 0 ID=cds.g7445.t1;Parent=g7445.t1 #PROT g7445.t1 g7445 MQAATKGITALDIAIADRSDGQAILAVTGHIDGQLEVMRTTAGGGDVRCQWSHCQVWCPGAARLGGHVQSAHMSTERPHFSCLWAQCGVEFYSCVQLRLHAKAAHSLDVTAPAPMQSQQHAECTRDSNGGPERLQKEPNKADGNDSRPLPRASQMDAKQRGDATGLRAEKHATDGTSGEGNHRTKPKNATATRGNSTMSKGQFKHAKTGPRLGPASFQCDVCQRWFASRANLTNHKTNVHDFLAGLCSTFGLDTSTQDAPRADMQHKNHPRANGRAPSTATDDAYAYDASDPYSVLRLHRAASQADVRRQYRSLALRWHPDRNPDNQDEANRRFKDIVAAYTALVVK* # ORIGINAL: g7437.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 8658 9720 . + . ID=g7437;Name=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 8658 9720 . + . ID=g7437.t1;Parent=g7437;Name=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 8658 8813 . + . ID=g7437.t1.exon1;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 8658 8813 . + 0 ID=cds.g7437.t1;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 8907 8992 . + . ID=g7437.t1.exon2;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 8907 8992 . + 0 ID=cds.g7437.t1;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 9281 9365 . + . ID=g7437.t1.exon3;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 9281 9365 . + 1 ID=cds.g7437.t1;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 9458 9539 . + . ID=g7437.t1.exon4;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 9458 9539 . + 0 ID=cds.g7437.t1;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 9632 9720 . + . ID=g7437.t1.exon5;Parent=g7437.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 9632 9720 . + 2 ID=cds.g7437.t1;Parent=g7437.t1 #PROT g7437.t1 g7437 MSDNVNDVLVSPGQRIGSATDYLAGPGAYARGDAIHASLVGRVAVAHNGEGKAMLRVLSDEGDLFAKVPEVGSIVTVKVSTSQDVRATEKDSVEIYKCFRPGDIVAAEVISLGDARSYYLSTARNELGVVHATSEAGVRMTPVSWCEMQCPKTMAVEQRKVAKVM* # ORIGINAL: g7434.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 99 998 . + . ID=g7434;Name=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 99 998 . + . ID=g7434.t1;Parent=g7434;Name=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 99 238 . + . ID=g7434.t1.exon1;Parent=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 99 238 . + 0 ID=cds.g7434.t1;Parent=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 336 517 . + . ID=g7434.t1.exon2;Parent=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 336 517 . + 1 ID=cds.g7434.t1;Parent=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 802 998 . + . ID=g7434.t1.exon3;Parent=g7434.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 802 998 . + 2 ID=cds.g7434.t1;Parent=g7434.t1 #PROT g7434.t1 g7434 LMAEQSELLDCLRQKEQAREFHPVKLVRKKDAERRKKQRRIEWMQKLYLRDQQLDGTERTSQSKGGGDDFDDAEADELVQWTTGLSFDDYADNWAAVGVTAMDTAPRSRTVDASVGDPYRVRLDGDQLQSLGFLPPISPSGRAVDGKPSVAVDEVYLSRPRGQRDRLPQIPT* # ORIGINAL: g7441.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 13671 13889 . - . ID=g7441;Name=g7441.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 13671 13889 . - . ID=g7441.t1;Parent=g7441;Name=g7441.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 13671 13889 . - . ID=g7441.t1.exon1;Parent=g7441.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 13671 13889 . - 0 ID=cds.g7441.t1;Parent=g7441.t1 #PROT g7441.t1 g7441 MDEYRRVRTTIAALGEQASRLSALHAGLLAQNASAVRTAHSLARLQGNLVSPSLWAPSAEKAVVPANTVNSN* # PASA_UPDATE: g7453.t1, single gene model update, valid-1, status:[pasa:asmbl_7392,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 40722 41766 . + . ID=g7453;Name=g7453.t1 NODE_44_length_52339_cov_55.9044 . mRNA 40722 41766 . + . ID=g7453.t1;Parent=g7453;Name=g7453.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 40722 40782 . + . ID=g7453.t1.utr5p1;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . exon 40722 40860 . + . ID=g7453.t1.exon1;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . CDS 40783 40860 . + 0 ID=cds.g7453.t1;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . exon 40977 41136 . + . ID=g7453.t1.exon2;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . CDS 40977 41136 . + 0 ID=cds.g7453.t1;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . exon 41579 41766 . + . ID=g7453.t1.exon3;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . CDS 41579 41733 . + 2 ID=cds.g7453.t1;Parent=g7453.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 41734 41766 . + . ID=g7453.t1.utr3p1;Parent=g7453.t1 #PROT g7453.t1 g7453 MSAMTATVRAVARSRLRVPVKAALTLTPTAVTRVSELLARKPEAIALKIGIQKKGCSGQAYTVDYASSKAPGDEEVLQNGARVLIGPNALFSILGSELDYVENPRDMSGGFVFNNPNIKGTCGCNESFSI* # ORIGINAL: g7440.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 11808 13629 . - . ID=g7440;Name=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 11808 13629 . - . ID=g7440.t1;Parent=g7440;Name=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 13468 13629 . - . ID=g7440.t1.exon1;Parent=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 13468 13629 . - 0 ID=cds.g7440.t1;Parent=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 12292 12781 . - . ID=g7440.t1.exon2;Parent=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 12292 12781 . - 0 ID=cds.g7440.t1;Parent=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 11808 12196 . - . ID=g7440.t1.exon3;Parent=g7440.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 11808 12196 . - 2 ID=cds.g7440.t1;Parent=g7440.t1 #PROT g7440.t1 g7440 MAVNVGIPDFSHEELSNGGYDDDEPLCDGGQEDRVRLQSFVAYRDGVREDQWVEIWAAAEMQGLATAIIDWPGSDVPIAGIRPSFWRPYPGHVSTASIVQMILEHANSKPDSTISWLRGYNAKKAPCFIAAYVPTVDTVAHMYGPDSPEVNAAISEVDTAIGTIFASISPDANIVILSDHGMSAISWNRSIVLDDFVPSEWLTVSAYGPVAFLDPTEATTARDIFDRLEGVHPQMVPYMREDLPARFHYGSNRRVSRIVVLAEPGWCIVTKSIIAVDPTACSGGNHGYDNEATDMGAIFVAQGPAFKSGVIVDLIANLDVYPLLGRLLGISVAPNNGTSAAISLLR* # ORIGINAL: g7456.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 47510 49530 . + . ID=g7456;Name=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 47510 49530 . + . ID=g7456.t1;Parent=g7456;Name=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 47510 47659 . + . ID=g7456.t1.exon1;Parent=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 47510 47659 . + 0 ID=cds.g7456.t1;Parent=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 47746 48184 . + . ID=g7456.t1.exon2;Parent=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 47746 48184 . + 0 ID=cds.g7456.t1;Parent=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 48323 49530 . + . ID=g7456.t1.exon3;Parent=g7456.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 48323 49530 . + 2 ID=cds.g7456.t1;Parent=g7456.t1 #PROT g7456.t1 g7456 MAHLLWLRRRLNRIGVDGDVCADYLMCMLDDAEDGEELAREYLTELTGGNDLESARVIAELTAVVRGDIVVDNSAEDEEAAEERPFAPLEGGDQDAEHAHHCDHAAPPAPAADMSAPLDVLADLFPHIPTDVLANYLADSGGNVASCTDAILGREDEAYDDGGGWLCGDEGGDWESEEALLDLGDGGTDGGNALSQGETEQIFDYKRGRPVCMYFSVGICRRGSACNFNHCDVATLEARDAEAQGQQGLGMLQNNNNVPPTEALRPSICRYYALGKCYRADCAFAHVDRLHAAAAPVICRFWLAGGCARGADCEFAHVSAPNAASGIAVDDSAPGITQPTIAASPPPPAALEFPALVTHAGVAGVERPQTNPGLDFRQAASLGASKRPAPQQRSGIAVAAPARPVRLLPSSSSSVPWVETGAAVAEQYQKTRAEAIALLAARNRLYQEASTAYSRGFGANARHLAREARELDAEMRRLHTEAAGRMFAERNGAGLVRAGAQLQEMKSLPWVRRRCVDLHGLHADEAVAVLEACIETMRAVTAGERSPHFDVITGTGHHARWDGRARVQPAVQKALRNMGVSFADASTDGRAGLLRLFM* # PASA_UPDATE: g7454.t1, single gene model update, valid-1, status:[pasa:asmbl_7381,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 41712 43620 . - . ID=g7454;Name=g7454.t1 NODE_44_length_52339_cov_55.9044 . mRNA 41712 43620 . - . ID=g7454.t1;Parent=g7454;Name=g7454.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 43412 43620 . - . ID=g7454.t1.utr5p1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 43353 43620 . - . ID=g7454.t1.exon1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 43353 43411 . - 0 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 43221 43258 . - . ID=g7454.t1.exon2;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 43221 43258 . - 1 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 42952 43077 . - . ID=g7454.t1.exon3;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 42952 43077 . - 2 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 42703 42815 . - . ID=g7454.t1.exon4;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 42703 42815 . - 2 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 42522 42615 . - . ID=g7454.t1.exon5;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 42522 42615 . - 0 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 42320 42411 . - . ID=g7454.t1.exon6;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 42320 42411 . - 2 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 42075 42216 . - . ID=g7454.t1.exon7;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 42075 42216 . - 0 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . exon 41712 41978 . - . ID=g7454.t1.exon8;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . CDS 41872 41978 . - 2 ID=cds.g7454.t1;Parent=g7454.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 41712 41871 . - . ID=g7454.t1.utr3p1;Parent=g7454.t1 #PROT g7454.t1 g7454 MVVFAENRVIVSGEQPVKEWEELSVAPSEASIVAPDRLASERKKKSSPRLRRDSLNSRLNPGFEGSRRYRRWENLCFLLDNAGEIDEYKDVILPNKSRSYFASLFEDEAKLKTWLSFLEASEEAQLSIAAIGTHSKKAVPKESDFCMEPSSPADCFGRIERHIRDALRCTNVPKGLLEYMEKELVDAFMTSSQFVLVWMLGSSYDRLLAHGLCQYYSLVSRSEDTDQGRQTIIENPNDFFTVPEAPLCAFLAKSHS* # ORIGINAL: g7442.t1 original gene structure, not modified by PASA NODE_44_length_52339_cov_55.9044 AUGUSTUS gene 14155 14872 . + . ID=g7442;Name=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS mRNA 14155 14872 . + . ID=g7442.t1;Parent=g7442;Name=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 14155 14220 . + . ID=g7442.t1.exon1;Parent=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 14155 14220 . + 0 ID=cds.g7442.t1;Parent=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 14332 14397 . + . ID=g7442.t1.exon2;Parent=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 14332 14397 . + 0 ID=cds.g7442.t1;Parent=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS exon 14504 14872 . + . ID=g7442.t1.exon3;Parent=g7442.t1 NODE_44_length_52339_cov_55.9044 AUGUSTUS CDS 14504 14872 . + 0 ID=cds.g7442.t1;Parent=g7442.t1 #PROT g7442.t1 g7442 MADLFGIDGRKLLVALYKNVSNCGPLKESLVRGHIEVAMVNAELLLVAAKKVCHAMDSGHLKTRSVHAEFIYQLSPTTSISDSFAKFGVSASTRHIVVAAIAPTEEQWVRACESVAGTSIPLVDIGTLSNPSKIRSTYRILDEELGHGHMPLLDAVVTRMCVKEIT* # PASA_UPDATE: g7443.t1, single gene model update, valid-1, status:[pasa:asmbl_7378,status:3], valid-1 NODE_44_length_52339_cov_55.9044 . gene 14871 15371 . - . ID=g7443;Name=g7443.t1 NODE_44_length_52339_cov_55.9044 . mRNA 14871 15371 . - . ID=g7443.t1;Parent=g7443;Name=g7443.t1 NODE_44_length_52339_cov_55.9044 . five_prime_UTR 15297 15371 . - . ID=g7443.t1.utr5p1;Parent=g7443.t1 NODE_44_length_52339_cov_55.9044 . exon 15255 15371 . - . ID=g7443.t1.exon1;Parent=g7443.t1 NODE_44_length_52339_cov_55.9044 . CDS 15255 15296 . - 0 ID=cds.g7443.t1;Parent=g7443.t1 NODE_44_length_52339_cov_55.9044 . exon 14871 15171 . - . ID=g7443.t1.exon2;Parent=g7443.t1 NODE_44_length_52339_cov_55.9044 . CDS 14914 15171 . - 0 ID=cds.g7443.t1;Parent=g7443.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 14871 14913 . - . ID=g7443.t1.utr3p1;Parent=g7443.t1 #PROT g7443.t1 g7443 MSAATPSVRQLYKQLLFMGREYPLGYDYFRKRAKAAFLKNKDTTSQDEVIKLVDRGVYVMKELETLYMLRKYRALKSRYYPEDTREMQLLRLQKMEAEI* # PASA_UPDATE: g7451.t1, single gene model update, valid-1, status:[pasa:asmbl_7372,status:12], valid-1 NODE_44_length_52339_cov_55.9044 . gene 31183 37407 . + . ID=g7451;Name=g7451.t1 NODE_44_length_52339_cov_55.9044 . mRNA 31183 37407 . + . ID=g7451.t1;Parent=g7451;Name=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 31183 31248 . + . ID=g7451.t1.exon1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 31183 31248 . + 0 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 31461 31574 . + . ID=g7451.t1.exon2;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 31461 31574 . + 0 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 31758 32175 . + . ID=g7451.t1.exon3;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 31758 32175 . + 0 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 32365 33566 . + . ID=g7451.t1.exon4;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 32365 33566 . + 2 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 33653 33786 . + . ID=g7451.t1.exon5;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 33653 33786 . + 0 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 33888 34433 . + . ID=g7451.t1.exon6;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 33888 34433 . + 1 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 34585 35006 . + . ID=g7451.t1.exon7;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 34585 35006 . + 1 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 35104 35475 . + . ID=g7451.t1.exon8;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 35104 35475 . + 2 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . exon 35618 37407 . + . ID=g7451.t1.exon9;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . CDS 35618 37380 . + 2 ID=cds.g7451.t1;Parent=g7451.t1 NODE_44_length_52339_cov_55.9044 . three_prime_UTR 37381 37407 . + . ID=g7451.t1.utr3p1;Parent=g7451.t1 #PROT g7451.t1 g7451 MQRKEYEEVQENESQALQAIFGTQRPPEFQIKLSPHLAGNEEAHVGLELYFRMRRRYPDKVPEFEVRNAVGISHAAQAELRAALLDKAEGMVGSEMVFELTQHARDFLGRHNHPSLSFYEEHRRNQMRLQDERARAESRESERARAILVEEKRRAVADHRALRGEIAQALAARETAAANPNDRDNALAADLSSGDEAGDGTSPAPHNGGDVSSTLQQRQAVAPVTLSGDAAPIDPGEVRVGKCVLRTPTEEAYVGMLPSGDLACIRSYVVRVGDAAAHKITAGVSEIVDGVRRLVNLRNPRIVSLLGASASHGEDGAVTLSVVGEFVGGGTIASRLDVFGRLEVSTVRHFGKCVCLALAYLHDQDVAHGHLDASCALVDYDGGIRLEGFFVRWAVERWRTAAAGRRNSGGVRGGDEALTQLDDVRCAPEASGHRGRGKPAVKGDMWAFGCLLLDLCLGTSYIPSVVGCGGGSGHRGAPPIPGSLPAALRDVIIACFQRVADRPSAPEVLQMPFFEETVPRSVLNPPALDDALERDDGDDTTFLGAQSERRAIVAKVPHVGRNGDTEAEAEVPSTASMSRYRADFEEIAFLGRGGFGEVLKVRNRLDLRLYAMKKIRLNLKDKEMTGKITREVKLLSRLHHEYVVRYYQAFVESSNGDTWNSLTGASAMSDDAASEAGHGAAYATDDESDDSDSDSDSDGGGDGTCGSDAGTSSEPGSIDPDTADSYGSQSNDDDIVFGDDEGKLGIAHAFSRADEATAATTVSTAVVRGETARGDAHVLYIQMEYCENTLRHLIDQGLPSDVSASWRLFRQIVEGLAYIHGEGITHRDLKPQNLFLLNGNIKIGDFGLATSTTGAGRDTVVLNHQRSIEMSASAAGRRGPEDASDNADSMASGAAVGTTFYVSPELMRLRAGMRYSQKVDLYSLGIIFFEMCHAIGTGMERATVLGELRRKEVVFPSDFDKGKLASQVLGHGILFSLLTAPIDACHPLAATIIARLLDHDPRLRPTATELLESELLPPKIEDESMKEVTRLLTQRNTPAYNRLMGNLFSQPTSKTREYTYDLEIAGDGLGQRSAFVRARVKERIARVFARHGGIELETSLLSPLSDAHRHANEVVLMDHAGGLVSLPYDHTVPFARRIARQGIQTLRRFAFGRVYRDIAADCHPRELYECCFDIVEHSAAGLVPDAEVARVASEVISEFGLLKERRYRLRVNHAALVTAIMSACGVGPAEHASVSELLAQTARMDMSWRKTRNVLVRQGRVSPIVADAIGQFVTVRGDMDTLAKTVRLLTTRQMATAALTQVGQGLRDLRRFQELVAAFGLEQPVLFDLGLLVNANLYSGIIFAFVADPEQDGAGTSGWCARGDIIAHGGRYDALVAEFRPPTSRLSAPGAVGVIIDLSKITSMEMATESMGKKHVGCADVLVCSVGKTSVDDRILIARELWGANIRAEVAYDVAHPPTVDAMQARCREAGIPWMIVLKDRSLKEGAVRVRNVELRTESEVSRRDVCEFVSLAMRSRRARDPVTAGDGQGEGHHHHHHHDHAQGVADAGESVRTARAAEVKVSVLPRDKLQSHRRKRVQGLAAERVATVTRGGSGGRPVLAVDLPGPLVRLFAASADVSNRDSIKTVCDANPRFRDHIAEMWEFLVAASTDAHVVFLYSYRDDVLAAVIVRVSRKANS* # ORIGINAL: g1761.t1 original gene structure, not modified by PASA NODE_133_length_36560_cov_43.383 AUGUSTUS gene 22249 24007 . - . ID=g1761;Name=g1761.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS mRNA 22249 24007 . - . ID=g1761.t1;Parent=g1761;Name=g1761.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 23357 24007 . - . ID=g1761.t1.exon1;Parent=g1761.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 23357 24007 . - 0 ID=cds.g1761.t1;Parent=g1761.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 22249 23244 . - . ID=g1761.t1.exon2;Parent=g1761.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 22249 23244 . - 0 ID=cds.g1761.t1;Parent=g1761.t1 #PROT g1761.t1 g1761 MGGAQSRETEVLGPELTLRHFDMLRAIGRGAFSKVEAVRRKGNGRLYALKCIDKDECVRQRMAEHIIYERQLLEDLKHPFIVNLRFSFQDPVYLFMGLDLMMGGDLHYHVIQKGALNPDHVRFYAAEIMLALAYLHDQNVVHRDVKVCGFRHTHVASAVRMLVTLPTACTIPPQPDNILLDAQGHAHLSDFNMAVKIAPSSGGVTGISGTLHYMAPEVLRNQRYDASVDWWSLGVVVFQLLTAKQPYRGKDTKSMVKEIESVDIEAMLQTKGLPDVHVAFALQLLHVDPARRPGSGSSGGSGASSPRGRASSSNLPAPIASASNPLLRHPVFVGVDWALLSEKKAAPPFTPDMQELNFNPAYELEDLLLDNSPLRAHQEYGPRPGLRPNPGMDAAFAAFEYYDEEDPHSVAVNELARSMPSEEARIFREKMLRMHRADAAMRGKLTLLPPRPLMRAAGGGRAMSAESAEAAGLGASGVHDAPRPRGRDRADSVERIRAASIAVVRQHGSGNQSRSSESLAVLSEEPSAPRLARAAWKSAENIAGELPV* # PASA_UPDATE: g1757.t1, single gene model update, valid-1, status:[pasa:asmbl_1258,status:12],[pasa:asmbl_1259,status:12],[pasa:asmbl_1261,status:12], valid-1 NODE_133_length_36560_cov_43.383 . gene 10051 12175 . - . ID=g1757;Name=g1757.t1 NODE_133_length_36560_cov_43.383 . mRNA 10051 12175 . - . ID=g1757.t1;Parent=g1757;Name=g1757.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 12136 12175 . - . ID=g1757.t1.utr5p1;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . exon 11339 12175 . - . ID=g1757.t1.exon1;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . CDS 11339 12135 . - 0 ID=cds.g1757.t1;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . exon 10585 11139 . - . ID=g1757.t1.exon2;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . CDS 10585 11139 . - 1 ID=cds.g1757.t1;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . exon 10051 10272 . - . ID=g1757.t1.exon3;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . CDS 10170 10272 . - 1 ID=cds.g1757.t1;Parent=g1757.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 10051 10169 . - . ID=g1757.t1.utr3p1;Parent=g1757.t1 #PROT g1757.t1 g1757 MSFATVVVALLAASVLVAADTPANCLYEDLRGTWLFYKGPAGQTNAVDCSADVTVDSVATVTLTYPDVASDGADKGFFTIIYNQGFEVVVSGVKYFAFSKYTKDASGNVTSFCDTTFNGWYHNADGTNWGCYYGRKIASTSLDGVAVRATPMRHGLSEEEKARPYVPDLDFVRRINSAQSLWVADAYEKEYAGMTIGDLHRRAGGSSASVADRSAFHATAAAAKKVEPARGRTSEVIPKSFDWRNVDGVNYVSPVRDQGSCGSCYAFASMGMMEARARVATNNTYAPVLSTQYIVSCSEYSQGCDGGFSYLAGGKFGQDFGHLEESCYVYEGVTSKCKDVTCDKKRLFVRNYRYIGGYFGALSTSNGHTHDFAVEQIQLEILRGGPVATDIMVYPDFQMYKGGVYTHTGLRSSSATGFNPFELTNHVVVIVGWGETDDGTPYWIVRNVSITWSASWGESGYVRVIRGQDMVAIESMPVAVDLDL* # PASA_UPDATE: g1756.t1, single gene model update, valid-1, status:[pasa:asmbl_1257,status:12], valid-1 NODE_133_length_36560_cov_43.383 . gene 6565 9627 . - . ID=g1756;Name=g1756.t1 NODE_133_length_36560_cov_43.383 . mRNA 6565 9627 . - . ID=g1756.t1;Parent=g1756;Name=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 9447 9627 . - . ID=g1756.t1.exon1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 9447 9627 . - 0 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 9044 9297 . - . ID=g1756.t1.exon2;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 9044 9297 . - 2 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 8838 8903 . - . ID=g1756.t1.exon3;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 8838 8903 . - 0 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 8425 8605 . - . ID=g1756.t1.exon4;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 8425 8605 . - 0 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 8175 8252 . - . ID=g1756.t1.exon5;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 8175 8252 . - 2 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 7886 8014 . - . ID=g1756.t1.exon6;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 7886 8014 . - 2 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 7490 7763 . - . ID=g1756.t1.exon7;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 7490 7763 . - 2 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 7057 7312 . - . ID=g1756.t1.exon8;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 7057 7312 . - 1 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . exon 6565 6883 . - . ID=g1756.t1.exon9;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . CDS 6692 6883 . - 0 ID=cds.g1756.t1;Parent=g1756.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 6565 6691 . - . ID=g1756.t1.utr3p1;Parent=g1756.t1 #PROT g1756.t1 g1756 MAEYLSLMSDESADESRDAFSAASMGPSNGRGSASAPSSRRVSREESAAIDLMEAPEESVADAGAALKRSTGSSLRKKLGLKTTAKEKEREKEREKEKEKEKERKDEKEREREREKEKKGEKHLSATSPASRPPAPQSKGQPQAKAVASPRRPPAPKTDAEKADRLKAFWKERKGQMSRQPGARSKKKGETRVFEMPLSVAVERSCLGDGIELPAVVRKCILYLEECALEQEGIYRLSGSMARIKELRAHFDKGEDINLAGETDPNVVSGLLKLFLRELPETVLTNDLAGEFNEIMGWDDEGRVAALRDLMSELPRANETVLGWLLLHLSHITERSETTKMSPNNLAIVFSPTLKLSQDLCSLMVALGPQIVSDDIAQSFAEALKEHKLEDLERIETLDELLRMRDEMDLLRDGLSRIGTRLWDRIEQERDTQAALQHKLDEAAAVLADIAPPSDGRVAPSVPPAEEDELADSPEDVEKMHLMLTELQLWADDLEQQCTAHCRDLHTERERVARLLVAQTAAVQAATAPSSAQGAR* # PASA_UPDATE: g1758.t1, single gene model update, valid-1, status:[pasa:asmbl_1252,status:3], valid-1 NODE_133_length_36560_cov_43.383 . gene 12532 15687 . + . ID=g1758;Name=g1758.t1 NODE_133_length_36560_cov_43.383 . mRNA 12532 15687 . + . ID=g1758.t1;Parent=g1758;Name=g1758.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 12532 12605 . + . ID=g1758.t1.utr5p1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 12532 12623 . + . ID=g1758.t1.exon1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 12606 12623 . + 0 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 12706 12803 . + . ID=g1758.t1.exon2;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 12706 12803 . + 0 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 12923 13085 . + . ID=g1758.t1.exon3;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 12923 13085 . + 1 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 13251 13378 . + . ID=g1758.t1.exon4;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 13251 13378 . + 0 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 13522 13747 . + . ID=g1758.t1.exon5;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 13522 13747 . + 1 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 13867 14352 . + . ID=g1758.t1.exon6;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 13867 14352 . + 0 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . exon 14587 15687 . + . ID=g1758.t1.exon7;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . CDS 14587 15561 . + 0 ID=cds.g1758.t1;Parent=g1758.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 15562 15687 . + . ID=g1758.t1.utr3p1;Parent=g1758.t1 #PROT g1758.t1 g1758 MHTMTEAHSPSLGVCYYPEQWPRDKWETDAASMRALGIRHVRIGEFAWAVCEPTRNNFRWEVLDDAIEVLGSAGLSVVMGTPTACPPKWLVDEHPDILPVDVNGHVRKFGSRRHYNFSSAAFRRETERIVTAFAERYGGHPAVSGWQIDNEFGCHDTVRSFDCESRECFREWLSHRYRSICDLNSAWGNSFWSMDYASFDEVDLPNLTVTEANPAHWLDYCRFSSDQVVSYAQLQAGIVRRLSPGRFVTTNMMGFFFLYDHFALGDVLDFAAWDSYPLGFTDTAMMPHAITDADKVQYARTGHPDLAAFHHDLYRGVGHGRFWVMEQQPGPVNWANNNPSPAPGMVRLWTLEAIAHGADVVSYFRWRQCPFAQEQMHSGLNRPDYTPDVAYGEAADALEDMRRLQSHLQHPRPAAAPTAISAAATVSASTTTRGDAALVFDYEAAWVLAIQPQGALFSYPELVYIFYCALRRIGLSVDIVSPDADLSVYPVVVVPSSPIVGEHLAAQLAAHPGHVLLGPRTGCKTRDFQIPATLAPGAGVQRSLPVRVVRVESLRAGMSVGVTGHGGLSARAGVWAEWVVPIDSTDASPVDETARFDDGRPAIVANTNAAGGRCHYVAFYPDVAFLSGYVRALLAESAVNAGSGALAASLRLRRRGNVMFAFNYDTTCNAVAPAPAGAQFLVGSRYLAPCDACAWTV* # PASA_UPDATE: g1762.t1, single gene model update, valid-1, status:[pasa:asmbl_1254,status:3], valid-1 NODE_133_length_36560_cov_43.383 . gene 24345 27064 . + . ID=g1762;Name=g1762.t1 NODE_133_length_36560_cov_43.383 . mRNA 24345 27064 . + . ID=g1762.t1;Parent=g1762;Name=g1762.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 24345 24553 . + . ID=g1762.t1.utr5p1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 24345 24642 . + . ID=g1762.t1.exon1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 24554 24642 . + 0 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 24747 24824 . + . ID=g1762.t1.exon2;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 24747 24824 . + 1 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 24974 25135 . + . ID=g1762.t1.exon3;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 24974 25135 . + 1 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 25240 25366 . + . ID=g1762.t1.exon4;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 25240 25366 . + 1 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 25506 25649 . + . ID=g1762.t1.exon5;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 25506 25649 . + 0 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 25795 26005 . + . ID=g1762.t1.exon6;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 25795 26005 . + 0 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 26111 26238 . + . ID=g1762.t1.exon7;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 26111 26238 . + 2 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 26352 26483 . + . ID=g1762.t1.exon8;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 26352 26483 . + 0 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . exon 26634 27064 . + . ID=g1762.t1.exon9;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . CDS 26634 26984 . + 0 ID=cds.g1762.t1;Parent=g1762.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 26985 27064 . + . ID=g1762.t1.utr3p1;Parent=g1762.t1 #PROT g1762.t1 g1762 MEGLSALFAALDGAVEPVGAKLGLPVDQFKYLLCLVLAYPLGFAHKTMPSPTAKHIFSILCGIAFGFVCFGTQMVHTFAVTVATYTLTALRLPRGPQLVFGFNLLYLSACHIYRQVTDYGGYKLDITGPLMILCVKLSSLAFNIEDGRRMEKCTEEQKRYALKTLPSPLEYFGFAFFFGGFLAGPSFEIRDYIVFTNTPNTNLPKDTVTPAAKKFAGAVACMAVFMLSEANPLEYTRTEEFRLEKPLYYRLLYILIAADFKRYQYYFAWTLADGACNAAGLGYTGTDKHGQPQWEGVTNVDIYKLETAQSFKEVTDNWNINTSRWLRRYVYLRLAPEGTKPTFTATMATYLTSAFWHGFYPGYYLMFVSSAFITNVARDIRRHLRPVFMNADGTPRPSKVAYDFFGWLFTQFSLNYVCTIFVLLTIHDSFLVWKSLYFCVHVVVVVLTVFYSQRNKQMARAARKAGAPASKAQ* # ORIGINAL: g1764.t1 original gene structure, not modified by PASA NODE_133_length_36560_cov_43.383 AUGUSTUS gene 30307 33886 . + . ID=g1764;Name=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS mRNA 30307 33886 . + . ID=g1764.t1;Parent=g1764;Name=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 30307 30463 . + . ID=g1764.t1.exon1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 30307 30463 . + 0 ID=cds.g1764.t1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 30632 30776 . + . ID=g1764.t1.exon2;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 30632 30776 . + 2 ID=cds.g1764.t1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 31045 31233 . + . ID=g1764.t1.exon3;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 31045 31233 . + 1 ID=cds.g1764.t1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 31399 31816 . + . ID=g1764.t1.exon4;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 31399 31816 . + 1 ID=cds.g1764.t1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 31918 32651 . + . ID=g1764.t1.exon5;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 31918 32651 . + 0 ID=cds.g1764.t1;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 32752 33886 . + . ID=g1764.t1.exon6;Parent=g1764.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 32752 33886 . + 1 ID=cds.g1764.t1;Parent=g1764.t1 #PROT g1764.t1 g1764 MADKAKPVGKDNKKVQARRTKDTSQLSKKLEHVLVLKRPLPPPPRGDKGPKQDMLSCVVECYPPVPGGIETASPDAVAIFRNVPQFCFPFDTTHTDIIAPENNEMFTFVLTDGDGIQLFGYCRHLVAPVMHVDGTTIECVCVISYLPWFKLFDQVNAAVTNNRRQWKAAVIPLLDAFVAHPMPLPGERMILRPFGMNGKPFTFDCPDTTRLSAMGESTNLTELFTGLDADRILRLFSSLLLERRVIVTANKLSVITSIVHAATELLYPLYWQHVFIPVVPPPLLDYCAAPMPYIIGVHSSLMKRVRSMPLEEVVIVDVDDNAVAQENNDLEVLPAELVASLRETLKKHTSGIDDVVARVFLKFFVALFGPYRDFIAKGHDGTASFLMEELIMSRPKTFTPFLRTFLSLQMFNQFIDERMHMVLQGKEPQSEFDREAERAKRDGKYLGKRISEKLHVVADKTAEATRQAYDRTKESARRKGQEAIKAVAQRTKAVVEKRKESNAADASPTPTPTATPNATPTAVRPPQRPPPPNIGSSGANPHDNGHHGDKTHARSISVDTGTKKAPPIPPRPAFVHAASQDGTALPSLQRTPSMDDMLSLDTVMAVGQCTPGPTVRDGKPRDTDAPTDSVPPVTPQGASSADVFGEPSSSSAAPVMSPLVGLLPPPPSAARSKREVMADRPPPQRQSPRPPSISSAAPPAVPENTVGPQRAATTQSGPGEAPLHNDLQRSHSSPQAPSVTQPQAEAAATGEVAIPRSSSIGRATEPGSVVASVQLGGGASVAPLAGAIAALAAARAPAVVSIDAAHPTLPPPPQSNRSRRLSNPPVSPAPSSAPPAGGLHPQQGHHGHRSQGSGSATRSFDELVQLDSLGKAASGKAPSSPQTPRTSLPAAPASAEATAALPKPPQHAPKIDPNSVSMESFDPFK* # PASA_UPDATE: g1763.t1, single gene model update, valid-1, status:[pasa:asmbl_1255,status:3], valid-1 NODE_133_length_36560_cov_43.383 . gene 27430 29656 . + . ID=g1763;Name=g1763.t1 NODE_133_length_36560_cov_43.383 . mRNA 27430 29656 . + . ID=g1763.t1;Parent=g1763;Name=g1763.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 27430 27885 . + . ID=g1763.t1.utr5p1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . exon 27430 28256 . + . ID=g1763.t1.exon1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . CDS 27886 28256 . + 0 ID=cds.g1763.t1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . exon 28415 28498 . + . ID=g1763.t1.exon2;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . CDS 28415 28498 . + 1 ID=cds.g1763.t1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . exon 28771 29113 . + . ID=g1763.t1.exon3;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . CDS 28771 29113 . + 1 ID=cds.g1763.t1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . exon 29255 29354 . + . ID=g1763.t1.exon4;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . CDS 29255 29354 . + 0 ID=cds.g1763.t1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . exon 29464 29656 . + . ID=g1763.t1.exon5;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . CDS 29464 29597 . + 2 ID=cds.g1763.t1;Parent=g1763.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 29598 29656 . + . ID=g1763.t1.utr3p1;Parent=g1763.t1 #PROT g1763.t1 g1763 MSHQAAVTARSHAQLHTHAPAHTVSNEAQQPHVSHGNSGMHTQGGHDTHRSSLNLHVVPAHGGGAVPHTSEKGARLDVANAAVTRAESTDDDAEDEKFKRRIRLAASLYIFFAALWAYVKGLLRLVTGGKNFGPIALSSQTEYRTSFSPTSGLPMTAPLRYPLSAPSVRKKTLVLDLDETLIHSTVRGLRSRQFDLKIDVVIDRIPCLFYVYKRPHVERFLTAVAAWYNVVVFTASLRQYGDPVIDSLDCGRGLIQRRYFRESCIQEYGNYVKDLSKVEPDLSSVLIIDNSPGAYAMHPENAIPIVAWTKDPDDDALLDLIPFLCYLHAVRDVRSILSLRLRA* # PASA_UPDATE: g1765.t1, single gene model update, valid-1, status:[pasa:asmbl_1256,status:12], valid-1 NODE_133_length_36560_cov_43.383 . gene 35161 36374 . + . ID=g1765;Name=g1765.t1 NODE_133_length_36560_cov_43.383 . mRNA 35161 36374 . + . ID=g1765.t1;Parent=g1765;Name=g1765.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 35161 35453 . + . ID=g1765.t1.utr5p1;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . exon 35161 35499 . + . ID=g1765.t1.exon1;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . CDS 35454 35499 . + 0 ID=cds.g1765.t1;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . exon 35658 35711 . + . ID=g1765.t1.exon2;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . CDS 35658 35711 . + 2 ID=cds.g1765.t1;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . exon 35872 35986 . + . ID=g1765.t1.exon3;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . CDS 35872 35986 . + 2 ID=cds.g1765.t1;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . exon 36287 36374 . + . ID=g1765.t1.exon4;Parent=g1765.t1 NODE_133_length_36560_cov_43.383 . CDS 36287 36374 . + 1 ID=cds.g1765.t1;Parent=g1765.t1 #PROT g1765.t1 g1765 MTSFNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMSDCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRYVYAGCL* # ORIGINAL: g1755.t1 original gene structure, not modified by PASA NODE_133_length_36560_cov_43.383 AUGUSTUS gene 238 4963 . - . ID=g1755;Name=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS mRNA 238 4963 . - . ID=g1755.t1;Parent=g1755;Name=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 3060 4963 . - . ID=g1755.t1.exon1;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 3060 4963 . - 0 ID=cds.g1755.t1;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 1888 2848 . - . ID=g1755.t1.exon2;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 1888 2848 . - 1 ID=cds.g1755.t1;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 1536 1634 . - . ID=g1755.t1.exon3;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 1536 1634 . - 0 ID=cds.g1755.t1;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 1019 1312 . - . ID=g1755.t1.exon4;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 1019 1312 . - 0 ID=cds.g1755.t1;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS exon 238 831 . - . ID=g1755.t1.exon5;Parent=g1755.t1 NODE_133_length_36560_cov_43.383 AUGUSTUS CDS 238 831 . - 0 ID=cds.g1755.t1;Parent=g1755.t1 #PROT g1755.t1 g1755 MSGRRAPTPTRRPPSASASAVGSGTINASSGSSGTPKRPTSALTAATNSLAASGQAAAAPLGSSIRIQKGPVEDFSGPLLLSSKAVPIKPRAAGGALGASGSFGASSYGRSDEQAGGSTNAHASIKASRPSSKADGGHAQPHAPTFDDGFSLVGSAVSVSTGARPSSAAKSRNAPTPSQSAYTATAAQFASPARSTASSVRSSAATHSTAQPSSTPQSPRRSVTFADGIAPPPDASNAAVYSGAHIDDEYDDGLTGALSGDADGSDAHLRYGDDVSLSDFQDDAVHSDVDEAAVRAALESQGKAGDFNPRALRGSAAVGMTQTLKKYMGAKKAREEQERNAERVQQLLQDKKRAIEVARAGEEDERRTAEKERVAEEKAREKKKEDRARSQRMDAIRELRQHREAKRAAAESAIAAEAAPTTARDREKSRADGDSEVDSVHSTSRDARQSRDASAALGEKGVRGSEHSAPAAAARNSRSERIARAAEERLGSRVLAEVTPESPPPASHRTAAKDAEQAKQSAWRAMSREFETARASAMSPTRSHIRAALATEMDEVDDGEGVPANRVLSRPSSRGGFFDGGRAVASSIVAMTEERRSMDRPAILDHRSLSVSPPPAFDREREGEFDAPALGTIKPVLGGASTKEDDRSSVSRGSSRDKSKSDGSMQRTGKSREDFLPTGVTTVADDTSTRAFLSATKLQNVMAYLDEVERTADDDALSVLSSQPRSTAGGLSVGQLRAHSRHHEPEPIDELDMMDTASHAGASAVYQGSDVQSTIVSQKLELDDKRKTIEMLRGALQAHRERSRAEQSEREKEERTRLQAQKGEYEGIVKRHLAFIDQLIGDKKALSERCEQLVEELKSCEKKFGARITALEESHARELKKTKEGIIAAEKIKREEWVNDRTKQIKEITIKGLEPEIQRMIAKHKQETKALGAKHADEMARQKDEMQRLHDRAIEDLRLRAESEREEALVKERDSQRSRAQKNVEQLESDWQQQRRRLMAERDAERADNDRKWREEKEKLDKMIEQLKEGVENAEETVRRRFAIELKDVRAAMEIEKSQWQDQMMHRNEQLVRQREQELRERLKKERDKEIEAVIARLEEETSGSATDLQKRHQSELKAVREKLEAELARAEKSERSISDKYIEARDKLAATEREALAVRQQLEELKGEHGDAKRQLNKLQSERDRMAEKIREEFADRLASYQEDVRRTRGDMEELRKAHAKELQEMQRAKEGELDALHGRVRAAMQKRDDAARTLREQLQEAELKVTHLEKMLEKQRRELLA* # PASA_UPDATE: g1759.t1, single gene model update, valid-1, status:[pasa:asmbl_1262,status:12], valid-1 NODE_133_length_36560_cov_43.383 . gene 15725 17655 . - . ID=g1759;Name=g1759.t1 NODE_133_length_36560_cov_43.383 . mRNA 15725 17655 . - . ID=g1759.t1;Parent=g1759;Name=g1759.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 17596 17655 . - . ID=g1759.t1.utr5p1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 17318 17655 . - . ID=g1759.t1.exon1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 17318 17595 . - 0 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 17181 17226 . - . ID=g1759.t1.exon2;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 17181 17226 . - 1 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 16880 16994 . - . ID=g1759.t1.exon3;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 16880 16994 . - 0 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 16689 16766 . - . ID=g1759.t1.exon4;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 16689 16766 . - 2 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 16295 16407 . - . ID=g1759.t1.exon5;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 16295 16407 . - 2 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 16104 16196 . - . ID=g1759.t1.exon6;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 16104 16196 . - 0 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . exon 15725 15902 . - . ID=g1759.t1.exon7;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . CDS 15768 15902 . - 0 ID=cds.g1759.t1;Parent=g1759.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 15725 15767 . - . ID=g1759.t1.utr3p1;Parent=g1759.t1 #PROT g1759.t1 g1759 MRTIDKAAVDGAPKDPPFASLFTVHRVRRPFGPAHTAFAVYCVLVGLPLLVLRLLLLVPVHVAFVLLPAPVDRIFLRASLAVCFGWIVRTHNRNAYPPSPIISSNHSSELDGYSMHCLGSFQQLTAFPYYSILPKKLGLIFVKTSPDRREELREQIRDRLKRDKRPLISFSEGGFTNGRVGLMVYNKFLFGLGLAVQPVSIRVWNPWPIEHDRLGSTNIKNFLFIGLMPFLVVDVKFLPPVSITEGETDADFAARVQGIVARDIGVQATGHMYKSKAALARSLYG* # PASA_UPDATE: g1760.t1, single gene model update, valid-1, status:[pasa:asmbl_1253,status:3], valid-1 NODE_133_length_36560_cov_43.383 . gene 18003 22199 . + . ID=g1760;Name=g1760.t1 NODE_133_length_36560_cov_43.383 . mRNA 18003 22199 . + . ID=g1760.t1;Parent=g1760;Name=g1760.t1 NODE_133_length_36560_cov_43.383 . five_prime_UTR 18003 18060 . + . ID=g1760.t1.utr5p1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 18003 18427 . + . ID=g1760.t1.exon1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 18061 18427 . + 0 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 18630 18812 . + . ID=g1760.t1.exon2;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 18630 18812 . + 2 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 18995 19142 . + . ID=g1760.t1.exon3;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 18995 19142 . + 2 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 19361 19487 . + . ID=g1760.t1.exon4;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 19361 19487 . + 1 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 19596 19794 . + . ID=g1760.t1.exon5;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 19596 19794 . + 0 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 19983 20032 . + . ID=g1760.t1.exon6;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 19983 20032 . + 2 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 20191 20338 . + . ID=g1760.t1.exon7;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 20191 20338 . + 0 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 20484 20586 . + . ID=g1760.t1.exon8;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 20484 20586 . + 2 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 20703 20895 . + . ID=g1760.t1.exon9;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 20703 20895 . + 1 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 21025 21200 . + . ID=g1760.t1.exon10;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 21025 21200 . + 0 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 21356 21439 . + . ID=g1760.t1.exon11;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 21356 21439 . + 1 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 21582 21681 . + . ID=g1760.t1.exon12;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 21582 21681 . + 1 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . exon 21832 22199 . + . ID=g1760.t1.exon13;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . CDS 21832 22098 . + 0 ID=cds.g1760.t1;Parent=g1760.t1 NODE_133_length_36560_cov_43.383 . three_prime_UTR 22099 22199 . + . ID=g1760.t1.utr3p1;Parent=g1760.t1 #PROT g1760.t1 g1760 MAQEAISLAITIAKTIYKMTEEYREQDERLGELVGRINSLEQPLNVLNKQSENLTVYKDALIKLVRLLQECQLFIDEQIKDMIKTKVMKFLRGTAKLERFSELNRQLDSCQLDLQTAVQAEEAVRSEARVHETASATVDLLTQEKIKRANEALRPCVQCGQDYRESVNPEGGCKFHSGFPLVNYGKRDMTCCNKSIPEKEAFETGCVLGRHTSKHHSRYSYAAFYKFCQSLHRDEKEEYARAEKNDFEDSMAKAARCGTMEAESPSGEFYVALMKGNFVLFLQRYGQEEAAALAAEAKRIVAGVIPIGARGTDELPGPLEQAGETKWRSWAEFIVANGAVTAIRLYAKSLSHNSPAVKEVPISVFPPQKLGEAKSLSNEVSARPSLQFYTLPPKVEVFKPFPPHVFHEPPPQENPATVTTGGLPLRLKRNGDLICNYVNGNAFDSFDLDVSLMNTGHGERKGASHEERLSVLTMLKEGKISVDESLRLLAALEDGATLDGPIRIIEVRAEALLNGVWTPAMEVRFIDEKISFPIEVRPQDMTRFSVRAFVKAEGKRDTAGGWGRSAYIARFEPVHLRFIFEEFSGKIASTSIVFQNPAQKFAEKKEDDIAFISCDVLDKWYRSFVRFTKPDDEGALFKISIDDCRSFTVQPVDVEQWAYSAKKANSSEFRLEFLCECQWEAHAVVDIKAGIAYAIKFETKREGGVHVVDHVRLQ* # ORIGINAL: g12742.t1 original gene structure, not modified by PASA NODE_6545_length_549_cov_311.323 AUGUSTUS gene 1 549 . - . ID=g12742;Name=g12742.t1 NODE_6545_length_549_cov_311.323 AUGUSTUS mRNA 1 549 . - . ID=g12742.t1;Parent=g12742;Name=g12742.t1 NODE_6545_length_549_cov_311.323 AUGUSTUS exon 1 549 . - . ID=g12742.t1.exon1;Parent=g12742.t1 NODE_6545_length_549_cov_311.323 AUGUSTUS CDS 1 549 . - 0 ID=cds.g12742.t1;Parent=g12742.t1 #PROT g12742.t1 g12742 TPTEGTVTFAEGATEGTIEISIVSDTTPELAESVSIALVGVSGGGRLSTDSTSVSVEIQESDDARGVFAIAGSSLSQRVSEEDVDGKGSVVALLIVRTGGAFTEQTILWTTEGPAGQFSPTSGSVSFGDGVVEMTVLISVLADDVPELDQTVAFGLTEVVGGGRIDENGVAGAFTILENDDAR # PASA_UPDATE: g4065.t1, single gene model update, valid-1, status:[pasa:asmbl_7979,status:12], valid-1 NODE_5296_length_920_cov_85.5586 . gene 1 920 . - . ID=g4065;Name=g4065.t1 NODE_5296_length_920_cov_85.5586 . mRNA 1 920 . - . ID=g4065.t1;Parent=g4065;Name=g4065.t1 NODE_5296_length_920_cov_85.5586 . exon 1 920 . - . ID=g4065.t1.exon1;Parent=g4065.t1 NODE_5296_length_920_cov_85.5586 . CDS 1 920 . - 0 ID=cds.g4065.t1;Parent=g4065.t1;5_prime_partial=true;3_prime_partial=true #PROT g4065.t1 g4065 SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAAQSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEATGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI # PASA_UPDATE: g751.t1, single gene model update, valid-1, status:[pasa:asmbl_474,status:12], valid-1 NODE_1124_length_13776_cov_43.4767 . gene 9018 9402 . + . ID=g751;Name=g751.t1 NODE_1124_length_13776_cov_43.4767 . mRNA 9018 9402 . + . ID=g751.t1;Parent=g751;Name=g751.t1 NODE_1124_length_13776_cov_43.4767 . five_prime_UTR 9018 9042 . + . ID=g751.t1.utr5p1;Parent=g751.t1 NODE_1124_length_13776_cov_43.4767 . exon 9018 9402 . + . ID=g751.t1.exon1;Parent=g751.t1 NODE_1124_length_13776_cov_43.4767 . CDS 9043 9402 . + 0 ID=cds.g751.t1;Parent=g751.t1 #PROT g751.t1 g751 MDLRDEDENIRFRMPPPVRTDEFGKEVREVAWNDYDTQLKDAIRHRQGDLRAVYASRQKALDELKKLRSSRRSAKEMISKIEKERDKAVATRNRLREVSGRGRYHSYATPWKTSVACTS* # ORIGINAL: g750.t1 original gene structure, not modified by PASA NODE_1124_length_13776_cov_43.4767 AUGUSTUS gene 6983 8113 . - . ID=g750;Name=g750.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS mRNA 6983 8113 . - . ID=g750.t1;Parent=g750;Name=g750.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 6983 8113 . - . ID=g750.t1.exon1;Parent=g750.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 6983 8113 . - 0 ID=cds.g750.t1;Parent=g750.t1 #PROT g750.t1 g750 MATRTKGDSALEQGKAPKVPQDTHAAASRGSQLPASLPESTYNNESKATPRINQYTPGHQLGDDSDDAYSSDDSCTELPPEPVVCAPFIMQLRDVLSGLDFVVCRYEKEREYVEARVREMSQETSAISRRIRSALSTTERAKNQADAYAVALKQLRSFDDPSVIASVTESEEDVQERRYGQFKYEEIGLEIADMERRLRELTWAVRWKQQVTWARQSRNSEVEASLLTHDAIQRFRTVLRSEITYVRDTSDVPALFGCTPRLSERARVVGKTLEAAGVGMQSEFSSGVRSTMSAYVSRSVRDNDYYYHDVPPADSDSDQAADEGGWSAEEYYGDEYEDAAEDGNEGDAYYAEQSTAARSTGLTDIDENGEIHTGAN* # ORIGINAL: g752.t1 original gene structure, not modified by PASA NODE_1124_length_13776_cov_43.4767 AUGUSTUS gene 9453 11114 . + . ID=g752;Name=g752.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS mRNA 9453 11114 . + . ID=g752.t1;Parent=g752;Name=g752.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 9453 11114 . + . ID=g752.t1.exon1;Parent=g752.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 9453 11114 . + 0 ID=cds.g752.t1;Parent=g752.t1 #PROT g752.t1 g752 MEAFGTAEAASSGRQTLPDVGRLGCHVDPDTFAIRYILGPPRVISASEWEESVAFYSLPSGDALLGEKIHALARRLGTASPEDCDGVNSDGERGEDKKTTIDLEIAVRQLQEGHPSGRMYNGHMWYSSHHEEYLLFDLLAPDALVCTGNYIVPQEEDAEARGVGWYSTRHVLAAYDRREAALCARLRTSVSIPPPYFLYPVASIIMPNDGLHCRVLYSRSREFLRRQIDKTDVDSAHVLTVRGRLQIASDIANAVVHMLEGPSSDTSPWQPIVHTDLCSSRTIVTEVDPSSGLMRAKIFGFGFGAVLPLGLPADKAVLASQLQETGNATDTLKGIGYTDIRSHVLDSTSMCPAFVESGVISRATDVYSLGILILELLSGLARRLKVSVITEEETSKNAAAGEKIGGSQHEDGAQYEGQQGGTAPSGKKKKKKSKKINLGNLAIQDSRLGLLAKRRSLWFCKYAGTWKALSVGKRDFGMEVLRVAARCVSDCLNDRPSAREVARVVDDALRLAIAQHPEDVGVLGRMDACSSIEEEIAEDDKTDEQAISGGELD* # PASA_UPDATE: g753.t1, single gene model update, valid-1, status:[pasa:asmbl_475,status:3], valid-1 NODE_1124_length_13776_cov_43.4767 . gene 11506 13530 . + . ID=g753;Name=g753.t1 NODE_1124_length_13776_cov_43.4767 . mRNA 11506 13530 . + . ID=g753.t1;Parent=g753;Name=g753.t1 NODE_1124_length_13776_cov_43.4767 . five_prime_UTR 11506 11724 . + . ID=g753.t1.utr5p1;Parent=g753.t1 NODE_1124_length_13776_cov_43.4767 . exon 11506 13530 . + . ID=g753.t1.exon1;Parent=g753.t1 NODE_1124_length_13776_cov_43.4767 . CDS 11725 12900 . + 0 ID=cds.g753.t1;Parent=g753.t1 NODE_1124_length_13776_cov_43.4767 . three_prime_UTR 12901 13530 . + . ID=g753.t1.utr3p1;Parent=g753.t1 #PROT g753.t1 g753 MEADDESAGLHGSSSSSDDLSYTAGTTNADNTGSGTTAKVRAAFNDWCSREYSGVDDSDSDTYSPDTLKERVKDPRFRRIRRVNKKFREVVRLRTDISGACLDDLNRLHVMLLAVRRDLVAAEAEIRARLDEADSLHTGDVHLYKHLRREFLSRLVGVQRVGTVARDVWPCGGGGGVDIQRDNSETVFHRVIAHVPSARAKRMQPNAAGAVPARNAQTDVGKDGKISDVSNNVSPWSKSSSERPPEKFDDNVAPAPAPAPKATSSCEPASADVKGPSGERDRRSTRTPSSSSGASPDGTMDLMRQSENKKKANDIEGPLTPAETGSEGGGSGGSRESTGEFPKGANGGHISRRERKVTDSTHSTAPYVDAKLPLTPDPSPQKKIARAIVLA* # ORIGINAL: g749.t1 original gene structure, not modified by PASA NODE_1124_length_13776_cov_43.4767 AUGUSTUS gene 1642 6339 . - . ID=g749;Name=g749.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS mRNA 1642 6339 . - . ID=g749.t1;Parent=g749;Name=g749.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 1642 6339 . - . ID=g749.t1.exon1;Parent=g749.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 1642 6339 . - 0 ID=cds.g749.t1;Parent=g749.t1 #PROT g749.t1 g749 MEPHVDPPRVGGGRLPLNEKTGRIDLFHAMQEMEPSPVFLQSAGLTLAYEQSQMTCVLDLIKDYVEAGALVKDELVDIRKRGESIVDDASRLLLRAAHITEVDEVCANPATEINLGQMGGHDTSDARIRDMEAAAREFGRLLAEKMPAAFAEMRDLKMSAEMTQLLLQLIAEDGQPSEFHETPYYSPVTSKGRRVGGDGGEGDDNGPDAGYTHENGDPIPHKTARERMVDHVARLISAMAEKEGITVPRALLELEQAYAQLLTQRESSVSVLSDIIATKNRIENMLDEMDDVHVTGLDTSREAMHHPLEQPWTYATVGDARYAVAPPEEDVRHRRQKGLVGEAESMKNLEIRKKYDARRAKKAAKGSPSPKAAKAVSGETPNGNETPTGAIPDASKGDAGEERTDSAVTKATAQAPSTAMGAKDAAPANPSVQRAMPHVHHVYKALSGGAAIGVQDTDRKEANDQAHRSPAAKKGDEDNHGPNNHNHNSSSSSSSSNDTAVKTVSTASEALPPPAQSVHVVQSQPKISPSSTHTVTTTTAVPVASSSATPSSTSRDNGVIRGSSAKTPQQSPSKTTAVNQDLPSTAPVANGSAQTTHTRGMGVRAGSNPTSSQQNEGVSAQQSAQANEHSLLSQSTRVTGGLRDVRSGSHGDTPATSQQRPTIPANTSVATGTSTLDSAFEIHVMGPASAGSTGSSYISEGSIRRQSATFNNSAQTTHEKMNSTDARSVAKTTTGHSRADNGANTVVHRGAVTAALETEHKPDVGNGTYQVAARGPSGSTECANQQFTGASAVRQHNHAAAGREGAQEGVGDATWVVRTLNAGEPIEGFPWANADFGWNKSVNTLQSTYEANKDAQIARNEEDELLNGVEFTHPPRAPAPHRQPAQHAEPALPAGNLPDAHGLPPGCTWVMDDGRPLSPVMPRPQHVLDQHPINCLTDASSKYSLHSWKGLRMFLSRFDDTQERVEYARMQCKSDDKWRKNEGDIRRVPYVDEIEPPPWCLVDSQVRTVQMDKALYMRALVMETRMRTLVELVGSIASSMTKVANDAQNTKKVDLVDLFAVRKLSEDVQKYALGVCDTDARRFFQMLYGHPTVFAHDHEGRPRPNPLALHIPVRIVRSDGEAFIAEGTGRTVPETEYFDRLRDAWQAGEFEPKEGETPRPWADYIGANMGPYLHDPPEEAGVVAPFILTDQAAAAGGLTGNGVSAAAGKSFPPPGFIELPEGLSEKAKLAFMMEHARAQQAAAKAREVENVNDDGGVDALRKFVPRERRVEKHSSLPMTPRGDREGRNRAERSHPMMAADAASMPPAPTFPPKGSTGADAHEGSSHAYGGTDTDAQRLSLDMLLSDALRMGDVWANGAGLSAAADADGEQQPIDGKNHAIVDDTAEVANSKSRGANRHHMHHGTSDVGDPTRAVGAARPRATGVDGSINKGGTFDVNTAARAGAGVTPVHAVSAIHNNGDPAAGVDGGNEQARAPRGFNLKPSSREFDANGRRVAGINASNQHGVGALDTRNLPRARALGPSFEQARAAAAVPASMDGSASAVDAHDAVMPVREERANQAPSCSS* # ORIGINAL: g748.t1 original gene structure, not modified by PASA NODE_1124_length_13776_cov_43.4767 AUGUSTUS gene 334 1243 . - . ID=g748;Name=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS mRNA 334 1243 . - . ID=g748.t1;Parent=g748;Name=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 1178 1243 . - . ID=g748.t1.exon1;Parent=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 1178 1243 . - 0 ID=cds.g748.t1;Parent=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 740 877 . - . ID=g748.t1.exon2;Parent=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 740 877 . - 0 ID=cds.g748.t1;Parent=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS exon 334 528 . - . ID=g748.t1.exon3;Parent=g748.t1 NODE_1124_length_13776_cov_43.4767 AUGUSTUS CDS 334 528 . - 0 ID=cds.g748.t1;Parent=g748.t1 #PROT g748.t1 g748 MEVKASTLKDAKAEVNVRVAVRVRPFVTKEKLQRRMECVKAHSDRKQIVIGKDKAFTFDHVFGPSTTQSEIYETCVEFLVTSCFEGYNATVFAYGQTGSGKTYTMGSGNLEGIGEEAVGIIPRAVRQIFDTLE # PASA_UPDATE: g9476.t1, single gene model update, valid-1, status:[pasa:asmbl_971,status:12], valid-1 NODE_1255_length_12675_cov_38.568 . gene 177 1215 . - . ID=g9476;Name=g9476.t1 NODE_1255_length_12675_cov_38.568 . mRNA 177 1215 . - . ID=g9476.t1;Parent=g9476;Name=g9476.t1 NODE_1255_length_12675_cov_38.568 . five_prime_UTR 785 1215 . - . ID=g9476.t1.utr5p1;Parent=g9476.t1 NODE_1255_length_12675_cov_38.568 . exon 397 1215 . - . ID=g9476.t1.exon1;Parent=g9476.t1 NODE_1255_length_12675_cov_38.568 . CDS 397 784 . - 0 ID=cds.g9476.t1;Parent=g9476.t1 NODE_1255_length_12675_cov_38.568 . exon 177 202 . - . ID=g9476.t1.exon2;Parent=g9476.t1 NODE_1255_length_12675_cov_38.568 . CDS 177 202 . - 2 ID=cds.g9476.t1;Parent=g9476.t1 #PROT g9476.t1 g9476 MASATQNMTHGNGHTPTSSRGGADSVSSPTRASANMLGPTTSMTPRATADASRSGGANVSPRSQPGTLNTNGAAVNTPPTPTSASSSKPQSPTSDAPETIGVYSVDRTLGQGSYGKVKLGQHTRTGQKVFSAAAKST* # PASA_UPDATE: g9477.t1, single gene model update, valid-1, status:[pasa:asmbl_970,status:3], valid-1 NODE_1255_length_12675_cov_38.568 . gene 6024 11369 . - . ID=g9477;Name=g9477.t1 NODE_1255_length_12675_cov_38.568 . mRNA 6024 11369 . - . ID=g9477.t1;Parent=g9477;Name=g9477.t1 NODE_1255_length_12675_cov_38.568 . five_prime_UTR 11227 11369 . - . ID=g9477.t1.utr5p1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 11087 11369 . - . ID=g9477.t1.exon1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 11087 11226 . - 0 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 9607 10175 . - . ID=g9477.t1.exon2;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 9607 10175 . - 1 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 9218 9348 . - . ID=g9477.t1.exon3;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 9218 9348 . - 2 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 8707 8959 . - . ID=g9477.t1.exon4;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 8707 8959 . - 0 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 8409 8441 . - . ID=g9477.t1.exon5;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 8409 8441 . - 2 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 8092 8189 . - . ID=g9477.t1.exon6;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 8092 8189 . - 2 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 7645 7893 . - . ID=g9477.t1.exon7;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 7645 7893 . - 0 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 6744 7475 . - . ID=g9477.t1.exon8;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 6744 7475 . - 0 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . exon 6024 6623 . - . ID=g9477.t1.exon9;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . CDS 6273 6623 . - 0 ID=cds.g9477.t1;Parent=g9477.t1 NODE_1255_length_12675_cov_38.568 . three_prime_UTR 6024 6272 . - . ID=g9477.t1.utr3p1;Parent=g9477.t1 #PROT g9477.t1 g9477 MARSVLVALVLVGLSLGAIATHLGLESNRHGGQPLRSKGAKFVDLSKPTDVDPEVDCGLKVAAWDYARQILPERGVLASVFDGLQLGVTCGMDRPSDVSAASVRADVLGAAKQYYVPNHATAGVSLYVDPVAGKDAIGRGALSSPFKTISFALAQSRGLRPTLADGATIQLVLRGGLYNVPHTIKIGADDSYLDIGAYGDEEPVLSGSCVLGKLAWRKVASPPAKHVGDGAIYVADVSSHNCGQFDTLFVNGRRAVRARYPNGNPETTGLHTNPTGYISQAKSWLPQNTYPAATEIHIDNPSRRNHFPTFAVGIGGSVVQFDPPVSYFATQAPVGGGAGTYGVPGGLEYNVEDLPDRSYAHPEVGIVHAFHYHHWGGWQFRIDSHNETANTFQWTYGGFQEARGEPLGGTEYFIENLLEELDAPGEWYLDYKTNNLYYYPNSTNFQSAVYTASGLETIIRIEGDKKEPVRNVSIHGLTFTQTAPTFMKAYEAPSGGDWSVHRGATLFIEGCEFATVAGNTFNATGGNAVFLSNYNRGAVVARNEFFLLGDSAIVAVGKMQLNDGTNGDQPRGSLIEGNIARDFGVYSKQVCGFVQSLACETTVRNNVFFNGPRAGINFNDGFGGGNLVQGNLMFNLVRETSDHGPFNSWDRVPYLHDLNDDGVATLMPHMSNVTGNFLFNNYNSVWPIDHDDGSMYYYDTKNVLVYGGYKNFLGHHQTVVNNVYIFPDAFYETKLMSRPFCLDSLWGQYGDSGYSNVWANNVCMLSAPQAVAYTISPCDENDTYGVIPFTSSNSFYTPNGTVTIPCGSVDWDINRATEHGYDIGSHVQELPTSGDIVKMVRDFLKIESPQG* # ORIGINAL: g2960.t1 original gene structure, not modified by PASA NODE_7025_length_479_cov_41.5644_potentialcontaminant AUGUSTUS gene 44 417 . + . ID=g2960;Name=g2960.t1 NODE_7025_length_479_cov_41.5644_potentialcontaminant AUGUSTUS mRNA 44 417 . + . ID=g2960.t1;Parent=g2960;Name=g2960.t1 NODE_7025_length_479_cov_41.5644_potentialcontaminant AUGUSTUS exon 44 417 . + . ID=g2960.t1.exon1;Parent=g2960.t1 NODE_7025_length_479_cov_41.5644_potentialcontaminant AUGUSTUS CDS 44 417 . + 2 ID=cds.g2960.t1;Parent=g2960.t1 #PROT g2960.t1 g2960 DGGAVALFENASSRISSSDFVSCGAAGKGGGLMVAGGAQADMTAGRIIASASGFDEQTPLLFYECRVCLECRRARRRTLPRYRHLSYHHRVLLSQQPDHLRWWGRGRRDRAHVGVHKRPDCLS* # PASA_UPDATE: g13830.t1, single gene model update, valid-1, status:[pasa:asmbl_4029,status:12], valid-1 NODE_2316_length_6755_cov_43.8082 . gene 1755 2975 . - . ID=g13830;Name=g13830.t1 NODE_2316_length_6755_cov_43.8082 . mRNA 1755 2975 . - . ID=g13830.t1;Parent=g13830;Name=g13830.t1 NODE_2316_length_6755_cov_43.8082 . exon 2118 2975 . - . ID=g13830.t1.exon1;Parent=g13830.t1 NODE_2316_length_6755_cov_43.8082 . CDS 2136 2975 . - 0 ID=cds.g13830.t1;Parent=g13830.t1 NODE_2316_length_6755_cov_43.8082 . exon 1755 1886 . - . ID=g13830.t1.exon2;Parent=g13830.t1 NODE_2316_length_6755_cov_43.8082 . three_prime_UTR 2118 2135 . - . ID=g13830.t1.utr3p1;Parent=g13830.t1 NODE_2316_length_6755_cov_43.8082 . three_prime_UTR 1755 1886 . - . ID=g13830.t1.utr3p2;Parent=g13830.t1 #PROT g13830.t1 g13830 MAAKPPRLRVLCLHGKTQSAKYFHERTGALRRACKDVCDFVFVSGPFPVDSAGPSFASLAAINASASGETSALSAGRPGGTATVASIHASDETSAGGDTANDDTTNPVHNHGDNGDNGEKQRESYAWWPSHAEEDVISGVETSLTSLAAVAAEKGPFDGIFAFSQGSSLCALLCAAIENGDERVAPLASIRFVVLCAGFRSRATAHAHHYAPGRFRVPSLHVYGTADRLVPAAESHALSSCFASPEIFTHGGGHMVPFKSADSKVLASFMRRFMHPALC* # ORIGINAL: g13829.t1 original gene structure, not modified by PASA NODE_2316_length_6755_cov_43.8082 AUGUSTUS gene 230 881 . + . ID=g13829;Name=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS mRNA 230 881 . + . ID=g13829.t1;Parent=g13829;Name=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS exon 230 270 . + . ID=g13829.t1.exon1;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS CDS 230 270 . + 0 ID=cds.g13829.t1;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS exon 375 493 . + . ID=g13829.t1.exon2;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS CDS 375 493 . + 1 ID=cds.g13829.t1;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS exon 614 661 . + . ID=g13829.t1.exon3;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS CDS 614 661 . + 2 ID=cds.g13829.t1;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS exon 853 881 . + . ID=g13829.t1.exon4;Parent=g13829.t1 NODE_2316_length_6755_cov_43.8082 AUGUSTUS CDS 853 881 . + 2 ID=cds.g13829.t1;Parent=g13829.t1 #PROT g13829.t1 g13829 MATTDILMPAAPPLSLLVLDRPESTWRHYDSMAGSNRGCARQMAVRLAPLFGGEASLAFKEQRCVQQANVVESMRHSA* # ORIGINAL: g12425.t1 original gene structure, not modified by PASA NODE_989_length_15035_cov_39.6568 AUGUSTUS gene 3482 6817 . + . ID=g12425;Name=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS mRNA 3482 6817 . + . ID=g12425.t1;Parent=g12425;Name=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 3482 3905 . + . ID=g12425.t1.exon1;Parent=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 3482 3905 . + 0 ID=cds.g12425.t1;Parent=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 4034 4213 . + . ID=g12425.t1.exon2;Parent=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 4034 4213 . + 2 ID=cds.g12425.t1;Parent=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 4311 6817 . + . ID=g12425.t1.exon3;Parent=g12425.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 4311 6817 . + 2 ID=cds.g12425.t1;Parent=g12425.t1 #PROT g12425.t1 g12425 MAHFRKAILAMVVIVMAMSASCRAANDAENENGTVSVVSYDMLKSSSDHDDGNWQGGYVIQITHARIAIITPKSVTFSDLKGNKMPCYNMKTSGAFSVFCTVPAWSPEWRCSSNLETSGWIAITVQGTKEQLVITRGWSYNYKCLNDKYYCSVDCGGWYQCKKGVISKQRVGCGSGKPYCSKAGPLVLGPPCTAQSSVCYADYAAPASSTVPAPRTTSQIKASSSIIGTTIYTSASAVPTTSALPKSSSATPFESSSAAPVETSSAAPETSSAAPIESSSAAPIESSSAAPIESSSVAPIETSSAAPVESSSAAPVETTSAAPIESSSAAPIESSSAAPIETSSAAPVESSSAAPVETSSAAPIESSSAAPVETSSAAPVESSSATPVETSSAAPVESSSVPVETSSAAPVETSSAAPVETSSAAPVESSSAAPIESSSAAPVKTSSAAPVETSSAAPVESSSTAPIESSSAAPIESSSAAPVETSSAAPIESSSAAPVKTSSAAPVETSSAAPVESSSTAPIESSSAAPIESSSAAPVETSSAAPIESSSAAPVKTSSAAPVETSSAAPVESSSTAPIESSSAAPIESSSAAPVETSSAAPVESSSAAPVESSSAAPVESSSVQVETSSAAPVESSSAAPVESSSAAPVESSSVPVETSSAAPVESSSAAPVESSSAAPVESSSVPVETSSAAPVESSSAAPVESSSAAPVESSSVPVETSSAAPVESSSAAPVESSSAAPVESSSVPVETSSAAPVETSSAAPIESSSAAPIESSSAAPVESSSAAPVESSSAAPVESSSAAPVESSSVPVESSSAAPVETSSAAPVETSSAAPIESSSAAPVETSSAAPIESSSAAPVETSSAAPVETSSAAPVETSSAAPVETSSVPVETSSAAPVESSSAAPVETSSAAPVETSSASDTTTQSSATATQTAVPVTATDPYIPTAEPYTSSSPTALASANSTEKGTIFVVLIVIAVFVVAGVAALLSFLACGGCCFGAGRRGRKDKKNTHELEAIHVPSADAQALPGSDANV* # ORIGINAL: g12428.t1 original gene structure, not modified by PASA NODE_989_length_15035_cov_39.6568 AUGUSTUS gene 12800 14841 . - . ID=g12428;Name=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS mRNA 12800 14841 . - . ID=g12428.t1;Parent=g12428;Name=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 14689 14841 . - . ID=g12428.t1.exon1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 14689 14841 . - 0 ID=cds.g12428.t1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 14310 14492 . - . ID=g12428.t1.exon2;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 14310 14492 . - 0 ID=cds.g12428.t1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 13941 14100 . - . ID=g12428.t1.exon3;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 13941 14100 . - 0 ID=cds.g12428.t1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 13668 13760 . - . ID=g12428.t1.exon4;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 13668 13760 . - 2 ID=cds.g12428.t1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 13345 13531 . - . ID=g12428.t1.exon5;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 13345 13531 . - 2 ID=cds.g12428.t1;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 12800 13106 . - . ID=g12428.t1.exon6;Parent=g12428.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 12800 13106 . - 1 ID=cds.g12428.t1;Parent=g12428.t1 #PROT g12428.t1 g12428 HVAAIAASARRLNPVWQRDVDLPVPLDEIAVVIEHFCDDSALAKDELAQIKEFRTLLVASLDRRAYPVGKPLSPPNEWTHREILSLVDDIVGHERDVLLGHRALDDAEMKLKTSPDDPLSRIVAHFMSLYDVNSIANVLPVMNHGYQRLSELQNCLAAVKNTLRLSENASPHAIVRSIASLQTAARVVVPVGELHGADEGEGVVVQSLDSVESSNVMPPGIQKPTKQERTQRHDAATDGGAKEDTKEGTVPVPASIMAAVLERLDDYDRFFPTCRDVIRQAMTLLGVDKVADIAPALEMLRATADYSSRAVPVWKAGLEGDGVGGRGGGGGGDGGHGDRMHRASVGGHGGDVDDDPNSTD* # ORIGINAL: g12426.t1 original gene structure, not modified by PASA NODE_989_length_15035_cov_39.6568 AUGUSTUS gene 7383 10221 . + . ID=g12426;Name=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS mRNA 7383 10221 . + . ID=g12426.t1;Parent=g12426;Name=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 7383 7450 . + . ID=g12426.t1.exon1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 7383 7450 . + 0 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 7629 7777 . + . ID=g12426.t1.exon2;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 7629 7777 . + 1 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 7974 8151 . + . ID=g12426.t1.exon3;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 7974 8151 . + 2 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 8549 8651 . + . ID=g12426.t1.exon4;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 8549 8651 . + 1 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 8870 8998 . + . ID=g12426.t1.exon5;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 8870 8998 . + 0 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 9325 9522 . + . ID=g12426.t1.exon6;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 9325 9522 . + 0 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 9809 9946 . + . ID=g12426.t1.exon7;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 9809 9946 . + 0 ID=cds.g12426.t1;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 10120 10221 . + . ID=g12426.t1.exon8;Parent=g12426.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 10120 10221 . + 0 ID=cds.g12426.t1;Parent=g12426.t1 #PROT g12426.t1 g12426 MAPPNSLFPPWQDNEIRFDTVESNLKARDGERIIDYLDAVEDTKGNNGEMGRLTVTNLRLIWHAEARPFINLSIGLNNVLSVTTKTAQSALRGETQALFVLTKHNSTRYEFIFTNLVAHNPRLFTTVQTVHRAYDTSRMYRELKLRGSIIRDKQLVVLPAEQIYDKVVGVWNLSNDQGILGSFVITNVRVVWHANINENFNISVPYIQMRAVRTRELKYGLSMAIITSMDSGNYVLAFRVDPPERLKEVAKQIKNLYKVCGASPVFGVFYEVDDPSISANSSVVQSGERPNADEEDEDADEDGVIDDGVDPLAAYYADNNKVGEGRVVTHPGLGLAIEELPRGVTLESLWTMSL* # ORIGINAL: g12427.t1 original gene structure, not modified by PASA NODE_989_length_15035_cov_39.6568 AUGUSTUS gene 10835 11647 . + . ID=g12427;Name=g12427.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS mRNA 10835 11647 . + . ID=g12427.t1;Parent=g12427;Name=g12427.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS exon 10835 11647 . + . ID=g12427.t1.exon1;Parent=g12427.t1 NODE_989_length_15035_cov_39.6568 AUGUSTUS CDS 10835 11647 . + 0 ID=cds.g12427.t1;Parent=g12427.t1 #PROT g12427.t1 g12427 MPASVVSLMPRLGCIMPFGGFTSTKGAILAIETHLHNALFEVTLLPHVEINDALPQQRHRDVLDYEGPLYPPDNAIEDVSAILRKCSFPARYCIGSMDSLYSHSMPFATVVIEEGIDPRAVNRVAAQQALDALREQRKHSPCRRKVAESKIRRRTEKENTPLVHNKGDPRSSKRRKEQRREDGASANQLPNASTATIYVCRAKCCSCSTEFSNHSARMMHELRIVKRFAKRGILAYTLEELIKKAEEKKRGHHDWLLTLTPLKKTPKNHC* # PASA_UPDATE: g12424.t1, single gene model update, valid-1, status:[pasa:asmbl_10238,status:12], valid-1 NODE_989_length_15035_cov_39.6568 . gene 276 1811 . - . ID=g12424;Name=g12424.t1 NODE_989_length_15035_cov_39.6568 . mRNA 276 1811 . - . ID=g12424.t1;Parent=g12424;Name=g12424.t1 NODE_989_length_15035_cov_39.6568 . five_prime_UTR 1753 1811 . - . ID=g12424.t1.utr5p1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . exon 1476 1811 . - . ID=g12424.t1.exon1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . CDS 1476 1752 . - 0 ID=cds.g12424.t1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . exon 1251 1313 . - . ID=g12424.t1.exon2;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . CDS 1251 1313 . - 2 ID=cds.g12424.t1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . exon 959 1108 . - . ID=g12424.t1.exon3;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . CDS 959 1108 . - 2 ID=cds.g12424.t1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . exon 798 819 . - . ID=g12424.t1.exon4;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . CDS 798 819 . - 2 ID=cds.g12424.t1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . exon 276 708 . - . ID=g12424.t1.exon5;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . CDS 432 708 . - 1 ID=cds.g12424.t1;Parent=g12424.t1 NODE_989_length_15035_cov_39.6568 . three_prime_UTR 276 431 . - . ID=g12424.t1.utr3p1;Parent=g12424.t1 #PROT g12424.t1 g12424 MRRLFSLTSNIGRLGSVHLFRSPLTTAKVSRFVSGSSTFADKPFRLQSTMAAPIQLYSLATPNGIKVQIALEEMGLKYDPHTINIMKGEQFTAEFKKVNPNSKIPAITDANGPDGNPINVFESGAILLYLAEKTGLFLSKDARKRIETIEWIMFQMSGVGPMFGQFNHFNKYAPEKIPYAINRYTTEAKRILGVLNSHLEGRQYLVGDEYSIADICTWPWVDTMGKNAGEVMAFDTFPNVVAWAARIAQRPAVQRGLKVCAF* # PASA_UPDATE: g8438.t1, single gene model update, valid-1, status:[pasa:asmbl_5130,status:12], valid-1 NODE_2859_length_4923_cov_40.0656 . gene 118 1333 . + . ID=g8438;Name=g8438.t1 NODE_2859_length_4923_cov_40.0656 . mRNA 118 1333 . + . ID=g8438.t1;Parent=g8438;Name=g8438.t1 NODE_2859_length_4923_cov_40.0656 . five_prime_UTR 118 119 . + . ID=g8438.t1.utr5p1;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . exon 118 254 . + . ID=g8438.t1.exon1;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . CDS 120 254 . + 0 ID=cds.g8438.t1;Parent=g8438.t1;5_prime_partial=true NODE_2859_length_4923_cov_40.0656 . exon 482 544 . + . ID=g8438.t1.exon2;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . CDS 482 544 . + 0 ID=cds.g8438.t1;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . exon 796 1333 . + . ID=g8438.t1.exon3;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . CDS 796 969 . + 0 ID=cds.g8438.t1;Parent=g8438.t1 NODE_2859_length_4923_cov_40.0656 . three_prime_UTR 970 1333 . + . ID=g8438.t1.utr3p1;Parent=g8438.t1 #PROT g8438.t1 g8438 NEEHCFKITRMRCWKLVGLNDRVEFSFHYVFSKQDMQWVSVKGKQAIFASLCVQSIVDEIMRLREKEKAAAAAASNSAAPTEAKPNLLGSAINSITQGIMNMGGGAPGRKNSVFEGGISDDDL* # ORIGINAL: g8439.t1 original gene structure, not modified by PASA NODE_2859_length_4923_cov_40.0656 AUGUSTUS gene 1707 3385 . - . ID=g8439;Name=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS mRNA 1707 3385 . - . ID=g8439.t1;Parent=g8439;Name=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 3300 3385 . - . ID=g8439.t1.exon1;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 3300 3385 . - 0 ID=cds.g8439.t1;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 2969 3116 . - . ID=g8439.t1.exon2;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 2969 3116 . - 1 ID=cds.g8439.t1;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 2675 2764 . - . ID=g8439.t1.exon3;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 2675 2764 . - 0 ID=cds.g8439.t1;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 2148 2453 . - . ID=g8439.t1.exon4;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 2148 2453 . - 0 ID=cds.g8439.t1;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 1707 1907 . - . ID=g8439.t1.exon5;Parent=g8439.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 1707 1907 . - 0 ID=cds.g8439.t1;Parent=g8439.t1 #PROT g8439.t1 g8439 MEGAVRTNAGDRHIVTPGDVITTETGFMRGHGTYMEDDKLIATVAGYVERVNRLIVVRPLKTRYNGEVGDVVVARITEVAQKRWKADTNARLDSILMLSSVNLPGGVLRRRSAEDELMMREYFKEGDLISAEVQSIYSDGSLALHTRSLKYGKLTHGLFVSVPSALIKRCKSHFHTLPCGVSVIIGTNGYVWISAKRPEAGAEGIEKEEMDVTPDVRSTVARVRNAVAALESQTILIYDTTLVYTYEASLRYDVKDMLRPDVAEEITAEARLLAQQ* # ORIGINAL: g8440.t1 original gene structure, not modified by PASA NODE_2859_length_4923_cov_40.0656 AUGUSTUS gene 3850 4890 . + . ID=g8440;Name=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS mRNA 3850 4890 . + . ID=g8440.t1;Parent=g8440;Name=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 3850 3959 . + . ID=g8440.t1.exon1;Parent=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 3850 3959 . + 0 ID=cds.g8440.t1;Parent=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 4124 4504 . + . ID=g8440.t1.exon2;Parent=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 4124 4504 . + 1 ID=cds.g8440.t1;Parent=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS exon 4794 4890 . + . ID=g8440.t1.exon3;Parent=g8440.t1 NODE_2859_length_4923_cov_40.0656 AUGUSTUS CDS 4794 4890 . + 1 ID=cds.g8440.t1;Parent=g8440.t1 #PROT g8440.t1 g8440 MAASSPLRSGANRTPLGLQTPHGSVGPSSPGAIAGIRPARSSHAHTTSPFGIDSSSRENASAVRQTPSIASVRNSPFSASTPTTFSQQQQSQQHPQQQRGTPLSGANRAPTSPTNVVAWESPRMRAVQNVELRRRNGGRALAYAAVGIFLVVLTNHQAGSDSMRDVVKMVTSLGVSPTTAQEWTGGYCMHACASH* # PASA_UPDATE: g5162.t1, single gene model update, valid-1, status:[pasa:asmbl_7552,status:12], valid-1 NODE_4701_length_1311_cov_45.4911 . gene 187 683 . + . ID=g5162;Name=g5162.t1 NODE_4701_length_1311_cov_45.4911 . mRNA 187 683 . + . ID=g5162.t1;Parent=g5162;Name=g5162.t1 NODE_4701_length_1311_cov_45.4911 . exon 187 273 . + . ID=g5162.t1.exon1;Parent=g5162.t1 NODE_4701_length_1311_cov_45.4911 . CDS 187 273 . + 0 ID=cds.g5162.t1;Parent=g5162.t1;5_prime_partial=true NODE_4701_length_1311_cov_45.4911 . exon 419 683 . + . ID=g5162.t1.exon2;Parent=g5162.t1 NODE_4701_length_1311_cov_45.4911 . CDS 419 535 . + 0 ID=cds.g5162.t1;Parent=g5162.t1 NODE_4701_length_1311_cov_45.4911 . three_prime_UTR 536 683 . + . ID=g5162.t1.utr3p1;Parent=g5162.t1 #PROT g5162.t1 g5162 VTGEPLIQRSDDNADTLTKRLDAFHKQTKPLAEYYSKKGVLSRIDASLPESIVWKNILSCFNSAKKQ* # ORIGINAL: g1564.t1 original gene structure, not modified by PASA NODE_648_length_19617_cov_38.3194 AUGUSTUS gene 350 1954 . - . ID=g1564;Name=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS mRNA 350 1954 . - . ID=g1564.t1;Parent=g1564;Name=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS exon 1093 1954 . - . ID=g1564.t1.exon1;Parent=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS CDS 1093 1954 . - 0 ID=cds.g1564.t1;Parent=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS exon 708 741 . - . ID=g1564.t1.exon2;Parent=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS CDS 708 741 . - 2 ID=cds.g1564.t1;Parent=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS exon 350 419 . - . ID=g1564.t1.exon3;Parent=g1564.t1 NODE_648_length_19617_cov_38.3194 AUGUSTUS CDS 350 419 . - 1 ID=cds.g1564.t1;Parent=g1564.t1 #PROT g1564.t1 g1564 MTDGSESSADDAESSQSHTPPTDAVPTENIPAEHVPLESGRRMSVDADCNGVGPRRKGGNAYMDAGRVRSRQSVESLDSSAHRKNSNAFVDAEEVTRRHSVHHDDSAHLRSASLPSAAAAAAVGSPHSWYDGAVDGSGVYGRNSRSSLHDADSTQRASPYALDADAEAIPQRRHSVGSYANAGVAAESDPPVRRNSIRRVHSKGGESVSNHDGGIASTSANALSGTVDRGAAGYVNNASGGLVLQSSSCRNQNTRLEEQGDDEEYDSFPVNPEDECGESGEEGEEDGEYDEYEYADNGSDSDGQEEFEGVDAFEGEFEKDPR # PASA_UPDATE: g1565.t1, single gene model update, valid-1, status:[pasa:asmbl_8676,status:12],[pasa:asmbl_8677,status:12],[pasa:asmbl_8678,status:12],[pasa:asmbl_8679,status:12],[pasa:asmbl_8680,status:12], valid-1 NODE_648_length_19617_cov_38.3194 . gene 5452 19435 . - . ID=g1565;Name=g1565.t1 NODE_648_length_19617_cov_38.3194 . mRNA 5452 19435 . - . ID=g1565.t1;Parent=g1565;Name=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 18119 19435 . - . ID=g1565.t1.exon1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 18119 19435 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 17749 17853 . - . ID=g1565.t1.exon2;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 17749 17853 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 17223 17486 . - . ID=g1565.t1.exon3;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 17223 17486 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 16788 16934 . - . ID=g1565.t1.exon4;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 16788 16934 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 16046 16465 . - . ID=g1565.t1.exon5;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 16046 16465 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 15691 15834 . - . ID=g1565.t1.exon6;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 15691 15834 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 14804 15313 . - . ID=g1565.t1.exon7;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 14804 15313 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 14413 14574 . - . ID=g1565.t1.exon8;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 14413 14574 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 13964 14232 . - . ID=g1565.t1.exon9;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 13964 14232 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 13655 13784 . - . ID=g1565.t1.exon10;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 13655 13784 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 13316 13444 . - . ID=g1565.t1.exon11;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 13316 13444 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 12896 13078 . - . ID=g1565.t1.exon12;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 12896 13078 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 12555 12722 . - . ID=g1565.t1.exon13;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 12555 12722 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 12168 12266 . - . ID=g1565.t1.exon14;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 12168 12266 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 11661 11887 . - . ID=g1565.t1.exon15;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 11661 11887 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 11302 11404 . - . ID=g1565.t1.exon16;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 11302 11404 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 10820 10991 . - . ID=g1565.t1.exon17;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 10820 10991 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 10505 10704 . - . ID=g1565.t1.exon18;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 10505 10704 . - 2 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 10119 10382 . - . ID=g1565.t1.exon19;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 10119 10382 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 9632 9799 . - . ID=g1565.t1.exon20;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 9632 9799 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 9145 9314 . - . ID=g1565.t1.exon21;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 9145 9314 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 8785 8905 . - . ID=g1565.t1.exon22;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 8785 8905 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 8141 8359 . - . ID=g1565.t1.exon23;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 8141 8359 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 7650 7750 . - . ID=g1565.t1.exon24;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 7650 7750 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 7278 7367 . - . ID=g1565.t1.exon25;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 7278 7367 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 6910 7037 . - . ID=g1565.t1.exon26;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 6910 7037 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 6530 6651 . - . ID=g1565.t1.exon27;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 6530 6651 . - 2 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 6161 6339 . - . ID=g1565.t1.exon28;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 6161 6339 . - 0 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . exon 5452 5978 . - . ID=g1565.t1.exon29;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . CDS 5888 5978 . - 1 ID=cds.g1565.t1;Parent=g1565.t1 NODE_648_length_19617_cov_38.3194 . three_prime_UTR 5452 5887 . - . ID=g1565.t1.utr3p1;Parent=g1565.t1 #PROT g1565.t1 g1565 MHTGTLYCDILGSCISGNTPCRLPVFCGGGTRYCNLTDSCIGFDTPCRPVVNCSVGTSHCPEKGYGTCLPSTEPCIQNVGVFPRTAQLSVNATKGGSISVSLADAGLRAAIAERNAVITASGLPGLELSAVGALVVGVDYFPRRQRLRDDAPSVVVTVSGDLSPVTFNGSFPVVIKSDGRFRIIPYSQFYGQIVISVRGWDGTRLATGIARTEALFNASAQVALDPYITRIVFNVQNVPSAPILETKSVFKVADTDEMSPEILIPTFRATDVLGGIGAVDLDFQLSIESSSMWTLLSAVIQKLQLSLDNPRDRQRLVDTPPSIIASIVAAFGPVAETDDITAYRNVISLFGTGLAVTVSSQIMQYRYNDTWIDLVGSASTTNAYMLPAWTILRMAPTLSSGSYAATVRVVKGKFLEQPGTRALTPFSVNSNNISAASSSITFNVVSVNSRPSFTAPAADLTPYLPYEVNLTTRSLPDFSVAGSVSAIAMDNQQDKLGIAVVGFIPFVQASALFGVWQFHNGSGAWLNIPEASERNLFLLPTDARVRFIPGQFNFMNASLVVRAWDETDYSERAYTSVSVGIIGTASSTFSQTTALLTARRFGCDKQVDSGLRFDACKICGGNGTSCVGCDNIAGSNRRVDQCGVCGGEDKCLGCDKVPFSRAVVDDCGVCNGNNTAKDCAGTCFGTAARDDCGVCSGGRTGRVPNARKDCNNVCFGPAKVDNCGDCAVPNNTAEWNKRLDCAGVCDGDSKRDRCGLCVVPGIVPRWIDCNGDCFGRAQVDTCGTCFGGNSTVKLPNSRMDPCGVCNGDGKTCAGCDGVPNSRLKYDVCNVCGGNNTACVAVSRVDPPALDANSDAAAIRVYGAFEAAANSTEGIKLVCRIVRTDAAAGSNAAQVTVAGIIVRSPVGTAVQCTFSPAKLTAGKYAVSLSLNGGVAFTQSAADLVLFDRSVVSITRVVPSEAPFNVDGVISIYGNGFVNNGENTQCIFVDVDSGDRYSNAASFANSSVVTCKYTASDVSRRFVMTVTFDGDDQNIAVPTSRAPTFTLFAASVDVSSVQFTDVLTSLIVTFAGDVAFDPRAGTGCRPYFNALSLQALGDAACMWRSPQQMIVTLRKTSLKPSDVIVLDGNALRPLNQPYGRATNATVRISPPANVPVPTVSLRAAGEVGSCDNLDIYFQVGGTGGRDVTLTWTVTADDGSDTSSIVSVLRAPAVTQKGSASINGTLLKSATPYKIFLVATNFLGASSDVAQISTRKSARPIPKVSIVGGTDRKVSRSKFNFFTVAAEISSCGSGAGVTYLWESDQGLDLGGTKTSSQLTVSPFTFPQDQVTTLTVTVTMADDSTIFASASQKIVIDSTPLRVRIGGGSLQSFGRNRNFTLSSECADEDSSPTDIGTCSFYWTCVDDQGAPCASIEDKKSIFSNSADTRLLDPTLRAMSVPGKYFASNRTYTFTVDASKGSRKARASISVYIIPGLPPLILLDEVATKFTSDIRVRLSSTVIGNTGFARPTTSWSVVAESGFASFDLTNTTMICNTGSRTDLNNLCIEAGALVAGSKYKFRLTATNEEGSSFQDAIVNVNGGPTGGEILVDAAVTAGTEVSVTANKFVDEDGPISYTFGTRQSNGRFNLLRERREQNDARLRLPPGTADSGYNVTVVVIATDALGASSELSATVKVTPPAQLQSSTGDEAATFIAATFLDGSASRELALGDYTAFLGSLDVAMDLINKRLEGTTCVATLVALLTRVVNLLDTAWPKLQLTDDVIKRLTSILNKAVSASQCLPADVFQRVQSYLNQVIQAALSGKFSDSGASKGMDTDTALWALEAAKKTSAGATGPTGGDSNGGSGSPAANATATATSAKALTDIVQGVGAAISAGQVPGEEPKVLVTDDGKLKVTVDVQQYSARDNRSLSFSGGCGAACDVNVPAATLAGLVNITGCDADKGCQANFGSIYAQFSSNPYGQSNDTSASVAEISLINSATRTPYVVKNAPSPINITIACPNCATLREVKCTYYNVTSGKWVTDGLVLVARTATSITCQTNHFTSFSGQNVQGSTPGTGDSASSSSNTNVVAIAVPVAIGGVAVIAAIGFIVYKKRSPSSGKASSAPYGSKPYKADDAYVEESQMHTMASNPLRTDHA* # PASA_UPDATE: g8743.t1, single gene model update, valid-1, status:[pasa:asmbl_4578,status:3], valid-1 NODE_2576_length_5812_cov_40.2048 . gene 4463 5660 . - . ID=g8743;Name=g8743.t1 NODE_2576_length_5812_cov_40.2048 . mRNA 4463 5660 . - . ID=g8743.t1;Parent=g8743;Name=g8743.t1 NODE_2576_length_5812_cov_40.2048 . five_prime_UTR 5610 5660 . - . ID=g8743.t1.utr5p1;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . exon 5285 5660 . - . ID=g8743.t1.exon1;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . CDS 5285 5609 . - 0 ID=cds.g8743.t1;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . exon 5005 5092 . - . ID=g8743.t1.exon2;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . CDS 5005 5092 . - 2 ID=cds.g8743.t1;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . exon 4463 4827 . - . ID=g8743.t1.exon3;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . CDS 4674 4827 . - 1 ID=cds.g8743.t1;Parent=g8743.t1 NODE_2576_length_5812_cov_40.2048 . three_prime_UTR 4463 4673 . - . ID=g8743.t1.utr3p1;Parent=g8743.t1 #PROT g8743.t1 g8743 MASSSYLAAVCVLIALVCSASAAPLISHGLGPVILRDEQVTPKNVGDLFVGILAGLVEDVGNITSCVGDGEQTFNDFESALSSLKQGIDEKDTKAILAAFQDIGNGVNDFKAALQACGVEKLASELTTVITELKTPSNWIKIIVSDVVTIFKNFKEITTDCKQASDDWKSENYEGAGEAIGRIVGLFL* # PASA_UPDATE: g8742.t1, single gene model update, valid-1, status:[pasa:asmbl_4577,status:12], valid-1 NODE_2576_length_5812_cov_40.2048 . gene 235 3742 . + . ID=g8742;Name=g8742.t1 NODE_2576_length_5812_cov_40.2048 . mRNA 235 3742 . + . ID=g8742.t1;Parent=g8742;Name=g8742.t1 NODE_2576_length_5812_cov_40.2048 . five_prime_UTR 235 235 . + . ID=g8742.t1.utr5p1;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . exon 235 349 . + . ID=g8742.t1.exon1;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . CDS 236 349 . + 0 ID=cds.g8742.t1;Parent=g8742.t1;5_prime_partial=true NODE_2576_length_5812_cov_40.2048 . exon 531 592 . + . ID=g8742.t1.exon2;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . CDS 531 592 . + 0 ID=cds.g8742.t1;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . exon 987 2441 . + . ID=g8742.t1.exon3;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . CDS 987 2441 . + 1 ID=cds.g8742.t1;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . exon 2615 3742 . + . ID=g8742.t1.exon4;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . CDS 2615 3365 . + 1 ID=cds.g8742.t1;Parent=g8742.t1 NODE_2576_length_5812_cov_40.2048 . three_prime_UTR 3366 3742 . + . ID=g8742.t1.utr3p1;Parent=g8742.t1 #PROT g8742.t1 g8742 WDIRAGKTIALLEGHTKAVNAADASADASTVVSVSDKELILWAFQRDKALQTTSSSSRRGSIFRKPISSAKRKIIPMKALTTASDCRISPTGDCVAVAVDYGIVLVDFDSGTTLGYLLGHTGSITSIAFGPTGRLLASAAEDTTVRVWDLGTCAWLPSAASLPLTKDISLQSPSHPNDLVRQASQGVLMGSNPTASPQGRLQRRGSLHLSSFHLVTLDGTADSVGPMRTGSTMSLSNSMAQTASISGAAGVAIGSSPGSPPLGGRDSSLGKYTNAGVEGVANPAVVRCEMATGTAIAVTMDGRVIIIDVNSGLTRHEIRTSEKVRLATISDDGRLVAGVVGDDINVWDALDGKVLRVAASGSKGIVSCVALTRCSTGVVFATGSEVHLVVITDSHSKPRKVFGTSGGALVSCVCISRDNRFVVAGDGDGNVSLVDLATAAVVSQARTSGVVQRVDISPCGTLFIAAYGKHVTLHEARSGALVTSFERESFALQPVMFSPCGRYFAYVDGECVTVREANSSGLMLLRTASSKGLVEHASFSLCSRYIATVSTGGTVTVWSTATGEEECVFVSALQSTRLQNILCSVVCSADGQCVVLGSSTGHTVLRLKRRNAPDAAAIPLEAKMVRGMSKSRLSLSMPSNAFQDPQSEGASATSSRIAANNALMPPLTVVARHMFSVNTLRADACIARCPRCAYSNVIDDDVAAKLRAYEPVDSSALRVRCGRCVGQLVLLPRVASGEVVGLDFMGAPGVLPPKTASSSRKSAPTSTSASPFVTPAAAMEKKAGNRSSACAIL* # ORIGINAL: g4639.t1 original gene structure, not modified by PASA NODE_3531_length_3261_cov_40.4419 AUGUSTUS gene 337 2073 . + . ID=g4639;Name=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS mRNA 337 2073 . + . ID=g4639.t1;Parent=g4639;Name=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS exon 337 469 . + . ID=g4639.t1.exon1;Parent=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS CDS 337 469 . + 0 ID=cds.g4639.t1;Parent=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS exon 794 1500 . + . ID=g4639.t1.exon2;Parent=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS CDS 794 1500 . + 2 ID=cds.g4639.t1;Parent=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS exon 1849 2073 . + . ID=g4639.t1.exon3;Parent=g4639.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS CDS 1849 2073 . + 0 ID=cds.g4639.t1;Parent=g4639.t1 #PROT g4639.t1 g4639 AAKWFVLQKGLQRKKQMSSVDYDDDYSPALAKNGRAGRTSDRDEGAPPAQSKSRGGITMIVAYILALIPAIAFCHSVWDTEDPLVAALIGDVMATFIIFGFSVALDNSSLYDPYWSVAPVPIVIFFAMHPAGTAIVSLGGASVYVRLAVVALLVLTWAFRLTYNFYIRWEGLSHEDWRYVDLRRQTGPAYWVVSLLGIHMFPTLLVYGGCVSLYVVFCAGGAPLNEIDIAAAAVTAAAIFIEATADAQLRRFVAKGKAKPGDVLCTGLWQYSRHPNYFGEVLFWWGLFLFSLAAGIPSHLAACTWAGPIAITCLFVFISVPLVEKRMIERRPAFAAYVSRTSALFPWFPRRASN* # ORIGINAL: g4640.t1 original gene structure, not modified by PASA NODE_3531_length_3261_cov_40.4419 AUGUSTUS gene 2793 3056 . - . ID=g4640;Name=g4640.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS mRNA 2793 3056 . - . ID=g4640.t1;Parent=g4640;Name=g4640.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS exon 2793 3056 . - . ID=g4640.t1.exon1;Parent=g4640.t1 NODE_3531_length_3261_cov_40.4419 AUGUSTUS CDS 2793 3056 . - 0 ID=cds.g4640.t1;Parent=g4640.t1 #PROT g4640.t1 g4640 MHTWSLRGAGVYLKDLTFIEDGNEDYLREGLINIGKRRLVYGVLKEIEHFQDQTYNLLVVPGIRDFLLSLKIETDDRLHELSKEVEP* # ORIGINAL: g11451.t1 original gene structure, not modified by PASA NODE_3269_length_3871_cov_37.2937 AUGUSTUS gene 194 3780 . - . ID=g11451;Name=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS mRNA 194 3780 . - . ID=g11451.t1;Parent=g11451;Name=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 3394 3780 . - . ID=g11451.t1.exon1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 3394 3780 . - 0 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 2981 3166 . - . ID=g11451.t1.exon2;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 2981 3166 . - 0 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 2619 2783 . - . ID=g11451.t1.exon3;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 2619 2783 . - 0 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 2283 2385 . - . ID=g11451.t1.exon4;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 2283 2385 . - 0 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 2009 2105 . - . ID=g11451.t1.exon5;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 2009 2105 . - 2 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 970 1068 . - . ID=g11451.t1.exon6;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 970 1068 . - 1 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 637 696 . - . ID=g11451.t1.exon7;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 637 696 . - 1 ID=cds.g11451.t1;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS exon 194 284 . - . ID=g11451.t1.exon8;Parent=g11451.t1 NODE_3269_length_3871_cov_37.2937 AUGUSTUS CDS 194 284 . - 1 ID=cds.g11451.t1;Parent=g11451.t1 #PROT g11451.t1 g11451 MYRDLDIRIRESQEEIQRLTLQLAAAATAARRRGSQMGLGVAQLSMSRNTLLNELRADGSSSDEPSTSKQNMPSSPGAEVDAPATSSSGGMKSPSFRAGAFSDGKMDVVIAGAVEALNARVVAMETQLRNFKDQPLAPSAPGVAAGGNTDLLQHDVVRLQSDVFSIRAWMEQKDAASDGVPEKAILKRLLSEHSNDGKEKQLIARMDALSADMEQIKGDRMGNAASQLIGKQQAALQEMSQKLAALDTSMRRAQAKTSFELKQRITKADLEALSKQNGFSAVDGRAPPNMPRRMAGAPAVCQCDPADPAVLRSAALYSEPPMAMPSIRSAGGAYTNGQIEGPISVKECDVHDRATTGYMQEDLIKTSEVGVVGTNGKVYKGRKRLVTGGALPPIDT # PASA_UPDATE: g6402.t1, single gene model update, valid-1, status:[pasa:asmbl_5637,status:12], valid-1 NODE_3151_length_4177_cov_37.2886 . gene 1464 4026 . + . ID=g6402;Name=g6402.t1 NODE_3151_length_4177_cov_37.2886 . mRNA 1464 4026 . + . ID=g6402.t1;Parent=g6402;Name=g6402.t1 NODE_3151_length_4177_cov_37.2886 . exon 1464 2084 . + . ID=g6402.t1.exon1;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . CDS 1464 2084 . + 0 ID=cds.g6402.t1;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . exon 2309 2445 . + . ID=g6402.t1.exon2;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . CDS 2309 2445 . + 0 ID=cds.g6402.t1;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . exon 2709 2916 . + . ID=g6402.t1.exon3;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . CDS 2709 2916 . + 1 ID=cds.g6402.t1;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . exon 3176 3339 . + . ID=g6402.t1.exon4;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . CDS 3176 3339 . + 0 ID=cds.g6402.t1;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . exon 3828 4026 . + . ID=g6402.t1.exon5;Parent=g6402.t1 NODE_3151_length_4177_cov_37.2886 . CDS 3828 4026 . + 1 ID=cds.g6402.t1;Parent=g6402.t1;3_prime_partial=true #PROT g6402.t1 g6402 MPPVDAPAAAPVAPAAVVVKTETASQPVPSKPRDESEDDDVPLGARPKKEPAAARKKAAAAEEDDDDDVPLAARKAASTAPASKKLSMKLKKEQSDTNGAKASDGKKSTTAPAPTSSTSTSADATATGKKRKAVQSDSDDDDKPLAHRKPPAKKAKEEPSSAATTPVKKAANNKRKAKEESDESDEDAPLKKRKTAAAAKKKAGAKKADAEDTKPAKKGGKKKKEGDGEEGEEMDEAQYKWWEQQMLADSDVKWQTLQHAGPLLAPPYIRLPASVRLKLDGKAVQLSERAEEVAGFYAAMLKTDYMSKPQFKQNFFHDWKKQMTVEEQKTFNDFSVLDRCDFSDIYAHYERLREEKKAMSKEEKLKIKKQNEEIVKRYGVCMMDGIKERIGNFRIEPPGLFRGRGEHPKMGRLKKRITPEDITINIGKEAKVPEPPAGHRWKE # ORIGINAL: g3084.t1 original gene structure, not modified by PASA NODE_5653_length_767_cov_25.2558_potentialcontaminant AUGUSTUS gene 2 767 . + . ID=g3084;Name=g3084.t1 NODE_5653_length_767_cov_25.2558_potentialcontaminant AUGUSTUS mRNA 2 767 . + . ID=g3084.t1;Parent=g3084;Name=g3084.t1 NODE_5653_length_767_cov_25.2558_potentialcontaminant AUGUSTUS exon 2 767 . + . ID=g3084.t1.exon1;Parent=g3084.t1 NODE_5653_length_767_cov_25.2558_potentialcontaminant AUGUSTUS CDS 2 767 . + 1 ID=cds.g3084.t1;Parent=g3084.t1 #PROT g3084.t1 g3084 VKLAHKRHPATYADKRQRQQVVVEVPKDASCNTRTNDSDSNSDDESNSKSDKGSDTADESVNSDESTNGESDDSECDDSESEDNEKEKEQEDPDEDSNGEDDDNDGNAIRLGDTHFVQIADTRKQPGLAKYHKSVDGFPVGVIEAIHKGAGGRITAVDLWWYYRFGDLPPTIRNAVPGIIGKNELFESDDIEKNIPVESLCGNAGVATSLKEYLRGDRQQLLCRFKYDIDTKEMSLKRLNIPKGAKITDKTAHPD # ORIGINAL: g138.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 20102 22718 . - . ID=g138;Name=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 20102 22718 . - . ID=g138.t1;Parent=g138;Name=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 22437 22718 . - . ID=g138.t1.exon1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 22437 22718 . - 0 ID=cds.g138.t1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 21816 22277 . - . ID=g138.t1.exon2;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 21816 22277 . - 0 ID=cds.g138.t1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 21415 21529 . - . ID=g138.t1.exon3;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 21415 21529 . - 0 ID=cds.g138.t1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 20758 20878 . - . ID=g138.t1.exon4;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 20758 20878 . - 2 ID=cds.g138.t1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 20396 20522 . - . ID=g138.t1.exon5;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 20396 20522 . - 1 ID=cds.g138.t1;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 20102 20191 . - . ID=g138.t1.exon6;Parent=g138.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 20102 20191 . - 0 ID=cds.g138.t1;Parent=g138.t1 #PROT g138.t1 g138 MRELLIACVGKPSAGKSTFLNAVTDANAKTGNYPFTTIEPNHGVAFYTTECPCKRFGKSDKCKPRYGKCVDGRRSVPVKVMDVAGLVPGAHEGKGLGNQFLDDLRHADVLLHVVDASGTTNEKGEATSGYDPISDVEWLRSEIHLWIFYNLQKKWTNIVRRHVATRSDPVATLQAQLSGYGTTEAVVARFYTRISGDLPPLHEWQAEHIHTAVDAFLEERFPTVIVLNKIDNGDADKNIQRILKKYGGDMIVLSSALAECFLKKLHKDRFIDYEEGADSFKTADEAHLVLFRYDGTGCADAIKRAVEARGYLPAYPVKNINNFGGDGTQHVFRDCLLIPPGMTVREFAKLVHPELEKYYLYAEGVGGIRLGESDIVTDKNNIISFRTSQALNPSKTDK* # ORIGINAL: g141.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 27418 28710 . + . ID=g141;Name=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 27418 28710 . + . ID=g141.t1;Parent=g141;Name=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 27418 27424 . + . ID=g141.t1.exon1;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 27418 27424 . + 0 ID=cds.g141.t1;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 27761 27912 . + . ID=g141.t1.exon2;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 27761 27912 . + 2 ID=cds.g141.t1;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 28077 28134 . + . ID=g141.t1.exon3;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 28077 28134 . + 0 ID=cds.g141.t1;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 28290 28361 . + . ID=g141.t1.exon4;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 28290 28361 . + 2 ID=cds.g141.t1;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 28481 28710 . + . ID=g141.t1.exon5;Parent=g141.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 28481 28710 . + 2 ID=cds.g141.t1;Parent=g141.t1 #PROT g141.t1 g141 MQVAIITAGSGRPTTPKGVSNKARIVRTSAASPIPIKSEDSMHGAAPVELVSEFLGAIMAKDYEAAQTLCLEVLKYEPHNRMVLQYKAVLGDRIKLDAEMADAESDEESDDSDDDDSSDNSEDGSDDDDSEGDDSSADDSAPSEDDTPKKRETVTPSVASVTKAVKSVRIRE* # ORIGINAL: g136.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 7565 13663 . - . ID=g136;Name=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 7565 13663 . - . ID=g136.t1;Parent=g136;Name=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 13620 13663 . - . ID=g136.t1.exon1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 13620 13663 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 13289 13438 . - . ID=g136.t1.exon2;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 13289 13438 . - 1 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 12923 13015 . - . ID=g136.t1.exon3;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 12923 13015 . - 1 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 12670 12742 . - . ID=g136.t1.exon4;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 12670 12742 . - 1 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 12441 12474 . - . ID=g136.t1.exon5;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 12441 12474 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 12221 12279 . - . ID=g136.t1.exon6;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 12221 12279 . - 2 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 11916 12068 . - . ID=g136.t1.exon7;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 11916 12068 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 11657 11779 . - . ID=g136.t1.exon8;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 11657 11779 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 11393 11515 . - . ID=g136.t1.exon9;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 11393 11515 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 11163 11204 . - . ID=g136.t1.exon10;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 11163 11204 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 9930 10916 . - . ID=g136.t1.exon11;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 9930 10916 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 9449 9565 . - . ID=g136.t1.exon12;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 9449 9565 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 9154 9318 . - . ID=g136.t1.exon13;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 9154 9318 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 8463 8849 . - . ID=g136.t1.exon14;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 8463 8849 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 8141 8338 . - . ID=g136.t1.exon15;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 8141 8338 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 7866 8024 . - . ID=g136.t1.exon16;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 7866 8024 . - 0 ID=cds.g136.t1;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 7565 7657 . - . ID=g136.t1.exon17;Parent=g136.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 7565 7657 . - 0 ID=cds.g136.t1;Parent=g136.t1 #PROT g136.t1 g136 MSDGADTAVSLPHISAAGSSVGRSPSPGHSPSPSHLLTTGSHGRERGAGTVSAVDASSFYLTGDLGHARQDIRLTSSAEDVAVLTDPLGEKRQYNSLYDRHLKSYFSKPHVQKHLGKVGMANGSHVIGTRREFREALRVQKFMADREVLKKKMQEKELQRIRAMLEKSRAELMKTQERMDEERKRRELERRIEKATSNAAKERTSDALKKSLEKSAADEQDRLRRSAERIRTEHHLDPVHRKDDPKIASESVHDATTAISVVEASRVASEAEERHRRDLEELEREARRLRKKEEEAIKEMLRVQEELRTQEEEERRQVEKERARLEELQLQHAETERRRLEAEQKRQEEEERRLKLLELQRIEILRRRQEQEERARVAAEETRKAEEEALRRSLEEKLRLERERKLRAELEFEQLENRRRRIESEVDTLNAEFRELDAHALERQALAENWSAEERERHEAERRAIEKEEEQRRVQMQRDMEAEQRRLREMEEEQRRRQQSGEEALRAAEEQRQRLEAEQRAADEERIRKKEETERLLRAEEERLRLEAEGMAGEVERLRRQAEDVRRAQEEEERLLRESLAAAKQMLAEKQQLQQQQQQQQLLLQQQQQQQQQQQQSQSLSKSQGQQVPPRSAPTQRDPFESLVLHVLTRADIDCNGGLARKDLEAVLRGRALNFRLTDDEISALWGMADSPEHVLMPTREAAAMMRSLLMKVFAKYPDERREWCKFTSESDGVEYYFSKRTGVLQRDLPAGYRPDTPCHQQPPDSVFEKVLLDMFRHGDKGNDGVLDEAEFWHIFESRALSLNMTYEDIVQLKADFGLAKDGRVTYTEFVPIAKKLLLTFYAKKDLNGQSEWCELYCKDFGLLYFNKLTGQSQYERPPEFRAPPRDDAFEENFYSIFSNADADKDGFLNLEELWELFQSPTLSLYLGTDEVGEVMAKFDRDGDGRLTYAEFLPLAKKLVALVYGAQSEGDWCKVEFQQGRHLYFNKKTGETSFEAPSS* # ORIGINAL: g143.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 29660 30103 . - . ID=g143;Name=g143.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 29660 30103 . - . ID=g143.t1;Parent=g143;Name=g143.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 30000 30103 . - . ID=g143.t1.exon1;Parent=g143.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 30000 30103 . - 0 ID=cds.g143.t1;Parent=g143.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 29660 29849 . - . ID=g143.t1.exon2;Parent=g143.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 29660 29849 . - 1 ID=cds.g143.t1;Parent=g143.t1 #PROT g143.t1 g143 MDLLVLQDIVTYLRRNSANVKRMCGCILQGAVSDRDYMSTVDGGKEAAELAARMVCDGKGDEPMPLSAWDTPITANRYASLSGMSSHMSVSRKAHVC* # PASA_UPDATE: g139.t1, single gene model update, valid-1, status:[pasa:asmbl_3969,status:3], valid-1 NODE_229_length_30388_cov_60.7453 . gene 22869 25507 . - . ID=g139;Name=g139.t1 NODE_229_length_30388_cov_60.7453 . mRNA 22869 25507 . - . ID=g139.t1;Parent=g139;Name=g139.t1 NODE_229_length_30388_cov_60.7453 . five_prime_UTR 25420 25507 . - . ID=g139.t1.utr5p1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 25352 25507 . - . ID=g139.t1.exon1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 25352 25419 . - 0 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 25032 25210 . - . ID=g139.t1.exon2;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 25032 25210 . - 1 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 24731 24811 . - . ID=g139.t1.exon3;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 24731 24811 . - 2 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 24336 24508 . - . ID=g139.t1.exon4;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 24336 24508 . - 2 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 23968 24100 . - . ID=g139.t1.exon5;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 23968 24100 . - 0 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 23489 23660 . - . ID=g139.t1.exon6;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 23489 23660 . - 2 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . exon 22869 23251 . - . ID=g139.t1.exon7;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . CDS 23104 23251 . - 1 ID=cds.g139.t1;Parent=g139.t1 NODE_229_length_30388_cov_60.7453 . three_prime_UTR 22869 23103 . - . ID=g139.t1.utr3p1;Parent=g139.t1 #PROT g139.t1 g139 MGKDYYRTLGLNRGATEDDVKKAYRKLALKYHPEKNKAAEAEQLFDEIAEAYDVLSDAEHRAIFDQYGEEGLKNGVPIGPNGEFTGAYTFHGNAHQIFKEFFGGNNPFADFFPADKGFGFGFGGTSDHNGLGGRNRAQQDAPIEKDLFLTLEELFHGCTKKMKISRRVMNDDGHSTSVKDKVLTINVKRGWKPNTRVTFPKEGDQGPNNVPADIVFIVKEKPHARFRREGNDLVYHCNVPLLKALTGTVVEVQTLDDRLLSIPINEVISPGFTRKVLGEGMPLSKNPSERGDLTIEFAVAFPKTLTEQQKSIVRQAL* # PASA_UPDATE: g134.t1, single gene model update, valid-1, status:[pasa:asmbl_3968,status:12], valid-1 NODE_229_length_30388_cov_60.7453 . gene 2181 4322 . - . ID=g134;Name=g134.t1 NODE_229_length_30388_cov_60.7453 . mRNA 2181 4322 . - . ID=g134.t1;Parent=g134;Name=g134.t1 NODE_229_length_30388_cov_60.7453 . five_prime_UTR 4282 4322 . - . ID=g134.t1.utr5p1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 4163 4322 . - . ID=g134.t1.exon1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 4163 4281 . - 0 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 3875 3957 . - . ID=g134.t1.exon2;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 3875 3957 . - 1 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 3684 3777 . - . ID=g134.t1.exon3;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 3684 3777 . - 2 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 3422 3479 . - . ID=g134.t1.exon4;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 3422 3479 . - 1 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 3215 3287 . - . ID=g134.t1.exon5;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 3215 3287 . - 0 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 2861 2958 . - . ID=g134.t1.exon6;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 2861 2958 . - 2 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 2590 2714 . - . ID=g134.t1.exon7;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 2590 2714 . - 0 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . exon 2181 2309 . - . ID=g134.t1.exon8;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . CDS 2210 2309 . - 1 ID=cds.g134.t1;Parent=g134.t1 NODE_229_length_30388_cov_60.7453 . three_prime_UTR 2181 2209 . - . ID=g134.t1.utr3p1;Parent=g134.t1 #PROT g134.t1 g134 MLRTTLRIALQSSHSFVTFTERKLPSHVLGFRPFTTKLDSTSSPTLSEGEESPAKPKIRIYTRTGDGGTTALFTGERRSKDDEVFEALGTTDELSSALGLASAHCEESGNGLSARFEEIQCILQDVGSALATPVSSASGTKLARVAFDGTAAARVEGWIDDLDKDLPPLRAFILPSGGKSSAAIHVARTVCRRAERRIVPLVRDGHVDPSVGRFVNRLSDYLFTAARYAAMKDGKAEAIYRRQHPPQSN* # PASA_UPDATE: g135.t1, single gene model update, valid-1, status:[pasa:asmbl_3970,status:3], valid-1 NODE_229_length_30388_cov_60.7453 . gene 4692 7366 . + . ID=g135;Name=g135.t1 NODE_229_length_30388_cov_60.7453 . mRNA 4692 7366 . + . ID=g135.t1;Parent=g135;Name=g135.t1 NODE_229_length_30388_cov_60.7453 . five_prime_UTR 4692 4823 . + . ID=g135.t1.utr5p1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . exon 4692 5711 . + . ID=g135.t1.exon1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . CDS 4824 5711 . + 0 ID=cds.g135.t1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . exon 5916 5983 . + . ID=g135.t1.exon2;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . CDS 5916 5983 . + 0 ID=cds.g135.t1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . exon 6325 6520 . + . ID=g135.t1.exon3;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . CDS 6325 6520 . + 1 ID=cds.g135.t1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . exon 6709 6810 . + . ID=g135.t1.exon4;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . CDS 6709 6810 . + 0 ID=cds.g135.t1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . exon 6984 7366 . + . ID=g135.t1.exon5;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . CDS 6984 7193 . + 0 ID=cds.g135.t1;Parent=g135.t1 NODE_229_length_30388_cov_60.7453 . three_prime_UTR 7194 7366 . + . ID=g135.t1.utr3p1;Parent=g135.t1 #PROT g135.t1 g135 MDINEFRKAGHDMVEFIANYLETVDSRPVLSQVQPGYLKDLIPDHAPEEGEAWEAITADIERVIMPGVTHWQSTHFHAYFPANMTFPALLGDMLSGAIGCIGFSWICSPACTELETIVLDWLGRAIGLPESFLSRSTDGTSGKGGGVIQGTASEAVLVTMLAARTHAADAIVAKDPTQDVRGCVGRLVAYASDQVHSSVEKACLIAGVRFHAIEADADLRMTGELLEAAMREDVAKGLVPFFVCATLGSTNSCAVDDIPSVGAVCRAHELWFHVDAAYSGSALVCPEYRHTAVGVELADSFNFNPHKGLLVNFDCSTLWIKDRYALVQGFTVNPEYLKNAASESGLVTDYRHWQIPLGRRFRSLKLWFVMRTYGIKGMQSHIREHVRLASVFETLIRKDDRFELPTPPTLGLVCFRVKGSNDLNRRLLDSINGSAKLYMVHTVLKGSFIIRFVVGSIRTTDDDVVYAWNLITEHATRLLAESNSTPQ* # PASA_UPDATE: g137.t1, single gene model update, valid-1, status:[pasa:asmbl_3971,status:3], valid-1 NODE_229_length_30388_cov_60.7453 . gene 14207 19927 . + . ID=g137;Name=g137.t1 NODE_229_length_30388_cov_60.7453 . mRNA 14207 19927 . + . ID=g137.t1;Parent=g137;Name=g137.t1 NODE_229_length_30388_cov_60.7453 . five_prime_UTR 14207 14583 . + . ID=g137.t1.utr5p1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 14207 14673 . + . ID=g137.t1.exon1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 14584 14673 . + 0 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 14897 15103 . + . ID=g137.t1.exon2;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 14897 15103 . + 0 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 15266 16790 . + . ID=g137.t1.exon3;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 15266 16790 . + 0 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 17003 17134 . + . ID=g137.t1.exon4;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 17003 17134 . + 2 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 17291 17829 . + . ID=g137.t1.exon5;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 17291 17829 . + 2 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 18028 18466 . + . ID=g137.t1.exon6;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 18028 18466 . + 0 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 18760 18824 . + . ID=g137.t1.exon7;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 18760 18824 . + 2 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 18965 19086 . + . ID=g137.t1.exon8;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 18965 19086 . + 0 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . exon 19276 19927 . + . ID=g137.t1.exon9;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . CDS 19276 19684 . + 1 ID=cds.g137.t1;Parent=g137.t1 NODE_229_length_30388_cov_60.7453 . three_prime_UTR 19685 19927 . + . ID=g137.t1.utr3p1;Parent=g137.t1 #PROT g137.t1 g137 MATVALPEVLSRVGPAVSLPQTVFRRLANEEIVSYLIAFGEHAAWKTRDAVVRPASGSVYLFDRIQTKLFRKDGYDWKKRKGGTSIREDHMKLMVHGVKCLYGCYAHAADGTPFHRRTYWLVQHPGVVLVHYLDERDCLSDHLSLDIAGIASGDAEADEEGDDDNGENDADEDVHGGDDAFAFFTEGLDAGQSQGTQPPIAELQFVSEIFAASGLDHLGSLGGDLSGGAAAVGCVSAPVTWNAPTGIKTEEVDLDWTALAAAVTRADQVSASNEQRMGLHMDSVAQQNNLLLQAFAAAEEQQAPQFQGGASLQQQQGRSTHDRAPPVPVVTPRRRGRASNAGSIGGRMDFVVGVGPGTGGGVTPGPSPKKHRLSLPFTHSMDTLMGTASPTVPPEPMQQGPFSSSSSFVTASRESVGESQPLGQTEALSQQSTPMDWIDAMRVGAGGGIVGDGRLQQPKKSSHDNAAKTAHLRSLSFGAVESPVLESGLTPATASLPGARYGAGSFTQWISRQPSAKQKQQQQQPQQLQFQQQHQLQQQQIKQLQLQVQQKPRVVDFSPDSCDVGVGVKVLLIGQFGPMTASYRCSFGGVSVPAEAIQEGVLRCNAPAAPAAGKVALTVHRDDCSDHSTAVWFEYRQPTVVTALPEWLVVDAPAFRARLVERVRLLECLSIGGDVSSLSPVDPLMLGEVAGVEDALVAAVQRIVVSVQVSSIAEQVGAGSWGANLGGAGGRLPPGSTHATDPKGMTALHLACSLGLPRLAGTLKGLYDAAAESPGLRAVADAHNFNPDEREVRMRRFLELVAAETETTALDFARCSALQWACVAGSFDIAKVLVSADASVLSLRDAWNRSPAEIARTNNHTLLADALATHGRSDEASATVAIGGLSAASERRRTSSDVSSKESRHSRASSFSFNRDDGKGSPLLAADRDAPDVGLANLNQSAGGVSGKGMVAEMWADVMAGSSSGLLDREFSELTLRDRDYIELYRAARIIQSAFRDYKGSQRRKQMVDAAVVIQSHFRRYKEGAKIKQMHEAAARIQNRYRTYRQHLHFLESKHAAVTIQRQFRERRERKQRMQSQVDRERRLEAHTANRMRTTSSSDVGSGSTGDNRDLPGGRLSRRMSLTDFSFFAASGTNNAVVPMQCQDASSGKDNALAQSLDGCLDLSNFAPSVSAMGV* # ORIGINAL: g140.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 25879 26939 . - . ID=g140;Name=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 25879 26939 . - . ID=g140.t1;Parent=g140;Name=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 26383 26939 . - . ID=g140.t1.exon1;Parent=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 26383 26939 . - 0 ID=cds.g140.t1;Parent=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 26152 26288 . - . ID=g140.t1.exon2;Parent=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 26152 26288 . - 1 ID=cds.g140.t1;Parent=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 25879 26036 . - . ID=g140.t1.exon3;Parent=g140.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 25879 26036 . - 2 ID=cds.g140.t1;Parent=g140.t1 #PROT g140.t1 g140 MDAAANRRKQLAGTVGALLNPQIAEREYVKRRITPPEPKNHMKENARRVRQKEREMKRKKEEANKPPKPLFKMPRFEKVESKTAEHIETFQTPAPSKEASNFLRKGEKVGPPTKPPPREHFDRSRIPLSVPAANDLAHIPARTHKNFIRNNAVEVIEGRVRSAKSRDSPSPTPDPPTHVKGQIPNYLRERKSQWREEEKRKKDAEPDPDAPPGMVLMPASERLETLAMLKKNHAEMLRQLQSMPMMADTIGLRQRRAAVEHKLGEIEEAIDIFSRPKVFVHPK* # ORIGINAL: g142.t1 original gene structure, not modified by PASA NODE_229_length_30388_cov_60.7453 AUGUSTUS gene 29087 29511 . - . ID=g142;Name=g142.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS mRNA 29087 29511 . - . ID=g142.t1;Parent=g142;Name=g142.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 29427 29511 . - . ID=g142.t1.exon1;Parent=g142.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 29427 29511 . - 0 ID=cds.g142.t1;Parent=g142.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS exon 29087 29277 . - . ID=g142.t1.exon2;Parent=g142.t1 NODE_229_length_30388_cov_60.7453 AUGUSTUS CDS 29087 29277 . - 2 ID=cds.g142.t1;Parent=g142.t1 #PROT g142.t1 g142 MFSSDLTSNELQGIFSHIVCNCLWVFSTCDEYIPDGIDAKALGMRLSAACGGQSEAVFIEGANHAISNDPKCIELFVKRASEFVRACVGTP* # PASA_UPDATE: g9961.t1, single gene model update, valid-1, status:[pasa:asmbl_4358,status:3], valid-1 # PASA_UPDATE: g9961.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4357,status:3], valid-1 NODE_2459_length_6196_cov_37.4836 . gene 2718 4885 . - . ID=g9961;Name=g9961.t1 NODE_2459_length_6196_cov_37.4836 . mRNA 2718 4885 . - . ID=g9961.t1;Parent=g9961;Name=g9961.t1 NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 4560 4885 . - . ID=g9961.t1.utr5p1;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 4260 4413 . - . ID=g9961.t1.utr5p2;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 4154 4167 . - . ID=g9961.t1.utr5p3;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . exon 4560 4885 . - . ID=g9961.t1.exon1;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . exon 4260 4413 . - . ID=g9961.t1.exon2;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . exon 2718 4167 . - . ID=g9961.t1.exon3;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . CDS 3287 4153 . - 0 ID=cds.g9961.t1;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . three_prime_UTR 2718 3286 . - . ID=g9961.t1.utr3p1;Parent=g9961.t1 NODE_2459_length_6196_cov_37.4836 . mRNA 2718 4885 . - . ID=g9961.t1.1.5b6be70b;Parent=g9961;Name=g9961.t1 NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 4260 4885 . - . ID=g9961.t1.1.5b6be70b.utr5p1;Parent=g9961.t1.1.5b6be70b NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 4154 4167 . - . ID=g9961.t1.1.5b6be70b.utr5p2;Parent=g9961.t1.1.5b6be70b NODE_2459_length_6196_cov_37.4836 . exon 4260 4885 . - . ID=g9961.t1.1.5b6be70b.exon1;Parent=g9961.t1.1.5b6be70b NODE_2459_length_6196_cov_37.4836 . exon 2718 4167 . - . ID=g9961.t1.1.5b6be70b.exon2;Parent=g9961.t1.1.5b6be70b NODE_2459_length_6196_cov_37.4836 . CDS 3287 4153 . - 0 ID=cds.g9961.t1.1.5b6be70b;Parent=g9961.t1.1.5b6be70b NODE_2459_length_6196_cov_37.4836 . three_prime_UTR 2718 3286 . - . ID=g9961.t1.1.5b6be70b.utr3p1;Parent=g9961.t1.1.5b6be70b #PROT g9961.t1 g9961 MTKDEDMSSLLSNLMHLEGNVLQSNAVTGASGRKEPGTQRRATVSYVPKTASNLNAVQKKDFHRAMDDADKAHRMAADSTASTMRSLKQRLEQLETTKDTPAPVGKNTRQRLSVSVSGPSSSGAPVTMKAGTATSTPAMSATDTKTPRTLTKSQFTIVPRTASTTSETAPTFNVAELSEELDAMANAGSRSHSPAGALSPLRTRSPLGGASTATQPTTQSVAQTTTTQATLSAERGSSGRKRSLSDASASSAAAIASSTGGAQPSQSTPHSTLRKTVSNTSAGLLPPI* #PROT g9961.t1.1.5b6be70b g9961 MTKDEDMSSLLSNLMHLEGNVLQSNAVTGASGRKEPGTQRRATVSYVPKTASNLNAVQKKDFHRAMDDADKAHRMAADSTASTMRSLKQRLEQLETTKDTPAPVGKNTRQRLSVSVSGPSSSGAPVTMKAGTATSTPAMSATDTKTPRTLTKSQFTIVPRTASTTSETAPTFNVAELSEELDAMANAGSRSHSPAGALSPLRTRSPLGGASTATQPTTQSVAQTTTTQATLSAERGSSGRKRSLSDASASSAAAIASSTGGAQPSQSTPHSTLRKTVSNTSAGLLPPI* # PASA_UPDATE: g9962.t1, single gene model update, valid-1, status:[pasa:asmbl_4356,status:12], valid-1 NODE_2459_length_6196_cov_37.4836 . gene 5393 6097 . - . ID=g9962;Name=g9962.t1 NODE_2459_length_6196_cov_37.4836 . mRNA 5393 6097 . - . ID=g9962.t1;Parent=g9962;Name=g9962.t1 NODE_2459_length_6196_cov_37.4836 . exon 6083 6097 . - . ID=g9962.t1.exon1;Parent=g9962.t1 NODE_2459_length_6196_cov_37.4836 . CDS 6083 6097 . - 0 ID=cds.g9962.t1;Parent=g9962.t1 NODE_2459_length_6196_cov_37.4836 . exon 5393 5954 . - . ID=g9962.t1.exon2;Parent=g9962.t1 NODE_2459_length_6196_cov_37.4836 . CDS 5613 5954 . - 0 ID=cds.g9962.t1;Parent=g9962.t1 NODE_2459_length_6196_cov_37.4836 . three_prime_UTR 5393 5612 . - . ID=g9962.t1.utr3p1;Parent=g9962.t1 #PROT g9962.t1 g9962 MISFSVTGLCRRVRPIPAASIGSWNTVLWVILGVSVLTNSLLSGLSSHQLASVFTSDSTEDVTADHVALAFGVEHVMLAVVMLIRRIVPKIPEDIATAEARRHHIVREAAFSKMLSCD* # PASA_UPDATE: g9960.t1, single gene model update, valid-1, status:[pasa:asmbl_4355,status:12], valid-1 NODE_2459_length_6196_cov_37.4836 . gene 189 2461 . + . ID=g9960;Name=g9960.t1 NODE_2459_length_6196_cov_37.4836 . mRNA 189 2461 . + . ID=g9960.t1;Parent=g9960;Name=g9960.t1 NODE_2459_length_6196_cov_37.4836 . five_prime_UTR 189 189 . + . ID=g9960.t1.utr5p1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . exon 189 343 . + . ID=g9960.t1.exon1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 190 343 . + 0 ID=cds.g9960.t1;Parent=g9960.t1;5_prime_partial=true NODE_2459_length_6196_cov_37.4836 . exon 616 749 . + . ID=g9960.t1.exon2;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 616 749 . + 2 ID=cds.g9960.t1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . exon 1003 1065 . + . ID=g9960.t1.exon3;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 1003 1065 . + 0 ID=cds.g9960.t1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . exon 1271 1387 . + . ID=g9960.t1.exon4;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 1271 1387 . + 0 ID=cds.g9960.t1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . exon 1624 1761 . + . ID=g9960.t1.exon5;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 1624 1761 . + 0 ID=cds.g9960.t1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . exon 1935 2461 . + . ID=g9960.t1.exon6;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . CDS 1935 2366 . + 0 ID=cds.g9960.t1;Parent=g9960.t1 NODE_2459_length_6196_cov_37.4836 . three_prime_UTR 2367 2461 . + . ID=g9960.t1.utr3p1;Parent=g9960.t1 #PROT g9960.t1 g9960 SDNVPAHSILIDHTYCARDTEETFRLRKKANCFIIGPVVESAGGRSYVLSVETDELKVLWMSRFQAALVGRSAAEMNEPKMGRARAQSHFRKSLPLSSGSLDAPVATVIADPEWRLKAWQRLVDVTSSKEWRNHDPKDGVTICRMPFKSGQPAAFKVETTIRCPPYIVLEFLKEALSPGGKFDYPFRGLELLLEYNEAPRCKVLTGVYDVPLPGVDPRSACLMRMWMGTQDTAILPVPPALSPLAAGLKGLLLVSVKHEAAASTKQSQGVLMWESGVILRSVFGQPGGMYGEHTLMQTVVQVDLGGSLQQMLKGAYRTGIVKMPVRSEYVRLRELAESHAGLTTH* # PASA_UPDATE: g4545.t1, single gene model update, valid-1, status:[pasa:asmbl_3901,status:12], valid-1 NODE_226_length_30479_cov_41.9514 . gene 28066 30387 . - . ID=g4545;Name=g4545.t1 NODE_226_length_30479_cov_41.9514 . mRNA 28066 30387 . - . ID=g4545.t1;Parent=g4545;Name=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 30271 30387 . - . ID=g4545.t1.exon1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 30271 30387 . - 0 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 29774 29917 . - . ID=g4545.t1.exon2;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 29774 29917 . - 0 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 29487 29558 . - . ID=g4545.t1.exon3;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 29487 29558 . - 0 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 29131 29177 . - . ID=g4545.t1.exon4;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 29131 29177 . - 0 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 28875 28896 . - . ID=g4545.t1.exon5;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 28875 28896 . - 1 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 28483 28610 . - . ID=g4545.t1.exon6;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 28483 28610 . - 0 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . exon 28066 28324 . - . ID=g4545.t1.exon7;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . CDS 28150 28324 . - 1 ID=cds.g4545.t1;Parent=g4545.t1 NODE_226_length_30479_cov_41.9514 . three_prime_UTR 28066 28149 . - . ID=g4545.t1.utr3p1;Parent=g4545.t1 #PROT g4545.t1 g4545 MRLMFRFYDVVSGDIFVDGQNISHITQTSLRRSIGVVPQDTVLFHDDIRYNIRYGRMDASDEEVEAAARNADMHDRIMSFPEKYETIVGERGLRLSGGEKQRVAIARTLLKAPKIVLLDEATSALDSETERHIQASLAAVCANRTTLVIAHRLSTIINSDVILVLDDGLIKERGTHKELLLMKGLYADMWARQLESQEDGGVTQDATIKTTEQTPTLTTPAPAVHGQGHGHGRR* # PASA_UPDATE: g4544.t1, single gene model update, valid-1, status:[pasa:asmbl_3904,status:12], valid-1 NODE_226_length_30479_cov_41.9514 . gene 18190 27610 . + . ID=g4544;Name=g4544.t1 NODE_226_length_30479_cov_41.9514 . mRNA 18190 27610 . + . ID=g4544.t1;Parent=g4544;Name=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 18190 18333 . + . ID=g4544.t1.exon1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 18190 18333 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 18545 18618 . + . ID=g4544.t1.exon2;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 18545 18618 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 18756 18963 . + . ID=g4544.t1.exon3;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 18756 18963 . + 1 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 19089 19235 . + . ID=g4544.t1.exon4;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 19089 19235 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 19384 20093 . + . ID=g4544.t1.exon5;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 19384 20093 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 20423 20702 . + . ID=g4544.t1.exon6;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 20423 20702 . + 1 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 20884 21584 . + . ID=g4544.t1.exon7;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 20884 21584 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 21858 22037 . + . ID=g4544.t1.exon8;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 21858 22037 . + 1 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 22264 23364 . + . ID=g4544.t1.exon9;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 22264 23364 . + 1 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 23590 24260 . + . ID=g4544.t1.exon10;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 23590 24260 . + 1 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 24529 24776 . + . ID=g4544.t1.exon11;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 24529 24776 . + 2 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 25026 26753 . + . ID=g4544.t1.exon12;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 25026 26753 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 26962 27195 . + . ID=g4544.t1.exon13;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 26962 27195 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . exon 27348 27610 . + . ID=g4544.t1.exon14;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . CDS 27348 27491 . + 0 ID=cds.g4544.t1;Parent=g4544.t1 NODE_226_length_30479_cov_41.9514 . three_prime_UTR 27492 27610 . + . ID=g4544.t1.utr3p1;Parent=g4544.t1 #PROT g4544.t1 g4544 MSGNVEIGFAERFALASDRNAVLNELLSGTDDYFYYRILHLLNTGTFKNAGSFKDVDRLLEEYKQAFRYNHPRYDELWMRRQLIAYGVGDKALVEQALGFLKDKFLVSFDDEREVTHQADDEPPAYPDRIDPASVDTVKLMKALVKSSPQAIDGFHATAMDWLLSADISKQQRRALLSRLTAADHGTALVKAIADDLDWNDNGFTPKYGYFAVHRMLSLQQMQDLLAARPLLVNDTSFFSELLQRMVPTDDVDLTCNPAEMVAYIDRLLAFVTPRAGPALASLRSALLFRRIKLDLELNTIDEGRLVAYLEIPKSSGVCSNAYRQKKQEKQPPATLFERLNIPLVDAIEDDKEIVSDYLARIFAEPSRDSFRPFDTYIEDTFVKRVFAESRLMAGVGKPEQLTAMLGSQADVERIRSDVVVAFCPDNRRFYGALDPVRVLIDVKNVPSLTVKVFEMNMLAFYRENSDGDVNANVNLDGLVATVEQTITCTEPPIRKVRRAIDLPQCAEAGVYVVEIIGGGKSTRAIIRKGRLRFVERTGVAGHVISVVDEDGASVGASCTVTLIDGGAAPVEYAADTDGTVAIPFTTRPGRRVIVLTKGKLCTRGHFDHAEESYALQARFSVDKGSLVAGNPRVDVIVTPTLRLCGRTVTTRVLEDAYVTVKTVDSEGITASRRYPVALSDNEDTVVTFAMPERVSALEFVLTAAVKKTDGTKEALSASMNVAVSDSSSDVDNAFFRFRDGQYEVCFLGRTGEPRVKCVCTVRLHHRYLVNQVTSVLQSDADGIVKLGSLADIESIDVAWGNRNAQWTVPRDQCRHPSVIPIVEGSDVVISAFSQYVPLGAVPVSVRELRRGTNVRDCSSKAIIGVDGLARISGLERGVYSVRVNVAWHSSEFTVMVAPRTARPLGGRYAVTPTRVLDVTEIRPAHIGGVEQSAPHGSVRVRVANATAGTRVHCVLGHFVDANTWVEASFGRESDSPSDFVETNAQPSDYVAARVLGDEEKYVIDRRQKGTLMVGNMLARPSLLIKPFAVGDAKTAVVGAEGGSAYGASAAPKMYRSAPMVGGMCAAAYCAPSSVSCDFLEKPTVVLANLRPSADGYVDIPRSAVEASSCSLARIVVIDGASVQQRLVPLTSVSGAANAARPYRDLRQLTTLDPARHYMEQKESTVLTAGGEVIVQDPKACKIEIYDSIAKVFRLLQALHPGDAALTDYDFLLRWDGMAPAEKRRLYAANACHELNFFLFKRDPAFFSASVRPLLTNKLDKSFVDRFLLGESLAEYELPSRFERLNVFERSLLALRAVDAADKKSFATSVAEMARGSRVTPREEARLFGVALGGTALDGSNDEDGDHDEHDEHNAGSQDGSESDGQNDEMEEMHIEQQSLRGAPAMPGMMSMARGGAPMMTRMARGAPGGPPGGAPPMFIAMAMPPPPPMGLMMMSDGSANFSSVAFDADTDGDMLRREAAPQRALYRGVDKTKELAETYYLKMRANDDTRRIVRPSAFWTDYACHCATASANAAFLSKNLHLIGSGATDGILAIAVLGLPLQLDASAGTPVTVQKERARIVLRAQSGSAVVYSRQTREIAAEGASAKQSDARVMVFETTTRKSEHDGGSDDEDGDGDGAIEAGTEANPVIPHCVYRTRVVLSNASGKLRRVEVMVQIPEGALPVGDSKYTSSQPKEIPAFSMVTVDYTWYMPSPGNYAHYPAQVTCAGSLIGWGTPRRIVVSAKAGVVAGASWEIVSQSGTEAQVLDMMRAAQRPSDVPLARIAWRAKQRSFFTQCVSVLRARRWYDPAVWKYALEHSDAGAIAEWLSKQCVPASLPAIPPLLRLGPTARGQYEHLEYSPLVNARAHVLSSTRKIPNATMAAQYTRFLQRVSQVPQLSHEDRLEAAHYLLIQDRTAEARDVAGPVLAAGDVMCAMQRDYLAAYLEFYDIGSDLTRAAAIAERYSPATVGRWGDMFADVKRHVAEVRASASALSAVASSGAAGSSDGAAAAAAGPAERSLSFEVSGGKVSVTCRGLEGRAGEARFYAMDTELLFSSNPFVQQNTGRFLYVRPNRVVAFIAPADAGEITIEMPAEFATRNSILEVCIEDVRRTAPVYSSGLSVQISEAAGTLRVTSTSEKRPIPGAYVKVYSERDGGAVNFYKDGYTDLRGCFDYVSLSTDDLDTTRKFALLVATEKLGSVVRECAPPKR* # PASA_UPDATE: g4542.t1, single gene model update, valid-1, status:[pasa:asmbl_3902,status:12],[pasa:asmbl_3903,status:12],[pasa:asmbl_3906,status:12], valid-1 NODE_226_length_30479_cov_41.9514 . gene 2023 12255 . + . ID=g4542;Name=g4542.t1 NODE_226_length_30479_cov_41.9514 . mRNA 2023 12255 . + . ID=g4542.t1;Parent=g4542;Name=g4542.t1 NODE_226_length_30479_cov_41.9514 . five_prime_UTR 2023 2107 . + . ID=g4542.t1.utr5p1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 2023 2346 . + . ID=g4542.t1.exon1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 2108 2346 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 2734 3117 . + . ID=g4542.t1.exon2;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 2734 3117 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 3334 3492 . + . ID=g4542.t1.exon3;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 3334 3492 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 3695 4256 . + . ID=g4542.t1.exon4;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 3695 4256 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 4410 5045 . + . ID=g4542.t1.exon5;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 4410 5045 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 5329 5521 . + . ID=g4542.t1.exon6;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 5329 5521 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 5660 6592 . + . ID=g4542.t1.exon7;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 5660 6592 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 6812 7692 . + . ID=g4542.t1.exon8;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 6812 7692 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 8017 8173 . + . ID=g4542.t1.exon9;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 8017 8173 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 8372 8492 . + . ID=g4542.t1.exon10;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 8372 8492 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 8801 9049 . + . ID=g4542.t1.exon11;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 8801 9049 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 9314 9497 . + . ID=g4542.t1.exon12;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 9314 9497 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 9766 9793 . + . ID=g4542.t1.exon13;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 9766 9793 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 10073 10141 . + . ID=g4542.t1.exon14;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 10073 10141 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 10338 10425 . + . ID=g4542.t1.exon15;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 10338 10425 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 10567 10711 . + . ID=g4542.t1.exon16;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 10567 10711 . + 1 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 10878 11025 . + . ID=g4542.t1.exon17;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 10878 11025 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 11172 11270 . + . ID=g4542.t1.exon18;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 11172 11270 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 11503 11648 . + . ID=g4542.t1.exon19;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 11503 11648 . + 2 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . exon 11897 12255 . + . ID=g4542.t1.exon20;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . CDS 11897 11950 . + 0 ID=cds.g4542.t1;Parent=g4542.t1 NODE_226_length_30479_cov_41.9514 . three_prime_UTR 11951 12255 . + . ID=g4542.t1.utr3p1;Parent=g4542.t1 #PROT g4542.t1 g4542 MHSQSSGAPCRRRRMAVAELALVCAFVVCICTAFVEAAPAVGGAGGALYFASPFNLMSIGSDKTVSNFPSDEITIEFWTKYVNDFKYKSRSGYCIISYASDSVVSGANTYKDDNVITWSTFGDKMAIYVLPSANKGKTFNPPSAPALDYNSWHHWAVSYNRTNGFIGIYFDGAVLLETTSADLKGVAMPATGAFVVGQDQDSLYGGFDPTQAFVGYIDELRIWSTTRSAAQIQANKDTVAVGNEPGLWGYWNFDEGTGDWAYNQVDKARNNFLLGGVASDSSCGASASDKKPLWAVSSAPITGRGDTFALVNRALTPIKFLSTAGAVVTIGDVAASNCSGNAQFFKDAAGTIPLANGDALASDNIAYLNVTATPFNGCTVPYTATQGGATTGVLRLLLNNAPVAVDRTIVADEDSTEIVFGLGGTDAENDQIKQVIISTLPSQGLLYALKSDYTRDFAILSAPATLTTLGGGVQFVPYPNTNGLPYTTFQYSIIDWAGARSATKTVTININSVDDLPIATNNPYHLTFEAVDEMRLPLVDLSTYSAFTLSMYIRIPTAPATRANILATRPDPQFSLDVTQAGLVRFLIAGTVTASATITFSEAWRHIAVVRTSAAVTMYIDGVVSATTGIASTNNAFTSTSILVGGTYGGNPGFIGTFDESFIFNSASDAAFVTTLRKFKVLSNDSRFSNLVGGSSFDVGTGYFATCINSLGLCPNNMNHVLGNGDASKYPAWTEMPAKIAAQYATYPLFNEVKTNEDTQVIITLDALDIDTQTQGTAALLITPPTQGTLYQYNASAPNFRGAKLEPYLFWKNTLEPVTQFAYKVPAMPNTVPCCNKTTFFSLANMNAASSSQCAWCERADSSLQMGTQYDLASYGVFALLYNDGKPVRYNPDLPNKGYGDYEYSLSPSTTADTPSGGTRDCVNPPASPTLQDPLNWSCPNGENDFFDIGFEKPLYLTGVSVYENYNPGATVRIAGRIAGNQWITLWSGAPQLGLYDEKGTYISGVYNVFQPAVCQSVYPVNAIRVERATHLVPSWNEVESVSMTGTSALKDGIVNPSLKVVYVPNKDVNGALIDSFQYTATDCPFNSAREAPLGTRYISITPVNDLPTAPDAPVTGSAAEGTLSPIVLRAVDVDGNETLTFRLSTQPRFGSLQYNGAPFSSSTIRAVGINANLTLVYIPSGCGIESFSYTVTDSVGTSDPIPISIPTTCKSSGLAAYVIAVPVVLGTAALFLIIFGLWYRNYKKRQEFEAQLNSMAWRINYAEINTTTAKGAGSGLFQSKASLKSGGSNTSSRGSHGREQMFTTVGRHKGQTVAIKAINKKAVAVTRELCYEMHQVREMSHPNIARFVGACIDPPNIAVVMEYCNKGSLQDVLANPHYQIDWMFKFSLLGDLARGMSFLHSSEIGFHGRLKSSNCVVDSRWTLKVTDYGLFKFKEGQIEDEEAGEYAKLTAMLWSAPEILRGEAPARGTQQGDYYSYGIIMNEIITRDIPFAEAQLEVSDIIAKVKTGGLRPQFPGEDVPAEYSALAERCWAEGAFERPTFTTILHEIRRINPDKSDNVLEHMSKMLEKYANNLEGLVEERTEQLNEEKKKTEDLLYRMLPRAVAEDLKVGKQIKAESFDQVTIFFSDIVGFTDIAGKSTPLQVVDFLNDLYTCFDSIIDAYDVYKVETIGDAYMVVSGLPVRNGNRHAGEIATMALDLLCATTNFKIRHLPDLYLQLRVGMHTGPAVAGVVGLKMPRYCLFGDTVNTASRMESGGFALRIHMSESTANVLRELGGYQVELRGTLAVKGKGDMTTYWLIGKDGWTKRLPDMSKAASHSQHHFK* # ORIGINAL: g4543.t1 original gene structure, not modified by PASA NODE_226_length_30479_cov_41.9514 AUGUSTUS gene 13686 17285 . + . ID=g4543;Name=g4543.t1 NODE_226_length_30479_cov_41.9514 AUGUSTUS mRNA 13686 17285 . + . ID=g4543.t1;Parent=g4543;Name=g4543.t1 NODE_226_length_30479_cov_41.9514 AUGUSTUS exon 13686 17285 . + . ID=g4543.t1.exon1;Parent=g4543.t1 NODE_226_length_30479_cov_41.9514 AUGUSTUS CDS 13686 17285 . + 0 ID=cds.g4543.t1;Parent=g4543.t1 #PROT g4543.t1 g4543 MATAIEMSPAKRSSMVALPGLAKASPTFTVDIPDKAKDNDASDAKQSGCCGGWWSRMQRWQKICFILAIIGLLILVIALLAVYVIAPAIAQDSVDNSRFVMTSIVMTNPTANSVMVKGTTMVYNAGSMDATVEAAVVTVSYLGTVFGTITLPEIQIKANKPTQVYMSSPLTVSNNNVFRTAATKLLAGSDTYWSFNGHLTVKASFGITLSMGVSLNKPVVIPGILIQQSTAFDVTIVGGETPGVLNTTVGQTFVSTSINTLSNIGLVAFNLYGYKNESDASLDNNAIPIGIVTIANFGVAQGLNNFDAVKVDLVQRDAASISAIRHLLSNYNTGKDTVLRIVGPIVCASPFFINTSNIQTVLRGAQMHTLAVAANINLQSVAGQGVFLTGYNPYTKPVLQSNMNFQVSTTAPIPAYTYRSLTTTVQCPETHAFSTLYQPIGSNFTLPAQGMATTLMGLAPAQGQSLDCFLSAPQAVMCLSAATGKIEFEVATAGTMKITFDNFNSIIDYSQPLAPTFFESLVHIVAAAQYQCAGYNFTTELEYTPVLRACPTGVNGTSQSLVSVSPAGAITDVEQEWRAARLAAIQAPQQRPDGSNTSDWQAYLNGLALDGLDASTVTLPVIGVAASGGGYRAMFNTAGVLSALDARNPAAVANGTGGILQSAAYFAGLSGGGWMVGSMYNHDFAPAEDIVASFGNFSFWEPNAHAGTVGIAEGWGDVFYRVANKKFAGYNVSLTDLWGQMLSQQMMEDDNMRLSDLASHPIIANHAAPLPILTSAQVYPGNVNGTTNVWTWSPLQSEIAGIGGGSGKAGLTASFNPNILGTAMNGGYAVSDNSCVNNMDNLGYIVGMESAAFEVSVANIVGIVCSDAAPKIVGIDAAVAGIVCTEATAFLQHKINGQAVCVGIFTSGAIGPNVPDALINFLTKYVCADFAGITNVDDLVAAIKLMLPVITFAVKSGCPLIAPQADCDALLADVMWLQDNLNTIQKVLDAVQTFLEKYGDVRPVPPATVANPFYGISEIAAADSRLAAAPQVGSIDGFFAGEMNVPFWPLLQSGRGVQYIVAIDSFPNGGALINAATFASDHGVTFPAVPMTLGEYQKNNKALLNTVTLFGCRQPSVPTVVYVPYNHVTYNGPDPEVLQLAYTEAQIQALGLNAFAGMTGFVNQPDLAQVLGCAALDAAGNTLPAGCTTVNWTKYCYKA* # PASA_UPDATE: g7702.t1, single gene model update, valid-1, status:[pasa:asmbl_3387,status:3], valid-1 NODE_2055_length_7908_cov_40.5407 . gene 1410 5437 . - . ID=g7702;Name=g7702.t1 NODE_2055_length_7908_cov_40.5407 . mRNA 1410 5437 . - . ID=g7702.t1;Parent=g7702;Name=g7702.t1 NODE_2055_length_7908_cov_40.5407 . five_prime_UTR 5150 5437 . - . ID=g7702.t1.utr5p1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 5030 5437 . - . ID=g7702.t1.exon1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 5030 5149 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 4593 4661 . - . ID=g7702.t1.exon2;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 4593 4661 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 4115 4214 . - . ID=g7702.t1.exon3;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 4115 4214 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 3863 3968 . - . ID=g7702.t1.exon4;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 3863 3968 . - 2 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 3366 3426 . - . ID=g7702.t1.exon5;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 3366 3426 . - 1 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 3070 3158 . - . ID=g7702.t1.exon6;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 3070 3158 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 2543 2702 . - . ID=g7702.t1.exon7;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 2543 2702 . - 1 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 2133 2225 . - . ID=g7702.t1.exon8;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 2133 2225 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . exon 1410 1860 . - . ID=g7702.t1.exon9;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . CDS 1672 1860 . - 0 ID=cds.g7702.t1;Parent=g7702.t1 NODE_2055_length_7908_cov_40.5407 . three_prime_UTR 1410 1671 . - . ID=g7702.t1.utr3p1;Parent=g7702.t1 #PROT g7702.t1 g7702 MPDRQVDAVARALCKARQATATDAAGDYALAIVHYREVEELLSPDVLNTLNPLQRERLEIKLLAYHERVDALENLIAPEDEPSVFSLDFAFESIPKGTAPDQPPTNVHRKPYWLMRVLLRTMVTGGYMTPKIYVPRQVWFQTGLKLSSVSAKFMCCDTVLLYLLKLEKENIREKGGWNQLERELDELCGVLDKLQNNLSHKLNFIAEVAVPQAERQSQSGVTKGILDFSHGVLKSVSRAKHNIIKEKVADDSKYIDTLIRLLEKGQVIEEWLVFFESQEPGSCENVVGHLRRISDFFYTVLCAFVMRDFGVLLKRYLRKTCQRLTEFE* # PASA_UPDATE: g7701.t1, single gene model update, valid-1, status:[pasa:asmbl_3388,status:12], valid-1 NODE_2055_length_7908_cov_40.5407 . gene 87 989 . + . ID=g7701;Name=g7701.t1 NODE_2055_length_7908_cov_40.5407 . mRNA 87 989 . + . ID=g7701.t1;Parent=g7701;Name=g7701.t1 NODE_2055_length_7908_cov_40.5407 . five_prime_UTR 87 128 . + . ID=g7701.t1.utr5p1;Parent=g7701.t1 NODE_2055_length_7908_cov_40.5407 . exon 87 989 . + . ID=g7701.t1.exon1;Parent=g7701.t1 NODE_2055_length_7908_cov_40.5407 . CDS 129 458 . + 0 ID=cds.g7701.t1;Parent=g7701.t1 NODE_2055_length_7908_cov_40.5407 . three_prime_UTR 459 989 . + . ID=g7701.t1.utr3p1;Parent=g7701.t1 #PROT g7701.t1 g7701 MQKALNGRNAIMAKIKLHKQSEANGGISKAAAKRNGAKERRAAAKHRLREQQLAEEKTLPNGKQKVVGSSAVLGTDIASMNAANTESVVSGKTKSPKKKGGAALLGTAI* # PASA_UPDATE: g7703.t1, single gene model update, valid-1, status:[pasa:asmbl_3389,status:3], valid-1 NODE_2055_length_7908_cov_40.5407 . gene 5672 7509 . + . ID=g7703;Name=g7703.t1 NODE_2055_length_7908_cov_40.5407 . mRNA 5672 7509 . + . ID=g7703.t1;Parent=g7703;Name=g7703.t1 NODE_2055_length_7908_cov_40.5407 . five_prime_UTR 5672 5787 . + . ID=g7703.t1.utr5p1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . exon 5672 5946 . + . ID=g7703.t1.exon1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . CDS 5788 5946 . + 0 ID=cds.g7703.t1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . exon 6163 6271 . + . ID=g7703.t1.exon2;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . CDS 6163 6271 . + 0 ID=cds.g7703.t1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . exon 6597 6719 . + . ID=g7703.t1.exon3;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . CDS 6597 6719 . + 2 ID=cds.g7703.t1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . exon 7096 7114 . + . ID=g7703.t1.exon4;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . CDS 7096 7114 . + 2 ID=cds.g7703.t1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . exon 7360 7509 . + . ID=g7703.t1.exon5;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . CDS 7360 7438 . + 1 ID=cds.g7703.t1;Parent=g7703.t1 NODE_2055_length_7908_cov_40.5407 . three_prime_UTR 7439 7509 . + . ID=g7703.t1.utr3p1;Parent=g7703.t1 #PROT g7703.t1 g7703 MHPENVGLPEGWEARESKSHGGKVYYLNIHNKKSQWDRPTQPAPSGGGDGDHKVRASHLLVKHRESRRPASWKDPNITRSKEEALQKLLAYREAITSGSKDFAALAQTESDCSSAQKGGDLGFFGRGDMQKPFEDATYSLKVGELSEPIWTDSGVHIILRTA* # ORIGINAL: g2596.t2 original gene structure, not modified by PASA # ORIGINAL: g2596.t1 original gene structure, not modified by PASA NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS gene 13574 14593 . + . ID=g2596;Name=g2596.t2 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS mRNA 13574 14593 . + . ID=g2596.t2;Parent=g2596;Name=g2596.t2 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS exon 13574 14593 . + . ID=g2596.t2.exon1;Parent=g2596.t2 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS CDS 13574 14593 . + 0 ID=cds.g2596.t2;Parent=g2596.t2 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS mRNA 13574 14101 . + . ID=g2596.t1;Parent=g2596;Name=g2596.t2 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS exon 13574 14101 . + . ID=g2596.t1.exon1;Parent=g2596.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS CDS 13574 14101 . + 0 ID=cds.g2596.t1;Parent=g2596.t1 #PROT g2596.t2 g2596 MDNKARLRAIAKAYQDGTFPHDLVLLVGQSKARVLCDRFMLAMASPVLRDMLRVAQVDEATNQYVLELPDDSPDDFADLIAVLYLGHKKLNYARGVDWVFCLADKYEIADVSVFSKKGMRVLNPKSALRMLAEVKNPLVKKGCVKYLAKTATTSLELLEGTNRTDLTVAGVPFPHAAVEEILASDDLFISKKTLSKLKLLGFSMERFDSWKCPTSGYLSWKQMPPGACSQVHRWSFTYESEITRHKGYFHFPDCWEMWKIILFQDDNNAVVSIRTTTGHNLKQLPYNHALSLSNDDGETFAVRLVDDDSDATYESVDPCERLFSAGYLHVDLLIEEVQS* #PROT g2596.t1 g2596 MDNKARLRAIAKAYQDGTFPHDLVLLVGQSKARVLCDRFMLAMASPVLRDMLRVAQVDEATNQYVLELPDDSPDDFADLIAVLYLGHKKLNYARGVDWVFCLADKYEIADVSVFSKKGMRVLNPKSALRMLAEVKNPLVKKGCVKYLAKTATTSLELLEGTNRTDLTVAGVPFPHA # PASA_UPDATE: g2595.t1, single gene model update, valid-1, status:[pasa:asmbl_13,status:12], valid-1 # PASA_UPDATE: g2595.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_15,status:12], valid-1 # PASA_UPDATE: g2595.t1.2.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_14,status:12], valid-1 # PASA_UPDATE: g2595.t1.3.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_17,status:12], valid-1 # PASA_UPDATE: g2595.t1.4.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_16,status:12], valid-1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . gene 2134 11043 . + . ID=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . mRNA 2134 11043 . + . ID=g2595.t1;Parent=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 2134 11043 . + . ID=g2595.t1.exon1;Parent=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 2134 11043 . + 0 ID=cds.g2595.t1;Parent=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . mRNA 2134 11043 . + . ID=g2595.t1.1.5b6be70a;Parent=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 2134 9489 . + . ID=g2595.t1.1.5b6be70a.exon1;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 2134 9489 . + 0 ID=cds.g2595.t1.1.5b6be70a;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 9748 10417 . + . ID=g2595.t1.1.5b6be70a.exon2;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 9748 10417 . + 0 ID=cds.g2595.t1.1.5b6be70a;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 10547 11043 . + . ID=g2595.t1.1.5b6be70a.exon3;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 10547 11043 . + 2 ID=cds.g2595.t1.1.5b6be70a;Parent=g2595.t1.1.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . mRNA 2134 11043 . + . ID=g2595.t1.2.5b6be70a;Parent=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 2134 9672 . + . ID=g2595.t1.2.5b6be70a.exon1;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 2134 9672 . + 0 ID=cds.g2595.t1.2.5b6be70a;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 10189 10417 . + . ID=g2595.t1.2.5b6be70a.exon2;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 10189 10417 . + 0 ID=cds.g2595.t1.2.5b6be70a;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 10547 11043 . + . ID=g2595.t1.2.5b6be70a.exon3;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 10547 11043 . + 2 ID=cds.g2595.t1.2.5b6be70a;Parent=g2595.t1.2.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . mRNA 2134 11043 . + . ID=g2595.t1.3.5b6be70a;Parent=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 2134 9672 . + . ID=g2595.t1.3.5b6be70a.exon1;Parent=g2595.t1.3.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 2134 9672 . + 0 ID=cds.g2595.t1.3.5b6be70a;Parent=g2595.t1.3.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 10318 11043 . + . ID=g2595.t1.3.5b6be70a.exon2;Parent=g2595.t1.3.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 10318 11043 . + 0 ID=cds.g2595.t1.3.5b6be70a;Parent=g2595.t1.3.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . mRNA 2134 11043 . + . ID=g2595.t1.4.5b6be70a;Parent=g2595;Name=g2595.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 2134 10417 . + . ID=g2595.t1.4.5b6be70a.exon1;Parent=g2595.t1.4.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 2134 10417 . + 0 ID=cds.g2595.t1.4.5b6be70a;Parent=g2595.t1.4.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . exon 10547 11043 . + . ID=g2595.t1.4.5b6be70a.exon2;Parent=g2595.t1.4.5b6be70a NODE_1006_length_14829_cov_23.921_potentialcontaminant . CDS 10547 11043 . + 2 ID=cds.g2595.t1.4.5b6be70a;Parent=g2595.t1.4.5b6be70a #PROT g2595.t1 g2595 MASGQPAASAARPDLVSKPPPAAQRVPTGAEKGKDREDASNTLTLPPGAPNNNTDATDNDRNSKRRRQQTTSESRDDDDDDDDDNEAWDARRVERRQRQRQPARQPVRQPDATSALEATRQPKRRRTQSSTTDPANAVVHPPLARSARGLAASPFTMPHTDDLPKLTYLSRESLRKYTVPKITYKENLDGDGRDAYRPLYITRTERLPQGDRNQSPLMTYATILQVAPDTYQPGRPLAFWTYEMFRFLPVPAGTTPIERTWTKRDRSPRVVQDERDGLKWTALKTHEPKLEDWLAAARHARWDSDDMRERNDAVLWQAFTYLYECEQTYKNANGNKETSILYGIEVPPEDRTLTCQPRYETNPEAFRIHSRQGSVVSSKRGGSVVGGGGSTVGGTSGVGGGSTVGGTSGVGGRSTVGGISGVGGGSTVGGTSGVGGGSTVGGASGEMQRVFSGRFSADHDAGSDSLTSLRAESIESSSDNNSSSSFSPTSPLANAVRTRAKRKVCGDDGEASSASIEGQVNKKIRQHQQPRRLQRVINSDDDGSDPRSFSNHHSRAGPINDGCIMTETQQRRVSPDNEAERQCIKRRRETLTGSSSSSPLNEVGNVIVDVDQRTDHRPPQNTTPFQDVWSALRADPLFTNDITPALAPRDEHETPMADIEPNESDANVDKDINKLEQDLPKSKQRPTRMLPPLRNASTARPRDDNPDGAFPSQVQLAGILYERIDAIFRQRGKEKGVGSFSRVVFRIMTARSNMLEFQTSTRLRKCVGLFSPNEHVYIGNGVGDEFRAKPGSGVDLNGFGKDVCDRFGNFYAQLIADPSVLGVFIVDECHWGPTKHQAYDMYVNLTLPRSGSERQHWDSIRASLGELWKHRNPESGELVSSHQIDNLVIVLVSATPYNQLSCKSRVPVRHLVSTNGHSVLQSTVLQGGNIIAKDAHVVDWSESQTESKFRLMVVPVESDARSDFYSVRATQDSSSSAWVLCCEQISSPGKQAADAIAALPSVGGNVCLDFVAEPAGKGLFYLEIHGVTIVYLAVQEGDRLAICNAKEERTPFVLDRRVACDIVQIRCPKGKYVTCMRTTSPSFSLTERSDLGTDDLGTQFFVCASSPDAVYYRSVNYYVNSMRSSDPDNHLIRKDGVLQSIAGDKELMKKMGKAATDAKPGKAGASKNSSIPGEILLACDYAFSILRFGVIFGDICIGEDLLDLPELHLKELLKLEDENWWLDKARTMRDYVTAIEKEGLPLTVFVSGYAKVIGESKSDWAKFLCAHAITEITIATTKYDAVKEWEWQEIRKRLITAFDTDNTDDKATSKKEFRASRSQTDIIIEDLVINRLERDKEGRLERDKEGRRRWKGNMKIIRVTESTTENLMYNSIVVASRLTGFRKAFHVLRDSENNRLIQSFSSDKDQKYWLKELQNAECPKNCGCKSFVASYAEVKCTCGHLHTPISQYEDLHGLPCILVLIDKGRMGDTFPKSFNCMDIRTSYTGTPKLSTVVQELGRMCRYARFDENVPYAVVSEKLCKLFYDGLGTAVAVRQMLTSHDGYLLGSVRNKELPWRYLSEPSAEHFDTHESIEPHNGRILFQAGPQCGKTGTYNALLRRLKEETGGQYVEMPQMEVSDDCDGKMVLWNYPYWKDMLDAGQIPKVESKSKYDDLGDDLDFQLGGPNDAIERKNIKKLVEAINKRRHAQPTGNPAPSSGNVMKPFRTKEFRFELRPFHPSEGDDHIVNEAMTWVSVRGVAEVEVRVSMPKSNDFSNLFKKCDDGRVSLTNDHGRDVRHWIFQPSHPAGDRSAENRRLDLRQALEGKSYAHAIVVRSIETYKVWAPTHNLIELPKTMKSLDEMEDDDVVESGIGYARRFIQLLAETHGLKHVFLIDDNIPHMAELDFPLRHITRDNGTESRVFQSKPCSLWAVVSQLQSQFSGESPEDRAFSLDDVRVARPDIQLQSEPNAIWQYAGNPSKYALLGTARFEHRAITEKPFKRTHVFSFALLNVEAVRASEINGASPLFPPWPFREDINFNQQCDNSRLWVCKYNRFIQLKQPTRFSPQSDHQPPSARDQRLSRPHREDSTVPAIEVSPQIHSDESDNVAAIDEPMPPLPEVPTPAPIVKNAMTFWREHWGGAEKVDWAVFWKAFVLEYPHFEGVEANIRQNWMDNGAVHSAKLHQAEWETWPINVLLVSRGQHTAQAIERLAEAGGLRVVLAAMQSARNSRTLSIVALAAYAAVHNETRKRKVGQSLDLSSVDVVVAAMKLCPTNLEVQARGCDTFAKLIHNENSASEVSGEVIELVLNAMRLQPDGAMYNNSDDERFLQLAGCKALANLAVTPDNRVTIARVGGIELLLSAVGNYATWENMQAVGWDALGSLALTSDNRAKIGREDIKLLLSAMRKFAKSKGLQAIGCHALANLASDDANSAAIAEPQIAGIEAIVAAMEAHASVADVQQNGCVALRNLAVNDNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACSALWTLAANDNNMETIADGGGIAAIVAAMEAHVSVADVQTYACSALWTLAANDSNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDNNMITIANGGGIAAIVAAMKAHLSNAGVQEVACSALWNLAVNDSNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDKNKETIAGMGGIAAIVAAMEAHVSVADLPTYACSALCTLAVNDDNKETIAGMGGIAAIVAAMEAHVSVAELQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMEAHVSVADLQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMKAHLSNAGVQEVACGALRNLAVNYNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACGALWNLAVNDSNMKTIAGMGGIAAIVVAMKEHISNADAQENACGALWNLAVNDNNKETIADRGGKAAIKAAMKAHLSNASLQENATKCLLLIEDSRRQQ* #PROT g2595.t1.1.5b6be70a g2595 MASGQPAASAARPDLVSKPPPAAQRVPTGAEKGKDREDASNTLTLPPGAPNNNTDATDNDRNSKRRRQQTTSESRDDDDDDDDDNEAWDARRVERRQRQRQPARQPVRQPDATSALEATRQPKRRRTQSSTTDPANAVVHPPLARSARGLAASPFTMPHTDDLPKLTYLSRESLRKYTVPKITYKENLDGDGRDAYRPLYITRTERLPQGDRNQSPLMTYATILQVAPDTYQPGRPLAFWTYEMFRFLPVPAGTTPIERTWTKRDRSPRVVQDERDGLKWTALKTHEPKLEDWLAAARHARWDSDDMRERNDAVLWQAFTYLYECEQTYKNANGNKETSILYGIEVPPEDRTLTCQPRYETNPEAFRIHSRQGSVVSSKRGGSVVGGGGSTVGGTSGVGGGSTVGGTSGVGGRSTVGGISGVGGGSTVGGTSGVGGGSTVGGASGEMQRVFSGRFSADHDAGSDSLTSLRAESIESSSDNNSSSSFSPTSPLANAVRTRAKRKVCGDDGEASSASIEGQVNKKIRQHQQPRRLQRVINSDDDGSDPRSFSNHHSRAGPINDGCIMTETQQRRVSPDNEAERQCIKRRRETLTGSSSSSPLNEVGNVIVDVDQRTDHRPPQNTTPFQDVWSALRADPLFTNDITPALAPRDEHETPMADIEPNESDANVDKDINKLEQDLPKSKQRPTRMLPPLRNASTARPRDDNPDGAFPSQVQLAGILYERIDAIFRQRGKEKGVGSFSRVVFRIMTARSNMLEFQTSTRLRKCVGLFSPNEHVYIGNGVGDEFRAKPGSGVDLNGFGKDVCDRFGNFYAQLIADPSVLGVFIVDECHWGPTKHQAYDMYVNLTLPRSGSERQHWDSIRASLGELWKHRNPESGELVSSHQIDNLVIVLVSATPYNQLSCKSRVPVRHLVSTNGHSVLQSTVLQGGNIIAKDAHVVDWSESQTESKFRLMVVPVESDARSDFYSVRATQDSSSSAWVLCCEQISSPGKQAADAIAALPSVGGNVCLDFVAEPAGKGLFYLEIHGVTIVYLAVQEGDRLAICNAKEERTPFVLDRRVACDIVQIRCPKGKYVTCMRTTSPSFSLTERSDLGTDDLGTQFFVCASSPDAVYYRSVNYYVNSMRSSDPDNHLIRKDGVLQSIAGDKELMKKMGKAATDAKPGKAGASKNSSIPGEILLACDYAFSILRFGVIFGDICIGEDLLDLPELHLKELLKLEDENWWLDKARTMRDYVTAIEKEGLPLTVFVSGYAKVIGESKSDWAKFLCAHAITEITIATTKYDAVKEWEWQEIRKRLITAFDTDNTDDKATSKKEFRASRSQTDIIIEDLVINRLERDKEGRLERDKEGRRRWKGNMKIIRVTESTTENLMYNSIVVASRLTGFRKAFHVLRDSENNRLIQSFSSDKDQKYWLKELQNAECPKNCGCKSFVASYAEVKCTCGHLHTPISQYEDLHGLPCILVLIDKGRMGDTFPKSFNCMDIRTSYTGTPKLSTVVQELGRMCRYARFDENVPYAVVSEKLCKLFYDGLGTAVAVRQMLTSHDGYLLGSVRNKELPWRYLSEPSAEHFDTHESIEPHNGRILFQAGPQCGKTGTYNALLRRLKEETGGQYVEMPQMEVSDDCDGKMVLWNYPYWKDMLDAGQIPKVESKSKYDDLGDDLDFQLGGPNDAIERKNIKKLVEAINKRRHAQPTGNPAPSSGNVMKPFRTKEFRFELRPFHPSEGDDHIVNEAMTWVSVRGVAEVEVRVSMPKSNDFSNLFKKCDDGRVSLTNDHGRDVRHWIFQPSHPAGDRSAENRRLDLRQALEGKSYAHAIVVRSIETYKVWAPTHNLIELPKTMKSLDEMEDDDVVESGIGYARRFIQLLAETHGLKHVFLIDDNIPHMAELDFPLRHITRDNGTESRVFQSKPCSLWAVVSQLQSQFSGESPEDRAFSLDDVRVARPDIQLQSEPNAIWQYAGNPSKYALLGTARFEHRAITEKPFKRTHVFSFALLNVEAVRASEINGASPLFPPWPFREDINFNQQCDNSRLWVCKYNRFIQLKQPTRFSPQSDHQPPSARDQRLSRPHREDSTVPAIEVSPQIHSDESDNVAAIDEPMPPLPEVPTPAPIVKNAMTFWREHWGGAEKVDWAVFWKAFVLEYPHFEGVEANIRQNWMDNGAVHSAKLHQAEWETWPINVLLVSRGQHTAQAIERLAEAGGLRVVLAAMQSARNSRTLSIVALAAYAAVHNETRKRKVGQSLDLSSVDVVVAAMKLCPTNLEVQARGCDTFAKLIHNENSASEVSGEVIELVLNAMRLQPDGAMYNNSDDERFLQLAGCKALANLAVTPDNRVTIARVGGIELLLSAVGNYATWENMQAVGWDALGSLALTSDNRAKIGREDIKLLLSAMRKFAKSKGLQAIGCHALANLASDDANSAAIAEPQIAGIEAIVAAMEAHASVADVQQNGCVALRNLAVNDNNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDNNMITIANGGGIAAIVAAMKAHLSNAGVQEVACSALWNLAVNDSNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDKNKETIAGMGGIAAIVAAMEAHVSVADLPTYACSALCTLAVNDDNKETIAGMGGIAAIVAAMEAHVSVAELQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMKAHLSNAGVQEVACGALRNLAVNYNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACGALWNLAVNDSNMKTIAGMGGIAAIVVAMKEHISNADAQENACGALWNLAVNDNNKETIADRGGKAAIKAAMKAHLSNASLQENATKCLLLIEDSRRQQ* #PROT g2595.t1.2.5b6be70a g2595 MASGQPAASAARPDLVSKPPPAAQRVPTGAEKGKDREDASNTLTLPPGAPNNNTDATDNDRNSKRRRQQTTSESRDDDDDDDDDNEAWDARRVERRQRQRQPARQPVRQPDATSALEATRQPKRRRTQSSTTDPANAVVHPPLARSARGLAASPFTMPHTDDLPKLTYLSRESLRKYTVPKITYKENLDGDGRDAYRPLYITRTERLPQGDRNQSPLMTYATILQVAPDTYQPGRPLAFWTYEMFRFLPVPAGTTPIERTWTKRDRSPRVVQDERDGLKWTALKTHEPKLEDWLAAARHARWDSDDMRERNDAVLWQAFTYLYECEQTYKNANGNKETSILYGIEVPPEDRTLTCQPRYETNPEAFRIHSRQGSVVSSKRGGSVVGGGGSTVGGTSGVGGGSTVGGTSGVGGRSTVGGISGVGGGSTVGGTSGVGGGSTVGGASGEMQRVFSGRFSADHDAGSDSLTSLRAESIESSSDNNSSSSFSPTSPLANAVRTRAKRKVCGDDGEASSASIEGQVNKKIRQHQQPRRLQRVINSDDDGSDPRSFSNHHSRAGPINDGCIMTETQQRRVSPDNEAERQCIKRRRETLTGSSSSSPLNEVGNVIVDVDQRTDHRPPQNTTPFQDVWSALRADPLFTNDITPALAPRDEHETPMADIEPNESDANVDKDINKLEQDLPKSKQRPTRMLPPLRNASTARPRDDNPDGAFPSQVQLAGILYERIDAIFRQRGKEKGVGSFSRVVFRIMTARSNMLEFQTSTRLRKCVGLFSPNEHVYIGNGVGDEFRAKPGSGVDLNGFGKDVCDRFGNFYAQLIADPSVLGVFIVDECHWGPTKHQAYDMYVNLTLPRSGSERQHWDSIRASLGELWKHRNPESGELVSSHQIDNLVIVLVSATPYNQLSCKSRVPVRHLVSTNGHSVLQSTVLQGGNIIAKDAHVVDWSESQTESKFRLMVVPVESDARSDFYSVRATQDSSSSAWVLCCEQISSPGKQAADAIAALPSVGGNVCLDFVAEPAGKGLFYLEIHGVTIVYLAVQEGDRLAICNAKEERTPFVLDRRVACDIVQIRCPKGKYVTCMRTTSPSFSLTERSDLGTDDLGTQFFVCASSPDAVYYRSVNYYVNSMRSSDPDNHLIRKDGVLQSIAGDKELMKKMGKAATDAKPGKAGASKNSSIPGEILLACDYAFSILRFGVIFGDICIGEDLLDLPELHLKELLKLEDENWWLDKARTMRDYVTAIEKEGLPLTVFVSGYAKVIGESKSDWAKFLCAHAITEITIATTKYDAVKEWEWQEIRKRLITAFDTDNTDDKATSKKEFRASRSQTDIIIEDLVINRLERDKEGRLERDKEGRRRWKGNMKIIRVTESTTENLMYNSIVVASRLTGFRKAFHVLRDSENNRLIQSFSSDKDQKYWLKELQNAECPKNCGCKSFVASYAEVKCTCGHLHTPISQYEDLHGLPCILVLIDKGRMGDTFPKSFNCMDIRTSYTGTPKLSTVVQELGRMCRYARFDENVPYAVVSEKLCKLFYDGLGTAVAVRQMLTSHDGYLLGSVRNKELPWRYLSEPSAEHFDTHESIEPHNGRILFQAGPQCGKTGTYNALLRRLKEETGGQYVEMPQMEVSDDCDGKMVLWNYPYWKDMLDAGQIPKVESKSKYDDLGDDLDFQLGGPNDAIERKNIKKLVEAINKRRHAQPTGNPAPSSGNVMKPFRTKEFRFELRPFHPSEGDDHIVNEAMTWVSVRGVAEVEVRVSMPKSNDFSNLFKKCDDGRVSLTNDHGRDVRHWIFQPSHPAGDRSAENRRLDLRQALEGKSYAHAIVVRSIETYKVWAPTHNLIELPKTMKSLDEMEDDDVVESGIGYARRFIQLLAETHGLKHVFLIDDNIPHMAELDFPLRHITRDNGTESRVFQSKPCSLWAVVSQLQSQFSGESPEDRAFSLDDVRVARPDIQLQSEPNAIWQYAGNPSKYALLGTARFEHRAITEKPFKRTHVFSFALLNVEAVRASEINGASPLFPPWPFREDINFNQQCDNSRLWVCKYNRFIQLKQPTRFSPQSDHQPPSARDQRLSRPHREDSTVPAIEVSPQIHSDESDNVAAIDEPMPPLPEVPTPAPIVKNAMTFWREHWGGAEKVDWAVFWKAFVLEYPHFEGVEANIRQNWMDNGAVHSAKLHQAEWETWPINVLLVSRGQHTAQAIERLAEAGGLRVVLAAMQSARNSRTLSIVALAAYAAVHNETRKRKVGQSLDLSSVDVVVAAMKLCPTNLEVQARGCDTFAKLIHNENSASEVSGEVIELVLNAMRLQPDGAMYNNSDDERFLQLAGCKALANLAVTPDNRVTIARVGGIELLLSAVGNYATWENMQAVGWDALGSLALTSDNRAKIGREDIKLLLSAMRKFAKSKGLQAIGCHALANLASDDANSAAIAEPQIAGIEAIVAAMEAHASVADVQQNGCVALRNLAVNDNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACSALWTLAANDNNMETIADGGGIAAIVAAMEAHVSVADLPTYACSALCTLAVNDDNKETIAGMGGIAAIVAAMEAHVSVAELQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMKAHLSNAGVQEVACGALRNLAVNYNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACGALWNLAVNDSNMKTIAGMGGIAAIVVAMKEHISNADAQENACGALWNLAVNDNNKETIADRGGKAAIKAAMKAHLSNASLQENATKCLLLIEDSRRQQ* #PROT g2595.t1.3.5b6be70a g2595 MASGQPAASAARPDLVSKPPPAAQRVPTGAEKGKDREDASNTLTLPPGAPNNNTDATDNDRNSKRRRQQTTSESRDDDDDDDDDNEAWDARRVERRQRQRQPARQPVRQPDATSALEATRQPKRRRTQSSTTDPANAVVHPPLARSARGLAASPFTMPHTDDLPKLTYLSRESLRKYTVPKITYKENLDGDGRDAYRPLYITRTERLPQGDRNQSPLMTYATILQVAPDTYQPGRPLAFWTYEMFRFLPVPAGTTPIERTWTKRDRSPRVVQDERDGLKWTALKTHEPKLEDWLAAARHARWDSDDMRERNDAVLWQAFTYLYECEQTYKNANGNKETSILYGIEVPPEDRTLTCQPRYETNPEAFRIHSRQGSVVSSKRGGSVVGGGGSTVGGTSGVGGGSTVGGTSGVGGRSTVGGISGVGGGSTVGGTSGVGGGSTVGGASGEMQRVFSGRFSADHDAGSDSLTSLRAESIESSSDNNSSSSFSPTSPLANAVRTRAKRKVCGDDGEASSASIEGQVNKKIRQHQQPRRLQRVINSDDDGSDPRSFSNHHSRAGPINDGCIMTETQQRRVSPDNEAERQCIKRRRETLTGSSSSSPLNEVGNVIVDVDQRTDHRPPQNTTPFQDVWSALRADPLFTNDITPALAPRDEHETPMADIEPNESDANVDKDINKLEQDLPKSKQRPTRMLPPLRNASTARPRDDNPDGAFPSQVQLAGILYERIDAIFRQRGKEKGVGSFSRVVFRIMTARSNMLEFQTSTRLRKCVGLFSPNEHVYIGNGVGDEFRAKPGSGVDLNGFGKDVCDRFGNFYAQLIADPSVLGVFIVDECHWGPTKHQAYDMYVNLTLPRSGSERQHWDSIRASLGELWKHRNPESGELVSSHQIDNLVIVLVSATPYNQLSCKSRVPVRHLVSTNGHSVLQSTVLQGGNIIAKDAHVVDWSESQTESKFRLMVVPVESDARSDFYSVRATQDSSSSAWVLCCEQISSPGKQAADAIAALPSVGGNVCLDFVAEPAGKGLFYLEIHGVTIVYLAVQEGDRLAICNAKEERTPFVLDRRVACDIVQIRCPKGKYVTCMRTTSPSFSLTERSDLGTDDLGTQFFVCASSPDAVYYRSVNYYVNSMRSSDPDNHLIRKDGVLQSIAGDKELMKKMGKAATDAKPGKAGASKNSSIPGEILLACDYAFSILRFGVIFGDICIGEDLLDLPELHLKELLKLEDENWWLDKARTMRDYVTAIEKEGLPLTVFVSGYAKVIGESKSDWAKFLCAHAITEITIATTKYDAVKEWEWQEIRKRLITAFDTDNTDDKATSKKEFRASRSQTDIIIEDLVINRLERDKEGRLERDKEGRRRWKGNMKIIRVTESTTENLMYNSIVVASRLTGFRKAFHVLRDSENNRLIQSFSSDKDQKYWLKELQNAECPKNCGCKSFVASYAEVKCTCGHLHTPISQYEDLHGLPCILVLIDKGRMGDTFPKSFNCMDIRTSYTGTPKLSTVVQELGRMCRYARFDENVPYAVVSEKLCKLFYDGLGTAVAVRQMLTSHDGYLLGSVRNKELPWRYLSEPSAEHFDTHESIEPHNGRILFQAGPQCGKTGTYNALLRRLKEETGGQYVEMPQMEVSDDCDGKMVLWNYPYWKDMLDAGQIPKVESKSKYDDLGDDLDFQLGGPNDAIERKNIKKLVEAINKRRHAQPTGNPAPSSGNVMKPFRTKEFRFELRPFHPSEGDDHIVNEAMTWVSVRGVAEVEVRVSMPKSNDFSNLFKKCDDGRVSLTNDHGRDVRHWIFQPSHPAGDRSAENRRLDLRQALEGKSYAHAIVVRSIETYKVWAPTHNLIELPKTMKSLDEMEDDDVVESGIGYARRFIQLLAETHGLKHVFLIDDNIPHMAELDFPLRHITRDNGTESRVFQSKPCSLWAVVSQLQSQFSGESPEDRAFSLDDVRVARPDIQLQSEPNAIWQYAGNPSKYALLGTARFEHRAITEKPFKRTHVFSFALLNVEAVRASEINGASPLFPPWPFREDINFNQQCDNSRLWVCKYNRFIQLKQPTRFSPQSDHQPPSARDQRLSRPHREDSTVPAIEVSPQIHSDESDNVAAIDEPMPPLPEVPTPAPIVKNAMTFWREHWGGAEKVDWAVFWKAFVLEYPHFEGVEANIRQNWMDNGAVHSAKLHQAEWETWPINVLLVSRGQHTAQAIERLAEAGGLRVVLAAMQSARNSRTLSIVALAAYAAVHNETRKRKVGQSLDLSSVDVVVAAMKLCPTNLEVQARGCDTFAKLIHNENSASEVSGEVIELVLNAMRLQPDGAMYNNSDDERFLQLAGCKALANLAVTPDNRVTIARVGGIELLLSAVGNYATWENMQAVGWDALGSLALTSDNRAKIGREDIKLLLSAMRKFAKSKGLQAIGCHALANLASDDANSAAIAEPQIAGIEAIVAAMEAHASVADVQQNGCVALRNLAVNDNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACSALWTLAANDNNMETIADGGGIAAIVAAMEAHVSVAELQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMEAHVSVADLQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMKAHLSNAGVQEVACGALRNLAVNYNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACGALWNLAVNDSNMKTIAGMGGIAAIVVAMKEHISNADAQENACGALWNLAVNDNNKETIADRGGKAAIKAAMKAHLSNASLQENATKCLLLIEDSRRQQ* #PROT g2595.t1.4.5b6be70a g2595 MASGQPAASAARPDLVSKPPPAAQRVPTGAEKGKDREDASNTLTLPPGAPNNNTDATDNDRNSKRRRQQTTSESRDDDDDDDDDNEAWDARRVERRQRQRQPARQPVRQPDATSALEATRQPKRRRTQSSTTDPANAVVHPPLARSARGLAASPFTMPHTDDLPKLTYLSRESLRKYTVPKITYKENLDGDGRDAYRPLYITRTERLPQGDRNQSPLMTYATILQVAPDTYQPGRPLAFWTYEMFRFLPVPAGTTPIERTWTKRDRSPRVVQDERDGLKWTALKTHEPKLEDWLAAARHARWDSDDMRERNDAVLWQAFTYLYECEQTYKNANGNKETSILYGIEVPPEDRTLTCQPRYETNPEAFRIHSRQGSVVSSKRGGSVVGGGGSTVGGTSGVGGGSTVGGTSGVGGRSTVGGISGVGGGSTVGGTSGVGGGSTVGGASGEMQRVFSGRFSADHDAGSDSLTSLRAESIESSSDNNSSSSFSPTSPLANAVRTRAKRKVCGDDGEASSASIEGQVNKKIRQHQQPRRLQRVINSDDDGSDPRSFSNHHSRAGPINDGCIMTETQQRRVSPDNEAERQCIKRRRETLTGSSSSSPLNEVGNVIVDVDQRTDHRPPQNTTPFQDVWSALRADPLFTNDITPALAPRDEHETPMADIEPNESDANVDKDINKLEQDLPKSKQRPTRMLPPLRNASTARPRDDNPDGAFPSQVQLAGILYERIDAIFRQRGKEKGVGSFSRVVFRIMTARSNMLEFQTSTRLRKCVGLFSPNEHVYIGNGVGDEFRAKPGSGVDLNGFGKDVCDRFGNFYAQLIADPSVLGVFIVDECHWGPTKHQAYDMYVNLTLPRSGSERQHWDSIRASLGELWKHRNPESGELVSSHQIDNLVIVLVSATPYNQLSCKSRVPVRHLVSTNGHSVLQSTVLQGGNIIAKDAHVVDWSESQTESKFRLMVVPVESDARSDFYSVRATQDSSSSAWVLCCEQISSPGKQAADAIAALPSVGGNVCLDFVAEPAGKGLFYLEIHGVTIVYLAVQEGDRLAICNAKEERTPFVLDRRVACDIVQIRCPKGKYVTCMRTTSPSFSLTERSDLGTDDLGTQFFVCASSPDAVYYRSVNYYVNSMRSSDPDNHLIRKDGVLQSIAGDKELMKKMGKAATDAKPGKAGASKNSSIPGEILLACDYAFSILRFGVIFGDICIGEDLLDLPELHLKELLKLEDENWWLDKARTMRDYVTAIEKEGLPLTVFVSGYAKVIGESKSDWAKFLCAHAITEITIATTKYDAVKEWEWQEIRKRLITAFDTDNTDDKATSKKEFRASRSQTDIIIEDLVINRLERDKEGRLERDKEGRRRWKGNMKIIRVTESTTENLMYNSIVVASRLTGFRKAFHVLRDSENNRLIQSFSSDKDQKYWLKELQNAECPKNCGCKSFVASYAEVKCTCGHLHTPISQYEDLHGLPCILVLIDKGRMGDTFPKSFNCMDIRTSYTGTPKLSTVVQELGRMCRYARFDENVPYAVVSEKLCKLFYDGLGTAVAVRQMLTSHDGYLLGSVRNKELPWRYLSEPSAEHFDTHESIEPHNGRILFQAGPQCGKTGTYNALLRRLKEETGGQYVEMPQMEVSDDCDGKMVLWNYPYWKDMLDAGQIPKVESKSKYDDLGDDLDFQLGGPNDAIERKNIKKLVEAINKRRHAQPTGNPAPSSGNVMKPFRTKEFRFELRPFHPSEGDDHIVNEAMTWVSVRGVAEVEVRVSMPKSNDFSNLFKKCDDGRVSLTNDHGRDVRHWIFQPSHPAGDRSAENRRLDLRQALEGKSYAHAIVVRSIETYKVWAPTHNLIELPKTMKSLDEMEDDDVVESGIGYARRFIQLLAETHGLKHVFLIDDNIPHMAELDFPLRHITRDNGTESRVFQSKPCSLWAVVSQLQSQFSGESPEDRAFSLDDVRVARPDIQLQSEPNAIWQYAGNPSKYALLGTARFEHRAITEKPFKRTHVFSFALLNVEAVRASEINGASPLFPPWPFREDINFNQQCDNSRLWVCKYNRFIQLKQPTRFSPQSDHQPPSARDQRLSRPHREDSTVPAIEVSPQIHSDESDNVAAIDEPMPPLPEVPTPAPIVKNAMTFWREHWGGAEKVDWAVFWKAFVLEYPHFEGVEANIRQNWMDNGAVHSAKLHQAEWETWPINVLLVSRGQHTAQAIERLAEAGGLRVVLAAMQSARNSRTLSIVALAAYAAVHNETRKRKVGQSLDLSSVDVVVAAMKLCPTNLEVQARGCDTFAKLIHNENSASEVSGEVIELVLNAMRLQPDGAMYNNSDDERFLQLAGCKALANLAVTPDNRVTIARVGGIELLLSAVGNYATWENMQAVGWDALGSLALTSDNRAKIGREDIKLLLSAMRKFAKSKGLQAIGCHALANLASDDANSAAIAEPQIAGIEAIVAAMEAHASVADVQQNGCVALRNLAVNDNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACSALWTLAANDNNMETIADGGGIAAIVAAMEAHVSVADVQTYACSALWTLAANDSNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDNNMITIANGGGIAAIVAAMKAHLSNAGVQEVACSALWNLAVNDSNMKTIADRGGIAAIVAAMEAHVSVADVQQNACGALRNLAVNDKNKETIAGMGGIAAIVAAMEAHVSVADLPTYACSALCTLAVNDDNKETIAGMGGIAAIVAAMEAHVSVAELQTYACSALYTLAVNDDNKETIADRGGIAAIVAAMKAHLSNAGVQEVACGALRNLAVNYNNMKTIADSGGIAAIVAAMNKHVSVADVQTYACGALWNLAVNDSNMKTIAGMGGIAAIVVAMKEHISNADAQENACGALWNLAVNDNNKETIADRGGKAAIKAAMKAHLSNASLQENATKCLLLIEDSRRQQ* # ORIGINAL: g2594.t1 original gene structure, not modified by PASA NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS gene 38 999 . + . ID=g2594;Name=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS mRNA 38 999 . + . ID=g2594.t1;Parent=g2594;Name=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS exon 38 223 . + . ID=g2594.t1.exon1;Parent=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS CDS 38 223 . + 1 ID=cds.g2594.t1;Parent=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS exon 404 537 . + . ID=g2594.t1.exon2;Parent=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS CDS 404 537 . + 1 ID=cds.g2594.t1;Parent=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS exon 626 999 . + . ID=g2594.t1.exon3;Parent=g2594.t1 NODE_1006_length_14829_cov_23.921_potentialcontaminant AUGUSTUS CDS 626 999 . + 2 ID=cds.g2594.t1;Parent=g2594.t1 #PROT g2594.t1 g2594 DLAARNCMVVAGLRAPNTIENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLVYAAMEACWRKHPETRPQFSQLVLQLRRGMAVLCGTEGGGGVGGGGNLDADNVSDSVAALGQLKPFAITVPEDAYAETVGEEESLYTLQNPIFRKDSNSLTGHSSA* # ORIGINAL: g2754.t1 original gene structure, not modified by PASA NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS gene 2 1732 . + . ID=g2754;Name=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS mRNA 2 1732 . + . ID=g2754.t1;Parent=g2754;Name=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS exon 2 380 . + . ID=g2754.t1.exon1;Parent=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS CDS 2 380 . + 1 ID=cds.g2754.t1;Parent=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS exon 613 1327 . + . ID=g2754.t1.exon2;Parent=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS CDS 613 1327 . + 0 ID=cds.g2754.t1;Parent=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS exon 1488 1732 . + . ID=g2754.t1.exon3;Parent=g2754.t1 NODE_4345_length_1775_cov_91.8535_potentialcontaminant AUGUSTUS CDS 1488 1732 . + 2 ID=cds.g2754.t1;Parent=g2754.t1 #PROT g2754.t1 g2754 TDIPHWRVFRGTSELESFHHFINSQDLGDCEVSLAHAIYIGGAHLWSHRCRINVGGRRLLMHLVDPTRMNRISFLLGRVNTVFDRATHAISADHVFLEPLLCNDVAMAMGTPAQAEVLRATTQGTAQVGASSSTAHCLTARPLTPSGVNLIVEMILSGLFLTTAAAKEAFERANESNNFVPFWALLESAGASEGKCLQTRELVNAYNFTVYEALSWLAEQSRGCTAAPIDTNVAPNRDEESGPIVAHEGNNDAPVPPSLQVWIRPQSRRDIKVEDLHVTSYAHVKDMIHTYIWRVAVRQSGPTRTRLRDHLQPAPSDLSITTFPGRQMSHGGEDISAEDCNIQFAAPLMIPRSNPSDVNQNHGKGSRKRHRHADKKQSATVGRGSGQMLLPKMQLQDLPQMASKAGKRKQFPALSATNCSIACPSIAPSSCGTSREIIAAMCPFA* # ORIGINAL: g8523.t1 original gene structure, not modified by PASA NODE_1793_length_9225_cov_42.2133 AUGUSTUS gene 2 717 . + . ID=g8523;Name=g8523.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS mRNA 2 717 . + . ID=g8523.t1;Parent=g8523;Name=g8523.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 2 95 . + . ID=g8523.t1.exon1;Parent=g8523.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 2 95 . + 2 ID=cds.g8523.t1;Parent=g8523.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 381 717 . + . ID=g8523.t1.exon2;Parent=g8523.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 381 717 . + 1 ID=cds.g8523.t1;Parent=g8523.t1 #PROT g8523.t1 g8523 TDNLLLSEQQGTYAETAPESHYVEQEEGPQEIDDINPELTETFNAIPKSVLDDAVVVDDTLTLAREEILVDDVARARTVIFESTAHESDLERGGLEPVFHVPTNIITVMSADRHHPRSFEYLTKLLPNPNVHNRLHKYAHKP* # ORIGINAL: g8524.t1 original gene structure, not modified by PASA NODE_1793_length_9225_cov_42.2133 AUGUSTUS gene 1675 3337 . + . ID=g8524;Name=g8524.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS mRNA 1675 3337 . + . ID=g8524.t1;Parent=g8524;Name=g8524.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 1675 2656 . + . ID=g8524.t1.exon1;Parent=g8524.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 1675 2656 . + 0 ID=cds.g8524.t1;Parent=g8524.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 2793 3337 . + . ID=g8524.t1.exon2;Parent=g8524.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 2793 3337 . + 2 ID=cds.g8524.t1;Parent=g8524.t1 #PROT g8524.t1 g8524 MSVTRSQGARQLQSFLVEKGSVATTPIDIDTEASIHDLVTGSKPLSSEADTKLLARKVVAALAAKTRGKWTLLSEEGVSFKGGTPKPDTFMMESTFAASGTKTESDHAWARTVGVLEWKGPKIAANAGQPSRYIEAMLAACPWRESAVVVMFSLSKVQVYVGYRWRHGRHRLRIEMFESCDVCSMAPVILAEEGKNKTMFRITGVETDGLSMLAWGLSAMSVASLPSDITKALRVPHPLYADTLAVHARLLGVGTSATVCEVHGAGGVPYCLKTVRVPYRAQFKSELDALQVLQSVPRASFPAIIVSDSKTRRLLTTPVANPFCPTAAWYQEGNLMKVLIIDFGCAVVIRNMNLASDDDIAEVSAKSDTYVPYSGSMWYASTSALEQLIEGDDDDNDGDIRAKSHNGWMRTVNVNASFDLEGLVKSIAALEVPRVADFINDESNRIYKMRHMSWTGFTPQDVLDVWNSVLKLPFIEAMVPAFEAARQGNHDRVATELRKLRIELIRSY* # ORIGINAL: g8525.t1 original gene structure, not modified by PASA NODE_1793_length_9225_cov_42.2133 AUGUSTUS gene 8102 9100 . + . ID=g8525;Name=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS mRNA 8102 9100 . + . ID=g8525.t1;Parent=g8525;Name=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 8102 8259 . + . ID=g8525.t1.exon1;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 8102 8259 . + 0 ID=cds.g8525.t1;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 8652 8709 . + . ID=g8525.t1.exon2;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 8652 8709 . + 1 ID=cds.g8525.t1;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 8820 8962 . + . ID=g8525.t1.exon3;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 8820 8962 . + 0 ID=cds.g8525.t1;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS exon 9094 9100 . + . ID=g8525.t1.exon4;Parent=g8525.t1 NODE_1793_length_9225_cov_42.2133 AUGUSTUS CDS 9094 9100 . + 1 ID=cds.g8525.t1;Parent=g8525.t1 #PROT g8525.t1 g8525 MMDQSAPASKVELSIKCRNLVNMDTFSKSDPLCVLFINRNGAWQESGRTEVIDDNLDPEFTKTFVVDYHFETKQDLKFAVFDVDDATGFNLSQQDFIGEAFFTLGDIVAAAGQTQEKDLRC* # PASA_UPDATE: g8947.t1, single gene model update, valid-1, status:[pasa:asmbl_10201,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 2108 2969 . + . ID=g8947;Name=g8947.t1 NODE_979_length_15153_cov_53.5517 . mRNA 2108 2969 . + . ID=g8947.t1;Parent=g8947;Name=g8947.t1 NODE_979_length_15153_cov_53.5517 . five_prime_UTR 2108 2161 . + . ID=g8947.t1.utr5p1;Parent=g8947.t1 NODE_979_length_15153_cov_53.5517 . exon 2108 2387 . + . ID=g8947.t1.exon1;Parent=g8947.t1 NODE_979_length_15153_cov_53.5517 . CDS 2162 2387 . + 0 ID=cds.g8947.t1;Parent=g8947.t1 NODE_979_length_15153_cov_53.5517 . exon 2500 2969 . + . ID=g8947.t1.exon2;Parent=g8947.t1 NODE_979_length_15153_cov_53.5517 . CDS 2500 2888 . + 2 ID=cds.g8947.t1;Parent=g8947.t1 NODE_979_length_15153_cov_53.5517 . three_prime_UTR 2889 2969 . + . ID=g8947.t1.utr3p1;Parent=g8947.t1 #PROT g8947.t1 g8947 MSKPTLTYFNGRGLGELPRLLLAEAGVEYNDVRIEDATELKKSGKLPFGQVPIFEVDGVVIPQSIAIARYIARKNNLYGANELEGAQIDAIIDGFADLRAKYYAIRGAPEDKKEAEKAKFANEVAPVWLGYQEALLAKNDGGKHWFVGSNVSLADIVAYNSVFVYLSEFPHIVDNFPLLKGLKERVESRPKIAEWIAKRPQSQW* # PASA_UPDATE: g8952.t1, single gene model update, valid-1, status:[pasa:asmbl_10205,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 14144 14813 . - . ID=g8952;Name=g8952.t1 NODE_979_length_15153_cov_53.5517 . mRNA 14144 14813 . - . ID=g8952.t1;Parent=g8952;Name=g8952.t1 NODE_979_length_15153_cov_53.5517 . exon 14144 14813 . - . ID=g8952.t1.exon1;Parent=g8952.t1 NODE_979_length_15153_cov_53.5517 . CDS 14388 14813 . - 0 ID=cds.g8952.t1;Parent=g8952.t1 NODE_979_length_15153_cov_53.5517 . three_prime_UTR 14144 14387 . - . ID=g8952.t1.utr3p1;Parent=g8952.t1 #PROT g8952.t1 g8952 MQSSVSGSVRGSGMSVGSDRSMREREREGSAPAAHEAHAVHSHSFDASVPHSNSDMAHTHDACMHGHVGPRKMSDALEEFDAASKTWSWPLKFGLCLRGTYDHILYSPDTLTAVTCCVLKEYEHMSDHIPVLADLRVRSTY* # PASA_UPDATE: g8951.t1, single gene model update, valid-1, status:[pasa:asmbl_10202,status:12],[pasa:asmbl_10204,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 8970 12821 . + . ID=g8951;Name=g8951.t1 NODE_979_length_15153_cov_53.5517 . mRNA 8970 12821 . + . ID=g8951.t1;Parent=g8951;Name=g8951.t1 NODE_979_length_15153_cov_53.5517 . exon 8970 9050 . + . ID=g8951.t1.exon1;Parent=g8951.t1 NODE_979_length_15153_cov_53.5517 . CDS 8970 9050 . + 0 ID=cds.g8951.t1;Parent=g8951.t1 NODE_979_length_15153_cov_53.5517 . exon 9222 12821 . + . ID=g8951.t1.exon2;Parent=g8951.t1 NODE_979_length_15153_cov_53.5517 . CDS 9222 12677 . + 0 ID=cds.g8951.t1;Parent=g8951.t1 NODE_979_length_15153_cov_53.5517 . three_prime_UTR 12678 12821 . + . ID=g8951.t1.utr3p1;Parent=g8951.t1 #PROT g8951.t1 g8951 MHTFDICTKSRVEGQRERARLIWRYRSAHSQAMACNQKKTGIALIVVGLLLVIVGLVVGLLLPQVVQTTINDGVVCPQSMTADCFDRWQTNDESIRPITGSEHDPTRQYNDVYMFNITNKAAAMAGGPMELSQVGPYRYRLVYQYYNVLWDYALDTITYKEYRQMIPDDSSDPNGPLITQLSPSALRATYLGLTTFLNALILPQVAANPLSKCYKLTDVSTPPTTVEWDQQYQAKLFCRKEMATKYYQSTLSDPSVKGALGVYGGDFFVSLSNFLPPIIQGLIDSLGPQLMATAKALFVANVPTLVVGGFVTLINNSNTINGLVFVNEIVPLYTADMAELQKGNASVGGRIESMKSGCGSNPAAFDPSQAACAAAIAATYMGAGMAPMTSACRRAVTLPSQYMPCGLPGFSASNDLQSNQQCCLNQMRTSPSLVAAVRDAGLNVLVNDPRLGSPSTATKNKIVDVAKKRLFNTTSGAHDTLLPYNFAPMSANASSFFESNAFDLRPSSPAVCCAPGTGSFIATYDLSTEYAGDDAGRDFATTVYLSFLVEAFRAVFPSGLISAVAAEQGAGVAITWSSLLDAPANSFRIPRLFAYQLGTGSLTESTTYAESMNATNTSINNATYNIGFLANPTVQFLLSIGRNPARPSGITYLPFPSNFNKFEIGLRYPTSLQFDKNAEGLAKIYSIYKVLLSGAAALVLPEVGRYLPTLLVNGSTPTAATARVIAVWAAKSGYTVDVTEAPAFFAMVHKYLYEDLTPILRDWLHAGPGREFGLYMTRPISDWARGLKSDIYEGAIGQPGWCQPGFLTHHTGKNINGTHDRLNKGVQGGCISPAEGGDDATPNSKPNTNEYSYYTGKADITKVSQYAGIGKSTRTGRLQNGTGDAMWQYVNNWYYPALAGDASAQSLLKIVGHSGTQFIPAKKTFVLHGYTSPRVGEYEVFVTQADRHLNLVYTGNIKFKGITLNLFVADKDILKKDHRLNPQFFESVSIDGVSQIVDGIQTTEDSRGFPSWISRPYFVHGDSRLLAPFPALVAKLAADGNDAYDTMLGVEPITGASMYARKRLQGNIGVLPGMFSAYNVYNGRVNDSLVRRPIPYYWVNEWAEIPDPKVSAFKTKVYTTSTAAYGVLIALPTAGLLIIILGIYLLLTARRPTKATESSASFAKSGVGAEVANPLYSK* # PASA_UPDATE: g8949.t1, single gene model update, valid-1, status:[pasa:asmbl_10207,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 5441 6412 . - . ID=g8949;Name=g8949.t1 NODE_979_length_15153_cov_53.5517 . mRNA 5441 6412 . - . ID=g8949.t1;Parent=g8949;Name=g8949.t1 NODE_979_length_15153_cov_53.5517 . five_prime_UTR 6042 6412 . - . ID=g8949.t1.utr5p1;Parent=g8949.t1 NODE_979_length_15153_cov_53.5517 . exon 5778 6412 . - . ID=g8949.t1.exon1;Parent=g8949.t1 NODE_979_length_15153_cov_53.5517 . CDS 5778 6041 . - 0 ID=cds.g8949.t1;Parent=g8949.t1 NODE_979_length_15153_cov_53.5517 . exon 5441 5695 . - . ID=g8949.t1.exon2;Parent=g8949.t1 NODE_979_length_15153_cov_53.5517 . CDS 5459 5695 . - 0 ID=cds.g8949.t1;Parent=g8949.t1 NODE_979_length_15153_cov_53.5517 . three_prime_UTR 5441 5458 . - . ID=g8949.t1.utr3p1;Parent=g8949.t1 #PROT g8949.t1 g8949 MLLLKLFIRDSRQTVSVPLRRLNASACHYAEPTTRKQPSNPVKKGNRNESLVKHDTHNRNESSVIKETQSTTTAATQKSDSREDNNSEGVDWGRVGRHYLAAFGLGAAGYVLYVSGKEGERKRKEGPAVVDMKAVEEDLERLRNSLRDKHRLPRKEMPEVVRPLPK* # ORIGINAL: g8948.t1 original gene structure, not modified by PASA NODE_979_length_15153_cov_53.5517 AUGUSTUS gene 3452 5217 . + . ID=g8948;Name=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS mRNA 3452 5217 . + . ID=g8948.t1;Parent=g8948;Name=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 3452 3460 . + . ID=g8948.t1.exon1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 3452 3460 . + 0 ID=cds.g8948.t1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 3556 3681 . + . ID=g8948.t1.exon2;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 3556 3681 . + 0 ID=cds.g8948.t1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 3907 4068 . + . ID=g8948.t1.exon3;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 3907 4068 . + 0 ID=cds.g8948.t1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 4219 4345 . + . ID=g8948.t1.exon4;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 4219 4345 . + 0 ID=cds.g8948.t1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 4651 4753 . + . ID=g8948.t1.exon5;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 4651 4753 . + 2 ID=cds.g8948.t1;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS exon 5094 5217 . + . ID=g8948.t1.exon6;Parent=g8948.t1 NODE_979_length_15153_cov_53.5517 AUGUSTUS CDS 5094 5217 . + 1 ID=cds.g8948.t1;Parent=g8948.t1 #PROT g8948.t1 g8948 MAEAPAILYSYFRSSCSWRVRMALRFKGIEYEYRAVNLIKDGGEQLKEEYLRLNPSALVPALHINGHTLGQSVAIMEYLDEVHPEKPLLPVGDAYKRALVRRIVDSIACDIQPIQNLRVLNHVGDEKKVAWAQHWIVTGFNGLEKLLKDTAGNFCVGDEITMADLCLAPQVYNARRFKVDLEPYPTILRVDKAFTETDLYRATEPSACPDCPPDLK* # PASA_UPDATE: g8946.t1, single gene model update, valid-1, status:[pasa:asmbl_10206,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 29 1394 . - . ID=g8946;Name=g8946.t1 NODE_979_length_15153_cov_53.5517 . mRNA 29 1394 . - . ID=g8946.t1;Parent=g8946;Name=g8946.t1 NODE_979_length_15153_cov_53.5517 . five_prime_UTR 1334 1394 . - . ID=g8946.t1.utr5p1;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . exon 1274 1394 . - . ID=g8946.t1.exon1;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . CDS 1274 1333 . - 0 ID=cds.g8946.t1;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . exon 1049 1132 . - . ID=g8946.t1.exon2;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . CDS 1049 1132 . - 0 ID=cds.g8946.t1;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . exon 487 633 . - . ID=g8946.t1.exon3;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . CDS 487 633 . - 0 ID=cds.g8946.t1;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . exon 29 225 . - . ID=g8946.t1.exon4;Parent=g8946.t1 NODE_979_length_15153_cov_53.5517 . CDS 29 225 . - 0 ID=cds.g8946.t1;Parent=g8946.t1;3_prime_partial=true #PROT g8946.t1 g8946 MAEKVLVFGASGLVGKDIVKGLVASPKNIGVRVFGRDAVKLTETFGDAVETATGDLSNEKDIARAVAGVSRIFLLTVSSPVQPSIEGLIAAAAKTAGVKQIVKLSVYGAGKFHPTGSLFRWHGDAEDAVIRSGVSFVILRPNLFIQNTLRDDAAAAKIGKIF # PASA_UPDATE: g8950.t1, single gene model update, valid-1, status:[pasa:asmbl_10208,status:12], valid-1 NODE_979_length_15153_cov_53.5517 . gene 7314 8501 . - . ID=g8950;Name=g8950.t1 NODE_979_length_15153_cov_53.5517 . mRNA 7314 8501 . - . ID=g8950.t1;Parent=g8950;Name=g8950.t1 NODE_979_length_15153_cov_53.5517 . five_prime_UTR 8479 8501 . - . ID=g8950.t1.utr5p1;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . exon 8054 8501 . - . ID=g8950.t1.exon1;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . CDS 8054 8478 . - 0 ID=cds.g8950.t1;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . exon 7757 7877 . - . ID=g8950.t1.exon2;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . CDS 7757 7877 . - 1 ID=cds.g8950.t1;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . exon 7314 7655 . - . ID=g8950.t1.exon3;Parent=g8950.t1 NODE_979_length_15153_cov_53.5517 . CDS 7314 7655 . - 0 ID=cds.g8950.t1;Parent=g8950.t1 #PROT g8950.t1 g8950 MQSVIIHSDAAIRIVTEPFLVGDELLKLAIESSRDCIRFLAELDDPLGAVVRAASVLHSPASIDNVLGNDTVNGTSVSVLHILNGGRFYGMESAWAAEFPDAARASLVSLRAKRYLHETNGWQVRVWERSGAFPSDGVLLIGDTVATGATLAGVLDLIVHEAVTNGTSLPHIVIFTIAGAAEAKQRLQGVDALYWSHTGRHLLLTYANAEFHLNNNGTDLEFCSDPLDPSSQLLKSMHADARAYISEKLGPFARHMKCAVWDWVSVPPCMCDMFPNSLSIIYTKATNTGLATKCP* # PASA_UPDATE: g6068.t1, single gene model update, valid-1, status:[pasa:asmbl_5856,status:12], valid-1 NODE_3297_length_3802_cov_37.495 . gene 70 1001 . - . ID=g6068;Name=g6068.t1 NODE_3297_length_3802_cov_37.495 . mRNA 70 1001 . - . ID=g6068.t1;Parent=g6068;Name=g6068.t1 NODE_3297_length_3802_cov_37.495 . five_prime_UTR 731 1001 . - . ID=g6068.t1.utr5p1;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . exon 647 1001 . - . ID=g6068.t1.exon1;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . CDS 647 730 . - 0 ID=cds.g6068.t1;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . exon 384 458 . - . ID=g6068.t1.exon2;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . CDS 384 458 . - 0 ID=cds.g6068.t1;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . exon 70 194 . - . ID=g6068.t1.exon3;Parent=g6068.t1 NODE_3297_length_3802_cov_37.495 . CDS 70 194 . - 0 ID=cds.g6068.t1;Parent=g6068.t1;3_prime_partial=true #PROT g6068.t1 g6068 MASAEGSRSTKTDNAQSLDRILQNFFAKVAQIVVQARSTLQDAPKQPVKPNVWFNLEMEDSERVKEEVRAWRADPSLPMNIEVALDVSQIGTSK # ORIGINAL: g6069.t1 original gene structure, not modified by PASA NODE_3297_length_3802_cov_37.495 AUGUSTUS gene 3182 3690 . + . ID=g6069;Name=g6069.t1 NODE_3297_length_3802_cov_37.495 AUGUSTUS mRNA 3182 3690 . + . ID=g6069.t1;Parent=g6069;Name=g6069.t1 NODE_3297_length_3802_cov_37.495 AUGUSTUS exon 3182 3690 . + . ID=g6069.t1.exon1;Parent=g6069.t1 NODE_3297_length_3802_cov_37.495 AUGUSTUS CDS 3182 3690 . + 0 ID=cds.g6069.t1;Parent=g6069.t1 #PROT g6069.t1 g6069 MSGAAPHGGTASLHRSHSHSHSGGPRVSFSSEDIAIPDSQPAAASTPIRSRERGDRGDREPAKHVVHVRSSSSSESTQHTASLQQTQRTLGRSSSESDTAGRVNAHHGGDALLSGSHADRIVGMIVRQLGGVQNDATLESEREYLRNIHASTPPELWARLEETARAELK # ORIGINAL: g11786.t1 original gene structure, not modified by PASA NODE_4237_length_1958_cov_40.2958 AUGUSTUS gene 182 1247 . + . ID=g11786;Name=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS mRNA 182 1247 . + . ID=g11786.t1;Parent=g11786;Name=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS exon 182 293 . + . ID=g11786.t1.exon1;Parent=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS CDS 182 293 . + 0 ID=cds.g11786.t1;Parent=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS exon 686 812 . + . ID=g11786.t1.exon2;Parent=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS CDS 686 812 . + 2 ID=cds.g11786.t1;Parent=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS exon 953 1247 . + . ID=g11786.t1.exon3;Parent=g11786.t1 NODE_4237_length_1958_cov_40.2958 AUGUSTUS CDS 953 1247 . + 1 ID=cds.g11786.t1;Parent=g11786.t1 #PROT g11786.t1 g11786 PSEVQLSRMLRDCNVTECLASFVADNELWIVMPLMDGGSLAGMLLTREFADGFPETVVAVCIRDVLRALSYLHKNGIIFRNVRPSRMLAHSDGGVRLSNLCNSTTLYREGHRARREFVFGSDLSGSIPWVAPEVLQQDLYGYDTSADIYGLGISAIQLATGRLPYGGMEPTQVRDPG* # ORIGINAL: g7259.t1 original gene structure, not modified by PASA NODE_4042_length_2290_cov_78.8808 AUGUSTUS gene 70 2227 . - . ID=g7259;Name=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS mRNA 70 2227 . - . ID=g7259.t1;Parent=g7259;Name=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 2205 2227 . - . ID=g7259.t1.exon1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 2205 2227 . - 0 ID=cds.g7259.t1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 1651 1858 . - . ID=g7259.t1.exon2;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 1651 1858 . - 1 ID=cds.g7259.t1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 1234 1334 . - . ID=g7259.t1.exon3;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 1234 1334 . - 0 ID=cds.g7259.t1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 746 817 . - . ID=g7259.t1.exon4;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 746 817 . - 1 ID=cds.g7259.t1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 516 574 . - . ID=g7259.t1.exon5;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 516 574 . - 1 ID=cds.g7259.t1;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS exon 70 137 . - . ID=g7259.t1.exon6;Parent=g7259.t1 NODE_4042_length_2290_cov_78.8808 AUGUSTUS CDS 70 137 . - 2 ID=cds.g7259.t1;Parent=g7259.t1 #PROT g7259.t1 g7259 MEAKLMAELNHPNIVRILGIVTIGKPVLIVLEFMSNGSLLSYLVAKKDDLSRKSLMHMCRDIAAGMVEFERRGLVHRDLAARNILVANDGTCKIADFGLARHVESDYYISTSSQKIPVKWTAPESIKFRKFSSHSDVWAFGVVCWEIFALGDKPYGQMTNAEALEMLDKGQRLARPE # ORIGINAL: g13583.t1 original gene structure, not modified by PASA NODE_875_length_16423_cov_60.7853 AUGUSTUS gene 10573 11310 . + . ID=g13583;Name=g13583.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS mRNA 10573 11310 . + . ID=g13583.t1;Parent=g13583;Name=g13583.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 10573 11310 . + . ID=g13583.t1.exon1;Parent=g13583.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 10573 11310 . + 0 ID=cds.g13583.t1;Parent=g13583.t1 #PROT g13583.t1 g13583 MNGVVLMKGEEKAEAGSGRLAMNDLERKCAGMPIQTFGDLDFMICYGSAASNVQFHILRRNNSVSRLTDSTESLSLWNVADRLVIFNIVRNAIRLFPLMYARLPDVAIPMYGHVKNWNREVQFCNGIATKRFDDDLPLLKRVYKLCDGTHVGLPTCCSAPILDKAGRYRVQISPIVYQKVPLTVEEAVQFLSDVISGLVVLHGHGIVHRDLRFENIMYDPVSQHWFLIDFETCAATALLLVTRAH* # ORIGINAL: g13581.t1 original gene structure, not modified by PASA NODE_875_length_16423_cov_60.7853 AUGUSTUS gene 7143 8400 . + . ID=g13581;Name=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS mRNA 7143 8400 . + . ID=g13581.t1;Parent=g13581;Name=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 7143 7487 . + . ID=g13581.t1.exon1;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 7143 7487 . + 0 ID=cds.g13581.t1;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 7610 7781 . + . ID=g13581.t1.exon2;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 7610 7781 . + 0 ID=cds.g13581.t1;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 7944 8105 . + . ID=g13581.t1.exon3;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 7944 8105 . + 2 ID=cds.g13581.t1;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 8267 8400 . + . ID=g13581.t1.exon4;Parent=g13581.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 8267 8400 . + 2 ID=cds.g13581.t1;Parent=g13581.t1 #PROT g13581.t1 g13581 MAHKRKRTDDPSDGGCTPGTVRGCVPPVTGTPSFRLATAPAAAWNAALVSYEEAVRAVAARRDSGAGARATLPVSESLEALDAWATCALPSAIAARHEPHITVDELARIVRWKLKRGKFRPRLQQLAESNDPRTVVQCTATAFALAVSDDDPCVAARCLTAVLQGVGPATATALLAAACPARFAFMADEAMESSIGSADYTMKHLSIFTAWAREKAEKLNKEKDHSDQTLVIAAWTPEAVSRALWAHHILAAPIIPTKRTRTAVTCNNTV* # PASA_UPDATE: g13582.t1, single gene model update, valid-1, status:[pasa:asmbl_9794,status:3], valid-1 NODE_875_length_16423_cov_60.7853 . gene 8189 9866 . - . ID=g13582;Name=g13582.t1 NODE_875_length_16423_cov_60.7853 . mRNA 8189 9866 . - . ID=g13582.t1;Parent=g13582;Name=g13582.t1 NODE_875_length_16423_cov_60.7853 . five_prime_UTR 9828 9866 . - . ID=g13582.t1.utr5p1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 9694 9866 . - . ID=g13582.t1.exon1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 9694 9827 . - 0 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 9456 9529 . - . ID=g13582.t1.exon2;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 9456 9529 . - 1 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 9339 9370 . - . ID=g13582.t1.exon3;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 9339 9370 . - 2 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 9131 9191 . - . ID=g13582.t1.exon4;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 9131 9191 . - 0 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 8771 8952 . - . ID=g13582.t1.exon5;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 8771 8952 . - 2 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . exon 8189 8632 . - . ID=g13582.t1.exon6;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . CDS 8429 8632 . - 0 ID=cds.g13582.t1;Parent=g13582.t1 NODE_875_length_16423_cov_60.7853 . three_prime_UTR 8189 8428 . - . ID=g13582.t1.utr3p1;Parent=g13582.t1 #PROT g13582.t1 g13582 MGIFGTCSCCVGPSLLASDMSRLADEASRVVNSGADYLHLDVMDGHFVPNITMGPPVIKSLRKHTKAVFDCHMMVSHPEQWVKDMADAGCNIFTFHLETTVDPVALIAMIRAAGMRAGVAIKPKTPVESVYPLVELVDMVLVMTVEPGFGGQEFMADMMPKVSALRARHPTMDIEVDGGLGPATIDAAAAAGANFIVAGSSVFKSDDPRATMDHMRGRVRTLSTFGST* # PASA_UPDATE: g13580.t1, single gene model update, valid-1, status:[pasa:asmbl_9793,status:12], valid-1 NODE_875_length_16423_cov_60.7853 . gene 1973 6702 . - . ID=g13580;Name=g13580.t1 NODE_875_length_16423_cov_60.7853 . mRNA 1973 6702 . - . ID=g13580.t1;Parent=g13580;Name=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 6674 6702 . - . ID=g13580.t1.exon1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 6674 6702 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 6511 6559 . - . ID=g13580.t1.exon2;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 6511 6559 . - 1 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 6196 6303 . - . ID=g13580.t1.exon3;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 6196 6303 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 5906 5995 . - . ID=g13580.t1.exon4;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 5906 5995 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 5059 5181 . - . ID=g13580.t1.exon5;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 5059 5181 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 4830 4910 . - . ID=g13580.t1.exon6;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 4830 4910 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 4259 4354 . - . ID=g13580.t1.exon7;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 4259 4354 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 2597 4069 . - . ID=g13580.t1.exon8;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 2597 4069 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 2240 2368 . - . ID=g13580.t1.exon9;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 2240 2368 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . exon 1973 2099 . - . ID=g13580.t1.exon10;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . CDS 2004 2099 . - 0 ID=cds.g13580.t1;Parent=g13580.t1 NODE_875_length_16423_cov_60.7853 . three_prime_UTR 1973 2003 . - . ID=g13580.t1.utr3p1;Parent=g13580.t1 #PROT g13580.t1 g13580 MLESSSPPRRHHPYARATRIGRGGDIGGDGGTDSGGAVMSKMRTAFDELLQSPHSAPIMHSTAHRESETVVMRARIVELESQADSLRLTIEQAREAEFQERTALLSALCDGRVRALEQERAQLAAELADMRCGNRAQTSDAEAALHRAHVKNSILHTEMQALRSELVICKRYADDAAVQLRSMTQLQIELQNSQQRAAELEQRLRRSEERVGLSRVEDGVRERLAALEREHRSAVHEVRYLRETAANAEILREEVDDYKARVARADERVREMSSRLGAAGTGSSDARGDYRGAPDELASLRMEHALLLEAHGRSREDCARAAAVTETLRSRLEASASEVFRAVEDRRLAEETAQRLQEQLKRVGAKVTFLTRERDGIRRILDSYAEEGTGAASESVINDRIAHAESALKDYTEQLEAAEKAGDELRKRLESATVQLAATRAELAASQWTVAELRGAHESLTAEASRAWAAVEALRREGAQAQTARDDELVSTRMTLGALERRAAEASALADELRGDLDARSSECDALRARLVALQALADDQHGQLSRAAGMPSGHMQVGRDAEDGRLREELAVLRAERDALEARVGKGDFNPDTTRVLHMRESPALHALRADHARLNARVAELEEALRSQSTNGPPTAQAMDELVGLREALAAAEVRQDRLKTVFRRKIQEFREACYELTGYKIDMREDQYVLLSMYAEKQGDALLFRGSPAGMQLLETEFSAGQQTLIDMYLRRFNSIPAFLSEITLQLFSKQTRT* # ORIGINAL: g13579.t1 original gene structure, not modified by PASA NODE_875_length_16423_cov_60.7853 AUGUSTUS gene 124 1782 . + . ID=g13579;Name=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS mRNA 124 1782 . + . ID=g13579.t1;Parent=g13579;Name=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 124 316 . + . ID=g13579.t1.exon1;Parent=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 124 316 . + 0 ID=cds.g13579.t1;Parent=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 555 715 . + . ID=g13579.t1.exon2;Parent=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 555 715 . + 2 ID=cds.g13579.t1;Parent=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS exon 877 1782 . + . ID=g13579.t1.exon3;Parent=g13579.t1 NODE_875_length_16423_cov_60.7853 AUGUSTUS CDS 877 1782 . + 0 ID=cds.g13579.t1;Parent=g13579.t1 #PROT g13579.t1 g13579 MAGRAVDSGNVGGRRSTTGIDYSRWDAIDVSSSDDDAPKQSPRASAGDGAQKSRLVTIIGCPLGERVRWALDKHGIPFVDERHPPGIQAVAAIAVLSLSTAASTAEPTSVVLLTSKGEIIRTATKVFLWIFSQSWNSPHRIYGPKTAIEMERYFDAELFPHATALWWHIGLSSTSAAQTMLLNDTLPRVLQAALVVAWPAVAVVMRALRARQGQPRMDDAAAGRIEAVFARVSDMLRDGRKYICGDQISSPDYAFGSLASVCMLLSDDLADGEPACRMTLKMPPPRSPVVPTDAAALAVRLRATPAGRFALRLCRHDRPRQHNLPRISHPLPRNVVIGLRVAAIFFVCVAFVVAFLWPIASILCACALAAAAWHLRLKHYWRPFGPLTRRVWAYARGRRPPSPDVPADGANSGRAEEAS* # ORIGINAL: g3646.t1 original gene structure, not modified by PASA NODE_146_length_35037_cov_54.4821 AUGUSTUS gene 16739 18098 . + . ID=g3646;Name=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS mRNA 16739 18098 . + . ID=g3646.t1;Parent=g3646;Name=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 16739 16767 . + . ID=g3646.t1.exon1;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 16739 16767 . + 0 ID=cds.g3646.t1;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 17234 17464 . + . ID=g3646.t1.exon2;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 17234 17464 . + 1 ID=cds.g3646.t1;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 17684 17851 . + . ID=g3646.t1.exon3;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 17684 17851 . + 1 ID=cds.g3646.t1;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 18035 18098 . + . ID=g3646.t1.exon4;Parent=g3646.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 18035 18098 . + 1 ID=cds.g3646.t1;Parent=g3646.t1 #PROT g3646.t1 g3646 MLENEESREKCERLVNDARGRLDNELALKRRAVARDRNLVFNGKMPSAGEDDPMKVQCLVDEDRHPDEYEKKLRIMICKAFADLEQRRRELDIREATLRKRKREQEIEEEEKRKKAADHKKDWEETRTQRVSSWRDFAAGKSKKSSGPLKPPSLRTEARTLPK* # PASA_UPDATE: g3649.t1, single gene model update, valid-1, status:[pasa:asmbl_1693,status:3], valid-1 NODE_146_length_35037_cov_54.4821 . gene 26187 30987 . - . ID=g3649;Name=g3649.t1 NODE_146_length_35037_cov_54.4821 . mRNA 26187 30987 . - . ID=g3649.t1;Parent=g3649;Name=g3649.t1 NODE_146_length_35037_cov_54.4821 . five_prime_UTR 30720 30987 . - . ID=g3649.t1.utr5p1;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . exon 28716 30987 . - . ID=g3649.t1.exon1;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . CDS 28716 30719 . - 0 ID=cds.g3649.t1;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . exon 28226 28471 . - . ID=g3649.t1.exon2;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . CDS 28226 28471 . - 0 ID=cds.g3649.t1;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . exon 26187 28049 . - . ID=g3649.t1.exon3;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . CDS 27315 28049 . - 0 ID=cds.g3649.t1;Parent=g3649.t1 NODE_146_length_35037_cov_54.4821 . three_prime_UTR 26187 27314 . - . ID=g3649.t1.utr3p1;Parent=g3649.t1 #PROT g3649.t1 g3649 MKKKSGSALPPKGKSRSLEDINVLREAAAIAAANKDSVGSQWLPVGFQPDRYKAYTDSLRTEVTVVQNVIDELTDKEKKWPFSRRKTAQDAVLWGRTGPSVSMDTVFGRHSIAANEQHAYLGKIALLQFAIDRIIHSAERLVYRAAKATRHKKSLGEMAAYAKAADGTYRMQPIAILGGLVTDMIKSAADSNAMMSQLEARALEAEGLAAQAHETVRILQEVLTKREEGKLGTNVSITIPPVAVGVSNLHTEGELDVNEPGRDVATQTQDMGQFCPMCFDIGKKIALIQRIAADMLTGNSKATDVRRPSLTDIRRTVDGEERPQSGTGFRTTDSDGDDRPTSGTGRRSSVKPDSDDRPTSGTGRRSSLKPDTNADERPPSAAGGRRASVKPVDTATPDDRQSVAVLEKSPNAARRVSIRPVSTDVDSSSAPGAVDDKKPDAGGRRVSIKPPPIPNALAVPGTMTADTVTSDSPTPPSRPVSRARSGSARHDPVPSVDDGVSWLALHARELEHVRDYIKARERDIEGLRADLAQSRDKGKRLELRVARLESDLQRAIEARDTVARSHAEETARLRQNNAEDLVLAEKRRQVAIAQERKCTDNAVAQLAAFKDLADSAVAKERAQIATLTAELKQLHSMIEHEGSRVVVLQDAVRERDALRIQMRTRDAELEEARAKVHSYTSRIAAIDATEAAWRTREQELMTSISNTTAELQKTQLARTTAALDADFCRKEAASSRQEMERMRARMDEEVRRSVSTEESRRNLEDQVAYLEETIERLRIQISAAGSAFPLVEEFDRVALERNLTSPAVSTVQRLVDTNTARIGQLEEKNERLQRMILDDAEGKSHRTMPKSTTPTPLWNASSLGALFGMSQPPMAWTPQPDETPRTSPLPREVGRRGNSAGADSPSTPGRKQRWEGASSVRTNNSATDVEKTTYTAIGRRTSYIPKLVSLTGHEDLGGHVTRVDSRTSPVLPSSGRVTSPGNRRNAPRLPAESG* # PASA_UPDATE: g3644.t1, single gene model update, valid-1, status:[pasa:asmbl_1694,status:12],[pasa:asmbl_1695,status:12], valid-1 NODE_146_length_35037_cov_54.4821 . gene 4092 14444 . + . ID=g3644;Name=g3644.t1 NODE_146_length_35037_cov_54.4821 . mRNA 4092 14444 . + . ID=g3644.t1;Parent=g3644;Name=g3644.t1 NODE_146_length_35037_cov_54.4821 . five_prime_UTR 4092 4112 . + . ID=g3644.t1.utr5p1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . five_prime_UTR 4198 4226 . + . ID=g3644.t1.utr5p2;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 4092 4112 . + . ID=g3644.t1.exon1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 4198 4302 . + . ID=g3644.t1.exon2;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 4227 4302 . + 0 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 4814 5016 . + . ID=g3644.t1.exon3;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 4814 5016 . + 2 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 5248 5815 . + . ID=g3644.t1.exon4;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 5248 5815 . + 0 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 6265 6751 . + . ID=g3644.t1.exon5;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 6265 6751 . + 2 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 6947 7116 . + . ID=g3644.t1.exon6;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 6947 7116 . + 1 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 7262 7391 . + . ID=g3644.t1.exon7;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 7262 7391 . + 2 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 7555 7754 . + . ID=g3644.t1.exon8;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 7555 7754 . + 1 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 8095 8105 . + . ID=g3644.t1.exon9;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 8095 8105 . + 2 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 8216 8295 . + . ID=g3644.t1.exon10;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 8216 8295 . + 0 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 8571 8709 . + . ID=g3644.t1.exon11;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 8571 8709 . + 1 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 9101 9228 . + . ID=g3644.t1.exon12;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 9101 9228 . + 0 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 9533 9698 . + . ID=g3644.t1.exon13;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 9533 9698 . + 1 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 9868 11543 . + . ID=g3644.t1.exon14;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 9868 11543 . + 0 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . exon 11701 14444 . + . ID=g3644.t1.exon15;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . CDS 11701 14311 . + 1 ID=cds.g3644.t1;Parent=g3644.t1 NODE_146_length_35037_cov_54.4821 . three_prime_UTR 14312 14444 . + . ID=g3644.t1.utr3p1;Parent=g3644.t1 #PROT g3644.t1 g3644 MAVPILAAPPRLSVILLFLLFFALYAVNIATALCDTTSFDVLTSSNGALVVSSGQKRVVRSDVVILGGVTVRAGGVLAFAPDSSSSMSTPHILVQGELHIGGDGCPVTGKATITLTGEPGGATMSSTMRDGTVQFFGGKGIGVAEGGVLEIHGSRGLGASWTRLQGTISAGASSLTLARAVDWRAGDRIIIASTDFNMLQAEPVTIASVTVIGGLTALSFTPPVKYMHYGEIFKGVDMRAEVGLLSRSVVVRGSAVGNFGGQINIQRGFSSVHIEGAELENMGQGSQIGRYPVHFHMVGRVPVGTYVRDNSIHHSNFRCVVLHATHGLLIQSNVAYDHAGHCFFMEDGVEVDNVFDGNLGLVTRRKLVDLSAGTNGQGHAGLRSDWEAPTTFWITNPQNDLINNAAAGAQDTGIWYLFRPSAQGLSKQSKAFDAMQPPNQTPLGRCENNVVHSNRVRGFMIEPTNHNPGLDNDNIAPDLKVNFDQYYPKTKDGKDANTVISGLVVYKNVEKGAWVRGGNFLFSNCRFSDNKASLTLATAGTHPDLPGAKGVTVGGIFVGWSTNVGTWDAALDSQFLDGNGNGFYGEVNDKQGGATTAGGRGVARRGYQCYDGPQTVQDSMFYNFDSDPYAFHSAIGYFYFNTWQNAVTNEFKNIMFDGRGKSVWLMRPVVDGSGTSIPETRLDGDTNASFRDRDGSVTGYEESTVINNFAYFKTAKCNERPEWNAVICPYRYANLWIENRNTPATQFGTADANRFFVTGLSLVRDQHTGTDHALFRQDLQGATAVNGNGQKFRYQAIVMMGASYTLHFPYATPPELRIQLNNVEKGQSLRIGICYPPGTSNFEVRRGLYVDNFRAPGTWESSAAVQKAGSLQDAAFLSGDAYYFDSGARLLFVSLVQRNVRSDYWNYCPPEGCEQLFVRATIPAGSPITSGTCIGTAYPAYQVTSGPLFDAALTPRGSSTAASSPGPVVPTPSSSSIRLPAPSTSPTVAPPGAASSTAVARLSSSTAGAPVVPASPTSGSVAMGNTFYLTMGQSLVTSEGTSAGRVTLPSAAGAQRVLDQPPSGAVVFAATGLNGAVTDAAGAASFRLALDANAGAGAGTQASLSFDFDGDGTADRVETFSYFPTDAAPGFETYSSQKATVKVVVAGAYRAFANGSLKLSLWTAIGSASVDVGVGGAALDATTSFITLPYSFGAPGPRPSSSYPPPPPSSSLPAKSSIAPSRPPAAVSSAAPQAPGSEWTLVWNDEFDGSALDSRHFDVEVNCWGGGNGEKQCYTSSADNVVVKDGYLSLIPKYYPNGYQGVSEANGCTLNNENSCTWTQPVTSGRVRTLKAVDGSWLYGRFEIRAKMPRGDYLWPAIWMLPTDNTYGVWAASGEIDIMEYRGQKRTVGEHTIHFGGAWPNNVYQGSGPVDYGVDLSADFHTYAVEWTRDGITWFLDDKQVHYASLVRNFFSGKGTSPYTADRQPFDQRFHILLNLAVAGGFFNGYPAFDAATASKTWTQPFVVDYVRVYRLAQCFNAKRDGDETDTDCGGTKCAPCSGRVVPPPAATCTDGQQNGDETGVDCGGSKCKACTAVPAAADALLFAVNGALSTTRGTTIVPVQLASSNGANRDGAIPPGAVSFVATGLYGDMKPSSSLSFSLYVDALQSIAVGVQAAMQFDFNGDGIWDRTEIFKYFPTDAVMGYEEYTERVGVLKSTGSLYAPLRNGAVRVSIWTAIGRAPALVASGDPRLLASRVILPYTFSPAPSAPAVCRAKAGAATGPLCDALRWACGQIACSAARSSCDAAVIQRNANYAFNEYYQRDKKIGATCDFSGTAELVTVSVQQVTAFDGYFLRCSLYADLDGNGVFDADEFSAVTNERGVAFIPLPSTVDDVSIVFDSVQGAECVDIMTGLRPLIPIRTRRQWPVANVLTSVLAAMCERGDNETSAALAIGKAILGTESVDVREYDPMAAKHAAHFGTYTALYSVVVQSYLVGGAAGKLSRRDAFEGQAGAMSAILDRIADAVDKAVRSAQPARILNDKDFVASLVSAAVAGAGGQISDAVANATAAASVRLAESFTLAASSAENTDAALKSLGAYGVVGQDYLVGLMKDLVGGKLSAGDFRANTTDAALAEQLTAAQASLPTYGCTDVNAANYDARATASDGTCSYGSTKSSSGASSALAIGLGVGISVAAAVIGVAAFVALRKRGGSGLRRKDRMTESKHELNELSYNRDN* # ORIGINAL: g3648.t1 original gene structure, not modified by PASA NODE_146_length_35037_cov_54.4821 AUGUSTUS gene 24884 26244 . - . ID=g3648;Name=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS mRNA 24884 26244 . - . ID=g3648.t1;Parent=g3648;Name=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 25911 26244 . - . ID=g3648.t1.exon1;Parent=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 25911 26244 . - 0 ID=cds.g3648.t1;Parent=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 25423 25478 . - . ID=g3648.t1.exon2;Parent=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 25423 25478 . - 2 ID=cds.g3648.t1;Parent=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 24884 25300 . - . ID=g3648.t1.exon3;Parent=g3648.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 24884 25300 . - 0 ID=cds.g3648.t1;Parent=g3648.t1 #PROT g3648.t1 g3648 MGSRWQREAAPSWRTRSTPFLSAVIILCGVAAVIYTVVSVQAVGAEKFATLSFQTSDDSAAVRVGGGAAKTLIFDAGEQGTILLNSSVDGATIRTLSKRIEQLESTVRLLADSLTALAARVALFQNDTFKTLSCPSNSVEIGTFCVLSAIQDLATYQASVLGCLDKGFSVCSSDELTQLCLRSRSNPSPSGVAVDFVFPDNEWFWTDQRYLGYESGSAAMYNGVVAFKRTGSKCIGDYKFVDAASSSITFWNPNQSIRSVCCRISRSS* # ORIGINAL: g3643.t1 original gene structure, not modified by PASA NODE_146_length_35037_cov_54.4821 AUGUSTUS gene 2 1093 . + . ID=g3643;Name=g3643.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS mRNA 2 1093 . + . ID=g3643.t1;Parent=g3643;Name=g3643.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 2 1093 . + . ID=g3643.t1.exon1;Parent=g3643.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 2 1093 . + 0 ID=cds.g3643.t1;Parent=g3643.t1 #PROT g3643.t1 g3643 PLTVTAAPITVNAPPVTIAAPVTIAAPVTIAEPLTVTAAPITVNAPPVTIAAPVTVTAALITVNAPQEIVSVAPVIVTVGALTVTGDAVTVQMAGVTVTAPPVTVTAEVTVTATDLVLVTVTEKPPVITAEAATVTVTGQPVVVTALPIIETVTVTQVAAGPTVTVSAPIPITIVAEAVRTLTVADEITKSAQLAVTEKIEDVRTVTSGPVNVELQPSEVIRTLTVTNNDPAPTVTATVTATATVSESAHLVSAKMENVKIVFVDSSQGMITACQGSSAAEQAGQGVKYVACVSSTNGGSSWRRQDPPSTDINGASRDYVSDSCNGSVQIGLSQRGVIFKQGSGEWRLALLLTCYGGSSCDAE* # ORIGINAL: g3645.t1 original gene structure, not modified by PASA NODE_146_length_35037_cov_54.4821 AUGUSTUS gene 15554 15958 . + . ID=g3645;Name=g3645.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS mRNA 15554 15958 . + . ID=g3645.t1;Parent=g3645;Name=g3645.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 15554 15958 . + . ID=g3645.t1.exon1;Parent=g3645.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 15554 15958 . + 0 ID=cds.g3645.t1;Parent=g3645.t1 #PROT g3645.t1 g3645 MEEAAFVLPDDTLLSAFLSDVASVEPDGKQTQPAATGGWQADAFQPTQASIETTPTPAPVQTTPAVPPQAASNPHANAGFVWTSESQITRILRPGAAYRNLNPFDVLLISHNALQDDVKKQYRKARACADTICA* # ORIGINAL: g3650.t1 original gene structure, not modified by PASA NODE_146_length_35037_cov_54.4821 AUGUSTUS gene 31445 34908 . - . ID=g3650;Name=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS mRNA 31445 34908 . - . ID=g3650.t1;Parent=g3650;Name=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 34269 34908 . - . ID=g3650.t1.exon1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 34269 34908 . - 0 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 33654 33821 . - . ID=g3650.t1.exon2;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 33654 33821 . - 2 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 33269 33418 . - . ID=g3650.t1.exon3;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 33269 33418 . - 2 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 32212 32906 . - . ID=g3650.t1.exon4;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 32212 32906 . - 2 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 31832 32023 . - . ID=g3650.t1.exon5;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 31832 32023 . - 0 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 31645 31722 . - . ID=g3650.t1.exon6;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 31645 31722 . - 0 ID=cds.g3650.t1;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS exon 31445 31522 . - . ID=g3650.t1.exon7;Parent=g3650.t1 NODE_146_length_35037_cov_54.4821 AUGUSTUS CDS 31445 31522 . - 0 ID=cds.g3650.t1;Parent=g3650.t1 #PROT g3650.t1 g3650 VESLSDAVILVRKVACGDTFTLCLTTSGEVYAFGSDYWGCLGQDSQLLGSFGPNGKEICSERPVKIVFDTTEPIVSIACGSEHAVALAADGTVYTWGNGENGRLGTGDEEPRGTPTRIHVPGNQSVFSISCGRDCTFMLCVGGRMFACGGNENNKLGVDRERGLLVAKKARTQEEIEEQYTVEDAMTPMPVRALGRHVIRDISAGVSHTAAIDVAGKLITIGANGCGQLGLGHTSSARTRRKANVVDALLGKPVGMVSCGEDFTIAVCNGNEIYTWGRGENGRLGNGRTANSSLPRPIFGSLHIVAGVACGQSCALVIAEQTVSSRVVQRSAETTSLHSSLASGCEPSAARIADAASSLHKAASLAKNSRQASGTPRRMSVNSKMGNGGSNGGDDGGVDRITEMTEEDSAARNGDDGTGADDDPQGDDVPSWLRDELDGAATVVSEASGSRVSSRSATGSTSGGTRTSASGSMKREDDDDTPDWLRRELEDAEDAPAPTPLYDVGPRRTALNDSEMPTVLVERMDNDDVGADVSTADSREGRTATKASCVGGMLQRGDSRDYEGLQARTLSPVRPDSGLGMSMASTVSILTHPDDDGDDLAADAPIKSILARNSQLRADIARTFAAQDQLLSSFLQTVQLERSTLDSLEDIVAALSVTLSRSLSVS* # PASA_UPDATE: g3647.t1, single gene model update, valid-1, status:[pasa:asmbl_1692,status:3], valid-1 NODE_146_length_35037_cov_54.4821 . gene 18956 24322 . - . ID=g3647;Name=g3647.t1 NODE_146_length_35037_cov_54.4821 . mRNA 18956 24322 . - . ID=g3647.t1;Parent=g3647;Name=g3647.t1 NODE_146_length_35037_cov_54.4821 . five_prime_UTR 23762 24322 . - . ID=g3647.t1.utr5p1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 23165 24322 . - . ID=g3647.t1.exon1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 23165 23761 . - 0 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 22183 22968 . - . ID=g3647.t1.exon2;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 22183 22968 . - 0 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 21829 22024 . - . ID=g3647.t1.exon3;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 21829 22024 . - 0 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 21349 21562 . - . ID=g3647.t1.exon4;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 21349 21562 . - 2 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 20943 21157 . - . ID=g3647.t1.exon5;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 20943 21157 . - 1 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 19698 20734 . - . ID=g3647.t1.exon6;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 19698 20734 . - 2 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . exon 18956 19573 . - . ID=g3647.t1.exon7;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . CDS 19040 19573 . - 0 ID=cds.g3647.t1;Parent=g3647.t1 NODE_146_length_35037_cov_54.4821 . three_prime_UTR 18956 19039 . - . ID=g3647.t1.utr3p1;Parent=g3647.t1 #PROT g3647.t1 g3647 MASSHRQRRNPLKWDIALAAASIAIMCILCTCTGLANAAKQSNPHMQRDAAAAKASSVILVTGAAGFVGMHAAIALSRDLRVRLIGIDNFSGGSDVDGILKQERAMQLKAHNVTIFNSDVCDMVLMEMLFRRFQFTHVVHLAALAGVRSSLLNPVAFVHANVRCFARLLDMARKAPEMYGGQIPKVVFASSSSVYGMSSKSTNSVKDRTDGQTSVYGASKKADELLAHAYHVRFGMTLVGLRFFTVYGPWNRHDMAMYLFSDAIWKGDEIDVFDRGNLKRDFTYVTDIVRGVIAAVHKKIAGGFRIFNLGNTNPHTVSYLIGEIERELGQKARRRFMPFQKGDVVQTSADVTETTEALGYEPLTPLTEGVRRFADWYREFADLLARDNGTSSGRRGPAFIKALLKQRRAMHSAGIEMVTSLSNNATTVRTRADYDRWKAEVADPHKIALPDRSPRTFTFYKGRDSSGGDVIQSIRHARNPVEMQRMCDAIPMCVAFNTDGLLKINVQSQAKWRSYNSSGMGGLYVADINPCERDIHACHERSQCMHVGPAKFRCVCKDGYVGNGISCTPLFDTDGLPTDPTVLERVRPFLKTPLPPRNYTFIPFLDSPGYDLKHADGLERNIPQLKALCDSTPDCGAFNTNGRLKTVVGTPRSEWKQWTGNVTEGFYIAHVDHCAAGSHDCHHRARCMYVPEGLFECQCLPGFTGDGRHCRSVLEAIESDSFTTDDPEPPAVLNYVARIDEKPAEADYDMNASKMRPPWLVNVQVAMDRRPKLIDDHMYQQQLTRISREHRIVDAQKRDKHADSNGESGVGGDAAAAVDAIAAAPPEAAADGTGGRLPLGSRGKGGKWKKGQVVDILLAGDPEHYKGLLAVIESVRRNTPDPSRVRFHIALANDGLKNTIPFERMLECYGIAKYDEEGKDIIELRHFNARVHAKHALTVHGAKSVFGNLASDANLARFYFARMFPFVTKAIYLDADVVVRGDIVGLWQVVQSMPTLFAAVKRESPTYGTLFGQKSDLVRTKLEKRFNRTYRDDDATFNAGVYAVDLGRWQALNVTAEAEYWIDSNARERLWSFGSQPVLLLSMAGRWTELPREWNFDGLGWRRSDDVNKDLMTKAKLLHFSGRQKPWTAQANDFSTLWREIAGLRECSSHGRCHSVLGCICEEGYEGISCDMKVQEGAIAGGANSGRIRGRV* # PASA_UPDATE: g5346.t1, single gene model update, valid-1, status:[pasa:asmbl_2622,status:12], valid-1 NODE_178_length_33402_cov_46.9984 . gene 5107 8473 . - . ID=g5346;Name=g5346.t1 NODE_178_length_33402_cov_46.9984 . mRNA 5107 8473 . - . ID=g5346.t1;Parent=g5346;Name=g5346.t1 NODE_178_length_33402_cov_46.9984 . five_prime_UTR 8430 8473 . - . ID=g5346.t1.utr5p1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 8307 8473 . - . ID=g5346.t1.exon1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 8307 8429 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 8011 8041 . - . ID=g5346.t1.exon2;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 8011 8041 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 7738 7854 . - . ID=g5346.t1.exon3;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 7738 7854 . - 2 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 7387 7533 . - . ID=g5346.t1.exon4;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 7387 7533 . - 2 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 6925 7085 . - . ID=g5346.t1.exon5;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 6925 7085 . - 2 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 6635 6703 . - . ID=g5346.t1.exon6;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 6635 6703 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 6246 6419 . - . ID=g5346.t1.exon7;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 6246 6419 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 5963 6082 . - . ID=g5346.t1.exon8;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 5963 6082 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . exon 5107 5838 . - . ID=g5346.t1.exon9;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . CDS 5419 5838 . - 0 ID=cds.g5346.t1;Parent=g5346.t1 NODE_178_length_33402_cov_46.9984 . three_prime_UTR 5107 5418 . - . ID=g5346.t1.utr3p1;Parent=g5346.t1 #PROT g5346.t1 g5346 MRMVIASRFARAFVPQTLVFSVRAFSVQATRNGSARVQMAWSLATPASLKHGFQVRGMADVFNRTKPHCNIGTIGHVDHGKTTLTAAITKVLAKQGKAKFKAYGDIDNAPEEKARGITIATAHVEYETDKRHYAHVDCPGHSDYIKNMITGAAQMDGAIMVVSGTDGGMPQTKEHLLLAKQVGVDHIVVYINKADMVEDKEMLDLVEMEMRDLLATYGYDGDKTPIIRGSALCALEDKTPELGEQSIFALLKAVDEHIPQPLRELDKPFLMPVEGVFSIAGRGTVVTGKVERGVITKGEEVEIMGYTKDLIKTTVTGIEMFRKLLDRGEAGDNMGALIRGVKREDLRRGQVMAAPGTVKCSTKVKAEIYVRKAEEGGRHTPFVSNYRPQMFFRTSDVTVSIQLPKNVEMVMPGDNTSVDMEIMFPVVVEQGTRFTIREGNKTVGTGVVTQLIE* # ORIGINAL: g5352.t1 original gene structure, not modified by PASA NODE_178_length_33402_cov_46.9984 AUGUSTUS gene 27234 32321 . + . ID=g5352;Name=g5352.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS mRNA 27234 32321 . + . ID=g5352.t1;Parent=g5352;Name=g5352.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 27234 32321 . + . ID=g5352.t1.exon1;Parent=g5352.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 27234 32321 . + 0 ID=cds.g5352.t1;Parent=g5352.t1 #PROT g5352.t1 g5352 MAPTVASLPNTAEGAGGRPQSAGSVRLEPVRRMSFTRGIAPPDDSAERILASAHIQSNTDLVAVGRSRRQQTADAVKARIAGAADSKETSNFENIGEYKIALRTALSFSIGEMNRWIASKCDTRKGSVLEWLVALPLVLRSNAACAESISMSDVDVEWLVRKAVMTLSVLLGSEDEQRAHAIRRGVTRHEMDGFVARAGVLRVDSGQTTLTVAGASTQPADVMSGTSQMRADNEWVHALATARVAPGDAAEYLLALFIYTANCKSRAVVDGWELSTEDEWVMISPPKRPEVHGYNSSPWAVMNWTLRVAYDASQDEHVRRLAADSLAPFAPLRDRIDEALSVLPKSRDIVFRGVNIPGLAHRYVLSHPVVFPPFTSTSTVGLEALAYMKGKAGTFFVIRSHSASRVDFVSVIPSEAEKLLPSFSRFVVLQKTSTTVLRMLECRYDIVTLAESGDEACTDADAVNAYVRSVRQMHFVYDGYLAGTYVEGRVGPLPPPCTLTSPFFPTLLKWLHGEGPSDRARGHLILMGSGGSGKTSATLAALCRLAGTEGVVPVFVPLATVKGLLTEVGALDRHIAQVLCLTSAQIELLMTTHTLVLLLESLDEVSIATAGVREGNARSAILGILDRNPRASRARVILSCRDEFLTRLGIRPHEMFGMSATYQYVQPFTMDDVSAFVRKQCVALTHDETTAKVRAVVAVARALGAMLNPCVLHMACRVDSVRLAQAVADAVGTLSPSSIYEAYLCQQMGDDPAGLRGMQRTALVMVSGDDWHMSLGDVAAAFEDVGVPVDEFWSRYLGRIPRRVENDADPSGAFAWWHRSIGEYLAARAFWTEPEAAIAAVQRPFSLDTPGVLSFFAGLARADLQNRSAICGGTLMPAVLKSRDTCDPAVLAHASNAIALVCASGHFMHAYDMSHIVVEDANLGGASFQYATLREAVFRRCDLACASFDFADVTGAQFPQSTCEIVLPVLSGHTYVVQDVCFSADGRYIASASMDNTVRVWDASNGKEVCVLAGHEYGVEAVSFAPDGSHVATGSNDGMIRLFEVRTGEEVKRLQGHERGVNSVAFSADGDLLASAAGDKTARVWRWATGDVVARLTHRYEVRDACFSRDGLSLLTGSDDGAVRVWSIASGVEDKTFAGHLDGVTGVRFSPDGTLIASCSRDGSVRVWNVSAGTAVRALVGHTQAVEGVCFSPDGSALVTCADDKTVRVWDVVTGMHVRTIEKEADSIRGVCWSPDGRLIASGCDSAVCVWDAHSRTSVSNSNGHDGIVTCVGMSPSANMVVSASTDKTVRVWERTTGRMVCAVQGHTGIVMSACFSPNAKMIASGAWDGKIGLWDSARPTEEPRFLVGHTSLVMCVAYSLDGRLIVSASADCTLRLWDAAKLKAVRILRGHTADVTCACFSHSDAVVASGSDDKAVALWETSTGRMIHTLTGHRGGVKCVAMATNDGLIASGADDASVIVWDAVSGALLRVLEGHGKTVNSVCFVADSTVLASGSSDASVRLWNVQTGEAGLVIWGHTAFVQSVAFSADGRFLCSGSGDQCIRVWDSAIASAAITKDAIGGDGGVVVTGAGTSWRDAWRGASCTLTDGASLNESDRIVHITRAYPLAMSVGNRNQFSCVGCIGAVVDGENTSPGLLACFGADGGAYPDVKGVDYCLALVRMFGLHEIQPSGGANDSDDARDYDDPPYDSESYNA* # ORIGINAL: g5344.t1 original gene structure, not modified by PASA NODE_178_length_33402_cov_46.9984 AUGUSTUS gene 93 857 . + . ID=g5344;Name=g5344.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS mRNA 93 857 . + . ID=g5344.t1;Parent=g5344;Name=g5344.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 93 857 . + . ID=g5344.t1.exon1;Parent=g5344.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 93 857 . + 0 ID=cds.g5344.t1;Parent=g5344.t1 #PROT g5344.t1 g5344 SLEPQLDIRYRLNFFFVDPLIKVALVVLRVFFTEKPNVYLSFMVVIAAGTAVYNIKLRPCHLAWINAAVAVGYISAALTATLLLIGNASSHTKAVYGIPAVWGLATAATCVYLKRMYPFSVIAIVNPVKEKSAKARRLLMSLKKVITNRMSVVGIADGRLSAAPVPAAPEAPAAEPSSMWSLHVWRQGKHISNSTPDMVDSAMDVTFGSVDSVADSSTNESFLDIEIAAFTAISPPSTALKKWGGSGGCSCGCC* # ORIGINAL: g5345.t1 original gene structure, not modified by PASA NODE_178_length_33402_cov_46.9984 AUGUSTUS gene 1813 4158 . - . ID=g5345;Name=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS mRNA 1813 4158 . - . ID=g5345.t1;Parent=g5345;Name=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 4133 4158 . - . ID=g5345.t1.exon1;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 4133 4158 . - 0 ID=cds.g5345.t1;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 3522 3645 . - . ID=g5345.t1.exon2;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 3522 3645 . - 1 ID=cds.g5345.t1;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 2694 3215 . - . ID=g5345.t1.exon3;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 2694 3215 . - 0 ID=cds.g5345.t1;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 2279 2400 . - . ID=g5345.t1.exon4;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 2279 2400 . - 0 ID=cds.g5345.t1;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 1813 1942 . - . ID=g5345.t1.exon5;Parent=g5345.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 1813 1942 . - 1 ID=cds.g5345.t1;Parent=g5345.t1 #PROT g5345.t1 g5345 MSDTADLDRQIELLRNCEIIKESEVKALCAKAREILVEESNVQRVSSPVTICGDIHGQFFDLMELFKVGGRVPDTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECVRKYGSVNVWRYCTEIFDYLSLSALIDDKIFCVHGGLSPSIGTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIEGWGVSPRGAGYLFGSDVAGQFNLKNSLDLICRAHQLVMEGYKMHFNDTVATVWSAPNYCYRCGNVAAILELDEHLAKNFKIFEAAPQETRGVPAKRPQADYFL* # PASA_UPDATE: g5349.t1, single gene model update, valid-1, status:[pasa:asmbl_2624,status:12], valid-1 NODE_178_length_33402_cov_46.9984 . gene 17532 20333 . - . ID=g5349;Name=g5349.t1 NODE_178_length_33402_cov_46.9984 . mRNA 17532 20333 . - . ID=g5349.t1;Parent=g5349;Name=g5349.t1 NODE_178_length_33402_cov_46.9984 . five_prime_UTR 20236 20333 . - . ID=g5349.t1.utr5p1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 20070 20333 . - . ID=g5349.t1.exon1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 20070 20235 . - 0 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 19621 19743 . - . ID=g5349.t1.exon2;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 19621 19743 . - 2 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 19189 19369 . - . ID=g5349.t1.exon3;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 19189 19369 . - 2 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 18637 18721 . - . ID=g5349.t1.exon4;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 18637 18721 . - 1 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 18261 18350 . - . ID=g5349.t1.exon5;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 18261 18350 . - 0 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 17950 18036 . - . ID=g5349.t1.exon6;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 17950 18036 . - 0 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . exon 17532 17857 . - . ID=g5349.t1.exon7;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . CDS 17708 17857 . - 0 ID=cds.g5349.t1;Parent=g5349.t1 NODE_178_length_33402_cov_46.9984 . three_prime_UTR 17532 17707 . - . ID=g5349.t1.utr3p1;Parent=g5349.t1 #PROT g5349.t1 g5349 MSGAAPEERALIMIKDAEKKLKSGGLFGLFGGTQKYEDAFDLYSRAANLYKMAKKFKEAGDAFFEAAKLQMKLANKHEAASQFVDAANCYKKGNPLAAVDCLTKAVEIYLDMGRFAMAAKQQMTVAEIYETEAVDLAKAMAAYEQAADWYQGEDSTSTANKCLLKVALYSAQLEQYAKAIEIYEKVGSAAIDNSLLKWGAKEYFLKAGICHMCTRDLVETQRALERYLSIYAGFGDTRECKLLHDMLASLEEQDAERLTSVIAEYDAITRLDGWMTTMLLRIKKGVTVQPSVL* # PASA_UPDATE: g5348.t1, single gene model update, valid-1, status:[pasa:asmbl_2623,status:12], valid-1 NODE_178_length_33402_cov_46.9984 . gene 13022 16889 . - . ID=g5348;Name=g5348.t1 NODE_178_length_33402_cov_46.9984 . mRNA 13022 16889 . - . ID=g5348.t1;Parent=g5348;Name=g5348.t1 NODE_178_length_33402_cov_46.9984 . five_prime_UTR 16825 16889 . - . ID=g5348.t1.utr5p1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 16764 16889 . - . ID=g5348.t1.exon1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 16764 16824 . - 0 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 16486 16607 . - . ID=g5348.t1.exon2;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 16486 16607 . - 2 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 15476 16323 . - . ID=g5348.t1.exon3;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 15476 16323 . - 0 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 15119 15251 . - . ID=g5348.t1.exon4;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 15119 15251 . - 1 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 14607 14902 . - . ID=g5348.t1.exon5;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 14607 14902 . - 0 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 14244 14433 . - . ID=g5348.t1.exon6;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 14244 14433 . - 1 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 13951 14082 . - . ID=g5348.t1.exon7;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 13951 14082 . - 0 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . exon 13022 13847 . - . ID=g5348.t1.exon8;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . CDS 13101 13847 . - 0 ID=cds.g5348.t1;Parent=g5348.t1 NODE_178_length_33402_cov_46.9984 . three_prime_UTR 13022 13100 . - . ID=g5348.t1.utr3p1;Parent=g5348.t1 #PROT g5348.t1 g5348 MRSLAIVAALLAVVVASAYAEEEGLYVNPKSYIKFHPHVRVMTPDEVAHIQECHDAASKCRITREAAETMNLEEDHIIVALADAANTDDQRNVIMRVGRITRDDTHAEFEHTKPLASEIIEEADIEVTSVPAVERLADGSTRRRRDLLSSLLGFLTSDQSYKLNDYITAYKKGPNFNIAVKSFKFQITLAEGIKVFELILRASAKASIGIKAETPKLLSYDVEFLDTGKITLGSFSFAAGPVPISISVVARNYLQAIVDLDSQFKLDYGFQAEGFVEIGVTYDKSTNAGFQTVFNRGFTSGRYGQITLPSWTLTTTIQDVAELSAQIGIGVGPARVDFFGPYFRLIPGVTLKVSPTTYDARFFIDSKVGIKGPDWQVLWFKIALEWGMSFRLYEVILETGEWKDLKFTQYITQALFDATPASIADASVNTLLNMDSTPPVPKVVPQTDYSVTVFTGYADSAGTDADVYMQIYSSSGDVSDKIWLDTTNDDFQNGQSDLFLIKGPAYPSISQIKFGHDSTGIAPGWFLDKAIIMSGATGTRYTAVARDLDKYPGLAGQWLQADGANAAVALVRTYTDSQLAQVAYKVAFRLGTFLGSGTSARLTITVTGSSSAATTDVIPGWDTFKKGNLTEITIIATSPLGSVVSLTVSHDGTTAKGQSEDPSFYVEQATVTTPDGTKTLFAPRVMLSNSPVKGVTWMPVSQSEYAGFTYRFIINVNSGSDSGTEAPYDPARPISIYITGTAGTRGMGAGYSLASGSSKIKVVTSDIDLGADITKVKLCNPFRDSLVTDSIEFRDPARQKAYTFTCSFDLGCIWGIFCSTSAWYCDECTTRTVGPIVTPVVL* # PASA_UPDATE: g5351.t1, single gene model update, valid-1, status:[pasa:asmbl_2625,status:12], valid-1 NODE_178_length_33402_cov_46.9984 . gene 22273 26593 . - . ID=g5351;Name=g5351.t1 NODE_178_length_33402_cov_46.9984 . mRNA 22273 26593 . - . ID=g5351.t1;Parent=g5351;Name=g5351.t1 NODE_178_length_33402_cov_46.9984 . five_prime_UTR 26472 26593 . - . ID=g5351.t1.utr5p1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 26403 26593 . - . ID=g5351.t1.exon1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 26403 26471 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 26151 26279 . - . ID=g5351.t1.exon2;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 26151 26279 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 25903 26022 . - . ID=g5351.t1.exon3;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 25903 26022 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 25571 25678 . - . ID=g5351.t1.exon4;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 25571 25678 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 25098 25301 . - . ID=g5351.t1.exon5;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 25098 25301 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 24366 24490 . - . ID=g5351.t1.exon6;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 24366 24490 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 23916 24114 . - . ID=g5351.t1.exon7;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 23916 24114 . - 1 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 23609 23725 . - . ID=g5351.t1.exon8;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 23609 23725 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 23280 23381 . - . ID=g5351.t1.exon9;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 23280 23381 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . exon 22273 23117 . - . ID=g5351.t1.exon10;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . CDS 22515 23117 . - 0 ID=cds.g5351.t1;Parent=g5351.t1 NODE_178_length_33402_cov_46.9984 . three_prime_UTR 22273 22514 . - . ID=g5351.t1.utr3p1;Parent=g5351.t1 #PROT g5351.t1 g5351 MFSAKEFKVRVTTMDAELEFTTPATTTGQQLFDVIVKTIGIRERWYFGLTFVDHKGYTTWLKMQKKVLSQDVPKENPIPFKFRVKFFPEDVSELIQEPTQHLFYLQVRDAILSEEVYCPPETSVLLASYALQAKFGEIGTQKLPDGLLASGRLIPRRVIEQFKMTEDMWMERVNAWWKEHKYLLRFEAELEYLKIAQDLEMYGLSYFEIKNKKGTDLWLGVEAGGLNIYEHNQKLAPKIAFPWAEVQNISFSDKKFIIKTVDKKSPDFVMVAPRLRINKRILQLCIGNHELYMRRRRADSMEVQQMKSLAKDERNKKMMERDRLVAEKNARANAEKDKKDLEDRVRRAEQQARAAQEALLRTEETAELLAEKAKIATEEAMLLARKAQEAEEEKARVLATVAKTVEEKAALEARIHEVSVNAAQINIRAKEAEENALAIKQEAIRRISIDSAPVVFHSAAPTQDSIAEESKKTEGKAELTTDKDFEELAARIEEERDAYVARNEELAKQLEKMRREMEKLKKERVVKISAPGGSSAAAAAAAAAAAAAAAEPFDQFGDTLNLSNGTANKYKTLRAIKRGTAKERIAYFENL* # ORIGINAL: g5347.t1 original gene structure, not modified by PASA NODE_178_length_33402_cov_46.9984 AUGUSTUS gene 9287 10697 . + . ID=g5347;Name=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS mRNA 9287 10697 . + . ID=g5347.t1;Parent=g5347;Name=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 9287 9379 . + . ID=g5347.t1.exon1;Parent=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 9287 9379 . + 0 ID=cds.g5347.t1;Parent=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 9513 9715 . + . ID=g5347.t1.exon2;Parent=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 9513 9715 . + 0 ID=cds.g5347.t1;Parent=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 9869 10697 . + . ID=g5347.t1.exon3;Parent=g5347.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 9869 10697 . + 1 ID=cds.g5347.t1;Parent=g5347.t1 #PROT g5347.t1 g5347 MALWGAGVSYTLAGLSYWAYHSQHRKIDAIRSAVQVPIEDAEQLVSSTPGGCIPYAVVTGTVNADSDISCLYNTTQRGVAYILTLKEHKAEWSSGTKAWQNVVRVLSESKRDVPFWIEPPTASSSAMGSPTSRIAVSGWDRASGLSLPVVYDKFEPAASTATQSVVDYMRGELKKGIEHVEQVLPRGTRLTVVGELARAAPDVPLAGSASVSALTATVTVIRPPSNGTAYYASTRGIDVIIEQEVASSTVWKWVGVACAAVGSAFILYRLKRVYSAWRESRKRDEMRREMERLRREALSPSTSPLSSSPSTAAPKPSGGGSEGSLSDCVVCWSRPSNAVLLDCGHLCVCAECSENLTQCPLCRGTIARVVRAFT* # ORIGINAL: g5350.t1 original gene structure, not modified by PASA NODE_178_length_33402_cov_46.9984 AUGUSTUS gene 20749 21657 . - . ID=g5350;Name=g5350.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS mRNA 20749 21657 . - . ID=g5350.t1;Parent=g5350;Name=g5350.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 21278 21657 . - . ID=g5350.t1.exon1;Parent=g5350.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 21278 21657 . - 0 ID=cds.g5350.t1;Parent=g5350.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS exon 20749 20926 . - . ID=g5350.t1.exon2;Parent=g5350.t1 NODE_178_length_33402_cov_46.9984 AUGUSTUS CDS 20749 20926 . - 1 ID=cds.g5350.t1;Parent=g5350.t1 #PROT g5350.t1 g5350 MGDDMRNAMEGYHDETDTLMEDPEVNMSDIDGLGDLIPLDDLNNGYTVDANDIHIEANHFDNDDTDACQEGPPSIEMAGEAAQPPQESPIAPSDDNVAAQPTGDGDAWPPSGRLYTYTMLNGKRRVKSKHYAKCHKGVVSPEGTGESHEGTPHTAADSEGPKEDAPTSSDDEITDDDGAGPSERT* # ORIGINAL: g2283.t1 original gene structure, not modified by PASA NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS gene 961 2145 . + . ID=g2283;Name=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS mRNA 961 2145 . + . ID=g2283.t1;Parent=g2283;Name=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS exon 961 1100 . + . ID=g2283.t1.exon1;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS CDS 961 1100 . + 0 ID=cds.g2283.t1;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS exon 1229 1455 . + . ID=g2283.t1.exon2;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS CDS 1229 1455 . + 1 ID=cds.g2283.t1;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS exon 1636 1688 . + . ID=g2283.t1.exon3;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS CDS 1636 1688 . + 2 ID=cds.g2283.t1;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS exon 1867 2145 . + . ID=g2283.t1.exon4;Parent=g2283.t1 NODE_4128_length_2145_cov_23.315_potentialcontaminant AUGUSTUS CDS 1867 2145 . + 0 ID=cds.g2283.t1;Parent=g2283.t1 #PROT g2283.t1 g2283 MEFAEHGDVRQYVHKYGKELSAVDLLCFCIDIARGMEHFANSQIIHRDLAARNCMVVGGPRSPNPQEKAWTLGSKAQVLVKIADFGLSRDSGDYYHAKTDRKLPLKWMAPESLAKRIFTHSSDVWSYGVTAWEIFSKGDKPYPGIENRDIAAYLAQGRRMLAIEGCPVAVHAAMEACWRKHPETRPNFAQVVLMMRRAMHALCTGVGGGAIDNSAANADAIPDASAQEVPALP # PASA_UPDATE: g9057.t1, single gene model update, valid-1, status:[pasa:asmbl_4043,status:3], valid-1 NODE_2324_length_6730_cov_43.1441 . gene 883 2716 . + . ID=g9057;Name=g9057.t1 NODE_2324_length_6730_cov_43.1441 . mRNA 883 2716 . + . ID=g9057.t1;Parent=g9057;Name=g9057.t1 NODE_2324_length_6730_cov_43.1441 . five_prime_UTR 883 965 . + . ID=g9057.t1.utr5p1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . exon 883 1427 . + . ID=g9057.t1.exon1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . CDS 966 1427 . + 0 ID=cds.g9057.t1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . exon 1538 1640 . + . ID=g9057.t1.exon2;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . CDS 1538 1640 . + 0 ID=cds.g9057.t1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . exon 1802 2144 . + . ID=g9057.t1.exon3;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . CDS 1802 2144 . + 2 ID=cds.g9057.t1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . exon 2252 2408 . + . ID=g9057.t1.exon4;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . CDS 2252 2408 . + 1 ID=cds.g9057.t1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . exon 2524 2716 . + . ID=g9057.t1.exon5;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . CDS 2524 2700 . + 0 ID=cds.g9057.t1;Parent=g9057.t1 NODE_2324_length_6730_cov_43.1441 . three_prime_UTR 2701 2716 . + . ID=g9057.t1.utr3p1;Parent=g9057.t1 #PROT g9057.t1 g9057 MGRSLVKEKIIVHFYGKKVDVTGWSAQHPGGEKVLRIFNGRDATEQFEAMHSKEAHKRLEKFLKYSPPVEPSDIKVSAPTYLDVKANAKMQAAKDDLVILRKEVEKLGLFRPNIFFEIAKIIYVHVCVLGGGYLMGATDYTLLGAILLTAGWHQSGWVAHDYAHHSVFASPAANDIMAAWLGGLQGYTVSWWKARHCTHHVTTNEVGNDPDIRTAPVFRFVQQYRDLKARLRTPLSKLQSFYFLPMMAVLDLYWRFESIQYVALRIRKYAAQAALLVLHYAFLVWIAFNCGWMPLVIASFVRGFGTAVVVFSSHYAEERMPKEHELSFLEQTTRTSRNIEGSSFLHFMTGYISYQVEHHLIPTLPRSNLPKISPMVKALCRKHNLPYNQSSLVACVMRNIKSLSPNFSLDDLE* # PASA_UPDATE: g9058.t1, single gene model update, valid-1, status:[pasa:asmbl_4045,status:3], valid-1 # PASA_UPDATE: g9058.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4044,status:3], valid-1 NODE_2324_length_6730_cov_43.1441 . gene 3179 5479 . + . ID=g9058;Name=g9058.t1 NODE_2324_length_6730_cov_43.1441 . mRNA 3179 5479 . + . ID=g9058.t1;Parent=g9058;Name=g9058.t1 NODE_2324_length_6730_cov_43.1441 . five_prime_UTR 3179 3512 . + . ID=g9058.t1.utr5p1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . five_prime_UTR 3643 3668 . + . ID=g9058.t1.utr5p2;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . exon 3179 3512 . + . ID=g9058.t1.exon1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . exon 3643 3932 . + . ID=g9058.t1.exon2;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . CDS 3669 3932 . + 0 ID=cds.g9058.t1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . exon 4085 4397 . + . ID=g9058.t1.exon3;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . CDS 4085 4397 . + 0 ID=cds.g9058.t1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . exon 4579 5479 . + . ID=g9058.t1.exon4;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . CDS 4579 4850 . + 2 ID=cds.g9058.t1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . three_prime_UTR 4851 5479 . + . ID=g9058.t1.utr3p1;Parent=g9058.t1 NODE_2324_length_6730_cov_43.1441 . mRNA 3179 5479 . + . ID=g9058.t1.1.5b6be70b;Parent=g9058;Name=g9058.t1 NODE_2324_length_6730_cov_43.1441 . five_prime_UTR 3179 3668 . + . ID=g9058.t1.1.5b6be70b.utr5p1;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . exon 3179 3932 . + . ID=g9058.t1.1.5b6be70b.exon1;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . CDS 3669 3932 . + 0 ID=cds.g9058.t1.1.5b6be70b;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . exon 4085 4397 . + . ID=g9058.t1.1.5b6be70b.exon2;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . CDS 4085 4397 . + 0 ID=cds.g9058.t1.1.5b6be70b;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . exon 4579 5479 . + . ID=g9058.t1.1.5b6be70b.exon3;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . CDS 4579 4850 . + 2 ID=cds.g9058.t1.1.5b6be70b;Parent=g9058.t1.1.5b6be70b NODE_2324_length_6730_cov_43.1441 . three_prime_UTR 4851 5479 . + . ID=g9058.t1.1.5b6be70b.utr3p1;Parent=g9058.t1.1.5b6be70b #PROT g9058.t1 g9058 MPSTVPAVVEETPFNPVNPNKKEGEFRNYHNSARQAVVERTYKLMHTNQTYDFSMQKRAQWCKLDKAEMDIFEALELLNQLVDDSDPDTNLPNSMHAYQTAERIRRDHPDEDWFHLTGLVHDLGKVLALWGEPQWACVGDTFPLGCKFSDKCVFPDTFSENPDSSNPKYNTEHGIYTPNCGLDDVTMSWGHDEYMYQVLQGNRSTLPLPGLYVIRYHSFYPWHKESAYNHLTNERDQEMFKWVKEFNKYDLYSKSDDLPDIDEIKPYYESLVAKYMPGKLRW* #PROT g9058.t1.1.5b6be70b g9058 MPSTVPAVVEETPFNPVNPNKKEGEFRNYHNSARQAVVERTYKLMHTNQTYDFSMQKRAQWCKLDKAEMDIFEALELLNQLVDDSDPDTNLPNSMHAYQTAERIRRDHPDEDWFHLTGLVHDLGKVLALWGEPQWACVGDTFPLGCKFSDKCVFPDTFSENPDSSNPKYNTEHGIYTPNCGLDDVTMSWGHDEYMYQVLQGNRSTLPLPGLYVIRYHSFYPWHKESAYNHLTNERDQEMFKWVKEFNKYDLYSKSDDLPDIDEIKPYYESLVAKYMPGKLRW* # PASA_UPDATE: g9059.t1, single gene model update, valid-1, status:[pasa:asmbl_4042,status:12], valid-1 NODE_2324_length_6730_cov_43.1441 . gene 5522 6711 . - . ID=g9059;Name=g9059.t1 NODE_2324_length_6730_cov_43.1441 . mRNA 5522 6711 . - . ID=g9059.t1;Parent=g9059;Name=g9059.t1 NODE_2324_length_6730_cov_43.1441 . exon 6568 6711 . - . ID=g9059.t1.exon1;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . CDS 6568 6711 . - 0 ID=cds.g9059.t1;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . exon 6301 6462 . - . ID=g9059.t1.exon2;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . CDS 6301 6462 . - 0 ID=cds.g9059.t1;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . exon 6092 6165 . - . ID=g9059.t1.exon3;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . CDS 6092 6165 . - 0 ID=cds.g9059.t1;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . exon 5522 5858 . - . ID=g9059.t1.exon4;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . CDS 5735 5858 . - 1 ID=cds.g9059.t1;Parent=g9059.t1 NODE_2324_length_6730_cov_43.1441 . three_prime_UTR 5522 5734 . - . ID=g9059.t1.utr3p1;Parent=g9059.t1 #PROT g9059.t1 g9059 MPGHQKCNFADGVTAGTHHSFVCLQSSTGVRGIYKGLLPTVLKQGSNQAIRFLVYSHLREFLTDGDPHKKLNVFQTLSCGAIAGAASVFGNTPIDVVKTRMQGLESSKYKSSWDCAKRIWREEGFKAFYKGTTPRLGRVCADVAIVFTLYEQITNVLDMIWNTDNAD* # PASA_UPDATE: g5089.t1, single gene model update, valid-1, status:[pasa:asmbl_6888,status:12], valid-1 NODE_4034_length_2308_cov_37.601 . gene 87 1370 . + . ID=g5089;Name=g5089.t1 NODE_4034_length_2308_cov_37.601 . mRNA 87 1370 . + . ID=g5089.t1;Parent=g5089;Name=g5089.t1 NODE_4034_length_2308_cov_37.601 . five_prime_UTR 87 87 . + . ID=g5089.t1.utr5p1;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . exon 87 160 . + . ID=g5089.t1.exon1;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . CDS 88 160 . + 0 ID=cds.g5089.t1;Parent=g5089.t1;5_prime_partial=true NODE_4034_length_2308_cov_37.601 . exon 364 581 . + . ID=g5089.t1.exon2;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . CDS 364 581 . + 2 ID=cds.g5089.t1;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . exon 854 1370 . + . ID=g5089.t1.exon3;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . CDS 854 1039 . + 0 ID=cds.g5089.t1;Parent=g5089.t1 NODE_4034_length_2308_cov_37.601 . three_prime_UTR 1040 1370 . + . ID=g5089.t1.utr3p1;Parent=g5089.t1 #PROT g5089.t1 g5089 LGGLVLERFQSKYLDMAVLSPIMNGVGGSIACVQASRIATSMYMNVEASHRRTGIVFALLCIPNQVLCLSIILFFDLGHSTFSMWLAMVYLFCSFTQVTILLLLCGWLVPFLFRRGFDPGNISLPLLTACGDVLGTGLLVLGFKFLDKIGDGDGDYGD* # ORIGINAL: g3341.t1 original gene structure, not modified by PASA NODE_3515_length_3287_cov_34.463 AUGUSTUS gene 2 655 . + . ID=g3341;Name=g3341.t1 NODE_3515_length_3287_cov_34.463 AUGUSTUS mRNA 2 655 . + . ID=g3341.t1;Parent=g3341;Name=g3341.t1 NODE_3515_length_3287_cov_34.463 AUGUSTUS exon 2 289 . + . ID=g3341.t1.exon1;Parent=g3341.t1 NODE_3515_length_3287_cov_34.463 AUGUSTUS CDS 2 289 . + 0 ID=cds.g3341.t1;Parent=g3341.t1 NODE_3515_length_3287_cov_34.463 AUGUSTUS exon 449 655 . + . ID=g3341.t1.exon2;Parent=g3341.t1 NODE_3515_length_3287_cov_34.463 AUGUSTUS CDS 449 655 . + 0 ID=cds.g3341.t1;Parent=g3341.t1 #PROT g3341.t1 g3341 PPPAAIILWELMAARLPYLYCTRRLCTQAQFARKIAYGGIRPQPVPAMLPAPYATLMRECWVDAPWDRPSFRQIVERLQAMDITDWPEPEIPPFVKGDLMTDYSHELVTINDAPKPTSRPVSSNAGAITESHATIGDEMFCHEDLPPGNDDFLPSIRELPDEEG* # PASA_UPDATE: g3342.t1, single gene model update, valid-1, status:[pasa:asmbl_6168,status:3], valid-1 NODE_3515_length_3287_cov_34.463 . gene 831 3185 . - . ID=g3342;Name=g3342.t1 NODE_3515_length_3287_cov_34.463 . mRNA 831 3185 . - . ID=g3342.t1;Parent=g3342;Name=g3342.t1 NODE_3515_length_3287_cov_34.463 . five_prime_UTR 3057 3185 . - . ID=g3342.t1.utr5p1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . five_prime_UTR 2805 2899 . - . ID=g3342.t1.utr5p2;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 3057 3185 . - . ID=g3342.t1.exon1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 2664 2899 . - . ID=g3342.t1.exon2;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . CDS 2664 2804 . - 0 ID=cds.g3342.t1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 2329 2466 . - . ID=g3342.t1.exon3;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . CDS 2329 2466 . - 0 ID=cds.g3342.t1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 1942 2050 . - . ID=g3342.t1.exon4;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . CDS 1942 2050 . - 0 ID=cds.g3342.t1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 1552 1697 . - . ID=g3342.t1.exon5;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . CDS 1552 1697 . - 2 ID=cds.g3342.t1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . exon 831 1350 . - . ID=g3342.t1.exon6;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . CDS 1096 1350 . - 0 ID=cds.g3342.t1;Parent=g3342.t1 NODE_3515_length_3287_cov_34.463 . three_prime_UTR 831 1095 . - . ID=g3342.t1.utr3p1;Parent=g3342.t1 #PROT g3342.t1 g3342 MASIAGATPDPRWAQVARGLRILYDEKADWHPEYVGFPHGNKWFGGLVKQADIVLMGYPLEWPLPGNSRINDILKYEEMYDENGPAMTWSMSAVGWLDHGNESNAHNRAGKTLRNLQPPFNVWTETPIPTVHPNDQGCYNFLTGAGGFTQLMVNGYAGLRVRKDGMYFRPTMPENSTRIVLRGIHYLGNVLSFDVDGSLNLTLTVVSQDNVLLCMAQLTEKLSTPWSQPVGSEAPWSDHVTLTPKVPVVLSAANGLRLFECP* # ORIGINAL: g7721.t1 original gene structure, not modified by PASA NODE_3511_length_3302_cov_40.7865 AUGUSTUS gene 511 2535 . + . ID=g7721;Name=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS mRNA 511 2535 . + . ID=g7721.t1;Parent=g7721;Name=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS exon 511 759 . + . ID=g7721.t1.exon1;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS CDS 511 759 . + 0 ID=cds.g7721.t1;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS exon 841 1117 . + . ID=g7721.t1.exon2;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS CDS 841 1117 . + 0 ID=cds.g7721.t1;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS exon 1368 1448 . + . ID=g7721.t1.exon3;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS CDS 1368 1448 . + 2 ID=cds.g7721.t1;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS exon 1576 1673 . + . ID=g7721.t1.exon4;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS CDS 1576 1673 . + 2 ID=cds.g7721.t1;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS exon 1810 2535 . + . ID=g7721.t1.exon5;Parent=g7721.t1 NODE_3511_length_3302_cov_40.7865 AUGUSTUS CDS 1810 2535 . + 0 ID=cds.g7721.t1;Parent=g7721.t1 #PROT g7721.t1 g7721 MDGGESKKDRQVDSYVNTYSKVQSVARVSAQHFLTPVGESGRKRKRALGLNQSSNSALDGSVTVASQASRAPTVHIDPSTLRMGVVQQRAGFEGPEAHPTADGHPQRGRRRKLLPLKRKMMDDSFDASGPTITGGTLGASTRPSVTQAAPRAPVHSLINDENGLETGDRRDAPKRATANRMFPARASANGDEELAAEALSSLASNFSFVGYDYDPHAPDWHDEESMDMCTPSPAACVPSTRLPCIPSANARSTPRDHRAPAAIPPVVKATSAHATDHTLSMSFAQSTGSARTGEPYSFLKFRRGAGHRFATSTPNAPFLGSDLNTSGVSDHLPLSSICAARTTGSSFVDSDSVAMSVHGSDKAQYDATDLSVALSSHASFGADASPVLAFGSPLELQFGVQRAGSFHTNSRVAVISRSFGGNEDAYNEMVEAERDVDELFRDWPDDTDMHPLAPIDMLVMHCEDALPPTADRAMPF* # ORIGINAL: g9973.t1 original gene structure, not modified by PASA NODE_1792_length_9229_cov_44.398 AUGUSTUS gene 86 9080 . - . ID=g9973;Name=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS mRNA 86 9080 . - . ID=g9973.t1;Parent=g9973;Name=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS exon 4240 9080 . - . ID=g9973.t1.exon1;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS CDS 4240 9080 . - 0 ID=cds.g9973.t1;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS exon 1468 4061 . - . ID=g9973.t1.exon2;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS CDS 1468 4061 . - 1 ID=cds.g9973.t1;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS exon 954 1321 . - . ID=g9973.t1.exon3;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS CDS 954 1321 . - 2 ID=cds.g9973.t1;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS exon 533 761 . - . ID=g9973.t1.exon4;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS CDS 533 761 . - 0 ID=cds.g9973.t1;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS exon 86 346 . - . ID=g9973.t1.exon5;Parent=g9973.t1 NODE_1792_length_9229_cov_44.398 AUGUSTUS CDS 86 346 . - 2 ID=cds.g9973.t1;Parent=g9973.t1 #PROT g9973.t1 g9973 MFVLPEISVGGVSINDLLGIGSSGVISTSADAVADGVADAVGSAKELVVQGRAEALKRAQELKQEVKARIRGYMPQTAADIASVSASIQDAMKGKVLFLRDAIKAIVPSFDTSVLDPKVAGLPDFGAFGLTDFESETGEPQANKPGFLPVFKRLQVSIIYGQPWKILPRGSIVLNNLGIMLGVKFGGVAGTQFYGRVCGSLAIRDFVFSARVPFNIPGERMEFILPEVKVFGRSISSLLGLDQPITVPDLTAIDVNATAAADAAREFATKAKADMVQSLRLAMPATVKEAEEFTAALSKSTSGSVLLMGDIVDALGIPGFTSSVLNPGVAGLPNFATFGLTDFELEFRETNSSGFGGIRRLAVTILATQPWKITSGLRVDGFGLMIGLASDRNEKLVFMGRVSGFVTIGSFTFAARIPFNIPGEQVEFILPEVTVFGQRVTDVLGLGQPLTVPPVTVTVSAGTPAQLAALQSRTKAAADELGEESKNLMRRLLPTTVVEARSLGAELTSATAGKVLLIGDAVDAFAFPGFSSRSLNPGVAGLPDFSKFGLTDFTVEFSNSNGTSFGGLKTLAVTVIATVPWTITGTLTVEQFGFAVRVDTDSYGKRSFSGRISGIIGVSKFYFGARVPFNVPGESAEFVLPIVTVGGVNVNDLLGLSQKITVPPLPTDGFDLDVVAARAKIAASRRLDDLKKDARQRLERLTEDAKGLAEALKAATNGKVLVVGDVVDALGISGFDSNSLNPGIASLPRFSTFGLTNFELEFFPPNPAPESGGTTTGFSGFKSMSVTVVATEPWVIRPKLKINGFGFTVIITTDSYGKRAFSGRIVGTLSITDKENEFFISIRFPFNIPGERAEFIMPLLQIDGVDINTQLGLADPAEDSPVADPVTILPGAPSDVLALLRADMQRDVDTAKNNSRVAVRSLLVGNLNNADAFRAKLETAMQKVLTLGAIVNALDIGITSDSLNFGNGLPALSSFGISQMSVVFNAPAANASFGSFQSFSVTILLTSEWKIIPGTDINLRYFGLAMRVEKDGFGVSVFKARVSGAIGIGQFTFGAVFPYNLPSEKLEFYLPRIVVAGIDINDAFGLPPSTNGASVSMSPPTLPRSASDAASELVRIAKVEAEAARRKVRALMPTAIAVVKQRAADLAAIAGSGKVLTIGAVVDSLNITGFTSANLKFGNGLPDLASFGLTDFSASLGVGSFVPQGLSATIVATAPWVITGKLSIEGFGFGMRMATTNGVRTFSAFIQGNIVFNTKVAGIRLPYNMPGEQATFVLPEVYVRGVNLNDVFSASASNPYVPSTPNDLANFAAALNASASQVLTLGDVIDSLQIDALRAVTTMNFFGLIPASFGLTEIDVRFTNGTYSGMTYLSATVVMTSPWKLIPGKLEIPFFGLNLMWDSTRATPFSARVLGAVQINGKMVGLDIPYNIPGVTTRFILPDVTVDGKSIEEIYESAATLSSAPTQEYIEAQTATALRLRDLLAVVPVSSPDFTQLDVPGLNNVLDIAVGLLVANFSSDYKQFNSFAVKLIATNRWNLVPPTGDAAGSKLNIPAFTLYFERLAGGALRGRVRGVIAINSKLVRLAVPFRMPGEVPRLYLPAVSVNGIGMGEVSSVSNLKAIAGVNKKELAAQVAPLLTVADCLALFSDVIDIPTELPFMPDLKGLAISKLQFDFADLSQRSQLSSFGVNIVSTIPWKIFGDAVSVNIDFFSFGVAFVTNAKQQKVFSGKLLATIAFPRAGFAPVLVYMSVPFGNRLSPDRMSASNPAFLEFPAANDPNGALTLDLFIRSFIPFTLPDLSSIGLGEILTKTAVTALAFAFEQDITSVTNKTVLTYFNFQLQSTQPWKFLGERLTFPTFSMQLAKFAGSSSFSGWINGSIAFTAESNTAIIELRCPIPITPTNPLQIILPDATDPKKSFKVIHMLSLVPEVQSAVMGLDFGESLNMGDILSMFVVSKCQIGWKYDAKNKLALDTFAFRLDMTTRWGFKLDTGAEFAVERGAMEFTYSTTPYVWGKDLEGKVMSTSFFGFIEGTTSLDGALVTMRAYFPMTAPNVPGITFILPDASSSAPLTIGRILNLLIGGGAAALGLNSQGIEIPLLDYFALTELSFKPVGSMSFMAMNLTIEMTEAWTFLNGRLSIASAKLRVRRYYNPADLTPQALKRTPKPAALNEGYAMGTVKIAGTSDITIRAPFPLFALPGGIYAGGRIELVIPETGVTLNPVALLGALEPSLGSFLSEDSIISDLLSVKVTNMGFYVVQGRMDAFRIAMRIENLKFLDGRLVVNYIAMDLNSTMVAVRDKRVRTYNGLIEGLALFKHPQSTPGAYDRRYDTIVSTKIPFPASAYANGALATLTTVDESGQPGAALTMTHAAFTMLNTDIRAFSIGIPGLETIFDIGITYLGFGLDSNGKLSTVQGNMTNQGVLRIGTVECLPRMLNISMDYSALSKTRPTTKVLRFRIVTRCTETTTNIKLNFDVSVPAKGSGATATKAPVIKSMTARFTRDFGDNFSLRSFVNVTVVFNRTESFSPGNNAYCLRCYLRTIEPTHDYYYYGQNPAVAGTPGVSGVPGTVATNYCFGERSSNNPLLAKEDDLETTRVEVLFDNSKNAKFVRCALAVRIPDSSDSTISISEKTVADNIKANPVNPSGKYYVTDYVKPTYINSNGVDLDDGGETRDNGDGNLFTPSSCQWKVFRPFVLPLDPKTQSVTLTVPLSGFSCPSSSFAVSQVDTQSQASMPGASGGSQKFVFRKGGIYEISYGPSASRKFVAEVFVT # ORIGINAL: g2298.t1 original gene structure, not modified by PASA NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS gene 2363 5315 . + . ID=g2298;Name=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS mRNA 2363 5315 . + . ID=g2298.t1;Parent=g2298;Name=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 2363 2649 . + . ID=g2298.t1.exon1;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 2363 2649 . + 0 ID=cds.g2298.t1;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 3003 3111 . + . ID=g2298.t1.exon2;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 3003 3111 . + 1 ID=cds.g2298.t1;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 3293 3454 . + . ID=g2298.t1.exon3;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 3293 3454 . + 0 ID=cds.g2298.t1;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 3883 3956 . + . ID=g2298.t1.exon4;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 3883 3956 . + 0 ID=cds.g2298.t1;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 4361 5315 . + . ID=g2298.t1.exon5;Parent=g2298.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 4361 5315 . + 1 ID=cds.g2298.t1;Parent=g2298.t1 #PROT g2298.t1 g2298 MSEDIIDHVNHKGMAVFSVIASVILFTCAGIFFYFSVRGTGFKYRTPHQMGQWAPEESNLSGMASSIAGLVWFGRAVVYIALANNNPIDFNIEKYRYYDYVISCPMLVLDICWVTRQPFKWTITLLTSFTLLIGAICVNVSRPETWAWFALGCVFFSILFYWLFSGLFRSVRSYPKHLRIYLKMAMYIFIIVWPFFPILYVIGPHITGTLSVETDTYLHGFLDICAKGLYGAFLCRFRLGLEDVHNAEILGISYKTTSDDRESVAGSVAVPMGRPQGISRTNTVTLADGGPSTTAMGGLMHQSTGAHAQMQDAYAAVERDFNGNGSTPMYNMQTGYGNPRFPVTAQSMGQSMSQIFRYIPDDTESNLGFGGIAPQPAEMAGLQQRNQRQQLLQQQQQQQLLQQQQLLQQQNQQQYLLLQRQQQLQMQQPSPSASTIHNLTTTAAVPVVEQFATTAGGPASMQPAYFGTLGQAGAGLPTDNAAPPGQPARTEDLVALLQNFGALVNGILDGLNVAQPPPPPQQSATPSA* # ORIGINAL: g2299.t1 original gene structure, not modified by PASA NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS gene 5997 6624 . - . ID=g2299;Name=g2299.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS mRNA 5997 6624 . - . ID=g2299.t1;Parent=g2299;Name=g2299.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 6230 6624 . - . ID=g2299.t1.exon1;Parent=g2299.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 6230 6624 . - 0 ID=cds.g2299.t1;Parent=g2299.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS exon 5997 6057 . - . ID=g2299.t1.exon2;Parent=g2299.t1 NODE_1702_length_9606_cov_44.9649_potentialcontaminant AUGUSTUS CDS 5997 6057 . - 1 ID=cds.g2299.t1;Parent=g2299.t1 #PROT g2299.t1 g2299 MTDELYGCSDWTQDVARSTLSFEQASDRQMHPQGMAMSREYGDHSNAHATAADGADACGAHWDSRIMHPASHLAGGGVCAGQAPASESALLSSRENAVELNTDVEMGLNPNSDAAASFLEGNPDRRLERELRDTAEAARRLDRDRRHLEFS* # PASA_UPDATE: g4743.t1, single gene model update, valid-1, status:[pasa:asmbl_9981,status:12], valid-1 NODE_915_length_15908_cov_41.5915 . gene 10933 15075 . + . ID=g4743;Name=g4743.t1 NODE_915_length_15908_cov_41.5915 . mRNA 10933 15075 . + . ID=g4743.t1;Parent=g4743;Name=g4743.t1 NODE_915_length_15908_cov_41.5915 . exon 10933 12348 . + . ID=g4743.t1.exon1;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . CDS 10933 12348 . + 0 ID=cds.g4743.t1;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . exon 12577 12751 . + . ID=g4743.t1.exon2;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . CDS 12577 12751 . + 0 ID=cds.g4743.t1;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . exon 12969 13450 . + . ID=g4743.t1.exon3;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . CDS 12969 13450 . + 2 ID=cds.g4743.t1;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . exon 13701 15075 . + . ID=g4743.t1.exon4;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . CDS 13701 14747 . + 0 ID=cds.g4743.t1;Parent=g4743.t1 NODE_915_length_15908_cov_41.5915 . three_prime_UTR 14748 15075 . + . ID=g4743.t1.utr3p1;Parent=g4743.t1 #PROT g4743.t1 g4743 MSDEETDGPPAPAQPRNKLTTVMSFVSAMGSLKRISSDEGMTRTESASDAGSSLATANATGGAALPLRRKMSFMAKVSTGGAGPGEEGMHELRRTNSTNEFLKKFSRNSMSAKETSTTPLVGAVNIVRGLKKWSKRRTRSIAPLSTDTSMAALGVPSGGGAVDPPANSGGLGGGLGARDAEEEEDEDEEDDGPMPPIVIPHDSTFLLNWLWIVALFIYYNLYIIIFRIAFYEVNTDNKAAFATLDYLCDAVYALDILVRMRTGYLEGGVMVVDPAKLRQNYMVNNRMSFYLDLASLMPLDFLYIGYGFKAVFRLPRLIKSHRLGAFYFRVEAQTNYPFVWRISRVVVNILLTIHWIACFYWLLSESEGFGTNRWVYPKPLYEFAPLRRKYIFSLYWATLVLTTIGDQPTPVTNYEYCFTLMTYIMGVFVFATVVGNIGNMISNMNATQEEFKSKMDAIKQYMHYRGVDEDLQKRVKRWYDYTWQQQHVLDETLLLRMLPDNLRADIALHVNLNVLKKVPIFKDCEPGFFRDLVLQLKPQIFSPGDYVCRKGEIGRDMYIINHGKVEVVSDDGKTVFATLQEGSYFGEISVLSLGNSNRRTAHVRSVGFSDLFQLSKADLHETLKDYPEARGMLAERAQKLLSKDSSRQTAPTTATLRRDSRTGKYIDQDADSVPPSPSQSRRGSTMDGDVQTPDAQPAHTSNSDLRRQVLERSQTLHTVGAQIDWERQVSSLVRSLPPSVGLADVIQRVCADFTAFRPQIQRGSVTYGSQDSLDIMSPPPERSVSVVRTHEQQQQQQQLQRQLQAVAAGVGVGASSAMPESILAEESEVSATSSTALVTASSNTAPQPPRRGSGSSGQFSKMPTLVSQSSDNMETDKLEAEILGEGVTESVRSPPTVHGAAPTHAQDSHSAGLVSSSSSHGSWTATTAPIEERRLSVSAGASIAPFLHLQQQQHSDPNPDGSYPPPSPRRMSGWSGIRRPSVAAGHDDETDSSPAGGTPKFTRSPAPHKLPPLEDAHKASTVAREDDVGTVVVEVERDV* # ORIGINAL: g4741.t1 original gene structure, not modified by PASA NODE_915_length_15908_cov_41.5915 AUGUSTUS gene 154 2461 . - . ID=g4741;Name=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS mRNA 154 2461 . - . ID=g4741.t1;Parent=g4741;Name=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 2446 2461 . - . ID=g4741.t1.exon1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 2446 2461 . - 0 ID=cds.g4741.t1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 1919 2236 . - . ID=g4741.t1.exon2;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 1919 2236 . - 2 ID=cds.g4741.t1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 1442 1626 . - . ID=g4741.t1.exon3;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 1442 1626 . - 2 ID=cds.g4741.t1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 1032 1178 . - . ID=g4741.t1.exon4;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 1032 1178 . - 0 ID=cds.g4741.t1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 628 860 . - . ID=g4741.t1.exon5;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 628 860 . - 0 ID=cds.g4741.t1;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS exon 154 233 . - . ID=g4741.t1.exon6;Parent=g4741.t1 NODE_915_length_15908_cov_41.5915 AUGUSTUS CDS 154 233 . - 1 ID=cds.g4741.t1;Parent=g4741.t1 #PROT g4741.t1 g4741 MTNKTDIDHVLDVLSLSGKGGVDAAATRDFLSRDDVRAAYKAVQMLPTESQPTTMGGAAVINEVIAALGQFAGEDAEKAAELKAILQGALLSVAVSVHDRLASQRSLDNHAASSAAATVVTSANGDQLISVRIDKGDAPLGATITEKDGKVVVARIIHGSVAQRSGQIHVDDEVVEVNGESTAKMSPDDIVAAVRKSGRGPVLFKLQRAAAAVARIEETGDAPFHVRALFDYDPSTDDLIPCKEAGVRFRRGDVLHVLNTADQYWWQVKKVGSDAVGLAPSLSLEDRRQRALQLSEASSGSKKEKRKSFVDRFSIRRKSVNKAMKQ # PASA_UPDATE: g4742.t1, single gene model update, valid-1, status:[pasa:asmbl_9977,status:3], valid-1 # PASA_UPDATE: g4742.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9979,status:12], valid-1 # PASA_UPDATE: g4742.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9978,status:12], valid-1 NODE_915_length_15908_cov_41.5915 . gene 3682 9992 . + . ID=g4742;Name=g4742.t1 NODE_915_length_15908_cov_41.5915 . mRNA 3682 9992 . + . ID=g4742.t1;Parent=g4742;Name=g4742.t1 NODE_915_length_15908_cov_41.5915 . five_prime_UTR 3682 3712 . + . ID=g4742.t1.utr5p1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . five_prime_UTR 3879 3916 . + . ID=g4742.t1.utr5p2;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 3682 3712 . + . ID=g4742.t1.exon1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 3879 3953 . + . ID=g4742.t1.exon2;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 3917 3953 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 4155 4396 . + . ID=g4742.t1.exon3;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 4155 4396 . + 2 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 4640 4753 . + . ID=g4742.t1.exon4;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 4640 4753 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 5042 5173 . + . ID=g4742.t1.exon5;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 5042 5173 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 5429 5556 . + . ID=g4742.t1.exon6;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 5429 5556 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 5781 5916 . + . ID=g4742.t1.exon7;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 5781 5916 . + 1 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 6164 6242 . + . ID=g4742.t1.exon8;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 6164 6242 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 6414 6627 . + . ID=g4742.t1.exon9;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 6414 6627 . + 2 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 6838 7003 . + . ID=g4742.t1.exon10;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 6838 7003 . + 1 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 7221 7412 . + . ID=g4742.t1.exon11;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 7221 7412 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 7632 7808 . + . ID=g4742.t1.exon12;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 7632 7808 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 8081 8268 . + . ID=g4742.t1.exon13;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 8081 8268 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 8488 9484 . + . ID=g4742.t1.exon14;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 8488 9484 . + 1 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . exon 9697 9992 . + . ID=g4742.t1.exon15;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . CDS 9697 9855 . + 0 ID=cds.g4742.t1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . three_prime_UTR 9856 9992 . + . ID=g4742.t1.utr3p1;Parent=g4742.t1 NODE_915_length_15908_cov_41.5915 . mRNA 3719 9992 . + . ID=g4742.t1.1.5b6be70c;Parent=g4742;Name=g4742.t1 NODE_915_length_15908_cov_41.5915 . five_prime_UTR 3719 3916 . + . ID=g4742.t1.1.5b6be70c.utr5p1;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 3719 3953 . + . ID=g4742.t1.1.5b6be70c.exon1;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 3917 3953 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 4155 4396 . + . ID=g4742.t1.1.5b6be70c.exon2;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 4155 4396 . + 2 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 4640 4753 . + . ID=g4742.t1.1.5b6be70c.exon3;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 4640 4753 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5042 5173 . + . ID=g4742.t1.1.5b6be70c.exon4;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5042 5173 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5429 5556 . + . ID=g4742.t1.1.5b6be70c.exon5;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5429 5556 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5781 5916 . + . ID=g4742.t1.1.5b6be70c.exon6;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5781 5916 . + 1 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6164 6242 . + . ID=g4742.t1.1.5b6be70c.exon7;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6164 6242 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6414 6627 . + . ID=g4742.t1.1.5b6be70c.exon8;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6414 6627 . + 2 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6838 7003 . + . ID=g4742.t1.1.5b6be70c.exon9;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6838 7003 . + 1 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 7221 7412 . + . ID=g4742.t1.1.5b6be70c.exon10;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 7221 7412 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 7632 7808 . + . ID=g4742.t1.1.5b6be70c.exon11;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 7632 7808 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 8081 8268 . + . ID=g4742.t1.1.5b6be70c.exon12;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 8081 8268 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 8488 9484 . + . ID=g4742.t1.1.5b6be70c.exon13;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 8488 9484 . + 1 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 9697 9992 . + . ID=g4742.t1.1.5b6be70c.exon14;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 9697 9855 . + 0 ID=cds.g4742.t1.1.5b6be70c;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . three_prime_UTR 9856 9992 . + . ID=g4742.t1.1.5b6be70c.utr3p1;Parent=g4742.t1.1.5b6be70c NODE_915_length_15908_cov_41.5915 . mRNA 3719 9992 . + . ID=g4742.t1.2.5b6be70c;Parent=g4742;Name=g4742.t1 NODE_915_length_15908_cov_41.5915 . five_prime_UTR 3719 4237 . + . ID=g4742.t1.2.5b6be70c.utr5p1;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 3719 4396 . + . ID=g4742.t1.2.5b6be70c.exon1;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 4238 4396 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 4640 4753 . + . ID=g4742.t1.2.5b6be70c.exon2;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 4640 4753 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5042 5173 . + . ID=g4742.t1.2.5b6be70c.exon3;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5042 5173 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5429 5556 . + . ID=g4742.t1.2.5b6be70c.exon4;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5429 5556 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 5781 5916 . + . ID=g4742.t1.2.5b6be70c.exon5;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 5781 5916 . + 1 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6164 6242 . + . ID=g4742.t1.2.5b6be70c.exon6;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6164 6242 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6414 6627 . + . ID=g4742.t1.2.5b6be70c.exon7;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6414 6627 . + 2 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 6838 7003 . + . ID=g4742.t1.2.5b6be70c.exon8;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 6838 7003 . + 1 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 7221 7412 . + . ID=g4742.t1.2.5b6be70c.exon9;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 7221 7412 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 7632 7808 . + . ID=g4742.t1.2.5b6be70c.exon10;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 7632 7808 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 8081 8268 . + . ID=g4742.t1.2.5b6be70c.exon11;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 8081 8268 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 8488 9484 . + . ID=g4742.t1.2.5b6be70c.exon12;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 8488 9484 . + 1 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . exon 9697 9992 . + . ID=g4742.t1.2.5b6be70c.exon13;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . CDS 9697 9855 . + 0 ID=cds.g4742.t1.2.5b6be70c;Parent=g4742.t1.2.5b6be70c NODE_915_length_15908_cov_41.5915 . three_prime_UTR 9856 9992 . + . ID=g4742.t1.2.5b6be70c.utr3p1;Parent=g4742.t1.2.5b6be70c #PROT g4742.t1 g4742 MSDSKYFTTTKKGEIYELKAELNSDKKDKKKEAVKKVIASMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDLAILAVNTFVKDCVNPNPLIRALAVRTMGCIRVDKITEYLCDPLRKCLKDEDPYVRKTAAVCVAKLYDIDPSLTSAQGFLDELRDLLSDSNPMVVANAVASLSEINETAAASGEQVFLVNQATLNKLLTALNECTEWGQVFILDSLAQYVPTDSREAQSICERVSPRLSHANAAVVLSAVKVLMKYLEVIDDAAFVATMTKKLAPPLVTLLSAEPEIQYVALRNISIIVQKRPEILRQETKVFFVKYNDPIYVKLEKLDIMIRLAADHNIAQVLAELKEYATEVDVDFVRKSVRAIGRCAIKIESAAERCIQTLLELIQTKVNYVVQEAIVVIKDIFRKYPNRYETIIGTLCENLDTLDEPEAKAAIIWIIGEYAERIENADELLTSFLDNFQDENTQVQLQLLTAIVKLFLKSPGNTQELVQKVLQLATQESDNPDLRDRGYIYWRLLSTDPAAAKAVVLSEKPLIADETDMLERSLLDELIGQISTLASVYHKPPSTFVEGKTPGRRPAFQRPTTAEGDNEDEPETSAAQAAAALQSLGLGGAGGAAPGGAYSGAAAQRSPDNLLDLDIMGFGAPAPTPVQQHQQQQQSLGGYGGYGVPAQTAAPVQSLDPLDLLGDIPPVSAQRSAAPAASGLGFGVGPQAGAFGGVSGGAPAGGLADLFGVGGAVAAANAYVPTKTVWLPAAKGKGLEIAGTFSRRQGQLYMDMTFTNKAMQPMNNFAVQFNKNSFAVAAGGALQLALLPANQSGDTSLPLALNGPVQKMEPITALQVAIRNNIDVFYFTAVMPIHIFFTEDGKIERNAFMSTWQEIPEANERRFTVNGVKQSTSDGIESRLLANNVFTVAKRNIDGADFLYQSVKFTNGLWVLLELSFRAGSGTANLSIKSRSTEVANDIYQVVESILH* #PROT g4742.t1.1.5b6be70c g4742 MSDSKYFTTTKKGEIYELKAELNSDKKDKKKEAVKKVIASMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDLAILAVNTFVKDCVNPNPLIRALAVRTMGCIRVDKITEYLCDPLRKCLKDEDPYVRKTAAVCVAKLYDIDPSLTSAQGFLDELRDLLSDSNPMVVANAVASLSEINETAAASGEQVFLVNQATLNKLLTALNECTEWGQVFILDSLAQYVPTDSREAQSICERVSPRLSHANAAVVLSAVKVLMKYLEVIDDAAFVATMTKKLAPPLVTLLSAEPEIQYVALRNISIIVQKRPEILRQETKVFFVKYNDPIYVKLEKLDIMIRLAADHNIAQVLAELKEYATEVDVDFVRKSVRAIGRCAIKIESAAERCIQTLLELIQTKVNYVVQEAIVVIKDIFRKYPNRYETIIGTLCENLDTLDEPEAKAAIIWIIGEYAERIENADELLTSFLDNFQDENTQVQLQLLTAIVKLFLKSPGNTQELVQKVLQLATQESDNPDLRDRGYIYWRLLSTDPAAAKAVVLSEKPLIADETDMLERSLLDELIGQISTLASVYHKPPSTFVEGKTPGRRPAFQRPTTAEGDNEDEPETSAAQAAAALQSLGLGGAGGAAPGGAYSGAAAQRSPDNLLDLDIMGFGAPAPTPVQQHQQQQQSLGGYGGYGVPAQTAAPVQSLDPLDLLGDIPPVSAQRSAAPAASGLGFGVGPQAGAFGGVSGGAPAGGLADLFGVGGAVAAANAYVPTKTVWLPAAKGKGLEIAGTFSRRQGQLYMDMTFTNKAMQPMNNFAVQFNKNSFAVAAGGALQLALLPANQSGDTSLPLALNGPVQKMEPITALQVAIRNNIDVFYFTAVMPIHIFFTEDGKIERNAFMSTWQEIPEANERRFTVNGVKQSTSDGIESRLLANNVFTVAKRNIDGADFLYQSVKFTNGLWVLLELSFRAGSGTANLSIKSRSTEVANDIYQVVESILH* #PROT g4742.t1.2.5b6be70c g4742 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDLAILAVNTFVKDCVNPNPLIRALAVRTMGCIRVDKITEYLCDPLRKCLKDEDPYVRKTAAVCVAKLYDIDPSLTSAQGFLDELRDLLSDSNPMVVANAVASLSEINETAAASGEQVFLVNQATLNKLLTALNECTEWGQVFILDSLAQYVPTDSREAQSICERVSPRLSHANAAVVLSAVKVLMKYLEVIDDAAFVATMTKKLAPPLVTLLSAEPEIQYVALRNISIIVQKRPEILRQETKVFFVKYNDPIYVKLEKLDIMIRLAADHNIAQVLAELKEYATEVDVDFVRKSVRAIGRCAIKIESAAERCIQTLLELIQTKVNYVVQEAIVVIKDIFRKYPNRYETIIGTLCENLDTLDEPEAKAAIIWIIGEYAERIENADELLTSFLDNFQDENTQVQLQLLTAIVKLFLKSPGNTQELVQKVLQLATQESDNPDLRDRGYIYWRLLSTDPAAAKAVVLSEKPLIADETDMLERSLLDELIGQISTLASVYHKPPSTFVEGKTPGRRPAFQRPTTAEGDNEDEPETSAAQAAAALQSLGLGGAGGAAPGGAYSGAAAQRSPDNLLDLDIMGFGAPAPTPVQQHQQQQQSLGGYGGYGVPAQTAAPVQSLDPLDLLGDIPPVSAQRSAAPAASGLGFGVGPQAGAFGGVSGGAPAGGLADLFGVGGAVAAANAYVPTKTVWLPAAKGKGLEIAGTFSRRQGQLYMDMTFTNKAMQPMNNFAVQFNKNSFAVAAGGALQLALLPANQSGDTSLPLALNGPVQKMEPITALQVAIRNNIDVFYFTAVMPIHIFFTEDGKIERNAFMSTWQEIPEANERRFTVNGVKQSTSDGIESRLLANNVFTVAKRNIDGADFLYQSVKFTNGLWVLLELSFRAGSGTANLSIKSRSTEVANDIYQVVESILH* # PASA_UPDATE: g14061.t1, single gene model update, valid-1, status:[pasa:asmbl_1233,status:12],[pasa:asmbl_1234,status:12], valid-1 NODE_1333_length_12028_cov_40.9626 . gene 2139 5433 . - . ID=g14061;Name=g14061.t1 NODE_1333_length_12028_cov_40.9626 . mRNA 2139 5433 . - . ID=g14061.t1;Parent=g14061;Name=g14061.t1 NODE_1333_length_12028_cov_40.9626 . five_prime_UTR 5336 5433 . - . ID=g14061.t1.utr5p1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 5243 5433 . - . ID=g14061.t1.exon1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 5243 5335 . - 0 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 5061 5101 . - . ID=g14061.t1.exon2;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 5061 5101 . - 0 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 3531 4969 . - . ID=g14061.t1.exon3;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 3531 4969 . - 1 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 3249 3316 . - . ID=g14061.t1.exon4;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 3249 3316 . - 2 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 3030 3152 . - . ID=g14061.t1.exon5;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 3030 3152 . - 0 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . exon 2139 2526 . - . ID=g14061.t1.exon6;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . CDS 2245 2526 . - 0 ID=cds.g14061.t1;Parent=g14061.t1 NODE_1333_length_12028_cov_40.9626 . three_prime_UTR 2139 2244 . - . ID=g14061.t1.utr3p1;Parent=g14061.t1 #PROT g14061.t1 g14061 MSQHGFNNLSDEIVLRIFAYLGARDLCRNAQVSVPWYRLANDPFLWKQLFLSRFGDAGTDRSGPLLGGGLRRRKWRELYAVYSNWRRCRCDCFEVAAPAHAPTPPTDEARVARNQDIVAGVHIGGGSHHGCGDSFALRAPGCVAALELSSGGAFLAAVYRDRPFVRVWNFQRESTPLDSAGDRAPLTPTSLAPIGHLSAVTNDRRTTTPTTPSMPTTPSMPTTPTPFVVPSVTSSVGAATATADDGHVDVACPAQPRCLTFGSGHSRDVLAVGMEGGLCALWSLGGARIFCACAFATEGDDAAVSSIRTREGAVVTLSEGGHVRVWMIKGASPSLSVVCVRVLRSCGSDSPALWDVAVSRVRRPWYAPSESPAASHSPTDSPTPATSGHVSNHVLLGGRSSWAVGVSRVATLSGAVTGRRRKRDWDADAPPPPPATHIIGLQTLTVDSSGAVAWERNPLRELGVPGEVWLSTAAETSGRTRVLCIASDARGGSARRVAWGLSDNSIGVWDASLGTGVAMLYGHMGAVTCLRFERERIISGSADRSIKIWSLPSGLCEHTIPFAHGCALSTVAFDERRIVTGDVEGGIKVWDFGARTSAALSYGGGFTPRRYLQRQLQQLQPNCEAHGVWRGSHPRHVGVHPASTVAGGTASCNDALDASLQATAVFSAGNASQGRKRRLSE* # PASA_UPDATE: g14060.t1, single gene model update, valid-1, status:[pasa:asmbl_1235,status:12], valid-1 NODE_1333_length_12028_cov_40.9626 . gene 202 2141 . + . ID=g14060;Name=g14060.t1 NODE_1333_length_12028_cov_40.9626 . mRNA 202 2141 . + . ID=g14060.t1;Parent=g14060;Name=g14060.t1 NODE_1333_length_12028_cov_40.9626 . five_prime_UTR 202 202 . + . ID=g14060.t1.utr5p1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . exon 202 271 . + . ID=g14060.t1.exon1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 203 271 . + 0 ID=cds.g14060.t1;Parent=g14060.t1;5_prime_partial=true NODE_1333_length_12028_cov_40.9626 . exon 444 635 . + . ID=g14060.t1.exon2;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 444 635 . + 0 ID=cds.g14060.t1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . exon 951 1156 . + . ID=g14060.t1.exon3;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 951 1156 . + 0 ID=cds.g14060.t1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . exon 1316 1471 . + . ID=g14060.t1.exon4;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 1316 1471 . + 1 ID=cds.g14060.t1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . exon 1714 1792 . + . ID=g14060.t1.exon5;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 1714 1792 . + 1 ID=cds.g14060.t1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . exon 1954 2141 . + . ID=g14060.t1.exon6;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . CDS 1954 2004 . + 0 ID=cds.g14060.t1;Parent=g14060.t1 NODE_1333_length_12028_cov_40.9626 . three_prime_UTR 2005 2141 . + . ID=g14060.t1.utr3p1;Parent=g14060.t1 #PROT g14060.t1 g14060 IYVLRMVNLYVLLYSLYAKVKSETFNECALTFVGQEFYRLVLIDIIVQSISQLVVKFGYYWWSKKKKREFDISQGVLSIVYRQALIWTGASACPILPFIGCLSNANFFFLYYLIVDKTCRPPMKRWNQSRNSAFFFGILGITLVCTLIPVTLVLTSYKHACGPYADAKYDDAYDAFSEYIKEQPKGLRVAIQYIASPAVVGPMVCVLCVTIYFMHIRVKREKSKQEELQQQLEQERLDKKYILELYGASV* # PASA_UPDATE: g14062.t1, single gene model update, valid-1, status:[pasa:asmbl_1236,status:3], valid-1 NODE_1333_length_12028_cov_40.9626 . gene 5826 8780 . + . ID=g14062;Name=g14062.t1 NODE_1333_length_12028_cov_40.9626 . mRNA 5826 8780 . + . ID=g14062.t1;Parent=g14062;Name=g14062.t1 NODE_1333_length_12028_cov_40.9626 . five_prime_UTR 5826 5975 . + . ID=g14062.t1.utr5p1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 5826 6207 . + . ID=g14062.t1.exon1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 5976 6207 . + 0 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 6307 6404 . + . ID=g14062.t1.exon2;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 6307 6404 . + 2 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 6515 6609 . + . ID=g14062.t1.exon3;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 6515 6609 . + 0 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 6780 6909 . + . ID=g14062.t1.exon4;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 6780 6909 . + 1 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 7280 7506 . + . ID=g14062.t1.exon5;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 7280 7506 . + 0 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 7797 8049 . + . ID=g14062.t1.exon6;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 7797 8049 . + 1 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 8260 8370 . + . ID=g14062.t1.exon7;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 8260 8370 . + 0 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . exon 8492 8780 . + . ID=g14062.t1.exon8;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . CDS 8492 8632 . + 0 ID=cds.g14062.t1;Parent=g14062.t1 NODE_1333_length_12028_cov_40.9626 . three_prime_UTR 8633 8780 . + . ID=g14062.t1.utr3p1;Parent=g14062.t1 #PROT g14062.t1 g14062 MATAVARKVDPMPKAATQTTPSVEFAHSRPSTTVAEKSKDGLRQYYLTKIQELQVIVNEKAQNLRRLEAQRNELNSKVRMLREELQLLQEPGSYVGEVVKAMGKKKVLVKVHPEGKYVVDIDKNIDITQITPNLRVALRNDSYVLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRSEGRNGGDSEVQRTMLELLNQLDGFEPTKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPTEIARLDILKIHSRKMNLTRGINLRKIAELAPGASGAEMKGICTEAGMYALRERRVHVTQEDFEMAVAKIMQKDSEKNMSLKKLWK* # PASA_UPDATE: g14063.t1, single gene model update, valid-1, status:[pasa:asmbl_1237,status:12],[pasa:asmbl_1238,status:12], valid-1 NODE_1333_length_12028_cov_40.9626 . gene 9269 11850 . + . ID=g14063;Name=g14063.t1 NODE_1333_length_12028_cov_40.9626 . mRNA 9269 11850 . + . ID=g14063.t1;Parent=g14063;Name=g14063.t1 NODE_1333_length_12028_cov_40.9626 . five_prime_UTR 9269 9512 . + . ID=g14063.t1.utr5p1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 9269 9529 . + . ID=g14063.t1.exon1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 9513 9529 . + 0 ID=cds.g14063.t1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 9772 9847 . + . ID=g14063.t1.exon2;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 9772 9847 . + 1 ID=cds.g14063.t1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 10045 10113 . + . ID=g14063.t1.exon3;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 10045 10113 . + 0 ID=cds.g14063.t1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 10387 11067 . + . ID=g14063.t1.exon4;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 10387 11067 . + 0 ID=cds.g14063.t1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 11241 11493 . + . ID=g14063.t1.exon5;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 11241 11493 . + 0 ID=cds.g14063.t1;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . exon 11715 11850 . + . ID=g14063.t1.exon6;Parent=g14063.t1 NODE_1333_length_12028_cov_40.9626 . CDS 11715 11850 . + 2 ID=cds.g14063.t1;Parent=g14063.t1;3_prime_partial=true #PROT g14063.t1 g14063 MSLLTSILPAPSQRPLYEEEDDDDDLEKAFQETQSKKGPPPYGKRRTFIPRTEEDFGDGGAFPEIAVAQYPLGMGRKKSAGPGGNSGTVALSTDSQGRVQYDAVIKQGLGRDRVVHSRVDALVPADRVSQEEKGLLQRPDDDAVAATTAETKAALERIVQTKIAAAVPAKAAEKQGPAQYIRYTPAQQGEAFNSGAQQRIIRMVEMPKDPMEPPKFKNTKKVPKGPGSPPAPVMHSPPRKLTQKEQDDWKIPPCISNWKNPKGYTIPLDKRLCADGRGLQEVQINDNFAKLAEALQIADRKAREAVEARGQIQKALAQKEKERKEESLRELAARAREERAGIARPAQAAPPAVQGQGLSSVPSTGAVAMGGRGARDASEPSDESEEAGGDDARERDEIREERRRDRERER # ORIGINAL: g11495.t1 original gene structure, not modified by PASA NODE_3129_length_4245_cov_37.8976 AUGUSTUS gene 105 3634 . + . ID=g11495;Name=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS mRNA 105 3634 . + . ID=g11495.t1;Parent=g11495;Name=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 105 929 . + . ID=g11495.t1.exon1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 105 929 . + 0 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 1141 1627 . + . ID=g11495.t1.exon2;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 1141 1627 . + 0 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 1848 1962 . + . ID=g11495.t1.exon3;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 1848 1962 . + 2 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 2298 2378 . + . ID=g11495.t1.exon4;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 2298 2378 . + 1 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 2525 2600 . + . ID=g11495.t1.exon5;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 2525 2600 . + 1 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 3028 3205 . + . ID=g11495.t1.exon6;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 3028 3205 . + 0 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 3353 3438 . + . ID=g11495.t1.exon7;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 3353 3438 . + 2 ID=cds.g11495.t1;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS exon 3587 3634 . + . ID=g11495.t1.exon8;Parent=g11495.t1 NODE_3129_length_4245_cov_37.8976 AUGUSTUS CDS 3587 3634 . + 0 ID=cds.g11495.t1;Parent=g11495.t1 #PROT g11495.t1 g11495 SVCQGRYVLADRRGFGTSAVVYVGVSAASGEKFAVKIMRKQRRGHGNAAAARALERMQREIDILRGLPAHAHVVSIRDVLESEQSVYVVMDLAQQDLLSYISWWMDRGRTCPELVCRLIAWQLVNGISFLHSRDIVHRDLKPENILVDVGRAFPEMRARITDFGLSREAMGAAILDTMCGTPAYVAPEVIRREGYGRAVDVWSLGVVVYTMVSGYNPWDPDAPLDQQILGGKCEFPDELFADKSPHVVDIIRLMLDVNHKTRLNIDSARQHPWFTTDDNLPAAIAGSSRFIHACMAQSGLVAGQLVQCAPAPDALSDDAPVVAVSESHVATQGNAGVFAPAGPVSRETATAPSAALVALSSSSGAAAIVAYGASGGAGAGAGAGGGPLVASPPIQHPSHAPVVGYGFGYGFGRYNQSAVRRSAVERPSPFEIYASTAEYAGDHERFRASIAEVTHFTKAAHRMFEEYSELLALLTGLIFIANDLGQKLQQHAALAEGVVGANRKSLEDAHVTVQLRLLEMRQFAQIAKTDRVVPWRTIASDRGRRFWSCSFGDRLCVPMDEFVPRMERMCDNGRFSARIRDDIASYIDSSLDGIVSCVEFGNFLVWASPWEGCIMTRDCVVVRPLKPALTP* # PASA_UPDATE: g8845.t1, single gene model update, valid-1, status:[pasa:asmbl_6642,status:12], valid-1 NODE_3846_length_2635_cov_102.044 . gene 1258 2598 . - . ID=g8845;Name=g8845.t1 NODE_3846_length_2635_cov_102.044 . mRNA 1258 2598 . - . ID=g8845.t1;Parent=g8845;Name=g8845.t1 NODE_3846_length_2635_cov_102.044 . five_prime_UTR 2565 2598 . - . ID=g8845.t1.utr5p1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . exon 2473 2598 . - . ID=g8845.t1.exon1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . CDS 2473 2564 . - 0 ID=cds.g8845.t1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . exon 2170 2247 . - . ID=g8845.t1.exon2;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . CDS 2170 2247 . - 1 ID=cds.g8845.t1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . exon 1774 1990 . - . ID=g8845.t1.exon3;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . CDS 1774 1990 . - 1 ID=cds.g8845.t1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . exon 1258 1561 . - . ID=g8845.t1.exon4;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . CDS 1418 1561 . - 0 ID=cds.g8845.t1;Parent=g8845.t1 NODE_3846_length_2635_cov_102.044 . three_prime_UTR 1258 1417 . - . ID=g8845.t1.utr3p1;Parent=g8845.t1 #PROT g8845.t1 g8845 MDIRNELKANKLYWHKHDINGRPCMIFKVARHHVQKRDKYETLRHWIYMVQDFMERRALNPRQQFVFLYDRSESTRLNSDVPMLQKFVRMFQQNYPETMHCMYVLQADFVFKYGYSIVKRFASKAFRRKIRLLGDDWRDHIRDHFTPDCLQIEYGGTSNSIYTYDENDLDTVQTGV* # PASA_UPDATE: g8844.t1, single gene model update, valid-1, status:[pasa:asmbl_6643,status:12], valid-1 NODE_3846_length_2635_cov_102.044 . gene 1 279 . - . ID=g8844;Name=g8844.t1 NODE_3846_length_2635_cov_102.044 . mRNA 1 279 . - . ID=g8844.t1;Parent=g8844;Name=g8844.t1 NODE_3846_length_2635_cov_102.044 . five_prime_UTR 232 279 . - . ID=g8844.t1.utr5p1;Parent=g8844.t1 NODE_3846_length_2635_cov_102.044 . exon 1 279 . - . ID=g8844.t1.exon1;Parent=g8844.t1 NODE_3846_length_2635_cov_102.044 . CDS 1 231 . - 0 ID=cds.g8844.t1;Parent=g8844.t1;3_prime_partial=true #PROT g8844.t1 g8844 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV # ORIGINAL: g3413.t1 original gene structure, not modified by PASA NODE_3883_length_2574_cov_38.3005 AUGUSTUS gene 1098 2363 . + . ID=g3413;Name=g3413.t1 NODE_3883_length_2574_cov_38.3005 AUGUSTUS mRNA 1098 2363 . + . ID=g3413.t1;Parent=g3413;Name=g3413.t1 NODE_3883_length_2574_cov_38.3005 AUGUSTUS exon 1098 2363 . + . ID=g3413.t1.exon1;Parent=g3413.t1 NODE_3883_length_2574_cov_38.3005 AUGUSTUS CDS 1098 2363 . + 0 ID=cds.g3413.t1;Parent=g3413.t1 #PROT g3413.t1 g3413 MCKEDNESYIFVLSPYTRDAFPENDSFSKSHTSDSDIEFVFVERPSALFIPATMTPPFLTDCNADSVSSASTAVAVTAPPNTPIDAIPVQASPSSFQKSSISHTRKRTKFVPLPKEFASFTVGSYVPSAAIDDDDTFWSTTPERDEPHWDMVETGEDAALFEFADDADAQIAQGRRCITCPSLARPNRADKRGLRPTHRSQVKRARQSSRHVIRGRRVRVKAPDTSVGRIRAWRKHAILSTNGADKMRSAELPFRVAMPTSRSRPLLAVPARVYAIPPWQQPPGWLGLDGEEWSSSRSGSRRRGRRFGPRRKTVGITTAQDELDVLLLQLQYRELSPADYELLLRLEERVKPKTVPRETLNTFPVVQATDGGICAVCLEEYREGANLTELPCGHRFHTGCITTWLSGSSRNCPADNLPVID* # ORIGINAL: g2435.t1 original gene structure, not modified by PASA NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS gene 12338 14313 . - . ID=g2435;Name=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS mRNA 12338 14313 . - . ID=g2435.t1;Parent=g2435;Name=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 14079 14313 . - . ID=g2435.t1.exon1;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 14079 14313 . - 0 ID=cds.g2435.t1;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 13577 13688 . - . ID=g2435.t1.exon2;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 13577 13688 . - 2 ID=cds.g2435.t1;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 12767 13023 . - . ID=g2435.t1.exon3;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 12767 13023 . - 1 ID=cds.g2435.t1;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 12338 12381 . - . ID=g2435.t1.exon4;Parent=g2435.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 12338 12381 . - 2 ID=cds.g2435.t1;Parent=g2435.t1 #PROT g2435.t1 g2435 MRVHHPGSDRFACRNYVVENVACCAEDALEIWVLDLSGPEISVGKATRIIFFVEGNPNAERTGGPLPKVPWGPRAPFVGSLPYIIPDPAHKVIAITEKGCGILRLSIVGVDWVMISDPKIIEEIVDKKDIYQKVARDGTPYETLAEVSGRGLFTANDDDEAQGIAYRCVMKAFSLKNIKGFVQPMLDEAKRFRDLFETYTSVGFGPRLLARRLNT* # PASA_UPDATE: g2431.t1, single gene model update, valid-1, status:[pasa:asmbl_10182,status:12], valid-1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . gene 791 3443 . + . ID=g2431;Name=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . mRNA 791 3443 . + . ID=g2431.t1;Parent=g2431;Name=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . exon 791 811 . + . ID=g2431.t1.exon1;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . CDS 791 811 . + 0 ID=cds.g2431.t1;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . exon 1171 1800 . + . ID=g2431.t1.exon2;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . CDS 1171 1800 . + 0 ID=cds.g2431.t1;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . exon 1969 3443 . + . ID=g2431.t1.exon3;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . CDS 1969 3240 . + 0 ID=cds.g2431.t1;Parent=g2431.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant . three_prime_UTR 3241 3443 . + . ID=g2431.t1.utr3p1;Parent=g2431.t1 #PROT g2431.t1 g2431 MSPGPPRDPDVQTVFDRSADGEDDAMDRKVHADRREELLKLAREHAEGQAYVVDRLESMNIKFQHVAHASPAGLSGTSLRSEFEDITIPFHELTFGDELGAGAFGRVYRGKYGADHVAIKRLVCDSLSEETLMEFKNEVRIMKALRHPNVVLLLGACFEKGRYAIVLEYMENRSLFHLLHGDVDMPWGLRWRMACEAARGMAHLYSRKPPIQHRDFKSLNVLVDKDFRTKISDFGLSNARTETSMRTHAGEGTLHWKAPELFRKGAKFGEKSDVYSYGVVLWELASRCVPWEKEEREGGVVIAMVLAGDRPDIPDDCPADFAHLIAACWAPRVDERPSFASAVEACDVHVDAPSRWQPSPLVIVNSSGGSQRTNAPAMDCLGMASPDADANRMPPLPSASPLDAMRLKADQGDAHAQYNLGICYAKGTGVVKDESMAVAWFRKAADQEHANAQYKLGNCYANGNGVVKDESMAVAWFRKAAEQEHADAQYNLGVCYVNGNGVVKDESMAVAWFRKAADQGDAHAQVNLGLCYADGNGMWKDESMAVAWFRKAADQGLVEAQFNLGLCYDKGNGVVQDESMAAAWYRKAADQGYAVAQYNLGNRYHIGVGVTKDKSMAIAWYRKAADQGLVEALRALMELE* # ORIGINAL: g2433.t1 original gene structure, not modified by PASA NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS gene 8788 8997 . - . ID=g2433;Name=g2433.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS mRNA 8788 8997 . - . ID=g2433.t1;Parent=g2433;Name=g2433.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 8788 8997 . - . ID=g2433.t1.exon1;Parent=g2433.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 8788 8997 . - 0 ID=cds.g2433.t1;Parent=g2433.t1 #PROT g2433.t1 g2433 MFADPAIGIQYEVAYSSQRRHVLNPPTTVEIEIHALSQCGHVFDSPALAKVEVTNAGQCGHVCYGGASI* # ORIGINAL: g2432.t1 original gene structure, not modified by PASA NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS gene 3848 4689 . + . ID=g2432;Name=g2432.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS mRNA 3848 4689 . + . ID=g2432.t1;Parent=g2432;Name=g2432.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 3848 3952 . + . ID=g2432.t1.exon1;Parent=g2432.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 3848 3952 . + 0 ID=cds.g2432.t1;Parent=g2432.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 4078 4689 . + . ID=g2432.t1.exon2;Parent=g2432.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 4078 4689 . + 0 ID=cds.g2432.t1;Parent=g2432.t1 #PROT g2432.t1 g2432 MSSGKQRARADSANAASEKASVERLAQTMHAPTHETVRAGKDTRRQQAPLCSIVASQTYSGALCYTIFVLALLASAPVMRVAADGATCEVRVTDSDDLIVSGVPGKTIALQGAAAIELDAPTLRIRDASGLKVPIQSLLDSLSKADSSQQTAVASLQSSLATIQSAVQSVQTDLQNLKGDTVKDLQSKIINIQANVTALLMQQLLLRDAALADVRSQLTQLAVNLTGNDVSAFLLVLG* # ORIGINAL: g2434.t1 original gene structure, not modified by PASA NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS gene 9246 11168 . + . ID=g2434;Name=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS mRNA 9246 11168 . + . ID=g2434.t1;Parent=g2434;Name=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 9246 9898 . + . ID=g2434.t1.exon1;Parent=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 9246 9898 . + 0 ID=cds.g2434.t1;Parent=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 10086 10908 . + . ID=g2434.t1.exon2;Parent=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 10086 10908 . + 1 ID=cds.g2434.t1;Parent=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS exon 11139 11168 . + . ID=g2434.t1.exon3;Parent=g2434.t1 NODE_972_length_15235_cov_22.3336_potentialcontaminant AUGUSTUS CDS 11139 11168 . + 0 ID=cds.g2434.t1;Parent=g2434.t1 #PROT g2434.t1 g2434 MREIKKSKILKFLSYFVGPIAFLIEAAAVLSAVLGDWLDCGIIVALLFINAIIGYFEEAKAESALDALKETLALRSRVIRNGQLIEMNSADIVPGDIIAVRLGDIVPADATLLGIGPTGEIAEVPLQIDQSALTGESLPVKRAQGDLIYSSSIVKQGQMLAAVSATGSNTFIGRAANLIAITNEPGHLQKVITKIGNFLIVITVAMVGIMIAIRLGCGAVECSAIEELASVDIRCSDKTGTLTLNELTFDKPHVAPGFTVEDLMLHALLTCEYGANDAIETAVRSNAVALVGEIPSHLKVVSFKPFDPVVKYSSAYYFDNLDKHFTVIKGAPHVILHKCGDPKDAHTVVNAFAHRGLRALGVAKLEGASDAQFTLMGLLSLLDPPRPDSAETIAHCKKLGVSVKMVTGDQLVIAKEVAHRLGMSRVIMDASSLADSRTDRQILARQCVKGDGFAQVIPEHKFKVVELLQELGHVVGMTGDGVNDAPALKKANLPLSLLSTT* # ORIGINAL: g11718.t1 original gene structure, not modified by PASA NODE_3140_length_4220_cov_39.1117 AUGUSTUS gene 1906 4122 . + . ID=g11718;Name=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS mRNA 1906 4122 . + . ID=g11718.t1;Parent=g11718;Name=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS exon 1906 3080 . + . ID=g11718.t1.exon1;Parent=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS CDS 1906 3080 . + 0 ID=cds.g11718.t1;Parent=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS exon 3391 3472 . + . ID=g11718.t1.exon2;Parent=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS CDS 3391 3472 . + 1 ID=cds.g11718.t1;Parent=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS exon 3965 4122 . + . ID=g11718.t1.exon3;Parent=g11718.t1 NODE_3140_length_4220_cov_39.1117 AUGUSTUS CDS 3965 4122 . + 0 ID=cds.g11718.t1;Parent=g11718.t1 #PROT g11718.t1 g11718 MASHHRAGPTHHTLREGNATMQSTMRGQTRAHATLQHPHNTAHATHAVSTTKGLHTQQRLGATAVPGRPDARTVAARLLSWAHAMHYPAHLHGARMPTADDLERLCRGNLLEPMIYLTERVVSERRAREVRGNLRLHGLDNLAGSDSASLEDKLRMARERSQLREVHEQTRAHLRQVKDDIAKVGAEIARMRTEMVEADCAAEASSLRVDQMRHQRVIANAYALSLASRVKSIDETSAALSGRAVHLSTLAAEGDVGGALFARDDSTNASASASTDAQLESAAGRKVRLLCGQISSFIASRNKGSVDVQGVDNRDGRVAGDVKEGNSTSLTASDRTDAGAANRLWAEVERLIGEHGPRALLSGLGACAKTAFESVAADTASVDIHRDARELKFRYEASGALRDAMGDGVQMRSVRQLLQDAQQRHLDMFIATEACLNTVYSVQPSREAVVDALHRRTAELFADKPADAAKM # ORIGINAL: g12874.t1 original gene structure, not modified by PASA NODE_2053_length_7913_cov_77.4649 AUGUSTUS gene 3656 4678 . + . ID=g12874;Name=g12874.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS mRNA 3656 4678 . + . ID=g12874.t1;Parent=g12874;Name=g12874.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 3656 4678 . + . ID=g12874.t1.exon1;Parent=g12874.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 3656 4678 . + 0 ID=cds.g12874.t1;Parent=g12874.t1 #PROT g12874.t1 g12874 MSSNTNCKCGNKMADITNSSFQSTVPGTQKRPLADPAADRPSTRIRYVKYTARGQYHDVDPLDVPAAYHPTQEQLDAHNAKRDTVPDCLVVCLNCDPGAPAIAPASVPAHWPMSQSGHDSSRPYACDYCPSAFSSSQSLSRHKHTHTRKMAVPTVSQVQRGRANKHAAAIATRMQLLAHSPSNSPSYSPSYSQSASSSAESADVDAFGTQVALVAEVAPITNDLSSNATGDGSDTHHAASLHTASGSVQGGDGGFPGRSDGMPESPLSPAQEFDFGNLKSLFDIDTQQDGYAMDVQFHTLFFPDESDMSDPLNCGDETDTQLESTALGFLNFPSDAESNE* # PASA_UPDATE: novel_model_11_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_3379,status:3], valid-1 NODE_2053_length_7913_cov_77.4649 . gene 5373 6111 . + . ID=novel_gene_11_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2053_length_7913_cov_77.4649 . mRNA 5373 6111 . + . ID=novel_model_11_5b6be656;Parent=novel_gene_11_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_2053_length_7913_cov_77.4649 . five_prime_UTR 5373 5507 . + . ID=novel_model_11_5b6be656.utr5p1;Parent=novel_model_11_5b6be656 NODE_2053_length_7913_cov_77.4649 . exon 5373 6111 . + . ID=novel_model_11_5b6be656.exon1;Parent=novel_model_11_5b6be656 NODE_2053_length_7913_cov_77.4649 . CDS 5508 5876 . + 0 ID=cds.novel_model_11_5b6be656;Parent=novel_model_11_5b6be656 NODE_2053_length_7913_cov_77.4649 . three_prime_UTR 5877 6111 . + . ID=novel_model_11_5b6be656.utr3p1;Parent=novel_model_11_5b6be656 #PROT novel_model_11_5b6be656 novel_gene_11_5b6be656 MVGIGSHVIMLTLFSSESVRCGDRRNGRCEETVEGALGGDRTHSVFDDTLIAWIANRIHVMGLDECGNMRSLRSFQHDEHLPSRSYSLSFWCGAATESLVVTEAKDGMLIALSTDDRGRPCV* # PASA_UPDATE: g12875.t1, single gene model update, valid-1, status:[pasa:asmbl_3381,status:12], valid-1 NODE_2053_length_7913_cov_77.4649 . gene 6133 7693 . - . ID=g12875;Name=g12875.t1 NODE_2053_length_7913_cov_77.4649 . mRNA 6133 7693 . - . ID=g12875.t1;Parent=g12875;Name=g12875.t1 NODE_2053_length_7913_cov_77.4649 . five_prime_UTR 7664 7693 . - . ID=g12875.t1.utr5p1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . exon 7613 7693 . - . ID=g12875.t1.exon1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . CDS 7613 7663 . - 0 ID=cds.g12875.t1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . exon 7267 7380 . - . ID=g12875.t1.exon2;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . CDS 7267 7380 . - 0 ID=cds.g12875.t1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . exon 6966 7022 . - . ID=g12875.t1.exon3;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . CDS 6966 7022 . - 0 ID=cds.g12875.t1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . exon 6677 6752 . - . ID=g12875.t1.exon4;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . CDS 6677 6752 . - 0 ID=cds.g12875.t1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . exon 6133 6473 . - . ID=g12875.t1.exon5;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . CDS 6235 6473 . - 2 ID=cds.g12875.t1;Parent=g12875.t1 NODE_2053_length_7913_cov_77.4649 . three_prime_UTR 6133 6234 . - . ID=g12875.t1.utr3p1;Parent=g12875.t1 #PROT g12875.t1 g12875 MSETSGHFRRLLVSVLQAHRDESMVVDPAKAHEDADALHKAGEKKWGTDESKFNQIFAVRNWYQLRATFDAYQKISGHEIEKAIKSEFSGDIEDSYLAIIEYVRSPPAYFAGRLYKSMKGAGTDDEGLIRAVITRAELDMVEIKAAFQTKYGKTLGSFIKGDCSGDYKKILLDLVNEN* # ORIGINAL: g12873.t1 original gene structure, not modified by PASA NODE_2053_length_7913_cov_77.4649 AUGUSTUS gene 123 2778 . - . ID=g12873;Name=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS mRNA 123 2778 . - . ID=g12873.t1;Parent=g12873;Name=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 2683 2778 . - . ID=g12873.t1.exon1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 2683 2778 . - 0 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 2154 2399 . - . ID=g12873.t1.exon2;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 2154 2399 . - 0 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 1763 1864 . - . ID=g12873.t1.exon3;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 1763 1864 . - 0 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 1165 1321 . - . ID=g12873.t1.exon4;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 1165 1321 . - 0 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 765 918 . - . ID=g12873.t1.exon5;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 765 918 . - 2 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 354 464 . - . ID=g12873.t1.exon6;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 354 464 . - 1 ID=cds.g12873.t1;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS exon 123 207 . - . ID=g12873.t1.exon7;Parent=g12873.t1 NODE_2053_length_7913_cov_77.4649 AUGUSTUS CDS 123 207 . - 1 ID=cds.g12873.t1;Parent=g12873.t1 #PROT g12873.t1 g12873 MARSAVLFLAVVAFIGAAIAAPLSQYTPESKKLAGPPSEFDLHALPSPTHDPEASHSALLRIDFTRELTADINGEILAWKGELPVDADKKFVLSLFTPHDKSIRLSLVNPKGEQIHLAQYLQRARFPLSSSDDGPEGSVFEFDASGVLGTWTFSVYWKSAALAAQSIAANAAVSNDAIVLLFNDNPIQIQSHMNSFVIARGKPVGFSARAFDAAEGRLVALDEEAVEVTMEIVPPEGAEMDMRMVRKSAVAMRTDIVDPNWEFTDGDYIADFSPELTGDYRAQVYFRGKTAEGVDFLRTTQHMFHVVADGLAVTVG* # PASA_UPDATE: g336.t1, single gene model update, valid-1, status:[pasa:asmbl_6975,status:12], valid-1 NODE_4106_length_2177_cov_40.8264 . gene 158 1883 . - . ID=g336;Name=g336.t1 NODE_4106_length_2177_cov_40.8264 . mRNA 158 1883 . - . ID=g336.t1;Parent=g336;Name=g336.t1 NODE_4106_length_2177_cov_40.8264 . five_prime_UTR 1754 1883 . - . ID=g336.t1.utr5p1;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . exon 1747 1883 . - . ID=g336.t1.exon1;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . CDS 1747 1753 . - 0 ID=cds.g336.t1;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . exon 1046 1652 . - . ID=g336.t1.exon2;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . CDS 1046 1652 . - 2 ID=cds.g336.t1;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . exon 158 668 . - . ID=g336.t1.exon3;Parent=g336.t1 NODE_4106_length_2177_cov_40.8264 . CDS 158 668 . - 1 ID=cds.g336.t1;Parent=g336.t1;3_prime_partial=true #PROT g336.t1 g336 MAGIRWSIVAFIACAIGLSSAEFLKNQRGDARCAYVRIDGVDVEAVTFTEVFGDNDEVIVSETGARRSDPKRLIDYDFSVPFATADTPDDSKEPELTLRLRHSQGTSTQLCALSVWCASENGTAYELATSCIGLPYPLLPTYLVPTAPLDDEPHIALYTFNDKTKIPLSPLLRANRVSASLFVNVRRNDKTVNLFPGMDSCNSLLGKCWLQYDQSRLSILSPTGPKPMPEPSGAFDQRSLTCDHRRLADVFKVITTALGDFDSASSYDETQWTQNTVLYGLVESSRAYYTCNNVASYFSQWGEKNAILPLSTECLRPYGSAEYNNDPCCNMNLRWSQCCIPRNAAYVYSGAVNVQDTLIVDVCDAVNETNSKQFR # ORIGINAL: g5300.t1 original gene structure, not modified by PASA NODE_1402_length_11559_cov_57.9582 AUGUSTUS gene 3498 5825 . + . ID=g5300;Name=g5300.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS mRNA 3498 5825 . + . ID=g5300.t1;Parent=g5300;Name=g5300.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 3498 5825 . + . ID=g5300.t1.exon1;Parent=g5300.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 3498 5825 . + 0 ID=cds.g5300.t1;Parent=g5300.t1 #PROT g5300.t1 g5300 MSNPIEFYLPDFSGEPPSKIARCLCQSILVFAGMCDATLNRTAGITVPTPQTNRVTECVRSMVYQASLLPDDAFAGENLGDSTSTMAWRLLYSSDTEPSMLFNFCYIFSLLRFPELCSKVTRAKMVANKKLMSRLRSAVASSDRNVSAYATIALAELLEYNRDIMTASLPACLKGIEAICAPNGDADALGPIFPPGERYVVRVMRMATGRDSWPAIRIDPSLCSAVIGFNSADPLRAPLFGIHDHIVMAYSTVMERQDNGKALEGVGLMRVIAGLFRIFAWTDPDWSRGPTNGTKVDTGCEYLPVAMEQALRLKCARGVTCSRRDCPCELKEAIMEYNAARASLSANIFDILRTQGYCVQGAINPIVHVACDHIARAHTDGDKLGRTVFESACATLIETSRVWLSEMQKTPQYAVDVGDMGTPFVRTHAAAVTRGAFTRMSGLAGPGPIAEVLANSGSHVHNVRLAMSFTSSIARASNATATVRPYSAFVEDGIKFPYKLLHTIRGFSAYSYTMDPALVPNIATQSALLATVVRHLAGAIVTKDAVMRVWAPVILVDIARAAKGFLGIVAGSSTTSRFCDDTLNTLVCLSANYASLPYGLAAADAIYLSNWLSARALAFGMGTTARDVESRNVWAQPQAPAAALKLARVACFCGKCDWNTALLDGATTPSAHVTGLCQCGWCEVGASGGFDPRKGKNVKAGDDAACGSDVAGDSNDGNACVPSDPLANATVSPACDQCGADDTRLYRCSRCNGPRYCSKDCQRAAWPSHKHACAK* # ORIGINAL: g5299.t1 original gene structure, not modified by PASA NODE_1402_length_11559_cov_57.9582 AUGUSTUS gene 197 2582 . - . ID=g5299;Name=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS mRNA 197 2582 . - . ID=g5299.t1;Parent=g5299;Name=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 2531 2582 . - . ID=g5299.t1.exon1;Parent=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 2531 2582 . - 0 ID=cds.g5299.t1;Parent=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 1702 1896 . - . ID=g5299.t1.exon2;Parent=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 1702 1896 . - 2 ID=cds.g5299.t1;Parent=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 197 1542 . - . ID=g5299.t1.exon3;Parent=g5299.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 197 1542 . - 2 ID=cds.g5299.t1;Parent=g5299.t1 #PROT g5299.t1 g5299 MASGNTGLSVLAALSVAAALVLFMAPAQSHAAGTPNCPISTGKFTGFCNGLACNPDENYYCWYTNDCYAFDAPCGLWNMTCAAGTSYCDVLARCIPPSTPCARALICAAGTKFCNLTDSCIGVAQECSVLICTPPNTRCFAKGKNVCLPPTEPCVANTQVFRGGSETYNPPATTYPSFDLKLGAGGAFESIINRRNTFYESYGVAPVKISEVGILLTSVSFGLGSLPRNSNDAAPSARTLSASDRGDSSFDASKGALIGPTGLIRVSSGQSNWFGSITLTFRGWNGKGVTIDDAAFDVKPGSPSSAYFDTWETTMYIVIKPTFTAPTQLRNYQWNFRLYQEVSEQGPKDRMMSAYSSLIQMGAANLNSILPMDPRSSWDFIETLLKSLQIDLETAEGRAALKSLRPDQLRVAVNQYAIPEWSPYDDEALYTSVMALANSALFISGDNLPLLYYSKGAWRSFPKSLTYPNGFLLPGWTRWAGSEASDISNGVYEFEAEVRVVTSTDSLTGPVVLSAANFDNTKTFISNDKAK # ORIGINAL: g5301.t1 original gene structure, not modified by PASA NODE_1402_length_11559_cov_57.9582 AUGUSTUS gene 6326 11491 . - . ID=g5301;Name=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS mRNA 6326 11491 . - . ID=g5301.t1;Parent=g5301;Name=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 11421 11491 . - . ID=g5301.t1.exon1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 11421 11491 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 11136 11305 . - . ID=g5301.t1.exon2;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 11136 11305 . - 1 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 10397 10995 . - . ID=g5301.t1.exon3;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 10397 10995 . - 2 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 10173 10207 . - . ID=g5301.t1.exon4;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 10173 10207 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 9635 9751 . - . ID=g5301.t1.exon5;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 9635 9751 . - 1 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 9190 9280 . - . ID=g5301.t1.exon6;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 9190 9280 . - 1 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 8558 8673 . - . ID=g5301.t1.exon7;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 8558 8673 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 8355 8391 . - . ID=g5301.t1.exon8;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 8355 8391 . - 1 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 8084 8206 . - . ID=g5301.t1.exon9;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 8084 8206 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 7737 7841 . - . ID=g5301.t1.exon10;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 7737 7841 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 7477 7578 . - . ID=g5301.t1.exon11;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 7477 7578 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 7036 7087 . - . ID=g5301.t1.exon12;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 7036 7087 . - 0 ID=cds.g5301.t1;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS exon 6326 6570 . - . ID=g5301.t1.exon13;Parent=g5301.t1 NODE_1402_length_11559_cov_57.9582 AUGUSTUS CDS 6326 6570 . - 2 ID=cds.g5301.t1;Parent=g5301.t1 #PROT g5301.t1 g5301 MAVVAGGKMYVYGGTSGVLTDELWILDLVSYLWTKSSLIGDLPPPLRNGVFVHGNGTLLYLFGGQQFSGEISNRLFTFDVGAVRWTVLTPSDTYGVNPKGVAQLGAAFVGNRIFFAGGITADGITSNSFYYDVTTNEWQLGRRTRTPVRSMGVVGFRQADDSTGCVYQPAPFLSLCVQQMRYSVVSVGGYTSEGGLDGSMSILFVGTAPIQPGGTAGAGSGTERAAWVVPVAVVVPVSTVCAVLIGALIVAGRSRRELHRKAHSWLIEPSDIEIKERIGEGAFGMVCEGVFRGTRVAIKLLRTGTDVSGSNSFLATLIDHEEELNKTNMQSWVSGKPRVVRMLSLIGPAGHGLAGSSRTQEASRLHERAFSSLTQEIETMYAYAIPNCIFCVFLIGFFFMVTLRHPNIVMFMGACLDKTLPCIVLELMKRALNDVYEDASDPFTWGFRLKVARDTALGMAYLHSANPPIFHRDLKPHNILISDIGQVKVSDFGLAQLKVEKKASAAGEGSQKLVGSYPWMSPEIIRGHPFTEYCDVYSYGVILCELTTRCLAYKDRRDIVAATLIVQVASGELRPTVREGPEVPSGFCALAERCIAASGPSRPSFKDIVSQVDGIAHTPL* # PASA_UPDATE: g7139.t1, single gene model update, valid-1, status:[pasa:asmbl_9375,status:12], valid-1 NODE_788_length_17682_cov_43.0906 . gene 10352 12004 . - . ID=g7139;Name=g7139.t1 NODE_788_length_17682_cov_43.0906 . mRNA 10352 12004 . - . ID=g7139.t1;Parent=g7139;Name=g7139.t1 NODE_788_length_17682_cov_43.0906 . five_prime_UTR 11948 12004 . - . ID=g7139.t1.utr5p1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . exon 11903 12004 . - . ID=g7139.t1.exon1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . CDS 11903 11947 . - 0 ID=cds.g7139.t1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . exon 11692 11789 . - . ID=g7139.t1.exon2;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . CDS 11692 11789 . - 0 ID=cds.g7139.t1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . exon 11460 11559 . - . ID=g7139.t1.exon3;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . CDS 11460 11559 . - 1 ID=cds.g7139.t1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . exon 10922 11104 . - . ID=g7139.t1.exon4;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . CDS 10922 11104 . - 0 ID=cds.g7139.t1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . exon 10352 10533 . - . ID=g7139.t1.exon5;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . CDS 10414 10533 . - 0 ID=cds.g7139.t1;Parent=g7139.t1 NODE_788_length_17682_cov_43.0906 . three_prime_UTR 10352 10413 . - . ID=g7139.t1.utr3p1;Parent=g7139.t1 #PROT g7139.t1 g7139 MSRQTTVRPIEVKKINAELFTLTYGSLVAQLIKDFEDDDEVNRQLERMGYNIGVRLIEDFLAHSGVGRCQDFKETAEVISKVGFKMFLGITPTVANWSADSKEFSLLFDDNPMIDWVELPEEHKALYYANILCGVLRGALEMIQLKVEAKFVKDVLQGDEITEMRVRLIQILQDAAPPGED* # ORIGINAL: g7137.t1 original gene structure, not modified by PASA NODE_788_length_17682_cov_43.0906 AUGUSTUS gene 1558 8451 . - . ID=g7137;Name=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS mRNA 1558 8451 . - . ID=g7137.t1;Parent=g7137;Name=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 7896 8451 . - . ID=g7137.t1.exon1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 7896 8451 . - 0 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 7690 7783 . - . ID=g7137.t1.exon2;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 7690 7783 . - 2 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 6877 7232 . - . ID=g7137.t1.exon3;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 6877 7232 . - 1 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 6498 6652 . - . ID=g7137.t1.exon4;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 6498 6652 . - 2 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 6191 6240 . - . ID=g7137.t1.exon5;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 6191 6240 . - 0 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 5379 5867 . - . ID=g7137.t1.exon6;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 5379 5867 . - 1 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 5095 5175 . - . ID=g7137.t1.exon7;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 5095 5175 . - 1 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 4705 4766 . - . ID=g7137.t1.exon8;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 4705 4766 . - 1 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 4541 4587 . - . ID=g7137.t1.exon9;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 4541 4587 . - 2 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 4078 4228 . - . ID=g7137.t1.exon10;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 4078 4228 . - 0 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 3582 3707 . - . ID=g7137.t1.exon11;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 3582 3707 . - 2 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 2320 2681 . - . ID=g7137.t1.exon12;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 2320 2681 . - 2 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 1969 2103 . - . ID=g7137.t1.exon13;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 1969 2103 . - 0 ID=cds.g7137.t1;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 1558 1707 . - . ID=g7137.t1.exon14;Parent=g7137.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 1558 1707 . - 0 ID=cds.g7137.t1;Parent=g7137.t1 #PROT g7137.t1 g7137 MLRQSAGAVAASAVREGDANAIADSCTDTAANTASDHFIAVTVEDELPAVAIATRPTVEEPLGEHVVGDGQRGGVRTKTKKAARSSRRGGLRIRVNTAQTAMAQPALTAPSDAPCDVIKTGSAFAATATDATFCNTAVESADGGAISVDALEGSGESELVVRSLARPVGKPKRYVQDIIDGPPKKKQRLSALAAALAERMTPGDFGGYVFQSSICQRYISKFPDITMCIDCRRRQRGMTCRFALFRKIKENATFDFATESDRARIDMMALRMPDLAAAHKSSMGGAMHTSPLTSVVDLCERAAASAYIAANIGPSFSAFVDAELNAVGAAGKKGSPRIYFKAPTPDSREICDACLTGLIASQWFCSLCGYAVCLACYDEFLRRAQAHSNSGEQFFGFCHKSQMLVHDPSMFRFARMIRTVDFQTSCDVFRNFGQPCVTACASLEEQPFVESVLIGASGVTGGKEGDAGKQTSKRKDKGWGSGAGEEPGSAMATANAMRQRGFPMGIDRFGPTYGPTIFRGLSCLPPHIVACGNRVLVLLDPLHPSNAGAFTVWWQRGLPVIFRGLHRLLKQQWTPQAFGRIGGGTVVAMVDCRSGEIVEGVTLGRFWEGFDTPAQRPLDKHGRPQLLKLKDWPASEDFRDCLPAYYNDIMQALPMKQYTSRDGYLNLAAYLPGDCVPPDLGPKMYNAYGQPSLAKEGTTNLHVDISDAVNMMAFAGPPDDETGGLGGDAALDSDDDDFSSRPLPHVTLDDESDDVGEQGCDDVGPAGAVWDIYSARDRERMAGVLLEKAASDGIRGVTHPIHDQSLFCDHGMRAALTDAGIRGARFFQRKGDAVFIPAGAPHQVRNLRPCIKIAEDFVSPENMAQSLALAGEFRQLTKSHSNREDKLQAYNILYNAASHAAATLLDLSSNSGLSADELAESTTYGASMAARVALYPR* # PASA_UPDATE: g7138.t1, single gene model update, valid-1, status:[pasa:asmbl_9374,status:3], valid-1 NODE_788_length_17682_cov_43.0906 . gene 8980 10275 . + . ID=g7138;Name=g7138.t1 NODE_788_length_17682_cov_43.0906 . mRNA 8980 10275 . + . ID=g7138.t1;Parent=g7138;Name=g7138.t1 NODE_788_length_17682_cov_43.0906 . five_prime_UTR 8980 9039 . + . ID=g7138.t1.utr5p1;Parent=g7138.t1 NODE_788_length_17682_cov_43.0906 . exon 8980 10275 . + . ID=g7138.t1.exon1;Parent=g7138.t1 NODE_788_length_17682_cov_43.0906 . CDS 9040 10107 . + 0 ID=cds.g7138.t1;Parent=g7138.t1 NODE_788_length_17682_cov_43.0906 . three_prime_UTR 10108 10275 . + . ID=g7138.t1.utr3p1;Parent=g7138.t1 #PROT g7138.t1 g7138 MERPQHTQSLVHYDNDDEEHNANAPSHVSSAQETAGPPNGGPVQAPLRLVDHDMSDESDGRNDANDVAMPVAPADSEGIADAPMDIDEAASHQEEEWVAGNEADDESQGRIAPFMNVCAVRLPPDPRGEPAPPLAMKVRRWHSATRPQSVNAMLNRTKDFRNPNIYEKLVSYFDLCETGTNYPLVLQSGLVFGPESYYEELAKAQVEHSDRRERQRREQQHQRSIQFVHSGRSSAAPSPTPAAQTAMQNAAAVAARLGLGLGRGGRVGAQGGAGQQQPPHVALPGSGQTHAHAHGHHGHHHQTHPHAHTHTHTHIPAGAHPTHSAAAANMASAVQAAARKATELAKMSGAVPQRK* # ORIGINAL: g7136.t1 original gene structure, not modified by PASA NODE_788_length_17682_cov_43.0906 AUGUSTUS gene 140 426 . - . ID=g7136;Name=g7136.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS mRNA 140 426 . - . ID=g7136.t1;Parent=g7136;Name=g7136.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS exon 140 426 . - . ID=g7136.t1.exon1;Parent=g7136.t1 NODE_788_length_17682_cov_43.0906 AUGUSTUS CDS 140 426 . - 0 ID=cds.g7136.t1;Parent=g7136.t1 #PROT g7136.t1 g7136 MAATVARMSRALLGASRCTPTSQWRLVHSSATQAGSAAAAAQQSKSKPTVLSTKQVADFDRDGIVIIRDFWTPEEKQNLLAWTNEVASWPETAGK # PASA_UPDATE: g7140.t1, single gene model update, valid-1, status:[pasa:asmbl_9376,status:12], valid-1 NODE_788_length_17682_cov_43.0906 . gene 12306 15171 . + . ID=g7140;Name=g7140.t1 NODE_788_length_17682_cov_43.0906 . mRNA 12306 15171 . + . ID=g7140.t1;Parent=g7140;Name=g7140.t1 NODE_788_length_17682_cov_43.0906 . five_prime_UTR 12306 12333 . + . ID=g7140.t1.utr5p1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 12306 12413 . + . ID=g7140.t1.exon1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 12334 12413 . + 0 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 12632 13253 . + . ID=g7140.t1.exon2;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 12632 13253 . + 1 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 13408 13994 . + . ID=g7140.t1.exon3;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 13408 13994 . + 0 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 14161 14330 . + . ID=g7140.t1.exon4;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 14161 14330 . + 1 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 14558 14677 . + . ID=g7140.t1.exon5;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 14558 14677 . + 2 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . exon 14965 15171 . + . ID=g7140.t1.exon6;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . CDS 14965 15125 . + 2 ID=cds.g7140.t1;Parent=g7140.t1 NODE_788_length_17682_cov_43.0906 . three_prime_UTR 15126 15171 . + . ID=g7140.t1.utr3p1;Parent=g7140.t1 #PROT g7140.t1 g7140 MCGLVKMTEFSEYELRRLENIRQNERVLAELNLAGNASGTLIGTTGKRRSAAPSHPLVKRRKADAHPTRMSARLANRPPAETTAAYAPTGADGGATPLHSSHLRGFRLPSGESLFDPSNDVPAPALAAFFEHISDLGACQREHRHVKTGMSAAEYESAVGRMSLSASMVRKSVPERIYRVAVHPAVTHPIVLTGDKMGHLGVWSCATDDANITPGVREGVVVLRPHGLPVAGILVDPSNSTRIITCGYDACLVASDLRSTLHTVLHADSEYDDTGAGYKGMTFGNSAGSIVHLAMDSGAVRTTDLRSPATPVAMLTPSPSADTAGVVSLTRGGRPRRSTRKDRPRGDEQHDAEGNSVDGAAASASLTFPAVHDPYRYTVTVTGEWPLHERKMSSVDVCPTNENLIATSSLDRTVALWDARKLQAHKPLHTLEHGKSVTSATFSRISGNRLLTTSYDDHIRIVDGVQQLTVGDAGLHVVRVRHNNQTGRWVTSFRAEWDPSSDDHYAIGNMERAIDVYAAPTMSSPTGHLVRSLHSDENMTAIPAVVAFHPSMPWIVGGTGSGRICMFQAPLEANTRCHA* # ORIGINAL: g8390.t1 original gene structure, not modified by PASA NODE_3532_length_3260_cov_37.8292 AUGUSTUS gene 347 3225 . + . ID=g8390;Name=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS mRNA 347 3225 . + . ID=g8390.t1;Parent=g8390;Name=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 347 1607 . + . ID=g8390.t1.exon1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 347 1607 . + 0 ID=cds.g8390.t1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 1939 2022 . + . ID=g8390.t1.exon2;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 1939 2022 . + 2 ID=cds.g8390.t1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 2283 2466 . + . ID=g8390.t1.exon3;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 2283 2466 . + 2 ID=cds.g8390.t1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 2637 2914 . + . ID=g8390.t1.exon4;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 2637 2914 . + 1 ID=cds.g8390.t1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 3075 3134 . + . ID=g8390.t1.exon5;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 3075 3134 . + 2 ID=cds.g8390.t1;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS exon 3221 3225 . + . ID=g8390.t1.exon6;Parent=g8390.t1 NODE_3532_length_3260_cov_37.8292 AUGUSTUS CDS 3221 3225 . + 2 ID=cds.g8390.t1;Parent=g8390.t1 #PROT g8390.t1 g8390 MARERSARPRHLRRSLGDDHRQHLLSDDIDVSGDDNTVYPPSTGIDSASMASSRRRLRSHSAGSIDPEPRHTRTHSHSRSTRAHSSASPSTKQKNEANTASMPMRDIRLERTRSDLGEIPGDTSDSDSAESVKSAHSVRSTRSAGSSASRHSSSSHTLTPGSLRRRMSDPDFQLAARMQQLKQQQSFVTDGTVKHVLELEGMGAPMKRSDSISSLRSVRSLTMDVAALSAFDPLHGAAHSRSSAGVAGVRPLPSSAETAAERHSQSSLFHIRNWIAHGAVDDSSLGASFFDVGRPSLQSDSEMDGTGVGGESVPIERESYDAGGGHVGRDSVSVSIHATQEEQNGAGGKASPSPWKKGGPLADFVRLLPHLPKFVTKLKLKPALTITDLPKRTVDYDSQEAEEHVIPFILELGQALQQCCVPAHRLEYELDLISKAFGIQGHFFTVPGVFFSSFGSPTTVLSPFTHLITTGGATWEVEKIRQLENLGEKVAFGHLSCAEGMLKIEDIMAEPPLYGNFVTAVSFAACSCGIAQLFGGSANDLFASTVVGMFVGLLCVLCVFFPRLNPMSDILSGASSAIFAGLCAHLFKTSEFVVTICGIIALVPGLSITVAVAEIASGKLVPA* # ORIGINAL: g8763.t1 original gene structure, not modified by PASA NODE_2073_length_7849_cov_34.6125 AUGUSTUS gene 5706 7456 . + . ID=g8763;Name=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS mRNA 5706 7456 . + . ID=g8763.t1;Parent=g8763;Name=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 5706 5717 . + . ID=g8763.t1.exon1;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 5706 5717 . + 0 ID=cds.g8763.t1;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 6263 6402 . + . ID=g8763.t1.exon2;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 6263 6402 . + 0 ID=cds.g8763.t1;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 6675 6915 . + . ID=g8763.t1.exon3;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 6675 6915 . + 1 ID=cds.g8763.t1;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 7454 7456 . + . ID=g8763.t1.exon4;Parent=g8763.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 7454 7456 . + 0 ID=cds.g8763.t1;Parent=g8763.t1 #PROT g8763.t1 g8763 MPDRAPLGSGGFAGASKGVYAGRPVVFKLFHRQNWTPMELKELAAEAETLRITSHANILPVLCVSLRPPNVGLVAPLAPRGSLWSVLANQSVPVDTRREVTWALGAARAMDHINGIQPPLSLVQLKTTSLM* # PASA_UPDATE: g8762.t1, single gene model update, valid-1, status:[pasa:asmbl_3423,status:12],[pasa:asmbl_3424,status:13], valid-1 NODE_2073_length_7849_cov_34.6125 . gene 3397 4633 . - . ID=g8762;Name=g8762.t1 NODE_2073_length_7849_cov_34.6125 . mRNA 3397 4633 . - . ID=g8762.t1;Parent=g8762;Name=g8762.t1 NODE_2073_length_7849_cov_34.6125 . five_prime_UTR 4574 4633 . - . ID=g8762.t1.utr5p1;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . exon 4385 4633 . - . ID=g8762.t1.exon1;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . CDS 4385 4573 . - 0 ID=cds.g8762.t1;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . exon 3510 4094 . - . ID=g8762.t1.exon2;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . CDS 3957 4094 . - 0 ID=cds.g8762.t1;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . exon 3397 3416 . - . ID=g8762.t1.exon3;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . three_prime_UTR 3510 3956 . - . ID=g8762.t1.utr3p1;Parent=g8762.t1 NODE_2073_length_7849_cov_34.6125 . three_prime_UTR 3397 3416 . - . ID=g8762.t1.utr3p2;Parent=g8762.t1 #PROT g8762.t1 g8762 MKVIVDFCIVPISGKGLSMSREIAECERILTEEFGLKTQLHAYGTNIEGEWDAVFAAIKRCHEVVHGMGVPRITTTIKAGTRTDREQTMEDKIESVRDKMKSAKEFSQ* # ORIGINAL: g8760.t1 original gene structure, not modified by PASA NODE_2073_length_7849_cov_34.6125 AUGUSTUS gene 230 1321 . - . ID=g8760;Name=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS mRNA 230 1321 . - . ID=g8760.t1;Parent=g8760;Name=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 1283 1321 . - . ID=g8760.t1.exon1;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 1283 1321 . - 0 ID=cds.g8760.t1;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 1031 1118 . - . ID=g8760.t1.exon2;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 1031 1118 . - 0 ID=cds.g8760.t1;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 603 742 . - . ID=g8760.t1.exon3;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 603 742 . - 2 ID=cds.g8760.t1;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS exon 230 289 . - . ID=g8760.t1.exon4;Parent=g8760.t1 NODE_2073_length_7849_cov_34.6125 AUGUSTUS CDS 230 289 . - 0 ID=cds.g8760.t1;Parent=g8760.t1 #PROT g8760.t1 g8760 MLKSKSFVKKTRKGGVLTVVREHYLRDDVWCGSQRCTVCQHTDPILDMRPDNIDVIHVNSDITADDAPVDSAIGTHYIVPDTNVVLHQMDVLEHAALKNAIILQTVLDE # PASA_UPDATE: g8761.t1, single gene model update, valid-1, status:[pasa:asmbl_3425,status:12], valid-1 NODE_2073_length_7849_cov_34.6125 . gene 1774 2438 . + . ID=g8761;Name=g8761.t1 NODE_2073_length_7849_cov_34.6125 . mRNA 1774 2438 . + . ID=g8761.t1;Parent=g8761;Name=g8761.t1 NODE_2073_length_7849_cov_34.6125 . five_prime_UTR 1774 1979 . + . ID=g8761.t1.utr5p1;Parent=g8761.t1 NODE_2073_length_7849_cov_34.6125 . exon 1774 2438 . + . ID=g8761.t1.exon1;Parent=g8761.t1 NODE_2073_length_7849_cov_34.6125 . CDS 1980 2438 . + 0 ID=cds.g8761.t1;Parent=g8761.t1 #PROT g8761.t1 g8761 MISTVCARPRSVIARVPRVLASALVCHHQRGYAAPAQAPPASTKLTLTATKLTPERSAAAEPVKEYTDVRLSYAYSKKATAFVVFHPVKLPPATGRILGRYDLTNTLTTAQIIEARRLRIEGNASVHQLAKKWVSSWKFFVLVFLFFFWLSV* # ORIGINAL: g13692.t1 original gene structure, not modified by PASA NODE_4626_length_1395_cov_31.3379 AUGUSTUS gene 121 623 . + . ID=g13692;Name=g13692.t1 NODE_4626_length_1395_cov_31.3379 AUGUSTUS mRNA 121 623 . + . ID=g13692.t1;Parent=g13692;Name=g13692.t1 NODE_4626_length_1395_cov_31.3379 AUGUSTUS exon 121 311 . + . ID=g13692.t1.exon1;Parent=g13692.t1 NODE_4626_length_1395_cov_31.3379 AUGUSTUS CDS 121 311 . + 2 ID=cds.g13692.t1;Parent=g13692.t1 NODE_4626_length_1395_cov_31.3379 AUGUSTUS exon 516 623 . + . ID=g13692.t1.exon2;Parent=g13692.t1 NODE_4626_length_1395_cov_31.3379 AUGUSTUS CDS 516 623 . + 0 ID=cds.g13692.t1;Parent=g13692.t1 #PROT g13692.t1 g13692 TLRFGRTANPWRVCPCALYSPTYSSRRLFCFTLWTTTRAGSSSSHLPSVCSLKCGRSRRRLCFMWTTSTRSSGSSLASDTTTGRRTSLPRRRSTTRWEH # ORIGINAL: g11822.t1 original gene structure, not modified by PASA NODE_2942_length_4675_cov_47.3617 AUGUSTUS gene 1625 2020 . - . ID=g11822;Name=g11822.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS mRNA 1625 2020 . - . ID=g11822.t1;Parent=g11822;Name=g11822.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS exon 1625 2020 . - . ID=g11822.t1.exon1;Parent=g11822.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS CDS 1625 2020 . - 0 ID=cds.g11822.t1;Parent=g11822.t1 #PROT g11822.t1 g11822 MAEDSFVVRGQRVNDLEFINAAPFVGNMTTVRTRSSRTDPVPIIVIQGGYRANMAKVVQEIFKWLGDTGRFWTVCAIEGEFDGEHLTSLLNGLNRTKSREECREFLQKQTALIDLSKVETCATRRGRGLVL* # ORIGINAL: g11823.t1 original gene structure, not modified by PASA NODE_2942_length_4675_cov_47.3617 AUGUSTUS gene 3393 4181 . - . ID=g11823;Name=g11823.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS mRNA 3393 4181 . - . ID=g11823.t1;Parent=g11823;Name=g11823.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS exon 3393 4181 . - . ID=g11823.t1.exon1;Parent=g11823.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS CDS 3393 4181 . - 0 ID=cds.g11823.t1;Parent=g11823.t1 #PROT g11823.t1 g11823 MCEVIEPPSPIRVAMYRCDKKFWTDVVESLFEEHDAIGILLLSGEQAVFLKVEGTVRTVVKTVHCYRQKLQKKGGQSAPRFSRIRENQIDEYVTLIVEETKRAFYNFTVNKATISKLIIGYTSKDIVRLVTSQNEFCRFFPDATLVTITDICIDQNVPTCLAAVNAEGSDIARDLPEHLQEMIARADDRLVYGQDELRKCLAEYHIEKIYALPNLLSSSCNCVVHEIDSPVLASFGGMIGVAYQGVAPPYDAVESFYNKELA* # ORIGINAL: g11821.t1 original gene structure, not modified by PASA NODE_2942_length_4675_cov_47.3617 AUGUSTUS gene 1 217 . - . ID=g11821;Name=g11821.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS mRNA 1 217 . - . ID=g11821.t1;Parent=g11821;Name=g11821.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS exon 1 217 . - . ID=g11821.t1.exon1;Parent=g11821.t1 NODE_2942_length_4675_cov_47.3617 AUGUSTUS CDS 1 217 . - 0 ID=cds.g11821.t1;Parent=g11821.t1 #PROT g11821.t1 g11821 MADTINLGDCFIYQDDRNASEQIGQIGHDEQIGQIEPTAYEQLVLFMDSPESKAVVTHRTGDVIRCMTVSMD # ORIGINAL: g2929.t1 original gene structure, not modified by PASA NODE_7661_length_418_cov_112.087_potentialcontaminant AUGUSTUS gene 1 327 . - . ID=g2929;Name=g2929.t1 NODE_7661_length_418_cov_112.087_potentialcontaminant AUGUSTUS mRNA 1 327 . - . ID=g2929.t1;Parent=g2929;Name=g2929.t1 NODE_7661_length_418_cov_112.087_potentialcontaminant AUGUSTUS exon 1 327 . - . ID=g2929.t1.exon1;Parent=g2929.t1 NODE_7661_length_418_cov_112.087_potentialcontaminant AUGUSTUS CDS 1 327 . - 0 ID=cds.g2929.t1;Parent=g2929.t1 #PROT g2929.t1 g2929 MASGSFGKIAKEWRLKTGLTTEFEEAPIDFNELSAVGRKGALEAYTEIWGKSITGGTATLRAEKAEAVKRYVDRMIKERGPASYDPLALNKSPDFVQELEKEWSDIVGV # PASA_UPDATE: g14099.t1, single gene model update, valid-1, status:[pasa:asmbl_7570,status:12], valid-1 NODE_473_length_23079_cov_57.5019 . gene 1880 3136 . - . ID=g14099;Name=g14099.t1 NODE_473_length_23079_cov_57.5019 . mRNA 1880 3136 . - . ID=g14099.t1;Parent=g14099;Name=g14099.t1 NODE_473_length_23079_cov_57.5019 . five_prime_UTR 3030 3136 . - . ID=g14099.t1.utr5p1;Parent=g14099.t1 NODE_473_length_23079_cov_57.5019 . exon 2875 3136 . - . ID=g14099.t1.exon1;Parent=g14099.t1 NODE_473_length_23079_cov_57.5019 . CDS 2875 3029 . - 0 ID=cds.g14099.t1;Parent=g14099.t1 NODE_473_length_23079_cov_57.5019 . exon 1880 2699 . - . ID=g14099.t1.exon2;Parent=g14099.t1 NODE_473_length_23079_cov_57.5019 . CDS 2018 2699 . - 1 ID=cds.g14099.t1;Parent=g14099.t1 NODE_473_length_23079_cov_57.5019 . three_prime_UTR 1880 2017 . - . ID=g14099.t1.utr3p1;Parent=g14099.t1 #PROT g14099.t1 g14099 MSKRGDVLTANERTLIKNLKSLVNSQVMSDVTFLVGDDKRKMYGHKCIISARCEVFRAMFEDQGSKDHTPFALPDIQPLTFISMLDYLYTGQFSANSETLVELIGCAIEYGLEEMKNLCVDHVYNILSAENACEFLQASISYHLEEMQANCMEFVEKHTGAVFKSKSFVEITEGALETILRSSDLAVDEMDVLNAVRAWANVQSVVSEKPLQSVVKNVIEFVRFPLMSSDELSTVEDDNEKTRYIPLRLISDAWKYHALKNPDPKNLQQTPRTGTRRR* # ORIGINAL: g14101.t1 original gene structure, not modified by PASA NODE_473_length_23079_cov_57.5019 AUGUSTUS gene 7018 22774 . + . ID=g14101;Name=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS mRNA 7018 22774 . + . ID=g14101.t1;Parent=g14101;Name=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 7018 7662 . + . ID=g14101.t1.exon1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 7018 7662 . + 0 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 7825 8482 . + . ID=g14101.t1.exon2;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 7825 8482 . + 0 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 8757 9047 . + . ID=g14101.t1.exon3;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 8757 9047 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 9315 9602 . + . ID=g14101.t1.exon4;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 9315 9602 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 9794 12979 . + . ID=g14101.t1.exon5;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 9794 12979 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 13168 13346 . + . ID=g14101.t1.exon6;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 13168 13346 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 13696 13807 . + . ID=g14101.t1.exon7;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 13696 13807 . + 0 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 14221 14514 . + . ID=g14101.t1.exon8;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 14221 14514 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 14729 15010 . + . ID=g14101.t1.exon9;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 14729 15010 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 15164 15457 . + . ID=g14101.t1.exon10;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 15164 15457 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 15589 15876 . + . ID=g14101.t1.exon11;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 15589 15876 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 16015 16299 . + . ID=g14101.t1.exon12;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 16015 16299 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 16488 16778 . + . ID=g14101.t1.exon13;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 16488 16778 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 16944 17234 . + . ID=g14101.t1.exon14;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 16944 17234 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 17350 18216 . + . ID=g14101.t1.exon15;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 17350 18216 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 18484 18774 . + . ID=g14101.t1.exon16;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 18484 18774 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 19018 19305 . + . ID=g14101.t1.exon17;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 19018 19305 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 19611 19904 . + . ID=g14101.t1.exon18;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 19611 19904 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 20105 20392 . + . ID=g14101.t1.exon19;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 20105 20392 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 20670 20951 . + . ID=g14101.t1.exon20;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 20670 20951 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 21192 21476 . + . ID=g14101.t1.exon21;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 21192 21476 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 21746 22036 . + . ID=g14101.t1.exon22;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 21746 22036 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS exon 22152 22774 . + . ID=g14101.t1.exon23;Parent=g14101.t1 NODE_473_length_23079_cov_57.5019 AUGUSTUS CDS 22152 22774 . + 2 ID=cds.g14101.t1;Parent=g14101.t1 #PROT g14101.t1 g14101 MALAVHRLVAVALVLLCATTTCVVAQPGANAYVILYQIGTNGNCDSYCCCGSCPCDSVCTWQVQYPGEGKVYTYRTREISNDNNPVYNDQQSWTVSYYGGTIQVYITCIDNDVGSSENIGNIGEWKTMAVGSGTESVVQYNGNSNLRYATFKAKATCYSNYYSSNCQVYCVQSSRCLGCGANGCTGCLAGWTGMNCDQDINDCASNPCSNGGTCSDCGAVCYSCSCPDIWTGPTCASVRQWAPTGITISASTFNENSAANTFIGTLSTADRNSVQGDAARYSLTNDAGGRVAISGANLVVGFTLTDFESTPSLSVIVRSTDNAGNYVDVTFTLTVVNVNEPPTDIALSATSIAENNALNANIGTLTGADPDSATLSFTLVSNPTGFFRIVAGTNILQTNFVFNFETMARSYALTIRVTDSGNLYFDKSFTITLTDVNEAPTNIALSSSSINENLGGATVGTFTTTDPDASSSTFTYSLISNPNNAFSIVGTALVTSGSGLNFETTPSVAITVRTTDTSSLTFDKQFTITVNNVNESPFDISLTTTSVNENTASGTAFATIGCSDPDAGSTFTLSIASDSAGAFSVSGTQLKLAIAPNFEAVPSYALTLRCVDQSGLGFNEAFTISIIDVNEAPTALAISTTFIAENNVVNAVVGRFATTDADAGESFRYTITLNPSSAFSVDAGGNLLALLNFDYEGTRSFPITVMSTDKGGLTVTNSFTISVTNVNEAPTSITLSASSLAENNAIGVTIGTLTGSDPDGDALTFSLSANVDGAFSVSGNLLKAAIAFNFEFKSRYDFSVQATDGGGRSIIVPFTVSVTDVNEAPTGLVLNGITSGTVRENAVGALVGTLTTADPDAGDSFTYAFASNPGNLFSVTGSQLFTAVALDFETQPTLSVQLTTTDRAGLVSSARTFTISVTNVNEAPTGVALSATSINENVAPGAVVGLLSAVGDPDAGDSFTFQLVTNPGNAFVISGTQLVTALSFDFETKPSYSISVTATDAGGLSATTSFIVNVRDVNEAPQNILLSTNTIAENQNVGTVLGSISAVDVDASESFTYTLNGDTTNAFLLAGNSVTMRRSINFELQPFIDISITAADKGNLQVTVAFRITITNVNEAPTGISLSALTIAENQGANTVIGTLAVTGDPDVGDSNTCALTANPSTAFNIAGLQLRSSNVFDFESASTYTIQVTCTDRGGLSVAASFVISVTDVNEAPTGIRFSASTIPENSAVGVTVGTATATGDPDSGASFTYALVTNPGSFFSLVGNSLLVAANIDFETTPTVALSIRATDNGGLSVTATWTVTITNVNEVPTAITVSAQAVSENMPSGTEVATLATVDPDAGNTFTYSLQVASALFAIQANKLVTTASIDFEATPSASITLTSTDQGGLSVNSAFTITVRNVNEAPTAISITASSIAENNAVNAAIGTLSATDPDAGEALSFSLDLNPGSNFGIQGTQLIAVKAFDFEAQQSYAVGVVVTDRGALTFRRTITISVSNVNERPLSISITATSVAEDATVGAIIGLFSTSDPDVGDTFTYTLTGTAALTIAADGSLRTATALNFEATPSYSISVTSRDAGGLTVQSNFVITVTDVNEPPTGMSITAQSVTENVNAGTVVGTLSTMGDPDAGEAATYSITVNPNSLFTIQNGNQLATSGKPNYEDGAYRIVTVRTTDKGGLFFTTSFNITVVDVNEAPTDWSLSKSNIAENVNIGSVMGTLSQIGDPDVGDVWTFTLTSNPDNAFSISGASLMTTAAVNFETKSSYVIKIKVSDKGNLFFEKQITVTVDDVNEAPTGITISASSVNENVAAGTLIGTFATTGDPDASETSTYSFNKNPSNTFAISGGNRLVTLGAIDFEAQTSYVVGIVSTDKGGLFVAVDFTITVNNKNEAPTSVSITSTVVSEIAPIGTTIGTLRGTDPDAGDTLTFTLTSNPQNAFSIQGALLVSTIVFDVRTSYSIGVTVTDAGLLTFAGVMTITVQAVDQTPSSLVLIGTTVKENMPSATAIGTLSCTGSFAPDATISYTIKVNPSSAFSISGTSLLTTQPLNYETQQSYAVTVTCKESKKLLSIDKVFNIAIQDVNEAPTAIGISATTILENSNAGTTIGTFSTEDPDSANTFTYTFVTNPSSAFAIVGNALKSNGVYDFETTPTITFTVRTADQDGLPFTKDITITVQDKNEAPTDITIDKATIDENLPIGTVVGRLTTIDPDANEVFVYSFGAATTDFTLDNGALKTNAAFDFETKSSYSVSIKTTDRGGLPFTKTLTITVNNVNEAPKGITLSATSIAENNAVNAVIGTLAATGDPDASDAWVYTVTKNPSSRFGVSGSSLVAAAALDFEGQSTYVVGVTATDKGGLAVAIDFTITVTNVNEAPTSVTLSAQTVSEIAAVGTIVGNLAWADVDAADAVTLTLTTNPNGAFAITNNNALVTAAILNFAVKPSYAIAITGTDKGGLTFVLSATITVTFVNKVPTGITLTASTVAENSASTTIGTLAAIGSFPPDSTFSYALKVNPGTSFSISNNQLVTAKALNFEVQSSFTVTVTVTENKFGGTFDKDFVVTVTDVNEAPTAVSLSSTTINENLAIGTTIGTLTSTDQDSGNTFTYTIETDVSDAFSIVGNALNSKIVFNFESKNTYSVTIRTTDQGLLFKTQQFTVTVVDVNEAPTDVSLDALTVAENSVVGTLIGRLSTTGDPDAVDSFTYTFGVANALFTIDRDVLRTNSVLNYESTRTLTVTIVTTDKGSLQATRAFTISILDVNEPPTAMTLSASSVNENVAVGTVVGALATQGDPDASDTSTYTLTKNPASTFAISGSNLVTNASIDFETQTSFAITVVSTDKGGLFVSQSYTITVVDVNEAPTSVQLSSRTISETAPVNTVIGSLSSTDPDFGDAVTLTLTTNPSNTFAISGGSLVTNALLNFATRSSYDIVIKATDKSNQFLAVPVTINVQYVDKTPTGVVLDTTTIRENLNAGTAIGNLNTLGNFQPDSTFSYQITVDADSAFQVVGAVLQSRIQYNFEAKASYQVTIRSTNTKYGGSLDKTFTINVIDVNEAPTDIVVSSLSINENSASGSVVGTLSAVDPDAANTHTFTLVSDAGGKFSISGNSLRSTAAFNYEATTSFSITISVKDQDNMSTQKTFTINVLDLNEPPTDISLTASVVQENLAAGTTVGTLAALGDPDANEAFTYSTASTFFSIAGSTLKTSAQFDFEARSSYTVDVLATDKGRNSISKTFTIQVQNANEAPTGVTLSALVINENTIGTVGTLATTGDPDSGDTFTYAIVTNPSSVFGITNGQLVTVSKLDFETKSSYTVRISTTDAGGLSVAADFVVTVNDVNEAPTSVTLSAQTVSEIATVGTIVGNLAWADVDAADAVTLTLTTNPNGAFAITNNNALVTAAILNFAVKPSYAIVITGTDKGGLTFVLSATITVTFVNKVPTGITLTASTVAENSVSTTIGTLAAIGSFPPDSTFSYALKVNPGTSFSISNNQLVTAKALNFEVQSSFTVTVTVTENKFGGTFDKDFVVTVTDVNEAPTAVSLSSTTINENLAIGTTIGTLTSTDQDSGNTFTYTIETDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDWDADIDGPGQRKHVHVHDRDGRVECV* # PASA_UPDATE: g14098.t1, single gene model update, valid-1, status:[pasa:asmbl_7569,status:12], valid-1 NODE_473_length_23079_cov_57.5019 . gene 51 1406 . - . ID=g14098;Name=g14098.t1 NODE_473_length_23079_cov_57.5019 . mRNA 51 1406 . - . ID=g14098.t1;Parent=g14098;Name=g14098.t1 NODE_473_length_23079_cov_57.5019 . five_prime_UTR 1305 1406 . - . ID=g14098.t1.utr5p1;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . exon 1239 1406 . - . ID=g14098.t1.exon1;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . CDS 1239 1304 . - 0 ID=cds.g14098.t1;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . exon 845 1078 . - . ID=g14098.t1.exon2;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . CDS 845 1078 . - 0 ID=cds.g14098.t1;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . exon 51 646 . - . ID=g14098.t1.exon3;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . CDS 440 646 . - 0 ID=cds.g14098.t1;Parent=g14098.t1 NODE_473_length_23079_cov_57.5019 . three_prime_UTR 51 439 . - . ID=g14098.t1.utr3p1;Parent=g14098.t1 #PROT g14098.t1 g14098 MGIRGTMSGLVLAICMAAFMSETSASGVFQVVFRSFSTYNGYKCSSLGFSCDVYVKICPFMDASNNCMGSVCVSDVLQDSSNSFTKTYSCLYAIGAGKWPNYAKFSIEAWDSIAIWTDSKIDSIVHTSSTFGASNGMASFDNIAGSSSHAKMSFSYYLMVSFSPSYCG* # PASA_UPDATE: g14100.t1, single gene model update, valid-1, status:[pasa:asmbl_7572,status:3], valid-1 NODE_473_length_23079_cov_57.5019 . gene 3618 6000 . + . ID=g14100;Name=g14100.t1 NODE_473_length_23079_cov_57.5019 . mRNA 3618 6000 . + . ID=g14100.t1;Parent=g14100;Name=g14100.t1 NODE_473_length_23079_cov_57.5019 . five_prime_UTR 3618 3851 . + . ID=g14100.t1.utr5p1;Parent=g14100.t1 NODE_473_length_23079_cov_57.5019 . exon 3618 5452 . + . ID=g14100.t1.exon1;Parent=g14100.t1 NODE_473_length_23079_cov_57.5019 . CDS 3852 5452 . + 0 ID=cds.g14100.t1;Parent=g14100.t1 NODE_473_length_23079_cov_57.5019 . exon 5580 6000 . + . ID=g14100.t1.exon2;Parent=g14100.t1 NODE_473_length_23079_cov_57.5019 . CDS 5580 5754 . + 1 ID=cds.g14100.t1;Parent=g14100.t1 NODE_473_length_23079_cov_57.5019 . three_prime_UTR 5755 6000 . + . ID=g14100.t1.utr3p1;Parent=g14100.t1 #PROT g14100.t1 g14100 MVVQPSGSEVSFACWAANDSESQSQGEPRPSAGVAMAGTEKDAREIIKDRLYFVTVRGQPQPTPSAHYFCIDDELVYEGFYADFGPLNLAMLYRYCVLLQKKLDIPALKDKIIYHYTRFDGAKRANAACLIGLFSVIYLKRTPEEAYKPFIGIYPPLQPFRDASYGPSTYNLTLLDCLRGVYKAMRCNFLDFDNFNLEEYEYFERVENGDLNWIVPGKFIAFCGPHSTNSSEHGYPTLTPQDYVPYFSAKGVTAVVRLNKKMYDRRRFTSAGFKHYDLYFLDGSTPSDKIVQSFLEIAEGTDGVVAVHCKAGLGRTGSLIACYMIKNYRFTASEAIAWLRICRPGSVIGPQQLFLQEIQAKLWRMSSIHGDAFSHQSGGLGVMHQQQQSSSSSVAAAAGAKVRGTQSRGSIDNLSNGMDSMRLEEGGGHARYPHSSFPIQQRFEQSASSQYSSVSRQQPQYSETNFVSSVLLDGPSASMKIRRPHTSPYSSDGMGMSASVGDLQPRHMRSATTGAINPSVVATRSRTQTQPAVRVGTSTVAAVVPTPSKMTRVSRAKSANSARRIGAPVGSSFESRVYGYNGITVASGARR* # ORIGINAL: g2210.t1 original gene structure, not modified by PASA NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS gene 1717 3546 . + . ID=g2210;Name=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS mRNA 1717 3546 . + . ID=g2210.t1;Parent=g2210;Name=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 1717 1988 . + . ID=g2210.t1.exon1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 1717 1988 . + 0 ID=cds.g2210.t1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 2140 2287 . + . ID=g2210.t1.exon2;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 2140 2287 . + 1 ID=cds.g2210.t1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 2528 2736 . + . ID=g2210.t1.exon3;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 2528 2736 . + 0 ID=cds.g2210.t1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 2948 3030 . + . ID=g2210.t1.exon4;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 2948 3030 . + 1 ID=cds.g2210.t1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 3136 3239 . + . ID=g2210.t1.exon5;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 3136 3239 . + 2 ID=cds.g2210.t1;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS exon 3397 3546 . + . ID=g2210.t1.exon6;Parent=g2210.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant AUGUSTUS CDS 3397 3546 . + 0 ID=cds.g2210.t1;Parent=g2210.t1 #PROT g2210.t1 g2210 MGRRVIHPVTSVGATVRAMSVGTNRSPFPAQGRPQPQPQQQPNRMQQQQQPQQQQQQQQQQQGQQGQRAPGSPPPVVVDLTTQNAQQIMQSPSAIIIYAFSSRAPSSQELGAKLEKLALQAEGRFLLARLNCDTQSQLAQALRIPALPAVFLRNEGKLQPLYVHQSPDPIPNGVLATFVQQLRRAFNMKDDLQEALVDAGRLLDKDRNPAGAETAFAALYNHKDATMPHKAIALAGLCRSYIAQNKVDGARKAMEDLKKNFVPELALPEVRQALAALDLLIEAKGDLPADELNIIRAADESNMDVGLRHARAVFVAGGHDKA # PASA_UPDATE: g2209.t1, single gene model update, valid-1, status:[pasa:asmbl_5884,status:12], valid-1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . gene 194 1125 . - . ID=g2209;Name=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . mRNA 194 1125 . - . ID=g2209.t1;Parent=g2209;Name=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . five_prime_UTR 880 1125 . - . ID=g2209.t1.utr5p1;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . exon 810 1125 . - . ID=g2209.t1.exon1;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . CDS 810 879 . - 0 ID=cds.g2209.t1;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . exon 454 563 . - . ID=g2209.t1.exon2;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . CDS 454 563 . - 2 ID=cds.g2209.t1;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . exon 194 280 . - . ID=g2209.t1.exon3;Parent=g2209.t1 NODE_3314_length_3759_cov_36.8051_potentialcontaminant . CDS 194 280 . - 0 ID=cds.g2209.t1;Parent=g2209.t1;3_prime_partial=true #PROT g2209.t1 g2209 MVVTLLTGSRSLGHVSNYDASMQVIVRLDDPLRGVGGVSTAKTDLLSLCLYLDTLYRRQATRTNDPAVEETIEKIVEILQKLPDRPSFK # PASA_UPDATE: g4719.t1, single gene model update, valid-1, status:[pasa:asmbl_7046,status:12], valid-1 NODE_4162_length_2093_cov_55.1006 . gene 367 1970 . + . ID=g4719;Name=g4719.t1 NODE_4162_length_2093_cov_55.1006 . mRNA 367 1970 . + . ID=g4719.t1;Parent=g4719;Name=g4719.t1 NODE_4162_length_2093_cov_55.1006 . five_prime_UTR 367 370 . + . ID=g4719.t1.utr5p1;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . exon 367 629 . + . ID=g4719.t1.exon1;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . CDS 371 629 . + 0 ID=cds.g4719.t1;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . exon 1067 1162 . + . ID=g4719.t1.exon2;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . CDS 1067 1162 . + 2 ID=cds.g4719.t1;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . exon 1423 1581 . + . ID=g4719.t1.exon3;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . CDS 1423 1581 . + 2 ID=cds.g4719.t1;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . exon 1876 1970 . + . ID=g4719.t1.exon4;Parent=g4719.t1 NODE_4162_length_2093_cov_55.1006 . CDS 1876 1970 . + 2 ID=cds.g4719.t1;Parent=g4719.t1 #PROT g4719.t1 g4719 MDITSRSGNAAYGTGFWTSFGCNYRFTLSIALEDTGVLVFRALSTSENTCSIPLVSGNSSLCTEGTVLCGTLDQNAYCGSFKFTRIAPTATLTATATPAPTNPSTPNTGLIDTFDDTNVTTYTYFFGRNVQGMPNADKTDAVLVPYPLAGPLTGMSMGSASISQLHGVIRSAAGLIGSWGFNGNGQVCANGSLRLFLNHCIL* # ORIGINAL: g7314.t1 original gene structure, not modified by PASA NODE_2552_length_5916_cov_35.7134 AUGUSTUS gene 248 2258 . - . ID=g7314;Name=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS mRNA 248 2258 . - . ID=g7314.t1;Parent=g7314;Name=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 2095 2258 . - . ID=g7314.t1.exon1;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 2095 2258 . - 0 ID=cds.g7314.t1;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 1793 1892 . - . ID=g7314.t1.exon2;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 1793 1892 . - 1 ID=cds.g7314.t1;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 1250 1397 . - . ID=g7314.t1.exon3;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 1250 1397 . - 0 ID=cds.g7314.t1;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 248 921 . - . ID=g7314.t1.exon4;Parent=g7314.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 248 921 . - 2 ID=cds.g7314.t1;Parent=g7314.t1 #PROT g7314.t1 g7314 MLRRGSAVYHVFAPNTNVGKTLISAALARTAARVGHRVMYLKPVQTGYPQDSDSRFVSRFLRKWEGGVTIQTLVNYKDPVSPHVAATREGENIISDSALVKLVGDAIDKFGRPDVPTKALGFGLVEGAGGVLSPAPSGSLQADVFRPLRLPVVLVGDHSLGGISATISAAESLLLRGYDISLVVMANGQHGNASAISKHLSSIVKSKRPLVYTVSDFPARNATEDADTASLTAWIDGNKGFIESVRALEEWHDEKVASLDGLASRAQDVLWWPFTQHAHPGPTTTIDSACGDALVAKTWKGDVGAENAIDDDVMLGSLDDSVGSWWTQGVGHGSPGHALAISGASGRYGHVMAPEIAHEVL* # ORIGINAL: g7315.t1 original gene structure, not modified by PASA NODE_2552_length_5916_cov_35.7134 AUGUSTUS gene 2975 5510 . - . ID=g7315;Name=g7315.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS mRNA 2975 5510 . - . ID=g7315.t1;Parent=g7315;Name=g7315.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 4362 5510 . - . ID=g7315.t1.exon1;Parent=g7315.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 4362 5510 . - 0 ID=cds.g7315.t1;Parent=g7315.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS exon 2975 4057 . - . ID=g7315.t1.exon2;Parent=g7315.t1 NODE_2552_length_5916_cov_35.7134 AUGUSTUS CDS 2975 4057 . - 0 ID=cds.g7315.t1;Parent=g7315.t1 #PROT g7315.t1 g7315 MSGDNALPPQHGDWSLVQQLNAGGLHEMHTNPQQQQQQPQYHHVGGAYGAGSFQQMAPRPPLPSNSQHPPVYHPHGYPRPPTPAVAYSQPQQQTYPQHQHQHQHQQHQHTFPSRPPRPVGGLLPTPQPMQQQPPFQHFNPPAMPPSLPQTQPSSQQNTREIKARGSVLIVRHLPTDMSNDDKIVFFRHFGAESVECMNAQGRLRNAAFVHFSSEDRAASALVRLHQLIVSGRPLTAEYARAGHVKQLPTEPVPIQGTSITKKAECMAVVGGGGDKDDAHSDDVAMEASVPDEGRRKRQRDAGASSATVLPPPPPQPIAAGLGFNFPANASLEYAYPPPTEATIMNIAHTLVAVSKFYVQVLHLMNKMNLPPPFGELTPAPPMMSGCDVTGVPPPPPQRDSLLSSDESEYESDDETQLRSVKRRKTGRGVASPQHRHPGLPTTAQHPPTSTPNRHQPLSALDQMLANALRPKLASAAGAGSHVGAIPPSGAPVSHAAIIDSIGGGVRYSAALESGEHPHSHTVAHAATPIAAAPIASVAGENGAHVLSSDTTTTAAVTATASSDGTLDAMPVVSGVTSQQPPPRSFAVDVPPDAMSREEVVAGRATDETLAGMSAFKSYSAGEPTNRLYVKNLAKGVTEADLARVFGRYAQTSGNNNTTINKSISGEVAGAAAGEASCLVSDITAAALEVQLFREGRMKGQAFVTLPSAEAAAQALADAHGHVVHGRPMSVQFARAAASAPKTT* # ORIGINAL: g12725.t1 original gene structure, not modified by PASA NODE_1478_length_11051_cov_39.6633 AUGUSTUS gene 8196 10784 . - . ID=g12725;Name=g12725.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS mRNA 8196 10784 . - . ID=g12725.t1;Parent=g12725;Name=g12725.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS exon 8196 10784 . - . ID=g12725.t1.exon1;Parent=g12725.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS CDS 8196 10784 . - 0 ID=cds.g12725.t1;Parent=g12725.t1 #PROT g12725.t1 g12725 MWGEDSDDEGPPPEDEKKEKGASMSGGEKESELAAKTEEDEPGKKEKDKKKDKQKSTDKQDTDAQPEDAPEEGEAGGEDGGEDEETADPINEDTSDKYEENHGIGIQPTPVVDEGGDGDDELPDNMSIDDGGDAADEGDGGPSDDAQLDMSEDADDKDGSGEDGAEDADMDRDAPPEEFPEVENPDAGDESGRDVDRGAMEMDENAEANEGNGDENNDEHSPQPQPTLTAEPMGEAAEDNKAAGLEAAETEAAPTGDETKAANEMPLGVSSDVGGMGEASAQPVVRRDGGGGAEDPAPSAQMQQSDGDRGKGTWQRTQQEQSASKKDAPKKQPPHSRQQEEVNPYRDVGSLLDKWRDRLKMVEREASEDAPAEEIGGKESDDAMPMEEEAFEFTKKGDTDATAQTLAAATDDQLEAQRDEAEAMQVEPQSKAEDDGLNPNGDAPEEQKPEAPQDGGGAEAPNEAEARGKEPPSMASRRHQQRKRKDVSESEEQPPTKKGKGVDNGDGADDSAANIRDDSVVMADRFAADVKIGEDPSRTAGDDALNDEDTAMEVEAAMELLAGTDADNNGGSRSEGERLWQKYEGATSGLSQELCEQLRLILEPTLATRLRGDYRTGKRLNMRRIIPYIASDFKKDKIWLRRTRPSKRQYQVMLAIDDSTSMAHKQASQLALKSLALIGRALARLEVGEMSVCSFGEEVKVLHPFNRAFTDDAGADVVSKFTFDQERTDFAQLMRSGVNVLRASRPNGGGAAGTFKGGVSQLMVIISDGTIVDETKEITKWIAEARDDGILPVFVVIDDPRADHSVMDVLHVTYPGGVLTVARKLDLFPFPYYVILRDINSLPDVLSDALRQWFEIMAASDE* # ORIGINAL: g12724.t1 original gene structure, not modified by PASA NODE_1478_length_11051_cov_39.6633 AUGUSTUS gene 4614 7636 . + . ID=g12724;Name=g12724.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS mRNA 4614 7636 . + . ID=g12724.t1;Parent=g12724;Name=g12724.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS exon 4614 5411 . + . ID=g12724.t1.exon1;Parent=g12724.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS CDS 4614 5411 . + 0 ID=cds.g12724.t1;Parent=g12724.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS exon 5804 7636 . + . ID=g12724.t1.exon2;Parent=g12724.t1 NODE_1478_length_11051_cov_39.6633 AUGUSTUS CDS 5804 7636 . + 0 ID=cds.g12724.t1;Parent=g12724.t1 #PROT g12724.t1 g12724 MTKPLPRTRRASVTGSSIADGESGRTNLKRKTGGDTNDVRFPVETRALGPSAPQLSGGDRYYGGLGIERESCFDQSLPSENSEQRLGACQDSLVTTVCVTLACVVDDRSSYGCIEGEQSESAVFDAAEGFTSKAIGSCPALATDFHTIDSSCDETLSTANSDEVFGVLTKRPCSTETSSAPSHSTTHACVKLQADVEYDCRIPEDSSAAVDIHYSQCPERPPQTYAELIIGCIEDSPARGLSLKDIYASIRKNYAFYRQMNPSRFEAQVRHNLSLHRCFRRDSHRTTPNPLIPRTRGHLWRVDQSIPITATTRGPRQSRSSVGSSRRNSILTGQNGVAAEPSRPVSRASRAHYDASALPSSGQQSTQHDTSDDVTGARHQPPLPTALSEFNGEAHFANHSAAVSVSPANTLTAPVSDVSDASAAMELDDGYGRVSASIHDVAIDCDGHGQGLVLESACGNPGSGLRRLSFVSLESSTGSSDDVYYTSTPQSDCDDHNLFMDSDLDHELQLDGDAIERAFDAFSDGETLRHPANGHGSDSGDHDGCGGIGSTTTDILGHGSHQATDTALATNCMPPDHSVIVEFGDMAATVRIDEPHDQSETPSAIARSYVGHCHGDGNNLKASREWMGWSHTLSDTPTEESDSRIEDSRIEAPRPGRVGSIRWAQPLSCADFRIDNAGNRNKSSAYDSHSAGKQPNNQITIFGAAIPCSGGLDNGKEEPPTTGLITYPVTVTATTSDACQGACRTLQSPQGQSTANPACMPLHTTEINAACESDLHGARVAAIESCTARYAEIVMDRGARLVCASVQGGWNAYSGNDNHALPAQSLYEGMQPVAVCDAQVQWASSESHENPGLTSFPFSHISLAVVALPTDRDGRD* # PASA_UPDATE: g12723.t1, single gene model update, valid-1, status:[pasa:asmbl_1711,status:12], valid-1 NODE_1478_length_11051_cov_39.6633 . gene 140 1861 . - . ID=g12723;Name=g12723.t1 NODE_1478_length_11051_cov_39.6633 . mRNA 140 1861 . - . ID=g12723.t1;Parent=g12723;Name=g12723.t1 NODE_1478_length_11051_cov_39.6633 . five_prime_UTR 1781 1861 . - . ID=g12723.t1.utr5p1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . exon 1741 1861 . - . ID=g12723.t1.exon1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . CDS 1741 1780 . - 0 ID=cds.g12723.t1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . exon 1365 1450 . - . ID=g12723.t1.exon2;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . CDS 1365 1450 . - 2 ID=cds.g12723.t1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . exon 952 1071 . - . ID=g12723.t1.exon3;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . CDS 952 1071 . - 0 ID=cds.g12723.t1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . exon 591 662 . - . ID=g12723.t1.exon4;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . CDS 591 662 . - 0 ID=cds.g12723.t1;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . exon 140 211 . - . ID=g12723.t1.exon5;Parent=g12723.t1 NODE_1478_length_11051_cov_39.6633 . CDS 140 211 . - 0 ID=cds.g12723.t1;Parent=g12723.t1;3_prime_partial=true #PROT g12723.t1 g12723 MSLTRVFALVLLTVTLVQVSIVDAQGCNATASTVCISCAPPLVLCAATRKCVSPVAAPCNATGNTTTDISTCFNATCCPSPNVFCPSVGKCLAANTNCAAQCNGSQAYCVRVGRCLELALNCATACNGTD # ORIGINAL: g8364.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 21737 26534 . + . ID=g8364;Name=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 21737 26534 . + . ID=g8364.t1;Parent=g8364;Name=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 21737 21870 . + . ID=g8364.t1.exon1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 21737 21870 . + 0 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 22029 23525 . + . ID=g8364.t1.exon2;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 22029 23525 . + 1 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 23724 24025 . + . ID=g8364.t1.exon3;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 23724 24025 . + 1 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 24187 24296 . + . ID=g8364.t1.exon4;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 24187 24296 . + 2 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 24608 24694 . + . ID=g8364.t1.exon5;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 24608 24694 . + 0 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 25129 25218 . + . ID=g8364.t1.exon6;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 25129 25218 . + 0 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 25349 25509 . + . ID=g8364.t1.exon7;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 25349 25509 . + 0 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 25639 25828 . + . ID=g8364.t1.exon8;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 25639 25828 . + 1 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 26041 26153 . + . ID=g8364.t1.exon9;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 26041 26153 . + 0 ID=cds.g8364.t1;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 26339 26534 . + . ID=g8364.t1.exon10;Parent=g8364.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 26339 26534 . + 1 ID=cds.g8364.t1;Parent=g8364.t1 #PROT g8364.t1 g8364 MKTTQPIHPFSDEKENSNVPRNKAPVLRPSAPALGHNIEPHAQHRPPSQQRSVGHAGEGAEEPTLAPNERLGYNKDALFVGATEHCFEELRAFRWAGGCPLHHKKKSAALKGKEKKPPVQSSAPATAHASAVTAPAPPAQTHSREELPRAPAPSGRAPATVPFFPPQPFAASRDAVSASPAPLQQRGPLAALQEQSPFGTPSFGAGFMGRPPLAPRSAQPAPVAPPLQQQHAIGAPTNPARPPTQSATPVFTGRPFTMDNSGYALSQPSPTVNTKAAMNTVLGWFSGDIEGDAPSADPSPLALGFRENSPAPPVHAMSAQKQPSRPAFEIFSDHNAMAAPQQQQRGQQARGAPFQPAFEIYTEEQPALKPPVSQQKPSFSIFSDNAVPTTTAQTHVPPTRKALAPRDLVPSFNAANPQGTQHGALPDAKFGMRAEEQPRVVAAAPPRFNPHFDDSDDDKDDDALGGADENINPENGMWTGTHRSISHTLPADIDARALRPAAGHTVTADIDMNDPANYFEVSDDEEGAEGDELLDSIAPPAPLDDEPFEIYEDPAAAMAPMATPSTRAPAYTATDDFGMSNLRVNETKHAQKTQQQQDTVNPFSPSEVARLVSAIGPLGRLLAGVDDRHTDSAPPIAANATVLLGGRHYAVDREFGSGAFARIFLARKLHSDDDEESYAFKVQRPACPWEYYVIRELRQRVSEARFEQRMMDCFVEAHNIHIYRDASVIIMDEHDQGSLLDVVNVYARNGKSMDESLVMFYTIEILRMVEHMHACRILHGDIKPDNLLVRSDENESLSITWNPSGDGGWSGIGLVLIDFGRSVDLQLYPQGTLFRGSSDTESFQCIEMQEDRPWLYQADTYGLLGCIHCLLFNKYMAVAKNPTTGRWCLAEKFKRYWQVDLWERLFDTLLNTPHDAVGAAAPLSQLRASFESYLVGNAYKAKTIKSLLCKQDIMMYESR* # PASA_UPDATE: g8356.t1_g8357.t1, single gene model update, valid-1, status:[pasa:asmbl_9671,status:3], valid-1 NODE_84_length_42661_cov_60.0957 . gene 5949 10248 . + . ID=g8356_g8357;Name=MERGED%3A%20g8356.t1 NODE_84_length_42661_cov_60.0957 . mRNA 5949 10248 . + . ID=g8356.t1_g8357.t1;Parent=g8356_g8357;Name=MERGED%3A%20g8356.t1 NODE_84_length_42661_cov_60.0957 . five_prime_UTR 5949 6063 . + . ID=g8356.t1_g8357.t1.utr5p1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 5949 6220 . + . ID=g8356.t1_g8357.t1.exon1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 6064 6220 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 6415 6531 . + . ID=g8356.t1_g8357.t1.exon2;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 6415 6531 . + 2 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 6815 6981 . + . ID=g8356.t1_g8357.t1.exon3;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 6815 6981 . + 2 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 7303 7449 . + . ID=g8356.t1_g8357.t1.exon4;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 7303 7449 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 7663 8070 . + . ID=g8356.t1_g8357.t1.exon5;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 7663 8070 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 8316 8447 . + . ID=g8356.t1_g8357.t1.exon6;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 8316 8447 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 8950 9020 . + . ID=g8356.t1_g8357.t1.exon7;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 8950 9020 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 9396 9519 . + . ID=g8356.t1_g8357.t1.exon8;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 9396 9519 . + 1 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . exon 9776 10248 . + . ID=g8356.t1_g8357.t1.exon9;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . CDS 9776 10012 . + 0 ID=cds.g8356.t1_g8357.t1;Parent=g8356.t1_g8357.t1 NODE_84_length_42661_cov_60.0957 . three_prime_UTR 10013 10248 . + . ID=g8356.t1_g8357.t1.utr3p1;Parent=g8356.t1_g8357.t1 #PROT g8356.t1_g8357.t1 g8356_g8357 MSRLYDTVEPTVIDEDVLRRAVQEQTAAERAEVTKKEGLDYRDVKCLRLDFKNILKIDNLWQFENLTKLQLDNNIIEKIENLDSLVNLEWLDLSFNNIQTIEGLDKLTKLTDLTLYNNRISRLENMDSLVSLNVLSIGNNNLETLENLTYLRRFETLRCLNLAGNKFCQDPNHKSFAIAILPGLKYVDFRLIEEHARTSAADQYQEETLELEIKEREEKDRREKEKEHQGLLQRHKDAYVEGLIGDDFFADMLLEDPEYVKLSALPESQPLYDEYRGRFVVVCTETIDHALRQHDARTHELEQFTRCIGRAMEENRREAAKNIEAFQSVRKKLLRDIRKSNDPKTTEMLVQTLRDHIRGLWTSLMGLEMELVDQLEDVVKEFERNMSDLTTAFVEQIQGHVVQLRELENNHHVRVSELATSTMETFLKNEIEGEIPEELRQLFVDKDTLANILNASHDAHLGKIDGKEDEIVTRANRRLDEIVGKVHLDELTRNRHRVAEIGALIDHFGADTEHDDMED* # ORIGINAL: g8365.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 27613 28311 . - . ID=g8365;Name=g8365.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 27613 28311 . - . ID=g8365.t1;Parent=g8365;Name=g8365.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 27613 28311 . - . ID=g8365.t1.exon1;Parent=g8365.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 27613 28311 . - 0 ID=cds.g8365.t1;Parent=g8365.t1 #PROT g8365.t1 g8365 MSDFDRNFFIADPLRVLPRARITECDTASSASGASNKKQRTEKFKYEQSSPELTVPDAEMALEDCAGHVDVCIVPLGRHANGGKPREALRGGDGWKSNGAQQIDLLNNADIKWIKVDRNLQDGVACVPRTDRIPSGADESAAAKQVNNTWLFDNPQVSWGFQPRPPCAKQKHRIAKQSVPVFDRGCIQGHAATAATAAAARRCKKARFTDGEAQLTISSAVVCAWKDAVVAV* # ORIGINAL: g8359.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 11530 13245 . + . ID=g8359;Name=g8359.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 11530 13245 . + . ID=g8359.t1;Parent=g8359;Name=g8359.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 11530 12583 . + . ID=g8359.t1.exon1;Parent=g8359.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 11530 12583 . + 0 ID=cds.g8359.t1;Parent=g8359.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 12689 13245 . + . ID=g8359.t1.exon2;Parent=g8359.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 12689 13245 . + 2 ID=cds.g8359.t1;Parent=g8359.t1 #PROT g8359.t1 g8359 MPPALLALLLALLVATAVIAPIVPESDAVDAERDVTCDAMGNCGSDDVEWMLNPLAGASDTASRDADGEFSSGNDECCEAGDKVGGIAGVDGVDGVTGVGGVDGVVSVGGVDGVVSVNGVGGVVSVGGVDGVVSVGSVDGVDGVDGVVSGNGVGCVDGVDAALVPSTEKEREPGDAGIMSAEVNTAMYDCGGITTAEAAACVSVGDNKGTRVVAGVVIAPTNDVCVALTPAAVDACVAGEYVAGVVIAPTNEGCVALTPAAVDACVAGEYVAAVEVLAALCVEVGSAFGAMNDDVAICSCADDDNALPLDATLDTATSGTREDVETTDSDEAGVYDDALRLDIEITGSDATAAGKPAVADGVADAVEPAPGGTMGLRGGSAVAVTCALPMVDRTIVASVCVIVDDAVICRADGVTWDIVAVDSNPPCALTSVCADAIPATVDVRIAACVDVRIAACVDVRIAACVDVRIAACVDVRIAACVDVRIAACVDVRIAACVDVRIPATVDVRIAACVDMNTADAFTVCALTVAPCVVCES* # ORIGINAL: g8358.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 10380 11333 . - . ID=g8358;Name=g8358.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 10380 11333 . - . ID=g8358.t1;Parent=g8358;Name=g8358.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 10380 11333 . - . ID=g8358.t1.exon1;Parent=g8358.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 10380 11333 . - 0 ID=cds.g8358.t1;Parent=g8358.t1 #PROT g8358.t1 g8358 MDGDVTPWSRDANTGSELSPLSVMSMQSQSMQSQRVTSVAVNTAASPTASATAISPSSHASALAAATASSLSHGGASISTSSVFANSYPSTSSLAPKPKTTATDLWSATVDGSRVATGSALATDAHTTMSVGVQTVLSSPVLDAPTATPRTPTAVPSRDPGTSVGDGVHTAASATPGNEPYPRLSSSETKSEGPFATPSSEKSESTSTVAIITSGGIGTAWKTSSASDPPLPTLPTQRLDAPNTSGGSSGGGDNKALIIGVAVAVAVACGICLAAVLAYKGGLRVVGRASSGMWSGGYEPGSLNSGMDLLGVSMTEV* # ORIGINAL: g8354.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 1265 1843 . + . ID=g8354;Name=g8354.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 1265 1843 . + . ID=g8354.t1;Parent=g8354;Name=g8354.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 1265 1843 . + . ID=g8354.t1.exon1;Parent=g8354.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 1265 1843 . + 0 ID=cds.g8354.t1;Parent=g8354.t1 #PROT g8354.t1 g8354 MYIMADKFCLGMALKYGTHVVGFDSSARNKTVYLCGHSTRIVVAVCGLWDCRARRARTVAAVCGPWDCRARRARTVAAFWGPWDCRARRARTVTASWGPWDCRACRARTVATVCGPWDAVHAVQGLSPLFAVPGTAMHATQGSSPPFVVSGTAAHAVQGLSPPFGPLGLPRTPCKDCRRPWDCSARHTRIVV* # ORIGINAL: g8360.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 13357 14710 . - . ID=g8360;Name=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 13357 14710 . - . ID=g8360.t1;Parent=g8360;Name=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 14302 14710 . - . ID=g8360.t1.exon1;Parent=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 14302 14710 . - 0 ID=cds.g8360.t1;Parent=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 13931 14116 . - . ID=g8360.t1.exon2;Parent=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 13931 14116 . - 2 ID=cds.g8360.t1;Parent=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 13357 13574 . - . ID=g8360.t1.exon3;Parent=g8360.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 13357 13574 . - 2 ID=cds.g8360.t1;Parent=g8360.t1 #PROT g8360.t1 g8360 MHSTHMHTLPTLVCAALALQWAVHGTVAQVTAVVGDFTATAGDASGTLDWQGGTTIRVAYASLDGISPLRAVLIDDAGHEMVCGRPAFTPSGVTCVAPAWNPDWRAGSADQNSRPVSVKVIGKQGWIVFPTLWKFSYHCVDNMYYCAVDCAGLHLCLRGVITARVTCDSQRPFCTVKGLLAFILGLLPGSKEKSQCYAARTTSQCSDKNSASSNNSNNIIGSCASARGSERGDLRIKNKHTHTRRSACNRKLNESSYCSRDFRNAQCTED* # ORIGINAL: g8361.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 15577 17469 . + . ID=g8361;Name=g8361.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 15577 17469 . + . ID=g8361.t1;Parent=g8361;Name=g8361.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 15577 17469 . + . ID=g8361.t1.exon1;Parent=g8361.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 15577 17469 . + 0 ID=cds.g8361.t1;Parent=g8361.t1 #PROT g8361.t1 g8361 MRTGLAWAYAARRVCVRRVAGVAASPTTRSPLSSLAMHRNVVAVEHAHGSALERAMGAWAPGQIRTMTTEAERSRLDIVLHLAGSGVSLDNLRGPIDELRAEGLLSHAPACNRILGRFAARGDQRSAVEFVQWMEHAGIAPTTLSYTHVLESMRTAPRPTVGHSVLRALEARNMLISPALHGRILALHASANDEEGLFAHAATVTRAGLPLHVYGMASALLMRRRQRNTAAGVVGAEDLAVDALALEELKRGESEDGDVGAPAGKVEQVERMEQVERVGEPALFDSLLARCLQEETASRAAVVTESSPMAAIHDDARWMVTRLRSIGALDDARNDHAIVAAFASVRDARGAQRVHDELLGMRGGQVHGPVTSALANAYAMVGEAQRALKIVRSATNAGAEITPPTFLAIAGALEQKGDFAALTKLIYLLVARSKEAAGSADNRTVLAVATMALKLCGRTYSHWSQAALVIERLERAHIPLDRFAYNALASIRAKQRSIQGVRAIMAQMSERGVPPSTDTYNILLEAHIGIGARISDVAVAQVFAEMESLGIPKRVGTYKTALRVAAYAGNDSIIEAIFGAVQSAGFAVTPEERMHVLMRSAIVRKDSASVQRLIATELPKVNMKKCNVAR* # PASA_UPDATE: g8363.t1, single gene model update, valid-1, status:[pasa:asmbl_9668,status:12], valid-1 NODE_84_length_42661_cov_60.0957 . gene 18773 21434 . - . ID=g8363;Name=g8363.t1 NODE_84_length_42661_cov_60.0957 . mRNA 18773 21434 . - . ID=g8363.t1;Parent=g8363;Name=g8363.t1 NODE_84_length_42661_cov_60.0957 . five_prime_UTR 21421 21434 . - . ID=g8363.t1.utr5p1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 21194 21434 . - . ID=g8363.t1.exon1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 21194 21420 . - 0 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 21029 21085 . - . ID=g8363.t1.exon2;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 21029 21085 . - 1 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 20736 20874 . - . ID=g8363.t1.exon3;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 20736 20874 . - 1 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 20476 20633 . - . ID=g8363.t1.exon4;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 20476 20633 . - 0 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 20056 20303 . - . ID=g8363.t1.exon5;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 20056 20303 . - 1 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 19636 19916 . - . ID=g8363.t1.exon6;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 19636 19916 . - 2 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 19354 19442 . - . ID=g8363.t1.exon7;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 19354 19442 . - 0 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 19082 19153 . - . ID=g8363.t1.exon8;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 19082 19153 . - 1 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . exon 18773 18887 . - . ID=g8363.t1.exon9;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . CDS 18812 18887 . - 1 ID=cds.g8363.t1;Parent=g8363.t1 NODE_84_length_42661_cov_60.0957 . three_prime_UTR 18773 18811 . - . ID=g8363.t1.utr3p1;Parent=g8363.t1 #PROT g8363.t1 g8363 MDSISQRFVACTCKDMAESMETEEPRAVIGEDAGNEWELSKENVAPVKRGRKIDTLVHALKMQPTDIEREISERESEFQQELSEPCEDPLGIWTRHVTWIQQALPTGGRQWEEVLERCTRTFVHEDRYKTDARYINIWISYADCCRDADDVYSFMNANGIGTDVAALYEAWADSLEAKENMRAADEVYVLGINRNAYPLEHIKGRHAEFQTRLARHIERTMDAAADSADPRAIQPLASRASALPSAENGQPQPQSAVRPPVSVGVGVVGRGAVPMGALGMGVRPITATATANSNNNNNKKSGGFQVFVDTQFSAAPGPAPKGMAPIAAASVPGIGLSATGAKPLSWTALPSRREASKENNAAPSQWNKHTVPSAVAAPKKGPSFAVFIEEDVLKESIAKKKEEEESEDLSHASIRHRLDGPVLCPKNEQEDSTAQKHIAQLRSETAKR* # ORIGINAL: g8362.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 17949 18562 . + . ID=g8362;Name=g8362.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 17949 18562 . + . ID=g8362.t1;Parent=g8362;Name=g8362.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 17949 18083 . + . ID=g8362.t1.exon1;Parent=g8362.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 17949 18083 . + 0 ID=cds.g8362.t1;Parent=g8362.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 18416 18562 . + . ID=g8362.t1.exon2;Parent=g8362.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 18416 18562 . + 0 ID=cds.g8362.t1;Parent=g8362.t1 #PROT g8362.t1 g8362 MRRKEGTHKREKLEKAELTEKIFLAFERHQFYSIGGLEEVLDQPQAHIKETLRDLAVCVSRGPNKGKWELRSEYKTKTARGIEGSDAQSDGDA* # ORIGINAL: g8367.t1 original gene structure, not modified by PASA NODE_84_length_42661_cov_60.0957 AUGUSTUS gene 36030 39585 . - . ID=g8367;Name=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS mRNA 36030 39585 . - . ID=g8367.t1;Parent=g8367;Name=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 39487 39585 . - . ID=g8367.t1.exon1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 39487 39585 . - 0 ID=cds.g8367.t1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 38332 38999 . - . ID=g8367.t1.exon2;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 38332 38999 . - 0 ID=cds.g8367.t1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 37705 37845 . - . ID=g8367.t1.exon3;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 37705 37845 . - 1 ID=cds.g8367.t1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 37352 37428 . - . ID=g8367.t1.exon4;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 37352 37428 . - 1 ID=cds.g8367.t1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 37017 37096 . - . ID=g8367.t1.exon5;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 37017 37096 . - 2 ID=cds.g8367.t1;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS exon 36030 36740 . - . ID=g8367.t1.exon6;Parent=g8367.t1 NODE_84_length_42661_cov_60.0957 AUGUSTUS CDS 36030 36740 . - 0 ID=cds.g8367.t1;Parent=g8367.t1 #PROT g8367.t1 g8367 MARAVSLFDRLVFSFSGNLFANALCLGDVDNDGNNELVIGNVNGTLSIFKGGRSADAHHPASTTLPQQPIAPWRTCIDLGTIACVVVGDVMNVGSNQTVAVTAEGACHIFSIETSVLSPRMSVFPAWQSLLHPQMSRDNGDQSSAADYDQDSMGESARTTRTPSVSTQFTMSEQTAIPHNGINSHSGASGHGGAGAASMHPVTCDIAVNAKSLLVMDVDGDGRLELVLGRTDRVLHVYRWESPQHDGKGRLAEVRRIEVPGQIGSLSVAHTAEGRPFLIVSQPGGTYLSIDASGAIRCVWEGSEMASGDASSDTSTEIVGGLAAEMSVVPDVVAVSTLDGALSLHRGDSQLWSRQFDRQFFALGAIDLRPAYFSEGSACPAHVLVPYVPTVVAACAWDGFTCLADAAGTVATYQFEDEVCAFTAGLYATDRHLPAVIARDGEGSAAVTNNVPCLVYVTFSDSIVLCYGLSEALGGHLRMPSVVGLVGDGLLGAATERPVSPAPSIERRLLQSDASLIDASADAVTADGLRMGDPRGGDGHGEHEPSLMDPVFAAAGDGVAPLTKLDKVRALVAELPRMEAWKSMAQSKMHR* # PASA_UPDATE: g8355.t1, single gene model update, valid-1, status:[pasa:asmbl_9670,status:3], valid-1 NODE_84_length_42661_cov_60.0957 . gene 2836 5178 . + . ID=g8355;Name=g8355.t1 NODE_84_length_42661_cov_60.0957 . mRNA 2836 5178 . + . ID=g8355.t1;Parent=g8355;Name=g8355.t1 NODE_84_length_42661_cov_60.0957 . five_prime_UTR 2836 3115 . + . ID=g8355.t1.utr5p1;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . exon 2836 3468 . + . ID=g8355.t1.exon1;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . CDS 3116 3468 . + 0 ID=cds.g8355.t1;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . exon 3618 4011 . + . ID=g8355.t1.exon2;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . CDS 3618 4011 . + 1 ID=cds.g8355.t1;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . exon 4412 5178 . + . ID=g8355.t1.exon3;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . CDS 4412 5089 . + 0 ID=cds.g8355.t1;Parent=g8355.t1 NODE_84_length_42661_cov_60.0957 . three_prime_UTR 5090 5178 . + . ID=g8355.t1.utr3p1;Parent=g8355.t1 #PROT g8355.t1 g8355 MASGGDACTPVALSTAPRANANANANAISPVLAYAKLQGEDFVYYVQTLGITIGRKTQKTDDVDVDLGNSKQLSRRHARIEYNFTTRHFELKCLGKNGVVVDGVTVTPSAPPIPLSSRTVMHIGDVCVYFLLPVGVVTQSVRPVRRKPRIALPEELAAVVHDGDASAPASPTGTLSPASSAPNSPSAGPHGGSGADYRTNANAKPPFSYATLIAQAINSTADRRLTLNGIYTYILDHYPYYRKADNGWQNSIRHNLSLNKCFVKQPRPESEPGKGAFWTIEAGSQHMFADGSYKRRQRAPLRTKDDSSTIVGNVPRAKGSGGIVKRSTKLASAPSTPTGRSSHAGGREMSPSFTNPSTPEAWTRDTDSPTNGAAAALPVHVDRKRSFEGAVFEPDAKRLRTILALKTGIAQRSAPSSPTSERTPADAVAVRVRLETASATSPHTATVMELPAPAISVNAPVGGGPELSTDPPTG* # PASA_UPDATE: g8366.t1, single gene model update, valid-1, status:[pasa:asmbl_9672,status:3], valid-1 NODE_84_length_42661_cov_60.0957 . gene 28864 35513 . + . ID=g8366;Name=g8366.t1 NODE_84_length_42661_cov_60.0957 . mRNA 28864 35513 . + . ID=g8366.t1;Parent=g8366;Name=g8366.t1 NODE_84_length_42661_cov_60.0957 . five_prime_UTR 28864 28971 . + . ID=g8366.t1.utr5p1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 28864 29027 . + . ID=g8366.t1.exon1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 28972 29027 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 29270 29438 . + . ID=g8366.t1.exon2;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 29270 29438 . + 1 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 29548 29643 . + . ID=g8366.t1.exon3;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 29548 29643 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 29897 30018 . + . ID=g8366.t1.exon4;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 29897 30018 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 30254 30358 . + . ID=g8366.t1.exon5;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 30254 30358 . + 1 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 30552 30594 . + . ID=g8366.t1.exon6;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 30552 30594 . + 1 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 30747 30868 . + . ID=g8366.t1.exon7;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 30747 30868 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 31088 31199 . + . ID=g8366.t1.exon8;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 31088 31199 . + 1 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 31451 31532 . + . ID=g8366.t1.exon9;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 31451 31532 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 31773 31903 . + . ID=g8366.t1.exon10;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 31773 31903 . + 2 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 32121 32215 . + . ID=g8366.t1.exon11;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 32121 32215 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 32501 32589 . + . ID=g8366.t1.exon12;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 32501 32589 . + 1 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 32891 33000 . + . ID=g8366.t1.exon13;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 32891 33000 . + 2 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 33238 33330 . + . ID=g8366.t1.exon14;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 33238 33330 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 33565 33685 . + . ID=g8366.t1.exon15;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 33565 33685 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 33886 34025 . + . ID=g8366.t1.exon16;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 33886 34025 . + 2 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 34377 34532 . + . ID=g8366.t1.exon17;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 34377 34532 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 34694 34801 . + . ID=g8366.t1.exon18;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 34694 34801 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 34957 35028 . + . ID=g8366.t1.exon19;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 34957 35028 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . exon 35238 35513 . + . ID=g8366.t1.exon20;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . CDS 35238 35363 . + 0 ID=cds.g8366.t1;Parent=g8366.t1 NODE_84_length_42661_cov_60.0957 . three_prime_UTR 35364 35513 . + . ID=g8366.t1.utr3p1;Parent=g8366.t1 #PROT g8366.t1 g8366 MFAVRSIAAASRRVSLTNGAPVRHSSTAQRQMFDKILIANRGEIACRVMRTAKKMGVKTVAVFSDADKNSMHTQLADEAYNIGPASSRESYLRMDTILDVAKRSGAKAIHPGYGFLSENAEFADYCAREGVVFIGPPASAIREMGSKSASKIIMSSAGVPVVGGYHGSDQSLAKLKAEADKIGYPVLIKAIMGGGGKGMRIVERPEDFEAMLESSRREAMKSFNDDKVLVEKYLLNPRHVEVQVFADMHGDAVYFYERDCSVQRRHQKIIEEAPAPGLSDAIRAELGEAAVRAAKAVKYVGAGTVEFIMDSKTRQFYFMEMNTRLQVEHPVSEMVTGADLVELQLKIASGMPLPMKQSDIKLNGHAFEARIYAENPAKNFLPGTGPLVHLRTAEPSDTVRIETGVRQGDAVTVHYDPMIAKLVVWGPDRDSALLKLRNCLNQYEIVGLNTNIQFLSDLAGHHAFRAGDVETGFIARFNSELFPTRQPLSDSAIAQATLGLLLRENIHTTVQTPNNEDTQSPWSRANSWRMNEHYSRRISLTDNGHAVAVDATCRPDGSYSFRIEHAGRGKAAPAGVVEARGALTADGALSGHIGEQFVKANVVVYGDTVHVFGSESQFHVDIAPPAYLSASKGGDTRTSVNAPMTGKIEKVHVKVGDAVEKDAPLVILEAMKMEHVIRSPFAGVIAKINFKAGELVSQDALLVEFQKEKETPAKK* # PASA_UPDATE: g8368.t1, single gene model update, valid-1, status:[pasa:asmbl_9673,status:3], valid-1 NODE_84_length_42661_cov_60.0957 . gene 39895 42638 . + . ID=g8368;Name=g8368.t1 NODE_84_length_42661_cov_60.0957 . mRNA 39895 42638 . + . ID=g8368.t1;Parent=g8368;Name=g8368.t1 NODE_84_length_42661_cov_60.0957 . five_prime_UTR 39895 40094 . + . ID=g8368.t1.utr5p1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 39895 40097 . + . ID=g8368.t1.exon1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 40095 40097 . + 0 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 40420 40507 . + . ID=g8368.t1.exon2;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 40420 40507 . + 0 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 40775 40872 . + . ID=g8368.t1.exon3;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 40775 40872 . + 2 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 41210 41287 . + . ID=g8368.t1.exon4;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 41210 41287 . + 0 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 41449 41588 . + . ID=g8368.t1.exon5;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 41449 41588 . + 0 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 41686 41817 . + . ID=g8368.t1.exon6;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 41686 41817 . + 1 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . exon 42177 42638 . + . ID=g8368.t1.exon7;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . CDS 42177 42369 . + 1 ID=cds.g8368.t1;Parent=g8368.t1 NODE_84_length_42661_cov_60.0957 . three_prime_UTR 42370 42638 . + . ID=g8368.t1.utr3p1;Parent=g8368.t1 #PROT g8368.t1 g8368 MSADSVLEFFDNDPNGLYIAVAVVAILVVIVALVAAKFLRGPKRETVLLLGLCDAGKTALFYTLKSGKWVSTCTSMAENVASIPLDKTGRVVPVVDLPGHERLRLKNIERYSRTVKAIVFLIDSVHFPAQRRQVAELLHDVLSERTINRARVPVIVACNKSDIQTAKSVDSIKADLEKEIDTLRMTQAAAVAGQDGSSSVEFIGDKGKPFSFGQLRIALEFAQCSVKETNISRVIAFLRRVCK* # ORIGINAL: g13481.t1 original gene structure, not modified by PASA NODE_3718_length_2903_cov_40.5382 AUGUSTUS gene 382 1933 . + . ID=g13481;Name=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS mRNA 382 1933 . + . ID=g13481.t1;Parent=g13481;Name=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS exon 382 552 . + . ID=g13481.t1.exon1;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS CDS 382 552 . + 1 ID=cds.g13481.t1;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS exon 782 962 . + . ID=g13481.t1.exon2;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS CDS 782 962 . + 1 ID=cds.g13481.t1;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS exon 1277 1471 . + . ID=g13481.t1.exon3;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS CDS 1277 1471 . + 0 ID=cds.g13481.t1;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS exon 1748 1933 . + . ID=g13481.t1.exon4;Parent=g13481.t1 NODE_3718_length_2903_cov_40.5382 AUGUSTUS CDS 1748 1933 . + 0 ID=cds.g13481.t1;Parent=g13481.t1 #PROT g13481.t1 g13481 IVAVIDNGGGFSEACYVPEAVAIKLPAEIDFERAAAIAVSYGTAYVGLTRRANVQKGETVLITAAAGGVGLAAVDIAKNVLGARVVAVVGGAAKAKYAADKGADVVLEYADLKKKEKVMAATNNKGANVVFEVVGGETFSDCLRAIAWEGRIVVIGFASGDIPQVPANILLVKNCSVLGLYWGAYGKANLTVLRDSIEQCVKLCAEGKLSPVVYKTYALDSVNEAFKALAGRESVGKVVIRMR* # PASA_UPDATE: g3103.t1, single gene model update, valid-1, status:[pasa:asmbl_7481,status:12], valid-1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . gene 90 1099 . - . ID=g3103;Name=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . mRNA 90 1099 . - . ID=g3103.t1;Parent=g3103;Name=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . exon 662 1099 . - . ID=g3103.t1.exon1;Parent=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . CDS 662 1099 . - 0 ID=cds.g3103.t1;Parent=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . exon 475 501 . - . ID=g3103.t1.exon2;Parent=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . CDS 475 501 . - 0 ID=cds.g3103.t1;Parent=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . exon 90 318 . - . ID=g3103.t1.exon3;Parent=g3103.t1 NODE_4624_length_1397_cov_38.6452_potentialcontaminant . CDS 90 318 . - 0 ID=cds.g3103.t1;Parent=g3103.t1;3_prime_partial=true #PROT g3103.t1 g3103 MTKHAQKTKGKVPLEVSDDDEVASGESSSADDRKSKKKEKKDLGKKASKERGGSGESTHTNGDAKQSRVKKQDDEDANLPAAAPPLPVEAKSVPEAKNDSAETRGKNGASDEDIAKVEKKSVKRKGRRVDSDNDDAEEESVEPPKKVKREETTEKEASRSRQAQRSSKRAREHEEEEEDSEASDGGRAKRKQSKDKGKEKASDAKKQKTETELAAAERTKQEDKERRAKEK # PASA_UPDATE: g6913.t1, single gene model update, valid-1, status:[pasa:asmbl_1413,status:12],[pasa:asmbl_1415,status:12], valid-1 NODE_1382_length_11667_cov_55.5203 . gene 53 1844 . + . ID=g6913;Name=g6913.t1 NODE_1382_length_11667_cov_55.5203 . mRNA 53 1844 . + . ID=g6913.t1;Parent=g6913;Name=g6913.t1 NODE_1382_length_11667_cov_55.5203 . five_prime_UTR 53 53 . + . ID=g6913.t1.utr5p1;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . exon 53 307 . + . ID=g6913.t1.exon1;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . CDS 54 307 . + 0 ID=cds.g6913.t1;Parent=g6913.t1;5_prime_partial=true NODE_1382_length_11667_cov_55.5203 . exon 729 885 . + . ID=g6913.t1.exon2;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . CDS 729 885 . + 1 ID=cds.g6913.t1;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . exon 1229 1844 . + . ID=g6913.t1.exon3;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . CDS 1229 1429 . + 0 ID=cds.g6913.t1;Parent=g6913.t1 NODE_1382_length_11667_cov_55.5203 . three_prime_UTR 1430 1844 . + . ID=g6913.t1.utr3p1;Parent=g6913.t1 #PROT g6913.t1 g6913 NNNNNNNINNNTTHRQNKQEVSNVQPASRDEGAESHRSALEAAIAAYSENHYPAGVSAVYGSSSGSQITLSACLEDHKFNPSNFWNGRWRSEWIVTFTPGSGSAEIKGAAHVQVHYYEDGNVQLVTSRDFKDTLPISSPDATAKKFVELIEKAENEYQTAISENYSVMSDTIFKALRRALPITRSKLDWNKILNYKIASELQK* # ORIGINAL: g6916.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 6552 7522 . + . ID=g6916;Name=g6916.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 6552 7522 . + . ID=g6916.t1;Parent=g6916;Name=g6916.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 6552 6983 . + . ID=g6916.t1.exon1;Parent=g6916.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 6552 6983 . + 0 ID=cds.g6916.t1;Parent=g6916.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 7121 7522 . + . ID=g6916.t1.exon2;Parent=g6916.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 7121 7522 . + 0 ID=cds.g6916.t1;Parent=g6916.t1 #PROT g6916.t1 g6916 MATTAAIVNRTVTLGGHSGEVLSVAYSPDGQTVATGSGDCTARVWDAATGQCKLTLSGHSDAVASVAFSPDGRTVATGSRDETARVWDAATGQCILTLSGHSNYVCSVAFSPDGRTIATGSDDKTARVWDAATGQCKLTLMGTQVDVRQESVGGSNWMQSSRDGTTTTARSRSGFDVILTHDVALWEERLKREKEEKKRLRKGKGGARMLRREIEADRKRASERTVDLVEVGRLLQTVQSHAAAQHPCAATLTPHHVTAAKALAAFVAPLHPLCSPH* # ORIGINAL: g6918.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 8661 9164 . + . ID=g6918;Name=g6918.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 8661 9164 . + . ID=g6918.t1;Parent=g6918;Name=g6918.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 8661 9164 . + . ID=g6918.t1.exon1;Parent=g6918.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 8661 9164 . + 0 ID=cds.g6918.t1;Parent=g6918.t1 #PROT g6918.t1 g6918 MEGIEVTHRTRADYTGRLQLAVCGSHDVYKAAIDGRECALKEFSLSDGHSQAQFKREVRSLSRLSHPNIVAINAVFFENNETMGVIEMPLYPHTLDTWVAGVKPLPVRLREAMRGLLRGIEYVHREGIVHRDIKVQNVLWRRMGGLCWGTLTSARATTTGGWNPQCP* # ORIGINAL: g6914.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 2292 3205 . + . ID=g6914;Name=g6914.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 2292 3205 . + . ID=g6914.t1;Parent=g6914;Name=g6914.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 2292 2506 . + . ID=g6914.t1.exon1;Parent=g6914.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 2292 2506 . + 0 ID=cds.g6914.t1;Parent=g6914.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 2881 3205 . + . ID=g6914.t1.exon2;Parent=g6914.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 2881 3205 . + 1 ID=cds.g6914.t1;Parent=g6914.t1 #PROT g6914.t1 g6914 MRSDMSAKWVHRGRLVDDDCRTVVFVVDVDAGRRCMRRIRGCSLLLAFAGKECERFVIFVGLYALRKVPLVTGCKRPREDAAGGEERDKRRTKQEDPSVGPLKEETHRDAANGKRLGRAMQWDEQRQRKAQAKSAKAASGTTTMTQAGRQGKAQAKTGKGASGTTTMAMGGGVRGGGGE* # ORIGINAL: g6917.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 7674 8394 . + . ID=g6917;Name=g6917.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 7674 8394 . + . ID=g6917.t1;Parent=g6917;Name=g6917.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 7674 7871 . + . ID=g6917.t1.exon1;Parent=g6917.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 7674 7871 . + 0 ID=cds.g6917.t1;Parent=g6917.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 7954 8394 . + . ID=g6917.t1.exon2;Parent=g6917.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 7954 8394 . + 0 ID=cds.g6917.t1;Parent=g6917.t1 #PROT g6917.t1 g6917 MREAVKSRDAARCAFVWCAHSVLADPRFDTAAITEQIRLVDDQLERLGSQWSQIGCVVTVHIEWTRSAGAVDVAAAQLGDALTRLGGAFTGGVYADSPLGIVGLVAGLRGAIESRDACEGDAARTHCLSDDVMQRGCAAMHTLLQQSRAQLADVEGMVDRWRLRLSAEAEWEVSAVDSESGSGADDGTRCRRHSIRLSVNIILQLGQCMEPI* # ORIGINAL: g6915.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 3355 3822 . - . ID=g6915;Name=g6915.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 3355 3822 . - . ID=g6915.t1;Parent=g6915;Name=g6915.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 3355 3822 . - . ID=g6915.t1.exon1;Parent=g6915.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 3355 3822 . - 0 ID=cds.g6915.t1;Parent=g6915.t1 #PROT g6915.t1 g6915 MVSLHNLWHPRKLRVRWPAAVPVHAHAHMTPQSRPPMQTRAPAHPVTLGVRLPAEGTPMLKHVICAVTASIARVQPSQSTGRDDDSSNDHDDEGQDDEGATSKDGPHALFCTMRQKASESMTDEVVKTARSRRSLALTSAALRECLRWNAPIQTQ* # ORIGINAL: g6919.t1 original gene structure, not modified by PASA NODE_1382_length_11667_cov_55.5203 AUGUSTUS gene 10055 11134 . - . ID=g6919;Name=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS mRNA 10055 11134 . - . ID=g6919.t1;Parent=g6919;Name=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 10824 11134 . - . ID=g6919.t1.exon1;Parent=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 10824 11134 . - 0 ID=cds.g6919.t1;Parent=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 10500 10561 . - . ID=g6919.t1.exon2;Parent=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 10500 10561 . - 1 ID=cds.g6919.t1;Parent=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS exon 10055 10224 . - . ID=g6919.t1.exon3;Parent=g6919.t1 NODE_1382_length_11667_cov_55.5203 AUGUSTUS CDS 10055 10224 . - 2 ID=cds.g6919.t1;Parent=g6919.t1 #PROT g6919.t1 g6919 MTLVVHFRHRHTDQVGIPYNHNNNHNHNRNLIRNHSQWQTDATLRERRAHPHHQHSRQWQHRSPRFLTDNNNNNNNNNLQQHQLENPFARMGWDATAKMKIISGADFRHDDPRQYAPPPPPPVVRNNLRNVGQPNYAAFYGGGSGSDDESDDGSGDGSDGDYDGSDTGSDGDGGLPIKDD* # ORIGINAL: g8263.t1 original gene structure, not modified by PASA NODE_2433_length_6295_cov_40.3867 AUGUSTUS gene 2500 3078 . + . ID=g8263;Name=g8263.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS mRNA 2500 3078 . + . ID=g8263.t1;Parent=g8263;Name=g8263.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS exon 2500 2784 . + . ID=g8263.t1.exon1;Parent=g8263.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS CDS 2500 2784 . + 0 ID=cds.g8263.t1;Parent=g8263.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS exon 2995 3078 . + . ID=g8263.t1.exon2;Parent=g8263.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS CDS 2995 3078 . + 0 ID=cds.g8263.t1;Parent=g8263.t1 #PROT g8263.t1 g8263 MPPRLYAETVLAVRGVGLSLSSRRCLGLVPGRRIFLPSQWLRDVVINEGITQNSVIFYLLALVQRQHDESFAKEEKKSNEFSTSGDDYTPRLVFTEIYPRMDLLRPMYHDIRATLFEAPPRP* # ORIGINAL: g8262.t1 original gene structure, not modified by PASA NODE_2433_length_6295_cov_40.3867 AUGUSTUS gene 362 1057 . - . ID=g8262;Name=g8262.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS mRNA 362 1057 . - . ID=g8262.t1;Parent=g8262;Name=g8262.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS exon 663 1057 . - . ID=g8262.t1.exon1;Parent=g8262.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS CDS 663 1057 . - 0 ID=cds.g8262.t1;Parent=g8262.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS exon 362 491 . - . ID=g8262.t1.exon2;Parent=g8262.t1 NODE_2433_length_6295_cov_40.3867 AUGUSTUS CDS 362 491 . - 1 ID=cds.g8262.t1;Parent=g8262.t1 #PROT g8262.t1 g8262 MSSELWGNLRYQSICKLGKGSFGSVFKARDQVSGGLVALKQIALEDDGAEMAEIEKEISILKDCKHPNVVEYIGSSFFDNYLWIAMEYCGGGSCSDLLDLLDEPFGEDEIGFVMAECLKGLEYLHSCRKIHRDIKGGNVLLTDTGDIKLADFGVSAQLTNTLSARNTFVGTPYWM # PASA_UPDATE: g8264.t1, single gene model update, valid-1, status:[pasa:asmbl_4306,status:12], valid-1 NODE_2433_length_6295_cov_40.3867 . gene 3477 6193 . - . ID=g8264;Name=g8264.t1 NODE_2433_length_6295_cov_40.3867 . mRNA 3477 6193 . - . ID=g8264.t1;Parent=g8264;Name=g8264.t1 NODE_2433_length_6295_cov_40.3867 . five_prime_UTR 6106 6193 . - . ID=g8264.t1.utr5p1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 6064 6193 . - . ID=g8264.t1.exon1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 6064 6105 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 5735 5894 . - . ID=g8264.t1.exon2;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 5735 5894 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 5518 5555 . - . ID=g8264.t1.exon3;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 5518 5555 . - 2 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 5159 5254 . - . ID=g8264.t1.exon4;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 5159 5254 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 4812 4880 . - . ID=g8264.t1.exon5;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 4812 4880 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 4492 4649 . - . ID=g8264.t1.exon6;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 4492 4649 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 4096 4255 . - . ID=g8264.t1.exon7;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 4096 4255 . - 1 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . exon 3477 3858 . - . ID=g8264.t1.exon8;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . CDS 3679 3858 . - 0 ID=cds.g8264.t1;Parent=g8264.t1 NODE_2433_length_6295_cov_40.3867 . three_prime_UTR 3477 3678 . - . ID=g8264.t1.utr3p1;Parent=g8264.t1 #PROT g8264.t1 g8264 MGPEEMKEVEPHIKGLRGIFSPHTGVVDWGVVARHYGQDAKEMGCDIFLAHEVVDFSPIGTSAKISKDFSRGVVISVKDREPITARYVITCAGAYSDRLAVKSGGDREPAIVPMRGEYLLMSKEKHHLVKGLIYPVPDPSIPVLGVHFTPTIDGRVLLGPNAVLAFSREGYTYGDFNMRDVIDMFKNRGLHRLMFKHWRFGLQEVYRSIIMSAQLAELNKYIEPGLEAKDLARGPAGVRAQALDATGKLVDDFIFDEGSARGSLIHVRNAPSPAATSSLSIAKMIVDKATESFAFGQQQH* # ORIGINAL: g3313.t1 original gene structure, not modified by PASA NODE_923_length_15845_cov_40.8781 AUGUSTUS gene 10732 13111 . + . ID=g3313;Name=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS mRNA 10732 13111 . + . ID=g3313.t1;Parent=g3313;Name=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 10732 10781 . + . ID=g3313.t1.exon1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 10732 10781 . + 0 ID=cds.g3313.t1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 11392 11725 . + . ID=g3313.t1.exon2;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 11392 11725 . + 1 ID=cds.g3313.t1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 11921 11990 . + . ID=g3313.t1.exon3;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 11921 11990 . + 0 ID=cds.g3313.t1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 12311 12399 . + . ID=g3313.t1.exon4;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 12311 12399 . + 2 ID=cds.g3313.t1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 12635 12746 . + . ID=g3313.t1.exon5;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 12635 12746 . + 0 ID=cds.g3313.t1;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 12948 13111 . + . ID=g3313.t1.exon6;Parent=g3313.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 12948 13111 . + 2 ID=cds.g3313.t1;Parent=g3313.t1 #PROT g3313.t1 g3313 MGQEGSKQYRGDSTGSRSSVKNGGDRASQRVLQDPFLVDDAPGAVVVVQQSTAASTPTRMDAPEIRALQEIPAVSASDCNCWSECGLHLVAMVALVCTSILYGAALCGSLVIFDSHAGVDSERGVAHVFTPLLRESLQLNWLANSTGEQSLARLDPVMPAVVCGRLQRHVTVCAQLVQREQEMLSDYVTAVEESTVTAVSSLADTLQRVTKCTAQLQEVAAVARTLQSIQASVHRSLSAMQSLNDMLPEAERLETFRWHSPPPNKLAAYSTQ* # PASA_UPDATE: g3311.t1, single gene model update, valid-1, status:[pasa:asmbl_10008,status:3], valid-1 NODE_923_length_15845_cov_40.8781 . gene 6331 8762 . - . ID=g3311;Name=g3311.t1 NODE_923_length_15845_cov_40.8781 . mRNA 6331 8762 . - . ID=g3311.t1;Parent=g3311;Name=g3311.t1 NODE_923_length_15845_cov_40.8781 . five_prime_UTR 8674 8762 . - . ID=g3311.t1.utr5p1;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . exon 7776 8762 . - . ID=g3311.t1.exon1;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . CDS 7776 8673 . - 0 ID=cds.g3311.t1;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . exon 7444 7604 . - . ID=g3311.t1.exon2;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . CDS 7444 7604 . - 2 ID=cds.g3311.t1;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . exon 6331 7184 . - . ID=g3311.t1.exon3;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . CDS 6411 7184 . - 0 ID=cds.g3311.t1;Parent=g3311.t1 NODE_923_length_15845_cov_40.8781 . three_prime_UTR 6331 6410 . - . ID=g3311.t1.utr3p1;Parent=g3311.t1 #PROT g3311.t1 g3311 MASAGVRPTVARSAWDGSPNAQPTTSAHPHTHDEGGQVFDLQKLLFGMHAARSRHHHNSGHHAHDGRQSDAHSQRHRHQHGRPDGKSGAALQPRRQRTSLSAAEERFEDTLLDPKLGLPFALLDVAPRVHTARTALSLVLALEWHGFATRLITALVAMETGMSPRPVDFFGDDRPGAHALRAFMRIHGLRFVRNALVLPFADLAEHGWRLRTERRLIADPSRVDPLDVMLAAQETADALVFAADKVPVSIKRVVGEVIDQHTRLKGRRASEGPVAAARVFFTHFVCPAVASPGTYALSTAPLDHYAKRVVVLVARLLSNAGTGTMFVEPTLAPFNVFIEDTHPKLVALMSRLAARRTELPTLAHEMTPFTIPPPVRVSALEFLFSVARDAREDLEALVARTQSSPPLSRPVSRTRDNVGVSHGSAGGLARETDSMSSFSGSTTLSLSSGSYSSTSTGSQSPAGLSQTPSRRVQSSQSVPAANRRAACGSSARLGAHPSGASSHTHATHTRRSPSRNSLSDSSDTFSDTDSDSESNSDTGSDDSCSSDGSSGSRSHAGGTTQGRTTSSAAVSRAPSCHSRQELAPNAQSRAVSDTDDTETSESGWESEGRD* # ORIGINAL: g3309.t1 original gene structure, not modified by PASA NODE_923_length_15845_cov_40.8781 AUGUSTUS gene 358 1910 . - . ID=g3309;Name=g3309.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS mRNA 358 1910 . - . ID=g3309.t1;Parent=g3309;Name=g3309.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 1758 1910 . - . ID=g3309.t1.exon1;Parent=g3309.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 1758 1910 . - 0 ID=cds.g3309.t1;Parent=g3309.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 358 1533 . - . ID=g3309.t1.exon2;Parent=g3309.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 358 1533 . - 0 ID=cds.g3309.t1;Parent=g3309.t1 #PROT g3309.t1 g3309 MARVSDVLAAPKALAECALAHPLLTAVGAVGAYGTAKAIAKAYDFLHVDGPVDYNSERHGGELVAEVLKAHGIKFVFTLVGGHVSPILVACERTGIRVIDTRHEVTTVFAADAVARLSGVPGVAIVTAGPGLTNTVTAVKNAQMAESPLLLIGGAAATILKGRGALQDIDQMSLFKPLCKYTATITRVCDIVPTIREALRAAQSGKPGPVFVEMPIDTLYPIAPVVREFAKDTGGKGGLGGKIVAWYLQHHIRRLFGGAFTPRDVSPLPVKVPTGTNAQVAAAVRLIRAAKKPVILVGSQATLPPTPADTLAKALLSLGIPCFLGGMARGLLGKESPIQIRQQRRQALKEADLVILAGAVCDFRLEYGRAFNRRAKIITINRDGAAATMNSDLFWKPTLTVAGDAGTFVADLSRSLRGSYTAPSDWISSLRQRDAEKEAANM* # ORIGINAL: g3314.t1 original gene structure, not modified by PASA NODE_923_length_15845_cov_40.8781 AUGUSTUS gene 14236 15748 . - . ID=g3314;Name=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS mRNA 14236 15748 . - . ID=g3314.t1;Parent=g3314;Name=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 15652 15748 . - . ID=g3314.t1.exon1;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 15652 15748 . - 0 ID=cds.g3314.t1;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 15394 15507 . - . ID=g3314.t1.exon2;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 15394 15507 . - 2 ID=cds.g3314.t1;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 15098 15202 . - . ID=g3314.t1.exon3;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 15098 15202 . - 2 ID=cds.g3314.t1;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 14817 14939 . - . ID=g3314.t1.exon4;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 14817 14939 . - 2 ID=cds.g3314.t1;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 14236 14609 . - . ID=g3314.t1.exon5;Parent=g3314.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 14236 14609 . - 2 ID=cds.g3314.t1;Parent=g3314.t1 #PROT g3314.t1 g3314 MYEDRMDIEFSDNEVLGTPDYIAPEVILGTGYGAPVDWWALGVILYEFLTGRPPFYGETVEELFQMALSGEIEWPSDEDLAVSNTAQDFIARLLVQQPQIRLGSQGDASDLKPHAFFANIDWDSLLLQKAEFVPVIDDKEDTSYFDAREDRYPRDDNLSRSSSVESLTTRDATPSQPLTSMSKFSNFSFLNLTDIDDPDGEDEGEDEVRDIKEDGRGNDEEGGPHASGERRRRGDNASDAPESSSVSRAVGLAGADGEGEGSPQLSRGSS* # ORIGINAL: g3312.t1 original gene structure, not modified by PASA NODE_923_length_15845_cov_40.8781 AUGUSTUS gene 8988 9935 . + . ID=g3312;Name=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS mRNA 8988 9935 . + . ID=g3312.t1;Parent=g3312;Name=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 8988 9194 . + . ID=g3312.t1.exon1;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 8988 9194 . + 0 ID=cds.g3312.t1;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 9300 9420 . + . ID=g3312.t1.exon2;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 9300 9420 . + 0 ID=cds.g3312.t1;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 9576 9631 . + . ID=g3312.t1.exon3;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 9576 9631 . + 2 ID=cds.g3312.t1;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 9798 9935 . + . ID=g3312.t1.exon4;Parent=g3312.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 9798 9935 . + 0 ID=cds.g3312.t1;Parent=g3312.t1 #PROT g3312.t1 g3312 MEGIAAASAVDAQRAVGVHVGGANVTIVPYESELQMPSIMELITKDLSEPYSIYTYRYFIHNWPNLCFVAMDGERCIGAIVCKLDMHFESMRGYIAMLAVEKDYRKHKLGTRLVSQAIDAMIASGADEVVLETELTNKAALALYENLGFVRDKRLFRYYLNGGDAHRLKLWLR* # ORIGINAL: g3310.t1 original gene structure, not modified by PASA NODE_923_length_15845_cov_40.8781 AUGUSTUS gene 4251 6227 . + . ID=g3310;Name=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS mRNA 4251 6227 . + . ID=g3310.t1;Parent=g3310;Name=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 4251 4296 . + . ID=g3310.t1.exon1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 4251 4296 . + 0 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 4404 4465 . + . ID=g3310.t1.exon2;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 4404 4465 . + 2 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 4703 4827 . + . ID=g3310.t1.exon3;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 4703 4827 . + 0 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 4994 5225 . + . ID=g3310.t1.exon4;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 4994 5225 . + 1 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 5374 5524 . + . ID=g3310.t1.exon5;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 5374 5524 . + 0 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 5676 5728 . + . ID=g3310.t1.exon6;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 5676 5728 . + 2 ID=cds.g3310.t1;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS exon 6045 6227 . + . ID=g3310.t1.exon7;Parent=g3310.t1 NODE_923_length_15845_cov_40.8781 AUGUSTUS CDS 6045 6227 . + 0 ID=cds.g3310.t1;Parent=g3310.t1 #PROT g3310.t1 g3310 MKTAGTDGRREQRLTRLFGQAALIGLCSANDNALVEGGNVAGELRMIASAIELAKISSVCEQAEADDKENCRANGSQGLESQFSRDVSFLDTLCSKCDMSLLFSSDVQLFPADVLHNAQPAGPGCKDIRVVGAAAEELAAAIDEKRVRLAMLDEKFPHNPAENNNDAAKAYDEAIAEVRIAMTKFNALYERDFRQWTNNNAPAPSPIGPTASRVLPEVEKFEAFMASLETLRRSYEMITDQTSQRARALASDKKGILAEGSLDRLRENILVIQAAIQRRRAGF* # PASA_UPDATE: g7992.t1, single gene model update, valid-1, status:[pasa:asmbl_3743,status:12], valid-1 NODE_21_length_62915_cov_41.748 . gene 60631 62870 . + . ID=g7992;Name=g7992.t1 NODE_21_length_62915_cov_41.748 . mRNA 60631 62870 . + . ID=g7992.t1;Parent=g7992;Name=g7992.t1 NODE_21_length_62915_cov_41.748 . exon 60631 60652 . + . ID=g7992.t1.exon1;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . CDS 60631 60652 . + 0 ID=cds.g7992.t1;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . exon 60826 61035 . + . ID=g7992.t1.exon2;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . CDS 60826 61035 . + 2 ID=cds.g7992.t1;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . exon 61265 62229 . + . ID=g7992.t1.exon3;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . CDS 61265 62229 . + 2 ID=cds.g7992.t1;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . exon 62472 62726 . + . ID=g7992.t1.exon4;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . CDS 62472 62726 . + 0 ID=cds.g7992.t1;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . exon 62817 62870 . + . ID=g7992.t1.exon5;Parent=g7992.t1 NODE_21_length_62915_cov_41.748 . CDS 62817 62870 . + 0 ID=cds.g7992.t1;Parent=g7992.t1 #PROT g7992.t1 g7992 MAATAQPGAELSPETVEWYLNENPEFVGSYIVRNCSGAVIGAWLEAHPNYFDKLIQTKATKRHIKEWLKAHPTFKTSGSQSDLSGGLVPTLHVPPVMPANILGVNADNLRNFASVSTLKPQQKDRQMLKQLSEKDLIIELVRDIGHELDLQSLSHKILQNVAILLNADRASLFLVDKSGMLVSKVFDVSAESTMEEQEGHGEIRVPLGKGIVGYTAETGETVNIGDAYSDSRFNQEVDKKTGYRTRSLLCMPIKFAGGQIIGAAQVVNKDSGNTAFNENDERIFETYLQFCGIGIRNAQLFELSVSACERSEILLTLAKSIFEEVDMVSLITKIMRHAAELVSAERCSLFMVDRATNELYATVFDVHATENKVEKETAAKEIRFPIGKGIAGYVAETGETLNIEDAYTDDRFNRDVDKKTGFHTKSVLCMPIYDKDMKVIGVVQLVNKIGSEKFHLDDEKLFAAFAIYCGLGIQNVMLYEDVLKASMRAFLLANVLTIGIV* # PASA_UPDATE: g7989.t1, single gene model update, valid-1, status:[pasa:asmbl_3744,status:12], valid-1 NODE_21_length_62915_cov_41.748 . gene 1058 26474 . - . ID=g7989;Name=g7989.t1 NODE_21_length_62915_cov_41.748 . mRNA 1058 26474 . - . ID=g7989.t1;Parent=g7989;Name=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 25676 26474 . - . ID=g7989.t1.exon1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 25676 26474 . - 0 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 25332 25526 . - . ID=g7989.t1.exon2;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 25332 25526 . - 2 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 25098 25214 . - . ID=g7989.t1.exon3;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 25098 25214 . - 2 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 12786 24899 . - . ID=g7989.t1.exon4;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 12786 24899 . - 2 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 5518 12701 . - . ID=g7989.t1.exon5;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 5518 12701 . - 2 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . exon 1058 5267 . - . ID=g7989.t1.exon6;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . CDS 1494 5267 . - 0 ID=cds.g7989.t1;Parent=g7989.t1 NODE_21_length_62915_cov_41.748 . three_prime_UTR 1058 1493 . - . ID=g7989.t1.utr3p1;Parent=g7989.t1 #PROT g7989.t1 g7989 MDTTGALAGRITRTGILARVLAIAAIVAAVVLPSVDAACAGGSYPLGNGCAPCPSGYHCPANTPAPILCPLGYYANATGASTCAGCPAGSSCALPSNPPVACGVGFYSFGNSANCTVCPGGASCASITTSFPSPCTVGTFGLVGSSACSPCPIGHSCGSPSMLAPAPCPTGQYANGTGHSTCTVCEQGRYCAGGTSSTPCPRGAYSGGGLSLCSNCPPGTYSLGGASSCTPCPSGSMCSDPSVAPVACSEGYYASGSATNCTLCPPGTLSAPGKGSCTSCVAGFMCPDPRVGPQPCPLGTYSTTGTTVNCTICPAGSSCSSANSPPIACAAGTYSLGNWALCTDCPEGSRCPSTSESPIGCTDGTYSLAKGTSCIECPAGSYCPTTSSVFECRTGSYSLGNATVCTMCPAGSACATVNSAPSACPAGQYSIGNQTTCTACPPGYMCPNAAQGPVPCSPGTFAVGSAASCTACPAGSRCSVTTAAPIPCSPGEYSPASALNCTACPAGWACPSIGNPNANTLCTPGTFSVGRQQVCSACPAGKMCPAPATAIATNCPAGTWSLSNSASCTPCAAGFACPNSDGTGISPCAPGAFSTGSQTTCTQCPAGYACPARDTNNMTACLPGTFSTGGRALCVTCPAGKKCPSTVAGPGVGDDCPLGSYSTSSQASCTPCAAGSTCPNSDGTGITACPPGSYSLVGGGTCRSCPAGQYCPVTTADPIPCAPGYTSGQNSIICTICPAGSACVSATSIQLCDAGTWSAAGQTSCLPCSPGYACLGSGNTFSTPNPCPIGKYCPDGLTVIPCPAGTYGITAESSTVDTACGPCPAGSYCATTGLTQPTDICSPGFYCPVGSSLPQACPAGTYNSDPSEISVLSCVTCPAGRYCPPGTSQVGLTGNICAQGYYCPAGTNHFGDNPCPKGYFGASSGFQNASECTICPAGYYCNDGSGFPAASPMPCPAGTYGPTIGLAYLKQCTPCDAGRSCPSPAQTESIMPCIEGHYCPNGTVLATESPCYPGFFTGATNLSNPQQCTICPPGFACNWGTGVTISPALPCATGHYCPAGTALPDQFPCPPGTWTDQYNLTAPTECYSCPAGSYCVGGGSQPTAICLPGYYCPARTRLVFEFPCPPGTFMPNYSALALSDCSPCPPGKYCELATVTPADCPAGTYRSVNGSTGPSTCPQCTGGSYCPAGTVNPIACGVGFYTPVGMSACLACPAGFYCDSNTTSDATMRANRKCPAGKYCGGSLTQLTDAIDCPAGHYCVAAAPLPVPCPIGSFNPSAGGVALASCLACTAGSYCLEGSVSVTGPCDAGYYCQTNVTNVVITSIPIGAYGPRQQPCPGGTYTNVTGTPDVTACVTCPASYYCPIGTGDALICPRGSYCPTGTADPIPCHFGRFGNTTGLSTNAECLACPCGYYCDSKGLTSPRGICDPGFYCISGANTSQPTDGVTGDVCPRGGYCPAGSCESLPCPIGTFSNTSRASTFQDCFDCLPGYYCANARLPFPTGPCDPGFYCTGGAKHPRQFATPAGFYSPSGQSAPIPCDAGNYQPAGNSSSCRPCVAGYYCPDQAMTAPTPCPSGGFCPEGALIFTLCPPGTYSTSQLLSNSTGCFSCPAGQYCEGSGLTAPQGACEAGYICYGGSKLRAPVAGPDVDYGDICPRGSYCPLGTPSPIPCPVGTYSNAFGLVNATDCTSCDPGKFCSTSGLTAPAGPCAAGYYCTLSARTATPGSVADGGLPCPAGYYCPEGSTSPTPCLAGTYTTTPANPTCATCPAGSYCTGTAAPVTCPVGYFCLNGSTNATQNPCPMGTYGKSSGFESESECTPCDAGKYCAETGLSAVSGPCTAGFYCSVGVNQASPQGWNTGTGGPCPPGYYCPLASTVPQPCPAGTYSGTYFNTAINNCTQCDLGMYCAEGNQTTPTDRCTAGYYCSRGSREATPIDGVTGGVCPAGSYCPAGASSPTLCAAGFYADVPGLSACTACPAGFFCPAGTTNHTANQCPAGYYCPERTTLAAQFPCPAGTFNILTGRTTLSDCLDCPAGKYCATAGLSAPTGNCAGGWYCSGKSTVNAPNTCASDFCPIVGGKCRAGTYCPPGVTQPLGCPAGSYCATDGLTAATGTCIAGFYCVRNATIPNPTDGITGNQCPAGSFCPAASTGPQLCLSGTYSPGTGNINSGSCLACTAGRYCANAGLSSPLGLCQEGYYCPPGQTVPNPIDFICPAGNYCPSGSVSPIRCSAGTYQDETGASFCKTCPEGYFCDNSTAAVVTFNQFPCPAGSYCPSGTKFSNAFRCPIGTFSSAVGLVNSSQCSPCSSGKYCATTGLTAPTGNCNAGYYCRSGAKTSTPTEGSDADTCTLGNFCPLGSAEPQPCPAGTFGDVRALQSAGQCKACTGGFFCAGGTTSPSGPCRAGHFCSGSSPEDAPVAKAWGSTCPIGNYCPQGSSAPVPCPAGTFNPLTSVTGLAGCAACTEGKYCATQGLSAVTGDCKAGFYCTSRASTDAPIDGVTGNECPIGSYCPLASSLPIPCGNATYMNVTQATVCNPCPAGYYCTSRVNPVPCPAGYFCPARTGADIQPCPPGTYSPLTKLTSTNECRQCDGGMYCSDPASISPAGSCWAGFFCASGVDQPNPTSGFRGVGGICPVGFACTNGTFAPRGCDAGKYNSLTGQSVCLDCPAGFFCLASATNFASTPCPAGYFCPKGTAASLANPCPVGTFNPNVGGQSLGDCRSCTAGSYCGNTALSAPSGLCNAGYFCRGGATSATPPNGGTGGHCTAGNYCPAGSIAMKPCDPGFYCQQDNLGAVSGPCQAGFYCTLGASVASPVDGTTGALCPAGSYCPAGASAPIACDVGTFSGSTGNTAVANCLSCTPGMYCKNNGAVVPDGLCFGGYYCPSGQSDPQPASFKCAAGHFCPNGTAAPIRCYAGFYQDQELQTSCLTCPSGFFCDNSTSAVSDYLSFRCPAGHFCPAGTRLATQFKCPIGTFSAATGLLDVAQCTPCTAGKYCATSGLAAPTGNCNAGYFCKLGAKTSTPTEGANANVCPAGSHCAPGTVDPLPCPTGTFSNTPGLQDSAQCTPCTSGSYCATQGLTAPTALCSAGHYCTTGSPESSPVAKAYGDVCPRGYFCGLGTVVPLACPAGTLSNVTGLAVVSQCAKCPAGFSCETQALATVTGPCSAGYYCIGGAATRFPIDGLTGGICPVGSYCPTGVADSVPCQNGTYMNLTGATACTTCPAGYYCTIRTDIQACPPGYFCPVGTGANWVPCPRGSYSANTLLSTSAQCTPCDAGTFCPSVGATSPAGPCWGGHYCQSGVDTFAPVSGFLGTGGVCPTGHFCPNGTVTPQACAAGSYQSATGSTSCVPCPAGFFCPDASVDFVDKPCPAGYFCPVSTVAASSFACPAGTFSNKTGLTAAAQCSQCPAGRACDGTGLTAPSGPCSGGYYCVGGASTPTPGSGGVDATGGSCPVGSYCPIGSMAPIACPLGMFCGADNLDAPSGNCTAGFYCSGGARFADPTDGVTGYICPGGSFCPPGSSSPTRCPPGTFTNAVGNGNIASCNNCTAGMFCIDSGLLEPTGPCDAGYFCPQGQKIASPPAYACPVGNSCPAGSAAPVPCLSGTFRNTTGGSVCQICPAGFFCDASVAGAVVDYSGSPCPAGFYCPDATPLATKFPCPAGTFSAAVKLTAVDQCTPCSAGNFCGSVGLTSPTGPCAAGYFCKRGASSSTSAGSGLDFGPCPAGSFCPAGTSEPPRCPVGTYAPVGSLVNITQCTPCLAGSFCAQTGLTSPSGLCAAGSFCKAGSPEAVPVGKSYGDVCPVGAYCTAGTVNPTPCPIGTFSNVTGRTSAGECTSCTPGRYCDTLGLSAPAGLCRQGFYCSGGAKTDSPVAGTCPIGNHCPTGSPSPVPCVDGTYMNVTQAASCLDCPSGFFCISRTSAQPCPAGSFCPSKTGSNWQPCPRGTYSPQTGLSSSAQCRQCDAGRFCGVLAATATTGGCWSGYFCQQGVDVPNPGDAANIGLGGICPAGTSCANGTASPVGCAAGRFNSLPRQKDCTICPPGYFCLANSTTFVNQPCPAGFYCPAGTTFSTAFPCPAGTFNPSTGGMSIGDCRPCTGGSYCEGAGLTAPTGRCLGGFYCSGGASVPNPPNDGTGNGCAAGFYCPNGTAFPHECDGGKYCPSPLMSAPAGPCDAGFYCIVRATIPNPVDTVTGFFCPAGAFCPSGSVSPQPCSPGTFNPSYNSVNSSSCLPCTSGFFCDDFGLPAPKGTCAIGYFCPPGQVTPSPPDFVCPAGSSCVEGSALPQPCPSGSYQDEVGLGTCKQCPQGYFCDGSQGGVVNFNSSSCPAGYFCPPGTQFATQFACPVGTFSNITGRTSSSDCNPCSGGKYCDTAGTTRPTGLCDAGYFCLSSASVKAPTDGTTGNRCPAGFYCPAGSSSPTPCPVATAPSALKCSGGYVCVRGAVISNPSTAAEGGYICPAGRFCPSGATIEQPCPPGTYAPTQGLASCLQCPAGNMCPIANMTSPVSCPAGSYCPAGTSNPALCPAGTYSPLASLQDASQCAACDRGFYCDRPGLTAPTSVCDAGFYCATASKVPNPFGDVSPSFTTNGVCPKGHFCLNGTTTPTKCLAGYMRRDTGATNSVDCVICTPGRFCAQDGLSAPTALCWGGFVCPGTVPVSVPNPASLLCPTGHYCGNGTSVATPCPAGTFQDAEGATACKPCPAGFVCEQTTTTPLPCPVRYFCEVGSSYPPFCPNGTYGNTTGLTTASQCRLCVTGQYCRAGLITGPCEAGYLCLQGSDTPTPDGSKPAVGGPCPWGHYCLEGAVQPSLCSNDTVIIGEGASKPSDCTPCQPGYVCTGRNPIPELCPEGHYCPFDTQVPFKCPNGTYLDYRGGKSMADCNICPAGFWCLYEAMASFNSTPCPAEFYCTAGTLLPVRCPDGTYRNDSGAASVADCYACPAGFFCDSNSTLELRSCDQPNWCPVGSSRQKPCPGGFYCPTPAVRITCPAGSFCPPASVEPQQCPIGHYCVTGQSFPTLCPLGYYSPDGVDRTSFDTACRLCPPGYFGAQPNRTECSPCDPGYVCLAGAKTAMPQANATDNGYPCPAGYYCPQGSGYPLACDPGTYQPFALMSSKAACISCPENTYNNKYAQAACVPCGSSSQSSGGATTCACKGAFRAFQSSDGYCICMPGYEFRDDNNLISDEDGFVDCQPKVYSICATGSSRAQDGRCLNAAQWNVYCDSEVCKSGSLGYNSALGACECKSVEDLDAVCDSLCRRNEGRMEVVCSNPPSVIIRKPTTGVNVTYAITSEDPLFTSCSNLDGSTKQLSVIQMGTDGFRGLYDADLDYLETLLTASNSTTTRTFSSRRRRATSGSLDVSQSGIDNPIVCISSGQTVVWDIDKTNFPVYDKDNLYNTNPTFDFGEFRQLSERLVKTNATEDVFEFTFMTEGLYVFYTASNPSKSMYLRVMGLHQICPESVTFTPATSANLIRYGIRRNDSLLLEPDWVLIFSMVGGVLGMILVLVISLMYFKKKGWIKTSFASPRFRKLAAMYDFSNYASKGSAIRHEKRTHRAAAAAAAAATGTSAVGGTAVVSRGDAVGGEASVDDDFWDYSRQVDLEGFTVGAFYDKLEDQTHKVTAEIARHKDDVRSLYQRIGQDAEELKAMWVSKLNVRGPGKAASEKDMKLYEETKRALDKEIERRKQLGVKFGAVLAAERDTLTEEERARDDYETQQNAVMDDVRDTFGAVVAHILQPPENADGEDQREMLSRTESQLSTVASEHASECARRGAWINIGSAIGAPLLFPNSKDVVSVEFLTEGEGKLHEIEGLLRLDSVTGLFVPVAGARMLGADSSPVDIPPGYCVHPGTGRALPICGNTAMDAVTSKIVFTADTNSDSSQEQLIPFVPCPTDGGGAPLISHLRALDKKSHMRFGNLIPDAESGLHVPLVACTIDPVTKIALPVGGTYKDTVTGLLVPICIGDVFVPEGAKEPVVILSVTLEQGTGRVLPLGKALADGKKSRGTRTQAASEGVLFMGSAATDPLSRRDCHVTGLAVAGGQVVPCYGGVQSLLDATELGAEMAVHKALVALGEILAASLASRASGGTKDEKTEKAIVSSVAALDSARAELRKARSRNRGSRIHTDVMLTRRQSQMKALAESGGSLGTMEYLSTGRFLPILIGGPMFETSEGREVVVVDVTTDKDTNRVVPLGGLMPDAVSGETVPIIPGARMMNFTTGKVCAVAGAKLDPRTGRVVPVPQVMATLVRREPQKELLDALEDEVGARRSLSRRQRLGEQAVRDGVTHISAALLADPEAVGGRLRELNDAAREQLAANVESFRREVKRRADAAVVNAMVLPEDVSSLLTSQDAVEQKTYDELVASYARVLDSLAGYQRTVADARSKFTQKMDELREAHNPDAEEVVRAKFGQKLEHLKSEFVSQYALQKAGLRVKDACVELLRDKADVNGAECRVLLRESVRASALEFAEASGSGGLSAAATASSGAGDDIGQPSAELIRLLERLIVLIQEAPGGLGMALVGMATASGAHTATALQSLPFASPFAGGVALSVPQVMAAALAPVERSPFTLLPVGSAATTGKVGEAAALGVDFSGVAKSEHSVGSAQNLSTGGGDETDDNEHIAVMEKEELEEQITARRANMTEDMQAALQETDAAVAREEAIEHQVLDRIKLADELKTNELREIGGALSLAEVKRREAQDELNRKMEDELTRASSEDERRKILQRYEAESEALAKRLDADKEAQMKSLRDRLAQERVRRTKKLSEEQKKEAEASGIVVPASPEAAASKAVVEQELQVVQERQQTLIAEMAEQEAVDTAKIALSIAAEEETKSAEIFDEMIEQLVVDGKLSAEERTQVLDQHKAGVAVISTEFDGKMQRQVDLLRERMAKRKANKVGKMRGDHQKELKGLADDGSAEAQAVRQRQVAETQALLRQLAAEEADEKCVIISRLNADRRRAVQEHQSRLLSDLLKYGKVTPADTEQLLRQHQDECAQLASALAGSKRRQADMLHARLEARKRMKEQKMVEEVVAKQIASMEESVAAVTMGEGETHALPEAVSEATNSAAAALPQDKTLELDDRHEEAQVQLCLKHQDESRRLHEELEAESKAEEVRMNGVLDKARERAMRDREARIAELNRNKDTMPKEEYERLLKAHQEELANLEKNIDGARQQQQAALKAKLEARRRQKEEAQRLRHENEREEAVVQHQQEMLDLESRHAKEAERMALSASLDETDDDKKEGVIYKVLQRRHLRETAKLGHIMEDDRRVAVAAALAAFEETAIADREKREATHEQELVALAEETVAMRPEEATARRKVVEERHAKEIAELVARCDGDRKHAERIARQTAEVKLAHAQLALKERHYKEMAQTFREFTPEQAMLHRFTEEGDRKARELKEFMVQHGELRKAELERIKAERMKGEEAEKRRLEAEVARFERELDDERQREVDRQNKLLEAKKLREMKEQEERQKKELEGMGAIGEDERKRILEQHAKDLVQLASALDGSKAKQQEELRRKLEAKKAAKVKRAEEEAENKRKELERIEREKLEKLEGERQREEAERNDKLSARRASRAQLLEARETEQKLKKEASASAANVAAAASALEVQQQQQQQQAVQQQQFALAQAQMQMQLSGLQYSWRSERDILALLMASPLAHKIAELERVVLGALSNGGAGAVDGVGSASVFASGSPAGDSFIDLRDAQWDVGGELCPVDINDLRPAQFVVYRFGHFVTQLMRTRAKAPDVTLLLASSIPSTNYARNAFRRSYYHDERRKILFVRRERLESVGDFVLVITHALAHIKVGQMSDDGSALFLREFYNLMRVIGEDLFLARSKSAPALRMSAADAEDGANPIEAVFNKARTPTQKVNVVNELVDAKINDAITTGELSAHMDRFEAFYRNSALKEYLRCIEETAESRESPIANDAIDKRLYELTGRSQQPQMGQSLPVSVAGRLMRRPSSGANLVTTSTANRRDAYRALLDSQVNQLQNKVDEVNAELIHIMKDARDTGVGVRKIEGELATRRAELANAAPGSDSATTLAALCVDLDARARKARAHMTAINAMQESTLKRLATHREELEQKQKALASNA* # ORIGINAL: g7988.t1 original gene structure, not modified by PASA NODE_21_length_62915_cov_41.748 AUGUSTUS gene 2 365 . + . ID=g7988;Name=g7988.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS mRNA 2 365 . + . ID=g7988.t1;Parent=g7988;Name=g7988.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 2 168 . + . ID=g7988.t1.exon1;Parent=g7988.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 2 168 . + 2 ID=cds.g7988.t1;Parent=g7988.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 300 365 . + . ID=g7988.t1.exon2;Parent=g7988.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 300 365 . + 0 ID=cds.g7988.t1;Parent=g7988.t1 #PROT g7988.t1 g7988 PPSPPLAQIHFVKGSHAPGSDKQKLFAAHFDLENVEEFLGGTSEWVFDHKTYWPQEVQRWRERREKEDKDLDSHVE* # ORIGINAL: g7991.t1 original gene structure, not modified by PASA NODE_21_length_62915_cov_41.748 AUGUSTUS gene 56017 59674 . - . ID=g7991;Name=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS mRNA 56017 59674 . - . ID=g7991.t1;Parent=g7991;Name=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 59575 59674 . - . ID=g7991.t1.exon1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 59575 59674 . - 0 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 59397 59468 . - . ID=g7991.t1.exon2;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 59397 59468 . - 2 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 59149 59222 . - . ID=g7991.t1.exon3;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 59149 59222 . - 2 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 58867 58987 . - . ID=g7991.t1.exon4;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 58867 58987 . - 0 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 58600 58680 . - . ID=g7991.t1.exon5;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 58600 58680 . - 2 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 58361 58461 . - . ID=g7991.t1.exon6;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 58361 58461 . - 2 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 58144 58223 . - . ID=g7991.t1.exon7;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 58144 58223 . - 0 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 57793 57887 . - . ID=g7991.t1.exon8;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 57793 57887 . - 1 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 57548 57611 . - . ID=g7991.t1.exon9;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 57548 57611 . - 2 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 57171 57318 . - . ID=g7991.t1.exon10;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 57171 57318 . - 1 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 56925 57014 . - . ID=g7991.t1.exon11;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 56925 57014 . - 0 ID=cds.g7991.t1;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS exon 56017 56697 . - . ID=g7991.t1.exon12;Parent=g7991.t1 NODE_21_length_62915_cov_41.748 AUGUSTUS CDS 56017 56697 . - 0 ID=cds.g7991.t1;Parent=g7991.t1 #PROT g7991.t1 g7991 MLSMRSSPSEVIRCAAVDDRLEQFKPISCTAHPGGRYFAVGYEDGSVSFVDTAAVCEGIVVRSFSAHANMISDVDWHPNGHLASASADSTIVLWDAHTGQQLNAFHGHTTTVKTVRFNPDDPNILISGARDNSIMVWDARCTPSVTTSGVTFTKPARRICNAHTDEQQHIAQATTAGKRRKIVNVRSSTAVTSALFLRNGSIASGGDGDGTVKLWDMRRHHLTHNGVSVPLSSFVPGKSCRAIVSLDENAATARLLVGCTNGSSYLFNSGRYDAHVAKFVGPPASFFHRSRFSPSGQFISRGCADGVAHIWEACRPSQAAYVLRGHTSEVINVAWSPRDFDAIMTTSDDGTSRLWRFDRNATDCNDGTSNTKKKHPEQPDSSSVDGWGVCVRNDAHVASPVAEEEHERVTTLQRTALQLLQPPINRVFGQAIARSPRSPASKSEDERENNAMDEVCPSALVRETKGDVQMMCVDVPIKADGAGGFGPSSLERQTPAAPRTQQCIPNAPGHVSHKAGKRRRRHCEDSSPSPPASPQSTRKRECAQPLARGRVHTQATLPVLVAKIQRDR* # PASA_UPDATE: g7990.t1, single gene model update, valid-1, status:[pasa:asmbl_3746,status:12],[pasa:asmbl_3747,status:12], valid-1 NODE_21_length_62915_cov_41.748 . gene 30168 55541 . + . ID=g7990;Name=g7990.t1 NODE_21_length_62915_cov_41.748 . mRNA 30168 55541 . + . ID=g7990.t1;Parent=g7990;Name=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 30168 30174 . + . ID=g7990.t1.exon1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 30168 30174 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 30459 30541 . + . ID=g7990.t1.exon2;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 30459 30541 . + 2 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 30671 30814 . + . ID=g7990.t1.exon3;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 30671 30814 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 31123 31269 . + . ID=g7990.t1.exon4;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 31123 31269 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 31491 31637 . + . ID=g7990.t1.exon5;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 31491 31637 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 31767 31910 . + . ID=g7990.t1.exon6;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 31767 31910 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 32311 33235 . + . ID=g7990.t1.exon7;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 32311 33235 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 33476 33664 . + . ID=g7990.t1.exon8;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 33476 33664 . + 2 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 33868 33984 . + . ID=g7990.t1.exon9;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 33868 33984 . + 2 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 34247 46105 . + . ID=g7990.t1.exon10;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 34247 46105 . + 2 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 46190 51825 . + . ID=g7990.t1.exon11;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 46190 51825 . + 2 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . exon 52062 55541 . + . ID=g7990.t1.exon12;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . CDS 52062 55076 . + 0 ID=cds.g7990.t1;Parent=g7990.t1 NODE_21_length_62915_cov_41.748 . three_prime_UTR 55077 55541 . + . ID=g7990.t1.utr3p1;Parent=g7990.t1 #PROT g7990.t1 g7990 MLGRKCSNPSLAPVQCSAGEYSLGETTTCLACDTGYYAPNPGAASCSPCPVGAQCSNPAVAVACLAGQYSLGGVTTCLSCASGFYSNTTGSTSCIACPPGHQCSNPTGPDACPPGQFSLGGSVTACSACTPGYYTTSAASSACLACPVGHKCSNPSLAPVQCSAGEYSLGETTTCLACDTGYYAPNPGAASCSPCPVGAQCSNPAVAVACLAGQYSLGGVTTCLPCPSGQYVTTPGATNCTACPRGFQCSSPAIAPVPCLPGEYSDAMASTCSPCPRGAYCPLPGADPIVCPPGYFQNVTGKASCIECPEGFACPDITAAPVVCDVGQYSIGGQAACSDCPPGLYATTTGSPSCIVCPAGYRCPSPDIAPIACGSGTFSLAGSSSCSACPPGQTCADPTRPSGCPVGQYVNGSSCDDCPAGNYCPNPTDNPTVCPEGTYNTATRQITCVVCPAGSMCPTPSASPVPCPAGLFGVGGALVCGPCADGYYSGGGASVCLPCPAGMECAGGVLGANCTAGTYAPIGAGLCLPCTQGMRSGVGASTCLPCPAGQDCADPSAPASCAPGSFSLGGLVVTCTPCPSGHQCSGNATPVACPRGTFSNVGSQSCSTCPAGYECLDSTVPPALCASGFFSKDGGNPDCIDCPSGSACPSREHAPIPCPQGSFSLANSVSCTVCPPGSECLDPTSLPVACPNGTYSSQSAIECTMCPAGSSCATTNAPPTPCQSGSFSDIGSTACTPCPAGWACPSPVGSQSNVQCPSGSYSLGSTQSCTSCPAGFSCPDTTTISTITACPAGSYSTGGQVACTWCPAGWICPHVDGRSNSVCPPGQYSLGNATTCSGCPAGSECRLTTQGPVACAPGYFSFANRQICTPCPAGSQCPSTTSSGTPCAAGTYSVGLQTACTPCSAGSACPLTTSSFVVQCGAGWYSTPSSVACTLCDPGSFCTNTTSLPVPCATGHYSLGGQTVCTVCPAGSQCSDPSVNPVLCPQGFYSTQGAIACSPCSPGYACPAGATVPTPPEYECPTGYYCSDGKDATPCAGGTYNPLSGKNASTDCLTCPMKYYCPPGTGLVLESNACPAGYYCPSGSPSPQPCPGGMYNEFTAQIDFNACKVCPAGLYCPGGTRVGRACTKGSYCPPQSSIPIECPPGTYGDRTNGEDATVCLPCPPGSFCTQGVGAPTLCPRGTYQNNLGASSCTQCMAGMACAVAGLAYPSDVCEAGHFCPVGTIHPDDNPCPDGTFTNFNNLTAASQCSQCPAGGACSAGTGTHSGTGGNYLLPLPCAVGSYCPTGTRTPTQFPCPAGSWTNATNLQSATDCTPCPKGYFCTGGQSQPTAICPQGYFCPESTPAANSHPCPPGTYNDVAGKVRVEDCKPCWPGHYCGPQAVVTPTPCLAGTFQSLQNQSSVAACLACTAGYYCPTSATISPIVCGLGRFSSASATDCNTCSIGHYCESNTTTTTAMQTTMICPAGTFCLAGRSTQPNLVSDACPVGKYCALGSINGGVPQLCPTGTYNPITGRTSISDCISCTPGSYCVSTGLSAPSGVCAAGHYCPAGTVTATQFPCPAGTYLNASAAKDPFSCALCPSGSLCGIGTSLPSTCPLGFYCIPGTVTPEPCPKGTYGNATGLRRNEDCSPCPGGQYCAGQGLASSTGPCDAGFYCKERAYLSSPNDGITGGVCPRGGFCPTGSAVPLSCPAGTYSNTTGSKTSADCFACDPGYYCAGSNNPYPSGPCLAGYYCSGGANSPTQFQAPPGYYTVTGSANPLPCLPGTYQTANTSTGCLKCLEGYYCPTQATVLLTLCPQGSYCTTGSVSPTPCPSGTFGANQGLQNVSSCTPASPGFYVTQTNLLADEGHCFAGFFCTGGAKVPNPVGQAYGDECPAGHYCPVGTHTPVKCPAGKYNPNKRGTSLSACQPCLGGSYCASQGLATATGLCTAGFYCNAGSDVPNPTDNVRGNVCPVGNYCPAGTTSPLSCAPGTYMNATQAAACFVCPAGYSCNGNTLSACPAGFFCPQGTGSVLPACPAGTYSPRQLITQRSDCKECDAGKFCSGTALIAPTGSCDAGYYCASGVNVRNPSGSNTGTGGPCPAGSFCLASTSTPTPCPAGSFNGAPLATSSAGCSPCTPGKYCSRPGLTQEEGFCLAGYYCISQSQSRNPGVVSVTGGPCPAGNFCPLGSSTFVQCAAGTYQNSTVQSVCLSCPAGYYCLAGATDYVVSVCPKGHFCPDGTQTPTEFPCPSGTFQNRTSATSPADCLPCPGGLYCSGSGKATPTGSCDLGYYCSGSATSPRPVASPTGGQCDVGYYCPALGTAPVPCPAGQFCSTSGLAAPSGNCAAGFYCTGLSTTSSPVNGITGNVCPAGKYCPAGSSQGTDCPPSTFSATTQRTQLSDCIACTAGSFCLEGGLTQPSGLCSPGFYCPAGQNISNPVAFQCAQGFACPAGSASPTRCVSGTYQDNAGQSSCKTCPDGRFCDATTNPAIVSEACPEGFYCPAGTSFATDHPCPAGTYSNTTGLHAQSQCATCPAGMYCGSTALRQPMGLCDGGYFCVAAAVSKRPTDGTTGNICPAGSYCPQGSSTPQPCALGRFGNLTGLVEASDCVRCPAGSYCDDLGLSVPKGLCAGGYYCSGDATTATPTDGVTGNLCPIGNACPAGSALPVPCQSGSFMNVTLATSCQSCPAGFFCNNGVSPAPCPAGRYCPAGVSAGTPCPRGTYSTAQGLTGLDGCVPCDGGKFCNNLAGGSVSGTCDAGYFCASGVDVRNPSNVFLGTGGVCPKGHYCPAGSQFPQSCPPGTFLDTTTKTDISDCIQCLDGTYCEGSNLTAVSGNCDAGFYCKRGSITRNPAVVTATGGPCPVGKHCPSGTSDPIDCPAGTYNNLTGQAVCMDCPSGYYCPAGSVEYADKLCAKGHYCPARTETATQFPCDKGTFSDVEGSQASTDCQACPGGFYCGATGLAAPTAQCSQGFYCNGSAISAASALFQCPLGFFCPAGSTLPQPCTPGKFCGALGLASATTDCAAGYFCAREAQTSTPTDGITGDRCPRGKFCPAGSSSGTNCPPGTYSNATQLTLVSACTQCDPGWFCLASGLTQPTGKCAAGFFCPSGQTIATPASHPCGAGKFCVEGSATEANCPSGSYQDATGQSECKPCPSGSYCDASSGGVSSPTRCPNGHFCPDNTQSATQHPCPAGTRNNVGGLAAREDCASCPAGQFCATAGLVNPTAPCAPGFFCSGGATTANPSSVTGGVCPQGFYCPAGTDVPLECPAGTFGNQTGLTKAADCTNCTGGYFCDSPGLTAPIAQCIAGFFCSGSASSPSPLDGVTGNMCPIGSFCPPGTVQPKQCAVGTYMNRTQAAQCLTCPEGFYCVSGASVLPCPAGYFCPAGTGNDWQPCPAGTYSPQTGLSAASQCTQCDGGKFCSGTARTAVNGNCNPGFFCASGVNTATPLASGSFVGTGGQCPMGSYCPAGSAAPQPCPPGTFSNAVGLTNAAACVDCIDGRFCSAYNLTSPEGVCDAGFYCTRGSPSPRPGTVTAYGGPCTIGKFCPPGTSSPFACPAGSFNNATGEAACSTCPAGYFCPQDSVAFAANVCPVGYYCPAGTKSATENACPIGTFNNITGARALSDCRACTAGYYCPSVALIAPVAMCDPGWYCTLGASEPRPSNPATGGKCSAGTFCPLGSNAPQPCTPGSFCSSEQRSSPTGPCTAGFFCTLRATIATPVDGVTGDRCPVGKYCPAGSATGTNCPPGTFSNATQNSKVADCTTCTPGFYCQGSGLIQPTGPCASGFFCPAGQSSSAPSSFRCTVGNSCPTGSASPVPCPSGSYQDLAGQSTCKSCPSGFFCDATSGGVSAPLSCPAGFFCTANTQFGSQRPCPLGTASNKTRLVAASGCDACPSGSFCGSTGLTKATGACSAGFVCYSGASVPAPTDNTTGFFCPRGSYCPAGSSAGLPCPKGTFGSGVGLANAAACTQCTAGMVCASVGLSEPSGLCGAGYYCTGGAFVSNPQNSSTGDLCTVGNYCPPGTGTPVGCPPGTYSNATGLTNQTQCLLCSPGQYCGAYGLSAPTGDCSAGFFCTSGASTPTPQDGVTGDRCTVGHYCPTGTPIPLACTNGTFADVRQSSVCSACPAGQYCVEGDNFAACPQGFYCPSGTGADWVPCPIGTFNPSTGLGSAAQCTPCTGGYYCDTLGASNVTAKCSPGFFCSSGVNTPVPTGDNTGTGGACTPGHFCPLGSSAPLPCAAGTYNPDTGASECAACPAGYYCPQGTVDYTGNTCPLGHVCPEGTGADRESPCPAGTFNNRTGAVSLLDCFPCAIGKFCGSSGLASPTGFCDAGWYCNGSATTARPTDPETGGQCLPGTFCPTGSFQPTDCTAGRYCATAGLATPTGNCAAGFYCKLGASVPNPTDGVTGDRCHAGQYCVQGSQSGVDCPSGTFSNATQNTALSNCNQCTPGFYCADAGLTVPTGHCAAGFFCPGGQDVAAPLATRCTIGNACPIGSSTPQRCPSGTFTDIPVQSSCKTCPAGYYCDATAAGVSTPTECPKGFYCPAGTKFSNQHPCPAGSYGDKTRLQLASQCTLCPSGYFCVSPGIDKPTATCDAGYICLSGAFSSHPTDNVTGRSEELGDCQPCPRGRFCSVMGMSDPATAKPCSAGFVCTGGARSPEPGSDEEGYICPAGRFCPQGTVAELGCNAGSYNPNTGQGECVVCPAASMCEAVNMTSPLPCRAGFFCPEGTAIPRPCPMGTFSPSTSLAASDQCLGCSTGMYCAQPGLIAPTGPCSAGFYCLGGATVSNPNGTDGVNGPCPKGSFCLEGTTAPEACPVGHMAPNVGSAALADCVPCDPGTFCDSKGLSSPSGPCAAGYFCPPTAGSSVPNPDAFECPPGYFCPSGSSHPIGCPNGTYTATSVKAECDPCPAGYFCLLNATTPLICPVGHFCDDGTGAPPPCPNGTFSEVTGLTSVSGCGTCPAGSYCVGGRIVDQCAAGYICRLGCDTPTPDGVACGELCPVGHYCKKGTLIPQACPDKTFRSNPGGAKDTDCAPCQPGYMCFDGDPVMYPCATGKYCPYQSDPTDCPVGTYRDVTMGVNTTDCFECPASYWCRFPAMSNFSSSPCPIGHYCERGVLEPTRCPPGTLRNTTLAGQISDCQQCFGGHYCPVGSTSANPCKGTTYCPAGSSAEVPCPRRFYCHAVATVPTTCPANYYCPPLTDEPIRCPHAHYCPMGQDVPILCDAGYKANFTDDRSSLHAACIMCPAGTYGSHPNRSTCDTCPKGYYCPPGTQYATQFECPYGNYCPEGSGFPTPCPPATFGPFTLSFNLSQCLPCTNNTYNDQYGQRGCFLCGSSATSGPGAQTCECTGAFRSFQKSDASCQCKPGYLFYDENFDLGTGDSEVDCQPVVDPLCTPDEIRSSITRQCVKKSAASTFCEQFCGAAGGSLDESLGVCDCPTVVSEDSLCNATCRAAQIYLEIVPTSPTKVRIVNPVSGAVAIVDSTQIPGISGSFVCNGPQVCRINLLQMRTDGPTAVFNSEVDYFVTLLQNADGVAASSSSNSTRRRRDVSVAATDGIRNPIVCVVQFEMVIFDLSADRSHFPVYDKDNLFNTNPDFDYGAFRQLGDLMSKSNATISKFVHSFGVPGVYIFSDNADKTLLTTLVVVDDTSTCDVFGTSRVAPMTITNLVKAAVFQGSTPNVEPNWTIIFAALGGLAGLITVLICVVIWLRPKSWGYGLAEAFKPKYRRINAPPATVYLTNKGDDSEGVAGGLQAADTRLLALEGRGSGEGAAVDDGMDALSRKILVEDFNVRTLYDKLEDQTIHVTAQLSKQQSDLRAFYDRIGKQTEELREMVATLDLSALLKQRKERRQVVKALEREAAAAAASDSHDGQSGAKGAADGPKTETMTLDREARELDLMASLSELIARLTHPQHMLAAAAGQSYTLGPTSLLGVPTLPGGALDMSAAAAAAQRAAAVGAVSSLMTPAVLSEDEPKFVGIGKESSVLQGRAAAPGGEGVSIVANASFSVSGAPDAATAASIEFVNKQKEIMKIQNAEVLQVERALQEDEGRQMDAQVKDLNAVRDAAIAEAEEKLAKKLAVPGLSPEEVAELMNRHHEDIDKLRGKLDLEKERQQAALRERLKQQRLKKMADLQRAQEAAAAAAGLKAAPLAVEAAVVGEELRLHECQQEAVLVDLEREKVAKDREMQIESNMKKEDAAAELVSDALDAMGGLNEEQKERILRGGEKAMAVFAKTLAERRDAQEQLLRKRMSARKVTKLAQLQKAQEEERKAYQELMEEEEFTEEAKTTGLKALDERHRIERDTLTTELDIEEARAIAVVYEAAAKTRMVEIQEQAKRTVMDAAIHANLTEEEKRKVMQLLVDNMKEADRTVDASRLRQQQSLAMKLQARKRLKEQQALRLAEEAAAKRLVANQAKVLSDIASQSLGGTATAVVVPEVRLPSAPTVEEESLHRQQERLQHDMDARHEEESRSLAEKLDKDATHEERSASEQLSLKKEQILRERKNRMAAELAARTDLSAEDMQRMLELHHRELGELEHSLDQEKARQEAALREKLLSRRAKAKDAQQRRQEIEKRKELLEQRREVSDLRTQQVKEAEKAAMIAGIQENSPDQAEQIIQAVLERRHQREAQDLEREYEEEKKVAVDLAVQALLDRADQERDKLTTAHEAQMRELMDSVGSIPEDEVEHKRTQLLNRQQIELSQHDRKYADERRRLEQDSLAALEVKFAHARLSLRERQIQEFAEALKELTPEQALKNGRPEEAEAAARGLEELRMNLESERIANEERIREEREAFEAEEKRRMDEELAAFDKELDDERKKESERTNKAIDELTKRKERLLEERKTKLRDEISKMGEVSVGDRDALLKQHKEELAKLENALDAERIRQQAVLKEKLARKRDEKRKLKMKQIEAESADRLQEEEERLREDRQRVKAEEMRVIQETVAPSLAVVVPLTPQVYVTNSVEASPVKPAPQQPLSAAALALSPMMRPAVVPQAGFGPSPAMLQIIPQQQQLQVGQPLPAMSDAELFELVMASPLYEKLKELEAMLRRRQPGGNGSAPASLAASRLPSSQAPAATGVPLSGIPGNYEPYVDPRDAKWSCEGQLVPVDLADLAPKEFVVYKFGLFVIDMVSVHLRVAPISLLLASKLPPNANSRNAFRNSVHYDAGNRVAFVRRERLETVGELLLLLTHTIAHVKVGQMADDLDHAFTTEFHRALRLCLEDMFFLRGRRQQGVEMGGQKHALSIVEAMFDRAKTTTDKAPVVAELLELRLASADDQDSAHDTLMERLEKYGRFAMGASLKRHIGRIEAEFAGEDLTNSLSVAEVERRIASLGSSRRSDAPPDGAMASRSTAAAAGASGSARPQPLVRRGSLKGSGVEKPPSDPVAYRNFVQGRVSELHDDLDTANAEYIALMKQSRDLNNAVRALEKELRVEMDVLGSISDGDAERFARQQAIVKEATAKLSKVRSNLGNVNARQDALSRRIARLKEDVHAKQADLNAGARV* # PASA_UPDATE: g13929.t1, single gene model update, valid-1, status:[pasa:asmbl_928,status:3], valid-1 NODE_1241_length_12807_cov_49.815 . gene 6183 9295 . + . ID=g13929;Name=g13929.t1 NODE_1241_length_12807_cov_49.815 . mRNA 6183 9295 . + . ID=g13929.t1;Parent=g13929;Name=g13929.t1 NODE_1241_length_12807_cov_49.815 . five_prime_UTR 6183 6507 . + . ID=g13929.t1.utr5p1;Parent=g13929.t1 NODE_1241_length_12807_cov_49.815 . exon 6183 9295 . + . ID=g13929.t1.exon1;Parent=g13929.t1 NODE_1241_length_12807_cov_49.815 . CDS 6508 9213 . + 0 ID=cds.g13929.t1;Parent=g13929.t1 NODE_1241_length_12807_cov_49.815 . three_prime_UTR 9214 9295 . + . ID=g13929.t1.utr3p1;Parent=g13929.t1 #PROT g13929.t1 g13929 MSSDNEIVAKLLASLREQVTTAGNAAQLASANRAQCVRLGLKARSLILSVADVFKEGRVFDDDNLEALREAIKTVAEQIDRYVSETWVMAAFSNGTDTATFDSIGELLCVCAGSLGVLDHLRSNAAFLSAYDDSESATADLDALRRKRQELTDLVRFKIASSRLNAPQLPHPSVTASTMNLSLIAPGGGGGSAPPNAATFGLPEEVLQSIQYQFHHVLGRREGSRSASRTGSNSLLHGSSSGLNQMSSQTNLSGAFAACSSALRSSSSTLHDGSNVAAHARALHDGVFGLHSSTSDLRPRSSMSGIQESAPLERIDSGMRYGRPLNETEISTALDVRFYNIECLERLGKGPTGEMWIGLVGGEKVAIKRLGRIRFTQDAISELRRDGALLNGLEHPHIARVLGVCVEPERACIISEFSRNRCLAWVLHSPATAAEECRASLTWASRWQIVRDIADALAFMHGLLPPMLHRHLRSSQVLLGPNMRARITDFGMEKIRETASIAAANALLAADASFPMKVLATPATPIPKTGEDPAFPENTVKAMPANAPLVRTDTAEEAVDGRPSVSVKVDAAPSYSNASAVSMPAEPDETSGHNSPAVEENPEFVAAVLSSRASPHQFTRKLVRAIDAEWHGAQATAYIAPEVLAGSSATVHSDVYAYAVILHELASGERPYGNSPSSAVRVAALAGDRPHIDGNWPAVYASVIADAWKTDPKTRPSFFECLARIDAVNASDGDSRKGSRHNCASPLRSESASSSVKSRRASTERKTSILKTEFDAGYIPARASSAGPTEGRRASADITASSQNVARSSSVTSMGRRTSLALDIQDTLPVRMGLWSMVNVCDWLRANKLGAYVNAFETRDITGVQLAVVTEDELAAMGIEREAHRRKILDLVRSQLRRQDD* # ORIGINAL: g13927.t1 original gene structure, not modified by PASA NODE_1241_length_12807_cov_49.815 AUGUSTUS gene 814 2343 . - . ID=g13927;Name=g13927.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS mRNA 814 2343 . - . ID=g13927.t1;Parent=g13927;Name=g13927.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 1961 2343 . - . ID=g13927.t1.exon1;Parent=g13927.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 1961 2343 . - 0 ID=cds.g13927.t1;Parent=g13927.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 814 1840 . - . ID=g13927.t1.exon2;Parent=g13927.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 814 1840 . - 1 ID=cds.g13927.t1;Parent=g13927.t1 #PROT g13927.t1 g13927 MSFTTAGAIVALVAVAAAAFFGSDIWSVGWSAGVSPPPHSPSSEATPVAEIDAWDVWSLVGIPPATIVRIQWDTVKEDFSEHIKAGQPVIVEGAVSDSDDTCIRQFIPPLLHGTRLSRRAVIAKYNDGAPLAAARAGEHIDTHDDSLHLSTTVDDIDRECGDGHCTWSTVLTASGLLGDGHRLPQWLSATFGWTQHPVFRDMADDRLPLDALLELNVWTAQTATSLAMDVRHHTFFMFESVAKQQGTDAHVRVLLSPPSEWMASMRTYPWMHPWAGIVPPDAVDGDISAALVAVDVHPGDILYIPPGWFRRFERPWTGIGASVTFDVPLIARVEAASDDILSFLGLRRGSARSFYAAQKLVRRLRRLPKLWGATYDPVKDLAAQYRLVFGLSHISSFQGCLAPDDPRGLHVGELYPRLDAAVDHYENLMRAIGERHPGAERIALANAVERAALAGVPIDHVPSFLSACA* # ORIGINAL: g13928.t1 original gene structure, not modified by PASA NODE_1241_length_12807_cov_49.815 AUGUSTUS gene 3368 5227 . + . ID=g13928;Name=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS mRNA 3368 5227 . + . ID=g13928.t1;Parent=g13928;Name=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 3368 3597 . + . ID=g13928.t1.exon1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 3368 3597 . + 0 ID=cds.g13928.t1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 3737 3811 . + . ID=g13928.t1.exon2;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 3737 3811 . + 1 ID=cds.g13928.t1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 3923 4057 . + . ID=g13928.t1.exon3;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 3923 4057 . + 1 ID=cds.g13928.t1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 4197 4404 . + . ID=g13928.t1.exon4;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 4197 4404 . + 1 ID=cds.g13928.t1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 4661 4800 . + . ID=g13928.t1.exon5;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 4661 4800 . + 0 ID=cds.g13928.t1;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS exon 4948 5227 . + . ID=g13928.t1.exon6;Parent=g13928.t1 NODE_1241_length_12807_cov_49.815 AUGUSTUS CDS 4948 5227 . + 1 ID=cds.g13928.t1;Parent=g13928.t1 #PROT g13928.t1 g13928 MPLVLQINFDAFARNGISRASETPRHDNDFETTVSLVDHVGSGGRQADDYDDDGYEDRRGSRHDTPTQGLNVWSLWRGLNIAFLFYLVPSIVILFLVLLMEWHQRCDGLTHAWAIGQIVIQALQFLNTVLFIDRLPNPRAARNGNFRWRRVIVPFFFARLMNVVFIVWYVIGTLLSWKSIGGECAFNAPLLVSVIWWMSVVHSVGIACVALFWCCVPCVVAGYFLARPDDDDTESGSRAASPEAIRGLKSRTYSTGMFKADERCAICLGDYEDTEVLRELPCGHIFHLRCVDAWLPREKSCPCCKRDIDKPAPVTPGGSGKQMNGMSNQASTPSISGLQSSGAQHQADKGGIMDV* # PASA_UPDATE: g13930.t1, single gene model update, valid-1, status:[pasa:asmbl_927,status:12], valid-1 NODE_1241_length_12807_cov_49.815 . gene 10420 12807 . - . ID=g13930;Name=g13930.t1 NODE_1241_length_12807_cov_49.815 . mRNA 10420 12807 . - . ID=g13930.t1;Parent=g13930;Name=g13930.t1 NODE_1241_length_12807_cov_49.815 . five_prime_UTR 12806 12807 . - . ID=g13930.t1.utr5p1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . exon 12697 12807 . - . ID=g13930.t1.exon1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 12697 12805 . - 0 ID=cds.g13930.t1;Parent=g13930.t1;5_prime_partial=true NODE_1241_length_12807_cov_49.815 . exon 12297 12395 . - . ID=g13930.t1.exon2;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 12297 12395 . - 2 ID=cds.g13930.t1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . exon 11978 12073 . - . ID=g13930.t1.exon3;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 11978 12073 . - 2 ID=cds.g13930.t1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . exon 11631 11729 . - . ID=g13930.t1.exon4;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 11631 11729 . - 2 ID=cds.g13930.t1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . exon 11326 11421 . - . ID=g13930.t1.exon5;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 11326 11421 . - 2 ID=cds.g13930.t1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . exon 10420 11103 . - . ID=g13930.t1.exon6;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . CDS 10994 11103 . - 2 ID=cds.g13930.t1;Parent=g13930.t1 NODE_1241_length_12807_cov_49.815 . three_prime_UTR 10420 10993 . - . ID=g13930.t1.utr3p1;Parent=g13930.t1 #PROT g13930.t1 g13930 FTGIAVGYDSPGPKYDTRPPSAHNGPSLKGRTEYTGGRSTSPSPADYRPEAYRPSSPSPSIRSRIPVKNNGYDSPGPKYDTRPSSAHPGGFSIQGRLDPPGVRSTSPGPADYGYAESPRRGGITIAPRLKNQEGHSDSPGPAHYGRVDGPRPRSGIIITGRVKQRSTREGPGPGQYSIVDKRGGGFTMGAPYSSLSPFAYSF* # PASA_UPDATE: g11796.t1, single gene model update, valid-1, status:[pasa:asmbl_245,status:12], valid-1 NODE_1067_length_14256_cov_44.6927 . gene 7347 12291 . + . ID=g11796;Name=g11796.t1 NODE_1067_length_14256_cov_44.6927 . mRNA 7347 12291 . + . ID=g11796.t1;Parent=g11796;Name=g11796.t1 NODE_1067_length_14256_cov_44.6927 . exon 7347 7550 . + . ID=g11796.t1.exon1;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . CDS 7347 7550 . + 0 ID=cds.g11796.t1;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . exon 8212 9218 . + . ID=g11796.t1.exon2;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . CDS 8212 9218 . + 0 ID=cds.g11796.t1;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . exon 9328 12291 . + . ID=g11796.t1.exon3;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . CDS 9328 11920 . + 1 ID=cds.g11796.t1;Parent=g11796.t1 NODE_1067_length_14256_cov_44.6927 . three_prime_UTR 11921 12291 . + . ID=g11796.t1.utr3p1;Parent=g11796.t1 #PROT g11796.t1 g11796 MSDFDDDDFYEDDDDDNGDWEDGQSVGSAGSSRFPLPGYLAKIDNDELVALIDKMKLGETVSIDPKEAAALFAAAVIGDTGMVSMLLDAGVDKDLVVAGESALSLAISNERNDAARLLISRGVGRSIPPSDEGSIAHYLAVAIRAENADIMRLLIDNNASVVNVEYSGNVPLHAAIKTGNPAILAELLRVSSVKLDALHANRTPLAAAIASRKYGLARSLIERGASVARALACFAGEFKGVFDYCKGDTVGEELSILLIKNGANVLDCGRVPTPSQVDTAVAYATAATAVDLAFAACCLGRGAAVDVLVRKFPAVQAWARTPAALYTAVHCENDDALKALLEVGVPDPTGAIVWSRRLRTRKTNSVASDDSDKETVQSDTTVEEDKEPGGDVAVAECNDGLLERIFAMTGNGNRLGRRTACYETALHAACAANYVNGVAALIAGGANASARDSAGMTPLHVHSCERNPFQQPRSVSDVDVIGLLVGAGADVNARDLKGRTPLHYAVTLRPEIVQRLLFFSADLHARDTSERTPLLSALRPAPVMVTLNTILALLEAGADPNARDAKDRTPLHLAAVNSQDSDGAILTGLIECGVQVDALDAKGRTPLACLNSANRHRKHGAISVLVQAGARLDVLPPKILWGAYFAKPTSQCLAALVRAGLLNIDWDGCTVMHAAMSARQLDVVTDLIAAGAPIDTPSSIALKSPLPSCAAQSTPLHVAVTISPRSGFGVGSSGREALIIKALINAGVDMQARDANGQTPLDIALMHSKGEAVHILVDGEMARAKHPRDLTPTGVAWCATSDAIRLRQMFELGVSANMVVDGASLLHYACVSPTGAESMQVLLERGADFSAVDNNGHSPLDYIFGTGDSVQRVLYVFSPGRNLQNLMSTQEGRKLLCATVDAHPHLAKQRMMYPAVQHARNGGVEFMRALLRAGLAVNFAIPHASINGQTALHATCHGNFEGLEMLRCLLDAGADPNAVCANGLTPLHYLATARFQSKEESVGALQLLVERGANMKALNRQGDSFWELAASHSSLSGWINIACDKLGLDAAGIDGNTLMSLVYGVGASREAIERLLSAGVSMDIKGSNGESPVYLYSQHGSDVEVLRLLIERGAGAAEKDTKGRTALHMCVLNRNCRDAPAFITAVLAAGVDPAIADSMGRTAYDTAVLEGNRLCATHLVSVGANVSADATAIAAHARQLDMVAACRNGDVRLVESLLTGGKAALLRKCHVDGYSVSPFFLLIDSVGAEDALAVVEMAATVAATAFA* # ORIGINAL: g11794.t1 original gene structure, not modified by PASA NODE_1067_length_14256_cov_44.6927 AUGUSTUS gene 3533 4014 . - . ID=g11794;Name=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS mRNA 3533 4014 . - . ID=g11794.t1;Parent=g11794;Name=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 3910 4014 . - . ID=g11794.t1.exon1;Parent=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 3910 4014 . - 0 ID=cds.g11794.t1;Parent=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 3780 3814 . - . ID=g11794.t1.exon2;Parent=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 3780 3814 . - 0 ID=cds.g11794.t1;Parent=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 3533 3596 . - . ID=g11794.t1.exon3;Parent=g11794.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 3533 3596 . - 1 ID=cds.g11794.t1;Parent=g11794.t1 #PROT g11794.t1 g11794 MLKRGLHYFALNALWILPFSYFVGMMGKTVMDARRDAKSHRLNFEKILNSDDIERLEKEREMYLKGR* # PASA_UPDATE: g11797.t1, single gene model update, valid-1, status:[pasa:asmbl_247,status:12], valid-1 NODE_1067_length_14256_cov_44.6927 . gene 13141 14084 . - . ID=g11797;Name=g11797.t1 NODE_1067_length_14256_cov_44.6927 . mRNA 13141 14084 . - . ID=g11797.t1;Parent=g11797;Name=g11797.t1 NODE_1067_length_14256_cov_44.6927 . exon 13931 14084 . - . ID=g11797.t1.exon1;Parent=g11797.t1 NODE_1067_length_14256_cov_44.6927 . CDS 13931 14084 . - 0 ID=cds.g11797.t1;Parent=g11797.t1 NODE_1067_length_14256_cov_44.6927 . exon 13141 13703 . - . ID=g11797.t1.exon2;Parent=g11797.t1 NODE_1067_length_14256_cov_44.6927 . CDS 13303 13703 . - 2 ID=cds.g11797.t1;Parent=g11797.t1 NODE_1067_length_14256_cov_44.6927 . three_prime_UTR 13141 13302 . - . ID=g11797.t1.utr3p1;Parent=g11797.t1 #PROT g11797.t1 g11797 MKSVVSSSKNRTGELVVGTLLWMAPELLRCQLAGESVSHEYLTEKCDVFAFGVVLWEVMARQLPYGGGDLLSNPASFSDKLCNIGMRPEPVPETCPEWVSLMCACWDDSPSLRPSFEDIVACLEDIRTRCQSWPDPAIPLLYAGSAEYDHPPAGGSDGLEAAPPPVTDAAHSEGGEEAHRSADE* # PASA_UPDATE: g11795.t1, single gene model update, valid-1, status:[pasa:asmbl_246,status:12], valid-1 NODE_1067_length_14256_cov_44.6927 . gene 4367 6495 . - . ID=g11795;Name=g11795.t1 NODE_1067_length_14256_cov_44.6927 . mRNA 4367 6495 . - . ID=g11795.t1;Parent=g11795;Name=g11795.t1 NODE_1067_length_14256_cov_44.6927 . exon 5424 6495 . - . ID=g11795.t1.exon1;Parent=g11795.t1 NODE_1067_length_14256_cov_44.6927 . CDS 5424 6495 . - 0 ID=cds.g11795.t1;Parent=g11795.t1 NODE_1067_length_14256_cov_44.6927 . exon 4367 5062 . - . ID=g11795.t1.exon2;Parent=g11795.t1 NODE_1067_length_14256_cov_44.6927 . CDS 4962 5062 . - 2 ID=cds.g11795.t1;Parent=g11795.t1 NODE_1067_length_14256_cov_44.6927 . three_prime_UTR 4367 4961 . - . ID=g11795.t1.utr3p1;Parent=g11795.t1 #PROT g11795.t1 g11795 MEMNADDAGGASLQGLAELQSLAGLSGAGGEASEYVDEKGGISATLGTATADSTVTGKLDGVGNGASALSAGHAAGGHVGGGASEPKRPNYVLKYTMQGHKKAISSVKFSPDGKWLASSSADKLIKIWGAYDGKYEMTIEGHSQGISDISWSADSKYLASASDDQTVKVWDVSTGKCVKTLKGHTNYVFCVNFNPQSNLIASGSFDETVRIWDVKTGKCLRVLPAHSDPVVSVHFNRDGTLIVSASYDGLCRVWDTATGQCLKTLIDDDNPPVSFVKFSPNGRYILAATLDNTLRLWNYCTGKCLKTYTGHKNEKYCVFANFSVTGGKWIVSGSEDNCVYIWNLQTKEIVQKLEGHSDVVLCCACHPTENIIASGALDNDKSIKLWRSDS* # ORIGINAL: g11793.t1 original gene structure, not modified by PASA NODE_1067_length_14256_cov_44.6927 AUGUSTUS gene 114 3011 . + . ID=g11793;Name=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS mRNA 114 3011 . + . ID=g11793.t1;Parent=g11793;Name=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 114 524 . + . ID=g11793.t1.exon1;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 114 524 . + 0 ID=cds.g11793.t1;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 731 2121 . + . ID=g11793.t1.exon2;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 731 2121 . + 0 ID=cds.g11793.t1;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 2250 2561 . + . ID=g11793.t1.exon3;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 2250 2561 . + 1 ID=cds.g11793.t1;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS exon 2831 3011 . + . ID=g11793.t1.exon4;Parent=g11793.t1 NODE_1067_length_14256_cov_44.6927 AUGUSTUS CDS 2831 3011 . + 1 ID=cds.g11793.t1;Parent=g11793.t1 #PROT g11793.t1 g11793 LLNVQAFSMLRAWLRRQHPVVTGQSAPAALAPLSATASAMGTPTSPSTLTYTVLNSSGNNNNINANINVNNGVNSGVSSAFFNTINNSSPTRDNVVDAHSPIDPGLLNAIHDYCVRVIEQSECRVGPSEGSVKAADKRLCEAASVEAIRTLDHLCSLDASLIPRVFPTFRRLFTRLTGELSGAQAAGPSLSASRSASSGVLHSIGTASLSPHYGTSASGIALSSLALVRFFVVHGDQMAYDSESVVRSFFCDVFPASFADPCAVDAAFDALLSSDVRGSSALAAHAQAIARRFFPILLRAVAWHPRTLMSEGALLLRLLFAPSSHDTHTQSAAPPMMDNKAARRSIVIEVVNTLLDLPALAAYHELRRDMGEASSFAHAQASGPTLASGTSGGVGGQTVNLSVSSGGGMGHNQWPQLLRPVDAYLARCEAGIIERGESGVASTSRALDWLASSRQGTGPRAMGAAFTATSLIGALFEAIADGGDAALATSVVTQLLSRVASLYGSKGYRSAVCTAVADHLTYLFEAYPSLACDLRRPIVDFIGQSRGRRDARLLMRLVWLVGERASPQVDASCTPDIIASYHEAIELFAYEINTELPAYCRGPSSTAKTTKGGVDDFTSSNDTTYTPALMCVVLSSLAKLSARCQDLMPRVLLCLSKVTKQHARPEFAGAADVQGGAGTFGEGEGRPAHVLRRANELWNITQMPSVAAVALGPSRLDGNTDYVAEHSSPLSVLLHATRMFIPLDAQSPGAVAPAVSAATAGSSI* # ORIGINAL: g7840.t1 original gene structure, not modified by PASA NODE_1922_length_8521_cov_41.5008 AUGUSTUS gene 5520 7996 . - . ID=g7840;Name=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS mRNA 5520 7996 . - . ID=g7840.t1;Parent=g7840;Name=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 7563 7996 . - . ID=g7840.t1.exon1;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 7563 7996 . - 0 ID=cds.g7840.t1;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 7358 7418 . - . ID=g7840.t1.exon2;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 7358 7418 . - 1 ID=cds.g7840.t1;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 7089 7184 . - . ID=g7840.t1.exon3;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 7089 7184 . - 0 ID=cds.g7840.t1;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 6628 6804 . - . ID=g7840.t1.exon4;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 6628 6804 . - 0 ID=cds.g7840.t1;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 5520 6404 . - . ID=g7840.t1.exon5;Parent=g7840.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 5520 6404 . - 0 ID=cds.g7840.t1;Parent=g7840.t1 #PROT g7840.t1 g7840 MAPSSHSVQDVPILPKWSLQYDISAERAFLAAGAIFHYVRITSCELTYVHGGVFPVLELAAAIGMLRATWLSRWQLFPGYASLLLQFALALEIISPTSSTSIAISTLSCLLFGLAALLAYVMPVVVLPVPQGPHGVGTTIHNWIDQSRPEWEHGKSGGCRMLVVQIWYPTDVVGDDTTENAPYFPDMSIQGPSLAKSFSMPSFILNHFGLTSGHARKNRPVVSNGRTLPVLVFSHGYSGFFAQNTILCETLASHGYVCVAVNHTYDAQVTVFEDGTVAGFKAAPPAGMSFADLWRMRAHHLEIRSSDVSFVIDQIAALNSGTRDARGILGGIKGRLDMGKIGVFGHSFGGGTSIKAALHDNRIGACFGLDAWLFPLSDVERRACGRVPVFLLQQEAWAGTEEFLCHNDDDAAAVMRAAVGLPFGGTSRVYDDAIEVAHRRSLDAIASRSSAEATSRMLSRYVRIVGTKHFDFADLSVYAPVITRLLGMSGVVPGSRIQQVMIDYTLAFFDTALGVNRDSSSSEKGSRPFVGVDAKYPEAHVIVSSEAIRG* # ORIGINAL: g7839.t1 original gene structure, not modified by PASA NODE_1922_length_8521_cov_41.5008 AUGUSTUS gene 4005 4829 . + . ID=g7839;Name=g7839.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS mRNA 4005 4829 . + . ID=g7839.t1;Parent=g7839;Name=g7839.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 4005 4199 . + . ID=g7839.t1.exon1;Parent=g7839.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 4005 4199 . + 0 ID=cds.g7839.t1;Parent=g7839.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 4386 4829 . + . ID=g7839.t1.exon2;Parent=g7839.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 4386 4829 . + 0 ID=cds.g7839.t1;Parent=g7839.t1 #PROT g7839.t1 g7839 MLSSARTCLAAARLPSRRPLASLVRSFASETQAEPQTQATADAAKDAKPADGKVDELTKKVAELEDKYRRALAETENVRQRFKREAENAKTFAIQGFAKDLLEVADILKLAVDSVPAAKRTELFAGNADFKTLHEGVSATQARMHKIFSKNGLEVCDPTGAKFDPNEHVAMFEVPTQDKGNVGNVAAVQIVGFKLNGRILRAPSVGVFKAQQ* # ORIGINAL: g7838.t1 original gene structure, not modified by PASA NODE_1922_length_8521_cov_41.5008 AUGUSTUS gene 1046 3491 . - . ID=g7838;Name=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS mRNA 1046 3491 . - . ID=g7838.t1;Parent=g7838;Name=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 3359 3491 . - . ID=g7838.t1.exon1;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 3359 3491 . - 0 ID=cds.g7838.t1;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 3092 3234 . - . ID=g7838.t1.exon2;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 3092 3234 . - 2 ID=cds.g7838.t1;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 1625 2895 . - . ID=g7838.t1.exon3;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 1625 2895 . - 0 ID=cds.g7838.t1;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS exon 1046 1214 . - . ID=g7838.t1.exon4;Parent=g7838.t1 NODE_1922_length_8521_cov_41.5008 AUGUSTUS CDS 1046 1214 . - 1 ID=cds.g7838.t1;Parent=g7838.t1 #PROT g7838.t1 g7838 MALQERRDDAVHPGTIGEAIDAIDRLVSAYKDQWQLGVDEDFGKVSPFGTLNEHAQYAALRTHIRTVKDAVATLSHWARDGKPISKLHAASKEAAQARANRLKLAIVATQCRTALRAGIAEAQAELADRRPSLSATKDGVDDDVKRKTDGIVAAITEVACRRKVKCVELPGDDDQRIFMLAAASHLVEITVNTAVGAVTGATLVHADTEEATDGELVRRLGEHDAASALDTCLQSLEWMYAPAVPKAQKALLYKALRAVSADAVAIEKEEMGSARACEAAKSESQLPLRSFLAPYFAVLSRGGGLVSANSASRGPQLVFFAHPRIAEFLNRSANMGSALGEDAIRRLFAALGVVGDIGIEDGRSFPLMSVPLFLGRNAHSVLGLSVHGAPARSVTQADISSIERAGEAIPATGSGKEEEELNAVTSGGNATLSSIMESGMSVAQVGDENTSLLEVVEGRKTLQEALDPSMGVDRVSPAPDAPHMGSRDVEMADAGGVSCDSGNGGVSYGPGIPSSHGESLIHLHFGPELEAPDVAANFVLRLRADMPVAVALARQLDAVVWGGSVSLSYAF* # ORIGINAL: g11273.t1 original gene structure, not modified by PASA NODE_4271_length_1902_cov_41.2255 AUGUSTUS gene 77 1902 . + . ID=g11273;Name=g11273.t1 NODE_4271_length_1902_cov_41.2255 AUGUSTUS mRNA 77 1902 . + . ID=g11273.t1;Parent=g11273;Name=g11273.t1 NODE_4271_length_1902_cov_41.2255 AUGUSTUS exon 77 1431 . + . ID=g11273.t1.exon1;Parent=g11273.t1 NODE_4271_length_1902_cov_41.2255 AUGUSTUS CDS 77 1431 . + 1 ID=cds.g11273.t1;Parent=g11273.t1 NODE_4271_length_1902_cov_41.2255 AUGUSTUS exon 1668 1902 . + . ID=g11273.t1.exon2;Parent=g11273.t1 NODE_4271_length_1902_cov_41.2255 AUGUSTUS CDS 1668 1902 . + 2 ID=cds.g11273.t1;Parent=g11273.t1 #PROT g11273.t1 g11273 FGPEVPGVYQYDFEKTEYLGGDLVIDSNADLRIASPPHSMTVIMGSIRVTNNPLLELFACDVPRPSDYSSDLNLHASAPGSGFLSETHNTTSRALGNRCNLSVAGALSFSNNPRLSVLHAPMTLRGMAGIDLSNNPALKRVVVKAGRIFGSLRIEGSNIIQFEGVENITTILGSVSLLNADVVVLESLTSLIEVRGSLQIRVAKVGPLFLQQLRRVYGSLFLFKLSGCPVIGEPENATSYVSNSTTAHQVVPLLQKLEYVGINFGLALNSDLVTIAAGAFPALSKVGGSLLIAQNPELVNVEYGAFPSLASVGGVVVFGLHPRMRWMDGLNNASVIGGLYVIGNPALDAVTGLRAVRTIGPLVDPSFSLPGFDVAAFNNLTAQGIVVGILNNTVLTSIRGLTVSAVIGRVHIVTNPRFCAYDVDLTLAIVAPPGVAASSMSRVVGNKETWCRCTGRTLESPADFVTMSGCIIVHGVLRIVSHLANADLSPLASIHSVDGDLIFESIRNVRRLQGLPLLSWVSGSLTVAN # ORIGINAL: g2978.t1 original gene structure, not modified by PASA NODE_5135_length_1006_cov_25.899_potentialcontaminant AUGUSTUS gene 41 1006 . + . ID=g2978;Name=g2978.t1 NODE_5135_length_1006_cov_25.899_potentialcontaminant AUGUSTUS mRNA 41 1006 . + . ID=g2978.t1;Parent=g2978;Name=g2978.t1 NODE_5135_length_1006_cov_25.899_potentialcontaminant AUGUSTUS exon 41 1006 . + . ID=g2978.t1.exon1;Parent=g2978.t1 NODE_5135_length_1006_cov_25.899_potentialcontaminant AUGUSTUS CDS 41 1006 . + 0 ID=cds.g2978.t1;Parent=g2978.t1 #PROT g2978.t1 g2978 MNAILAVVKHFRTEEPQMVFIMTGTVPADGCDTASASDGGASGGGASGGGASDAGGSGEAPQVPFSKSGRPCSVPAALWTEICAPTCFGAFRVQLTNSGNCGVGKFSQKTVEVMTACQTAWNKQKTVSSDEGNRLDRCNNAVRTILESDRHSDEQTTDASAAQCVGLEEVAWERRFCKWEGNRCVDSDGDRCSEFTGDKYTCELRGCVVARDDGSCKSHFGFGVKGSKLGVTLNPFKNDKAVDLENLLAAVLPVLFGLVDTINRKKTLEPRKASDRWKLRKEILQFFFNAGFAYYCEKESNRAISDGLCAAIAGNKPVAVCH # PASA_UPDATE: g6599.t1, single gene model update, valid-1, status:[pasa:asmbl_6684,status:12], valid-1 NODE_3890_length_2562_cov_42.3675 . gene 119 2553 . + . ID=g6599;Name=g6599.t1 NODE_3890_length_2562_cov_42.3675 . mRNA 119 2553 . + . ID=g6599.t1;Parent=g6599;Name=g6599.t1 NODE_3890_length_2562_cov_42.3675 . exon 119 269 . + . ID=g6599.t1.exon1;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 119 269 . + 0 ID=cds.g6599.t1;Parent=g6599.t1;5_prime_partial=true NODE_3890_length_2562_cov_42.3675 . exon 747 919 . + . ID=g6599.t1.exon2;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 747 919 . + 2 ID=cds.g6599.t1;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . exon 1248 1327 . + . ID=g6599.t1.exon3;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 1248 1327 . + 0 ID=cds.g6599.t1;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . exon 1752 1927 . + . ID=g6599.t1.exon4;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 1752 1927 . + 1 ID=cds.g6599.t1;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . exon 2173 2362 . + . ID=g6599.t1.exon5;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 2173 2362 . + 2 ID=cds.g6599.t1;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . exon 2513 2553 . + . ID=g6599.t1.exon6;Parent=g6599.t1 NODE_3890_length_2562_cov_42.3675 . CDS 2513 2553 . + 1 ID=cds.g6599.t1;Parent=g6599.t1;3_prime_partial=true #PROT g6599.t1 g6599 IYLNERECTIQRRNQKVIEEAPSVFLDAATRKAMGEQAVMLAKAVNYYSSGTVEFLVDSSHKFYFLEMNTRLQVEHPITEWTTGADIVEEMIRVAAGHQLKFRQEDVKINGHAVECRVYAEDPTRFLPSIGTLVKYREPLKGDPDVRIDSGIVEGSEISMYYDPLISKLITHGQTRDEALAKMIEALDNYVIKGVTHNIPILREVLTHPKFVKGDFSTKFLKEEFPNGFVCHELSKTELEQLLAIAATHRFTAAASKRFFANNKDSLFAS # ORIGINAL: g9653.t1 original gene structure, not modified by PASA NODE_1590_length_10320_cov_39.509 AUGUSTUS gene 163 3907 . + . ID=g9653;Name=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS mRNA 163 3907 . + . ID=g9653.t1;Parent=g9653;Name=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 163 249 . + . ID=g9653.t1.exon1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 163 249 . + 2 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 380 585 . + . ID=g9653.t1.exon2;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 380 585 . + 2 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 798 967 . + . ID=g9653.t1.exon3;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 798 967 . + 0 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 1254 1391 . + . ID=g9653.t1.exon4;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 1254 1391 . + 1 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 1555 1654 . + . ID=g9653.t1.exon5;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 1555 1654 . + 1 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 1773 2869 . + . ID=g9653.t1.exon6;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 1773 2869 . + 0 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 3001 3170 . + . ID=g9653.t1.exon7;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 3001 3170 . + 1 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 3481 3626 . + . ID=g9653.t1.exon8;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 3481 3626 . + 2 ID=cds.g9653.t1;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS exon 3878 3907 . + . ID=g9653.t1.exon9;Parent=g9653.t1 NODE_1590_length_10320_cov_39.509 AUGUSTUS CDS 3878 3907 . + 0 ID=cds.g9653.t1;Parent=g9653.t1 #PROT g9653.t1 g9653 VRLREYGSEAVEVIDNGSGIEPSDYEALTLKHYTSKIATFDDLTSVSTFGFRGEALSSLCALGKLAVVTRTAAQEAGVRLEFDSGGRIVSQAACPREKGTTVSIRDIFASLPVRHKEFTRNLKREFGKLVSLLHAYCLAVPAVKLSCTNHAGKGQQRSEVVSTRGNASVADVVTSLFGAKQSKQMEAVNVAASGSGPQFQVKGLVSRPLPGHGRSSADRQFFFINKRPCDMAKLAKVANEVYRSFNPSQYPVLVLELILPTDRYDVNVTPDKRTILLHDEGDIVESFKVGAGGGGRKVTGLYVCALCGRQNVTDSAVSVQHYLEGIYEPSRGSLELNNRQLDTLSGFTQIKAPSLPVEGRGKCCTPAAESEAHHKQSKSMRRAREETEDDEDEEEEEEAMIAEVTGSGMAHGHADGTGDAQRADGTGDAQRDDDAASRAKRRRIAAAHASGASSAADTASADAFGCVEAAVASAEQLARDAPRRCAVGIVTEAHFSMGRTRAAHDGARSSHVIDGDGRRRRFMARIDPSANAACEDELRRSIDKGAFDGMDVIGQFNMGFIIARLGRDLFIVDQHATDEKYNFEELERTTQLCPQPLICPQPLELTAAAEGVLLEHLSVFRQNGFEFLVDADAPVTKRVMLAAVPQSKGTSFGPADVDEMIYLLSESPELTFCRPSRVRAMLASRACRKSIMIGTPLSKPQMKRSPWAQRLRH* # PASA_UPDATE: g11242.t1, single gene model update, valid-1, status:[pasa:asmbl_7432,status:12], valid-1 NODE_4551_length_1471_cov_34.4979 . gene 203 1130 . + . ID=g11242;Name=g11242.t1 NODE_4551_length_1471_cov_34.4979 . mRNA 203 1130 . + . ID=g11242.t1;Parent=g11242;Name=g11242.t1 NODE_4551_length_1471_cov_34.4979 . five_prime_UTR 203 222 . + . ID=g11242.t1.utr5p1;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . five_prime_UTR 443 481 . + . ID=g11242.t1.utr5p2;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . exon 203 222 . + . ID=g11242.t1.exon1;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . exon 443 679 . + . ID=g11242.t1.exon2;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . CDS 482 679 . + 0 ID=cds.g11242.t1;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . exon 882 1130 . + . ID=g11242.t1.exon3;Parent=g11242.t1 NODE_4551_length_1471_cov_34.4979 . CDS 882 1130 . + 0 ID=cds.g11242.t1;Parent=g11242.t1 #PROT g11242.t1 g11242 MAQQSVIGLVGLAVMGQNLALNIAEKGFAISVFNRSPARTDETVARAKKEGNLPLVGFHDIKDFVHSLAKPRKVIILVQAGKPVDETIKNLSEHLESGDIIIDGGNEWYENTERRSREVAAKGLLYVGMGVSGGEAGARNGPSLMPGA* # ORIGINAL: g9682.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 22562 27439 . + . ID=g9682;Name=g9682.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 22562 27439 . + . ID=g9682.t1;Parent=g9682;Name=g9682.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 22562 25437 . + . ID=g9682.t1.exon1;Parent=g9682.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 22562 25437 . + 0 ID=cds.g9682.t1;Parent=g9682.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 25543 27439 . + . ID=g9682.t1.exon2;Parent=g9682.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 25543 27439 . + 1 ID=cds.g9682.t1;Parent=g9682.t1 #PROT g9682.t1 g9682 MPAPNLGHYGPDGNSHSQPTAHMVTFSEAVYSALQNVGEGSTSNERLSHYIANASRAHLDMADWKVVHSTEDAAAFLNQYTGECVLAFRGTHAAMHQNIGATVRDHINDAAIALGELPISRVASAKAFYQEVKEHLPDGGVGIAFSTTGHSLGGFVAEQVAYAIYNDYGTASSETFNRGSGPFPLGTSAAAKAAAGPTLVRHLVDGDIFSMHGNRSSDRIAVISHEPREDINTHKLANFAETQPVREFEIERKHTYDAWGPTDVTVGSAAEGTFQSANSPHQAPSRMPCVTGSNHVQAQLDTDQLSMLKGRGPQGGKRVRFEKRVESAASGTGSTSKTGKFQAGVTAVAIDSDGKQTTIARFEKGEYASSPVQKSSQFSTATTHKGTFRQNSRVSSSTQERVEIATGKFERLADGDTRTRLRESSTYAFQATTHEPSLAVQGQGRAEERHGAGVRIREQSDGGTTRVQEHEHSEWMKYDYVATDERGLLSNRQHLQGSGQYGMEDVSRDGTQESGLAIVSAKACALGDVDLEIERTQNVLFTAESIRTVRREYNGTTTTNETRRVNATRHTKAAIRAAGASAAQSGMAALVSTSQGRPSVGQAAKQATNAAARGFATSYATDQLKPALGEHASVTAGVAVNAVFDVAAGDSKAAARHATESVVSSVASHAFDKSISIGRTTHVANGQLFGSKIVHSESTRDHMSVPSHGVQVGAHVDRGTTIKRMRDGTQLTTQWKEVGTHAGTVGVDASIGRRSGFESTSAISRTSADGNITTEWSDRRFKNELVVGARLGDRQFSARLLPGSSTSRKYRATERADGGDLETRTGMAMRHIVKSNYALPKKNEPSDVDGVGMRATHDATANAMLADAPADGRTEHVQQRVEVHERRRRFLRHSRRSNWTDEYGVAVENNTTRNAGERNGEVFTSVSTETVASQFSDHIQHGQKTRTSEAVSSRCMKSRTLESKANGDAYVEVNSAQRLADGTTVFMNEADLHVLTEATTVADAGGKPMDSSTAVFVGGHAQHTEIGARQTVERRSAYGRHFAADHSSTSVVRQEVYLDRRAEINGESASELERVKAAVKNVGATPAATGDGAPLPAAPSTQSNGGATADEFERGHHRRATGLENKTESRRHVARDGLCINMTDTTTHTERNYAQAEGENRTYSQPHRVTMIERKVEGNAFVKNSVSTTIITEGEHGSADHKVSTETKSEKSLTAGASLALSTMITGALDALADKVTRYRRNRQLQKQGRHTEVDLVTLAEIKRDIARIGLDTGEGFFVAMAGEIAALTEQLGDGLFLAVSAIAIANLARYAVNRNDPRFDQSKLTKRGCAFEMAKGAAKSALSMIIVGAEIAHGTTLLFAVNQLAGAVQQIYTSYVKERDAGMLNCKLDVSLCIARNATEVTCHLGVAVGVGIAAEMMTAAAIAAAGISGGLIASAMLATVPAVAAWAAVRASRSLWRWYFGHPDERELRRLYYTYGLNDAPTVAQVNKVYHKLSLSAHPDRDGGSHEAFIFLAKNFKRIYELRGELKKDNDHVKTPKGSAVVGIVNLLSQIVRGKLFRRGQHEYLLLSLESDCDDAAPHDAEGEVKGS* # PASA_UPDATE: g9676.t1, single gene model update, valid-1, status:[pasa:asmbl_5122,status:12],[pasa:asmbl_5123,status:12], valid-1 NODE_284_length_28009_cov_41.8601 . gene 403 5552 . + . ID=g9676;Name=g9676.t1 NODE_284_length_28009_cov_41.8601 . mRNA 403 5552 . + . ID=g9676.t1;Parent=g9676;Name=g9676.t1 NODE_284_length_28009_cov_41.8601 . exon 403 2881 . + . ID=g9676.t1.exon1;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . CDS 403 2881 . + 0 ID=cds.g9676.t1;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . exon 3170 3793 . + . ID=g9676.t1.exon2;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . CDS 3170 3793 . + 2 ID=cds.g9676.t1;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . exon 4120 5552 . + . ID=g9676.t1.exon3;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . CDS 4120 5279 . + 2 ID=cds.g9676.t1;Parent=g9676.t1 NODE_284_length_28009_cov_41.8601 . three_prime_UTR 5280 5552 . + . ID=g9676.t1.utr3p1;Parent=g9676.t1 #PROT g9676.t1 g9676 MTPACDMLPGQCEKSCVELSVKRNACDSQRLRSSMRSLYPAISLVVVLLLCRPPHALVNADILFGQSCALTGPAADLGIELSLGIRAAFDEINALGGVRGHNLTLLTLDDRYEPVYASNNTRALVEGYNVFGMLGSVGTPTSQVAMPIAVAAGVPFIGAFTGAQLLRDPHEPLVINVRASYYDETAAMIDYLVNTLLFTRVSLFVQNDSFGQTGYDGAKRALTAMKLPIESEGRFERNTLDVEAGLASIVAPGRRPQAIIMVGTYAPLAKFVKLAKRSPLLQNAANVIFLTVSFVGSNSLRTALGNDTANVIITEVVPLPTDMSIPIVANYRRALAQTDAAALPSHGSLEGYITGRFVASVLDRVSPRLSLTRKAFLDIVYGTSVFLVDDISMGPYRNLSTVCPARVCRCNQGMKDVWAVRVDNSTGNFIPLDQARFKFYDTCFSNVADLKYPLVFAQTAPFTAISPYDAAVAAGYAKGVVDAFTYTNDIMGGVFGHRLHLLTADDKGIRDASVTNVQKFVTDNINIFGILGTVGSASTAGVAGFLDTLGSNIGVIGPHDAEIAPRTTFARRVVYTLASHRDEARAAVDFAVRGMQSQSFSIISARVDGLHDSATPTASEDAYHLRMQNVATAVTDALGNYGITPKRLSWFHNSADIDSAIQLSFFRDGGADAYFVAAEGDDLLSIVTKIRARASGASILVGSYAKPTLTSIGSASSSLLDNIYIADGLDTSPPSVAQSSLYMPPSPPRSSLANVSAQAHTEGWITGRLAVAALERSYIGQPTPAALMIALYSSFEFAVDGIPLGPLVDGTCDASSKADCQCNQAAGQAFVYSITRDGYLKRALGYEFMYASCGVENRPYVSPYDSHCASVTADSFTFADDYSAALFVNANGVRFEVAMIVIVVVVSAAAAYYTVTRPRVDFLQGRPNVPIIRRSLANYLNTLSIIVETFQLTTMVFAADLNWSVLQRIRRAFDAIGLQYEFSWHYYAMLPLASLWIAYSFVIWTGASRRIRQNRYGALLLFPVQHLLPLMGTIGYIPAVLTMLESFACVYTSDARSLMDFDCSMECWTAGHWTVASFGVIVMLLFVPMAIMTAFFWQELQLNLDVKFRPRFFVADYLIKLFMCILRVFFYRFAAPFLSTLLVLNGFLCIVVITRRPSCVPWINDVKAWAYAMTVWTALIGLISYEAGGGGTWPQLCVFLGWIALIVFTIAAIFKRHPQLFVKSTWDGRDRLRKITWLFGSLKRTEPRSGSPSLSKRSGASSGHIAPINGEISEEGWALLTSSVRKRRAEGLLSDKDADILEKACESRDPVLSSCYARCQGSPSDLLVSLRRPLMAMVVDEIVQSGWMSRGDLLSHTVSCGADTLSNGGMVLDAIAEGAAGAEPDERSVVISDDTAVTVDVEITVEPPPPLFTPAEEDAK* # ORIGINAL: g9681.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 18498 20632 . - . ID=g9681;Name=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 18498 20632 . - . ID=g9681.t1;Parent=g9681;Name=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 20606 20632 . - . ID=g9681.t1.exon1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 20606 20632 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 20343 20483 . - . ID=g9681.t1.exon2;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 20343 20483 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 20168 20210 . - . ID=g9681.t1.exon3;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 20168 20210 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 19964 20028 . - . ID=g9681.t1.exon4;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 19964 20028 . - 2 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 19535 19657 . - . ID=g9681.t1.exon5;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 19535 19657 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 19189 19273 . - . ID=g9681.t1.exon6;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 19189 19273 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 18800 18936 . - . ID=g9681.t1.exon7;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 18800 18936 . - 2 ID=cds.g9681.t1;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 18498 18524 . - . ID=g9681.t1.exon8;Parent=g9681.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 18498 18524 . - 0 ID=cds.g9681.t1;Parent=g9681.t1 #PROT g9681.t1 g9681 MEGSHKRVKGVTVEKKVLYGNLAVSLGKQADAEHTHRWTVYVRGFNNEDISTYVSKVVFQLHESFAENVRTLSQPPYEVSETGWGEFEIVIKIHFMDPSEKPVTLYHPLCLYPREDSTVVSKKILFVEHYDEIIFNDPTEQFLRALQRVAFYRKMPTHTKDHASVENAHLQKLGDARTKIQSEMTKFRSLYKDYDDEARALRDEIQKLDEAAQAS* # ORIGINAL: g9680.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 16509 17749 . - . ID=g9680;Name=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 16509 17749 . - . ID=g9680.t1;Parent=g9680;Name=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 17739 17749 . - . ID=g9680.t1.exon1;Parent=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 17739 17749 . - 0 ID=cds.g9680.t1;Parent=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 17447 17556 . - . ID=g9680.t1.exon2;Parent=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 17447 17556 . - 1 ID=cds.g9680.t1;Parent=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 16509 17179 . - . ID=g9680.t1.exon3;Parent=g9680.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 16509 17179 . - 2 ID=cds.g9680.t1;Parent=g9680.t1 #PROT g9680.t1 g9680 MNARALSTSLPIHFRYHKPSDGGLSVNISIPAPLVIRICCGDFCDRLIANNAHHVPLYGSPAPLNLWSRACAQQLDARPSPDSDEANRGDSRWHVISANHRGGHVIVASLPVGDSLSGPFVTCMTVLSAFVGLAIVARAAFAHTHSPRTADWIEILSPVATSPSGASASGRLNNTLSVRLDDAQSLRPSPHAHTLRLGASGDGYGEREGSDAVATAAAEDSRRLSGASSSCAVPEAVSNSPYAQSVRGRPVRRSAGKDVLANS* # ORIGINAL: g9677.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 5955 9359 . + . ID=g9677;Name=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 5955 9359 . + . ID=g9677.t1;Parent=g9677;Name=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 5955 6065 . + . ID=g9677.t1.exon1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 5955 6065 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 6208 6280 . + . ID=g9677.t1.exon2;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 6208 6280 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 6512 6651 . + . ID=g9677.t1.exon3;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 6512 6651 . + 2 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 6919 6999 . + . ID=g9677.t1.exon4;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 6919 6999 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 7249 7348 . + . ID=g9677.t1.exon5;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 7249 7348 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 7497 7546 . + . ID=g9677.t1.exon6;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 7497 7546 . + 2 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 7855 8091 . + . ID=g9677.t1.exon7;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 7855 8091 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 8236 8403 . + . ID=g9677.t1.exon8;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 8236 8403 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 8698 8869 . + . ID=g9677.t1.exon9;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 8698 8869 . + 0 ID=cds.g9677.t1;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 9172 9359 . + . ID=g9677.t1.exon10;Parent=g9677.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 9172 9359 . + 2 ID=cds.g9677.t1;Parent=g9677.t1 #PROT g9677.t1 g9677 MAEQKEFAFVIFGASGFTGQFVVEELARQIAAKSGSQGHAWADKSNLPKWAVAGRSEKKIKEVLATAADRLKDASIKNVPIIIADVADQQSMNNLARRSAIVLNCVGPYRFFGEPVVRACVENGANYLDVSGEPEFVEQMAFKYNQQAIDKGVVIVSTCGFDSIPADIGTLFVQKLVKAPAVITGIESYLSLHSGAAGFTGHYATYESAVHGFGSAADLAKLRKKTDTSRLPVYGQPLKRYGSIFFNSTVGRYCMPFMGSDASVVRRSQRYFHEHKELTPVQYSAYFTLPGKKAAFLFILFGTIFSLFARFQLGRKILLKFPRLFSYGLFTHDGPTLEQMRTTTFSKTFFAHGYKQLPEVGSRAKPDIRVTVKVAGPEPGYVLTPIVLVQAAFALHEERDRLPNKSGVLTPAVALYGSTIIDRLKSHGLEMSVVKSEGL* # ORIGINAL: g9678.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 10154 11537 . - . ID=g9678;Name=g9678.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 10154 11537 . - . ID=g9678.t1;Parent=g9678;Name=g9678.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 11058 11537 . - . ID=g9678.t1.exon1;Parent=g9678.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 11058 11537 . - 0 ID=cds.g9678.t1;Parent=g9678.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 10154 10918 . - . ID=g9678.t1.exon2;Parent=g9678.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 10154 10918 . - 0 ID=cds.g9678.t1;Parent=g9678.t1 #PROT g9678.t1 g9678 MTLPGLQMAIAALFLCSVALFAVPAHAAADDVNVWGFHGKTVKAEYVEPATPSVGGAVVDGTFIFTLTFDTTNTNVNALPTNAGVAGNALGQGLFVDIGTNSSCQGIRLSPTTDAQPSWTATAVFASEKLFNEAFYESCGFVRAAISNDTSKYTLTGVVQYYYRSATRKQYFFKVTPTFTRDLNAQSSIPAIIMVVPVSTNDVVATATLPSKLKICDETSSELRITVGSEVCLEQTFSSPVINRLSIDNTVSPSFNPRVQIKDGSGAAVNALGNTASSMRMVTNPAFLDSIKTNGYIRFWVNVGQITCPSNATGSAVCTLVVSSTLRYTAGARRREVGDVTSDLVATTSIGLALTVGSGATGASGGSSSSSSDNSVAIGVGVGVGVGGALLVSAAVGYYFVSKKRNLKASATSA* # ORIGINAL: g9679.t1 original gene structure, not modified by PASA NODE_284_length_28009_cov_41.8601 AUGUSTUS gene 14002 15468 . + . ID=g9679;Name=g9679.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS mRNA 14002 15468 . + . ID=g9679.t1;Parent=g9679;Name=g9679.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS exon 14002 15468 . + . ID=g9679.t1.exon1;Parent=g9679.t1 NODE_284_length_28009_cov_41.8601 AUGUSTUS CDS 14002 15468 . + 0 ID=cds.g9679.t1;Parent=g9679.t1 #PROT g9679.t1 g9679 MPHGLSRIAGLSPVLNATAADTWCRFAARMVCARHVHSQWNQQFPLAIRTRNAPDPRQQPTLVHGLPAAAFLDLKRAITTRTTITTKHSLAGTELYAEAKKAYEMSTYDCTKRARGDALRVVHVHSLKEVRAYLKETNPTSVVAALHSQQFTIEDDRRIIGMLKEGKGWADIGRALNKPPKGILNRYTTSLDPRLRRGPFTAEEDAAILAHVSELGVGKWAELAAKMGHTRSGTTLQKRYTNALRPEIKKGSWSEDERRRLLEGIVKHARDWTAVAGHVGTGRTPLYCRQYATRTFHFSNYNKTRHMYFTPDEDARICMAVERYGRTNWNKVAEDVPGRGWLSVMRRYVFIIPKWLRVRYSSNVRASLRALLRGDGDVESKLAAQFKDIDAAKGWVALELGMDDGSQVDWARVNGASGAERSAALDAVEKEILPRVTAEEWKEGATAVWVPAWRWERPICAGRKAPIAAVANHPCVHGFVAISAGGDH* # ORIGINAL: g2707.t1 original gene structure, not modified by PASA NODE_5807_length_710_cov_50.8504_potentialcontaminant AUGUSTUS gene 73 178 . - . ID=g2707;Name=g2707.t1 NODE_5807_length_710_cov_50.8504_potentialcontaminant AUGUSTUS mRNA 73 178 . - . ID=g2707.t1;Parent=g2707;Name=g2707.t1 NODE_5807_length_710_cov_50.8504_potentialcontaminant AUGUSTUS exon 73 178 . - . ID=g2707.t1.exon1;Parent=g2707.t1 NODE_5807_length_710_cov_50.8504_potentialcontaminant AUGUSTUS CDS 73 178 . - 0 ID=cds.g2707.t1;Parent=g2707.t1 #PROT g2707.t1 g2707 MENLPPEILHNIFDHVFVLPVDIAALNARRLNKIY # ORIGINAL: g3015.t1 original gene structure, not modified by PASA NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS gene 1 1221 . - . ID=g3015;Name=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS mRNA 1 1221 . - . ID=g3015.t1;Parent=g3015;Name=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS exon 950 1221 . - . ID=g3015.t1.exon1;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS CDS 950 1221 . - 0 ID=cds.g3015.t1;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS exon 678 730 . - . ID=g3015.t1.exon2;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS CDS 678 730 . - 1 ID=cds.g3015.t1;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS exon 228 469 . - . ID=g3015.t1.exon3;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS CDS 228 469 . - 2 ID=cds.g3015.t1;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS exon 1 102 . - . ID=g3015.t1.exon4;Parent=g3015.t1 NODE_4604_length_1414_cov_27.7102_potentialcontaminant AUGUSTUS CDS 1 102 . - 0 ID=cds.g3015.t1;Parent=g3015.t1 #PROT g3015.t1 g3015 MCITAIPPVDGGGGDTNTNTNTNTNTNTNTNTGTQSGNAGASAAGGGGTSMAPIIGGAVGGMAVVALVSFFVYKKMSAKKTPYKSKSDTWSTEEANSLQLFENPVAINTGSFNSTGQRMRQTRPTENALLASGGIADTRASLLVKGTVRSKAPRPASGYDEPVYSAPVRKNSDDETYAPLVAKGAGSGEVVYGNYNDVRGSEEVYSTPRPDDEYYAVPALKPR # ORIGINAL: g8120.t1 original gene structure, not modified by PASA NODE_3233_length_3946_cov_127.514 AUGUSTUS gene 2339 3406 . - . ID=g8120;Name=g8120.t1 NODE_3233_length_3946_cov_127.514 AUGUSTUS mRNA 2339 3406 . - . ID=g8120.t1;Parent=g8120;Name=g8120.t1 NODE_3233_length_3946_cov_127.514 AUGUSTUS exon 2339 3406 . - . ID=g8120.t1.exon1;Parent=g8120.t1 NODE_3233_length_3946_cov_127.514 AUGUSTUS CDS 2339 3406 . - 0 ID=cds.g8120.t1;Parent=g8120.t1 #PROT g8120.t1 g8120 MEARRTERAPECIFAPHFGHTAPITGRLGGNLWNGREVSEALRGHAQRLMATPELTLRRGEILKELHAALISTDAGFSLLKLTAFGSSVSGFGTVNSDIDVRAQLSPGYSNPPVRDTDLVHAIAKSLTRPRETPRFRVLFSLSGRLVRCVHLATGTSIDIVVGDDSVIDNTRLLAAYSAADYRVRVLYFAVRSWARWAGILGVQNGYLSSYSHALMCIAHLQAENVLPVIGAMRKNGTPILVKQATAVPTWPSHSKLLQTFFQRYLSLHQRDALSKVAVSVRLGGFVPVDRCTNLGDRPRLYERFIIEDPTKAEEGDVGRKIRGAKEQETILSAMRIALGDLHGAQRLPYLQSPK* # PASA_UPDATE: g3136.t1, single gene model update, valid-1, status:[pasa:asmbl_7524,status:12], valid-1 NODE_4680_length_1336_cov_23.9056_potentialcontaminant . gene 73 895 . + . ID=g3136;Name=g3136.t1 NODE_4680_length_1336_cov_23.9056_potentialcontaminant . mRNA 73 895 . + . ID=g3136.t1;Parent=g3136;Name=g3136.t1 NODE_4680_length_1336_cov_23.9056_potentialcontaminant . exon 73 281 . + . ID=g3136.t1.exon1;Parent=g3136.t1 NODE_4680_length_1336_cov_23.9056_potentialcontaminant . CDS 73 281 . + 0 ID=cds.g3136.t1;Parent=g3136.t1;5_prime_partial=true NODE_4680_length_1336_cov_23.9056_potentialcontaminant . exon 634 895 . + . ID=g3136.t1.exon2;Parent=g3136.t1 NODE_4680_length_1336_cov_23.9056_potentialcontaminant . CDS 634 895 . + 1 ID=cds.g3136.t1;Parent=g3136.t1 #PROT g3136.t1 g3136 REQEEYEREGIAWVHIDYFNNQVICDLIEVQHQGIISILDEECLRPGDPTDADFLRKLDERQGKHAHYMSRQTNKSEKTLQPNLEFRLKHYAGDVTYTVTDFIGKNKDTLFQDLKRLLFNSKNAVIKKMWPDGALDIKEVRGCLDTPSTTTNCIPA* # PASA_UPDATE: g9894.t1, single gene model update, valid-1, status:[pasa:asmbl_10126,status:12],[pasa:asmbl_10127,status:12],[pasa:asmbl_10128,status:12],[pasa:asmbl_10129,status:12], valid-1 NODE_959_length_15444_cov_39.6911 . gene 154 6128 . + . ID=g9894;Name=g9894.t1 NODE_959_length_15444_cov_39.6911 . mRNA 154 6128 . + . ID=g9894.t1;Parent=g9894;Name=g9894.t1 NODE_959_length_15444_cov_39.6911 . five_prime_UTR 154 328 . + . ID=g9894.t1.utr5p1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . five_prime_UTR 676 699 . + . ID=g9894.t1.utr5p2;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 154 328 . + . ID=g9894.t1.exon1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 676 749 . + . ID=g9894.t1.exon2;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 700 749 . + 0 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 1010 1695 . + . ID=g9894.t1.exon3;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 1010 1695 . + 1 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 2022 2195 . + . ID=g9894.t1.exon4;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 2022 2195 . + 2 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 2583 2680 . + . ID=g9894.t1.exon5;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 2583 2680 . + 2 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 2792 3068 . + . ID=g9894.t1.exon6;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 2792 3068 . + 0 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 3404 3520 . + . ID=g9894.t1.exon7;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 3404 3520 . + 2 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 3969 4085 . + . ID=g9894.t1.exon8;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 3969 4085 . + 2 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 4373 4476 . + . ID=g9894.t1.exon9;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 4373 4476 . + 2 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 4693 4811 . + . ID=g9894.t1.exon10;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 4693 4811 . + 0 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 4999 5208 . + . ID=g9894.t1.exon11;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 4999 5208 . + 1 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . exon 5384 6128 . + . ID=g9894.t1.exon12;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . CDS 5384 5600 . + 1 ID=cds.g9894.t1;Parent=g9894.t1 NODE_959_length_15444_cov_39.6911 . three_prime_UTR 5601 6128 . + . ID=g9894.t1.utr3p1;Parent=g9894.t1 #PROT g9894.t1 g9894 MAHHIGIGGGGYMPALWYGAMQPQQPQQTQQQQQQQQQQQQQQQQQQQQPGQPARKPPQQQQQQQQGGMPDLAPGSVRKTMAVIGPAKKTKMGGFGYKDGPDGDMMGGDEYDQSGAPVGSAPGLSGAGNGQSGQSGQSGQGQQFYFPPQSPSQQQHIGMYGTPSNAPSSIDLGGGSMQQGAMGGAMLGGGPRGMVPGMGGGPVPMYQNAPGMTTAAAVAAAQAQYNSRLQMQQQQQMPSAMGQHMGPSSVGRGVGGVAPGGLVGTNPNPNSNPNAAAAAAARGLPGAPRAMPTQPNPSMGMGRGPSVGAGLGGAQLGMGSQGLVQQQQSQQPQPQQPSVPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGQQQQPGQQGRAVGPAGMFGFGVRLGTGAGQGVMGLSNAGGGSYSPSNELFAMMTKGRDMQGIDMSDFPALGGRGTATITSNYNEDFPALPGSFKTGDQSDGSSGSMDTILGSMQAHVGQGQPLYGKSQGFPNGYSLSDGRTGFESVRKDSYSDQTPSQSKLEGSQSVESQSDRFGLLGLLNVIRMTEQDLNTLAIGSDLTSLGLNLNSPESLYTTFSSPWADTPSARPKDPEYCLPQCYYQINHVPAPTTKMTLLTEETLFYIFYAMPRDALQQAAAAELFQRDWRYHKELRLWFARVASVEPMKTPTHERGTYVYFDVASWQKVRKDFVIAYDQLEGGERSPFRTAGIVI* # ORIGINAL: g9896.t1 original gene structure, not modified by PASA NODE_959_length_15444_cov_39.6911 AUGUSTUS gene 10241 14969 . + . ID=g9896;Name=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS mRNA 10241 14969 . + . ID=g9896.t1;Parent=g9896;Name=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 10241 11365 . + . ID=g9896.t1.exon1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 10241 11365 . + 0 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 11492 11597 . + . ID=g9896.t1.exon2;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 11492 11597 . + 0 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 11797 12092 . + . ID=g9896.t1.exon3;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 11797 12092 . + 2 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 12341 12475 . + . ID=g9896.t1.exon4;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 12341 12475 . + 0 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 12710 12996 . + . ID=g9896.t1.exon5;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 12710 12996 . + 0 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 13234 13918 . + . ID=g9896.t1.exon6;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 13234 13918 . + 1 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 14045 14300 . + . ID=g9896.t1.exon7;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 14045 14300 . + 0 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 14423 14555 . + . ID=g9896.t1.exon8;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 14423 14555 . + 2 ID=cds.g9896.t1;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 14665 14969 . + . ID=g9896.t1.exon9;Parent=g9896.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 14665 14969 . + 1 ID=cds.g9896.t1;Parent=g9896.t1 #PROT g9896.t1 g9896 MVHVHAGGGIPPESRRASSSSASLSSASPASRAAASDGGDVSAPRELQVDGEVARSTDEQITAKKSSEDDSLDASGRKGILAIGAMNESNGGDATQIEAKIGRPARKSELFPVPSPQEDAAMEKNRPHVTSSAPTAEELKDHVAGRSLEVEAEFGKARSTHNAHLAEENGELEGMTSPIAERTSFGNAGGSDDMSDHSGSRGRESADIERRDNSGTTADAAVSNASENGPSLPSAWRDSGEWVVLTHDGYVPASPLSEASAAEWDGDQRQSTGDAATATAVDGLPKHHRTARTSMDVHRLSSFDFQSATELNSSDEEDHAQAISTVVFSAPLEEDEHVADGERATGDGVDDREHHVGVMGGVVVSVLSCVLVWMSGSTNSLSGLLNLAPEARASSGSSRDIGKGSGSRAMTVGASGVAFKSFLDWDGSGLLLIPDEPIKCTLTSIEKITFRHTKLTYSVYVITVTHGPFRWQLRRRVKNFIALHFQLTTARLKGEVNATVPVFPKAPEQSGRRLSFAPLRTHRKEMIEAYLGAIVSDAQFLTLLPVRKFFEISPMSFVSDIGRKLYEGPIDKRSGGRKAEFGCCRFIWRTWSAAWLVVKDSFLVYISPDQKRIKSVMLFDRNIDVTCGQDATGVRCGVCVSNNSRDLSIRCDNNTEMNEVRDSLKIALNACPWTAAHPNGSFAPVREAALCQFYLEGQSYFAAVADAIEGAREQIFIADWWLSPELHLRRPFADHPNSRLDRLLEQKASEGVRVYVIVYKEVEMALSINSMYTKMQLKKKNVTIVRNPDHSPDGVWLWAHHEKIVCVDQSVAFIGGLDLCYGRYDTCDHELTDIHAGMQPADAFTGTLLEGGLFRINLSRGSAFDSLFPDSKGAPIFEILFGGSVRWTSKGHDAADPSWDDSFVFDVGHDQEDAPLELRLYDEHAVEKGPIARATFEPTSMPLNRPHAVDLELVRTDSLQCTAERDDRKRVSSIRMDFVFSPPSQAEAAKAAESVKQHATWPGQDYSNPIVQDFNSIASPYQDSVDRRRVPRMPWHDIAVGVHGQAARDIARHFIERFNHVKVGKSKTDPSIPFLVPKADMPRPQRASNGDTPRIPATAIPLGLLPPYF # ORIGINAL: g9895.t1 original gene structure, not modified by PASA NODE_959_length_15444_cov_39.6911 AUGUSTUS gene 6530 9621 . - . ID=g9895;Name=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS mRNA 6530 9621 . - . ID=g9895.t1;Parent=g9895;Name=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 9535 9621 . - . ID=g9895.t1.exon1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 9535 9621 . - 0 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 9328 9414 . - . ID=g9895.t1.exon2;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 9328 9414 . - 0 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 8984 9063 . - . ID=g9895.t1.exon3;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 8984 9063 . - 0 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 8611 8728 . - . ID=g9895.t1.exon4;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 8611 8728 . - 1 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 8128 8186 . - . ID=g9895.t1.exon5;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 8128 8186 . - 0 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 7755 7784 . - . ID=g9895.t1.exon6;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 7755 7784 . - 1 ID=cds.g9895.t1;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS exon 6530 7004 . - . ID=g9895.t1.exon7;Parent=g9895.t1 NODE_959_length_15444_cov_39.6911 AUGUSTUS CDS 6530 7004 . - 1 ID=cds.g9895.t1;Parent=g9895.t1 #PROT g9895.t1 g9895 MEAMSRLLGGESSSASGSSSGGGKGFLSDIDEGITLSRTTRIYGFIGCFVGGFLLSILSVISFALGNIVLFAVLYTLGNVLSICSTGFLVGPVKQIKNMFKETRYIATIVMLICIGLTLWAALGLKNTLLVIIFCILEFLAMAWYCLSYIPFARLFRGGSCACGHERYDQRKAVQSDKWPRLHHDVLVEPSLVEEWKGLGAEAAKPVSKEDASETFEKMGTYKLLARASSAIPAIRSGPLINFRIFGRRYLPVKIFCGIEPSHFEIFRDDIVENMLALAVEERDDLMAAMSARQCKIEKIVETSAGDSPPV* # ORIGINAL: g12419.t1 original gene structure, not modified by PASA NODE_4837_length_1216_cov_29.3409 AUGUSTUS gene 218 1202 . + . ID=g12419;Name=g12419.t1 NODE_4837_length_1216_cov_29.3409 AUGUSTUS mRNA 218 1202 . + . ID=g12419.t1;Parent=g12419;Name=g12419.t1 NODE_4837_length_1216_cov_29.3409 AUGUSTUS exon 218 320 . + . ID=g12419.t1.exon1;Parent=g12419.t1 NODE_4837_length_1216_cov_29.3409 AUGUSTUS CDS 218 320 . + 0 ID=cds.g12419.t1;Parent=g12419.t1 NODE_4837_length_1216_cov_29.3409 AUGUSTUS exon 481 1202 . + . ID=g12419.t1.exon2;Parent=g12419.t1 NODE_4837_length_1216_cov_29.3409 AUGUSTUS CDS 481 1202 . + 2 ID=cds.g12419.t1;Parent=g12419.t1 #PROT g12419.t1 g12419 IHKVVIAGGQFKADALKPREVVSLLLDNDEMAANLRERESRAAESKQKRKRGAGKGDVPVVANGAGKTQHKPPPKRTADAKEDGQSGNKRKRRKQDLAPTSTSTVATAAETEDAALSAIASSVGTPLDVQDLAADGTPGAGAGTGGRGGRGAAGGAGGQRGRARMRGGPGSRGGRIAPVRAGRGSRGRGMARVTRGGLLVAGASARAPRADAQGGPTAAGAPFLGAASGVAQMQPAPAMGGAVGLRPQSVPALRLAGDSPAHVSPVATAVGEGL* # ORIGINAL: g10950.t1 original gene structure, not modified by PASA NODE_1120_length_13804_cov_44.1387 AUGUSTUS gene 4770 6650 . + . ID=g10950;Name=g10950.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS mRNA 4770 6650 . + . ID=g10950.t1;Parent=g10950;Name=g10950.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 4770 6650 . + . ID=g10950.t1.exon1;Parent=g10950.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 4770 6650 . + 0 ID=cds.g10950.t1;Parent=g10950.t1 #PROT g10950.t1 g10950 MRFSSRLVALALGIVLLLAVAVVFISVSVTELDAPPPANPSASGVRRFWNRLPVAAPAEKARHPCIRQGASVDDIGGEIRAKESEDGSPHSRAKFSRYFDRVYYVNYARDEGKRDVMRALLSNYGVEGERVELVDERDADIQKQWQNARRQIDITFGENANKPGVMSTISDYILLRTMSRLLDGALRRQYRRILVLSDTVRFISDFDAHFERIARAVPADWKLLHLGLQQHSWSASAAGIPSDPRLQGMLYHPLSAFDGAFAVGIDMSVFDILQFEIMKATRAFALGPLRAVSVLYPRYVYAALPNLVVDDVLAMSLIRTNKAKLAQFRWDLTQYETLPPPAPLPRVCVVMTMHNAESTVEHSVRSLIAQTYSKIDIIAVDDASTDNTYNVLRRLSEEDRRVVLIRNERNLGPYTSRNVGLKSCTGDAYMNLDADDLSAPDRVATQLQPLIDNRAEITTSLYIRTHAKPEELQGTWDEVWPRVQAARIHARSDSTYAFCCSENLALGTVMIKMSVFEKLGAGWRDFRFGGDGEFLERYLAVVLRLFFWSSTMNIYRFLAKTPPLPPYYERIGRALYIAADRNSSLSHAIPIGGEERLSQRRHYQGALLEEAGLSADTLTAADVYDD* # ORIGINAL: g10952.t1 original gene structure, not modified by PASA NODE_1120_length_13804_cov_44.1387 AUGUSTUS gene 11042 12014 . + . ID=g10952;Name=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS mRNA 11042 12014 . + . ID=g10952.t1;Parent=g10952;Name=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 11042 11122 . + . ID=g10952.t1.exon1;Parent=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 11042 11122 . + 0 ID=cds.g10952.t1;Parent=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 11233 11335 . + . ID=g10952.t1.exon2;Parent=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 11233 11335 . + 0 ID=cds.g10952.t1;Parent=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 11539 12014 . + . ID=g10952.t1.exon3;Parent=g10952.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 11539 12014 . + 2 ID=cds.g10952.t1;Parent=g10952.t1 #PROT g10952.t1 g10952 MNGKVKAVVFDCGNILSPDVNYNGLYELVSPDELPAVKATIKKEWAKMRVSADYTEEMFWNEILKVANIARPGVTWTDLDATVLGTFCVYWSILAIVERLKQRGYVVGVISNYNKAWFEHIFDSFGLRTLFTEATLVLPSFEAQTAKPSRDIYESFGRRLVDAHPHLSLSNCAFVDDKPANVDAAVAVGMHGILFHAGKERPSALVDALAKLGVDAREA* # ORIGINAL: g10951.t1 original gene structure, not modified by PASA NODE_1120_length_13804_cov_44.1387 AUGUSTUS gene 7071 10697 . - . ID=g10951;Name=g10951.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS mRNA 7071 10697 . - . ID=g10951.t1;Parent=g10951;Name=g10951.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 7071 10697 . - . ID=g10951.t1.exon1;Parent=g10951.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 7071 10697 . - 0 ID=cds.g10951.t1;Parent=g10951.t1 #PROT g10951.t1 g10951 MALMFEPTKLRRIFLWVALFSLLFIFGLAGRVFLNQPRWPQFISPHDNHATTGAEIVEIVSDRADPEAPTSTDPGSNRNNNVDGIVRRCSCPAEAELDEIIASTDIPGEVILHREVGEPGWMASWNATNASVFEDGRIFSWPAVARGSIHGAIPLSSESVNDASVVIIIPVLDDSFYQIRLATDCLDIHPGASLAVESADGRATQFSPLRMDSTFPHHCRRGICRIVFRSPLGCKSVGIRLARIPRPSQCHIFHVDVVHLGRSRSFSPPPHLRPLGSSVLVIATRPQRIERVEDAINSAYPFVDAVSVMLNNYEGVQIPSFLLNDPKIHLGNSSVFGDRGPAGRFFHTNHVHKWRSTRGPGVDNSDGRRNLSDSPDVKSGNRTRRSTARDYDYTVTLDDDISLPADFAARLTRRLRCYGNAVVLGCHCCLVSQPMDSRGYYTPGSRRCRTMVERVGEDHSVHFIGSGIVVFHTSTFGASYDDFFYKAGTDVTFSLYAHDRGIPLMCAARPENWVISWPVVDRTLVKSSVYESMVSGEISSAIVKNNLTLHPSKIVDNMVRAAWPISVGGGATCGGVRRRKFVLGVLSTASVVSVQRCLESFAATRSSGFDWVVIIADDGASTDMSSLAFNIYRRMPSFGDEVHVINTSGLGTAAQSNAILEMSMEIRFDYGVIVHGDAYFGGVGWDVVVARAVNVHPLLEIILETDSPATLKAPTTNSEGASPEAGWNRNGRRDDTALPVVVRVRRGSTESRDADMYSETLLWSFTPHLIDRIGYVRENAYGWTTHGSTTTEAEPRRTARPAWMQAYAWRACVVFALPSRLATMTSNGIDIDCRLDALSPSGAIGLVLRSTSSGTTVVLPRLPAVTVLQPLSPNDTRTSELLLNPPECACLSTSVANAKIVAALAQSEAQREPEIVIPDHREALPRSLVAAHKGRRAGLPAFDAIYVLQWGAWPGSDEHIDNNYDDHEGSSSYQTDVGLLFPELVPLSRRIFGIARANNSETNSAWRAYFNASLSIPAGTRVIENECEFHLDYDNNAARAHFVERKHRWNGTRAIPSHAEYTTAAAFLNIVKNALLSEFDRILVLDADDVRFSQESIAGLVTWLESAMWDLPTKWKLVRLGTRQRCWGEGYAAPYSNNFFHPRWGGHGSFPVAVDHAVYGLLIDQLSEMALPLDVGPLHEVARRYPSLSFAAHPGLGWPQAPPSADFM* # ORIGINAL: g10953.t1 original gene structure, not modified by PASA NODE_1120_length_13804_cov_44.1387 AUGUSTUS gene 12543 13646 . - . ID=g10953;Name=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS mRNA 12543 13646 . - . ID=g10953.t1;Parent=g10953;Name=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 13511 13646 . - . ID=g10953.t1.exon1;Parent=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 13511 13646 . - 2 ID=cds.g10953.t1;Parent=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 13210 13383 . - . ID=g10953.t1.exon2;Parent=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 13210 13383 . - 1 ID=cds.g10953.t1;Parent=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 12543 13005 . - . ID=g10953.t1.exon3;Parent=g10953.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 12543 13005 . - 1 ID=cds.g10953.t1;Parent=g10953.t1 #PROT g10953.t1 g10953 SGVPWPWDGAITFEDVQLRYRDGLPLVLKGLSFCIRSKEKIGIVGRTGSGKSTLALALFRLIELSAGRIVIDGVDIKTLGLRDLRSRLSIIPQDPVLFVGTVRYNLDPFGHHSDESLWNALSRAHLADQIRSLEGSLDAPVVENGENFSVGERQLLCLARALLRNCRILVLDEATAAIDTQTDSLVQRTIRESFVDCTLLTIAHRLNTILDSDRVLVLKDGRCVEFDTPANLLADSQSALALMVARAELSGGAVPS* # ORIGINAL: g10949.t1 original gene structure, not modified by PASA NODE_1120_length_13804_cov_44.1387 AUGUSTUS gene 185 3930 . + . ID=g10949;Name=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS mRNA 185 3930 . + . ID=g10949.t1;Parent=g10949;Name=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 185 349 . + . ID=g10949.t1.exon1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 185 349 . + 2 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 635 765 . + . ID=g10949.t1.exon2;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 635 765 . + 2 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 948 1023 . + . ID=g10949.t1.exon3;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 948 1023 . + 0 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 1305 1371 . + . ID=g10949.t1.exon4;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 1305 1371 . + 2 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 1776 1889 . + . ID=g10949.t1.exon5;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 1776 1889 . + 1 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 2285 2369 . + . ID=g10949.t1.exon6;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 2285 2369 . + 1 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 2703 2932 . + . ID=g10949.t1.exon7;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 2703 2932 . + 0 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 3225 3336 . + . ID=g10949.t1.exon8;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 3225 3336 . + 1 ID=cds.g10949.t1;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS exon 3550 3930 . + . ID=g10949.t1.exon9;Parent=g10949.t1 NODE_1120_length_13804_cov_44.1387 AUGUSTUS CDS 3550 3930 . + 0 ID=cds.g10949.t1;Parent=g10949.t1 #PROT g10949.t1 g10949 EFATPTQSQFHHYKDFWRLDTADYTWTKLELKGIPSARSGHRMVVWKHKLLLFGGFVDNNQQIKYFNDLHIFDFDEHAWTSPKFTERDQLPSPRSGFQLASFEDYVYLIGGYSKKGDVGTIHSDVWRIHVPTLKWEKVKKQGVPPNPPRAGFALAIHKKRAIVFGGVHDEDKDDSLVSTFFADVHGFRFDTGRWHSITLRPQKSAAKTDAEKAAGAPEATISDAENSDLDGDDDTDRTAPAAPAHVPTPASGSCVAPSAVADEISTAASNGPSRRRNAQIVVRGNTLILYGGVVEIAEKEVTLDDMWTLDLNKLDGFACVRESSSVQWLGEEDDDDDDDDDGDDEGDDDSENSDEEENSDGDSEAEASGGEDSGDEADEGEKKHTKTPAEAPATGAIGATVRNPKGGESLREYFSATQDHWMGAAERAGAADGKERRRVAFELAQKHFDGAK* # PASA_UPDATE: g5721.t1, single gene model update, valid-1, status:[pasa:asmbl_678,status:12],[pasa:asmbl_683,status:12], valid-1 NODE_1182_length_13335_cov_52.0964 . gene 8230 12987 . - . ID=g5721;Name=g5721.t1 NODE_1182_length_13335_cov_52.0964 . mRNA 8230 12987 . - . ID=g5721.t1;Parent=g5721;Name=g5721.t1 NODE_1182_length_13335_cov_52.0964 . five_prime_UTR 12979 12987 . - . ID=g5721.t1.utr5p1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 12871 12987 . - . ID=g5721.t1.exon1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 12871 12978 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 12325 12432 . - . ID=g5721.t1.exon2;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 12325 12432 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 11784 11924 . - . ID=g5721.t1.exon3;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 11784 11924 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 11179 11565 . - . ID=g5721.t1.exon4;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 11179 11565 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 10778 10893 . - . ID=g5721.t1.exon5;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 10778 10893 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 9357 10443 . - . ID=g5721.t1.exon6;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 9357 10443 . - 1 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 9013 9150 . - . ID=g5721.t1.exon7;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 9013 9150 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . exon 8230 8790 . - . ID=g5721.t1.exon8;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . CDS 8386 8790 . - 0 ID=cds.g5721.t1;Parent=g5721.t1 NODE_1182_length_13335_cov_52.0964 . three_prime_UTR 8230 8385 . - . ID=g5721.t1.utr3p1;Parent=g5721.t1 #PROT g5721.t1 g5721 MARRCKEAEVARDAAVQLGRKKSVFLSSALHEIRQPLNAIIGMTSLLQETMQTTIQAEYTQICNSASQALLRMVNSMLDMKKIEAGRLDVERADFELVPFLETLLDIVCYRADLKNIDLYWEIDADVPRHFISDEERLRQILVNLLSNAVKFTESGSVHIRVSVAEAEHHCGERNEFCRQTSREGSFMGDIESADQEHGPAAPPTTSRPARGSIGGASGLMMLRFDVIDTGIGIPEDQIASLGDAFFQVKEPVTRPKAFGSEGSGLGLSISKKLAALLHGSIAFTSRFGEGSTFSLFAGIERTPDQLQPMAPAQSDGTSTPTDVSALKKKSSFVTSQSISTTPGGRDGRDGRTGSDETHSMLDFTASREPSLVGAGTALSSRLVDHPRSVGSRGPAAEPPRPVVADPAAQFKGVHICAIGANVQVLKALCYFADIHGLLLVECANEQDAVDWMSAQTFLASPVACLLEDHGRFGAAPCRYYPAIFVIEETNPGIRHLKACVGATGMWIPVIATARLTSRHDEYAATGKLGSAMADFAVLGNSSSSCVSGGLAIVAGSGGDSAVGGVADATLLRPLKQASLLSCLVQLLHQSPLILSSSSISVAEESTAYSSTNGELCLEGIAQECAQLESVATSAAGEEPTKRVLPRLLVVDDSAVNRMIAERMLESLGLPCDLAEDGPDAVEAAENVDYDLIFMDCQLPTYNGFEATTRIRALSAAARGPVTGTTTPHESGAAGSAGEAVHPGVHPGVHPGVHHRRRPVIIAMTGDSSDDIRIRFIEAGVDGWLPKPYTKDLLIQCLAEHLHPAHLPSVMSVTSSDRRRLLPSASGKA* # PASA_UPDATE: g5719.t1, single gene model update, valid-1, status:[pasa:asmbl_679,status:12], valid-1 NODE_1182_length_13335_cov_52.0964 . gene 467 1411 . + . ID=g5719;Name=g5719.t1 NODE_1182_length_13335_cov_52.0964 . mRNA 467 1411 . + . ID=g5719.t1;Parent=g5719;Name=g5719.t1 NODE_1182_length_13335_cov_52.0964 . exon 467 715 . + . ID=g5719.t1.exon1;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . CDS 467 715 . + 0 ID=cds.g5719.t1;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . exon 922 1003 . + . ID=g5719.t1.exon2;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . CDS 922 1003 . + 0 ID=cds.g5719.t1;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . exon 1197 1411 . + . ID=g5719.t1.exon3;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . CDS 1197 1360 . + 2 ID=cds.g5719.t1;Parent=g5719.t1 NODE_1182_length_13335_cov_52.0964 . three_prime_UTR 1361 1411 . + . ID=g5719.t1.utr3p1;Parent=g5719.t1 #PROT g5719.t1 g5719 MDESFAPLVSLLVAFAMNKFAEYGGRADDAIPYLIQRRDARGTDSESSTETGGSAEVPRGRRPNDDAEGEGSSDGDNVVKRRRIDSTVSLADAIMTASENAGVQASPNRFDVERSLAGSELSRQYDAEVERSVRARLESSTEHVDPTQHPNVASWLMNNQQRHS* # ORIGINAL: g5720.t1 original gene structure, not modified by PASA NODE_1182_length_13335_cov_52.0964 AUGUSTUS gene 2267 7681 . + . ID=g5720;Name=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS mRNA 2267 7681 . + . ID=g5720.t1;Parent=g5720;Name=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 2267 2410 . + . ID=g5720.t1.exon1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 2267 2410 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 2665 2707 . + . ID=g5720.t1.exon2;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 2665 2707 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 2870 3006 . + . ID=g5720.t1.exon3;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 2870 3006 . + 2 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 3197 3283 . + . ID=g5720.t1.exon4;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 3197 3283 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 3475 3736 . + . ID=g5720.t1.exon5;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 3475 3736 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 3912 3967 . + . ID=g5720.t1.exon6;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 3912 3967 . + 2 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 4509 4640 . + . ID=g5720.t1.exon7;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 4509 4640 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 4897 5055 . + . ID=g5720.t1.exon8;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 4897 5055 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 5432 5623 . + . ID=g5720.t1.exon9;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 5432 5623 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 5787 6273 . + . ID=g5720.t1.exon10;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 5787 6273 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 6536 6688 . + . ID=g5720.t1.exon11;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 6536 6688 . + 2 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 6849 7012 . + . ID=g5720.t1.exon12;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 6849 7012 . + 2 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 7268 7437 . + . ID=g5720.t1.exon13;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 7268 7437 . + 0 ID=cds.g5720.t1;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS exon 7615 7681 . + . ID=g5720.t1.exon14;Parent=g5720.t1 NODE_1182_length_13335_cov_52.0964 AUGUSTUS CDS 7615 7681 . + 1 ID=cds.g5720.t1;Parent=g5720.t1 #PROT g5720.t1 g5720 MVGCVRVVPGCSGCRLGLVHRLWAIYRVLGLAAVLCNLSAFASAVDFGDARMVMHRENELNLGLSVRALATQSHESNNSATDDALPLVVQCLGCCVGWSVDGSDKCEHLSQIFEHAQSRVLPTADGRFEASFTILSLILENFFGECRFAAASALGFEEGASRNGIEWRGPNATTMVRGGATTANATVVFEIVRASLTEGVNARAIVVRGIESDEPTLKNGLRGRRADAVCVDNLATKTCCYDTTFDVTKGVCAPVDCAVKYSSSMVPRTFYNKTSRICEPVALCLFKTGSTIVYDPTLNVCKPVRIDRANPLDTTPIDLIPDFQWKDKTQDNSTGSGGSSLNCHNGQRVVRNGVVSCDCDPGWFTSAKQSVLSFEYCTAKSSAGDIIVSEGGDNANKTYKLFIIGVSVSSTVIGAACMGCIARKCLVRRRKRRAKKLLAQGANGDATDASAVVVKAPKSGRSSTQSFALVDYANGTNRSSDESSTYRRAASRSSGLLALAESDEEQDCGDALQRTVMTPPSVAPPPLPPANVYSQPIQSRKSPAPNAQAAPPVIWQPPSHYKRIGDASRDAVYYDRARLKARSSSGSQSQAPDAADDRVNGNAPVWKPPSHYRRLGREEREQEYMARKLAARLRRATVLYTFEATEFNANEISVNEGDTVTDVEVFDDGWAQVRNTNGQMGIVPSSYIQLLPRSGGVQPGGGAGGVGDPAGRASPITTQPRGMRSEEPQYVDRKQLDELTKGSNLLSLLA* # PASA_UPDATE: g6575.t1, single gene model update, valid-1, status:[pasa:asmbl_4024,status:12], valid-1 NODE_2314_length_6755_cov_41.6095 . gene 198 3104 . + . ID=g6575;Name=g6575.t1 NODE_2314_length_6755_cov_41.6095 . mRNA 198 3104 . + . ID=g6575.t1;Parent=g6575;Name=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 198 315 . + . ID=g6575.t1.exon1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 198 315 . + 0 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 456 671 . + . ID=g6575.t1.exon2;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 456 671 . + 2 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 1018 1119 . + . ID=g6575.t1.exon3;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 1018 1119 . + 2 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 1335 1539 . + . ID=g6575.t1.exon4;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 1335 1539 . + 2 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 1748 1841 . + . ID=g6575.t1.exon5;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 1748 1841 . + 1 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 2299 2449 . + . ID=g6575.t1.exon6;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 2299 2449 . + 0 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . exon 2667 3104 . + . ID=g6575.t1.exon7;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . CDS 2667 3052 . + 2 ID=cds.g6575.t1;Parent=g6575.t1 NODE_2314_length_6755_cov_41.6095 . three_prime_UTR 3053 3104 . + . ID=g6575.t1.utr3p1;Parent=g6575.t1 #PROT g6575.t1 g6575 MASGFKKKGASSRPQLPPSTKPSVHNGQLLVSTGVKSVDEVLGGGIAVGTVVLVEEDAHGAYARYLLRYFAAEGVVGKHEVLVATADESPDDFVEKLPGIDVRSEQQKSEEEMQEAAKGSSGGKEELKIAWRYKDLPSAQSIGRSDTPSSLDFCRPFDLTKKLDLSAESSARIHRINCSTTHCEMTTDGGGGDESTSYGRVMSRLRELVDSKFGSSAPVTGTRNVLRIAVQAAGSPFWDSDDEGECVRFLCALRGICRSSYAVAMVTCPVGVMDDRRLQHMRHASDTVIGLFAFQGTAHETDPAFRDHHGFFRLLKVPRLNSLWSVHPDPDLAFKLRRRSLVLERLHMRPEPETTAQRTGGSAHHSSSSASTTASPLPHAHAHAHAHAHTHTRSGTVAYDNTGGAGSVACQPGPPGKATPLDF* # PASA_UPDATE: g6576.t1, single gene model update, valid-1, status:[pasa:asmbl_4026,status:12], valid-1 NODE_2314_length_6755_cov_41.6095 . gene 3467 5016 . + . ID=g6576;Name=g6576.t1 NODE_2314_length_6755_cov_41.6095 . mRNA 3467 5016 . + . ID=g6576.t1;Parent=g6576;Name=g6576.t1 NODE_2314_length_6755_cov_41.6095 . exon 3467 3496 . + . ID=g6576.t1.exon1;Parent=g6576.t1 NODE_2314_length_6755_cov_41.6095 . CDS 3467 3496 . + 0 ID=cds.g6576.t1;Parent=g6576.t1 NODE_2314_length_6755_cov_41.6095 . exon 3778 5016 . + . ID=g6576.t1.exon2;Parent=g6576.t1 NODE_2314_length_6755_cov_41.6095 . CDS 3778 5016 . + 0 ID=cds.g6576.t1;Parent=g6576.t1 #PROT g6576.t1 g6576 MAAKMLVPARHTPEDAHSHAERRAAAFKHRGSNANCDIPIQDADLLGPDAIFAANVLIRVLAAREDPQHLRAATDADYAVYFMVVFRMPELPEGINPALLSKFRRVENVALAMGICPSTAASSMENSSNHGVEFPCMNSSGWVCAGWAGLASGDDTDHLYVSGNVAARTADRMKSEITKRLRRAVFERGSTSTTSTHTHGTAITKTNASTSIPPTLRENFTLYEIAAILNSAERPVVYYGAGLSCQLGMRTGVEQDAVYGYIPDVLVDRFVTRVLEEDASVFKEYLEASRNMLSFDRTRRSEGHLALAEIASAIGAPLVTTNTDLVMHGCGYLPTNLNDEVVIVPEDTDVLLCVGVGVDHHGLIRRARDAKPRDRRRDRVCVISINHLATPYLADGDILCAVRDSHAALVQVREHLIRMKCE* # ORIGINAL: g6782.t1 original gene structure, not modified by PASA NODE_2619_length_5646_cov_38.7647 AUGUSTUS gene 329 5525 . + . ID=g6782;Name=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS mRNA 329 5525 . + . ID=g6782.t1;Parent=g6782;Name=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 329 540 . + . ID=g6782.t1.exon1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 329 540 . + 2 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 770 1058 . + . ID=g6782.t1.exon2;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 770 1058 . + 0 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 1235 2051 . + . ID=g6782.t1.exon3;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 1235 2051 . + 2 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 2271 2492 . + . ID=g6782.t1.exon4;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 2271 2492 . + 1 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 2709 2760 . + . ID=g6782.t1.exon5;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 2709 2760 . + 1 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 3094 3961 . + . ID=g6782.t1.exon6;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 3094 3961 . + 0 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 4237 4453 . + . ID=g6782.t1.exon7;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 4237 4453 . + 2 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 4806 4913 . + . ID=g6782.t1.exon8;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 4806 4913 . + 1 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 5165 5287 . + . ID=g6782.t1.exon9;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 5165 5287 . + 1 ID=cds.g6782.t1;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS exon 5453 5525 . + . ID=g6782.t1.exon10;Parent=g6782.t1 NODE_2619_length_5646_cov_38.7647 AUGUSTUS CDS 5453 5525 . + 1 ID=cds.g6782.t1;Parent=g6782.t1 #PROT g6782.t1 g6782 SPPTGGGAGRAVRLDGIDDYVDLGVLATVTDTFTIELNVMPCDNITTDQQTFMTKADPTGTSLIEISFYQGTTALLWATGSWQMFDKSGAAQHIAITVQRTGPSTSRMFAYRDGVLRAEVNTTTAVLAVAAQSDPKRGDSPWIIGARTRRVRQGSARERFMCGYFDEIRIWSSVRTAAQIAATYRTVLTDSELLGAEYNTLQGYWSFDEATGALSVDRGSQGNNALLGGGLLDETPTRVPSPFGCVGALDNLYRGRLNADAAMRASTYLLDCVRLDGTADSSCAFSIVVDEIPSVGTLYTSVGGARGAAITAGMEVAVSGFVDGAWRANLLYQPPQGLFGAPLAYFRYRAAVRISGGAPTFSIQTYNSSINIDDNTIPLAGTSNAVKCDGVAQYGSLLGANDIGNNFTIEAWIKADSVREGQTFVSKHTAEGRNIVIFGYYEQGLHVNLRDTSNTVNMPMLTKPFHFAAVFTNIGPTTTLIATYLNGAQIYSRTQEKVLGNLTGTAPWSLCQEYDFGPVPSDYFGGTLDEIRIWNVSRTVAEIRSSMYIRYASPLPSNLAVYLPFDQLSGLSTPNMGNRGGAVTFTPSISLVGSPFSVPGGPVELRMKENTTVAFRLAAFDGDSDTLSAVVVNASTLGTVLVTGSGTPLGAGSSIPSPMAVTYQAPVSVGVGGIKDSFTYNVKDYASTSNSSGLVQVTILKTGPAIKSLLVETSAGSGTSFTATIVFEEDTNMPSAATQADVDALLTFTPPLSAAGYGGRWVNARTLVLSVASAASGASSVTALAGVLRVRVKGDRLKDVTGTSFASDTTSPVALLRISVVASSSSSKSVVPIVVPIVVVSAVLAACAFVYVRIHRNRLHGSLHRVIDYTELVDAVEIAHGSFGSVSKATFRGTLVAVKSIRTRTEEDVEEENGSDLSSLDVVSTMKKNFRNAGSRIKRSNRKRSGSQKEQQAMREMMNDFRREIDLMCNLRHPNIVLYMGSVEEPMLCIVQE # ORIGINAL: g12000.t1 original gene structure, not modified by PASA NODE_1603_length_10221_cov_43.2311 AUGUSTUS gene 2957 4751 . - . ID=g12000;Name=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS mRNA 2957 4751 . - . ID=g12000.t1;Parent=g12000;Name=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 4677 4751 . - . ID=g12000.t1.exon1;Parent=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 4677 4751 . - 0 ID=cds.g12000.t1;Parent=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 4354 4464 . - . ID=g12000.t1.exon2;Parent=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 4354 4464 . - 0 ID=cds.g12000.t1;Parent=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 2957 4156 . - . ID=g12000.t1.exon3;Parent=g12000.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 2957 4156 . - 0 ID=cds.g12000.t1;Parent=g12000.t1 #PROT g12000.t1 g12000 MDLTLYEILGVEGDATQAQLKQAFKELAIKFHPDKNPGNLLVEERFKAIASAYATLSDKKRRFYYDLYGKAALDGGPNGSCAQSPLETSQAREVFRSLFTETEIAEGAAGAKPAHADACTLVPNVLTDGGNYGQSNTVANANFGAAAEMKNIKHHIPNVGEKRSLDDPLYPPRQLRMGVDAADGYKRASCWAPAPTMLAHDQVQLPTPEASKPVEKSCTVKEYEVTVEELYARVVKMFRVTKGGVKTSSDQPATKHFLRVSLRPWWRDGHTIQHDSGDIIIKFVMRVAKHRHFELRGNDLVCPVRITLADAVVGVEAHIPTVEGTIVKIRKTGVIAPGMTYVVAGEGMPAPPANGPDSVGGPRESSSENTPAVALEAGGAAGLTQGAASSAPAAVPVPPLSRSRAWGEDASPAVAGDGPGARGDLVVVFDVVFPEKLLLDDDDSKRMLHDALSGRIRTLCQ* # PASA_UPDATE: g12001.t1, single gene model update, valid-1, status:[pasa:asmbl_2118,status:12], valid-1 NODE_1603_length_10221_cov_43.2311 . gene 5956 6768 . - . ID=g12001;Name=g12001.t1 NODE_1603_length_10221_cov_43.2311 . mRNA 5956 6768 . - . ID=g12001.t1;Parent=g12001;Name=g12001.t1 NODE_1603_length_10221_cov_43.2311 . five_prime_UTR 6693 6768 . - . ID=g12001.t1.utr5p1;Parent=g12001.t1 NODE_1603_length_10221_cov_43.2311 . exon 5956 6768 . - . ID=g12001.t1.exon1;Parent=g12001.t1 NODE_1603_length_10221_cov_43.2311 . CDS 6147 6692 . - 0 ID=cds.g12001.t1;Parent=g12001.t1 NODE_1603_length_10221_cov_43.2311 . three_prime_UTR 5956 6146 . - . ID=g12001.t1.utr3p1;Parent=g12001.t1 #PROT g12001.t1 g12001 MILFLVMLVARIFRRSAHKKNVARNNAQQMESLKARVAEVTALVEGIRANYNGSESLMPQPIRADLRRINALLGQCNEFIATCESPENRNSVGHSRHQGATCAKFEKRITDSMAKLSATCLSCASQQLSGGRMQAGPPAHAAVTPGGAQQTSLNDVKLPFADAPPGYDESQAMQHYGSVRR* # PASA_UPDATE: g12002.t1, single gene model update, valid-1, status:[pasa:asmbl_2119,status:12], valid-1 NODE_1603_length_10221_cov_43.2311 . gene 7437 10193 . + . ID=g12002;Name=g12002.t1 NODE_1603_length_10221_cov_43.2311 . mRNA 7437 10193 . + . ID=g12002.t1;Parent=g12002;Name=g12002.t1 NODE_1603_length_10221_cov_43.2311 . exon 7437 8573 . + . ID=g12002.t1.exon1;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . CDS 7437 8573 . + 0 ID=cds.g12002.t1;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . exon 8684 8877 . + . ID=g12002.t1.exon2;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . CDS 8684 8877 . + 0 ID=cds.g12002.t1;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . exon 9313 10193 . + . ID=g12002.t1.exon3;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . CDS 9313 10123 . + 1 ID=cds.g12002.t1;Parent=g12002.t1 NODE_1603_length_10221_cov_43.2311 . three_prime_UTR 10124 10193 . + . ID=g12002.t1.utr3p1;Parent=g12002.t1 #PROT g12002.t1 g12002 MSTKASSRNELCEKLARDRRLSLRIVQSVGTILGILYVVANVKTVQFQRSTNDLTFQIPAAESGVTVGAVVATDPNAVSHAAPQLKVSSMAANAEATSLLNATYIDECRARPAYCDGLLFAPTSDAHVDSSAVNVQPARAEQLRLPSLVPVALTTAPDRPQPAKILRCPHAPGDLCWRATWDYCKSSPTCLFDEFQTNASSSTFFGVGSASSSAGLSISEPSTLASVAMVSSGDVVHVGIQAQDDRGQRRTCGGDSFHIELRGPSIYVGHAIDNLNGTYSFYAVLYDVGVYEVRARLDYRACEGMTRCLGNRTTIAIEWVGEPVEDSHLGLQPAQGESTVQTLLLPKPVPATITVVDETTTCIPSQAADCLHQLRKSPAYSPCSNACTVAVWRCARNASRARSACVAPSNRCTRNMSYLRANGLLWEPTDANRPLLPFECLQNNTLTAEMARRPEASLASMGRSPSTIHTAPYKDVDNPETSHSGAPPAGPARSTTTGEGPSKLRTEKARDVQRRNEGRTASRRKSDSRRQHRRPIRRESSEPFILPDGLISSPEFLHPLRPGLAPTHVIVNAGLHHIADTVHLDLAYGAYVAALLRDVIAWFPRNGTHVIWRSTAQTQWPDRLLPSQHLCRTTYRVTYANEVAARAIASLRDELGQPLAIPILDYFQVSLGRADSAPDNRHYNDNVQIVVIDELLHMLCGAHARPASSVACG* # ORIGINAL: g11999.t1 original gene structure, not modified by PASA NODE_1603_length_10221_cov_43.2311 AUGUSTUS gene 1356 2485 . + . ID=g11999;Name=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS mRNA 1356 2485 . + . ID=g11999.t1;Parent=g11999;Name=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 1356 1488 . + . ID=g11999.t1.exon1;Parent=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 1356 1488 . + 0 ID=cds.g11999.t1;Parent=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 1918 2038 . + . ID=g11999.t1.exon2;Parent=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 1918 2038 . + 2 ID=cds.g11999.t1;Parent=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS exon 2326 2485 . + . ID=g11999.t1.exon3;Parent=g11999.t1 NODE_1603_length_10221_cov_43.2311 AUGUSTUS CDS 2326 2485 . + 1 ID=cds.g11999.t1;Parent=g11999.t1 #PROT g11999.t1 g11999 MLLCADFPSSIVEASVQIASSVSATESLPIVNLMKTFQLAFYYKEFVHASISLIEQCNALKDEGRRPSELVYKALRKLAKRSTYPCPPTSSLRTVLRGDATTEEDSDVSTDTVDPYKILQALSDDAGVQFLFREPKQ* # PASA_UPDATE: g3772.t1, single gene model update, valid-1, status:[pasa:asmbl_2185,status:12], valid-1 NODE_1625_length_10141_cov_40.4335 . gene 165 5137 . - . ID=g3772;Name=g3772.t1 NODE_1625_length_10141_cov_40.4335 . mRNA 165 5137 . - . ID=g3772.t1;Parent=g3772;Name=g3772.t1 NODE_1625_length_10141_cov_40.4335 . five_prime_UTR 4996 5137 . - . ID=g3772.t1.utr5p1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 4943 5137 . - . ID=g3772.t1.exon1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 4943 4995 . - 0 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 4666 4761 . - . ID=g3772.t1.exon2;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 4666 4761 . - 1 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 4283 4387 . - . ID=g3772.t1.exon3;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 4283 4387 . - 1 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 3882 4116 . - . ID=g3772.t1.exon4;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 3882 4116 . - 1 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 3461 3626 . - . ID=g3772.t1.exon5;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 3461 3626 . - 0 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 2884 3068 . - . ID=g3772.t1.exon6;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 2884 3068 . - 2 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 2278 2523 . - . ID=g3772.t1.exon7;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 2278 2523 . - 0 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 1509 2036 . - . ID=g3772.t1.exon8;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 1509 2036 . - 0 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 871 952 . - . ID=g3772.t1.exon9;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 871 952 . - 0 ID=cds.g3772.t1;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . exon 165 505 . - . ID=g3772.t1.exon10;Parent=g3772.t1 NODE_1625_length_10141_cov_40.4335 . CDS 165 505 . - 2 ID=cds.g3772.t1;Parent=g3772.t1 #PROT g3772.t1 g3772 MADDSGQGDVSLSIEETNALRIKLGLKPLDIGGGASSSGGASASKESEEKFVDLKQQASDAARKKAAEKEKEEKEKKRLNDKYKRTRTLADDGDDDIDDASAWVERTRRIDSERKLAAKRAQMFDEVENDFGIGDIMASAFAKGGKTGQKKTKYDTRDLAGLKVGHKLTEITESGQPVILTLRDSHVLGKDGEEEEDVLESIQIAEKERVDKNTDRRKGGPAYKAYDDDEFGDVSKKTLLSQYDEVIEGEKEHSFVIGRASTRAQLARDDQDKQTDADRVKLSLADIPIPKIASDYYTAEEMVSFKKSAGKKEKKRKTRKRTTADDLLPLDSNGNMNAGDGDASEIGPMDVDGVAKPAPINEAEIYGGGDEDEGLAELHAALQRTRRLKSRRQQAASLEAGGDVDGASSGVTATSSVARIAMETAVRRKQADKQESDGGITSDRQHSDNGGLIFSAMDEFVRTLGEAPTDGDMGDGIDVEMEGVAAVVHKDKSEAADDDEDGKMELDAVEEDARGGWRQVSAKGDDKSERSLDPSEGREKEIAFIEDEPLVATGLAATLALAAKRGLLEAPKPEKKPAHVVAMEREQKEKAERERREKEEREKREKERDIRGRDDRDNRDRDGRDRRRDDRRDDRRDDRRDDRREDRRDDREEPKKDTNVIRDLDYERERERERDRDK* # PASA_UPDATE: g3773.t1, single gene model update, valid-1, status:[pasa:asmbl_2187,status:12], valid-1 # PASA_UPDATE: g3773.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_2186,status:12], valid-1 NODE_1625_length_10141_cov_40.4335 . gene 5637 10023 . - . ID=g3773;Name=g3773.t1 NODE_1625_length_10141_cov_40.4335 . mRNA 5637 10023 . - . ID=g3773.t1;Parent=g3773;Name=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 9643 10023 . - . ID=g3773.t1.exon1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 9643 10023 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 9177 9296 . - . ID=g3773.t1.exon2;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 9177 9296 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 8677 8770 . - . ID=g3773.t1.exon3;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 8677 8770 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 8250 8427 . - . ID=g3773.t1.exon4;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 8250 8427 . - 2 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 7641 7800 . - . ID=g3773.t1.exon5;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 7641 7800 . - 1 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 7244 7297 . - . ID=g3773.t1.exon6;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 7244 7297 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 6549 6764 . - . ID=g3773.t1.exon7;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 6549 6764 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 6165 6342 . - . ID=g3773.t1.exon8;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 6165 6342 . - 0 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 5637 5742 . - . ID=g3773.t1.exon9;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . CDS 5672 5742 . - 2 ID=cds.g3773.t1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . three_prime_UTR 5637 5671 . - . ID=g3773.t1.utr3p1;Parent=g3773.t1 NODE_1625_length_10141_cov_40.4335 . mRNA 5637 10023 . - . ID=g3773.t1.1.5b6be70a;Parent=g3773;Name=g3773.t1 NODE_1625_length_10141_cov_40.4335 . exon 9643 10023 . - . ID=g3773.t1.1.5b6be70a.exon1;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 9643 10023 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 9177 9296 . - . ID=g3773.t1.1.5b6be70a.exon2;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 9177 9296 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 8677 8770 . - . ID=g3773.t1.1.5b6be70a.exon3;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 8677 8770 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 8250 8427 . - . ID=g3773.t1.1.5b6be70a.exon4;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 8250 8427 . - 2 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 7641 7800 . - . ID=g3773.t1.1.5b6be70a.exon5;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 7641 7800 . - 1 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 7244 7297 . - . ID=g3773.t1.1.5b6be70a.exon6;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 7244 7297 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 6549 6764 . - . ID=g3773.t1.1.5b6be70a.exon7;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 6549 6764 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 6165 6248 . - . ID=g3773.t1.1.5b6be70a.exon8;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . CDS 6246 6248 . - 0 ID=cds.g3773.t1.1.5b6be70a;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . exon 5637 5742 . - . ID=g3773.t1.1.5b6be70a.exon9;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . three_prime_UTR 6165 6245 . - . ID=g3773.t1.1.5b6be70a.utr3p1;Parent=g3773.t1.1.5b6be70a NODE_1625_length_10141_cov_40.4335 . three_prime_UTR 5637 5742 . - . ID=g3773.t1.1.5b6be70a.utr3p2;Parent=g3773.t1.1.5b6be70a #PROT g3773.t1 g3773 MQTAFSNVMHVYVFSGAVFAAGELVEAIVTLGTMSRDYDASEALCEGTTPFLLVGSDIDVTYTYSVTYTQYHPWDTQRTPHPADVTVTSMEVDTPVILGAVFLAFIAVLAMFRGLGAVWRLRKAALDAEDPWWALWCIRRCTGRNFFGISFSRAEDELREFGWEFVKGDVFRAPANHVLFASIAGKGAQVLMGGIFLSVLLIIDVLEYAPRGYTLMAAVWCYILSAPIGGYQAISTARMFSEMKLLHVIAVNAFAIPAVVLGPLGLVNAVLASVNSSSVLPTRQCLIIIGMWLLVDVPLVLVGAWLASRGKAPAAPVNVNQIPREIPAQPWYNHSLVVIPIMGILPYFPLSIAACDLAWNGVVSGFTTGIPTETIFLGLLVTIPTAMVVGMLQCGFQLTFEDYRWWWKAFLGPASSSVYFFITMAYYALGVAVKGSCGARAAIAITARIVSVCAAIGLLTGAAGFLGTYWFIRKVYSIARASD* #PROT g3773.t1.1.5b6be70a g3773 MQTAFSNVMHVYVFSGAVFAAGELVEAIVTLGTMSRDYDASEALCEGTTPFLLVGSDIDVTYTYSVTYTQYHPWDTQRTPHPADVTVTSMEVDTPVILGAVFLAFIAVLAMFRGLGAVWRLRKAALDAEDPWWALWCIRRCTGRNFFGISFSRAEDELREFGWEFVKGDVFRAPANHVLFASIAGKGAQVLMGGIFLSVLLIIDVLEYAPRGYTLMAAVWCYILSAPIGGYQAISTARMFSEMKLLHVIAVNAFAIPAVVLGPLGLVNAVLASVNSSSVLPTRQCLIIIGMWLLVDVPLVLVGAWLASRGKAPAAPVNVNQIPREIPAQPWYNHSLVVIPIMGILPYFPLSIAACDLAWNGVVSGFTTGIPTETIFLGLLVTIPTAMVVGMLQCGFQLTFE* # ORIGINAL: g7150.t1 original gene structure, not modified by PASA NODE_2318_length_6754_cov_39.0343 AUGUSTUS gene 1126 6153 . + . ID=g7150;Name=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS mRNA 1126 6153 . + . ID=g7150.t1;Parent=g7150;Name=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 1126 1773 . + . ID=g7150.t1.exon1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 1126 1773 . + 0 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 2094 2531 . + . ID=g7150.t1.exon2;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 2094 2531 . + 0 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 2852 2973 . + . ID=g7150.t1.exon3;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 2852 2973 . + 0 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 3118 3661 . + . ID=g7150.t1.exon4;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 3118 3661 . + 1 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 3911 4031 . + . ID=g7150.t1.exon5;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 3911 4031 . + 0 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 4341 4552 . + . ID=g7150.t1.exon6;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 4341 4552 . + 2 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 4716 4777 . + . ID=g7150.t1.exon7;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 4716 4777 . + 0 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 4974 5093 . + . ID=g7150.t1.exon8;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 4974 5093 . + 1 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 5395 5477 . + . ID=g7150.t1.exon9;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 5395 5477 . + 1 ID=cds.g7150.t1;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS exon 5792 6153 . + . ID=g7150.t1.exon10;Parent=g7150.t1 NODE_2318_length_6754_cov_39.0343 AUGUSTUS CDS 5792 6153 . + 2 ID=cds.g7150.t1;Parent=g7150.t1 #PROT g7150.t1 g7150 MDDASASRSASIEESGSFRLPSVSESRPSRSASKRVSFSLATKYAGNETTSSSSVAEAIKTASEATLAKPPPLSELEEASPGAIEGDVVTPLPTGQSGRIPPTHRMSIGPTPSTPTKHPPRMSVSLIYPTLNTTGASANAPDKPTGRQSLSLAVDVHLAVAKSPGTPSLLSPRTAKKGLLEAPTPSALTPTIPPSNADVDLDRRIDVVRRMEEELKMALVDADTPEGFEPQKRAVARKRVDQLMRQMDEMIGNDILKELRDRLATALEDYRKAQGGESLAAAELRITSLRARISALMRYGLNGHRASDAGVVSVDTDTTPSGFDSLYDAKKEKAEKSARLKRNLRAVKMAVEAVSWLRGVKKTRSVAKTADLPPWRLNKESVAVDPELGEFDAFATKMQKFSTNLDSEIDKSDADALFAKSGDALDPKGAKSHSTPLLNGEVQTGRSASTPLDAAHGTSHHGSASAGHVRTSVRSKSRSRSRSASHLSVGGQSSGVSVSPPDRHSTAFKLVDNTPVRIPDMPDLPTRSHGLSPPPSPQRPLFRSSRTPMPMTLDTLLSSDFSAPRHVQYVSRHILKDRLKLEEMASHHERPSLISPSTSGFATSPTEERSPSAGPATTTTTSAHGMGRSSPLHGSPVSAQSPLALIDPISTAAAMAESARLVYYPRGPDHWCTHEEASVKILKRRNVAEVQAVLEATEFEISMMVKHASEHNRRVASPIEDIMAPSELAASGIDIASDEVIWGSPTAPARDFKKRRLSGVPPPSKKAMAQLRWKHLRTVLKFAGNVKKHDIDHKSVSVGSLVSQLIRGVNPTIRAEAAKRLGLLGHRTQDVINVLTRRLEVDNDEIVQYESARALVLLGVWREQAISMMMDCMDMVDENPELCLDVLDAMAKSIKLAAVHPVR* # ORIGINAL: g6200.t1 original gene structure, not modified by PASA NODE_3103_length_4305_cov_86.9059 AUGUSTUS gene 922 4115 . + . ID=g6200;Name=g6200.t1 NODE_3103_length_4305_cov_86.9059 AUGUSTUS mRNA 922 4115 . + . ID=g6200.t1;Parent=g6200;Name=g6200.t1 NODE_3103_length_4305_cov_86.9059 AUGUSTUS exon 922 4115 . + . ID=g6200.t1.exon1;Parent=g6200.t1 NODE_3103_length_4305_cov_86.9059 AUGUSTUS CDS 922 4115 . + 0 ID=cds.g6200.t1;Parent=g6200.t1 #PROT g6200.t1 g6200 MAATTSLERDGIGAPVTQERCCDVTGRTGADADGSNDSDSADDVDDYLEERDEWAFLSPGFAHLSAPTTSAAPHATSSSAAPHVTSTSTSASTTPSHIGEQLLPSPPHTRASTAAGLRARDSGGQGATADVGVATGSDISGSTNGSHVGTASVDQCAHTGGRQVTCALGEARPVLMRITAIANALQLASHVTHPSPANPPDALSRSRGAAVDVDACAFMTLRTLSTAGLLSGSLVRLGCGRIVTALALPEDVEPSCDNTHIRANANKSKGRKKYNACIVPQLCFTTVDNDCVGSSMPSAVEDGVVYMSLNLAFNTLLHRTVCAETHSNAVSKALTDVLDMAVIACTTVHATAHCSPPRVASHCKLRRICSPNSRSSTDYSSSVRCHFASSRRVVVCGDVIGIPHIAEDEGRAVHTVFFKIASVSSCSHGDAAGNSSDADPRAATAENTLLLCESFVVDPSETTLTIEGSVASLVPAHSLANERTSLSAHAHAMHLWGEIRGLLSASLRSSMHHGHLRPVTALRVGTPETQDSANAITGSSIHAVMNGTSALSEVTHANQPPSLPVPAEAPSSHHRRRRHHAMTCSVLLSGPPGSGKASLATAVARSLGLHVMVVTCQLPSLSGASGVPAAGADEARLSAWVDAVFARARECLPCVIVMRHVESLVVRASNGGGADGAAHTVSRVALAIRKNLEAFSTAFSTDSNDSSKKIGGDDRRDTVHYPPPMLIATTNAADELPLSIRGCFVHELYADMPGESARLSMLSRALSHAPLGPDVSLVSVAKRTAGFASRDVRAVAVHAGMEAWRRAAAAPCTAPITCTGHTASESIAHDNVVCRPSVVDIAAAGPVILSGDMDAAVTALNGLRSPSGGVARIPHVTWNDVGGLGDVKREILETIQLPILRPDLFASGSGLQRSGVLLYGPPGTGKTLVAKAVATECALNFIGVKGPELINMYVGQSEKNVRDLFARARAARPCVIFFDELDSLAPRRGRNGDSGGVMDRVVSQLLAELDGAKSASDVFVIGATNRPDLLDPALLRPGRFDRLLYLGVASDVPTRANVLKALTR # PASA_UPDATE: g9638.t1, single gene model update, valid-1, status:[pasa:asmbl_5839,status:12], valid-1 NODE_3288_length_3821_cov_38.0064 . gene 80 3665 . + . ID=g9638;Name=g9638.t1 NODE_3288_length_3821_cov_38.0064 . mRNA 80 3665 . + . ID=g9638.t1;Parent=g9638;Name=g9638.t1 NODE_3288_length_3821_cov_38.0064 . five_prime_UTR 80 81 . + . ID=g9638.t1.utr5p1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 80 307 . + . ID=g9638.t1.exon1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 82 307 . + 0 ID=cds.g9638.t1;Parent=g9638.t1;5_prime_partial=true NODE_3288_length_3821_cov_38.0064 . exon 500 600 . + . ID=g9638.t1.exon2;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 500 600 . + 2 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 974 1126 . + . ID=g9638.t1.exon3;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 974 1126 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 1376 1490 . + . ID=g9638.t1.exon4;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 1376 1490 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 1769 1860 . + . ID=g9638.t1.exon5;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 1769 1860 . + 2 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 2038 2115 . + . ID=g9638.t1.exon6;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 2038 2115 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 2254 2361 . + . ID=g9638.t1.exon7;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 2254 2361 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 2529 2743 . + . ID=g9638.t1.exon8;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 2529 2743 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 2949 3036 . + . ID=g9638.t1.exon9;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 2949 3036 . + 1 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 3181 3266 . + . ID=g9638.t1.exon10;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 3181 3266 . + 0 ID=cds.g9638.t1;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . exon 3449 3665 . + . ID=g9638.t1.exon11;Parent=g9638.t1 NODE_3288_length_3821_cov_38.0064 . CDS 3449 3665 . + 1 ID=cds.g9638.t1;Parent=g9638.t1 #PROT g9638.t1 g9638 DVAPNRVPSITDMTVLSYHPAARAHIMHTAGVSLALVAAVIDISTEWLSDLKEGYCPEAFWLNKKFCCWTSEVNEDGECDLWVTWAESAGTNGQRSQFALNYFFYVLFAVIFACFSAVLVKYLAPYAAGSGIPQVKTIMGGFIIRGFLGWWTLLVKSVALVLSVASGMSLGKEGPFVHISCCFGNIFARLFDKYKKNEAKKRELFSAATAAGIAVAFGAPVGGILFSLEEVSYYFPYKTMWRAFFCALTAIATLTYLNPLRSGRLVLFYVSYDHPWHAFETIPAVFIGALGGLYGAAFIRLAIRWAAYRKSSFLGKYPISEVMAIALVTAIANYANVYQKGMSVELIRSLFSECLPGDTSDICTHKSSRVVVLLLLACAFKMIITIFTFGIKVPAGIFIPAMAIGACLGRVVGIGMHALVTSNPSWPLFHDSCPDTTTCITPGLYAMMGAASVLAGVTRMTGGLSIVTCSLFVCMVHLHCLGSTVLLPLTTA* # ORIGINAL: g2883.t1 original gene structure, not modified by PASA NODE_4457_length_1593_cov_25.4559_potentialcontaminant AUGUSTUS gene 121 456 . + . ID=g2883;Name=g2883.t1 NODE_4457_length_1593_cov_25.4559_potentialcontaminant AUGUSTUS mRNA 121 456 . + . ID=g2883.t1;Parent=g2883;Name=g2883.t1 NODE_4457_length_1593_cov_25.4559_potentialcontaminant AUGUSTUS exon 121 456 . + . ID=g2883.t1.exon1;Parent=g2883.t1 NODE_4457_length_1593_cov_25.4559_potentialcontaminant AUGUSTUS CDS 121 456 . + 0 ID=cds.g2883.t1;Parent=g2883.t1 #PROT g2883.t1 g2883 GFIAPETLHDGRCSAASDLYGLGVAAHEMYMKACRLVRDETDEWRVFLSVVLQLRSGNPKERGTVAGVLQTVRGELHRLCGDCDTPSLPEWMRVNAASRRKMHWQRRGHCV* # PASA_UPDATE: g6302.t1, single gene model update, valid-1, status:[pasa:asmbl_6261,status:12], valid-1 NODE_3594_length_3139_cov_36.8185 . gene 361 3069 . + . ID=g6302;Name=g6302.t1 NODE_3594_length_3139_cov_36.8185 . mRNA 361 3069 . + . ID=g6302.t1;Parent=g6302;Name=g6302.t1 NODE_3594_length_3139_cov_36.8185 . five_prime_UTR 361 361 . + . ID=g6302.t1.utr5p1;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . exon 361 808 . + . ID=g6302.t1.exon1;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . CDS 362 808 . + 0 ID=cds.g6302.t1;Parent=g6302.t1;5_prime_partial=true NODE_3594_length_3139_cov_36.8185 . exon 1139 1537 . + . ID=g6302.t1.exon2;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . CDS 1139 1537 . + 0 ID=cds.g6302.t1;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . exon 1850 2061 . + . ID=g6302.t1.exon3;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . CDS 1850 2061 . + 0 ID=cds.g6302.t1;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . exon 2255 2444 . + . ID=g6302.t1.exon4;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . CDS 2255 2444 . + 1 ID=cds.g6302.t1;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . exon 2692 3069 . + . ID=g6302.t1.exon5;Parent=g6302.t1 NODE_3594_length_3139_cov_36.8185 . CDS 2692 3069 . + 0 ID=cds.g6302.t1;Parent=g6302.t1;3_prime_partial=true #PROT g6302.t1 g6302 IGVADLQLGPDVLARSLANSSIPAILSNAVIASRHPLAPYVRRYYSYNSTSASGSTLGVGIIAALPSDSCGFGTCYDARGTVIELRDHMIYLQKAYDDMIAANPWVKFVVCILGRPPQYSTIVALAFSIRGPNAFIVVGGGYHISNVASDGISVPTAGFPLVLESATANRKAIVASALSYHYGGIFDVTVNAAGAPIKWGGGPVLLRSCDNASANVTCYANNATVLAQIMSVVAQADAYTATKIGRSLTSLPGGGIQCHFAECAVGNLIADAIRWRQRDFCEIALVSASSIRAGISAGNLTLLNASSIAVSAAVASVSIPGGVLVNVFQHAVSSIPSNASMYEAVFAQNITGRFLQVSGAKFSYDATKPPGNRLLGLQTLNIDGSYSEVTAKRVYKLCTLDFIRQGGENFAMFTGQDSVYKPYDQGPELANVIADYIAAISPLNYSATASRISARLVDTTIDLCQLDANQCLNSKTASTSNGDDATRIVSITVPIVGSVVLIGATVAVVLRARLARKIATMKSEEKRMKKQIPYEELEFGTK # PASA_UPDATE: g2367.t1, single gene model update, valid-1, status:[pasa:asmbl_6724,status:12], valid-1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . gene 1 498 . - . ID=g2367;Name=g2367.t1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . mRNA 1 498 . - . ID=g2367.t1;Parent=g2367;Name=g2367.t1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . five_prime_UTR 274 498 . - . ID=g2367.t1.utr5p1;Parent=g2367.t1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . exon 1 498 . - . ID=g2367.t1.exon1;Parent=g2367.t1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . CDS 79 273 . - 0 ID=cds.g2367.t1;Parent=g2367.t1 NODE_3911_length_2523_cov_35.3159_potentialcontaminant . three_prime_UTR 1 78 . - . ID=g2367.t1.utr3p1;Parent=g2367.t1 #PROT g2367.t1 g2367 MTATPNMATTKNMTATVNMATTKKMTATPNMTTIPNMTATPNMTAMVNTNMTAMVNREHDCAGT* # ORIGINAL: g5175.t1 original gene structure, not modified by PASA NODE_2866_length_4893_cov_42.2036 AUGUSTUS gene 117 1411 . - . ID=g5175;Name=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS mRNA 117 1411 . - . ID=g5175.t1;Parent=g5175;Name=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 969 1411 . - . ID=g5175.t1.exon1;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 969 1411 . - 0 ID=cds.g5175.t1;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 724 798 . - . ID=g5175.t1.exon2;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 724 798 . - 1 ID=cds.g5175.t1;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 436 449 . - . ID=g5175.t1.exon3;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 436 449 . - 1 ID=cds.g5175.t1;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 117 176 . - . ID=g5175.t1.exon4;Parent=g5175.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 117 176 . - 2 ID=cds.g5175.t1;Parent=g5175.t1 #PROT g5175.t1 g5175 MDHSGIEDCGDIDRLRLAYLWQRDELKLREETVASLQTQVATLKNENDRLISAVSKLVRRKSSASSSDGLAPSASETLPVVVGSPSSVTSASFTSSSVASSSAVSLRPAGTASSAVDDLLAKLDNCWGDIAAQITPDETTVPREEDSLWSDGDVQGRGPAKGQFIRLDSVDVSVGGKAADPLFGRQDSFNMLQTGTQ # ORIGINAL: g5177.t1 original gene structure, not modified by PASA NODE_2866_length_4893_cov_42.2036 AUGUSTUS gene 3513 4743 . + . ID=g5177;Name=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS mRNA 3513 4743 . + . ID=g5177.t1;Parent=g5177;Name=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 3513 4058 . + . ID=g5177.t1.exon1;Parent=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 3513 4058 . + 0 ID=cds.g5177.t1;Parent=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 4248 4343 . + . ID=g5177.t1.exon2;Parent=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 4248 4343 . + 0 ID=cds.g5177.t1;Parent=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS exon 4666 4743 . + . ID=g5177.t1.exon3;Parent=g5177.t1 NODE_2866_length_4893_cov_42.2036 AUGUSTUS CDS 4666 4743 . + 0 ID=cds.g5177.t1;Parent=g5177.t1 #PROT g5177.t1 g5177 MWPAGGRHKYRALTSAENLDFANDITNVVLAKKDGGVRNIVSSVGSISRSNASSSSRPRVVAIDSLSDDDEVLFGDDEAKLFDRNNDAPLRLSEGLGDDAEDDIAFDNPERVHRLVRKVTWRLLPFLMLLYVAAFLDRANLSNAKATMSTNLHLTSTDYGIAASFFFVSYIIFEVPSNMMLERLPARAWIARIIISWGVIATLTMFVKNRASLMSSRGAPTSISLLTVDGVDGLMPMAF* # PASA_UPDATE: g5176.t1, single gene model update, valid-1, status:[pasa:asmbl_5142,status:12], valid-1 NODE_2866_length_4893_cov_42.2036 . gene 1908 2682 . + . ID=g5176;Name=g5176.t1 NODE_2866_length_4893_cov_42.2036 . mRNA 1908 2682 . + . ID=g5176.t1;Parent=g5176;Name=g5176.t1 NODE_2866_length_4893_cov_42.2036 . five_prime_UTR 1908 1951 . + . ID=g5176.t1.utr5p1;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . exon 1908 1975 . + . ID=g5176.t1.exon1;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . CDS 1952 1975 . + 0 ID=cds.g5176.t1;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . exon 2132 2273 . + . ID=g5176.t1.exon2;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . CDS 2132 2273 . + 0 ID=cds.g5176.t1;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . exon 2413 2682 . + . ID=g5176.t1.exon3;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . CDS 2413 2492 . + 2 ID=cds.g5176.t1;Parent=g5176.t1 NODE_2866_length_4893_cov_42.2036 . three_prime_UTR 2493 2682 . + . ID=g5176.t1.utr3p1;Parent=g5176.t1 #PROT g5176.t1 g5176 MEPENVMQPNLRRLLGTRMRVLIADGRTVCGRFMCTDRSMNLILNETEELRPTEGDALPTQRKLGTVMVPGKYIVRAEASQ* # ORIGINAL: g9451.t1 original gene structure, not modified by PASA NODE_1860_length_8863_cov_42.134 AUGUSTUS gene 6540 7731 . + . ID=g9451;Name=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS mRNA 6540 7731 . + . ID=g9451.t1;Parent=g9451;Name=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 6540 6762 . + . ID=g9451.t1.exon1;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 6540 6762 . + 0 ID=cds.g9451.t1;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 6864 7127 . + . ID=g9451.t1.exon2;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 6864 7127 . + 2 ID=cds.g9451.t1;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 7317 7445 . + . ID=g9451.t1.exon3;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 7317 7445 . + 2 ID=cds.g9451.t1;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 7604 7731 . + . ID=g9451.t1.exon4;Parent=g9451.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 7604 7731 . + 2 ID=cds.g9451.t1;Parent=g9451.t1 #PROT g9451.t1 g9451 MSTLAACRLISASKCGVTLQLDDPQLAPEVAHTLAASMESIVAGIQSLCAMRRFQGSLACRRCHMLEPAVTLVVRVLGHPAMAQHGDRLERALFTLCEQLAEAVLHWEPMEIPGAFSDDVRGVLAAVVAHTAVECHPLSFAVVRVLVSRLGMVADLLRHSLTEDIAPLASRALDNGRYLLDALESIIMGMSSFIRNAVNVDPHTLETHIAEFHQTAESLEECLVNIPNAFPLFSRRVWRIVTLLFST* # ORIGINAL: g9449.t1 original gene structure, not modified by PASA NODE_1860_length_8863_cov_42.134 AUGUSTUS gene 103 4991 . + . ID=g9449;Name=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS mRNA 103 4991 . + . ID=g9449.t1;Parent=g9449;Name=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 103 898 . + . ID=g9449.t1.exon1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 103 898 . + 2 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 1057 2107 . + . ID=g9449.t1.exon2;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 1057 2107 . + 1 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 2300 2465 . + . ID=g9449.t1.exon3;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 2300 2465 . + 0 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 2642 2781 . + . ID=g9449.t1.exon4;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 2642 2781 . + 2 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 3055 3170 . + . ID=g9449.t1.exon5;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 3055 3170 . + 0 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 3397 3542 . + . ID=g9449.t1.exon6;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 3397 3542 . + 1 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 3820 3980 . + . ID=g9449.t1.exon7;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 3820 3980 . + 2 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 4120 4203 . + . ID=g9449.t1.exon8;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 4120 4203 . + 0 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 4521 4733 . + . ID=g9449.t1.exon9;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 4521 4733 . + 0 ID=cds.g9449.t1;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 4905 4991 . + . ID=g9449.t1.exon10;Parent=g9449.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 4905 4991 . + 0 ID=cds.g9449.t1;Parent=g9449.t1 #PROT g9449.t1 g9449 RSEGTSDGLDMVEDYFHEEEPSSKESRTPVLSRSPSSNALSPARPTSPPIDEKDTPGNRALAVVSSESQLSGSHPQSQIQSQSQTPTAPVPMPVTSPREAAERSGTPVGTPSHPFVAPSPLTHRGSIPALNNITGGVPPQSPGSGSGSVGGSLASSGSMSGAGGLLDFKAKVSSIFGEVAEHAVDSIKRKLRRQSGVPEQAAKVYPAGAELTGNATFYQTSGEGSLADAIGGGGGGRAADIAFRAVAERKKTLPGWLIRYWLRAEPHKNAVGRVSRASSSLVDLLLCDNLSVATALGEATQSTELDELSKTLMRVFEGVGESLTFLSEAIRAEVVRTSTANTLFRSNSLASKCLTVYCRMIGKPYLQETLGKAVRRVLASPSFEISPEKAGPGTDLDANLKALEEACLQMLDRILGGLDTFPAPLRRICSVIRREVNGKFPGRALHGVGAFVFLRYFCPALVSPEGFHFVRSPPTAEARRNLILVSKVLQNLANGVEFGAKEQFMTPLNGFIQQSTPRLMDYFDRVSTVTDEVLRQADDVYVDMPKALVDTALGQVQVLMGLAIDGLAVRLADRKVIETVAHSPADDLNVILRGFGGKTVEHVLAQSGLFDTFEEILVTDGQCVLKCIMENAPAKHHDDLARASIQLLSGVPPVAADFVLQYIKADILAAASPSSLQDFTLGNRLLASFARFTTQEYLRTTLKDLVQEVCASRKSFEVDPARATRDENIRENMDRLMTTSLKFLGAIANSVVKFPIEFRRLCHAMCKEIEARFPGEGESAVSRFLFLRYFCPAIASPSVYGLTSATPSASAHRGLVLVSYTLRNIASGTQFKDVHMGEMNSLLGTHTTLLIDFVHMVIDVPREVGDADHKSPTASIFYKKALESKARPMSPTAVATTAGGAGAHGQSVFFNPPASAGASASYSDGDNRVGALWTLQRILADTWDELQPHLEGRTISETVSYHIFDRLSSVLAVARKGSRPRELSV* # ORIGINAL: g9452.t1 original gene structure, not modified by PASA NODE_1860_length_8863_cov_42.134 AUGUSTUS gene 8233 8505 . - . ID=g9452;Name=g9452.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS mRNA 8233 8505 . - . ID=g9452.t1;Parent=g9452;Name=g9452.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 8233 8505 . - . ID=g9452.t1.exon1;Parent=g9452.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 8233 8505 . - 0 ID=cds.g9452.t1;Parent=g9452.t1 #PROT g9452.t1 g9452 MDLVEGNPTAREAALRFGQSWADDKGAPFFTTSSKTGANVTEVFDAVAAKSLNVELGRSSSPSSAVSPDTIRLTDAPRNAQAAQGGDCGC* # ORIGINAL: g9450.t1 original gene structure, not modified by PASA NODE_1860_length_8863_cov_42.134 AUGUSTUS gene 5850 6451 . + . ID=g9450;Name=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS mRNA 5850 6451 . + . ID=g9450.t1;Parent=g9450;Name=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 5850 5903 . + . ID=g9450.t1.exon1;Parent=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 5850 5903 . + 0 ID=cds.g9450.t1;Parent=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 6056 6260 . + . ID=g9450.t1.exon2;Parent=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 6056 6260 . + 0 ID=cds.g9450.t1;Parent=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS exon 6387 6451 . + . ID=g9450.t1.exon3;Parent=g9450.t1 NODE_1860_length_8863_cov_42.134 AUGUSTUS CDS 6387 6451 . + 2 ID=cds.g9450.t1;Parent=g9450.t1 #PROT g9450.t1 g9450 MRHLCSVYKDYHHDNASRVQTQDTEILRLQQELLLLRGFVGKIFVEGHGVSMDTESRLTDDREGSLHTRAHPQSAWQAETPPGTAQESSDELEDAILLNTAFMENGM* # ORIGINAL: g8933.t1 original gene structure, not modified by PASA NODE_4351_length_1768_cov_35.3213 AUGUSTUS gene 105 1296 . + . ID=g8933;Name=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS mRNA 105 1296 . + . ID=g8933.t1;Parent=g8933;Name=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS exon 105 261 . + . ID=g8933.t1.exon1;Parent=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS CDS 105 261 . + 1 ID=cds.g8933.t1;Parent=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS exon 497 823 . + . ID=g8933.t1.exon2;Parent=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS CDS 497 823 . + 0 ID=cds.g8933.t1;Parent=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS exon 1174 1296 . + . ID=g8933.t1.exon3;Parent=g8933.t1 NODE_4351_length_1768_cov_35.3213 AUGUSTUS CDS 1174 1296 . + 0 ID=cds.g8933.t1;Parent=g8933.t1 #PROT g8933.t1 g8933 LASEAINLETSWRKIFRRLFFEAFHLDEPIRAYWNNTRKFKMLVNEALEGAMILTSRTRLEWWAKHTLPPGLQYVAVTGVMGDATLSDMWHLLGNDAAYNTRSVDYSLMRSAFYETFAVSGSQMNDGQVTLERALFWPALHRKLNPAQRPYKGELLCVLGADHWGMAFPEAFETRVTTTNPFPRDVLIRALGTYLAMSRNK* # PASA_UPDATE: g12663.t1, single gene model update, valid-1, status:[pasa:asmbl_6382,status:12], valid-1 NODE_3668_length_2992_cov_40.434 . gene 408 1098 . + . ID=g12663;Name=g12663.t1 NODE_3668_length_2992_cov_40.434 . mRNA 408 1098 . + . ID=g12663.t1;Parent=g12663;Name=g12663.t1 NODE_3668_length_2992_cov_40.434 . five_prime_UTR 408 480 . + . ID=g12663.t1.utr5p1;Parent=g12663.t1 NODE_3668_length_2992_cov_40.434 . exon 408 1098 . + . ID=g12663.t1.exon1;Parent=g12663.t1 NODE_3668_length_2992_cov_40.434 . CDS 481 939 . + 0 ID=cds.g12663.t1;Parent=g12663.t1 NODE_3668_length_2992_cov_40.434 . three_prime_UTR 940 1098 . + . ID=g12663.t1.utr3p1;Parent=g12663.t1 #PROT g12663.t1 g12663 MSLPPLSHTETINCPVDHLWALMLDKMENPTKYVPGVSDVSIVSRNEDGSIVRRMLPPGKGGYVVEHIYTTHDEAAKTRTVHFDLMDHPIFRGSVVNVVDYSVAPPKLTYTLTWDAKDETPEGRAAAAGLRPPSMQFAVVHAKQVAEATAPK* # ORIGINAL: g12664.t1 original gene structure, not modified by PASA NODE_3668_length_2992_cov_40.434 AUGUSTUS gene 1577 2778 . - . ID=g12664;Name=g12664.t1 NODE_3668_length_2992_cov_40.434 AUGUSTUS mRNA 1577 2778 . - . ID=g12664.t1;Parent=g12664;Name=g12664.t1 NODE_3668_length_2992_cov_40.434 AUGUSTUS exon 2596 2778 . - . ID=g12664.t1.exon1;Parent=g12664.t1 NODE_3668_length_2992_cov_40.434 AUGUSTUS CDS 2596 2778 . - 0 ID=cds.g12664.t1;Parent=g12664.t1 NODE_3668_length_2992_cov_40.434 AUGUSTUS exon 1577 2281 . - . ID=g12664.t1.exon2;Parent=g12664.t1 NODE_3668_length_2992_cov_40.434 AUGUSTUS CDS 1577 2281 . - 0 ID=cds.g12664.t1;Parent=g12664.t1 #PROT g12664.t1 g12664 MQHLGLRDLYKPDMEALQVNLYQFSRLVYDHCPTLHRHLERCDVKPFLYAAAWFLTLFASQFPLAFAFRVLDVLLAHGRIVIFKIGITLLRDSEQRLLRREGLEEIVSFLKTELPLRPVAELVGLVWTAMQTQAVTPERLAAFENEYHIMRESMENGEDVSASMRLAAQQWAAEKQDLEARLALADRRNQQLRSKNMSLETEVLAIRDTIIADYQRLLETMRAEKEALEDAAGRAQAATRRMETQLRDTEAQLMSARMRLADSENEKNALSTRVRALQQAAADADKQTRRTQSVT* # PASA_UPDATE: g12299.t1, single gene model update, valid-1, status:[pasa:asmbl_9286,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 19266 21267 . - . ID=g12299;Name=g12299.t1 NODE_76_length_43976_cov_42.6929 . mRNA 19266 21267 . - . ID=g12299.t1;Parent=g12299;Name=g12299.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 21002 21267 . - . ID=g12299.t1.utr5p1;Parent=g12299.t1 NODE_76_length_43976_cov_42.6929 . exon 20386 21267 . - . ID=g12299.t1.exon1;Parent=g12299.t1 NODE_76_length_43976_cov_42.6929 . CDS 20386 21001 . - 0 ID=cds.g12299.t1;Parent=g12299.t1 NODE_76_length_43976_cov_42.6929 . exon 19266 20275 . - . ID=g12299.t1.exon2;Parent=g12299.t1 NODE_76_length_43976_cov_42.6929 . CDS 19569 20275 . - 2 ID=cds.g12299.t1;Parent=g12299.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 19266 19568 . - . ID=g12299.t1.utr3p1;Parent=g12299.t1 #PROT g12299.t1 g12299 MLALATMAPTTHHVRRTGGIECTVATYTSPTFKARTTITIEQHQQSSCRIEADAVVPDGIRVHANQQLKPSFGRAAPIYPSELAALVDRSDGALVIDCRSLAQFNGSHIRGAVNIICSVILKRRILRGNVTVEKLVSPCDYHPSPAPAAGASPKLQQRSAKPTRRPVIIYDDASTDWSSIQASEAMMMLLQVAEADMSVAPYWLHGGFNAFARSHSGLCERTRPSICTAPPMTPCMKPEPMLKLSMPPSEILPFLFLGTEKNSGDLPILESLNISIILNVAKECSNQFDDGRMLYKKCPLEDSSTENIRRVFDEAFEFIDSARRQNRRVLVHCLGGVSRSVAVVIGYLMSRYSMNLDDAYSFVRERRPMIAPNLNFMGQLLELQEELKRQADEILGGASDPFETVQEAQQPPPLPQFAQPVPPPTPFGIPAANASRFAWL* # ORIGINAL: g12297.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 15049 15696 . - . ID=g12297;Name=g12297.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 15049 15696 . - . ID=g12297.t1;Parent=g12297;Name=g12297.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 15049 15696 . - . ID=g12297.t1.exon1;Parent=g12297.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 15049 15696 . - 0 ID=cds.g12297.t1;Parent=g12297.t1 #PROT g12297.t1 g12297 MEPVRPYRTILVEEPLGQCERCRATFKLKRAVDCVCKAAIYCGSGCASKSHHGCTGRPPIVKAVNADNFSRTLLDKMTRPQGPAVFKAIGKADALYGKPDLAAGFAALRRAGESGHGSSALVCALLYTLRFNLPAAKPSPRSGAAAAEDEEVDLATVSTKLSDALALRYYILAAEAGYFPAYMLAAQRLTMGNDGIEGRAGLDFLASDYLLRCSN* # PASA_UPDATE: g12303.t1, single gene model update, valid-1, status:[pasa:asmbl_9291,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 32045 36161 . + . ID=g12303;Name=g12303.t1 NODE_76_length_43976_cov_42.6929 . mRNA 32045 36161 . + . ID=g12303.t1;Parent=g12303;Name=g12303.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 32045 32317 . + . ID=g12303.t1.utr5p1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 32462 32573 . + . ID=g12303.t1.utr5p2;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 32045 32317 . + . ID=g12303.t1.exon1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 32462 33217 . + . ID=g12303.t1.exon2;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 32574 33217 . + 0 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 33308 33597 . + . ID=g12303.t1.exon3;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 33308 33597 . + 1 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 33690 33774 . + . ID=g12303.t1.exon4;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 33690 33774 . + 2 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 33900 33963 . + . ID=g12303.t1.exon5;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 33900 33963 . + 1 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 34074 34799 . + . ID=g12303.t1.exon6;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 34074 34799 . + 0 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 35072 35299 . + . ID=g12303.t1.exon7;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 35072 35299 . + 0 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 35384 35627 . + . ID=g12303.t1.exon8;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 35384 35627 . + 0 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . exon 35786 36161 . + . ID=g12303.t1.exon9;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . CDS 35786 35943 . + 2 ID=cds.g12303.t1;Parent=g12303.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 35944 36161 . + . ID=g12303.t1.utr3p1;Parent=g12303.t1 #PROT g12303.t1 g12303 MSASLTQPFEGTRAHRSRSPSTSQEERTLKFKAPQIIDESWTNATDENSTASSYAGEADFRLPIRKMSNVDPPVGLRRKISGTPESDLDSAYDTERTQIVRGNGVFEAIPPRMEDDESVAHVRTVSIEKIKVITSDLRLEIARIEENLRLAQTYVHNQSDEAHIMAADFQESEHLSQAQEKERRRLEERLKAEADELAEAEKVQRQQAALWQKMRDMQTRIHNLEEAREINSAARARLNTKREAFEVKVAHIAERQMNERKQLDDAQKRQDINTQMLLELEVKHLSHREQATILKTQRLDAEHFRVIQRKQAEQLRESQLMEQKHTQKEFELEFRTAEGRENLDADHKLEVLNILVSQKKELEEEQDRMAEQQQAIEAIQIKEMQRLQSMQLLAAQRRQARELGRLQKQQARIRQRARTAELQEQYSDFVKEQSETGSSRNDETSSHGKSQTTASSSNLSDSIVDEGQEADEQSAREALAERNRMKNSSEDAQKAMLEQQKVEASQRVEKNRDNITTMQRRQVRALEELRRQQKEEMSTYDKDSQKMMVELKNEQEEEYKNMRREHAEEMGQLQEMQAREKLTVRQADELERRLALELDKERQLSNRLLYQMLPKTVADELKLGRKIDPETFESVTIFFSDICGFTELASRSNPMQIVSLLNKLYTVFDSIVDRYDAYKVETIGDSYMIVSGLPIRNDNHAVVMADLAIELRSAATAIDVSDQETDKLSLRVGLHSGGVLAGVVGTKMPRYCLFGDTVNTASRMESTGEPLKIHVSPTSYALLADSYHFEERGTVEVKGKGAMATYWLIGRK* # PASA_UPDATE: g12300.t1, single gene model update, valid-1, status:[pasa:asmbl_9290,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 22798 25802 . + . ID=g12300;Name=g12300.t1 NODE_76_length_43976_cov_42.6929 . mRNA 22798 25802 . + . ID=g12300.t1;Parent=g12300;Name=g12300.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 22798 22911 . + . ID=g12300.t1.utr5p1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 22798 23263 . + . ID=g12300.t1.exon1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 22912 23263 . + 0 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 23365 23448 . + . ID=g12300.t1.exon2;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 23365 23448 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 23540 23689 . + . ID=g12300.t1.exon3;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 23540 23689 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 23847 23954 . + . ID=g12300.t1.exon4;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 23847 23954 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 24192 24443 . + . ID=g12300.t1.exon5;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 24192 24443 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 24652 24779 . + . ID=g12300.t1.exon6;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 24652 24779 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 24990 25164 . + . ID=g12300.t1.exon7;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 24990 25164 . + 0 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . exon 25335 25802 . + . ID=g12300.t1.exon8;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . CDS 25335 25612 . + 2 ID=cds.g12300.t1;Parent=g12300.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 25613 25802 . + . ID=g12300.t1.utr3p1;Parent=g12300.t1 #PROT g12300.t1 g12300 MILVEAALLRGGVYFAGECVRCAITFTNTARPPRVSASAEWAAEQRQSDEALPLSTVPSQSANGKSKVETIAWATAQVHCHVSYNPNLVRVPSEYIASASSVVPSITTQTALAAQAKEDHGFSVFATPPTILFCDLELAAGEAKTFEYVLRLPATVPPSHSGHALKYSYKVVVGAQKVNAAASLLRLPFRVFCIGDKLGGIEVGPEGNMDSGDRFRPDALPTASRASSIVGDTEPSPLSSRSPSVHEDLGAKGLVAGRGRHNGHERQLSAASDSSRDTASFSMDGGPSQLAVPSLEQFMEALMALLARHQAANRTSMYGIGRADASIARFRLTKTVYKLGDDIVGEFDFSLASLPCFQVSVILESEETIADGMALAAKPTVRQVAAEHRMFCRFARTTHFIMAVPLSGSPDFETDLVRVRWRLRFEFVAGSSSSITSSGSMPAHIVVDGGIPVMLSGTVEHDSARGMTSWRAPHSSEVETLAWSLPIKVLPAHPATTPLMATTASLKM* # ORIGINAL: g12295.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 9694 13616 . + . ID=g12295;Name=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 9694 13616 . + . ID=g12295.t1;Parent=g12295;Name=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 9694 10214 . + . ID=g12295.t1.exon1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 9694 10214 . + 0 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 10699 10991 . + . ID=g12295.t1.exon2;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 10699 10991 . + 1 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 11183 11379 . + . ID=g12295.t1.exon3;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 11183 11379 . + 2 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 11861 12010 . + . ID=g12295.t1.exon4;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 11861 12010 . + 0 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 12423 12512 . + . ID=g12295.t1.exon5;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 12423 12512 . + 0 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 12803 12956 . + . ID=g12295.t1.exon6;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 12803 12956 . + 0 ID=cds.g12295.t1;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 13429 13616 . + . ID=g12295.t1.exon7;Parent=g12295.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 13429 13616 . + 2 ID=cds.g12295.t1;Parent=g12295.t1 #PROT g12295.t1 g12295 MPFVACRGVGHAIMLLCATAAAVCAWAGAGALGIPMSERELPMRVHLKTDTETFTFEYFLALEDGRIYYKINDEVTPDRSSEWALLPPGDGLPTVADAQFNCSSVAAISADDNGLVALCADNHLLYLLNFGEQLVPNLRHEWAKGDAIDALTKITDAVHAAPDSKSFRWTKHGWGRPIPALMHLPDGALWTFSQRGKSNGHFEDIDGNSHASGIGCTTVYSVHASGAYVCYVDGWIPPVLCNFKTCTPRQGRVIPIAIAASSSTVFIMDASGNMFTRLGDFDILGQDPVFMHYSYDRKSSSAVRTELALPDGSDITKADVWILPPEDWRQQPPIDGQITSVITILQTGEGNAARELRVQGVDDAGHGGYYFKGIYDAQWGFVQTDDQITRPFIRQGPIVLGPPIVRDYIRGPILSNIKTSAPVSLSLHEFEPNCPPARLRFSFGDGLVIDAALHFADHIYSIETATLIVPSEMFSSDNDDVRLVAHTLIVDESHRFVQFLVHMDVTKGLPTDFVSLFTVAPSLLHWRFAA* # PASA_UPDATE: g12302.t1, single gene model update, valid-1, status:[pasa:asmbl_9287,status:12], valid-1 NODE_76_length_43976_cov_42.6929 . gene 28928 31414 . - . ID=g12302;Name=g12302.t1 NODE_76_length_43976_cov_42.6929 . mRNA 28928 31414 . - . ID=g12302.t1;Parent=g12302;Name=g12302.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 31329 31414 . - . ID=g12302.t1.utr5p1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 31284 31414 . - . ID=g12302.t1.exon1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 31284 31328 . - 0 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 31009 31144 . - . ID=g12302.t1.exon2;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 31009 31144 . - 0 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 30839 30882 . - . ID=g12302.t1.exon3;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 30839 30882 . - 2 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 30266 30609 . - . ID=g12302.t1.exon4;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 30266 30609 . - 0 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 29783 30107 . - . ID=g12302.t1.exon5;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 29783 30107 . - 1 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 29452 29631 . - . ID=g12302.t1.exon6;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 29452 29631 . - 0 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . exon 28928 29334 . - . ID=g12302.t1.exon7;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . CDS 29131 29334 . - 0 ID=cds.g12302.t1;Parent=g12302.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 28928 29130 . - . ID=g12302.t1.utr3p1;Parent=g12302.t1 #PROT g12302.t1 g12302 MLQTLAKQAGRAQEKVKQKLGKADETVDESFNNHVRNNTKQNAQSAHILKEAQHYLKTMQAMAAATNSLLEALFEAHYDEERPTDQFGPCVKEIMRQYTDLQDKISDQLINPMSLYVAQFPEIKKKIEKRDRKLIDYDRYRHALDSTRAKQKVSEKEIQKAEEQHATARQLYEEINDQLNAELPAFYEDRKQFYHAIFHTVFTAEAAHHQACADTYQQLHGIGTDGADIDSLVIPASSRFEAFAVAPSPAARAAAAEDDGVTLGPNLISAPPPAAAHAAHPQPRGSISSESEHPAPLLRANSEQGIKPQIGARPPTHQVVASAAHTPIHVPVPAPRPAVLPATVAAFIKQHGSRVVKKVRATHPYDSGEDDELQFKKGDLIYVVQPEAGADEVDDGWDYGLTENVAVPGVFPLNFTEPYEEGILS* # ORIGINAL: g12298.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 16059 19191 . + . ID=g12298;Name=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 16059 19191 . + . ID=g12298.t1;Parent=g12298;Name=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 16059 16187 . + . ID=g12298.t1.exon1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 16059 16187 . + 0 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 16397 16512 . + . ID=g12298.t1.exon2;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 16397 16512 . + 0 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 16651 17276 . + . ID=g12298.t1.exon3;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 16651 17276 . + 1 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 17619 17778 . + . ID=g12298.t1.exon4;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 17619 17778 . + 2 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 17971 18123 . + . ID=g12298.t1.exon5;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 17971 18123 . + 1 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 18296 18374 . + . ID=g12298.t1.exon6;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 18296 18374 . + 1 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 18518 18676 . + . ID=g12298.t1.exon7;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 18518 18676 . + 0 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 18758 18998 . + . ID=g12298.t1.exon8;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 18758 18998 . + 0 ID=cds.g12298.t1;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 19118 19191 . + . ID=g12298.t1.exon9;Parent=g12298.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 19118 19191 . + 2 ID=cds.g12298.t1;Parent=g12298.t1 #PROT g12298.t1 g12298 MSAKGQHAAHTGASRASAFMLRLGERLRAELASELLSRDAFVAALRAAVENVSNERLRKEVLSSFEEQAEQVWLSVGGGSRRVEFAYNLRSIDGLSQAVSAAESHAQPQKSRVLLRHTLHAFSRHPGCKSVLATALRPEHADSDGEGEVDASCPLGVRAAKALRTAAVLLASSTNVRVAGNAQALLEYAEFFIDVASPATDGLLARGNTGTQRTKTLAAARSLKKNYRHFFEVVSVVRGLDSSLTHTSGTISLADFLAAAVSQYVDLSLLASPVDGSVEQDVGTVLSLVLGQSRGHVFDALAQVSVGKNPRSTLLPSDIEAIARVYTAAMSQPPVPLTLASYARFLATVRVAIAFASLLTGRTAAKSALDAAVNAALSIEPPGETGAILVEIGMRLHQEGSVSHFLVRRATDSQFDEFVRQVLDAPSHDDVPSDANANGLFFVDVTGRGGAETEDAAVAAKSASRLIGQLQADEGAVELTVDANGETLSSGADAGPAGARPGVQRKRQRYHVAVDGAPTDNSAGAAAATGAANNSVHAPSTPRSKRARVDATASESADVPMSPARSTRSRSRVGAAHE* # PASA_UPDATE: g12305.t1, single gene model update, valid-1, status:[pasa:asmbl_9288,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 38504 41346 . - . ID=g12305;Name=g12305.t1 NODE_76_length_43976_cov_42.6929 . mRNA 38504 41346 . - . ID=g12305.t1;Parent=g12305;Name=g12305.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 41244 41346 . - . ID=g12305.t1.utr5p1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 41064 41346 . - . ID=g12305.t1.exon1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 41064 41243 . - 0 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 40805 40949 . - . ID=g12305.t1.exon2;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 40805 40949 . - 0 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 40593 40673 . - . ID=g12305.t1.exon3;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 40593 40673 . - 2 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 40037 40477 . - . ID=g12305.t1.exon4;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 40037 40477 . - 2 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 39660 39860 . - . ID=g12305.t1.exon5;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 39660 39860 . - 2 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 39376 39455 . - . ID=g12305.t1.exon6;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 39376 39455 . - 2 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 38980 39180 . - . ID=g12305.t1.exon7;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 38980 39180 . - 0 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . exon 38504 38794 . - . ID=g12305.t1.exon8;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . CDS 38657 38794 . - 0 ID=cds.g12305.t1;Parent=g12305.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 38504 38656 . - . ID=g12305.t1.utr3p1;Parent=g12305.t1 #PROT g12305.t1 g12305 MGKGLAGRQGKLYVQVGLTTAFFFVEIIVGHMTNSISLVADSFHMLSDIFSLLIGIYAVKAAKKTISEKNTYGWIRAEVLGALINGIFLLALCFSIVIEAIQRFFTIEEIKDPKLVLIVGGVGLFINIIGLFMFSGHGHSHGGGGHGHAHSGAAAVAEATHDEGHGHSHEHGHSHGDKKDKKGKKADKSHKKEKHAHGHGHGNAHATEGGDCSSAHSHGGDTHGDSHGDTHESHGHSHSHGAVELSAIADPAHPPVVSDGVEGINVVATPEHPGETAVNMGAGAAAHGSHGNMNMHGVFLHVLGDALGSIAVMISATVIWLSDWSGRFYMDPVMSLLFTTLIIVSTVPLVKHAALILLQGIPKHINLDMLRDQLVKMPGVVDIHELHVWQLADEKFIATVHVTCDTQQDYMTLAALMKALFHSIGVHSTTIQPEFIQLSNAESLDDDKLCLLDCGDDDNASCKTNVCCTSDKNKLVRRKTANRSPSAL* # PASA_UPDATE: g12304.t1, single gene model update, valid-1, status:[pasa:asmbl_9293,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 36311 38005 . + . ID=g12304;Name=g12304.t1 NODE_76_length_43976_cov_42.6929 . mRNA 36311 38005 . + . ID=g12304.t1;Parent=g12304;Name=g12304.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 36311 36441 . + . ID=g12304.t1.utr5p1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . exon 36311 36534 . + . ID=g12304.t1.exon1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . CDS 36442 36534 . + 0 ID=cds.g12304.t1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . exon 36651 36748 . + . ID=g12304.t1.exon2;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . CDS 36651 36748 . + 0 ID=cds.g12304.t1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . exon 36910 37214 . + . ID=g12304.t1.exon3;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . CDS 36910 37214 . + 1 ID=cds.g12304.t1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . exon 37386 38005 . + . ID=g12304.t1.exon4;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . CDS 37386 37888 . + 2 ID=cds.g12304.t1;Parent=g12304.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 37889 38005 . + . ID=g12304.t1.utr3p1;Parent=g12304.t1 #PROT g12304.t1 g12304 MGKSNRGGSSTASTINTTSSNSGTIGRKDAKAAEMKKRTASGPTEVVTVNVKSAEGLRVQRAARALSSSAVRKEQRPSLSEAANPGPRVSVAQAMVTDTDDRSAFFDGESLPRHASFSSFTEQAVIASVAATARPAVIVARVGVATQTDAVPVSHDALLESKLNDAMEALLIASSENSSLREVLAEYHGAVDLIMSKHREQMSSLDASHMLRARQLEVELAEQTAARAQAEKMSAALCDRIDEMVHVMAYAAELEERSSAEMTSEVRSLRVENDAMRQLLSIAGIELLPEDVPDVRPRLPERPSNGSLNGTHTFPGQRLIDRADALSDETAA* # ORIGINAL: g12293.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 81 4620 . - . ID=g12293;Name=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 81 4620 . - . ID=g12293.t1;Parent=g12293;Name=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 4540 4620 . - . ID=g12293.t1.exon1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 4540 4620 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 4264 4395 . - . ID=g12293.t1.exon2;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 4264 4395 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 4065 4182 . - . ID=g12293.t1.exon3;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 4065 4182 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 1747 3965 . - . ID=g12293.t1.exon4;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 1747 3965 . - 2 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 1409 1603 . - . ID=g12293.t1.exon5;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 1409 1603 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 1085 1185 . - . ID=g12293.t1.exon6;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 1085 1185 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 731 921 . - . ID=g12293.t1.exon7;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 731 921 . - 1 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 371 534 . - . ID=g12293.t1.exon8;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 371 534 . - 2 ID=cds.g12293.t1;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 81 194 . - . ID=g12293.t1.exon9;Parent=g12293.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 81 194 . - 0 ID=cds.g12293.t1;Parent=g12293.t1 #PROT g12293.t1 g12293 MSDRRDALLSAASNARSGALAEFVGSGADVTEVIQSLSRKQYGVLWTDISAFLSTAQITHEVENGGDERKSIAAGCAGGIRAAAELIKATVTADKPSVTDELVHSVQALHDCLLSLKFDDPVEAAAQNAVAEACEEWWHNESLPAREDIVPQTITYLVARSIAEGSRAGDVKRVAAFRETLKVLAIDDVSCITLRSMLLRCAIHPAHVKSDDGRKFIAQIFALSQSVTAQAHAAVKSQLPSASLGLVDCYADVYFRAWKLLPEGAPIAYFETHCVQDIMFRAVHARSDMRCRLAPLLLRFMATSFHSQKRTRGVDGMLFRLYDPILWRALRVANAAVRANAAALFLDAFPLVEPDATREQTDTLLQRQFDALADLLADEHPAVRAVAARGCARVLNAYWELIPGPAVRVFLERLLGLSFDAASGAVREAVLEGLGFLLDNVLAQEVLVPVLPRLGVHIHDTSDKVRAAFVGLLLKSKGIHAIRFWKIAPLEQILLRLATDSGTVARRIVRLLSNSYFPQDKSPQEQLARCVAMVRANPAAAVKFYSLLRSESSTAAVAKFAGVVVAAIHDAVRRSLSSKTAPVARQAEAGQRLKKGGRKRLASGDPEVDMAEASAPPEGKGDGLSMDEPDIVASAVAIATAILSSVKQYFEKGRYAKAGERTLSAVRALVAPLLAVFPEGQGRLNALKLASLFPPSADGVKGVDSDGLGILARARSVDGHVSRESRLATVDCVFAWGLHNELFETIRGWLGSAFRQTLDASQKRMRKGVRKPAAVVSDDDKDDSTNGVDMLVDSDEEVAVRGKTKRMAKSGRGKENDRVDVNVMDDGVEAKDATAVAQLDTAVLYLAHILATDSHRKIFLSQPETVQSLVDVIFKVHGVIEDAIAGAPCGYTSDSLSATLSVYMAIMVHAHAVSVGEKPVVPPAAELLLDWSELVLVPTVVSAARAPASGVARPTRTAKKLAAAAPVSDPSGLAVSCMEAVASCVGDICTIGMADYATIDRFARMMRPVVSSPSGVPFVKQLLRVAYGAAHMGKETVVADPVIQSILMAVIAKIASAGESDIDTLQKSFSTAVSSLATVYAKKGSMERLSEPLVSMGMDDMRGCQ # PASA_UPDATE: g12294.t1, single gene model update, valid-1, status:[pasa:asmbl_9289,status:3], valid-1 NODE_76_length_43976_cov_42.6929 . gene 5081 9187 . + . ID=g12294;Name=g12294.t1 NODE_76_length_43976_cov_42.6929 . mRNA 5081 9187 . + . ID=g12294.t1;Parent=g12294;Name=g12294.t1 NODE_76_length_43976_cov_42.6929 . five_prime_UTR 5081 5127 . + . ID=g12294.t1.utr5p1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . exon 5081 5271 . + . ID=g12294.t1.exon1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . CDS 5128 5271 . + 0 ID=cds.g12294.t1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . exon 5355 5440 . + . ID=g12294.t1.exon2;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . CDS 5355 5440 . + 0 ID=cds.g12294.t1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . exon 6031 6118 . + . ID=g12294.t1.exon3;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . CDS 6031 6118 . + 1 ID=cds.g12294.t1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . exon 6263 9187 . + . ID=g12294.t1.exon4;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . CDS 6263 9028 . + 0 ID=cds.g12294.t1;Parent=g12294.t1 NODE_76_length_43976_cov_42.6929 . three_prime_UTR 9029 9187 . + . ID=g12294.t1.utr3p1;Parent=g12294.t1 #PROT g12294.t1 g12294 MDVSKDIGDIESILALNPRPNENASLVSTTTTKANRKYWKRNEKKDCGSCNDSLEKNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQLDIKSFITSISNKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGAINIGGLQQFATEVFKRMNIPQIRDPTLPPIESLPESFRAKIALVGCGPASISCATFLARLGYTDVTIFEKEEFIGGLSASEIPQYRLPHDVVDFEITLMKDLGVKVVTGKALGGAGGLSLAQFQKDGYEAVFVGIGLPKPKLIDIFEGLSIKEGFYTSKDFLPLVSKASKPGLCGCKARLPELRGHVVVLGAGDTAFDCATSALRCGARRVTVVFRRGFNNMRAVPEEVDLAREERCEFLPFAAPKKVVVAEGRLRALELCRNEEMDDGKWVEDPEQVIRIKCDYIISAFGSQLGDEAVMEAMQPLKFNSWGLPVVDNDTMRTSEPWVFCGGDLAGQAQTTVESVNDGKQAAWHMHTYLQALHGIPIPKKVSLPIFCTPIDAVDVSVEVCGIKFPNPFGLASAPPTTTSAMIRRAFEVGWGFAVTKTFALDKDSVTNVSPRIVRGTTSGHMWGPGQGSFLNIELISEKSAAYWCKSVTELKRDFPDRVVIASIMCGYVRDDWQELAKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRAAIKIPFFAKLTPNVTDIVEIAMAAHEGGASGATATNTVSGLMGVKSNASAWPAVGAEKKTTYGGVSGNAIRPIALKAVSNIARKLPGFPILATGGIDSAESALQFLHCGASTLQVCSAIQNQDFTVVQDYIHGLKALLYLMSRDDLQREGWDGQSPPTDQHQKGKRVPAIKDLIGKHLPNFGHFAEERAKIVARHKKAAPEVETAGQFVARPAPPPKAAAPSVQDVIGRAVPLIGAYGDLDNKQQVVALVDEEMCINCGKCYMTCNDSGYQAITFDAETHLPHVSDDCTGCTLCVSVCPIIDCITMVPRKIPYVPKRGIPFALTASA* # ORIGINAL: g12296.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 13810 15030 . - . ID=g12296;Name=g12296.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 13810 15030 . - . ID=g12296.t1;Parent=g12296;Name=g12296.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 13810 15030 . - . ID=g12296.t1.exon1;Parent=g12296.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 13810 15030 . - 0 ID=cds.g12296.t1;Parent=g12296.t1 #PROT g12296.t1 g12296 MRAFQALCEGDMTCLSADIGCLVSMVDKLQQVPRAMWAKINMTLSGPNAGVGLMACVGDKMEATGYMDPVTRRPLMITNAVKVLRSALAKFDLRGKFAYGRRGSIKDATEAASRSDDAPRTVAHPPFRVGTPTAPFCDEVTAAEVDAWLVRVEAAGRTGSIPRVECVHCEPDNPKITCHKCVTDAKHRMWAVSRGAYALSSREPRVYYGIFAMYQRPDGSLVHETFKPYSKIEVDTIVRCLSLEDRTPAIFAHPLFIVQDPNMYWPIVHYYGSVRAAFPLAAPNVDWTDRLPVPVPMVSPTHEFDETSPFYKTVAGEIVSRCGNEACFVLEKEGLKFNMCAQCQLRSTAVGSARRQIGRRIVKSARSSRRAMWSSSAPGPPSCYCTSPTSPARPQFKYLSNDYDIE* # ORIGINAL: g12306.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 41777 43190 . + . ID=g12306;Name=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 41777 43190 . + . ID=g12306.t1;Parent=g12306;Name=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 41777 41793 . + . ID=g12306.t1.exon1;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 41777 41793 . + 0 ID=cds.g12306.t1;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 41930 42346 . + . ID=g12306.t1.exon2;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 41930 42346 . + 1 ID=cds.g12306.t1;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 42609 42705 . + . ID=g12306.t1.exon3;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 42609 42705 . + 1 ID=cds.g12306.t1;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 42812 42952 . + . ID=g12306.t1.exon4;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 42812 42952 . + 0 ID=cds.g12306.t1;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 43062 43190 . + . ID=g12306.t1.exon5;Parent=g12306.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 43062 43190 . + 0 ID=cds.g12306.t1;Parent=g12306.t1 #PROT g12306.t1 g12306 MQRSIASFFGKNGSNAAAKPKVIAAVNASENNVDGHAPAEDAMQIVGDGGISLKRAMDAEENNGSPPAKRARVEDTSTKTVPPADATVVPELEAARNGATEVVTEKTAAVMGMQMPTVEQMVSDFCPQSENFHPVKSACWKAGERLKIIDILSNLFRSVIALTPKDLICCIYLCTNKIAPDYSGIELGVGEALLIKAIAEATGRSAAAIKTDAESAGDLGTVAQASRMNQRTMFQPPKLTIAKAFGVLKEIASMQGNSVGPNTSEL* # ORIGINAL: g12301.t1 original gene structure, not modified by PASA NODE_76_length_43976_cov_42.6929 AUGUSTUS gene 26129 28660 . + . ID=g12301;Name=g12301.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS mRNA 26129 28660 . + . ID=g12301.t1;Parent=g12301;Name=g12301.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS exon 26129 28660 . + . ID=g12301.t1.exon1;Parent=g12301.t1 NODE_76_length_43976_cov_42.6929 AUGUSTUS CDS 26129 28660 . + 0 ID=cds.g12301.t1;Parent=g12301.t1 #PROT g12301.t1 g12301 MTQTAGDVAADPPPPVLRREDIIRITLAFLRHYGYTDAMCALEWESGVCAAEHGPELGFLRSLVLAGRWDDALAFVEPLEGIDGVDTRRIRYVLLKHKLLELLARRPIAGNWTAAPHGARPSEVQSVDGIVACLQAIEKECDSKTEFNELCYLLALKHFTDHDSYAGWSVSGSRIDCFDALLPLVATVLNVPDDDVPLKRTYATAGDPNRLVALFMHGMLYEGGKALHCPRMSSAECYDCIVAHCGRNHASYKWLRRSAAVPETSVLSLKKDAMLRQSYSRLPQDPYSGVDGADTRANSKPDEPHTLPAGGTTAAHANASTAGRTLKGSVVGALDALAADLKVDHVRASTNNWSSKEAPIHVPHGVSLASHTNERVRDAAKTAWASKQDSNPDVSSTPMASKRDVGHVTATPAWPLRNDLEDMPPRAIASSARDISRVHGAAQSSKEESGGAAARVEYARASAPNKAVHQKDGRHAATSAKRQSVPPSASVRESAYRPPPVFGVQDTMAAVFTPTYRAVLSVDDAQPIRAVAFDPSGCLFAVGANSRTLRVCATAHGTSVACGPAAVLVKRNKHHKGSIYCVAWSPDSALIATGSNDKTVRVLGFDTAAQRAQGDPIDLAGHDGTVRDVAFCLGPGGGHAVVSGGAGDCALRIFDPITASCVGVLRGHSNHVHGIRALSPWHSTQLAGASVASVAADGTLRLWDVRMRDCAATIRVVDGTSEATGLTSLSVDPVSVNTVATGKATGGVAIVDLTMRRVMHELTPHADECRSVSHSPDGRWIVTGSYDATVRVTRCEGAPRTCIVGYHADKVTQCAWHPSGASLLSAGADKLVKYWEPDMKTDF* # ORIGINAL: g2845.t1 original gene structure, not modified by PASA NODE_6679_length_526_cov_20.4922_potentialcontaminant AUGUSTUS gene 115 328 . - . ID=g2845;Name=g2845.t1 NODE_6679_length_526_cov_20.4922_potentialcontaminant AUGUSTUS mRNA 115 328 . - . ID=g2845.t1;Parent=g2845;Name=g2845.t1 NODE_6679_length_526_cov_20.4922_potentialcontaminant AUGUSTUS exon 115 328 . - . ID=g2845.t1.exon1;Parent=g2845.t1 NODE_6679_length_526_cov_20.4922_potentialcontaminant AUGUSTUS CDS 115 328 . - 0 ID=cds.g2845.t1;Parent=g2845.t1 #PROT g2845.t1 g2845 VRKSLRLVVDNIDERAPTDISYVYSGYAPLSVRLLEALGKTGWRGMDDILRLLPGPAFEELQPLPPGVQPK # ORIGINAL: g11813.t1 original gene structure, not modified by PASA NODE_3670_length_2989_cov_38.8579 AUGUSTUS gene 745 1370 . - . ID=g11813;Name=g11813.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS mRNA 745 1370 . - . ID=g11813.t1;Parent=g11813;Name=g11813.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS exon 1203 1370 . - . ID=g11813.t1.exon1;Parent=g11813.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS CDS 1203 1370 . - 0 ID=cds.g11813.t1;Parent=g11813.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS exon 745 957 . - . ID=g11813.t1.exon2;Parent=g11813.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS CDS 745 957 . - 0 ID=cds.g11813.t1;Parent=g11813.t1 #PROT g11813.t1 g11813 MASPAVGANGPASPAPGPTIPLLDEAKLASLTAEQRAEVVMKWLTRVDDTLKTMQKADAKALQPKLQDALTRMLLSNPGPTERRLVLASLVSLSNASGSMKPYEIVAKCQDFLRARDATSPVPPRL* # ORIGINAL: g11814.t1 original gene structure, not modified by PASA NODE_3670_length_2989_cov_38.8579 AUGUSTUS gene 1976 2642 . + . ID=g11814;Name=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS mRNA 1976 2642 . + . ID=g11814.t1;Parent=g11814;Name=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS exon 1976 2110 . + . ID=g11814.t1.exon1;Parent=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS CDS 1976 2110 . + 0 ID=cds.g11814.t1;Parent=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS exon 2241 2363 . + . ID=g11814.t1.exon2;Parent=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS CDS 2241 2363 . + 0 ID=cds.g11814.t1;Parent=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS exon 2526 2642 . + . ID=g11814.t1.exon3;Parent=g11814.t1 NODE_3670_length_2989_cov_38.8579 AUGUSTUS CDS 2526 2642 . + 0 ID=cds.g11814.t1;Parent=g11814.t1 #PROT g11814.t1 g11814 MSSHNAIPRLPVDAYRTEFLRSLAANACVVVVGETGSGKSTRLPQFLLEEGYAAGGKIIGVTQPRRVAAISVAERVAFERKSNIGEEVGYAVRWDVKCSDATRLKYMTDGVLLREFIDDPSFSR* # ORIGINAL: g6390.t1 original gene structure, not modified by PASA NODE_3322_length_3738_cov_39.4193 AUGUSTUS gene 224 3361 . - . ID=g6390;Name=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS mRNA 224 3361 . - . ID=g6390.t1;Parent=g6390;Name=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 3310 3361 . - . ID=g6390.t1.exon1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 3310 3361 . - 0 ID=cds.g6390.t1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 2682 2906 . - . ID=g6390.t1.exon2;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 2682 2906 . - 2 ID=cds.g6390.t1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 2000 2392 . - . ID=g6390.t1.exon3;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 2000 2392 . - 2 ID=cds.g6390.t1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 1724 1790 . - . ID=g6390.t1.exon4;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 1724 1790 . - 2 ID=cds.g6390.t1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 924 1359 . - . ID=g6390.t1.exon5;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 924 1359 . - 1 ID=cds.g6390.t1;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS exon 224 672 . - . ID=g6390.t1.exon6;Parent=g6390.t1 NODE_3322_length_3738_cov_39.4193 AUGUSTUS CDS 224 672 . - 0 ID=cds.g6390.t1;Parent=g6390.t1 #PROT g6390.t1 g6390 MVVTGTDGSVMDSIATRDPLVYFAPFRNTPRDYRPSWNMLSATVASVVDDDRNKAKTSLPSFTGGSGVRGAVSRALSVGCRFSVTSWLRTSVTFGDINGCKMSICIERTAMPGDDLGVMAYSTVSLTYDCPAIDPVAARFVGPYLSDSTWHHVTVVRDALTVRGFVDGRPAGSVTLDARAVAAVCTPGVLMSNVVVGKGFSGAIDELFILPYALDNVGVANFADITADCSADVYSVVWTVPQLAEMSQPLLLISVESSAKNKASISSQFVIDSSPPVASTVREGNADFDSNYAAPDTPITVYWGPFLEEQSAMIGYEVAYYDSPKACTEAAVSDPTAWVHVGTTLAWSIPSWPKALLDKKLPDLPSARRQMFFIVRGTNTAGLSSVACSNGIILDDSAPTLTVTIDRAWTLDGANKWGSDHASTITFRWVAYDKDGISHVSVSVSGGELGTLNFPRNVGNSLTIPTSGKVLNGQTVKFAIIAYDVSSQTARVDGHVTLDSTPPEVGVEARAGVAQPFNDRSGCNLVVSWLFREDDPQGLA # PASA_UPDATE: g12693.t1, single gene model update, valid-1, status:[pasa:asmbl_10034,status:3], valid-1 NODE_933_length_15757_cov_55.0776 . gene 11590 14201 . + . ID=g12693;Name=g12693.t1 NODE_933_length_15757_cov_55.0776 . mRNA 11590 14201 . + . ID=g12693.t1;Parent=g12693;Name=g12693.t1 NODE_933_length_15757_cov_55.0776 . five_prime_UTR 11590 11696 . + . ID=g12693.t1.utr5p1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 11590 12180 . + . ID=g12693.t1.exon1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 11697 12180 . + 0 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 12294 12408 . + . ID=g12693.t1.exon2;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 12294 12408 . + 2 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 12576 12744 . + . ID=g12693.t1.exon3;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 12576 12744 . + 1 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 12889 13161 . + . ID=g12693.t1.exon4;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 12889 13161 . + 0 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 13342 13582 . + . ID=g12693.t1.exon5;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 13342 13582 . + 0 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . exon 13721 14201 . + . ID=g12693.t1.exon6;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . CDS 13721 13878 . + 2 ID=cds.g12693.t1;Parent=g12693.t1 NODE_933_length_15757_cov_55.0776 . three_prime_UTR 13879 14201 . + . ID=g12693.t1.utr3p1;Parent=g12693.t1 #PROT g12693.t1 g12693 MVPVPHSPAAMVQLGEGDSHAMKSLDDLIARLGNDVTGTMIGSNLAGIQACVDGLRQLMGAVLSEKAVIAVENAHLRDEVVALRNENLRQRSEIESLRNSHRSDAQHQQQQQVHLQQGSSSVGQVDCVGAILSEVSEKARMRPDSKIVLITGAAGFIGFHTALRLVARGDIVVGLDNYNDYYDVQLKKDRAAILADNGIEIIDGDICDMDLVRRILSSAKVTNVIHLAAQAGVRFAVEKPLTYIRSNVQGFVTLLESVRLENQSTGRDIKVAYASSSSVYGLNTKTPFAETDVVDRPASLYGATKKSNEEIAHAYNHVHGLAVTGLRFFTVYGPYGRPDMAIYSFTKDIIAGKTLTVFRNHDGSELLRDFTYVDDIVTGILGAVDLGARCDIFNLGNSAPETVSQFIGHIESSTGKEAKVQYKTVYGGDVSVTYADVTKAKKLLGYVPTTSLSDGVRKFVAWFTEYHGASSSESPRPSL* # ORIGINAL: g12692.t1 original gene structure, not modified by PASA NODE_933_length_15757_cov_55.0776 AUGUSTUS gene 8496 10745 . + . ID=g12692;Name=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS mRNA 8496 10745 . + . ID=g12692.t1;Parent=g12692;Name=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 8496 9003 . + . ID=g12692.t1.exon1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 8496 9003 . + 0 ID=cds.g12692.t1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 9222 9336 . + . ID=g12692.t1.exon2;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 9222 9336 . + 2 ID=cds.g12692.t1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 9454 9622 . + . ID=g12692.t1.exon3;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 9454 9622 . + 1 ID=cds.g12692.t1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 9757 10035 . + . ID=g12692.t1.exon4;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 9757 10035 . + 0 ID=cds.g12692.t1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 10191 10431 . + . ID=g12692.t1.exon5;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 10191 10431 . + 0 ID=cds.g12692.t1;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS exon 10579 10745 . + . ID=g12692.t1.exon6;Parent=g12692.t1 NODE_933_length_15757_cov_55.0776 AUGUSTUS CDS 10579 10745 . + 2 ID=cds.g12692.t1;Parent=g12692.t1 #PROT g12692.t1 g12692 MMAGSAFSDAIDGQSPAVANSVPDQEIDCQGMSVHTWLPSCGVPASTGAVGCAALINDASGSIYSNEQVRALLDDNARLQRENGLQLAEIQALRASRYQMSAESSISREIATCSSRDAPRKPDSVSEEVQNVATILDDVRERAETLLALSPAGKVVLVTGAAGFVGFHTCMQLASRGDVVIGLDNFNDYYDTELKVHRASLLAQKSVSIIRGDICDIDILRQIISECAITHIVHLAAQAGVRYAVENPLAYVRSNVQGFVTMLEAVRHEQQSAASRSPIKVLYASSSSIYGVNKKAPFAETDIVDAPASLYAATKKSNEEIAHAYNHLYGICVTGLRFFTVYGPYGRPDMALYTFTRDILQGKPLTVFRNHDGSELLRDFTYVDDIVTGILGAVDLGARCEIFNLGNSAPETVSQFIGHIESSTGKKAKVQYKTLYGGDVAMTHADISKANCAFGYSPKTSLSDGVRQTVQWYCTTDSPFRLHSDAPKQGTF* # PASA_UPDATE: g12694.t1, single gene model update, valid-1, status:[pasa:asmbl_10032,status:12], valid-1 NODE_933_length_15757_cov_55.0776 . gene 14361 15650 . - . ID=g12694;Name=g12694.t1 NODE_933_length_15757_cov_55.0776 . mRNA 14361 15650 . - . ID=g12694.t1;Parent=g12694;Name=g12694.t1 NODE_933_length_15757_cov_55.0776 . five_prime_UTR 15554 15650 . - . ID=g12694.t1.utr5p1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . exon 15549 15650 . - . ID=g12694.t1.exon1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . CDS 15549 15553 . - 0 ID=cds.g12694.t1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . exon 15249 15411 . - . ID=g12694.t1.exon2;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . CDS 15249 15411 . - 1 ID=cds.g12694.t1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . exon 14922 15034 . - . ID=g12694.t1.exon3;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . CDS 14922 15034 . - 0 ID=cds.g12694.t1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . exon 14361 14704 . - . ID=g12694.t1.exon4;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . CDS 14629 14704 . - 1 ID=cds.g12694.t1;Parent=g12694.t1 NODE_933_length_15757_cov_55.0776 . three_prime_UTR 14361 14628 . - . ID=g12694.t1.utr3p1;Parent=g12694.t1 #PROT g12694.t1 g12694 MHFMLAVNDSKASEQALDDVAVFVPPHKLSIVNCSELPKDGEAAVRTFTKKVGEKKIEAEIVGRAIQHGHSVGEEICEAADDYDVDLIIVGHLAAENIGSVSKYVVKNAQRHILVVRK* # PASA_UPDATE: g12691.t1, single gene model update, valid-1, status:[pasa:asmbl_10031,status:12],[pasa:asmbl_10033,status:12], valid-1 NODE_933_length_15757_cov_55.0776 . gene 68 7816 . + . ID=g12691;Name=g12691.t1 NODE_933_length_15757_cov_55.0776 . mRNA 68 7816 . + . ID=g12691.t1;Parent=g12691;Name=g12691.t1 NODE_933_length_15757_cov_55.0776 . five_prime_UTR 68 69 . + . ID=g12691.t1.utr5p1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 68 358 . + . ID=g12691.t1.exon1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 70 358 . + 0 ID=cds.g12691.t1;Parent=g12691.t1;5_prime_partial=true NODE_933_length_15757_cov_55.0776 . exon 571 861 . + . ID=g12691.t1.exon2;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 571 861 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 1116 3743 . + . ID=g12691.t1.exon3;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 1116 3743 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 4013 4300 . + . ID=g12691.t1.exon4;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 4013 4300 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 4461 4751 . + . ID=g12691.t1.exon5;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 4461 4751 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 4906 5196 . + . ID=g12691.t1.exon6;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 4906 5196 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 5425 5997 . + . ID=g12691.t1.exon7;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 5425 5997 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 6228 6512 . + . ID=g12691.t1.exon8;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 6228 6512 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . exon 6644 7816 . + . ID=g12691.t1.exon9;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . CDS 6644 7518 . + 2 ID=cds.g12691.t1;Parent=g12691.t1 NODE_933_length_15757_cov_55.0776 . three_prime_UTR 7519 7816 . + . ID=g12691.t1.utr3p1;Parent=g12691.t1 #PROT g12691.t1 g12691 VNEAPASLALSAFTIAENTGSRVTVGTLSSTDPDASPVFTYSIRSDTSGGAFVIENANLVAVSPLDYEAAVNQTLSIRVSDQGSLFFDRTFIINVLDVNEAPSGLAINATSIREDAPRGSLVAVMSASDVDARDVLEFSIAGGASASFFSVDGTKLRTAVALDFETASTHNIVLKVTDSGGLSVSKAFTITVVDVNEAPTAISITNDVIAENNSVDAVIGTLSASDPDTAPTLTFSLTDSAGGKFALTGRVLIAKVALDFEATRSLQVTVVVTDNGGLTFTRNITVSVLNVNEAPTSIALSATSIDENGPIGTAVGALTVTDPDANDVPSCALTGTGSVALRLDSGNRIVTTRILDFETTSSYSITITCTDAGSLSKVDTFTVTVKNVNEPPTDVRLSANSITENMPSGTFIGDLTALGDPDAGATFTCKINAPKNGQFDIVANKLRSNASLDYETLWSYTLTIECNDQGGLGVTRDFDVFVVNVNEPPKGIALKDGSLQIEENKPVGTLIGRIQAIGDPEQTDGFSYQINVQPPGDITLIGLVLQTSRSFNFESVGSYNVTVTATDNGGLSVRETLIISVVDVNEPGTSLELSRTSIVENVPYGTVVGNLSVVGDPDIGEAYVFDITFDPEFAFYIDGSQLCVGTGIDYETLAQYSLELRGTDRGGLSITRRYVIMVIDVNETPDDVALRGVDGLVGIPEGMPARSLVASLNTEDPDMYEAFAYNITMTGPAVFSIKDTFVYSSTVFDFEATPFVVVQVTTTDTGSNSLTREFSIPIFDVNEPPTDIKINQTSVREMSPVGTTVGLLSSTDPEGGTFLYSLIANPFGSFAIVQNRLTVARVLDYESGSKSINITIQTSDQYGLTFRKNFTISIVDVNEAPSGCALSNNTISENVPAGAVIGTLSQFGDPDLSEAWTFAVVAPGNDSFAITGGNSLVTVRSFDFETTPLIVFSVQVTDRLGLTAVQQLTVFVTNVNEAPSAVTITPNAVPENTASGYTVGKLLTADPDAGDTFTYVLATNDAGAFTLSGDSVQAVSPFNFEVRSQYSISIRTTDKAGLSVVSVVNISVSDVNEAPTAISLSSSNITENMPRGTLVARLTSVDADANEVFKYQLLSDPTYAFYITGNGLYTNRTIDYEVDALLLISIVSVDRGNLSFTASFNITVNNIVEAPTGLVISSTSVAENLPSGTGVGVVKTVGGDNDMSKITLTLVTNENSAFTLVGTTLATTASFDFENKTRYSVSLTATDQLGQFVTAAFIIAVVDVNEPPRNVSLNNTQINENSAVDAVVGVLSPMGDPDGNETHTFALVSNPGNSFVITGNVLRAAIRLNYEVQKSVSIAVSCVDKGGLTVTRSFSIVVNDMNDASTTMALSSTTIFENAPNGTIVGFLTTADEDVGEVFTYSLITNPTDAFFINGTTLLSNRPFDFETASSYRIVLMSQDHGNSTLTREYVISVLDANEPPVDIKFVGAAIDENCPIGTLVGSLDTVDPDAGDVFTYSMFTNAPIEVKGNRILVSGTIDYEALKGQISMTVTTTDRSGFSMSLPFTVRVNDLPEAGSAIILSNNTISEDTIDEIGNLTVAGDPDMNDSYNFTIVSDPSGCLVIIGDKLMAFKGLDFEKTPSFVVQIKSVDKDGLAVKQALNIYVTDVPEPPLPAKIEPGTVLREAVANSFVGRVLGMDQDAGDSVSCKFDKEFSGGLLKVVDGKVYTTDLIANVSGHTVAMQFTCRDSLNLTSTLNTTITIQTFKQKTCNTNVCLNSGNCSQTVLNDVDNGNPACACSSNYYGAVCEFSVGQSKSGSSSSSGGIGTIVPIVVGCVVGACAVAGAVVYYKRRKGLPSQNKDSTSNRNSVIKEAPVDTIWENDLLRTSSVHERPASIYSASAKGDQTIDALMSLADSHTSTKAAGVKTLPTIVETGVQNLWVASANAKGQNPVYETSA* # ORIGINAL: g2671.t1 original gene structure, not modified by PASA NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS gene 654 1406 . - . ID=g2671;Name=g2671.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS mRNA 654 1406 . - . ID=g2671.t1;Parent=g2671;Name=g2671.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS exon 654 1406 . - . ID=g2671.t1.exon1;Parent=g2671.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS CDS 654 1406 . - 0 ID=cds.g2671.t1;Parent=g2671.t1 #PROT g2671.t1 g2671 MEIAEPALTYNLEDMQKIVRTALGTDKCPAADGMKVVWDALHTMNMDLIDMYANFGMWSRLRKEYVEHFGWSLYDMTSVKMVIAALKERGIRRVVGVCSGLGFLERLLEASGEFSEVIASDVTPQNDAFIRVDLMDAVTAIRTHVHGWTDTALLASWLPEELIESGDHSDKLTKLPLDARIFKSTFAEGGQTVVLVGEGFGGCTGSRIGWKYIENKCHEPLLIETPNFWNIYSCIVVFNRLIGGKLPRGI* # ORIGINAL: g2670.t1 original gene structure, not modified by PASA NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS gene 1 264 . - . ID=g2670;Name=g2670.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS mRNA 1 264 . - . ID=g2670.t1;Parent=g2670;Name=g2670.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS exon 1 264 . - . ID=g2670.t1.exon1;Parent=g2670.t1 NODE_4082_length_2213_cov_39.0449_potentialcontaminant AUGUSTUS CDS 1 264 . - 0 ID=cds.g2670.t1;Parent=g2670.t1 #PROT g2670.t1 g2670 MAAATSTDRNRYVQEAVQLGYITTPYARIRNVTPAGLGDIAYRYGQTLSPLWPNTLAHHNDLRMYLVHTSVLGQKHGVQGAPLVDASV # ORIGINAL: g7667.t1 original gene structure, not modified by PASA NODE_3448_length_3447_cov_33.8618 AUGUSTUS gene 578 3035 . - . ID=g7667;Name=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS mRNA 578 3035 . - . ID=g7667.t1;Parent=g7667;Name=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS exon 2886 3035 . - . ID=g7667.t1.exon1;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS CDS 2886 3035 . - 0 ID=cds.g7667.t1;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS exon 2538 2704 . - . ID=g7667.t1.exon2;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS CDS 2538 2704 . - 0 ID=cds.g7667.t1;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS exon 2175 2277 . - . ID=g7667.t1.exon3;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS CDS 2175 2277 . - 1 ID=cds.g7667.t1;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS exon 1561 1700 . - . ID=g7667.t1.exon4;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS CDS 1561 1700 . - 0 ID=cds.g7667.t1;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS exon 578 1382 . - . ID=g7667.t1.exon5;Parent=g7667.t1 NODE_3448_length_3447_cov_33.8618 AUGUSTUS CDS 578 1382 . - 1 ID=cds.g7667.t1;Parent=g7667.t1 #PROT g7667.t1 g7667 MAVIRDGQMNRKKEFDGDNKPSQDRAWRTVYVVLRGHMLFSYKASAKQVGGSKLEDSVNVRHAYAAVSEHDKRPFVFSVTTLQCARVLYQAKDAEDRECWIGVINRTAARTSAPALPAPVGSLLVFRRPLLPSTPTRYELQDQLRHMTQKAKDFQDELTEHEAMRQTLSESNKAVLAAWEKKLDYLRFEMARYKAYVEELAEEDPDSDKKGDTGDAQKEAVAVHAASLPAVVVDRTSSASVASEAKHSDATVTPEDGAAPDAHPEIASDGALNAADVRLEREAKGTDAVEPADATVTKSTAIQSTVAESVSIQPIRTESGALEAATVTASVASEDAVTVAIESSSVVAMASTVSVAVATTSHAHEAAPAHSHTTASEASAEPAIPTDPPTAAEDHHVTRTDPSPAYVHKKASIADTSSPQSSVPGRVAFYRTSSYLAAIRSAQSSAPFGGSSDC* # PASA_UPDATE: g13532.t1, single gene model update, valid-1, status:[pasa:asmbl_5432,status:12], valid-1 NODE_3021_length_4517_cov_45.8568 . gene 109 4373 . + . ID=g13532;Name=g13532.t1 NODE_3021_length_4517_cov_45.8568 . mRNA 109 4373 . + . ID=g13532.t1;Parent=g13532;Name=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 109 242 . + . ID=g13532.t1.exon1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 109 242 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 464 689 . + . ID=g13532.t1.exon2;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 464 689 . + 1 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 842 1007 . + . ID=g13532.t1.exon3;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 842 1007 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 1203 1390 . + . ID=g13532.t1.exon4;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 1203 1390 . + 2 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 1646 1755 . + . ID=g13532.t1.exon5;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 1646 1755 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 2047 2218 . + . ID=g13532.t1.exon6;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 2047 2218 . + 1 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 2520 2609 . + . ID=g13532.t1.exon7;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 2520 2609 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 2962 3087 . + . ID=g13532.t1.exon8;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 2962 3087 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 3433 3651 . + . ID=g13532.t1.exon9;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 3433 3651 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 3853 4232 . + . ID=g13532.t1.exon10;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 3853 4232 . + 0 ID=cds.g13532.t1;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . exon 4352 4373 . + . ID=g13532.t1.exon11;Parent=g13532.t1 NODE_3021_length_4517_cov_45.8568 . CDS 4352 4373 . + 1 ID=cds.g13532.t1;Parent=g13532.t1 #PROT g13532.t1 g13532 MGDAGNDGDILQLSHKVIGAMIAEPKLVDEVYCQLCKQVTKNPDEESAKNGWLLMALCLGCVPPSKAVGKFMKNFINESDAVFDLGMCDYKSYCAGRLERISKTSRRDFPPNSLEFVAAQNTTEIMLPINFMDGTKKSVNIDSATTAQEMVTKVAEAAQIKESAGFSIYFYTSDSEVIFKSDDHIMDVMSDYEGRAHKKGASAGFRPMFFFKKQSFVHGNSDTLHKDDPIATHLIYQQVVLGVKTELYDLDVEDAAFAAASIHFVSKKGEGKISSQVLQEYLPAKHHKTVSGPIFAKYYVPLTGLQMNTVMWRLIDYAKKFTPHFAFCYEAVLKDHPPIEGLTAKHVIIALDTIGLHICEKQKVLFTKDYNVIRSHIIEPSMTDKANWRVEFNGKVVLVFTMDKSLANYLDRKLTAYMDELKKSPRFAVALQAVESHDPTLLSMKRGEIIFLTTKDAADGWLEGECRGNIGHFQPGQVSMLLCRPLEDPLAGLPTDEEIERDKEKAKNKAEKRSRLRSDAADDEMRGRVGSFTGDVEMDGTPADDVTGDLDNRHSMLTYAQSHFREAQESSKRRSGMGGTIARTFSRKKTELDWGWGSLASMIKIRGRNY* # ORIGINAL: g2281.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 21540 21893 . + . ID=g2281;Name=g2281.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 21540 21893 . + . ID=g2281.t1;Parent=g2281;Name=g2281.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 21540 21893 . + . ID=g2281.t1.exon1;Parent=g2281.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 21540 21893 . + 0 ID=cds.g2281.t1;Parent=g2281.t1 #PROT g2281.t1 g2281 MSEQVKHAKVVFLVPTTQDNEPVALSFTPNEFLHEVIRLRLNGFGLFDMPEVDNNNIKAVVILGSIHGGESSWNKLLNQIAPNGTPVFFGMSDYERVFPPNFGQAWTGARSTTAANI* # ORIGINAL: g2280.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 14178 16116 . - . ID=g2280;Name=g2280.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 14178 16116 . - . ID=g2280.t1;Parent=g2280;Name=g2280.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 15749 16116 . - . ID=g2280.t1.exon1;Parent=g2280.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 15749 16116 . - 0 ID=cds.g2280.t1;Parent=g2280.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 14178 15348 . - . ID=g2280.t1.exon2;Parent=g2280.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 14178 15348 . - 1 ID=cds.g2280.t1;Parent=g2280.t1 #PROT g2280.t1 g2280 MVSILGDCGRVVFETWFVGSVAFSSDGQTIATGSLDSTVRLWNSATSLCRLTLRGHTGLVLSIAFSPNGRTLVSGSEDTTVRVWNTVTGEFLFALIDTIWAFSVAFSPDGQTIATEGNSLARLGHTAQVKSVAFSSDGQTIATGSLDSTARLWDTETAQCRNILRGHAGLVESVMFLPDGRTIATVANMTVRLWNIATETAHPEPSNENRALSPKQTETTEKQTTTETANLDSVTVRALLSLCGVDSLRDSCTKFLVSETVGAHIIDDIDNDTDDEKDVNDEKDVNDEKDVNDEKDVNNEKDVNNTDVEEDVNDTKDKEDVNDTDDEEDVNDTDDEKVDDTDDEKEVDDTDDEEDVNDTDDEADVNDTDDEKVDDTDDEKVDDTDDEEDVDDTDNEEVVNDWNDVNDDEEDVNDDEEDVNDDEKDVNDDEEVDDTDDEDDVNNTDDEKVADTDDEKVADTDDEEDVNNTDDEADVNDDEDVDSEGKGNAPVCPNEQDPPLKRRRLDVAYPRV* # ORIGINAL: g2279.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 6020 12181 . - . ID=g2279;Name=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 6020 12181 . - . ID=g2279.t1;Parent=g2279;Name=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 7970 12181 . - . ID=g2279.t1.exon1;Parent=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 7970 12181 . - 0 ID=cds.g2279.t1;Parent=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 7556 7641 . - . ID=g2279.t1.exon2;Parent=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 7556 7641 . - 0 ID=cds.g2279.t1;Parent=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 6020 7400 . - . ID=g2279.t1.exon3;Parent=g2279.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 6020 7400 . - 1 ID=cds.g2279.t1;Parent=g2279.t1 #PROT g2279.t1 g2279 MRTLVRALEGVDANEAVALLASEDGGKRLDEFTSCPFVAQPYTESAYSFVGVIVPLLLIVVDNKFRQTALATSLQKVWPRLSYAEFITKAVDCACTDGLQPTSSWAREDCERWDICGKGEGLAGLVAHFILTLLRYERDVQADTQFEGWIKRIERRAPGSPWVASLRAIVDEANKKSSQKSAAAAAAAAATALRTKRATHASPPPGGRHDNDHRDFRATRIEPTQEEILTHARPYLPRADEDIPHATSDVGALLERHARLMREDMVVPLRRGVRAFLNVAAAPFKKALGSERVKVNACKDDELFGGRGGGQHEMGITALRHARFEGIVADKRKGPIVLISFDQMTSLSAKGKRERVDFWREHGLTPDSLVCIAANVRFNSEDGLTGLVFATVCAPPITAHDDNKWEALYGGDRCCIHVTPLDLMRDVSRLIALSETTVRGAENFVLQIQGHFYAGYKYVLDVLQNPLTETCPMLHTLASADTGMHMPQTDPLGSPEFFPYGTRVGISALLKDDAPAGTAKDVTINSYDGVREQLRAMLPVIRIDGTQVDAVAAILTRKIALIQGPPGTGKTHVGAIATKIILDHSLRMRAGVHMHRGAANAAIAVAPTPILCICFTNHALDQYLEALHVREGVPLKDIVRIGGRSRSELLAPRNLFTLERESFSNTTSGERARYAKLSRAMDVLAKDIEEHELMATLQLETASWDCVSEVFSVVDPVNHARINGRDGDFVAVGDVNKRWKKWVQGWVPKTTAAHAERQREVIRERVNQFSAIGESADNSGDGASSDGDAAATEDRFGQLWIVPVAERRRTAMACIETIRQAAIDQLAAALSEYQEKSNELAELRNASSVRILSKATVIGMTTSGCAKHANILQALEPPVVLCEEAGEVLESHVIASLSYGTKQLILIGDHKQLRPKVEYELSVESKRGYDLDVSLFERLVRIGEQETAASKDNDGGSSDVDAEDSVVGAETQARGAWHVTLDSQYRMRPEIANLIRSTLYPTLCNGDNVTSYPDARGFGRNLLFFDHDTPESKGGGAGLRSPKSYTNEFEAEMVVQLIRYAVKQGYKPDDIAVLATYTGQLLVLREKLTRERMLVRLSDGDAEELGLGLFDGEESTTNTDIGNRDNTRSSGAMGGSGGAGKQGKANDKAGQSKVDDGGPTAVSLRECVRLSTVDNFQGEEALLVFVSTVRCNDEGQIGFLKTSNRVNVMLSRAKHAMFVLGSSRTVDKRQGESMFKGVLQLMRDGNAVVRSIPLRCDNHQTITEVSTPTQIRSFCKDGGCTLSCNARMKCGHKCALTCHPDNRDHDPAGVCKETCTRLLQLCQHPCPKLCGQKCPTKCNKIEKRTLSCGHTKDAKCHEDVTTLKCDLLVDVTFPACGHAGKLKCCLRGEFEELCEAIADGNRATSNAVSRAHPVPKPSVRGRAHRIIREVAGYDNGNCVVEFITSTTLAEHNTGKDPPLVILACNHAFTTAHLDLQLGMNMFYGRDDTEKWISAKNISAISDNELDDLAKRATCPLCRVPISGVLRYGRPLKAIDMRRAGILFLRKAQLTAAAHEKEAQFVRAQVDVDGTHVTGDSGDMKKAQKIALFMDKTLQQCINDAAASERNSPPQRVYELEVIASQRVGAAPSLRVAPLWQPVCRLYMAALRCATASLAISGVVAKRVSIVAADPVAHIPSRTAGKPDATDLTAATNAVKKAYTALVDMSVEHSRVSRESGARVECERGLLVAAEGHLVMAEIASQVASLQGEYMRRALADAKSVLADVGNASLLEARDELNRMLERIGKAKASLTIEEKRAVFAAMSGMGGYGVGSFGGHWKSCPNGHVYYVDACGGAMQQSTCPDCGAVIGGDNHTLVVGNSIATQFLADVGGELPPPNWEVNANMIAHDIHGFF* # ORIGINAL: g2278.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 2797 4398 . - . ID=g2278;Name=g2278.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 2797 4398 . - . ID=g2278.t1;Parent=g2278;Name=g2278.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 2797 4398 . - . ID=g2278.t1.exon1;Parent=g2278.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 2797 4398 . - 0 ID=cds.g2278.t1;Parent=g2278.t1 #PROT g2278.t1 g2278 MDNNDIIARDGDAPGGNVRDEDACDGVARDGVAPDADAREADAVDSAAFEMPTPVLPIPVLPLPVLSTSLLAVAGIKSALDVGDAAAAGMGASAAVSTSLPLPSTSDVPKRTGRNTGKQRATDTVPSRSRATVGTPFATADIAGPSATGMERGNQPIANSDRYIQCNIEGCRKGRFRANYHGIRYHYSSACSAKLTNPEINDLRIAHGIPVLPTKPGRPADVDNVADDEHNDGCEGCDDSYTEANEEHKDECHSEGYEEGHSEGYKEGYSEGYEEGHNEGYEEGRSEGYNEGHSEGYNDGNREGNTDGHREGHNGGHVTDKDTDQPADNQDNNEASGESDRDAPCDTSSSRDNTTEQRKVGFVYVLSGSVGSEVKVGRAKDAFQRFRTAQTYNPHLRVDGIFWTLDCVRAEALAHDALVRNGSARVRFANVWATGGRESEWFRCGVSDACKYVREACELISREVALASVGEQRRRLVVRNARWIYAFNAILPFQTSRAWADMREPRWHPRDATNEGAQNRLREVCSVIGLQFA* # ORIGINAL: g2282.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 24423 24911 . + . ID=g2282;Name=g2282.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 24423 24911 . + . ID=g2282.t1;Parent=g2282;Name=g2282.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 24423 24911 . + . ID=g2282.t1.exon1;Parent=g2282.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 24423 24911 . + 0 ID=cds.g2282.t1;Parent=g2282.t1 #PROT g2282.t1 g2282 MFPIKRKQPTPAARPPTIKLVKPVKTPELTRFLPAVSSTWSERDWMIYAVEHGGADVQFAVGKCHEEGHGTIRDCEEALKWFHKAASYGFSAAEFAIGRCYFEGSGVAKDEQEAIVWFNKAKRKGYTLVLHSDASGMTLADWLRIAAERATPEIHVGIAKCCL # ORIGINAL: g2277.t1 original gene structure, not modified by PASA NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS gene 146 1009 . - . ID=g2277;Name=g2277.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS mRNA 146 1009 . - . ID=g2277.t1;Parent=g2277;Name=g2277.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS exon 146 1009 . - . ID=g2277.t1.exon1;Parent=g2277.t1 NODE_393_length_24911_cov_26.2384_potentialcontaminant AUGUSTUS CDS 146 1009 . - 0 ID=cds.g2277.t1;Parent=g2277.t1 #PROT g2277.t1 g2277 MDADEADVGCDMDVNQRLHETASIVAKVTASLATKLQSIASHTTIVRAATKKMCVFIYTRFVYAKAVQRQAQLATSLNVRIICVESRERGNVINECVAPGCANELRAIVNGHGSELFDRHSNLEALAATGRDVAAFVRTKGIIPTDDDRLPKYFHGRRLRVFQTHGQPLPVRIHPTRARWPLALRWLEPTKRTALGRLAVLYRGTVATTTCAHVIFQEEQLNLTSIESAKRVCHALEKAGADVIYPSILSLNEGACVRQRVVFRASPVPTEHRAYTSSRLQLRYFPD* # PASA_UPDATE: g9142.t1, single gene model update, valid-1, status:[pasa:asmbl_960,status:3], valid-1 NODE_1252_length_12747_cov_41.4486 . gene 3433 6897 . + . ID=g9142;Name=g9142.t1 NODE_1252_length_12747_cov_41.4486 . mRNA 3433 6897 . + . ID=g9142.t1;Parent=g9142;Name=g9142.t1 NODE_1252_length_12747_cov_41.4486 . five_prime_UTR 3433 3479 . + . ID=g9142.t1.utr5p1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 3433 3483 . + . ID=g9142.t1.exon1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 3480 3483 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 3745 4187 . + . ID=g9142.t1.exon2;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 3745 4187 . + 2 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 4433 4678 . + . ID=g9142.t1.exon3;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 4433 4678 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 4901 5074 . + . ID=g9142.t1.exon4;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 4901 5074 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 5249 5577 . + . ID=g9142.t1.exon5;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 5249 5577 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 5760 5964 . + . ID=g9142.t1.exon6;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 5760 5964 . + 1 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 6139 6417 . + . ID=g9142.t1.exon7;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 6139 6417 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . exon 6603 6897 . + . ID=g9142.t1.exon8;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . CDS 6603 6815 . + 0 ID=cds.g9142.t1;Parent=g9142.t1 NODE_1252_length_12747_cov_41.4486 . three_prime_UTR 6816 6897 . + . ID=g9142.t1.utr3p1;Parent=g9142.t1 #PROT g9142.t1 g9142 MAFVSSRLVGVVALLAFLATASAISDVFGPSDVARATALFRGAQKVDGSYADLASAHHAAAGLKAIGGTVANVNGACTYLKSTAASTAADAFHAASAFAALACGAGFNAQSETALRNALTAASDSDVAYGVLGLKAVGATFDAAPAINKLSKVSEPAQTLRASLAFAAVAAGSADATVLRHVAEYAEDVLAQGEESERSIAFGEGLASTAAFVRGVYALAAARKAAPVVNEPQANKLASYLLQSKYFDNAADAYETVSALAVFAQNEFHVPISIIPVQTTVTTSKPDVKVSATNVLGGALSGVAVILTKAVDGDGAQLATNRGFGPVAGQPSVYGLNLHSLKPHRGAYSVDVSAKSTGSKHIIQATSSFTVKVAGGATIVDAEIAVQDKHSNLAPKGQKIPYPDRLAAQLNADEHQRIVIRLRVRDPESGEAFAAQQIFVRFVSADGKQEAVYPTETASTGISSVTVDVTALSDRLGGVSGEYTAEIIVGDAVLDAPISFTAASIALRAATPATAAAPAHFGPKPVITHLFREPEKRPPAVVSLAFTAIVLSPFLVLLVLWGALGANISNFSFSLYSLAFHGGIGAILAILALFWLQLTIFETLGYLAVAGVVTFLAGNKALNEHAQKRL* # PASA_UPDATE: g9141.t1, single gene model update, valid-1, status:[pasa:asmbl_957,status:3], valid-1 NODE_1252_length_12747_cov_41.4486 . gene 454 2884 . - . ID=g9141;Name=g9141.t1 NODE_1252_length_12747_cov_41.4486 . mRNA 454 2884 . - . ID=g9141.t1;Parent=g9141;Name=g9141.t1 NODE_1252_length_12747_cov_41.4486 . five_prime_UTR 2605 2884 . - . ID=g9141.t1.utr5p1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 2352 2884 . - . ID=g9141.t1.exon1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 2352 2604 . - 0 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 2110 2240 . - . ID=g9141.t1.exon2;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 2110 2240 . - 2 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 1773 1943 . - . ID=g9141.t1.exon3;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 1773 1943 . - 0 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 1328 1579 . - . ID=g9141.t1.exon4;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 1328 1579 . - 0 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 937 1129 . - . ID=g9141.t1.exon5;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 937 1129 . - 0 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . exon 454 818 . - . ID=g9141.t1.exon6;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . CDS 601 818 . - 2 ID=cds.g9141.t1;Parent=g9141.t1 NODE_1252_length_12747_cov_41.4486 . three_prime_UTR 454 600 . - . ID=g9141.t1.utr3p1;Parent=g9141.t1 #PROT g9141.t1 g9141 MSASTGTPAGSGPSRPLSMAAWAVRNIGGVRSTSSSSSASSSASNGPNRPRLGRAAGVGLGFAAIGLTSVGAGYYFVGPTFAREALEVVKSPPPESIKTVKYLIAGGIAGAVSRTVVSPLERLKILFQIQTGTGAAVQYNGVVPALSKILREEGTIGFFKGNGTNVIRMVPYSAVQFASYEQYKKLMLLLPPEVEELTTLRRLLAGAMAGVTSVIVTYPLDLIRTRLSAQGEGSSRKYTGIAHAYRTILKEEGGWMSGSLYRGLSPTLMGVAPYVALNFTCYELLKKEILELGIGLANPGPRVPLKRGETRGEELNVPTRLMCGALAGAIAQTATYPLDLVRRRMQMKGCSVDFTYTSTLDAFRTIFKREGIVGLYKGMMPNYLKVAPSISISFVTYEFVKKMLI* # PASA_UPDATE: g9143.t1, single gene model update, valid-1, status:[pasa:asmbl_961,status:12], valid-1 NODE_1252_length_12747_cov_41.4486 . gene 7202 9660 . + . ID=g9143;Name=g9143.t1 NODE_1252_length_12747_cov_41.4486 . mRNA 7202 9660 . + . ID=g9143.t1;Parent=g9143;Name=g9143.t1 NODE_1252_length_12747_cov_41.4486 . five_prime_UTR 7202 7206 . + . ID=g9143.t1.utr5p1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . exon 7202 7673 . + . ID=g9143.t1.exon1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . CDS 7207 7673 . + 0 ID=cds.g9143.t1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . exon 7854 8000 . + . ID=g9143.t1.exon2;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . CDS 7854 8000 . + 1 ID=cds.g9143.t1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . exon 8262 8869 . + . ID=g9143.t1.exon3;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . CDS 8262 8869 . + 1 ID=cds.g9143.t1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . exon 9072 9660 . + . ID=g9143.t1.exon4;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . CDS 9072 9187 . + 2 ID=cds.g9143.t1;Parent=g9143.t1 NODE_1252_length_12747_cov_41.4486 . three_prime_UTR 9188 9660 . + . ID=g9143.t1.utr3p1;Parent=g9143.t1 #PROT g9143.t1 g9143 MNSEGAEGGGGGMRGSEFDYRKDVNHERDAHQNASTERPLYERDRDYSRVEYEERRGSHRDERRDYGRRGHERLDERHRREGDGADRGRHSAYTQHVKAQPNARGDEQARHPHGAVQHATAAVVASHYNARQDLGLAARETSAILHLRNFNNWTKSVLLHNYLPEAASVLDMCCGKGGDLQKYRISRIRSLMGFDIAANSIDDCRQRYEGTGRGRLPFNGRFYVADCFGVDLFTPEYDADARNAREFDIVCCQFALHYAFESEARVETALRNASARLRPGCHFVGTVTCAEVLLDRARKAEEATGTGAFANSICSVRFERVPPVDEPASFGVKYFFRLEDAIDDCPEYVASLDLLQRVGRKYGMTLLRERCENFADFAARERRSQWAQQLWQRMNVDPLSDAEKEVTSFYRVFVFRKDDVALHPIAAPAAPAAPAQAPRPNVSWD* # PASA_UPDATE: g9144.t1, single gene model update, valid-1, status:[pasa:asmbl_959,status:3], valid-1 NODE_1252_length_12747_cov_41.4486 . gene 11006 12211 . + . ID=g9144;Name=g9144.t1 NODE_1252_length_12747_cov_41.4486 . mRNA 11006 12211 . + . ID=g9144.t1;Parent=g9144;Name=g9144.t1 NODE_1252_length_12747_cov_41.4486 . five_prime_UTR 11006 11073 . + . ID=g9144.t1.utr5p1;Parent=g9144.t1 NODE_1252_length_12747_cov_41.4486 . exon 11006 12211 . + . ID=g9144.t1.exon1;Parent=g9144.t1 NODE_1252_length_12747_cov_41.4486 . CDS 11074 12096 . + 0 ID=cds.g9144.t1;Parent=g9144.t1 NODE_1252_length_12747_cov_41.4486 . three_prime_UTR 12097 12211 . + . ID=g9144.t1.utr3p1;Parent=g9144.t1 #PROT g9144.t1 g9144 MRLSRVAVVLLAAAAVAFALAEAKIAPRNKRMTTHDTIVAHTPRAHQNVRPIVGMLLQPTTQEQVFAPFGNSYLPASYVKWVESAGARVVPIPFNATDDELIYLFNGINGLLWPGGNTDVDAASVYQQRSKFLYDLAVKANAVGDFFPIWGTCLGFEQLSLITSGDEAILGDFDADNATWPLHFTPEAAASRMFGAATPSVIAAFEREAICENLHEHGVVPEKYATNANLASTYRVLAVNRDRNGQPFVSAIEGIALPFYATQFHPERNAFEWDPEEPIKHSASAVVAMQHLANFFVGETRKNLHSFGSEAEAQSLLIYRHPPMDTAAFNEFYEESYIFK* # ORIGINAL: g6844.t1 original gene structure, not modified by PASA NODE_3665_length_2996_cov_33.3009 AUGUSTUS gene 103 2874 . - . ID=g6844;Name=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS mRNA 103 2874 . - . ID=g6844.t1;Parent=g6844;Name=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS exon 1687 2874 . - . ID=g6844.t1.exon1;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS CDS 1687 2874 . - 0 ID=cds.g6844.t1;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS exon 1255 1347 . - . ID=g6844.t1.exon2;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS CDS 1255 1347 . - 0 ID=cds.g6844.t1;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS exon 422 1117 . - . ID=g6844.t1.exon3;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS CDS 422 1117 . - 0 ID=cds.g6844.t1;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS exon 103 177 . - . ID=g6844.t1.exon4;Parent=g6844.t1 NODE_3665_length_2996_cov_33.3009 AUGUSTUS CDS 103 177 . - 0 ID=cds.g6844.t1;Parent=g6844.t1 #PROT g6844.t1 g6844 MLAVGTCYFQLTQRHALPHQQDVSPVTDFSVRGATVTAKGDHKKRTNVFTIALVDGVVYYVQASSRAEMDAWADAMKKAASLGGPTQGTSAPAASSSSTIGRASANKWKTTAAAAVAVNAFMGTSGAGTAPARRTGPVGDAIPEDATAPRGSVAQRKRSDDSASGAAGDDEAGKLKEVRMGFFHLIGEDLECPLGGDILPDLSFDVVADSGARYSMLLTTTADWKGWLSALRSLVRKRRLVDAAMLTVADAESNIATRKRVHDAYGDTGNPVPEVVRLDVERAQRILSIVKAGEPVPPETPLETSIAAAFVDDHHGLFRMLLYALLEREAETEELSEGATLVLESYGVFYGVMETYRRLLLVDALARQYNLECHRKSARNVRYLPVLAELLSGFGQLVETSRMGLSLLEKAIYDDVLSLLETLQIEQVSAYKDWFPYAKGGIEATLRLLNVVVESEYYRVKTKRAPNPMAELLFVCADKATAARYERIQKMTEDLIASLPSSTGQPQQQQQQQQQQQQQQQQQQTSPQAGASEVKSPLQLMKMVQFVGEELAEDAEYFRMPFSPFVDIVANATSEYANALLRDVRKCVASAAYGDTEKIDLYLRVRRLVDGPLREARNAKTPANVDALVSAFEPSIRGWLLSTGKQLREWTRRALRDDTFVIVENTSGVLHSASVVDVFCCFNQ # ORIGINAL: g14200.t1 original gene structure, not modified by PASA NODE_2303_length_6799_cov_26.7493 AUGUSTUS gene 1179 2213 . - . ID=g14200;Name=g14200.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS mRNA 1179 2213 . - . ID=g14200.t1;Parent=g14200;Name=g14200.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS exon 2121 2213 . - . ID=g14200.t1.exon1;Parent=g14200.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS CDS 2121 2213 . - 0 ID=cds.g14200.t1;Parent=g14200.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS exon 1179 1988 . - . ID=g14200.t1.exon2;Parent=g14200.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS CDS 1179 1988 . - 0 ID=cds.g14200.t1;Parent=g14200.t1 #PROT g14200.t1 g14200 MLPFQLQFAPFSAAHFSAAPFSNTVDRISLKVVPFDDFIVNDPEEILVKDGQRTTLKGLRSIASATKVGKYLEVQLIKGDSIIGGYEIEPHLYVHLTQDNVNTATGSRQSEHCSLFYIESALCIPLLRQYISGCDPKPFEIQKILTTMNQLSRIHVVSRHFGKSYLRSIMQSTDHYNDTLGTLTTRITKLLAFEYAETPLYVRITGGETSNDYTDRPYLFAMFEAGAVDENLPRVFWDCVRCYGQGEFVVDSSANIIYTVGSTQEDAVNIRLVLSLVDVSVDEQPRFAMDDKSTFEISLF* # ORIGINAL: g14199.t1 original gene structure, not modified by PASA NODE_2303_length_6799_cov_26.7493 AUGUSTUS gene 73 573 . + . ID=g14199;Name=g14199.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS mRNA 73 573 . + . ID=g14199.t1;Parent=g14199;Name=g14199.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS exon 73 573 . + . ID=g14199.t1.exon1;Parent=g14199.t1 NODE_2303_length_6799_cov_26.7493 AUGUSTUS CDS 73 573 . + 0 ID=cds.g14199.t1;Parent=g14199.t1 #PROT g14199.t1 g14199 MVKTADKNKPKRGMSAYMFFANDKRTEVGKANPELKMTEIAKILGQEWKKVTDKDKERYEVMAQADKARYEKEMKSYVPPPAGSDEGSKRKKKKVKDPNAPKRPSSAYIFFTQDKRKEIKEENPDASVTEITTLMGKAWHELTEEDKKPYAKKAAADKARYEAEKA* # ORIGINAL: g3097.t1 original gene structure, not modified by PASA NODE_8552_length_366_cov_65.2784_potentialcontaminant AUGUSTUS gene 2 258 . + . ID=g3097;Name=g3097.t1 NODE_8552_length_366_cov_65.2784_potentialcontaminant AUGUSTUS mRNA 2 258 . + . ID=g3097.t1;Parent=g3097;Name=g3097.t1 NODE_8552_length_366_cov_65.2784_potentialcontaminant AUGUSTUS exon 2 258 . + . ID=g3097.t1.exon1;Parent=g3097.t1 NODE_8552_length_366_cov_65.2784_potentialcontaminant AUGUSTUS CDS 2 258 . + 2 ID=cds.g3097.t1;Parent=g3097.t1 #PROT g3097.t1 g3097 RANDLAKLENSLANDVERRKQVEHEKSQLRDEKNKLRDQQSQLRDRQNKLSDQQLLLLQHASGKYMHYSFDVTLFDLLMLSLSS* # PASA_UPDATE: g8054.t1, single gene model update, valid-1, status:[pasa:asmbl_5587,status:12],[pasa:asmbl_5589,status:12], valid-1 NODE_3114_length_4269_cov_40.4158 . gene 141 2181 . + . ID=g8054;Name=g8054.t1 NODE_3114_length_4269_cov_40.4158 . mRNA 141 2181 . + . ID=g8054.t1;Parent=g8054;Name=g8054.t1 NODE_3114_length_4269_cov_40.4158 . five_prime_UTR 141 141 . + . ID=g8054.t1.utr5p1;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . exon 141 214 . + . ID=g8054.t1.exon1;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . CDS 142 214 . + 0 ID=cds.g8054.t1;Parent=g8054.t1;5_prime_partial=true NODE_3114_length_4269_cov_40.4158 . exon 508 587 . + . ID=g8054.t1.exon2;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . CDS 508 587 . + 2 ID=cds.g8054.t1;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . exon 1007 1216 . + . ID=g8054.t1.exon3;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . CDS 1007 1216 . + 0 ID=cds.g8054.t1;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . exon 1573 2181 . + . ID=g8054.t1.exon4;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . CDS 1573 1824 . + 0 ID=cds.g8054.t1;Parent=g8054.t1 NODE_3114_length_4269_cov_40.4158 . three_prime_UTR 1825 2181 . + . ID=g8054.t1.utr3p1;Parent=g8054.t1 #PROT g8054.t1 g8054 YPDRIVLLRGNHESRQITQVYGFYDECQAKYGNPNAWKYCTKVFDFLTVAAVVDGSVLCVHGGLSPEVRTLDQIRTIERDQEIPHEGAFCDLMWSDPEDIEGWALSPRGAGWLFGSKVTTEFVQLNALELVCRAHQLVQEGYKYMFPAEDLVTVWSAPNYCYRCGNVASILKLDENRKRDFLIFNAVPDSERLVPPRVLTPYFL* # PASA_UPDATE: g8055.t1, single gene model update, valid-1, status:[pasa:asmbl_5588,status:3], valid-1 NODE_3114_length_4269_cov_40.4158 . gene 2654 3888 . - . ID=g8055;Name=g8055.t1 NODE_3114_length_4269_cov_40.4158 . mRNA 2654 3888 . - . ID=g8055.t1;Parent=g8055;Name=g8055.t1 NODE_3114_length_4269_cov_40.4158 . five_prime_UTR 3860 3888 . - . ID=g8055.t1.utr5p1;Parent=g8055.t1 NODE_3114_length_4269_cov_40.4158 . exon 3787 3888 . - . ID=g8055.t1.exon1;Parent=g8055.t1 NODE_3114_length_4269_cov_40.4158 . CDS 3787 3859 . - 0 ID=cds.g8055.t1;Parent=g8055.t1 NODE_3114_length_4269_cov_40.4158 . exon 2654 3510 . - . ID=g8055.t1.exon2;Parent=g8055.t1 NODE_3114_length_4269_cov_40.4158 . CDS 2801 3510 . - 2 ID=cds.g8055.t1;Parent=g8055.t1 NODE_3114_length_4269_cov_40.4158 . three_prime_UTR 2654 2800 . - . ID=g8055.t1.utr3p1;Parent=g8055.t1 #PROT g8055.t1 g8055 MCVDVLITFGLSAVPPDMDETPLTEYLRRRLRGEQGETKTPSPRVYTREQIITFHEHNLVDLCLAWGTLPLVTEGSDDPVESLTETREAMAEFMAEIYEKERKRKAGIKPKDAQQASFQSASSSPAPAPSASIPMTQAAARALATTPHVVATDNAKKSANKAAPPPSVLPARGKRTSPAAVASPAVVASSAPPAASTAQASKAAVPGPSASAVTKACAVCGLSGVRLSRCGRCVAVYYCGKEHQAEHWPQHKTSCRKPDA* # ORIGINAL: g2084.t1 original gene structure, not modified by PASA NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS gene 259 714 . + . ID=g2084;Name=g2084.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS mRNA 259 714 . + . ID=g2084.t1;Parent=g2084;Name=g2084.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS exon 259 714 . + . ID=g2084.t1.exon1;Parent=g2084.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS CDS 259 714 . + 0 ID=cds.g2084.t1;Parent=g2084.t1 #PROT g2084.t1 g2084 MEKYGVASSTTCMAGPVSGEDEGATAATTTDEGATAATTTGEDVTAATTTGEDVTAATITGAKGATAATPTGEGVTAVTTIGECATAVTTIGKSVTVATTAGECVTAATTTGKGATAATTTGEGATAATTTGEGATAATAAGEGDEDTGGG* # ORIGINAL: g2085.t1 original gene structure, not modified by PASA NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS gene 839 1339 . + . ID=g2085;Name=g2085.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS mRNA 839 1339 . + . ID=g2085.t1;Parent=g2085;Name=g2085.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS exon 839 1339 . + . ID=g2085.t1.exon1;Parent=g2085.t1 NODE_4143_length_2127_cov_48.1793_potentialcontaminant AUGUSTUS CDS 839 1339 . + 0 ID=cds.g2085.t1;Parent=g2085.t1 #PROT g2085.t1 g2085 MSAAACRAFDTKFLVPNPHLLKSIPQLQKHYMSAPSIALHGAVVHLIDYELFYHDIMPTRGLKCICGALLHRNGYADGFRAERTFLGSTPCFFKYVTYKCPGNCSLAKGPSLQPGSSQPSQPTSTHYTALDPLIVEQLPPIVCELVPFVVTSRSIIPVATVESVLP* # ORIGINAL: g11412.t1 original gene structure, not modified by PASA NODE_3775_length_2782_cov_31.9346 AUGUSTUS gene 191 2606 . - . ID=g11412;Name=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS mRNA 191 2606 . - . ID=g11412.t1;Parent=g11412;Name=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 2415 2606 . - . ID=g11412.t1.exon1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 2415 2606 . - 1 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 1896 1993 . - . ID=g11412.t1.exon2;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 1896 1993 . - 1 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 1601 1722 . - . ID=g11412.t1.exon3;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 1601 1722 . - 2 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 1203 1415 . - . ID=g11412.t1.exon4;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 1203 1415 . - 0 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 919 974 . - . ID=g11412.t1.exon5;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 919 974 . - 0 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 468 740 . - . ID=g11412.t1.exon6;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 468 740 . - 1 ID=cds.g11412.t1;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS exon 191 249 . - . ID=g11412.t1.exon7;Parent=g11412.t1 NODE_3775_length_2782_cov_31.9346 AUGUSTUS CDS 191 249 . - 1 ID=cds.g11412.t1;Parent=g11412.t1 #PROT g11412.t1 g11412 YLQRASGVTPKDPSIHHSLGTTLHRLGKYDEALESFRVAAAIDSAFQIPEVLLGDIETRTRAKKLYTSAETKASKGNVAGAIQDLTKAVTAFQSHEDSHLMLGRLYEFQCGLSFEAVEDVYPEWLDKFSQVNRHPCQVLFLEGQRRLRTQLYREARVLLQEAICRAYHGDFINEFHDLCYEFKEALSREGIDLDLADCGIDGVSQGCQLGLAEECNISGVAFELSGRYDRARGCYQLALGLDPEHKGALHNTARLKRRTENLRLALKHFGEAAKHGSMQGRVSWSKLLVRLGRLSEARQVLEGVDRRHKMWEVLQRQRSYVMRELRHFMEVVGDGAA # PASA_UPDATE: g11045.t1, single gene model update, valid-1, status:[pasa:asmbl_5692,status:12], valid-1 NODE_3190_length_4054_cov_34.1834 . gene 234 3881 . - . ID=g11045;Name=g11045.t1 NODE_3190_length_4054_cov_34.1834 . mRNA 234 3881 . - . ID=g11045.t1;Parent=g11045;Name=g11045.t1 NODE_3190_length_4054_cov_34.1834 . five_prime_UTR 3849 3881 . - . ID=g11045.t1.utr5p1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 3813 3881 . - . ID=g11045.t1.exon1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 3813 3848 . - 0 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 3388 3486 . - . ID=g11045.t1.exon2;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 3388 3486 . - 0 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 3058 3187 . - . ID=g11045.t1.exon3;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 3058 3187 . - 0 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 2621 2738 . - . ID=g11045.t1.exon4;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 2621 2738 . - 2 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 2443 2496 . - . ID=g11045.t1.exon5;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 2443 2496 . - 1 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 2087 2249 . - . ID=g11045.t1.exon6;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 2087 2249 . - 1 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 1689 1835 . - . ID=g11045.t1.exon7;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 1689 1835 . - 0 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 1281 1386 . - . ID=g11045.t1.exon8;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 1281 1386 . - 0 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 910 1037 . - . ID=g11045.t1.exon9;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 910 1037 . - 2 ID=cds.g11045.t1;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . exon 234 436 . - . ID=g11045.t1.exon10;Parent=g11045.t1 NODE_3190_length_4054_cov_34.1834 . CDS 234 436 . - 0 ID=cds.g11045.t1;Parent=g11045.t1;3_prime_partial=true #PROT g11045.t1 g11045 MNGYRVAPDGTSQADHCAKIAAEALAKGGGSCPEAHLMLGWMTSKSFEEAIAHFSRAVADADANLIVTGHVGTLWDAEPLRPLYRSIHHLGNALRKSGQMKQALAQYLRLVSLDNRWINSSPPYANFRYHIPEVYLALKDIEGLKRFTKQHCEGLVPKLFSYTSSCLPWSYGWALLKYMEVAKAPNFSPKGRELGSFVVLPYEATAHGVATCVTNVILNSKAIPYLSGEQPLPDTPAIVELNTCKGLDQALMYAKGAAKLWQSIAGATQWLKQQQETFMAIVCCEGRGKLEMRFKPNPCASLPKDIFTFAFFERIMKSGSVYLTCPLLANEGKRMLHMAIMGEAATPSHVALVIDAHKRRGLDMETDNELTPMHMACYYDAPPPPSSFSLVPAQ # ORIGINAL: g13113.t1 original gene structure, not modified by PASA NODE_2704_length_5384_cov_37.4343 AUGUSTUS gene 209 3741 . - . ID=g13113;Name=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS mRNA 209 3741 . - . ID=g13113.t1;Parent=g13113;Name=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 3619 3741 . - . ID=g13113.t1.exon1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 3619 3741 . - 0 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 3208 3294 . - . ID=g13113.t1.exon2;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 3208 3294 . - 0 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 2517 2657 . - . ID=g13113.t1.exon3;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 2517 2657 . - 0 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 2030 2175 . - . ID=g13113.t1.exon4;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 2030 2175 . - 0 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 1042 1689 . - . ID=g13113.t1.exon5;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 1042 1689 . - 1 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 651 834 . - . ID=g13113.t1.exon6;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 651 834 . - 1 ID=cds.g13113.t1;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS exon 209 286 . - . ID=g13113.t1.exon7;Parent=g13113.t1 NODE_2704_length_5384_cov_37.4343 AUGUSTUS CDS 209 286 . - 0 ID=cds.g13113.t1;Parent=g13113.t1 #PROT g13113.t1 g13113 MISIVGLHPTDVALLIVGVTVTVVVLVAAVVGRSRWFPMRQKGRDRNFRGSVDVSVEKKDAVLEAHKLMREIRMSGGQFAASGWSLVGLESGVRVWRQTKANLSRILCSAVVEGAPKDVADALFECASRGEWDFGIASGRVVSTVSASGDVISLRTIIGDEKTIVRHWADESDGSRVIAESLLDQDTPVTPPTRGHFSPYLRRRYYVCQPLMAATTSVSALSPGKAPLTGAVTTATPSTRCMVTIALDCEGLVQPTGVAGAVACLNLYGLNGVLAASDLTNDISVLGKTLAAFREYLSQRSAWTTLPLPSAPEYTISSQATSANAVVSSSASSGTTTPVVAQAEAYVAKHRLAAKADEAVAMLLEASLATEKDGWIFDGEKNGVRCMRRKPDGSGINCMKGSGRVNAPPKMILEVVDGFKYKKEYDQLFKQGVNAEQLDELTRVGYMEYIGIWPTSPRDFVVMQSIRR* # ORIGINAL: g13716.t1 original gene structure, not modified by PASA NODE_1476_length_11061_cov_46.3234 AUGUSTUS gene 8148 10291 . + . ID=g13716;Name=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS mRNA 8148 10291 . + . ID=g13716.t1;Parent=g13716;Name=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 8148 8183 . + . ID=g13716.t1.exon1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 8148 8183 . + 0 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 8274 8458 . + . ID=g13716.t1.exon2;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 8274 8458 . + 0 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 8620 8691 . + . ID=g13716.t1.exon3;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 8620 8691 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 8818 8889 . + . ID=g13716.t1.exon4;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 8818 8889 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 9290 9361 . + . ID=g13716.t1.exon5;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 9290 9361 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 9445 9516 . + . ID=g13716.t1.exon6;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 9445 9516 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 9596 9667 . + . ID=g13716.t1.exon7;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 9596 9667 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 10059 10130 . + . ID=g13716.t1.exon8;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 10059 10130 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 10216 10291 . + . ID=g13716.t1.exon9;Parent=g13716.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 10216 10291 . + 1 ID=cds.g13716.t1;Parent=g13716.t1 #PROT g13716.t1 g13716 MERNVGRSGGVSGNRRFVSVVDLRAGRYTRLSALVVAVCLLCQVEGVIGAFPDTCTCNGGAVLSCAFPPGTTTVQWASKQLTSIASGLFDGLPGLKTLVLGVNQITTLPSGIFDKLTALIYLRLSSNQIAALPSGVFDKLTALNMLHIDWNQIPALPSGIFDKLSVLTALWLHSNHIETLPSGIFDKLTALAELQLHANQIATLPSGVFDKLIALAELRLEANRIATLPIGVFDKLTALTSL* # ORIGINAL: g13715.t1 original gene structure, not modified by PASA NODE_1476_length_11061_cov_46.3234 AUGUSTUS gene 2634 7562 . + . ID=g13715;Name=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS mRNA 2634 7562 . + . ID=g13715.t1;Parent=g13715;Name=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 2634 2719 . + . ID=g13715.t1.exon1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 2634 2719 . + 0 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 2953 3024 . + . ID=g13715.t1.exon2;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 2953 3024 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 3267 3338 . + . ID=g13715.t1.exon3;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 3267 3338 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 3566 3637 . + . ID=g13715.t1.exon4;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 3566 3637 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 4054 4274 . + . ID=g13715.t1.exon5;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 4054 4274 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 4711 5108 . + . ID=g13715.t1.exon6;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 4711 5108 . + 2 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 5213 5885 . + . ID=g13715.t1.exon7;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 5213 5885 . + 0 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 6017 6231 . + . ID=g13715.t1.exon8;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 6017 6231 . + 2 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 6361 6475 . + . ID=g13715.t1.exon9;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 6361 6475 . + 0 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 6569 6617 . + . ID=g13715.t1.exon10;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 6569 6617 . + 2 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 6722 6907 . + . ID=g13715.t1.exon11;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 6722 6907 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 6985 7118 . + . ID=g13715.t1.exon12;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 6985 7118 . + 1 ID=cds.g13715.t1;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS exon 7207 7562 . + . ID=g13715.t1.exon13;Parent=g13715.t1 NODE_1476_length_11061_cov_46.3234 AUGUSTUS CDS 7207 7562 . + 2 ID=cds.g13715.t1;Parent=g13715.t1 #PROT g13715.t1 g13715 MLTCSDLNTNQIATLPSGIFDKLTALTTLYLDSNQFATLPSGIFDKLTALIAVGLVSNQIATLPSGIFDKLTALNILRLQSNQIATLPSGIFDKLTSLTELGACRCKAGWTGTNCDSSCASDRFGVNCNSTCSCKNGAACDRFTGACTCTLGWTGPNCDIPCTSERFGANCNSTSCACNRGVCDDGFFGNGTCNCSDVLGFGGPNCNTSCDRLQMYGYGCKTPCSCENGATCNASTGECTCAFGWKGVVCNVIVPPSAPKVNATAELSDYHVAIRLRWYHDDVGPRPWNSTWYYEIRRAGCFSKVYQVGDVLTFLDTDVVIHQGYLYYVRAFNSRNVSSLAGESSIENLEKAELPLPPIVSSTPTLNPDNQQSMIKFTWTEDTSSGPIIKTFIFRDGRLVLEGQMATEYKDRDVAFGKTYVYEIISVNHIGNSTAARFNETASIGPNSTPTVGASSSSSVAGPVAGGVVGAIVGAAGIVFAILFVRKRTSRKKMEALARSELDLIDTVVRRPEIAEIEIPGSCIHLRNRIGEGEFGEVYLADITPRGGSVAAIKAAVKTFKVTSLSTADEIRSARSAFMAEIDLMRTIPNHANIIELIGVCTQSDPNCMVLEFAAHGDLRHFLTDSKVSDFSSTDLLCFCIDIARGMDHLAKCEIVHRDLAARNCMVVAGPRAPNTTENGWKLSPKAQVIVKVADMGLSRDTAATDYYAAKTRRKLPVKWMAPESLEKRIFTHASDVWSFGIVMWEVFARGAKPYPGLENYAVSTYLSQNKRMEPPKDCPKLAFAAMEACWRKHAETRPQFSQLVLQLRRGMAVLCGTDRGGGNLGGDDVDSVADLRQSKPVAITVPEGAYAETMGEDESLYTLQNPIFRKDSNSLTGHSSA* # ORIGINAL: g2697.t1 original gene structure, not modified by PASA NODE_18863_length_169_cov_71.8191_potentialcontaminant AUGUSTUS gene 2 169 . + . ID=g2697;Name=g2697.t1 NODE_18863_length_169_cov_71.8191_potentialcontaminant AUGUSTUS mRNA 2 169 . + . ID=g2697.t1;Parent=g2697;Name=g2697.t1 NODE_18863_length_169_cov_71.8191_potentialcontaminant AUGUSTUS exon 2 169 . + . ID=g2697.t1.exon1;Parent=g2697.t1 NODE_18863_length_169_cov_71.8191_potentialcontaminant AUGUSTUS CDS 2 169 . + 0 ID=cds.g2697.t1;Parent=g2697.t1 #PROT g2697.t1 g2697 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM # ORIGINAL: g341.t1 original gene structure, not modified by PASA NODE_523_length_21871_cov_38.6899 AUGUSTUS gene 182 4210 . - . ID=g341;Name=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS mRNA 182 4210 . - . ID=g341.t1;Parent=g341;Name=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 4172 4210 . - . ID=g341.t1.exon1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 4172 4210 . - 0 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 3898 3941 . - . ID=g341.t1.exon2;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 3898 3941 . - 0 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 3585 3707 . - . ID=g341.t1.exon3;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 3585 3707 . - 1 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 3293 3345 . - . ID=g341.t1.exon4;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 3293 3345 . - 1 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 2715 2895 . - . ID=g341.t1.exon5;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 2715 2895 . - 2 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 2150 2291 . - . ID=g341.t1.exon6;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 2150 2291 . - 1 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 1781 1876 . - . ID=g341.t1.exon7;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 1781 1876 . - 0 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 1315 1670 . - . ID=g341.t1.exon8;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 1315 1670 . - 0 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 796 945 . - . ID=g341.t1.exon9;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 796 945 . - 1 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 447 619 . - . ID=g341.t1.exon10;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 447 619 . - 1 ID=cds.g341.t1;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 182 269 . - . ID=g341.t1.exon11;Parent=g341.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 182 269 . - 2 ID=cds.g341.t1;Parent=g341.t1 #PROT g341.t1 g341 MKGGSAKPSALMAPNPRKSTGKDSSRNNASAAHEDGGHADQKYQTQFEMQRASRRISVLMNQITMQRAKSRDTASDIDSIPLGNYKEITFYNLPAISQTPNFQRCANTEEFDAFLLSALHYFKNFFKMKKLENELELEKESSGGITTHSAKARSYEAIKGEQESRLSNLAQRYAFLLLRIGRQKNQTKDRFLFETLYNFTTYIVWLAFGRLDWYATSNELGRLMRSDMFNLNARVSLGEPDMMRAGNNRSVTTSGGHGTGIVGRNSALGGAGRAVTPGNASSNTNTTANKEGTEGGADRSSSRTDGLASRDADGGEGETHRLATSGADRPGSQTPGGDMGSSRKGARSTMSSSAKKRPSVYATLNVRSPIIASLLPKPSESAAWLFDRRKPMQRPGAKKKAEAGRFVFAVNPDHFTDIGSTPILDNPSSGFSQLRDRRNSRRASVIIMEQPSETANNSASSDEDSDYEADKPSRSPSLSSV # ORIGINAL: g345.t1 original gene structure, not modified by PASA NODE_523_length_21871_cov_38.6899 AUGUSTUS gene 17716 21076 . - . ID=g345;Name=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS mRNA 17716 21076 . - . ID=g345.t1;Parent=g345;Name=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 20978 21076 . - . ID=g345.t1.exon1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 20978 21076 . - 0 ID=cds.g345.t1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 20595 20729 . - . ID=g345.t1.exon2;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 20595 20729 . - 0 ID=cds.g345.t1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 20329 20401 . - . ID=g345.t1.exon3;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 20329 20401 . - 0 ID=cds.g345.t1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 19352 19831 . - . ID=g345.t1.exon4;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 19352 19831 . - 2 ID=cds.g345.t1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 18293 19029 . - . ID=g345.t1.exon5;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 18293 19029 . - 2 ID=cds.g345.t1;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 17716 17988 . - . ID=g345.t1.exon6;Parent=g345.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 17716 17988 . - 0 ID=cds.g345.t1;Parent=g345.t1 #PROT g345.t1 g345 MKEIRQANSLSLNGGRWLKRFAMTGYSKDSSEAGVQYYLKQKVDQELEGIKSRFKFPMGGAWNVFGVCDTSDTLEEGQCFLPLNPPYYGRVAVMRTPCIHPGDIRILEAVPCPKLNHLRDCLVFSTRGSRPPADEMGGGDLDGDIYCVCYDADIVRSVVPVEPANDGASTEKKEKKDVPSEGDDVSIVALLVRNFTNGMRDMSLGMIGNAHLIISDHNWNKGGVACEVSLHLAELHFVAVDTAKTGISAAVPDYIRSILDYLGRPHFMPERASGAPGKTYHSTSVLGMLYDAVESELVAPSLGKPIEPRMDAKLILEGVVADAALIEHAKRDFHAFLDDSAVATQVTDKEVTDVDESARNDVHNVIRHTYEVRFMYAPRDDTEHPGVRSAPLQHRPSCAVQLAEERRAAMCAAGEETGLYPDFPHMYFFPFMNGGGEGAPTDGMARLLSDLSGPNPRAVTCTCHVGRSGGMKAGMASTMRKRSDTELDRLASAYYYVATQRVLAEWSKAWSNLESAQKALVDCETRNDVEGAADASKRIREVEKDLRGSYRFSRFPWEIAHDRLFHIRAAASGRSNGRLPQIVDESEIDRVVMSRRRR* # ORIGINAL: g343.t1 original gene structure, not modified by PASA NODE_523_length_21871_cov_38.6899 AUGUSTUS gene 8248 10538 . + . ID=g343;Name=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS mRNA 8248 10538 . + . ID=g343.t1;Parent=g343;Name=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 8248 9159 . + . ID=g343.t1.exon1;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 8248 9159 . + 0 ID=cds.g343.t1;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 9350 9613 . + . ID=g343.t1.exon2;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 9350 9613 . + 0 ID=cds.g343.t1;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 9829 10111 . + . ID=g343.t1.exon3;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 9829 10111 . + 0 ID=cds.g343.t1;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 10363 10538 . + . ID=g343.t1.exon4;Parent=g343.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 10363 10538 . + 2 ID=cds.g343.t1;Parent=g343.t1 #PROT g343.t1 g343 MALRMTTLGSKALSLTDAGENSLDGLHGLDSAADDIGDIHDDAALFEQHPCSNTSGESFEAEQQKDVGLESGAASANSAPSDGVEADRGKRKLNDYVDGSAPFKRARVERDCVSAGAPPCDSHCEHGPVVHSGGLACVQPAEESQWDAFFDESIGRLVYVHKMSGNTSFEPPRTPSSEGFVGGSEDGASCVMSADRPFLGTAPHLGAFVDRSDTTHLKAEGRRITMRGPLDNDGDTAECTIAGNSTLDSSVTTLLSEWQNPALTSDSVAIPSVAATATDAGGFRPLVPYRFSRDMLSTLSVIGQVDNKFIACLMDRPSEQTSDISTDTIPDRKRVLVLIDQHAAHERVRLELYEDEVKKFALSYDETQQSERECFSNAESDGHLRTSLSDTLARLVAENGAALFRWGIELSLPANIFTNADTHSGHVTAHVTHVPPSIVDRVGADASVVSGIVREQLQIAEEGGRGACGGVMPRSLHAVLQSKACHGAIRFGDRLTLDECRTLVRELTLCRLPFQCAHGRPSVAPLADIDGLAAVVALMAGQFG* # ORIGINAL: g342.t1 original gene structure, not modified by PASA NODE_523_length_21871_cov_38.6899 AUGUSTUS gene 5235 7642 . + . ID=g342;Name=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS mRNA 5235 7642 . + . ID=g342.t1;Parent=g342;Name=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 5235 5331 . + . ID=g342.t1.exon1;Parent=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 5235 5331 . + 0 ID=cds.g342.t1;Parent=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 5516 5797 . + . ID=g342.t1.exon2;Parent=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 5516 5797 . + 2 ID=cds.g342.t1;Parent=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS exon 5913 7642 . + . ID=g342.t1.exon3;Parent=g342.t1 NODE_523_length_21871_cov_38.6899 AUGUSTUS CDS 5913 7642 . + 2 ID=cds.g342.t1;Parent=g342.t1 #PROT g342.t1 g342 MIRRLDPKCASLLRSGIAITSLAQCVEELILNAIDAGATLVDVRLDLTRFGARVSDNGVGVSREDLKVLGERHATSKCASISDLETGISTHGYRGEALASICDIATLEINTRRRVEDGGDGATYMKIMSPGVAAHHISRCLQDRPSTGTTVVVHDLFRGLPVRRQLLDPGKEVERCRRAVESITLGNPHVAVTLRSDASRADSQPIIATRRCKSQAAVFADLFGHQRASLLRAVDGSSVRFNVSGWISLETASTKSLQYVFVNGRLSLNTPIHRAVADALGASTLIRPTVVQAGGLGDPQQGQADSNPTKGRNAIFVINVQCAQREVDASFEPSKTIITFRHWDELLATTKQAVKNFVDTNGLAAPSLYAQLVANTGARGSQPSQASPAEFASTRSDTHSQSLFSDQEEIVSGLSLRPPAPAEDYSSSNRRILHSETVRRFTANEDEADPKEINAVRTSSQTLDDAMPTACYASRMADTDHTVAHETRAPTSILFGENEVTEQCASVGLPDSSPVHRSADRRNTDNNGDSVDCAFDTAYNVTTEARPVAPFVSATDFDHSIARPSIQGVESHSIIGEFPQFSSSGDPLSIDIRPQQPTGNANSTDNDFAGIPTSDDGFASSRCRLGSETPWTDRSERSGGIAGDTVFGGGVATPVFRRRPLSAHEEANYQSPVQFMGPSSTVCYDAANLCPIAPLAIRKNLY* # PASA_UPDATE: g344.t1, single gene model update, valid-1, status:[pasa:asmbl_7954,status:3], valid-1 NODE_523_length_21871_cov_38.6899 . gene 11399 17291 . + . ID=g344;Name=g344.t1 NODE_523_length_21871_cov_38.6899 . mRNA 11399 17291 . + . ID=g344.t1;Parent=g344;Name=g344.t1 NODE_523_length_21871_cov_38.6899 . five_prime_UTR 11399 11489 . + . ID=g344.t1.utr5p1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 11399 12022 . + . ID=g344.t1.exon1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 11490 12022 . + 0 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 12251 12359 . + . ID=g344.t1.exon2;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 12251 12359 . + 1 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 12551 12835 . + . ID=g344.t1.exon3;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 12551 12835 . + 0 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 13399 13560 . + . ID=g344.t1.exon4;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 13399 13560 . + 0 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 14034 15113 . + . ID=g344.t1.exon5;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 14034 15113 . + 0 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 15542 15762 . + . ID=g344.t1.exon6;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 15542 15762 . + 0 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . exon 15957 17291 . + . ID=g344.t1.exon7;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . CDS 15957 17019 . + 1 ID=cds.g344.t1;Parent=g344.t1 NODE_523_length_21871_cov_38.6899 . three_prime_UTR 17020 17291 . + . ID=g344.t1.utr3p1;Parent=g344.t1 #PROT g344.t1 g344 MPQGLPPNWVEEYSKTRQRVYYFNTVTNESVWERPTNDTPSRHVQTYDVNRANDRKTAGVRTDTRSRVPSDRETYEVHRADTARPGAQNDHIDSYVAQRTDVRPRGPAADYYAQRIKDRKGPSVPTDAHLRAPNYVDNVKAGHSEVHPQHNNTRTLSGYSESRAPTEAAVGTPHKMRRASESVVHMEIDEVAAESISAASASERLKYGSQVIDANDISAELSAMAPHPSGRNVGGVGVEAWAKGHRDLSVSIHGPVYRRLNIVVDTNVLLSNLAAIEALGYMWDALAMAGLVVTIVIPWIVIHELDGLKQRTTADHDSPSAPSIGTLARHATRFLHDNLAVGAEFIVAQGMTHDRSAKALVPMTNDERVLACCLALVEDNANAQAYAQSPQPIAVVVLLTDDRNLSVKALASSIPALGSRLFPTAPEDIMLLSQDPISFQRQRHVAAVRMAAPQMSAGHVMHSVGVDRHAKSSAEPQWMACEDSEHAPFQIDDVASFVGVDDGPRASLGHDDDSLLHMDADMRNNDDEFSRQQQQLKRTRAKIVPFGSSVGAATSDPSSATGGGSVVSNISTNASVDDSGQRQRTNARLVPFQSGTAVTTKETTVELSQEQKLPQQQQQQHPQQYPQQQQQRATRARIVPTNASVVQHSAENASHAPAEPQHSDAHNGTVRASSWAVLTRTLSEALSPAIEYMMAKAYGHEDWMELVTVQPPWTGRGCLHVLQHHHIAVFKDYVRDGATRDAIKEMEGTLRIHDAAAARGALSISAHALGSLASQAASVLETLVLGITEPRGARNGRYPGQHDSDEEISPSHIGGDLGSLRQLPSKDSAITALTRGTSTLRTLASSVLEDEKRLSTSLHAARPSTLPMQISSQPVAPQQSPVAWRVHAHTHPSPMSQTNNARHVDSQPSSAPGTPRTSAATTAVTAATAIALEPTAEGGVLAKQFVSVKEGLTLPQSIADKYQILFGLLSAEGAAASLAFTQHVCETYATILSPYFDSNGCLVAGASSQLSTADLAMLLTHVAELGRHVESIVRCLHAATCDETCSAGAGEALLVDSGYATAADIARDKRTTLLPSWTETLSSAVSSMTTQFASWNCNVHPASFLLLMCDATHAPAVPVFGAYAEALLNWLHAVYSALIQHRIRTTGGQS* # ORIGINAL: g7394.t1 original gene structure, not modified by PASA NODE_2565_length_5857_cov_42.4512 AUGUSTUS gene 508 4119 . + . ID=g7394;Name=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS mRNA 508 4119 . + . ID=g7394.t1;Parent=g7394;Name=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 508 620 . + . ID=g7394.t1.exon1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 508 620 . + 0 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 746 859 . + . ID=g7394.t1.exon2;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 746 859 . + 1 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 999 1125 . + . ID=g7394.t1.exon3;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 999 1125 . + 1 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 1317 1709 . + . ID=g7394.t1.exon4;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 1317 1709 . + 0 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 1871 2180 . + . ID=g7394.t1.exon5;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 1871 2180 . + 0 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 2419 2592 . + . ID=g7394.t1.exon6;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 2419 2592 . + 2 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 2796 3041 . + . ID=g7394.t1.exon7;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 2796 3041 . + 2 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 3201 3430 . + . ID=g7394.t1.exon8;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 3201 3430 . + 2 ID=cds.g7394.t1;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS exon 3616 4119 . + . ID=g7394.t1.exon9;Parent=g7394.t1 NODE_2565_length_5857_cov_42.4512 AUGUSTUS CDS 3616 4119 . + 0 ID=cds.g7394.t1;Parent=g7394.t1 #PROT g7394.t1 g7394 MTRQARIVVVGGGLAGLSAAIEADRNGAAVVLIDKEPRIGGNSAKATSGINGMNTAAQSKHNITDAEVAFKKDTVSSGGGLSVESLVEVLVVKSKSAHEFLAEFGLNLEEISQCGGHSVPRTHREPAQADGRPSPVGWNIIKAVKGHIDAGKTGIKIINDARATRLIQNDAGHVVGVEYVSHNAVSTLEADAVILATGGFSFDRDSADSLLRKYAPQLAELPTTNGAFATGDGIRIGQAVNADLVDMEQVQVHPTGFVDPANPFNPVKFLAPEALRGCGAVLLNGNGVRFANELTLRDALSAAILAHGREISAFIPPLTGGEPQERKSRVAYILLNDEMGRGFGMGALDFYKSKGLVKTFADAASVAAFIGCAPEAVRDTLTRYEQSAQAGADEFGKTVFPVKQVGDGPFHVAVITPSLHYTMGGLRINGDGQVLRRVEDTFKPIPRLFAAGEVTGGVHGKNRLAGNSLLECVVFGRTAGARAAAVVLSDEPAFKGKDVFVPLKLRDRECLSTYTRLFRFDLPSPLHTTGFDVGQYISTRAKIDGQDIIRYYSPCNRPDDYGVLELLIKVDDKGVMSHYFESLRPGDVVEFSGPLGDLHIDFARKKHIGLVCGGTGISPMLQIIRKVLHELPEHPDVTVKLLWGAMVETELVYRDRLEANVASHPQQIGLYFVLNNPPANWTQGTGFINEKVLREQLPAPADDTMIVMCGPPGMCKALKPAFEKIGYTKDNFFSFM* # PASA_UPDATE: g3245.t1, single gene model update, valid-1, status:[pasa:asmbl_1395,status:12], valid-1 NODE_1376_length_11709_cov_40.6748 . gene 9144 11387 . - . ID=g3245;Name=g3245.t1 NODE_1376_length_11709_cov_40.6748 . mRNA 9144 11387 . - . ID=g3245.t1;Parent=g3245;Name=g3245.t1 NODE_1376_length_11709_cov_40.6748 . five_prime_UTR 11385 11387 . - . ID=g3245.t1.utr5p1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . exon 11283 11387 . - . ID=g3245.t1.exon1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . CDS 11283 11384 . - 0 ID=cds.g3245.t1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . exon 10174 11002 . - . ID=g3245.t1.exon2;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . CDS 10174 11002 . - 0 ID=cds.g3245.t1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . exon 9908 9974 . - . ID=g3245.t1.exon3;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . CDS 9908 9974 . - 2 ID=cds.g3245.t1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . exon 9685 9765 . - . ID=g3245.t1.exon4;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . CDS 9685 9765 . - 1 ID=cds.g3245.t1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . exon 9144 9383 . - . ID=g3245.t1.exon5;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . CDS 9323 9383 . - 1 ID=cds.g3245.t1;Parent=g3245.t1 NODE_1376_length_11709_cov_40.6748 . three_prime_UTR 9144 9322 . - . ID=g3245.t1.utr3p1;Parent=g3245.t1 #PROT g3245.t1 g3245 MSRYLARLDDLRTNYKYKPNEAFRRIRASTLVQLILETAIVRNREFAACNVAAPPAYDDSPPRRPHDHLGDGSARDEDGDTLAPMPDLNNLRGFRARDAPTNNDDNRSMRSTFSTLHDVITGVGELDMSGRPSSPGAALIDMDGFEEEDGPVLLLDVREKDEFDLCHAIGARCHPATMLSRTMNPFSADALRYKNKAGRLIVIYDETESIAPRVATIFVERGFENVFMLSGGLKVLAQKFPYGLIAGPLPVSCIAPASAGKSSGGTTARTTTSMSTRGASTSATRGPTGAPKAAAVPELPIERGNRLDPNNFGLISDFLDNALLAEAGNSTSRSTSRGSVATNAGGKAPPSRTSGSIGTGPRTTTTSRAGAGSTRPLAR* # ORIGINAL: g3242.t1 original gene structure, not modified by PASA NODE_1376_length_11709_cov_40.6748 AUGUSTUS gene 949 1628 . + . ID=g3242;Name=g3242.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS mRNA 949 1628 . + . ID=g3242.t1;Parent=g3242;Name=g3242.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 949 1085 . + . ID=g3242.t1.exon1;Parent=g3242.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 949 1085 . + 0 ID=cds.g3242.t1;Parent=g3242.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 1259 1628 . + . ID=g3242.t1.exon2;Parent=g3242.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 1259 1628 . + 1 ID=cds.g3242.t1;Parent=g3242.t1 #PROT g3242.t1 g3242 MGTKGSGDVALYIRKGIRWTAAADQIRVPGEDNRRRHLVGARLAGRPTPSWAHGDLKKPGADVGHEIARDSATTPVFIGNGRDGVRRDQIRRGEDEPTDEQPDGVIDFVILNGALWTANPRCAARLGPDVGQRPSANVPCKVHVPAPPVKSKPPPQPAQNTARGVIVA* # ORIGINAL: g3244.t1 original gene structure, not modified by PASA NODE_1376_length_11709_cov_40.6748 AUGUSTUS gene 5289 8021 . - . ID=g3244;Name=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS mRNA 5289 8021 . - . ID=g3244.t1;Parent=g3244;Name=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 7976 8021 . - . ID=g3244.t1.exon1;Parent=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 7976 8021 . - 0 ID=cds.g3244.t1;Parent=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 6264 7750 . - . ID=g3244.t1.exon2;Parent=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 6264 7750 . - 2 ID=cds.g3244.t1;Parent=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 5289 5627 . - . ID=g3244.t1.exon3;Parent=g3244.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 5289 5627 . - 0 ID=cds.g3244.t1;Parent=g3244.t1 #PROT g3244.t1 g3244 MPSFGELPRVAIIGTGVYGRSLAQRFVAAGIPVTFGSRSAGGCKREVGGAKDNNNNNSYAAERTPLFIEGVPVERPCAAVARADIIVLAVPLSAHCTVARCIAHELAASKTAHPQKKIIIDISNAPLDSVGRNQQRGALTRTPNPISLSRNETIVAGLPSPAFTTKGGVVYVSVSDKDADIGGGFGINRGAFDGSVIGDEEEDEEGGSCSRDSNSVSCATACGDAKQYLCNSAAVVVDIENCAPTCPKKGGSTTAADLPTVTRSTHQHHQQYSRREETGGVPAARDRQAVEGESNAESLQRMMPAESVSVVKAFNTVGAHVIRSHPGEMASYDDRVLVCGDSREAKARVAALIAAIGMRAVDAGSLSAARDVERLPLRFFGGDWRHAFCASVLLFLLAFVYVGVRDIVLAGKEARWGDLFLLKFNVALGWHSLAMMSATFFGGLVAAVRQLWTGTARDPFPAWLDGWLRARKAMGLMGLASGMMHACSSLATDSLFTSFSYLGTHPGQAYQVSMLFAILTLSVFVVLGITSIPSVGSTLSWNEWQFIQSKLGHFGVALAAVHALTMGYAVGDFGSPGSLSSWPHHVPPVSVIAGGVACAVVALRLLLALPFVSSRIDRIRSSA* # ORIGINAL: g3243.t1 original gene structure, not modified by PASA NODE_1376_length_11709_cov_40.6748 AUGUSTUS gene 2952 3746 . - . ID=g3243;Name=g3243.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS mRNA 2952 3746 . - . ID=g3243.t1;Parent=g3243;Name=g3243.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS exon 2952 3746 . - . ID=g3243.t1.exon1;Parent=g3243.t1 NODE_1376_length_11709_cov_40.6748 AUGUSTUS CDS 2952 3746 . - 0 ID=cds.g3243.t1;Parent=g3243.t1 #PROT g3243.t1 g3243 MPSDAEADGHRRPRDRDALDGDVQAAAKRPKLETTRPTATEQAHKFGALVLGAGQATVGHATVTAMLAWCGTELNSNEYQRDVPRALVQRIHREVFSVPRRADQVPSGPSAPSIGAVTAAPNAISPVTTASPLLNPDPTFEGIATVNLSSMLHAACYVVDFLRALPDVPERASLWQRFLATESVLVVSRLYRLAMAIRDVAEHESGCMLVNHLLKRKEVRWLIRDPSKWEAWLHLLVFTLFPLDAHWPIARNERQPLGIHRLEH* # ORIGINAL: g2913.t1 original gene structure, not modified by PASA NODE_6736_length_517_cov_20.095_potentialcontaminant AUGUSTUS gene 1 495 . - . ID=g2913;Name=g2913.t1 NODE_6736_length_517_cov_20.095_potentialcontaminant AUGUSTUS mRNA 1 495 . - . ID=g2913.t1;Parent=g2913;Name=g2913.t1 NODE_6736_length_517_cov_20.095_potentialcontaminant AUGUSTUS exon 1 495 . - . ID=g2913.t1.exon1;Parent=g2913.t1 NODE_6736_length_517_cov_20.095_potentialcontaminant AUGUSTUS CDS 1 495 . - 0 ID=cds.g2913.t1;Parent=g2913.t1 #PROT g2913.t1 g2913 MMPGMNRGAKFSVALSAPWQLNSQITLTNAVVSCDVLADGYSVTPYFNGTVVGTLTLGSAVLTVAASYPFAERRPLTFTLASGSGLKLSQLLALLPGAPTIANTMEGFPALPGSTGITDLELRSFSYSAVTSALDSMSFAVAVPIDWTVFTGFVVKNAVLSVSVK # ORIGINAL: g5914.t1 original gene structure, not modified by PASA NODE_2057_length_7892_cov_41.2805 AUGUSTUS gene 122 925 . + . ID=g5914;Name=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS mRNA 122 925 . + . ID=g5914.t1;Parent=g5914;Name=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS exon 122 226 . + . ID=g5914.t1.exon1;Parent=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS CDS 122 226 . + 0 ID=cds.g5914.t1;Parent=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS exon 344 494 . + . ID=g5914.t1.exon2;Parent=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS CDS 344 494 . + 0 ID=cds.g5914.t1;Parent=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS exon 678 925 . + . ID=g5914.t1.exon3;Parent=g5914.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS CDS 678 925 . + 2 ID=cds.g5914.t1;Parent=g5914.t1 #PROT g5914.t1 g5914 VRRVVCVRAGGKERNFSVLAVAGNEEGAIGFGSGKSDEPDVAAREAALRAARNLVPLKLFEGRTLFNTVRVKVGAVHVEMRPAAAGKGLVCHHVLKKICQCAGITDISANVRGSGNPLNIARAALLCFEKQLSYEDVARRLGRNVLKMRKDRIEQGKNHPYFGVAKR* # ORIGINAL: g5916.t1 original gene structure, not modified by PASA NODE_2057_length_7892_cov_41.2805 AUGUSTUS gene 6181 7819 . + . ID=g5916;Name=g5916.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS mRNA 6181 7819 . + . ID=g5916.t1;Parent=g5916;Name=g5916.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS exon 6181 7819 . + . ID=g5916.t1.exon1;Parent=g5916.t1 NODE_2057_length_7892_cov_41.2805 AUGUSTUS CDS 6181 7819 . + 0 ID=cds.g5916.t1;Parent=g5916.t1 #PROT g5916.t1 g5916 MTGGAPDGPSTGSAPLPQPPVPAHHVATLPALPPALGGAGITSPPTTRGNAHAQSAVESGVSASTEHTSMAEGMTPSTDASFLLRHPKGDSEAAWLPTHHLENGSVASASTGIIGFSSNGATMCVTPGAVDASVVLAEAGAARTAALRAMGRPEKDTSFTSFGSTPPPKPVTSLTHHERNVEAAELQRQAIEFSVHGTVAGPGLHSAETASALAIVEPKEPPTNAHPKSSPAKTGADKPADHGAVAAGATNLAKNGAPLKPKVTADKTAPAQSASSQPNTAAAPVAVDDPAEFDEHLAQLLETFKKGDISKSFATPLSYNSSDSFRLAQLALVEAQRPDEQNTKVAADIVDLKDTIGDLVTIARSIHTTIVSPGASATNLRGGPSATNLRSNFSIANMSATDLTLPTIAGSMASVNVMVTGPELGGADSYLNLAVDGGDGPSLPLGRLSTRLRVGVERMLDLLVDVETQRTSSAAQRDRLASLLLACSIETMKMHTDKVRLEVMLRRRVEEVKALGAANQELAKEIAQAKTRSERAVLQFHQDKQS # PASA_UPDATE: g5915.t1, single gene model update, valid-1, status:[pasa:asmbl_3390,status:3], valid-1 NODE_2057_length_7892_cov_41.2805 . gene 1181 6026 . + . ID=g5915;Name=g5915.t1 NODE_2057_length_7892_cov_41.2805 . mRNA 1181 6026 . + . ID=g5915.t1;Parent=g5915;Name=g5915.t1 NODE_2057_length_7892_cov_41.2805 . five_prime_UTR 1181 1462 . + . ID=g5915.t1.utr5p1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 1181 1799 . + . ID=g5915.t1.exon1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 1463 1799 . + 0 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 1915 2005 . + . ID=g5915.t1.exon2;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 1915 2005 . + 2 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 2179 2354 . + . ID=g5915.t1.exon3;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 2179 2354 . + 1 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 2602 2748 . + . ID=g5915.t1.exon4;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 2602 2748 . + 2 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 2888 3012 . + . ID=g5915.t1.exon5;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 2888 3012 . + 2 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 3103 3205 . + . ID=g5915.t1.exon6;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 3103 3205 . + 0 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . exon 3430 6026 . + . ID=g5915.t1.exon7;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . CDS 3430 5942 . + 2 ID=cds.g5915.t1;Parent=g5915.t1 NODE_2057_length_7892_cov_41.2805 . three_prime_UTR 5943 6026 . + . ID=g5915.t1.utr3p1;Parent=g5915.t1 #PROT g5915.t1 g5915 MPPATITSWTLREAMTPTVAIRGTRMDPTSSLSKMICLVFIALACASRLFDMAQAADAPSPTSATLLPNATANATMPMFTQRFPILMPGVMPQTDEAYVCAGTKLPAKEISLVEFEPLLNENVAHHVILFGCGELPTRELKSWDCKWMGSICGSDSEKYILYAWGKNAPALEIPAGVGFRVGGDTRIKYLVLQVHYGKALKYAPDHSGIAVRFTRQPLPFSAGMFVMYSNSLAIPPASVVVDTSATCTHTGGPLNPMAFRVHAHTLAKNISCERERDGVIDVLGWRDPSHAQAFLPIVGKDPIQKGDKLTARCTFDSNGRNVTTIAGSNSMDEMCNCYIMYYTESHSRCDVAQQPNPDGSIPPIPTWCIPDEKGNVAGSDEGTYLCGGGSVQQAGIWEPTVVVQESDCTQLPPCNEGWVEYIMRNGMSCCKEEYIPSHPEAPSHDDSEGFWNDSPNPIDAGFGFSAIPSWLETDRIALGQVSALTVDAQDRLWVFHRGPRVFDEMSFLPDNTLADKTPIVRDTVLCFDARSGALITSWGGGEFYMPHGISVDKRGAVWTVDCGAHVVRRYSSKGQLLIELGTLHVPGKSDRHFCKPTAAVASLDGLYVYVADGYCNARVMKFTINGKKVAEWGEYGFRLGNALPGPGFFNIPHSIALDSIGRVYVADRQNSRVQRFSRDGVFERFYALLRWGTVYAVAIAHDTLYVVNGPERSERVETTAIQLDFADASMDGRVLGYFGGKPSESDDPRWPSHPHDVSVSRDGMAVFVADIDSDYAFKFVRDAKGSGGAGWLTRPDAAGGGDAEHEASCSMRPSLWDIVPQGFSVDTFFDECPCPIHVDSSLFDTCITGVFCHAAWATDALVEAGVVDPNERIVNADGSVGLSPVFVAPRLYQDVHVLWMTYDSLTRKWLIQHVPSSKNLVSSVMGRIAMVHAAPGDPAFPPTYFSGSSGSATVEGNSSCIVAPPRVSTAPATVSVPPNTPANVPGVVAGVTATLSPLQTSKPAILPTVVHGVQTTSSSYSFASPYATITGDSRVTPLMSRGTAAALATASLCVIALVVGGVLFALIRRRKLRTKGVRYDRVGGIEMTETSTDDASTASLLAGELTGDGRGGEKHNSSNNKATRDRSRYSYRPLQALDEEEGERSCSEHEDDDEAEDVLFDAR* # PASA_UPDATE: g10354.t1, single gene model update, valid-1, status:[pasa:asmbl_6295,status:12],[pasa:asmbl_6296,status:12], valid-1 NODE_3606_length_3129_cov_35.9525 . gene 121 2916 . - . ID=g10354;Name=g10354.t1 NODE_3606_length_3129_cov_35.9525 . mRNA 121 2916 . - . ID=g10354.t1;Parent=g10354;Name=g10354.t1 NODE_3606_length_3129_cov_35.9525 . exon 2323 2916 . - . ID=g10354.t1.exon1;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . CDS 2323 2916 . - 0 ID=cds.g10354.t1;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . exon 2080 2181 . - . ID=g10354.t1.exon2;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . CDS 2080 2181 . - 0 ID=cds.g10354.t1;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . exon 581 1884 . - . ID=g10354.t1.exon3;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . CDS 581 1884 . - 0 ID=cds.g10354.t1;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . exon 121 331 . - . ID=g10354.t1.exon4;Parent=g10354.t1 NODE_3606_length_3129_cov_35.9525 . CDS 121 331 . - 1 ID=cds.g10354.t1;Parent=g10354.t1;3_prime_partial=true #PROT g10354.t1 g10354 MHMIRTPPQLMMTKLFTVRPKDIQRHAPPPRAPPHSAQDSTVTSLNSVQSISTGDTPARTRTSSQTSIPTNPEVSTLTSASGADHGQIGHAADPQALKAAIRGLAEGVPRTPSAAIGGGANPILMQPISPLSTHANPSVASSWANESVLAAAMGHPPPPRHAHATSQTLALKTHMQRRKDRSRSTSIEHGHFRRGPNQEDDEGDAEEQQPQAPARRVRRPRFAVCVIFNLHDGETEGNRVLHDFFFSHFAIIEARMRRLLTSVMGIIVAQMHAPPNTPHTPHTPHTPHTPHSPHTPHTPHPGTPSPHRAGHTLLHATPASGHSSAPLRDSFPPLSFHGHAAIVAMTATFRQEVQSLYLVPRVQEPLWLNMTTFPHRARTLTSQFVRELSRLVSDVDGRRTGFFLSSLFTAVLSHHLAWVPTVAPTADPGDADAQIIDKHASEALDVQARFFPYNPLWAQLGDLYGCLGSPPRLARTVIVGANKDLVCRLLYVASYFVRCNEVFESVDTMPTVKIPVAGSNTGARRISVQYDSSPQPPNDTSVNSRAETPDMQDAQQQRSHQQQQQQPQQGQRSTVTTPMGRLETVVEVADPSSPNTMRSFPHSAGAQKGDWTPTETPGTSRTTTPLKSATKSTDASSSTANDDSTTSPNVDPNAGPFDNYEEIPMLGFVHHRTIPDPRRTGQSGLPYAPERLYSKNFGRSLMAGYWRSYLPDLAVMGCPSFDFAVDVAADLKASVEV # ORIGINAL: g7338.t1 original gene structure, not modified by PASA NODE_528_length_21764_cov_38.9786 AUGUSTUS gene 16490 20120 . + . ID=g7338;Name=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS mRNA 16490 20120 . + . ID=g7338.t1;Parent=g7338;Name=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 16490 16582 . + . ID=g7338.t1.exon1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 16490 16582 . + 0 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 16749 16821 . + . ID=g7338.t1.exon2;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 16749 16821 . + 0 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 16962 17072 . + . ID=g7338.t1.exon3;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 16962 17072 . + 2 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 17263 17757 . + . ID=g7338.t1.exon4;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 17263 17757 . + 2 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 17991 18799 . + . ID=g7338.t1.exon5;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 17991 18799 . + 2 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 19046 19145 . + . ID=g7338.t1.exon6;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 19046 19145 . + 0 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 19337 19409 . + . ID=g7338.t1.exon7;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 19337 19409 . + 2 ID=cds.g7338.t1;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 19754 20120 . + . ID=g7338.t1.exon8;Parent=g7338.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 19754 20120 . + 1 ID=cds.g7338.t1;Parent=g7338.t1 #PROT g7338.t1 g7338 MDPPRTQRTTFADINELVGAALSLDGSDRPWEAYQQYVKCIVAISHKLLGDAESADGDPQALKSTRPQKLFTLLRNSSERAEEILTCQIYGGEGTRAPVSATAAPTPTNTPAMTPTVLVLPEFSSAPSANNESLSPLQRSPSTSFVFPPDDSSKARSLSASSVDSTSRSSGDGTSGVSSCATAAVTSLINGPQKSTATHVTSGDYQSQPHVVPSQPLGYVTQIGRASLQMHTVSPVQIAQAQNQALLKRYQKRLNTLEGAQRSALHLSLMRQCESTLAAAKAQERAIQTNIAERRKRMAEDRDQQLLRQQQQQLPANQHEADRIRAVAERVREFESSRPALSLPPDMQPDDPSYGNAIASARLAHKDHPINQLIGEFQYGFVTQGVRRGVSVDDAGSFLAEIVAGIHGFRRTVCGILAECRPPLVGVHMRTIDQQIQQLQQTHPGGDALAAMQRQRQALVRDRPWAQWCEALDAALFPPLTPLLMRLYSLSALDKLRNLEMRIAAFGSKQAAELGILPLFCLATDEELERHDRADPYMTAYGHLRQLPSAMTPFAKLECIVRATRSIIASINDYWAQRGKQDVSVGTDDLLPVLGYVILRTGMSSVLADSQFMAEFADDSCSLGEEGYCLASLLCSLDYLCGVSLDARPFASASDAKEPCALQQQQQQQQQHSDNGGVAVECMASVACENALVEEIQANDDSSTPM* # PASA_UPDATE: g7337.t1, single gene model update, valid-1, status:[pasa:asmbl_7977,status:3], valid-1 NODE_528_length_21764_cov_38.9786 . gene 13967 16050 . + . ID=g7337;Name=g7337.t1 NODE_528_length_21764_cov_38.9786 . mRNA 13967 16050 . + . ID=g7337.t1;Parent=g7337;Name=g7337.t1 NODE_528_length_21764_cov_38.9786 . five_prime_UTR 13967 14121 . + . ID=g7337.t1.utr5p1;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . exon 13967 14223 . + . ID=g7337.t1.exon1;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . CDS 14122 14223 . + 0 ID=cds.g7337.t1;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . exon 14462 14801 . + . ID=g7337.t1.exon2;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . CDS 14462 14801 . + 0 ID=cds.g7337.t1;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . exon 15089 16050 . + . ID=g7337.t1.exon3;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . CDS 15089 15822 . + 2 ID=cds.g7337.t1;Parent=g7337.t1 NODE_528_length_21764_cov_38.9786 . three_prime_UTR 15823 16050 . + . ID=g7337.t1.utr3p1;Parent=g7337.t1 #PROT g7337.t1 g7337 MSDESEGYNGPPYKIPWTLDELYAHYPGKDVRVEQALNIVQLVIGDKDAKHNSLRLEAMELMFEALLDWYPPSFRIEAETLLNAFAEIVWSVKPADHKLLAKRLKQLSKIRSAEESKEEIRDWERLLTEEYFKGKRVGLVDIYSACCPFAYIFLRGRNQSLDDERDPYPEYTPPIKTEPQTETATHLRRPAPQPPPSKPAATKPAVKPISRSTPATAATTTHSDVTTTKGKKHALVDTSDTPAALQSPAKRAKTVTGAAPASTHAISSMQPGGTSVTNDGLDESSWKEPDSVHNNNNDDWGDSGHMDHPNDGHDHQQHEAKELNTHDKVAGKAVASDTYRAVEDKERFRPSGSDMAEGAGRQRGGHAWTHSTCSPTWSCIVAVAIFSLSQQ* # ORIGINAL: g7335.t1 original gene structure, not modified by PASA NODE_528_length_21764_cov_38.9786 AUGUSTUS gene 3354 7908 . - . ID=g7335;Name=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS mRNA 3354 7908 . - . ID=g7335.t1;Parent=g7335;Name=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 7811 7908 . - . ID=g7335.t1.exon1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 7811 7908 . - 0 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 7154 7377 . - . ID=g7335.t1.exon2;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 7154 7377 . - 1 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 6739 6993 . - . ID=g7335.t1.exon3;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 6739 6993 . - 2 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 6361 6504 . - . ID=g7335.t1.exon4;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 6361 6504 . - 2 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 6134 6231 . - . ID=g7335.t1.exon5;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 6134 6231 . - 2 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 4737 5856 . - . ID=g7335.t1.exon6;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 4737 5856 . - 0 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 4471 4579 . - . ID=g7335.t1.exon7;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 4471 4579 . - 2 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 3923 4114 . - . ID=g7335.t1.exon8;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 3923 4114 . - 1 ID=cds.g7335.t1;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 3354 3627 . - . ID=g7335.t1.exon9;Parent=g7335.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 3354 3627 . - 1 ID=cds.g7335.t1;Parent=g7335.t1 #PROT g7335.t1 g7335 MLIVLCAAAFVGAYVVVRGDAPSTWTMPWSTQPSALGPLSAHTHASHPARDTFDDDVLYGVIVDCGSSGSRVHVYRWPAPAIDDLGIAQIEPLALDDGRHVIMKVEPGLSSFIDSPEDAFASIAKLLDYASANVPTRMHHRTPLYIYATAGMRLVDTGARQTLLSIVARNVMRRYAFVFKESHLEVISGRLEGLYAWLAVNYALGRFNHSGGHVMPTVGMLDMGGASAQITVEVDSELPLGDVIPVEIGCSQHNTQHRYNLFIATYLRYGANEARSRYVSEKIEETLLRMNATAVFSNVDADIPPLKNAAPKDEAPKGDEGVREAAAVVESNERPNVNKGDAAHVEEAQDGATEGRPNGVRDGVLDGVQDGVQEVGDATGDAGGDAEEGAGEKVRPLRRRLDREHDVPAGEGDGDEGARPLPDAAVKKARLPLLARKNGRAVSVNGLSGGVDDGGSLGSGGRRPIQDATERRLGDGANAAEGGLRGDNGDDLSRGAELDNRRLLRDSGSIPSRGQREKEKHAGSVDNRGGFGGSGEDGRSYDGDGVGGGARRLASIEDKGMLETSLEEEEGGEEEREGSVTAGSAAAAVSIADPCLISGYVESHTHARGVFHFVGTGDFVTCAQDVREFLRVSLDCPRDTRCTLLKDNQRMLDFGDREYFGFSEYWYTVYDVFEMKSPYHFETFRERAMEFCGRNWTEVAAEFEAGRYPHSSALRLRSQCFKSAWMTSMLHDGFGLPPAGSIIPSKVINGQAVQWTLGAMLMVERLVRAETNADGGILPRGLRATVGPVHYSRLDAFSWRDGVAFVGCLALVAVAVAAVLLCAGRRNRRGWSSMSMV* # ORIGINAL: g7334.t1 original gene structure, not modified by PASA NODE_528_length_21764_cov_38.9786 AUGUSTUS gene 129 3034 . + . ID=g7334;Name=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS mRNA 129 3034 . + . ID=g7334.t1;Parent=g7334;Name=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 129 298 . + . ID=g7334.t1.exon1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 129 298 . + 2 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 426 521 . + . ID=g7334.t1.exon2;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 426 521 . + 0 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 805 967 . + . ID=g7334.t1.exon3;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 805 967 . + 0 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 1440 1618 . + . ID=g7334.t1.exon4;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 1440 1618 . + 2 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 1723 1827 . + . ID=g7334.t1.exon5;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 1723 1827 . + 0 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 1967 2402 . + . ID=g7334.t1.exon6;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 1967 2402 . + 0 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 2597 2681 . + . ID=g7334.t1.exon7;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 2597 2681 . + 2 ID=cds.g7334.t1;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS exon 2875 3034 . + . ID=g7334.t1.exon8;Parent=g7334.t1 NODE_528_length_21764_cov_38.9786 AUGUSTUS CDS 2875 3034 . + 1 ID=cds.g7334.t1;Parent=g7334.t1 #PROT g7334.t1 g7334 AVSACVVLPKPHDLFNPAHPKDLQPFGLLRRFVAAENGSTAAGDDGVVVRLKRRKLSSRFDELEGDGSLLGGVEDALQDIRDSGFGSEAHGISGKGKLSSSAANASADGLSEVELLRKEVARLTEQNARWVASANQLVAAPAESLQSSEESESGLASPTDDASAIQSDSIAGELVRAFQFSDCNISDDEDAQEDSLSVLVNEVLDPNYGLYVWPSAVCLAQHLWNVRASIRGSHIVELGAGTGLPGVLAALMGASSVVLTDLHSPPRVLANLAKTCALNGLLTATAATATLPTTTILPTTTTLLRGRCSSDTDTIEEPSSARERALLRPHEEGDARHSTALTSNAVARIVSVTWAEYTPALIALAREKPDIIIGADVFYDTKLFDDLCATIHLFFRHNPACRFIVAYHDRGSELALYDAFDRWDFNWTEVDADDCRNVWIDDGCPGITSVRLFVISRQNANSG* # PASA_UPDATE: g7336.t1, single gene model update, valid-1, status:[pasa:asmbl_7976,status:12], valid-1 NODE_528_length_21764_cov_38.9786 . gene 9389 13656 . + . ID=g7336;Name=g7336.t1 NODE_528_length_21764_cov_38.9786 . mRNA 9389 13656 . + . ID=g7336.t1;Parent=g7336;Name=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 9389 9494 . + . ID=g7336.t1.exon1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 9389 9494 . + 0 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 9706 11761 . + . ID=g7336.t1.exon2;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 9706 11761 . + 2 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 12060 12195 . + . ID=g7336.t1.exon3;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 12060 12195 . + 1 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 12620 12733 . + . ID=g7336.t1.exon4;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 12620 12733 . + 0 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 13024 13160 . + . ID=g7336.t1.exon5;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 13024 13160 . + 0 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . exon 13388 13656 . + . ID=g7336.t1.exon6;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . CDS 13388 13595 . + 1 ID=cds.g7336.t1;Parent=g7336.t1 NODE_528_length_21764_cov_38.9786 . three_prime_UTR 13596 13656 . + . ID=g7336.t1.utr3p1;Parent=g7336.t1 #PROT g7336.t1 g7336 MVSLGTSLAQATKDALGSTFDDWADLSAPRTVTVKVMEARGLLAMDINGLSDPYCKVSIGTRLERSSVKWNTLEPHWDETFEFPVDEGDRYLTVEVWDRDQVQDDFLGRVMLPIACLPVGPCDAEWHPLGRARRKYSVSGDMKVAAWVNVRDPRHDVADSELRSLCRRKRLNIAVQTNQGPVELPGVHESVEMCVDEVLVDIGGRRLMGLVYVTNFRLIVASEESLYAVKVPGGGVGGVGSGPTAPVSLPAIASVNVDSLLDTVHSIPFGSIMDIERRTEYIVGRVITGETTRREARSLIIRCSDFRTVRLIFASTDREYEILRKRIKFHVCNARYHPITHSVVRSNPHLASVGWGVYSVDAEVQRMRVPEDVFKVTDINADYSFSPTYPARFIVPVGIPDDVLVDSASFRSKGRLPVLCWYNARRGNCMVRCAQPRTGTTGKFSVGDERLIERYRLSASASVRSANPTPPLTPSTSTLNLAQVAAGNAVPVTTTATGPADPSRDAAAGIGSHPVLTGPMSGHLVIFDARSMIASAGNRLKGKGTEDTVNRYAKCKMLFLDIANIHAMRESIDLLMAACSNGTDANWLSAVENTQWLQHAKSLLSASSLIARYLDEKGCSVVVHCSDGWDRTSQLVSLAQLLLDPFYRTTRGFPVLIEKEWLSYGHKFRDRFGCHEMPGDRAPIFLQFLDCVWQILGQFPQAFEFNAAYLLSIAEFCDAGWFGTFLYNCEKERSGRDVSHTSVSLWALLEANTDSFLNRNYEPYPKMLVPIWSLKKIQLWSEYFLRYDDMHYSARASLEDADDTISLQQADDAKASGSVNVVMWVPDHKASVCYDCLMKFTQIRRRHHCRACGQVFCSECVKHRLALPHLGYGSEEKVCDSCFRKHKTGTTPSVPVVARTASGRLPTGQTGDTDSIVT* # PASA_UPDATE: g3528.t1, single gene model update, valid-1, status:[pasa:asmbl_5903,status:3], valid-1 NODE_3337_length_3699_cov_35.9186 . gene 176 3083 . + . ID=g3528;Name=g3528.t1 NODE_3337_length_3699_cov_35.9186 . mRNA 176 3083 . + . ID=g3528.t1;Parent=g3528;Name=g3528.t1 NODE_3337_length_3699_cov_35.9186 . five_prime_UTR 176 438 . + . ID=g3528.t1.utr5p1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 176 551 . + . ID=g3528.t1.exon1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 439 551 . + 0 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 793 881 . + . ID=g3528.t1.exon2;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 793 881 . + 1 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 1232 1370 . + . ID=g3528.t1.exon3;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 1232 1370 . + 2 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 1490 1607 . + . ID=g3528.t1.exon4;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 1490 1607 . + 1 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 1886 1961 . + . ID=g3528.t1.exon5;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 1886 1961 . + 0 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 2374 2531 . + . ID=g3528.t1.exon6;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 2374 2531 . + 2 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . exon 2789 3083 . + . ID=g3528.t1.exon7;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . CDS 2789 2899 . + 0 ID=cds.g3528.t1;Parent=g3528.t1 NODE_3337_length_3699_cov_35.9186 . three_prime_UTR 2900 3083 . + . ID=g3528.t1.utr3p1;Parent=g3528.t1 #PROT g3528.t1 g3528 MATRDLGAARQSYAAGNVEASMAAHSAAKSTSTEAHQKGAGEYIKAIVFGGLDGIVTTFAVVVAAVAAGMSRDTLLILGFANLLGDAAAMSVGDYVSGKAENDHAIAEREREKWEMQHKLEEEKEEMRNIYLQKGLSEDQAREIVDLLLENPDVFLDIMMMEELGIMPISAEQAPWKSAAFTFGAFIVFGGVPMLAYICAGDYKKEGALDTVFWIAVALFCISLFGLGAYKGVVSNSGWLKSGMIMLINGGITTAGAYFIGDQLSKI* # ORIGINAL: g3425.t1 original gene structure, not modified by PASA NODE_4448_length_1602_cov_36.4761 AUGUSTUS gene 382 1490 . + . ID=g3425;Name=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS mRNA 382 1490 . + . ID=g3425.t1;Parent=g3425;Name=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS exon 382 471 . + . ID=g3425.t1.exon1;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS CDS 382 471 . + 0 ID=cds.g3425.t1;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS exon 719 846 . + . ID=g3425.t1.exon2;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS CDS 719 846 . + 0 ID=cds.g3425.t1;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS exon 982 1108 . + . ID=g3425.t1.exon3;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS CDS 982 1108 . + 1 ID=cds.g3425.t1;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS exon 1293 1490 . + . ID=g3425.t1.exon4;Parent=g3425.t1 NODE_4448_length_1602_cov_36.4761 AUGUSTUS CDS 1293 1490 . + 0 ID=cds.g3425.t1;Parent=g3425.t1 #PROT g3425.t1 g3425 MMMMETAVHALDFSRDGEMLASASQDGKIKVWKVATGQVLRKFDQAHTQGITAVRFSKDGGQLLSSSFDGTIRIHGLKSGKMMKEFRGHSSYVNDALYTPDGTQVLSASSDGTIKLWDVKTAECTGTFRITVGSGMSDVTVNSIAFLPHNTENFVVCNRTNTLHVMNMQGQVWIVCIPAV* # ORIGINAL: g7642.t1 original gene structure, not modified by PASA NODE_1677_length_9815_cov_51.0106 AUGUSTUS gene 273 4357 . - . ID=g7642;Name=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS mRNA 273 4357 . - . ID=g7642.t1;Parent=g7642;Name=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 4036 4357 . - . ID=g7642.t1.exon1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 4036 4357 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 3741 3838 . - . ID=g7642.t1.exon2;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 3741 3838 . - 2 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 3386 3607 . - . ID=g7642.t1.exon3;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 3386 3607 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 2951 3162 . - . ID=g7642.t1.exon4;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 2951 3162 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 2667 2733 . - . ID=g7642.t1.exon5;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 2667 2733 . - 1 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 2325 2419 . - . ID=g7642.t1.exon6;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 2325 2419 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 2069 2210 . - . ID=g7642.t1.exon7;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 2069 2210 . - 1 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 1737 1824 . - . ID=g7642.t1.exon8;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 1737 1824 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 1440 1623 . - . ID=g7642.t1.exon9;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 1440 1623 . - 2 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 1072 1255 . - . ID=g7642.t1.exon10;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 1072 1255 . - 1 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 604 739 . - . ID=g7642.t1.exon11;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 604 739 . - 0 ID=cds.g7642.t1;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 273 382 . - . ID=g7642.t1.exon12;Parent=g7642.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 273 382 . - 2 ID=cds.g7642.t1;Parent=g7642.t1 #PROT g7642.t1 g7642 MFSSAQPKTPSHYGRRSNATGFSHTPQQHRGHSAAATPTAHLGTPLSFGGRHSPNVSAATPTRNIFSPYGGNVTPVRAAAGQPARHRIELVSALPAQVAEALSEDAANVNNIGGRVDGSGYSWVVSGPYLHLWPCETPRGFYASTAQRLTLPGQDCTAALTAVVIGRDGSHASFLACSPAGTLRLWSDISSNAHREASLALPEGVSARKIVIVSPSTAIVAAACGRLWRVRIPSLASAEIAGASGMLAGIGRRFSTILGMPSGGASYGVNSLRGACAGGQDGGVRELFVLTDTLLQRWILDDNLEEKMWETNILEDISTRLGLDPARDSLATVDVEISGDDLVVLAISGNARDGFRFHVLWTAVAVADFSSAATTEFDADPREQLSSTAHGFKLVTASGSGHVYVHSPFSAYAVSVTGDGTAQRLSIGGEGGDVIVGGGVIGGYAGDRRGPRPVFISAAMGLISAVSETSQAPQSISAVTTPRPVSSAMKRPLATPDASQRPARQSYAPPSAARNASTLQPTDDKLVTAFSFFLAGNQAAAKNFAETFLRSASSVDVDSAALSLGADVLDTEPSSDVRWAEGRSDLSSAAPLVIRQQLDEKRTRHTEFVSFLTFVGALDQ # ORIGINAL: g7643.t1 original gene structure, not modified by PASA NODE_1677_length_9815_cov_51.0106 AUGUSTUS gene 5029 9465 . + . ID=g7643;Name=g7643.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS mRNA 5029 9465 . + . ID=g7643.t1;Parent=g7643;Name=g7643.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS exon 5029 9465 . + . ID=g7643.t1.exon1;Parent=g7643.t1 NODE_1677_length_9815_cov_51.0106 AUGUSTUS CDS 5029 9465 . + 0 ID=cds.g7643.t1;Parent=g7643.t1 #PROT g7643.t1 g7643 MMATHIQHSGANNSVQYAGNAQCVHPHVSAHLRSVVRLFNTRAVAKDVIGDFPRVFALARACVHSIAATGARYSTASSSTASSSSALSSEAAVALIASKLREWTEFCKWIHAILGVGSPMSPGAAVCVTPTQCAQIAVEAELFCTMLSPLVRKWTAHVTGRVFSDASAQSQAQLALLKIRLDVLHLACLLSSVAPVIRTRGKASSGDDMLGAIDGIVQRNVLDLIVDLVLLFLDCRGAVHASPGGAAAAALEGAWIRAYSAMSLCGAAPEESFWAAVNATVLALDPSSGVPCGLKGEYSTQPLITGRPEWAEFAWDLVLFVARAVSGGIDHRGTARNDHVRTTGNWTLVERLVGLGLASGTSSPQTLRASFIRILSLSLRWTAHLQLVELIWDSLRKNRLEEAPGCGDQSLALPPILEPSSPEFVLLPTCTAASIASASSSDTPFVLFLRIVLVMLRAEGGRAVQDNDSAESRIVAKFISRFLLTFPKISYFVGADASSHNVPSNPHAQPSAASRSSLRNYASLIIALCCVGSSSHRRQIASRFGLMLDWSHSDDAAREFYIAALLALASTLVTGGGTDIDLPCGFIADIGSALRGELLRGGHGKLVIRQTTSLLTGCTDLMRRCAAAVKAQGAQGVACLLIACKTALPLTLGFFDYIREIPDELRRPSALLVSEVCGILLTDCVARATGMRALCPHAAATVTHTVTTASEGAACGSEIYDDSIFTCPELDQIMESAEGTLPHAGNEADDMPRAHADTIVGHVDAAASSLFGAFDALSQFVRMRPKYASGLVVGALASAANVCVRVCECVPETRLKRIRPSESRITWPYIASILGPASAWGNVKVNSACERRPLVLQVWTKLLPLVTPASACPFMDAGAAFGMWCAFIGDPRCGQSDVACFSLELARRMPSFARLFASNVDPSGPVGAMDVLSRLLVTPEAPAATARRLCRSLEARLVVLSSFLRGSATLPRTENADKWVADVATSVGVVSGAVASAQATEDSSAKTTAAESYAAFSLRLCAIVFDCCALMLSSTGKTPVLTRLVSDTCHAHLAPSLGAGFKVLEGPDSQTAVDVVEQWICSILRGATAVTATLSKNSAVINSLNGVVSSAVRVVLDMEQRGGDDHSNLLVKSRLKTTAVTLARDVGSSLRLHIADSIVRHYSQVLVYETREDALLEPLSPEYERAVAPKEAAAGETAARVVALAQFVLLEILELPVPNAESATAAIAAFEDCLRPFAPFLAAIACYFMRYSPGQRPFYVAARAAEQHASALAKYAELPAAPEGSVFVAFGKAMCAVILREIQIAVRNQADAPAAILSHQTASADLEHFRSIVGELSAACGERAVRRSSFLFAPASAQDAHTSGDLLSDSAGGRVFIRRQMRLHAQQRVVGGRPGPVHAPAPGQKPSSGAAWMALSSMAQHPWLKATVVDIVSSLHGVLSTDTASTQQQQQQQQQQQQQPRRRMFVTEFAKLLASVTS* # ORIGINAL: g13058.t1 original gene structure, not modified by PASA NODE_1680_length_9781_cov_35.0084 AUGUSTUS gene 4721 9468 . - . ID=g13058;Name=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS mRNA 4721 9468 . - . ID=g13058.t1;Parent=g13058;Name=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 9337 9468 . - . ID=g13058.t1.exon1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 9337 9468 . - 0 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 8925 9104 . - . ID=g13058.t1.exon2;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 8925 9104 . - 0 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 8444 8608 . - . ID=g13058.t1.exon3;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 8444 8608 . - 0 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 7975 8076 . - . ID=g13058.t1.exon4;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 7975 8076 . - 0 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 7565 7697 . - . ID=g13058.t1.exon5;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 7565 7697 . - 0 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 7180 7330 . - . ID=g13058.t1.exon6;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 7180 7330 . - 2 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 6881 6999 . - . ID=g13058.t1.exon7;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 6881 6999 . - 1 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 6407 6589 . - . ID=g13058.t1.exon8;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 6407 6589 . - 2 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 5866 6093 . - . ID=g13058.t1.exon9;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 5866 6093 . - 2 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 5296 5665 . - . ID=g13058.t1.exon10;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 5296 5665 . - 2 ID=cds.g13058.t1;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 4721 5045 . - . ID=g13058.t1.exon11;Parent=g13058.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 4721 5045 . - 1 ID=cds.g13058.t1;Parent=g13058.t1 #PROT g13058.t1 g13058 MARRSISKEDLNVASEGDRNVAFSPNVAAFNAEGSKEELPLAEEGAAVSVVDLITSDSQVTITFEELSYSIDVEKPRSFKERLSCKRAEYEEKFLLKDVTGAIKPRQMTALMGPSGAGKSTLLDVIAGRKNSGVITGSLLFNGRERTHEFKRVCGYVEQADILLGSLTVRELLTFTARLRLSKTFPEDMRMKRVEEVIDQLGLKGCADVLIGDGKQRGISGGQAKRVNIGVELITSPSMLFLDEPTSGLDSSTAFDVMKVARHICDAGTTVICTIHQPSSDIFRLFDRLLLLVAGEVVYLGSAMDAPTYFQNLGYVLTENMNPADFIIEVTSDHSSGHKLVEGPDVDRHFFAETYKKSALADLRKISTKRATETGPKTLKEDEPLFINDALYNMRVLFDRQVAKGRRDPGFFGRRVLMPLVVAVILALVYRDSPFSQQGVRNRQALIMLMVNYFTLGANQMIGPLMAERLFFTRERASASYQVSSYYLSILLFEFPFAVIKALIWSIILYWSVGFYPEPGNFFFFCLIIVLLADMGNAMAQFFGAIAPSFEAGAAAMTTFPLMFTIFSGFYIKKANIPTPWIWAYYISYCNYAVAALIFNEFKNQDKYFLVDTYCFQPANVTAAYCPLDPSSPAACASTLTAETPWPPSEVLAYLGAPTGFFDNAYTNLFLFIVIWFAIRVVAYLALRFKRHGSR* # ORIGINAL: g13057.t1 original gene structure, not modified by PASA NODE_1680_length_9781_cov_35.0084 AUGUSTUS gene 349 3734 . + . ID=g13057;Name=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS mRNA 349 3734 . + . ID=g13057.t1;Parent=g13057;Name=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 349 1359 . + . ID=g13057.t1.exon1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 349 1359 . + 0 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 1550 1924 . + . ID=g13057.t1.exon2;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 1550 1924 . + 0 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 2083 2369 . + . ID=g13057.t1.exon3;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 2083 2369 . + 0 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 2505 2659 . + . ID=g13057.t1.exon4;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 2505 2659 . + 1 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 2803 3008 . + . ID=g13057.t1.exon5;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 2803 3008 . + 2 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 3200 3367 . + . ID=g13057.t1.exon6;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 3200 3367 . + 0 ID=cds.g13057.t1;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS exon 3540 3734 . + . ID=g13057.t1.exon7;Parent=g13057.t1 NODE_1680_length_9781_cov_35.0084 AUGUSTUS CDS 3540 3734 . + 0 ID=cds.g13057.t1;Parent=g13057.t1 #PROT g13057.t1 g13057 GCFVVFGLIARNGSPQLESVDRCLHVVFVLLPLLCALGTLPQLDALFGYAAEQVLVHLFGGSYSSDDASLVVAFLLSGTAFVVSVIVHAYWSTVAAFVFAASAGCLLAHDVHGALIAVTKLVPDAPAVTSSNARPSGIIHHVITAALVIIAGIAGGLLRHAYETQPSSLRDVRTAFDVIVCVLMSLFVLVPLLTRPYLPLLALRNPVARLMRPKGIGRRVTGTVYSAAESYVAPIFLTCYASLFSGRSGTAATEFVFAAGFAYALRIAWQRPTRASLVFVVGAVVMPRGIVASGSAHVWWEELTLGVQLLIAGVCVDRFFEFCDKIVFVGTHLITTATQKKQRFPLAIPFVVASALLSPVILGVVLIATILSAPLLPLFGIPLFFVAYPRPRRQWPTASARYTANGDSQYYAQVLPSALLSLSRAFNCGTLGDAQPGAFFLLRFQNKLVWVQVLEAGRGFRKISVKGLELQETSCHTVEAARIDDIIAASQGTDKVALDPLNALTPIDSVSVSAYSDARNVLTGIIDQPRNLKLITSSYLKTLVWVLARRTEAEFPERWREIPLDSYELEQFVSRFPLKWYQHIRPSATGQKDPLVPLVLAVYAVVDSLGIAGGDAATEGPEHIFKTYTGQIPTSSHADWLKEDNELRALALTAYRLAFRLVYDQAVIGDIASLDELRDNLVDYETNCYVGVEGERQWSDAVSTARPMLFSIGCDKEKGQYSGRVLTLQEMPAEVGSLNSEVIRGIWASLSFELMYLTNDDDERFSIQAHKTLLRNIVVQSAAPPLGYPIFCSDVVTV* # PASA_UPDATE: g6608.t1, single gene model update, valid-1, status:[pasa:asmbl_1038,status:3], valid-1 NODE_1271_length_12531_cov_39.012 . gene 6223 10470 . - . ID=g6608;Name=g6608.t1 NODE_1271_length_12531_cov_39.012 . mRNA 6223 10470 . - . ID=g6608.t1;Parent=g6608;Name=g6608.t1 NODE_1271_length_12531_cov_39.012 . five_prime_UTR 10303 10470 . - . ID=g6608.t1.utr5p1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 10244 10470 . - . ID=g6608.t1.exon1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 10244 10302 . - 0 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 9746 9978 . - . ID=g6608.t1.exon2;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 9746 9978 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 9497 9611 . - . ID=g6608.t1.exon3;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 9497 9611 . - 2 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 8792 8941 . - . ID=g6608.t1.exon4;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 8792 8941 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 8439 8627 . - . ID=g6608.t1.exon5;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 8439 8627 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 7973 8108 . - . ID=g6608.t1.exon6;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 7973 8108 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 7449 7667 . - . ID=g6608.t1.exon7;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 7449 7667 . - 0 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 7134 7231 . - . ID=g6608.t1.exon8;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 7134 7231 . - 0 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 6734 6871 . - . ID=g6608.t1.exon9;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 6734 6871 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . exon 6223 6560 . - . ID=g6608.t1.exon10;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . CDS 6482 6560 . - 1 ID=cds.g6608.t1;Parent=g6608.t1 NODE_1271_length_12531_cov_39.012 . three_prime_UTR 6223 6481 . - . ID=g6608.t1.utr3p1;Parent=g6608.t1 #PROT g6608.t1 g6608 MVYETRRKPTSTSRGGKKPSGSLYVGYVEDEESIESIMKKFEELQRLQAETKLVEDEPPRNKGKGKYVDPETTLSDAQLEELFKRTSSFTVRSVSDYGAALNLLESEMDIDAVDGHTLAMLMDESDDSDDDDYNEDYYGEADEDFFDSEFGSSGRGHKRRRSSGAKAPRMPKEKRPRYDREAILQKYRNLHLQDAEGRQIIVKKKIRQTDPRLPAYTRIPSLPIPKSWASTIITIAAMKKRPEIPLGSKYIEAPLLTADLPSLCGGGYQAILMDPPIVLPGQEKLPGMIDVGDLEKLKIDDALIPAGFIFVWIDKLFFPDLVRILGTWSFTYVENICWVRLLANNKYAHEDADYFRRSKLSCFIFRKYNTSGDGNNEQIELRHQRNPDAVFDFIKPRESLLDKEGLYQPEEKPQFVYDVVETLLPDAVYKRATDTQKERPGRILELWGQRDRRREGWVSLVNSRESPSTQA* # ORIGINAL: g6606.t1 original gene structure, not modified by PASA NODE_1271_length_12531_cov_39.012 AUGUSTUS gene 154 3466 . + . ID=g6606;Name=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS mRNA 154 3466 . + . ID=g6606.t1;Parent=g6606;Name=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 154 289 . + . ID=g6606.t1.exon1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 154 289 . + 2 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 569 750 . + . ID=g6606.t1.exon2;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 569 750 . + 1 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 990 1130 . + . ID=g6606.t1.exon3;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 990 1130 . + 2 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 1377 1523 . + . ID=g6606.t1.exon4;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 1377 1523 . + 2 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 1766 1812 . + . ID=g6606.t1.exon5;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 1766 1812 . + 2 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 2077 2188 . + . ID=g6606.t1.exon6;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 2077 2188 . + 0 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 2555 2643 . + . ID=g6606.t1.exon7;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 2555 2643 . + 2 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 2835 2956 . + . ID=g6606.t1.exon8;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 2835 2956 . + 0 ID=cds.g6606.t1;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 3193 3466 . + . ID=g6606.t1.exon9;Parent=g6606.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 3193 3466 . + 1 ID=cds.g6606.t1;Parent=g6606.t1 #PROT g6606.t1 g6606 IDAAIKLYLKAILVSTLPEVAVYALALIHTHEANSDFEGALHVIRFGISFCPIFLIRGLHLPSEFYSAHPSASVGGVTCADILSLLNDCQSNGDCNDVNSDERSEAIAKAVSAKKTPYTSFSLDLLAIHLTTVKVLYVTGRLSGLRRLCSTLGEMTSGRGLHLTLIRNEFAYFECIDGLVGPLASSRKDPAGVPARIVHVIGDSHCLVPAWSTFQVKGESFRAKPHLVTGLKMWHLRPESTFFTKNNFHSAVNEVPVEALAVFVCGEIDCREGLLSAVGMCKYDSIESAAEIAVGHYLDAVRAVVVERRLRAAIHPIPPVLEETRPIVLAVNAITRRRCADYGLHWLDFESSLVAPTSSASPVAASASPAAPVNATTNQPCHVGLRPEYAMDGTHLHPRYVALLAHALEAVPDVA* # ORIGINAL: g6609.t1 original gene structure, not modified by PASA NODE_1271_length_12531_cov_39.012 AUGUSTUS gene 11156 11802 . + . ID=g6609;Name=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS mRNA 11156 11802 . + . ID=g6609.t1;Parent=g6609;Name=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 11156 11198 . + . ID=g6609.t1.exon1;Parent=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 11156 11198 . + 0 ID=cds.g6609.t1;Parent=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 11323 11649 . + . ID=g6609.t1.exon2;Parent=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 11323 11649 . + 2 ID=cds.g6609.t1;Parent=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 11792 11802 . + . ID=g6609.t1.exon3;Parent=g6609.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 11792 11802 . + 2 ID=cds.g6609.t1;Parent=g6609.t1 #PROT g6609.t1 g6609 MYAAVMLAALLLCIGAVHARSVVLSTVDQNRILVLWTANEVDGLTNVTAGILPRVSLYPFGNVTGAPSVVTNSRGEGLSYGQINAEIGLVDGLASGTPYVASVQYCSFGLCDQPAFSAAGMTRAME* # ORIGINAL: g6607.t1 original gene structure, not modified by PASA NODE_1271_length_12531_cov_39.012 AUGUSTUS gene 4455 5195 . - . ID=g6607;Name=g6607.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS mRNA 4455 5195 . - . ID=g6607.t1;Parent=g6607;Name=g6607.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS exon 4455 5195 . - . ID=g6607.t1.exon1;Parent=g6607.t1 NODE_1271_length_12531_cov_39.012 AUGUSTUS CDS 4455 5195 . - 0 ID=cds.g6607.t1;Parent=g6607.t1 #PROT g6607.t1 g6607 MGVTDVSVLGGVHTLNLSKCQGVTDVSALGGVHLLDLSFCNGVTDVSVLGGVHSLNLSECEEVTDVSVLAGFHSLDLTNCKRVTDVSALGGVHTLKICGCDGVTDLSVLGGVHSLDLSLLSLVKDVSGFSSVHSLNISGCKGVTDVSALGGVHTLYLSRCDGVTDASALGGVHSLNLSCCNRVTDVSALGGIHSLTLAGCEGVTDVSALGGVHTLDLTNCKRVMDVSALDVLRSLILHNVKTYFEP* # PASA_UPDATE: g13718.t1, single gene model update, valid-1, status:[pasa:asmbl_6897,status:12], valid-1 NODE_4043_length_2290_cov_44.5074 . gene 1247 2290 . + . ID=g13718;Name=g13718.t1 NODE_4043_length_2290_cov_44.5074 . mRNA 1247 2290 . + . ID=g13718.t1;Parent=g13718;Name=g13718.t1 NODE_4043_length_2290_cov_44.5074 . five_prime_UTR 1247 1409 . + . ID=g13718.t1.utr5p1;Parent=g13718.t1 NODE_4043_length_2290_cov_44.5074 . exon 1247 2290 . + . ID=g13718.t1.exon1;Parent=g13718.t1 NODE_4043_length_2290_cov_44.5074 . CDS 1410 2290 . + 0 ID=cds.g13718.t1;Parent=g13718.t1;3_prime_partial=true #PROT g13718.t1 g13718 MGIPPRNTTIGVWKCIRAMMALPSRFCVSLGRPMPSGLVRLSVRGHVEPTFSPLSLQHTLLALRVTGVRLFSRALHPTATEVALANKSCTTASEDALSSETKKRGSFALFKGTNLYADARKALEGSTRTYVYRKSGVPRAKPRNYLEELRAYYLQNCHGPPVSVRTSLNFTMQDDRRIVELIKEGKGWADIGRELGKSKDAILVRCQISLDPRVRHGTFTEEEDAAILAHVSEHGEGKWTELSTKMGHSRSGKALKKRYTFALRPDHKKGSWSDDERRRLLEGIVKHGRDWTA # PASA_UPDATE: g13717.t1, single gene model update, valid-1, status:[pasa:asmbl_6898,status:12], valid-1 NODE_4043_length_2290_cov_44.5074 . gene 1 1063 . - . ID=g13717;Name=g13717.t1 NODE_4043_length_2290_cov_44.5074 . mRNA 1 1063 . - . ID=g13717.t1;Parent=g13717;Name=g13717.t1 NODE_4043_length_2290_cov_44.5074 . five_prime_UTR 1030 1063 . - . ID=g13717.t1.utr5p1;Parent=g13717.t1 NODE_4043_length_2290_cov_44.5074 . five_prime_UTR 846 846 . - . ID=g13717.t1.utr5p2;Parent=g13717.t1 NODE_4043_length_2290_cov_44.5074 . exon 1030 1063 . - . ID=g13717.t1.exon1;Parent=g13717.t1 NODE_4043_length_2290_cov_44.5074 . exon 1 846 . - . ID=g13717.t1.exon2;Parent=g13717.t1 NODE_4043_length_2290_cov_44.5074 . CDS 1 845 . - 0 ID=cds.g13717.t1;Parent=g13717.t1;3_prime_partial=true #PROT g13717.t1 g13717 MTPTFRLWRACATHVQAHTLATTIVCMRPCHASASTDLHLLKVRAHAGRVHFHSDASSSTRHPSKVVTARQPSRVSDKINTKTSSTAVPLKRSSFAAFSGTKLYEDAQRALEESPRTTIRRKSAVPRGTSCKFSSELRAYYVENNANPVVAAKDSRLFTMEDDRRIVELIKEGKGWTDIARALGKNKDTIFVRCQSTLDPRLRFGSFTEEEDAAILAHVSEHGEGRWTELSAKMGHSRCGMALKKRYTFALRPDRKMGSWSDDERRRLLEGIVKHGRDWTA # ORIGINAL: g6820.t1 original gene structure, not modified by PASA NODE_3472_length_3391_cov_42.9216 AUGUSTUS gene 2357 3085 . + . ID=g6820;Name=g6820.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS mRNA 2357 3085 . + . ID=g6820.t1;Parent=g6820;Name=g6820.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 2357 3085 . + . ID=g6820.t1.exon1;Parent=g6820.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 2357 3085 . + 0 ID=cds.g6820.t1;Parent=g6820.t1 #PROT g6820.t1 g6820 MMTSSLSATPRGLNRAVFAAFKAHGLSLKTDAMRLLIEALANVAEDEVHESLETIITSLEKEPLQSNIIEHDEVKRVIDALVRASEEGDNPTAAILRHFSVIDAFEVPNLVYNVDRKTFYPSGGSPSGMGSLSTAPSASASCAHASADAKTAMFRERYALLRQRILRNPLFVPPVVGGGASDYYKLTPIESLIGSAEATESICVFGMLSQMEEGRFFIEDPNGSIPLDLSEAISNPNFSSRT* # ORIGINAL: g6819.t1 original gene structure, not modified by PASA NODE_3472_length_3391_cov_42.9216 AUGUSTUS gene 39 1897 . - . ID=g6819;Name=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS mRNA 39 1897 . - . ID=g6819.t1;Parent=g6819;Name=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 1777 1897 . - . ID=g6819.t1.exon1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 1777 1897 . - 0 ID=cds.g6819.t1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 1480 1549 . - . ID=g6819.t1.exon2;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 1480 1549 . - 2 ID=cds.g6819.t1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 1136 1347 . - . ID=g6819.t1.exon3;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 1136 1347 . - 1 ID=cds.g6819.t1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 926 978 . - . ID=g6819.t1.exon4;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 926 978 . - 2 ID=cds.g6819.t1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 589 745 . - . ID=g6819.t1.exon5;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 589 745 . - 0 ID=cds.g6819.t1;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS exon 39 142 . - . ID=g6819.t1.exon6;Parent=g6819.t1 NODE_3472_length_3391_cov_42.9216 AUGUSTUS CDS 39 142 . - 2 ID=cds.g6819.t1;Parent=g6819.t1 #PROT g6819.t1 g6819 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEYNLFQGVRRVVDLCAAPGSWSQVLSRKLRSGNAEEDADVKIVAVDLQAMAPLPGVIQIQGDITKKSTAEQIIGHFDGGLADLVICDGAPDGGINVYSLLVTGLHDIDEYIQAQLLLAALNITTHVLRPGGAFVAKIFRGKDITLLYSQLKIFFGEVACCKPRSSRNSSIDVDFNSLTGPSRFIVPFLACGDLSAYDSDKTYPLE # ORIGINAL: g3216.t1 original gene structure, not modified by PASA NODE_8036_length_391_cov_29.5475 AUGUSTUS gene 1 192 . - . ID=g3216;Name=g3216.t1 NODE_8036_length_391_cov_29.5475 AUGUSTUS mRNA 1 192 . - . ID=g3216.t1;Parent=g3216;Name=g3216.t1 NODE_8036_length_391_cov_29.5475 AUGUSTUS exon 1 192 . - . ID=g3216.t1.exon1;Parent=g3216.t1 NODE_8036_length_391_cov_29.5475 AUGUSTUS CDS 1 192 . - 0 ID=cds.g3216.t1;Parent=g3216.t1 #PROT g3216.t1 g3216 MTSIASGSKVLHITESDVQKLLASHVHLGTKNCSNSMSKYVSGRTKDGVHILDLHATWEKLILA # PASA_UPDATE: g7227.t1, single gene model update, valid-1, status:[pasa:asmbl_1146,status:12], valid-1 NODE_1301_length_12301_cov_41.6292 . gene 325 6454 . + . ID=g7227;Name=g7227.t1 NODE_1301_length_12301_cov_41.6292 . mRNA 325 6454 . + . ID=g7227.t1;Parent=g7227;Name=g7227.t1 NODE_1301_length_12301_cov_41.6292 . five_prime_UTR 325 326 . + . ID=g7227.t1.utr5p1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . exon 325 571 . + . ID=g7227.t1.exon1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 327 571 . + 0 ID=cds.g7227.t1;Parent=g7227.t1;5_prime_partial=true NODE_1301_length_12301_cov_41.6292 . exon 816 859 . + . ID=g7227.t1.exon2;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 816 859 . + 1 ID=cds.g7227.t1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . exon 1145 1352 . + . ID=g7227.t1.exon3;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 1145 1352 . + 2 ID=cds.g7227.t1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . exon 1750 1958 . + . ID=g7227.t1.exon4;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 1750 1958 . + 1 ID=cds.g7227.t1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . exon 2469 2675 . + . ID=g7227.t1.exon5;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 2469 2675 . + 2 ID=cds.g7227.t1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . exon 3038 6454 . + . ID=g7227.t1.exon6;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . CDS 3038 6351 . + 2 ID=cds.g7227.t1;Parent=g7227.t1 NODE_1301_length_12301_cov_41.6292 . three_prime_UTR 6352 6454 . + . ID=g7227.t1.utr3p1;Parent=g7227.t1 #PROT g7227.t1 g7227 DLTSSSTNTPYSFDATGQALALDARSGTVFVGGSNRPAGIGRGSVEAYASTNAFGGSVEMDSTGRDGAYNSASSLLTPNNIRYGDAVVTGALFTSNDIAIGAPRATPPAAYGATSYAKKGFVGRVEIRSVTAVTATITSAIWAAYGEQSGSGFGSSLCVADFNGDGASDLFVGAPMFIGDGQTSDVGRVYVYLAPGRSPNTMSASYSFVLSGTRRGGLFGFAIARAGQTVTQGYDDVAISAPYAALTDDAPVQSETGAVYLYEGRPFPSTASVTAAQTIYGDVVGGLFGYSLSAGADLLSDGNMGILVGQPGFKNGAGRVVALLGLSDVDISVTVTPSVSGLPKFPVDSDFSHNVTIQTVGRGSPFVTVTVTVDANWWPVSREFPAWTGFQCAGTHPTFTCSSLSALGNNSITVLKVITPTLTRTRLAQWVPTVTLSVSVAITTASSASIVDRKLTNNAAMATTPVFALASLDVRFSGTQKYNPSLSTDPKAGVIPLGLSVLELQSMQITNTHPTGTALGVTAEITMPVGMSFSKTDSVAFSAPLFYTNNNGAVLSKANLAAPTISGTSKLVIFVDSLPPSTGLVVSGIRFAVDTYTARTGNFSVGMRLVVDSLGSFLTSGAVSVKLTPPIISENPALVTLALDPSSFSSVDAGTFAAFTFSVTNSKTGPATSIAVQITFDSRLTFIGCSSLSGFICGPVTSNGTRVTCVRSQVLGALAWGQELLTFRVNDDALAYSSASTSSVTLSLSGTYTDVEGVKTMPTVYTSQSLKELVYLYLPPIVFNTGTGAGIPGSTVKGRITIVNDGPSAIPARVAISLTYPSKAVTVSTDPAWTITQGNAQASLPDIVRADATFTLEFTFVVNPVLDWKNRAISFTVLIGSLRLQTTFPAEFRHNIGFADRPTAATVSRQRFVGQPITSRLVVRNLGPNPTQYVSGSTSRSCSLRVTLTASAGTVTASSVPASCSLSTSSASSKVYDCTVPSIAPGNATVIFVFDYSFTALGTGTLTGELTCTPLPASSVAPVSDSDTDPSDNTITHSIAVVPLATLSIDFVDAPPASPIRPFFQLIFRVSNSATGRNAPPATGISLTVAAPSALVAYDATATGAANNPLKVKITPSSGGIVKIDNLSLDAAPADVLVRLTFTQLVLVPGTRVNYTVDFDAAYPNTNAVKRFTSTMVVANATVATRIASSASAEPPNGTIAYNVPLAYVDAVDGPFNAGVVPLSQFTTLVTLRNLGPKLPLGVTSNMTVTLQVNVDSFGQYDTPRHFAQSFGQLPSRAFDSEYYKWKANGTAFGIVAKTAFANFSTEANAVIVPPRGVTCTRPSPLRFVCALPALDFNSVATYALTLDALMYPRVASARVTVSATTEVSPNAPFSLSLDAPAKTNTLCRTIVRSAILFGATAAVPVTP* # ORIGINAL: g7228.t1 original gene structure, not modified by PASA NODE_1301_length_12301_cov_41.6292 AUGUSTUS gene 7749 9475 . + . ID=g7228;Name=g7228.t1 NODE_1301_length_12301_cov_41.6292 AUGUSTUS mRNA 7749 9475 . + . ID=g7228.t1;Parent=g7228;Name=g7228.t1 NODE_1301_length_12301_cov_41.6292 AUGUSTUS exon 7749 8816 . + . ID=g7228.t1.exon1;Parent=g7228.t1 NODE_1301_length_12301_cov_41.6292 AUGUSTUS CDS 7749 8816 . + 0 ID=cds.g7228.t1;Parent=g7228.t1 NODE_1301_length_12301_cov_41.6292 AUGUSTUS exon 9158 9475 . + . ID=g7228.t1.exon2;Parent=g7228.t1 NODE_1301_length_12301_cov_41.6292 AUGUSTUS CDS 9158 9475 . + 0 ID=cds.g7228.t1;Parent=g7228.t1 #PROT g7228.t1 g7228 MTRTTCSVRRMRLALAIVVCSIVVMCVVVSQLADVDVYDFYAHRSDHYDVVALSLPATGATAASVRMVDVSERLMSPKLDAHTQDALAGIPRENRDANTLNEQLRASTHPSIIAYPSRVDAIAHSSVGVEVPRLSERVALLSIAAVAQPLHTASLSPSTNEVSAIHALTALPTPSDTITAPAEAFLIADICQWGQTNQLMALMSAVNLARLLGRSLVEPLLCTLTGKTLALSPLSKYFDVAALSRVLSDCVDVNGRAMACRMVALSEFTQRFGPNAPQIADPSGIPPINANADMGKISGDASLLWTVHCLFFETEYYPPPMPDSMTAPLFGALNSKCGSATAIPRSVESEGARRPLHTRASILRHWHTDWPVTWPVTEEDVSSTSTLAADRFTRANLRELSENHRVHPGAEHSVVAAYWLFGMRLNGMEPSAGPMQLSQLRPRERLVDIASAFIRQFTPWV* # ORIGINAL: g11236.t1 original gene structure, not modified by PASA NODE_951_length_15536_cov_42.342 AUGUSTUS gene 9926 11626 . + . ID=g11236;Name=g11236.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS mRNA 9926 11626 . + . ID=g11236.t1;Parent=g11236;Name=g11236.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 9926 11626 . + . ID=g11236.t1.exon1;Parent=g11236.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 9926 11626 . + 0 ID=cds.g11236.t1;Parent=g11236.t1 #PROT g11236.t1 g11236 MASNADKIRTLKQKQQQWMLERAQTIDRVSSQPRLTGASSTSFASSPSHKQQQQQQEPQQQQQQQQSEQSLHSARRPQQHVSNGGARSLGTKNSTQSSSSPALATHRTNGYQSPAGASAKPRSSANGTNASKRQSPLPTSPNPLLATRRETPSSGPVPSSSQLLGGGRGAAYGGSHVAMDGVANGHSQAYSPYNGGSSAYNSGYGDGHNASPAAVHGGQPDDADVDEIAGRIADRLKLGIRDVLTRESRAAANRTEELAAKMETYIAAETAMYSCPVCEKVMAGAANVPTVVIPCGHTFCEACLGGHARSLSRAQGQQELCPLCRTPIQSRGRNTALMQTIDAFVRRSRQLETDMAPATDAARAMRYSRIVAADGFGGNPRGSNADAARGLNMYDAYSQPGSQRSGGQYSSANYGGSAYGDGDAPNVRAHEQAVRYQSEYRSYSMRCRILQNEYTDGRNACVTIDSRCADLGRAEQALEGEEESVARQIAALERQRADIRSRRDEKKREIDALRQEKDALRKRLSVVRDTLVPLRVQRDKAKLILGNLDASAGGEQDSESDCDLSD* # ORIGINAL: g11234.t1 original gene structure, not modified by PASA NODE_951_length_15536_cov_42.342 AUGUSTUS gene 3754 7090 . + . ID=g11234;Name=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS mRNA 3754 7090 . + . ID=g11234.t1;Parent=g11234;Name=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 3754 3802 . + . ID=g11234.t1.exon1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 3754 3802 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 4057 4169 . + . ID=g11234.t1.exon2;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 4057 4169 . + 2 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 4323 4376 . + . ID=g11234.t1.exon3;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 4323 4376 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 4494 4676 . + . ID=g11234.t1.exon4;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 4494 4676 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 4919 5125 . + . ID=g11234.t1.exon5;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 4919 5125 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 5282 5368 . + . ID=g11234.t1.exon6;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 5282 5368 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 5524 5673 . + . ID=g11234.t1.exon7;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 5524 5673 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 5886 6029 . + . ID=g11234.t1.exon8;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 5886 6029 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 6186 6347 . + . ID=g11234.t1.exon9;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 6186 6347 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 6558 6673 . + . ID=g11234.t1.exon10;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 6558 6673 . + 0 ID=cds.g11234.t1;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 6976 7090 . + . ID=g11234.t1.exon11;Parent=g11234.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 6976 7090 . + 1 ID=cds.g11234.t1;Parent=g11234.t1 #PROT g11234.t1 g11234 MPREIITLQLGQCGNQVGMEFWKQLCAEHGIGPDGMLEDFAVDGTDRKDVFFYQADDEHYIPRAVLMDLEPRVINSIRNSPYASLYNPENIYMSANGGGAGNIWASGYAQGEKVTEEIMDILDRESDNSDSLEGFVLCHAIAGGTGSGMGSYLLEALNDRYPKKLIQTYSVFPNQEEISDVVVQPYNSLLTLKRLALNADCVVVLDNTALNRIAADRQQGQTPSFAAINQLVSTVMSASTTTLRYPGYMNNDLIGLVASLIPTPRLHFLTSGYTPLITDHKTSSVRKTTVLDVMRRLLQPKNSMVSIPTRTGCYISILNIIQGGVDPTQVHKSLQRIRERKLAQFIPWGPASIQVALSKKSPYVQSAHRVSGLMLANHTSIATLFKRTCEQYDKLRKREAFLEQFKKESMFSDDLSEFDSSREVIQQLIDEYKASERPDYVSWGQPQQAPQAQPQQAQA* # ORIGINAL: g11235.t1 original gene structure, not modified by PASA NODE_951_length_15536_cov_42.342 AUGUSTUS gene 7694 9094 . - . ID=g11235;Name=g11235.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS mRNA 7694 9094 . - . ID=g11235.t1;Parent=g11235;Name=g11235.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 9031 9094 . - . ID=g11235.t1.exon1;Parent=g11235.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 9031 9094 . - 0 ID=cds.g11235.t1;Parent=g11235.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 7694 8913 . - . ID=g11235.t1.exon2;Parent=g11235.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 7694 8913 . - 2 ID=cds.g11235.t1;Parent=g11235.t1 #PROT g11235.t1 g11235 MGDEHGGIFGDYSLNLAKSIIGSAVLSLPYVMGECGLLIGCALIFACAYLAQYSLALLGAAGEAAQARGIAVSFEGLAVAWAGRRGRIIVDVTLCLAALGGTVAALHITRDIALESLGMEASDAVAGGVTAGSAIIGSIAACIAALSAMDGMGSFAVVSKIASALYVLFVASLVLCLVDGSHNTVSMDSLWQWKPEGLSACFPIVCYSFTCQMAFFAIFEGASGEARQRTLREIIPMVIWRLVVPFYALVGVCGYFAFGPVPPANILKAMGVTFAHRAVRVAFAFTIVFSCPPSIYPARDAIVSHLTPAQYRGNDDAEGGSPLDNAPTVGMRRQRRMVGVLLTCMALLLAVSVSKLETVFALVGGTTGVLISQVFPAAFFLACVGGDGASEAVARTFGVSITGARALLTFGSVIGIVSTATTLVTRG* # PASA_UPDATE: g11237.t1, single gene model update, valid-1, status:[pasa:asmbl_10099,status:12], valid-1 NODE_951_length_15536_cov_42.342 . gene 12576 15536 . - . ID=g11237;Name=g11237.t1 NODE_951_length_15536_cov_42.342 . mRNA 12576 15536 . - . ID=g11237.t1;Parent=g11237;Name=g11237.t1 NODE_951_length_15536_cov_42.342 . five_prime_UTR 15536 15536 . - . ID=g11237.t1.utr5p1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . exon 14015 15536 . - . ID=g11237.t1.exon1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . CDS 14015 15535 . - 0 ID=cds.g11237.t1;Parent=g11237.t1;5_prime_partial=true NODE_951_length_15536_cov_42.342 . exon 13537 13776 . - . ID=g11237.t1.exon2;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . CDS 13537 13776 . - 0 ID=cds.g11237.t1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . exon 13093 13356 . - . ID=g11237.t1.exon3;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . CDS 13093 13356 . - 0 ID=cds.g11237.t1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . exon 12846 12932 . - . ID=g11237.t1.exon4;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . CDS 12846 12932 . - 0 ID=cds.g11237.t1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . exon 12576 12657 . - . ID=g11237.t1.exon5;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . CDS 12598 12657 . - 0 ID=cds.g11237.t1;Parent=g11237.t1 NODE_951_length_15536_cov_42.342 . three_prime_UTR 12576 12597 . - . ID=g11237.t1.utr3p1;Parent=g11237.t1 #PROT g11237.t1 g11237 EALKAVSERDAASAELARVRESLETLEAQRQGLENELDGLRGELATMGRAKDSFAADLDASRQAIASKEAELRQLLLETSTVIAERDATIGTLNASVSQALTDGESKSIEWEQRVSTLELSLAEESSKRTVVEESAQSVLGELAALRDRLTTAEASLEEKEKASRKLRQALIDRKKASFQAEELLASAQKEKDESSNVIVALREELGRALQKSQQLEAERTQHADGAQAALDQLRASIASNADSWASTERALREDLAAAQASLARVRQDAADAATHEHEHRQTMDELRRTVAEGAASLQATIESRDALSRGLSEREEQLATMQEELVRVKEALGAVEALATEAHSNLHAACADVDRLQQELSLATQRSRDLEARLLDADKGDELGRICRERDDAVAALEAARRRIEGGDERVRHYELRVAEGEAAVREREDVADALSAQLESVQGEVGRLMATLEAARDREESGVRSAEEFRQEIFTLRTQMAALEYDDARRQRDAGTLDATVDALQDELAAARNDLASAVLRITQLEEVNAGDQLLRQDLERAVEESAAAVDAANAEAVLLRERVEQLSAAAGYHAINGGTSVPETHETGGTAGQESSGEPQSTALVSTQPRADMYVGSAVVAADASGTSPDAQRGVITKGRDGQSTMKFGEVEFNLEYLQYVILHYMVGNDAEVKYLANVLGTMLRFTPEQWKLVKAAMEKKNSWWGYVSPSPLNYNQLKK* # ORIGINAL: g11233.t1 original gene structure, not modified by PASA NODE_951_length_15536_cov_42.342 AUGUSTUS gene 1514 2663 . - . ID=g11233;Name=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS mRNA 1514 2663 . - . ID=g11233.t1;Parent=g11233;Name=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 2520 2663 . - . ID=g11233.t1.exon1;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 2520 2663 . - 0 ID=cds.g11233.t1;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 2092 2264 . - . ID=g11233.t1.exon2;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 2092 2264 . - 0 ID=cds.g11233.t1;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 1788 1970 . - . ID=g11233.t1.exon3;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 1788 1970 . - 1 ID=cds.g11233.t1;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS exon 1514 1652 . - . ID=g11233.t1.exon4;Parent=g11233.t1 NODE_951_length_15536_cov_42.342 AUGUSTUS CDS 1514 1652 . - 1 ID=cds.g11233.t1;Parent=g11233.t1 #PROT g11233.t1 g11233 MGAHYRVGPQSQWTADSLFTAFVFANVYFPVTWGIVYCALKILVKSVAGVHIPDFPPLRLYCVLHARLSRSLGDLAPLYYPIAAGALLTAARAISGCPVPFSYISGRGMAPAYEEGDVVIVTGHLPIRLYDDVLFWRREIIGGVFESSDDELGLGRIVGTQAVGPEGHFVNGRKDGAGINGSECNSAEALIVMGPTGRVVVPPSAIVGKAVM* # PASA_UPDATE: g8873.t1, single gene model update, valid-1, status:[pasa:asmbl_2816,status:3], valid-1 NODE_1854_length_8892_cov_41.1681 . gene 7641 8413 . + . ID=g8873;Name=g8873.t1 NODE_1854_length_8892_cov_41.1681 . mRNA 7641 8413 . + . ID=g8873.t1;Parent=g8873;Name=g8873.t1 NODE_1854_length_8892_cov_41.1681 . five_prime_UTR 7641 7687 . + . ID=g8873.t1.utr5p1;Parent=g8873.t1 NODE_1854_length_8892_cov_41.1681 . exon 7641 7746 . + . ID=g8873.t1.exon1;Parent=g8873.t1 NODE_1854_length_8892_cov_41.1681 . CDS 7688 7746 . + 0 ID=cds.g8873.t1;Parent=g8873.t1 NODE_1854_length_8892_cov_41.1681 . exon 7994 8413 . + . ID=g8873.t1.exon2;Parent=g8873.t1 NODE_1854_length_8892_cov_41.1681 . CDS 7994 8396 . + 1 ID=cds.g8873.t1;Parent=g8873.t1 NODE_1854_length_8892_cov_41.1681 . three_prime_UTR 8397 8413 . + . ID=g8873.t1.utr3p1;Parent=g8873.t1 #PROT g8873.t1 g8873 MISMLSRVRQIGVSTQSIVSRRSYATPPPRTSPNEPIAFSKTPGYSATINDTFFAKPRGNTTAGRVVQSISLAFFLTVVYFAVIDRSGEPVIVPEIEAVLKERQAMRNVRLKELEEEWTGRLKRLFGMGASPQTSSTVSTTTSAPESTDSAKK* # PASA_UPDATE: g8872.t1, single gene model update, valid-1, status:[pasa:asmbl_2814,status:3], valid-1 NODE_1854_length_8892_cov_41.1681 . gene 5048 7486 . + . ID=g8872;Name=g8872.t1 NODE_1854_length_8892_cov_41.1681 . mRNA 5048 7486 . + . ID=g8872.t1;Parent=g8872;Name=g8872.t1 NODE_1854_length_8892_cov_41.1681 . five_prime_UTR 5048 5221 . + . ID=g8872.t1.utr5p1;Parent=g8872.t1 NODE_1854_length_8892_cov_41.1681 . exon 5048 7486 . + . ID=g8872.t1.exon1;Parent=g8872.t1 NODE_1854_length_8892_cov_41.1681 . CDS 5222 7426 . + 0 ID=cds.g8872.t1;Parent=g8872.t1 NODE_1854_length_8892_cov_41.1681 . three_prime_UTR 7427 7486 . + . ID=g8872.t1.utr3p1;Parent=g8872.t1 #PROT g8872.t1 g8872 MEEIRDFSAELATLLDTRSRISSTKIQNIGRLGVQHIRNYKLVVHAVERFLAKCPPECKLAGLYVIDGVVRRSQAKYGAKDVFTPRFSKNMATTIENVLRCPAADRDRVRKVVDLWAHNAVFPEDVIQSIETMGSGYLPAPRSPGYYKVNKAPAGPAEAGSTKSLVDDFDYGDEDVDATPQPQSVGGTPAQLQGQLMPVGVPVPQLPVQNSIAVSNPIDASAIQSQIQHLQALLALNGVPQPHPPPLSQQQQQQQQQQHHPQPPVGAYGNPYAADHPGFPYHPSQQYDHPSHISYGPPIHAQGQQHPGGPPAPHAGGPPYGAPGNAPAGPPHASQPPPHGGYPPAGGAPGQYGQQPQQAQPQLQQPGGVPYYDQGFQGHPPHPSAHAHANAHGQPPPPGFSPPQHNTQYGYPPQQQPPQQHGYEGPPGAPPHHAPYGQPPFQHGEGAMQQGGGGGRDGRDGRDGRDGRDGYYDERDSRYGNRDSGGGGGRYEDDRRDGGRGGGGGGSRDRGFGGGGKNTDEVKLPPNCVLVRSCTLWVANLPSHFTKEMVHDIVGQYGAVVDVFIKADMQCAFVTMADRASAESAKRARYDVDGNVLKVRWSRSFPFRTTKMDWSWFSGEGAAPIHMVDRTKVPDVREGMVVEEAWLVKDEYKKHTGNDDGGGRRYEDAPRDRGTGWSSSGNGGSAADYGLSNSGGGGRYNSGGGGAGGDASSGPGPERFRHDRTDSRRKPYDR* # PASA_UPDATE: g8871.t1, single gene model update, valid-1, status:[pasa:asmbl_2812,status:3], valid-1 NODE_1854_length_8892_cov_41.1681 . gene 22 4734 . - . ID=g8871;Name=g8871.t1 NODE_1854_length_8892_cov_41.1681 . mRNA 22 4734 . - . ID=g8871.t1;Parent=g8871;Name=g8871.t1 NODE_1854_length_8892_cov_41.1681 . five_prime_UTR 4443 4734 . - . ID=g8871.t1.utr5p1;Parent=g8871.t1 NODE_1854_length_8892_cov_41.1681 . exon 4153 4734 . - . ID=g8871.t1.exon1;Parent=g8871.t1 NODE_1854_length_8892_cov_41.1681 . CDS 4153 4442 . - 0 ID=cds.g8871.t1;Parent=g8871.t1 NODE_1854_length_8892_cov_41.1681 . exon 22 4024 . - . ID=g8871.t1.exon2;Parent=g8871.t1 NODE_1854_length_8892_cov_41.1681 . CDS 697 4024 . - 1 ID=cds.g8871.t1;Parent=g8871.t1 NODE_1854_length_8892_cov_41.1681 . three_prime_UTR 22 696 . - . ID=g8871.t1.utr3p1;Parent=g8871.t1 #PROT g8871.t1 g8871 MAEAVKVIVRCRPLNAREKGLNCNIVVDMDSKIAQVAIKNPEEPNELPKTFTFDSVYGIDSNNRMIYDDFGFPMVESVMAGYNGTVFAYGQTGCGKTFTMSGLHDPPEHKGIIPSAFEHIFEQIAVQEATQFLIRASYLEIYNEEIRDLLGDNPKARLELKQHPDTGVYVKGLSHITVKSVEEIEQAMTLGYSHRTTGATLMNQESSRSHSIFTITIEASEMRAEDTDGKPHIRSGKLNLVDLAGSERQEKTGATGQRLKEATKINLSLSALGNVISALVDSNAKHIPYRDSKLTRLLEDSLGGNTKTLMVACVSPADNNYLESLSTLRYANRAKNIKNKPKINEDPKDALLREYQEEIMRLKAMLEAQGMSLPPGMGAALGGGAAPASRATAAASSSQASAPVTQTVTQTVVQLVPDPAAQEELEHLKGDYEKRIAELKKKHEEEQMTNQMLQEQVELLKAEYTKQREEVQRRVEAPVAGGKQKGVQASKQQQQQPQQGHVAAPSTASTSSHAAASPSTRAAAGKKASGDNSAADVSDSGSAGPRASEGGNQGGARTAESGAAPAGPRRKGQVVDNDHHPRVFESESGSTGQRPAAWGPAETGGAAPGGSRASGKKGAADSNGASSPEPVHSSQRAAASGAVRGGESGGVIKTPGAPRAVKGKPPTGKPPGGAREAGGVSRDVDGAHAEGRSPRTSASEGRVGSGKRSAARMSQGDLALSSGGVGDDADEYYEDEPAYDDEDLQGGDADGTYDAGYDARGEQTGSPAVQQQSGQQHAQSQQGNQQQQQQHTKGALLQARRTSSGRGVRGANAVASASNGSVDGRRDSGAQQTQGGYDESDGALVNEMAIGPDGTLVSLGASASTAAAVGGDAGDVTTGGAEGALQSQVDLMEKLRLLQERLVKGGHKANDNTLKQKMEIKSQGAKRKIEELREALQTTVDDDGKLEVIYGSMQDELKDKNKRLKLLRDKNRAAKKEIEDLQREFESEREDLLDTIRRQDMTLKLNLAILERVVPCLRRDCNYYNIDRIRNEAVWDEESELWKLPVLTITRTELPTGPADGLSSGGGVRGSLAQLSNGPNGYPGDYEYDDRDAYRDHLNRNANDSIPDYFGPKRAREILAKTTTDIDRAQQSGRDRVPDPYAPSVRADAMALGGGGGGRPVRGLEPLRGPGAQRSSNTPTDDSKQMMPKMLPRNLAPLTKDAGYR* # ORIGINAL: g1316.t1 original gene structure, not modified by PASA NODE_4097_length_2188_cov_36.5745 AUGUSTUS gene 1445 2017 . + . ID=g1316;Name=g1316.t1 NODE_4097_length_2188_cov_36.5745 AUGUSTUS mRNA 1445 2017 . + . ID=g1316.t1;Parent=g1316;Name=g1316.t1 NODE_4097_length_2188_cov_36.5745 AUGUSTUS exon 1445 1550 . + . ID=g1316.t1.exon1;Parent=g1316.t1 NODE_4097_length_2188_cov_36.5745 AUGUSTUS CDS 1445 1550 . + 0 ID=cds.g1316.t1;Parent=g1316.t1 NODE_4097_length_2188_cov_36.5745 AUGUSTUS exon 1839 2017 . + . ID=g1316.t1.exon2;Parent=g1316.t1 NODE_4097_length_2188_cov_36.5745 AUGUSTUS CDS 1839 2017 . + 2 ID=cds.g1316.t1;Parent=g1316.t1 #PROT g1316.t1 g1316 MGCFSTPEEAKSNEIDKELKKREKEINNEHKLLLLGTGESGKSTIVKQMRLLHLDGYTEKERKEARNTIYGNVYTSMKVCACETSLLCCFCKCL* # ORIGINAL: g2795.t1 original gene structure, not modified by PASA NODE_6969_length_485_cov_61.9829_potentialcontaminant AUGUSTUS gene 13 485 . + . ID=g2795;Name=g2795.t1 NODE_6969_length_485_cov_61.9829_potentialcontaminant AUGUSTUS mRNA 13 485 . + . ID=g2795.t1;Parent=g2795;Name=g2795.t1 NODE_6969_length_485_cov_61.9829_potentialcontaminant AUGUSTUS exon 13 485 . + . ID=g2795.t1.exon1;Parent=g2795.t1 NODE_6969_length_485_cov_61.9829_potentialcontaminant AUGUSTUS CDS 13 485 . + 0 ID=cds.g2795.t1;Parent=g2795.t1 #PROT g2795.t1 g2795 MNSTTVALTYDVTALPGIWSVCEIQVDPAIKKPDVSIFQQPCMITTQAVGNVISPGSCMQTTLTCNHPVFGYVRPGTAYQLDLMATRSLPDGQTNRAYIVALLNFEHELEPVVVDCWREYTNGSDIHVSFTDSLKKRILNSVTLRVYEDVNNVPSVP # PASA_UPDATE: g8442.t1, single gene model update, valid-1, status:[pasa:asmbl_8790,status:12], valid-1 NODE_671_length_19267_cov_40.1651 . gene 1253 6289 . + . ID=g8442;Name=g8442.t1 NODE_671_length_19267_cov_40.1651 . mRNA 1253 6289 . + . ID=g8442.t1;Parent=g8442;Name=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 1253 1306 . + . ID=g8442.t1.exon1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 1253 1306 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 1539 1651 . + . ID=g8442.t1.exon2;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 1539 1651 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 2135 2267 . + . ID=g8442.t1.exon3;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 2135 2267 . + 1 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 2619 2675 . + . ID=g8442.t1.exon4;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 2619 2675 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 2947 3100 . + . ID=g8442.t1.exon5;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 2947 3100 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 3463 3587 . + . ID=g8442.t1.exon6;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 3463 3587 . + 2 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 3947 3999 . + . ID=g8442.t1.exon7;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 3947 3999 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 4202 4301 . + . ID=g8442.t1.exon8;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 4202 4301 . + 1 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 4491 4626 . + . ID=g8442.t1.exon9;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 4491 4626 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 4821 4932 . + . ID=g8442.t1.exon10;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 4821 4932 . + 2 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 5401 5476 . + . ID=g8442.t1.exon11;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 5401 5476 . + 1 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 5666 5713 . + . ID=g8442.t1.exon12;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 5666 5713 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . exon 6063 6289 . + . ID=g8442.t1.exon13;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . CDS 6063 6221 . + 0 ID=cds.g8442.t1;Parent=g8442.t1 NODE_671_length_19267_cov_40.1651 . three_prime_UTR 6222 6289 . + . ID=g8442.t1.utr3p1;Parent=g8442.t1 #PROT g8442.t1 g8442 MTVYSLAKAVGFVGKMSEVQAEKCLAILTECLKQSRDANAHPTLVMEIKGIGSVHRDALAKHEAYLREYAQQTTSEPAKQIVAGIIDFLAGRSLATVAEQATAAKVTAAEARTDAADAKAKADDVDARVKLIEVDFANIRKYVDENINELKDFIGEIVKKLPVPMDFTEESRFLKIQKVLKLHFKCARGSPGCIFSKTTFTTETRQINKWIKVAFCAIQTGKALWDKDVGAALEGMRGVYDAASIEYDSSFVQFITQPFLTSEEQDELIFQLRDARFFDSFVYDTRCGNWCCMVCANPDTQGASASTLQTAVQAQSASVSVSVSGKAPIASSSSLDIVEGVLFKKREVLPGWKKKNAQITPQGLKFTEFGGKAEGLVPFGNIVGVNKAQERAAKAPHAFNIATSAKTMLWRAETEELCDAWISTLNDKVKTHRVSNARP* # PASA_UPDATE: g8443.t1, single gene model update, valid-1, status:[pasa:asmbl_8792,status:12], valid-1 NODE_671_length_19267_cov_40.1651 . gene 6588 14211 . - . ID=g8443;Name=g8443.t1 NODE_671_length_19267_cov_40.1651 . mRNA 6588 14211 . - . ID=g8443.t1;Parent=g8443;Name=g8443.t1 NODE_671_length_19267_cov_40.1651 . exon 13743 14211 . - . ID=g8443.t1.exon1;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . CDS 13743 14211 . - 0 ID=cds.g8443.t1;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . exon 12373 13421 . - . ID=g8443.t1.exon2;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . CDS 12373 13421 . - 2 ID=cds.g8443.t1;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . exon 6588 12062 . - . ID=g8443.t1.exon3;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . CDS 6705 12062 . - 0 ID=cds.g8443.t1;Parent=g8443.t1 NODE_671_length_19267_cov_40.1651 . three_prime_UTR 6588 6704 . - . ID=g8443.t1.utr3p1;Parent=g8443.t1 #PROT g8443.t1 g8443 MPETPTQPRICRVFLRESTALLTLMCFYIATEVGRVAGGAVAVRPFYVPAECLQDAGLVVLNKAGGLTVACMGPTACSTTNATYDEASPESGLTNVDDWVDLSSVPTSLFGADKLVVPVDGEANTLYGITQNGLFISRDNGISYMSALLWNCDDAAAPVQCPLVDPSYSATSAGAPASNKTLQCSSDGASTLSIVDRTAGAFYMTWDTQEARTGIKYLLECDSLPTFDSGLRQISNMAVLASQPTFTYGQYATVAAIGLAPTSPPAGLRANYLREDYFVWWKTTVNDTGPLSGATVIDVDISSDNITTNVHVCAAVLQELRKAKIAVDPTVNVTADNFISASCDGSGDLLTIGQLTSGAVPFPLQKGTVGQMPSTTTQSTGFGAVGSIPSKTAKIRVSGASFSKGESTGGSVISNGVPTGAISSNNWFMYNDKWSIGHYFYIYINSGCVDERAALAPENLVSVNRVDLTGVFNKPDAATVIAAVANSIDGFSATVTPSTVTAGRKHSWYFDKTGSLTAPTTGPVSPNSTYTRIDISDPNGQTTALELAVVIRNALNSVPGSPFVATIPGGDFKSGAVSVEALGLTPPNLRGRWFITALDTSTAESVSAIGAVIPLPTRDDIVIRLCIESDGKADTETSAGGSCRKNTTTAGATIEVVFATGATVTQNALAIMTALRNASNYPPGVMPFLVEQDISGLLNDRVAVWQPLAGNIPVRTICEITVDHPTSTPNGVQITFASQDGTFLSTLCAEGSGGECPASSIKVTRDDAYIRVSSITAGADPTVVLDVGHGFVTNDLIVFIDTDDSGGGVSSKLAQRGFRVGIKRGNEVKLAPNSTLTTTSAGTTGRAYKAAAGSTRVSDATANTDANNGTFSKASHGLSADDVIYFTGEASSATNFANGKLCQVAPITSTIFRCGGGLATASETAIAYYKIAAASDTPPAVISISVGGNPTLTTSTVHRFKMGDIVTFPFPKNGAGTALAADAAVWQHRFFRVASVPSATTFTVSPSVTTTATATGKIYRSVVDATYTRSHTAHGLKRAMDADPTCSLHFETYIHDNANCNVLRVYQKKSGSVPSLRQHRMSDSTVANAPSGMKYVLFDVANNNRKIEFCVEHTIIGPGGQCEPSTDTNNAVIELHVRLRLSEMTTGSVSLMSGNHGITQDSLVAFLSVDSDAGSAVNQRAFKASSVTGATLALLPSVTLSAAATTGFVYVFTSIRYAAASASDSGDTTITAQADATPSASGVTANNDVIYMTGVQGVGASFSGGVVCVVVSFSLNGAAANSWNCKNGRVASGTNSNIEYYLISTAASKLNITKTSTGTTSPVISLGGSVGSAKIGDLVVVELDSAAAGAPSEQFRNKIFRILSILSPTTVILDPPLSSAPSVSSAGAMWVLAIKDTPTAAHRDQRLTIFSTAALYPGGALAFDVGTTSTGIIMLQQKAAGAILGRPTFTYTTDTAENTRSGGTLTFYLQDDSAVSVCFDKSTLCPATNGKQIRADISGASTAVSVAAILFQVLVDATIPGIGDITVATTDVKIYLLPGAIPARKPELIGTSRTSSLCFQWSVSTISSSTATVIGYTSGGTYSAPTSWSADSISGTVLYYKDSASAANIWGYSCANMQDGTATFLWTTAKSLQSSSTGVIDSGDTLNIGFTQDLAYSDPVVTITGDVAAATIIIPKTNLLPGLTFTGSGYIRDKVSASMISKSSIAQGQAFTFWSILGSPKKYAVRFFTNPDTTLRPPRALHEVPIDVTDSPDALTLNQRLIAGLDAIPGISASLGKQRVEITCDNGTVTPHGLRLHFFSSATNQLFAVWMDKGGAAPTLPDGALGVKVTLSNGDSANAVASKLTAAASGDTAFSAVFVVAVRPPSNVVLFTQRVGGAVIGQARVRIIADRGSFASFPAIGGHTMHLFSLSTEYRICIKQLADDCTIDDSAIRTTINCTAANCDSAAKMAPLVLAAVNSFGSTFSAVIVSPSVYVTVNAPGTSTPSFLDWSVGNWGLINMIDTGHSPRDPVELGGDSMKEGIRVGPSESVGAWRYQQALEGSNSVRIEQDFIAANANDAVTGGTTPTTALTTTTASGGGNSDRAVGDGIIGRDTIRAAYASDGRKVATIEGVLEGFAAALATKTVYCRLWGAAADPDTLTGYTRPCTLGGAVSEVLRSTQTAASPPIRMYPSTVSFSSSDSALVTWMEPEAYSGFSGATTEVQYMRCADGPGTCEGAITCPTDGNVCPTLNTTLGSSGLRLSGLGGSDGAYYVFRVRTKYAASDYGALSSPVYARYEPCPAIIGIGFYGDQ* # PASA_UPDATE: g8444.t1, single gene model update, valid-1, status:[pasa:asmbl_8791,status:12], valid-1 NODE_671_length_19267_cov_40.1651 . gene 16440 19022 . + . ID=g8444;Name=g8444.t1 NODE_671_length_19267_cov_40.1651 . mRNA 16440 19022 . + . ID=g8444.t1;Parent=g8444;Name=g8444.t1 NODE_671_length_19267_cov_40.1651 . five_prime_UTR 16440 16603 . + . ID=g8444.t1.utr5p1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . exon 16440 16709 . + . ID=g8444.t1.exon1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . CDS 16604 16709 . + 0 ID=cds.g8444.t1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . exon 16843 17592 . + . ID=g8444.t1.exon2;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . CDS 16843 17592 . + 2 ID=cds.g8444.t1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . exon 17886 18048 . + . ID=g8444.t1.exon3;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . CDS 17886 18048 . + 2 ID=cds.g8444.t1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . exon 18302 18593 . + . ID=g8444.t1.exon4;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . CDS 18302 18593 . + 1 ID=cds.g8444.t1;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . exon 18920 19022 . + . ID=g8444.t1.exon5;Parent=g8444.t1 NODE_671_length_19267_cov_40.1651 . CDS 18920 19022 . + 0 ID=cds.g8444.t1;Parent=g8444.t1;3_prime_partial=true #PROT g8444.t1 g8444 MAPPLLILSRLQNLRVSMGLGLAILVVSAAMNSIEGVDGATIDNATLSAWKGAFVEWKDAYVTWANDNGCPSGSFNASQWLNALDSIDRETVTWEGVVAAFKQAQASWHALHPGCKVICKSPDDPASSTASSSEDCLWDGEFPYGARVPVQLGSDECKTTWMAPPTSPGGEYGTCTCASPSDPKTNADKSVTCSWAYGAIPNGNPFPSGHADACATGLAAPDRFTPIASALYCSCPSVDDPGYTTNVCHWDIGYVPPNLRVTNKSYCFYSTSTAPDPHMGLLKCQPAGSAPPSDFYNQIITRIKSSWSTGYWAFPEGSGEYEAYQVISSYITKTASSDIRSLYATTGMTVAVAPQWTAVIASAESQSVMYSYLPAGKCDRVACFDNVIQILTEEFSDVAIVANWLFSMTTTIDQLAVTISSGATVAGAMVATQDSNSVTPPKPIGTYVLDLVGLVINAITYVAATPIAIAL # PASA_UPDATE: g11582.t1, single gene model update, valid-1, status:[pasa:asmbl_3817,status:12], valid-1 NODE_2228_length_7150_cov_42.4616 . gene 1816 3995 . + . ID=g11582;Name=g11582.t1 NODE_2228_length_7150_cov_42.4616 . mRNA 1816 3995 . + . ID=g11582.t1;Parent=g11582;Name=g11582.t1 NODE_2228_length_7150_cov_42.4616 . five_prime_UTR 1816 1855 . + . ID=g11582.t1.utr5p1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 1816 1880 . + . ID=g11582.t1.exon1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 1856 1880 . + 0 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 2025 2072 . + . ID=g11582.t1.exon2;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 2025 2072 . + 2 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 2268 2307 . + . ID=g11582.t1.exon3;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 2268 2307 . + 2 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 2471 2598 . + . ID=g11582.t1.exon4;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 2471 2598 . + 1 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 2910 2931 . + . ID=g11582.t1.exon5;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 2910 2931 . + 2 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 3165 3246 . + . ID=g11582.t1.exon6;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 3165 3246 . + 1 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 3446 3592 . + . ID=g11582.t1.exon7;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 3446 3592 . + 0 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . exon 3835 3995 . + . ID=g11582.t1.exon8;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . CDS 3835 3978 . + 0 ID=cds.g11582.t1;Parent=g11582.t1 NODE_2228_length_7150_cov_42.4616 . three_prime_UTR 3979 3995 . + . ID=g11582.t1.utr3p1;Parent=g11582.t1 #PROT g11582.t1 g11582 MVFYFTSNVVKPEITLYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMQPGWTLDTIPDALVQDCAQLTKANSIEGCKLSNVQIVYTLWSNLKKTGDMDVGQVSFHNDREVRRIKIDKSNDIVNRLNKTKREDHPDLFALREQRDREEREEKKRNMREQQRIEKAEAERRSAEKEQRSYSSLMNESKMKSNIEVKKTVTQYEDDFM* # ORIGINAL: g11583.t1 original gene structure, not modified by PASA NODE_2228_length_7150_cov_42.4616 AUGUSTUS gene 5010 5960 . + . ID=g11583;Name=g11583.t1 NODE_2228_length_7150_cov_42.4616 AUGUSTUS mRNA 5010 5960 . + . ID=g11583.t1;Parent=g11583;Name=g11583.t1 NODE_2228_length_7150_cov_42.4616 AUGUSTUS exon 5010 5229 . + . ID=g11583.t1.exon1;Parent=g11583.t1 NODE_2228_length_7150_cov_42.4616 AUGUSTUS CDS 5010 5229 . + 0 ID=cds.g11583.t1;Parent=g11583.t1 NODE_2228_length_7150_cov_42.4616 AUGUSTUS exon 5569 5960 . + . ID=g11583.t1.exon2;Parent=g11583.t1 NODE_2228_length_7150_cov_42.4616 AUGUSTUS CDS 5569 5960 . + 2 ID=cds.g11583.t1;Parent=g11583.t1 #PROT g11583.t1 g11583 MKGTGYDFQMRTHAERGANGGLSAARKRHIMQIGAAIFVCAVFLYLSYSSMWSGSSVAAGHQGHSHAAAAGAAAADNALDMDGPTGEEEDDLADAADAAANEGGAGDPDEKVPVGDDGELEDELPTEEEGESDTEPNDEVELDGDETLTEDTDSDTKPNDEVENVETVDEAAVAAVDGARDAQEGEDTEAESDAGDDPQDTKG* # PASA_UPDATE: g4175.t1, single gene model update, valid-1, status:[pasa:asmbl_2128,status:12], valid-1 NODE_1608_length_10212_cov_42.0531 . gene 231 1485 . - . ID=g4175;Name=g4175.t1 NODE_1608_length_10212_cov_42.0531 . mRNA 231 1485 . - . ID=g4175.t1;Parent=g4175;Name=g4175.t1 NODE_1608_length_10212_cov_42.0531 . five_prime_UTR 1406 1485 . - . ID=g4175.t1.utr5p1;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . exon 1388 1485 . - . ID=g4175.t1.exon1;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . CDS 1388 1405 . - 0 ID=cds.g4175.t1;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . exon 1203 1263 . - . ID=g4175.t1.exon2;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . CDS 1203 1263 . - 0 ID=cds.g4175.t1;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . exon 231 803 . - . ID=g4175.t1.exon3;Parent=g4175.t1 NODE_1608_length_10212_cov_42.0531 . CDS 231 803 . - 2 ID=cds.g4175.t1;Parent=g4175.t1;3_prime_partial=true #PROT g4175.t1 g4175 MSQPPTSRSGRSRVAVRLAMETMETRASTKRNREEFEGSQCVGKNTRLRVVAHLHHSLVGSVAVRTVAVTVEDSLTEKERIAAASETIARTYPLVPKGTVSWDDREQLVVDIGYLTASVRFCGGVSYSEVTATARVLHKCPWSLFRMMVLLEAAYARSAPFVCLPICSADADLAPPDARVGLQDSGDFELGAIVGVTAAAVLKHFTDDGYAECLVVG # PASA_UPDATE: g4176.t1, single gene model update, valid-1, status:[pasa:asmbl_2127,status:12], valid-1 NODE_1608_length_10212_cov_42.0531 . gene 2038 5964 . + . ID=g4176;Name=g4176.t1 NODE_1608_length_10212_cov_42.0531 . mRNA 2038 5964 . + . ID=g4176.t1;Parent=g4176;Name=g4176.t1 NODE_1608_length_10212_cov_42.0531 . exon 2038 2374 . + . ID=g4176.t1.exon1;Parent=g4176.t1 NODE_1608_length_10212_cov_42.0531 . CDS 2038 2374 . + 0 ID=cds.g4176.t1;Parent=g4176.t1 NODE_1608_length_10212_cov_42.0531 . exon 2667 5964 . + . ID=g4176.t1.exon2;Parent=g4176.t1 NODE_1608_length_10212_cov_42.0531 . CDS 2667 5659 . + 2 ID=cds.g4176.t1;Parent=g4176.t1 NODE_1608_length_10212_cov_42.0531 . three_prime_UTR 5660 5964 . + . ID=g4176.t1.utr3p1;Parent=g4176.t1 #PROT g4176.t1 g4176 MTFDNGAPLRYVVEVQGLRCAEWSTPDAHNVSPEGRGLADRRGRRVLMTVPGGMHDGGAVASLANAVGLLVPPSERRVKSVILFHGNSRLTEAWTPATYTHTVGIVALVSDSGARAVSARMELRVESALSGSGTCLNSPNAFERPILMLGRDTTLADLTRILDMNVCRLVGKAARYGRVTVGGRDICDDLSLSRAILCGPYRADCHVIVWLTKETSSLLAALDIEVVEVDGDPHGRSQLSSTRLVLRGTKISTLADPIANVYSDFQLVRVELDDAEKGLSDVFDVAPGRARSHLVLIFARAGTAVRRTLPPETRGVLELSGVAEHWVLPSAMDLDAMARKHWAVGNTSIPGHTLYGAKFDHKNKYTTRTVIRRVALLAKACEGGDRWAKSYVELLQKEEGILKGNCSRAAMCRIDDVLREGCGTLSPLEVSVDGTFAIVGGREGAVVHVVDWDGRMGLRSLFAQEGTTVQMLLTARSVEAVGERMRTPAIESAYTRWLKTTDAVALCNISKLTGGTKDVCVFEAMSWREVDTAPATDNVMLCFLRVREGLVLTTDAVTNRVIFRETEGKTADSFADIVISVPRATAHELFELKEDGVSILRARNRHGQDDGVLSWMFTVSHNRSDTAYLHLASAMGVGTRYTHVLVVQKSQFDAYRERWGETHAILVLPESLERYITENGKMLLKLSANAKRGGCGYARLVVQLVAHRLGLEAVHVWDDNIRACEQLRPMKAGDQTSGTLTACRFDVVLKHLEGILNVGGGVVTDTLNFEVRTEPQEADVQRTQRAAARACERLEDLCSVSESDRRPTSWETFSPGASEIGLIGFQAKGKFGGKSVKRPFSVSHSITKAVLINVRATVSRGVLYPIMTEREDFEFAHMCVEAGLRVVKCNRFFLRKNYALAASTSKSVCGQLECVGFHSDVPIPDTGTAVDEGLFGESQMAFLGWAAANAPMLLFYPPSATAQSELQMGCGSSLVDIYGELLLSAADCKPGVCVLWHASRMHREGKVTTLDAKEIVEWCGDRLILPNADMHTRVSVLFRTADCPVVDAPARTFSGVRLLNKLGVKERCHCGKRNNVHFSTLLSTLVVSPETVSSGFLLLQMTVSSRSVK* # ORIGINAL: g4177.t1 original gene structure, not modified by PASA NODE_1608_length_10212_cov_42.0531 AUGUSTUS gene 8251 9971 . - . ID=g4177;Name=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS mRNA 8251 9971 . - . ID=g4177.t1;Parent=g4177;Name=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS exon 9846 9971 . - . ID=g4177.t1.exon1;Parent=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS CDS 9846 9971 . - 0 ID=cds.g4177.t1;Parent=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS exon 9552 9636 . - . ID=g4177.t1.exon2;Parent=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS CDS 9552 9636 . - 0 ID=cds.g4177.t1;Parent=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS exon 8251 9374 . - . ID=g4177.t1.exon3;Parent=g4177.t1 NODE_1608_length_10212_cov_42.0531 AUGUSTUS CDS 8251 9374 . - 2 ID=cds.g4177.t1;Parent=g4177.t1 #PROT g4177.t1 g4177 MTGQKPKRTEREGAAASTKKTCTSDKTAPSSSVLRYFSIIPRDGATNTRNDSGPADPMRTLPTLEAPRQSKRAHDAANEDKENENSNAGMSGSCKRRRLDATVPRGTLCGAGAMDRPKAIGWSRDTCETVKHKCQSADRPSSTVCREWARSSKESHVKDVARKLVRRLHVDEVALIQGFEPSWFEVPEVSYNDRIAAIGNAVPPPVARAIFRAIGEVVEFKNKTTIDICAGAGGLALGTTALTGFEHLALVDFWDVSVKILANGKNDKPWAPAVVHCADVTTFDYGSFAGRVGVLSGGPPCQPFSSGSKRQLGREDERDIFRCVPDIVRDVRPEVFLFENVPGLKSERNAEYFDEILRRLRSPGDGLKYAVNHRVVNAVNHGVPQHRKRLFTIGLQNGSARDIDKIFARLERNAAKGSPRTVGDILLPDERSGPWLSWPFDSLV* # PASA_UPDATE: g3622.t1, single gene model update, valid-1, status:[pasa:asmbl_5683,status:12], valid-1 NODE_3183_length_4079_cov_41.2527 . gene 2150 3764 . + . ID=g3622;Name=g3622.t1 NODE_3183_length_4079_cov_41.2527 . mRNA 2150 3764 . + . ID=g3622.t1;Parent=g3622;Name=g3622.t1 NODE_3183_length_4079_cov_41.2527 . five_prime_UTR 2150 2185 . + . ID=g3622.t1.utr5p1;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . exon 2150 2235 . + . ID=g3622.t1.exon1;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . CDS 2186 2235 . + 0 ID=cds.g3622.t1;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . exon 2870 3154 . + . ID=g3622.t1.exon2;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . CDS 2870 3154 . + 1 ID=cds.g3622.t1;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . exon 3428 3764 . + . ID=g3622.t1.exon3;Parent=g3622.t1 NODE_3183_length_4079_cov_41.2527 . CDS 3428 3764 . + 1 ID=cds.g3622.t1;Parent=g3622.t1 #PROT g3622.t1 g3622 MSGAPPPYSQDAEAGEKGIPAHSPADPSQAPQAYPPPAYPPQQGYPDHQQGYPPQQGYPPQAQHGYPPQQGYPPQQGYPPQQGYPPQAQHGYPPQQGYPPQGYPPQGYPPQQYQQTVVQVTTSPAPQPMQTVYVQEKGFFENSKILIPKMILPLAVICCIINFIFPGGGGFAAARQRGAVYLWMARPFIRALLTPSLLSVCISSCALAESMGTTLMTHHLSRA* # ORIGINAL: g3621.t1 original gene structure, not modified by PASA NODE_3183_length_4079_cov_41.2527 AUGUSTUS gene 175 1432 . + . ID=g3621;Name=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS mRNA 175 1432 . + . ID=g3621.t1;Parent=g3621;Name=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 175 219 . + . ID=g3621.t1.exon1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 175 219 . + 0 ID=cds.g3621.t1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 362 391 . + . ID=g3621.t1.exon2;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 362 391 . + 0 ID=cds.g3621.t1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 504 570 . + . ID=g3621.t1.exon3;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 504 570 . + 0 ID=cds.g3621.t1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 758 892 . + . ID=g3621.t1.exon4;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 758 892 . + 2 ID=cds.g3621.t1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 1038 1184 . + . ID=g3621.t1.exon5;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 1038 1184 . + 2 ID=cds.g3621.t1;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS exon 1398 1432 . + . ID=g3621.t1.exon6;Parent=g3621.t1 NODE_3183_length_4079_cov_41.2527 AUGUSTUS CDS 1398 1432 . + 2 ID=cds.g3621.t1;Parent=g3621.t1 #PROT g3621.t1 g3621 MAAYNRGQRHFGENYVQELVDKVPQMPSDVQWHFIGHLQSNKAKDVAAIPNLAFVETVDSVKLATALNKTAAKANRTTSLNVLVQVNTSGEDSKSGTSTADALAIVRHVIDSCPLLKFSGLMTIGDPEWDRNNPPNKDFKASIGGVQRCNLP* # PASA_UPDATE: g3320.t1, single gene model update, valid-1, status:[pasa:asmbl_5762,status:12], valid-1 NODE_323_length_26964_cov_44.3326 . gene 12557 13292 . + . ID=g3320;Name=g3320.t1 NODE_323_length_26964_cov_44.3326 . mRNA 12557 13292 . + . ID=g3320.t1;Parent=g3320;Name=g3320.t1 NODE_323_length_26964_cov_44.3326 . five_prime_UTR 12557 12682 . + . ID=g3320.t1.utr5p1;Parent=g3320.t1 NODE_323_length_26964_cov_44.3326 . exon 12557 12818 . + . ID=g3320.t1.exon1;Parent=g3320.t1 NODE_323_length_26964_cov_44.3326 . CDS 12683 12818 . + 0 ID=cds.g3320.t1;Parent=g3320.t1 NODE_323_length_26964_cov_44.3326 . exon 13093 13292 . + . ID=g3320.t1.exon2;Parent=g3320.t1 NODE_323_length_26964_cov_44.3326 . CDS 13093 13217 . + 2 ID=cds.g3320.t1;Parent=g3320.t1 NODE_323_length_26964_cov_44.3326 . three_prime_UTR 13218 13292 . + . ID=g3320.t1.utr3p1;Parent=g3320.t1 #PROT g3320.t1 g3320 MASMEKSLKIGRALFVAARPFQTQFNHEVPRMPRALSPMQEIAEPGELGHGERQSHLETIVGFGNSWHRPDSSVSMRDEMWLASPI* # PASA_UPDATE: g3319.t1, single gene model update, valid-1, status:[pasa:asmbl_5761,status:3], valid-1 NODE_323_length_26964_cov_44.3326 . gene 9883 12375 . + . ID=g3319;Name=g3319.t1 NODE_323_length_26964_cov_44.3326 . mRNA 9883 12375 . + . ID=g3319.t1;Parent=g3319;Name=g3319.t1 NODE_323_length_26964_cov_44.3326 . five_prime_UTR 9883 9934 . + . ID=g3319.t1.utr5p1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . five_prime_UTR 10317 10324 . + . ID=g3319.t1.utr5p2;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 9883 9934 . + . ID=g3319.t1.exon1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 10317 10493 . + . ID=g3319.t1.exon2;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 10325 10493 . + 0 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 10820 10941 . + . ID=g3319.t1.exon3;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 10820 10941 . + 2 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 11225 11302 . + . ID=g3319.t1.exon4;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 11225 11302 . + 0 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 11463 11511 . + . ID=g3319.t1.exon5;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 11463 11511 . + 0 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 11734 11870 . + . ID=g3319.t1.exon6;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 11734 11870 . + 2 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . exon 12054 12375 . + . ID=g3319.t1.exon7;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . CDS 12054 12254 . + 0 ID=cds.g3319.t1;Parent=g3319.t1 NODE_323_length_26964_cov_44.3326 . three_prime_UTR 12255 12375 . + . ID=g3319.t1.utr3p1;Parent=g3319.t1 #PROT g3319.t1 g3319 MAPKTATKKPAGPHNPRNKALGNGISRLSRTAVYQKRALYKKKKTAAVAKPAVAASLTKTKEVKGAKNGGKREVVLVRQPRFYETDDVSKPLPNRKNVTPAKLRSSITPGTVLVLLAGRFRGRRVVFLKQLPSGLLLVNGPFKVNGVPLRRVNQSFVIATSTKVDISGVKVNEKLTDDYFRRPKQDKKKKSAGEFLEKTEEKKVVADSRKADQKEADKALLEIVKKQPLLAAYLGSRFSLKQGQFPHELKF* # PASA_UPDATE: g3317.t1, single gene model update, valid-1, status:[pasa:asmbl_5760,status:3], valid-1 NODE_323_length_26964_cov_44.3326 . gene 4078 6827 . - . ID=g3317;Name=g3317.t1 NODE_323_length_26964_cov_44.3326 . mRNA 4078 6827 . - . ID=g3317.t1;Parent=g3317;Name=g3317.t1 NODE_323_length_26964_cov_44.3326 . five_prime_UTR 6700 6827 . - . ID=g3317.t1.utr5p1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 6586 6827 . - . ID=g3317.t1.exon1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 6586 6699 . - 0 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 6353 6473 . - . ID=g3317.t1.exon2;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 6353 6473 . - 0 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 6104 6219 . - . ID=g3317.t1.exon3;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 6104 6219 . - 2 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 5728 5884 . - . ID=g3317.t1.exon4;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 5728 5884 . - 0 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 5340 5506 . - . ID=g3317.t1.exon5;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 5340 5506 . - 2 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . exon 4078 5047 . - . ID=g3317.t1.exon6;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . CDS 4136 5047 . - 0 ID=cds.g3317.t1;Parent=g3317.t1 NODE_323_length_26964_cov_44.3326 . three_prime_UTR 4078 4135 . - . ID=g3317.t1.utr3p1;Parent=g3317.t1 #PROT g3317.t1 g3317 MASIESMLRLSVGKDEAVRSTLGHKHAEEALHRASHGETFLRSKRVLQLARSRRPLTDIAADKMIDEALAKMQEQNLTALPVYDLHGRKYCGVITAFDIMAHIAEDYFDENGKVVGKDIIHGLKKTPISELIGEADGRDGSSVGGKNNASLFVSSPSASLYDVLERMCHGVTHFLVRTTETSEEGGYADLVAESKDDDHVMVSAVDVLRFLVENSAQFPGSFSKLIGDLGMQFPDTTHNRSFVSVDPSTAAVVALRMMHVTGADAVAVIEGGTDSTTTAAYADQLRSALTVASSTPMDTLGGHPSSRNESENASQLHETAAPFLGTLRCAEQMSRDEQAMRVAERREKNDTATAVGRREEHGDWLEQQEERLDSEIERTREAHRHEQPTSNADVAERTALGNVAATGECAVSQARNSTKPAQHPQHRFIGTLTASDVRGLRTTMLSQLEQPVIDYLARRHHDHVPQPIAVHPDATLLSIATKALVSRVHRLWVVDESGQPTSVVRIVDILSSVFKDIGGHHLVPAVEE* # ORIGINAL: g3322.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 16258 17853 . + . ID=g3322;Name=g3322.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 16258 17853 . + . ID=g3322.t1;Parent=g3322;Name=g3322.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 16258 17853 . + . ID=g3322.t1.exon1;Parent=g3322.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 16258 17853 . + 0 ID=cds.g3322.t1;Parent=g3322.t1 #PROT g3322.t1 g3322 MSADRPQCGMRISFALLPIEVVVSHIAPFLCNRDRASLAGVNASLRSALMFLRWYTLRRAYAEEFSKSIAIRKAVLVCIPRERLVLQLSGFVETLTASSLDGPNVYSLDLSDGYSITDVSALGGVPLLNLDRCFGVTDVSALGTVHSLILSNCHRITNVSVLGGVYSLNLSESLGVMDVSALGRVHSLDLSGCKGVTDVSVLGGVYSLNLSESLGVMDVSALGRVHSLDLSGCKGVTDVSVLGGVYSLNLSESLGVMDVSALGRVHSLDLSGCKGVTDVSMLGGVYSLNLSNCQQVVHVTMLGSVHSLDLSKCPGVTNVSALGGVHSLNLSSCEGVTDVSALGGVHTLNLSYSRGVADVSALGGVYSLKLNYCFKVTDVSALGGVYSLKLNYCFKVTDVSALGGVYSLKLNYCFKVTDVSALGSLHLLDLTCCYRILDVSALGGVHTLNLERCYCLTDVSALGGVHHSLSISHCEGVTGVSALGGVHALSISHCEGVTDVSALGGVHSLILVKCDGVVDISMLANVHSLTL* # ORIGINAL: g3323.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 19321 21669 . - . ID=g3323;Name=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 19321 21669 . - . ID=g3323.t1;Parent=g3323;Name=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 21588 21669 . - . ID=g3323.t1.exon1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 21588 21669 . - 0 ID=cds.g3323.t1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 21313 21374 . - . ID=g3323.t1.exon2;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 21313 21374 . - 2 ID=cds.g3323.t1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 20733 21020 . - . ID=g3323.t1.exon3;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 20733 21020 . - 0 ID=cds.g3323.t1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 20282 20391 . - . ID=g3323.t1.exon4;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 20282 20391 . - 0 ID=cds.g3323.t1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 19798 19981 . - . ID=g3323.t1.exon5;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 19798 19981 . - 1 ID=cds.g3323.t1;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 19321 19539 . - . ID=g3323.t1.exon6;Parent=g3323.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 19321 19539 . - 0 ID=cds.g3323.t1;Parent=g3323.t1 #PROT g3323.t1 g3323 MADDQRDSDPTEDAVTREAPAVYDLTLGLLSRIPVEVRDKVGACVVGAVTFPVALGAFQLCILRTLRVWAGSPISRLLGLAGVCAAGAASGHAMVVFSNLQGDVYAGDRYAIRYDFDHGQYEEALRGVMRVAGASWDAAGPGVNESLFYALLSIAPFKALGGRFASVAPSHLWHPGAHARRSLGAVSSAPAVRTIKEQLNVFGRKFGCHSCGRKGERTFIADHQPPSKIAGNRMQEFYPQCEPCSNRQGWSLSGSNIRPAFATHVTALRLYHLWFPLPLVWPYLREPWNGAVDASSVFVTKEWDVIAEKVRGHR* # ORIGINAL: g3316.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 1869 3968 . + . ID=g3316;Name=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 1869 3968 . + . ID=g3316.t1;Parent=g3316;Name=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 1869 2144 . + . ID=g3316.t1.exon1;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 1869 2144 . + 0 ID=cds.g3316.t1;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 2293 2414 . + . ID=g3316.t1.exon2;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 2293 2414 . + 0 ID=cds.g3316.t1;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 2598 2756 . + . ID=g3316.t1.exon3;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 2598 2756 . + 1 ID=cds.g3316.t1;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 2987 3968 . + . ID=g3316.t1.exon4;Parent=g3316.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 2987 3968 . + 1 ID=cds.g3316.t1;Parent=g3316.t1 #PROT g3316.t1 g3316 MHQPPHDAIAIHSAVSQAAIMHNNDAAVDKDASQSGNTQSTRASAIDCNWNTRLPIEVLVHIFGYIARDSVGPIPYIPRLSRVCRAWAVAAQDASLWVKVDLSRIRVTNAVLCAYARNRVWRMLEDLTLNYQKKVNDATIIAIATHCPRLKRISIAYCESLSKASIEGLSKHAASLERIDLTGISTDACSNATLTTSLYRTHASKLRGITLDYAPNVAKTHVASILEHLPALTHLSLAGVSVGKLSVVQLRHSCPLLEYINLAFASVSVSAPHIPASTAPLYPRTLAASASGPSHAPDERSANVVGNGVASHESNGVRERDRDGFARLKWLSVACDDRKSVSIDDDALFALAGKSPNLTYLDIRGARDITCRSLCRFAATGIETLFAGRSSFPGSRLPSAHVSGVSIAANAWGSSLRGLDVSYWLCNERQCDEDIAALSEDCAKLEWLNLAGTGVDVEGLRKLLRTGRSASSLRSLCVAACRRLPRTARLLASEAAEGGIAWTDAAELAKIL* # PASA_UPDATE: g3324.t1, single gene model update, valid-1, status:[pasa:asmbl_5759,status:12], valid-1 NODE_323_length_26964_cov_44.3326 . gene 23643 24666 . - . ID=g3324;Name=g3324.t1 NODE_323_length_26964_cov_44.3326 . mRNA 23643 24666 . - . ID=g3324.t1;Parent=g3324;Name=g3324.t1 NODE_323_length_26964_cov_44.3326 . exon 24466 24666 . - . ID=g3324.t1.exon1;Parent=g3324.t1 NODE_323_length_26964_cov_44.3326 . CDS 24466 24666 . - 0 ID=cds.g3324.t1;Parent=g3324.t1 NODE_323_length_26964_cov_44.3326 . exon 23643 24245 . - . ID=g3324.t1.exon2;Parent=g3324.t1 NODE_323_length_26964_cov_44.3326 . CDS 23895 24245 . - 0 ID=cds.g3324.t1;Parent=g3324.t1 NODE_323_length_26964_cov_44.3326 . three_prime_UTR 23643 23894 . - . ID=g3324.t1.utr3p1;Parent=g3324.t1 #PROT g3324.t1 g3324 MYARTGDVVWAKFKRRRQIWWPARLDDPFAAGSDGYPQTGAPGAILVRYIGRHTRAWLLDEEIQNFKDNLAVHARNGLHADGFSAALNEACFALGISRPAVERGDRDEPGVIVGRQRIDNESDEFEYLVQNPSSLEYFWTPRCDLPEGMIEHYESDLPPELRTMEGILARDVVSRSPHTNRRS* # ORIGINAL: g3318.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 8621 9478 . - . ID=g3318;Name=g3318.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 8621 9478 . - . ID=g3318.t1;Parent=g3318;Name=g3318.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 9394 9478 . - . ID=g3318.t1.exon1;Parent=g3318.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 9394 9478 . - 0 ID=cds.g3318.t1;Parent=g3318.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 8621 9309 . - . ID=g3318.t1.exon2;Parent=g3318.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 8621 9309 . - 2 ID=cds.g3318.t1;Parent=g3318.t1 #PROT g3318.t1 g3318 MASSEAQEKARRGASKSDERRDSVDDYLERTGLAPLLREGLSAVLQSRPDDPVQFLYDYYFDLMRGGGAQSKAIRLLRRTRPNSSNFGDIIYATYNILSTKKSSTVTQTGATGQPSGPARALAGEEYLKFMRVLLADVPSDLSELLMSKVIVAKDAEIVEFSVFRSGVTFACVVADMFADINDLVKEIGPDESGRIGGDNAVEAVPFFIERHAASIKIHRPPLQMLLGGRTGDIPPLLSPTDYFHLLCTKLLAGLSE* # ORIGINAL: g3315.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 599 1264 . - . ID=g3315;Name=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 599 1264 . - . ID=g3315.t1;Parent=g3315;Name=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 1162 1264 . - . ID=g3315.t1.exon1;Parent=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 1162 1264 . - 0 ID=cds.g3315.t1;Parent=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 869 1019 . - . ID=g3315.t1.exon2;Parent=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 869 1019 . - 2 ID=cds.g3315.t1;Parent=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 599 752 . - . ID=g3315.t1.exon3;Parent=g3315.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 599 752 . - 1 ID=cds.g3315.t1;Parent=g3315.t1 #PROT g3315.t1 g3315 MAALARGALCVVLIVIVLHPSSSNSAGVSPGIGNYCSGLGIGRTWCLYDKECTGSVLPAEPTASVFVHATLGAESGAGTMNAPISNISIGIRRAKERGLRTVVIAAGSYYENEAITLPNGVSLYGGFRVGSNGRW* # ORIGINAL: g3321.t1 original gene structure, not modified by PASA NODE_323_length_26964_cov_44.3326 AUGUSTUS gene 13606 15395 . + . ID=g3321;Name=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS mRNA 13606 15395 . + . ID=g3321.t1;Parent=g3321;Name=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 13606 13848 . + . ID=g3321.t1.exon1;Parent=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 13606 13848 . + 0 ID=cds.g3321.t1;Parent=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 14087 14713 . + . ID=g3321.t1.exon2;Parent=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 14087 14713 . + 0 ID=cds.g3321.t1;Parent=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS exon 14973 15395 . + . ID=g3321.t1.exon3;Parent=g3321.t1 NODE_323_length_26964_cov_44.3326 AUGUSTUS CDS 14973 15395 . + 0 ID=cds.g3321.t1;Parent=g3321.t1 #PROT g3321.t1 g3321 MALCLKRKRRVAIVVVIAIALAIITWQTSPATRRNGRPSNQPALNAVKKVMAPKASSVNVIRAVPTTAALPTNSSSPESIQPFLLDDSVAIGLHKLSDHVAEVRADADRIHIEIGPRYIRTLVIADQNVHLVKTGTIPVFPMYIFPTIRDESSRDIGSSLGIYKPVTTRRMALIFETIAKQPNARHRQFLDVGAGVGYFSLLARAHGINSIAIEAYAENAAILKENVYLRSDAEGNAIERDAAEYATTNKPRAFIRPIVAVLDKDAGRPVVVAGSSMTKHDVEFLKEGEEPTDKSHRARPQSAMETVTLDSLLPGVHDIIAAKINANGNEMRIIQGARRLFNFYSNPLDRTPCFVFIRFDPILLTRAGSNPKEFLEILTMSGYAVYTDDMDARTSRSLTPQSVITRPTDLFLIMRRSHCASVVKWLPKFV* # PASA_UPDATE: g3834.t1, single gene model update, valid-1, status:[pasa:asmbl_6916,status:12], valid-1 NODE_4064_length_2254_cov_30.1175 . gene 247 2168 . - . ID=g3834;Name=g3834.t1 NODE_4064_length_2254_cov_30.1175 . mRNA 247 2168 . - . ID=g3834.t1;Parent=g3834;Name=g3834.t1 NODE_4064_length_2254_cov_30.1175 . five_prime_UTR 2059 2168 . - . ID=g3834.t1.utr5p1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . five_prime_UTR 1660 1797 . - . ID=g3834.t1.utr5p2;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 2059 2168 . - . ID=g3834.t1.exon1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 1655 1797 . - . ID=g3834.t1.exon2;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . CDS 1655 1659 . - 0 ID=cds.g3834.t1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 1216 1407 . - . ID=g3834.t1.exon3;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . CDS 1216 1407 . - 1 ID=cds.g3834.t1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 796 907 . - . ID=g3834.t1.exon4;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . CDS 796 907 . - 1 ID=cds.g3834.t1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 457 594 . - . ID=g3834.t1.exon5;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . CDS 457 594 . - 0 ID=cds.g3834.t1;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . exon 247 329 . - . ID=g3834.t1.exon6;Parent=g3834.t1 NODE_4064_length_2254_cov_30.1175 . CDS 247 329 . - 0 ID=cds.g3834.t1;Parent=g3834.t1;3_prime_partial=true #PROT g3834.t1 g3834 MRYLNYFGAVVSTGTQVHRPVLALRRIQLNCVPAVDLTKSGCRPYIEVYQERSLVLSTYQDGDALRSYYVKDGGGIGINLNNVTVSGDVTVVGYHSSSSVLGKGKPTRLFRFQFHTGFEEGNSGPGKFRLSRNDLDEAAQDKLLPDQFMIQLEWEATGGDAGPYNGEWKEIPSEAS # ORIGINAL: g11516.t1 original gene structure, not modified by PASA NODE_317_length_27116_cov_40.918 AUGUSTUS gene 14424 19050 . + . ID=g11516;Name=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS mRNA 14424 19050 . + . ID=g11516.t1;Parent=g11516;Name=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 14424 14555 . + . ID=g11516.t1.exon1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 14424 14555 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 14880 15008 . + . ID=g11516.t1.exon2;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 14880 15008 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 15601 16032 . + . ID=g11516.t1.exon3;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 15601 16032 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 16199 16271 . + . ID=g11516.t1.exon4;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 16199 16271 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 16587 16800 . + . ID=g11516.t1.exon5;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 16587 16800 . + 2 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 17030 17141 . + . ID=g11516.t1.exon6;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 17030 17141 . + 1 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 17433 17645 . + . ID=g11516.t1.exon7;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 17433 17645 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 17823 17917 . + . ID=g11516.t1.exon8;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 17823 17917 . + 0 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 18256 18545 . + . ID=g11516.t1.exon9;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 18256 18545 . + 1 ID=cds.g11516.t1;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 18869 19050 . + . ID=g11516.t1.exon10;Parent=g11516.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 18869 19050 . + 2 ID=cds.g11516.t1;Parent=g11516.t1 #PROT g11516.t1 g11516 MLTATLALNPDFRFVLGMALLHGFWYDLASQTFREAIELEPDFAQMAYWGDALTCNRGVHMIEELERGREIVAQMVRRKLQPGTPKEAAYIDAVKALFANGKDKAARDFAFSRHMEAIARDHPDDPEAQSLYALSLLNKAQLSAHGYMLRGRALLDRALAVTMAVLAKHPMHPGANHYAVHALDHPLGAAAAVQMASNLRRIAPANAHMLHMASHIALRLGDWAAATANNEAATYAGLLYGMATNQSTVNSIEFHSMQFLHYAYIQQGRSHAAAEVLRMARLGTEELEARNDSVTEIDLVLSKVRYNIMAAVQMYDGHRLYPNMTHRAIEAPHVIRCATCNDVHGPTNTFLWSTLGNVAAYYLTGLAGLNWGHWPLVEDMIARIVALADILREPFPSTSTYLHSGALQLRGFLAAARPLPQSSSSRVDGDPSGIPEAIRLLKKAVELEVAAGPNPYGPSLFQPAHERLANLYLDAGMAVEALATLHAPAALEIRDANRAAWQLLELRAAAAVGDRARARMASIALEQMWACAEEDFPAQSPLATIANLVRMYGSQADRHAASMGSEKVLRHYKIATGVLAVFCSLLLVGVVAVVALFTHRTINTQPSRDYGQPARYSPLLNKF* # ORIGINAL: g11515.t1 original gene structure, not modified by PASA NODE_317_length_27116_cov_40.918 AUGUSTUS gene 3904 12972 . + . ID=g11515;Name=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS mRNA 3904 12972 . + . ID=g11515.t1;Parent=g11515;Name=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 3904 4695 . + . ID=g11515.t1.exon1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 3904 4695 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 5107 5275 . + . ID=g11515.t1.exon2;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 5107 5275 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 5576 5724 . + . ID=g11515.t1.exon3;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 5576 5724 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 5979 6075 . + . ID=g11515.t1.exon4;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 5979 6075 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 6248 6643 . + . ID=g11515.t1.exon5;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 6248 6643 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 6993 7235 . + . ID=g11515.t1.exon6;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 6993 7235 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 7434 7538 . + . ID=g11515.t1.exon7;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 7434 7538 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 7692 7771 . + . ID=g11515.t1.exon8;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 7692 7771 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 7990 8307 . + . ID=g11515.t1.exon9;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 7990 8307 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 8707 9329 . + . ID=g11515.t1.exon10;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 8707 9329 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 9546 9887 . + . ID=g11515.t1.exon11;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 9546 9887 . + 1 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 10225 10273 . + . ID=g11515.t1.exon12;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 10225 10273 . + 1 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 11140 11219 . + . ID=g11515.t1.exon13;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 11140 11219 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 11388 11438 . + . ID=g11515.t1.exon14;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 11388 11438 . + 1 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 11671 11719 . + . ID=g11515.t1.exon15;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 11671 11719 . + 1 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 11933 12037 . + . ID=g11515.t1.exon16;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 11933 12037 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 12211 12349 . + . ID=g11515.t1.exon17;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 12211 12349 . + 0 ID=cds.g11515.t1;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 12728 12972 . + . ID=g11515.t1.exon18;Parent=g11515.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 12728 12972 . + 2 ID=cds.g11515.t1;Parent=g11515.t1 #PROT g11515.t1 g11515 MKPPPHCDRWCGHSLSYLCAFAFIFFSAVTPTIAQTTELFVDAAYSGGSHDGSLAQPFTTLEDAFAAFGSIPSDSIIVTIRTGSYAMTNAGGITIDATSFATRSLTVRGASGTADDVFVACLTGVVSASSTTGFSLTGNVTSQVIFSSFKIGNCTRGALRVYDQVVMTIDKMVFTNCSTEPAFQAFNSARLTITNCRFERNVARTYSNLQSGIYNSAVGFDGSSVAVVRNSTFINNWCNFGAVVLTGNSDVTFYDSTWLSNVAVSGGGLYSELNGKVTCVRCRLENNTAETIGGGAYHSGNLVATYNESSFIGNRATTFAGALEVFNSAIIVMNNCLVKWNAALGSNGGGLYVTSTGRGIFNNVTVVENTAASFGGGLYAFSSANVTLTGSTFLRNTAATNGGGMYASSSARVSVDSCVFDSNAASNNGAGAYVFSTARVSISNSIYTGHTGTAAALIFASSNVVLNLQNVTAIASPGVNMGGLAVAVSAAVTATNISFSGFKTSVQGSAMGFLDNSVGRLTLISVTNTVAGAGAALLARGTSNVVISGFTVSNVRAVSSAGAIFIGDAANVTIAGLSVVRASAPFGGAVVLLGDSQTVLTGATFDNCSADTDSGGAIYVSTPVTGSSTFNTRLTIRNSAFRKNVAQLAGGGLFISSSYNVTVVLDTIEFSENSASKGGAVFIAQANFTARGNFRAVNYTLNRASIGGAIFTGDSASVPPCTGCLFVNNTALLYGADTSSNPSQLLWSPNITYFGSFRSGEFLNTTTVALVDIYGQRIRFARKSRSLPAVVRLYIEPIPANSSSVGDFIGETQKVVAEDFVNFGNIRVLGKPGQYRLIMEATQCPQSSAGADASSGLSVILSRNIDILPCGAREYSAAVPGHDGQTTCEPIVCSQGCVNGVCNATDLCICNPGWAGTACSVSTDSSASVNLGVIIGPVVGGSALLLLIFCARLFYWRRRIERKHKNIVDPAEVEMLDSIAAGSFGEVFKARFRGTIVAVKVIKGMGNSMVQSGYFRPGTSTSAAGTLVNGIDSVTAFHTVDGKQSDDPASASINRSVVVPKSEGKPGIVRKLSGLISSMSVRGRRMRLSEKASIDEFKNEADIMCSLRHPNCVLFMGLMEKYMSNGSVMDLFQSRKDIEWQQRLKMARQTVSGLNFLHQSGVVHRDLKSPNLLLDDNFVVKVSDFGLSKLQAKKVDATSDSNTVGTLLWMAPEVVRGETYLPASDVFSFAIIMWEFLTMDQPYYEARKSLQPTIIAWMAATKDYRPIVPLECPIPYARLMRACWHHDPGARPSFAEVAAKLEEYAANMDGEGSSHATGDNHAAELRLIAAMEMSQRRFSMPSS* # ORIGINAL: g11517.t1 original gene structure, not modified by PASA NODE_317_length_27116_cov_40.918 AUGUSTUS gene 19370 25674 . - . ID=g11517;Name=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS mRNA 19370 25674 . - . ID=g11517.t1;Parent=g11517;Name=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 25528 25674 . - . ID=g11517.t1.exon1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 25528 25674 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 25215 25244 . - . ID=g11517.t1.exon2;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 25215 25244 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 24876 25067 . - . ID=g11517.t1.exon3;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 24876 25067 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 24591 24630 . - . ID=g11517.t1.exon4;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 24591 24630 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 24315 24422 . - . ID=g11517.t1.exon5;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 24315 24422 . - 2 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 23773 23936 . - . ID=g11517.t1.exon6;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 23773 23936 . - 2 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 23494 23582 . - . ID=g11517.t1.exon7;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 23494 23582 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 22745 23170 . - . ID=g11517.t1.exon8;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 22745 23170 . - 1 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 22394 22553 . - . ID=g11517.t1.exon9;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 22394 22553 . - 1 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 21836 22100 . - . ID=g11517.t1.exon10;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 21836 22100 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 21386 21600 . - . ID=g11517.t1.exon11;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 21386 21600 . - 2 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 20131 21219 . - . ID=g11517.t1.exon12;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 20131 21219 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 19370 19909 . - . ID=g11517.t1.exon13;Parent=g11517.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 19370 19909 . - 0 ID=cds.g11517.t1;Parent=g11517.t1 #PROT g11517.t1 g11517 MRLGRLMAVGLMFITLSLMLYALLEQQESTFGGNELLRGSSKLGDLDDREGPLGRSRAQEGDAPAPRVVPADVEPDERIDMLEAKNGGEGEDGAENDGGDAQDGVLDVMPPIGHPIPAADVDEKLGPVRTVLNQNIGKCSFSKRRRTDEDIQMKQMFDQLPFDNPDGGAWKQGWPITYSQQRDFPDTLHIHVIPHSHCDPGWIRTYRDYFDAQTKSILTTMMEAMKSDERRKFIFAEISYLKLFWEEAPHMRDTIRRLLASGQFEIATGGWVMNDEANTNVYAMIDQLTEGHSWLEDNLPGVKPRNGWAIDPFGHTPTMAYVLNRAGLKSMLIQRTHYQVKKELAKNRNLEFRWRQNWATDTSTDFFCHMMPFYSYDIPHTCGPEPAICCQFDFHRLPGSPVFCPWHIAPVRITPGNVADKAEVLLDQYRKKATLYRTNHLLIPLGDDFRYMSSGEAENQYTNYQQLFDYMNGNPAMRVKAQFSTLEDYFSAIRDDGGSRKVKFPVLAGDFFTYADRDDHYWSGYYTSRAFYKGMDRVLEAALRAANIAYAFGRAIASRDSSAYAESRFNALKTARENLGLFQHHDGITGTAKDHVVMDYGRKLHDSLNGVKSLTRDMVQLFLSKTTADVYSNTAVFNIAETRSSHTDMPRRAILAVAGKPQGAYAVFYNPLASQRVSAESVYTDAPSVKVIDVATGQPLEYQSTLTWDDATTVTAGRYEITFVVTVPPLGASTIQIIELAQPADDAPFAKTTLYAGGPSRTIGSHHSIFEGDANSGDISITNGRISAYFGKDGMLRRHKDTATGISTEIIEDFLTYGSYKSGAYLFMPNGGPMSVHRNGRVRVTSGPLMSEVYVDMDGTKRWARLYTSPGPDGAVLELRHHVDVRGMDNKEFVVRYATNIDNGGVAYTDLNNFQMQRRERLDKLPLQANYYPMPAATFIQDGRTRLTLHSSQSLGVGIPRNGWFEVMLDRRLMQDDERGLGQGVTDNLLNEVVFHMTVEHASGSLDNEPVIAHPSMLSIAVAESLVHPLLELHATDAYSTPAFSPTFAPLREPFPCDVHLHDLKVLRHSSPKAALYVHTKAFDCAFPDVPRVCNAPSDSATLKLNLMLNGFAVDKATKASLTMMFDEGDAHADRIDISEPMEIVSYRVELNKA* # ORIGINAL: g11514.t1 original gene structure, not modified by PASA NODE_317_length_27116_cov_40.918 AUGUSTUS gene 799 2790 . - . ID=g11514;Name=g11514.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS mRNA 799 2790 . - . ID=g11514.t1;Parent=g11514;Name=g11514.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS exon 799 2790 . - . ID=g11514.t1.exon1;Parent=g11514.t1 NODE_317_length_27116_cov_40.918 AUGUSTUS CDS 799 2790 . - 0 ID=cds.g11514.t1;Parent=g11514.t1 #PROT g11514.t1 g11514 MAAVSHHRQMPSYHQQFDMAATAGYPPRGQYVDADMDGGAPQSRLMLVQQQFQQKMLVEKERRLNEAFDRQMHAQQQFQQRGGYGQAPSANRMSMPVIGAPPGAGKGGIPVAVRPPQGAGTLRSFFSERRTLQKDGDKNLPPIEHHYRRVQNQQQHQQQQYQQQHQQQQYQQQQQQHAGYNDYAQPSQIPQRQHSQHNMQYQQQQQQQQQQQQYYEAQQQRVQSLPVKPRFDPPTKARNVIPSIAAPSPPVGPNPNYGQRNLRYSNIAPPQDDEAPPAEVESRNLAHIKKIRERRINSQPKMEVTNNYEDEEVDDGAAERAREEAARSKRVRERRVKKAEVVNQDEEEEAVDDGAAREEAARTKRVRERRVKSQPKTDDVDADDGAAERAHLDELARKEQELKAALEREAEELARIKEQKRKQAAAAKKRDDEDRRRREKEQREEEERERREREEEEERERAAREQQAARKKVVAKKPAKKVTPPPESEDEEDEAPLPHAEYAIPDDAVAEGDTQMAACSVCARKFAVDRLAKHQNVCAKASKKKRKVFDMTKMRRMGTDLEEFKGAGRDADKREKEVERRKKKAAWRQQHENFIATVRAAKEMSEHVANGGKLADLPPPPPSENPDYVQCPHCSRKFNQGAADRHIPKCKDIKAKPNPVKKR* # ORIGINAL: g10275.t1 original gene structure, not modified by PASA NODE_1073_length_14213_cov_54.7059 AUGUSTUS gene 8211 9922 . - . ID=g10275;Name=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS mRNA 8211 9922 . - . ID=g10275.t1;Parent=g10275;Name=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 9548 9922 . - . ID=g10275.t1.exon1;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 9548 9922 . - 0 ID=cds.g10275.t1;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 9197 9433 . - . ID=g10275.t1.exon2;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 9197 9433 . - 0 ID=cds.g10275.t1;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 8890 9078 . - . ID=g10275.t1.exon3;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 8890 9078 . - 0 ID=cds.g10275.t1;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 8211 8342 . - . ID=g10275.t1.exon4;Parent=g10275.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 8211 8342 . - 0 ID=cds.g10275.t1;Parent=g10275.t1 #PROT g10275.t1 g10275 MVGGLHWAAREAVLRTRPMMPVRGTDEGHRTRSMPESSQARETAPSGGKRACDSGIQGLPTGSSDTVDGAESLFCVTLSMCDDASSADTTCAVAAPLRRGWRERLFEAAVDAAGVSEQARRKVFQSSSTHVCFVGKAVGSGGLAFVVKDGRCKHEIELLSRFAGNPAFGRLRGWVCDARNKYRYALVLDWLDAQPPTLKSTPVMALCFLRDALLALLVLRAEGFLHRDFKLGCMMFDWELVRWRLVDFDLAVRVDETGVAGGSVGTKLIDCQWSYPRLSQLDPPMNLECILPGHGASVTREGAGSFPPAN* # PASA_UPDATE: g10277.t1, single gene model update, valid-1, status:[pasa:asmbl_280,status:12], valid-1 NODE_1073_length_14213_cov_54.7059 . gene 13139 14091 . + . ID=g10277;Name=g10277.t1 NODE_1073_length_14213_cov_54.7059 . mRNA 13139 14091 . + . ID=g10277.t1;Parent=g10277;Name=g10277.t1 NODE_1073_length_14213_cov_54.7059 . five_prime_UTR 13139 13251 . + . ID=g10277.t1.utr5p1;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . exon 13139 13503 . + . ID=g10277.t1.exon1;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . CDS 13252 13503 . + 0 ID=cds.g10277.t1;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . exon 13788 13993 . + . ID=g10277.t1.exon2;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . CDS 13788 13993 . + 0 ID=cds.g10277.t1;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . exon 14085 14091 . + . ID=g10277.t1.exon3;Parent=g10277.t1 NODE_1073_length_14213_cov_54.7059 . CDS 14085 14091 . + 1 ID=cds.g10277.t1;Parent=g10277.t1 #PROT g10277.t1 g10277 MRPVARMTQRQGLPRRGAASGPLATLKGRPYLRRALLVFSFFAAIELVLFVGKIDNLHVYEVPHALAGYLAIYEPCSTPEKDLKDLETLVLIADDVCKENNLVCWADFGTLLGSSRHGTVIPWDTDADYSAMMKDRDLLSRALTAKGINVTRSV* # ORIGINAL: g10274.t1 original gene structure, not modified by PASA NODE_1073_length_14213_cov_54.7059 AUGUSTUS gene 4191 7733 . - . ID=g10274;Name=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS mRNA 4191 7733 . - . ID=g10274.t1;Parent=g10274;Name=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 7350 7733 . - . ID=g10274.t1.exon1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 7350 7733 . - 0 ID=cds.g10274.t1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 6794 7016 . - . ID=g10274.t1.exon2;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 6794 7016 . - 0 ID=cds.g10274.t1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 5827 6493 . - . ID=g10274.t1.exon3;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 5827 6493 . - 2 ID=cds.g10274.t1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 5325 5558 . - . ID=g10274.t1.exon4;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 5325 5558 . - 1 ID=cds.g10274.t1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 4887 5110 . - . ID=g10274.t1.exon5;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 4887 5110 . - 1 ID=cds.g10274.t1;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS exon 4191 4450 . - . ID=g10274.t1.exon6;Parent=g10274.t1 NODE_1073_length_14213_cov_54.7059 AUGUSTUS CDS 4191 4450 . - 2 ID=cds.g10274.t1;Parent=g10274.t1 #PROT g10274.t1 g10274 MSASSTTSARPRMFRHAQRTRIVLVAVALLALALYVAVTLLPAEFVQVADQQLHQFGGARQEPTQSRLIDDVAVTEVNLKLAQLRDDSDLFGSEGVQLISTSVKNVGSSWASASQQIETAQSARATKLGHGTSGASGAAVNAPAASKTEARLVASHSALSPSTVTVTGIHATSSSVQAAAINVPNPSQTSTSPVTVATQSATLLPSITNEVVQSTVNFRASNSPALSTRTQQSTPQLLDSETFLIADICQWGQTNQLMALTSAVNLACLLGRSLVEPVFCDTSANSKALTLAPLSKYFDVLALSRSLSDCINVNADKSGGSDATVTRKVTVIPLSEFQERFDPNVKAPVPGNAVTETDRSDIISSVGAADKSSGDMLLLWRSVHCLFFETDYYPPPMRSSVAPLFDVLHAKCGNATAIPRGTFDRSAAEAHITLSTKRFTGATLSEVSSDHSTYPGAEHSVVAAYWLFGVRVSGEAGQMQLSQLRPRQRLIDVASAFIRQFTPYISAHIRLGDFYNYCQSYFRRKGPSACGVNLDEAPAALAAAFHLSDFMHMHNMSLIIGSNGAPDEIKAIVDKLTGLLPESTPLVVISEVVHHYALTGSLPQSLSLSRINSYRRPVAHTESVSEASAENGVDYDASELALIEKLVLSCGQASGINFCLLIC* # PASA_UPDATE: g10273.t1, single gene model update, valid-1, status:[pasa:asmbl_278,status:12], valid-1 NODE_1073_length_14213_cov_54.7059 . gene 230 3121 . + . ID=g10273;Name=g10273.t1 NODE_1073_length_14213_cov_54.7059 . mRNA 230 3121 . + . ID=g10273.t1;Parent=g10273;Name=g10273.t1 NODE_1073_length_14213_cov_54.7059 . five_prime_UTR 230 238 . + . ID=g10273.t1.utr5p1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 230 313 . + . ID=g10273.t1.exon1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 239 313 . + 0 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 524 684 . + . ID=g10273.t1.exon2;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 524 684 . + 0 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 884 1063 . + . ID=g10273.t1.exon3;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 884 1063 . + 1 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 1454 1507 . + . ID=g10273.t1.exon4;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 1454 1507 . + 1 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 1893 1965 . + . ID=g10273.t1.exon5;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 1893 1965 . + 1 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . exon 2537 3121 . + . ID=g10273.t1.exon6;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . CDS 2537 3067 . + 0 ID=cds.g10273.t1;Parent=g10273.t1 NODE_1073_length_14213_cov_54.7059 . three_prime_UTR 3068 3121 . + . ID=g10273.t1.utr3p1;Parent=g10273.t1 #PROT g10273.t1 g10273 MAEINIMRSVPVHANVIRMLGVVTQSDPNCVVLEFAEHGDLRHYVMRKDRDFSAADLLALCIDVARGMEHLANCEIVHRDLAARNCMVVAGPRPPNAQETGWKLGPGAQVVCKIADFGLSKGTSDYYLAKSNTKLPVKWMSPESLQRRIFTHASDVWSFGITMWEILSRGDKPYAGLNNQEVAKYLADGNRLAPPTNCPRPLSSVLESCWRAHPETRPVMSRVVLQLRRAMASILSGRDDGDSGEAGGIDVSANAVVANQGVEPVKARKSTVGTDPGAAPHLTNTYALVMPEESGGGHLLSDSDADDEGQHHDRSRYAQMIPEQAQNDASDGAVVHPRETRVGGLSTIENKHFSTHC* # PASA_UPDATE: g10276.t1, single gene model update, valid-1, status:[pasa:asmbl_279,status:3], valid-1 NODE_1073_length_14213_cov_54.7059 . gene 10373 12626 . + . ID=g10276;Name=g10276.t1 NODE_1073_length_14213_cov_54.7059 . mRNA 10373 12626 . + . ID=g10276.t1;Parent=g10276;Name=g10276.t1 NODE_1073_length_14213_cov_54.7059 . five_prime_UTR 10373 10478 . + . ID=g10276.t1.utr5p1;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . exon 10373 10897 . + . ID=g10276.t1.exon1;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . CDS 10479 10897 . + 0 ID=cds.g10276.t1;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . exon 11049 11148 . + . ID=g10276.t1.exon2;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . CDS 11049 11148 . + 1 ID=cds.g10276.t1;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . exon 11397 12626 . + . ID=g10276.t1.exon3;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . CDS 11397 12296 . + 0 ID=cds.g10276.t1;Parent=g10276.t1 NODE_1073_length_14213_cov_54.7059 . three_prime_UTR 12297 12626 . + . ID=g10276.t1.utr3p1;Parent=g10276.t1 #PROT g10276.t1 g10276 MRSILAVFAAVVMAAASVQGLADAAGAPYDYCGAPLPGALDAPAGMRLASVQVVTRHGDRVPCNPFADDKTEWDCPMTSAEVPSIFDGDANDAVGGDDRGVLFAKTYTEGQSWRGSCMLCQLTKRGALQHRELGRALRRRYDATGVIPQSVDSDALFVRATDTWRTQQSAQSHILGLFEGTRDDANNGMHRKRRSTLPIYTRQYATDEMVPNDALCPRLGAWEKEIYAADEYISFLAKFKVLVDRMAPAFNVSGPTVNPTTVKDNAWGKWCNGMDFPVDPADYALMTAYANWDSNYSNPLGMSRLAMQPFMQTLLAQMDAHVAGGAAARYSVYSGHDSTLAPLISALQIGGNWPPYASHAIFELWRAHDVSGNTGGDNGWHVRVLYNAEVGILPGCDAEICPLAAFRSFVASMVDGPRDLACVSPMTSEADAAWAARAATWQSRIHDRYEMQGRARRAMRPRWGEWHGRPAQ* # ORIGINAL: g2491.t1 original gene structure, not modified by PASA NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS gene 7317 8330 . + . ID=g2491;Name=g2491.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS mRNA 7317 8330 . + . ID=g2491.t1;Parent=g2491;Name=g2491.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 7317 8330 . + . ID=g2491.t1.exon1;Parent=g2491.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 7317 8330 . + 0 ID=cds.g2491.t1;Parent=g2491.t1 #PROT g2491.t1 g2491 MQSGSSMGLGPRGTVAQSPTPGAPALGSVTAAQVASGNMPMNALRMVQQHQQQQQQQQQHMGPASFGTFDNGLGGSGGGGGGGMMSGGSNNSSFGNPMQSLGGFNQSHTVMGVPGAGMAQYAPNAGIHSGGGGVQGQGQGQGQAQMVPGGSMSVPHAGRQMTPLMVQAHPGSALRSPVVGGASGMGGPMGLPPGAVGGLVGANSMGQNIQGVAAAASSQVYNSQPMTQAMQQLLQQQQQQQQQQQQQQQQQQQQQQQQHRSEQGREQSHLFPGMALPPGGAGGRPGGLTLGASNVHAMSGGLMGASSMPPSAVAIAAGLAQPMGGGFPQSRQQAPHV* # ORIGINAL: g2489.t1 original gene structure, not modified by PASA NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS gene 208 3294 . - . ID=g2489;Name=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS mRNA 208 3294 . - . ID=g2489.t1;Parent=g2489;Name=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 2155 3294 . - . ID=g2489.t1.exon1;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 2155 3294 . - 0 ID=cds.g2489.t1;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 1655 1825 . - . ID=g2489.t1.exon2;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 1655 1825 . - 0 ID=cds.g2489.t1;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 877 1398 . - . ID=g2489.t1.exon3;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 877 1398 . - 0 ID=cds.g2489.t1;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 208 628 . - . ID=g2489.t1.exon4;Parent=g2489.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 208 628 . - 0 ID=cds.g2489.t1;Parent=g2489.t1 #PROT g2489.t1 g2489 MASGGDEQQQSPAALVAPAVDAPFLIPPSSLSSADETESHAMEGAHAAPMQMHAPMDDTVSVVGASSVGATAGDEGSERDVGAFGWDRVSRAPTDEGLARSSSEFESSVHNDDPDGDAELDSPTTDRDRHSPMAGGETEYSESVHPVGAAGGCVAPADVDTDMTRGLHEGGAYAAKEDSLAADTSCLVAKEGAEHAFGDEAGMDSESAAVTKMHADNSALIKLEVTDGDYAMTDAGEDNNIAQSEYSHFASPNPAVVEAAHEATFALGNGEGLIYCAAVVQPTPITNDGDSAVAPSTLLRPKSEAAEELSAVTPMVIGDACKTSPSSCAANESAVHCAATSETEPDSTSQIATKTATAVPRATAPNPRRKIFTSHSFAPGTRRLGVQKKEDPKVAEMRRARDMYILLLESTANFNGRILVNRTQTVPFLDQNTGTLQYANRWLPDASARMDESTHSTHPHVYPRRRWKVTSGSLATLPAEAPTPAPAVSADGANITTAAVGHVPFLQNVVADGEAMHDNGPSVPQSRGSLGTITMDSQMHVTMQPMPSHSQGLPPHMTVDQLMYMSPHVPPTAELQHVAPSMEDFLMPFDFIMPQTHPGQGPAVRQTPSFMSPHMSPLMQSPHMQPGSLQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQQQQQQQQQQLQQQQQLLQLQQQQQQLQLQLQQQLLLQQQQQQQQQQLNPFAESPTPPPQDMPTYGIRVRAFSTAELSRLPLNMREKPYECV # ORIGINAL: g2490.t1 original gene structure, not modified by PASA NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS gene 4277 6076 . + . ID=g2490;Name=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS mRNA 4277 6076 . + . ID=g2490.t1;Parent=g2490;Name=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 4277 4288 . + . ID=g2490.t1.exon1;Parent=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 4277 4288 . + 0 ID=cds.g2490.t1;Parent=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 4416 5213 . + . ID=g2490.t1.exon2;Parent=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 4416 5213 . + 0 ID=cds.g2490.t1;Parent=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS exon 5348 6076 . + . ID=g2490.t1.exon3;Parent=g2490.t1 NODE_1695_length_9669_cov_41.5502_potentialcontaminant AUGUSTUS CDS 5348 6076 . + 0 ID=cds.g2490.t1;Parent=g2490.t1 #PROT g2490.t1 g2490 MASETRRVKRRRIDSTGDEGPPASPPPLPDMNGTSRKLAQRRPLTDHLFESLERADLQNEAKSCLDYSRLHARATWGDVASQIEHDAGTDGLTNPTTAAAAALDTENAIADHFLRTVAHATTDIERFVRQYSAPLVAVVCGRIYTAMWTAIQANPFDVTVDLTLSADSVDAELRKASPELFATHWAKGRTRVAGPRVTGSALRAAVNNAAKILADEIAVSLVADANGNTNPDAVCVHIDLSAIFVLYQPLTAMEKSATGGVDAGTDERLTEDELRDLENAESLNSSVGSDAADLTAAEGEEATASDMDFLASDDDDDDYDAAAEEDHRGLLRRSLHGHNSGGHRGKKESRTHKHRESIGDPAAAVSKTEKRKSSRADKKSSPSTAAAVKTAPPPIVSGGANAIPGARKSASSSSDDSDGAANGAERATRSGFDDVLLELCGGAGATLKMNAKADGRDHTMLAKSTKASTKAIATVAGADVEGKTVVEDARSEKKKRKRDKKKSKKDKRENRG* # ORIGINAL: g12879.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 6545 8004 . + . ID=g12879;Name=g12879.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 6545 8004 . + . ID=g12879.t1;Parent=g12879;Name=g12879.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 6545 6929 . + . ID=g12879.t1.exon1;Parent=g12879.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 6545 6929 . + 0 ID=cds.g12879.t1;Parent=g12879.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 7316 8004 . + . ID=g12879.t1.exon2;Parent=g12879.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 7316 8004 . + 2 ID=cds.g12879.t1;Parent=g12879.t1 #PROT g12879.t1 g12879 MYLGVNVNEDKLIESARHLRHELSVRLARRINDMNQLPFIAGCNPHIQTVYRCYVDAFNHFRTFPDIQTLEDEKGFVDVLRQCLGMHRDIIPTLKDAAWDIAEHMPRGELNAFLSKMITTRISRRVLAEHHLALHSAFYSGSGSRSVGRIGIVDEYCNPSTLVRAAAHYVQQQCDRAYGAHPEVRVEGHLDATFSYLPSHIEYMAAELLKNSARAVMERHALASVHPPPIVVTVCMGGTEITMRISDQGGAIDPDAMEYLWSYVPMPARLEQAQALKGTDATSMSRSRERVARQLNLVPGEVHDARTLPSIGFGMPMTRAYAAFLGGSLQVQNLSGYGVDAYVRLKHISDTEESFEI* # PASA_UPDATE: g12885.t1, single gene model update, valid-1, status:[pasa:asmbl_67,status:3], valid-1 # PASA_UPDATE: g12885.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_66,status:12], valid-1 NODE_101_length_40154_cov_46.595 . gene 31698 34386 . - . ID=g12885;Name=g12885.t1 NODE_101_length_40154_cov_46.595 . mRNA 31698 34386 . - . ID=g12885.t1;Parent=g12885;Name=g12885.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 34294 34386 . - . ID=g12885.t1.utr5p1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 33984 34055 . - . ID=g12885.t1.utr5p2;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 34294 34386 . - . ID=g12885.t1.exon1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 33936 34055 . - . ID=g12885.t1.exon2;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 33936 33983 . - 0 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 33527 33734 . - . ID=g12885.t1.exon3;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 33527 33734 . - 0 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 33216 33384 . - . ID=g12885.t1.exon4;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 33216 33384 . - 2 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 32897 33027 . - . ID=g12885.t1.exon5;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 32897 33027 . - 1 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 32678 32760 . - . ID=g12885.t1.exon6;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 32678 32760 . - 2 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 32277 32373 . - . ID=g12885.t1.exon7;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 32277 32373 . - 0 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . exon 31698 31925 . - . ID=g12885.t1.exon8;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . CDS 31864 31925 . - 2 ID=cds.g12885.t1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . three_prime_UTR 31698 31863 . - . ID=g12885.t1.utr3p1;Parent=g12885.t1 NODE_101_length_40154_cov_46.595 . mRNA 31698 34226 . - . ID=g12885.t1.1.5b6be70a;Parent=g12885;Name=g12885.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 33984 34226 . - . ID=g12885.t1.1.5b6be70a.utr5p1;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 33936 34226 . - . ID=g12885.t1.1.5b6be70a.exon1;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 33936 33983 . - 0 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 33527 33734 . - . ID=g12885.t1.1.5b6be70a.exon2;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 33527 33734 . - 0 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 33216 33384 . - . ID=g12885.t1.1.5b6be70a.exon3;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 33216 33384 . - 2 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 32897 33027 . - . ID=g12885.t1.1.5b6be70a.exon4;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 32897 33027 . - 1 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 32678 32760 . - . ID=g12885.t1.1.5b6be70a.exon5;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 32678 32760 . - 2 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 32277 32373 . - . ID=g12885.t1.1.5b6be70a.exon6;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 32277 32373 . - 0 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . exon 31698 31925 . - . ID=g12885.t1.1.5b6be70a.exon7;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . CDS 31864 31925 . - 2 ID=cds.g12885.t1.1.5b6be70a;Parent=g12885.t1.1.5b6be70a NODE_101_length_40154_cov_46.595 . three_prime_UTR 31698 31863 . - . ID=g12885.t1.1.5b6be70a.utr3p1;Parent=g12885.t1.1.5b6be70a #PROT g12885.t1 g12885 MKMFGFGGGGDEASKLKLTSAQKDKARQFVSFTQASITTAAQYLSKHQYNLEAAVDDFFQHGGSAGTASRQEKEKKIVVVFEKYRDDPAEDAIGPSGMEKLCADLEVDPSDVIMLLVSWKMGAAQMCVFTRAEFVKGMIDMGCDTLEQLKAHLPALRKETNDDAKFRELYQYTFLFGKEPAQKSLSLQTAIALWNLVLIDKFKFLELWCQFLEEHHNKAISKDTWNLLLDFSSSINDDMTNYDSEGAWPVLIDEFVDYAREKLAK* #PROT g12885.t1.1.5b6be70a g12885 MKMFGFGGGGDEASKLKLTSAQKDKARQFVSFTQASITTAAQYLSKHQYNLEAAVDDFFQHGGSAGTASRQEKEKKIVVVFEKYRDDPAEDAIGPSGMEKLCADLEVDPSDVIMLLVSWKMGAAQMCVFTRAEFVKGMIDMGCDTLEQLKAHLPALRKETNDDAKFRELYQYTFLFGKEPAQKSLSLQTAIALWNLVLIDKFKFLELWCQFLEEHHNKAISKDTWNLLLDFSSSINDDMTNYDSEGAWPVLIDEFVDYAREKLAK* # ORIGINAL: g12880.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 8709 11518 . - . ID=g12880;Name=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 8709 11518 . - . ID=g12880.t1;Parent=g12880;Name=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 11491 11518 . - . ID=g12880.t1.exon1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 11491 11518 . - 0 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 10444 11246 . - . ID=g12880.t1.exon2;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 10444 11246 . - 2 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 10181 10258 . - . ID=g12880.t1.exon3;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 10181 10258 . - 0 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 9815 9899 . - . ID=g12880.t1.exon4;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 9815 9899 . - 0 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 9528 9661 . - . ID=g12880.t1.exon5;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 9528 9661 . - 2 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 9262 9345 . - . ID=g12880.t1.exon6;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 9262 9345 . - 0 ID=cds.g12880.t1;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 8709 9029 . - . ID=g12880.t1.exon7;Parent=g12880.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 8709 9029 . - 0 ID=cds.g12880.t1;Parent=g12880.t1 #PROT g12880.t1 g12880 MSSDEDEDSPVLSDGDDSDFGSGGKRGKSTKASGKAGKQRATGTARVGVRGPVEVSSPRKRQTARNATKAAKATPKGKKAAATPVGSRKRKAADSESDSNSDSDSDDGDSDDSDAFSADSNVNEGDEDGDYYEDARPNNKTASAKKQSPRSVRKPTVRKQTPVSAPRPVAIDLTDDDEDAPPHAMEVDLSSDDGDLVAMRLVSAKKAPSPKKASRSGGASVGDVHIDGYGGGVASSHLFGVGSAGAAGDIESGASQGLVSSQGASQDATKGKKAKMVIQSAIPIVVPHARRHTTFIMETNEPELDLSGDTGAVGRFTVVGDEESPIVLDLKGQFAFDTYRKLNRHATITGFLFKGNLRSCASLMVVNIGAQVAKVEAVIDRYLHCNHASNVLDTETLVEGQLEEDLDEVSAAVTDVWRMDEEGDAPSQGKHKKAKKGGDFLSSEDVARKAGSKAKPKAKSKAKGKAGVPKRKKATAGGAAKKPKKVYSGTKKTKSKNGEPAKKRRRTTSE* # PASA_UPDATE: g12882.t1, single gene model update, valid-1, status:[pasa:asmbl_69,status:3], valid-1 NODE_101_length_40154_cov_46.595 . gene 21086 24661 . + . ID=g12882;Name=g12882.t1 NODE_101_length_40154_cov_46.595 . mRNA 21086 24661 . + . ID=g12882.t1;Parent=g12882;Name=g12882.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 21086 21454 . + . ID=g12882.t1.utr5p1;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 21616 21658 . + . ID=g12882.t1.utr5p2;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . exon 21086 21454 . + . ID=g12882.t1.exon1;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . exon 21616 23256 . + . ID=g12882.t1.exon2;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . CDS 21659 23256 . + 0 ID=cds.g12882.t1;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . exon 23550 24661 . + . ID=g12882.t1.exon3;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . CDS 23550 24444 . + 1 ID=cds.g12882.t1;Parent=g12882.t1 NODE_101_length_40154_cov_46.595 . three_prime_UTR 24445 24661 . + . ID=g12882.t1.utr3p1;Parent=g12882.t1 #PROT g12882.t1 g12882 MSKRRSSDAEVPDAPIEDDGFVVHSIRGNDVKIGQDMPFVLLDGMKRNGDLFDIINRINDSVSDGRLASVDEVLVEFERLLTKRSKSTPPATNAEKRLAEDARTVDSNGENVSAAAQAQGVDAQNGGAADSDEAGRDCGADGESGADENEEDDSDDEEASDVDDDDDFDLGLEFSTRVLGGKKRAEVNLHALEKYGLPVTWIVEIRDGSASDVNDGNSVRAHMSTLSMLQDVLARNGIVKHIEKLIVREWDGSKSIEDCAIAACSKMLSHCCVCQSSFPRQAVGLMTCAELFCQFRYEEATEGSMALSLRTQPEVARLRLQMALATLQSERPFEPFPGNFVDGSCAAPDRGTIEVLQKGIGKDRLATVANSRQKQALIAAVEKAYEYVSELCNVLTSKTVDSDIKEKSASAPPAPAPNSWRDRKQRSAPVATPVSPAAKKERAKRKSSINLEELASDAAIERRIGVEAATALRFLLAGNRTLIIPSHAPLADKDASQKYLVAIPPDQEERFQALRQDRGGSFYVFHGSRAYNWYSILCNGVKNTSNSALMTTGAVHGAGIYSSPNSATAMAYSQGDNLVPQMLAVCEVAGKISDYTKTSEILVIPDERALVVRMLIAPRSFQFTTTALEAKIRSRLSYNLGLMTSPLTHADSTAVDAAGGKGRVGGGRISNTSTARLMRDVAELRATDCESLGFEVEPDDDSLSHWDVRFFNFDATSPLSADMRSQGHDFIHGRMEFPADYPFSPPFVRIISPRFVARTGHVTYGGSICAEFLVAGHGWTSSYTITTVLMSVRDLLCGGGGRLDPQNKAPYSDQEARAAFTLARKTHGWD* # ORIGINAL: g12886.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 34639 36188 . - . ID=g12886;Name=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 34639 36188 . - . ID=g12886.t1;Parent=g12886;Name=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 36047 36188 . - . ID=g12886.t1.exon1;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 36047 36188 . - 0 ID=cds.g12886.t1;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 35362 35879 . - . ID=g12886.t1.exon2;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 35362 35879 . - 2 ID=cds.g12886.t1;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 35074 35197 . - . ID=g12886.t1.exon3;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 35074 35197 . - 0 ID=cds.g12886.t1;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 34639 34862 . - . ID=g12886.t1.exon4;Parent=g12886.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 34639 34862 . - 2 ID=cds.g12886.t1;Parent=g12886.t1 #PROT g12886.t1 g12886 MASGDIASECGAMQTEELDVIKAIYGDDVAEMIGGDVRVLGVCVRSDGRRPLEMRILIPTLYPLSSAPLYEAASDWASRDPSHSMQIASGLDAIACEAPGEIILFRWIEWLREYVADNAPLLNPVASTAATPVASASSASSRASAVADDDGYEYYHADDGAEESCGAAVDYMSLADEPVRGGASAPDAAWECPDIRSGDPFVDRRSTFQAHVARVVSKAQVQQVLAVLKSNRKIAHATHNIMAYRMDGTSEATCIQDCDDDGEQAAGGRLLHLLQVNGVRNAVVVVSRWYGGIQLGPDRFRHINNCAREALLMAGVLGPAHTGKDDKGKGTKKRK* # ORIGINAL: g12877.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 1380 3122 . + . ID=g12877;Name=g12877.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 1380 3122 . + . ID=g12877.t1;Parent=g12877;Name=g12877.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 1380 3122 . + . ID=g12877.t1.exon1;Parent=g12877.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 1380 3122 . + 0 ID=cds.g12877.t1;Parent=g12877.t1 #PROT g12877.t1 g12877 MIAASFSSLPVEVVREFIVPHLSPSDVMALSHTCSFLRLFLADITPLILSRTCAQSYADNADFRARVHAAVSPDRIVVRLSDDHEPDSMLDRALSAHGTCRCRSDYSALSCAREVRISDNCVFDALSLLSGVRSVSLLRCHAVEDVSALSCAHTVELVECARVSDVSALGGVYTLNLSRCQLLSDVSALGRVHNLNLSFCPRISDVSALGGVHTLNLSNCRAVTDVSFLGRVYSLNLSGCIGIVDVSALKNVHELDLSSCVQVTDLSAVGGVHTLVLHRTVVNDVSMLGTVRHSLTITACPTLTDVSALGNLHTLNISHNVSLEDVRALRSVHTLRLMWSVALCDVSALGGVHTLDLGHCLSLSDVSSLGGVHWLSLSHCEKVSDVSALGRVHTLNLRGCKSITDVSMLGGVHTLTLFGCIRLRDVSALGSVHSLLLDGCVNVEDVSALGGVNNLSLCGCISVKDVSALGRVCTLSLAGCVGVVDVSALSSVCALRLDGCNGITDVSALGSVVRLSLLRCSRIKRMPENRAAGTRIVCPNGRIIRTYRNVSGPDARIRQSSGALSRWRELSPPSFPCSVM* # ORIGINAL: g12878.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 3442 5751 . - . ID=g12878;Name=g12878.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 3442 5751 . - . ID=g12878.t1;Parent=g12878;Name=g12878.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 3442 5751 . - . ID=g12878.t1.exon1;Parent=g12878.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 3442 5751 . - 0 ID=cds.g12878.t1;Parent=g12878.t1 #PROT g12878.t1 g12878 MAGRAPADAPQPTPASFLRVIYNVTQKITNHLKAGVVTDEHTLSQISHKLRRAFAILAANPPSDTQSGSNAPEDAVASEGTQPHPGEDVSGNSTLVGTTPVDNVDCARQPSKVAQKSPGHPPISNSKIEHELALRDDAFDAHAHGTGEDNNAWSRDDRSGPSAGDARFGESAGIAMEDAVAPVASVASVASLTVQAPQISNSVQHDEPEAGDPSVRNYTMPRSSPPESASSMVCDADDTESIALRRSSLLASKRKRTEDADEPLPKQSRTVLARSVGGGKEFDLPATYSTLMDSPHYGDGSGVGVVVDGGASVPPTESRYLPPTPDHVTHTHRPSVSDKDAIVTHSAPPFAPSHNAGVALVADTMQRLDTDSRSGDMRHHAVVARDPDPASLATKIAPVTRPRVRTAFYASPLVPTEPSRQTEPIRGSGPPNRTTYPVHERRRDLSESRDANSPRDDAETRALRVVERISPAASLRASSWSVVLKACQTLPTVEVVPHMGSRQRVTDPSSLTFLPTPAGLAALDGMCVTLARTGHIQPDACVVINGTAWTQEYLSAFCGFARRVAVADATITRLRRFAWEFSEAQKHAVFETLAESKLDLDLLYGMRVGTLLDVILSRRDELPVLAMVTVARVICRASGCPDDGIIFVAEMKPVAAVLASRSSHPRGVFFTLDSPLVESGAGWAVALHWNDSRMCCSSLEFRQFKRACAPHGFVLDGCVYRQAKQGSTKLTSLGCALSFFMRLQADVEKPVLEFCKRLVQLTVPQLQRN* # PASA_UPDATE: g12876.t1, single gene model update, valid-1, status:[pasa:asmbl_65,status:12], valid-1 NODE_101_length_40154_cov_46.595 . gene 117 1120 . - . ID=g12876;Name=g12876.t1 NODE_101_length_40154_cov_46.595 . mRNA 117 1120 . - . ID=g12876.t1;Parent=g12876;Name=g12876.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 965 1120 . - . ID=g12876.t1.utr5p1;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . exon 846 1120 . - . ID=g12876.t1.exon1;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . CDS 846 964 . - 0 ID=cds.g12876.t1;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . exon 595 616 . - . ID=g12876.t1.exon2;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . CDS 595 616 . - 1 ID=cds.g12876.t1;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . exon 117 255 . - . ID=g12876.t1.exon3;Parent=g12876.t1 NODE_101_length_40154_cov_46.595 . CDS 117 255 . - 0 ID=cds.g12876.t1;Parent=g12876.t1;3_prime_partial=true #PROT g12876.t1 g12876 MVNVYKSRCLWTGALLFTFGCIFSFPPLFTLTKNPRLLLTAHLEGTQNGMYILIVGLLWDHLSLGGFGQALLYWSLQFGTWLNYFPWLLGAVT # ORIGINAL: g12884.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 29159 31403 . + . ID=g12884;Name=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 29159 31403 . + . ID=g12884.t1;Parent=g12884;Name=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 29159 29253 . + . ID=g12884.t1.exon1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 29159 29253 . + 0 ID=cds.g12884.t1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 29506 29591 . + . ID=g12884.t1.exon2;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 29506 29591 . + 1 ID=cds.g12884.t1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 29925 30227 . + . ID=g12884.t1.exon3;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 29925 30227 . + 2 ID=cds.g12884.t1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 30605 30736 . + . ID=g12884.t1.exon4;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 30605 30736 . + 2 ID=cds.g12884.t1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 30883 31050 . + . ID=g12884.t1.exon5;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 30883 31050 . + 2 ID=cds.g12884.t1;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 31336 31403 . + . ID=g12884.t1.exon6;Parent=g12884.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 31336 31403 . + 2 ID=cds.g12884.t1;Parent=g12884.t1 #PROT g12884.t1 g12884 MIRHVLLISSSGTVLFEHEFKGGAARLLAQPRLTGSLLTAILSLCDEVVGSRASYVELSSVSLSVCADVASARSDVTSVSLSSSNATSPRASGVICAVFHDAEDGEDFGRIVALQMLRSFVGMHSSELTRQVPVVAVGVFGAFAGRLREPLRNCALPVLEQLQGVRGVEKCVLSDRHHVIHATSSIEPLSFVANLNPLMSCALDLLSTRSQPLECVVMDYAQCRVFVAKVAAMHLTVVCRLSVASSHVQLQVTAAAGILQRVLKEIVQLSGNLSVESFAAGSH* # ORIGINAL: g12881.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 12773 19791 . + . ID=g12881;Name=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 12773 19791 . + . ID=g12881.t1;Parent=g12881;Name=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 12773 12842 . + . ID=g12881.t1.exon1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 12773 12842 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 13067 13158 . + . ID=g12881.t1.exon2;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 13067 13158 . + 2 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 13313 13432 . + . ID=g12881.t1.exon3;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 13313 13432 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 13795 14076 . + . ID=g12881.t1.exon4;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 13795 14076 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 14307 14426 . + . ID=g12881.t1.exon5;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 14307 14426 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 14656 14904 . + . ID=g12881.t1.exon6;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 14656 14904 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 15223 15342 . + . ID=g12881.t1.exon7;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 15223 15342 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 15582 19196 . + . ID=g12881.t1.exon8;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 15582 19196 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 19420 19791 . + . ID=g12881.t1.exon9;Parent=g12881.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 19420 19791 . + 0 ID=cds.g12881.t1;Parent=g12881.t1 #PROT g12881.t1 g12881 MGQKGSREAVRPAATDALTREEDDVRPREFSDVTPHWDALSRSKEFDLVPGSVLRIDHGHEYTGHTSGITCMATHEHLLFTAGVDGDVRVWNVATHTCDAVLRGHTSAVTCLGKVDDVLVSGGEDGVLRLWDVSTDESIGALEGHTGSITCLAALSGGFVCSGSADKTVRVWNLEASDSSSYRRHCHATGECVHTLTGHTGWVTCLCTSGERLYTGSDDYTVRVWDITTGECVATMEGHTGWVTCMKIDGNRLYTGGADRTLRVWSVALCAGTAIFKGHTLTVTCLDSFQNHVVTGSADGNVRVWMLNDRDEPITTKVLSGHTNWVCKLKMWNGLIVSGSHDRTVRIWDCMMGDCLKVLGIAPEADPPALTRTFQASLSDLDETQAHEPPVYTFEAPTLPPPPPQQQQSQQQQPHQFEFSVHEPAPPPPYEAEYGEALWAISDVHMSDGLVFACASDGAVRMWSVRDFIVAHPNRSIVSLERLLRTDAIEWIDLSNNSIMDFPADSSLPSLRYIDLSRNFLNELPASLLRSRSLQIIKAGKNRIESIGRCELPRLRYCDLSENSIVSMSKTFAACGNLRVLLLYRNALASLPSTLRMPKLQHLDLSRNQLRLLPDTLSECVDLRALLLAHNKIDVLQPRLCSLTRLDVLDIDGLPLQTPPAHVTCLGVAAVLGYLRDLESSASPCSHVRVMVLGEESAGKTTLVRALLQTPNRILGFKDVCGPYLATDGIDIQSVELELGIDDVIGGVGQWTNAVEIDDAADACRAAGATRAGRRQGSSDNIGSGMNASPRGLKTAAATLQGAPLSPLSTPSDVDTLPADTTDATAQSHTNTQKAASDGRRKNPRTEALQLRQEMQRKQMEELGRFRAQRVSLASTHGGGRGSVEDAAPDASASGSVHTNTGRRPLSPSSSNSPMSPSSSTESGSGPSSPRRTNPLLSSTATTATASSTAQTSIEVRMWDFAGQEIFHASHLFFMSEGAVFLLVWDAVNLPSHSRVGQWLALIAARVPSARVVIAATHVDDPRCTVAQLTAGMTMLDSILSKHAQNIRVVSRVFVSSKTGEGVGDLRAALSAAVSSLDHVKTLVPTKYVLLDSALASHRTRSPPVLSFDEFASIGSGLGIDRADGIRRAATYLHNVGSIVWFDVPGLRHFIVAEPRFLVDVFSSVVSFRHNFFRNGGITHDALARLWFEKGYGSDLLPFALSLFRRFGLSFKCEDAGVEVFPCRLPDGLPPESWWPPHPDATQRQLAYELVFGGIGAVPPGLFPQLIARLQRVERPGLYHARHLVYLDTPDRVKIELLEAECAVVVCVRGPTPGLAMSAAVSDVHAVVKQWYPSVEMDVRAICSGCLSDLFLPPNRIELPKKYRRQQKTGLITGTSAGGDGSNQGGRGDCAFAPGSKRAHHTHTHLNSASQSASHDGLEFRSHIITSEKPPDYTRSSEVVVCEDGHAVPLHWLFEGCAAADGPAGGDKAPTQRARQPGALQADIEATSPRYFVMLPDDAQRTWGEPRSWFGRAFSLHLLCEYPNEQHFISGHKGYPVIQPREFMCKYAGHIALVMQIVLKSSAFVVPGLIAASDLVPAEVRKLGKDDLAAFKHLGDVARDIRADAGSTGFKAIVDGARGRALESFLRKADEGLEWAGLQRVRMANGEIMWLCEHHAHLVLPPRRSVDPARDLGGVGPEV* # PASA_UPDATE: g12887.t1, single gene model update, valid-1, status:[pasa:asmbl_70,status:3], valid-1 NODE_101_length_40154_cov_46.595 . gene 36563 38533 . + . ID=g12887;Name=g12887.t1 NODE_101_length_40154_cov_46.595 . mRNA 36563 38533 . + . ID=g12887.t1;Parent=g12887;Name=g12887.t1 NODE_101_length_40154_cov_46.595 . five_prime_UTR 36563 36765 . + . ID=g12887.t1.utr5p1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . exon 36563 36867 . + . ID=g12887.t1.exon1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . CDS 36766 36867 . + 0 ID=cds.g12887.t1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . exon 37322 37398 . + . ID=g12887.t1.exon2;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . CDS 37322 37398 . + 0 ID=cds.g12887.t1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . exon 37743 37827 . + . ID=g12887.t1.exon3;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . CDS 37743 37827 . + 1 ID=cds.g12887.t1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . exon 38128 38533 . + . ID=g12887.t1.exon4;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . CDS 38128 38493 . + 0 ID=cds.g12887.t1;Parent=g12887.t1 NODE_101_length_40154_cov_46.595 . three_prime_UTR 38494 38533 . + . ID=g12887.t1.utr3p1;Parent=g12887.t1 #PROT g12887.t1 g12887 MASRVVQGKAAAKPPVKGVSMQRPAVLTTDHVQRYLDENAVLLQAIVEYQNLKRLDECQVYQKRLHENLVYLANNADGNPETANQMKKMHYVTQDGKPHPASAQNVLPTTPTQTPTQAPTQAPTGQPFGHAQQPTVTASDPPVTTVPTVAVEAPVAVPDGSAEGETIAAAETIAAATTTTAAAAAAAPAEDGGENGDAPTPMEVDQAAL* # ORIGINAL: g12883.t1 original gene structure, not modified by PASA NODE_101_length_40154_cov_46.595 AUGUSTUS gene 24813 28517 . - . ID=g12883;Name=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS mRNA 24813 28517 . - . ID=g12883.t1;Parent=g12883;Name=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 28411 28517 . - . ID=g12883.t1.exon1;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 28411 28517 . - 0 ID=cds.g12883.t1;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 27237 28257 . - . ID=g12883.t1.exon2;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 27237 28257 . - 1 ID=cds.g12883.t1;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 26545 26643 . - . ID=g12883.t1.exon3;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 26545 26643 . - 0 ID=cds.g12883.t1;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS exon 24813 26219 . - . ID=g12883.t1.exon4;Parent=g12883.t1 NODE_101_length_40154_cov_46.595 AUGUSTUS CDS 24813 26219 . - 0 ID=cds.g12883.t1;Parent=g12883.t1 #PROT g12883.t1 g12883 MAYYYDGDDERAVDFPEEDAYGSRGFDSDEEGDKRSNSDGAFDSDLEDRILGEVFYKSKLDDTLTQDISALSGGDANNSTSFQVDAIGTNSDMKKKKRRKRQKPMTDGSGVGGAQTVVIDANAAISPIPISIRTSTPNNNSSAAKLERKMQRAKAIASVRAAVGGGNTQSLSRGSNGGESDLSDANENSNEDDADSKYRLTKTPTKKATGAAAVSTQHTRPTDTAGVIDLRSDSSDSDDDIAVADGKRSAALARVAKTDASMDEIDSGSETGDSLIALNVSGLHNGSDSEMEEGEHTDQSADGGINAPLLASTPTARAVILPSQSNLNDNSVSSDYSEYTTDDDEGSSGAEEDEALRKKISAEWKVDAADDPELAKIMKRYYKGATEFSATCYNCDEKGHLSRDCPKERKVLPCFLCGNIGHSKRDCPDEVCFNCGRGGHKSRDCKLRRVGRHERCRRCQMAGHIERSCPELWRQYHWTLDVGRKGDLVRCRVEDDGTGGKGKSRRKHEHCYNCGSTGHYGHECAEDRMEGSGSASAPFVATYDSALRSGGGGEREGRSASAIDHGEDASGAGVDKGRRRSEGSAGVGSRNGRANWEDLRRSLGSRGGRNDAGNRSAHMRFEASDEEMGGRGSDAQTHRSHSREHGRQPTRDPPRDVARDVRDAKERECERGNGGGGGRPGTLSERFGRIDATAGDGQRRKRGRDADADAEENGGDDARSYKRPRTEEQVGRRDDRNNANAAPPHGRRSYGGYSGANSGRQEFSGGEGDRRRSGGGGGGGRRQQFDDGDRMPHSMSGRGGYSHHSHAQQQQQRPNDVYGGAYGGDGYSRGARSGGGGSGGGGRGGRGRGERRDEWDGGDDSKHAPLYRGGYRRFSKN* # ORIGINAL: g459.t1 original gene structure, not modified by PASA NODE_557_length_21247_cov_47.6448 AUGUSTUS gene 14456 16310 . - . ID=g459;Name=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS mRNA 14456 16310 . - . ID=g459.t1;Parent=g459;Name=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 16006 16310 . - . ID=g459.t1.exon1;Parent=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 16006 16310 . - 0 ID=cds.g459.t1;Parent=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 14870 15635 . - . ID=g459.t1.exon2;Parent=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 14870 15635 . - 1 ID=cds.g459.t1;Parent=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 14456 14623 . - . ID=g459.t1.exon3;Parent=g459.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 14456 14623 . - 0 ID=cds.g459.t1;Parent=g459.t1 #PROT g459.t1 g459 MLSSGVIKGPCPAYAKLHGPDFELYIRSLAVGLVVSGGGGPNASEYGQVALVAPEDPACHAQLMFNFSTGRFDLLGTSASSIVAVNGNVLSAVHAPYSLESKQLVQVQNCCFYFLLPITTRSGGGFNGVGIIPSQQSTQFTVGDTSTKGRTNSPKQTRGPSLTGTNTPSPQVEEKLSPGRQSADKIPPTPTGVQTESHQSGLTSGASTESPGGRQSTAAAKRVGQPRRRLSSSASLSANHFIAPRQLPAGVARPLAGGLVSAGTTALQIHAHVLAAHGSPAHAGLASAGALPGNALGTIILPPFMTSPTVRPPFTFEELAHHAFLQTCRRWLSVEEVTDAVRHLYPYFRDADPKSWEVPLRLALAASRGFTKCVGPGDPSDPKSTRTLYGVASVTAMHAQQQTASGAHQPTQ* # ORIGINAL: g456.t1 original gene structure, not modified by PASA NODE_557_length_21247_cov_47.6448 AUGUSTUS gene 5096 7111 . - . ID=g456;Name=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS mRNA 5096 7111 . - . ID=g456.t1;Parent=g456;Name=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 6998 7111 . - . ID=g456.t1.exon1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 6998 7111 . - 0 ID=cds.g456.t1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 6666 6824 . - . ID=g456.t1.exon2;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 6666 6824 . - 0 ID=cds.g456.t1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 6377 6532 . - . ID=g456.t1.exon3;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 6377 6532 . - 0 ID=cds.g456.t1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 6041 6163 . - . ID=g456.t1.exon4;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 6041 6163 . - 0 ID=cds.g456.t1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 5566 5787 . - . ID=g456.t1.exon5;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 5566 5787 . - 0 ID=cds.g456.t1;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 5096 5218 . - . ID=g456.t1.exon6;Parent=g456.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 5096 5218 . - 0 ID=cds.g456.t1;Parent=g456.t1 #PROT g456.t1 g456 MLPPPPSMPPAKLASQTPSTSIERATGLFAQLKLRQPVKDEDEEEIAPLRDDAAPVGILTQSVTHSFAPAGGLPKVQCPRCGAQVLTVMEQDHKNSHSTELFSYLFLGGMRNAHNKKELVTRTGVTTIINVAEEVPNVFEFCPVTCTCTNGVDGCIGRNGDDVARSLPRLFTYFSLKIKDKAGEDIFPIFDRVYDIVEEARVRGNILLHCVAGMSRSGAVAIAYAMRSQRWTLRQAYDHVRSLRPIVSPIPYFIEQLQMYEKILVADGDIDGVGLDALPTLTVDDVYPKGTRFIKSSA* # ORIGINAL: g457.t1 original gene structure, not modified by PASA NODE_557_length_21247_cov_47.6448 AUGUSTUS gene 7536 9688 . - . ID=g457;Name=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS mRNA 7536 9688 . - . ID=g457.t1;Parent=g457;Name=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 9635 9688 . - . ID=g457.t1.exon1;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 9635 9688 . - 0 ID=cds.g457.t1;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 8581 8776 . - . ID=g457.t1.exon2;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 8581 8776 . - 0 ID=cds.g457.t1;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 7996 8246 . - . ID=g457.t1.exon3;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 7996 8246 . - 2 ID=cds.g457.t1;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 7536 7826 . - . ID=g457.t1.exon4;Parent=g457.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 7536 7826 . - 0 ID=cds.g457.t1;Parent=g457.t1 #PROT g457.t1 g457 MDEFSKLSTKACTNCHHEANGRRNTKWQHQSSPAVAMYQNSHAIYRAPNTRFVVKGRNILAGDALNIVDINDAAYDMHMELVIDLHNAPLLAAVNTLLAQVAAMAPQVAAMPPQVAAMAPIPGQVAALSAQLAALPAILASVQDTIRIRALNHNLQERAALNILPVTRTAPGPLPPGLLGRHPPAQAALTTFIAAPWVDRIVTYRGLPRGANSHCVFPDTKAAIAVMTELEIVLLMVFYGDSMGIIDNDPLSTMRAKVVAFLG* # PASA_UPDATE: g455.t1, single gene model update, valid-1, status:[pasa:asmbl_8161,status:3], valid-1 NODE_557_length_21247_cov_47.6448 . gene 1742 4962 . + . ID=g455;Name=g455.t1 NODE_557_length_21247_cov_47.6448 . mRNA 1742 4962 . + . ID=g455.t1;Parent=g455;Name=g455.t1 NODE_557_length_21247_cov_47.6448 . five_prime_UTR 1742 1888 . + . ID=g455.t1.utr5p1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 1742 2015 . + . ID=g455.t1.exon1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 1889 2015 . + 0 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 2436 2542 . + . ID=g455.t1.exon2;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 2436 2542 . + 2 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 2815 2879 . + . ID=g455.t1.exon3;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 2815 2879 . + 0 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 3288 3372 . + . ID=g455.t1.exon4;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 3288 3372 . + 1 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 3678 3743 . + . ID=g455.t1.exon5;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 3678 3743 . + 0 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 3922 4173 . + . ID=g455.t1.exon6;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 3922 4173 . + 0 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . exon 4394 4962 . + . ID=g455.t1.exon7;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . CDS 4394 4552 . + 0 ID=cds.g455.t1;Parent=g455.t1 NODE_557_length_21247_cov_47.6448 . three_prime_UTR 4553 4962 . + . ID=g455.t1.utr3p1;Parent=g455.t1 #PROT g455.t1 g455 MSSLSLLDAATVGDTDAIRELLRDPNIDIDRPNSYGHTPLMNAAFNGFDDIVKLLIDKGADLNVRDIHDETPLMVAAKNGHIVVVKRLVGAGAELTLRDRLGYTAHDLARNHPDVEEYLFGLKANIVERTARGIYNLGASVYNLVVGPPVPEDTRTGPHPPRHYSRTSRWQSVPNVSAADRTMRTSDVTAASAPNIGDAARRQEEKTPYAQTHAQPQTQTQAPTQPPATHILHRDGSQGAMPASTSVTSHTDSDGISFESPFGRPRVRSVADLDLSNMGGMLGAES* # ORIGINAL: g460.t1 original gene structure, not modified by PASA NODE_557_length_21247_cov_47.6448 AUGUSTUS gene 17727 20319 . - . ID=g460;Name=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS mRNA 17727 20319 . - . ID=g460.t1;Parent=g460;Name=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 20314 20319 . - . ID=g460.t1.exon1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 20314 20319 . - 0 ID=cds.g460.t1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 20076 20205 . - . ID=g460.t1.exon2;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 20076 20205 . - 0 ID=cds.g460.t1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 19271 19901 . - . ID=g460.t1.exon3;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 19271 19901 . - 2 ID=cds.g460.t1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 18453 19037 . - . ID=g460.t1.exon4;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 18453 19037 . - 1 ID=cds.g460.t1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 18228 18333 . - . ID=g460.t1.exon5;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 18228 18333 . - 1 ID=cds.g460.t1;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS exon 17727 17831 . - . ID=g460.t1.exon6;Parent=g460.t1 NODE_557_length_21247_cov_47.6448 AUGUSTUS CDS 17727 17831 . - 0 ID=cds.g460.t1;Parent=g460.t1 #PROT g460.t1 g460 MQPRVWQYTTDIAAAKLILVSSIHFPRETPYFNWDELSKQDLDGAELPRAVGFPRVISHFPPKRAYLADRVLRAIGVSWMQVLELRSKVRARCFLGLKMDVAKCLGHYARRHPEINIDMFYPKSFIFTVDPKAFNVTATQFLAYNANLLLKMQPTVALSGVSGTDKTLPLLFNTNATAGEDELDQPASEDDVGMVDYGGSGDVEEDAERTEAQEEPRAAAGIAGTRRLLAVSSNAEAPTEVSGVGLTMPRWLVKLGTRSFGGEGIRVFSDTTALISVAKQGVKEGPLVVQRLIDNVMTFRGRRFDLRVYILVTSLSPLNLYINVQGTVVRLAAGDAQPPVSVNAGGSEADDGHGTSVQSEYDGDATNAVSPGAQQSADPKGELDRRKFLTNFSVHHDASALVTLEELLAYFRSIKLLGVWKDRTLPSIKRIARRVFSLWNTHEHREYSYKLWGIDIMLDSGMNAWYIEANPRPMMFGLTKANFKNQHRIMVADMFEVVFWRHHGQVMQPSNTWEIISNEV* # PASA_UPDATE: g454.t1, single gene model update, valid-1, status:[pasa:asmbl_8163,status:12], valid-1 NODE_557_length_21247_cov_47.6448 . gene 188 1183 . - . ID=g454;Name=g454.t1 NODE_557_length_21247_cov_47.6448 . mRNA 188 1183 . - . ID=g454.t1;Parent=g454;Name=g454.t1 NODE_557_length_21247_cov_47.6448 . five_prime_UTR 1123 1183 . - . ID=g454.t1.utr5p1;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . exon 1077 1183 . - . ID=g454.t1.exon1;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . CDS 1077 1122 . - 0 ID=cds.g454.t1;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . exon 824 885 . - . ID=g454.t1.exon2;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . CDS 824 885 . - 2 ID=cds.g454.t1;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . exon 566 673 . - . ID=g454.t1.exon3;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . CDS 566 673 . - 0 ID=cds.g454.t1;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . exon 188 218 . - . ID=g454.t1.exon4;Parent=g454.t1 NODE_557_length_21247_cov_47.6448 . CDS 188 218 . - 0 ID=cds.g454.t1;Parent=g454.t1;3_prime_partial=true #PROT g454.t1 g454 MEEDRVKALFDAASSGDASRIVELVKGGVPVNSTDETGMTPLMHAAFKGHEDACKALLGLKADPNATSHKNMYTALMFSAMA # PASA_UPDATE: g458.t1, single gene model update, valid-1, status:[pasa:asmbl_8162,status:12],[pasa:asmbl_8165,status:12],[pasa:asmbl_8166,status:12], valid-1 NODE_557_length_21247_cov_47.6448 . gene 10177 14225 . + . ID=g458;Name=g458.t1 NODE_557_length_21247_cov_47.6448 . mRNA 10177 14225 . + . ID=g458.t1;Parent=g458;Name=g458.t1 NODE_557_length_21247_cov_47.6448 . five_prime_UTR 10177 10419 . + . ID=g458.t1.utr5p1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 10177 10499 . + . ID=g458.t1.exon1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 10420 10499 . + 0 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 10798 10891 . + . ID=g458.t1.exon2;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 10798 10891 . + 1 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 11068 11415 . + . ID=g458.t1.exon3;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 11068 11415 . + 0 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 11696 11971 . + . ID=g458.t1.exon4;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 11696 11971 . + 0 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 12196 12780 . + . ID=g458.t1.exon5;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 12196 12780 . + 0 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . exon 13097 14225 . + . ID=g458.t1.exon6;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . CDS 13097 13762 . + 0 ID=cds.g458.t1;Parent=g458.t1 NODE_557_length_21247_cov_47.6448 . three_prime_UTR 13763 14225 . + . ID=g458.t1.utr3p1;Parent=g458.t1 #PROT g458.t1 g458 MKSFANIKSNINKGLTKVRQMAEEKFKSGEKNSELTAEMQEAEERVGSTKSAFEHFLKMMEHYLTGGTKLDREKRLKKLPITRLANTMHEDAANVGDECLLGSVLSIIANAETLLSEITADFETDVDAKVIQKMNEIMKRDIKEVLDARKKLAQAKSELESAKKKYVNATEPEKVQQTEEEYNIAKDDYEQWFGVTEARLGDFVASEPTYVLPLVEFISAQAVFHATAGEFLKEIVTSLRQQCESASSPVVFGRPLVDHLESTGRQVPIIVEDCINAISKSGVEAEGIFRLSGNATRIKKLRGAYNTEKPKVDLSAEEYVNDIHAVSGVLKLYFRQLPDPLLTNALYPQWVAAGNQPRDERLPAVKALVEQLPPAHYTTLRHLMRFLAVIASNSDVNKMRPSNLAIVFGPTLLWSPDDDPNSLMASGAQSSVVECLVQNCDAIFGVDSSSGPAVPPKVAKKAPPPPASSDDAPTASKRKAPPPPAERPVHTATAATPAPAPAPAAVVSQDAPPPVARRPPPLPSQPPAHPSTKESSVSPATSDAPHFARSDSSEGATDGGAALAAPPRPNRTARPATVVIDPTKMQPQLIDIGAPPAAAGSAPPPVQPRPRPPPISAAAVSAAAAAAAPAPGSPIDTSVPASLSAPLEPLHLGGAALPSKQGPPRPRPPPPVVKSGSKADLL* # PASA_UPDATE: g5204.t1, single gene model update, valid-1, status:[pasa:asmbl_7661,status:12], valid-1 NODE_483_length_22767_cov_43.9491 . gene 95 3288 . - . ID=g5204;Name=g5204.t1 NODE_483_length_22767_cov_43.9491 . mRNA 95 3288 . - . ID=g5204.t1;Parent=g5204;Name=g5204.t1 NODE_483_length_22767_cov_43.9491 . five_prime_UTR 3168 3288 . - . ID=g5204.t1.utr5p1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 3146 3288 . - . ID=g5204.t1.exon1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 3146 3167 . - 0 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 2728 2914 . - . ID=g5204.t1.exon2;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 2728 2914 . - 2 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 2315 2469 . - . ID=g5204.t1.exon3;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 2315 2469 . - 1 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 1884 1978 . - . ID=g5204.t1.exon4;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 1884 1978 . - 2 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 939 1345 . - . ID=g5204.t1.exon5;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 939 1345 . - 0 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 523 664 . - . ID=g5204.t1.exon6;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 523 664 . - 1 ID=cds.g5204.t1;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . exon 95 270 . - . ID=g5204.t1.exon7;Parent=g5204.t1 NODE_483_length_22767_cov_43.9491 . CDS 95 270 . - 0 ID=cds.g5204.t1;Parent=g5204.t1;3_prime_partial=true #PROT g5204.t1 g5204 MVVRGLEAFLKERNLVRKDPLSVLKDTRIGIDGFHWLRTRVFPTEAFSPALGAVPFTLRSRIKKELTKLREAGITPVFVFNGLQLNRNAPGVDPRQAKRNMAWDAYEQGKKDAAVGFWSYSAQITADTINFTMQVLRENNVEFFRAPYLSAAQLVWLEQPKQGYVHAIYGSTDLMLFNVARVILSMDTDEGTFTWADRGALLGDTGLNDEQLCDACLFAGMDACPTFPAIDTNLSNSYNQSHSVFVTRAIELLVPHGNWMQVLSMYSNDPVVQKNNYGEQYQRARAMYRHNVVLEHGGICEPLNKETAPSDMHALLGPRLPNEIYFLLSQGLISPLVPINLVSAVLLENPPLCGGETLEYRQLVDMLTDLRAKTIGVLSQSLPDFFKTRRIVTI # ORIGINAL: g5205.t1 original gene structure, not modified by PASA NODE_483_length_22767_cov_43.9491 AUGUSTUS gene 6307 7935 . - . ID=g5205;Name=g5205.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS mRNA 6307 7935 . - . ID=g5205.t1;Parent=g5205;Name=g5205.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 7260 7935 . - . ID=g5205.t1.exon1;Parent=g5205.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 7260 7935 . - 0 ID=cds.g5205.t1;Parent=g5205.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 6307 6947 . - . ID=g5205.t1.exon2;Parent=g5205.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 6307 6947 . - 2 ID=cds.g5205.t1;Parent=g5205.t1 #PROT g5205.t1 g5205 MSIQPSPTVQRIEPIANVFAANAHSVWARPAPPAVAEAASALPAAGQAVAAVAAARPAGPPAPRPVVAATPSVQAPLKNVANPNESPTSKSRLPTTRPPAVERHCNKSVVTVNKIGYLADNALWERTSRGRRPVQSTCIGGDQGGTWRDHVFQPRCAAQNYTQITGKDALKCLSGMKVKWIMLLGDSNSRNLYDHIFMGISGHGLPPSVYADLHLSAHEVGPPYYDLPDCEGRHSDRDRYVKLGDTTVLKISLRFIQRTSRLRTMLTGNWTPEQWNALQYWKGAAHPDGSDLGPYDKTPPEFENFTRGMYPDAIVVNYGLWLTVNGLKDFEESYSQFNNNLRHIPTRLAMTSGGIRWHTLFTDANVLEQDEFVLAAGERFGFPVINFREMISPVPIEERMVDGMHFASFVYQMLAKAIMGQLCKWETVVKCRDEVKSQ* # ORIGINAL: g5208.t1 original gene structure, not modified by PASA NODE_483_length_22767_cov_43.9491 AUGUSTUS gene 20657 21766 . - . ID=g5208;Name=g5208.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS mRNA 20657 21766 . - . ID=g5208.t1;Parent=g5208;Name=g5208.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 21697 21766 . - . ID=g5208.t1.exon1;Parent=g5208.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 21697 21766 . - 0 ID=cds.g5208.t1;Parent=g5208.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 20657 21561 . - . ID=g5208.t1.exon2;Parent=g5208.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 20657 21561 . - 2 ID=cds.g5208.t1;Parent=g5208.t1 #PROT g5208.t1 g5208 MNSDELRGKADEIAALLMSPLGLGALKDVDLTALLGRADNVADDSLRAFLGPSPVQQLSATPSYDMSGLGMNGMGGLGAMGGMNALSFAGNPMFGLTNAFAAGAAQRLMGQRMAELAESLSRTPYVSESVSKTAAAARGGKGMAAIAPKHTPMQASSGVPCLAVSANLASPVPSDDGVPVSPSIADSEDTCVAPRGGDYAGSRGGMKRRQSECDGEAVTASKRQRFDSDAASVDDGSDGSKECVSEEEKRRRNCVASARFRQKKKKELRQLEDIAQQKTEECDKLHVRVRTLEQELNYLRSIVSLCTAVPKFGGLGAPFMGFAV* # ORIGINAL: g5209.t1 original gene structure, not modified by PASA NODE_483_length_22767_cov_43.9491 AUGUSTUS gene 21931 22134 . - . ID=g5209;Name=g5209.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS mRNA 21931 22134 . - . ID=g5209.t1;Parent=g5209;Name=g5209.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 21931 22134 . - . ID=g5209.t1.exon1;Parent=g5209.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 21931 22134 . - 0 ID=cds.g5209.t1;Parent=g5209.t1 #PROT g5209.t1 g5209 MYPFGSSGLLPSDSAPNDLALYHLESPTSCAKRPHDLALYHLESPTTVKGLALALYHIESPTVAIVI* # ORIGINAL: g5206.t1 original gene structure, not modified by PASA NODE_483_length_22767_cov_43.9491 AUGUSTUS gene 14634 18055 . + . ID=g5206;Name=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS mRNA 14634 18055 . + . ID=g5206.t1;Parent=g5206;Name=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 14634 14921 . + . ID=g5206.t1.exon1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 14634 14921 . + 0 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 15095 15785 . + . ID=g5206.t1.exon2;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 15095 15785 . + 0 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 15970 16181 . + . ID=g5206.t1.exon3;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 15970 16181 . + 2 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 16346 16475 . + . ID=g5206.t1.exon4;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 16346 16475 . + 0 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 16729 16777 . + . ID=g5206.t1.exon5;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 16729 16777 . + 2 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 16944 17129 . + . ID=g5206.t1.exon6;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 16944 17129 . + 1 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 17307 17440 . + . ID=g5206.t1.exon7;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 17307 17440 . + 1 ID=cds.g5206.t1;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS exon 17553 18055 . + . ID=g5206.t1.exon8;Parent=g5206.t1 NODE_483_length_22767_cov_43.9491 AUGUSTUS CDS 17553 18055 . + 2 ID=cds.g5206.t1;Parent=g5206.t1 #PROT g5206.t1 g5206 MYGYGCKTPCACENGAACDRNDGKCTCAFGWRGPVCNLVVSPPVPKLNATVESTQLGIGVGIRLRWSFDEDTGSQRAWPAWRYEISRLGCTPEAFQVSDELTFFDTNVTLNQGYSYFIVVYNSKNVSSQMSSFAGIQNLLKIDPPAVPSGISSIPTLNPATQTSMIKFSWKEDTSSGPIIKSIISRDGQIILDGPTATEYNDRDVQFGRTYLYEIISVNQYGNSTTARFNETASVGPNDPSGGTPSAAASSSANVAGPVAGGVVGAVVGMAAVVLAILFARKRASQKKMEALVRSELALIDTVVRRPEIAELEIPGSCIVLRQRIGEGEFGEVYLAEVSPRGGGAPIKAAVKTFKTSQMSTIDEIRSARSAFMSEIDLMRVIPTHANVIELLGVCTQSEPNSMVLEYASHGDLRQFLCNNKATAFTSTDFLCFCIGKQGVDIARGMEHLARCQIVHRDLAARNCMVVAGPRAPNPFESGWKISSKAQVIIKVADMGLSRDTAAGDYYVAKTRRKLPVKWMAPESLDKRVFTGSSDVWAFGVVMWEVFSRGAKPYPGLENHAVSAYLASNARMGCPPDCPPAAYAIMESCWKRLPETRPQFAQLVNHLRRTTALLCGGGEVARSESVSGTPQPSVNTTPRASVVVPPRTSVSATSRARVVVPPRLSIGTTPRGNATQRAGSISVSEVAPRWTLDETYMLTIPEFEGRYVELRTDDEGSNYVETQQYQSFEI* # PASA_UPDATE: g5207.t1, single gene model update, valid-1, status:[pasa:asmbl_7659,status:12],[pasa:asmbl_7660,status:12], valid-1 NODE_483_length_22767_cov_43.9491 . gene 18480 19973 . + . ID=g5207;Name=g5207.t1 NODE_483_length_22767_cov_43.9491 . mRNA 18480 19973 . + . ID=g5207.t1;Parent=g5207;Name=g5207.t1 NODE_483_length_22767_cov_43.9491 . five_prime_UTR 18480 18624 . + . ID=g5207.t1.utr5p1;Parent=g5207.t1 NODE_483_length_22767_cov_43.9491 . exon 18480 18844 . + . ID=g5207.t1.exon1;Parent=g5207.t1 NODE_483_length_22767_cov_43.9491 . CDS 18625 18844 . + 0 ID=cds.g5207.t1;Parent=g5207.t1 NODE_483_length_22767_cov_43.9491 . exon 19148 19973 . + . ID=g5207.t1.exon2;Parent=g5207.t1 NODE_483_length_22767_cov_43.9491 . CDS 19148 19827 . + 2 ID=cds.g5207.t1;Parent=g5207.t1 NODE_483_length_22767_cov_43.9491 . three_prime_UTR 19828 19973 . + . ID=g5207.t1.utr3p1;Parent=g5207.t1 #PROT g5207.t1 g5207 MEVSAMPTSSAPSVSVSRSTSAAPATVKPPAPTTTCTVGGNGGSTSPRLNARYVRLNVGGRLFLTSLDTLLKQGDNMFSAMFSGRMEIDRDSDGYVIIDRDGRLFAQVLNYLRDGTLPIPETRSARAELMSEAKFYLVDGLVDLLQKHEDRISIFDYRPICTVPIIATAEEEKTILASTEKPVIKLNYNRNNNKYSYTSNSDDNLLKNIELFDKLSLKFNGRVMFLKNVKCSNDICSWVFFGNGNKVAEICCTSLAYATEKKHTKIEFPEAKIFEEVLNVLLFEPHFTAIEREHGLVPV* # ORIGINAL: g4935.t1 original gene structure, not modified by PASA NODE_13245_length_261_cov_99.7796 AUGUSTUS gene 2 261 . + . ID=g4935;Name=g4935.t1 NODE_13245_length_261_cov_99.7796 AUGUSTUS mRNA 2 261 . + . ID=g4935.t1;Parent=g4935;Name=g4935.t1 NODE_13245_length_261_cov_99.7796 AUGUSTUS exon 2 261 . + . ID=g4935.t1.exon1;Parent=g4935.t1 NODE_13245_length_261_cov_99.7796 AUGUSTUS CDS 2 261 . + 2 ID=cds.g4935.t1;Parent=g4935.t1 #PROT g4935.t1 g4935 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL # PASA_UPDATE: g3340.t1, single gene model update, valid-1, status:[pasa:asmbl_1873,status:12], valid-1 NODE_1529_length_10697_cov_38.8916 . gene 8502 10277 . - . ID=g3340;Name=g3340.t1 NODE_1529_length_10697_cov_38.8916 . mRNA 8502 10277 . - . ID=g3340.t1;Parent=g3340;Name=g3340.t1 NODE_1529_length_10697_cov_38.8916 . five_prime_UTR 10222 10277 . - . ID=g3340.t1.utr5p1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . five_prime_UTR 9822 9928 . - . ID=g3340.t1.utr5p2;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . exon 10222 10277 . - . ID=g3340.t1.exon1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . exon 9766 9928 . - . ID=g3340.t1.exon2;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . CDS 9766 9821 . - 0 ID=cds.g3340.t1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . exon 9512 9609 . - . ID=g3340.t1.exon3;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . CDS 9512 9609 . - 1 ID=cds.g3340.t1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . exon 9207 9301 . - . ID=g3340.t1.exon4;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . CDS 9207 9301 . - 2 ID=cds.g3340.t1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . exon 8502 8921 . - . ID=g3340.t1.exon5;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . CDS 8565 8921 . - 0 ID=cds.g3340.t1;Parent=g3340.t1 NODE_1529_length_10697_cov_38.8916 . three_prime_UTR 8502 8564 . - . ID=g3340.t1.utr3p1;Parent=g3340.t1 #PROT g3340.t1 g3340 MESGGYAAGGKQFHPQCLKCVTCTKVINPIDGVFVSPQGIECDACMRAGVGDCKRCGAVLDGEIVKSALGCFHLRCFNCDGCKKTISGNHYGVGARSIFCEACHTSAAIKCGRCFMVVGGRFAKINGATFHVACISCSVCGGRILADDGSNASATLGSLLVSDAKPYHAKCMACAKCAFVFNAGDKIAKTPEGMHLCEKCV* # ORIGINAL: g3338.t1 original gene structure, not modified by PASA NODE_1529_length_10697_cov_38.8916 AUGUSTUS gene 301 4253 . - . ID=g3338;Name=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS mRNA 301 4253 . - . ID=g3338.t1;Parent=g3338;Name=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 4188 4253 . - . ID=g3338.t1.exon1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 4188 4253 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 3763 3998 . - . ID=g3338.t1.exon2;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 3763 3998 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 3441 3573 . - . ID=g3338.t1.exon3;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 3441 3573 . - 1 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 3184 3282 . - . ID=g3338.t1.exon4;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 3184 3282 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 2389 2852 . - . ID=g3338.t1.exon5;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 2389 2852 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 2041 2195 . - . ID=g3338.t1.exon6;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 2041 2195 . - 1 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 1677 1777 . - . ID=g3338.t1.exon7;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 1677 1777 . - 2 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 1350 1488 . - . ID=g3338.t1.exon8;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 1350 1488 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 1011 1144 . - . ID=g3338.t1.exon9;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 1011 1144 . - 2 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 622 762 . - . ID=g3338.t1.exon10;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 622 762 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 301 399 . - . ID=g3338.t1.exon11;Parent=g3338.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 301 399 . - 0 ID=cds.g3338.t1;Parent=g3338.t1 #PROT g3338.t1 g3338 MEGFVCRLLQRSHAVVGGIVPPLMNHHSGAVLVADLSGFTSFTETIARDDQNGTEKLMEILNRIFAIVISCVYGEGGDILKFAGDAFLAVFPYDTCDGTESESMSEAICAALSAGLALQSKLGSHTQVGEVQLRLRVGIAAGDFQVLHVGNESAMELVMSGPAIEAAKKCEASAESGQVVADKETWASASSKGVVIGKKGNVVNGALKPGGGHLAPGLFNSQRGSHLQILLSESTVSPSRRMSNFINNGALASSSSNLATHRKSIAQTSDFSGKLNAATQSVLISKRRSIVDRLTTLIRPISRSSLSGGQSTQAFSYLAPTMPDLPAAGRRSRDANSIEDPIMRRYVPKPVLTALDANQGDMWVSHLRIVTVVFVKIDGKLDFCEENTPRILQSAFETVYLTTTALEGQLNKFVCFDKGPTFLVAFGLPPHKHENDAFRGLVAAAGIQRTLAARGLETSIGVTTGRVFCGVLGSSIRREYTVIGDSVNLSARLMVASQGTILCDQDTCEKSRIQGLERKPGIRVKGKRDEVDAYVLRRDNPAVVNAMPSMDDGRTTRRGSTRISVVEDTTARPLLRRVSDISSVSMESM # ORIGINAL: g3339.t1 original gene structure, not modified by PASA NODE_1529_length_10697_cov_38.8916 AUGUSTUS gene 5466 8223 . + . ID=g3339;Name=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS mRNA 5466 8223 . + . ID=g3339.t1;Parent=g3339;Name=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 5466 5559 . + . ID=g3339.t1.exon1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 5466 5559 . + 0 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 5752 5812 . + . ID=g3339.t1.exon2;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 5752 5812 . + 2 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 5955 6107 . + . ID=g3339.t1.exon3;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 5955 6107 . + 1 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 6194 6264 . + . ID=g3339.t1.exon4;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 6194 6264 . + 1 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 6471 6555 . + . ID=g3339.t1.exon5;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 6471 6555 . + 2 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 6827 6918 . + . ID=g3339.t1.exon6;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 6827 6918 . + 1 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 7140 7236 . + . ID=g3339.t1.exon7;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 7140 7236 . + 2 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 7562 7828 . + . ID=g3339.t1.exon8;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 7562 7828 . + 1 ID=cds.g3339.t1;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS exon 8037 8223 . + . ID=g3339.t1.exon9;Parent=g3339.t1 NODE_1529_length_10697_cov_38.8916 AUGUSTUS CDS 8037 8223 . + 1 ID=cds.g3339.t1;Parent=g3339.t1 #PROT g3339.t1 g3339 MAPHLWLRAEVKPHEHRTPLTPSTCIKLISEGFRITVEKSSDRIVPEAEYKQVGCDVAEAGTWVDAPADAFIVGLKELPESDAPLRHRHIYFGHAYKNQEGWRQLLGRFVRGGGRLLDMEFLMDDKGRRVAAFGYMAGFAGSAVGLQLWAHQRLSPNTPLGAISHSPNDATLIASIKAQLEQARAANGGKFPTVHVIGALGRCGSGAVDFAVAAGIPSENIVRWDLAETKAGGPFPQILDSDIMVNCIYLSSPIPPFLTHDVIAAAHNRRLSVIVDVSCDTTNPHNPLPIYTKTTTFDAPALTVPTSGKPDLEVVAIDHLPTLLPLESSGRFADDMLASFLQLKEYDAAPVWVNVSKLYDEKSEGITA* # PASA_UPDATE: g6188.t1, single gene model update, valid-1, status:[pasa:asmbl_2549,status:12],[pasa:asmbl_2550,status:12], valid-1 NODE_1760_length_9345_cov_41.4167 . gene 1615 4479 . + . ID=g6188;Name=g6188.t1 NODE_1760_length_9345_cov_41.4167 . mRNA 1615 4479 . + . ID=g6188.t1;Parent=g6188;Name=g6188.t1 NODE_1760_length_9345_cov_41.4167 . five_prime_UTR 1615 1887 . + . ID=g6188.t1.utr5p1;Parent=g6188.t1 NODE_1760_length_9345_cov_41.4167 . five_prime_UTR 2117 2445 . + . ID=g6188.t1.utr5p2;Parent=g6188.t1 NODE_1760_length_9345_cov_41.4167 . exon 1615 1887 . + . ID=g6188.t1.exon1;Parent=g6188.t1 NODE_1760_length_9345_cov_41.4167 . exon 2117 4479 . + . ID=g6188.t1.exon2;Parent=g6188.t1 NODE_1760_length_9345_cov_41.4167 . CDS 2446 4416 . + 0 ID=cds.g6188.t1;Parent=g6188.t1 NODE_1760_length_9345_cov_41.4167 . three_prime_UTR 4417 4479 . + . ID=g6188.t1.utr3p1;Parent=g6188.t1 #PROT g6188.t1 g6188 MDVYRCLWGSGSTVCGHVFSSGVRLHRHLQEHVDAHHHEIRVRGSIHRPCKWQGCPFQSTLKGVRSHIHTHAPREYKCHMCGRTYRQIQGLRRHVRDSCGRMLPPGAGSTAIVGLASRVDSSQSDGSGDAMNAGDMTDNDNPDSPSESRDEDGVDESGSATGNLLASRQPQESLLSGPIGISLPTNGATKFDSTHFAPGDYARSERPDDTRGAPFSRPMSPVMSLPHNTNINNNNNNNNNNSNNNNNNNNNNNNNNNNNNNNNPRVPPPKPDFPRHKAVPNAHSPSLAYQPGYPPPAAMMRRAGLLDAFSSTPLVVQVPTPPPSAFSGSGGSSNGGSQPSAQGQMQGQPASMYGMSGMQQQQQLHQQQKYHHHASQHQPPPLTLKGPHSQLPQLIVSHDEHDGHAVRRIGASLVGPNDTRAPYAMMPGMGPAGVVNLPPPQFQGTGDIAELILEAACEGNVAAVEFLLRVQARVSGTPVRVARDHSGKTALHVAALRGPAELVKLLCDSMPGNAVWICDSQGRTPLHLAAVGNHPDIAEYLIQRGADVHATDADGRTVLHLAAINRAELSHFVSKYGVQFNQRDAYHKTASDYMQTQVHQQLQQQQQPHIGPLSLSAEAEPPPLEPFQMPVPRNSVSNGGGPQYPSGGPLPLRWTW* # ORIGINAL: g6189.t1 original gene structure, not modified by PASA NODE_1760_length_9345_cov_41.4167 AUGUSTUS gene 5197 7737 . + . ID=g6189;Name=g6189.t1 NODE_1760_length_9345_cov_41.4167 AUGUSTUS mRNA 5197 7737 . + . ID=g6189.t1;Parent=g6189;Name=g6189.t1 NODE_1760_length_9345_cov_41.4167 AUGUSTUS exon 5197 7389 . + . ID=g6189.t1.exon1;Parent=g6189.t1 NODE_1760_length_9345_cov_41.4167 AUGUSTUS CDS 5197 7389 . + 0 ID=cds.g6189.t1;Parent=g6189.t1 NODE_1760_length_9345_cov_41.4167 AUGUSTUS exon 7576 7737 . + . ID=g6189.t1.exon2;Parent=g6189.t1 NODE_1760_length_9345_cov_41.4167 AUGUSTUS CDS 7576 7737 . + 0 ID=cds.g6189.t1;Parent=g6189.t1 #PROT g6189.t1 g6189 MSPQHQQRQQQQQQQQQQKQQQQQPVTDPFAVQPNASGAASAVPSRDGRSLTYVDARDPDLADYEEVSHEFEEDALGTPLREYRKSVSEGDSTFVFPVFNPRPFIPSMALREYEEPPNASAGMQGSSEPPSRTSFEIDGIMSRNSSGTVFTPADLLSRSTATLHSLDESNSGRRGSSVGLAAGPLSSSSSLPIDDPPLTEEELRKIRLAIAAASTADVTGLTACLDAGVSVNARDPETRRPLLMHASAATGCVDVCKLLVARGCDLNLSDITGATPLHCAALRGDAPLVRMLVKAGASPSSADTNKTTPLHLVAGNPAHLECTIALVEQGAPINAPDASGVTPVSLLPELQELQIRLVESAASALKSDAVSARTVALRSLGAIGSNAECHKSLLGALAQEVDAFVACCRDSATAGDAAAMLARMLSHGPAAHQGTSTFMLKALQALLASGPADDPGPTGALELMRALTERDDKERDHRASMARVAVQPLLAALSPPTTHRVRVLAATVLAATTPYLPMQTRLNSADCLCALLSAIERETSTLDVLIPLLNAIADVAENAACHAALEEAKLREMMLRLLAHTNARVRHEACRALVCVGHLDVGNAYLYGEKGVNGPIVYQTTTEGRQIRGCRLVKVVELLLWSGDAPSVSLSLSSLSAPIPVQYEFVDFVLRTYHTFTSPIVLLRLIVHCFRQPALSVGFNFRIKEALDPLFSSDSDHKDVPIPPLHNRIIQLFRTWLEHHLSDFEIDAVLRSELQRLLAALFNVGDPYRAQAMKLMSFLDKKVG* # ORIGINAL: g9457.t1 original gene structure, not modified by PASA NODE_5983_length_664_cov_96.6316 AUGUSTUS gene 42 278 . - . ID=g9457;Name=g9457.t1 NODE_5983_length_664_cov_96.6316 AUGUSTUS mRNA 42 278 . - . ID=g9457.t1;Parent=g9457;Name=g9457.t1 NODE_5983_length_664_cov_96.6316 AUGUSTUS exon 42 278 . - . ID=g9457.t1.exon1;Parent=g9457.t1 NODE_5983_length_664_cov_96.6316 AUGUSTUS CDS 42 278 . - 0 ID=cds.g9457.t1;Parent=g9457.t1 #PROT g9457.t1 g9457 MASGTYILFIDDDDVAVPKMVELLMRTASRTHADVITGFAQNFEVGLDGRRVIKRTSLSAGSTEESMMYIHHAGKSNVM # ORIGINAL: g8122.t1 original gene structure, not modified by PASA NODE_3324_length_3736_cov_44.6711 AUGUSTUS gene 515 3410 . + . ID=g8122;Name=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS mRNA 515 3410 . + . ID=g8122.t1;Parent=g8122;Name=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 515 577 . + . ID=g8122.t1.exon1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 515 577 . + 0 ID=cds.g8122.t1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 1294 1465 . + . ID=g8122.t1.exon2;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 1294 1465 . + 0 ID=cds.g8122.t1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 1695 1774 . + . ID=g8122.t1.exon3;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 1695 1774 . + 2 ID=cds.g8122.t1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 2285 2479 . + . ID=g8122.t1.exon4;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 2285 2479 . + 0 ID=cds.g8122.t1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 2945 3112 . + . ID=g8122.t1.exon5;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 2945 3112 . + 0 ID=cds.g8122.t1;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS exon 3336 3410 . + . ID=g8122.t1.exon6;Parent=g8122.t1 NODE_3324_length_3736_cov_44.6711 AUGUSTUS CDS 3336 3410 . + 0 ID=cds.g8122.t1;Parent=g8122.t1 #PROT g8122.t1 g8122 MDWSRTNEHELVTAGQDRLVKPFGEGLLSVIVPQLRHNESSRHHVHLWSRRNLKTPVHAYVGHSDIVREFDWRVRGSDDFREFQLVTWSKDQTLRLWRIDPQHQQACGHTPRGLLLTDLEPHPIDNPGSAKGGDAAAQKGVAASSVLYGGDLTQEFANINFNMPNVVIEKFNATHRNCVIAARGVGGHMLRVLISFPALYPNNASPSFEFLGNTTVPTSVKARLTEQCESLRLFLLGCLGVNGLNAQKAF* # ORIGINAL: g2818.t1 original gene structure, not modified by PASA NODE_4565_length_1456_cov_61.8718_potentialcontaminant AUGUSTUS gene 306 1047 . - . ID=g2818;Name=g2818.t1 NODE_4565_length_1456_cov_61.8718_potentialcontaminant AUGUSTUS mRNA 306 1047 . - . ID=g2818.t1;Parent=g2818;Name=g2818.t1 NODE_4565_length_1456_cov_61.8718_potentialcontaminant AUGUSTUS exon 306 1047 . - . ID=g2818.t1.exon1;Parent=g2818.t1 NODE_4565_length_1456_cov_61.8718_potentialcontaminant AUGUSTUS CDS 306 1047 . - 0 ID=cds.g2818.t1;Parent=g2818.t1 #PROT g2818.t1 g2818 MSADFVSSALPCTTSGLCQSSNTVVSGGHAPGTSLIVDDRETAVIQFLKHLPSVERKRIHYGDFAIVAGTDRLVCVFERKTLKDFANSIHDGRWKNMDNLLELRKTTGCAIMLIIEGNPWTQTTTRIQKIPFGVLRNLLLDMAVVHNVPHIWSKDCSATADLLVDMTATMFSKWAAPTPSAPTQTGGADLLSVPVQKSDDRILMEIWNSIPFVSVIAAECLGRLYTLNDLAKGSVTAAALKLVRLPG # ORIGINAL: g10445.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 20425 25638 . + . ID=g10445;Name=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 20425 25638 . + . ID=g10445.t1;Parent=g10445;Name=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 20425 20708 . + . ID=g10445.t1.exon1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 20425 20708 . + 0 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 20859 22792 . + . ID=g10445.t1.exon2;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 20859 22792 . + 1 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 22920 23027 . + . ID=g10445.t1.exon3;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 22920 23027 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 23234 23514 . + . ID=g10445.t1.exon4;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 23234 23514 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 23646 23749 . + . ID=g10445.t1.exon5;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 23646 23749 . + 0 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 23920 24062 . + . ID=g10445.t1.exon6;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 23920 24062 . + 1 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 24275 24354 . + . ID=g10445.t1.exon7;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 24275 24354 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 24583 24646 . + . ID=g10445.t1.exon8;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 24583 24646 . + 0 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 24777 24986 . + . ID=g10445.t1.exon9;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 24777 24986 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 25121 25243 . + . ID=g10445.t1.exon10;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 25121 25243 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 25436 25638 . + . ID=g10445.t1.exon11;Parent=g10445.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 25436 25638 . + 2 ID=cds.g10445.t1;Parent=g10445.t1 #PROT g10445.t1 g10445 MASAEGAGSTDSAPPSTPAQTRDSSDAHALGDSGGGLGDAGCSGCSSLAAQLAETTSGRDKLRGNLHKLRAKMIETGKLIELFNRNKNDIRHLHWLQINRDAVESSDLHLQLVKALQETEPLREQLRSRESELAGARAVLAQTENSLSASRVLVLQLRAETAESKELRSTADRTAKELSKLTRESAAREEQLHALTKAKSQANAEARAAREAIKALESRVASLQSGIMQRDAIEMQLRVRVREVEEENARLRRILGESLVDGGRLNLADGRSVDAVPGEVAPQSAPVRRGRGRAVGVSAVRGRGSTTRGSVRGSVRGSVRGLAVRAGGRGGARGRAVGKDAARSGALSLSESGSESDSQSEPAVTRRKSPARPRRSHARLSSSGSESESGSESESDSGSDGSGVGGVAEAAEEHSASPVSPRSRAARAMEPPHAPSASPSENSNRSSGSSTSDSDDSDSGGDSAAELGNWSDLGDANAPEALPHATATATIDGGNGGNGGLAPTAALNIMRDESKAPSAEEAVVDALMAMKQPPLLRRKSVLGAVVDSDGPSREPTPPVARRTRSATQLAGGESTADSRSKGVSPSTAKALPHRKPERAPERAAKVANRGRGGRKGAGGGGVSPSRQPASTLAPDDERAADSDRMHADAHSEAAAGGSGSDFENSTVPFALPQVPSALVSPLKPLSKRAREKMAESREMSPVTGAGDTVQVHDGHSGDDRSPKRRRLSAAGGDQSHSDEALTFALSASSGGALEMLEGIGPRRLWRRGEDESETQFAIRLFSALRHGETDVASTARALSEASNVTPARLHSALAAVWDMCVREWAEDSQRVDTVGVAMGSGAEAALGMLGLRGLELVVALTVLHVLKEKEHIADALFRGMARAIVSRASAGSADESDDLSVIMCRAFGALCSVRRERARAAVLLCDMLRASGRADRPTTQALVDAYPALLRGDECAEFRKLLDLLVAMKGEKSGDAFEAVAAFTTALVVETLQSASLSDDVAGRPDDVSSFRVRTVDIACRACGWAWSFNAIVASLLWPAVAEWQSSLQAHLAGGERGCSTAVVCLTMMGVVGRLCIEEAPRDSRAQIGHLVAALCAILSSSPSDDTGAAAAAFPAEGAVGGSAIDAMDASHVTGAVGGLVEWRGRIAGTLSTTVPPEVAAFVAGARRVSAIASALQ* # ORIGINAL: g10447.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 27664 29843 . - . ID=g10447;Name=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 27664 29843 . - . ID=g10447.t1;Parent=g10447;Name=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 29590 29843 . - . ID=g10447.t1.exon1;Parent=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 29590 29843 . - 0 ID=cds.g10447.t1;Parent=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 28991 29498 . - . ID=g10447.t1.exon2;Parent=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 28991 29498 . - 1 ID=cds.g10447.t1;Parent=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 27664 28704 . - . ID=g10447.t1.exon3;Parent=g10447.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 27664 28704 . - 0 ID=cds.g10447.t1;Parent=g10447.t1 #PROT g10447.t1 g10447 MGDSGARKERAWTQSHSVPGSGFRLNVSMDSQQSDGRLSPRPNTHTSRPLSPRPHSSPHHPHEHTREHKDPRASLTQSELDGLLGDNDASSNSHASFVDGERNLAASNGLIERQLREERAAKEMALTYVKSLEAIIEAYRGGSDYMGGALSAVTAASVSAAAVAAVPGGRQSPASRRDELPCGHQRQCRLRTESLQKRLHESVLREKVLMEKVESLKSELSLADGPHAETEWVRILDVNRTLAVSVDSLKRKLKDEKDKTGKLEERLKKAELALDDGRRDWSVKENKYRRRYEGSPMHMRMLQDVAHLESENDSLSEMLGRAQDALKRSNEELAAAQAELEILRRDGAADALSNTIERAEKERLSLQAQLEDTTRQLCDMTREKKKSVDELVLRREQFRAEMDEIQRHHARELEKAHSEARGVRQQLEQEKYVSARLAAEVQSQDFELASTAESAAAERARGEAAHGTLSSEVQRVRTELQAARKELAAVREELGREAVARKVAEARCESLAVQLSRSQDKFKSLQDVTGLRASSPASVASPVASKDPVRDGVAPQSPVSSRLNGSPRIKPGESSANSSPKRSRLVPAASTSDASAHGDA* # PASA_UPDATE: g10443.t1, single gene model update, valid-1, status:[pasa:asmbl_9087,status:12], valid-1 NODE_72_length_44786_cov_49.6643 . gene 14354 15906 . + . ID=g10443;Name=g10443.t1 NODE_72_length_44786_cov_49.6643 . mRNA 14354 15906 . + . ID=g10443.t1;Parent=g10443;Name=g10443.t1 NODE_72_length_44786_cov_49.6643 . exon 14354 14656 . + . ID=g10443.t1.exon1;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . CDS 14354 14656 . + 0 ID=cds.g10443.t1;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . exon 14796 14839 . + . ID=g10443.t1.exon2;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . CDS 14796 14839 . + 0 ID=cds.g10443.t1;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . exon 15021 15906 . + . ID=g10443.t1.exon3;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . CDS 15021 15480 . + 1 ID=cds.g10443.t1;Parent=g10443.t1 NODE_72_length_44786_cov_49.6643 . three_prime_UTR 15481 15906 . + . ID=g10443.t1.utr3p1;Parent=g10443.t1 #PROT g10443.t1 g10443 MASLNNAEVVADDFIRGSRKYLPTLGRLLLVATFIEDGLRMWFQWNDQAGYFRRQWGAGTVLVTLFLTYNMIAQIGASAMVVARKHVEVAVGILFSVVVLQAIAYSVLWNFNYFLRNLALTGGLILLLAEVRGPGRIVFAGVPVAETQQERQKNVLVLLGRVLCLLMFFTLIHGEMSPLRVVFSVIGSALIVLVFIGYKTKLSALSLVVFLATLNMFLNSWWMMPLWNPQRDFAKYDFFQTLSVVGGLLLLVYLGPGGMSVDERKKRF* # ORIGINAL: g10448.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 30627 32331 . + . ID=g10448;Name=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 30627 32331 . + . ID=g10448.t1;Parent=g10448;Name=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 30627 31040 . + . ID=g10448.t1.exon1;Parent=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 30627 31040 . + 0 ID=cds.g10448.t1;Parent=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 31156 31338 . + . ID=g10448.t1.exon2;Parent=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 31156 31338 . + 0 ID=cds.g10448.t1;Parent=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 31450 32331 . + . ID=g10448.t1.exon3;Parent=g10448.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 31450 32331 . + 0 ID=cds.g10448.t1;Parent=g10448.t1 #PROT g10448.t1 g10448 MTARKSARTGSASAAVSDAPTDKAPSPARPARKRGRSESEGDAHADLPAAKKGARTKHEEKQPSHAPAPALAHDRTDEHARPLHALGEVLVCGMNECGQLGIPGSTSFKRLKTVPGLPKARAIAAGGMHTVAACQDGKVYSWGVNDEGALGRPSDADNEDKPFPIEGLDAHAIVAVVAGDSHSAVLTARGELFAWGTFRDANGVMGFSVDTHIQATPRLVYPVPGHPADPLVKVASGCSHIAGLTASGQVVTWGSCEQGQLGRTGSKVPARRLKETLLVPHPVDLSRCIKRGSSARPSAVACGNYHTLVLYDDKCISFGLNNHGQCGVATKDTIIYAPRTVELSGEKPVGAAGGLHHSLLVAESGKLFSCGNGVYGRLGLGDANDRTEFTHVERLSDSKVVSVSCGVCASYAVSADGKAFSWGMGEGGMLGLGDEDDRETPERIEGRELERPGSKVLFVSAGGQHTIVVVDRPPASEGAASAPQTPVAPAKP* # PASA_UPDATE: g10444.t1, single gene model update, valid-1, status:[pasa:asmbl_9089,status:3], valid-1 NODE_72_length_44786_cov_49.6643 . gene 16327 20075 . - . ID=g10444;Name=g10444.t1 NODE_72_length_44786_cov_49.6643 . mRNA 16327 20075 . - . ID=g10444.t1;Parent=g10444;Name=g10444.t1 NODE_72_length_44786_cov_49.6643 . five_prime_UTR 19967 20075 . - . ID=g10444.t1.utr5p1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 19951 20075 . - . ID=g10444.t1.exon1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 19951 19966 . - 0 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 19722 19822 . - . ID=g10444.t1.exon2;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 19722 19822 . - 2 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 18960 19640 . - . ID=g10444.t1.exon3;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 18960 19640 . - 0 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 18559 18784 . - . ID=g10444.t1.exon4;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 18559 18784 . - 0 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 18258 18377 . - . ID=g10444.t1.exon5;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 18258 18377 . - 2 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 18002 18136 . - . ID=g10444.t1.exon6;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 18002 18136 . - 2 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 17187 17879 . - . ID=g10444.t1.exon7;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . CDS 17227 17879 . - 2 ID=cds.g10444.t1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . exon 16327 16927 . - . ID=g10444.t1.exon8;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . three_prime_UTR 17187 17226 . - . ID=g10444.t1.utr3p1;Parent=g10444.t1 NODE_72_length_44786_cov_49.6643 . three_prime_UTR 16327 16927 . - . ID=g10444.t1.utr3p2;Parent=g10444.t1 #PROT g10444.t1 g10444 MDTLPDRSRPRGHLPPLKAPASANKPPKTETVDGTVSAEFEYKGNKYRNAAVVAQDEPTEKRSTPKGTPRSESAAVALRRRRKSDETATDSPAGSNASDDADSSERKKSRRRKPSKRARKSDDRSHSFARGDRGSRGGSDADVDPSEDAGAKMDVDEAEGRNSRRSRSPQLRQSASRRTASHKKSASRSSRNRSKTASPDFDNDVSMADNPDIPQGASTPADRSLDMDSVTHDEPSDKEDNENDGRVRSESKPLRMFCATWNMHDEKPPSSIAALLRPHEGEQEDCDVYAVGVQEQSWQQRQWEAALHAELGPEYILLHSHAMLAIHLAVFVRKPLLRHISDVESAHVSTGIANVVGNKGGVGIAFTIFGTKLLFINCHLAAHQHKAEERNKDYRRIVREMPLPHKRVVRKALSISGTKDREEDVEGARSKQRDVTTEYDVAFFFGDLNYRINGTRRLVDALVDNAMREVMLSNDQLSHARIRGSSFWGFTEPHIEFPPTFKYDLDKDDYDTSGKVRIPSWTDRILTRDNSVAASASAGPSAAGDTTATAMDSSAGDGRHDGADGNLHDTGHAHHSHHTGLRGHRSLITPGQGRLRPVAYNCCQSFRMSDHRPVYAINELDVSWTKSGPKGSKTTQTSVCAIL* # ORIGINAL: g10440.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 69 2043 . - . ID=g10440;Name=g10440.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 69 2043 . - . ID=g10440.t1;Parent=g10440;Name=g10440.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 69 2043 . - . ID=g10440.t1.exon1;Parent=g10440.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 69 2043 . - 0 ID=cds.g10440.t1;Parent=g10440.t1 #PROT g10440.t1 g10440 MAPPRNSVATVVDEMSSGKGDACDGSLLRRDRNTVVGRLRMELGPMYHLPIVKGLLLMGMERLFLPFPSTRTRGARERAKESVFMRDAGEVTEALSHSPRNGLFSALSILHKIFRVSMMLMTAFGVLASMSNFAYRGWKDRDANVVVMFLVGMVCFADGALSYAVFFFRRPTVHLHQLLVFSGNSSTLARRIAHLRRRSFIFSMAFPLVCVGIGFPAVAHSLAEREGLDLISYFRSFGYMCPINSEALSFLTACSLLLGGYASAFGSEYFLTAYHSSIIVSRRLADLSGKGRQTAHATPDGGGGGVGVDHVWGGNSRATSRQNSSSNLGFQPGRGVGASCSSLHELEASRLYASTVIRKRLAMALQRMLRKLSPITFVFAQFRFVLVVLCVCGLSTHSGTQWVYLSLYCTLLVSFSFALLATYRSELAVRKKKGEVKAGIDAQERIESVREFRTTVSVVDSTHGEGAPPDASAAVPADTHPGGCEPVSKTTSRPFDLFHHVEKPLQSLQPQLKSTEGPLAPQLHNSMWAVLDDGVSEAGDFGSVDTLSFYNVTGPDERGADDIEIVPPNVVELEGDGLEGDSVGELAVAMSGTEMVDDHLHEKKSRAGIRPHLTLTFSQTPDPAMGSTGAHSLGDIIECSPGVGDEEMSAVLNASMKE # PASA_UPDATE: g10446.t1, single gene model update, valid-1, status:[pasa:asmbl_9090,status:12], valid-1 NODE_72_length_44786_cov_49.6643 . gene 25821 27045 . - . ID=g10446;Name=g10446.t1 NODE_72_length_44786_cov_49.6643 . mRNA 25821 27045 . - . ID=g10446.t1;Parent=g10446;Name=g10446.t1 NODE_72_length_44786_cov_49.6643 . exon 26569 27045 . - . ID=g10446.t1.exon1;Parent=g10446.t1 NODE_72_length_44786_cov_49.6643 . CDS 26569 27045 . - 0 ID=cds.g10446.t1;Parent=g10446.t1 NODE_72_length_44786_cov_49.6643 . exon 25821 26446 . - . ID=g10446.t1.exon2;Parent=g10446.t1 NODE_72_length_44786_cov_49.6643 . CDS 26069 26446 . - 0 ID=cds.g10446.t1;Parent=g10446.t1 NODE_72_length_44786_cov_49.6643 . three_prime_UTR 25821 26068 . - . ID=g10446.t1.utr3p1;Parent=g10446.t1 #PROT g10446.t1 g10446 MAASHSALRRQLAPAWIRFIKFHIKLALFAMSVFIATATTAIIGIFRPCNTANNNIAASIFNFLGRLIFRVRVEVRGRENLTKAHPCIYVCNHQSSLDVLCLAAMWPEHTAVLGKKELLYMPIFGQFFYLSGNISIDRVRKENAMAAMETAVRIIKEKKRNVWIFPEGTRNREEGMLPFKKGAFHLAVQAQVPIVPVVFSQYHDFYCKKDWLFDSGRVVITALPPVPTTGLASADVDALIERTRNAMLVAYNDTAAGTITAREASHPRRSADKAKSRGKGKKHR* # ORIGINAL: g10441.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 3564 9315 . + . ID=g10441;Name=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 3564 9315 . + . ID=g10441.t1;Parent=g10441;Name=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 3564 5512 . + . ID=g10441.t1.exon1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 3564 5512 . + 0 ID=cds.g10441.t1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 5743 7873 . + . ID=g10441.t1.exon2;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 5743 7873 . + 1 ID=cds.g10441.t1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 8091 8240 . + . ID=g10441.t1.exon3;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 8091 8240 . + 0 ID=cds.g10441.t1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 8471 8746 . + . ID=g10441.t1.exon4;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 8471 8746 . + 0 ID=cds.g10441.t1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 8917 9007 . + . ID=g10441.t1.exon5;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 8917 9007 . + 0 ID=cds.g10441.t1;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 9179 9315 . + . ID=g10441.t1.exon6;Parent=g10441.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 9179 9315 . + 2 ID=cds.g10441.t1;Parent=g10441.t1 #PROT g10441.t1 g10441 MASTMKRGPEVELVLPAILPSQGLVSGATPSSPGGTALSIPHPRGRGHHGAQTTQNALPNDCIPADILRCLVPRPPGLELNTNGSVRGLKSGKAGKTILAKLPVPLESRLQHAAPPNPAPPADDARATSPSKSHGPPANVWHHPERRKKFKHLYEQAPCVCGAGSDISFLYDATNVGNATATSELPTDAVLPEEYSIAVHEGARQLEFKDDLYTTVLDDHPHHHTAFPSMKPASRHDAIKLKEALGALLRKVGISDTPRSLDNLEDAAAAHTGTQQIDEASTTHIHSLLDLARREQDVYNLVFAELVRQVTVGCVERGEVLADLRKGYNALLNRMPRHVIGLHAELVASRALTRRLTDELMRFRTSMADLTKELAQVRRHDAEVGEQARKAQAKLTAAIADSERNASIVAEYHALYDMQRQRLEATIDKITTEKQSWSNAAHSLASKVSSERGLGDFMHLQQCEKSWSQLARHFAVVLGDVNTKQMQGLRGQIDGWRAEVMAFSARLTGDDESALAKIVAVHNQIRSWVSHLEDGMISGEPIGLNVSSVERLSEDIKYWEEVFGFYVERFSGDSLLSNQEEISRFNKMVDGWTSTASRIFGRQNNESLREDLISLSNEVDESMAKIAGRVTGETSAAKALVNLLNPMETWANRLSTLVYGEQSLSVTDRVKLHTFLADWAGQVAQVIDRLQSGNIAIKSDFRRLLDAVEGWLENTMGKIDSEDELFVEQVSGLHVGMISWMVDLLMLATGCGEKGSHEMSTVYQYLCQQLDSFTKRLAGGCAGIESPLAEGADARDAVADDDRVAQDLLILRSECDDWIKMAGALMNDELSATGPKRQDSIGAHISSIARVAGSRKGSMAVPRSSSVVSNDPAMKTMDDALAQATGQIDNISEGFESDLCEHGALIAALRSEVQGLSDKLRAAEERSRMSEDRATRLTAELESAIRDGDREEGPPLFGRTAGTGASGDSLEDVRGQGGKEADEQMVARLVVLEERLRTVEGRPTKPIPAAKVSIDRRSQMLEDRIKALSAQPFITDDMLTLQNTLNTSSRLWGFVRHAFRPNRSGRPIETVVLEIRELYDAKLRSDALDDADNYEREPFPEFIRAHFQARYGAGRMADQRIIDLVTASQRFRADCPEIDLFARFAEESFPLDRLSLVLFARACAHRLAEGTKVPRESLSSLPEFVDLARAEAVARKCFAALSREVSEQLLHALYARSVPMSDLAHLPHVTEKSPEAVDPVVGALPKHRRLSLTDLHLLLLEEYETAQREYTGTVVALTSAADHDADGRLTRREFAHVMLYLQPRMSTRSMLRLYRSQAAAGGDPTIEVARVQSIAMALHNEGLQFALRLLPPLLNAPDHDLEAMRQSVRQRWERMHDKVSLLSAKLSASPLHGDRAVSSLIKRDADLLDTDLMSGDPRIAYVRYRDILGHIMRHRNAMVCWEVVAGNEASSAAIGHSAVEDECNALEPIVESHTTSYAPPREDDADPQVDEAELDEADGELLDPVVVDALSPQGVSLGVLNDLLHEIGLIKPDDSVGPPVAPLTVPAIEEHDDTTTVDDFASSTDDQHMADNYASAL* # ORIGINAL: g10449.t1 original gene structure, not modified by PASA NODE_72_length_44786_cov_49.6643 AUGUSTUS gene 33324 36598 . + . ID=g10449;Name=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS mRNA 33324 36598 . + . ID=g10449.t1;Parent=g10449;Name=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 33324 33527 . + . ID=g10449.t1.exon1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 33324 33527 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 33695 34780 . + . ID=g10449.t1.exon2;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 33695 34780 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 34896 35032 . + . ID=g10449.t1.exon3;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 34896 35032 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 35185 35317 . + . ID=g10449.t1.exon4;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 35185 35317 . + 1 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 35434 35613 . + . ID=g10449.t1.exon5;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 35434 35613 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 35736 35828 . + . ID=g10449.t1.exon6;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 35736 35828 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 36067 36135 . + . ID=g10449.t1.exon7;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 36067 36135 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS exon 36314 36598 . + . ID=g10449.t1.exon8;Parent=g10449.t1 NODE_72_length_44786_cov_49.6643 AUGUSTUS CDS 36314 36598 . + 0 ID=cds.g10449.t1;Parent=g10449.t1 #PROT g10449.t1 g10449 MAATARSTAPAASVASALAGPSHSPSPQPGGADGPGGDASLLGGHQAQNNPLARKLNKILNTRLEHDKDVLEALRGLSSFFTENTLKARRNLRGDIERRSLAINREFLDAFRLLNEELDTVHSHVSAMGECCREMASRLSVAREQTVDLIQQTNNMTAETKRIHIRTQVINAFLARFQLTPAEAQVIHGGDDIGREFFDALRRVRQIHADCKLLLRTNHQRAGLELMERMAMHLEAAYERLYRWAQRECRALGRDAPDVPPVLRNALAALSDRPVLYKYCLDELAQTRRIAVQRCFLDALARGGPGGLPRPIELHSHDPPRYVGDMLAWLHQAAASERELLEGLLGATTQAAAGQRSRAMSRQVSGSAVQGPAGALPSAGPEQGGEASPQQPQQPSNRASSASVSIIADDETSVPVMLDKIMEGGCRPFKMRVEQVINAETEIVVCCRVASLLHFYGDTIGVLTGPKSPLVATIEETKTLALKIFFDSLNLQTSRHVINMEAPSQDLLPQDSFKAVLALLRDVLACQDASLVPAEAARKQFVGILSATVDPLLQAVQLAASQLPRASAAVLTVNCMYALQTTLALYDFTAERVERLEEQIESMVDTLVHEQAAMILSKSGLSAKLQSLQSRDPTVPLSSVVGMDGASLRSAMAAFGAVVSSPDPPRLPQCDRLTSARLRTRIPKEAAGLVVAAYASLHAAISDPSNGYGDPQSIVFRPPEQVRLLIGS* # PASA_UPDATE: g10442.t1, single gene model update, valid-1, status:[pasa:asmbl_9088,status:12], valid-1 NODE_72_length_44786_cov_49.6643 . gene 9664 13716 . - . ID=g10442;Name=g10442.t1 NODE_72_length_44786_cov_49.6643 . mRNA 9664 13716 . - . ID=g10442.t1;Parent=g10442;Name=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 12839 13716 . - . ID=g10442.t1.exon1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 12839 13716 . - 0 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 12523 12622 . - . ID=g10442.t1.exon2;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 12523 12622 . - 1 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 11992 12161 . - . ID=g10442.t1.exon3;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 11992 12161 . - 0 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 11541 11604 . - . ID=g10442.t1.exon4;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 11541 11604 . - 1 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 11382 11436 . - . ID=g10442.t1.exon5;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 11382 11436 . - 0 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 10740 10919 . - . ID=g10442.t1.exon6;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 10740 10919 . - 2 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 10564 10617 . - . ID=g10442.t1.exon7;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 10564 10617 . - 2 ID=cds.g10442.t1;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . exon 9664 10370 . - . ID=g10442.t1.exon8;Parent=g10442.t1 NODE_72_length_44786_cov_49.6643 . CDS 9664 10370 . - 2 ID=cds.g10442.t1;Parent=g10442.t1 #PROT g10442.t1 g10442 MFGAPQPTQGAAFGGLSLGGAGGAAPAGGGGMFGTGAPAAGAGGLFGGGGATPAPGSATTTLFGGGAAAPAAGGGLFGAAGGAAAGGGMFGAKPAVTATGTPGTAGPGSGGLFGGGIGGAAGGAAAPGLFSATTTATSTPTAGTLGAGGLGATGAAPAAGGLFGTAGAASGGLFKSTTPTTGAGAGGATGLLGATTAGAAPAAGGLFGTAGAATGTAPSAAGGLGSGFGGAMFGAAGAAKPGSTLGGGLFGAAPAQAQQGVGLQGAAGTAVITKATKYGDMPEGVRSKLDEIEQRIKTEDDYSKRIQQRLNERSLSGTSDVVPHTQRVAVLAANIERESSGAESLKRTLAQDLRHAEVASVMWAQLSDPKAIGGSVDQSVINAFFERVLASFEQRMYLYRQHMEDLESHLILAEERHRFSPEGLEDIIRSQHDGFMALASNLATLHETVAQLRSQYLAYRAKYMSDSTDPFAERTRKAAEIQAAKRRRPMPPTPVVNAPAAVQTQAPGGFGMGTSAFGSTGMGNSAFGSTGLGGPAFGSTGMGGPAFGSTGMGGSAFGTTGLGTTGFGGSSTMGGSTLGGMGTAGFGGAQSQSGAFGGLSTAGSRLGSAAGGGGMFGAAGGGGTMGMGMMGATGLGSGGGSSSARGFGGPSSMGFGAGGTTSATAPSLQLTSATPTTPFGASSGGAFGSAFGAPPPSAGAMTPPAGASPWGAGGVTPVAPPPAGKKQPGAAPKKK* # PASA_UPDATE: g10450.t1, single gene model update, valid-1, status:[pasa:asmbl_9086,status:12], valid-1 NODE_72_length_44786_cov_49.6643 . gene 36834 44786 . - . ID=g10450;Name=g10450.t1 NODE_72_length_44786_cov_49.6643 . mRNA 36834 44786 . - . ID=g10450.t1;Parent=g10450;Name=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 43151 44786 . - . ID=g10450.t1.exon1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 43151 44786 . - 0 ID=cds.g10450.t1;Parent=g10450.t1;5_prime_partial=true NODE_72_length_44786_cov_49.6643 . exon 42598 42749 . - . ID=g10450.t1.exon2;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 42598 42749 . - 2 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 42393 42499 . - . ID=g10450.t1.exon3;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 42393 42499 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 41569 42241 . - . ID=g10450.t1.exon4;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 41569 42241 . - 1 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 41149 41344 . - . ID=g10450.t1.exon5;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 41149 41344 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 40875 41035 . - . ID=g10450.t1.exon6;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 40875 41035 . - 2 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 40720 40764 . - . ID=g10450.t1.exon7;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 40720 40764 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 40431 40570 . - . ID=g10450.t1.exon8;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 40431 40570 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 40143 40235 . - . ID=g10450.t1.exon9;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 40143 40235 . - 1 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 39783 39900 . - . ID=g10450.t1.exon10;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 39783 39900 . - 1 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 39343 39463 . - . ID=g10450.t1.exon11;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 39343 39463 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 38847 38973 . - . ID=g10450.t1.exon12;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 38847 38973 . - 2 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 38527 38671 . - . ID=g10450.t1.exon13;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 38527 38671 . - 1 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 38111 38323 . - . ID=g10450.t1.exon14;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 38111 38323 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 37659 37868 . - . ID=g10450.t1.exon15;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 37659 37868 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 37385 37490 . - . ID=g10450.t1.exon16;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 37385 37490 . - 0 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 37052 37201 . - . ID=g10450.t1.exon17;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 37052 37201 . - 2 ID=cds.g10450.t1;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . exon 36834 36910 . - . ID=g10450.t1.exon18;Parent=g10450.t1 NODE_72_length_44786_cov_49.6643 . CDS 36834 36910 . - 2 ID=cds.g10450.t1;Parent=g10450.t1 #PROT g10450.t1 g10450 SSCPNKVLVDGDVTAAFEIRTGLKQGDVLSPLLFNLFINELVAEIKNVNNGILVTEPTANQAQDLRVSSLLFADDLVILAKSVEDLNKSLEALSRFCAKWRLAVNVGKTKAMRVTGPLIEDGAVRYRGEALEVVDVYRYLGIELDRGLTFENAIKAALEVGKAKTMRLGAVLANRNLSMRTRQLVWQTIVRSAMEYGIAHFTPKAREMAKLERVQCGALKTIAGCNSRTATSGVMYEFAALTMADRMHMAQLRLSRKIVGMEKSRITHRACTTYLRRRPTARLSAVNTESSAFKAAAGAVDAALTPEVRLRSAAAQKRAAKQALVSRRSVLAKKAVVEQAALRSLGVDVDREEWGPRPYLLQAPATAATTAFKLRVASLPVHHLLAKGNRRDPTCLLCGAADETIRHFLLECPPLQQERAALRTSVEQCKLSRAEVLDSGPMMSHFFAANLLKAVAHGEAQGSTPSPTRPLQAMWRARARALEVRRLANEDEPDSDGDGEGVATPAAPGQVSAARSSSITPPLFDSPPSSPRVVRAAVLARRPGSGPSADLLLSFALAERVLVARLQMLPVLRPSCFAYLVGCYNRTLDASRGLRKNVADVLGPGLQAVRGLIVSYAGLVLAAPSMFPFHPSPAASPLLAGMLAGSEDPDAVRGDFVDALAARVDGDHLGAVFNPVLSGLSQEMSQHYFGADCLSLLRWLADLCASKQLCAAVVAHPQWLPSELMVTGRECELASLLGPFFSPSVCPEDAPAVAEQMFSSPTKRTQAGVDATHVSIRNVLGAIQKIQFDIVKALLKAGAAERSEVLRLVAHIVSSNRKRAQMRANFLIAATDGFLLNWCAVLLNLCDPFVDAKGTQMSKIDACYLLHPQSRLNVTDETKLAATSEDVGRWVDERNHARTQSFLARQPQTKIQEAPVAASSAGAPNFITECFFSTMSMLHIGYVRTCVRYLALNKELRTAQTSIRELEERKPNWIMTAESAENEANLEKLKRQFELLVRNRFAYDAQLLDPALVGHVLQFYSFAALWLTRLVDPQSHGLPLPNEVPMAFASLPEYYVEDIADFLLFLTRNAVEVLDQSPLDDILAFIVIFISSPVYIKNPYLRAKLVEIVFMLSPEIQGQNMQRFAYLLERHPMAVTHLAPALMRFYVDVENTGSHTQFYDKFNIRYNISIIFKSIWKSESHRRVMIAESRNGEYFVRFANMLMNDMTFLLDESLSKLAEIHEIQTQMANAAVWAALPQQTREEKEKTLQSDEQQCQSYLMLANETVEMFHYLTQAIVEPFLARELMDRLAAMLNHNLMQLAGPKCRDLKVTNPEKYRFEPKTLLSKLAAICLQLARMTPDARGSPTEFVVAVANDGRSYRKDVFDKVIDVLRKFGLRGEPFLKRLDDFVAAVEAAKVATAQEDEELGDVPDDFLDPLMFTLMTDPVKLKTSGVTCDRSTITSHLLNDSTDPFNRQHLTPEMIEPNTELKAQIDAWVSEKRAANQSRKAQ* # ORIGINAL: g9019.t1 original gene structure, not modified by PASA NODE_4140_length_2131_cov_101.705 AUGUSTUS gene 1517 2010 . - . ID=g9019;Name=g9019.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS mRNA 1517 2010 . - . ID=g9019.t1;Parent=g9019;Name=g9019.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS exon 1948 2010 . - . ID=g9019.t1.exon1;Parent=g9019.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS CDS 1948 2010 . - 2 ID=cds.g9019.t1;Parent=g9019.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS exon 1517 1797 . - . ID=g9019.t1.exon2;Parent=g9019.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS CDS 1517 1797 . - 2 ID=cds.g9019.t1;Parent=g9019.t1 #PROT g9019.t1 g9019 FKRRRDGSPSANELPAKKQKSIGPQFQADVSAALSRLAATNIAVDDLFNPVMVSKIAVPSPYSVPERFASGDYFEFMGRERLQPLLDLMRTLLSGSRIPCRYRGVAPQAQPRS* # ORIGINAL: g9018.t1 original gene structure, not modified by PASA NODE_4140_length_2131_cov_101.705 AUGUSTUS gene 837 1481 . - . ID=g9018;Name=g9018.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS mRNA 837 1481 . - . ID=g9018.t1;Parent=g9018;Name=g9018.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS exon 837 1481 . - . ID=g9018.t1.exon1;Parent=g9018.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS CDS 837 1481 . - 0 ID=cds.g9018.t1;Parent=g9018.t1 #PROT g9018.t1 g9018 MLAAAVALLLKEGQRVVFVPNAGDIVDDPTVCLRASFAMAFPELIDDIALCDRVEDLANLVGGKNLNFLLVVDQLNALEVNAGLGSEADRAMRDIRSIRCSSPYVRGVSANNVNATTFAQKQRDERDFYCFGGLSDVEFSAWWARHFSSDGSDVDDLPDRLRTFAREDLGGVPLLLADLLGRVGSPLRPTQDTLNSCLSYGGALALSTASDLKG* # ORIGINAL: g9017.t1 original gene structure, not modified by PASA NODE_4140_length_2131_cov_101.705 AUGUSTUS gene 51 791 . - . ID=g9017;Name=g9017.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS mRNA 51 791 . - . ID=g9017.t1;Parent=g9017;Name=g9017.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS exon 51 791 . - . ID=g9017.t1.exon1;Parent=g9017.t1 NODE_4140_length_2131_cov_101.705 AUGUSTUS CDS 51 791 . - 0 ID=cds.g9017.t1;Parent=g9017.t1 #PROT g9017.t1 g9017 MAMQILAGARAEVGAHATAYDHRYFFAGPPESLQPVLRAVSGIALAALVEVIRSIGMHDKFLDPSFLSACKDARNPVVKGFLVEHAVLSAIRANGLKLPDGTKFSGPLDVVQYRDVESVAIVASPSVLYVPTAFNEKDVDVVLRCVGKKGRVTIVALQITIGTISRHAHSVRFFTNGQDARWVQGVVADAVQRSFVWVVPSAEARAFRDKHVPGNRQPGRSGQTTKSQFEQQSLAIRDLCPLLTTL* # PASA_UPDATE: g12683.t1, single gene model update, valid-1, status:[pasa:asmbl_8008,status:12], valid-1 NODE_5335_length_902_cov_36.2201 . gene 39 838 . + . ID=g12683;Name=g12683.t1 NODE_5335_length_902_cov_36.2201 . mRNA 39 838 . + . ID=g12683.t1;Parent=g12683;Name=g12683.t1 NODE_5335_length_902_cov_36.2201 . exon 39 171 . + . ID=g12683.t1.exon1;Parent=g12683.t1 NODE_5335_length_902_cov_36.2201 . CDS 39 171 . + 0 ID=cds.g12683.t1;Parent=g12683.t1 NODE_5335_length_902_cov_36.2201 . exon 652 838 . + . ID=g12683.t1.exon2;Parent=g12683.t1 NODE_5335_length_902_cov_36.2201 . CDS 652 838 . + 2 ID=cds.g12683.t1;Parent=g12683.t1;3_prime_partial=true #PROT g12683.t1 g12683 MQNPLVSRVIATLDVDGGGDVDFQEFISCLSIFSVKGEKEAKLRFAFQIYDVDRDGFISNGELYHVLKMMVGTNLKEQQLQQIVDKTILYADKDGDGKISFQEFCD # ORIGINAL: g11535.t1 original gene structure, not modified by PASA NODE_2856_length_4936_cov_52.9241 AUGUSTUS gene 180 3405 . + . ID=g11535;Name=g11535.t1 NODE_2856_length_4936_cov_52.9241 AUGUSTUS mRNA 180 3405 . + . ID=g11535.t1;Parent=g11535;Name=g11535.t1 NODE_2856_length_4936_cov_52.9241 AUGUSTUS exon 180 2792 . + . ID=g11535.t1.exon1;Parent=g11535.t1 NODE_2856_length_4936_cov_52.9241 AUGUSTUS CDS 180 2792 . + 0 ID=cds.g11535.t1;Parent=g11535.t1 NODE_2856_length_4936_cov_52.9241 AUGUSTUS exon 3025 3405 . + . ID=g11535.t1.exon2;Parent=g11535.t1 NODE_2856_length_4936_cov_52.9241 AUGUSTUS CDS 3025 3405 . + 0 ID=cds.g11535.t1;Parent=g11535.t1 #PROT g11535.t1 g11535 RLAVVALAKLQLTTEALFAHGGHGVSAGASPSAVTCENALDVLVRSQAFASGTNAGAWKGTVDAATDVTDDGGPASHDSAAALWVVASNLSLVLALAEKESPRKATAVDVVAKRFITAIVDGKHSTTALTGGSNITSVGVTCRDMAIAALLRADALESRRLQRSLVGHVWSRVAEATAVSAVTAEDEAGCIRELSALAGSIDWSTPPATGSLESLASLVGVLALAPVTHLPAWERSTCVAVSLLSMRAALAGLTRAGAAKEAEKTAPATKKKQQQSASAVGAANYAAFSHAELVVRGEAVRRALRIITRVGVTHPAMIHSAIRSTAVAALLRGVEGLGRALDDGGARSVGGDERKSLRTSLLRRLGKLVGGMCRDAIVARVGEAALQGHSGISVEEHAYNAGEAPLHALGELLAMDGGDDTAAEIVAVVLGAIGQALAFVSSHTGGKRAAVPVSKAAADSVATARALLGMCARIVAGGVGVSGIVFALPQRHALVRCMAELLKSQMRFLTHARGVAAGADAAADGTVMASLSQDVLRECSRYLRTGLTPQGESACAHREAISAAVAYLDAACHALPSDTLLASAHAGECLAADVYNLVRVGLLHLHSHPWLLHDALNLFASYVSHSTSEQLARVAEAVRVELEKASGVITPTQRSARSGQHGADAHHGPHGDDSIEYMSSMYSAAAALRCATVLLTLPLPENRRQLIKRHIMPLCAVIPSVVSSFKPSNDERGIQALALVTCPALEAVEAAATFEGMDLRSSDVTVAMEALVASPLFGAASASVAAMASGAEGDPSALQWLRAVASDRRAGDVQEDEEDAATARRDECVVGDGDAIEAFVFRCYRVLRALLRRHSDPVYAQIHVFAAAVRHLLAFIFQRFGASDDDDVDASPSGGVLPGGARCVENLSRLLQELSSHKAASSKYAPYLVADYLEWTQRRPLPPALRQGMQSGVYALLDMCTEHEDALLMATADPPSRALLQSLHADFTKYHKYTGKV* # PASA_UPDATE: g11536.t1, single gene model update, valid-1, status:[pasa:asmbl_5127,status:12], valid-1 NODE_2856_length_4936_cov_52.9241 . gene 3667 4936 . - . ID=g11536;Name=g11536.t1 NODE_2856_length_4936_cov_52.9241 . mRNA 3667 4936 . - . ID=g11536.t1;Parent=g11536;Name=g11536.t1 NODE_2856_length_4936_cov_52.9241 . exon 3667 4936 . - . ID=g11536.t1.exon1;Parent=g11536.t1 NODE_2856_length_4936_cov_52.9241 . CDS 3752 4936 . - 0 ID=cds.g11536.t1;Parent=g11536.t1;5_prime_partial=true NODE_2856_length_4936_cov_52.9241 . three_prime_UTR 3667 3751 . - . ID=g11536.t1.utr3p1;Parent=g11536.t1 #PROT g11536.t1 g11536 ITIDIALWKFETGKFYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVGINKMDSIKFSEARYNEIVNEVSNYIKKIGYDPKAVAFVPISGWHGDNMLEPSDNMPWFKGWSVERKDGNAAGKTLIEALDAILPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPANVTTEVKSVEMHHESLPEANPGDNVGFNIKNVSVKEIRRGMVAGDSKNDPPKEAKQFTAQVIILNHPGQISNGYCPVLDCHTAHIACKFAEIKEKCDRRSGKKLEDAPKFVKSGDAAIIDLVPTKPMCVEAFTNYPPLGRFAVRDMRQTVAVGVIKDVDKTEKVATKGAAGAKAAAPKAAGKK* # ORIGINAL: g6923.t1 original gene structure, not modified by PASA NODE_1492_length_10959_cov_57.9094 AUGUSTUS gene 9054 10842 . - . ID=g6923;Name=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS mRNA 9054 10842 . - . ID=g6923.t1;Parent=g6923;Name=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 10654 10842 . - . ID=g6923.t1.exon1;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 10654 10842 . - 0 ID=cds.g6923.t1;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 10429 10541 . - . ID=g6923.t1.exon2;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 10429 10541 . - 0 ID=cds.g6923.t1;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 9763 10317 . - . ID=g6923.t1.exon3;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 9763 10317 . - 1 ID=cds.g6923.t1;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 9054 9486 . - . ID=g6923.t1.exon4;Parent=g6923.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 9054 9486 . - 1 ID=cds.g6923.t1;Parent=g6923.t1 #PROT g6923.t1 g6923 MEARRTAMHAEGLQNFRNWLAISPEKGMVHVEGDEIHLGYGLPDDTLLGLSLEAFRVAADIRLREDGAWTLLEYGPAVGDGEFLNALAQYLTELYGSPVEKSHLMVTAGATSGLAFITQHFGRTGVTVYVEDPTFFVALCSLREWGLRVVAIPTDSNGMRVDILEEMLLKDATDANLPHCEHGYKALVYTIPTFQNPSGTVMADDRRRRLVEIAKTHSLLVISDDVYDCLTYAEGGRASLPPRLSHYDTDGKNVISNGSFSKLFGPGLRLGWIECGRAVLDELKASASLNSSGSMNHVTSGIMHAAMESGLAYEVVKLHRSAYSSRRDALAHVLRTELPPGVTFEEPQGGMFLWVFLPEGADAEVLLKVCIERHHVKFQPGRAFSPSGGCRRCVRLSFAPYTKAVIVEGGRRFCMGVRDYLAAITGKAT* # PASA_UPDATE: g6921.t1, single gene model update, valid-1, status:[pasa:asmbl_1760,status:3], valid-1 NODE_1492_length_10959_cov_57.9094 . gene 3658 6797 . - . ID=g6921;Name=g6921.t1 NODE_1492_length_10959_cov_57.9094 . mRNA 3658 6797 . - . ID=g6921.t1;Parent=g6921;Name=g6921.t1 NODE_1492_length_10959_cov_57.9094 . five_prime_UTR 6600 6797 . - . ID=g6921.t1.utr5p1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . five_prime_UTR 6392 6399 . - . ID=g6921.t1.utr5p2;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 6600 6797 . - . ID=g6921.t1.exon1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 6250 6399 . - . ID=g6921.t1.exon2;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . CDS 6250 6391 . - 0 ID=cds.g6921.t1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 5979 6038 . - . ID=g6921.t1.exon3;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . CDS 5979 6038 . - 2 ID=cds.g6921.t1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 5703 5806 . - . ID=g6921.t1.exon4;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . CDS 5703 5806 . - 2 ID=cds.g6921.t1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 4390 5586 . - . ID=g6921.t1.exon5;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . CDS 4390 5586 . - 0 ID=cds.g6921.t1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . exon 3658 4246 . - . ID=g6921.t1.exon6;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . CDS 3989 4246 . - 0 ID=cds.g6921.t1;Parent=g6921.t1 NODE_1492_length_10959_cov_57.9094 . three_prime_UTR 3658 3988 . - . ID=g6921.t1.utr3p1;Parent=g6921.t1 #PROT g6921.t1 g6921 MKKATPSRASPPSTPLPQEADVPDRGVVYTFGKTRFNNNIAGRFWMKDDEVVFAACGETHSAVVTAKGRLYTFGANEWGQLGLGHKKTVVKPTVVKALKHEKVIHVACGRHHTLVATDSGKLYTFGAGGDHQLGHGDEEDQVLPKEIESLEAQAYSMVSCGAYHCAALTEEGVVLVWGTGSEGQLGTGTEECKRPTEIDGFAKGAWISCGYYHTALVNNKGQLFTFGEGDQGKLGHGDMNECPRPKRVEGIKTKVVAVSCGGTHTAALTDKGVLYTFGSGQFGQIGQHSGVVELAEPRIVPALDGKKVKMVSCGSEHTGVVLESGEILTFGEGRHGKLGHGDENFSNVSVPKRIESLSKVLSVGVACGGCQTLVLGWKKTAKGNDRRTSSPVKRSFSSEHVPSDRRGLGDRGMDSDFERGTGRKLAPLPPLKGGRLDAIAVKGRKIDNDRSDHFKPGELKAATSKQKKKKGSDTSDFSDSDSEVDLRKKVPKTPASSDEDGPKHKKKGAHSDSETEGDSGSDSEDDHRGKKAGTSQKGKRKGSDEGSDDDKGKGKKGKEDAKKGKGKDAKDKDGKEKKKSSMCTVL* # ORIGINAL: g6920.t1 original gene structure, not modified by PASA NODE_1492_length_10959_cov_57.9094 AUGUSTUS gene 367 3379 . + . ID=g6920;Name=g6920.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS mRNA 367 3379 . + . ID=g6920.t1;Parent=g6920;Name=g6920.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 367 2106 . + . ID=g6920.t1.exon1;Parent=g6920.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 367 2106 . + 0 ID=cds.g6920.t1;Parent=g6920.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS exon 2348 3379 . + . ID=g6920.t1.exon2;Parent=g6920.t1 NODE_1492_length_10959_cov_57.9094 AUGUSTUS CDS 2348 3379 . + 0 ID=cds.g6920.t1;Parent=g6920.t1 #PROT g6920.t1 g6920 ALAERIRDLARHLKCLYLLRETTTAPDAPSHVVKCIVYSRNELVVDYTQVLDRVHPDNPCVFAGVFGTFSRRLVAVKVARIPPTREDKDESYRECMREIKLLSGIFASGGAHPNIVNYLHSERIKDAGTLLVVMERCAFDLADTSALGALLVTWQSHEGGAFPRDSITWFFRGLADGLAFLHSAKALNLGHPDTPPGIIHGNICPPNVYVSMGLQGKIGDLGIGGALSGRDAAAEKDDEKVLHTARPTRVSARVRPYLPEGEASSKSADVYSLAHVFFHAVSGGRFLDVANLFACSAFKTVGSRVGDVLHSGQHTEHGNENQRVKSRIEPEENGAPRLSPAAYGDRRGLLIALPTEQPRFAPQQPQDPHLQPPKQQGYPQQQRRSSSPSPIQRSPSAVDLESELRDMGTAAIRTEVAALPASRNRTFLGSPLSTELEDLLCCMMTSDSPTMTARAGCVRRYSAEDCLAHPLFWNRAQRIEFLAELNEFIIQSEKSGRAATSSTFESFRSSLEADFAVEFYRSHPSSQCWLDVVSVPPSKGHWSRESKFYTYRPSAKDAIRFSRNMIIHHNDEQGHGTKEEVVEFFLERHLPFLIVVGYRAIRAHFRTKPAFFRFFWVTAPQRTERDNLIERLAAAEDRIHSLEMQLRLAAQQGFVAPDAQHGDVEYVTDDDVGSVVSYQGDGTVPGNDKGGPSGTASSDVASASISVSASSHLGLPSSASTDKCSTWVANATGEGRRQASTQHEYPLDNEQLQQQPHDRQQHQQQQVQQQVQQQSVQQQQVQQQRQQPRYPRRRRDHEQGDPDPAAFESTGARQYSPESPATTRRQGQSGGRQWGLSPRGQRYPDGNSYGRSYNPVYGSPNYGGASGRVYSDNGRGYATPASPLMDVAREPRAYDERPRRQHSGWGRGGGGGGRRGGGYDEYY* # PASA_UPDATE: g6922.t1, single gene model update, valid-1, status:[pasa:asmbl_1761,status:12], valid-1 NODE_1492_length_10959_cov_57.9094 . gene 7240 8784 . + . ID=g6922;Name=g6922.t1 NODE_1492_length_10959_cov_57.9094 . mRNA 7240 8784 . + . ID=g6922.t1;Parent=g6922;Name=g6922.t1 NODE_1492_length_10959_cov_57.9094 . five_prime_UTR 7240 7284 . + . ID=g6922.t1.utr5p1;Parent=g6922.t1 NODE_1492_length_10959_cov_57.9094 . exon 7240 7640 . + . ID=g6922.t1.exon1;Parent=g6922.t1 NODE_1492_length_10959_cov_57.9094 . CDS 7285 7640 . + 0 ID=cds.g6922.t1;Parent=g6922.t1 NODE_1492_length_10959_cov_57.9094 . exon 7763 8784 . + . ID=g6922.t1.exon2;Parent=g6922.t1 NODE_1492_length_10959_cov_57.9094 . CDS 7763 8729 . + 1 ID=cds.g6922.t1;Parent=g6922.t1 NODE_1492_length_10959_cov_57.9094 . three_prime_UTR 8730 8784 . + . ID=g6922.t1.utr3p1;Parent=g6922.t1 #PROT g6922.t1 g6922 MSEQESRHGLGSGASVSPADSARRRPDSEASRRADDLASYFIRTLSADVTSGRGVTSPSTEVAASDPPVTFNVGGRLFTTRRSTVMSRHSALAVLLREDNDRRGPQGRTDANGVYFFDRSPVYFEMLLNCLRTEKIIPPENRSDQLQLLLEAEYFAMDAVASSLRLSLGVDESFSLSDSQMYEYPVEADPMSSQEGPLQGIVTDGLVACLDANDPRTLTHGGHRWHDSSGQGNDAHFPPTAPLYIPNHTCAAFRFSSDVHRTLAPLDITPSATPACTIEAWVKLRAITTGLGCLVTNGTSQHCRAIHLHDRSAGQTNGLGSVCVVSGEHRLIAGGPPPLGRWLHIVAVWFPDGSVKAYRDGRIAGSIPALAHAAVSCDSDGDDEYEEGSRIIAIGAHHLLGNSHIDGSIAVIRVYARALAEYEITDNYYSHARRFSHGLS* # ORIGINAL: g6534.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 5147 8361 . + . ID=g6534;Name=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 5147 8361 . + . ID=g6534.t1;Parent=g6534;Name=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 5147 5622 . + . ID=g6534.t1.exon1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 5147 5622 . + 0 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 5729 5766 . + . ID=g6534.t1.exon2;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 5729 5766 . + 1 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 5928 6050 . + . ID=g6534.t1.exon3;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 5928 6050 . + 2 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 6173 6561 . + . ID=g6534.t1.exon4;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 6173 6561 . + 2 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 7046 7211 . + . ID=g6534.t1.exon5;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 7046 7211 . + 0 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 7350 7432 . + . ID=g6534.t1.exon6;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 7350 7432 . + 2 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 7532 7764 . + . ID=g6534.t1.exon7;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 7532 7764 . + 0 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 7883 7951 . + . ID=g6534.t1.exon8;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 7883 7951 . + 1 ID=cds.g6534.t1;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 8154 8361 . + . ID=g6534.t1.exon9;Parent=g6534.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 8154 8361 . + 1 ID=cds.g6534.t1;Parent=g6534.t1 #PROT g6534.t1 g6534 MASQEPPRRPLGEVDPNINVLSPARHLMSVSKIDHPDTCIAAPALNGQPIVGSMVVKSEQVHPQPMQVDQPSHTADADNGVRYPLLATLVKPKVLDTAAPAAPADDVSRVAVPETDLSTNTPVIIPEKALVTASDEQDELYAMNLAEHLKQESLKVAHITDVERPTTPPMKVDPAEYAKLVDGLDADGSPADEEENEEVIEAPIYSSYRPQKFKLGGEHPSKLVEASSLSSVSLPEVRYQLALPQKAIDTLLSSPQLEAIVYACQRHEFFLPDGSRAGYFIGDGAGVGKGRTIAGLVRERFLRGDKKAIWFSVAKDLHYDACRDLNHVEFEHSKDRIRTLSEAKNLMPSKGKPSKTAESVIELQRQLPKARVVYCSATGASEASHMAYMDRCGLWGPGTPFEEGFSDFLVAVKRRGVGAMECVAMDMKALGGYIARTLSYEGASFDVCETKVDDAFTRAYDDSVAVWNEAREVLSSWQSTFNGKHDRLIQIRLYWAAHQRFFRYFCIGSKLPKVIELAKAALDAGKCVVIGLQGTGEARINDKLDTTSDDSLDDFVSAPREVLDKLLMTCLSRLTGVSPEDLRKGRKTIIEGKV* # ORIGINAL: g6530.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 67 180 . - . ID=g6530;Name=g6530.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 67 180 . - . ID=g6530.t1;Parent=g6530;Name=g6530.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 67 180 . - . ID=g6530.t1.exon1;Parent=g6530.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 67 180 . - 0 ID=cds.g6530.t1;Parent=g6530.t1 #PROT g6530.t1 g6530 MAGREVTLVSLEETYQSRLQQHIDSLLNNFESLVNAAK # ORIGINAL: g6535.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 8516 12266 . + . ID=g6535;Name=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 8516 12266 . + . ID=g6535.t1;Parent=g6535;Name=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 8516 9022 . + . ID=g6535.t1.exon1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 8516 9022 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 9173 9295 . + . ID=g6535.t1.exon2;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 9173 9295 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 9715 9850 . + . ID=g6535.t1.exon3;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 9715 9850 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 9989 10176 . + . ID=g6535.t1.exon4;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 9989 10176 . + 2 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 10303 10431 . + . ID=g6535.t1.exon5;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 10303 10431 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 10558 10617 . + . ID=g6535.t1.exon6;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 10558 10617 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 10761 10946 . + . ID=g6535.t1.exon7;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 10761 10946 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 11074 11641 . + . ID=g6535.t1.exon8;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 11074 11641 . + 0 ID=cds.g6535.t1;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 11824 12266 . + . ID=g6535.t1.exon9;Parent=g6535.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 11824 12266 . + 2 ID=cds.g6535.t1;Parent=g6535.t1 #PROT g6535.t1 g6535 MRGSPDSAPTKRAFEVDEASSDERDYEDDFDMRATKKMRVTDSGASKRTAKASHGNSDYGKGRKSKEMPVNRSSGQRRSSRLNPAANVKGKGKSVYVEPTSSSSSSAEWDGSVTELSDVATTEEDEEDQGDDSDGKDEGESKDADEGEDMCRESLKATERASRSHNKEKVDASSGLSPSILACLEKIDQFMEIFDSVDMPRNPLDVLIDALVAIISEAASAGISLHADKSVNNKRTRYHMTLELPWSAEQCIQQLGRTHRSNQVCAPEYVFVISEIGGERRFASAVASRLESLGALTKGDRKANAQTRDLAKYNFETKYGKAALKKLWELLVSHENMFVSWDYDALPDFITPEYTLKAFLNDAYKALDDVGYISHMTAHQSDVTTFGNRILGVPLLLQNRIFATFTAIMDSVLLRARRDGSFDEGIVDVGCRGEHVTIRGEAKVVRVTDAMGAEARTLHYTFDIDRGFSWEQAESILSDHKNRFRKEVGEEDRESGFFVGRSELYESYPGVAIKVIGTNSFRILRPSTGWTEQKTRKDVNSTCKFARTPASLRKTRADWENIYKQTERRCLHLARGAACTNYGCTHGMRRTTVHVMAGCILPVWKNIDRALNNYVNKLRIVRITTSDGQRVVGLDVPDQYIARALGAINNKDVPLLPPSGEEASGQSGRGRRGGRGSRGSRGGGSGGSGGGVLPKLGRRAQRWQRLMEQQNSIQRLSRDISRSLDPNVQPPSAAVPASNGGGASSAPMRNSGVLTLDAMLAIVRQRAHRTPVTWPASYD* # ORIGINAL: g6536.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 12616 15368 . - . ID=g6536;Name=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 12616 15368 . - . ID=g6536.t1;Parent=g6536;Name=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 15258 15368 . - . ID=g6536.t1.exon1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 15258 15368 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 15100 15143 . - . ID=g6536.t1.exon2;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 15100 15143 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 14895 14970 . - . ID=g6536.t1.exon3;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 14895 14970 . - 1 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 14552 14669 . - . ID=g6536.t1.exon4;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 14552 14669 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 14167 14321 . - . ID=g6536.t1.exon5;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 14167 14321 . - 2 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 13858 13945 . - . ID=g6536.t1.exon6;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 13858 13945 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 13497 13639 . - . ID=g6536.t1.exon7;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 13497 13639 . - 2 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 12985 13269 . - . ID=g6536.t1.exon8;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 12985 13269 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 12616 12774 . - . ID=g6536.t1.exon9;Parent=g6536.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 12616 12774 . - 0 ID=cds.g6536.t1;Parent=g6536.t1 #PROT g6536.t1 g6536 MSQPLNPPPNKGKGPAMPIPPAIKKEASDTTLGGVQKKTFVPTVPVRRKKEDAPAKPEGADGAPKKAAAPTGNLLEKPGMGRGRGMRPRKELKQTMGSFSMGPADRLRAGPSFGGTSYVAFGGGGGGDRDSGSGSGSGSGAGRGRGSGSKAASARAVRAGRERQTEDMEDDSNGIVGDNQPTTLPLAGQRKRKAPSSVKPEPMDEGHGDGAQGADRIAAEAAEQRRDEEKQAPTQPSEILLEALQRDLETLLFMQFPDVLPYVVADRGQQPNAAAPADQQQQQQQQQQRDSQAGGGDASAADAWPPFTNTMRDMKDGLLGKIVVRRSGKTTLQIGHVSLNISSGTPCGFLQEAVAVSPEFKQCIVLGRVGHRLLVTPDVDTMLESAALDVGH* # PASA_UPDATE: g6533.t1, single gene model update, valid-1, status:[pasa:asmbl_7965,status:12], valid-1 NODE_525_length_21818_cov_42.2157 . gene 3208 4452 . - . ID=g6533;Name=g6533.t1 NODE_525_length_21818_cov_42.2157 . mRNA 3208 4452 . - . ID=g6533.t1;Parent=g6533;Name=g6533.t1 NODE_525_length_21818_cov_42.2157 . five_prime_UTR 4430 4452 . - . ID=g6533.t1.utr5p1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . exon 4375 4452 . - . ID=g6533.t1.exon1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . CDS 4375 4429 . - 0 ID=cds.g6533.t1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . exon 4208 4278 . - . ID=g6533.t1.exon2;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . CDS 4208 4278 . - 2 ID=cds.g6533.t1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . exon 3918 4042 . - . ID=g6533.t1.exon3;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . CDS 3918 4042 . - 0 ID=cds.g6533.t1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . exon 3630 3690 . - . ID=g6533.t1.exon4;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . CDS 3630 3690 . - 1 ID=cds.g6533.t1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . exon 3208 3416 . - . ID=g6533.t1.exon5;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . CDS 3357 3416 . - 0 ID=cds.g6533.t1;Parent=g6533.t1 NODE_525_length_21818_cov_42.2157 . three_prime_UTR 3208 3356 . - . ID=g6533.t1.utr3p1;Parent=g6533.t1 #PROT g6533.t1 g6533 MSLEQYDAELNNLRTFDQELQKHSQARQQMEVQLNENKLVLQEMKLLKDDSEVYRLMGPALVKQELGEAKGSVERRLEYINSEVKRLDKLIKDTEKKSEESREKVMRMQQSIAKQGQPQAAKA* # ORIGINAL: g6538.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 18277 20183 . - . ID=g6538;Name=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 18277 20183 . - . ID=g6538.t1;Parent=g6538;Name=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 20127 20183 . - . ID=g6538.t1.exon1;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 20127 20183 . - 0 ID=cds.g6538.t1;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 19673 19825 . - . ID=g6538.t1.exon2;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 19673 19825 . - 0 ID=cds.g6538.t1;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 19070 19543 . - . ID=g6538.t1.exon3;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 19070 19543 . - 0 ID=cds.g6538.t1;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 18639 18797 . - . ID=g6538.t1.exon4;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 18639 18797 . - 0 ID=cds.g6538.t1;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 18277 18393 . - . ID=g6538.t1.exon5;Parent=g6538.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 18277 18393 . - 0 ID=cds.g6538.t1;Parent=g6538.t1 #PROT g6538.t1 g6538 MYDEFNAAIDCSAGATALEGKFVLILDNFGADGNFLLHHFVSVHARASKRIVLVSFSQILHHYVLAGRKLGVNLATLQASGNLVSIDACTHLFDSQWRAEQTNAGTVTPVVARSDGVSQSVSTFTTSSAGRNAHPHTHTRRTRAASRGEFSGAAPTSLPEANALDSLFKAISDAVLVVGAEHGVASAHSGVCVVVDDLSGAIAAGISVRDVMNTMIKLRVLVCGPRVKGCLVALAHEDADAPVTSDARANVGIAYPLRHLCDHCVISEPLSTGYSIDVHGQLTATEPHAHPPKPPVVLQYKIMDHMVSFFAPGMSRATL* # ORIGINAL: g6539.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 20981 21694 . + . ID=g6539;Name=g6539.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 20981 21694 . + . ID=g6539.t1;Parent=g6539;Name=g6539.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 20981 21241 . + . ID=g6539.t1.exon1;Parent=g6539.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 20981 21241 . + 0 ID=cds.g6539.t1;Parent=g6539.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 21473 21694 . + . ID=g6539.t1.exon2;Parent=g6539.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 21473 21694 . + 0 ID=cds.g6539.t1;Parent=g6539.t1 #PROT g6539.t1 g6539 MRNLHALSSLRRTCSWARDAVDGWLGGWLGTVVGNIAALCDESGGSDSDGAAEMINMCADYVEGTLQSESVALRARRFASLKRQLMEGGDLSASAAYLSSAARASDVLADSLAAHSLRITSFRKNAYLAVGAFGTTVDCYFDIRLPGSPSPDGGDVVRLT* # ORIGINAL: g6532.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 2555 3084 . + . ID=g6532;Name=g6532.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 2555 3084 . + . ID=g6532.t1;Parent=g6532;Name=g6532.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 2555 2682 . + . ID=g6532.t1.exon1;Parent=g6532.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 2555 2682 . + 0 ID=cds.g6532.t1;Parent=g6532.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 2901 3084 . + . ID=g6532.t1.exon2;Parent=g6532.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 2901 3084 . + 1 ID=cds.g6532.t1;Parent=g6532.t1 #PROT g6532.t1 g6532 MQDAVHINVGSSLRSVTLPKHGVADIKIRADDRIIATGGWDSCIRLFGLRTLKPLAALKAHDATVNCVAFSSPHATEGGPSKVLLAGGSKDTKISIWDVYNAQ* # ORIGINAL: g6531.t1 original gene structure, not modified by PASA NODE_525_length_21818_cov_42.2157 AUGUSTUS gene 539 1769 . + . ID=g6531;Name=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS mRNA 539 1769 . + . ID=g6531.t1;Parent=g6531;Name=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 539 639 . + . ID=g6531.t1.exon1;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 539 639 . + 0 ID=cds.g6531.t1;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 761 889 . + . ID=g6531.t1.exon2;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 761 889 . + 1 ID=cds.g6531.t1;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 1006 1130 . + . ID=g6531.t1.exon3;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 1006 1130 . + 1 ID=cds.g6531.t1;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 1299 1348 . + . ID=g6531.t1.exon4;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 1299 1348 . + 2 ID=cds.g6531.t1;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS exon 1650 1769 . + . ID=g6531.t1.exon5;Parent=g6531.t1 NODE_525_length_21818_cov_42.2157 AUGUSTUS CDS 1650 1769 . + 0 ID=cds.g6531.t1;Parent=g6531.t1 #PROT g6531.t1 g6531 MNTPLPMCVLRGSTAPISCIKFHAKNESLVLLSGSSDGALRVWDMNTRRSSLTLPHAHDKKGVVALDYLPGSPLLLSQGRDGAVKLWDLQGSLSEPVSTLPMECITFCKMSPMHGGADDASGSHLLATPCSDAEKIDIWDTRTKTPCMSYRAPDTLDKSALGTAGWIVYRPSVS* # PASA_UPDATE: g6537.t1, single gene model update, valid-1, status:[pasa:asmbl_7966,status:3], valid-1 # PASA_UPDATE: g6537.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7967,status:3], valid-1 NODE_525_length_21818_cov_42.2157 . gene 15749 17902 . + . ID=g6537;Name=g6537.t1 NODE_525_length_21818_cov_42.2157 . mRNA 15749 17902 . + . ID=g6537.t1;Parent=g6537;Name=g6537.t1 NODE_525_length_21818_cov_42.2157 . five_prime_UTR 15749 15792 . + . ID=g6537.t1.utr5p1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . exon 15749 16103 . + . ID=g6537.t1.exon1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . CDS 15793 16103 . + 0 ID=cds.g6537.t1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . exon 16368 16435 . + . ID=g6537.t1.exon2;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . CDS 16368 16435 . + 1 ID=cds.g6537.t1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . exon 16748 16810 . + . ID=g6537.t1.exon3;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . CDS 16748 16810 . + 2 ID=cds.g6537.t1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . exon 17074 17902 . + . ID=g6537.t1.exon4;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . CDS 17074 17837 . + 2 ID=cds.g6537.t1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . three_prime_UTR 17838 17902 . + . ID=g6537.t1.utr3p1;Parent=g6537.t1 NODE_525_length_21818_cov_42.2157 . mRNA 15749 17902 . + . ID=g6537.t1.1.5b6be70c;Parent=g6537;Name=g6537.t1 NODE_525_length_21818_cov_42.2157 . five_prime_UTR 15749 15792 . + . ID=g6537.t1.1.5b6be70c.utr5p1;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . exon 15749 16103 . + . ID=g6537.t1.1.5b6be70c.exon1;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . CDS 15793 16103 . + 0 ID=cds.g6537.t1.1.5b6be70c;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . exon 16368 16810 . + . ID=g6537.t1.1.5b6be70c.exon2;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . CDS 16368 16810 . + 1 ID=cds.g6537.t1.1.5b6be70c;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . exon 17074 17902 . + . ID=g6537.t1.1.5b6be70c.exon3;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . CDS 17074 17837 . + 2 ID=cds.g6537.t1.1.5b6be70c;Parent=g6537.t1.1.5b6be70c NODE_525_length_21818_cov_42.2157 . three_prime_UTR 17838 17902 . + . ID=g6537.t1.1.5b6be70c.utr3p1;Parent=g6537.t1.1.5b6be70c #PROT g6537.t1 g6537 MHVITRLSAVTHHSTCGTLRRTVGTCAPFVRNFITLGHPSPLLQSRLIATTKVLSSVNASVNGRAPARNMSRDHKDANADGRKTVLVTRRLPPKAMARLEAVQGINLLTWDSEQPIARADLLSRVRGVDGLLCLLTDKIDTELLDAAGPSLKVVSSMSVGIDHIDASACRLRGISIGNTPGVLTEATADIALMLALMAARRAVEATEAVRSGEWGAWQPLWMCGRDIAGATVGIVGLGRIGAAVARRMRACGASTVLYSGSRKKKDAAAEVAGEFVPLGDLLRRSDFVFATCALNDATKGLFDYAAFTAMKPTAVFVNTSRGGVVNQDDLVRVLTERRVFAAGLDVTTPEPLPTDHPLLSLRNCVVLPHIGSATIDTREAMASLAVDNVIRGLVAPLPPPS* #PROT g6537.t1.1.5b6be70c g6537 MHVITRLSAVTHHSTCGTLRRTVGTCAPFVRNFITLGHPSPLLQSRLIATTKVLSSVNASVNGRAPARNMSRDHKDANADGRKTVLVTRRLPPKAMARLEAVQGINLLTWDSEQPIARADLLSRVRGTWYCVNGACGAALSLTPAVTYAANRDKTQRNASHTMPPSTISTTWRCCRQRRVCSSSLPHAIDKQHYCFVFHTLLSRCCGVHGYIAQRTDLNPWSLSGCFGSAGVDGLLCLLTDKIDTELLDAAGPSLKVVSSMSVGIDHIDASACRLRGISIGNTPGVLTEATADIALMLALMAARRAVEATEAVRSGEWGAWQPLWMCGRDIAGATVGIVGLGRIGAAVARRMRACGASTVLYSGSRKKKDAAAEVAGEFVPLGDLLRRSDFVFATCALNDATKGLFDYAAFTAMKPTAVFVNTSRGGVVNQDDLVRVLTERRVFAAGLDVTTPEPLPTDHPLLSLRNCVVLPHIGSATIDTREAMASLAVDNVIRGLVAPLPPPS* # ORIGINAL: g12775.t1 original gene structure, not modified by PASA NODE_8783_length_355_cov_40.1321 AUGUSTUS gene 1 355 . - . ID=g12775;Name=g12775.t1 NODE_8783_length_355_cov_40.1321 AUGUSTUS mRNA 1 355 . - . ID=g12775.t1;Parent=g12775;Name=g12775.t1 NODE_8783_length_355_cov_40.1321 AUGUSTUS exon 1 355 . - . ID=g12775.t1.exon1;Parent=g12775.t1 NODE_8783_length_355_cov_40.1321 AUGUSTUS CDS 1 355 . - 1 ID=cds.g12775.t1;Parent=g12775.t1 #PROT g12775.t1 g12775 ALPLRRGHILRRQPRVQGHSVPSSRPHRRRLSPLQGAHIHSRLDSRPPQVVAAVGICRRSHTRLLSLCIPLHVVPGVLSVPLQPHARPSPVVHCVGHRRTRHHKDHKQSRQQRRAAAL # ORIGINAL: g7476.t1 original gene structure, not modified by PASA NODE_3128_length_4246_cov_43.8 AUGUSTUS gene 203 3737 . - . ID=g7476;Name=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS mRNA 203 3737 . - . ID=g7476.t1;Parent=g7476;Name=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 3720 3737 . - . ID=g7476.t1.exon1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 3720 3737 . - 0 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 3487 3585 . - . ID=g7476.t1.exon2;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 3487 3585 . - 0 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 2945 3244 . - . ID=g7476.t1.exon3;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 2945 3244 . - 0 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 2561 2745 . - . ID=g7476.t1.exon4;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 2561 2745 . - 0 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 2082 2202 . - . ID=g7476.t1.exon5;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 2082 2202 . - 1 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 1522 1633 . - . ID=g7476.t1.exon6;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 1522 1633 . - 0 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 528 572 . - . ID=g7476.t1.exon7;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 528 572 . - 2 ID=cds.g7476.t1;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS exon 203 297 . - . ID=g7476.t1.exon8;Parent=g7476.t1 NODE_3128_length_4246_cov_43.8 AUGUSTUS CDS 203 297 . - 2 ID=cds.g7476.t1;Parent=g7476.t1 #PROT g7476.t1 g7476 MAHIEQGASVWVKTKVTWEAGKVLDSKNGALVIKTEDGEALCDLGSLKWCKSGNNDNNIFNLVIFSHSMLFSYAVLALFAVGLLSQSVTLEAAKATRDSVLPMHQSSVESVEDMAVLGDLHEGAILHNIRKRYQKDYIYTYIGSILCAVNPYKGLDIYNDKILKSYNKRVIGELPPHIYAIANESYYALWKTNASQCVLISGESGAGKTESTKLILKYLSTLSNKESLVEKQILESSPILEAFGNAKTVYNNNSSRFGKFIKIQFTDRGNIEGARIIDSLLRLGKAESYRYVKGGNVISDPAINDLEDWKAVRHGMNVMGFSPEQ # ORIGINAL: g3576.t1 original gene structure, not modified by PASA NODE_2432_length_6300_cov_41.4315 AUGUSTUS gene 734 4942 . - . ID=g3576;Name=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS mRNA 734 4942 . - . ID=g3576.t1;Parent=g3576;Name=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 4613 4942 . - . ID=g3576.t1.exon1;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 4613 4942 . - 0 ID=cds.g3576.t1;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 3995 4384 . - . ID=g3576.t1.exon2;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 3995 4384 . - 0 ID=cds.g3576.t1;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 1897 3417 . - . ID=g3576.t1.exon3;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 1897 3417 . - 0 ID=cds.g3576.t1;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 1420 1770 . - . ID=g3576.t1.exon4;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 1420 1770 . - 0 ID=cds.g3576.t1;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 734 1252 . - . ID=g3576.t1.exon5;Parent=g3576.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 734 1252 . - 0 ID=cds.g3576.t1;Parent=g3576.t1 #PROT g3576.t1 g3576 MLPPSPPERLVEADVHGIPVTLYRLPSTGLRVCIAGAGGPLVHGYLALATEARDDDGLPHTLEHLVFLGSEDYPYKGVLDMAANRCLAQGTNAWTATDHTSYTLTTAGSEGFLNLLPVYIDHVLYPTLRETGFVTEVYHVNGKGEDAGVVYSEMQGVENGGDNIAYRHLVAQLYPGDNGYVSETGGSLHNLRTTCTHRRVVDYHRSYYRPDNLTVVVVGQVEHAEVFKALASVERKILSKPTPPPMQRPWTTPLCDLRGSVSVGVEFPSDDDEENGLVMIGWRGPDVADTRGVHALRVLWTYLTESPVAPLQRELVEREDDPLCSSVDFSIETFSSTAHYIKLSGVAVDALDEAAEGAMDVLSRISSGEEAIDAQRMSAVIAKLRLDAISTLELEPHDTIAEAVISHVLYDSAPDELAGRLGVIAHLDALATEPASFWRELLANAVVARPRVSVSARPSEKLAALLQHDTQARIARRAAELGEGGLQGLAAALDAASAQNAVEAPIEMIGRFPVPGTSTIRFHPVETLVHPGRFVPPPSGGENAPAVLASSGAAPAVDAPYFVQVDSVRTEFVDVSVVMDTARVPTSLRPLLPLYCELMFENSVTRDGAVLAHTAVIAGLEEDTLEHGASLGFRGSTFDTGRFPQALVVHMRAEAAKFLRGVGWLRDVLFAPVFSADRAKVVATRIMNDVAEYKRKGSAIVGALTRDVLLEGRDCNALAVNMVRQDAALGALVEAVASAPKDVVGSLESIHASVVALDNMRIHVACDASRHPDLLTTLQSALSPPVGASVPLSTVASGILPRIPLGVADTREFLRPGRNGRASVVGVGAIESSFLAIACEGVASFDHPDVAPLMVLIEYLTALEGPLWRQIRGLGLSYSYNIRLSPDDSLLYFTLYRSSNPVRALEVASDIIRGFAAGETDIEHVRLEAAVSGVVFELAERERGVADAADESFLANFMHGALPGHNRRLMGAVKAVGAADVRRVAGEYIGRLLRPELTAAAVCCTANKTEEMRLFLAGRGYTVSPFDSVEAAFASA* # ORIGINAL: g3575.t1 original gene structure, not modified by PASA NODE_2432_length_6300_cov_41.4315 AUGUSTUS gene 50 404 . + . ID=g3575;Name=g3575.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS mRNA 50 404 . + . ID=g3575.t1;Parent=g3575;Name=g3575.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 50 215 . + . ID=g3575.t1.exon1;Parent=g3575.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 50 215 . + 1 ID=cds.g3575.t1;Parent=g3575.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS exon 354 404 . + . ID=g3575.t1.exon2;Parent=g3575.t1 NODE_2432_length_6300_cov_41.4315 AUGUSTUS CDS 354 404 . + 0 ID=cds.g3575.t1;Parent=g3575.t1 #PROT g3575.t1 g3575 GMLPPALLGGDGGHPRMHPQAYMGGPYPPGNSAIMSQFFPQQDALAAEMGGMRIGERPTGGTDEAAVAGKV* # ORIGINAL: g1145.t1 original gene structure, not modified by PASA NODE_4402_length_1667_cov_37.696 AUGUSTUS gene 32 1579 . - . ID=g1145;Name=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS mRNA 32 1579 . - . ID=g1145.t1;Parent=g1145;Name=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS exon 1409 1579 . - . ID=g1145.t1.exon1;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS CDS 1409 1579 . - 0 ID=cds.g1145.t1;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS exon 1243 1321 . - . ID=g1145.t1.exon2;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS CDS 1243 1321 . - 0 ID=cds.g1145.t1;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS exon 984 1022 . - . ID=g1145.t1.exon3;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS CDS 984 1022 . - 2 ID=cds.g1145.t1;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS exon 492 627 . - . ID=g1145.t1.exon4;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS CDS 492 627 . - 2 ID=cds.g1145.t1;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS exon 32 175 . - . ID=g1145.t1.exon5;Parent=g1145.t1 NODE_4402_length_1667_cov_37.696 AUGUSTUS CDS 32 175 . - 1 ID=cds.g1145.t1;Parent=g1145.t1 #PROT g1145.t1 g1145 ALRGLHLYFHADGGGLDLDQLDTLDYKALKFIFKLYGNTTEELFRKYNELEAAEGDKKAENRGEISLQLSFKPLYSGATLTVKVKGAANLPGRVLSGTLNPYVELELLPRVVDGVALYDGKKLATKMRMRTVDPNFNQEFTFNITKVVPDMSLHVAVYDFDVIRVDEFVGGTSIPLDDISRKGSIDDIM # ORIGINAL: g6982.t1 original gene structure, not modified by PASA NODE_638_length_19840_cov_44.389 AUGUSTUS gene 8466 10465 . - . ID=g6982;Name=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS mRNA 8466 10465 . - . ID=g6982.t1;Parent=g6982;Name=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 10206 10465 . - . ID=g6982.t1.exon1;Parent=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 10206 10465 . - 0 ID=cds.g6982.t1;Parent=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 9785 9995 . - . ID=g6982.t1.exon2;Parent=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 9785 9995 . - 1 ID=cds.g6982.t1;Parent=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 8466 9620 . - . ID=g6982.t1.exon3;Parent=g6982.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 8466 9620 . - 0 ID=cds.g6982.t1;Parent=g6982.t1 #PROT g6982.t1 g6982 MGSDDTARRLSTSFIIDGRAIAYGLATFAITLIHNVFLLYHVDVFVTNYGISRSAFYWSQLVFLIWNSVNDAIFGWLSDSSQLQEDASQTRVTKATLRRRLRVIGLGGPLLALSFMLFWVPWHSPGVQFVLCLCLYDGFLTWVDLNHKALLADLAVETEERARLAGHASAFSAIACASVFLSYPFRAAVSLYPFRVYCAVLAGLSAACFVASAGFLSMSIDKSDRGRRGLVSFLRREGHDNTRFSNSAAATPSHKALKSDDDASPVNGVKSVVKYVREVSRYRNLWLFGLMNLIQTFHCHFNSNFFPLFLRHLGTGPGGLGRTFAGILLGLSFVMPHANNIFFSGVAARVGVYSVVRGLFVAKLALAAAMLLLPGAGPSSSSALLALFVVSNRIFTEGTCRLLGLVVGDIVDEDYIIHRRRQAVSALIYGTTNLLSKAGQTLAPVLGTLFLSATTRGMFVSDGDETSQLAHVVLRDGDAAEDAVLVVNSDMRDALYWMLIFVSIACGVTQLIVWSQFTLHGTYLRKIKDRIAESQRDEAIA* # PASA_UPDATE: g6983.t1, single gene model update, valid-1, status:[pasa:asmbl_8617,status:3], valid-1 NODE_638_length_19840_cov_44.389 . gene 10927 13397 . + . ID=g6983;Name=g6983.t1 NODE_638_length_19840_cov_44.389 . mRNA 10927 13397 . + . ID=g6983.t1;Parent=g6983;Name=g6983.t1 NODE_638_length_19840_cov_44.389 . five_prime_UTR 10927 10993 . + . ID=g6983.t1.utr5p1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 10927 11002 . + . ID=g6983.t1.exon1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 10994 11002 . + 0 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 11312 11467 . + . ID=g6983.t1.exon2;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 11312 11467 . + 0 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 11605 11977 . + . ID=g6983.t1.exon3;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 11605 11977 . + 0 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 12341 12465 . + . ID=g6983.t1.exon4;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 12341 12465 . + 2 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 12659 12806 . + . ID=g6983.t1.exon5;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 12659 12806 . + 0 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . exon 13000 13397 . + . ID=g6983.t1.exon6;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . CDS 13000 13154 . + 2 ID=cds.g6983.t1;Parent=g6983.t1 NODE_638_length_19840_cov_44.389 . three_prime_UTR 13155 13397 . + . ID=g6983.t1.utr3p1;Parent=g6983.t1 #PROT g6983.t1 g6983 MSKDGAVQEARKIAQKLRFSAQIATGSEVKPISNFLTLKELYVRISETFSIDIKDVVFCTLNSPSPSDMDHLLGGQLAYDDLIYVHLRGEEKSVKAVKSKPTIGLSITDNCNGYPFIKRVYPDSILAGLREVELGDIISAVNGESMIGKKHSDVAEALKSIPQGGTLELKLIGIRKGQANAAAPARKSQSKAQTMGRNKCKYGTMRLRDSVTQADPSMFQPETAAAAPAAAPPAAAAAAAAASESAEAEETKKKIMELLEGFMGVGDEEMADFVYTIATEAEDKVSFIKHVHTQMGDFGFPDDLIGDFWHIVYGGEAVAVT* # ORIGINAL: g6985.t1 original gene structure, not modified by PASA NODE_638_length_19840_cov_44.389 AUGUSTUS gene 18573 19718 . + . ID=g6985;Name=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS mRNA 18573 19718 . + . ID=g6985.t1;Parent=g6985;Name=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 18573 18683 . + . ID=g6985.t1.exon1;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 18573 18683 . + 0 ID=cds.g6985.t1;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 18814 18866 . + . ID=g6985.t1.exon2;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 18814 18866 . + 0 ID=cds.g6985.t1;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 18970 19065 . + . ID=g6985.t1.exon3;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 18970 19065 . + 1 ID=cds.g6985.t1;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 19188 19253 . + . ID=g6985.t1.exon4;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 19188 19253 . + 1 ID=cds.g6985.t1;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 19442 19718 . + . ID=g6985.t1.exon5;Parent=g6985.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 19442 19718 . + 1 ID=cds.g6985.t1;Parent=g6985.t1 #PROT g6985.t1 g6985 MAAVRDVPDGLASEFGAAAWGNPLDLFDFNFDPNVLQVALDQQKFEISELEPLSSFHGMSPKSEGTSTGLSFDSPLSLDSIDTILPGVVPMQVGEQSSSDDGSDGNDKSAADGSSHSAGSRRRAGRMDPETRRQSRVVREKKRQQNISNGYDEIKALVPGCSDYKISRVRMGQSVHDGGCCVRACYTLATIGVDVLVVFV* # PASA_UPDATE: g6984.t1, single gene model update, valid-1, status:[pasa:asmbl_8618,status:12], valid-1 NODE_638_length_19840_cov_44.389 . gene 13592 17617 . - . ID=g6984;Name=g6984.t1 NODE_638_length_19840_cov_44.389 . mRNA 13592 17617 . - . ID=g6984.t1;Parent=g6984;Name=g6984.t1 NODE_638_length_19840_cov_44.389 . exon 16127 17617 . - . ID=g6984.t1.exon1;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . CDS 16127 17617 . - 0 ID=cds.g6984.t1;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . exon 14472 15942 . - . ID=g6984.t1.exon2;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . CDS 14472 15942 . - 0 ID=cds.g6984.t1;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . exon 13592 14197 . - . ID=g6984.t1.exon3;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . CDS 13659 14197 . - 2 ID=cds.g6984.t1;Parent=g6984.t1 NODE_638_length_19840_cov_44.389 . three_prime_UTR 13592 13658 . - . ID=g6984.t1.utr3p1;Parent=g6984.t1 #PROT g6984.t1 g6984 MTRKRGLPSDEEDAQPERKVPRFTLKTWNAAVGRSPKESPAKTPKLRLRTAQATTTPASTPAAGPTTNSGGKLKLAVGAATPNTPKATTPVAKSSGKLRLSTGGKDASPAAPQSSGKKITLKVDAGGKDKEKGKGTDVLKSPRVDSHKRKRPDYTSDEDEGPSSPALVASKVILLAKKGGKPAAVAVVSVKKKVGGKDKPTVQDVDTDVEVASPAANKKDKGKAEKRRHSGKGVGTADDNEPPAAPETPKKSAKKNKDGNRSTAGAMASPELKAIFVRLVDALAKKDEYEVFQNPVDTDAVPDYLTVIKHPMDFGLMRTKANGGKYKAVSDVAADLEFICDNAMVYNMDSSWIFKAAQTLRRNAQKIIDAESANEKDVRDQAARVEAERLQKAKEDADAIAAAAAAAAAAAASERKKQKPKNISDEGIEDDGRAPKKKKKKAQGESDEDAGDTSTVPKKKNASRLPPTGKALEKIYVGVHAIVAAKDVEYGGVFAEPAEVPDYYDVIKNPMDLGTIAKNIKEGKYADLDALSSDFHLIWDNAKLYNEDGSPIFELAVLLAKESQSAIDAAKKKIADAVEAAAKAEKAAEKKAAALKAAEDKASGKGKEKKAKEEGKEGKEKKEKKSNAPKGPPTGKRLMKVLVAVHAIVAAKDVEYGGVFAEPVDKAEVPDYYDVIKNPMDLGTIAKNIKEGKYADLDALSSDFHLIWDNAKLYNEDGSPIFELAVSLAKESQAATDAAKKKIADEIAKEERAVAKDAAKVSQKDASRATIEAAASKGSKDVPTKTGVVDGKGARKPAAEGDKQQRRKSDAAEKAEVPARDDRKGSDTPATKSSSADAAAPRPLAPKAVVDTPIATTKLAQKPVAATPQQALSSQQTQHTQQTPNASAPGAATQSAAKPPVAVKLRTTLEAEIAREKEVARSLAAAGALLERLKKKGGLRVVGLDANAAMEALKTGNLGKARVSEVLTAGKALVKGTFPYPPMQSRPVAQLLRTPYMSFAPSYDSSRSTLTSQESDLLAAAYGDQLGLSYVRSVASFAEGADEQSAANADNEFPGVGTVVDNLIDRLTAGAHSKIRRAIDRPNTPFDALLREIISGTDESAIARAAADAVGAVAEREREREKDAAQKAAAGRAVPAIDADIVRSLRDEGFDVGFLEALVAPTVAQG* # ORIGINAL: g6980.t1 original gene structure, not modified by PASA NODE_638_length_19840_cov_44.389 AUGUSTUS gene 1 3130 . - . ID=g6980;Name=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS mRNA 1 3130 . - . ID=g6980.t1;Parent=g6980;Name=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 3058 3130 . - . ID=g6980.t1.exon1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 3058 3130 . - 0 ID=cds.g6980.t1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 2574 2888 . - . ID=g6980.t1.exon2;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 2574 2888 . - 2 ID=cds.g6980.t1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 1708 2040 . - . ID=g6980.t1.exon3;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 1708 2040 . - 2 ID=cds.g6980.t1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 1083 1469 . - . ID=g6980.t1.exon4;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 1083 1469 . - 2 ID=cds.g6980.t1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 519 836 . - . ID=g6980.t1.exon5;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 519 836 . - 2 ID=cds.g6980.t1;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS exon 1 155 . - . ID=g6980.t1.exon6;Parent=g6980.t1 NODE_638_length_19840_cov_44.389 AUGUSTUS CDS 1 155 . - 2 ID=cds.g6980.t1;Parent=g6980.t1 #PROT g6980.t1 g6980 MGRHAGVRILVAALVCLLARSSLAGTLEDEVWGASSSFNATDKGNGTVNVVFYNIAPTSSDVTTVSKYLVSVDDGVAVPLSPSTTTYDFKNLLGNATHVFKLQVEVLVSGVVTIVDSPQSGLNVDVASYGIVWNSVPLAGKAVPNPEIFPTISTVTIDVNKFFKASTGAASLILNSPLKTLGYRCPGASSDTNLDITLSSWKVTCTTVTIACGISANVTVKATGTVGATASATLSVSGLCHTNWSGKALTFTNRATNAFDIIVPYPTAIGSGTSFVAHIYNWDGTTATFLTTSCNSIPSNPGDNTTLSVPDVGRTETLAAGKSYRVKFFALVAGMDSSSFCTGSTPTDPTGTMTANTQYLVATVNTTGENPKWTGSATTSVVRNADSRQLLVAWPKPSFVGSFVAYNVTVVVKDMKTSIVSAPSAVGTPITNVNTLSVLSTMQPSKNYTFTITATSTWDNVRYSSAVTAQEIIGNAYVWPAASDAIVFASTSSALEANRTADPSVAPSDYNVTVTVTGPGGFYYKSP # PASA_UPDATE: g6981.t1, single gene model update, valid-1, status:[pasa:asmbl_8616,status:3], valid-1 NODE_638_length_19840_cov_44.389 . gene 5265 8154 . + . ID=g6981;Name=g6981.t1 NODE_638_length_19840_cov_44.389 . mRNA 5265 8154 . + . ID=g6981.t1;Parent=g6981;Name=g6981.t1 NODE_638_length_19840_cov_44.389 . five_prime_UTR 5265 5578 . + . ID=g6981.t1.utr5p1;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . five_prime_UTR 5862 5932 . + . ID=g6981.t1.utr5p2;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . exon 5265 5578 . + . ID=g6981.t1.exon1;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . exon 5862 5975 . + . ID=g6981.t1.exon2;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . CDS 5933 5975 . + 0 ID=cds.g6981.t1;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . exon 6245 6306 . + . ID=g6981.t1.exon3;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . CDS 6245 6306 . + 2 ID=cds.g6981.t1;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . exon 6584 8154 . + . ID=g6981.t1.exon4;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . CDS 6584 7534 . + 0 ID=cds.g6981.t1;Parent=g6981.t1 NODE_638_length_19840_cov_44.389 . three_prime_UTR 7535 8154 . + . ID=g6981.t1.utr3p1;Parent=g6981.t1 #PROT g6981.t1 g6981 MGNEQSHKSFNAEKVKEYLNNARADFDSKFGQKSNSGFGLESFDRIGTLGTGSFGRVMLCKAKHNGEYYAMKILRKERVVKLKQVEHSLNEKHILAAINFPFVVNMLCAFQDKANLYMLLEFIVGGELFSYLRRVGRFPEDQTRFYGSQIVLAFEYLHALNLIYRDLKPENLLIDSRGYIKITDFGFAKLVKDRTWTLCGTPEYLAPEIILSKGYNQAVDWWALGILIFEMAAGYPPFFAEQPIEIYEKIVAGRLNFPSHFSAEIRDLLKNLLAVDITKRFGNLKDGVSDIKTHKWFATLDWGAIFERSVVAPYLPPVKGPGDMSNFDQYEEEEITTNVMVDPYEKFFENF* # ORIGINAL: g10315.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 25537 26808 . + . ID=g10315;Name=g10315.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 25537 26808 . + . ID=g10315.t1;Parent=g10315;Name=g10315.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 25537 26808 . + . ID=g10315.t1.exon1;Parent=g10315.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 25537 26808 . + 0 ID=cds.g10315.t1;Parent=g10315.t1 #PROT g10315.t1 g10315 MATAQCITATLHYTRPAALASSGGPHVSGNATPNGLVPVDVTITDARTVHPAPRLFECGFEVISAPSRLRTANFFSTNAKVDIETRYFEDVSNSVRRVTGASHVTPFHYAIRRADPPIGNSDVTSGVNAHASRERSSSRDVNNAVEKPAPIVHCDYSVRTALKLFEVLSVDARFRKGRFAVINAWRNIDDACPILTDHLAVCDARTVVAPDDFIPITRVDALGASHDSYQLDATHSPLHAWFYYPAMCSSELLLFVQYDSNARAPARYTFHSSFSDRSCPPEYAQMHPRQSIECRCVAFFPDYTPNTIFLMHAMGDEIVSAAVSAIMLAIGYPDRWPEIARVWMRKTLYDSDGVANVVRELVIGGAKRAQHGLDRATADQLQKTIAMLLDPSTGFEAKAKANFAQINTIEWIGKMASAAFGKR* # ORIGINAL: g10308.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 913 3975 . + . ID=g10308;Name=g10308.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 913 3975 . + . ID=g10308.t1;Parent=g10308;Name=g10308.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 913 3975 . + . ID=g10308.t1.exon1;Parent=g10308.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 913 3975 . + 0 ID=cds.g10308.t1;Parent=g10308.t1 #PROT g10308.t1 g10308 MDVRVMSAPNPTANSVGGGVQQPTAMATHIPQAGAVAVSVGAVGGIAHSAATIEYRDIVDRMREMERRERALSEQLAQRDSLLEKQRAAYLKEVIILREQLYQKSKQGANYNAYDVGKVFDPAQFKTGSQQQQQQQQQQLQHAQNSQKRMTDGTADANHQRDITLSNGRDAQSALLSAMFPSPRQPGPSGAALGENPGEEATVHHAGEDNDGEKRRLRMEAQSERRKLVLAMQRCKCGGARVGNAYNMETYSETITRLTEELSRTRTENTVRVDALEERLRDRDMDVERLRRELGHVQQQADQTMARTTAENIELVTTNKTLRLAMEQMASRLDEYDALIGENKVTISRLNDSVSDARRLLEFERTRADLAEKGADSLQAQLDSHMRKLRSTQAELSLIEMGGNTHLARRLSLGSSMGSAPRHAASNNSPTIGSKTVVVDERVPTYGETAPDAPLLLRLNICVTGEAPKHVDFNLPPSVSDCGVQTDPVAAPPPTKSKKGGKKTAQREDALSYARAMAAVFGSKQNVSPPSAKAHSSKETGVVASAVSSSNSALVRIPSGPSLPSPDDEDYDGGLSSRPNSVDPHDSDKVAQRARALRKLQGDANLARFEGISAHDVAEQSVSVSNARDARCLFRCDSWERLAVPNESPALHRTGSLPDLNWFPRDYSHSESTNAPRSVRFAKADDDAPVDDNDSDCEFEQAIERVTHPRVYMRGAAPSPADDADQEEGDGDLRSGMSRPSRRVSFRDETVVDASAVRPISARQMQTVAHATAAYHAQMQQQTQQRANVSIIELAGANSYTPRTEWKYLPTVGGATGTTGRPASPNARPLSGKRPGSAYTSVDTTSTALVVRPASPKAWAESFTYEGHVRQHSQQVVVAQQAASVRPRPPSAPRPQPQANRVTRARPQSAVASTHTHSSGDMSTMHGYSPSLSSADVSSMYAASSGGTPFVSFSSTASLRRRPQSARTGFKRPRELGAVQLLKDAMCDEQLLMTLREQTRKAYAMNRSGSNPYSGPGAGH* # ORIGINAL: g10311.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 13433 15255 . - . ID=g10311;Name=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 13433 15255 . - . ID=g10311.t1;Parent=g10311;Name=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 15145 15255 . - . ID=g10311.t1.exon1;Parent=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 15145 15255 . - 0 ID=cds.g10311.t1;Parent=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 14746 14922 . - . ID=g10311.t1.exon2;Parent=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 14746 14922 . - 0 ID=cds.g10311.t1;Parent=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 13433 14512 . - . ID=g10311.t1.exon3;Parent=g10311.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 13433 14512 . - 0 ID=cds.g10311.t1;Parent=g10311.t1 #PROT g10311.t1 g10311 MANLEDGFVEVTPDSGIKKKVLREGTGQLPVCAKGAKAVIHYVAYRDDGTKVDSSYEMRLGPFELRMGKEFCIKAWEPAVKSMRIGEKAVFNCTSEYSSGYPQLAQVLRKQDKKKREEEEDEEEDEDDGCHDAGHGHSHAHSGHGHSHADGSSCGSDAHADSHGGNHAHGHSHAHGDDSQACAHGHSHDDEHGHGHSHNGETTVCGTDAHDHTHSSACWDGACAAPSTNPEKRKRKKERKARVDDDDGGHACCGAGMQKMLKENGDLVDLYGRDMRFEIELLRVEEAGTFTKDHWEMSLDEKRDAVPRLKDEGNELYKRGEFAKAAEKYGFAIAYCEQVMVERRPGDPHPLDTLLVTCQLNYAACKGKLEDWEEVIKHTSTILEKDPKNIKALFRRGQAHARRGRDLELAEKDLVLVEVLDPDNAEAKKEMRLVNAKMDAARKKEKDMFKGMFAR* # ORIGINAL: g10312.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 16064 16511 . + . ID=g10312;Name=g10312.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 16064 16511 . + . ID=g10312.t1;Parent=g10312;Name=g10312.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 16064 16235 . + . ID=g10312.t1.exon1;Parent=g10312.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 16064 16235 . + 0 ID=cds.g10312.t1;Parent=g10312.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 16366 16511 . + . ID=g10312.t1.exon2;Parent=g10312.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 16366 16511 . + 2 ID=cds.g10312.t1;Parent=g10312.t1 #PROT g10312.t1 g10312 MSGSGHDDERKEDAPGWSMPGSATVQAAAAMIPGLFGAFVPHQPAYVGDDAEINSRPGIHKVDALGSGNLPIGDIGLKPLGPLAPAQHNFDDNITGNEPIPSQQH* # ORIGINAL: g10313.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 17131 22873 . - . ID=g10313;Name=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 17131 22873 . - . ID=g10313.t1;Parent=g10313;Name=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 22346 22873 . - . ID=g10313.t1.exon1;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 22346 22873 . - 0 ID=cds.g10313.t1;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 21830 22158 . - . ID=g10313.t1.exon2;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 21830 22158 . - 0 ID=cds.g10313.t1;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 21105 21702 . - . ID=g10313.t1.exon3;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 21105 21702 . - 1 ID=cds.g10313.t1;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 20420 20947 . - . ID=g10313.t1.exon4;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 20420 20947 . - 0 ID=cds.g10313.t1;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 17131 20247 . - . ID=g10313.t1.exon5;Parent=g10313.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 17131 20247 . - 0 ID=cds.g10313.t1;Parent=g10313.t1 #PROT g10313.t1 g10313 MARSATSHAYSVGAPSIGVANGSGSSVGTVAGVHRGSTLSHVASAFKNGLFGILFVMIKDATIRPFWVIVELCIDMMQLLAFPFNAYSQDFPWNSGQSMWLQRIVKPFVFETYIDTSTAVFFTAVGILILFLLNAVFVGYSFSRNNYRMMWTIRLLRTISGLVSTIFFIPLTGILAARLRCEANTSCWSGFDLFEKILALVVGVAFIFLSLMTGICFSEPSPSARSVLGRPHSRVDLFASIVRASLTVLFTLWDASSTSRWVLSVALLICSVSTSAMFTWYLPYYRHNYSLAKVVTFWVLTWSAVCLLIAQANGTENNQAFVFFLVAIPFIVYSAISAANWRRRYIEQTPCNRLCSASDIELKARFHLIASGIFFTYKPNASNSDMELLIQAGEMQPIDEGAAKKAIAEVNTWYRFAARRNPRSSLLRLFWSNHHQYFMGNNQLALAELQAAEEMSPHLDEQFFIYRRRKMVQDEVAGGKGDVIQFIEFQKHMNDAQQNDSRATKAQLALWTELLKRHPDPMALNRMAWRATTYITRAQTGYQELIRLNPNAPQTFRMYAGFLIDVVHDPLTADMFIARAGELDDAGADREKNAQTGARVLDAESLGVAEMLMDDRFATIAISGDLRKEGSVLEMNTSACRLLGYRPRELLGRNVSAIIPEPFGSHHTRYLRHYLEEGASTVMDRVAFVFAIHKSGYTVPVTMLVRQMCSPTGRIIFLAAMRPVAPTSTNGTEDNYMIVARDGSIITCTAACGGLFGIVPDDFNTGAKLYAQSVVPEYAVYEASAYSETNDTTNTILKEKGRFDSVSMATARGQVTANILVSALASTSGETALVLRFDIAERAVPIERKRFACSADFPQQGAGIPDAIVEESSQPPPLMSIAAARKADTSDDSMDDDDIHVHASIIPRPPSSSRVKEATNRPVSYTNETLPNELPNTPEEASEDTSSPRKSRKFVKMNSKVQFNTTDAAGDDDINAGSATGSAQNLSDTEVRVDVEHAMPQFGNNSYEGRRSLSDMQRPQKARSVTSESHASSTASRIDGVRERILYGDGASTGRLGTVLRVCLLLSVAGIIAIAAISYVDLDRRTTEYASAVENVIQASDRRLHIYEILETTELLVLNNADIYGLYNASTLQSRLSDSADGLDEIHSILYESFKTMSSAQQLLYTSLAIPINTYEGGEKAVQMYNLWNLLEALTSEARAISRLPLSAITEDNPSVYFITQNTLTTTAKAIELSMELYQASAVSANQDASKTANTEVAVAMAITVFATVFVLLPLLVLIERRQTSVIWLFLLVPRQVATAMADHCRSRLESREALDDGRDGDNDSANEEERNDGNGIDGEFVPRSSMKSDHGYSGNDTDNDDNDHVGHAKSRAGKGDGSAAVELPMVNLALRNAHDRRGRGRSHGRKAKRGSIPTLAQRAKLFGVNQARNIVFLVILLAMSVAFFAALHAIVTKFITKNETTAASVNYSNKKNYLTLVSFYLIRELAVANTTERLVHTNELFTNVTLDALQLHNDLLYGNAALGIPGTATEPRFQTLLFKDGCATASPPDCPTFYGGLLSNGLSVAFQSFIRDCKILRVPAYTMPIPRSISTVKAFVDESSMSVMDTFLDQYLRSSMVQMTEMFGTTLTDDVKALQSQHLVGTIVFCCLVGAVYVLLLMPIAGRANHDAKKLQVLLLCVTPDVLKSTPAFASLIRQDYA* # ORIGINAL: g10309.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 4757 7180 . - . ID=g10309;Name=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 4757 7180 . - . ID=g10309.t1;Parent=g10309;Name=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 6989 7180 . - . ID=g10309.t1.exon1;Parent=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 6989 7180 . - 0 ID=cds.g10309.t1;Parent=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 5346 6764 . - . ID=g10309.t1.exon2;Parent=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 5346 6764 . - 0 ID=cds.g10309.t1;Parent=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 4757 5155 . - . ID=g10309.t1.exon3;Parent=g10309.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 4757 5155 . - 0 ID=cds.g10309.t1;Parent=g10309.t1 #PROT g10309.t1 g10309 MVKTATPTQASDAKNGTAKKLSVSPATEGHGEANFARKLAAPDLKTREKSIKRLSTWLARRHATGLFYCFWHSDKPLVQQELADRLAGLMHVFKNTTGSFLFFEGFLACMEREWHGIDRIRLDKFYMLFRRFMHHAVEVVHASGWDTSAIVAFANCLSKHPLSNGRNAPEGIRLHVSDSLLPSIRAVTSGTALPVDALDGMLAPIYSLAAHTESKAVRKRIEEAVFDGIAGDPEDVWLKVEADEDDEQNGELTPAKPSNSDFAARISEMEAVAKRLFELAADKHVPDRNRDWLYATRRKLLTVAETTRTAVQEVAKVTADGVEDDGDSPMEVDSAPVEPVVAKKENASSKKGKKAAKAAKTAAVDVEMTDASANDVVEAPIVTDEKGSKKRKGTPSKSVVTSEVVVTSAVKAATVPVPALSQEAAEESSGKDKKSKKAKKAKLSKEETVEDAYVTAVVEAPKAEKNGDGATTPKGRKRKASESHDDDAAVAVAVAVATQIKGSPVGDAPVVKRKKVDEFLSRTQTPIGTPDSEMKRKVQISLHANKSHLFVRGGSPLAFPNIAAFSPDRRPTRGVLKDCDPPIISPVPATKNAAALKEARKNATNLAMESIRARASEAAEKRRAKIAQRAAASPAFQRTGTPRGKGRHADDSNATPSPRGFVAKASDFF* # ORIGINAL: g10310.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 12054 12836 . + . ID=g10310;Name=g10310.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 12054 12836 . + . ID=g10310.t1;Parent=g10310;Name=g10310.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 12054 12836 . + . ID=g10310.t1.exon1;Parent=g10310.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 12054 12836 . + 0 ID=cds.g10310.t1;Parent=g10310.t1 #PROT g10310.t1 g10310 MESRQEEDANLPPTDILHYLWTNNPYSLIGIGGSYRAAVIDVIPFLERGLRDTNSTSVVDLCSGGGGPLPSIHDALPGVSITLTDLFPNIPAFKAAAHGRPRLTFESKPVDATDCPRHLTGFRTMFLSAHHFTPSLLQRIVADAVDKNAGIALFELQKRSLSSMLASLFLLPLLVMAATPFVGPFSFSRFLFTYIIPVIPFIVTFDGFVSCLRTHSESELRDIADRADPLRRFSWTYGESRPMPAVVVTAFMGVPRQRKT* # ORIGINAL: g10314.t1 original gene structure, not modified by PASA NODE_273_length_28547_cov_43.1152 AUGUSTUS gene 24114 24699 . - . ID=g10314;Name=g10314.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS mRNA 24114 24699 . - . ID=g10314.t1;Parent=g10314;Name=g10314.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 24547 24699 . - . ID=g10314.t1.exon1;Parent=g10314.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 24547 24699 . - 0 ID=cds.g10314.t1;Parent=g10314.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS exon 24114 24191 . - . ID=g10314.t1.exon2;Parent=g10314.t1 NODE_273_length_28547_cov_43.1152 AUGUSTUS CDS 24114 24191 . - 0 ID=cds.g10314.t1;Parent=g10314.t1 #PROT g10314.t1 g10314 MGHPVIGGVEGTGKTTIVKALAVAAVVCSASRVFALVDFREFGDDDIHSDTFHYIPALRTRESLAYYLERRYGGQW* # PASA_UPDATE: g7758.t1, single gene model update, valid-1, status:[pasa:asmbl_523,status:12], valid-1 NODE_1139_length_13628_cov_42.2151 . gene 9809 11420 . + . ID=g7758;Name=g7758.t1 NODE_1139_length_13628_cov_42.2151 . mRNA 9809 11420 . + . ID=g7758.t1;Parent=g7758;Name=g7758.t1 NODE_1139_length_13628_cov_42.2151 . five_prime_UTR 9809 10088 . + . ID=g7758.t1.utr5p1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . exon 9809 10091 . + . ID=g7758.t1.exon1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . CDS 10089 10091 . + 0 ID=cds.g7758.t1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . exon 10269 10304 . + . ID=g7758.t1.exon2;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . CDS 10269 10304 . + 0 ID=cds.g7758.t1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . exon 10492 10556 . + . ID=g7758.t1.exon3;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . CDS 10492 10556 . + 0 ID=cds.g7758.t1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . exon 10750 11420 . + . ID=g7758.t1.exon4;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . CDS 10750 10882 . + 1 ID=cds.g7758.t1;Parent=g7758.t1 NODE_1139_length_13628_cov_42.2151 . three_prime_UTR 10883 11420 . + . ID=g7758.t1.utr3p1;Parent=g7758.t1 #PROT g7758.t1 g7758 MADRGQGKKLQDRAMSDAVTADASEYRRAQTGSTDTFVSDATKAQVEKDRAEGHPDRFKSIAGTKNAPIGKMDPANTQ* # ORIGINAL: g7759.t1 original gene structure, not modified by PASA NODE_1139_length_13628_cov_42.2151 AUGUSTUS gene 11540 13484 . - . ID=g7759;Name=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS mRNA 11540 13484 . - . ID=g7759.t1;Parent=g7759;Name=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 13080 13484 . - . ID=g7759.t1.exon1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 13080 13484 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 12603 12812 . - . ID=g7759.t1.exon2;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 12603 12812 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 12339 12440 . - . ID=g7759.t1.exon3;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 12339 12440 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 12056 12151 . - . ID=g7759.t1.exon4;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 12056 12151 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 11823 11915 . - . ID=g7759.t1.exon5;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 11823 11915 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 11540 11673 . - . ID=g7759.t1.exon6;Parent=g7759.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 11540 11673 . - 2 ID=cds.g7759.t1;Parent=g7759.t1 #PROT g7759.t1 g7759 DEAVPGPVYNPATESLAASTKGQYTIKGRHSVRVQGGPSPSQYPPHYHFGDGHKKSIGYREDITHPRPNGIPGPADYGVSPVGAVKSASPAYTLAARISPCEPDLTPGPGEHYTRAEFGGAKKASIKGRKPELKKMNGPGPGTYNINEEPIGPKYSLYSRRVPSPGSNVPGPAEYTVTTELHTKRTLAGKCAPGFPVILQYPDQLKSKTASPGPAAYLARPKECSAAYTIKGRHKSKIDNGPAPNAYGNPRMPSKSPAFTMGAKISGSRSDSATPGPSDYSADKPHHAPAFTMAPRSTKEQVEETPGPAYTPKIAKKGPAYSMRSRQSPFVYSGYHNIVSLSSFA* # ORIGINAL: g7756.t1 original gene structure, not modified by PASA NODE_1139_length_13628_cov_42.2151 AUGUSTUS gene 236 4658 . - . ID=g7756;Name=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS mRNA 236 4658 . - . ID=g7756.t1;Parent=g7756;Name=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 4287 4658 . - . ID=g7756.t1.exon1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 4287 4658 . - 0 ID=cds.g7756.t1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 3610 4053 . - . ID=g7756.t1.exon2;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 3610 4053 . - 0 ID=cds.g7756.t1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 2956 3394 . - . ID=g7756.t1.exon3;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 2956 3394 . - 0 ID=cds.g7756.t1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 1833 2744 . - . ID=g7756.t1.exon4;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 1833 2744 . - 2 ID=cds.g7756.t1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 1392 1531 . - . ID=g7756.t1.exon5;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 1392 1531 . - 2 ID=cds.g7756.t1;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS exon 236 1027 . - . ID=g7756.t1.exon6;Parent=g7756.t1 NODE_1139_length_13628_cov_42.2151 AUGUSTUS CDS 236 1027 . - 0 ID=cds.g7756.t1;Parent=g7756.t1 #PROT g7756.t1 g7756 MGDQLTPTVIVGHYDGQGASLRSSSDSITSQGCGGSLSPVPGGASRNSSQESLSDIGSNFGDVDVVSEPKPVVCAPSDANGVAATGTTGRRATRMSASYPRYGNALAKTGSRVQLLQVEDKGNEESMLNMPDPQIRGWLMKKARVSGWKRRWFSLEKDRLAYYKSNEDKEARGYMDMSTCMRVWATNHIVDLPRKYENCGFGLQMLDGLYYFLAVNATARTHWVEVLETARLMFPHHAWKKSLKEAEYFKKKSSIQKSDTHVDLKADGDAQEKIPHYGGTLLKKTSNGWKERYFSLNNCSLCWYRSRSDDQPVGVVSMRRVTKVIPVTDTDLDVPVRYHGCAFQVQHPTTPLVLLASRPQAMVIWVDLMRRWVARNMLATKPGQTPLAAQKEEQAAALLNELAEYDGDVDDDGEESGTDALVRLNTLLSYVPRQVLKRFEKDPHLLAQAEAERMNGAVLFADISGFTSLAETLGRKGSKGAEMLSTHLNIYFSQLVDVIHKHGGDIIKYAGDALLALWCNGPLWLSTMMASQCALVMQRQTEKYTAGAVTLTLHIGIGAGRIIGLHIGGVNDRWEYLIGGKPLGQMGEAEGSAKTGEVVLHEKAFSLVRDHCSGRPVGSNKNCYLLESINNFMPLPAPITYETNTTHETCLRAYVQPAVRDMLVSGQAQWLAQLRRMTVVFASLPDLDYDDEEGQLESLQLCMREMQSVVFGLDGFIRQFIIDDKGSVLVAAFYETEDYAIRGITAALQLVEKMHELNFRCAVGVTTGKVFLGAVGSIDRREFAMVGDTVNLSARLMVAAKDGVLCDQASVKGVRMHVSSLSFTPLAPIKVKGKADPIAIFKPKITPDVVHQPVTSTLHRMINKDMVGREAETKVVTDRVNELLSGTRKQSMVVVEAEAGLGKSRMLENARQMAIASNKPLCIIDVVCDALHNSTPFYAWRGFFGGRVFSLDTLQTLDERKEKIHSALAAIGESQASAALLTCVLPSELLPASDANKLDGDRAEKTLAILSALVKLSACGNSILLLIDDAHL* # PASA_UPDATE: g7757.t1, single gene model update, valid-1, status:[pasa:asmbl_522,status:3], valid-1 NODE_1139_length_13628_cov_42.2151 . gene 5936 8927 . + . ID=g7757;Name=g7757.t1 NODE_1139_length_13628_cov_42.2151 . mRNA 5936 8927 . + . ID=g7757.t1;Parent=g7757;Name=g7757.t1 NODE_1139_length_13628_cov_42.2151 . five_prime_UTR 5936 6179 . + . ID=g7757.t1.utr5p1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 5936 6213 . + . ID=g7757.t1.exon1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 6180 6213 . + 0 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 6314 6397 . + . ID=g7757.t1.exon2;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 6314 6397 . + 2 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 6532 6632 . + . ID=g7757.t1.exon3;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 6532 6632 . + 2 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 6771 6884 . + . ID=g7757.t1.exon4;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 6771 6884 . + 0 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 7163 7229 . + . ID=g7757.t1.exon5;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 7163 7229 . + 0 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 7474 7722 . + . ID=g7757.t1.exon6;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 7474 7722 . + 2 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 8005 8188 . + . ID=g7757.t1.exon7;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 8005 8188 . + 2 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . exon 8366 8927 . + . ID=g7757.t1.exon8;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . CDS 8366 8648 . + 1 ID=cds.g7757.t1;Parent=g7757.t1 NODE_1139_length_13628_cov_42.2151 . three_prime_UTR 8649 8927 . + . ID=g7757.t1.utr3p1;Parent=g7757.t1 #PROT g7757.t1 g7757 MSICNSMAFTYECGHLAVATSKGLYLVDCRDELVRPIGPEFRGGGPRLVDVLHDYEYVVFTGDGGDSRFPPNKAVIWDERRRMIFAEIKTDSPVTAVKLSPAHLLVATETKIRVYSIRDKKLLLEIETALNTEGIVALSKNEQNPLVAFPRRQSGTVSVADIRRLAILCVISAHKTGIRKLSFDASAEIIATASERGTLIRLFESRTGIGLRELRRGSLGSRIDDISFSPDSLRVCVVGERGSATTVHLFTVGDDTVSNKRSPLYTMALKNYLPKHQRSEWSFVRYRLDGIAAICAIGGPGDGAVFVASRTGEFWRFNIDREGEGEERTMRRNPVFEFMKTLHISDPSPVDLSAPQHHRSEVAEAPEWDDD* # PASA_UPDATE: g11492.t1, single gene model update, valid-1, status:[pasa:asmbl_1340,status:12], valid-1 NODE_1364_length_11749_cov_40.7336 . gene 3041 6095 . + . ID=g11492;Name=g11492.t1 NODE_1364_length_11749_cov_40.7336 . mRNA 3041 6095 . + . ID=g11492.t1;Parent=g11492;Name=g11492.t1 NODE_1364_length_11749_cov_40.7336 . five_prime_UTR 3041 3146 . + . ID=g11492.t1.utr5p1;Parent=g11492.t1 NODE_1364_length_11749_cov_40.7336 . exon 3041 5364 . + . ID=g11492.t1.exon1;Parent=g11492.t1 NODE_1364_length_11749_cov_40.7336 . CDS 3147 5364 . + 0 ID=cds.g11492.t1;Parent=g11492.t1 NODE_1364_length_11749_cov_40.7336 . exon 5647 6095 . + . ID=g11492.t1.exon2;Parent=g11492.t1 NODE_1364_length_11749_cov_40.7336 . CDS 5647 6095 . + 2 ID=cds.g11492.t1;Parent=g11492.t1 #PROT g11492.t1 g11492 MSAHQSAGQSAASAPRQPQRVVHNLNGQPGVCHFFLNGGCQLGAGCAFAHAEPPRSTATPSAATPSAAVPVVASTLPTQASHTITAPQRRLPKKVPICRHFATSGCRFGSECKFSHDGDAAAAPSGGNPAAVSGQHQLPSQNNQRDGLRGNRGQASATALSAQADASRARGAVEGGGGALGAVLAGSQPGQAQRARQPRHGQQQSDGQRRAQSNQPGLDLPQQSGQRSQQQQQQHQHQHQHQHQHQHQHQHQHQHQHQQQNHQQRDRSTPSIARNGAATQIVPKDSTLAQASSKNGTPSVPVASDASVSTHTAGSPSDPSVAAPRVSMPTSRPAAPRPVASAAAMPPMQPVTLESELANVSRRYPQAEIAKRTAQTEASFTFAPSDPDWPFDVKNIRATLVFPETYPREPLSMYFVDDAMPEMFREHLNRAMRRHVTAEIARAGEGGLCAGVKYFFKWLDKGLQDYFLEAGRAMRAELELESKGVKFVSAAELKRQVEAGGARDDEEDEQDENGGDASDAGKEDASCTAAARINAPDDRGLQQQTPASMGRVKDDRHLIESVSSADEGGDSDAGPSGMASSSGTLFIDPASVRRGMEIRLGGVSLSNVSMVRARTLLLEVACQRCRERAEMRMRPGIPSSGECGRCSSEMSASFLPSAVHEFSSLLAVSEPQGCTLTQLIVPECELEVQCYNCSAEMGGKNMGTVGGVRSYKCTSCHQEMKVGIGSVQFHKVVPKDDESDARKGQKIPKRKVPNDPSIKPGFPLPEFGTCKHYKRSHRWLRFPCCNRAYACDMCHEANKPDGHEMMWASRMICGFCSKEQSYSNKPCSCGGELVGGTSAQGYWEGGQGCRNQLSMNRKDVHKYSNSKLKTHSKKSERVGPKQQQPKKE* # PASA_UPDATE: g11493.t1, single gene model update, valid-1, status:[pasa:asmbl_1341,status:12], valid-1 NODE_1364_length_11749_cov_40.7336 . gene 6437 8269 . - . ID=g11493;Name=g11493.t1 NODE_1364_length_11749_cov_40.7336 . mRNA 6437 8269 . - . ID=g11493.t1;Parent=g11493;Name=g11493.t1 NODE_1364_length_11749_cov_40.7336 . exon 6764 8269 . - . ID=g11493.t1.exon1;Parent=g11493.t1 NODE_1364_length_11749_cov_40.7336 . CDS 6764 8269 . - 0 ID=cds.g11493.t1;Parent=g11493.t1 NODE_1364_length_11749_cov_40.7336 . exon 6437 6547 . - . ID=g11493.t1.exon2;Parent=g11493.t1 NODE_1364_length_11749_cov_40.7336 . CDS 6437 6547 . - 0 ID=cds.g11493.t1;Parent=g11493.t1 #PROT g11493.t1 g11493 MQPIPEEKDARRTPPRRDLFDDQLLNSDDSIPWSVSPAASASSSPFQSPFVSGHTTPQQLRIRSRPPTPWQEGSQGEGSIDEMDVAYENEGLRPSVVTAQSNSNCAWEMSERGASMDLLPSEMIVSIFKYLALSELGTLARVCRKWREIAYSPYLNRVISVDVGDITCEELLAIRERRPSSVSFGSQSGVFVMRSILTNCADNIRRLDLSGAYHSVSNDVLCAISKHCVQLECLGVRWCANISDDGLRAVVEGCGNLRDIDLESCIKITDVGLLAIADNIGQRLNSLGIYACLRCTDRGVKAIALACPCLRFVNMSFCYLITDIGASFLADHCHDIECFRLAKRNGTYTTTLSTSPEAAHTTQLTQQEQPQPPQQQQQQQQRQLSMQQEQTDDLRPVMAPPVIGGMVAAARIGAYAQHHGALGRRAHMTPPARESDRLLLALARNCPRLRELDVTGSVGVSVAAACALADHCPELRLLDLSECFGVTDDVVLAIVQRCNRLEALHVNNCTRISPRSLFGLSEKCGGRIRQPVQRRTTQ* # PASA_UPDATE: g11494.t1, single gene model update, valid-1, status:[pasa:asmbl_1343,status:3], valid-1 NODE_1364_length_11749_cov_40.7336 . gene 8969 11331 . + . ID=g11494;Name=g11494.t1 NODE_1364_length_11749_cov_40.7336 . mRNA 8969 11331 . + . ID=g11494.t1;Parent=g11494;Name=g11494.t1 NODE_1364_length_11749_cov_40.7336 . five_prime_UTR 8969 9257 . + . ID=g11494.t1.utr5p1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 8969 9369 . + . ID=g11494.t1.exon1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 9258 9369 . + 0 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 9539 9622 . + . ID=g11494.t1.exon2;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 9539 9622 . + 2 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 9792 10094 . + . ID=g11494.t1.exon3;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 9792 10094 . + 2 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 10245 10351 . + . ID=g11494.t1.exon4;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 10245 10351 . + 2 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 10517 10610 . + . ID=g11494.t1.exon5;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 10517 10610 . + 0 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 10711 10848 . + . ID=g11494.t1.exon6;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 10711 10848 . + 2 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 10979 11102 . + . ID=g11494.t1.exon7;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 10979 11102 . + 2 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . exon 11213 11331 . + . ID=g11494.t1.exon8;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . CDS 11213 11297 . + 1 ID=cds.g11494.t1;Parent=g11494.t1 NODE_1364_length_11749_cov_40.7336 . three_prime_UTR 11298 11331 . + . ID=g11494.t1.utr3p1;Parent=g11494.t1 #PROT g11494.t1 g11494 MYGARHIGIAAAITWTCCLSIAVTLNAPASLNFRPIIGIPTQEMDNATMGAHYIAASYVKFVEQAGARVVPLHLDYDSATLNSLLDQINGVLIPGGHSVIDPETRIYKFSKQIVNYAIRANDNGDHFPVWGTCLGFELLATIMTDDSTILTRCSAENMAMSLEFTRQAPSSKLFRSAPSAVLEAFATRDITYNNHKFCITTKNFASHSLLPSLFNVLSTNIDPTGIEFVSTMEALQYPFFGIQWHAEKPQFEWNPTKGFDHSVAAVASMQYLANYFVNEARRNSHQFKTPELEFSALIYNDVPRLVHSYKMLDVFVQMYLWTKADARNRKVRGIEAMVAEGTRVSESA* # ORIGINAL: g2186.t1 original gene structure, not modified by PASA NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS gene 1055 4707 . - . ID=g2186;Name=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS mRNA 1055 4707 . - . ID=g2186.t1;Parent=g2186;Name=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 4553 4707 . - . ID=g2186.t1.exon1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 4553 4707 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 4205 4421 . - . ID=g2186.t1.exon2;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 4205 4421 . - 1 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 3559 4095 . - . ID=g2186.t1.exon3;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 3559 4095 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 3269 3358 . - . ID=g2186.t1.exon4;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 3269 3358 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 3007 3105 . - . ID=g2186.t1.exon5;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 3007 3105 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 2489 2623 . - . ID=g2186.t1.exon6;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 2489 2623 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 1624 1839 . - . ID=g2186.t1.exon7;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 1624 1839 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 1055 1489 . - . ID=g2186.t1.exon8;Parent=g2186.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 1055 1489 . - 0 ID=cds.g2186.t1;Parent=g2186.t1 #PROT g2186.t1 g2186 MQAAVGHPKRFLRSLKIMRFFLIIACTIVKACSRSMGGKWDELAAVIVAFKGTVLAFPLLQMLRINEDAVAELTTLMSMADSVVSILAGEPAFVSAFCGSGSSHSVSDRVGVLAQETLMRGMEEGRTLASCAVNLARLHGTLLLLSQLPDYPETVQLSLLECVAVDEDGKENDSPSAATHSGHRGLADVALSLADMCAPQMAAGVRVPLPVRQQQQQQQQQPLATLFASLYQFAAAVLSVYAGALPHSHRDGFELCLFRWLLGGKTVVSSLIAADVIVFIASGYGGGCPDTGILGIASLCFELIRSLPVRSMPHQRCASLLRRLASMCNTESLDILIATHDPTMSSPSAQAWSVVARGLPQGTRSKTAALDLFSELCAPENGGCDIALGRAIGLFDSALNACVASANNHAVAMFVQKTSECFRTLLQRTAHASKDIDVLARTAALCAFRTFGANTMHPRIVQSCVPDEQREEIIGFMSRATLANNGGALTDCNAFAAIASDLQLARIPRDTAAAAMRSRKRPSEEPHHAIDEHNTTPQPPHGATNPQKVVRGGDDDSPYDIAYGGLVAPAATDDANTQAEYKKAVDAMRQTVTLLSTATSAGLHPPQWALDELRTCAATLAQLLSSM* # ORIGINAL: g2185.t1 original gene structure, not modified by PASA NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS gene 57 952 . + . ID=g2185;Name=g2185.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS mRNA 57 952 . + . ID=g2185.t1;Parent=g2185;Name=g2185.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS exon 57 952 . + . ID=g2185.t1.exon1;Parent=g2185.t1 NODE_2893_length_4819_cov_49.4102_potentialcontaminant AUGUSTUS CDS 57 952 . + 2 ID=cds.g2185.t1;Parent=g2185.t1 #PROT g2185.t1 g2185 VTFRSYRDGKKILLTPESSVGAQKQIGADMIVPLDELPPHSMGRDALLASLERTHRWERRSLAAHIADPRGQAMYCVLHGGIERDLRAKSVRELCALPFEGIAIGGSVGGNRQEMAEMLAFLMPLVEDAARERRAIASDAAADALPTDVVHEKRPVHLLGMGDPESVQLGVVYGIDTFDSSYPTKAARHGTILLSDGSRKKITHAEYALPNVPLERGCNCAACAPRGTGRSTVDALCEEEVADMHAAGVPPTHSSAFLRHLMKAFEPTGMSLLSAHNLVALNRLFASMRRRIGRDEM* # ORIGINAL: g3045.t1 original gene structure, not modified by PASA NODE_6014_length_659_cov_41.2397_potentialcontaminant AUGUSTUS gene 101 623 . + . ID=g3045;Name=g3045.t1 NODE_6014_length_659_cov_41.2397_potentialcontaminant AUGUSTUS mRNA 101 623 . + . ID=g3045.t1;Parent=g3045;Name=g3045.t1 NODE_6014_length_659_cov_41.2397_potentialcontaminant AUGUSTUS exon 101 623 . + . ID=g3045.t1.exon1;Parent=g3045.t1 NODE_6014_length_659_cov_41.2397_potentialcontaminant AUGUSTUS CDS 101 623 . + 1 ID=cds.g3045.t1;Parent=g3045.t1 #PROT g3045.t1 g3045 YRRVLRKRIPCASNGELSTLLSRMWKIMPYTQKEEYRAIAERMREAAGMPPVIVVGNESRESPLEGRPEHQLPYTQKEEYGSRATPERMQPDAEMSHEIFVGRRCELGVEGTPTYQPSQGDASSTRTTSSTLPDAQAFDTGSNYGSIPMQIISAEHIVPGSNYWAWRVNVTLL* # ORIGINAL: g2815.t1 original gene structure, not modified by PASA NODE_7168_length_464_cov_39.946_potentialcontaminant AUGUSTUS gene 54 377 . + . ID=g2815;Name=g2815.t1 NODE_7168_length_464_cov_39.946_potentialcontaminant AUGUSTUS mRNA 54 377 . + . ID=g2815.t1;Parent=g2815;Name=g2815.t1 NODE_7168_length_464_cov_39.946_potentialcontaminant AUGUSTUS exon 54 377 . + . ID=g2815.t1.exon1;Parent=g2815.t1 NODE_7168_length_464_cov_39.946_potentialcontaminant AUGUSTUS CDS 54 377 . + 0 ID=cds.g2815.t1;Parent=g2815.t1 #PROT g2815.t1 g2815 LPHRGTDENMIEASKDKSYFMISKLDMPNSLVSHTNFKATQEIFKVERGKLTSVSKEMASFPGKFSLKFTSPGEYRIRYTVVQVPNGVLKPSSWPVEEICVRVRPGE* # ORIGINAL: g2148.t1 original gene structure, not modified by PASA NODE_3660_length_3000_cov_40.2626_potentialcontaminant AUGUSTUS gene 1529 2023 . + . ID=g2148;Name=g2148.t1 NODE_3660_length_3000_cov_40.2626_potentialcontaminant AUGUSTUS mRNA 1529 2023 . + . ID=g2148.t1;Parent=g2148;Name=g2148.t1 NODE_3660_length_3000_cov_40.2626_potentialcontaminant AUGUSTUS exon 1529 2023 . + . ID=g2148.t1.exon1;Parent=g2148.t1 NODE_3660_length_3000_cov_40.2626_potentialcontaminant AUGUSTUS CDS 1529 2023 . + 0 ID=cds.g2148.t1;Parent=g2148.t1 #PROT g2148.t1 g2148 MARAVWTPLCSHNFVTVTRDHHADALRQHALVGSVRDLRHVSASVNASTRSRLLHASARLLQGPPQDAGSPKDAKDVPLGQEKKYATHEFHAFQNELKRDPDTNEIFMSVFPRERVRNFSIIAHIDHGKSTLADRLLEFTRTIPVRTGNKQVLDKLQVERCVMA* # ORIGINAL: g586.t1 original gene structure, not modified by PASA NODE_3555_length_3213_cov_22.2862 AUGUSTUS gene 82 1021 . - . ID=g586;Name=g586.t1 NODE_3555_length_3213_cov_22.2862 AUGUSTUS mRNA 82 1021 . - . ID=g586.t1;Parent=g586;Name=g586.t1 NODE_3555_length_3213_cov_22.2862 AUGUSTUS exon 742 1021 . - . ID=g586.t1.exon1;Parent=g586.t1 NODE_3555_length_3213_cov_22.2862 AUGUSTUS CDS 742 1021 . - 0 ID=cds.g586.t1;Parent=g586.t1 NODE_3555_length_3213_cov_22.2862 AUGUSTUS exon 82 455 . - . ID=g586.t1.exon2;Parent=g586.t1 NODE_3555_length_3213_cov_22.2862 AUGUSTUS CDS 82 455 . - 2 ID=cds.g586.t1;Parent=g586.t1 #PROT g586.t1 g586 MNNRPAVTPEDHAKRLLGKSTSEKRYITAGERANIIAVIDSLLRDRQALEEVAKLLVKDLKTAKEAFFASSQRIRELEDVVIHLTTEQNGDKKSAASPPKREYQDFEKNQQFAEAYGRMEARITDFARSILSEVKCLGDVRQELAVHGEALARIENGVAKLDFRMTEQLHHHEHSLPERDSNAGNDDSYGDTEPLADAAGPDPVTEPAEENNYDSRP* # ORIGINAL: g6549.t1 original gene structure, not modified by PASA NODE_937_length_15724_cov_53.3675 AUGUSTUS gene 14409 15017 . + . ID=g6549;Name=g6549.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS mRNA 14409 15017 . + . ID=g6549.t1;Parent=g6549;Name=g6549.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 14409 14506 . + . ID=g6549.t1.exon1;Parent=g6549.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 14409 14506 . + 0 ID=cds.g6549.t1;Parent=g6549.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 14831 15017 . + . ID=g6549.t1.exon2;Parent=g6549.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 14831 15017 . + 1 ID=cds.g6549.t1;Parent=g6549.t1 #PROT g6549.t1 g6549 MEQDRKRLRLSIEPLIDRKIREIDANGEEKFDERLKPSERLFRTVQRIDFGDVVKAFVSEEDAAAGQQRDAPGHRQDGGHQPQDHLKNALDHLM* # PASA_UPDATE: g6547.t1, single gene model update, valid-1, status:[pasa:asmbl_10044,status:3], valid-1 NODE_937_length_15724_cov_53.3675 . gene 305 975 . + . ID=g6547;Name=g6547.t1 NODE_937_length_15724_cov_53.3675 . mRNA 305 975 . + . ID=g6547.t1;Parent=g6547;Name=g6547.t1 NODE_937_length_15724_cov_53.3675 . five_prime_UTR 305 394 . + . ID=g6547.t1.utr5p1;Parent=g6547.t1 NODE_937_length_15724_cov_53.3675 . exon 305 975 . + . ID=g6547.t1.exon1;Parent=g6547.t1 NODE_937_length_15724_cov_53.3675 . CDS 395 853 . + 0 ID=cds.g6547.t1;Parent=g6547.t1 NODE_937_length_15724_cov_53.3675 . three_prime_UTR 854 975 . + . ID=g6547.t1.utr3p1;Parent=g6547.t1 #PROT g6547.t1 g6547 MASAKVINFYSERAAYGCFSNFSRHPLRIEGKEWPTSEHFFQAMKFAGTVHEEEVRACPSPGEAAKLGRCRSLPLRKDWDSVKDDIMRAAVLAKFTQNEDIRSTLIETDGSKLVEHTRNDSYWGDGGDGSGRNMLGIILMETRDTLLGKTAR* # ORIGINAL: g6548.t1 original gene structure, not modified by PASA NODE_937_length_15724_cov_53.3675 AUGUSTUS gene 1604 13922 . + . ID=g6548;Name=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS mRNA 1604 13922 . + . ID=g6548.t1;Parent=g6548;Name=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 1604 1695 . + . ID=g6548.t1.exon1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 1604 1695 . + 0 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 1795 2317 . + . ID=g6548.t1.exon2;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 1795 2317 . + 1 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 2513 2703 . + . ID=g6548.t1.exon3;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 2513 2703 . + 0 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 3043 3101 . + . ID=g6548.t1.exon4;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 3043 3101 . + 1 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 3523 3618 . + . ID=g6548.t1.exon5;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 3523 3618 . + 2 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 3789 3881 . + . ID=g6548.t1.exon6;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 3789 3881 . + 2 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 4098 4426 . + . ID=g6548.t1.exon7;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 4098 4426 . + 2 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 4932 5303 . + . ID=g6548.t1.exon8;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 4932 5303 . + 0 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 5572 10403 . + . ID=g6548.t1.exon9;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 5572 10403 . + 0 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 10617 10914 . + . ID=g6548.t1.exon10;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 10617 10914 . + 1 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 11153 12950 . + . ID=g6548.t1.exon11;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 11153 12950 . + 0 ID=cds.g6548.t1;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS exon 13315 13922 . + . ID=g6548.t1.exon12;Parent=g6548.t1 NODE_937_length_15724_cov_53.3675 AUGUSTUS CDS 13315 13922 . + 2 ID=cds.g6548.t1;Parent=g6548.t1 #PROT g6548.t1 g6548 MIPTGYVNIGDQVLIFADLQEKPRGYLNAKGMIDKLCGLSLSSCSSGPSDVRGSLFRLYPMQRYSAEKALEKARDRRHSRQMMGGRESTVDVDASFAGGFRKAREAGDSGLSGSQTNISKLTALADAERRQNRREYARVAGSPVRYGQVLQLLHVKSGKFVTVQKKIAAYAEKQSMMVSLDDGSEWSWFTIVPFYKLRSEGDYVQVGDQVVLRATKSVVTSLHAGLLPLFDGRIEVNGSSQRTAWTLDPCVPFTMDGKGSLRSGDVVRLYHTETERYLLCETRENDAVEVGLGQQDMHGKALPSTNALFEIQAISDLTDLAGIGEWEHLYRLKHLGTGKYVSFSVQTGRPRGGSVAEENYRDEDMVDVGMDMGDTAHPLSSSRSPSLVQTDASEGVEPQSASGHENDASTHAPTAAADADKTVTTGTSSPPMTPFPLNTERLVAMDCPPDDSTLFVMIPTTAAADRTVGRSSCVRFQHFVTRRFVMASHCAVQSAVGDADRQRRGDTLKSISRVNAATVSASSSSDTYAQGGKATEEGHGPLPLLCLESLSLSEAFMIYPTSESDTRTVDYAIELRHQLLLFSAKARKAKPPLNFHQRQEISRLRGVLRDLIYFLTDVTSGDPFTEKFVPNKANQTLVREQLVLSSVFAVIESPFIEFGGTLISLDDAQLDDYADLRIVMRLCYQAVKVACAGSRVNEQYVSQWIPTMQMQMTHHFYAESCLTSLLDQNRQLLETMIHEDSVIRFVELLRVHKDPSYFRFLRALCSVNGRAVARNQEMVSSRLFGDTSGSILLDIGKRSDGTVTIKFGDAVSCIKVTIDAYLCLRPPDIDFDAADYLEEQLLLYDELCLDRNYIAINKLRETLTRDIILQCIRLPTLPHRIRAAFSGLFVTMYIDCDPFEAQTPVQLVRLWTELDGETTVDGIIRKGNAPARALFEKAGNAGGVMVDIATVQKVILDVLVDALAAEAASASTAETRAGQRPSHRDALHDLQATRMCFVASILHLVFNLSRFGLYTYTELQSLVPSLLGILRAREIPAGRKRARSYSEGIGEDAFVHSGVVREDKSAEAGEGETLGMGGGDSGEAGSQDATDSGQSDVIKAKVKACDVLMLMCDWAINARVTLLLNAFKRLVPDCLLATVDAAWPGDELSEDIATTSLPSLRAAVDRLVVPVDKLVDTDPVALSFSTLRLRKLLDFVDRALGEGALTKEKVADIRGEVVTALDTQGRALDERRPLFRHVTPPAGEQQISHSTAKRINQEEQEKFVGELFRIVNEGAAFNIDEKDGEELVPVALTLAHSDYPPLALRAVRILYLQFNQRARLLGVATKVQLIVAQEGVEAYQMARTLLDGVRQERDRAELWISNNSAVARQQCERLVDSLNSMRDFCDMNNRSVLAKKQRLLRNLNAHSDVIGVLLLPVTRAGDEGLLRAAAAAHGFLQAFCADNAENQRLLWDCVDIFSTQLQDVPAACDTVVAVVRNNANICSAVRERLVRDFVRMIEVDQPNPCFLSFFNAIVTTSGDRPIKRNQIMCLHGFMASETLIARVREDMSRVADTQGDAGENPSSSPSTMTPSPRKTTEHRWANGVWGKFAFHFAFVELLSRCCLGKISEVEILCQSLMNIRELSAAISRKDMPYDGRAAYLLYLTEAYVFCEIEVKGIETNRDLWDLFAKLVPEMEETASEHTPHASLRRFVWAAVVCVLRFFTTFTGPTHTDSRFQTVIRLEAAVRALAAAEWPGTAERFSIEACARVLKSSIMGVPSARKSSVSAFDGGQGGDEVRWIQQQQQQQQQQQQQQQQPLVGDFRSIVIPPSGLYPSSIGIAVRQKSSFFASDRMSLDYEDAITRSFEHAMGLLSVVMRPFIEAEFAVLVELIDTSDRRISLALDDRHCGAHIATAAAEEAHMALFGHSHGISNSNNNAKEGGEGGSVESGADSRAPASPGDNFAAARGKSFLSCLYDHCRRLAEMNHPLQAMLCARILVSCQRFALKNFSFLTKATADKTTPYLAYETCCNKHGITPLPRPTSSSPRVAADGSSITPDPRVPDTLAKARELGRACRVAEALAHRQRRLIATGAPQLIVWLLRHVQDREILLQGMRLANAILLGGNSEGQTAFYDLLRANVAGGSDVHGAADAKSGEAHAHTSAHAGRVDSGFLEGARSVLVDLMADVRTSRLVMGKAKKEVGSASGIPTASLSVEDTSSEKVQAIDVMQLATELLRFFQLLCEGHNLKMQDVLREQAGTTRSCNLVAETLNFFEVVCGSSSTVDFWITPANAACVEQCLDTIAEFCQGPCPGNQLCVVQHSDACLEIIVALVTHDLHTLAADEPATVLRIRRKAIAVLLACIESTTDLQLIELILANFDTGVVVGILKEMYATYLRLCASAESSGGATCGISRVAESVRSSPVQKPRASIPSVYSLDLGANSTDEDDADLCSSSADVLFEAAQALYVLCLTLAPYEPKLQAALRADAIKPLVSSVTPLSRAAGAHTPAGDGVIPVPGPDAMSHFAATTATIEIVRDERLERVSFPIPTVCHLLTKSTRDLIVRTCVSKDHRERLENFFWCAGILQSEMEWRASLRDKPLLWLFNRQMERLGNLAFYSAFLMNFIVILFYPLDGWSTPQSGGGGADAGGAAAPARGEYLDLFGPVDLTPLFATMLLKLLGYFQVVAAIVILGEHVHMTRALKQSNEISVWFAQNDVTQRHAKEASEGFTEFSRRRTLYHTGYFLCAVAGLAFSPYFYCVLLFDIIARSDILQNVIRSVTHNWRAFALTSLFTLIVLYAFAIVGQVFLPGDFVINGEERCRSLLMCTVTAINEGLRSGGGIGDVLRPSSVTDSIFHWRLLYDVSFFFVVIVIVMNILSGIIIDTFADLRTERAELDSVLRNECFVCGIDRATFDRESNGFAPHISRGGEHNMWAYIFFIVYIRTKESTDLTGPEQFVNRLVAEGNIDWIPQHRALSLQMNAAALLHADAPNDDRKPSSSRQRDVGASGSAAAQASAIAESASPALAALTSSALDDMRREIRELRQLVVEQHDLLVSMTTRSLPRTSVSVGGRRVSSEFPLNSSMSQSQSQMGKGRTVGWGAVTTMLRRNVAAAAFNPEKK* # ORIGINAL: g8776.t1 original gene structure, not modified by PASA NODE_1970_length_8286_cov_38.9878 AUGUSTUS gene 5250 7898 . + . ID=g8776;Name=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS mRNA 5250 7898 . + . ID=g8776.t1;Parent=g8776;Name=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 5250 5327 . + . ID=g8776.t1.exon1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 5250 5327 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 5477 5638 . + . ID=g8776.t1.exon2;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 5477 5638 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 5925 6037 . + . ID=g8776.t1.exon3;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 5925 6037 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 6196 6316 . + . ID=g8776.t1.exon4;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 6196 6316 . + 1 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 6635 6714 . + . ID=g8776.t1.exon5;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 6635 6714 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 6957 7062 . + . ID=g8776.t1.exon6;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 6957 7062 . + 1 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 7259 7342 . + . ID=g8776.t1.exon7;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 7259 7342 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS exon 7752 7898 . + . ID=g8776.t1.exon8;Parent=g8776.t1 NODE_1970_length_8286_cov_38.9878 AUGUSTUS CDS 7752 7898 . + 0 ID=cds.g8776.t1;Parent=g8776.t1 #PROT g8776.t1 g8776 MARTRDDPVRVERVHVDGLRVTKSDVVARAALPLFEAETLGSLVETARAACLRLEKLGIFKTVEMVLDTTTKSDDGKALEVLVRVEEKRRLEARTGTTVGQNEGALQLALDLRNVNGRGEMISANYSKGTRTTSAYHVTFSKPISGDPDKSLVVVAHKSTQNLLTINSHNEISQGLSVAFNFLTRYGRHSFSFDPVWREIVNVAPTASFAVRQQAGHSLKTAFKHTFLTDTRDDTMLPLNGTYFKAVQSFQLSMRGGLMYPLMGARTHLSDRFFLGGPLNIRGFPMKSVGPREKGV* # PASA_UPDATE: g8775.t1, single gene model update, valid-1, status:[pasa:asmbl_3142,status:3], valid-1 NODE_1970_length_8286_cov_38.9878 . gene 1228 3510 . - . ID=g8775;Name=g8775.t1 NODE_1970_length_8286_cov_38.9878 . mRNA 1228 3510 . - . ID=g8775.t1;Parent=g8775;Name=g8775.t1 NODE_1970_length_8286_cov_38.9878 . five_prime_UTR 3439 3510 . - . ID=g8775.t1.utr5p1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . exon 3096 3510 . - . ID=g8775.t1.exon1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . CDS 3096 3438 . - 0 ID=cds.g8775.t1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . exon 2620 2869 . - . ID=g8775.t1.exon2;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . CDS 2620 2869 . - 2 ID=cds.g8775.t1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . exon 2294 2497 . - . ID=g8775.t1.exon3;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . CDS 2294 2497 . - 1 ID=cds.g8775.t1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . exon 1228 1996 . - . ID=g8775.t1.exon4;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . CDS 1426 1996 . - 1 ID=cds.g8775.t1;Parent=g8775.t1 NODE_1970_length_8286_cov_38.9878 . three_prime_UTR 1228 1425 . - . ID=g8775.t1.utr3p1;Parent=g8775.t1 #PROT g8775.t1 g8775 MEAELADEEGSSDSDYITANSSDDSSVGDDVAQRAHHAVHTDNIGDEEEQGGDTDGDGDWASDESDLDFILHDPPPATERDDNEMHFDPRIASTHSYLGRLRDVSNRFQEPLFPGSRARLVLLAGGRFNAGLVLYPGHTIPLRLECARFHRIVSEAIESSTAGFGFLSCAMVGEDMRAVGKVGTTAIVQYVKMDDGTNSIDVVIRGEQRFRVLSVRHVGDYDVADVEVLPGDLPFLPPTVDAHSKRWLSPGYSGKRLPLCATAVPWFAFRQCDSRRLMATAMRLRPFVLASTPDDLSGDPERYSWWLASNITATPKLAQQLLNAATTAERLRLEIDHLAQFDRLCCTACTKTVAMQSCVFSMSSGGPMGAYVNPGGVVHETLTVTDVPRDAVRLVGRPSTESSWFPGYAWTVAVCGRCFAHLGWRFTAVERLSPRSFYGLTRTAVVPRPWSASED* # PASA_UPDATE: g8774.t1, single gene model update, valid-1, status:[pasa:asmbl_3141,status:12], valid-1 NODE_1970_length_8286_cov_38.9878 . gene 341 1195 . + . ID=g8774;Name=g8774.t1 NODE_1970_length_8286_cov_38.9878 . mRNA 341 1195 . + . ID=g8774.t1;Parent=g8774;Name=g8774.t1 NODE_1970_length_8286_cov_38.9878 . exon 341 507 . + . ID=g8774.t1.exon1;Parent=g8774.t1 NODE_1970_length_8286_cov_38.9878 . CDS 341 507 . + 0 ID=cds.g8774.t1;Parent=g8774.t1;5_prime_partial=true NODE_1970_length_8286_cov_38.9878 . exon 621 723 . + . ID=g8774.t1.exon2;Parent=g8774.t1 NODE_1970_length_8286_cov_38.9878 . CDS 621 723 . + 1 ID=cds.g8774.t1;Parent=g8774.t1 NODE_1970_length_8286_cov_38.9878 . exon 983 1195 . + . ID=g8774.t1.exon3;Parent=g8774.t1 NODE_1970_length_8286_cov_38.9878 . CDS 983 1114 . + 0 ID=cds.g8774.t1;Parent=g8774.t1 NODE_1970_length_8286_cov_38.9878 . three_prime_UTR 1115 1195 . + . ID=g8774.t1.utr3p1;Parent=g8774.t1 #PROT g8774.t1 g8774 ANVIFPDTSLPLEACVQKYSKAIHALYESRGVPDVLTLGMGPDGHIASLFPPLEPKSYGPDDVIHTTTTAFAVFDRISLSFGPILAARRHVFFMKGADKDAVWKEMLASDADEKRWPAKAVLRKGRTTMIAQL* # PASA_UPDATE: g2719.t1, single gene model update, valid-1, status:[pasa:asmbl_7293,status:12], valid-1 NODE_4409_length_1659_cov_50.0789_potentialcontaminant . gene 1 1274 . - . ID=g2719;Name=g2719.t1 NODE_4409_length_1659_cov_50.0789_potentialcontaminant . mRNA 1 1274 . - . ID=g2719.t1;Parent=g2719;Name=g2719.t1 NODE_4409_length_1659_cov_50.0789_potentialcontaminant . five_prime_UTR 1124 1274 . - . ID=g2719.t1.utr5p1;Parent=g2719.t1 NODE_4409_length_1659_cov_50.0789_potentialcontaminant . exon 1 1274 . - . ID=g2719.t1.exon1;Parent=g2719.t1 NODE_4409_length_1659_cov_50.0789_potentialcontaminant . CDS 1 1123 . - 0 ID=cds.g2719.t1;Parent=g2719.t1;3_prime_partial=true #PROT g2719.t1 g2719 MAVRSGRLMARIAVVAAVAIALFTIMRSSPAPPQCPADGRGVEKAVYESPAYDRNEVERGAHEAEPSPKLPEKDVVAVEVDEVAADPMRIAPLSAAPVRTRHFEGSNMLSRVRIAVADSLNDDSRERCFAVTAASLFPFAFEHIEGKDDGSHVSEWMQNEYCQPHVRYTQPKFVLIVATCVHIPKPLNGFAQAAVVAARDMEAVGAAAAGDIRLSVGVPEGTPYIHPGVLVIDTHKYFEFGCPDMGPFNATAKASLQQPLPHFTYSSGNQTTAGSLRRRFVAHRPDLWFVKDGTPRFMTNFFAVMMARNGIAITLPAVLTSIPRRIAPATDDVRALCGESQMCLYITQRAISADGVIAAMNDELRANFPYSASR # PASA_UPDATE: g3690.t1, single gene model update, valid-1, status:[pasa:asmbl_5110,status:12],[pasa:asmbl_5111,status:12],[pasa:asmbl_5112,status:12],[pasa:asmbl_5113,status:12], valid-1 NODE_2846_length_4989_cov_70.9184 . gene 98 4772 . + . ID=g3690;Name=g3690.t1 NODE_2846_length_4989_cov_70.9184 . mRNA 98 4772 . + . ID=g3690.t1;Parent=g3690;Name=g3690.t1 NODE_2846_length_4989_cov_70.9184 . five_prime_UTR 98 99 . + . ID=g3690.t1.utr5p1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 98 281 . + . ID=g3690.t1.exon1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 100 281 . + 0 ID=cds.g3690.t1;Parent=g3690.t1;5_prime_partial=true NODE_2846_length_4989_cov_70.9184 . exon 500 1020 . + . ID=g3690.t1.exon2;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 500 1020 . + 1 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 1225 1626 . + . ID=g3690.t1.exon3;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 1225 1626 . + 2 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 1883 2302 . + . ID=g3690.t1.exon4;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 1883 2302 . + 2 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 2676 3313 . + . ID=g3690.t1.exon5;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 2676 3313 . + 2 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 3453 3626 . + . ID=g3690.t1.exon6;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 3453 3626 . + 0 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 3929 4048 . + . ID=g3690.t1.exon7;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 3929 4048 . + 0 ID=cds.g3690.t1;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . exon 4503 4772 . + . ID=g3690.t1.exon8;Parent=g3690.t1 NODE_2846_length_4989_cov_70.9184 . CDS 4503 4772 . + 0 ID=cds.g3690.t1;Parent=g3690.t1 #PROT g3690.t1 g3690 FGKGYYAQRIAADSPVVPFDPSLVGTLLNTVALILGNGLTQVSSVMADTTAGGLQFGIGVSASAKPILLYGSGTSVDGWMVARQPSSGDATSSARVCTDNLFFRIYIDNNDAVSFKLRLKILSADSTTPEVTSQDVYTYGELLHFAYTWSSIDNIPRLYVNGELKALVSDRVIAPPGLTNTLTFSLGDSEPLPLGLPLGILRPVATYSGVYVYNYAMGPEMIQDRYRLGSGMANESTCSPTTTSISGLNCATALGTGDATAFLASFLDDGTPVERVGEFMTIGAKNPVASNELGLPFLLGTTTHAFCAKAKRGVSIDVVEDVSGNVLRGTVLQQATGGTTVVLSTDRMNCVRAADTTNDVMALTMRTKGKCASAVLDPTTFTACPFEGESFSGRYILRNRRTTNCSITFSSSGSLTTANMAVSAMGVFPGFEASFTIGCPAIMNSSSIANAYIQYTKGPSSLTGDAIVTVSGTRLRLATAYPGTCASLNASYLDTVYADGLFAFDGVKAFPCTGQSPITIQSAADLNGADVCDILPPLIFSSYSDHAIPTLRATKIASITFITANSSLVDIRGLASVVLIDGALSVEGVLIPPLDQLKSLTSISGLFSIRASSNESAKPSNSSSVRVPPALRSVGGIELSLIGDINAMDSLVTIGSLGLTVKTTLISRLPLKNLVSIAGPVVISSNSVIRSLPDTPSLVRFGAALTVAGNAIMCVSDKNRIIALAYQPGVNIVDTLPANATECIVNKLGEATAAPATPSDVKDMLTNVNSVLGDKSWSKNNIVPPKEAAKTMLSSLSDGMTLIRKPKFFEAQVDLSVSDAATQMMTSINTLLNADNLPVLRNNSLSSTLVTLAEELGFAIAGSNSSCTSRSSVELSTNWLHVVPSKGKRRSDFEYLFWRTEEWFAHNR* # PASA_UPDATE: g1267.t1, single gene model update, valid-1, status:[pasa:asmbl_8288,status:12], valid-1 NODE_579_length_20840_cov_43.8575 . gene 12237 12967 . + . ID=g1267;Name=g1267.t1 NODE_579_length_20840_cov_43.8575 . mRNA 12237 12967 . + . ID=g1267.t1;Parent=g1267;Name=g1267.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 12237 12267 . + . ID=g1267.t1.utr5p1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . exon 12237 12330 . + . ID=g1267.t1.exon1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . CDS 12268 12330 . + 0 ID=cds.g1267.t1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . exon 12442 12483 . + . ID=g1267.t1.exon2;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . CDS 12442 12483 . + 0 ID=cds.g1267.t1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . exon 12581 12633 . + . ID=g1267.t1.exon3;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . CDS 12581 12633 . + 0 ID=cds.g1267.t1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . exon 12731 12785 . + . ID=g1267.t1.exon4;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . CDS 12731 12785 . + 1 ID=cds.g1267.t1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . exon 12872 12967 . + . ID=g1267.t1.exon5;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . CDS 12872 12916 . + 0 ID=cds.g1267.t1;Parent=g1267.t1 NODE_579_length_20840_cov_43.8575 . three_prime_UTR 12917 12967 . + . ID=g1267.t1.utr3p1;Parent=g1267.t1 #PROT g1267.t1 g1267 MAVTAEALAARLRDALTAEHVEVFDASGGCGGKFEALVVSSVFEGKTLLQRHRIVNAAISEELKSIHAFSQKTLTPAQWKNAATQ* # PASA_UPDATE: g1270.t1, single gene model update, valid-1, status:[pasa:asmbl_8291,status:3], valid-1 NODE_579_length_20840_cov_43.8575 . gene 18640 20157 . + . ID=g1270;Name=g1270.t1 NODE_579_length_20840_cov_43.8575 . mRNA 18640 20157 . + . ID=g1270.t1;Parent=g1270;Name=g1270.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 18640 18875 . + . ID=g1270.t1.utr5p1;Parent=g1270.t1 NODE_579_length_20840_cov_43.8575 . exon 18640 20157 . + . ID=g1270.t1.exon1;Parent=g1270.t1 NODE_579_length_20840_cov_43.8575 . CDS 18876 20030 . + 0 ID=cds.g1270.t1;Parent=g1270.t1 NODE_579_length_20840_cov_43.8575 . three_prime_UTR 20031 20157 . + . ID=g1270.t1.utr3p1;Parent=g1270.t1 #PROT g1270.t1 g1270 MDDTMLKLLAAMPDFTGAQLQHLPNPVQPMDAHAAPSANTRDGAFVSRAAFDALFPGVFGLAGAMHAHGPHPHDDACPWATFDLNLVSPTLHAFGIDDPTLSSLTDSSLACLYGAPCPMPLLPDDMCLDGASPIPTAVMVSACAAQPHPHQHSARTTCPILPRVAPRTISSAQTQLAAKSNYEKIAAQLDRRLQPSHSQQPWPLPPGDGSPCAGNEPAIAPVDAEEDNADDALDGTGPSGSADDASDGITFSAELVDSVRARRSMHTTTERARRASLRAGFDDLQSVVPKSQRSLVGKDGRMGGSGAGKGKCARASKASLLSDAAGLIRSLRAQLDGAQVRVRSLEAENEELRHALARMTGGIIKHVQSAHCVGPSDDERKSTL* # PASA_UPDATE: g1264.t1, single gene model update, valid-1, status:[pasa:asmbl_8283,status:3], valid-1 # PASA_UPDATE: g1264.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8285,status:3], valid-1 # PASA_UPDATE: g1264.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8284,status:3], valid-1 NODE_579_length_20840_cov_43.8575 . gene 6688 8872 . - . ID=g1264;Name=g1264.t1 NODE_579_length_20840_cov_43.8575 . mRNA 6688 8872 . - . ID=g1264.t1;Parent=g1264;Name=g1264.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 8634 8872 . - . ID=g1264.t1.utr5p1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 8575 8872 . - . ID=g1264.t1.exon1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 8575 8633 . - 0 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 8206 8491 . - . ID=g1264.t1.exon2;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 8206 8491 . - 1 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 7971 8105 . - . ID=g1264.t1.exon3;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 7971 8105 . - 0 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 7700 7832 . - . ID=g1264.t1.exon4;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 7700 7832 . - 0 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 7513 7594 . - . ID=g1264.t1.exon5;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 7513 7594 . - 2 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 7294 7378 . - . ID=g1264.t1.exon6;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 7294 7378 . - 1 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 7064 7189 . - . ID=g1264.t1.exon7;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 7064 7189 . - 0 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . exon 6688 6950 . - . ID=g1264.t1.exon8;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . CDS 6858 6950 . - 0 ID=cds.g1264.t1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . three_prime_UTR 6688 6857 . - . ID=g1264.t1.utr3p1;Parent=g1264.t1 NODE_579_length_20840_cov_43.8575 . mRNA 6688 8872 . - . ID=g1264.t1.1.5b6be70c;Parent=g1264;Name=g1264.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 8575 8872 . - . ID=g1264.t1.1.5b6be70c.utr5p1;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . five_prime_UTR 8199 8491 . - . ID=g1264.t1.1.5b6be70c.utr5p2;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 8575 8872 . - . ID=g1264.t1.1.5b6be70c.exon1;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7971 8491 . - . ID=g1264.t1.1.5b6be70c.exon2;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7971 8198 . - 0 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7700 7832 . - . ID=g1264.t1.1.5b6be70c.exon3;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7700 7832 . - 0 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7513 7594 . - . ID=g1264.t1.1.5b6be70c.exon4;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7513 7594 . - 2 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7294 7378 . - . ID=g1264.t1.1.5b6be70c.exon5;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7294 7378 . - 1 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7064 7189 . - . ID=g1264.t1.1.5b6be70c.exon6;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7064 7189 . - 0 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 6688 6950 . - . ID=g1264.t1.1.5b6be70c.exon7;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 6858 6950 . - 0 ID=cds.g1264.t1.1.5b6be70c;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . three_prime_UTR 6688 6857 . - . ID=g1264.t1.1.5b6be70c.utr3p1;Parent=g1264.t1.1.5b6be70c NODE_579_length_20840_cov_43.8575 . mRNA 6688 8872 . - . ID=g1264.t1.2.5b6be70c;Parent=g1264;Name=g1264.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 8634 8872 . - . ID=g1264.t1.2.5b6be70c.utr5p1;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 8575 8872 . - . ID=g1264.t1.2.5b6be70c.exon1;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 8575 8633 . - 0 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 8206 8491 . - . ID=g1264.t1.2.5b6be70c.exon2;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 8206 8491 . - 1 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7971 8105 . - . ID=g1264.t1.2.5b6be70c.exon3;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7971 8105 . - 0 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7700 7832 . - . ID=g1264.t1.2.5b6be70c.exon4;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7700 7832 . - 0 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7513 7594 . - . ID=g1264.t1.2.5b6be70c.exon5;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7513 7594 . - 2 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 7064 7189 . - . ID=g1264.t1.2.5b6be70c.exon6;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . CDS 7111 7189 . - 1 ID=cds.g1264.t1.2.5b6be70c;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . exon 6688 6950 . - . ID=g1264.t1.2.5b6be70c.exon7;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . three_prime_UTR 7064 7110 . - . ID=g1264.t1.2.5b6be70c.utr3p1;Parent=g1264.t1.2.5b6be70c NODE_579_length_20840_cov_43.8575 . three_prime_UTR 6688 6950 . - . ID=g1264.t1.2.5b6be70c.utr3p2;Parent=g1264.t1.2.5b6be70c #PROT g1264.t1 g1264 MRVRLNCAAVGRGLWASIPRVTQRVSAPRGSWASTESPARDWNMSRIGVRRMSVCDTTVVEGTTDIALPAMAVTCHLNDGETRTALLLRLFACWESGETANEGDVAMFCTLTTLELERLERTFLALADNTVFVACKLLGQCGSVGVLQCIAFARHLLLPKLLALGLAQRPVPRQLAASVAALTVHPRAVVEGIFLPILDALSEVDTNVGTADVLVKLSGDLLPSAVPGHFLRHVAELGRMRDVVRNELLWPLVQVIVESAATLDDGTFAAFIGSLQTVPASAHASLKFASLVAAVMKRRGLQAALHREALVDVASKNATYMRRTLVSMAGRL* #PROT g1264.t1.1.5b6be70c g1264 MSNKSLLIWNWPQVLMQRTLRCLCVFFPPPQLERLERTFLALADNTVFVACKLLGQCGSVGVLQCIAFARHLLLPKLLALGLAQRPVPRQLAASVAALTVHPRAVVEGIFLPILDALSEVDTNVGTADVLVKLSGDLLPSAVPGHFLRHVAELGRMRDVVRNELLWPLVQVIVESAATLDDGTFAAFIGSLQTVPASAHASLKFASLVAAVMKRRGLQAALHREALVDVASKNATYMRRTLVSMAGRL* #PROT g1264.t1.2.5b6be70c g1264 MRVRLNCAAVGRGLWASIPRVTQRVSAPRGSWASTESPARDWNMSRIGVRRMSVCDTTVVEGTTDIALPAMAVTCHLNDGETRTALLLRLFACWESGETANEGDVAMFCTLTTLELERLERTFLALADNTVFVACKLLGQCGSVGVLQCIAFARHLLLPKLLALGLAQRPVPRQLAASVAALTVHPRAVVEGIFLPILDALSEVDTNVGTADVLVKLSGDLLPSAVPGHFLRPRLMMGLSRHLLGASRRCLHLLMHR* # ORIGINAL: g1261.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 203 892 . + . ID=g1261;Name=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 203 892 . + . ID=g1261.t1;Parent=g1261;Name=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 203 322 . + . ID=g1261.t1.exon1;Parent=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 203 322 . + 0 ID=cds.g1261.t1;Parent=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 450 580 . + . ID=g1261.t1.exon2;Parent=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 450 580 . + 0 ID=cds.g1261.t1;Parent=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 676 892 . + . ID=g1261.t1.exon3;Parent=g1261.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 676 892 . + 1 ID=cds.g1261.t1;Parent=g1261.t1 #PROT g1261.t1 g1261 RIVAAPGTPQRSRVSAIAQMYCDARLACRLPSKVFVPAPKVDAAAVILVPKRIISPELADFTSTETVMRGLFSFRRKTLRNSASALFPDAAVADAFLARASLNPSQRAQSLDNDSLMRAVAAYIAMKKTCGPGEWEMSPPNADKVADKVADKVAT* # ORIGINAL: g1262.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 930 2051 . - . ID=g1262;Name=g1262.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 930 2051 . - . ID=g1262.t1;Parent=g1262;Name=g1262.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 930 2051 . - . ID=g1262.t1.exon1;Parent=g1262.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 930 2051 . - 0 ID=cds.g1262.t1;Parent=g1262.t1 #PROT g1262.t1 g1262 MSLKKEIVSRPLGGAISLTDNESSKEIPPAKVLDEDEFVNRMERIIERDFFPDLPKLRAQRETELFLDTRDPAPQQHCEDGSLDTFLYSNTSEDNESFNKIMDKTRERHRRRYAWVFDSETKQLQLAAQPASEVSRRAGAPDPWGYRVHNLLMYYPEGTSPSTIGVREGEGRSVSHVNTRVPREILLKHAERPWKESAPPVVTAEAEAPVGDAGGAYTYLATPVIAPGVDASPLMTWGNIASTPVRLDADAVVTATPGPAFRMPDVSRREQIGIALSERASQRHRVRRTGGATPNIARFESPRNSPFGSGGRSRMTPAAVQMSPAARRLVGMAASGVGKKSDVDVSLRASYGGSTPSASVSAAGTPASHAGRA* # ORIGINAL: g1265.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 9121 10850 . + . ID=g1265;Name=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 9121 10850 . + . ID=g1265.t1;Parent=g1265;Name=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 9121 9195 . + . ID=g1265.t1.exon1;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 9121 9195 . + 0 ID=cds.g1265.t1;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 9275 9342 . + . ID=g1265.t1.exon2;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 9275 9342 . + 0 ID=cds.g1265.t1;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 9434 10167 . + . ID=g1265.t1.exon3;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 9434 10167 . + 1 ID=cds.g1265.t1;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 10315 10850 . + . ID=g1265.t1.exon4;Parent=g1265.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 10315 10850 . + 2 ID=cds.g1265.t1;Parent=g1265.t1 #PROT g1265.t1 g1265 MIIPVFDLAQDDEFVTVIIHAPHVKAQDVDFYVVDKEFKFTLPPYFLKLEFPGSLIEDGREHAEYRVDSGDVVVRLPKLVRGEHFADLDLLASLHAPTRRTTTSRPLIEVISSTEILENGAGVDGTGAPSAEPDAYGVRFARALDPEFGWQLPADEFRPATDTLLGRHGYGFDGQHGGFLGNLQRDMRDIVDIEAPEAMSPVERRSARILAEDTQFDEEHYMADFVCDEEIRRLIAFESRAERQLRKLSGADVGDAGDPGQGDAAAGAGGLRVQVKLSDEDRDDMRKLPRKEYIVNDERTVYLGLVDLLFSHAYDHRTTEGDPSVESAWTIAKVSPTLSHLDRFDSIGDVAVACVRRALCFPLYRHFDLCSRILRDVVCALKLGRRGVLQRLLETRRILAQDDSKRVLCSLYLDDYCVWIQLAREDTLASLAVALADVCASLGKGDVGWDLVLLEQAATAAAEEEPEAPQ* # ORIGINAL: g1263.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 4802 6844 . + . ID=g1263;Name=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 4802 6844 . + . ID=g1263.t1;Parent=g1263;Name=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 4802 4915 . + . ID=g1263.t1.exon1;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 4802 4915 . + 0 ID=cds.g1263.t1;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 5055 5211 . + . ID=g1263.t1.exon2;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 5055 5211 . + 0 ID=cds.g1263.t1;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 5302 6272 . + . ID=g1263.t1.exon3;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 5302 6272 . + 2 ID=cds.g1263.t1;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 6367 6468 . + . ID=g1263.t1.exon4;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 6367 6468 . + 0 ID=cds.g1263.t1;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 6746 6844 . + . ID=g1263.t1.exon5;Parent=g1263.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 6746 6844 . + 0 ID=cds.g1263.t1;Parent=g1263.t1 #PROT g1263.t1 g1263 METMPLVGHRAYYRAMWNEHDPPEFDLRWNVPVDLLSHELSVAVPIVNLSANASMRGPVRGRVVSKSQLVFFGRPADSREKSPYQFYMDIDDGSGQIPVVVWNTSVPRYYSSISVGDAVEISGFKIKRALRQDTRWELSVNPENPSGSIRLLSGVPAAALPQRPTAHRLCAHIALVPDGTITDVVGVVSFSGRVQRERLTGPSHGFAEYRWIQIVDGSHPKPIAMKVYSCSQPLLFAQIRRGVVFGCSDAKACIDMPVMLSRAHRTLHLRSTPTSQLAIAPRASSLPAIFAIPEDSAVVLDVLANSRQDTLDDGLYFDATPLPYAYGAEPDAPVLAAAEVVAAVAEMQWREARRLVVQGRIVAMQWHGGNAPAVPVVAKPAKRKRTAPMEETHSVAFTSDIAQTTQPLTTIASEPPGHGGYWTATLLGLNQTVSLQLVIASSHKGLDALANRIAGQSIVAVIDAFRQDTRLMELVLAGIA* # ORIGINAL: g1266.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 10944 11942 . - . ID=g1266;Name=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 10944 11942 . - . ID=g1266.t1;Parent=g1266;Name=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 11827 11942 . - . ID=g1266.t1.exon1;Parent=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 11827 11942 . - 0 ID=cds.g1266.t1;Parent=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 11429 11712 . - . ID=g1266.t1.exon2;Parent=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 11429 11712 . - 1 ID=cds.g1266.t1;Parent=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 10944 11332 . - . ID=g1266.t1.exon3;Parent=g1266.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 10944 11332 . - 2 ID=cds.g1266.t1;Parent=g1266.t1 #PROT g1266.t1 g1266 MSSRRFFTVYASSAAVVGGILWVASPVADRAMRALTSSRYDGVLLSPTPPPLQRELAAVAATLGTTLDRVDLMVVSKLFTPAASGSRIHPFSRALLVVPESMVVRFIVDPAADSLSAMERFQLAHELAHIRNEDHLRQGVLDYALFCVVTLVPAYLRTIVRVPVPVAAAAGVFGAAAAIVAHRAFSRQTELRADAAAARGGHAAGGIEFFYRVGRALEESKSDSYAARSASTSHLLASLRTVLRDHPSVGERMATVAEESRK* # PASA_UPDATE: g1269.t1, single gene model update, valid-1, status:[pasa:asmbl_8289,status:3], valid-1 NODE_579_length_20840_cov_43.8575 . gene 15959 18472 . + . ID=g1269;Name=g1269.t1 NODE_579_length_20840_cov_43.8575 . mRNA 15959 18472 . + . ID=g1269.t1;Parent=g1269;Name=g1269.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 15959 16185 . + . ID=g1269.t1.utr5p1;Parent=g1269.t1 NODE_579_length_20840_cov_43.8575 . exon 15959 16954 . + . ID=g1269.t1.exon1;Parent=g1269.t1 NODE_579_length_20840_cov_43.8575 . CDS 16186 16954 . + 0 ID=cds.g1269.t1;Parent=g1269.t1 NODE_579_length_20840_cov_43.8575 . exon 17101 18472 . + . ID=g1269.t1.exon2;Parent=g1269.t1 NODE_579_length_20840_cov_43.8575 . CDS 17101 18380 . + 2 ID=cds.g1269.t1;Parent=g1269.t1 NODE_579_length_20840_cov_43.8575 . three_prime_UTR 18381 18472 . + . ID=g1269.t1.utr3p1;Parent=g1269.t1 #PROT g1269.t1 g1269 MEASDAALSPKHTTQDSEVASSSAPSSAANPLLLIPLSHSHGRSMSESTLCDASDAGSGERPSSSPTGSDPDLASSGGNRVGKRNSQVMKLVSAFEQLPSRPEQLASPAAPTPAQQTALEDARVDPNLFNSSRTVFEQHGQPAPAPQRSKSVDFGGVPAVQMHPQVQLTGGHEGDRRPPLPRKMSIILTDALDMLPVHDSGADVRVVTVPRPSFSRRLSFITSRHVAQELDTTEDSASGAATSQMTAAEGGTQGIDDSIQRALQWLINALQPTEMCRMIVELDAGGMGGVSGSNYLALVSSRQNSHEFVLLTLDKATSPPASPHVGPAPAELFSVGIVLPLFRHMSVNLKGDGTFSVETESRRRYAFKTSSVRSMWSTIMTVRDALDRTLKANVYDGAGPKWVAYYEHLASPARMLRTDVADVRPESPEPSRAVYVEAAPGEPYRPTRDELVRELREVMMHADLDDISCKDVRDALEAHFGIPLGYCKEFIDEQMMLIVGQMDPPSKIFDHLYLGSEWNASNKRELETNGVGYVLNMALEIDNFFPGNFEYHHCIIHDEPTEQILPLFDATYKFIKRAKDSGSKLLVHCKMGVSRSATAVIAYAMKANNWTLQEAYQYVRSRRACVRPNAGFLEQLREYEGILRAARYQKQFDKADAEAAAAAVNTAVAGVGGADSGRDASL* # ORIGINAL: g1271.t1 original gene structure, not modified by PASA NODE_579_length_20840_cov_43.8575 AUGUSTUS gene 20223 20771 . - . ID=g1271;Name=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS mRNA 20223 20771 . - . ID=g1271.t1;Parent=g1271;Name=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 20758 20771 . - . ID=g1271.t1.exon1;Parent=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 20758 20771 . - 0 ID=cds.g1271.t1;Parent=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 20555 20634 . - . ID=g1271.t1.exon2;Parent=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 20555 20634 . - 1 ID=cds.g1271.t1;Parent=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS exon 20223 20449 . - . ID=g1271.t1.exon3;Parent=g1271.t1 NODE_579_length_20840_cov_43.8575 AUGUSTUS CDS 20223 20449 . - 2 ID=cds.g1271.t1;Parent=g1271.t1 #PROT g1271.t1 g1271 MMAICCTVTFDPTAEGPHIKHALDYFQFSLKGVSFLPRDNGAYAQMPYEPIDKATYERLLDDLSAARMLDVSASRDEDQQPDLFCDSAACEVPTIRKTATDGAPIE* # PASA_UPDATE: g1268.t1, single gene model update, valid-1, status:[pasa:asmbl_8287,status:3], valid-1 NODE_579_length_20840_cov_43.8575 . gene 12950 15611 . - . ID=g1268;Name=g1268.t1 NODE_579_length_20840_cov_43.8575 . mRNA 12950 15611 . - . ID=g1268.t1;Parent=g1268;Name=g1268.t1 NODE_579_length_20840_cov_43.8575 . five_prime_UTR 15381 15611 . - . ID=g1268.t1.utr5p1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 15356 15611 . - . ID=g1268.t1.exon1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 15356 15380 . - 0 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 15162 15243 . - . ID=g1268.t1.exon2;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 15162 15243 . - 2 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 14749 15071 . - . ID=g1268.t1.exon3;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 14749 15071 . - 1 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 14338 14634 . - . ID=g1268.t1.exon4;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 14338 14634 . - 2 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 13485 14142 . - . ID=g1268.t1.exon5;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 13485 14142 . - 2 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . exon 12950 13328 . - . ID=g1268.t1.exon6;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . CDS 13022 13328 . - 1 ID=cds.g1268.t1;Parent=g1268.t1 NODE_579_length_20840_cov_43.8575 . three_prime_UTR 12950 13021 . - . ID=g1268.t1.utr3p1;Parent=g1268.t1 #PROT g1268.t1 g1268 MADASKAPVCSRCRQLVTDQRVLQAMGRDWHQACFRCTDCGSALDKYYYERDANPFCDGCFLRRFGKRCHGCSQYITGPIMAAQDRLYHTECFLCGACGKMLDVGELFAIRDAGIVCAACTAQGSPVTATPRLPAATDAPPANTKVSLGTDGTKLVTIVRPATGGVLGMYIREGDGGERIAGIFVSRLLPGSRADNCGDVRVGDEILEVNGAKTSGCSLDTVTTMLKNVPGDLVLRIRPCVAVELLTERVLESPDGGLKVPEDDGSRPSSTLLDSGDEDLVSSPPQMHRRLSSRIFRLADLEVGERIGKGFYGEVFKVTHKHTGAVMVLKELKSYDKEARVSFLKEVSLLKTLLHPNILEFIGVFVKDRKLHLITEFIEGGTLRKLIKNPAVDLPWSLRIRFAHDIARGMVYLHAMRVIHRDLKSKNCLVRSNMSIVVADFGLARSVSDRAQRMTVAGSPYWMAPEMLRGEEYDAKIDVFSYGIVLCEIIGRMKADPDEMPRTSEFGLDVDKFRHHPSCAGCPEALMQLAIDCCAIEPPRRPEFTAIVKSIEAMRRGSGDASG* # ORIGINAL: g1677.t1 original gene structure, not modified by PASA NODE_2423_length_6343_cov_37.6458 AUGUSTUS gene 118 1080 . - . ID=g1677;Name=g1677.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS mRNA 118 1080 . - . ID=g1677.t1;Parent=g1677;Name=g1677.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 417 1080 . - . ID=g1677.t1.exon1;Parent=g1677.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 417 1080 . - 0 ID=cds.g1677.t1;Parent=g1677.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 118 194 . - . ID=g1677.t1.exon2;Parent=g1677.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 118 194 . - 2 ID=cds.g1677.t1;Parent=g1677.t1 #PROT g1677.t1 g1677 MATQLSGGQVARGSDASDKFHPFQIEEVDQSSPIIVTPPVLQPHSQPQHIGSSHSALANAVSNTRRTLGPISRRGSFNSNTNASGNAVKDNNKLGGESTLFDSILTSYQSSQQLSPKSGHTPPGSASMQGSMNSVHPSRVTSPAPTPTGDGLWAKRRPGSDGDVDIQLEDLDNGRKTGTKTPEHRGSVDDGAMKSAAAHRVTSSALGSNFAASMFDIGTATEVKRKATTFAFEEMGNPTKTGPLIDV # ORIGINAL: g1678.t1 original gene structure, not modified by PASA NODE_2423_length_6343_cov_37.6458 AUGUSTUS gene 4150 6217 . + . ID=g1678;Name=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS mRNA 4150 6217 . + . ID=g1678.t1;Parent=g1678;Name=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 4150 4340 . + . ID=g1678.t1.exon1;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 4150 4340 . + 0 ID=cds.g1678.t1;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 4486 4569 . + . ID=g1678.t1.exon2;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 4486 4569 . + 1 ID=cds.g1678.t1;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 4866 4986 . + . ID=g1678.t1.exon3;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 4866 4986 . + 1 ID=cds.g1678.t1;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 5554 5755 . + . ID=g1678.t1.exon4;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 5554 5755 . + 0 ID=cds.g1678.t1;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS exon 6030 6217 . + . ID=g1678.t1.exon5;Parent=g1678.t1 NODE_2423_length_6343_cov_37.6458 AUGUSTUS CDS 6030 6217 . + 2 ID=cds.g1678.t1;Parent=g1678.t1 #PROT g1678.t1 g1678 MGGISFLDEPVRVRAPDYGGIDLAVVDAVLVSSYQSLLGLCHLCANEAFRGRIYATDPTIQLGKLLLLEAHELYSSSYQPPSSSVIGGSEPVPQVAGVGSVADMAHWQLPPDKRKIEATISRIKPVYFNQRIFAYVGRSSLAAARHPEPFDLNALRGCNTLLLGGISSAPFRVSRAASVPVDSALPSPEAMLVELASVVAATTLKGGSVLIPITPIGVVYDLVEYLHAHLHTSSVPFYFVSPVAANSMALAGIFGEWYDLS* # ORIGINAL: g7722.t1 original gene structure, not modified by PASA NODE_3342_length_3687_cov_32.0271 AUGUSTUS gene 1136 3651 . + . ID=g7722;Name=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS mRNA 1136 3651 . + . ID=g7722.t1;Parent=g7722;Name=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 1136 1386 . + . ID=g7722.t1.exon1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 1136 1386 . + 0 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 1636 1729 . + . ID=g7722.t1.exon2;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 1636 1729 . + 1 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 1977 2054 . + . ID=g7722.t1.exon3;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 1977 2054 . + 0 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 2275 2431 . + . ID=g7722.t1.exon4;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 2275 2431 . + 0 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 2593 2650 . + . ID=g7722.t1.exon5;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 2593 2650 . + 2 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 2863 3006 . + . ID=g7722.t1.exon6;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 2863 3006 . + 1 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 3329 3459 . + . ID=g7722.t1.exon7;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 3329 3459 . + 1 ID=cds.g7722.t1;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS exon 3644 3651 . + . ID=g7722.t1.exon8;Parent=g7722.t1 NODE_3342_length_3687_cov_32.0271 AUGUSTUS CDS 3644 3651 . + 2 ID=cds.g7722.t1;Parent=g7722.t1 #PROT g7722.t1 g7722 MSTCVLRAYPRSSGVTGSFGSVLRAYYSSDAASVAAVDAGTKTSTVSAGRARVLPDGPSFEEFVSGKLDSESTMTPAQKRALTRQRLPRWLKTDIPVSENFNKLKTTLRELKLHTVCEEARCPNIGECWGGKEGTATATIMLMGDLCTRGCRFCAVKTDRHPPPLDAAEPTHTAEAIARWGLGYVVLTSVNRDDLPDGGSNHFAQTVIELKKRNPKILVECLTPDFLGDKKAIETVAKSGLDVFAHNLETVENLQIHVRDRRANYRQSIDVLVHAKKTAPSIVTKTSIMLGLGETDEEILRAMKGV* # PASA_UPDATE: g4144.t1, single gene model update, valid-1, status:[pasa:asmbl_6889,status:12], valid-1 NODE_4037_length_2300_cov_29.1622 . gene 157 2262 . + . ID=g4144;Name=g4144.t1 NODE_4037_length_2300_cov_29.1622 . mRNA 157 2262 . + . ID=g4144.t1;Parent=g4144;Name=g4144.t1 NODE_4037_length_2300_cov_29.1622 . five_prime_UTR 157 199 . + . ID=g4144.t1.utr5p1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 157 292 . + . ID=g4144.t1.exon1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 200 292 . + 0 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 570 752 . + . ID=g4144.t1.exon2;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 570 752 . + 0 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 1017 1178 . + . ID=g4144.t1.exon3;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 1017 1178 . + 0 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 1482 1625 . + . ID=g4144.t1.exon4;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 1482 1625 . + 0 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 1749 1788 . + . ID=g4144.t1.exon5;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 1749 1788 . + 0 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . exon 2059 2262 . + . ID=g4144.t1.exon6;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . CDS 2059 2219 . + 2 ID=cds.g4144.t1;Parent=g4144.t1 NODE_4037_length_2300_cov_29.1622 . three_prime_UTR 2220 2262 . + . ID=g4144.t1.utr3p1;Parent=g4144.t1 #PROT g4144.t1 g4144 MSIVENYEMRESLIDVLGTHECASCPQLAEHYARVAARQYLSDEVRRLRMALSDHSLQMLPEYRQRTAVLESLKYVDRNAGAIQLKGQVACELATCDDAKALIATEMIFHGALAHLEPQEVVAVLSALIFQEKSDSEPALTERLAAARDNMVAIGADIASTQVQCGMSTPPDDFVRTQFKFGMMEVCYEWALGMPFCQITELTDVQEGSIVRCITRLSETCRDVRNAARVIGDPVLYEKMERAQAMIRRDIVFAASLYTT* # PASA_UPDATE: g3307.t1, single gene model update, valid-1, status:[pasa:asmbl_7028,status:12], valid-1 NODE_4152_length_2106_cov_35.4727 . gene 267 1996 . + . ID=g3307;Name=g3307.t1 NODE_4152_length_2106_cov_35.4727 . mRNA 267 1996 . + . ID=g3307.t1;Parent=g3307;Name=g3307.t1 NODE_4152_length_2106_cov_35.4727 . five_prime_UTR 267 271 . + . ID=g3307.t1.utr5p1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 267 402 . + . ID=g3307.t1.exon1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 272 402 . + 0 ID=cds.g3307.t1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 650 715 . + . ID=g3307.t1.exon2;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 650 715 . + 1 ID=cds.g3307.t1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 959 1028 . + . ID=g3307.t1.exon3;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 959 1028 . + 1 ID=cds.g3307.t1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 1302 1396 . + . ID=g3307.t1.exon4;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 1302 1396 . + 0 ID=cds.g3307.t1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 1599 1618 . + . ID=g3307.t1.exon5;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 1599 1618 . + 1 ID=cds.g3307.t1;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . exon 1947 1996 . + . ID=g3307.t1.exon6;Parent=g3307.t1 NODE_4152_length_2106_cov_35.4727 . CDS 1947 1996 . + 2 ID=cds.g3307.t1;Parent=g3307.t1 #PROT g3307.t1 g3307 MDNEEGERGDKFMRQIESIAAHVPYQVCAGNHEAAYNFSHYTNRFSAISENTPSGTNWFFSFDVSWVHFVAFNTEVYYQDVLADIMAAQFEWLQKDLAAARANSKETPFIVLYGHRPLVCSNVDDIPDCTSDAMVVSIRNCFN* # ORIGINAL: g3076.t1 original gene structure, not modified by PASA NODE_17636_length_220_cov_64.0897_potentialcontaminant AUGUSTUS gene 1 220 . - . ID=g3076;Name=g3076.t1 NODE_17636_length_220_cov_64.0897_potentialcontaminant AUGUSTUS mRNA 1 220 . - . ID=g3076.t1;Parent=g3076;Name=g3076.t1 NODE_17636_length_220_cov_64.0897_potentialcontaminant AUGUSTUS exon 1 220 . - . ID=g3076.t1.exon1;Parent=g3076.t1 NODE_17636_length_220_cov_64.0897_potentialcontaminant AUGUSTUS CDS 1 220 . - 1 ID=cds.g3076.t1;Parent=g3076.t1 #PROT g3076.t1 g3076 VLETPEGYIFESNAILRYIARLDKTNTLYGKTTYENSMVDAWLDLVASETDPLATHVFAFVRSQTAYPADFVE # PASA_UPDATE: g10547.t1, single gene model update, valid-1, status:[pasa:asmbl_5217,status:12], valid-1 NODE_2903_length_4793_cov_42.0047 . gene 69 839 . - . ID=g10547;Name=g10547.t1 NODE_2903_length_4793_cov_42.0047 . mRNA 69 839 . - . ID=g10547.t1;Parent=g10547;Name=g10547.t1 NODE_2903_length_4793_cov_42.0047 . five_prime_UTR 758 839 . - . ID=g10547.t1.utr5p1;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . exon 663 839 . - . ID=g10547.t1.exon1;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . CDS 663 757 . - 0 ID=cds.g10547.t1;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . exon 384 420 . - . ID=g10547.t1.exon2;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . CDS 384 420 . - 1 ID=cds.g10547.t1;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . exon 69 263 . - . ID=g10547.t1.exon3;Parent=g10547.t1 NODE_2903_length_4793_cov_42.0047 . CDS 69 263 . - 0 ID=cds.g10547.t1;Parent=g10547.t1 #PROT g10547.t1 g10547 MPSSLVSYATRAAGSSTIAVLTIKNPPVNALSHGVRKGLLESIERAVSDANVSAVVVSGEGRMFSAGADISEFTGADVMRGMCHNEHPVCVRGVRGVLHILEIPHPAV* # ORIGINAL: g10549.t1 original gene structure, not modified by PASA NODE_2903_length_4793_cov_42.0047 AUGUSTUS gene 3872 4721 . - . ID=g10549;Name=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS mRNA 3872 4721 . - . ID=g10549.t1;Parent=g10549;Name=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 4581 4721 . - . ID=g10549.t1.exon1;Parent=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 4581 4721 . - 0 ID=cds.g10549.t1;Parent=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 4246 4314 . - . ID=g10549.t1.exon2;Parent=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 4246 4314 . - 0 ID=cds.g10549.t1;Parent=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 3872 4039 . - . ID=g10549.t1.exon3;Parent=g10549.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 3872 4039 . - 0 ID=cds.g10549.t1;Parent=g10549.t1 #PROT g10549.t1 g10549 MTRPLHCKLQSAERELTNKKKEADFKSGKALGVSGRDLFMFKPELFEDDADAADDTVYARRSEDDILAEEAARDAASAAAHARELEPDADEDNNDEAGPSGSVEVDEDLFNAADDLENLDLEDDE* # ORIGINAL: g10548.t1 original gene structure, not modified by PASA NODE_2903_length_4793_cov_42.0047 AUGUSTUS gene 1465 3282 . + . ID=g10548;Name=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS mRNA 1465 3282 . + . ID=g10548.t1;Parent=g10548;Name=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 1465 1596 . + . ID=g10548.t1.exon1;Parent=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 1465 1596 . + 0 ID=cds.g10548.t1;Parent=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 1899 2199 . + . ID=g10548.t1.exon2;Parent=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 1899 2199 . + 0 ID=cds.g10548.t1;Parent=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS exon 2600 3282 . + . ID=g10548.t1.exon3;Parent=g10548.t1 NODE_2903_length_4793_cov_42.0047 AUGUSTUS CDS 2600 3282 . + 2 ID=cds.g10548.t1;Parent=g10548.t1 #PROT g10548.t1 g10548 MILQGVVGVGKTTFLRMAAIICALLFSEYMPVYWTLLITMLPLRQGFRTLNNSVYLLRHVYPIRTISGVKAYLTNRFPELANDAENVLHVTGGAGVRCKLCGKVWFCDRFAEEVWHDFIKRSAPAHVDDALLSGAGAPHPLSTKGHFAPGLLAKRFFPHIPLPLLLFAGQLIDNVFPIFLLIGIEDIRIIPGFTQSNPLDLYEIRYSHSLAGCVVWSCLLGFAFAQYRGTRHPRKFSNAIVVAAVALSHYPLDVICHKPDMPLGFGDKSPKYGLGLWDYKWETYALEVALYMLSLYVYASATRPTFVSRTEFWGRFGVLTFGAVGIFAQSLSLFPDMVLYKWQMVPNLFAASALFCYLGKLLDAARKPIRE* # ORIGINAL: g2989.t1 original gene structure, not modified by PASA NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS gene 203 1051 . + . ID=g2989;Name=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS mRNA 203 1051 . + . ID=g2989.t1;Parent=g2989;Name=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS exon 203 308 . + . ID=g2989.t1.exon1;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS CDS 203 308 . + 1 ID=cds.g2989.t1;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS exon 413 448 . + . ID=g2989.t1.exon2;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS CDS 413 448 . + 0 ID=cds.g2989.t1;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS exon 580 731 . + . ID=g2989.t1.exon3;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS CDS 580 731 . + 0 ID=cds.g2989.t1;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS exon 875 953 . + . ID=g2989.t1.exon4;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS CDS 875 953 . + 1 ID=cds.g2989.t1;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS exon 1049 1051 . + . ID=g2989.t1.exon5;Parent=g2989.t1 NODE_4755_length_1270_cov_32.2854_potentialcontaminant AUGUSTUS CDS 1049 1051 . + 0 ID=cds.g2989.t1;Parent=g2989.t1 #PROT g2989.t1 g2989 FTVIFQQATPADSWSISTELISAAVKAHGRDANPDTPKVDEYGDSPNVVRTKAANGEAVDLQMKFFGSGGREPPSYTLFRSFMSKADTIAICFNPAKRNGFEYLSDLHAQVVTLDKSSENRGTK* # PASA_UPDATE: g5645.t1, single gene model update, valid-1, status:[pasa:asmbl_6648,status:12], valid-1 NODE_3854_length_2622_cov_70.5332 . gene 535 2383 . + . ID=g5645;Name=g5645.t1 NODE_3854_length_2622_cov_70.5332 . mRNA 535 2383 . + . ID=g5645.t1;Parent=g5645;Name=g5645.t1 NODE_3854_length_2622_cov_70.5332 . five_prime_UTR 535 599 . + . ID=g5645.t1.utr5p1;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . exon 535 934 . + . ID=g5645.t1.exon1;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . CDS 600 934 . + 0 ID=cds.g5645.t1;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . exon 1252 1412 . + . ID=g5645.t1.exon2;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . CDS 1252 1412 . + 1 ID=cds.g5645.t1;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . exon 1865 1992 . + . ID=g5645.t1.exon3;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . CDS 1865 1992 . + 2 ID=cds.g5645.t1;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . exon 2279 2383 . + . ID=g5645.t1.exon4;Parent=g5645.t1 NODE_3854_length_2622_cov_70.5332 . CDS 2279 2383 . + 0 ID=cds.g5645.t1;Parent=g5645.t1 #PROT g5645.t1 g5645 MANARLVFVFVALAAIASASTAMSIGYAAMDESELVGAGFTLVESKFPAQKIYKKESHTIVFQGEHKPAKGIPDLMERFGITPEDYKNNKLRGTPTPDIKGNDYRFIPEYKGSIMPGANAAKWSGDCFKSNKASLLVSGNTATFSVELDTPSSLLCTEIYLIGSLESWHLHEFVINGAHTLVWKNLSDAALTDINENGFRVFKFVDGATDTLKEIFETLTMFVGGLGLGDKAKVPEGASSHQ* # ORIGINAL: g13635.t1 original gene structure, not modified by PASA NODE_1161_length_13460_cov_58.2947 AUGUSTUS gene 10667 13460 . + . ID=g13635;Name=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS mRNA 10667 13460 . + . ID=g13635.t1;Parent=g13635;Name=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 10667 11265 . + . ID=g13635.t1.exon1;Parent=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 10667 11265 . + 0 ID=cds.g13635.t1;Parent=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 11474 11658 . + . ID=g13635.t1.exon2;Parent=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 11474 11658 . + 1 ID=cds.g13635.t1;Parent=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 11972 13460 . + . ID=g13635.t1.exon3;Parent=g13635.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 11972 13460 . + 2 ID=cds.g13635.t1;Parent=g13635.t1 #PROT g13635.t1 g13635 MSATGAREAPRASRSRRAVPESSGSCRPPPYVATWLDGPLRETARSTWNRDVRCIRESLASALGSAMDPRAHTPDACAQPADCSASEDMRVRMSAQSVRHGDHDVEFRAVRSDAGACDADRVCETRPFVRAHAAVLAARCPPALAKWLALDGVAGVMCTARSPSSAPPAAAAASDGHVAGAVIATVAVHADPALVCAILRWVYGCDMQYLNLNKLVQLSHFARHLYGVERLMRDCDAAIAKHVDDNPNLNPNPPHDPPPLDDALRWRACCLWDQPRDLSAATDACCRSTARFQYGANALASVSLLGPNLSVEARPPGLEEKAAHASSDHSTDEAVCAAPQPGGPLMTARIDSPVEHSPVCAVAPAESDVCHVDAPSSTSASRSPACTDSTVTHSPVCTDNTSSVNGDSSEVDASQSPVEHLAPCPSVSAAISISNAGSRSPVLLVLDSAVPVHVTTDGLHRATTPSTSTEPALRGTPEGSARTAPSAAVRGLRAHHAAQSRLTPSATPRHSAQARTAPAASAIAESRVRPSVQSRASSSSSARIASRSSANPAGAHVITASHAVRPVPSSVSAGQAAPSNATARASAPLTWGTQRLHRVVPNPSGNAMALKGTLASEAAENSQSRPQVRARSTKAASKVSVISDPSNPSDPSDPSAPASHAPSPTIDEQLSVSVRSPFVAGGAIGTDLLALLAAANSCADALENDEKEDPEAPLTARLRTDWLLDLAAPDFWLVVGRYRIGVHAVVLRARSAYFDAM # ORIGINAL: g13633.t1 original gene structure, not modified by PASA NODE_1161_length_13460_cov_58.2947 AUGUSTUS gene 3116 5179 . - . ID=g13633;Name=g13633.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS mRNA 3116 5179 . - . ID=g13633.t1;Parent=g13633;Name=g13633.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 3116 5179 . - . ID=g13633.t1.exon1;Parent=g13633.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 3116 5179 . - 0 ID=cds.g13633.t1;Parent=g13633.t1 #PROT g13633.t1 g13633 MKRRRSLTILAVASVFFFGLLTVWRTAGSDHDAPAEERIRLTHAVDHADDYVDASKEEAKEFVRPSGIDAIGDRRVHFSEQHVALERAWHNAVRTPKPAHDQALTPDRVALTEESRQTLNKGVSMWQRTTGEQRTANTRQPTPTSRSVTTMGSQTNETIGKYLLCELKYGPNNQYHCFVECVKLAIVLNRTVALLPFRLHYLDRRRLGLSTEGAGLNNTELVRRRIASARSFHSTFDIDALASVIPRSHIISAADFARVLEQRAHVVDCLWNLDVPEPSRWEFAGDFVGNITPARRVRARPSNLTTEGIIDALGIAHTSYHTIAVDNLFLRNSVYRVDRRSLVHGGLWERDRYLATLRGVVHAPHIVAQASIFVASYIRKAVPLQDEYIAIHWRRADFAHVSKENCKSVGADCQDTTGIAELLDVLDSAFLSLRSASWVAKEYGRPSRRSSNATFEGMEHTRPIVYVSATRLLSDEIAALEQRGYRDIIRYEPPPGQDAYYTSLIEQEICLRATSFVASPLSTWSDRILVTRIALGSTHTWSASQLVVSESNYTHSALVPPQLSRLIASNTICGYVYMGVSREPPNIMSLRCPGGNSVIESVLFASFGAPSGICGTFAPDELCHSSESVERVTGLCVGRGHCDIPVTNNVAEGGFSIACSKPMGGHALAVLARCGIPKESQSATVDS* # ORIGINAL: g13634.t1 original gene structure, not modified by PASA NODE_1161_length_13460_cov_58.2947 AUGUSTUS gene 5707 9974 . - . ID=g13634;Name=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS mRNA 5707 9974 . - . ID=g13634.t1;Parent=g13634;Name=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 9897 9974 . - . ID=g13634.t1.exon1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 9897 9974 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 9614 9736 . - . ID=g13634.t1.exon2;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 9614 9736 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 9219 9341 . - . ID=g13634.t1.exon3;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 9219 9341 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 6870 8864 . - . ID=g13634.t1.exon4;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 6870 8864 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 6390 6593 . - . ID=g13634.t1.exon5;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 6390 6593 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 6192 6281 . - . ID=g13634.t1.exon6;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 6192 6281 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS exon 5707 5832 . - . ID=g13634.t1.exon7;Parent=g13634.t1 NODE_1161_length_13460_cov_58.2947 AUGUSTUS CDS 5707 5832 . - 0 ID=cds.g13634.t1;Parent=g13634.t1 #PROT g13634.t1 g13634 MFGRSHKANCGDRFIIPESKLGPIYKAKTYEESLFEVDVFRVRPSKSSAVYKSVCAQLAAEVLPLVKEDEVFSVHLGYRASTQLSHGVFLVKAHAQALAKDLASSYLRSHNAPKGAFILTIISPTEVFAPNSSAEQLHDAVTLGDARSTEPSEFKKEQAELTKEATNDEQEGNVAHTQDTGPSTAAEGAAVAAGAADGAGAGAGAGGGGGGGDAPATADGAEERDSHSLSSLSSSRRLGRSGDGAAATAPEDVGMDRCLGFNFQSKYLAVSTFDDAFGDGSPRRPWCSCDVCAFDYNVYHASSSTPRGSGPEPLASRASLPDLDAVELETNENGELEEVVGFCSRPRLSAANLAKFRKGGVLVARHKLFVVTGDGIVLGKIRFGIGILAPGVTYAQIYARMNLAVDVRRCITATARARDDAAESALGATVALTGDPMSTSTPAWKAFIGHALRRRNRREADPFRTLLDVQTRLMEQLENYSDPATAGAHVADGPSRRDSKSKFGGSVAGVVKKLLVGGTVDESDEHGTLDDRRPGHFIIGAALRQALSRHKMSLNVVHYIAAEDLASIAYRACYALLPGTRPLPGARSSSAPSDTAQHGDQAHPAHGNSIHEGALPGETAAVNIIWVVGPIMNSFQRGHVALQVASKAHVNVFVVDQRGHGMSAGPRGDAPSLRTPLRDVRAMVRHVRMNYLSTPIVLVGHGLGGTVVLNYASWKRRLAVDGYAFFAPLVCWAMPENMRRVWIQHSDAWIRRRMLLSRLTNGRLGNAPAIDIRELQRTVFGKKNFDQVVKDNESRGSIFITEIAKRDDPPDALHMPESLSVHHLANMVSRPLKKVFVDIDKPFGLWYGNDHEIFDPKPVVAAAELSRVSNKNLELVDGVNYIALLDMAPELLVSWLHNTFPLNFAAVQSLAE* # PASA_UPDATE: g13632.t1, single gene model update, valid-1, status:[pasa:asmbl_608,status:3], valid-1 NODE_1161_length_13460_cov_58.2947 . gene 720 2968 . + . ID=g13632;Name=g13632.t1 NODE_1161_length_13460_cov_58.2947 . mRNA 720 2968 . + . ID=g13632.t1;Parent=g13632;Name=g13632.t1 NODE_1161_length_13460_cov_58.2947 . five_prime_UTR 720 791 . + . ID=g13632.t1.utr5p1;Parent=g13632.t1 NODE_1161_length_13460_cov_58.2947 . exon 720 1990 . + . ID=g13632.t1.exon1;Parent=g13632.t1 NODE_1161_length_13460_cov_58.2947 . CDS 792 1990 . + 0 ID=cds.g13632.t1;Parent=g13632.t1 NODE_1161_length_13460_cov_58.2947 . exon 2128 2968 . + . ID=g13632.t1.exon2;Parent=g13632.t1 NODE_1161_length_13460_cov_58.2947 . CDS 2128 2968 . + 1 ID=cds.g13632.t1;Parent=g13632.t1 #PROT g13632.t1 g13632 MLSTCPPRAPRFLFRFVMVASVAAAAYVGLLVLAPTPPDNAAPIAEGAWWPVPISRLSLIKAEEMGPGWEDSVHAPVDEAMLVHSNVAYVDDRYMPPRINVVGALSRFTDWSTDLPAPPLHPALPFVFCAFGRRRAFSSAAEAEAASERERVVPWGISKARLFADTSINTGPWLRRGTHAAVTVSCPLPRAVLSLMGRETTDDRSYGAPETHPLELFEHSVYVRLVISWSDDIDGDNGTMLPYSIESSQPVPISPYKSVDEHGDPLQRKKAVNAVDPAWVSIRVPAHAHSSARGTARSAASAPISSSAWPARKEFGACLTTVSGDDTIAIRLVEWMEFALRMGASHVFLYVDDSKASASVHAVAEHYRKRGVATAIEWHFPPLSRDYDPLKRDAAFLFNRGQLVVANDCLQRARIMEIELVQFADLDEYLAPGPAAREEERDWRALFKDPSMTSTNRSYMAYGFQNVLYPIDCVHEFQLPQLGVDANVNARAVGEPRLSDESHETYRPMFASFPERSPDVFLYPDRSKNFVRPIFVHFMGVQRVQHGVRPKTAAIPNRRVSAFALDFMRVVDASNGAVLGRRFWWTTRLIAPFPMYSYDDNFSDKFVFDVAVARNHHFRHAYGGSKICPSDLLLEPLEVLNRAAVEGIRGRILSVVSTIGLKLPGRNDMMIEDTFYTDQ* # PASA_UPDATE: g7508.t1, single gene model update, valid-1, status:[pasa:asmbl_5673,status:12], valid-1 NODE_3175_length_4099_cov_46.6834 . gene 167 1778 . + . ID=g7508;Name=g7508.t1 NODE_3175_length_4099_cov_46.6834 . mRNA 167 1778 . + . ID=g7508.t1;Parent=g7508;Name=g7508.t1 NODE_3175_length_4099_cov_46.6834 . exon 167 898 . + . ID=g7508.t1.exon1;Parent=g7508.t1 NODE_3175_length_4099_cov_46.6834 . CDS 167 898 . + 0 ID=cds.g7508.t1;Parent=g7508.t1;5_prime_partial=true NODE_3175_length_4099_cov_46.6834 . exon 1183 1302 . + . ID=g7508.t1.exon2;Parent=g7508.t1 NODE_3175_length_4099_cov_46.6834 . CDS 1183 1302 . + 0 ID=cds.g7508.t1;Parent=g7508.t1 NODE_3175_length_4099_cov_46.6834 . exon 1449 1778 . + . ID=g7508.t1.exon3;Parent=g7508.t1 NODE_3175_length_4099_cov_46.6834 . CDS 1449 1778 . + 0 ID=cds.g7508.t1;Parent=g7508.t1 #PROT g7508.t1 g7508 FLTKFDCAVSKSGYGIDAGFRQPPPQGTFDVAAFAQKYDSITGDTPVVLFADPIGGFSNRLFGLFTALVIAVLADRPLLVDWDFPPVFALIVPNFGGKVDDFQRMRWASHPLLASRPSSLMNEPNRCYFSSTCGQYCSLLSSTPVPQLYHLEKQVMRVETNCPLYLQIVRNRENVRRLIELGVYAVDGASPDDALTRPNFVGFHVFGLLYRRLFRLADHMVPAFEAVRTQIASADLSIGIQIRMGGPRFNDPQWLTMEDLDLFWDCADTIAHEHYRNVPIPEGQKIRWFVATDTPEARDAATARFGDRVITSGADVILTHMAPERHFDPKGLGPIVLDQFLLGECDYVLLSRHSTFGEPGAMRTGKIPFKPTFCSSPKCARMLAGYFNSEDYN* # PASA_UPDATE: g12308.t1, single gene model update, valid-1, status:[pasa:asmbl_8219,status:12], valid-1 NODE_5661_length_762_cov_33.3406 . gene 6 688 . - . ID=g12308;Name=g12308.t1 NODE_5661_length_762_cov_33.3406 . mRNA 6 688 . - . ID=g12308.t1;Parent=g12308;Name=g12308.t1 NODE_5661_length_762_cov_33.3406 . five_prime_UTR 630 688 . - . ID=g12308.t1.utr5p1;Parent=g12308.t1 NODE_5661_length_762_cov_33.3406 . five_prime_UTR 363 452 . - . ID=g12308.t1.utr5p2;Parent=g12308.t1 NODE_5661_length_762_cov_33.3406 . exon 630 688 . - . ID=g12308.t1.exon1;Parent=g12308.t1 NODE_5661_length_762_cov_33.3406 . exon 6 452 . - . ID=g12308.t1.exon2;Parent=g12308.t1 NODE_5661_length_762_cov_33.3406 . CDS 9 362 . - 0 ID=cds.g12308.t1;Parent=g12308.t1 NODE_5661_length_762_cov_33.3406 . three_prime_UTR 6 8 . - . ID=g12308.t1.utr3p1;Parent=g12308.t1 #PROT g12308.t1 g12308 MFIADADCCAIVNSTGKLISTLSAADLRGLRIKSVQALTMPVHQYIARNHFGVLPNAIGVRSDSTLLATAATSVVAGVHRVWVIDSEDRPISVVRLTDVLSALARHVEPTVVMWREE* # ORIGINAL: g9958.t1 original gene structure, not modified by PASA NODE_2177_length_7403_cov_65.7989 AUGUSTUS gene 1798 3788 . + . ID=g9958;Name=g9958.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS mRNA 1798 3788 . + . ID=g9958.t1;Parent=g9958;Name=g9958.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 1798 3176 . + . ID=g9958.t1.exon1;Parent=g9958.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 1798 3176 . + 0 ID=cds.g9958.t1;Parent=g9958.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 3377 3788 . + . ID=g9958.t1.exon2;Parent=g9958.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 3377 3788 . + 1 ID=cds.g9958.t1;Parent=g9958.t1 #PROT g9958.t1 g9958 MNSSRYSQVGFDTDENGSTSSIEDIEMATREGTRANEANDCAANIIDKTTTGDADGGPVLSRCVKRLGCGMKHDLQKRFPLYASDWRDGLHPKILSAALLMYFGSIAPALTFGDLLARDTGLNYGVTEVLVSTAVSGVFFSLFAGQPIVIVGVTGPVTIFSITVYQLSEKFDLPFIQWMFWICLWSGIMHAVLALVNGTDLVRRVTRFSGDVFGVLIGVIYIVQAILDLVNVFDDGPNNAALLSLLVVVATFALAMSFHEARGWPYFNMTTRTIIADYGPSLTLVLVTGATYIGKLAQPDIRRISAFLPDSFGTTSERPWIVSPMDGMPTWAVFAAIVPALILTALFFFDHNVSSLLSQKPEFNLVKGSAYHWDFFCLGMAMILCGVLGIPPGNGLIPQAPLHTRALADIVEVRAHGYKKETYVHVREQRLSNLLQSVAIGLSLALLGVIGRIPTAVLSGFFLYMGFASFEGNQFAARTRMFITDHSLMPPVPYVINIPFHVIAKFTAVQLAAFGVIYGVTWTPAAISFPLFILLLVPLRQFVLPRYFDARHIELLDDAEDRPFETKVGDCTGGVSAEGDVASTGYGDPATAADVP* # ORIGINAL: g9959.t1 original gene structure, not modified by PASA NODE_2177_length_7403_cov_65.7989 AUGUSTUS gene 4373 6825 . - . ID=g9959;Name=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS mRNA 4373 6825 . - . ID=g9959.t1;Parent=g9959;Name=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 6481 6825 . - . ID=g9959.t1.exon1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 6481 6825 . - 0 ID=cds.g9959.t1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 5880 6173 . - . ID=g9959.t1.exon2;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 5880 6173 . - 0 ID=cds.g9959.t1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 5502 5693 . - . ID=g9959.t1.exon3;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 5502 5693 . - 0 ID=cds.g9959.t1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 5103 5331 . - . ID=g9959.t1.exon4;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 5103 5331 . - 0 ID=cds.g9959.t1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 4727 5008 . - . ID=g9959.t1.exon5;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 4727 5008 . - 2 ID=cds.g9959.t1;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS exon 4373 4656 . - . ID=g9959.t1.exon6;Parent=g9959.t1 NODE_2177_length_7403_cov_65.7989 AUGUSTUS CDS 4373 4656 . - 2 ID=cds.g9959.t1;Parent=g9959.t1 #PROT g9959.t1 g9959 MEKGKETHRKRGDDDAHPPTPSVAAAPVPGSFKTIKANNAKPRVSDHDAPVVDGEGSAQDAPTTVPCVAWADLIAHKHLDAGYASKFIEGLPALLVDASMSILRPKGYMGAFPRRGRADVIVNDGGAAQYLEMVVALNERLLGEVVVTSGAEVGGVNYKGRPLLELARVGIDHHALADAALAELLNELRKRRKTPHIRIIDEHNAFWSADGDDERTFMVYSGSQHSKFEGHIPSGLYQCLRYIQPFSNDEFEVMQGLSTYPAALRAMEDEVAERTGLFFNAVRKMLFAAVDNPQFSGAYRDRGLIFWYKSSLDKPRSMRAVHEMARLILLESMFSYGVPDDDILRMFRDPPSAAREEWWELMIPALRDYIPLPRGAFVPWRRRWENRVIRFPPVIPRFDLLFDTSECTIFIQVSIRTVGEHDRDSKALHLAFDREPTFTRDPAASVATVPADNPAPAAAGTKRFARKRPQQGDGRDVEAPTTTRHFRVLRCDGREAPAIFLFVSFAKCPTSPLAGLKYDNLRVVYRQCLEKVYPALKIVKD* # PASA_UPDATE: g9957.t1, single gene model update, valid-1, status:[pasa:asmbl_3692,status:12], valid-1 NODE_2177_length_7403_cov_65.7989 . gene 844 1341 . + . ID=g9957;Name=g9957.t1 NODE_2177_length_7403_cov_65.7989 . mRNA 844 1341 . + . ID=g9957.t1;Parent=g9957;Name=g9957.t1 NODE_2177_length_7403_cov_65.7989 . five_prime_UTR 844 975 . + . ID=g9957.t1.utr5p1;Parent=g9957.t1 NODE_2177_length_7403_cov_65.7989 . exon 844 1341 . + . ID=g9957.t1.exon1;Parent=g9957.t1 NODE_2177_length_7403_cov_65.7989 . CDS 976 1341 . + 0 ID=cds.g9957.t1;Parent=g9957.t1 #PROT g9957.t1 g9957 MLKRTYNLSPAFLKRYWESAEFRNDVWATIPRKRLGLHLIHVRSVRGDLSALGGVHSLDLSHCDGVTDVSTLGCIPRHSLNLNYCNRVTDVSALGGVHTLNLSYCDGVTDVSVLGPYARSL* # ORIGINAL: g542.t1 original gene structure, not modified by PASA NODE_2634_length_5592_cov_22.8343 AUGUSTUS gene 339 4709 . - . ID=g542;Name=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS mRNA 339 4709 . - . ID=g542.t1;Parent=g542;Name=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 4551 4709 . - . ID=g542.t1.exon1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 4551 4709 . - 0 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 4094 4351 . - . ID=g542.t1.exon2;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 4094 4351 . - 0 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 3694 3830 . - . ID=g542.t1.exon3;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 3694 3830 . - 0 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 3182 3374 . - . ID=g542.t1.exon4;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 3182 3374 . - 1 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 2231 2753 . - . ID=g542.t1.exon5;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 2231 2753 . - 0 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 1933 2023 . - . ID=g542.t1.exon6;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 1933 2023 . - 2 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 1689 1821 . - . ID=g542.t1.exon7;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 1689 1821 . - 1 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 751 1453 . - . ID=g542.t1.exon8;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 751 1453 . - 0 ID=cds.g542.t1;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS exon 339 462 . - . ID=g542.t1.exon9;Parent=g542.t1 NODE_2634_length_5592_cov_22.8343 AUGUSTUS CDS 339 462 . - 2 ID=cds.g542.t1;Parent=g542.t1 #PROT g542.t1 g542 MSPRWHSQPHAALKAAMPSFTKRINWTTTASFASFVNIALLTCVVGSTFFGLSIADAQRGTLTVTLGQASISQSDCNDATLGYTPCDPYFDISFGVDGAQVASCPASRDSYISKPSNPFNASKFSCGGTIPSLLDSTTSMITITVSATDYDDGFFEGGNDFIDSGSATGPAVPTTALRLNFGKSSLATVSMVRRAIALLVPATARRDGWGTRAPNNVAEPHMARIVRVHVDVKMEPSATGSRGGVLARPECDGSSFGPGCATPCGCQNGAKCDRFTGACACKAGWYGDKCQTACPSGKYGPVCTQSCNCTNGATTCDRFTGACICTAGWMGYSCSQTCNDTMYGPGCISACGCKNGATTCNATTGQCACLAGWTGRACNTSCSSDKYGPGCATACGCLNGATTCDRFTGICDCTVVSGWNGANYCDRFMGNCNCTHGWTGKVCNVSCSTLVPQRYAPPPLAKGNVAKASTKVLYLELAEGEWEYEIERIGCPFVPIVRWGGGFFNDTRDLVPNEKYIYILTAVNPADATNNTKAPTVQLKAVVATREDPPDRPTAAEALVIPLDKTRRIVRVSWFDDRSSGPINRTYITRSDGKTNTTTAFRQFTDDAVEPGKVYWYRIVSENQWGNSTDAAMTNNVTVPIVEREYNGPVTDANVSANESNTGAIVGSVIGSLVFVCASVFGGVFIWRRRHKKKREAMVRSELELIDTVVRRPEIAEIEIPGSCIRFREKIGEGEFGEVYLSDVDFGKGKATAAVKTFKLSAMASVDDIRSAR # ORIGINAL: g11753.t1 original gene structure, not modified by PASA NODE_773_length_17871_cov_51.7709 AUGUSTUS gene 2563 9385 . + . ID=g11753;Name=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS mRNA 2563 9385 . + . ID=g11753.t1;Parent=g11753;Name=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 2563 3875 . + . ID=g11753.t1.exon1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 2563 3875 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 3993 4206 . + . ID=g11753.t1.exon2;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 3993 4206 . + 1 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 4341 4466 . + . ID=g11753.t1.exon3;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 4341 4466 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 4627 6651 . + . ID=g11753.t1.exon4;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 4627 6651 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 7026 7198 . + . ID=g11753.t1.exon5;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 7026 7198 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 7374 7534 . + . ID=g11753.t1.exon6;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 7374 7534 . + 1 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 7671 7945 . + . ID=g11753.t1.exon7;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 7671 7945 . + 2 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 8095 8374 . + . ID=g11753.t1.exon8;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 8095 8374 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 8551 8771 . + . ID=g11753.t1.exon9;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 8551 8771 . + 2 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 8974 9086 . + . ID=g11753.t1.exon10;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 8974 9086 . + 0 ID=cds.g11753.t1;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 9241 9385 . + . ID=g11753.t1.exon11;Parent=g11753.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 9241 9385 . + 1 ID=cds.g11753.t1;Parent=g11753.t1 #PROT g11753.t1 g11753 MDSAFCGNLAASVWSEHYFGECFLESVVCGTLQSLVALAAFREIYILRKSERRRRLSFHDSYDLPGHVIHAVHVGCAVLLAVIPLISISARLESSGSGSPAAIFSGLTGFICWIAYAIASYLTRSRLRALFHPVIIVGLVLAVVAGYCLRAIGIIFVALNGSAWINVWNVASLVSAAIASVVVVLAVDDNTTTRVVQAMFDHPDHGHASGVSINSRRHLSPVLHDAAAETQRLLSGDIPYYRDDAAERASPEDFAGFFSRVFLAWIGPLMLLGKTRPLEQSDLPQLPVDLSTADAAAEFEQCLKAQNMRTRDRNGSGEAASPWQPLRSARSQQQMHGCAAVGRADAFGGDDFEVLSPARALLRSFNRMFGWSYYPLGIFKFLADCAGFAGPLLLSRLVTFVEEGTEPLKTGILFGCGLVLSAFLGSIFSTQYDYRVNRLGIRVRAAIVSAIYSHSLGVPSPAAVGSTAGGVANLMSTDADRIVNFCNSFHQFWSLPFQIIVSLYLLYLQVGIACLAGVAVAVVLIPINRVIAVKIAALSQTMMRQKDERVKVTNEVLYGIRVIKLYAWELNFMERIGALRKAELNSLKGRKYLDALCVYFWATTPVLISILTFATYSLTGHNLTAAKVFTSLSLFNLLISPLNAFPWVINGLIEAWISVKRVGAFFRCPTIDRTTFYQATPDAEDEHLWHVDGTSASFGDGVRTVHVLEHQSPSHDDDVGLADSHGSSGSLRMHKEARKQDISLAIHAGSFSWPRRAIVAIDAVATESDKGVRDGDGEGEAAGGGPRMALSDINLEVHSGEFIGIAGRVGSGKSAFLASLLAETTRVHGTVYLCGLSAGSGPRGIAYSPQQGWVRNASLRDNIVFGRAFDRRRYDAVIDACALRDDLAMLPAGDLTEIGENGTNLSGGQRQRVALARAAYSMDAEVFIFDDPLSAVDAPVGQHIMKHCIAGLLAGRTRILCTHHTQHLIACDRVIVLDGGRVVMDGKPDSNYELARYLLSAGPKTASGAQGADVGAVGGASVESAETVIPLTPESARRKFDAIAQHAGPASHRQSLTSFASEDVALYRQISNEDELEESSRAAIRTISVPSTGGEEHGTHDGTLVTEEERATGVVKARVFGRYWAAVGSVLAPAILISLAAMQASRNGADFWLSAWVGSGDDGDAPVGRVGYHLGVYGAIAGANAAFTLLRSFLFAYGGIVAAERLHDGILSSILKAPISFFDTTPYAVDDSLPFMLNIFLAQSFGIVGTLAITCYGLRYFAFALVPLAGLYYYIQSYYRQTSREVKRLDTISRSPVYAHFSETIAGASTIRAFCAEHRFEEENKRNVDANMRATFIGYAVAQWLNVRLQMIGVLLLAVVVGLSVAEHHFHGIDPSLVGLSVAYALSVTSLLSGAVTSFTETEKEMVSVERIGQYTEDVPSETSTAACTPPNGWPTQGHVVFRDVRLRYRSGLSPALESVTFDVHPGERIGLAGRTGSGKSSVFLALFRIVEAESGSISIDGINIRTVGLMALRSQLSIIPQDPVLFCGSVRENLDCCHQFADVEVWNALVRCHMSETVMDLEGGLDAVVEERGANFSVGQRQLLCLGRALLRRSKILCIDEATASVDKETDALIRNAIRTEFANATVITIAHRIESIIDSDRVIVLDRGRVAEFDTPAALLGRSDSLFSALVAASTRHNH* # ORIGINAL: g11752.t1 original gene structure, not modified by PASA NODE_773_length_17871_cov_51.7709 AUGUSTUS gene 675 1723 . - . ID=g11752;Name=g11752.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS mRNA 675 1723 . - . ID=g11752.t1;Parent=g11752;Name=g11752.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 1168 1723 . - . ID=g11752.t1.exon1;Parent=g11752.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 1168 1723 . - 0 ID=cds.g11752.t1;Parent=g11752.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS exon 675 985 . - . ID=g11752.t1.exon2;Parent=g11752.t1 NODE_773_length_17871_cov_51.7709 AUGUSTUS CDS 675 985 . - 2 ID=cds.g11752.t1;Parent=g11752.t1 #PROT g11752.t1 g11752 MPAIPDLELEKAEEMFVEGYTADRVQHQGFDMGTAFLLTLLSGICTGLGGMVMVLMGSPSVAFVGRLEGFSAGVMVMLSARDMIYPSYEVNGINGTVLGFVLGVAMFWSINRLIPEPDGDYCASLFGTDKRELMTRGFMRTAFVLALGISMHNLPEGIAVFLSSLNAPKLGVMMAISMAIHNITEGMAVAAPIYFSTRNAMYAVLLPLVSGLFEPLGALAAGMVLHPVMTNEVLHFLLAVVAGIMVLLSTSELYPLSYRHTGLWPSVAAATSGMFVCHMTLYITEEFA* # PASA_UPDATE: g11754.t1, single gene model update, valid-1, status:[pasa:asmbl_9314,status:12], valid-1 NODE_773_length_17871_cov_51.7709 . gene 10114 17567 . + . ID=g11754;Name=g11754.t1 NODE_773_length_17871_cov_51.7709 . mRNA 10114 17567 . + . ID=g11754.t1;Parent=g11754;Name=g11754.t1 NODE_773_length_17871_cov_51.7709 . five_prime_UTR 10114 10398 . + . ID=g11754.t1.utr5p1;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . exon 10114 10549 . + . ID=g11754.t1.exon1;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . CDS 10399 10549 . + 0 ID=cds.g11754.t1;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . exon 10784 11407 . + . ID=g11754.t1.exon2;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . CDS 10784 11407 . + 2 ID=cds.g11754.t1;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . exon 11575 17567 . + . ID=g11754.t1.exon3;Parent=g11754.t1 NODE_773_length_17871_cov_51.7709 . CDS 11575 17567 . + 2 ID=cds.g11754.t1;Parent=g11754.t1 #PROT g11754.t1 g11754 MSSIGRGAGDASSQNARASSTSSSTAPKAKFSSLNLNKVFNPTPKPAATTGPARYGSGLQVLGKVGAGRAGKPAIAAPKPVSLPSRKRENAGLDPNVNLVPSGGLGWGAPTASKDDADEQQQLTQTPQQPQQQPQQQPTPTQISQSEASRRAQFFQPNFQSDDVSAARPTTAEVQPSPPVSRWGQSATPAAQAPPQAHAGPVAASERSSSLSSRDFPTLGEKPGESGPGLRSQSGEGWRDRPEGGFSRDPYARPPPGPGYDRGDGYRGPARSDQGRSYPRDRFDQPAGARYGSPNGPPSDARDRGYGRQSASPYGRDFGAQEPRRFEPSGSFGERDARSTSEPPVARPVTVRPEEIAAMGELAKRPRGEDWSMDQEMDFSESLVFEGDEKPAVKGSAADKGKEHPAHAPLAAADRTDVRDVHAPPPQVQQQPADREAVYRDRAGDRDRDRDWHDRRQAYPPQSGRGDEEYSREYDNRRYAGDRDAQYGGGRQLPPREYPSGGGGGYDRDRPPHDRAQPQRWHQDDQRYGGRGNQSNAPAGQWHAEEGKDRGDRDRDRDYSRGGEYPPSERHVPGGAPQQSGYGARRDFGAADAEYRDRDGRDVRGGGAPPHDGRDYHRGEGPREGREYREYREPPRDHPSHPQHPQHHLHQQQQARQGAREHGDKYGAISIQPRPKDGSDAAKGQPEVTPQQQHEQELAVRAAAEARAKAAAIAAAQNKPSDRLVVLSKDGRDPRKEKRQNSEEGEKRESEQFSGDAQPSSYPSSQAPARADQHHGQSSAHHGGHQGAASHGAAPAGQSAQPKKEAWSNIGPVNRVDLRQELARTKETERNAKKEAMAAAALASQLAEQAAKADASRAEALKAAGDAANAEGGAESHINASEVPTESGSGDNRARDGGYSRRDPRDVRERGERDRPDRFEGRDRYDRERDREQRFDRGGDRVDDRDRGRGRGGRDFDFRRKDREQSEGADAAPGAAPTAQDEPRGRGTARPERKAGPLVVRLPGGKSASVRPADEPKGDEQAAGSETPAGSAPTAVGAAAEGRDNVRGPARDRKERQDDRFGGKQQRDQREQRGDGQGSERRDRDRKGREPTREVTGARSGQAEKAEKGRHARFADADEELLLHADGASRLNAPDPLRSGVVAVEELPPSVLGGADEGFGEFTTVVSKQDKRKQKEIEEQKRRQDEKRERRKKEKDDQRRDRTDRGEKRDGDSDDDSGRSDDGGDSHSARVRIPGGDGKSGEPAVANAWVRPPRVVDEKKHEEPKSPLLGGKQKVGRKEGADGRSHSDSDATPSPRAGVPPRLDIGRSPLAHAVESGPGPRTPGNRKDSVSELSEAAIPAGILDEPTTPGESIAAKTMIAARAAWDASAGNADDKAKTDHKAAGASGEGIATSTTRSMLSQNDAIGFGAGQQTFAPIGMAGSGVARAAPSAASGAEGQADQLALAQSGEMPMNAATVDAMRQAWQYSQPMDQYLQQSVFSSGTSPMSPMLVYGPPSYLGFGGGTFMPQSAGQGVRRGPHAPGQQSQLGQPPVSAGVAQQQQHHHQQQQQQQQQQQQQQVDWSKASTAGAAAGSKFATGATAQQQSASSAEDASARVDTMAAAGAAASAAAASSHQQAGNPAAAASWPTFTLPGMHDPMYPYYLYQMAAVQQQQQQQQQQQQQQQGGAAGGAGGAIGVRGNYGAQYTPFQPSPMDFYAQNPFAAAMMMGNPKAAAAAAAAYNRNAIVGYQQQQQQQQQQQQSQLRGGRPQQGPIGTSALNMAGLSAGQKPSQPGTGGSGPSGAQGESAGASTSPAAAAAAAALASAQSASSSGTAVPQQGPSPSLASSKGIDVSAPPFNPTPGSGGQMRQGATPGYRPQAAQQQQQGTFVGARPFVPQQGQQAPRPAQMQAMQGMLAQGLLSSQMGGMGGMGGMVQSLPPQYAFLKQQQQYMLAAQQQAIAQQQHQQQQQQQQQQQQQQQQQQQLLDAQLDAKKKAAEQALSVTASTEAVAPAAPASTGPSAAAVIPASIAQAQGGNVRTFVPLSSGPSSAATGARRGGPGGPGGAGPQGHKHGAEGDASTDRTQQPGSTEGGKGGQRGRGGQGPRRGDGHKEQGHKSSSSQKPPRDPQHQQQQQQQQQSHAQQNVLGSADVVGGVAGAESAGSAGRGGHGRKFVRGGGNAGGSVPQGAGRGAKPQNAAGAAGALPRAPAAEGEGSASPAPNSSGDGPDAPREKRERRRRGSGAKKNAAAGEAAGGAAGSHASQAPQASAAPAASD* # PASA_UPDATE: g2264.t1, single gene model update, valid-1, status:[pasa:asmbl_4236,status:12], valid-1 # PASA_UPDATE: g2264.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4237,status:12], valid-1 # ORIGINAL: g2264.t2 original gene structure, not modified by PASA NODE_2405_length_6399_cov_51.0825_potentialcontaminant . gene 898 5960 . + . ID=g2264;Name=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . mRNA 898 5960 . + . ID=g2264.t1;Parent=g2264;Name=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . five_prime_UTR 898 943 . + . ID=g2264.t1.utr5p1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 898 1125 . + . ID=g2264.t1.exon1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 944 1125 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1574 1738 . + . ID=g2264.t1.exon2;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1574 1738 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1971 2097 . + . ID=g2264.t1.exon3;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1971 2097 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2285 2391 . + . ID=g2264.t1.exon4;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2285 2391 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2583 2616 . + . ID=g2264.t1.exon5;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2583 2616 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2796 3121 . + . ID=g2264.t1.exon6;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2796 3121 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3416 3506 . + . ID=g2264.t1.exon7;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3416 3506 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3783 3849 . + . ID=g2264.t1.exon8;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3783 3849 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4011 4097 . + . ID=g2264.t1.exon9;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4011 4097 . + 2 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4323 4462 . + . ID=g2264.t1.exon10;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4323 4462 . + 2 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4765 4829 . + . ID=g2264.t1.exon11;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4765 4829 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5196 5280 . + . ID=g2264.t1.exon12;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5196 5280 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5419 5513 . + . ID=g2264.t1.exon13;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5419 5513 . + 0 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5768 5960 . + . ID=g2264.t1.exon14;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5768 5831 . + 1 ID=cds.g2264.t1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . three_prime_UTR 5832 5960 . + . ID=g2264.t1.utr3p1;Parent=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . mRNA 898 5960 . + . ID=g2264.t1.1.5b6be70b;Parent=g2264;Name=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . five_prime_UTR 898 943 . + . ID=g2264.t1.1.5b6be70b.utr5p1;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 898 1125 . + . ID=g2264.t1.1.5b6be70b.exon1;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 944 1125 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1574 1738 . + . ID=g2264.t1.1.5b6be70b.exon2;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1574 1738 . + 1 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1971 2097 . + . ID=g2264.t1.1.5b6be70b.exon3;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1971 2097 . + 1 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2285 2391 . + . ID=g2264.t1.1.5b6be70b.exon4;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2285 2391 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2583 2616 . + . ID=g2264.t1.1.5b6be70b.exon5;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2583 2616 . + 1 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2796 3121 . + . ID=g2264.t1.1.5b6be70b.exon6;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2796 3121 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3416 3506 . + . ID=g2264.t1.1.5b6be70b.exon7;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3416 3506 . + 1 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3783 3849 . + . ID=g2264.t1.1.5b6be70b.exon8;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3783 3849 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4011 4097 . + . ID=g2264.t1.1.5b6be70b.exon9;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4011 4097 . + 2 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4323 4462 . + . ID=g2264.t1.1.5b6be70b.exon10;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4323 4462 . + 2 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4765 4829 . + . ID=g2264.t1.1.5b6be70b.exon11;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4765 4829 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5196 5280 . + . ID=g2264.t1.1.5b6be70b.exon12;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5196 5280 . + 1 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5419 5960 . + . ID=g2264.t1.1.5b6be70b.exon13;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5419 5538 . + 0 ID=cds.g2264.t1.1.5b6be70b;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . three_prime_UTR 5539 5960 . + . ID=g2264.t1.1.5b6be70b.utr3p1;Parent=g2264.t1.1.5b6be70b NODE_2405_length_6399_cov_51.0825_potentialcontaminant . mRNA 944 5831 . + . ID=g2264.t2;Parent=g2264;Name=g2264.t1 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 944 1125 . + . ID=g2264.t2.exon1;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 944 1125 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1574 1738 . + . ID=g2264.t2.exon2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1574 1738 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 1971 2097 . + . ID=g2264.t2.exon3;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 1971 2097 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2285 2391 . + . ID=g2264.t2.exon4;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2285 2391 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2583 2616 . + . ID=g2264.t2.exon5;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2583 2616 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 2796 3121 . + . ID=g2264.t2.exon6;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 2796 3121 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3416 3506 . + . ID=g2264.t2.exon7;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3416 3506 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 3783 3849 . + . ID=g2264.t2.exon8;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 3783 3849 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4011 4097 . + . ID=g2264.t2.exon9;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4011 4097 . + 2 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4320 4462 . + . ID=g2264.t2.exon10;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4320 4462 . + 2 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 4765 4829 . + . ID=g2264.t2.exon11;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 4765 4829 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5196 5280 . + . ID=g2264.t2.exon12;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5196 5280 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5419 5513 . + . ID=g2264.t2.exon13;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5419 5513 . + 0 ID=cds.g2264.t2;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . exon 5768 5831 . + . ID=g2264.t2.exon14;Parent=g2264.t2 NODE_2405_length_6399_cov_51.0825_potentialcontaminant . CDS 5768 5831 . + 1 ID=cds.g2264.t2;Parent=g2264.t2 #PROT g2264.t1 g2264 MAGTALLCCFVFVCAATCVVAGVTGVPSDDAGLNSLLNAETDLRRHMHFISDPLLEGRAPGTRGESLAADYLVSEVQAIPRIVPAGDNGAYTQTVPLESVTVTTCDQLSFNTTGDSALAYTFLADFVVSTELPDVSSIDMSGDVVYVGYGISATDLGWDDYKDADVSGKVLLMLVGQPPTGPFADQPLTYYGRWSYKYEEGRRRKAKAVWLVHTNATAGYPWSVVVNSNGGEQVRAYGAIDGALAVKGWISSGATDAIGRAALGDTKGALDALFSAADSPSFSPIALPLTQAVAFNVSRRVFNGTNVVAALVGSSPEAVVFSGHLDHLGTRSGAIYTGAIDNASGAAMVLALARAFASSADSLNRTVVFLFPTGEEAGLLGSDFYAGHPTAVGGHVLTPIASINFDIGNVWGRTGDVSVLGQGKSDLADIIDTFGAAPEKLRVSPDPAPSTGLFFRSDHFSFARRGIPGVWLYLGRDFVGKPSDFYDDTIQQGYFGAVYHTPLDTYDASWDLTGMIQQLRVAYRTAVAVAAGVATPTCKTGSCI* #PROT g2264.t1.1.5b6be70b g2264 MAGTALLCCFVFVCAATCVVAGVTGVPSDDAGLNSLLNAETDLRRHMHFISDPLLEGRAPGTRGESLAADYLVSEVQAIPRIVPAGDNGAYTQTVPLESVTVTTCDQLSFNTTGDSALAYTFLADFVVSTELPDVSSIDMSGDVVYVGYGISATDLGWDDYKDADVSGKVLLMLVGQPPTGPFADQPLTYYGRWSYKYEEGRRRKAKAVWLVHTNATAGYPWSVVVNSNGGEQVRAYGAIDGALAVKGWISSGATDAIGRAALGDTKGALDALFSAADSPSFSPIALPLTQAVAFNVSRRVFNGTNVVAALVGSSPEAVVFSGHLDHLGTRSGAIYTGAIDNASGAAMVLALARAFASSADSLNRTVVFLFPTGEEAGLLGSDFYAGHPTAVGGHVLTPIASINFDIGNVWGRTGDVSVLGQGKSDLADIIDTFGAAPEKLRVSPDPAPSTGLFFRSDHFSFARRGIPGVWLYLGRDFVGKPSDFYDDTIQQGYFGAVYHTPLDTYDASWDLTGMIQQLRVAYRCGSATQY* #PROT g2264.t2 g2264 MAGTALLCCFVFVCAATCVVAGVTGVPSDDAGLNSLLNAETDLRRHMHFISDPLLEGRAPGTRGESLAADYLVSEVQAIPRIVPAGDNGAYTQTVPLESVTVTTCDQLSFNTTGDSALAYTFLADFVVSTELPDVSSIDMSGDVVYVGYGISATDLGWDDYKDADVSGKVLLMLVGQPPTGPFADQPLTYYGRWSYKYEEGRRRKAKAVWLVHTNATAGYPWSVVVNSNGGEQVRAYGAIDGALAVKGWISSGATDAIGRAALGDTKGALDALFSAADSPSFSPIALPLTQAVAFNVSRRVFNGTNVVAALVGSSPEAVVFSGHLDHLGTRSGAIYTGAIDNASGAAMVLALARAFASSADSLNRTVVFLFPTGEEAGLLGSDFYAGHPTAVGGHAVLTPIASINFDIGNVWGRTGDVSVLGQGKSDLADIIDTFGAAPEKLRVSPDPAPSTGLFFRSDHFSFARRGIPGVWLYLGRDFVGKPSDFYDDTIQQGYFGAVYHTPLDTYDASWDLTGMIQQLRVAYRTAVAVAAGVATPTCKTGSCI* # PASA_UPDATE: g6761.t1, single gene model update, valid-1, status:[pasa:asmbl_1771,status:12], valid-1 NODE_1497_length_10927_cov_39.2207 . gene 92 6417 . + . ID=g6761;Name=g6761.t1 NODE_1497_length_10927_cov_39.2207 . mRNA 92 6417 . + . ID=g6761.t1;Parent=g6761;Name=g6761.t1 NODE_1497_length_10927_cov_39.2207 . five_prime_UTR 92 92 . + . ID=g6761.t1.utr5p1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 92 247 . + . ID=g6761.t1.exon1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 93 247 . + 0 ID=cds.g6761.t1;Parent=g6761.t1;5_prime_partial=true NODE_1497_length_10927_cov_39.2207 . exon 621 693 . + . ID=g6761.t1.exon2;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 621 693 . + 1 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 1186 1305 . + . ID=g6761.t1.exon3;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 1186 1305 . + 0 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 1777 1919 . + . ID=g6761.t1.exon4;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 1777 1919 . + 0 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 2210 2282 . + . ID=g6761.t1.exon5;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 2210 2282 . + 1 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 2516 2637 . + . ID=g6761.t1.exon6;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 2516 2637 . + 0 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 2986 3051 . + . ID=g6761.t1.exon7;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 2986 3051 . + 1 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 3270 4158 . + . ID=g6761.t1.exon8;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 3270 4158 . + 1 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 4407 4802 . + . ID=g6761.t1.exon9;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 4407 4802 . + 0 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . exon 5137 6417 . + . ID=g6761.t1.exon10;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . CDS 5137 6033 . + 0 ID=cds.g6761.t1;Parent=g6761.t1 NODE_1497_length_10927_cov_39.2207 . three_prime_UTR 6034 6417 . + . ID=g6761.t1.utr3p1;Parent=g6761.t1 #PROT g6761.t1 g6761 RGPFYSGERTSDETKICAERLLAAVSENDVAKTRKNFAAIIEKHSAADASKWCGPSLLKACREGLVECATVLIDGGIDANTSDPLNDRTCLHKAIGHAQFPIVQLLISRAADLERKDLNGRRPLHYAAMSNHPAIVSALLCAAAQPDCRDSDGQTPLFYAVVKGHADCVRAMLDGGADIETCTTTSEQTSLFLACQYGHQSIASMLVEKGAKVNRGDEQGQTPLHVACREGHVACVRLLLAGGADVDARDRGFNWTPLFEASREGHADIVRVMVDGGASPTAVDSLGWTSRMHALYRGHVALASMLQGAGGEARAADSRESAENDVDMHDDDDPIPELSLPPPALPMKQYGHTYIRNRLQLHVTMSASRMVPDGAAHATQKALSAEAARNRSDSAAQYEDDVDGHVPSVSTLRRDQPLKVQVAVATPLSSYRVSLTCARGAGSVPHVSTFPLGDDDDSATFEADEMTQLVLRVDVTAPFSGTLLARGLVAAEAFAALDSGVITCPLLVPGTLEQFGTLRFGYLLVRPFLHPAIARGITSNTYWRSTKVISGKSSAEGDTSPLFTATTVGTQRHPNSHAGPVCLVTAASLAPSYIDVPVQLSADGVPITCRSPVVRLAGLEPGIPVCALTAAQLAAIGGDKCGALSIETLSARVPGEDSGAKFRRLSAETYAITLADALKITPADVGLNLIVLPPADYSGNASLAWVSCMSPDPTSSDAIAGGRHPFGPSVRSFSFNAIADAVLECVYAHVTNTSRHITFTSNDRSLCLMLSLKQPNYPVFLSTTAGFPMPRPLVADDITPGIDATPSTPSIGAVASVRDANDEEDTSLERAVRFARRAQLLGLRCLADPLVTCPHLVQTIRENGLLLFTWGSLNDCNNDAALSTQRLAGVDAIVARGTAHVDPRILQDDGSGEGTGAGGVSRAGGDVAMTEPQATQVNTPDGGNAGRSVGGVQGHVHDAPQTTGASFGGSIFGMFSK* # ORIGINAL: g6762.t1 original gene structure, not modified by PASA NODE_1497_length_10927_cov_39.2207 AUGUSTUS gene 6658 9230 . - . ID=g6762;Name=g6762.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS mRNA 6658 9230 . - . ID=g6762.t1;Parent=g6762;Name=g6762.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS exon 7636 9230 . - . ID=g6762.t1.exon1;Parent=g6762.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS CDS 7636 9230 . - 0 ID=cds.g6762.t1;Parent=g6762.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS exon 6658 7558 . - . ID=g6762.t1.exon2;Parent=g6762.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS CDS 6658 7558 . - 1 ID=cds.g6762.t1;Parent=g6762.t1 #PROT g6762.t1 g6762 MAVLFCDAMRAHLNPDCDTSSPEFLLGSITVAVLSLYNTKDPEQNLPARAALLQFCSFPNDVIARLDMSAHGQTFGDVLWVSVLENHMKLSDADMSHPRRMAYMWLPFLLLRYPRFGSPSARQSLKTNTRLVDMLKRHISQRDSPLAAHAAAALAEVFEFEEESVVASAKLFIRGLDAMFRISDENYKLAHSAVARYATGVSRALTKLREWPSYPLRQSQKECSLQKTPYFPEIAAACLVKLGLMSYAISGVKAVCEGTKQTMVTFSDAAVLIKMLGLIRPVWSRTPANALAFLQQMPMTSPGMPAEEPAYSIFIALQTKCSMGSSCTGVNCACELHNATLHFATGYRMSRELHTEITRLQLYKQQSLLPLFEFAADTIAAYRIPGKQSPLFGAGHRTVLLNDYMCACVTFQSIHEDIENMGNMVGIARAGISTVSSPAVVLSTSPKVTSAVRASYGHIISHVYTLDADGWPHGIPRNQGDGAPRMSWMLANGLNFPYLAIAAMLELHEDIVTRTLDSAASTSTSSVPFYATAVVGATGGLLGISLGDMLNLKSAVQQKIHGTRSPSLGNLKGTKTGRYGMTVVPIDLPDTTAALEFSLEKNRDVRTASIELTEQWLGARHFLLSMHELDVSSPWVLPPNASALSVDSCFAVYCGKCDFVDGLMRLSKGKKPRASPPLCGCGWLMVAPLCGSDMKKARKMYGAFASPLAPAPDASLANKHPPAAAMGSVGANAGSASRARQATTNNSTTVGAVDGTSAKAPPVVVSGTTPSSEQVTSATSADADAQASRVCMHCGRDGVKMFRCGGCMAARYCSRECQKSAWASHKRVCAK* # ORIGINAL: g6763.t1 original gene structure, not modified by PASA NODE_1497_length_10927_cov_39.2207 AUGUSTUS gene 9668 10837 . + . ID=g6763;Name=g6763.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS mRNA 9668 10837 . + . ID=g6763.t1;Parent=g6763;Name=g6763.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS exon 9668 10324 . + . ID=g6763.t1.exon1;Parent=g6763.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS CDS 9668 10324 . + 0 ID=cds.g6763.t1;Parent=g6763.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS exon 10712 10837 . + . ID=g6763.t1.exon2;Parent=g6763.t1 NODE_1497_length_10927_cov_39.2207 AUGUSTUS CDS 10712 10837 . + 0 ID=cds.g6763.t1;Parent=g6763.t1 #PROT g6763.t1 g6763 MDDFDAIPIIDIAALCDPQSSIDEQFQAARAVGNACERIGFFFIRNHGVDEQLIRDADAASRAFFSLPGEVKRQIAMANAPATHRGYSGLLEEFVDPTTGGDWKEGLDIGLELGPGDPDVDAQVPLHGPNQWPSDEALPGFRTTTYALFQRLIAVGEVLVRAIELYFGLNRGEIGDKFTKPLALMRLLHYPPATAREVAGEGMGCGAHTDYGCVTVLHQDAVGGLQVLNGAGRWIDAVPAEGTLVVNLGDMLERWTNGRFR # ORIGINAL: g5994.t1 original gene structure, not modified by PASA NODE_1407_length_11510_cov_38.5807 AUGUSTUS gene 76 1888 . - . ID=g5994;Name=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS mRNA 76 1888 . - . ID=g5994.t1;Parent=g5994;Name=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 1856 1888 . - . ID=g5994.t1.exon1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 1856 1888 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 1632 1709 . - . ID=g5994.t1.exon2;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 1632 1709 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 1338 1499 . - . ID=g5994.t1.exon3;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 1338 1499 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 1100 1208 . - . ID=g5994.t1.exon4;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 1100 1208 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 821 873 . - . ID=g5994.t1.exon5;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 821 873 . - 2 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 356 508 . - . ID=g5994.t1.exon6;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 356 508 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS exon 76 177 . - . ID=g5994.t1.exon7;Parent=g5994.t1 NODE_1407_length_11510_cov_38.5807 AUGUSTUS CDS 76 177 . - 0 ID=cds.g5994.t1;Parent=g5994.t1 #PROT g5994.t1 g5994 MEMDDRLRMASGVNSDAVAASLRSAGYLALRKQDEVDGRVFCDPNLPALPPHQRRQAYQSIAQCIAHLHSLDARAAGLGGIGVPGDYFQRSIIDLATAHNMSLSVPSAEAEAVVRWLAENAPMAESRAVLHGDLRIDSFVFHPTQPRVVGVSGWSCASLGHPLADLADFAVAFRMPHVGAPPFVAVSSPGVPEEAEFLRAYCTAADSCYPISGWNFYLALAFFKLAVKLQ # PASA_UPDATE: g5995.t1, single gene model update, valid-1, status:[pasa:asmbl_1489,status:3], valid-1 NODE_1407_length_11510_cov_38.5807 . gene 2472 7764 . + . ID=g5995;Name=g5995.t1 NODE_1407_length_11510_cov_38.5807 . mRNA 2472 7764 . + . ID=g5995.t1;Parent=g5995;Name=g5995.t1 NODE_1407_length_11510_cov_38.5807 . five_prime_UTR 2472 2699 . + . ID=g5995.t1.utr5p1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . five_prime_UTR 3050 3179 . + . ID=g5995.t1.utr5p2;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 2472 2699 . + . ID=g5995.t1.exon1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 3050 3833 . + . ID=g5995.t1.exon2;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 3180 3833 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 4262 4429 . + . ID=g5995.t1.exon3;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 4262 4429 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 4651 4797 . + . ID=g5995.t1.exon4;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 4651 4797 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 5038 5115 . + . ID=g5995.t1.exon5;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 5038 5115 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 5434 5485 . + . ID=g5995.t1.exon6;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 5434 5485 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 5995 6119 . + . ID=g5995.t1.exon7;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 5995 6119 . + 2 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 6475 6585 . + . ID=g5995.t1.exon8;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 6475 6585 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 6775 6899 . + . ID=g5995.t1.exon9;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 6775 6899 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 7132 7177 . + . ID=g5995.t1.exon10;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 7132 7177 . + 1 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . exon 7454 7764 . + . ID=g5995.t1.exon11;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . CDS 7454 7525 . + 0 ID=cds.g5995.t1;Parent=g5995.t1 NODE_1407_length_11510_cov_38.5807 . three_prime_UTR 7526 7764 . + . ID=g5995.t1.utr3p1;Parent=g5995.t1 #PROT g5995.t1 g5995 MSQPKKPEGRRLKNILGLSIAPKDGADAAAPAAAPAPAVAVGGGAAGHPAPAVVRGAPQAGVAAGVSQSQQPQQSDLRQPPAVTPTITAAEPLAAPAPDTCRPPSSFATSTSSIAGNGVTGTVSAAAAPSAAAAATSTAGGAKGKGEGKFRPPPLKDVKLDETVRGGHFADADPRKGVDARAQQQAQQPQQLIPPRDGASGSEGRRQSLDSTDGNSDQRQRLNEFLQNRTRIGANTNTDLRGEDFQNIEELGSGSGGVVKKVLHRPTQLVMARKLIHMEIKPDVQKMILRELKILEECRSPFIVGFYGAFFNEGEISICMEYMDAGSLDKLLKKAGKIPEDILSRVAMAVLKGLIYLRDTHKIIHRDVKPSNILMNSSGDIKICDFGVSGELINSMANSFVGTRSYMAPERLEGSVYSAHADVWSLGLSLIEMATGRFPIPPDGKANDSGRPMAIFELLEYIVNGPSPRLPDDMPFSPDFRDFINKSMIKEAVQRPDLKQHLEHPFLKLHKSVDVTKWVAEVMRK* # PASA_UPDATE: g5996.t1, single gene model update, valid-1, status:[pasa:asmbl_1491,status:12], valid-1 NODE_1407_length_11510_cov_38.5807 . gene 7968 10638 . - . ID=g5996;Name=g5996.t1 NODE_1407_length_11510_cov_38.5807 . mRNA 7968 10638 . - . ID=g5996.t1;Parent=g5996;Name=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 10632 10638 . - . ID=g5996.t1.exon1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 10632 10638 . - 0 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 10379 10450 . - . ID=g5996.t1.exon2;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 10379 10450 . - 2 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 9979 10132 . - . ID=g5996.t1.exon3;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 9979 10132 . - 2 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 9720 9802 . - . ID=g5996.t1.exon4;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 9720 9802 . - 1 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 9464 9603 . - . ID=g5996.t1.exon5;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 9464 9603 . - 2 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 9081 9140 . - . ID=g5996.t1.exon6;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 9081 9140 . - 0 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 8697 8757 . - . ID=g5996.t1.exon7;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 8697 8757 . - 0 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 8526 8567 . - . ID=g5996.t1.exon8;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 8526 8567 . - 2 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . exon 7968 8303 . - . ID=g5996.t1.exon9;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . CDS 8206 8303 . - 2 ID=cds.g5996.t1;Parent=g5996.t1 NODE_1407_length_11510_cov_38.5807 . three_prime_UTR 7968 8205 . - . ID=g5996.t1.utr3p1;Parent=g5996.t1 #PROT g5996.t1 g5996 MDVLRHTLADVVGAECADSVLSGEFSDTPCLLTAASKILGLSVILMCLVMKLPQVLRIWGRKSAEGISTISLLLELTSYSINLAYAFRHGYPFTTYGETFFLTIQDIILVLLVFKYNRNIGALFVLVSVAYGATMYAAFSGAIPMIVLSYAQPMGIPITTTSKLTQIVSNYRAGGTGQLSLTTWSMATYGTAVRIFTTMQEVKDVKILVSFSIAFFLNTIITSQIVYYSSRAQKSKRD* # PASA_UPDATE: g1816.t1, single gene model update, valid-1, status:[pasa:asmbl_6580,status:12], valid-1 NODE_3804_length_2716_cov_131.933 . gene 254 2386 . + . ID=g1816;Name=g1816.t1 NODE_3804_length_2716_cov_131.933 . mRNA 254 2386 . + . ID=g1816.t1;Parent=g1816;Name=g1816.t1 NODE_3804_length_2716_cov_131.933 . five_prime_UTR 254 255 . + . ID=g1816.t1.utr5p1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 254 403 . + . ID=g1816.t1.exon1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 256 403 . + 0 ID=cds.g1816.t1;Parent=g1816.t1;5_prime_partial=true NODE_3804_length_2716_cov_131.933 . exon 538 586 . + . ID=g1816.t1.exon2;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 538 586 . + 2 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 743 794 . + . ID=g1816.t1.exon3;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 743 794 . + 1 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 989 1061 . + . ID=g1816.t1.exon4;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 989 1061 . + 0 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 1206 1326 . + . ID=g1816.t1.exon5;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 1206 1326 . + 2 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 1479 1589 . + . ID=g1816.t1.exon6;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 1479 1589 . + 1 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 1822 1902 . + . ID=g1816.t1.exon7;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 1822 1902 . + 1 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . exon 2158 2386 . + . ID=g1816.t1.exon8;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . CDS 2158 2278 . + 1 ID=cds.g1816.t1;Parent=g1816.t1 NODE_3804_length_2716_cov_131.933 . three_prime_UTR 2279 2386 . + . ID=g1816.t1.utr3p1;Parent=g1816.t1 #PROT g1816.t1 g1816 GKVGKKVAFTALNGGAWADYAVANAIEVLVLPDNMTTESGCAAFVNPLSVLSIIEEAKSAGATSILHTAAASALGRMLIREGKAQGLEIIGVVRREEQAAVCRNEGMENVFVTADPDFAKKLSECLKAKNCTVCYDAIAGDLAGTILGLMPPKSTLKVYGALSGASVSNVGSQDLIFHGKTLTGWYLSHYLENKSMLGLFQLMRHLSGSLESSLSTNVRGKFTLHQVADAVADYLANMSGGKVLINPNPVE* # ORIGINAL: g2897.t1 original gene structure, not modified by PASA NODE_17399_length_227_cov_56.9276_potentialcontaminant AUGUSTUS gene 1 227 . - . ID=g2897;Name=g2897.t1 NODE_17399_length_227_cov_56.9276_potentialcontaminant AUGUSTUS mRNA 1 227 . - . ID=g2897.t1;Parent=g2897;Name=g2897.t1 NODE_17399_length_227_cov_56.9276_potentialcontaminant AUGUSTUS exon 1 227 . - . ID=g2897.t1.exon1;Parent=g2897.t1 NODE_17399_length_227_cov_56.9276_potentialcontaminant AUGUSTUS CDS 1 227 . - 1 ID=cds.g2897.t1;Parent=g2897.t1 #PROT g2897.t1 g2897 PMESTLLAAKKAASSNPLFAGVAIHHYLSYFALKAGVNKGDSIDTSVPSVPSVPVAPSAIAPVVRASSSKVTAPA # PASA_UPDATE: g796.t1, single gene model update, valid-1, status:[pasa:asmbl_835,status:12], valid-1 NODE_1216_length_12966_cov_38.5408 . gene 11373 12845 . - . ID=g796;Name=g796.t1 NODE_1216_length_12966_cov_38.5408 . mRNA 11373 12845 . - . ID=g796.t1;Parent=g796;Name=g796.t1 NODE_1216_length_12966_cov_38.5408 . exon 12715 12845 . - . ID=g796.t1.exon1;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . CDS 12715 12845 . - 0 ID=cds.g796.t1;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . exon 12426 12501 . - . ID=g796.t1.exon2;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . CDS 12426 12501 . - 1 ID=cds.g796.t1;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . exon 11373 11945 . - . ID=g796.t1.exon3;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . CDS 11646 11945 . - 0 ID=cds.g796.t1;Parent=g796.t1 NODE_1216_length_12966_cov_38.5408 . three_prime_UTR 11373 11645 . - . ID=g796.t1.utr3p1;Parent=g796.t1 #PROT g796.t1 g796 MHALIGVRQEFGAVDGSTGAADELNYILGQSDKNLQGWCYWQYKYYNDITTASAAEPFYTTNGTLETEKVRTLARPYAPYIQGVPQSMNFDVTTRVFTLTYAVNTSIGAPTEVFLGESLHYPAGFSVSLSPPGAVSWDAPAANGHRFRIVASGAANGAIVTVKVTPKN* # ORIGINAL: g795.t1 original gene structure, not modified by PASA NODE_1216_length_12966_cov_38.5408 AUGUSTUS gene 7149 10898 . + . ID=g795;Name=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS mRNA 7149 10898 . + . ID=g795.t1;Parent=g795;Name=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 7149 7209 . + . ID=g795.t1.exon1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 7149 7209 . + 0 ID=cds.g795.t1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 7363 7407 . + . ID=g795.t1.exon2;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 7363 7407 . + 2 ID=cds.g795.t1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 7532 7667 . + . ID=g795.t1.exon3;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 7532 7667 . + 2 ID=cds.g795.t1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 7994 8159 . + . ID=g795.t1.exon4;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 7994 8159 . + 1 ID=cds.g795.t1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 8559 9731 . + . ID=g795.t1.exon5;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 8559 9731 . + 0 ID=cds.g795.t1;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 10110 10898 . + . ID=g795.t1.exon6;Parent=g795.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 10110 10898 . + 0 ID=cds.g795.t1;Parent=g795.t1 #PROT g795.t1 g795 MAVAVGGREFFSLFDTVDVKATGSLDASQVKEFYEALYLCEVSDAFVENSIRAICNADTCAREEFVDVVQELERRRRIADSLRWDFALMDHDHRGSIHVRDAQTLFRIRLPPHTAQGAWDRFVAQRTTKDARVSLTEIEELIVSETVSSSEFSLPKASETQVEIDSTRGRIRRPSVNPDEIIRSLRDQYGGSESRAAAERDRQDAAARERLEGRRGKRGDNLTGAARLLADAGKQHSDLESRLAEERGRQDDKVKARLAQKKIKRNAESNTNIDAIEAADMAIDLNADDDNGGADGHDDHGTSLAREESEDVGVSAEAGAGVASGDGRRRVERSGPSDADRDAVLANLKGRRDKDMTEKERQDALLEERLRSRQAKRDDTIVGASSVLSAAERDRLAKEGANASEKEKQEEKIREKLARLKSRKKDRASSAHGDGGGSGNDSAHSDDASASASESDGKAVNNNDSGSDGGDSGDNSGVDGTREGRPRTAAKNRTAEEMEAEKDRVMEGLKAQMDGAESRAAKEKDRQDAAVRERLSRRKTQKEDSMIATTAVLTEAERQKAGLAQTVAKEKEKQDEKMRARLAARRKKEAAVGAHASDDDSDDADDAQGTHRQEAAQGAASHAHATENDTTEASTAHATQNNNDNAEKESLVESNVGTVAAVEGTAARRGSRPLSSREKSMEETEMEKEELLATMRRQQTDLERKVHGDRERQDSASRQRLEQRRNEKGDKLVKANNVLTQGQREKSDLADSLEGEKARQESKLNQKIEERKKKKRESTMDAGEGAEAQ* # ORIGINAL: g794.t1 original gene structure, not modified by PASA NODE_1216_length_12966_cov_38.5408 AUGUSTUS gene 4062 6328 . - . ID=g794;Name=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS mRNA 4062 6328 . - . ID=g794.t1;Parent=g794;Name=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 6181 6328 . - . ID=g794.t1.exon1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 6181 6328 . - 0 ID=cds.g794.t1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 5794 5871 . - . ID=g794.t1.exon2;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 5794 5871 . - 2 ID=cds.g794.t1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 5456 5538 . - . ID=g794.t1.exon3;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 5456 5538 . - 2 ID=cds.g794.t1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 5066 5177 . - . ID=g794.t1.exon4;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 5066 5177 . - 0 ID=cds.g794.t1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 4659 4768 . - . ID=g794.t1.exon5;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 4659 4768 . - 2 ID=cds.g794.t1;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS exon 4062 4169 . - . ID=g794.t1.exon6;Parent=g794.t1 NODE_1216_length_12966_cov_38.5408 AUGUSTUS CDS 4062 4169 . - 0 ID=cds.g794.t1;Parent=g794.t1 #PROT g794.t1 g794 MNEGDLSDSARERRIDDLRDTLSAFDISGGSGPVAASAAAHVMARIQNEGGANTDSIIGSPVARSRRPSTGLSWPSVGALQRRSDTPVENERRLQRMSAAVKELLICIGEDPDREGLQQTPLRMAKALLFFTKGYQEIPAEVMNNAIFEEDHDEMVIVKNIDVFSMCEHHMVPFIGKLLTNHVDGHQHWRTGHTAAWSPSRAARAVVTAAPA* # PASA_UPDATE: g12869.t1, single gene model update, valid-1, status:[pasa:asmbl_2785,status:12],[pasa:asmbl_2786,status:12], valid-1 NODE_1845_length_8943_cov_57.0977 . gene 251 2439 . + . ID=g12869;Name=g12869.t1 NODE_1845_length_8943_cov_57.0977 . mRNA 251 2439 . + . ID=g12869.t1;Parent=g12869;Name=g12869.t1 NODE_1845_length_8943_cov_57.0977 . five_prime_UTR 251 251 . + . ID=g12869.t1.utr5p1;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . exon 251 328 . + . ID=g12869.t1.exon1;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . CDS 252 328 . + 0 ID=cds.g12869.t1;Parent=g12869.t1;5_prime_partial=true NODE_1845_length_8943_cov_57.0977 . exon 552 1077 . + . ID=g12869.t1.exon2;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . CDS 552 1077 . + 1 ID=cds.g12869.t1;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . exon 1387 1575 . + . ID=g12869.t1.exon3;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . CDS 1387 1575 . + 0 ID=cds.g12869.t1;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . exon 2023 2129 . + . ID=g12869.t1.exon4;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . CDS 2023 2129 . + 0 ID=cds.g12869.t1;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . exon 2382 2439 . + . ID=g12869.t1.exon5;Parent=g12869.t1 NODE_1845_length_8943_cov_57.0977 . CDS 2382 2439 . + 1 ID=cds.g12869.t1;Parent=g12869.t1 #PROT g12869.t1 g12869 TLDGANGDVNLDCATQSRTDLHCTYGVLSRNGLVVLDDTVGPEYTSDAWAWVAGAAKSEPPPNECALKDGAKRDCGYPGITRDTCVSRGCCFRASSALSAVMGVPQCFYAEYAQQDLYVLGHGRKYRTALSEFSLLSGEVPMPPRFAFGVWYSRYWAYSDSGLMELVQEYAAHNTPLDVLVTDMDFHLTFYKRADAGEKDQAGQQIGWTGFTWDPKLFPQPKKFLEWCKRRGLKNTVNIHPASGIQPWEEKYEQMALAMGIDPKSNKYVPFNITDTTFTEHWRDIVLRPMRDQGIDFFWLDWQQGEDWISIPGVNPTM* # PASA_UPDATE: g12871.t1, single gene model update, valid-1, status:[pasa:asmbl_2789,status:12], valid-1 NODE_1845_length_8943_cov_57.0977 . gene 6744 8903 . + . ID=g12871;Name=g12871.t1 NODE_1845_length_8943_cov_57.0977 . mRNA 6744 8903 . + . ID=g12871.t1;Parent=g12871;Name=g12871.t1 NODE_1845_length_8943_cov_57.0977 . five_prime_UTR 6744 6829 . + . ID=g12871.t1.utr5p1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . exon 6744 6958 . + . ID=g12871.t1.exon1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . CDS 6830 6958 . + 0 ID=cds.g12871.t1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . exon 7196 7297 . + . ID=g12871.t1.exon2;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . CDS 7196 7297 . + 0 ID=cds.g12871.t1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . exon 7679 7782 . + . ID=g12871.t1.exon3;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . CDS 7679 7782 . + 0 ID=cds.g12871.t1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . exon 8067 8262 . + . ID=g12871.t1.exon4;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . CDS 8067 8262 . + 1 ID=cds.g12871.t1;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . exon 8695 8903 . + . ID=g12871.t1.exon5;Parent=g12871.t1 NODE_1845_length_8943_cov_57.0977 . CDS 8695 8903 . + 0 ID=cds.g12871.t1;Parent=g12871.t1;3_prime_partial=true #PROT g12871.t1 g12871 MAHQHRESISSSVVPCPWTKERTEKAYVKDVDQYRELYKRSIEDPSGFWGDIASEFHWERKWDSVHSHSYDMTDGKQVYVRWFEGGKTNICYNVLDRNVNERSLGDNIAFHWEGNDDGEQKSITYRELLVEVCKFSNVLKSKGVRKGDRVVVYLPMVFELAIATLSCARIGAIHSIVFGGFSAEALASRIVDSQAKIVITAGASLQYVTMAHNTHTHTHTHTHTHTHTYTHIHTHTHTYTHIHTHT # PASA_UPDATE: g12870.t1, single gene model update, valid-1, status:[pasa:asmbl_2787,status:12],[pasa:asmbl_2788,status:12], valid-1 NODE_1845_length_8943_cov_57.0977 . gene 2641 6206 . + . ID=g12870;Name=g12870.t1 NODE_1845_length_8943_cov_57.0977 . mRNA 2641 6206 . + . ID=g12870.t1;Parent=g12870;Name=g12870.t1 NODE_1845_length_8943_cov_57.0977 . five_prime_UTR 2641 2645 . + . ID=g12870.t1.utr5p1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 2641 2732 . + . ID=g12870.t1.exon1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 2646 2732 . + 0 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 2873 2899 . + . ID=g12870.t1.exon2;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 2873 2899 . + 0 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 3242 3432 . + . ID=g12870.t1.exon3;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 3242 3432 . + 0 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 3703 3793 . + . ID=g12870.t1.exon4;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 3703 3793 . + 1 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 4052 4103 . + . ID=g12870.t1.exon5;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 4052 4103 . + 0 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 4358 4660 . + . ID=g12870.t1.exon6;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 4358 4660 . + 2 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 5048 5670 . + . ID=g12870.t1.exon7;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 5048 5670 . + 2 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . exon 5899 6206 . + . ID=g12870.t1.exon8;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . CDS 5899 6105 . + 0 ID=cds.g12870.t1;Parent=g12870.t1 NODE_1845_length_8943_cov_57.0977 . three_prime_UTR 6106 6206 . + . ID=g12870.t1.utr3p1;Parent=g12870.t1 #PROT g12870.t1 g12870 MFGKDAVPNNGKRPMVFHRWGGLGNHRYPIGFSGDVVPTWESLTFQPQFTATSSNVLYAYFSHDIGGHTAPSPAELYTRWVQWGIFSPIFRTHCTKNANNDRRIWTYPLENFKIMRDAIRLRAALVPYIYTYARVTYESAVGLLRPMYYDYPEDDKAYTVPGQFMFGDSLLVAPITTPADGATQLSTKSVWFPPANMTASGATVASSFLNWQTGEEFQAGQTIEGSYALNEMAVYAKGGAIIPMQVEKGLDGFGKAQNLPTTLRLDVFPSSSRTSFDLYEDDGVASDYMSTGTHAWTRITQELVDGSSNFLLSISAPFGTKEDERNSESVRVGSSSSPSSFSFLPGRRGFEVHIRNVWPATAVRIAENAEETVFDMRRNGGDVPYVSIDGPESEDANGWTYDGNTLTLIVFVGARDIGEGLSLSVSFDGDVASSPLLRGDFVRLVGRFIRAKQTLDDQWGVHTVYMDDYPNLLLAAEAGNRITYSPDTAKAELTSFAALVSAARDEVNNLSMDASVKKVLLAQLFG* # PASA_UPDATE: g11695.t1, single gene model update, valid-1, status:[pasa:asmbl_1676,status:12], valid-1 NODE_1464_length_11130_cov_52.4754 . gene 4626 6662 . - . ID=g11695;Name=g11695.t1 NODE_1464_length_11130_cov_52.4754 . mRNA 4626 6662 . - . ID=g11695.t1;Parent=g11695;Name=g11695.t1 NODE_1464_length_11130_cov_52.4754 . five_prime_UTR 6467 6662 . - . ID=g11695.t1.utr5p1;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . exon 6213 6662 . - . ID=g11695.t1.exon1;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . CDS 6213 6466 . - 0 ID=cds.g11695.t1;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . exon 5775 6006 . - . ID=g11695.t1.exon2;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . CDS 5775 6006 . - 1 ID=cds.g11695.t1;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . exon 4903 5605 . - . ID=g11695.t1.exon3;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . CDS 4903 5605 . - 0 ID=cds.g11695.t1;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . exon 4626 4795 . - . ID=g11695.t1.exon4;Parent=g11695.t1 NODE_1464_length_11130_cov_52.4754 . CDS 4626 4795 . - 2 ID=cds.g11695.t1;Parent=g11695.t1 #PROT g11695.t1 g11695 MLRIKLRRHRHAVIAVCSFASFALCALVAHRFLWEMEGNSSLPPVVLIHGYKASHLRDATTGDRAWLTARQALTPWNESIALPINWKEENGRWVQDGDALVADGCIRSVGASIFKRSVYDKFFHTMERQKRDMNEFSYDWRRNPEENARKFLAFLEDLAKIKGAPLQIVAHSMGGLVTLAAMNMLHDHIAAGERPSSSLKAVFNSVLFVGVPFHRRVTFLEDLHKGSMIGLNSHIISYHVQATFTSVYTLFPLDGRGLVDAPAVSSAHPYAPEDAIKGDHAPVDADQPTRYDPFDIHFWKSHNLSIFRDDSPYPRDAAETHMTHALASAKHFVMAYIVARKDVEYPPLGALVGSGQPTTIAVVRNGPKAFKGFDFVSAPKGDGDGRMLPEDAFPPEGLKFTRYDTRFKHGDLLSDTPVILEAINALCVAGSVWTGAANGGNATGDGAPHPQM* # PASA_UPDATE: g11696.t1, single gene model update, valid-1, status:[pasa:asmbl_1677,status:3], valid-1 # PASA_UPDATE: g11696.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1678,status:3], valid-1 NODE_1464_length_11130_cov_52.4754 . gene 6875 10813 . + . ID=g11696;Name=g11696.t1 NODE_1464_length_11130_cov_52.4754 . mRNA 6875 10813 . + . ID=g11696.t1;Parent=g11696;Name=g11696.t1 NODE_1464_length_11130_cov_52.4754 . five_prime_UTR 6875 7003 . + . ID=g11696.t1.utr5p1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 6875 7132 . + . ID=g11696.t1.exon1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 7004 7132 . + 0 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 7332 7482 . + . ID=g11696.t1.exon2;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 7332 7482 . + 0 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 7697 7806 . + . ID=g11696.t1.exon3;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 7697 7806 . + 2 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 8067 9149 . + . ID=g11696.t1.exon4;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 8067 9149 . + 0 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 9426 9571 . + . ID=g11696.t1.exon5;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 9426 9571 . + 0 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 9893 9982 . + . ID=g11696.t1.exon6;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 9893 9982 . + 1 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 10155 10317 . + . ID=g11696.t1.exon7;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 10155 10317 . + 1 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . exon 10498 10813 . + . ID=g11696.t1.exon8;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . CDS 10498 10785 . + 0 ID=cds.g11696.t1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . three_prime_UTR 10786 10813 . + . ID=g11696.t1.utr3p1;Parent=g11696.t1 NODE_1464_length_11130_cov_52.4754 . mRNA 6875 10813 . + . ID=g11696.t1.1.5b6be70a;Parent=g11696;Name=g11696.t1 NODE_1464_length_11130_cov_52.4754 . five_prime_UTR 6875 7132 . + . ID=g11696.t1.1.5b6be70a.utr5p1;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . five_prime_UTR 7332 7482 . + . ID=g11696.t1.1.5b6be70a.utr5p2;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . five_prime_UTR 7697 8006 . + . ID=g11696.t1.1.5b6be70a.utr5p3;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 6875 7132 . + . ID=g11696.t1.1.5b6be70a.exon1;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 7332 7482 . + . ID=g11696.t1.1.5b6be70a.exon2;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 7697 9149 . + . ID=g11696.t1.1.5b6be70a.exon3;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . CDS 8007 9149 . + 0 ID=cds.g11696.t1.1.5b6be70a;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 9426 9571 . + . ID=g11696.t1.1.5b6be70a.exon4;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . CDS 9426 9571 . + 0 ID=cds.g11696.t1.1.5b6be70a;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 9893 9982 . + . ID=g11696.t1.1.5b6be70a.exon5;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . CDS 9893 9982 . + 1 ID=cds.g11696.t1.1.5b6be70a;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 10155 10317 . + . ID=g11696.t1.1.5b6be70a.exon6;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . CDS 10155 10317 . + 1 ID=cds.g11696.t1.1.5b6be70a;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . exon 10498 10813 . + . ID=g11696.t1.1.5b6be70a.exon7;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . CDS 10498 10785 . + 0 ID=cds.g11696.t1.1.5b6be70a;Parent=g11696.t1.1.5b6be70a NODE_1464_length_11130_cov_52.4754 . three_prime_UTR 10786 10813 . + . ID=g11696.t1.1.5b6be70a.utr3p1;Parent=g11696.t1.1.5b6be70a #PROT g11696.t1 g11696 MADSRDQSEASAVDGVPTTPSSAVGKVAAASEDKSPVSSKQCNESTPVIPRVFMRSLAFIYLAAFASLYVQLPGLYGRNGILPVESLLRRRENGTAFDPNEPLQSKMYSMPTLLWITRDFGITTEAALDMLCLVGMAVSFLGVLGATVLPVFAVLWGLYLSVFSVGETFLSFQWDILLLEAGFLTLVMAPLVRATRVNAYRAGVGMFLARWLLFRLMFQSGILKLTGGDRSWWGLTAMDWHYESQCLPTPLAWIAAQLPAHVHRFETVMTFAIEGVLPWLFLVPAWKGTEAARLLSGAAQAGLMVVVMATGNFTFFNLLTCVLCISCVDERTARRICKRGVWGIVPRKRTRRTVFLLSIVASIAFLVYATVKLFDCRVDLEDTADTFKARVAFTLEWLNKVAAPASVRAALALATTEFAVVGLLPVVLYPVFARLKSARIRSSGVAGAAGHAVTWAWHGVFLAAAGFIFVVSVVPFVFSLDKPTGQALRPEVLDAYRVSAPLNIANSYGLFRSMTGVGGRPEVVIEGAGSDGVWREYDFRYKPGNVSASPLFVMPHQPRLDWQMWFAALGSYGNNPWFISLVHRLLTNEPTVTALLARNPFPDTPPKQIRATHYTYHYTRQVPGKAPPPAWWWRESPREYLPPLSLDVENFRAYIQKNGWESTELSHETLVGGALTTVRSVLHSASTTLPYYLDDNLAVACALSTLVILITRKMVLGHW* #PROT g11696.t1.1.5b6be70a g11696 MHTHTHACAYNDAKQTHTSQLCLVGMAVSFLGVLGATVLPVFAVLWGLYLSVFSVGETFLSFQWDILLLEAGFLTLVMAPLVRATRVNAYRAGVGMFLARWLLFRLMFQSGILKLTGGDRSWWGLTAMDWHYESQCLPTPLAWIAAQLPAHVHRFETVMTFAIEGVLPWLFLVPAWKGTEAARLLSGAAQAGLMVVVMATGNFTFFNLLTCVLCISCVDERTARRICKRGVWGIVPRKRTRRTVFLLSIVASIAFLVYATVKLFDCRVDLEDTADTFKARVAFTLEWLNKVAAPASVRAALALATTEFAVVGLLPVVLYPVFARLKSARIRSSGVAGAAGHAVTWAWHGVFLAAAGFIFVVSVVPFVFSLDKPTGQALRPEVLDAYRVSAPLNIANSYGLFRSMTGVGGRPEVVIEGAGSDGVWREYDFRYKPGNVSASPLFVMPHQPRLDWQMWFAALGSYGNNPWFISLVHRLLTNEPTVTALLARNPFPDTPPKQIRATHYTYHYTRQVPGKAPPPAWWWRESPREYLPPLSLDVENFRAYIQKNGWESTELSHETLVGGALTTVRSVLHSASTTLPYYLDDNLAVACALSTLVILITRKMVLGHW* # ORIGINAL: g11694.t1 original gene structure, not modified by PASA NODE_1464_length_11130_cov_52.4754 AUGUSTUS gene 1905 4072 . + . ID=g11694;Name=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS mRNA 1905 4072 . + . ID=g11694.t1;Parent=g11694;Name=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS exon 1905 1946 . + . ID=g11694.t1.exon1;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS CDS 1905 1946 . + 0 ID=cds.g11694.t1;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS exon 2108 2287 . + . ID=g11694.t1.exon2;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS CDS 2108 2287 . + 0 ID=cds.g11694.t1;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS exon 2576 2854 . + . ID=g11694.t1.exon3;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS CDS 2576 2854 . + 0 ID=cds.g11694.t1;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS exon 3050 4072 . + . ID=g11694.t1.exon4;Parent=g11694.t1 NODE_1464_length_11130_cov_52.4754 AUGUSTUS CDS 3050 4072 . + 0 ID=cds.g11694.t1;Parent=g11694.t1 #PROT g11694.t1 g11694 MVPCLCVCLYISVWAGEEALRTYANHEAVKFFSLAKRKLPKRQRMTGAEPSKIERVQIELSLAEAHIRLGDHPQSKLHCEDALRIMDQPLPSSKPNTLKQEKFKSTITRTFTQSMRFLGIGELNEDAGAEAAKAYMRLASLHYTSWEIDQCVNACMKAVNCAEVSGKAPEIARAYASLTFACRMTGSEQLATKYAQRALETSQTVPHPPTWGYVFHLTGLAAVTVGEWRAVKANLDHSLEVFGQLSDWRRWCEVAQLFTLINHHQGKYREALRLGVTLLRCARMHDDTESQLWGMLSQCRANIMLGVATEATRLIEDAAELIGRLKSRVSPSLHLEVAAMGALIALGNKDVAKACRLIDSIMRLEPSPSVYHLFFAFSAMIEACLELQSPRWDVKPMVKRDSYRDMAQKTAKLLQKLAKVFPIVFPLAQLRSGQVEAAAGNAKKAMGMFEEGLVQARALGLPHDRAALLLELGYLTQSMRDKTTLLSEAVATLTEIEAATPPKPDLG* # ORIGINAL: g11727.t1 original gene structure, not modified by PASA NODE_3412_length_3524_cov_38.8089 AUGUSTUS gene 369 3402 . + . ID=g11727;Name=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS mRNA 369 3402 . + . ID=g11727.t1;Parent=g11727;Name=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS exon 369 1199 . + . ID=g11727.t1.exon1;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS CDS 369 1199 . + 0 ID=cds.g11727.t1;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS exon 1545 1730 . + . ID=g11727.t1.exon2;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS CDS 1545 1730 . + 0 ID=cds.g11727.t1;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS exon 1968 2042 . + . ID=g11727.t1.exon3;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS CDS 1968 2042 . + 0 ID=cds.g11727.t1;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS exon 2251 2433 . + . ID=g11727.t1.exon4;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS CDS 2251 2433 . + 0 ID=cds.g11727.t1;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS exon 2677 3402 . + . ID=g11727.t1.exon5;Parent=g11727.t1 NODE_3412_length_3524_cov_38.8089 AUGUSTUS CDS 2677 3402 . + 0 ID=cds.g11727.t1;Parent=g11727.t1 #PROT g11727.t1 g11727 MALNPSAPEFRLPLESQPQQRTHSSSSSSQLMHTARNQSAEANNTVSGRGGRSGGRRGGGAGGKIDRHNGHGSVEAGGASGVAGGDLSGGGFGDRRRNDSGGKRGGSGRGNGGKSRMERRAEDDSFRSDAGGGGRDRRQNNWDAITNSNPAANGGGFGANRTRNDSERSVDSVDVALAVAASLGSPSRASGKKGAITHLLNFQYSSGRIGSGYGGGGSSAGLSSAPLARHRGRKVQRTYNKEHFVQAHCQFSVRDSGDYTSNLVDPDYPVEWDLIEEVHMFAHSEPVCPICLQHPSAGKTTRCGHVFCYSCILRYLSTADRSWKKCPICYEAVHQKDLKSVVVVVRPPVAVGDTVTFRLMRRPKTSIVCVPSALWDESLVVQPPSPSHAASGNFVKLLAVTPSDVLGAVITRERNELISQLGEATAAGETEDVAFIEQAMMSVNVRESKLTSAAGLSDLASKLSALDSSAYRTDRQQQQQQQQQQQQQQQQQQQQQQERAGGEQQARPSAVSLQRTLGEGSQGDRQSRGASGAAISMPPPKGRPTVRRERATYDDDASAAFYDVNPDAFSDNDMTGSESEGPDDEEADFARDSARDRSRVDVTEGEEAWYGDGSAEAEEGDLGVHARNGGSVVQSVQLHAADVTNSDVGSRVAAGARIGVDKGLVL* # PASA_UPDATE: g572.t1, single gene model update, valid-1, status:[pasa:asmbl_7756,status:12], valid-1 NODE_496_length_22436_cov_40.4924 . gene 19996 22300 . + . ID=g572;Name=g572.t1 NODE_496_length_22436_cov_40.4924 . mRNA 19996 22300 . + . ID=g572.t1;Parent=g572;Name=g572.t1 NODE_496_length_22436_cov_40.4924 . five_prime_UTR 19996 20248 . + . ID=g572.t1.utr5p1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 19996 20343 . + . ID=g572.t1.exon1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 20249 20343 . + 0 ID=cds.g572.t1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 20482 20673 . + . ID=g572.t1.exon2;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 20482 20673 . + 1 ID=cds.g572.t1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 20865 21058 . + . ID=g572.t1.exon3;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 20865 21058 . + 1 ID=cds.g572.t1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 21415 21494 . + . ID=g572.t1.exon4;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 21415 21494 . + 2 ID=cds.g572.t1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 21784 21852 . + . ID=g572.t1.exon5;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 21784 21852 . + 0 ID=cds.g572.t1;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . exon 22137 22300 . + . ID=g572.t1.exon6;Parent=g572.t1 NODE_496_length_22436_cov_40.4924 . CDS 22137 22300 . + 0 ID=cds.g572.t1;Parent=g572.t1;3_prime_partial=true #PROT g572.t1 g572 MALLDIMRTGRRGSSAPYVFAAALLWMAVLACSCAAFEFKLERALESYTEMEVQAMLGEFQTGFKAELDNNRSDNKYLLGEAMIPCNVCQDTLLELKTTPTVCNTACISAMHYGLLNFKGRKACDGLCDLLATFQLAYNPCYAVGVCEWERDATLPNYRPVVLMHGVNSDHTALYNVSSWIQEYLPNIYVHNVELGDGKFHSIFTTLDKQVEEFAAVVAADPMLAGGFNLLGFSQGTLITRGYIQKFNNPPVYNYVSFSGPQGG # ORIGINAL: g570.t1 original gene structure, not modified by PASA NODE_496_length_22436_cov_40.4924 AUGUSTUS gene 8122 14605 . + . ID=g570;Name=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS mRNA 8122 14605 . + . ID=g570.t1;Parent=g570;Name=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 8122 8249 . + . ID=g570.t1.exon1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 8122 8249 . + 0 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 8435 8795 . + . ID=g570.t1.exon2;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 8435 8795 . + 1 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 9529 9672 . + . ID=g570.t1.exon3;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 9529 9672 . + 0 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 9895 9980 . + . ID=g570.t1.exon4;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 9895 9980 . + 0 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 10232 11036 . + . ID=g570.t1.exon5;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 10232 11036 . + 1 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 11252 11447 . + . ID=g570.t1.exon6;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 11252 11447 . + 0 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 11638 11776 . + . ID=g570.t1.exon7;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 11638 11776 . + 2 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 11899 11996 . + . ID=g570.t1.exon8;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 11899 11996 . + 1 ID=cds.g570.t1;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS exon 12240 14605 . + . ID=g570.t1.exon9;Parent=g570.t1 NODE_496_length_22436_cov_40.4924 AUGUSTUS CDS 12240 14605 . + 2 ID=cds.g570.t1;Parent=g570.t1 #PROT g570.t1 g570 MAARTLSRHCQFTVSVTTAVALVFALSLFACISGTSAAAASKIISDALPYWGQFVAHDITLTKGGSESFPIPVPTCDYQFDPKCTGTQTIGFSRGARSRDANGAWTHLNMITSFVDGSGVYGATDDRANAIRTFSDGKMNMSTGELPPFNVPELEQANAQNAKSLHTVFLREHNRKVTELKTANPSWTDQHLYDYGRAWVAALLQKITFDDYLPPLLGKRLPAYTGYNASIDPRIDIFFTVAAFRYGHSAINMLIPRINADGTTHAAGHLLLRDGRWNMQPLQSHGIEPILRGLGQQIESAVDNRVVSDMRNAFDLGDYFDIVSFNIQRGRDAGLPSHNDMRVYFGLPRIQNFTHLTGGDAESADILASLYPTIDDVDPWVAGLSEPESPGALLGALFAASMEDQFRRLRDGDRFYYEAGNLPLSADEIAEVHRTRMSDVIKRNFLAPVGTGLVSGDLFRKQPSPLESSGTSATADGTYAFSAKLNTKILLEWTIRDIKWLDARITYQGTGWVGIGLGTKTMPKSDIILGYVEDGTGKVVIEDRYASDNALPDTDVSLGYADDITNINGSQISGVTVLIFSRLLKTGDPLDYAIVEGTAAPVIFAFSTTDSLGYHGQDNRAIATIDFYTGQVTCGNAASMPFNVYAFHGGLMGIVFCIAYPLGILVARYGKSYKLWLAVHAEIMLFGASDVLILVAVALSGSHDSAAHAISSHGIIGLLIAVCIAIQVILGLTAKFFMKKSSATCTSKIVRTGHMVLGYAMLILGLINANKGISKLLIGDDYAKDKDIALGIYYAWVSVITATFLILEANRFYIAHGHRIGFSKVAPSDHTPMTRSKSQAEMRAYTWKDISERVSNDSAHLFVINRIVYDLGDWVSVHPGGERILLAAVGTDITREFMGVALAKVESREYLLDDGEDVGGGKLGWMARLFNSANAPGGDYKGGVMPVSPKATPPPPLRRRSSSVIKNRAEPQPVHVHSGMAWRALRNFAVGRLLDSENGISLDHASNAGPPTLKRGGTSKSMVSVGSNFEEFARYTLVSKRTLTHPSAVEVVSLFRFAIEPDSSLAKAQVLTGQHVIIHALINGRSLQRSYTLVGYSAQEGLLELAIKIYPEGLLSSHLDQIAVGASVKMRGPLGHQLLCKTPIAKTFDGCWDHVGMIAGGAGITPFINLISHHVKKGPHKTRKGMSCNLLFANSTALDVFYGERLADMADETDGYFKVFHILSRPPAEWDGMSGRITTEAIRISMPPPPGDTESALKSRLRSDSIPSSNINLFGRHKSLMGLWKEAKREDDSDTAAADGNAGTVIVTTGGDILQEEGESPPQPLDEEQGGAVDKKSSSSSRSVPNAPEANAPEDAQAAPAVVVTTSAPALPPPDKSNGVAFQRHEPDLWEIDSTFDAQTNIPVTTENMRIFVCGTVAFNAHVISLLREMGYPQEVVVVL* # PASA_UPDATE: g571.t1, single gene model update, valid-1, status:[pasa:asmbl_7755,status:3], valid-1 NODE_496_length_22436_cov_40.4924 . gene 16355 18840 . + . ID=g571;Name=g571.t1 NODE_496_length_22436_cov_40.4924 . mRNA 16355 18840 . + . ID=g571.t1;Parent=g571;Name=g571.t1 NODE_496_length_22436_cov_40.4924 . five_prime_UTR 16355 16636 . + . ID=g571.t1.utr5p1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . exon 16355 17258 . + . ID=g571.t1.exon1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . CDS 16637 17258 . + 0 ID=cds.g571.t1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . exon 17381 17727 . + . ID=g571.t1.exon2;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . CDS 17381 17727 . + 2 ID=cds.g571.t1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . exon 17840 17968 . + . ID=g571.t1.exon3;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . CDS 17840 17968 . + 0 ID=cds.g571.t1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . exon 18103 18840 . + . ID=g571.t1.exon4;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . CDS 18103 18237 . + 0 ID=cds.g571.t1;Parent=g571.t1 NODE_496_length_22436_cov_40.4924 . three_prime_UTR 18238 18840 . + . ID=g571.t1.utr3p1;Parent=g571.t1 #PROT g571.t1 g571 MGCGASKAPVVEPKVTEVKPAKGSSKQTDAPVSRESSKVMGSTSSLRKAVQKKKADEDISSSRSRVSSSDKDKKSTSEKKGSSKDSKDVKRSSSRRSVAHSDSEDDGVVAAPRGNSNKNSRDGSAASSKSSSKTSSAKARKTEEMDSGNEEERESSANRKKRQASAQSNSSNADSGFGDEDDGMKNVITEDHSRSAEVAKANRPPTPEFMLEGRQVGSGKGDRDRVDREGSGKKKASFAKGTKNVQREDRDELPPRCESRGGCAFDIELDDDETPTRSKTPMGMLPSLQPPPSVRRKLAPIKARPMTQEELESKQQAAEDRRKRREREVIERLEARKQAAAQVQNALDSFVTKETSKAETIEQKLQASQENREEHLRQLRDRLRAKEKHAEEVRRQKREQKAVAAGGDDF* # PASA_UPDATE: g569.t1, single gene model update, valid-1, status:[pasa:asmbl_7752,status:12], valid-1 NODE_496_length_22436_cov_40.4924 . gene 163 6338 . + . ID=g569;Name=g569.t1 NODE_496_length_22436_cov_40.4924 . mRNA 163 6338 . + . ID=g569.t1;Parent=g569;Name=g569.t1 NODE_496_length_22436_cov_40.4924 . five_prime_UTR 163 164 . + . ID=g569.t1.utr5p1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 163 534 . + . ID=g569.t1.exon1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 165 534 . + 0 ID=cds.g569.t1;Parent=g569.t1;5_prime_partial=true NODE_496_length_22436_cov_40.4924 . exon 989 1623 . + . ID=g569.t1.exon2;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 989 1623 . + 2 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 1850 2020 . + . ID=g569.t1.exon3;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 1850 2020 . + 0 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 2225 2344 . + . ID=g569.t1.exon4;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 2225 2344 . + 0 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 2634 2838 . + . ID=g569.t1.exon5;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 2634 2838 . + 0 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 3363 3534 . + . ID=g569.t1.exon6;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 3363 3534 . + 2 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 3743 4284 . + . ID=g569.t1.exon7;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 3743 4284 . + 1 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 4776 4941 . + . ID=g569.t1.exon8;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 4776 4941 . + 2 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 5256 5504 . + . ID=g569.t1.exon9;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 5256 5504 . + 1 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . exon 5985 6338 . + . ID=g569.t1.exon10;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . CDS 5985 6273 . + 1 ID=cds.g569.t1;Parent=g569.t1 NODE_496_length_22436_cov_40.4924 . three_prime_UTR 6274 6338 . + . ID=g569.t1.utr3p1;Parent=g569.t1 #PROT g569.t1 g569 CAVALTGNCPTTLTSGYFGTIKYPGGYSATCELTKDANANIALSVSAAGEIPAMSAAVSLACQGSQVAMRIAGGAVLYGVFQTSTRRFDLGFVSLFASCPTSLGGDLLSGNDTNSFAALRMIQNADCVNFQTVTNAISLLGMERCSSLPYLAFRFSTDTSLPTVTATSSNGLQFYVAGSNLSDVSGFASIRNVTSINLNCETNQSPFLMPRLEMLTSLTFVSGGFSFGGSASAVGGYFTSPPALKVVGGLFLGNLDGFYGFDSLEKIEPSGMYMSGLVVRQLPNFNNLVSIKGNVDISSFPSLIVLPEMASLRLVDGTVSISKSPNLCVPENHPLLKYATGAVTITGVKNPNATECIVSRLGFGTVNASSPASVKDTLTGLTNVLADANWTTSDALPAGKAVTTVVKTLASTVTAIRSPRFFESQTTLTISEASASILRTVNTLLDADTLPILKNNSVSSSIASITDTFAFAIAASNSSCDQRSSGGSLQSEWVYLRPVKAPPQEIGGVLSFDSPDNLRHAITIPSSINSVIPATATCVVSSFVVFRTNPFAPAAPQDVRSNILSLSLENITVRGLAEPITFTVSLKNASASEVAFLRCSWWDEASLSFKTDGCRALSRSVDEVTCACNHLTSFAVLFDVSGGDLSASEENILSIMTYIGCGISIAGCILTVVTYVFVPRLRTGPSVLVMNLCIALLAVNIIFLSAIDKTSNEAGCKTAAILLHFALVSAFAWMALIGVNVYQNVVRVSIGSTFGAVSWRTYAIGWGIPFVFVGITVIVDAGTQGDVEYGNDTRCWISSRGGLIGAFVVPVGLVIVGNVFIFGLATRALILAARQRSEMSGTIRDLKKEVVIFLSLLTILGGTWIFAYLAMFEKGFWYPFVILNSLQGAFICVAYTLRGRVYQAWKEKLMDMSAITTSQIASSKNATSNTSGGISSSGHSAGRKGRNQSSADLDAYVEMEAVNFQHRGSILA* # ORIGINAL: g10607.t1 original gene structure, not modified by PASA NODE_1638_length_10069_cov_50.1718 AUGUSTUS gene 6533 9705 . + . ID=g10607;Name=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS mRNA 6533 9705 . + . ID=g10607.t1;Parent=g10607;Name=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 6533 6727 . + . ID=g10607.t1.exon1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 6533 6727 . + 0 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 6854 6981 . + . ID=g10607.t1.exon2;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 6854 6981 . + 0 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 7181 7409 . + . ID=g10607.t1.exon3;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 7181 7409 . + 1 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 7589 7687 . + . ID=g10607.t1.exon4;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 7589 7687 . + 0 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 7885 7972 . + . ID=g10607.t1.exon5;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 7885 7972 . + 0 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 8153 9174 . + . ID=g10607.t1.exon6;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 8153 9174 . + 2 ID=cds.g10607.t1;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 9484 9705 . + . ID=g10607.t1.exon7;Parent=g10607.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 9484 9705 . + 0 ID=cds.g10607.t1;Parent=g10607.t1 #PROT g10607.t1 g10607 MKALAVVDDNGMAVFVDGGDEYPGIETDELLFPPFAIMQSVMKYTFGSCFSSVKCGDGALLVFEKSEDFNLVGIGHDGETEAYIARQLRMFRDLVFFRHGPRMDLVRKNARSLRPSLLGLSRTVRHVHMSEQAFLVQATERADVNPFIRASCARAVENAVNSLPRGINVHQAVITMDSKARHTPLLYHYQRRGGMELHTQDMASLLVYVRSLLHPTEFATTAHAEKTATPSHDHPDSPNGAAGTPSGSNQTRHHNRSQSLEDEFVLASEDLSPETATPATTRPQSRDSPIDASASAPALGHSDTGSSPWSRISPAQPGSAADDTTAQSVSAASLSSSDNRTQIPAAAPGAPESGRPGEESHTQGALGNLDEEDEDASAEHPSPRVRSPNLSAAVDVGVMGAGDGAGRRHWRTARADSSDSRSGDDSSDIDGDSDIDELPFSSPSGTPQPSTPLSTTPRRGLPFPGVGEFPVGAAGVRTLGRESGMRLDASLSRSMPSVADGSSSAAHQGYVSAVQSLGSSAVSIRASSMMDLRGSAGTFVSPPTIADDVCPAVCETLFFRSPNLKPYLVFCGNVAPSTVLVIVCDQPKSGKPSTATFDEAHKRVQAVLSDFADFLAVKCSWNVPVFPYPKLSPGHRFYFDVCASRHTLFLAFIFRRKFLP* # ORIGINAL: g10606.t1 original gene structure, not modified by PASA NODE_1638_length_10069_cov_50.1718 AUGUSTUS gene 432 5673 . - . ID=g10606;Name=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS mRNA 432 5673 . - . ID=g10606.t1;Parent=g10606;Name=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 5331 5673 . - . ID=g10606.t1.exon1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 5331 5673 . - 0 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 4756 5186 . - . ID=g10606.t1.exon2;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 4756 5186 . - 2 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 3934 4069 . - . ID=g10606.t1.exon3;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 3934 4069 . - 0 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 3581 3699 . - . ID=g10606.t1.exon4;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 3581 3699 . - 2 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 3305 3457 . - . ID=g10606.t1.exon5;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 3305 3457 . - 0 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 3008 3120 . - . ID=g10606.t1.exon6;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 3008 3120 . - 0 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 2617 2758 . - . ID=g10606.t1.exon7;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 2617 2758 . - 1 ID=cds.g10606.t1;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS exon 432 2324 . - . ID=g10606.t1.exon8;Parent=g10606.t1 NODE_1638_length_10069_cov_50.1718 AUGUSTUS CDS 432 2324 . - 0 ID=cds.g10606.t1;Parent=g10606.t1 #PROT g10606.t1 g10606 MNKNASVGDIGGDAVPEALPTDDLVNLPELSEDTLLDALRDRFQRGAIYTYVGTILISVNPFRFLHIYNPKFVKAYMGRRIGELPPHIFAIADDAYHNMMQAKANQCIVISGESGAGKTQATTFLVHHLTTLSCKGKHSAIEQHILGAGPLLEAFGNAKTIRNNNSSRFGKFIEIHFTEFGVMNGGRVIKYLLEKSRIVRQAESERNFHVFYQLLAGATDKERMDLMLTGPESYRYLNQSKCYSLDGVRDKDEFEVLKQSMDSLNFSSDLQTSMWRLLAAVLWTGNIDFGKDDHDNATVASAAVAQKVAQLLEVRLEDLCAALTTKTSVTRGEKIQTPLNPHDAESTRDAMAKALYGKLFDYLVDAINGVMVTKANQKGNTIGVLDIFGFEDFQVNSFEQFCINFANEQLQQYFNQHVFRLEQEEYRRVRLLQENISWSSVHFTDNQDCLDLIVKRPTGLLCLLDEESSFPKATDTTLLAKFDQAHPSHPCYIKPIQRRSYFTIAHYAGRVSYEMEGFLEKNRDLMRADIVTLFRRSAAPLLKRMFAREGSTRSHWVGVRWYFRVVAAFRSSLVAGAAVPRRSIAATMRPPRAMSVIDAGPASPMPPGAGKKTLAKSFSVTGEQPPTHTPNSPAPGTPGTQRALTATTSHTAGSVASPSTRKHGTMSGSRPNLGGSRRAFTVGAQFESSLQQLLRTLNSASPYFVRCIKSNNGKNPSEFDTEFVLRQLRYTGMLDTIRIRQMGYNVRIAFAEMMRRFRVIMLPELARRKLPTGTAGDIAMDRALVQQFLTRTGLPKDKFLLGATKVFMRDPEHLQLQKMLHAHVSAAASKLQRWAKGVVARKRFVRARAAAIVIQRAFRAKRARERMFKQRLRSEAAGVIQRWYRGRKGREAFARLRAAVVRVQAMVRGFRARRAVKALRNSNSAPEARLRVASLATHPNLSRSASTSAANRSLASSSSAAQIGEARNGELDDALAELDFLSAHLDGLSSEADALADSLGSASSSAAGSRISAGEQIELAGFRPAEGNRILHKGHGLSSSGGSGVLARKNNIPSPSTPATAGSPVATPTKAPPIGDAVAVAMPTPVVVQSERRTVVANVTSESKSELLL* # PASA_UPDATE: g5189.t1, single gene model update, valid-1, status:[pasa:asmbl_4213,status:12], valid-1 NODE_2396_length_6426_cov_39.7851 . gene 2280 6240 . + . ID=g5189;Name=g5189.t1 NODE_2396_length_6426_cov_39.7851 . mRNA 2280 6240 . + . ID=g5189.t1;Parent=g5189;Name=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 2280 2498 . + . ID=g5189.t1.exon1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 2280 2498 . + 0 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 2781 3068 . + . ID=g5189.t1.exon2;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 2781 3068 . + 0 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 3395 3529 . + . ID=g5189.t1.exon3;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 3395 3529 . + 0 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 3972 4771 . + . ID=g5189.t1.exon4;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 3972 4771 . + 0 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 5090 5366 . + . ID=g5189.t1.exon5;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 5090 5366 . + 1 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 5520 5812 . + . ID=g5189.t1.exon6;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 5520 5812 . + 0 ID=cds.g5189.t1;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . exon 6063 6240 . + . ID=g5189.t1.exon7;Parent=g5189.t1 NODE_2396_length_6426_cov_39.7851 . CDS 6063 6240 . + 1 ID=cds.g5189.t1;Parent=g5189.t1 #PROT g5189.t1 g5189 MAGNENDARHTPSVHYGVINKRKEAGMLDQLQLTKADNVRFVIVKRIESTAGLLYYFPTDIGNASFIAASVLPNPDKAIERITAQAAAKKTKAHAGVLRLDEWYIDSVQGRSDTFKLRHRMNGAKKFIFTTVTVTDDAFGILPAPDSPALEQGVYSQFNHACDLQSIIQLAATDVGGANRLMRHTSEGAMTRKRQQSGNIEAARLAISRVKSEEFGSPKTKDRSEAMRVASLHAQELEAMKHWRVVNHALQNSSPTVGTLDFAIFHLLTTYPFAANIIHMIAKCGLSRCLGLLELCPKIDYNLRDENGRVASDVARENGHKDLADELDRRCVCANCLHCESPAHKAIQDEHIDCFLALVRLGRVGGFDQQTPPIIVAVKACKMQILPELLRSGFDASACDQVRRTALHYAAERNTPANIEAMEILLHHLKMYRDDIGLREVAEMQDALGDTPAHVAARATNAEALRILLAHGIRVDVQNAENITPGDLLAEAAGDATEVRMMKSLCRQVVENHLFAKIEASALHLEKTKIGEGNFGTVRKGILSLADGSTVAIAAKFLKAGEEAEARTKTLELIREYETMCRKNLRHVNVVLCHGLADCGPEGLALVLELATEGSLEDWLRSHKFEDGTPQDQYSDRGRRIQTIRSEVLHSIGFQVASGMAFLASRALTHRDLAVRNIMVTLEPVAFVRERGWASLHGMPHSKSILEKLLDKTQESENGDLPLVATVRV* # PASA_UPDATE: g5188.t1, single gene model update, valid-1, status:[pasa:asmbl_4212,status:12], valid-1 NODE_2396_length_6426_cov_39.7851 . gene 345 1085 . + . ID=g5188;Name=g5188.t1 NODE_2396_length_6426_cov_39.7851 . mRNA 345 1085 . + . ID=g5188.t1;Parent=g5188;Name=g5188.t1 NODE_2396_length_6426_cov_39.7851 . five_prime_UTR 345 345 . + . ID=g5188.t1.utr5p1;Parent=g5188.t1 NODE_2396_length_6426_cov_39.7851 . exon 345 1085 . + . ID=g5188.t1.exon1;Parent=g5188.t1 NODE_2396_length_6426_cov_39.7851 . CDS 346 927 . + 0 ID=cds.g5188.t1;Parent=g5188.t1;5_prime_partial=true NODE_2396_length_6426_cov_39.7851 . three_prime_UTR 928 1085 . + . ID=g5188.t1.utr3p1;Parent=g5188.t1 #PROT g5188.t1 g5188 SRCFRLQVPAEGWQCLSTQGQGILCIRRKLCPHCSRRRPARSPSQGCQEGDKFANSAILIIDLAASSLINREGNAPVKGCCGWRVGCCLGRCRVFAGRRSILAVVIAMTARTMSSHSSTRLFFGDETHAGLLWSHVVTHRSRIYFSRDCDSGRLPLAVHTPLWFNGGRTHSPTWTLAAPFCTPLWTDKCAYCR* # PASA_UPDATE: g1508.t1, single gene model update, valid-1, status:[pasa:asmbl_6348,status:12], valid-1 NODE_3641_length_3053_cov_36.6444 . gene 256 2966 . + . ID=g1508;Name=g1508.t1 NODE_3641_length_3053_cov_36.6444 . mRNA 256 2966 . + . ID=g1508.t1;Parent=g1508;Name=g1508.t1 NODE_3641_length_3053_cov_36.6444 . five_prime_UTR 256 256 . + . ID=g1508.t1.utr5p1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 256 382 . + . ID=g1508.t1.exon1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 257 382 . + 0 ID=cds.g1508.t1;Parent=g1508.t1;5_prime_partial=true NODE_3641_length_3053_cov_36.6444 . exon 617 778 . + . ID=g1508.t1.exon2;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 617 778 . + 0 ID=cds.g1508.t1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 957 1052 . + . ID=g1508.t1.exon3;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 957 1052 . + 0 ID=cds.g1508.t1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 1475 1639 . + . ID=g1508.t1.exon4;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 1475 1639 . + 0 ID=cds.g1508.t1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 1967 2113 . + . ID=g1508.t1.exon5;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 1967 2113 . + 0 ID=cds.g1508.t1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 2331 2540 . + . ID=g1508.t1.exon6;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 2331 2540 . + 0 ID=cds.g1508.t1;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . exon 2790 2966 . + . ID=g1508.t1.exon7;Parent=g1508.t1 NODE_3641_length_3053_cov_36.6444 . CDS 2790 2966 . + 0 ID=cds.g1508.t1;Parent=g1508.t1;3_prime_partial=true #PROT g1508.t1 g1508 IHSEEGQVKDYLLYFVPRRTMICETVLKEEKVYGEIKIGELQLDILPYDYDLLSMDLETSYRECALDGDRTSLFYVARALMKLQAMYGTIPQIFGKGSCAKTVAEMLVRMRRETPITDGIVAPEIDSLLLIDREVDLITPLCSQLTYEGLIDEVFGVEHGYVSLPAEMIETKEPPKDANKKMKFALNSGDKVYSEIRDLNFSVVGPLLAQKTKSISQQYDERHGVKTVGQMKDYVQKLPAIQIEHRSLGIHTNVAEVIMRRTREPDFHRLLESEQAIICGHENSRVQEYIEDCIGRQEPLLKVLRLVCLMSLAANGLKPKTLDALRDEILQAYGFEYLPTLNNLERLGMFRRQDGRSTFSQ # PASA_UPDATE: g5063.t1, single gene model update, valid-1, status:[pasa:asmbl_2999,status:3], valid-1 NODE_1913_length_8584_cov_36.704 . gene 4104 6315 . + . ID=g5063;Name=g5063.t1 NODE_1913_length_8584_cov_36.704 . mRNA 4104 6315 . + . ID=g5063.t1;Parent=g5063;Name=g5063.t1 NODE_1913_length_8584_cov_36.704 . five_prime_UTR 4104 4155 . + . ID=g5063.t1.utr5p1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 4104 4238 . + . ID=g5063.t1.exon1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 4156 4238 . + 0 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 4520 4727 . + . ID=g5063.t1.exon2;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 4520 4727 . + 1 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 4877 4938 . + . ID=g5063.t1.exon3;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 4877 4938 . + 0 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 5174 5219 . + . ID=g5063.t1.exon4;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 5174 5219 . + 1 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 5593 5810 . + . ID=g5063.t1.exon5;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 5593 5810 . + 0 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . exon 6044 6315 . + . ID=g5063.t1.exon6;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . CDS 6044 6266 . + 1 ID=cds.g5063.t1;Parent=g5063.t1 NODE_1913_length_8584_cov_36.704 . three_prime_UTR 6267 6315 . + . ID=g5063.t1.utr3p1;Parent=g5063.t1 #PROT g5063.t1 g5063 MGLGSYAALAVVISAIAFGYVTYSDKEGVAAMDYSANDTDANREAIRAKKLSAFVLGATGEVGKALVRDLLESDVYEHVTTLGRNAVQYDGPNVQKLKQVKIDFENLEQEREKFRGFDAGFCCLGTTRGKVGAEMFVRVDHDYVVNAAKIAKEEGTRHFGLVSSSGADPKSWFLYLNTKGRTEEDVKALSFPSLAIYQPGFLECNRAERRPMERAALAFIPSFGRVFAPNKMSVRVETVARAMRLFATTAGTGDAKPVSVLSNKDIVTIAGGDAPRTTE* # ORIGINAL: g5061.t1 original gene structure, not modified by PASA NODE_1913_length_8584_cov_36.704 AUGUSTUS gene 225 775 . + . ID=g5061;Name=g5061.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS mRNA 225 775 . + . ID=g5061.t1;Parent=g5061;Name=g5061.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS exon 225 452 . + . ID=g5061.t1.exon1;Parent=g5061.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS CDS 225 452 . + 0 ID=cds.g5061.t1;Parent=g5061.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS exon 707 775 . + . ID=g5061.t1.exon2;Parent=g5061.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS CDS 707 775 . + 0 ID=cds.g5061.t1;Parent=g5061.t1 #PROT g5061.t1 g5061 RYNVKISFPDGSGKTLVKTYEEFYSFHCAMLDAFPLEAGEADPNHPRQIPYLPGKKLFFTAAAAAKRMKELDAYLTDVANVPSHIQSWGPFRQFFNLP* # ORIGINAL: g5064.t1 original gene structure, not modified by PASA NODE_1913_length_8584_cov_36.704 AUGUSTUS gene 6577 7227 . + . ID=g5064;Name=g5064.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS mRNA 6577 7227 . + . ID=g5064.t1;Parent=g5064;Name=g5064.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS exon 6577 7227 . + . ID=g5064.t1.exon1;Parent=g5064.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS CDS 6577 7227 . + 0 ID=cds.g5064.t1;Parent=g5064.t1 #PROT g5064.t1 g5064 MAQIVEGDLLSHDAQYIAHQCNCVSTGARGLALDLFKMHPHADVGKMLAREKRKNNASVASGKTNPLESFFKPTGGESPDYAAGTTTTAATVPVTARTATATTTKQASIVRVGGGISVHGDGIKERLIINMYAQYGPGAPKTYGTDTAGTRARWFGACLRKIEAIEDLSSIAFPYMIGCGLAKGDWDKYRAMIDAFAVRAKARGISVYIVRRSESG* # ORIGINAL: g5062.t1 original gene structure, not modified by PASA NODE_1913_length_8584_cov_36.704 AUGUSTUS gene 1979 3682 . - . ID=g5062;Name=g5062.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS mRNA 1979 3682 . - . ID=g5062.t1;Parent=g5062;Name=g5062.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS exon 1979 3682 . - . ID=g5062.t1.exon1;Parent=g5062.t1 NODE_1913_length_8584_cov_36.704 AUGUSTUS CDS 1979 3682 . - 0 ID=cds.g5062.t1;Parent=g5062.t1 #PROT g5062.t1 g5062 MAGHLPRLVPWSNRAEWEAVHSWLYSVNADDRKRGCARVAAWRSRGKIPVAIDCTASLVSVRLADAIAVADDAGAVGEVAAAWDVPMRDYDGTALRMSYSMSLVRFVNGMVDAAQSGVYAKSVSGICDQMGVADWIVDARHEATHTAVPSLASLRIASAAALAWLGERYWSQQRAHLAVSSVKMCESLAAHRADLKALAKSVGKGSSEADTEAYASAARSLAVKLSRGISANSVRNALVPALMEDGVLFPARDARLDGLDADLVLDQRVLARWQPTLAAFSDAWPHFASSLFAAIIDELDGGLGGCVDGEGIPAKTMPPVERDGSRGNAAATDGVSRESTAAADPVRLACMSILALRMVLAVKNGSPLFGGDLSAGTAATRRSHGASGAELSLWFALEACERLLTPYLLPMYPHVLALCSPSVNADVRRARVNVAVALFLPQLPSEISAVAMRELQSEGISTGTCAPLETASATTLTQPKGPITSVDEFEIAARDVAAARRLGGGVGCMAGDVGEADTGDAAVTWTRVTDADLPCWRALGMGALPGHRMPALDMPPSLDAHTNSWVL* # PASA_UPDATE: g5065.t1, single gene model update, valid-1, status:[pasa:asmbl_2997,status:12], valid-1 NODE_1913_length_8584_cov_36.704 . gene 7290 8345 . - . ID=g5065;Name=g5065.t1 NODE_1913_length_8584_cov_36.704 . mRNA 7290 8345 . - . ID=g5065.t1;Parent=g5065;Name=g5065.t1 NODE_1913_length_8584_cov_36.704 . five_prime_UTR 8344 8345 . - . ID=g5065.t1.utr5p1;Parent=g5065.t1 NODE_1913_length_8584_cov_36.704 . exon 7837 8345 . - . ID=g5065.t1.exon1;Parent=g5065.t1 NODE_1913_length_8584_cov_36.704 . CDS 7837 8343 . - 0 ID=cds.g5065.t1;Parent=g5065.t1;5_prime_partial=true NODE_1913_length_8584_cov_36.704 . exon 7290 7670 . - . ID=g5065.t1.exon2;Parent=g5065.t1 NODE_1913_length_8584_cov_36.704 . CDS 7566 7670 . - 0 ID=cds.g5065.t1;Parent=g5065.t1 NODE_1913_length_8584_cov_36.704 . three_prime_UTR 7290 7565 . - . ID=g5065.t1.utr3p1;Parent=g5065.t1 #PROT g5065.t1 g5065 DEDSSLDPALERQVETIRNLVDSYMSIVNKTVQDMVPKAVMHLLVARVKDYCKSEIIAGLYRSGGDAAKLMEESPEAADRRKNVLRMYNMASEALKIMSEINLNTKYTPVPPPIVTDDDFAPVKPSPSGAGRPQSMAAPPRPGAAANPAMPSRPAPPGGTAPPSRPSMPDRPAAPAAAAAAAAAARPPPPVSRPAMPPRPGQK* # ORIGINAL: g876.t1 original gene structure, not modified by PASA NODE_1844_length_8947_cov_45.9294 AUGUSTUS gene 4427 6840 . - . ID=g876;Name=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS mRNA 4427 6840 . - . ID=g876.t1;Parent=g876;Name=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 6739 6840 . - . ID=g876.t1.exon1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 6739 6840 . - 0 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 6414 6594 . - . ID=g876.t1.exon2;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 6414 6594 . - 0 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 6004 6094 . - . ID=g876.t1.exon3;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 6004 6094 . - 2 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 5727 5766 . - . ID=g876.t1.exon4;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 5727 5766 . - 1 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 5217 5514 . - . ID=g876.t1.exon5;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 5217 5514 . - 0 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 4941 5045 . - . ID=g876.t1.exon6;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 4941 5045 . - 2 ID=cds.g876.t1;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 4427 4599 . - . ID=g876.t1.exon7;Parent=g876.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 4427 4599 . - 2 ID=cds.g876.t1;Parent=g876.t1 #PROT g876.t1 g876 MGPHVETAVEQRTDFHWVSTDEPHATRRKQILEKHPEIRSLYGPDKDTLKFVLILFAVQLVLGALLIGRPLWVVILAAYTIGATLNHSLNMAVHELSHRLCFKTARYNTYLAVLANLPTALPTAVTFRKYHLEHHMKQGVDGIDTDIPTPAEGRFFTTTARKIVWVFCLPLFYTLRPLLTKPKPMTMEEFWNWAVVLAWDVSVAYFAGYEVLLYYFLGTWFGNGLHPLAFHLIGEHFEFTPGYETYSYYGGFNKILLNVGYHNEHHDFPHIPGSRLHRVRAIAPEFYNNLPSYTSWWQPMVRFMFDPAVTPFFRVMRKDKTLAPENKLD* # ORIGINAL: g875.t1 original gene structure, not modified by PASA NODE_1844_length_8947_cov_45.9294 AUGUSTUS gene 657 3949 . + . ID=g875;Name=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS mRNA 657 3949 . + . ID=g875.t1;Parent=g875;Name=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 657 805 . + . ID=g875.t1.exon1;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 657 805 . + 0 ID=cds.g875.t1;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 995 2078 . + . ID=g875.t1.exon2;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 995 2078 . + 1 ID=cds.g875.t1;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 2331 3161 . + . ID=g875.t1.exon3;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 2331 3161 . + 0 ID=cds.g875.t1;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 3395 3604 . + . ID=g875.t1.exon4;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 3395 3604 . + 0 ID=cds.g875.t1;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS exon 3806 3949 . + . ID=g875.t1.exon5;Parent=g875.t1 NODE_1844_length_8947_cov_45.9294 AUGUSTUS CDS 3806 3949 . + 0 ID=cds.g875.t1;Parent=g875.t1 #PROT g875.t1 g875 MGITASLSLLLALLLFVCTMRCTVATAARTTTINGQDMLKQRVKSMFYHGYDSYMRYAFPLDELKPLTCGGMDTWGSYCLTLIDSLDALVIFGNASEFEKAIYIVRDRVTFDADINVSVFETNIRILGGLISAHCLIADEDGPAMLDPLRSRYDGFLLRMARDVGDRLLAAFETPTGMPYGTVNLRNGIPDNETPITCAACVGTFSVEFGALSRLSGDDKYHRAAKGAAKALYGRRTKLGLYGNHINVLTGEWTHLDASIGPSVDSLYEYFAKGAYLFRDPEYHTMFGDSYAGAMQSLRTGPWYVSVNMHSGQVSLPWFTALSAFWPGLQVLHGDVGTAIESVRAYYGVWKEYGFVPEVLNLQNNFVPQGQGHYPLRPELIESTMYAYRATKDPLWLEAGRDYVASLRQTKTACGHAVVSDVRNHRLSDRMESFFLSETIKYLYLLLDEDNFVHTGNYVFNTEGHIIPADYLYRLENDEESTLWRHQEDTMDAFLEDARMRALKRAGAKEEEQRAAEKKRRIAELRRLYEEDFDRRRNSGKGVQGNGEPALEPAWKSDPLYVEMLTSLLKSLRTKEQLENFGAGAVSRETDGDAEDPDDVAAQPDSADSAKEKKAMDAKSESESESESERVRQHRPTDWKGCRRLRFEDTFSVFTGDIAEAVDGLQWRSTHSPTNARAIERPDVCASKYMQKETDGKWLGFFMTRDLVRDAFLSDVYDVLDGHSVVERNGPLGPTVVQHFAQGTWCPEIMASRSSTVKYICSEGGSARIVSIAEPSMCVYEFVVETPVVCSQTRRPRDERTLMEG* # ORIGINAL: g5484.t1 original gene structure, not modified by PASA NODE_363_length_25923_cov_42.6605 AUGUSTUS gene 42 2336 . + . ID=g5484;Name=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS mRNA 42 2336 . + . ID=g5484.t1;Parent=g5484;Name=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 42 546 . + . ID=g5484.t1.exon1;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 42 546 . + 0 ID=cds.g5484.t1;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 756 848 . + . ID=g5484.t1.exon2;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 756 848 . + 2 ID=cds.g5484.t1;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 1124 1305 . + . ID=g5484.t1.exon3;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 1124 1305 . + 2 ID=cds.g5484.t1;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 1827 1869 . + . ID=g5484.t1.exon4;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 1827 1869 . + 0 ID=cds.g5484.t1;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 2101 2336 . + . ID=g5484.t1.exon5;Parent=g5484.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 2101 2336 . + 2 ID=cds.g5484.t1;Parent=g5484.t1 #PROT g5484.t1 g5484 IIPEAGDRLINGFTQPQNEFDISSIADDVRKFHNSLLIADLHADTMMWTHRDVTKRLDYGHVDIPRLIEGNVALQGFSAVTKVPFLMKFDNNDNNTDMFPFVSVPQQWPYPTLMSLKERAKFQAEQLYTLNRRSLGMFYTIKFREDLSEYLTMRERDSAITAGFLAIEGAHAFDGSLDSIDVLFDTGYRMVGPTHFFDNELGGSAHGLGHHGLTPFGVAAIKKMESLGIFIDIAHASPAMIDDIFAIATRPVVSSHSGVKAIVYTVGVIGAKHVALGSDYDGAVKVPFDTSQLVRITDGLLKAGISREDVERVMGRNVIELFLKHLPSRKVSASARERATVEGFDDIPENDR* # ORIGINAL: g5488.t1 original gene structure, not modified by PASA NODE_363_length_25923_cov_42.6605 AUGUSTUS gene 8414 15032 . - . ID=g5488;Name=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS mRNA 8414 15032 . - . ID=g5488.t1;Parent=g5488;Name=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 14430 15032 . - . ID=g5488.t1.exon1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 14430 15032 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 13881 14087 . - . ID=g5488.t1.exon2;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 13881 14087 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 11600 13657 . - . ID=g5488.t1.exon3;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 11600 13657 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 9768 11276 . - . ID=g5488.t1.exon4;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 9768 11276 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 9433 9627 . - . ID=g5488.t1.exon5;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 9433 9627 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 8898 9071 . - . ID=g5488.t1.exon6;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 8898 9071 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 8414 8590 . - . ID=g5488.t1.exon7;Parent=g5488.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 8414 8590 . - 0 ID=cds.g5488.t1;Parent=g5488.t1 #PROT g5488.t1 g5488 MDRSAHSAGVTWLESSLTETLLPGSPWDALDSRLAAAVRSIVAQRMDRAEVRQVLFALLGDDFVREHFPTAENNALLLEEPYMPSDMRRHLFTELSRWLSRAIDAELERLDLLKSNEARLVRSHVEEAVRRGLRREVSLHTPVGEEADCLSRAVCALLRQQPKQYPRVAKRLSGRPLPSSLRQYVWLQCVDDRSYALRFSQKVVENVRALGLESAQMSPINGLIRRVTDEVHARSPTMRTTTTPAMRETSVALLNILYVQSGRYEARYPQLVYPILRTFPAATPENIAPLFSRFLEHHALDTRAAASVAEHVMLRVSKADPELYARMDKAAAEASVGGQDFLVRLAELVGENVDAKGRAVQQSHNTAAAAHTGRSLLSQPSVFVRKWILEGFVGTLSAQGVMYVWDQCFLCGWAQEIPTICLCVLFLLRRRIIAAADGGFEGLRYALVQSPFELNADDVRRAYVHLRDGGDFMSVALMDSTSETLGPQFKAAVKRHAHDMSDSDSDDNLGRAALVLPPLRRVDAGDAAVVDDMPKLESIALAEKAAEAKRLRKAEKRAKEEALKGLSETAAAHVTQLEQRQLQEAQRKHRMEMNDGGDDGNSDVDNNDTTHDANAPAGDVAAIVVVPPDADDGEEHREIEGSAAGSSRASRTSFREAGLAVAAVGVLRESRSPAAPAASPKPLPRSSGIPVSSRTETMQVPPAIVLLIGRAILRSVGHIRAVDVHADASLYEGDSLAAGWSTTPMRRNVEDGGGGGEDAAAGESLSVVPLNSETHPHIVRELTDSSGMGDCEIEWNVHADVAHFGDAVAQRKLGPRCRIIVQLYATRGAQTHEDENHNDGGQGHRGLARGRGHRAVVAWTFYDVFSPTLGTSSVLWKLREGIRQRELYLPPVNPGCAHDGTGLLPWGRSVMEIVSFGSDAPPSGRLPEWTLEIMGRTGASLGGPSARTIIQRPMSQNTVRSSITSIASAPALHNPPASPDAARAAPPLDPVPYAQGDGVDFYVDYASHLPASVVVSRVVVEFRNSKGETVPAHNGGRRSVMAVTCNLDSEPLFPVYNARCELRHTVANFDPATVACITVTYIDSLSRRDVLLGSCVIPLFGFREVKGGGGGAGAGASGEGASGHVADGGAKHSQAASKGASVKAQRPANGNDGSIDDDDDGDDDDSEGDDDDSEGEDDDSADSGEGDQVPVEKVPAAVSGRIRMALVGGRSVPLRHTALPPGKLNPSSLNGAVEVPCARLFVRTHLPPRTPDGRSPMSSTTAPPSDWRALGVVVASPPMLSEFYRWEPDSAGRKRGTGPGNSTIPHSFAPVRMALSARQGGSASDAIALRLGQEDAGMVGAKDAELLRLIGVLFERDVEEHAKPRGWLSVKKPEAPQLSPSLLCTKALMDLSRIVPYDASVGVAIRCVGVSGLPRPFHTNVRVCVRDFGSAEELHGDAWTARREFASPVDAPRYKDSATIFRPRADTKVVVVFEVHSISPPKSDNTRSLVPQGWAALPLFSADGAEFVRSGVHILPMYSIGTLRTFLGSCKTHTPGDLLTCDPKIRKRLKPIEWATVGVHVVDGQFYDAESTDGTYGYPSVELNKTWLDPSHISNYEKKAKAAGSPLNTVIPREIAESAEERDTFETGLNSALRELVGGD* # ORIGINAL: g5485.t1 original gene structure, not modified by PASA NODE_363_length_25923_cov_42.6605 AUGUSTUS gene 2708 3769 . - . ID=g5485;Name=g5485.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS mRNA 2708 3769 . - . ID=g5485.t1;Parent=g5485;Name=g5485.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 2708 3769 . - . ID=g5485.t1.exon1;Parent=g5485.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 2708 3769 . - 0 ID=cds.g5485.t1;Parent=g5485.t1 #PROT g5485.t1 g5485 MLRRSSRLAAAVHNEASSPATNAPAATLTIQTATTQSVRKRKRGVGADAVSTVGSTVSSLSTSDSTHATAHKRHKHSAVEPTADFSSSDLVSAVPATGRKGAVRRVDVGPSLLAALNTGSVECASLAEMLTVDFSVLICTVLPTDGPALSDADVTSLKSLGVKARMSYAARMLCDRHVHHASLATHRSDIVRGWAAYVASMDQRAATVALCLDAVKRYADDANAGVREFAMMAARDTIAADPLGAIAHLTSWATDASANVRRFASEATRPCGVWIAHIPLLKASPELGLPILEPLRADPSLYVQKSVANWLNDASKSNGQWVRSVCARWRREEEGSKATEFICKRALRTLAKK* # PASA_UPDATE: g5486.t1, single gene model update, valid-1, status:[pasa:asmbl_6345,status:12], valid-1 NODE_363_length_25923_cov_42.6605 . gene 4353 5510 . - . ID=g5486;Name=g5486.t1 NODE_363_length_25923_cov_42.6605 . mRNA 4353 5510 . - . ID=g5486.t1;Parent=g5486;Name=g5486.t1 NODE_363_length_25923_cov_42.6605 . five_prime_UTR 5446 5510 . - . ID=g5486.t1.utr5p1;Parent=g5486.t1 NODE_363_length_25923_cov_42.6605 . exon 4353 5510 . - . ID=g5486.t1.exon1;Parent=g5486.t1 NODE_363_length_25923_cov_42.6605 . CDS 4663 5445 . - 0 ID=cds.g5486.t1;Parent=g5486.t1 NODE_363_length_25923_cov_42.6605 . three_prime_UTR 4353 4662 . - . ID=g5486.t1.utr3p1;Parent=g5486.t1 #PROT g5486.t1 g5486 MLQNLPLDVLAIIVEMVAQFGTVKAVLALGASSRPLRQFVWKSRMVWVRLAEMVGARPPTVAQWSAWNHADKWEWFKTRVGVFVCAECTARKVMRHGRLWQLTCVECAHLNLEVNCASAQQEYRIPTDLFNWFIPSEINGPRLYAVRDLLFVAVDIYGSLEAHETAQNDAILRKQLLAKWRKRIDLEASEYRARHQQKKMEPLDALETRVFTALEALPRIRRMQHVCPFDMRKVGVPLLLCEKAACVVNEVKRNREYVRS* # PASA_UPDATE: g5490.t1, single gene model update, valid-1, status:[pasa:asmbl_6343,status:3], valid-1 NODE_363_length_25923_cov_42.6605 . gene 22270 24577 . + . ID=g5490;Name=g5490.t1 NODE_363_length_25923_cov_42.6605 . mRNA 22270 24577 . + . ID=g5490.t1;Parent=g5490;Name=g5490.t1 NODE_363_length_25923_cov_42.6605 . five_prime_UTR 22270 22527 . + . ID=g5490.t1.utr5p1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 22270 22640 . + . ID=g5490.t1.exon1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 22528 22640 . + 0 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 22940 22980 . + . ID=g5490.t1.exon2;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 22940 22980 . + 1 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 23311 23413 . + . ID=g5490.t1.exon3;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 23311 23413 . + 2 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 23510 23600 . + . ID=g5490.t1.exon4;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 23510 23600 . + 1 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 23969 24058 . + . ID=g5490.t1.exon5;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 23969 24058 . + 0 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . exon 24188 24577 . + . ID=g5490.t1.exon6;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . CDS 24188 24421 . + 0 ID=cds.g5490.t1;Parent=g5490.t1 NODE_363_length_25923_cov_42.6605 . three_prime_UTR 24422 24577 . + . ID=g5490.t1.utr3p1;Parent=g5490.t1 #PROT g5490.t1 g5490 MAAPKESHQRLKRDYMKLMKNPIPYIQAAPLPSNMLEWHYVMTGPEKTPYHGGYYHGKLIFPSEYPFKAPKFYIITPNGRFETNRSICLSTSSLHPESWNPSNSVSSLLTGFLSFMLEDTDTLGSVKTTDAQKRELARKSLEFNLKNATFCDLFPELVDKIKGELEAQPSPLTTDGTTAGGARAAPVSDPDRSWIDSPVANLVCVVLLFFLAWAAKKIIEQQA* # PASA_UPDATE: g5489.t1, single gene model update, valid-1, status:[pasa:asmbl_6344,status:12], valid-1 NODE_363_length_25923_cov_42.6605 . gene 15775 21650 . - . ID=g5489;Name=g5489.t1 NODE_363_length_25923_cov_42.6605 . mRNA 15775 21650 . - . ID=g5489.t1;Parent=g5489;Name=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 21632 21650 . - . ID=g5489.t1.exon1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 21632 21650 . - 0 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 21289 21457 . - . ID=g5489.t1.exon2;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 21289 21457 . - 2 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 21031 21127 . - . ID=g5489.t1.exon3;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 21031 21127 . - 1 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 20542 20658 . - . ID=g5489.t1.exon4;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 20542 20658 . - 0 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 20116 20342 . - . ID=g5489.t1.exon5;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 20116 20342 . - 0 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 19655 19833 . - . ID=g5489.t1.exon6;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 19655 19833 . - 1 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 19203 19313 . - . ID=g5489.t1.exon7;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 19203 19313 . - 2 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 18696 18852 . - . ID=g5489.t1.exon8;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 18696 18852 . - 2 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 18005 18385 . - . ID=g5489.t1.exon9;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 18005 18385 . - 1 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 17378 17612 . - . ID=g5489.t1.exon10;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 17378 17612 . - 1 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 16764 16930 . - . ID=g5489.t1.exon11;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 16764 16930 . - 0 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 16286 16460 . - . ID=g5489.t1.exon12;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 16286 16460 . - 1 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . exon 15775 16055 . - . ID=g5489.t1.exon13;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . CDS 15795 16055 . - 0 ID=cds.g5489.t1;Parent=g5489.t1 NODE_363_length_25923_cov_42.6605 . three_prime_UTR 15775 15794 . - . ID=g5489.t1.utr3p1;Parent=g5489.t1 #PROT g5489.t1 g5489 MATGYARFVLVVLLSCIGAASASTLSTLGRDGGIDTASGLLDRLIPKHASNFDLEIIAADGDNMVFEVEAGANGRVTLRGSSGVAIGSALNWYLKYMCNAHVSWAGDQLELPAILPVPKEKYRSVSTVKWNYYMNVCTVSYSAVWWDWARWEREIDWMALNGINLPLAFTGQEYVWRELFREYNLTSSDMAEFFSGPAFLAWQRMGNLRGWGGALSDSFIDGQMKLQQQILARMRAYGMTPVLPAFAGHVPLAFTKLFPSAAITRSERWNGFPDNYCCVYFVDPSDKLFLELGSRFIELQTQVYGTDHYYNCDQFNEMTPSSSEPEYLTAASKSVYTSMTMADPQAVWIMQGWLFFNDASFWKTPLVKALLDGVPDSGMIILDLFSEVKPIWSQTQSYFGKPFIWCMLHNFGGNLGMYGVAPVLNTQPYAALAAANSTMVGVGLTMEGIDQNYWVYEFMLETMWREEPTDLNEWMAAFVRRRYGYDNGELSLPWTSILSTVFNCTTGQFGVTKSVIVLRPDFNLLRGGFMATKLHYDADVLERAWIKFARASDAARAEHHLSPQGYVTLSHDLVDVTRQVLSNLFLSTYLRFSAASTSMNSTAVAQTGALMLEIIKDTDRILGSSEFYLLGRWIETARTFGADDSEADLLEFNARNQVTMWGPNAEISDYASKDWAGLMAGYYLRRWDIFVSAARLAASSGVAFDKFRPKYTADVVAFEQQWQKDYGNGYASSPVGDAIEIALELVGKYAPLLCGGDVEECFRV* # ORIGINAL: g5487.t1 original gene structure, not modified by PASA NODE_363_length_25923_cov_42.6605 AUGUSTUS gene 6784 7458 . - . ID=g5487;Name=g5487.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS mRNA 6784 7458 . - . ID=g5487.t1;Parent=g5487;Name=g5487.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 7115 7458 . - . ID=g5487.t1.exon1;Parent=g5487.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 7115 7458 . - 0 ID=cds.g5487.t1;Parent=g5487.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 6784 6919 . - . ID=g5487.t1.exon2;Parent=g5487.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 6784 6919 . - 1 ID=cds.g5487.t1;Parent=g5487.t1 #PROT g5487.t1 g5487 MSHSASPAFPERALKTTWEELSGASFVQSASTADANGGVTRWYKTGRHLFSAAWVQGKITSWKGGGGNHSRIVIAIDDETGVGACDCQWIGAQDPSLLAELEGKWRSMYVMAVGRVLSAGPAEDSPSILAFKLVNLTDSPDAPDLWAMELAERDMGLDK* # ORIGINAL: g5491.t1 original gene structure, not modified by PASA NODE_363_length_25923_cov_42.6605 AUGUSTUS gene 24954 25265 . - . ID=g5491;Name=g5491.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS mRNA 24954 25265 . - . ID=g5491.t1;Parent=g5491;Name=g5491.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS exon 24954 25265 . - . ID=g5491.t1.exon1;Parent=g5491.t1 NODE_363_length_25923_cov_42.6605 AUGUSTUS CDS 24954 25265 . - 0 ID=cds.g5491.t1;Parent=g5491.t1 #PROT g5491.t1 g5491 MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKTFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG* # ORIGINAL: g2789.t1 original gene structure, not modified by PASA NODE_11174_length_291_cov_30.5046_potentialcontaminant AUGUSTUS gene 144 291 . - . ID=g2789;Name=g2789.t1 NODE_11174_length_291_cov_30.5046_potentialcontaminant AUGUSTUS mRNA 144 291 . - . ID=g2789.t1;Parent=g2789;Name=g2789.t1 NODE_11174_length_291_cov_30.5046_potentialcontaminant AUGUSTUS exon 144 291 . - . ID=g2789.t1.exon1;Parent=g2789.t1 NODE_11174_length_291_cov_30.5046_potentialcontaminant AUGUSTUS CDS 144 291 . - 0 ID=cds.g2789.t1;Parent=g2789.t1 #PROT g2789.t1 g2789 IDNELHQSRARKHAKLENDQVYYRDEKSKLRDKESKLREEKNILLKRAS # ORIGINAL: g4896.t1 original gene structure, not modified by PASA NODE_1273_length_12511_cov_41.3323 AUGUSTUS gene 3317 4933 . + . ID=g4896;Name=g4896.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS mRNA 3317 4933 . + . ID=g4896.t1;Parent=g4896;Name=g4896.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS exon 3317 4933 . + . ID=g4896.t1.exon1;Parent=g4896.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS CDS 3317 4933 . + 0 ID=cds.g4896.t1;Parent=g4896.t1 #PROT g4896.t1 g4896 MQRDRERCKTAELRSRYVWAPLDESRTVLPVDIVRNKWIHSIGDSLSNNLMTSFAEIVSKKHGGAKAVRYCIHMAASANRTIDDDGAPIMKLNDPYSPWPYLVVDIGCRNGYNVRVAINGDLSPPDRYQYVWSIFVIEQINVTISNQWHSSKRIADFNPAPPFTSFAPWTQPRFLDMVDAFLATAATHSAKSSLSSQSSPSPQSVHSPQSAQSPQSAQSPQSAQSSSSLQSATHPAKSSLSSQSSPSQQSVHSPQSAQSPQSAQSSSSLQSPPSSTTRNSATPTNGIISAESSAPSTVASTPTHDTRGSETRDTPDTRDIHNTRDTRDTDTHDTRDTHDTDTRDTRDTRDTRDTDTHDTRDTRDTRDIYNTDAIFDELPGVCPLDATRLQKLLPHAKLPDAVLMNSGLHHAAFLNAVEYATYIAAFIERVRLDYPPDRSRLFGRSTAQTQWWSPVLPESHNCRTQFRMELMNEIAENEIGRFNEREMARDRPHVVVVDYVQMSLGREDATVDNRHYGMKVEGSVVDEWLNIMTGCRQD* # ORIGINAL: g4895.t1 original gene structure, not modified by PASA NODE_1273_length_12511_cov_41.3323 AUGUSTUS gene 2371 3300 . + . ID=g4895;Name=g4895.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS mRNA 2371 3300 . + . ID=g4895.t1;Parent=g4895;Name=g4895.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS exon 2371 3300 . + . ID=g4895.t1.exon1;Parent=g4895.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS CDS 2371 3300 . + 0 ID=cds.g4895.t1;Parent=g4895.t1 #PROT g4895.t1 g4895 MTLLGRARLSFTVTPLRSMSLTSNSVVKEDRESISIATQQTVDAQVMHWLPNSTQGHRWRATWLFCMNPPPCVVEMKPINARNSEFVTTGGDAENAHEVNRMVVHVGASFTLDIQARDEDGNKRRCGGDSISVDIRGPSAYARPAEDHLNGLYSLTTTLYDLGEYVVRARVDYRACEGLNRCNVSMASMVFEYIGEGRVDAFTLTVITAPSQQSPAMVSPRGPLPMQPQCGVTLCASATAKCPSHPHMVGRWRDPRDMCRLLDAQSASARSAGLPTRRRAAFVPIFVHNTLPRNRLRNSSNGIFLDTYK* # PASA_UPDATE: g4894.t1, single gene model update, valid-1, status:[pasa:asmbl_1041,status:12], valid-1 NODE_1273_length_12511_cov_41.3323 . gene 93 1543 . + . ID=g4894;Name=g4894.t1 NODE_1273_length_12511_cov_41.3323 . mRNA 93 1543 . + . ID=g4894.t1;Parent=g4894;Name=g4894.t1 NODE_1273_length_12511_cov_41.3323 . exon 93 478 . + . ID=g4894.t1.exon1;Parent=g4894.t1 NODE_1273_length_12511_cov_41.3323 . CDS 93 478 . + 0 ID=cds.g4894.t1;Parent=g4894.t1;5_prime_partial=true NODE_1273_length_12511_cov_41.3323 . exon 756 1543 . + . ID=g4894.t1.exon2;Parent=g4894.t1 NODE_1273_length_12511_cov_41.3323 . CDS 756 1239 . + 1 ID=cds.g4894.t1;Parent=g4894.t1 NODE_1273_length_12511_cov_41.3323 . three_prime_UTR 1240 1543 . + . ID=g4894.t1.utr3p1;Parent=g4894.t1 #PROT g4894.t1 g4894 GVFFVDTSGGALVIKGSKQIATELFASMVCLRFAIHTPCSLVVATDSHFGAAMLARLKTLDKTGRLVLSLHDQLHVMLMEYVCGTTLGSVKYERACQVFGSETSLSVNGKKRLREIGRLMGVDCLLNNSDRLPLVWDNRGNPGNLMLAGSIGCIVAIDNQFIPVDVGTHPERVAAQRVRVEELCRCVRDNPGVPLTQFQRICDKLLEYTGFTVGTEGVLEMQEGFAQFVALISATDRVGFEGELKSWRDAIRRIEPKVISHDMLDVDYVMAMFDAMRPLAIVQEPTSLF* # PASA_UPDATE: g4897.t1, single gene model update, valid-1, status:[pasa:asmbl_1042,status:3], valid-1 NODE_1273_length_12511_cov_41.3323 . gene 5050 11250 . - . ID=g4897;Name=g4897.t1 NODE_1273_length_12511_cov_41.3323 . mRNA 5050 11250 . - . ID=g4897.t1;Parent=g4897;Name=g4897.t1 NODE_1273_length_12511_cov_41.3323 . five_prime_UTR 11008 11250 . - . ID=g4897.t1.utr5p1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 10966 11250 . - . ID=g4897.t1.exon1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 10966 11007 . - 0 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 10511 10665 . - . ID=g4897.t1.exon2;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 10511 10665 . - 0 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 9965 10248 . - . ID=g4897.t1.exon3;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 9965 10248 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 9502 9673 . - . ID=g4897.t1.exon4;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 9502 9673 . - 2 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 9012 9232 . - . ID=g4897.t1.exon5;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 9012 9232 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 8592 8691 . - . ID=g4897.t1.exon6;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 8592 8691 . - 2 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 8210 8302 . - . ID=g4897.t1.exon7;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 8210 8302 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 7799 7873 . - . ID=g4897.t1.exon8;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 7799 7873 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 7312 7438 . - . ID=g4897.t1.exon9;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 7312 7438 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 6814 7059 . - . ID=g4897.t1.exon10;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 6814 7059 . - 0 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 6385 6458 . - . ID=g4897.t1.exon11;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 6385 6458 . - 0 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 6124 6259 . - . ID=g4897.t1.exon12;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 6124 6259 . - 1 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . exon 5050 5747 . - . ID=g4897.t1.exon13;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . CDS 5538 5747 . - 0 ID=cds.g4897.t1;Parent=g4897.t1 NODE_1273_length_12511_cov_41.3323 . three_prime_UTR 5050 5537 . - . ID=g4897.t1.utr3p1;Parent=g4897.t1 #PROT g4897.t1 g4897 MDSERRPILGADKHLRSQSTSNAPATCGIETDRSCRDVFFLLLYVAFWIGMLVIAGFAFTKGNPARLLYGVDSRGNLCGYDNSNIDGSLPNLRGYKNLLSFVDEIGATRSLCVVSCPTLTATASMSQFNCYYSYNVNDTTTLYNGIANGICAPGVFESRARFHRCIPSKLDDSFTDPVNGAVHTAASLTQNVYGRLDATELGQRVLSDMSIAYPWIFLLAGIAVVVSFLWTLLVRHMAGCMVWASIATAVALSIASTGFIFIKYHDESKEIHSGKDGTSADKSNRDTLLAMGIVMAVFTVILIAFIYMARRRIELAIAVVKETAVAMYFLPQLILVPFASFIAYSALFAYWVGVMLFLGSTGKAQLSVVNDIPMLIYEEDKTLRNMQLYHLFGLLWALGFISAIVRTTVAGAFGTYYWTRDKEFMTPWVISTSFARTVHYHLGSLALGSLLVALVQTVRFFVESLRRQLADSSSTLAKFAFACVQCCFSIIEAIIRFINKNAYVMIALHGKSFCTSAKRGFDLFERNAFRMIAVNWVADLVMFMGKAVITLVASMIAVAIFEPMNNMSYYAVPVLVVGLLAYCISSAFMGLYSVGTDTIFICYCEDAELNDGSSARPYFMSGSLRDIMGFTSDAEQHSDGDGGV* # ORIGINAL: g4898.t1 original gene structure, not modified by PASA NODE_1273_length_12511_cov_41.3323 AUGUSTUS gene 11843 12419 . - . ID=g4898;Name=g4898.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS mRNA 11843 12419 . - . ID=g4898.t1;Parent=g4898;Name=g4898.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS exon 12263 12419 . - . ID=g4898.t1.exon1;Parent=g4898.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS CDS 12263 12419 . - 0 ID=cds.g4898.t1;Parent=g4898.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS exon 11843 12051 . - . ID=g4898.t1.exon2;Parent=g4898.t1 NODE_1273_length_12511_cov_41.3323 AUGUSTUS CDS 11843 12051 . - 2 ID=cds.g4898.t1;Parent=g4898.t1 #PROT g4898.t1 g4898 MNRMVLKRYIQSLFPRTVVDEAENGQAAVALAQERNYDIIWMDVQMPIMDGIEATKRIRALSKCKRTPIVGITGDVTAEEVARYLGIGMHDVRGKPVTRGTIEEAITKWERRPSASHSTSA* # ORIGINAL: g4350.t1 original gene structure, not modified by PASA NODE_3449_length_3436_cov_128.712 AUGUSTUS gene 493 2841 . - . ID=g4350;Name=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS mRNA 493 2841 . - . ID=g4350.t1;Parent=g4350;Name=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS exon 2819 2841 . - . ID=g4350.t1.exon1;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS CDS 2819 2841 . - 0 ID=cds.g4350.t1;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS exon 2104 2242 . - . ID=g4350.t1.exon2;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS CDS 2104 2242 . - 1 ID=cds.g4350.t1;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS exon 1562 1871 . - . ID=g4350.t1.exon3;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS CDS 1562 1871 . - 0 ID=cds.g4350.t1;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS exon 493 1106 . - . ID=g4350.t1.exon4;Parent=g4350.t1 NODE_3449_length_3436_cov_128.712 AUGUSTUS CDS 493 1106 . - 2 ID=cds.g4350.t1;Parent=g4350.t1 #PROT g4350.t1 g4350 MRDAFDVLIPKLVRCIDRLSAFATEHRALATLGFTHFQPAQLTTVGKRACLWIQDLLMDLRNLSRARNDLRFRGVKGTTGTQASFLTLFNGDHAKVDALDDRVTELSGFPSAFIVTGQTYSRKVDADCLAALASMGATLHKIGTDIRLLAHLKEVEEPFEKDQIGSSAMAYKRNPMRSERCCSLARHLMVLVGDAHHTAAVQWMERTLDDSAIRRIAIAEAFLSADALLVLLQNIAEGLVVYPMVIARHIRDELPFMATENIIMAMVKNGGDRQVCHEEIRVLSHQAAAVVKMEGKPNDLIERVSASDYFAPIRNELDVLLDPATFIGRAPEQVARFIETEVKPALAPYVSSLSGKAEISI* # ORIGINAL: g1357.t1 original gene structure, not modified by PASA NODE_1424_length_11436_cov_39.2259 AUGUSTUS gene 175 2319 . + . ID=g1357;Name=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS mRNA 175 2319 . + . ID=g1357.t1;Parent=g1357;Name=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 175 271 . + . ID=g1357.t1.exon1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 175 271 . + 1 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 498 598 . + . ID=g1357.t1.exon2;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 498 598 . + 0 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 888 972 . + . ID=g1357.t1.exon3;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 888 972 . + 1 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 1119 1193 . + . ID=g1357.t1.exon4;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 1119 1193 . + 0 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 1505 1552 . + . ID=g1357.t1.exon5;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 1505 1552 . + 0 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 1756 1903 . + . ID=g1357.t1.exon6;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 1756 1903 . + 0 ID=cds.g1357.t1;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 2123 2319 . + . ID=g1357.t1.exon7;Parent=g1357.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 2123 2319 . + 2 ID=cds.g1357.t1;Parent=g1357.t1 #PROT g1357.t1 g1357 VTAVEGTALNLVEDNGRVVGVSYKVKGSEEAKIIRAPLTVVADGLFSRFRKEIVANEPKVWSNFVGLVMKNVKMFQDNHAEVILAKPSPILVYQIGTNDTRVLVDIPGQLPSATSGDLRQYMDTVVVPQLPPHIKGPFVEALENDRLRSMPNSFLPPGIQERRGVLMLGDAFNMRHPLTGGAYMCGMSVALCDVVLWRDYLRTANLEDDDEFVDKMREFHWRRKGTHAFVVNTLAMALYKLFAAADGGY* # ORIGINAL: g1358.t1 original gene structure, not modified by PASA NODE_1424_length_11436_cov_39.2259 AUGUSTUS gene 3850 10145 . - . ID=g1358;Name=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS mRNA 3850 10145 . - . ID=g1358.t1;Parent=g1358;Name=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 9999 10145 . - . ID=g1358.t1.exon1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 9999 10145 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 9442 9849 . - . ID=g1358.t1.exon2;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 9442 9849 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 6891 9133 . - . ID=g1358.t1.exon3;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 6891 9133 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 6130 6646 . - . ID=g1358.t1.exon4;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 6130 6646 . - 1 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 5735 5881 . - . ID=g1358.t1.exon5;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 5735 5881 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 4738 5447 . - . ID=g1358.t1.exon6;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 4738 5447 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 4437 4510 . - . ID=g1358.t1.exon7;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 4437 4510 . - 1 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 4102 4250 . - . ID=g1358.t1.exon8;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 4102 4250 . - 2 ID=cds.g1358.t1;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS exon 3850 3912 . - . ID=g1358.t1.exon9;Parent=g1358.t1 NODE_1424_length_11436_cov_39.2259 AUGUSTUS CDS 3850 3912 . - 0 ID=cds.g1358.t1;Parent=g1358.t1 #PROT g1358.t1 g1358 MADPALERKYALLRRRLDHLGYRQALGFESIALVERIFADLVHTTESLKSAKAEAAQAKKELSVWEHQVEPLRRDNARLINENNLLHVRVIDMRESSVNTEKELKEAMYKMEAECRDLRFVNSQYVQRLRAEEAKNVAKSERISQLLEKNLGAVISTPDGGKKAYPPRRPRIEIKSPSKTPTKSKMADVRGSAADSNDSNVRIRAPAKYPGEIEINTVEIAERRIERLSGEVEQLKGEKRKLESKIESDADKMGAYRAEMQRLGKELEARQNVNRVHFDETLRAREREISMLKNHIDVLEGRLERDESSVKGLAGSDASGPYGNGNGRPSSSLEQEQALAERVIVQNRELMGRLKKAQATLAAAREAYCELAGVDMDEAEFAAAIEGRSGVGKGQSRAAVSGAVGAGLKDIESRFGELQSAVDRFQRRNEELEKQVARLSATGDDDVDNDVDGSDDGVRDGKSGRGDGRREGHLIEEISELRARNAYLCRELESIQDLMLRMDGGSRDAIAAAGAVSGVNGEWLRRVRIECHKFNRMLGRAGRGRGDALGGEEEDGTAATARDLADIEDVLASTVRCATECARMREDVARLEKTSERHLAEERMWRSLVDQSNGRRDGLASVLAEKDAELEDALAKLAASEGEVQRLSRSRNELLKAVEALAEDRIDETDVASSVRPGSRGSHAGSSTQAWGRASGRSSRSMEVNAASDEEGDVDSSVVVHGDDTLDDSGRWSAGRSRHVELLRRVLDSNDQLERRLEDSERKLADLAKEREKILFLYKEALDRNSGEHADAPANASAAIAGDHINAVVEELEAQRDTLSATLRRTKLECEQLRLRLAKANAHVQQLQSGVQRSGGVGGVGTGVRTSVSVSSENGEDEDDDEGMGTLTPSGAFAILQKENKRMSAELIETRRRCDEIEEELRAERSAKLHYESELDASKKRAEALSDALDRTDNDVSELNANTQVLEGKLREADDQVATLSSRVKIQTDEIVRLRAALASLDRRRDELDDETARHVETIAELRAQNDLQAALVVEKEGAIDELERELERAVARHRETEREFGALRTVHDRVQRDKERAEREKAAAETEVARMRTDDVQRLQRENQSLHRDLELSLAERDDLAKNVQRMARELLDVNELMAMKVVSRAPDVWDCIERERSTLMDSLRSLSDEREDLEDSIRDVAREKKTALTRAEASERIIEDLRRRLAAVAAREEAYTEDVTEFTEHAEALSQTILELETRLKAALEEREAMRADVQASRDMAANVSRSRESLQRRIASLEVELGRAQQAIADANAEKETNQMNVAAERGSRQELEAVVGNLRSQLSAMDAALNAVEGERDLLMRKVTLADDRVRDLSARIAETAQNVEERDRDRETLRRQVESAVVEMEGLRAQLEAERRSLREVRLSLDKQTDALRRKDDEAREMRRQLELTGMESDMRVAHEEQRSHRLHEQYRQLLQTVEQVTSANTGAAQTNTEQSTGSP* # ORIGINAL: g1344.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 22662 24418 . + . ID=g1344;Name=g1344.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 22662 24418 . + . ID=g1344.t1;Parent=g1344;Name=g1344.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 22662 22919 . + . ID=g1344.t1.exon1;Parent=g1344.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 22662 22919 . + 0 ID=cds.g1344.t1;Parent=g1344.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 23144 24418 . + . ID=g1344.t1.exon2;Parent=g1344.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 23144 24418 . + 0 ID=cds.g1344.t1;Parent=g1344.t1 #PROT g1344.t1 g1344 MAQARAPVGDWDSGSEGTNDGNDGGVYTGTPKSSHVDVRPVERQLNALEPTAELLEYYRQRVAESDDERNELLERIDKLEVAQEELHKLEWQLHQRDGEIRGLEKNLGEVALGLQQERENCVRLYAENERLRNQEIEDRKKIRLLLTMTQPVVPETTYIKSEDEAPLPRRMCPPRQLDGRGPGGHKRPPLVSTYASRPATDAGSAGASRRVSEPASDKEAKAKAEMESTSKESIMLELESLRRQVDAQKAQYRQHVEALYEDRVRAELAEQKRKDRDDVSIARLGERVKELEGSLVDTTRLLVESRCRWRRRESRLVEDNARLSFNAQRAQEMLDRHRIAAARDAVAFRKEVREQGESLVAMYRQQSLELEDKYAKLREEYGAMRSALTAAAERLSEKLRLERSQHERVKRRRSMEKEGFRVEIDTLRSSVKTLERSLVESAALLSALKAQVRVQAGDGVKGSLGVGISTRDIDALRIIYDSARQSKAVAGELQYLKAKIYGLETDLKRV* # PASA_UPDATE: g1343.t1, single gene model update, valid-1, status:[pasa:asmbl_5781,status:12], valid-1 NODE_324_length_26934_cov_41.8879 . gene 20682 21876 . - . ID=g1343;Name=g1343.t1 NODE_324_length_26934_cov_41.8879 . mRNA 20682 21876 . - . ID=g1343.t1;Parent=g1343;Name=g1343.t1 NODE_324_length_26934_cov_41.8879 . five_prime_UTR 21805 21876 . - . ID=g1343.t1.utr5p1;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . exon 21694 21876 . - . ID=g1343.t1.exon1;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . CDS 21694 21804 . - 0 ID=cds.g1343.t1;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . exon 21445 21546 . - . ID=g1343.t1.exon2;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . CDS 21445 21546 . - 0 ID=cds.g1343.t1;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . exon 20682 21296 . - . ID=g1343.t1.exon3;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . CDS 21099 21296 . - 0 ID=cds.g1343.t1;Parent=g1343.t1 NODE_324_length_26934_cov_41.8879 . three_prime_UTR 20682 21098 . - . ID=g1343.t1.utr3p1;Parent=g1343.t1 #PROT g1343.t1 g1343 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* # PASA_UPDATE: g1337.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5778,status:3], valid-1 # PASA_UPDATE: g1337.t1, single gene model update, valid-1, status:[pasa:asmbl_5779,status:12], valid-1 NODE_324_length_26934_cov_41.8879 . gene 1723 6615 . - . ID=g1337;Name=g1337.t1 NODE_324_length_26934_cov_41.8879 . mRNA 1723 6615 . - . ID=g1337.t1.1.5b6be70b;Parent=g1337;Name=g1337.t1 NODE_324_length_26934_cov_41.8879 . five_prime_UTR 6078 6615 . - . ID=g1337.t1.1.5b6be70b.utr5p1;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . five_prime_UTR 5842 5917 . - . ID=g1337.t1.1.5b6be70b.utr5p2;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . five_prime_UTR 5079 5480 . - . ID=g1337.t1.1.5b6be70b.utr5p3;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 6078 6615 . - . ID=g1337.t1.1.5b6be70b.exon1;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 5842 5917 . - . ID=g1337.t1.1.5b6be70b.exon2;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 4823 5480 . - . ID=g1337.t1.1.5b6be70b.exon3;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . CDS 4823 5078 . - 0 ID=cds.g1337.t1.1.5b6be70b;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 4244 4457 . - . ID=g1337.t1.1.5b6be70b.exon4;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . CDS 4244 4457 . - 2 ID=cds.g1337.t1.1.5b6be70b;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 3849 3982 . - . ID=g1337.t1.1.5b6be70b.exon5;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . CDS 3849 3982 . - 1 ID=cds.g1337.t1.1.5b6be70b;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 3355 3482 . - . ID=g1337.t1.1.5b6be70b.exon6;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . CDS 3355 3482 . - 2 ID=cds.g1337.t1.1.5b6be70b;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . exon 1723 3091 . - . ID=g1337.t1.1.5b6be70b.exon7;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . CDS 1895 3091 . - 0 ID=cds.g1337.t1.1.5b6be70b;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . three_prime_UTR 1723 1894 . - . ID=g1337.t1.1.5b6be70b.utr3p1;Parent=g1337.t1.1.5b6be70b NODE_324_length_26934_cov_41.8879 . mRNA 1723 6613 . - . ID=g1337.t1;Parent=g1337;Name=g1337.t1 NODE_324_length_26934_cov_41.8879 . five_prime_UTR 6470 6613 . - . ID=g1337.t1.utr5p1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 6078 6613 . - . ID=g1337.t1.exon1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 6078 6469 . - 0 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 5842 5917 . - . ID=g1337.t1.exon2;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 5842 5917 . - 1 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 5177 5480 . - . ID=g1337.t1.exon3;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 5177 5480 . - 0 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 4823 4987 . - . ID=g1337.t1.exon4;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 4823 4987 . - 2 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 4244 4457 . - . ID=g1337.t1.exon5;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 4244 4457 . - 2 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 3849 3982 . - . ID=g1337.t1.exon6;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 3849 3982 . - 1 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 3355 3482 . - . ID=g1337.t1.exon7;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 3355 3482 . - 2 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . exon 1723 3091 . - . ID=g1337.t1.exon8;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . CDS 1895 3091 . - 0 ID=cds.g1337.t1;Parent=g1337.t1 NODE_324_length_26934_cov_41.8879 . three_prime_UTR 1723 1894 . - . ID=g1337.t1.utr3p1;Parent=g1337.t1 #PROT g1337.t1.1.5b6be70b g1337 MLCGTSVQVAHVLTNDICILRVCMYAHVRAGGLAAPLIAAGAGTFIGAGGAGFLATTSGAALLGVLFGTAGGGLTGFKMARRTGSVNEFSFEHLGRTSGLHAVICVTGWLGAKSHTFARPWRHLQECGDRYSLRWESKELRNLGRVIEDMITSQIIGYAASQAIQQTVLAGLVAAIVWPAALLQVADIIDNPWGICMSRAEEAGKVLADVLSRRLHGHRPVNLIGYSLGAKIIFHALEELAGRKVPVRGIIGDVFIFGAPIPAGGERWIRARSVVAGRFVNGYCTSDWLLKFLYRTASAERSAAGLGPVGEDGRSGIAESSGENSKNSGTAYGEKGSKEDEATPFNFDAELTVTHSALLRVENVDVTPIVKGHTDYGRRMGLILLKLGLAEDGYTGESQYEGSSSDEDDGADADDVDDGDDGDAQMKEVEAKLNAILTPEEQEQRRLKRQRRAEKRREKRRRASATRTADVHVASAREEPRVTGLSSCGDGGGETLSFSDAHFGVSVDPVDLISRHQDDASMATSQAVSAIPIGAVPNVIIAESAPDVVGESMCASKSESKSEFPTNDSNQLQSEKHVEAAGASTELSTNAGETPLLTSDERIAASCATFPLAMSDSTETYVETTDDDPNVRALTWSIEEES* #PROT g1337.t1 g1337 MKAFFGKMGIGKDAPEDDATDVRSGSPEPSRLSRALLGFSVKKSSESKGGARAAVEEEAEALDAIATDGWKAPEVIGDLPVHKRYAYAGLVASLLPHSHSGGDAADVDSAWASEYINRLLERLGLPETSQGSIVEIMRGAIPDALDVFAAEFTSDSDPEGSTAPWIAMQDVIHFSIHDGCYDSRARTAALRLTSLVGIPARCAVEYEDALAEELRIGEMESDAERDERLRSEKKKKRKRYLLVGLAAIGGGVAIGLTGGLAAPLIAAGAGTFIGAGGAGFLATTSGAALLGVLFGTAGGGLTGFKMARRTGSVNEFSFEHLGRTSGLHAVICVTGWLGAKSHTFARPWRHLQECGDRYSLRWESKELRNLGRVIEDMITSQIIGYAASQAIQQTVLAGLVAAIVWPAALLQVADIIDNPWGICMSRAEEAGKVLADVLSRRLHGHRPVNLIGYSLGAKIIFHALEELAGRKVPVRGIIGDVFIFGAPIPAGGERWIRARSVVAGRFVNGYCTSDWLLKFLYRTASAERSAAGLGPVGEDGRSGIAESSGENSKNSGTAYGEKGSKEDEATPFNFDAELTVTHSALLRVENVDVTPIVKGHTDYGRRMGLILLKLGLAEDGYTGESQYEGSSSDEDDGADADDVDDGDDGDAQMKEVEAKLNAILTPEEQEQRRLKRQRRAEKRREKRRRASATRTADVHVASAREEPRVTGLSSCGDGGGETLSFSDAHFGVSVDPVDLISRHQDDASMATSQAVSAIPIGAVPNVIIAESAPDVVGESMCASKSESKSEFPTNDSNQLQSEKHVEAAGASTELSTNAGETPLLTSDERIAASCATFPLAMSDSTETYVETTDDDPNVRALTWSIEEES* # ORIGINAL: g1340.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 14197 14670 . + . ID=g1340;Name=g1340.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 14197 14670 . + . ID=g1340.t1;Parent=g1340;Name=g1340.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 14197 14670 . + . ID=g1340.t1.exon1;Parent=g1340.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 14197 14670 . + 0 ID=cds.g1340.t1;Parent=g1340.t1 #PROT g1340.t1 g1340 MVNARVFVAVALILSTSCVLDALPIEPSAVPKDLEAFASSPANAPAQSSSVAQNIRVNGAATTDAPSGADVPSTDDETREQSAGIIMDVVGVILVVTVVIVGGVLGGMHLRNSNCGRGTAKDETEAYSLIETKAARADKHAYSETIEVEYGALQVTK* # ORIGINAL: g1338.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 6945 9560 . - . ID=g1338;Name=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 6945 9560 . - . ID=g1338.t1;Parent=g1338;Name=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 9421 9560 . - . ID=g1338.t1.exon1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 9421 9560 . - 0 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 9232 9284 . - . ID=g1338.t1.exon2;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 9232 9284 . - 1 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 8926 9053 . - . ID=g1338.t1.exon3;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 8926 9053 . - 2 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 8532 8630 . - . ID=g1338.t1.exon4;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 8532 8630 . - 0 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 8225 8377 . - . ID=g1338.t1.exon5;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 8225 8377 . - 0 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 7838 7926 . - . ID=g1338.t1.exon6;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 7838 7926 . - 0 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 7260 7681 . - . ID=g1338.t1.exon7;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 7260 7681 . - 1 ID=cds.g1338.t1;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 6945 7066 . - . ID=g1338.t1.exon8;Parent=g1338.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 6945 7066 . - 2 ID=cds.g1338.t1;Parent=g1338.t1 #PROT g1338.t1 g1338 MAPPIDTILDDLCSRFILNVPAEELSSFERILFQVEQAQWFYSDFYREQWPELRNYSPREFAALIFRHCPILQPFAEQTEAFFKKFMEYKFLIPVCGAIIINEKLDKALLVKGWASRASWGFPKGKINKDETEANCAIREVMEETGMDVSSLIKENDYVEVVIHEQKTRLYFIVGVPESTQFNPQTRKEISRIEFFKIEDLPTSRDSGASNKFFLVAAFIGRLKSWLSKHGKTRLKANQEALSRLVIAPAPSVPLTPQRSLANNMPGGNGMYGSPIATQPMAPKGTAWPHLELGPPIIPLGPSGSMDAVFGVPHHNVAVASLSRQGAAYGPSFEAVRSPLTTASGDPSLDALRAMLGMGGAGSLAGANQTSAPNPHSAHASANAFLSFCFDKDAILASLML* # PASA_UPDATE: g1342.t1, single gene model update, valid-1, status:[pasa:asmbl_5777,status:12], valid-1 NODE_324_length_26934_cov_41.8879 . gene 16936 20448 . + . ID=g1342;Name=g1342.t1 NODE_324_length_26934_cov_41.8879 . mRNA 16936 20448 . + . ID=g1342.t1;Parent=g1342;Name=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 16936 17196 . + . ID=g1342.t1.exon1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 16936 17196 . + 0 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 17403 17511 . + . ID=g1342.t1.exon2;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 17403 17511 . + 0 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 17625 18531 . + . ID=g1342.t1.exon3;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 17625 18531 . + 2 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 18732 18810 . + . ID=g1342.t1.exon4;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 18732 18810 . + 1 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 19044 19361 . + . ID=g1342.t1.exon5;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 19044 19361 . + 0 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 19666 19765 . + . ID=g1342.t1.exon6;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 19666 19765 . + 0 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . exon 20038 20448 . + . ID=g1342.t1.exon7;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . CDS 20038 20351 . + 2 ID=cds.g1342.t1;Parent=g1342.t1 NODE_324_length_26934_cov_41.8879 . three_prime_UTR 20352 20448 . + . ID=g1342.t1.utr3p1;Parent=g1342.t1 #PROT g1342.t1 g1342 MANARGGDDGPRVAEAFVEKVYENQRSGLFGGFTTAWLLPTERRAWSDKDGNEMCSKEEFDLPDNSWSWASDWVVEKRKGVDDDGWEYAINWSTGWVDRVNSHTFVRRRKWTRERRRLIAPSPVISARVERPQSSSPLKATPSQQSQQQQQLQSQSQSQVQPQGPTRSQPRAIEISQQDAKRSQQQQQQQQQQQQLSQVSNKLATIPHSVEEDLPASVQTSGDSLVSKVSRMVRSPTVASRTRTGAVTEGSDSRNWTPERTPPTSPAQRALSPVPILDGDALPLPISDIHHASETQGRERDHHSGSETSVVSNESSSTFVARDGAMNRSGSTTSWGSQQAPPELRARVYANRDKRMEEKDSMISFLKDQLQRTMEKQLRMDREMISLKKGESEEVKVLEERLARSDENGRRMAKMVADLQKELKDSKAETKEVKRRASTAAPKATLPLPIPEAIPAGSMSAPASQSVLAASNPANDPPTAASASDVTEVVYENQRSGLVGGFSTDWLLPKLDARGAWSREDGTPVWHKDALALPDDSWDWITSWGIDMSGNVDGEGWEYAFSWWEGAWTNSARSHTFVRRRKWIRKRARRQGLLAEGTPLSALAVGERAEIRSRSLSFVPVEGSSVVAFPPFPGVLSKHRPDSIVSISFLVVCGLLFLALALSVAMHTRVNGLIAAMDGSDLLKYELRSEDQKCF* # PASA_UPDATE: g1341.t1, single gene model update, valid-1, status:[pasa:asmbl_5780,status:3], valid-1 NODE_324_length_26934_cov_41.8879 . gene 15108 16487 . - . ID=g1341;Name=g1341.t1 NODE_324_length_26934_cov_41.8879 . mRNA 15108 16487 . - . ID=g1341.t1;Parent=g1341;Name=g1341.t1 NODE_324_length_26934_cov_41.8879 . five_prime_UTR 16384 16487 . - . ID=g1341.t1.utr5p1;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . exon 16267 16487 . - . ID=g1341.t1.exon1;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . CDS 16267 16383 . - 0 ID=cds.g1341.t1;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . exon 15879 15977 . - . ID=g1341.t1.exon2;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . CDS 15879 15977 . - 0 ID=cds.g1341.t1;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . exon 15108 15660 . - . ID=g1341.t1.exon3;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . CDS 15280 15660 . - 0 ID=cds.g1341.t1;Parent=g1341.t1 NODE_324_length_26934_cov_41.8879 . three_prime_UTR 15108 15279 . - . ID=g1341.t1.utr3p1;Parent=g1341.t1 #PROT g1341.t1 g1341 MADSWEYSTMASDSLVAAVCFHCAWLFFTARRRQSYLGVIGCLIIGVAASVGVLRFGPRPDLIPLHKYLAAAGACISFPLFGYASLRRWESRFAVKSPLGEWFVFGLAVALFIGRTTKGVLPAEHHELYDTVIPFIGLLGVISQSFLTAGGVGAIGAAIIILMSLGIGDEGLLFGIPRVDIFHVGLALGLRMITEETK* # ORIGINAL: g1339.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 10334 12323 . - . ID=g1339;Name=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 10334 12323 . - . ID=g1339.t1;Parent=g1339;Name=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 12214 12323 . - . ID=g1339.t1.exon1;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 12214 12323 . - 0 ID=cds.g1339.t1;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 11980 12003 . - . ID=g1339.t1.exon2;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 11980 12003 . - 1 ID=cds.g1339.t1;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 11664 11823 . - . ID=g1339.t1.exon3;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 11664 11823 . - 1 ID=cds.g1339.t1;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 10636 11334 . - . ID=g1339.t1.exon4;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 10636 11334 . - 0 ID=cds.g1339.t1;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 10334 10435 . - . ID=g1339.t1.exon5;Parent=g1339.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 10334 10435 . - 0 ID=cds.g1339.t1;Parent=g1339.t1 #PROT g1339.t1 g1339 MTRHHVTHDEAVALKRDRAVKDALAQERRAHRGGRTRDEAVAFVKFENQLKVIGLRVHDVPGDGNCLFRALGDQLYGNENGHARYRAETVAFMRLNRADFEPFMEDDVPFDRHVRNLEEDGTFAGNDAIVAFSRLNHVNVCIHQQGLRMWDVVIDPKYPALHVGYHDGNHYSSLRAIGEPEGVPSRAGELFAIAQAKLGGSGGSAAALGKKGGRGGDGSRIKQKSSAWNYEDAGCGYDYAEEYDGGESGESGEGTGCAGECASPTHAEEDHREKHDSQIDAADKAITDVCDIAAKCGLSPESSCRSSPPKKAANAPQKKLSNRERKELAKQEKKKQRQTKSSLPAAVEGPVDPLVAAAMQSMRI* # ORIGINAL: g1336.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 228 998 . - . ID=g1336;Name=g1336.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 228 998 . - . ID=g1336.t1;Parent=g1336;Name=g1336.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 474 998 . - . ID=g1336.t1.exon1;Parent=g1336.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 474 998 . - 0 ID=cds.g1336.t1;Parent=g1336.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 228 307 . - . ID=g1336.t1.exon2;Parent=g1336.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 228 307 . - 0 ID=cds.g1336.t1;Parent=g1336.t1 #PROT g1336.t1 g1336 MEALRMGVVATAASALSVASLVASSCGFKTQRGAFLAGVSIGLIPVVTWAVLSYRFNDDGGNLVCCILDKLEAHKFRRDLRRRPKRIILVRHGESEGNIDPEIYAHVPDSKIQLTEVGKAQAREAGKALRAIIGNESCMFYVSPFQRTRQTYAELSKAFVPAQCKMREDPRIREQECGNFQFTEQWKDYRDQRYVVGRFFF # ORIGINAL: g1345.t1 original gene structure, not modified by PASA NODE_324_length_26934_cov_41.8879 AUGUSTUS gene 24949 26533 . - . ID=g1345;Name=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS mRNA 24949 26533 . - . ID=g1345.t1;Parent=g1345;Name=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 26430 26533 . - . ID=g1345.t1.exon1;Parent=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 26430 26533 . - 0 ID=cds.g1345.t1;Parent=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 25293 26277 . - . ID=g1345.t1.exon2;Parent=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 25293 26277 . - 1 ID=cds.g1345.t1;Parent=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS exon 24949 25077 . - . ID=g1345.t1.exon3;Parent=g1345.t1 NODE_324_length_26934_cov_41.8879 AUGUSTUS CDS 24949 25077 . - 0 ID=cds.g1345.t1;Parent=g1345.t1 #PROT g1345.t1 g1345 MGGVTELAIAPTKPGEERDLAIELVAPAEEGRHVGYWRLSLPDGTRFGHRVWVDITVDLVASKKALPMKEQATAQTPRGYSPFSLVRSILGRVGVTGSTAPPATTTSTTAVTTTAATTTAMKSDLQGYPSSSASVVAGGHRRSASHSSAYGGISAASHDAQPMRRMSTPPLSAVPEREIDSRGKLPMHVTAGRTPPDEGLDVSSNSPPSPSLFRRSSSPACVQSHPLLLRAHSFGEKTSHGGLALRPRDADHSTMEASPLTIENVHLLQNLLRREDGSHAKGHRGTALLARSASRTSSVHSGESVENQWGCAFPRAPASPRQSSGAWDVDCGSPNTARSAVRHHTETTQSNDMRTTERPDFESERFTLILKRRLRELGIAEEALCSREAIVRAATLFLLEPAASK* # ORIGINAL: g5973.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 17999 19618 . + . ID=g5973;Name=g5973.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 17999 19618 . + . ID=g5973.t1;Parent=g5973;Name=g5973.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 17999 19618 . + . ID=g5973.t1.exon1;Parent=g5973.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 17999 19618 . + 0 ID=cds.g5973.t1;Parent=g5973.t1 #PROT g5973.t1 g5973 MAVHSTRVIGSIAAAARSCGPFALRPVHTRFICGQSVHTSSQTASSPPLRNSAYPALPGDSLTNNGWDAHEPVDFKGISVPLPPELLPGAGRGIKVVVGVSGGVDSSVSALLLKRAGYDVHGVFMKNWDSRDEGGSGAVCTADEDILSARRTCETLDIPFSDVNFVKDYWLGVFEEFLRDYAEGITPNPDVLCNREIKFSKFFDHAVGRLGAHYVATGHYARVRRRTSMGTVHPGSDAQTVQLVKSRDLRKDQTLFLCWVPASALARTIFPIGHLEKTTVKEIAHRSGLSHSAQRRESMGICFVGKRSFSDFISDFIPDNPGDVVTIDGRVVGKHRGLHHMTIGQRARISGLATAALVAWKDVAGNRVVVVDGSTHPLLYSRALVTLPGHWMAGVHPLRSSFQQQMSGAAANSDTGGEILQSARLDMRFRHQTPLIPCRVSQREDAGHDGLLVRADGIENTAFMKMVTPGQVAVFYDGDVCLGGASIECAAEVGHGGSVRLWNDVVRSAMSESGPMREAATSLKVLKKDASARKHTQNI* # ORIGINAL: g5975.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 23551 24725 . - . ID=g5975;Name=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 23551 24725 . - . ID=g5975.t1;Parent=g5975;Name=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 24603 24725 . - . ID=g5975.t1.exon1;Parent=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 24603 24725 . - 0 ID=cds.g5975.t1;Parent=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 24242 24316 . - . ID=g5975.t1.exon2;Parent=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 24242 24316 . - 0 ID=cds.g5975.t1;Parent=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 23551 23982 . - . ID=g5975.t1.exon3;Parent=g5975.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 23551 23982 . - 0 ID=cds.g5975.t1;Parent=g5975.t1 #PROT g5975.t1 g5975 MEGFEASAVLVKDLLALQKDAVHYHQVLLKSIASDALERHKKKADAKLSALVPLAQEMLGIHSMMTTLLHEIRSSSYDRFLPLWEHHVALFQEVKPLLQHDKDNAFTGPLLDFVMPFDVVSEAHQQPTTPIPTTSEKPADSLNLQPIPVNISAHHHQKSGATGSTSTSNIPPDVQRELEALRARVVELELQHAEDVHTIAAMKAVGLVS* # ORIGINAL: g5969.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 3461 4822 . + . ID=g5969;Name=g5969.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 3461 4822 . + . ID=g5969.t1;Parent=g5969;Name=g5969.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 3461 4822 . + . ID=g5969.t1.exon1;Parent=g5969.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 3461 4822 . + 0 ID=cds.g5969.t1;Parent=g5969.t1 #PROT g5969.t1 g5969 MCRATSVSHSFGESSPSSPSSCTFPEDVSSNHAGEAIAISGIDKGLCSLVAIRDIERMKSERVCDLKNRRLEDVPPGAIPDDATEVNLRRNLLTALPSDVLRLVCIRTLHLSCNRFASFPEEICLMTTLECLYMSDNGLVELPSSIGRLRNLTVLRLCRNNLRGLPEEIGNLTKLTTLALGSIYGGNVIASLPASIGRLASLVEMDVSNNMLVELPREIGYLPSLRILNASCNSIASLPASIGDLSALHSLNLRQNCLRILPAEIGRLSNLAILDVVDNRLVLVPGELRSLKRHAALLMHGNPFVDWENADSGARDIQEHIDTGTRAPSTPAGDGLDLPASHGRLGSIADKLDLSACSSVPRQQAMGLLELAGRAVVRSGIDFESAAIPVELKVHLRRARECDQCGRPYIELCHKYVERRSILGHTHVPSVLSRCSVTCCATKCDATAKSLSW* # ORIGINAL: g5970.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 5225 7499 . - . ID=g5970;Name=g5970.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 5225 7499 . - . ID=g5970.t1;Parent=g5970;Name=g5970.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 5619 7499 . - . ID=g5970.t1.exon1;Parent=g5970.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 5619 7499 . - 0 ID=cds.g5970.t1;Parent=g5970.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 5225 5344 . - . ID=g5970.t1.exon2;Parent=g5970.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 5225 5344 . - 0 ID=cds.g5970.t1;Parent=g5970.t1 #PROT g5970.t1 g5970 MTEVLMLHSTTNCDYVVGARSTPSDASISSTLMEHIVVVKANGHDGSRDESTDPSVPVGDMEDLPILTVMSDAERYFGIVRASPDDFDAWAVLLDIVEQDNNEDCIKAAYDEFLTLYPYCHGYWKKYADLSLSFGGDVSCRAVYERAVAAFPRSVDLWVDYVAFAAEMHIESSSHIRALFARGEALLTHEWHSAPFWDAYAGWEAAQGNIGRVFQLYDRILRVPFDQCTGRIIDRITDMATSHPPKSLLTEAEFAAETTAAREAHPGETDAAIESHVRQRVLALRRQVAAATDMEAAKRRRFELLITRTFFQVRALADDQLDAWRTYLDFEEREGSEDRVVHLYERCVVVCALYDEFWIRYARRASAMGKVDAARAIYVRAGDIHLRKRHSVHVARAQFEESLGNVELAKAAFARLDTLSVSADAVDRRANFERRVNGFQAAIAVYDTALARLGDMQPRVSAYMGARRAGVQLRSGNVSACKASLRGLIERFPDSKHVYVRLLDVELNHGDASDRVSRVVGVFDLVAHSTLPLDTKCGFAVRRAEFLDDEGMSVVDVLESDARLQRLTASIARPSDCRAKRTLVDMSGADSHYGDACAPPGKAVRYAPPPATPVAMAAVGAGYGQQQAYVPHNGMGGPMRNGPSAFQPMRHHSFAAQGQSQSSISN* # ORIGINAL: g5968.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 538 2541 . - . ID=g5968;Name=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 538 2541 . - . ID=g5968.t1;Parent=g5968;Name=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 2408 2541 . - . ID=g5968.t1.exon1;Parent=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 2408 2541 . - 0 ID=cds.g5968.t1;Parent=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 2178 2259 . - . ID=g5968.t1.exon2;Parent=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 2178 2259 . - 1 ID=cds.g5968.t1;Parent=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 538 1857 . - . ID=g5968.t1.exon3;Parent=g5968.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 538 1857 . - 0 ID=cds.g5968.t1;Parent=g5968.t1 #PROT g5968.t1 g5968 MLDCLPLEIASRVFDLSFGNARIRRANVVSQLFPGRTSLAWIGVRSITTLIFDDLMSAQDDDRLITDSAIVAREIDADIGAALASLFIVTGITSLSMEGYLFDDSNGDSFGFLSAFCRQSAHSLNSLRIDMRTAVDVIGYSDGEAIPGACLALMTALRELRHLRSFHLGFRSTNSGHGIPYVARCLVDSCPNIKHVTFKYDGDHREGGVKRGTLCELSNVDAHLRLARKRTPLALQSQQQQEQQHAIDFHSMASPCAVPRDAIRGKIPPIRHLAIECCADAEDVCVATNRLELVTFASKGPLSINDGTLGNLARMQSLRDVRISVGSFVTPLLVDELCTAPQLRSIHLTLRSVVGGSTFDGLFKLSGRGPGSLDANSGALIAQSRYTALVTLCIIRKDWECVDDLILRAASACTAIKALVLCRGQVACTAFCKLVEAQVQLTSVDLREVVIEETADVNAMHAESHARVVDALLRAPCLRTFTETSSLALSCDDIARFVAKGVVVSDGGMGP* # PASA_UPDATE: g5974.t1, single gene model update, valid-1, status:[pasa:asmbl_6546,status:12], valid-1 NODE_378_length_25477_cov_41.9049 . gene 20108 23026 . + . ID=g5974;Name=g5974.t1 NODE_378_length_25477_cov_41.9049 . mRNA 20108 23026 . + . ID=g5974.t1;Parent=g5974;Name=g5974.t1 NODE_378_length_25477_cov_41.9049 . exon 20108 21522 . + . ID=g5974.t1.exon1;Parent=g5974.t1 NODE_378_length_25477_cov_41.9049 . CDS 20108 21522 . + 0 ID=cds.g5974.t1;Parent=g5974.t1 NODE_378_length_25477_cov_41.9049 . exon 21765 23026 . + . ID=g5974.t1.exon2;Parent=g5974.t1 NODE_378_length_25477_cov_41.9049 . CDS 21765 22515 . + 1 ID=cds.g5974.t1;Parent=g5974.t1 NODE_378_length_25477_cov_41.9049 . three_prime_UTR 22516 23026 . + . ID=g5974.t1.utr3p1;Parent=g5974.t1 #PROT g5974.t1 g5974 MNSTTDPEYHSDASRLYFIGATISIFFCVLIIVLYAMFPKHRRHPSPIVLYRSLCDVAFCVAHIISYGLDEPEGGSSACKALSMVNQAAAFASNAWYLMLSVDLFLAIRNPFSSHNEYTPFYHIAVWGMSAATALILAVANRWGLSMFLFCWIRVENKDDLNLYSWFLFYAPIMAITIISGAVWILAKVSLTNDNTDSDAIRQRVLKQGVAYVAAFSVYWAFTGAVWIAQFVHVRDSESDLAYTSFPLIVVFSITIGFRGFLDAVMWIRNNKVTPRLFWDRLCEICAHARLRLSSSRNVQTSASLVQPLLATASNTPLSSAGGEVDEPINKILRRDVMRLISYGIYLRAIKPDDDESRTSSRTSRGLSFASTGTSAHDVHSNVGMSIAMTSMMSPRTDEVVREQLPRPFGSGTYEFVDYAPGVFAGIRHIRGITPEDYRRSFVMEENQEAQMLEKFTDGRSGSFFYFCHDMRYIVKTVNETEKNLLLHILPEYHDYMIRNQNTLLAPIVGLHSVRKSWENKLITFIVMSNTFLTDLPERDETNTKVYLEKYDLKGSWIDRATFKAPQVDDLGRTDKTLKDADLERRHVRVKIGHSAREIISQQILSDATFLESVNIMDYSMLVGIRHRPVKQDDANYASLSITVNSHVPLHRRCHGGLPSEDGESLYFLGIIDMLQGYDINKKFEHFAKANVLRKDKRGISAVEPQWYRERFVEAMRKLIV* # ORIGINAL: g5971.t1 original gene structure, not modified by PASA NODE_378_length_25477_cov_41.9049 AUGUSTUS gene 8394 9894 . + . ID=g5971;Name=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS mRNA 8394 9894 . + . ID=g5971.t1;Parent=g5971;Name=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 8394 8414 . + . ID=g5971.t1.exon1;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 8394 8414 . + 0 ID=cds.g5971.t1;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 8503 8857 . + . ID=g5971.t1.exon2;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 8503 8857 . + 0 ID=cds.g5971.t1;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 9086 9147 . + . ID=g5971.t1.exon3;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 9086 9147 . + 2 ID=cds.g5971.t1;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS exon 9439 9894 . + . ID=g5971.t1.exon4;Parent=g5971.t1 NODE_378_length_25477_cov_41.9049 AUGUSTUS CDS 9439 9894 . + 0 ID=cds.g5971.t1;Parent=g5971.t1 #PROT g5971.t1 g5971 MASLIKKFVHGAALRLMNKRNLQRDLDLYRLYLLAMHHEKYTAAVANAPNLDHEPHIELSNKVPSAFAQEAYVYKSVDAQIRSLCSAIHKHSTEVDAGSDVTDALVASFRLRLRKSSVPHPDSGMGVFLEGRVSPGTVVAFYPGHVYQPYDISKHPKYPNFADGNDLLVARYDGIVIDALTYAGNIQRAADRKKSSWFSEPDPLADIADERRSRENRGAPHPYALGHRINHPPANTAPNVMLCPYDFMESFPLELRRYIPNKYKVAPGFLFAQQNCIVQSLVLVATKTICDGELFLK* # PASA_UPDATE: g5972.t1, single gene model update, valid-1, status:[pasa:asmbl_6544,status:12], valid-1 NODE_378_length_25477_cov_41.9049 . gene 10495 17711 . - . ID=g5972;Name=g5972.t1 NODE_378_length_25477_cov_41.9049 . mRNA 10495 17711 . - . ID=g5972.t1;Parent=g5972;Name=g5972.t1 NODE_378_length_25477_cov_41.9049 . five_prime_UTR 17637 17711 . - . ID=g5972.t1.utr5p1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 17595 17711 . - . ID=g5972.t1.exon1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 17595 17636 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 17235 17363 . - . ID=g5972.t1.exon2;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 17235 17363 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 16859 16953 . - . ID=g5972.t1.exon3;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 16859 16953 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 16406 16510 . - . ID=g5972.t1.exon4;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 16406 16510 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 16048 16153 . - . ID=g5972.t1.exon5;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 16048 16153 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 15742 15813 . - . ID=g5972.t1.exon6;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 15742 15813 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 15351 15444 . - . ID=g5972.t1.exon7;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 15351 15444 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 14980 15116 . - . ID=g5972.t1.exon8;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 14980 15116 . - 2 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 14579 14715 . - . ID=g5972.t1.exon9;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 14579 14715 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 14126 14256 . - . ID=g5972.t1.exon10;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 14126 14256 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 13870 13943 . - . ID=g5972.t1.exon11;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 13870 13943 . - 2 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 13556 13683 . - . ID=g5972.t1.exon12;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 13556 13683 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 12884 12983 . - . ID=g5972.t1.exon13;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 12884 12983 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 12336 12649 . - . ID=g5972.t1.exon14;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 12336 12649 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 11940 12075 . - . ID=g5972.t1.exon15;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 11940 12075 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 11552 11774 . - . ID=g5972.t1.exon16;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 11552 11774 . - 0 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 11320 11377 . - . ID=g5972.t1.exon17;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 11320 11377 . - 2 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 10908 11050 . - . ID=g5972.t1.exon18;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 10908 11050 . - 1 ID=cds.g5972.t1;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . exon 10495 10670 . - . ID=g5972.t1.exon19;Parent=g5972.t1 NODE_378_length_25477_cov_41.9049 . CDS 10495 10670 . - 2 ID=cds.g5972.t1;Parent=g5972.t1 #PROT g5972.t1 g5972 MGFRGKRRHQGGHKGGGKRRHVTKEGEEGGDKAGHFSRPNVWKSIVKDNALFQSYYKSLSIVPESDWEAFLAAMRDDLPTTFRITGSRSFAKDVRNCLEKHYIPHLDNVVIDGEEVRAPEAIPWYPERLAWKVCTHKRTVKKLPEYAKLQKFLVAESERGNLSRQEEVSMIPPIVLDVQPHHKVLDMCAAPGSKTAQLLESLHTVPEGRPDEPPTGFVIANDADNKRCYLLIHQAKRLQSPHLVVTNNDAAFYPSLRVRESPSSPSIPLLYDRILCDVPCSGDGTMRKNPTIWSSWNPLNAAGLHNLQARILTRGLQLLAVGGILVYSTCSLHPLENESVLAEILNKYAGLIEIVDVADKVGSLKYSKGLTSWTVMDKAGITYEKFSDIPAEHVMRKIVTETHFPPANAAELGLEKCIRVFPHQQNSGGFFIAAIRKLRAVGTTDNLADKIMARAEARKAAAAAAAAAAQTDSLVAASATAAIEADDAEIEAELAKEAETASGGSSGGASGAAAGASGGARGGSKGDDKKQQLGEYKENPFILLNEESPALVEISKFFGLSADFPYTQMMCRSEEGQRNLYMIAPGIRDILKGNLQSTARIVNTGVKVFSKSHAEMAACPYRIMQEGLHALVPYLRNSSRFVEGTYEDIITFFTVENSKAEAFSLPLQQVAERISKEMGSIIVHYDPIKYPDPRCIMEQPVTISVWRGRGTLRALVTAGERDSLLVMLRGPTADDDSAVSKGKAPASANDAADGDAQGDAEIVDADGADGADDALDADVDAMGEDDDDAADAQMDIAHE* # ORIGINAL: g19.t1 original gene structure, not modified by PASA NODE_2543_length_5952_cov_43.0219 AUGUSTUS gene 1011 4643 . - . ID=g19;Name=g19.t1 NODE_2543_length_5952_cov_43.0219 AUGUSTUS mRNA 1011 4643 . - . ID=g19.t1;Parent=g19;Name=g19.t1 NODE_2543_length_5952_cov_43.0219 AUGUSTUS exon 1011 4643 . - . ID=g19.t1.exon1;Parent=g19.t1 NODE_2543_length_5952_cov_43.0219 AUGUSTUS CDS 1011 4643 . - 0 ID=cds.g19.t1;Parent=g19.t1 #PROT g19.t1 g19 MASLGRHWPRIARRVAVGRPPPRVCPSTLRQYHGAASSYNAPLAWRRCGIDLPQLPQLRRAPTLPIGGITAHVFARLPYVPSRTLHRIGAATIGRSFSSVPKHVRVEDDGASSLSTATEGEGVEEESAYASESFHDFFLVREFVSPDAAVPVLQRYATTVERSGQADTEAIMHVLELLMELRSRTLADLNMPQTVATTSSKADQMERALARRGSLYSPNAPIVRSLHYAIAVHVHNNGLLNEAMLQRYSMFMSVFGGGVSVYNLYVQYAARGGLFKEPKTLSLGMHAIRMDRVFPIPAIVALWQEALATNDPVIVSYALLVYLQCLAARSMWSDMIEGYRAAKYMGARITGRHIAVICAKMLSFRNPAPDGKDTMPWAYIAAVVPDLWVELAPNRINDRRAAQASILGKIASFTDIPSAVNVLEAIVESDTADLISLCGQELRRPIVPQPVFVAQLCLAMAPSCETKEDREEIMLVLRDHGAKPLPKMWPQLMVGASRRNMAYTRLFHNEFPDWWEPLPMEDILGRPVLEREAEFDPYEGTEYGKDLTGQGDPEPAAAADNDAEAFDAESTAEEIVDLLHSGNNIQSKEDEEEHSHMQLKPVMQIPGRNLDPRHTFVRGKESIPHVLALMDEWGMRPHVDFVLQLYLTDQLSHEGLVAFFAKATPSARHKMLQQVLLRKRHPGVDECVRLVIDLVKACPDYIPDQLTVDRLFEGCANRSKAKQASELVIVLGQELGIKLSERNYIHILMAAASTGSDVRMGEMVYDHMQSEGYTLTDAVVEAALMVCTPVAVEMGFDPKSVRVDFAARIVLDMAKTGIAPSTAVLNAALRFFVNNGRVDCALRVLRRGVVADEESNTRAVDAKYFAEADSIDFQGVDASAVDHWAEEGAVFDGPGRHALAASTPEEADEQSGDPYGWIADVLCATATPVGFPSVESFIALAWSCETPEDRRRLLGFMADHGIAPSTQLALPFLKGGLARVYADPQARVMDADRLRDAEEVTRDIVNNLGIPLSHSDILWLKRLSRARTISPLCLLPVTRAANLIPTPLIVRLTMQWFVGVGLQAQALRVFDLMLAGEFGETFNPDTYYYAMLACTTFPAPEKRVKYASRVIEAACLSLHRVGNILFMYAAAAAESGDLEVIDDALRRLGSRSVTMDNPGIEKLRRKQFVRRERTSKFAVIFKRRIETERRRIIANTRGFRRNLGGLDDVD* # PASA_UPDATE: g20.t1, single gene model update, valid-1, status:[pasa:asmbl_4526,status:12], valid-1 NODE_2543_length_5952_cov_43.0219 . gene 5298 5952 . + . ID=g20;Name=g20.t1 NODE_2543_length_5952_cov_43.0219 . mRNA 5298 5952 . + . ID=g20.t1;Parent=g20;Name=g20.t1 NODE_2543_length_5952_cov_43.0219 . five_prime_UTR 5298 5317 . + . ID=g20.t1.utr5p1;Parent=g20.t1 NODE_2543_length_5952_cov_43.0219 . exon 5298 5533 . + . ID=g20.t1.exon1;Parent=g20.t1 NODE_2543_length_5952_cov_43.0219 . CDS 5318 5533 . + 0 ID=cds.g20.t1;Parent=g20.t1 NODE_2543_length_5952_cov_43.0219 . exon 5628 5952 . + . ID=g20.t1.exon2;Parent=g20.t1 NODE_2543_length_5952_cov_43.0219 . CDS 5628 5783 . + 0 ID=cds.g20.t1;Parent=g20.t1 NODE_2543_length_5952_cov_43.0219 . three_prime_UTR 5784 5952 . + . ID=g20.t1.utr3p1;Parent=g20.t1 #PROT g20.t1 g20 MAFTGRRFASYVGAGALAMSVFSLSDTRTKLYPHVVMPALRLLDPERAHRAAIVLASWGISPKDKTEDDPVLRTTVWGLPFRNPIGLAAGFDKHAEAIDAMVGIGFGFVEIGSVTPQVCAETM* # PASA_UPDATE: g12146.t1, single gene model update, valid-1, status:[pasa:asmbl_490,status:12], valid-1 NODE_1129_length_13738_cov_40.7739 . gene 1188 3759 . + . ID=g12146;Name=g12146.t1 NODE_1129_length_13738_cov_40.7739 . mRNA 1188 3759 . + . ID=g12146.t1;Parent=g12146;Name=g12146.t1 NODE_1129_length_13738_cov_40.7739 . exon 1188 3759 . + . ID=g12146.t1.exon1;Parent=g12146.t1 NODE_1129_length_13738_cov_40.7739 . CDS 1188 3719 . + 0 ID=cds.g12146.t1;Parent=g12146.t1 NODE_1129_length_13738_cov_40.7739 . three_prime_UTR 3720 3759 . + . ID=g12146.t1.utr3p1;Parent=g12146.t1 #PROT g12146.t1 g12146 MERTVDTVECSDGSSDFQRFCLLQKRRSYGSESGSRPTSASSLSQERNGSGNLHSSSSSLTKELPHTTQRSATSAKANGATASTSVTTTRGAANVSRVTSAKGGKRTAHGLPSSPSSTAAQPQPSNQHRVKCAPPKPSVITIPTAGGDRATSYDDINGWNDSVKTLADFCLVDSSCASARGEHHQDARRFEEEERRLTFQLASLGESNELQRRFHNHDCSSSNGCFHKHADGRHGRPGSTLSNSPHANAGTKGKPGKFESPARSPLPIDTPSPLVISSRVKSPSHATHSSRFDDTSLSDHQTHDDGQSPADRKRAAVATTTTASTTTTTHARAKSASPSTRKDKAVALEASDDFSRHSHGVSFSTRDGETNRVMFGNAFQATPLSASADSGHSGHSSKGGDEFDVTVSTATYLYMDRARRRRQQGKLSQFKLASPEQPAGKTVGSALGVSPSIGNVSDPLSPGGTTHKVRRRKKGKGKNRGDASNNRSPSPRRPPKRPITAPSLRPMPPESLLGVHGTRPPGGIVCDYDDRHSSSGSEADYATWQRDHRAADDSLSVSTVGIDAEDERDDCLDASVDLSRPGWAYTSFGTQRPSSAPAAFEHVKGPDLAAELLQHIKAQAKLAVSHQRNQSAEGGSRGSPTRAAWREDDGGASTMSPSSRPGTAASGHTAHAQDDATSDQSHLLSVPVSAQSSQSQASEVIASIRGGKYRDIKGLHKFLVGGSYTSPESLRVKLEETHRLLDRKDAPASRSASASASASRGGGGRPQSRMHSHSPPPFVGSISPNVGGPRSADQARHMRSPHHNHHTVHVHAHTPPHAHGGDVGHLLGGPVVVGLSPTGLRWR* # ORIGINAL: g12148.t1 original gene structure, not modified by PASA NODE_1129_length_13738_cov_40.7739 AUGUSTUS gene 4892 10782 . - . ID=g12148;Name=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS mRNA 4892 10782 . - . ID=g12148.t1;Parent=g12148;Name=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 8854 10782 . - . ID=g12148.t1.exon1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 8854 10782 . - 0 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 7909 8543 . - . ID=g12148.t1.exon2;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 7909 8543 . - 0 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 7444 7793 . - . ID=g12148.t1.exon3;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 7444 7793 . - 1 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 6935 7085 . - . ID=g12148.t1.exon4;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 6935 7085 . - 2 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 6404 6679 . - . ID=g12148.t1.exon5;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 6404 6679 . - 1 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 6030 6100 . - . ID=g12148.t1.exon6;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 6030 6100 . - 1 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 5538 5686 . - . ID=g12148.t1.exon7;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 5538 5686 . - 2 ID=cds.g12148.t1;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 4892 5239 . - . ID=g12148.t1.exon8;Parent=g12148.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 4892 5239 . - 0 ID=cds.g12148.t1;Parent=g12148.t1 #PROT g12148.t1 g12148 MDPAGKPSPLTVLFSEVDDTEGVTESTASKDKKDSPLVTWAVESIACDVAVATVAAERCWNAVKAIASREGRAQSSLNAEWSRVDEQRYAIALDYSRDKWSSARAAPHTNYGGGRSAGGVASAQSHVMHDASEEQDGVWRRAMERGGDNRERDRQKDRERDRKGEWQGSESHRESDRGTQVGSERHRPLGNFRDHRVLDEERGRRKRGREMDYDSDGSRDGRYDKHHREGMALRDYSVPGGDQSTFGVGDRNPMQVPLPASVLERVVATFERMSWSIDEHLRDELCRRACEGISTVVSSVLGGCRADEGAHAGASVDHLAATLDASVAMRYALRLLLLGISGGSPRGNFSGNTAPLQPPSNSADRFVTETIGDVDSRAWAHRLCSLCVAVTKQTLLPRECQQYIIARIVSCADVWTSGEGNPGTAAVAVVAALISSVVVTGGEDSVSVLCRSLTLAVENAFARTAVTNAFTAIARSVADGVTSLSGSCSYAPSQVSSLDSDASSYASALVACTIASFLRCPSLVADALLGVVRAYIGIIPGSFDESALGPNLALVCTDGAIEGLSLLLQTVFSVPLSTCILPTEFDIGLSDALVDGLSDNGRILIAGCAFAATCEAVRGHVGSVMSLIVAAALPFTRRECYGKQASHLHPSGALFADKILAIVVGMNGDVTQILSEIFLRKPSLHHVRVSAAGGSSILLGSSMTAAAMPPMQPSANFPPVFAASCNGDHAPLETMLSALLGFTGMTCNRVTAVSILKAMLERASRAYNEVDSGGHSTGMASFVRVSECIANQWHDARAQSVDAYVGEFVNVFGVDGPLVVEQDATGLSLAVDCIEGVAATIEWLVNREQAGADIGNAIPRLCDVTEIVWKHSPGLARVARVRLTSGSGTGTQCNFTARLAKSRVCVLRLLSIAAKHARGVSEGHLPGTCASHTTGVGTVIAVARVLSSCLSSAVESTAADDVVYLDAVESAFDALASYSASVAFPIVDALLDHVLPRSPTSGVVAEPISRSLRAGGTWSVLSGHIGTSVGSPSAVSISRIFRRLCLPPPITDRALQPSTLLPSVVTGDTAGTSRASRLALFVAEGLCARIMPNQPCPSQEQYAEILPKKSHYEWDSLIFRKFISNPSLWLITDIVSEDGDASVACIDLFRSLLVSLIGHWTSSRVELCAMSPMELGLSRTVVGWMRKSRWLPRVLCDVGDMLQLVTCKDAALLLMIVWTHLKEHPPTMGPLSEELSSRTCTPAGRARDRCPHLPMVRSILRANIARVGAAFFSYFPESADCAHCEDAANDPTEELENANGDA* # ORIGINAL: g12147.t1 original gene structure, not modified by PASA NODE_1129_length_13738_cov_40.7739 AUGUSTUS gene 4104 4743 . + . ID=g12147;Name=g12147.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS mRNA 4104 4743 . + . ID=g12147.t1;Parent=g12147;Name=g12147.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 4104 4376 . + . ID=g12147.t1.exon1;Parent=g12147.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 4104 4376 . + 0 ID=cds.g12147.t1;Parent=g12147.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS exon 4510 4743 . + . ID=g12147.t1.exon2;Parent=g12147.t1 NODE_1129_length_13738_cov_40.7739 AUGUSTUS CDS 4510 4743 . + 0 ID=cds.g12147.t1;Parent=g12147.t1 #PROT g12147.t1 g12147 MKMVVKEGESINVVCPAFVHRVRHPRSSACVGGACRWIVKLANIVLTPDNPEYAGGVWHVEGMRNERIVASGVYYYVSENISESRLHFGAAHRVAPFRLVDGTRPGVRKILIFFLVDPTERILSTLNVPPQQREWLVDSVCAAGGEMRRLPLELAYDIVSHLERPIVK* # ORIGINAL: g3977.t1 original gene structure, not modified by PASA NODE_7085_length_472_cov_80.3652 AUGUSTUS gene 2 472 . + . ID=g3977;Name=g3977.t1 NODE_7085_length_472_cov_80.3652 AUGUSTUS mRNA 2 472 . + . ID=g3977.t1;Parent=g3977;Name=g3977.t1 NODE_7085_length_472_cov_80.3652 AUGUSTUS exon 2 472 . + . ID=g3977.t1.exon1;Parent=g3977.t1 NODE_7085_length_472_cov_80.3652 AUGUSTUS CDS 2 472 . + 0 ID=cds.g3977.t1;Parent=g3977.t1 #PROT g3977.t1 g3977 SNVVNAVVDAFNTVLKNVRLNVLPVDGYVTATLPAPVNLGFGTKSTLNFQLVYDGTNPVSRRAVYTASPVGYESAQITVSTLPYYSQCNTTNAPNFFVLNCNGRGTNVCGRCVCNAPYSGPKCECDQSTTNCVSNGLTCSGHGKCNCNQCACEPDAF # PASA_UPDATE: g4324.t1, single gene model update, valid-1, status:[pasa:asmbl_2523,status:3], valid-1 NODE_1753_length_9386_cov_37.2174 . gene 4891 6248 . + . ID=g4324;Name=g4324.t1 NODE_1753_length_9386_cov_37.2174 . mRNA 4891 6248 . + . ID=g4324.t1;Parent=g4324;Name=g4324.t1 NODE_1753_length_9386_cov_37.2174 . five_prime_UTR 4891 5009 . + . ID=g4324.t1.utr5p1;Parent=g4324.t1 NODE_1753_length_9386_cov_37.2174 . exon 4891 5082 . + . ID=g4324.t1.exon1;Parent=g4324.t1 NODE_1753_length_9386_cov_37.2174 . CDS 5010 5082 . + 0 ID=cds.g4324.t1;Parent=g4324.t1 NODE_1753_length_9386_cov_37.2174 . exon 5244 6248 . + . ID=g4324.t1.exon2;Parent=g4324.t1 NODE_1753_length_9386_cov_37.2174 . CDS 5244 6103 . + 2 ID=cds.g4324.t1;Parent=g4324.t1 NODE_1753_length_9386_cov_37.2174 . three_prime_UTR 6104 6248 . + . ID=g4324.t1.utr3p1;Parent=g4324.t1 #PROT g4324.t1 g4324 MAAQEGWSASILRLVRSIHNFGSENSSRSSVARFIVADTHVGWCTQSVAAELSSYASAFRTEKNEADGTITKVFVNEALSTPEDRTAAVETVLLQLRERGIFQPLSGWRNEHYAVSTSFVAPRLMSIERAAAPLFGIRQYGVHINGYVVDASTGTVSMWIGRRSLTKQTFPGLLDNTVAGGIAAGMSVFDTLQKECEEEAKIPHSVSARARAAGTVSYFSENYLGLCPETEFAYDLQLPSDFVPVNTDGEVSDFYLWTMDRIRSELVGGSFKPNCALIIVDFMVRWGILSPDSEPLYCEIVAALHRDIYS* # PASA_UPDATE: g4323.t1, single gene model update, valid-1, status:[pasa:asmbl_2522,status:3], valid-1 NODE_1753_length_9386_cov_37.2174 . gene 181 4708 . - . ID=g4323;Name=g4323.t1 NODE_1753_length_9386_cov_37.2174 . mRNA 181 4708 . - . ID=g4323.t1;Parent=g4323;Name=g4323.t1 NODE_1753_length_9386_cov_37.2174 . five_prime_UTR 4620 4708 . - . ID=g4323.t1.utr5p1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 4530 4708 . - . ID=g4323.t1.exon1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 4530 4619 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 4167 4304 . - . ID=g4323.t1.exon2;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 4167 4304 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 3752 3834 . - . ID=g4323.t1.exon3;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 3752 3834 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 2882 3002 . - . ID=g4323.t1.exon4;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 2882 3002 . - 1 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 2466 2525 . - . ID=g4323.t1.exon5;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 2466 2525 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 1806 2132 . - . ID=g4323.t1.exon6;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 1806 2132 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 1488 1605 . - . ID=g4323.t1.exon7;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 1488 1605 . - 0 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 1255 1323 . - . ID=g4323.t1.exon8;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 1255 1323 . - 2 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . exon 181 948 . - . ID=g4323.t1.exon9;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . CDS 839 948 . - 2 ID=cds.g4323.t1;Parent=g4323.t1 NODE_1753_length_9386_cov_37.2174 . three_prime_UTR 181 838 . - . ID=g4323.t1.utr3p1;Parent=g4323.t1 #PROT g4323.t1 g4323 MDGRRAEIHSLYRRQYAAMVPLRSFNWGGQDDVAAILGEDEFQRILLTSTVACPLTLRYPPTREYSRQFLKTCMGRIEESGHAVADELYEAYADLLRPIHTDSGPEWCYKRYACSLDGRQCSEITLRESTQLLSRGTTGLSTWEASFCLSEFVLWKTSEFAHKTVVELGAGLGLAGIVAGLVAGADHVTLTDFDPTVLECLAFNVSLNVDCGVHGHSAYDTDLNPTSLNVDAVGTTGNPRSISDVASECNRPPPTVAERTLSRLCVKELDWFNFSETDAKAFSANVVIAADVVYDVALVPALVNTIALFIAQGAVVYIASTRRNEETFGAFIKCLGVNGIKGEIADTVLCPRVFFYNRQVPITLMRFAAGE* # ORIGINAL: g4325.t1 original gene structure, not modified by PASA NODE_1753_length_9386_cov_37.2174 AUGUSTUS gene 6643 8813 . + . ID=g4325;Name=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS mRNA 6643 8813 . + . ID=g4325.t1;Parent=g4325;Name=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 6643 6717 . + . ID=g4325.t1.exon1;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 6643 6717 . + 0 ID=cds.g4325.t1;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 7062 7253 . + . ID=g4325.t1.exon2;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 7062 7253 . + 0 ID=cds.g4325.t1;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 7693 7772 . + . ID=g4325.t1.exon3;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 7693 7772 . + 0 ID=cds.g4325.t1;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 8205 8298 . + . ID=g4325.t1.exon4;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 8205 8298 . + 1 ID=cds.g4325.t1;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 8646 8813 . + . ID=g4325.t1.exon5;Parent=g4325.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 8646 8813 . + 0 ID=cds.g4325.t1;Parent=g4325.t1 #PROT g4325.t1 g4325 MLSATLIGGLRGLCARAGSLARTQQAALSVRNTSSAASSSSAGSSSSSQNDDDASVDDLGELIENETLKALVKQPYTPELGAKIARELGLTQFGSMKAVYTAATGNTNPTDEEVISFDGAKFREIVKYVFPKVQENKINITMERFNTKLGDDGRPVSPAFFTGKAFYYGKLEELEKQLSALCQKYPNPKVAVNALQETVEEA* # ORIGINAL: g4322.t1 original gene structure, not modified by PASA NODE_1753_length_9386_cov_37.2174 AUGUSTUS gene 139 328 . + . ID=g4322;Name=g4322.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS mRNA 139 328 . + . ID=g4322.t1;Parent=g4322;Name=g4322.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS exon 139 328 . + . ID=g4322.t1.exon1;Parent=g4322.t1 NODE_1753_length_9386_cov_37.2174 AUGUSTUS CDS 139 328 . + 1 ID=cds.g4322.t1;Parent=g4322.t1 #PROT g4322.t1 g4322 GIGLELDFMRFIPKLRNKGGRIVLLYVLTQGMDLLLTGVVAYLAFGKYGDSDADSQDLAIKH* # ORIGINAL: g2412.t1 original gene structure, not modified by PASA NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS gene 5753 6514 . - . ID=g2412;Name=g2412.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS mRNA 5753 6514 . - . ID=g2412.t1;Parent=g2412;Name=g2412.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS exon 5753 6514 . - . ID=g2412.t1.exon1;Parent=g2412.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS CDS 5753 6514 . - 0 ID=cds.g2412.t1;Parent=g2412.t1 #PROT g2412.t1 g2412 MAFSAGETMSYFKEIERKFPHRISSAKMNSVLHNFDSVKNVTFPNKYAACAINVVDADTFVTAKQMLDKGLKPLVLNMASELRPGGGWRKGSIAQEEALFYRSTYSMLLEPRKMCYPLKADEFIYSRDVFVFMDEQQVAMDWPDCYWVDCIAMPGIRNPPVTTNGRLSAAHERLLEQKIRAICATAVKHNNNSLVLGALGCGAFHNPPEHVAQIFKRATDDVRKSFRQITFAVLGVGNAGLQNLRAFRNEFGQ* # ORIGINAL: g2411.t1 original gene structure, not modified by PASA NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS gene 2087 3067 . - . ID=g2411;Name=g2411.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS mRNA 2087 3067 . - . ID=g2411.t1;Parent=g2411;Name=g2411.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS exon 2087 3067 . - . ID=g2411.t1.exon1;Parent=g2411.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS CDS 2087 3067 . - 0 ID=cds.g2411.t1;Parent=g2411.t1 #PROT g2411.t1 g2411 MAGQCFTGCALPASGIRTLPYFPSTLKTRSVVACDVHFGDETAWESYLRDTYGAVRIPWKVPDNTVLTLPDVQMRPVMELQEWIDDSCMVVGSAYDCVGVSPMNHFMNLNKIQMPAVDEFLAPIQCRKRNVDVLGSLLEGEKLWVSGSPGMEILDKETQSFVNPIARFAYGQSGSNAIAILGTIHASLTKDIASSKGKLYTMRVEGAAGQKQLLKSMTFIEKRRHEELKKDLNTLKYGIGQLIKTYNVEQKHEYVSALQHLISSGEAVGEGGLAPQDSSAVEEVVCAPQNSSAAEEVLCVPQDASTAEEVLCVPQDSSADEVVRVC* # ORIGINAL: g2410.t1 original gene structure, not modified by PASA NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS gene 2 808 . + . ID=g2410;Name=g2410.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS mRNA 2 808 . + . ID=g2410.t1;Parent=g2410;Name=g2410.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS exon 2 808 . + . ID=g2410.t1.exon1;Parent=g2410.t1 NODE_2244_length_7095_cov_24.1997_potentialcontaminant AUGUSTUS CDS 2 808 . + 0 ID=cds.g2410.t1;Parent=g2410.t1 #PROT g2410.t1 g2410 IQQRVGCYAIDSYIGKSENKSVYTLDHILHQLHMVPLVESLQVPGLKVAINVTAAANGEKLRRVTTSDMSFLSDDNQPIENPYSREHPIEILQLKRGTNLSLMVDTKFGIPNYYGQVATAQQAANLPPGERQRGNGKYSCVASCVGVKSVDGHVLKFTALGQKSAIEIMKEASALVVESLTTLAEQIDNSRLIISLGELERQQGGLATGYLVQHMTMTMFPTTCVLIDNNADQIEFVGLTDVQLKELRDALVTLAREITLSVSPLATS* # ORIGINAL: g12849.t1 original gene structure, not modified by PASA NODE_2256_length_7048_cov_49.9195 AUGUSTUS gene 869 2540 . - . ID=g12849;Name=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS mRNA 869 2540 . - . ID=g12849.t1;Parent=g12849;Name=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 2482 2540 . - . ID=g12849.t1.exon1;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 2482 2540 . - 0 ID=cds.g12849.t1;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 1895 2257 . - . ID=g12849.t1.exon2;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 1895 2257 . - 1 ID=cds.g12849.t1;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 1422 1679 . - . ID=g12849.t1.exon3;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 1422 1679 . - 1 ID=cds.g12849.t1;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 1235 1290 . - . ID=g12849.t1.exon4;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 1235 1290 . - 1 ID=cds.g12849.t1;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 869 1017 . - . ID=g12849.t1.exon5;Parent=g12849.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 869 1017 . - 2 ID=cds.g12849.t1;Parent=g12849.t1 #PROT g12849.t1 g12849 MQYESNESGDGFVQREILPRWQRLSRRAHFDSNSKTPHVTPLHKIATAIAEHRRNLTTSDSDSVGHSSRSPTYVVLVSTGSYNPVHRMHVGMFDAARAHIERVYSGSPGGVVVGGFLSPSHHEWVAAKFGDDGPVASTEDRIAMCEAAVALSPLLSVSTWECTRPFAEYASFADVVDHVWVSLRGAFPSESFAVFYVCGADHALNCRLHDQSVLDVVCVGRPGFTDSIGNNNNINNINNSTLWRCGAGDDVSSTIVRHLLRTGSGGVHVLTGETVAAFAAKVAPYGCPPAASPT* # ORIGINAL: g12850.t1 original gene structure, not modified by PASA NODE_2256_length_7048_cov_49.9195 AUGUSTUS gene 4457 7048 . + . ID=g12850;Name=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS mRNA 4457 7048 . + . ID=g12850.t1;Parent=g12850;Name=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 4457 4600 . + . ID=g12850.t1.exon1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 4457 4600 . + 0 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 4838 4970 . + . ID=g12850.t1.exon2;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 4838 4970 . + 0 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 5259 5391 . + . ID=g12850.t1.exon3;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 5259 5391 . + 2 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 5564 5586 . + . ID=g12850.t1.exon4;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 5564 5586 . + 1 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 5851 5991 . + . ID=g12850.t1.exon5;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 5851 5991 . + 2 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 6317 6489 . + . ID=g12850.t1.exon6;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 6317 6489 . + 2 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 6669 6764 . + . ID=g12850.t1.exon7;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 6669 6764 . + 0 ID=cds.g12850.t1;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 6937 7048 . + . ID=g12850.t1.exon8;Parent=g12850.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 6937 7048 . + 0 ID=cds.g12850.t1;Parent=g12850.t1 #PROT g12850.t1 g12850 MLSPGVHTLLCTHAPVYAFSFPTESSVSFERQWALVGERTVENAARASELDNVLYDANIAAGQQAYLITAFYKAIAELPAVQKQLETVCASMEMVNARLSSLESLMEQLECGCEDVDLERAKAAKMRDVEQHKAKHERSLVDYRAKCEAEKRRLDDDRVRRELATLAERQRVYEEQFKEDLDRYKKTGQRDGPIGVSAPSEVPTKSISTMSPSPSSRHPKVRGLGEIRIDDLLGSSLDSFYSSDGSSNKGRQRHNSRSSASALDVVSSGSEDSERERRRKKEKKHKKERKEKKERKEKKEKKERKPSPLSEQDAGEDN # ORIGINAL: g12848.t1 original gene structure, not modified by PASA NODE_2256_length_7048_cov_49.9195 AUGUSTUS gene 74 719 . + . ID=g12848;Name=g12848.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS mRNA 74 719 . + . ID=g12848.t1;Parent=g12848;Name=g12848.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS exon 74 719 . + . ID=g12848.t1.exon1;Parent=g12848.t1 NODE_2256_length_7048_cov_49.9195 AUGUSTUS CDS 74 719 . + 1 ID=cds.g12848.t1;Parent=g12848.t1 #PROT g12848.t1 g12848 CLIGLGDPLLGPSAVEAISMGSVYINPLYDDSDVRAGESEGHRQQERYPGDKDGLTVGNNRTSIPKGPPRGGNDTTVWRSVVINGLRHSSQHPHLEQLAREDPNVARLVCNYRMEEPSTLAACLSRAVDGACDNGVPRRADEDSGGVGRRVGGWIGKAVGAFLIRDDGTAKSGKKGAGCEDPRAYVPREYRRSAFVERFLRIARNAASSEKDEA* # ORIGINAL: g14019.t1 original gene structure, not modified by PASA NODE_2530_length_5991_cov_36.7571 AUGUSTUS gene 5024 5428 . + . ID=g14019;Name=g14019.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS mRNA 5024 5428 . + . ID=g14019.t1;Parent=g14019;Name=g14019.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 5024 5428 . + . ID=g14019.t1.exon1;Parent=g14019.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 5024 5428 . + 0 ID=cds.g14019.t1;Parent=g14019.t1 #PROT g14019.t1 g14019 MPPLWSSVASIGRRRLSQSAMTPRLATPDPFNHGIGRCAHVQPLHVPHSRHAATMAQDAISHDMHRTPSVPTANGVTVPLRLVYARDAVDAESALSAAIPVFGVAHPLAVGLDIEVCLYLCGYEAMWVYVCDWN* # PASA_UPDATE: g14018.t1, single gene model update, valid-1, status:[pasa:asmbl_4513,status:3], valid-1 NODE_2530_length_5991_cov_36.7571 . gene 3407 4630 . - . ID=g14018;Name=g14018.t1 NODE_2530_length_5991_cov_36.7571 . mRNA 3407 4630 . - . ID=g14018.t1;Parent=g14018;Name=g14018.t1 NODE_2530_length_5991_cov_36.7571 . five_prime_UTR 4530 4630 . - . ID=g14018.t1.utr5p1;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . exon 4344 4630 . - . ID=g14018.t1.exon1;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . CDS 4344 4529 . - 0 ID=cds.g14018.t1;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . exon 4060 4159 . - . ID=g14018.t1.exon2;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . CDS 4060 4159 . - 0 ID=cds.g14018.t1;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . exon 3407 3792 . - . ID=g14018.t1.exon3;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . CDS 3566 3792 . - 2 ID=cds.g14018.t1;Parent=g14018.t1 NODE_2530_length_5991_cov_36.7571 . three_prime_UTR 3407 3565 . - . ID=g14018.t1.utr3p1;Parent=g14018.t1 #PROT g14018.t1 g14018 MMQDEHNGDRVDLHGARDDNRHPLGAIPPAPAQVNEQFVIMEFEDNDVTKDYLNSCQSYEISGLDTPHPLMRLGADYYKGRYEDIIGSEIVVSRKDAPVAHPAELQPHVFAQRPQPNSHNTHNTTNAQQHKPAYAYTCHTSKRLIFSWVRPVAFVVGDSQSNDSTPMDVS* # ORIGINAL: g14017.t1 original gene structure, not modified by PASA NODE_2530_length_5991_cov_36.7571 AUGUSTUS gene 283 2795 . + . ID=g14017;Name=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS mRNA 283 2795 . + . ID=g14017.t1;Parent=g14017;Name=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 283 483 . + . ID=g14017.t1.exon1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 283 483 . + 0 ID=cds.g14017.t1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 812 913 . + . ID=g14017.t1.exon2;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 812 913 . + 0 ID=cds.g14017.t1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 1202 1373 . + . ID=g14017.t1.exon3;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 1202 1373 . + 0 ID=cds.g14017.t1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 1608 1792 . + . ID=g14017.t1.exon4;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 1608 1792 . + 2 ID=cds.g14017.t1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 2131 2251 . + . ID=g14017.t1.exon5;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 2131 2251 . + 0 ID=cds.g14017.t1;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS exon 2452 2795 . + . ID=g14017.t1.exon6;Parent=g14017.t1 NODE_2530_length_5991_cov_36.7571 AUGUSTUS CDS 2452 2795 . + 2 ID=cds.g14017.t1;Parent=g14017.t1 #PROT g14017.t1 g14017 MTPLQVTCYQFKDANNWWAVVAPDGTLSNAGRSGPVYSGDTVKLIHVARGCALNSHNVAAPIDPTQQEVTCHGGSETLPAEDLWRVEVSDNLAISLLKKPWRTLGATFQLIHEKTGATMRTTNKPLPEWGFKQLEVVSTRNLEWGLGVWRVEEAKDDKAPAMNNTRPVDAMSFVDKMVELHSAMFDANSRLTSEHAYASRPYSWPLLRRGLSFYQKDGAQIYLLGNPIIWWICAATIALYGMLDVVFLLRRQRGFKDMNDAIYSRFTRGRILFFGWLLHYIPFFPMQRQLFLHHYLPAQLFASMLAPVAMYELASILKLTSNPRHVWAVAAMLSVAVAGAFVVFAPLTYASSLTPDEAQALKWKATWDIMIPKK* # ORIGINAL: g11640.t1 original gene structure, not modified by PASA NODE_2604_length_5710_cov_35.1185 AUGUSTUS gene 199 3796 . - . ID=g11640;Name=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS mRNA 199 3796 . - . ID=g11640.t1;Parent=g11640;Name=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 3707 3796 . - . ID=g11640.t1.exon1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 3707 3796 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 3220 3337 . - . ID=g11640.t1.exon2;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 3220 3337 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 2663 2781 . - . ID=g11640.t1.exon3;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 2663 2781 . - 2 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 2202 2273 . - . ID=g11640.t1.exon4;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 2202 2273 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 1711 1800 . - . ID=g11640.t1.exon5;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 1711 1800 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 1259 1322 . - . ID=g11640.t1.exon6;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 1259 1322 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 888 967 . - . ID=g11640.t1.exon7;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 888 967 . - 2 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 668 740 . - . ID=g11640.t1.exon8;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 668 740 . - 0 ID=cds.g11640.t1;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 199 482 . - . ID=g11640.t1.exon9;Parent=g11640.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 199 482 . - 2 ID=cds.g11640.t1;Parent=g11640.t1 #PROT g11640.t1 g11640 MEEIEPEDVPPVAPIVHIMLVGFHHQYGPQIEYAYPPIASAASAEIDPKNRDRLIPPPEWKLIPFLALPDGAHNSDEDFTYFNVPALETGHEAGRTHFAVSCYRKMLSSQLKTVTSDVTRSHVQKAVVVLSRLPLYGLIRTKLAVITRSLFEQCDFTNLEILRDFFHTLTNQLSQRMDESHLYIGLSTQDLVRRFHHRTLTLFKLLLLEKKVVFYSAHSVHGLCSFLVSLASLLPGSLEKGLHHAANTLTSAETSNSLVDIDGSGAMDDGSDPSARDASSGAVGGDARARLGSSSAMSNAPRVARGKTQSAELRRERARRFSLPLPLFGK # ORIGINAL: g11641.t1 original gene structure, not modified by PASA NODE_2604_length_5710_cov_35.1185 AUGUSTUS gene 4658 5443 . - . ID=g11641;Name=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS mRNA 4658 5443 . - . ID=g11641.t1;Parent=g11641;Name=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 5431 5443 . - . ID=g11641.t1.exon1;Parent=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 5431 5443 . - 0 ID=cds.g11641.t1;Parent=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 5127 5239 . - . ID=g11641.t1.exon2;Parent=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 5127 5239 . - 2 ID=cds.g11641.t1;Parent=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS exon 4658 4792 . - . ID=g11641.t1.exon3;Parent=g11641.t1 NODE_2604_length_5710_cov_35.1185 AUGUSTUS CDS 4658 4792 . - 0 ID=cds.g11641.t1;Parent=g11641.t1 #PROT g11641.t1 g11641 MDFTSFLIGHVTPEAAVGGAIGLLKDGDIVAIDAEKRTMDVKLSEDELSRRRAAYKAPPPKARAGALLRYVKTVSSASTGCVTDAL* # ORIGINAL: g8521.t1 original gene structure, not modified by PASA NODE_261_length_28798_cov_44.207 AUGUSTUS gene 21784 27719 . - . ID=g8521;Name=g8521.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS mRNA 21784 27719 . - . ID=g8521.t1;Parent=g8521;Name=g8521.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 27649 27719 . - . ID=g8521.t1.exon1;Parent=g8521.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 27649 27719 . - 0 ID=cds.g8521.t1;Parent=g8521.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 21784 27514 . - . ID=g8521.t1.exon2;Parent=g8521.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 21784 27514 . - 1 ID=cds.g8521.t1;Parent=g8521.t1 #PROT g8521.t1 g8521 MEGFFRPGKDGRPPIPDQRQVIKEKYKGLFDTTRTPSTVGCSRVRTWKDDRPKVMAPAAVSLQPILLQHTSMLTTQKTVTFLNTDSPGRPEAPIMSPAPVETTPVTSGVVSSGVEQMGNGTIPDGALVPYDSPATPRSAGVASPVQSGPSRSSLTATPNSAMEASVHSRAMEILAQLQTGSVPGEDLLPPPTLPGNRPKGRTYGGQRSTAVPTVAVTTGHIRVRTSPGDGLLMHAPPLVSKQMAAPPAPSTATAFANGRPQSGVRSANAKHTAARDKQGDVHPVGVDPTDGAAVSGEAAALAPTERHVAQPVLDEPIPPKPAPFQPCDPLRSADLSENWLHVEPASIGDAPPAQRPRSQAKTSRRRHKKRRKPRVDSHSAARSSVYRWTYRPNVHAFCNMDMEHGSHSPEEAHDTLHTLLYPNYSPSRLTGVPVPDAMGENLRLPSANIREAMDAIERAREAQSILAELRAQQEEEADALAIAAAAEAASAADNAAADEPLAGKASVPDGAPTVAAVATQSTAAESSTGTNGHSNGDNDKSNPPVPAAPADGSMASQSFSRPRLVRRSSSLPSLPALNFIGDDPAGAPSGSSPPTQPTVQESPLVPAEGAAAPTGAAGLDAQSPLSDSHRRSSLATSALVNALHPARSIGLGGDRVRRLSWQGVDTPRSSRPSSPRASIHTSDQARTIAVALSLSGPMPLAIGTRRWIHNLAKPQLRFLGLKKAKSWEDLTRYKPLNAPKFYATRLDDRAAVHLERRGVRYYSTLSLAMFPAILPENPPRNMTAYAKNGFIRETVSKMWGNWRHERDVETIRNLVGDINGSASPTLNHSSNASSEMVLVNNRRTTAPEQQQQRKRRYTQSRQRHVIVGMRATPSVIPSVAESGGRDAPAPGSSHPPRHSSVIGGVIQSLTAGNILSEGDMRAMEEASIREKIDAIGNLLDVDRRAAAFNYCRRGALRLKVGDVGPAMSDFDKATDLEPALIDAYWHRHRLHLSRGDSDEALDDLTLAISQNSRSTRVHLARADLLRRRGQVREAIVGLSQALRVLPRDPAIHFLRGIMFDEEGEEQCAAEDYATVMVLDPSNVDAAIRHGLKAFNAERWEEAISNFGHALKNDPKAWKALTYRGMSLAHKGRFELALEDLTHAIHLEPMSPVAYCFRGCVLRKRDPKKAIRDFSSSLLVDDGPDNKIAYFHRGILYASIRRFDESLADFQSVIKLDKGNVGAHINKGVLLLTQYDEPRLAALSFTAALKTDPTSIRALLCRADAYVRLNDTQMAIRDYTRLIFANPTHHSYRLHRGRLLLEQKQLELSLYDVRCASVINAALGQTASQRGVVNLFLRNYAAAIRDFEELVIADPSPQLYVLLARTRMKNGQHAEAIGDLRSAIGMDPRMFDAYFSLGQCLETIGEFEDAIVEYQRALALRPGSAEALHRRGLCRLHMNNGRGVADLNKTIKCDPTNFDAYLTRACYYERRGQPGRGIIDCNEALKMQPASVRVFIIRGSLRARMGQFRMAVDDFGRALSIDPNCTLAYFNRGVCEQDVGHYSEALRDYSTVLLTDDSNTNVLRNRGILYCIIGDHANAAADLLNVMSRDPFDATLHAVIGLCHHRLGKHRRAILDYNEAVRINPFLLEAYIGRGNVRMDLGTPEELVRCRRDYIRAIHLDPSHLPAYVNLGYVLQAQGKHKLAWLQFSSAVSVNSHCKDALEGRAVVNAIMGNKFGALLDMNRAVDVHATPELLNNRGVVHERAGDNVSAMRDYAEAIAVDPGYSLAQYNAGNMYIRTRQWDQAVTCLDKAVEADPSDEGALMNRAIARYASGDIDGAVADLDTAEKLCPDVAAIYFNRAAVHTVARRFEQAESDYDKALRLVPADPTAYEKRGYVRGKLSRRQDAMADFARSVDLQYAPVAPAVDSDAGRFRVGGLATGNAPAWQPLKPEAV* # PASA_UPDATE: g8517.t1, single gene model update, valid-1, status:[pasa:asmbl_4664,status:12], valid-1 NODE_261_length_28798_cov_44.207 . gene 2088 5161 . - . ID=g8517;Name=g8517.t1 NODE_261_length_28798_cov_44.207 . mRNA 2088 5161 . - . ID=g8517.t1;Parent=g8517;Name=g8517.t1 NODE_261_length_28798_cov_44.207 . exon 2088 5161 . - . ID=g8517.t1.exon1;Parent=g8517.t1 NODE_261_length_28798_cov_44.207 . CDS 2267 5161 . - 0 ID=cds.g8517.t1;Parent=g8517.t1 NODE_261_length_28798_cov_44.207 . three_prime_UTR 2088 2266 . - . ID=g8517.t1.utr3p1;Parent=g8517.t1 #PROT g8517.t1 g8517 MAPPFSRRTLALVGYTVCVLYVVSVLRGAVVQPTGARDEEDAEPTFNIPLGTTTDGTALSQWAGRMRQRAVALGASFGLRAAGENGVAAQLWEDGAEIQDEVGGALDSTDFEDVPNEHEVARDSIDLDALDMRYNPLHPQSDGDNSNSSGNAGSDGGAQDSVNGDRGRSDGMGAPEDAGNSKGGARIKALTKRDKFLIAHTCQWTLLDQMSAIAAAVRIAKATGRHLLEPWVCHGSTTRRSVIYAQPASTYFDMAPAREFLDPFYDAPEDGVIVDRFAPVFARAAAGHALPLVRPPEASAPAGADTANGAQGISGQTALQRDAADRKLRMVTMDDLVSYGLRLPQSVSCIEFPNRHGIRLYSLERPVRAECAFAVDVNTTDIEALAMLFPNAQPIAVRHSYPWPPPPAPADRDKAAAVREHANGKDDDGRPNVPNEPLDLLDSDEADEAIKRLALRMPPTTTRAASVHPSPTQQTQPQQERRLTRSQLLRLSRFIGTQRWVGTGSLVDAEVPFVFRRVQSGQPGLSPHDDGRVHIDQDVLTFTPFQLVPSDPIAAYARKLLQRVLGGKFAYVAAHVAVGDAFQRYCDAVVGGALERASSNATESNVLQARPVTCGANTTYVASSLVASARLLAREQALLSLRATVTVTSPAMDGGDSSAPILAAGGGAGTTQRGTGAPLRPVVVLLATSDGDARELAQLQHSILSAAAHSATGQPHAAPLQPTQEPSNTAARNSSAAPPVAVIDEGGGPRSLRVIMGVHGLIEYMVDAAFAGLDDSATSHGGAGGQVVSGADGGGGTGRAPVNRTALELANKMIAEIYDGIQLNDKTMVALVERLLLACARRLHATRMSSHSQHAIQLRAYAARHVCPDGDINPETNSDALDEYEEAAAAAQSRLASVEWLRPHRSTRPMHDEAAWRTEEARWAAELAVLTAADEGEEAHRHARRRRRKHKRDNQDRREYDGDA* # ORIGINAL: g8520.t1 original gene structure, not modified by PASA NODE_261_length_28798_cov_44.207 AUGUSTUS gene 18733 21076 . - . ID=g8520;Name=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS mRNA 18733 21076 . - . ID=g8520.t1;Parent=g8520;Name=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 21027 21076 . - . ID=g8520.t1.exon1;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 21027 21076 . - 0 ID=cds.g8520.t1;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 20266 20861 . - . ID=g8520.t1.exon2;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 20266 20861 . - 1 ID=cds.g8520.t1;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 19399 20132 . - . ID=g8520.t1.exon3;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 19399 20132 . - 2 ID=cds.g8520.t1;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 18733 19308 . - . ID=g8520.t1.exon4;Parent=g8520.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 18733 19308 . - 0 ID=cds.g8520.t1;Parent=g8520.t1 #PROT g8520.t1 g8520 MFLGPTKLCFHHSVLTLGGARPRRQGRAIHAHGHRTPPRVVQASLRLLRRIRDTVVNDNVVGDLSQYRPHGHWDIDLAAHNGHLEVIMLLHEDEVKRGRATHCSNKSIKVALNRHDWGMFEFLVRHRPEVFPDDRGDFYGLSGGFKNALRAQLLFLLEEAPSFLTHLAASHAARSAVQLGDATLVWRLLPLMQRPADIADIALLCSMRATASQHVVSVVEKTDLIDKAVQEGYMSVALRLREMGAKCEEAFGSRDEITRFINEDGAKVGLWTLVTCLRRGDYDAAEFVVPRLNEWELTCAAQFLLRYGAMDGLRWMKEKQLLGSRCMKLLDGSSLWDSMHIPSDLVDKVPKFVPTCEAVEFVITLMREEKIFQKTLVHEDPWEVRVAKAWYAPAIARGDLTVLRYLCESVGILRVFSHRGACAAQGANAAVAAGHTDMVVYMMDVNARRVPVRNGALHPKPAVGTERVAVICCALTTVAAVSVGDYRSPSALSPDKVRTEFLSAVSGCRLEFVRWFEERHPDIVASCVPDIKFALVKVRDMSIFRAILERHTAFCYQDLSQQYKMPVAVSYDTFVVEQLLGVELMRRPLRISDWAEAGRVDVLQAAIDFHVPLYRQYTTMFDPTSPHVLRNPPLVQWFRNNDAAGKFNFTS* # PASA_UPDATE: g8519.t1, single gene model update, valid-1, status:[pasa:asmbl_4668,status:3], valid-1 NODE_261_length_28798_cov_44.207 . gene 13853 17412 . - . ID=g8519;Name=g8519.t1 NODE_261_length_28798_cov_44.207 . mRNA 13853 17412 . - . ID=g8519.t1;Parent=g8519;Name=g8519.t1 NODE_261_length_28798_cov_44.207 . five_prime_UTR 17251 17412 . - . ID=g8519.t1.utr5p1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 16963 17412 . - . ID=g8519.t1.exon1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 16963 17250 . - 0 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 16327 16414 . - . ID=g8519.t1.exon2;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 16327 16414 . - 0 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 15990 16084 . - . ID=g8519.t1.exon3;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 15990 16084 . - 2 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 15584 15671 . - . ID=g8519.t1.exon4;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 15584 15671 . - 0 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 15315 15446 . - . ID=g8519.t1.exon5;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 15315 15446 . - 2 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 14355 14662 . - . ID=g8519.t1.exon6;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 14355 14662 . - 2 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . exon 13853 14184 . - . ID=g8519.t1.exon7;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . CDS 14005 14184 . - 0 ID=cds.g8519.t1;Parent=g8519.t1 NODE_261_length_28798_cov_44.207 . three_prime_UTR 13853 14004 . - . ID=g8519.t1.utr3p1;Parent=g8519.t1 #PROT g8519.t1 g8519 MGSTATPAEVESLERILSEHLPAEQHAHVTRLLYGKSLPPLDIPESVAAIAQRNDFEIKGYAFAAAREHVRAPRIVRIGLVQNSIALPTTAPVLDQIDAIHKKVGNIVDAAAGMGVNVICFQEAWTMPFAFCTREKEPWTQFAEPAETGRTTKFCQEMARKHNMVIVSPILERDELGGADVIWNTAVVVSNTGAYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFQTQFGRIGVNICYGRHHPLNWLMFGMNGAEIVFNPSATVGALSEPLWPIEARCAAVANGYFAAAINRVGTEHFPNAFTSGDKKPAHNEFGHFYGSSYVTAPDGSRTPGLSRTRDGLLVTELDLNLNRQVRDMWGFQMTMRRDLYAESLTRAASPDFKPQIIYEKRD* # PASA_UPDATE: g8516.t1, single gene model update, valid-1, status:[pasa:asmbl_4667,status:12], valid-1 NODE_261_length_28798_cov_44.207 . gene 42 1964 . + . ID=g8516;Name=g8516.t1 NODE_261_length_28798_cov_44.207 . mRNA 42 1964 . + . ID=g8516.t1;Parent=g8516;Name=g8516.t1 NODE_261_length_28798_cov_44.207 . five_prime_UTR 42 42 . + . ID=g8516.t1.utr5p1;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . exon 42 216 . + . ID=g8516.t1.exon1;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . CDS 43 216 . + 0 ID=cds.g8516.t1;Parent=g8516.t1;5_prime_partial=true NODE_261_length_28798_cov_44.207 . exon 594 778 . + . ID=g8516.t1.exon2;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . CDS 594 778 . + 0 ID=cds.g8516.t1;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . exon 1138 1243 . + . ID=g8516.t1.exon3;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . CDS 1138 1243 . + 1 ID=cds.g8516.t1;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . exon 1544 1964 . + . ID=g8516.t1.exon4;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . CDS 1544 1687 . + 0 ID=cds.g8516.t1;Parent=g8516.t1 NODE_261_length_28798_cov_44.207 . three_prime_UTR 1688 1964 . + . ID=g8516.t1.utr3p1;Parent=g8516.t1 #PROT g8516.t1 g8516 VCGNALVNSVYEGMAGADDPNRAHEHSERAPREKWIRSKYSEFKYVPPTTADAATLIKQLHDAVEKNDIHGIVLAIAQGADVNGAEGGTRPLHRAAHNNHIEAFELLLQRGADPRARDKRERTPLHVAAALGRTQHVCLLLKRSMDIAEKDNTGKDALALALEETHADVVTLLRMCQMQLDSNEGQSAFQQIITEYYKGMDG* # ORIGINAL: g8518.t1 original gene structure, not modified by PASA NODE_261_length_28798_cov_44.207 AUGUSTUS gene 7809 13567 . + . ID=g8518;Name=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS mRNA 7809 13567 . + . ID=g8518.t1;Parent=g8518;Name=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 7809 7871 . + . ID=g8518.t1.exon1;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 7809 7871 . + 0 ID=cds.g8518.t1;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 8270 8309 . + . ID=g8518.t1.exon2;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 8270 8309 . + 0 ID=cds.g8518.t1;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 8860 12332 . + . ID=g8518.t1.exon3;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 8860 12332 . + 2 ID=cds.g8518.t1;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS exon 12551 13567 . + . ID=g8518.t1.exon4;Parent=g8518.t1 NODE_261_length_28798_cov_44.207 AUGUSTUS CDS 12551 13567 . + 0 ID=cds.g8518.t1;Parent=g8518.t1 #PROT g8518.t1 g8518 MEGRFKHRRFEEAAFSVLYCMVKDSELGSTLGFILLVIEDVQLLTFSWSRAFGFTPLPEIFTFEYPEHSNYAVFRALFWIFFSVVAVIISTVVYIGVCYRRGSFKAVWPVRLLRYLSTATSTLALMPMLTVFFQGIICTQNEDGDVVVKKFQEVGCFSSQHLPIFILSIVALAFMLAYAVVMSLICFEPDPRSNVPAARPHGRTDTAYVIVRVILIVTYEALGHSYSANAGKLAVALIAMVFLCGMVVIYQPFYAPHMTDIRAGIFFASAGDVIVAIGTLSSKGGSGVAAFSVLCVLTPVFFVGGYFASRYIRGRIVMGIYSRLAVAPPVRLHSRQMSGFNVRDMAAYAASGDVPELKNRWTLGNIKRVAMKEVKPTPKVFHRVTDVEIAARFLRRNRDAEAIRLAHDLFAAALQEFPKSPLLRIVHARYIAGYSGQAGAAQKQLEAAVAMRPGFDIRCLLFMEWRTLQQDKQTEGLGIDSSLSITSYIQFQMTQAGARRHHIEALRLSCQFWKAASSTSTVDHDIVFHNLHELWVSRRKAQYMYESLLSDYPKSKTNLRLYSHFLTFVCNNVEDAQEFALAADVIEDEETRMSVARSKILQRKGHRGSSEANGQPHVDGCDEGVQHHHLSQEMSLGVDSDKVGGMRMASYDRFQSESSRDCTGPRAADNFSRTAGAIDTLDGPGDCYDGQHMHVTDKEGNGHQGREGAAVVRDADEVEERGSTSGSCAVSLAEVEIAGMPNALVGGDEDDLYRAAMHGLGKRRGNGGKGSGDSSNAAGALSVNFEMHEFGNGYSEMPMLERVTLKGSYNDSRESILKRTMPANSDTHMVSVNYTSCVPEPQDRLPDLRLASAVDIGVLEDNNKAASRAESTRLGRPVPVFQGVPAQSNADNNNHNNHNNHNNNNNDEQPMRRARSTVSFASTSSREQGTQRLRRQRIESRLKKPAVRERNKGIFLWIALVGLIVAGYVLSLNAFDEQRSRLDGLKTGTRPRRIVSGFFLNARELMRHIGNKNQANYDKVCASMINDVERFETTGMQDYMIRTNTFKPRVRVLTQVQPDMPKRAAYMTSLDAMQTLLRNVRIVAATPFSVANATNMLATSELRFVLDNGLAINVAVDDEMHDRELEFDSASNTTDERNYIIMGVFLFCDVAVILFVFWPLMREISTRRARMTAVLKLVPRAQVNDMIGVLDEELQHLVALVPEEGQRDGLAQIDDTESAEALAQRQQQAALLGESSIGIHTNSTFDAVVTERSAIRKAKLKLWLRFLLCVLLAAGFAVGMFSVTFSQSKYSSGLARLMNLSNARRYRAEGISALCNELVANDLTTWTPLGARTVLDEWIAMLEQMHNDCLYGTSKTPSTFELHGLYNELVKGNVCHVDAGCDARTYTPSIGLTRDLVLLPLNRLIAHFLGLAKAYSAISGPYAFSDPPRTILSALTADIKDGLNRTDFIIINTVTDSIDNSNTVLTLLFALTLGALVVLFFWCIVATTRRFEREMVQSVRLFFDIPLPVLLSVPQLRRFIESGGNVEKKD* # ORIGINAL: g10044.t1 original gene structure, not modified by PASA # ORIGINAL: g10044.t2 original gene structure, not modified by PASA NODE_118_length_38166_cov_42.2487 AUGUSTUS gene 21371 24841 . - . ID=g10044;Name=g10044.t2 NODE_118_length_38166_cov_42.2487 AUGUSTUS mRNA 21371 24841 . - . ID=g10044.t1;Parent=g10044;Name=g10044.t2 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 24332 24841 . - . ID=g10044.t1.exon1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 24332 24841 . - 0 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 24065 24208 . - . ID=g10044.t1.exon2;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 24065 24208 . - 0 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 23642 23786 . - . ID=g10044.t1.exon3;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 23642 23786 . - 0 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 23256 23402 . - . ID=g10044.t1.exon4;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 23256 23402 . - 2 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 22835 23082 . - . ID=g10044.t1.exon5;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 22835 23082 . - 2 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 22275 22405 . - . ID=g10044.t1.exon6;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 22275 22405 . - 0 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 22006 22069 . - . ID=g10044.t1.exon7;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 22006 22069 . - 1 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 21371 21715 . - . ID=g10044.t1.exon8;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 21371 21715 . - 0 ID=cds.g10044.t1;Parent=g10044.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS mRNA 21371 21691 . - . ID=g10044.t2;Parent=g10044;Name=g10044.t2 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 21371 21691 . - . ID=g10044.t2.exon1;Parent=g10044.t2 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 21371 21691 . - 0 ID=cds.g10044.t2;Parent=g10044.t2 #PROT g10044.t1 g10044 MGRPFSLFIVAAVAFAAWHVGSHIHQRQTLYRELASKSTVLLNALEFIGILSAHGDDPHANSAWLGSVESTLGALKDIVSSILPRAKQYAVGVNGCVDLVANALDVTAQLDVRGSDESTLAPHEVVDSLSSFGECFGHYFGHGSAAERFVADERVFKDIVDAAVSLPEGQWYGLRLCAERVCLPDIYAIRFVSTQYFVGGNAALMAEKFANGDVLMNEVMLGAIVGPRLSTLISDNIWVPEQMRAEEDDIHLILEYKKGEKWGGLAAPRANRFIISHDMTNAAMRAMERFADAVKTSSPDTIVVSGLHMLEGLPEDSRMARLDAVTATLADIRSFVDQTPPKGTDVPFIHLELASFADLGFLRSVVQRVLPIVDSIGLNEQELMAAHAALSDSERRGPIAGHASVGVSDALAAMTFLLDSFEAGRLSRVHMHSLPFHAVVQRRGLWSPAGVAVATGSLASTRQNSARVDRIMTTNPFFARDMLPEQACGEESGELHTRLADVTLANTNVDVQWQPHRDAPAGLRATSAGLAVEAVEGPLEIAVAPVLVCRKPTRTVGLGDTISASALERTDKLRRRL* #PROT g10044.t2 g10044 MTTNPFFARDMLPEQACGEESGELHTRLADVTLANTNVDVQWQPHRDAPAGLRATSAGLAVEAVEGPLEIAVAPVLVCRKPTRTVGLGDTISASALERTDKLRRRL* # PASA_UPDATE: g10040.t1, single gene model update, valid-1, status:[pasa:asmbl_697,status:12], valid-1 NODE_118_length_38166_cov_42.2487 . gene 555 5037 . + . ID=g10040;Name=g10040.t1 NODE_118_length_38166_cov_42.2487 . mRNA 555 5037 . + . ID=g10040.t1;Parent=g10040;Name=g10040.t1 NODE_118_length_38166_cov_42.2487 . five_prime_UTR 555 556 . + . ID=g10040.t1.utr5p1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 555 627 . + . ID=g10040.t1.exon1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 557 627 . + 0 ID=cds.g10040.t1;Parent=g10040.t1;5_prime_partial=true NODE_118_length_38166_cov_42.2487 . exon 875 1004 . + . ID=g10040.t1.exon2;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 875 1004 . + 1 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 1361 1465 . + . ID=g10040.t1.exon3;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 1361 1465 . + 0 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 1786 1891 . + . ID=g10040.t1.exon4;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 1786 1891 . + 0 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 2144 2217 . + . ID=g10040.t1.exon5;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 2144 2217 . + 2 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 2518 2678 . + . ID=g10040.t1.exon6;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 2518 2678 . + 0 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 2816 2961 . + . ID=g10040.t1.exon7;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 2816 2961 . + 1 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 3214 3612 . + . ID=g10040.t1.exon8;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 3214 3612 . + 2 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 3875 4150 . + . ID=g10040.t1.exon9;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 3875 4150 . + 2 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . exon 4311 5037 . + . ID=g10040.t1.exon10;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . CDS 4311 4789 . + 2 ID=cds.g10040.t1;Parent=g10040.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 4790 5037 . + . ID=g10040.t1.utr3p1;Parent=g10040.t1 #PROT g10040.t1 g10040 VNKLASSQYSFKLGSPQLEQLRSRGPVEYGMFVRCYPVKPPSTPTAATDMFPAGSILHVNGTIHDKLAHQRKPPTYPLEITHLLRRIPGIENEIVFLNRGRDSCYFSVVFVKKIKSDELISRLKQRAVKSKKECLDSVLKILDVSNHDVIVASTPKFSLLCPLSRARMQLPARGVDCPHVQCFDAVSYLMMNERKPTWECPVCERPTPYEKLYVDSFFVDLVKEMPENVSEIEISESGEVTPVAEDESMQENDDDSSKDIVAVDLDASPIKQEDVRGRPSGASGPSGARNPVVIDLTDDPAPLPAAPGPVLSRQNTNPPSMPASTRTPAPVATAPVTPLAAFAPASGDSVRLARRTAVAAATNALSTLVHSYEVARLLPPSEERTRTLQRLQISVEEARSFLASANAALLAAPPAQPRRLSSSDEDLRREQLVRFGRELDDRLASAPSPHVTAVDRRVTRPPVPPFQANSNPNQSGASLVDRVDRNMAPNLFAADAIPNLQPSDVEMFLSQITADTDEGVSQNDVTDATGASTGHSERDDGESAGTGDTGDAGRDADGDGGSPSLLEFTASNRSPRKRRRVVSSEGDESEPAARRRTLASSGNDEDGEDDSQVDVSGDEDDGEDVDVGGSSEVDDGSEAQTNEWDGSQ* # ORIGINAL: g10043.t1 original gene structure, not modified by PASA NODE_118_length_38166_cov_42.2487 AUGUSTUS gene 19240 21183 . + . ID=g10043;Name=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS mRNA 19240 21183 . + . ID=g10043.t1;Parent=g10043;Name=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 19240 19432 . + . ID=g10043.t1.exon1;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 19240 19432 . + 0 ID=cds.g10043.t1;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 19619 19745 . + . ID=g10043.t1.exon2;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 19619 19745 . + 2 ID=cds.g10043.t1;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 20279 20740 . + . ID=g10043.t1.exon3;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 20279 20740 . + 1 ID=cds.g10043.t1;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 20946 21183 . + . ID=g10043.t1.exon4;Parent=g10043.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 20946 21183 . + 1 ID=cds.g10043.t1;Parent=g10043.t1 #PROT g10043.t1 g10043 MGDTTDAEVEAVRAIEAARCERRHSLDLGYSRLRSVPDSIGTLSQIGMLVLSSNTLVELPSAIGESISRLSKLVCLHLNNNRLERFPTAVLALPSLYTLVLSNNHIRLTRLPATMGQLRELAHLRLHANALRFVPVEVLQLPLLTFITASENCFGTSIARPVAAAAAPSSAWSDATHTRSHAPRTPAEMWAGFRRSDARASAVNRTPSHISTSKPLGLLDLAMEAAVCAGCSLGRKSVPAYLGSMYDAYGGPCYVAGCGRRAWLMRCGWSEDTTLAQKLALSAGVLFASHVCSAHRSNDLCGNNNTESNPIADGIVLSWRMASPRDVIGGNSNSHRESS* # ORIGINAL: g10047.t1 original gene structure, not modified by PASA NODE_118_length_38166_cov_42.2487 AUGUSTUS gene 30156 30826 . + . ID=g10047;Name=g10047.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS mRNA 30156 30826 . + . ID=g10047.t1;Parent=g10047;Name=g10047.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 30156 30266 . + . ID=g10047.t1.exon1;Parent=g10047.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 30156 30266 . + 0 ID=cds.g10047.t1;Parent=g10047.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS exon 30548 30826 . + . ID=g10047.t1.exon2;Parent=g10047.t1 NODE_118_length_38166_cov_42.2487 AUGUSTUS CDS 30548 30826 . + 0 ID=cds.g10047.t1;Parent=g10047.t1 #PROT g10047.t1 g10047 MSRISALRCCGTGARHRTRARSTFLPSSTGCKGITVVREDTAADSGRSRGAGRRLPRRQELAEEVWRIEQRGKDTDRQIERLMSGDVTAAGDVGNGSLAATETTASAGFITGGSRAADGEPRPRRPRPQ* # PASA_UPDATE: g10045.t1, single gene model update, valid-1, status:[pasa:asmbl_705,status:3], valid-1 NODE_118_length_38166_cov_42.2487 . gene 25624 26774 . + . ID=g10045;Name=g10045.t1 NODE_118_length_38166_cov_42.2487 . mRNA 25624 26774 . + . ID=g10045.t1;Parent=g10045;Name=g10045.t1 NODE_118_length_38166_cov_42.2487 . five_prime_UTR 25624 25723 . + . ID=g10045.t1.utr5p1;Parent=g10045.t1 NODE_118_length_38166_cov_42.2487 . exon 25624 26774 . + . ID=g10045.t1.exon1;Parent=g10045.t1 NODE_118_length_38166_cov_42.2487 . CDS 25724 26386 . + 0 ID=cds.g10045.t1;Parent=g10045.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 26387 26774 . + . ID=g10045.t1.utr3p1;Parent=g10045.t1 #PROT g10045.t1 g10045 MTVSRPHTPQTAVVAEAAAGSRPITPASKVAHADGARPATPKDAAAEAKPASRAGSTANIGGGSKVASAANIAAVVAAEHKAASRTGSSANVAAEARPITPAASASRPGSANTADRHLHASPAAAAFWKEKFGSDIGRVALPNFVAELSVHFAIPLDVLEANTSKLPINTKATGHVTVIEFAQLVHGAEDIKEKVLALIQHAAEHAHPPAAEGGDAAAHH* # PASA_UPDATE: g10042.t1, single gene model update, valid-1, status:[pasa:asmbl_701,status:12], valid-1 NODE_118_length_38166_cov_42.2487 . gene 14001 16104 . - . ID=g10042;Name=g10042.t1 NODE_118_length_38166_cov_42.2487 . mRNA 14001 16104 . - . ID=g10042.t1;Parent=g10042;Name=g10042.t1 NODE_118_length_38166_cov_42.2487 . exon 14001 16104 . - . ID=g10042.t1.exon1;Parent=g10042.t1 NODE_118_length_38166_cov_42.2487 . CDS 14437 16104 . - 0 ID=cds.g10042.t1;Parent=g10042.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 14001 14436 . - . ID=g10042.t1.utr3p1;Parent=g10042.t1 #PROT g10042.t1 g10042 MPATNSENHCGRSQHVALSPPLSTHGRDPLAPERDDEDAELGYRSGAVPSPQSLAGSSSSLGSRRRSSSSSTSTNSGSSNPHVISGSERRPSSVTRVPSFSSTYAQDGREDSDTISRRKLSDLDDGAAPLGLRSMRQFAIVPSIPKGSSHHGSREGYEDNEYDDREASECGASNPDMCGDWDASTHGSTSTLESVADKYLTTLLGHPHPPPVTGKHPPSPLRSSLQQRVALSRSMSAPSSPPLTAGKHRSTSPSSPSHGSKDKQDVFLAAGHSNVGQSPRHVGTPPTPPDGGMHPLAELHRRPDTSTHARPRSRTAGDGVDYDDGSLVDIARPRTASRSSPGTSPARRLSGGLRTPPEFAEPLSPSPPDEDPNYMDGDVRPHRRLSRASTDPVAMASRVAKTLTRRGSSESASALKSQIASALGMGDRPSQSSPAPSQSSGSGRITQSGAGAQHAHAHAHAHAHAHAYAYAHAHAQQAIVGTPKRNTALDTVVDHPQRLAAHVSPFGARQSDPLIDGLDAGAPAATPRNSPLFVRRNFPGGPPPPSTQGPYLPDF* # PASA_UPDATE: g10046.t1, single gene model update, valid-1, status:[pasa:asmbl_712,status:3], valid-1 NODE_118_length_38166_cov_42.2487 . gene 26786 29553 . - . ID=g10046;Name=g10046.t1 NODE_118_length_38166_cov_42.2487 . mRNA 26786 29553 . - . ID=g10046.t1;Parent=g10046;Name=g10046.t1 NODE_118_length_38166_cov_42.2487 . five_prime_UTR 29450 29553 . - . ID=g10046.t1.utr5p1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 29436 29553 . - . ID=g10046.t1.exon1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 29436 29449 . - 0 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 29262 29310 . - . ID=g10046.t1.exon2;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 29262 29310 . - 1 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 29084 29167 . - . ID=g10046.t1.exon3;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 29084 29167 . - 0 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 28825 28965 . - . ID=g10046.t1.exon4;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 28825 28965 . - 0 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 28388 28521 . - . ID=g10046.t1.exon5;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 28388 28521 . - 0 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 28093 28211 . - . ID=g10046.t1.exon6;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 28093 28211 . - 1 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 27776 27947 . - . ID=g10046.t1.exon7;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 27776 27947 . - 2 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 27405 27506 . - . ID=g10046.t1.exon8;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 27405 27506 . - 1 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 27194 27311 . - . ID=g10046.t1.exon9;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 27194 27311 . - 1 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . exon 26786 27066 . - . ID=g10046.t1.exon10;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . CDS 26908 27066 . - 0 ID=cds.g10046.t1;Parent=g10046.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 26786 26907 . - . ID=g10046.t1.utr3p1;Parent=g10046.t1 #PROT g10046.t1 g10046 MTDGWDANPFGQALPSRSPFNDPAVLSVTSAPSASADFNAFGSDSTSFGAATITRQASANASNAAQQQPARPASASSANAQGKQPQQGPSAIERELAAKEAALRAKEEELARRQMALDEREIEIANRPAATVIYKEPPPNWPPFPKWCFFPFKSFYYHDIDAEILPQYKRLCRWLYYAWLATCLCWISNFVGSFAVLVGCSECSGDLGPSFGLALVYMFLFIPLSFICWYRVIYNGFKKDSTLSFFWFFFAFSFQILADVVNTIGIPSSGSAGYIVAISALTKNVAVGVVCIIASCIWTANTVFSIFLIKKVHEAYKTGGKSWTQAQSEAIGTVAGSRVVQEGIKSSILRNQHENDDDELFAG* # PASA_UPDATE: g10049.t1, single gene model update, valid-1, status:[pasa:asmbl_713,status:12], valid-1 NODE_118_length_38166_cov_42.2487 . gene 34871 37915 . - . ID=g10049;Name=g10049.t1 NODE_118_length_38166_cov_42.2487 . mRNA 34871 37915 . - . ID=g10049.t1;Parent=g10049;Name=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 37791 37915 . - . ID=g10049.t1.exon1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 37791 37915 . - 0 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 37567 37667 . - . ID=g10049.t1.exon2;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 37567 37667 . - 1 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 37265 37389 . - . ID=g10049.t1.exon3;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 37265 37389 . - 2 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 37079 37163 . - . ID=g10049.t1.exon4;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 37079 37163 . - 0 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 36461 36922 . - . ID=g10049.t1.exon5;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 36461 36922 . - 2 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 35925 36238 . - . ID=g10049.t1.exon6;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 35925 36238 . - 2 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 35583 35710 . - . ID=g10049.t1.exon7;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 35583 35710 . - 0 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 35352 35449 . - . ID=g10049.t1.exon8;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 35352 35449 . - 1 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . exon 34871 35240 . - . ID=g10049.t1.exon9;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . CDS 34948 35240 . - 2 ID=cds.g10049.t1;Parent=g10049.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 34871 34947 . - . ID=g10049.t1.utr3p1;Parent=g10049.t1 #PROT g10049.t1 g10049 MNLGSKLALVNPKQTQRLFEYVLELAKYDASYDIRDRARFLRRLLGGSDRPIPSDAVKDIIINEKPAPVLAPSVAEIDAFRLGTLSHLVRAPVAGYVELPSFPEVAPDPSVRNVYVPVAVPVVGKDGKAVKAKTKGFYSDDDESSESDSGSDSDSGSSDTSDRSSSSNQSGYESAEGSNRSRSESSSDSDSNSDSDSDSASSSESSSSDDAARRKKATPSKAPAKATPAKKPTPSSKKAARASSSESDSSSDSGSSSSSSAATPPPSKKGAKKEAPKAATAPSKEKTKKPIEANLLDLDFAPPPTQSNSLLTPAGGSFQGLTAQPSGGSAENATKTPGSFPVAPTAHVPQTSYPLLAKGAGKGLAIEYRYMRRPSMYGDRMVTLQALLANQGTAAVSNIRVSDKMLEKGLALKGGEDIGTLDAGISKEIILGVDFNDSLRPAKFEIACDEGSFKVAIEPKVGELLQPIQMSEADFNAAQGKLTGMHENASKISPADCPTPLSDMSRRVCEVANVAVVRADAAEGVWKFAARTLSAGVFVLILVRTDTAKPQVSVHCENMVVGSVLLKDIRPIFASA* # PASA_UPDATE: g10048.t1, single gene model update, valid-1, status:[pasa:asmbl_715,status:3], valid-1 NODE_118_length_38166_cov_42.2487 . gene 31877 33487 . + . ID=g10048;Name=g10048.t1 NODE_118_length_38166_cov_42.2487 . mRNA 31877 33487 . + . ID=g10048.t1;Parent=g10048;Name=g10048.t1 NODE_118_length_38166_cov_42.2487 . five_prime_UTR 31877 32043 . + . ID=g10048.t1.utr5p1;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . exon 31877 32176 . + . ID=g10048.t1.exon1;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . CDS 32044 32176 . + 0 ID=cds.g10048.t1;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . exon 32266 32494 . + . ID=g10048.t1.exon2;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . CDS 32266 32494 . + 2 ID=cds.g10048.t1;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . exon 32616 33487 . + . ID=g10048.t1.exon3;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . CDS 32616 33324 . + 1 ID=cds.g10048.t1;Parent=g10048.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 33325 33487 . + . ID=g10048.t1.utr3p1;Parent=g10048.t1 #PROT g10048.t1 g10048 MSGPSFYGYIRDAHDAEFVFRMAAENRCRKIQKRLHYKTDNIRDGQGYVYDEQQSKIKRWTDGFNWGDSYHPGGKVMIYKEVDIVWEDNKIKKVEKPFGLRKKTIADYNSNTRIVCYYFEKEILNYPPIRMCMDQPTVATKPAPPAPLLPTRLAVPQPVRRSAEAPRQKSSPAPSMASQRATAATPAQTAPMDASQLCVTSLLRAAGCLEGDELPPPPKIVNGPPASARHVSPVSVPPRKRAYEAEEVHDERAHKVMRMSYPPASHDYMHAPPQVMSGPMVPHYDVSSYEHMAPVCYPPVQRHLQHPMPMHMMQPGSPAPYGYPGYHQAMWQQSTMMMPANVRKASTFSIENILCK* # PASA_UPDATE: g10041.t1, single gene model update, valid-1, status:[pasa:asmbl_698,status:12],[pasa:asmbl_699,status:12],[pasa:asmbl_700,status:12],[pasa:asmbl_708,status:12],[pasa:asmbl_709,status:12],[pasa:asmbl_710,status:12], valid-1 NODE_118_length_38166_cov_42.2487 . gene 5115 13849 . - . ID=g10041;Name=g10041.t1 NODE_118_length_38166_cov_42.2487 . mRNA 5115 13849 . - . ID=g10041.t1;Parent=g10041;Name=g10041.t1 NODE_118_length_38166_cov_42.2487 . five_prime_UTR 13725 13849 . - . ID=g10041.t1.utr5p1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 13722 13849 . - . ID=g10041.t1.exon1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 13722 13724 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 13449 13596 . - . ID=g10041.t1.exon2;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 13449 13596 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 13007 13299 . - . ID=g10041.t1.exon3;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 13007 13299 . - 2 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 12765 12846 . - . ID=g10041.t1.exon4;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 12765 12846 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 10032 12571 . - . ID=g10041.t1.exon5;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 10032 12571 . - 2 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 9579 9776 . - . ID=g10041.t1.exon6;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 9579 9776 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 8996 9343 . - . ID=g10041.t1.exon7;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 8996 9343 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 8726 8815 . - . ID=g10041.t1.exon8;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 8726 8815 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . exon 5115 8520 . - . ID=g10041.t1.exon9;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . CDS 5170 8520 . - 0 ID=cds.g10041.t1;Parent=g10041.t1 NODE_118_length_38166_cov_42.2487 . three_prime_UTR 5115 5169 . - . ID=g10041.t1.utr3p1;Parent=g10041.t1 #PROT g10041.t1 g10041 MKRGGGPGARGRGAIQPRGRVIAGRILSNAAPNQPAAPVAAIRGGLKRGGARGAFRGGAPKAAAQSPVAENAALDGADGGAVADAGAAVIKEGGIDENANNTSLHVKGVPANLNNEVFLRSHFSKYGAVISVKSYMAKSYATVEFVDHNSAANAKRHGKTMQNHPLKLFWLQPTGVTAAGAGAGGVDKHSLNNATAATSAGPAANPFAVAQTGAQGQLAFGGGIGATATQPQNARGTPFQAAGGFGTQHPGQALGAMGGATAPMNAFGGAQLAVPGTNPFFGGGQTAHAGLGVGAAAWQQMAFGQGTLQQQLQQQQLAAASPFPMATAFGGGGFGNVPAALQQGGVQDDIMKARLAQAQEAANNAMRRRRESESSVPLATVGGFGAGGVGGRVADTPSFVPATGQGATPMSGVVAPGLTFKIGRPQRVSAFGVDNATADGAKAFGGGFGLFQQQKQQQQQQQQQQQQMQQMQKQNTMNEQQEQMQPSLGLFAKAPENAFALAPNKAAQNPPADGNGANSGDDDDNTPTSPAQKQQQLADLRNELLRAKHEKEAARNEAAAQLKALQKPAANVPDAPPQSNTRGTVEAIRGRGAKTARAMSAIAAAAIAAATGKGVPASGVAVDEPPEPGEVGVEERGGAENVTTGTAASVDASENNGDGTSVDLNLSASSRDLKRRRSMQDAARQLVAKAKAKALGTQIKGVGVGVGVGGTGAGRGRGVGLAAKAALTVTSPKQSAAVALRGPPAQAALARPRGVQEVQGTPTPLVPSPAVISNALAAPALATGEAAGPIAPAPDAFLRALASTDVQLPFKLRATAAPYVPPPAARQPPQQRPQQPQQQPQQPPQQQQVQREYVDGADAYGSEDEEAPLQGDDRATRFGAAAGEANVRYRILQKRDEVMRERRKETEKHGQQKGLESASSVVGTCPDMCPEKERYEREVTNELSVFETVGGAAFRMEEGPDGERARREFPRVDHRLAVKKFRRPAAGLEDPLPHELRSPQALSATMAYLLGHLLDSTRPWDEVYKFVRDRTRCIRQDLTFQNIRDTTAVDLTEKTMRFLIYASHRLCMEDMTAFSPRQNEEQVNKCMQSLAEFYADIREQSDGAASETLPCPNEPEFWSYYVINNIGNPDILRKVCGFPAIVRESPSMQTAMAAFAAESEKNYARFFKIVGTEATFLQACMLHKHFCRVRLGALHTICFAYKTYKTFPLSDLVRILGFEDEEDAASFCIHYGLQVEGSNLLLSTPVQPAGDIAPRRSFRLIESKQGSSSIGDIVNGAPLGKLPIPTPHTCIASDGTTVLAQPVPMSGLGRLPPPSTAAKGVVPVAAGTASTPADATKSLGLPPPYVANMQAGAVAPPAGVAGGVNSAGVDGVTAHQQRILFARSEIGTKLAAVFQESVMQHVTDVATEVVEWAGTVSRLSRDLADELVADEAKTLTRGIVVEAIGDANRAREADADRQRKEDDRAAVVAAARDVADAIAHEVTMEMTRRVVQETRHEAVKEAAMRATISALVAEMVEEEATTTAKYAVSAAVAVEHRSSQLLRRTLRTWRVRYLSRHRLRSLLSTFDISGAKLFLPPSEQIDRIVGENGREALAHSRAQRKRARTLSGSGAVRGNLTYPGIDADNADAMLFHAHQRAGTALREAAQSVTPIDLVKAIAPSIVRAAARSGHGADGLAPMHFKLIVSVPQSSFAPRNSDVVATSSVTTAERAAVDLAQWLYGRLRLGAVPESNNVMGNAEWPLLSLYSADVPAEGVGLESREAVRSSLCVKVCVRAETKDSSVPAFASCDADFLSGATAIAFVPSGNPVKDAVRMRRILAYLRGRRPLVPLLVLRPGAAACYGLAASGISPAEAEGAVVEAAEWHGLRPIDALPTSHAAAFSAESLSSAIQWLSLRAEPRPFPELSRYSVRGLAEKALEMQLDAEQKASRAVDLLSIRNMDAAVTAVVTCLGEAVAAFNRTVIAVASLATVAGHMGLSWPPMEFAPTGDSTGSSARAATSSGAEGSAVVDASLPLAGWSAPDRLEALKQSLLSISLPSRAIAMAMEAASKAEASVDALSRVVALVTEFACASVGIRHLQDNSPLVHGVAGAIRRLFIRGRASGAISAADVVVTCASVVSEVAHAVVERVLIDDDTTSTGSQVCFVFESDLARLQPSVTLWAPPPPMQSTSSLEARGAAVGSEDVVVRPVNKKRGGEEAFSDSACPSENSPASASKRSRLAHPASSYAASTTGADRPGLFSASQNRTDANDGLAGLSDAMRRERQLQEDFTRTLEAASRMDPVTLMVSPVSAMTPGDRMDVDYPTRGAEWSSPSGSVRVATDADTLDELLVRIGEHRKQNVLAGMRLEAMLGQ* # ORIGINAL: g10123.t1 original gene structure, not modified by PASA NODE_795_length_17612_cov_40.9787 AUGUSTUS gene 13537 14391 . + . ID=g10123;Name=g10123.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS mRNA 13537 14391 . + . ID=g10123.t1;Parent=g10123;Name=g10123.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS exon 13537 14391 . + . ID=g10123.t1.exon1;Parent=g10123.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS CDS 13537 14391 . + 0 ID=cds.g10123.t1;Parent=g10123.t1 #PROT g10123.t1 g10123 MDDDETPEAVVIGEIDLAAKRKDVETIALLMQHNPQNDNVQLVDCKAFAALSFDANGVDVDAVAGGVRAVIVAMTRNAIHAPLQSSGCDALKALVRSTNQWPRGIGMEAIGAVLSAMKMHPSDESVICSACEALGAFCCTTESMKGKKKRAQKAVADAGCIGAVLDAMKQHPSLTRVLQMGCFAVRYIVADHSTNAAAVGRCGGLATLALAMESHPDAEGIQFWGCAALRHLAAVGANRRILRELHVERTIAAAMDTHTHVRDLRDAQFVLEKLRSSDCANSLT* # ORIGINAL: g10122.t1 original gene structure, not modified by PASA NODE_795_length_17612_cov_40.9787 AUGUSTUS gene 10019 13072 . - . ID=g10122;Name=g10122.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS mRNA 10019 13072 . - . ID=g10122.t1;Parent=g10122;Name=g10122.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS exon 10019 13072 . - . ID=g10122.t1.exon1;Parent=g10122.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS CDS 10019 13072 . - 0 ID=cds.g10122.t1;Parent=g10122.t1 #PROT g10122.t1 g10122 MASGNQPGLPPMQRLWTIAACGNVAELRDLIAENHAAESAGKALFDYGAADSSGLTALMHAVRGGHVECVRALLANGGRTVLETINNTTADNSECEGRSVLHFAAHSDAFLGTADAAGDWESAQADTVAALLAAGANPNLFSAKTSNAETPVHVASRCAGLAALKLIVAAGGDVNIFSKGLRKTALLSALQWSTTPHVLEFILDCGADIGAVDAGGSTAMHLCTQSDDATLLDLLVSRGGNVNAAGGVENDLGSIAKSVNEGQYTRPVDEAGDDGNADDDEDREVVEKPQKSGNKKRPLHHFLYHTRKSPAVLAALLRHGADPNAPDDQGNTPLQIVDMGYGDASTRAALIAGGADDWMTPLDDAVKAQDVERVATALKDEKAAAWVNPTSSRKSDPPLLVAVRSKRGDIAKMLLDAGARATLTGMSGDSAVTYAVLQAQPDMLRVLLDSGLDPNFSVDDDSDGSRETNVGGGGTLRDGCTRLLHWALQVKIDDYNCDDDDDFNCDDDDDGDREDDDGDGDDAGNDVGGENEDPDDIVKQVVKSKAAAQKMVDHRQPGEGELAVAAMVDLLLSHGAYHSPRDRHGCTPLHYAATYLNAEGAVRLIAAGADPLAATNDGLSVFSLFAQMDLNVRQDVPDVEQVFRSLSADAAYALFSRRAKIDEHDDNGVDDDAVNYDSDVSEVGKLVGDWSYRASGFSADDMESINPSLVRLRAILSRAADMTSSAWALHDAICKGDPYAAAHLLSEGHDPLRPDRYGLRPMYYACRHSDPALARALIDAGCPVNAPCTPSHNVPSPIYVAALYGNADVVTALIDAGADVNARGRSVSAPSVLHAAVLGGNTALVDALLLVGVDPNSTPEQGFAGSPVPPLLLACMLGRGEIATRLRRAGAAVKCGGGRVLLHFARGLAVAAVLAMGENCGPVHARDDFGRTPLHLSARRGDAMTTAALISAGADTDVLDAYRRSPLWYAQRTARAKGRGGPAVLKKAERFCVAQGLYGAMQHADVAALLIAAGGAQ* # PASA_UPDATE: g10121.t1, single gene model update, valid-1, status:[pasa:asmbl_9412,status:12], valid-1 NODE_795_length_17612_cov_40.9787 . gene 2694 9493 . - . ID=g10121;Name=g10121.t1 NODE_795_length_17612_cov_40.9787 . mRNA 2694 9493 . - . ID=g10121.t1;Parent=g10121;Name=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 6755 9493 . - . ID=g10121.t1.exon1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 6755 9493 . - 0 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 5979 6430 . - . ID=g10121.t1.exon2;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 5979 6430 . - 0 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 4824 5665 . - . ID=g10121.t1.exon3;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 4824 5665 . - 1 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 4545 4630 . - . ID=g10121.t1.exon4;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 4545 4630 . - 2 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 3875 4022 . - . ID=g10121.t1.exon5;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 3875 4022 . - 0 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 3430 3703 . - . ID=g10121.t1.exon6;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 3430 3703 . - 2 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . exon 2694 3210 . - . ID=g10121.t1.exon7;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . CDS 3198 3210 . - 1 ID=cds.g10121.t1;Parent=g10121.t1 NODE_795_length_17612_cov_40.9787 . three_prime_UTR 2694 3197 . - . ID=g10121.t1.utr3p1;Parent=g10121.t1 #PROT g10121.t1 g10121 MDESSRGDGRGGGRGKGRGGRGRGGSGRGRGGRGGLAHGDEDDDGDQHTQQQAQSQPPHGDVADAPKRILLKRGEGSAPQSASDVRHDHAPSERVSRGGRGGRGGGRGGRGGSSADADAVGPQHQQQQQQQQQQHQSTTQGGRSNAQKGFAAPREDEGEGKGRGGASRGPRGRGRGGREGGARDEPRGADAADAKRRKEEDDKKKADTEAQRKAEEAERARVAEMERIAQEEAAQKQRDEEEAKRKEEAERRELEEKRLAMEAEKEAIAREEAFRTLRAANTSAWAAGGRPDESFFRNLDSSLKRNTAFVKKLKTMTGEQSESLCNELKAVNLTKYVSEAVGAIAEAKLKLTDVIGAVKVCSLLHQRYAEFTPLLYSALQKQMSAKEALKDEDRPARILRLRVLLRLAGELVVAGVFNEHGIVVSTVRELCALDAKEHAFSAVLVAFCKSCGGDLVGLVPSGPSKRVLPEGQAARDPILRPDVRQVVSAALASYCESLSAHAIRDHKELKERERRNSTIIQTKGELSEELRDRYEKQLKAFDKLLASATSLAELVGAEPPNLPKDETSTRVDAPSFLEIYTPAQRGEGAEGDSFLWEDEEQRAFYEDIPDLRAFVPAVLFGSSAVTPAATTASTADVGAAPAAPLSTDDKGVSGDAAGTSAEADAAIDAEAAEAALAAAMKELMIDDDSGDESKGASASAPGNDGRQRAAASAAEVDAMLQRLPTCMNRKDIDELATAFCYNNSKGARKRLIRALFAVPRNRTDLLPFYSRLAAVLKPCIPEIGDSLVSMLLGEFRRDQTKKDQTNVEDKLRVLRYFGELAKFGVVPKQEALNVLKRLLDTFTHHNIDCACVLLETCGRFLFRSPDSHVRTRNLLEVMMRKRSVQHMDSRQSGMIESAFYYCNPPERQKKAKKVRPPLVAYVRHLLYDRLDSDSTEEVLRQLRRLPWNSKWQSAPAPKPQQPQAAQPVAEGSTAAPAEGSNPSVDPEAKEDAGAQAVRYVVRCLCRPWKMKFGNIQNLASIASGLAKYHDEVQVLVVDATLEDVRLGLEVNIPKWNQRRISVVRYFGELYNYRLCESVVVFETLYRVLFFGHNMSESGRPLYAPPSDAADDYFRVRLVCSLLDTCGQFFGSGSSSKKLDCFLAYFQRYYWSKVQPLPIDIEFTLTDMYESVRPKARRPSSYEDAAASVAGIEMEMLNKAGVVKEKERQANDEEGSESSSSEDNEDEDDEESDVSSAGTVGPAEAADEDGSDEGSSDDGSDDDGGDRSDDLGSADEDEDDSDSDAVLLRKRQAAEKKEVDEEFLAEYNRLMTESIEQRRAEVGRAPVLDVAVPMHLRGAASRVRPAVDDHGDGDEEPRGAVMFTLLTKKGNKQQLRELEVPADSSFASAAMSQQKAAMDEKNEMKRLVLQYEEHGDYEEDPNGDDRGGGPAHGGHGYRGRGGHGGSGRMNQKNRRLLQSHQVQEFHDATQSQQVYFGQPPSAHGQNYHPQGHGHGQSHGGHQASGGGARGGRGDGRRR* # PASA_UPDATE: g10120.t1, single gene model update, valid-1, status:[pasa:asmbl_9411,status:3], valid-1 NODE_795_length_17612_cov_40.9787 . gene 994 2508 . + . ID=g10120;Name=g10120.t1 NODE_795_length_17612_cov_40.9787 . mRNA 994 2508 . + . ID=g10120.t1;Parent=g10120;Name=g10120.t1 NODE_795_length_17612_cov_40.9787 . five_prime_UTR 994 1197 . + . ID=g10120.t1.utr5p1;Parent=g10120.t1 NODE_795_length_17612_cov_40.9787 . exon 994 2508 . + . ID=g10120.t1.exon1;Parent=g10120.t1 NODE_795_length_17612_cov_40.9787 . CDS 1198 2445 . + 0 ID=cds.g10120.t1;Parent=g10120.t1 NODE_795_length_17612_cov_40.9787 . three_prime_UTR 2446 2508 . + . ID=g10120.t1.utr3p1;Parent=g10120.t1 #PROT g10120.t1 g10120 MVHPAIIAAGAAALPFVSACLVYTLYGWPKDGRGPFNPRRVFALNIALIHQLLSVKHAPLFLRWTSHYRNASAPHVHKDIPYGTGRTLDVYAASSPSLSSQGSVRSAGAASGRSETSRETLCPVVIFVYGGAWGNGDKSMYGLLASRIAREGILVIVPNYVLHPQGVVEDMTRDIRNAYAWTRSNALSYGGDRERITLVGHSAGAHLCILSVMTCPELAVKSVVGLSGVYDIADHYRHEHGRGVESVSPMRPVMGGPSDFAQHSPSRLVEDGLWPPACAPCIAGRRQRALLDPSSHVHAQSDLVGSALTPSSTEHDSAKLAPGTCLREGKCAYFDDGIATTAIPDIVLAHGVLDATVPVHSSVRLARALESAGVPVRLDIFPDGTHADFVLDLMCPQRKLHNALVDVIVGAVKRT* # PASA_UPDATE: g10124.t1, single gene model update, valid-1, status:[pasa:asmbl_9413,status:12], valid-1 NODE_795_length_17612_cov_40.9787 . gene 14677 15820 . - . ID=g10124;Name=g10124.t1 NODE_795_length_17612_cov_40.9787 . mRNA 14677 15820 . - . ID=g10124.t1;Parent=g10124;Name=g10124.t1 NODE_795_length_17612_cov_40.9787 . five_prime_UTR 15783 15820 . - . ID=g10124.t1.utr5p1;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . exon 15658 15820 . - . ID=g10124.t1.exon1;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . CDS 15658 15782 . - 0 ID=cds.g10124.t1;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . exon 15416 15495 . - . ID=g10124.t1.exon2;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . CDS 15416 15495 . - 1 ID=cds.g10124.t1;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . exon 14677 15311 . - . ID=g10124.t1.exon3;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . CDS 14707 15311 . - 2 ID=cds.g10124.t1;Parent=g10124.t1 NODE_795_length_17612_cov_40.9787 . three_prime_UTR 14677 14706 . - . ID=g10124.t1.utr3p1;Parent=g10124.t1 #PROT g10124.t1 g10124 MDEANELKKAAQGLLEAVMNARIGAEKYDESVGAVLPPERESLLQWHKYREWLKRQLEEYADADIEPMDTDEPTTETQLHESISTLQDRLREANTRRSRQSLLVHRLYESNVVLDAVFPGGSDDAELSEAGPSSEKAALATAVTHRDNLASDFLDAHAHHEEMRATLRTLQSQTCDAQEENCRLMQELEDMKDARSRQTEEAEGSASDVVRRRRKELEVALARNSILRNVFQALIVESGADWADDLEMQEILLALGDAPLDDVSGKGRL* # ORIGINAL: g10125.t1 original gene structure, not modified by PASA NODE_795_length_17612_cov_40.9787 AUGUSTUS gene 16374 17337 . + . ID=g10125;Name=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS mRNA 16374 17337 . + . ID=g10125.t1;Parent=g10125;Name=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS exon 16374 16580 . + . ID=g10125.t1.exon1;Parent=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS CDS 16374 16580 . + 0 ID=cds.g10125.t1;Parent=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS exon 16782 16958 . + . ID=g10125.t1.exon2;Parent=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS CDS 16782 16958 . + 0 ID=cds.g10125.t1;Parent=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS exon 17095 17337 . + . ID=g10125.t1.exon3;Parent=g10125.t1 NODE_795_length_17612_cov_40.9787 AUGUSTUS CDS 17095 17337 . + 0 ID=cds.g10125.t1;Parent=g10125.t1 #PROT g10125.t1 g10125 MALPGMKPFHVAHVSQHPRGKMVMESAIVRRRQNEDFSREAWDHTADKFKREAAVASKLKAWSLRAPGAGHGQMDALLREKIEDERRTQLDLRRRRLAQMLRDDEEEFQMEIQSLRETPHQRMENMRLRAEDLRTRREEERQRTVDEKMRDLLLQNVPELREAVTQRFRGEMYDTIRDQVDAKEDERMRAFAEKEKFDREWIEEGVCM* # PASA_UPDATE: g7820.t1, single gene model update, valid-1, status:[pasa:asmbl_5326,status:12],[pasa:asmbl_5328,status:12], valid-1 NODE_2973_length_4616_cov_31.7257 . gene 473 2583 . + . ID=g7820;Name=g7820.t1 NODE_2973_length_4616_cov_31.7257 . mRNA 473 2583 . + . ID=g7820.t1;Parent=g7820;Name=g7820.t1 NODE_2973_length_4616_cov_31.7257 . exon 473 529 . + . ID=g7820.t1.exon1;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . CDS 473 529 . + 0 ID=cds.g7820.t1;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . exon 999 1097 . + . ID=g7820.t1.exon2;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . CDS 999 1097 . + 0 ID=cds.g7820.t1;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . exon 1420 1535 . + . ID=g7820.t1.exon3;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . CDS 1420 1535 . + 0 ID=cds.g7820.t1;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . exon 1802 2583 . + . ID=g7820.t1.exon4;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . CDS 1802 2138 . + 1 ID=cds.g7820.t1;Parent=g7820.t1 NODE_2973_length_4616_cov_31.7257 . three_prime_UTR 2139 2583 . + . ID=g7820.t1.utr3p1;Parent=g7820.t1 #PROT g7820.t1 g7820 MGAAFCASVIKTIRLPSLRVSTILLSLFFVYDVFFVFITPLFTSHNKSVMVEVATGGASGGSSPERLPLVFSLPRLLNPMSVCADFDTMLGFGDIIIPGLFAAFCLRCDYRFRTNCYPYFIACVVAYGVGLLLTYLVLILMQSGQPALLYLVPCVLLSAIITGALRSELGIVWRDEIALYRPIIGMGMRSVERDPHQGIKST* # ORIGINAL: g12450.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 9861 13349 . - . ID=g12450;Name=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 9861 13349 . - . ID=g12450.t1;Parent=g12450;Name=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 13200 13349 . - . ID=g12450.t1.exon1;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 13200 13349 . - 0 ID=cds.g12450.t1;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 11015 12963 . - . ID=g12450.t1.exon2;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 11015 12963 . - 0 ID=cds.g12450.t1;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 10637 10831 . - . ID=g12450.t1.exon3;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 10637 10831 . - 1 ID=cds.g12450.t1;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 10248 10433 . - . ID=g12450.t1.exon4;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 10248 10433 . - 1 ID=cds.g12450.t1;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 9861 9978 . - . ID=g12450.t1.exon5;Parent=g12450.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 9861 9978 . - 1 ID=cds.g12450.t1;Parent=g12450.t1 #PROT g12450.t1 g12450 MLPIALHILRVDEAKAYLLAVEVDPALGDADEAAAAVVIGEQAEGEADRAPVKKDAEANSKAPPSSAVAVAPVKTPVVPKPAASNGATAAKPTTPVSQPPPLPKEPPPPPPPVEPPVAPPLPDGPPPLPPGSHSHHAHTHAHTHDQQHENGRPVHAHPPPPPPPHEHHHNQHNQHNPPPPRAAQHDDTRGGSASSLRPHTTGGHWGGGFPSLPPPRLPGGPFGAMPPPAMRGPPPPPTQQSSYGPPPVTHHGSHGSHSGPQPPSPLPPPGHRGNPPLSGRPPPPSHPIPQSAPPPLYHGGPSSDSHAAPGHAHGSGGGPPLPLPSPQAPRHQHAHPHPQNHHQSHHQNHLQQHHSNSAPLNGPPQQTPTGAPRVRGPPPPFAPSGGGIQRHPPPSLLSLSQGLPIHTPMRHGPPLTSPNPPPRAHGVALLPPPPSPGVHSAGMQQQQHAHFAAPTAAVPHPPVSPFPPAVSGQMSGQRASVTAERPSPRVRPEEQFGSRSVALFDIEKQIGEGTYGQVYKAHERATGDVVALKRIRMDSEKEGFPITAVREIKILSQLQHRHIVHLREIVTEQQSLVDFGGGKISIYMVFDYMEHDISGLFQEPETVNLSVQQVRSLTRQLLEGLAFCHDNRFMHRDIKGSNLLVNSAGHLQIADFGLARNCSDDERQYTNNVITLWYRPPELILGECTYGKSVDMWSVGCILAEFLAKRTVFRGNDEISQLDAIFKVCGSPTNQNWPEHDKLPNCRSMRMSRFYTRRLKDEFRLRGVVEDGGVTGGHLIDSNRRFPPDALDLVDKLLVLNPSERLDVHAALAHPFVQGVVRTEPLRLNADGHYHEFSAKKRKRARESESAANAPPPTAGPTFLA* # ORIGINAL: g12449.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 5114 7876 . - . ID=g12449;Name=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 5114 7876 . - . ID=g12449.t1;Parent=g12449;Name=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 5933 7876 . - . ID=g12449.t1.exon1;Parent=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 5933 7876 . - 0 ID=cds.g12449.t1;Parent=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 5596 5800 . - . ID=g12449.t1.exon2;Parent=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 5596 5800 . - 0 ID=cds.g12449.t1;Parent=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 5114 5442 . - . ID=g12449.t1.exon3;Parent=g12449.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 5114 5442 . - 2 ID=cds.g12449.t1;Parent=g12449.t1 #PROT g12449.t1 g12449 MLRFLGLHRGGSPSGSSGGSPRASRVQYYSLRKERRIRIPESPLVRQRTVHDRHSLSPMSAQTQAQSNARDGHSDPDPDDDEPTLFDLVVANKSRAALIFLSSLDVVDRRRAILQVDAKKNTALHAACSSGASECAAVILGSAAATSVDGSEMLYLHNGDGLAPIHCAAAAGHVRCMLLVARAMSAFTPPVPHILKVESDGESLSSCFTPCADHARAPTSTADFRTVSGASALDIAAGAGHSACVEALVGAFGSVSGGMSCMRCRGGLKRETPLHCAARAGSVACVAALLSAGACVADVDAMGRTPALVALRHESIECVEYLLCADTSASPDSPYLALPVSTLSKSGLCAECGSVGCCAWLHERAGALTMDVDAANRMRALFHAHDTGHVECAEYILSRADATDKRLLACAWLLKSKGVPVGDLKFTAQRVHGRRRASTRTRVDVESQGNSIRDALAFSAIMGASWEQLAGGVTVQFDAEAGKGPGVNREWMRVAWEELADESVGLLVSHDSGHTHHPRRCSLNADGEAREDVRVGGEQMCRERAFRLMGRLVGLSFLHEIQLPLHLSRPLLRFLAGIDAANPADMAGFDPDFASSVVDYVTANEVGSLGLTFTDVETIALGDRTVHREFELCEGGFSMDVTDANKDQYLRLLCHARVVRGLERELSSFREGLHDVVPLSQRPFVSVFAVGNGPAEFDVILSGLSHIDFEDWRDNTGFGEGYTSESPQVQWLWEVIRSMDGKAKAALLRFVTGSPSVPFGGFGSLRGLQGPQPFEIHRANGNDATLPSAATCFNRLFLPAYSSAAILAAKLTKAVEYGGAGFVFV* # PASA_UPDATE: g12453.t1, single gene model update, valid-1, status:[pasa:asmbl_8372,status:12],[pasa:asmbl_8373,status:12],[pasa:asmbl_8374,status:12], valid-1 NODE_594_length_20461_cov_41.0374 . gene 18086 20215 . + . ID=g12453;Name=g12453.t1 NODE_594_length_20461_cov_41.0374 . mRNA 18086 20215 . + . ID=g12453.t1;Parent=g12453;Name=g12453.t1 NODE_594_length_20461_cov_41.0374 . five_prime_UTR 18086 18261 . + . ID=g12453.t1.utr5p1;Parent=g12453.t1 NODE_594_length_20461_cov_41.0374 . exon 18086 18885 . + . ID=g12453.t1.exon1;Parent=g12453.t1 NODE_594_length_20461_cov_41.0374 . CDS 18262 18885 . + 0 ID=cds.g12453.t1;Parent=g12453.t1 NODE_594_length_20461_cov_41.0374 . exon 19085 20215 . + . ID=g12453.t1.exon2;Parent=g12453.t1 NODE_594_length_20461_cov_41.0374 . CDS 19085 20215 . + 0 ID=cds.g12453.t1;Parent=g12453.t1;3_prime_partial=true #PROT g12453.t1 g12453 MATFATVDEWLNSLKLEKYIENFTSNGFDDMDVVATMTPDDLDAIGVTLAGHKKKIVLSLQKLNESRPAAPAPAPAATPAPTPAPVEVSAPAPVVEEPVAVAMPAPVEAAPTPAVVEEPIPAVDEPAAEIEIAEEAPAPVVVARPTPAAKADRPLSLSDVLAGFDAPAADEPPPVEDEEEEVANVPEVNTKIDALLDDFMGELDDFNMDDLDSIMSSAAKTAEADAPRRPSVNVTEPIPTPAAVQTFSTSQEVADTPEATPASAVEAVPDLTTESINTDFDDLDALMNQIQFSDADFSSFAIAATAAETSNNATSSSSPGRTDSPAVDASGASFAAAVSEVSLDSLVLDLAAFESETNFIQFTGSEPLLDQEAGAEEDAASKTDGAAGAPASANFEDLAKSRMSIMLNNSSELDLDALLEDLDALSVPGETTPATAEPVHAAPVTQVAAPAAAAVAVASAPVQLSPNDALKNEISTFDHRRPTAELSEPEKQRRKEEKIKIAMAKMAEASVKKLVIKVYNEDGSSKMLPIDSTMTAFDVALLAVQKNAAEPGPNWCLLEMNAPLGLQRTLEDHENVIEANTAWGM # ORIGINAL: g12447.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 45 1842 . - . ID=g12447;Name=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 45 1842 . - . ID=g12447.t1;Parent=g12447;Name=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 1725 1842 . - . ID=g12447.t1.exon1;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 1725 1842 . - 0 ID=cds.g12447.t1;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 1430 1605 . - . ID=g12447.t1.exon2;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 1430 1605 . - 2 ID=cds.g12447.t1;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 1241 1310 . - . ID=g12447.t1.exon3;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 1241 1310 . - 0 ID=cds.g12447.t1;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 45 1012 . - . ID=g12447.t1.exon4;Parent=g12447.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 45 1012 . - 2 ID=cds.g12447.t1;Parent=g12447.t1 #PROT g12447.t1 g12447 MALVDENIDDLVALPELTDSTILESLRIRHETSRIYTFIGKIVLVAVNPFRDVDNATPTGVSRINPFAKTSMYGPEAANAYKVARAGELPPHVFAIAQEALYALSRDGQNQCIIISGESGAGKTVATQHVLRYLALQSGRQDAVSRKLMAASPILQAFGNARTVSNNNSSRFGNYVEVEVDQHSLAVLGASVRYYLLERSRVVRPPPNERNYHAFYCMLESPRQRERLSLGSATQYEYLRRSECYNAPGIDDYAEAERLESALLMVGLSDEQIDGLFSVLHGILLLGNVGMKSRMGEGNIEVAEVTSKAEVERAATALQIPVDRLCRALTCNERSFGGGEKVTVGMSLEQASVARDSLAKALYVGVFALLVDRINTTLRIEGNGGFALRGSEESEKDDDGPRRRVVGILDIFGFENFEKNSYEQLCINFANEQLQQFFVLYMFK # ORIGINAL: g12448.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 3120 4959 . + . ID=g12448;Name=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 3120 4959 . + . ID=g12448.t1;Parent=g12448;Name=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 3120 3187 . + . ID=g12448.t1.exon1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 3120 3187 . + 0 ID=cds.g12448.t1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 3360 3488 . + . ID=g12448.t1.exon2;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 3360 3488 . + 1 ID=cds.g12448.t1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 3661 3787 . + . ID=g12448.t1.exon3;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 3661 3787 . + 1 ID=cds.g12448.t1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 3951 4059 . + . ID=g12448.t1.exon4;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 3951 4059 . + 0 ID=cds.g12448.t1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 4185 4361 . + . ID=g12448.t1.exon5;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 4185 4361 . + 2 ID=cds.g12448.t1;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 4739 4959 . + . ID=g12448.t1.exon6;Parent=g12448.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 4739 4959 . + 2 ID=cds.g12448.t1;Parent=g12448.t1 #PROT g12448.t1 g12448 MVVVGLRWMRADFAHHPTMKALRSFRAPSWGSVAAGINREFRSFEKIMVGVGNTRLIVTENWILKCTAYRFDVAHQSDCDLSIVDSIQVRSQDASQRVDTDIQILSIQVTSANPAVRPFVVRIKASDYESLVDRLAVPVRNARRVIILQSVSDRFVAAIREIVRDNPVYRMRCAESDREAIESDSCVGCMAKKPDIKIHKTCGGSAHQCAECYCRPMWCLDCLTRWFASKQQQERPEEWLGGWSQCPTCRATFCAYDVCTMRWEFGESPSQTGAGL* # ORIGINAL: g12452.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 15324 17557 . - . ID=g12452;Name=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 15324 17557 . - . ID=g12452.t1;Parent=g12452;Name=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 17318 17557 . - . ID=g12452.t1.exon1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 17318 17557 . - 0 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 17035 17177 . - . ID=g12452.t1.exon2;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 17035 17177 . - 0 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 16795 16918 . - . ID=g12452.t1.exon3;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 16795 16918 . - 1 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 16463 16628 . - . ID=g12452.t1.exon4;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 16463 16628 . - 0 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 16173 16281 . - . ID=g12452.t1.exon5;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 16173 16281 . - 2 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 15803 15944 . - . ID=g12452.t1.exon6;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 15803 15944 . - 1 ID=cds.g12452.t1;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 15324 15434 . - . ID=g12452.t1.exon7;Parent=g12452.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 15324 15434 . - 0 ID=cds.g12452.t1;Parent=g12452.t1 #PROT g12452.t1 g12452 MAPSKQKKAAAAAPRQSGAVAIAKKDGNELIVYSRPEDAGDSDSEGSWNSEDEEIRQAVSTGLLGVDAPDAPQRQKINDKVALQAKFEEILLKEDGKTFPWAEKMQITSTEPLVVENVNDDFKREMAFYEQALAAVREARIRLEAAGIPIKRPDDYFAEMLKTDEHMKRVREKLASEKVSIEKSQEAKKLREMKKFGKTVQNKVLEDRMKQKKDDLEAIKKFRKDRSKDKPDFMEDDDGFGVGVEDDKGGRKRKADGEPQRNVKRSKKDQKYGFGGSKRHAKSNTTESAADDSGFNPFKNKQLPRGFKGGPGTQRGGKAGGGKAKPGKRPGKASRQKAKGRGKK* # ORIGINAL: g12451.t1 original gene structure, not modified by PASA NODE_594_length_20461_cov_41.0374 AUGUSTUS gene 14134 14943 . + . ID=g12451;Name=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS mRNA 14134 14943 . + . ID=g12451.t1;Parent=g12451;Name=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 14134 14250 . + . ID=g12451.t1.exon1;Parent=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 14134 14250 . + 0 ID=cds.g12451.t1;Parent=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 14342 14463 . + . ID=g12451.t1.exon2;Parent=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 14342 14463 . + 0 ID=cds.g12451.t1;Parent=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS exon 14586 14943 . + . ID=g12451.t1.exon3;Parent=g12451.t1 NODE_594_length_20461_cov_41.0374 AUGUSTUS CDS 14586 14943 . + 1 ID=cds.g12451.t1;Parent=g12451.t1 #PROT g12451.t1 g12451 MAGLLDDVFGDEVVSGGDGGHTHWHAKNEWRQLQDAHATAGYREGVASVRERKLQEGFDSGYAEGAKVGLAWGKLRGVLSMLKCRVPTVPLKDATSRSDFEAAITALLTDVLSMDDVRDLFPGDVIQGDIATKTDCGEKERCCGGGDCASSSSMTSSLCAPAPRPGANDGLTTLAIRARGVLIEYLRMDADQVHTLLH* # ORIGINAL: g12208.t1 original gene structure, not modified by PASA NODE_8779_length_355_cov_76.2607 AUGUSTUS gene 1 355 . - . ID=g12208;Name=g12208.t1 NODE_8779_length_355_cov_76.2607 AUGUSTUS mRNA 1 355 . - . ID=g12208.t1;Parent=g12208;Name=g12208.t1 NODE_8779_length_355_cov_76.2607 AUGUSTUS exon 1 355 . - . ID=g12208.t1.exon1;Parent=g12208.t1 NODE_8779_length_355_cov_76.2607 AUGUSTUS CDS 1 355 . - 1 ID=cds.g12208.t1;Parent=g12208.t1 #PROT g12208.t1 g12208 ALPLRRGHILRRQPRVQGHSVPSSRAHRRRLSPLQGAHIHSRLDSQPPPVVAAVGVRCRPHIRLLSVCIPLHVVPGVLSVPLQPHSRPSPMVCRVGHRRTRHHKDHKQSRQQRRAAAL # PASA_UPDATE: g10613.t1, single gene model update, valid-1, status:[pasa:asmbl_6341,status:12], valid-1 NODE_3639_length_3063_cov_98.5964 . gene 350 2007 . - . ID=g10613;Name=g10613.t1 NODE_3639_length_3063_cov_98.5964 . mRNA 350 2007 . - . ID=g10613.t1;Parent=g10613;Name=g10613.t1 NODE_3639_length_3063_cov_98.5964 . exon 1769 2007 . - . ID=g10613.t1.exon1;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . CDS 1769 2007 . - 0 ID=cds.g10613.t1;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . exon 1273 1645 . - . ID=g10613.t1.exon2;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . CDS 1273 1645 . - 1 ID=cds.g10613.t1;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . exon 1010 1137 . - . ID=g10613.t1.exon3;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . CDS 1010 1137 . - 0 ID=cds.g10613.t1;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . exon 350 776 . - . ID=g10613.t1.exon4;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . CDS 464 776 . - 1 ID=cds.g10613.t1;Parent=g10613.t1 NODE_3639_length_3063_cov_98.5964 . three_prime_UTR 350 463 . - . ID=g10613.t1.utr3p1;Parent=g10613.t1 #PROT g10613.t1 g10613 MHSLNAADSPVSTQVLFVGIVCLDVINTVSHYPTEDEQMRAVGQRRACGGNAANSSVVTKHCLGDDCALLTALGVGHDSTFVVSQLEAVGVDLSLCKTTDDVDVPNSHVIVNSATGSRTIIHHRALAELVLSDFPQPLILRRFDWVHFEGRNLSVTLEMMSEIRRYNDQLAVSGGPCSTRIVCSLELEKKTLKNYEPLLPFTDVLPDAILQSPFVAKVFVSKDFVRYNGCSTPAEGLPWFRSKLPKRGADACDAHGFELHCDPYPPDAVIDTLAAGDTFIAGFISTMRRELRETSLVASVDHASSDTDSLASPALRMGHVMLRHAVDYACRLAGAKVGVVGLSGLRAPPR* # PASA_UPDATE: g10614.t1, single gene model update, valid-1, status:[pasa:asmbl_6342,status:12], valid-1 NODE_3639_length_3063_cov_98.5964 . gene 2311 2818 . + . ID=g10614;Name=g10614.t1 NODE_3639_length_3063_cov_98.5964 . mRNA 2311 2818 . + . ID=g10614.t1;Parent=g10614;Name=g10614.t1 NODE_3639_length_3063_cov_98.5964 . five_prime_UTR 2311 2425 . + . ID=g10614.t1.utr5p1;Parent=g10614.t1 NODE_3639_length_3063_cov_98.5964 . exon 2311 2525 . + . ID=g10614.t1.exon1;Parent=g10614.t1 NODE_3639_length_3063_cov_98.5964 . CDS 2426 2525 . + 0 ID=cds.g10614.t1;Parent=g10614.t1 NODE_3639_length_3063_cov_98.5964 . exon 2667 2818 . + . ID=g10614.t1.exon2;Parent=g10614.t1 NODE_3639_length_3063_cov_98.5964 . CDS 2667 2818 . + 2 ID=cds.g10614.t1;Parent=g10614.t1;3_prime_partial=true #PROT g10614.t1 g10614 MASAFVRPGLPLFLRGTVVKGFGRGSKELGIPTANLPEETVEAMSELITTGIYFGFASVNRTVVQKMVMSVGWNPFYNNQKRSA # ORIGINAL: g987.t1 original gene structure, not modified by PASA NODE_2074_length_7849_cov_36.3315 AUGUSTUS gene 682 6496 . - . ID=g987;Name=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS mRNA 682 6496 . - . ID=g987.t1;Parent=g987;Name=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 6407 6496 . - . ID=g987.t1.exon1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 6407 6496 . - 0 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 6050 6121 . - . ID=g987.t1.exon2;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 6050 6121 . - 0 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 4719 5484 . - . ID=g987.t1.exon3;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 4719 5484 . - 0 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 4424 4558 . - . ID=g987.t1.exon4;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 4424 4558 . - 2 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 3848 4066 . - . ID=g987.t1.exon5;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 3848 4066 . - 2 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 3283 3447 . - . ID=g987.t1.exon6;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 3283 3447 . - 2 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 2679 3095 . - . ID=g987.t1.exon7;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 2679 3095 . - 2 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 1744 2290 . - . ID=g987.t1.exon8;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 1744 2290 . - 2 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 1412 1523 . - . ID=g987.t1.exon9;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 1412 1523 . - 1 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 933 1085 . - . ID=g987.t1.exon10;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 933 1085 . - 0 ID=cds.g987.t1;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS exon 682 726 . - . ID=g987.t1.exon11;Parent=g987.t1 NODE_2074_length_7849_cov_36.3315 AUGUSTUS CDS 682 726 . - 0 ID=cds.g987.t1;Parent=g987.t1 #PROT g987.t1 g987 MANRGEIAPRYRQFKLLMWKNWLFSLRNVKSTVLQLSAPLLFTVLVLGLLHIPQINRDKIHQETELPALLPRCIPWNGQPCKTLRWAPLTENTTAAVEQCMTNVIRRVVALNGLNLDADVERMKSGQELLTFYITYPNQTNNAIVFGSDVLSEAQDPTTWCSESAANPSLRYAILYNGTRALSFEQLNGFGPEKTDGRTQVQCAVDTAYMRIITGDETIELVPSYRNLPKIAPVRQSSASKESQLDTVFFYCGIMFQFVMMLYNLTVEKDLKLRQGLKIIGLKDSMYWLSWLVTGIAISTLAVLILMATGYACRLIYYTNTAFIVNFVLFMLFSLSLISFAFFMSNFVHTTRQAVNAGMLLFVVGLLFVSIVGNNFTMDALYDSHKTPPLLYKLFSFFPPFNLAKVMADVSSAASDTSSTGMPQVPHFYTWADTKTDRTFIVPDGNDSYWVHVPSTANSFALLIMNFFLYSILAWYLDNVKQGPHGIPRPFYFFLLPSYWSCAAPKVKGVRQPLLSGSTGGYYGNVGPHGNSGTTHASHDGLAPNSDPDVVAEREAAQRRTDVAFRISGFRRTFESGGCCCGLFNCCKACGGKKETLVAVEDLSLTAEEGTLLALLGHNGAGKSTTFNMLTGLLQPDAGDAFVFGRSVAAEMDAVRGIIGVCPQHDILWDELTAREHMNIFCRLKNVRDEELLQAIERGLSDVQLLDVADNRVGTYSGGMKRRLSVALSFVGDPRVVFLDEPTTGMDPYIRRDIWNLVLRMKKGRVIMMTSHSMEEADILGDKIAIMAKGRLQCVGSSIRLKNRFAGYTVSVVVRHGQENWLSDVMESRLGNAASETSRTQVEDGTLVMFTLPPSAVSRIVPLFKTLESAEAKQFVADCSVSQTTLEEVFIKVTEASLAAASTEHD* # ORIGINAL: g11713.t1 original gene structure, not modified by PASA NODE_2147_length_7506_cov_42.4647 AUGUSTUS gene 4061 5833 . + . ID=g11713;Name=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS mRNA 4061 5833 . + . ID=g11713.t1;Parent=g11713;Name=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 4061 4840 . + . ID=g11713.t1.exon1;Parent=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 4061 4840 . + 0 ID=cds.g11713.t1;Parent=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 5133 5332 . + . ID=g11713.t1.exon2;Parent=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 5133 5332 . + 0 ID=cds.g11713.t1;Parent=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 5515 5833 . + . ID=g11713.t1.exon3;Parent=g11713.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 5515 5833 . + 1 ID=cds.g11713.t1;Parent=g11713.t1 #PROT g11713.t1 g11713 MWPFPAHPRAGMTVTAQASAARRIESSFLVRVGELLLQTQPSLLATCRVAPVKAVRLRSPACRMHTVAASSGHRTPTLGSHPLGLHPHRLRQTGEGAPLRSFVRLMSTAASTASSAKARAVAPIRSMLGRITDYFDRMGPDGRKRFIAKGFGHIGFTASACSLAVVDMLHLRMLSMFSSGAFFIFNYAAGVTPNWVGIGWGVVFTIINLTQLSILALDRFSDELDEESAEVYKDVFQHYGITPGEFRRLYALAKWKDIATDQSLCSQNDELTELYLVVSGTAVVFHDGKPVGEVEQGQFVGEMVFLETREAATATVTATSPLKVLAWSHKDLRHLYQRRPLLARAWANLLSFDLAGKLANSNDERVSKTHTLYTNLVSSLLYDAKEVSEDDTKFLARFRKTNAIADDYHEKAVTAAGWTPSEYQTRKRSAQK* # PASA_UPDATE: g11714.t1, single gene model update, valid-1, status:[pasa:asmbl_3619,status:12], valid-1 NODE_2147_length_7506_cov_42.4647 . gene 6393 7346 . - . ID=g11714;Name=g11714.t1 NODE_2147_length_7506_cov_42.4647 . mRNA 6393 7346 . - . ID=g11714.t1;Parent=g11714;Name=g11714.t1 NODE_2147_length_7506_cov_42.4647 . exon 7227 7346 . - . ID=g11714.t1.exon1;Parent=g11714.t1 NODE_2147_length_7506_cov_42.4647 . CDS 7227 7346 . - 0 ID=cds.g11714.t1;Parent=g11714.t1 NODE_2147_length_7506_cov_42.4647 . exon 6393 7033 . - . ID=g11714.t1.exon2;Parent=g11714.t1 NODE_2147_length_7506_cov_42.4647 . CDS 6578 7033 . - 0 ID=cds.g11714.t1;Parent=g11714.t1 NODE_2147_length_7506_cov_42.4647 . three_prime_UTR 6393 6577 . - . ID=g11714.t1.utr3p1;Parent=g11714.t1 #PROT g11714.t1 g11714 MCSVLDVAAPTPPQAPDGALQYGYCVPDLQTFVADNALSVWIDGLVQIASPSTITINGMRAYPANAANNDILCKQPAAAQNPTTVPTFGSSAASPTGLCLQNDFAFFSSDGKMYLCRASKTALGTMECLSSIDGAVYTDVTSTLGANTPKPEHVSTAGNNTWGVSAAGIHRSSGGKWNLVAVLACDTTCRA* # ORIGINAL: g11712.t1 original gene structure, not modified by PASA NODE_2147_length_7506_cov_42.4647 AUGUSTUS gene 76 3042 . - . ID=g11712;Name=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS mRNA 76 3042 . - . ID=g11712.t1;Parent=g11712;Name=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 3019 3042 . - . ID=g11712.t1.exon1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 3019 3042 . - 0 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 2442 2758 . - . ID=g11712.t1.exon2;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 2442 2758 . - 0 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 2105 2287 . - . ID=g11712.t1.exon3;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 2105 2287 . - 1 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 1709 1851 . - . ID=g11712.t1.exon4;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 1709 1851 . - 1 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 1320 1369 . - . ID=g11712.t1.exon5;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 1320 1369 . - 2 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 989 1144 . - . ID=g11712.t1.exon6;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 989 1144 . - 0 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 689 822 . - . ID=g11712.t1.exon7;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 689 822 . - 0 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 321 494 . - . ID=g11712.t1.exon8;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 321 494 . - 1 ID=cds.g11712.t1;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS exon 76 185 . - . ID=g11712.t1.exon9;Parent=g11712.t1 NODE_2147_length_7506_cov_42.4647 AUGUSTUS CDS 76 185 . - 1 ID=cds.g11712.t1;Parent=g11712.t1 #PROT g11712.t1 g11712 MNHLGVAKARVLYPAAAAPSRPAISARPSAALAPVGVANGHAIPMSWVGLGPVDATTMAQFVMGTSVAGIPIANAHAHAHAAAPAMSVSSDMSTPPPSRKRAATQPVVLDKKERRRLRHNQFESKRREELGRCFDRLEAVLELQTKLVRDATKPFKNYLVLTAADIVESLAQENEALRATVADLERKVELFDPVGALLCDPPLFNSPPLVFGDDTDDIFRSLGIGKEDDILSRSYIGLVPHSGKLYMFDRVDPGYPAPVTGSKWPGVFTTGIDAAVLWSNNKTFFFSGDNYTDRVDSGAPKPISEAFPSLSFARIDGAVNWGNNKAYFFSAGYYIRYDIVADKQDDGYPRLIADGQWNEMLALCNGLSMGTVRWPVCWNNGRAYLFGRDGTYVRYDMANLKITKVSLQEWTSYQRIVQSKTDSQRGRSAA # PASA_UPDATE: g10235.t1, single gene model update, valid-1, status:[pasa:asmbl_7574,status:12], valid-1 NODE_4746_length_1279_cov_35.7035 . gene 242 1132 . + . ID=g10235;Name=g10235.t1 NODE_4746_length_1279_cov_35.7035 . mRNA 242 1132 . + . ID=g10235.t1;Parent=g10235;Name=g10235.t1 NODE_4746_length_1279_cov_35.7035 . five_prime_UTR 242 243 . + . ID=g10235.t1.utr5p1;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . exon 242 345 . + . ID=g10235.t1.exon1;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . CDS 244 345 . + 0 ID=cds.g10235.t1;Parent=g10235.t1;5_prime_partial=true NODE_4746_length_1279_cov_35.7035 . exon 462 590 . + . ID=g10235.t1.exon2;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . CDS 462 590 . + 0 ID=cds.g10235.t1;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . exon 848 1132 . + . ID=g10235.t1.exon3;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . CDS 848 973 . + 0 ID=cds.g10235.t1;Parent=g10235.t1 NODE_4746_length_1279_cov_35.7035 . three_prime_UTR 974 1132 . + . ID=g10235.t1.utr3p1;Parent=g10235.t1 #PROT g10235.t1 g10235 PALTPGNYDALVTAMAEHLSGGLEGAVFQTSFSQLGGLQLDKDLRTLSSYISGLTQRSVRDKFTRLTQIATLLVLEKVADTTEYWTTQISWRLTPMEVRRVLALRSDFRADDINRLKL* # ORIGINAL: g6691.t1 original gene structure, not modified by PASA NODE_1867_length_8827_cov_40.0479 AUGUSTUS gene 180 1202 . + . ID=g6691;Name=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS mRNA 180 1202 . + . ID=g6691.t1;Parent=g6691;Name=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS exon 180 581 . + . ID=g6691.t1.exon1;Parent=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS CDS 180 581 . + 0 ID=cds.g6691.t1;Parent=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS exon 700 879 . + . ID=g6691.t1.exon2;Parent=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS CDS 700 879 . + 0 ID=cds.g6691.t1;Parent=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS exon 1014 1202 . + . ID=g6691.t1.exon3;Parent=g6691.t1 NODE_1867_length_8827_cov_40.0479 AUGUSTUS CDS 1014 1202 . + 0 ID=cds.g6691.t1;Parent=g6691.t1 #PROT g6691.t1 g6691 IELDLMRTLPNNVHYSTPDGAGIGKLRRVLSAFSWHRPQVGYCQGMNLLAAILLLFMDEEEAFWGLVAIIEHIVSPDYYNQTLVASQADQRVLRELLVEKCPRLTAHMEAHGIDVTLITFNWFMTVFVDCVPPETLLRIWDTFLYEGHKVLFRYAIAILKMHERDMMGSQDNSTIFALLKSVARKMADADALSKMAFLDINPFPMAKIAAKRAHHMREVQGELAVLERDRAAYLKKKSAAAAAAAAASRGIDDDDD* # PASA_UPDATE: g6693.t1, single gene model update, valid-1, status:[pasa:asmbl_2849,status:12], valid-1 NODE_1867_length_8827_cov_40.0479 . gene 4895 6946 . + . ID=g6693;Name=g6693.t1 NODE_1867_length_8827_cov_40.0479 . mRNA 4895 6946 . + . ID=g6693.t1;Parent=g6693;Name=g6693.t1 NODE_1867_length_8827_cov_40.0479 . five_prime_UTR 4895 4932 . + . ID=g6693.t1.utr5p1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 4895 5406 . + . ID=g6693.t1.exon1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 4933 5406 . + 0 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 5503 5700 . + . ID=g6693.t1.exon2;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 5503 5700 . + 0 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 5789 5888 . + . ID=g6693.t1.exon3;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 5789 5888 . + 0 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 5973 6127 . + . ID=g6693.t1.exon4;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 5973 6127 . + 2 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 6361 6603 . + . ID=g6693.t1.exon5;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 6361 6603 . + 0 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . exon 6744 6946 . + . ID=g6693.t1.exon6;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . CDS 6744 6926 . + 0 ID=cds.g6693.t1;Parent=g6693.t1 NODE_1867_length_8827_cov_40.0479 . three_prime_UTR 6927 6946 . + . ID=g6693.t1.utr3p1;Parent=g6693.t1 #PROT g6693.t1 g6693 MSNCTNTNSAATSVAFISRWSQNPLDSLPLELGLRILAELDAADLCACARVCASWRTLAEHDALWQRHCATVGPPLTIVEYGLRQNGSRPRWKDVFRRRTTVRRNWNDARCMLYSISDRTDTAYAVRLDAEITVFGGFDRTVSVVSTADGSRLPPMAGHSGSIRCVEIGRAHVFSGGEDGQVIVWNKHDGSLVRRLLGHADHVVSLAALSPAALLSGSWDGTVKVWNVETGECIATIEHNGPVNAVCASGDVCAANWGEVVRVYRTLVDADGVTRFDFVHKLEGHSDEVASVQLTKDRIISGSWDKSVKVWSLSTGECLASLDGHTGVVWALRTVDDSWLVSGGWDGTMRLWSLNNHTCVHVFDEHECPISCLDANNCIIISCDEKGFVKCWDFAFSDSRTLRPADGYKFVRETGVLNKFTEVPPTGERSRRRSDRDANRDVPGMAHNIQ* # PASA_UPDATE: g6692.t1, single gene model update, valid-1, status:[pasa:asmbl_2850,status:12], valid-1 NODE_1867_length_8827_cov_40.0479 . gene 1315 4492 . - . ID=g6692;Name=g6692.t1 NODE_1867_length_8827_cov_40.0479 . mRNA 1315 4492 . - . ID=g6692.t1;Parent=g6692;Name=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 4337 4492 . - . ID=g6692.t1.exon1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 4337 4492 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 4106 4170 . - . ID=g6692.t1.exon2;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 4106 4170 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 3909 3987 . - . ID=g6692.t1.exon3;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 3909 3987 . - 1 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 3417 3767 . - . ID=g6692.t1.exon4;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 3417 3767 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 3225 3235 . - . ID=g6692.t1.exon5;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 3225 3235 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 2742 2872 . - . ID=g6692.t1.exon6;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 2742 2872 . - 1 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 2440 2549 . - . ID=g6692.t1.exon7;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 2440 2549 . - 2 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 2136 2273 . - . ID=g6692.t1.exon8;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 2136 2273 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 1777 1889 . - . ID=g6692.t1.exon9;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 1777 1889 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 1575 1677 . - . ID=g6692.t1.exon10;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 1575 1677 . - 1 ID=cds.g6692.t1;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . exon 1315 1377 . - . ID=g6692.t1.exon11;Parent=g6692.t1 NODE_1867_length_8827_cov_40.0479 . CDS 1315 1377 . - 0 ID=cds.g6692.t1;Parent=g6692.t1 #PROT g6692.t1 g6692 MGGSADDAHAAAHPTPEEAMRRLNALADHNLQLDAALPLRMWYRSARELHRMAGIYDKEGEAEKAYVLFMKFTMLILNVLPKHPDYGQPAFAKDKQETRKQCIAALDRLGVIKTALRERFSAEAEAHARTQRALKEAEERRAADAASRAAAMAASGVAAVASAATSKTAGLSLRPPPTQPTQPTQLTQPTLVTAPIAYATDRPTDVLGTATAEVCAQKPPSACRDARPAVDRALKPQVPDDLQAGPLAAPDARPQVDRTTKPAEGMRCVVIPQALVSRFVAIAASNTARNIETCGILAGTMRRNVLYVTALVIPCQEGTADSCSTTDEEGLFALQDAKDLITLGWIHTHPSQSCFMSSVDLHTHCSYQLMLSEAIAIVCSPKHDEVGTFSLTVPGGIELIARCRLSGFHPHPSEPVLYEQSGHVRYEAGLPLEVIDIRK* # PASA_UPDATE: g6694.t1, single gene model update, valid-1, status:[pasa:asmbl_2851,status:12], valid-1 NODE_1867_length_8827_cov_40.0479 . gene 6955 8727 . - . ID=g6694;Name=g6694.t1 NODE_1867_length_8827_cov_40.0479 . mRNA 6955 8727 . - . ID=g6694.t1;Parent=g6694;Name=g6694.t1 NODE_1867_length_8827_cov_40.0479 . five_prime_UTR 8696 8727 . - . ID=g6694.t1.utr5p1;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . exon 8501 8727 . - . ID=g6694.t1.exon1;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . CDS 8501 8695 . - 0 ID=cds.g6694.t1;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . exon 8100 8265 . - . ID=g6694.t1.exon2;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . CDS 8100 8265 . - 0 ID=cds.g6694.t1;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . exon 6955 7936 . - . ID=g6694.t1.exon3;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . CDS 7566 7936 . - 2 ID=cds.g6694.t1;Parent=g6694.t1 NODE_1867_length_8827_cov_40.0479 . three_prime_UTR 6955 7565 . - . ID=g6694.t1.utr3p1;Parent=g6694.t1 #PROT g6694.t1 g6694 MVLDLLGPSLEDLFNFCSRKFSLKTVLMLGEQMISRVEYVHSKHFIHRDIKPDNFLMGVARKCNQVYVIDFGLAKKYRDPKTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDLESLGYVMMYFNRGMLPWQGLKATTKKQKYDRISEKKMSTPVEVLCKSYPPEFATYLNYCRSLRFDETPDYGYLRQLLRDVFQRENLVYDYVFDWTLLKAQRQMAQQQQAGQDGGPSGAAAGASAAQ* # PASA_UPDATE: g5718.t1, single gene model update, valid-1, status:[pasa:asmbl_7045,status:12], valid-1 NODE_4160_length_2095_cov_30.5504 . gene 164 1972 . + . ID=g5718;Name=g5718.t1 NODE_4160_length_2095_cov_30.5504 . mRNA 164 1972 . + . ID=g5718.t1;Parent=g5718;Name=g5718.t1 NODE_4160_length_2095_cov_30.5504 . exon 164 259 . + . ID=g5718.t1.exon1;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . CDS 164 259 . + 0 ID=cds.g5718.t1;Parent=g5718.t1;5_prime_partial=true NODE_4160_length_2095_cov_30.5504 . exon 587 721 . + . ID=g5718.t1.exon2;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . CDS 587 721 . + 0 ID=cds.g5718.t1;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . exon 1045 1213 . + . ID=g5718.t1.exon3;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . CDS 1045 1213 . + 0 ID=cds.g5718.t1;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . exon 1437 1585 . + . ID=g5718.t1.exon4;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . CDS 1437 1585 . + 2 ID=cds.g5718.t1;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . exon 1862 1972 . + . ID=g5718.t1.exon5;Parent=g5718.t1 NODE_4160_length_2095_cov_30.5504 . CDS 1862 1972 . + 0 ID=cds.g5718.t1;Parent=g5718.t1;3_prime_partial=true #PROT g5718.t1 g5718 QTLRVRYDVSGSNWMAFQPNIIIDSNVGCIWEVFVDLTAIVTMVGDQCQLLDFLLRRTDGKAAILGLFKSAVDAHSQVPLATLSQMFDQVNAVYRGNAAVAGLPSAYNTSANASSLATKDAVSAGDRQAGSTAGAAALAIDASELLAALDLRNQHRIAGKGCIVVDQADMYKYVLEPMEEEHRPSNFGFVKSVLLEYIRSLNFFRIPVEHFLHQMMINLL # ORIGINAL: g12360.t1 original gene structure, not modified by PASA NODE_1485_length_10997_cov_39.6556 AUGUSTUS gene 7410 10409 . - . ID=g12360;Name=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS mRNA 7410 10409 . - . ID=g12360.t1;Parent=g12360;Name=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 10271 10409 . - . ID=g12360.t1.exon1;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 10271 10409 . - 0 ID=cds.g12360.t1;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 9893 10013 . - . ID=g12360.t1.exon2;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 9893 10013 . - 2 ID=cds.g12360.t1;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 9531 9597 . - . ID=g12360.t1.exon3;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 9531 9597 . - 1 ID=cds.g12360.t1;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 8614 9188 . - . ID=g12360.t1.exon4;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 8614 9188 . - 0 ID=cds.g12360.t1;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 7410 8187 . - . ID=g12360.t1.exon5;Parent=g12360.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 7410 8187 . - 1 ID=cds.g12360.t1;Parent=g12360.t1 #PROT g12360.t1 g12360 MAPITGYLGDRMNRVIFISISLALLAGASVATSFVTTYTQLVVVRLLSGFCEAGVYPLLPNMMSDLFSDKRRRYISGIMSVCYGLGGAIAFIIGNEICLQTGTWRWTYRISPGIFLLLAIFTHFYFEDPPRGLSDGVRVRSRNEESGTRAAKKDLSVIFSTRSFIWSTFGYTFLVFSMSSLFFWFPTLLMRCATVERNAGSFLITHAGTVVGICIAIGSTLGGAIGTVLAYCVASVDLGRRMQLATLAAFLMAASTTVGIMFVPTRTWGAVPFFVVACSAGFMAYGPIVSVLGVVVSAHRRATALAWRSLLGNILGDALGPLVVACVARDLFNDQGLSSIHSLSYALFAAVIASLIAAASLAYGLRYIQPDTEYIAQRQADENEWADHAHAHSQDPHNPATYGGSDFCPGALETERSNSSVAGTSLPSSLSGSQNTQQLHSAFPVLVGPESLDSNGDSRPHRAASIYVSTEAVQPRRSAYFTGSFKAGDKGRESPVSDTHSLDATRGRAGSADNVLVNGGDRARGHPDGSEEHLGSPSSPRGGSLGNHRLAVSRDRTLS* # ORIGINAL: g12359.t1 original gene structure, not modified by PASA NODE_1485_length_10997_cov_39.6556 AUGUSTUS gene 5753 6490 . + . ID=g12359;Name=g12359.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS mRNA 5753 6490 . + . ID=g12359.t1;Parent=g12359;Name=g12359.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 5753 6490 . + . ID=g12359.t1.exon1;Parent=g12359.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 5753 6490 . + 0 ID=cds.g12359.t1;Parent=g12359.t1 #PROT g12359.t1 g12359 MTTAMPAAKVMISLHEIVRLRLNAYLLANKAEIAEALDDPCLFMDPEKFQAEELIPRIAGTSSRKTVARRRMRRVLTPPKSSQQASTESEAVPATVGEDVETSSTARSSACVSGCDASAVIEKNGRRYAYAQDQFGMKHLQCPMCLDVFVKPTVTECDHTFCADCISHWISRMPSCPVDRQRVDYWTLKPATRLVRNQIDDLTVVCLHPECGEEMPKNAFEEHERVRHTDVRCDDDCESDGEGAE* # ORIGINAL: g12358.t1 original gene structure, not modified by PASA NODE_1485_length_10997_cov_39.6556 AUGUSTUS gene 1 3967 . - . ID=g12358;Name=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS mRNA 1 3967 . - . ID=g12358.t1;Parent=g12358;Name=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 2966 3967 . - . ID=g12358.t1.exon1;Parent=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 2966 3967 . - 0 ID=cds.g12358.t1;Parent=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 2608 2670 . - . ID=g12358.t1.exon2;Parent=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 2608 2670 . - 0 ID=cds.g12358.t1;Parent=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS exon 1 2248 . - . ID=g12358.t1.exon3;Parent=g12358.t1 NODE_1485_length_10997_cov_39.6556 AUGUSTUS CDS 1 2248 . - 0 ID=cds.g12358.t1;Parent=g12358.t1 #PROT g12358.t1 g12358 MGDRPVSPLPSASTGSSATPSVKSIAPPSSSTPVGTASVAAGSQKGKGLPSGNLFFENDELKSTVTQLRADLERERAKIKQLTKEKAAEAKKAKEDAQAELQRQEQDFKLRLANERLAAGASKMDARSGAVGGGIASGAVDKDKIIELLRKTVKAKEDELKILKEAKEEEVRALRDRCSQENTQRLTVERERDRLSKEGKELKKKVAQLTSELERVQGEHTANQHLQQHQHQQQQQQQPTATISDDAKGDAKGEDAKESAADMARKYMTREQRLVKEHERALRLKEKEIDEKVAAIKAAAAEQDKLAGEIERLKSSMALQLPSSFKRSTSRVEMAPESAVDATQKAQLEKECASLHASITTLTAQLSEARNTMAVVEEEAERRFHVLEAELSEALEDKASLIEQAAELSLRLEGAIARAVAAEDSLESHNENGRVDVATGADDVGAIDARRDGHVFTLDEMRHMHVVQERERMRCERELARQLCRYAALAERQKGAEDTCDQLLARLAEAASNAEELAHAAEDARAQLVAMQSGQSGLHGESYAPLPSPGRQNLASEITALKGDLDEAQAAIDRLTDENFRLQELLWQEVFLKSGKAKRADADDAVVTLSASVDKDAGSSPPSREPDVIAKVRGMVRESSLGLTALERALTLTRHDTFGARDSPVRQATVDQSEARDREQWEKVASTVDARAAESTSNASAAVAGNNGVAAADKVASSSSSRIESGASRHLSAELAEAASSEAQTADVSPTAADGVIADVAQAAADVTPTHADVNSSAATAPVPQQLAEDSSDAFDFGTPVEDQQKAASFIQSRFRARKQSASSASPSVAPAAVVVDAAPPAVNVGGEVGITTQVESLGDSVAADKSTNSEPAPALALAREEGEVESVVDGKDMLKVVDGTCVSESAVVAPAPTPAPVALAAPIEAEPFDFGTPIEEQQKAALFIQSRFKARFAKKAANTSQESPPSFASDGAGSVAHPVGARGTTQTTEKVSVDVAVAAAVAEEMREEEEGAVVQVLGVPSTTDTVRIASTAAAELYSEKVTSASSDSVQNSDAVSDSGAATATAATTSTASTAATAATASTAATAATAATASTAATAATAST # ORIGINAL: g3823.t1 original gene structure, not modified by PASA NODE_4590_length_1425_cov_31.8956 AUGUSTUS gene 104 1169 . - . ID=g3823;Name=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS mRNA 104 1169 . - . ID=g3823.t1;Parent=g3823;Name=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS exon 1107 1169 . - . ID=g3823.t1.exon1;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS CDS 1107 1169 . - 0 ID=cds.g3823.t1;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS exon 694 739 . - . ID=g3823.t1.exon2;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS CDS 694 739 . - 0 ID=cds.g3823.t1;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS exon 344 491 . - . ID=g3823.t1.exon3;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS CDS 344 491 . - 2 ID=cds.g3823.t1;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS exon 104 200 . - . ID=g3823.t1.exon4;Parent=g3823.t1 NODE_4590_length_1425_cov_31.8956 AUGUSTUS CDS 104 200 . - 1 ID=cds.g3823.t1;Parent=g3823.t1 #PROT g3823.t1 g3823 MEITATNEANTIFRGNSLVTKAFDAYLKLHGMGYLHSVLKPVLAAIMADAASCEVDGTRLDKAGDLDKNWKTLKSHVTATCDAIFKSINNCPAIFRQQFAHIRELVLTQFPQDPVIK* # ORIGINAL: g12741.t1 original gene structure, not modified by PASA NODE_6355_length_586_cov_38.0313 AUGUSTUS gene 170 401 . - . ID=g12741;Name=g12741.t1 NODE_6355_length_586_cov_38.0313 AUGUSTUS mRNA 170 401 . - . ID=g12741.t1;Parent=g12741;Name=g12741.t1 NODE_6355_length_586_cov_38.0313 AUGUSTUS exon 170 401 . - . ID=g12741.t1.exon1;Parent=g12741.t1 NODE_6355_length_586_cov_38.0313 AUGUSTUS CDS 170 401 . - 0 ID=cds.g12741.t1;Parent=g12741.t1 #PROT g12741.t1 g12741 MAKNDAGFLSLQKQCDKAAEILREFTMTSETTGPEKIIPATLILHAKGLAILTVIKAGFVITARGGQGIVICRMENG # PASA_UPDATE: g6959.t1, single gene model update, valid-1, status:[pasa:asmbl_8220,status:12], valid-1 NODE_5663_length_761_cov_77.1691 . gene 2 761 . - . ID=g6959;Name=g6959.t1 NODE_5663_length_761_cov_77.1691 . mRNA 2 761 . - . ID=g6959.t1;Parent=g6959;Name=g6959.t1 NODE_5663_length_761_cov_77.1691 . five_prime_UTR 761 761 . - . ID=g6959.t1.utr5p1;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . exon 554 761 . - . ID=g6959.t1.exon1;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . CDS 554 760 . - 0 ID=cds.g6959.t1;Parent=g6959.t1;5_prime_partial=true NODE_5663_length_761_cov_77.1691 . exon 308 448 . - . ID=g6959.t1.exon2;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . CDS 308 448 . - 0 ID=cds.g6959.t1;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . exon 2 165 . - . ID=g6959.t1.exon3;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . CDS 19 165 . - 0 ID=cds.g6959.t1;Parent=g6959.t1 NODE_5663_length_761_cov_77.1691 . three_prime_UTR 2 18 . - . ID=g6959.t1.utr3p1;Parent=g6959.t1 #PROT g6959.t1 g6959 CVHTLTTFNNNTHIQTESRAIVHYLESKYPNKGTNLLHLEDPKKFGQIEQWLNVEVSHYNPYTSGIVGELMFKPIFAPGAPVDQEKVQGLRNSLNASLDVYERHLAAGNEYLANNEFSFADLSHLPYGLYLVKAGHGDAFESRPHVKAWWDRITARASWVKASA* # PASA_UPDATE: g4285.t1, single gene model update, valid-1, status:[pasa:asmbl_6289,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 49852 50963 . - . ID=g4285;Name=g4285.t1 NODE_35_length_56163_cov_43.6556 . mRNA 49852 50963 . - . ID=g4285.t1;Parent=g4285;Name=g4285.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 50861 50963 . - . ID=g4285.t1.utr5p1;Parent=g4285.t1 NODE_35_length_56163_cov_43.6556 . exon 49852 50963 . - . ID=g4285.t1.exon1;Parent=g4285.t1 NODE_35_length_56163_cov_43.6556 . CDS 50396 50860 . - 0 ID=cds.g4285.t1;Parent=g4285.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 49852 50395 . - . ID=g4285.t1.utr3p1;Parent=g4285.t1 #PROT g4285.t1 g4285 MSAAAANAAAKTRVVATLRMMIPAGKASPSPPLGPALGQKGINIPQFCKEFNDRTKDYKPETPIGIFVTVKGDRSFSFVTKSPPNAFFLLRAAGIKFGAHKSKHERAGKLTLKHIYEIAVVKQKDPAFASMPLQALCKILIGSARSMGIEVIKK* # PASA_UPDATE: g4276.t1, single gene model update, valid-1, status:[pasa:asmbl_6277,status:3], valid-1 NODE_35_length_56163_cov_43.6556 . gene 17973 19599 . - . ID=g4276;Name=g4276.t1 NODE_35_length_56163_cov_43.6556 . mRNA 17973 19599 . - . ID=g4276.t1;Parent=g4276;Name=g4276.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 19550 19599 . - . ID=g4276.t1.utr5p1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . exon 19390 19599 . - . ID=g4276.t1.exon1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . CDS 19390 19549 . - 0 ID=cds.g4276.t1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . exon 19153 19295 . - . ID=g4276.t1.exon2;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . CDS 19153 19295 . - 2 ID=cds.g4276.t1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . exon 18870 19067 . - . ID=g4276.t1.exon3;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . CDS 18870 19067 . - 0 ID=cds.g4276.t1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . exon 18571 18732 . - . ID=g4276.t1.exon4;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . CDS 18571 18732 . - 0 ID=cds.g4276.t1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . exon 17973 18467 . - . ID=g4276.t1.exon5;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . CDS 17988 18467 . - 0 ID=cds.g4276.t1;Parent=g4276.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 17973 17987 . - . ID=g4276.t1.utr3p1;Parent=g4276.t1 #PROT g4276.t1 g4276 MSSLDHGGSEAHVPLGNEAFPALTNDTILRAARGQPTEYVPVWAMRQAGRYLPEFRQQRVLADFFTVCRTPSLACEVTLQPLRRFELDAAIIFSDILVIPQALGMEVEMLPGKGPHFPKPLDTVADLEVIPRALAAKDKLQYVFDAITLTRHKLEGKVPLIGFCGAPWTLMAYMIEGGGSKTFSKAKSWLYDRETASLDLLDRITAASIDYLVGQVAAGAQMLQVFESWAGELGPDLFSTYSLPFLRRIRSGVHERLVQLGIPTVPMVVFAKGAHYAIPDLAQSGYNVVGLDWTVDPRTARAAAGDAVSLQGNMDPCALYGSHDRIGREVRTMIDGFGTQRYIANLGHGMHPDHDPAALGAFVDEVHRYSTELNGSRATQ* # ORIGINAL: g4282.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 41964 43133 . - . ID=g4282;Name=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 41964 43133 . - . ID=g4282.t1;Parent=g4282;Name=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 42905 43133 . - . ID=g4282.t1.exon1;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 42905 43133 . - 0 ID=cds.g4282.t1;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 42643 42756 . - . ID=g4282.t1.exon2;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 42643 42756 . - 2 ID=cds.g4282.t1;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 42428 42496 . - . ID=g4282.t1.exon3;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 42428 42496 . - 2 ID=cds.g4282.t1;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 41964 42100 . - . ID=g4282.t1.exon4;Parent=g4282.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 41964 42100 . - 2 ID=cds.g4282.t1;Parent=g4282.t1 #PROT g4282.t1 g4282 MGCRSSRVAHEPGKNVPRGYGEATAGAPLPLQFGFLHHLLQAHPQDNEGATADGRMPGDSDTHHHQHEGGAADQLGVDSTPFVVCPVCDAKLEDSSALDAHLDKCMRRAAIGYNTETLQIDLPGEIECQICLEEFTTGQVVARLGCLCMFHKRCVDGWFRKSRSCPSHPDVWKSIARDPHPG* # PASA_UPDATE: g4271.t1, single gene model update, valid-1, status:[pasa:asmbl_6275,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 6977 10022 . - . ID=g4271;Name=g4271.t1 NODE_35_length_56163_cov_43.6556 . mRNA 6977 10022 . - . ID=g4271.t1;Parent=g4271;Name=g4271.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 9957 10022 . - . ID=g4271.t1.utr5p1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 9845 10022 . - . ID=g4271.t1.exon1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 9845 9956 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 9623 9721 . - . ID=g4271.t1.exon2;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 9623 9721 . - 2 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 9016 9518 . - . ID=g4271.t1.exon3;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 9016 9518 . - 2 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 8684 8890 . - . ID=g4271.t1.exon4;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 8684 8890 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 8428 8595 . - . ID=g4271.t1.exon5;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 8428 8595 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 8266 8339 . - . ID=g4271.t1.exon6;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 8266 8339 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 8096 8180 . - . ID=g4271.t1.exon7;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 8096 8180 . - 1 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 7626 8010 . - . ID=g4271.t1.exon8;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 7626 8010 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 7459 7535 . - . ID=g4271.t1.exon9;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 7459 7535 . - 2 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 7227 7373 . - . ID=g4271.t1.exon10;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 7227 7373 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . exon 6977 7128 . - . ID=g4271.t1.exon11;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . CDS 6994 7128 . - 0 ID=cds.g4271.t1;Parent=g4271.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 6977 6993 . - . ID=g4271.t1.utr3p1;Parent=g4271.t1 #PROT g4271.t1 g4271 MKVSAANDVKIYNVSAGKTLPEWLSDRKKRSMQKDDVELMRRIQLIQDFSMPTASSRIKMTRDGNYILAAGTYKPRIRCYEVAELGMKFERFLTADVVQFEVLSDDYSKLALLHSDRSIEFHAQYGGYYKTRIPKFGRDMQYHFPSCDLFVVGASHEVYRLNLEQGRFLAPFVTKGPECNVIVQNTQFDMLAIGTTAGIVECWDPRSRACVGSVDAGAGLLASSEFSSLLDGAIPEITSVRFDGDGLTMAVGTSTGHVLVYDVRARAPLRIKDHQYGFPIRDIRFHEASRQVVSADAKAVKIWDKDSGKNLTSIEPPADINELCLVGSSGLFFVASEDPAIQTFYVPALGPAPRWCAFLDNLTEELEETTQGQVYDDYKFVTRKELDELGLSHLVGTNVLRAYMHGFFMDIRLYQEAKAISEPFAYKEYRQEKLRKKIEETRENRIRLQRKLPKVNAQLAKRLLDNEVETGEPAAGPNPLQDQRFGALFTNPDFQVDVDSHEFRLLHPSSSNKSKKAGSVLSNFEPVNEDEEESGSEDDGEETGDITDKKRSAASAKSGPAKKPKFFEVRDTSLGSMSKKSQRASFGERLRSAPVDESSRVERGAAGGKELTFQIGSSKLRGRENGGGSQAERHHRENQRGVRELKLKKKGGPVFWRGKIVKK* # PASA_UPDATE: g4269.t1, single gene model update, valid-1, status:[pasa:asmbl_6274,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 2659 5194 . - . ID=g4269;Name=g4269.t1 NODE_35_length_56163_cov_43.6556 . mRNA 2659 5194 . - . ID=g4269.t1;Parent=g4269;Name=g4269.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 5165 5194 . - . ID=g4269.t1.utr5p1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . exon 4233 5194 . - . ID=g4269.t1.exon1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . CDS 4233 5164 . - 0 ID=cds.g4269.t1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . exon 3972 4140 . - . ID=g4269.t1.exon2;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . CDS 3972 4140 . - 1 ID=cds.g4269.t1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . exon 3339 3852 . - . ID=g4269.t1.exon3;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . CDS 3339 3852 . - 0 ID=cds.g4269.t1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . exon 2659 3215 . - . ID=g4269.t1.exon4;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . CDS 3091 3215 . - 2 ID=cds.g4269.t1;Parent=g4269.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 2659 3090 . - . ID=g4269.t1.utr3p1;Parent=g4269.t1 #PROT g4269.t1 g4269 MGLIVLGTEVGGAAADHGRAGLAAADDAEYLYDDSHAEDSRPLLSESSSAMGHESAPTRTQGAIERLCAPEATELSADHCGVVSERSNGDGIDADGDGSDGGGLRRTIGLWSGASLIVGLVIGSGIFASPGSVVRSTMSVGMTLVVWIFAGFLALGGALCYAELGTAIPRSGAEYAYLDRAYGPAVSFQFTWTNVFIVRPGSQAIISLVFAQYLAAVFLTDPGVVVVKALGSVCIAVICTVNCFGVKHGTRLQNVLTGAKVTAIAFVVILGVIALARGETDSFHSPFSGMAQSPSNYGVAVVSCLWAYDGWNNMNYVTEELVDVTRSLPRGIGIAMSVVMTCYVAINIAYFAVLPIDVVASSTAVATEVGRRMIGRAGAVVIPLCVAASAFGACNGTAFTGARIVHVSARDGQLPAVLGRIDPRRSTPINALVFQAAASVVLVIVGNFDALVNFFSLAAWTFYALTAMSLLVLRVREPALPRPYRAPFFVAPLFICVAIALLVSILVDSPSESAISAGIMLAGIPVWAIFVRNGGSIAARWRMQLCACRPWARSGDYNKFVGVEDSLPLDVVQESKDSS* # ORIGINAL: g4288.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 55414 56163 . - . ID=g4288;Name=g4288.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 55414 56163 . - . ID=g4288.t1;Parent=g4288;Name=g4288.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 55930 56163 . - . ID=g4288.t1.exon1;Parent=g4288.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 55930 56163 . - 1 ID=cds.g4288.t1;Parent=g4288.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 55414 55627 . - . ID=g4288.t1.exon2;Parent=g4288.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 55414 55627 . - 1 ID=cds.g4288.t1;Parent=g4288.t1 #PROT g4288.t1 g4288 PLLLPPSLPSLSLLLCAGFDIRIPPTVDLDLFKQQLDAWTDIPGVSYEFVNKFENNKMTVLDDNNPWWLAFRAACDGIGAKIEARIFPAATDSRFLRQKGIPAFGFSPINHSPILLHDNDEYLHESIFLRGIDVYCVIIPAIADVVQS* # PASA_UPDATE: g4275.t1, single gene model update, valid-1, status:[pasa:asmbl_6282,status:3], valid-1 NODE_35_length_56163_cov_43.6556 . gene 16047 17965 . + . ID=g4275;Name=g4275.t1 NODE_35_length_56163_cov_43.6556 . mRNA 16047 17965 . + . ID=g4275.t1;Parent=g4275;Name=g4275.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 16047 16207 . + . ID=g4275.t1.utr5p1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . exon 16047 16338 . + . ID=g4275.t1.exon1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . CDS 16208 16338 . + 0 ID=cds.g4275.t1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . exon 16446 16472 . + . ID=g4275.t1.exon2;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . CDS 16446 16472 . + 1 ID=cds.g4275.t1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . exon 16588 16772 . + . ID=g4275.t1.exon3;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . CDS 16588 16772 . + 1 ID=cds.g4275.t1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . exon 16901 16959 . + . ID=g4275.t1.exon4;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . CDS 16901 16959 . + 2 ID=cds.g4275.t1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . exon 17050 17965 . + . ID=g4275.t1.exon5;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . CDS 17050 17865 . + 0 ID=cds.g4275.t1;Parent=g4275.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 17866 17965 . + . ID=g4275.t1.utr3p1;Parent=g4275.t1 #PROT g4275.t1 g4275 MADMEAGEVLSSPSVEFLPIPEQRLGQDIEITFVLRDEPDLKAWIGVFAQHENTASYAGFTYVSCTTVLGPHKRVAHISSTKLNQGMYLAKYLTTNSYRKTTIHAVSAPFEMTSGLQCVDDDDFDITLVQPEEEATGDLPTAVTQSLSIKSDAGGWTQLPAVHGQQQAEASVQVAVACAACVEKDAHIVRLETRVADLQAALWEADARAARVTTELTVTDELRVELDSTYQRLGEYQATQLALEDRLYSQTEVHASLVARLEAAEAARASISAMADALRADLKVSRRETEEVRALASARLADCEAVTRRLARVTTELEMERAARQTQAQAQTQREPSALVAGGAVTFDCPVCARRLSAASRRAQNEHIEACLSAPPGKHRCPVCRDEFPEHMFEQFAQHVDAHLS* # ORIGINAL: g4283.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 43726 46416 . - . ID=g4283;Name=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 43726 46416 . - . ID=g4283.t1;Parent=g4283;Name=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 45937 46416 . - . ID=g4283.t1.exon1;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 45937 46416 . - 0 ID=cds.g4283.t1;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 44197 45747 . - . ID=g4283.t1.exon2;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 44197 45747 . - 0 ID=cds.g4283.t1;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 44002 44070 . - . ID=g4283.t1.exon3;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 44002 44070 . - 0 ID=cds.g4283.t1;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 43726 43878 . - . ID=g4283.t1.exon4;Parent=g4283.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 43726 43878 . - 0 ID=cds.g4283.t1;Parent=g4283.t1 #PROT g4283.t1 g4283 MSDEDGVAHGRPVGSVSWGMASSHSRSVSLSGHGVTIEMTTDVASGADHSVINGLDPAISRSHNRNAQESFLESDLSLNRVDGGQLQYRFSRFRVDAAPASSVHTPTEYEIDGGSSSLDATSWQGIIGNALRPEMSRPSFKTGPDTSKPSLRYDWQHPGWGSVTNIDLSGVPPLPKKPKTNLGQWRATSIAGNDVMASVLYTIGLTLTTAGPLAPLCLVLVCVFILPVLRVISELALAMPYNGGLYSFFLNTSSKFLATIVACLSLLCYISTAVVSGASASEYLGGEISSINTFWLTIGIFCAFAGLCIFGVKESSLIAMSIFFLHLITLAILVVAGVVFVIRDGGDILKANYAASQFENPAYKVFFGFCVAMLAGTGFETTANYVEETGPGVFTKIIRNMWGLLVLFDPALALLALGSVPFDVIVANPSTTLSVMGEACAGKWLRWLVAVDAFVVLCGGVLTAFVGVIGLIERMTYDRCLPSFLANRNRFFHSNHWIILSFLGLCCGLYAIVNGDVTSLAGVFTLAFLSVLTSFTVAGLYARYKRPRLPRVVVTSGYFLGIGLVAMSAALIGNIYLDPQMLSYFFLFYLIPLGVVTLTLNKVRIYKLIMHLFHRSKELHKYGDVFVEKVKRSKQHSVGFLTATDEIHILNRAVLYTTANEFCNRIKLIHVYEKPEEVPKFLTENHYILDHVYPKIQIDLILVKGGFTPDTIEHLAEKLNIPVSFLFMRSPGPSFPYTYGQLHGVRLILP* # ORIGINAL: g4272.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 10318 12220 . + . ID=g4272;Name=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 10318 12220 . + . ID=g4272.t1;Parent=g4272;Name=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 10318 10350 . + . ID=g4272.t1.exon1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 10318 10350 . + 0 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 10666 10821 . + . ID=g4272.t1.exon2;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 10666 10821 . + 0 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 10925 10988 . + . ID=g4272.t1.exon3;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 10925 10988 . + 0 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 11118 11260 . + . ID=g4272.t1.exon4;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 11118 11260 . + 2 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 11365 11452 . + . ID=g4272.t1.exon5;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 11365 11452 . + 0 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 11550 11665 . + . ID=g4272.t1.exon6;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 11550 11665 . + 2 ID=cds.g4272.t1;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 11936 12220 . + . ID=g4272.t1.exon7;Parent=g4272.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 11936 12220 . + 0 ID=cds.g4272.t1;Parent=g4272.t1 #PROT g4272.t1 g4272 MSEAKQDAPRAEMLKDEVRTTSYRRAIIQNKHIFKDKIVLDVGCGTGILCMFAAQAGAKTVIGIDCSNIINQAREIVKANGFEAVITLIQGKVEEVELPVPKVDIIISEWMGYCLLYESMLDTVLFARDKWLVPGGRIYPDQANLYICGIEDGDYKDEKINWWDDVYGFDMSCIRKLAMKEPLVDTVDPNQVATDVCLIKPCVTMTEDVREALNIGVIAIFGFNFAAPEAKYTHWKQTVFYLEDALTVRPGEVLSGEFKCVPNDKNPRDLDITLKYDFDGEITKARNTQDYRMR* # PASA_UPDATE: g4268.t1, single gene model update, valid-1, status:[pasa:asmbl_6278,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 986 3308 . + . ID=g4268;Name=g4268.t1 NODE_35_length_56163_cov_43.6556 . mRNA 986 3308 . + . ID=g4268.t1;Parent=g4268;Name=g4268.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 986 1026 . + . ID=g4268.t1.utr5p1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 986 1486 . + . ID=g4268.t1.exon1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 1027 1486 . + 0 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 1596 1697 . + . ID=g4268.t1.exon2;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 1596 1697 . + 2 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 1818 1925 . + . ID=g4268.t1.exon3;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 1818 1925 . + 2 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 2010 2235 . + . ID=g4268.t1.exon4;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 2010 2235 . + 2 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 2367 2505 . + . ID=g4268.t1.exon5;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 2367 2505 . + 1 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 2604 2756 . + . ID=g4268.t1.exon6;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 2604 2756 . + 0 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . exon 2846 3308 . + . ID=g4268.t1.exon7;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . CDS 2846 3085 . + 0 ID=cds.g4268.t1;Parent=g4268.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 3086 3308 . + . ID=g4268.t1.utr3p1;Parent=g4268.t1 #PROT g4268.t1 g4268 MDALAGYGSDAASDTDDTDANARDPRNCLIIQPQVDVLRYSDLTEIPAKRRKIGTSEASLTVAVQSDWHEPQCVDGHPAPRHSIPRVTNASSRDRPEERAVGRQTRAVCGRYVPKRERHSSPTSQTGGHAPGGTRGHATTAQPTPPLNTLAVIEAPEQRGSTCPSRLKTKLMGHTNHVTCVRWSPGSGSTLASCSLDGSVRLWGNPWSGLAHNSQARAAIACGAPVREGQWRGDGEVFVTASYDGCVREISAGRSEGSPLFSRPGCTATTVRYHPEQPAVVLAGFSSGEIVAWDVRSNESIREFKGAFGLVQDVEFLSATEFASCSDVARRNSTDKGILVWDFASGAIMSNQVFQEAFTCTTLRRHPAGNTFIAQCNADYIALFSASRPYKLDKRKRYESHVVGGRRIGCGFSPDGRLVCTGSADGRLVVYDGRSARVLATISAHEGVTSDCAFHPTRASAVATAGWDGAVAVWE* # PASA_UPDATE: g4280.t1, single gene model update, valid-1, status:[pasa:asmbl_6285,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 34715 36430 . + . ID=g4280;Name=g4280.t1 NODE_35_length_56163_cov_43.6556 . mRNA 34715 36430 . + . ID=g4280.t1;Parent=g4280;Name=g4280.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 34715 34775 . + . ID=g4280.t1.utr5p1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . exon 34715 34860 . + . ID=g4280.t1.exon1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . CDS 34776 34860 . + 0 ID=cds.g4280.t1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . exon 35169 35327 . + . ID=g4280.t1.exon2;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . CDS 35169 35327 . + 2 ID=cds.g4280.t1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . exon 35576 35606 . + . ID=g4280.t1.exon3;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . CDS 35576 35606 . + 2 ID=cds.g4280.t1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . exon 35729 36430 . + . ID=g4280.t1.exon4;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . CDS 35729 35975 . + 1 ID=cds.g4280.t1;Parent=g4280.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 35976 36430 . + . ID=g4280.t1.utr3p1;Parent=g4280.t1 #PROT g4280.t1 g4280 MTSNAEYYCPVYSSFFGVMGATSAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSVIPVVMAGIIAIYGLVVAVLIANGFSTPKTYSLFKGFIDLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPKLFVGMILILIFAEVLGLYGLIVALILNTNGNSASSLCNNGTSS* # PASA_UPDATE: g4274.t1, single gene model update, valid-1, status:[pasa:asmbl_6276,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 13633 15826 . - . ID=g4274;Name=g4274.t1 NODE_35_length_56163_cov_43.6556 . mRNA 13633 15826 . - . ID=g4274.t1;Parent=g4274;Name=g4274.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 15667 15826 . - . ID=g4274.t1.utr5p1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 15602 15826 . - . ID=g4274.t1.exon1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 15602 15666 . - 0 ID=cds.g4274.t1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 15452 15510 . - . ID=g4274.t1.exon2;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 15452 15510 . - 1 ID=cds.g4274.t1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 15185 15322 . - . ID=g4274.t1.exon3;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 15185 15322 . - 2 ID=cds.g4274.t1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 14913 15088 . - . ID=g4274.t1.exon4;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 14913 15088 . - 2 ID=cds.g4274.t1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 14629 14796 . - . ID=g4274.t1.exon5;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 14629 14796 . - 0 ID=cds.g4274.t1;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . exon 13633 14514 . - . ID=g4274.t1.exon6;Parent=g4274.t1 NODE_35_length_56163_cov_43.6556 . CDS 13633 14514 . - 0 ID=cds.g4274.t1;Parent=g4274.t1 #PROT g4274.t1 g4274 MSQATQEFSQTQETFVCSGADRVEVQSWGRLISLNDRVRNYELIKDEYIVGRNGDCDVVIEMSAISGKHCRIYRDEQGVFIVDHSTNGTFINGQKLLKGDRNPLGREDIISFAAKKQHAFVFQDTIPTTDCAALDSQYILLRQLGAGACGVVHLAVHKVTGVKYAVKIVQKNSLTGRAKNDIMSEALILKSIDHPFIISMHEVFESPIKVYFVLEYANGGEVFNKIQESGPFPDHEAKYLFAQMLLGVQYLHDKGIAHRDLKPENVLLSVINRRSIIKITDFGLAKLVEVTMRTMCGTLTYLAPEVLKNGGHRDRYTSAVDCWSLGVILFVFLSGTTPFNETPTSLPITEQIIRGMYHFDPSLWRSVSPLAVDLIRRLLVLDPRKRATVDDALAHEWIRDEAQRIRGELLAPPADTSASLMPPPTALPSQRQSNPQQHQPTRAAVPDDVTPKNDSTDDGGESSFATTCAANAVAGADVDDGPPAKRARLVVKVAP* # ORIGINAL: g4286.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 51280 53501 . + . ID=g4286;Name=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 51280 53501 . + . ID=g4286.t1;Parent=g4286;Name=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 51280 51531 . + . ID=g4286.t1.exon1;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 51280 51531 . + 0 ID=cds.g4286.t1;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 51663 52344 . + . ID=g4286.t1.exon2;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 51663 52344 . + 0 ID=cds.g4286.t1;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 52609 52934 . + . ID=g4286.t1.exon3;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 52609 52934 . + 2 ID=cds.g4286.t1;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 53145 53501 . + . ID=g4286.t1.exon4;Parent=g4286.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 53145 53501 . + 0 ID=cds.g4286.t1;Parent=g4286.t1 #PROT g4286.t1 g4286 MVAFVVVAAAMATTGVAAFVLRDSIRRHLNAFAHKHPALHILTVLIPLNVALSLAVSCRNGTIRLITGRHPLSHERRVQNVQRQVLDWNRTGKKGMMCTLRSRNGVLGALGARLPRYKRVLLNVHLSMDDVLSIDYETKIARVEPMLLVADLVSILLKNGHSLSVAPETADITVGGAILGAGFDASSGRSGFFHSACLAYEVIMPDGRLVRATATDNPELFACIPMSHGSLGVLVAVELKIAPVPAYVHLEYIPMKTRVDLVKLFAHEAMRSATADGPLFVEAFVYGDTEGVVVTGEEMGDDVSTDPIHAIGHFYAPWFYEHARSHIATGRSSEIVYRTHFHGRHRRSRLFEAADTVPFGNSLAFRLALGWTAPIDPRVVGLLRTDAAHLQRTETHIAQTYVVPITELAVVLDAIDKELKVHPLWLCPVRVPSESSRDALVQPRGGAGGDEMHAVITVWGRPAAETYRRRESLRAVASVVRACGGFQLVCGDSAVVESKAELTANLNTRTFDRTRDKTGCFGAFPDPFDKMCMAAKAD* # ORIGINAL: g4273.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 13034 13545 . + . ID=g4273;Name=g4273.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 13034 13545 . + . ID=g4273.t1;Parent=g4273;Name=g4273.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 13034 13054 . + . ID=g4273.t1.exon1;Parent=g4273.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 13034 13054 . + 0 ID=cds.g4273.t1;Parent=g4273.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 13141 13545 . + . ID=g4273.t1.exon2;Parent=g4273.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 13141 13545 . + 0 ID=cds.g4273.t1;Parent=g4273.t1 #PROT g4273.t1 g4273 MLEAETETPHIPPGMAPEVVDQQQQMTKAQKKNEKRKQRRKEDASERDVGAADGDAVAAALSTTHIDTGSTTQATTLASATETGNVAADPAKEIKALAKKLRQIDDLERRLVGSVKPTKEEAEKISKKDEIRARLAELEGR* # ORIGINAL: g4267.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 224 377 . - . ID=g4267;Name=g4267.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 224 377 . - . ID=g4267.t1;Parent=g4267;Name=g4267.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 224 377 . - . ID=g4267.t1.exon1;Parent=g4267.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 224 377 . - 0 ID=cds.g4267.t1;Parent=g4267.t1 #PROT g4267.t1 g4267 MHRSRVRFLTRLAMRVSVVACASMAAYVAFLAIAGLDPPGGSGRANGAGGV # PASA_UPDATE: g4278.t1, single gene model update, valid-1, status:[pasa:asmbl_6288,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 22972 32330 . + . ID=g4278;Name=g4278.t1 NODE_35_length_56163_cov_43.6556 . mRNA 22972 32330 . + . ID=g4278.t1;Parent=g4278;Name=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 22972 23190 . + . ID=g4278.t1.exon1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 22972 23190 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 23520 23858 . + . ID=g4278.t1.exon2;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 23520 23858 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 24014 24106 . + . ID=g4278.t1.exon3;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 24014 24106 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 24318 24376 . + . ID=g4278.t1.exon4;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 24318 24376 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 24483 24780 . + . ID=g4278.t1.exon5;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 24483 24780 . + 1 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 24920 30117 . + . ID=g4278.t1.exon6;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 24920 30117 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 30267 30525 . + . ID=g4278.t1.exon7;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 30267 30525 . + 1 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 30708 30975 . + . ID=g4278.t1.exon8;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 30708 30975 . + 0 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 31102 31261 . + . ID=g4278.t1.exon9;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 31102 31261 . + 2 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . exon 31406 32330 . + . ID=g4278.t1.exon10;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . CDS 31406 32174 . + 1 ID=cds.g4278.t1;Parent=g4278.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 32175 32330 . + . ID=g4278.t1.utr3p1;Parent=g4278.t1 #PROT g4278.t1 g4278 MSQHGASPSLSASRRVSRAGSLVQVVAQTASTARPSQQAQPQDGADQHGLIPLVLAVERNEPSPLLLEPLFDLMAEGKFDIQRNFTIAHPPALLLILEFMSRCPVALQAEIWNTLTVAFSKSLDNLETAMRLSLFERLLGLACATVDELIVGKIFQALEVLGRYSVSVRDLRLILRHVRSDERGLRPRSALRLLELLRSILFKEGPIAYFHFTGKDSGIIMPPLQRWPQQPGYTIHIYAACVDTMATWNHLDSFRNDRGHGYSAFLSGARLIIEVTGTGARQPARHTLSTAFQVRRWYMLTIVHSLSRLSKASEIACYVNGKADSRAELKFSSATERLNKCFIATAPASPGVTTDLHGQIASIYGFADALGAPTIEALWRLGIDHRHCFVDASEATVPLSPGDRRLLFESRLNSNIMFAFNPRACDGSSTSAVPNCAPAMIAAHFTGITPAAMLSGGRTVVTRCARDGIVAIGGVVGLLPLFSQLDHPRLVSGVTVHAADPALSASVLGLVSEVLMRCSFSQRQMIDARGFVVVGFLLEQVSPAHLGHRALDAILGAARQLREQADAGVEDAATLLAQLLEHVLFNAALWIYAETSVQSRLWSALATEFVRLECVDVRRVVGVTRLLDALRRYYWLREDSHSLAVRPVKHPVTGAVVSMRPSVEDVRSLRAYVLLAVRQMTSRGKDGDAMTVEEVSAVLSYIAVCRDVDEHVIDVCDLLLAVMCERPEPVIAHFDTLGGLRSAVLLLESRSQFVRLYGVRLIGRLVGWLGPRRAERVAAQCDLYALMSRRLSLCADRLDHATYAALYECATGTVTRAAMNTDRRTQLPPDTHDHVLFPGFMRTAIDLLALGGHSRRDRAVAQQVVTDVLQLVALDEDNRRAFLGCDGWQLWVSYLLACASVPAAVGERERTCSSVSVEARSRAPTPDIVYSDPAMPQRPPSDTLQRPEDEDDGGRMAGNVYTIMRILLYHAMKMDKDGWRVWEATIATVRTYFVGAWSSLGRPQGHESAENLAIPQDGDGPRSNSRSACSDDDLRGASDANDVPSNSTAATEDNAIPTPLVARWPSAEAVQERLVDDILAALEADVKLWRSHPKRTVADFVVLRENAVFVTNAVCVLSVMAEDLLSDCNGFSVLREVYDSFGQRTTGLDELGGVAARSSLPLSSPSSLQSLSVAAVDSAPPSAAAGGVAPVAFAHVLRVLMLMDAIVFATGIDLGAIEQAREMAPGGLLRQCLRLIIFASRAALVAERSRTSLGGRDFDPTPESLGALREGVETVSRALGDTSARLKEYLTRRIEEWRQEMVSARRLVGEQDLNRLRAVLYRHADEKAKSAHALMLAIVFFLSATIVEEYKQLLFLRKRSGSLAFQAVPATQPSAVVSPLEAALEESAGLVVRLMRDVIRDFRGPLSKALFAANGAEVLAADTAALREGASLVEFVMLLSSSDWQYAFRNLPGSEYMSVLDEGERAFSSRWDRLLDNGTSLRHAWPPLTSRSPADVEFEADVQTRLSETVGAEDAREGDVSAARRRLQARAGRVWRRAMDAAVDRNGVWGSSGPEYLKLDVTEDVRRRRLRVVRDPHGSSHKEASMDDDASASQRQQTAVAVGEVSQRRRSGSRSSDSAWLRAAKQWVGIKPLASAGALSDFAPEDAEYDAANGNGFGGVGVALSANQTSGGGMTGGQVGAAPVALGAAAVVASVVAGVATGVATVAAPMIGALVKKYILSLKAEAITPGLQARGLVRVTPKAFYFTVDADDPKFGDESNKFRAYIDGLSGKWVLSEIAMALPRRYMGRHTGVELFFTSRTSLLLSFDSAPNARRFLRSLPASAVGGNSSAGAINQLGLGVAGVGRALGIRSAGPQKSDAVRLFEKAGDVTLRWQRRELSNFDYLMHLNTLAGRTYNDLNQYPVFPWILVDYESPEIDLSDPAVYRDLSKPVGALNPQRLAQFVERFENWDDDGSDVPPFHYGSHYSSAGYVLFWLLRLEPFATLHLDLQGGRFDFAGRLFFSIAQAWRNCLDSSSDVKELIPELFYLPDVLRNANGYDLGLLDDGTRIGDVVLPPWAATPEEFVRINREALESEHVSAHLHEWIDLIFGYKQQGADAVAAHNVFYYLTYEGSVDLDAIDDPVTRQAVEQQILSFGQTPARLLTEPHPSRNEVAEASPLASKGHPLNKGWSYEGLRKPLLLPTVSQDAGIALVSFNADSGSIVTILSNQCYATHKWSRIPAAQLPAASKELDAMTFAIDLDPACASHDAMAQRRLGEPYDPTVCQFAQSYAVTSDHKTLITAGFWDASFKTFSLDSGRHIQSIYSHRDVVTCLSLASDDSVLITGGRDATARIWDWGRNRKVQAQSIARPRAILTGHESPVDCVDVSVGLGVVATGSAGVCLLHGLGGEFLRSVRHPACGRPGVVLLCEELGRLLVHYRDGRGSLALFTLGGVHLRSEDAREEIYAMRLDPTGTFVVTGGSARRATVRRLHDLLVLHQYDGVAGAVRSLDLTADGYFAVCGVSGGQLAVCALDWSTWREPKGGPQPQQQAQQQALPSLTAEGPETTAVLDAAN* # PASA_UPDATE: g4277.t1, single gene model update, valid-1, status:[pasa:asmbl_6283,status:3], valid-1 NODE_35_length_56163_cov_43.6556 . gene 19875 22735 . + . ID=g4277;Name=g4277.t1 NODE_35_length_56163_cov_43.6556 . mRNA 19875 22735 . + . ID=g4277.t1;Parent=g4277;Name=g4277.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 19875 19928 . + . ID=g4277.t1.utr5p1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 19875 19974 . + . ID=g4277.t1.exon1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 19929 19974 . + 0 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 20064 21544 . + . ID=g4277.t1.exon2;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 20064 21544 . + 2 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 21654 21789 . + . ID=g4277.t1.exon3;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 21654 21789 . + 0 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 21881 22005 . + . ID=g4277.t1.exon4;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 21881 22005 . + 2 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 22137 22260 . + . ID=g4277.t1.exon5;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 22137 22260 . + 0 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . exon 22353 22735 . + . ID=g4277.t1.exon6;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . CDS 22353 22570 . + 2 ID=cds.g4277.t1;Parent=g4277.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 22571 22735 . + . ID=g4277.t1.utr3p1;Parent=g4277.t1 #PROT g4277.t1 g4277 MASHLSTVFATCAAQGRPAFVTYVTAGFPTVDAFPAVLLGLQRGGADIIEVGVPFTDPMADGATIQGANQIALNNGVDSVAKCLDLVKKARSVGVSVPIVFMGYSNPFIKHGETELMRDCVAAGVDGFIIVDLPPEESQHFRAACSAYGLSFIPLIAPTTTDSRIAKLAATADSFIYCVSLTGTTGARTAVSADLPEFLKRIKKHTKLPLAVGFGISSREHFHNVGRLAEGVVIGSAVITRLESLAAASTAPDALADGIAQWAAEVSGRSLGDVPSHARAASAAASLQGLATAPADGEAANRFGNFGGRFVSETLVAALEELETVFKEAMADPKFHEELRSYYSYVGRPTPLHLADRLTADAGGARIWLKREDLNHTGAHKINNAIGQALLAKRLGKTRIIAETGAGQHGVASATVCAKLGLELVVYMGAEDVRRQALNVFRMEMLGAKVVPVHSGSKTLKDAINEAMRDWVTNIQTTHYLIGSAIGPHPFPTIVREFQSVIGRESRKQMLEIAGKLPDAIVACVGGGSNSIGMFHPFIEDASVQLWGAEAGGDGVDTPRHSATLCAGTPGVLHGTRTYLLQDGKGQIQETHSISAGLDYPGVGPEHAWLKDTNRASYVAVTDRESLIGFKKLTQLEGIIPALESSHAVYFGLELAKKLGPGKDVLICVSGRGDKDIDSVRAALPKFGCKLRMRTNEDVGNTTAPSNGH* # ORIGINAL: g4270.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 5458 6753 . + . ID=g4270;Name=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 5458 6753 . + . ID=g4270.t1;Parent=g4270;Name=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 5458 5545 . + . ID=g4270.t1.exon1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 5458 5545 . + 0 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 5633 5682 . + . ID=g4270.t1.exon2;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 5633 5682 . + 2 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 5767 5960 . + . ID=g4270.t1.exon3;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 5767 5960 . + 0 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 6045 6119 . + . ID=g4270.t1.exon4;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 6045 6119 . + 1 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 6233 6294 . + . ID=g4270.t1.exon5;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 6233 6294 . + 1 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 6399 6500 . + . ID=g4270.t1.exon6;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 6399 6500 . + 2 ID=cds.g4270.t1;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 6614 6753 . + . ID=g4270.t1.exon7;Parent=g4270.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 6614 6753 . + 2 ID=cds.g4270.t1;Parent=g4270.t1 #PROT g4270.t1 g4270 MTHLKRAAEGPAIGAPSAKQRRHEGSLTEDALYKPLSSGPAAANVESHLTDALVKSIVADTNNAEDIYKKKVLGKVLLLDAAETKKDSGSRRGHDLQAVPHRTHRDNISKSFHLYEPLHTLWCQYAVELLGTDYPSNPQHCATKLLKADLHGCKIEVSHAKCPSMVGQSGIVVKENENTFFIVTAQNNVKVIPKTNTAFYLLGLPGIRIVLYGEQFRFRSAERSARKFKARATIDL* # ORIGINAL: g4287.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 54083 54910 . - . ID=g4287;Name=g4287.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 54083 54910 . - . ID=g4287.t1;Parent=g4287;Name=g4287.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 54083 54910 . - . ID=g4287.t1.exon1;Parent=g4287.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 54083 54910 . - 0 ID=cds.g4287.t1;Parent=g4287.t1 #PROT g4287.t1 g4287 MKVLMPLPDIDFDTTEAAVAWQALSDAAIPVVFATERGSDGPIPACDPLLLTGVLFGQLGADEHPKQCYARMIASDSYQRPVAWADIVPADYDGLVLSGGHAKGMRQYLGSQVLAQKVAEFFLLGRPVAAICHGPIVLARALDPSTGKSVIHGYKSTSLPKYMEWSAYLATFWARGKYYRTYDEYVEDEMRSVLADGKAQYVTGPVPFACIGAPPRGTQTDDTHAMVVVDRHYVSARWPGDAYLYARTFVKMLRERGGAVSGSTGEAEAAPLASS* # PASA_UPDATE: g4281.t1, single gene model update, valid-1, status:[pasa:asmbl_6286,status:3], valid-1 NODE_35_length_56163_cov_43.6556 . gene 36711 41777 . + . ID=g4281;Name=g4281.t1 NODE_35_length_56163_cov_43.6556 . mRNA 36711 41777 . + . ID=g4281.t1;Parent=g4281;Name=g4281.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 36711 37032 . + . ID=g4281.t1.utr5p1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 36711 37167 . + . ID=g4281.t1.exon1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 37033 37167 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 37380 37475 . + . ID=g4281.t1.exon2;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 37380 37475 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 37752 37845 . + . ID=g4281.t1.exon3;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 37752 37845 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 37975 38103 . + . ID=g4281.t1.exon4;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 37975 38103 . + 2 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 38261 38343 . + . ID=g4281.t1.exon5;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 38261 38343 . + 2 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 38697 38989 . + . ID=g4281.t1.exon6;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 38697 38989 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 39200 39322 . + . ID=g4281.t1.exon7;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 39200 39322 . + 1 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 39468 39658 . + . ID=g4281.t1.exon8;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 39468 39658 . + 1 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 39808 39872 . + . ID=g4281.t1.exon9;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 39808 39872 . + 2 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 40209 40315 . + . ID=g4281.t1.exon10;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 40209 40315 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 40471 40690 . + . ID=g4281.t1.exon11;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 40471 40690 . + 1 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 40892 40933 . + . ID=g4281.t1.exon12;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 40892 40933 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 41129 41270 . + . ID=g4281.t1.exon13;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 41129 41270 . + 0 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . exon 41398 41777 . + . ID=g4281.t1.exon14;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . CDS 41398 41618 . + 2 ID=cds.g4281.t1;Parent=g4281.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 41619 41777 . + . ID=g4281.t1.utr3p1;Parent=g4281.t1 #PROT g4281.t1 g4281 MPVVKQGHMLKRAQGKSAFTFKKSWQRRLFVLTEQLLQYYEGEEPKPDKMKGSVPVCTIKCVEQVDEDAFNRKHMIQIVHGENENHLILYTVAADEADRDDWINKLRTCCRHNPSLQDRFHPGAYLSSSWTCCNSDTFMSWGCQDAFNYTPDANGQLKVRAGPEVRTPDLGRGRSLVGSPRETRQSVIDSPRSSSSPSTQRSSRAAPAAAAASEFTVVALYTYTAAAPEDLSFGEGDRLTIVSRQDANWWLARADNGATGHIPSNYVAVTNSLESEDWYHGKMDRNAAASILKAQGQDGAFLIRESESKPGDYSISLRHGDNIKHYHLQRTTDNLFYVAEQHAFATVQELVNYHSRNSGGLVTRLKHPLMRNAPAPVGLGHDKWEIARKDIVIDKELGGGQFGVVYSGMAWGKVPVAIKMLKEGAMSEDDFLAEAQVMKAFSHPHLVQLLAVCSRERPLYIVTELCRNGCLLSYLKSGVGSRLSRDVLLYMSVQIAAAMSYLETHQFIHRDLAARNVLVSEDNIMKVGDFGLARFVLDDEYTASEGTKFPIKWAAPEVISYARFSTRSDVWSFGVVIWETFSRGRAPYPNLSNAEVLDGVVGGLRLECPTECPPEVYKLMRRCWEARPDDRPSFSELHRDLCALSD* # PASA_UPDATE: g4279.t1, single gene model update, valid-1, status:[pasa:asmbl_6284,status:12], valid-1 NODE_35_length_56163_cov_43.6556 . gene 32548 34289 . + . ID=g4279;Name=g4279.t1 NODE_35_length_56163_cov_43.6556 . mRNA 32548 34289 . + . ID=g4279.t1;Parent=g4279;Name=g4279.t1 NODE_35_length_56163_cov_43.6556 . five_prime_UTR 32548 32624 . + . ID=g4279.t1.utr5p1;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . exon 32548 32689 . + . ID=g4279.t1.exon1;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . CDS 32625 32689 . + 0 ID=cds.g4279.t1;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . exon 32961 33078 . + . ID=g4279.t1.exon2;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . CDS 32961 33078 . + 1 ID=cds.g4279.t1;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . exon 33272 34289 . + . ID=g4279.t1.exon3;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . CDS 33272 34216 . + 0 ID=cds.g4279.t1;Parent=g4279.t1 NODE_35_length_56163_cov_43.6556 . three_prime_UTR 34217 34289 . + . ID=g4279.t1.utr3p1;Parent=g4279.t1 #PROT g4279.t1 g4279 MEDLRKRIDEIDARLIETLNERASVSVDIGRLKNTADSSVYVPSREKLVYDKVNRINAETNGLLPNGALQAIYREIMSASIALQRPLAIAYLGPPATNTHQAARAKFGASVSYVECETIHDVFESVSRGKARYGVVPIENSTEGSVANTLDELAASSGRLKVYAEVYMPIDHYLVSRSTLLSSVRRVYSHPQALAQCRWWLNSNMRHAELIPVSSTARAAEMASKEGDGAAALSSLLASELYDIAILASRVQDIADNATRFIVIGTECEAPTGDDRTFLFFSLSDRPGALCDALSALKSAGVSLTKIESRPSRARAWDYNFFADIVGHAEDAAIKAAVEAMTGHCTFVTVLGSCPNGRHVPPLAEPLRDGGNVPL* # ORIGINAL: g4284.t1 original gene structure, not modified by PASA NODE_35_length_56163_cov_43.6556 AUGUSTUS gene 47372 49577 . + . ID=g4284;Name=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS mRNA 47372 49577 . + . ID=g4284.t1;Parent=g4284;Name=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 47372 47763 . + . ID=g4284.t1.exon1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 47372 47763 . + 0 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 47861 48172 . + . ID=g4284.t1.exon2;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 47861 48172 . + 1 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 48249 48588 . + . ID=g4284.t1.exon3;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 48249 48588 . + 1 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 48709 48918 . + . ID=g4284.t1.exon4;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 48709 48918 . + 0 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 49015 49152 . + . ID=g4284.t1.exon5;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 49015 49152 . + 0 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 49241 49324 . + . ID=g4284.t1.exon6;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 49241 49324 . + 0 ID=cds.g4284.t1;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS exon 49428 49577 . + . ID=g4284.t1.exon7;Parent=g4284.t1 NODE_35_length_56163_cov_43.6556 AUGUSTUS CDS 49428 49577 . + 0 ID=cds.g4284.t1;Parent=g4284.t1 #PROT g4284.t1 g4284 MVGMEGVEDVSSSFNVGGSGACASQTHATLGICPACDYAVESSDMGGERLGIAVEVCQKEESRATALEARRHVLFSLFCLSPGDDGAACGSFSLEKQIRIAFASKNELASLALSACASMRNEDSRQLSEFRDDAFLAKNIAFIRISSERQAPRATHAGSVAVFGDRIVDFRTYVYQLNDDGPADEMTMTLDENGGESADESMTAASHWLLPAADFEGIWESLMYDDPEVKNALLRYASTAILFSDKRVDPNVISWNGVVLLHGPPGTGKTSLCKVTPWLSRYPCALHGPSRNSHTVVLFSKALAQKLSVRMAHRYTHGELVEINSHSLFSRWFSESGKLVMKMFQRIQAFVDDPSALVFVLIDEVESLTAARKAASSGAEPSDAIRVVNAVLTQIDALKKHKNVIILATSNVTGSIDCAFIDRADIKQYIGPPSFRAIYEMIRTCLLELMRVGIIVPEHVIVDLNTLELMGFPDNESNRAAKKLYEISKKSEGLSGRSLKKVPFLAHALFLGKSTANIDEFLSAVEKATARQLSDREELSK* # PASA_UPDATE: g11363.t1, single gene model update, valid-1, status:[pasa:asmbl_288,status:3], valid-1 NODE_1076_length_14167_cov_79.6547 . gene 2793 7660 . - . ID=g11363;Name=g11363.t1 NODE_1076_length_14167_cov_79.6547 . mRNA 2793 7660 . - . ID=g11363.t1;Parent=g11363;Name=g11363.t1 NODE_1076_length_14167_cov_79.6547 . five_prime_UTR 7482 7660 . - . ID=g11363.t1.utr5p1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 7293 7660 . - . ID=g11363.t1.exon1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 7293 7481 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 6766 6879 . - . ID=g11363.t1.exon2;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 6766 6879 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 6060 6141 . - . ID=g11363.t1.exon3;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 6060 6141 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 5633 5730 . - . ID=g11363.t1.exon4;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 5633 5730 . - 2 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 5042 5221 . - . ID=g11363.t1.exon5;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 5042 5221 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 4750 4788 . - . ID=g11363.t1.exon6;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 4750 4788 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 4469 4538 . - . ID=g11363.t1.exon7;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 4469 4538 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 4040 4139 . - . ID=g11363.t1.exon8;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 4040 4139 . - 2 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 3523 3651 . - . ID=g11363.t1.exon9;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 3523 3651 . - 1 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 3244 3313 . - . ID=g11363.t1.exon10;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 3244 3313 . - 1 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . exon 2793 2949 . - . ID=g11363.t1.exon11;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . CDS 2863 2949 . - 0 ID=cds.g11363.t1;Parent=g11363.t1 NODE_1076_length_14167_cov_79.6547 . three_prime_UTR 2793 2862 . - . ID=g11363.t1.utr3p1;Parent=g11363.t1 #PROT g11363.t1 g11363 MEKLDHADPRLYNVTINLETVQFPLALIDPANPAAAVDQFVRIRDRNHAIVPAICAQSVYLYKIFSEMRRALYRKVHPQADISIVIPDEASTIPEALADYGIVDEPFKVGLIGLGRIGKYVLNALLEKGVDPKHVIVSTRRPDICGEYSQKGVLCVYDNKRVASSCHIVYVCCQHSQLPAVIKDIRGLSDRFLVVVSLVSGLSYDKLCEMYKVRLAMKSELQFLYQEPSNGIIIPHYQGDIALPTQLLRTCPLRPEKVSDSDSGLEWAGRLLLVLFEMAAAVYMTEAEALRVVCKIVFGMRPPKIVLNHLKLPDPPLVAERAQPNFIELWARKELIQETMALFAESAVRTSFLDNFKAIVAPPARKESPPKSPPKPRRVVKIAKP* # PASA_UPDATE: g11362.t1, single gene model update, valid-1, status:[pasa:asmbl_291,status:12], valid-1 NODE_1076_length_14167_cov_79.6547 . gene 2 873 . + . ID=g11362;Name=g11362.t1 NODE_1076_length_14167_cov_79.6547 . mRNA 2 873 . + . ID=g11362.t1;Parent=g11362;Name=g11362.t1 NODE_1076_length_14167_cov_79.6547 . exon 2 873 . + . ID=g11362.t1.exon1;Parent=g11362.t1 NODE_1076_length_14167_cov_79.6547 . CDS 2 292 . + 0 ID=cds.g11362.t1;Parent=g11362.t1;5_prime_partial=true NODE_1076_length_14167_cov_79.6547 . three_prime_UTR 293 873 . + . ID=g11362.t1.utr3p1;Parent=g11362.t1 #PROT g11362.t1 g11362 LISRYQWKRVMRVAVDSQSVHAGFHGKTDAKGKESTWRKSTNISNRTIVGLCTVSYEKDAKSPILARRRARSIDDLLFSSPPGTPSFNAPSVDASA* # ORIGINAL: g11365.t1 original gene structure, not modified by PASA NODE_1076_length_14167_cov_79.6547 AUGUSTUS gene 12488 13883 . + . ID=g11365;Name=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS mRNA 12488 13883 . + . ID=g11365.t1;Parent=g11365;Name=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 12488 12598 . + . ID=g11365.t1.exon1;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 12488 12598 . + 0 ID=cds.g11365.t1;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 12754 12838 . + . ID=g11365.t1.exon2;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 12754 12838 . + 0 ID=cds.g11365.t1;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 13170 13343 . + . ID=g11365.t1.exon3;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 13170 13343 . + 2 ID=cds.g11365.t1;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 13713 13883 . + . ID=g11365.t1.exon4;Parent=g11365.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 13713 13883 . + 2 ID=cds.g11365.t1;Parent=g11365.t1 #PROT g11365.t1 g11365 MAAVEAASAILTQYAALARSLFDSLAVAADASQRIGQGGAGAADPAVITASLVEKEKELRVALRKLDEHQQFQRSISALKASIDSHDVLIRRAVALLSASETELEGVLDVAKERMASIRQAKAGAVDPAELVRYANFTSYSSAAPHGWQPNMPLGPYNTPFPTDVQMRSGLLYSVSESDA # ORIGINAL: g11364.t1 original gene structure, not modified by PASA # ORIGINAL: g11364.t2 original gene structure, not modified by PASA NODE_1076_length_14167_cov_79.6547 AUGUSTUS gene 7929 11908 . - . ID=g11364;Name=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS mRNA 7929 11908 . - . ID=g11364.t1;Parent=g11364;Name=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 11855 11908 . - . ID=g11364.t1.exon1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 11855 11908 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 11385 11468 . - . ID=g11364.t1.exon2;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 11385 11468 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 10681 10914 . - . ID=g11364.t1.exon3;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 10681 10914 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 10220 10366 . - . ID=g11364.t1.exon4;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 10220 10366 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 9733 9804 . - . ID=g11364.t1.exon5;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 9733 9804 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 9147 9287 . - . ID=g11364.t1.exon6;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 9147 9287 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 8520 8709 . - . ID=g11364.t1.exon7;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 8520 8709 . - 0 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 7929 8050 . - . ID=g11364.t1.exon8;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 7929 8050 . - 2 ID=cds.g11364.t1;Parent=g11364.t1 NODE_1076_length_14167_cov_79.6547 AUGUSTUS mRNA 7929 9227 . - . ID=g11364.t2;Parent=g11364;Name=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 9147 9227 . - . ID=g11364.t2.exon1;Parent=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 9147 9227 . - 0 ID=cds.g11364.t2;Parent=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 8520 8709 . - . ID=g11364.t2.exon2;Parent=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 8520 8709 . - 0 ID=cds.g11364.t2;Parent=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS exon 7929 8050 . - . ID=g11364.t2.exon3;Parent=g11364.t2 NODE_1076_length_14167_cov_79.6547 AUGUSTUS CDS 7929 8050 . - 2 ID=cds.g11364.t2;Parent=g11364.t2 #PROT g11364.t1 g11364 MDAIKAEIDRKRKALEDKELITGQRKYFRRGDQEAKREAEYIKKHQPTQAEADERASAQLAHADNKVDALAILTKNIAVPALPAAEVIRRLRERGAPIRLFGETDDERALRLRRLEILEPEVNKGMRNDFMDALEDVDQEYIDKLLKQNEEKDTEGERAAQDEEEKNLHEDIMRLWPIMLNKGDADADQEFMLKFINYLLRLYEIHLAERSDEVKRTMQGKLASATYKQTVGYIKPLLRHLKRKTLSGTIKEFLVQIVDCLLQREYVQANDAYLQMAIGNAPWPMGVTMVGIHSRPGREKVGEKHIAHVLNDETQRKYIQALKRLMTFCQRRFPTDPSKCVEYEKRD* #PROT g11364.t2 g11364 MQGKLASATYKQTVGYIKPLLRHLKRKTLSGTIKEFLVQIVDCLLQREYVQANDAYLQMAIGNAPWPMGVTMVGIHSRPGREKVGEKHIAHVLNDETQRKYIQALKRLMTFCQRRFPTDPSKCVEYEKRD* # ORIGINAL: g10169.t1 original gene structure, not modified by PASA NODE_645_length_19666_cov_44.3536 AUGUSTUS gene 9079 11421 . + . ID=g10169;Name=g10169.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS mRNA 9079 11421 . + . ID=g10169.t1;Parent=g10169;Name=g10169.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 9079 11421 . + . ID=g10169.t1.exon1;Parent=g10169.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 9079 11421 . + 0 ID=cds.g10169.t1;Parent=g10169.t1 #PROT g10169.t1 g10169 MQPQDSNNKARWTPIVIPNVPKPPIVRASQSAAPTAITAPTRDPRVIIPQDKMIPNSQTGLRSRMEPQKSATNASTDKQTTFPRADRADDSATHGKPTTGVRSSGSSASSSATTMKQDGRDDADVKAKTAQAETKASAASTKAVDDTSSSKARKRTRADSESEGLHPERKSSSDSQRAATSSPVSNKRTEPTSDAVPALKLIVTQKNAGSGLTIAPGNKSSPSKATVELGDGVPLKKRARTDPDGADSESGRAGKGSSSEHISNAYTALLEARFADSVSLCNYVEATFNRSEWGDLQLVRGQAHWRLGNLETADRDFREWTVGAPGHPFADQLWREFGAAVMGYEAAKQAQLNHVQAGDNRPSPSKRAQEKSPSPVPVVTATATAAKRVSFTDECGSDRSPASTPRDAPASAPRDAPASAPRDAPASGQASATAAGADSVSTVGHTDQASVEAVNSAAVFWETAVTVPMETEIPATAAAEIVPRASSTSTSTPATPTQQEQYQPGGATFNTYFPQPDVHRDQVPNHNKVESLSLPIVERSKQAYDARKESNLRTVTPTAPARASFDSLQLSQSQMSSTISEADTEPTAMHDTTLSSSTSSYAGDWQLLHQRQREAYIAHENAASKQRGMDFAQRKSPHSMCRYGAASSAWMAMQQRHRQMLMASQMVAFAMACAPDAGMDDVFGLTPFFGGFGGRFPGGSMGMPADVMFVGFQHADAAFGYAAAAAARVPTFAFPVETGAEMYPEDAIRGRFGGMSQHAYAHDDGTMMRACSHGCLQRHH* # PASA_UPDATE: g10172.t1, single gene model update, valid-1, status:[pasa:asmbl_8661,status:12], valid-1 NODE_645_length_19666_cov_44.3536 . gene 16541 18264 . - . ID=g10172;Name=g10172.t1 NODE_645_length_19666_cov_44.3536 . mRNA 16541 18264 . - . ID=g10172.t1;Parent=g10172;Name=g10172.t1 NODE_645_length_19666_cov_44.3536 . exon 18194 18264 . - . ID=g10172.t1.exon1;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . CDS 18194 18264 . - 0 ID=cds.g10172.t1;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . exon 17819 17979 . - . ID=g10172.t1.exon2;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . CDS 17819 17979 . - 1 ID=cds.g10172.t1;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . exon 17414 17560 . - . ID=g10172.t1.exon3;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . CDS 17414 17560 . - 2 ID=cds.g10172.t1;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . exon 16541 17105 . - . ID=g10172.t1.exon4;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . CDS 16945 17105 . - 2 ID=cds.g10172.t1;Parent=g10172.t1 NODE_645_length_19666_cov_44.3536 . three_prime_UTR 16541 16944 . - . ID=g10172.t1.utr3p1;Parent=g10172.t1 #PROT g10172.t1 g10172 MLFKRLSDASPTRCTIETGPYFFHYLIELGVCYMALCDKSYPKKLAYSYLDDIQREFQQSHGPEVGTAARPYAFIKFDTFMQKTKKMYLDTRTQRNLSKLNDELHDVQRIMMQNIDEVLGRGERLDKVSQMAGTLSMESKKYLKDAKYLNWLALYRKYGPILAVVVTILLVLYVRFYWF* # PASA_UPDATE: g10173.t1, single gene model update, valid-1, status:[pasa:asmbl_8663,status:12], valid-1 NODE_645_length_19666_cov_44.3536 . gene 19258 19666 . - . ID=g10173;Name=g10173.t1 NODE_645_length_19666_cov_44.3536 . mRNA 19258 19666 . - . ID=g10173.t1;Parent=g10173;Name=g10173.t1 NODE_645_length_19666_cov_44.3536 . five_prime_UTR 19665 19666 . - . ID=g10173.t1.utr5p1;Parent=g10173.t1 NODE_645_length_19666_cov_44.3536 . exon 19258 19666 . - . ID=g10173.t1.exon1;Parent=g10173.t1 NODE_645_length_19666_cov_44.3536 . CDS 19281 19664 . - 0 ID=cds.g10173.t1;Parent=g10173.t1;5_prime_partial=true NODE_645_length_19666_cov_44.3536 . three_prime_UTR 19258 19280 . - . ID=g10173.t1.utr3p1;Parent=g10173.t1 #PROT g10173.t1 g10173 PPPPPLPRQLCATKEGRVIFRKRKVYPIARELHKWEKDRIADRTIYALVQLLIGDEYGAHLKEIELPSDIAKKLDDIRVREDTELAAEISAEGIPRSTAYDEEIVVPHQRSETTTAVGVPEEVVSAR* # ORIGINAL: g10170.t1 original gene structure, not modified by PASA NODE_645_length_19666_cov_44.3536 AUGUSTUS gene 11742 14030 . - . ID=g10170;Name=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS mRNA 11742 14030 . - . ID=g10170.t1;Parent=g10170;Name=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 13941 14030 . - . ID=g10170.t1.exon1;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 13941 14030 . - 0 ID=cds.g10170.t1;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 13675 13769 . - . ID=g10170.t1.exon2;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 13675 13769 . - 0 ID=cds.g10170.t1;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 13309 13576 . - . ID=g10170.t1.exon3;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 13309 13576 . - 1 ID=cds.g10170.t1;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 12653 13169 . - . ID=g10170.t1.exon4;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 12653 13169 . - 0 ID=cds.g10170.t1;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 11742 12364 . - . ID=g10170.t1.exon5;Parent=g10170.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 11742 12364 . - 2 ID=cds.g10170.t1;Parent=g10170.t1 #PROT g10170.t1 g10170 MAMADTEWRSMVSSLIKETELNLERVKRVEALTQLPLTSPSLSMQPRHFREVDEVETRTVNKRAGAAALVNSQRVTENVRSISERLEYQAEVVEVLVDAVAGAKRERDAIAREAASMRDRVSFLEDALERAESDARKERDKSKFMRTELDHWKSGVESELNHFRGVVALVTRSVSTGLPSSSGEGSAYLSMVGDDRGNPSGIAAIGRLSRELADAMRVNKEEHDALLRQVQGAVGQCAKFEATLTSMEIGARDAARKIVALQRRVEAAEESIASTGGTRLLANEGARKEVADLRRMVKDMLAKVDDQQRLVESLGAALADQTAANKNKTFAQYFAAESPRAVQPLRQRGASFVLTGAPYASRVLDPPSDVTLGPADITSASLGGSVAFESVGADDKSMSTTENDVSYSENTNSLLSRSSGRGGNRPKRDAATTREKAGASTVIGGGAASRDYMTSSARRVRGSSGHGSGNASHGGVQGESSGFDPRKMSAGEHDLDIITAVDSSHVSDGGHLHESWTDDLSFRSGGDGRR* # ORIGINAL: g10168.t1 original gene structure, not modified by PASA NODE_645_length_19666_cov_44.3536 AUGUSTUS gene 7134 7739 . - . ID=g10168;Name=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS mRNA 7134 7739 . - . ID=g10168.t1;Parent=g10168;Name=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 7689 7739 . - . ID=g10168.t1.exon1;Parent=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 7689 7739 . - 0 ID=cds.g10168.t1;Parent=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 7337 7439 . - . ID=g10168.t1.exon2;Parent=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 7337 7439 . - 0 ID=cds.g10168.t1;Parent=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 7134 7228 . - . ID=g10168.t1.exon3;Parent=g10168.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 7134 7228 . - 2 ID=cds.g10168.t1;Parent=g10168.t1 #PROT g10168.t1 g10168 MEAFWDSLPSPSPDVHKPLLLLASAFLFLVLCVTIAWRSYADDISHVFSDRGTGARPAHNIVDNYPMTPLTTAIENLSRKVE* # PASA_UPDATE: g10171.t1, single gene model update, valid-1, status:[pasa:asmbl_8662,status:3], valid-1 NODE_645_length_19666_cov_44.3536 . gene 14477 16328 . + . ID=g10171;Name=g10171.t1 NODE_645_length_19666_cov_44.3536 . mRNA 14477 16328 . + . ID=g10171.t1;Parent=g10171;Name=g10171.t1 NODE_645_length_19666_cov_44.3536 . five_prime_UTR 14477 14612 . + . ID=g10171.t1.utr5p1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . exon 14477 14716 . + . ID=g10171.t1.exon1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . CDS 14613 14716 . + 0 ID=cds.g10171.t1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . exon 14913 15033 . + . ID=g10171.t1.exon2;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . CDS 14913 15033 . + 1 ID=cds.g10171.t1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . exon 15180 15297 . + . ID=g10171.t1.exon3;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . CDS 15180 15297 . + 0 ID=cds.g10171.t1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . exon 15454 15709 . + . ID=g10171.t1.exon4;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . CDS 15454 15709 . + 2 ID=cds.g10171.t1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . exon 16007 16328 . + . ID=g10171.t1.exon5;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . CDS 16007 16187 . + 1 ID=cds.g10171.t1;Parent=g10171.t1 NODE_645_length_19666_cov_44.3536 . three_prime_UTR 16188 16328 . + . ID=g10171.t1.utr3p1;Parent=g10171.t1 #PROT g10171.t1 g10171 MPATEGKTFSFQFVGDESKSPVLNTKERKELLQKWYMLHSMKYWKFCFDEHFQTYQMDTFIKDFFSDPVVQHTLRVMSSGGSWASLCPNPKSIAKEDVPCTLTSMDFFDRLSESGVVRETGQIVKCFDEPHPTFTISDELRKMLLISDSDNYSMYSASERSEFLFRIFSHVCLGGAICQFEDEVEPYLDTAKLLYKDLVAVQKDTVSGLLSVRSSVVSITEIEGTELYPRADNPQNFFYLIVDPVKRHVTVWYNAWCDL* # ORIGINAL: g10166.t1 original gene structure, not modified by PASA NODE_645_length_19666_cov_44.3536 AUGUSTUS gene 268 5709 . - . ID=g10166;Name=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS mRNA 268 5709 . - . ID=g10166.t1;Parent=g10166;Name=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 5613 5709 . - . ID=g10166.t1.exon1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 5613 5709 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 5406 5525 . - . ID=g10166.t1.exon2;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 5406 5525 . - 2 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 5083 5282 . - . ID=g10166.t1.exon3;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 5083 5282 . - 2 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 4758 4901 . - . ID=g10166.t1.exon4;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 4758 4901 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 4435 4574 . - . ID=g10166.t1.exon5;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 4435 4574 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 4160 4232 . - . ID=g10166.t1.exon6;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 4160 4232 . - 1 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 3834 3960 . - . ID=g10166.t1.exon7;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 3834 3960 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 3513 3678 . - . ID=g10166.t1.exon8;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 3513 3678 . - 2 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 3182 3248 . - . ID=g10166.t1.exon9;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 3182 3248 . - 1 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 2877 2990 . - . ID=g10166.t1.exon10;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 2877 2990 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 2527 2622 . - . ID=g10166.t1.exon11;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 2527 2622 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 2272 2394 . - . ID=g10166.t1.exon12;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 2272 2394 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 1827 2000 . - . ID=g10166.t1.exon13;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 1827 2000 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 1482 1634 . - . ID=g10166.t1.exon14;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 1482 1634 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 1221 1273 . - . ID=g10166.t1.exon15;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 1221 1273 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 805 970 . - . ID=g10166.t1.exon16;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 805 970 . - 1 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 520 580 . - . ID=g10166.t1.exon17;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 520 580 . - 0 ID=cds.g10166.t1;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 268 389 . - . ID=g10166.t1.exon18;Parent=g10166.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 268 389 . - 2 ID=cds.g10166.t1;Parent=g10166.t1 #PROT g10166.t1 g10166 MAMADVSAVERAVLLRDKKVIESLIQKTTADQDARLTTLNLAAAVIDAEFEKALKSPLADRVLGTSSDDDETDFRVAHLVRIRSILANADANAETEVWTSLGVLLVGVASLEAFLQHNWTGPALPFNPRDLLPAKVRDNADASDSAIIDTLCADGEEAYRLTPHPSLLLVARSIIVDCGDLFASAARSLSWWRARTFRTQQELLDDPASSLVDGARDAMQRVLDDADFLRSGGRDLASRAFLEMGIIQFDFHDVLHAKEYFEKAKSSSGLELEMTGVLGKRTRFQVKEIAQLVLNAESKTESDLEEKETGSDGGHVPQSLALNDDTLLEKISLSDTAEKTFKNLRTIDQAIVIAFCLNVRNSNPKHGLVTEEMFPYVNRVLENPNNWMVHSTGLLIRSRLEGDKSRTVERGVLQLQVLVDQYADKDTSAAERLLYLHSLAFPSRWRLERELGERFLALGVARTALDIFERLQMWEQYITCLRVMEKDAKAEEAVRQRLAIEPTPRLWCVLGDIKNEESAYITAWETSKCRFPRAQRSLGRIYLTAKNYPAAIRAFELALEINPGMEAMWFSLGCAAMNIEDWNKAIFALRRCITLSQEDGEAWNNLATVYIKTKDMERAYGALSEAVKIRFDSWKMWENFLFVCVDVLQLDDAIRAYNRLLDIRDKYLEVKVLNALVDRVVDKTLVTDTHAHDLLVRKTATLLGRIASTVTNDEELWAIYAKFHYTIGNKEK # ORIGINAL: g10167.t1 original gene structure, not modified by PASA NODE_645_length_19666_cov_44.3536 AUGUSTUS gene 6174 6902 . + . ID=g10167;Name=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS mRNA 6174 6902 . + . ID=g10167.t1;Parent=g10167;Name=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 6174 6314 . + . ID=g10167.t1.exon1;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 6174 6314 . + 0 ID=cds.g10167.t1;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 6474 6529 . + . ID=g10167.t1.exon2;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 6474 6529 . + 0 ID=cds.g10167.t1;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 6647 6698 . + . ID=g10167.t1.exon3;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 6647 6698 . + 1 ID=cds.g10167.t1;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS exon 6807 6902 . + . ID=g10167.t1.exon4;Parent=g10167.t1 NODE_645_length_19666_cov_44.3536 AUGUSTUS CDS 6807 6902 . + 0 ID=cds.g10167.t1;Parent=g10167.t1 #PROT g10167.t1 g10167 MADDDNENEETSQAQQRKMHNSGKADLERVTDYQEEKEIDSKKLDQEALRNLGEKSAKEQEQAAEMERQLATIAVKAEDLELIVNELEVSKDVAERALRQNKGNVVETLRALSA* # PASA_UPDATE: g11007.t1, single gene model update, valid-1, status:[pasa:asmbl_2712,status:12], valid-1 NODE_1820_length_9062_cov_56.3003 . gene 3568 6333 . - . ID=g11007;Name=g11007.t1 NODE_1820_length_9062_cov_56.3003 . mRNA 3568 6333 . - . ID=g11007.t1;Parent=g11007;Name=g11007.t1 NODE_1820_length_9062_cov_56.3003 . five_prime_UTR 6285 6333 . - . ID=g11007.t1.utr5p1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 6267 6333 . - . ID=g11007.t1.exon1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 6267 6284 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 6037 6099 . - . ID=g11007.t1.exon2;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 6037 6099 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 5585 5698 . - . ID=g11007.t1.exon3;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 5585 5698 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 5165 5310 . - . ID=g11007.t1.exon4;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 5165 5310 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 4738 4888 . - . ID=g11007.t1.exon5;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 4738 4888 . - 1 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 4345 4485 . - . ID=g11007.t1.exon6;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 4345 4485 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 4041 4141 . - . ID=g11007.t1.exon7;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 4041 4141 . - 0 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . exon 3568 3812 . - . ID=g11007.t1.exon8;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . CDS 3734 3812 . - 1 ID=cds.g11007.t1;Parent=g11007.t1 NODE_1820_length_9062_cov_56.3003 . three_prime_UTR 3568 3733 . - . ID=g11007.t1.utr3p1;Parent=g11007.t1 #PROT g11007.t1 g11007 MMAGVKSPGGGFMNDAGSQESPSGQKKGVANSQRAVPCVTIRQIMDAKSESGADTYKFQNLELSHCCFIGVVRTIKENSLNISFGVEDGTGLIEVRVWIDSAGDQASFIRQHCVEGTYVRVIGQIRVFQNTRSFQAFSMLPITDFNEITHHMLECVLAHVSASRPKVDAGLSGARGGSMVPTGNVSSNFYNQRDSFAPVAGGDGLTELQRMVQSVVQQNSNSTNGVSIETISRTLGSRVPVSEIDAALNFLSGEGHIYSTIDDHHYKTTG* # ORIGINAL: g11008.t1 original gene structure, not modified by PASA NODE_1820_length_9062_cov_56.3003 AUGUSTUS gene 6960 8787 . + . ID=g11008;Name=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS mRNA 6960 8787 . + . ID=g11008.t1;Parent=g11008;Name=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 6960 7112 . + . ID=g11008.t1.exon1;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 6960 7112 . + 0 ID=cds.g11008.t1;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 7309 7675 . + . ID=g11008.t1.exon2;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 7309 7675 . + 0 ID=cds.g11008.t1;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 7863 8095 . + . ID=g11008.t1.exon3;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 7863 8095 . + 2 ID=cds.g11008.t1;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 8393 8513 . + . ID=g11008.t1.exon4;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 8393 8513 . + 0 ID=cds.g11008.t1;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 8783 8787 . + . ID=g11008.t1.exon5;Parent=g11008.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 8783 8787 . + 2 ID=cds.g11008.t1;Parent=g11008.t1 #PROT g11008.t1 g11008 MDNSTDAFVAGANVTAEWVHEADIYVAYAALVIMALIPIILGSIRSATSQEITTEDPQEVMSKKDALMFPLFASAFLLSIYIVFKLFHKDYINMMMSLYFVVLGVTAVSRTLRAATESFAPKSVLDRRYRLEFSRILSSLHHKAAVSNGGAGSVDAASPAASTEIKTADKEDEQLFDLHFDGLDIVCFVSSLAIGGTYLLTRHWVITNIFGFSFSVNAIEMLSLGTYQIACILLSGLFFYDIFWVFGTDVMLTVAKSFDAPIKVVFPKGVLSGNWAPDQFALLGLGDIVIPA* # ORIGINAL: g11006.t1 original gene structure, not modified by PASA NODE_1820_length_9062_cov_56.3003 AUGUSTUS gene 127 2511 . + . ID=g11006;Name=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS mRNA 127 2511 . + . ID=g11006.t1;Parent=g11006;Name=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 127 235 . + . ID=g11006.t1.exon1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 127 235 . + 0 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 703 843 . + . ID=g11006.t1.exon2;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 703 843 . + 2 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 1225 1392 . + . ID=g11006.t1.exon3;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 1225 1392 . + 2 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 1543 1614 . + . ID=g11006.t1.exon4;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 1543 1614 . + 2 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 1767 1968 . + . ID=g11006.t1.exon5;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 1767 1968 . + 2 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 2159 2180 . + . ID=g11006.t1.exon6;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 2159 2180 . + 1 ID=cds.g11006.t1;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS exon 2422 2511 . + . ID=g11006.t1.exon7;Parent=g11006.t1 NODE_1820_length_9062_cov_56.3003 AUGUSTUS CDS 2422 2511 . + 0 ID=cds.g11006.t1;Parent=g11006.t1 #PROT g11006.t1 g11006 VIQKVMEWYRPGAVVLQCGADSLAGDRLGCFNLSLKGHADCVKFVKSFNVPLLLLGGGGYTIRNVARCWTYETSLAVDQEIAMDLPYNDYFEYFGPDFSLNVSPTNMENQNSKDYLEKIRIRLMETLRNMPFAPSVQTQPIPDAAYDSDDDVDEDADADVRLPDRETDKRIACDEEFSDSEDEGDGRRDAHSYKRPGSERRSRDAPSIQAPMLLSRDVLVAPAVNGTAEIKKRDDEEEAAAVKDEVMEDAPEAKRADADSAMEVDPK* # ORIGINAL: g158.t1 original gene structure, not modified by PASA NODE_1047_length_14432_cov_45.4561 AUGUSTUS gene 323 9650 . - . ID=g158;Name=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS mRNA 323 9650 . - . ID=g158.t1;Parent=g158;Name=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 9535 9650 . - . ID=g158.t1.exon1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 9535 9650 . - 0 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 9195 9272 . - . ID=g158.t1.exon2;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 9195 9272 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 8758 8832 . - . ID=g158.t1.exon3;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 8758 8832 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 8460 8531 . - . ID=g158.t1.exon4;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 8460 8531 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 8106 8177 . - . ID=g158.t1.exon5;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 8106 8177 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 7785 7856 . - . ID=g158.t1.exon6;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 7785 7856 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 7157 7228 . - . ID=g158.t1.exon7;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 7157 7228 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 6776 6847 . - . ID=g158.t1.exon8;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 6776 6847 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 6464 6535 . - . ID=g158.t1.exon9;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 6464 6535 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 6076 6147 . - . ID=g158.t1.exon10;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 6076 6147 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 5682 5753 . - . ID=g158.t1.exon11;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 5682 5753 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 5394 5465 . - . ID=g158.t1.exon12;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 5394 5465 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 5082 5153 . - . ID=g158.t1.exon13;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 5082 5153 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 4733 4810 . - . ID=g158.t1.exon14;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 4733 4810 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 4106 4494 . - . ID=g158.t1.exon15;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 4106 4494 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 3366 3787 . - . ID=g158.t1.exon16;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 3366 3787 . - 2 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 2437 3136 . - . ID=g158.t1.exon17;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 2437 3136 . - 0 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 2061 2278 . - . ID=g158.t1.exon18;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 2061 2278 . - 2 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 1740 1851 . - . ID=g158.t1.exon19;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 1740 1851 . - 0 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 1510 1526 . - . ID=g158.t1.exon20;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 1510 1526 . - 2 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 1090 1265 . - . ID=g158.t1.exon21;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 1090 1265 . - 0 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 880 1013 . - . ID=g158.t1.exon22;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 880 1013 . - 1 ID=cds.g158.t1;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 323 654 . - . ID=g158.t1.exon23;Parent=g158.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 323 654 . - 2 ID=cds.g158.t1;Parent=g158.t1 #PROT g158.t1 g158 MVLILPLVGLIAMDRDLSVNKIVSLPSGIFDKLSRLNTLTLFQNRISNLSAMVGIFDKLTLLTTLNLASNQIMSLPPGYFDNLGVTLRQLVLGTNQIATLPPRIFDQLTLLTTLHLFANPLSDLPAGIFDNLISLVQLILYTNQIATLPPGIFDKLTKLTSLGLHSNVIKVLPPSIFDKLNALSTINLMANQIAALPPGIFDKLVALQGLELYSNQITALPAGIFDRLTGLTTLDLWANRIAGLPAGIFDKLTNLASLTLRQNPIGTLPPGIFDNLTKLTYLGLGSIQVSTVPPGIFDKLTALTQLDFYFNTFTTLPAGLFDNLSVLSTLDLSYSHLVTLPTGIFDKLPKLTNLIVSSNPGARKDMCSNATSHCVGKTCSACFCDVGWTGLSCDTPCDVASNTYGSDCSVPCSTGCANGTHCDRFTGACGCAIGMSGLKCDAPCPKGTYGANCTSKCPCGNGVCNNVDGTCACAVGSGYYGPNCIACLCVTNGTCPDGYFGTGTCDCSKLPGIGGPNCNTTCDHLDGPNRMYGNGCQFYCPCRMGSSTCNAVNGSCTCNLGWEGYTCDRAIKPIQPVLNVGPVMMGGTHHVAIRLQWSNPALPPNALPIKRYEVTRWGCDGSKPLSVGNVSEYIDTNVTVKQGYMYIVRAFNTLNVSSEGNEGLAGITELYSLDPPKAPSNVIATPVLTPDTLLPTIRLAWTEDTDSGPNIRTTILRDGQFLTHVSITEYVDMNVSQNRTYLYNITSENKYGNSSSASVSGTAPVVPTNGTINGVNSGNSRETSSANIAGPVAGAVVGAVVGAAAVLISILYVRKRSSRKKKEALARSELELIDTVVRRPETAEIEIPGSCIRMKNRIGEGEFGEVYLADVTLDRDGTTMFLKGAAKSFKVTSLSTVDDIRSARSAFMAEIDLMRTIPPHGHVIGLIGVCTQSEPNCMVLEFAAHGDLRNFLTDGKCALTQVDLLCFAIVQRRPQGSCRTQLHGGRRPTTSEKGWKLSPNAQVIVKIADMGLSKDTAGTDYYRGKTRRKLPVKWMAPESLERRIFTHSTDLWSFGVVVWEIFSRGAKPYPGIDNYAVAGFLAQNRRMDPPADCPPSVQVIMETCWRKLPETRPSFAQVVVQLRRAMAAFFRNRDSRLGSTDPPGHVIRRETPTGDTNMVSVPEKDVYDNGPEVYLETHSALGTTSPIF* # ORIGINAL: g159.t1 original gene structure, not modified by PASA NODE_1047_length_14432_cov_45.4561 AUGUSTUS gene 13663 14249 . - . ID=g159;Name=g159.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS mRNA 13663 14249 . - . ID=g159.t1;Parent=g159;Name=g159.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 14180 14249 . - . ID=g159.t1.exon1;Parent=g159.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 14180 14249 . - 0 ID=cds.g159.t1;Parent=g159.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS exon 13663 13928 . - . ID=g159.t1.exon2;Parent=g159.t1 NODE_1047_length_14432_cov_45.4561 AUGUSTUS CDS 13663 13928 . - 2 ID=cds.g159.t1;Parent=g159.t1 #PROT g159.t1 g159 MSVLMLLLRHFRVLRVSEKAELEGLDSYTHGEPSYPEFVALRHDLEEGIDNSKRRSELPLAMMGRSVPDSFFGVGDSGGVTGQVALVEDGASEAGCIRSRYQAQADGAQTD* # ORIGINAL: g13914.t1 original gene structure, not modified by PASA NODE_1366_length_11743_cov_39.6194 AUGUSTUS gene 78 2160 . - . ID=g13914;Name=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS mRNA 78 2160 . - . ID=g13914.t1;Parent=g13914;Name=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 2144 2160 . - . ID=g13914.t1.exon1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 2144 2160 . - 0 ID=cds.g13914.t1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 1840 1962 . - . ID=g13914.t1.exon2;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 1840 1962 . - 1 ID=cds.g13914.t1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 1299 1458 . - . ID=g13914.t1.exon3;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 1299 1458 . - 1 ID=cds.g13914.t1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 875 1034 . - . ID=g13914.t1.exon4;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 875 1034 . - 0 ID=cds.g13914.t1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 554 633 . - . ID=g13914.t1.exon5;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 554 633 . - 2 ID=cds.g13914.t1;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 78 155 . - . ID=g13914.t1.exon6;Parent=g13914.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 78 155 . - 0 ID=cds.g13914.t1;Parent=g13914.t1 #PROT g13914.t1 g13914 MFREPRPERERRPEEAPAPLIGPGSTYGAQPKQRRFFRRRPINEDRRSWILEDRDKAHQFVGKREAQAASYALFVLRDDSSFELTPVEKFYKFTPKITYKTLTIEQVEEQLNTKTKRAEYAHRWMNKRLGIGADEADAKEPGEKQGKKAKADDDDDEDIEMVAVDERDELKRFGKKEAGDADEEAGLDFEEKFDDDEEDAPRPVDE # PASA_UPDATE: g13917.t1, single gene model update, valid-1, status:[pasa:asmbl_1354,status:3], valid-1 NODE_1366_length_11743_cov_39.6194 . gene 8837 10589 . + . ID=g13917;Name=g13917.t1 NODE_1366_length_11743_cov_39.6194 . mRNA 8837 10589 . + . ID=g13917.t1;Parent=g13917;Name=g13917.t1 NODE_1366_length_11743_cov_39.6194 . five_prime_UTR 8837 8881 . + . ID=g13917.t1.utr5p1;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . exon 8837 8989 . + . ID=g13917.t1.exon1;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . CDS 8882 8989 . + 0 ID=cds.g13917.t1;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . exon 9561 9716 . + . ID=g13917.t1.exon2;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . CDS 9561 9716 . + 0 ID=cds.g13917.t1;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . exon 10330 10589 . + . ID=g13917.t1.exon3;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . CDS 10330 10497 . + 0 ID=cds.g13917.t1;Parent=g13917.t1 NODE_1366_length_11743_cov_39.6194 . three_prime_UTR 10498 10589 . + . ID=g13917.t1.utr3p1;Parent=g13917.t1 #PROT g13917.t1 g13917 MKYNVNVSSSRRKSRRAHFAAPSNVRRVIMSAPLSKELRGKYNVRSLPIRKDDEVTVTRGHYKGQSGKVVQVYRKKWVVHIERVTREKANGSTVNIGIHPSKVEVTKPKLDKDRRGILERKNRSKLADKGKGKHTEESVAMAE* # ORIGINAL: g13916.t1 original gene structure, not modified by PASA NODE_1366_length_11743_cov_39.6194 AUGUSTUS gene 6094 8257 . - . ID=g13916;Name=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS mRNA 6094 8257 . - . ID=g13916.t1;Parent=g13916;Name=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 8190 8257 . - . ID=g13916.t1.exon1;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 8190 8257 . - 0 ID=cds.g13916.t1;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 7584 7850 . - . ID=g13916.t1.exon2;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 7584 7850 . - 1 ID=cds.g13916.t1;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 6728 7261 . - . ID=g13916.t1.exon3;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 6728 7261 . - 1 ID=cds.g13916.t1;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS exon 6094 6409 . - . ID=g13916.t1.exon4;Parent=g13916.t1 NODE_1366_length_11743_cov_39.6194 AUGUSTUS CDS 6094 6409 . - 1 ID=cds.g13916.t1;Parent=g13916.t1 #PROT g13916.t1 g13916 MDVLNDDAVLLILSLLSPEDIASLSNALWRPWCRAHFLLDAPSDPSDPSGVVTWSETYSLHRNKYRRYFGVYADVRGSWRKIDSWIKANLPEMKLLPGTNDAHLDSIEAELGTVLPDDLRLSLLTHDGQTLGPSSPSLFGETRFYNVRLSYALMSAANALTIASYMKTHPFLGKIPGLFPIAYDPRNRKCIAVACKDGAAEGGLPTGSVVMPSGKGCFVRAASYGSFLRSYADAFEGGCVGTYEDGTISAFPLKPIPTATTNGVTISVAALFVPEVADVRQDNFFTYCVRMSMSSDHDPRDSCQLVSRHWIIRDGNGAIETVEGPGVVGQYPIMKPGATFEYSSNTGFDTDSGEMEGTFQMRRFSDGVLFDAVVPKFKMEALPFCSRPDDPPLE* # PASA_UPDATE: g13915.t1, single gene model update, valid-1, status:[pasa:asmbl_1353,status:3], valid-1 NODE_1366_length_11743_cov_39.6194 . gene 2796 5821 . + . ID=g13915;Name=g13915.t1 NODE_1366_length_11743_cov_39.6194 . mRNA 2796 5821 . + . ID=g13915.t1;Parent=g13915;Name=g13915.t1 NODE_1366_length_11743_cov_39.6194 . five_prime_UTR 2796 3132 . + . ID=g13915.t1.utr5p1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . exon 2796 3795 . + . ID=g13915.t1.exon1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . CDS 3133 3795 . + 0 ID=cds.g13915.t1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . exon 4042 4179 . + . ID=g13915.t1.exon2;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . CDS 4042 4179 . + 0 ID=cds.g13915.t1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . exon 4493 4672 . + . ID=g13915.t1.exon3;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . CDS 4493 4672 . + 0 ID=cds.g13915.t1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . exon 5042 5163 . + . ID=g13915.t1.exon4;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . CDS 5042 5163 . + 0 ID=cds.g13915.t1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . exon 5476 5821 . + . ID=g13915.t1.exon5;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . CDS 5476 5653 . + 1 ID=cds.g13915.t1;Parent=g13915.t1 NODE_1366_length_11743_cov_39.6194 . three_prime_UTR 5654 5821 . + . ID=g13915.t1.utr3p1;Parent=g13915.t1 #PROT g13915.t1 g13915 MASAADAGDAPPSRNSKDDCDEGAQNTAVLDRKIDATLSTAERESQGADVLCPQPTCASSDIVVSSTGTASVDAASPPFDWASFDGLIGATEDALASRLISACNRRESECDYQLCMAAAALRSFKHDSLLRPFPKHFLTESGDKDYDRMRLAMDAVPLSVQSIANGLEKDMLDAGVCGLLDWALYPRNFRLRRVDTKETFAKLQRATGPSSYPVTPDYVFAVIYPERTEEPFKRMAAEYGTQCGYHGSPFENFYSIVSNGLASHMNKTSLYGEGTYLSKDLSVSYNFSQAQRGWEGSALGASLACVCACDVIDHPDIVAAEKGKIRQVESESGEPIPAKYYLVRNNSHIRVRYVLVFVSSGPSPLRTSTPTRGSRWSAASHWMRQHLFYLILIVYGLILVYAGGGYKFNFLRRLTSLFWPPQVRRT* # PASA_UPDATE: g13918.t1, single gene model update, valid-1, status:[pasa:asmbl_1352,status:12], valid-1 NODE_1366_length_11743_cov_39.6194 . gene 10906 11565 . - . ID=g13918;Name=g13918.t1 NODE_1366_length_11743_cov_39.6194 . mRNA 10906 11565 . - . ID=g13918.t1;Parent=g13918;Name=g13918.t1 NODE_1366_length_11743_cov_39.6194 . five_prime_UTR 11564 11565 . - . ID=g13918.t1.utr5p1;Parent=g13918.t1 NODE_1366_length_11743_cov_39.6194 . exon 11432 11565 . - . ID=g13918.t1.exon1;Parent=g13918.t1 NODE_1366_length_11743_cov_39.6194 . CDS 11432 11563 . - 0 ID=cds.g13918.t1;Parent=g13918.t1;5_prime_partial=true NODE_1366_length_11743_cov_39.6194 . exon 10906 11157 . - . ID=g13918.t1.exon2;Parent=g13918.t1 NODE_1366_length_11743_cov_39.6194 . CDS 10978 11157 . - 0 ID=cds.g13918.t1;Parent=g13918.t1 NODE_1366_length_11743_cov_39.6194 . three_prime_UTR 10906 10977 . - . ID=g13918.t1.utr3p1;Parent=g13918.t1 #PROT g13918.t1 g13918 ALEFILHFLKNVLAGEPDLAKCATAAYEASLKQYHGFLVKGIFSLAMKAVPYRDDFFKALGKGVADEATVKADMQAFVDALGKDLDILIKFFKDKKLDTDSKA* # PASA_UPDATE: g2068.t1, single gene model update, valid-1, status:[pasa:asmbl_6176,status:3], valid-1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . gene 2296 4447 . + . ID=g2068;Name=g2068.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . mRNA 2296 4447 . + . ID=g2068.t1;Parent=g2068;Name=g2068.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . five_prime_UTR 2296 2329 . + . ID=g2068.t1.utr5p1;Parent=g2068.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 2296 4447 . + . ID=g2068.t1.exon1;Parent=g2068.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 2330 4438 . + 0 ID=cds.g2068.t1;Parent=g2068.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . three_prime_UTR 4439 4447 . + . ID=g2068.t1.utr3p1;Parent=g2068.t1 #PROT g2068.t1 g2068 MSSRAVKDVSLLLDLSEEVLVHIVKLGRFTLTDVGHLRATCKRVCGFLDRIRDTINEHVVGDLSKYFTYWWWNFDWAASSGHLEVIELLHEDEVKRGRVGIQCTNDAIQSAIKRSDWNMFVFLVRNRKELSVGANLYTRPYPWTNLSDEQLLFLLHEAPSFLAGHALCDAIRGPIRRVNLDMVSELLRYVTNEFIGLLLEAFLCFRETPAVFEFVLAECRKRNLDEQPLALRLFHEAVAQRCGGVDLLDVVLRYFPTTLAKFDATERDLMVKNATDPAVLSRLREFGFKRAVVDKWTEDLVLSVETEGAEIEPNETLVSCLHHQDFVAAEFVAGRYSVSWRYVSSKMMCSGPITALKWLHARGHLDTTPEILLAGGMLTPERVDFLWPLARNEVPQDPYDIGDTVANIVVCGWFNCVIKEGNIAMLRYLCEHLDVVGLYGIAGDATGDPDNAAENGHIDIISYMINVNSRIAPITDSAATQRADAFDLQLRPFDLTNTLEIAVLGGHYRLAHLLIRRVPGLRLSLATACVSRRWSLFHLALASLETAERQKALEDALLESIRKGRIEFVNWFEENEPDVFERCRPMFWESLRSLDTHFWYALLSKHPTCVPTKLHISVVHNLYDILVLERRLGIEILARPVSVWGERTQSVLRLLVDFAVPVILPTPAEMDRLRDQIPSRWQYLTEWIAAGKFVTATTTANQ* # PASA_UPDATE: g2071.t1, single gene model update, valid-1, status:[pasa:asmbl_6177,status:12], valid-1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . gene 12391 21927 . + . ID=g2071;Name=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . mRNA 12391 21927 . + . ID=g2071.t1;Parent=g2071;Name=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 12391 12568 . + . ID=g2071.t1.exon1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 12391 12568 . + 0 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 12669 12965 . + . ID=g2071.t1.exon2;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 12669 12965 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 13069 13398 . + . ID=g2071.t1.exon3;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 13069 13398 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 13606 14379 . + . ID=g2071.t1.exon4;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 13606 14379 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 14497 14580 . + . ID=g2071.t1.exon5;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 14497 14580 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 14719 14877 . + . ID=g2071.t1.exon6;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 14719 14877 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 14974 15423 . + . ID=g2071.t1.exon7;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 14974 15423 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 15519 15893 . + . ID=g2071.t1.exon8;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 15519 15893 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 16128 16634 . + . ID=g2071.t1.exon9;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 16128 16634 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 16932 18594 . + . ID=g2071.t1.exon10;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 16932 18594 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 18706 18989 . + . ID=g2071.t1.exon11;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 18706 18989 . + 1 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 19107 19622 . + . ID=g2071.t1.exon12;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 19107 19622 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 19833 19909 . + . ID=g2071.t1.exon13;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 19833 19909 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 20000 21260 . + . ID=g2071.t1.exon14;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 20000 21260 . + 0 ID=cds.g2071.t1;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . exon 21419 21927 . + . ID=g2071.t1.exon15;Parent=g2071.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant . CDS 21419 21927 . + 2 ID=cds.g2071.t1;Parent=g2071.t1 #PROT g2071.t1 g2071 MKIPVSAGKMPKPYEVHLNDSCPCVDKSPMCDGVCNCGNVGEQCSALEHGYGRTCLVDKVNTESQKGRPPAFSTKAIMRTLAEGTMCACLVANYGGPGSRAIEPLAELAGKSYEEVQAFCGSLINPLPRDPASSTVGRGTALAREGCDQLCENDANCEAVTYVDMSASCIVFGDANGIFAPRKWTRPGGLSPTIWARVGSDRSEKVQIEATFRPPVDGQYSFAVPTGARFLIYNEGESGDHADFTSGLSSLSRQVTVTCPEGSGTRCGAESTVVETTLGKWVSDSRSIFRYRWYGDYCYDLTDPRLKTDNFSVCRAIGDTNVLGALHTSDGMDTSQVPTCTIPLELGVAYKMRLQLNGPPWAWLDSNLLRPDLSKISADRAHWYNLTCDVPYSFQIFGPVRRRPVQSPLDPYMDVLYPDDAVDDAYVPIPPDVDGQDRVYLARCKSPSRSNYQSKELRLIDIAELNSFRPSSPTSPTDPTGSPTNELPFIFNVAKLTTEFFGYTVVKDNDDFDWTILGTRKDRSLLVSMPSVMEWTSFFDFGGYLTENKPPIMPDVTTSSRTAIVTWGCYAPSEFDEIEPFSGILPRSDSFSTGISLTQSKQKVIVGGTEAHALFFVPPVSVNTHLPTIAVTISGEDGQVFTARGFDQVTGVSVRMPAVGTVLRADLDSLSPTPTWLIVARESNAVHFSLDDCKRTPSACKQFPSAVTVGVVPSSVAWICEETGPSKSRMIGLTTVPTSALGIGVDFTTNTIGAAVGDWDFLNDNVVNCTIESDSSIVVESLAPGAASVFHFNPKVHGSLLVDGIRIAATQYLDVEIVFHDARSGSGGATSTVILTKADSIEYFPTETLYEWLSFVVGDISSLTIKNIGTGTPSLKVMLRGIVTETCHMAAAFDVARFDEERFEDGYLAIHNVTITLPFVQTDNGPAPTLPTTLIARDYTGLVGSQFGDDLTVDIATAFGHGIANKMGNRFCELKRNDELAAYVCDLAASKDLSDTIKTWMRGAQARVIFSPAAFQLNKNVEIPARATANGVLWNGVQDLFSKLALTIHYEACGTVTDEPMVFCINSAMNMTVDEGLCAGLEKSGIVTCGKQCKCDVGCSGCWSALPISGDAGQCTKDTSSSVTVYSRAQDLTCNLCKGPTVVFANVNKAYCQAPAPPSRVTCSPTEVLTTDALWGELQSLRIVQISADRSTKEMEILLGVPAMAARQALAEAEAGIAEAQLRILSSNSSTSMKVPVAEAEAALATAKVETLRQSKTLLSGLVEQSIVADLAEAHTRERQALAGLVQPLAGKTLPRIEVLGAGYNLVRANPHCTDDPFGMGGIVPLVDLSYTSMAFVGDKFLPDGVYATQLTSADFNSDMEILTSESELRESAMLGIKFSTEEDSAEEISSQKNAFSLNSQFSTESENMRSSKDVFVRNKVTVTVARMNLLPNFANIARPSAALLDYWRSISIDDDCCLSEITTDCNSNCNALERMPDVFGTHLMKAVTLGCIGMQQLQLDVVEVKSLVENDMSADAAASSEETEGKPSAGLGVTTKVSTDVSVALKKAMQSSSSSTKQKIQERYLGGIPQPGGFFDDGQVNNDALKTYAGTCSENPFITDYTLMRVDEFVEQMGPSKFDEDREVFAAKLKKFRIIMREYCAGIVNCAPDARDADRIDPVMFNDIARFTYTHSDTRLFTLTTIPDNIEKVDNVRITSDISGTKDSMIDLSPDDEVCFPAVTGEYNDWVNDPDILDFPGMAWWLSDSPQFPGCHGSLCAGEFRMLRVVPTATTYDACRQACQDTSTCVAGTFVSNPSSGTPSGDTYHFAVAQCVLFLNSLLTENTILHAWNFDNHLGWRQHWRGRLISWRCGVVPIRPWDAYGLRSFRKHYADGDNTKENSLFRITYPVEKHIEISDKTLRYGKGFTLASKTGCLSEVKQDPVKLLYRWSVTNVKSSSNSSAPRCIIFRFLSRVLPIGSVVSYADSVFIEASTNFTINPENFIFNRRPSLFVAPADANGALSTVHIIAENSPGSDLQSFSWSISRGASLSVSQSIGEGTTSEYGFEASASVEQSLTSAIVTIEFTIPVSRVSIPVAFAAAVKRIGKESIATYALRLIKSDFVITVRRLPETSESDSTTTDEAPASMLLVPGRQSDDVYVVNVTFASQLRPRDTLFVSLSAPDNIVGIRGKQVASVVAKSPVIVITNMPTTIWAVLSCQILDPVTKNVTVIGRLHFSQLIMNDEKDRVSPSDFSVYRDNKLANYVFDIHSRDAGVAMSPDDTITPLASSTFSFSVSIPDGINISSITIGVDSGRVFTLELTPFPSSARASIQSASASPLKGCIMGAGKAWYASDTSDGDGAGKVPITPQPKEPAPNPAPVDKGKELVQLAEVQQLVNDVVSSKTANLESQTKAWSGAATVGAIMGGLSFVALVIGGIMTYRYRWAVKRMIQRETRFMVGNAADIVTYENSGFAPETHNPLRTMSTDNREPSPAPAPSASTDADRDSDGL* # ORIGINAL: g2069.t1 original gene structure, not modified by PASA NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS gene 5082 9152 . - . ID=g2069;Name=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS mRNA 5082 9152 . - . ID=g2069.t1;Parent=g2069;Name=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 7052 9152 . - . ID=g2069.t1.exon1;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 7052 9152 . - 0 ID=cds.g2069.t1;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 6218 6742 . - . ID=g2069.t1.exon2;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 6218 6742 . - 2 ID=cds.g2069.t1;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 5298 6111 . - . ID=g2069.t1.exon3;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 5298 6111 . - 2 ID=cds.g2069.t1;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 5082 5139 . - . ID=g2069.t1.exon4;Parent=g2069.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 5082 5139 . - 1 ID=cds.g2069.t1;Parent=g2069.t1 #PROT g2069.t1 g2069 MPAWAALTSKRSPLSQTVAQLFVRDSGGKLTDTPSRNVEHIVFDSDFSQLVGDLPEGVDRLAKDFESLQGIKRMHGFAAHSIVAQEGFVVFHSNPYFPILAPGPNGPRVVPPTDSDGADAWNTGPGLSIVEQYYMCVSITSASSSSIFDALAAMNPFVTAHRVSGSYLSELGRFATHLQPFSGSVYAAGSWPSFLECFGTAGVDPKRQCVRRYQLAFGTAQPKPQKDFANTNVTILVKMRAAEPSVCVSSNADGTSLTLDYSWGLRPWSSPGFMTALIGPHVARGFVCFGTLFTEQGIGTAAAVCIRNQNLWNATLDAFNFVEAVCQAAPDRRDVRSLEGPVVHVAARRREASRRWVADGGSPAKEEAGADCGEGEFCDDQRRELAFSRSMAPPSAKPKPSVQDGMDDKWISKLKQASDGMWGDMFHDFRQRETRAQAADGDADFEREYTPFCLFRQFSHRGQRVRDPSLIFTRPHSSLRDGEFASIQVRWTVEHKAYASIEVNEQVDGARTKTHLATFVVDGKKNGILSVILPGLDEDGSRLFDAKHATTFQYETPLSGRSVFALHNLNSTSTFSASVTLKTKPQSVLAMSWSLTSYLPPKHRTLRPNEQCVAGPCTYRISQHASNSNGSLQFVGLINEHIEYRDAARQKKRATVCRGKSSCIIELETMNEKCLLEFEKATPPPPTFPKSSNSVPKGQTEREAWLGSGAVRTRIDEFEFALCERHIYQDSPTNDNRDRGATVWNLLLSQVGPLLPNQRLAQYVPVCHQYKPGHGYLFSVGDEVRSVTFEPSVEIEEQQVLDRQSCQKILQRPLGPYSLPASETEPGLYLTLYDFVNKRPVVSAYSFMLGPGARSNYVKSMRTYVASTHGFMINYVLSGWAAADQQSDDAVLDCAVDGGGVGIFGRGFLLEVNEEKEQLLTNSLMLLDKNFRLQFSGNFHRGHLNPNHINTLYRSATPTAEEGPYTQSQRDLATFTFLNVIPQNPSCNSKWAIDEHRIAEALLRITEALHLDGWSPTDRTVYLMTGTRSVRQGDTIWTELCAPEVFGAFRVERMNNAKADYLSGPPVALAACHAKYNRQLDNTQLPIADRTRLERYRSIVSNTLRNENLPADDAKLKVEEIHEQQPPTHSCSNLDENACREHQPVEGITSSRRSSNAFPGESSKL* # ORIGINAL: g2070.t1 original gene structure, not modified by PASA NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS gene 10112 11297 . + . ID=g2070;Name=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS mRNA 10112 11297 . + . ID=g2070.t1;Parent=g2070;Name=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 10112 10488 . + . ID=g2070.t1.exon1;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 10112 10488 . + 0 ID=cds.g2070.t1;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 10615 10701 . + . ID=g2070.t1.exon2;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 10615 10701 . + 1 ID=cds.g2070.t1;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 10838 10924 . + . ID=g2070.t1.exon3;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 10838 10924 . + 1 ID=cds.g2070.t1;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 11222 11297 . + . ID=g2070.t1.exon4;Parent=g2070.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 11222 11297 . + 1 ID=cds.g2070.t1;Parent=g2070.t1 #PROT g2070.t1 g2070 MGGKRLHVGVGINPFARNRHRNQHASAVRAMYWTILTCLGLALLTTSFRLASAAPAEATTPPPEDIQVSNAPRADHDRDKRADDNSQTCCNTNVASKCLCFGNVNVITKWTTSSIVLCAKLSGTTMSFSGRCHGEYLPDAMAVFTGSLPPNINKVIIEDMTAVRPGGPLPQALLDRLNSTLTQFNISSNNIENLEPNAFANMEDLTVL* # ORIGINAL: g2072.t1 original gene structure, not modified by PASA NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS gene 23052 23903 . + . ID=g2072;Name=g2072.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS mRNA 23052 23903 . + . ID=g2072.t1;Parent=g2072;Name=g2072.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS exon 23052 23903 . + . ID=g2072.t1.exon1;Parent=g2072.t1 NODE_352_length_26276_cov_24.3827_potentialcontaminant AUGUSTUS CDS 23052 23903 . + 0 ID=cds.g2072.t1;Parent=g2072.t1 #PROT g2072.t1 g2072 MGNIHNRICPHSRWVEAQLGSADLQGKSITIRGPNVRILTAATTSDQLRNWVRRMCFGLLRDSYTVYSITLQDIDMFGKKVGFLKFAADIRHEGNKLPGIVFSRGNSVAILLILFCPETRLHYAVLTSQARVPVGRRLLEIPAGMFSDDEESFCGVAASEIQEEIGLTVEANELFELTSFIDPVENAEQCVFLSPGACDEGIKMFVCVKTIEQKDLALYDQRATGKSAEGEYITVRIVPLTALWRSTCDAKTFIAVALYNQGMAEGEPELAEYVKAANGPLVI* # ORIGINAL: g7663.t1 original gene structure, not modified by PASA NODE_74_length_44472_cov_39.4999 AUGUSTUS gene 40346 44379 . + . ID=g7663;Name=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS mRNA 40346 44379 . + . ID=g7663.t1;Parent=g7663;Name=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 40346 41547 . + . ID=g7663.t1.exon1;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 40346 41547 . + 0 ID=cds.g7663.t1;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 41893 42913 . + . ID=g7663.t1.exon2;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 41893 42913 . + 1 ID=cds.g7663.t1;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 43660 43853 . + . ID=g7663.t1.exon3;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 43660 43853 . + 0 ID=cds.g7663.t1;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 44124 44379 . + . ID=g7663.t1.exon4;Parent=g7663.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 44124 44379 . + 1 ID=cds.g7663.t1;Parent=g7663.t1 #PROT g7663.t1 g7663 MEDRNAAHRAPPPSYSSNHLRPNATPAASSPSPGTAGHQFGSPADHVPAMSPKRTVDVPWAADGVSLAQADLRGRLSFTPDGNPFMLPPTTNCDDRNYYDGVDAQMRPVDTHALAVRGEDPPPPYGASAPGIPVHRKQQVEGMGVDGKDAAGRLLSRGHSVGMPQLPTYAASALNSAASLPTAHTIGDHFGPSALPPPYPTMQESSRVQLPAVLEANTHSSQQAGGMGLAHRIHGDAHSASANDNGIAVNAGNERDGRENRRPPPYVAQRLSHEPSLQMHTRTDSQSSVPGEVTALQRSKGYVHDTSLRSTAAANKRHCPSADNSAHEDVEMAMNVEEDSGTGAHDAHKESKLPAEGQSPSLQANDEDANIKNGGDDGFVGSMFCRMLSVRHFTLEDAHEAKMSLVAHPFFSQLQTVMEDLGSIHAASQQAVFSGNPPAYALQSQSRTNNGVDGRMQAAAAQTTHGSMFGGEVQHKFVDELSVDAFLARHLGAHSTTSMSSAIGSPNDEKPTHLGANLNNNNNNKSSNNSSSNNNNNNNNNNNSNSNSNSANSTHLQPQPPRYGRPGMTEDAHYAGETDVSFHISATSNRARRPSSAGAGIGAGIGATPSFTFIPPQRHGGESNEAVQVLGEPGLPSRGTGHPGHPRHPRDEGDGGGEGERSNVGGAAHVLGVAEAARDASEGQMTDSDGYDEAEAGVATAGGDQDTRDSSVVTHAPAARMGFVATKLQSMARVLEEEMNKATTAFVHHATGLLKEQAMVRPISDADLRAVHSSLAARFSATRLKLKQTACEAIMMTRSKHMTSVRAKRHNFTDSAIDKLEAWFFAHVNDPYPTEDEKQKLAEACNITLVQVSNWFGNRRLRYKKALSNSIVGPKQAKNRPRIVVRLCFC* # ORIGINAL: g7655.t1 original gene structure, not modified by PASA NODE_74_length_44472_cov_39.4999 AUGUSTUS gene 5448 8624 . + . ID=g7655;Name=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS mRNA 5448 8624 . + . ID=g7655.t1;Parent=g7655;Name=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 5448 5470 . + . ID=g7655.t1.exon1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 5448 5470 . + 0 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 5586 5700 . + . ID=g7655.t1.exon2;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 5586 5700 . + 1 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 6031 6104 . + . ID=g7655.t1.exon3;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 6031 6104 . + 0 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 6402 6543 . + . ID=g7655.t1.exon4;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 6402 6543 . + 1 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 6685 6844 . + . ID=g7655.t1.exon5;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 6685 6844 . + 0 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 7008 7135 . + . ID=g7655.t1.exon6;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 7008 7135 . + 2 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 7362 7479 . + . ID=g7655.t1.exon7;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 7362 7479 . + 0 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 7591 7754 . + . ID=g7655.t1.exon8;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 7591 7754 . + 2 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 7902 8065 . + . ID=g7655.t1.exon9;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 7902 8065 . + 0 ID=cds.g7655.t1;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 8474 8624 . + . ID=g7655.t1.exon10;Parent=g7655.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 8474 8624 . + 1 ID=cds.g7655.t1;Parent=g7655.t1 #PROT g7655.t1 g7655 MATTEKQRALEFETAVKKDRIDARQLSSLCFGGIPETPGLRSICWKILLGYLPARRSDWDSVLQQKRNVYVEYLRDLIVNPHAGSRASLSSLVDITEDDHPLNPHPTSKWNEFFKDNEVLDQIDKDVRRTLPDMAFFQMAVAKPPILTEAAEDGFVAGVYLHLGLSVIGYGQSLKQRVERRCLGPKGLKTEVDDGVDYDRPLGHGLECRWEVIERILFVWAKLNPGISYVQGMNEILGPLYFTMANDPSPDWKDHAEADAFYCFNALMSEVHDMFIKTLDDSEVGVRRKMVYLMDCLAAVDEPLAKNMAKKNVNPQFFAFRWLTLLLSQEFQLPDVIRIWDSMFAFEGGRINFLLCFCVAMLVLVRDELLAGDFGENLKMLQNYPLGDVQVIVSKSNEIKAALTAKRLISAM* # PASA_UPDATE: g7661.t1, single gene model update, valid-1, status:[pasa:asmbl_9188,status:12], valid-1 NODE_74_length_44472_cov_39.4999 . gene 32232 35158 . - . ID=g7661;Name=g7661.t1 NODE_74_length_44472_cov_39.4999 . mRNA 32232 35158 . - . ID=g7661.t1;Parent=g7661;Name=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 35126 35158 . - . ID=g7661.t1.exon1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 35126 35158 . - 0 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 34842 34964 . - . ID=g7661.t1.exon2;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 34842 34964 . - 0 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 34551 34684 . - . ID=g7661.t1.exon3;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 34551 34684 . - 0 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 34243 34358 . - . ID=g7661.t1.exon4;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 34243 34358 . - 1 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 33622 34083 . - . ID=g7661.t1.exon5;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 33622 34083 . - 2 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 33244 33356 . - . ID=g7661.t1.exon6;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 33244 33356 . - 2 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . exon 32232 32966 . - . ID=g7661.t1.exon7;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . CDS 32475 32966 . - 0 ID=cds.g7661.t1;Parent=g7661.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 32232 32474 . - . ID=g7661.t1.utr3p1;Parent=g7661.t1 #PROT g7661.t1 g7661 MEDAGQGLMDPLVGQVTPGRLTPTLLLAATSAVIGSSLQFGYNTGVINNPKDAIQTWFTSRGKEFNSFEWSVVVSLFCAGGLIGGLSAGALANKLGRRNALLLNNIFLVAGAAFMAFANVWGLLAVGRLIVGIGCGVATLVVPMYLSEIAPAQYRGALGTLNQLGITLGILIAQLLGMSQALGTESGWRILLGLTAAGSVYQLIVFPFSPESPRYLYSHGKPEKAVDALRRLRRSFAVEGEVAEMEVELAANIRVNSGPGAKGLLVLLDRSLRKPIIISCGLMLCQQLSGINATFYYSATYFKEANVSNQDLATSLVGAVNVLVTVLVVYLIERLGRRTLLLIGLMGMAVTYALLTVSLAFKHTSGMSYVTIAAVMLNVISFAVGPGAIPWLMAAEIIPLEARGPAMSLAVGTNWLANLAVGLSFPSMSDGLGDLTFIPYVATTALGFIFVLRNVPETKGLSQEQIDSLFADGHDNYKGERSPLIGSSAL* # PASA_UPDATE: g7662.t1, single gene model update, valid-1, status:[pasa:asmbl_9185,status:3], valid-1 NODE_74_length_44472_cov_39.4999 . gene 35593 39617 . + . ID=g7662;Name=g7662.t1 NODE_74_length_44472_cov_39.4999 . mRNA 35593 39617 . + . ID=g7662.t1;Parent=g7662;Name=g7662.t1 NODE_74_length_44472_cov_39.4999 . five_prime_UTR 35593 35808 . + . ID=g7662.t1.utr5p1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 35593 35917 . + . ID=g7662.t1.exon1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 35809 35917 . + 0 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 36099 36947 . + . ID=g7662.t1.exon2;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 36099 36947 . + 2 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 37246 37426 . + . ID=g7662.t1.exon3;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 37246 37426 . + 2 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 37608 37756 . + . ID=g7662.t1.exon4;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 37608 37756 . + 1 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 38050 38105 . + . ID=g7662.t1.exon5;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 38050 38105 . + 2 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 38289 38496 . + . ID=g7662.t1.exon6;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 38289 38496 . + 0 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . exon 38832 39617 . + . ID=g7662.t1.exon7;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . CDS 38832 39202 . + 2 ID=cds.g7662.t1;Parent=g7662.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 39203 39617 . + . ID=g7662.t1.utr3p1;Parent=g7662.t1 #PROT g7662.t1 g7662 MAAIIACGVGMGCRSNVLRAIAIAFLISLVVSGTHAVDCGSISFTVSSSTGSLPSGCTRIIGDVYVSVDGVTQLPTASFGTINSISGSLRVTGCRDLTSLVGFNSLQTVGWLDVSSNPALVSLQGLNSLRTVDGNLTLSANVALTSIDGLGSLVSVGKTLTIATNIKLPNVDPLSSLTTVGSLSVSSNTALVNVDGLRRLTLVVANATIAGNNALVDINGLCLLARVGGNLAIRSNLKLGSLDGLVSLREIGSNLFVEKNAILLTIDALRSVRTINGSVSVQQNTKLCYDSDVDFANIAKNGVVVASNRLPDDPCASPRPVPNWPANGRSPSVAVVQARSLPIQWIPAANDNGLVFKYEVLSNSTVIGTLDMFATNTSSTLAKFSPADNPIQFTISGLVPFTTYFLAVRAYNLAGSKLSEYATVRTYSDIPEGVASPSVSVVDARTVQVSWSLPNITNGPIVSYVIRRDGIVAFEGTSLAFRDAGLDPFTTYSYTVEAKTVAGGRESAPAVVKTKEDKPFQVRAPTVTPLSTTKLRISWPNPGQPNGNITKYEVYLVRGNTRTLMYTGTGNTFDLTTGLAANTQYSFLLVASTSQGSTESQQSSGRTPITDSDGSPATVASPAVFVALVALLCALSLVLH* # ORIGINAL: g7654.t1 original gene structure, not modified by PASA NODE_74_length_44472_cov_39.4999 AUGUSTUS gene 3654 5157 . + . ID=g7654;Name=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS mRNA 3654 5157 . + . ID=g7654.t1;Parent=g7654;Name=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 3654 3885 . + . ID=g7654.t1.exon1;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 3654 3885 . + 0 ID=cds.g7654.t1;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 4010 4110 . + . ID=g7654.t1.exon2;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 4010 4110 . + 2 ID=cds.g7654.t1;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 4240 4554 . + . ID=g7654.t1.exon3;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 4240 4554 . + 0 ID=cds.g7654.t1;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 4693 5157 . + . ID=g7654.t1.exon4;Parent=g7654.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 4693 5157 . + 0 ID=cds.g7654.t1;Parent=g7654.t1 #PROT g7654.t1 g7654 MDSRVPIVMRFGDAYSSPVSVKMAPAVMHGHVNVTGEQFLKQQLVGGLLLWKRPLVEISADSSVNDALRMMDIQNLSSLPVYEAARREYIGIISRMDIFLHLCTKPLNNGRVEIHPTETVRQLIGTQAYFKAGPWREAGILTFEPTASVHSIVVAMSLGVKHVMVRTLPAGYADEEEMNEMVHEGCAPANTMISQGDLVKFLCEHNALYKDTFAKSIHSLGLDAPVDGRTIVTASLDTPVISALHEMVNCGADAVAIVNKDDGRLISTLTATDLRGLRPANFGALFASVEDFLRQRHYGNLPMPLAVLGDSDLLGTAVSALVVHVHRVFVVDGVGRPISMLRLVDVIRTVYRDVHLVAGTTGMSTAVREE* # PASA_UPDATE: g7660.t1, single gene model update, valid-1, status:[pasa:asmbl_9184,status:12], valid-1 NODE_74_length_44472_cov_39.4999 . gene 30939 32171 . + . ID=g7660;Name=g7660.t1 NODE_74_length_44472_cov_39.4999 . mRNA 30939 32171 . + . ID=g7660.t1;Parent=g7660;Name=g7660.t1 NODE_74_length_44472_cov_39.4999 . five_prime_UTR 30939 30997 . + . ID=g7660.t1.utr5p1;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . exon 30939 31075 . + . ID=g7660.t1.exon1;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . CDS 30998 31075 . + 0 ID=cds.g7660.t1;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . exon 31461 31529 . + . ID=g7660.t1.exon2;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . CDS 31461 31529 . + 0 ID=cds.g7660.t1;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . exon 31717 32171 . + . ID=g7660.t1.exon3;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . CDS 31717 31809 . + 0 ID=cds.g7660.t1;Parent=g7660.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 31810 32171 . + . ID=g7660.t1.utr3p1;Parent=g7660.t1 #PROT g7660.t1 g7660 MAPPYFDSWEDFAKAAEELYVASPDKARYVVKYRHNEGKLVLKVTDDVVCLKYRTDQAQDIKKLEKLNNSLMRHMISSK* # PASA_UPDATE: g7657.t1, single gene model update, valid-1, status:[pasa:asmbl_9182,status:3], valid-1 NODE_74_length_44472_cov_39.4999 . gene 17350 20256 . + . ID=g7657;Name=g7657.t1 NODE_74_length_44472_cov_39.4999 . mRNA 17350 20256 . + . ID=g7657.t1;Parent=g7657;Name=g7657.t1 NODE_74_length_44472_cov_39.4999 . five_prime_UTR 17350 17474 . + . ID=g7657.t1.utr5p1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . exon 17350 17637 . + . ID=g7657.t1.exon1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . CDS 17475 17637 . + 0 ID=cds.g7657.t1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . exon 17748 17802 . + . ID=g7657.t1.exon2;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . CDS 17748 17802 . + 2 ID=cds.g7657.t1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . exon 17932 18083 . + . ID=g7657.t1.exon3;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . CDS 17932 18083 . + 1 ID=cds.g7657.t1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . exon 18235 18357 . + . ID=g7657.t1.exon4;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . CDS 18235 18357 . + 2 ID=cds.g7657.t1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . exon 18804 20256 . + . ID=g7657.t1.exon5;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . CDS 18804 20107 . + 2 ID=cds.g7657.t1;Parent=g7657.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 20108 20256 . + . ID=g7657.t1.utr3p1;Parent=g7657.t1 #PROT g7657.t1 g7657 MGPLALKEPKPLDKKIVSVLFISLFANAVTLTMLFPFVGFMIMDFGIVKTKSEAGYYAGLVASSLFFGRAIGSYPWGWVADTWGRRPVMIISLLGLVVFTLMFGFSYNLAWAIAARFLTGVINGLIGACKAIISEISDETNQAQGMSIVGTAWGIGLIMGPAVGGILSEPALKHPHIFSANSLFGKFPYLLPCLFSVGLSLIALVLVVLYLPETLPPSRRAPARDAKTQRIAKADEIRLGRVFKARKSDAYHPVSVTEDDEDCSSNAHAEGEGNGVGVNDASLADATGRKRQDVHHSVVEDTIDEETAADVAHFEDDDPIDNEFASGHARQGCGRRAWVRTKRAVTWYLARSTLVTLLRDRLVLLSVIMYAVFSMASIGFDEVYSLWCLADEERGGLAFTSDQIGYSLAIVGAALLLFSVTTYPRIERRLGAVMTYVVCGTLLVVTVVIFPSVSLFRDKKPLVWTSLLTLTSIVRFASNACFTSTSIIVNNTVGPERRGAVNGLANSVTSIARTLGPSLGGSVFAWSLTTGHTIGFPFDYHLIFIIFGFIFLVSVWMAAALPLSINTPKDSAGKALPRPADEGSAPMNMSTLSLGEAP* # PASA_UPDATE: g7658.t1, single gene model update, valid-1, status:[pasa:asmbl_9183,status:12],[pasa:asmbl_9187,status:12], valid-1 NODE_74_length_44472_cov_39.4999 . gene 21458 26788 . + . ID=g7658;Name=g7658.t1 NODE_74_length_44472_cov_39.4999 . mRNA 21458 26788 . + . ID=g7658.t1;Parent=g7658;Name=g7658.t1 NODE_74_length_44472_cov_39.4999 . exon 21458 21853 . + . ID=g7658.t1.exon1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . CDS 21458 21853 . + 0 ID=cds.g7658.t1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . exon 22028 22123 . + . ID=g7658.t1.exon2;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . CDS 22028 22123 . + 0 ID=cds.g7658.t1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . exon 22272 23269 . + . ID=g7658.t1.exon3;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . CDS 22272 23269 . + 0 ID=cds.g7658.t1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . exon 23666 24276 . + . ID=g7658.t1.exon4;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . CDS 23666 24276 . + 1 ID=cds.g7658.t1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . exon 24588 26788 . + . ID=g7658.t1.exon5;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . CDS 24588 26497 . + 2 ID=cds.g7658.t1;Parent=g7658.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 26498 26788 . + . ID=g7658.t1.utr3p1;Parent=g7658.t1 #PROT g7658.t1 g7658 MCARRGRAFARVDVSLLSAALAVTLLCLCGLAPTASTEPLKYKIGSILSLTGQLSDASREQRGSLRAGIAYINAMNILPFNASFDLAGPIDDALDRATSLEASIELRNARVLSVVGPNTSPNAIISHLIFKKYHTPQCSIATSPTLSDTNEFPFFFRTQPSDAHASPMLIQLCNQMRWRKIGILSTNDDYATAFARSLYTEALASTIQVTMTDSATRAVNGVINFDAQLQSLLREKVRIIFIFAYNGDAFVAYDRARELGLVGPGFVWISEHTKYLMNDMISTAAPNAIPFYRRLFTGMIFFTTHPGTGAVYDEFVQFFAANRAKELNVTMTRRSLEMDAGVYGEPTGTDDTIVDDVFGADGIDASVVGVSARAASALLNPVLLPKVLQSPYVFDCVLSIAQSMRVGMLLLNESGMDVAAMGANLTGMTPINITSAHAATVIAALGVNNATLGNAAISRLASASTYGELLMIIIWNIRFLGASGPVQYYSNGDRWPRYALWNFVEGTNVLVGRYERSTGLILEGSPIVFNGGLTSNPGDGIEGSSLSTGAIVGIVLGSVGFVVVVVLLAFASTIVRRANRRAKEQERLRKLEEERRRDALIQTKIAKEGDKTKSLFLANMSHEIRSPLNGILGIAQLLEDEAGSASQKESLSTIRRCGESLLLILNDILDFSKLEANLMVVKREPFDPISVIEDVVALHGELAFRKGLNISFHACCACASCAIGAPMGDSRCILNPGALGALGEGGRFTQVLSNLVSNAIKFTDSGHVTVCTSLIGAHDEEAPSTCHVSQPSAGWPSHVVNADSLIMRKTSAVQRPVAFPPSLQSFENNSEHGNTHDIELIDVRVDPEKGRGGGERPHSNGTGYAAGNGAPYSSTSPSASPPSTQGKGALLLFEVHDTGIGLTEDELPRLFSRFHQGDNSLTKKYQGTGLGLAISASLINLMGGSIGVRSAPGKGSVFWCTLPVCESTAWTQKGPGAYFSHAHKSIPIPRVASGLIDSRGDGEGPCIDVVTLYSGDVAFVACARTCCRLLGFPCRATSIMAPALLSAAPLNATASTNSTGPLRPIIADLDWHVGAGGSVTDANARPADKALSATRLVSWFGSPRRSNAVVGMHRKPLTRAKVKAAIWQEEPEAPPAASGGEGTDPGNDATGCTPSDGAYAVSSATAGDGVIAQGGEARADAHVASVLSLPDMHKSTTTTVKVLVAEDNPINQKVALRIVKNTGYDAVGVEDGRQAVDTYLASPLTVGLILMDLQMPNVNGIDATREIRSAEAQRGLPRVPIYALTASAIGNIERECLANGMDGFVSKPFRKLELEATIRSVCDASQKALATTVTIT* # ORIGINAL: g7653.t1 original gene structure, not modified by PASA NODE_74_length_44472_cov_39.4999 AUGUSTUS gene 254 2785 . - . ID=g7653;Name=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS mRNA 254 2785 . - . ID=g7653.t1;Parent=g7653;Name=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 2656 2785 . - . ID=g7653.t1.exon1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 2656 2785 . - 0 ID=cds.g7653.t1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 2365 2484 . - . ID=g7653.t1.exon2;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 2365 2484 . - 2 ID=cds.g7653.t1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 1994 2118 . - . ID=g7653.t1.exon3;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 1994 2118 . - 2 ID=cds.g7653.t1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 1449 1605 . - . ID=g7653.t1.exon4;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 1449 1605 . - 0 ID=cds.g7653.t1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 837 1006 . - . ID=g7653.t1.exon5;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 837 1006 . - 2 ID=cds.g7653.t1;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 254 595 . - . ID=g7653.t1.exon6;Parent=g7653.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 254 595 . - 0 ID=cds.g7653.t1;Parent=g7653.t1 #PROT g7653.t1 g7653 MDTVSESVQFLVHKALDSLSGPGIDPDGGNGSIVDKDAKMGPAGVLQSYTVGGLLFNKSRLYQLYADETIDQALATLQAHNIVGAPVYNKETKEYTGFLTVFDIMTYLAFGFFKTDETDVTPLHLLERTTHAREVPIEALCGAAQFVRFGSSAWQPSGLYIYEPCTPIRTVLSPMMSGVGRMLVRMLPTGRETGEDDGRMHEGDIPEHKVLSETDVLRFLCQRCDVFKDAFSKKLSELGLEAPGDRESGRTVIVIEPTTPALTAYRRMFQANTDAVAVCSPSDGRIVGTLTASDLRGIRLENAGELLKGASDFVGAQRFGFTPTPVWVTSDSTLLAASTMMLMASVHR # PASA_UPDATE: g7656.t1, single gene model update, valid-1, status:[pasa:asmbl_9181,status:3], valid-1 NODE_74_length_44472_cov_39.4999 . gene 8940 16185 . - . ID=g7656;Name=g7656.t1 NODE_74_length_44472_cov_39.4999 . mRNA 8940 16185 . - . ID=g7656.t1;Parent=g7656;Name=g7656.t1 NODE_74_length_44472_cov_39.4999 . five_prime_UTR 15953 16185 . - . ID=g7656.t1.utr5p1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 15938 16185 . - . ID=g7656.t1.exon1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 15938 15952 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 15590 15796 . - . ID=g7656.t1.exon2;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 15590 15796 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 15353 15457 . - . ID=g7656.t1.exon3;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 15353 15457 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 15037 15157 . - . ID=g7656.t1.exon4;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 15037 15157 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 14473 14549 . - . ID=g7656.t1.exon5;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 14473 14549 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 14083 14154 . - . ID=g7656.t1.exon6;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 14083 14154 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 13547 13642 . - . ID=g7656.t1.exon7;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 13547 13642 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 13282 13404 . - . ID=g7656.t1.exon8;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 13282 13404 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 12664 12853 . - . ID=g7656.t1.exon9;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 12664 12853 . - 0 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 12098 12217 . - . ID=g7656.t1.exon10;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 12098 12217 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 11674 11802 . - . ID=g7656.t1.exon11;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 11674 11802 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 11269 11397 . - . ID=g7656.t1.exon12;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 11269 11397 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 10741 10869 . - . ID=g7656.t1.exon13;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 10741 10869 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 10261 10389 . - . ID=g7656.t1.exon14;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 10261 10389 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 9906 10046 . - . ID=g7656.t1.exon15;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 9906 10046 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . exon 8940 9684 . - . ID=g7656.t1.exon16;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . CDS 9545 9684 . - 2 ID=cds.g7656.t1;Parent=g7656.t1 NODE_74_length_44472_cov_39.4999 . three_prime_UTR 8940 9544 . - . ID=g7656.t1.utr3p1;Parent=g7656.t1 #PROT g7656.t1 g7656 MENYEILSKLGKGAQGSVFLVRDKRDKGEFVMKMVECNDELDASRAIKEAMALRMLEHRNICGYKEFFKTWDKKTEAIHVCIVLSLYKDGDLAKAMEQRRLKKLPLTEKEIKSWFGQLVDGMVYVHNKKFIHRDLKPSNIFMSGDTLIIGDFGVATIMEDTRVKTRTSVGTLNWMAPEVLDRPYDERSDVWSLGCILLQMSTINVLDQGEDSETLMEIKHSPQRLEVVLEEVKKHYGAGLCHVLRQMLRRSFRQRPTMSDLLRLPWVQACLKACNSSLFKATLQSNSSPGIPPHLPPVPKSKGCLCVLESCRKHADVGAYVAESFKALAELTAHKVEYAFTEEDKLSVAQMMLKHLEDSAVQANACKLMKNLMSTTSDDDPLFTSPMIEPILLAMRTHAASVDLQREATSLVWALSTNEDAARVLGEKGAVQDVLGALREHAGQSEICQACCGALFSLAVNEENGKIIQEEKGVNDIIGAMSTHGDHDGLLECACSALWSLSVDDEVVETISDMGGVMIILKAIEVHKKSPKLAKQAFILLASLIVDDHCAYSLVENDDHLDGLGIILATVTAHLDQPDVAENACLLLGEMAEHSDLIEAMTKHNAKGVLAQIAQTHAKNAQVANTAKSAIRTLAEKGAQ* # ORIGINAL: g7659.t1 original gene structure, not modified by PASA NODE_74_length_44472_cov_39.4999 AUGUSTUS gene 27133 30411 . - . ID=g7659;Name=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS mRNA 27133 30411 . - . ID=g7659.t1;Parent=g7659;Name=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 29860 30411 . - . ID=g7659.t1.exon1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 29860 30411 . - 0 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 29562 29719 . - . ID=g7659.t1.exon2;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 29562 29719 . - 0 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 29219 29375 . - . ID=g7659.t1.exon3;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 29219 29375 . - 1 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 28673 28806 . - . ID=g7659.t1.exon4;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 28673 28806 . - 0 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 28157 28416 . - . ID=g7659.t1.exon5;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 28157 28416 . - 1 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 27763 27932 . - . ID=g7659.t1.exon6;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 27763 27932 . - 2 ID=cds.g7659.t1;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS exon 27133 27417 . - . ID=g7659.t1.exon7;Parent=g7659.t1 NODE_74_length_44472_cov_39.4999 AUGUSTUS CDS 27133 27417 . - 0 ID=cds.g7659.t1;Parent=g7659.t1 #PROT g7659.t1 g7659 MADATTPRGATPVKRARNSDEIHTDEEGCDTDGGTPVLRRILGGIQGAIAPQNLLQRQADAALHAKNKLFNDPVHGHIEVDGLCVRIIDTRQFQRLRDIKQLGACYFVFPGGCHNRFEHSIGVSHLAGKMIETLRSKQPELDITNQDVLCVKIAGLCHDLGHGPFSHMFDGYFIPLATGNTDWKHEDASIMMLDHLISENHLMSDFAERGMGKDDIAFIKELIVGKKGANRSEALARRTAGKDFLYEIVANKRNAIDVDKLDYFARDCQYLGMKATYDHSRIIMNARAVKCDGDVYQICHPAKEDWQLYEIFHTRLSLHKRAYQHRVAKIIEYMICDALLLANPYLRFPCADGKTCRLSESIYKPEAYSFITDSVLILIRMSTDPRLDPAKAILRRIDTRDLYRFVGMGLPKRAYDHDDLETIREQIATAVDGVDQRDLVLHIVDFDYGMKDRNPIDFVRFYSKRRMDTADTIKKETVSVIGVPHQFREQQLRVYCKKSDTLSTQRAAQSFRKWARKTGALERDIDYMDVMTPQVSMAASTFAQANAQANATDDEERPGKRRNIAPELDAS* # ORIGINAL: g6135.t1 original gene structure, not modified by PASA NODE_2779_length_5145_cov_41.5371 AUGUSTUS gene 215 1552 . + . ID=g6135;Name=g6135.t1 NODE_2779_length_5145_cov_41.5371 AUGUSTUS mRNA 215 1552 . + . ID=g6135.t1;Parent=g6135;Name=g6135.t1 NODE_2779_length_5145_cov_41.5371 AUGUSTUS exon 215 1552 . + . ID=g6135.t1.exon1;Parent=g6135.t1 NODE_2779_length_5145_cov_41.5371 AUGUSTUS CDS 215 1552 . + 0 ID=cds.g6135.t1;Parent=g6135.t1 #PROT g6135.t1 g6135 MSFTLLPIEIVVVHIVAFLPNWDRVSLARVNSQLRKWLRSTSCCYTLTPNNALKYYQSAAFRVAVLKVFPKHRLVMAEQRQMGNVDVSLFEGIHTLTLSNCKGVTDVSALGSLHALNLSDCEEVTDVSALGGVHSLTLSRCKGVTDVSALGGVHTLTLSYCKGVTDVSALGGVHSLTLFDCGKVTDVSALGGVHMLNVSFCEKVTDVSALRSVHTLTLLCCKGVSDVSALAGVHFLNLSGCKGVTDVSALGGVHTLTLSHCKGVTDVSALGGVRWLDLSGCEWVRDVSALGGVYSLNLCECRRVTYVSALGGVHSLCLSGCEGVTDVSALGGVRILDLTRCNGVTDVSALGGVHTLDLSYCYAVTDVSALGGVHILDLSRCNGVTDVSALGGVRVLNLSYCNGVTDVSSLGGVLWLSLYCCFRVTDVSALDDVPTLIRPLRGVRK* # PASA_UPDATE: g5766.t1, single gene model update, valid-1, status:[pasa:asmbl_6434,status:12], valid-1 NODE_3704_length_2919_cov_42.3245 . gene 322 1256 . - . ID=g5766;Name=g5766.t1 NODE_3704_length_2919_cov_42.3245 . mRNA 322 1256 . - . ID=g5766.t1;Parent=g5766;Name=g5766.t1 NODE_3704_length_2919_cov_42.3245 . five_prime_UTR 1165 1256 . - . ID=g5766.t1.utr5p1;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . exon 1072 1256 . - . ID=g5766.t1.exon1;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . CDS 1072 1164 . - 0 ID=cds.g5766.t1;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . exon 636 964 . - . ID=g5766.t1.exon2;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . CDS 636 964 . - 0 ID=cds.g5766.t1;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . exon 322 488 . - . ID=g5766.t1.exon3;Parent=g5766.t1 NODE_3704_length_2919_cov_42.3245 . CDS 322 488 . - 1 ID=cds.g5766.t1;Parent=g5766.t1;3_prime_partial=true #PROT g5766.t1 g5766 MVVSSRTAALGAGIVVFVAAAYRIWSDSKYRNESTKHTAKVEISPGKILIKNPEAVREKISSIIDGGPDDLLVISDFDMTLTKFMVDGKRGMSTHGVIEKSSNVLPEEYGVLAKALFEKYYPIEVNPKLSPEEKADMMEEWWNEAHKLLIRYGLKWSDIPRAVTAASVGFREGCTEFFDTLHDLDVSLLIFSAGIG # ORIGINAL: g5788.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 5117 11123 . + . ID=g5788;Name=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 5117 11123 . + . ID=g5788.t1;Parent=g5788;Name=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 5117 5145 . + . ID=g5788.t1.exon1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 5117 5145 . + 0 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 5291 5544 . + . ID=g5788.t1.exon2;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 5291 5544 . + 1 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 5658 5922 . + . ID=g5788.t1.exon3;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 5658 5922 . + 2 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 6170 6395 . + . ID=g5788.t1.exon4;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 6170 6395 . + 1 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 6578 9925 . + . ID=g5788.t1.exon5;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 6578 9925 . + 0 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 10065 10231 . + . ID=g5788.t1.exon6;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 10065 10231 . + 0 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 10322 10490 . + . ID=g5788.t1.exon7;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 10322 10490 . + 1 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 10650 10803 . + . ID=g5788.t1.exon8;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 10650 10803 . + 0 ID=cds.g5788.t1;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 10942 11123 . + . ID=g5788.t1.exon9;Parent=g5788.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 10942 11123 . + 2 ID=cds.g5788.t1;Parent=g5788.t1 #PROT g5788.t1 g5788 MDNFGTLQIESSYGYNGARAHSVGKDTVAYACGSNVKFVKLRNGDESILRGLGTGIGPIAANRPLKVFAYAERQLKPRIYVFRYPELIRLKCLQDGTELEYTDLAFSRDGTLLASLGDLPDYTLTVWDWARESVFASISLADTPCRHLSFNPANMKELCASGNGRMVFFRMERSNEQHSLAPVYGKVDGREDLLFETHTWAPQNKVLGGCASGEIVSFDAANGDGRVIVRPADGSAGLAPGCADCIVATKDYIIVAGKDGLVRFLEARDPSKLADTVEFVGPVTCISATDDFGHLLVGSSSGRLAIVQSQGAHGTRTPKTIADCHRGAVASLAVASNGSWAASCGSFGDVRVWGLTSKGLQASVTPAARATCIASHPLAELLAVGGADGCLRVYAMADPTSPRLVHVSHLHEGPIRAVNIDERGRNIITGSNDGRVFLVDAQPPFAVRCYLAVREPVVAIASAALGEWSASVTRVVVATQNPTSIGYNVHGGQVISADIPEVITPQIARRDDPVNLLKIVDRAVSRVGMEIPLVATGIALVPPSVCEKQNNVYVLSKDRRMNVFRLPSVDEMMSMARGPVSSIATVSGHDKGGGFITIAPHHDWIASAAPDGCVAIRLPESPDRVCRTEAHDYRDGGACAVGLTPDHSRIVSAGVDGVVTVWRWQLSDKGHKAMDVVAAAAKESAQMNSSMSSHIENALASRNTVTESADAPPKLELELALAEVHRAIDANFRDARTTVDEAVSSLQSRLQDLIAKNCQVPEIERLARDEFTLDADLVERMRTETEAAVARVRDDVGYENLSRMFLRDLLKEECWDSMESAGKSLRGFARQLEVSNYPMRMRSREEIQTIDYVKTMRKIEVAETEARRPIEAALLPAEDHGDSGLRNGSNNAIGYDHDDADGQDEGLGDDSTFEGDLKADFLYNPFSLYTAQRKRTQIILLRDVLHTVKGEFNREFEGVLRQKESEIGKIKERNDRIAHIMRELDTIEELLTPKMADVEQPERLLTVTEDEITVEKYISPEERARLAEQQRLEEERLRLERGDNAKERALDLMMGGRLDAADDDELLQELVRPEWMNRSEQEMTEDEIKALREFEKKENTMREEREKRRKALETELKKLQAATLEGCTAFDDRLQELFKKRIDIEKVVYRQELKIVRLEEALLLEEQIDERAVKLSLTLEEKKLAKAQSAAAVTMLRREVEACKDAHEAAAADDKSIERQFRREIADPNESQADTLLRLFRRRQKDNAKANGLQQRQQASHDADQLDPFAYVDAAGADLQREADVSIDMPSGMDPQVYERLIEFRGKKIEAEAEMRRRAAALAEIAQFLQRREAEDEKLRVDIEDLLRELKALEDERVKITRNLEVLFLLKQGQVEVEQSTLFPDFSDSLLIHRSVVEELNAAIVALGQHKVEGLKDMKEFRKGIRLLEWENTRLQMVAEDLVTKTRNVQLLRVTKQLQQIIKDGTMEHHAAEVAKLEKQLDHTKQSHEHKMEERQKALRKIRRLISKKRDENSQLAVGVRDLESAVDERRALHQVQAERSSTRGPGKRLKDIAARRRLVDLAKTRGDEISVLREEVERLRMRTFPSFGRQPPSHIV* # PASA_UPDATE: g5793.t1, single gene model update, valid-1, status:[pasa:asmbl_5412,status:3], valid-1 NODE_300_length_27673_cov_41.8908 . gene 22953 23785 . + . ID=g5793;Name=g5793.t1 NODE_300_length_27673_cov_41.8908 . mRNA 22953 23785 . + . ID=g5793.t1;Parent=g5793;Name=g5793.t1 NODE_300_length_27673_cov_41.8908 . five_prime_UTR 22953 22982 . + . ID=g5793.t1.utr5p1;Parent=g5793.t1 NODE_300_length_27673_cov_41.8908 . exon 22953 23052 . + . ID=g5793.t1.exon1;Parent=g5793.t1 NODE_300_length_27673_cov_41.8908 . CDS 22983 23052 . + 0 ID=cds.g5793.t1;Parent=g5793.t1 NODE_300_length_27673_cov_41.8908 . exon 23186 23785 . + . ID=g5793.t1.exon2;Parent=g5793.t1 NODE_300_length_27673_cov_41.8908 . CDS 23186 23580 . + 2 ID=cds.g5793.t1;Parent=g5793.t1 NODE_300_length_27673_cov_41.8908 . three_prime_UTR 23581 23785 . + . ID=g5793.t1.utr3p1;Parent=g5793.t1 #PROT g5793.t1 g5793 MRLLSSFVGPLLRGIPSAALRHTAGTSRVIASTICANASRTFTSRVNVTDTARLGLVARPCLTATRATIGSPCVSLISVRMYKPRPVKKKYKLKTNKSAYKRFRRTQSGLFKRWRSGTQHNMSSKTNAQKRRLRKPAYLSRTHTKLLKKLCPYL* # ORIGINAL: g5786.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 202 3198 . + . ID=g5786;Name=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 202 3198 . + . ID=g5786.t1;Parent=g5786;Name=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 202 553 . + . ID=g5786.t1.exon1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 202 553 . + 1 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 755 1052 . + . ID=g5786.t1.exon2;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 755 1052 . + 0 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 1262 1284 . + . ID=g5786.t1.exon3;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 1262 1284 . + 2 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 1406 1556 . + . ID=g5786.t1.exon4;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 1406 1556 . + 0 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 1860 1920 . + . ID=g5786.t1.exon5;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 1860 1920 . + 2 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 2048 2201 . + . ID=g5786.t1.exon6;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 2048 2201 . + 1 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 2341 2805 . + . ID=g5786.t1.exon7;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 2341 2805 . + 0 ID=cds.g5786.t1;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 3064 3198 . + . ID=g5786.t1.exon8;Parent=g5786.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 3064 3198 . + 0 ID=cds.g5786.t1;Parent=g5786.t1 #PROT g5786.t1 g5786 NPIVLTDDSPDSVPRLRRSSRRVLKPSPPSISDSYAVIVGTHQRKAGLFDAQAKLDKLMREARIAQQLKKINEKNNADALQSDSDSDSDDENGRRSALGDDAVVEDDAHRERLARLLKDREDQDALALLRHECVFGDVDVQSTLPIWRPCSIEGVFITDRQIETVLGTTTARLLRDCTAPKADPTMLEECAGGNFLRDILLLTSCRPLFANWMFDIDLVAMVPEKITWVPTLSDFVRAFLAMGASAESLSANGALSPMLSITNEHMNVPAPFLQGFRMHNYNCTIRLLSAFVKHRRTQFRATDLATLFLLVIRSTLDEKTLPSLTVSTTCLALLLEAIPCDEWFDMVDVICEGLVRVSDRHENLVHAVQLLTPTSRGMHIQRRATFAMMHALSTRLCTNRPQNAPIDLEGESQDTAMGESEGGLPVAVAGAAADFDSAVRMALALWPRERETLEKDVVRHCSRLIQTMSIDDDTDYSLLHSWVCLSTMCISPEYKTPAEVQKPYVENFSTLISRLGHRIKDPRGHFLTRSKACWNNHRFCVILAV* # ORIGINAL: g5794.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 23978 26419 . - . ID=g5794;Name=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 23978 26419 . - . ID=g5794.t1;Parent=g5794;Name=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 26272 26419 . - . ID=g5794.t1.exon1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 26272 26419 . - 0 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 25929 26017 . - . ID=g5794.t1.exon2;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 25929 26017 . - 2 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 25618 25716 . - . ID=g5794.t1.exon3;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 25618 25716 . - 0 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 25119 25301 . - . ID=g5794.t1.exon4;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 25119 25301 . - 0 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 24840 24943 . - . ID=g5794.t1.exon5;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 24840 24943 . - 0 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 24465 24621 . - . ID=g5794.t1.exon6;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 24465 24621 . - 1 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 24160 24238 . - . ID=g5794.t1.exon7;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 24160 24238 . - 0 ID=cds.g5794.t1;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 23978 24042 . - . ID=g5794.t1.exon8;Parent=g5794.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 23978 24042 . - 2 ID=cds.g5794.t1;Parent=g5794.t1 #PROT g5794.t1 g5794 MRVVSTVPTEHEDIIHDTAYDFYGKRMATCSSDQKIKASKCGVFVTRQDEFGQVIASCSFDRTVFIWEEQSTEHSSKAKCSTTEWVRKASLVDSKDSVRDIEFAPKHLGLKLATCSADGFIRIYEANDVMNLALWPLMEEFESRKGGCNCISWNPSRFHPQMIAVGSDDSEVKIWEYNDASRKWIKIESLIGHNDAVHDVAFAPNVGRTYHLLATCSKDRTVRIWTLTPRQAPDATQAPAQSGSLLDVQQVAVFEDHDAEVWRVEWNITGTILASSGDDGMVRLWKLTYLDTWKCIAAIRGDEEAAE* # ORIGINAL: g5792.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 21217 22632 . - . ID=g5792;Name=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 21217 22632 . - . ID=g5792.t1;Parent=g5792;Name=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 22450 22632 . - . ID=g5792.t1.exon1;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 22450 22632 . - 0 ID=cds.g5792.t1;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 22125 22323 . - . ID=g5792.t1.exon2;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 22125 22323 . - 0 ID=cds.g5792.t1;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 21753 22030 . - . ID=g5792.t1.exon3;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 21753 22030 . - 2 ID=cds.g5792.t1;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 21399 21590 . - . ID=g5792.t1.exon4;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 21399 21590 . - 0 ID=cds.g5792.t1;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 21217 21291 . - . ID=g5792.t1.exon5;Parent=g5792.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 21217 21291 . - 0 ID=cds.g5792.t1;Parent=g5792.t1 #PROT g5792.t1 g5792 MENSVERRLEASVNPTTADADEADNGTAKSATEASAQSRVTARQLERMERNRLKAIQLRESRIVNAARLETEGPAESKSGASATVAVVAPRPSRPMDTRAGFIPPEYDDDFDANDEAHKPPVVVEEELPEMGREHFRCESCNQRFYDSLLSSKYRVLVCTSCYEAGREGKYAFVTKSEAKTDYLLNDDDLDGGENSLAFILRKNPRNPHWNEMRLYLRCQVEDRSFSRWGGEDGLDQEIDRREAERAATKKRKHEAKIKLLRRNVRTSTWMKDKEDHRHVFTTEEFDEATGKGVRTCDCGHEVEFERI* # ORIGINAL: g5787.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 3705 4681 . - . ID=g5787;Name=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 3705 4681 . - . ID=g5787.t1;Parent=g5787;Name=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 4652 4681 . - . ID=g5787.t1.exon1;Parent=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 4652 4681 . - 0 ID=cds.g5787.t1;Parent=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 4115 4542 . - . ID=g5787.t1.exon2;Parent=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 4115 4542 . - 0 ID=cds.g5787.t1;Parent=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 3705 4023 . - . ID=g5787.t1.exon3;Parent=g5787.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 3705 4023 . - 1 ID=cds.g5787.t1;Parent=g5787.t1 #PROT g5787.t1 g5787 MAHVSRITGRAATGLRVHARWLSTERVENKGRDAAPQLNENASEESDATSDFAKGFFSRLQRAVVDEDKKPAPELVFGLRQKDYSTELQDNLKLMQRRNRERERVDAEILRKREAERMIEYRLAMASAASKEAVKAASAADGPTKGNISGGYEHESYKSGTGREFSPFLLLLALPAFYLFGVVILAGRDESTRKWVEDNVPMIGRSMANQARPTAKGTVIKPEILASLGYKDGDIGKFSSAKEELAFVEAAIESIEGR* # ORIGINAL: g5791.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 17551 20781 . - . ID=g5791;Name=g5791.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 17551 20781 . - . ID=g5791.t1;Parent=g5791;Name=g5791.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 17551 20781 . - . ID=g5791.t1.exon1;Parent=g5791.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 17551 20781 . - 0 ID=cds.g5791.t1;Parent=g5791.t1 #PROT g5791.t1 g5791 MVISCHCNERRWCACTVVDPVVGNGGDAHGLRPCACSCGNCKCNDAIKLFMVGSRSVVFVRIEGMRQGIVPKAVKDALLEFSEVRHVRAAAVDGELHVYVSGKSNADLDEKIVAKIMSTGCKASLIDPATRTSVEHEMFMDIPDDDVAEKKKESGGCCAPREAVDNEVVSEKMAAMAVVEGVMRTTLSVVGMTCASCVATIERQLKQQKGVLSVSVSLLTERCTVDHDASIVSPKEIKTFIYDLGFDAEVLNLPPAALSDTTLIIEGMTCASCVSAVEAKLSATMGIVSASVNLIAGKCAVRYDPSVVGPRDIICIVEDLGYGAELDSGEMSVGDTSRQDAEIASQRRLFFISLALVIPIFFISMVFPYIPSVEHVFKTEITSGLTVMSFTLFILTTPIQFGVGARFYIGAFKSLRHGVANMDVLVAGGTSAAYFYSIVTIALAMANPHYEAMEAFEISALLITFILLGKVLELLAKRKTSAAIRKLMDLQPGTAILLSVDDATGKVLSEKEILSKLVQRGDLLKVLPGAKVPADGVVVYGQSHVDESMITGESLPVHKMAGADVTGGTVNREGVLHVRADRVGADTVLSQIAKLVEDAQSSKAPIQALADKISRVFVPTVIAISLAVFLLWIALNYTVVSDSFLPKATGRFLFAFLVFISVLVVACPCALGLATPTAVMVGTGIGARNGVLIKGGEPLQTAHSVNAIIFDKTGTLTHGKPVVTDVIMAKESTLSRIEFMAIVGAAEQNSEHPLGKAIYNAAVQECSAADGSPASFAEASSFEAVPGRGLKCTIDGRAVFVGNRAWMVENGCDVDAHLEEAMKELELTGKTAMLTAVGGSVVGVVAVSDTLKPESRAVVRELRNRGVTVWMVTGDNARTAHAIAAQAGIVDVFAEVLPGDKALRVRELQDSGRVVAMVGDGINDSPALAAADVGIAIAAGTEIAIEAADIVLMRSDLRDVITAIDISRKTFNRIILNFAWAFGYNLLAIPIAAGAFYYWWRALMPPWVAGIAMAFSSVSVIASSLQLNFYTKPVIRIDEDDASGAPSASVQSGVAQPRPSAVGGPIGELVVDETVC* # PASA_UPDATE: g5789.t1, single gene model update, valid-1, status:[pasa:asmbl_5410,status:3], valid-1 # PASA_UPDATE: g5789.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5411,status:3], valid-1 NODE_300_length_27673_cov_41.8908 . gene 11262 13517 . - . ID=g5789;Name=g5789.t1 NODE_300_length_27673_cov_41.8908 . mRNA 11262 13517 . - . ID=g5789.t1;Parent=g5789;Name=g5789.t1 NODE_300_length_27673_cov_41.8908 . five_prime_UTR 13432 13517 . - . ID=g5789.t1.utr5p1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . five_prime_UTR 13280 13346 . - . ID=g5789.t1.utr5p2;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . exon 13432 13517 . - . ID=g5789.t1.exon1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . exon 13225 13346 . - . ID=g5789.t1.exon2;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . CDS 13225 13279 . - 0 ID=cds.g5789.t1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . exon 12608 12892 . - . ID=g5789.t1.exon3;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . CDS 12608 12892 . - 2 ID=cds.g5789.t1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . exon 12042 12331 . - . ID=g5789.t1.exon4;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . CDS 12042 12331 . - 2 ID=cds.g5789.t1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . exon 11262 11739 . - . ID=g5789.t1.exon5;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . CDS 11494 11739 . - 0 ID=cds.g5789.t1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . three_prime_UTR 11262 11493 . - . ID=g5789.t1.utr3p1;Parent=g5789.t1 NODE_300_length_27673_cov_41.8908 . mRNA 11262 13517 . - . ID=g5789.t1.1.5b6be70b;Parent=g5789;Name=g5789.t1 NODE_300_length_27673_cov_41.8908 . five_prime_UTR 13432 13517 . - . ID=g5789.t1.1.5b6be70b.utr5p1;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . five_prime_UTR 13225 13346 . - . ID=g5789.t1.1.5b6be70b.utr5p2;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . five_prime_UTR 12420 12892 . - . ID=g5789.t1.1.5b6be70b.utr5p3;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . exon 13432 13517 . - . ID=g5789.t1.1.5b6be70b.exon1;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . exon 13225 13346 . - . ID=g5789.t1.1.5b6be70b.exon2;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . exon 12042 12892 . - . ID=g5789.t1.1.5b6be70b.exon3;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . CDS 12042 12419 . - 0 ID=cds.g5789.t1.1.5b6be70b;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . exon 11262 11739 . - . ID=g5789.t1.1.5b6be70b.exon4;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . CDS 11494 11739 . - 0 ID=cds.g5789.t1.1.5b6be70b;Parent=g5789.t1.1.5b6be70b NODE_300_length_27673_cov_41.8908 . three_prime_UTR 11262 11493 . - . ID=g5789.t1.1.5b6be70b.utr3p1;Parent=g5789.t1.1.5b6be70b #PROT g5789.t1 g5789 MAARSFLSRFRLRLPSAQAYLSHPSPPIQQLGWASTSPSIGSFSFRAPHIAPTPFQLVAASGRRTLATLIEPSGHSLLTRSILKPMTFSRVVARAFGGRLVSGAAAVGLAACLSFARSNGIYARESEATRDTHTTIQHEDGILSDRNAIVSRTSVASVLMAPLCVADELNAVRVERRVLSDRVASLKASESSLRAGAVAASDTIRTLQSEIDALRSQLDAERKRFRDREKNLECALHDACAASSCVVCLDEPRNVVFECGHHVACEGCSERLSRCPMCRSDIGQRFVHYVT* #PROT g5789.t1.1.5b6be70b g5789 MPSDLQFLFLYLPQYSFPLSIVLFATNTAAFARSNGIYARESEATRDTHTTIQHEDGILSDRNAIVSRTSVASVLMAPLCVADELNAVRVERRVLSDRVASLKASESSLRAGAVAASDTIRTLQSEIDALRSQLDAERKRFRDREKNLECALHDACAASSCVVCLDEPRNVVFECGHHVACEGCSERLSRCPMCRSDIGQRFVHYVT* # ORIGINAL: g5790.t1 original gene structure, not modified by PASA NODE_300_length_27673_cov_41.8908 AUGUSTUS gene 13976 16920 . + . ID=g5790;Name=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS mRNA 13976 16920 . + . ID=g5790.t1;Parent=g5790;Name=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 13976 14050 . + . ID=g5790.t1.exon1;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 13976 14050 . + 0 ID=cds.g5790.t1;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 14187 14557 . + . ID=g5790.t1.exon2;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 14187 14557 . + 0 ID=cds.g5790.t1;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 14738 15302 . + . ID=g5790.t1.exon3;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 14738 15302 . + 1 ID=cds.g5790.t1;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS exon 15565 16920 . + . ID=g5790.t1.exon4;Parent=g5790.t1 NODE_300_length_27673_cov_41.8908 AUGUSTUS CDS 15565 16920 . + 0 ID=cds.g5790.t1;Parent=g5790.t1 #PROT g5790.t1 g5790 MLRAAPRVRQLLSARSQRVVSVGGRRCFADIKGPKSTGVPSAKPQSSSKDAPKSVADVLKGGKVQGATEIKRQPTTAAAAASTNAATNTGVKSTGSSATSSAPQQQGTSSAAPAASETKPADVTAPTATATPTPSPSSVVDAKDDRPLRVTYRHEQEREQSSGSGAPTAIIGGAVAVAVAGGYLYYKLRDEDFNAWFAKNVPLVGKSVAGAVSVPKKERKAPVTPGAAVATRDSLAVRTPPSTPTTTPAAATATATAASVTATQPKSDSADDETFAGTHLQPVDVDLTESAEESTWTAPSVVAALSEAVEATVAAGALDGPGWHAESGEGASDVAVDESSVEISTALDGPEIVAELEKLQGKTGVSATDAANGDDIYFRPEETSSPAETVSAAVGVLVNGAEHIVDDAVAKLDDVSLPIDAELSSTVAKAVVAGDAEALVGSALSATFPDSIADAHERIALLEYALDEWRHRDEERLARVALQQQEEDASRFKAVLEQQRSAVRVAFEKELDVLRDEFAEAIVRDRAVAESRYGVEMQKVLRRQAALQDSHMRERLTSQEKDLTAKLNAELQERLAEERAVRMQQLETLFGRLKALELVLSQEVNEGLIRGRAHQLWLAARALSYAARVGDPARMKAAVRALNAAGQDDEAVVVALANFPKEAFDRVIPSEDDLRRRFADVKRHAHRASLMPEEGGMVSHALSALLSALLFTPSGPVDGDDTDAILSRADDSLARGDLETAARHVNQLRGWPRKIATDWLKDARARLELAQAVSMVDAEVTLKATAMS* # ORIGINAL: g9650.t1 original gene structure, not modified by PASA NODE_5203_length_970_cov_51.0492 AUGUSTUS gene 1 864 . - . ID=g9650;Name=g9650.t1 NODE_5203_length_970_cov_51.0492 AUGUSTUS mRNA 1 864 . - . ID=g9650.t1;Parent=g9650;Name=g9650.t1 NODE_5203_length_970_cov_51.0492 AUGUSTUS exon 1 864 . - . ID=g9650.t1.exon1;Parent=g9650.t1 NODE_5203_length_970_cov_51.0492 AUGUSTUS CDS 1 864 . - 0 ID=cds.g9650.t1;Parent=g9650.t1 #PROT g9650.t1 g9650 MVAAATTIQSAFRRHVSRAHFLALRKSCICIQATVRGIIARKAFFEKRAGAIIIQSAYRAYTARRNFALLRGAAIVVQRRYRATLAMRAQSALYKTSVAAIVKLQAIVRGRAARRVFATTKTAAITIQAAYRRHAARSMYVALQRAAVVVQRRYRAVLVMRLQQCSYAQTVASIVRIQSLVRGRIARNMFVSAKKAAVVIQSAFRAHIASKKYAMLRSTAIAMQRRFRATVAMRKEMAAYKKTVASIVVLQSLVRGRIAHKAFVAQKAAAITIQSAFRAHIARSAYAL # PASA_UPDATE: g5410.t1, single gene model update, valid-1, status:[pasa:asmbl_6732,status:3], valid-1 NODE_3921_length_2507_cov_40.7816 . gene 144 1850 . + . ID=g5410;Name=g5410.t1 NODE_3921_length_2507_cov_40.7816 . mRNA 144 1850 . + . ID=g5410.t1;Parent=g5410;Name=g5410.t1 NODE_3921_length_2507_cov_40.7816 . five_prime_UTR 144 601 . + . ID=g5410.t1.utr5p1;Parent=g5410.t1 NODE_3921_length_2507_cov_40.7816 . exon 144 1850 . + . ID=g5410.t1.exon1;Parent=g5410.t1 NODE_3921_length_2507_cov_40.7816 . CDS 602 1828 . + 0 ID=cds.g5410.t1;Parent=g5410.t1 NODE_3921_length_2507_cov_40.7816 . three_prime_UTR 1829 1850 . + . ID=g5410.t1.utr3p1;Parent=g5410.t1 #PROT g5410.t1 g5410 MDGNTGAFGAVGAARDIRNPIKAARVVMSGDAEGLGPLGLVRPILVVGEGAVAIAREAGLETNETGGADFLVTERARSAHALWNAKVNDRMLQLKLEQRAHNKQDVACLPQHDADELDMPRKRVRKNIVTGNNLHAPPASSLDSIDAGESNLSDTVGAIVIDVGRMLVATGISSGGALLKPAGRVGDAALYGCGCHADVYRTLCGDITPRDRVEDHGAGECGNAMPRAVAAACTSGTGEHIMRCNLASAAVDKLLCECVAGDQSPPDVLRSCVESTLLRVRIPGVVNAKRMGGIIAAIASAVDHEHCGETGVARLGDAIDLCADNKERNEGHTGSADAEMCSVCRAGPGARPVCVDIVWAHTTPSMVVGFRATGGPTLSKANVSVSRMSSAGPSAGKAVVVSGICLHL* # ORIGINAL: g13604.t1 original gene structure, not modified by PASA NODE_2213_length_7231_cov_50.328 AUGUSTUS gene 4644 6811 . - . ID=g13604;Name=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS mRNA 4644 6811 . - . ID=g13604.t1;Parent=g13604;Name=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS exon 6103 6811 . - . ID=g13604.t1.exon1;Parent=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS CDS 6103 6811 . - 0 ID=cds.g13604.t1;Parent=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS exon 5197 5502 . - . ID=g13604.t1.exon2;Parent=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS CDS 5197 5502 . - 2 ID=cds.g13604.t1;Parent=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS exon 4644 5098 . - . ID=g13604.t1.exon3;Parent=g13604.t1 NODE_2213_length_7231_cov_50.328 AUGUSTUS CDS 4644 5098 . - 2 ID=cds.g13604.t1;Parent=g13604.t1 #PROT g13604.t1 g13604 MKWVSSQEECFTALTRPQQQLQLAISTKGSAAKDLRQQPKPAGQSLVSEAVKELHKLPLSSVEEKVAGGGLLPQRDDGSEALKSNVDESNVVNCPCTVVLTYPACLLDSIEEGAGETYALQWKGLQKDLLNETRFGQLAKLIPSRPLFAAEVAPALVIADPPYGLNVEPWDKVSVTAAQWSNFWRHITDSFPPGETRTTVVIFHATQDGGVLHSSAAKRGWTVDHAVWLKPGSNNGGSSTTAVAAALLGRSCISVELDGDQLSFTAGRLQQLNDVFEAASDRDSLLSTLQQSLAPASFPDKFSLVRPSSFDKWPTKYNNIHSNKEVDVVEEVEAESNQASGTASTTDVPHGGKRGLEDSSTPLWKTRKSNGNTTTEADMPFKSGNVRVPEDTAGDEDSGSGAATGAATQKNTTHKAVGKRAVEDTDTLAAAAKKPKPAKGGTSNYNHSLIMFMSEMLCQSHYRLTAPKPGTIAYILEQGRRQREQSAAK* # PASA_UPDATE: g13603.t1, single gene model update, valid-1, status:[pasa:asmbl_3787,status:12],[pasa:asmbl_3788,status:12], valid-1 NODE_2213_length_7231_cov_50.328 . gene 282 3547 . + . ID=g13603;Name=g13603.t1 NODE_2213_length_7231_cov_50.328 . mRNA 282 3547 . + . ID=g13603.t1;Parent=g13603;Name=g13603.t1 NODE_2213_length_7231_cov_50.328 . five_prime_UTR 282 362 . + . ID=g13603.t1.utr5p1;Parent=g13603.t1 NODE_2213_length_7231_cov_50.328 . exon 282 2269 . + . ID=g13603.t1.exon1;Parent=g13603.t1 NODE_2213_length_7231_cov_50.328 . CDS 363 2269 . + 0 ID=cds.g13603.t1;Parent=g13603.t1 NODE_2213_length_7231_cov_50.328 . exon 2431 3547 . + . ID=g13603.t1.exon2;Parent=g13603.t1 NODE_2213_length_7231_cov_50.328 . CDS 2431 3487 . + 1 ID=cds.g13603.t1;Parent=g13603.t1 NODE_2213_length_7231_cov_50.328 . three_prime_UTR 3488 3547 . + . ID=g13603.t1.utr3p1;Parent=g13603.t1 #PROT g13603.t1 g13603 MEELHGELRSGAAPCVPVTVLVKTSATWTLREWTHVVQALKIRCSGRTEHASVDYANALAIGSACVAVFLQPHPALVQMSTELLDAAMSDETSRLEHAVDALGKQLDAIACDFGVGHAQTAAVLERVVRIARGAHMIRDVIASVAHSVRARLIATLSEAHAHIFADSLVAEHITCTVSGNATELLNRPSTTNGRIDRDVQRAVATHFRRATQSLTQPSRTELDSGMFENASRLLPVVVFAVVPDLLATNRGSASQGCTDERGTATGSPHPLPPGEEVAAYFAACVGARSVEVWGADDMRLFTARTPSQFPQTSRLLCYLDYREAKEIATCDADIVHPACIDVLLISNIPLLIFGVSHLFQYNEGTHIGGRLLAGCSRDDDAATPVFYSGVKAVRVQRAITLVSMATIDMWRTIGFLSRIFACFERMRVSIDLVSTSETNVTVSLDAVANAVDPRRMAELLRELNQHCRVTVIEPCAVISLIGCGVGACHEGLAVAARLGAHVYLVSKSADDVSLSMVVDEHNGLPLEAALHDVFFGEINASTATFGPSYSDLEHFERPGAQQRTPFVNGASATWWRDRADEIVRTAPADSPLYMYNVPTLIAAADQLTSTLKSVDRFFFAVKANPNPDILRILKDRGFGFECVSLGELQLASAILGSRSSMVQHRILFTPNFASRLDYETAFASGCHVTVDGLFPLERWPGCFANRSIILRVDANNGRGHHSKVVTAGGNSKFGIPVAQMQRCADLCKQARVCVIGLHLHAGSGVISTPNVWGDTLSLLRHISREHFGNSVQIFNVGGGLGVPDKPSVRPIDLTAVEQELAASRSDTLFDTNVPFECKTSNSQPSFEVWMEPGRYLVAECGVLLCRVTQTKDKGESGRRYVGVNAGMNALIRPALYGSHHAIVNASRVLPSGEYAPQPMSVFDVVGPICESGDVLGTSRALPAATREGDVFVIECTGAYGRSMASTYNLRPIPDEVIVGLTEAKMLP* # PASA_UPDATE: g11206.t1, single gene model update, valid-1, status:[pasa:asmbl_5558,status:12], valid-1 NODE_30_length_59095_cov_42.1109 . gene 38217 44164 . + . ID=g11206;Name=g11206.t1 NODE_30_length_59095_cov_42.1109 . mRNA 38217 44164 . + . ID=g11206.t1;Parent=g11206;Name=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 38217 38323 . + . ID=g11206.t1.exon1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 38217 38323 . + 0 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 38453 38630 . + . ID=g11206.t1.exon2;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 38453 38630 . + 1 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 38738 39019 . + . ID=g11206.t1.exon3;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 38738 39019 . + 0 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 39115 39315 . + . ID=g11206.t1.exon4;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 39115 39315 . + 0 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 39461 39562 . + . ID=g11206.t1.exon5;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 39461 39562 . + 0 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 39644 43836 . + . ID=g11206.t1.exon6;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 39644 43836 . + 0 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . exon 43936 44164 . + . ID=g11206.t1.exon7;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . CDS 43936 44131 . + 1 ID=cds.g11206.t1;Parent=g11206.t1 NODE_30_length_59095_cov_42.1109 . three_prime_UTR 44132 44164 . + . ID=g11206.t1.utr3p1;Parent=g11206.t1 #PROT g11206.t1 g11206 MASVSSTGRRQAVPSKTRRVTNFGIDCAETLTWTNWEPGGEYTKKFVIKNVSTTTHKVKYRLPKSHYFSMEYPETIILSAGTSLALPVTFRPMAMEPYNDKIELVTQDGSFTIPITAKIPKHSLACIESLVFGMCPAKETTSKTFALKNTGDLPSHFEWDISSPFAIFPRAGIIEIGASQTMTVKFSPQDASVFDAIAVCKFGGEGTDYPQLTRTLSIEGVGKYPFLDVFPRVLDFGQAYVGQPTERSFRLKNTSQVLASYRISSTDGDGAFIPSLNHGTLLPGAEVDVAVTFSPEAPHAERTENFEIVMPSGRAQPVACRGAAMGPSVSLLRESDKDATDTSSEERRDAGDAVVITFKDVALGGVAQQVVHLENTSGTPASFQFVAQSGGVFDIDTLCGTLPARSSKAVQITFRPPKAINYYRRVYCLVQHQQPLAMDLIATCFSQEWRPHDFRRKHLVNYRRRCAAGLGLFSPEQLTDLLDHGRVALGPDQLELLPTPAMPDSLLAYDVAFPGPAREDGMFTQFYRDASLEGFRPVTIDEPQIDFGACRVLRIVDKRIMRVTNNTRGVMICAWMVRRKDRTAEKAPMDDVFVIEPSEQEIGPGESCIFKVGFNPQVANQFYGIEVEGYAYFRSMRTFRLVNDATFTPPWCVTAKFTGHTFPSGVDSFVPKVTIDASVVSFTECIAGDTLYRTVVMRNEGDTPSKYELEDSAAHAHGFSVQPRRGILQPNQWQLLAFRFTPTEARRTEDTIRCRLNDSAANVMNVEVNGTAHSPSINLEAAGAVYFKPTCMGGKSTRQLSIKNTSAVPTRFRWVIPRHLAHVLSVTPAEGVMQPRECQTHLWDFVPPSEGALAATVSIVLEKFPVGPAYLCRPAVDGGRRKIKLRIVGEGTKGLILADPAVLDLGTVMVNHGATRDISLFNPGDSSLHYELIVDAARSDNGKPACDGGDGGVSGVGVSASDLARMVELSPACGTIGARANVTLRICVRPAEQQMYSFTIKYRLEGSELQPLCDVVAMGVYPTLTVTDCRCPTLSKGRTWKLFSLDRLNHELATSRRPARSPIGRHISFADTHDARAESPTSLALTTGLVAVMASQHSQSACDLNFGPAVVGSDPTMVMVRFENTGMVPVDWSFLFPSNLKVEVDKWAAVEGDPLETQAQQAFAAAEKIFSVKPKSGRLAVGDHCTVMFRYVHGHVGTDRLPVILKLEKGRQIMLNLCGHTLAQNARFLHVPASHHWFYPIAIGDAEPPVQTFELHNAGTMPLDFELDLGNLERVRAENHNFSIFECRSSGGSLRPGDTAVIPWIFRPLEARSYDVDVPVRVVGGESAVVTFSGVGYHPGKGEAKSLLMPGGVPVAQGIPLGRQQVHLSQERVEFGDVPLYARSRRLVFVTNNSKDDAMSFRWVLSHPLAASVLEVTPSSGMLAPGASALCRIVFLSVGRPQLYDFDIECHFDNMTEVNAHRAKVEDVVRKRHDKINDISRTIERSRSPVMRLSLREWLANDMHGDLRMSKYDPLPPIASELPDEPEEILDVTRPRSAHSAQSIEFRRAVVRENPLPTPPKPTILCLGIMARTHVVDHFRDEFAGVASAHFVSSAVLGNARRPVEENALVPATTQPTANIIADVLGMLVREVIGDADFGRALDSMVLEPTPYFKQYAAYRAEAWPSSTSDYEAKRAAEQSIEIKRIKCLPEFQSLAELVLENTLLNIIGEASVGKFQLTVRSRAVAPTATAPATTTLSRGASRITEPRVTRG* # ORIGINAL: g11201.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 10969 12024 . - . ID=g11201;Name=g11201.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 10969 12024 . - . ID=g11201.t1;Parent=g11201;Name=g11201.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 10969 12024 . - . ID=g11201.t1.exon1;Parent=g11201.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 10969 12024 . - 0 ID=cds.g11201.t1;Parent=g11201.t1 #PROT g11201.t1 g11201 MWAAVWTVFSVVYPLVLVTVWVCLLVLIVMMVQEMAGVPLSVWLGYQFHLFNAALTRRISKVSLHADHGATGVATGAAAASPSPLLAATDSALCSGLALQHQHQRGHARRASVGSVCSCCVAAGVPPGVPLPSSASASVSPNSSFRSSPSSSRHLQGKGSRGRILSEPVVVGGPDDWVFVKTAPASTSSAHQQRPGNHGSAASPPLPLRAPSSLQHAAQLCRPHSPSPLLPSASISSSASASASASASARCLTQRRQSSSNLLVASSSHFAQLSHRQRNNSTGGKSASSDNSSDPNDRASSGDEASKRDEGKGSRGKKVRRVLAKFFGEALKMKRTRSLTSIDVLHNNVAG* # ORIGINAL: g11198.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 3454 5796 . - . ID=g11198;Name=g11198.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 3454 5796 . - . ID=g11198.t1;Parent=g11198;Name=g11198.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 3454 5796 . - . ID=g11198.t1.exon1;Parent=g11198.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 3454 5796 . - 0 ID=cds.g11198.t1;Parent=g11198.t1 #PROT g11198.t1 g11198 MAVDVRRLARAVYGYVATKTDELSFDEGATVTIKKSIEGGWWEGEFNGNVGWFPSNYVEEMPAEPAKPQPPAPPPKPTRGASFNAGLVLSTAQLPPAQQHSQAQPSGKPIPPWKPRVSLAGAGGGGGPSMPPVTRNKHQSIMAYQTLVGQEIVDTERKYVKELDDFHDQFVAPLRDSSLLSVESKAHIFGNFDELFRFQRKFLKDLTSAIECDPDSRRIGGFFLASRPLFRQIYGRFSSKHPKAVEILNKYHDNADLCALMERLGSKTKPPTLVLTQAWMKPSQRVKKYVALLKEAVRYTDDDHSDKADVSQALSVYVEIDMYLCEMRRRKEDELMIANSRIEGLDGGELEALGELSLMSYFMVPSKENGPLEERALLLYPQFVIGLAKVTGKGKYDFKLREKLCMKDVTVSAIDDVGNLSNAFEIATPKKTMRVSTHTGSDREQWVSALQSHARKAQNPTPMLEPLTSELREEIVEADSRPKKKKFAIGNLFHKDKEREKDADHNASQLQSSQSASSHYLASSGSVGSRSKSTDLGVPSSASAAPAAPKRSLRSNTMEPKSVLDSSVSPSHQPLGRANTLPLKSTVSQPQAPVFESTTTDAYDVISQYGNMENGSSSSAADSEPLYANLPAPQEAHKRKASLPTSTATMTAATGSTAPIFRGRTNAASIHLNDEEASAAVRDAEQSTLSPLSASSAPASGLTRKPVLKEREPRRSPSFGDVLGVVETLQKQVELLTQEVANLKINLEQERSARESLERIVQHQLGPVPAPRVGLSSRDR* # ORIGINAL: g11203.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 18909 21261 . - . ID=g11203;Name=g11203.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 18909 21261 . - . ID=g11203.t1;Parent=g11203;Name=g11203.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 20586 21261 . - . ID=g11203.t1.exon1;Parent=g11203.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 20586 21261 . - 0 ID=cds.g11203.t1;Parent=g11203.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 18909 20455 . - . ID=g11203.t1.exon2;Parent=g11203.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 18909 20455 . - 2 ID=cds.g11203.t1;Parent=g11203.t1 #PROT g11203.t1 g11203 MASTGSLAFEVQRNKSGYLLSARRSSLSLREPRPDTRTFLDADVIYTRRTILRPVLSKETNLNRLHTLFGDDRTMRFFENGIPFDTSRTVLRMREYAHRWDQGEPSWWIVLSRANKSTVGAVGIKRLMRGRTEHIEVAYLSRPAMHGQMFAFEAALAAHEWYRRCGRSPDAVSVKVTCTIHPENGPSRRLAESIGLEKQPGILEGIYRDPRLVFLLEGTPSHIDKTADYFITQGFKRIDDKLALSLVCLSVGDAPASDSPLCLSPVDAAVAAVECLVCAPGCHSSVRVCATSSAGSDGSDAGRRSSTLRVSPIDVQQQQQQQQQQQQAALPGLSKMAACAHASLDWQTRHDATIREMNIQYPADGWCVSAECATRIAIQKDQPFRMTGKDLIVTRIYGPDATDASRECVLKQKWRDRVWQHTDVRSHIIGGERRDISVQLASTLAAKAFPDRYVCVELHLWDDGAGETRRVGCYHTPPFALGINVRRRQQQQQQQHHTGDEKSADAAVVDASVCAKDVRPALSAENRTRRRSRQASVGADEPPPALSETGLDDVDADAAPAPALKRPKLEHVSMPGLAPHYLGLEAFAQAVLGDFTALRGIYAPASLAASASLLQASPAHAALQRGCGMADAFAMRMASHGYPLYAGAGTHGFLDLHALSSLDSLGLFAPSTFVRDDGLGGCATFTSHVMADAAGAAGAGCVTPDSPAYTHSETDTGSEALMSEVESDPVLSCLDWKGLM* # ORIGINAL: g11209.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 51321 57674 . + . ID=g11209;Name=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 51321 57674 . + . ID=g11209.t1;Parent=g11209;Name=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 51321 56549 . + . ID=g11209.t1.exon1;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 51321 56549 . + 0 ID=cds.g11209.t1;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 56701 56829 . + . ID=g11209.t1.exon2;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 56701 56829 . + 0 ID=cds.g11209.t1;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 56975 57062 . + . ID=g11209.t1.exon3;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 56975 57062 . + 0 ID=cds.g11209.t1;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 57194 57355 . + . ID=g11209.t1.exon4;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 57194 57355 . + 2 ID=cds.g11209.t1;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 57478 57674 . + . ID=g11209.t1.exon5;Parent=g11209.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 57478 57674 . + 2 ID=cds.g11209.t1;Parent=g11209.t1 #PROT g11209.t1 g11209 MATPSGPTTGSSSSSSGNASDRLTSFNPLSPEARKAEGNASRGSFFSRLFKPTVDPSDGGSQLRQDNVDSFRGRTYATSPVTVPRRLSPASSDDWSVASTPPLLETDGPSAGFAPSSLPDRHVTDIPTASAGSRGNITPPAMRALFAASRSTSAPDLTRLRAAGVGGDKEQPKSTDANMGSGVFGEGLGDNASRGREESSVGGVRTAVAADAGAIGAPGGSAGGHGAGPSNHLDGIRSMTVVLKRLRNIADPQQEDQFLKHYWMPDQNCKECYDCGAPFHTFRRRHHCRICGQIFCWKCCSQAISGDMFGHKGDLRVCNYCHNVIERYKEDEGRAEESLASKRSTPSMSPSPSAKFLARSSSGPALKFAHKNTTGGAAQGTPAAGTGQAQHHAAPEATVRFAEDWPIHRGLSSPHHAAPDDGSESDEEAGPPLPHAPDATSMLDDDDAGGPAWLRQVSHGWSGAAAGEAGEATVSQGESRASADDDSTTPAADRWAAAMGSGASMVPHAEGSGVFASGTPAITMPASPDRVGELPSSTGAGPPVVGSVAESLRSGGSLSIGSDGHDRRYSFNSFKRPRQEFLPKDRYESYIKNALRGEDGVSAEVAEAMGRPFSLSASSVVSTGLSPMMDAVAPVATTEHKDRKPSLERVERERLALQRLIVEGARHVGSLVRQLLRAECLDAEWEGLLMPLVDCVTSEVRPDVRSGDKMDVREYVKVKRIAGGTMSESAHIRGVVITKNVAHKRMCREIHNPRILMLRFAVEYQRADKQLSSLDPLVLQEKDHLKILVAKIASARPDIVLVEKTVSRLAQEYMLEAGIVLALNVKASVMERISRCTGADILTSIDKLNFEPKLGTCASFRLVSYKDDVELLQQQLEDDRPAKPRTLMHFDGCPPHLGCTISVRGATRSELARVKRVVRFAVYVAHSLRLETRLLIDEFATLPDALPDPFALATISECDGHEDAHPVVAPVPGVADEWLRDYVVPVADDFGAAILSGSPSVRFPLPFLYTVDGQQCSTRSLLPAQAYWTRRTADGVSGDASPDASQLPQCGGPSLARESAVADELVPARANAVVDCLSPHNHQSITVLFSSLCPGAANPCIAPQVVRLKYFMDNDMTLGQYLERFCFSSSYRCPNAECDQPMVNHVRSYTHDCARINIALETFQPQVEVTSVILMWSWCKICQEMTPVVPMSDDTWAISFAKYLELSFYGAEYVSRAGTCSHSLHRDHVRYFGCQNLAVQLEYDTIDLLEIAIPPSIIEIASMWSPDWDAEIRSLEATVDRVFEAVRERVAAGPDIELIDHRAEACRDQLREVGAQAERERLQAVDALRQARVLAAEACGGGATSPAASAQLTEHVALLKRSLCLIIAGKNTALADIWHSYAPEKGRRTASSKSTQSSSSSASPAPVSPSPRLLRPLETDGSADSFPPLAGEALLAPALTTTQDDVTDAPEATDLDSVSVLAADATLAAGVGSRSSVYLSLPSAAAQASKPNEKRGAIMKFLTGSSASGYQPIVPPFAVDEHYMLPPGLRTMRVVYEDEPSSIVAYTLCSREYFDQIRLIQSGHRHGAALDVNASSDGEADAVSLQQQQQAALDAIAEEGDDEVAPHTRGSMGSMGQPANTHTHPSHAALPTLPTRSGVPTSGNVHIKHQFSDAAGKFYCKVYFAEQFRCLRQRYVQGGESAYVQSLARCISWAAHGGKSGSTFCKTRDDRYIVKQMSRLEAQSFMEFAEHYFDYMWKDYNGQRPTVMAKILGVYRIGFKNAQTGRSLKQDVLVMENLFYMRRISRIFDLKGSIRSRYVHSTGKDDVLMDENLLEFICESPIFIRPHTKTVLKRSIWNDTSFLSRLNVMDYSLLVGIDEQRRELVIGIIDYIRTFTWDKKLEMWVKSTGLLGGHGKMPTVVSPEVYKSRFREAMDRYFLMVPDKWTGLGLDSLC* # PASA_UPDATE: g11197.t1, single gene model update, valid-1, status:[pasa:asmbl_5560,status:12],[pasa:asmbl_5561,status:12], valid-1 NODE_30_length_59095_cov_42.1109 . gene 159 2882 . - . ID=g11197;Name=g11197.t1 NODE_30_length_59095_cov_42.1109 . mRNA 159 2882 . - . ID=g11197.t1;Parent=g11197;Name=g11197.t1 NODE_30_length_59095_cov_42.1109 . five_prime_UTR 2763 2882 . - . ID=g11197.t1.utr5p1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 2593 2882 . - . ID=g11197.t1.exon1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 2593 2762 . - 0 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 2241 2397 . - . ID=g11197.t1.exon2;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 2241 2397 . - 1 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 2017 2034 . - . ID=g11197.t1.exon3;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 2017 2034 . - 0 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 1712 1829 . - . ID=g11197.t1.exon4;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 1712 1829 . - 0 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 1164 1269 . - . ID=g11197.t1.exon5;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 1164 1269 . - 2 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 883 1042 . - . ID=g11197.t1.exon6;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 883 1042 . - 1 ID=cds.g11197.t1;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . exon 159 701 . - . ID=g11197.t1.exon7;Parent=g11197.t1 NODE_30_length_59095_cov_42.1109 . CDS 159 701 . - 0 ID=cds.g11197.t1;Parent=g11197.t1 #PROT g11197.t1 g11197 MARPMAPGNSLYAARRASIMPRTDSSGNISGQGEGSRKNRRYATSDVFESNIDDHDWDFGGKSYGEQGKQAMAGERLILQAWSKDVRSLIASKVKASRMRDKAELKDLEDLCKNMERERENLQLEIESIASVINRDARGTLKKELNADLTAKELSIFSSGEIDRNVELCDRLYFFHKIREKERTSLFREGNMLVSRMGDLIAENSRNNIRRYLERGWSTLHENGVAGGRIRAQDAALNRFHRKLTLDPFDVIAPLCLSEDNLEMDFRIPATQGPAESSAWRVVRATDGPWVVRENSKPLMLEMLTVARRTMETVTSGFVAGKLLARIVDAVHPSSSSPLHPRVMSQPTGFMETIERQLRSLGYHVTPSLAETGDRLESRTTCLDVIGQLEGSLLRTMRYYFEIDAQENKGLSSLPRATWAVGE* # ORIGINAL: g11205.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 24729 37285 . - . ID=g11205;Name=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 24729 37285 . - . ID=g11205.t1;Parent=g11205;Name=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 36702 37285 . - . ID=g11205.t1.exon1;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 36702 37285 . - 0 ID=cds.g11205.t1;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 36487 36601 . - . ID=g11205.t1.exon2;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 36487 36601 . - 1 ID=cds.g11205.t1;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 35326 36387 . - . ID=g11205.t1.exon3;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 35326 36387 . - 0 ID=cds.g11205.t1;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 24729 35216 . - . ID=g11205.t1.exon4;Parent=g11205.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 24729 35216 . - 0 ID=cds.g11205.t1;Parent=g11205.t1 #PROT g11205.t1 g11205 MDVQVTARGAQSSRAANGATNSAGAPTLPLLPTLPTQHQRRGRPSWRESTGAAGSLRPDLVAGGADGENGGVPGTGDHDVLASLPRGHRGTSTGAALVQSLLSGRGLPPATVSAGEFDGKPSPRRPLGNGALGGSGGAGVTLGQSMSGAPVTGLGATNGNTSTAGAAGARRTGAPGAQSKRDKEGFRTALVNIIMQQEIANGRADATQRTGSPPPLPPLKQERPLSPNEKDLLRYYYYVNNGIDTEHVAPMEETWLDDVLNLVSPALKQGHEACIERLSDEMREDYLLSVKKAIVDFVLRDPREKRTEPTDGVSSGDDELRMVPKPWHRSFETARDFISENLFLTNPTMLALLDLWHKYGSLRVISSAEITDPSADAFELTAFQSLIVRHCDACKEELVKGWFPEAVRIFYVGNKKKQITYARLDSFFDGVGVVMTNQLRALALASIDAYIGIFCDKTPAELPAFAIRLVLDGTNVRFEPSLSEFEQVVADVFDAILRAVSVVPRVETKLFVGDTDARGRGNLSPWVEPSVVVAAKERVRNVIRSQMRTPQEYLSVYDKYSHLITRQAEKSVQEFMQGKHSFEEYTAEVVKYRNMANDVNYNTRRKVPLGLVELHCEELNQSLSKRAEKMCTQLLDRIAKDNQDINRRICEQYEAIAEKALTTPGNTEEMISLQKYMEEVERKTMHSLEGEIANAKKRLEFLINYTSLTPDMLKLNNVTFTWPQRMEPIFEEHQAIMMQTRATAEENLRARREKFVEELDAYGKQLVEFRDWGDLREVARYLKRAAYLQSRLEGAQDKITAFNAEEEAFGWERTAYPVREQLMVQLEPYLSLFQTVVDWSRLHKVWMEGPFLSLDADTIDAEAGNMWRQLYKSEKAFADVPALRRLAETIKEQVDDFKLHMPLVQALCNPGLRDRHWEKMSDAVGFELKPDEESTLSKMLEMNLEQYLEQFETISESASKEFALEKAMDKMLHEWDKMEFNMIAYRDSGTHILTAIDDIQSLLDDQIVKTQTMRGSPFIRPFESQIKDWEQRLLMMQEIIDEQLKVQATWLYLEPVFSSPDIMAQMPEEGRRFNQVDKTWREIMKIAVSDKRVLAVTSIDKMLERMKKSNELLELIQKGLNDYLEKKRLYFPRFFFLSNDELLEILSETKDPMRVQPHLKKCFEGISSLEFTDAMDITHMKSSQGEVVPLTVPISTAKARGQVEKWLGELERAMIASVHRVISESLESYATTDRTKWVTGWAGQVVLCVSQIYWTRDVHTAIRGGKKALVAYRDTCTRQIEGIVEMVRGQLPRLNRYTLGALVVIDVHARDVLAKMADEGVSDENDFEWLSQLRYYWEENQCVTRMINSTLPYGYEYLGNTPRLVITPLTDRCYRTLFGALHLNLGGAPEGPAGTGKTETVKDLSKAVAKQCVVFNCSDGLDYIAMGKFFKGLASCGAWSCFDEFNRIDLEVLSVIAQQIMTIQRAIASKLERFNFEGTDIKLNPTCSVFITMNPGYAGRSELPDNLKALFRSVAMMVPDYAMIAEISLYSVGFVLARPLARKIVATYRLCSEQLSSQHHYDYGMRAVKSVLTAAGNLKLKYPDQDENILMLRSINDVNMPKFLAHDLPLFRGITSDLFPGITLPTPDYADLLVSLDTSCTKLNLQNVPAFQDKILQVYEMMLVRHGFMLVGEPFGGKTSAYRVLAQALVDLAERNVAGYDKVEFLVINPKSITLGQLYGQFDPVSHEWTDGVLANSFRAFASSTTPDRKWLIFDGPVDAIWIENMNTVLDDNKKLCLMSGEIIQMPDNMNLVFEPMDLEAASPATVSRCGMIYMEPANLGWRPMLESWILTLPPVLTPGFKASLRALFERMVDPTLRFVRKCCRELVPTSDINLVRSLMNLLECLIEDLRDEQTSRDLQDDTIEAWVEGAFLFAYVWSMGASTDDDGRRRFDELARQLITGAVTVDLTAKYGATIEVPSGMPPLRMAMPLDAGTVYDFVFVKERPLGRWIKWMDRIDETQTIPAGASFNTIIVPTIDTVRYAYLLDILVSRQKPIAVVGPTGTGKSAYITDKLLNGIDRNVYNPVIINFSAQTSANQTQDIIMSKLDKRRKGVFGPPLGKRTIIFVDDVNMPAKERYGAQPPIELLRQWLDHRNWYDRKDTSKQKLEDVQIVCAMGPPGGGRNQLTPRFLRHFNLLAINAFDDTTMTRIFSKIMTWHITTNEFGPGFAEVGKQLVSATIEVYKAAMENLLPTPAKSHYTFNLRDFSRVVQGVLLCKPVSLTSPDAMVRLWTHEIFRVFYDRLVDDSDRAWLYNYTIAVTKTKFGLDFHQLFSHLDVNGDGVVDENELHSLLFCDFLVPGATPRLYEEVRDMEKLNQVVESYLEEYNNLSKKAMGLILFRFAIEHVSRVSRVLQQPRGHALLVGVGGSGRQSLTRLATYMAGFELLQVEISKSYTATEWREDLKGMLRKAGEKGMPCVFMFSDTQSKDESFFEDINNILNSGEVPNLFAADEKQEIIEKMRPIARHLTDASPLALYNVFIGRVRDNLHIVLAMSPIGNAFRERLRKFPSLVNGCTIDWFTSWPDDALEVVAERFLEDVELDADVRRACVVMCKNFHQGTRRLSEKYRQLLSRYNYVTPTSYLELISTFKQLLGKKREIIVRNKRRYEVGLEKLDFAASQVASMQRELEDLRPQLIKTSEDTEAIMKVIERESVEVEVTEKIVRADEAVANEKAQQAQSIKSECEADLAEAIPILEDALAALDTLTPSDINTVKSYKSPPSGVKLVMEAICVLKDVKPDRIPDPSGSGKKIEDFWGPSKRLLGDINFLKSIKSFDKDNIAVKTMKIIRDRYIPNPEFVPEKISNASKAAEGLCKWCRAMEGYDRVAKVVAPKKEALKQAEGDYAECMTALEEKRRKLKEVQDKLARLRREFQDMTAKKEDLERQVDLCTKKLDRAEKLIGGLGGERDRWATSAEDLGHTYTNLTGDVLIASGVVAYLGAFTTTFRQEQTEEWSRLSRSLGIPCSETFMMGKTLGDPVSIRAWNISGLPTDSFSVDNGIIVSNARRWPLMIDPQGQANKWIKNLERNNQLHVIKLTDSDYVRTLENCIQFGNPVLLENINEELDPLLEPLLLKQTFKQGGSLCIRLGDSTIEYSKDFRFYITTKLRNPHYMPELAVKVTLLNFMITPEGLEDQLLGIVVAKERPELEEEKNALIVQSAENKKQLKEIEDKILEVLSASQGNILEDETAIQVLSSSKVLANDINQKQMIAEETERKIDETRNGYKPIAFHSSVLFFTIADLANIEPMYQYSLSWFINLFIGSIESSEKSDAVEERLKNLRAHFTYSLYCNVCRSLFEKDKLLFSFLLCANLLRAAGDLDADEFRFFLTGGIALDNANKNPTDWLPEKAWNEFCRLSDVGAFRGLREAFQIDPDLWKEIYDSPTPQNQELPTPWEENLTDFQKMLVVRCMRPDKVVPAVQEFVSANLGAQYIEPPPFDLAGSYADSHACAPLIFVLSPGADPMNALLKFAEDRGFSGPRCQSLSLGQGQGPIAREMIDRAVKEGTWVVLQNCHLAVSWMSTLEKLCEDLVPDKVHPEFRLWLTSYPSPHFPVSVLQNGVKMTNEPPKGLKANLLRSYLSDPISDPAFFAGCRNEAAWEKLLFSLCFFHANVQERRKFGPLGWNIPYEFNESDLRISMRQLQMFINEYDEVPFTALAYLTGECNYGGRVTDDWDRRTLLTILSKFYRPDVLLQDEYKFSASGTYFAPPKSNYDRYLEYIKALPINQLPEVFGMHMNADITKDQQDTQRLFDCIMMTQARSASSGGRSNDETIEDVAGDILNRLPPNFDIEAVMEKYPTSYKESMNTVLVQEMVRFNRLLVTVRASLVNIQKAIRGLVVMSSDLEEVTSSILRGRIPQMWMGKSYPSLKPLGSYVNDFLERLRFLHEWSLNGPPPVFWISGFFFTQSFLTGALQNYARKHTIPIDELGFEFDVMTDALPDKPPKDGVYVRGLFVEGARWDRNTKCLGESTAKVLYDQMPTIWLRPGEKEKFHIASSYECPVYKTSERRGTLSTTGHSTNYVIAMRLPSDQPESHWIERGVALLCQLDD* # PASA_UPDATE: g11207.t1, single gene model update, valid-1, status:[pasa:asmbl_5559,status:3], valid-1 NODE_30_length_59095_cov_42.1109 . gene 44637 46811 . + . ID=g11207;Name=g11207.t1 NODE_30_length_59095_cov_42.1109 . mRNA 44637 46811 . + . ID=g11207.t1;Parent=g11207;Name=g11207.t1 NODE_30_length_59095_cov_42.1109 . five_prime_UTR 44637 44786 . + . ID=g11207.t1.utr5p1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . exon 44637 45036 . + . ID=g11207.t1.exon1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . CDS 44787 45036 . + 0 ID=cds.g11207.t1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . exon 45130 45268 . + . ID=g11207.t1.exon2;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . CDS 45130 45268 . + 2 ID=cds.g11207.t1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . exon 45390 45404 . + . ID=g11207.t1.exon3;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . CDS 45390 45404 . + 1 ID=cds.g11207.t1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . exon 45520 45667 . + . ID=g11207.t1.exon4;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . CDS 45520 45667 . + 1 ID=cds.g11207.t1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . exon 45832 46811 . + . ID=g11207.t1.exon5;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . CDS 45832 46692 . + 0 ID=cds.g11207.t1;Parent=g11207.t1 NODE_30_length_59095_cov_42.1109 . three_prime_UTR 46693 46811 . + . ID=g11207.t1.utr3p1;Parent=g11207.t1 #PROT g11207.t1 g11207 MKVEGYSLGRTVGKGSEAVCKLAKDKHTHEKVVIKQIKEGEDALCDNSTEECGSPNEIHIHSLLASGKTQHAHIVNVKKVIHEGNKWYEVLEFCSQGDVAHKLNGTPTTEMQAQKWFKDLIEAVKYMHDRGICHRDIKMENCLIDACGSLKVADFGVGAVFRNEDGTVKMFSDVLGTMPYMAPEVYHGEAHDATRADIWSCGVTLLAMLAGDVMWEAPDDTDDVYAAHLRGELLGTFSFGDDLKELLAAMLSVDPARRPTANELYEAKWMKTRSPIGIHSCMCPWTSKPRHSAPAKAQAPVHMERSNSGKRFFVHLGGLGDLLRKISIKHRGKGKNRGGEAAATCAHRDVAPCCDHAGCCAPGSSEHISEACESEEGPTSPPSSPVHSRAPMSIFVDDASGSKPCAPPSPRASDEEHLHVVRDDEGRCTSCSSLPPVLKIVEGTVRPCDNALHSPPNTPVDTAAPKSLYM* # PASA_UPDATE: g11202.t1, single gene model update, valid-1, status:[pasa:asmbl_5557,status:12], valid-1 NODE_30_length_59095_cov_42.1109 . gene 13432 18738 . + . ID=g11202;Name=g11202.t1 NODE_30_length_59095_cov_42.1109 . mRNA 13432 18738 . + . ID=g11202.t1;Parent=g11202;Name=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 13432 13505 . + . ID=g11202.t1.exon1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 13432 13505 . + 0 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 13646 13756 . + . ID=g11202.t1.exon2;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 13646 13756 . + 1 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 13873 14076 . + . ID=g11202.t1.exon3;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 13873 14076 . + 1 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 14353 14500 . + . ID=g11202.t1.exon4;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 14353 14500 . + 1 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 14739 14915 . + . ID=g11202.t1.exon5;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 14739 14915 . + 0 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 15069 17473 . + . ID=g11202.t1.exon6;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 15069 17473 . + 0 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . exon 17719 18738 . + . ID=g11202.t1.exon7;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . CDS 17719 18523 . + 1 ID=cds.g11202.t1;Parent=g11202.t1 NODE_30_length_59095_cov_42.1109 . three_prime_UTR 18524 18738 . + . ID=g11202.t1.utr3p1;Parent=g11202.t1 #PROT g11202.t1 g11202 MPQTEMITLNGKLTDTLDFGPAFRKYIAEEYEQDPSLYVSDLAKLNTLRTEARNAPPHETGRATLLRYLAELSSVETRFPCNEGGIRLSFTWYDSFTGKSVSQHSIAYEKACVLFNIFAILSQMAGSIERGSEGDGVKRACNLFEAAAGTLQHLNDAFMHAPTVDMSRDSLAILIELMTAQAQECYWEKGVREKMSLLSIARLSASVAALYEKVHELVTTATASISKSSMASWAPTAKAKSLHFRSVMHFHVSLAKKEESKFGEQVAHHRRSFALAQDALRASKGLFPGLVDAISRNQSLVARLLPFAEKDNDTVYHERVPSLESLADPEAMQMAKPTAFCGAPQPSLFARLLPITAIVEISKYDDSVASVVRRAVEVQEQADAEMERAFNAMELPQSLDKAASVADDVLSEDLIRCIAADAESGGASAFVAAVAAITSASSDVAGQFAAVEAKVVSLTAESVGAVTGATDAEADEFVQKLADYRAHLATARATDAALAEDYERVRVHCEAVSRGLEGVQAVLPKRDLLAEGSLEEERIVTELRGLVQQVEALRARRHVIVSEVRRTQAADNVGALIAFCFHDAPAVQRVFDEQLSKYAHFEAELKSNAAEQTKLIVAVASANASLVEQRGSSAEKSARNAMQAAMVASHSAFVALQASVGGGANFYRDIADALDELSAAVDSVRDERARVRREKEEAVRREKEEAVRRQEIEAREAEARLARLTLLSAGSSTLLVPAPSEADAGGQQGAAERFMQHFDLMRLERAAAAAEPHAAAAGGFIAEYQRVCVDDRAWQASPAGQAAVQSGLEFARAFPEKNRYRDICPYAHARVRLPGDGYINATSFAGLVRDGPSYIAAQGPLASTVGDFWWMVWHYKSPQVYMLTAEIEGMKIKCHRYWPADGEAAVHDTLGVASMGPAVPAVGGSELRVFRLTNLETGETRDLQHFTYAAWPDHGVPASLEPIASLVAESLASALAHRDGTAIVHCSAGVGRTGSFIAMALAVDALRRGVRVAIPDIVSAMRRCRPSMVQTPLQYEIVHRVTAITAETLCGRQRLPSANARMPPVPLHRPPPPPRPTENDDAAMPSLPMPSLCMPSQRPVGAGDMPLQNGAYYAPQPQPQQLQYNPSTGLYQLQGQSLPGMYGSPDSQQAQYGGQYAAPEHPHAHQAQYQQPQGQAQYQAQYAPPYSQPHQMQQPQQPQQQQYAQAPYVQQQQAAGYGQPQYGQAQYGQPQYGQAPPYAQPPYGPPPHGNAQYGQQQQQQQYPQQPAPMYAGGVVGGTPIKGPIILDTPVPTGSVLNPQTAPTNLLD* # PASA_UPDATE: g11210.t1, single gene model update, valid-1, status:[pasa:asmbl_5563,status:12], valid-1 NODE_30_length_59095_cov_42.1109 . gene 57848 59081 . - . ID=g11210;Name=g11210.t1 NODE_30_length_59095_cov_42.1109 . mRNA 57848 59081 . - . ID=g11210.t1;Parent=g11210;Name=g11210.t1 NODE_30_length_59095_cov_42.1109 . five_prime_UTR 59079 59081 . - . ID=g11210.t1.utr5p1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . exon 58892 59081 . - . ID=g11210.t1.exon1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . CDS 58892 59078 . - 0 ID=cds.g11210.t1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . exon 58648 58763 . - . ID=g11210.t1.exon2;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . CDS 58648 58763 . - 2 ID=cds.g11210.t1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . exon 58319 58399 . - . ID=g11210.t1.exon3;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . CDS 58319 58399 . - 0 ID=cds.g11210.t1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . exon 58050 58187 . - . ID=g11210.t1.exon4;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . CDS 58050 58187 . - 0 ID=cds.g11210.t1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . exon 57848 57959 . - . ID=g11210.t1.exon5;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . CDS 57882 57959 . - 0 ID=cds.g11210.t1;Parent=g11210.t1 NODE_30_length_59095_cov_42.1109 . three_prime_UTR 57848 57881 . - . ID=g11210.t1.utr3p1;Parent=g11210.t1 #PROT g11210.t1 g11210 MEYMDGGSLTEIVGPGRMTEPQIAFVCKELLGALGYLHSRNRIHRDIKSDNILLGLDGGVKLADFGFCAELTDHRGKRNSVVGTPYWMAPEVIRSKDYGCKVDIWSLGIACMEMAEGEPPYLNFPPLRALFLIATHGTPSLKNPEQWSDAFRDFMAATTEVDATLRPSADELLKHPFLRCACPQPRLGALVKKIKDNSG* # PASA_UPDATE: g11199.t1, single gene model update, valid-1, status:[pasa:asmbl_5562,status:12], valid-1 NODE_30_length_59095_cov_42.1109 . gene 6684 9280 . - . ID=g11199;Name=g11199.t1 NODE_30_length_59095_cov_42.1109 . mRNA 6684 9280 . - . ID=g11199.t1;Parent=g11199;Name=g11199.t1 NODE_30_length_59095_cov_42.1109 . exon 9132 9280 . - . ID=g11199.t1.exon1;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . CDS 9132 9280 . - 0 ID=cds.g11199.t1;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . exon 7760 8951 . - . ID=g11199.t1.exon2;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . CDS 7760 8951 . - 1 ID=cds.g11199.t1;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . exon 6684 7494 . - . ID=g11199.t1.exon3;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . CDS 6790 7494 . - 0 ID=cds.g11199.t1;Parent=g11199.t1 NODE_30_length_59095_cov_42.1109 . three_prime_UTR 6684 6789 . - . ID=g11199.t1.utr3p1;Parent=g11199.t1 #PROT g11199.t1 g11199 MLTAITNEWVYLSRCIAQNIVWGSNTPFLSSDACRAHDFESEPSVKELFAGALNDAAYYGMKLNGTNYGLTGICVGKLRAFVTIISNRLIQLKPSTDIASIATSKKAIMAFCVDPGFLVAPMCNAVKAMFDSIDRVILFLQDTYVKPLFEQMKMALLATYAGPYAQDFLELWDEFEDSNDNDKPTFKINMAYLPEDLRIQPTYSYSVLAAIAGVSYESFMNAAKGAQSTDAIATNTYSLAKTRLNATVKGDDKCMQSVWKGLVNGIEGAKNGDDLTKVDTDSKYNWLDCYTATNEDGSVYQSRLARFVSLLRALRALHTLVGPTINVLRRFASLETGEDQLKRTLNLTGLHYTANPIQLTKLGLMDRSGIDAMVSRAGSDPAFPSTSYSQICRDYPHIICDAQQSLDDPNTVLGPVYGQSTTDAERSVTLWFHRSWDAVTFQKTYSQSKCQCSFTDFVLGNSPARVLNIYNQIFMYPPDCQACFDYAPAGQLARPSAPAPPESSVQQPPASSSAAPPQQSSSVPALPASSAQPQPASSSVAQQQPTSSSVAQQQPASSSVVDQQPSSPINAASSPVPPASSAAPVATSQGPAQPPIVPPGPVDSSSGAQVASKSSSNSGAIAGAVVGSLVGVGAAVAGAFYYMKTRPGSNPFSKFGETKQVDDMRDLKMADNPLHGQSLDV* # ORIGINAL: g11200.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 9894 10764 . + . ID=g11200;Name=g11200.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 9894 10764 . + . ID=g11200.t1;Parent=g11200;Name=g11200.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 9894 10028 . + . ID=g11200.t1.exon1;Parent=g11200.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 9894 10028 . + 0 ID=cds.g11200.t1;Parent=g11200.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 10252 10764 . + . ID=g11200.t1.exon2;Parent=g11200.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 10252 10764 . + 0 ID=cds.g11200.t1;Parent=g11200.t1 #PROT g11200.t1 g11200 MPPVPACGRNAAVLITRLLFLRIVRSYGHYVEGTGSVLQPHGTREHDALMRVPLQEHEELWQTHAAQQADNDKGSADASPPMRTRTRDDVNEDPEGGDGLGDDSECQSPAKKARRDADTDADAPVADAKQKTAAKPSPPSAQAQHAPEECPLSNISLRYFTPREVANIQGFPRDYEFPAGFTARQCYRVLGNSLNVVVVSRLIKHLLTEGESGQS* # ORIGINAL: g11208.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 46889 49608 . - . ID=g11208;Name=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 46889 49608 . - . ID=g11208.t1;Parent=g11208;Name=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 48766 49608 . - . ID=g11208.t1.exon1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 48766 49608 . - 0 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 48544 48673 . - . ID=g11208.t1.exon2;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 48544 48673 . - 0 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 48227 48422 . - . ID=g11208.t1.exon3;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 48227 48422 . - 2 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 47912 48129 . - . ID=g11208.t1.exon4;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 47912 48129 . - 1 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 47596 47777 . - . ID=g11208.t1.exon5;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 47596 47777 . - 2 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 47398 47463 . - . ID=g11208.t1.exon6;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 47398 47463 . - 0 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 47166 47312 . - . ID=g11208.t1.exon7;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 47166 47312 . - 0 ID=cds.g11208.t1;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 46889 47050 . - . ID=g11208.t1.exon8;Parent=g11208.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 46889 47050 . - 0 ID=cds.g11208.t1;Parent=g11208.t1 #PROT g11208.t1 g11208 MEKEDQLRLLKAASGIEDETFLISVLDAHKWDVEQSLNLLLGDGGATNRPASNVSARTEGNAGLFVAGTAVPRRTFEGNWVDLTADDTQGMADTNDFGQRDGRLSPAPLVDLSGANDAANMNLTVKWIQDDLHIPITDTTTVHDLKRTLEALTGVPASSQELVGWPVDREPLNATRISSIPFTAAARELILLGEPRRPAALNNGAQLTESDDDDMELAVEDDSLFDVITVTVLWHGDALSFALPADNTVSDLKNHVQLACGMPVLRQRLHHLPSNELVDGQRTLASVAARYGDRQIRLSLSTTPADTEGFDSDSERDIEMEEPLVDPGVDDESLACAQFAAHFGPTYGEPHPEFYVGPLADALKTSRLTCKPVLIYVHQSHARGAHDFCRNVLCNPIIADYLRENFIVWGWDVTSNRRQLMRLVDILNALFDDYPFVGGTEFPSLAVITRIAGAYAVDSMRFGVQELEDLYAWLMGSHESASVHLAAGMTADREIEEERATRERIRIEQDEAYQASLAADQQRAAEKEAIARQEQAVVASREQKERDRLASIDALSRLSPVEPSAEEPGTFEILVRLPNGMRLRRRFLPTHTMQELRGFIAMQGLLPGEYRLFKMHPRTDLGDCAAAATLPSAGIAPRDTLVIESAQ* # ORIGINAL: g11204.t1 original gene structure, not modified by PASA NODE_30_length_59095_cov_42.1109 AUGUSTUS gene 22222 24381 . + . ID=g11204;Name=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS mRNA 22222 24381 . + . ID=g11204.t1;Parent=g11204;Name=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 22222 22309 . + . ID=g11204.t1.exon1;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 22222 22309 . + 0 ID=cds.g11204.t1;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 22753 23031 . + . ID=g11204.t1.exon2;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 22753 23031 . + 2 ID=cds.g11204.t1;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 23319 23557 . + . ID=g11204.t1.exon3;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 23319 23557 . + 2 ID=cds.g11204.t1;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 23864 23977 . + . ID=g11204.t1.exon4;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 23864 23977 . + 0 ID=cds.g11204.t1;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS exon 24265 24381 . + . ID=g11204.t1.exon5;Parent=g11204.t1 NODE_30_length_59095_cov_42.1109 AUGUSTUS CDS 24265 24381 . + 0 ID=cds.g11204.t1;Parent=g11204.t1 #PROT g11204.t1 g11204 MAAQLLERLGKLGLGLAILGGVGQSAIYNVDGGHRAVIFHRFSGVQENVVPEGTHFMIPWLHKPFVFDVRTQPRNINTVTGSKDLQNVNITLRILYRPRVNALPTIFKRLGSDYDERVLPSIGNEVLKAIVAQFDAGELITQRDLVSQRIRDALLKRADEFNILLDDISITHLAFGREFTQAVEMKQVAQQDAERARFVVEKAEQEKLAAIIRAEGDSKAAQLISAALQASGSGLVEIRKIEAAKEIAGTLARSRNVVYLPNSNGNILLNINPNAQNA* # PASA_UPDATE: g3403.t1, single gene model update, valid-1, status:[pasa:asmbl_597,status:3], valid-1 NODE_1159_length_13471_cov_41.5695 . gene 4141 7551 . - . ID=g3403;Name=g3403.t1 NODE_1159_length_13471_cov_41.5695 . mRNA 4141 7551 . - . ID=g3403.t1;Parent=g3403;Name=g3403.t1 NODE_1159_length_13471_cov_41.5695 . five_prime_UTR 7501 7551 . - . ID=g3403.t1.utr5p1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 7390 7551 . - . ID=g3403.t1.exon1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 7390 7500 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 6925 7125 . - . ID=g3403.t1.exon2;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 6925 7125 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 6654 6764 . - . ID=g3403.t1.exon3;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 6654 6764 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 6200 6319 . - . ID=g3403.t1.exon4;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 6200 6319 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 5895 6055 . - . ID=g3403.t1.exon5;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 5895 6055 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 5275 5572 . - . ID=g3403.t1.exon6;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 5275 5572 . - 1 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 4856 4927 . - . ID=g3403.t1.exon7;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 4856 4927 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 4652 4729 . - . ID=g3403.t1.exon8;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 4652 4729 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . exon 4141 4511 . - . ID=g3403.t1.exon9;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . CDS 4473 4511 . - 0 ID=cds.g3403.t1;Parent=g3403.t1 NODE_1159_length_13471_cov_41.5695 . three_prime_UTR 4141 4472 . - . ID=g3403.t1.utr3p1;Parent=g3403.t1 #PROT g3403.t1 g3403 MAAVARAVASLGRVGSGTCSPAWIIASRAYSTKTDIDASSLAIVKTTAPKQKLPNSELVFGRTFSDHMLEIEFEEKSGWSAPTISPYHKLSLDPACTVLHYGVECFEGMKAYIDKDNNIRLFRPDMNMNRISISAERLALPPFDRKQFLECIKELVRLEKSWIPNQKGFSLYIRPTLIGTQESLGVGPSARALLYVICSPVGPYYKSGFAPVKLLADAKFVRAWPGGTGSNKVGGNYAPTIKPQQAAAAKGYQQILWLFGPDHELTEVGTMNVFVHWKNEAGDLELATPPLDGTILPGVTRDSVLALARKWGEFKVSERRITMSDVIKAVKEGRMIEMFGAGTACIVSPVEGIHYEGQDLAIPLALGKAGKLTQRVNDTILGIQYGEIPSEWSVVI* # PASA_UPDATE: g3404.t1, single gene model update, valid-1, status:[pasa:asmbl_599,status:12], valid-1 NODE_1159_length_13471_cov_41.5695 . gene 7835 13392 . + . ID=g3404;Name=g3404.t1 NODE_1159_length_13471_cov_41.5695 . mRNA 7835 13392 . + . ID=g3404.t1;Parent=g3404;Name=g3404.t1 NODE_1159_length_13471_cov_41.5695 . five_prime_UTR 7835 7902 . + . ID=g3404.t1.utr5p1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 7835 8195 . + . ID=g3404.t1.exon1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 7903 8195 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 8346 8460 . + . ID=g3404.t1.exon2;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 8346 8460 . + 1 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 8578 8721 . + . ID=g3404.t1.exon3;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 8578 8721 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 8905 9068 . + . ID=g3404.t1.exon4;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 8905 9068 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 9434 9558 . + . ID=g3404.t1.exon5;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 9434 9558 . + 1 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 9793 10001 . + . ID=g3404.t1.exon6;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 9793 10001 . + 2 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 10279 10467 . + . ID=g3404.t1.exon7;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 10279 10467 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 10768 10853 . + . ID=g3404.t1.exon8;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 10768 10853 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 11235 11406 . + . ID=g3404.t1.exon9;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 11235 11406 . + 1 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 11933 12091 . + . ID=g3404.t1.exon10;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 11933 12091 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 12256 12378 . + . ID=g3404.t1.exon11;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 12256 12378 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 12666 12710 . + . ID=g3404.t1.exon12;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 12666 12710 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . exon 13063 13392 . + . ID=g3404.t1.exon13;Parent=g3404.t1 NODE_1159_length_13471_cov_41.5695 . CDS 13063 13392 . + 0 ID=cds.g3404.t1;Parent=g3404.t1 #PROT g3404.t1 g3404 MVSALSVGRTHSTRVSDVEAGAGGASGAGGTSSAQSLLAGRPVIPSLADVQALTSLPQIEAVLQLLNEREREVDQSLDDLLGSRERLEQRMELLRDLVPKIHLLRNDSKQLNATISFTCRLAENVSSKVRELDVAQSNVKAATKVVDDIADLKSCIEGVRSAMRRADYETVAGHIHRFLSFDEKVLRGNAADFADDGDAATPDASPLEVLRKYQLDLESIVRDKFDEAIRAGDRGTVERFLKIFPLINLHQEAIKKFSKFLCGLIALSADKALSDAFHSSNTSRETVFVDLLTSLFDAVARTIDENQPVVETHFGPGSMLPVAQHVQRECDKQAKIILDRFKSERRLATQVHEAQAILSSRKVVPLAAPSAPGLSASGGSQDPAKTADLLLTEIGLLNSRTELYGRFIRRRVAADLAVLDAEAKASATSLSSTDENRATAAKNPTSHGTRPDGRLHFLPVEIGQFRRIFDDCELSKALQEIMGQYIVLEQSYMKLSIAKAVKLETHDVNSPTSSLVDDVFFVLKKATRRAVASSNIDCLCAMINHANSTLQSDLAPTLQERLRYGYQGDLKDILTSRLTSSAADASAGKNSYTVALNNAETAAEYTVKLMRAIESESGNAFSHIGEREKAKLQSCLNDLAATTELFRQLVETGMSGFCSSAVDPKVAPLVDAFVSIGYNIDETEFAARDASDPFVVPLVRVIDATLSQIKVRSVSRL* # PASA_UPDATE: g3402.t1, single gene model update, valid-1, status:[pasa:asmbl_596,status:12], valid-1 NODE_1159_length_13471_cov_41.5695 . gene 222 935 . - . ID=g3402;Name=g3402.t1 NODE_1159_length_13471_cov_41.5695 . mRNA 222 935 . - . ID=g3402.t1;Parent=g3402;Name=g3402.t1 NODE_1159_length_13471_cov_41.5695 . five_prime_UTR 797 935 . - . ID=g3402.t1.utr5p1;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . exon 714 935 . - . ID=g3402.t1.exon1;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . CDS 714 796 . - 0 ID=cds.g3402.t1;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . exon 499 612 . - . ID=g3402.t1.exon2;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . CDS 499 612 . - 1 ID=cds.g3402.t1;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . exon 222 390 . - . ID=g3402.t1.exon3;Parent=g3402.t1 NODE_1159_length_13471_cov_41.5695 . CDS 222 390 . - 1 ID=cds.g3402.t1;Parent=g3402.t1 #PROT g3402.t1 g3402 MNGLAVEPHPLFGGAMALSLPNSFVDVSAVREVPDNQEVLVHMETDQSVIVELVVFEEIADADAAGFHFDALAHDNEARQSVVHGVCQLAASDMPLISWVSPECMADVYVRIFVPVTFLRV* # ORIGINAL: g5576.t1 original gene structure, not modified by PASA NODE_1632_length_10104_cov_38.5267 AUGUSTUS gene 119 1307 . - . ID=g5576;Name=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS mRNA 119 1307 . - . ID=g5576.t1;Parent=g5576;Name=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 1013 1307 . - . ID=g5576.t1.exon1;Parent=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 1013 1307 . - 0 ID=cds.g5576.t1;Parent=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 645 826 . - . ID=g5576.t1.exon2;Parent=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 645 826 . - 2 ID=cds.g5576.t1;Parent=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 119 304 . - . ID=g5576.t1.exon3;Parent=g5576.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 119 304 . - 0 ID=cds.g5576.t1;Parent=g5576.t1 #PROT g5576.t1 g5576 MDATFRQRGRSRPRGGGRVPRGGGRPTDALSMQMQRQREREWRARNAATEEAVQTAPVVLGDVLPASLPETTVNEANQSRDVATTNTAVTSPSAPRPREISGFFYDSSKRKYFRVGSGNNRSNPLTRAIIRERSAASNRTAPAALAPTDVSGSSAVALASLGARAPTVKRLPITHALLSRELSNQRTAMTKRLCGDATVSARLGRWESRVGTVGVALTALE # PASA_UPDATE: g5577.t1, single gene model update, valid-1, status:[pasa:asmbl_2202,status:12],[pasa:asmbl_2203,status:12], valid-1 NODE_1632_length_10104_cov_38.5267 . gene 1692 4659 . - . ID=g5577;Name=g5577.t1 NODE_1632_length_10104_cov_38.5267 . mRNA 1692 4659 . - . ID=g5577.t1;Parent=g5577;Name=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 4543 4659 . - . ID=g5577.t1.exon1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 4543 4659 . - 0 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 4203 4350 . - . ID=g5577.t1.exon2;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 4203 4350 . - 0 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 4012 4080 . - . ID=g5577.t1.exon3;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 4012 4080 . - 2 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 3801 3890 . - . ID=g5577.t1.exon4;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 3801 3890 . - 2 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 3364 3682 . - . ID=g5577.t1.exon5;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 3364 3682 . - 2 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 2874 3023 . - . ID=g5577.t1.exon6;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 2874 3023 . - 1 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . exon 1692 2608 . - . ID=g5577.t1.exon7;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . CDS 2413 2608 . - 1 ID=cds.g5577.t1;Parent=g5577.t1 NODE_1632_length_10104_cov_38.5267 . three_prime_UTR 1692 2412 . - . ID=g5577.t1.utr3p1;Parent=g5577.t1 #PROT g5577.t1 g5577 MASVRLPAPECRIKIVRSSFLSPKSSHSKLLRSHPLNHAVDVFVTDIGSDRMKQLSAQLNTALGGKYHVLQAHPSSLITPQFIDLLRKGQFAAIERGAQLDRSNVVCVLPPGKLVLSLDKDTFEQFGLEGRKVLLSGVRRHVVEIDLLATAFVPGKKGYERVKWCLENRLSGAREFLVATDTDIESSGILPGDVSVQTVPLTTTTRDFEEVYVPVFNCLRDGSVAREADVAAVELFEWIGAVACGLTCAPVTADDFTSTFSVDSAVLAHNVVVSRGVSMRWAGIVLPGAVDRALSILREFVLTMPRDGVATLTAFGFADSPISFGDKKHGFDSNGDNLVCFALFPGGKYVSYAATNESDEHS* # ORIGINAL: g5578.t1 original gene structure, not modified by PASA NODE_1632_length_10104_cov_38.5267 AUGUSTUS gene 5076 10104 . + . ID=g5578;Name=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS mRNA 5076 10104 . + . ID=g5578.t1;Parent=g5578;Name=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 5076 5154 . + . ID=g5578.t1.exon1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 5076 5154 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 5357 5606 . + . ID=g5578.t1.exon2;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 5357 5606 . + 2 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 5801 5849 . + . ID=g5578.t1.exon3;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 5801 5849 . + 1 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 6031 6131 . + . ID=g5578.t1.exon4;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 6031 6131 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 6311 6504 . + . ID=g5578.t1.exon5;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 6311 6504 . + 1 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 6806 6894 . + . ID=g5578.t1.exon6;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 6806 6894 . + 2 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 7151 7306 . + . ID=g5578.t1.exon7;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 7151 7306 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 7633 7695 . + . ID=g5578.t1.exon8;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 7633 7695 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 7960 8166 . + . ID=g5578.t1.exon9;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 7960 8166 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 8348 8476 . + . ID=g5578.t1.exon10;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 8348 8476 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 8748 8855 . + . ID=g5578.t1.exon11;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 8748 8855 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 9047 9153 . + . ID=g5578.t1.exon12;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 9047 9153 . + 0 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 9455 9520 . + . ID=g5578.t1.exon13;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 9455 9520 . + 1 ID=cds.g5578.t1;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS exon 9915 10104 . + . ID=g5578.t1.exon14;Parent=g5578.t1 NODE_1632_length_10104_cov_38.5267 AUGUSTUS CDS 9915 10104 . + 1 ID=cds.g5578.t1;Parent=g5578.t1 #PROT g5578.t1 g5578 MAAIERELQLEFSSINAMLDKQTTSKCVELCELFCITPSELALKWDAYSMQYEASLNIASLERLKSALQQSQKQQLASASAKKATNKRQSIGLDSSAIEAGFHTKESMHEVLAMFDAPEQALKNVQPPKKKPATYASPEPPRRSTDYSPFSPNSLASPPSRATSSASSAYKNRQGAGKVETVYREDLPAGAASGALSAASVATTDACIQDKYRYMYQKVMQVSTELDDIIEVSVARIQERHNIEEIAHLGMPHQSPVVVAGRICCDSDAKLNDKSVVLESSFRSSSGARMPLDLSELPSYALFPGQIVAVEGTNTTGNSFVATRIYHDASAQEAFSQIRDLARFYVRGDGFSAQTSAPTRGLVAVGPFTPSNDLSYQPLSDFVSLVEAENPEIVILVGPFIDAVHPEVAAGNFGCSYERLFAETVIPAIARLLASTSAKIVLVPSLRDVHHDPVLPQPPLSIAQDDAGADVFANERVLCVSNPATIKINELNVGITSVDVLMHIGSEEISRIPPGIASDRLGRLSAHLIQQRSLYPLYPAPCGTNLEVGPLQDTAMADAPDVLIIPSDLKFFARVSTKRTLLCDGLSPAMSTATIM # ORIGINAL: g2933.t1 original gene structure, not modified by PASA NODE_18656_length_174_cov_85.2121_potentialcontaminant AUGUSTUS gene 1 174 . - . ID=g2933;Name=g2933.t1 NODE_18656_length_174_cov_85.2121_potentialcontaminant AUGUSTUS mRNA 1 174 . - . ID=g2933.t1;Parent=g2933;Name=g2933.t1 NODE_18656_length_174_cov_85.2121_potentialcontaminant AUGUSTUS exon 1 174 . - . ID=g2933.t1.exon1;Parent=g2933.t1 NODE_18656_length_174_cov_85.2121_potentialcontaminant AUGUSTUS CDS 1 174 . - 0 ID=cds.g2933.t1;Parent=g2933.t1 #PROT g2933.t1 g2933 CDECSSEERLVSGVGGSVKCDERGTRSGVGSHECDECSSEERLVSGVGGSVKCDERGT # PASA_UPDATE: g12423.t1, single gene model update, valid-1, status:[pasa:asmbl_1772,status:12],[pasa:asmbl_1775,status:12], valid-1 NODE_1498_length_10916_cov_41.6912 . gene 9771 10916 . + . ID=g12423;Name=g12423.t1 NODE_1498_length_10916_cov_41.6912 . mRNA 9771 10916 . + . ID=g12423.t1;Parent=g12423;Name=g12423.t1 NODE_1498_length_10916_cov_41.6912 . five_prime_UTR 9771 10109 . + . ID=g12423.t1.utr5p1;Parent=g12423.t1 NODE_1498_length_10916_cov_41.6912 . exon 9771 10349 . + . ID=g12423.t1.exon1;Parent=g12423.t1 NODE_1498_length_10916_cov_41.6912 . CDS 10110 10349 . + 0 ID=cds.g12423.t1;Parent=g12423.t1 NODE_1498_length_10916_cov_41.6912 . exon 10758 10916 . + . ID=g12423.t1.exon2;Parent=g12423.t1 NODE_1498_length_10916_cov_41.6912 . CDS 10758 10916 . + 0 ID=cds.g12423.t1;Parent=g12423.t1;3_prime_partial=true #PROT g12423.t1 g12423 MDDLSRKGAYTEQWVHLQQQQQQQHHHHQQQQQQQQPEHSSKESAIRSPPQALAGQSTEMNAQAAVMAMMHQQQTPGMSQFVYPQNLTPLAYNVTPQQYQALQQQQQQQQQQQQQQQQQQQQQLQAQPLQSSF # PASA_UPDATE: g12422.t1, single gene model update, valid-1, status:[pasa:asmbl_1773,status:12],[pasa:asmbl_1774,status:12], valid-1 NODE_1498_length_10916_cov_41.6912 . gene 4939 8155 . + . ID=g12422;Name=g12422.t1 NODE_1498_length_10916_cov_41.6912 . mRNA 4939 8155 . + . ID=g12422.t1;Parent=g12422;Name=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 4939 5028 . + . ID=g12422.t1.exon1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 4939 5028 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 5200 5305 . + . ID=g12422.t1.exon2;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 5200 5305 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 5462 5548 . + . ID=g12422.t1.exon3;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 5462 5548 . + 2 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 5691 5752 . + . ID=g12422.t1.exon4;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 5691 5752 . + 2 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 5926 5998 . + . ID=g12422.t1.exon5;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 5926 5998 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 6221 6297 . + . ID=g12422.t1.exon6;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 6221 6297 . + 2 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 6515 6663 . + . ID=g12422.t1.exon7;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 6515 6663 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 6954 7070 . + . ID=g12422.t1.exon8;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 6954 7070 . + 1 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 7309 7420 . + . ID=g12422.t1.exon9;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 7309 7420 . + 1 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 7587 7649 . + . ID=g12422.t1.exon10;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 7587 7649 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . exon 7978 8155 . + . ID=g12422.t1.exon11;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . CDS 7978 8064 . + 0 ID=cds.g12422.t1;Parent=g12422.t1 NODE_1498_length_10916_cov_41.6912 . three_prime_UTR 8065 8155 . + . ID=g12422.t1.utr3p1;Parent=g12422.t1 #PROT g12422.t1 g12422 MRTDSTSRLPADVDPTKVSLAYGDRALPKLNRELRGADLLSRQRAIMALCTLLHNPEYIVEALNNGIDATLTDLLSDEDDCMRQKSTEAWYILCGHAVGRIAFVKNMSVVPLSNLFEDPLAIVRKNAHQAVYMSTTSAEGAENVVRALLVPKLVRRLKEEVDEIKVLILSTLYNCIRFDPIPALCNDSMEVFTDLLSHSNPTLREHAANNIMVLSIPFEGKKYACKANATPMLIALLEDPNADVRSSAAGALMSITIAKDGKYDAIASGGIEALMKTIEDNDSRVKLNTIKAITNLAEAPDGRVALSCLVPQLKDIIEKSSSDLLVRSAKIAVDVLTWKP* # ORIGINAL: g12421.t1 original gene structure, not modified by PASA NODE_1498_length_10916_cov_41.6912 AUGUSTUS gene 177 4365 . - . ID=g12421;Name=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS mRNA 177 4365 . - . ID=g12421.t1;Parent=g12421;Name=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 4273 4365 . - . ID=g12421.t1.exon1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 4273 4365 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 3975 4079 . - . ID=g12421.t1.exon2;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 3975 4079 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 3297 3870 . - . ID=g12421.t1.exon3;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 3297 3870 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 2561 3123 . - . ID=g12421.t1.exon4;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 2561 3123 . - 2 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 1974 2327 . - . ID=g12421.t1.exon5;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 1974 2327 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 1616 1690 . - . ID=g12421.t1.exon6;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 1616 1690 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 1376 1495 . - . ID=g12421.t1.exon7;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 1376 1495 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 974 1110 . - . ID=g12421.t1.exon8;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 974 1110 . - 0 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 583 714 . - . ID=g12421.t1.exon9;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 583 714 . - 1 ID=cds.g12421.t1;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS exon 177 324 . - . ID=g12421.t1.exon10;Parent=g12421.t1 NODE_1498_length_10916_cov_41.6912 AUGUSTUS CDS 177 324 . - 1 ID=cds.g12421.t1;Parent=g12421.t1 #PROT g12421.t1 g12421 MVKHDAKFAEKLSILNHHGVGICTRLYNVKKTFESAHARPAILSDKALDPLLKGALKKFPQLDVVKLNGTPVQARRSEIVKALEPHYFTFVDALEFRDVAIDLLSSLAAAVDTFDVTENFEMTKALLQLVSSYISALILISRIEDRKLIACTFATVHQFQYSNNEPNFPRLAQWMNDYDVPLRKLQDDFFPLSKAISGAVLSMKTVYARLHGSADSLRKNNILALLTAPNQLSAPTVSEDVLADTLSMDEITKWILFVYSVSPGELQNPDAHELLRQALVEGFVTPVFRDESMCAHVEIDNAIINYKGPAKLDKIKKALGDFAVAAVQSSGSFHAERREYVRQALYQLSRLFADKPGILGPKMLTAVIVLNMARDEVVWYIRHFEQQPPKTKAKMREEDFQDATIGEIIHLILELAGIVRQHSKVIQRYYVQFLSGYDLQQVKAQDVISRAAVPDEESLLLNAVTEYLASLSVRQVDEGPRFNLDGLRLDWFRLQSLMSGTKAPLSMSQNLTLVKRLNAAMFHSKCVDSVEQLVRDSCGLGDMWFFRKVVADHFEKSLAHPGQALYSGAFPRMCVDFLQVVHDFLPEEKAVVGSGAAKLAQTFLEKIAAMAANALGFFCNEHARLNAQLASSNGVTPLLEKREKPTAAKKGGAPKKHIPPGAESHPRNSAMIQGLPEKTQVLADLCIALNHSETITIYDTQLGPREFLVEAIEDFFGKALVGIMKYDLTEQTIRRPSSMLNAVNAFMSSLTSLENYGAFLPPNWVY* # PASA_UPDATE: g4327.t1, single gene model update, valid-1, status:[pasa:asmbl_4868,status:3], valid-1 NODE_2708_length_5378_cov_41.4309 . gene 3419 4437 . + . ID=g4327;Name=g4327.t1 NODE_2708_length_5378_cov_41.4309 . mRNA 3419 4437 . + . ID=g4327.t1;Parent=g4327;Name=g4327.t1 NODE_2708_length_5378_cov_41.4309 . five_prime_UTR 3419 3556 . + . ID=g4327.t1.utr5p1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . exon 3419 3592 . + . ID=g4327.t1.exon1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . CDS 3557 3592 . + 0 ID=cds.g4327.t1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . exon 3772 3831 . + . ID=g4327.t1.exon2;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . CDS 3772 3831 . + 0 ID=cds.g4327.t1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . exon 4032 4118 . + . ID=g4327.t1.exon3;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . CDS 4032 4118 . + 0 ID=cds.g4327.t1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . exon 4275 4437 . + . ID=g4327.t1.exon4;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . CDS 4275 4409 . + 0 ID=cds.g4327.t1;Parent=g4327.t1 NODE_2708_length_5378_cov_41.4309 . three_prime_UTR 4410 4437 . + . ID=g4327.t1.utr3p1;Parent=g4327.t1 #PROT g4327.t1 g4327 MLGLPKIDVPPTDFKGQKLAEEIYQYTIAAFAIIGFVIGFVTEQFTHSVYIFAFGIVLSAVLVLPPWPFYRRHSIRWLQAEGKKSSPSSSSEPAQDDLSAAKKKK* # PASA_UPDATE: g4326.t1, single gene model update, valid-1, status:[pasa:asmbl_4869,status:3], valid-1 NODE_2708_length_5378_cov_41.4309 . gene 170 3239 . - . ID=g4326;Name=g4326.t1 NODE_2708_length_5378_cov_41.4309 . mRNA 170 3239 . - . ID=g4326.t1;Parent=g4326;Name=g4326.t1 NODE_2708_length_5378_cov_41.4309 . five_prime_UTR 3134 3239 . - . ID=g4326.t1.utr5p1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 2558 3239 . - . ID=g4326.t1.exon1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 2558 3133 . - 0 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 1824 2303 . - . ID=g4326.t1.exon2;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 1824 2303 . - 0 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 1314 1622 . - . ID=g4326.t1.exon3;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 1314 1622 . - 0 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 892 979 . - . ID=g4326.t1.exon4;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 892 979 . - 0 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 511 654 . - . ID=g4326.t1.exon5;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 511 654 . - 2 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . exon 170 352 . - . ID=g4326.t1.exon6;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . CDS 330 352 . - 2 ID=cds.g4326.t1;Parent=g4326.t1 NODE_2708_length_5378_cov_41.4309 . three_prime_UTR 170 329 . - . ID=g4326.t1.utr3p1;Parent=g4326.t1 #PROT g4326.t1 g4326 MADGSKSAGSRSLAGAPAASPGQPPTGVDDYVMLEKIGSGSYSVVHRAKHRDTGNVVAAKCISRKKIGRDGVDNIVAEISILQKADHPHIVRLLDFRWDTSSVWLIMEHCSGGDLARYIAAKGRLSEPVARHFLRQLASALRFLHSIGVTHCDLKPSNILLLSRERPVLKLADFGFAQHLTDADKALNLRGSLLYMAPEIIVSYVSSLPAIDAESALGAPCNRGYDSRVDLWSVGVILYEALFGKAPFHSTSEADVIAKLQSNEPVAMPEAVAGVHLSFNCRDLLLRLLKRRPDERISYADFFAHPFVDLEHLPSGDSLEKAIDILSAATAKDRDGDVREAVHLYTQGIEFLLAAVQFEQNAYRKDGLRKQVRQYLERAEVLKNKKTLTEKTGPQINRQGSVGRMHAAQSRDGGVAPAGGVDDHDSYARPTNDADLRSLAGVSESIATALYETEEASRADRLENFPDALARYGRAIGHWLAAGNDPKLAAHRRRIAAEATRLMDRAEDLKLSLGRRSLESPTPSLFDGSFLDGGACCIQ* # PASA_UPDATE: g6462.t1, single gene model update, valid-1, status:[pasa:asmbl_7061,status:12], valid-1 NODE_4176_length_2074_cov_18.919 . gene 90 1976 . - . ID=g6462;Name=g6462.t1 NODE_4176_length_2074_cov_18.919 . mRNA 90 1976 . - . ID=g6462.t1;Parent=g6462;Name=g6462.t1 NODE_4176_length_2074_cov_18.919 . five_prime_UTR 1951 1976 . - . ID=g6462.t1.utr5p1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . exon 1794 1976 . - . ID=g6462.t1.exon1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . CDS 1794 1950 . - 0 ID=cds.g6462.t1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . exon 1196 1375 . - . ID=g6462.t1.exon2;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . CDS 1196 1375 . - 2 ID=cds.g6462.t1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . exon 853 1059 . - . ID=g6462.t1.exon3;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . CDS 853 1059 . - 2 ID=cds.g6462.t1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . exon 436 633 . - . ID=g6462.t1.exon4;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . CDS 436 633 . - 2 ID=cds.g6462.t1;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . exon 90 144 . - . ID=g6462.t1.exon5;Parent=g6462.t1 NODE_4176_length_2074_cov_18.919 . CDS 90 144 . - 2 ID=cds.g6462.t1;Parent=g6462.t1;3_prime_partial=true #PROT g6462.t1 g6462 MMFVDTDVFSNDEIANIIISGSDLAVTPSTSATQMYSYFNTDGHYRPATVSWEYKLRCNTDYYGDCTKLCRPATNCSGHGVCAANGDCVCSGNYTGSACSACKGSYYGPQCQACLCPSSRGTCNDTISGNGLCASCKNVTLATPLCTPCECGVGGKCSSGPTGTGKCLYCNATYYGAKCDKMRTCVNGQWEGGMNQTIGTCSTCFPGWWGPNCDKACTCDRGTCDLTNGLCVNGTCQPFYFGRNCSSLCNNTDCTCNANTGGDGT # PASA_UPDATE: g2147.t1, single gene model update, valid-1, status:[pasa:asmbl_7110,status:12], valid-1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . gene 513 1750 . + . ID=g2147;Name=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . mRNA 513 1750 . + . ID=g2147.t1;Parent=g2147;Name=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . five_prime_UTR 513 550 . + . ID=g2147.t1.utr5p1;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . exon 513 625 . + . ID=g2147.t1.exon1;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . CDS 551 625 . + 0 ID=cds.g2147.t1;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . exon 879 1262 . + . ID=g2147.t1.exon2;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . CDS 879 1262 . + 0 ID=cds.g2147.t1;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . exon 1526 1750 . + . ID=g2147.t1.exon3;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . CDS 1526 1687 . + 0 ID=cds.g2147.t1;Parent=g2147.t1 NODE_4218_length_2011_cov_31.156_potentialcontaminant . three_prime_UTR 1688 1750 . + . ID=g2147.t1.utr3p1;Parent=g2147.t1 #PROT g2147.t1 g2147 MLMPPPYAENHDSYLRRYLETGEKQIIGIGREVIGLRKDGTQFPMELAVSEVKAETYHFFTGFCRDITERKAHERRLMEETRKLTGVFESCLDGIIIIGSDGTVQSLNDAAVRMFGYTRADVVGRNVKMLMPADYAEHHDSYLQRYLETGQKRVIGIGREVEGQHKNGRRFPISLSVSEVNLGDVRLFAGVVRDINDTSTGLMLRW* # PASA_UPDATE: g239.t1, single gene model update, valid-1, status:[pasa:asmbl_4392,status:3], valid-1 # PASA_UPDATE: g239.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4391,status:3], valid-1 NODE_2473_length_6152_cov_20.5453 . gene 185 4419 . + . ID=g239;Name=g239.t1 NODE_2473_length_6152_cov_20.5453 . mRNA 185 4419 . + . ID=g239.t1;Parent=g239;Name=g239.t1 NODE_2473_length_6152_cov_20.5453 . five_prime_UTR 185 306 . + . ID=g239.t1.utr5p1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . exon 185 1656 . + . ID=g239.t1.exon1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . CDS 307 1656 . + 0 ID=cds.g239.t1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . exon 1971 3102 . + . ID=g239.t1.exon2;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . CDS 1971 3102 . + 0 ID=cds.g239.t1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . exon 3209 3351 . + . ID=g239.t1.exon3;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . CDS 3209 3351 . + 2 ID=cds.g239.t1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . exon 3511 4419 . + . ID=g239.t1.exon4;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . CDS 3511 4296 . + 0 ID=cds.g239.t1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . three_prime_UTR 4297 4419 . + . ID=g239.t1.utr3p1;Parent=g239.t1 NODE_2473_length_6152_cov_20.5453 . mRNA 185 4419 . + . ID=g239.t1.1.5b6be70b;Parent=g239;Name=g239.t1 NODE_2473_length_6152_cov_20.5453 . five_prime_UTR 185 306 . + . ID=g239.t1.1.5b6be70b.utr5p1;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . exon 185 1656 . + . ID=g239.t1.1.5b6be70b.exon1;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . CDS 307 1656 . + 0 ID=cds.g239.t1.1.5b6be70b;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . exon 1971 3102 . + . ID=g239.t1.1.5b6be70b.exon2;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . CDS 1971 3102 . + 0 ID=cds.g239.t1.1.5b6be70b;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . exon 3209 4419 . + . ID=g239.t1.1.5b6be70b.exon3;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . CDS 3209 3396 . + 2 ID=cds.g239.t1.1.5b6be70b;Parent=g239.t1.1.5b6be70b NODE_2473_length_6152_cov_20.5453 . three_prime_UTR 3397 4419 . + . ID=g239.t1.1.5b6be70b.utr3p1;Parent=g239.t1.1.5b6be70b #PROT g239.t1 g239 MSGHHDSVGEVHVELQAFNDNDNSDHTGLHRRRSSSNVEGHGAGGLAGPALIRQNTSREVPRAFAELSIRLEESVRRTAGAGASSNIDRVDSLRAIRAGRTEVTGPQAKASAAPEDSPDAESWVASCLRWWKWPIGAKKREAPGKSAMLSAATYVAHEHLLTMDDLVHELEVEIRCPTSPELGPGVSNADAVKRMQANGMNRLTPAKKKSPLLQFLREFTSPFMLLLLVCGALCFATYGIDPNKDKTNIWLGVVLFALVVFTCVVEFYQHHKAAKIMEGFSKLLPQKSRVVREGRPIVIPAEEIVVGDIVLLVAGDKVPADLRVITGQELKVDNSSLTGECEPQPRSGEATSDNPFETENIAFYSTMVTDGTGVGVVIRTGDNTLIGQIAKISSMESNEVTTLDIEIRKFVRVVAVMTLAQAVIFCIVAIIRGRTVTQTMLDVMGILVANVPQGLPATVSTCLVLIARRMAARNVFVKRLSSIETLGSCSVIVSDKTGTITMNKMTAVHAYCNGTVTRIPRFEVTALDAAGTDAGESGVTSGMFLREDNAANGALFRAAALCSRADYEIVDGIRKVVADASETAIFNYTEAVVDTIAMRAAYKKLFEIPFNSKNKFQLSIHAMPTEPSTHLLVFKGAPEILITRCSSVLMASSETPVALGDSERATIQRAVDDLAGCGERVLAFAHRVIDVKHGKEAPYTRTTEGANFPEEGYVFLGLISLIDPPKANVREAIATCRSAGITVIMATGDHPKTAAAIAFDIGLITRAGQETGSSIVVTGTELATMTPEQLNETLKKQEIVFARTTPQQKLLIVEALQRLEKIVAVTGDGVNDSPALKQADIGVAMGISGSDVAKEAADIILMDDSFASIVVGIEQGRLLFANLRKSVAYTVTHLTPEVFPYVLFLLGGFPIALSSFLILFIDLGTELAPAIAFANETAESNIMRVPPRNAKTERMVSTQALTYAYLQFGVLEIIPSMLCFFYVMNAHGFPPNSLPNSAADYFSLTSDDYVVNGITYTAAEQVHALQKAQSACYAAIAMTQIANLFTCKTRRSSLFKHGIMGNKVLLRSILISMAIMVFVVFLPALNDGIGSSPPTPAYMWLMPLPFMVVFFFLFEAKKYGLRHLPTTSWFHRIFFF* #PROT g239.t1.1.5b6be70b g239 MSGHHDSVGEVHVELQAFNDNDNSDHTGLHRRRSSSNVEGHGAGGLAGPALIRQNTSREVPRAFAELSIRLEESVRRTAGAGASSNIDRVDSLRAIRAGRTEVTGPQAKASAAPEDSPDAESWVASCLRWWKWPIGAKKREAPGKSAMLSAATYVAHEHLLTMDDLVHELEVEIRCPTSPELGPGVSNADAVKRMQANGMNRLTPAKKKSPLLQFLREFTSPFMLLLLVCGALCFATYGIDPNKDKTNIWLGVVLFALVVFTCVVEFYQHHKAAKIMEGFSKLLPQKSRVVREGRPIVIPAEEIVVGDIVLLVAGDKVPADLRVITGQELKVDNSSLTGECEPQPRSGEATSDNPFETENIAFYSTMVTDGTGVGVVIRTGDNTLIGQIAKISSMESNEVTTLDIEIRKFVRVVAVMTLAQAVIFCIVAIIRGRTVTQTMLDVMGILVANVPQGLPATVSTCLVLIARRMAARNVFVKRLSSIETLGSCSVIVSDKTGTITMNKMTAVHAYCNGTVTRIPRFEVTALDAAGTDAGESGVTSGMFLREDNAANGALFRAAALCSRADYEIVDGIRKVVADASETAIFNYTEAVVDTIAMRAAYKKLFEIPFNSKNKFQLSIHAMPTEPSTHLLVFKGAPEILITRCSSVLMASSETPVALGDSERATIQRAVDDLAGCGERVLAFAHRVIDVKHGKEAPYTRTTEGANFPEEGYVFLGLISLIDPPKANVREAIATCRSAGITVIMATGDHPKTAAAIAFDIGLITRAGQETGSSIVVTGTELATMTPEQLNETLKKQEIVFARTTPQQKLLIVEALQRLEKIVAVTGDGVNDSPALKQADIGVAMGISGSDVAKEAADIILMDDSFASIVVGIEQVRVVWDAGMPDISQ* # ORIGINAL: g1443.t1 original gene structure, not modified by PASA NODE_3330_length_3717_cov_42.0398 AUGUSTUS gene 1606 1923 . - . ID=g1443;Name=g1443.t1 NODE_3330_length_3717_cov_42.0398 AUGUSTUS mRNA 1606 1923 . - . ID=g1443.t1;Parent=g1443;Name=g1443.t1 NODE_3330_length_3717_cov_42.0398 AUGUSTUS exon 1606 1923 . - . ID=g1443.t1.exon1;Parent=g1443.t1 NODE_3330_length_3717_cov_42.0398 AUGUSTUS CDS 1606 1923 . - 0 ID=cds.g1443.t1;Parent=g1443.t1 #PROT g1443.t1 g1443 MQSRWRKNAKMRPSFQDIFTRLDKAMADQHGHRPASTTAEYELTTPAGSGADSLSVKTNPMLLEERPDADTATLTGKGVAQSEYAEYALTGGGDAYVEYEMTSHA* # PASA_UPDATE: g1442.t1, single gene model update, valid-1, status:[pasa:asmbl_5898,status:12], valid-1 NODE_3330_length_3717_cov_42.0398 . gene 181 1076 . - . ID=g1442;Name=g1442.t1 NODE_3330_length_3717_cov_42.0398 . mRNA 181 1076 . - . ID=g1442.t1;Parent=g1442;Name=g1442.t1 NODE_3330_length_3717_cov_42.0398 . five_prime_UTR 1005 1076 . - . ID=g1442.t1.utr5p1;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . exon 942 1076 . - . ID=g1442.t1.exon1;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . CDS 942 1004 . - 0 ID=cds.g1442.t1;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . exon 568 742 . - . ID=g1442.t1.exon2;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . CDS 568 742 . - 0 ID=cds.g1442.t1;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . exon 181 332 . - . ID=g1442.t1.exon3;Parent=g1442.t1 NODE_3330_length_3717_cov_42.0398 . CDS 181 332 . - 2 ID=cds.g1442.t1;Parent=g1442.t1;3_prime_partial=true #PROT g1442.t1 g1442 MSSVATMLRQSAWSSAFHARMNLSLYLSTRRHATTSSNSHYKYDLAVVGGGIVGLATAREVLLRYPNLRVAVLEKEDKLAQHQSGHNSGVIHAGIYYPKGSLKARLCVEGLNLAYKYLDEKKIPYRKCGK # ORIGINAL: g4475.t1 original gene structure, not modified by PASA NODE_3748_length_2839_cov_43.0478 AUGUSTUS gene 724 2466 . - . ID=g4475;Name=g4475.t1 NODE_3748_length_2839_cov_43.0478 AUGUSTUS mRNA 724 2466 . - . ID=g4475.t1;Parent=g4475;Name=g4475.t1 NODE_3748_length_2839_cov_43.0478 AUGUSTUS exon 724 2466 . - . ID=g4475.t1.exon1;Parent=g4475.t1 NODE_3748_length_2839_cov_43.0478 AUGUSTUS CDS 724 2466 . - 0 ID=cds.g4475.t1;Parent=g4475.t1 #PROT g4475.t1 g4475 MDTTSCHIDPSELNALIQRACERRRSRREAAHIEEDRMRCALIAVDSISRAIASPASFASVPWDSISRALSGESNLIASLARRTALCSIVNNTLVSALTCSDDIGPSQSESESALDTIASHFMAIEMHTAVFTFAKEVCDVCCSSSEESDNRAAHVAAFSSAFSCIGTLAMVDAAFLAHMAGTDLAGMLSLIRTSFENAAFSWRRIRGWCSHVRLVWQIIESAEVIASWCDDAHTVSHQPTHVTVISALALSLGGCLTQCLSDWAHTNDGEDWTSEQRRRFLMAAHVIAVITWDAGIAINPGCISAGVACAVLKHAASSGDADTQTACVALLAAFSRHIWRASVSQLQTLLSRENALSRAMDVMLVVVSLVQDPHVTSQAQIYVTMALSYLLADPDLRERALVTWPCIPTCLLAMSFRASAASDDRFHVGCIGGDCARDSVPVESGITNVLSGFTVFGYESSLVSYASPSVAMASSRLFRALWVSHSCVAIASILTSHSATTYDLSGIACVFAESLAHALAVCGDDIPMHVRSESLRAICGQCVLNEDTSTVHETPDVDYGGDVSTHAVCALVQQSLLQE* # PASA_UPDATE: g6338.t1, single gene model update, valid-1, status:[pasa:asmbl_9427,status:12], valid-1 NODE_799_length_17593_cov_40.7122 . gene 15375 17027 . - . ID=g6338;Name=g6338.t1 NODE_799_length_17593_cov_40.7122 . mRNA 15375 17027 . - . ID=g6338.t1;Parent=g6338;Name=g6338.t1 NODE_799_length_17593_cov_40.7122 . five_prime_UTR 16968 17027 . - . ID=g6338.t1.utr5p1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . exon 16887 17027 . - . ID=g6338.t1.exon1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . CDS 16887 16967 . - 0 ID=cds.g6338.t1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . exon 16455 16495 . - . ID=g6338.t1.exon2;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . CDS 16455 16495 . - 0 ID=cds.g6338.t1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . exon 16031 16186 . - . ID=g6338.t1.exon3;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . CDS 16031 16186 . - 1 ID=cds.g6338.t1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . exon 15823 15873 . - . ID=g6338.t1.exon4;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . CDS 15823 15873 . - 1 ID=cds.g6338.t1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . exon 15375 15542 . - . ID=g6338.t1.exon5;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . CDS 15446 15542 . - 1 ID=cds.g6338.t1;Parent=g6338.t1 NODE_799_length_17593_cov_40.7122 . three_prime_UTR 15375 15445 . - . ID=g6338.t1.utr3p1;Parent=g6338.t1 #PROT g6338.t1 g6338 MTRGKDVTERLFDDINWIVVQSLKSVQAVILSDKHCFELYGYDIIIDSNLKPWLLEINASPSLTATTAHDRILKHALINDLLGIVLQDSEVPDVKVKAQHPRDLGQFELLYDEEAANLAEAEAQHARATSARRRQSSSSWK* # PASA_UPDATE: g6335.t1, single gene model update, valid-1, status:[pasa:asmbl_9428,status:3], valid-1 NODE_799_length_17593_cov_40.7122 . gene 4062 6566 . + . ID=g6335;Name=g6335.t1 NODE_799_length_17593_cov_40.7122 . mRNA 4062 6566 . + . ID=g6335.t1;Parent=g6335;Name=g6335.t1 NODE_799_length_17593_cov_40.7122 . five_prime_UTR 4062 4152 . + . ID=g6335.t1.utr5p1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 4062 4189 . + . ID=g6335.t1.exon1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 4153 4189 . + 0 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 4401 4532 . + . ID=g6335.t1.exon2;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 4401 4532 . + 2 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 4770 4834 . + . ID=g6335.t1.exon3;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 4770 4834 . + 2 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 5011 5160 . + . ID=g6335.t1.exon4;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 5011 5160 . + 0 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 5375 5449 . + . ID=g6335.t1.exon5;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 5375 5449 . + 0 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 5817 5896 . + . ID=g6335.t1.exon6;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 5817 5896 . + 0 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . exon 6160 6566 . + . ID=g6335.t1.exon7;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . CDS 6160 6382 . + 1 ID=cds.g6335.t1;Parent=g6335.t1 NODE_799_length_17593_cov_40.7122 . three_prime_UTR 6383 6566 . + . ID=g6335.t1.utr3p1;Parent=g6335.t1 #PROT g6335.t1 g6335 MFKMGAVVRKPQARKELIFGDFLRIAIIGERGSGKTCVWLRFTKNQFAFKHEPTTYEEVAVVTQRCVTEDSTGDVAHQVAHLVTCEIWDTPPNDIATTESSRNVLKDVDAIIVVFDSTKSDGLDKAVQLKRDVQNALRKSSKSAQVWMLLATKTDLGGMHHTISELEMQRAVEEGSFWGSERVSSMAVSEINLALKSLMLHLIGVKTASSKPLSEQIAAAEAEAAALSAAFAANAAEATRTAAVANATIASMA* # ORIGINAL: g6333.t1 original gene structure, not modified by PASA NODE_799_length_17593_cov_40.7122 AUGUSTUS gene 469 2033 . + . ID=g6333;Name=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS mRNA 469 2033 . + . ID=g6333.t1;Parent=g6333;Name=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 469 674 . + . ID=g6333.t1.exon1;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 469 674 . + 0 ID=cds.g6333.t1;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 842 944 . + . ID=g6333.t1.exon2;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 842 944 . + 1 ID=cds.g6333.t1;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 1043 1227 . + . ID=g6333.t1.exon3;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 1043 1227 . + 0 ID=cds.g6333.t1;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 1616 2033 . + . ID=g6333.t1.exon4;Parent=g6333.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 1616 2033 . + 1 ID=cds.g6333.t1;Parent=g6333.t1 #PROT g6333.t1 g6333 MDIGDKHAGAPAFSGLDGRELVAIIKFGGSAVTDKDTFESLRNEALDHAASLVARVFATGKCVVVHGAGSFGHFTASEYGVAKGFTSPEWKKGFVETRLSVTKLSHIVTSALVGKGVPAVSLPGVVWTTASREVTSDCLSCISKLLDAGFVPVLHGDCALDETLGCTILSGDVIIAHLSRALRPRRVVFLSDVNGIYDKNPSQHPESAHIISRIVASEWLSDRKRIRNSDVTQDDKQDCVNVTVRAHDVTGGLPAKILRACEIALACNINVFIAGVASLSAERACVDGIADGGSTVVTCNDAP* # ORIGINAL: g6334.t1 original gene structure, not modified by PASA NODE_799_length_17593_cov_40.7122 AUGUSTUS gene 2516 3691 . - . ID=g6334;Name=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS mRNA 2516 3691 . - . ID=g6334.t1;Parent=g6334;Name=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 3430 3691 . - . ID=g6334.t1.exon1;Parent=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 3430 3691 . - 0 ID=cds.g6334.t1;Parent=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 3083 3309 . - . ID=g6334.t1.exon2;Parent=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 3083 3309 . - 2 ID=cds.g6334.t1;Parent=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 2516 2872 . - . ID=g6334.t1.exon3;Parent=g6334.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 2516 2872 . - 0 ID=cds.g6334.t1;Parent=g6334.t1 #PROT g6334.t1 g6334 MLPSVRVGRVLSGLRWTAGVRSHMTMRAPPSESAHNVETGTVDDASRRKTRMNETTSIHNYTPISPFQRISLAVGSAFAALNDPTRDDMIAVLGETTGTLALRLMHRRMKMDPIGSEILATKPRVSSSVVDLDRLRTLPSNTFGCAYASFLDNHGISPDTRRQVRYVEDPELAYVLQRHREIHDFVHTILGLDEISVHAEIAVKWVEMMQTGLPVALLSAFVGPLGLKSDDRRVLCDKYLPWAVSVGRDARFLMNVRYEDHFEDDMDELRRSLGISEPCPR* # ORIGINAL: g6337.t1 original gene structure, not modified by PASA NODE_799_length_17593_cov_40.7122 AUGUSTUS gene 11066 14555 . + . ID=g6337;Name=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS mRNA 11066 14555 . + . ID=g6337.t1;Parent=g6337;Name=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 11066 11109 . + . ID=g6337.t1.exon1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 11066 11109 . + 0 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 11257 11432 . + . ID=g6337.t1.exon2;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 11257 11432 . + 1 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 11703 11809 . + . ID=g6337.t1.exon3;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 11703 11809 . + 2 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 12416 12532 . + . ID=g6337.t1.exon4;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 12416 12532 . + 0 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 12782 12840 . + . ID=g6337.t1.exon5;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 12782 12840 . + 0 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 13094 13178 . + . ID=g6337.t1.exon6;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 13094 13178 . + 1 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 13305 13375 . + . ID=g6337.t1.exon7;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 13305 13375 . + 0 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 13547 13657 . + . ID=g6337.t1.exon8;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 13547 13657 . + 1 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 14111 14179 . + . ID=g6337.t1.exon9;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 14111 14179 . + 1 ID=cds.g6337.t1;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 14363 14555 . + . ID=g6337.t1.exon10;Parent=g6337.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 14363 14555 . + 1 ID=cds.g6337.t1;Parent=g6337.t1 #PROT g6337.t1 g6337 MAPPKPVPVKRPMFRRYSGERSWTEWIRDYHPDIATSVCMFVLVAAVIPAIQPVLARTFVMGHNVTTDAPAASDGETFYTFGRNDILNVAYYVLAWISFHAILEEAYLDSLARRLHLSRTKTGELHESGEVVIFHLITLVWGADLIAKGGQLAQSSLMWTDYPQPNMTFGTKFFFILQIAHWMHSAAEVFLMRARKEDVPRLVGEALGYVAFILFAYLGSFHRAGVVLIVVHSLAEFLFHVSRMADYSGRTTFAANASGLAGESEEWKPRAGSINTPLVRHLLLASVIALQLFLGFRQCRKHLAEPSLLSDLLLPKNARAAAGPRTKSKRATGASADEGEKSD* # ORIGINAL: g6336.t1 original gene structure, not modified by PASA NODE_799_length_17593_cov_40.7122 AUGUSTUS gene 7523 10259 . + . ID=g6336;Name=g6336.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS mRNA 7523 10259 . + . ID=g6336.t1;Parent=g6336;Name=g6336.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 7523 8896 . + . ID=g6336.t1.exon1;Parent=g6336.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 7523 8896 . + 0 ID=cds.g6336.t1;Parent=g6336.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS exon 9114 10259 . + . ID=g6336.t1.exon2;Parent=g6336.t1 NODE_799_length_17593_cov_40.7122 AUGUSTUS CDS 9114 10259 . + 0 ID=cds.g6336.t1;Parent=g6336.t1 #PROT g6336.t1 g6336 MFRRAYRALVVAVLFILFFLAMAFTRGLRLTADVVITRPETPSERSNGGFQPPTHIRYPIHPLPAQRRIIPPVVVPITGNESMCNVATVGPIASTGPSALCSWRGHFDFGGCPQLGWCPSGVMFRVTSNYNAIELADIVVGASQEVFPWHLPPKSDSQLWVSIAWEAAAYYPHFRTNFRKDRNLNEFPWDLTMGFDPGYFDLPINMLPNDPTVLLRPALSRSEKEGFVAYLSSNLITYSDRHSIVETFMGILANIDSFGAEFHTRDPPPEFTAASFSERFEAKVRLCSRYRFTLAIENALEPYYVTEKLFNALEAGSVPIYLGAPNVLDVWPIPDSFINMNDFPTLDDLAAFIIKVDTNEELYDSYLAWKKRPLPKAVYDLAKQSAYWNLCRACDVAKARLPAVAEVAISTWGDAVARVGLIPDGGVRDGSVDSGYNGPDDEVDLAKLLMDGAEKAAAALEDAERAKALEDAERAKALEDAERAKALEDAERAKALEDAERAKALEDAERAKALEDAERAKALEDAERAKALEDAERAKALENARAKALEDARAKALEGGDVVQHIVGRDTENTASEGGVVALPDRSVPAFQQPAVGKKLNEKLNVPKKPCCAKSPASKDDNALRVELEAPRIEPATVASPNVQVAPGASTGNAKQGGIVTPAVPVKPLQVTGEGLPRVNAAVNAVRQAIGGEKLSMSPMSQSIPSSQPRIEPAVLPDTASTSPSEGKAPTKSVSAKTMPRQPKLVVAVADSSNVRALPANSGSNAGAVPVVTRVDAGVRVSAADATSGEQSGRQPKAVAETAPRGRGNLSAGSTVSGQMAPGIDNNKQQQQQQQQQQQ* # PASA_UPDATE: g12412.t1, single gene model update, valid-1, status:[pasa:asmbl_6784,status:12],[pasa:asmbl_6785,status:12], valid-1 NODE_3972_length_2423_cov_55.1069 . gene 240 2307 . - . ID=g12412;Name=g12412.t1 NODE_3972_length_2423_cov_55.1069 . mRNA 240 2307 . - . ID=g12412.t1;Parent=g12412;Name=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 2194 2307 . - . ID=g12412.t1.exon1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 2194 2307 . - 0 ID=cds.g12412.t1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 1851 2071 . - . ID=g12412.t1.exon2;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 1851 2071 . - 0 ID=cds.g12412.t1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 1526 1691 . - . ID=g12412.t1.exon3;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 1526 1691 . - 1 ID=cds.g12412.t1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 967 1308 . - . ID=g12412.t1.exon4;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 967 1308 . - 0 ID=cds.g12412.t1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 713 823 . - . ID=g12412.t1.exon5;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 713 823 . - 0 ID=cds.g12412.t1;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . exon 240 369 . - . ID=g12412.t1.exon6;Parent=g12412.t1 NODE_3972_length_2423_cov_55.1069 . CDS 240 369 . - 0 ID=cds.g12412.t1;Parent=g12412.t1;3_prime_partial=true #PROT g12412.t1 g12412 MRKKFNSLQKEIDDHKGEIQKMFNEQKKLHSVIKSLEKDIAGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQIEPRENDIQTMKEQIQDMDRELERYHKENSNLELSIADVRLKLKAAEKEVQLERQKSRDSEAVARRFRTDLQEAVEHIQDPKELKESVKKLYQKHVGETEVRETGVDADIQREYNRQREYLERSVASLKHKLQKDMELHRADNIRIMQENVSLIREINDLRRELKAARQRIREYEMGTSEYLSLSLSLSLSCGACDKLLVQRVEVKLSGRKVGDVLNRLHLATPVERDGKVRAPCIPDAVRLKKGMVTDAVEKKRLLKHIQQEKGAEYSVDMR # ORIGINAL: g11472.t1 original gene structure, not modified by PASA NODE_3017_length_4526_cov_38.9802 AUGUSTUS gene 402 4526 . + . ID=g11472;Name=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS mRNA 402 4526 . + . ID=g11472.t1;Parent=g11472;Name=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 402 587 . + . ID=g11472.t1.exon1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 402 587 . + 2 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 796 973 . + . ID=g11472.t1.exon2;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 796 973 . + 2 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 1142 1580 . + . ID=g11472.t1.exon3;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 1142 1580 . + 1 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 1765 2411 . + . ID=g11472.t1.exon4;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 1765 2411 . + 0 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 2623 2767 . + . ID=g11472.t1.exon5;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 2623 2767 . + 1 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 3198 3266 . + . ID=g11472.t1.exon6;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 3198 3266 . + 0 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 3404 3674 . + . ID=g11472.t1.exon7;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 3404 3674 . + 0 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 3839 4050 . + . ID=g11472.t1.exon8;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 3839 4050 . + 2 ID=cds.g11472.t1;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS exon 4236 4526 . + . ID=g11472.t1.exon9;Parent=g11472.t1 NODE_3017_length_4526_cov_38.9802 AUGUSTUS CDS 4236 4526 . + 0 ID=cds.g11472.t1;Parent=g11472.t1 #PROT g11472.t1 g11472 CSRVLEKLLRASSHLHVRVFMDRLSGKYIRLLKDRYASHVVQTILTLAPPMVEVESRGSTQVDDEAGTLLPMHKLIIRMCGQIIEHPGSVIDVSLDSYGSHVIRVLFHLLAGVAMDELLVRSKSSRNYASAKKKVIVEETNAPAEAAGDPDERRPPKKEEPRKERHDVPAEFPEMLESLAKRFIQEAPLQGGIGLLSVHRMASPVLQTLLVALHGAGKAALCDGLCRDITKGKEGEDSGAHADGGGHVGRNLLRNEVGSHLLEKVLKLCSDDIFVRIFNNHFRGHIAELASHRSANYVVQHMLSSARHEAQVGMALDELKGEGTLESLLADGRVGVIQRLVEACVAYPKLQRTCAKAVMHAFHAKVAHQQKEIARLLCYLVAYETYKGIEPAAATTTAAAGDADAVMKDVDAKEEAAEADGREGGVGESLADTGKALSTETPPAPPVKAKADAPKWEIHMGGALVFQAFMTYDAVEGKPFFEGFLALTADELVQFAKHPVGSRVIDAFLKGNTDLKQKASLVRKLRGRYAELSMNKYGSHTVDMCWEKADVKTKEWMADEILSREEQLKNNFFALCVMRNCRMSAFKRRREDWIEQQAANERKKSLYADILGDEDPLRKKKETKADRKRAREDADKKALETASQVPVSSKLDSVMAALGFSNRAAEGNGDGEGNGEDDGSGDEELDALFGGRAAPNKRRRMDGGAGRATQQADGRDALAGGPMKRPAEDDEDAPHDATLEAVFAACSAGKRAPKRRKLAKDAPDNAAREESGAGLATRARAAIAAKPVPAAVPVVAVPGKTKKDKKGASGVA # PASA_UPDATE: g7956.t1, single gene model update, valid-1, status:[pasa:asmbl_4857,status:3], valid-1 NODE_2701_length_5407_cov_47.7363 . gene 590 2308 . + . ID=g7956;Name=g7956.t1 NODE_2701_length_5407_cov_47.7363 . mRNA 590 2308 . + . ID=g7956.t1;Parent=g7956;Name=g7956.t1 NODE_2701_length_5407_cov_47.7363 . five_prime_UTR 590 792 . + . ID=g7956.t1.utr5p1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . exon 590 865 . + . ID=g7956.t1.exon1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . CDS 793 865 . + 0 ID=cds.g7956.t1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . exon 979 1515 . + . ID=g7956.t1.exon2;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . CDS 979 1515 . + 2 ID=cds.g7956.t1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . exon 1654 1802 . + . ID=g7956.t1.exon3;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . CDS 1654 1802 . + 2 ID=cds.g7956.t1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . exon 1991 2308 . + . ID=g7956.t1.exon4;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . CDS 1991 2128 . + 0 ID=cds.g7956.t1;Parent=g7956.t1 NODE_2701_length_5407_cov_47.7363 . three_prime_UTR 2129 2308 . + . ID=g7956.t1.utr3p1;Parent=g7956.t1 #PROT g7956.t1 g7956 MADRRAGDTWKKRNLQPTTQHVSDGRNDLQGPPPRSNAGAGLSSQANVFVKQRYEGPGTPAPNTKLREAPPQNAASRGGTWSPSTGTASEPQERAQGRVHVPHGGRLGEVPGLSGSAVRGSFRIGDDAAGSGGNHSQRPSGARGPVDRPDGHRSHFNSSLSFQPRDDAGGQRGHRGAHEGGASTHAGSMGRTLTFTTETAVQPNHASLSRADHLRTTVDKPPRPHMRLYAPVQDHHDIISYRHSGGINPPPDKVFRDREARQREYESQIPRYHDIERQTTALVNTAPPRDQAVRRPAR* # PASA_UPDATE: g7957.t1, single gene model update, valid-1, status:[pasa:asmbl_4858,status:12], valid-1 NODE_2701_length_5407_cov_47.7363 . gene 2390 5183 . - . ID=g7957;Name=g7957.t1 NODE_2701_length_5407_cov_47.7363 . mRNA 2390 5183 . - . ID=g7957.t1;Parent=g7957;Name=g7957.t1 NODE_2701_length_5407_cov_47.7363 . five_prime_UTR 5170 5183 . - . ID=g7957.t1.utr5p1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 5019 5183 . - . ID=g7957.t1.exon1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 5019 5169 . - 0 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 4835 4857 . - . ID=g7957.t1.exon2;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 4835 4857 . - 2 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 4485 4671 . - . ID=g7957.t1.exon3;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 4485 4671 . - 0 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 4213 4286 . - . ID=g7957.t1.exon4;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 4213 4286 . - 2 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 3975 4017 . - . ID=g7957.t1.exon5;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 3975 4017 . - 0 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 3392 3495 . - . ID=g7957.t1.exon6;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 3392 3495 . - 2 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 3105 3167 . - . ID=g7957.t1.exon7;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 3105 3167 . - 0 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . exon 2390 2610 . - . ID=g7957.t1.exon8;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . CDS 2500 2610 . - 0 ID=cds.g7957.t1;Parent=g7957.t1 NODE_2701_length_5407_cov_47.7363 . three_prime_UTR 2390 2499 . - . ID=g7957.t1.utr3p1;Parent=g7957.t1 #PROT g7957.t1 g7957 MIQTTNNIINTTLYKAVVPESLLAWQRVRVASHMARNGGEWAHVVAKYNSGTYNNQYMVVDLSKFQPGKSLDDGALWVVEQIPSRVTSRDCTPILRDGYWSSYNVPFFEDIYAISGYPSLVNDHGPDYSHDLAPRAKIFRRDETLVNDLDSLKHIMRFNEYKTDPYSEKHAADSICARGDLEDTPGAYGCYDTKVTSYALAQKLISHAVNGPTAQDLPPFSWTPFNTTLHNGQPNVFNFGFEVMDPAWDKY* # PASA_UPDATE: g6007.t1, single gene model update, valid-1, status:[pasa:asmbl_3685,status:12],[pasa:asmbl_3686,status:12],[pasa:asmbl_3687,status:12],[pasa:asmbl_3688,status:12], valid-1 NODE_2175_length_7421_cov_34.164 . gene 4512 7421 . - . ID=g6007;Name=g6007.t1 NODE_2175_length_7421_cov_34.164 . mRNA 4512 7421 . - . ID=g6007.t1;Parent=g6007;Name=g6007.t1 NODE_2175_length_7421_cov_34.164 . five_prime_UTR 7420 7421 . - . ID=g6007.t1.utr5p1;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . exon 5911 7421 . - . ID=g6007.t1.exon1;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . CDS 5911 7419 . - 0 ID=cds.g6007.t1;Parent=g6007.t1;5_prime_partial=true NODE_2175_length_7421_cov_34.164 . exon 5274 5519 . - . ID=g6007.t1.exon2;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . CDS 5274 5519 . - 0 ID=cds.g6007.t1;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . exon 4512 5029 . - . ID=g6007.t1.exon3;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . CDS 4892 5029 . - 0 ID=cds.g6007.t1;Parent=g6007.t1 NODE_2175_length_7421_cov_34.164 . three_prime_UTR 4512 4891 . - . ID=g6007.t1.utr3p1;Parent=g6007.t1 #PROT g6007.t1 g6007 RQPLQSQTQPQTQTQTQQQQQQQQQQQQVQLIAQRSNSNARIPSNSYGNEGPFGVPSIAPFGDRDTPSRPIPATTTASASDDGLPNSVSGRSFSNPIGIPAQGVRDGSSVGAGSAARSEHGALYTTDTFHSQGLGGGYGMYGSSAGAGGGLGVGVGVGVGAGGGGGGGGGGGSLGTYGYVAYIPPSPSNNSFGGGQLPLPLTLPMKFASSATPPFFLPAMDYGSTPPKGSPFGAGESRGGGISGAPSLAPPASSIPYRGTVEGFGLPLHADAHTHTHTHSHGHSHASGGGSGGSVAVPMAPSHAVSAPAQSPLSDPNFMAKYLGGGGVGSGGAGGAGGVGFGSPGATPQTIPRRGSLPRDAVRTPHVTPFKNVGGSASVSNMHTDASGLLSSRTPSMQSLSSATQSPVSQPRAHHHVTGTSGLSGLSGLGSASALARQYAAGGDSFGSAGNLYKSSQTQLQQQQQQQQQQQQQAAAGFGSMPQAPGSVARDVAAQRRKYDDAQVGFVVGSSSPVDDDIAAFVARCQNAPQLTPFQSRPPMPSFGQSPFAAAGAPSSGGASGAVPLRQTPTGFSGLFDPSASTGSSVMLDSELSRYQQARSEFDLFTRELNESVTLSHAQFDGTKQSAIFH* # PASA_UPDATE: g6006.t1, single gene model update, valid-1, status:[pasa:asmbl_3683,status:12],[pasa:asmbl_3684,status:12], valid-1 NODE_2175_length_7421_cov_34.164 . gene 567 4301 . + . ID=g6006;Name=g6006.t1 NODE_2175_length_7421_cov_34.164 . mRNA 567 4301 . + . ID=g6006.t1;Parent=g6006;Name=g6006.t1 NODE_2175_length_7421_cov_34.164 . five_prime_UTR 567 567 . + . ID=g6006.t1.utr5p1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 567 651 . + . ID=g6006.t1.exon1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 568 651 . + 0 ID=cds.g6006.t1;Parent=g6006.t1;5_prime_partial=true NODE_2175_length_7421_cov_34.164 . exon 840 925 . + . ID=g6006.t1.exon2;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 840 925 . + 0 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 1305 1426 . + . ID=g6006.t1.exon3;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 1305 1426 . + 1 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 1718 1832 . + . ID=g6006.t1.exon4;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 1718 1832 . + 2 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 2249 2403 . + . ID=g6006.t1.exon5;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 2249 2403 . + 1 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 2677 2784 . + . ID=g6006.t1.exon6;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 2677 2784 . + 2 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 2979 3091 . + . ID=g6006.t1.exon7;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 2979 3091 . + 2 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 3532 3602 . + . ID=g6006.t1.exon8;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 3532 3602 . + 0 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . exon 3840 4301 . + . ID=g6006.t1.exon9;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . CDS 3840 3954 . + 1 ID=cds.g6006.t1;Parent=g6006.t1 NODE_2175_length_7421_cov_34.164 . three_prime_UTR 3955 4301 . + . ID=g6006.t1.utr3p1;Parent=g6006.t1 #PROT g6006.t1 g6006 TEGPKVVWLLLLVALFKIAITVFTYGMSVPAGIFIPSMAIGACVGRVVGIGVQQIVLENATSQVVHHACNSMEGCITPGLYAMIGAAAMLGGVTRMTVSLVVIIFELTGGLTYVLPVMLTVLASKWVGDAFGREGINDRVIRLNGYPFLSNKETFGSNILVAEVLKEVGTVRNLCLLYEKGNTVEGLEATLDQVEFNGFPVVTSPDEIVVVGFVGRRELRLALERARANLDVSGSTECTFGDVNDSDSGPPPVQLTHCLDPSPIQITEDSPMSFVVDLFRRLGLRYALVTGDGKLTGLLTKKDVLKFLAASNSSDGTSLVFF* # PASA_UPDATE: g7175.t1, single gene model update, valid-1, status:[pasa:asmbl_5621,status:12], valid-1 NODE_3146_length_4200_cov_35.6499 . gene 332 4119 . - . ID=g7175;Name=g7175.t1 NODE_3146_length_4200_cov_35.6499 . mRNA 332 4119 . - . ID=g7175.t1;Parent=g7175;Name=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 3988 4119 . - . ID=g7175.t1.exon1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 3988 4119 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 3386 3751 . - . ID=g7175.t1.exon2;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 3386 3751 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 2849 3201 . - . ID=g7175.t1.exon3;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 2849 3201 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 2631 2721 . - . ID=g7175.t1.exon4;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 2631 2721 . - 1 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 2335 2469 . - . ID=g7175.t1.exon5;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 2335 2469 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 1541 2119 . - . ID=g7175.t1.exon6;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 1541 2119 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 883 1251 . - . ID=g7175.t1.exon7;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 883 1251 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 610 734 . - . ID=g7175.t1.exon8;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 610 734 . - 0 ID=cds.g7175.t1;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . exon 332 403 . - . ID=g7175.t1.exon9;Parent=g7175.t1 NODE_3146_length_4200_cov_35.6499 . CDS 332 403 . - 1 ID=cds.g7175.t1;Parent=g7175.t1;3_prime_partial=true #PROT g7175.t1 g7175 MAKEAAKHLAEVDQLVDDDEDVNSKEVDEDNIAESAEADIDIYKEGYLTKQGGRVKTWKRRWFVIKDGQFAYFKSIQDGSKSGWLTKQGGSFKSWKKRYLVIKDAKLSYYKSDAEGEELLGTIDLRVGCTGVEDVATASKKTKKENSFGIVTSERTYYMFAETAEDAEEWLATIKKFHEATAEELKALSEQKIDMRNAQGIIELADILSIGTTQIPGKSHSFAIVAPNRVYNICAESDAEMNDWIKLLTPKKKTIGGTGDDENIIERGWLLKEGGAHKTHKKRWFTLKSEVLVYYKDATCAMTIGSIPLNSLCSVNPPDEMVAQSLNVWSFTLNARRRSYCLTAKTQADATRWVNAIQEAIDSKPPIETKTEKLINEIKNAKADDMDKIYAAYPILTYSPEPIKSSLLPLPYGDFGRDRNGNQVYGTLYDEAMMIFEALVHPEFIANPTPMVQRILQTCFDLPKLKNEIYCQVIKQTTNNPEPEGPVGLRDWNLLSVLCCSFLPARKYIRFLKFHLKRASERYPGTEIEKIANYCADNIGKIKQREYPASSDEIAAIKERRELPLTVYTLGGASVKVDINSFTSAGEVCEQVRNKLNMQGALNGFNLYECGTELDRSVEEKTMVCDILSRWERHKRGGTNPAEVNSWRLVFKLFCMYEPYSKITNAMESDLVFEQAHDTVLAKRFPCDESTMFKLAALRLQYVIGDADSSAQFDKQVSDLKRFFPGVPQGGGGGGGAASH # ORIGINAL: g13888.t1 original gene structure, not modified by PASA NODE_1191_length_13264_cov_41.5066 AUGUSTUS gene 12064 13228 . + . ID=g13888;Name=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS mRNA 12064 13228 . + . ID=g13888.t1;Parent=g13888;Name=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 12064 12487 . + . ID=g13888.t1.exon1;Parent=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 12064 12487 . + 0 ID=cds.g13888.t1;Parent=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 12678 12793 . + . ID=g13888.t1.exon2;Parent=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 12678 12793 . + 2 ID=cds.g13888.t1;Parent=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 13070 13228 . + . ID=g13888.t1.exon3;Parent=g13888.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 13070 13228 . + 0 ID=cds.g13888.t1;Parent=g13888.t1 #PROT g13888.t1 g13888 MLSARASVACARTAVAAVRLVAQSAATSARASRPAVVTASVLARGPHTSSALIAPARSLAVRHYTSATAHSVAETTEATETVDAIEVDAVEDVATGFELLGLNTKLVGVLSANGMSDPFPIQERAIPSLLKGNDILGRAETGSGKTLAFVLPLLHRLALKPPGKSPRAIIMSPTRELATQIWRECEKFDSSVNLRSLVCYGGVGYDQQVRRLREGVDIVIGTPGQSSKADVL* # ORIGINAL: g13885.t1 original gene structure, not modified by PASA NODE_1191_length_13264_cov_41.5066 AUGUSTUS gene 3367 8368 . - . ID=g13885;Name=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS mRNA 3367 8368 . - . ID=g13885.t1;Parent=g13885;Name=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 7589 8368 . - . ID=g13885.t1.exon1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 7589 8368 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 7191 7289 . - . ID=g13885.t1.exon2;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 7191 7289 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 6792 6959 . - . ID=g13885.t1.exon3;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 6792 6959 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 6326 6517 . - . ID=g13885.t1.exon4;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 6326 6517 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 5751 5855 . - . ID=g13885.t1.exon5;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 5751 5855 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 5259 5373 . - . ID=g13885.t1.exon6;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 5259 5373 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 4781 4861 . - . ID=g13885.t1.exon7;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 4781 4861 . - 2 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 4406 4560 . - . ID=g13885.t1.exon8;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 4406 4560 . - 2 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 3934 4050 . - . ID=g13885.t1.exon9;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 3934 4050 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 3747 3833 . - . ID=g13885.t1.exon10;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 3747 3833 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 3367 3648 . - . ID=g13885.t1.exon11;Parent=g13885.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 3367 3648 . - 0 ID=cds.g13885.t1;Parent=g13885.t1 #PROT g13885.t1 g13885 MLCADDDPGNAIHNVNVMTTANRTTQHHYHRHHSTQRDLEAAANDIAARQEESEKSRRRLVEQTRDFKKSASEDARKDVAVLLKGYQGEVDMLSRRSKAAEAALLDAYRRLAGAPDPYPALGDALRAQHLAQQRQGATMSREGEAELRRWKETAEEYRLELAQAKNQDITIAQLQRRVRELESNADSAVRVAAAEAEARIEAVHAARERELHEQQIQLATRLGVAEAAMKDLQGSLDRAHSEALLWRSRCDEMATGRSAEAELLAVELERAQQQLHSAEAHVTALQLEINECKNGAAALAMDGNAMSSSLESHRMEQRMDAMARNSLEADLAAKEREITMLVNELHAVQANLARIRQASESTVGALEDELSRKSAEIDQMRAQLMSCADYEDVRRELQILKSIEFADVHVATGVEGSAKTLEVLLLEKNRHLQSENTGLKNALSDGARALADAEERLSSTATLVSEQARLISQLESDLSQIRTVSTLQTSIEMQQNAIGNGLMSSINARSPSITHDDNVQLLPLSSAPMSPSPIAGDRESADAGILTIVASQRDRFRQRTAELEAENLHVQQTLSSLRNEIDAIRSDNVKLYEKIRFLETYQSKVTDSSDDTLRRYHNQYEEALNPFKEFSAKEQHRRYATLSSPEKATLNVGRFLLSNKYSRTFIFFYAILLHFLVFLVLGRMSYTEAQSSDMAIQCAELTEHMRTYHAPPVPGAAAAVLGAGPH* # PASA_UPDATE: g13884.t1, single gene model update, valid-1, status:[pasa:asmbl_723,status:12], valid-1 NODE_1191_length_13264_cov_41.5066 . gene 51 2469 . + . ID=g13884;Name=g13884.t1 NODE_1191_length_13264_cov_41.5066 . mRNA 51 2469 . + . ID=g13884.t1;Parent=g13884;Name=g13884.t1 NODE_1191_length_13264_cov_41.5066 . five_prime_UTR 51 52 . + . ID=g13884.t1.utr5p1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . exon 51 178 . + . ID=g13884.t1.exon1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . CDS 53 178 . + 0 ID=cds.g13884.t1;Parent=g13884.t1;5_prime_partial=true NODE_1191_length_13264_cov_41.5066 . exon 345 491 . + . ID=g13884.t1.exon2;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . CDS 345 491 . + 0 ID=cds.g13884.t1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . exon 898 1332 . + . ID=g13884.t1.exon3;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . CDS 898 1332 . + 0 ID=cds.g13884.t1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . exon 1520 1646 . + . ID=g13884.t1.exon4;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . CDS 1520 1646 . + 0 ID=cds.g13884.t1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . exon 1785 2469 . + . ID=g13884.t1.exon5;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . CDS 1785 2263 . + 2 ID=cds.g13884.t1;Parent=g13884.t1 NODE_1191_length_13264_cov_41.5066 . three_prime_UTR 2264 2469 . + . ID=g13884.t1.utr3p1;Parent=g13884.t1 #PROT g13884.t1 g13884 VALCTVDGQRFSIGDARTEFCVQSCCKPINYCLALEEHGVDKVHSHVGREPSGRGFNELTLNERGLPHNPLINSGAIMVCGLMREDLDMADRFDYVTKAWQRMAGGARVGFSNSTYLSERQTADRNFCLAYFMRENNGFPPKAAKNLTEVLEFYFQCCSLEMTAEAMSVVAGTLANGGVCPITNERIMSPATVRHCLSMMLSCGMYDYSGEFAFSIGIPAKSGVAGALMIVVPNVMGICTWSPRLDRQGNSVRGVDFCKEFGGRFTFHDFDELVHIGRVNGKRNPTLRANDPKNHNMVAMCFAASQGDISAVKRLLQHGASLDDCDYDGRCPLHLAASEGHVSVVHYFVRHGCPPNPRDRWGGTPLDDAVRGGKDEVVDVLRRYGGLSGSEMGPMSADAGASATSSSQSASPPLGASPGHAGGRVGGLGIGKASPVR* # ORIGINAL: g13886.t1 original gene structure, not modified by PASA NODE_1191_length_13264_cov_41.5066 AUGUSTUS gene 9563 10776 . + . ID=g13886;Name=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS mRNA 9563 10776 . + . ID=g13886.t1;Parent=g13886;Name=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 9563 9732 . + . ID=g13886.t1.exon1;Parent=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 9563 9732 . + 0 ID=cds.g13886.t1;Parent=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 9832 9912 . + . ID=g13886.t1.exon2;Parent=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 9832 9912 . + 1 ID=cds.g13886.t1;Parent=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS exon 10077 10776 . + . ID=g13886.t1.exon3;Parent=g13886.t1 NODE_1191_length_13264_cov_41.5066 AUGUSTUS CDS 10077 10776 . + 1 ID=cds.g13886.t1;Parent=g13886.t1 #PROT g13886.t1 g13886 MMRVFILLCARALPLHRAVKAYSISRESKYLLVQDVPALGATKELLELFALYGDIEEYRLLDEYPSEPFTDVYWIKFKDIRAARIAKRKLDDYSFLGQLLHVTYAPEFESLDDARDKLLDRRRAVSAKLGALSRDSGGDGNGSRGRASGGNPSAIDGVAAVADYATAPATAHALGTGSQGSRSRHSQPPPPNQPPTLARHVTHAPPPPPPPPWPPQHAPQGMLPRHYEAAPPIGATPTPAPTSAMPHNLRLPTTALIYYPYHTPRHTGHTTQPQWRPPVVPVPRVNTAPPVPPAPAPSAAGMGREADDREVKRRRI* # PASA_UPDATE: g13887.t1, single gene model update, valid-1, status:[pasa:asmbl_722,status:12], valid-1 NODE_1191_length_13264_cov_41.5066 . gene 10820 11632 . - . ID=g13887;Name=g13887.t1 NODE_1191_length_13264_cov_41.5066 . mRNA 10820 11632 . - . ID=g13887.t1;Parent=g13887;Name=g13887.t1 NODE_1191_length_13264_cov_41.5066 . five_prime_UTR 11493 11632 . - . ID=g13887.t1.utr5p1;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . exon 11427 11632 . - . ID=g13887.t1.exon1;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . CDS 11427 11492 . - 0 ID=cds.g13887.t1;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . exon 11238 11333 . - . ID=g13887.t1.exon2;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . CDS 11238 11333 . - 0 ID=cds.g13887.t1;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . exon 10820 11085 . - . ID=g13887.t1.exon3;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . CDS 10993 11085 . - 0 ID=cds.g13887.t1;Parent=g13887.t1 NODE_1191_length_13264_cov_41.5066 . three_prime_UTR 10820 10992 . - . ID=g13887.t1.utr3p1;Parent=g13887.t1 #PROT g13887.t1 g13887 MDFSQLSEADQREMMRVLERKQMQDFLKLYNGLTERCFTDCVNDFTSRDVGNKEDACVGMCVEKFIKLSQRIGQRFSEQQQQGK* # PASA_UPDATE: g12240.t1, single gene model update, valid-1, status:[pasa:asmbl_4618,status:3], valid-1 NODE_2599_length_5729_cov_42.7103 . gene 310 4705 . + . ID=g12240;Name=g12240.t1 NODE_2599_length_5729_cov_42.7103 . mRNA 310 4705 . + . ID=g12240.t1;Parent=g12240;Name=g12240.t1 NODE_2599_length_5729_cov_42.7103 . five_prime_UTR 310 378 . + . ID=g12240.t1.utr5p1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . five_prime_UTR 496 505 . + . ID=g12240.t1.utr5p2;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 310 378 . + . ID=g12240.t1.exon1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 496 601 . + . ID=g12240.t1.exon2;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 506 601 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 865 1017 . + . ID=g12240.t1.exon3;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 865 1017 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 1153 1617 . + . ID=g12240.t1.exon4;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 1153 1617 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 1854 1953 . + . ID=g12240.t1.exon5;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 1854 1953 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 2223 2341 . + . ID=g12240.t1.exon6;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 2223 2341 . + 2 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 2681 2788 . + . ID=g12240.t1.exon7;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 2681 2788 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 3014 3067 . + . ID=g12240.t1.exon8;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 3014 3067 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 3308 3434 . + . ID=g12240.t1.exon9;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 3308 3434 . + 0 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 3810 3945 . + . ID=g12240.t1.exon10;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 3810 3945 . + 2 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . exon 4195 4705 . + . ID=g12240.t1.exon11;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . CDS 4195 4420 . + 1 ID=cds.g12240.t1;Parent=g12240.t1 NODE_2599_length_5729_cov_42.7103 . three_prime_UTR 4421 4705 . + . ID=g12240.t1.utr3p1;Parent=g12240.t1 #PROT g12240.t1 g12240 MAKSSTSKQQPAINGAAVGKAAYGNGAPASHKMHEEFEDTPFLIAVITSFQFMCLIIFGHFRDFLRRMKLYEGHLYKKEEAMEEFAPLYADFESFYTRNLYRRIRDCWNRPIGTCPGRRFEVLERKSNDKNFTLYLTGKRLDVINLGSYNYLGFAETNGKCADAAETSIKKYGISACSSRMELGTQKMHRELEKLVADFVGKEDAIVFGMGFATNSTTIPSLVGKGCLIVSDELNHTSLVLGSRLSGARIKVFKHNNMENLERVLRTSIAEGQPKTHRPWKKILIVVEGIYSMEGSVIQLPRLIELKKKYKAYLWLDEAHSIGALGPTGRGVTDYFGIGTEDIDIMMGTFTKSFGAAGGYVAGSKEIMDHMRLSCFGSVYASSMAPAVVQQTITSMRIIMGVDGDVEGQRRIQQLKENTRYFRARLKNMGFIIYGNDDSPIVPLLLFQPHRIAQFSRQCLKRGLGVVVVGFPATPVHESRARFCLSASHTRADLDLALEKIDEVGDYLMLKNSRKYGPGLKTIPVPS* # PASA_UPDATE: g14155.t1, single gene model update, valid-1, status:[pasa:asmbl_1248,status:12], valid-1 NODE_1339_length_11904_cov_52.1937 . gene 3286 6235 . + . ID=g14155;Name=g14155.t1 NODE_1339_length_11904_cov_52.1937 . mRNA 3286 6235 . + . ID=g14155.t1;Parent=g14155;Name=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 3286 3384 . + . ID=g14155.t1.exon1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 3286 3384 . + 0 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 3550 3686 . + . ID=g14155.t1.exon2;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 3550 3686 . + 0 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 4059 4183 . + . ID=g14155.t1.exon3;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 4059 4183 . + 1 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 4341 4937 . + . ID=g14155.t1.exon4;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 4341 4937 . + 2 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 5056 5264 . + . ID=g14155.t1.exon5;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 5056 5264 . + 2 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 5453 5631 . + . ID=g14155.t1.exon6;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 5453 5631 . + 0 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . exon 5756 6235 . + . ID=g14155.t1.exon7;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . CDS 5756 6158 . + 1 ID=cds.g14155.t1;Parent=g14155.t1 NODE_1339_length_11904_cov_52.1937 . three_prime_UTR 6159 6235 . + . ID=g14155.t1.utr3p1;Parent=g14155.t1 #PROT g14155.t1 g14155 MWHEARKQEKAVKTLMVDLQKRAERRRNFYLRKTEDPFQRLRLVGNKCTLHADEQQYLNIESTDSLLRWQGQADNKLDRYDARLGLDYIPDPTEESDTREPDDGGNYERYRLLVNNDVTGATEAAVLSAIDTEEEHALPASLAATAAGADASKAASKNKAAIGFDYGTGEDVQDDDDTGGKNNDDGDERPDTDPIHATTFTAAGADGDARGRQWDETGREYGISDFVKKAIADQNEAKEAARIKAENIRNAMGHRRRGRGAADHHDQRRPSRDGPTDAEIEDNRRAPDYAVRSSPTYEPYSSASRRRSRSSSPPRETKIEFITEFGKPTNESADSEDAGEGSVIGMGVDRERSPVRATARPATARPATAPPPKSVPVVKSEIQKKLTPQERLKRKMQLMLASQQERDMAKAREKEEAAREQRQQREDEIVRRGARQDAPARADVGNRRRDNDPSPSPPRRRSRSRTRSRSPIRRLDADRRRGRSRSRSRDRRRGRSSSRDRRCRSRSASRRRHGSRSRSRGRRRSPSRSVSRERLTMRRRASNSRSRSESRSRSRSRSRSRSRSRSSRSGSRSRRSRSRSRR* # PASA_UPDATE: g14156.t1, single gene model update, valid-1, status:[pasa:asmbl_1249,status:12],[pasa:asmbl_1250,status:12], valid-1 NODE_1339_length_11904_cov_52.1937 . gene 7522 11032 . + . ID=g14156;Name=g14156.t1 NODE_1339_length_11904_cov_52.1937 . mRNA 7522 11032 . + . ID=g14156.t1;Parent=g14156;Name=g14156.t1 NODE_1339_length_11904_cov_52.1937 . exon 7522 7744 . + . ID=g14156.t1.exon1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . CDS 7522 7744 . + 0 ID=cds.g14156.t1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . exon 7931 8266 . + . ID=g14156.t1.exon2;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . CDS 7931 8266 . + 2 ID=cds.g14156.t1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . exon 8496 9226 . + . ID=g14156.t1.exon3;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . CDS 8496 9226 . + 2 ID=cds.g14156.t1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . exon 9451 10161 . + . ID=g14156.t1.exon4;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . CDS 9451 10161 . + 0 ID=cds.g14156.t1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . exon 10504 11032 . + . ID=g14156.t1.exon5;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . CDS 10504 10626 . + 0 ID=cds.g14156.t1;Parent=g14156.t1 NODE_1339_length_11904_cov_52.1937 . three_prime_UTR 10627 11032 . + . ID=g14156.t1.utr3p1;Parent=g14156.t1 #PROT g14156.t1 g14156 MAVNGGGWVPDPHHKTYPPVAYEPYHAGGSAPVNVGGHFDRRPYDGPLPRVGSSFTDQYSDPPIGRVQRDWPIQDIPRNAEFLGPTIARPYGAPVGHAEFSRPFDCDIYRRYSDTPDAMEAHMLPPLDHRRASGPDWVEVAPLRTVSRGAFGRTEFGMSMPPLRTAAPTYPEDPIPWDMVPAGYTDGNWRDDLFQAGHCAWPGCGAFVGAMDDLRVHLQRYHEITPVDDARRELDRQLVHVQGYEAALECERRRLFAMESVLYRALYQGAPASDWDDSSLDDADHMDTDGEEDATGDRQREQVRAEGRTPSQVCVRVSADDSSFGSSGGDGASGAPGSTPAKNSSRGGRRKSSTTSTGSTSDRRAGIIRGREIGPLVTTRDPRVKPPYSYATMIYHAIKSSPDGIMTLGNIYRWLNENFPFFDMNDVPWKNAIRHNLSLHACFKRVEHNKVRAWTVTEEDFRCRKGPRRRKSGESGDAGEMDDFKAEQVSEGAVAAPNTADASSWAAVPKAQKLTIRKGKPPTYSSQAYDAFKKKLEAAAAAAASLALGPEHGSAPAATTTAAATATAADAIRTTDTGAGAESTANAVAPPPACVGDGSTQEPSANPKSAPLAASHAEVDASEGIAPSTPANPRDSAAVGNIQFVPYVQPPLQKDAAAARITAVSTKSPDITTSVTERYEAILKSFEARRKFVRDAERDADIQQSMA* # ORIGINAL: g14154.t1 original gene structure, not modified by PASA NODE_1339_length_11904_cov_52.1937 AUGUSTUS gene 642 2616 . - . ID=g14154;Name=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS mRNA 642 2616 . - . ID=g14154.t1;Parent=g14154;Name=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS exon 1978 2616 . - . ID=g14154.t1.exon1;Parent=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS CDS 1978 2616 . - 0 ID=cds.g14154.t1;Parent=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS exon 1525 1773 . - . ID=g14154.t1.exon2;Parent=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS CDS 1525 1773 . - 0 ID=cds.g14154.t1;Parent=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS exon 642 1277 . - . ID=g14154.t1.exon3;Parent=g14154.t1 NODE_1339_length_11904_cov_52.1937 AUGUSTUS CDS 642 1277 . - 0 ID=cds.g14154.t1;Parent=g14154.t1 #PROT g14154.t1 g14154 MSLIAFACDFLSHGYTHIPAWALILLIGWLAVVVVYRRPMMLIVTLYYLATAGISSWTTKNKSARLQVHVVRSKDLDDITRSELFVLAADLVDVNMDPSERIGERSKDRAIFKLYLEAFEFVLLFRDIVDGSLRGMLLLSRTKYERVGFSPVTVIQGGLLLFREQYRGSGFGVLVMGMFFVLEFLRHPLTPLYFAFKSYSYKTYLNTVTTFEEVWPRYDRSIPEFEKRMIDDAGFCMARGGEVYDPIRCVVNREESALQEKMAPITDVELSDPHIRFFNTVNPDWHKGHLLVVLAKARPADIVNLMWRGVKRAIGLGKGIRRVRGTVVADHENFQVARKRASIAAETAAAAAVAAASTSYAAKYSSMPSPSASTSTSLSASFEKEPWQLGATSASTGQDGAATQPSDAPSASGARRTSLLPFHRIMSKGAALTLAEAKERLSPDLRRRSLSESALRPALLLMLASGARMEGYDFARDSLDTPVETQTPHCMSAADAGSDSDQASGAE* # ORIGINAL: g10856.t1 original gene structure, not modified by PASA NODE_1474_length_11079_cov_42.5695 AUGUSTUS gene 1155 3029 . - . ID=g10856;Name=g10856.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS mRNA 1155 3029 . - . ID=g10856.t1;Parent=g10856;Name=g10856.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 2466 3029 . - . ID=g10856.t1.exon1;Parent=g10856.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 2466 3029 . - 0 ID=cds.g10856.t1;Parent=g10856.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 1155 2273 . - . ID=g10856.t1.exon2;Parent=g10856.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 1155 2273 . - 0 ID=cds.g10856.t1;Parent=g10856.t1 #PROT g10856.t1 g10856 MAAQLSRGVSADDNGIYGSAEATPLDIPATCVLTCDEGDDDDDDVIALNARILMGPIAITRKPAPTTAAFGNRTPPGPCRAPSVGASEGRYRRTLASPATPVRPCLDARGALHTSLIVALLRLACNVKDDVALATVLSAAEWSLQQTLTDGGKVKRVHGCADLLRDLKVFAGEKRLSLWLALVSYSRQVALGTVGHVVSVCSIHGKGYEAPMRLVVKAVDSMVEWMTSPGSKSNNTRNACTVAAQALACAKKILCDTAQAKVLVLASSEYDAAALKAGNYVARFAVDRRAMDAALCALGTLSASTTNSQSGADVHISAAANNTRTMVVRQLIERYASVSRDWMHESVWQSGLDRTKAIMVAAVQSPPPSPSSVMLSGGCARATPYDELRRLRKAGVAVSREIPLARAFAEVAEEGVTAKRAHSDPADRLRELNGVREMRGLPELSRDDEDTENMDPRRCVSQSENGACFNSHFNSGDAKGDSGTMGGASDARVGAGKKRARDGSTAVSGTKDDKGRHASGHLGIASKGGIHPPQKKRKVSMPTVSDGRRQQSIAAFFKVT* # ORIGINAL: g10857.t1 original gene structure, not modified by PASA NODE_1474_length_11079_cov_42.5695 AUGUSTUS gene 6878 8036 . + . ID=g10857;Name=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS mRNA 6878 8036 . + . ID=g10857.t1;Parent=g10857;Name=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 6878 6943 . + . ID=g10857.t1.exon1;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 6878 6943 . + 0 ID=cds.g10857.t1;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 7042 7154 . + . ID=g10857.t1.exon2;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 7042 7154 . + 0 ID=cds.g10857.t1;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 7405 7504 . + . ID=g10857.t1.exon3;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 7405 7504 . + 1 ID=cds.g10857.t1;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 7917 8036 . + . ID=g10857.t1.exon4;Parent=g10857.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 7917 8036 . + 0 ID=cds.g10857.t1;Parent=g10857.t1 #PROT g10857.t1 g10857 MSETEKSEREKKELSKNLMAMKFMQRKHEADLKRQYAEQQQKAIDESHWKVEVAKQEEHSEVAVEVSATDLHVEALTTVGGRRSFGNFNPVVEKLTRQMDHDRRMRKADEFEEQETVGEDEMAHRYKKMRTK* # ORIGINAL: g10855.t1 original gene structure, not modified by PASA NODE_1474_length_11079_cov_42.5695 AUGUSTUS gene 51 621 . + . ID=g10855;Name=g10855.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS mRNA 51 621 . + . ID=g10855.t1;Parent=g10855;Name=g10855.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 51 168 . + . ID=g10855.t1.exon1;Parent=g10855.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 51 168 . + 2 ID=cds.g10855.t1;Parent=g10855.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS exon 462 621 . + . ID=g10855.t1.exon2;Parent=g10855.t1 NODE_1474_length_11079_cov_42.5695 AUGUSTUS CDS 462 621 . + 1 ID=cds.g10855.t1;Parent=g10855.t1 #PROT g10855.t1 g10855 AFDTTVEEDISALKSAVGHVSSELGLPHGLVKDDYIHEMCRFGAAEMHTIAALLGGVASQEVAKLITHQFVPFNNTFLFNGIDGSSASYAL* # ORIGINAL: g10262.t1 original gene structure, not modified by PASA NODE_2937_length_4693_cov_49.9942 AUGUSTUS gene 121 4599 . + . ID=g10262;Name=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS mRNA 121 4599 . + . ID=g10262.t1;Parent=g10262;Name=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 121 345 . + . ID=g10262.t1.exon1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 121 345 . + 1 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 563 682 . + . ID=g10262.t1.exon2;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 563 682 . + 1 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 1043 1236 . + . ID=g10262.t1.exon3;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 1043 1236 . + 1 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 1430 2214 . + . ID=g10262.t1.exon4;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 1430 2214 . + 2 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 2360 2625 . + . ID=g10262.t1.exon5;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 2360 2625 . + 0 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 2998 3142 . + . ID=g10262.t1.exon6;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 2998 3142 . + 1 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 3276 3439 . + . ID=g10262.t1.exon7;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 3276 3439 . + 0 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 3588 3745 . + . ID=g10262.t1.exon8;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 3588 3745 . + 1 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 3955 4088 . + . ID=g10262.t1.exon9;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 3955 4088 . + 2 ID=cds.g10262.t1;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS exon 4585 4599 . + . ID=g10262.t1.exon10;Parent=g10262.t1 NODE_2937_length_4693_cov_49.9942 AUGUSTUS CDS 4585 4599 . + 0 ID=cds.g10262.t1;Parent=g10262.t1 #PROT g10262.t1 g10262 YGWCPSAGPNAYNLPAENRFWFAQSAFTGRSITHLEMYYAALQHPWLADDSGAPRRSFFYLRDSAFMDSAEFNKLKTSEETQRIHEDFQCRPEHMPLMGELKDAISTLPGLPVSKYTCNWRGIVDMKPMVGELDAFADNVIANVWGSVAAMYPKENFDVSAANVNQHDIVRMAHDRRIQELLVHTVERKEATDAVLSYCAKPHDELSPPLMLIGESGSGKSTVMASVVNRLTAEYTGKSRDATKAGDGLWDVPYIHTHFVGAGPESTSVDLLVRRFLRELARECGDADSLASADESQDFRELCGAFNGALLRMSKERRAVYIVVDAVDQLDDLYDASSLDWLPVALPAGVRIVVSTVVGHASQLSGTRLGLPGQPLGLLSEREKKDIVASMLQVQRKSLSAEQLSAIVSKASSGLPLYLKIACSELALYGHYDTFDKASALAISTLPASVPLLLVGVILRWEGDHGPALVKDALCLLVCVRAGLLESEALAILECSPGAWSKFCVDLKTYLRPIKEAGTRGEGRLDLFHRQMAVAIQQRYKDYGTYHQRLAKYFAENLEAEMKRYSVGVFPRAQKELPYHQRMAGMYVEALVVTRVRNFDDQERAANEISIVRMHGNKTIVKNPDTGRDDEFSFHYSFWSHDRKGGNNAPYISQEAVHSILGYDVIQNAFDGVNVCLFAYGQTGSGKTYTMYGTPNDRGLVPRILEELYRRVEASAGKEMTYRMDFMMFESCIL* # PASA_UPDATE: g7745.t1, single gene model update, valid-1, status:[pasa:asmbl_2440,status:3], valid-1 NODE_1719_length_9535_cov_60.4522 . gene 5233 7468 . - . ID=g7745;Name=g7745.t1 NODE_1719_length_9535_cov_60.4522 . mRNA 5233 7468 . - . ID=g7745.t1;Parent=g7745;Name=g7745.t1 NODE_1719_length_9535_cov_60.4522 . five_prime_UTR 7078 7468 . - . ID=g7745.t1.utr5p1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . exon 6647 7468 . - . ID=g7745.t1.exon1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . CDS 6647 7077 . - 0 ID=cds.g7745.t1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . exon 6284 6465 . - . ID=g7745.t1.exon2;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . CDS 6284 6465 . - 1 ID=cds.g7745.t1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . exon 5855 5993 . - . ID=g7745.t1.exon3;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . CDS 5855 5993 . - 2 ID=cds.g7745.t1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . exon 5233 5669 . - . ID=g7745.t1.exon4;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . CDS 5546 5669 . - 1 ID=cds.g7745.t1;Parent=g7745.t1 NODE_1719_length_9535_cov_60.4522 . three_prime_UTR 5233 5545 . - . ID=g7745.t1.utr3p1;Parent=g7745.t1 #PROT g7745.t1 g7745 MASPMGRTVGPWTIGDFVSKGSVVRCATNASGERAAVKVLDKRHLGPTDRELVRHQVKLLRSLRGHDNIINLVDVHETEEELFLVYEHIRQGEELLEYLQSRKRLGEDEARMVFAQIASAVVHLHAKGIAHRDMKLPVLLFDVRRHVVKITDFTFAIQVAPGQLICDQRGSPAYVSPEILSSEPYDPYKADVWAMGVILYALLAGTYPFADADPQRLFARIASGRFDHPANVSREVRSLLTQMLCVDPRARISAAEVLSHPWTRAGYAGLSNDQVVPELSVPFSGDSASCK* # ORIGINAL: g7743.t1 original gene structure, not modified by PASA NODE_1719_length_9535_cov_60.4522 AUGUSTUS gene 351 754 . - . ID=g7743;Name=g7743.t1 NODE_1719_length_9535_cov_60.4522 AUGUSTUS mRNA 351 754 . - . ID=g7743.t1;Parent=g7743;Name=g7743.t1 NODE_1719_length_9535_cov_60.4522 AUGUSTUS exon 351 754 . - . ID=g7743.t1.exon1;Parent=g7743.t1 NODE_1719_length_9535_cov_60.4522 AUGUSTUS CDS 351 754 . - 0 ID=cds.g7743.t1;Parent=g7743.t1 #PROT g7743.t1 g7743 MSEAGGVNQSGSAGEAAGQAQQSQQQAASMPQQQHMYLRPHHRGAVAAKDLECLDVIHPNGGNRATVLGHDKEGNRVHIPNMNYDHAVRLAEQLGGCTQHHSLDVSQEHEYDLRDGHHVAGGAIRGDSGNKSEE # PASA_UPDATE: g7746.t1, single gene model update, valid-1, status:[pasa:asmbl_2438,status:12], valid-1 NODE_1719_length_9535_cov_60.4522 . gene 8095 9428 . - . ID=g7746;Name=g7746.t1 NODE_1719_length_9535_cov_60.4522 . mRNA 8095 9428 . - . ID=g7746.t1;Parent=g7746;Name=g7746.t1 NODE_1719_length_9535_cov_60.4522 . exon 8766 9428 . - . ID=g7746.t1.exon1;Parent=g7746.t1 NODE_1719_length_9535_cov_60.4522 . CDS 8766 9428 . - 0 ID=cds.g7746.t1;Parent=g7746.t1 NODE_1719_length_9535_cov_60.4522 . exon 8095 8500 . - . ID=g7746.t1.exon2;Parent=g7746.t1 NODE_1719_length_9535_cov_60.4522 . CDS 8180 8500 . - 0 ID=cds.g7746.t1;Parent=g7746.t1 NODE_1719_length_9535_cov_60.4522 . three_prime_UTR 8095 8179 . - . ID=g7746.t1.utr3p1;Parent=g7746.t1 #PROT g7746.t1 g7746 MRAYHRLRASSSSSSSRQRSSLIRSGSASLNGSPSHNSFSPSNSCESSPGSHSPLVQDRDGLFFGASLDSLTLGSPVRPSSKRPSQQRQPQTQQQQQQQPRTRIFDQSPLLAKTARQTSPEVRSGGGFMSPGVTPLGASATTSASYTTSPLAMGASGNGLHFAGSGRGNPTSPQSKGGIVMRPSALEGIDPKRVYGRNSVSEPPDRQIRLRESKINGLSLRPQPQPAHAPYDRNTWPTSLSNSTAQSGAFVPGSDHSRSSLVFRVCSSPWLLVVAVSIIANVVMFAAVVFLWQRVMADSGLSSNADAHAAPPPLHVGVQAAPGALPH* # PASA_UPDATE: g7744.t1, single gene model update, valid-1, status:[pasa:asmbl_2439,status:3], valid-1 NODE_1719_length_9535_cov_60.4522 . gene 1680 4810 . - . ID=g7744;Name=g7744.t1 NODE_1719_length_9535_cov_60.4522 . mRNA 1680 4810 . - . ID=g7744.t1;Parent=g7744;Name=g7744.t1 NODE_1719_length_9535_cov_60.4522 . five_prime_UTR 4611 4810 . - . ID=g7744.t1.utr5p1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 4525 4810 . - . ID=g7744.t1.exon1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 4525 4610 . - 0 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 4156 4256 . - . ID=g7744.t1.exon2;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 4156 4256 . - 1 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 3676 3780 . - . ID=g7744.t1.exon3;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 3676 3780 . - 2 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 3295 3376 . - . ID=g7744.t1.exon4;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 3295 3376 . - 2 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 2923 3034 . - . ID=g7744.t1.exon5;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 2923 3034 . - 1 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 2603 2657 . - . ID=g7744.t1.exon6;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 2603 2657 . - 0 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 1998 2241 . - . ID=g7744.t1.exon7;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 1998 2241 . - 2 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . exon 1680 1770 . - . ID=g7744.t1.exon8;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . CDS 1761 1770 . - 1 ID=cds.g7744.t1;Parent=g7744.t1 NODE_1719_length_9535_cov_60.4522 . three_prime_UTR 1680 1760 . - . ID=g7744.t1.utr3p1;Parent=g7744.t1 #PROT g7744.t1 g7744 MSDYESIQLVKNEVFVYKIPPRTTNKGHRAENWDLSNPIWVGRVKVAARGNNLFVKLEDKTTGELFAQTQVDAFPGAVVEQVMDSSRYFVLRIEDGSGRHAFIGLGFSDRGDSFDFQVSLQDHFRWLTTSKEAEQQMEQLRQQGPSVDYSLKEGQTIRISLGKKEGQAAPAAARPRPAPSNSTGAVPFLPPPPGSARVAAPAATAAPLASFPSPNRPTQPQQQQPPQQLQGGLADLDPFGFGSFAAPASNPSGATNNNNNNNWF* # ORIGINAL: g7186.t1 original gene structure, not modified by PASA NODE_4306_length_1844_cov_35.3748 AUGUSTUS gene 492 1795 . + . ID=g7186;Name=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS mRNA 492 1795 . + . ID=g7186.t1;Parent=g7186;Name=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS exon 492 683 . + . ID=g7186.t1.exon1;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS CDS 492 683 . + 0 ID=cds.g7186.t1;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS exon 877 1393 . + . ID=g7186.t1.exon2;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS CDS 877 1393 . + 0 ID=cds.g7186.t1;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS exon 1521 1645 . + . ID=g7186.t1.exon3;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS CDS 1521 1645 . + 2 ID=cds.g7186.t1;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS exon 1736 1795 . + . ID=g7186.t1.exon4;Parent=g7186.t1 NODE_4306_length_1844_cov_35.3748 AUGUSTUS CDS 1736 1795 . + 0 ID=cds.g7186.t1;Parent=g7186.t1 #PROT g7186.t1 g7186 MSPAIMSRFDLFFIVLDECNEVSDYNIARHIVNMHMQKDAAIDPPYSMVDVQRYIRFARTIKPTIPQDSIKLFAECYRNLRQGDSNGGTKSSYRITVRQLESMIRLSEALARLHCDSQVRPKYVLEAYRLLRKSIIHVEMGEVNLDDDFVLGGAAAASVGDVAMPDANNSNNNNNNQDAGNNNKDAAERASQPSQQPAAQGADADRPKTVVTYEKYMRIANMLAMHLRQSEELEESGMRKSALIEWYLNEIQDDIGSEAQLVEERDVCAKVIARLIHKRWFGRTYTRGKHTEDSFHC* # PASA_UPDATE: g3377.t1, single gene model update, valid-1, status:[pasa:asmbl_2517,status:12], valid-1 NODE_1750_length_9396_cov_42.3932 . gene 196 1168 . + . ID=g3377;Name=g3377.t1 NODE_1750_length_9396_cov_42.3932 . mRNA 196 1168 . + . ID=g3377.t1;Parent=g3377;Name=g3377.t1 NODE_1750_length_9396_cov_42.3932 . five_prime_UTR 196 251 . + . ID=g3377.t1.utr5p1;Parent=g3377.t1 NODE_1750_length_9396_cov_42.3932 . exon 196 433 . + . ID=g3377.t1.exon1;Parent=g3377.t1 NODE_1750_length_9396_cov_42.3932 . CDS 252 433 . + 0 ID=cds.g3377.t1;Parent=g3377.t1 NODE_1750_length_9396_cov_42.3932 . exon 557 1168 . + . ID=g3377.t1.exon2;Parent=g3377.t1 NODE_1750_length_9396_cov_42.3932 . CDS 557 908 . + 1 ID=cds.g3377.t1;Parent=g3377.t1 NODE_1750_length_9396_cov_42.3932 . three_prime_UTR 909 1168 . + . ID=g3377.t1.utr3p1;Parent=g3377.t1 #PROT g3377.t1 g3377 MANRPAAFGLDAELAAKMADKYDAQAETEVRAFIKARTGHDVPSGSNNVHTALKDGSILCELANALKPGSAANNKKSTMPFKQMENINKFLEVAKGLGVPVANLFQTVDLFENQNMGQVVLCINALKLVVEGKGKLNSTAHKEIKSDPTAISLQMGTNKGANASGQNFGLQRQIVHK* # ORIGINAL: g3379.t1 original gene structure, not modified by PASA NODE_1750_length_9396_cov_42.3932 AUGUSTUS gene 6790 9261 . + . ID=g3379;Name=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS mRNA 6790 9261 . + . ID=g3379.t1;Parent=g3379;Name=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 6790 7237 . + . ID=g3379.t1.exon1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 6790 7237 . + 0 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 7358 7468 . + . ID=g3379.t1.exon2;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 7358 7468 . + 2 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 7706 7899 . + . ID=g3379.t1.exon3;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 7706 7899 . + 2 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 8050 8126 . + . ID=g3379.t1.exon4;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 8050 8126 . + 0 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 8254 8330 . + . ID=g3379.t1.exon5;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 8254 8330 . + 1 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 8709 8763 . + . ID=g3379.t1.exon6;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 8709 8763 . + 2 ID=cds.g3379.t1;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 8904 9261 . + . ID=g3379.t1.exon7;Parent=g3379.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 8904 9261 . + 1 ID=cds.g3379.t1;Parent=g3379.t1 #PROT g3379.t1 g3379 MATAGPSTSASARSSESVESPRPSAVDRMKKGTAVRQSFFRAVATETPAAASGSPIAGNRAPRLVKLVKLPTDAGFGFVVLGGAEHDLTVSVAKINPDTPASRCGQLNPSDEILEVNGQLVVGASHDEVVDLIRASGSEVTLTVKNNSRGSRRLTDILKSKVDDETSDEYQIKEAAWRKLYHSSVPYTTRKPRENEVDGREYNFIEREEFEKMIEEKKFLEFGTHNGNYYGTMKPPLVFQEKAIAKSQTGKAMPDLGPLPDKWEAAVTEDGRQYFIDHNTHTTSWLDPRLTQKRPSGIDQRTGLPWGWEKVTDTYGTYYVDHINRATSWVHPSELEKAAEEERKAQLEQQNGAAPPKAPAVTAASAPASSSSGAGSSVPRTLAESGKADSAAGLALIAQNALSGSRASLHGPNGILRAKSDSSRPSDDPIVRTHREYLL* # ORIGINAL: g3378.t1 original gene structure, not modified by PASA NODE_1750_length_9396_cov_42.3932 AUGUSTUS gene 1291 5830 . - . ID=g3378;Name=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS mRNA 1291 5830 . - . ID=g3378.t1;Parent=g3378;Name=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 5108 5830 . - . ID=g3378.t1.exon1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 5108 5830 . - 0 ID=cds.g3378.t1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 4269 4896 . - . ID=g3378.t1.exon2;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 4269 4896 . - 0 ID=cds.g3378.t1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 3700 4094 . - . ID=g3378.t1.exon3;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 3700 4094 . - 2 ID=cds.g3378.t1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 2529 3461 . - . ID=g3378.t1.exon4;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 2529 3461 . - 0 ID=cds.g3378.t1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 2214 2363 . - . ID=g3378.t1.exon5;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 2214 2363 . - 0 ID=cds.g3378.t1;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS exon 1291 2061 . - . ID=g3378.t1.exon6;Parent=g3378.t1 NODE_1750_length_9396_cov_42.3932 AUGUSTUS CDS 1291 2061 . - 0 ID=cds.g3378.t1;Parent=g3378.t1 #PROT g3378.t1 g3378 MARAHNDVEAARPQLENEFFSAESDDDDFKGRRHSWTANTTVNVNDGVQSATTIDIPSDRERDPRKNAAQMRSFAHAPAGVTGSPLSSLLGSPVYRFGSGGSNNATEAIQLSEYASGISIMSGLANIGMLGSSNNSNSGKNSPSNGTSGSGVTSRRSVNFNWGDAWPARFEGSGFTTGAPSLASTGVDRSGVGVRGVPTRRVQWSGVARSAVRVASHLMLRGQTEKERRAYCEELHLQNIKSLRLALLFAAILPVFYGLVTSHGGSFPHLYARPFPLAAVEMLFAIHLLLTFGSWYARVMQSALCSTIVLYTVLALAPYSPGGTATGALGIAVPTRCNPSPDFVLKWLCVALSCSVVGLRFAPSVAATWISFGIVEIYVHASMPCLPYEDPMVLACLAAMLLAYAIDRARFADFERCRDIARKQDMLVDSSTNQMKSSRAKTEFLSVVSHELRTPLTSIFGFADLLLESDLSTEQKEYVDMMVEAGQHLLGHINNMLNFSKFASYGDSAGRPELVHPVAFDLGLHLEEIGELFAPKAAEKGLELVVHISSEIRPRVVGDMALLRNVIMNLIDNGIKFTRKGEVVLRAHVVKTVPESQDIVFTISDSGIGIPPHVTAGGFVPFQQADSSHNREFEGAGLGLCICETLLRAMHSSLDIRGVENVGTTASFVLRLGVDDTLFERMPLNHVTEESVGRIADLQVAIIANTKVALALRETLLPWRCTVSIAASPIDPFDGLYGMAPGAQNSIQSSLMNSGAGVSAHQRAVTFDQTDADADGAASGKVILEPGALVDTMLIVDYASIPGSPEDYMRGLAARMRRLHIADCTMVVVLLPMLERGTLQADLRRLGIRRFLIKPVKSKDVRDLLLAAVADTVVSAPSLEVAHSGAPFIILAERDSSNRVLMSKWLQKLRIAHEAVSNGQEVINIVRRRRPLLILMDLQLPVKDGFQTTLEIREFECREGQPCIPIVALTARITLEQMLAAGMNDYLEKPVRMRELVTKVQFWISHGAKSVGTSLSVAGRRMPPPASLGSGGILDVAASVGRDHLQSQQAADTGIRGFLGDLGRKLSSGSDGWRMSLGSDNVRKISATSEGRKAPVGNDATSARKISTSSDGRSRGDGSRMVSSGSMKSTPGVSVTARVPGQIPTAGRDESDMRHCDYCLDLFVPHTNGQIVCPECARLDNLELKLDEIADEAGARVYI* # ORIGINAL: g2254.t1 original gene structure, not modified by PASA NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS gene 1604 4256 . + . ID=g2254;Name=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS mRNA 1604 4256 . + . ID=g2254.t1;Parent=g2254;Name=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 1604 1745 . + . ID=g2254.t1.exon1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 1604 1745 . + 0 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 1951 2049 . + . ID=g2254.t1.exon2;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 1951 2049 . + 2 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 2253 2349 . + . ID=g2254.t1.exon3;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 2253 2349 . + 2 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 2712 2855 . + . ID=g2254.t1.exon4;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 2712 2855 . + 1 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 3245 3420 . + . ID=g2254.t1.exon5;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 3245 3420 . + 1 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 3740 3852 . + . ID=g2254.t1.exon6;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 3740 3852 . + 2 ID=cds.g2254.t1;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS exon 4070 4256 . + . ID=g2254.t1.exon7;Parent=g2254.t1 NODE_3034_length_4479_cov_35.4523_potentialcontaminant AUGUSTUS CDS 4070 4256 . + 0 ID=cds.g2254.t1;Parent=g2254.t1 #PROT g2254.t1 g2254 MASSCAARASTARLLALKHRHLNAFVTLSPETALSAAAADADSRAANGKSRGPVDGMVVAVKDNFCTKGLQTTCASRMLEDFVPPYNATAVDRLLSGGAVILGKTNMDEFGMGSYNMHSHFGACRNPWAPSDASRDAGEWHVSGGSSGGSAAAVASGMCDGALGSDTGGSVRLPASYCGVVGLKPSYGRVSRHGLVAYASSLDVPGVMARTVADVARLLGAVAGHDMNDSTSVRAHVPDYTGSLDGSVHGLRVGIPKEYRLASVETHCAWDEAAEWLRQKGAIVSEVSLPSTKPALAAYYVLASAEASSNLARYDGVEY # PASA_UPDATE: g10513.t1, single gene model update, valid-1, status:[pasa:asmbl_5663,status:3], valid-1 NODE_316_length_27125_cov_39.1004 . gene 6995 11128 . + . ID=g10513;Name=g10513.t1 NODE_316_length_27125_cov_39.1004 . mRNA 6995 11128 . + . ID=g10513.t1;Parent=g10513;Name=g10513.t1 NODE_316_length_27125_cov_39.1004 . five_prime_UTR 6995 7280 . + . ID=g10513.t1.utr5p1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 6995 7324 . + . ID=g10513.t1.exon1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 7281 7324 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 7424 7766 . + . ID=g10513.t1.exon2;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 7424 7766 . + 1 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 8048 8131 . + . ID=g10513.t1.exon3;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 8048 8131 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 8346 8408 . + . ID=g10513.t1.exon4;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 8346 8408 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 8595 8768 . + . ID=g10513.t1.exon5;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 8595 8768 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 9080 9187 . + . ID=g10513.t1.exon6;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 9080 9187 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 9403 9657 . + . ID=g10513.t1.exon7;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 9403 9657 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 9915 10094 . + . ID=g10513.t1.exon8;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 9915 10094 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . exon 10300 11128 . + . ID=g10513.t1.exon9;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . CDS 10300 10824 . + 0 ID=cds.g10513.t1;Parent=g10513.t1 NODE_316_length_27125_cov_39.1004 . three_prime_UTR 10825 11128 . + . ID=g10513.t1.utr3p1;Parent=g10513.t1 #PROT g10513.t1 g10513 MASTDYFREEDENVSPLSNTPTDRFAPIKRSTSPSTMSVLSNVSSMGCHTPVRDIRKRDAEVAGIEEVEDDTVDDDTISISSHVSVGGGKTPKKRPRLIGRLSNIMRSPFASKSRVYTPKGPQRRNSVRSDVNQSWHETVSSDILKNMAPREKNRQQAIHEVVATEELYVNDLTLMSGLMYKVALEGAKLSEAEMQLLFGNMLALRDMHALLLASLCASRNESGIYSGIGAAFVKATATFGPTYTQYLPNIEQAQHLVKSKSEEPLFQMFLEAVRSLPQTNRQEFLHYLDRPRARLARYCMLLSAALKHTDPSHPDHALLSDAIASIDNVVKEADRATGAAKVERLKAMLKFEKAEERDRCLEILAQSTQLEMECGFTLVKLSGRKINQEVTAYLFNGCMIVVLHKKAEKTLQLFGEPMRLENIVVREDEDECIRVGRASSVRGRFDDRRDSIAPDALAQMLYVRHVTLPGKETVYALRAPSDRVKREWLSCVSKLQTGRSAYSTDARLSMGGGGSGGGSLSAASGASVLRSITRSQTMSVLPDDSSARFPATTPAKVDVAPVAAAIAAAEVDEFIPMMDFEFGELKECTV* # PASA_UPDATE: g10515.t1, single gene model update, valid-1, status:[pasa:asmbl_5662,status:12],[pasa:asmbl_5664,status:12], valid-1 NODE_316_length_27125_cov_39.1004 . gene 19673 21168 . + . ID=g10515;Name=g10515.t1 NODE_316_length_27125_cov_39.1004 . mRNA 19673 21168 . + . ID=g10515.t1;Parent=g10515;Name=g10515.t1 NODE_316_length_27125_cov_39.1004 . five_prime_UTR 19673 19991 . + . ID=g10515.t1.utr5p1;Parent=g10515.t1 NODE_316_length_27125_cov_39.1004 . exon 19673 20535 . + . ID=g10515.t1.exon1;Parent=g10515.t1 NODE_316_length_27125_cov_39.1004 . CDS 19992 20535 . + 0 ID=cds.g10515.t1;Parent=g10515.t1 NODE_316_length_27125_cov_39.1004 . exon 20674 21168 . + . ID=g10515.t1.exon2;Parent=g10515.t1 NODE_316_length_27125_cov_39.1004 . CDS 20674 20942 . + 2 ID=cds.g10515.t1;Parent=g10515.t1 NODE_316_length_27125_cov_39.1004 . three_prime_UTR 20943 21168 . + . ID=g10515.t1.utr3p1;Parent=g10515.t1 #PROT g10515.t1 g10515 MANSQDSQSLPSRIVCAFHPQESGPCIFRCTNQYQLRETIISIAIHSFPDAHITDLMTRDIAEDECICMHCAKILKRSSASQHGHLHFPPNQRCPHCPKVYRQPAACLRHMRKKHHSTNSNNSNNSNNSNNSNNSNNNSADTIPRVNLGQPTIRHRRATAYTTRGRNMGATLPSAECDALAELGAFAAANGALFQFNVRALHSGTPVGAFAISSTPNAGDAEDDFLLDPLATLVELPELSELSELLELQEDNFFNFDTFENLHTQLKTEE* # ORIGINAL: g10516.t1 original gene structure, not modified by PASA NODE_316_length_27125_cov_39.1004 AUGUSTUS gene 21357 23461 . - . ID=g10516;Name=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS mRNA 21357 23461 . - . ID=g10516.t1;Parent=g10516;Name=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 23128 23461 . - . ID=g10516.t1.exon1;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 23128 23461 . - 0 ID=cds.g10516.t1;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 22858 22973 . - . ID=g10516.t1.exon2;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 22858 22973 . - 2 ID=cds.g10516.t1;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 22158 22475 . - . ID=g10516.t1.exon3;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 22158 22475 . - 0 ID=cds.g10516.t1;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 21357 21950 . - . ID=g10516.t1.exon4;Parent=g10516.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 21357 21950 . - 0 ID=cds.g10516.t1;Parent=g10516.t1 #PROT g10516.t1 g10516 MAATVATTAGAPHRHHLTHIAHSQSSPGASPDGTYAPAKIFDFPTLSTNFGRCAISAEQSMIAPSHGMDAKTFLGTQTLGSLIYWKHPLCDIDANAHVDTALQRLQTNNLLSLPVFNVDKNEYVGLITVLDTMVFLAARYFDDNGHLVSAEDRKGLSSTEIGELVGTSDYFRGGGVWQENGLVILEPTSSLLSALTTMCLGVQRVLVRTTATGHREGMSATIHEDRTTDHRIVSQADVVKHLCEHNVFFLDAFAKTLQELGLDKPTQGRRVVSVVPQTSALEAFRTMFEENADAVAVVDVDGRLLSTLSASDLRGLRVGALADMTRPVGDFLARRHGGRMSPAVALRPDSTLLSAAVGAMICHVHRMWIVDEEKRPISMVRLVDVIKSVHAECVLKKTSTPTSDDGHSVVGVEVASVDAGGEVTAKDGGDAVPAVSAPAASTAGGAVSIRREE* # PASA_UPDATE: g10514.t1, single gene model update, valid-1, status:[pasa:asmbl_5666,status:12], valid-1 NODE_316_length_27125_cov_39.1004 . gene 11359 18585 . - . ID=g10514;Name=g10514.t1 NODE_316_length_27125_cov_39.1004 . mRNA 11359 18585 . - . ID=g10514.t1;Parent=g10514;Name=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 18477 18585 . - . ID=g10514.t1.exon1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 18477 18585 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 18045 18121 . - . ID=g10514.t1.exon2;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 18045 18121 . - 2 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 17458 17591 . - . ID=g10514.t1.exon3;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 17458 17591 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 16925 17159 . - . ID=g10514.t1.exon4;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 16925 17159 . - 1 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 16416 16592 . - . ID=g10514.t1.exon5;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 16416 16592 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 16123 16267 . - . ID=g10514.t1.exon6;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 16123 16267 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 13769 15906 . - . ID=g10514.t1.exon7;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 13769 15906 . - 2 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 13456 13565 . - . ID=g10514.t1.exon8;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 13456 13565 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 13001 13108 . - . ID=g10514.t1.exon9;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 13001 13108 . - 1 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 12610 12736 . - . ID=g10514.t1.exon10;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 12610 12736 . - 1 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 12286 12410 . - . ID=g10514.t1.exon11;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 12286 12410 . - 0 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . exon 11359 12058 . - . ID=g10514.t1.exon12;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . CDS 11806 12058 . - 1 ID=cds.g10514.t1;Parent=g10514.t1 NODE_316_length_27125_cov_39.1004 . three_prime_UTR 11359 11805 . - . ID=g10514.t1.utr3p1;Parent=g10514.t1 #PROT g10514.t1 g10514 MGHLVELEMENFKSYKGKQTIGPFKSFTAVVGPNGAGKSNLMDAISFVLGVRTNHLRSNQLKDLINGANVGNGARRAHVALRFVDDAGVEHHFMRTILHSTSSSEYRHNGKVVTGEEYTEVLKTHNILVKARNFLVFQGDVESIAQKSPKELAMLIENISGSDALREEYERLKQEKEKAGLSLSLAAENTRFNFQKRKDISAEKKQYRQQKDEAERFTKLQGDVALTKAQHMLWQMYHIDKDLNARASEVSTRNAEAEKLKERRAVVEQNLERARVEQATLVKNVASIEKKIAEKDKELSKSRPKHIALQEQGEHVAKRIESMKVQLLKAEQDHKRHAAEMKELENEIAAVANAERAYEQSVAAESQGQDMRLAESQMAEYRALKERVAAETASDTASLEAHRRRQTTEREGMERCRERMAEVDVKLKQHAETRKQFEERRAKLSQYADASQEQVGKLRQELDALLKTQQRAAKRQAELTQELEDTQMKLREAKAAKAESERDKKMSGCVESLKRLFPGVHGKVSDLCRPTHRRYNVAVTVVLGRSMDAIVVDTERAALDCIRYMKEQHIGVATFLPLDTIKVKPTNERYRELGGSTKLVIDVIQHEASMRKVLQYACGNAIVCDTTAEARQLCFGGKDRYKAVTLDGTLIHKSGLMTGGLSGIEGRAQRWDEQEVATLKQRRDDCSKELTEIGRQRRKEVDEQQLQSQINGLEGRLKTTRTDLQVTVERVAGIDAEVRALQDELAKTKPVHDTHAAELRKIEAEMAKISGRRNKVEDELFADFCRAAGIVNIREYEERDLRVAQERAKKRNEFQSQQSRLRNQLEYEKTRDTMEKVAQIRTQLKSDADSLKNLTAEERAHQLQIEKDSAELATRRKQLEEVRKELDAKEEKVKEYKRGITARAKELSSVQSQISLCDTEIEQLRARRHGILKTCKVEEIAIPLVSGSLDEVAENVDDLHSQAATGDGPQPMDLDSLGTEVAPRIYKRESNIKPDYDTLEREIRKADSEEEILSIHQQFVDRIKSMITEMDRIAPNMRAIERLDDVKNRLKETEVEIAVVRKAAEDANSRFNTVREQRHELFMSAFNHISREIDRIYKDLTKSPVQPLGGTAYLNLENSEEPYLHGVIYNAMPPLKRFRDIELLSGGEKTVAALALLFAIHSFQPSPFFVLDEVDAALDNANVNRVANYIRARSGSDFQAIVISLKDTLFEKADGLIGIYRDQKEDSSHTLTMDLTQYADEAPQK* # ORIGINAL: g10512.t1 original gene structure, not modified by PASA NODE_316_length_27125_cov_39.1004 AUGUSTUS gene 433 6344 . - . ID=g10512;Name=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS mRNA 433 6344 . - . ID=g10512.t1;Parent=g10512;Name=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 6296 6344 . - . ID=g10512.t1.exon1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 6296 6344 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 5938 6041 . - . ID=g10512.t1.exon2;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 5938 6041 . - 2 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 5660 5773 . - . ID=g10512.t1.exon3;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 5660 5773 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 5432 5530 . - . ID=g10512.t1.exon4;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 5432 5530 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 5187 5248 . - . ID=g10512.t1.exon5;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 5187 5248 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 4734 4877 . - . ID=g10512.t1.exon6;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 4734 4877 . - 1 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 4484 4563 . - . ID=g10512.t1.exon7;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 4484 4563 . - 1 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 4274 4383 . - . ID=g10512.t1.exon8;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 4274 4383 . - 2 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 2912 4114 . - . ID=g10512.t1.exon9;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 2912 4114 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 2651 2761 . - . ID=g10512.t1.exon10;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 2651 2761 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 2306 2473 . - . ID=g10512.t1.exon11;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 2306 2473 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 1838 1975 . - . ID=g10512.t1.exon12;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 1838 1975 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 1480 1566 . - . ID=g10512.t1.exon13;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 1480 1566 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 1099 1233 . - . ID=g10512.t1.exon14;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 1099 1233 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 819 893 . - . ID=g10512.t1.exon15;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 819 893 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 433 594 . - . ID=g10512.t1.exon16;Parent=g10512.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 433 594 . - 0 ID=cds.g10512.t1;Parent=g10512.t1 #PROT g10512.t1 g10512 MVLNWCQQETRFHRMLSLRRSTSLNSNAGGTAGVRTFFANNVERNTALNFLKNRVTTTKYNILTFLPKNLFQQFTRIANLYFLILLFIQLIPEVTSQSPATTAVPLLLVLSITAVKDGVDDYKRYKSDLTVNKRKTEIMRNGNWEDERWDAIAVGDMVRVENNQPVPADIIVLATNDPECQCFIETCELDGETNLKVRRAIKPTMRMTDPSQFARLEAEFETEEPNMNLHRFVGKVTEFSGDVTPIDNDNLILRGCVMRNSKWIIGIVVFAGHDTKLMMNSSSPRFKRTKVDKAMNVLIASIFGLLIALCVLSAILASVWENSVGVDFVDYLPYYGTYNTPGKVSMVQFVTFIVLLNTLVPISLYVSLEFIRIGQSLLINWDVLMYDEHSDTPTHCRTTTLSEELGMIQYVFSDKTGTLTRNVMTFVKCTIGGIMYDGSNETTAEAAAARVAAEVAAEAAEQSGEMVGAGGEIFRDKELLSAVKGSNPKAAEFFRLLSLCHTALPDADPKTGKVVYHAQSPDEGALVTAAREFGFEFKGTGAGKMTIVDRGQTIVYELLHIIEFDSDRKRMSVILRDPSGKYLLLTKGADSVIYERLASKDDELQRITGVHLSAFATDGLRTLVLASRVIPDAEYTAWDAEYRTALVSMDERERKVKEVGAKIEHSLVLLGASAVEDKLQAGVPETIANLAKANIKIWMLTGDKQETAINIGYACRLLTNDMDLLIINATTKDQTLQQIRAYLERVALVKETRACIIDGPSLVHGLNEDVKAEFIRLATQCSAVIACRVTPLQKALLVELVKKSQDVVTLAIGDGANDVGMIQAAHIGIGISGQEGRQAVLASDFSFAQFRYPPTHSSHALCCHPCACYFFYKNFAMTLCQFWFSFFSGHSGSSIYDTFFLTFYNVFFSSLPIIILGIFDKDLSDQVALRHPGLYVVGQKQMLFNFK # ORIGINAL: g10517.t1 original gene structure, not modified by PASA NODE_316_length_27125_cov_39.1004 AUGUSTUS gene 24224 26875 . - . ID=g10517;Name=g10517.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS mRNA 24224 26875 . - . ID=g10517.t1;Parent=g10517;Name=g10517.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 25280 26875 . - . ID=g10517.t1.exon1;Parent=g10517.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 25280 26875 . - 0 ID=cds.g10517.t1;Parent=g10517.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS exon 24224 24961 . - . ID=g10517.t1.exon2;Parent=g10517.t1 NODE_316_length_27125_cov_39.1004 AUGUSTUS CDS 24224 24961 . - 0 ID=cds.g10517.t1;Parent=g10517.t1 #PROT g10517.t1 g10517 MRCDSVLSKLDSPLAYPPPPLGYYDAQTIPEIAHSRSNDSSNADTAPTVKLGPAIPELANPTTLASSHVGVLDPSYTPTVTGLVDQGMCVRALQGIKDACDALLAPEATQQKLLEAASMIAKHTTGLCNACKAARTQVTDPATQEQLGNYAKSVATTTKALVPDIKSLVKSLTDADRDKCATKSKPLIEAVQSLVAYVSSTTFTTLTDDALSPAAAGLGDDSTVTSSEQSVVADNKAITKEEHSIEMAPVISAAPAQQTQEMASVPFDSDAAQREITTSDLALSNLEAMASDALRTAMDTATAMERMIALLRQEAAEARRATDSQLDVLALKLHQHCEERLTKLNRANDTQVAELAAQLKRLEARAKFAPSAELTREIEDLRQRQAVLEDDYNARRAAIAKLRHIEGNERLFRFYRSVVIKLQEFFLSCKALDSGMIARDAVTTRDRIAQGIELAGDWIPFPGASTVASIISKVVSLSSDAREAQRAANVADMVLTFREMDEVAEDVGCELTRRYEEQILALKKDGAQDLGECAVKYMVAYVSFADLSNQRVADLLVDAVTSVRLRNGAMSVAGINISKFTHKPIAAERAIDWTDEGIFIRTGIRTHDGRFFGGSGGKDDTARPDKYGYRLGEADKATRLGLRETKGRVESIEVKAVATGVLSKATRQVVKDVVAGGAEAKGRIELLEKQLERLYNERAMASSPPPMQIATLGELQDEIARRFKAVDGTKAYIQLASEFQKIHDAYGPLVSLSLLKKKGIPANVDEAVAEVMEHYLK* # PASA_UPDATE: g6600.t1, single gene model update, valid-1, status:[pasa:asmbl_4962,status:3], valid-1 NODE_2765_length_5180_cov_38.9071 . gene 1089 2749 . + . ID=g6600;Name=g6600.t1 NODE_2765_length_5180_cov_38.9071 . mRNA 1089 2749 . + . ID=g6600.t1;Parent=g6600;Name=g6600.t1 NODE_2765_length_5180_cov_38.9071 . five_prime_UTR 1089 1200 . + . ID=g6600.t1.utr5p1;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . exon 1089 1327 . + . ID=g6600.t1.exon1;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . CDS 1201 1327 . + 0 ID=cds.g6600.t1;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . exon 1849 1996 . + . ID=g6600.t1.exon2;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . CDS 1849 1996 . + 2 ID=cds.g6600.t1;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . exon 2577 2749 . + . ID=g6600.t1.exon3;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . CDS 2577 2619 . + 1 ID=cds.g6600.t1;Parent=g6600.t1 NODE_2765_length_5180_cov_38.9071 . three_prime_UTR 2620 2749 . + . ID=g6600.t1.utr3p1;Parent=g6600.t1 #PROT g6600.t1 g6600 MAAEDANDTDLALAAEADFTKEEEAEKSEIIERILNLQSTMEQLTKRVGTVKGENAKLQSENKVLTQYLENLLAQSSLFTNLSGAPPPQRPSRSNSVGAKAQVKR* # ORIGINAL: g6601.t1 original gene structure, not modified by PASA NODE_2765_length_5180_cov_38.9071 AUGUSTUS gene 3010 4830 . - . ID=g6601;Name=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS mRNA 3010 4830 . - . ID=g6601.t1;Parent=g6601;Name=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS exon 4713 4830 . - . ID=g6601.t1.exon1;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS CDS 4713 4830 . - 0 ID=cds.g6601.t1;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS exon 4106 4180 . - . ID=g6601.t1.exon2;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS CDS 4106 4180 . - 2 ID=cds.g6601.t1;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS exon 3567 3655 . - . ID=g6601.t1.exon3;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS CDS 3567 3655 . - 2 ID=cds.g6601.t1;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS exon 3010 3264 . - . ID=g6601.t1.exon4;Parent=g6601.t1 NODE_2765_length_5180_cov_38.9071 AUGUSTUS CDS 3010 3264 . - 0 ID=cds.g6601.t1;Parent=g6601.t1 #PROT g6601.t1 g6601 MHPPTGRGLDIPVVQVVLNYDVPHNSKDYVHRVGRTARAGRGGRALTLVTQYDIELVQNIEEKIGAQLVEYPVEEEKVLTLLNTVSDSRREAYMHLAETDFGEKKRRNALKRRIMDGDDGDDNKARGRRVSGGIRGVRAHTPGSGSSAKAAGRRAAVDGSGDGKGQKGHVKKMRKPLG* # ORIGINAL: g2725.t1 original gene structure, not modified by PASA NODE_4489_length_1548_cov_178.604_potentialcontaminant AUGUSTUS gene 60 169 . - . ID=g2725;Name=g2725.t1 NODE_4489_length_1548_cov_178.604_potentialcontaminant AUGUSTUS mRNA 60 169 . - . ID=g2725.t1;Parent=g2725;Name=g2725.t1 NODE_4489_length_1548_cov_178.604_potentialcontaminant AUGUSTUS exon 60 169 . - . ID=g2725.t1.exon1;Parent=g2725.t1 NODE_4489_length_1548_cov_178.604_potentialcontaminant AUGUSTUS CDS 60 169 . - 0 ID=cds.g2725.t1;Parent=g2725.t1 #PROT g2725.t1 g2725 MKYLILSVALAVAIAASAVSGAPASTKVIPNASTRG # ORIGINAL: g2712.t1 original gene structure, not modified by PASA NODE_5047_length_1054_cov_28.1931_potentialcontaminant AUGUSTUS gene 2 421 . + . ID=g2712;Name=g2712.t1 NODE_5047_length_1054_cov_28.1931_potentialcontaminant AUGUSTUS mRNA 2 421 . + . ID=g2712.t1;Parent=g2712;Name=g2712.t1 NODE_5047_length_1054_cov_28.1931_potentialcontaminant AUGUSTUS exon 2 421 . + . ID=g2712.t1.exon1;Parent=g2712.t1 NODE_5047_length_1054_cov_28.1931_potentialcontaminant AUGUSTUS CDS 2 421 . + 0 ID=cds.g2712.t1;Parent=g2712.t1 #PROT g2712.t1 g2712 LKKRILNSVTLRVYEDVNNVPSVPVSTVLYLNLPLPSDVQQAIFVPPATNNSKSKPSAKTLIEIPTTNEELADHMVMLMGNLNQTMSENQRLQSANTFLREQLNIRIGKGGKDVKMSKSAKSGKSDKSTKAAKGVCSVM* # ORIGINAL: g14446.t1 original gene structure, not modified by PASA NODE_467_length_23204_cov_41.4345 AUGUSTUS gene 14979 18181 . - . ID=g14446;Name=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS mRNA 14979 18181 . - . ID=g14446.t1;Parent=g14446;Name=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 18056 18181 . - . ID=g14446.t1.exon1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 18056 18181 . - 0 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 17744 17900 . - . ID=g14446.t1.exon2;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 17744 17900 . - 0 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 17200 17378 . - . ID=g14446.t1.exon3;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 17200 17378 . - 2 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 16734 16972 . - . ID=g14446.t1.exon4;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 16734 16972 . - 0 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 16360 16503 . - . ID=g14446.t1.exon5;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 16360 16503 . - 1 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 16044 16124 . - . ID=g14446.t1.exon6;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 16044 16124 . - 1 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 15684 15922 . - . ID=g14446.t1.exon7;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 15684 15922 . - 1 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 15279 15411 . - . ID=g14446.t1.exon8;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 15279 15411 . - 2 ID=cds.g14446.t1;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 14979 15078 . - . ID=g14446.t1.exon9;Parent=g14446.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 14979 15078 . - 1 ID=cds.g14446.t1;Parent=g14446.t1 #PROT g14446.t1 g14446 MSAGTATVCLDRVYQGPMAHSRGAGDIEIIDDAVLGVGTDGKILFFGQAANLPDYLDTHGPDFSAVTHLPSMQIMIPGFIDTHCHAPQYPNAGIGLDLPLLGWLQKYTFPTEARFADLEFARKMYPDVVSRTLRNGTTTCCYFATTHLEACLALADIARTAGQRALIGKVCMDRNSPDFYIETTRESVEGTVALIEKLRASGDAHPLVTPIVTPRFVPTCSEALMAELGQIVKNYDVPVQTHLDENKEEVAWVASLHPNDANYAAVYDRFGLLTNRTVLAHGVHITDDECALIRERQSGIAHCPNSNFSLGSGVCNVRRLQKAQVKVSLGTDMSGGYHPSILDAARNALVASTVVHMLDAQWQRFEFRDLFHLGTLGGAEVLGMDSTIGNFVPGKFLDALIVDPLADDSPFDVYDSQELADVLQKFMFLGDDRNVDTVIVAGKVVHRSRSSLARQALAAKCGLSE* # ORIGINAL: g14443.t1 original gene structure, not modified by PASA NODE_467_length_23204_cov_41.4345 AUGUSTUS gene 166 6472 . - . ID=g14443;Name=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS mRNA 166 6472 . - . ID=g14443.t1;Parent=g14443;Name=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 5777 6472 . - . ID=g14443.t1.exon1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 5777 6472 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 4848 5669 . - . ID=g14443.t1.exon2;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 4848 5669 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 4260 4640 . - . ID=g14443.t1.exon3;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 4260 4640 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 4022 4124 . - . ID=g14443.t1.exon4;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 4022 4124 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 3832 3891 . - . ID=g14443.t1.exon5;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 3832 3891 . - 2 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 3581 3656 . - . ID=g14443.t1.exon6;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 3581 3656 . - 2 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 3250 3385 . - . ID=g14443.t1.exon7;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 3250 3385 . - 1 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 2833 2969 . - . ID=g14443.t1.exon8;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 2833 2969 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 2511 2613 . - . ID=g14443.t1.exon9;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 2511 2613 . - 1 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 1641 2147 . - . ID=g14443.t1.exon10;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 1641 2147 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 1411 1506 . - . ID=g14443.t1.exon11;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 1411 1506 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 1104 1196 . - . ID=g14443.t1.exon12;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 1104 1196 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 812 930 . - . ID=g14443.t1.exon13;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 812 930 . - 0 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 439 506 . - . ID=g14443.t1.exon14;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 439 506 . - 1 ID=cds.g14443.t1;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 166 280 . - . ID=g14443.t1.exon15;Parent=g14443.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 166 280 . - 2 ID=cds.g14443.t1;Parent=g14443.t1 #PROT g14443.t1 g14443 MTASFVPETPLGIRTRIPETPHALLTRRDDGANGDAERDFLTFDLSPEFPCLRMHPGERLASRMTTDSVDAAITLGKVMRTTTTERHLDFAGVGSGAAGSVHVEPDVLTAAGDAGSGSEDSPILLDGMASHVHPVPQYGGLIGERCAGAGRKLVRAAVLAAGSDVLSHARTAEHVAGVQSGKLKRLRRMMSGDSCASGDSAGDSHDSGDGAVSVRVAADAGDVVMIGTQSDRDNAVDGVRRAAMARAPRTGLERPRPASADDIYTYRRRRHSDTWTAEETDSDDGPAAAAFETKRRQLIRVGGSDSDEEEELRSAPRRRLRRVTTMMASSASSMSGSESPVDTLGDHDDEIADEIFRAAGGRLDFASARQKTRVPRGVPPRPASAPAATARRVSRRIDCEGPDILGMCDEDEDDADEDADGDCSDDSDYAGGCGGVADAGHKDDGFDDGGFSDGAWDAGDTGDVRVGVLSFFNEAHEKEIARLQGSNAKKAALVVAMRPFADMDDLTTRLQAAKGLGARLVDVYVDTLGKISALKRLIGECTAIARRLHRSCTSLRRHITSSATADSAPGIDADGSNQADATSAFDAAALAARCPALATAAGEGLLKPYQLEGIEWLLTLRKEKVNGILADEMGLGKTVQTACFLEIVCTQYGDSGPHLIVVPSSTRENWERELAKWCPSLEVMVYAGSAAERNRIQSHILHSRVKPNIILTTYNIAVSTKDDRKFLKRRRWKYVIYDEGHMLKNMASQRYGKLVQISGNRRLLLTGTPLQNNLCELISVLNFVQPRLFYRSAGMLAALLGGNRYSGEDGVGGLAERECVEKARRIMRPFVLRRLKCNVLQQLPPKIDHTDRLEMLPAQRDIYRSIVDGAKAKIASSLENLPSHLRSTEGVAVVGEAGVKCEEAAAVCGAAGSLGCSDSDAQRASTGSLIAAQNNSAHREGPFGDVAFAVEDAAHGASGIPLPTASVPVTSLVGAIMQLRKAANHPCLLRNSYDDATVERIADILSKEREYEETVREHIVEDLAYMTDFEIHSLCARFSSLHTYVLPIRFIMASTKVRWLERELPAMNRSGDRVLIFSQFTSMLDILECVMLHLGHKYLRLDGQTPVAERQTMIDEFNGDPDIFVFLLSTKAGGLGINLTAANVVVLHDIDFNPYNDKQAEDRCHRMGQP # ORIGINAL: g14448.t1 original gene structure, not modified by PASA NODE_467_length_23204_cov_41.4345 AUGUSTUS gene 22408 23027 . - . ID=g14448;Name=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS mRNA 22408 23027 . - . ID=g14448.t1;Parent=g14448;Name=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 23010 23027 . - . ID=g14448.t1.exon1;Parent=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 23010 23027 . - 0 ID=cds.g14448.t1;Parent=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 22817 22891 . - . ID=g14448.t1.exon2;Parent=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 22817 22891 . - 0 ID=cds.g14448.t1;Parent=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 22408 22683 . - . ID=g14448.t1.exon3;Parent=g14448.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 22408 22683 . - 0 ID=cds.g14448.t1;Parent=g14448.t1 #PROT g14448.t1 g14448 MCTKNLTHAAALEGSFALERRKLLGEIQYLRDKVASLEGAFMHSHSRRTSHVTQVAQSQSLPESAPVATMQTPRTSHGPASLDGVSVRMSASDGGAREAHHAHHAHYAHRSTDTLFPPSSLA* # ORIGINAL: g14447.t1 original gene structure, not modified by PASA NODE_467_length_23204_cov_41.4345 AUGUSTUS gene 18812 21777 . + . ID=g14447;Name=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS mRNA 18812 21777 . + . ID=g14447.t1;Parent=g14447;Name=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 18812 18869 . + . ID=g14447.t1.exon1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 18812 18869 . + 0 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 19082 19164 . + . ID=g14447.t1.exon2;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 19082 19164 . + 2 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 19415 19541 . + . ID=g14447.t1.exon3;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 19415 19541 . + 0 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 19625 19698 . + . ID=g14447.t1.exon4;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 19625 19698 . + 2 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 19966 20157 . + . ID=g14447.t1.exon5;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 19966 20157 . + 0 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 20636 20817 . + . ID=g14447.t1.exon6;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 20636 20817 . + 0 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 20995 21214 . + . ID=g14447.t1.exon7;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 20995 21214 . + 1 ID=cds.g14447.t1;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS exon 21316 21777 . + . ID=g14447.t1.exon8;Parent=g14447.t1 NODE_467_length_23204_cov_41.4345 AUGUSTUS CDS 21316 21777 . + 0 ID=cds.g14447.t1;Parent=g14447.t1 #PROT g14447.t1 g14447 MLSQLFVLSARGDTIVHRDYRSDVPRSSTEIFFKKIQAMKGNAPPAFNVDDVQYVHIKRNALYFVATSKFNVSPTFVVEFLQRVSSIIKDYCGVLNEESMRTNFVLVYELLDELLDFGYVQTASTDQLKAFVYNEPIVVDDGNASGGLLGFGRSDRTTVPTSAANKPVASKQRSGKNEVFVDLIERITLLVGPNGATVRCDVDGSLTMKSFLAGTPELRLGFNHDLVIGRAAASARGYSSESYGAVVLDDCTFHSTVDLSHFESERALSITPPEGEFTVMSYRMSGSGVVLPFKLSTFMEPVGANRLDIVVKLRCEMPAGAGAPVAVRIPTPKSALSVSTELIAGGGQTVEVKDVASGALGASGASGASGALPARDGVKTVVWNVRRAVGGGEYALRIKLGVADAASPSVRRDIGPISIEFNAPMYLASGLSIRFLRVIDRGRSYVPYRWVRYLTASDSYVWRIV* # PASA_UPDATE: g14444.t1, single gene model update, valid-1, status:[pasa:asmbl_7523,status:3], valid-1 NODE_467_length_23204_cov_41.4345 . gene 6817 8693 . - . ID=g14444;Name=g14444.t1 NODE_467_length_23204_cov_41.4345 . mRNA 6817 8693 . - . ID=g14444.t1;Parent=g14444;Name=g14444.t1 NODE_467_length_23204_cov_41.4345 . five_prime_UTR 8622 8693 . - . ID=g14444.t1.utr5p1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . exon 8619 8693 . - . ID=g14444.t1.exon1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . CDS 8619 8621 . - 0 ID=cds.g14444.t1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . exon 8128 8538 . - . ID=g14444.t1.exon2;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . CDS 8128 8538 . - 0 ID=cds.g14444.t1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . exon 7858 7970 . - . ID=g14444.t1.exon3;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . CDS 7858 7970 . - 0 ID=cds.g14444.t1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . exon 6817 7675 . - . ID=g14444.t1.exon4;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . CDS 7048 7675 . - 1 ID=cds.g14444.t1;Parent=g14444.t1 NODE_467_length_23204_cov_41.4345 . three_prime_UTR 6817 7047 . - . ID=g14444.t1.utr3p1;Parent=g14444.t1 #PROT g14444.t1 g14444 MTSYDNKGPKPETGRFVNFDHVRFWVGNAKQAATYYCTRFGFEPLGYRGLETGDREVVSHVIRKNNVTFVFESALNPGNKEMGDHLVTHGDGVKDVAFGCENARGIYEFAIANGARSVRAPWEETDENGTVVMATIQSYGDTTHTLVDRTSWKGDNTVFLPRYRKSSTPDPLLAGLPDTHLGFVDHCVGNQPDLAMVPVCEWYEKTLQFHRFWSVDDTQMHTDYSALRSIVMTDYDEVIKMPINEPAPGKRKSQIQEYVEYYGGAGVQHIAINVPDILAAVQNLRARGVEFLTIPTKYYDNLRARLRTASIKVKESLDVIQDLHILVDYDEGGYLLQIFTKPLEDRPTLFIEIIQRFNHQGFGAGNFKALFESIEIEQERRGNL* # PASA_UPDATE: g14445.t1, single gene model update, valid-1, status:[pasa:asmbl_7520,status:3], valid-1 NODE_467_length_23204_cov_41.4345 . gene 9379 14165 . + . ID=g14445;Name=g14445.t1 NODE_467_length_23204_cov_41.4345 . mRNA 9379 14165 . + . ID=g14445.t1;Parent=g14445;Name=g14445.t1 NODE_467_length_23204_cov_41.4345 . five_prime_UTR 9379 9497 . + . ID=g14445.t1.utr5p1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 9379 9530 . + . ID=g14445.t1.exon1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 9498 9530 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 9684 9746 . + . ID=g14445.t1.exon2;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 9684 9746 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 9939 10013 . + . ID=g14445.t1.exon3;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 9939 10013 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 10138 10299 . + . ID=g14445.t1.exon4;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 10138 10299 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 10460 10538 . + . ID=g14445.t1.exon5;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 10460 10538 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 10805 10928 . + . ID=g14445.t1.exon6;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 10805 10928 . + 2 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 11257 11287 . + . ID=g14445.t1.exon7;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 11257 11287 . + 1 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 11519 11700 . + . ID=g14445.t1.exon8;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 11519 11700 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 11805 11883 . + . ID=g14445.t1.exon9;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 11805 11883 . + 1 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 12281 12469 . + . ID=g14445.t1.exon10;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 12281 12469 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 12894 13079 . + . ID=g14445.t1.exon11;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 12894 13079 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 13449 13549 . + . ID=g14445.t1.exon12;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 13449 13549 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 13667 13751 . + . ID=g14445.t1.exon13;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 13667 13751 . + 1 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . exon 13870 14165 . + . ID=g14445.t1.exon14;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . CDS 13870 14070 . + 0 ID=cds.g14445.t1;Parent=g14445.t1 NODE_467_length_23204_cov_41.4345 . three_prime_UTR 14071 14165 . + . ID=g14445.t1.utr3p1;Parent=g14445.t1 #PROT g14445.t1 g14445 MLSSKASFAAQAVRLGFRGAHSAAASAAKASAPTTKLFINGQFVDSKTNKWLDVHNPATQEVVTRVPVATQDEMQAAVDSASAAFKSWSKTSVLTRQRVMFNLQHLIRQNMGEIAKSITIEQGKTLADAEGDVLRGLQVVEHACSVTSLMLGETAGSLSQDLDTYTYKFPLGVCAGIAPFNFPAMIPLWMFPMAVVCGNTYILKPSERDPGAAMMLTQLAKEAGLPDGVLNVIHGSVDSVNFICDNPAIRAVSFVGSDRAGAHIYGRASANGKRVQCNNGAKNHGIIMPDANKEMTLNQLVGAAFGAAGQRCMALSTAVFVGEAKEWMGDLIERAKNLKVNNGLLPGTDIGPLISPAAKDRVHRLIQSGVDEGASLILDGRNIRVPGYESGNFVGPTILTNVKPNMACYQEEIFGPVLVCLNVDTLDEAIEIINNNPYGNGTAIFTNSGATARKFQTEVDVGQIGINVPIPVPLPMFSFTGSRKSFFGDLNFYGKAGINFYTQTKTITSLWKETDATHRKAAVAMPTMR* # ORIGINAL: g5253.t1 original gene structure, not modified by PASA NODE_3200_length_4035_cov_33.5217 AUGUSTUS gene 2483 3634 . - . ID=g5253;Name=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS mRNA 2483 3634 . - . ID=g5253.t1;Parent=g5253;Name=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS exon 3579 3634 . - . ID=g5253.t1.exon1;Parent=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS CDS 3579 3634 . - 0 ID=cds.g5253.t1;Parent=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS exon 2943 3339 . - . ID=g5253.t1.exon2;Parent=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS CDS 2943 3339 . - 1 ID=cds.g5253.t1;Parent=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS exon 2483 2590 . - . ID=g5253.t1.exon3;Parent=g5253.t1 NODE_3200_length_4035_cov_33.5217 AUGUSTUS CDS 2483 2590 . - 0 ID=cds.g5253.t1;Parent=g5253.t1 #PROT g5253.t1 g5253 MQPPAPPHTLDLARCSDELSSHTPLTGNSDGPVAVTTSPKTPKRQDSTCSDGSELGLWARRVSEEGEAVGAGYAEPTGALEFDPLSASFAAIAAQRHADPNGDDHVRGVIGFGVPSAVVAATMTVGCGDSFLAGFAVRFASGGSLGDSLREGSACGGANALGSRPGHVDPKVVGKIFSTIKSTRIY* # PASA_UPDATE: g5252.t1, single gene model update, valid-1, status:[pasa:asmbl_5710,status:12], valid-1 NODE_3200_length_4035_cov_33.5217 . gene 77 2202 . + . ID=g5252;Name=g5252.t1 NODE_3200_length_4035_cov_33.5217 . mRNA 77 2202 . + . ID=g5252.t1;Parent=g5252;Name=g5252.t1 NODE_3200_length_4035_cov_33.5217 . exon 77 325 . + . ID=g5252.t1.exon1;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . CDS 77 325 . + 0 ID=cds.g5252.t1;Parent=g5252.t1;5_prime_partial=true NODE_3200_length_4035_cov_33.5217 . exon 546 923 . + . ID=g5252.t1.exon2;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . CDS 546 923 . + 0 ID=cds.g5252.t1;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . exon 1195 1352 . + . ID=g5252.t1.exon3;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . CDS 1195 1352 . + 0 ID=cds.g5252.t1;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . exon 1505 2202 . + . ID=g5252.t1.exon4;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . CDS 1505 1871 . + 1 ID=cds.g5252.t1;Parent=g5252.t1 NODE_3200_length_4035_cov_33.5217 . three_prime_UTR 1872 2202 . + . ID=g5252.t1.utr3p1;Parent=g5252.t1 #PROT g5252.t1 g5252 SLCGNVLISIALNVQKYAHGKNERAEVKVHYTKQKLWWAGLVLMVTGELGNFAAYAFAPASLVAPLGTATVISNAIIAPIFNKEPFRMRDLAGVIFAVIGAFVVIYFLNGPEEILDSAALAEHMSRPGFIVYVVILVLFGIAMFFADRKYGTRYLIVPLLLSAVFGSFTVLSAKAVSTLLTLSFNGDNQFVHPLIYFAAVILGVTAVMQVKFLNKAMQHFKATEVVPTFFVLFTIAAILAGIVLYGDFDGLSAKQIGMFFFGCFLTFVGVYLITSKRAAPEAPNEEATELGSTESNELKSIRNDDGMEDTFVGDEDGGETGKPRSRPPPSASATGGHKRRRRLSSHSGLNPVAIGTPFSGLAENESQGLLAGAAEMGVGEDYD* # PASA_UPDATE: g8284.t1, single gene model update, valid-1, status:[pasa:asmbl_1451,status:12],[pasa:asmbl_1452,status:12], valid-1 NODE_1395_length_11613_cov_50.5702 . gene 6405 8361 . - . ID=g8284;Name=g8284.t1 NODE_1395_length_11613_cov_50.5702 . mRNA 6405 8361 . - . ID=g8284.t1;Parent=g8284;Name=g8284.t1 NODE_1395_length_11613_cov_50.5702 . five_prime_UTR 8291 8361 . - . ID=g8284.t1.utr5p1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . exon 8263 8361 . - . ID=g8284.t1.exon1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . CDS 8263 8290 . - 0 ID=cds.g8284.t1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . exon 8003 8141 . - . ID=g8284.t1.exon2;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . CDS 8003 8141 . - 2 ID=cds.g8284.t1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . exon 7682 7813 . - . ID=g8284.t1.exon3;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . CDS 7682 7813 . - 1 ID=cds.g8284.t1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . exon 7065 7467 . - . ID=g8284.t1.exon4;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . CDS 7065 7467 . - 1 ID=cds.g8284.t1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . exon 6405 6734 . - . ID=g8284.t1.exon5;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . CDS 6669 6734 . - 0 ID=cds.g8284.t1;Parent=g8284.t1 NODE_1395_length_11613_cov_50.5702 . three_prime_UTR 6405 6668 . - . ID=g8284.t1.utr3p1;Parent=g8284.t1 #PROT g8284.t1 g8284 MPTGELHVTVVEGQELTGKSGGIGLNPYCWITLRDQRRRTDTKDNGEPHWDQLVMFNISEGDDRFVLEVFSDAGSESPEFIGGTEVWLNPVFQNPVNNAWYDIYKRNHEYAGKVHLVLGFEPANIVRPQQPQSLVQRQQTAAPQGQGQGQRPGYPPQGPNGQMPPPYYAYPPPPYGYGPPPPPPVYMAPPPAQVIYAAPPPPSVVYVNDPYYDPLLGVGVGLGVGALAFGAYGRPWGYHHGWGYGRHGWGGHHRW* # ORIGINAL: g8283.t1 original gene structure, not modified by PASA NODE_1395_length_11613_cov_50.5702 AUGUSTUS gene 4300 6109 . + . ID=g8283;Name=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS mRNA 4300 6109 . + . ID=g8283.t1;Parent=g8283;Name=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 4300 4302 . + . ID=g8283.t1.exon1;Parent=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 4300 4302 . + 0 ID=cds.g8283.t1;Parent=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 4530 5599 . + . ID=g8283.t1.exon2;Parent=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 4530 5599 . + 0 ID=cds.g8283.t1;Parent=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 6019 6109 . + . ID=g8283.t1.exon3;Parent=g8283.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 6019 6109 . + 1 ID=cds.g8283.t1;Parent=g8283.t1 #PROT g8283.t1 g8283 MSQKEEMRELIERTLNVAEKAARIARACRSDPCLFSLLVQEKKGSDANKRFVQDFKTLADVLIQETVRFDLSQRYPALNDHIYGEEDNKFTNAKGESVVLAVQPSEAETRDLLSTVLDGNEGAAASLASIVHDSVHSIAADDLPFLQLLDGAEFDVNNIGVWIDPIDGTNEYITAATPKSTDGIYSTGLATATVLIGAFDRSTGSPIAGVVNQPFYSRVGGCDDGAYVGRHLWGVCQDDVRVNNLPAKESRARQSFANGQTVVVVSASESAAALQALASIGATAVPAAACGYKQLCVIDGHADAYFLSKGSTYRWDTCGPDAILRSNGGGVFMQSGEGLTYHVPNPGSEGSEDKAAKWNNAGGIIAARNTPVARKLSAVVWDAIRKQ* # PASA_UPDATE: g8282.t1, single gene model update, valid-1, status:[pasa:asmbl_1450,status:12], valid-1 NODE_1395_length_11613_cov_50.5702 . gene 203 3918 . + . ID=g8282;Name=g8282.t1 NODE_1395_length_11613_cov_50.5702 . mRNA 203 3918 . + . ID=g8282.t1;Parent=g8282;Name=g8282.t1 NODE_1395_length_11613_cov_50.5702 . five_prime_UTR 203 204 . + . ID=g8282.t1.utr5p1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 203 325 . + . ID=g8282.t1.exon1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 205 325 . + 0 ID=cds.g8282.t1;Parent=g8282.t1;5_prime_partial=true NODE_1395_length_11613_cov_50.5702 . exon 455 529 . + . ID=g8282.t1.exon2;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 455 529 . + 2 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 785 902 . + . ID=g8282.t1.exon3;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 785 902 . + 2 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 1101 1231 . + . ID=g8282.t1.exon4;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 1101 1231 . + 1 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 1570 1609 . + . ID=g8282.t1.exon5;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 1570 1609 . + 2 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 1912 1963 . + . ID=g8282.t1.exon6;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 1912 1963 . + 1 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 2274 2336 . + . ID=g8282.t1.exon7;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 2274 2336 . + 0 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 2676 2762 . + . ID=g8282.t1.exon8;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 2676 2762 . + 0 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 2957 3043 . + . ID=g8282.t1.exon9;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 2957 3043 . + 0 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . exon 3328 3918 . + . ID=g8282.t1.exon10;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . CDS 3328 3594 . + 0 ID=cds.g8282.t1;Parent=g8282.t1 NODE_1395_length_11613_cov_50.5702 . three_prime_UTR 3595 3918 . + . ID=g8282.t1.utr3p1;Parent=g8282.t1 #PROT g8282.t1 g8282 LAHARDNLPAAEEFFRHEYKLNHLIHTLNKPFLAVMNGITMGGGVGISAHGRFRIATEKTVFAMPETAIGLFPDVGGSYLLSRMDGALGMYLGLTGDKLHGSDVYFAGIATDFMMSAKLPEFHEFVRKMPIVDNESVANALSDFSDEASLPTFERDLEAINKCFSKATVEDIIIALQKEASPWAEKTLAMLKKSSPTSLKVTHQLISKVKKLTLADALKMEFRLAMRFMQGHDFFEGVRAVLVDKTNNPHWNPAQLEQVKDHNVAKYFEFMGNQELQLLDRPAPTQSYALITEQDVRALITSSPLTRNDLFRLLARKMWKPSEHEHVSRIVNRIAHNRGGALVLKR* # ORIGINAL: g8285.t1 original gene structure, not modified by PASA NODE_1395_length_11613_cov_50.5702 AUGUSTUS gene 9469 11375 . + . ID=g8285;Name=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS mRNA 9469 11375 . + . ID=g8285.t1;Parent=g8285;Name=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 9469 9568 . + . ID=g8285.t1.exon1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 9469 9568 . + 0 ID=cds.g8285.t1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 9836 10156 . + . ID=g8285.t1.exon2;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 9836 10156 . + 2 ID=cds.g8285.t1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 10360 10518 . + . ID=g8285.t1.exon3;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 10360 10518 . + 2 ID=cds.g8285.t1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 10703 10852 . + . ID=g8285.t1.exon4;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 10703 10852 . + 2 ID=cds.g8285.t1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 10989 11074 . + . ID=g8285.t1.exon5;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 10989 11074 . + 2 ID=cds.g8285.t1;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS exon 11307 11375 . + . ID=g8285.t1.exon6;Parent=g8285.t1 NODE_1395_length_11613_cov_50.5702 AUGUSTUS CDS 11307 11375 . + 0 ID=cds.g8285.t1;Parent=g8285.t1 #PROT g8285.t1 g8285 MTRSFVDVPFFAGKRMTCVAAGREHSAVVTDDGVYTFGASTLGQCGRPPLAAHDMHDIRGDWQPYKLPFDAGSVASVVCGMDHTLVLTRDGRLHAMGWAADGQSGQGVTADTREPTLVAAFRETKVTAVSSRVDCSLAITEHGDVFAWGNSEYGQTMLGKSVDKYTLPVRIEGLAGRGIVAVAAGGSFSLALSASGDVYVGGYGAMGLGKDVRETGGPVRIDALSGERVRMIACGSDHAVAVTADGRVFTFGSGIWGRLGHGSQSDQSEPRQVALADRIRRVSVGVDHVLALAE* # ORIGINAL: g13368.t1 original gene structure, not modified by PASA NODE_4508_length_1524_cov_40.4161 AUGUSTUS gene 340 1142 . + . ID=g13368;Name=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS mRNA 340 1142 . + . ID=g13368.t1;Parent=g13368;Name=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS exon 340 465 . + . ID=g13368.t1.exon1;Parent=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS CDS 340 465 . + 0 ID=cds.g13368.t1;Parent=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS exon 619 739 . + . ID=g13368.t1.exon2;Parent=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS CDS 619 739 . + 0 ID=cds.g13368.t1;Parent=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS exon 1009 1142 . + . ID=g13368.t1.exon3;Parent=g13368.t1 NODE_4508_length_1524_cov_40.4161 AUGUSTUS CDS 1009 1142 . + 2 ID=cds.g13368.t1;Parent=g13368.t1 #PROT g13368.t1 g13368 VRFDTRIWHPNISSQTGAICLDILKDQWAAAMTLRTVLLSIQALMQSPEPDDPQDAVVANQYKSNRALFTQTAKNWTDMYAKGTPDPTKDPKVKQLVEMGFDVAKCVDALAKTGGDVERAIESLFS* # PASA_UPDATE: g4580.t1, single gene model update, valid-1, status:[pasa:asmbl_5430,status:12], valid-1 NODE_301_length_27654_cov_42.5302 . gene 16439 23187 . + . ID=g4580;Name=g4580.t1 NODE_301_length_27654_cov_42.5302 . mRNA 16439 23187 . + . ID=g4580.t1;Parent=g4580;Name=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 16439 16480 . + . ID=g4580.t1.exon1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 16439 16480 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 16667 16927 . + . ID=g4580.t1.exon2;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 16667 16927 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 17156 17705 . + . ID=g4580.t1.exon3;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 17156 17705 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 17974 18095 . + . ID=g4580.t1.exon4;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 17974 18095 . + 2 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 18393 18547 . + . ID=g4580.t1.exon5;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 18393 18547 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 18926 19185 . + . ID=g4580.t1.exon6;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 18926 19185 . + 1 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 19504 19612 . + . ID=g4580.t1.exon7;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 19504 19612 . + 2 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 19865 20045 . + . ID=g4580.t1.exon8;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 19865 20045 . + 1 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 20384 21589 . + . ID=g4580.t1.exon9;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 20384 21589 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 21777 21907 . + . ID=g4580.t1.exon10;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 21777 21907 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 22130 22203 . + . ID=g4580.t1.exon11;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 22130 22203 . + 1 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 22358 22479 . + . ID=g4580.t1.exon12;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 22358 22479 . + 2 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . exon 22695 23187 . + . ID=g4580.t1.exon13;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . CDS 22695 22892 . + 0 ID=cds.g4580.t1;Parent=g4580.t1 NODE_301_length_27654_cov_42.5302 . three_prime_UTR 22893 23187 . + . ID=g4580.t1.utr3p1;Parent=g4580.t1 #PROT g4580.t1 g4580 MGDEDDTVHNLWTQGFAKPDWDTIHPREGVRSQALKRRSVVPTNILDQQQQPAHLAGKGVFGSHGLLGPSAVELMATPEKRPARRSIAGRKSILPRPPMPLPGDSVGFIEESPAKSVTLLDPMRNSPRRVESPRVFVPSVDDRFVPQHYAPQQLQQQQPSRVSEAGLGGRHRDSLAFRQSFLSSSPADVPWGYSRPSYGGYEEEGEATMDLTQTLEGNVRTRPAQSLYDSFVSSVEGDRSRAGRIPGSLNASAISAAVGEQSFVVTAVGEEVDVRGPAAKILGDVERSFAQIVEEAAFDAASVDGAPNPIAAAAEYKAVLGRALEELKAAAVAPNARPAHIAAAQYAARRIKAEVDTWTIAEALFKDRLDTMAKEQGYHVHEIGGDVNVAQLLSARPRMGATDKEVAFGLFDSDASVRHLQIAIDWLERLARESRDEGMDKAQYYLSSVSWEHTLKARQMAARGAATARSKTDFITEFDPDAPFRQGAKLHDDDKEDEQRLARDVFALIRSGQMAEAINLCRGCGQGWRAAALAGWRPYHDHVMAVVTGSALSDDDTAPNIEGNLFRDVWKASCRALARSDAVVSVEEKASFASLCGDLAHILPACRSWEDELWARLRSAVESRVDRELASSSLVPRVRDEWVSVDADGGFFEDGDGANNASARVATTFDAIFSQMRASGIAEVRQAIGGDVFRRLQEGVLRNDAEFLAGEVIALTETPVSGRQEGHPFPPNTDMAVALAACDVRFAAHLVLFLRAAGVHVAGELEQRVLHTYVDRLIASNGAELVAPYASRLNDGVDVYASFLSKFTDSETRRLLIDRARKCGMDTAHVTLTLVETVKATPVDVEGSVVGGRTVTQTEGAEVTAGDMRKIDALEWLCFDLVQRGEVVRQGNALMRAFLAAGRMKAAEEVFARIPEDSVGVVEAMYSGGDATVPCLGTSKPPRIAAAVREYLSFQSYFAAHAAFSEWFDHFHRAPQQLGANGSSRDMVGEMHAMHQRQVYETEFERWRATLDELTDATVQTFYNVLLFPEGWMSDGEDYSEPESHDDEMRLRQLELLRRDGIPYVCFLLHKVLHDTLRHRACVSIADIVADEYRGLYKCFDRSELQRLLSLIRESALEILGEECADPLGYGAATGH* # PASA_UPDATE: g4576.t1, single gene model update, valid-1, status:[pasa:asmbl_5429,status:3], valid-1 NODE_301_length_27654_cov_42.5302 . gene 4096 6668 . + . ID=g4576;Name=g4576.t1 NODE_301_length_27654_cov_42.5302 . mRNA 4096 6668 . + . ID=g4576.t1;Parent=g4576;Name=g4576.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 4096 4254 . + . ID=g4576.t1.utr5p1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 4371 4417 . + . ID=g4576.t1.utr5p2;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 4096 4254 . + . ID=g4576.t1.exon1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 4371 4458 . + . ID=g4576.t1.exon2;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 4418 4458 . + 0 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 4566 4651 . + . ID=g4576.t1.exon3;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 4566 4651 . + 1 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 4790 5025 . + . ID=g4576.t1.exon4;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 4790 5025 . + 2 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 5229 5322 . + . ID=g4576.t1.exon5;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 5229 5322 . + 0 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 5557 5650 . + . ID=g4576.t1.exon6;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 5557 5650 . + 2 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 5979 6071 . + . ID=g4576.t1.exon7;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 5979 6071 . + 1 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 6226 6304 . + . ID=g4576.t1.exon8;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 6226 6304 . + 1 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . exon 6454 6668 . + . ID=g4576.t1.exon9;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . CDS 6454 6540 . + 0 ID=cds.g4576.t1;Parent=g4576.t1 NODE_301_length_27654_cov_42.5302 . three_prime_UTR 6541 6668 . + . ID=g4576.t1.utr3p1;Parent=g4576.t1 #PROT g4576.t1 g4576 MTGSLDDTVRTWTWNGSELQQKRVLEGHQLGVTSVDMNSTATLAVSTSLDNHVKLWDVERGSLLRSIDAGPVEACTARLSPDSKRIATSCHSGGINIFGVESGQREQTFETHGKFSMCTAFSQNGKYVACGAIDGVVSIFDVVSGRIVHKLEGHTKAVRAVTFSPDSELIVTASDDSSIRMYDVDHANLVGSFTGHSSWILNVKFSPNNTMFATGSSDKKVKLWDSTQRMCSHTFDTHVDQVWSVAYNEKGDRLVSVSDDRKIMIHDTA* # ORIGINAL: g4574.t1 original gene structure, not modified by PASA NODE_301_length_27654_cov_42.5302 AUGUSTUS gene 1237 1853 . + . ID=g4574;Name=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS mRNA 1237 1853 . + . ID=g4574.t1;Parent=g4574;Name=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 1237 1431 . + . ID=g4574.t1.exon1;Parent=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 1237 1431 . + 0 ID=cds.g4574.t1;Parent=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 1542 1642 . + . ID=g4574.t1.exon2;Parent=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 1542 1642 . + 0 ID=cds.g4574.t1;Parent=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 1772 1853 . + . ID=g4574.t1.exon3;Parent=g4574.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 1772 1853 . + 1 ID=cds.g4574.t1;Parent=g4574.t1 #PROT g4574.t1 g4574 MSSGLEVPSLKDEARRAIPDVAFGVDHISHTAALKPANPEESQYLNVRIKEGDAYTVELSRSGYKICGNGFESAPPDGCDGKTFETLHQLLDHISPSYRDAFGTTLSAKLSLLSQQRLASNDDDE* # PASA_UPDATE: g4581.t1, single gene model update, valid-1, status:[pasa:asmbl_5422,status:12],[pasa:asmbl_5423,status:12],[pasa:asmbl_5426,status:12],[pasa:asmbl_5427,status:12],[pasa:asmbl_5428,status:12], valid-1 NODE_301_length_27654_cov_42.5302 . gene 23384 26529 . - . ID=g4581;Name=g4581.t1 NODE_301_length_27654_cov_42.5302 . mRNA 23384 26529 . - . ID=g4581.t1;Parent=g4581;Name=g4581.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 26281 26529 . - . ID=g4581.t1.utr5p1;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . exon 25193 26529 . - . ID=g4581.t1.exon1;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . CDS 25193 26280 . - 0 ID=cds.g4581.t1;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . exon 24735 24972 . - . ID=g4581.t1.exon2;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . CDS 24735 24972 . - 1 ID=cds.g4581.t1;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . exon 23838 24543 . - . ID=g4581.t1.exon3;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . CDS 23838 24543 . - 0 ID=cds.g4581.t1;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . exon 23384 23607 . - . ID=g4581.t1.exon4;Parent=g4581.t1 NODE_301_length_27654_cov_42.5302 . CDS 23384 23607 . - 2 ID=cds.g4581.t1;Parent=g4581.t1 #PROT g4581.t1 g4581 MTSEADIKKLRVPELKAELERLGLPTGGLKPVLVERLLAHHAVSASFLSEGNEDAHAEDAVMAENEEAPAPETVPVAPEPVHAPAPAPVVAPVVAPVVTPVPTPAVAHIAAPVATASPSKPVAVAVAAAPVVQLTPQAPIAAVPQVKVDATVDADEDEDEDDVGDALPAQDGNRNDKNVKRRRKKKKKKSRNNGGREVDDAETDTGAAPADDVEIEYIAEPISFDASDPNFAEFAHVFEVFKMDSGSKEDGDVKAAGEDKEAVPADGAVAMDVSDETKVNNNNVNAAKKGGDDDSDSDSEGEDGETKDRMSKKKLRKLNRLSVAELKQLVTRPDVVEIHDVTAQDPRLLVLLKSSRNTVPVPKHWAQKRKYLQNKRGIEKAPFDLPEFIKMTGITEMREALNDKEKEKTLKSKQRERVRPKMGKLDIDYQKLHDAFFKWQTKPRMTSHGDLYYEGKEFETRLKEKKPGNLSDDLKTALGMPTGSGSERFPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPDGSLFGFHPGGWGKPPVDEFGRPLYGDVFGASAGDMISVEPVQADKQRWGELDEEEEADESEEEEEEGADASEREEGNGPVSGLETPSGLASVPSGIETPDIIELRKRKIIEDEMESGDVQKNLYTVIPEKKTSVGGAMVGSAYVYDVNAARKQQQEQAGIDVALAPDELDQLDEAVQARYAEEQQRGTDGAGSKQENFSDMVAEHAAREQRKRKKKEQDGKPAKKLKEFRF* # ORIGINAL: g4573.t1 original gene structure, not modified by PASA NODE_301_length_27654_cov_42.5302 AUGUSTUS gene 92 358 . + . ID=g4573;Name=g4573.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS mRNA 92 358 . + . ID=g4573.t1;Parent=g4573;Name=g4573.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 92 358 . + . ID=g4573.t1.exon1;Parent=g4573.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 92 358 . + 0 ID=cds.g4573.t1;Parent=g4573.t1 #PROT g4573.t1 g4573 ILHARQVDQRSTLYQRALATGEQYEQNARAMLLRMSVNQHNFQVRAPPKDTDRHERRLGGGSHPERKELHGHQFDVHGGNSTPPTNLD* # PASA_UPDATE: g4579.t1, single gene model update, valid-1, status:[pasa:asmbl_5421,status:3], valid-1 NODE_301_length_27654_cov_42.5302 . gene 13688 15817 . - . ID=g4579;Name=g4579.t1 NODE_301_length_27654_cov_42.5302 . mRNA 13688 15817 . - . ID=g4579.t1;Parent=g4579;Name=g4579.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 15619 15817 . - . ID=g4579.t1.utr5p1;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . exon 15306 15817 . - . ID=g4579.t1.exon1;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . CDS 15306 15618 . - 0 ID=cds.g4579.t1;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . exon 14997 15154 . - . ID=g4579.t1.exon2;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . CDS 14997 15154 . - 2 ID=cds.g4579.t1;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . exon 13688 14799 . - . ID=g4579.t1.exon3;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . CDS 14386 14799 . - 0 ID=cds.g4579.t1;Parent=g4579.t1 NODE_301_length_27654_cov_42.5302 . three_prime_UTR 13688 14385 . - . ID=g4579.t1.utr3p1;Parent=g4579.t1 #PROT g4579.t1 g4579 MGCGSSKDADSNHGDSPKSKHDSKKGKKHDSGSESDGGHGKKKAPAKGGKGGKGDKGGKGKGKGSDSESDDGHKKKGGKKRAHSPPASATSNTSDDSRRGEWQKAPAKKPVAFEIDIDPKMKTPSKKPPTLSSSHKREELTQEALEAKLAAAEDRRRDLEHARERRIEKMEQRRKEIEMRKKSKGSNDSDDEHEGRGRSKSRNSSRSSSRSRSPPPAKGKKGAATPKKKAVKRSDDSDASDSDFGKKKAPAKGKAKKGKAKDSGSESDSGAKAKPKGKGKATPAKKGRKGSDSD* # PASA_UPDATE: g4575.t1, single gene model update, valid-1, status:[pasa:asmbl_5419,status:12],[pasa:asmbl_5425,status:12], valid-1 NODE_301_length_27654_cov_42.5302 . gene 1960 3647 . - . ID=g4575;Name=g4575.t1 NODE_301_length_27654_cov_42.5302 . mRNA 1960 3647 . - . ID=g4575.t1;Parent=g4575;Name=g4575.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 3598 3647 . - . ID=g4575.t1.utr5p1;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . exon 3595 3647 . - . ID=g4575.t1.exon1;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . CDS 3595 3597 . - 0 ID=cds.g4575.t1;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . exon 3094 3162 . - . ID=g4575.t1.exon2;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . CDS 3094 3162 . - 0 ID=cds.g4575.t1;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . exon 1960 2650 . - . ID=g4575.t1.exon3;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . CDS 2327 2650 . - 0 ID=cds.g4575.t1;Parent=g4575.t1 NODE_301_length_27654_cov_42.5302 . three_prime_UTR 1960 2326 . - . ID=g4575.t1.utr3p1;Parent=g4575.t1 #PROT g4575.t1 g4575 MSDTAATIRTRKFLTNRLLQRKQMVVDVLHPGRANVPKNELREKLAKLYKSPLEHVSVFGFRTQFGGGKSTGFALVYDSVEALKRFEPKYRQFRLGLGEKATGSRKQRKERKNRAKKVRGIKKAKVGAAKK* # ORIGINAL: g4578.t1 original gene structure, not modified by PASA NODE_301_length_27654_cov_42.5302 AUGUSTUS gene 8284 13363 . + . ID=g4578;Name=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS mRNA 8284 13363 . + . ID=g4578.t1;Parent=g4578;Name=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 8284 10406 . + . ID=g4578.t1.exon1;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 8284 10406 . + 0 ID=cds.g4578.t1;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 10666 10756 . + . ID=g4578.t1.exon2;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 10666 10756 . + 1 ID=cds.g4578.t1;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 11071 12061 . + . ID=g4578.t1.exon3;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 11071 12061 . + 0 ID=cds.g4578.t1;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 12402 12775 . + . ID=g4578.t1.exon4;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 12402 12775 . + 2 ID=cds.g4578.t1;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS exon 12998 13363 . + . ID=g4578.t1.exon5;Parent=g4578.t1 NODE_301_length_27654_cov_42.5302 AUGUSTUS CDS 12998 13363 . + 0 ID=cds.g4578.t1;Parent=g4578.t1 #PROT g4578.t1 g4578 MDPARELLVSAPNDDLRALITAHRAKQREQAGKKKPQPQQQVDASTIGGPSRQQQQPARGTGMRGPGSRMSASTASLLNITVGQTTQPSTSTVDDDDRLVLGGHAAYNVFKTEEGKLRSRIKSGNNSRSPSPSPKGTPTRRRRNSRTIARIYDAGGGAAPQGTMEILAPDIFDPKQSDSMQGTDKEPSCARGRRRSRAGMNERQGGESNEGKFGGPSSSSSGAKLVPVAARQAEIGGIGQPDRGHVRFSTESKPDGSQEMAAKEADATPEKKEKKARHVYDEYWTAKKVSAGLKSGELLRGKLRINQNKTNDAYVPVERFARDVYVGGMRGRNRALDGDTVVIRLLPRHQWRIMEREWHAARKAAAGASISVDIMEAPTVTTSTTTLDPLTSAIPSTPSVSDLGPDSDKLQYFGFLRGPSQAMAGAKGAPTSVGSRTNSSLSIGGPQSGPSRQQHQRGAGAQPPAAPAGAAKKKDNDYAHAAVPDEYLQPAGTVVFVERKALTTFTGHLRPYKPFSSADDDVGGAGRGTQSIERTRSPSPSLHRSSVADQGRRESTTAASSSFSKGASRSTKRERRASVQGDGSFVDPKCEHLLASFLLSEVDAAHVNPHEGALALFVPLDRRLPRMSIDGAACPAGFFGSPSTFARTLFSARLVEWRADSELATGALLGTLGQSGEIEAETAALLAENDVDTRPFPAPSLACLPDKDWAIPQTEVQHRKDYRLSGTRIFSIDPATAKDIDDALHCIANKDGTFEVGVHIADVSYFVEQKTALDHLAENRATTVYLVDRAIPMLPARLSEDLCSLNPMADRLAFSIVWRLSAKGDILSEWIGRTIIHSCCKLSYDTAQAMIDLPEGPSELWGAPEVEFPHHAEDVMKDVLNLNRLAKNLRRARFDGGALRLDRARLSFKTDKATGLPESFHTYEIRDSNRLIEEFMLLANMSVAKRVYASCPGLALLRSHPKPLPRKMDEFIALCASAGVQLNGQTAGTLQHSLDDFLAKKKDGVVHAAVQMMATRPMQTAQYFCTGAGGTLSEFRHYALNCGLYTHFTSPIRRYADIIVHRLLAASLGIGPAVSLQTSDIASIATHCNDRKSAAKKAQEQSEFVFLCVYLSSYGPVQYQGVVTNVMDRSFEVVVPALGIQSRVWCDDLPLEEYTWSEKERELCLVWKPAVHKAGVQKGIAAIKAKQQRRDSKAAVSMRAYRRRASEMNLERPLPGAAGPGHGLASLSEPSEEAGESRAPRRSISVAVGRTPMPMPVTAANDGVSRAAGVSVNGEGELTTRIRLLAKLKVSVSANMRRIPAEVSVAPVRPDPTA* # PASA_UPDATE: g4577.t1, single gene model update, valid-1, status:[pasa:asmbl_5420,status:3], valid-1 NODE_301_length_27654_cov_42.5302 . gene 6714 7641 . - . ID=g4577;Name=g4577.t1 NODE_301_length_27654_cov_42.5302 . mRNA 6714 7641 . - . ID=g4577.t1;Parent=g4577;Name=g4577.t1 NODE_301_length_27654_cov_42.5302 . five_prime_UTR 7500 7641 . - . ID=g4577.t1.utr5p1;Parent=g4577.t1 NODE_301_length_27654_cov_42.5302 . exon 7235 7641 . - . ID=g4577.t1.exon1;Parent=g4577.t1 NODE_301_length_27654_cov_42.5302 . CDS 7235 7499 . - 0 ID=cds.g4577.t1;Parent=g4577.t1 NODE_301_length_27654_cov_42.5302 . exon 6714 7101 . - . ID=g4577.t1.exon2;Parent=g4577.t1 NODE_301_length_27654_cov_42.5302 . CDS 6887 7101 . - 2 ID=cds.g4577.t1;Parent=g4577.t1 NODE_301_length_27654_cov_42.5302 . three_prime_UTR 6714 6886 . - . ID=g4577.t1.utr3p1;Parent=g4577.t1 #PROT g4577.t1 g4577 MSATMLAARASMAARGALRICQTVGVSQPSLQSAVGGALRPVTGAVCVGMRVDARGYAAPAKGDKKDKGAKKGDKKKKGAPALRKAEPPVIPDPLLVTGLNVMKDGRDPPLRPDSEYPDWLWSLADPLPPSGSLTPSDAMYWRVTNRIKIRQRNLELRK* # ORIGINAL: g5832.t1 original gene structure, not modified by PASA NODE_2909_length_4765_cov_50.4311 AUGUSTUS gene 88 4583 . - . ID=g5832;Name=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS mRNA 88 4583 . - . ID=g5832.t1;Parent=g5832;Name=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 3494 4583 . - . ID=g5832.t1.exon1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 3494 4583 . - 0 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 3143 3337 . - . ID=g5832.t1.exon2;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 3143 3337 . - 2 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 2542 2989 . - . ID=g5832.t1.exon3;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 2542 2989 . - 2 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 2165 2251 . - . ID=g5832.t1.exon4;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 2165 2251 . - 1 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 1915 1992 . - . ID=g5832.t1.exon5;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 1915 1992 . - 1 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 1562 1615 . - . ID=g5832.t1.exon6;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 1562 1615 . - 1 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 1280 1416 . - . ID=g5832.t1.exon7;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 1280 1416 . - 1 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 500 1073 . - . ID=g5832.t1.exon8;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 500 1073 . - 2 ID=cds.g5832.t1;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS exon 88 250 . - . ID=g5832.t1.exon9;Parent=g5832.t1 NODE_2909_length_4765_cov_50.4311 AUGUSTUS CDS 88 250 . - 1 ID=cds.g5832.t1;Parent=g5832.t1 #PROT g5832.t1 g5832 MVGNDATRNGGGVYAGQQADMTFSNSSVANGTAKAGGGIYVLDDAIARLGGMRMSWSVAKVSGGAVAMHDASTLYAPNCTFEGNVAQLTDGGAIYTEAHKLLVVNASTFINNAAAFSGGAISLTQSTDRDAVIDRCVFVGNTATQSSAVHLTNADLVPVGLENGTSGTNLFQNNSALSGARAMSTRPVRLSATLSLDVVSSSVAVPNSNDNNNASAVARRSAVSLRQAPVSLSILSGGRTPTIRVVSVDRFGEQVATNPSEQLMVIKASLWRTGSASGARSGAGDGDVVGETQKALLGGIAEFLPLQIIADNGSYVLVLESSTPVFSALDFNVQMPVTIQNCPSGMVLQATSASRLGYRICVDAVCKQGCLRGSCIDMDVCQCSAGYQGASCELPVCPRDCAGHGTCTAPGTCLCEQRYSGSDCSTYTAPDGINTLGIGLGVTFGVLFVVGVVVLVLLRTRALATTELESEWKIPVSQLEEDTGDALGSKAFIVRKISAFSQERQTPLGSAGSVAAAASTTVGGNTRASPQLNRVQSVGPPPQGQAQGHGQGQGQGQGIQAAHPFDYGSEPNIAVKKWNGMLVAVAKLRLGMRTPPLFIVKDICMLRRIRHPNVSLFFGVAYADSTPVGLVEEFCAKGSLADTLQNQEILLDWSFRFSFIVDVAKGVDFLHRNGIVHGRLNSSCLVIDNRWTVKVADHGIPLLRQHLASLVPPSENDAPDAASSTQFPSAEPADAPSRAEHRGNIHAHAIDMNGKDDTPSAAAPQLTVHTDPGVSTNGTLGVPLSSRSNRIREATSSVESGRKESADRSLASSLIASFRDRDSLLGRLTNSVKRNAKVGVAPAVPQFEPRWKSYFEECVDLCEPARLLWSAPEVIRCQAATRKSDSFSYGIVLWEIINRRRPFDEVMDVDILPLVHRIAVEQLRPDDFVGGGTDIDAFHVAK # ORIGINAL: g12251.t1 original gene structure, not modified by PASA NODE_1950_length_8386_cov_39.1197 AUGUSTUS gene 2 4447 . + . ID=g12251;Name=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS mRNA 2 4447 . + . ID=g12251.t1;Parent=g12251;Name=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 2 1973 . + . ID=g12251.t1.exon1;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 2 1973 . + 1 ID=cds.g12251.t1;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 2262 2990 . + . ID=g12251.t1.exon2;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 2262 2990 . + 0 ID=cds.g12251.t1;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 3293 3503 . + . ID=g12251.t1.exon3;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 3293 3503 . + 0 ID=cds.g12251.t1;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 3861 4447 . + . ID=g12251.t1.exon4;Parent=g12251.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 3861 4447 . + 2 ID=cds.g12251.t1;Parent=g12251.t1 #PROT g12251.t1 g12251 GGTAKAEVVGATVAGMSSEVGGFAATFDTSTLSVSGSVLSGARATGSSITDGNGGLVAAGGSSSVVLSASVLTDCQAALSGGVIDVRDDAQFIGTGLTASALRSVNGAFAYIINTGTAPSLILRLSNITDAVASFEGAIAYVDAYASATVEDCNFADVSAPYGGVLSCDFGNDLTVNRVRIRGVTSTLGGIYVADCALTGDAVVFENATAEQGALIFAVSRGTVVLKNANISNIVATSYCGAIYIGSDKGTTVIIRTSVFVNITATKGICIACALGRSELYMRTVSMEDVYSGGGSLILAQDQAKLDLRPLIIVRRYTSPYSGLFTVRGAATAVLADVTVEDVVSYIASVLSSEGTSSVTINRISVARATTTAEGGLFYCLGLSNVVIRDVTTTGLDGFAGAVGLAGGNASLTLQRISVNGVHSIQDGGMLKVVDNATLVLRDSVFSDGVSENSGGFLSIEGSAHVAMDNITVRSVVSRGSSRGGGFISCWLGIRPYSITMLVRKQYLPPALRMSNVHVTDARAAASGGCLAIDVETILRIANSSFDGCTAGVNPKLFASGGFLYAGDASVAADWSIENIAVTRSTAALGAFIFTAHALPSSVRAAASSFTVANSSSVYESGPIFATPVKSLDPKFDRDNASSLIIESGTALTGALRIVAKDAYNQSVYVPPVRGLTVVLAAVDSAPALAGASLQVVGSVQATFMTPVIELRGIEFYGIPGASYKLRLQSGNVLYSETNADDASLFGAQLTVTLTGCNGQRWLVSDTQYEPPRIGCQPAKCMPACQHGSCVRAGEELSGDFSCTCDYGWAGKGCDVPVMYTVLAVGLAASLFLATMSFIRYRGAVAAHMRTEYQHWRSKENRTTVAILVKQVSAKFIDAVGLAVDAAALAEMSSRPPALQYGVLPAYLAFFAVGTLAVIVSAVASYVRVRYMLAVVKHPERADDMMLLWRKLFVTISILLIALFKNVPMIGLNAYVTKMDSGHCVTVDGAFILAFVWSAYSVGSKMPRFGKLVQLVRAYMSATRDVGASPCASFHSEKATSSDICDLDRDHLGCEKSLSGNPGVSCSSGSVASAQSGAMVGRGKASVWSWIPRFGKAGKRSNCLPVDREVSASLPTVKRRPNDSAYGPSGRESVVSTDGLQLQSQSTTGLVQPDEHDDNFESVEM* # ORIGINAL: g12252.t1 original gene structure, not modified by PASA NODE_1950_length_8386_cov_39.1197 AUGUSTUS gene 5316 7269 . - . ID=g12252;Name=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS mRNA 5316 7269 . - . ID=g12252.t1;Parent=g12252;Name=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 6370 7269 . - . ID=g12252.t1.exon1;Parent=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 6370 7269 . - 0 ID=cds.g12252.t1;Parent=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 5832 6138 . - . ID=g12252.t1.exon2;Parent=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 5832 6138 . - 0 ID=cds.g12252.t1;Parent=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS exon 5316 5662 . - . ID=g12252.t1.exon3;Parent=g12252.t1 NODE_1950_length_8386_cov_39.1197 AUGUSTUS CDS 5316 5662 . - 2 ID=cds.g12252.t1;Parent=g12252.t1 #PROT g12252.t1 g12252 MGSQSSTARHSVVEVEVSPKARGLDPSRLSFTQPKSTNGNSDSLEVMDNITSTSELEKMVYNAVKGATEEIRSKPRLTILMAGESGSGKSSAANYVFQMDLAACHAGRPETAGCVEHRHPTQNINLVDTRGLERGKKAHDEVLLTVGAYLDSRPRTAPVHACWYFVQRWHEDSDTPTVESLLRRGIPVVYVVAKADTRFSEDNDTIERTIREKHAAIVRRLGVIMSAEAVVIRVATPSREGNWEIPTACLDCRCSDISAKVSGGKGQWQCESCGRRGPLERRTFMGHADLVHATFNVLQSESQRNALVAAQTVDVNSKRGVIGGIVTAATLGAAVIGCSPIPFSDAALLVPLQVVMVVNICFVYNTSPKDIIKWLIRRLALCGVCALVGIGLVNLLRLVPGAGTIAAAAIEGPVAAGLTFALGVTVAAMCDYNLRQRKEILKTKGADMANAMPTQFPDQTSLDSAMDMCTKLFKSINPGRDDMSQLIAGKVEEMSCAMCKDMVDTTPPTLARLSERR* # PASA_UPDATE: g8807.t1, single gene model update, valid-1, status:[pasa:asmbl_5441,status:12], valid-1 NODE_3025_length_4508_cov_39.0205 . gene 3954 4475 . - . ID=g8807;Name=g8807.t1 NODE_3025_length_4508_cov_39.0205 . mRNA 3954 4475 . - . ID=g8807.t1;Parent=g8807;Name=g8807.t1 NODE_3025_length_4508_cov_39.0205 . exon 3954 4475 . - . ID=g8807.t1.exon1;Parent=g8807.t1 NODE_3025_length_4508_cov_39.0205 . CDS 4188 4475 . - 0 ID=cds.g8807.t1;Parent=g8807.t1 NODE_3025_length_4508_cov_39.0205 . three_prime_UTR 3954 4187 . - . ID=g8807.t1.utr3p1;Parent=g8807.t1 #PROT g8807.t1 g8807 MQLPVKQPKWTLHVASDGRYAVMRRGRSESLTFDVDFDALSIGESISFELVSSYYVNCALQKTLREQLPKWTEVWGKSNSPGPLYIRTRSAVTGA* # PASA_UPDATE: g8806.t1, single gene model update, valid-1, status:[pasa:asmbl_5442,status:12],[pasa:asmbl_5443,status:12], valid-1 NODE_3025_length_4508_cov_39.0205 . gene 297 3951 . + . ID=g8806;Name=g8806.t1 NODE_3025_length_4508_cov_39.0205 . mRNA 297 3951 . + . ID=g8806.t1;Parent=g8806;Name=g8806.t1 NODE_3025_length_4508_cov_39.0205 . five_prime_UTR 297 790 . + . ID=g8806.t1.utr5p1;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . exon 297 1945 . + . ID=g8806.t1.exon1;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . CDS 791 1945 . + 0 ID=cds.g8806.t1;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . exon 2388 2977 . + . ID=g8806.t1.exon2;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . CDS 2388 2977 . + 0 ID=cds.g8806.t1;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . exon 3175 3951 . + . ID=g8806.t1.exon3;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . CDS 3175 3466 . + 1 ID=cds.g8806.t1;Parent=g8806.t1 NODE_3025_length_4508_cov_39.0205 . three_prime_UTR 3467 3951 . + . ID=g8806.t1.utr3p1;Parent=g8806.t1 #PROT g8806.t1 g8806 MASRLSRVGSDRSKDQGMSDRVRVAAANAKTGVPISDCPAAGLKAMAGSYAGYLERRTKGIMSSWQRTYVVLLDGCVYYFKSADAPKASGQSSLIGYTLDPNYKKGKYAFQLVPPKPTLGETLSFNAFDSSEHDEWVVAVEREVARAQIAALAAASGTPAQAAPSVALTNSGRVSSFMRQGSNPDLAFETSQSGDLRRQVSLKGAQRSVHADDDGDSGSSVSSSAPASRKASTSSQFASEEKPYIDLDCTQTVPASSSQQGPVRRTNSVTSSGGDEPSALPVINEPPPSRLTAKRVSVAAVSSLSRALLRRGSNSSIAELPEGGASPRPMRREEPPPVPQRPEDVASSPMDARGGHANDAADGERPAKGDYIYFEDEDLAGNSSGEDEENSKARPFARGESQTSLGRSQPSAHAPLASPRRMRADEFAPISPSPLRKDSAPAAAPTSTRLSQSSGSGLLSASVPGVRNGGGGGGGGGGGAYLEILDDGSPAGNVVTLASSPSPVPIVSPVPPKRQAEAKRTSIGDSFNPYENSPKPVRASVGESSRPNLRLSVDDSKSSGGRAGAASPVPVMRELDYDSVTKAFWYHGPITRELAEERILAGPVGHFLVRASLNGPDTVITVRGVDRPKHYKILWEDGLCHLGEGPRFQNAILLLRHFVSSPLPNAIGSLMLTKACHP* # ORIGINAL: g3691.t1 original gene structure, not modified by PASA NODE_2716_length_5364_cov_42.3373 AUGUSTUS gene 82 306 . + . ID=g3691;Name=g3691.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS mRNA 82 306 . + . ID=g3691.t1;Parent=g3691;Name=g3691.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 82 306 . + . ID=g3691.t1.exon1;Parent=g3691.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 82 306 . + 0 ID=cds.g3691.t1;Parent=g3691.t1 #PROT g3691.t1 g3691 VRAWSIRKGSTAAEAAGAIHTDMMKGFIRAEIYSVSDLVQYKTTSALRTAGKLRSEGKAYIMRENDVAHFLFNV* # ORIGINAL: g3692.t1 original gene structure, not modified by PASA NODE_2716_length_5364_cov_42.3373 AUGUSTUS gene 1078 4375 . - . ID=g3692;Name=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS mRNA 1078 4375 . - . ID=g3692.t1;Parent=g3692;Name=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 4182 4375 . - . ID=g3692.t1.exon1;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 4182 4375 . - 0 ID=cds.g3692.t1;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 3064 3961 . - . ID=g3692.t1.exon2;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 3064 3961 . - 1 ID=cds.g3692.t1;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 2579 2734 . - . ID=g3692.t1.exon3;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 2579 2734 . - 0 ID=cds.g3692.t1;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 1985 2161 . - . ID=g3692.t1.exon4;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 1985 2161 . - 0 ID=cds.g3692.t1;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS exon 1078 1725 . - . ID=g3692.t1.exon5;Parent=g3692.t1 NODE_2716_length_5364_cov_42.3373 AUGUSTUS CDS 1078 1725 . - 0 ID=cds.g3692.t1;Parent=g3692.t1 #PROT g3692.t1 g3692 MTIEASVSPLDAAASHFPTDDVVVILDAGAQYGKVIDRKVRELNVATELMPLDTPASVLKSRKFKAIIISGGPSSVYAADAPKYDPAMLDLGVPILGICYGMQLCNRHFGGTVERKLQREDGQYDIDVETDSPLFAGLGARQPVLLTHGDSVGEIAPGFRAIGRSGELISAIESLEKKIWGVQFHPEVDLSTHGKQMLRNFLFECVGCKGSYTMEDREVTCIREIKQFVGDKKVLVLVSGGVDSTVCAALLSKALGPDRVVALHIDNGFMRLDESSKVETSLAQLGLPLRCIDASETFYNATTTVTEKIPGDASGAKRSRVTGKLKETVAPEDKRKIIGDAFVNVAKAAIEALNLGPDDVYLAQGTLRPDLIESASALASGKADAIKTHHNDTDLVRQLREQGRVIEPLKDYHKDEVRELGKRLGLPEDLVMRQPFPGPGLAVRVICAEEAYITADFDSTNAFLHAIVNVATLQQESETHNQIVRCAGHDADTIVKASGKFSATLLPIKTVGVQGDGRTYSYVCALSDGTSADAADNATAPDWGSLFSLARLIPKLCHNINRVVFVWGSRVEGPLRSVVTTHLTPDVLDTLRLADSAVNHSLLSHDLITRLSQVPVISFPVDFEGSDGHRSIAIRTFITADFMTGVPAVPGREMPFEALAEMVKNVASVPGVSRVVYDLTAKPPGTTEWE* # ORIGINAL: g1593.t1 original gene structure, not modified by PASA NODE_3148_length_4189_cov_38.9524 AUGUSTUS gene 772 2859 . - . ID=g1593;Name=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS mRNA 772 2859 . - . ID=g1593.t1;Parent=g1593;Name=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS exon 2760 2859 . - . ID=g1593.t1.exon1;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS CDS 2760 2859 . - 0 ID=cds.g1593.t1;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS exon 2449 2549 . - . ID=g1593.t1.exon2;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS CDS 2449 2549 . - 2 ID=cds.g1593.t1;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS exon 2222 2349 . - . ID=g1593.t1.exon3;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS CDS 2222 2349 . - 0 ID=cds.g1593.t1;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS exon 1905 1980 . - . ID=g1593.t1.exon4;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS CDS 1905 1980 . - 1 ID=cds.g1593.t1;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS exon 772 1662 . - . ID=g1593.t1.exon5;Parent=g1593.t1 NODE_3148_length_4189_cov_38.9524 AUGUSTUS CDS 772 1662 . - 0 ID=cds.g1593.t1;Parent=g1593.t1 #PROT g1593.t1 g1593 MAGLQPPPALKSIAPFLQRADEFEKRDPITAYYCRYYAAQCAIKEHGTSKDKTVTTFLINLMDKMEVDKKKLGNIEAIKNDLVGQAHVEDFALKLFAFADNKDRAGLADKNVARSFYAASTVFETLKVFGELDSELSEKQRYAKWKAVDITRCLREGVVPKPGPPGGEEDDMDQSGGYGGEDANGQQQQQQQQQQQQSQGLSTRSSINDGSSSSSGAYGGFPQPPQYGQSQPDPYAQAPQPGQGQGHVGPLGGIGGWTYGPNVPHSTPPSFGDEPTPQSNGGANNTNSNRPSSSEGISYGSPYPTYGHQQAQQPQLPPNAQPQTPYPQQQPQYPHDQQNPTVPASRPQQPTRPQPQQQPQPQQPPQHQQQQNFQGFVSPSIAGNGLANPADFPKVQKYCKFAISALEYDDVSTAVVNLQKAMNLLTIGREA* # ORIGINAL: g1404.t1 original gene structure, not modified by PASA NODE_2703_length_5395_cov_45.5992 AUGUSTUS gene 1832 3694 . + . ID=g1404;Name=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS mRNA 1832 3694 . + . ID=g1404.t1;Parent=g1404;Name=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 1832 1993 . + . ID=g1404.t1.exon1;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 1832 1993 . + 0 ID=cds.g1404.t1;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 2237 2318 . + . ID=g1404.t1.exon2;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 2237 2318 . + 0 ID=cds.g1404.t1;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 2443 2665 . + . ID=g1404.t1.exon3;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 2443 2665 . + 2 ID=cds.g1404.t1;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 2787 3063 . + . ID=g1404.t1.exon4;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 2787 3063 . + 1 ID=cds.g1404.t1;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 3266 3694 . + . ID=g1404.t1.exon5;Parent=g1404.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 3266 3694 . + 0 ID=cds.g1404.t1;Parent=g1404.t1 #PROT g1404.t1 g1404 MSHPANALEQLSAIAASSPTRANILAKKSPTSDAKRAGVNRGVVSRPALDTPAQAKRKLDIQEETPKGGRKRLKNEKEEPSEPGSPDKGSSRYDTSLGLLTRKFVNLLKEAPEGILDLNKAADLLQVQKRRIYDITNVLEGIGLIEKKSKNNIHWRGTGSAADTEEVNARADELRDEIADLQDREGKLDGDSRIIQDSLRSLADNQDYVRLAYVTESDIRGIDSFRGHTLIAIRAPSGTRLEVPDPDDGGMDYPARCFQIFLKSSGGPIKVFLLDEDAATGAAGVVDLDELSTDGEGRGHVPPGRPYVPTPTGGASPMRDPFALPFGSARNTPLRLLPGSEDIVDGEAPLALLSPPPGDIEYFYNLEDTEGMADLYDISTYFDDGRDMLT* # ORIGINAL: g1403.t1 original gene structure, not modified by PASA NODE_2703_length_5395_cov_45.5992 AUGUSTUS gene 1 1344 . - . ID=g1403;Name=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS mRNA 1 1344 . - . ID=g1403.t1;Parent=g1403;Name=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 1199 1344 . - . ID=g1403.t1.exon1;Parent=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 1199 1344 . - 0 ID=cds.g1403.t1;Parent=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 606 691 . - . ID=g1403.t1.exon2;Parent=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 606 691 . - 1 ID=cds.g1403.t1;Parent=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS exon 1 293 . - . ID=g1403.t1.exon3;Parent=g1403.t1 NODE_2703_length_5395_cov_45.5992 AUGUSTUS CDS 1 293 . - 2 ID=cds.g1403.t1;Parent=g1403.t1 #PROT g1403.t1 g1403 MDGCGWMDACKKLAADVDGDIGGFVVTVVQMSTLMPVTATKARFDTRP*SLPTITKSAEINTIEFFLFFLNLLGRRQSATMGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKFYVTIIDAPGH # PASA_UPDATE: g1405.t1, single gene model update, valid-1, status:[pasa:asmbl_4861,status:3], valid-1 NODE_2703_length_5395_cov_45.5992 . gene 3982 4980 . - . ID=g1405;Name=g1405.t1 NODE_2703_length_5395_cov_45.5992 . mRNA 3982 4980 . - . ID=g1405.t1;Parent=g1405;Name=g1405.t1 NODE_2703_length_5395_cov_45.5992 . five_prime_UTR 4738 4980 . - . ID=g1405.t1.utr5p1;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . exon 4699 4980 . - . ID=g1405.t1.exon1;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . CDS 4699 4737 . - 0 ID=cds.g1405.t1;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . exon 4423 4585 . - . ID=g1405.t1.exon2;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . CDS 4423 4585 . - 0 ID=cds.g1405.t1;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . exon 3982 4329 . - . ID=g1405.t1.exon3;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . CDS 4052 4329 . - 2 ID=cds.g1405.t1;Parent=g1405.t1 NODE_2703_length_5395_cov_45.5992 . three_prime_UTR 3982 4051 . - . ID=g1405.t1.utr3p1;Parent=g1405.t1 #PROT g1405.t1 g1405 MRLSGPLKAQYAKEHNLNFDKLLDASEYKEHYRKDMIRWGEEKRTSDPSFFCRKATVDATSPVWIISDARRPTDVLYFKEQFGDRCLCVRVEASVDTRTARGFVHTAGIDDADSECALDSWTPWDIILHNENGEKAVLEQDIERLLALVHTKTAVAQDT* # ORIGINAL: g10877.t1 original gene structure, not modified by PASA NODE_1676_length_9840_cov_38.0753 AUGUSTUS gene 7081 8964 . + . ID=g10877;Name=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS mRNA 7081 8964 . + . ID=g10877.t1;Parent=g10877;Name=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 7081 7524 . + . ID=g10877.t1.exon1;Parent=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 7081 7524 . + 0 ID=cds.g10877.t1;Parent=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 7911 7995 . + . ID=g10877.t1.exon2;Parent=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 7911 7995 . + 0 ID=cds.g10877.t1;Parent=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 8456 8964 . + . ID=g10877.t1.exon3;Parent=g10877.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 8456 8964 . + 2 ID=cds.g10877.t1;Parent=g10877.t1 #PROT g10877.t1 g10877 MRSTAITTSLAIISLVSLFAPREMNAVAPMNYTLRVTYIGTSPDGVFQKTASDVLSMAWLEISERTTPLARTLVNNLTIDYVELRTTTSRQSALFAAMSAREQHNASVVIGSDWSAESIVMNLYLSAFNVPQISATSTSVLLSDKTNYPTFMRTCVADNEQGEALAELVNEFHWDTVALLTSDDEYASSLGQDFALAAQKLNITVVATQQFARFAVDISAQIGAIRSSGARIILLSCLEADVLNVFTTASRMGVTGPGYTWLGTDGWSTGNTVALGQSNPTIAAALTGAIAFTPFSGEGTREYEAFLDRKAADKARRPGTHTDYASLSRKLAYSQEPYVYEGEWH* # ORIGINAL: g10876.t1 original gene structure, not modified by PASA NODE_1676_length_9840_cov_38.0753 AUGUSTUS gene 1795 4854 . - . ID=g10876;Name=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS mRNA 1795 4854 . - . ID=g10876.t1;Parent=g10876;Name=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 4646 4854 . - . ID=g10876.t1.exon1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 4646 4854 . - 0 ID=cds.g10876.t1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 3943 4289 . - . ID=g10876.t1.exon2;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 3943 4289 . - 1 ID=cds.g10876.t1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 3520 3588 . - . ID=g10876.t1.exon3;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 3520 3588 . - 2 ID=cds.g10876.t1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 2563 3201 . - . ID=g10876.t1.exon4;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 2563 3201 . - 2 ID=cds.g10876.t1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 2257 2357 . - . ID=g10876.t1.exon5;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 2257 2357 . - 2 ID=cds.g10876.t1;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS exon 1795 1908 . - . ID=g10876.t1.exon6;Parent=g10876.t1 NODE_1676_length_9840_cov_38.0753 AUGUSTUS CDS 1795 1908 . - 0 ID=cds.g10876.t1;Parent=g10876.t1 #PROT g10876.t1 g10876 MADAETISRLVAEQVAKAMKVKEAELEEKFNRRLEDRFEKAAREENRFPEGRTDITDYWMDKTTAHGLNRAFFKDRSSFTRVTWTILFLGAMGVCGWLLGELIKDYLSYGTQTSYKVEYSRSLDFPAIMICNVNVASKSKMEAANYTGFTQDIDDIYPDIEFDEMATKYGQPIEDFLQFCMYNEQECTAANFTKILDPTFGQCYAFNTGDTGPLVKTGKPGFRYGLQLALDIQQYDYLPATETAGIVVEPYSQDKPPSPDVQGVFIPPGVYSRVSMRKRTIINKKAPYGDCLDQNDFTGGKRYSVSTCLSSCRDAEILRRCGCTPAFSIINGPPNSTCTPKTNDDHYYCMDDVQYDFTTDALVCNCPRPCYEDVILTSSSTLYYPADPAADAEFQQYQTTKAEWQANWLRLDIYYEQLNYEIIEQTPANTPQALIGNIGGNLGLFVGASWLTVFEVFEYIFWLSRDKYRRNRANKVSPEGIEMHQPVGEVTV* # ORIGINAL: g13935.t1 original gene structure, not modified by PASA NODE_3096_length_4333_cov_38.4331 AUGUSTUS gene 303 4194 . + . ID=g13935;Name=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS mRNA 303 4194 . + . ID=g13935.t1;Parent=g13935;Name=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 303 735 . + . ID=g13935.t1.exon1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 303 735 . + 1 ID=cds.g13935.t1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 1071 1252 . + . ID=g13935.t1.exon2;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 1071 1252 . + 0 ID=cds.g13935.t1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 1561 3121 . + . ID=g13935.t1.exon3;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 1561 3121 . + 1 ID=cds.g13935.t1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 3616 3702 . + . ID=g13935.t1.exon4;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 3616 3702 . + 0 ID=cds.g13935.t1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 3888 4046 . + . ID=g13935.t1.exon5;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 3888 4046 . + 0 ID=cds.g13935.t1;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS exon 4153 4194 . + . ID=g13935.t1.exon6;Parent=g13935.t1 NODE_3096_length_4333_cov_38.4331 AUGUSTUS CDS 4153 4194 . + 0 ID=cds.g13935.t1;Parent=g13935.t1 #PROT g13935.t1 g13935 VDSPFEFVNSVDAFDRMCDSLSKTSLFAFDAEFHTEHSYRGFTCLVQFTCADGKDYIVDALVLREHMHRLLGPFTDKKITKIGHGCKDDVIFLQRDFGIYIVNLFDTHVAAEVLGLQGSLSLKSLLEHYVGYSKRDEYQRADWRIRPLSEHMLYYARGDTHFLPHLYMRMRNELIEKAPDALSTALDRSLQVCRSQWKPKGEVMGIAKTSGLQQYLSEQHLPSPNPRQFTALKLLSLWRDANARRLDESPSAVMPKDVLFDISLGLPCDSDAVVRMFGGYSKAIALRYVREIVEIVRRAIDECDVSELAGDNACGRDSLDHACAAVHPVQSAVTAAAVTSSSPIFAGVTNPIRPAHTLAVTIPLPALFSKQPVQDYTLYYQQLTKVQSSPFSEPTWEDSSWMAKVPLPPQLVGHVRGSTARSAEGIDEGVVIAFGISKKIAKENCAKKAIERLYKMFYGTSINAGGAVNAHDTHAPRGVESTATHNAMREWDGHVIVRPLLPSPNAPESEWRDGDSEDVYYASAILPYREFFKRVRGTEVGVQIDRRGPPHLPKFFAQACFSVTVGTEPSFDVIARAFAATKQRAERVAMSIACSELHARGLVDLPPDFPQQLLHPRASTMSLAGADGSRMHVDGNTYNSSTQKRGRDDDSGDVEGGEKRRRVDENASTPVAMVTHGLRSEERRALPPVPSVSASAISNGRLDSFASIVDSLPSHVEPNPQESPAIARESDEPLSCDAGGTMYAYLVDFGIRIPQHEYAHLDGVFFDGFVALSRRPIPTMSPFTVQPIGGKIKKEPGIVQLTPIGVVRKVDVSGGMVSYL* # ORIGINAL: g2485.t1 original gene structure, not modified by PASA NODE_3948_length_2475_cov_71.3304_potentialcontaminant AUGUSTUS gene 866 1801 . - . ID=g2485;Name=g2485.t1 NODE_3948_length_2475_cov_71.3304_potentialcontaminant AUGUSTUS mRNA 866 1801 . - . ID=g2485.t1;Parent=g2485;Name=g2485.t1 NODE_3948_length_2475_cov_71.3304_potentialcontaminant AUGUSTUS exon 866 1801 . - . ID=g2485.t1.exon1;Parent=g2485.t1 NODE_3948_length_2475_cov_71.3304_potentialcontaminant AUGUSTUS CDS 866 1801 . - 0 ID=cds.g2485.t1;Parent=g2485.t1 #PROT g2485.t1 g2485 MNLKDILAEERAAQENALKDALADERAAHNMLRKIYADPDNVAVDDRETVEVSKQAPDSQLANALKRIDELERVVREIKEVLVMERAAREAAEKRYDMERAARKAAEKRYDMERHELVQRVLDAEKELANVHKAVLFLVHPETHGDKAKVDELNTHVDMYRVAYKDILGLYIIPVEISSRGTIVKCHRELPSGSVKAVVVCGQLSLLIAAPDWISLLKKFASDQFPPIIFGLRSDIEQTLDHTFLQNIRRALTANFVFYDKRYYTDDLLAKTLEDSVRAAGVIEVGSYYLQQIDDIERSRIPFCRSNTYLM* # ORIGINAL: g8311.t1 original gene structure, not modified by PASA NODE_2153_length_7483_cov_34.1805 AUGUSTUS gene 6504 7427 . + . ID=g8311;Name=g8311.t1 NODE_2153_length_7483_cov_34.1805 AUGUSTUS mRNA 6504 7427 . + . ID=g8311.t1;Parent=g8311;Name=g8311.t1 NODE_2153_length_7483_cov_34.1805 AUGUSTUS exon 6504 6637 . + . ID=g8311.t1.exon1;Parent=g8311.t1 NODE_2153_length_7483_cov_34.1805 AUGUSTUS CDS 6504 6637 . + 0 ID=cds.g8311.t1;Parent=g8311.t1 NODE_2153_length_7483_cov_34.1805 AUGUSTUS exon 6890 7427 . + . ID=g8311.t1.exon2;Parent=g8311.t1 NODE_2153_length_7483_cov_34.1805 AUGUSTUS CDS 6890 7427 . + 1 ID=cds.g8311.t1;Parent=g8311.t1 #PROT g8311.t1 g8311 MVAPSIASDFWSLFNNDSVAAVQLVEREVQSAAAALGNDYSLDARVSRLLHVVRSHIRLTAPSWLGEALLVACRRSLEAHVLSARGESDDDDDEDPQNASSVGDAPLDSTHMCLLARGLATLGMGGAVRVAASTAAMAAIGDHIRVKAEGNFTSRVRRRLLEWVRRGVIAWMEALVCALDGRTEGGGGMLGYGLEQVTWVVHQRSAGVAPMGCTGDVVQVILS* # PASA_UPDATE: g8310.t1, single gene model update, valid-1, status:[pasa:asmbl_3633,status:12], valid-1 NODE_2153_length_7483_cov_34.1805 . gene 1894 5087 . - . ID=g8310;Name=g8310.t1 NODE_2153_length_7483_cov_34.1805 . mRNA 1894 5087 . - . ID=g8310.t1;Parent=g8310;Name=g8310.t1 NODE_2153_length_7483_cov_34.1805 . exon 4785 5087 . - . ID=g8310.t1.exon1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . CDS 4785 5087 . - 0 ID=cds.g8310.t1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . exon 4131 4250 . - . ID=g8310.t1.exon2;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . CDS 4131 4250 . - 0 ID=cds.g8310.t1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . exon 3677 3793 . - . ID=g8310.t1.exon3;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . CDS 3677 3793 . - 0 ID=cds.g8310.t1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . exon 3174 3377 . - . ID=g8310.t1.exon4;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . CDS 3174 3377 . - 0 ID=cds.g8310.t1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . exon 1894 2950 . - . ID=g8310.t1.exon5;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . CDS 2213 2950 . - 0 ID=cds.g8310.t1;Parent=g8310.t1 NODE_2153_length_7483_cov_34.1805 . three_prime_UTR 1894 2212 . - . ID=g8310.t1.utr3p1;Parent=g8310.t1 #PROT g8310.t1 g8310 MATPPLKVPRLADAHVPHTLHGNSALAAVASNGTASAIIDDDALQRSLDALDAVQEGLERLNEQASEEILKVERLYNSLRRPHYGKRSELIRKIPDFWLTCFLNNDLLHGLLSDADVDVFHYLESIDVEEFDDVKSYKILFSFAPKNPYFDNDVLIKEYLVDDNGDLTTKSTPIRWRPGMDVTADIDGTSENAVAPENPRKRRRQTGESFFKWFVGGHVGGHVGVDSEIGEIIKEHLWPNPLQHYNNKMADYSDDNVREDEEHGMDDGGDPEDEDADADADADAFANAVGEGAGEGEGDAANEGEYNQSEDAQDEAYGAVEGGAAEDNAYDVASDHALEVEEGDAEEGIDGEEVAGAVDEGVEEYEAGDEAGDDASAAVDEGVVPGDGGGNSGDGDDAYGVDDGGAGVAVAEHGRGDNGDGDGGGDQGGDEMDQPFEGEEEDDGEGEGEGEGEEGEDDAYAADAVAPDGEDIGDVGDVGEYAGDDEPDDTYRS* # ORIGINAL: g7940.t1 original gene structure, not modified by PASA NODE_4492_length_1545_cov_42.6007 AUGUSTUS gene 98 1401 . - . ID=g7940;Name=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS mRNA 98 1401 . - . ID=g7940.t1;Parent=g7940;Name=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS exon 1050 1401 . - . ID=g7940.t1.exon1;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS CDS 1050 1401 . - 0 ID=cds.g7940.t1;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS exon 710 882 . - . ID=g7940.t1.exon2;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS CDS 710 882 . - 2 ID=cds.g7940.t1;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS exon 439 546 . - . ID=g7940.t1.exon3;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS CDS 439 546 . - 0 ID=cds.g7940.t1;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS exon 98 191 . - . ID=g7940.t1.exon4;Parent=g7940.t1 NODE_4492_length_1545_cov_42.6007 AUGUSTUS CDS 98 191 . - 0 ID=cds.g7940.t1;Parent=g7940.t1 #PROT g7940.t1 g7940 MSRRQSIENGLADSKPDAKKFGSKGDLLSSDRASRPTSRNVAVKRESNAKVIDDDVVIDGSVTNAAGLASAMMAHLNVEDRVDVVAEDTMEETKSESDESESDVPEEEDWETDLEIEDERKVDDLSGRSVYLRSCRKLGIVPVSYFLKNLDQDVMKMKHHGLGPLGAKAIADALMVNTSVTMLDLTDNWIEDEGGYAIAEMLKENTTIAHVDLSENRIGARAAQSIAEMLDNNISLKVLSLR # ORIGINAL: g755.t1 original gene structure, not modified by PASA NODE_1275_length_12498_cov_45.1822 AUGUSTUS gene 3686 8920 . + . ID=g755;Name=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS mRNA 3686 8920 . + . ID=g755.t1;Parent=g755;Name=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 3686 3755 . + . ID=g755.t1.exon1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 3686 3755 . + 0 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 3996 4132 . + . ID=g755.t1.exon2;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 3996 4132 . + 2 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 4588 4732 . + . ID=g755.t1.exon3;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 4588 4732 . + 0 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 4945 5384 . + . ID=g755.t1.exon4;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 4945 5384 . + 2 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 5512 6374 . + . ID=g755.t1.exon5;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 5512 6374 . + 0 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 6671 7430 . + . ID=g755.t1.exon6;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 6671 7430 . + 1 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 7679 8354 . + . ID=g755.t1.exon7;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 7679 8354 . + 0 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 8498 8661 . + . ID=g755.t1.exon8;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 8498 8661 . + 2 ID=cds.g755.t1;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS exon 8834 8920 . + . ID=g755.t1.exon9;Parent=g755.t1 NODE_1275_length_12498_cov_45.1822 AUGUSTUS CDS 8834 8920 . + 0 ID=cds.g755.t1;Parent=g755.t1 #PROT g755.t1 g755 MGLSLAISVRVIVLVAWVALAYAGCTSYKSFETCVGAKDPDTGTKFCAWCLPTTGGIAFCAPETDETQQQSKCAGGYVGYSIKGTDGRSYSNSASHDPVTSAGSELSLVKISLALRPGETSKNFTVTLTPNPCKGVDLYYLMDVTGSMRDDQSSLKDLAKNLTSAPQQLCADISYGCNDSQCGRIGFGTFIDKPVGPIGYWAAAQPANKVEYGDVKGLPLAPSQRSSAPFNYVFKNVFALTNSSTVSKGTQLINFQNTIGDEKLIAENIDYPEASLEALVQAAVCDTEVGWRASNSVRRIIFLATDADPHIAGDGLKAGIFKPNDLTCSLRGTTEVGAGNKTIDRDYPSLGQVADVLIGRNIFPIFASPRNKVPGSQFEREAPNEIVYPSILSVLSFGSKVELTSTSNNVIPAIREGYDRILKDVSIRVSADDVDFTITPDSSTLQWNQPTTYTITATLRNNAQRGPLRSTVATPVGFESFGINLITQLEYEECTRSNLPNFFNMMCQNGGTVSCGRCICPTNFTGDYCECSTDKSNCLENGLECSNKGDCLAQGQECGGSLSGKCGCDGVCECFNGRTGPACECSGKSTCTTDAECVNGKCLTNPSCPSFKNCECALGYKLSADNTCTVKVYSCPFGLNGLACSGNGLDDCQSNGTCNCAGFYKTVDINDPCACDSDPKACTNGCSGHGECVCGECECSESYTPVDNQDPKTYDCSCSNAPCPDDCSGHGYCDCGKCKCSWNYIGANCSDYCPNKYLSVDKKVTKEALGCKEDFDSECGVCKCVQNDGPTCSCSKKECPTENAKDCSGHGSCLCGECQCDAGWGGPSCGCDQSLKCPVDSNGTECGGPSNGRCVMGEYDAFFQLQCGVCECTANFTGASCNCSTSECPRSDEEGRPECGSQGECRCGKCVCNTNYQLDNNGVCPQRCDGSKTCPKTNGVVCNGHGTCECGVCNCDAKWDGLGCEVCKDISCYDCAPYSLCSDCAQQNDFCQFCATEDANTGAIVSSKCIKANEDSSQCSVTYKAYTDCQVGSSSGGISTKTKIGVGAGVGAGLACAGVAGIVGFKLVQRHLDKKEWERFEKERQRSEWKSDQNPLYQSSVRETENPLYVGRE* # PASA_UPDATE: g754.t1, single gene model update, valid-1, status:[pasa:asmbl_1047,status:12], valid-1 NODE_1275_length_12498_cov_45.1822 . gene 236 3131 . - . ID=g754;Name=g754.t1 NODE_1275_length_12498_cov_45.1822 . mRNA 236 3131 . - . ID=g754.t1;Parent=g754;Name=g754.t1 NODE_1275_length_12498_cov_45.1822 . exon 2932 3131 . - . ID=g754.t1.exon1;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . CDS 2932 3131 . - 0 ID=cds.g754.t1;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . exon 2474 2609 . - . ID=g754.t1.exon2;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . CDS 2474 2609 . - 1 ID=cds.g754.t1;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . exon 2199 2340 . - . ID=g754.t1.exon3;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . CDS 2199 2340 . - 0 ID=cds.g754.t1;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . exon 236 2037 . - . ID=g754.t1.exon4;Parent=g754.t1 NODE_1275_length_12498_cov_45.1822 . CDS 236 2037 . - 2 ID=cds.g754.t1;Parent=g754.t1;3_prime_partial=true #PROT g754.t1 g754 MAVARFTRALAIVAVAVVMAALWPNAGAQRFRASDNATLYSPSKYTFKGEGTNAEAFGFSIAYDITGFLAVGAPLFNGPIKTDFTSRESAGRVYVFPSFRSGTTASRKTHENTECNYRGFFGSTVSILDSTASSYNVLASAPGCTTDMNAVPVYAPTGTGGDLEVNWGSACSSVKDGTFRAILEEGALSVVTTIPPYRKNLKIGLSTTSSTDTYSIPPDMDLYLEDADPSLSSSHRTNNGISFSTTNRVRLLGFEPSLDFASVNVTVSPGVYMTTKMTGTANKPYTLCKYCDSPPGEYETDLCPSDALTYAGVSLYYGGHFCSRKCTLPFRTDEIIVSIVIGLDDNGGSTTMLTITVLTREGISLYTSNFDGTNPGDVVVLTHNPSAFWSDAGSVPYSVRIRNTGGDDVQINYVELSVRSSATVYGFDFGHQWISSNTITVSGATYTLPFSSMNSARAFTTEMVVFSMKTVDETDGETSNIIDITLSSSTGSQILKIKVVPAGRGRTRVVVKPLPTRLSGSGTRLGNLKLAATGTDRFKVGDVSVIVRSLGKYNYPISGYLSLDEYGDWAYKSFTASAPWPGNPYTPVDQSGDLVTVSIVTRKPSSSMAGKVLVTVTSTSGMTVSVSIGGTTPGMLSSVTVPTSARWGTEYLARVDIATSFTNETWSGTLVEVYPRSSTLLFGIQIPKDITFTSKGASLVLDSSSELKDYTSAYIGGTTRVLPCRGSSESIEMTGTTNKVYQLIMNGFAAGVGDATYSFD # PASA_UPDATE: g756.t1, single gene model update, valid-1, status:[pasa:asmbl_1046,status:12], valid-1 NODE_1275_length_12498_cov_45.1822 . gene 9296 12494 . - . ID=g756;Name=g756.t1 NODE_1275_length_12498_cov_45.1822 . mRNA 9296 12494 . - . ID=g756.t1;Parent=g756;Name=g756.t1 NODE_1275_length_12498_cov_45.1822 . five_prime_UTR 12468 12494 . - . ID=g756.t1.utr5p1;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . exon 10115 12494 . - . ID=g756.t1.exon1;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . CDS 10115 12467 . - 0 ID=cds.g756.t1;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . exon 9811 9971 . - . ID=g756.t1.exon2;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . CDS 9811 9971 . - 2 ID=cds.g756.t1;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . exon 9296 9608 . - . ID=g756.t1.exon3;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . CDS 9525 9608 . - 0 ID=cds.g756.t1;Parent=g756.t1 NODE_1275_length_12498_cov_45.1822 . three_prime_UTR 9296 9524 . - . ID=g756.t1.utr3p1;Parent=g756.t1 #PROT g756.t1 g756 MIFLVTDADPHMAGDGTKAGLYKRNTATCYVPDSTTDAAGIIAAMDAASITQDYPSVGQLADVLLSSNVFPIFAYPRSTVPASVDTFENINDNVFPSITNTLGFGSTITLKRPVSQDDTSNVVNAVVDAFNTVLKNVRLNVLPVDGYVTATLPAPVNLGFGTKSTLNFQLSYDGTNPVSRRAVYTASPVGYESAQITVSTLPYYSQCNTTNAPNFFVLNCNGRGTNVCGRCVCNAPYSGPKCECDESTTNCVSNGLTCSGHGKCNCNQCACEPDAFYVYDGAKCDCARIPCRDNCNGNGVCGCGGICTCNSGFTGAACECRTGASICQVGDSLCVHGTCVAGECSQNKCACSVGYTNDAKTGLCTVEVKTCPIGPNGLVCSGNGNCNTTTGLCECTAPFSSTASNPACSCNTDSSICPNGCSGHGSCVCGVCVCEAGYKADVDSPSYDCSCPRAACKDDCNGHGSCVCGKCVCSKGYRGDFCDDYCPATGKTCAQLNCDTTGKTIDRTGKVLYNYCDEECGICRCVTGEGDDCRCSTDDCPSINAKACSGHGSCNCAQCTCDAGWASPSTGCGCNTTKACPADNEDGAPDFCGANKGRGRCVYGELDDYLNVVCAKCECSADAAGNPLWSGDNCNCSTVACQTSDEPGNPQCGAKGECNCGKCKCKDGFLKDAAGNCLERCTVAAQSNCKNNGDTQACSGRGNCTCGECKCPWPWAGEFCEICTDESCYDCTAKTLCSDCAQQQFCAWCGTNNVGGSPTGVCIKRIAQSSMKCDFNYTSYGLCTTGSSGGISTTTKIGVGAGVGAGLACAGVAGILGFKLYQRAMDKKEWEKFEKERQRSEWKSDQNPLYQSSVRETENPLYVGR* # ORIGINAL: g13122.t1 original gene structure, not modified by PASA NODE_531_length_21660_cov_41.5507 AUGUSTUS gene 11097 15556 . + . ID=g13122;Name=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS mRNA 11097 15556 . + . ID=g13122.t1;Parent=g13122;Name=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 11097 11301 . + . ID=g13122.t1.exon1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 11097 11301 . + 0 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 11501 11587 . + . ID=g13122.t1.exon2;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 11501 11587 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 11802 12242 . + . ID=g13122.t1.exon3;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 11802 12242 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 12415 12498 . + . ID=g13122.t1.exon4;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 12415 12498 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 12935 13000 . + . ID=g13122.t1.exon5;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 12935 13000 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 13287 13392 . + . ID=g13122.t1.exon6;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 13287 13392 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 13614 13668 . + . ID=g13122.t1.exon7;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 13614 13668 . + 1 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 13838 13914 . + . ID=g13122.t1.exon8;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 13838 13914 . + 0 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 14231 14328 . + . ID=g13122.t1.exon9;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 14231 14328 . + 1 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 14545 14721 . + . ID=g13122.t1.exon10;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 14545 14721 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 15059 15164 . + . ID=g13122.t1.exon11;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 15059 15164 . + 2 ID=cds.g13122.t1;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 15442 15556 . + . ID=g13122.t1.exon12;Parent=g13122.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 15442 15556 . + 1 ID=cds.g13122.t1;Parent=g13122.t1 #PROT g13122.t1 g13122 MARPDVRMRGEQRTVACCVSVAVVVALCGAWIGSASAAVIPPNCLVVFDTTGPWGHLGQLYGMMVANLCGMNTPAGYGTHSAKPVSQYAAGDINKNAVTFYIGSTYDEPLPAAFITDIASAQKPIVMLGNNVWQVVNSMGATAFFNKFGFVPYIFDASTITSVLYKGYPLARSALNGNGIMTYSNINATKATTVGECVRADGTKFPYAIRGGMLTYFGEIPMSYIDERSNYLVFVDQMFEWMNPGVVPRRRALLRLEDVGPTADPQQLRSVADYLFSKNIPFSFGVFPYYRDPLGKENNGVPTELRLRNAPSVVSALKYMISKGGTMVSHGYTHQYNSVLNPYNAVSADDFEFFRAHIDASNNVVYDGPMAEDSVSFTTSRLTGIVNEFKACSLAVPSIFEFPHYAGSALDYKTVLANGFPRRYERSLYFNGVLTNTAIDSTKYVGQFFPYPVKDVYGAIVIPENCANYEPEAFNNHPPRLARDIVENARANLVVRDSFASFFYHPYYYDGTYTSTALKDIVNGILALNYTFVAATSL* # PASA_UPDATE: g13121.t1, single gene model update, valid-1, status:[pasa:asmbl_7998,status:3], valid-1 NODE_531_length_21660_cov_41.5507 . gene 6263 9863 . + . ID=g13121;Name=g13121.t1 NODE_531_length_21660_cov_41.5507 . mRNA 6263 9863 . + . ID=g13121.t1;Parent=g13121;Name=g13121.t1 NODE_531_length_21660_cov_41.5507 . five_prime_UTR 6263 6386 . + . ID=g13121.t1.utr5p1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 6263 6407 . + . ID=g13121.t1.exon1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 6387 6407 . + 0 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 6723 6876 . + . ID=g13121.t1.exon2;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 6723 6876 . + 0 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 7110 7342 . + . ID=g13121.t1.exon3;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 7110 7342 . + 2 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 7579 7631 . + . ID=g13121.t1.exon4;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 7579 7631 . + 0 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 7808 7979 . + . ID=g13121.t1.exon5;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 7808 7979 . + 1 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 8280 8731 . + . ID=g13121.t1.exon6;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 8280 8731 . + 0 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 8858 9204 . + . ID=g13121.t1.exon7;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 8858 9204 . + 1 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . exon 9410 9863 . + . ID=g13121.t1.exon8;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . CDS 9410 9624 . + 2 ID=cds.g13121.t1;Parent=g13121.t1 NODE_531_length_21660_cov_41.5507 . three_prime_UTR 9625 9863 . + . ID=g13121.t1.utr3p1;Parent=g13121.t1 #PROT g13121.t1 g13121 MASQTMMQPQIILLKEGTDTSQGKPQLISNINACAAVVDTVRTTLGPRGMDKLVVDQGGRVTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVMLAGEFLKEAKPFIEESVHPQTIIRSFRLATSLAVAKIREISVKINMKDAVERRSLLEKCAATAMNSKLIAHQKEFFSKMVVDAVMLLDEDLPLNMIGTKRVQGGGLEDTLLVAGVAFKKTFSYAGFEMQPKKYVEPKIALLNIELELKAERENAEIRVDNVQEYQSIVDAEWQILYTKLEKIHASGAKVVLSKLPIGDVATQFFADRDVFCAGRVPEDDLKRTMKACGGAIQTSVNGLTSDILGSCALFEESQIGGDRYNFFTGCPAAKTCTMIIRGGAEQFIAETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLREYSRTIAGKSQLIIGGFAKALEVIPRQLCDNAGFDSTNVLNKLRHKHAQKDGSGRWFGVDVLSEDIADNYIATVWEPALVKINAITAASEAACLILSVDETVKNPQAQEGGGARGRGRGRPR* # ORIGINAL: g13119.t1 original gene structure, not modified by PASA NODE_531_length_21660_cov_41.5507 AUGUSTUS gene 70 4591 . + . ID=g13119;Name=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS mRNA 70 4591 . + . ID=g13119.t1;Parent=g13119;Name=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 70 132 . + . ID=g13119.t1.exon1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 70 132 . + 0 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 298 420 . + . ID=g13119.t1.exon2;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 298 420 . + 0 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 656 763 . + . ID=g13119.t1.exon3;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 656 763 . + 0 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 1079 1236 . + . ID=g13119.t1.exon4;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 1079 1236 . + 0 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 1428 1712 . + . ID=g13119.t1.exon5;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 1428 1712 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 1863 2018 . + . ID=g13119.t1.exon6;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 1863 2018 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 2246 2611 . + . ID=g13119.t1.exon7;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 2246 2611 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 2832 3218 . + . ID=g13119.t1.exon8;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 2832 3218 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 3466 3681 . + . ID=g13119.t1.exon9;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 3466 3681 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 3833 4174 . + . ID=g13119.t1.exon10;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 3833 4174 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 4480 4591 . + . ID=g13119.t1.exon11;Parent=g13119.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 4480 4591 . + 1 ID=cds.g13119.t1;Parent=g13119.t1 #PROT g13119.t1 g13119 VLPTHIPLPVLFSESELQMLQNEKVAQDARVERRKLVQTHENMQSIIETLLRGHENQADASLDMFLWASSIVSSRALTMWGTRYLVPFADMFNYRPQRALRDQDNGSNFLKHHRIEGTLGSPQRRFEVSSDRRCREGDQLFEDYGDSKNDIFITYHGFASADNPFECAEVRLPSMTSSLSANGSASYPAFADKKALLEAIGFRVPAAACFRPLSIGNVVVLRFVKLLVATEEQFKGCKADLSKGDVSLTPIDTCCPECTPNAYTELRALLRKTTAEKYPTTLQQDAALLADTQSDNIRTALNYRIAQKTIAKRVGAKLYALADRSKEQLRGDASQASDGAGSSNGSGKKSNSDITNSGNHVRRTAYELACVDGNELDTAVAEFNRWMDAMSFPVKKISVQRSARMRLSTVATTDISVGELYLAVPAAAILDIAYGQREPSMAALITQIDRDKTLRGDQGEKLAAILIREYFYNADSPFLPYLRLLPRPDAMEVPLFWPREEVADLLRGSVVASDCAMYSADVQRNAQVMSSLAASHPQAFPEGTFTIERYKWAKAIIDSRTIWWESRRQLVPMLDFINCRSCRRIHSTKYDHTMKAAVTLAGDDFAAGGELFEDYGQANNVYFQYHGFVLDPNPHDCVRVQLRIPSVHPDHISAPDYEAHALSLARTRGCGSQQHITCLPPDRIPDRMLCYARAVLLLADDTAANNARAVTWIARQIEAKLAEYTTTVDKDRELIAGGSLSRRAVAMVQMRLSEKIILTTALENIRSRATA* # ORIGINAL: g13123.t1 original gene structure, not modified by PASA NODE_531_length_21660_cov_41.5507 AUGUSTUS gene 16008 17363 . + . ID=g13123;Name=g13123.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS mRNA 16008 17363 . + . ID=g13123.t1;Parent=g13123;Name=g13123.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 16008 17067 . + . ID=g13123.t1.exon1;Parent=g13123.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 16008 17067 . + 0 ID=cds.g13123.t1;Parent=g13123.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 17242 17363 . + . ID=g13123.t1.exon2;Parent=g13123.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 17242 17363 . + 2 ID=cds.g13123.t1;Parent=g13123.t1 #PROT g13123.t1 g13123 MAGFEVKTVFLGLLPAILSMLIGQPLGLDIAVFLLTMFLIYLTLNKPEELYAASKLKRAELATPQLGIAHDSGLPNAESAYMREAGMRGDVLSGDRAQSVGPGRHASSRDKDRWQSRRKTSGSSGNYDECSPDYDFDDALHGHAEPDCTAPHAHTRGGPECRCDAPQQLNSSSSAAHVPAPMAAQVPFVPSAAHASYDDCERLRGELRSLQRRAVLMSLLSPAIGGGIIHYMSLLSKGLLMSMLDPTYFAIAASIRPVLMLMEYWKGRADDIHEELAVPVVLGSVAGDVAAMRAHVAQIEGQLEALRGEFDLSMGKVTRIVSNSHHTVRSAQEEAARRLELLEERIAREKSEQGRSLILQQPRDLSWGALLTWEPVSTKAWRLAWLLIKAVLH* # PASA_UPDATE: g13120.t1, single gene model update, valid-1, status:[pasa:asmbl_8000,status:3], valid-1 NODE_531_length_21660_cov_41.5507 . gene 4703 5686 . - . ID=g13120;Name=g13120.t1 NODE_531_length_21660_cov_41.5507 . mRNA 4703 5686 . - . ID=g13120.t1;Parent=g13120;Name=g13120.t1 NODE_531_length_21660_cov_41.5507 . five_prime_UTR 5651 5686 . - . ID=g13120.t1.utr5p1;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . exon 5612 5686 . - . ID=g13120.t1.exon1;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . CDS 5612 5650 . - 0 ID=cds.g13120.t1;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . exon 5142 5454 . - . ID=g13120.t1.exon2;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . CDS 5142 5454 . - 0 ID=cds.g13120.t1;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . exon 4703 4990 . - . ID=g13120.t1.exon3;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . CDS 4911 4990 . - 2 ID=cds.g13120.t1;Parent=g13120.t1 NODE_531_length_21660_cov_41.5507 . three_prime_UTR 4703 4910 . - . ID=g13120.t1.utr3p1;Parent=g13120.t1 #PROT g13120.t1 g13120 MEDFDVSSKQDLEQFESAYNEELMAEQGASPNTKFNYAFCLVRSPHRDDISFGLQLLSELGRLPEYQRDFMFYSALGCYRLHDYVAAKNFLEGLLSLEPHNRQAISLKKKVEVHITKDGLIGLAIIGGVAAVAGLVGALVLKR* # ORIGINAL: g13125.t1 original gene structure, not modified by PASA NODE_531_length_21660_cov_41.5507 AUGUSTUS gene 18479 20053 . + . ID=g13125;Name=g13125.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS mRNA 18479 20053 . + . ID=g13125.t1;Parent=g13125;Name=g13125.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS exon 18479 20053 . + . ID=g13125.t1.exon1;Parent=g13125.t1 NODE_531_length_21660_cov_41.5507 AUGUSTUS CDS 18479 20053 . + 0 ID=cds.g13125.t1;Parent=g13125.t1 #PROT g13125.t1 g13125 MTKRSHGRRGHGGGSRNTLTAHGRSTECKASADAHHRGSDAATATPQRLPELMRGAADTVADALSGLVGALSIAGGVGGAVGHAQDACATVSLGATSRNDPINSSVQGKAARDWTSGKTADNRARRQPTASVVANDTDDVFVHSSAHSAVDLRRSDEEEGDADADTEGDAGGARTDIASKTADSSVQQRRPRPRHCDVVNWNVGDVRTELRRLGLDPNGSAMVVRKRLKTALRYQLQAGSASVSGSASGANVTGPAPPLTGAAGSKGRRGVSGKATLPFTCAPQSFDVFCVLDYEATCEVDVEFDTYDHEIIEIPVVLVNARTLQVEAEFHTYCRPVLHPTLTEFCVSLTGIAQSVVDAAPLFADAVAQLEAWMAAQRLCFGSDVPDDHHLRWDADMHNNGRCSSGSASGARMSTHSTTTPVSPPEWRRCVFVTDGPWDFRNFLRRQCAMVGMPIPPYARRWVNLRKQFCNYYGKGGGISSMLKHLGMAFVGCEHSGIDDARNIASILVKMTCDGCKIVPNETI* # PASA_UPDATE: g13124.t1, single gene model update, valid-1, status:[pasa:asmbl_8001,status:12], valid-1 NODE_531_length_21660_cov_41.5507 . gene 17552 18196 . - . ID=g13124;Name=g13124.t1 NODE_531_length_21660_cov_41.5507 . mRNA 17552 18196 . - . ID=g13124.t1;Parent=g13124;Name=g13124.t1 NODE_531_length_21660_cov_41.5507 . five_prime_UTR 18151 18196 . - . ID=g13124.t1.utr5p1;Parent=g13124.t1 NODE_531_length_21660_cov_41.5507 . exon 18037 18196 . - . ID=g13124.t1.exon1;Parent=g13124.t1 NODE_531_length_21660_cov_41.5507 . CDS 18037 18150 . - 0 ID=cds.g13124.t1;Parent=g13124.t1 NODE_531_length_21660_cov_41.5507 . exon 17552 17900 . - . ID=g13124.t1.exon2;Parent=g13124.t1 NODE_531_length_21660_cov_41.5507 . CDS 17628 17900 . - 0 ID=cds.g13124.t1;Parent=g13124.t1 NODE_531_length_21660_cov_41.5507 . three_prime_UTR 17552 17627 . - . ID=g13124.t1.utr3p1;Parent=g13124.t1 #PROT g13124.t1 g13124 MDKVQRFLQSKRFAVVGASNDRAKFGNIVLRHYLAKNKEAIAVHPTEAVVEGRPAVPSVSCLVDAQSYAVSIVTPPAVTERVVKEAIAVGIRRIWMQPGAESAQAVKFAEDAGADVIYGGACVLVTPF* # PASA_UPDATE: g13126.t1, single gene model update, valid-1, status:[pasa:asmbl_8002,status:12], valid-1 NODE_531_length_21660_cov_41.5507 . gene 20744 21634 . - . ID=g13126;Name=g13126.t1 NODE_531_length_21660_cov_41.5507 . mRNA 20744 21634 . - . ID=g13126.t1;Parent=g13126;Name=g13126.t1 NODE_531_length_21660_cov_41.5507 . five_prime_UTR 21628 21634 . - . ID=g13126.t1.utr5p1;Parent=g13126.t1 NODE_531_length_21660_cov_41.5507 . exon 21242 21634 . - . ID=g13126.t1.exon1;Parent=g13126.t1 NODE_531_length_21660_cov_41.5507 . CDS 21242 21627 . - 0 ID=cds.g13126.t1;Parent=g13126.t1 NODE_531_length_21660_cov_41.5507 . exon 20744 20983 . - . ID=g13126.t1.exon2;Parent=g13126.t1 NODE_531_length_21660_cov_41.5507 . CDS 20842 20983 . - 1 ID=cds.g13126.t1;Parent=g13126.t1 NODE_531_length_21660_cov_41.5507 . three_prime_UTR 20744 20841 . - . ID=g13126.t1.utr3p1;Parent=g13126.t1 #PROT g13126.t1 g13126 MPGSNSTFGVVWQLFANPSYWLTVLLVIVLALLPAWVQKHVARDSYPLPSQLVREQIAFGIPPFGSHTTATYDASLKRSCPRNRTSSQGRWGICVGRTRAHESPVPVRAARSDAAAAKLGGDAEASLRRRASVVQAVELVPIHHHHQHDQGIHSATAVTVVSPGFPSDAAERRTP* # PASA_UPDATE: g13473.t1, single gene model update, valid-1, status:[pasa:asmbl_6404,status:12], valid-1 NODE_3684_length_2960_cov_31.7091 . gene 115 2242 . - . ID=g13473;Name=g13473.t1 NODE_3684_length_2960_cov_31.7091 . mRNA 115 2242 . - . ID=g13473.t1;Parent=g13473;Name=g13473.t1 NODE_3684_length_2960_cov_31.7091 . five_prime_UTR 2175 2242 . - . ID=g13473.t1.utr5p1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . exon 1853 2242 . - . ID=g13473.t1.exon1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . CDS 1853 2174 . - 0 ID=cds.g13473.t1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . exon 1383 1629 . - . ID=g13473.t1.exon2;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . CDS 1383 1629 . - 2 ID=cds.g13473.t1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . exon 1033 1197 . - . ID=g13473.t1.exon3;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . CDS 1033 1197 . - 1 ID=cds.g13473.t1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . exon 513 811 . - . ID=g13473.t1.exon4;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . CDS 513 811 . - 1 ID=cds.g13473.t1;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . exon 115 317 . - . ID=g13473.t1.exon5;Parent=g13473.t1 NODE_3684_length_2960_cov_31.7091 . CDS 115 317 . - 2 ID=cds.g13473.t1;Parent=g13473.t1;3_prime_partial=true #PROT g13473.t1 g13473 MSTSKFAALAALVFLVATATAHQCIHDRLTLDSPAVFSEQALPERAKRAGDGTYDRIRIGFDISNLSLNDRYTCTREGQSFTVGTGARGTCSDGNDQNCLVQCAKEDVLTSAGISYIINKLLKPAITILEDRLNILRPAGGVTLKSATCGSFGGVSVTNNYKTPKSANMVGNWDVYDLVIFVTGRPVFGNTIAWALSCEYDASSGRPIGGHINIGMRNIKVDNSLLDNYNIRVVVHELSHVLGFSGGVPAYNNIIKQLSDPGKGTTVPFITSPKVLAQVRAQYNCPTMQGAPIEDFGGSGTAGSHWEKRIFRNEYMTGSAEQNSVISAVSLALFEDLGYYKPDYTKAETLAFGNGAGCTVATQLCSQWTGEFAICKDDPSAARPPRCTADGIAQAYCNTASFTSSLQSYYQY # ORIGINAL: g3924.t1 original gene structure, not modified by PASA NODE_963_length_15371_cov_41.5733 AUGUSTUS gene 4457 11815 . + . ID=g3924;Name=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS mRNA 4457 11815 . + . ID=g3924.t1;Parent=g3924;Name=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 4457 4607 . + . ID=g3924.t1.exon1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 4457 4607 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 4735 4877 . + . ID=g3924.t1.exon2;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 4735 4877 . + 2 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 5011 5973 . + . ID=g3924.t1.exon3;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 5011 5973 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 6181 6275 . + . ID=g3924.t1.exon4;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 6181 6275 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 6426 6590 . + . ID=g3924.t1.exon5;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 6426 6590 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 6691 6796 . + . ID=g3924.t1.exon6;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 6691 6796 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 6985 7151 . + . ID=g3924.t1.exon7;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 6985 7151 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 7305 7405 . + . ID=g3924.t1.exon8;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 7305 7405 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 7700 8012 . + . ID=g3924.t1.exon9;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 7700 8012 . + 2 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 8265 8397 . + . ID=g3924.t1.exon10;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 8265 8397 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 8558 8818 . + . ID=g3924.t1.exon11;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 8558 8818 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 9005 9106 . + . ID=g3924.t1.exon12;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 9005 9106 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 9251 9315 . + . ID=g3924.t1.exon13;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 9251 9315 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 9485 9601 . + . ID=g3924.t1.exon14;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 9485 9601 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 9744 9972 . + . ID=g3924.t1.exon15;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 9744 9972 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 10252 10409 . + . ID=g3924.t1.exon16;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 10252 10409 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 10597 10768 . + . ID=g3924.t1.exon17;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 10597 10768 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 10861 10989 . + . ID=g3924.t1.exon18;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 10861 10989 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 11093 11213 . + . ID=g3924.t1.exon19;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 11093 11213 . + 0 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 11335 11500 . + . ID=g3924.t1.exon20;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 11335 11500 . + 2 ID=cds.g3924.t1;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 11644 11815 . + . ID=g3924.t1.exon21;Parent=g3924.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 11644 11815 . + 1 ID=cds.g3924.t1;Parent=g3924.t1 #PROT g3924.t1 g3924 MGKPSAGGASAGRKPTAAASNQPMISRFFAAPAKKAGVDASKSNTECHRTGIALLSPQKSPVSGTKSTPASQLASPTRALASPAVVSASVLALPPTPAESEGRSQRASAANNRKRTTRALLDASSSDEAQDKQSPTRKVARLEQSDGGEGHDASVAHPPVATSRPKRIRRVIEDEDQGADDGESIGAGGGRHAKRRSVSAGNGADGKTADDSGATKAAAAVVGKLASGRQRGQSRAASGASGASGGGDGCESDDNEGSEGLARLMQISQSASLSQDARHRSSGKRPASANGAPASPKGKEPPASVESFAYVAGGPASCDTVVGEDRADARRRQQIHKRLLGVEIGGVKGQTDDDAAVGAAGAVVGPQSPGGAGALPTGSKLAALTPLEQQFVAVKRKYADAVLFVECGYKFRFFGQDAQIASKELNIMAFWNHNFLTASIPTHRLPVHVKRLVNLGYKVGVVRQTETAALKAAGDTKSKPFTRELKALYTKATLVGEDIHSALRVVLDDAETQGGLPQSTYLMCLSEDRTKGPDNVRIAFVAVRPATGDIVYDEFDDEVSRSELETRLVHLQPSEMLLPASLSPRTERLVANMAVKWGNDDGMRLERLPNDQFDHTGAFSRITEFYSSGNAATAHPLESITSLPSGVVACLSALIGHLREFGLESALKLTSNVVPFSSRNVMTIGGTAATNLELFKNATDGSERGSLYAVVNHAVTPFGRRLLRRWVSAPLMDKRDIEERLDAVECLAGCEAKFVADIRGMMSHLSDLDRGLCRIYYCKCSPQEFLSIVRSFERVSDAFGTAAALAEDAFASSSLLRALCKEIPRQAALVAPFLRDIDVDAARSGRKPDMFRRDEELYPSIPRTKTEIARVMKSISSHLADVRRTLKNSTLEYVTVSNVEFLVEVKVAHLSAVPANWMKMSATKAVARFHTPHIIAATKELQQLRERLEIEASAAWMTFLGQFSVHYDELRAAVRGLATYDCLLSLAAVARMPGYVRPSIVGEDEGCARVSVVAGRHPMVDAMATRGQFVPNDVNLAGDGERCMIITGPNMGGKSCYMRQVALLAILAQMGSFVPADAATVGIVDAVYTSIGEVGLALPGRIGSDVVVVALCIRIFIGTVVLFDGPGRMGASDNINKGASTFMIELQEAAEIVKSATPRSLVILDELGRGTSTHDGVAIAYATLHHVIAERKCLTLFVTHYPSLSGLEALFPRIVGNYHMAFMDDSPGTAEESITFLYQLTRGVAARSFGLNVARLANVPIEIIERASAKSHEMEKTVRSRGGIDGLHIYLLHEFSTLLHRRTSRDGDAVAVDGNTEEDLGMRIERVVSQIRAIARCASAVV* # PASA_UPDATE: g3926.t1, single gene model update, valid-1, status:[pasa:asmbl_10146,status:12], valid-1 NODE_963_length_15371_cov_41.5733 . gene 13926 15371 . + . ID=g3926;Name=g3926.t1 NODE_963_length_15371_cov_41.5733 . mRNA 13926 15371 . + . ID=g3926.t1;Parent=g3926;Name=g3926.t1 NODE_963_length_15371_cov_41.5733 . five_prime_UTR 13926 13993 . + . ID=g3926.t1.utr5p1;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . exon 13926 14107 . + . ID=g3926.t1.exon1;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . CDS 13994 14107 . + 0 ID=cds.g3926.t1;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . exon 14449 14904 . + . ID=g3926.t1.exon2;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . CDS 14449 14904 . + 0 ID=cds.g3926.t1;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . exon 15179 15371 . + . ID=g3926.t1.exon3;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . CDS 15179 15331 . + 0 ID=cds.g3926.t1;Parent=g3926.t1 NODE_963_length_15371_cov_41.5733 . three_prime_UTR 15332 15371 . + . ID=g3926.t1.utr3p1;Parent=g3926.t1 #PROT g3926.t1 g3926 MDAIKKKMASVRQEADEAIERANQAEAALKEASNRAEKAENDMDNLKRKIHLLENDLETAEERASTLQTKLTSAEQRAEDAERARKVFASQQDNDDGRVETLQKELASVKNRADDAEKKAENAARKIHLLESDLERAEERAADAEAKLKEADRQVNEFASQVNTSRVSERLDRSEELKDKIRQVEEKYREADLKAEQFGRKVRDLEKQNEKLEDALAESKVKYAEVKQELDDTLKQLADM* # PASA_UPDATE: g3925.t1, single gene model update, valid-1, status:[pasa:asmbl_10145,status:3], valid-1 NODE_963_length_15371_cov_41.5733 . gene 12144 13700 . + . ID=g3925;Name=g3925.t1 NODE_963_length_15371_cov_41.5733 . mRNA 12144 13700 . + . ID=g3925.t1;Parent=g3925;Name=g3925.t1 NODE_963_length_15371_cov_41.5733 . five_prime_UTR 12144 12554 . + . ID=g3925.t1.utr5p1;Parent=g3925.t1 NODE_963_length_15371_cov_41.5733 . exon 12144 12967 . + . ID=g3925.t1.exon1;Parent=g3925.t1 NODE_963_length_15371_cov_41.5733 . CDS 12555 12967 . + 0 ID=cds.g3925.t1;Parent=g3925.t1 NODE_963_length_15371_cov_41.5733 . exon 13088 13700 . + . ID=g3925.t1.exon2;Parent=g3925.t1 NODE_963_length_15371_cov_41.5733 . CDS 13088 13292 . + 1 ID=cds.g3925.t1;Parent=g3925.t1 NODE_963_length_15371_cov_41.5733 . three_prime_UTR 13293 13700 . + . ID=g3925.t1.utr3p1;Parent=g3925.t1 #PROT g3925.t1 g3925 MLASKGGLSSLRKKKNATTNKEKELFQAVNLGDSEKVMKLLTNTDINTRHKRGRTLLHMAALTEHSAVVSMLLERKGIDVNIIDDDGNTALHLAALFNRLDNAALIINHPSKDALILNNNMKTPYECAKSQDMRNLLGMYTRPEHEPVSFLPEKEPKPQRKMELPDTAVAPSPYTDSQVARRERNLKQRSRTKSVEPPSSVCVLL* # ORIGINAL: g3923.t1 original gene structure, not modified by PASA NODE_963_length_15371_cov_41.5733 AUGUSTUS gene 158 3673 . - . ID=g3923;Name=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS mRNA 158 3673 . - . ID=g3923.t1;Parent=g3923;Name=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 1721 3673 . - . ID=g3923.t1.exon1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 1721 3673 . - 0 ID=cds.g3923.t1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 1423 1545 . - . ID=g3923.t1.exon2;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 1423 1545 . - 0 ID=cds.g3923.t1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 978 1301 . - . ID=g3923.t1.exon3;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 978 1301 . - 0 ID=cds.g3923.t1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 692 838 . - . ID=g3923.t1.exon4;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 692 838 . - 0 ID=cds.g3923.t1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 439 559 . - . ID=g3923.t1.exon5;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 439 559 . - 0 ID=cds.g3923.t1;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS exon 158 264 . - . ID=g3923.t1.exon6;Parent=g3923.t1 NODE_963_length_15371_cov_41.5733 AUGUSTUS CDS 158 264 . - 2 ID=cds.g3923.t1;Parent=g3923.t1 #PROT g3923.t1 g3923 MMSAANAAGLASPAVEDIGKALVRVHDDLQQLRTSIDEAAHGAGGVAEAQVQVLRDALDRAEETLRRDARLIFQSSVHQHSVLPPLPERSVSPPLFAAGDAPLDRETQALVPFDSPTARRRMNNGSNGGNVGNGSGGALVLKGVRSSTEGQLRASVPGPNEPTPGQTARSSHKARLLANPAHSHTRQMLADQYNIPVDSTGAAPKQASYVQGRLYRSSTIAPNAPVPRANRVDPHLPPPPITEADARKGFRSLIERGLLPPTADFTPGLLLDPPPLQQKQARLCGIDEQRTKPIILSDSHHYIPAGVRLDLYTALVPSPQHAQSGAAETSLALFDGAARGTNRTPFMPYTPIGLIQTESRTLVRASFSGPGVGGSRTPSPTRLSPPMAGRPSIVTPGLNVRAASGRLSRQSMMEGKGRSYADILDAYSGHDFIVRNGAPLENTPEFEAFRRANEGQWGAVLSALRQLGKLSRDYSVAFMHVDGKRLASMAMSLDVAHFTRADLLSCVLNADEVRVILATPGRRFKAPDGREASATLLQSKWRMVSQRNEYRRMKRRNDAVTVIARGFRAMMRLRQTREKIAEVIAAQVARAGELHKEMLANWGHVGTGRRVIVHIPSWTVSKTMRSSIPRFTTLQNAQMSRLCDVRDEEVEVIYVCPVKLSDEALSYYGKLTGLGAKDAHTRFKIVIPENCDMFRSMELPLSQVLLYSPHALRRIRNFVRGNNAYIVPAIPGEADLRIAALLNIPIFSSPPDVMRLYAEKTGGRRLFQGTDIKQAPGEDGVCDEDMFYKKLAVLIVANIEIVSRWVFKIDYEFIGRGLAYFDINVMECVSFVKKQKAHYGTKWAKSWAEETAIKQVIEELRLAVPINTKFVTPDLYSSFQKYFSKFLASGGVIEAAPDFNTSSVVTVSVLVEPNGKTTMTSAVTQ # ORIGINAL: g10712.t1 original gene structure, not modified by PASA NODE_1070_length_14224_cov_57.979 AUGUSTUS gene 1919 6826 . + . ID=g10712;Name=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS mRNA 1919 6826 . + . ID=g10712.t1;Parent=g10712;Name=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 1919 2116 . + . ID=g10712.t1.exon1;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 1919 2116 . + 0 ID=cds.g10712.t1;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 2296 2814 . + . ID=g10712.t1.exon2;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 2296 2814 . + 0 ID=cds.g10712.t1;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 3062 3696 . + . ID=g10712.t1.exon3;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 3062 3696 . + 0 ID=cds.g10712.t1;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 3958 6826 . + . ID=g10712.t1.exon4;Parent=g10712.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 3958 6826 . + 1 ID=cds.g10712.t1;Parent=g10712.t1 #PROT g10712.t1 g10712 MQGASRHSVRRWLQTHSVGRGHLSPLWSPLSTVYARTPAESLIHPWPSVRIFSDWSGVRTGTALQKAVATTFTSLRLPSQSALTALIKKCGTVDASSSERMALMRSIEAHMLSAGLKPNAFHFTAWMDVYMRCVLKPSLEWLHPPSTAFTDPSAAAKSGGLVSPFNDYLARGNVHGAMSHMVAAGHPPVVETVNVVCRAYAAVGNVDGVEEAIRWMEVVWGLQPTEATFTNLLTAIHKKNGGVDTVQSVLARMARAGIRTSAATFNNLLGVALRTGDAPTVLRLFSLMRDTAVPPDATTFRCLASCAGAFFDGVFAEKLLYWMREAGFEPDAHVLNNLLQVYARSGDARSGNAVLTSMASSKMRISESALAVLLTADWFVPRGAAETNALLSALATDGVKIDTRHLRHLLRMALQRGDGEVGLTVVMDAFSRHKLQPDEALLRMMIVAACRASRDHLVVSLVDEIEARKFKLDDATTYLTMSLFLKKGRRDCFERVTCLGRAAKAPHTPPQDATSISPLAANAAEPQLSAESLRFLSCSPEALKRLALDALHSGYGDISIACILCLRERGHVADHLFVKACVEAYGGQIVRLATSRAMPGGADGWIVDAVRWLDRLMTALRGDARAEDVLPQLFRGIARHTSRANAVVRASAVHPSVHPGAHSGPLRTGGVSAGAMKVALALLAHMEEHGAVRTAACYGELLLAAADCEGDVRDWVLRVASRAERAGVAVDAEAWASVSATLVDRGYPNAKAIAVAAMRQHQPEPSSLPTLTEYRGSNATAEDHTLHVDPQPQTHCKGTVNQSAGKSSITLVEEVEEVLGARGMDAAADLIASERGRPFMEVSGAHACIVDWAVGRSSAGLVDNAVSHVMSVGLFTHDRVLAWVCHAYVRRHKESEGIDTVDRLIARGVSPSSRGCGRIALLFGTNNASFTRDALVMLRARGCAAGGDMYMSIARRCVSANDLPTALWSLDSMAKDGRSIPPTVARTYLHLAAQNQSVSLYYKTLQALARTNGLGLDDWGQAARHVSDAAMSECAVLFVNGGNFDAFRKTLWMWERMCRAAFEARIGRPRRAAVTPSSPGMSDSQRSKRCIADTPRLDSNIRRLLLRICGSRGDAKALGSVARLCAWRGEPLDRADVYAVFKGALRYNRPDFAAWLAENAGREGLGSMRMTSRSSSMTQTSTGGARGNIDRSNIGSPGRQEAAEAAQAESARGGPAVLSPAFSLDLMGYTGLISAFGRIGDREGAATWFRHMLASGISPDPRCYQSLFRAHLAHESTTKLSQSLPPGAPAEKASGVALLTPGRSLWMGHPNVTPSTRSAGRYQEDGRRPLIPPAVEISACSDRDISSFITWATPWIFAGSDKRTGWDTTDGLWLRERLHAWRDAISTYGRYPRDSESAATVSVSNG* # ORIGINAL: g10713.t1 original gene structure, not modified by PASA NODE_1070_length_14224_cov_57.979 AUGUSTUS gene 7943 14123 . - . ID=g10713;Name=g10713.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS mRNA 7943 14123 . - . ID=g10713.t1;Parent=g10713;Name=g10713.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 14100 14123 . - . ID=g10713.t1.exon1;Parent=g10713.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 14100 14123 . - 0 ID=cds.g10713.t1;Parent=g10713.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS exon 7943 14008 . - . ID=g10713.t1.exon2;Parent=g10713.t1 NODE_1070_length_14224_cov_57.979 AUGUSTUS CDS 7943 14008 . - 0 ID=cds.g10713.t1;Parent=g10713.t1 #PROT g10713.t1 g10713 MCARLCWYGLEILLEDDGRPEVIAADTSRDGSWVKLRLRQGPGSGPRGDVDFFLQSLNAMMTPRQFHIATEVIEAYFDVSGTPASPFDSRRDSGLPLSLDAQNPASDAAVSHNKSLRPDDFGKIERLLQQYHAQPDRKSGKYTLGADGLIGTSIGSSGRFGDSSAYADDDDTGDFNEDDVFYELNDDAFACAGPTSKAAASPPHHVRPHQGMGHSDVPVDSRSAGAEGAPAGTASTPAQAEEIAFQCKLQVRAAIVALLLEEPSSHQSLKSLSELFFARAASRLASGSLSGSAFGPGHPGSAGTLCNENHVIAELAHIVAKHSESLLRSKKELSVGAIIMREVVRSGDRSTSATAPPPSVCGDIGGGLYTCTDILRFDSNFEVPGVSPAGIPDHPPAFEDVRDRESGDTGTSASVGPHGRKSHVPASMHASSSQRVATHDLRVVVQSVAMGSIVETSTVVTLQPLFATLDLNVINRLVLYLDKSQVPTGDRSTCEGGENARDGPCGRDMEDSLEGLNAHRAFDQIMNEYQRQQSITVQANPPRTTVQVRIPFGRIDIAFPVIDMRPAAEKASEAPAPMVHPEKLIVDIIRASLNSEASPHAARSSILVSADHMEMYFKSKAAGEPPVFIAGIYPVGLESGDAALPNVEISTKSLAYAPIDDDEPDKRGTSTPRNLGDEEGPDLGSDDADGSPFSTLYTTFEGEEQAVMSANAADMDRFQAAAIQSSTTFVQLSLPCVLAALPRNVLGAFYDRINDLLLWEPLPGVFRSGADDGPVSELGAATVETFALCGSPSSPSSSEDENDEPARGAASHSGKATGVGGLHRRKKAARLKPKLALPSFMSLAVTISRARLELSESEPMLGSARPKRYIADVSDAHIFTVVDHMGTPKRYICINVDDLEVFDDVAANCGMASEGAGGIVERIPILYKSENLSGVPGSPPILAVTVMILPDYAKRTKEMKVSVDFSGVTLLHAMTPDAEEHWLFHIIEYSTLVDPFVPGYVPFVQFMKMYVNVADLSIDYRPRYIPGRALLRVGSVRMSSNVVPESSDLLLRFLFQDSSCLIIDDARYVREWTHTDTEGMSALGRGVYATVQAPRYPPRNPIAYWEARGFVQVVSMGYLDLLIRTNSAGGLPKLSVEITNNMLNVRTCADSFQAFVDILSYYAGSGDLVAAMLPVDGGTPVDRPVKPTSATEDVDADVFYDPIATALTPAAPGAPVAPVPADSIVDDMLEMLEENAFGLSFGGPRPENVRANLLRGGTTAAQASAIGPSHASGSKHARVQKAGASAAMEGEIKVPAPRRSVDVFASLDEADGGLDFVEDFYDVSPTATESGDEGLPVLSSQLSYAADTGAPMDAPPEFDFDEFDDDNPLAGALDEYSDSSPSNRTDGLRAFLMEEFRGPSLYPSISSVSGLVHGTSGADKTPDDIVRVLDGDGLLKNISVHHFAQPTAGERLDKLRPPKDMPASLNRIIVRDVNVTWSLFGGFDFGGPVTPAGDGRKEMPLSKAASAGTFCASDGDMDGWITPNSIESPAMDRRSVGPNTGTRERTRSDASIGSAERQQRMCSRRTDECVELQLSHLSIEHDAFVPGKQHASRLVVLLRDIEVRDRLTASQWNKFMCYMRSDRTPRVSGSDMFSFELVSVRPNPAIEIEELRLRVTLLPVRLNVDQDALDFLVNFFAHSADFAREYKKGADEILRLLKEDAHQRTRVREATEDVDREIPPSSRESASGQPLRGDGQRSQQTASKTLASEPASPFFQHCVVGPVHVRVDYQPKRMDVDMQSIRSGNFVKLLKLLSIEGSELRLDPIRLSGVQGWPRLGEAMLAAWLPHVRTTQIPGMVAGIPPLRSVMNLCAGVADLFVIPLRQYQTDGRLLRGLRRGAFSFARTAGLETIHNIAKLAVGAQTILEQVDDIVSGSETERRRRALAASRDADGSRRSGQPEGVKEGVRLAYDSLVRNVNEATSTLVSRPIEEYACTGAQGYIKSVIRAVPVAVIRPMIGATEAVSKTFQGIRNAVDPDARMEMEDKYKRLS* # PASA_UPDATE: g10711.t1, single gene model update, valid-1, status:[pasa:asmbl_266,status:12], valid-1 NODE_1070_length_14224_cov_57.979 . gene 351 1537 . - . ID=g10711;Name=g10711.t1 NODE_1070_length_14224_cov_57.979 . mRNA 351 1537 . - . ID=g10711.t1;Parent=g10711;Name=g10711.t1 NODE_1070_length_14224_cov_57.979 . five_prime_UTR 1337 1537 . - . ID=g10711.t1.utr5p1;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . exon 1309 1537 . - . ID=g10711.t1.exon1;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . CDS 1309 1336 . - 0 ID=cds.g10711.t1;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . exon 903 964 . - . ID=g10711.t1.exon2;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . CDS 903 964 . - 2 ID=cds.g10711.t1;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . exon 351 667 . - . ID=g10711.t1.exon3;Parent=g10711.t1 NODE_1070_length_14224_cov_57.979 . CDS 351 667 . - 0 ID=cds.g10711.t1;Parent=g10711.t1;3_prime_partial=true #PROT g10711.t1 g10711 MSFHFANHAEDVHADSRTELIVAISAALKELQLEYALGHETAIIESHSLRRLCSLIGAVLRHFVRTRSGLFERSADTVVWQLLTRLSRREATTHISNLRHATSSRGKIMAWIRLAINENALESYLNTLSADPGLV # ORIGINAL: g7256.t1 original gene structure, not modified by PASA NODE_1609_length_10209_cov_41.7578 AUGUSTUS gene 200 3589 . - . ID=g7256;Name=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS mRNA 200 3589 . - . ID=g7256.t1;Parent=g7256;Name=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 2653 3589 . - . ID=g7256.t1.exon1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 2653 3589 . - 0 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 2292 2485 . - . ID=g7256.t1.exon2;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 2292 2485 . - 2 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 1973 2175 . - . ID=g7256.t1.exon3;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 1973 2175 . - 0 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 1631 1791 . - . ID=g7256.t1.exon4;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 1631 1791 . - 1 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 1337 1465 . - . ID=g7256.t1.exon5;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 1337 1465 . - 2 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 899 1161 . - . ID=g7256.t1.exon6;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 899 1161 . - 2 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 504 675 . - . ID=g7256.t1.exon7;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 504 675 . - 0 ID=cds.g7256.t1;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 200 261 . - . ID=g7256.t1.exon8;Parent=g7256.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 200 261 . - 2 ID=cds.g7256.t1;Parent=g7256.t1 #PROT g7256.t1 g7256 MIAEGDGTLATPWLTRAATAAGSATPHAGQTRGRRTPGQVELGESPVKRKYSVFDKLSPIEVGPKPLPKNAWKNVSSSGTIPSRGVAGSVSGFVRGIASAGAMPVRPERSTSAMEDLNASAHSRTTAHHDEQARPHTAAAALGGTSPRAGAGSHHHGGGSAPLQRRGTSTRLSAGIPADHMDPDLLEDRLPQPYRMIDKIVSAFLDDVWGTIVRNEEARQTRLQAVSTRRLATCDDVKAIPSTAQVTCIVATPDERWTFAGTKKGSILAINPRQWYSVSSTTVIDEKMSVAVMQVEMMGDCAYVLAVGMKEDGSVRLYGFAETVFVALQSFDGAFPSFKLSSDAEMFALCGGDGQVSFFQLPAKTWAHRVLATGGDDRAGTPTRSHTSLVSAPPQSTRVNQPTFFMRIGAPPEPPLSKAYLSTRAAERSPLGDAPQAQQNSKKLGAPSVHFTREPIRFGGSLTTRDAAQLLNASAAIWWNGSIQVHKYSLLKRTYGPKDLVSPESAWVHPQVIKCSASSECGTLLATGLRNGMIVIWDCILGVKRSISGNALGVRICDLTFCGSAVLVAGMSDGVTVMLDTRTNKAVVCAPPDEEGDGGDVAGQWPPSHSYDSAHSPVIAVVPMPRERMFVSMQRQMGHVYDSQTGRCLGVITLQGKDGVQGTCEAADVAGFSLTARFVDEALVFRGRMSVSTETKSDGQPSIPLFE # ORIGINAL: g7257.t1 original gene structure, not modified by PASA NODE_1609_length_10209_cov_41.7578 AUGUSTUS gene 4249 4965 . + . ID=g7257;Name=g7257.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS mRNA 4249 4965 . + . ID=g7257.t1;Parent=g7257;Name=g7257.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 4249 4520 . + . ID=g7257.t1.exon1;Parent=g7257.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 4249 4520 . + 0 ID=cds.g7257.t1;Parent=g7257.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS exon 4653 4965 . + . ID=g7257.t1.exon2;Parent=g7257.t1 NODE_1609_length_10209_cov_41.7578 AUGUSTUS CDS 4653 4965 . + 1 ID=cds.g7257.t1;Parent=g7257.t1 #PROT g7257.t1 g7257 MPRTATVERSTKETKINLTVNLDGTGESTINTGIGFLDHMLCALSKHGRIDISLVCDGDLHVDDHHTVEDCGIVLGSAVKQALGEPRGITRYGFAYAPLDEALSRAVVDVSGRPFADVNLKLTREKLGTLSCEMIPHFIHSFAVAANLTVHVDVIKGENNHHMAESAFKALALALRAAFSFDGTNAVPSTKGVL* # PASA_UPDATE: g7258.t1, single gene model update, valid-1, status:[pasa:asmbl_2130,status:12], valid-1 NODE_1609_length_10209_cov_41.7578 . gene 5500 9245 . + . ID=g7258;Name=g7258.t1 NODE_1609_length_10209_cov_41.7578 . mRNA 5500 9245 . + . ID=g7258.t1;Parent=g7258;Name=g7258.t1 NODE_1609_length_10209_cov_41.7578 . five_prime_UTR 5500 5566 . + . ID=g7258.t1.utr5p1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 5500 5660 . + . ID=g7258.t1.exon1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 5567 5660 . + 0 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 5795 5889 . + . ID=g7258.t1.exon2;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 5795 5889 . + 2 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 6021 6186 . + . ID=g7258.t1.exon3;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 6021 6186 . + 0 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 6453 6613 . + . ID=g7258.t1.exon4;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 6453 6613 . + 2 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 7087 7227 . + . ID=g7258.t1.exon5;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 7087 7227 . + 0 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 7531 7667 . + . ID=g7258.t1.exon6;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 7531 7667 . + 0 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 8000 8151 . + . ID=g7258.t1.exon7;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 8000 8151 . + 1 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 8332 8414 . + . ID=g7258.t1.exon8;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 8332 8414 . + 2 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 8659 8876 . + . ID=g7258.t1.exon9;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 8659 8876 . + 0 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . exon 9002 9245 . + . ID=g7258.t1.exon10;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . CDS 9002 9080 . + 1 ID=cds.g7258.t1;Parent=g7258.t1 NODE_1609_length_10209_cov_41.7578 . three_prime_UTR 9081 9245 . + . ID=g7258.t1.utr3p1;Parent=g7258.t1 #PROT g7258.t1 g7258 MLSRLGLVPRVALRPTQAAYAVQQRRDEIRNYATANKIKVANPVVDLDGDEMTRIIWSLIKEKLIFPFVDVKIEYYDLGLPHREATQDQVTIDAAEAILKHSVGIKCATITPDEARVKEYKLSKMWKSPNGTIRNILGGTVFREPIICEKVPRLVPSWTKPIVVGRHAFGDQYRATDLIIPGPGRLEVSFTPAKGDKIVKTVHEFSGSGVGLAMYNVDESIEEFARSCFVFALQKNWPLFFSSQSTVLKAYDGQFKRVFQSIYNAEFQEKFAKAGITYEHRNIDDMAAYAVRSNGAFVWACKNYDGDVESDIVAQGYGSLGLMTSILVCPDGKTIEAEAAHGTVTRHYREHMKGKETSTNPIASIFAWTRGLAHRGRLDNNPQLVTFSETLEKVCVETVNAGGMTKDLALCVLGPKVTRADYLNTFDFLDRVANNLRTKLA* # PASA_UPDATE: g4367.t1, single gene model update, valid-1, status:[pasa:asmbl_5504,status:12], valid-1 NODE_3067_length_4410_cov_200.142 . gene 3333 4085 . + . ID=g4367;Name=g4367.t1 NODE_3067_length_4410_cov_200.142 . mRNA 3333 4085 . + . ID=g4367.t1;Parent=g4367;Name=g4367.t1 NODE_3067_length_4410_cov_200.142 . five_prime_UTR 3333 3374 . + . ID=g4367.t1.utr5p1;Parent=g4367.t1 NODE_3067_length_4410_cov_200.142 . exon 3333 4085 . + . ID=g4367.t1.exon1;Parent=g4367.t1 NODE_3067_length_4410_cov_200.142 . CDS 3375 4085 . + 0 ID=cds.g4367.t1;Parent=g4367.t1 #PROT g4367.t1 g4367 MDVEGDDNGNKNAGCASTAEFENNGEQPPIVGPASDLRAPSGTTTPTSYAWKFFVRIDSPLVPNVNVRLLEECTTLMSLKTRILTKLGKHMQPLRIRSIDDFNVQLLDRDDRIYFNLEDSDWPASYYSGCSLQVTPVHCTPADGGLRAANSDVSGLVSPTFSRRSSSQLSMHASVQHDSATSTGQTSGYSSAVPAADVMTSAANYLYKRGRQQVRADSDDKEGAKMKRARSQKEPG* # PASA_UPDATE: g4366.t1, single gene model update, valid-1, status:[pasa:asmbl_5503,status:12], valid-1 NODE_3067_length_4410_cov_200.142 . gene 1 3088 . - . ID=g4366;Name=g4366.t1 NODE_3067_length_4410_cov_200.142 . mRNA 1 3088 . - . ID=g4366.t1;Parent=g4366;Name=g4366.t1 NODE_3067_length_4410_cov_200.142 . five_prime_UTR 3050 3088 . - . ID=g4366.t1.utr5p1;Parent=g4366.t1 NODE_3067_length_4410_cov_200.142 . exon 2893 3088 . - . ID=g4366.t1.exon1;Parent=g4366.t1 NODE_3067_length_4410_cov_200.142 . CDS 2893 3049 . - 0 ID=cds.g4366.t1;Parent=g4366.t1 NODE_3067_length_4410_cov_200.142 . exon 1 2664 . - . ID=g4366.t1.exon2;Parent=g4366.t1 NODE_3067_length_4410_cov_200.142 . CDS 1 2664 . - 2 ID=cds.g4366.t1;Parent=g4366.t1;3_prime_partial=true #PROT g4366.t1 g4366 MTKISARDLCAGCGLLVSIRTIQRHKHRILAGFTCGDRKGRKAALHYLPKLAGGVKDVREVNGWEHVARNGNNAEYAQAGRSSDEATVGEVVHPNEFEGDGEAQMLNHNNEDAYASGNCDGIRRAPCGNAGGDSNIHEDAHMHADSSNDIDIDIDAHANDDGNGDDHNLNVNADSDGDGDATADDGGNTTADSSDGYVTADCSNSNGDATADGNGDGDSTAGSSDGNSYASVDGDGDGDGNGDATADSIDRDSDGDASADGSDGGARADDGDGDASLDGSDGGVCAYDSDSDATTDGDDQREGSDRGDTSVYEDGSDKADNIICEGSRISRSVALELLLRWKVIHNIGNNAFAELCALLHHHLLPDGNSFPGTFYLFKQAIRDSTSTRIKAVDYHVCCCGGHCFPRLSRHLWSDHADDVCPKCRAPQFKRMPSGEIRLSDARRFKYIALIPQLCLLMRSQAFVSAVTSYFAVRQARYQERHEGTPGTFYDVFDGQLWCDLAQRFPDVCNDPYCLVLDVGFDFAQPYRSNVAASVGPIVVRILSLPPHLRAKSMYHLLVGIVPFGSQPPAIHGYFECLINELQQLFDGSTHVPCAAEEKGIPLRAVLLISVNDRKAFEKVSGIQSVAGFVSCGRCLFKGERLEQPRRAADGAQKKLYSGTFFRGYLSGAAYSATQRSNESFRLQAEQAAWGLVTQQDTGIAFVSPLAKLEYFDVVSGFPIEVFHNLVRGLVYAFWNRFFGKLEWGDQGYDFILSNNARREITRRLSTIVVPHDFGRKPCDVVRYLGSLKGEELLNWTVVFSPFVMEGLWPTEWLRVAWMCLREAVCIHLREAAVTEAQLCFADRCMQQYAALVERFMPPDSVLTMNLHSAAVHLFGQVQQTGPCSATAGWWLERAIGSLLRLVLGRTTSSPELSIVDAYVFQTERRMLRDAGILPPLPAIF # ORIGINAL: g981.t1 original gene structure, not modified by PASA NODE_783_length_17734_cov_45.3449 AUGUSTUS gene 241 3384 . + . ID=g981;Name=g981.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS mRNA 241 3384 . + . ID=g981.t1;Parent=g981;Name=g981.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 241 3384 . + . ID=g981.t1.exon1;Parent=g981.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 241 3384 . + 0 ID=cds.g981.t1;Parent=g981.t1 #PROT g981.t1 g981 MNTQANTQRARVLVSPVLDGMTAMTVRVDKGLTGTAEGSTTKTPADRCILVGDVSGSMAGAPFNIMRTAMLRTAATLGTRCDLVAFGSTARRVTVEQLSTMSANEGTYFAPAFRLLTTLVADKENRGCRVVFFTDGQAADGRELTGAYDAFVAASRAADVIVHVIGFSADHDVRLLTSIQKAGAEPGIFQYIDNSNKGEIDTAIEVAVLEPTATKVTATVAFSDGMASKAASLCCGNAEPNVWQAVLFMSGHASLEAGKSVSVTVSDAIDLGAAAMVATIETSDAVSAFHQRLAFVGDALKRLATSLQQTNDTRAALALLQRLRDEVHAVHSEAQCLKGVEQRTGRRAVIVHALECKSAATQMLGILSGEIAAAAGATNATLAKLYDAAYHGPMRRGMRKKIDERAEKNAKRFEYLDKRRMELAGEAISNDDAEYLREFVCAVSAMTAAEALASGDAIGIGLWITRPEAAIADPSLVNVVAVARSLISIETFRDAVEFAVDADHDAHGGFGGRRDGDDDAGCILRGVAAEKINAVLALRITDQHWRMARVVAPPVYGWQVALDPFGYAPAQTQVLPFLALAAVMADIHSNGGAPTEFQSRIESLIVDTCAQTLADFGGDEYVAQMAASVHAFAAGVSGRTADKVANLRLMLAQLRVLQLRHPALVALNDAEWRALSTGLFEEAWRRERTTNSERAIREAWDRTALLAPFETQYQSVRHRQITGRGNTQDTPFRARFVRRIPRADVPSGAGADNADMSETVAGIGCISLTNRVSGGNDTPESLTLTTDVDSESLAAEVARFVAAYSVDIPSGMNSVFAVAKAAIPERFHSLLSPETYDAGTLALLSVQNVRHTRNADRRAAIEDGSYTDPFTDAFAGITRIMRASIVAERDGSVACFEAALVNTEASALAAKFSITRDLYEAAGLLLDTYMGRATFPAFVSAVCGRGALLPVEKMRMLLRGSYKGVTLFRDAVAIQNVGKTYGDLFWHPCKQTFNAFIRTHGVDEMTARDLFPRRKHRPENGEPLGRPVHAADAANTLGNTADTVAVS* # ORIGINAL: g984.t1 original gene structure, not modified by PASA NODE_783_length_17734_cov_45.3449 AUGUSTUS gene 10928 12310 . + . ID=g984;Name=g984.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS mRNA 10928 12310 . + . ID=g984.t1;Parent=g984;Name=g984.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 10928 12310 . + . ID=g984.t1.exon1;Parent=g984.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 10928 12310 . + 0 ID=cds.g984.t1;Parent=g984.t1 #PROT g984.t1 g984 MALPSRTSLAEESSDAAAVEGGDVVAPLRESSTYPAEWADEARDSVEVGIADVPDDDGDDGDGKSENIDATGELPEEALSMLTLEFKDAATERAYYASRSDQQKRVFQAACISLCVAIAVICGLQASGVFGRTPHYRTKAQDYSYVTGIDAALCITLAISLHIPSLSAALMRHRHFVQFGILICVVTNICVVNSYASDGGMAPTAWLIMMGVPLIMEGVRVSAGCLALVGIEELVRVLMSGIHVLNAIPVLLPFGIAMSFCVFAVYMTEHRFRRVWVAQKQITARAASLRDERMQTEELLNLQLPQSILARVRSKSNEAGSEDQVVAERVPCVTVVFVDIDGWHERTDERGPEEAITLLNDIFTWFDALCVMHELEKIKTIGPVYMAACNIPEAREGHTELVARFALALMKGWESQAEALDIPEFGLRIGIARGEVVAGIVGDLKFCYGGWAWPVLSRCR* # ORIGINAL: g983.t1 original gene structure, not modified by PASA NODE_783_length_17734_cov_45.3449 AUGUSTUS gene 8211 10077 . - . ID=g983;Name=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS mRNA 8211 10077 . - . ID=g983.t1;Parent=g983;Name=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 9976 10077 . - . ID=g983.t1.exon1;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 9976 10077 . - 0 ID=cds.g983.t1;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 8897 9870 . - . ID=g983.t1.exon2;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 8897 9870 . - 0 ID=cds.g983.t1;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 8569 8720 . - . ID=g983.t1.exon3;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 8569 8720 . - 1 ID=cds.g983.t1;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS exon 8211 8353 . - . ID=g983.t1.exon4;Parent=g983.t1 NODE_783_length_17734_cov_45.3449 AUGUSTUS CDS 8211 8353 . - 2 ID=cds.g983.t1;Parent=g983.t1 #PROT g983.t1 g983 MAFSGALKITDLDDFITPSQECIKPVKVEKTSDKVSKISVELDGSYVHVSDDGASTKLEKAKISLNDCLACSGCITSAESILISAQSQEELFKVVASNAAAVAQGRAADVKLIAVSVSPQSRASIAARYNLSIADAGAHLAGFLRSIGVSYVFDTTFSREFSLLETAREFIERHKAATSTGSRKNVLPLLSSACPGWVCYAEKTHGSYVLPYISTTKSPQQVMGSLVKDHLATTLGRDPASIYHVSIMPCYDKKLEASRADFYSDVFRTRDVDCVLTSGEVETLVGERCDGSLANAPRSTYDALFSSVGVENGGNTETAVYGHSGGGSGGYLEYSLRQATRELFGTDCGDIKYQTLKNNDFRETTVEVAGRVALRFAVAYGFRNIQNIVQRIKRGKCDYDFVEIMACPSGCLNGGGQIKPVSSESPKDLLARVESLYQSPILRNPGDDREIDRLYV* # PASA_UPDATE: g982.t1, single gene model update, valid-1, status:[pasa:asmbl_9358,status:3], valid-1 NODE_783_length_17734_cov_45.3449 . gene 3749 7421 . + . ID=g982;Name=g982.t1 NODE_783_length_17734_cov_45.3449 . mRNA 3749 7421 . + . ID=g982.t1;Parent=g982;Name=g982.t1 NODE_783_length_17734_cov_45.3449 . five_prime_UTR 3749 3813 . + . ID=g982.t1.utr5p1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 3749 3934 . + . ID=g982.t1.exon1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 3814 3934 . + 0 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 4025 4152 . + . ID=g982.t1.exon2;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 4025 4152 . + 2 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 4323 4910 . + . ID=g982.t1.exon3;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 4323 4910 . + 0 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 5092 5376 . + . ID=g982.t1.exon4;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 5092 5376 . + 0 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 5505 5993 . + . ID=g982.t1.exon5;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 5505 5993 . + 0 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 6132 6210 . + . ID=g982.t1.exon6;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 6132 6210 . + 0 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 6350 6809 . + . ID=g982.t1.exon7;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 6350 6809 . + 2 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . exon 7048 7421 . + . ID=g982.t1.exon8;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . CDS 7048 7243 . + 1 ID=cds.g982.t1;Parent=g982.t1 NODE_783_length_17734_cov_45.3449 . three_prime_UTR 7244 7421 . + . ID=g982.t1.utr3p1;Parent=g982.t1 #PROT g982.t1 g982 MSAGAVWPPTIVPVRDLATELGQTGTGNLVDTNTWIEMKSATANALIYYTLDSTKPNPFDKNNKSTLRYRRPLVFEPGEFVIKAIAITETRDRESSVVTRPLSVVSAKRANPTATEEFETERAGDTVLSRSGSTFSAAAVKSNMRHGEGDGRNVALTRDREARAAQAAAEMEAASLIQTIMNQKTEEARYRPHIKPDLPPEAKGIYIKEERTYCTHCGEFLGGKAVYCPKCGIRTKEDDVSAALRAALAAKISAANTHKGAKLNPADLYSVECIGCANQVLDTYRYCNSCGTRLKYGKSVDAVAISRPQSAPGSKTKTKQPHATERPPEKEKDKRFCTECGITVADGMNFCGTCGTKAPKQAKKPKHAPEDSSKSRPASPSKELQRLHEIINTTNPRGVMRKYLEKIHETAAKVAVQTDRVRNPAKPKLQEVDLVAPQPLNRPFSAPSRVPSARSPSPKPSAPVVVTQEMMRSQTKISGYWRSQVDTLSTSLRSYAQDNALFRETIGHYRLGEVVAATIHDDGTELNLSLTMQIQGRHPDRTSNLVFTSADNNMDSSAKAKLIAAAAAMSATASMSSMAKSRKDKHAASSSSMKGAPAVSLESRLLLLEVQDDAQGRADVIRDLLIRGADPNATDAKRVPAVALAAASGHEEAIAVLAKAGAAVNATFNHGTTALHRAVAGKSQPAAKACIDVLLENGADPNLRDSNGDTPCNLAVKLGRQELAKCFSQHIGSDLLTKMLGKPPKKTKKPKKGKKSRDRKESASSASESDASSRSASDDDD* # PASA_UPDATE: g986.t1, single gene model update, valid-1, status:[pasa:asmbl_9360,status:12], valid-1 NODE_783_length_17734_cov_45.3449 . gene 15653 17134 . - . ID=g986;Name=g986.t1 NODE_783_length_17734_cov_45.3449 . mRNA 15653 17134 . - . ID=g986.t1;Parent=g986;Name=g986.t1 NODE_783_length_17734_cov_45.3449 . five_prime_UTR 17059 17134 . - . ID=g986.t1.utr5p1;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . exon 16900 17134 . - . ID=g986.t1.exon1;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . CDS 16900 17058 . - 0 ID=cds.g986.t1;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . exon 16546 16662 . - . ID=g986.t1.exon2;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . CDS 16546 16662 . - 0 ID=cds.g986.t1;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . exon 15653 16383 . - . ID=g986.t1.exon3;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . CDS 15775 16383 . - 0 ID=cds.g986.t1;Parent=g986.t1 NODE_783_length_17734_cov_45.3449 . three_prime_UTR 15653 15774 . - . ID=g986.t1.utr3p1;Parent=g986.t1 #PROT g986.t1 g986 MSFPASSQSAITMYRIRPHFSHGEAIELPTAVYSVKPLIVAVRVFGEQTNELSMRVGTLKARQARVIGQLDELKSQADKLASQLTSVALNPQSRVPTAVIHASPANPPYASLAILHHVIRHGLSATVAYEHSTLGERAPAALLQNHGNADTAPSKVALVWRKIATPVIIVAPQSQAPIAGDVNIARYLCRVYGLSSLYDDKDALGASAIDHWLDVARSLAVDIKQIPALLRSADAALEQTQFLAATPTPTLADLALRAAIFAVPATRRTASTLPSLSKWITRVDAAPHVQAALL* # PASA_UPDATE: g985.t1, single gene model update, valid-1, status:[pasa:asmbl_9359,status:12], valid-1 NODE_783_length_17734_cov_45.3449 . gene 12613 15617 . + . ID=g985;Name=g985.t1 NODE_783_length_17734_cov_45.3449 . mRNA 12613 15617 . + . ID=g985.t1;Parent=g985;Name=g985.t1 NODE_783_length_17734_cov_45.3449 . exon 12613 14800 . + . ID=g985.t1.exon1;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . CDS 12613 14800 . + 0 ID=cds.g985.t1;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . exon 14997 15187 . + . ID=g985.t1.exon2;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . CDS 14997 15187 . + 2 ID=cds.g985.t1;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . exon 15303 15617 . + . ID=g985.t1.exon3;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . CDS 15303 15572 . + 0 ID=cds.g985.t1;Parent=g985.t1 NODE_783_length_17734_cov_45.3449 . three_prime_UTR 15573 15617 . + . ID=g985.t1.utr3p1;Parent=g985.t1 #PROT g985.t1 g985 MCKFGARNRIQCTKEVADVLIGSGDYKVESAGKHDFKGKGSLETFYLTDFARRTQSRASLREIGAARDSAMREEFEIQAARRRTSILRAVVGGYHDARSTIASVLSSSGSSNGIFLERDKEPDPAIPGTVAPLRPTPVLSTEDVDEGRGRRLQSELNHSKVTLDRLGMLGSQSDNRKPTGSGLNTDALLKAVRKVSASRAYSPPGTRRTSPSGTPMTARRKVSTMSRTGPLKLPNTTGIGTMWGSTVALARKVSVGQNMVVPTTVVLPVTPTPGAGPSGVGQTSWLSVLALNEGRDIGRSLDSIDSKDAIQGSYDVREGLEGQDASATSSAVGQTLVRSSSKLDMPRSRRRSRLESVTFATANTNHAETVSSSIMGGVGSVGGGDQSSDADGAPEVEEPVIVGQKQALASAVAEKGASSAVRDLEQTRPNTITLAFAEQKLEMLYCLRHSENMRMVSLMHVLCAWGALQLFLACDILGGAGEVERRRIYFIRCVGGTALCLVAAVVHMFPITRTGQWRTGLFLAGYIVISIAALLVNSAFSRNWEDQEGFLNALTVHMFLTTVVMATPSLLFRNAFVLMLGMLALIIVLGVTGWAKLSASDFVAAAVGYVMVLVARYVFERFLRRHFILQQISATQEEELQKEQALGQQLLHNILPKSVAHILAENPDARSAATARFFPAVTVLAMDICGFTQMSSGMSAQDVVSLLNGLFRRFDSLVISCKVEKICTIGDAYIAASGAPDFVPDHADRIMSLAIGMLTVVSQNNNNHPHDAPISVRVGVHSGACFGGIMGGQLRFKYDLYGDACYVSQLLEQQGTPGYIHASETTYLETALANSMVQSVAGVDVMPAPPVAVTLSGSDSVIAAVLIRPTEKTLRAFNLLFG* # PASA_UPDATE: g9796.t1, single gene model update, valid-1, status:[pasa:asmbl_10240,status:3], valid-1 NODE_990_length_15006_cov_54.9688 . gene 2343 5336 . + . ID=g9796;Name=g9796.t1 NODE_990_length_15006_cov_54.9688 . mRNA 2343 5336 . + . ID=g9796.t1;Parent=g9796;Name=g9796.t1 NODE_990_length_15006_cov_54.9688 . five_prime_UTR 2343 2615 . + . ID=g9796.t1.utr5p1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 2343 2744 . + . ID=g9796.t1.exon1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 2616 2744 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 2940 3020 . + . ID=g9796.t1.exon2;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 2940 3020 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 3139 3187 . + . ID=g9796.t1.exon3;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 3139 3187 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 3302 3444 . + . ID=g9796.t1.exon4;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 3302 3444 . + 2 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 3704 3859 . + . ID=g9796.t1.exon5;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 3704 3859 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 4107 4313 . + . ID=g9796.t1.exon6;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 4107 4313 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 4588 4666 . + . ID=g9796.t1.exon7;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 4588 4666 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 4836 4939 . + . ID=g9796.t1.exon8;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 4836 4939 . + 2 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . exon 5088 5336 . + . ID=g9796.t1.exon9;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . CDS 5088 5219 . + 0 ID=cds.g9796.t1;Parent=g9796.t1 NODE_990_length_15006_cov_54.9688 . three_prime_UTR 5220 5336 . + . ID=g9796.t1.utr3p1;Parent=g9796.t1 #PROT g9796.t1 g9796 MKALILVGGFGTRLRPLTLTLPKPLVEFGNKAMLLHQVEALAQAGVKHIILAVNYRAEVMERSLRHFEQQYGVKISTSLESEPMGTAGPLALAREALLEGGEPFFVLNSDIICDFPFREMVEFHKAHGKEGTIVVTKVDEPSKYGVVVSGPDGAIQKFVEKPKVFVSNKINAGLYLFSPAILNRIQLRPTSIEKEIFPEMAGDGNLFAMNLEGFWMDVGQPKDFLTGTGLYLASLASKEPARLRTGDGFVGNVLVDATATIGKDCLIGPNVVIGPNVVIEDGARIARSTILDGATICSHAWVHSSIVGWRSVVGQWVRMEGVSVLGEDVRINDELYINGGKVLPHKQIGESVPEPQIIM* # PASA_UPDATE: g9799.t1, single gene model update, valid-1, status:[pasa:asmbl_10242,status:3], valid-1 NODE_990_length_15006_cov_54.9688 . gene 11640 13962 . + . ID=g9799;Name=g9799.t1 NODE_990_length_15006_cov_54.9688 . mRNA 11640 13962 . + . ID=g9799.t1;Parent=g9799;Name=g9799.t1 NODE_990_length_15006_cov_54.9688 . five_prime_UTR 11640 11742 . + . ID=g9799.t1.utr5p1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 11640 11849 . + . ID=g9799.t1.exon1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 11743 11849 . + 0 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 12013 12098 . + . ID=g9799.t1.exon2;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 12013 12098 . + 1 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 12208 12383 . + . ID=g9799.t1.exon3;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 12208 12383 . + 2 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 12517 12627 . + . ID=g9799.t1.exon4;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 12517 12627 . + 0 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 12911 12976 . + . ID=g9799.t1.exon5;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 12911 12976 . + 0 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 13379 13560 . + . ID=g9799.t1.exon6;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 13379 13560 . + 0 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . exon 13816 13962 . + . ID=g9799.t1.exon7;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . CDS 13816 13825 . + 1 ID=cds.g9799.t1;Parent=g9799.t1 NODE_990_length_15006_cov_54.9688 . three_prime_UTR 13826 13962 . + . ID=g9799.t1.utr3p1;Parent=g9799.t1 #PROT g9799.t1 g9799 MAVRAAFENTNEIGVFAKLTNNYCLVAVGAAENFYSVFEGELADVIPVVHTSIAGCRIIGRLTAGNRNGLLVPSTTTDQELQHIRNSLPDTVVIQRVEERLSALGNVIACNDYVALVHPDIDRETEEIIADVLKVDVFRQTVADHVLVGSYCQFSNQGGLVHPRTSIEDQDELSSLLQVPLVAGTVNRGSDVIGAGLVVNDWSAFCGLDTTSTELSVIESIFKLQQGRPNAIVNEMRDSLIEGMV* # PASA_UPDATE: g9798.t1, single gene model update, valid-1, status:[pasa:asmbl_10243,status:3], valid-1 NODE_990_length_15006_cov_54.9688 . gene 7668 11285 . - . ID=g9798;Name=g9798.t1 NODE_990_length_15006_cov_54.9688 . mRNA 7668 11285 . - . ID=g9798.t1;Parent=g9798;Name=g9798.t1 NODE_990_length_15006_cov_54.9688 . five_prime_UTR 11243 11285 . - . ID=g9798.t1.utr5p1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . five_prime_UTR 11136 11155 . - . ID=g9798.t1.utr5p2;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 11243 11285 . - . ID=g9798.t1.exon1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 11111 11155 . - . ID=g9798.t1.exon2;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 11111 11135 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 10859 10936 . - . ID=g9798.t1.exon3;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 10859 10936 . - 2 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 10593 10643 . - . ID=g9798.t1.exon4;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 10593 10643 . - 2 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 10241 10368 . - . ID=g9798.t1.exon5;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 10241 10368 . - 2 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 9976 10071 . - . ID=g9798.t1.exon6;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 9976 10071 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 9452 9556 . - . ID=g9798.t1.exon7;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 9452 9556 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 9020 9145 . - . ID=g9798.t1.exon8;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 9020 9145 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 8580 8730 . - . ID=g9798.t1.exon9;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 8580 8730 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 8243 8364 . - . ID=g9798.t1.exon10;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 8243 8364 . - 2 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . exon 7668 8103 . - . ID=g9798.t1.exon11;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . CDS 7930 8103 . - 0 ID=cds.g9798.t1;Parent=g9798.t1 NODE_990_length_15006_cov_54.9688 . three_prime_UTR 7668 7929 . - . ID=g9798.t1.utr3p1;Parent=g9798.t1 #PROT g9798.t1 g9798 MSHASGITVSQELADRFAKSHDASIRAIKVSILDEKLVEGAVESPSGSWEDDFDKTVLKQLEEKRPCYILYRTDNQGALGYEWILICYVPDWAPVREKMIYASTRSSLRREFADGRIKDELFGTTKDDVSLEGYRKHVKSQNAPPPLSASEEEIKEIKSKECGVDIGASTKKSFATGVFFPLSAEAREKLEKFRDRFISYVQLAIDTEKETLELAVADNTSAADLSSKVPNNSPRYHFFLFKHDFEGERLESHLFIYSCPGYAAKIKERMLYSSCKAPLLSVAESELGIEFVKKLEISEPSELTEDFVMEELHPRKEEAKKGFSRPQRPGKGGRKLVGSKSQENLVDSDAS* # ORIGINAL: g9795.t1 original gene structure, not modified by PASA NODE_990_length_15006_cov_54.9688 AUGUSTUS gene 593 1800 . + . ID=g9795;Name=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS mRNA 593 1800 . + . ID=g9795.t1;Parent=g9795;Name=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS exon 593 662 . + . ID=g9795.t1.exon1;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS CDS 593 662 . + 0 ID=cds.g9795.t1;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS exon 828 910 . + . ID=g9795.t1.exon2;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS CDS 828 910 . + 2 ID=cds.g9795.t1;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS exon 1002 1112 . + . ID=g9795.t1.exon3;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS CDS 1002 1112 . + 0 ID=cds.g9795.t1;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS exon 1420 1489 . + . ID=g9795.t1.exon4;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS CDS 1420 1489 . + 0 ID=cds.g9795.t1;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS exon 1646 1800 . + . ID=g9795.t1.exon5;Parent=g9795.t1 NODE_990_length_15006_cov_54.9688 AUGUSTUS CDS 1646 1800 . + 2 ID=cds.g9795.t1;Parent=g9795.t1 #PROT g9795.t1 g9795 MIKQFLTDVYWGTLDYLIIDTPPGTSDEHISVVENLRGLNPSGAVVVTTPQAVAVADVRKELNFCKRAGLRVLGVVENMSGFICPCCAEVSYVFSTGGGEQMATDFGVPFLGRIPLDPLLTKCIEEGKNFADVFPESATRSSIDAIAAPLLALEPRPLLGAQ* # PASA_UPDATE: g9797.t1, single gene model update, valid-1, status:[pasa:asmbl_10241,status:3], valid-1 NODE_990_length_15006_cov_54.9688 . gene 6274 7496 . + . ID=g9797;Name=g9797.t1 NODE_990_length_15006_cov_54.9688 . mRNA 6274 7496 . + . ID=g9797.t1;Parent=g9797;Name=g9797.t1 NODE_990_length_15006_cov_54.9688 . five_prime_UTR 6274 6472 . + . ID=g9797.t1.utr5p1;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . exon 6274 6548 . + . ID=g9797.t1.exon1;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . CDS 6473 6548 . + 0 ID=cds.g9797.t1;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . exon 6700 6972 . + . ID=g9797.t1.exon2;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . CDS 6700 6972 . + 2 ID=cds.g9797.t1;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . exon 7086 7496 . + . ID=g9797.t1.exon3;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . CDS 7086 7375 . + 2 ID=cds.g9797.t1;Parent=g9797.t1 NODE_990_length_15006_cov_54.9688 . three_prime_UTR 7376 7496 . + . ID=g9797.t1.utr3p1;Parent=g9797.t1 #PROT g9797.t1 g9797 MQPFGHDRTWAVAIAGLLCCLQLISALPLNIGDRIAALNPPAEFVGEFICCQAGDLGENPHSHRPCRYNEAYTASSWSSWQEQGLSNATSLVLGARCCSTGYAKPSGDAQYPLACTDAPAHVPIPLGGFGCSSEHPCGANAVCASRLLDDPVFEWLSSMRCECASWDDEAVDGRCEWSFGAVPAGRLAVSIAACASGAAVPAPEDSHPFRCL* # ORIGINAL: g5325.t1 original gene structure, not modified by PASA NODE_736_length_18379_cov_41.7324 AUGUSTUS gene 12226 17207 . + . ID=g5325;Name=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS mRNA 12226 17207 . + . ID=g5325.t1;Parent=g5325;Name=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 12226 12257 . + . ID=g5325.t1.exon1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 12226 12257 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 12385 12498 . + . ID=g5325.t1.exon2;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 12385 12498 . + 1 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 12674 12833 . + . ID=g5325.t1.exon3;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 12674 12833 . + 1 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 13086 13163 . + . ID=g5325.t1.exon4;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 13086 13163 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 13281 13883 . + . ID=g5325.t1.exon5;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 13281 13883 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 13994 14137 . + . ID=g5325.t1.exon6;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 13994 14137 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 14249 14466 . + . ID=g5325.t1.exon7;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 14249 14466 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 14649 14763 . + . ID=g5325.t1.exon8;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 14649 14763 . + 1 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 14937 15037 . + . ID=g5325.t1.exon9;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 14937 15037 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 15225 15294 . + . ID=g5325.t1.exon10;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 15225 15294 . + 1 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 15742 15903 . + . ID=g5325.t1.exon11;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 15742 15903 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 16248 16290 . + . ID=g5325.t1.exon12;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 16248 16290 . + 0 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 16422 16434 . + . ID=g5325.t1.exon13;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 16422 16434 . + 2 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 16601 16764 . + . ID=g5325.t1.exon14;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 16601 16764 . + 1 ID=cds.g5325.t1;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 16972 17207 . + . ID=g5325.t1.exon15;Parent=g5325.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 16972 17207 . + 2 ID=cds.g5325.t1;Parent=g5325.t1 #PROT g5325.t1 g5325 MEHNAIRLWQLAQCRAEAAVEEARPVDASGAVIAQLLCLEYAKAQCLTGRWGGGNPFLSVAAVEREALDMHASLCDAPEVDRGLNRHADVIACLLKRQKTAREFTPWSITTGIDDILALEESRAVGASTLSTTEHDDSLASLVKRCGSRQPTAQPPLQSTIAKLGTNEAPQVAPRPHNPFKPSRDSALSAGSGAAWQQQQQQRQQQHQQQQPQQQSQQTAIPQHFPSHPPPEQHPHHRQSALPPVSSAAGNPRDTRDTLMSGPGGIRGTQSHGGTSAGAGTFDGRPYGGFDGASLPRQPATSAPPLLRTDNRAADSRRTHEPPNGYTGHEGGYDARNGPDAHRGRPAHTGGGADRDDRDMDAQNGKPNPFVTAREQLVMNNNQKNSQRGGGQYGSGGQYGGGGGNSSSSSTSAFAARRSLGARQRPPTNGKFVPPFRQNDDDGGGGACFGSRQGQAASKPGQKSDPNEFVDERLKNIDPKMIELITNEIMDNGPPVDWNDIAGLEFAKKTIMEIVVWPMQRPDIFHGLRGPPKGLLLFGPPGTGKVGEGEKMVRALFAVARCNQPAVIFIDEIDSLLSQRSESEHEASRRIKTEFLVQLDGAATSSEDRLLVVGATNRPQELDEAARRRLVKRLYVPLPDNCARRQIIANLLSKQSHTLAEDETADICRLTEGYSGADMTNLCKEAALGPIRSIMDIRNISADQVRPIAHCDFVSALRQVRASVSPKDLDGYIQWNGLFGSCPIPPCDNP* # ORIGINAL: g5323.t1 original gene structure, not modified by PASA NODE_736_length_18379_cov_41.7324 AUGUSTUS gene 6461 8041 . - . ID=g5323;Name=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS mRNA 6461 8041 . - . ID=g5323.t1;Parent=g5323;Name=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 7640 8041 . - . ID=g5323.t1.exon1;Parent=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 7640 8041 . - 0 ID=cds.g5323.t1;Parent=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 7042 7250 . - . ID=g5323.t1.exon2;Parent=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 7042 7250 . - 0 ID=cds.g5323.t1;Parent=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS exon 6461 6800 . - . ID=g5323.t1.exon3;Parent=g5323.t1 NODE_736_length_18379_cov_41.7324 AUGUSTUS CDS 6461 6800 . - 1 ID=cds.g5323.t1;Parent=g5323.t1 #PROT g5323.t1 g5323 MVGRCANTTSVRLSGSPERDRDRYWRGVLLVLQRLDNLASLSFASIPVEVLEKVASHLPKLQSLVAEELQFGGRVVDGMAWLDFGCLASMKWLRVLRLYGNTLFGAAAFSFAFSHHSGLEGLQAIGTLSKLESLRIVGLFASPEDFHCLGSLTSLKDLDMSASSWCAPNFSLLGSLPSIETLTLRGGAHRSDSMLADVLPKMKRLRELRLRNFDFHDALHDAVAHHPSIRLLDVRMACRSERSNANILRLIGSSDGELPGVTPLSETNPVPPSTSIVVRWTLQEAPSGSLAIVPGTGFNLGELQTYAASKGHAVCV* # PASA_UPDATE: g5324.t1, single gene model update, valid-1, status:[pasa:asmbl_9117,status:12], valid-1 NODE_736_length_18379_cov_41.7324 . gene 9496 10645 . - . ID=g5324;Name=g5324.t1 NODE_736_length_18379_cov_41.7324 . mRNA 9496 10645 . - . ID=g5324.t1;Parent=g5324;Name=g5324.t1 NODE_736_length_18379_cov_41.7324 . exon 10172 10645 . - . ID=g5324.t1.exon1;Parent=g5324.t1 NODE_736_length_18379_cov_41.7324 . CDS 10172 10645 . - 0 ID=cds.g5324.t1;Parent=g5324.t1 NODE_736_length_18379_cov_41.7324 . exon 9496 9986 . - . ID=g5324.t1.exon2;Parent=g5324.t1 NODE_736_length_18379_cov_41.7324 . CDS 9612 9986 . - 0 ID=cds.g5324.t1;Parent=g5324.t1 NODE_736_length_18379_cov_41.7324 . three_prime_UTR 9496 9611 . - . ID=g5324.t1.utr3p1;Parent=g5324.t1 #PROT g5324.t1 g5324 MASKVVLITGTSSGVGLSAAILFAKAGYTSVATMRDLSKATALEERAKSEGVKVDVRQLDVQDNKSIADCVASVVKDHGRIDVLVNNAGAGCVGIFEELPESELRKCFEVNFFGVWATTKAVVPVMRTQKSGHIINITSVGGIFGQPFNEAYCAAKFAVEGMTESMSALLLQHGIKVSLVEPGPINTEFVNNVSRPQSITEEPIYKACFESYIGGTKHVFATFGQTGDEVAKVIVDAAADEKPHLRYQTSEMSKGIAAKLLTDITGDSRVLMSSARLPPLPQ* # PASA_UPDATE: g5322.t1, single gene model update, valid-1, status:[pasa:asmbl_9119,status:3], valid-1 # PASA_UPDATE: g5322.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9120,status:12], valid-1 NODE_736_length_18379_cov_41.7324 . gene 2182 6012 . + . ID=g5322;Name=g5322.t1 NODE_736_length_18379_cov_41.7324 . mRNA 2182 6012 . + . ID=g5322.t1;Parent=g5322;Name=g5322.t1 NODE_736_length_18379_cov_41.7324 . five_prime_UTR 2182 2296 . + . ID=g5322.t1.utr5p1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 2182 2776 . + . ID=g5322.t1.exon1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . CDS 2297 2776 . + 0 ID=cds.g5322.t1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 3073 3570 . + . ID=g5322.t1.exon2;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . CDS 3073 3570 . + 0 ID=cds.g5322.t1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 3858 4133 . + . ID=g5322.t1.exon3;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . CDS 3858 4133 . + 0 ID=cds.g5322.t1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 4354 4448 . + . ID=g5322.t1.exon4;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . CDS 4354 4448 . + 0 ID=cds.g5322.t1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 4849 5287 . + . ID=g5322.t1.exon5;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . CDS 4849 5026 . + 1 ID=cds.g5322.t1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . exon 5486 6012 . + . ID=g5322.t1.exon6;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . three_prime_UTR 5027 5287 . + . ID=g5322.t1.utr3p1;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . three_prime_UTR 5486 6012 . + . ID=g5322.t1.utr3p2;Parent=g5322.t1 NODE_736_length_18379_cov_41.7324 . mRNA 2182 6012 . + . ID=g5322.t1.1.5b6be70c;Parent=g5322;Name=g5322.t1 NODE_736_length_18379_cov_41.7324 . five_prime_UTR 2182 2296 . + . ID=g5322.t1.1.5b6be70c.utr5p1;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 2182 2776 . + . ID=g5322.t1.1.5b6be70c.exon1;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 2297 2776 . + 0 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 3073 3570 . + . ID=g5322.t1.1.5b6be70c.exon2;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 3073 3570 . + 0 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 3858 4133 . + . ID=g5322.t1.1.5b6be70c.exon3;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 3858 4133 . + 0 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 4354 4448 . + . ID=g5322.t1.1.5b6be70c.exon4;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 4354 4448 . + 0 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 4849 4916 . + . ID=g5322.t1.1.5b6be70c.exon5;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 4849 4916 . + 1 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 5245 5287 . + . ID=g5322.t1.1.5b6be70c.exon6;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 5245 5287 . + 2 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . exon 5486 6012 . + . ID=g5322.t1.1.5b6be70c.exon7;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . CDS 5486 5642 . + 1 ID=cds.g5322.t1.1.5b6be70c;Parent=g5322.t1.1.5b6be70c NODE_736_length_18379_cov_41.7324 . three_prime_UTR 5643 6012 . + . ID=g5322.t1.1.5b6be70c.utr3p1;Parent=g5322.t1.1.5b6be70c #PROT g5322.t1 g5322 MATSPKSSPAKMSPLKSPLRKSPLVSPSKKRTACASAIDAKDDGHAAFMRGLVISIAPKGIPFGQISVFERQCRKFGASIGVGLTGDSLTHIVGNATWPVVRVRDAYGVHARDIPDGVRFVSTNWLSDSLAQRVLKGERAYLLSAPRVAHESPVKKAASQEAVSQSSEDQKQQSPGSLARNNPFGIPEVECMRISRLDAPVPNVGLATELEKLERFYGDTGDSMRALSYHRAAQAIRQCPIRIQSGKEAKQLPFVSDKTAVLVQEYVDTGCISKADALYDSEYGQVMRMFNNIYGVGPRMADKWFHKGHRTLADVLEHEQLSDVQKIGIELYDDFAARIPRSEVREFEKIFREHADRIDPSIVHVICGGYRRGKEDSGDIDMIVTHPISGMEKCLLDKLVDSLRSDGIITHQLQLHTKCTGPQKPTELMTASAHARSHAKGFDSHEKFLGVYQLPGRPHRRLDIIVAPISEWGGFQRPNLMHSLSHKSNSICTFFKLHSNYASDCPQI* #PROT g5322.t1.1.5b6be70c g5322 MATSPKSSPAKMSPLKSPLRKSPLVSPSKKRTACASAIDAKDDGHAAFMRGLVISIAPKGIPFGQISVFERQCRKFGASIGVGLTGDSLTHIVGNATWPVVRVRDAYGVHARDIPDGVRFVSTNWLSDSLAQRVLKGERAYLLSAPRVAHESPVKKAASQEAVSQSSEDQKQQSPGSLARNNPFGIPEVECMRISRLDAPVPNVGLATELEKLERFYGDTGDSMRALSYHRAAQAIRQCPIRIQSGKEAKQLPFVSDKTAVLVQEYVDTGCISKADALYDSEYGQVMRMFNNIYGVGPRMADKWFHKGHRTLADVLEHEQLSDVQKIGIELYDDFAARIPRSEVREFEKIFREHADRIDPSIVHVICGGYRRGKEDSGDIDMIVTHPISGMEKCLLDKLVDSLRSDGIITHQLQLHTKCTGPQKPTELMTASAHARSHAKGFDSHEKFLGVYQLPGRPHRRLDIIVAPISEWAFCVLGWSGSQHFERSIRDLAKKKGFHLSSHGLERIATGEFIPCLTERQIFDALGLEYREPEERNC* # PASA_UPDATE: g5321.t1, single gene model update, valid-1, status:[pasa:asmbl_9121,status:12], valid-1 NODE_736_length_18379_cov_41.7324 . gene 129 1934 . - . ID=g5321;Name=g5321.t1 NODE_736_length_18379_cov_41.7324 . mRNA 129 1934 . - . ID=g5321.t1;Parent=g5321;Name=g5321.t1 NODE_736_length_18379_cov_41.7324 . five_prime_UTR 1815 1934 . - . ID=g5321.t1.utr5p1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 1679 1934 . - . ID=g5321.t1.exon1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 1679 1814 . - 0 ID=cds.g5321.t1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 1399 1494 . - . ID=g5321.t1.exon2;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 1399 1494 . - 2 ID=cds.g5321.t1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 1082 1242 . - . ID=g5321.t1.exon3;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 1082 1242 . - 2 ID=cds.g5321.t1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 864 965 . - . ID=g5321.t1.exon4;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 864 965 . - 0 ID=cds.g5321.t1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 464 625 . - . ID=g5321.t1.exon5;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 464 625 . - 0 ID=cds.g5321.t1;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . exon 129 185 . - . ID=g5321.t1.exon6;Parent=g5321.t1 NODE_736_length_18379_cov_41.7324 . CDS 129 185 . - 0 ID=cds.g5321.t1;Parent=g5321.t1;3_prime_partial=true #PROT g5321.t1 g5321 MVAAYLYLAAAAVVLVAIVLLGLVGKNAQKTKDQEQMVAALLGDEDDEDDAVATGGARRPRTARNRLRAAAQRRAEEVESPEVRRAPAADAPLMGSDVEDDDDAVDANGKKIGAKKAAKLAAKEDKKAQRELMEAQREDKKRRDALLDEERKKKEAEEKAVKDAEAETERKRLEEIARQEEEEYQKLKASFTVEDAGSGESEIMAESQSLLQDFVDYVKNKKVVLLEDLAAHFKLRTQ # PASA_UPDATE: g5326.t1, single gene model update, valid-1, status:[pasa:asmbl_9118,status:12], valid-1 NODE_736_length_18379_cov_41.7324 . gene 17518 18252 . - . ID=g5326;Name=g5326.t1 NODE_736_length_18379_cov_41.7324 . mRNA 17518 18252 . - . ID=g5326.t1;Parent=g5326;Name=g5326.t1 NODE_736_length_18379_cov_41.7324 . exon 17518 18252 . - . ID=g5326.t1.exon1;Parent=g5326.t1 NODE_736_length_18379_cov_41.7324 . CDS 17869 18252 . - 0 ID=cds.g5326.t1;Parent=g5326.t1;5_prime_partial=true NODE_736_length_18379_cov_41.7324 . three_prime_UTR 17518 17868 . - . ID=g5326.t1.utr3p1;Parent=g5326.t1 #PROT g5326.t1 g5326 DIVGEGERVQELRQVLQISLPRRNYIVLEYLMRFLNDVVSHASENLMTTANLAIVFGPNLIWSQTQASSLSAMGKINVVVNLLIKHYTVLFAKEDAAETQRREEEEAMIRRLGGEDNAEVDLGGGSS* # ORIGINAL: g13712.t1 original gene structure, not modified by PASA NODE_3186_length_4072_cov_47.4088 AUGUSTUS gene 231 713 . - . ID=g13712;Name=g13712.t1 NODE_3186_length_4072_cov_47.4088 AUGUSTUS mRNA 231 713 . - . ID=g13712.t1;Parent=g13712;Name=g13712.t1 NODE_3186_length_4072_cov_47.4088 AUGUSTUS exon 231 713 . - . ID=g13712.t1.exon1;Parent=g13712.t1 NODE_3186_length_4072_cov_47.4088 AUGUSTUS CDS 231 713 . - 0 ID=cds.g13712.t1;Parent=g13712.t1 #PROT g13712.t1 g13712 MTLWRVRFRVISVASNGRPDVVKFAFSPLVNVSLDASVALALNGPDTDGDMMAGFVSVRHLYRHDTTTGDGTYAAAVCGALTSGAVAALPNGRYLHPGFTLTSITLAVSGVGRVEIASAVSVSGRTGTERLSGSGLLAAGTEQAARAHYVLQERTSPSRA* # ORIGINAL: g5311.t1 original gene structure, not modified by PASA NODE_3826_length_2675_cov_43.9627 AUGUSTUS gene 438 2342 . - . ID=g5311;Name=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS mRNA 438 2342 . - . ID=g5311.t1;Parent=g5311;Name=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS exon 2080 2342 . - . ID=g5311.t1.exon1;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS CDS 2080 2342 . - 0 ID=cds.g5311.t1;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS exon 1610 1868 . - . ID=g5311.t1.exon2;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS CDS 1610 1868 . - 1 ID=cds.g5311.t1;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS exon 1237 1419 . - . ID=g5311.t1.exon3;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS CDS 1237 1419 . - 0 ID=cds.g5311.t1;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS exon 946 1041 . - . ID=g5311.t1.exon4;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS CDS 946 1041 . - 0 ID=cds.g5311.t1;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS exon 438 755 . - . ID=g5311.t1.exon5;Parent=g5311.t1 NODE_3826_length_2675_cov_43.9627 AUGUSTUS CDS 438 755 . - 0 ID=cds.g5311.t1;Parent=g5311.t1 #PROT g5311.t1 g5311 SASGIIEYKAQSPDEAALVEAARNFGFVFLSRSPTTVTVDLLGVQETYQLLTILEFNSDRKRMSVILRCPDGKLRLYCKGADSVIYERLAKAATVQDMCDTTTLHLEKFASDGLRTLCLAFRELTESEYTAWTAKHHAASIALHDREEKLNEVGDLIEKDLILLGATAIEDKLQVGVPNCISTLARAGIKIWVLTGDKQETAINIGFAARLLRQDMNLCIINATTMEECAQQIEQTITVRSSPSADAEKALVIDGVSLNFALQSQLQERFLEAASSCTSVICCRVSPLQKALVVQLVKIYKKAVTLAIGDGANDVSMIQAAHIGVGISGHEGRQAVLASDFAFAQFRYPPHDKHALYCLFWCCGLVGALFRE* # ORIGINAL: g2988.t1 original gene structure, not modified by PASA NODE_6772_length_512_cov_69.7162_potentialcontaminant AUGUSTUS gene 2 512 . + . ID=g2988;Name=g2988.t1 NODE_6772_length_512_cov_69.7162_potentialcontaminant AUGUSTUS mRNA 2 512 . + . ID=g2988.t1;Parent=g2988;Name=g2988.t1 NODE_6772_length_512_cov_69.7162_potentialcontaminant AUGUSTUS exon 2 512 . + . ID=g2988.t1.exon1;Parent=g2988.t1 NODE_6772_length_512_cov_69.7162_potentialcontaminant AUGUSTUS CDS 2 512 . + 2 ID=cds.g2988.t1;Parent=g2988.t1 #PROT g2988.t1 g2988 VACQLDFLATSWRFATTFNDLAVDQTHDLSDNITALDDEFISFLNVFEFRVMKYFYSTWYLFPVAYDYASANEADLTLGATYTKLKNFLNKTIFNAGNLLRHLMDRPTIEEIVDSYSTAVAAAHNAAATVTPSIADAPNVTTGVKEMIYIRFAAKYNAVTQPFYIFSSD # ORIGINAL: g3360.t1 original gene structure, not modified by PASA NODE_3087_length_4354_cov_40.7366 AUGUSTUS gene 120 2868 . - . ID=g3360;Name=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS mRNA 120 2868 . - . ID=g3360.t1;Parent=g3360;Name=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS exon 2775 2868 . - . ID=g3360.t1.exon1;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS CDS 2775 2868 . - 0 ID=cds.g3360.t1;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS exon 2530 2591 . - . ID=g3360.t1.exon2;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS CDS 2530 2591 . - 2 ID=cds.g3360.t1;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS exon 2088 2441 . - . ID=g3360.t1.exon3;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS CDS 2088 2441 . - 0 ID=cds.g3360.t1;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS exon 1279 1843 . - . ID=g3360.t1.exon4;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS CDS 1279 1843 . - 0 ID=cds.g3360.t1;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS exon 120 1067 . - . ID=g3360.t1.exon5;Parent=g3360.t1 NODE_3087_length_4354_cov_40.7366 AUGUSTUS CDS 120 1067 . - 2 ID=cds.g3360.t1;Parent=g3360.t1 #PROT g3360.t1 g3360 MAEGTSFPTRHILPKSEIAADAFIQAHPQYDGRGVIIAIFDTGVDPAAPGLQVTSDGKPKIVDIVDATGSGDVDTATERTLTAEGTVDGLTGRTLRLPASWTIPGGKCRVGYKRLYELCPKPLVDRLQKGDRKKAWDASQLQLASTLSRQLREWESQHPTPSKEDKKKKEELEARVEQLAALEKSFEDLGPVCDVVAFHDGTHWHAAIDLTETGDFSNAKAMVDYRINREFEFFGIEDRMSYSVNIYDNGDIVSIVTNCGSHGTHVAGIAAAHHPEDLSRNGISPGAQIVSVKIGDTRLGSMETGTGIVRGVLAAMTAGCHVINMSYGEATKVANVGRCIDVCSDIVWRKNVVFVSSAGNNGPALSTVGCPGGTSTALIGVGAFVSTDMMDVEYSMYDQPHGMQYTWSSRGPTTDGDAGVSISAAGGAIAPVPQWTLKGVQLMNGTSMSSPSASGAVALILSGLLAEGVPYTPYSIRRSLENTARPIATGTDVFGHGKGMIHVTDAFDFAVRAGKQHARWHLTAIESSFGERGGARGLYLREPQEADRACEHKVTLEPRFAEDTPTDVKVAYEVRLSLSSTAPWLRVPPNLVLMNEARTFGVYVDPTQLPPGAHSAEIVGHDSDAPAEGPLVRIAVTVIRTEAANTLDWASETAFGPGQIERTFFAVPECATWA # PASA_UPDATE: g3361.t1, single gene model update, valid-1, status:[pasa:asmbl_5536,status:12], valid-1 NODE_3087_length_4354_cov_40.7366 . gene 3412 4200 . + . ID=g3361;Name=g3361.t1 NODE_3087_length_4354_cov_40.7366 . mRNA 3412 4200 . + . ID=g3361.t1;Parent=g3361;Name=g3361.t1 NODE_3087_length_4354_cov_40.7366 . five_prime_UTR 3412 3545 . + . ID=g3361.t1.utr5p1;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . exon 3412 3563 . + . ID=g3361.t1.exon1;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . CDS 3546 3563 . + 0 ID=cds.g3361.t1;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . exon 3781 3957 . + . ID=g3361.t1.exon2;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . CDS 3781 3957 . + 0 ID=cds.g3361.t1;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . exon 4105 4200 . + . ID=g3361.t1.exon3;Parent=g3361.t1 NODE_3087_length_4354_cov_40.7366 . CDS 4105 4200 . + 0 ID=cds.g3361.t1;Parent=g3361.t1;3_prime_partial=true #PROT g3361.t1 g3361 MADFVVEDGDIPFEEDILRNPYSVKSWWRYIDHKKNAPRAVRNIIFERAIKELPGSYKLWYNYLKERRLQVKGKCITDPAFEDVNNAHERALVFMHK # ORIGINAL: g12540.t1 original gene structure, not modified by PASA NODE_2946_length_4665_cov_42.5048 AUGUSTUS gene 917 4471 . - . ID=g12540;Name=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS mRNA 917 4471 . - . ID=g12540.t1;Parent=g12540;Name=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 4409 4471 . - . ID=g12540.t1.exon1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 4409 4471 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 4133 4222 . - . ID=g12540.t1.exon2;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 4133 4222 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 3762 3976 . - . ID=g12540.t1.exon3;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 3762 3976 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 3137 3519 . - . ID=g12540.t1.exon4;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 3137 3519 . - 1 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 2939 2991 . - . ID=g12540.t1.exon5;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 2939 2991 . - 2 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 2660 2767 . - . ID=g12540.t1.exon6;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 2660 2767 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 2443 2478 . - . ID=g12540.t1.exon7;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 2443 2478 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 2200 2293 . - . ID=g12540.t1.exon8;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 2200 2293 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 1904 1987 . - . ID=g12540.t1.exon9;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 1904 1987 . - 2 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 1727 1761 . - . ID=g12540.t1.exon10;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 1727 1761 . - 2 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 1410 1492 . - . ID=g12540.t1.exon11;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 1410 1492 . - 0 ID=cds.g12540.t1;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS exon 917 1283 . - . ID=g12540.t1.exon12;Parent=g12540.t1 NODE_2946_length_4665_cov_42.5048 AUGUSTUS CDS 917 1283 . - 1 ID=cds.g12540.t1;Parent=g12540.t1 #PROT g12540.t1 g12540 MYLCLVKIIGRAPKTHVDVALRLTRGDGPQRRAVLALYIKHDLLGCMGSPQSSLYSLLGSSAEVVRENAARLMNAVASFCHGRAYILRSPHAMDTLRAALVAEHADTIARQNVLGTLQKLSLRRAAQAAMIQAGVIAWLAATLGDLEGLSEYSIEYAAALLMNLSLRTQGRRRCVADAGGMLRLLSELLEHENVQVRTYVNGTLYSLLSNPSAREEARAMGMDEMLRTLMEVSDENMARQLQYILDQLNSDADEGDEGSSDHGEDDAEDEDDADDVFLGLNENESVVAGQTELSGERLLSSEYATLEEAAKIKKRKTVIGHMAIPDHPLSRPTTPSVRPQTADHDASDTPSARLPQRAVSRNGRSAASSMADISESIALDSSTTLDRRPTSGASNRGSRAQSVEPMNPKPPAALDGTHDYETVFSTRARIARTPLTGQPRPPLNPDDPYDDDVDRSRQGESDASPRPQNTRGGTNGTQRALAKSTITTTTTATTAATAKPGAAKKPAAASKAAAGTGGAPNAAVPKVQKSVRLSIN* # PASA_UPDATE: g12539.t1, single gene model update, valid-1, status:[pasa:asmbl_5283,status:12], valid-1 NODE_2946_length_4665_cov_42.5048 . gene 100 1681 . + . ID=g12539;Name=g12539.t1 NODE_2946_length_4665_cov_42.5048 . mRNA 100 1681 . + . ID=g12539.t1;Parent=g12539;Name=g12539.t1 NODE_2946_length_4665_cov_42.5048 . five_prime_UTR 100 101 . + . ID=g12539.t1.utr5p1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . exon 100 222 . + . ID=g12539.t1.exon1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . CDS 102 222 . + 0 ID=cds.g12539.t1;Parent=g12539.t1;5_prime_partial=true NODE_2946_length_4665_cov_42.5048 . exon 319 371 . + . ID=g12539.t1.exon2;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . CDS 319 371 . + 2 ID=cds.g12539.t1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . exon 455 578 . + . ID=g12539.t1.exon3;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . CDS 455 578 . + 0 ID=cds.g12539.t1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . exon 711 818 . + . ID=g12539.t1.exon4;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . CDS 711 817 . + 2 ID=cds.g12539.t1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . exon 961 1681 . + . ID=g12539.t1.exon5;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . three_prime_UTR 818 818 . + . ID=g12539.t1.utr3p1;Parent=g12539.t1 NODE_2946_length_4665_cov_42.5048 . three_prime_UTR 961 1681 . + . ID=g12539.t1.utr3p2;Parent=g12539.t1 #PROT g12539.t1 g12539 ALMHVLHTTSDISRSYGERMSDSERDQINDLIVACYANLAMCLSKKGRWDRVVINCNKALEIQPNHAKALYRRAVAYIELGEIFKAESDLAAAGRAAPEEPAIRHELRRIAAMQSRSEEQAKQMYRAMFTPSEQ* # ORIGINAL: g12231.t1 original gene structure, not modified by PASA NODE_5154_length_993_cov_45.7342 AUGUSTUS gene 254 892 . + . ID=g12231;Name=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS mRNA 254 892 . + . ID=g12231.t1;Parent=g12231;Name=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS exon 254 352 . + . ID=g12231.t1.exon1;Parent=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS CDS 254 352 . + 0 ID=cds.g12231.t1;Parent=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS exon 447 571 . + . ID=g12231.t1.exon2;Parent=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS CDS 447 571 . + 0 ID=cds.g12231.t1;Parent=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS exon 730 892 . + . ID=g12231.t1.exon3;Parent=g12231.t1 NODE_5154_length_993_cov_45.7342 AUGUSTUS CDS 730 892 . + 1 ID=cds.g12231.t1;Parent=g12231.t1 #PROT g12231.t1 g12231 VRMQAHSAVPRYSGVFNAFATIFREEGVKGLWKGVGPTAQRAAVITSVELPVYDTCKRNLINRDIMKEGIAAHFASSFTAGFAGAIASNPIDVVKTRLMNQSSAASAAGGAAVYKGSLDCLAKVNEPA* # PASA_UPDATE: g6102.t1, single gene model update, valid-1, status:[pasa:asmbl_3954,status:3], valid-1 NODE_2294_length_6827_cov_44.3616 . gene 1662 3661 . + . ID=g6102;Name=g6102.t1 NODE_2294_length_6827_cov_44.3616 . mRNA 1662 3661 . + . ID=g6102.t1;Parent=g6102;Name=g6102.t1 NODE_2294_length_6827_cov_44.3616 . five_prime_UTR 1662 1770 . + . ID=g6102.t1.utr5p1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . exon 1662 1991 . + . ID=g6102.t1.exon1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . CDS 1771 1991 . + 0 ID=cds.g6102.t1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . exon 2084 2813 . + . ID=g6102.t1.exon2;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . CDS 2084 2813 . + 1 ID=cds.g6102.t1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . exon 2920 3272 . + . ID=g6102.t1.exon3;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . CDS 2920 3272 . + 0 ID=cds.g6102.t1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . exon 3420 3661 . + . ID=g6102.t1.exon4;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . CDS 3420 3615 . + 1 ID=cds.g6102.t1;Parent=g6102.t1 NODE_2294_length_6827_cov_44.3616 . three_prime_UTR 3616 3661 . + . ID=g6102.t1.utr3p1;Parent=g6102.t1 #PROT g6102.t1 g6102 MASSEVLPMPAGGTGDDCGACVAHLCLFSPPRTVENGAPDVIHLRDGVPIIVGRDRTTADVVFDSTRHPRMMSRTHATLTASKTRFGTLSIHIIDHASVNGVFVNQERIISRRQLNLNDTVSFGCGHLGRGLGFIYRVEYVLPAMTVAVPVGMTQGANLALDSVEEPRRLDQQPVEVPPVLAEVGSVAAVDSLLTDGNAHVHTGVHASEAPAAASQRRPRDESTSPLRSVRPRLVDLTASPSAAASEGGPSDSAERSPEAPFTVISLIGSDSGEGDNADFGSPAASGVSGLPTSDALCSQVHKSLGLEEEFTCVVCQDLMVKAVTLTCSHSFCGSCVDNWLSMGHRDCPMCRSPVTGKSPSRVIDNAIQRILASLSEEEKSRFEQRLRDLQASEDEALRQLKGLAELAKEKNKSFLDVSQQWSPKDRSVFAKGLRRYRGEARRFWCELTNLTPAFIASASQQQLAQAARNIGIQAASSSMVDLRKGLIAFIQNSGAADV* # PASA_UPDATE: g6101.t1, single gene model update, valid-1, status:[pasa:asmbl_3956,status:12], valid-1 NODE_2294_length_6827_cov_44.3616 . gene 72 816 . - . ID=g6101;Name=g6101.t1 NODE_2294_length_6827_cov_44.3616 . mRNA 72 816 . - . ID=g6101.t1;Parent=g6101;Name=g6101.t1 NODE_2294_length_6827_cov_44.3616 . five_prime_UTR 772 816 . - . ID=g6101.t1.utr5p1;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . exon 696 816 . - . ID=g6101.t1.exon1;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . CDS 696 771 . - 0 ID=cds.g6101.t1;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . exon 402 569 . - . ID=g6101.t1.exon2;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . CDS 402 569 . - 2 ID=cds.g6101.t1;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . exon 207 304 . - . ID=g6101.t1.exon3;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . CDS 207 304 . - 2 ID=cds.g6101.t1;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . exon 72 97 . - . ID=g6101.t1.exon4;Parent=g6101.t1 NODE_2294_length_6827_cov_44.3616 . CDS 72 97 . - 0 ID=cds.g6101.t1;Parent=g6101.t1;3_prime_partial=true #PROT g6101.t1 g6101 MSSFAPPANKRARTEADAAPQEHFVGIGKIPFSPDASADDFLVFRHYNAGEVVMGRTMEEWLRFSVCFWHTFRGSGADPFGFPTLHRSWEVSGGTLEEAKIRLRAAFEFFVKLGVKYWTFHD # PASA_UPDATE: g6103.t1, single gene model update, valid-1, status:[pasa:asmbl_3955,status:12],[pasa:asmbl_3957,status:12], valid-1 NODE_2294_length_6827_cov_44.3616 . gene 4266 6726 . + . ID=g6103;Name=g6103.t1 NODE_2294_length_6827_cov_44.3616 . mRNA 4266 6726 . + . ID=g6103.t1;Parent=g6103;Name=g6103.t1 NODE_2294_length_6827_cov_44.3616 . exon 4266 5244 . + . ID=g6103.t1.exon1;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . CDS 4266 5244 . + 0 ID=cds.g6103.t1;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . exon 5478 5599 . + . ID=g6103.t1.exon2;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . CDS 5478 5599 . + 2 ID=cds.g6103.t1;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . exon 5866 6010 . + . ID=g6103.t1.exon3;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . CDS 5866 6010 . + 0 ID=cds.g6103.t1;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . exon 6150 6239 . + . ID=g6103.t1.exon4;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . CDS 6150 6239 . + 2 ID=cds.g6103.t1;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . exon 6467 6726 . + . ID=g6103.t1.exon5;Parent=g6103.t1 NODE_2294_length_6827_cov_44.3616 . CDS 6467 6726 . + 2 ID=cds.g6103.t1;Parent=g6103.t1 #PROT g6103.t1 g6103 MAKIFVTLFRNDGLLDTSQAKPFYVLEGWPLSEAASQSHMRLFGTPNAHARLFTDMGVEIDDVAFIASQQPLVVSAGEPFRRVVHALKSAGMGQPNPGMHMPQTPAPMQDFVVQAASQQLAELERLIQNAYDQQANAQPINMQDVLSQLEMDLAGGALPHVASFSTSAQSAEAAFAPSHTPPASTGFGAGVGGGDFQSLFDSLQFPTASFDVPIVPQSSESPQSFNRDSSAASHVSYGYDGSPVNFVPSPHGSSSPPESPDDISGSFGMNPDGEWKNRGVADRVSSHKASEQRSREKLKQSIQELVLSIPTLSSMKNPSKATIIKKATDFVNHAKKTNSALLSENQRARQIVQDSQRESLSLQKRVQIASIMTVEITDLEMRYIFVDHMWEIVMGYQRHEVVGRVLKEVVGCPKCPLMVRRAAEIQRNIESGTTWRGVILGRRRDGRPFACEATIDPITDSKGKIFQYICSRKNFHVLTAKEATAVCQSLATAEKMAGDLAIGFSADADRLRVQSALGIDDTCMPGAMEVS* # ORIGINAL: g10700.t1 original gene structure, not modified by PASA NODE_935_length_15754_cov_44.124 AUGUSTUS gene 13724 15394 . - . ID=g10700;Name=g10700.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS mRNA 13724 15394 . - . ID=g10700.t1;Parent=g10700;Name=g10700.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS exon 13724 15394 . - . ID=g10700.t1.exon1;Parent=g10700.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS CDS 13724 15394 . - 0 ID=cds.g10700.t1;Parent=g10700.t1 #PROT g10700.t1 g10700 MHIIAPEQTAALAANAVNVECFTEYDEYGLADTEACYAVTRLKASAHDANGDSSRAPVDIVAVIDRSGSMGDQNKLELVKQTLEFVTKELTVRDRLAIVSYDDTIRIESPLTVMDYDGKESLLASVRGLHPGGSTNLSGGLLQGLRLMRDRTEAREVSSVLLFTDGLANAGLTQSSDICRMVLALLSNDDDAISKYAIDDADHGQTQQPRRQSFVQRAMNTMGINSPRRTSSPSAAPPALPQSQMQTATFAPPAAAPPSAPTRSPSKSPKAAKASPAAASAKQNASTVYTFGFGSDHDAMMLKAISETGRGMYYFIRGGEDIASSFADCLGGLLSTVAQGITLTLKPANGSAITKIHHVGKVSTVDGTSKIEICDLQSEEERNILFEVKLPARTAVGDEIAFVAEIEYFDVIAGVQRRQIGQAKVRRVSNVSTTRESSVEVDVHKGRMESIKAMDEAKAKADAGDLEAARERISSHISAMKSKKAATSAHAVSANIAEDLEKCLNGLQSTTAYRNEGNQMMSAKQQQWGHERSNECASGSAYETKARKVMKMKFMS* # PASA_UPDATE: g10699.t1, single gene model update, valid-1, status:[pasa:asmbl_10040,status:3], valid-1 NODE_935_length_15754_cov_44.124 . gene 11057 13168 . + . ID=g10699;Name=g10699.t1 NODE_935_length_15754_cov_44.124 . mRNA 11057 13168 . + . ID=g10699.t1;Parent=g10699;Name=g10699.t1 NODE_935_length_15754_cov_44.124 . five_prime_UTR 11057 11117 . + . ID=g10699.t1.utr5p1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . exon 11057 11194 . + . ID=g10699.t1.exon1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . CDS 11118 11194 . + 0 ID=cds.g10699.t1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . exon 11353 11750 . + . ID=g10699.t1.exon2;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . CDS 11353 11750 . + 1 ID=cds.g10699.t1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . exon 11984 12241 . + . ID=g10699.t1.exon3;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . CDS 11984 12241 . + 2 ID=cds.g10699.t1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . exon 12579 13168 . + . ID=g10699.t1.exon4;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . CDS 12579 12940 . + 2 ID=cds.g10699.t1;Parent=g10699.t1 NODE_935_length_15754_cov_44.124 . three_prime_UTR 12941 13168 . + . ID=g10699.t1.utr3p1;Parent=g10699.t1 #PROT g10699.t1 g10699 MVNITVGPPPASAVLSTDENGVPSFAFGRYSGPITDARMPASGWFSAYRLKEWEYLSLTTPTHFVALAVIQLGYVGQCFAYVVERGGDHRFYEYQAKSPLGRACTFAESSARGRTSWVSWNDRVEIDHSESGDVKVSISLPLWRRRAEDGGWEKKNLIGDYLFKIPDESMSLLFDLGNKTPAYTHKLAGVHASSGSLKWGEDGTTIAIDNRAMVSVDYTRSFARRETKWKWANFSGHDSHGNKIGMNLSADVYDTEDGHSMENAFFHNGKLYDLRGVKFEIPSTREGCATEQWRIIGKDSADRHSVDLTFTPAGMRHEDVNVLGIVSSKFCQPFGHFYGKITLGDTVVELDGVFGVVEDHLAVW* # ORIGINAL: g10697.t1 original gene structure, not modified by PASA NODE_935_length_15754_cov_44.124 AUGUSTUS gene 2770 4626 . - . ID=g10697;Name=g10697.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS mRNA 2770 4626 . - . ID=g10697.t1;Parent=g10697;Name=g10697.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS exon 2770 4626 . - . ID=g10697.t1.exon1;Parent=g10697.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS CDS 2770 4626 . - 0 ID=cds.g10697.t1;Parent=g10697.t1 #PROT g10697.t1 g10697 MSPSDASKSPIYGEIEPTLFATPAECQNTPNHSATLPITSVVQLTQETASKMFSHVYVKVGETTHRVVRTVSSPLDADGYRTLLRDLLEVHHHGTSIVDSSESAELQHISANPQESTGARRPTQPTVAWNLNSFILFANEYRRVLRECLANHTPVHNGVLSALLSNLWKVMPQSRKEEFKKQATDLRRIGVKARPKAVFRLPTTDNTSKSGARAIRGTGGAGILMATTSPALLGRLRASKVVTAPPVNSESNAAEFTSERRGSGVADVGDSGRPEQCSKSTADGVAGFTADMPAAGGVAAAAMSSPTPDVLRTRFGGALAGIGGNFDVDLRFSFSGPGPQTNSTGIDGPALSRHATGNRFQENAKGMSRSGGKIQNNKRVKKSSSARILTAELAEKKARKIDTCDNPAYPPGEKHGGLPAAQVRQSTAPAAGNGAAHSEQFWMLWDSPDPAVGQLESNVEDSRASKTRRSSDCRNFARGSGTSAPVQSTPDPFSDMHIWQPTSLLMASARSSTDQPHSAAHYRDLSAAAVAPPTVVAGNGAADSERPPAATRRLSFSVTNMADCNSTFYPEALRMYSREEGVSGTLAQFTNADGVVQAYWTMQVVQVSRPGSVANPTT* # ORIGINAL: g10698.t1 original gene structure, not modified by PASA NODE_935_length_15754_cov_44.124 AUGUSTUS gene 6969 8699 . - . ID=g10698;Name=g10698.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS mRNA 6969 8699 . - . ID=g10698.t1;Parent=g10698;Name=g10698.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS exon 6969 8699 . - . ID=g10698.t1.exon1;Parent=g10698.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS CDS 6969 8699 . - 0 ID=cds.g10698.t1;Parent=g10698.t1 #PROT g10698.t1 g10698 MTPRTAHLPSVAGCFHASPPSPASATQRSPNADLQQPKATPDVNDLKGVGYKALLAVLTADIECNFSQFESPGETERPCDESHQRPTIVDSATMRAPRQSKSAGSRANAGKPMSNKKSPVSNMKAVKGRPGRKWTMNSFMLFSIQYRKALRARFPGVTNGSLSEMLSNVWKEVPRERKEYFQAKAKEIRDAHRQAGPTREEPLDCFDDDMTTATKLSVANSVNQPETRHHSHSACDGQLQGLRVLHERQSAHVTDTGAAVTIDGRDAHMLATTHMENSPPLHDLVPTASERTATQMGSHWLENERDSGGIFSYNYNACGPPEPLARLYPLAHEDAREQPRILGFPWTYNSNAAFGWLRTGPDTEIDLESPFVRNFSGGATTLLNPGLPNDMHLHPCPLAWPGLPVATAAAARAGSSIDGFIALSDRSRITATADHHNLSLELGQPSVLATANAEQSSSEGSVTLNASRYADSANDAECRRIQTLFALAETSSADLDALFGRVANASHADEPSVSGFHNGVHGCNLGKYVPNVLITAPRSFPELSTQSPPYVYWSVGVTMLPNSAQPDGPGTNVSDR* # ORIGINAL: g10696.t1 original gene structure, not modified by PASA NODE_935_length_15754_cov_44.124 AUGUSTUS gene 191 499 . + . ID=g10696;Name=g10696.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS mRNA 191 499 . + . ID=g10696.t1;Parent=g10696;Name=g10696.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS exon 191 499 . + . ID=g10696.t1.exon1;Parent=g10696.t1 NODE_935_length_15754_cov_44.124 AUGUSTUS CDS 191 499 . + 0 ID=cds.g10696.t1;Parent=g10696.t1 #PROT g10696.t1 g10696 DQIRLKITEIQSKFRQAAPIVIASGPVSVQQPTIAGGYPLQQIQFQQPYGQPQDAQSQHNHAPPQYDQVQPPYGQGQPPNVQSQYGVPPHPFAPPQPPVAPQ* # ORIGINAL: g2986.t1 original gene structure, not modified by PASA NODE_7150_length_466_cov_43.5422_potentialcontaminant AUGUSTUS gene 272 466 . - . ID=g2986;Name=g2986.t1 NODE_7150_length_466_cov_43.5422_potentialcontaminant AUGUSTUS mRNA 272 466 . - . ID=g2986.t1;Parent=g2986;Name=g2986.t1 NODE_7150_length_466_cov_43.5422_potentialcontaminant AUGUSTUS exon 272 466 . - . ID=g2986.t1.exon1;Parent=g2986.t1 NODE_7150_length_466_cov_43.5422_potentialcontaminant AUGUSTUS CDS 272 466 . - 0 ID=cds.g2986.t1;Parent=g2986.t1 #PROT g2986.t1 g2986 RGSEEVYSTPRPDDEYYAVPALKPRGELQYAEINFGKRGGAKPANGAPGPSTFSNVIYANTADV* # ORIGINAL: g1535.t1 original gene structure, not modified by PASA NODE_1276_length_12450_cov_37.8823 AUGUSTUS gene 9330 11564 . + . ID=g1535;Name=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS mRNA 9330 11564 . + . ID=g1535.t1;Parent=g1535;Name=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 9330 9477 . + . ID=g1535.t1.exon1;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 9330 9477 . + 0 ID=cds.g1535.t1;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 9611 9753 . + . ID=g1535.t1.exon2;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 9611 9753 . + 2 ID=cds.g1535.t1;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 9913 10133 . + . ID=g1535.t1.exon3;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 9913 10133 . + 0 ID=cds.g1535.t1;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 10523 11564 . + . ID=g1535.t1.exon4;Parent=g1535.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 10523 11564 . + 1 ID=cds.g1535.t1;Parent=g1535.t1 #PROT g1535.t1 g1535 MCQGLMDDAGAHRVMVDDELLPTTSVTMQTGVADVSMQANPIDVEVAIIGNGPAGIFLSFLLAGNWPYYSDAEGPHPTSFLHNRLAPTAGKLSVLEQDLEMLSEGLSGRSSNPVSVLFDTLHRPNADMGDEERSRLEWRKDASRGIAHVVLGSGPVGGSWRDMHPSMCSLSCGEWMGLPAYSVSDWYREMGKDPASTTRMQRGDVGLYYDAFVRTMGMSENFMSGVVVESVVPAATGSEAETSRRWIVRGRSVKKDAVTNALCSEPILVYADKVVLATGTFDTAKRMGIEGEDHPFVHHRLRELSCADRPMSPVPPHAPQRTLVVVGGGLAAADAVLLGLAHGMRVVHAFLENPLSPSYVIAGLPRASYPDYHHVLSLMRGAPYEARAASMATYEKVGGHRLVRIDASGRCMFRRGDGDGETVACVDADEVAVMIGIMPCLTYLDPQICARLPRDASLGDVDWKKNPVAVDPFSFETDAAKGLFAIGPLAGDNFVRFVLGGPVGVASHIVRTAALNG* # PASA_UPDATE: g1534.t1, single gene model update, valid-1, status:[pasa:asmbl_1048,status:12],[pasa:asmbl_1049,status:12],[pasa:asmbl_1050,status:12], valid-1 NODE_1276_length_12450_cov_37.8823 . gene 4297 6625 . - . ID=g1534;Name=g1534.t1 NODE_1276_length_12450_cov_37.8823 . mRNA 4297 6625 . - . ID=g1534.t1;Parent=g1534;Name=g1534.t1 NODE_1276_length_12450_cov_37.8823 . five_prime_UTR 6465 6625 . - . ID=g1534.t1.utr5p1;Parent=g1534.t1 NODE_1276_length_12450_cov_37.8823 . exon 4297 6625 . - . ID=g1534.t1.exon1;Parent=g1534.t1 NODE_1276_length_12450_cov_37.8823 . CDS 4497 6464 . - 0 ID=cds.g1534.t1;Parent=g1534.t1 NODE_1276_length_12450_cov_37.8823 . three_prime_UTR 4297 4496 . - . ID=g1534.t1.utr3p1;Parent=g1534.t1 #PROT g1534.t1 g1534 MTVGEDVLVAVRGTHTVGGQCGGTAQTLCLGGVEARLSTSEASLEFQVMASLGGDLALKRKRDDSESDEEVRHTIDAAPVQTSGTPKRPRIEDAELGDQNMARETGGPSAVISSQIQPPSPAIQSVDVVAVTNPAVVGERGDESPSVTAVRAAATHDNAGSDTSVGSSHGGSEGTEKSEMGSDSKPPLSYIALISQAIMSSATKKLTLNEIYQYIADNYAYYRNSNTGWQNSIRHNLSLNDCFVKVTRSRNDPGKGNYWTIDALQQPLFTDGNFKRRKRARRPDSGAQPVSELVAQAHAAATAHVAYAAGQPMMAPGYMHIQMPVHPSYGRGPVPPESMGAVGGWAAQGFGYGGPGAVQYGFDAPYQTAGGQSHGYAMPYGPSSVHPLFSGAPSLAPPGMSESPYAYPSNAGQHQQQSVGIARPPSTYAQQPHAPLWYSAAAGGMPKDVPSGVRTSASVSGSPLPPLVPGGQPQPQPQPQPQPQPQPQPQPQTLADVQLGASQSRQRLQHQQQQQQQLQQQQEAQRLYTLHPSTEPYAYYNPHVMHGGYYGPPAPTGLGPTAVFGPYPSGGIAGHRTDVASGGPHASLDGRHLHHQHQHQQHHAQPQQQQPHHTQQQQQQQQQQQQQQQQQNVEHASGTLPHMHGPMPMSGGEGR* # ORIGINAL: g1532.t1 original gene structure, not modified by PASA NODE_1276_length_12450_cov_37.8823 AUGUSTUS gene 369 1901 . - . ID=g1532;Name=g1532.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS mRNA 369 1901 . - . ID=g1532.t1;Parent=g1532;Name=g1532.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 369 1901 . - . ID=g1532.t1.exon1;Parent=g1532.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 369 1901 . - 0 ID=cds.g1532.t1;Parent=g1532.t1 #PROT g1532.t1 g1532 MLGNTTQEKWAACYVREVAGAGVRSSRRMEILGAFIRLHAMTATRIGDFVVGADMAYGKDGTKTHSLAHATRPLHADIHTSRTKTPAEEAARTSLSTFAADRIAREIVESAAYVVQATDQTMPLQGLQGPVRGTNAPPAAYADPQHVFGLGAHNMHNVHNMHNMHNMQPHHRGGGAAGYHYDADAPPELFPGGGDDSGEASLGSLAAKAAGGCRDACASIFVHAVMQPSATAVLIARGASDVVGNILSSPIPVGSLRTFRVALQHGAVGMQQQQQQQQHSMRRGGIGAAGSASAVGGAQAHSNDANAAGRVVSFVRIGQLPGDYVKRCSCRASTFKGLPCRHIFAVESHLKLHAGLDFRIVSDRWQRASLQQIGRAILSARIKSLVGTPAAAAAAAAAQHQHHHQQQQHAGGSEDALGPSSWQHRTRAMLLARMSHIAGRVTHWGGDAEAAAVVRRLESIERMLDEQVDDEDDGGGGDAAGGGGVREEPAGRGRRGRPAKRPRLAGRQNE* # ORIGINAL: g1533.t1 original gene structure, not modified by PASA NODE_1276_length_12450_cov_37.8823 AUGUSTUS gene 2212 3703 . - . ID=g1533;Name=g1533.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS mRNA 2212 3703 . - . ID=g1533.t1;Parent=g1533;Name=g1533.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 3092 3703 . - . ID=g1533.t1.exon1;Parent=g1533.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 3092 3703 . - 0 ID=cds.g1533.t1;Parent=g1533.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS exon 2212 2814 . - . ID=g1533.t1.exon2;Parent=g1533.t1 NODE_1276_length_12450_cov_37.8823 AUGUSTUS CDS 2212 2814 . - 0 ID=cds.g1533.t1;Parent=g1533.t1 #PROT g1533.t1 g1533 MEANEVDAAQPPGPPESASPEIPAPYVGQLFPSFDAAFSYIVAYCQSQQHACRRGRVRNCSDEEDAAGGPRARYIVCTCEGKPKPTKSEDTRSIRTQCKFGVNVYNRGAAWEVKNVNLVHNHPPLAAPVVSSLKFRGKPPPEELRQLVITLDDAGLSARHIHTVLEKVFREDARTWTEEDVRTILSREGREKASDAAKLFGILKECAEGEVDFFLKWEADSQLLRVRRFFWMSPAHRSNIARFGDVIFVNASLVSNRFQRPLIHVTGVNDEGQACFLGIALVESDTHDDIAWTLSALKQGGYEAAPNVLYTCTRSASATAAADVFPSARHLVCPWQLAQDAAKSVGAALREHFAALLADLTRVRKLDSSAEFDTAFASMCADARYAGPREFLASLHAIKVGACC* # ORIGINAL: g14335.t1 original gene structure, not modified by PASA NODE_3859_length_2614_cov_32.8035 AUGUSTUS gene 295 2504 . - . ID=g14335;Name=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS mRNA 295 2504 . - . ID=g14335.t1;Parent=g14335;Name=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS exon 2364 2504 . - . ID=g14335.t1.exon1;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS CDS 2364 2504 . - 0 ID=cds.g14335.t1;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS exon 1684 1839 . - . ID=g14335.t1.exon2;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS CDS 1684 1839 . - 0 ID=cds.g14335.t1;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS exon 1241 1434 . - . ID=g14335.t1.exon3;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS CDS 1241 1434 . - 0 ID=cds.g14335.t1;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS exon 877 1000 . - . ID=g14335.t1.exon4;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS CDS 877 1000 . - 1 ID=cds.g14335.t1;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS exon 295 570 . - . ID=g14335.t1.exon5;Parent=g14335.t1 NODE_3859_length_2614_cov_32.8035 AUGUSTUS CDS 295 570 . - 0 ID=cds.g14335.t1;Parent=g14335.t1 #PROT g14335.t1 g14335 MIDCLLSCFRLNHRNVIGSLFSQCMEDASPPIFKLVLVKTLRQIAKEVYLRKARQHDALKRNAGKAKTDKKMLEEALIDGEILQKIIELFHIDPKLALVNPNADAATIRNDTRELLAGLTSCIQDVNNPEIAESAVGALLELHKPAHMAQWNPLDVMPSFWEISSHVTISMALQLISNKGGNTSQLMQWLREMILHRNGFLRLNKEVAAVGSDNEVRVQTNNKLEVAFLIHLWNPDVEVISMSSRMFGYLVEENEILADAEGAVGTHSTGSIVANRDVYRELASAGVLLTGTLLFD* # ORIGINAL: g2259.t1 original gene structure, not modified by PASA NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS gene 409 2233 . + . ID=g2259;Name=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS mRNA 409 2233 . + . ID=g2259.t1;Parent=g2259;Name=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 409 552 . + . ID=g2259.t1.exon1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 409 552 . + 2 ID=cds.g2259.t1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 790 864 . + . ID=g2259.t1.exon2;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 790 864 . + 2 ID=cds.g2259.t1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 1179 1322 . + . ID=g2259.t1.exon3;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 1179 1322 . + 2 ID=cds.g2259.t1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 1445 1542 . + . ID=g2259.t1.exon4;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 1445 1542 . + 2 ID=cds.g2259.t1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 1927 2052 . + . ID=g2259.t1.exon5;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 1927 2052 . + 0 ID=cds.g2259.t1;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS exon 2222 2233 . + . ID=g2259.t1.exon6;Parent=g2259.t1 NODE_3873_length_2586_cov_31.0458_potentialcontaminant AUGUSTUS CDS 2222 2233 . + 0 ID=cds.g2259.t1;Parent=g2259.t1 #PROT g2259.t1 g2259 GWQMAVSKYSKHKAIAVEFAKFMVSESVQRARAVNDARMPTRTALYDETPVCSSLNICGVTLSHVARPSTVSAPNYLAMSRAIFKNVRSALAGEVTVSAMLVALKTDAEKVLGTYTAPIPETGSGSNNKDTIIGAVVACGGGSIIFIAVVAYMRRSKKRALATQQKRARNVIDYNDLSFEEVVGRGGFGEVSRGKHKD* # ORIGINAL: g3143.t1 original gene structure, not modified by PASA NODE_2960_length_4638_cov_34.1378_potentialcontaminant AUGUSTUS gene 3524 4195 . + . ID=g3143;Name=g3143.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant AUGUSTUS mRNA 3524 4195 . + . ID=g3143.t1;Parent=g3143;Name=g3143.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant AUGUSTUS exon 3524 4195 . + . ID=g3143.t1.exon1;Parent=g3143.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant AUGUSTUS CDS 3524 4195 . + 0 ID=cds.g3143.t1;Parent=g3143.t1 #PROT g3143.t1 g3143 MAATVKMLRGRANNGRPNCVWIAAIVALCASVICAAAAEDTSSVLVPSESSSERSSSLVTSVVSSAPALTDSPSSATTSNSAAETTATAPLQSSVSVPESSAATPIPSTVQGSSALSSDASVNPAASTTAEAATSTFASVAPSVVPVASSASTTAAAVSSPAAFSSPAAVSSPAAVSSASASYAPTAPAPTGSAPSPSPSATAAPGWLFVHVAPRDTNAHTLR* # PASA_UPDATE: g3142.t1, single gene model update, valid-1, status:[pasa:asmbl_5314,status:12], valid-1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . gene 478 2830 . + . ID=g3142;Name=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . mRNA 478 2830 . + . ID=g3142.t1;Parent=g3142;Name=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . five_prime_UTR 478 481 . + . ID=g3142.t1.utr5p1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 478 619 . + . ID=g3142.t1.exon1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 482 619 . + 0 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 747 839 . + . ID=g3142.t1.exon2;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 747 839 . + 0 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 1022 1092 . + . ID=g3142.t1.exon3;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 1022 1092 . + 0 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 1291 1430 . + . ID=g3142.t1.exon4;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 1291 1430 . + 1 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 1702 1798 . + . ID=g3142.t1.exon5;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 1702 1798 . + 2 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 2143 2264 . + . ID=g3142.t1.exon6;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 2143 2264 . + 1 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . exon 2543 2830 . + . ID=g3142.t1.exon7;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . CDS 2543 2583 . + 2 ID=cds.g3142.t1;Parent=g3142.t1 NODE_2960_length_4638_cov_34.1378_potentialcontaminant . three_prime_UTR 2584 2830 . + . ID=g3142.t1.utr3p1;Parent=g3142.t1 #PROT g3142.t1 g3142 MADRHTVYKQCLKELADKQGISVTFMAKPHHDQSGSSCHIHLSLWKDGKNAFAGTNDVGDGIMASDIFLWFLGGWIKHTPEVMLFYAPTINSYKRYIDESWAPTRLAWCKDNRTAGFRIVGAGPSLRIECRIPGADCNIYLAFAASIASGLDGILNKIDPPPMFKGDIYSAQNLPRVPYSLTESADIMASSEWARSAFGSDVVDHYVHHSREEVKAFNRAVTDWERTRYFERI* # ORIGINAL: g9889.t1 original gene structure, not modified by PASA NODE_3623_length_3099_cov_40.7659 AUGUSTUS gene 90 2734 . - . ID=g9889;Name=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS mRNA 90 2734 . - . ID=g9889.t1;Parent=g9889;Name=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 2611 2734 . - . ID=g9889.t1.exon1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 2611 2734 . - 0 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 2225 2338 . - . ID=g9889.t1.exon2;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 2225 2338 . - 2 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 1905 2014 . - . ID=g9889.t1.exon3;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 1905 2014 . - 2 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 1579 1772 . - . ID=g9889.t1.exon4;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 1579 1772 . - 0 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 1214 1306 . - . ID=g9889.t1.exon5;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 1214 1306 . - 1 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 834 894 . - . ID=g9889.t1.exon6;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 834 894 . - 1 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 491 652 . - . ID=g9889.t1.exon7;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 491 652 . - 0 ID=cds.g9889.t1;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS exon 90 210 . - . ID=g9889.t1.exon8;Parent=g9889.t1 NODE_3623_length_3099_cov_40.7659 AUGUSTUS CDS 90 210 . - 0 ID=cds.g9889.t1;Parent=g9889.t1 #PROT g9889.t1 g9889 MLWSTASLVASSSVDTFLEAAKAHMAAQQYTEALDAYSRAIALDPTNYLTYYKRATVQFAMGRSKTALEDLDEVIRLRPEFSQALLQRANYYFRSGRFDLARADFQKAGTPEAQEKIHQVDTVENHIAVGRSSLAHQDFSGANHVLGLAVELCPSYDKLRILRAQASIGLGDLMSAIGDLSRATKLNPDNADAHYTMSTLYFTRGEPTEALKAVRDCLKIDADHPQCNPYYKKLKRFEKLLLDGESKLAAGDGLGAIDKLSAALKIDSSAVFAARIYTAMCKSYLSLRTLKEAIDACTNAIRSDPNQAEPHIEKGEAHLLLEEWDQ # PASA_UPDATE: g10064.t1, single gene model update, valid-1, status:[pasa:asmbl_4211,status:12], valid-1 NODE_2395_length_6428_cov_37.7768 . gene 5034 6347 . - . ID=g10064;Name=g10064.t1 NODE_2395_length_6428_cov_37.7768 . mRNA 5034 6347 . - . ID=g10064.t1;Parent=g10064;Name=g10064.t1 NODE_2395_length_6428_cov_37.7768 . five_prime_UTR 6296 6347 . - . ID=g10064.t1.utr5p1;Parent=g10064.t1 NODE_2395_length_6428_cov_37.7768 . exon 5904 6347 . - . ID=g10064.t1.exon1;Parent=g10064.t1 NODE_2395_length_6428_cov_37.7768 . CDS 5904 6295 . - 0 ID=cds.g10064.t1;Parent=g10064.t1 NODE_2395_length_6428_cov_37.7768 . exon 5034 5595 . - . ID=g10064.t1.exon2;Parent=g10064.t1 NODE_2395_length_6428_cov_37.7768 . CDS 5190 5595 . - 1 ID=cds.g10064.t1;Parent=g10064.t1 NODE_2395_length_6428_cov_37.7768 . three_prime_UTR 5034 5189 . - . ID=g10064.t1.utr3p1;Parent=g10064.t1 #PROT g10064.t1 g10064 MTAAIEDQNTYMGIILGTGTNACYWEDVRDITKWKNRPATGHVIINSEWGNFDAQKEVLPTTSYDHMLDANSLNAGKQIYEKMISGMYLGEVVRLVVLDLAVSGKLFNGRTSDKLRMPWGFKTSFMSDVESDSKDFDLELTGTIISRELGIFNPTLADRYLVRKICTLVSTRAARLAGAAVVAVLRKMNRLQSCTIGVDGSVFQFYPHFEERMRETMDELIPGGSKGIVFKRSEDGSGKGAALVAATAVRGVDGSEHKEKHRKHH* # ORIGINAL: g10063.t1 original gene structure, not modified by PASA NODE_2395_length_6428_cov_37.7768 AUGUSTUS gene 1016 4922 . + . ID=g10063;Name=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS mRNA 1016 4922 . + . ID=g10063.t1;Parent=g10063;Name=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS exon 1016 4174 . + . ID=g10063.t1.exon1;Parent=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS CDS 1016 4174 . + 0 ID=cds.g10063.t1;Parent=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS exon 4495 4615 . + . ID=g10063.t1.exon2;Parent=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS CDS 4495 4615 . + 0 ID=cds.g10063.t1;Parent=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS exon 4732 4922 . + . ID=g10063.t1.exon3;Parent=g10063.t1 NODE_2395_length_6428_cov_37.7768 AUGUSTUS CDS 4732 4922 . + 2 ID=cds.g10063.t1;Parent=g10063.t1 #PROT g10063.t1 g10063 MMTLSGKRRRSDDGDGHEDTDVTSTIARSPLSARKRTRGESAPDDSCIGGDRMPPLCIQSAVGNVACDFVRHRNNTNASAADPSAAKALAQRVLGAISEGSHSGRHGDRQQRFANATSIVADNKDSPAFRLCVAYGIANIINACGRYGRSCALRILEAIACAAAAQDAPAHTPLPHANTGRCTPALVDSGDGSVDEQLEAKVTKDMALSIAAQCLKDPDYFIRTLSLKVVLAASPADMPHAASPSLCDVDPRVRVSAVQCLVRAHVDHSVHLPISLYSSSVSLLDDEDEDVRLEAVSLVSALGRLHDDAPVASRALSSATSAKTIDDSFVRVCDAVNDSSPHVRARAVVQLGVFWGVTRGILLQTFDKKLMSHLRTTKSAKEEARSRRNYGYTFGEDSGVSNNNNNTNNNNSKSIRGSHYSGANTDVPMDRGRAAGAVPVTVLDSGVCGAFVQAFEDEFMEVRLAAVASACALCVSNRAIAEVALDFLVDMFNDEIDEVRLCALQCMARVVRSFTSLPSQSLLLTPSLAERERLLGVDEDNKDSICIGNERDARARGDCTDSFPVVGQKLRGSASIEISPRRPLVMEYEHIEITLSLLEDASAPMRAATRDLIRCMHLKDEQCVRAVVTALLAGMKRFPSDTESVWVCMRDVGRNHSGFAADLCPELLHTDYRFAAVECQVDDPAYIATLAFLLAAAHSHAPLLSMLPPHTHSHWLYLRKSRPSLFPDALQFCVPAVIALPATRPLLDAPSLAQFASQAQLGLERAVAALERARIGLQRGGSMPSGVLVACIRTLQALANASTATAPSLHGGDFVSHATPTTVLCCRARAALVYAQCLSASDSLRRVFADLPDSPDASAVAVPAWRLLRLAYRASVQFSPLSGQEKSVLAECRAVACVALQLARLSQSPSANDSAHATVRVGVSSATSTPSEIANALVMRLSGVASAVLAREPHHPSRASPAAHNLAVALSSLAQSSTPDTCRGTPRAVVDALCAWLPPWASWSGVLTCTRASIVSVGWESEKPMTFDADLSPGVAVECVVDGVTGTDLLALRLSHPGCPDHIHVPPPDHIESLSEGRFKITTVVRLAHRPWTEPSRVRLCVVLVGRPDPCELPECIGAATTSISESKLLSIFPVSRSTITLGPVRSMPVASLGHP* # ORIGINAL: g13100.t1 original gene structure, not modified by PASA NODE_2259_length_7025_cov_45.482 AUGUSTUS gene 1351 2456 . + . ID=g13100;Name=g13100.t1 NODE_2259_length_7025_cov_45.482 AUGUSTUS mRNA 1351 2456 . + . ID=g13100.t1;Parent=g13100;Name=g13100.t1 NODE_2259_length_7025_cov_45.482 AUGUSTUS exon 1351 1421 . + . ID=g13100.t1.exon1;Parent=g13100.t1 NODE_2259_length_7025_cov_45.482 AUGUSTUS CDS 1351 1421 . + 0 ID=cds.g13100.t1;Parent=g13100.t1 NODE_2259_length_7025_cov_45.482 AUGUSTUS exon 1571 2456 . + . ID=g13100.t1.exon2;Parent=g13100.t1 NODE_2259_length_7025_cov_45.482 AUGUSTUS CDS 1571 2456 . + 1 ID=cds.g13100.t1;Parent=g13100.t1 #PROT g13100.t1 g13100 MHHRSRHAPSSFTTEAVPTADGLLLEAHIFRTKAHRPRAAVIINGATAVAQRYYAPFASHLANEGFDVITYDYRGVGASRPKQANNGGDLGNAAFQASLRDWALLDYPAVMGHVDAAAHWAGIPLVVVGHSLGGQMFAMADYPSRKRVCAAVLVASQIGDYRLWSGLLRIVRAVQWHALVPAVVGIAGYLPGWIGLGEHLPGGVGRDIAHWCRARDHVFGVHPQAASVAASFARPLMSFEIPDDPFAPSRATDALLSRFRTASIQRKVLHPGDYGLSRIDHFDFFRKKNADKFWYEIVSWIDARLLEKTSSLDTHQLK* # PASA_UPDATE: g13101.t1, single gene model update, valid-1, status:[pasa:asmbl_3886,status:12], valid-1 NODE_2259_length_7025_cov_45.482 . gene 2967 4630 . - . ID=g13101;Name=g13101.t1 NODE_2259_length_7025_cov_45.482 . mRNA 2967 4630 . - . ID=g13101.t1;Parent=g13101;Name=g13101.t1 NODE_2259_length_7025_cov_45.482 . five_prime_UTR 4284 4630 . - . ID=g13101.t1.utr5p1;Parent=g13101.t1 NODE_2259_length_7025_cov_45.482 . exon 3561 4630 . - . ID=g13101.t1.exon1;Parent=g13101.t1 NODE_2259_length_7025_cov_45.482 . CDS 3561 4283 . - 0 ID=cds.g13101.t1;Parent=g13101.t1 NODE_2259_length_7025_cov_45.482 . exon 2967 3362 . - . ID=g13101.t1.exon2;Parent=g13101.t1 NODE_2259_length_7025_cov_45.482 . CDS 2967 3362 . - 0 ID=cds.g13101.t1;Parent=g13101.t1 #PROT g13101.t1 g13101 MIPTTDAMTAAGCILRRASLVLKGEGSEMQPCKSTSSDTAAAPVRRNGYDMPMSGSARRSSTWDAPIAQIRRSSVDIRQFASRSLRNLSVEIASIIVAPTRLFRTFCVPDVCLRWWDIDYQARGYGLLHVPFAHYVHMVAFTVMIAAMFAGNIAASNGVAPLGLATLTLLSWIFYQRNDAPTFRIAVIIAWIALYALGQLAVAVVTPAVILNWQITTIAASAIALVGSHLTDEAPPFINFQQADKSMPWPLWMRENIFERKLDPVFFLMFPFSLLQEFLAPLRLVPAIIFITFFDADAGAGEAVARALSSLAKEATFKHLVTQSPMSIAAKYYSDTYGVPAAWIEDHMTATAVVSHLIPFVAQVFFITAAHA* # PASA_UPDATE: g13102.t1, single gene model update, valid-1, status:[pasa:asmbl_3889,status:12], valid-1 NODE_2259_length_7025_cov_45.482 . gene 5623 7025 . - . ID=g13102;Name=g13102.t1 NODE_2259_length_7025_cov_45.482 . mRNA 5623 7025 . - . ID=g13102.t1;Parent=g13102;Name=g13102.t1 NODE_2259_length_7025_cov_45.482 . five_prime_UTR 7024 7025 . - . ID=g13102.t1.utr5p1;Parent=g13102.t1 NODE_2259_length_7025_cov_45.482 . exon 6097 7025 . - . ID=g13102.t1.exon1;Parent=g13102.t1 NODE_2259_length_7025_cov_45.482 . CDS 6097 7023 . - 0 ID=cds.g13102.t1;Parent=g13102.t1;5_prime_partial=true NODE_2259_length_7025_cov_45.482 . exon 5623 5980 . - . ID=g13102.t1.exon2;Parent=g13102.t1 NODE_2259_length_7025_cov_45.482 . CDS 5657 5980 . - 0 ID=cds.g13102.t1;Parent=g13102.t1 NODE_2259_length_7025_cov_45.482 . three_prime_UTR 5623 5656 . - . ID=g13102.t1.utr3p1;Parent=g13102.t1 #PROT g13102.t1 g13102 VGYLKSKARATGTAASKALVTDGFNRAVSVISNVSTAKSFVQEDAEAERFASSMREAYDHAAIKLTAQAASRGFTALFQLGVFGFVLWYGSTLVVSGEMISSDVLVVFFSVVLGLIGLGQALELSADFAKGQRAMHRVVGAIDSATTEYTCTPTATSTTATPRADVSPAPAHAITFEDVEFAYPSRPAAQVLKGLSLTFHAGKVSALVGPSGSGKSTIAQLLMRFYDADAGHVRVDGSDIHKLHLPTLRRSIGVVSQEPSLFAGSILDNIRYGRPDASMEQVVEAARAANAHDFISAFKDGYATVVGERGTQLSGGQKQRIAIARAVLIDPAILLLDEATSALDSESEHVVQEALERLMVGRTCIVIAHRLATIQKADTIFVLRSGRLVEQGTHDQLVAVENGTYADLVAKQALLS* # ORIGINAL: g3082.t1 original gene structure, not modified by PASA NODE_6435_length_571_cov_24.1694_potentialcontaminant AUGUSTUS gene 115 256 . + . ID=g3082;Name=g3082.t1 NODE_6435_length_571_cov_24.1694_potentialcontaminant AUGUSTUS mRNA 115 256 . + . ID=g3082.t1;Parent=g3082;Name=g3082.t1 NODE_6435_length_571_cov_24.1694_potentialcontaminant AUGUSTUS exon 115 256 . + . ID=g3082.t1.exon1;Parent=g3082.t1 NODE_6435_length_571_cov_24.1694_potentialcontaminant AUGUSTUS CDS 115 256 . + 1 ID=cds.g3082.t1;Parent=g3082.t1 #PROT g3082.t1 g3082 TAPPDRIRRLQVRGYLVDFPLDFLKQEYLGPTVGTREYMVPIKTFT* # ORIGINAL: g309.t1 original gene structure, not modified by PASA NODE_2534_length_5984_cov_40.9237 AUGUSTUS gene 4555 5298 . - . ID=g309;Name=g309.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS mRNA 4555 5298 . - . ID=g309.t1;Parent=g309;Name=g309.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS exon 4555 5298 . - . ID=g309.t1.exon1;Parent=g309.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS CDS 4555 5298 . - 0 ID=cds.g309.t1;Parent=g309.t1 #PROT g309.t1 g309 MPANDSRIKRLNGQKELISFVALTLVLLLVTNSDQITDPLQSERAADTALLQIWCAVWNDRCFNGTSATILPCWSTRELIKIDFFGTLRNNTYNINQNRWCDYMIGEGDFITKQIKRTQCHFPSESFLGIVGGVEVVAGISVHLPSFLSYEASLTRFRNMTVIYVLHTLFQISIYAALVNFYSTSGDGCFQQGPLTYFNGALITLIINLILLIVTFIRFRNRGPTAEDIEFGTQQATGTDFEVRYTK* # ORIGINAL: g308.t1 original gene structure, not modified by PASA NODE_2534_length_5984_cov_40.9237 AUGUSTUS gene 1294 2085 . - . ID=g308;Name=g308.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS mRNA 1294 2085 . - . ID=g308.t1;Parent=g308;Name=g308.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS exon 1294 2085 . - . ID=g308.t1.exon1;Parent=g308.t1 NODE_2534_length_5984_cov_40.9237 AUGUSTUS CDS 1294 2085 . - 0 ID=cds.g308.t1;Parent=g308.t1 #PROT g308.t1 g308 MSLLDDIFAELQSRGSELSFSTAELDDVRTRTAAAATVEPTPSLDSLKDDLFASLSLSISAAASPAITSHSESPLQTASLRPNGADASSDSPASRDISADDEDDDMSVASPMSPSPSVVITPLSSLSIVPPKLPRPPFSPRAASRATLLIAIEEAADVEGENTARDSLSRPPSGQVTPEGNRSPVTQRLSPAQRMMMRESRSAGSIRESFRSSGRRLSNISRLSLPSEDSGEDVSGDGARENGDGEDDGIAVASIPEEGRIPG* # PASA_UPDATE: g5513.t1, single gene model update, valid-1, status:[pasa:asmbl_7850,status:3], valid-1 NODE_508_length_22161_cov_41.2482 . gene 17109 21608 . - . ID=g5513;Name=g5513.t1 NODE_508_length_22161_cov_41.2482 . mRNA 17109 21608 . - . ID=g5513.t1;Parent=g5513;Name=g5513.t1 NODE_508_length_22161_cov_41.2482 . five_prime_UTR 21412 21608 . - . ID=g5513.t1.utr5p1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 21372 21608 . - . ID=g5513.t1.exon1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 21372 21411 . - 0 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 21131 21228 . - . ID=g5513.t1.exon2;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 21131 21228 . - 2 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 20697 20797 . - . ID=g5513.t1.exon3;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 20697 20797 . - 0 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 20174 20366 . - . ID=g5513.t1.exon4;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 20174 20366 . - 1 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 19607 19806 . - . ID=g5513.t1.exon5;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 19607 19806 . - 0 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 19322 19453 . - . ID=g5513.t1.exon6;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 19322 19453 . - 1 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 18762 18906 . - . ID=g5513.t1.exon7;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 18762 18906 . - 1 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 18364 18456 . - . ID=g5513.t1.exon8;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 18364 18456 . - 0 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 18014 18158 . - . ID=g5513.t1.exon9;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 18014 18158 . - 0 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . exon 17109 17660 . - . ID=g5513.t1.exon10;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . CDS 17560 17660 . - 2 ID=cds.g5513.t1;Parent=g5513.t1 NODE_508_length_22161_cov_41.2482 . three_prime_UTR 17109 17559 . - . ID=g5513.t1.utr3p1;Parent=g5513.t1 #PROT g5513.t1 g5513 MLKAVILIGGPARATSFRPLSLHSEKPLFPVAGVPMLQHHIEALAKVPSLKEIILIGFYEEAQISKFILMAQRVTTVPIRYLREYQALGTAGGLYHFRDQILAGNPELFFVMHGDICSTFPLNEILAFHKTVGGGNHCTVMGTTVSDEEAVNYGCLVANPQTHEVMHYAEKPETFVSNCINCGVYLFAPSVFDYIRDVYNANALKASYDESNYQSQPRPKDIVRLEQDILVPLAGSGRVFLFNTIDSWRQIKKPGSAVVANKFYLDVYRKRCPERLATRTKEGPHIVGNVLIDPTASVDATAKIGPNVTIGPGVRIGPGVRVADSIILDHVTIQRDACVLHSIIGWNSVIGRWSRVEGTYHTIPHAGNSFVDGRKIPGVTIIGEGVTVAPEVIVMNTIVLPHKDISSGCKNEILL* # PASA_UPDATE: g5508.t1, single gene model update, valid-1, status:[pasa:asmbl_7847,status:12], valid-1 NODE_508_length_22161_cov_41.2482 . gene 1641 4780 . - . ID=g5508;Name=g5508.t1 NODE_508_length_22161_cov_41.2482 . mRNA 1641 4780 . - . ID=g5508.t1;Parent=g5508;Name=g5508.t1 NODE_508_length_22161_cov_41.2482 . five_prime_UTR 4665 4780 . - . ID=g5508.t1.utr5p1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 3766 4780 . - . ID=g5508.t1.exon1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 3766 4664 . - 0 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 3035 3629 . - . ID=g5508.t1.exon2;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 3035 3629 . - 1 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 2726 2840 . - . ID=g5508.t1.exon3;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 2726 2840 . - 0 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 2443 2566 . - . ID=g5508.t1.exon4;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 2443 2566 . - 2 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 2165 2270 . - . ID=g5508.t1.exon5;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 2165 2270 . - 1 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . exon 1641 1938 . - . ID=g5508.t1.exon6;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . CDS 1732 1938 . - 0 ID=cds.g5508.t1;Parent=g5508.t1 NODE_508_length_22161_cov_41.2482 . three_prime_UTR 1641 1731 . - . ID=g5508.t1.utr3p1;Parent=g5508.t1 #PROT g5508.t1 g5508 MGLKRNHGAPSGNDADSFALLVEDEDVDDSETPVLPDGARADSGRGASGAHGRSSRHSHGTESHSHAVNSELTGHGHGHGHGHGHGIAGLAQLKRVAVLRHFYELAGGDRLYLAVGVFGLFVSAGVNLFLPWSLGNVIKGADGGSFSSVVRVTILYLFVYLGGAVMTAVRTYAFMISGERLVRRVRQELYKSIVLRPIIFFDKHRTGDLLNRISADCDVIRQAITFTLVQVVRFSIQVIGGGAFLFYISWQLTLVLLCVIPVLGVAALVYSRIARRLSLAVQGSLARNAGAADEVLGGIRHVRAYAREAYELSRFEGLLGETFSLAAKQVRAQAIFLGGAEFGAYAAVLLVILFGTHQIMNGQLEAATLTEYILYAVYVSHALGAISHQGAEVAKAVGASERVIELLKTAPRPQEGGKRPATVRGEVEFKGVTLAYNEIDEDGAYTGEASAVGGAFEPSLKALSFKVAAGESVGIVGSSGSGKSSTLGLVLRFYEPKEGSILFDGTDITELDPLWLREHIAYVSQEPILFCTTVLENLKYGRPDATTEEVYAACKSAHIHDFILSLRDGYETVVGERGSLLSGGQKQRLSIARALLKDAPIVLLDEPTSALDAESEKGVQDALRTLLSNRTCLFVTHRLDAMRFMSRVLVMSRGAVVESGSHADLIAQNGIYAKLYSLQMQ* # PASA_UPDATE: g5509.t1, single gene model update, valid-1, status:[pasa:asmbl_7848,status:12], valid-1 NODE_508_length_22161_cov_41.2482 . gene 5174 7372 . - . ID=g5509;Name=g5509.t1 NODE_508_length_22161_cov_41.2482 . mRNA 5174 7372 . - . ID=g5509.t1;Parent=g5509;Name=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 7331 7372 . - . ID=g5509.t1.exon1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 7331 7372 . - 0 ID=cds.g5509.t1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 7006 7237 . - . ID=g5509.t1.exon2;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 7006 7237 . - 0 ID=cds.g5509.t1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 6597 6751 . - . ID=g5509.t1.exon3;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 6597 6751 . - 2 ID=cds.g5509.t1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 6143 6240 . - . ID=g5509.t1.exon4;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 6143 6240 . - 0 ID=cds.g5509.t1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 5692 5839 . - . ID=g5509.t1.exon5;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 5692 5839 . - 1 ID=cds.g5509.t1;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . exon 5174 5431 . - . ID=g5509.t1.exon6;Parent=g5509.t1 NODE_508_length_22161_cov_41.2482 . CDS 5174 5431 . - 0 ID=cds.g5509.t1;Parent=g5509.t1 #PROT g5509.t1 g5509 MPSTLTLPIVLIILVLSPCLIDAYTLESCIDLCGRLRGHGTGSFSAAACLSGCKGAVPLLRSLAGSADVRTICTSVCGTNDAACMDGCELRAACYPADKSKDEYESCNPHGAHYRAHDKVTGDFVDVEPCVWYPTSDNEGHARCWCRPGFPGDTCNEYMCSDPRSFFGPYNGGPDIVECFPPPDAQGRYNASSECRVTCTNGRTAIGPVKEITIVCDSSKAFSKKGTPAGSILSFFCTPDYTLEIAGGAVSAPPLKTGGSESLSVGAIVGTSMGAVAGCAIVAVAALYSMRVRRRPAGGWAGESRALLLI* # ORIGINAL: g5512.t1 original gene structure, not modified by PASA NODE_508_length_22161_cov_41.2482 AUGUSTUS gene 14358 16701 . + . ID=g5512;Name=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS mRNA 14358 16701 . + . ID=g5512.t1;Parent=g5512;Name=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 14358 14477 . + . ID=g5512.t1.exon1;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 14358 14477 . + 0 ID=cds.g5512.t1;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 14733 14768 . + . ID=g5512.t1.exon2;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 14733 14768 . + 0 ID=cds.g5512.t1;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 15162 15781 . + . ID=g5512.t1.exon3;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 15162 15781 . + 0 ID=cds.g5512.t1;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 16142 16275 . + . ID=g5512.t1.exon4;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 16142 16275 . + 1 ID=cds.g5512.t1;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 16499 16701 . + . ID=g5512.t1.exon5;Parent=g5512.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 16499 16701 . + 2 ID=cds.g5512.t1;Parent=g5512.t1 #PROT g5512.t1 g5512 MADCVDPATLATLRGRPDVKSKPRRKTTFDARLRRWLLTQVNRGTDTVVAFQRFFGVTPECPEGHPLLTAYFRFGAALGQEVTFILFLPFIFWNGPLEGCVWALTMWVASYYVGQVVKDLMRLPRPPHPPVVRMEKHYDEEYGLPSTHVMGCTVPWSLAAYAILTDACPWYYAAAFAAAWTVTVTSSRLYLGVHSPADIIVGAGLAVAIFGLYFPYYDTFGKWILYERGEVLVAVPMVALCLLCVYPSPPKWTPAYGDTAIIVGVATGVLMGVSVNDEKAHLALSTAQLMQESVLSMVARHLLGYGTLFATRAAGKAITVALFTWLSPSNSVPYNRRYAIEIPYKFVTYSLVGFNAVYTAPILMKNFGLA* # ORIGINAL: g5507.t1 original gene structure, not modified by PASA NODE_508_length_22161_cov_41.2482 AUGUSTUS gene 278 998 . - . ID=g5507;Name=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS mRNA 278 998 . - . ID=g5507.t1;Parent=g5507;Name=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 983 998 . - . ID=g5507.t1.exon1;Parent=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 983 998 . - 0 ID=cds.g5507.t1;Parent=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 690 841 . - . ID=g5507.t1.exon2;Parent=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 690 841 . - 2 ID=cds.g5507.t1;Parent=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 278 442 . - . ID=g5507.t1.exon3;Parent=g5507.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 278 442 . - 0 ID=cds.g5507.t1;Parent=g5507.t1 #PROT g5507.t1 g5507 MPQTKDSAWVGSPAEFVSSNGGCFVIRKVLIANNGNAAVKCIRSLRKWCYETFGNERAIALAVLATPEDIRANAEFIRMADQYVPVVGGSNNNNYANVELIVDTAERIKAQ # ORIGINAL: g5510.t1 original gene structure, not modified by PASA NODE_508_length_22161_cov_41.2482 AUGUSTUS gene 8279 10895 . + . ID=g5510;Name=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS mRNA 8279 10895 . + . ID=g5510.t1;Parent=g5510;Name=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 8279 8401 . + . ID=g5510.t1.exon1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 8279 8401 . + 0 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 8540 8690 . + . ID=g5510.t1.exon2;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 8540 8690 . + 0 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 8907 9057 . + . ID=g5510.t1.exon3;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 8907 9057 . + 2 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 9158 9217 . + . ID=g5510.t1.exon4;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 9158 9217 . + 1 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 9748 9828 . + . ID=g5510.t1.exon5;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 9748 9828 . + 1 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 10163 10255 . + . ID=g5510.t1.exon6;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 10163 10255 . + 1 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 10468 10560 . + . ID=g5510.t1.exon7;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 10468 10560 . + 1 ID=cds.g5510.t1;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS exon 10844 10895 . + . ID=g5510.t1.exon8;Parent=g5510.t1 NODE_508_length_22161_cov_41.2482 AUGUSTUS CDS 10844 10895 . + 1 ID=cds.g5510.t1;Parent=g5510.t1 #PROT g5510.t1 g5510 MDLSVLQHSLATLPHGNSADVLAAAVHAALLSDGFKAITDERDLASQWKVADGIFVARYNHSRATGEEFIVKLVATDGILAVYVSASSVMAAADGVLECSLDLAEHVVMSDPLTTSSIRNPSKLFATLTEKIFARLVKSDARVRDNSQSGDAASAGRAHGGSLQGYDRSPFEIGRGDLLPGGGGMGAEGGMVVGPHHPLFGAIPRDPRGDEQFGPNRLPPGSVPPGARFDPIFPHMGPNVPGRGFAPPRGGPDPDDMRMPGFDYDLL* # PASA_UPDATE: g5511.t1, single gene model update, valid-1, status:[pasa:asmbl_7851,status:12], valid-1 NODE_508_length_22161_cov_41.2482 . gene 11458 12928 . - . ID=g5511;Name=g5511.t1 NODE_508_length_22161_cov_41.2482 . mRNA 11458 12928 . - . ID=g5511.t1;Parent=g5511;Name=g5511.t1 NODE_508_length_22161_cov_41.2482 . five_prime_UTR 12782 12928 . - . ID=g5511.t1.utr5p1;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . exon 12587 12928 . - . ID=g5511.t1.exon1;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . CDS 12587 12781 . - 0 ID=cds.g5511.t1;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . exon 12145 12275 . - . ID=g5511.t1.exon2;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . CDS 12145 12275 . - 0 ID=cds.g5511.t1;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . exon 11458 11626 . - . ID=g5511.t1.exon3;Parent=g5511.t1 NODE_508_length_22161_cov_41.2482 . CDS 11458 11626 . - 1 ID=cds.g5511.t1;Parent=g5511.t1 #PROT g5511.t1 g5511 MSALPNPPALIEHKNMKFLIMDAPSDSNLGVYITELKKHKVKDVVRVCDPTYNTERLAREGITVWDWPFGDGEAPPANVINEWLALVQDRFKKDSQECIAIHCVAGLGRAPVLVAVALVEAGLEAEDVVDYIRQRRRGAINSKQLKFLQKYKPHSSNGKGCVIS* # PASA_UPDATE: g10438.t1, single gene model update, valid-1, status:[pasa:asmbl_7239,status:12], valid-1 NODE_4346_length_1773_cov_37.7026 . gene 24 1688 . + . ID=g10438;Name=g10438.t1 NODE_4346_length_1773_cov_37.7026 . mRNA 24 1688 . + . ID=g10438.t1;Parent=g10438;Name=g10438.t1 NODE_4346_length_1773_cov_37.7026 . five_prime_UTR 24 378 . + . ID=g10438.t1.utr5p1;Parent=g10438.t1 NODE_4346_length_1773_cov_37.7026 . exon 24 516 . + . ID=g10438.t1.exon1;Parent=g10438.t1 NODE_4346_length_1773_cov_37.7026 . CDS 379 516 . + 0 ID=cds.g10438.t1;Parent=g10438.t1 NODE_4346_length_1773_cov_37.7026 . exon 870 1688 . + . ID=g10438.t1.exon2;Parent=g10438.t1 NODE_4346_length_1773_cov_37.7026 . CDS 870 1688 . + 0 ID=cds.g10438.t1;Parent=g10438.t1 #PROT g10438.t1 g10438 MGASESKNAELESLVRGLSAEDRATLDQATLRMFDAQPSIPLDTFKAHCSVFSVDVAERLFRGLCAREGNAAATGHAHSHAHSHAHSHSQAPSRGSSADVLHRDIFSLWIGALIGGAPSNKPALFFALFGADIVDRPSFEACVAEVAARALELDNRVETEALRDAGRGRPEGRSAAAFADAAFYDAQASSPVDRVHSSTIDADRFSRFLSNSPIALALFQATFELGLLGHVTDSARLRLHSYAPARVASSLLDLESAWHVMNQLPADCRSEWRPLYSSKADGKSFNRFTTHAMDKVRRLAVCLSLSLSLLWSPWAQRL* # ORIGINAL: g2140.t1 original gene structure, not modified by PASA NODE_3697_length_2932_cov_38.5681_potentialcontaminant AUGUSTUS gene 149 1138 . - . ID=g2140;Name=g2140.t1 NODE_3697_length_2932_cov_38.5681_potentialcontaminant AUGUSTUS mRNA 149 1138 . - . ID=g2140.t1;Parent=g2140;Name=g2140.t1 NODE_3697_length_2932_cov_38.5681_potentialcontaminant AUGUSTUS exon 149 1138 . - . ID=g2140.t1.exon1;Parent=g2140.t1 NODE_3697_length_2932_cov_38.5681_potentialcontaminant AUGUSTUS CDS 149 1138 . - 0 ID=cds.g2140.t1;Parent=g2140.t1 #PROT g2140.t1 g2140 MSLRHGVYCALWAAIVALSATYVADRLCDIPTAYDALYLVCECISLGLSLFNFTLLLRRPRILSCLDPATENGSQQSAHSRTSSPPPPLVHVAICCYTEPIGIVSATLASALAIVYPPDRIAVFLLDDGHNVAFAAELHSRFGSHFRHIRRPANRGAKAGNLNDFLNLTACEGHAADYILVLDADMACDAMIVARMLPYFRNQHTRHAHDRTHRSTQATLRHEVEQTAEGRCYMDPRPLAFVQLPQRFHPSPSTFDVAADEGRCYHDVILPARCAWGFASCIGTNVMFMRKALEAVGGFPEDMVCEDTALSMQLHARGWGSYYLLEDLAV # ORIGINAL: g12868.t1 original gene structure, not modified by PASA NODE_3720_length_2900_cov_74.0761 AUGUSTUS gene 10 2867 . - . ID=g12868;Name=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS mRNA 10 2867 . - . ID=g12868.t1;Parent=g12868;Name=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS exon 2523 2867 . - . ID=g12868.t1.exon1;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS CDS 2523 2867 . - 0 ID=cds.g12868.t1;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS exon 1461 2366 . - . ID=g12868.t1.exon2;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS CDS 1461 2366 . - 0 ID=cds.g12868.t1;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS exon 326 1384 . - . ID=g12868.t1.exon3;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS CDS 326 1384 . - 0 ID=cds.g12868.t1;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS exon 10 228 . - . ID=g12868.t1.exon4;Parent=g12868.t1 NODE_3720_length_2900_cov_74.0761 AUGUSTUS CDS 10 228 . - 0 ID=cds.g12868.t1;Parent=g12868.t1 #PROT g12868.t1 g12868 MAAATQDTVQEVTFRIGEDQRSDFSIDVTGIRSFARLKNVLKETFHAALRDVDPASIRVCIPDAMETKSTSTPHSSPDDRPLRKWPTVSDPAKTTPSSSQSTTRPTPHCRLRSAPPLRTARALGPILGGLIPADTRQRDGLDSVHIDLRFFPALRENEHLLRAIQVAYKKLFFDDTKHHSLRDVRPIFTTGERLICNVLAGRTQSGKTEAIARTVYIAAIALGVLPVVFVRCAGGQFTFAAIEKNIHSIARRAVRYVLDHVPEINESIAETFFAPIFVRASTIRRHPLLSLRNLQSPYIVLARQSKANVAALFTETRPGSVASRIAEAERNDDEPMPYAVFSDEDDSSISTKSRDGTQVEREAFQTNIAAFSAGYGDVDADDAYASTGSADEDDSSDGDVSSDAGLTDADREDREIVERPGYGTFIADIRASYAVARANYEASSMSHPYADTPARPLESLPQRHVSALITSTATKLIGEQNLLAQAVHRDFSDIPLISFSFNAKGVFQFYFCPALVAAARQSRVDLQELVKGICANVFVTAAYTEAMQGGPSTSQQLARDMHSAINRRNFNYTRHAQLLSERRGIKRIEFAYSGDILCASVAVVSELRIIHHYYDVAYAVFLHLRIAPLVVCVAGILANRQMTFKDSEHRFVLTDFLVDCCGRRHFELAIQTAGRICSCDRMERIQRRIFINESSLDELKSALSLYEGVLDACRSRRTLDHFGIVMDTIDPRNEGVAAVVDNGRHMAKPRIAKRFKDDLSESVGKLGPSQTFATNDERNRKVREAREAGRLQHTFMMSAENFHGDQQALTLRVHRALNDGKDNFFRRIHEGSAEAFWGLILQ* # PASA_UPDATE: g5298.t1, single gene model update, valid-1, status:[pasa:asmbl_4656,status:12], valid-1 NODE_2612_length_5663_cov_38.5349 . gene 1400 5647 . - . ID=g5298;Name=g5298.t1 NODE_2612_length_5663_cov_38.5349 . mRNA 1400 5647 . - . ID=g5298.t1;Parent=g5298;Name=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 5291 5647 . - . ID=g5298.t1.exon1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 5291 5647 . - 0 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 3764 4987 . - . ID=g5298.t1.exon2;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 3764 4987 . - 0 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 3307 3596 . - . ID=g5298.t1.exon3;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 3307 3596 . - 0 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 2967 3181 . - . ID=g5298.t1.exon4;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 2967 3181 . - 1 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 1912 2588 . - . ID=g5298.t1.exon5;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 1912 2588 . - 2 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . exon 1400 1739 . - . ID=g5298.t1.exon6;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . CDS 1566 1739 . - 0 ID=cds.g5298.t1;Parent=g5298.t1 NODE_2612_length_5663_cov_38.5349 . three_prime_UTR 1400 1565 . - . ID=g5298.t1.utr3p1;Parent=g5298.t1 #PROT g5298.t1 g5298 MHTFKPTTISQRDMSIELGDKSPKLQLLMRQVMQQKRASFFLHLPSRDEFPDYYEHVTRPIDLTTILHKVLEKEYYNVHLFHTDVALVTRNCVIYNGADDPHSRGAIGMLQYVEKSLGELFDDFTPPPFDLAKLEPPGDAPGDDAGGPSRDLSDIKVVNGESGLAAHMGERETKAAPKRKRKGCVSRAERERQRKRRKLLEAKNGATATTATDGNSAPDGPSHEKSDALATSALPDATQRMDGVSHAAAEKESVDAASGDVREACVEPAVSDKGMGVDVQTEAPAEASGASGAGEPSGAGGISPPAQAMGGSASGDAPWTVLALPEGWRPPKGSRPVTTRQPKLVSRDAPRAKKGKSGKKGGKKGRKTQRNAGAASSEATDGSAPSKRDVVNAKLFEVTVEGDMRRKALRPRRGAASEPVAPSSAVTVDAAAGAVSGSVEAEASCAGDSGALVVSASVASGQAADTRRCGFCGVIGNESCSASGRLLWAEGKDWVHSGCALWSSEVFEDVVGVLWKVDVALTRGRHMKCRECGRTGATVGCHDGKCKASYHYACAQAAGVGFFADKSTFCREHAKGCTREVATATMHCFNRTMLCARTKDWPTSCNAKGQHIRCGALVIVDYGRIFPRRSFFSKDIIYPVGYRARRTYWSTMDPTRLVAYECSISNNTLSGGADAVPVFNVRSDEGYFATGRTMDAVWNQLYEAVNMARDTLDPRRLRSLVSHNGAWLFGLSLPPVMHAIEMLRWSEYCTQYSFRYACRRALPVRHEDMTSTDGMSCARAVVFVRRSRADAAAHESEKFRIRIAAGDLPPGATGPAGSLFQGNLQLPIGMQYRQMKENRWQTIVRRSGIHGWGLFACRDFEGGELVIEYVGEIIRESVADLREAAYDAQGIGCYMFRLDDTTVVDATVKGNTARYCNHCCEPNCLTRICQVDGCRRILFFTSKKVLAGDEFTVDYRMSEEDEKIPCRCGARTCKGTLN* # PASA_UPDATE: g1352.t1, single gene model update, valid-1, status:[pasa:asmbl_6347,status:12], valid-1 NODE_3640_length_3054_cov_41.7043 . gene 1 3054 . - . ID=g1352;Name=g1352.t1 NODE_3640_length_3054_cov_41.7043 . mRNA 1 3054 . - . ID=g1352.t1;Parent=g1352;Name=g1352.t1 NODE_3640_length_3054_cov_41.7043 . five_prime_UTR 3054 3054 . - . ID=g1352.t1.utr5p1;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . exon 2895 3054 . - . ID=g1352.t1.exon1;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . CDS 2895 3053 . - 0 ID=cds.g1352.t1;Parent=g1352.t1;5_prime_partial=true NODE_3640_length_3054_cov_41.7043 . exon 2622 2735 . - . ID=g1352.t1.exon2;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . CDS 2622 2735 . - 0 ID=cds.g1352.t1;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . exon 2292 2399 . - . ID=g1352.t1.exon3;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . CDS 2292 2399 . - 0 ID=cds.g1352.t1;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . exon 1331 2034 . - . ID=g1352.t1.exon4;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . CDS 1331 2034 . - 0 ID=cds.g1352.t1;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . exon 1 1129 . - . ID=g1352.t1.exon5;Parent=g1352.t1 NODE_3640_length_3054_cov_41.7043 . CDS 1 1129 . - 1 ID=cds.g1352.t1;Parent=g1352.t1;3_prime_partial=true #PROT g1352.t1 g1352 AIYFNGKKIQVTILSSQFVENDALNSDYSDGGVAVIEGSAVVTYSGCLFRGNQGYYSGVTWARGSSVIIYDNCTFTENVGIIGGAAYMESSALLTVSKCNFFGNLATNGGVIFGGAQVVDSVFENNKVTTSGAVANVPSSYSMLTMTNCTFRGNTAGEAGGLVYVGSIGRSGYQPCVKVAGGSASNSTAEIGGLFFVKSGLGEDRDQTPLPPPSDNVPSLVVEDFSVSSSRATEGGVVAATAGGVVVFRRLTGSNNAANFGGVGHISDNSRILCTDCSLQKSSGSSGGAFFVTGKGVLTLLSSRVERSIANGGGGGISMLLDGSLVMSNSSGMGNGALYGGFLAMSGRSTAFISDSTIAWNMVDDYAGAISLSANSALSLSNVSVSSNCAVGQGGAIRIEGSAALVANPTDAMATSATFANNGASEGGALYVRNGATVKMVSAVLRGNTGDKAAGAVFVTDCGTLDLQSALMTENVVEGGDGGAIFFEASSTVSISRSNVTENSAENGGAVCGRISSAAQQSSCRTEASPYVGIDAALEASRGYTCKGSIPTLTVVGSVFSSNVAEEDGGAIAMTGGRLRVTANTLIDSNTATSGRGGGLFFERQTVNSTGNVAFNQVYISNNKAGTTGGGIHIYKMGEAFFANVTVTRNSADVGGGIFNSNPSSLVQNQSLVLFGNMASLYGTDKTSPGTTLKIKNLLVSGDLSLPTGGTMPSFALELYDAYDVLAKSGGSNYEIKA # ORIGINAL: g890.t1 original gene structure, not modified by PASA NODE_2616_length_5648_cov_42.4384 AUGUSTUS gene 87 237 . - . ID=g890;Name=g890.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS mRNA 87 237 . - . ID=g890.t1;Parent=g890;Name=g890.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 87 237 . - . ID=g890.t1.exon1;Parent=g890.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 87 237 . - 0 ID=cds.g890.t1;Parent=g890.t1 #PROT g890.t1 g890 MGILKKYLDLFVAKGRFQPDQYWPGEVVFGKIVVAHSVGIQSILLKFKGK # ORIGINAL: g892.t1 original gene structure, not modified by PASA NODE_2616_length_5648_cov_42.4384 AUGUSTUS gene 2865 5547 . - . ID=g892;Name=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS mRNA 2865 5547 . - . ID=g892.t1;Parent=g892;Name=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 5224 5547 . - . ID=g892.t1.exon1;Parent=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 5224 5547 . - 0 ID=cds.g892.t1;Parent=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 4595 5050 . - . ID=g892.t1.exon2;Parent=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 4595 5050 . - 0 ID=cds.g892.t1;Parent=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 2865 4460 . - . ID=g892.t1.exon3;Parent=g892.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 2865 4460 . - 0 ID=cds.g892.t1;Parent=g892.t1 #PROT g892.t1 g892 MRDDLIALANTHCASTVARGGGVVDVEVRIIPRRTDTRRDTPGRNYGANHCTHTASLVLHVLVDVRDIMGANCVTAVAGGIAPVVEQAVGGRVACHILSNCCPRRMAEARFRIPVAALGYKGLEGAQVASRLLDMQRWAEDDLFRAVTNNKGIMNGIDAVAVATGQDSRAIESAAHAHAASVWNGAYGPLAEYWMDDAASVGDGVGACGNGLAGDDRRFFCGRLELPMPVGVHGGVLKTNPAYAYTLGVLGDPDARTLAMIMVSVGLAQNFAALRALCTEGIRRGHMSLHARNIAIAAGAPTHAVPEVVAYMVKTGRVNSESAALYLKAHKMHTELYSSTASLPLLSADAPEREHAAPSMFFFEEAPRSQSPGIALGPDSHVAVHERLSFNVAFETLCDRPVYIEFDCDREHQPLHQSLFGTKGHSWLTSVFAALDSIRLACDDAPRATYALQKRLKTLSILMNVLASRLAHRHPGPTHDVVLAANSAAAGVRRHGIRSLSGGGDEESDADVVLAADSVRESAHEHRRVCRLDTLALERIRARKETELLVGLPLLLSLWDVFEYRVEQWLGGHSDLARLLRKEQYLIIAAIVGSAKTGAATMPATMDEFLARHAKRFQVTMFLLIGAASLNDSMLTPRRVRYIADVGAYLELEGTIAHDIARYHATVCEPAPAHSPAPHTAGSDGGSSSGCAGDDVASDANAGVGSSGVSSLVAGPSVHVSPSANCYAFWLQLNAQEHSRVSVRAFLSEMSGIVSARRAVLDSEYDDIFGQDRIAAASRNIALYYGIAAFT* # ORIGINAL: g891.t1 original gene structure, not modified by PASA NODE_2616_length_5648_cov_42.4384 AUGUSTUS gene 935 2684 . + . ID=g891;Name=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS mRNA 935 2684 . + . ID=g891.t1;Parent=g891;Name=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 935 1420 . + . ID=g891.t1.exon1;Parent=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 935 1420 . + 0 ID=cds.g891.t1;Parent=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 1627 1904 . + . ID=g891.t1.exon2;Parent=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 1627 1904 . + 0 ID=cds.g891.t1;Parent=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS exon 2189 2684 . + . ID=g891.t1.exon3;Parent=g891.t1 NODE_2616_length_5648_cov_42.4384 AUGUSTUS CDS 2189 2684 . + 1 ID=cds.g891.t1;Parent=g891.t1 #PROT g891.t1 g891 MAHRQPLVSALVLLSLIAALEFLWWYRCNNGTADIPLGTQRDGTHSAAGTVAYGAGNGIAAADVVAGAKGHIERRENGSASTDGAGSDTPTAATAAYPAACPAYLSGAHVMRPPNDLPLCDWSLVSSQSFAGVWEKTCDAATLIEANPVQCAYPAFGATVGVMWHSLRFLGVSVDTWKSWTMIDDRTLASMPADTWIACTCVGEAVQAFLKRCRQEEPLARAACRTLFPDGGPLRVSAFNTDDGTALNGTRVLAVRVAEYFDRTFNGTLVLFAPASGHVGCREKIESFSMNTVNRARGGDTKSNGTRPSWVASNATDTAPKIITDALPATSTDDAKADIYNWHRAVEAQVHWLAAFNGARHEQSMRVMNMTAPMSPRPEAHVGARTVDGKSITDCLHWCQPGPIDVAAQMLFKALLSLP* # ORIGINAL: g2730.t1 original gene structure, not modified by PASA NODE_5056_length_1047_cov_80.1584_potentialcontaminant AUGUSTUS gene 142 199 . - . ID=g2730;Name=g2730.t1 NODE_5056_length_1047_cov_80.1584_potentialcontaminant AUGUSTUS mRNA 142 199 . - . ID=g2730.t1;Parent=g2730;Name=g2730.t1 NODE_5056_length_1047_cov_80.1584_potentialcontaminant AUGUSTUS exon 142 199 . - . ID=g2730.t1.exon1;Parent=g2730.t1 NODE_5056_length_1047_cov_80.1584_potentialcontaminant AUGUSTUS CDS 142 199 . - 0 ID=cds.g2730.t1;Parent=g2730.t1 #PROT g2730.t1 g2730 MSQSGTKLFVARLPYAVCK # PASA_UPDATE: g7689.t1, single gene model update, valid-1, status:[pasa:asmbl_6747,status:12], valid-1 NODE_3935_length_2489_cov_67.6922 . gene 401 1858 . + . ID=g7689;Name=g7689.t1 NODE_3935_length_2489_cov_67.6922 . mRNA 401 1858 . + . ID=g7689.t1;Parent=g7689;Name=g7689.t1 NODE_3935_length_2489_cov_67.6922 . five_prime_UTR 401 441 . + . ID=g7689.t1.utr5p1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 401 537 . + . ID=g7689.t1.exon1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 442 537 . + 0 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 642 848 . + . ID=g7689.t1.exon2;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 642 848 . + 0 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 949 1047 . + . ID=g7689.t1.exon3;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 949 1047 . + 0 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 1170 1221 . + . ID=g7689.t1.exon4;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 1170 1221 . + 0 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 1364 1420 . + . ID=g7689.t1.exon5;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 1364 1420 . + 2 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . exon 1582 1858 . + . ID=g7689.t1.exon6;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . CDS 1582 1667 . + 2 ID=cds.g7689.t1;Parent=g7689.t1 NODE_3935_length_2489_cov_67.6922 . three_prime_UTR 1668 1858 . + . ID=g7689.t1.utr3p1;Parent=g7689.t1 #PROT g7689.t1 g7689 MSCTIVDATTVHEEKWIRMKRITYKDPLGVQRTWDAVERTTRRGEVDAVEVVCVLRGVHKEPMIITVSQFRPPLGLVCVELPAGLIDAGETPEAAAIRELKEETGYIGKVVSVGPVVYTDPGITNANQRNVTVEVDETLPENANPKACCEDGEFIQVKLVPLSQLFSYLQAEEASGKGIDSRLFSLATGLQVASQFLP* # ORIGINAL: g7690.t1 original gene structure, not modified by PASA NODE_3935_length_2489_cov_67.6922 AUGUSTUS gene 1892 2188 . - . ID=g7690;Name=g7690.t1 NODE_3935_length_2489_cov_67.6922 AUGUSTUS mRNA 1892 2188 . - . ID=g7690.t1;Parent=g7690;Name=g7690.t1 NODE_3935_length_2489_cov_67.6922 AUGUSTUS exon 1892 2188 . - . ID=g7690.t1.exon1;Parent=g7690.t1 NODE_3935_length_2489_cov_67.6922 AUGUSTUS CDS 1892 2188 . - 0 ID=cds.g7690.t1;Parent=g7690.t1 #PROT g7690.t1 g7690 MAFQPPGYVPRGATAQDTSAASAVDLRSRFQARPASPDIKGLGFGDDDASDDDDQQRTKRGSKSSRRAKGNKTAVNSANMFALLGDGNDGATSDSLDG* # ORIGINAL: g2944.t1 original gene structure, not modified by PASA NODE_6895_length_496_cov_42.4703_potentialcontaminant AUGUSTUS gene 44 496 . + . ID=g2944;Name=g2944.t1 NODE_6895_length_496_cov_42.4703_potentialcontaminant AUGUSTUS mRNA 44 496 . + . ID=g2944.t1;Parent=g2944;Name=g2944.t1 NODE_6895_length_496_cov_42.4703_potentialcontaminant AUGUSTUS exon 44 496 . + . ID=g2944.t1.exon1;Parent=g2944.t1 NODE_6895_length_496_cov_42.4703_potentialcontaminant AUGUSTUS CDS 44 496 . + 2 ID=cds.g2944.t1;Parent=g2944.t1 #PROT g2944.t1 g2944 DGGAVALFENTSSRISSSDFVSCGAAGKGGGLMIAGDAQADMTAGRIIASASGFGAGACVTSKRHCSFTSVEFALNTAGRGAGLFLGTDTSVTTTECYFLSSQTIFGGGGVAAEIVRMWVSTRDMFAYLSGADGGAVSVSQNVDYMQAGQ # ORIGINAL: g13010.t1 original gene structure, not modified by PASA NODE_1016_length_14668_cov_44.3124 AUGUSTUS gene 2325 3038 . - . ID=g13010;Name=g13010.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS mRNA 2325 3038 . - . ID=g13010.t1;Parent=g13010;Name=g13010.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 2325 3038 . - . ID=g13010.t1.exon1;Parent=g13010.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 2325 3038 . - 0 ID=cds.g13010.t1;Parent=g13010.t1 #PROT g13010.t1 g13010 MTPALLLDDTQSAYSFQSSSALEQSMPCGLTATSLEALPFANASSEKFSLNPNDPIAVAALQAAQRIMFSASFAAASHNFFGNAPFGVDASSDLSDFSDGVDPMLDAFVGFPDDMMVPEQLEDIKPFASMGSTTTSGRSSSVARSNVGRRGRPAPIYDALRENMGPLDPKVEKYLDRRKRNNAAAKKCRDAKKAKEDQIVSVMEQLRAENAKLRDSLSTLESELRRLREAATNAPSK* # PASA_UPDATE: g13012.t1, single gene model update, valid-1, status:[pasa:asmbl_56,status:3], valid-1 NODE_1016_length_14668_cov_44.3124 . gene 10660 12563 . + . ID=g13012;Name=g13012.t1 NODE_1016_length_14668_cov_44.3124 . mRNA 10660 12563 . + . ID=g13012.t1;Parent=g13012;Name=g13012.t1 NODE_1016_length_14668_cov_44.3124 . five_prime_UTR 10660 10843 . + . ID=g13012.t1.utr5p1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . exon 10660 11085 . + . ID=g13012.t1.exon1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . CDS 10844 11085 . + 0 ID=cds.g13012.t1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . exon 11294 11471 . + . ID=g13012.t1.exon2;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . CDS 11294 11471 . + 1 ID=cds.g13012.t1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . exon 11823 11962 . + . ID=g13012.t1.exon3;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . CDS 11823 11962 . + 0 ID=cds.g13012.t1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . exon 12289 12563 . + . ID=g13012.t1.exon4;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . CDS 12289 12406 . + 1 ID=cds.g13012.t1;Parent=g13012.t1 NODE_1016_length_14668_cov_44.3124 . three_prime_UTR 12407 12563 . + . ID=g13012.t1.utr3p1;Parent=g13012.t1 #PROT g13012.t1 g13012 MADKEHVESDGEGTAGAAEVEASEKKIITALEDPHNYTIKHPLEHKWVLWYDNPGKKVDQSSWELSLKRIIDFDTVEDFWAVYNNIVPASRLATGSNYHLFRDGIQPKWEDSQNKYGGKWVWMIPKTTKKEKIDEYWLYTMLSVIGESMDEHGNEVCGAVVSIRKPQSRLAVWTRTSDNQATAESIGRRFKEALCAGVVVTLNYQVHNDALRSNKSYSNRPLYEV* # ORIGINAL: g13011.t1 original gene structure, not modified by PASA NODE_1016_length_14668_cov_44.3124 AUGUSTUS gene 6369 9709 . + . ID=g13011;Name=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS mRNA 6369 9709 . + . ID=g13011.t1;Parent=g13011;Name=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 6369 6409 . + . ID=g13011.t1.exon1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 6369 6409 . + 0 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 6641 6941 . + . ID=g13011.t1.exon2;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 6641 6941 . + 1 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 7144 7353 . + . ID=g13011.t1.exon3;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 7144 7353 . + 0 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 7596 7695 . + . ID=g13011.t1.exon4;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 7596 7695 . + 0 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 7872 8095 . + . ID=g13011.t1.exon5;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 7872 8095 . + 2 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 8269 8575 . + . ID=g13011.t1.exon6;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 8269 8575 . + 0 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 8712 8945 . + . ID=g13011.t1.exon7;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 8712 8945 . + 2 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 9138 9328 . + . ID=g13011.t1.exon8;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 9138 9328 . + 2 ID=cds.g13011.t1;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 9473 9709 . + . ID=g13011.t1.exon9;Parent=g13011.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 9473 9709 . + 0 ID=cds.g13011.t1;Parent=g13011.t1 #PROT g13011.t1 g13011 MSGIQQPGQMFSYGGGDSSSAPKPGGLPLLNLNKYKPQPVQQQQQPKWPTGAPATIDATQQQQQLQQAQAQRTHKYGTSSSTVGNGGMTSFPPPPLPAFSKPLGDPLFKDGEYKSTSGTISNGVKATDAAVRAPKSIKAKGVRSDESDRERSDSPVPNDDVPAAPSLPLTPAAALKLWMPYMSQYEHGEVLDSPQVYFVGPNAKKKIRGVAGAANNNGYDDSRGDYLIQMNDHLSYRYEVLDLLGKGSFGQVVKCIDHKTDQQVAVKIIRNKKRFHHQALIEVKILDFLKKHDRDNSHNIIHMTEYFYFRNHLCISFELMSLNLYEFIKNNNFQGFSLSLIRRFAVQILQCLKLLKEQNIIHCDLKPENVLLKHSTKSAIKVIDFGSSCFENERVYTYIQSRFYRSPEVILGQPYGTPIDMWSFGCILAELYTGYPLFPGENEVEQLACIMEILGVPNQRIIERSSRRKLFFDSNNLPRIVANSRGKKRRPGSKDMYTALRCTDHVFINFLERCLKWDPAERLTPEDALRHEWINEPRSNAVYGSSTQRQPTEKRRTGSIKPGGAPDAQGVPSTGVIGKGQGASIQSQFLPPIAKDSGKVVSDSYGAKDQYYYG* # ORIGINAL: g13008.t1 original gene structure, not modified by PASA NODE_1016_length_14668_cov_44.3124 AUGUSTUS gene 79 901 . + . ID=g13008;Name=g13008.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS mRNA 79 901 . + . ID=g13008.t1;Parent=g13008;Name=g13008.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 79 190 . + . ID=g13008.t1.exon1;Parent=g13008.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 79 190 . + 1 ID=cds.g13008.t1;Parent=g13008.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 707 901 . + . ID=g13008.t1.exon2;Parent=g13008.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 707 901 . + 0 ID=cds.g13008.t1;Parent=g13008.t1 #PROT g13008.t1 g13008 QAWQDLGDLAKEDAQREFCNTMAKLIPAWTAWVKDQLDVIRQREEEERRKRAEEERIANERRAAEERRRKDAEEAAERERQRELEKQKQEQEQNQQQQQQQ* # ORIGINAL: g13009.t1 original gene structure, not modified by PASA NODE_1016_length_14668_cov_44.3124 AUGUSTUS gene 1103 1465 . + . ID=g13009;Name=g13009.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS mRNA 1103 1465 . + . ID=g13009.t1;Parent=g13009;Name=g13009.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 1103 1465 . + . ID=g13009.t1.exon1;Parent=g13009.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 1103 1465 . + 0 ID=cds.g13009.t1;Parent=g13009.t1 #PROT g13009.t1 g13009 MTVRVPTPYDDCTITWEFATVDYDIAFGVSYEGPEGAVFGEAAEAAKITESSQGKLLSVPILPCLRVDSHNAVVTGSHTSHKRGIYLLKFDNAYSMMRSKTVYYRVFSRAAPRPLPKSSV* # ORIGINAL: g13013.t1 original gene structure, not modified by PASA NODE_1016_length_14668_cov_44.3124 AUGUSTUS gene 13624 14618 . + . ID=g13013;Name=g13013.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS mRNA 13624 14618 . + . ID=g13013.t1;Parent=g13013;Name=g13013.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS exon 13624 14618 . + . ID=g13013.t1.exon1;Parent=g13013.t1 NODE_1016_length_14668_cov_44.3124 AUGUSTUS CDS 13624 14618 . + 0 ID=cds.g13013.t1;Parent=g13013.t1 #PROT g13013.t1 g13013 MGLFGCCATPDSLSFSGERLKTFPPEVSRAERTLVELDIDGNELPSIPASLNHCRRLVRFTACENFLKQLPFGFGRLTALEEVRLSDNQISELPEDIRELKKLRLFYANMNALGLLPSGFTALTSLQVLELSENQLTFLPTDLGSLRALVELWLRENMLRSIPASLGQLTALTKLGLSGNAITDLPSEIGQLVNLTELWLGDNELTELPDEFIRLKSLKVLELSDNHLASLPDDFGSLRQLTDLWLAGNELRRLPETLGMLQSLSALYLERNHLVELPETFTDLANLKEVRLTTNDLETLPSTIGKLSKLETLYCDENHLEAIPREIGLCL # ORIGINAL: g8350.t1 original gene structure, not modified by PASA NODE_932_length_15764_cov_41.9303 AUGUSTUS gene 296 6070 . - . ID=g8350;Name=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS mRNA 296 6070 . - . ID=g8350.t1;Parent=g8350;Name=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 4397 6070 . - . ID=g8350.t1.exon1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 4397 6070 . - 0 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 3513 4252 . - . ID=g8350.t1.exon2;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 3513 4252 . - 0 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 3146 3232 . - . ID=g8350.t1.exon3;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 3146 3232 . - 1 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 2762 2835 . - . ID=g8350.t1.exon4;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 2762 2835 . - 1 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 2124 2283 . - . ID=g8350.t1.exon5;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 2124 2283 . - 2 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 1707 1747 . - . ID=g8350.t1.exon6;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 1707 1747 . - 1 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 1323 1494 . - . ID=g8350.t1.exon7;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 1323 1494 . - 2 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 958 1099 . - . ID=g8350.t1.exon8;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 958 1099 . - 1 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 636 749 . - . ID=g8350.t1.exon9;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 636 749 . - 0 ID=cds.g8350.t1;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 296 389 . - . ID=g8350.t1.exon10;Parent=g8350.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 296 389 . - 0 ID=cds.g8350.t1;Parent=g8350.t1 #PROT g8350.t1 g8350 MAGLRALLVALAVALAILAPLQHHCCVDALTQVYVDPANAADGAADGTVAHPFATLALGLSSAVSAAATDNATIVLAAANYITTSAAGFAVSTATPFFVTISSASNSFTDTAIVCGPFASSIGISVTGAVLNFMVKGVSLTNCTNNALRVSGTSVVYASNIRAYANSLEPAILVQNSGKFYIGASEVSGNWRASGKGGAGLSVINGANADVTSVLFKGNNATIGTSTGGAIVVTDTAQLTIRDSFFTQNSASDTGACIGPLLTSTTYVYNTKFWLNTCPQGAAAAPANSALVVFTNCTFLNNTVTDKGGAFHTKDTSRLQVYGSYAFGNSARVAGGFGYFKDSSIVTVSDTTLESNLASSTGGAIFLRYVPVVTMDNVRFLRNGAPLGGGGLYVIATADGKTNGVTFNLTNSLFDSNAGGQGGGLYLASPFETYARLDNVTFYKNIATDAGGGVYLAQLNMRTKFFNNLKFTNNTAATSGGAIYAASNTSIPICTTCTYTTNFASLYGSTMGGAIAKIGWYPNTQASTFGTEVRTGDYLNTTYVQLVDLFNQEVNPGDKYYLNLVFARTYVVPPSASVDPTAIVLGESLRAFINGHILIRDIFVAGLPGKYTIRTTATLAADASVTFNVDHNITVTDCGDGFVRQSLPSYPSYWKCAAAVCSLYGCANGKCNYTDSCICDAGWTGPSCHIALCPAGCKNGKCTSPGVCQCDSLYYSHDCSQSYILNAIVPVVVVVGVVAAILLIRAYRIRAARIGRVWEIPHDDIQFGASKNAKGSSASLAKSLGSLASSNSGADGQIFIKDAMWQTMRVAIKSYRLGSNGVQSNMLREFRILGELRHSNLVTFHGYSISPAMLHTVIEYCERGSLEDVVFNQNIELDWIFKYSLARDAASALQYLHQSELAFHGRLKSSNCIIDGRWVLKLTDFGMESVRSLERDTFIPDNLDNEILRSRIWMSPEILAQTIADAKHTNLPDAMRRSGDIYAFGLLFIQMIDRDTPFSSHDLCEDTLAGVASGKITPTIPDNTPSKLKPLIEMCVSGGDRPSATSVLAHLKKIDPQKGNVTDNMSRMLQRYATNLEGLVQERTQALAEEKKKTELLLY # ORIGINAL: g8351.t1 original gene structure, not modified by PASA NODE_932_length_15764_cov_41.9303 AUGUSTUS gene 7366 9812 . + . ID=g8351;Name=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS mRNA 7366 9812 . + . ID=g8351.t1;Parent=g8351;Name=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 7366 7713 . + . ID=g8351.t1.exon1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 7366 7713 . + 0 ID=cds.g8351.t1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 7941 8003 . + . ID=g8351.t1.exon2;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 7941 8003 . + 0 ID=cds.g8351.t1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 8179 8318 . + . ID=g8351.t1.exon3;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 8179 8318 . + 0 ID=cds.g8351.t1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 8589 9126 . + . ID=g8351.t1.exon4;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 8589 9126 . + 1 ID=cds.g8351.t1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 9394 9540 . + . ID=g8351.t1.exon5;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 9394 9540 . + 0 ID=cds.g8351.t1;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 9672 9812 . + . ID=g8351.t1.exon6;Parent=g8351.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 9672 9812 . + 0 ID=cds.g8351.t1;Parent=g8351.t1 #PROT g8351.t1 g8351 MTRLDNGELNGVANGNDDGLRPLVVQKFGGTSVGTGKRMLEVAKIVKDSQQSDRVIVVLSAMSSYVKADGTTSRLIRAASEAVEGNHKEYAKILNSIKTSHLVAIHEALGDTPASQTLQEEINEEVDLLRSFLEAIAVIGELSPRSNDVVLGLGEKLSARIFATVLRETGVDAEYINLDNVIERASSFTQCDTEFFSYVRRRLSEVVSACNCKVPVVTGFFGFVPNGIIESVGRGYTDFTAALISAGLGARELQIWKEVDGIFTADPRKVEGAVVLPRITPGEAAELTFYGSEVIHPFTMEQVIREKIPIRIKNTFRPELDGTVIDPNDFETPAAFKRGAVAVTAKDNVTVINLHSNRKLGSQGFFAQVFSILERNRISIDMISTSEVNISMTVGRAKNLDKALKELESIGQVSVNDSMAIVSLVGHGMKRTVGVAGEMFCVLGKHDIRHKQNSLKME* # ORIGINAL: g8352.t1 original gene structure, not modified by PASA NODE_932_length_15764_cov_41.9303 AUGUSTUS gene 10627 15352 . - . ID=g8352;Name=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS mRNA 10627 15352 . - . ID=g8352.t1;Parent=g8352;Name=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 15191 15352 . - . ID=g8352.t1.exon1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 15191 15352 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 14824 14996 . - . ID=g8352.t1.exon2;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 14824 14996 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 14147 14661 . - . ID=g8352.t1.exon3;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 14147 14661 . - 1 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 13071 13972 . - . ID=g8352.t1.exon4;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 13071 13972 . - 2 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 12500 12856 . - . ID=g8352.t1.exon5;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 12500 12856 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 11986 12333 . - . ID=g8352.t1.exon6;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 11986 12333 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 11648 11699 . - . ID=g8352.t1.exon7;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 11648 11699 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 11234 11403 . - . ID=g8352.t1.exon8;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 11234 11403 . - 2 ID=cds.g8352.t1;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS exon 10627 11016 . - . ID=g8352.t1.exon9;Parent=g8352.t1 NODE_932_length_15764_cov_41.9303 AUGUSTUS CDS 10627 11016 . - 0 ID=cds.g8352.t1;Parent=g8352.t1 #PROT g8352.t1 g8352 MINGKYLKTEIHNLSRFISVMKFRPLVWRNTHPYVLCDRMEDLTDPEEMRKNPKIDRSICLYGFVRGTNLKPAMKVHIPGCGDFRMRDVSEIPDPVPLPSKEKKRSLSEKERLLYAPMSDIGDILYDKDAVYIDIGGNNSGPSKKAKAAGSEDEDEEGEGNEDEEMADAPGEQGPGEAMLSGLIDAKHTLNDRMADSQMQLFSGGASIHASQAGSLFEDGALAVGGANGGAKKATGIPTEVKVRDGNGRMRRRAMFGDEDNDDDDDDSDGNDDDDDDGGDDDEDSDGGRPRNGFGLDDDDEVEEDLHFEGDSDDDDGVTPQFTARNKPVTGNATDDDSDDEQGADGGDGGAESVLRWKNNIADRAAEMFRQRQVRNIMQLVYGDDYRSGSSGSKQQTPSDKKKGGREGPRECDGHEDDGEGDGLFRVKRRAGINDEKIKGRSVGDGGVLDNDDSSKYTDLSVDWTTPDALTSIRNRFVTGAWSETEDAAKLLAADAANALDDDKDEDVYGDFEDLETGEKFVGRAKDGGGEEDADSGEDDADTSEMKRLKEKKQQLKEQFDIGYDASANVEKNKDDEAPMPGAEAGEESLYDKTKRQMEEQRRMNLTAFSSEDDAMRVRLEGHRPGKYVRIEIERCPCEFVDNFDPRYPVICGGLLTSEEGMGFVQVRIKKHRWFRKILKTNDPLIFSLGWRRFQSIPIYAVQDHNMRNRMLKYTPQHMHCIATFYGPLVPPNTGILAVQTLAGSTPHFRVAATGVVIELDQSAAIVKKLKLTGAPMKVYKNTAFIKEMFSSPLEVAKFEGAAIRTVSGIRGQVKKAVRSPEGAFRATFEDKILMSDIVFLRAWYPVSPVKFYNPVTSLLLQEKAAWQGMRTTGQIRKELKEAPPQKADSEYKPIERVVRRFNPLKIPKTLQAELPFASKPKLPTARKNASLLTKRAVVMEPAERRVHSLMQQLSTLRNEKARKRKVKQVEKKKEYTKKKTEMEERLADKRRKEKKRAFQTGNARDGSAPSGKRRKVGGDDD* # ORIGINAL: g6461.t1 original gene structure, not modified by PASA NODE_1060_length_14341_cov_42.9699 AUGUSTUS gene 12208 13892 . + . ID=g6461;Name=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS mRNA 12208 13892 . + . ID=g6461.t1;Parent=g6461;Name=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 12208 12217 . + . ID=g6461.t1.exon1;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 12208 12217 . + 0 ID=cds.g6461.t1;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 12339 12481 . + . ID=g6461.t1.exon2;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 12339 12481 . + 2 ID=cds.g6461.t1;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 12701 12914 . + . ID=g6461.t1.exon3;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 12701 12914 . + 0 ID=cds.g6461.t1;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 13357 13512 . + . ID=g6461.t1.exon4;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 13357 13512 . + 2 ID=cds.g6461.t1;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 13714 13892 . + . ID=g6461.t1.exon5;Parent=g6461.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 13714 13892 . + 2 ID=cds.g6461.t1;Parent=g6461.t1 #PROT g6461.t1 g6461 MDKAHRSGLLSLALTLFIIACVGIPLWRWTTQTYRAPLPYDQVEQLLQLPPSIVSARIHIAVHGGALSNQRDVELAVAFCTGFPSPHGLTDAHGHRWLPAVTCSAVVTDDSEEVFDTSLSFRELDNILSTEHDSRPFHLRIVVVPDAGAGRVSKGDVAAVHMGRRRLWIAYAAEVDDAVMVHLGELAATHLAADVLLDETDRRKVHMFYCCNVVKSCVLLGRMRRFDEYGIRG* # ORIGINAL: g6460.t1 original gene structure, not modified by PASA NODE_1060_length_14341_cov_42.9699 AUGUSTUS gene 6335 11854 . - . ID=g6460;Name=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS mRNA 6335 11854 . - . ID=g6460.t1;Parent=g6460;Name=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 11711 11854 . - . ID=g6460.t1.exon1;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 11711 11854 . - 0 ID=cds.g6460.t1;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 10926 11121 . - . ID=g6460.t1.exon2;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 10926 11121 . - 0 ID=cds.g6460.t1;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 10449 10645 . - . ID=g6460.t1.exon3;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 10449 10645 . - 2 ID=cds.g6460.t1;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 8292 10251 . - . ID=g6460.t1.exon4;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 8292 10251 . - 0 ID=cds.g6460.t1;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS exon 6335 7929 . - . ID=g6460.t1.exon5;Parent=g6460.t1 NODE_1060_length_14341_cov_42.9699 AUGUSTUS CDS 6335 7929 . - 2 ID=cds.g6460.t1;Parent=g6460.t1 #PROT g6460.t1 g6460 MATQRMQAGVWRAAAVPKCAQFVSSAYEGPIHSLEFVTERIVLCGQGSKQIYAAEIVVEYDDAEPECPVRVSLADLFSLKMGDRVLNCEWLRSDSSIQRNDVIAIALAHNYVEIWSAEPSPRCLSRAQSAEHCLLYSSAFYGATVAQLTIASGTVFNEVQLWQLDDRVQHQVVTGLGGQAVAAPVATFADFPVSKRLLGHEGVIFAISFLGVANMDSPDTHSPHILCSVSDDRSIRVWDVSGRGLPTGGGALTKAHERVRDARVDGDRLVTVLSTQVSGVAERSTASASQLGDGCIDAALVMYGHGARVWDVRLTPRYIVTIAEDSTGCVWSYDGVRRAVWAGHEGKSVWALAVDPTGTLAATGGGDSAIRTWELSRVGTADADHKSPREKEVDLCIPPVDESVVRALEARAAAVPPAVADADDAVTAANDSADAHVCDAAVDDDDALRRRPTRAKPDMPRSVCVVGDGRLLISAVSGVLFFCELGGNSSDGAALSDSADTSGLVPGASVAQGPAEGIESPGAAAFAWTPIYFASELATYQVIAADAALEVVALGSVGGAVHVAGFGNMSGCRPARVAFHRAKVTHMYVGRMAGCNARDAFELGTCSTGGDFVWQRVFVSPDSAECASLSVTAIARFTLPASAIAQSFCVAAGGALAVCGDRDGNVHILSPPHASAANDPLANPCTPSFTLSKVHGKESVTSLRFGGDGLLYSTGRNGYYCSFALVTCADGTVTLEPQLKHKFPKGMEWLDRLIFADASGNSGAAVPTLLLGFHRTDFVVWDLVHNRYIFKQNCGGGHRGYDFWCGDVSVSAYMFAYIRMGAVKVHVLAQERGDVSSLSLVKRPFHGREVSALCIGGCIARKSGATSTIVFSGGEDRGVVVSELCTDGPHVHFVRRARLEGHTSNIRAMTFLRTEFSDEALSGFLFSGGGKETLRCWSVGVRPSSDAGDPNSLKVDCTSFAANDAVSEGTVPVDSRIMGVIVVDAASVTCAVEKECGGSDASLASLSAGDAKLRHIVPVVYIADSDGSIAAFALNSKRKLVKFARGEYHSGCTLSIATAACDGIAGCVLFSGSTDGRICVWDARPTARQALAAAGTLDQRKLRMARMSPVAVLRAHQSGVNCIAVALVSAAAVTGDDGPCVRATFRIVSGGDDNALFVASIEVILLGEHIAEKEGVSVTVPCAARVVGVRCARHPAAHGSSVKGVCFLGTSSGVAGSEAQVVSISTDQRVIVWRIEPDTLEPCDAFVTPPLSSPARHQRTDTTTYCDPAATDASSAGARARPHASNATVAMSQDYLFPCGGPQSGRFPLDGPSHPDCLTMLQGVFAEVCDASALAANDAGSILVIGGVGVQVLRRPNLLSVKK* # PASA_UPDATE: g6457.t1, single gene model update, valid-1, status:[pasa:asmbl_227,status:12], valid-1 NODE_1060_length_14341_cov_42.9699 . gene 256 935 . + . ID=g6457;Name=g6457.t1 NODE_1060_length_14341_cov_42.9699 . mRNA 256 935 . + . ID=g6457.t1;Parent=g6457;Name=g6457.t1 NODE_1060_length_14341_cov_42.9699 . exon 256 788 . + . ID=g6457.t1.exon1;Parent=g6457.t1 NODE_1060_length_14341_cov_42.9699 . CDS 256 788 . + 0 ID=cds.g6457.t1;Parent=g6457.t1;5_prime_partial=true NODE_1060_length_14341_cov_42.9699 . exon 878 935 . + . ID=g6457.t1.exon2;Parent=g6457.t1 NODE_1060_length_14341_cov_42.9699 . CDS 878 935 . + 1 ID=cds.g6457.t1;Parent=g6457.t1 #PROT g6457.t1 g6457 RHHANRPDDRTDDSTDDHTDDHTDDHTDDHTDGTDGTDGTDDRTDDRRDDSREDRPDDRTDDRRDHRRDDRRDDRTDRPDDRPDRTDDHRNDHRDDHRDDRTDDRPDDCPRANRQALLQQRLGCATQQLSGKPFQQQRKPTSKEHPVHVPPQRPVALRLGDSSQQVGGTSRQETDPSRDGQDAQLCCAERRSPDWH* # PASA_UPDATE: g6458.t1, single gene model update, valid-1, status:[pasa:asmbl_228,status:12], valid-1 NODE_1060_length_14341_cov_42.9699 . gene 1675 2336 . + . ID=g6458;Name=g6458.t1 NODE_1060_length_14341_cov_42.9699 . mRNA 1675 2336 . + . ID=g6458.t1;Parent=g6458;Name=g6458.t1 NODE_1060_length_14341_cov_42.9699 . five_prime_UTR 1675 1734 . + . ID=g6458.t1.utr5p1;Parent=g6458.t1 NODE_1060_length_14341_cov_42.9699 . five_prime_UTR 1883 1890 . + . ID=g6458.t1.utr5p2;Parent=g6458.t1 NODE_1060_length_14341_cov_42.9699 . exon 1675 1734 . + . ID=g6458.t1.exon1;Parent=g6458.t1 NODE_1060_length_14341_cov_42.9699 . exon 1883 2336 . + . ID=g6458.t1.exon2;Parent=g6458.t1 NODE_1060_length_14341_cov_42.9699 . CDS 1891 2160 . + 0 ID=cds.g6458.t1;Parent=g6458.t1 NODE_1060_length_14341_cov_42.9699 . three_prime_UTR 2161 2336 . + . ID=g6458.t1.utr3p1;Parent=g6458.t1 #PROT g6458.t1 g6458 MSDRKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG* # PASA_UPDATE: g6459.t1, single gene model update, valid-1, status:[pasa:asmbl_229,status:3], valid-1 NODE_1060_length_14341_cov_42.9699 . gene 2993 5679 . + . ID=g6459;Name=g6459.t1 NODE_1060_length_14341_cov_42.9699 . mRNA 2993 5679 . + . ID=g6459.t1;Parent=g6459;Name=g6459.t1 NODE_1060_length_14341_cov_42.9699 . five_prime_UTR 2993 3044 . + . ID=g6459.t1.utr5p1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 2993 3146 . + . ID=g6459.t1.exon1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 3045 3146 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 3544 3714 . + . ID=g6459.t1.exon2;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 3544 3714 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 3930 4025 . + . ID=g6459.t1.exon3;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 3930 4025 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 4275 4332 . + . ID=g6459.t1.exon4;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 4275 4332 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 4547 4611 . + . ID=g6459.t1.exon5;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 4547 4611 . + 2 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 4937 4995 . + . ID=g6459.t1.exon6;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 4937 4995 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 5160 5244 . + . ID=g6459.t1.exon7;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 5160 5244 . + 1 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . exon 5496 5679 . + . ID=g6459.t1.exon8;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . CDS 5496 5630 . + 0 ID=cds.g6459.t1;Parent=g6459.t1 NODE_1060_length_14341_cov_42.9699 . three_prime_UTR 5631 5679 . + . ID=g6459.t1.utr3p1;Parent=g6459.t1 #PROT g6459.t1 g6459 MKLFVVFTLLLAAAALCAAQYDDDEGLETTDAIQQTSDDDSVSSSGLVLEHAFGADAPFKRRGVITFKSLRGTSAVMKQDALTKADLRLLEALIIADGVYRVRVASHISATKANTHVMSFAKACLVAASEFEDSVTLHVEESGHIHGITYKTRDGSCGDSGMRKISDATFVTTVTLAHSHAGTEPYTAQAKAEAKKEAEGGKEPQKSFIERYWMYIVLIGVYMLVSGSTAQPEAGAQGGAAAGAQRPAVAGSGAGR* # ORIGINAL: g11672.t1 original gene structure, not modified by PASA NODE_913_length_15931_cov_38.7429 AUGUSTUS gene 9854 10907 . + . ID=g11672;Name=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS mRNA 9854 10907 . + . ID=g11672.t1;Parent=g11672;Name=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 9854 9981 . + . ID=g11672.t1.exon1;Parent=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 9854 9981 . + 0 ID=cds.g11672.t1;Parent=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 10262 10548 . + . ID=g11672.t1.exon2;Parent=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 10262 10548 . + 1 ID=cds.g11672.t1;Parent=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 10789 10907 . + . ID=g11672.t1.exon3;Parent=g11672.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 10789 10907 . + 2 ID=cds.g11672.t1;Parent=g11672.t1 #PROT g11672.t1 g11672 MRSMRDDFQRAEAACITDLLEGMKGGTRKSSVAPSELKAAFLKRLDQDRFQLDGKFGSLKKQRRAVRKEMWEKLVNSNLVFFDPKLTDREREAGANCLKGALVDMQYERWENVPLYITRGFALKPRGYLTIPYNFDVPSFLAHIDRNIGVIKVALREVVIDKLAKRDDAESAPTQPR* # PASA_UPDATE: g11670.t1, single gene model update, valid-1, status:[pasa:asmbl_9971,status:12],[pasa:asmbl_9974,status:12], valid-1 NODE_913_length_15931_cov_38.7429 . gene 2067 5528 . - . ID=g11670;Name=g11670.t1 NODE_913_length_15931_cov_38.7429 . mRNA 2067 5528 . - . ID=g11670.t1;Parent=g11670;Name=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 5395 5528 . - . ID=g11670.t1.exon1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 5395 5528 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 5055 5094 . - . ID=g11670.t1.exon2;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 5055 5094 . - 1 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 4685 4804 . - . ID=g11670.t1.exon3;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 4685 4804 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 4237 4351 . - . ID=g11670.t1.exon4;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 4237 4351 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 3891 4015 . - . ID=g11670.t1.exon5;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 3891 4015 . - 2 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 3477 3614 . - . ID=g11670.t1.exon6;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 3477 3614 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 2976 3167 . - . ID=g11670.t1.exon7;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 2976 3167 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 2533 2641 . - . ID=g11670.t1.exon8;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 2533 2641 . - 0 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . exon 2067 2411 . - . ID=g11670.t1.exon9;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . CDS 2215 2411 . - 2 ID=cds.g11670.t1;Parent=g11670.t1 NODE_913_length_15931_cov_38.7429 . three_prime_UTR 2067 2214 . - . ID=g11670.t1.utr3p1;Parent=g11670.t1 #PROT g11670.t1 g11670 MALRGLRVIEMAGLAPAPFAGMMLADFGANVVRIDKAKDRFSMDRLSRGKRSVAVDLKRPEGVAVVRTLCKTADVVIEPFRPGVMEKMGLGPEVLCVDNPRLVYARLTGYGQSGPYAKLAGHDINYIAAAGVLSLFGRQGERPIPPGNVVADFAGGSMMCVAGIAFALVERSISGKGQVIDAAMVDGANYLTHFVHRARDMGIWSGEKGTNLLDTGAPFYDTYETKDGKYVSVGALEPQFYSLFIRGLGLSEAEARDAPGQMDKDGWPALRTLFTRKFKERTLADWTKVYEGSDACVMPVVDHATAATDPHMRARRLVVDNPDGGVDAAPAPVLSRTPAADIAAEGRMALPQIGEHTAQVLKEALYSEEAIRGMFQSGIVSGNAPQSRL* # PASA_UPDATE: g11669.t1, single gene model update, valid-1, status:[pasa:asmbl_9970,status:12], valid-1 NODE_913_length_15931_cov_38.7429 . gene 260 670 . + . ID=g11669;Name=g11669.t1 NODE_913_length_15931_cov_38.7429 . mRNA 260 670 . + . ID=g11669.t1;Parent=g11669;Name=g11669.t1 NODE_913_length_15931_cov_38.7429 . exon 260 670 . + . ID=g11669.t1.exon1;Parent=g11669.t1 NODE_913_length_15931_cov_38.7429 . CDS 260 397 . + 0 ID=cds.g11669.t1;Parent=g11669.t1;5_prime_partial=true NODE_913_length_15931_cov_38.7429 . three_prime_UTR 398 670 . + . ID=g11669.t1.utr3p1;Parent=g11669.t1 #PROT g11669.t1 g11669 DLVGFNLAALRFIKRDIEANTDVDFFGESNEAPIEQVKKKVKVFH* # ORIGINAL: g11671.t1 original gene structure, not modified by PASA NODE_913_length_15931_cov_38.7429 AUGUSTUS gene 6306 8260 . - . ID=g11671;Name=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS mRNA 6306 8260 . - . ID=g11671.t1;Parent=g11671;Name=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 8143 8260 . - . ID=g11671.t1.exon1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 8143 8260 . - 0 ID=cds.g11671.t1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 7758 7924 . - . ID=g11671.t1.exon2;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 7758 7924 . - 2 ID=cds.g11671.t1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 7402 7495 . - . ID=g11671.t1.exon3;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 7402 7495 . - 0 ID=cds.g11671.t1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 6825 7201 . - . ID=g11671.t1.exon4;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 6825 7201 . - 2 ID=cds.g11671.t1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 6594 6632 . - . ID=g11671.t1.exon5;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 6594 6632 . - 0 ID=cds.g11671.t1;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 6306 6416 . - . ID=g11671.t1.exon6;Parent=g11671.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 6306 6416 . - 0 ID=cds.g11671.t1;Parent=g11671.t1 #PROT g11671.t1 g11671 MAGTLSSAHLEQYLDSVESLPHDLQRNFTLLRELDSRSQEIIKGIEGRAQGLLKQLRAMPLDQRTKAMRQLQQDFQKCLEYGDDKVHLAAQTYDMVDKHIRRLDDDLAKEEAVSRDEEPVPEERPRKKHRTADSDATPVANDRSTNANAQNNNSNNSSNNGSSASRDRRESREAPRSDKKAGAAVAASAAAPVSVKRERSAGNLNTSADRRSLTTTAVAVAAPKSSGKGRGMDIEMDMPVDPNEPTYCICHQVSYGEMIGCDNNDCPTEWFHFQCVGLASKPKGKWFCPRCADAKKREARR* # ORIGINAL: g11673.t1 original gene structure, not modified by PASA NODE_913_length_15931_cov_38.7429 AUGUSTUS gene 14558 15763 . + . ID=g11673;Name=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS mRNA 14558 15763 . + . ID=g11673.t1;Parent=g11673;Name=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 14558 14809 . + . ID=g11673.t1.exon1;Parent=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 14558 14809 . + 0 ID=cds.g11673.t1;Parent=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 14980 15141 . + . ID=g11673.t1.exon2;Parent=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 14980 15141 . + 0 ID=cds.g11673.t1;Parent=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS exon 15290 15763 . + . ID=g11673.t1.exon3;Parent=g11673.t1 NODE_913_length_15931_cov_38.7429 AUGUSTUS CDS 15290 15763 . + 0 ID=cds.g11673.t1;Parent=g11673.t1 #PROT g11673.t1 g11673 MATSVHGAHSHACIECNVAFDTAEKLARHKAKFCVGSAYDPTALEANARARGVGEGSSPSSTQRSLLPQNLNLETVSKSGMAKMNLLEVKQHFSANVSDLERLEREASKRSESEKIRKLHELKAKKEVLRQKREEEEQGLMSTLKELQAHKETELRLALEREQAKKQLKGLGRQQLAQLEDERRREIESLERERDAAIRREGEATKEFNRVAERVAGKTHAAGGNGGNGGGDGRSNDRAMYVRKGAGNAAVFEKVQRLAEEHGRVFAGLTEQTHRLEDQRFAIIRRLNEINPMGDE # ORIGINAL: g2908.t1 original gene structure, not modified by PASA NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS gene 2 642 . + . ID=g2908;Name=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS mRNA 2 642 . + . ID=g2908.t1;Parent=g2908;Name=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS exon 2 51 . + . ID=g2908.t1.exon1;Parent=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS CDS 2 51 . + 0 ID=cds.g2908.t1;Parent=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS exon 326 368 . + . ID=g2908.t1.exon2;Parent=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS CDS 326 368 . + 1 ID=cds.g2908.t1;Parent=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS exon 540 642 . + . ID=g2908.t1.exon3;Parent=g2908.t1 NODE_5795_length_714_cov_44.1205_potentialcontaminant AUGUSTUS CDS 540 642 . + 0 ID=cds.g2908.t1;Parent=g2908.t1 #PROT g2908.t1 g2908 TADLSEEAVSKKVSEASLTKTNVLESTAGRQERQFTANPSHQSSPHLVQNKSSPAAKPTTVQSSQ # ORIGINAL: g13156.t1 original gene structure, not modified by PASA NODE_942_length_15675_cov_42.2488 AUGUSTUS gene 18 1025 . - . ID=g13156;Name=g13156.t1 NODE_942_length_15675_cov_42.2488 AUGUSTUS mRNA 18 1025 . - . ID=g13156.t1;Parent=g13156;Name=g13156.t1 NODE_942_length_15675_cov_42.2488 AUGUSTUS exon 18 1025 . - . ID=g13156.t1.exon1;Parent=g13156.t1 NODE_942_length_15675_cov_42.2488 AUGUSTUS CDS 18 1025 . - 0 ID=cds.g13156.t1;Parent=g13156.t1 #PROT g13156.t1 g13156 MHTPPAACVSTLLCRTRVTQLEYRGRTIHIKRDDELTFGGGGNKPRKLYTLLARDPSSLPPCVVSWGGINSNAMYAVAHFASLRKMRFTYCAAGRNLPVFDSADASPPGCLRESLRFGMQVLPFSNLADARLKAEYLAKDGGHLVVPQGGHFADAEAGVALLARELADDARTLFPEHTHVTVVVPSGRGTTAFFLAKHLLIIQGESTRNISFSVRGVACASTAASVCADASSLIAPGEQFPRNLGFWETPLSRHFGRLSPFLFEKQAELARLGLTVDYLYGANAFVALDHQQKHIHTEGDPDAAGAAHSRVVYVHTGGLVGNINMQLRYAAAGFR* # PASA_UPDATE: g13158.t1, single gene model update, valid-1, status:[pasa:asmbl_10059,status:12], valid-1 NODE_942_length_15675_cov_42.2488 . gene 12032 15625 . - . ID=g13158;Name=g13158.t1 NODE_942_length_15675_cov_42.2488 . mRNA 12032 15625 . - . ID=g13158.t1;Parent=g13158;Name=g13158.t1 NODE_942_length_15675_cov_42.2488 . five_prime_UTR 15600 15625 . - . ID=g13158.t1.utr5p1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 15504 15625 . - . ID=g13158.t1.exon1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 15504 15599 . - 0 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 15135 15252 . - . ID=g13158.t1.exon2;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 15135 15252 . - 0 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 14535 14698 . - . ID=g13158.t1.exon3;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 14535 14698 . - 2 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 14142 14305 . - . ID=g13158.t1.exon4;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 14142 14305 . - 0 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 13704 13903 . - . ID=g13158.t1.exon5;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 13704 13903 . - 1 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 13300 13418 . - . ID=g13158.t1.exon6;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 13300 13418 . - 2 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 13122 13188 . - . ID=g13158.t1.exon7;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 13122 13188 . - 0 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 12475 12919 . - . ID=g13158.t1.exon8;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 12475 12919 . - 2 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . exon 12032 12346 . - . ID=g13158.t1.exon9;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . CDS 12268 12346 . - 1 ID=cds.g13158.t1;Parent=g13158.t1 NODE_942_length_15675_cov_42.2488 . three_prime_UTR 12032 12267 . - . ID=g13158.t1.utr3p1;Parent=g13158.t1 #PROT g13158.t1 g13158 MISDGYGPAAQTLARTFVSGGIVQPHDEKTAMDSYLVGTSRSRSSSSFITDSAAGATAFSCGIKSHNRGIGVDANDSPCGTILEAAKAAGYGTGVVVTSYLADATPASYAAHVADRSSKGTIAKQMMTLGIDVMMGGGLGYFVPKEDPRSLRTDSTDLLGVARNASYSVITDADQLQQLSSLPVLGLFSREYMDLVIDRNHLGNDATSPSPRQPSLWEMVDASLRLLTTATARSEKGFFLLVEGSQIDIAGHMNDAAALARETVEYNDMFSHVIRYADGRGDTLIVSTSDHETGGLTLGYQYNDGGIPHNYEWDVEPLRRANRSTYAVAMELFTAARASILTETFVREHCLSGLLGISDATAAEVSTIVQLATTESVELSSPSTVQFSRLAFQLGRLVNSRCGIGFTTQGHTAVDVNIYAHGPSSSKFVGNWDNTDVGLHMWDIMQLDRTATTASIKRKFGDNVTRRSGSDATENRDLFHDAL* # PASA_UPDATE: g13157.t1, single gene model update, valid-1, status:[pasa:asmbl_10060,status:12],[pasa:asmbl_10061,status:12],[pasa:asmbl_10062,status:12], valid-1 NODE_942_length_15675_cov_42.2488 . gene 1568 11511 . - . ID=g13157;Name=g13157.t1 NODE_942_length_15675_cov_42.2488 . mRNA 1568 11511 . - . ID=g13157.t1;Parent=g13157;Name=g13157.t1 NODE_942_length_15675_cov_42.2488 . exon 11377 11511 . - . ID=g13157.t1.exon1;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . CDS 11377 11511 . - 0 ID=cds.g13157.t1;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . exon 10828 11106 . - . ID=g13157.t1.exon2;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . CDS 10828 11106 . - 0 ID=cds.g13157.t1;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . exon 10502 10624 . - . ID=g13157.t1.exon3;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . CDS 10502 10624 . - 0 ID=cds.g13157.t1;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . exon 9838 10302 . - . ID=g13157.t1.exon4;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . CDS 9838 10302 . - 0 ID=cds.g13157.t1;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . exon 1568 9478 . - . ID=g13157.t1.exon5;Parent=g13157.t1 NODE_942_length_15675_cov_42.2488 . CDS 1568 9478 . - 0 ID=cds.g13157.t1;Parent=g13157.t1 #PROT g13157.t1 g13157 MSWINNDWKDGLSGQAQTKVREMEHAIESCQSVIKQKDVKMSNLEFIALTECNHHSTNILRRPSELKEEKQERSNMQRELREAGDLARSLDAANKKAASDIKHKEEFIASINGQLKKAKEAMETATARANALQRDFEQARASADASHRAHENEMRQAKQSIDQLEKLVKQEKEASARVMAEKRDSEARFSRESEELNRRIRNAEASSAREVEAFRLRASAAETKLERTSEELDRIRNELSRMRSDAAREIEALAGKCGGADAFAAELKVKAENAIRDCERRMTETTVCVQEERDGHAAAVTDLSAALAASEAGRVAAEQSAEQLRSLLAEAQRQAQHAPAPVRDIFETVPAVFQQQQQQQQQQHHQTTTGSSTTPASDLINMDEVVAPAKSSVAASGLLDGPSPDLEAATRALAETEAAARDLRFRLSSAEAVVAETRANAERATAELTAQLATAYARAESAEASRNVCDHDAAEARAKLSLATAAADALRARLGDMEFKTASAAASVSEMQSRLDVALAEVQTLSHSLERAELAARTAIDASESLKARLEPELVRTRDELCRATVDLAGAKTEADVLRLEAKSMAEQLLLLTGASDHNNAERDALAAKVRTLEVEVQSAAMRMEQLQFDFDDCAEREMDLVARLDRATEAHARAETEVARLSLLLSKAEEAGVALGQKVSKLELDAVMLRGQLDDATNAAENYSAVARTRDGTITELQAKLSALGVDAEARDSGLSSQVADLREKLAKALKDVDSAQQVIATRDAAIAQLRTTLEDANTAESRASRELDSLKEEIATRIAQIECATTEASRMQACLSVTCAEKDALSAAVATANAALMRAEERISALTTEVDSLTSAVSSMRMTITERDNALSTVCAELDSVRKSSDAQNSSICNDLVFMRERAEKAESDAVAALASKEALHATLSQKMVAMEALVASAEARADQDAQALKSKIELMEMDMEDATAAAESAGVELSNLKAERDALAGKLAEATKSVAAKELQLERNAEEMSSAATRLATLERAHAEQSAMFASAQQLLASTKADADSRIAEISRDAENERTRSNALSVELDNAKDVHTITVTKLGAAEDALATARGTVSALEAQLNSLTLETNNLRRLVDAATEEKNAATALVDSLTLKVASGDALIADMKRSLADVTTSFSVERETTTKSIALQLDDALAKVAAVTIERDGLVSRVANAEVNSARREAEAESAREDADTLEEMHTTLQAKLDETVAALATAKTDVANAKDQLNQQKTALEEANARVRDAESLLAVSRAQWETESTATSEIKSALTAEIEKLRSECDRLRASVSAAESRIEVVSSTQAEAIASRDALLAEMDAIRAHAEQLDAMNARLASDAESLDATLKKERHDTAKYAEELSAALRAHEADAEAVRSRASSAANDVARIEAEKESVRKALAALESKLETAHATILLKDADISALSAKVNVLSAERTALESAVTSLRADVANKESVVVRLETEMSNATEASKHLEKRFSEDCDSLTSQLSLAEADVQELKCRLDAADDAALSASSDLATARGQLAETQSNLEASERSAAVACEKISSLSAQLKTLESEKTSLLQAAAESADRMLTLTAAADESKAAALCAASRVDELTAAVNALKTSLDASASDLDNKRSALDAARARTAELEKKVTMVEMELSLVASTHAESIRGLEAECRRLEEERDAAKKAADSLADTLRAAKVQCNDVQRQNQSLANAVDGDQLASQSSLEKIEELIAEIELKKCAISDLQEALSSKETEAVALRQALTDMEDSLIASRDSVAVSAKAALSGAGCADALLKAQAAENARTAVELERTRAQLDDAQGQIAGLRVDVDKYKEDVRHLQGAAEMARHAATESERKVEDAKRETKRALAELDDAASALETAKCAAAEYATEKEKLTVAYQNANEAVTALQRQLISEKAYYKEEASTASKGWASLVDDVARLEAKLKTAEEEVSRLNCELAVSKKAADALDAELEMLRETGAVGGQSLADEFAVGSLAQLEDEKMALIARISGMESEGSVLKDAAYSARMALEAERARCLALELELGALKEANLLSSPGVSRDDMNPRKRRRSGLESGSPTGDVDVSSVVGEIGRALAAAEDKMSELECEIARLTSALSGERALRATAEESAERQKAALVERMDQFAGVRADLEASIAVERLRAADAEVDRDYKAHECSEAACELEKARKEVEAKVAEHDTLSAQCAAMKSQVEQLLTDGAANEDAIFDLQQRIADADTALLRAEKERDEARLHAEERTQMLSEAKLDLAAKETELQSARDAAVNLELRLAKAEAALDASRADVVRLDAALATAMARSESTCISAQAEIERLECDLEFARTELKAEAAKAARLADVAREHDDVVVTMRAAIADAEAMLSKAREENSVSSEALFVARSQLTETSSRFDAMKERIRFLESSLADAKAEATEASLALEKALESSTAELRSLSTKLVVSEKEIATLRAQVDDLEVQRNRLVESVTTLGASSAQGQTERERMLASELEELKGALAEAERARAGDLADAEETMNKYRETLARLKQLERTNAKLITQSLPSSQPATGISAGYDAVMGAVGMSSTLASSVAATPMSQQQQQQQQSAIQAPVLASSLPRLTRAAKRRSDEFAAYEGAGTPSDSSASKRARLDNNSYSATASPARSVFASHVTKQGQHSTMTTPSKGSASYGSSTLTTPRRATTPSKGPTAAAPALAPAATVTIPVYTHGHAMHQQQQQQQQQQQHQQQQTHAATAPPQRVAFDLHAVKPMSKLLTARAMAAIDSAIKTTPKKAAATQSLHSVPAAVPQPFSAAYTSAPALPTSHVATSQAYAPAQPQPQYAAADAGDKRSLRSALRTTNGTQSPLAPASANFIAPRSAAAFAASKSASSNVTATAALSSDTAMGAEDKENGAGVGANNGRARRQGLRARFDTTVNVIEHNATVPSKVALPPPPPAGTAVDKEQECNVQ* # PASA_UPDATE: g7867.t1, single gene model update, valid-1, status:[pasa:asmbl_1934,status:12], valid-1 NODE_154_length_34312_cov_43.0195 . gene 3475 4793 . - . ID=g7867;Name=g7867.t1 NODE_154_length_34312_cov_43.0195 . mRNA 3475 4793 . - . ID=g7867.t1;Parent=g7867;Name=g7867.t1 NODE_154_length_34312_cov_43.0195 . five_prime_UTR 4703 4793 . - . ID=g7867.t1.utr5p1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . exon 4508 4793 . - . ID=g7867.t1.exon1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . CDS 4508 4702 . - 0 ID=cds.g7867.t1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . exon 4254 4393 . - . ID=g7867.t1.exon2;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . CDS 4254 4393 . - 0 ID=cds.g7867.t1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . exon 3935 4138 . - . ID=g7867.t1.exon3;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . CDS 3935 4138 . - 1 ID=cds.g7867.t1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . exon 3475 3721 . - . ID=g7867.t1.exon4;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . CDS 3502 3721 . - 1 ID=cds.g7867.t1;Parent=g7867.t1 NODE_154_length_34312_cov_43.0195 . three_prime_UTR 3475 3501 . - . ID=g7867.t1.utr3p1;Parent=g7867.t1 #PROT g7867.t1 g7867 MALLSPFARDASRRLITSHVPATARTTAIAAELGIPHPLRAKRSLLCAPRGKFGGQRSWLATLPRTPALRGIQGYMWPALQAPIANRSIFMWVENIFNAVDHSRIRAVGAERACAEFVFRMEGRVRVVGAKDFITSTPQLPSGNIAIEAIEFDDATVTPRGMEYFRGLESIRFLRLSNCRYVMDEGLLPVSGLTTLEELDLTATRITDKALEYILPLRNLKQLKIPQCDKIANKEAFVGAIVKAIPGCEVFA* # PASA_UPDATE: g7869.t1, single gene model update, valid-1, status:[pasa:asmbl_1935,status:3], valid-1 NODE_154_length_34312_cov_43.0195 . gene 9627 16596 . + . ID=g7869;Name=g7869.t1 NODE_154_length_34312_cov_43.0195 . mRNA 9627 16596 . + . ID=g7869.t1;Parent=g7869;Name=g7869.t1 NODE_154_length_34312_cov_43.0195 . five_prime_UTR 9627 9645 . + . ID=g7869.t1.utr5p1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . five_prime_UTR 9779 9819 . + . ID=g7869.t1.utr5p2;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . five_prime_UTR 10170 10249 . + . ID=g7869.t1.utr5p3;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 9627 9645 . + . ID=g7869.t1.exon1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 9779 9819 . + . ID=g7869.t1.exon2;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 10170 10327 . + . ID=g7869.t1.exon3;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 10250 10327 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 10650 10723 . + . ID=g7869.t1.exon4;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 10650 10723 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 10949 11164 . + . ID=g7869.t1.exon5;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 10949 11164 . + 1 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 11342 11467 . + . ID=g7869.t1.exon6;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 11342 11467 . + 1 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 11663 11949 . + . ID=g7869.t1.exon7;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 11663 11949 . + 1 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 12144 12314 . + . ID=g7869.t1.exon8;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 12144 12314 . + 2 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 12525 12709 . + . ID=g7869.t1.exon9;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 12525 12709 . + 2 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 12895 12995 . + . ID=g7869.t1.exon10;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 12895 12995 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 13160 13259 . + . ID=g7869.t1.exon11;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 13160 13259 . + 1 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 13449 13650 . + . ID=g7869.t1.exon12;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 13449 13650 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 13838 13944 . + . ID=g7869.t1.exon13;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 13838 13944 . + 2 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 14113 14250 . + . ID=g7869.t1.exon14;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 14113 14250 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 14469 14569 . + . ID=g7869.t1.exon15;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 14469 14569 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 14731 14866 . + . ID=g7869.t1.exon16;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 14731 14866 . + 1 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 15094 15346 . + . ID=g7869.t1.exon17;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 15094 15346 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 15472 15668 . + . ID=g7869.t1.exon18;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 15472 15668 . + 2 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 15792 16200 . + . ID=g7869.t1.exon19;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 15792 16200 . + 0 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . exon 16324 16596 . + . ID=g7869.t1.exon20;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . CDS 16324 16493 . + 2 ID=cds.g7869.t1;Parent=g7869.t1 NODE_154_length_34312_cov_43.0195 . three_prime_UTR 16494 16596 . + . ID=g7869.t1.utr3p1;Parent=g7869.t1 #PROT g7869.t1 g7869 MALAERLASTSDYARPDFDTNTQMAEVEAMIRKAAMMPNETIQKEISWFYNNLGIESIFFKSETVEKISEFILSVYAAKILSYTKHKTTVDINLEHETDKGAIYLCNSQPGVSVSHGPLFEKKIDQKYLNRKSDAKDVYRVETYRSKGFIADDTPVQLRCYFVDRSEFDNPNADAMETNLQLIGSRNFLERASDHTKVVYQDIINKAVTRNGPVIQYFFFPEQEEARMVVAYRRGDTVNFFSSVSDLYHFYDLFSTRKFVEQFSNGLVVVSTYLKQLPESKSLPLETAIHQLAKEVSLLYALPSSPLQPLFYEKKLSMQAISYSYCAWKFAEHFLNRLGPEYEALQKALDVNKEEHSALLMTLKTRLRLDTFTSEFIFEIVQRYPELVRLLYQNFASVHRVQNLGTSGNGKLQRNPSMASLDEEDLSHEAILKRIKSTVLNPKEYMVFECFLMFNKHILKTNFFQPTKVALSFRLDPRFLPKSEYQKEVFGMFFIVGAEFRGFHVRFADVARGGIRIVRSANREIYSRNSSSLFDENYNLALTQQRKNKDIPEGGSKGTILLDIVHQDKAEIAFKKYVDAILDLLLIGQSPGIKDTIVDLYKLPEILFFGPDEGTADYMDWASRHARFRNAGFWNAFTTGKSPEIGGIPHDLYGMTTRSVHQYVIGILSKVGIKEEDCTKMQTGGPDGDLGSNEIKISKDRTIGIVDGSGVIYDPNGLDREELRRLANGRKMVMYFDVAKLGPGGFRVLIEDRDVTLPDGTIIENGTNFRNTFHLHPLARATLFVPCGGRPEAVNLTNVHSLFDEKGEPKFKYIVEGANLFFTQDARLLLEKAGVVVFKDASANKGGVTSSSMEVFAALALNDDEFEKHLCAKNGVIPQFRERYVRETQEFIERNAALEFECLWRAHEKSGVARSVLSDRLSNKIVQLSNDLEQSALWDNAQLRNLVLSEYCPPSLLDLLGLDTLIKRVPESYLRAIFGCFLASRFVYSFGLDYSPFAFFEFMNAYSQKATASKAN* # PASA_UPDATE: g7870.t1, single gene model update, valid-1, status:[pasa:asmbl_1936,status:12], valid-1 NODE_154_length_34312_cov_43.0195 . gene 17832 21473 . + . ID=g7870;Name=g7870.t1 NODE_154_length_34312_cov_43.0195 . mRNA 17832 21473 . + . ID=g7870.t1;Parent=g7870;Name=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 17832 17846 . + . ID=g7870.t1.exon1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 17832 17846 . + 0 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 17988 18143 . + . ID=g7870.t1.exon2;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 17988 18143 . + 0 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 18572 19234 . + . ID=g7870.t1.exon3;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 18572 19234 . + 0 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 19717 20681 . + . ID=g7870.t1.exon4;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 19717 20681 . + 0 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 20866 20988 . + . ID=g7870.t1.exon5;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 20866 20988 . + 1 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . exon 21191 21473 . + . ID=g7870.t1.exon6;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . CDS 21191 21365 . + 1 ID=cds.g7870.t1;Parent=g7870.t1 NODE_154_length_34312_cov_43.0195 . three_prime_UTR 21366 21473 . + . ID=g7870.t1.utr3p1;Parent=g7870.t1 #PROT g7870.t1 g7870 MAGKEASVRWDFTASKPEEVSVRVGEVVVVIDDKAKWWKVENEAHQIGFVPSNYLKMRPTVRLSDPSASTSHSGPPSPMPLSPGKADPSQPVRKLSNDATHYGVVTEQQTSNRRSIEQAPPSHHSHAQHHQHSVMSAPMIAVRSPSIAGGAMEEAARTAENNNSNSGNNSNSNGPTSGGSGGSGATLGRSFSGPGNPNRRSMLDDMGHSFDEDMGAEDCSILVRCAWDFVALTSDELSLRKGDIVTVLQKDGGEWWLGMVSGREGWFPWKFVEDVVDQRQSVEVIGQARAVHDFHSDYRSEVSFLRGETMEIFGRVNDDWLEVRVAEDAGRVGIVPCNYVQIVSGPGAGAPAPQSPNHRRKLTNESGTVRSVSPQRPSAPSLASIVPSLPRGNSSAGEDDDTSHNRHASIKYAQLSYGPPSSSQSAIRGEPASAEDATSYTTVTRQQLQNNPHPLQYAQQVHGGSQSDESSRMYPSLQGMGGGPAATSTAGTQRRESNSEQGQLWTFPARRPSLSHGGAFTNENPPPVMPRRQSEDAGAGTLVRKTSASSSQRPVSMADPTMLQRTLDPMCDHPRPASYNGTPLPAYENFTAMDALAAKPWFFGKISRPQSEQLLMDHGLHQEFLVRESETKPGDFTISLRVETAVKHFRIASGSGGSSFLIGTREFTNLEDLVHFYESNPICLTPAGRVMLGRPLRK* # PASA_UPDATE: g7866.t1, single gene model update, valid-1, status:[pasa:asmbl_1933,status:3], valid-1 NODE_154_length_34312_cov_43.0195 . gene 851 3076 . - . ID=g7866;Name=g7866.t1 NODE_154_length_34312_cov_43.0195 . mRNA 851 3076 . - . ID=g7866.t1;Parent=g7866;Name=g7866.t1 NODE_154_length_34312_cov_43.0195 . five_prime_UTR 3002 3076 . - . ID=g7866.t1.utr5p1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 2835 3076 . - . ID=g7866.t1.exon1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 2835 3001 . - 0 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 2381 2548 . - . ID=g7866.t1.exon2;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 2381 2548 . - 1 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 2154 2227 . - . ID=g7866.t1.exon3;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 2154 2227 . - 1 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 1807 1910 . - . ID=g7866.t1.exon4;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 1807 1910 . - 2 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 1214 1314 . - . ID=g7866.t1.exon5;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 1214 1314 . - 0 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . exon 851 1015 . - . ID=g7866.t1.exon6;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . CDS 898 1015 . - 1 ID=cds.g7866.t1;Parent=g7866.t1 NODE_154_length_34312_cov_43.0195 . three_prime_UTR 851 897 . - . ID=g7866.t1.utr3p1;Parent=g7866.t1 #PROT g7866.t1 g7866 MGTRNALRGPPVPATQSALAVAGAFGIDTVCPLCKSDTYLNPNVKLLISITCGHKLCDALCINRMFNDIRSTAVCPYPNCGERLRRDMFTVQTFDDLDIEREVNVRKRVSKGLPKSENDFPSLRDFNDYLEDMEDIVYNLTYKVDVYATNIRLDKLRIRLKELQAQRKAQEHAVDVSGLAYQHRPTTEETHGPAVPSIDELILKGYTREMHDLVDTRTLAGGFVPAYICLRALEDAYSCLFLE* # ORIGINAL: g7871.t1 original gene structure, not modified by PASA NODE_154_length_34312_cov_43.0195 AUGUSTUS gene 22014 30471 . - . ID=g7871;Name=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS mRNA 22014 30471 . - . ID=g7871.t1;Parent=g7871;Name=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 30194 30471 . - . ID=g7871.t1.exon1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 30194 30471 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 29932 30028 . - . ID=g7871.t1.exon2;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 29932 30028 . - 1 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 29450 29740 . - . ID=g7871.t1.exon3;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 29450 29740 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 29079 29159 . - . ID=g7871.t1.exon4;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 29079 29159 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 28145 28825 . - . ID=g7871.t1.exon5;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 28145 28825 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 27824 27972 . - . ID=g7871.t1.exon6;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 27824 27972 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 27460 27552 . - . ID=g7871.t1.exon7;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 27460 27552 . - 1 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 27083 27295 . - . ID=g7871.t1.exon8;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 27083 27295 . - 1 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 26724 26859 . - . ID=g7871.t1.exon9;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 26724 26859 . - 1 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 26385 26494 . - . ID=g7871.t1.exon10;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 26385 26494 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 25861 26008 . - . ID=g7871.t1.exon11;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 25861 26008 . - 1 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 25429 25686 . - . ID=g7871.t1.exon12;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 25429 25686 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 24687 25193 . - . ID=g7871.t1.exon13;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 24687 25193 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 24216 24431 . - . ID=g7871.t1.exon14;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 24216 24431 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 23542 24024 . - . ID=g7871.t1.exon15;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 23542 24024 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 22783 23397 . - . ID=g7871.t1.exon16;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 22783 23397 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 22561 22644 . - . ID=g7871.t1.exon17;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 22561 22644 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 22014 22292 . - . ID=g7871.t1.exon18;Parent=g7871.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 22014 22292 . - 0 ID=cds.g7871.t1;Parent=g7871.t1 #PROT g7871.t1 g7871 MPSFASASISNDGASLSPVAAFADVLRWARSADASREDSAASSDDDDVSDGARGVHPTSLAGSHVGSDQSSACDDDWTLCTDATEDPLARTLRSGKVFPVVRAYFNNGGWKRRRRQSVRRLTTRLKRTDEPNRGDPSDDDDADRPTGSATAERELPLPQALRETYIAALQCALFPALAGEIGGGDSEGLVEFLRDAFGMSNQAHMECVKELRGRRDSAKDAELLAQDLVVQMMHLENNSHPVYSMQAFPTKNTYDLWRHQEQAKIHALIGKFWAFTLPQPAPPSTHAAVDRHAQLESLIAKLLDRCARTADGRRTGRRSSAVAGIANSVTAIPPAGESPLPSVASELVGALADVHGTSPRAPNGLLMGVRRGSASPVRVGSPVSPGPATGFARASIASFPVFSGPVTDHDRCVRILAEFSLRHGVGDMQRHLARLFHLARRFENTLPHLRWTIAALRDSLSLLPQSQSRVTMTTKEHNMFRQAVLLLHAQVRNSLTRIKRIFPNNAPRGGVSSLIELLGLLTQADRYVGGGKSQASYNLDYVLSRYLKESFSTTYQRILTISLDCTRGCEASPVQANERRKQSTASTSSRLHDLARCPYTAAQLSLVVEEINSELEYYRKYYQIEFDGHFDLVALAGAEYYAMVCADVHQLCASQGRLIENERIARQSAPAGSEAHPFRQIDATDLDHDLLHLAMALHKLDSQWMPLFPDGSMTSWREDFVPIALQWVDSLSDRLALWIDRACEKDTVRADNVVDVLFDWSPLMDSVTGADCANSSSVIDVVYALAEALRFVRSLDFLLDGSPLSASSTPSRKFGRHLESELDGAAASASIPSVPLSIFCDRFLSVVHDAIRQYGNALLRLDTEGLPGDAVAQLALLRCIPNAACDCHTSTCQSGCVNVDKAPSSCACSPRTPGGPGCERFVIGAEPPVGMEPGASGAASGMPSTATLVGAGKPCAQRNRSLCDVICSLSGGDACASSKARKMAGQSSKATKAVHDTHLAVHGRKLRVQPVTVDACVRMNNIELLLGMFDEIASECMRHNGSVVAVATASANDHKGSFVGGDPRLADAKHYLCHVRACQVDIIKHKAVVFLRPAIEAVFESRLALMPPQRRTEPVLSWLASQFAELSVRLSPTPLRLAIAAVWNGVVGVFEDVILGPLIAGTPETAATPPSSGSPSASAPQSPMPAGRPVSSVASILLSPETQQTTTTTQRDVSANSSVAASIVSPRKRRTKELTPEQTSLMEHVIALFIVFFHADGTGMTLEYLHVSIDSLVRIIELHSLSTSTLIQLCDELLAVEYPPVSSSGTTSAAPSNFSSISDIASSSASGMVNDTVSVATQNTASDSGIGTITSRRSIVSDVTVAAYRKRSTDRSAFVMESGTGVGGISGGMAGGLPGTADSANVEADLVAYGESLYKLLHAEASGPLVRDHRNILCTHRQTVSGAEVVSWMLSKGWTKTRASATDICSGLLRVNVIAAVTGDLLRFQDDTSLYRFTADDEKGRRRLRPQGVRSWIASNSDMSGGKPVSVDDIVAILGARRGDSAAKRAAVNVADLVRQQPAVGAQGALQQQQRS* # ORIGINAL: g7868.t1 original gene structure, not modified by PASA NODE_154_length_34312_cov_43.0195 AUGUSTUS gene 5216 8900 . + . ID=g7868;Name=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS mRNA 5216 8900 . + . ID=g7868.t1;Parent=g7868;Name=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 5216 5385 . + . ID=g7868.t1.exon1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 5216 5385 . + 0 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 5534 5841 . + . ID=g7868.t1.exon2;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 5534 5841 . + 1 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 6081 6434 . + . ID=g7868.t1.exon3;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 6081 6434 . + 2 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 6581 7406 . + . ID=g7868.t1.exon4;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 6581 7406 . + 2 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 7611 7707 . + . ID=g7868.t1.exon5;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 7611 7707 . + 1 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 7898 8071 . + . ID=g7868.t1.exon6;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 7898 8071 . + 0 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 8290 8520 . + . ID=g7868.t1.exon7;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 8290 8520 . + 0 ID=cds.g7868.t1;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 8697 8900 . + . ID=g7868.t1.exon8;Parent=g7868.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 8697 8900 . + 0 ID=cds.g7868.t1;Parent=g7868.t1 #PROT g7868.t1 g7868 MAAVGALNGDPEVTKRSQVVLTLLKYGILLLIAIVAFASRLFAVIRFESIIHEFDPWFNYRSTHHMVTHGFYEFINWFDERSWYPLGRIVGGTVYPGLMFTSGTIHWVLHALHIPIHIRDICVFLAPIFSGLTAIATFLLTSELSSTGAGLLAAAFIGIVPGYISRSVAGSYDNEGIAIFALMLTYYLWIVALKRGSMFFGALTALAYFYMVAAWGGYVFIINLIPLHAFVLLLMGRYSARLYLSYSTFYVLGTIMSMQVAFVGFQPVRTSEHMAAMGVFALLQAYSFVEYLRAHIERRSFEAIFKLTVITAAGIVFLAVVGLTYAGVIAPWTGRYYSLWDTGYAKIHIPIIASVSEHQPTAWSSFMFDLHFLVVAFPAGLWLCTQNMNDERAFIVLYAATATYFAGVMVRLMLTLTPCVCILSAIAVSSILDTYLRQEPKADGVAVDEAGSSASGAVETKERARSARQRKLREDARPWIPADARIAVSALMIVLLTQFVVHSTWVTSNAYSSPSVVLASYNPDGSKAILDDFREAYYWLRTNTPDDARIMSWWDYGYQIAGMANRTVLVDNNTWNNSHIAMVGKAMSSNESAAYTIMRGLDVDYVLVIFGGYIGYSGDDINKFLWMVRIAAGEHPKDIREAEYYSSDGQFRVDSGAPKTFVNSLMYRLCYYRFGDIQLSHRDPPGFDRTRNVEIADKNIRLTHLDEAFTSEHWLVRIYKVKDLPNEDSLGHDARVTETKAKRKAKRGKGSRGYIHNKLVFKRVGKTAAGSATATGTPPSTNTDSQE* # ORIGINAL: g7872.t1 original gene structure, not modified by PASA NODE_154_length_34312_cov_43.0195 AUGUSTUS gene 32025 34063 . + . ID=g7872;Name=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS mRNA 32025 34063 . + . ID=g7872.t1;Parent=g7872;Name=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 32025 32321 . + . ID=g7872.t1.exon1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 32025 32321 . + 0 ID=cds.g7872.t1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 32691 32767 . + . ID=g7872.t1.exon2;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 32691 32767 . + 0 ID=cds.g7872.t1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 32900 32966 . + . ID=g7872.t1.exon3;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 32900 32966 . + 1 ID=cds.g7872.t1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 33202 33366 . + . ID=g7872.t1.exon4;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 33202 33366 . + 0 ID=cds.g7872.t1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 33514 33608 . + . ID=g7872.t1.exon5;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 33514 33608 . + 0 ID=cds.g7872.t1;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS exon 33802 34063 . + . ID=g7872.t1.exon6;Parent=g7872.t1 NODE_154_length_34312_cov_43.0195 AUGUSTUS CDS 33802 34063 . + 1 ID=cds.g7872.t1;Parent=g7872.t1 #PROT g7872.t1 g7872 MTKRKHLIEDEDKEGEEEMGTSKGGLAAELVELFGTKDLYEILSVSRESDGAALKKAYRVKALRCHPDKVAEEEKADATRKFQALAKVYRILGDQETRNAYNETGVIDDEDASGIEAPADGNWEEYFRLVLKRVDTKAIIEFEKKYRHSEEERQDVRAAYKTARGDMSLILDTVMCSTVDDEERFRTIIQDGIDSGELKRYKKFSLDDASSRQQRMERAEEEAAEAEKERKRLGLDDDNALAALIRNRGAERLKSLEDSLLGKYGESSRGKKKGKSGTTKTDAAPNGDGTSNKKKRVHVEPSEEEFAAIQARLDAARRKK* # ORIGINAL: g1176.t1 original gene structure, not modified by PASA NODE_18271_length_189_cov_40.9298 AUGUSTUS gene 1 176 . - . ID=g1176;Name=g1176.t1 NODE_18271_length_189_cov_40.9298 AUGUSTUS mRNA 1 176 . - . ID=g1176.t1;Parent=g1176;Name=g1176.t1 NODE_18271_length_189_cov_40.9298 AUGUSTUS exon 1 176 . - . ID=g1176.t1.exon1;Parent=g1176.t1 NODE_18271_length_189_cov_40.9298 AUGUSTUS CDS 1 176 . - 0 ID=cds.g1176.t1;Parent=g1176.t1 #PROT g1176.t1 g1176 MSQEVNFSKVKITNSLNNEGHIMLNSFQKYEPRFHIVSLDPVTHQPLSVETRVFPDTE # PASA_UPDATE: g14117.t1, single gene model update, valid-1, status:[pasa:asmbl_4989,status:3], valid-1 # PASA_UPDATE: g14117.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4991,status:3], valid-1 NODE_277_length_28411_cov_40.9637 . gene 11327 12678 . - . ID=g14117;Name=g14117.t1 NODE_277_length_28411_cov_40.9637 . mRNA 11327 12678 . - . ID=g14117.t1;Parent=g14117;Name=g14117.t1 NODE_277_length_28411_cov_40.9637 . five_prime_UTR 12636 12678 . - . ID=g14117.t1.utr5p1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . exon 12475 12678 . - . ID=g14117.t1.exon1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . CDS 12475 12635 . - 0 ID=cds.g14117.t1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . exon 12163 12337 . - . ID=g14117.t1.exon2;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . CDS 12163 12337 . - 1 ID=cds.g14117.t1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . exon 12033 12068 . - . ID=g14117.t1.exon3;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . CDS 12033 12068 . - 0 ID=cds.g14117.t1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . exon 11719 11838 . - . ID=g14117.t1.exon4;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . CDS 11719 11838 . - 0 ID=cds.g14117.t1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . exon 11327 11510 . - . ID=g14117.t1.exon5;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . CDS 11397 11510 . - 0 ID=cds.g14117.t1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . three_prime_UTR 11327 11396 . - . ID=g14117.t1.utr3p1;Parent=g14117.t1 NODE_277_length_28411_cov_40.9637 . mRNA 11327 12678 . - . ID=g14117.t1.1.5b6be70b;Parent=g14117;Name=g14117.t1 NODE_277_length_28411_cov_40.9637 . five_prime_UTR 12636 12678 . - . ID=g14117.t1.1.5b6be70b.utr5p1;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . exon 12475 12678 . - . ID=g14117.t1.1.5b6be70b.exon1;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . CDS 12475 12635 . - 0 ID=cds.g14117.t1.1.5b6be70b;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . exon 12163 12337 . - . ID=g14117.t1.1.5b6be70b.exon2;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . CDS 12163 12337 . - 1 ID=cds.g14117.t1.1.5b6be70b;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . exon 11719 12068 . - . ID=g14117.t1.1.5b6be70b.exon3;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . CDS 11973 12068 . - 0 ID=cds.g14117.t1.1.5b6be70b;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . exon 11327 11510 . - . ID=g14117.t1.1.5b6be70b.exon4;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . three_prime_UTR 11719 11972 . - . ID=g14117.t1.1.5b6be70b.utr3p1;Parent=g14117.t1.1.5b6be70b NODE_277_length_28411_cov_40.9637 . three_prime_UTR 11327 11510 . - . ID=g14117.t1.1.5b6be70b.utr3p2;Parent=g14117.t1.1.5b6be70b #PROT g14117.t1 g14117 MIVRVVIAALAVASFAALSHAHDTPGTSYFTSHSFVKPLDPESTHFDDPDIKEWHFHTYWYQTQKASRDAALSLRHKLLQEVTSGKLKVVFNGITNEVFPSLNVSNVPLFNEGPIGPHPIGSFETWVPKEFVAQALSFFMLNRGDLTILVHPLTRHEIEDHTHRAMWLGNVQSIDLTALTPDLGAPPAQYPELGLGYSSAN* #PROT g14117.t1.1.5b6be70b g14117 MIVRVVIAALAVASFAALSHAHDTPGTSYFTSHSFVKPLDPESTHFDDPDIKEWHFHTYWYQTQKASRDAALSLRHKLLQEVTSGKLKVVFNGITNEVFPSLNVSNVPLFNEGPIGPHPIGSFEVCCISLLSVLLLHSVVWRE* # PASA_UPDATE: g14114.t1, single gene model update, valid-1, status:[pasa:asmbl_4988,status:3], valid-1 NODE_277_length_28411_cov_40.9637 . gene 5483 8971 . - . ID=g14114;Name=g14114.t1 NODE_277_length_28411_cov_40.9637 . mRNA 5483 8971 . - . ID=g14114.t1;Parent=g14114;Name=g14114.t1 NODE_277_length_28411_cov_40.9637 . five_prime_UTR 8873 8971 . - . ID=g14114.t1.utr5p1;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . exon 8321 8971 . - . ID=g14114.t1.exon1;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . CDS 8321 8872 . - 0 ID=cds.g14114.t1;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . exon 6324 7931 . - . ID=g14114.t1.exon2;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . CDS 6324 7931 . - 0 ID=cds.g14114.t1;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . exon 5483 6069 . - . ID=g14114.t1.exon3;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . CDS 5581 6069 . - 0 ID=cds.g14114.t1;Parent=g14114.t1 NODE_277_length_28411_cov_40.9637 . three_prime_UTR 5483 5580 . - . ID=g14114.t1.utr3p1;Parent=g14114.t1 #PROT g14114.t1 g14114 MTFEKRTPPPPPHARRSVGGGRDLSALASASYWLTVAALMLGVFENASYYQQRLPSPLPDDAPAMQFSESRSLDTLQHLVLGIKARHASTDAYNKETIAYLRDRLFAVQSSADPSLMIEIEVHRSSYAFRYHESPGVATVLAGTTTLIARISRRDNDTSRENALLISGHCDSVPRGPAAFDASQGCANNIEVLRALSQSPSLAWSNAVIFAFVAEEHGVSAHYVITGHAWARTIRGFFNQEGAGSGGRAILYRFGAGSGWLGHMYAAAPHPAGSPLRHAVASLNPQTTDYDVYVQYGHSDADGDKAHPLSGVDTVYFDRRYWYHTGYDTLPIGSGIPVTVGSLQQNGENALSIARTFIERYSAHLAVTSDDSVTYYEMGPFFLLHDLTRARTASMVVIVANAAAALAGLLIALCRGGAVSFLKASARGVACVFGSVIAGTCLSALLAYGMHATNGFVFYGHVGLAFTMYCAWGVAGAVAVHAWFAREGASGTPLGAVPAFWATQAFWAVVLALITAIIPRLFYLGLYFASVPALCSALLVANGDDDGPQRRTLSRGLIGGGKGTPVASSALWEVFTLVVAIAALVVPLLVWVGDFRGLIITGASEFNRTPFGVPAPEVVFACLCAVGAIGALSFPLALAHRYCGWRVPLAAAVSIAVVATLAMHGETPYVPTDAPMRTWTQHECALDKSSCNITVVPITNNVYALSSLVADPDIKLGTWRRKATWGYATQFERPASIPDIAFPSHSFAYDASRGVASLTVVLPRDIAAVQYQFGVENATVKSFSVSVNGGDPSAPFSSDELGLFVQTGYRSGPDAECAVRVDISVDGWAATGAAPSRLRVSGVAKSPLSTADLDSLEAALPEWAMAGLDLFPISVNVDLAFP* # ORIGINAL: g14122.t1 original gene structure, not modified by PASA NODE_277_length_28411_cov_40.9637 AUGUSTUS gene 27270 28280 . + . ID=g14122;Name=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS mRNA 27270 28280 . + . ID=g14122.t1;Parent=g14122;Name=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 27270 27452 . + . ID=g14122.t1.exon1;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 27270 27452 . + 0 ID=cds.g14122.t1;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 27524 27685 . + . ID=g14122.t1.exon2;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 27524 27685 . + 0 ID=cds.g14122.t1;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 27859 27938 . + . ID=g14122.t1.exon3;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 27859 27938 . + 0 ID=cds.g14122.t1;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 28106 28280 . + . ID=g14122.t1.exon4;Parent=g14122.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 28106 28280 . + 1 ID=cds.g14122.t1;Parent=g14122.t1 #PROT g14122.t1 g14122 MEIKSLIRGVFAAFVCLSVCNAFASARVGTFEAPCHGTRLHPPPETQSRIVKDDTPLRVFVPASVWTFQVPHSHLDVGWVYPLNEVYESYVKDIYSSAVAAMLASPKRKFIAVEQFFFSRWWNEDATPKEKDAVKRYVTESRWEFVIGGWVMHDEATTDHLAMADQLMRGHQFVLDVFGVRPKHGWQVSEYSLSWNEER* # ORIGINAL: g14118.t1 original gene structure, not modified by PASA NODE_277_length_28411_cov_40.9637 AUGUSTUS gene 13875 15234 . + . ID=g14118;Name=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS mRNA 13875 15234 . + . ID=g14118.t1;Parent=g14118;Name=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 13875 13994 . + . ID=g14118.t1.exon1;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 13875 13994 . + 0 ID=cds.g14118.t1;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 14201 14264 . + . ID=g14118.t1.exon2;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 14201 14264 . + 0 ID=cds.g14118.t1;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 14478 14593 . + . ID=g14118.t1.exon3;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 14478 14593 . + 2 ID=cds.g14118.t1;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 14737 15234 . + . ID=g14118.t1.exon4;Parent=g14118.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 14737 15234 . + 0 ID=cds.g14118.t1;Parent=g14118.t1 #PROT g14118.t1 g14118 MDDLVAAEIRRIVATEDFYGILGITTAECTPDSVRRQYLRISRRIHPDKNKDDELATKAFQKLSVAYETLRNPTSRAAYDLKGTPVSANSDDVFAEVIKQVYRDFFDGEFEIILQIVDQINRQNPDLKIDRSVVRETLLSLRKAINEVSKITSDVCGDLLHFAELYGEFKALRYRDVLGRARVGIQLAQVLLRIPINARLPLPKVATGAIKFATNQLDLALASVTKVSSWWDKGASLLWSASWSGAWSRGATAAPPPPPSRGVVA* # PASA_UPDATE: g14113.t1, single gene model update, valid-1, status:[pasa:asmbl_4987,status:3], valid-1 NODE_277_length_28411_cov_40.9637 . gene 1558 4315 . - . ID=g14113;Name=g14113.t1 NODE_277_length_28411_cov_40.9637 . mRNA 1558 4315 . - . ID=g14113.t1;Parent=g14113;Name=g14113.t1 NODE_277_length_28411_cov_40.9637 . five_prime_UTR 4096 4315 . - . ID=g14113.t1.utr5p1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . exon 3519 4315 . - . ID=g14113.t1.exon1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . CDS 3519 4095 . - 0 ID=cds.g14113.t1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . exon 3048 3226 . - . ID=g14113.t1.exon2;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . CDS 3048 3226 . - 2 ID=cds.g14113.t1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . exon 2584 2826 . - . ID=g14113.t1.exon3;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . CDS 2584 2826 . - 0 ID=cds.g14113.t1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . exon 1558 2420 . - . ID=g14113.t1.exon4;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . CDS 1710 2420 . - 0 ID=cds.g14113.t1;Parent=g14113.t1 NODE_277_length_28411_cov_40.9637 . three_prime_UTR 1558 1709 . - . ID=g14113.t1.utr3p1;Parent=g14113.t1 #PROT g14113.t1 g14113 MSLRGGRAGVDLSDGGHQRSRPYSDESFIDEANQQRPVVHIDGREDFQRPTPVNRSKDLVSGGENGSSSSTGSISPPLDASSMDDGTSSTSDENSNGNESPPLAFESNDSGVGSNAGMSADAKGTQSDASSQAASLVDYGGRSNRRKRNRLSPTSVVSEALGIDSKDRSSPIPEFECGLCLQLLCEPVTIPCGHTFCRNCLVSALERSKKKCPECRAPCHVSAENHPTSYLITSLLQRLYPQLYMDRLGEAESERASWKLKLPLFMMGTVLFPGQPLGLHLFEPRYKLMVKRVLEANRCFGYLPSNPTPGAVGVVSEITECEFLSDGRALITAIGRKRFRILETWIEPGTQDLHYAKFEYVEDDDMPTEAEWPHLHSHPGAWVRPPAFDALFAEANRLVRIYIQLLSFEESRAESGEIPDNPVAFSFWVTSVIPIQNRLKMELLRMTSTVDRLLVLVQQLRLLVRRAGMAESQMQNIQERIRQDFVLGDNNINNNVNGGAGVGAADMNMNGALHGRSFASGGVIVVEGRGAGLDIRHESGVEREEGMDMGVGADDAINVDRMEFDDGAQ* # PASA_UPDATE: g14120.t1, single gene model update, valid-1, status:[pasa:asmbl_4986,status:12],[pasa:asmbl_4993,status:13], valid-1 NODE_277_length_28411_cov_40.9637 . gene 22317 24136 . + . ID=g14120;Name=g14120.t1 NODE_277_length_28411_cov_40.9637 . mRNA 22317 24136 . + . ID=g14120.t1;Parent=g14120;Name=g14120.t1 NODE_277_length_28411_cov_40.9637 . five_prime_UTR 22317 22408 . + . ID=g14120.t1.utr5p1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 22317 22472 . + . ID=g14120.t1.exon1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 22409 22472 . + 0 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 22587 22667 . + . ID=g14120.t1.exon2;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 22587 22667 . + 2 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 22825 22949 . + . ID=g14120.t1.exon3;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 22825 22949 . + 2 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 23161 23291 . + . ID=g14120.t1.exon4;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 23161 23291 . + 0 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 23508 23610 . + . ID=g14120.t1.exon5;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 23508 23610 . + 1 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . exon 23768 24136 . + . ID=g14120.t1.exon6;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . CDS 23768 23872 . + 0 ID=cds.g14120.t1;Parent=g14120.t1 NODE_277_length_28411_cov_40.9637 . three_prime_UTR 23873 24136 . + . ID=g14120.t1.utr3p1;Parent=g14120.t1 #PROT g14120.t1 g14120 MSLAQWFQALQGAQKTCMVADGRKKIHFTFLDKSEMVEEYDAKTDDLVVRKWRAKSALGGEGTWTYEVGEEVKRPSALAGEQALVESNLNPVFARKDSKVQFQWRVRNLPYPIDNYSVSVDADRHLTIRTANKKFYKRFNIPDLDRCAIPLDARAVTFAHANNTLIVSYAKPQPFLEFEAVMRAERTKLVPKKEGDVECNPQ* # ORIGINAL: g14115.t1 original gene structure, not modified by PASA NODE_277_length_28411_cov_40.9637 AUGUSTUS gene 9855 10058 . - . ID=g14115;Name=g14115.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS mRNA 9855 10058 . - . ID=g14115.t1;Parent=g14115;Name=g14115.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 9855 10058 . - . ID=g14115.t1.exon1;Parent=g14115.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 9855 10058 . - 0 ID=cds.g14115.t1;Parent=g14115.t1 #PROT g14115.t1 g14115 MEGPAGKAEHPGMFYTIHNLPGKAKGKQADLTAFYEVPASFGSDGPHAWFARECLRACQLHATDLAK* # ORIGINAL: g14116.t1 original gene structure, not modified by PASA NODE_277_length_28411_cov_40.9637 AUGUSTUS gene 10103 10923 . - . ID=g14116;Name=g14116.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS mRNA 10103 10923 . - . ID=g14116.t1;Parent=g14116;Name=g14116.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 10498 10923 . - . ID=g14116.t1.exon1;Parent=g14116.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 10498 10923 . - 0 ID=cds.g14116.t1;Parent=g14116.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 10103 10369 . - . ID=g14116.t1.exon2;Parent=g14116.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 10103 10369 . - 0 ID=cds.g14116.t1;Parent=g14116.t1 #PROT g14116.t1 g14116 MSPDGAVARDLLARVGRLAAANPAMAKRLVELKKAKVRPSPGWLVGGASSPGSLDGAGADVDEKGEIILTTHMKRLLANAVTVAISSCVSTTAQLARAGLLSAAPTCIHGAGILHGTREGHPAAGQPRYPSVSSRRFANSVCMDTWDKHSNLCGLLVTWLHRLYSAPPSLEYTVHDVYMRFVDSCVTLFVARRDYPTVISGMDMVRSKGGFHMMNMDKLCFDSRIQFGEF* # PASA_UPDATE: g14121.t1, single gene model update, valid-1, status:[pasa:asmbl_4994,status:12], valid-1 NODE_277_length_28411_cov_40.9637 . gene 24141 26199 . - . ID=g14121;Name=g14121.t1 NODE_277_length_28411_cov_40.9637 . mRNA 24141 26199 . - . ID=g14121.t1;Parent=g14121;Name=g14121.t1 NODE_277_length_28411_cov_40.9637 . exon 26034 26199 . - . ID=g14121.t1.exon1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . CDS 26034 26199 . - 0 ID=cds.g14121.t1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . exon 25612 25859 . - . ID=g14121.t1.exon2;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . CDS 25612 25859 . - 2 ID=cds.g14121.t1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . exon 25318 25438 . - . ID=g14121.t1.exon3;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . CDS 25318 25438 . - 0 ID=cds.g14121.t1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . exon 24810 25032 . - . ID=g14121.t1.exon4;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . CDS 24810 25032 . - 2 ID=cds.g14121.t1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . exon 24141 24648 . - . ID=g14121.t1.exon5;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . CDS 24177 24648 . - 1 ID=cds.g14121.t1;Parent=g14121.t1 NODE_277_length_28411_cov_40.9637 . three_prime_UTR 24141 24176 . - . ID=g14121.t1.utr3p1;Parent=g14121.t1 #PROT g14121.t1 g14121 MEGIENAADVGMPTATTLSVQPDAKRQRLNSGGKPVEVERDRRSSGGYVRAIPKKGGAGGKGVWGKPGDEMRGAVSSVDRDDPNYDPDTEPYDLEEITTGDDVDKALREGIAEYFVTGLAREVGELISDLNTDFAAAKAVALTVAMAMERKDSERELASNLIADLAANRFVAVNDIEKAFDELLDAVEDARLDTPDASTLLGRFLARAVADDCIPPSFLAVRLASAAGTLSAIAMEALRSADVMLSMKHGLVRLDTIWGAGGGRRPVRQLKKRIIMLIREYIDSDDIAEAERCVRELEVPHFHHEIVFEAFSLALESGGDGNFPAIVRLLRSLADSVLITPEQMKMGIDRVIAQIDDICLDVPNAHKLLAGFAKVSVDAGIFPASVLASLPQRGRKRFISEGDGGRIKE* # ORIGINAL: g14119.t1 original gene structure, not modified by PASA NODE_277_length_28411_cov_40.9637 AUGUSTUS gene 15627 21822 . - . ID=g14119;Name=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS mRNA 15627 21822 . - . ID=g14119.t1;Parent=g14119;Name=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 21424 21822 . - . ID=g14119.t1.exon1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 21424 21822 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 21143 21268 . - . ID=g14119.t1.exon2;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 21143 21268 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 20556 20942 . - . ID=g14119.t1.exon3;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 20556 20942 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 20287 20357 . - . ID=g14119.t1.exon4;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 20287 20357 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 19855 20055 . - . ID=g14119.t1.exon5;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 19855 20055 . - 1 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 19617 19665 . - . ID=g14119.t1.exon6;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 19617 19665 . - 1 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 19407 19457 . - . ID=g14119.t1.exon7;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 19407 19457 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 19043 19176 . - . ID=g14119.t1.exon8;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 19043 19176 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 18577 18763 . - . ID=g14119.t1.exon9;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 18577 18763 . - 1 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 18109 18293 . - . ID=g14119.t1.exon10;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 18109 18293 . - 0 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 16459 17808 . - . ID=g14119.t1.exon11;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 16459 17808 . - 1 ID=cds.g14119.t1;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS exon 15627 16230 . - . ID=g14119.t1.exon12;Parent=g14119.t1 NODE_277_length_28411_cov_40.9637 AUGUSTUS CDS 15627 16230 . - 1 ID=cds.g14119.t1;Parent=g14119.t1 #PROT g14119.t1 g14119 MAMKRNVSAGKLPVSIEEGDEADPFQSPPPSRPQRRPTGYTQGGSDGRPAVILHGGLGAAPDDAIHGGDPDADDAEESGEKSVGGRTRGPKIEYSSAGGDSMELSADQDAMQSSWPYPRSMSARPVKGRTGSQLKLSEDDSDEQLEGTFTSKLRTASRMFQGLELKIMSALQASQSDHNDVAMGVNGVSQDIGATRHPNLIISPASLDSPHEGVSAGVGAGAGAGPGGDHGGDMGKEPTVGAAVVPQTDMEEVDMEYGRVPKSGCLAFLFRRSKAVRDLYWDYFAKYSETGNSSTRFFFMFLYLADWMWVVSYVAEQWDIQGNESNDWYYVPRQQAYWGIKVALAYILVLESIFRLAFLGRSIARFYSFMVIAVLDVLTIWPYILSVYWVTLRTLYVPGFMRVWHSQMVLKVFVLGNSVRQRIDARTQIILVVHTLVCIVVTGACAFRFCYNTFHPRPEVPLTFLDALYFMVVTMSTVGYGDVTPDNQWSRIFVIGIIVCTLVIVPNSISRLATILRESSRFGGRYHTSPHKRHVVVCGRITYEVMTDVFVELYRRDVRRGDKRSIVVMLSTIEPSSELRALLLRPYLAKRTLFLQGSALLDRDLDRAQISKAAAVFLIADRSGDGVRGHIESAFGAGDDDGDIDVADVDKNNILRAWAIHLYAPEVPLYASILRPENRSHIERTFNCTHITCSEELKMDFLAASCIASGASTLVTNLLREQSAYYEAELASHTKLPWVEEYALGVTTNVRRLVAAGHIVGVAFADAAAAINLKFRATLIGLRARAPGASRGAIILNPGLSHTLRSGEELFICAASNRMVDDIREFIRSRECLLALSTSGEDSGGRIIENVAFVAPPSGQSVDASASAVTASPAPAGGRRSGSGGRGGSGGGGGGGRAGMMSWMERPLSDVANPHSLGLPGTPTHVDLPREPFPGARLFKCHVLPQGCATVLAAVTLKTAAHLRRHVILCSDALDGAYRFVARLRAATLPRSSLRPIVLVGPRPPSSISWEGIGQFPGVFYVRGSPTRAESLLRAGGRTADRIVIMSDPNSLATAGGEGTERALLDARAIMVAKMVRLLNDEREAPIPATTELLFPENMKFLAAAGVTNITKRRISHFFQPAYAAGHGWTSSLVDTVVYASLHEPYLNDVMHALVGPRTAADEDGAHATLVQLQLPEGAVGRTYGELFQEHARDDGIILLGLYRAASELLGNTLPYVFTNPPADVRINAGDLLFALSNISQQESSAC* # ORIGINAL: g13371.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 11017 11468 . - . ID=g13371;Name=g13371.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 11017 11468 . - . ID=g13371.t1;Parent=g13371;Name=g13371.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 11443 11468 . - . ID=g13371.t1.exon1;Parent=g13371.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 11443 11468 . - 0 ID=cds.g13371.t1;Parent=g13371.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 11017 11260 . - . ID=g13371.t1.exon2;Parent=g13371.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 11017 11260 . - 1 ID=cds.g13371.t1;Parent=g13371.t1 #PROT g13371.t1 g13371 MRGYVRVVRKVVHERIPRPPPDPSLINTTACGYEYMGVSTETPTVMSLRCPAGMVASSVLFASFGSPIGLCSMFVKDDACHDVKVVDAL* # ORIGINAL: g13373.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 17415 22114 . - . ID=g13373;Name=g13373.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 17415 22114 . - . ID=g13373.t1;Parent=g13373;Name=g13373.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 21428 22114 . - . ID=g13373.t1.exon1;Parent=g13373.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 21428 22114 . - 0 ID=cds.g13373.t1;Parent=g13373.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 17415 21266 . - . ID=g13373.t1.exon2;Parent=g13373.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 17415 21266 . - 0 ID=cds.g13373.t1;Parent=g13373.t1 #PROT g13373.t1 g13373 MKRGTDINVGTAVGRPHWQVLHHTPTPVRNDRLMRIAFDEPIGDAIATRMAPTVIAQMTSESFVLVMQIYSRTTMSALLYLVGKYSGLSNLERIIIVWNRSDVQPPTDRFTSASLVSVNIEVPTVHSINNRYRIPEYVTSRAVVVIDDAFILDPSDFATAFSAWRENPDRIVGFIIGSHDMHEDGFVYRSTSVNGSYSLVVIGALCLHVDFADLYWLDQYSKHREYVDMADGCDDILINMIATHATGKPPLHVRGHAGTLVTSTVLGMREGDLWYDKRSSCLNGLSNPPYFSSSPLRTTKYSLNLMAPASENAIPARHCCGADASVNEDCEEGGVIGALTANAEFSVTAVLTSFARPGNLRPIIAMLDARYEFIQEVIVINNDRDKPIDEVAGLESPIRTPLRVYNLEENMFTYAKYLGCVKGNHPVCYIQDDDYLPTNLRALYSAFTLRPQVMHAITDEGTYNHNMKWTFFDTEIGVHAGFAWLGTGSFVLRERVAQFMRKLDDIGIVGQGRQLADLYFSVWENEIPTTLISKLSTTGLDTQKAYSARGCSNCTNQRELNTNMRIHAVETLRARLAMPSDTTFNRDFVSHDFRSHAFKAACDNDECVLLTNVDIVPDLVARPTNFDDLHGHMAQGWIVPSTTVAFRRAVDGNDETAWTPGRAFQVGDFIGLDLLRKRVVSAIRVVASQFETGIFILEVSSSGVGGWRKKSFQVTSLHGGTTTGQTQALLIHLDEGAVEMRAFRLRKTNGPASTPTFHELSIVNRTQDNTLANLRILFVVTEVPPTNSSDVPTSAAVFVSRAVTLAAAGANVTIIIASTVDVRDVEFSSLRQRVRGAGASVLRLAVSPPEKSLKAHIMLAVSMLEWLQLQQPFQLVHFSSFESPMLFVLQARRVGLLFRNTLFVAHSMPTSAERRDSGVQFPSHAGYEMAFGLEKRSMLLAQAVIFPFTSVRKRVTLGDVGTDCAARLRLALPANAAIVLPFFFDSNGEEVDPPADSHERGNRPDSKGTRQVVPRPPPPASDAMMLFSELVVILDSHASATAIWIRILHDAIWSVRRLSPMPLRVKLFLLSGQAGEWLARLCTRFLDSVSRVPSVFASIGRNLSYSEVLTYVASAPHRFLCVLQTPSFGGGVVMDAVALQIPFIATVDYAEIVPASAREVLLFEAGQAQLARVVVGFLGRKVWDVPKTLVPQPAALLDAWIDYNSMLLRRANGPEIFRSEEATTITSNPSSTPTVSVYIFALQGGLSLKATVASVFATHYPASRLDAVIIIDGGDRTGMADFAAGLLGDRVMVVTSPAMDRIAAKKRIASAAKGDLVLFLSDNDVLRADALTVLVSAMQSTNADVVGGWMMEQMLRNSDPRRVDADRTRPMGDGLSAACVFTNCFVASGALHRRTALERADGWSLIEEMAHQMDDGDNYDLFVRETAAGMRLEFVPTVIYDHHKKSGVAERSFFLRSEDDHMPSLVDGMAISRVPPCGKRLQGLTTLIDANPELYDFLLLVCGSLDASRTRD* # ORIGINAL: g13377.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 31251 32886 . + . ID=g13377;Name=g13377.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 31251 32886 . + . ID=g13377.t1;Parent=g13377;Name=g13377.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 31251 32886 . + . ID=g13377.t1.exon1;Parent=g13377.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 31251 32886 . + 0 ID=cds.g13377.t1;Parent=g13377.t1 #PROT g13377.t1 g13377 MVFWRYIHYAFRSFFARCNALVAHLSFKRFGQIFASSIAIYCLLILLFPASEVQTQLHPPARCTCPNESSTGIDQSIRGATTTGQARPDGEHDSEPERSPRKLETKEELNPWLGLADTSAEFKAHVSVQRSLEGRRICFVTAGFSGPTSYGGIAQATFRQASLYVEHGAEVDVAYTSSFQTGDAKSWTAHFAKLKIVFLVIPKVDASAVYGSVHMKRAYDVWHWFKKRAALNLYDLIVFHDMRGLGLYVMYAKAAGLGFAKTALMVHAHGSSKLSDYFNARLPDEGDAGLVQYAMERKSVELADYVLSPSEYYYSWMLSNGYGLQEAAAAGTKLWTMSLLVPIEKWSVFNRAPRYGQLVRSSKFAFFGRIDRLKGLFTLLDALDELARTRDEQPKEVLFVGDSTTMYVDGQSVDAIAYIHKRHQAGSWPFSIKFSGSLTSEDVAELFVKGNYIFINPTNGETASTVTVELLNAGVAMITTNVCALPELFGQAGYREWQFDRGDVPALVELMRKAMRDGVPILRPRMRADESRNLYIDAAAVAIAL # PASA_UPDATE: g13369.t1, single gene model update, valid-1, status:[pasa:asmbl_2858,status:12], valid-1 NODE_186_length_32886_cov_43.6641 . gene 2 4189 . + . ID=g13369;Name=g13369.t1 NODE_186_length_32886_cov_43.6641 . mRNA 2 4189 . + . ID=g13369.t1;Parent=g13369;Name=g13369.t1 NODE_186_length_32886_cov_43.6641 . five_prime_UTR 2 3 . + . ID=g13369.t1.utr5p1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . exon 2 1440 . + . ID=g13369.t1.exon1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . CDS 4 1440 . + 0 ID=cds.g13369.t1;Parent=g13369.t1;5_prime_partial=true NODE_186_length_32886_cov_43.6641 . exon 1764 2372 . + . ID=g13369.t1.exon2;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . CDS 1764 2372 . + 0 ID=cds.g13369.t1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . exon 2884 3111 . + . ID=g13369.t1.exon3;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . CDS 2884 3111 . + 0 ID=cds.g13369.t1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . exon 3345 3474 . + . ID=g13369.t1.exon4;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . CDS 3345 3474 . + 0 ID=cds.g13369.t1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . exon 3649 4189 . + . ID=g13369.t1.exon5;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . CDS 3649 4013 . + 2 ID=cds.g13369.t1;Parent=g13369.t1 NODE_186_length_32886_cov_43.6641 . three_prime_UTR 4014 4189 . + . ID=g13369.t1.utr3p1;Parent=g13369.t1 #PROT g13369.t1 g13369 LPSGREWTVYERHHTADAHSSHCCTGASQPIADILESFASADTNYDDALEPAEVAALCASSALVPFTVPVSHPGGDVFHGSVSRGISVFLYENKRSRGTSNSSGKRDIPQHRRFVADIPGETDQEDLHGRNRRSLVGDATSDNSYPHIAVVTACVYGRCGWTLAPDGWYLENILAVSTVPYVAAPSAPGASQKELKVTAWPALVVVATNTAARIFRVHLGSAIQASSLPVHVEHYATIRASPSSRFNPFSVIVPPQSFHRGTMLFAYLKASTSYGDSAWIGRLRACAAGYGVAADGNCTECPPGQFKGEDSALGTCSPCAEGTYSPLPRSTTCLSCPFGLYSVEGASTCVECPPGSEVVRRADDVPNPWCVPCPRGSFRTAGMTHCAACTSTPAVVSSSGGGDTDATSCPAGSSVSTSLSATPSSSIGRYPDTSVDWTDDGTSPAIRVVYIGVFAAVFASMAVVVVLAVARPSNVTVTKICTAVDLYGADERFVREAVREGVCSAVPNAHVAEQERASLVIGLLMTSMFIAGALAIVAGTIAAAYDGSNDVLQHQPPQYPQGSDLYAAYSAAKLAADSRPFWAAVELHGWAGACDTSSVSAHFDGSTAAGVRSVTSLVAQQRESSTGGGGGASCVIHVTASAAPSAAAVAVGSSGASGVSVFDRLIVRLSARSPFAQSIGWELSYRVDGSPDVSRIRQVAVIPAQPPPQADVVVVCNGTVTVDDVVALYDRKGTILTGHVLTADSTGSHVDVCDPSQQATVGASESLTVQIVIRRSDVFTLAQLKQRLSAREMALACASAVGGLFSALRLAAGLARFVWNKLLSRSSLCVPRARRRPSATASLASVRTIGRTASQLQSRKPCNQSVASLCAPLLVDPADDPVRSPTIMPSTSRRSTAVDDYSSIASRLHCDMPAAECEASEP* # PASA_UPDATE: g13370.t1, single gene model update, valid-1, status:[pasa:asmbl_2857,status:12], valid-1 NODE_186_length_32886_cov_43.6641 . gene 4192 10198 . + . ID=g13370;Name=g13370.t1 NODE_186_length_32886_cov_43.6641 . mRNA 4192 10198 . + . ID=g13370.t1;Parent=g13370;Name=g13370.t1 NODE_186_length_32886_cov_43.6641 . five_prime_UTR 4192 4209 . + . ID=g13370.t1.utr5p1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 4192 4318 . + . ID=g13370.t1.exon1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 4210 4318 . + 0 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 4555 4675 . + . ID=g13370.t1.exon2;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 4555 4675 . + 2 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 4943 6075 . + . ID=g13370.t1.exon3;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 4943 6075 . + 1 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 6395 6471 . + . ID=g13370.t1.exon4;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 6395 6471 . + 2 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 6579 7892 . + . ID=g13370.t1.exon5;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 6579 7892 . + 0 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 8090 8686 . + . ID=g13370.t1.exon6;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 8090 8686 . + 0 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 9003 9254 . + . ID=g13370.t1.exon7;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 9003 9254 . + 0 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 9479 9608 . + . ID=g13370.t1.exon8;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 9479 9608 . + 0 ID=cds.g13370.t1;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . exon 9870 10198 . + . ID=g13370.t1.exon9;Parent=g13370.t1 NODE_186_length_32886_cov_43.6641 . CDS 9870 10198 . + 2 ID=cds.g13370.t1;Parent=g13370.t1 #PROT g13370.t1 g13370 MGVHSHRMALRPAFIVVVACVACVLGPMSGAGAVDIPTSRIPFIQIPFRTLIDEGAPPARGAPDTTMCSSSISKNCQYFVPLRSGRGDAAKQYPVSFHVLTTDDNGMLYAATSYLRLPRNITGDGLNQTCNRIAKLVAFRPMPSFENETSPVSGLKSLFALTLYNDTMQCRDAMHDFMEVDRFVSLRGNLLSLFACTPLSTCEVTLLSVRSVGAVPVGADVLWRVPVNTTQYRYTAYGEAVSADSAIILDATDDLAAGMPVSRQSLNFRLVRQLANGTMASASMALADETWAAVGDVSRGGAWLRPRMNLELVCAVDPLADTPERACTCTADIMAPGTPNGTIIALYAGDSLMLHNECVMSLIDWSLQDIGGDVIVQMPSLLPGQSYNHSFTLEDFVTSTIGDILLVTTFIRAGVTATSPVYLASYKRVTMYPNDLLFSFIAMKSNPDDPSLPQVTFGVAGELTRLHLSLKCKRDWSDLRGAIGLNANDTTPLTLTRAIVASMKKGPDAPPVSSTITTFAAADANGDDSVDLSEMARYCDSRGAFTSTVLRDHPGGDIFFADVSRGVAVILYKSKPTFSEAENSASSTRFFSIPDVAVVSVCAYTWCGWTNAPSGWDTELNDVLSVTVVPYVPTPPAQGPPPPAAEHAWPVLVVISTKLVAYVFKVEPANSVLAVSHHATVRAANSFSNPFLILAPPTVFRSTMLFASVDGGPKAADCAVLGRLRACGPGLGRLSNGTCSVCPPGYIKDGDDAFGVCTPCTPGRFSDSYGGTECVKCPEGTFSLSAAATCTPCAPGSESVLDDAGVPLPWCVPCGVGSYRNAEMTACAPCDDGSGRRRVAAPDALCPAGSSSPSASAVASSTRAMTYPDTSADWNAGSTSMSPALRAVYIVVFTTVLCVTAALIVVVAVRRTSITFLKIANAVDLFGAEERFVLDAVRDGVCVVHPNTCVARQERPSLLIGLTMTAIFLAGALAIVAGTIVSEYDGSNDMLYQQPPQYAQSGALYSQYADAKAVADRRPFAVSVWLHGWAGNCRIELVSAAFQVSSGGSLNAGLRNATITSAATVPTEDGSGVACKIRVLASVSPSVTSGSGGVLSVDHITIRLKARSVYAQSLEWEVDYAVDGTTDTSSIKHRALAPPRPESPTTSAGDDTPVRYVICNASFVADDVVSLYDRRGVVRSGHVITVDPVFSRVTGCDPSDQALNGGSDFISVDVTLRRSDHFMLAQLRWRLSAREMTVACISAVGGLFSGLKLVGALVRFAWKQLSACRCPTSRDRKLPRGVPSFTDNDKAIQFNTLHKPSCAHSIGGSRRSGSLSVTVNSVADVTQQLLPTGDTDATSAPGKSSDTTAHSHC* # ORIGINAL: g13376.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 29831 30583 . - . ID=g13376;Name=g13376.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 29831 30583 . - . ID=g13376.t1;Parent=g13376;Name=g13376.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 29831 30583 . - . ID=g13376.t1.exon1;Parent=g13376.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 29831 30583 . - 0 ID=cds.g13376.t1;Parent=g13376.t1 #PROT g13376.t1 g13376 MFASKRRFVVSRLQRLLRERWCALFFVVAICAGVVITLLDLPVNGADSQNSLLLNRTITNDDTFRHWRPSEGLLSFAAGEKFALVTEVSSRWHTVQDFVDKYSRLVNLERIIVVWNRPDIAAPLASSFESSVPVDVLEQTTYRVHNRYRLPDNLKSHAVLFVDDGLTIPHDDIHFAFSVWQENPDRIVGFLPHLLQTDSAENSRPQVKSGDDGFYSMLQIGASFFHSNYVRKYWSAEFVRHRDYVEKASH* # ORIGINAL: g13374.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 23384 25108 . + . ID=g13374;Name=g13374.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 23384 25108 . + . ID=g13374.t1;Parent=g13374;Name=g13374.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 23384 25108 . + . ID=g13374.t1.exon1;Parent=g13374.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 23384 25108 . + 0 ID=cds.g13374.t1;Parent=g13374.t1 #PROT g13374.t1 g13374 MRHDAGVSGISKHKRTSYLWWILLVSTVSFAGVGFCLRYTMSITTSKDSTATLSTATDQAPFFNKITIMQSSQKIAESHAISLFDATTHVHSRAHAHIRHDATEWAITPVDDFDLTALERCAIVVASVASLTTLPCRPQEISASLSSISAQSETRGRSAEAPASVRVTVVVHLANVSAGAVDGDGHILGALLVGTLRCRTCPSISESLSVQSYSYSYDHCDGFYSLSFIGLPPAVHAWDLSVRTFFVNYGHYVSTGYHCNRSLPGYIEAIPDHSEQNSCDMLDGNKRINEVVLVTEIRLGGYIAYEHSNRNRTMTEGGSGSSTEAHGHETSASTQPNLANGTRQAEDVKPSMDSEPPKDPICTNGFDDGRWLLRVPLGSTNSEASPIQYNLCRGETSNDHLRLWDHDNYLWCPYDCHLRLYTSADVDTCFDRNHWAGAVFIGDSRMRNLFLDLGTRLTGVTPPVIPQNDSFSGSGSSFFNLTKTNFRLREVWGYYPDISPAPPGCLYDAYSRDNGTERYLAARRARGHIGTIALAEVFRAGNGGRQSSAANEVVVITEGIHSMQVTRPSGLLGN* # ORIGINAL: g13375.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 25833 29660 . - . ID=g13375;Name=g13375.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 25833 29660 . - . ID=g13375.t1;Parent=g13375;Name=g13375.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 25833 29660 . - . ID=g13375.t1.exon1;Parent=g13375.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 25833 29660 . - 0 ID=cds.g13375.t1;Parent=g13375.t1 #PROT g13375.t1 g13375 MLVSASTGKPPLLVRGLVQSEMDLAMHDHSKDNNRHTKSDCINDLGRPPYFSEIPLKATRYAVSRYIEIDHKTVSVGAAPGRCGGLVGQSAQPGCSCGALSAALASTAPLSATAVVTCFGRSENVARIVSMLDDKYDFIQEIVVVNNDPARKLAPLLGILRPLRTVLRVMNLGENKFMYAKYIGCISSSHPVCYFQNDDVLPTSVSALYAAFVLRPDVLHVTTDERTYSLNNKRTFFDSNKQVHTGFATLENGAFVKRSRVDAFLNEMDAVGLDETARRLSDLRFAVWANEIPTTLIGALDQSGLHLDPTSTRCDSDVCAEHVHMMDTVRVAVMTLRAHILSVDSRSFNRAFVSRDFAAYHHKAICADDQCILLTSIDLVPSLVAHRQAEFTDAGLRSQLTDGPVVPWSSLAFRHAVDGNDATGWTPGRPPGPGDFVGLDLLRGRALMGLRIVALNFNPGDYILEVSCSPFNSWTKKAFLSARIIAPSAPPTAEGFYLTFQENSVGARAIRMRWKKEQDIAPVAPAIYDISGIFSERAEPLTGARLLFVLSELPDSVSKTPTHSSLIAARAEVLGRTGANVTVVIASTAKLHPDVTAQLRTRILSAGCTFAVVPRAPPKIKTGPPSKFVLLAASMLDWMLGEAAFDVVHYPTHAAPMALVLQARRVGLTFGSTLFVAHAVPTTMDRRVTAGRFPASVEDAVVTIMERRSVEYAQVVVLPFASARSELPIDIDARARNRRGNPAEVAVIPPVIFTRSAVGNRANPASLEETFAEAVVICDDATSEASLLVLSNAAASFQEAQTLQETPTPMTVTICVVSMESSTRLQSTILLLRRQSETSVTVRVMDSVVSYSAALRYVLGSPRRFLLVLNGPLAGGIVVLDAIREGIPLVAPAEFADIVPEASRTAFLYNNGWADLTRVLCAFLHRRVSDIPKLLVPRLDAALQEWIELNVILWQRRGSTEFLAPTPAKTRLPDDPTTPTITVCIPSHDRVAMLEAAVASVLESDYPASRLEIVVVDDATKTEEGKRSLEIVAALLKGRGVVAKSPGNGGIAARNHAARLARGELLYFFDDDDLLRPNTLTMLVNAMLSTGADVVGGWIEVFLNPVGAIDEGSKGGSFAGIHKDAVRRRWISMGGGLSACLFANCFFASGGLHRRSAFEKVGGWRAAPQGTAHQDYELYMREATNGFRLELMPCVVYDYRNHAPHTSPSTARLTSGAASSLGATGVLKSSVSLFRNRMHSLKPLLEAAPELQDALLVAYGNSNLQHSGNNNLTVT* # ORIGINAL: g13372.t1 original gene structure, not modified by PASA NODE_186_length_32886_cov_43.6641 AUGUSTUS gene 12408 15384 . + . ID=g13372;Name=g13372.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS mRNA 12408 15384 . + . ID=g13372.t1;Parent=g13372;Name=g13372.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 12408 12676 . + . ID=g13372.t1.exon1;Parent=g13372.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 12408 12676 . + 0 ID=cds.g13372.t1;Parent=g13372.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS exon 13401 15384 . + . ID=g13372.t1.exon2;Parent=g13372.t1 NODE_186_length_32886_cov_43.6641 AUGUSTUS CDS 13401 15384 . + 1 ID=cds.g13372.t1;Parent=g13372.t1 #PROT g13372.t1 g13372 MFTDTPGSTGSATESIPKAGRSVNDDKNASTDESAELETTQAHAAGSTTGADSLASDIGSTPKTLLQNTRDLQYLYVKRTSITDGTFRRRSFSSLEAEGRSAARWLRIYDGAAIASEDREDVTSSVASGEQVILILGSGGPIGRSLAADLRRRGHRVHTVDSKLDVDFSGAVESNTLPFQMFSDMRIRAAFLLAWDTRKPSDAMVEAVAKYFAQRSIPFVFPSTVHVLDPNSTFGDAKSSAESCVVAAGRSLAHVVRLPDAFGLERWHLGDSKQHFLGNILSKCVRSDMHVVASDFKPYTLSAYRQLIHADDIASALANAFENLGLSTAAPLLLPENRVMPLHVYSSEGDGWIRVGDIARQINRAWRVAGIGSTPHCVDDDVIGELDAIANASPLWGQRMNEGESAANHSSISVRVTLPLDLRLQDLFAAYEQHRTEHERSRVGSDGTPYISFLTGVRADDYGVGISARLQVAINHIAHYCDVYQISYEVIFIEWNPVNGTRFVDTVWFPKSMEGRVRIITVPASVAQSTGCQANMLDMWAKNVGMRRARGEYLLNFIPDSLWGENVFESIALRRIRADTVYLAYLLYTAHRLPEDVTKGGPESVLAWMVRDATDPTYTKAIRNYVQWGRNRQASGPLFRAAGDFTLSHRNAMETAIRGHWETCYVRHVDSMFAFQARRKGLRYAYMDGFIYHQYHVKMSHLYFAVPPLLKATADQTSKCAGIVAAQLETLVRNNGDWGYRNAVFTETTC* # PASA_UPDATE: g12835.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6053,status:12], valid-1 # PASA_UPDATE: g12835.t1, single gene model update, valid-1, status:[pasa:asmbl_6052,status:12], valid-1 NODE_3427_length_3496_cov_46.6235 . gene 1090 3194 . - . ID=g12835;Name=g12835.t1 NODE_3427_length_3496_cov_46.6235 . mRNA 1090 3194 . - . ID=g12835.t1.1.5b6be70b;Parent=g12835;Name=g12835.t1 NODE_3427_length_3496_cov_46.6235 . five_prime_UTR 3119 3194 . - . ID=g12835.t1.1.5b6be70b.utr5p1;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . exon 2881 3194 . - . ID=g12835.t1.1.5b6be70b.exon1;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . CDS 2881 3118 . - 0 ID=cds.g12835.t1.1.5b6be70b;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . exon 2356 2397 . - . ID=g12835.t1.1.5b6be70b.exon2;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . CDS 2356 2397 . - 2 ID=cds.g12835.t1.1.5b6be70b;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . exon 2201 2263 . - . ID=g12835.t1.1.5b6be70b.exon3;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . CDS 2201 2263 . - 2 ID=cds.g12835.t1.1.5b6be70b;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . exon 1457 2101 . - . ID=g12835.t1.1.5b6be70b.exon4;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . CDS 1457 2101 . - 2 ID=cds.g12835.t1.1.5b6be70b;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . exon 1090 1207 . - . ID=g12835.t1.1.5b6be70b.exon5;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . CDS 1155 1207 . - 2 ID=cds.g12835.t1.1.5b6be70b;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . three_prime_UTR 1090 1154 . - . ID=g12835.t1.1.5b6be70b.utr3p1;Parent=g12835.t1.1.5b6be70b NODE_3427_length_3496_cov_46.6235 . mRNA 1090 3194 . - . ID=g12835.t1;Parent=g12835;Name=g12835.t1 NODE_3427_length_3496_cov_46.6235 . five_prime_UTR 3119 3194 . - . ID=g12835.t1.utr5p1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . exon 2881 3194 . - . ID=g12835.t1.exon1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . CDS 2881 3118 . - 0 ID=cds.g12835.t1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . exon 2356 2397 . - . ID=g12835.t1.exon2;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . CDS 2356 2397 . - 2 ID=cds.g12835.t1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . exon 2201 2263 . - . ID=g12835.t1.exon3;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . CDS 2201 2263 . - 2 ID=cds.g12835.t1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . exon 1090 2101 . - . ID=g12835.t1.exon4;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . CDS 1155 2101 . - 2 ID=cds.g12835.t1;Parent=g12835.t1 NODE_3427_length_3496_cov_46.6235 . three_prime_UTR 1090 1154 . - . ID=g12835.t1.utr3p1;Parent=g12835.t1 #PROT g12835.t1.1.5b6be70b g12835 MAEQVDPIYANFTKVQKEIDAVTARIAKTERKTKELKKLRKDRELTAFQKEELARREKKLDVLRDEKVELLKQKSFAIQGAPLKRPRGEQKDEVLERFDRLESLLQSRLPPQKKSARLSQIDSVLERNLVQATALKRGVREFRLSAKDVARRRFSTIPAEFDWDERIESAQSDRYISFIRSQISNPNPDHIFRVNKCQQHIHDISAEWLPADLKGCADAVVIDRVAEESSLDVIRLCTRVAFEFKKVEVNQAANLRQGVAELVAAAAHSIYPVLHVLTDLATWFHFMWYELNAESERVLVVSETTDRGVAWLFINLFLEASTGSTGVNWDLFGPSHVRDTPEQMYS* #PROT g12835.t1 g12835 MAEQVDPIYANFTKVQKEIDAVTARIAKTERKTKELKKLRKDRELTAFQKEELARREKKLDVLRDEKVELLKQKSFAIQGAPLKRPRGEQKDEVLERFDRLESLLQSRLPPQKKSARLSQIDSVLERNLVQATALKRGVREFRLSAKDVARRRFSTIPAEFDWDERIESAQSDRYISFIRSQISNPNPDHIFRVNKCQQHIHDISAEWLPADLKGCADAVVIDRVAEESSLDVIRLCTRVAFEFKKVEVNQAANLRQGVAELVAAAAHSIYPVLHVLTDLATWFHFMWYELNAESERVLVVSETTDRGVAWLFINLFLEASTGSTGVNWGEIFLNSASCVPVVMNGPVTRVNVAAATGLPPVGSSIARLPLPPSSDDVGNVDDLLDCMSAEDVHDTFMLTLYTEIRRSHFFADLFGPSHVRDTPEQMYS* # PASA_UPDATE: g12441.t1, single gene model update, valid-1, status:[pasa:asmbl_6855,status:12],[pasa:asmbl_6856,status:12], valid-1 NODE_4011_length_2352_cov_175.693 . gene 2 2352 . + . ID=g12441;Name=g12441.t1 NODE_4011_length_2352_cov_175.693 . mRNA 2 2352 . + . ID=g12441.t1;Parent=g12441;Name=g12441.t1 NODE_4011_length_2352_cov_175.693 . five_prime_UTR 2 2 . + . ID=g12441.t1.utr5p1;Parent=g12441.t1 NODE_4011_length_2352_cov_175.693 . exon 2 2352 . + . ID=g12441.t1.exon1;Parent=g12441.t1 NODE_4011_length_2352_cov_175.693 . CDS 3 2352 . + 0 ID=cds.g12441.t1;Parent=g12441.t1;5_prime_partial=true;3_prime_partial=true #PROT g12441.t1 g12441 IVDVLRVINITVRDTGRLVSVARSVLVNITAVNDSPVLAQSTFTIPTIHEDLADDLNAGQSVWTLLGTAVTDVDAIPVKGIAVYAMDNTNGEWAYTLDNVTWTAIPSVSTAGALLLSGETNLTRVRFEPTLNFWSTATFSFVAWDQTSGSEGSTADITGKADITDAFSTATATTTITVTSVNDRPFISAGTYILTAVDEDVASADNTGVDGATLVAGLISDDDFDAVEGFAIIAADQTNGRWQFSVNSGTSWTAVPLSVSLESAAVLRAVSTVRVRFAPSANYHGDAEFVFVAWDNTDGLTSGHTNKDAQSLSAASAFSTGNHSAVITVNSINDQPVLQTTAVTLTAVNEDEGTQTTYSVVSLVAAAGVVDADSDAVFGIAIIGESLGSSLGVWEYTRDGSTWAMVSHSVAPATALLLAADSDSAIRFNTASDEHGSVSITFVSWDQTSGGAAGATVNSAAADATSPFSSASSEASLTINAVNDSPVVVTGVVTLTNVTEDDTVADVAGDSLTTLLAGVATDVDGTTAFGVAVTAADNAHGQWQYRLTGASSWTNVASVSAASALLVPSTGSLRFIPSADFDGDAALVALVWDETAGTAGQRADVRVDDHRDAFSTGTVTFGVDVVPVNDAPVVLVAAAARSLDFVQGTDAISVVNHATYDLYDIDSASLASMTVTLGGRSDVDGGFDDDVLVYDDQGLTVTITGAGTASMQVVFSDTASVAIYRAVLASMNYSNTNPLPKPGARTVTVTVNDGALDSSASTATFTVTVSNLNAPVLVVTGSA # ORIGINAL: g2709.t1 original gene structure, not modified by PASA NODE_20170_length_151_cov_19.6842_potentialcontaminant AUGUSTUS gene 2 151 . + . ID=g2709;Name=g2709.t1 NODE_20170_length_151_cov_19.6842_potentialcontaminant AUGUSTUS mRNA 2 151 . + . ID=g2709.t1;Parent=g2709;Name=g2709.t1 NODE_20170_length_151_cov_19.6842_potentialcontaminant AUGUSTUS exon 2 151 . + . ID=g2709.t1.exon1;Parent=g2709.t1 NODE_20170_length_151_cov_19.6842_potentialcontaminant AUGUSTUS CDS 2 151 . + 0 ID=cds.g2709.t1;Parent=g2709.t1 #PROT g2709.t1 g2709 ETVAVNFHDETGEVFGQFKLHAGDDAGAVRWMAASSELNLYASHRDLVRK # ORIGINAL: g11676.t1 original gene structure, not modified by PASA NODE_3268_length_3871_cov_40.8193 AUGUSTUS gene 3550 3783 . - . ID=g11676;Name=g11676.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS mRNA 3550 3783 . - . ID=g11676.t1;Parent=g11676;Name=g11676.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS exon 3550 3783 . - . ID=g11676.t1.exon1;Parent=g11676.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS CDS 3550 3783 . - 0 ID=cds.g11676.t1;Parent=g11676.t1 #PROT g11676.t1 g11676 MTPLGVLVWEMFTFGDMPWNEYTKDEMIRQIDSGRRLACPPNCPAVLYDIMNMCWLQDPSNRPEFWRLYELLNDLRI* # ORIGINAL: g11675.t1 original gene structure, not modified by PASA NODE_3268_length_3871_cov_40.8193 AUGUSTUS gene 764 3112 . + . ID=g11675;Name=g11675.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS mRNA 764 3112 . + . ID=g11675.t1;Parent=g11675;Name=g11675.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS exon 764 1848 . + . ID=g11675.t1.exon1;Parent=g11675.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS CDS 764 1848 . + 0 ID=cds.g11675.t1;Parent=g11675.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS exon 2146 3112 . + . ID=g11675.t1.exon2;Parent=g11675.t1 NODE_3268_length_3871_cov_40.8193 AUGUSTUS CDS 2146 3112 . + 1 ID=cds.g11675.t1;Parent=g11675.t1 #PROT g11675.t1 g11675 MTTTHGTRGRCIWWLFVLIAAVGAGFFMSTFWKVVSEQRADFRAARALGLQEVDIDGATWFIRRHRLAGTLPYGFDGNASAGAVGDLVVSAGRGRFLRYKRGCIVDGKLFVLGYANATATGRILNEGFKARAGQFELERERAGATDIWVTTALYLGPLLRDVASVDQSTFFGTPSSKIDAPTNTTATVAASTSAPNDTDSTVNALGESAANSTRPMSFNTPVRIQSEADNVYLSRLRRHMSLRYSHASDAHNCPECKEELAGLRKLMRRLREDFPNGTVSAEAEAGERANTLGALDRRLFPSDSASGGLCGNVLRIQRDSPTYLVFAWHAGNYLHAHEALYSLLTAKLSEMGHRGQLRTKGRLLHVNRHLLATRTLFEASDTVVFVDSLSDDARMQHLMPFFEHFIRPARIVHVTKDDMSKHPLCVETGYMVSRVPLNFARARGSAVVYAHMLRMIRIYARARILATTRYGAAQAAAPGADLEVIGGRRDGPLGCRITKETGKPIAVIVQRNHSRQFTNMDEIVTFVREAKYHPHVVTLDQMPFVDQVSLMSCASVLIAAHGAALSNIVYLDRNAGVVQVCPHGLSKLCKSFYGAMATAASVYHVQIDVRLGDTYFPHMPSSATQEEKAAYVETMTNAHEWFRLNKQSMRVDMNELSVALQTLEGSAKELSMFAVARNHTQAT* # PASA_UPDATE: g3967.t1, single gene model update, valid-1, status:[pasa:asmbl_8543,status:3], valid-1 NODE_624_length_20040_cov_49.6959 . gene 1239 4429 . - . ID=g3967;Name=g3967.t1 NODE_624_length_20040_cov_49.6959 . mRNA 1239 4429 . - . ID=g3967.t1;Parent=g3967;Name=g3967.t1 NODE_624_length_20040_cov_49.6959 . five_prime_UTR 4364 4429 . - . ID=g3967.t1.utr5p1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . five_prime_UTR 3951 4090 . - . ID=g3967.t1.utr5p2;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 4364 4429 . - . ID=g3967.t1.exon1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 3806 4090 . - . ID=g3967.t1.exon2;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . CDS 3806 3950 . - 0 ID=cds.g3967.t1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 3631 3705 . - . ID=g3967.t1.exon3;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . CDS 3631 3705 . - 2 ID=cds.g3967.t1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 3239 3352 . - . ID=g3967.t1.exon4;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . CDS 3239 3352 . - 2 ID=cds.g3967.t1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 2175 2930 . - . ID=g3967.t1.exon5;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . CDS 2175 2930 . - 2 ID=cds.g3967.t1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . exon 1239 2019 . - . ID=g3967.t1.exon6;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . CDS 1823 2019 . - 2 ID=cds.g3967.t1;Parent=g3967.t1 NODE_624_length_20040_cov_49.6959 . three_prime_UTR 1239 1822 . - . ID=g3967.t1.utr3p1;Parent=g3967.t1 #PROT g3967.t1 g3967 MPGDAARRQLPQGLDLILENFTREVLRSQPDDIIAFGVRYFTGLKNGEDMYGGPKKSSVGAAPVKAAVASAPAEHGHHNKSDVNVIELDSHASGTQTEESTQEPNVHEPGDEIHLQPVASPNPGRRGRRQSVSAESMQPDSDYEKVVIPKSEEKMERIREIITKNFLFSGLDREQSQDVVNAMFEKTVAAGEVVIQQGDDGDYFYVVDEGTFDIYVNKVGVDPPGEHVGGYKAGGGFGELALMYNTPRAATIVCTSPALLWAMDRVTFRRILMDTTARKRRMYESFLESVPLLEQLEAYERVKIADALETLTFQDGQTIVRQGDVGDRFYLVEYGEAICTVHDDADPNEEKQITTYKKGDYFGELALITKKPRAATVRAVGEVICASLDVDAFVRLLGPCADVMKRNIERYAEQLKELNIGRTPSPSQ* # PASA_UPDATE: g3970.t1, single gene model update, valid-1, status:[pasa:asmbl_8546,status:3], valid-1 NODE_624_length_20040_cov_49.6959 . gene 10701 15360 . + . ID=g3970;Name=g3970.t1 NODE_624_length_20040_cov_49.6959 . mRNA 10701 15360 . + . ID=g3970.t1;Parent=g3970;Name=g3970.t1 NODE_624_length_20040_cov_49.6959 . five_prime_UTR 10701 10835 . + . ID=g3970.t1.utr5p1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 10701 10922 . + . ID=g3970.t1.exon1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 10836 10922 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 11099 11215 . + . ID=g3970.t1.exon2;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 11099 11215 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 11427 11563 . + . ID=g3970.t1.exon3;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 11427 11563 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 11861 11954 . + . ID=g3970.t1.exon4;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 11861 11954 . + 1 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 12232 12294 . + . ID=g3970.t1.exon5;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 12232 12294 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 12666 12824 . + . ID=g3970.t1.exon6;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 12666 12824 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 13069 13104 . + . ID=g3970.t1.exon7;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 13069 13104 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 13334 13387 . + . ID=g3970.t1.exon8;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 13334 13387 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 13604 13807 . + . ID=g3970.t1.exon9;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 13604 13807 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 14108 14315 . + . ID=g3970.t1.exon10;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 14108 14315 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 14673 14803 . + . ID=g3970.t1.exon11;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 14673 14803 . + 2 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . exon 15065 15360 . + . ID=g3970.t1.exon12;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . CDS 15065 15160 . + 0 ID=cds.g3970.t1;Parent=g3970.t1 NODE_624_length_20040_cov_49.6959 . three_prime_UTR 15161 15360 . + . ID=g3970.t1.utr3p1;Parent=g3970.t1 #PROT g3970.t1 g3970 MVDDAKVEAAADATVAEATPAVEEKEKAAPKAKAPRAKKEKPAKKEAEVEGEGEGEAPKSIFDTTEVLRTERRRSAPQRLEATSTATPKKEVTIPNGKGTAFADIPNIKQFIERHTSKDLKLYHTFLFGAHGRELQFKDHLRKFKGFDFKDDADRKKKSASLESKSLNDLKKFATFLDVERSGTKEELSQRILGFLENPKSSGRKPATTPKKSPAKKAKSPKGKAKKASKKASKEDGAPKRPTTAFMCFAADRRPALRQEDPSAGVTDIARKTGEEWGKLTEDQKKKYAEIAALDKVRYEREMEDWKKSGGAAAAKKSPKKKAAPKKAAAKKSSPKKATKKSTAAVSSSDDSSDDSASSEDSSDEEEEKPKPKPKAKSPAKAAKRKAADSDDDDAPLAKKAKGGPSDDEVKAAIADIVASANLDQLTKRMVKDKLSAKFPEFDTVAKKDQLNDWINAAVSS* # PASA_UPDATE: g3969.t1, single gene model update, valid-1, status:[pasa:asmbl_8544,status:12],[pasa:asmbl_8545,status:12], valid-1 NODE_624_length_20040_cov_49.6959 . gene 5715 10039 . - . ID=g3969;Name=g3969.t1 NODE_624_length_20040_cov_49.6959 . mRNA 5715 10039 . - . ID=g3969.t1;Parent=g3969;Name=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 9974 10039 . - . ID=g3969.t1.exon1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 9974 10039 . - 0 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 9565 9694 . - . ID=g3969.t1.exon2;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 9565 9694 . - 0 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 9377 9466 . - . ID=g3969.t1.exon3;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 9377 9466 . - 2 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 8962 9089 . - . ID=g3969.t1.exon4;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 8962 9089 . - 2 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 8700 8857 . - . ID=g3969.t1.exon5;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 8700 8857 . - 0 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 8393 8469 . - . ID=g3969.t1.exon6;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 8393 8469 . - 1 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 8006 8135 . - . ID=g3969.t1.exon7;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 8006 8135 . - 2 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 7442 7636 . - . ID=g3969.t1.exon8;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 7442 7636 . - 1 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . exon 5715 7191 . - . ID=g3969.t1.exon9;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . CDS 5949 7191 . - 1 ID=cds.g3969.t1;Parent=g3969.t1 NODE_624_length_20040_cov_49.6959 . three_prime_UTR 5715 5948 . - . ID=g3969.t1.utr3p1;Parent=g3969.t1 #PROT g3969.t1 g3969 MSEELDAKVHKKYDVKQKLGKGAYGVVWRAVERKTGKIVALKKIFDAFQNDTDAQRTFREIMFLQEFSDHENVIKILNVHKAENDRDIYLAFEYMDTDLNLVIQSNLLSAVHKRYVMYQIFKCLRYIHSGNVIHRDMKPSNVLLNGECLARVADFGLARSVARNATIEQALTDYVATRWYRSPEILLGSNRYTKGVDMWSAGCIMAELLIGKPLFPGASTPNQMDRIMEVLGRPSTADIRSWAAPDAQGILDAIPMRKKRSLEEMMPLAPPEAVDLLRRLFNYNPNARITAEEALAHPYVAQFRDPKTEPTLDHDVIIPLDDYHRLSMADYRTKLYEHIVRKKKQLKLRRLEKAARLSRQQQQPGYDTDRSQRGAPTQQKAHDDRDRDGKGGPARSAWGADNRAPATKQTGQQQHQDRPLTSRMDKRAIDADLYSAYNYTPRGPGYNPPARANKNNRSGTGVADAFAGSSQQQQQQRPLTSRMDKRAIDAELYSAYNYTPRGPGYSAAPARPQQGRNGHQAPQQQQQQQQLTSRMDKRSIDADLYSAYGYTPRGYPKAPKPQQQPGAGYASAAPFHTEERTSSSSRQPTSSSHCIDPAKVAAVSRAPYATESPRGSSAGAGAAAQVRKSQSSSSYPTQYASDQPQRSSYQQQQQPQQQHDYSPRYDPRQSHAQPPAARSGQYDLYPQQQQSTPGRHSNPNPPRTPAGRTAGVASTAAPLSAQRPNTGYQSRPPWATDD* # ORIGINAL: g3966.t1 original gene structure, not modified by PASA NODE_624_length_20040_cov_49.6959 AUGUSTUS gene 286 982 . - . ID=g3966;Name=g3966.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS mRNA 286 982 . - . ID=g3966.t1;Parent=g3966;Name=g3966.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS exon 822 982 . - . ID=g3966.t1.exon1;Parent=g3966.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS CDS 822 982 . - 0 ID=cds.g3966.t1;Parent=g3966.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS exon 286 612 . - . ID=g3966.t1.exon2;Parent=g3966.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS CDS 286 612 . - 1 ID=cds.g3966.t1;Parent=g3966.t1 #PROT g3966.t1 g3966 MDNPLLSGETNERARQIRDLGARLGVKAINSTVGACKKCGQIGHLTFQCMNFIRVDPKKEVHLDISSTSSSDTSDSDDGARRPAPPPPPPPPPKEKKERKEKKAKKDKKDKKSRKSKKEGKEKKKHSRHRHRSSSDDDSSSDDEGESDRRKRRTEERKERRE # ORIGINAL: g3968.t1 original gene structure, not modified by PASA NODE_624_length_20040_cov_49.6959 AUGUSTUS gene 4859 5704 . + . ID=g3968;Name=g3968.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS mRNA 4859 5704 . + . ID=g3968.t1;Parent=g3968;Name=g3968.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS exon 4859 5704 . + . ID=g3968.t1.exon1;Parent=g3968.t1 NODE_624_length_20040_cov_49.6959 AUGUSTUS CDS 4859 5704 . + 0 ID=cds.g3968.t1;Parent=g3968.t1 #PROT g3968.t1 g3968 MRVVLLAGGYGTRLEQGFRADATGRFAHLIGVPKPLVPVGDVPLLSHWIRLIDLLLAKRDAQQIDETVLVTNDLHCGKFTAWAAAEGCDAVGKPRVRVVSDGTSTNDTRLGAVADIKLAADAFDSVDDVVVIGGDTLFRDDFSLAETARYFRSLPLGSSLVLSYECEDPRKHGIIVVDGTSNPPNRVVDFIEKPTPEQTTSRLACPCFYILSSEAMQLLRRFLEEKRNAPLHERDATGNAIAYIQRHSPVYALGISGRFDVGDVKTYVDCCDYFTEKARLK* # PASA_UPDATE: g3971.t1, single gene model update, valid-1, status:[pasa:asmbl_8547,status:3], valid-1 # PASA_UPDATE: g3971.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_8548,status:3], valid-1 NODE_624_length_20040_cov_49.6959 . gene 15796 19697 . + . ID=g3971;Name=g3971.t1 NODE_624_length_20040_cov_49.6959 . mRNA 15796 19697 . + . ID=g3971.t1;Parent=g3971;Name=g3971.t1 NODE_624_length_20040_cov_49.6959 . five_prime_UTR 15796 15926 . + . ID=g3971.t1.utr5p1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 15796 15965 . + . ID=g3971.t1.exon1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 15927 15965 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 16128 16241 . + . ID=g3971.t1.exon2;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 16128 16241 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 16480 16579 . + . ID=g3971.t1.exon3;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 16480 16579 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 16817 16906 . + . ID=g3971.t1.exon4;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 16817 16906 . + 2 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 17090 17251 . + . ID=g3971.t1.exon5;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 17090 17251 . + 2 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 17516 17643 . + . ID=g3971.t1.exon6;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 17516 17643 . + 2 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 17870 17989 . + . ID=g3971.t1.exon7;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 17870 17989 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 18308 18491 . + . ID=g3971.t1.exon8;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 18308 18491 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 18650 18894 . + . ID=g3971.t1.exon9;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 18650 18894 . + 2 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 19135 19242 . + . ID=g3971.t1.exon10;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 19135 19242 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . exon 19404 19697 . + . ID=g3971.t1.exon11;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . CDS 19404 19529 . + 0 ID=cds.g3971.t1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . three_prime_UTR 19530 19697 . + . ID=g3971.t1.utr3p1;Parent=g3971.t1 NODE_624_length_20040_cov_49.6959 . mRNA 15796 19697 . + . ID=g3971.t1.1.5b6be70c;Parent=g3971;Name=g3971.t1 NODE_624_length_20040_cov_49.6959 . five_prime_UTR 15796 15926 . + . ID=g3971.t1.1.5b6be70c.utr5p1;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 15796 15965 . + . ID=g3971.t1.1.5b6be70c.exon1;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 15927 15965 . + 0 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 16128 16241 . + . ID=g3971.t1.1.5b6be70c.exon2;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 16128 16241 . + 0 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 16480 16579 . + . ID=g3971.t1.1.5b6be70c.exon3;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 16480 16579 . + 0 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 16817 16906 . + . ID=g3971.t1.1.5b6be70c.exon4;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 16817 16906 . + 2 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 17090 17251 . + . ID=g3971.t1.1.5b6be70c.exon5;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 17090 17251 . + 2 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 17516 17643 . + . ID=g3971.t1.1.5b6be70c.exon6;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 17516 17643 . + 2 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 17870 17989 . + . ID=g3971.t1.1.5b6be70c.exon7;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 17870 17989 . + 0 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 18308 18894 . + . ID=g3971.t1.1.5b6be70c.exon8;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . CDS 18308 18673 . + 0 ID=cds.g3971.t1.1.5b6be70c;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 19135 19242 . + . ID=g3971.t1.1.5b6be70c.exon9;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . exon 19404 19697 . + . ID=g3971.t1.1.5b6be70c.exon10;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . three_prime_UTR 18674 18894 . + . ID=g3971.t1.1.5b6be70c.utr3p1;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . three_prime_UTR 19135 19242 . + . ID=g3971.t1.1.5b6be70c.utr3p2;Parent=g3971.t1.1.5b6be70c NODE_624_length_20040_cov_49.6959 . three_prime_UTR 19404 19697 . + . ID=g3971.t1.1.5b6be70c.utr3p3;Parent=g3971.t1.1.5b6be70c #PROT g3971.t1 g3971 MDANIILNTDSYKVAHYRQYPPGTTEVFSYFECRGGNVDESVFFGLQYIIKKYLVGPVVTEDKIREAAEFYQDHFNDGTLFNAAAWQYIIDKHGGHLPIRIRAVPEGTSIPLKNVLFTVENTDPNCAWLTNYLEALLVRIWYPITVATGSREQKKIIARFLDATSDNLDGLSFKLHDFGARGVSSGETSAIGSASHLVNFKGTDSIAGILMARHYYHEKMAGFSIPASEHSTITSWGREGELAAYRNMLEQFPTGMVACVSDSFDIFKACEEMWGTELRDLIVRRGETGGTLVIRPDSGDPPTIVLQLLDILGRQFGTTLNTKGFKVLPSYVRLIQGDGIDVNSLSIILQRMMDAGWSADNVGFGSGGALLQKLHRDTLKCAFKCSHAVINGKSVDVYKDPVTDPGKKSKKGRITLVRRNGEYITVSEPQDGDEDALVTVYENGRLLVDQTFAEIRKRAELPIVTDGSKQI* #PROT g3971.t1.1.5b6be70c g3971 MDANIILNTDSYKVAHYRQYPPGTTEVFSYFECRGGNVDESVFFGLQYIIKKYLVGPVVTEDKIREAAEFYQDHFNDGTLFNAAAWQYIIDKHGGHLPIRIRAVPEGTSIPLKNVLFTVENTDPNCAWLTNYLEALLVRIWYPITVATGSREQKKIIARFLDATSDNLDGLSFKLHDFGARGVSSGETSAIGSASHLVNFKGTDSIAGILMARHYYHEKMAGFSIPASEHSTITSWGREGELAAYRNMLEQFPTGMVACVSDSFDIFKACEEMWGTELRDLIVRRGETGGTLVIRPDSGDPPTIVLQLLDILGTWVYCMAAPLRLFGCAASRCWNPLRPFVSAFGLLRMHQTPMDVSAVCYFCPQGASLARR* # PASA_UPDATE: g1012.t1, single gene model update, valid-1, status:[pasa:asmbl_1938,status:12], valid-1 NODE_1550_length_10525_cov_38.5771 . gene 4873 7350 . + . ID=g1012;Name=g1012.t1 NODE_1550_length_10525_cov_38.5771 . mRNA 4873 7350 . + . ID=g1012.t1;Parent=g1012;Name=g1012.t1 NODE_1550_length_10525_cov_38.5771 . five_prime_UTR 4873 4918 . + . ID=g1012.t1.utr5p1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . exon 4873 5027 . + . ID=g1012.t1.exon1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . CDS 4919 5027 . + 0 ID=cds.g1012.t1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . exon 5474 5606 . + . ID=g1012.t1.exon2;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . CDS 5474 5606 . + 2 ID=cds.g1012.t1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . exon 6168 6240 . + . ID=g1012.t1.exon3;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . CDS 6168 6240 . + 1 ID=cds.g1012.t1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . exon 6611 6759 . + . ID=g1012.t1.exon4;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . CDS 6611 6759 . + 0 ID=cds.g1012.t1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . exon 7015 7350 . + . ID=g1012.t1.exon5;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . CDS 7015 7078 . + 1 ID=cds.g1012.t1;Parent=g1012.t1 NODE_1550_length_10525_cov_38.5771 . three_prime_UTR 7079 7350 . + . ID=g1012.t1.utr3p1;Parent=g1012.t1 #PROT g1012.t1 g1012 MAKDDEFFASHDPSKQTVGQRICYIFNGLLVSALPVYLFVEVLGLELTVDFSLPLVAIVSLVATFAIAHSYHNVARNVNQKLHRRRQEAVAAEVERNAGAKKGDKNALRKLTEEKTAAVVQHESVALSIFFNNAFFLFLAVLSAFWVFHAQAAHVNYVLSVGAASGLVALLSTSS* # ORIGINAL: g1013.t1 original gene structure, not modified by PASA NODE_1550_length_10525_cov_38.5771 AUGUSTUS gene 7808 10158 . - . ID=g1013;Name=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS mRNA 7808 10158 . - . ID=g1013.t1;Parent=g1013;Name=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS exon 10151 10158 . - . ID=g1013.t1.exon1;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS CDS 10151 10158 . - 0 ID=cds.g1013.t1;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS exon 9805 9970 . - . ID=g1013.t1.exon2;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS CDS 9805 9970 . - 1 ID=cds.g1013.t1;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS exon 8034 9344 . - . ID=g1013.t1.exon3;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS CDS 8034 9344 . - 0 ID=cds.g1013.t1;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS exon 7808 7882 . - . ID=g1013.t1.exon4;Parent=g1013.t1 NODE_1550_length_10525_cov_38.5771 AUGUSTUS CDS 7808 7882 . - 0 ID=cds.g1013.t1;Parent=g1013.t1 #PROT g1013.t1 g1013 MDGIKERVQKYTGKSEYEFGDLAKATFKRLSNATEPKPKAGLSREGSISSTEADKQTEAASKRSALEQQMLELLQFCSARLHVNGWKGKMSVTTSADIAFFSSKLKVSGVINRSHGSVSRAPDAVGGDADAAAAGSSSNVGDTAGDDPDAETGGEDGDDFEVVDPLECKTLPTDVLCNDRAPGSSASASRGSIVTDGRTWLRQRTRKQLLQAEQRVRSTAVHMRSSSISGAIGCGFRVTLPPWIVPGLFIELDVAIELELSSVIAVLEIGSVGGKTPAAAKVDAGGAVSAGSAAKSGMLATGNTSGPKPAAPDAKRDVADEATERFANAMLATQLRLRGLGWSGSVRLQADFGVVRLWISCPLRFMDATITATLPAGMPTVDDDQPASEDAADGTEGALSSAKSSPQASPGTTRKSDANGAAGKTQSQLSPKSAPQQQQQQQPAGAAGKGQRKEGPGGSLFRAALDRNIARIDRMAIAFAANGMSGSASAEFSFKVFGFGMTVEFEVDLTTTNVSISAK* # PASA_UPDATE: g1011.t1, single gene model update, valid-1, status:[pasa:asmbl_1937,status:12], valid-1 NODE_1550_length_10525_cov_38.5771 . gene 81 4419 . - . ID=g1011;Name=g1011.t1 NODE_1550_length_10525_cov_38.5771 . mRNA 81 4419 . - . ID=g1011.t1;Parent=g1011;Name=g1011.t1 NODE_1550_length_10525_cov_38.5771 . five_prime_UTR 4209 4419 . - . ID=g1011.t1.utr5p1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 4173 4419 . - . ID=g1011.t1.exon1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 4173 4208 . - 0 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 3862 4070 . - . ID=g1011.t1.exon2;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 3862 4070 . - 0 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 3484 3589 . - . ID=g1011.t1.exon3;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 3484 3589 . - 1 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 2667 3188 . - . ID=g1011.t1.exon4;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 2667 3188 . - 0 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 2305 2462 . - . ID=g1011.t1.exon5;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 2305 2462 . - 0 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 1690 1819 . - . ID=g1011.t1.exon6;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 1690 1819 . - 1 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 1402 1490 . - . ID=g1011.t1.exon7;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 1402 1490 . - 0 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 709 1248 . - . ID=g1011.t1.exon8;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 709 1248 . - 1 ID=cds.g1011.t1;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . exon 81 374 . - . ID=g1011.t1.exon9;Parent=g1011.t1 NODE_1550_length_10525_cov_38.5771 . CDS 81 374 . - 1 ID=cds.g1011.t1;Parent=g1011.t1;3_prime_partial=true #PROT g1011.t1 g1011 MASSLFSEGDFKEPFSSVEFLEKLQRRVSLSRDDARASLTLSPTPSEEADASFDPRPLQQLFDDSLSELTTLSGWVEKKIDRLERSCAEAEKAHRAKMRDLNKSYDVIVNSFQDLDERIKKVATKAVHLGDRLEAVNSKRVRATNARDLMRSFAEFDGPDSKALSLVFTEADRVHEAADVIQKLNVIAQELGGGDRYARARLRIEQKCSEIETAVMQMFVNAREMGDVKAMRECANTLYSFKGYSTCVDTYVNLHRFFKGTDGGGGGTGPMGRRTTNTADMFSDIVDACHKEYETIRAVFGNPAAVMAQFVQRVFEQSIQHHVELVMQEALATDKRAYLTQLNKLYEKTLELTSSLSALDLGQDPNLLSKLVDAVFCGYLGNYILYEEAFLQEAYSASAKSYYDSLGHAKRPAGPNRNLGLFQRVMKAANQPPESPALGGRGGLGSASASSLPKDSETETFLSIELALTMIHENREAISRCVRMSDPSELAGNMQRVFDRLLEHLCVEHVNYALDLASEKLGIEPKTEPTLVFFGVAQAANYSFHLLQNHFRESVAPALAGSVAAQTECIGKKNKIMELLEGKIASGLEKTLETIVIWLGRILETEQKKTEFRPNDDDLSVFTLPCTQACRKCCRFFTKQREAAQSSLDGYNADGFLTVLATRFHRVLTDHIRQQSINSLGGLLLTRDIAEYQN # PASA_UPDATE: g9569.t1, single gene model update, valid-1, status:[pasa:asmbl_5517,status:12], valid-1 NODE_3074_length_4388_cov_38.1753 . gene 186 1656 . + . ID=g9569;Name=g9569.t1 NODE_3074_length_4388_cov_38.1753 . mRNA 186 1656 . + . ID=g9569.t1;Parent=g9569;Name=g9569.t1 NODE_3074_length_4388_cov_38.1753 . five_prime_UTR 186 188 . + . ID=g9569.t1.utr5p1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . exon 186 244 . + . ID=g9569.t1.exon1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . CDS 189 244 . + 0 ID=cds.g9569.t1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . exon 540 691 . + . ID=g9569.t1.exon2;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . CDS 540 691 . + 1 ID=cds.g9569.t1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . exon 1001 1059 . + . ID=g9569.t1.exon3;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . CDS 1001 1059 . + 2 ID=cds.g9569.t1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . exon 1351 1656 . + . ID=g9569.t1.exon4;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . CDS 1351 1428 . + 0 ID=cds.g9569.t1;Parent=g9569.t1 NODE_3074_length_4388_cov_38.1753 . three_prime_UTR 1429 1656 . + . ID=g9569.t1.utr3p1;Parent=g9569.t1 #PROT g9569.t1 g9569 MLDVDEHARMSVRSIKHHPWLVMEHVRREAPIPIPAGVHGDPLKGTSLVPYLENVYLGSRESINHLAAQIGTLSASHERRDSIGSQSDKSHTRDVKTTTVKRFSLKSSQMCAQQ* # ORIGINAL: g9570.t1 original gene structure, not modified by PASA NODE_3074_length_4388_cov_38.1753 AUGUSTUS gene 1670 3598 . - . ID=g9570;Name=g9570.t1 NODE_3074_length_4388_cov_38.1753 AUGUSTUS mRNA 1670 3598 . - . ID=g9570.t1;Parent=g9570;Name=g9570.t1 NODE_3074_length_4388_cov_38.1753 AUGUSTUS exon 1670 3598 . - . ID=g9570.t1.exon1;Parent=g9570.t1 NODE_3074_length_4388_cov_38.1753 AUGUSTUS CDS 1670 3598 . - 0 ID=cds.g9570.t1;Parent=g9570.t1 #PROT g9570.t1 g9570 MRNRLQFFGVRKGISAAVLVFLVFLVLVQLFLISRIPFDYGQPDRSRKRAEPDSGDSVRIAPLDVDELTLIVGEGEQESDNLSAAPVPRNRVPVVSLHDGGAVVVEARTTTDVIFRKDGNAINAAMDDRLQAPVDQRRKELDDGLSPSKRAVEVDNLNVKKAAAQVEHKTDGLAPPASASNNTRPSYLQADGDQVGQRALPRPFQGFRKQLPDKSRPLPFAPDAPIVNRGGKVSAPWNHSVPFAYVAMVNGDDATVYVMIQGVRAIDVGHCGYMKGSEFVGASAQSEHFALRFSNLAIVRHLRGKGIAYNFALAVQCKLNDMFIESVMARERDTIFTIVTKSGYALPSTARYQRLLERGSSQPRHNLCTVSTVRNQAHRLPAWITYHRRVGVERFVFFNNNSTDALEDADLGSDVELIDWPFRKTQMTANLYGARLAKERCEWVALIDPDEYIFPVEMAISMQQRPASIVSILHETVTAEPRVGALHLTSRLMGSSFLRNRSKEMPPLVYLQHGKHPFEPNPKSIVHTDRILDQLSVHKWHTKEGYVEIKPPINAHHIVHYKLQSWEDYMQKYVNGRATSPDWPVDDPNAPLSIDKPSRTWTYLSKAHNVVLFTAFRDFYERVMSSRWPSREGGSQTATNTP* # PASA_UPDATE: g10272.t1, single gene model update, valid-1, status:[pasa:asmbl_6074,status:12], valid-1 NODE_3441_length_3459_cov_34.8248 . gene 189 2941 . - . ID=g10272;Name=g10272.t1 NODE_3441_length_3459_cov_34.8248 . mRNA 189 2941 . - . ID=g10272.t1;Parent=g10272;Name=g10272.t1 NODE_3441_length_3459_cov_34.8248 . five_prime_UTR 2804 2941 . - . ID=g10272.t1.utr5p1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 2738 2941 . - . ID=g10272.t1.exon1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 2738 2803 . - 0 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 2448 2516 . - . ID=g10272.t1.exon2;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 2448 2516 . - 0 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 2061 2122 . - . ID=g10272.t1.exon3;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 2061 2122 . - 0 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 1651 1726 . - . ID=g10272.t1.exon4;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 1651 1726 . - 1 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 1370 1445 . - . ID=g10272.t1.exon5;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 1370 1445 . - 0 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 1015 1056 . - . ID=g10272.t1.exon6;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 1015 1056 . - 2 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 372 484 . - . ID=g10272.t1.exon7;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 372 484 . - 2 ID=cds.g10272.t1;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . exon 189 274 . - . ID=g10272.t1.exon8;Parent=g10272.t1 NODE_3441_length_3459_cov_34.8248 . CDS 189 274 . - 0 ID=cds.g10272.t1;Parent=g10272.t1;3_prime_partial=true #PROT g10272.t1 g10272 MTSSASSADLDAQQTEILVMFQAVTGRDSFEECRQILEWNNWDVEAAVRSTLGIRDDVHAHVPQQRPASAATTGARRSQVQRHNNVNNNNIGWLSWIIVLPLRIASSVVSGGLGVIGRYLPTSVTTIISYAVGAVADDPVADATRLERDLERKYGGRPPRAIIGSYRQAIDRAKQDLSFLLVYLHSEEHEDTPKFC # ORIGINAL: g1065.t1 original gene structure, not modified by PASA NODE_534_length_21649_cov_40.1569 AUGUSTUS gene 8769 9358 . + . ID=g1065;Name=g1065.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS mRNA 8769 9358 . + . ID=g1065.t1;Parent=g1065;Name=g1065.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 8769 9021 . + . ID=g1065.t1.exon1;Parent=g1065.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 8769 9021 . + 0 ID=cds.g1065.t1;Parent=g1065.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 9210 9358 . + . ID=g1065.t1.exon2;Parent=g1065.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 9210 9358 . + 2 ID=cds.g1065.t1;Parent=g1065.t1 #PROT g1065.t1 g1065 MSLATVPRQFHFRELEVAFGSIFLRTFANTTAVIMLAITIALVTPSVGLPMDASFAPTASASSTSVPLSTDTPAYTVDIAEPKLSLTIGVSLGICIFVIALALFVYSPRVCRRTPSYAYVPLVNAADGSHDNH* # ORIGINAL: g1064.t1 original gene structure, not modified by PASA NODE_534_length_21649_cov_40.1569 AUGUSTUS gene 4609 7962 . + . ID=g1064;Name=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS mRNA 4609 7962 . + . ID=g1064.t1;Parent=g1064;Name=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 4609 4695 . + . ID=g1064.t1.exon1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 4609 4695 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 4892 5002 . + . ID=g1064.t1.exon2;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 4892 5002 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 5166 5192 . + . ID=g1064.t1.exon3;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 5166 5192 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 5545 5612 . + . ID=g1064.t1.exon4;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 5545 5612 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 5894 5991 . + . ID=g1064.t1.exon5;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 5894 5991 . + 1 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 6215 6396 . + . ID=g1064.t1.exon6;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 6215 6396 . + 2 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 6724 6860 . + . ID=g1064.t1.exon7;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 6724 6860 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 7104 7202 . + . ID=g1064.t1.exon8;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 7104 7202 . + 1 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 7364 7433 . + . ID=g1064.t1.exon9;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 7364 7433 . + 1 ID=cds.g1064.t1;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 7774 7962 . + . ID=g1064.t1.exon10;Parent=g1064.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 7774 7962 . + 0 ID=cds.g1064.t1;Parent=g1064.t1 #PROT g1064.t1 g1064 MSLWVDKYRPTSLDKLDYHKKQAAHLKQLVACGDFPHMLVYGPPGAGKKTRIMCLLRELYGNGVEKLKIEHRTFTTPSNAKIELTTIASNYHIEINPSDAGIHDRVVIQDVLKEIAQTQQLDSNAQRSFKVVVLGEVDKLSKDAQHALRRTMEKYTGTCRIVLCCNSTSKVIAPIRSRCLAVRVAAPTLDEIVSILNIVASKEKFSLPQEFARRVAEHSDRNLRKALLIMEASKVQQFPFTADQQIQMSDWELYIRDTATKIIEDQSPQRLLMIRGRLYELLVHCIPTDVIMKSLTVELTKNLDGQLKVDVTQWAAHYEHRMHLGSKPIYHLEAFVARFMSIYKKFLMEMEAMYS* # PASA_UPDATE: g1069.t1, single gene model update, valid-1, status:[pasa:asmbl_8013,status:12], valid-1 NODE_534_length_21649_cov_40.1569 . gene 17569 21340 . - . ID=g1069;Name=g1069.t1 NODE_534_length_21649_cov_40.1569 . mRNA 17569 21340 . - . ID=g1069.t1;Parent=g1069;Name=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 21182 21340 . - . ID=g1069.t1.exon1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 21182 21340 . - 0 ID=cds.g1069.t1;Parent=g1069.t1;5_prime_partial=true NODE_534_length_21649_cov_40.1569 . exon 20808 20917 . - . ID=g1069.t1.exon2;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 20808 20917 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 20415 20553 . - . ID=g1069.t1.exon3;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 20415 20553 . - 1 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 19899 19991 . - . ID=g1069.t1.exon4;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 19899 19991 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 19575 19679 . - . ID=g1069.t1.exon5;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 19575 19679 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 19318 19437 . - . ID=g1069.t1.exon6;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 19318 19437 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 18852 19093 . - . ID=g1069.t1.exon7;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 18852 19093 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 18556 18655 . - . ID=g1069.t1.exon8;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 18556 18655 . - 1 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 18198 18337 . - . ID=g1069.t1.exon9;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 18198 18337 . - 0 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . exon 17569 17913 . - . ID=g1069.t1.exon10;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . CDS 17712 17913 . - 1 ID=cds.g1069.t1;Parent=g1069.t1 NODE_534_length_21649_cov_40.1569 . three_prime_UTR 17569 17711 . - . ID=g1069.t1.utr3p1;Parent=g1069.t1 #PROT g1069.t1 g1069 IANIGPANYNTEETLSTLRFANRAKNIKNKPKINEDPKDALLREFQDEISRLKAELEKRRGGGGGGGTKTKKPRSSANREEFGSDDSDDEEGEEGGEDEDDGPVDERTAEEILKEEEAKLEKERQSLLQNKTMIEEEKQRVATELAERSKLLQKEYEERNAVAAKLKAIESKLLVGGVNIFDRTNQQERELEQKARDLEDKRRRERDLQQRLEARNEEKVDLEGKFGSLQEEVDGNTKKLKKLWAKVMGAKGEIDDLQEEFKREREDLLQTTYELSRELKLKSIIIDNFIPPEEVVKIEKRAIFDEEKDEWVLVTQAHVGHASKVKRPMSAVGHKRPVSEYARMASAMGDRNPRYKAENILQMELDMPDRTTMDYEGPQVAPRVQAALDAALQDEEEVTVEARRPSGDIFSTTDPYLKGGRSKSRAASAKPSTSKKSSRAEPEVDDDDDEDYGRRNSASRGGRKGKHYA* # ORIGINAL: g1063.t1 original gene structure, not modified by PASA NODE_534_length_21649_cov_40.1569 AUGUSTUS gene 122 3874 . - . ID=g1063;Name=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS mRNA 122 3874 . - . ID=g1063.t1;Parent=g1063;Name=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 3782 3874 . - . ID=g1063.t1.exon1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 3782 3874 . - 0 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 3460 3604 . - . ID=g1063.t1.exon2;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 3460 3604 . - 0 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 2764 3283 . - . ID=g1063.t1.exon3;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 2764 3283 . - 2 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 2080 2392 . - . ID=g1063.t1.exon4;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 2080 2392 . - 1 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 808 1812 . - . ID=g1063.t1.exon5;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 808 1812 . - 0 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 417 574 . - . ID=g1063.t1.exon6;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 417 574 . - 0 ID=cds.g1063.t1;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 122 197 . - . ID=g1063.t1.exon7;Parent=g1063.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 122 197 . - 1 ID=cds.g1063.t1;Parent=g1063.t1 #PROT g1063.t1 g1063 MSSTARAGYKPFSLVSVVDKVLGEKPQKGLQIECLDVYDGNLYIGTSDGFVFYYVIERMLSGATDTDAYHTRLEVKKSLGPRKAIERLLVLPRANKLVALIDGNLLVLGATTLNLEYQGAGLIKGVTCFCHDQRQRDGDSVLCVFRKKSFQLYAVAQDKISPIGKEHSVSETVIAARRYDDTICAAYARQYVLFSADGGQHTELFPFDAQKTAPLIVLTGPHEFLLSVSMSETDTLGMFVTSKGMTARPPLQWSSSPKSVVCRPPFVVGVVGDVVEVQGLIDQRQKQQLSFKGARYICAGDLGVPLVAGGNRVYAIIMAPPREQCLDLIAEGRVEEALALGDSLLGRARPHDDPAQMARDLRLVRQHAGFALLVQGGAAIATAADIFERSQLDPREFIAVFPDLLPAGTTFVSSLAVATRDKIAAAFVGDIKNAMYLYLGRIKSNARLSEGKNEEIDTAMLKLAADGVGGITPSALVALAGDATLGASPDCEEFLQLRGKHGALAAFCFAHGNARKAIELWMRLSEAQLTDAEEGVDWMGRIVDCLSSLDRSELVWKYAEWVLQRNVALGLKIFTARPQSEPAGMYNAESVLDYLEPFGREAVERYLEHLIAGGSTDEGHHTRLAMLYLDDLHARREMSGGLGRERLTLGENSPRTKLLRLLEGSTHYKVAAVLARIRDTDMYEECAVLYGRMGEHERALQLLVHKLGDYAAAERYCFVSRTDKATSRSLLVVLLKIYLTPSGTGEIKLDHVMNLVNNRAKDIDAIKVE* # PASA_UPDATE: g1066.t1, single gene model update, valid-1, status:[pasa:asmbl_8012,status:3], valid-1 NODE_534_length_21649_cov_40.1569 . gene 9819 12396 . - . ID=g1066;Name=g1066.t1 NODE_534_length_21649_cov_40.1569 . mRNA 9819 12396 . - . ID=g1066.t1;Parent=g1066;Name=g1066.t1 NODE_534_length_21649_cov_40.1569 . five_prime_UTR 12253 12396 . - . ID=g1066.t1.utr5p1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 12219 12396 . - . ID=g1066.t1.exon1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 12219 12252 . - 0 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 12022 12086 . - . ID=g1066.t1.exon2;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 12022 12086 . - 2 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 11586 11784 . - . ID=g1066.t1.exon3;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 11586 11784 . - 0 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 11088 11210 . - . ID=g1066.t1.exon4;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 11088 11210 . - 2 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 10764 10873 . - . ID=g1066.t1.exon5;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 10764 10873 . - 2 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . exon 9819 10587 . - . ID=g1066.t1.exon6;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . CDS 10201 10587 . - 0 ID=cds.g1066.t1;Parent=g1066.t1 NODE_534_length_21649_cov_40.1569 . three_prime_UTR 9819 10200 . - . ID=g1066.t1.utr3p1;Parent=g1066.t1 #PROT g1066.t1 g1066 MPDPKIVPLPWGDDIANLQRIKDVEVAFGTPNKFLQPGRYLIGEGRLSKVCRKKPKARQFFLFNDILVYGTILISKRKYTKQVVLDLRNMTVTRVDDTKDLQNAWQINTPSKSFVLFSVTPEEKEEWVAHIEKCVKDVSPAFLHQDGTQKAAVWVPDDKAVVCMQCQKTRFNPINRKHHCRACGKVVCGDCSKEKRHINHISDKPLRVCTTCAAVHPQSPLPAKKGPSGDVVGLGYSGDDAGGRGSGASAVDGSYIRDKIENDSPRASAPFRTSGGVTDERATEEMEQLGYLTAGNRASVFYPLD* # ORIGINAL: g1068.t1 original gene structure, not modified by PASA NODE_534_length_21649_cov_40.1569 AUGUSTUS gene 14540 17160 . + . ID=g1068;Name=g1068.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS mRNA 14540 17160 . + . ID=g1068.t1;Parent=g1068;Name=g1068.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 14540 14636 . + . ID=g1068.t1.exon1;Parent=g1068.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 14540 14636 . + 0 ID=cds.g1068.t1;Parent=g1068.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS exon 14822 17160 . + . ID=g1068.t1.exon2;Parent=g1068.t1 NODE_534_length_21649_cov_40.1569 AUGUSTUS CDS 14822 17160 . + 2 ID=cds.g1068.t1;Parent=g1068.t1 #PROT g1068.t1 g1068 MVGVVLDGHRIAVDYWQRSPGISSFFLSHMHADHTVGLKPSWNMGRIYCTAISKRILCHKFQIDPSIVSELEYNTATMVRVGPSDNVTVTAFDANHCPGSAMFLFQGAAGNVLYTGDFRYSSHLVDSFNHPLFLRAVPFSDTQSQTHKQRHSQPQCKGGVCVEKDLTPFGHPPIVCSTYSGSDDVDAADIHATSALVIDLLYLDNTYCSPLHESVPSRADAANRIVEIATDHPQCRILVAVDTLGKEEMLAHLARALDERVGVSPSRMATIAAIGGIEDGVPDVFTTDPLARVRVVQRHAVTTDALEKWNEECPTILVMATGMPLSAELRNWRPTQPTDCQRFAHPQTAPLTSSEEIVHADELVLGPAMTPASHVAPLQYVHAVPYSLHSSFSELRAFVSRLSVRKIRPIVPGYNADVEGHFAHLLLPPSERSTCESGLPAPANDAHVTIAHSDADDRVARERAHALARQPSDTAPPIAVVPRSRTRNLVEAVPLVRRNSGKGPAFAGLKRTSSEQQLKDNGTAVVRIAASGVESAHDGSSSTSSRAVDTSCAPAIAITATSFEWDPLIDNSAFKAEKFRDDDSISVLLRAAADAAELEEPTRRTSDVENVPPETAAATDTVGIPAPAVRLDQPRRLPSSFAQKTAPPPLARGMGASGYAAAQPLLQSQSQSQSQPQWRTAIPARVASVRDFYSPTQRNGAVHEGGDCDDASFSRGSEYAAAAALFSAKHARVVDSATPNDPSPSVSSSLAGDIGGMDSRGVSVLRPHSQTQPQAYDERCKDSASPPPKRQCTDHPPPPANVTAFFARFRR* # PASA_UPDATE: g1067.t1, single gene model update, valid-1, status:[pasa:asmbl_8011,status:3], valid-1 NODE_534_length_21649_cov_40.1569 . gene 12573 14148 . + . ID=g1067;Name=g1067.t1 NODE_534_length_21649_cov_40.1569 . mRNA 12573 14148 . + . ID=g1067.t1;Parent=g1067;Name=g1067.t1 NODE_534_length_21649_cov_40.1569 . five_prime_UTR 12573 12793 . + . ID=g1067.t1.utr5p1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . exon 12573 12803 . + . ID=g1067.t1.exon1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . CDS 12794 12803 . + 0 ID=cds.g1067.t1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . exon 12916 12935 . + . ID=g1067.t1.exon2;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . CDS 12916 12935 . + 2 ID=cds.g1067.t1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . exon 13082 13175 . + . ID=g1067.t1.exon3;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . CDS 13082 13175 . + 0 ID=cds.g1067.t1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . exon 13295 13387 . + . ID=g1067.t1.exon4;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . CDS 13295 13387 . + 2 ID=cds.g1067.t1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . exon 13613 14148 . + . ID=g1067.t1.exon5;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . CDS 13613 13833 . + 2 ID=cds.g1067.t1;Parent=g1067.t1 NODE_534_length_21649_cov_40.1569 . three_prime_UTR 13834 14148 . + . ID=g1067.t1.utr3p1;Parent=g1067.t1 #PROT g1067.t1 g1067 MPVGSKGTTSLSSLPLQAILYFDKTYFTLYWFIEALCFIYKGNVLPYPTHNLGAEVFLLFLFFPVQSTRIFLCMKGNLTERKVPILASILLAIPVLFTFLFFLLWQTYVLRLEQIVNYIGLAFLGIEFIFCITTVITFVRLSPYK* # PASA_UPDATE: g11092.t1, single gene model update, valid-1, status:[pasa:asmbl_6455,status:12], valid-1 NODE_3722_length_2895_cov_36.2677 . gene 269 1530 . + . ID=g11092;Name=g11092.t1 NODE_3722_length_2895_cov_36.2677 . mRNA 269 1530 . + . ID=g11092.t1;Parent=g11092;Name=g11092.t1 NODE_3722_length_2895_cov_36.2677 . five_prime_UTR 269 342 . + . ID=g11092.t1.utr5p1;Parent=g11092.t1 NODE_3722_length_2895_cov_36.2677 . exon 269 362 . + . ID=g11092.t1.exon1;Parent=g11092.t1 NODE_3722_length_2895_cov_36.2677 . CDS 343 362 . + 0 ID=cds.g11092.t1;Parent=g11092.t1 NODE_3722_length_2895_cov_36.2677 . exon 792 1530 . + . ID=g11092.t1.exon2;Parent=g11092.t1 NODE_3722_length_2895_cov_36.2677 . CDS 792 1530 . + 1 ID=cds.g11092.t1;Parent=g11092.t1 #PROT g11092.t1 g11092 MDHHCPWVNTCVGENNQRFFLVFLVYVGLTSIFSLLLVIGYHFFFPCPDCASASRSRGGFVLALTLLAFVFVVFIFIMISDQMGSIILDATLIERLPGRADGSRVNNINGSINHHHPNNNNNNNNNNTNNSGGAIIGGTIGSAGGVLSPAELESPNVHIGPQGLRSSASQELLLDHADDLSLRHVTPGGHSAHGTHAQHPGRRVPIATYYQRLQEFMDGDHWVHWFSPFRESSLVRQRRNSSGHPYGRIAFV* # ORIGINAL: g3897.t1 original gene structure, not modified by PASA NODE_2843_length_4997_cov_37.6802 AUGUSTUS gene 194 4777 . + . ID=g3897;Name=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS mRNA 194 4777 . + . ID=g3897.t1;Parent=g3897;Name=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS exon 194 1249 . + . ID=g3897.t1.exon1;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS CDS 194 1249 . + 0 ID=cds.g3897.t1;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS exon 1570 1682 . + . ID=g3897.t1.exon2;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS CDS 1570 1682 . + 0 ID=cds.g3897.t1;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS exon 1910 2052 . + . ID=g3897.t1.exon3;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS CDS 1910 2052 . + 1 ID=cds.g3897.t1;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS exon 2337 4777 . + . ID=g3897.t1.exon4;Parent=g3897.t1 NODE_2843_length_4997_cov_37.6802 AUGUSTUS CDS 2337 4777 . + 2 ID=cds.g3897.t1;Parent=g3897.t1 #PROT g3897.t1 g3897 MSRSVSDHTTKGVSSFTPSSYRQSAVLGRPVSGLNHSQSASSVGSHRPLSAHVQAATITTNATKALSPPHSPSEQRRPSSFADIKSFFQQTHAAPAAVDAPAYHAVSHAFAQPSVSPATLKQQRPVSRVFEGASVGTDARNTQRQQQQPQQQSHMQTQQQQQTGVAVNATAATDLQASVKPSIPQKPGIPPKPKSVISGTINGGGANGIVNEGGAVPRVNVSAAASNAQRPPTIAMEPPSHQTTIRSSSTRSASAPVGSLLRHDGVNTQLVNTTVSADTFAAAAPAEVNRSASPVPPPRPVSPVPGRPHSIASTGSGTRAPTSSQNEQIPRTRATSWGKPQPFSKRIVGDGEGAPSSLEESDATTLLLGSTFRVPRGNIDMMALFKEVAGIPTVLRTMPSPFLAAPPADLSHTVSCLPFSATVYLEGHLSQQDVSCTANTAAADVLSAVWDVFGLRGSAHDFLLRICGRTVRVDPLVTCPLVAYPHIRDSVRFGRDVAFVVENRTAAEASEFSPSKTSELSPTVPPAGTQLNECMIAPASDDLTGEWIASFVCDDDTPSVDDVPAMAAFVRARDRVLSCDRIGVAEATHVIQSTKAVCAAMGLIETIDVASASARLSSLLSANSNSNPTRNACDRSAVRDAIVALESALRHGSDVLRRACMGLVGPAGPSPTECDRRVLVSELRTPLRLGVRSLHRLPQEWRTYTTFRLEARLEYGCRPLCAPVTTPWMRRVAGAMLESCVWDENIAFPVAVCNLPPEARVTIVVSGMVAPYGPDGKDNRHLGADGRPAPTVSHLAWASVALFDARGYLVTGDHCVGLWPDEPPDTLQPATNSAIAGGGVWPAVMLRFDSHSSVAVRKPSRPSVQTGVSAEGRHPSVGARVIPTASFRASAPHPRGGIPEALHGYLMRPTTPADSCARDGVLWGTAEFVEALVDASAVASLFPTSIARFAAGIKPTMPANLVDLHRAVAVWPQIAPEDALALLLPHVTDCATRNLGARCLGAMPIDTLLHILPQLVQAIKCEHHLDSALVRLILSRVLSDQQTAMEFYWLMRREAADPELSPRFVPILSAFLWRAGPAFCQLVLRQIRLVTTLTRVAKDVKDGRNDVAKQRALKEGLSERPTSFAPPTAGMSRVFPVAVPVDCTVRASRIVADSARYFSSKTVPLMLPFAAADSTSGPAVQHPSHTYHAIFKAGDDLRQDTLTMQLIRLMDVMWLSEGLDMRMVSYRCVPTDDSSGFIEMVMGASTLRAIQ # ORIGINAL: g1550.t1 original gene structure, not modified by PASA NODE_262_length_28785_cov_52.1556 AUGUSTUS gene 9485 14002 . + . ID=g1550;Name=g1550.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS mRNA 9485 14002 . + . ID=g1550.t1;Parent=g1550;Name=g1550.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 9485 14002 . + . ID=g1550.t1.exon1;Parent=g1550.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 9485 14002 . + 0 ID=cds.g1550.t1;Parent=g1550.t1 #PROT g1550.t1 g1550 MDTTAGSLTHTTPAANIQELISTLKFIASTVIFNREQCRVLVSRVEALSPLVVSIAQSDFASNNATHGADECSHAVVEFTQCLVSLRTFLAIFAESAWCEQALKRGVEATSFVDWNARLAACAADANCAVAALCMGDAKAAKKRMINSDALFARGDLERAARADSHELAKREDSVVAAVVGSNAGASAAQFKSMLQDSVRFAFRATLEKTAVIAKPGTLHKEDEIGVEIPFYALGFDRKIGAGVSGDVWAGTWGSDAVAIKKLHHTGPATEAFRHDARLLGSIHNRHLIASFGACTEPGRLCLVMELMSESLDDLLHASPQEDVSWPLRLRLAEEIARGMAFLHRLRPPIYHGRLTSRNVLLDGDLHAKMCDYGGIGDVGVAARGAAGEHAAEDSHASMYAAPEHTAEGRRAVPTEKGDVFSYGILLFEIAARERPRAAMSNSFTHLSHVSPVGEKSSLAPSSSWPSQTSAVPADFGIIMGECLSRHPGDRPSFEDIHRRLAQARPVLPQDLKSSSGLVRSASVYDRPLTGPIDAPNRLGPSPSHMCDGNGSVDKCGGVDTVRGRVLVVGDSSVGKSSLVRCLVGMADKADMSSSQTHGIDSHTLTLPLFCQSGTDADREQISKVAQLTLLDFAGQEVYYNTHQLFIVGSHAVFVLVWSGRAGWPAQVARVRFWLESIATWASNATVVMVMTHADENALPKAEVMDAVLGQYAHRLKIVAHVAADARTGRNYAELRRAIGVACHLVLAMTPAPTKALVSLEAELRALQKPYALLSEVAPLAERSAVPLDVLPRALETLHGWGSVLWHGSSSETSAREDGDGRSTRAMTVTHGSASAGGGAVLGGLVVLDMAWVSCALSQVVTTRDDHRPINGVLRDQFAERLWTEAGIDVHTHRTLLCIMEEYELMYRIAPDESLVPCLLPEVLHSEVSQLARADELIPCRRYVLEFIPPFLFHRLQWRLQQYANGRNACWKSGTLLCVSGSASGGGTPTKASASVVLESRATEGSHVAGVITIATRTGQLDDLGRWATMVLRNMLVGDYAELASNVRVEVPCPSCTALASRPHSARAWFSQHDIYDELRESKGQAGATTVCGSRCRNVPVHSLVGALEMERWEHYLGSLTSSDTKFAAVASRYAYECAVLSNAPGLVSPVVSSVGGPPVGATRDADSDPQTDRTAKESTSGSPMANAGDHMQALGLNECDMRLATVAFNAADSSKFSALVEKLSSQVASRVAANLAREAGMRMREAALSSLASASSKSSALIESRLASIAAAVEGVATKVDQSAKMMVELDVRRIPTKFCVLPKPQAGSKGGAVAKIREFVAKANPRSWAKEHFVLHLLCDNGPHFTDHPGYEVERIKNAFRRALPLTIRTLRLVEMVLCSNAAAVVPYVDRAGEAAGVVGGYLGSLMDGDIADFKTLVAELDACKSVGGAAVGQTQEDRGDSRSEQAVSHSELDGVTIREFEALLRERDPHGHYGNLCKEVDRRTKCVRWLCRRCKASQPEWI* # ORIGINAL: g1554.t1 original gene structure, not modified by PASA NODE_262_length_28785_cov_52.1556 AUGUSTUS gene 22712 28506 . + . ID=g1554;Name=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS mRNA 22712 28506 . + . ID=g1554.t1;Parent=g1554;Name=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 22712 22891 . + . ID=g1554.t1.exon1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 22712 22891 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 22998 23189 . + . ID=g1554.t1.exon2;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 22998 23189 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 23312 23491 . + . ID=g1554.t1.exon3;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 23312 23491 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 23609 23710 . + . ID=g1554.t1.exon4;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 23609 23710 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 23822 23972 . + . ID=g1554.t1.exon5;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 23822 23972 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 24074 24167 . + . ID=g1554.t1.exon6;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 24074 24167 . + 2 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 24406 24472 . + . ID=g1554.t1.exon7;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 24406 24472 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 24610 24674 . + . ID=g1554.t1.exon8;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 24610 24674 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 24761 24919 . + . ID=g1554.t1.exon9;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 24761 24919 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 25042 25720 . + . ID=g1554.t1.exon10;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 25042 25720 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 25906 26648 . + . ID=g1554.t1.exon11;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 25906 26648 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 26744 26895 . + . ID=g1554.t1.exon12;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 26744 26895 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 27056 27170 . + . ID=g1554.t1.exon13;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 27056 27170 . + 2 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 27280 27427 . + . ID=g1554.t1.exon14;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 27280 27427 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 27534 27627 . + . ID=g1554.t1.exon15;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 27534 27627 . + 0 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 27782 27872 . + . ID=g1554.t1.exon16;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 27782 27872 . + 2 ID=cds.g1554.t1;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 28008 28506 . + . ID=g1554.t1.exon17;Parent=g1554.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 28008 28506 . + 1 ID=cds.g1554.t1;Parent=g1554.t1 #PROT g1554.t1 g1554 MEDPQLWPGPQAGFTVEETDMLKTTLNSSFYGFERHTIPGNFSDAEQSNFVHNVRNLVKRALKFYQNSLEDKSKAAEFVAESKAASDSLVARKYAQLGHLQLILNDFEKAYLSYEHVIAVRPPLDPYFWYGLGICAFYYGWWKKVDAILNFVLKIAPNFIRKGDALVRLGIASKNERHYEDALSYFNEAFTVPGQHRQTLTDSEIKFHIADTLLLQHKYGDAKRIYESLENSPDHVTNFSATMHLGLLYSEFNSFESAVHKFREAVSKDQRDYRAWYNLGRCFAEKQRFHEAFDALNKAIQMDGSSADCWLSIGVLYHRHHQGTYAFDMYRRALQYNRKCYQAWANLGTLYLSTDQLMEAENAYKHALQHSSGSTKQQILMQLQQTQQLQQTSHPHRSMRTNLYPAVEIDDDHHEGGHGGHGHQDMAMPGLAQQQHADKGMRAQHDGQLLVQEPALAPVPRPYDAMGYMHPYAPSYGPYVSISPYPPHGVQRPPVVYSNQPDIRLPSMKKRGRKPRVERDDFPEPKRAKLAPASEPANADDAKPPAHAEGPAVARAEVEGAVEESTIEGAVEVAAAAHADAEGVGHLSDESAAVAKEGDPKQQASGVESDSIDVQRAEVVDMQISSAIEAESPGVAEAAFDSTRSAAIFRGILQAVGIDMKVYATPTIVAVAPTLRIDTRTQRTDDTAPGSWACPSEPGQTTLSAYCRYQAYYAKNYEEDIGANVGACAPPPPRNAPSGDTTHVQDAQMDNSLLTTMAPHAHTDLEHNTSTDSAANISESSETAPRFITDQRDASADLLGEDRGSHETSQAAARRNLQKFIPSGPFAGCTPMSAIETAKYVSTKKLRHRKLFSRADNVKFATNIDITDRVRWEAQWREIEKLPAYMRIGNVCDALSYLGGKPVLGVNTVQIYAKVPGCKTPGHQENNSLCSINFSVGPGDCEWFVVHNRHWQKMKNLLDSRRHLDFMTSSWWPVAEELRADGIPVESFIQHSGDLVWISPGTVHWVRSLGVCNNVSWNVSPLIANQYMASCERADANDVEKFHSLVPMASLSYNLAQNAPMLSGDLALSISQHLDALVRRNEEELAELQAMGVAEPALREPTPDEPTAYHCCACQVEIFNIIYARPTQAGGSYEVYCAQCARNGATSALSRAHGKARQGGKNKGVHHKSEQATSLPGDVVVCMRRTHEDLTAAAKFFALRARILRGYEDDPKLMEETAPTRLQDAPLLLPRCATRP* # PASA_UPDATE: g1548.t1, single gene model update, valid-1, status:[pasa:asmbl_4684,status:3], valid-1 NODE_262_length_28785_cov_52.1556 . gene 4761 6608 . + . ID=g1548;Name=g1548.t1 NODE_262_length_28785_cov_52.1556 . mRNA 4761 6608 . + . ID=g1548.t1;Parent=g1548;Name=g1548.t1 NODE_262_length_28785_cov_52.1556 . five_prime_UTR 4761 4807 . + . ID=g1548.t1.utr5p1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . exon 4761 4886 . + . ID=g1548.t1.exon1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . CDS 4808 4886 . + 0 ID=cds.g1548.t1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . exon 5096 5148 . + . ID=g1548.t1.exon2;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . CDS 5096 5148 . + 2 ID=cds.g1548.t1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . exon 5312 5428 . + . ID=g1548.t1.exon3;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . CDS 5312 5428 . + 0 ID=cds.g1548.t1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . exon 5730 5845 . + . ID=g1548.t1.exon4;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . CDS 5730 5845 . + 0 ID=cds.g1548.t1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . exon 6119 6608 . + . ID=g1548.t1.exon5;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . CDS 6119 6284 . + 1 ID=cds.g1548.t1;Parent=g1548.t1 NODE_262_length_28785_cov_52.1556 . three_prime_UTR 6285 6608 . + . ID=g1548.t1.utr3p1;Parent=g1548.t1 #PROT g1548.t1 g1548 MSDNVADVLLLGSSGVGKTLLLKRMTKKCPVKREEGWPVPTIPTTGAELATIKPNRKKVVVRELGGCMGPVWPRYYQDCRLIWYMIDLSNWEQVASAAVGLWRLLAAPETRDASVLVLLNKCDVKSAMTYAEFDNTMRMDDLVATSPQAIETLPISAVEGWGVDGIHAWLRARGKL* # ORIGINAL: g1547.t1 original gene structure, not modified by PASA NODE_262_length_28785_cov_52.1556 AUGUSTUS gene 1406 4351 . - . ID=g1547;Name=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS mRNA 1406 4351 . - . ID=g1547.t1;Parent=g1547;Name=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 4060 4351 . - . ID=g1547.t1.exon1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 4060 4351 . - 0 ID=cds.g1547.t1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 3839 3942 . - . ID=g1547.t1.exon2;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 3839 3942 . - 2 ID=cds.g1547.t1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 3381 3461 . - . ID=g1547.t1.exon3;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 3381 3461 . - 0 ID=cds.g1547.t1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 3040 3120 . - . ID=g1547.t1.exon4;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 3040 3120 . - 0 ID=cds.g1547.t1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 2202 2777 . - . ID=g1547.t1.exon5;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 2202 2777 . - 0 ID=cds.g1547.t1;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 1406 2104 . - . ID=g1547.t1.exon6;Parent=g1547.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 1406 2104 . - 0 ID=cds.g1547.t1;Parent=g1547.t1 #PROT g1547.t1 g1547 MAEQVNALTAITDLNIAKVQADIDSIAAGIAKTIKKTKELKTLRKERELTHAETEKLTRRESRLQVLRGNESTLFTQKAALLTEKAELLKQKTIAFQAAVNVDALAFGESWLAMDICAVCVHVAIFTLVMFENTTSGHAPEGMTLKPKESSATAKVTKMITDASGRAPEGMMLKPRGTNGTKVTTKMSARFASSADTFLYMGREKFVELYESVCKLATGVRLNVCGTKGYGKSHLLAALAVCLLKEGSRVIYLPDAEMFTGLDHVVDAIPVAFYDKNDVLSALETCSTAAHLISLIGQQEDVYLIVDQMNPAADISDKRGRMKGQTDERTDIEQKISNIRAARKIFGYSANNKFVRGLKGSDRRYGQKDFCLLGGYAENEFNAWLDHCRGWESLGVIVDEVKEETGLSPLYCAQVHNALMSLGDTNGSDMPAKLHVEERRDTAVCGVAPVLGIVSTGGKSIGSSVVVQEADVAKVNAVRAALKLIWSQTYADVVQFFEYVKTESATSLGRAVRAAELAVARLSLLGADGGPVLPTDFDYRYVIFEPVPNAYRCVSGIAESVFVAVVREFGEHRDEFALQPHWFEVMRRSIRTSKGYMVETSVQLQASGLV* # PASA_UPDATE: g1551.t1, single gene model update, valid-1, status:[pasa:asmbl_4682,status:12], valid-1 NODE_262_length_28785_cov_52.1556 . gene 14276 16646 . - . ID=g1551;Name=g1551.t1 NODE_262_length_28785_cov_52.1556 . mRNA 14276 16646 . - . ID=g1551.t1;Parent=g1551;Name=g1551.t1 NODE_262_length_28785_cov_52.1556 . exon 16440 16646 . - . ID=g1551.t1.exon1;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . CDS 16440 16646 . - 0 ID=cds.g1551.t1;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . exon 16180 16292 . - . ID=g1551.t1.exon2;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . CDS 16180 16292 . - 0 ID=cds.g1551.t1;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . exon 14276 15961 . - . ID=g1551.t1.exon3;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . CDS 14329 15961 . - 1 ID=cds.g1551.t1;Parent=g1551.t1 NODE_262_length_28785_cov_52.1556 . three_prime_UTR 14276 14328 . - . ID=g1551.t1.utr3p1;Parent=g1551.t1 #PROT g1551.t1 g1551 MASHPCARPSAVLLVVLVACLACVDSKRHPIFDQTKPMILWEGPMFNQSDAAVVADDLLSRLRKNSGLEVGAVATDENDGYRNISALPEAARAAFHTKLDAPDIVIRHEAFLRFDPPSSPTSRLVLYDTWEKGAITRDDVDRINAVVDEVWVPSNFVRDIHLAAGVSAYKVHVVSPGVDSLAFNPDVPSILGLTRRQFRFCYAGALDWITGIDVLLKVYSEEFSSADNVALLVRAEGVHANLGERKNRIGRDPVDVDAATPDFGWFVERQIERLDSMRDKLGGRPEVVVIGDELPRAHMPNFYASCDTVVAPFRTDGFARSVVEGMAAGRPPIVTDFGSASEYCTRDTAYHVDIGNWVETAVDSGLKGHFVEPDATSLAIAMRKAFEDGDERYAKGAAARAAILDLQDAAIGDSFGGKGRYRAPLNGSQESETSSSPKQSDARRLPLSWEHMYKTVLVRVATLMRKDVERIHARKVEDARKSARRGDLKVARRSLSGVLREAPYHVSANLELADVAEQLDLHAIAAHCHERLAHALKVDAGGLEPDSNATLYHSYHAGRLLYLDGNLEESQKWFEAALEIEPCHLDAMLTLGELLMETEEFMTLVELGERAFKCAPHDKRVIAMITKTAKVLEEIDPEAEQSISDSLTHL* # PASA_UPDATE: g1549.t1, single gene model update, valid-1, status:[pasa:asmbl_4681,status:3], valid-1 NODE_262_length_28785_cov_52.1556 . gene 6783 8867 . - . ID=g1549;Name=g1549.t1 NODE_262_length_28785_cov_52.1556 . mRNA 6783 8867 . - . ID=g1549.t1;Parent=g1549;Name=g1549.t1 NODE_262_length_28785_cov_52.1556 . five_prime_UTR 8799 8867 . - . ID=g1549.t1.utr5p1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 8787 8867 . - . ID=g1549.t1.exon1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 8787 8798 . - 0 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 8405 8525 . - . ID=g1549.t1.exon2;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 8405 8525 . - 0 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 8132 8240 . - . ID=g1549.t1.exon3;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 8132 8240 . - 2 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 7900 7976 . - . ID=g1549.t1.exon4;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 7900 7976 . - 1 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 7383 7540 . - . ID=g1549.t1.exon5;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 7383 7540 . - 2 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . exon 6783 7205 . - . ID=g1549.t1.exon6;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . CDS 6801 7205 . - 0 ID=cds.g1549.t1;Parent=g1549.t1 NODE_262_length_28785_cov_52.1556 . three_prime_UTR 6783 6800 . - . ID=g1549.t1.utr3p1;Parent=g1549.t1 #PROT g1549.t1 g1549 MRFKVLDAGAYASLEVTLHRGETVKAESDAMVSTSGDVAIGGRMDGGILSGLARSLFTGESFFLQTLTAEGEASDVVLAPKYPGDIILLDVRPRHEYMLQKGAYLASEPGVSIVSAVDSNLMRGAFSGQGFFLLKAAGQGTVAISAYGTTLRYQLGPGQARVVDNGHVVAWTAGMTYNIEMASRGILNSMTSGEGLVCRFVGPGEVYVQSRSSESLGEWLGVSPQAAANGTAARQRSSPVAQICFAIFFFGIFIFIAGGIILSIFFGGSSSLSASGGMGGGRQGGYGGGMQYP* # PASA_UPDATE: g1553.t1, single gene model update, valid-1, status:[pasa:asmbl_4685,status:3], valid-1 # PASA_UPDATE: g1553.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4686,status:12], valid-1 NODE_262_length_28785_cov_52.1556 . gene 18569 21844 . + . ID=g1553;Name=g1553.t1 NODE_262_length_28785_cov_52.1556 . mRNA 18569 21844 . + . ID=g1553.t1;Parent=g1553;Name=g1553.t1 NODE_262_length_28785_cov_52.1556 . five_prime_UTR 18569 18813 . + . ID=g1553.t1.utr5p1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 18569 19398 . + . ID=g1553.t1.exon1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 18814 19398 . + 0 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 19559 19766 . + . ID=g1553.t1.exon2;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 19559 19766 . + 0 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 19853 20033 . + . ID=g1553.t1.exon3;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 19853 20033 . + 2 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 20266 20432 . + . ID=g1553.t1.exon4;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 20266 20432 . + 1 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 20539 20633 . + . ID=g1553.t1.exon5;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 20539 20633 . + 2 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . exon 20733 21844 . + . ID=g1553.t1.exon6;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . CDS 20733 20888 . + 0 ID=cds.g1553.t1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . three_prime_UTR 20889 21844 . + . ID=g1553.t1.utr3p1;Parent=g1553.t1 NODE_262_length_28785_cov_52.1556 . mRNA 18569 21844 . + . ID=g1553.t1.1.5b6be70b;Parent=g1553;Name=g1553.t1 NODE_262_length_28785_cov_52.1556 . five_prime_UTR 18569 18813 . + . ID=g1553.t1.1.5b6be70b.utr5p1;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 18569 19398 . + . ID=g1553.t1.1.5b6be70b.exon1;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 18814 19398 . + 0 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 19559 19766 . + . ID=g1553.t1.1.5b6be70b.exon2;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 19559 19766 . + 0 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 19853 20033 . + . ID=g1553.t1.1.5b6be70b.exon3;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 19853 20033 . + 2 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 20266 20432 . + . ID=g1553.t1.1.5b6be70b.exon4;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 20266 20432 . + 1 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 20539 20633 . + . ID=g1553.t1.1.5b6be70b.exon5;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 20539 20633 . + 2 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 20733 21135 . + . ID=g1553.t1.1.5b6be70b.exon6;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . CDS 20733 20888 . + 0 ID=cds.g1553.t1.1.5b6be70b;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 21289 21388 . + . ID=g1553.t1.1.5b6be70b.exon7;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . exon 21484 21844 . + . ID=g1553.t1.1.5b6be70b.exon8;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . three_prime_UTR 20889 21135 . + . ID=g1553.t1.1.5b6be70b.utr3p1;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . three_prime_UTR 21289 21388 . + . ID=g1553.t1.1.5b6be70b.utr3p2;Parent=g1553.t1.1.5b6be70b NODE_262_length_28785_cov_52.1556 . three_prime_UTR 21484 21844 . + . ID=g1553.t1.1.5b6be70b.utr3p3;Parent=g1553.t1.1.5b6be70b #PROT g1553.t1 g1553 MNSLWDFGRSFVATHFAKRPREADDIGDDGSSHHQVLEHDRPSLQHSVSQYRSPRSSQHDGRPQERHSSSHRHREREYDDAGSLYASARDIDHVWRDNGRRSNSATRRFHSSATEPHAPRMPSHDRHHRVERSERGEGGRPSRKRRRIEELVFQEPEPKKEQSRSSHLKMPSRTRSRIEPRFAEVKADGVQRASTGSNGGYAPVGPAPPSAPVLRSSVETARALMSVAAKSAHLSNQEQEMVRPEYDDENGHYKYAEGELLDQRYFVKRKLGEGTFGKVLECHDYKKNKDVAVKVIKNIPKYRQAATIEIGVLLELKKHDPTGENRCIELISYFEFRNHVCMVFDLLGISLFDFLKANDFCPFPLEHIRHFAFQMVKAVEYMHRLLLVHTDLKPENILLMDETSKSYYDRRKRKPCRRLLDTSIKIIDFGSATFHDQHHTTIVCTRHYRAPEIVLGGCLHSQL* #PROT g1553.t1.1.5b6be70b g1553 MNSLWDFGRSFVATHFAKRPREADDIGDDGSSHHQVLEHDRPSLQHSVSQYRSPRSSQHDGRPQERHSSSHRHREREYDDAGSLYASARDIDHVWRDNGRRSNSATRRFHSSATEPHAPRMPSHDRHHRVERSERGEGGRPSRKRRRIEELVFQEPEPKKEQSRSSHLKMPSRTRSRIEPRFAEVKADGVQRASTGSNGGYAPVGPAPPSAPVLRSSVETARALMSVAAKSAHLSNQEQEMVRPEYDDENGHYKYAEGELLDQRYFVKRKLGEGTFGKVLECHDYKKNKDVAVKVIKNIPKYRQAATIEIGVLLELKKHDPTGENRCIELISYFEFRNHVCMVFDLLGISLFDFLKANDFCPFPLEHIRHFAFQMVKAVEYMHRLLLVHTDLKPENILLMDETSKSYYDRRKRKPCRRLLDTSIKIIDFGSATFHDQHHTTIVCTRHYRAPEIVLGGCLHSQL* # ORIGINAL: g1552.t1 original gene structure, not modified by PASA NODE_262_length_28785_cov_52.1556 AUGUSTUS gene 17006 18263 . + . ID=g1552;Name=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS mRNA 17006 18263 . + . ID=g1552.t1;Parent=g1552;Name=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 17006 17122 . + . ID=g1552.t1.exon1;Parent=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 17006 17122 . + 0 ID=cds.g1552.t1;Parent=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 17372 17504 . + . ID=g1552.t1.exon2;Parent=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 17372 17504 . + 0 ID=cds.g1552.t1;Parent=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS exon 17611 18263 . + . ID=g1552.t1.exon3;Parent=g1552.t1 NODE_262_length_28785_cov_52.1556 AUGUSTUS CDS 17611 18263 . + 2 ID=cds.g1552.t1;Parent=g1552.t1 #PROT g1552.t1 g1552 MAPPNRSRGGSNAPSAPPQPVKSKSVKQRIRDLERLLRKEDLPMTVRQAQERVLNSLKMQFGDKKKSELEKKVVKKYRMVKFFERRKLIRKIKTCEKKAAAGDEESSAQLSKLQSDLNYVTHFPKDQKYISLFPSTPLSDTKVIARRERIYAEINAAVAQGGLPMATFEEDGDDGDDAPKARGGNHTAIVDSEPEDSGDSDAPAKATSGPKNSKQQQPQSQKNGKQQAQQSQKTGGGRPTAPPAVHGDAESRKRKAGDEAKATAKRPKTVARVKVPKAAVDVDDAGQQDAEVPDDFFVSA* # ORIGINAL: g1290.t1 original gene structure, not modified by PASA NODE_3289_length_3814_cov_66.3576 AUGUSTUS gene 313 2423 . - . ID=g1290;Name=g1290.t1 NODE_3289_length_3814_cov_66.3576 AUGUSTUS mRNA 313 2423 . - . ID=g1290.t1;Parent=g1290;Name=g1290.t1 NODE_3289_length_3814_cov_66.3576 AUGUSTUS exon 2340 2423 . - . ID=g1290.t1.exon1;Parent=g1290.t1 NODE_3289_length_3814_cov_66.3576 AUGUSTUS CDS 2340 2423 . - 0 ID=cds.g1290.t1;Parent=g1290.t1 NODE_3289_length_3814_cov_66.3576 AUGUSTUS exon 313 2046 . - . ID=g1290.t1.exon2;Parent=g1290.t1 NODE_3289_length_3814_cov_66.3576 AUGUSTUS CDS 313 2046 . - 0 ID=cds.g1290.t1;Parent=g1290.t1 #PROT g1290.t1 g1290 MSGQVDVISGDDGDPDYVESEAVDQDGGSPSNTPGDDDSIAAEARKALALNRAVQQRLTVQLRRIEQAQSRNAELRRKLTSIVMHSHRPAARRETLGLLRKFIGPYFVDVNGEAPPDNEDAAEKRVLTAKAPVTHRTRKWTEAEQAALAQGVRQKNQELLMRPLQEEARAGRPGAEIARRLEAIRAIPHRELEMNFRGIDWDRLASVHVPGRSGLDCRIQWLNNDHPVINKGPWTKHEDRTITRLAREKGELHWEAVAQALGTNRTAAQCLSRYQRVLNPGMLRSKWSPDEDAALAAAVRRHGEGNWQQVASDLDGRTGQQCLHRWQKTLNPAIRRGKWTEEEDSALRRAVERFGVGNWFKVQSLVTGRTDVQCRERWVNVLDPALCHLPWSREEDARLLGAVAQYGTGKWSRIAQELPPRTDNQCWRRYKSLMPVEAADHRMQQGVSGLGNRRKRPLDAPADESEQAAAKRARELGGHVAGGDGGVGSTGGPAEQRPAGTAPTIPVTPVTPVSHGPSGAVHMLRLSCPVVNANGIPVIGTSAPRNPSSLIPGIAATAPGPGPGAGHGVQREGMQGGIAAGASREGREGDVHAEAGGAGVRSMFET # ORIGINAL: g13455.t1 original gene structure, not modified by PASA NODE_1226_length_12903_cov_42.4541 AUGUSTUS gene 11008 12388 . - . ID=g13455;Name=g13455.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS mRNA 11008 12388 . - . ID=g13455.t1;Parent=g13455;Name=g13455.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 12181 12388 . - . ID=g13455.t1.exon1;Parent=g13455.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 12181 12388 . - 0 ID=cds.g13455.t1;Parent=g13455.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 11008 11996 . - . ID=g13455.t1.exon2;Parent=g13455.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 11008 11996 . - 2 ID=cds.g13455.t1;Parent=g13455.t1 #PROT g13455.t1 g13455 MANSLSVARDRLDLQVLVGQYYDERCDIYSFGMVLFEISARSYPFEDVLQRIHEQPMFLERLAVQVAREGIRPDFRPCTPDEFVALVLSCWHQSAKERRSLVDVIHDLKLLLERKEDFRGIPDHLFKAPPMDFGEGDETVVSDEDVHPPSPMAQRRASQRRKQRRSGGQTPRSRGSFTDVLAENEVAEQPTEPAADAFKMLAVLSNGSAALRSYITKRLRSPNVERREPASVSSTPKDTGSSVVRSKAQSLIHAYKVRSHPTVPTAAPQPPNAAASEVIVDVNEGGDKRVAGSGRSSGGVGGGGEAPLQASGRAAELAVGGEMQLEKPPSPFGPPPGIALPMANVAPGDSADSHSNSHSENMAVAAEGEGKNGPHGRHPSLPLNFRHSNTGDARLADV* # ORIGINAL: g13452.t1 original gene structure, not modified by PASA NODE_1226_length_12903_cov_42.4541 AUGUSTUS gene 977 5672 . - . ID=g13452;Name=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS mRNA 977 5672 . - . ID=g13452.t1;Parent=g13452;Name=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 4760 5672 . - . ID=g13452.t1.exon1;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 4760 5672 . - 0 ID=cds.g13452.t1;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 2947 4373 . - . ID=g13452.t1.exon2;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 2947 4373 . - 2 ID=cds.g13452.t1;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 2568 2692 . - . ID=g13452.t1.exon3;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 2568 2692 . - 0 ID=cds.g13452.t1;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 977 2381 . - . ID=g13452.t1.exon4;Parent=g13452.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 977 2381 . - 1 ID=cds.g13452.t1;Parent=g13452.t1 #PROT g13452.t1 g13452 MDSPDSERNHDTHADNDDEGTLIDDVSAAHTSIGAESSSFRVETHDHVPGITAVDESLDVSAALAALDIDRDYERSILEAVDGIDSALAHAETATTGADDTISLGSSKAPSQSQVQTHLLGASLSKTSLVKPVTSARVLSRPASAIDYEIEGSAHDSFLAAVVADVPNSVGLESNLLALDEAVASPCPVAVTGEKGTGKTRLLAEFVDRRKAAPNATDILFYHFVGCNGRSGSPTSLLGRLSKCLAAALGMSARFDPPSEHDRLRDKAAELLMRANDRGMHVTCVVDGLDRLEGRPPFGSWLPAGALSSCRFVFSVAPGSWKDVVERLGFKAKLREIFLSQMSDRDAGTLALVISKAVSDSTLTSAQLNALASRLRVPRRLSLAVRLALPAKGADGSLRGAVAVDAAVAMEESALFAALVGRSAAEHRQGLDSSVGAGEDPFTDALVMIALSRNGLLPDEVRASLQLDRTVWGGVLSTLLADGFALTSASGHLIARHRSLVLAMAGIPQVDVTPAHLLAASHTDALDREHKSLSERATGPCRRLATYFGALVGGSSDRDCRRAADELPWLLLRLGRTDELKAALSPRIAFERMLATDRHTLRAMWKVVGTGGPEIASLYTRTLGREGGAGPDLYGRAAILIGDLGHPASGVGLAELSLKLVEDSVGRKHPAYADACNRLGQLQWMVGRLDEAVRWHRTALDVIDGPADMRDRSKSVSSITSTTANARNPRAALFSTLRLLGAAEAALGRYEDALHATERALDVQEHLLGLDHVEVASTCESIGHLHSHLDHNEDAIVFYERCLGIRESVLGVAHPSVVVACRSIANARMRNHQFALAVPILERCLDLLRQRLGPSHREVAIALVHLGVAIARASTVADQGEANSRKKTKSGTVARVASSIVILGRRLSVVIAGDKDATIRKTVNGTPSETPVDIAFNFLKAALKTFEALEDMAGISAACDNLAVLSGRVRDYDGAVEYHRRALKCRQTMYGEDHAEVATSLNDIGACLVMAGRPGEAIQTHLRALDIRERAFGSAHPATATALANLAVAQEVAGRLEEAVGTLRRALAAAEAARDAGADKFAASKEPGSASSALQRVTDESLALAVADACSALGVLLVRTSPKGVRSSSPIAEEALGLLRRALDIREKALGAIELKGNAFASDYIVDDSVIKACTNLGRAYVAFGEHALAADFFAQCCRALERAAGHGSSAAARKEAEAAGRPDRDSVALASALSVLASAQYQIRDYDNSRMNFDRALEMRKRLFGERHKETVALRKYIAGKKFPAGGK* # ORIGINAL: g13451.t1 original gene structure, not modified by PASA NODE_1226_length_12903_cov_42.4541 AUGUSTUS gene 119 329 . + . ID=g13451;Name=g13451.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS mRNA 119 329 . + . ID=g13451.t1;Parent=g13451;Name=g13451.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 119 329 . + . ID=g13451.t1.exon1;Parent=g13451.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 119 329 . + 1 ID=cds.g13451.t1;Parent=g13451.t1 #PROT g13451.t1 g13451 GKESLRRGSLDSVRSFYSARSTFGDGSVAGSVADSASVASKSPRSASISSVAKAAARSQRSGSGSAKAR* # ORIGINAL: g13453.t1 original gene structure, not modified by PASA NODE_1226_length_12903_cov_42.4541 AUGUSTUS gene 6240 7103 . + . ID=g13453;Name=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS mRNA 6240 7103 . + . ID=g13453.t1;Parent=g13453;Name=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 6240 6372 . + . ID=g13453.t1.exon1;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 6240 6372 . + 0 ID=cds.g13453.t1;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 6546 6618 . + . ID=g13453.t1.exon2;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 6546 6618 . + 2 ID=cds.g13453.t1;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 6701 6819 . + . ID=g13453.t1.exon3;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 6701 6819 . + 1 ID=cds.g13453.t1;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 6949 7103 . + . ID=g13453.t1.exon4;Parent=g13453.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 6949 7103 . + 2 ID=cds.g13453.t1;Parent=g13453.t1 #PROT g13453.t1 g13453 MDAPQSAAGDARRARRNSVFAYDPRSPSRSVYGYVLYGITLLLLGAFIIWAYVPDAWLHALHITYYPQKYWAIAIPAYLCIVWIFIFLVFHSLTLLATPDFESINAIRDEYSVPVRSPVHPEGIPPLGDMDISAINRHRYDDMSLPHDSKVSYRSLPVR* # ORIGINAL: g13454.t1 original gene structure, not modified by PASA NODE_1226_length_12903_cov_42.4541 AUGUSTUS gene 8404 10182 . + . ID=g13454;Name=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS mRNA 8404 10182 . + . ID=g13454.t1;Parent=g13454;Name=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 8404 8561 . + . ID=g13454.t1.exon1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 8404 8561 . + 0 ID=cds.g13454.t1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 8776 8919 . + . ID=g13454.t1.exon2;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 8776 8919 . + 1 ID=cds.g13454.t1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 9132 9177 . + . ID=g13454.t1.exon3;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 9132 9177 . + 1 ID=cds.g13454.t1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 9430 9581 . + . ID=g13454.t1.exon4;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 9430 9581 . + 0 ID=cds.g13454.t1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 9735 9843 . + . ID=g13454.t1.exon5;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 9735 9843 . + 1 ID=cds.g13454.t1;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS exon 9994 10182 . + . ID=g13454.t1.exon6;Parent=g13454.t1 NODE_1226_length_12903_cov_42.4541 AUGUSTUS CDS 9994 10182 . + 0 ID=cds.g13454.t1;Parent=g13454.t1 #PROT g13454.t1 g13454 MDLIDIGANLAHRTFGKNIDNVVNSSRAAGVHRIVATGTGTVASKAVVALARRYPGTIFATCGVHPHEARLLNENAFAELSRLAASPEVVAVGECGLDFDRDFSPRDVQERAFESQIRLACQLRKPLFLHERAAHERFCEVFSRFPPESLPRCVVHCFTGTEQELDRYLSMGFYIGITGWICDDRRGLELQRIVRKVPLDKIMIETDAPFLTPRTIKPRPSHCEPRHLTAVLETTSDCMGLTVAELAAHTTRNAEVFFALGGKST* # ORIGINAL: g5146.t1 original gene structure, not modified by PASA NODE_1020_length_14634_cov_56.2425 AUGUSTUS gene 83 667 . + . ID=g5146;Name=g5146.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS mRNA 83 667 . + . ID=g5146.t1;Parent=g5146;Name=g5146.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 83 667 . + . ID=g5146.t1.exon1;Parent=g5146.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 83 667 . + 0 ID=cds.g5146.t1;Parent=g5146.t1 #PROT g5146.t1 g5146 MEGLVQIGINNEMNGALLTAYALVTALLIGCNLFALLIATCLLPTLESSNLLDGADGERLPEESQDHRQSDARSDIGRGSEEMLTLMEETSAVDNDDGFAMYEAKFRKYIVAAWVLSTGCGIVLFAVDMALIGWIQFYRFKYAAAAVTIVSIPVFFVIIYFGFNFYQTIVGIQLEAHKRALERAMQTTTLSYRV* # PASA_UPDATE: g5148.t1, single gene model update, valid-1, status:[pasa:asmbl_71,status:3], valid-1 NODE_1020_length_14634_cov_56.2425 . gene 4707 6142 . + . ID=g5148;Name=g5148.t1 NODE_1020_length_14634_cov_56.2425 . mRNA 4707 6142 . + . ID=g5148.t1;Parent=g5148;Name=g5148.t1 NODE_1020_length_14634_cov_56.2425 . five_prime_UTR 4707 4960 . + . ID=g5148.t1.utr5p1;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . exon 4707 5246 . + . ID=g5148.t1.exon1;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . CDS 4961 5246 . + 0 ID=cds.g5148.t1;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . exon 5364 5684 . + . ID=g5148.t1.exon2;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . CDS 5364 5684 . + 2 ID=cds.g5148.t1;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . exon 5899 6142 . + . ID=g5148.t1.exon3;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . CDS 5899 6047 . + 2 ID=cds.g5148.t1;Parent=g5148.t1 NODE_1020_length_14634_cov_56.2425 . three_prime_UTR 6048 6142 . + . ID=g5148.t1.utr3p1;Parent=g5148.t1 #PROT g5148.t1 g5148 MEEGSIRSMVGSPGALSKYSAADIPTLVERKNISLRSSTITSITGANAGHTGGSTAGNARSHAGINSNLRLLDFQQLSRSRLKQVRSISGLMAGFALEGLVQINIVSDMHTPLLTAYGVVTAMLIGVNLFALMIATCLLPTLESTPITDAEDEEKAVSIESKFRKYIYMSWILSTGLGIFLFVVDMALIGWIQFYKFNPAAIGVTVVAVPTLFIVAIFGFRFYNMLIAIQLEAHKRALDRALGTDTSVIHV* # ORIGINAL: g5150.t1 original gene structure, not modified by PASA NODE_1020_length_14634_cov_56.2425 AUGUSTUS gene 9766 12437 . + . ID=g5150;Name=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS mRNA 9766 12437 . + . ID=g5150.t1;Parent=g5150;Name=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 9766 9814 . + . ID=g5150.t1.exon1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 9766 9814 . + 0 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 10109 10272 . + . ID=g5150.t1.exon2;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 10109 10272 . + 2 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 10471 10542 . + . ID=g5150.t1.exon3;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 10471 10542 . + 0 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 10892 11110 . + . ID=g5150.t1.exon4;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 10892 11110 . + 0 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 11379 11550 . + . ID=g5150.t1.exon5;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 11379 11550 . + 0 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 11722 12086 . + . ID=g5150.t1.exon6;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 11722 12086 . + 2 ID=cds.g5150.t1;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 12402 12437 . + . ID=g5150.t1.exon7;Parent=g5150.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 12402 12437 . + 0 ID=cds.g5150.t1;Parent=g5150.t1 #PROT g5150.t1 g5150 MGTPDAHVVTIDGHAQIVAASPDNADASAGALAGFARGCTRVIASVGKGSIAGTFAGMAEETAGYPLDIVKTRMQVATTSVSAVTVFRNLVQNEGWTAVFRGLSPPLIASAFVNGVLFGVFSNVEERLERGPTALLSDNVTPFVSGAAAGLAQSVITCPIDVVKNRLQVLGLGHGVGFDKSHANIGPVAVARSLVRQSGLSALYLGYTATLLRDIPGYAVFFGVYEGLKVLAGKTAAQQLNKLHEFTENHGGGHVDHVHAPTAADLHHSANPLLVILAGGFAGMAYHASTYPFDVAKTMIQISPVNEYKGVLDCMRTLSAKHGYSALFKGFGPTVVRAFPANAVGFLVYEATLKFLPS* # PASA_UPDATE: g5147.t1, single gene model update, valid-1, status:[pasa:asmbl_72,status:3], valid-1 NODE_1020_length_14634_cov_56.2425 . gene 759 4064 . - . ID=g5147;Name=g5147.t1 NODE_1020_length_14634_cov_56.2425 . mRNA 759 4064 . - . ID=g5147.t1;Parent=g5147;Name=g5147.t1 NODE_1020_length_14634_cov_56.2425 . five_prime_UTR 3935 4064 . - . ID=g5147.t1.utr5p1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 3901 4064 . - . ID=g5147.t1.exon1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 3901 3934 . - 0 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 3705 3764 . - . ID=g5147.t1.exon2;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 3705 3764 . - 2 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 3473 3555 . - . ID=g5147.t1.exon3;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 3473 3555 . - 2 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 3146 3293 . - . ID=g5147.t1.exon4;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 3146 3293 . - 0 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 2614 2838 . - . ID=g5147.t1.exon5;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 2614 2838 . - 2 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 2195 2388 . - . ID=g5147.t1.exon6;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 2195 2388 . - 2 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 1779 1975 . - . ID=g5147.t1.exon7;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 1779 1975 . - 0 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 1421 1586 . - . ID=g5147.t1.exon8;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 1421 1586 . - 1 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . exon 759 1144 . - . ID=g5147.t1.exon9;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . CDS 944 1144 . - 0 ID=cds.g5147.t1;Parent=g5147.t1 NODE_1020_length_14634_cov_56.2425 . three_prime_UTR 759 943 . - . ID=g5147.t1.utr3p1;Parent=g5147.t1 #PROT g5147.t1 g5147 MMGFKMFAKIFVIAAFCLAVTCGTPQVKSGDAEMDAIAALHDQLDTNDDGSVVPQESKEFLSRELHVKEHSVEMVRSEHNFHNFDTDKEDNNDFISVAELQRAWNSSKVRTWNVDTVADWLAYKLKMPQYVDTFRARGIDGKKLPLYALHKGALLKDIGVTNEEDRDTIIDKITLAVVFGEVDGDRNRLKDIVLAILVILVPATMFGLVRNTKGKKELDARMEQMRVSLEKAQKQADEYQKRLESSENEREKGTAAAVKAEKEKAHLQEHLQGEIEIAKAEAQRLAISRLASVEEENRLSLAEREVDQLREALKSAEERLTHYEKSSIGEGRLNPELCRWLQSTYHQEIKYYNERREVAEKRLRQANEEYLRVAKKKQSFLGSIRIAHGDGMDELQHRILTALSTVDKVKVEAEELILRWQRIEQLAGICVKDAI* # ORIGINAL: g5149.t1 original gene structure, not modified by PASA NODE_1020_length_14634_cov_56.2425 AUGUSTUS gene 6351 9068 . - . ID=g5149;Name=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS mRNA 6351 9068 . - . ID=g5149.t1;Parent=g5149;Name=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 8925 9068 . - . ID=g5149.t1.exon1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 8925 9068 . - 0 ID=cds.g5149.t1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 8440 8480 . - . ID=g5149.t1.exon2;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 8440 8480 . - 0 ID=cds.g5149.t1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 8100 8227 . - . ID=g5149.t1.exon3;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 8100 8227 . - 1 ID=cds.g5149.t1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 7783 7849 . - . ID=g5149.t1.exon4;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 7783 7849 . - 2 ID=cds.g5149.t1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 6547 7612 . - . ID=g5149.t1.exon5;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 6547 7612 . - 1 ID=cds.g5149.t1;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS exon 6351 6422 . - . ID=g5149.t1.exon6;Parent=g5149.t1 NODE_1020_length_14634_cov_56.2425 AUGUSTUS CDS 6351 6422 . - 0 ID=cds.g5149.t1;Parent=g5149.t1 #PROT g5149.t1 g5149 MADLKRMESSSLSMTLSVLQRIDPAVTQIVDKAGHVFLYQFDEPSKSWQRKEVEGSLFLFERSIVPTHGFVIMNRLNIENVVEYVTKDTQVRISDSYLLFRNAVGVIQGIFFYTPEERERLGKKMIELANALVAVSNSQSHPHPHPAHLAHAMSAPQTPSRAAHEYAPPGTPSGGNLGGSDIMRLLMNAAQRNKQQPTAYGAPSDPGYAQYPPSTPTRGYGGNVPPHAPQTPSGYPPPYPMDGMFGYNSQGMAPPLAHPSSHTGLPAMPLVVMPNAVPMPQHYSAPPNALGPQGQGQSVPQQSRPQQPQQSQQRQQQQPQQQKQQTQQQPQQQQQQQPQPKQQTQRPPQQVQQQQQQQQQQQQTQSQEDDDEEQQQSKRTRKRAQPKQLKFLQPQDEFASASLSAVRQSDAFSLVETSHSATSQGQSQQNGSPGHAENGTITGLMSPMDLQKLSLKDGGGASLKGQKLTRIQFRDNLVHLLESDDRFLDSLYRDYLRQQQAAQQQ* # PASA_UPDATE: g1471.t1, single gene model update, valid-1, status:[pasa:asmbl_5596,status:12],[pasa:asmbl_5597,status:12], valid-1 NODE_3121_length_4253_cov_34.3602 . gene 140 2053 . + . ID=g1471;Name=g1471.t1 NODE_3121_length_4253_cov_34.3602 . mRNA 140 2053 . + . ID=g1471.t1;Parent=g1471;Name=g1471.t1 NODE_3121_length_4253_cov_34.3602 . five_prime_UTR 140 141 . + . ID=g1471.t1.utr5p1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . exon 140 222 . + . ID=g1471.t1.exon1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . CDS 142 222 . + 0 ID=cds.g1471.t1;Parent=g1471.t1;5_prime_partial=true NODE_3121_length_4253_cov_34.3602 . exon 343 486 . + . ID=g1471.t1.exon2;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . CDS 343 486 . + 0 ID=cds.g1471.t1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . exon 832 926 . + . ID=g1471.t1.exon3;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . CDS 832 926 . + 0 ID=cds.g1471.t1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . exon 1171 1249 . + . ID=g1471.t1.exon4;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . CDS 1171 1249 . + 1 ID=cds.g1471.t1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . exon 1446 2053 . + . ID=g1471.t1.exon5;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . CDS 1446 1610 . + 0 ID=cds.g1471.t1;Parent=g1471.t1 NODE_3121_length_4253_cov_34.3602 . three_prime_UTR 1611 2053 . + . ID=g1471.t1.utr3p1;Parent=g1471.t1 #PROT g1471.t1 g1471 SVDAAELVYLEMHKKKRDEYARALADQITSREIIQSESAVAPAAFMDAVFTRPDAYVAHVQSERRAKARDFFTEQVTMMQSRKDEKAAKVAREREEMAQHLERVKEELRREFQANHHSAFEARRKIEDYWSVQVDVKKTTVKGDKVVDNMPTNYLQLRKPPTQRTPQQERQLWAFRRMVNAGLFFKA* # ORIGINAL: g1472.t1 original gene structure, not modified by PASA NODE_3121_length_4253_cov_34.3602 AUGUSTUS gene 2216 4131 . - . ID=g1472;Name=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS mRNA 2216 4131 . - . ID=g1472.t1;Parent=g1472;Name=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS exon 3951 4131 . - . ID=g1472.t1.exon1;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS CDS 3951 4131 . - 0 ID=cds.g1472.t1;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS exon 3439 3503 . - . ID=g1472.t1.exon2;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS CDS 3439 3503 . - 2 ID=cds.g1472.t1;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS exon 3070 3212 . - . ID=g1472.t1.exon3;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS CDS 3070 3212 . - 0 ID=cds.g1472.t1;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS exon 2752 2911 . - . ID=g1472.t1.exon4;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS CDS 2752 2911 . - 1 ID=cds.g1472.t1;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS exon 2216 2437 . - . ID=g1472.t1.exon5;Parent=g1472.t1 NODE_3121_length_4253_cov_34.3602 AUGUSTUS CDS 2216 2437 . - 0 ID=cds.g1472.t1;Parent=g1472.t1 #PROT g1472.t1 g1472 GFASRHSRGRLRISGGGAWDGRAACDGLADYSHIWLVFVFHENTNTAATVKAKVAPPRLNGVKVGLFSTRTPHRPNAIGLSLVRLDRVEGNVLHVSGLDLIDGTPILDIKPYIASYDAPPLGDECRHVTLVAAWVAASPAKQNRTFDGVVLSPQSRTQIEELVGANRLPLFATADEYAALVSEVLAYDVRSLHQRRTHASGDSTPDVATSQSPSSQSSPCGSDAVMQYKMRVGSASVAFRIDGRLVVVDSVAMTSP* # PASA_UPDATE: g149.t1, single gene model update, valid-1, status:[pasa:asmbl_4313,status:12], valid-1 NODE_2439_length_6266_cov_55.8008 . gene 153 6266 . - . ID=g149;Name=g149.t1 NODE_2439_length_6266_cov_55.8008 . mRNA 153 6266 . - . ID=g149.t1;Parent=g149;Name=g149.t1 NODE_2439_length_6266_cov_55.8008 . five_prime_UTR 6266 6266 . - . ID=g149.t1.utr5p1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 6127 6266 . - . ID=g149.t1.exon1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 6127 6265 . - 0 ID=cds.g149.t1;Parent=g149.t1;5_prime_partial=true NODE_2439_length_6266_cov_55.8008 . exon 5563 5856 . - . ID=g149.t1.exon2;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 5563 5856 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 4950 5333 . - . ID=g149.t1.exon3;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 4950 5333 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 4389 4733 . - . ID=g149.t1.exon4;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 4389 4733 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 3713 4054 . - . ID=g149.t1.exon5;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 3713 4054 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 3263 3559 . - . ID=g149.t1.exon6;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 3263 3559 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 2701 3093 . - . ID=g149.t1.exon7;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 2701 3093 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 2042 2371 . - . ID=g149.t1.exon8;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 2042 2371 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 1351 1686 . - . ID=g149.t1.exon9;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 1351 1686 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 802 1095 . - . ID=g149.t1.exon10;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 802 1095 . - 2 ID=cds.g149.t1;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . exon 153 539 . - . ID=g149.t1.exon11;Parent=g149.t1 NODE_2439_length_6266_cov_55.8008 . CDS 153 539 . - 2 ID=cds.g149.t1;Parent=g149.t1;3_prime_partial=true #PROT g149.t1 g149 NAAKFTYTVTGLRGTEVYVARVKAVSKFGGFISSPMTTPEITIDPTAPEFADGDVVVTPGRSNGDYIITVYLPLYNTTVVSYGNNYDKPTAAVTCPPGSQMRTPWDGTYVCAGLDGFTSYDVTVTVSTPGFSTPKKFTAKTLQGEVDWGASVAIVTPINSTSLQVVAAAPKKTNGNVVKLVTFVVANNVLALAPIVQKPSSGSSVGFPYKPMISGLKPYTMYSIIICAFTAADTSLDNIPVGATLTANANFTLRTSQAPESILYGRNLTHASAPIWGDSPLVTVTWTSTLSLTVRHASPQAANSDIKTITGKIYTDYTVTAQGTLYIGPIADGPTSTNNADTLVFTVGAAQFVPGQTLYLEITAIGSSDLSPTSIYSSSFHTDLAFEAPVYESDTITGQGITLRTDLSAAGTIVLSKVPLPKTTIFNVTDYIVKVYPNAKCLVDSANFAQFLSIPAASAGLPVRFNGLLPATQYCVTIDARYNADVVTVYYGVPSVTTLNGAPMFADGDVILTPGRNLKSFFVTVYMPLYNTTVVSYPGSKVDKPTAAVTCPVNSLMLASFPGTFVCTKLDAFTIYEITVNVSTAGLATQKNISVQTLRGEVDWGSSAIAGVVPIDSNTLQVSMAAPSKPNGNVVKLVTFALANGALAVAPIVQRNSSFGPSILFPLSFSIGGLRPSTMYSIIICAFTAADTSLDNIAVGATLTANANFTLRASQAPESILNGQNAVTKCGALVLNAGTIMVNGAGDDATNNYLSVKFTAPAILNANCAASYRLSFVPNSYTFDEKAGNFDVLAYRSDGNISQFVTNGVIRPGSVYNVTLQASNNESKMATLTQLITMPFRAAVWLPNPSIPSIDYTNVPAGFKLEWYAPDYPNGPLDRFIAEWYNTENVGTVYSANVSVGVDTYPSNAAKFTYTVTGLRGTEVYVARVKAVSKFGGFISSPVTTPEITIDPTAPEFADGDVVVTPGRSNGDYIITVYLPLYNTTVVSYGNNYDKPTATVACPPNSQLRSPWDGTYICTGLDGFTSYDITVTVSTPGFSTPKKFTAKTLQGEVDWGASAVAIVTPIDSTSLQVVAAAPKKTNGNVVKLVTFVVANNVLALAPIVQKPSSSSSVGFPYKPVISGLKPYTMYSIIICAFTAADTSLDNIPVGATLTANANYNLRASQAPGSILYGRNLTHAS # ORIGINAL: g3221.t1 original gene structure, not modified by PASA NODE_2365_length_6564_cov_81.3931 AUGUSTUS gene 4678 6529 . + . ID=g3221;Name=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS mRNA 4678 6529 . + . ID=g3221.t1;Parent=g3221;Name=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS exon 4678 5484 . + . ID=g3221.t1.exon1;Parent=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS CDS 4678 5484 . + 0 ID=cds.g3221.t1;Parent=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS exon 5643 5807 . + . ID=g3221.t1.exon2;Parent=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS CDS 5643 5807 . + 0 ID=cds.g3221.t1;Parent=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS exon 6062 6529 . + . ID=g3221.t1.exon3;Parent=g3221.t1 NODE_2365_length_6564_cov_81.3931 AUGUSTUS CDS 6062 6529 . + 0 ID=cds.g3221.t1;Parent=g3221.t1 #PROT g3221.t1 g3221 MGETLDEAAAGKMAVGKRHFRCDEYAAAVDCFQEALELVTVAHGELDRRCAEAYYFYGAALLASSRNEGIFGGAAAANAEDGDGESGEEDAAEEDAEDAPSVPAADASAGAEATKNANAATVGSSTADTSAADGGEADAGAKTEEAVENLQLAWENLECARVIYTREVEAATLGGREIEARDLRLHLAKVHLQLGELCLETESFEQAEDDFAKCVSLRTELLAADDRTLAESVYQLSLAQQFAGKTYAAVDSLTLAVATLTARKEKLAKIAAGVRVQSDGAGLVDVKGKGAASGAPSAVDATTPEDAVVEIKELDELAADLQARIDELREDQRNTASLLKAIRESAGMASTVGFGAATAPASSGSSAGASSAFGASATAVESSGFGPAVFGSSSFGSGGLSGAASGASAPINDIGGLIKRKVVPQRVDVTASGAVNPDGVVGSTPTVTASVDGMGKRKAEDAPECAVAPEKKLKTDIVA* # PASA_UPDATE: g3220.t1, single gene model update, valid-1, status:[pasa:asmbl_4146,status:12], valid-1 NODE_2365_length_6564_cov_81.3931 . gene 97 4212 . - . ID=g3220;Name=g3220.t1 NODE_2365_length_6564_cov_81.3931 . mRNA 97 4212 . - . ID=g3220.t1;Parent=g3220;Name=g3220.t1 NODE_2365_length_6564_cov_81.3931 . five_prime_UTR 4018 4212 . - . ID=g3220.t1.utr5p1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 3949 4212 . - . ID=g3220.t1.exon1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 3949 4017 . - 0 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 3725 3805 . - . ID=g3220.t1.exon2;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 3725 3805 . - 0 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 3114 3283 . - . ID=g3220.t1.exon3;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 3114 3283 . - 0 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 2740 2825 . - . ID=g3220.t1.exon4;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 2740 2825 . - 1 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 2225 2339 . - . ID=g3220.t1.exon5;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 2225 2339 . - 2 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 1748 1878 . - . ID=g3220.t1.exon6;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 1748 1878 . - 1 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 1348 1462 . - . ID=g3220.t1.exon7;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 1348 1462 . - 2 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 943 1027 . - . ID=g3220.t1.exon8;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 943 1027 . - 1 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 444 509 . - . ID=g3220.t1.exon9;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 444 509 . - 0 ID=cds.g3220.t1;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . exon 97 186 . - . ID=g3220.t1.exon10;Parent=g3220.t1 NODE_2365_length_6564_cov_81.3931 . CDS 97 186 . - 0 ID=cds.g3220.t1;Parent=g3220.t1;3_prime_partial=true #PROT g3220.t1 g3220 MSYLSTAAAVPERNQKGEVTMKKVKVRRYQAGKRPDYAPQDSDYDDDDVSNEPITEAVSFRQRPSHDAEILEVRRPRAQGDGGVSAVRESNVSDDEDEEDVEARRERVRQKALQRMREEEHEALDRSDDASAAEKEESESSEYETDSDDDEEGDDDVMVKPVFVRKSDRSTVKRAEDVEMEEQRRIEEEATRQVERKIEAHNLVAEIVKQDAELEQNARKVEDVDDNDEGFEEEEYEAWKVRELKRIKRDRDERVTLEKERAEVEKLRNMTDEERRRYDLLNPKDKQDKAKMKFLQKYYHKGAFFMDTEDEVYKRDYHAPTGEDLVNKELLPKVMQ # ORIGINAL: g12645.t1 original gene structure, not modified by PASA NODE_820_length_17331_cov_42.7677 AUGUSTUS gene 220 2637 . - . ID=g12645;Name=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS mRNA 220 2637 . - . ID=g12645.t1;Parent=g12645;Name=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 1186 2637 . - . ID=g12645.t1.exon1;Parent=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 1186 2637 . - 0 ID=cds.g12645.t1;Parent=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 826 995 . - . ID=g12645.t1.exon2;Parent=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 826 995 . - 0 ID=cds.g12645.t1;Parent=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 220 541 . - . ID=g12645.t1.exon3;Parent=g12645.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 220 541 . - 1 ID=cds.g12645.t1;Parent=g12645.t1 #PROT g12645.t1 g12645 MLTCPVPFPPNLPSTATSNPLTGDVQAKDRTVMDCLNNHPQIVQLTDTTAILKLADSLHRGQNPKEAAVAREFLQAWVDRSGLASVPATANKRDNNFYQALAQALYENSSPDMCTLLRNQVYEHSKTITTDQAALKKHKLIPSQDSMDGGVIHAKAIAIAHNIAIRIVFVTPPEFRDEGAGQSESVTIVSLANSRVADAPKREIGLSFDGEKYRLLVARVVEPSQNIEAPDASTTHSVSNVLRNNIPESTLEEAQERTMTIEDTEFRVSDLLDDANGIEIYGTFYKLRADPQQPEYCLWQRQGRNTSWEPTSRTIPMHAHAIDNAMDLTESTGRDALDTHKQVGSTGAGASHVTTARAQRRSNAVILEDLKKVLNGFDSLRHYMGGDDHVTGGHPAGGIQDDANQDDGLGEDSSSRLERTASIVVNAIRATNRLSEKNGGACDTRIAIIGNNGVGKSTAINNIIESTRSRDYNCERIELQEAENEYPYDTTSEQLPAEFVRDDSETAISLALYGKTGILPTSTKQATTATPIEIKRGKWQVFEVQLGYHTVQRAQTLFQAAKSMIEQNGFEDFLKFGLTDADMQHLFAILGCKPGSKTFFKLETLPTAVSDIRIPRHFANRLGKRHTYTVTGPWEACCEKVRAYLLK* # ORIGINAL: g12646.t1 original gene structure, not modified by PASA NODE_820_length_17331_cov_42.7677 AUGUSTUS gene 3840 5453 . - . ID=g12646;Name=g12646.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS mRNA 3840 5453 . - . ID=g12646.t1;Parent=g12646;Name=g12646.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 3840 5453 . - . ID=g12646.t1.exon1;Parent=g12646.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 3840 5453 . - 0 ID=cds.g12646.t1;Parent=g12646.t1 #PROT g12646.t1 g12646 MSTFAFRRGLSAVHGCLGHLPRGHLASSFRVSFAAPMMPSCIRYYSARMVPVGHLRPAVCIASRQVAQMRFMATGRKRPLRGMEGKEEARRQRERIRADYAVNAELAMKHQASGSNKALYDLEKKLLSEVREKFGMKDDPSEATVQNRRGANAVKHLQSVTGQLQPSEAVRVGSVLGALIDLEYALDTMTVTEAEADQFIARFYILGNGEMLAEVESILSRAWMKPVDDATLGTELVSQMEVLTRLNRILLVMKHPDTCYRAAQDFRSIGMPGKALHTLHVISEGARAHPPALLTLAKMYDAGEGMPADPAKAANYRVRARWLGALSGYRRISEYVISDRTASHTFHEDDRQRILEYDADGVFTEDAADSIRFLGERAEEGDALAHLVLGFKFMLGEDVDKSEELSFKHFLQAANAGLWKAEHNVACMYLSGTGTPKNPGEAIKYLERSAAKNHALSTIMLGVIHRHGMAGGKPDLQAAMAHFDSARLSRVKEEASVAETYRRLTSHDMAGKKTQPCYVHWAQLGSIDVSGEPDANK* # ORIGINAL: g12647.t1 original gene structure, not modified by PASA NODE_820_length_17331_cov_42.7677 AUGUSTUS gene 6241 10719 . + . ID=g12647;Name=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS mRNA 6241 10719 . + . ID=g12647.t1;Parent=g12647;Name=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 6241 6342 . + . ID=g12647.t1.exon1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 6241 6342 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 6520 6598 . + . ID=g12647.t1.exon2;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 6520 6598 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 6842 6990 . + . ID=g12647.t1.exon3;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 6842 6990 . + 2 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 7148 7216 . + . ID=g12647.t1.exon4;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 7148 7216 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 7583 7777 . + . ID=g12647.t1.exon5;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 7583 7777 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 8069 9686 . + . ID=g12647.t1.exon6;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 8069 9686 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 9982 10253 . + . ID=g12647.t1.exon7;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 9982 10253 . + 2 ID=cds.g12647.t1;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 10402 10719 . + . ID=g12647.t1.exon8;Parent=g12647.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 10402 10719 . + 0 ID=cds.g12647.t1;Parent=g12647.t1 #PROT g12647.t1 g12647 MGKKTKVGKGRRDKFYKLAKEAGYRSRAAFKLIQLNRKFNFLSTSRVLVDLCAAPGGWLQVASKYMPVSSVIIGVDLVPIKPIRNVITLCEDITTEKCRQSIRKEIKTWKADCVLHDGAPNVGLTWTADAYSQASLALMSLKLACELLNKDGWFITKVFRSRDYHSLMWVLNQLFKKVHATKPQASRNESAEIFVVCQGYLAPDKIDPKLLDARSVFSEVETPVRRIDPLHPEKAKKAKADGYADDERVLYHEASAAAFVSTEDPIKILSEVNKITFDDEESRIHLNHPLTTPEIVECCRDLRVLGKREVKNLLKWRTSMHDLMARLRKELGDDGSAAGSGKEDDDASSDVSEEDEDERIEREAREIKEEAEARKRREKKKAQKDRAKIRERLNLKMDIPNDVHEAVADETLFSLTSVTNNRALKRLADGAGEEAAARLNEPEEEDDADDESNSEGDEYDSDESTADAAEMDRALEEMYQDYKSRKNTRLEAQRAGKKAVAEDIGSDSDDDDNAREKGDGKYVPNLTRDVMDVEEVDGLTDDDSFASSSEEEEGAGDEDPENARGRHRVTARDTTGPNKLVVGAPDPKAAATKRAAMWFSQEMFADADEDIAADLKRAKASVDKKKKVPVTNGSATSTATAANGGAKRKRDGLDDGNAEAETSKKQKKKAASVLERPAKVEKRKRSILPSADEDDGYFEVVPMDKSDESEAGGDSDASEDGENAKKRHKLDPEALAIGAMMLSKKKKAELIDDAYNRYAYNDTRDLPDWFVEDEKKHIKPNVPVTKEMVAEYKARLRELDARPIKKVAEAKARKKFKASKKMERVKQQAEAISESSDLTGAQKARQIEKLYAKNAKTKRPELKVVVGRKNKTLASSGGRPQGVQGRYKMVDSRGKKELRALQRRTKAKGGRAAKKGGKAGGKSKKEKKESKRR* # ORIGINAL: g12648.t1 original gene structure, not modified by PASA NODE_820_length_17331_cov_42.7677 AUGUSTUS gene 12108 14279 . - . ID=g12648;Name=g12648.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS mRNA 12108 14279 . - . ID=g12648.t1;Parent=g12648;Name=g12648.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 12108 14279 . - . ID=g12648.t1.exon1;Parent=g12648.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 12108 14279 . - 0 ID=cds.g12648.t1;Parent=g12648.t1 #PROT g12648.t1 g12648 MSRVVPWRRLCPDTVAARMDEAMAAQLYLVHETGPTGFVLRAEDGAKFKVFLGDPHSCTCGSFMRDRELCVHILWVTLKRFRVPKENPIAFQQSLVEREIGEVLRGRHVRQPVQEKPRSARDPSKERAEVQKREITAEDVCPICQDELLSSAEPSVHCRFGCGNNAHVKCMKVWAEHQKSTGETTIRCPLCREDFGPFEDLQREYRNSSKRKTRAEREDLHLGIACAGCRSCPISGKCFRCCVCVEYHLCETCYEERFLHSQHPFETRQSPTGRWRPASRTAPEPALPDAMIRDLEQRELSDADYAALLQLDAPVAAVYKVPRSIIESFPMRAAVQSDCMGECRVCMDAVSVGQVIRRLPCSHEFHKVCIDNWLSTRRHTCPIDGLACYDPHSTAVFGGSTSAQSTQPNARARRRPQSQQQQQQQQQQQQQQQQGHAHEDASSFLGVSGLSALGQSGGLSRTAPQHDSSGVRPSASAASGGVIRGRPPPLQQRALASTRTMATADDVRDLIVGTGLALPPATTIREHSHIARATALMLSRGLHSSRAAAHPSSPPPQSSSSGGASGAIDLFVGSGVASMRGNPLPSVTPARRGSLAASGVRPPRPPTLRTASGVLPPIDTASSSHQSSSTHDPLGGLGDVALRGFAVSEDPSSTLSLSIERHQLAVASGGGGNGHRRASGVLRCAPLPRGSRLQSSSAIVGQMASSLSALSLGAVEGVGGSGQ* # ORIGINAL: g12649.t1 original gene structure, not modified by PASA NODE_820_length_17331_cov_42.7677 AUGUSTUS gene 15083 16761 . + . ID=g12649;Name=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS mRNA 15083 16761 . + . ID=g12649.t1;Parent=g12649;Name=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 15083 15092 . + . ID=g12649.t1.exon1;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 15083 15092 . + 0 ID=cds.g12649.t1;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 15330 15699 . + . ID=g12649.t1.exon2;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 15330 15699 . + 2 ID=cds.g12649.t1;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 16038 16159 . + . ID=g12649.t1.exon3;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 16038 16159 . + 1 ID=cds.g12649.t1;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS exon 16682 16761 . + . ID=g12649.t1.exon4;Parent=g12649.t1 NODE_820_length_17331_cov_42.7677 AUGUSTUS CDS 16682 16761 . + 2 ID=cds.g12649.t1;Parent=g12649.t1 #PROT g12649.t1 g12649 MADEYPGLQELLQLGVDELIALFPDVPTVPSTSSFNTGSHSAGQSPHPVPSSHSGRTTAPASHVGRSSAGGHGGGNRMTMSSEELRTFSVSQFNKPNMKRVKSMSGETALGVGDALSEADYFDMLCRACRGVLHDQDRAKLYEYIVTLPPSELQSKQEQCHEYLTDGNNVSVPAGLMKSLMSSKTKLVVAEVG* # ORIGINAL: g2037.t1 original gene structure, not modified by PASA NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS gene 9944 10219 . - . ID=g2037;Name=g2037.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS mRNA 9944 10219 . - . ID=g2037.t1;Parent=g2037;Name=g2037.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 9944 10219 . - . ID=g2037.t1.exon1;Parent=g2037.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 9944 10219 . - 0 ID=cds.g2037.t1;Parent=g2037.t1 #PROT g2037.t1 g2037 MEQKRAKTIDYEADYVAGDWESILAGKDEPAALFYVGLYYDSVKHGFVLAREAFQVAMDSGDTRACIVLAAYDRFYMGMKEAPARRLTLGT* # ORIGINAL: g2041.t1 original gene structure, not modified by PASA NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS gene 16945 18363 . + . ID=g2041;Name=g2041.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS mRNA 16945 18363 . + . ID=g2041.t1;Parent=g2041;Name=g2041.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 16945 17373 . + . ID=g2041.t1.exon1;Parent=g2041.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 16945 17373 . + 0 ID=cds.g2041.t1;Parent=g2041.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 17457 18363 . + . ID=g2041.t1.exon2;Parent=g2041.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 17457 18363 . + 0 ID=cds.g2041.t1;Parent=g2041.t1 #PROT g2041.t1 g2041 MNHAGKIEQVVKQELMIKRIVTAVKLNASSSQLSVPDVEHVAGFGRLDLVQWFHSNRSGWFTAAVMDEAAANDRLEILKWLHQNRTEGCSPNAMDRAAATGHLRVLQWLHENRTEGCTCEALNAAARNGHMNVVAWLMSNRVEPDRVELEAVYEIVAKYGSEKTFEWMTTWKPPLQIDSNRWYEIALANRNIRVVFPICQYLQTDPRSPDHFAKFNIAGWDWENLFMYLDFMHNSNATLTVDGQWTCVIDSVEAMKWFVQNGYPIDVASVLEATTSLDVAKYFLPEPPLADDDDDKHVDGEPLYETVTIRTATLDSDGPMCRAVATGNFELAAYYGRFRKINEEKLSVIAAAAAGRGEIDALEWLVFYAGGKCLQTGNVSAAAAGGGHLHVLKWLYERGAFVKYGRIFDVPAANGHMEVLKWLSGVLPPHDSDVLAPRSSRVDMT # ORIGINAL: g2039.t1 original gene structure, not modified by PASA NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS gene 15879 16106 . + . ID=g2039;Name=g2039.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS mRNA 15879 16106 . + . ID=g2039.t1;Parent=g2039;Name=g2039.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 15879 16106 . + . ID=g2039.t1.exon1;Parent=g2039.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 15879 16106 . + 0 ID=cds.g2039.t1;Parent=g2039.t1 #PROT g2039.t1 g2039 MISTEQKRKIAENVRTLYDFELCYIFDLIQMETTKYTKNTNGVFVNMNELSDELLLEIKEYIEKCKIEKAQADTL* # ORIGINAL: g2036.t1 original gene structure, not modified by PASA NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS gene 8934 9644 . - . ID=g2036;Name=g2036.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS mRNA 8934 9644 . - . ID=g2036.t1;Parent=g2036;Name=g2036.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 8934 9644 . - . ID=g2036.t1.exon1;Parent=g2036.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 8934 9644 . - 0 ID=cds.g2036.t1;Parent=g2036.t1 #PROT g2036.t1 g2036 MGDFLVAAVALIEFVMARQLQVDDTGTITVGSPLLLPFVADFEAYPFPSMHFWMASAISFYPFLAQTGRKWDDDAFMKWQNGLFKRAVDVGYLPAIPRYSDYKDLAEKVEMLKTGAAAGDVGCTIGLARYYLKGCGGLVQDFEKCENMMRALVDGKKRIERAAHVLDDIYRFSPTVRALPNRGTYLAKAKQNLLDGIKNGCDRCRALLEMWEGPNGDGCPIVYFPEDAKLYNSKLK* # PASA_UPDATE: g2038.t1, single gene model update, valid-1, status:[pasa:asmbl_9030,status:3], valid-1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . gene 10951 13051 . + . ID=g2038;Name=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . mRNA 10951 13051 . + . ID=g2038.t1;Parent=g2038;Name=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . five_prime_UTR 10951 11001 . + . ID=g2038.t1.utr5p1;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . exon 10951 11305 . + . ID=g2038.t1.exon1;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . CDS 11002 11305 . + 0 ID=cds.g2038.t1;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . exon 11784 11845 . + . ID=g2038.t1.exon2;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . CDS 11784 11845 . + 2 ID=cds.g2038.t1;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . exon 12138 13051 . + . ID=g2038.t1.exon3;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . CDS 12138 12887 . + 0 ID=cds.g2038.t1;Parent=g2038.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant . three_prime_UTR 12888 13051 . + . ID=g2038.t1.utr3p1;Parent=g2038.t1 #PROT g2038.t1 g2038 MGIHGSDMLGLVGLTVTLVLSCVVLQYVAIVNADAVTPALCTLSMTSTNESATVRVSGTSGSGGKLLVLDAGEKGTIWFNSSIDGVAVKSLIDSRVKTILEAQQPGNLTLQLAAKVEQLSQQIRNLETDNASLRATVETLSAIVLAPPISCKDILKSRSRAPSGVYQIVPVGGSAVNVYCDMDADGGGWTALIHPSVAGLPTTAPGVDPAQPGLSKILALNATWSATGTCPNCYGGAAYDTVNIARDRNESMLWSYLCGGTSCKVTGTFSWKNTLFAMEARFVAQVNGDNTALTMNGQSMAYVASPDGKVKTFSGNSVTCDSNRCGAGTWMFLQATPGTMRFSGDLLITVVGVSDGYSWGGSVMLSRLFVR* # ORIGINAL: g2040.t1 original gene structure, not modified by PASA NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS gene 16115 16486 . - . ID=g2040;Name=g2040.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS mRNA 16115 16486 . - . ID=g2040.t1;Parent=g2040;Name=g2040.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS exon 16115 16486 . - . ID=g2040.t1.exon1;Parent=g2040.t1 NODE_719_length_18687_cov_22.3409_potentialcontaminant AUGUSTUS CDS 16115 16486 . - 0 ID=cds.g2040.t1;Parent=g2040.t1 #PROT g2040.t1 g2040 MHLNIQAYVKIHMLAMRFAELLKFSSAWNPFLDLMKQIAHEDISKQSIVDVLPDHNAAILAKTAALFSTCLKRIGEYINDEECARPKSYTKEQQYEWEAPRREYNRLEQRLQEFFAPADGNVD* # PASA_UPDATE: g14432.t1, single gene model update, valid-1, status:[pasa:asmbl_2575,status:3], valid-1 NODE_176_length_33438_cov_41.7503 . gene 26498 28439 . + . ID=g14432;Name=g14432.t1 NODE_176_length_33438_cov_41.7503 . mRNA 26498 28439 . + . ID=g14432.t1;Parent=g14432;Name=g14432.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 26498 26548 . + . ID=g14432.t1.utr5p1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 26883 26885 . + . ID=g14432.t1.utr5p2;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . exon 26498 26548 . + . ID=g14432.t1.exon1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . exon 26883 26931 . + . ID=g14432.t1.exon2;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . CDS 26886 26931 . + 0 ID=cds.g14432.t1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . exon 27128 27333 . + . ID=g14432.t1.exon3;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . CDS 27128 27333 . + 2 ID=cds.g14432.t1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . exon 27598 27811 . + . ID=g14432.t1.exon4;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . CDS 27598 27811 . + 0 ID=cds.g14432.t1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . exon 28203 28439 . + . ID=g14432.t1.exon5;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . CDS 28203 28309 . + 2 ID=cds.g14432.t1;Parent=g14432.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 28310 28439 . + . ID=g14432.t1.utr3p1;Parent=g14432.t1 #PROT g14432.t1 g14432 MKTILSTRYVDIPENVKFEVSSRVIRVTGPRGSLTRNFRHLNVELKLVSKKRLRVDMWFGDRKQLACVRTICSHIENMMKGVIYGFLYKMRFVYAHFPINVNITENSTKVEIRNFLGEKQVRIVKMLDGVKIEQSTAQKDEIILSGNDLELVSRSAALINQSTLVRDKDIRKFLDGIYVSEKTTIVPIAN* # PASA_UPDATE: g14425.t1, single gene model update, valid-1, status:[pasa:asmbl_2571,status:12], valid-1 NODE_176_length_33438_cov_41.7503 . gene 528 8500 . + . ID=g14425;Name=g14425.t1 NODE_176_length_33438_cov_41.7503 . mRNA 528 8500 . + . ID=g14425.t1;Parent=g14425;Name=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 528 928 . + . ID=g14425.t1.exon1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 528 928 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 1273 1414 . + . ID=g14425.t1.exon2;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 1273 1414 . + 1 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 1717 1779 . + . ID=g14425.t1.exon3;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 1717 1779 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 1953 2213 . + . ID=g14425.t1.exon4;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 1953 2213 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 2570 2797 . + . ID=g14425.t1.exon5;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 2570 2797 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 2957 3157 . + . ID=g14425.t1.exon6;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 2957 3157 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 3301 3391 . + . ID=g14425.t1.exon7;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 3301 3391 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 3670 4432 . + . ID=g14425.t1.exon8;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 3670 4432 . + 2 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 4643 4730 . + . ID=g14425.t1.exon9;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 4643 4730 . + 1 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 4968 5433 . + . ID=g14425.t1.exon10;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 4968 5433 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 5782 6729 . + . ID=g14425.t1.exon11;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 5782 6729 . + 2 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 6967 7236 . + . ID=g14425.t1.exon12;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 6967 7236 . + 2 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 7475 7713 . + . ID=g14425.t1.exon13;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 7475 7713 . + 2 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . exon 7949 8500 . + . ID=g14425.t1.exon14;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . CDS 7949 8179 . + 0 ID=cds.g14425.t1;Parent=g14425.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 8180 8500 . + . ID=g14425.t1.utr3p1;Parent=g14425.t1 #PROT g14425.t1 g14425 MSESGATRAGTSAASTRRRRANSVVRMRGGPVRQIDDKSETGKLARARLKMQAEQIESLNAKTEEELQFLHSVRDFVRKRAELESDFSKKMRALVGTFVEQRSTPQTSGLSRLKRTRKTVRTSIDASTEAQEARMSEVWIRVLNQTDKFSSHRGALADKLLQAVAEHIENLDSKKTFVARKVVDLGKMLQDDLSSSYADVEDARREYATLEKITQACKGKYERKNLKRNQPKGFLSRKDPHAACMQALERYNSAAADSESARHRYLLRLAEANAHQKHYYEIQMSQLLNELDFDFFEAVRDAFLSYCNVEDDYITSTKLCLGEIRRSAGEIDRRREREAFLKENDSLFQTPEGVPFEPVHGGDDEPGEIVSSETSRRELQSIMRDLEIESYDVSKLVRKLQGAVKELKEATKRRRESMPDANDPAKDAVEDIELEHTRRQLDGAILRLAEIKAQIEKLVKAGVSKSNGSAPEEDIAADVHPDSPDLPRGVPSAIIMGSSTPTGGSISGAASHGKRRSFLGLMLPGTRVKSTGSMEIPREVLDRASALEDDGDSDGADDDDDWAADGARPRGGAATPTNLSRRTSNGSAASVPLHVGAAHLEVSGGNRTRAITTGAASQRPDGLGVPVSRARAATGGSYQQAPPSLWRRPSTESASHVSEAGDTLSEGAELSFAFAEPPSMLATQAAVGELGSSTESLAQYGAFDVVAPPRKSVVQYKYDGQLKHELALNAGDIVYVTGENTDGWCQGRTEEGGRTGVFPSSYVHAITFEEEQAILRRRAVAIPPGNSAVASVSAATARTGTPSAAIVADDSAAKALAAAVAAGEAERAQRARVEAAEKERKERERRESELKERQEREERERVEAEQKAAAERAAKEIELAAKAKAATAATTTASPSPGTDKARALYKYSARDAKELSLVAGAIVTITSRALEQYGWLEGTLDGKTGRFPLTYVKLFSADETPSPSAPAQQQQQQQTPTTARTPAKASGGDESGSSFGPPPPAEFSGAMELPPPPVDFVPQTSAGQAAGGRGRGASVGESVSSTSGRRLSGAGDASSGVEHPPVVKARRGSQVDPNELPPPGIVALNPFKRMDSNEALMQNQSVVLQAAYVMSPDAPSSVSYVRQSGAPTPGHTPGQPSGRHRTLSTDSNSTPVRAPPLSHSASTPIGRLAAAEDFRAGGEFPLPPPQFDMPSPATTPSKITLSSSGSYAKPGQGYTKVRALHDYIARTPNELTFRAGDVIDIVGDASIAGEGHIVGRLGNSDGLVSLSRVEAVMARGTTQQGVTPDDVHWSELVDLADREIFDTTTRVRALFEWDAYRPTELSFKAGDVLEIVSRKTGEVGWWEGRLHGRVGLFPITFVEGVANDLHIMSSVRLLRVKGDKQASLELLPVSRASLLSTDVYLLDVGRKVFIWIGSRANPLEKRNSHFALQHIRAERPQSYIGSTVVDEGREDDEFLAYIDHAR* # ORIGINAL: g14429.t1 original gene structure, not modified by PASA NODE_176_length_33438_cov_41.7503 AUGUSTUS gene 18785 20298 . - . ID=g14429;Name=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS mRNA 18785 20298 . - . ID=g14429.t1;Parent=g14429;Name=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 20059 20298 . - . ID=g14429.t1.exon1;Parent=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 20059 20298 . - 0 ID=cds.g14429.t1;Parent=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 19746 19957 . - . ID=g14429.t1.exon2;Parent=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 19746 19957 . - 0 ID=cds.g14429.t1;Parent=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 18785 19655 . - . ID=g14429.t1.exon3;Parent=g14429.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 18785 19655 . - 1 ID=cds.g14429.t1;Parent=g14429.t1 #PROT g14429.t1 g14429 MASEEKEGDWSPGSSEDSDDTDVEDELPRTKPKSSPGSRAGSSRAASSVSRVVYCDWEDCFWTGTKQSHLLRHYRIHTNERPFVCQYAGCGKAYFRKAHLNVHERSHTGDRPFRCEHEGCTHAFSNKIHLKRHVLIHEKEKPYKCAHVNCGEAFTKHSMLRKHEAVHTGLLPFACLVDGCGARFLVQSKLRRHEKFHARSYRCEDCGESYNKWSLLVRHRRDAHPSDRTCNICHKVFRTKDNLREHAQTHVEDRERFPCDECDKRYFSQTALDKHVRTVHSGERPFECLVDGCGKKFAHKQTLQKHVAKMHDPSKPPTPKAPRRKRSIASLISGIVPESKRAMKRRKLMEEQARADDDDDDDGSVSFGELDDDEESAEDNGDELDARDGGLSEGAGHVAGCTDPSDSHCRPPACLEDAGHVTAVSLGLMPEMTAASSVVG* # ORIGINAL: g14431.t1 original gene structure, not modified by PASA NODE_176_length_33438_cov_41.7503 AUGUSTUS gene 23646 25865 . - . ID=g14431;Name=g14431.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS mRNA 23646 25865 . - . ID=g14431.t1;Parent=g14431;Name=g14431.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 23646 25865 . - . ID=g14431.t1.exon1;Parent=g14431.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 23646 25865 . - 0 ID=cds.g14431.t1;Parent=g14431.t1 #PROT g14431.t1 g14431 MMARRQAPGVLKDIAKPSDGEVVEGLLCSLCMKQARSIADLQQHFATYHKDGANGPSSERGGGHVAEDEDGDAAVTRAHWEPDSSRSVCAERGCGKEFGLMARKTHCRKCGRIYCRDHCVITMKLNVNARPDPAGIPCRVCRVCFDSREGAQQEFGQSRNLMGLFKRTREEKNGRDDVETNKLIIRLEKLLDGGSGGGSTSAEEARGRSASVMSISGVPKGSRREYEKAVVAWKDDSSVRACPECGSSFGLLNRRHHCRLCGGVVCGKEACADMLSLVVARQLLDGDKVNMESASGDKARQQSGLRICATCRARVLRHGKQVRRDKQKPAAYLTLYARLSLARERIESLMPKYAELCERASSTRNAYAAADSREAMSVRQEIMQNFEVVDSASKRIAAIPTQEMARLQEHVEANKQANATKKEKEKEKGGSVSERMDPHELAKQLRRAAVDTRVCQAIRLAATGYMQDVIPRLEVLRPDRQQIDKIDQRQKAEHQQLHQQQQQLQQLQHQQQMENERGKEMKAEEERRRRAAEAEDRQRAERERERARALQQSGASFQRGSVDTSGIGRGGGAGRQQGGEGTQSRGHVRNASSPSGMGASHASQAAVRSPAASRVMSSAQHRGDSFDEDDTTPTTISSPTAPIKKFAASDSLFDNIANSPPPQRRTADGGLARSATVSAGTGHGRGGKSTGAAVHAQVLSEQRQNIVKFITQARREQRWEDVDILSKSLAEIDRELGKL* # ORIGINAL: g14426.t1 original gene structure, not modified by PASA NODE_176_length_33438_cov_41.7503 AUGUSTUS gene 8797 9616 . - . ID=g14426;Name=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS mRNA 8797 9616 . - . ID=g14426.t1;Parent=g14426;Name=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 9539 9616 . - . ID=g14426.t1.exon1;Parent=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 9539 9616 . - 0 ID=cds.g14426.t1;Parent=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 9258 9329 . - . ID=g14426.t1.exon2;Parent=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 9258 9329 . - 0 ID=cds.g14426.t1;Parent=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 8797 8985 . - . ID=g14426.t1.exon3;Parent=g14426.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 8797 8985 . - 0 ID=cds.g14426.t1;Parent=g14426.t1 #PROT g14426.t1 g14426 MPGVLDPEELGRDEGKTAAAAYSREHVSKKSLEEIEHSSNDKDVKSIHNKVTGIHALSKMSADTCIHPDGPSRVRRLSDGQDLRRRLHAYLRGAPPFGVVNISDVMRPHSPP* # PASA_UPDATE: g14430.t1, single gene model update, valid-1, status:[pasa:asmbl_2573,status:3], valid-1 NODE_176_length_33438_cov_41.7503 . gene 20625 22182 . + . ID=g14430;Name=g14430.t1 NODE_176_length_33438_cov_41.7503 . mRNA 20625 22182 . + . ID=g14430.t1;Parent=g14430;Name=g14430.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 20625 20680 . + . ID=g14430.t1.utr5p1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 21020 21040 . + . ID=g14430.t1.utr5p2;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 20625 20680 . + . ID=g14430.t1.exon1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 21020 21054 . + . ID=g14430.t1.exon2;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . CDS 21041 21054 . + 0 ID=cds.g14430.t1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 21181 21312 . + . ID=g14430.t1.exon3;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . CDS 21181 21312 . + 1 ID=cds.g14430.t1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 21459 21561 . + . ID=g14430.t1.exon4;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . CDS 21459 21561 . + 1 ID=cds.g14430.t1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 21678 21779 . + . ID=g14430.t1.exon5;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . CDS 21678 21779 . + 0 ID=cds.g14430.t1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . exon 22024 22182 . + . ID=g14430.t1.exon6;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . CDS 22024 22086 . + 0 ID=cds.g14430.t1;Parent=g14430.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 22087 22182 . + . ID=g14430.t1.utr3p1;Parent=g14430.t1 #PROT g14430.t1 g14430 MSAEGDVVPAAVAAGPMDVMTALQEVLKKALIADGLARGLHECAKALDKRQAHLCVLASSCTEPAYIKLVEALCAEHGINLIKVEDGKQLGEWVGLCKIDKEGKARKVVGCSCVVVKNYGETSEALNVLLEYFKNRQ* # ORIGINAL: g14433.t1 original gene structure, not modified by PASA NODE_176_length_33438_cov_41.7503 AUGUSTUS gene 29568 30605 . + . ID=g14433;Name=g14433.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS mRNA 29568 30605 . + . ID=g14433.t1;Parent=g14433;Name=g14433.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS exon 29568 30605 . + . ID=g14433.t1.exon1;Parent=g14433.t1 NODE_176_length_33438_cov_41.7503 AUGUSTUS CDS 29568 30605 . + 0 ID=cds.g14433.t1;Parent=g14433.t1 #PROT g14433.t1 g14433 MDAVEIFILDGGRAWRERLSLGDIKTPGIGVAEYVRNLKQALVRQDRNGSLFEYEFSFEASDVWSPLFVSCRMKLVGAGREGRALLLDRVRIAAAVCIKSDVMDFVGNLLTDVHAISSQLEQSREAHAAAMARLAESTKTLDDAVARVCDVESALYAKFVAVLNEKKRRIRELEASGASVRPPSSTNGLTNASVEDADADGGPAKRRRTTKANGTSARGGVAARGKKDVSNVRGGVPEDAIGTRDEHMTDVSDAPSESPHADPAALSSFHSTDSGLGLTAQSIHTQSLGDGAVPKSVVASTAARQSASARGGASSGGGGKAGIAPKGKGKGREPTMDEMLMELNG* # PASA_UPDATE: g14434.t1, single gene model update, valid-1, status:[pasa:asmbl_2570,status:12], valid-1 NODE_176_length_33438_cov_41.7503 . gene 30970 32984 . - . ID=g14434;Name=g14434.t1 NODE_176_length_33438_cov_41.7503 . mRNA 30970 32984 . - . ID=g14434.t1;Parent=g14434;Name=g14434.t1 NODE_176_length_33438_cov_41.7503 . exon 32695 32984 . - . ID=g14434.t1.exon1;Parent=g14434.t1 NODE_176_length_33438_cov_41.7503 . CDS 32695 32984 . - 0 ID=cds.g14434.t1;Parent=g14434.t1 NODE_176_length_33438_cov_41.7503 . exon 30970 32576 . - . ID=g14434.t1.exon2;Parent=g14434.t1 NODE_176_length_33438_cov_41.7503 . CDS 31130 32576 . - 1 ID=cds.g14434.t1;Parent=g14434.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 30970 31129 . - . ID=g14434.t1.utr3p1;Parent=g14434.t1 #PROT g14434.t1 g14434 MGDAVNITDEVDGLFAGDSSVASNSHPSHYGSIPRSAQLRFAGGEEDEDGPHAADDPTVAAMEDVGGTMADCVERVPSQPISRILMLSGTIFALEVGLSLETAYVIPLFAQLGVSERFSSLLFCMGPIFGLFVQPIMGNASDRSTFKWGRRRPFILAISIGMLLGMLLIPNGEWLGTRLGDSNSSHVRGIALCTLGVLLLDFSCDSIQGPCRAYLFDVLPPEQQELGNSVFGIVAGIASCIGYIAGGVDWGPVGRLLGTQLRTVYAVGFLIAAACTICTLVSVAERRPAACNDTRQLSINAREIPRDGEDLHDDQGERTRLLDAAAETHGVARPSVVATSLPAGEGAFSMKEILALLLHPPKPLVRICIVHFFGWLSLLSFVIFFTDYMGLLIYGGDPDAHEGTHERSRYEEGVRIGSLGLATFSFGSSIGSVSISRIVPRFGLRAPYFACYLCTFVGAGVISLTRSLYVAIPMCFLAGGVFCAICTMPYMCLLAYETARGSDGESNGLNVAVVNMMMFVAQLIVSFSMGNIIRAVGTVAFAMYSSSICAAVGAVATFFLVLDGDLRAFTDTAKKDLG* # PASA_UPDATE: g14427.t1, single gene model update, valid-1, status:[pasa:asmbl_2576,status:12], valid-1 NODE_176_length_33438_cov_41.7503 . gene 11986 16527 . - . ID=g14427;Name=g14427.t1 NODE_176_length_33438_cov_41.7503 . mRNA 11986 16527 . - . ID=g14427.t1;Parent=g14427;Name=g14427.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 16438 16527 . - . ID=g14427.t1.utr5p1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 16132 16527 . - . ID=g14427.t1.exon1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 16132 16437 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 15626 15837 . - . ID=g14427.t1.exon2;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 15626 15837 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 15232 15432 . - . ID=g14427.t1.exon3;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 15232 15432 . - 1 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 14958 15067 . - . ID=g14427.t1.exon4;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 14958 15067 . - 1 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 14668 14717 . - . ID=g14427.t1.exon5;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 14668 14717 . - 2 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 14392 14496 . - . ID=g14427.t1.exon6;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 14392 14496 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 14013 14121 . - . ID=g14427.t1.exon7;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 14013 14121 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 13538 13775 . - . ID=g14427.t1.exon8;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 13538 13775 . - 2 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 13276 13297 . - . ID=g14427.t1.exon9;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 13276 13297 . - 1 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 12978 13058 . - . ID=g14427.t1.exon10;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 12978 13058 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 12707 12747 . - . ID=g14427.t1.exon11;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 12707 12747 . - 0 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . exon 11986 12424 . - . ID=g14427.t1.exon12;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . CDS 12106 12424 . - 1 ID=cds.g14427.t1;Parent=g14427.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 11986 12105 . - . ID=g14427.t1.utr3p1;Parent=g14427.t1 #PROT g14427.t1 g14427 MAAARTLAVLLVVAIAVLGCSNAHQFHSRLEKINVVSIVHLEGTTPSSLPVTISADKATLFGTRELVSVAWSGVDAPTPNDWIAVYSPSNVNYSTTAPIKYKFAQASKTHLSTGAGSLSFDISNMRGDYAFVFYRNGIDKPVLAGLSPPVAFDNYNEPTQIRLALGLAPGSLTVSWSTRDAAAPVAKWGLSPQKYVHSAPAVTSTYERTEMCGGSASGVGWRDPGLTHTVVLDGLQASARYYYVVGDDKFGFSAERYFDAPPISRADHETDIIAYGDMGKEEDDGSTSWNWNEPPSINTTDRVIAELDATQLVLHIGDISYAVGYSAQWDVFFDMVEPVASRVPYMVGVGNHERDMPNSGSYYNGTDSGGECGVPYNHRLVMPREEGSGEDVAWYDFTFGNMHHIIMSTEHSFVRGSKQYDFIAKALTRTDRTKTPWVIFSGHRPMYIDSTNEDAPDGDQPVARLLRQHIEPMMLAAKVDLALWGHHHSYQRTCPVSMEACAANATGHTSKAIAGNPFFGEVYSGGYAAPIHCVIGMGGMSHSQNLRPTKPAWALVVNDDKYGYTRIRANATTLYMQFVGNVDGKLLDEFTIVKPAA* # PASA_UPDATE: g14428.t1, single gene model update, valid-1, status:[pasa:asmbl_2572,status:12], valid-1 NODE_176_length_33438_cov_41.7503 . gene 16985 18650 . + . ID=g14428;Name=g14428.t1 NODE_176_length_33438_cov_41.7503 . mRNA 16985 18650 . + . ID=g14428.t1;Parent=g14428;Name=g14428.t1 NODE_176_length_33438_cov_41.7503 . five_prime_UTR 16985 17042 . + . ID=g14428.t1.utr5p1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . exon 16985 17112 . + . ID=g14428.t1.exon1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . CDS 17043 17112 . + 0 ID=cds.g14428.t1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . exon 17218 17339 . + . ID=g14428.t1.exon2;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . CDS 17218 17339 . + 2 ID=cds.g14428.t1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . exon 17486 17638 . + . ID=g14428.t1.exon3;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . CDS 17486 17638 . + 0 ID=cds.g14428.t1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . exon 17758 18072 . + . ID=g14428.t1.exon4;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . CDS 17758 18072 . + 0 ID=cds.g14428.t1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . exon 18238 18650 . + . ID=g14428.t1.exon5;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . CDS 18238 18447 . + 0 ID=cds.g14428.t1;Parent=g14428.t1 NODE_176_length_33438_cov_41.7503 . three_prime_UTR 18448 18650 . + . ID=g14428.t1.utr3p1;Parent=g14428.t1 #PROT g14428.t1 g14428 MANKINLFASVALIAFAVAFSAPVREYGIDVPTAVTLARFAGAAYCKSDVLEAWNSPLLLTASPTFKTTKVVDVLLTQCQAFVGYDDANKYIAVSFRGTESSNLVNWIYNLDFAQMDFDYPDCTNCKVHSGFFSVYNSTVSAGIVKEILSLVAEKSGYTLYVTGHSLGGALASLCALDLVTVNKVPVTVYTYGEPRVGNAQFAAFYSATLPAAVRLVHSKDIVPHLPLVNMGFDHQPTEYWIQADQSTIKQCDHSNGEDKTCSDSVPLLETTVSDHLNYLNVTLSSTAC* # PASA_UPDATE: g9883.t1, single gene model update, valid-1, status:[pasa:asmbl_7749,status:12], valid-1 NODE_4956_length_1117_cov_43.7044 . gene 235 996 . - . ID=g9883;Name=g9883.t1 NODE_4956_length_1117_cov_43.7044 . mRNA 235 996 . - . ID=g9883.t1;Parent=g9883;Name=g9883.t1 NODE_4956_length_1117_cov_43.7044 . exon 787 996 . - . ID=g9883.t1.exon1;Parent=g9883.t1 NODE_4956_length_1117_cov_43.7044 . CDS 787 996 . - 0 ID=cds.g9883.t1;Parent=g9883.t1 NODE_4956_length_1117_cov_43.7044 . exon 235 315 . - . ID=g9883.t1.exon2;Parent=g9883.t1 NODE_4956_length_1117_cov_43.7044 . CDS 235 315 . - 0 ID=cds.g9883.t1;Parent=g9883.t1;3_prime_partial=true #PROT g9883.t1 g9883 MNIAQLKAGYQSFQRLEVRYLVEEEKMSLKKLAANANRVYQVILFFMSVGNGLSDVLHWKNPKKTVIFWICYSFIILNFQVWYLPAMLATYFLYRRQ # ORIGINAL: g14137.t1 original gene structure, not modified by PASA NODE_2010_length_8106_cov_43.2758 AUGUSTUS gene 640 1621 . + . ID=g14137;Name=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS mRNA 640 1621 . + . ID=g14137.t1;Parent=g14137;Name=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 640 659 . + . ID=g14137.t1.exon1;Parent=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 640 659 . + 0 ID=cds.g14137.t1;Parent=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 904 1208 . + . ID=g14137.t1.exon2;Parent=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 904 1208 . + 1 ID=cds.g14137.t1;Parent=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 1407 1621 . + . ID=g14137.t1.exon3;Parent=g14137.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 1407 1621 . + 2 ID=cds.g14137.t1;Parent=g14137.t1 #PROT g14137.t1 g14137 MREGEGRAHVVWLKFLESPDLKVRLGRLGNCGVKRLQALDRTNSAGIVNAIANKFEATLKRTETPNDPTIHTWEEIIVILSQFDMHYGKCLSEFRLHAVVDTASHKSCVVRMQASDPMKRGTTAGHLARVKAELRWQTGNGDEPSLPLWMRWCAGERREDRVQSRKGSIMNDVSQLSLC* # ORIGINAL: g14138.t1 original gene structure, not modified by PASA NODE_2010_length_8106_cov_43.2758 AUGUSTUS gene 1836 7689 . - . ID=g14138;Name=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS mRNA 1836 7689 . - . ID=g14138.t1;Parent=g14138;Name=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 7605 7689 . - . ID=g14138.t1.exon1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 7605 7689 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 7361 7421 . - . ID=g14138.t1.exon2;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 7361 7421 . - 2 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 7094 7210 . - . ID=g14138.t1.exon3;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 7094 7210 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 6612 6807 . - . ID=g14138.t1.exon4;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 6612 6807 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 6229 6317 . - . ID=g14138.t1.exon5;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 6229 6317 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 5990 6107 . - . ID=g14138.t1.exon6;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 5990 6107 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 5617 5748 . - . ID=g14138.t1.exon7;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 5617 5748 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 5333 5415 . - . ID=g14138.t1.exon8;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 5333 5415 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 4970 5086 . - . ID=g14138.t1.exon9;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 4970 5086 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 4647 4798 . - . ID=g14138.t1.exon10;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 4647 4798 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 4351 4438 . - . ID=g14138.t1.exon11;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 4351 4438 . - 2 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 4090 4179 . - . ID=g14138.t1.exon12;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 4090 4179 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 3706 3841 . - . ID=g14138.t1.exon13;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 3706 3841 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 3335 3441 . - . ID=g14138.t1.exon14;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 3335 3441 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 3046 3177 . - . ID=g14138.t1.exon15;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 3046 3177 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 2821 2887 . - . ID=g14138.t1.exon16;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 2821 2887 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 2507 2635 . - . ID=g14138.t1.exon17;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 2507 2635 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 2182 2291 . - . ID=g14138.t1.exon18;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 2182 2291 . - 0 ID=cds.g14138.t1;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS exon 1836 2058 . - . ID=g14138.t1.exon19;Parent=g14138.t1 NODE_2010_length_8106_cov_43.2758 AUGUSTUS CDS 1836 2058 . - 1 ID=cds.g14138.t1;Parent=g14138.t1 #PROT g14138.t1 g14138 MGRLTTLAVCTLNQWALDFDGNLRRILESIRIAKRLGAAYRLGPELEVCGYGCNDHFNENDTILHSFEVLAEILKSGLTSGILCDVGMPILHRDVRYNCRVVLLDGKIVMIRPKMALANDGNYRETRWFTPWQRVRHLEEYYLPRMLQEITGQVTVPFGDGVIATLDTCIGSETCEELFTPASPHIAMALNGVEIFTNGSGSHHELRKLDRRVDLIQSATTKAGGIYLYSNCRGCDGERVYYDGCSMVAINGKLVAQGEQFALAEVEVTTATVDLEEVRSQRASMSSLQFQAAGSAEYPRIHVKFSVTTPDFCARETAPLPRVRYHTPEEEISLGPACWLWDYLRRSRLQGFFVALSGGIDSCSTTCIVASMCRLVTAAAAAGDSTVIEDARRIAGEPATSSYVPTDPREFANRILHTCYMGSRNSSEETRLRAKYIAEKTGSYHLELRIDDAVSSMLGVFSFVTGKTPSFRVHGGTDTENLALQNLQARIRMVFAYLLAQLLPWVRGRYGGLLVLGSANVDESLRGYMTKYDCSSADINPIGGISKTDLRSFLRYCIDSFGWPELKEFLDAPPTAELEPITENYVQTDEGDMGMTYDELSVFGRLRKIGRFGPFSMFTKLIHTWGPSLSPRQVADKVKFFFRMYAINRHKMTTLTPSYHAESYGTDDNRFDLRQFLYNAAWSWQFRKIDDHATRLERCSTETPASAPAAESSLPSTGRVPAQSAEEASAHARAYLATHPQLE* # ORIGINAL: g10997.t1 original gene structure, not modified by PASA NODE_6579_length_542_cov_100.612 AUGUSTUS gene 2 542 . + . ID=g10997;Name=g10997.t1 NODE_6579_length_542_cov_100.612 AUGUSTUS mRNA 2 542 . + . ID=g10997.t1;Parent=g10997;Name=g10997.t1 NODE_6579_length_542_cov_100.612 AUGUSTUS exon 2 542 . + . ID=g10997.t1.exon1;Parent=g10997.t1 NODE_6579_length_542_cov_100.612 AUGUSTUS CDS 2 542 . + 2 ID=cds.g10997.t1;Parent=g10997.t1 #PROT g10997.t1 g10997 GLAPLIAQDNVNNSRFVMETVVMKSPNGQTVQVEALTTLYDAGSMAGTVKSALVTVSYAGIPFGNMVLPSIQIKANKPSSVVMDSPLTVFNNAVFALAAKSILAGNAVIWNFSGRITVTADYLPDMRLNLNKDVVIPGIDITANTAFDVVIVGGATAGILNTTVSQTFVTTSINQLQDI # ORIGINAL: g8184.t1 original gene structure, not modified by PASA NODE_3571_length_3188_cov_37.2909 AUGUSTUS gene 1802 2942 . - . ID=g8184;Name=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS mRNA 1802 2942 . - . ID=g8184.t1;Parent=g8184;Name=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS exon 2926 2942 . - . ID=g8184.t1.exon1;Parent=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS CDS 2926 2942 . - 0 ID=cds.g8184.t1;Parent=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS exon 2509 2626 . - . ID=g8184.t1.exon2;Parent=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS CDS 2509 2626 . - 1 ID=cds.g8184.t1;Parent=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS exon 1802 2278 . - . ID=g8184.t1.exon3;Parent=g8184.t1 NODE_3571_length_3188_cov_37.2909 AUGUSTUS CDS 1802 2278 . - 0 ID=cds.g8184.t1;Parent=g8184.t1 #PROT g8184.t1 g8184 MMDVLGYGRVDEGDVPSLLDSIVAGKLATQHYRGSAGLSKQEQCACAQKASEAEHALSSQSASTSSSSSSSSPQTQKKEQPSPSTAGPRRRSRINLTFVDPKGSVSTVEGVEGESVMEVAKGNGVDIEGACGGAMACSTCHVIFPGDVYAALPPASDEENDMLDMLAGEGVLTETSRLGCQVKLTQSLDGVKIALPAVRPNFE* # PASA_UPDATE: g8183.t1, single gene model update, valid-1, status:[pasa:asmbl_6233,status:12], valid-1 NODE_3571_length_3188_cov_37.2909 . gene 2 1179 . + . ID=g8183;Name=g8183.t1 NODE_3571_length_3188_cov_37.2909 . mRNA 2 1179 . + . ID=g8183.t1;Parent=g8183;Name=g8183.t1 NODE_3571_length_3188_cov_37.2909 . five_prime_UTR 2 2 . + . ID=g8183.t1.utr5p1;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . exon 2 203 . + . ID=g8183.t1.exon1;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . CDS 3 203 . + 0 ID=cds.g8183.t1;Parent=g8183.t1;5_prime_partial=true NODE_3571_length_3188_cov_37.2909 . exon 517 611 . + . ID=g8183.t1.exon2;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . CDS 517 611 . + 0 ID=cds.g8183.t1;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . exon 922 1179 . + . ID=g8183.t1.exon3;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . CDS 922 970 . + 1 ID=cds.g8183.t1;Parent=g8183.t1 NODE_3571_length_3188_cov_37.2909 . three_prime_UTR 971 1179 . + . ID=g8183.t1.utr3p1;Parent=g8183.t1 #PROT g8183.t1 g8183 PHPPPWIRFGPYFAEPVIAGLDPVSGEPFICSMDLIGCPNVTKDFVVIGTASEQLYGMCESLWEPDMEPEDLFETISQALLNAVDRDAISGWGAVVHIIEKDKITTRTLKGRMD* # ORIGINAL: g2361.t1 original gene structure, not modified by PASA NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS gene 317 9762 . - . ID=g2361;Name=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS mRNA 317 9762 . - . ID=g2361.t1;Parent=g2361;Name=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 8236 9762 . - . ID=g2361.t1.exon1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 8236 9762 . - 0 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 7564 8008 . - . ID=g2361.t1.exon2;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 7564 8008 . - 0 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 7284 7421 . - . ID=g2361.t1.exon3;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 7284 7421 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 6972 7109 . - . ID=g2361.t1.exon4;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 6972 7109 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 6714 6723 . - . ID=g2361.t1.exon5;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 6714 6723 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 6310 6416 . - . ID=g2361.t1.exon6;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 6310 6416 . - 1 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 6022 6162 . - . ID=g2361.t1.exon7;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 6022 6162 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 5633 5893 . - . ID=g2361.t1.exon8;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 5633 5893 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 5268 5405 . - . ID=g2361.t1.exon9;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 5268 5405 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 4636 4779 . - . ID=g2361.t1.exon10;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 4636 4779 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 4385 4519 . - . ID=g2361.t1.exon11;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 4385 4519 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 4141 4278 . - . ID=g2361.t1.exon12;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 4141 4278 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 3427 3558 . - . ID=g2361.t1.exon13;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 3427 3558 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 2659 2950 . - . ID=g2361.t1.exon14;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 2659 2950 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 2281 2339 . - . ID=g2361.t1.exon15;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 2281 2339 . - 1 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 1911 2012 . - . ID=g2361.t1.exon16;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 1911 2012 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 1236 1733 . - . ID=g2361.t1.exon17;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 1236 1733 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 724 967 . - . ID=g2361.t1.exon18;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 724 967 . - 2 ID=cds.g2361.t1;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS exon 317 524 . - . ID=g2361.t1.exon19;Parent=g2361.t1 NODE_1525_length_10724_cov_22.6498_potentialcontaminant AUGUSTUS CDS 317 524 . - 1 ID=cds.g2361.t1;Parent=g2361.t1 #PROT g2361.t1 g2361 MATTSFRAIVSLVSILSLAGTTLGQVQYNFTLWTLPGASNDGYTNAPVTFKLYGVTTTSAAFVVSNVMARSVNFTQSLAVDVGVVLRLSIVPNADDWRPERITVSSSTGTYDFKFAAADVLVDATATPKEVFACAIPPPPSNGAFSCPSTYASSSNNGCWLSCATGYTASTSSSAACSSATGVSWIGYANDNGVCNSNCNPPVPTGRCSYLNRAACRVPDICGPCFSSYGVQGDPVNSTSDSNVACTKYTISYNIKLTMSSATSAGTNLACTLSLVGNRLSDSSVPLNDLGTGSISTGQSFTYSIQSSFLAFETVRGMRIACTGVSNWWLPLYFEVSGYDGAVDDTPIRFPFATSDRLDVGTTYIFAAPLARTLANGKIACTTSLPGKTCPIVCNSGYAPAGGNGTGSVTLPSGTTMPFSTASINSAVCMPDCSAHNNSYCATLNRKPCGAVVNTCGPCTDGFDTSSRTGSIDGDSACVQFVNYNVKITTGTTTFKGPFYMTLFGDIGSTDETFVTSNGFAASSTFRGTLSGKYIGTNFLTIQFRFVGPPTTWDYWNGGHILLSYDTDDFWRFEAAPPSTTIKSDTTYTACNFPPKPLNGSFTCDSTLTTASGCSVTCNTPTYTATALASRVYTCRSDGSYRDSSLNSLNASQPFCQISNPCTVNGGGCGVNSVCTNLAPAVSTCGCTNSSFYSPTANGKNCALVNPCTSNNGGCGANSTCTFTGTGARTCACLSSEFQSATNDGKNCTAVTGVCGTFSTCAAGTGGKAICTCFAGYSSAFTNNTNCAPTNNCLRKNGGCGPNTTSMCTMTGPGLNWCQCLDGFISPNGTQRDCRAITMCEKNSTYCGENTICVNVDATSLRCNCIPGTIAVSPTRCRLRTPCDNANICGQSSTCEAIDTTKYSCKCIFDYISDFKNGSFCREPTGCDAVDPCGQYSQCKPNATNPRMAACTCHPGYVSDTKDGLGCRETTPCDGDVNPCGLFSKCSSPPSDNTKFTCDCDVGYVSDSGTAVKDCRLATFCDLNRAYCGAFSSCVSTDSLSGTCPCIGAAYLPNGDQRSCRVKTDCDDNPCFPEGIATCNVSSTNIFISTCSCRDGYIADQVARFCKVRDTCVSNTFVCGTNADCVFDKSALTASCGCRAGFRKVSAIDCEAIPTDNGGSGGSGGTGGNGGNGGGQNTPNGNGNGDSGSNGGSGGNAGTVGGTGSGGGSSVPLPMVGGAVGGVVVVAAVVAALIYRYRKNTANKSLPLWDDDAGRGIVIFENPVNVAKTRLASGKGAGGGFEMTPFGKRLDGSISTEGLLDEVHDEANERPYESLRHVTGTRESPYATLEEMRDSMAKGVAVDTQRKENPYATVAGDVPDTISPYASTKLHGDSESPYATVRKEDGGYAKIERPYASVAREGEEEGTDESGYAHVFRDPEVYRRAFETIVKHYASNARGDGVSRDSQMPRDERAYEAIDQVLRKMNSEGIPEIPRDHVTVQDLLGAGNFGDVHRGVLLQDEDAVNQAVTASGVVMHVAHGPRTVALKTLKETAKLVERAAFIDEAILMARLKHPNIVSLLGVVVRGGELTIVLEFMANGSLLDYLKDKEETLKRSALIAMARDIAAGMVVLESAKLVHR # PASA_UPDATE: g7645.t1, single gene model update, valid-1, status:[pasa:asmbl_2737,status:3], valid-1 NODE_1827_length_9042_cov_44.5535 . gene 3896 7711 . + . ID=g7645;Name=g7645.t1 NODE_1827_length_9042_cov_44.5535 . mRNA 3896 7711 . + . ID=g7645.t1;Parent=g7645;Name=g7645.t1 NODE_1827_length_9042_cov_44.5535 . five_prime_UTR 3896 4018 . + . ID=g7645.t1.utr5p1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 3896 4279 . + . ID=g7645.t1.exon1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 4019 4279 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 4369 4446 . + . ID=g7645.t1.exon2;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 4369 4446 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 4567 4726 . + . ID=g7645.t1.exon3;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 4567 4726 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 4851 4947 . + . ID=g7645.t1.exon4;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 4851 4947 . + 2 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 5076 5149 . + . ID=g7645.t1.exon5;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 5076 5149 . + 1 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 5258 5445 . + . ID=g7645.t1.exon6;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 5258 5445 . + 2 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 5521 5592 . + . ID=g7645.t1.exon7;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 5521 5592 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 5705 5857 . + . ID=g7645.t1.exon8;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 5705 5857 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 5984 6239 . + . ID=g7645.t1.exon9;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 5984 6239 . + 0 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . exon 6417 7711 . + . ID=g7645.t1.exon10;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . CDS 6417 6559 . + 2 ID=cds.g7645.t1;Parent=g7645.t1 NODE_1827_length_9042_cov_44.5535 . three_prime_UTR 6560 7711 . + . ID=g7645.t1.utr3p1;Parent=g7645.t1 #PROT g7645.t1 g7645 MRGNEYSQLHAQDGYNHGADGNGAGRLREARHRHAFWMLFALVCGFDTLFSFLLFVVIGHDYTGGLSGYFKATVVHYSFRSSVFDVVIISLARSFLLSAFYWYLNHGKGKLVLITTLLSSVFLIIKVFYYSFSNGIPSYIMFVTAFIMPWVESWLWAVKIWWDERRAIEAADNATHPLKRYDETTPLIAGPGYSQPTQRWSSRRMEGVSVHSTPIGTPFGTPPETSQSFFGDDVVTDADANGYVAGPSQGPLHNQHMHSHAVQQQQGRPQHIQRALTPRDLKYIAEVREALDLLRTLGSSFDGWKLEKEADGVLVHSRPSPGVKLFRSTAIVEMSPRAVFEMVYYNIESQPNWNKAMTEYRTIETINDITDITYAMAAEAAGGMVSPRDFVNIRQWRLCEDGTYLCGGTGTTHERCPERQGITRGLNGPGGFVLLPVKERPGCTQFVWVVNSDIKGWLPKYVVDQAMTGVIIAFNGMLQSHVQSLAEGKVAAQ* # PASA_UPDATE: g7647.t1, single gene model update, valid-1, status:[pasa:asmbl_2736,status:12], valid-1 NODE_1827_length_9042_cov_44.5535 . gene 8345 8751 . + . ID=g7647;Name=g7647.t1 NODE_1827_length_9042_cov_44.5535 . mRNA 8345 8751 . + . ID=g7647.t1;Parent=g7647;Name=g7647.t1 NODE_1827_length_9042_cov_44.5535 . five_prime_UTR 8345 8541 . + . ID=g7647.t1.utr5p1;Parent=g7647.t1 NODE_1827_length_9042_cov_44.5535 . exon 8345 8751 . + . ID=g7647.t1.exon1;Parent=g7647.t1 NODE_1827_length_9042_cov_44.5535 . CDS 8542 8751 . + 0 ID=cds.g7647.t1;Parent=g7647.t1 #PROT g7647.t1 g7647 MELRVGNKYRLVRKIGSGSFGDIYLGTNIMNGEDVAIKLEPLKARHPQLMYESRLYKILYGGVGIPHVR* # ORIGINAL: g7644.t1 original gene structure, not modified by PASA NODE_1827_length_9042_cov_44.5535 AUGUSTUS gene 859 3018 . - . ID=g7644;Name=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS mRNA 859 3018 . - . ID=g7644.t1;Parent=g7644;Name=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 2886 3018 . - . ID=g7644.t1.exon1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 2886 3018 . - 0 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 2521 2770 . - . ID=g7644.t1.exon2;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 2521 2770 . - 2 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 2400 2434 . - . ID=g7644.t1.exon3;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 2400 2434 . - 1 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 1724 2244 . - . ID=g7644.t1.exon4;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 1724 2244 . - 2 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 1473 1607 . - . ID=g7644.t1.exon5;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 1473 1607 . - 0 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 1178 1279 . - . ID=g7644.t1.exon6;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 1178 1279 . - 0 ID=cds.g7644.t1;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS exon 859 1029 . - . ID=g7644.t1.exon7;Parent=g7644.t1 NODE_1827_length_9042_cov_44.5535 AUGUSTUS CDS 859 1029 . - 0 ID=cds.g7644.t1;Parent=g7644.t1 #PROT g7644.t1 g7644 MANFSFLGYVRTDAEAQVIFRAAREGRCRIVNRLTHVEQGRITPGVGYVYNPNESGIKRWTDGHKWGDSFHPGGNTRIYKEIMYAADADGRSVKVEKSAGLRKKTVGDTAISGDDQLRLVCYYREGEIDAYGPLTMIANETLPKSRRSSAASSPATTPRLRGVGVDGRSACSSPTGIPASSLAQALRVQLGSRETTFAVPEVPPHMEQGQGAHVHARVENHEPQSVQSRQTQSHSTANSPLSDGDDGSGKDGDASQDPIHQLLLAAAAAEGGQLAAAGFNRAVGAAPASRMIVQHHQHRHVQAGAHAQQQHGMHKFHPGQYAQQHSGMPMGYPSDRFFVPTSSMVMTPPHTPNLSPVSHAAHSAGPDAARLGPLYMPYQNYETKKATAWPHSDANGRFASHMFAPYPKPALHGVHAHAHAHARNPAIIRPKPLRAGLQSAMSDAHGTL* # ORIGINAL: g7646.t1 original gene structure, not modified by PASA NODE_1827_length_9042_cov_44.5535 . gene 6705 7711 . - . ID=g7646;Name=g7646.t1 NODE_1827_length_9042_cov_44.5535 . mRNA 6705 7711 . - . ID=g7646.t1;Parent=g7646;Name=g7646.t1 NODE_1827_length_9042_cov_44.5535 . five_prime_UTR 7697 7711 . - . ID=g7646.t1.utr5p1;Parent=g7646.t1 NODE_1827_length_9042_cov_44.5535 . exon 6705 7711 . - . ID=g7646.t1.exon1;Parent=g7646.t1 NODE_1827_length_9042_cov_44.5535 . CDS 6752 7696 . - 0 ID=cds.g7646.t1;Parent=g7646.t1 NODE_1827_length_9042_cov_44.5535 . three_prime_UTR 6705 6751 . - . ID=g7646.t1.utr3p1;Parent=g7646.t1 #PROT g7646.t1 g7646 MRAQKDEKFNFAAKATQVSLCRCSLYIDVRLGLGGRPQSHSLLCGSDAHTVSRMSLVAGRHVPHCGGGMAHSFSQPNLSSLQHEYAYTHAVFNDASPEAQHFWDAGERIPTAFPPHIGWARDEAHVSDLIQDGRQESFYEDVDAVVGNSMDANWREREWEQRQLAGSGGDGHMGWLNLHLSPVTRMRMGKAALREGRRLWVAGKDARQSPRSHKGRRSHDVGDTFKHNRELHVSKRRGCLSMNYRLSDESLESSPQDAGHLSASGTASLADLGTVNDGADMAMVECDSLDRYASLRRSRRWQSCPHLDELAMCM* # ORIGINAL: g10990.t1 original gene structure, not modified by PASA NODE_602_length_20352_cov_40.3773 AUGUSTUS gene 10700 11855 . + . ID=g10990;Name=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS mRNA 10700 11855 . + . ID=g10990.t1;Parent=g10990;Name=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 10700 10784 . + . ID=g10990.t1.exon1;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 10700 10784 . + 0 ID=cds.g10990.t1;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 11103 11269 . + . ID=g10990.t1.exon2;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 11103 11269 . + 2 ID=cds.g10990.t1;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 11430 11554 . + . ID=g10990.t1.exon3;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 11430 11554 . + 0 ID=cds.g10990.t1;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 11684 11855 . + . ID=g10990.t1.exon4;Parent=g10990.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 11684 11855 . + 1 ID=cds.g10990.t1;Parent=g10990.t1 #PROT g10990.t1 g10990 MKPKFEIYHSKLMYSTCLKQAMNDEFYKVCGLPDTYQSWFTVTSLHVYLYLLRMKTEGEESQSTRHALYLMYFEDVEQRMRLTGVSSGSVVADTLKELNSMFYGMLISLDEGIIHDDAVLAGALWRNMFRMAGKPADVEILTRYVRREIQRMDSIEYKYVLIGRVPFGPLRETEESERDTQR* # PASA_UPDATE: g10988.t2, single gene model update, valid-1, status:[pasa:asmbl_8439,status:3], valid-1 # ORIGINAL: g10988.t1 original gene structure, not modified by PASA NODE_602_length_20352_cov_40.3773 . gene 2327 4604 . + . ID=g10988;Name=g10988.t2 NODE_602_length_20352_cov_40.3773 . mRNA 2327 4604 . + . ID=g10988.t2;Parent=g10988;Name=g10988.t2 NODE_602_length_20352_cov_40.3773 . five_prime_UTR 2327 2378 . + . ID=g10988.t2.utr5p1;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . exon 2327 2503 . + . ID=g10988.t2.exon1;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . CDS 2379 2503 . + 0 ID=cds.g10988.t2;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . exon 2888 3047 . + . ID=g10988.t2.exon2;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . CDS 2888 3047 . + 1 ID=cds.g10988.t2;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . exon 3246 4604 . + . ID=g10988.t2.exon3;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . CDS 3246 3692 . + 0 ID=cds.g10988.t2;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . three_prime_UTR 3693 4604 . + . ID=g10988.t2.utr3p1;Parent=g10988.t2 NODE_602_length_20352_cov_40.3773 . mRNA 2379 3692 . + . ID=g10988.t1;Parent=g10988;Name=g10988.t2 NODE_602_length_20352_cov_40.3773 . exon 2379 2503 . + . ID=g10988.t1.exon1;Parent=g10988.t1 NODE_602_length_20352_cov_40.3773 . CDS 2379 2503 . + 0 ID=cds.g10988.t1;Parent=g10988.t1 NODE_602_length_20352_cov_40.3773 . exon 2888 3047 . + . ID=g10988.t1.exon2;Parent=g10988.t1 NODE_602_length_20352_cov_40.3773 . CDS 2888 3047 . + 1 ID=cds.g10988.t1;Parent=g10988.t1 NODE_602_length_20352_cov_40.3773 . exon 3249 3692 . + . ID=g10988.t1.exon3;Parent=g10988.t1 NODE_602_length_20352_cov_40.3773 . CDS 3249 3692 . + 0 ID=cds.g10988.t1;Parent=g10988.t1 #PROT g10988.t2 g10988 MSEREEAVYKAKLAEQAERYDDMAEAMKVVVKLNVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKENDDKKLVRVKEYRNKIETELKNICNQDVLTLLDKHLIPSSVNPESKVFYLKMKGDYFRYLAEFSSGGDRDKITKDSQEAYQSAFDIASKEMAPTHPIRLGLALNFSVFYYEIQNSPDRACQLAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDAQGADGEDDAP* #PROT g10988.t1 g10988 MSEREEAVYKAKLAEQAERYDDMAEAMKVVVKLNVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKENDDKKLVRVKEYRNKIETELKNICNDVLTLLDKHLIPSSVNPESKVFYLKMKGDYFRYLAEFSSGGDRDKITKDSQEAYQSAFDIASKEMAPTHPIRLGLALNFSVFYYEIQNSPDRACQLAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDAQGADGEDDAP* # ORIGINAL: g10992.t1 original gene structure, not modified by PASA NODE_602_length_20352_cov_40.3773 AUGUSTUS gene 20047 20352 . + . ID=g10992;Name=g10992.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS mRNA 20047 20352 . + . ID=g10992.t1;Parent=g10992;Name=g10992.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 20047 20352 . + . ID=g10992.t1.exon1;Parent=g10992.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 20047 20352 . + 0 ID=cds.g10992.t1;Parent=g10992.t1 #PROT g10992.t1 g10992 MRAALLIALLGLAIGAMAMPVANPEHESGIDRRAQPPPPPNGGGGGGHPPPQAGGVSASNGPKPSGSVPPPPKSDGPKPSGSVPPPPKSEGPKPSGSVPPPP # PASA_UPDATE: g10987.t1, single gene model update, valid-1, status:[pasa:asmbl_8438,status:12], valid-1 NODE_602_length_20352_cov_40.3773 . gene 126 1650 . + . ID=g10987;Name=g10987.t1 NODE_602_length_20352_cov_40.3773 . mRNA 126 1650 . + . ID=g10987.t1;Parent=g10987;Name=g10987.t1 NODE_602_length_20352_cov_40.3773 . five_prime_UTR 126 127 . + . ID=g10987.t1.utr5p1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . exon 126 277 . + . ID=g10987.t1.exon1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . CDS 128 277 . + 0 ID=cds.g10987.t1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . exon 478 615 . + . ID=g10987.t1.exon2;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . CDS 478 615 . + 0 ID=cds.g10987.t1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . exon 869 995 . + . ID=g10987.t1.exon3;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . CDS 869 995 . + 0 ID=cds.g10987.t1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . exon 1165 1304 . + . ID=g10987.t1.exon4;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . CDS 1165 1304 . + 2 ID=cds.g10987.t1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . exon 1436 1650 . + . ID=g10987.t1.exon5;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . CDS 1436 1552 . + 0 ID=cds.g10987.t1;Parent=g10987.t1 NODE_602_length_20352_cov_40.3773 . three_prime_UTR 1553 1650 . + . ID=g10987.t1.utr3p1;Parent=g10987.t1 #PROT g10987.t1 g10987 MAQVDQYLFQNNYPIDMRRKVQDYYEHRYANKRMYDEKTILDDMSPCLRKELALLKCADLVKAVPFLQQGSKSFVTAIVSALQFHVYMPGDWIVEEDTTGQEMFFIRKGTVEVFRLADEEDPLHPQNIVTISEGAFFGEIALLSSNLRRSASVRAKVACDMYTLSKSDLQAILVDYPEMGRYLKKVAEERLQNMGSMVEDDLHLVDMHAETVHPPPAVPSLLK* # ORIGINAL: g10991.t1 original gene structure, not modified by PASA NODE_602_length_20352_cov_40.3773 AUGUSTUS gene 13214 18154 . - . ID=g10991;Name=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS mRNA 13214 18154 . - . ID=g10991.t1;Parent=g10991;Name=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 18032 18154 . - . ID=g10991.t1.exon1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 18032 18154 . - 0 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 17682 17883 . - . ID=g10991.t1.exon2;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 17682 17883 . - 0 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 17458 17532 . - . ID=g10991.t1.exon3;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 17458 17532 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 17015 17249 . - . ID=g10991.t1.exon4;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 17015 17249 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 16017 16766 . - . ID=g10991.t1.exon5;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 16017 16766 . - 1 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 15643 15737 . - . ID=g10991.t1.exon6;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 15643 15737 . - 1 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 15195 15410 . - . ID=g10991.t1.exon7;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 15195 15410 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 14357 15058 . - . ID=g10991.t1.exon8;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 14357 15058 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 14064 14156 . - . ID=g10991.t1.exon9;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 14064 14156 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS exon 13214 13896 . - . ID=g10991.t1.exon10;Parent=g10991.t1 NODE_602_length_20352_cov_40.3773 AUGUSTUS CDS 13214 13896 . - 2 ID=cds.g10991.t1;Parent=g10991.t1 #PROT g10991.t1 g10991 MATAHRVRPRTAGDGHGLPSPSPSSRIKMYLEHHDIGALFEKLMSKLIHDMPEKPIPYLISSLRKTYERDLLAMGIREDSELDEALGRRRITEKEQRGLSISQLRSPSAVPQLPKISQGDLLRQRKFDRASDSIRATAVHASMVLPEPPKGGKPLSARKSLLVRPRSAAPIGRNAGDYMNIPDADDTASVTSGDSSIIIPVRPKTAMLPSLSRSSRPGSVVRNQGPSPHDDHDTRRPRSRSRSKSRHRSRSRSKSRAREQKVPTPPSEKHAHAHEQAHAHVDDTHASSSKAKERSKSRERAVDHAERGRSRSPKRHAETLHDVAVEEVKRSKSRSKSRSRSKSRSREEKKKEEASEQTAAAPVHRSLSRSRAPSVERPVSRAELIASVKAEEKVEEVKKEKKGGSKAGSKAGSRSHSPVLTSTKEVKEEKEEKKEKRSRSRSRSRSRAREAPVHEVLDPLDSHALIQRQQEERRRQLASMLESEVNRGHDDHHGDEGHGHVQERKQTQIGIDREIVKLAKNAHVTLSICARCAVTIEQEDVALLDDEGLDKVRKWLERQRQAAEKAEAIRVEEEVRNIIERAERSASESNSNSSDSDSDSDAHTHTHHRGDRSRKHHARSRSRSRSRSRSRSQSRRASGDHVTSHRERSRSRSRSRSRPKLANVEGEILDGVRRPSSRHNKRQEDSSEDCVGGHSGQDKHRSNSRSRSHRHRHDKTKRRKVVDFWQNVGDSDTTVTSAVTDSVTESDAPVRLARPKSESRRREELQMHDGRDYAGSPLRRTWKVADQSDDYTDSAATSDVYARTVDPTPSRLRSHLSPSSSSSSSSDSSSDEEEKPFWSSSNRPPSVIRTRPPSRNGGANNTPTHEHSSSQHGRPPSRSGADHSPASKSHNHNSHSRSHSRSHSRAGSPSHDSHPIYSLVGRIETTDDSDVPHGLRTSRTASSFPHTHNDDSDADVISIRPIAVTRLGSSSHTRDHVLSSSHAGLPTQSHAGVGSVSVLSVRPLRASTTGVYGHGGTAELHGRHHNLSQSTSFTAGIPVTIVKSRSASRAGNHEEFF* # PASA_UPDATE: g10989.t1, single gene model update, valid-1, status:[pasa:asmbl_8440,status:3], valid-1 NODE_602_length_20352_cov_40.3773 . gene 4925 9418 . + . ID=g10989;Name=g10989.t1 NODE_602_length_20352_cov_40.3773 . mRNA 4925 9418 . + . ID=g10989.t1;Parent=g10989;Name=g10989.t1 NODE_602_length_20352_cov_40.3773 . five_prime_UTR 4925 5067 . + . ID=g10989.t1.utr5p1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 4925 5084 . + . ID=g10989.t1.exon1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 5068 5084 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 5286 5463 . + . ID=g10989.t1.exon2;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 5286 5463 . + 1 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 5671 5822 . + . ID=g10989.t1.exon3;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 5671 5822 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 6082 6138 . + . ID=g10989.t1.exon4;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 6082 6138 . + 1 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 6533 6709 . + . ID=g10989.t1.exon5;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 6533 6709 . + 1 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 6900 7095 . + . ID=g10989.t1.exon6;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 6900 7095 . + 1 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 7391 7534 . + . ID=g10989.t1.exon7;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 7391 7534 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 7826 7924 . + . ID=g10989.t1.exon8;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 7826 7924 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 8124 8272 . + . ID=g10989.t1.exon9;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 8124 8272 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 8648 8792 . + . ID=g10989.t1.exon10;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 8648 8792 . + 1 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . exon 8939 9418 . + . ID=g10989.t1.exon11;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . CDS 8939 9112 . + 0 ID=cds.g10989.t1;Parent=g10989.t1 NODE_602_length_20352_cov_40.3773 . three_prime_UTR 9113 9418 . + . ID=g10989.t1.utr3p1;Parent=g10989.t1 #PROT g10989.t1 g10989 MATAAGRIAVIGLSTAACVGGALVYGTQIHTVSAEEHKKPASTAAAVQKSAPQAAPKQSAQDAPSAAAPPSVPTTTAPLRTAENYTALSGLNHRDLFKNHSIPEGYALELVQIVHRHGARTSARARFNNTHPCSWACGPHLAVHEVLPLEGRGLGDGASSFRTLHMPHRQAIKGTCFAGQLTPQGWKQLNELGRSLRATYVDRLGFLPTNGDDGHGNVANLVYVRSTSIRRAIESAQGLISGLFPPEKNNKTVDVNILQEHVENMYPGAVRCDRMKQLKQAFRETQESLAVAEAYAPIRDKISKALNIPAADLPSMHGLFDEFVCRDAHDVKLPEGITSEIVSELERLSNKHWFDMYRAHGELVRLGIGRFIGEMMHDMDASLRGEKRARFHVYSGHDTTVAPLLVGLGLLDHHWPAFASSITYEVMKSKSDGSRAVRVLYNGKPAALPACKDAAVTPDGTLCPYGRFVDIVSELVPKDFVGECAARSADPKPAA* # ORIGINAL: g4083.t1 original gene structure, not modified by PASA NODE_1969_length_8295_cov_61.1646 AUGUSTUS gene 1080 2547 . - . ID=g4083;Name=g4083.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS mRNA 1080 2547 . - . ID=g4083.t1;Parent=g4083;Name=g4083.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 2270 2547 . - . ID=g4083.t1.exon1;Parent=g4083.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 2270 2547 . - 0 ID=cds.g4083.t1;Parent=g4083.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 1080 2100 . - . ID=g4083.t1.exon2;Parent=g4083.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 1080 2100 . - 1 ID=cds.g4083.t1;Parent=g4083.t1 #PROT g4083.t1 g4083 MALLLRQQHLAMCGKRFLFTCLALSLFANVLQMLPSRPSPYLAESGHVSVADGAEVGDTNIDAAVRRDTASMRLTDTDAFEYETQSMLRHMKVYTYDISAYDRLPSPVDPKYAVEVLFRDTLRASAFHTDNPEEATLFYIPLRCSALRFRHKDRALGGEYAENVTRDCVEYIRSALPYFNRTAGADHFYTCTHDMGASVARLSPVEFRKNAIAVVNTADYADEYYVPHKDIALPPTMGYDRDSLSEEGKGGLGIDPARRTTLAFFAGTVQRGRVRPVVAAHWNGDPDIVIVSGHLQPSAYRRHLSESRYCLFLRGHRAWSPRIMDAVFYGCVPVLLSDHYDLPLQSLVDWGDISVMLTEAQVAQLKLILQGISDARLRSMQSAIARNYARFAWNRTPRPGDAFFSVMLTLWRRRHVVKFKPHPVNITPSADK* # ORIGINAL: g4084.t1 original gene structure, not modified by PASA NODE_1969_length_8295_cov_61.1646 AUGUSTUS gene 3316 8199 . + . ID=g4084;Name=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS mRNA 3316 8199 . + . ID=g4084.t1;Parent=g4084;Name=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 3316 3459 . + . ID=g4084.t1.exon1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 3316 3459 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 3623 3961 . + . ID=g4084.t1.exon2;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 3623 3961 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 4439 4591 . + . ID=g4084.t1.exon3;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 4439 4591 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 4952 5225 . + . ID=g4084.t1.exon4;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 4952 5225 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 5509 5699 . + . ID=g4084.t1.exon5;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 5509 5699 . + 2 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 6339 7175 . + . ID=g4084.t1.exon6;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 6339 7175 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 7498 7736 . + . ID=g4084.t1.exon7;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 7498 7736 . + 0 ID=cds.g4084.t1;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS exon 8034 8199 . + . ID=g4084.t1.exon8;Parent=g4084.t1 NODE_1969_length_8295_cov_61.1646 AUGUSTUS CDS 8034 8199 . + 1 ID=cds.g4084.t1;Parent=g4084.t1 #PROT g4084.t1 g4084 MASNVNPKELSKAVCAAVHNGILDEAPVLALAAVERANRSVALSALDKLYVDLRSVCGKPAKERTGPTVNLLSEIQMTVLVGYLNRFLDLFGFDRIASWYPDLLMFADCKERSLWHELELLMRDCAARDPAFVSLLVEYFVQTNSQNAVAIILTIDDSQATHLLSKLGDYMLRPQHRYLAIQLLSHIVKHGSTYLHRIVKLPLYSHLVSSLKYDFAPVTLAAGAMTMSMLLPSVCPLTRPQIVELHDVILRLRTWKVTVRTQRSVQSPTAGESAQYPPNASGQAPAAGVVPATAAAPDAWHVLEDPDVIFNADGEARPSDPALDLLERASAILFRQVYGLFPCNILRLLRDRYGERKLDEEFKAYVQPLLAQVQFHPLLVLSSASLEVEVSGWLRRDASEAAIVCSTITLDVAPLSPTSSTDTRSTDRAPFGADSTLSRPYPSHPGGSSAWSAADSGMHTTAIGGGGGSVLAKSDAELVQGGPSTWWSMHQMSYVSPADSPQASRPSSPATIAAAMSRADSPVVHSAQPDAHSVASVASHDGLASTPGSGPGTPPPMQGQLVSTPNNGVAGLGAPRDTPQSSRPESPAANAAQGDSGGVAGVRVTDPRPRTLRSMLEMQAFLGADQPNYAGPPTAKVRERSSSDDLVSSGSSRQQRPRTLPSGSAPATAGASQASSMHSSTSSLPPDLSDTDLASLQRHVITLRQELAFERHLREQHVMRIRGLHRDLQHLAAAKEERQAMEARLRSEISNYKRLSKLFEWQREANASLKETQSSWEGDLQ # PASA_UPDATE: g9407.t1, single gene model update, valid-1, status:[pasa:asmbl_7005,status:12], valid-1 NODE_4130_length_2144_cov_36.9483 . gene 290 2120 . - . ID=g9407;Name=g9407.t1 NODE_4130_length_2144_cov_36.9483 . mRNA 290 2120 . - . ID=g9407.t1;Parent=g9407;Name=g9407.t1 NODE_4130_length_2144_cov_36.9483 . five_prime_UTR 1908 2120 . - . ID=g9407.t1.utr5p1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . exon 1839 2120 . - . ID=g9407.t1.exon1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . CDS 1839 1907 . - 0 ID=cds.g9407.t1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . exon 1322 1644 . - . ID=g9407.t1.exon2;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . CDS 1322 1644 . - 0 ID=cds.g9407.t1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . exon 996 1149 . - . ID=g9407.t1.exon3;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . CDS 996 1149 . - 1 ID=cds.g9407.t1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . exon 800 865 . - . ID=g9407.t1.exon4;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . CDS 800 865 . - 0 ID=cds.g9407.t1;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . exon 290 438 . - . ID=g9407.t1.exon5;Parent=g9407.t1 NODE_4130_length_2144_cov_36.9483 . CDS 290 438 . - 0 ID=cds.g9407.t1;Parent=g9407.t1;3_prime_partial=true #PROT g9407.t1 g9407 MNSIVVFCHFCELHGPSILFCTQAFHSSQDPDATVAGLGPSEVASYFDGANHSTYSPTASESGSLATYALPHSTVTPFHSKSSTCESCRSLAPGVPGFLSNDHAAHISYISGQYPYNPDLYSAVRQACVRSLSCEVCPGREGPMLFGDDKNGFVFSYAFFIRDTQARGSQRWYSICLLMSDRVHLVNSWPFLAGSIRLVVDDLQAKANVTFQSDNAARNTNGRHGASGMAGGSNSGSNSGINSGGQFNLPPDQ # PASA_UPDATE: g8023.t1, single gene model update, valid-1, status:[pasa:asmbl_7442,status:3], valid-1 NODE_4563_length_1457_cov_32.0398 . gene 28 1170 . - . ID=g8023;Name=g8023.t1 NODE_4563_length_1457_cov_32.0398 . mRNA 28 1170 . - . ID=g8023.t1;Parent=g8023;Name=g8023.t1 NODE_4563_length_1457_cov_32.0398 . exon 1096 1170 . - . ID=g8023.t1.exon1;Parent=g8023.t1 NODE_4563_length_1457_cov_32.0398 . CDS 1096 1170 . - 0 ID=cds.g8023.t1;Parent=g8023.t1 NODE_4563_length_1457_cov_32.0398 . exon 28 811 . - . ID=g8023.t1.exon2;Parent=g8023.t1 NODE_4563_length_1457_cov_32.0398 . CDS 419 811 . - 0 ID=cds.g8023.t1;Parent=g8023.t1 NODE_4563_length_1457_cov_32.0398 . three_prime_UTR 28 418 . - . ID=g8023.t1.utr3p1;Parent=g8023.t1 #PROT g8023.t1 g8023 MREGEANGREYYFVSREDMQRDVVAGKFIEHGEYNGNLYGTTFETVRQCSETKRICILDIHPSSIVPLCNSEIGFVIVFVKPPSMDVLKKTRKETKETALRDLITHAEVIDSSFGGIFDASIVNTSPEQSVTELRAICDRLCTGTHWVSAGIMHT* # ORIGINAL: g11510.t1 original gene structure, not modified by PASA NODE_1857_length_8881_cov_46.1151 AUGUSTUS gene 563 1228 . - . ID=g11510;Name=g11510.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS mRNA 563 1228 . - . ID=g11510.t1;Parent=g11510;Name=g11510.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 563 1228 . - . ID=g11510.t1.exon1;Parent=g11510.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 563 1228 . - 0 ID=cds.g11510.t1;Parent=g11510.t1 #PROT g11510.t1 g11510 MVPLVTASASHVLQTISDQSARRFAARRRPAMGVERATWRLELAYATPILLGRDARAVRPDISVRCAVASAPQRAPRVVTDRREPACACRAPRTLTARDANSTAYAHLSATALWVQVVTDPVPPAPPMLLVFDATERVTAMEGSAMTDPVEVVSATPVQLDTMALGARRCARATGVSARRDQTATVTVRVVQQDNMAPGARSRARATEVLAVMDHPAQACA* # ORIGINAL: g11513.t1 original gene structure, not modified by PASA NODE_1857_length_8881_cov_46.1151 AUGUSTUS gene 2624 8881 . - . ID=g11513;Name=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS mRNA 2624 8881 . - . ID=g11513.t1;Parent=g11513;Name=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 8714 8881 . - . ID=g11513.t1.exon1;Parent=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 8714 8881 . - 0 ID=cds.g11513.t1;Parent=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 3428 8531 . - . ID=g11513.t1.exon2;Parent=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 3428 8531 . - 0 ID=cds.g11513.t1;Parent=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 2624 3291 . - . ID=g11513.t1.exon3;Parent=g11513.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 2624 3291 . - 2 ID=cds.g11513.t1;Parent=g11513.t1 #PROT g11513.t1 g11513 RLAMVAALALHRDARARRLGGREHLVTPAPLDTGELHARPATVSTVRHVARAAVEQCNCLNGATCSDGLSGTGACTCAANYFGTTCATFCLASTTCNGRGTCTGTGACLCTGNYAGANCETCASGYYGPTCTSQCNCLNGATCNQGISGTGACTCAVNYYGATCATNCVAATTCSGQGICNVATGACTCNSNYYGTSCATNCVPSSTCNGHGSCSGTGTCLCTGNYIGANCEACATTYYGSTCSSLCNCLNGATCNQGIGGTGACTCATNYYGTTCATNCVAATTCSGHGTCSASGLCTCATGWTGASCSSCAAGYWGASCTSCACLNGGTCNEGIGGTGACTCAANYYGATCATNCVAATTCSGRGTCNPSTGACSCTAVGWTGANCNTCASGYWGASCAACNCLNGATCNQGISGTGACTCAANYYGTTCAVNCVAATTCSGQGTCNVATGACTCSANYYGSNCGTFCLADSTCNGKGTCDAGTGTCQCSVGWTGVTCNACATNYYGPSCTFCLASTTCNGRGSCSGTGTCSCNTGWAGANCDVCDVGYYGPTCSSQCNCLNGASCSQGVSGTGACTCAANYYGTSCATYCLASTTCGGQGSCSINGACACNANYFGANCGTFCQASTTCSGQGTCNVAGACVCNANYYGANCGSYCLAATTCSGQGTCSAAGACVCNANYFGSNCGPFCLASTTCSSKGSCSNGGGCACDTGYYGSNCGTFCVASTTCNGRGTCTGAGACVCSGNYAGANCESCIAGYYGPTCTSQCNCLNGATCSQGISGTGACTCAVNYFGTTCGTFCLASTTCSGRGTCTGAGACACSGNFVGASCNACAANWYGPACSSQCTCLNGATCSQDITGTGACTCATNYYGTTCATFCLAPTTCSGQGSCSSGTGSCACNPNYFGSTCATYCLASTTCNGKGTCTAAGACVCSAGWMGANCDACSSNFYGSLCTPCNCLNGGTCSDGIGGTGACACAANYYGPTCAVHCLAASNCNGHGTCASADGSCTCATGWTGATCNVCAPGYYGSACTACACLNGATCSDGLSATGSCTCAANYYGATCGTYCLASATCSGKGSCLGTGLCSCNVGWAGLNCASCASGYYGSSCSSQCNCLNAATCSQGLSGTGSCACAANYFGASCGTFCLASSTCNGKGTCDGTTGNCVCATGWSGSSCNVCAAGYYGPSCASQCSCLNGATCSDGLGGNGACACAANYYGTNCGTLCVAASTCNGHGSCTASGTCACSTGWTGASCNSCAAGYYGALCSACECLNGATCSEGLAGTGACICAANYFGNKCETYCLGSITCNGKGSCTAAGTCTCSSGWTGAGCNACASGYWGASCSLCNCLNGATCSDGLSGTGACTCAANYFGTTCATFCLASTTCNGRGTCTGTGACLCTGNYAGANCETCASGYYGPTCTSQCNCLNGATCNQGISGTGACTCAANYYGTTCASNCVAATTCNGRGACTSDLGQCACTGNYAGTNCQTCTVGWFGPTCSSQCNCLNGATCSQGIGGTGACTCMPNYYGADCGTYCLAATTCNGHGACSAVGTCACATGWTGTNCDACATGYYGASCASQCDCLNGATCNQGISGDGKCACSTNYYGSKCAVFCAAASTCSGKGSCDANSGLCTCTGNYVGTSCAACRAGYFGPSCAACPVACATCNEGISGTGLCLSCPSGNLYGSRCESTCLCASAAQCSAGPNGDGACTACPSGKWGTRCESACNCNGGVCNEGPSGSGLCTSCPPNKYGPNLTVSAVTENASHARLIFMAPRALYRVIATEAVAIQAHRAMAAVFHAERTTTGPGVLLIASPRQRVVGAEAAIRARESVYVPETMRALHVRRVAPAISGRRAPPARSHAPHATKVSPGQDCVCRVRLATFTVVGASRLVCAPVLLSAVPVPTGMEPALPVHRANGERGASQHATVMEASAVRGPVEVGCAPAARRTSMGRTVRLRALATGERAVTDRVGAAHA* # ORIGINAL: g11512.t1 original gene structure, not modified by PASA NODE_1857_length_8881_cov_46.1151 AUGUSTUS gene 2105 2554 . - . ID=g11512;Name=g11512.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS mRNA 2105 2554 . - . ID=g11512.t1;Parent=g11512;Name=g11512.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 2105 2554 . - . ID=g11512.t1.exon1;Parent=g11512.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 2105 2554 . - 0 ID=cds.g11512.t1;Parent=g11512.t1 #PROT g11512.t1 g11512 MVLLDLELVRHARDFITDFPAHPAAPATAARAQKVPEELVHVSPVPPTFMARRVRLNATAMEARAMTVPRETESARRVLRTPMVPRARLCATATVARAETVHRVTASAWSAAPTTMGQSAVYSATLPRRAVDTEPAMGRRVIARVPAIL* # ORIGINAL: g11511.t1 original gene structure, not modified by PASA NODE_1857_length_8881_cov_46.1151 AUGUSTUS gene 1397 1870 . - . ID=g11511;Name=g11511.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS mRNA 1397 1870 . - . ID=g11511.t1;Parent=g11511;Name=g11511.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS exon 1397 1870 . - . ID=g11511.t1.exon1;Parent=g11511.t1 NODE_1857_length_8881_cov_46.1151 AUGUSTUS CDS 1397 1870 . - 0 ID=cds.g11511.t1;Parent=g11511.t1 #PROT g11511.t1 g11511 MDLDANRHARATADYVMMALLVVGFVSIALSDSMGLRARSRATAMEGHVTKAQRATGHARGVHRESMGLRVRQRATAAVCRAKMGRLGTATAPTALKTRSGSRAEPVAATAEPAAMALVATERVFLAQPIDMELHAAAFVSAMEAHAVTGLPPKAGA* # ORIGINAL: g877.t1 original gene structure, not modified by PASA NODE_7410_length_441_cov_46.8033 AUGUSTUS gene 1 338 . - . ID=g877;Name=g877.t1 NODE_7410_length_441_cov_46.8033 AUGUSTUS mRNA 1 338 . - . ID=g877.t1;Parent=g877;Name=g877.t1 NODE_7410_length_441_cov_46.8033 AUGUSTUS exon 281 338 . - . ID=g877.t1.exon1;Parent=g877.t1 NODE_7410_length_441_cov_46.8033 AUGUSTUS CDS 281 338 . - 0 ID=cds.g877.t1;Parent=g877.t1 NODE_7410_length_441_cov_46.8033 AUGUSTUS exon 1 66 . - . ID=g877.t1.exon2;Parent=g877.t1 NODE_7410_length_441_cov_46.8033 AUGUSTUS CDS 1 66 . - 2 ID=cds.g877.t1;Parent=g877.t1 #PROT g877.t1 g877 MERFASRYHGENPAVFVNADTAYVLAFSVVMLNTDLHNPSV # PASA_UPDATE: g8522.t1, single gene model update, valid-1, status:[pasa:asmbl_6654,status:12], valid-1 NODE_3864_length_2603_cov_40.3212 . gene 1 372 . + . ID=g8522;Name=g8522.t1 NODE_3864_length_2603_cov_40.3212 . mRNA 1 372 . + . ID=g8522.t1;Parent=g8522;Name=g8522.t1 NODE_3864_length_2603_cov_40.3212 . five_prime_UTR 1 2 . + . ID=g8522.t1.utr5p1;Parent=g8522.t1 NODE_3864_length_2603_cov_40.3212 . exon 1 372 . + . ID=g8522.t1.exon1;Parent=g8522.t1 NODE_3864_length_2603_cov_40.3212 . CDS 3 179 . + 0 ID=cds.g8522.t1;Parent=g8522.t1;5_prime_partial=true NODE_3864_length_2603_cov_40.3212 . three_prime_UTR 180 372 . + . ID=g8522.t1.utr3p1;Parent=g8522.t1 #PROT g8522.t1 g8522 HGGHRQLLPYVPATPPSQAHLVVRRRSRCGHVRLRGIPGHHALRQRKGHPELRRMITA* # ORIGINAL: g3345.t1 original gene structure, not modified by PASA NODE_1633_length_10101_cov_53.429 AUGUSTUS gene 1983 10043 . - . ID=g3345;Name=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS mRNA 1983 10043 . - . ID=g3345.t1;Parent=g3345;Name=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 9560 10043 . - . ID=g3345.t1.exon1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 9560 10043 . - 0 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 9115 9270 . - . ID=g3345.t1.exon2;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 9115 9270 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 8714 8857 . - . ID=g3345.t1.exon3;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 8714 8857 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 8463 8598 . - . ID=g3345.t1.exon4;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 8463 8598 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 7931 8097 . - . ID=g3345.t1.exon5;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 7931 8097 . - 1 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 7183 7382 . - . ID=g3345.t1.exon6;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 7183 7382 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 6328 6541 . - . ID=g3345.t1.exon7;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 6328 6541 . - 0 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 5724 5917 . - . ID=g3345.t1.exon8;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 5724 5917 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 4998 5308 . - . ID=g3345.t1.exon9;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 4998 5308 . - 0 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 4677 4787 . - . ID=g3345.t1.exon10;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 4677 4787 . - 1 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 4167 4289 . - . ID=g3345.t1.exon11;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 4167 4289 . - 1 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 3685 3733 . - . ID=g3345.t1.exon12;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 3685 3733 . - 1 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 3263 3345 . - . ID=g3345.t1.exon13;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 3263 3345 . - 0 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 2847 2911 . - . ID=g3345.t1.exon14;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 2847 2911 . - 1 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 2433 2515 . - . ID=g3345.t1.exon15;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 2433 2515 . - 2 ID=cds.g3345.t1;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS exon 1983 2168 . - . ID=g3345.t1.exon16;Parent=g3345.t1 NODE_1633_length_10101_cov_53.429 AUGUSTUS CDS 1983 2168 . - 0 ID=cds.g3345.t1;Parent=g3345.t1 #PROT g3345.t1 g3345 MIDKGVDVLFAAGSLGGSRAIFYAAGKGVYVIGVDGDESKTTFANMTDSRRERYLTSAEKRVDSAVYQSIYERFSSNTYTGGNKVLDASYDGVRLSPCNSTLVCSELSRRKTVVTEAVSGGCPEVHVMPIGERIATITTMLKNKLITTGLQFDGQLQALGQAPNVWSRIVPFGDRIPAMRGHTMVVDGGNNIYVYGGETKAASVTASLYMLNYDDFELARLPDGPAPLSDHVAASYREVMFVFGGRGANATISATMRAYNTTDGSWSIVSSGGAPSGRSESASAQVGNALYMFGGFTSSLALTNEFWSFNMATRTWQSLSVTSTVPPLRAACLIGGPHDRTLFLFGGETVAGPTNRLFKYTIESSTWTELMPVGAIPPPLSRARGWLADASRIMIAGGVGGSQSAAALQSISSGVHALNIDRVEWVTGDAADLPDAIHSFSIVSFNQSRDASACVYQPLGFPQWCTVSTRLSVVALGGIGSQGLTSALNIFRVGDPKQAPVTDGNVAGGVASYVIPVAVAIPGSVLVFVGLAIIVWQRSKSGAEKRARNWLIRPAEIEFGTRIGEGSFGEVYLGRFRGTVVALKTLKSASNTGGLDEKLRTLSPDNIDGTINSALGRSASSGATSDGLGSKIVRKLSLSRIRSNAGRTSSRSKGPNENPLDTLIREVDTMTALRHPNIVMFMGACLESGQDQRLNQCLVLEYMAGGSLMDFYRSDNPFPWSQRISALCDASRGVLYLHSATPPILHRDLKSLNLLLDDKMRVKVSDFGLAILKPTGPRRSLGGQTTAGSLRWMCPSLFNESRYDESCDTYSFGIVIHEVASRQPPYEEIRHADANALMLRIVMEHQRPLLPVLTPAPIVRLAKSCVHADKTERPSFATIVSTLEVLAMDPEVVDAPETRLE* # PASA_UPDATE: g3344.t1, single gene model update, valid-1, status:[pasa:asmbl_2204,status:12], valid-1 NODE_1633_length_10101_cov_53.429 . gene 188 900 . - . ID=g3344;Name=g3344.t1 NODE_1633_length_10101_cov_53.429 . mRNA 188 900 . - . ID=g3344.t1;Parent=g3344;Name=g3344.t1 NODE_1633_length_10101_cov_53.429 . five_prime_UTR 782 900 . - . ID=g3344.t1.utr5p1;Parent=g3344.t1 NODE_1633_length_10101_cov_53.429 . exon 463 900 . - . ID=g3344.t1.exon1;Parent=g3344.t1 NODE_1633_length_10101_cov_53.429 . CDS 463 781 . - 0 ID=cds.g3344.t1;Parent=g3344.t1 NODE_1633_length_10101_cov_53.429 . exon 188 282 . - . ID=g3344.t1.exon2;Parent=g3344.t1 NODE_1633_length_10101_cov_53.429 . CDS 188 282 . - 2 ID=cds.g3344.t1;Parent=g3344.t1;3_prime_partial=true #PROT g3344.t1 g3344 MSTTVTRTATSIDSAGTHTYVRRLKNYDFETRKGLFVALETTNLAITAAKSLVLVLIGEKPVVAHEVPRKFIQNAAKDMAIITTKVLLQRAAEKTLHARTASKLMKDISKSATRKFVRTGSKSAAAVGIVRTGLRSQV # PASA_UPDATE: g9308.t1, single gene model update, valid-1, status:[pasa:asmbl_2974,status:12], valid-1 NODE_1903_length_8645_cov_23.5216 . gene 7385 8645 . - . ID=g9308;Name=g9308.t1 NODE_1903_length_8645_cov_23.5216 . mRNA 7385 8645 . - . ID=g9308.t1;Parent=g9308;Name=g9308.t1 NODE_1903_length_8645_cov_23.5216 . exon 8563 8645 . - . ID=g9308.t1.exon1;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . CDS 8563 8645 . - 0 ID=cds.g9308.t1;Parent=g9308.t1;5_prime_partial=true NODE_1903_length_8645_cov_23.5216 . exon 8168 8310 . - . ID=g9308.t1.exon2;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . CDS 8168 8310 . - 1 ID=cds.g9308.t1;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . exon 7767 7842 . - . ID=g9308.t1.exon3;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . CDS 7767 7842 . - 2 ID=cds.g9308.t1;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . exon 7385 7652 . - . ID=g9308.t1.exon4;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . CDS 7520 7652 . - 1 ID=cds.g9308.t1;Parent=g9308.t1 NODE_1903_length_8645_cov_23.5216 . three_prime_UTR 7385 7519 . - . ID=g9308.t1.utr3p1;Parent=g9308.t1 #PROT g9308.t1 g9308 WYKNTSLLLLDARNGDPWPSLAFFHIPSEEYLAVFPGTGCGGVANESVTPQEANHGLLDALVGGNITATFVGHDHGNDWCCPYKGLHVCYGRHTGYGGYGEWMHGARIIQISENSGKVDSWIRLEDGSVIERTSLTRGSTSAST* # ORIGINAL: g9306.t1 original gene structure, not modified by PASA NODE_1903_length_8645_cov_23.5216 AUGUSTUS gene 3016 4629 . - . ID=g9306;Name=g9306.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS mRNA 3016 4629 . - . ID=g9306.t1;Parent=g9306;Name=g9306.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 3016 4629 . - . ID=g9306.t1.exon1;Parent=g9306.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 3016 4629 . - 0 ID=cds.g9306.t1;Parent=g9306.t1 #PROT g9306.t1 g9306 MLRAAQLTCMRRTMTAGPPISASPFRLIYLIYSPDPSNDWILHDDADTVARGAHRKLLGALLGAAIGDAHGAASDRTFDTPAFVRSHFSEGESVQLASDNKFSVPFMKPSERMLIFESDADNCMRDLYLADPKTTLKILENTTLLDGGRNLWAKGGDGTEQTIATIRVLMDMAVSGGRMSIPLVRLYGRHFNFINARDNRSESATDRFGREPILTLSSLASHSQFSAEVVRNRTRFEHQGLGVLPGLLPLALLGSGKDIEEATQLSEELSLIAVGPSQLAINISRFVARTLHRIVYLEESPEDALDRVVEMDMADAPLFAESLHYANAWADLARKTLSRYTADESKLSWLGIDIVSIATMSHEITVAAAPGPKGERRNITYNPIVGHDPLSVLRVVMYIIIVRHSESLGRALALNTALGGWSSGRGAIIGAIFGAARGDSKLPKSLRLKLGFPGRWISAYVEMVQHLRKIMPADPLFPDRPRGSRSYTAARARRSILLGYVDIDDVLGAGSVTRAKAFTPTSPIDKKEIPKEAKDEL* # ORIGINAL: g9305.t1 original gene structure, not modified by PASA NODE_1903_length_8645_cov_23.5216 AUGUSTUS gene 145 2574 . + . ID=g9305;Name=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS mRNA 145 2574 . + . ID=g9305.t1;Parent=g9305;Name=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 145 285 . + . ID=g9305.t1.exon1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 145 285 . + 0 ID=cds.g9305.t1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 514 615 . + . ID=g9305.t1.exon2;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 514 615 . + 0 ID=cds.g9305.t1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 797 1024 . + . ID=g9305.t1.exon3;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 797 1024 . + 0 ID=cds.g9305.t1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 1142 2090 . + . ID=g9305.t1.exon4;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 1142 2090 . + 0 ID=cds.g9305.t1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 2223 2347 . + . ID=g9305.t1.exon5;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 2223 2347 . + 2 ID=cds.g9305.t1;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 2485 2574 . + . ID=g9305.t1.exon6;Parent=g9305.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 2485 2574 . + 0 ID=cds.g9305.t1;Parent=g9305.t1 #PROT g9305.t1 g9305 ERRNITSYPVLELYIGGAIYTYNGGCQPWELIAYVRAMITPAVHVNDLDVATRIKSQDEWALFANVECEDARDTSNCPQFNTMRRALRLAGVPIPAGVTVNSPPIAAALGLPSQGPNVVLAALRNNSVVAFPGAFEESALAEWIALTESDRLVTKLTVSNYHDILVDGTGRTASVVLFVQLSEEGIAQTMLHEYLGVAIEYEAKKAPLRFLYADRVRYSGLAERMGLVHAAEDVATAEDEEGEIKGTGAAYVMELQRRQQRKRAKELLLAEKVDEASTGDNSKTPTSEMTTLLPVIGIVRANTSGVYEPRKEWRARALTGQTIRKFCSFFLENLLDPVRVVGVDAQRLYFEDVASFLDVGRPSEEIAANRAERIAKLMAKEELSRRQWRPVIPITPEMFAMVVAGRFRDLPHLSLEADHVTSDEFAAPDSTGSVGRFDTARSPHAVVLLAHGSWCGMCVAMRPVFRAVARAWAASPHGKNVFFASYELTDVGHPAPDYNTIAELPSVIVYIPGESPVVYEERTPNLHSLMLFMREHLVHRHYQE* # ORIGINAL: g9307.t1 original gene structure, not modified by PASA NODE_1903_length_8645_cov_23.5216 AUGUSTUS gene 5670 7257 . + . ID=g9307;Name=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS mRNA 5670 7257 . + . ID=g9307.t1;Parent=g9307;Name=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 5670 6216 . + . ID=g9307.t1.exon1;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 5670 6216 . + 0 ID=cds.g9307.t1;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 6339 6452 . + . ID=g9307.t1.exon2;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 6339 6452 . + 2 ID=cds.g9307.t1;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 6602 6770 . + . ID=g9307.t1.exon3;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 6602 6770 . + 2 ID=cds.g9307.t1;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS exon 6921 7257 . + . ID=g9307.t1.exon4;Parent=g9307.t1 NODE_1903_length_8645_cov_23.5216 AUGUSTUS CDS 6921 7257 . + 1 ID=cds.g9307.t1;Parent=g9307.t1 #PROT g9307.t1 g9307 MTMELTPMGSSIAGSTPTPSYSSITATSSQTMSFNVTRSSVGESFSMGRLFELPEQRASDANATPAKEASRDSTAGRRSTSASSERNRPSNVSQAAVSSERSELLGSALSSARSSVDATSKTRPATDGNKAAKGSAENHGGRASTASGKVAVANDTAAASKKSSVAEKGKGKSSTPNWQKRAVVEALQKANPKLDILVIKAAAKIAKYDVDLAKNIIARQGAEGGASGTAAETFFTESYKTGQTPARRTVQFETPVFRSTQPPTSSTPVASAVDMRDISLDHEISPLAFAARPSRNSATPRPSVGTNAQVPPQSTPAVPGSIRTCTGTANCTSPRAGRRTCAVGPDPALRLSKTQPASLAVGPDPLLRRGPDRALVAGPMMRAARATV* # ORIGINAL: g3829.t1 original gene structure, not modified by PASA NODE_2886_length_4842_cov_69.2196 AUGUSTUS gene 206 2295 . + . ID=g3829;Name=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS mRNA 206 2295 . + . ID=g3829.t1;Parent=g3829;Name=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS exon 206 307 . + . ID=g3829.t1.exon1;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS CDS 206 307 . + 2 ID=cds.g3829.t1;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS exon 697 812 . + . ID=g3829.t1.exon2;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS CDS 697 812 . + 2 ID=cds.g3829.t1;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS exon 1186 1320 . + . ID=g3829.t1.exon3;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS CDS 1186 1320 . + 0 ID=cds.g3829.t1;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS exon 1559 1656 . + . ID=g3829.t1.exon4;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS CDS 1559 1656 . + 0 ID=cds.g3829.t1;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS exon 2088 2295 . + . ID=g3829.t1.exon5;Parent=g3829.t1 NODE_2886_length_4842_cov_69.2196 AUGUSTUS CDS 2088 2295 . + 1 ID=cds.g3829.t1;Parent=g3829.t1 #PROT g3829.t1 g3829 SVKVWDVRQKDKPVANMEPAEGDARRDCWTVAFGNSYNDNERCICAGYDNGDIKMFDLRTMSLRWETNVKSGVVSLEFDRRDIEMNKLIATTLDSKFFVFDLRTQHHEKGFASLSDSAHNSTIWCGRHLPQNRDVFLTTGGSGSLSLWKYSYPEQRSLKDEKGHAYGVAGTVSMLNSVTVATQPVASFDWSPDKEGLAVCTSFDQCVRVMIVTKLNKL* # ORIGINAL: g1563.t1 original gene structure, not modified by PASA NODE_4109_length_2176_cov_33.7706 AUGUSTUS gene 175 474 . + . ID=g1563;Name=g1563.t1 NODE_4109_length_2176_cov_33.7706 AUGUSTUS mRNA 175 474 . + . ID=g1563.t1;Parent=g1563;Name=g1563.t1 NODE_4109_length_2176_cov_33.7706 AUGUSTUS exon 175 474 . + . ID=g1563.t1.exon1;Parent=g1563.t1 NODE_4109_length_2176_cov_33.7706 AUGUSTUS CDS 175 474 . + 0 ID=cds.g1563.t1;Parent=g1563.t1 #PROT g1563.t1 g1563 PVLECAEKRVARFERLMSPDDTHIFHTIWREVHTERDFHAEVKAICVSIAVAIHAIQQQQLLIANQPAVVENVVILPALSSRAIKAAPPECGYESVTAQ* # ORIGINAL: g3472.t1 original gene structure, not modified by PASA NODE_1930_length_8483_cov_39.9592 AUGUSTUS gene 104 7609 . - . ID=g3472;Name=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS mRNA 104 7609 . - . ID=g3472.t1;Parent=g3472;Name=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 7578 7609 . - . ID=g3472.t1.exon1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 7578 7609 . - 0 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 5638 7249 . - . ID=g3472.t1.exon2;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 5638 7249 . - 1 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 4994 5368 . - . ID=g3472.t1.exon3;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 4994 5368 . - 0 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 4264 4778 . - . ID=g3472.t1.exon4;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 4264 4778 . - 0 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 3926 4003 . - . ID=g3472.t1.exon5;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 3926 4003 . - 1 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 3429 3531 . - . ID=g3472.t1.exon6;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 3429 3531 . - 1 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 3179 3274 . - . ID=g3472.t1.exon7;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 3179 3274 . - 0 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 2852 3003 . - . ID=g3472.t1.exon8;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 2852 3003 . - 0 ID=cds.g3472.t1;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS exon 104 2711 . - . ID=g3472.t1.exon9;Parent=g3472.t1 NODE_1930_length_8483_cov_39.9592 AUGUSTUS CDS 104 2711 . - 1 ID=cds.g3472.t1;Parent=g3472.t1 #PROT g3472.t1 g3472 MATSPGSRRARRRSSVQSLWKSREDADDESHLSQSMCASLASLTHLDEKEINDLEGYFRSLRDTAVDGLVDADALSAVLCPTVSRALLDQIFAAFDDDMDGLVDLRQFLCGLSSCCRGSAHDKLKFCFRTYAAAAEDGRLSKADALHMLRSVWKIVDIHAHLAAISSAEEEEEGIDAADGESDAAVDGYDDDRSNRGGGDSETGSIGRVHSGDNGSLRAGGGANDDDSTSLHPRGSYSNHSTGRGTDGASTQYPSQQSRDRRRGSFPPPSPAASVRSARRLNTMHSVAADPMTALLDRLFADLNLSKSDDKISFAECQQWVSRNPTALQFLNRVKLIANLNLGPRPRSPREEKELVRRLESESADMVVGQTRYVCSFRWWKLWCEYVDYYDTEADSVVQGSGLNGQALESVSDWATGVPPPGVIDNTDIIDPSQPHWDEFGGLVPFVVATTAAAPGQVADSQMQASAGGAAGFGANPSDVSGGMATVAAHGDYMPFWSMRQNLVENLDYVILSQGVWAALVSWYGGGPALPRTVVSQKKARRLSFVEAVNPMNRTRGKQLATQIELHPLRLTVVDMHSDHPGQAGETLSRDGREAVTAVAELAAAISLSSSSERRLDASGSGSGSGSGSGSGSGSESAGGIPRPTIARIVCSKTTTAARLCEIACNIFGIATQDSKSRTLFSAKSTSLRTVRLWSCYDPARPEKLSSLDTKLEDARVVDLQCVVVERLVVAMQRQSSSSGLGSQQGHEGPGVLARQFSQQSASESAIPTPVGVDAPGKWGDGVVGLANLGNTCFMNSALQCLSHVGPLRDYFLSDAFEAHINTTNPLGMKGEFARVYSGLVKKIWTSKSSTVFAPRQFKTVISKFAPQFAGYDQQDAQELIGFVLDGLHEDLNRVIDKPTTECVEPNKRPDDLVAREFWSNHLRRNQSIIVDLFQGQLKSTVTCASCGHCSPAFDPFTFLSVPIPDTVRTQVMELVLVCVDGRRLRSRVCARRDGTLVDVRAALARLDGVSIDASRTVIAEMQNGYVFNIPKDSRKVGAISEKDTLWAFELPPPSRNIFVTAGRSRSMASTAGVSTNLSMNASVNASVNGTTQLRERVVRLVHRRFDGGGGASLSTQSAQLASSRGFTTDSVDAMGNRPVLFGMPGLLVLPSSVAPPDVWGVVSDYVARSIENWGDVCDEWRRECKQSGGGGGLVYSSLQARWASGNAAVIGEQLAQASAHTRTMRAAGGKKAGDASLSGDHVSDSDPRGHVAGDDAGADVVDALHSATSSTRSARLRGGDSATVELRPHPGWGSRRGSLSELGAPDEPQWSVTNGQPKGTGFRFLKQAARAQADTDGGAKALAGAAQSADAEGDVDAASVHAARSIRRGSVEFDNASLYSYAACAEFTPDYPFRLRLVNRNGSGCGRCKRVDCLGCEVTADGSEYRSIEFTDTDTIAVDWFPSALRRLAFIPISLHKTVSRPSQTQKGSLGRQSSSSASAEDPFTASMASTSSVSAVAVGVSGSGSGSGSTGAHRPLSGSFNNGPPSLTLAECMREFAREERLGDSEWHCPGCKAFRAASKAIGVWRAPRILVVHLKRFRFNEYGRCAKLTAMVDFELEGLSLDPLVSEGADAASVGDGPLASDYDLCAVVNHFGTLTSGHYVAYAFNESRRSWYCFDDSSCRPIEPDEVRTSAAYLLFYKRRESGPVKSDAPLQQQQPASQQQPQRPSSRDDASHLSVRSLGASSTSTGAVVGGAHRAASGTATPSVGIGSSSGQSGQASGSASSVSRPAGGGVTSVRSSSIGDNLSTRSAPGAVGGGHLGSARTGRSKGGTGGTKSFGRDNVTHVEEDDTCTDISRPIVALQGRSRSVACTLL* # PASA_UPDATE: g848.t1, single gene model update, valid-1, status:[pasa:asmbl_7197,status:12], valid-1 NODE_4291_length_1863_cov_35.4933 . gene 783 1777 . + . ID=g848;Name=g848.t1 NODE_4291_length_1863_cov_35.4933 . mRNA 783 1777 . + . ID=g848.t1;Parent=g848;Name=g848.t1 NODE_4291_length_1863_cov_35.4933 . five_prime_UTR 783 784 . + . ID=g848.t1.utr5p1;Parent=g848.t1 NODE_4291_length_1863_cov_35.4933 . exon 783 819 . + . ID=g848.t1.exon1;Parent=g848.t1 NODE_4291_length_1863_cov_35.4933 . CDS 785 819 . + 0 ID=cds.g848.t1;Parent=g848.t1;5_prime_partial=true NODE_4291_length_1863_cov_35.4933 . exon 1382 1554 . + . ID=g848.t1.exon2;Parent=g848.t1 NODE_4291_length_1863_cov_35.4933 . CDS 1382 1554 . + 1 ID=cds.g848.t1;Parent=g848.t1 NODE_4291_length_1863_cov_35.4933 . exon 1743 1777 . + . ID=g848.t1.exon3;Parent=g848.t1 NODE_4291_length_1863_cov_35.4933 . CDS 1743 1777 . + 2 ID=cds.g848.t1;Parent=g848.t1 #PROT g848.t1 g848 LSFFSLFRELARMPGTTLKDVNSHDFVRAYAAFLKRSGKVEVPKWADLVKTGTFKELAPYDPDWFYIRCDSGQYCSRMNF* # PASA_UPDATE: g8249.t1, single gene model update, valid-1, status:[pasa:asmbl_3570,status:12], valid-1 NODE_2121_length_7633_cov_40.55 . gene 4662 7572 . - . ID=g8249;Name=g8249.t1 NODE_2121_length_7633_cov_40.55 . mRNA 4662 7572 . - . ID=g8249.t1;Parent=g8249;Name=g8249.t1 NODE_2121_length_7633_cov_40.55 . five_prime_UTR 7556 7572 . - . ID=g8249.t1.utr5p1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 7430 7572 . - . ID=g8249.t1.exon1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 7430 7555 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 6989 7063 . - . ID=g8249.t1.exon2;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 6989 7063 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 6581 6685 . - . ID=g8249.t1.exon3;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 6581 6685 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 6316 6405 . - . ID=g8249.t1.exon4;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 6316 6405 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 5881 6033 . - . ID=g8249.t1.exon5;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 5881 6033 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 5474 5632 . - . ID=g8249.t1.exon6;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 5474 5632 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 5038 5232 . - . ID=g8249.t1.exon7;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 5038 5232 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . exon 4662 4794 . - . ID=g8249.t1.exon8;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . CDS 4723 4794 . - 0 ID=cds.g8249.t1;Parent=g8249.t1 NODE_2121_length_7633_cov_40.55 . three_prime_UTR 4662 4722 . - . ID=g8249.t1.utr3p1;Parent=g8249.t1 #PROT g8249.t1 g8249 MLVECVVNTHQAIRAVAPLATAVERFRPSPEHLTPLHCEFLKVCILAKCYRQALRILEIPVTELSPKATSLDPVHVLLYHYYGGIVYCSQKRFKDALYFFQLAITVPAFTTSAVAIEAYKKYILVSLLVNGQVGALPKHASTTIVRSLRVYTEAYTELATAFEKRDPQHLRAVAQDRMNTFHEDRNVGLVKQCLESVYNANIERLTQTYLTLSLADIASTVHLRGAAEAESYVLKMIENKQIFAKIDQVAGMVSFHDDPEEYDSIDTIEKIESHVRRAREIFAAMKRKEDQISVSAHYLSKSAQPDRVNPGYEEDLELETKANP* # PASA_UPDATE: g8247.t1, single gene model update, valid-1, status:[pasa:asmbl_3569,status:12], valid-1 NODE_2121_length_7633_cov_40.55 . gene 53 2583 . - . ID=g8247;Name=g8247.t1 NODE_2121_length_7633_cov_40.55 . mRNA 53 2583 . - . ID=g8247.t1;Parent=g8247;Name=g8247.t1 NODE_2121_length_7633_cov_40.55 . five_prime_UTR 2432 2583 . - . ID=g8247.t1.utr5p1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 2384 2583 . - . ID=g8247.t1.exon1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 2384 2431 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 2009 2074 . - . ID=g8247.t1.exon2;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 2009 2074 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 1830 1892 . - . ID=g8247.t1.exon3;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 1830 1892 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 1550 1708 . - . ID=g8247.t1.exon4;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 1550 1708 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 1142 1354 . - . ID=g8247.t1.exon5;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 1142 1354 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 769 814 . - . ID=g8247.t1.exon6;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 769 814 . - 0 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 542 605 . - . ID=g8247.t1.exon7;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 542 605 . - 2 ID=cds.g8247.t1;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . exon 53 201 . - . ID=g8247.t1.exon8;Parent=g8247.t1 NODE_2121_length_7633_cov_40.55 . CDS 53 201 . - 1 ID=cds.g8247.t1;Parent=g8247.t1;3_prime_partial=true #PROT g8247.t1 g8247 MEPLGESASRRLAAVKRHLVPIAHIGVSPNEVSSSSANAKKFGGPLGQYRKEASFDADNMRRFLEGPYYDFKRRVYAALSKDPLFRHPVIELELTRAEHREVCYKQMRRLVEYGFVGEDEGRADPFKGFVLNEIMSSYDMSLAPKFSLTQGMFARALETLGTERHRKYIPLVRNLRIVGCFALTELSHGTNVRGMTTTATYDPTTQEFVLNTPDYLATKWWIGLLGQTANFAIVMANLIIGGNDLGLHPFLVPVRDMDEHRPFAGVLVG # PASA_UPDATE: g8248.t1, single gene model update, valid-1, status:[pasa:asmbl_3571,status:12], valid-1 NODE_2121_length_7633_cov_40.55 . gene 2977 4373 . + . ID=g8248;Name=g8248.t1 NODE_2121_length_7633_cov_40.55 . mRNA 2977 4373 . + . ID=g8248.t1;Parent=g8248;Name=g8248.t1 NODE_2121_length_7633_cov_40.55 . five_prime_UTR 2977 3021 . + . ID=g8248.t1.utr5p1;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . exon 2977 3117 . + . ID=g8248.t1.exon1;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . CDS 3022 3117 . + 0 ID=cds.g8248.t1;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . exon 3515 3649 . + . ID=g8248.t1.exon2;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . CDS 3515 3649 . + 0 ID=cds.g8248.t1;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . exon 4196 4373 . + . ID=g8248.t1.exon3;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . CDS 4196 4285 . + 0 ID=cds.g8248.t1;Parent=g8248.t1 NODE_2121_length_7633_cov_40.55 . three_prime_UTR 4286 4373 . + . ID=g8248.t1.utr3p1;Parent=g8248.t1 #PROT g8248.t1 g8248 MAPIEGGIAVGLKKGHVVTKRELKPRPSNRKGHLNKRVKFVRDLIREVTGFAPYERRVMELLKVGKDKRALKLTKRRLGTHRRGKAKREELTNILASMRKAASQQH* # PASA_UPDATE: g5494.t1, single gene model update, valid-1, status:[pasa:asmbl_6754,status:12], valid-1 NODE_3945_length_2477_cov_40.7261 . gene 72 2256 . + . ID=g5494;Name=g5494.t1 NODE_3945_length_2477_cov_40.7261 . mRNA 72 2256 . + . ID=g5494.t1;Parent=g5494;Name=g5494.t1 NODE_3945_length_2477_cov_40.7261 . five_prime_UTR 72 73 . + . ID=g5494.t1.utr5p1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . exon 72 200 . + . ID=g5494.t1.exon1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 74 200 . + 0 ID=cds.g5494.t1;Parent=g5494.t1;5_prime_partial=true NODE_3945_length_2477_cov_40.7261 . exon 399 521 . + . ID=g5494.t1.exon2;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 399 521 . + 2 ID=cds.g5494.t1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . exon 786 917 . + . ID=g5494.t1.exon3;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 786 917 . + 2 ID=cds.g5494.t1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . exon 1165 1287 . + . ID=g5494.t1.exon4;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 1165 1287 . + 2 ID=cds.g5494.t1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . exon 1784 1909 . + . ID=g5494.t1.exon5;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 1784 1909 . + 2 ID=cds.g5494.t1;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . exon 2111 2256 . + . ID=g5494.t1.exon6;Parent=g5494.t1 NODE_3945_length_2477_cov_40.7261 . CDS 2111 2256 . + 2 ID=cds.g5494.t1;Parent=g5494.t1 #PROT g5494.t1 g5494 KSVVDAFCGTNAVTALATLLRMNDRPPVQYHAVRLVVSLASNDQSRQTLYREDVIGPVVDLLACGKEKISKNAVRAVINLSFSEAVFIQAELRKSNVLTRLVGLLQAEASSELQALAVQALMNLSVNDINQVALCQGGALPTLVRLISTGTEEVKRSTSFVLCNLATNERSKDEIRNAGGLLPLVSLLTSGRVDIKTEALKAITNLAAGSPANQAALRLFGAIPKLVDNYDSPDADIVSFALWATANLAVDGVCVCLC* # ORIGINAL: g1175.t1 original gene structure, not modified by PASA NODE_2140_length_7539_cov_37.3048 AUGUSTUS gene 1573 7430 . + . ID=g1175;Name=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS mRNA 1573 7430 . + . ID=g1175.t1;Parent=g1175;Name=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 1573 1839 . + . ID=g1175.t1.exon1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 1573 1839 . + 0 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 2011 2371 . + . ID=g1175.t1.exon2;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 2011 2371 . + 0 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 2602 2685 . + . ID=g1175.t1.exon3;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 2602 2685 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 2829 2933 . + . ID=g1175.t1.exon4;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 2829 2933 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 3075 3220 . + . ID=g1175.t1.exon5;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 3075 3220 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 3529 3619 . + . ID=g1175.t1.exon6;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 3529 3619 . + 0 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 3878 3985 . + . ID=g1175.t1.exon7;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 3878 3985 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 4088 5295 . + . ID=g1175.t1.exon8;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 4088 5295 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 5567 6338 . + . ID=g1175.t1.exon9;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 5567 6338 . + 0 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 6497 6653 . + . ID=g1175.t1.exon10;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 6497 6653 . + 2 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 6953 7124 . + . ID=g1175.t1.exon11;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 6953 7124 . + 1 ID=cds.g1175.t1;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS exon 7294 7430 . + . ID=g1175.t1.exon12;Parent=g1175.t1 NODE_2140_length_7539_cov_37.3048 AUGUSTUS CDS 7294 7430 . + 0 ID=cds.g1175.t1;Parent=g1175.t1 #PROT g1175.t1 g1175 MSSSQTRRAVLFSCFRVLQGVIRVNLTYSLSINATIDAEMDDGAREEDAVAAATDAPAAAPTKTDDDEMAEVGAFVKFVEQQSLDLSQKGVNLTKNPTSRPGSRASNGSASSITKKATGANGRRKKAATQPESNPGPAGADAGLADTAPLRPSILKREASRGGMSLSQSQTHMQAQMQSQLASQQLMTQPPQVTLGGLDALAEASLRVMGDSAPFVPQPHVTQGLNAQSQPMQWAGMAAYESAWGAPVDPPAAFNVQYLQQPMPWIGQQRPRASTAGHMLSPVPILPRTPSVHFDVSTKDKPDERERKLKFAQVVAAQHQNRDGIESTESELRQKRRRSSMSELFVRRLSHNPDEADAMPGTPYEVTKRRRKLSTEVVLINEPSYMDDDVKPAAAALMAASSAASTPHGSPFFGSVQPQRAFKQLNFDMKPDPPALGATDFPPAAVTDADADVRRESMVDAGNAVALLFHLQRQQQLQQDFLSGSTPRAPETLAPPSQPVVKQERSPLQAHGLPLPPLPMTTPPAPPRIVQRTPVSAHSHAHSYGHVTPTVVPPTPAPAVRPEDDLLRLHMTRADHERTWPDCGSVFETIAKPFPPRTPSAVSAASALSAAVTPTGAVAPATALRTPSSTGIKGKQTPHSQSHTHAHAHAHTHTHTQSPFITPGDKRPRSKKSSPVLPPNAVGGPLLAGTPSPLGGGAAVRRSSGLSGLSGLPSAPIKRFDEMTALEKSLHVMATKPHALSAEQVERRRALLSMDDAGLTSDDVALKYALPVYDSLNPEKTKAKPRGKMGDKDKGKERGKETRVVLDDTTNPKFAPNSAPGSPSQPRRAVAAASGGVGAAASGVPAKWQVGNRVEARDRDGTWHCARVRRLQSKPANDAAGGVTSAVSAAVIAPAVLPNGLTAAVPGGAIPPDAVAQNGIVTNGVTAHNDEADRDGVMPMEVDHVGPPPPVSHSGVPAHVIAHVLGENHVPRGSPSLASVQASGTMVAGGSASTSGAAVFLVHYEGWGPEYDEWLPQTDIRRIRGRNVICGPAGVEDDGRWKLRKTQAARAESSLTGMVYDSAMLRHECECLHASAVHPEQPDRLVRIINLMDCHGLLDRCRVLPSREVRHDELSLIHSRKHIGTYGYREDPKADLPNAEVMDCGGFGVACDTFFNKEMTPTAARMAAGCLIELTGKVVRGELTNGFALIRPPGHHAEADEA # PASA_UPDATE: g1174.t1, single gene model update, valid-1, status:[pasa:asmbl_3612,status:12], valid-1 NODE_2140_length_7539_cov_37.3048 . gene 109 347 . + . ID=g1174;Name=g1174.t1 NODE_2140_length_7539_cov_37.3048 . mRNA 109 347 . + . ID=g1174.t1;Parent=g1174;Name=g1174.t1 NODE_2140_length_7539_cov_37.3048 . five_prime_UTR 109 110 . + . ID=g1174.t1.utr5p1;Parent=g1174.t1 NODE_2140_length_7539_cov_37.3048 . exon 109 347 . + . ID=g1174.t1.exon1;Parent=g1174.t1 NODE_2140_length_7539_cov_37.3048 . CDS 111 188 . + 0 ID=cds.g1174.t1;Parent=g1174.t1 NODE_2140_length_7539_cov_37.3048 . three_prime_UTR 189 347 . + . ID=g1174.t1.utr3p1;Parent=g1174.t1 #PROT g1174.t1 g1174 MYRLTFRTSKELSSRRLAETLAEQF* # PASA_UPDATE: g10261.t1, single gene model update, valid-1, status:[pasa:asmbl_5891,status:3], valid-1 NODE_3327_length_3725_cov_40.5904 . gene 215 3242 . + . ID=g10261;Name=g10261.t1 NODE_3327_length_3725_cov_40.5904 . mRNA 215 3242 . + . ID=g10261.t1;Parent=g10261;Name=g10261.t1 NODE_3327_length_3725_cov_40.5904 . five_prime_UTR 215 662 . + . ID=g10261.t1.utr5p1;Parent=g10261.t1 NODE_3327_length_3725_cov_40.5904 . exon 215 1093 . + . ID=g10261.t1.exon1;Parent=g10261.t1 NODE_3327_length_3725_cov_40.5904 . CDS 663 1093 . + 0 ID=cds.g10261.t1;Parent=g10261.t1 NODE_3327_length_3725_cov_40.5904 . exon 1360 3242 . + . ID=g10261.t1.exon2;Parent=g10261.t1 NODE_3327_length_3725_cov_40.5904 . CDS 1360 3013 . + 1 ID=cds.g10261.t1;Parent=g10261.t1 NODE_3327_length_3725_cov_40.5904 . three_prime_UTR 3014 3242 . + . ID=g10261.t1.utr3p1;Parent=g10261.t1 #PROT g10261.t1 g10261 MGLAASLCGGTHGVDADRHVNGLDTTGPKSQPESLRITPRTDGDGRIVVDSGVPEVLPLGRPPPDATSTTTIPPTNSSAGIPNGSVEPAKGKSLSPKRDEGRGTPHTAPIVTSPPVATTTTATPVKSVLQGGANGEKEGGAAEGDYNPPSARKSTSNVRRVVSENLIRRNQTPRHSLTGDAPLINLDDEGKMTFMGVTTSTAAVAVAPAPLSSNKRESPRGSVSEHDRSNLDDDAKRTFMGVSHPTESLMRIASSHMSVAGKFGSQASVSGTNVSPDDLHHHNGRPSAASQPDVRGSNYTKYIRSAPVSNSRPWLDPSKHSSASNGELPISSGSSHVTDVIPEHQDKEKRRSNGQVRSQSRPQTPERVPHGHPPFLRGSSNASIKKASSDSSIFSFDMKEFIKTNGGSNGDSHNGSSSTSRPSATSSTSSPKRNRRESESADQSRDLSPKDARRESRPKRPSELRRQSSSASTAGRRAFTDSSMALQSEEIVAGVDEKVMLEFTRRLSANMNKHVFPRGAIIIRKGNLDTEMYFVKTGVVQIISADEQQVFDEVHQGSFFGELAVFHSVPRTATVRALTNCYCTSLSKEHLESVLKQFPDIAKKFSVIASRRFQQYLERSDPIKLTAAPSATTLHSQQVQLTQRSRNGSAIDASAAVSGTGSVVDSDSGAAVESPSAVQNALADPPSVAQQEGH* # PASA_UPDATE: g7512.t1, single gene model update, valid-1, status:[pasa:asmbl_4866,status:12], valid-1 NODE_2707_length_5378_cov_44.9962 . gene 3442 5378 . + . ID=g7512;Name=g7512.t1 NODE_2707_length_5378_cov_44.9962 . mRNA 3442 5378 . + . ID=g7512.t1;Parent=g7512;Name=g7512.t1 NODE_2707_length_5378_cov_44.9962 . five_prime_UTR 3442 3790 . + . ID=g7512.t1.utr5p1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 3442 3901 . + . ID=g7512.t1.exon1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 3791 3901 . + 0 ID=cds.g7512.t1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 4132 4206 . + . ID=g7512.t1.exon2;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 4132 4206 . + 0 ID=cds.g7512.t1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 4375 4471 . + . ID=g7512.t1.exon3;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 4375 4471 . + 0 ID=cds.g7512.t1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 4615 4681 . + . ID=g7512.t1.exon4;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 4615 4681 . + 2 ID=cds.g7512.t1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 4846 5047 . + . ID=g7512.t1.exon5;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 4846 5047 . + 1 ID=cds.g7512.t1;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . exon 5206 5378 . + . ID=g7512.t1.exon6;Parent=g7512.t1 NODE_2707_length_5378_cov_44.9962 . CDS 5206 5378 . + 0 ID=cds.g7512.t1;Parent=g7512.t1;3_prime_partial=true #PROT g7512.t1 g7512 MATVPVIVTTPATKPLAEDDKQKVLVDWNATDAFLPEICVQDLIQQQIEKNSDSICAGFENESEASITYHEFNLRTNRVANFLVRRGVKPDDLIGVCCNRTVDMLIAMVGIIKSGAAYVALDPSFPMDRLAYIADDAHARIILTEPALESLVETFTKMLSTQTTDTSVATTTTEDGYVVTVTTTVCTERSRIIEKVFVQSLTGQDTDHPEYDVYHRADVKPTNLCYAIYTSGSTGKPKGVM # PASA_UPDATE: g7511.t1, single gene model update, valid-1, status:[pasa:asmbl_4867,status:12], valid-1 NODE_2707_length_5378_cov_44.9962 . gene 2 3090 . + . ID=g7511;Name=g7511.t1 NODE_2707_length_5378_cov_44.9962 . mRNA 2 3090 . + . ID=g7511.t1;Parent=g7511;Name=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 2 82 . + . ID=g7511.t1.exon1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 2 82 . + 0 ID=cds.g7511.t1;Parent=g7511.t1;5_prime_partial=true NODE_2707_length_5378_cov_44.9962 . exon 267 632 . + . ID=g7511.t1.exon2;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 267 632 . + 0 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 749 939 . + . ID=g7511.t1.exon3;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 749 939 . + 0 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 1083 1257 . + . ID=g7511.t1.exon4;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 1083 1257 . + 1 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 1495 1722 . + . ID=g7511.t1.exon5;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 1495 1722 . + 0 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 1902 2077 . + . ID=g7511.t1.exon6;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 1902 2077 . + 0 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 2212 2532 . + . ID=g7511.t1.exon7;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 2212 2532 . + 1 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . exon 2693 3090 . + . ID=g7511.t1.exon8;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . CDS 2693 3077 . + 1 ID=cds.g7511.t1;Parent=g7511.t1 NODE_2707_length_5378_cov_44.9962 . three_prime_UTR 3078 3090 . + . ID=g7511.t1.utr3p1;Parent=g7511.t1 #PROT g7511.t1 g7511 PIGVTTNLFTIGGNSLFALRLRNKILEAFAVEVPVTSILQSGTVAQVEERIADMLSVVEPGRCRASVAAGNRQTFSRRVECIVPINTQGTRPPLYLVHPAGGFIFPYFTLAKYLGQSQPIYGIQDLSLDDASKRETFGTVEEMAEEYVKELLKHRPEGPYYLGGWSLGGQIAFHMAQLLKEQDKKVELVVLIDTATQEDYTRMGMLKNNMTKGMPLVRAQVKMRAKYYAEQKPESRFRKGFWNTMRKVLRADSCDEFGDIDNQAISAGVVTDPSTGKLVGTLDTHMKASSRYRPRHYDGPVLVIRCTDTNEIADVDPIMRWLRFCPRAVLRNVDGNHYNIIADPRVQRVAECISESMDVAMFAASGVPREADVGVHATVLAFSDTDEYMRVGHVIKKSDGMLVRFRSVFQLIRTNPTAQGVAAFGPCSISSGESQIVTFSAENLSSTARKSCDSGTKHELVGPISVNRGSTLDYEMKVLVLKPIDNLNMLIEVHREGYGAPAYMNRSDFGVYAARPDAYPLAFELPLFASTRHYGNFIVRITFFDANQNVLFKMKHHVEIPRGLNRESSIFGSLGFGSSRDSSRRLDGGASSLGSASISSKSPDLSLSSVAGVVCEGKVQRADTALPARVFKVLASSECA* # ORIGINAL: g8955.t1 original gene structure, not modified by PASA NODE_3019_length_4524_cov_39.0182 AUGUSTUS gene 3440 4405 . + . ID=g8955;Name=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS mRNA 3440 4405 . + . ID=g8955.t1;Parent=g8955;Name=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS exon 3440 3692 . + . ID=g8955.t1.exon1;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS CDS 3440 3692 . + 0 ID=cds.g8955.t1;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS exon 3933 3986 . + . ID=g8955.t1.exon2;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS CDS 3933 3986 . + 2 ID=cds.g8955.t1;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS exon 4096 4287 . + . ID=g8955.t1.exon3;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS CDS 4096 4287 . + 2 ID=cds.g8955.t1;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS exon 4383 4405 . + . ID=g8955.t1.exon4;Parent=g8955.t1 NODE_3019_length_4524_cov_39.0182 AUGUSTUS CDS 4383 4405 . + 2 ID=cds.g8955.t1;Parent=g8955.t1 #PROT g8955.t1 g8955 MTSNTLALYTKGVRVWIPDEEDVWGSATLAADCADGLLKLYKDNGDEIEIKIHSDAKNLPPLRNPDILEGADDLTALSYLHEPAVLDCLRVRYNGNTIYTYCGIVLVAVNPFQRLPLYSAEIIRAYTGKEMGELEPHIFAIAEDSFRAMALRNENQSIIVSGESGAVESNWSA* # PASA_UPDATE: g8954.t1, single gene model update, valid-1, status:[pasa:asmbl_5417,status:12],[pasa:asmbl_5418,status:12], valid-1 NODE_3019_length_4524_cov_39.0182 . gene 276 2702 . - . ID=g8954;Name=g8954.t1 NODE_3019_length_4524_cov_39.0182 . mRNA 276 2702 . - . ID=g8954.t1;Parent=g8954;Name=g8954.t1 NODE_3019_length_4524_cov_39.0182 . five_prime_UTR 2566 2702 . - . ID=g8954.t1.utr5p1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 2336 2702 . - . ID=g8954.t1.exon1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 2336 2565 . - 0 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 1931 2051 . - . ID=g8954.t1.exon2;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 1931 2051 . - 1 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 1566 1669 . - . ID=g8954.t1.exon3;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 1566 1669 . - 0 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 1229 1375 . - . ID=g8954.t1.exon4;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 1229 1375 . - 1 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 971 1112 . - . ID=g8954.t1.exon5;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 971 1112 . - 1 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 520 624 . - . ID=g8954.t1.exon6;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 520 624 . - 0 ID=cds.g8954.t1;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . exon 276 376 . - . ID=g8954.t1.exon7;Parent=g8954.t1 NODE_3019_length_4524_cov_39.0182 . CDS 276 376 . - 0 ID=cds.g8954.t1;Parent=g8954.t1;3_prime_partial=true #PROT g8954.t1 g8954 MLPSLQMPTLSIPFHAASLAYGSLFTPVRQSLVDLDVQTCAVFVSGFLAAGCVVRYVRDRFRKHDLKGRTVFITGCDTGFGNLLAKHLDKRGAIVVAGCLTESGRQQLQGESSPRLKTISLDVTKAESIRAARDFVAQMSPDGVWSIVNNAGILDTGFAEWTTLNDYRRVIEVNTLGTVAVTLDFLPLVRKAHGRIVNVASVAGRLSGPGLASYSMSKFGVEAFSDSLRAEVAGFGVSVHIIEPGFAKTPLVDEQVTKRILARKWDGLSEPVKAAYGEGYAEAFFESSKELIALAQDPMNIVHAMTHAITAVSPHP # ORIGINAL: g10721.t1 original gene structure, not modified by PASA NODE_1043_length_14444_cov_39.403 AUGUSTUS gene 1103 4890 . - . ID=g10721;Name=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS mRNA 1103 4890 . - . ID=g10721.t1;Parent=g10721;Name=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 4677 4890 . - . ID=g10721.t1.exon1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 4677 4890 . - 0 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 4310 4514 . - . ID=g10721.t1.exon2;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 4310 4514 . - 2 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 3848 4079 . - . ID=g10721.t1.exon3;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 3848 4079 . - 1 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 3407 3617 . - . ID=g10721.t1.exon4;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 3407 3617 . - 0 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 2990 3262 . - . ID=g10721.t1.exon5;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 2990 3262 . - 2 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 2222 2658 . - . ID=g10721.t1.exon6;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 2222 2658 . - 2 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 1770 1794 . - . ID=g10721.t1.exon7;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 1770 1794 . - 0 ID=cds.g10721.t1;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS exon 1103 1581 . - . ID=g10721.t1.exon8;Parent=g10721.t1 NODE_1043_length_14444_cov_39.403 AUGUSTUS CDS 1103 1581 . - 2 ID=cds.g10721.t1;Parent=g10721.t1 #PROT g10721.t1 g10721 MAYGKGRKRTSWWLRMREWAQRHENSRMHANADLSMRAVVMAMCAIVALSLADAAVGYSTHDATCAARPPPRTTPPIIKIAFLFNGEISDYGWSFEGNKGKLYVQERLREKALIEYSIVPDTERDKPVQMEALRAYVQRGFDLIFAHSYGYYGAVIDTAALYRNVSFVHTGGGTVPAVNVASLYMRMYQARYLTGLVAGSMTNSNQICYVAAKKVPDVYGGLNAFAIGVRRVNPNATVHVIWSGDWFDPPVENAAANSAFDRTCCDIVGQHQDSAEPLKAAIKRGKYGIGFHSRVGAILGENILTSAVWNWGPLFYEFVERRINNTWIPNYVKWPGLAEGPYVQIEELSFAIPFDVSALVERELVRLSASVANDDIFCGPMVNRRAGECMNDTELNMFEDVADGPITGHGMRGYVENLLNLGSFVMPAVKCGGPGNGCSDRGVCTAGVCSCYSGYEGPECETSSASAPIGVIVGATVGGIAGLVCVSAAVFLRWSGHKTSRLVAEARNCIIDPKEIYFDTIIGQGAYGKVYKGRWRGSVVAIKTLLGTSLSTSTEQPWSGSRKSKSASEANSSGAMNPLPLHPPRSSAPESVASDCHVCDDEHECAPASVSVSAPVAIGTSDPNAYAISLAGAPLFVLPPTTSRMIGHNTFRNLSLQQTRIKPRDRVSTLLEKIGSRLFSSRSSKVLCRNA* # PASA_UPDATE: g10722.t1, single gene model update, valid-1, status:[pasa:asmbl_165,status:3], valid-1 NODE_1043_length_14444_cov_39.403 . gene 5733 10176 . + . ID=g10722;Name=g10722.t1 NODE_1043_length_14444_cov_39.403 . mRNA 5733 10176 . + . ID=g10722.t1;Parent=g10722;Name=g10722.t1 NODE_1043_length_14444_cov_39.403 . five_prime_UTR 5733 6109 . + . ID=g10722.t1.utr5p1;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . exon 5733 6664 . + . ID=g10722.t1.exon1;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . CDS 6110 6664 . + 0 ID=cds.g10722.t1;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . exon 6838 7617 . + . ID=g10722.t1.exon2;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . CDS 6838 7617 . + 0 ID=cds.g10722.t1;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . exon 7896 10176 . + . ID=g10722.t1.exon3;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . CDS 7896 9953 . + 0 ID=cds.g10722.t1;Parent=g10722.t1 NODE_1043_length_14444_cov_39.403 . three_prime_UTR 9954 10176 . + . ID=g10722.t1.utr3p1;Parent=g10722.t1 #PROT g10722.t1 g10722 MPETHAMRQASRKHFDIAHPLPHSRRASISLPVLSDDAEVDDGGHLHVAHLQSIAHQAASEREAADNSSGNNNNNNNNNNNNIDEDAASDVTDAVALDARKLLSAHEKHSVSHHSHFDGTSTPQHRHSKRDAPPPVIITLRPDETPRTEPGSPTRMRSAALASSYDHPENADMLYEIDLLRARLKDERDARMEREEELRMLSQDYDRSKAAWAEKERSLRYGIAQPLIKSTSNCTNGAATTTFATRSFPPGLEDDYARAVNLLREKDDEIEVLKRDADEMRRALIEPEAVNDAKREHLRQTLERSETSRRDLISTLRKTQKSFNELNEKSEGMQRKLAEEKEIAVQRCRDLERSFGQQQQVADEIAKTLEFLRAEHEVLLGRYDDARIDNTTLKQTCERLAAEKLEAVGERDSIRSDLECFKADYDARQGLIAALEGKVASVISELHDARATIVSLETRISELEGYVSEFSDLEEDYENALALLADRTEDIKSLETQLEETTAEATRLAGEVASLSERASTAVAQADARIEKANMRAQEAVAESERVSAQLRAEKRARAEDVAALQEQMTSQRMAAANASDASARILSKASDLSAERDRLARTVEEKDSLLKLARLQVETERRVADDLRGKIRTMEESVKAASAGASALAAAQTQLATLRGERELHVASSKRLEKEMDGLREELRGAKEALTAATAAAIAVKEEEGSGRGGEGDGEGGAAVLDTATKAEFKRLLALEQDYIRLCEEYETMRARLDELEGLGQSRPRRALEHNNNTNTMSNNASSASMSVSVATSVTALDEPNGHASEASLNGGGDRLVGELRAEIALLEEDNRDLAERVADLEAELNGAHLHVHSHANSHSRDRDALRGRRLSGASNASSSRRSRRSEDEDTPLEFSDEDEGGDRRERDFGMEDDIAADETSVCASADGGSDDASSPPHGSRINAGHIVGGLMRANRRTSIGLDSTAAILRSGGGIDAASLARLDELDESGNSADVSREDFAMLRSEVRRLAGANARCLAALRRSEVRNQGLMGGLLQLGDLLDAVGTQRADDIGAMLKYIESTGGKDIPSSPSLAAHRSVRVAACGGPSALGPTADKKAAMESRIDAARAEFEKHKHDALAALAAAAKS* # PASA_UPDATE: g10723.t1, single gene model update, valid-1, status:[pasa:asmbl_163,status:12],[pasa:asmbl_164,status:12], valid-1 NODE_1043_length_14444_cov_39.403 . gene 10484 14040 . - . ID=g10723;Name=g10723.t1 NODE_1043_length_14444_cov_39.403 . mRNA 10484 14040 . - . ID=g10723.t1;Parent=g10723;Name=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 13989 14040 . - . ID=g10723.t1.exon1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 13989 14040 . - 0 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 13344 13598 . - . ID=g10723.t1.exon2;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 13344 13598 . - 2 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 13052 13091 . - . ID=g10723.t1.exon3;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 13052 13091 . - 2 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 12415 12601 . - . ID=g10723.t1.exon4;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 12415 12601 . - 1 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 12080 12214 . - . ID=g10723.t1.exon5;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 12080 12214 . - 0 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . exon 10484 11697 . - . ID=g10723.t1.exon6;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . CDS 10546 11697 . - 0 ID=cds.g10723.t1;Parent=g10723.t1 NODE_1043_length_14444_cov_39.403 . three_prime_UTR 10484 10545 . - . ID=g10723.t1.utr3p1;Parent=g10723.t1 #PROT g10723.t1 g10723 MEGFGSNTVDRDRDRSAIGPPGGSLYDKIRGRLSSSGAAHANGARDSSLLSESAYRASDVYSSPSASSTQTHTNGGSMDGGFASLASQGTTQWRQSTAGDPGATQRSASVHEELRPPSDGTYEARLVAEITAPGGVRATPAREDLASFVKRCATLDTARVVALLGDVIVSSEAIQSCQKALSVVESLLRSDLPEIAVTINSIRDSLKTASLSPNQTVRDKAAKVLLILGNPPTPAPASPTASRFDSFQQRLAEGQLNRPSYTPPTVASTASSISNARSAALVSFGDEAHAAQPPQPPQQQQQSSLFVGMSVHGVIATSKSNPPVQSAPSAGVSGNAGSSGLFSGMTVAQSSTPQPSVVQPKQQQQQQQQQQQQRQHQQQASLICFDVDGGLTADTSAETVAAVELDSFDPLSSLSAKSVPRASLIQNIQQQQQEQQQQQHQQQFALQQSPTPAQIFAPSGAPTAQGYAQAYAGYPPQGMYSTQQQFSIPTQQQQQGGASYGIVDRLAGLSMQLTQPTQPGMYAQQLPMNVTPQMQMQLQLHLQQQQLQQQQQLQQFQQFQQQQQFQQQQLQQQQIPQQRRASASQRPQAPDAFSFVRDEVRGSLQP* # ORIGINAL: g1744.t1 original gene structure, not modified by PASA NODE_993_length_14962_cov_37.3918 AUGUSTUS gene 205 10620 . - . ID=g1744;Name=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS mRNA 205 10620 . - . ID=g1744.t1;Parent=g1744;Name=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 10359 10620 . - . ID=g1744.t1.exon1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 10359 10620 . - 0 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 10099 10259 . - . ID=g1744.t1.exon2;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 10099 10259 . - 2 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 9723 9916 . - . ID=g1744.t1.exon3;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 9723 9916 . - 0 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 7987 9417 . - . ID=g1744.t1.exon4;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 7987 9417 . - 1 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 7317 7751 . - . ID=g1744.t1.exon5;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 7317 7751 . - 1 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 6620 7019 . - . ID=g1744.t1.exon6;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 6620 7019 . - 1 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 6094 6318 . - . ID=g1744.t1.exon7;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 6094 6318 . - 0 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 5711 5827 . - . ID=g1744.t1.exon8;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 5711 5827 . - 0 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 4013 5480 . - . ID=g1744.t1.exon9;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 4013 5480 . - 0 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 832 3697 . - . ID=g1744.t1.exon10;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 832 3697 . - 2 ID=cds.g1744.t1;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 205 406 . - . ID=g1744.t1.exon11;Parent=g1744.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 205 406 . - 1 ID=cds.g1744.t1;Parent=g1744.t1 #PROT g1744.t1 g1744 MSRQRHFAEDGGVGGGGSGGGGGGGGEADGALVAENAALGRALEDAEYEIARLREILEDMRHGAPDINSLVEVILQDERNIRTILILYQKSREVLDLLRERDERIARLEVDVDSREDLLVEMSEKMKLAGAKIDELRGRNENLAQALLDAEIEHSKVEASLKERVRDCESAVDEFSSSNEGIAAQFEHLREDAERARAQAREADNRARAMEAAAESARAQLARAVKEVEISRDANEQLLSTMPTDDMHSQLADVTSRLSETESRLLARDTERELLLSRADALAAESAMHAARANEMSLHVASANAECDRLHAELQQCRSECESLKDRLRLRDSSDKCVGVSLADLFAASEGWEDGATTDSRGKGAVERATAGDGRRRHLTATARVMTDGDATATADTRVLARLSAVQAELAACRSRAIDCEIARGRDADALIERDRQQMSRYAEQLRAAEMRAVNAEDRADSLEMRLSISTRSLKDATHDLTAALVRAEGEASELRRTIAAEIERRTMAEESLEKARADVDVAKEAVAPVTTSGVIGGDDDDSIETMRIRLRCLVSQVASAESASRDALRAAETERARSMRLEAMAVDEERRIAEISSECDRLREAHLASTQEAALVRSMLDQAEQRLRDAAGANESLDAANRALRADVAQLRESLVEESSEHMRVLARDRELLLASSRTLQRELAFARESCFCREVYDDKSPHRIALLKAAEELAMRSQLTSSATQQRNPSRAESTVRRTGHTVRTVSRGGGGDASSDGEQSGSDSDGESARESDSHSAQSFHVAPAGELAAEISALVLECDERLEMAGAELRVAHWEMDLSQATVRRLETNLAIESARRRAAESILHAQSARLLSADESRSRLCTRELELSAARLKKMHSRCERATGEVVRLEVRASQLSADKIQLQGSVSALTRRLKEVEEKAAETMASWSRHTAEGIELSFDMRERLDESLAELFKTATSVEGSRILMRETAALRIIRDELLERNRLLQERYVPWVAQKASLRHVTRIATTATATIDSSASVSGGGERTSAEIECLSRDLREAEENLASAETRLAEFRRECQEMKTKLVDQMEGDKARRDLLAAQHEADVLRAKEELEWSLRMEIEEAVAAHAALGAEHASCAKVIEGLRRRADAAVEVAREELALERQASEGQRIAAESQLLERLEDVKRDSGECQRALERKIEELTDELQECASERARFERELRCAKDSLADGRYVAEDAVRLRARNAALTLEAAGLRERVSALTSELKHLRKGGTAADDERPSNVAAASVASRESRGRSLAAARSVRTAPSLLSSRGASTRRGSAPSVTSRVSALRSTRGSMRRSVGGDDSEAASVAGRSTAAASIATAGTGTRRKSEGKSTTFEIPIGTDSALNAGAAGDDFEARLLDAVGYEPDLDDLFHYETEEEEGVDSVHTRGQLPTEEGTHLGDAASKRVAEVAKLLRTHAVTGRENIARLMEGAGDLSAQSVWAGSSSSRRSGGHAGGVRGGDTEEGEGVGDVHEGSAAGDSRHALGRRELKAALSRAEMELSRLRRELISRTDEVLRLRETRARESASAGPGESIHMRQDSLDELGTTREEGDRSVSVQLAAVALEASDLAAERDELKGRLEMVRDALRLRELAARSRGRHSSRDVDDGAAGAGDGSSGAAAESALGGSSAFAGDAASLPHYVGSNTMDAPRAKAAWKVARHALRMCDAMDSAYSALLGVRRTIDLDRKAFQLGRAKLKEFAARVASAGDVKKAGLEREVSELSLALQREHEHAQALSERHAEEVERLKAEIAELVKSAGRVRADSRKRCEELDKTSAQVTREMAARMREQQRLLERQTGTLESLRALVEGKRMARVAGASALASGAALGAFGDGHVLPRMRSNATASVEDFEDDGVDGEHLSDGGDEVDGGGGSAHGGYVHVDTGDEKTTEGAWEGEGYVKPIAGSVRGSAARSRAPSEAGAVMRGGGVGMRGRRGPGSIGGDSQRGAKETGHIFAALSRHNSNRSLHSNVRAPVSVYGRQDSKAGLPVNDSEMHRDDDEEDGNSTNPGAISAAFGSVASVRTRDDVAAGGEGESGPRAAVPDARRASVPFQRARSMSLDIDEARARADMSEGDAPVLHRQASVAWEVSRESSSNAHAEEGRPGVSAAQVQRVESTSARLRRESAVESEHSDTNREHLLRAIHEAEETSSVASSGKGVNSSSKRGDKGGTANTREVSDKIRGIFAREKTMSMQRSDDTESLNEEEGIDAVAGASGVEGAPVQPSRSNVAEHGVFSRQTSIVPPPLQPTLSRQPSQVQGAVPLLSRRNSVLSQIGGGARSVASVAMSTSSRIAAGGNASPDDLRAVVRHLEGMVLDLQAHIATDEASLKATRVVLAQERENSAELAAKYDAVVARLDSVQAEYARVSTEAQTMQETWHSPEDWAALAERLRACKDALKSTQDDATRKAALIESLRIAASERGARATQLQEAVTKAEERAGQLQADLRRKASAMRSVKERNETAEKELAAEKEARVALEQKLKSANAEAARKDAISRELRVRTMQLESQRDEVQTKREEHARLADEYRKLREELDRREDHLRSAKIKATNAAK # ORIGINAL: g1745.t1 original gene structure, not modified by PASA NODE_993_length_14962_cov_37.3918 AUGUSTUS gene 11222 14925 . + . ID=g1745;Name=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS mRNA 11222 14925 . + . ID=g1745.t1;Parent=g1745;Name=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 11222 11362 . + . ID=g1745.t1.exon1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 11222 11362 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 11518 11617 . + . ID=g1745.t1.exon2;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 11518 11617 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 11871 11938 . + . ID=g1745.t1.exon3;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 11871 11938 . + 2 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 12126 12299 . + . ID=g1745.t1.exon4;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 12126 12299 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 12656 12763 . + . ID=g1745.t1.exon5;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 12656 12763 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 13330 13499 . + . ID=g1745.t1.exon6;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 13330 13499 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 13670 13793 . + . ID=g1745.t1.exon7;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 13670 13793 . + 1 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 14083 14148 . + . ID=g1745.t1.exon8;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 14083 14148 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 14391 14488 . + . ID=g1745.t1.exon9;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 14391 14488 . + 0 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 14686 14783 . + . ID=g1745.t1.exon10;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 14686 14783 . + 1 ID=cds.g1745.t1;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS exon 14921 14925 . + . ID=g1745.t1.exon11;Parent=g1745.t1 NODE_993_length_14962_cov_37.3918 AUGUSTUS CDS 14921 14925 . + 2 ID=cds.g1745.t1;Parent=g1745.t1 #PROT g1745.t1 g1745 MSAKHASEGPIEEPQSKKQKTEDHEPVDYTGDHDLHDKIKEWLQWDKNETTHKAIKDLADRGDYETLVGLLKQRMEFGTAGLRAAMGAGYSRMNDLTIIQTAQGFCRYLEASFSDIKSRGVVVGFDGRHNSRRFAQLTTAVFVSQGIKVLLFSAVTPTPFVPYTVHKYKCAAGVMVTASHNPKEDNGYKVYWENAAQIISPHDKGIADNIATNLAPWVLSWDADAAELSPLRIDPLADVEASYMKDITRHCFRSDLNHKSTIRFCYTAMHGVGMRYVAHACETFKLLPFVPVTEQMNPDPEFSTVKFPNPEEGKSSLDLAIRTANEHNIDYILANDPDADRLAVAQKLSSGQWRILTGNETAALMAWWLWTNHRERHPDVPAD* # PASA_UPDATE: g838.t1, single gene model update, valid-1, status:[pasa:asmbl_5647,status:3], valid-1 NODE_315_length_27128_cov_41.4477 . gene 10873 11971 . + . ID=g838;Name=g838.t1 NODE_315_length_27128_cov_41.4477 . mRNA 10873 11971 . + . ID=g838.t1;Parent=g838;Name=g838.t1 NODE_315_length_27128_cov_41.4477 . five_prime_UTR 10873 10941 . + . ID=g838.t1.utr5p1;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . exon 10873 11347 . + . ID=g838.t1.exon1;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . CDS 10942 11347 . + 0 ID=cds.g838.t1;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . exon 11502 11624 . + . ID=g838.t1.exon2;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . CDS 11502 11624 . + 2 ID=cds.g838.t1;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . exon 11720 11971 . + . ID=g838.t1.exon3;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . CDS 11720 11916 . + 2 ID=cds.g838.t1;Parent=g838.t1 NODE_315_length_27128_cov_41.4477 . three_prime_UTR 11917 11971 . + . ID=g838.t1.utr3p1;Parent=g838.t1 #PROT g838.t1 g838 MGKLRAPKSSYALSIDSPIQPTSEVSAASSLPRRSSKVQKSELRRPLAMRKSITCARTGCDVDGAEAVGQTHKHALILSDDMGHITTEELAVLQELATGDIVAVFGLYSPKNDSDDDVDEWTVSFLAAVTGMGSIDRVKHSRLIVTENEVIWHYCKPAVGRPPVTKTQTFPFEDIHSVNACGVRMVSSLHTIGFTTKAKCVDSATNRSERIKFMCCLPRRDVDFIANTIRYQKDVYDAWAS* # ORIGINAL: g837.t1 original gene structure, not modified by PASA NODE_315_length_27128_cov_41.4477 AUGUSTUS gene 8665 9816 . - . ID=g837;Name=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS mRNA 8665 9816 . - . ID=g837.t1;Parent=g837;Name=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 9492 9816 . - . ID=g837.t1.exon1;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 9492 9816 . - 0 ID=cds.g837.t1;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 9254 9370 . - . ID=g837.t1.exon2;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 9254 9370 . - 2 ID=cds.g837.t1;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 9023 9144 . - . ID=g837.t1.exon3;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 9023 9144 . - 2 ID=cds.g837.t1;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 8665 8742 . - . ID=g837.t1.exon4;Parent=g837.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 8665 8742 . - 0 ID=cds.g837.t1;Parent=g837.t1 #PROT g837.t1 g837 MATSQTLSPHAALSRHPSGSSMRSIEPLLERVPSNVNCSSARPTISGNHIEPVLYDVLTKEELAALQRLVSGNIVAVFGLSKNADMSFGVLPFFIVFMDKLFRAGKRRKCMRYGKIVVTDREVMWYYQEPGRPNTLSVKIIPYYDMKEVKLCKSFFRPYCRVGLKMRKSVRNRTGKLIKLHGGRMDDMDVVVSNIAHYKTLYDRRCSRVCRNL* # PASA_UPDATE: g835.t1, single gene model update, valid-1, status:[pasa:asmbl_5645,status:12], valid-1 NODE_315_length_27128_cov_41.4477 . gene 134 3098 . - . ID=g835;Name=g835.t1 NODE_315_length_27128_cov_41.4477 . mRNA 134 3098 . - . ID=g835.t1;Parent=g835;Name=g835.t1 NODE_315_length_27128_cov_41.4477 . exon 2068 3098 . - . ID=g835.t1.exon1;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . CDS 2068 3098 . - 0 ID=cds.g835.t1;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . exon 1660 1785 . - . ID=g835.t1.exon2;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . CDS 1660 1785 . - 1 ID=cds.g835.t1;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . exon 993 1128 . - . ID=g835.t1.exon3;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . CDS 993 1128 . - 1 ID=cds.g835.t1;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . exon 610 696 . - . ID=g835.t1.exon4;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . CDS 610 696 . - 0 ID=cds.g835.t1;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . exon 134 274 . - . ID=g835.t1.exon5;Parent=g835.t1 NODE_315_length_27128_cov_41.4477 . CDS 134 274 . - 0 ID=cds.g835.t1;Parent=g835.t1;3_prime_partial=true #PROT g835.t1 g835 MFAMGHLRSTIPILLLFCVVRFADSYTSIDLSNGDWKVVNANGSIRAEAQVPGYVHLDLLRQGVIGDPYIGDNELLQRWIAFDNWTYTTSFVASDPLLSERAIFLVLDGIDCVSDVTLNGHLVGSTESMHIRYRFDVSGVLLEGTNQLAIAIKSAAGSAGRKSDDYPYTVPFDVHVGSVPHRNFLRKAQSDFGWDWGPAFVPMGIWKPVSLVGISNAVLESVVVRQDHLPDGSVSINVTALVLSASAGAAGTVNVDLDGSNVGKVSFVSESAGSFSVASASFVVAVPRYWWPVGYGLPNLYVISGTSYCNGETSTVTRRVGLRKVELVQDPAANGADGTMFYFRVNGVPVWAKGANWIPADVFHTRADDTRIHALLQSARDANMNMVRVWGGGIYQPDEFYDFCDEKGLMVWQEFMFACAMYPTDDAFLKLVDVEVAQTLWRLQTHASVVIFGGNNENEQALAWFAESIANRDLYVIDYWRLYIETIRKRLTSIDPDRPFVDSSPSN # PASA_UPDATE: g840.t1, single gene model update, valid-1, status:[pasa:asmbl_5646,status:12],[pasa:asmbl_5648,status:12], valid-1 NODE_315_length_27128_cov_41.4477 . gene 14026 17735 . - . ID=g840;Name=g840.t1 NODE_315_length_27128_cov_41.4477 . mRNA 14026 17735 . - . ID=g840.t1;Parent=g840;Name=g840.t1 NODE_315_length_27128_cov_41.4477 . five_prime_UTR 17601 17735 . - . ID=g840.t1.utr5p1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . exon 17492 17735 . - . ID=g840.t1.exon1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . CDS 17492 17600 . - 0 ID=cds.g840.t1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . exon 17119 17207 . - . ID=g840.t1.exon2;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . CDS 17119 17207 . - 2 ID=cds.g840.t1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . exon 15808 16988 . - . ID=g840.t1.exon3;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . CDS 15808 16988 . - 0 ID=cds.g840.t1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . exon 15293 15649 . - . ID=g840.t1.exon4;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . CDS 15293 15649 . - 1 ID=cds.g840.t1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . exon 14026 15153 . - . ID=g840.t1.exon5;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . CDS 14130 15153 . - 1 ID=cds.g840.t1;Parent=g840.t1 NODE_315_length_27128_cov_41.4477 . three_prime_UTR 14026 14129 . - . ID=g840.t1.utr3p1;Parent=g840.t1 #PROT g840.t1 g840 MVSRGVFAAMFVAGLFVATSARPSATCITTGYRVDCGYVGIQQPECESKGCCWSPSSDGTPWCFNQNPAKATYVVSSSQSTEYGVSLTLALNGPAPQYYSTDISPVGVNIYLETQSRLHVRIFDPNNARYEVPEQFSPRPALPTSKAPTTDYSVVSAAQGEVFWFAVVRRSNGETLFNTSALNGLVFEDQYLELSTQLSNNANLYGLGERVRSLRLDDSLTYTLWTFDTPTPVNDNLYGAHPFYMQHTTAGLSHGVYLRNSNGMDISVRENVLTYRVIGGIFDFYFFLGPTPNDVIRQYADAVAKPHLPPYWGLGFHQCRYGYPNADAISQVVANYAANKIPLDTMWTDIDYMDAYKDFTYDPVNFPMSKMVPFAEQLHKNGQHYVVIVDPGIKTEAGYPAYDAGLKQGVFINDASGKPFVGKVWPGLTVFPDFLAPNANSWWADQIQAFLQLIPVDGLWIDMNEISNFCDGVCSSKDLHPNVKAVVADAEAVPALSSSKSLVNVSYYSTSFDPNNPPYQINNQNSKAPLKSKTLSMDSTHHGGVLEYDVHNIFGLTEAIATNKALEKIQSSRSFVISRSTFPGSGAHTGHWTGDNHASWDDLYYSIPGMLTFQMYGVPLVGSDICGFAQDTTEELCGRWMQLGAFYPFSRNHNAKGQIAQEPYVWASVAAISRNVLATRYRLLPYYYSLFRLANADGSPVMRALFFEFPTDANTFGIDRQFLVGDALLVSPVLTQGATSVSAYFPNGLWYDFYSGALTVNSQGTTLNLAAPMDKINVHVLGGKVIPMQGAALTTRDARSTPFTLLTALDAAGSASGFVYLDDGASLDLTQYFRIDYSVQSSGSAGKLIGTVTYSDCKTALMFQLGDIVILGVSAAPTVVTVNGVQVAAASVAYNATAKSLTISGISVSMMAALAVAWS* # ORIGINAL: g839.t1 original gene structure, not modified by PASA NODE_315_length_27128_cov_41.4477 AUGUSTUS gene 12493 13592 . - . ID=g839;Name=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS mRNA 12493 13592 . - . ID=g839.t1;Parent=g839;Name=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 13547 13592 . - . ID=g839.t1.exon1;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 13547 13592 . - 0 ID=cds.g839.t1;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 13287 13435 . - . ID=g839.t1.exon2;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 13287 13435 . - 2 ID=cds.g839.t1;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 13057 13183 . - . ID=g839.t1.exon3;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 13057 13183 . - 0 ID=cds.g839.t1;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 12493 12962 . - . ID=g839.t1.exon4;Parent=g839.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 12493 12962 . - 2 ID=cds.g839.t1;Parent=g839.t1 #PROT g839.t1 g839 MAARVLFLVALLSLHACCAYAQYANVAYFVGTCLPLASRPTPSKYFSIPTDGTCTWTGIDLLFAKMTYVGNEVSITTGFSSAQCIAGSNSDRNQLAPFNSGDCISLSVWTSGIVTFASTPANTTAMGPTNKYINYNSYYGESNSCSGLIWRGMSTLSYTCIDAVAATFLQYRSYFMFIDPTTNKANVMAYVMAGCDIDFINTSPTVYNSGECKFSWLSYSNTSITDTPMYPTQIYNSGSSAAANSALTAAVAAGLILVSYMWF* # ORIGINAL: g836.t1 original gene structure, not modified by PASA NODE_315_length_27128_cov_41.4477 AUGUSTUS gene 3804 7231 . + . ID=g836;Name=g836.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS mRNA 3804 7231 . + . ID=g836.t1;Parent=g836;Name=g836.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 3804 4077 . + . ID=g836.t1.exon1;Parent=g836.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 3804 4077 . + 0 ID=cds.g836.t1;Parent=g836.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS exon 4251 7231 . + . ID=g836.t1.exon2;Parent=g836.t1 NODE_315_length_27128_cov_41.4477 AUGUSTUS CDS 4251 7231 . + 2 ID=cds.g836.t1;Parent=g836.t1 #PROT g836.t1 g836 MAGVPSPSRGGGGSIKPVVAIRRRSNGGVLSNNGSMEYLGADTAGTASPSASSISSPAHGDVRSASRGSVRNGSAGRRHEGEGRLEMLPSEADAQAADPQAWTSTRDAFGANDGQARGSAGKRILPTVQRRDVDSEPDIAAIQQGIARAVTTEKRQQEMRKQQQQKQQREPSMSDLSTVAATDPPREQRVDAGSLREASTNTQPPKRAVAGGASSRGAKASSVNANVSASDHGEGDAMDDLDSGHYLLAMREKMALFEEQQSKRRQELAGYMRSLFDRPDANGDQLVEMPDDWHDIITRLVDSERTSDRGAGETGAGSRGKGRAGPATRNARVEKTSEVASGVQKQHKGSPSVSNLKEEGVISSNASSMHSGPRRDDDRRGDGDVPKNAPQKAKSTIDSQSGAAAQTQRTSAQHAGTEAKAPSAGGGGGDSSSGTAADGSKDGEQTEMDAKVKKAMDRMRQLDEELADAIKKERETKRRRKEQAAAAAAERADESDKGATSGALVTRSNSNLRDSGSGFGGGVIISDGDDENSDEEVAAATAPLFTTQPTDMSASRSKLGGSTVVHAGAASARTKGASQSKLNADGPSSHSTMGAAGGKAGRAMKEEAAATASTAAAATEVPFAGDPGEPDFVRRNIQLAGDAGSLVAMTEEEKRRLRALIGDGDDSEGEDTDADGKHDASDVASVGNMSRRSRGTKRGAESRTSRADGAESALGSNPFDCGASCAYLNLEDDNPYAISAVPGEGFTPDELLMNQLVAIEEKLKALVPQEEWEAKSIRPPSQRTGSSMSMASSRNTFMTNRTGASEASDRLRLRSMVSSRYVAPPPVAESAQAKMREIDERLAALKHVTEVEHETKPLEPDVLRNLIRDCQMEQLKHKYSAGYGSDYFRPKSELDDEDDRGYSVGGAQVHAQSQPSASGSVQLTPEEAAEKKRQRELKKTLASAVEETIEESGEESGGEDVDAYGYDDDDEDNEGDAADGEGNILDSDGEDTGSNASEDRGELPAPKKSLGSVHFDPNEYVALDADDILNMGVPSRPVSRVLSGKSALRGSADHSHSVSATAANRDDVVISDLSRCNSAMEGHD* # PASA_UPDATE: g841.t1, single gene model update, valid-1, status:[pasa:asmbl_5649,status:12], valid-1 NODE_315_length_27128_cov_41.4477 . gene 18878 26938 . - . ID=g841;Name=g841.t1 NODE_315_length_27128_cov_41.4477 . mRNA 18878 26938 . - . ID=g841.t1;Parent=g841;Name=g841.t1 NODE_315_length_27128_cov_41.4477 . five_prime_UTR 26937 26938 . - . ID=g841.t1.utr5p1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 26406 26938 . - . ID=g841.t1.exon1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 26406 26936 . - 0 ID=cds.g841.t1;Parent=g841.t1;5_prime_partial=true NODE_315_length_27128_cov_41.4477 . exon 25939 26187 . - . ID=g841.t1.exon2;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 25939 26187 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 25408 25512 . - . ID=g841.t1.exon3;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 25408 25512 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 24930 25303 . - . ID=g841.t1.exon4;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 24930 25303 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 24535 24652 . - . ID=g841.t1.exon5;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 24535 24652 . - 1 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 23884 24222 . - . ID=g841.t1.exon6;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 23884 24222 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 23480 23663 . - . ID=g841.t1.exon7;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 23480 23663 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 23158 23346 . - . ID=g841.t1.exon8;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 23158 23346 . - 2 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 22817 22941 . - . ID=g841.t1.exon9;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 22817 22941 . - 2 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 22417 22620 . - . ID=g841.t1.exon10;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 22417 22620 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 22138 22248 . - . ID=g841.t1.exon11;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 22138 22248 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 21883 21978 . - . ID=g841.t1.exon12;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 21883 21978 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 21338 21649 . - . ID=g841.t1.exon13;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 21338 21649 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . exon 18878 21028 . - . ID=g841.t1.exon14;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . CDS 19331 21028 . - 0 ID=cds.g841.t1;Parent=g841.t1 NODE_315_length_27128_cov_41.4477 . three_prime_UTR 18878 19330 . - . ID=g841.t1.utr3p1;Parent=g841.t1 #PROT g841.t1 g841 GDDDAEGASKQSGDNYVRILDILKRLTQLCTATVVKPAKPASLADRLMKKHRKSDGRARALSISGSYNDLLEQISDPMSKTHNSENQRLLRNLGAHTQVIDLLKIATDLHDERMREVFIIAHVFLQSFCLRNEQNQAILHKYIDFFMDEMTKHAFAGQTINYIFVNNSTLCGSISEKVIQHFVGCLESQGRYVPHLEFLKNIVRVGGQCFRKSQDMVMQALLTAGEDVLVFYNDHNSFQQLRSLMTDKSPVTDPDVSELQYHIALIQLLAYCTEGKNANTEIKCQSLLALEDIVKVINCKEADSKVRAAYVDLLNHTYADTEVEVKEIAGSQHVWSLIKSFLADIRAASSPLYAGDDLDLNHYISRSVLHSLILFFTNQLASSVHNMAASAPPSSAPAVSVVTLQNLIGEVLEAVYNLAKCEWWEASERPQTESCLRQLYEAAKTENVQLSDELTLGIQEWLSTKHSTKKAADKFVERIRKKKERQLAELQTSDLEAAEARTIVEGLHGYVSEIEDEMKMLMEAEFSVLVEILQHPHRLITASSHVPSARLIEKLVSHMRILGDREKMLCVQVLATLRRMMSPVAFSARAERLRHATFRLFFGDAILEPIVTESTQNDLDKNGASNLVIDLIIGNDDPMVFLESIRLGIALLEGGNTRIQQSFYARFGHSGSEAFFRQIHNRMHHSMNELISGYNTIKGDKGDDITMSITLTAVDFTCMQAILRFLQLLCENHNLNLQNYIRKQQTSRTSYNLVEETFKYLDCICGSTSGGVGLLGLYINENNCSIINQCLITLTEYCQGPCHENQECIANHDTHGLDVVLGLIVNDINPLAKDRIDLVLELKHNASKLLLSVLESRLTSDLADKILFNLDANQLVTALNTIHGWAGTVRKRVTQERVHEIGHTVYMLAHRLAQTSPTLSHLLRANHANTTAAVKYYAARTGQIQIARDNRLEVICFPIPEICEFLTEESKTDIVMNAKRDEQGSKVAGFFARTGDLYLEMMWQSRLQKSKILYRFARNIQRWKTMSFTISLMINILMVILFPIDPVVLEGGAVGEFADSIAEAVVGAAASALLNTTDAISGLPSSSSPGGTTYGSAARRTAAMAAAKAAAAAARGADWLRLVSPWMFMALGVAQFSMALVVLVSYLSNYGTLLRKKNRLTKDVALVYHIGYLCVCFSGMVFSPFLYALLLLDIIVREETLQNVIRSVTRNGKSIVLTTIFALIVIYMFSIFGFLYLRDDFLIDTESVGPERSCDTMLHCIITTLNLGLRNGGGIGDVLVQKSKDEPLYFVRIFYDLLFFFIVIIIVLNLIFGVIIDTFADLRAEKNEREENRKNTCFICGLNRSAFDNKAMTFEEHIRVEHNLWNYLYFIVHLRKQERTEFNGQESYVSNMIAVNNLDWFPRMRAMSLITDTEETDQNDIRSLKTQLGAALDLLSALALDVSVLRDHFGEQKKQLRLNSIKRSNLSVDDDSSFISGDAARGTRRRSSNVPPTYTIIPSTSTPPLTFITSESPIVSPPSSNVHSPTSSQNPIVITKPCSTESHV* # ORIGINAL: g2693.t1 original gene structure, not modified by PASA NODE_5554_length_802_cov_59.3534_potentialcontaminant AUGUSTUS gene 1 367 . - . ID=g2693;Name=g2693.t1 NODE_5554_length_802_cov_59.3534_potentialcontaminant AUGUSTUS mRNA 1 367 . - . ID=g2693.t1;Parent=g2693;Name=g2693.t1 NODE_5554_length_802_cov_59.3534_potentialcontaminant AUGUSTUS exon 1 367 . - . ID=g2693.t1.exon1;Parent=g2693.t1 NODE_5554_length_802_cov_59.3534_potentialcontaminant AUGUSTUS CDS 1 367 . - 0 ID=cds.g2693.t1;Parent=g2693.t1 #PROT g2693.t1 g2693 MESTEGLSAADKALFDVLTCLTLDGDAGYSSTSTMSSSGSSKRKREEVVFSDDEEANAKDYWETKMSYGKRIRLGIKNEPVIFTKIGRSVRPPMRYCPIPEYGVKYGDEKDLSDDECSVHSV # ORIGINAL: g7696.t1 original gene structure, not modified by PASA NODE_3099_length_4323_cov_42.617 AUGUSTUS gene 3818 4323 . + . ID=g7696;Name=g7696.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS mRNA 3818 4323 . + . ID=g7696.t1;Parent=g7696;Name=g7696.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS exon 3818 4323 . + . ID=g7696.t1.exon1;Parent=g7696.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS CDS 3818 4323 . + 0 ID=cds.g7696.t1;Parent=g7696.t1 #PROT g7696.t1 g7696 MGAATTQGLSACKSQTFTVDIVAKATENKILAPIDTEISFAGFVAHVVKSSSTYTRVLFVIALACATICGAGLPIFSILFGQITQTLNGDVNQISGKMWKFTVYFVALGAGTAILTFVYIKLLLRNAAKTTLTMRTDFYRSVLKQETHFFETAQTARIIDRLGNDGHT # ORIGINAL: g7694.t1 original gene structure, not modified by PASA NODE_3099_length_4323_cov_42.617 AUGUSTUS gene 505 1902 . + . ID=g7694;Name=g7694.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS mRNA 505 1902 . + . ID=g7694.t1;Parent=g7694;Name=g7694.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS exon 505 897 . + . ID=g7694.t1.exon1;Parent=g7694.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS CDS 505 897 . + 0 ID=cds.g7694.t1;Parent=g7694.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS exon 991 1902 . + . ID=g7694.t1.exon2;Parent=g7694.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS CDS 991 1902 . + 0 ID=cds.g7694.t1;Parent=g7694.t1 #PROT g7694.t1 g7694 MNQSGDHPVTRATYVRGAAMLAAANAWQMAVHAPSHWIAKTIGGKEAVLPADIDAQLASDAGCALICTIMEDPSLAEAVERIGEDGALSAVFRINLARASRIKGAPAEALDCETVVVKTGPSAFLSRLACLIGRHGKSERELPAYFSRRAKDASDPFASFFANFAAHVHCGWYSMWTGSYMIVIEDLAKARWVDFEEGPTFADACTAIDTLATMHAAFWGIGNEELAWIRTPAEMDIIADLAAEAWPTFEARFRGTAHWRDEVGTVGSRAMRQKTFRALSARMSVRRTLVHGDYRTSNIAFDVGVVKRHHEGAHAAENERRPCVVFDWQNAYKGCGALDLEHFIVESLPCDMRRQHGEALLKRYHATLVANGVCNYSYEECKMDFRYAVAYNLHRVVLGLKFNNYTPSGWRQFLANVERTGDALAEYACADIVA* # ORIGINAL: g7695.t1 original gene structure, not modified by PASA NODE_3099_length_4323_cov_42.617 AUGUSTUS gene 2334 3152 . - . ID=g7695;Name=g7695.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS mRNA 2334 3152 . - . ID=g7695.t1;Parent=g7695;Name=g7695.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS exon 2334 3152 . - . ID=g7695.t1.exon1;Parent=g7695.t1 NODE_3099_length_4323_cov_42.617 AUGUSTUS CDS 2334 3152 . - 0 ID=cds.g7695.t1;Parent=g7695.t1 #PROT g7695.t1 g7695 MRKKGANSEDKHAAKNAPIFNSKADADAPGLYDALWNEMKRRRDTLLSSPLWTKQGSRAGGATISTLYVDDQYPDIPYIRCEATLNCPVDVAARYICLEDHLWMWEWDPTCMQSTFAVPSALSKMHSEHEKLLFLRTRSFVHPLVYNRNFVYWHNSEWIEPGRRFFSSNTSDCDAARLATDPDQYRFLRGDVFYAFKEFTAIDATTCRYVAVMRTDTKGLLPWGIVTKATVKNLMDEVDIMIQKKCRWDYFEEEKTTGSNINAGRRRGSQAG* # ORIGINAL: g2607.t1 original gene structure, not modified by PASA NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS gene 6010 6882 . - . ID=g2607;Name=g2607.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS mRNA 6010 6882 . - . ID=g2607.t1;Parent=g2607;Name=g2607.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS exon 6010 6882 . - . ID=g2607.t1.exon1;Parent=g2607.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS CDS 6010 6882 . - 0 ID=cds.g2607.t1;Parent=g2607.t1 #PROT g2607.t1 g2607 MEQLNGIDLLLQGKLGTDFDQTVTWIDDMSTTGVTTMRTPEVDADPQIDNGMPEEETTMRTPEVDADPQIDNGMDEMTADAGVPQTSTIVTVGSFSFGPGDAVMIKVDNDEPNMCEQPALVSDVKTDRKTGDKLIVVEWLYGRNESVIAYPQPLVKSHACFSTQELFRSNHVQTVHVNTVNGPCRVQSIQGFLRSDPFSRQFFTRTSIRIRRDKTAVVCGISKISCLGCRKIVNPDKASVENVTVLCTKCNRLSHMACIQRRQTHRPAPTCKSTKYNSFCCDCEKYHLTA* # ORIGINAL: g2606.t1 original gene structure, not modified by PASA NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS gene 1686 2255 . - . ID=g2606;Name=g2606.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS mRNA 1686 2255 . - . ID=g2606.t1;Parent=g2606;Name=g2606.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS exon 1686 2255 . - . ID=g2606.t1.exon1;Parent=g2606.t1 NODE_1804_length_9151_cov_21.4173_potentialcontaminant AUGUSTUS CDS 1686 2255 . - 0 ID=cds.g2606.t1;Parent=g2606.t1 #PROT g2606.t1 g2606 MESTEGLSAADKALFDVLSCLTLDGDPGYTSTSTMSSSASSKRKREDVVFSDDEEANAKDYWETQMSHGKRIRLGIKNDSVIFTRIGRSVRPPMRYSPIPVYGVKYCEEKDMSDDECSVHSVDTASVANTEDQGFVSYDDEDEDDSDDDFQSYLSSGTSVSDSDGEYQSDWSNEEEEEARTAAPPRHKC* # PASA_UPDATE: g10645.t1, single gene model update, valid-1, status:[pasa:asmbl_149,status:12], valid-1 NODE_103_length_39779_cov_40.308 . gene 32331 34360 . - . ID=g10645;Name=g10645.t1 NODE_103_length_39779_cov_40.308 . mRNA 32331 34360 . - . ID=g10645.t1;Parent=g10645;Name=g10645.t1 NODE_103_length_39779_cov_40.308 . exon 34294 34360 . - . ID=g10645.t1.exon1;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . CDS 34294 34360 . - 0 ID=cds.g10645.t1;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . exon 33906 33995 . - . ID=g10645.t1.exon2;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . CDS 33906 33995 . - 2 ID=cds.g10645.t1;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . exon 33331 33472 . - . ID=g10645.t1.exon3;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . CDS 33331 33472 . - 2 ID=cds.g10645.t1;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . exon 32981 33056 . - . ID=g10645.t1.exon4;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . CDS 32981 33056 . - 1 ID=cds.g10645.t1;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . exon 32331 32720 . - . ID=g10645.t1.exon5;Parent=g10645.t1 NODE_103_length_39779_cov_40.308 . CDS 32331 32720 . - 0 ID=cds.g10645.t1;Parent=g10645.t1 #PROT g10645.t1 g10645 MKNRRDFDERAFTVGVGGPVGSGKTALLLALCRLLSPTHNMCVVTNDIFTKEDGEFLLRNNALEPSRIRMVETGGCPHAAIREDISANLLMVEDLTAQFGPEFVLLESGGDNLAANFSRELADFTIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAGAVGADLGVMSRDAARMRQGGPTVFAQCKHGVGVENIASQVLAALDAARRASHALGAMQQADTHAHAHAHAHAHAHTHAPSDESYHSAAGRVFTV* # PASA_UPDATE: g10646.t1, single gene model update, valid-1, status:[pasa:asmbl_150,status:3], valid-1 NODE_103_length_39779_cov_40.308 . gene 35355 39182 . - . ID=g10646;Name=g10646.t1 NODE_103_length_39779_cov_40.308 . mRNA 35355 39182 . - . ID=g10646.t1;Parent=g10646;Name=g10646.t1 NODE_103_length_39779_cov_40.308 . five_prime_UTR 39001 39182 . - . ID=g10646.t1.utr5p1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 38654 39182 . - . ID=g10646.t1.exon1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 38654 39000 . - 0 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 38232 38457 . - . ID=g10646.t1.exon2;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 38232 38457 . - 1 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 37939 37995 . - . ID=g10646.t1.exon3;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 37939 37995 . - 0 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 37368 37508 . - . ID=g10646.t1.exon4;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 37368 37508 . - 0 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 36985 37118 . - . ID=g10646.t1.exon5;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 36985 37118 . - 0 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 36314 36676 . - . ID=g10646.t1.exon6;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 36314 36676 . - 1 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 35862 36033 . - . ID=g10646.t1.exon7;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 35862 36033 . - 1 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . exon 35355 35508 . - . ID=g10646.t1.exon8;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . CDS 35389 35508 . - 0 ID=cds.g10646.t1;Parent=g10646.t1 NODE_103_length_39779_cov_40.308 . three_prime_UTR 35355 35388 . - . ID=g10646.t1.utr3p1;Parent=g10646.t1 #PROT g10646.t1 g10646 MHRLRVPCIRRRNCVRFLLLAIILSVVAFTSVGILEGMKKSASASTSSASDAEDSLIAANRVKRLEAELASVEENVRAVEERLKAAQLNRPPVDGDANDDSTHDDDDMRDAADADAYEMLQMQNNAVDANNAGEGGASESQSEDAVWRARFHETDAAKLREYVEALNGAQTVRNRQRFPSRPPDGPVVVIQVHDRPQYFRLSIESLRNARGVENALIVVSHDYWNADMLEITWSIDFAQSIAIFMPHAMQLHPDSFPGTDPKDCPRDLTRSEARQAQCNNAEYPDMYGHYREAPFAMTKHHWWWKANFVFTALQAINGRDSPVVMMEGDHVVSPDFFEALDKAQALKKAECSDCGVITMGTYDAPVSGVPRSAARMFAWRSSEHNMGMVLDRASWSDIASCADPFCTYDDYNWDWTLQYLGTLCLSRTRLRGFSAIVLSLPRIFHIGSCGMHKKSGTCDPTADMDALRVRFQGSEYRTPITEMRLDRTNDVRMSHVGSPNGGWGDKRDHDLCRRTLVAH* # PASA_UPDATE: g10642.t1, single gene model update, valid-1, status:[pasa:asmbl_148,status:12], valid-1 NODE_103_length_39779_cov_40.308 . gene 4219 15820 . - . ID=g10642;Name=g10642.t1 NODE_103_length_39779_cov_40.308 . mRNA 4219 15820 . - . ID=g10642.t1;Parent=g10642;Name=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 15751 15820 . - . ID=g10642.t1.exon1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 15751 15820 . - 0 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 15331 15630 . - . ID=g10642.t1.exon2;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 15331 15630 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 15081 15155 . - . ID=g10642.t1.exon3;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 15081 15155 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 14789 14881 . - . ID=g10642.t1.exon4;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 14789 14881 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 14528 14608 . - . ID=g10642.t1.exon5;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 14528 14608 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 14191 14280 . - . ID=g10642.t1.exon6;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 14191 14280 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 13878 13970 . - . ID=g10642.t1.exon7;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 13878 13970 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 13659 13736 . - . ID=g10642.t1.exon8;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 13659 13736 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 13305 13418 . - . ID=g10642.t1.exon9;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 13305 13418 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 12860 12931 . - . ID=g10642.t1.exon10;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 12860 12931 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 12458 12535 . - . ID=g10642.t1.exon11;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 12458 12535 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 12093 12170 . - . ID=g10642.t1.exon12;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 12093 12170 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 11824 11895 . - . ID=g10642.t1.exon13;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 11824 11895 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 11382 11474 . - . ID=g10642.t1.exon14;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 11382 11474 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 10720 10818 . - . ID=g10642.t1.exon15;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 10720 10818 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 10396 10470 . - . ID=g10642.t1.exon16;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 10396 10470 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 9958 10038 . - . ID=g10642.t1.exon17;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 9958 10038 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 9426 9506 . - . ID=g10642.t1.exon18;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 9426 9506 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 9145 9222 . - . ID=g10642.t1.exon19;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 9145 9222 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 8714 8815 . - . ID=g10642.t1.exon20;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 8714 8815 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 7729 8502 . - . ID=g10642.t1.exon21;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 7729 8502 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 7222 7388 . - . ID=g10642.t1.exon22;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 7222 7388 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 6975 7009 . - . ID=g10642.t1.exon23;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 6975 7009 . - 0 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 6366 6759 . - . ID=g10642.t1.exon24;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 6366 6759 . - 1 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 5845 6075 . - . ID=g10642.t1.exon25;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 5845 6075 . - 0 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 5450 5582 . - . ID=g10642.t1.exon26;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 5450 5582 . - 0 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 4898 5172 . - . ID=g10642.t1.exon27;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 4898 5172 . - 2 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . exon 4219 4561 . - . ID=g10642.t1.exon28;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . CDS 4388 4561 . - 0 ID=cds.g10642.t1;Parent=g10642.t1 NODE_103_length_39779_cov_40.308 . three_prime_UTR 4219 4387 . - . ID=g10642.t1.utr3p1;Parent=g10642.t1 #PROT g10642.t1 g10642 MAAKWTHCILVYIAACVLLEVDAGILYASPANISSTLTQVSAGDSLVLTAGNYTGGWSVPVEGVSVEGVGASATFVVCDGTVASIGLAISSNNLASISKMTFTKCGRAVVANGTLSLDSVVLTGNHQAIACASGNRACVFDVHNSVISKSKPFTAVTIHLFELSGVGRINATFTATTFSENIDYLGIIASVVDANAYVQVTDCVVRDNPRSTLLTSAGFANIQSGMQLTVRGTRFLGNKLNTLIGTPSTLGVSATPSHVVVDNCEFIGNSADVNGMFYFTHTNTLLITNSVLRDNGGEAASENLLRRLMIIARDSAAPDAFVVTVRNVTFENNYIQSGMTLDRYGTLLVEDCQFKNNTVENLISSLTGLESSFVMRRCNLSRTSGTQGTIISTDLQITGLVHDSTFADSSVNTLVSVSKSGILVVDNCVFRGNTAYTTIFSVAGDISNNYVASLLLRNSTITGNAGIASNATEFTGVIAKLGDSSLTTIRSSVMSGNKDRSMITAECNSCSLSVMNTTISDNYGIESGTVVRISQTATATLFGSVFTGSNTTLVGGAVNIDGSAQVTVTSCLFENNHALEGGAIYVASRAQLTVANSTFKGNLASTDLYGNRGLGGAIRGSETVRMAITRTIFVDNTAMRLGGAVSLSGRTSWSISRCLFASNQANGDYGGALHSERHTNASIDRTTFVSNTAAFGGGALFVLRRSSADPITLNDSSFLGNVAVEGAAVYSMPPMDRSVTSSSTFSGNVATFRGNVIASPPVRLGWRTVPTKTTFYSGDTTESLQIAQIDGYGNVVTNSEDNTMSVKVHITPDGAQAVGEAQLAVFDGEAQFEPFAIAGLPGTYMLIVASSRSIYNPAEFSVSVPIVILPCPTRVLIKDGFDYPVCDTGVASGRVPVDVIVGVIVPIFVVTAVVIGIWYRRSTAEILRKERTWLIDVQDLNVAEIIGQGAFGKVYKGTYRGGIVAVKTILVQYSGSASVAAGLVSRMRILSRAANRRGSLFASSEAISNVPPVQATSSGAVQKSLYRTLSGASEGSAQKISRTISKGKMSATQTRTLKKEQIKAHQEAVDSFLQEVQTMCSLRHPNIVLFMGACIKDPDLCIVTEFMSNGSLVDLYDRPAVKFDWKLRINFAIDAASGMTYLHSATPPILHLDLKSPNLLIDDRMRLKVADFGLAMLNSMRPLEETRGTLLWMAPEVIRQLSVDEKADVYSFGIILWELIGRRLPYYYCTKRVCNRAQFARRIAYGNVRPRPLPARLPGPFAMLMTRCWDANPVIRPSFPEICSFLEKMEADEWPEPNIPAFAKGDPTSDFSNDFRALEERSESQMDLPPGNDEIAEELEVSGDDDDFGFDTHIPGMMPRV* # ORIGINAL: g10644.t1 original gene structure, not modified by PASA NODE_103_length_39779_cov_40.308 AUGUSTUS gene 28653 31672 . + . ID=g10644;Name=g10644.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS mRNA 28653 31672 . + . ID=g10644.t1;Parent=g10644;Name=g10644.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 28653 30119 . + . ID=g10644.t1.exon1;Parent=g10644.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 28653 30119 . + 0 ID=cds.g10644.t1;Parent=g10644.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 30410 31672 . + . ID=g10644.t1.exon2;Parent=g10644.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 30410 31672 . + 0 ID=cds.g10644.t1;Parent=g10644.t1 #PROT g10644.t1 g10644 MMLSGASPSAINFYNQLHALKQRQQSPAKQDQFTHPTYGSSGGVNGAGGAVNHGAVHVTPSSESGGHPPGPSLSAMLGHGPPTVLPGHSLPSHQPRRFSNPDLFNSSAPPSNSSAAVAVSRECRRLPVLVQGGLPAAAPGAPTVENGTHGSQYATSLQQHLLMQQQLLVNGVLGQQQQQQQQQQQHLLQQQQALARTASAPLPSSRHGQQVALNSRTLSHPPGTKAKASGQSKKGESKKQQQQQQQQQQQQHQQHQQHQQQQQQQQQEQQRKAPKRDKKRSKSVPTQKNVGLADLLDDEHFKALLEGDLGGLREMVIMGAGEDGVSLRHDIEGSLAAAGIDCEQSIARVPGTQTDVSPVDSDISMSAHDGSAGGTAFKQSPHLSPVHSVSGEIKPELEVGIGGASETNDTPRVSTTNGGVIKGRRLSVSKDRRKSINGGSVAVAAAAAAQAAAAAAVGSSVQNIEAGSAGSHIKRPMNSFMVWAQMMRKELTQKHPDLHNAEISKRLGEMWKELPESDKQPYVERAQALKQLHEQEFPYYKYRPRRKSSKGGPSSETETSNGTDGMGTTDESPERNPHDGHVSHYLPVPGLVCAADTPGSVHHSMGGDMVGDMGGGGMMCSDVPQQHIIAALPSFFGSSSGHPLGFESMDGPSHDMSSYISAEQEAQMSIHKQIAQHQQQQQQQQQHRQQQQQQQHVQQQQLQLHHHMMQQQHNQLQQQRCFMWPEGELEIDSSHSQSGDVGILLASHSPRLPGDRQQLQLHHHHHQHQQQQQHQQQQHQQQQAHFASPYPSGNTPVLNASGLGMLGNAHDQSQAGRMSSAPSLFDGYMYDAGGAGKDDDYVSMQFGGLGADDVGIMGHDDHHDMMSLHSGSALGQAFPCSLDDQFAWLNSAQCNSVSMAMASAAAPDN* # ORIGINAL: g10643.t1 original gene structure, not modified by PASA NODE_103_length_39779_cov_40.308 AUGUSTUS gene 19908 24278 . - . ID=g10643;Name=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS mRNA 19908 24278 . - . ID=g10643.t1;Parent=g10643;Name=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 23907 24278 . - . ID=g10643.t1.exon1;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 23907 24278 . - 0 ID=cds.g10643.t1;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 23225 23677 . - . ID=g10643.t1.exon2;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 23225 23677 . - 0 ID=cds.g10643.t1;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 22825 23019 . - . ID=g10643.t1.exon3;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 22825 23019 . - 0 ID=cds.g10643.t1;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 20566 22393 . - . ID=g10643.t1.exon4;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 20566 22393 . - 0 ID=cds.g10643.t1;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 19908 20311 . - . ID=g10643.t1.exon5;Parent=g10643.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 19908 20311 . - 2 ID=cds.g10643.t1;Parent=g10643.t1 #PROT g10643.t1 g10643 MAAGGSQSFDTHSNQVLSLSVDDFVPGHPTLDSFSKKLLESLVDSTRRSNALPEAGDDYQFYDSFPQFRRLMEGVGARLLNGMQQLLRQERPEDVPNFSTALGADDDEARFDKIVDAVDSVLEKVDVMLDEVSGVSKNARPVLPAGAQQSPALIARLTPKGSRLDYSLVHAKNIKRPQLRFEDKIDNSNVPFVPHPLAKTHDYGVPPHSRGPSPDRDVVPPHIQSHIRGLGISSDDGGIVPGGYPHPFQLELEGWKPTAEQLEVGEERVPLSLEQVPCTWVDTPALLDSLARKLEMVGEFAVDLEQHSYRSFQGIVCLMQISTRDEDFLVDTLELRSHLQGALHKAFTNPRIVKVLHGADSDIVWLQRDFGLYLVNLFDTGQAARVLDFPSFGLAHLLKSYCNVNADKKYQLADWRMRPIPAEMLRYAREDTHYLLYIYDKLRTELIMRGGANKNLLMSSLNRSRDICLKRYEKELLTETSHLHLYARYSRPLSSQQLAVLKAVYAWRDRVSRDEDESTRYVLPNHMMFAIAEAMPSEQSGIIACCNPTPPLVRVGAADLVVAIQKAKESVPIDALPPPPPQQVAQQVGVDLSGPYGAAQLITTAPPSVPGQSANTLGPQPTSGAQSHAAIVTAQQLFQFAGWVANPPTDAAAGVTIVAASGDSGVVAMDTDAGALEEFAEEDGIVSNGLFQVGASIPAGQIGSGSAAGAESRAVARGIHGSFESPLAHVHPRTVSAAGPSTNTSSATSAAVSSTAVVAAGAPGAESAFGGEGDGAVPAKPPTPMGQREPRSYSEIYQLSNMNRKRNKEKKRLKEDSFAMPLSPLTLENGGSGGMTRSSANNSTNSLNAIGLPTTGTHSRERSGSDPSMLEAGDDHGPAGVPKPAEGEDVNAFMRRIGWNASGAAPHAGGQSRHDGTAGGALAGSAAVANAANAAIAGALSGGMKTAAGGIRGGNGSSSAPGSKPIGKRIPDGTQFVPYDYNAVNAQGGGIDSRPLNAQAPVFNPYSETIEPKRTGRVRSNVRPKSGQRSVTYGAGSGVGGGAGGSMGPQGGAGIGGPGGIRKPKEGGNVSHQKWMAQQQQKR* # ORIGINAL: g10641.t1 original gene structure, not modified by PASA NODE_103_length_39779_cov_40.308 AUGUSTUS gene 111 3908 . + . ID=g10641;Name=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS mRNA 111 3908 . + . ID=g10641.t1;Parent=g10641;Name=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 111 406 . + . ID=g10641.t1.exon1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 111 406 . + 0 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 638 823 . + . ID=g10641.t1.exon2;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 638 823 . + 1 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 1038 1226 . + . ID=g10641.t1.exon3;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 1038 1226 . + 1 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 1502 1566 . + . ID=g10641.t1.exon4;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 1502 1566 . + 1 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 1746 1828 . + . ID=g10641.t1.exon5;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 1746 1828 . + 2 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 2128 2290 . + . ID=g10641.t1.exon6;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 2128 2290 . + 0 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 2531 2781 . + . ID=g10641.t1.exon7;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 2531 2781 . + 2 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 3088 3131 . + . ID=g10641.t1.exon8;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 3088 3131 . + 0 ID=cds.g10641.t1;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS exon 3305 3908 . + . ID=g10641.t1.exon9;Parent=g10641.t1 NODE_103_length_39779_cov_40.308 AUGUSTUS CDS 3305 3908 . + 1 ID=cds.g10641.t1;Parent=g10641.t1 #PROT g10641.t1 g10641 LNPATPVTPASATRARADSLDDGDKAKAPAVLVADGGLMSKEERATGTVSLSVYKRYFVAISIPMLVLLITLFVLSRGSMMSTDYWLSLWSSATDANVGYYLGGYAGLSVGALLLSLVLSLLVAYAGIRASRVLHENLLERIARAPMSFFDTTPVGRVLNRFSSDTSVVDQQLSQTLQSLTDRFVAILGTLILQVVVTPFFAAALVPILIAYYFLQRYFRCTSRELQRIDSITKSPIFAHFSETFGGLQTIRAYRSQGMFVDSVVTKINRNVTCFLFLNTANRWLGVRLETIGALIVYASALFSLIGKNSIDPSLVGLSMSYSLTITMYLNFFVRSLADAEMQMNAVERMGYYSEIDVEPFEEELYEPTAPNAARIPQQWPASGSVDLVALSARYRPGLPLVLKNISASIKSGERVGIVGRTGSGKSSITLALFRMFDLCAGRIEIDGVDIARVPLSRLRSSISLVPQDPVLFAGSVRRNLDPGDEYTDEAIHSALASAQLTRTVSTLQDGLNHRVEEGGDNFSVGQRQLLCLARAFLRRSRILVMDEATASVDRDTEIAMRDVISQGFEGVTLLIIAHRLATVMDCDKVMVFADGELAEFGHPRELLTISGGKFRALVDSSGSKH* # PASA_UPDATE: novel_model_1_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_151,status:3], valid-1 NODE_103_length_39779_cov_40.308 . gene 18187 19299 . + . ID=novel_gene_1_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_103_length_39779_cov_40.308 . mRNA 18187 19299 . + . ID=novel_model_1_5b6be656;Parent=novel_gene_1_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_103_length_39779_cov_40.308 . five_prime_UTR 18187 18531 . + . ID=novel_model_1_5b6be656.utr5p1;Parent=novel_model_1_5b6be656 NODE_103_length_39779_cov_40.308 . exon 18187 19299 . + . ID=novel_model_1_5b6be656.exon1;Parent=novel_model_1_5b6be656 NODE_103_length_39779_cov_40.308 . CDS 18532 19197 . + 0 ID=cds.novel_model_1_5b6be656;Parent=novel_model_1_5b6be656 NODE_103_length_39779_cov_40.308 . three_prime_UTR 19198 19299 . + . ID=novel_model_1_5b6be656.utr3p1;Parent=novel_model_1_5b6be656 #PROT novel_model_1_5b6be656 novel_gene_1_5b6be656 MAAMAAERRLRDNVWCGVHGDGSADNNTNDDDRVADAPQKRAISKEKKQESNSLGGRQAMRGTVLLDASAPRVVTGGGNNATAATGGHVGGRGGDGVPSAYTSAAVRADTAVGMKTIERVSGAMPVDPGRKRTHVPSVGVIVLDQDVDNLRNKRLRCDTNTNDWPCGMCTFVNSGVDGSRACAVCGTARDLSNGDRLWSCAHCSAANASQSLTCCVCENVR* # ORIGINAL: g3586.t1 original gene structure, not modified by PASA NODE_4785_length_1247_cov_342.613 AUGUSTUS gene 1 1215 . - . ID=g3586;Name=g3586.t1 NODE_4785_length_1247_cov_342.613 AUGUSTUS mRNA 1 1215 . - . ID=g3586.t1;Parent=g3586;Name=g3586.t1 NODE_4785_length_1247_cov_342.613 AUGUSTUS exon 1 1215 . - . ID=g3586.t1.exon1;Parent=g3586.t1 NODE_4785_length_1247_cov_342.613 AUGUSTUS CDS 1 1215 . - 0 ID=cds.g3586.t1;Parent=g3586.t1 #PROT g3586.t1 g3586 MPFGLKNAPAAFQRCMDLVLAGLTWQSCLVYIDDIIIFAPTFEEHMARLRAVLDRIRAAGLTLRGVKCNFAQSELPFLGYVVGSDGLALNPAKTTKVLHMPAPRNASDVRSFLGMTQYYRKFIEKYAQIATPLTELTKKDTAWTWTTHEQLAFDRLKHALTSAPVLAFPSFDPAHKFRVRTDASKHGLGAVLEQQQHDTSWRPIAYESRKLHVSERIWTTQEWETLAILWALQQFRPYLHGRKFSLQTDHHSLKWLLTTNHQNRRLERWVAALGEYDFDVDHIPGKSNNTADHLSRTPVGDAPDDLDDFLPTNILEVHAIHATEQPHPALSDIEHELAYLLTDPTFAADLSRAQHDDPSCKKWLTKLSYSPTSSQILDRDKRLSLSTDAYAAPYPMETLMDVQQG # PASA_UPDATE: g449.t1, single gene model update, valid-1, status:[pasa:asmbl_4013,status:12], valid-1 NODE_2309_length_6770_cov_44.5813 . gene 163 2576 . - . ID=g449;Name=g449.t1 NODE_2309_length_6770_cov_44.5813 . mRNA 163 2576 . - . ID=g449.t1;Parent=g449;Name=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 2459 2576 . - . ID=g449.t1.exon1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 2459 2576 . - 0 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 2238 2255 . - . ID=g449.t1.exon2;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 2238 2255 . - 2 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 2023 2105 . - . ID=g449.t1.exon3;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 2023 2105 . - 2 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 1656 1893 . - . ID=g449.t1.exon4;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 1656 1893 . - 0 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 1232 1312 . - . ID=g449.t1.exon5;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 1232 1312 . - 2 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 917 1002 . - . ID=g449.t1.exon6;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 917 1002 . - 2 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 633 788 . - . ID=g449.t1.exon7;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 633 788 . - 0 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 412 495 . - . ID=g449.t1.exon8;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 412 495 . - 0 ID=cds.g449.t1;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . exon 163 256 . - . ID=g449.t1.exon9;Parent=g449.t1 NODE_2309_length_6770_cov_44.5813 . CDS 163 256 . - 0 ID=cds.g449.t1;Parent=g449.t1;3_prime_partial=true #PROT g449.t1 g449 MEKSFVASVADVLKHFNVKEDEGLADARAEKDLAKYGPNELPAEEGTPLWKLILEQFEDLLVQILLAAAAISFVLAFFEEGHEQFTAFVEPFVILLILIANAVVGVWQERNAENAIEALKAYESEFAKVVRSGRVQKIPARELVPGDIVEVAVGDKVPADIRVIAIKSTTLRIDQAILTGESLSVLKVTEAINDKDAVNQDKLNMLFSGTTVSSGSGRGVVIGTGVNTEIGKIRNEMVATETEKSPLQKKLDEFGEMLSKVIGVICLAVWLINIGHFSDPVHGDSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLAL # PASA_UPDATE: g451.t1, single gene model update, valid-1, status:[pasa:asmbl_4014,status:12], valid-1 NODE_2309_length_6770_cov_44.5813 . gene 4827 6728 . - . ID=g451;Name=g451.t1 NODE_2309_length_6770_cov_44.5813 . mRNA 4827 6728 . - . ID=g451.t1;Parent=g451;Name=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 6611 6728 . - . ID=g451.t1.exon1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 6611 6728 . - 0 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 6352 6509 . - . ID=g451.t1.exon2;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 6352 6509 . - 2 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 5970 6078 . - . ID=g451.t1.exon3;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 5970 6078 . - 0 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 5622 5788 . - . ID=g451.t1.exon4;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 5622 5788 . - 2 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 5353 5511 . - . ID=g451.t1.exon5;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 5353 5511 . - 0 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . exon 4827 5083 . - . ID=g451.t1.exon6;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . CDS 5006 5083 . - 0 ID=cds.g451.t1;Parent=g451.t1 NODE_2309_length_6770_cov_44.5813 . three_prime_UTR 4827 5005 . - . ID=g451.t1.utr3p1;Parent=g451.t1 #PROT g451.t1 g451 MTMQVAETRANITEIEKKIKLISEKHGQALAAISEKQGQKNNEEMDRLMEETQVLANRVRNKLKSIDKENKELSSKSGGHSKSADMRIRESQHAILSKKFVEVMTEYNEIQTNYKQKYRDRVKRQFKIVKPDATADEVEKVLEGEGGNIFAQQILSTSHAEAKQALEDIQDRHKDILKLEKSIKELHELFLDMAILVESQGEMIDRIEFSVSEAADFVEEATQELKSAQHYQSSARRKKICIVIVILAIILVIILALVILKK* # PASA_UPDATE: g450.t1, single gene model update, valid-1, status:[pasa:asmbl_4012,status:3], valid-1 NODE_2309_length_6770_cov_44.5813 . gene 3437 4789 . + . ID=g450;Name=g450.t1 NODE_2309_length_6770_cov_44.5813 . mRNA 3437 4789 . + . ID=g450.t1;Parent=g450;Name=g450.t1 NODE_2309_length_6770_cov_44.5813 . five_prime_UTR 3437 3478 . + . ID=g450.t1.utr5p1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . exon 3437 3481 . + . ID=g450.t1.exon1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . CDS 3479 3481 . + 0 ID=cds.g450.t1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . exon 3646 3684 . + . ID=g450.t1.exon2;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . CDS 3646 3684 . + 0 ID=cds.g450.t1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . exon 3783 3867 . + . ID=g450.t1.exon3;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . CDS 3783 3867 . + 0 ID=cds.g450.t1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . exon 4025 4789 . + . ID=g450.t1.exon4;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . CDS 4025 4554 . + 2 ID=cds.g450.t1;Parent=g450.t1 NODE_2309_length_6770_cov_44.5813 . three_prime_UTR 4555 4789 . + . ID=g450.t1.utr3p1;Parent=g450.t1 #PROT g450.t1 g450 MEGGAPVVPVGTFKLVLVGDGGTGKTTFVKRHKTGEFEKKYVATLGVEVHPLDFHTNHGVVRFNVWDTAGQEKFGGLRDGYYIQGNCAIIMFDVTARVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLGGDQQLEFVAMPALAPPEVQLDPATVQQYEEELRQAQDMPLPDEDDDA* # ORIGINAL: g2921.t1 original gene structure, not modified by PASA NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS gene 239 982 . + . ID=g2921;Name=g2921.t1 NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS mRNA 239 982 . + . ID=g2921.t1;Parent=g2921;Name=g2921.t1 NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS exon 239 387 . + . ID=g2921.t1.exon1;Parent=g2921.t1 NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS CDS 239 387 . + 2 ID=cds.g2921.t1;Parent=g2921.t1 NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS exon 773 982 . + . ID=g2921.t1.exon2;Parent=g2921.t1 NODE_5085_length_1034_cov_36.3754_potentialcontaminant AUGUSTUS CDS 773 982 . + 0 ID=cds.g2921.t1;Parent=g2921.t1 #PROT g2921.t1 g2921 LKPDNILLDDDLEPHIVDFGLSLKYGPSSTSQDKCGSPVYAAPEVVFGTPHEPSKADMWSLGVILFNIATRTMPFDLIENEVVLVTYECLVAAGETKGITKWVGLSCSALLVLLIRLL* # PASA_UPDATE: g447.t1, single gene model update, valid-1, status:[pasa:asmbl_5226,status:3], valid-1 NODE_2910_length_4764_cov_39.1461 . gene 198 2412 . + . ID=g447;Name=g447.t1 NODE_2910_length_4764_cov_39.1461 . mRNA 198 2412 . + . ID=g447.t1;Parent=g447;Name=g447.t1 NODE_2910_length_4764_cov_39.1461 . five_prime_UTR 198 251 . + . ID=g447.t1.utr5p1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . exon 198 330 . + . ID=g447.t1.exon1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . CDS 252 330 . + 0 ID=cds.g447.t1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . exon 518 622 . + . ID=g447.t1.exon2;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . CDS 518 622 . + 2 ID=cds.g447.t1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . exon 1034 1926 . + . ID=g447.t1.exon3;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . CDS 1034 1926 . + 2 ID=cds.g447.t1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . exon 2048 2412 . + . ID=g447.t1.exon4;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . CDS 2048 2188 . + 0 ID=cds.g447.t1;Parent=g447.t1 NODE_2910_length_4764_cov_39.1461 . three_prime_UTR 2189 2412 . + . ID=g447.t1.utr3p1;Parent=g447.t1 #PROT g447.t1 g447 MRAVAVLLLCVAYAAASTDFFKETFDSNWESRWVKSKAKGSDMGPWKYTAGQFYGDADADKGIQTGQDARFYGISAKFPEAASNKDKDLVIQFQIKHEQKIDCGGGYIKVFPSSLKQEKLDGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNHLIKKEIRCKDDEFSHVYTLVLHPNNKYEVYIDLEKVESGSLEEDWDFLPSKEILDPSAKKPSDWDDRKQIADPEDTKPADWDSTPEFIADPKASKPEDWDDESDGEWEAPMIDNPDYKGEWKARMIDNPAYKGEWIHPKIANPDYVEDSQLYLYEDNAYVGFDLWQVKSGTIFDNVLVSDSFDAAKDFAEQTWGKSKEGEKKMKNEIDEKERKEREEAERKRKEEEESKKKADDDEEDDDEDDEERPDKDEL* # ORIGINAL: g448.t1 original gene structure, not modified by PASA NODE_2910_length_4764_cov_39.1461 AUGUSTUS gene 3276 4624 . - . ID=g448;Name=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS mRNA 3276 4624 . - . ID=g448.t1;Parent=g448;Name=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS exon 4621 4624 . - . ID=g448.t1.exon1;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS CDS 4621 4624 . - 0 ID=cds.g448.t1;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS exon 4430 4531 . - . ID=g448.t1.exon2;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS CDS 4430 4531 . - 2 ID=cds.g448.t1;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS exon 4194 4263 . - . ID=g448.t1.exon3;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS CDS 4194 4263 . - 2 ID=cds.g448.t1;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS exon 3662 3811 . - . ID=g448.t1.exon4;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS CDS 3662 3811 . - 1 ID=cds.g448.t1;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS exon 3276 3498 . - . ID=g448.t1.exon5;Parent=g448.t1 NODE_2910_length_4764_cov_39.1461 AUGUSTUS CDS 3276 3498 . - 1 ID=cds.g448.t1;Parent=g448.t1 #PROT g448.t1 g448 MDGARDLRDRDASERSAVSNGSRRDIASDRSEADQGTADDDDDGFGPQPVKKMDLKLTNFGKALLPGEGEAMANFVAANQRIPRRGEIGLTSNEIESYEQAGYVMSGSRHRRMEAVRLRKENQIYSADERRALALLNFEERNKREGKILGGFKELLSSKIDEQKKKHKALEQRQQQQQQQQQ* # PASA_UPDATE: g2882.t1, single gene model update, valid-1, status:[pasa:asmbl_7419,status:12], valid-1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . gene 90 1143 . - . ID=g2882;Name=g2882.t1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . mRNA 90 1143 . - . ID=g2882.t1;Parent=g2882;Name=g2882.t1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . exon 949 1143 . - . ID=g2882.t1.exon1;Parent=g2882.t1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . CDS 949 1143 . - 0 ID=cds.g2882.t1;Parent=g2882.t1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . exon 90 669 . - . ID=g2882.t1.exon2;Parent=g2882.t1 NODE_4537_length_1485_cov_53.4745_potentialcontaminant . CDS 90 669 . - 0 ID=cds.g2882.t1;Parent=g2882.t1;3_prime_partial=true #PROT g2882.t1 g2882 MFRNDRGQLGVRAAGEIPYSYKPVVVTSIEGIVKIIQVKAGYYHTVALSDVGKVYFWGLDLVRYENFPVLVEGSLTGKFVRKISASSYTSTALTVDGQAFAFGFTYSFLWKYPMQFTGFNPYRVKVFEAGELFGAAFLDDEPIGAQFAQKAISVAEDSGIVRVDIGRLIQVKSPKDSAVNVTITLLPGVGDATPDVDFQFSPQTLLWYPGDETMKSILLRIIDDHVYEPPEKLTLLMRSNTSETGYLCELTITDDGDA # PASA_UPDATE: g8848.t1, single gene model update, valid-1, status:[pasa:asmbl_6691,status:12], valid-1 NODE_389_length_24982_cov_40.0959 . gene 23174 24827 . - . ID=g8848;Name=g8848.t1 NODE_389_length_24982_cov_40.0959 . mRNA 23174 24827 . - . ID=g8848.t1;Parent=g8848;Name=g8848.t1 NODE_389_length_24982_cov_40.0959 . exon 24792 24827 . - . ID=g8848.t1.exon1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . CDS 24792 24827 . - 0 ID=cds.g8848.t1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . exon 24569 24629 . - . ID=g8848.t1.exon2;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . CDS 24569 24629 . - 0 ID=cds.g8848.t1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . exon 24117 24200 . - . ID=g8848.t1.exon3;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . CDS 24117 24200 . - 2 ID=cds.g8848.t1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . exon 23831 23890 . - . ID=g8848.t1.exon4;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . CDS 23831 23890 . - 2 ID=cds.g8848.t1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . exon 23174 23492 . - . ID=g8848.t1.exon5;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . CDS 23194 23492 . - 2 ID=cds.g8848.t1;Parent=g8848.t1 NODE_389_length_24982_cov_40.0959 . three_prime_UTR 23174 23193 . - . ID=g8848.t1.utr3p1;Parent=g8848.t1 #PROT g8848.t1 g8848 MGMEYLHTAHPPILHLDLKSANVLVGEGFVAKVADFGLSLLTTSSKGFIKGGIRGTPLWMAPENLFSCNNYSTKSDVYSFGIFVWELLSRRLPFYHLTTLTFSTPIMAILGMIVISGVRPTPVPPDLPAAYVSLMRECWDAAPLSRPSFSQIRERVEAMRVDESWIEPTDDVFETHKVD* # ORIGINAL: g8847.t1 original gene structure, not modified by PASA NODE_389_length_24982_cov_40.0959 AUGUSTUS gene 6225 21948 . - . ID=g8847;Name=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS mRNA 6225 21948 . - . ID=g8847.t1;Parent=g8847;Name=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 21770 21948 . - . ID=g8847.t1.exon1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 21770 21948 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 21356 21427 . - . ID=g8847.t1.exon2;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 21356 21427 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 21073 21144 . - . ID=g8847.t1.exon3;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 21073 21144 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 20700 20771 . - . ID=g8847.t1.exon4;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 20700 20771 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 20447 20518 . - . ID=g8847.t1.exon5;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 20447 20518 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 19963 20025 . - . ID=g8847.t1.exon6;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 19963 20025 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 19564 19641 . - . ID=g8847.t1.exon7;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 19564 19641 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 19322 19393 . - . ID=g8847.t1.exon8;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 19322 19393 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 19046 19120 . - . ID=g8847.t1.exon9;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 19046 19120 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 18605 18676 . - . ID=g8847.t1.exon10;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 18605 18676 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 18366 18437 . - . ID=g8847.t1.exon11;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 18366 18437 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 17676 18220 . - . ID=g8847.t1.exon12;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 17676 18220 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 17241 17306 . - . ID=g8847.t1.exon13;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 17241 17306 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 16753 16851 . - . ID=g8847.t1.exon14;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 16753 16851 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 16433 16510 . - . ID=g8847.t1.exon15;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 16433 16510 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 16179 16268 . - . ID=g8847.t1.exon16;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 16179 16268 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 15703 15783 . - . ID=g8847.t1.exon17;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 15703 15783 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 15290 15367 . - . ID=g8847.t1.exon18;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 15290 15367 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 14877 14954 . - . ID=g8847.t1.exon19;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 14877 14954 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 14635 14709 . - . ID=g8847.t1.exon20;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 14635 14709 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 14208 14291 . - . ID=g8847.t1.exon21;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 14208 14291 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 13813 13905 . - . ID=g8847.t1.exon22;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 13813 13905 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 13534 13605 . - . ID=g8847.t1.exon23;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 13534 13605 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 13260 13328 . - . ID=g8847.t1.exon24;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 13260 13328 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 12930 13004 . - . ID=g8847.t1.exon25;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 12930 13004 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 12623 12697 . - . ID=g8847.t1.exon26;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 12623 12697 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 12121 12204 . - . ID=g8847.t1.exon27;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 12121 12204 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 11868 11939 . - . ID=g8847.t1.exon28;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 11868 11939 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 11530 11607 . - . ID=g8847.t1.exon29;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 11530 11607 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 11253 11330 . - . ID=g8847.t1.exon30;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 11253 11330 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 10917 11021 . - . ID=g8847.t1.exon31;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 10917 11021 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 10648 10755 . - . ID=g8847.t1.exon32;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 10648 10755 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 9728 10522 . - . ID=g8847.t1.exon33;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 9728 10522 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 9285 9523 . - . ID=g8847.t1.exon34;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 9285 9523 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 9001 9139 . - . ID=g8847.t1.exon35;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 9001 9139 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 8736 8791 . - . ID=g8847.t1.exon36;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 8736 8791 . - 2 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 8191 8310 . - . ID=g8847.t1.exon37;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 8191 8310 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 7925 7972 . - . ID=g8847.t1.exon38;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 7925 7972 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 7543 7602 . - . ID=g8847.t1.exon39;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 7543 7602 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 7155 7237 . - . ID=g8847.t1.exon40;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 7155 7237 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 6911 6989 . - . ID=g8847.t1.exon41;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 6911 6989 . - 1 ID=cds.g8847.t1;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 6225 6668 . - . ID=g8847.t1.exon42;Parent=g8847.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 6225 6668 . - 0 ID=cds.g8847.t1;Parent=g8847.t1 #PROT g8847.t1 g8847 MRILTLVALIVCGLFGAHHDGARALTITMPCGAPLAYCTCSSDGTTVLSCAFANPSSITSLSFRTQGRRLGPGLFDALTSLTYLDLASSGLTQLPAGIFDNLTSLTQLTLAMNPLTSIPEGIFHRLANLTLLNMGKNALSTVPRGTFDGMWSLDMLDLQLNYVPGPIFDGLVNLQSLSLYATDPTRAQISTAIFANVTSLSALDINGLLVTDLNPRAFATLPNLAFISIVNSFVGDTIPAGVFDGLPLLRTIDLSAVGLTHVPSNLLAGVPAVSLLTMRDNLLESLPDDIFMGMQIGFVTDLSGNPGSKGNLCYNPGSGCVVHACKECFCASGFSGPQCLADNTTPTIRYATTSNLTAALASAANGDTLYLAAGTYSAVLSSGPIVLINRTLTLMRDPAAPTSPVFRCKTVLFSSTTSCAFSVRNGSTITLRGITINACGKGGIATPSRSAIEVGFEETVTSATVGSTTKSRVTLIDCVLSDNGKVLDARNSAQIIISGSQIANNGLVCCTSASFPNPVDMMLVTGQLTIADSAITGNTGHNSLFSDSGRSSKIDIRNVTILDNAGPLGIKGYPSSKMMSLSTGSIRSCRVAGNKYFAMIVVFGTAKIADSSFSAGSREGEEGSALDYVRMSTAALISITNCVFNDSRPLSRGLIYSSDSTEIVIANVSFQGIHAIHILYLDNPMTRLEMSDCVIRDSSVRYVLNLAITSPLEISERTVGLDSVLRSVVIVNNTAENIIRAVDYLALLITRTNFVGNRAGNMITFSGTSRSTLEDCSILSNTLSGIIAMSGQTIVLFESTLIGPNAVTSAVTLEQNAIAHFTNSHITGLSSYVAVVSAAGSSSCNLVNTTFDANNAFDSEGTLVYVSGQAVLGVFRCTLQGNLNLNTCSFAESAKVYVSESLFLDNYATEGGGFRCSGGASVAVVSSSFSGNRAQSGGALGASGLSRIALEETRFIASPVCILPGNTAEQGGAVWLRKSSSLVCYRECAFIGNTALVPDSRSSLKGAGGAIRLQESAIFNATESNITGNAAQGVGGGVYVEGSATVLLVASALTDNQANGTDGGALFSAGHALIRIESTLLLRNAGAFAGGALCVWNAHPDDLHCDECTFANNSAAEGADLYVTNPRAIPVALVAAYPLISKSSRPATMRIVNVASVATSYYSGAISEVDVEIVSAFGSRSTLPDTSPAIIRISVSPTIPVNTLSGSNGTSSLRARLSGDTIAFVTGGLAKLVYGVVGNSGTYVITVSGGSDSTVGVDAVGLPITITECPQGRVPVARGTDGLESCEVASASSAAASSVSTLPVALGVSLPVVAVALVGCFLIVRWQLNAARKKNSEAVQQKFVAEHMSKIPELCELEIDRSRVQLLGELGQGEFGVVYQARVATSGGRPRVCAAKSVKTGATLEDRLAFISEAKIMHGLSHPHVISLCGVVTREEPMLALLEYAAYGNLRSFVRTVPIDSRSSHVTASMFATFAHQIACGMAYLASVSIVHRDLAARNILVGSDLYGELCCKIADFGLSRSTGEKDYYRKRKAGALPIKWCAIENLRFRVYTTKSDVWSYGVTLFEIYSFGEVPYAGIHNAEMAKYLAGGPDNRMERPPHCPNSVYRIMRSCWLDDPDQRPSFSALCDALERERDKATAMGVAKDLDDGDNCAYAQDRVPGYQEQYEQYAMDAYTRTDSQAAVSQDDGARRENTYDNTVEIVQVVADTSFCIA* # ORIGINAL: g8846.t1 original gene structure, not modified by PASA NODE_389_length_24982_cov_40.0959 AUGUSTUS gene 170 5815 . + . ID=g8846;Name=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS mRNA 170 5815 . + . ID=g8846.t1;Parent=g8846;Name=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 170 2509 . + . ID=g8846.t1.exon1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 170 2509 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 2668 2837 . + . ID=g8846.t1.exon2;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 2668 2837 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 3275 3499 . + . ID=g8846.t1.exon3;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 3275 3499 . + 0 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 3663 3729 . + . ID=g8846.t1.exon4;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 3663 3729 . + 0 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 3879 3983 . + . ID=g8846.t1.exon5;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 3879 3983 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 4237 4290 . + . ID=g8846.t1.exon6;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 4237 4290 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 4560 4615 . + . ID=g8846.t1.exon7;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 4560 4615 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 4827 4900 . + . ID=g8846.t1.exon8;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 4827 4900 . + 0 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 5210 5274 . + . ID=g8846.t1.exon9;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 5210 5274 . + 1 ID=cds.g8846.t1;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS exon 5430 5815 . + . ID=g8846.t1.exon10;Parent=g8846.t1 NODE_389_length_24982_cov_40.0959 AUGUSTUS CDS 5430 5815 . + 2 ID=cds.g8846.t1;Parent=g8846.t1 #PROT g8846.t1 g8846 DAAALSRVHIACAVLWLRAPVGGVRXXXXSFALHIDAAVGATMACADGDASAGIDVSGDASVVVVLTNITLSGCSGSALRVGGLANVTAVGALFADNEGENGGAARVSNSSHFECIGCMFTGNRATGAGGAVCASGASTVLLRDSVLAWNRALFDGGALSFADRVHATVSGTTIGNNTAKSGGALCIRELSVATLTNCNLSMNTAEAGGSVFIAGGSAVVTGGRCTSNTATYKGGCTLLSASGLASFQDMEIAKNHAGDAGGGIHAVASKSLTVARVTAYANVARNSTGGFLHAMDAGRVTVVGSTVLNCGASMLGGAFYIGGTATDFILSDSECMYNQCYFTGGAMQAERGSRTLVQRTLLHDNFAAASGGGIYASASAYVRVVDSTCQRNVANYYYAGFLAVDAAAVSLENSRITDNVGFLAGAVAALTTARINITGCVVAGSWYTPAVYLVEDAIVHATDVVFANNTTPYSGAALQVTERSFLHASGCTFTGNVAGERKGMGGAVQVTDAATAVIHDALFSSNIATRGGGAVHVNLQGRLELSRCVVTNNSVVDEDGGACGGGIMFDPTDTPNRNASLSVHDTRFAGNVAVSGGDIYTTSVHRAPLFGREIVNCTFNTSGVRVSSPPAFLSLSSAVPDTRVTSGGFLPSVSLTAVDAYGQQIVTDPYNVLVLRLLAAPSSAPNASMCITCDARVKLQGSTSKAVVHSTARFSGVRLYAEPGVYNITVTSGSPLFSGADFVASFPATVTPCGSGLYLSTEVIDGEAYPVCKEPTPTSHGGISAAVYGSVIPSVVVIASLCVGYVFWRKKRAMEKEARKYEVDFDELTLLSQIGQGVFRGSHVAIKTLCIKGVEVATVDRVAHGTDGPHSIIGSSFVFQPIYEGTDGRSAPNQSPIPSSVFKSAGANFMKEVRTMSTLRHPNIVMLLAASVQYPDLAIVVELMSRGSLYDVYRHPHVTMDWALRVAMARDAAQGLAYLHGSNPPIHHLDLKSPNLFVDEVMRVKVGDFGLAEFKRSHQMAVRRKGSILWMAPEVIRGEAYEGDRADVYSYGIVLWELLCRCLPYTTSAYRRTEIAQLISQHDVRPEIPPESPQPWVALMSRAWSRDPRARPSFPDVISALSRFDTASWTGDPSEQLRSRSSRQAGAGHNITVRELPYTPTESMCAPSEDGAEAGPSHA* # ORIGINAL: g5980.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 5536 9719 . - . ID=g5980;Name=g5980.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 5536 9719 . - . ID=g5980.t1;Parent=g5980;Name=g5980.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 9298 9719 . - . ID=g5980.t1.exon1;Parent=g5980.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 9298 9719 . - 0 ID=cds.g5980.t1;Parent=g5980.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 5536 8917 . - . ID=g5980.t1.exon2;Parent=g5980.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 5536 8917 . - 1 ID=cds.g5980.t1;Parent=g5980.t1 #PROT g5980.t1 g5980 MDAAGSASLISRTLVGGRACDIPTTNHTGSTADNADAHATDGVRSVELDSAAAASAAIVGGADATMEAQGARQASRSQHNNGVKVVKGPTAKDKSHADRLQGTNDNSIVSKRSMERQGYFDDGFLRHFVAKTSRRSPLINRGYYIRAKVVNDILLRFLDANKPNTDTANADSSSTGCAPNTSCQFISLGCGFDTGFFRLRRACPGANFRYFEIDLPDVISRKCATIQGSSELAALVGGDMRVTAVASGAAPVPSSAKKAKGGLGEGATAGDVSHSDTTSSPGESSAPTGREHGARMQSHRYSNGVADLQDCASLERVLESMGIDFAVPTLLLSECVLTYVDNRFSGALVAWAGQRFPSAAFVLYEQIHPETAFGIFMAKHFRKLGSPLRAIEALPTLQSQADRFVASGWSSAAAMDMSAFYALLGADEWKRVDALEEFDEHEEWHLKLLHYFVLVAVNDAHARGLASITADFTPIIPDAHALLAHYVDCGNEPSPVSDFARTLSQSLRWSTAALSGGDGARDQRYGRWGHSACAVGVSHDESAVSARIVVFGGFGGSGGSGGSGGSGATEVGHSRLNDAHVMDCATRRWVPLGASGSAPSPRMFHGAASVLGGSAMLVVGGRTSPSNPLADCHVLTMHPSPRWERVYVKQAASGESAGADDLLARYRHTVTSVSGGKTVVVCFGRGKGGAVRSDVAVMRSDGSSGWHVDALSASGVWPESRHSHAAVASADQSCVYVCGGLAADATRAHGDLWTLHVDAGTWRRVNALDANGRPLPQRYSHSIFVVSGADVTPSLPGDYLVVVGGVDPGHVIPWEHTAFVVDIARSSWAYLSLPQSTLIQCGTLTNKMAAVAVGETAHFFGGGGNCFSFGTFINAMVASLSYGSDANECNAPSAAVNDADGAATATQKHLRSSPLVAGDCGDDGSGNDTVKMKRDALFNAPFTVDRINASSIGNFETEHCARRAPVIVEGCSFGASVEKWTREYLAAQCGHRRVSVHVATEPALDFVRKNFRFVDMPFSELVTESLTAPTPASTPTAPQSPPPSVSRYLYFRTVGENMRRDVSDICKSFPEISADFALPDWLGVDMGERYFSSCFRVSSPGVRMWTHYDVMDNVLCQIVGTKRVSLWRPSDVDRMYMEGSVSPVTDIDGCAAALCDEWPRFALATRVDVVLRPGDMLFIPALWLHNVVALSASVSVNVFWRNLDRELYEKKDLYGSKDLPTGAQCLASASAMAASLAKLPREFRDFYARRAVEVLRSECIDGPLPPM* # ORIGINAL: g5982.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 15715 19434 . - . ID=g5982;Name=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 15715 19434 . - . ID=g5982.t1;Parent=g5982;Name=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 18973 19434 . - . ID=g5982.t1.exon1;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 18973 19434 . - 0 ID=cds.g5982.t1;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 16862 18808 . - . ID=g5982.t1.exon2;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 16862 18808 . - 0 ID=cds.g5982.t1;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 16509 16637 . - . ID=g5982.t1.exon3;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 16509 16637 . - 0 ID=cds.g5982.t1;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 16223 16267 . - . ID=g5982.t1.exon4;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 16223 16267 . - 0 ID=cds.g5982.t1;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 15715 15786 . - . ID=g5982.t1.exon5;Parent=g5982.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 15715 15786 . - 0 ID=cds.g5982.t1;Parent=g5982.t1 #PROT g5982.t1 g5982 MSLWPLQSRGFATLTRSIVRTFPYKHHSNVGVAVTSGARALTPVESAGAHLRHRHTSSSSQQRGGSRRKKDATSEQPSAALSETGRGVENESPLPLSNGARVAPPPPQSSRSCVSGADPAHAGTVGPLHLYMSQVESGKLSFDECQAVALSRLQMLHEELRAYKQPPIEVLDAENPLLSVYTRKHKQRAASSAEDAGSGEDAVTRLLGRWKKKGGENQSRGDEPAPSQEPPSSGHVSAAVSSGHVSAAVGTNEGAGAPRNASPAHATAKAPDGESSHDILAAIVSVVSDGRPNWNSDNDNTNNNNNNNLSSSSSGTSGGEPPTTTGSGGDGATMTAPDMAARRSRVFSSASLPAETGARKPGALPAAPKGVYLHGDVGSGKSLAMDLFFHCASVDGGAQRKRRVHFHAFMMDVHARMHRWRSVAPLAERDLYNNDPLLPLARQIASESVLICFDEMQLPDVATAAVVTRLLSHLLEYGVVLVCTSNRRPELLYAGGVRNNRFGSFADLLLARCTPVQLGSGVDYRRVAYESAVKAAMEGEHCPPQSSSCNSDGSANSEGHARAPSSASRSLVMGTPDSNPSVQPVVSHGSLDELRSDRRSVVLVPCDASALRRFDLLWAVETEGEESEPLEETLRVFGRNLSVPLATAKSRAVRFSFDELCGRPHGPADYLALARAYRTFFVCAIPAFKASDRDSARRLITLVDALYEHGCRLVCVAERAPDMLCSPVRQSAPGDIGLVDDNDDIMEREMLGELMGQHIPRENANVRKLFTGEDEIFAFRRAVSRMYEMQTAAYAQRRHASDQYAFELASDAVARESDQAPPAGARDHALQRRGLESLDRQSDAPKFGASHFFGIGEQGPRVGPWGRILEEWNRVKSTRKHKPQ* # ORIGINAL: g5979.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 23 2828 . - . ID=g5979;Name=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 23 2828 . - . ID=g5979.t1;Parent=g5979;Name=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 2713 2828 . - . ID=g5979.t1.exon1;Parent=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 2713 2828 . - 0 ID=cds.g5979.t1;Parent=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 2287 2447 . - . ID=g5979.t1.exon2;Parent=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 2287 2447 . - 1 ID=cds.g5979.t1;Parent=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 23 2117 . - . ID=g5979.t1.exon3;Parent=g5979.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 23 2117 . - 2 ID=cds.g5979.t1;Parent=g5979.t1 #PROT g5979.t1 g5979 MNGTHASANVNFPAIHPKRFTQTIILPFGRRLKDFDEWSPLYTEVITPYGIIYKEKKHRRTEPSRSPTRLASRVLERGTARPEHRPAHRFARDIKSAPAGVRGAGRSDDADETSDEEEDFVGDGPASPQRVNRAKTAKHRADHSPPLPPHGGTRPPSVAFHHREDGGGRASASGSRVSSAAGARVPPAAMVAAVQNVTVGKVTDGSVDVRWEPPHGSMRDDAYRVYYAPLVPGSGVDGPVDMHSHGAPTTACSLTVDGLAAGSEYVFAVSIVRRGREGPKTRCAVPVRLAPPRDIRPKGVVVGDVGSTWVTVEWEGPHLGAATAGWDDVRGYVIKAFANVQPEDLKSKAKGGRPASANAAPVATVEIASGSATSARVEGLKEGQRYFFRVACQTGAGLGAWSERSVAAWTVDVPGRPSPPSAVDVADAQAVEVSWPVPHDGRAAIEGYAVQVAPAGSSAWEECIDDSGDGNAATTVPVALLPAAAQKGKGVVFRVRARNAVGWGEWSDAGPAHLVVVPHTPEKPAADTKKKKGKTGKKGKKGASSSASSASSASSSASSSRKSSAKSEWTADVLPQQHEQTDQQAVQSHHDVPSEQIGETAASDAAEDAAGDDSGAHEKQQEDAAYGDDFEPQEDAAGGSADQQQEDAAYGDELEQQEDAAGGSADKQQEGVAYGDDFEPQEDAAGGSADQQRAHEDAMETDASAAQETSAVEDDGGMQETQQAEASYGDDFEDADADAGQQEEQEQQEEQEQQGDHKGDAVHPPAVTVSSTSFDSATLTWTPIAGQEGR # ORIGINAL: g5983.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 19896 22611 . + . ID=g5983;Name=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 19896 22611 . + . ID=g5983.t1;Parent=g5983;Name=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 19896 20012 . + . ID=g5983.t1.exon1;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 19896 20012 . + 0 ID=cds.g5983.t1;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 20145 20346 . + . ID=g5983.t1.exon2;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 20145 20346 . + 0 ID=cds.g5983.t1;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 20580 21011 . + . ID=g5983.t1.exon3;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 20580 21011 . + 2 ID=cds.g5983.t1;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 21329 21873 . + . ID=g5983.t1.exon4;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 21329 21873 . + 2 ID=cds.g5983.t1;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 22054 22611 . + . ID=g5983.t1.exon5;Parent=g5983.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 22054 22611 . + 0 ID=cds.g5983.t1;Parent=g5983.t1 #PROT g5983.t1 g5983 MMPCIRLPRVQHRRMAAFVLTFVGFMLAMAARRSFTAVKTTLINDVGITKKQLGNLESAYLSVYAASLFFLGHVGDECDRRWVVALGLFGSGVCSILFGFHFGTNHNLYGWLMLVWVFNGVFQSLIWPSSVAIISDWFPAKAVGDNIKTSAVDDGDTKINSDIDGDKYRREEAPQVSTRYRSFVFGVWTANMSIGAILGVVITNNTLVYGWQWSLYVPGFMLCAWALLLLLLLDPSPPMSAAGGHITENNVCDAVRAKYDREAAEPGGLSPSWDSSDATTPLLPKANGSDHAFDKGARTQAAAHAGRYAPAPNRFCFYSNQMASRFCALFARKFKIHAVAIRIRGVAAFALCFLLLKFTMEVIINWLPVYLKDHLHWGVVKSNYLSSPWSIGCLVGGIAVGLTADFLRPRRMHYFALAVLLTIATGMIYVYQVAGAGSDVVNGVIMSIIGLTLCGPSKLVMAAVPADLGAHMTRLDLSAYDPLGRPVNASASTARDGTNSSLNGGDVPPHPAANCKDSKSHASHRILSLTSTIAGIIDAFGSAGAAVEGVVTTRLEDAHGWSSVFYLLVLTSALSALVVWAYAGVDFARHKRDESLLHRQFSQADTEPLLLSVQENE* # ORIGINAL: g5985.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 24256 26058 . - . ID=g5985;Name=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 24256 26058 . - . ID=g5985.t1;Parent=g5985;Name=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 25811 26058 . - . ID=g5985.t1.exon1;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 25811 26058 . - 0 ID=cds.g5985.t1;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 25144 25588 . - . ID=g5985.t1.exon2;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 25144 25588 . - 1 ID=cds.g5985.t1;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 24684 24761 . - . ID=g5985.t1.exon3;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 24684 24761 . - 0 ID=cds.g5985.t1;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 24256 24444 . - . ID=g5985.t1.exon4;Parent=g5985.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 24256 24444 . - 0 ID=cds.g5985.t1;Parent=g5985.t1 #PROT g5985.t1 g5985 MTRSVPLQQRVALRDNVDDDAFVYQRHVESKLGHVNSNFSDDGTVSFFWRPHTLSVLFLVAAVLVYVALFQTTPDDSATNKMRGLGAGAFIFVIIGLLNFRDGPFTRPHPAFWRLVLCITVLYEIVLVFVLFQTAADARQLLTYIDSSLGVPPPERSYAEDCRLFDNDWSLAPAVWDKLDAFVLAHVLGWWGKAIIIRDPMLCHVMSIAFELLEYSLEFQLPNFAECWWDHWILDALVCNWLGIYLGMKTCQYLEMRVYHWRGLWSIRSYKKKVVRAAAQFTPYNWTTFHWGATTSLKRFLAVLAITSAISALCAVLNL* # ORIGINAL: g5981.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 12504 15165 . + . ID=g5981;Name=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 12504 15165 . + . ID=g5981.t1;Parent=g5981;Name=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 12504 12587 . + . ID=g5981.t1.exon1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 12504 12587 . + 0 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 12972 13147 . + . ID=g5981.t1.exon2;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 12972 13147 . + 0 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 13271 13566 . + . ID=g5981.t1.exon3;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 13271 13566 . + 1 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 13913 14145 . + . ID=g5981.t1.exon4;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 13913 14145 . + 2 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 14339 14401 . + . ID=g5981.t1.exon5;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 14339 14401 . + 0 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 14561 14647 . + . ID=g5981.t1.exon6;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 14561 14647 . + 0 ID=cds.g5981.t1;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 14866 15165 . + . ID=g5981.t1.exon7;Parent=g5981.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 14866 15165 . + 0 ID=cds.g5981.t1;Parent=g5981.t1 #PROT g5981.t1 g5981 MISLPSIAIGVLAAVIFMHAANDTESYAELDPFPNLAGRIVTHDGVALHCKTWGVSDGVVPRAILLIAHGGGEHVGRYDALAQSLAQAVSTTSSTSSQITTPYVRWKSKSAPLSLISPVIYFCIVIYFCNFILCVTCSDGYTVFGCDFRGHGYSQGHRFHVDIFEEYVEDLRAAYMHATTLGRQKVFIVGHSMGALVALKLSLLNQAVSRVTHAHRSATPQVHGPLELHHPLPHYGGIVLAAPCLSVQGIVDSLLGYVARGIRAVSPRLQLRPIDYTLASSDASIVRSLSSDPLVYHRGMRVGVVAELLRATSEVNAELDRLSSPVLVLHGRRDAFCSAEGSLTLFSKSQTRSKQLRTYEHSLSAVSDGMYASSDGSSSPAPTKLFAGHALLTERHSMRRVIEDITLWISGL* # ORIGINAL: g5984.t1 original gene structure, not modified by PASA NODE_351_length_26302_cov_40.3234 AUGUSTUS gene 23329 23958 . - . ID=g5984;Name=g5984.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS mRNA 23329 23958 . - . ID=g5984.t1;Parent=g5984;Name=g5984.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 23879 23958 . - . ID=g5984.t1.exon1;Parent=g5984.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 23879 23958 . - 0 ID=cds.g5984.t1;Parent=g5984.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS exon 23329 23569 . - . ID=g5984.t1.exon2;Parent=g5984.t1 NODE_351_length_26302_cov_40.3234 AUGUSTUS CDS 23329 23569 . - 1 ID=cds.g5984.t1;Parent=g5984.t1 #PROT g5984.t1 g5984 MNIWRLFLYFFGGAVGMREVYQYMTDSNCKKFGHQAWVVSAIIFTETLICIKFGREMFDQPVPPNVVKAWIVFWGGLAIWTVWWFGLRKARESREKRLGAAEEKKD* # ORIGINAL: g5363.t1 original gene structure, not modified by PASA NODE_547_length_21446_cov_39.8027 AUGUSTUS gene 19815 21258 . - . ID=g5363;Name=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS mRNA 19815 21258 . - . ID=g5363.t1;Parent=g5363;Name=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 21153 21258 . - . ID=g5363.t1.exon1;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 21153 21258 . - 0 ID=cds.g5363.t1;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 21000 21058 . - . ID=g5363.t1.exon2;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 21000 21058 . - 2 ID=cds.g5363.t1;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 20680 20794 . - . ID=g5363.t1.exon3;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 20680 20794 . - 0 ID=cds.g5363.t1;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 20172 20305 . - . ID=g5363.t1.exon4;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 20172 20305 . - 2 ID=cds.g5363.t1;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 19815 19946 . - . ID=g5363.t1.exon5;Parent=g5363.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 19815 19946 . - 0 ID=cds.g5363.t1;Parent=g5363.t1 #PROT g5363.t1 g5363 MLREFRRREIDLEAMLSAKDKEIDELRKSGGTAPRKYETPRFSWESYNRECLRSEHFREAINAPPNGAFDESTRALYRAVMEEIVSRGEVRADSCGLGSQSQSTAPLSQGGATAKGYESTASESHLSGQSSTEPSPVKTLSQESVEDSAARRRLELEARLAKSRAAPPAKDSREAKRRKLL* # PASA_UPDATE: g5361.t1, single gene model update, valid-1, status:[pasa:asmbl_8103,status:12], valid-1 NODE_547_length_21446_cov_39.8027 . gene 12084 15427 . + . ID=g5361;Name=g5361.t1 NODE_547_length_21446_cov_39.8027 . mRNA 12084 15427 . + . ID=g5361.t1;Parent=g5361;Name=g5361.t1 NODE_547_length_21446_cov_39.8027 . five_prime_UTR 12084 12177 . + . ID=g5361.t1.utr5p1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . five_prime_UTR 12428 12460 . + . ID=g5361.t1.utr5p2;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 12084 12177 . + . ID=g5361.t1.exon1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 12428 12565 . + . ID=g5361.t1.exon2;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 12461 12565 . + 0 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 12796 13022 . + . ID=g5361.t1.exon3;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 12796 13022 . + 0 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 13255 13385 . + . ID=g5361.t1.exon4;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 13255 13385 . + 1 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 13580 13653 . + . ID=g5361.t1.exon5;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 13580 13653 . + 2 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 13816 13872 . + . ID=g5361.t1.exon6;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 13816 13872 . + 0 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 14112 14211 . + . ID=g5361.t1.exon7;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 14112 14211 . + 0 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 14418 14494 . + . ID=g5361.t1.exon8;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 14418 14494 . + 2 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 14716 14843 . + . ID=g5361.t1.exon9;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . CDS 14716 14829 . + 0 ID=cds.g5361.t1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . exon 15034 15427 . + . ID=g5361.t1.exon10;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . three_prime_UTR 14830 14843 . + . ID=g5361.t1.utr3p1;Parent=g5361.t1 NODE_547_length_21446_cov_39.8027 . three_prime_UTR 15034 15427 . + . ID=g5361.t1.utr3p2;Parent=g5361.t1 #PROT g5361.t1 g5361 MARFALIAVVMTAALVGHAFAWGPDGHTLVGDIAQTLLTQTAVARVKATLTASEGTTLGAVANWADEIKSEHEDAWSYPLHYVDTPDGACGYVHSRDCVDVTTGTQLPNFCVAGAIANYSSIIAKDHAKAYNELDDEALKFLSHFFGDIHQPLHVGFTSDRGGNNIKVYFFEKSSNLHSIWDTSIIEKRVTDDFSGSLDSFREYLINRINTDWKSEVSAWSTCADGSAVCPDAWAVESVALACQYAYKNVTDGDHLADDYYKSSITVIEEQLAKGAVRLAAAVNSFYPASTYGL* # ORIGINAL: g5360.t1 original gene structure, not modified by PASA NODE_547_length_21446_cov_39.8027 AUGUSTUS gene 2587 10954 . + . ID=g5360;Name=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS mRNA 2587 10954 . + . ID=g5360.t1;Parent=g5360;Name=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 2587 2673 . + . ID=g5360.t1.exon1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 2587 2673 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 2838 3080 . + . ID=g5360.t1.exon2;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 2838 3080 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 3246 3335 . + . ID=g5360.t1.exon3;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 3246 3335 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 3523 3639 . + . ID=g5360.t1.exon4;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 3523 3639 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 3971 4135 . + . ID=g5360.t1.exon5;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 3971 4135 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 4515 4692 . + . ID=g5360.t1.exon6;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 4515 4692 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 4846 4992 . + . ID=g5360.t1.exon7;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 4846 4992 . + 2 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 5170 5460 . + . ID=g5360.t1.exon8;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 5170 5460 . + 2 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 5757 5812 . + . ID=g5360.t1.exon9;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 5757 5812 . + 2 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 6008 6109 . + . ID=g5360.t1.exon10;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 6008 6109 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 6541 6656 . + . ID=g5360.t1.exon11;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 6541 6656 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 6805 7405 . + . ID=g5360.t1.exon12;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 6805 7405 . + 1 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 7719 8147 . + . ID=g5360.t1.exon13;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 7719 8147 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 8405 8893 . + . ID=g5360.t1.exon14;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 8405 8893 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 9337 9429 . + . ID=g5360.t1.exon15;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 9337 9429 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 9669 9791 . + . ID=g5360.t1.exon16;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 9669 9791 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 10114 10215 . + . ID=g5360.t1.exon17;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 10114 10215 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 10452 10589 . + . ID=g5360.t1.exon18;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 10452 10589 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS exon 10859 10954 . + . ID=g5360.t1.exon19;Parent=g5360.t1 NODE_547_length_21446_cov_39.8027 AUGUSTUS CDS 10859 10954 . + 0 ID=cds.g5360.t1;Parent=g5360.t1 #PROT g5360.t1 g5360 MAKAQTNGKRKRPTEAEDAEETVAKPAKKQAALPAKDVAATLSTTEKNKLIETFADMGDDDGADDGADDESDEEAEEDESDDSDFVDGENDESDDAMDTSGGKQPALEVKDDLYRPPTSEEISTLKETADLFKSNLFRMQTTELLAEISVGAKARDAITVHLNVLKEIIEKMKDLKEVEVTTKSVKGVTVPLVGPGAIKASFKKPAAMTVVGSFAAGFAAKPNVNVDVAVEMPLDYFQPKDHLNYRYFHKRAYYLAVVAAAIKKDGRLGPSVQYADWAGDSRRPIIVIDLSALDGKKKGNAVIRIFPTISTSTFALNKLAPNRNNVRRHKLGGGKTDDGLEAASEQQQPATPRYNNAILMDAYMTEHARLLKECADTIPAFGDAAILLRVWLRRRLFASTADGVTGFVASMLLAHLVGIRKINRHMSSYQIVRLALELIANTDFIAGLSMTKNTTEETPALDVFSSSFDASLVDTSGRVNLLASVSKAAAEELRMEARASVAVLSDVKGDGFDALFMQQIDFNERYDNYVNIPALPPIDTVGSTRFADPIIDWCDWSRLVSAFVVALLRKGLGDRAIAVRPRPITTTANASKYASGSIQSLRDASSPQPAHTATSGAEVGSLSVGLLLHPENSLRFVDFGPSPQDEDASRDFRAFWGAKAELRRFQDGRILESAVWQCDRHERARIPERICLHLLARHIRLPATNVKVVSSHSLVAQVLVKEGSAVDTGVQDSFAVMAAFESLSKALRGADLPLTITAVAPASPALRGTDPFPPSPITQFTDASQLQSSNDGHQKWLDGTVYGPLDGSVKAIRVWISLESSLRWPDSLEAVRRVRTAFQLRLIALLGASKGGHFGPFAATDDYVEVAHKGFVFKISIAHEGEVTLLRARDPSLGDRLHRNAFLRPSLASKLAAFSLRTMAYGETARLAKRWLRSHLLSGHFTDEAVELLVAHCFAHPHPHATPGTALSGFARFLALLSRYEFATRPLVVDVDGELKDASAVEAKFRDTERSRLPALYIVTPESPTESRWTELGPSQPVLNRAVVLARESLRVLKDLLNSATDGDVDFTHIFRTPLEDYDVVFRLHANRIPNYPENVDARLDALAGDSKKSRKGYKNLELSANGAKALPLIDFNPVNKYVYELRKQYAHIAMFFHDIHGGDVVGVVFLPHAKTSHKLKVSAAQDTAPVKGVDGAVTDNIDEIIASMQHIGDGLVASVERKH* # PASA_UPDATE: g5359.t1, single gene model update, valid-1, status:[pasa:asmbl_8101,status:12], valid-1 NODE_547_length_21446_cov_39.8027 . gene 617 2151 . - . ID=g5359;Name=g5359.t1 NODE_547_length_21446_cov_39.8027 . mRNA 617 2151 . - . ID=g5359.t1;Parent=g5359;Name=g5359.t1 NODE_547_length_21446_cov_39.8027 . five_prime_UTR 2108 2151 . - . ID=g5359.t1.utr5p1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . exon 2054 2151 . - . ID=g5359.t1.exon1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . CDS 2054 2107 . - 0 ID=cds.g5359.t1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . exon 1837 1886 . - . ID=g5359.t1.exon2;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . CDS 1837 1886 . - 0 ID=cds.g5359.t1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . exon 1278 1454 . - . ID=g5359.t1.exon3;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . CDS 1278 1454 . - 1 ID=cds.g5359.t1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . exon 617 902 . - . ID=g5359.t1.exon4;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . CDS 824 902 . - 1 ID=cds.g5359.t1;Parent=g5359.t1 NODE_547_length_21446_cov_39.8027 . three_prime_UTR 617 823 . - . ID=g5359.t1.utr3p1;Parent=g5359.t1 #PROT g5359.t1 g5359 MANAVKNLWAKVRPYVITHPDVPRYVRYQNDLAPRSIPVPNLPLGKAHKLSANYYYPRDSRRAVVPNVVALNPAEQSPLITPAATAAAVPEAAAKPAELLPPIPGRALNWRFLPNENKV* # PASA_UPDATE: g5362.t1, single gene model update, valid-1, status:[pasa:asmbl_8102,status:3], valid-1 NODE_547_length_21446_cov_39.8027 . gene 15629 18154 . - . ID=g5362;Name=g5362.t1 NODE_547_length_21446_cov_39.8027 . mRNA 15629 18154 . - . ID=g5362.t1;Parent=g5362;Name=g5362.t1 NODE_547_length_21446_cov_39.8027 . five_prime_UTR 17943 18154 . - . ID=g5362.t1.utr5p1;Parent=g5362.t1 NODE_547_length_21446_cov_39.8027 . exon 16338 18154 . - . ID=g5362.t1.exon1;Parent=g5362.t1 NODE_547_length_21446_cov_39.8027 . CDS 16338 17942 . - 0 ID=cds.g5362.t1;Parent=g5362.t1 NODE_547_length_21446_cov_39.8027 . exon 15629 16165 . - . ID=g5362.t1.exon2;Parent=g5362.t1 NODE_547_length_21446_cov_39.8027 . CDS 15995 16165 . - 0 ID=cds.g5362.t1;Parent=g5362.t1 NODE_547_length_21446_cov_39.8027 . three_prime_UTR 15629 15994 . - . ID=g5362.t1.utr3p1;Parent=g5362.t1 #PROT g5362.t1 g5362 MSRMPVEKDAKHIRVFVNGDGNFAGRKMVLNDRIVRTFDAFLDQVTDTCRPAFGAVRNVYTPVGGTPVTNMDAFQNGKDYVVGGKERFRKIDYEQIHEPPKAGHNTEHKKTEAFEASFVKRRKTVVRSARAVKEAKLAGHPIIITVFRNGDTLFHGVKLILTKRNLADFDHVLTVITERIKLQSGFARRLYTVDGRQVHDPSDITNDGQYVACGFFDKFKRLPYSTGGVEGSPKGSPKSKQKKLLMIEYSPMKGQASDAGAESDSSPPRKPIKVKHTKKKTEEEDLSLGEPVIKKQARQAREEAAAVAAAEEGQRKRAALEAAEKKKKEEAEKRDREYEERERKIKEKKEKERKEKERAAELARQAAAKKKEKDDAERRRKAEEEEEEKLVAIVPDAPAVADEKGLSRRTEKPVDVADAEEISDEEDIEELDDGGNEFNVPVSMDNDDGDLAFDSGDDGAVAAVVAKSKPVSPEASTSVRGKAPSEAAASVVKSRSSLAGSVRSIKSTKNSVHAAPAASSVRSSRASLKAAEHNEPAADASEDIADEGDGEEGGEEGGDEAAQPDPEEEEGDEGDEGDDEAYGDGLPDESS* # PASA_UPDATE: g2848.t1, single gene model update, valid-1, status:[pasa:asmbl_7818,status:12], valid-1 NODE_5037_length_1062_cov_168.345_potentialcontaminant . gene 2 1062 . + . ID=g2848;Name=g2848.t1 NODE_5037_length_1062_cov_168.345_potentialcontaminant . mRNA 2 1062 . + . ID=g2848.t1;Parent=g2848;Name=g2848.t1 NODE_5037_length_1062_cov_168.345_potentialcontaminant . five_prime_UTR 2 2 . + . ID=g2848.t1.utr5p1;Parent=g2848.t1 NODE_5037_length_1062_cov_168.345_potentialcontaminant . exon 2 1062 . + . ID=g2848.t1.exon1;Parent=g2848.t1 NODE_5037_length_1062_cov_168.345_potentialcontaminant . CDS 3 1062 . + 0 ID=cds.g2848.t1;Parent=g2848.t1;5_prime_partial=true;3_prime_partial=true #PROT g2848.t1 g2848 SEQLGTKGSGGVALYIRKGIRWTAAPVVPGEDNENILWVRVKLDGEHDLFVCSYYAPHDNSVEANAQLDTLDQHIAALSGRGNIVLLGDFNCRVGIAQPHVGPWGPQEAASTSGTKLIEILRRHQLFVANGRDPRDQITRRGRTQANSQSMIDFVILDGALWTANPRCATRLGPDVGSDHLPVCCKVHVPAPPVKSQPPPQRTKLRVERLSPKHPSVSETLDKLKTELTERFTEWDPLASSVEEAWTAFHEGLMGAASESVGFKVLRKRNHSWWDAAQMALVKERRRLYRAALEDGSGKAWAAYHLKRREVKLRVKSLINEEWETLCAEIDETRVSNPKRHWSLLRRLLPKSE # ORIGINAL: g5336.t1 original gene structure, not modified by PASA NODE_1157_length_13474_cov_44.4386 AUGUSTUS gene 435 5918 . - . ID=g5336;Name=g5336.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS mRNA 435 5918 . - . ID=g5336.t1;Parent=g5336;Name=g5336.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 435 5918 . - . ID=g5336.t1.exon1;Parent=g5336.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 435 5918 . - 0 ID=cds.g5336.t1;Parent=g5336.t1 #PROT g5336.t1 g5336 MSAPERGNTEFASVQECALSTDDSRGNNDADIHLHACADEPLVRPSELVIVAAKADNGAPASTCHILTPPLTGGSSPASGNSAVVEVPAADFVAVDSVTAVAESSVPDVAIPHEKKRPARPRSSGAPRRSVLPPVERKFKSPRLVGRAAADEGSKETKVDEVDGASAAAGTSDKSEGHVESHLSDAQRALAVQLLTLHRDIARRDEYMLFSGTNESDDEFVAYPRGHAGVARGGSSAPSQAALGVETAAVAMTHESSDSGAAHVSRDVDMVDASAQLMSVGACATAAVEAHTVGDATVDAQTATPTNTSEEPLNLSTICQRIERGHYATVGEYGADIERMCAAVIATRPAASLRAKKAVSLRVVWGRLVAKLSKRLNGSTTKPSSKFSLNEEEHERTAGDVNEGEDASNSCEDKTVHTERTWTIEETQPLLYGRVVLAKVPCEDGVEGHRWIPGVLTYDPITGAFVKTPTDGVCGGDATATRKEASRKKKRTAKGDTKVAEIAGVAVNAAATEYHVQLLSPVITAGESLLSRLWLPASSLLRYGADANPLIPAKADPQSCAADDTDVAMKNDVSDAAAPAAQAMEGVCPRRSEAGTNMPVDASRGADAVSSQSVTVMDCTQTEFVDAHKDSANAVTAQVPGELRTDSANAVATQVPGESYTNSANEVTAQIPGELSATTALPDPPSSHREECGEANVSGAIPSVDASADLTSKHVEEADPYGHLAPDTASSLRLADRLCKMNVHRRLQAFVACVQLGAFESTLASTVGGVLSAALDAIDEAMGVSTDSRKRRNSRRPSNKRRRSEKKVIKGYDECRPQMVARVAWHAAEAALSKHDPSALGKFSCHILPPWIADPDQDSGDEEEKKRAARAKRPRNNEKYYAYVVETVTNDDENTDDGEEGAEDGNGRRRRSAALKARSKFSRSAAATATAVDAADNATEVVSCEEGRRASPRAQSKTHQRIPGADARRRSAGVFAPKREVSRAGARSGNKRARKSAGDSEVTPDASERDEEIPDRKRRRTTSRNASVDETSCSPMEVEKDVAPASAIDKSDGIRRSPRKQSPRQAIPVKGSGRKAKATADGKAVDSTDEQPTKKDAKAKRKTNCAVGEAGDRNNAPANTCSDDDDDEAVNDRHEPLCTVCDEGGALICCEGSCLRSFHPWCVALKGIPESFSCDECQTNIHPCFMCARAGDTRPCGSNACSKRYHEQCARSHPLARVELNGRIMCPLHACATCKKPCNGARATRCARCPVAYHKGDGCIPVSVLWLEDRRSLCSRHVHADASTVTSLSKSSDKCRECGDGGDLICCDGCPMAFHSDCLGPDDTLPGEGTWYCRACVAGSRPVADDVVWAKFGSYRWWPARILPDSEVADNLRKALSRRPTDVPVQFLGSREVAWVEDKCVLPWKDRQDDVKKAMKVHEQGCSPRDGYSRALVHAVDEAKKMEERKLAAASKGRREKPPPFRMLKTNLYVCPRPQRRKGGPQCACTGAPGKQCGADCINRILFFECSPSDCPSGDACQNQRFQKRMYAEGEVFRTEGGRGWGFRATKPIAAGDFVIEYVGEVLSVRECQERLKRDSELGLKDYYFLSLTNDEVIDARHKANNARFINHCCDANCATQKWTVLGETRIGIFAVRDIPAGTELTFDYQFECIGRADLVACACGAKNCSGYLGVRPTKSDADGADKKKKKVNRKGGARRSNSSARRGRLTASGHDDECFVCGAGGQLVLCSKGGCPRSYHLECIHETSVPKSRWNCPWHHCDECGAASTEFCQSCPTSYCGSHAAGHVRDGGRCAECAEAEAADPCAGAAVTGDDNDAVTVLGTTTQADE* # ORIGINAL: g5337.t1 original gene structure, not modified by PASA NODE_1157_length_13474_cov_44.4386 AUGUSTUS gene 6731 7246 . + . ID=g5337;Name=g5337.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS mRNA 6731 7246 . + . ID=g5337.t1;Parent=g5337;Name=g5337.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 6731 7246 . + . ID=g5337.t1.exon1;Parent=g5337.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 6731 7246 . + 0 ID=cds.g5337.t1;Parent=g5337.t1 #PROT g5337.t1 g5337 MGIEYACSWLCVPAQPADRYQSDESDEDFDDETTAPRELMRINRDEFQLAANLRSNVAPDVGKAFTTGTAPLCLNIRPKAIPSDLIRPTVEWKNMDVKRVADVCTTSPFGRGTETVVDATVRKTLELKCNDFVIENTPEWSALLRQKILPEAMKALAPACLSAALQRHCTK* # ORIGINAL: g5339.t1 original gene structure, not modified by PASA NODE_1157_length_13474_cov_44.4386 AUGUSTUS gene 8958 12435 . + . ID=g5339;Name=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS mRNA 8958 12435 . + . ID=g5339.t1;Parent=g5339;Name=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 8958 9309 . + . ID=g5339.t1.exon1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 8958 9309 . + 0 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 9691 9831 . + . ID=g5339.t1.exon2;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 9691 9831 . + 2 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 10214 10502 . + . ID=g5339.t1.exon3;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 10214 10502 . + 2 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 10743 11099 . + . ID=g5339.t1.exon4;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 10743 11099 . + 1 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 11354 11544 . + . ID=g5339.t1.exon5;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 11354 11544 . + 1 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 11744 11892 . + . ID=g5339.t1.exon6;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 11744 11892 . + 2 ID=cds.g5339.t1;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 12256 12435 . + . ID=g5339.t1.exon7;Parent=g5339.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 12256 12435 . + 0 ID=cds.g5339.t1;Parent=g5339.t1 #PROT g5339.t1 g5339 MATPHADATLDSSAYIHSFQGDEVIVHSSPSTTYDDIVGKLGLKSRGKLRRAQPQVISSLGTAVPEIPHAVSVCMPAWQDNVDYEEGDPRVHEKLESGYPRFCFHPCVKKVIVIASSVRCRSFVHSTLGRPGVVRLCELGVAGIVVAISSVEFKDLVKSFWQHSGEIVTSRRAETALRALSTAVDDGDEEEGMRHIEEHYGRQLSLSRHTHARDLVVGRIASLSGEAIDHVLLCPTGMAAIFTVHRALLTRHPKRKSVMFGFPYLDTLKILQKFGPGCVFLGLGEEEDLASLERHLETAYATDIEENKIFAVFCEFPSNPLCKSPALGRLSRLSRKYGFPIVVDDTIGGFANVAVTSAADVVVTSLTKLFSGESNVMGGSIVVSSQSPLCVDLLDCIRAANEDVMFPEDLLVLERNSRDYAERAKKINKNAERLCDFLAKSEKVLSVFYPKFTTAENYRAYKKSDGGFGGLFSVVLKDEARAPTFFDALQVSKGPSLGTNFTLCCPYTILAHYTELGFAREYGISPSLIRVSVGLEDGEDLIERFAKALDAV* # ORIGINAL: g5338.t1 original gene structure, not modified by PASA NODE_1157_length_13474_cov_44.4386 AUGUSTUS gene 7327 8235 . + . ID=g5338;Name=g5338.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS mRNA 7327 8235 . + . ID=g5338.t1;Parent=g5338;Name=g5338.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 7327 7464 . + . ID=g5338.t1.exon1;Parent=g5338.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 7327 7464 . + 0 ID=cds.g5338.t1;Parent=g5338.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS exon 7552 8235 . + . ID=g5338.t1.exon2;Parent=g5338.t1 NODE_1157_length_13474_cov_44.4386 AUGUSTUS CDS 7552 8235 . + 0 ID=cds.g5338.t1;Parent=g5338.t1 #PROT g5338.t1 g5338 MLPSKCAGGQLVVRHGAETGYTAPGGKKKCTWVAFFSDVEHEVTPVAALTPAAALAEKLLTLASRTADYLAPDKSLLPATRALDDDSTYFDEDVPRYAGFLLQHAYAGDLSAIPLKTVDLALYKAIAMTGLPIRIVPVDLYLSGPCDGDDASYARKCGVNALNGSLVEIFEINKAQPQVRRLLYREVHLEDYCGRDDDMRLPVRIMEAEITEKVRAMRGADKKIEGTGNEGSALSFLYKRAVILVALVPAAQAEAALPKWEQNWGHDTSRFLP* # ORIGINAL: g13402.t1 original gene structure, not modified by PASA NODE_5410_length_866_cov_31.5866 AUGUSTUS gene 378 759 . + . ID=g13402;Name=g13402.t1 NODE_5410_length_866_cov_31.5866 AUGUSTUS mRNA 378 759 . + . ID=g13402.t1;Parent=g13402;Name=g13402.t1 NODE_5410_length_866_cov_31.5866 AUGUSTUS exon 378 512 . + . ID=g13402.t1.exon1;Parent=g13402.t1 NODE_5410_length_866_cov_31.5866 AUGUSTUS CDS 378 512 . + 2 ID=cds.g13402.t1;Parent=g13402.t1 NODE_5410_length_866_cov_31.5866 AUGUSTUS exon 656 759 . + . ID=g13402.t1.exon2;Parent=g13402.t1 NODE_5410_length_866_cov_31.5866 AUGUSTUS CDS 656 759 . + 2 ID=cds.g13402.t1;Parent=g13402.t1 #PROT g13402.t1 g13402 GHPTLAGRTVLLLEGGPRRSYAPVAHKYSNRVSALSPSSVSFLRDIGAWDDIAAENRSHPFDSMKVCRWIAPLHVSAG* # ORIGINAL: g9852.t1 original gene structure, not modified by PASA NODE_3994_length_2386_cov_36.968 AUGUSTUS gene 160 1733 . - . ID=g9852;Name=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS mRNA 160 1733 . - . ID=g9852.t1;Parent=g9852;Name=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS exon 1722 1733 . - . ID=g9852.t1.exon1;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS CDS 1722 1733 . - 0 ID=cds.g9852.t1;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS exon 1515 1613 . - . ID=g9852.t1.exon2;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS CDS 1515 1613 . - 0 ID=cds.g9852.t1;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS exon 1075 1229 . - . ID=g9852.t1.exon3;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS CDS 1075 1229 . - 0 ID=cds.g9852.t1;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS exon 554 759 . - . ID=g9852.t1.exon4;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS CDS 554 759 . - 1 ID=cds.g9852.t1;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS exon 160 366 . - . ID=g9852.t1.exon5;Parent=g9852.t1 NODE_3994_length_2386_cov_36.968 AUGUSTUS CDS 160 366 . - 2 ID=cds.g9852.t1;Parent=g9852.t1 #PROT g9852.t1 g9852 MSQKADYINTTNHNVLRFIGGKISPEMQTPKLLWLKENNPVCWDNTARFLDLPDYLTYRATGKDVRSLCSSVCKWTYMAHQSQSTPADSAPGWSASFFRSVGLSDLVDGSASKIGTEFSGPGEPIEGGLCADAARSLGLNVGTAVGASIIDAHAGGLGVLGADGGGDGSGDVIDVTERIALVCGTSTCHMAVSRNPVDIPGVGTVLLGDDSRPVVERGRPECDRQA # ORIGINAL: g3349.t1 original gene structure, not modified by PASA NODE_1378_length_11688_cov_38.8737 AUGUSTUS gene 7176 8264 . + . ID=g3349;Name=g3349.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS mRNA 7176 8264 . + . ID=g3349.t1;Parent=g3349;Name=g3349.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 7176 8264 . + . ID=g3349.t1.exon1;Parent=g3349.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 7176 8264 . + 0 ID=cds.g3349.t1;Parent=g3349.t1 #PROT g3349.t1 g3349 MAAAAKPKTAAAGVAKKSQSAAGRVLLGLLLLCGAIYGAGVLLLVNVPASQSVLIHLHWLRLPLFANLSAPEQFGLPAARCIHMTTPDGLRINGWHVLPAGDVAVRALRRVHEGGEDRDTVFDDALRSEGSRVIVYFHGNTGSRALAHRVNLYNVLASHFDSHVIAIDYRGYGDSEGWPTEDGLALDARTAYEWTVRHRGDGAASVYVWGHSLGSAVAIRLSKELSDEGTPPRALVVDAPFTRLLDGALNHPVGFYLFGWLPRAGFLIDLFMVDKFASIERVAHVHCDMLILHGTRDSILPHALGQRLHDATLDARWESLATLHRSLQLRFASFDGAAHSNIYLQPRLLTEVSAFLAGRGTD* # PASA_UPDATE: g3350.t1, single gene model update, valid-1, status:[pasa:asmbl_1397,status:3], valid-1 NODE_1378_length_11688_cov_38.8737 . gene 8462 10890 . + . ID=g3350;Name=g3350.t1 NODE_1378_length_11688_cov_38.8737 . mRNA 8462 10890 . + . ID=g3350.t1;Parent=g3350;Name=g3350.t1 NODE_1378_length_11688_cov_38.8737 . five_prime_UTR 8462 8540 . + . ID=g3350.t1.utr5p1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 8462 8642 . + . ID=g3350.t1.exon1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 8541 8642 . + 0 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 8836 9043 . + . ID=g3350.t1.exon2;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 8836 9043 . + 0 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 9399 9481 . + . ID=g3350.t1.exon3;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 9399 9481 . + 2 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 9760 9888 . + . ID=g3350.t1.exon4;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 9760 9888 . + 0 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 10183 10378 . + . ID=g3350.t1.exon5;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 10183 10378 . + 0 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . exon 10793 10890 . + . ID=g3350.t1.exon6;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . CDS 10793 10839 . + 2 ID=cds.g3350.t1;Parent=g3350.t1 NODE_1378_length_11688_cov_38.8737 . three_prime_UTR 10840 10890 . + . ID=g3350.t1.utr3p1;Parent=g3350.t1 #PROT g3350.t1 g3350 MSSRRTRSSAASGGKRHAEQDVHTVTEDGTKEKMAAKRRKTASNVSASSLQSRKSEPTHADDSQAPTELALPASTRSVPSNCIVPAGNKCWLMKSEPDLRLEKGVDISCSIKKLQSLEGMRVPWYGVRNYQARNFMRDDMRIGDLAFFYHSSCKEPGIAGIVRICKASHPDDTQFDAKNPYFDAKSTRENPRWHMVEVGFVCELERFVSLAELKAYADGPLRSMALLQRSRLSVQPVTLDVWDFVMKLSLNPQT* # ORIGINAL: g3348.t1 original gene structure, not modified by PASA NODE_1378_length_11688_cov_38.8737 AUGUSTUS gene 3572 6594 . - . ID=g3348;Name=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS mRNA 3572 6594 . - . ID=g3348.t1;Parent=g3348;Name=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 6428 6594 . - . ID=g3348.t1.exon1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 6428 6594 . - 0 ID=cds.g3348.t1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 5564 5684 . - . ID=g3348.t1.exon2;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 5564 5684 . - 1 ID=cds.g3348.t1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 5193 5278 . - . ID=g3348.t1.exon3;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 5193 5278 . - 0 ID=cds.g3348.t1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 4043 4858 . - . ID=g3348.t1.exon4;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 4043 4858 . - 1 ID=cds.g3348.t1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 3793 3895 . - . ID=g3348.t1.exon5;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 3793 3895 . - 1 ID=cds.g3348.t1;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 3572 3676 . - . ID=g3348.t1.exon6;Parent=g3348.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 3572 3676 . - 0 ID=cds.g3348.t1;Parent=g3348.t1 #PROT g3348.t1 g3348 MASSIPQEVRDDIDEVTRAADDLDADVLELEEGYRGLADLTTTREKDAQSKELYNSCLELQDDIEDTRGLFEDYLPDADDVPEYGAAFRDIRHRLMMRIAKISQQLTDLQRKLEPDDMFEENYLKAAAASFDAAAPPSAAAPPAATPIIPRVQVQPPTPQSVTAIPNPNSNPAVKKLDARGLAHSPQTVPAAAVAATPARPVSVASTASASSVIAATPFPVRPTPSAAPIATTTARPPSSAKSAGAGVGAVAPSSTSSRPPSMSAVVAASVVATPSRAHHAGSAQASTVQAASTGKPASVAPSQPSSVVSRAGAGGVSAARAVSQQRPPKGAGVSSSAHDFDESYGDDGYDGAVTDEYGATDDEDGEEIGSVDEDLDAGPSVSGALPPGTAARASAMLNLQEGAMITALYSYQPSTSAQGELGFRAGERCQVIEAFGEWIKVVDGPGRVGYVPSAYFEVSPPPVI* # ORIGINAL: g3346.t1 original gene structure, not modified by PASA NODE_1378_length_11688_cov_38.8737 AUGUSTUS gene 34 1077 . - . ID=g3346;Name=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS mRNA 34 1077 . - . ID=g3346.t1;Parent=g3346;Name=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 1010 1077 . - . ID=g3346.t1.exon1;Parent=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 1010 1077 . - 0 ID=cds.g3346.t1;Parent=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 413 579 . - . ID=g3346.t1.exon2;Parent=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 413 579 . - 1 ID=cds.g3346.t1;Parent=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 34 139 . - . ID=g3346.t1.exon3;Parent=g3346.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 34 139 . - 2 ID=cds.g3346.t1;Parent=g3346.t1 #PROT g3346.t1 g3346 MLVRTNQKTDSLRLVFELGIRYCRDSSPDETGILTCGWASFAVFNPDGTPAAAKNTVLELHGGTLAERGVRLNPDPPKQQSRRIWNIFGGPKSVHPRLSVKIGSVRSSLMHVC # ORIGINAL: g3347.t1 original gene structure, not modified by PASA NODE_1378_length_11688_cov_38.8737 AUGUSTUS gene 2009 2824 . - . ID=g3347;Name=g3347.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS mRNA 2009 2824 . - . ID=g3347.t1;Parent=g3347;Name=g3347.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 2593 2824 . - . ID=g3347.t1.exon1;Parent=g3347.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 2593 2824 . - 0 ID=cds.g3347.t1;Parent=g3347.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS exon 2009 2160 . - . ID=g3347.t1.exon2;Parent=g3347.t1 NODE_1378_length_11688_cov_38.8737 AUGUSTUS CDS 2009 2160 . - 2 ID=cds.g3347.t1;Parent=g3347.t1 #PROT g3347.t1 g3347 MMSLADDEDAAVMSHMDADRASLASPTKKTQRISFKDATRTVISQRKKTTAADVLRAFGAMPMSFRESILHSLRDSNERYRVSAWLNPRLMDTGIGYRDLQWDYTRNKVLCAPVICTGCRLHPHGLS* # PASA_UPDATE: g11537.t1, single gene model update, valid-1, status:[pasa:asmbl_3591,status:12],[pasa:asmbl_3592,status:12], valid-1 NODE_2130_length_7580_cov_35.2654 . gene 127 7432 . + . ID=g11537;Name=g11537.t1 NODE_2130_length_7580_cov_35.2654 . mRNA 127 7432 . + . ID=g11537.t1;Parent=g11537;Name=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 127 1038 . + . ID=g11537.t1.exon1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 127 1038 . + 0 ID=cds.g11537.t1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 1323 1409 . + . ID=g11537.t1.exon2;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 1323 1409 . + 0 ID=cds.g11537.t1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 1605 2457 . + . ID=g11537.t1.exon3;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 1605 2457 . + 0 ID=cds.g11537.t1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 2762 5360 . + . ID=g11537.t1.exon4;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 2762 5360 . + 2 ID=cds.g11537.t1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 5588 6966 . + . ID=g11537.t1.exon5;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 5588 6966 . + 1 ID=cds.g11537.t1;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . exon 7148 7432 . + . ID=g11537.t1.exon6;Parent=g11537.t1 NODE_2130_length_7580_cov_35.2654 . CDS 7148 7432 . + 2 ID=cds.g11537.t1;Parent=g11537.t1;3_prime_partial=true #PROT g11537.t1 g11537 MGGMSKIIGMVTTAKKADASVPIVESSSMHGGHPPGDLNAPEYIHLETLHDCLNASRAGIKDTSDMLADSGAPLEYFLFDRLQHSRPFDVVRLASLCLGVLSASDSRLGGFVGLVRRKYQLLAEGALHEIELAPTQASVRQLQFRHASDLGVDYVIAVAAMASRIERSTMIQAVLRSLTAVLERLIAGRAPPETTVEGLLQLHSSAAGTWITAEEEERCGVFWKQLEAGGKAAEFKQAYADLYAMCLKWRKKKERVFGHAVSLMRHMLCLADGKFFGERVKEFLHLIGKKSQKDIQLRAVCVRQVRRFFENLRKDLFLNDIQMLEKEVQILLQAVFAKRQSPANEDSTELVDALVAVGTVAPTLIAGTIHDMLRDKGYAVDMRSVALKSLAVLSEKFKGPAAAKVAPAVAALLDENISTAPSSGGLGSTTGATGATLQRDLLACLPQFDAGVAEKKQQHVRKIVALLLLHARDQVLTSNGYAALLRYVEQDPALNFLTAIDAVMGALVQPRSFADHDLLVTTFENMHWLSGKFLDIVNNNKAATSPSAPIVDESFLAEWSRLRPKIEGVCLVLGMHNGLWVRRAAQRMAVLAAHPMLRPGATAAAPVGAAACLMDAAGLGTDPRALEQQTDAEWAEMVQSVVGSHWRDYATAIHYAWKVLLRSWKMPHALSDGDHSASAGDAAAVDSLQLWVRNLRLLCLCVRAWDGGMPHDEVKGFFAAALEAANKSTRDVESSILASLSLVHESCYELLVTASQDVFAGQQTGGSSSSSSSDKRDKSNRLTAVATKKHVTFEEMRFHAALLGGIASGGLRSSMHVSEFYSLLFERWVRTTPAEVTSLPPAFRATVATACCRIVQLRGLIPSGDMRQLLRFVTALLGQSSSSGGATQSSQSQPASAQGGGASVAGTAAGVDEAAAAARDEQSAADVAALVLLRVALECGPVQSGDVEREIQMFLMSAALRGSHVHSEAFDACASLLCYNRQLAGSFLHHAYADFSLPQLQQLQQQQGQSSSAGGGGSGGPGGSALEAQRETLRVANFNAIVVNVWQEGLSAWSSQFSKAQLLYACLLHQCSRNLRMRQLALQLAQAMYLDPAGSVGPGWEPAMLSHPFSAVQLQRTREFSEALALRHPQLTLPLLAEAVRFHAIIGSEDKWLAIRLLVPWVRNCGRILAEAPGASRAELVQSVCEALYQLTYHSVALQSLEAHAASLWIELLSGDDEQRDGHANDGTDADWRPIVDDVMVYLCDIFAAAEQKRPTDVYSKNICRRICVYLARTGKAQRVVSLLVQRLRSVPGRFVDPSVSARDFLTMYARAVTAASEGDATGTSSSAAASGASANDEADGSGGGLYGLGAPTIAELAAYTFLADLTFEGHQELAEHAPLLLQNSLVLFGPNPFVPRVEGEAAVPDNIMLASLVQMLSHGNMSFVAPSTTAKAGGAQANKAGPMGSQVVAAIGSSASLAALPEDEEEILVRGFKTLVSQLDAYRPGLKQELAQCALQWAVFLPDADMSVESLGVFAALTDPLTYQSAYALVLASFVSLRDRDLVRVDAILEAAVEMVRRGDADNQACWLLARMAFALLLSSRLDTFALAASLLNELFSIADGAFLTADVVKDFLAEMWAPAVVEGEEWPDALAIRLLSKGLAHSSTRARTRRLIQSLAVLFSAQPDASAAPPPDAPFSLPADNALLFAMLVLYTADVIVGQPSSASEAAAFVGQLKYPQALLEGVREAFVARDHMTAAGVGAGAAVSLQDSDDFSRRLATGMRNAFGGGDSSFSLFISVTVGLLEALGEAWMMPLFKLIQVSLAWRPDFVPVSPLFVRLLRLVLSSLYSVHNDGDGVDALAEQLLVHMQHSVPEGVPPEAFETTRLYAGPHVMHAMTPLPSMRPGSAAARDHGLGAPTATATGTAVPDAGKFARALQDAPTTPDEALPILYGSVLGLDGSYDQECPAHKANGPRPEVTGISPNVAPAGASVTIRGCNLGVDGEDVVSVTVCGRPCEHVEYRNPACVRIRVPEGSGSGPIVITTRSGGEGASEVDFSYG # ORIGINAL: g7551.t1 original gene structure, not modified by PASA NODE_1174_length_13383_cov_40.9056 AUGUSTUS gene 2973 8464 . + . ID=g7551;Name=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS mRNA 2973 8464 . + . ID=g7551.t1;Parent=g7551;Name=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 2973 3036 . + . ID=g7551.t1.exon1;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 2973 3036 . + 0 ID=cds.g7551.t1;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 3215 5387 . + . ID=g7551.t1.exon2;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 3215 5387 . + 2 ID=cds.g7551.t1;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 5804 6061 . + . ID=g7551.t1.exon3;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 5804 6061 . + 1 ID=cds.g7551.t1;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 6247 8464 . + . ID=g7551.t1.exon4;Parent=g7551.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 6247 8464 . + 1 ID=cds.g7551.t1;Parent=g7551.t1 #PROT g7551.t1 g7551 MWKARSYISHTLFFALCLAGSVCLSQATADLACTPSCPSSALPATCKPINASDATDPSLDLFVSSCVYFTSGTYMYHYVNVVNGGIVWFVDDGGIIDLKVRSLLVEQGGRVVAGQWCRPFGCSGGKLNVWLWGADPTNQGETNSAYDGIQCKSPGGCYPADAASNKNCCNGGGGVASPCNGPFSCATSGQNAAFEGYAPLPMDGDGNFFGFKVLAVSYGGSLELFGRKGVRASDFVDPEGRDDGDNGARSCPTPTDFHSSEAWAQMTGNGWVRLGATAKAGDVTLVLDRAVDWTPGDEIVVTTTDWYPSHTEIAVVSVNTALGSTAVVSLVSPLKYDHFGDLTVVDAKLMEQSENPNKDVDTRAAVGLLPRSITIKSLGATPDTPFPAASACGVGASDPMCYFGGHTIVRQGFGRYHVQGVEFHQLGQGGRLGHYPAHFHLAKSTKYTNAFIKDSSSWESMTRFFAIHGTHHVGIERCVGHLSVGHGYYLEDGSEINNRLCHNLATGLRVALLTYLKMQPAGSRTYRMVPGILPSVTSLDPSYINGGDDYEPVAFWTMNMYNDIVGNMAAGVHGYGSCFWLLGSDLSGPSKKLLWTSKTGTEEDYAQWHRVPGRTSPIKRFRGNSCGTAYLALQTPIDVFPNVASEAAFGTGGARDSVPHPTHYAISLDMLPRVTGNFIPTRVSNDATYFANDGITCAKSTLYRSPPFPFSDDHERNPLLCSCAVIDRFRSSFSWAEINYTSLWLRGYWFLFSNGAVTDQLFGGLCFVTGGSWLDAPPGFWMLSHQSIFVGHTQPGGSVHAAVTGPIVDESLCRGGMCPMPTDGCGIPPAGLNPSRPLSVYDGPFFSSGSVFMRASNFSCDASLGSTECGIYRMTNQPMDMTNPSGTHMVVTNGAIGWKQPNGFYYPPAFAFRKSAFDDVTLRHTVVDITHEYLLSGPNASPQRAGDGLFNIIRPIDASTILIDEDGTLTGVVSPTSNRTSSLSSNTFFNSPPQVTECASFGLQTTPFETLTTVISMARPSTQLPSAWRVDIGWGEGSGSFPYVPIYRQLLLPEDVPCEQDICGSVTAANGMFSCTHASMMAGSQTYSAPHLTVNGMTYYVDTRAQPLEGPVCTRFASNFRPQPFAASESYVLYQVYPQRTSSVTYQMYVGAGFDTHTNGFFARIFPTAFLDGDGRQQAIIPTPASFPGHAEVDSTGVLTVTLDNSLIADDFDFINNEPWTKCLPRDVCEPNADASGCVVSRNVTDPQLRDTLQEVCNYWVTRAGGDTTSAGATLADCPRHGCLAYVFTLPASFAPKPYAEVGLPLARNFSCSSPWNTPLVQANTTCPNACPATPGGFCKLSFRDSDGDGYGDVRLSTRQFLSPKGFVDNAADCNDGDGHAHPDAPEICNGRDDNCDGSIDEGGVCLSSDISLTAFTGMPPRAATTTGASINTKSSASSLSRSALSISSSPAVGHISPNPDPMLPALSLAYSPRSSSRGPMTSALSTGDTSLASHGQGSPTPSPIGTRFAGEVVLPALVGASSGSGEDRGLSTGAVVGIVIAAFCVVVLISRERVCTRRATSASSRAVTV* # PASA_UPDATE: g7550.t1, single gene model update, valid-1, status:[pasa:asmbl_649,status:12], valid-1 NODE_1174_length_13383_cov_40.9056 . gene 77 1727 . + . ID=g7550;Name=g7550.t1 NODE_1174_length_13383_cov_40.9056 . mRNA 77 1727 . + . ID=g7550.t1;Parent=g7550;Name=g7550.t1 NODE_1174_length_13383_cov_40.9056 . five_prime_UTR 77 78 . + . ID=g7550.t1.utr5p1;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . exon 77 150 . + . ID=g7550.t1.exon1;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . CDS 79 150 . + 0 ID=cds.g7550.t1;Parent=g7550.t1;5_prime_partial=true NODE_1174_length_13383_cov_40.9056 . exon 470 681 . + . ID=g7550.t1.exon2;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . CDS 470 681 . + 0 ID=cds.g7550.t1;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . exon 1130 1224 . + . ID=g7550.t1.exon3;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . CDS 1130 1224 . + 1 ID=cds.g7550.t1;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . exon 1466 1727 . + . ID=g7550.t1.exon4;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . CDS 1466 1602 . + 2 ID=cds.g7550.t1;Parent=g7550.t1 NODE_1174_length_13383_cov_40.9056 . three_prime_UTR 1603 1727 . + . ID=g7550.t1.utr3p1;Parent=g7550.t1 #PROT g7550.t1 g7550 GKEYGIINAGYKALDAMHYEKGYKVWTYDLTPDTTPLEGGMPWALKLKTDIDFKGRRALEQQQKEGLKKRFVTLVLDDAANAAGASFAGFETIYRNGRKAGYLTLGGFGHTVQKHIGLGYVNIDPTGAEGKSINKAWLESGKYEIEVNGTRYPATLHLEAIYDPKNIKIKA* # ORIGINAL: g7552.t1 original gene structure, not modified by PASA NODE_1174_length_13383_cov_40.9056 AUGUSTUS gene 9025 13023 . - . ID=g7552;Name=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS mRNA 9025 13023 . - . ID=g7552.t1;Parent=g7552;Name=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 12900 13023 . - . ID=g7552.t1.exon1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 12900 13023 . - 0 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 12682 12759 . - . ID=g7552.t1.exon2;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 12682 12759 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 12293 12393 . - . ID=g7552.t1.exon3;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 12293 12393 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 11937 12018 . - . ID=g7552.t1.exon4;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 11937 12018 . - 0 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 11661 11777 . - . ID=g7552.t1.exon5;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 11661 11777 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 11205 11375 . - . ID=g7552.t1.exon6;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 11205 11375 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 10904 10947 . - . ID=g7552.t1.exon7;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 10904 10947 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 10561 10635 . - . ID=g7552.t1.exon8;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 10561 10635 . - 0 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 10215 10347 . - . ID=g7552.t1.exon9;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 10215 10347 . - 0 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 9865 9927 . - . ID=g7552.t1.exon10;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 9865 9927 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 9324 9515 . - . ID=g7552.t1.exon11;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 9324 9515 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS exon 9025 9110 . - . ID=g7552.t1.exon12;Parent=g7552.t1 NODE_1174_length_13383_cov_40.9056 AUGUSTUS CDS 9025 9110 . - 2 ID=cds.g7552.t1;Parent=g7552.t1 #PROT g7552.t1 g7552 MASFKIVLALVAVIAAFGVAAAMPAATTPYTYLGVFSCTSPGFLNFLPIDGKLNLFISSFTGNPLKSGSIEIIQNVGVLGKSLSNSNVTVASLGSANWPNEISKIPDEVFGKDYVLVADGFLVPGKSTGSLYALDVASVSAPTKIKLTTDNSGYFYHMGTFVDWNGDGHLDIVTARANKGVFGSGSGLIAWLENPGSEPAAGPWKEHVIENGPDVFFSLTDVDGDGRLEIIAAQFFSSKITISYASSSDYATATWTSRTIEDTIGAVFDLSLVDINGDGKLDILATNHVSDASLSGVYVYEIPADIKTGAFTRHTLASGIVTKEGGFNQASPGAAFAFHASTTTMSGKPLIALGGDGSQQAYLLTPKSTDASSWDYDLAVVIDVAGTVGQVAIADVDGDGFNELFVPNYDKSEIHAFTFRQ* # PASA_UPDATE: g332.t1, single gene model update, valid-1, status:[pasa:asmbl_8230,status:3], valid-1 NODE_569_length_21102_cov_43.7449 . gene 9828 11399 . - . ID=g332;Name=g332.t1 NODE_569_length_21102_cov_43.7449 . mRNA 9828 11399 . - . ID=g332.t1;Parent=g332;Name=g332.t1 NODE_569_length_21102_cov_43.7449 . five_prime_UTR 11319 11399 . - . ID=g332.t1.utr5p1;Parent=g332.t1 NODE_569_length_21102_cov_43.7449 . exon 10596 11399 . - . ID=g332.t1.exon1;Parent=g332.t1 NODE_569_length_21102_cov_43.7449 . CDS 10596 11318 . - 0 ID=cds.g332.t1;Parent=g332.t1 NODE_569_length_21102_cov_43.7449 . exon 9828 10369 . - . ID=g332.t1.exon2;Parent=g332.t1 NODE_569_length_21102_cov_43.7449 . CDS 10052 10369 . - 0 ID=cds.g332.t1;Parent=g332.t1 NODE_569_length_21102_cov_43.7449 . three_prime_UTR 9828 10051 . - . ID=g332.t1.utr3p1;Parent=g332.t1 #PROT g332.t1 g332 MAPPPRQPPPGRSFASTLTFSIECDFEEPSPAPCLQQIPPKTPKSPMHTRFPSGFNGAGSAVARSIVAGARHPYSVGTRTIQNYDEKKGAHGNGGACVHGGGTASTSRGHAASGRPGSSIRARQHNAADDAASDVDAPCTKCNECGGCKHVSSEGNEDELLATHVLDASGIPVLPISPGDENEDIRKYRSEKSRRALSAPQVASAVNSIRFPASPGIQSYNTYKQLPILLPPLRRRAVSRAAEHEEVSDHSDTESAHTSGRRVPSRGTDCADDDNDDAQSEASVMPAFCPYGSVFPTQVPETKGARWIQRFRFKQHRLKSQRCRTKLEEKSGNNDSHTIEDLVRSL* # ORIGINAL: g331.t1 original gene structure, not modified by PASA NODE_569_length_21102_cov_43.7449 AUGUSTUS gene 5226 9508 . + . ID=g331;Name=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS mRNA 5226 9508 . + . ID=g331.t1;Parent=g331;Name=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 5226 5258 . + . ID=g331.t1.exon1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 5226 5258 . + 0 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 5492 5733 . + . ID=g331.t1.exon2;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 5492 5733 . + 0 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 5858 7585 . + . ID=g331.t1.exon3;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 5858 7585 . + 1 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 7746 7926 . + . ID=g331.t1.exon4;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 7746 7926 . + 1 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 8272 8340 . + . ID=g331.t1.exon5;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 8272 8340 . + 0 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 8631 8831 . + . ID=g331.t1.exon6;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 8631 8831 . + 0 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 9055 9191 . + . ID=g331.t1.exon7;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 9055 9191 . + 0 ID=cds.g331.t1;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 9343 9508 . + . ID=g331.t1.exon8;Parent=g331.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 9343 9508 . + 1 ID=cds.g331.t1;Parent=g331.t1 #PROT g331.t1 g331 MSAQWAGAGVEHQGTGGSVSAPAPSAAVPGSTAAAQQSQSSGTYTSSHSAEYDPAYIYSQGYVGQTEHAGSKQPPAPDSSAASQYSNYWQQAQQAPASGGAYSQHSQYYSQQPTTPAQATPAYSGQPNYSGYGGQQQQQQQQQQQQQQQPQQGYSGYSQGGYQYPPQAQQSQYGGYGTYQGSNTQGNYPYTQAPASTPATVGSAPAQYQYGQYAEQQYATQGQSSGQPGQATQPAVGALQAAPGGAGGGDGSASSTSDSAAIAAAKAAYAIAAATNTGSASQRRTSTQGTPGYAPPAQYPPLGQQTQYYGQPQQYSQQPQQYLQQPQQYLQQPKYQAPAAPRPYQQQAPYQPHSVTPQTSGSAPPVRPPAAAPAWQYQQHKQQQQQQQQHQQQQQQQQQPSFAPPYSQHTSPAGSPVTRAGLVSPGIPSAKPVFSYAAALKGTQPAAPLQQQQQQYNQQQQQQQSRPPLQPAYIAVGPPTNRPSRFGDAPSSALGLPPSPAKPGAAQAKEDDKFPPALEDYIVRAWRDHTAAEDVREIERLLSDIIADAKMKGDIQTRNWAQFPLPRIGGGLISKGGLKSAAKKKADEKRKRKGTDDEDDADAPTDAVLQARAARFDIQPDDMPLEKPPTKKAKKGNPARKQATTFSQFNVSMADEGGDIDWETYTIRGTSTALEKQYLRLTSAPDASTVRPQHVLARSLEMVKGKWREKNDYHYVCEQLKSIRQDLTVQCIRNDFTVLVYETHARIALEKGDVGEFNQCQSQLRLLFAENIPGHVTEFIAYRILYAIYLRNDVDMMNYLAELSAKDRRDAAVKHALEVREAIAFGNYHCFFRLFADAPNMGAYLMNKYVDRERVAGLKVMIKAYRPTLPVDHVRTELAFENSRDAIKFLRLQGAVFTPDRKAVDCKETAAVFAAKTE* # PASA_UPDATE: g330.t1, single gene model update, valid-1, status:[pasa:asmbl_8229,status:12], valid-1 NODE_569_length_21102_cov_43.7449 . gene 3205 4640 . - . ID=g330;Name=g330.t1 NODE_569_length_21102_cov_43.7449 . mRNA 3205 4640 . - . ID=g330.t1;Parent=g330;Name=g330.t1 NODE_569_length_21102_cov_43.7449 . five_prime_UTR 4595 4640 . - . ID=g330.t1.utr5p1;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . five_prime_UTR 4185 4193 . - . ID=g330.t1.utr5p2;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . exon 4595 4640 . - . ID=g330.t1.exon1;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . exon 4002 4193 . - . ID=g330.t1.exon2;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . CDS 4002 4184 . - 0 ID=cds.g330.t1;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . exon 3205 3598 . - . ID=g330.t1.exon3;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . CDS 3545 3598 . - 0 ID=cds.g330.t1;Parent=g330.t1 NODE_569_length_21102_cov_43.7449 . three_prime_UTR 3205 3544 . - . ID=g330.t1.utr3p1;Parent=g330.t1 #PROT g330.t1 g330 MADQVEIKTQGFDARFPNQNQTRNCWQNYVDFHKCVKAKGEDYPPCKQFLRAYKSLCPVEWVESWDAQRAEGTYPSKI* # PASA_UPDATE: g329.t1, single gene model update, valid-1, status:[pasa:asmbl_8231,status:12], valid-1 NODE_569_length_21102_cov_43.7449 . gene 54 3055 . + . ID=g329;Name=g329.t1 NODE_569_length_21102_cov_43.7449 . mRNA 54 3055 . + . ID=g329.t1;Parent=g329;Name=g329.t1 NODE_569_length_21102_cov_43.7449 . five_prime_UTR 54 54 . + . ID=g329.t1.utr5p1;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . exon 54 222 . + . ID=g329.t1.exon1;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . CDS 55 222 . + 0 ID=cds.g329.t1;Parent=g329.t1;5_prime_partial=true NODE_569_length_21102_cov_43.7449 . exon 499 1079 . + . ID=g329.t1.exon2;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . CDS 499 1079 . + 0 ID=cds.g329.t1;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . exon 1351 3055 . + . ID=g329.t1.exon3;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . CDS 1351 3013 . + 1 ID=cds.g329.t1;Parent=g329.t1 NODE_569_length_21102_cov_43.7449 . three_prime_UTR 3014 3055 . + . ID=g329.t1.utr3p1;Parent=g329.t1 #PROT g329.t1 g329 CVCTSLQSEVLAGIKTDGDAQRKGLFLSHNNFESLCKNVAMVGARPKRFEMEKKHSASLGLSSKRGSSYSNDNQRTTSNTSVMGRTNALSPISASPSVEASSLPTSQTAATLASVASPARRRPSDTPAPTAGSSAAASLNTSSSGAALNAQSSIGHGLLPMGLPLFLSRGPAASPVRRVLSRVFGAPRVGLVEGASLGSSESLSQSSQSSSARMDSLLLHVGDAADVGVTQRTIDLVATHLSLHLPKDLRHRAHGWAKEYAACQMLQSAQLFRLITEAAREERGTEAWASSSPSQSTSSTGPSSHPESIVGSTDSDHSRASNTNIVNSIITNSMTIGGDTRRNGPAAPSPVGASHRRGSSAHQHHHQAAHPGSSQHSTPVRMQTAAISVPESRPRKLTVGSLPTHFAAYDAMSLRSTDPDSVSLSSHPELTGAWPATPRPVSLPPRPAGSWYAHGGPVAMGDNTIASEASMELARARVEFRLLELLYCALEQLSFPFPSAFQSRLTRVGFDVLPRRTFCDYLRRNVFRITEDFAMHVLETMVQAAQKRTHPAPHAAHAPSTPSTPATPHTAGSASASAFVFGRGAVLRQLSTGARPPALSPDDAEFLMHIACRLPTRNAVVRFMREWRDVIGDRYLAMQYAGQVLARHDSAVSATRQPRDRSVGFDSIDDNDSDDDDVTEAVSVSAAAEAALTAAEGQVLPAPEYAEGLGAIMDGSIMSSLTRDGHVSLSNRRFVKFIPLALLLRHSKSAASEYAECEPKRYADALGLASTASVGGTDMDNAVILLADNYIHTDIPESIALFQ* # ORIGINAL: g334.t1 original gene structure, not modified by PASA NODE_569_length_21102_cov_43.7449 AUGUSTUS gene 16340 20987 . + . ID=g334;Name=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS mRNA 16340 20987 . + . ID=g334.t1;Parent=g334;Name=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 16340 17782 . + . ID=g334.t1.exon1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 16340 17782 . + 0 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 18018 18850 . + . ID=g334.t1.exon2;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 18018 18850 . + 0 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 19046 19239 . + . ID=g334.t1.exon3;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 19046 19239 . + 1 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 19390 19556 . + . ID=g334.t1.exon4;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 19390 19556 . + 2 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 19827 19964 . + . ID=g334.t1.exon5;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 19827 19964 . + 0 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 20181 20344 . + . ID=g334.t1.exon6;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 20181 20344 . + 0 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 20565 20804 . + . ID=g334.t1.exon7;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 20565 20804 . + 1 ID=cds.g334.t1;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 20906 20987 . + . ID=g334.t1.exon8;Parent=g334.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 20906 20987 . + 1 ID=cds.g334.t1;Parent=g334.t1 #PROT g334.t1 g334 MRGFLTKQGGIYRSWKRRWFVLENNYILYFESESAQRPLGSIPLPTISKACESTAKHDHPNCLEIHTPERVYYAQADSHAEMLAWVDGIDSAMRTLREYTTGGSGERSSPDINTPSASISFSEDDSASFVMPSAQEQGLGESFTVVSGTDTFFEEYDQTKLEQKRKTRKGWALTLTDAARVRPRGMLRTGSEEDTLSSTSDAPALRAAVAVSSSPAAPAEETYKYGPEWAPLYKAAVIPVVHRVGGVVSPEHLTAQLREYLRSVFEVDSQSEEAAWIDAAQRRPSAGRKCRLRVLVMEARDVLAKDKSGTSDPFCTLGLASGNPSSSSGLAPKHPVKTAVCMRNLNPKWNEEFVLEIKDCAVQVLVLDMWDWDEATKVMGVLKLESHDFLGRVVIPLSSVNPGGSDRWYPLEKRTKRSNVGGEVRLRLCFEVVVTSAVAGTSSSSMLPSIADDALIAQYEALDLFFLKQAARLWRTQNPLQRPSSSAVVPGEPCHEECPPSPRNFEATLCAQALCILDQHAIQHGISCLDRAIARVKSLAAVERSNCHIAAETLLTHVRELQFELCANQMRAPSLADDAPFAHALSALVESLSERIRELRTHFPTTEVSSSSRIRAVLCALSEMYALPVWTRFNGDATVRDVVLKLLARHNSISYRNLRAMLAADDTGCSAGFLATMTSALTRELVDLAPCYERAFVDTLGISFIRECAATSLGLLSRDVSRVLGPMTSDPPADPDVFELYYDLKKLNAELTVRLPREKLAELPLQDYHKLFLRCVIKWTNLCHDKTPGWIISAIHQDTCEVVSKTAKYSSSVVDAFSNLDQANNHFCSTDTCALSVMERIQVFNFLSRLEWPDPVESLLFTTRLADIICMGVRVYANTIEQELKRKRFFDGDSAGFGVSQKLCVQLNNISTARNSLQSLSDSVLKIASNLEVSAAGDGHESNIALLFNEAFEHLKEVLEALVNIVAGKMTPDICGYLERMAGITQVGGSRELVKALSSFGHVLRKDSDAELSEDDVEQALGPLLKYLTENLETLASHLYDGIFRRLLTETWASVVGSLKDGVGAAIFVGGLYGRIEFLGFNFGHF* # ORIGINAL: g333.t1 original gene structure, not modified by PASA NODE_569_length_21102_cov_43.7449 AUGUSTUS gene 12043 15549 . - . ID=g333;Name=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS mRNA 12043 15549 . - . ID=g333.t1;Parent=g333;Name=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 15087 15549 . - . ID=g333.t1.exon1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 15087 15549 . - 0 ID=cds.g333.t1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 14938 14979 . - . ID=g333.t1.exon2;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 14938 14979 . - 2 ID=cds.g333.t1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 14699 14803 . - . ID=g333.t1.exon3;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 14699 14803 . - 2 ID=cds.g333.t1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 13614 14504 . - . ID=g333.t1.exon4;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 13614 14504 . - 2 ID=cds.g333.t1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 13428 13482 . - . ID=g333.t1.exon5;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 13428 13482 . - 2 ID=cds.g333.t1;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS exon 12043 13213 . - . ID=g333.t1.exon6;Parent=g333.t1 NODE_569_length_21102_cov_43.7449 AUGUSTUS CDS 12043 13213 . - 1 ID=cds.g333.t1;Parent=g333.t1 #PROT g333.t1 g333 MGRGPYVNGALVLEEMDEYGMEDSPNVPFDPLQPSTEGWDEALPRSAAYATSTPGGRLNLQLFLEQDDGPRGSVENGANFFVDLNASAAGAGVDIETARRRSSEFALADDKTRAKLIEMASLSAPPDITADEDEKLRKYGTFNGVFIRVAVSIFGVMMFLRMGWLVGNAGLGMSILLVTTSIYITVTTTFSITALCTNGRVMGGGPYFIVSRSVGIEFGTTIGILVTISQMVAIALNTVGFAEEVVKLYAESYFTGSRDWDTALVALGANAGITLIALGGVGWVNHINLALFICIMGGFLSFLIGACVRKPGYLDGFTGWSADSLKSNWDSHYTGGVTYMTCLGVFFPSVTGILAGVNLSGELKDPGRNISVGTLGAIAYTGVVYLLILIFNAALATPALLQNIKTQNFMVDISIFSPVVYAGIFSATLSTALGLLVGAPRVFAATLKDGLFPRLMMFAKLSKGGDPIRGYMLAILVASLVIIATGGNLNAIAPFVTCLYTLMYGIINYACFMASIGRSVGWRPSFRWYNKWHALSGVVGCVIFMFLTNYIAAIIITVFSLIVYKYTELKKVNMNLGDAHESFTYVNAMKALWTMESNMKTHVKNYRPSFFIPANYCRDSESILKMAAMFYKGRGVIVQGTVIAGGMTKANLDALTQLPRSVNITVRARAFCANVISPTVEDGIVGMMQTAGISKVRPNIAFLEFNDDWKRAPDADLDRIVETVRNALRLDMGVIVARSSRTLFQDYSPKATYAGNIDVFWLCDDGGLTMLMPYLLTRNYQWTKAPLRVFVPQPAGENAPDMKGELDKLLKGFRIDVHTTGTIASSDKQPRIIDSENNPIIVDPSPFTKYSSSIEQKTRESLVSFVTMPLPGKHTSGREFHAWLDQLSVHQQTIFVRGNHQNVLTPFL* # PASA_UPDATE: g11570.t1, single gene model update, valid-1, status:[pasa:asmbl_5019,status:12], valid-1 NODE_2793_length_5105_cov_38.7134 . gene 3420 4826 . + . ID=g11570;Name=g11570.t1 NODE_2793_length_5105_cov_38.7134 . mRNA 3420 4826 . + . ID=g11570.t1;Parent=g11570;Name=g11570.t1 NODE_2793_length_5105_cov_38.7134 . five_prime_UTR 3420 3531 . + . ID=g11570.t1.utr5p1;Parent=g11570.t1 NODE_2793_length_5105_cov_38.7134 . exon 3420 4826 . + . ID=g11570.t1.exon1;Parent=g11570.t1 NODE_2793_length_5105_cov_38.7134 . CDS 3532 4826 . + 0 ID=cds.g11570.t1;Parent=g11570.t1;3_prime_partial=true #PROT g11570.t1 g11570 MTSRDSTDDEGEVGYDSVPRTSSGILSRSSSPSSFIASASSSSISWGSDDTKRQAALENKQRDSGDDDNAGARNAPVLPGYFDRDNGNDAGEDLDSESEPGIQREPVASSSPVRVFSPELSSGISHSRSLVRTTSSFSSLATDNDEPREPASIGVASPLARSYSNSQTTSSATARRSDANASSVNYSDETFESESAADPLRSPSDSSSAVERTRSSFSSQQQTVHSDTTHTQTHDHENTHSYADDFEDAGTSTYADDFESDYTESASESSDFASSNMSALPDGWEGRHTSLSKLLDAIKLCGVGGGSRQTIESRIALDAERTAAVIAAMSTRVKSAHPGVVDASIGKVTWGSSADRAIAAAETSVRVERSAVERVLCANAICASQRAIDGLSERTEGDAGDVWAARQRPLQDERDHVRGCLRIVLGKLTDE # ORIGINAL: g11569.t1 original gene structure, not modified by PASA NODE_2793_length_5105_cov_38.7134 AUGUSTUS gene 168 3034 . - . ID=g11569;Name=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS mRNA 168 3034 . - . ID=g11569.t1;Parent=g11569;Name=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS exon 2055 3034 . - . ID=g11569.t1.exon1;Parent=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS CDS 2055 3034 . - 0 ID=cds.g11569.t1;Parent=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS exon 1708 1802 . - . ID=g11569.t1.exon2;Parent=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS CDS 1708 1802 . - 1 ID=cds.g11569.t1;Parent=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS exon 168 1258 . - . ID=g11569.t1.exon3;Parent=g11569.t1 NODE_2793_length_5105_cov_38.7134 AUGUSTUS CDS 168 1258 . - 2 ID=cds.g11569.t1;Parent=g11569.t1 #PROT g11569.t1 g11569 MGDDGYVEAFEVTEGDLEDEFNPDRKRRKFTKDDAIYGVWNESEGDSDDGGGRRGFGFGGSRKGGAKGKSGGNVSFVASGAPQKAEDDGGSDGSDGPRGGLGAGRSTVRAQNKGKKKKMGGAADEVASWEKHTKGIGLKLLKKMGYKEGKGLGRAQEGIAEPIAVKLRPQGMGLGFGDFEEITEQAKEKQREAEMKEKRKKRKEMGLPSDDENDRMDVDGGDGAAGKEGRAPANRWKKSEKGPRQVFKSAAEVLKESDARMEIIDMTGKTAKVLSGYDQIGRKEGDDDDDDEAQKSFSSTIPELRHNVNLLADLSLSDLTRLRKLERADKDSVGSLSTEIQRLEAVRTASAERINRLEVFIAILDRCEERIKPNAPNPLTTVDLCDVFAMLREKYPQEYVAYGVASLAVAMAAGPIARELANWDPLSDPRRGLDTFVRWRRVLCPPSQQQQQQQQQQQQDGNEESAAAFDSLVWELWMPHVRRSLNMSRWSPREQPELATALIESWLPVIPPWVAANVVEQLVMPSLHAAVDAWNPRVDFVPIHAWLHPWLPLLGSRLDSVHPIIRQKLGAALLEWHPSDPSAHAILAPWKGVFSDGEFDTFLSRTVLPKLQGALHELVVDPRHQVLDQFRWVLDWTDILLPDRMGSLLVNGFFPKWFSVLNGWLASGAHVNYEEVTIWYLGWKSLFPEAVVQLPAIKQQFARYVLVAAAAAAVDDDVAVV* # ORIGINAL: g6303.t1 original gene structure, not modified by PASA NODE_2346_length_6623_cov_64.5018 AUGUSTUS gene 1 1390 . - . ID=g6303;Name=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS mRNA 1 1390 . - . ID=g6303.t1;Parent=g6303;Name=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS exon 1219 1390 . - . ID=g6303.t1.exon1;Parent=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS CDS 1219 1390 . - 0 ID=cds.g6303.t1;Parent=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS exon 717 830 . - . ID=g6303.t1.exon2;Parent=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS CDS 717 830 . - 2 ID=cds.g6303.t1;Parent=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS exon 1 420 . - . ID=g6303.t1.exon3;Parent=g6303.t1 NODE_2346_length_6623_cov_64.5018 AUGUSTUS CDS 1 420 . - 2 ID=cds.g6303.t1;Parent=g6303.t1 #PROT g6303.t1 g6303 MQPKSHSASLADQLSLAVWDDYPTPTDAPSSDSRRNTHHQNASLLRGGRVFRAFLILSVVIVIEIFLHTLILPGGRVVMDSILRLNPSDDIPNANAIRQDSALNVHADSLSSPFDESLSGESLDWYDVGSEVRRNPFESDSESVVADSPSDGPPKGHVAEPGADNIVAQQEPQQQQQQQQPQPQPQQPQPPQQPQPPQQPQQPPQQSQQQPQQQPQQQPQQQPQQQPQQQPQQQP # PASA_UPDATE: g6304.t1, single gene model update, valid-1, status:[pasa:asmbl_4093,status:12], valid-1 NODE_2346_length_6623_cov_64.5018 . gene 3811 6506 . - . ID=g6304;Name=g6304.t1 NODE_2346_length_6623_cov_64.5018 . mRNA 3811 6506 . - . ID=g6304.t1;Parent=g6304;Name=g6304.t1 NODE_2346_length_6623_cov_64.5018 . five_prime_UTR 6505 6506 . - . ID=g6304.t1.utr5p1;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . exon 6438 6506 . - . ID=g6304.t1.exon1;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . CDS 6438 6504 . - 0 ID=cds.g6304.t1;Parent=g6304.t1;5_prime_partial=true NODE_2346_length_6623_cov_64.5018 . exon 5887 5958 . - . ID=g6304.t1.exon2;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . CDS 5887 5958 . - 2 ID=cds.g6304.t1;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . exon 4468 5473 . - . ID=g6304.t1.exon3;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . CDS 4494 5473 . - 2 ID=cds.g6304.t1;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . exon 3811 4095 . - . ID=g6304.t1.exon4;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . three_prime_UTR 4468 4493 . - . ID=g6304.t1.utr3p1;Parent=g6304.t1 NODE_2346_length_6623_cov_64.5018 . three_prime_UTR 3811 4095 . - . ID=g6304.t1.utr3p2;Parent=g6304.t1 #PROT g6304.t1 g6304 EKSASIAKSQGLWSQSLGSFSDVAGSSSVDSGEAVASQQENAVGEAANTSRQRYTPQEAERIAEKYSNDIMRITHVCDVGYAFRLYDNNQYDANSTVIRVCAEPNHVADVTESICACYGGLVIEGIDVQVTPFVQLELQGRRRSSNSGCFQGISASRERGHVDKGITCPLELHTNHRVCDHLGAAACLGGYMKRTSSQSPSVVYAVTTKHEIALEQNGLYNAEPMPTNDVVGVIVERSVAIDAVLIEVTEGMKVPMRRYDPPPRPSLGWPVYFNGRKTPSAAGKIIAVSVPKSEFYVQRDASLDLRETGSVFTDKGDCGCFWWYEGPERGSRVPIGMHCKGNRVDLAGAVSLATLFGSEHGWGMAWPELCGE* # ORIGINAL: g2042.t1 original gene structure, not modified by PASA NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS gene 3019 3522 . - . ID=g2042;Name=g2042.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS mRNA 3019 3522 . - . ID=g2042.t1;Parent=g2042;Name=g2042.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS exon 3019 3522 . - . ID=g2042.t1.exon1;Parent=g2042.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS CDS 3019 3522 . - 0 ID=cds.g2042.t1;Parent=g2042.t1 #PROT g2042.t1 g2042 MRTIGKLSLNSIYGRFALKTSGFEKDDYIPPSEAGKWFNLLRQHFNNEITLSSDSVLPNGNLLASYKTTEDNAEVKTNLRNVNVSVAAAITSYARCILYKGLDRVKERAIYADTDSIIFIADPTKDNLEDMISDKLGKWKPQTIGNGAVALAPKELLIQALHIRTSS* # ORIGINAL: g2043.t1 original gene structure, not modified by PASA NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS gene 3756 4211 . - . ID=g2043;Name=g2043.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS mRNA 3756 4211 . - . ID=g2043.t1;Parent=g2043;Name=g2043.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS exon 3756 4211 . - . ID=g2043.t1.exon1;Parent=g2043.t1 NODE_2490_length_6073_cov_18.8106_potentialcontaminant AUGUSTUS CDS 3756 4211 . - 0 ID=cds.g2043.t1;Parent=g2043.t1 #PROT g2043.t1 g2043 MMAAQDRAGPFPPNGSSPATRNIKVRKATSAPASTQSTPAKQQPPATPSPAFTRTRAALFRDVIASKTSAKKIPTAPPAPTNRSAIGSNVDMLKSLLSGKGKLKGPIPNARPSSASLTQSMERSPLRSQGRQSLSGVTDTPQTSGRPRTSA* # PASA_UPDATE: g11620.t1, single gene model update, valid-1, status:[pasa:asmbl_8793,status:3], valid-1 NODE_672_length_19266_cov_38.2971 . gene 203 3600 . + . ID=g11620;Name=g11620.t1 NODE_672_length_19266_cov_38.2971 . mRNA 203 3600 . + . ID=g11620.t1;Parent=g11620;Name=g11620.t1 NODE_672_length_19266_cov_38.2971 . five_prime_UTR 203 656 . + . ID=g11620.t1.utr5p1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 203 794 . + . ID=g11620.t1.exon1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 657 794 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 1021 1116 . + . ID=g11620.t1.exon2;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 1021 1116 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 1422 1457 . + . ID=g11620.t1.exon3;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 1422 1457 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 1871 1945 . + . ID=g11620.t1.exon4;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 1871 1945 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 2105 2137 . + . ID=g11620.t1.exon5;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 2105 2137 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . exon 2368 3600 . + . ID=g11620.t1.exon6;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . CDS 2368 3237 . + 0 ID=cds.g11620.t1;Parent=g11620.t1 NODE_672_length_19266_cov_38.2971 . three_prime_UTR 3238 3600 . + . ID=g11620.t1.utr3p1;Parent=g11620.t1 #PROT g11620.t1 g11620 MANSGEIELSSLRESMLSALASFDMNFECDLSTKVDLNMKIEELPKFDSASVSTVDRSNSTIDVNSDEGIKRYGSLRGPSDQTKKAKSSVSLFGTQRRNSERRSVSRLKSESLGEVTPRKDSASSTHGKSPLSLSANSDVAAPVHAAASVDNEKSADVTVASSIAEIGAKSDSAAATQPAHASPERVKVESASESAHGATATTPVKKVSTAKPPIHPETLAKHSAEKPAVTSVTAVGDVAHTKAAATAATASPAHADVVITLTSASVTTLAEGIEAAIVPATTSVDEKEVQTAGVATTGHSMEAHTSAAESTSASTQSADTVAAVHVEAVSSTPQRRESVQSQKATSTPKAPTEIPVAAAVAPADPSTTATATASTTATATATTTAGSASRRDSSETGHRKKDEPKKSGCGCTVL* # ORIGINAL: g11622.t1 original gene structure, not modified by PASA NODE_672_length_19266_cov_38.2971 AUGUSTUS gene 12035 12850 . + . ID=g11622;Name=g11622.t1 NODE_672_length_19266_cov_38.2971 AUGUSTUS mRNA 12035 12850 . + . ID=g11622.t1;Parent=g11622;Name=g11622.t1 NODE_672_length_19266_cov_38.2971 AUGUSTUS exon 12035 12850 . + . ID=g11622.t1.exon1;Parent=g11622.t1 NODE_672_length_19266_cov_38.2971 AUGUSTUS CDS 12035 12850 . + 0 ID=cds.g11622.t1;Parent=g11622.t1 #PROT g11622.t1 g11622 MDAMEAALDAAQDAMRRRTATDNTYAAVDGPNMRGAVRIRDPARCAFVSCAHSALADTQFGTAAITEQMRLVDDQLEGLGVAVDADWMHCHGTHGVDARDAVDDIRTALAALSAVEEHHVGLANAVRWCAGAVDVVAAQLGDALTRLGGAFAGGVYADNPLGIVELVTGLRGAIEARDACEGHYARMHCLSDVVMRRGCAAMHALLQQSRAQLATQATDPLMCIELQILAYKFGIKLRLKRTMPCGTAYPSLIMANLQPAQRAPYQSATFH* # PASA_UPDATE: g11621.t1, single gene model update, valid-1, status:[pasa:asmbl_8794,status:3], valid-1 NODE_672_length_19266_cov_38.2971 . gene 4801 10595 . + . ID=g11621;Name=g11621.t1 NODE_672_length_19266_cov_38.2971 . mRNA 4801 10595 . + . ID=g11621.t1;Parent=g11621;Name=g11621.t1 NODE_672_length_19266_cov_38.2971 . five_prime_UTR 4801 4993 . + . ID=g11621.t1.utr5p1;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . exon 4801 7099 . + . ID=g11621.t1.exon1;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . CDS 4994 7099 . + 0 ID=cds.g11621.t1;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . exon 7306 8684 . + . ID=g11621.t1.exon2;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . CDS 7306 8684 . + 0 ID=cds.g11621.t1;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . exon 8882 10595 . + . ID=g11621.t1.exon3;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . CDS 8882 10406 . + 1 ID=cds.g11621.t1;Parent=g11621.t1 NODE_672_length_19266_cov_38.2971 . three_prime_UTR 10407 10595 . + . ID=g11621.t1.utr3p1;Parent=g11621.t1 #PROT g11621.t1 g11621 MSSVGGGSAQLTGSIVDRHDEDNNEDADDEEPRSALEAALVHARTGLFGVLFIMAKETVQNSLFVIIEIIVDFLQVLSFTLADTFSWNSSWIGWLSTVTRISRFHWYLEISPSVTQALFFIALAAVMLVLLNAAYVGVTFSRGKRLNLLLVRTLRSTAGILVTVLFLPLIDIFASRFAVCGVGHLKLDNAACSWQGAEIVIKIVAIIAIILLTTLSLAVEATFFDENPESKGILSRPHARIDVAYLLYKALISILDSVLNLDETKPQWVFVAVLTGGSFLFSYLYTWYPAYYRFGYARLRATAMWCLAWASVALVCVQIANNEESNAGPILFYVGLPLAALAGSLAILERRRHILEKDTFHITSPYEIELKVRFMLEPLVNKRRRVTAGLDQNDADSKTEEDLADSKLIAQAGEVYRKALRTIGGSSLLLVFQSQYFYATAHNGVLGARALAKASRSAPFHLDEQFFVYRRQQMCQEYFSSNASESRDVIMYMTLMQSIQTVRRVEGKCLRAQSAFWNELLSARPDSTRLRAISSVINENIALGQKSFRTLLRMSPDSPQVCRMYANWLGSVMFDQDKKVRYLNKAAVLETGNDDAIAHEGGGGGALAMFSGVGRLDLDGMRDGSSAVLSLLCDEERLGTIESVNASAMRLFGCARHDLIGRDFTVILPEPFARAYQAAAQAYVSQGSLEIRGSKSVFFKNKFGFLFPGRLTVKDIPGHGVLPSFVAIAEPVVTSARDHFALVNDDGFVIAFTANCLALCPELRVEDVLEYDTHISALVPGYDRALAQRMSTLAGAKISLLSSNDAAGDTDIDSDRTAEATVWESQMSTGSANVRVVRILTTDENAVIAQSSASGMPYDGLYPPYQKRGHGDSLLDSLDGARLRSASHGSEIYGRISPRMSATTLGPFGMPAAHSFERTSSVRFSRHGSAKRGGMSAQEGTEEPHEMKPIVKESGSPPDAIAIVLDEIEVPNTLGDDDLKQAMPPLERCPTPMTNKMDAGIVAGSGIDVHTSRALRQEGADAFQTHGDASGSKKKKGSDVDDGRSSASGRSNTSTRRVNALRRVLIETNNSGLSPVLRTFRLIVLFSLAALMAMAIAQYVVEKHQVSDFEDSFEVLKTVGDIRFNAISAGLFARFFSIANAGLRPASQSALYRNQLQIASEGLDSGYKRMMDRVPKMSPKHRTLYQQLSLNYSISFDLAALKSTVRESTLAEALKLDIAQIRQLLNTNVTGQSMAAPIYLLPLINGLDSSQLSKAMNKSSTYTRQEVNDSIDEMGHKSLAVSVSGLAVVVVLSVFVMLPTIIYVERTSENTLRVFEKVPRDTIRKMRHRCDKKFKELQQEDNNSASDSDSDGDESGERAHGSGRRRSSVPKLEMKERKMVFTRSWKYIATIAVKISAFLVLGVIFFSLSYYEGFVTIENDLREGVIRVNYATYIRTTARSLLWSTYDTSAGLTQASVLANIYNNAKYELNEISRGLEIGSSVYGIPPQASLSGVHNALLYDDACNVLNVVDTNPSLMNECERIGTGILKDGLSQAVIWYLTRITDMYGAPSVNFTGADTVKFLNRKDVVELERFEDEFLQQAFSQSVDEYIRNISDALTKRGNSVLALLIVFIILSVLLYVVVYHRLIRSLDIEMKRTRSMMLMLPNEELGQMTWIDAYVTKLAGRRHV* # PASA_UPDATE: g11623.t1, single gene model update, valid-1, status:[pasa:asmbl_8795,status:12], valid-1 NODE_672_length_19266_cov_38.2971 . gene 13987 19180 . - . ID=g11623;Name=g11623.t1 NODE_672_length_19266_cov_38.2971 . mRNA 13987 19180 . - . ID=g11623.t1;Parent=g11623;Name=g11623.t1 NODE_672_length_19266_cov_38.2971 . five_prime_UTR 19153 19180 . - . ID=g11623.t1.utr5p1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 19042 19180 . - . ID=g11623.t1.exon1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 19042 19152 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 18493 18825 . - . ID=g11623.t1.exon2;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 18493 18825 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 18169 18318 . - . ID=g11623.t1.exon3;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 18169 18318 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 17672 17840 . - . ID=g11623.t1.exon4;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 17672 17840 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 17307 17407 . - . ID=g11623.t1.exon5;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 17307 17407 . - 2 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 16915 17043 . - . ID=g11623.t1.exon6;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 16915 17043 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 16531 16632 . - . ID=g11623.t1.exon7;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 16531 16632 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 16290 16375 . - . ID=g11623.t1.exon8;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 16290 16375 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 15749 15887 . - . ID=g11623.t1.exon9;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 15749 15887 . - 1 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 15304 15510 . - . ID=g11623.t1.exon10;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 15304 15510 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 15012 15147 . - . ID=g11623.t1.exon11;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 15012 15147 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 14760 14848 . - . ID=g11623.t1.exon12;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 14760 14848 . - 2 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . exon 13987 14356 . - . ID=g11623.t1.exon13;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . CDS 14261 14356 . - 0 ID=cds.g11623.t1;Parent=g11623.t1 NODE_672_length_19266_cov_38.2971 . three_prime_UTR 13987 14260 . - . ID=g11623.t1.utr3p1;Parent=g11623.t1 #PROT g11623.t1 g11623 MTSIPKRAVDVMSCEVVRLLKLTKTAVVPISYEVPRKSHREFHDDIFPDTLSGIAPIGASAWAAGENGVQSRIPLDPSKRPKNASVASVSSTSNAAAAAAPAHHVTAPTTGSHAHHHAPSAAAPAQDVHKQMASLSVGGASTSPAPAAEAPRSPGPTRQVKRQSKYNHIEGIPLHKKNNIDGIVGLSPALPGEANVLEANSKYVAIPLSGPGGQVCVLPLAPNPRVGNSPPVLQNGSAVLDFALDPFDDSVVVVACEDSSLRVWRIPEGGLKETISEPILRISGHRQKINVIRFHPTARNVVATAGYDFAIKLWDLSNGNELVTIDGHTDQLLGMEFSPDGKHLATVCKDKFLRIFDARSGKLLQTAPNHVGSRGSRVAWLGKTGLIATTGFDRSSERQVYIFKADNIATPVGIANVDVSPAVLVPHYDEDTGLLFLVGRGDTSIHCFEIVNEAPYAHPLPPYKTNVIQQGVAFLHKNVCDVKNVEFKRILKLSQSHIEIVGFHVPRTKKEYFQDDVLPDTRQKWVPAHDAAEWFAGSDKEQPLVSLLPAGMKKLSEAPVEAPKERKFGTFNPREDTPEEKKEKLLNAMVNTLSEKAGDTLPQDLMEGVAEDEWD* # ORIGINAL: g11624.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 2539 4950 . + . ID=g11624;Name=g11624.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 2539 4950 . + . ID=g11624.t1;Parent=g11624;Name=g11624.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 2539 4950 . + . ID=g11624.t1.exon1;Parent=g11624.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 2539 4950 . + 0 ID=cds.g11624.t1;Parent=g11624.t1 #PROT g11624.t1 g11624 MADPTHRRVQPPTPVSPTRDARALDTNRTPAADINSRIAALEFKCMSIASLKSEVDLMEAYCQMLSRKNAFLEEQIATLFRMVSQVTNSVNESKSDRQREDGNASSEQIAKLSKMMSQLSDCVEELKRESRDGPCERDAQNRTPAHVTHEDCELPREDVETATTPHGAEHPGIPLLSSHASADVRTKQGHDVEVSSSPPSQPEQQQSPGNDRADSNSPEKKRADSTSPGKDRADSNSPEMKRTVSTSPGKDRADSNSPGKDRADSNSPRKDHAYSSSVDDSAAESMDSEDDRSDAHDGSNVACDGSVANSAFGGSNSYNSDRDSDCDMQPTVRRRQTTALNSIVRIFARKGVDIRAAAEPTCDGGNGVVDAAEGRERHSADSPLTAAVGENTALHRRRMRRVPKRYVGTVGHAARDKVDGDDARDGDDGGDTSCPRDGMLMKRRREAVPHLNEMEGDEAVVKRRRTLVEQPRRLTSLLDRTSREAIGGDPVAYIRQLTSLSLKDSLQLRKECDSLPVAAFERLYPRRKNHTDPAPRVTHRVIGCDSVIARMTDAQCVKVSTGDRWSREYTVAYRDLLHWCSVVEKLIEQVEAACICAGVPRDVQTALIESDMDSVIVDASPQSQVRLTVRDLVSVVQHGMCIWLQNNIARRVCDELNARLAGAAERAGAERAHHVRAILDGDCLPAGNVDANPEHITLVHVQRRHRRYWAVLYRKGLATYVYAPFELIEKANFNDLEFVGAPIISHCKVEEELKRIRKNNDHDFFLCLAEMNRLCFGDEDDKHIPSNRPGLLQTLLASTMDTN* # ORIGINAL: g11625.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 5848 7886 . + . ID=g11625;Name=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 5848 7886 . + . ID=g11625.t1;Parent=g11625;Name=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 5848 6065 . + . ID=g11625.t1.exon1;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 5848 6065 . + 0 ID=cds.g11625.t1;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 6428 6540 . + . ID=g11625.t1.exon2;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 6428 6540 . + 1 ID=cds.g11625.t1;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 6804 6882 . + . ID=g11625.t1.exon3;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 6804 6882 . + 2 ID=cds.g11625.t1;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 7262 7409 . + . ID=g11625.t1.exon4;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 7262 7409 . + 1 ID=cds.g11625.t1;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 7761 7886 . + . ID=g11625.t1.exon5;Parent=g11625.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 7761 7886 . + 0 ID=cds.g11625.t1;Parent=g11625.t1 #PROT g11625.t1 g11625 MATHRFGHVTKVADNLWTVHTPFSFFGFDINNRMLIINVPSTRTIALINAVKPQDAFVEEIRDIERQTGSEVKYIIAPGDGHHLFLSHYVPLFPKASIFIPPGRIQTAQKDLKCTLIDQADPLPELRPDIVVHRFDGLRRPPPYDRDIPRPELFFLHAPTGTLYCCDMLMYNDFEPGWFQRKARMSVVGLKAFKIQFHVSGMGSIADVDKARASVRHVLSWDFDRFM* # ORIGINAL: g11626.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 9526 15530 . - . ID=g11626;Name=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 9526 15530 . - . ID=g11626.t1;Parent=g11626;Name=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 15376 15530 . - . ID=g11626.t1.exon1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 15376 15530 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 14749 15115 . - . ID=g11626.t1.exon2;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 14749 15115 . - 1 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 14377 14484 . - . ID=g11626.t1.exon3;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 14377 14484 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 13935 14055 . - . ID=g11626.t1.exon4;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 13935 14055 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 13490 13647 . - . ID=g11626.t1.exon5;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 13490 13647 . - 2 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 12978 13055 . - . ID=g11626.t1.exon6;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 12978 13055 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 12542 12687 . - . ID=g11626.t1.exon7;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 12542 12687 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 12336 12393 . - . ID=g11626.t1.exon8;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 12336 12393 . - 1 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 11591 12043 . - . ID=g11626.t1.exon9;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 11591 12043 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 10892 11128 . - . ID=g11626.t1.exon10;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 10892 11128 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 9526 10620 . - . ID=g11626.t1.exon11;Parent=g11626.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 9526 10620 . - 0 ID=cds.g11626.t1;Parent=g11626.t1 #PROT g11626.t1 g11626 MAGNSTTGSSEDTEHKFVVSFVLNTSVSLLCVLIFCIARTRSPRFFSPRSLGVGADVLPAPPGFVAWILPTLRVNTMWLLRHRGLDAAMYVRFQRKMAFTFGLLALLVLVTLIPINGSGEMSNLPSDNPAYVSGLNVISLANLAPGSDKLWAASVMGSLFLVIMWIALYREYGRYCQLRNEMRDAPTIEQYSIVTHNYPFKSRQLEVAEQEEDVRSFFDSMFPGAIVRAVPVPDCKQLSSLRRKENKICRDLEIANIRFEKKGTRPTLTVDPRGDKKKVDKIDHLAEELRRTVKEIDEAQALYGSPVQTGTAIVTFNSALTAAACAQAQISDNPWVCHVTEAPEPNDVFWNNLGTPLWRRLIGSVLMYTCMFFLIFFWSVPVTFIQGLANLSQLSQKDHFHWVKVFLDIPVVTAFIEGYLPALLLLFVTNLVLPFIRWVSTLQARTSHSEQEASVLVKYLAFLIVNVFLVSVVAGSIFNRLEQLIDSPISIVNTLGQSIPAQGYFFIQYVMVSAAGAWVDLIKPIDLLSYWFNIAFRCRTPTDYAKAQRRRFDYAEAYGNDLLISMISLTYSVLFPFILVFTAAYFLARWFVALYNFTYVHSKPFEGYGRMFRNSFGASCVSQCVMVISVIGVLSLKKSSAFLFMIPFALLVIPAYLITEKRFRRVATHGALYARVGQKYPAMHPPDAAAPESAFVSTPDGTVPPVPAADTRDNEKLRRRSSAAAPVSKSARVSRTAEEARMEDMLAGVDSTLLGSGLAVRYGSVPLAASPGSSEMLNIADRSSETAAESRQELTTDAGDNDASRPPTSTEVAEGSVAADDNASAPLVPSSRRSSPGFGTFDEASAPRPDADSDALSIDGMERGRASSGDGDQRADLDPTAEIPGRSPSTVSRQSMRRRSRTMSQEVVRRLSRSNSRARTEDEAAHAEEAARLAIEAASRPHLRAADLFQRMVANPSCEWREYTPPTLRPMDRDFHRHVMRHATPRHPVSV* # PASA_UPDATE: g11627.t1, single gene model update, valid-1, status:[pasa:asmbl_2088,status:12],[pasa:asmbl_2090,status:12], valid-1 NODE_159_length_34126_cov_41.1464 . gene 16035 19531 . + . ID=g11627;Name=g11627.t1 NODE_159_length_34126_cov_41.1464 . mRNA 16035 19531 . + . ID=g11627.t1;Parent=g11627;Name=g11627.t1 NODE_159_length_34126_cov_41.1464 . five_prime_UTR 16035 16132 . + . ID=g11627.t1.utr5p1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 16035 16336 . + . ID=g11627.t1.exon1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 16133 16336 . + 0 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 16475 16922 . + . ID=g11627.t1.exon2;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 16475 16922 . + 0 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 17142 17339 . + . ID=g11627.t1.exon3;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 17142 17339 . + 2 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 17612 17687 . + . ID=g11627.t1.exon4;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 17612 17687 . + 2 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 18014 18188 . + . ID=g11627.t1.exon5;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 18014 18188 . + 1 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 18484 18724 . + . ID=g11627.t1.exon6;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 18484 18724 . + 0 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . exon 19011 19531 . + . ID=g11627.t1.exon7;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . CDS 19011 19495 . + 2 ID=cds.g11627.t1;Parent=g11627.t1 NODE_159_length_34126_cov_41.1464 . three_prime_UTR 19496 19531 . + . ID=g11627.t1.utr3p1;Parent=g11627.t1 #PROT g11627.t1 g11627 MPTPYAVCHSLRCVLQGDMAVCWEDAANHLFIIDALGAIDDANAPHASKAALFDVRIPFIQSSNGKALARVDDRHVHGDIAAAGGNGTTAGCEQSIPSNQALAASTTGHAHHQEPVHHCRKRRKIARSPNSWNEGEIRAHAAHMSIAEWLCESHAIILDAWRVVCPFGEPRGRLRECDEQGDPLGKECLHPDAPSMSELIGIGCVMGLDRSPLYLNAGGANGATIEHPLRGCAFNRIVANVCAVPMILSPDECKAYACNAYIVPPHSAFAVSDIADAPPLLLRARPMGGFQYIVMDPPWENKSVSRGSKYATMDPSRLTELPIPRLMATDGIVAIWVTNRHRHRDFVTSQLLPLWGLRVIAEWYWLKVTRYGAPVVPMDSLHKHPYECVIIAARTLRHPNTRRHQTAANDATTGCAAPDAHAPVSEVDRAVFASVPSRIHSRKPHLGDLLSRMYGPGMTVAPSMPTETAVESRALAPTPIPSHTYTPTPTPTPTPTPTSHTRTVPSLPHASSSVDTTTADPPDATATALPQRNTRGMRVRKQKGVRTPSRSDADTSPTLHDHVSGLELFARSLTPGWMSWGNEALSLQHTGYFDALCPRIRGVGVASE* # ORIGINAL: g11628.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 19893 21440 . - . ID=g11628;Name=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 19893 21440 . - . ID=g11628.t1;Parent=g11628;Name=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 21417 21440 . - . ID=g11628.t1.exon1;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 21417 21440 . - 0 ID=cds.g11628.t1;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 20975 21053 . - . ID=g11628.t1.exon2;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 20975 21053 . - 0 ID=cds.g11628.t1;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 20397 20503 . - . ID=g11628.t1.exon3;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 20397 20503 . - 2 ID=cds.g11628.t1;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 19893 20123 . - . ID=g11628.t1.exon4;Parent=g11628.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 19893 20123 . - 0 ID=cds.g11628.t1;Parent=g11628.t1 #PROT g11628.t1 g11628 MVLVDNDQFLSDLTRLFNTQKSKSSGSVFITMKRHVDSTGKSKRGVKAETDGESHCLMRATNGKRKVSTVIGAKDVTRFQMSYANLLKANMDALKKKEKAKAKAKVAAKGKPSTPVGTAAASTAPASTKSAKAKKAKADQPTPMEH* # ORIGINAL: g11629.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 21876 26066 . - . ID=g11629;Name=g11629.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 21876 26066 . - . ID=g11629.t1;Parent=g11629;Name=g11629.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 21876 26066 . - . ID=g11629.t1.exon1;Parent=g11629.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 21876 26066 . - 0 ID=cds.g11629.t1;Parent=g11629.t1 #PROT g11629.t1 g11629 MVTLRIHSAVGLKDKGSDGDSVLCDVQVMGSPDTPSAVAVGGTRVNPEFNWLLELPAASVRDVVRVRLWTRPASPKGKPHFLGQVDFRMDDVAIAGNYVDGEFDLHGRSSRSHVAGRVNVGISYVLDADSLPAIPEGVEPVDLLGFLIDLVLALGDGSVAESSMSPGEIAASTLKDGHKRYAPSMQQQQQQQQQQGGKGQGGGLSGPSSASQLKGVRAIASWDADLPLVSRDILRQYARVHSLSEGLLRLSYLSAVKKQLARDHIVRLTGAAVVLSDCVRGTRDCIHGELSQSTDEMGNPTTVRIAFFAEEQPPFLPVACTASASQSSQLSASSSSLPNTANLCLDLPAMGVAWRRGGVVEAQLVATRIFELQSMIAQLVSEYSLAFTPLPNATPALASPPTNRADHVIVLNDALDAGQCDVSECLDPLDCLSFVLRLFNMAQEVVSVAFAGAPVFSLTDCIAVAKKSAIGRIVAEGESNGDEMAVVALNVGDFIAEDLARDEKHFAPVFARNGVDLLATSTRLLCELHTDMLRGLQKERPVENIAVLSQLYSRVKTIGDAYAKYSEGPHRLYPLVVAWLEPLVNAWFANIISETVRVWVCKAVSEDDLRPVSARVLHSSSAIDVVSCIFGCAEPLKKLEWPQDIADRTIPLGLSNVTADQFRTYSSWLQDQCLANAVAWGDVEARGKALARMCVALNNIAFAFEEMRSLCDLIGATSITSGSGAIMLTPAPSRVWGPKASAASVLSSLQSQLSNEQQRGSSASGGSGASNPIDPHRIVLSRSRQMAYYVRQQSAELDGGGSLSAVHGGAVAGVIIEALQTLNRTMDDIVGVLMKRIEPVILEHWRYATGLRGDRPSVEHIFNITETHPMRSGEAASATAKGFRSVIEKRFAPLKRNTPPVSPTLSPADPLSSSSGGSYLATSLGKALKVLRWIGDRPSSPQSPRMNNAAVSAAEGAILSASAAAGKPSEMLEPMLTFLGDSLTSLADHLYEDVFLHSLRDVWDVVLRTLDGILWNELAAPIGTSMTQRPDSAAATAALRKLDDISKAVAFLRRYFISNGNGIAEEEADSFRHAQVMRAIDLHGMTTRTLVRAYCDSQADALAVKLAAGQALQGACFGVVDFKMGIKEIMPGQTSGPLRLSINITRVGRLFVGSSVKGRGIFVVAELLPPSNVPIGDAADAQTQQSPQSFLLFQSLPFRRSPLIAFDDRRGSESPNMENRTAVQFDEAFPFDVDPAWVTLRGVPPMDCTEVNENSNSTLLPLLRIAVYCGRVTKDTSSAAKSPAVELVGETIVRVPAIDYVPINVVREYSVPLDPTGFGETPLLLKTITARRDVDAVAADFLRQRDALLSGAFRSEKEGALNASANGIHTVLRKRFSRSSVSATAVHQGAAARLDL* # ORIGINAL: g11630.t1 original gene structure, not modified by PASA NODE_159_length_34126_cov_41.1464 AUGUSTUS gene 27363 34126 . + . ID=g11630;Name=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS mRNA 27363 34126 . + . ID=g11630.t1;Parent=g11630;Name=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 27363 27459 . + . ID=g11630.t1.exon1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 27363 27459 . + 0 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 27694 27771 . + . ID=g11630.t1.exon2;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 27694 27771 . + 2 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 28077 28195 . + . ID=g11630.t1.exon3;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 28077 28195 . + 2 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 28425 28615 . + . ID=g11630.t1.exon4;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 28425 28615 . + 0 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 28891 29218 . + . ID=g11630.t1.exon5;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 28891 29218 . + 1 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 29423 30390 . + . ID=g11630.t1.exon6;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 29423 30390 . + 0 ID=cds.g11630.t1;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS exon 30661 34126 . + . ID=g11630.t1.exon7;Parent=g11630.t1 NODE_159_length_34126_cov_41.1464 AUGUSTUS CDS 30661 34126 . + 1 ID=cds.g11630.t1;Parent=g11630.t1 #PROT g11630.t1 g11630 MFESTVADLLAKYLGDFVEGLDAENLKISAFKGIIELKALAVRPDALAALKLPIKVVEGTVASVRVSIPWNSLGSQAVVIAVDGVVAIVRPADSAEDKLNKAYSAKRNKALSAETAWVASRAPQKSAGAIASRLGAMAANVVGNVEISVTNVHLRFESGTKGANAVAAGVRLGRLALSTTDADWHKCFRSGADTLLYKLVELSDLSVYLDCDGMSAHPGEPTEQKENSVIQPISLSARLKIANALTVAAAKGAVGLTVNVDVCAIGLQLKESQLGPIASLIDCMGASPQTNTASKRSLAVAWQYAVLKVRPKAVLSSRFSWRELKRIASLRRKYVERYVALISSAAKEPHEDDDIAALDRELTAAQIVLFRCIARKVQERGVAAAKKAAVSKDNSGGGSWWGWGKKTGNASGDEASAKEQREWDELEEALWSLGAGGVSSASFGVHVERISLAVVADGGDTPASVALLLGNALVTGSSEGLAVTALGQLGSLDVRFNDASIVGFSDVDSGSAVGVGVDKGSLAVTYEGSIKGEGTLRAAMRRVPRIAIPLSLLKTVLAMSGRIVSEVKVDADDIVDWYGWATRAVKRKTRRVPRIRFEAEIVAPQVLVSLSDTLRHQLLVDIGTLSLTLEPVHHSGGSESAFAGRAAFSGLQSHLVPSDFSWESPSACRPFLDRVTCSVDWTVSLSSRQKTANRANVTVSAIRGNADPAIISWAAKLVDEIDAAVDAFVVASSDSNAPRLSTPDARTASVAGPPAFVGDLLLYSPGWGTWDPCHLELTAASVMAYTQGDAAAPGVRRRLLRRPVYLSSLCVVPIAPSHAGGALDVFAIVDKNEWHLIRNERDAATLDTLSSFALRSSRGKSESDVWIERLSIASEIAAHAAAGDSDSLGENGFGMASDDDSKSSATDDDDADFVDAAEFLPPDATTPGQVDPGNTDGGIDGARATKFEGTVSVESVSLDISLHGGICGHRKAFASVDAGRTLVTVRDSKANSVLGVNLSSFSVRHEGVVVVEMGSASLSPSVESATGRDVGGEHSRDSPSTVSTASAVTRLPRGDANVVDVLIVLNKGADAHVTISSGLLRATLDRGLIQHSIAFGVEIGDRIRGERSARKSTISPPRMLAEDGGGPMTTAEALKSITPASRTSGSAPFVLRAVVNLGGVAIQLTDEAGQGGHSAPVLIGAAVEGLTVAVETGSRGLSGRCHVTNVRVYSSISANQTHHATPGAGVDAGGNGAATTGAINAAGGAVSSQRAPGCESGTTDAQQPAVDGTKHDAEFADICGMRKDVANRPLFTGRFSVPANGGDDGGYDLQIDAFFSGFRVVVATNVLLAVARYFSSFALPAVASQGEKGAQKFISGASNTAVPTNGASTAIVPPRVRASLLVEDTAVLIPGTNRSGDLRLTLPSLGVSNETDPSHTLRVDVTTVKVAGLEAMLTGVSGPLVSGLSLRLVAVRPLGIVSPQMSGEPLSLTVQLLGVTLGACDPEMNSLMLIAAHHKAIAEEAMLSTAAYFESGSARALDSKDSLAPATGDAICITRPPPLSVETLPQLRLSAIIDEANAVYYGRSDRSLPLFMSSLKGLAASALCGGGIGGAKLSVVLRSISLDTHDPSRKEMSVEPFVRCVGDDGDAPFMSLRCTASAARAEGVVSMGVAAVHVTPSVIAAMAAVNKALLVHVTPTSAEEHALPSASPGDVDNSLPIVLPKHMRVSVRLSSFDVAFGGDHSASASASASASASSGADTEEPPLHFITRV # PASA_UPDATE: g11717.t1, single gene model update, valid-1, status:[pasa:asmbl_2837,status:12],[pasa:asmbl_2838,status:12], valid-1 NODE_1862_length_8853_cov_37.3542 . gene 75 8769 . - . ID=g11717;Name=g11717.t1 NODE_1862_length_8853_cov_37.3542 . mRNA 75 8769 . - . ID=g11717.t1;Parent=g11717;Name=g11717.t1 NODE_1862_length_8853_cov_37.3542 . five_prime_UTR 8765 8769 . - . ID=g11717.t1.utr5p1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 8230 8769 . - . ID=g11717.t1.exon1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 8230 8764 . - 0 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 7282 7585 . - . ID=g11717.t1.exon2;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 7282 7585 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 6574 7067 . - . ID=g11717.t1.exon3;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 6574 7067 . - 1 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 5901 6341 . - . ID=g11717.t1.exon4;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 5901 6341 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 4999 5454 . - . ID=g11717.t1.exon5;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 4999 5454 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 4613 4828 . - . ID=g11717.t1.exon6;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 4613 4828 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 3903 4354 . - . ID=g11717.t1.exon7;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 3903 4354 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 3282 3557 . - . ID=g11717.t1.exon8;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 3282 3557 . - 0 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 2956 3148 . - . ID=g11717.t1.exon9;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 2956 3148 . - 0 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 2355 2532 . - . ID=g11717.t1.exon10;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 2355 2532 . - 2 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 1315 2031 . - . ID=g11717.t1.exon11;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 1315 2031 . - 1 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 856 1080 . - . ID=g11717.t1.exon12;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 856 1080 . - 1 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 621 681 . - . ID=g11717.t1.exon13;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 621 681 . - 1 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . exon 75 418 . - . ID=g11717.t1.exon14;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . CDS 173 418 . - 0 ID=cds.g11717.t1;Parent=g11717.t1 NODE_1862_length_8853_cov_37.3542 . three_prime_UTR 75 172 . - . ID=g11717.t1.utr3p1;Parent=g11717.t1 #PROT g11717.t1 g11717 MTSFTIEAWVGFVNDTTASTGIAKASPLTLFGLTFAKKDGSTGAFSVDITSVQDDFFALAASIPLDDGTFITMEGGAAIPHAAANTGRPSLWAVHVAITNQHLSSGDSEICLFVNGKTIALWSGTTLKNVSKLKPYIGSSGSNQGFIVDQYAVYNRALSTADIVSRVTCGGMALCPLQATAPGNPFWSIWASASSVASVRAQTKTPRQTAAATSTYTYKSITIAANPLLYFPFSSDQANVYDEYPKRSDSEAFKNIPQTSNESIIVDTSATAASIRLTNGFSIDPVGPFTVGVSLEMWIVVNEIPAGTPLSIASVQLDQTDAFILKATSSEVTISANVHYLDSSKLAFKNFPAVAISKGVRHHIVLTASFATGVVSLFVDGSAGSSTRVAANGRINSTMSLSIGGSDPQEADITVDEVALYDYEMANEIVAAHYQCGTGGACVLVTCGIRSHSSRPCPSFMTTSFWRGFSLSTDGRTDRIEQPRSFLLDESSGILSHIEFDAGDFSFSQRNSAAFCSSFDPNTLTANIDIVLIPSTAATSQLPVYRASVSIVGATMLMAVAVNTTCASPYPSPANSLAVASGEVTVVRLRSDLDCSFFAQFFRCPADAFCEPTIVRCPVALSGRFRGTMRRKPPTANADFAPVSLSLDATKGTGEMVLVLPLSPLASSRNITVAVALSCAGGSADNATLSFPSQYTALFNSMGTKWLFSDTKLRDITVTADYPGLCAGQAGQSSSNFFSLKLTRTLACVQENAMITATSQADIDPYITCTSIQSLDLTGFSASSISTLSAVSIIGDLIIRNTQLVSLDAFASLLSAGNVTISNNPRLSSLAGMSSLVRLTGTLSIRGAHLGLSSVDGPPRLSDVGGDLSLDGLVGPVTVSGLSSLRIMAGSVSIVATSIVDISALGIVRVNAPSSFTVSQNPSLRQFLRAQTLKNALYEAAVDFVQFASVNFTANPNACVPDEVMQTAHATGTVANNAPSNSSRCRIAAISFTPVAVGDQAGVKTLSHAIAGVLNLTDWQSGGSEAESGAIDIVAKLQELLTVAEQSAVAGTPVLIPEVVADIMSAIDLVSGPTNIGVMRASKASNGLDSIINSFGFAKAAASPCGTREDFTGSRVFIKSIKEPPSGLASNMSYTNARGETSSFVIPGGLDQYANFGRCVTGSFSVMTEDPFVPAANASGLRPYSDILTMKFQDVAVSNLQSSNAFVFTVAVRDSAKLDQPLCGFWNATALGWETSGCVMITRAGALVTCRCTHLTSFGVLFDTSIGGSSAIPSRDEKALSYLTYIGCSLSIVGCALTIITFVALPRLRTVPTILVMNLCGALVLVNLVYVAGIDKTSDEGGCKAVAIFLQFGLLSAFTWMGLIGHNVWRNVVVVKMGEGLTKLNWKHYATGWALPGAYVILCVIIDAGKKNAIQYGDENRCWISTVGGLVGAFLVPVGLIITGNIVVMVLAIRSLRRAAKQRSHSMAGAEGPDFTKDLLIYVSLLAILGCTWAFGYLGLIHYGFWYPFVILNCFQGVFIFCAYVLRARIYTAWQERISSLSSSFIGSSGEHTTSHSKGQSLSSVAYSRGGSSANLHEMSVVSMSTKRSGSTDALID* # ORIGINAL: g7165.t1 original gene structure, not modified by PASA NODE_745_length_18207_cov_40.6326 AUGUSTUS gene 7893 11130 . - . ID=g7165;Name=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS mRNA 7893 11130 . - . ID=g7165.t1;Parent=g7165;Name=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 11113 11130 . - . ID=g7165.t1.exon1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 11113 11130 . - 0 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 10639 11019 . - . ID=g7165.t1.exon2;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 10639 11019 . - 0 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 10457 10549 . - . ID=g7165.t1.exon3;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 10457 10549 . - 0 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 9671 9855 . - . ID=g7165.t1.exon4;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 9671 9855 . - 0 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 9189 9388 . - . ID=g7165.t1.exon5;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 9189 9388 . - 1 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 8717 8980 . - . ID=g7165.t1.exon6;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 8717 8980 . - 2 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 8401 8472 . - . ID=g7165.t1.exon7;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 8401 8472 . - 2 ID=cds.g7165.t1;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 7893 8173 . - . ID=g7165.t1.exon8;Parent=g7165.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 7893 8173 . - 2 ID=cds.g7165.t1;Parent=g7165.t1 #PROT g7165.t1 g7165 MGKARRRKTRTHVPDEVAAAAPKSFVMRRGLLGRSVTQLMVDTRRMMEPNTASRLRVQRRNVLKDFVSVAGPLGVSHFLIFSRTDVGAYLRIARLPRGPTLNFRVEEYTLAKDVLASQKKPKAPSAELRTAPLLVLNNFGGDDKSLKLMTTMFQNLFPSISIETVKLASIRRCVLLNYNSETKAIDLRHYKIGAQPVGMTKSVKRLLQTQIPNLNELSDISEYVIKNAQASESDVEDGEDSRVVLPQRVPGRGNESQKQSAIRLSEIGPRMSLKIIKIEAGMCDGEIIHHEFVSKTPDEVAATAKLRDEKKKLKEERRRMQERNVAAKKAAQDSHKQKCLGGMDRKRKRTGDDDGTDSGDDADGDSDDESEERGDGGDPDDVKSISSDDDAAYYRQAVGAEPEEGMFDGGRSGKDGHRPSARGSRGGRGRGRGRGRGDSRAGGSGGDRPAKRPRSDGGDGGRASAAASGGERRRGEMAVVRGAASQGRGKVFARRRK* # ORIGINAL: g7163.t1 original gene structure, not modified by PASA NODE_745_length_18207_cov_40.6326 AUGUSTUS gene 731 2337 . + . ID=g7163;Name=g7163.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS mRNA 731 2337 . + . ID=g7163.t1;Parent=g7163;Name=g7163.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 731 1439 . + . ID=g7163.t1.exon1;Parent=g7163.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 731 1439 . + 0 ID=cds.g7163.t1;Parent=g7163.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 2174 2337 . + . ID=g7163.t1.exon2;Parent=g7163.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 2174 2337 . + 2 ID=cds.g7163.t1;Parent=g7163.t1 #PROT g7163.t1 g7163 MSLSIDWTRLTAAHAKGAQDFINARLAEVERPDFIGDIVLTDLDFGNEPPSIEIVDITDPFEELFRDAQSDFGHLDADDSDTASVFSIGGSYANGSGMNTPRETPPFASTSLGHAHSPIGLRPADPFRPRTSSQMSDTHASFGPDGASFGGVSASLSGAANGAPGAGPLSQRETPDAPADERYTTAPEPGAAQVVVRLQYKGDARFNVQTSLVVNIPTPQFMSLPISLGLRRLQFEVLQNVDRIEKFIVDTLRKLMRDHIVFPNKHTVDLAEKRPVDSDEFDGDYDGAVR* # PASA_UPDATE: g7167.t1, single gene model update, valid-1, status:[pasa:asmbl_9163,status:12], valid-1 NODE_745_length_18207_cov_40.6326 . gene 14377 18061 . + . ID=g7167;Name=g7167.t1 NODE_745_length_18207_cov_40.6326 . mRNA 14377 18061 . + . ID=g7167.t1;Parent=g7167;Name=g7167.t1 NODE_745_length_18207_cov_40.6326 . five_prime_UTR 14377 14464 . + . ID=g7167.t1.utr5p1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 14377 14696 . + . ID=g7167.t1.exon1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 14465 14696 . + 0 ID=cds.g7167.t1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 15032 15600 . + . ID=g7167.t1.exon2;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 15032 15600 . + 2 ID=cds.g7167.t1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 15778 16104 . + . ID=g7167.t1.exon3;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 15778 16104 . + 0 ID=cds.g7167.t1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 16244 16776 . + . ID=g7167.t1.exon4;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 16244 16776 . + 0 ID=cds.g7167.t1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 16924 17401 . + . ID=g7167.t1.exon5;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 16924 17401 . + 1 ID=cds.g7167.t1;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . exon 17639 18061 . + . ID=g7167.t1.exon6;Parent=g7167.t1 NODE_745_length_18207_cov_40.6326 . CDS 17639 18061 . + 0 ID=cds.g7167.t1;Parent=g7167.t1 #PROT g7167.t1 g7167 MGRVRDGAGSKAGGCDKASGSSSSSGANCHFHVDIGALGEWGHSAMYIAFALAIVVFSARVLPRPVPATAAASEFSEERVLADLKTIVDLAYKYADTPVGSCSRSVGRLAFHDSALDTGRFLMDSIDTIVKGADPALLSIEVLATSASRSFRYLPHEPVTYTFDGLYNIAVRVVPRSMCVASTGGKGKGTAGGSCEAVGSGNGTESLSVLISAHYDTVCYSPGASDNGVQTAVLLELLRAFVARGSLDGPVVFLFNEAEESGLFGSQAFVGSHPFYSDVDMFINLDSGGGWGPLNVVQIGPHRTGLAALYAEHAPYPYGTVVASDIYQTGIVPSNTDFRVFSEAGLFGLDMVYIGDGFTYHTPIDDLSHYVPGSIQHAGSNVYAIVLALLRSPTVAHEQGSSMWTDFLGIAFINIPLKGVGTAVTAVVAVGSVLAGFFTARRNKTPVTTALCGVLSALVSVLASFVAGVALPAAAGFFVAKANTFAWFAHPALGYAMFGGWSVVGIVAVQMLFARCSRSTATEGNVTAAIAALHLTLYTALYALNIGSAVVFLWWSAFLVVASVATPFDATSRSSGWLFRLAWTFFPLLSSMQTAQRLLVVFGPIMGRFGIGGDTPLLDAGFGALVGVLTALCLVPVLAPMAHNSAARPASGTFTRIVALVCVALVVWASRGAFPYSEEAPRRIDLIHVHDADTNASQIVIGAPNPGTIDTVTHKMPGWIKGADCPYIGFTYKDMVGECYGGRVDPPDVPMPRVAVTSRPNTNSSLTSVTVEVTAPESAVFVLWFNGTLRTWSLTPDDVGGVTCACWCPPPAALTYLYRFEHCHVVDGAWEVVVGKGGDVSALLGALLVWCAL* # PASA_UPDATE: g7164.t1, single gene model update, valid-1, status:[pasa:asmbl_9162,status:12], valid-1 NODE_745_length_18207_cov_40.6326 . gene 3700 7575 . + . ID=g7164;Name=g7164.t1 NODE_745_length_18207_cov_40.6326 . mRNA 3700 7575 . + . ID=g7164.t1;Parent=g7164;Name=g7164.t1 NODE_745_length_18207_cov_40.6326 . five_prime_UTR 3700 3736 . + . ID=g7164.t1.utr5p1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 3700 3936 . + . ID=g7164.t1.exon1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 3737 3936 . + 0 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 4168 4277 . + . ID=g7164.t1.exon2;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 4168 4277 . + 1 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 4519 4746 . + . ID=g7164.t1.exon3;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 4519 4746 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 5204 5291 . + . ID=g7164.t1.exon4;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 5204 5291 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 5521 5561 . + . ID=g7164.t1.exon5;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 5521 5561 . + 1 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 5847 5918 . + . ID=g7164.t1.exon6;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 5847 5918 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 6336 6365 . + . ID=g7164.t1.exon7;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 6336 6365 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 6767 6826 . + . ID=g7164.t1.exon8;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 6767 6826 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 7206 7294 . + . ID=g7164.t1.exon9;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 7206 7294 . + 2 ID=cds.g7164.t1;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . exon 7507 7575 . + . ID=g7164.t1.exon10;Parent=g7164.t1 NODE_745_length_18207_cov_40.6326 . CDS 7507 7575 . + 0 ID=cds.g7164.t1;Parent=g7164.t1 #PROT g7164.t1 g7164 MAIPFHRRIETAAVLLWALFTPLSIGCFVVLCLLPPAWPFLLCYLAWMTLVDSNAPKRGGRRIGWLRRSVWWKLFRNYFPVSLIKECELDPAKGPFVFGYHPHGIISIGAWINFGSEATGFSKLFPGICLHLLTLVTNFKIPFMRDFLLGMGLCDVSRESCHYILGKGAGSALMIVVGGAAEALDARPGTFDLTLKKRKGFIKIAMQHGASLVPVFSFGENDLFTQVENPRGSRLRQWQSDLQHFLGFSAPLFGGRGVFSRNNFGFLPFRHPIVTVVGTPIPTPKTAKPTDAQIDEYHMKYTAGLTAIYEKYKNQYAPDRKSSLRIVE* # ORIGINAL: g7166.t1 original gene structure, not modified by PASA NODE_745_length_18207_cov_40.6326 AUGUSTUS gene 11732 13934 . + . ID=g7166;Name=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS mRNA 11732 13934 . + . ID=g7166.t1;Parent=g7166;Name=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 11732 11929 . + . ID=g7166.t1.exon1;Parent=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 11732 11929 . + 0 ID=cds.g7166.t1;Parent=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 12017 13023 . + . ID=g7166.t1.exon2;Parent=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 12017 13023 . + 0 ID=cds.g7166.t1;Parent=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS exon 13118 13934 . + . ID=g7166.t1.exon3;Parent=g7166.t1 NODE_745_length_18207_cov_40.6326 AUGUSTUS CDS 13118 13934 . + 1 ID=cds.g7166.t1;Parent=g7166.t1 #PROT g7166.t1 g7166 MAATERLHMLRGVSLPIGMPCGRPSDPPDTHGTPSLLDSFVDDGKSMLMSLSRLPPEREEGNREYKVCTDFHVDIESYRIVLNGAPIAFILSTIAQLKLVQPSPERLEHLVTQMKWRLAEGNGEALYEIGVADCGRLEGLNDDDLAASLDTLSVMAARNGATIRSVRRKSVECGCAAEVAVSRLPFANSPTETRVAVLGSVDAGKSTLLGVLAHGDLDNGRGRARLNLFRHKHEIQSGRTSCVSHIVIGFDGDGNAMQGGECGGAVTLGGHTGAWDSAALSGSPPTESPRIVACCDLAGHEKYLKTTVSALTGLCLEYALLVVPANCGVSAIAREHLGLAFTLGIPVAIAVTKSDVASENALKKTRTQLATLLGARGTVVFVDATSTSPDIPSVAGEFMERRVTPVFIVSSVSGTNISLLRKFLGCLRHRSPIDSTQPPELRIDDAWNVPDVGVVVSGTLQVGSISPGDTLALGPCDDGSFLRAVVGSIHRQRRPSGGVGAGQMAALSLQGVTRDLVRRGMVLCDPLFELPACFEFEAELLVLCRDAVLAPKYQATVHCRGVRQTACVVRVGADGPTLPLCAGLAGGDCSTSKACKDCREPDGPPQQQQLRHGQRGVVRLRFVRRPECIAVGAPLVLVSSRTKASGVITRIVPCAAGPSCEVANAHATHVCPA* # ORIGINAL: g5722.t1 original gene structure, not modified by PASA NODE_3152_length_4177_cov_35.4393 AUGUSTUS gene 409 4043 . + . ID=g5722;Name=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS mRNA 409 4043 . + . ID=g5722.t1;Parent=g5722;Name=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 409 506 . + . ID=g5722.t1.exon1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 409 506 . + 2 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 741 833 . + . ID=g5722.t1.exon2;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 741 833 . + 0 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 1198 1267 . + . ID=g5722.t1.exon3;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 1198 1267 . + 0 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 1454 2305 . + . ID=g5722.t1.exon4;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 1454 2305 . + 2 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 2547 2597 . + . ID=g5722.t1.exon5;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 2547 2597 . + 2 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 2957 3172 . + . ID=g5722.t1.exon6;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 2957 3172 . + 2 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 3427 3499 . + . ID=g5722.t1.exon7;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 3427 3499 . + 2 ID=cds.g5722.t1;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS exon 3815 4043 . + . ID=g5722.t1.exon8;Parent=g5722.t1 NODE_3152_length_4177_cov_35.4393 AUGUSTUS CDS 3815 4043 . + 1 ID=cds.g5722.t1;Parent=g5722.t1 #PROT g5722.t1 g5722 FHDDNSPLHSPRGSCNDVSGFGSEVSGMQLLKENASMLEALETQNKELMKKAENADNPPHIEEQLRTFRLALEDHQRRHKQILELIELEKSIEIESERLAELRFQENTDDILTRQSSRKDSNTSNSNIISSSPQSPSPLSRNGSRQRSLRDQVGGLMRSSSKKKRSGGDAESLGRSMSGDELAGDATSDADDSFDDDAAASPILPAERRMLVIETSIVSDRLEYYKHRKVELKRAMRVGPAPDEQQHSRRSDRETSRFVEAVQEGDAAVARMCLENAIYKPAGTIAGGIASMAGFAPLHIAAMRGDVEMTRILLEFGAYPSPKDLFLYTPLDHALRSRSGDLVTILLRAELGPNASEADFQRILKSKRMEMEAKSVGSSAAGKTLLLANGWVNLEVLAASTENVWDELLVVPKRLAVGEPKMAPDMGKNSTSKEARPRIKGGSVDALIIELTAKDCGRNVVEAFLMTYQSFLSPESLLIKLIQRYRPPPDDVDAVIGFDLAAHRKTQRRVCLLLQKLITDNSADFTPEMHSVIHGFLFELKMDRACPAEASQLGKVFTYL # ORIGINAL: g11219.t1 original gene structure, not modified by PASA NODE_2639_length_5571_cov_40.7902 AUGUSTUS gene 4262 5571 . - . ID=g11219;Name=g11219.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS mRNA 4262 5571 . - . ID=g11219.t1;Parent=g11219;Name=g11219.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 4768 5571 . - . ID=g11219.t1.exon1;Parent=g11219.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 4768 5571 . - 0 ID=cds.g11219.t1;Parent=g11219.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 4262 4657 . - . ID=g11219.t1.exon2;Parent=g11219.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 4262 4657 . - 0 ID=cds.g11219.t1;Parent=g11219.t1 #PROT g11219.t1 g11219 EKKDEPAAKPTFSFGAPATTEKKDEPAAKPTFSFGAPATTEKKDESAKPTFSFGAASTAIESTPKPALSFAVPATAEPTPKPFSFAGAASTAEPAPKPFSFAGAASTATESAPKPALSFAVPATATEPTHKPFSFAGAASTATESNPKPALSFAVPTTATEPTPKPFSFGGTVPTAGAIPSLSFNPAAAAAPRSAETATALAFGGASESKPAFSFASSAMIEPPKTFSFGGASATAAAPGMPAFTFSGAAGQPSADAPKPAFVFGGAPATAPAAAPSFGFGGTQQQPAQGGAGNGSFAFGGAAAPTATTGAFAFGAAASPAPGAFQFGAAGSVPAFGQAATPTAGGFGFSMAAAAPASPAYSFAPAAAPAGGAAGGAIDFGLGQSTGERKILKPVRRRK* # ORIGINAL: g11216.t1 original gene structure, not modified by PASA NODE_2639_length_5571_cov_40.7902 AUGUSTUS gene 68 272 . - . ID=g11216;Name=g11216.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS mRNA 68 272 . - . ID=g11216.t1;Parent=g11216;Name=g11216.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 68 272 . - . ID=g11216.t1.exon1;Parent=g11216.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 68 272 . - 0 ID=cds.g11216.t1;Parent=g11216.t1 #PROT g11216.t1 g11216 MAHTRRLRAAGPQDIVRANQKDLFYAHFVREELADLCARVLGSRKATQWQREIQLVAAIAYFGLTTGI # ORIGINAL: g11217.t1 original gene structure, not modified by PASA NODE_2639_length_5571_cov_40.7902 AUGUSTUS gene 562 1860 . + . ID=g11217;Name=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS mRNA 562 1860 . + . ID=g11217.t1;Parent=g11217;Name=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 562 969 . + . ID=g11217.t1.exon1;Parent=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 562 969 . + 0 ID=cds.g11217.t1;Parent=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 1131 1541 . + . ID=g11217.t1.exon2;Parent=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 1131 1541 . + 0 ID=cds.g11217.t1;Parent=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS exon 1717 1860 . + . ID=g11217.t1.exon3;Parent=g11217.t1 NODE_2639_length_5571_cov_40.7902 AUGUSTUS CDS 1717 1860 . + 0 ID=cds.g11217.t1;Parent=g11217.t1 #PROT g11217.t1 g11217 MSDVDEDGPLSAVDAAKQRHKKEMKDLAARLQKLKHSVPKGDNKRKKEVAAETQKLEDETKARHAAELAAAQKEDASGSKDGANVSESKERGEDDGKPQEDEADQGDGGAVGTGRKPTRAQKRREKKDERSLERQKEIADEKARMGPAARDLERAALVSKLNPLGLRTAEIPPDGHCLYNALSHQLATSGFPESLSFQTLRLRAADYLRSHRDDFMPFLSTDSGDPMCDADYDEYCNSVEKTAAWGGEIEIRALSHLLHVSVEIFQAYSNTILVNEQYAGPKVRLSYHRHEYGLGEHYNSVVAAGVDPGQQQEQQQQHTE* # PASA_UPDATE: g11218.t1, single gene model update, valid-1, status:[pasa:asmbl_4694,status:12], valid-1 # PASA_UPDATE: g11218.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4693,status:12], valid-1 # PASA_UPDATE: g11218.t1.2.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_4695,status:12],[pasa:asmbl_4696,status:12], valid-1 NODE_2639_length_5571_cov_40.7902 . gene 2732 3706 . - . ID=g11218;Name=g11218.t1 NODE_2639_length_5571_cov_40.7902 . mRNA 2732 3706 . - . ID=g11218.t1;Parent=g11218;Name=g11218.t1 NODE_2639_length_5571_cov_40.7902 . five_prime_UTR 3622 3706 . - . ID=g11218.t1.utr5p1;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . five_prime_UTR 3284 3381 . - . ID=g11218.t1.utr5p2;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . exon 3622 3706 . - . ID=g11218.t1.exon1;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . exon 3250 3381 . - . ID=g11218.t1.exon2;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . CDS 3250 3283 . - 0 ID=cds.g11218.t1;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . exon 3101 3156 . - . ID=g11218.t1.exon3;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . CDS 3101 3156 . - 2 ID=cds.g11218.t1;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . exon 2732 3001 . - . ID=g11218.t1.exon4;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . CDS 2732 3001 . - 0 ID=cds.g11218.t1;Parent=g11218.t1 NODE_2639_length_5571_cov_40.7902 . mRNA 2732 3706 . - . ID=g11218.t1.1.5b6be70b;Parent=g11218;Name=g11218.t1 NODE_2639_length_5571_cov_40.7902 . five_prime_UTR 3629 3706 . - . ID=g11218.t1.1.5b6be70b.utr5p1;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . five_prime_UTR 3284 3381 . - . ID=g11218.t1.1.5b6be70b.utr5p2;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 3629 3706 . - . ID=g11218.t1.1.5b6be70b.exon1;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 3250 3381 . - . ID=g11218.t1.1.5b6be70b.exon2;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 3250 3283 . - 0 ID=cds.g11218.t1.1.5b6be70b;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 3101 3156 . - . ID=g11218.t1.1.5b6be70b.exon3;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 3101 3156 . - 2 ID=cds.g11218.t1.1.5b6be70b;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 2732 3001 . - . ID=g11218.t1.1.5b6be70b.exon4;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 2732 3001 . - 0 ID=cds.g11218.t1.1.5b6be70b;Parent=g11218.t1.1.5b6be70b NODE_2639_length_5571_cov_40.7902 . mRNA 2732 3706 . - . ID=g11218.t1.2.5b6be70b;Parent=g11218;Name=g11218.t1 NODE_2639_length_5571_cov_40.7902 . five_prime_UTR 3284 3706 . - . ID=g11218.t1.2.5b6be70b.utr5p1;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 3250 3706 . - . ID=g11218.t1.2.5b6be70b.exon1;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 3250 3283 . - 0 ID=cds.g11218.t1.2.5b6be70b;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 3101 3156 . - . ID=g11218.t1.2.5b6be70b.exon2;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 3101 3156 . - 2 ID=cds.g11218.t1.2.5b6be70b;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . exon 2732 3001 . - . ID=g11218.t1.2.5b6be70b.exon3;Parent=g11218.t1.2.5b6be70b NODE_2639_length_5571_cov_40.7902 . CDS 2732 3001 . - 0 ID=cds.g11218.t1.2.5b6be70b;Parent=g11218.t1.2.5b6be70b #PROT g11218.t1 g11218 MKSSFKQEHPFEKRKQEAQRIRQKYPDRIPVIVERDEKSDIAEIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVKNVLPPTSAAMAAIYEEQKDEDGFLYITYSGENTFGDAC* #PROT g11218.t1.1.5b6be70b g11218 MKSSFKQEHPFEKRKQEAQRIRQKYPDRIPVIVERDEKSDIAEIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVKNVLPPTSAAMAAIYEEQKDEDGFLYITYSGENTFGDAC* #PROT g11218.t1.2.5b6be70b g11218 MKSSFKQEHPFEKRKQEAQRIRQKYPDRIPVIVERDEKSDIAEIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVKNVLPPTSAAMAAIYEEQKDEDGFLYITYSGENTFGDAC* # PASA_UPDATE: g13643.t1, single gene model update, valid-1, status:[pasa:asmbl_9503,status:12],[pasa:asmbl_9505,status:12], valid-1 NODE_811_length_17428_cov_41.5421 . gene 387 3123 . + . ID=g13643;Name=g13643.t1 NODE_811_length_17428_cov_41.5421 . mRNA 387 3123 . + . ID=g13643.t1;Parent=g13643;Name=g13643.t1 NODE_811_length_17428_cov_41.5421 . five_prime_UTR 387 393 . + . ID=g13643.t1.utr5p1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 387 566 . + . ID=g13643.t1.exon1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 394 566 . + 0 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 781 835 . + . ID=g13643.t1.exon2;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 781 835 . + 1 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 1062 1151 . + . ID=g13643.t1.exon3;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 1062 1151 . + 0 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 1323 1399 . + . ID=g13643.t1.exon4;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 1323 1399 . + 0 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 1672 1705 . + . ID=g13643.t1.exon5;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 1672 1705 . + 1 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . exon 1959 3123 . + . ID=g13643.t1.exon6;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . CDS 1959 2927 . + 0 ID=cds.g13643.t1;Parent=g13643.t1 NODE_811_length_17428_cov_41.5421 . three_prime_UTR 2928 3123 . + . ID=g13643.t1.utr3p1;Parent=g13643.t1 #PROT g13643.t1 g13643 MVSLRHPHIVMFIGCCEEPELCLVTEFMPRGSVLEILQKEDAKMPWTRRLGMVLDAARGIQYLHTNNPIVLHCDLKAANLLVGDNYIVKVADFGLTKIAKKGMRAKNGSHLYASPEALRGCEYTVESDVYSFGIVMWEVLTAKIPYSDKLCSHSIESVVHSIVESDIRPTIPRTPHTRYTAVMTQCWQKDPSKRPGIADVATQLDRMIEIARQDDDESSVLGSSLANMIRASLDADGRMSGPALVFDERDLAIVQSGGLSSRKSSAGSLIAGMSGRKQSNSQMPPGKIFACRMHSGKFTLEPLQIAAFIGGAFDGNTAPAAGGLSDREIRYESIVSVSSFHQLMAQMGHPNCVVLELRGCAPEAAGVEPATPGAIRAIAEHDSRCDVAATATPVDGASANTPSTPTLSRVPSSRRGSMTTAAAAAAAAAAAGGASAVKRICLAMETEDEVLQWVVALKRVLHKRL* # ORIGINAL: g13648.t1 original gene structure, not modified by PASA NODE_811_length_17428_cov_41.5421 AUGUSTUS gene 15725 17136 . - . ID=g13648;Name=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS mRNA 15725 17136 . - . ID=g13648.t1;Parent=g13648;Name=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 17003 17136 . - . ID=g13648.t1.exon1;Parent=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 17003 17136 . - 0 ID=cds.g13648.t1;Parent=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 16613 16811 . - . ID=g13648.t1.exon2;Parent=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 16613 16811 . - 1 ID=cds.g13648.t1;Parent=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 15725 16411 . - . ID=g13648.t1.exon3;Parent=g13648.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 15725 16411 . - 0 ID=cds.g13648.t1;Parent=g13648.t1 #PROT g13648.t1 g13648 MFVKADRTYDFQKLREVTKVATRNLNRIIDINYYPVPEARKSNMRHRPIGLGVQGLADAFILMRFPFDSEEAAKLNREIFETIYFAALEASCELAQEEGTYETYAGSPVSKGVFQQDMWGVKPSSGLWDWDGLREKVAKHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNHHLLKDLTDRGLWNEDIKRKIIAGNGSIQEVTEIPADVRALYKTVWELSQKVLINMAADRGAYIDQSQSFNVHIAEPNYAKLSSMHFYAFKKGLKTGMYYLRTRPAANAIQFTVDQTKLASSNRTKEEIEKENEAAMLCSLQNKEACMSCSG* # ORIGINAL: g13646.t1 original gene structure, not modified by PASA NODE_811_length_17428_cov_41.5421 AUGUSTUS gene 10905 12852 . - . ID=g13646;Name=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS mRNA 10905 12852 . - . ID=g13646.t1;Parent=g13646;Name=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 12782 12852 . - . ID=g13646.t1.exon1;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 12782 12852 . - 0 ID=cds.g13646.t1;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 12317 12518 . - . ID=g13646.t1.exon2;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 12317 12518 . - 1 ID=cds.g13646.t1;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 11809 11976 . - . ID=g13646.t1.exon3;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 11809 11976 . - 0 ID=cds.g13646.t1;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 11256 11391 . - . ID=g13646.t1.exon4;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 11256 11391 . - 0 ID=cds.g13646.t1;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 10905 11110 . - . ID=g13646.t1.exon5;Parent=g13646.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 10905 11110 . - 2 ID=cds.g13646.t1;Parent=g13646.t1 #PROT g13646.t1 g13646 MTLVTTIVPAIGSVLAILMFLSPLPDIRRVLLTGNLGSLNYIPHGVLFVNCLGWIAYSVNTHDVAIFICNGVGCLLTGFYFLTCQEAANAEQRRRFRWVISVLSTVMFVGVSVGTFAVNSQHTRQLIFGFLCNAVLLAFYSSPLATIKTVVKSRSAATLSLPLCLTATVNASLWAGYGFALGDPFIYVPNAVGAFLSLIQVVLCCIFRGHSAASPTPDVNGNSGGKHNRYEELKAMGEGDDYEHEVPEVHELHGTDTVVV* # ORIGINAL: g13645.t1 original gene structure, not modified by PASA NODE_811_length_17428_cov_41.5421 AUGUSTUS gene 7561 9069 . - . ID=g13645;Name=g13645.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS mRNA 7561 9069 . - . ID=g13645.t1;Parent=g13645;Name=g13645.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 8734 9069 . - . ID=g13645.t1.exon1;Parent=g13645.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 8734 9069 . - 0 ID=cds.g13645.t1;Parent=g13645.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 7561 8547 . - . ID=g13645.t1.exon2;Parent=g13645.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 7561 8547 . - 0 ID=cds.g13645.t1;Parent=g13645.t1 #PROT g13645.t1 g13645 MRLARFSSVPIFVAFVSVLLAACMRPLDAQDAGTIALKLEDVGADVRLTITWTQYGELLLNLGSGCRGIPVSPGADGSKVFITVFTEAYLNGSCGFQYDLTPTLIKLAGPIQIMWKTSSRRQNVYQGTMVISRTLTSTSTFDTNVHGVDDNTVSAWVDIASHLAVCDEPSTTVLTVTTQSDVCLEQSFEASASALSLYAKTVDVRLVRADGTVQSILTGSIANMQDRISTTGGLRFWISTGDSICSGCEVFVSTLLGSTFNRTRRDETLTSTPPPAYRSTGFIFINLYSTSINNANGQTTDGGSGGSSASGVGIYAGAGAAGVAGIAAMALVVRRRRRAREHALRQADVDGQFAAANGPVYESRVLFGSEADVSTAAYSGADPSHALSSIGHIGGLAMYESTSVASLGFGSSATVHQLGMDAFNMPFEEVDAVEAEEEEA* # ORIGINAL: g13644.t1 original gene structure, not modified by PASA NODE_811_length_17428_cov_41.5421 AUGUSTUS gene 4099 7139 . - . ID=g13644;Name=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS mRNA 4099 7139 . - . ID=g13644.t1;Parent=g13644;Name=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 6990 7139 . - . ID=g13644.t1.exon1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 6990 7139 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 6425 6526 . - . ID=g13644.t1.exon2;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 6425 6526 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 6035 6214 . - . ID=g13644.t1.exon3;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 6035 6214 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 5516 5634 . - . ID=g13644.t1.exon4;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 5516 5634 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 5096 5282 . - . ID=g13644.t1.exon5;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 5096 5282 . - 1 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 4743 4892 . - . ID=g13644.t1.exon6;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 4743 4892 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 4304 4436 . - . ID=g13644.t1.exon7;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 4304 4436 . - 0 ID=cds.g13644.t1;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS exon 4099 4130 . - . ID=g13644.t1.exon8;Parent=g13644.t1 NODE_811_length_17428_cov_41.5421 AUGUSTUS CDS 4099 4130 . - 2 ID=cds.g13644.t1;Parent=g13644.t1 #PROT g13644.t1 g13644 MDDTVAVARPTDNGNGITVKSEPNAADGEGKFSRGRPERYEMLMRLGEGQIKLGHAEHVKDGVDRSALREIKILQEISHKNVLRLFDVFELEQNICLVLDFMEGDLEKIIKNKDVPFSAADVKSFLLMTLQGIEFLHSRWILHRDLKPNNLLIDANGVVKISDFGLARCFGSPNRQYTPKVVTVWYRPPELLFGARQYGTGVDIWSIGCIFAELMLRTPFLPGDGEMDQLTKIFSALGTPTEETWPGLTKLPDYVAYRSFPASSFRAMFSGASAEACELIGRMLKFYPPSRCTATDALQHPYFSTEPFPTAPEALPRPPRDSKEKDESRKRAIVDDDAAIGRKVVMRLEF* # PASA_UPDATE: g13647.t1, single gene model update, valid-1, status:[pasa:asmbl_9504,status:3], valid-1 NODE_811_length_17428_cov_41.5421 . gene 13420 15245 . + . ID=g13647;Name=g13647.t1 NODE_811_length_17428_cov_41.5421 . mRNA 13420 15245 . + . ID=g13647.t1;Parent=g13647;Name=g13647.t1 NODE_811_length_17428_cov_41.5421 . five_prime_UTR 13420 13475 . + . ID=g13647.t1.utr5p1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . exon 13420 13969 . + . ID=g13647.t1.exon1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . CDS 13476 13969 . + 0 ID=cds.g13647.t1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . exon 14094 14315 . + . ID=g13647.t1.exon2;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . CDS 14094 14315 . + 1 ID=cds.g13647.t1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . exon 14492 14585 . + . ID=g13647.t1.exon3;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . CDS 14492 14585 . + 1 ID=cds.g13647.t1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . exon 14881 15245 . + . ID=g13647.t1.exon4;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . CDS 14881 15153 . + 0 ID=cds.g13647.t1;Parent=g13647.t1 NODE_811_length_17428_cov_41.5421 . three_prime_UTR 15154 15245 . + . ID=g13647.t1.utr3p1;Parent=g13647.t1 #PROT g13647.t1 g13647 MIRNLCRRVVTTCHSALAPRSASHPQSPKIHASMMAQPFSTSSGEDHLARLTKCYVTDDGVEILGDTITRKGSQAHHDAFTAVFVHGNGFCRQTWDAIVEDMLTDVPFSAVSFDLRGHGGSGDIRGHPTWEQFRDDTIAVATSVKKESVKGGRRHPVVGVGHSMGSTCLLMAQLQDPTLFDALFLIEPIIFPPKALGEASVSPATGARYADMARKRRATFASMQAASEYFHKRLSTWDSRAVSGYVKGSFKHDTSGNGVSLRASPEQEVKLYTMNLNTVWDHLKDIRIPTVFVHGSRSWSHGDAMMAAMADEVGGPSRVISVDGASHVVNMEVPTRVATDAVEFFRQSLAIAPSHSHSKL* # PASA_UPDATE: g3162.t1, single gene model update, valid-1, status:[pasa:asmbl_2020,status:3], valid-1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . gene 419 3833 . - . ID=g3162;Name=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . mRNA 419 3833 . - . ID=g3162.t1;Parent=g3162;Name=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . five_prime_UTR 3731 3833 . - . ID=g3162.t1.utr5p1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . exon 2666 3833 . - . ID=g3162.t1.exon1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . CDS 2666 3730 . - 0 ID=cds.g3162.t1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . exon 1887 2440 . - . ID=g3162.t1.exon2;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . CDS 1887 2440 . - 0 ID=cds.g3162.t1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . exon 1011 1599 . - . ID=g3162.t1.exon3;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . CDS 1011 1599 . - 1 ID=cds.g3162.t1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . exon 419 872 . - . ID=g3162.t1.exon4;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . CDS 642 872 . - 0 ID=cds.g3162.t1;Parent=g3162.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . three_prime_UTR 419 641 . - . ID=g3162.t1.utr3p1;Parent=g3162.t1 #PROT g3162.t1 g3162 MSGRKSGQVPFPIAKMEEGLYTSTVELRPANARSYGSQSGPSYSEKSEKGCMATSRTVPTVVLVALVTACVVIGVGAGIGIGSAIFRSSGSSSSSGAPVTGAGSSLDNASGSSAPAVTSSSRPSLAHSSQAPMVTAAPSGLALSDSVILQPYAASTASNFPVRGPHSLSPTSLWGSIKGPYPTNTWWQNLVLGDGTFTIAPFPYQMQSKPNGLVICKPVANVVQLAITTQFLQNFVAGATEGLSSRVMSAYDDLSVRVTWSAGSSGTMASTIVRGSPFVTLEYASLTPSLTTQHAIMSVNGVTTQGTLSGTKFVVSLNNGQQWAIYTSASISIAWTSSGLSATAQQASIVVRIANAPNGQASEIAILDTYKDVYPTAGTVSAVANGDTSVVSFSFTSRSMSGASNPDGLLLTALPHHVDVLPSASIVSGLSYSTIRGAAVGAVGSVWTMTEGLTTVAWSSPRSIPSDKLSAISAALTYDVGNITMTKGDTYFGGKEVAKYARLALIADETGASALATAARQKVQDRIDAFFNGAMSDNIMYDPTWGGLVTMASAGDPGSDFGFGYYNDHHFHLGYFLYAAAAVGKSNTAWLSSRAPILREFARDFANPSTVDAYYPRFRNFDWFEGHSWAAGLFAFADNRNQESTSEAINGYYGLYLLGVALNDANIRDTGRLLLALEMRSAMKYWQIPSTSQIYPAPFNANTMVGMVWSTKADYATWFGANVEFIHCIQMLPFTPITEDYLHSFFITTEYPVLATSLTRGNPAIEMGWRGYVYMAHAIIDKTAAWTEVQSLSAYDDGNTATNTLYWVATRA* # ORIGINAL: g3163.t1 original gene structure, not modified by PASA NODE_1575_length_10387_cov_42.4204_potentialcontaminant AUGUSTUS gene 4781 6865 . - . ID=g3163;Name=g3163.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant AUGUSTUS mRNA 4781 6865 . - . ID=g3163.t1;Parent=g3163;Name=g3163.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant AUGUSTUS exon 4781 6865 . - . ID=g3163.t1.exon1;Parent=g3163.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant AUGUSTUS CDS 4781 6865 . - 0 ID=cds.g3163.t1;Parent=g3163.t1 #PROT g3163.t1 g3163 MKEDDDDTKASAATLNEQDSPVLAAQTGLQMALAVDRRPDASAHANDGQYVIEEGLLTNAWADLWTAAATAGGQTLIPTPASRSIAPSYSDRAMHGMDRSWQAGVVPSTVPRDPTPPQWTDALEPAHAHAGRVRNANKMAETRSGAIGLERGGQYDASILQAQSIPQQHRTSKESQLPPLTTTAGVQFLPRASPQYFPTVASGDARASPSARLNILSDFLRSIAPPVHPNAQTGHVQHSDYSTGHPCDARARSKSQTAWRLPPSTAYNVDTTDSGSARQSNSDHTEERHSKVHVRSREEGTHTVEVLSPIGAVNDSGPLYGHAAANLSHGKPDTWPLISPRVLPEQSYFPSLMAQLDALERLSACNSSVAGNEPEEYAGSDDDSFAEEKDDASETIHNDGSEMPAEPTRRWMGEDGSREHVSGTRGDQASPTSVQQPAFSNDIHNFDTVEGARRHSNDATETRHNAQMNALRLSRKRKRPSESPISHDRATEESAPASRIGHFVRARTQRDQQDWSDASTHGMHGANGGDNFAFSPLLGDSVPPPSLSLEMLPHTLNESYLQNELSPITFSAFDQPTSAYFQEAQDGRAIGRFIPPSASQWLDVGTPAEYHRTGAVYPQHQQPSGNIVTTDATVASGHRAENTTATKSKPISNHMMQAIVDAALVKSEDRKRQSDIAEMVKSRIYGAYYKPNSQ* # PASA_UPDATE: g3164.t1, single gene model update, valid-1, status:[pasa:asmbl_2019,status:12], valid-1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . gene 9348 9874 . - . ID=g3164;Name=g3164.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . mRNA 9348 9874 . - . ID=g3164.t1;Parent=g3164;Name=g3164.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . exon 9348 9874 . - . ID=g3164.t1.exon1;Parent=g3164.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . CDS 9482 9874 . - 0 ID=cds.g3164.t1;Parent=g3164.t1 NODE_1575_length_10387_cov_42.4204_potentialcontaminant . three_prime_UTR 9348 9481 . - . ID=g3164.t1.utr3p1;Parent=g3164.t1 #PROT g3164.t1 g3164 MAEPKIALGKLKPDDLPAGVGSDGEMTVAEQDTVASPSPLLPSRHTSINPSTMLQGMFNAIRKNSGRLNAVEPARNAQPPSPSPMGGRGVEGSLNLRPISALDDGTQSTGDAANALPIGSVSVDVAAEDM* # ORIGINAL: g7477.t1 original gene structure, not modified by PASA NODE_2767_length_5175_cov_38.2502 AUGUSTUS gene 1 4593 . - . ID=g7477;Name=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS mRNA 1 4593 . - . ID=g7477.t1;Parent=g7477;Name=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 4584 4593 . - . ID=g7477.t1.exon1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 4584 4593 . - 0 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 4174 4364 . - . ID=g7477.t1.exon2;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 4174 4364 . - 2 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 3650 3863 . - . ID=g7477.t1.exon3;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 3650 3863 . - 0 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 2961 3299 . - . ID=g7477.t1.exon4;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 2961 3299 . - 2 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 2291 2676 . - . ID=g7477.t1.exon5;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 2291 2676 . - 2 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 1670 1886 . - . ID=g7477.t1.exon6;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 1670 1886 . - 0 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 1205 1412 . - . ID=g7477.t1.exon7;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 1205 1412 . - 2 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 721 932 . - . ID=g7477.t1.exon8;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 721 932 . - 1 ID=cds.g7477.t1;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS exon 1 468 . - . ID=g7477.t1.exon9;Parent=g7477.t1 NODE_2767_length_5175_cov_38.2502 AUGUSTUS CDS 1 468 . - 2 ID=cds.g7477.t1;Parent=g7477.t1 #PROT g7477.t1 g7477 MEEAYCSWWDAMPLVSRLMSRAGSIHPTQAFVTNPVDAPSKRVWPTSGSYKDRLVFFAGLTEDSTDQNDMYLLNVTSWTWEQLSYACPQSGLVGHTFAPTSSADRRSLRLDATCSVDRTPTVDTLARRLIATLGTSPYATSKPASLTTFLTDQKDSIANYTTEVEGYIATALSRLAAANATDQASVNVALANFTSLWQPLAGSSEKAGFTYCGDYFCPIVNCTLPPRVSGARMVTIGDDLLFLDGNQCNTQGTGGGYDCYIAEYYAFNVPSRTWRKVPTTGDATMDKKIQNGTRPTLANFRYPATVGQTIFDFGGAFRDFAMDWFYFNDVWALDTTSWVWSTMKVSGQVPQPTWSHTMFNVNGSLVLFGGCRSPNRFFNDVHILSHMDISASNAYAVGSGIESGVVAVDSTFTVILRDSENKTLTFGGRQVSVFGFDSTGSTFQGSVYNSGRGFYNVTYQTTQAGRYRLSVKVDLTDIPGSPFVVTIAPSAPFASSSSIVGRASFEPVVGVSSKLTVAINDRFNNRITVIPEPFDVSVEGPASVSHTVLLNADGLYYIACTFEATGVYNMSVRLHGVDIGSSPFLVTLGAAPAVDDVCHIHRNQGVMLIEAPASVRRYATPAIAVIVVFAVIFAIEVAMVPLATRRFAGVIGRQSVISAPVDVYSMRWNQTNIIKLATIMLQIVQIHAIVLNARVSDDFVDTAGTVFSSVGASSFSASFRWYFWVIMSVTQLWLFYAVVFIVDGGTAL # ORIGINAL: g3166.t1 original gene structure, not modified by PASA NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS gene 4395 4910 . - . ID=g3166;Name=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS mRNA 4395 4910 . - . ID=g3166.t1;Parent=g3166;Name=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 4848 4910 . - . ID=g3166.t1.exon1;Parent=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 4848 4910 . - 0 ID=cds.g3166.t1;Parent=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 4618 4722 . - . ID=g3166.t1.exon2;Parent=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 4618 4722 . - 0 ID=cds.g3166.t1;Parent=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 4395 4463 . - . ID=g3166.t1.exon3;Parent=g3166.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 4395 4463 . - 0 ID=cds.g3166.t1;Parent=g3166.t1 #PROT g3166.t1 g3166 MSDKPSIGQRIDSAINAGSNKMSELEARGAKEREKDTMKNQDNSMMDRAGAGIAAAGDKVRETFAGSKADAEYDRAKK* # ORIGINAL: g3165.t1 original gene structure, not modified by PASA NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS gene 1 2316 . - . ID=g3165;Name=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS mRNA 1 2316 . - . ID=g3165.t1;Parent=g3165;Name=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 2238 2316 . - . ID=g3165.t1.exon1;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 2238 2316 . - 0 ID=cds.g3165.t1;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 824 1976 . - . ID=g3165.t1.exon2;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 824 1976 . - 2 ID=cds.g3165.t1;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 648 716 . - . ID=g3165.t1.exon3;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 648 716 . - 1 ID=cds.g3165.t1;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 290 371 . - . ID=g3165.t1.exon4;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 290 371 . - 1 ID=cds.g3165.t1;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS exon 1 124 . - . ID=g3165.t1.exon5;Parent=g3165.t1 NODE_2437_length_6286_cov_38.4077_potentialcontaminant AUGUSTUS CDS 1 124 . - 0 ID=cds.g3165.t1;Parent=g3165.t1 #PROT g3165.t1 g3165 MKHVTIILGVVCIALVASTATAAPHKADSRSISRRLSDSLFQGYRQAVQDFFYYFRSQYDCEQFSSLEQLPLATLPTFQNFQCNRANGSTTPSSSSSAVLPESSAAPSVVASSASFLPQSLIPIASLSDIIFSVEPSASASASAQPAESSSQAPQPSSDEPYNFGACELSKGNAQFLWTLAENTNRDCSDNFAAPPGWTLVTVLNVSQLEIPDAQIPSIAFGAVYSRGLSAITIPTSGIPSASSSSEAESSSASSTQESSTFIEPSSQAIESSIPLLPTLVLPSGSLSEAPPVESVAASQSGDAPVLLYVFRNHRAIQSFAQGDNKDAETASAPFLEGTVLNATLDSYLLIREKVVAIAKAALQLNAETQIVMDGASFGGALAQVAAFDTAKSLGITKPQQMIATTFGSIRTGDIEFARAFNKIVKGSIRVVNSEDLVPTLPPAIWEDFNTGDKKFLEHVQGLIVGFTNNTRDYYTNHIDAYQSFVDRDYPTLWDSCTNTGA # PASA_UPDATE: g1044.t1, single gene model update, valid-1, status:[pasa:asmbl_5638,status:12], valid-1 NODE_3154_length_4168_cov_43.6066 . gene 170 504 . + . ID=g1044;Name=g1044.t1 NODE_3154_length_4168_cov_43.6066 . mRNA 170 504 . + . ID=g1044.t1;Parent=g1044;Name=g1044.t1 NODE_3154_length_4168_cov_43.6066 . five_prime_UTR 170 170 . + . ID=g1044.t1.utr5p1;Parent=g1044.t1 NODE_3154_length_4168_cov_43.6066 . exon 170 504 . + . ID=g1044.t1.exon1;Parent=g1044.t1 NODE_3154_length_4168_cov_43.6066 . CDS 171 383 . + 0 ID=cds.g1044.t1;Parent=g1044.t1;5_prime_partial=true NODE_3154_length_4168_cov_43.6066 . three_prime_UTR 384 504 . + . ID=g1044.t1.utr3p1;Parent=g1044.t1 #PROT g1044.t1 g1044 YRRTLEDSFEAVVGAEEVLDTARTLQSVARNIEKQLGDEIRLSRAQSLVGSTDRLVDSTRRPNVGISDAR* # ORIGINAL: g1045.t1 original gene structure, not modified by PASA NODE_3154_length_4168_cov_43.6066 AUGUSTUS gene 1705 3846 . - . ID=g1045;Name=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS mRNA 1705 3846 . - . ID=g1045.t1;Parent=g1045;Name=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS exon 3730 3846 . - . ID=g1045.t1.exon1;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS CDS 3730 3846 . - 0 ID=cds.g1045.t1;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS exon 3350 3442 . - . ID=g1045.t1.exon2;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS CDS 3350 3442 . - 0 ID=cds.g1045.t1;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS exon 3099 3198 . - . ID=g1045.t1.exon3;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS CDS 3099 3198 . - 0 ID=cds.g1045.t1;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS exon 2714 2826 . - . ID=g1045.t1.exon4;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS CDS 2714 2826 . - 2 ID=cds.g1045.t1;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS exon 1705 1779 . - . ID=g1045.t1.exon5;Parent=g1045.t1 NODE_3154_length_4168_cov_43.6066 AUGUSTUS CDS 1705 1779 . - 0 ID=cds.g1045.t1;Parent=g1045.t1 #PROT g1045.t1 g1045 MAEQPRKELIINEILVMKAATHPNIVNYVDSYLVEGNLWVIMEYMQGGSLTDVIDTTVLSEPQMAAVCRESLQGLRHLHSKGIIHRDIKSDNVLLDVDGSIKLTDFGFCAQLNEKSKRTTMVGTPYWMAPEVVKQKEYGPKHPFLARACPLSQLTPVIQSVVSSK* # ORIGINAL: g8393.t1 original gene structure, not modified by PASA NODE_1200_length_13169_cov_41.8592 AUGUSTUS gene 9746 10803 . + . ID=g8393;Name=g8393.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS mRNA 9746 10803 . + . ID=g8393.t1;Parent=g8393;Name=g8393.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS exon 9746 10476 . + . ID=g8393.t1.exon1;Parent=g8393.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS CDS 9746 10476 . + 0 ID=cds.g8393.t1;Parent=g8393.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS exon 10659 10803 . + . ID=g8393.t1.exon2;Parent=g8393.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS CDS 10659 10803 . + 1 ID=cds.g8393.t1;Parent=g8393.t1 #PROT g8393.t1 g8393 MADVSADLLLNGNYMLFDFNDVMSGSGHLSDPLVCDLDACLDESPLFPDDGLLATMSPPSSVGDDVDMSAQIADDIKRKRAHLASEKKRRNNIKSAFDDMKDLIPAYKNFPNLKNSKETVLRKAIEYIKYLVRQRALMAQEIKTLKDIVRSNGLDVPAAPTSDAAISIKEDPDAATAAFPEGVKTLVFLALVDVFFESFQAHVKVGSPEEFSVSLMAWVQAYCRPDRLRDLIALSVKNVATGFSPATDRSSCLVRKWTDCLHRCNVAAFDGTAVAKVRGVFASVAAHCVPW* # PASA_UPDATE: g8391.t1, single gene model update, valid-1, status:[pasa:asmbl_772,status:12],[pasa:asmbl_773,status:12], valid-1 NODE_1200_length_13169_cov_41.8592 . gene 93 3640 . + . ID=g8391;Name=g8391.t1 NODE_1200_length_13169_cov_41.8592 . mRNA 93 3640 . + . ID=g8391.t1;Parent=g8391;Name=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 93 225 . + . ID=g8391.t1.exon1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 93 225 . + 0 ID=cds.g8391.t1;Parent=g8391.t1;5_prime_partial=true NODE_1200_length_13169_cov_41.8592 . exon 650 744 . + . ID=g8391.t1.exon2;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 650 744 . + 2 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 1034 1181 . + . ID=g8391.t1.exon3;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 1034 1181 . + 0 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 1379 1523 . + . ID=g8391.t1.exon4;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 1379 1523 . + 2 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 1907 2021 . + . ID=g8391.t1.exon5;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 1907 2021 . + 1 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 2464 2503 . + . ID=g8391.t1.exon6;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 2464 2503 . + 0 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 2953 3253 . + . ID=g8391.t1.exon7;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 2953 3253 . + 2 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . exon 3443 3640 . + . ID=g8391.t1.exon8;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . CDS 3443 3533 . + 1 ID=cds.g8391.t1;Parent=g8391.t1 NODE_1200_length_13169_cov_41.8592 . three_prime_UTR 3534 3640 . + . ID=g8391.t1.utr3p1;Parent=g8391.t1 #PROT g8391.t1 g8391 ARKMKGGVRWLMTFVIGALVALIFKLVQYLSEYAIEEKYAFVYKYVADDNFGMMWLINFLITGGMALIGVFCVLYEPTAGSSGIPEVMAFLNGIDMEKTLTMTTLICKIVGLTAAVGANLCLGNEGPMIHIGAMVALQLVRGFHMFKWWRSFIERAGKTETLRNERDERMMIAIGAATGLAAAFHAPIGGVIFVIEEAISFFSPRLVFRTYMNYDGDVQSDSVAQGFGSLGLMTSVLICPDGRTFESEAAHGTVTRHYRDHVAGKETSTNPIASIFAWTRGLAHRAKLDGNAALAHFATTLEAVCVETIESGHMTKDLALCVLGNKVTRKDYLNTFEFIDKLALNLKAKVKLSKL* # PASA_UPDATE: g8394.t1, single gene model update, valid-1, status:[pasa:asmbl_771,status:12], valid-1 NODE_1200_length_13169_cov_41.8592 . gene 11461 13027 . - . ID=g8394;Name=g8394.t1 NODE_1200_length_13169_cov_41.8592 . mRNA 11461 13027 . - . ID=g8394.t1;Parent=g8394;Name=g8394.t1 NODE_1200_length_13169_cov_41.8592 . five_prime_UTR 12886 13027 . - . ID=g8394.t1.utr5p1;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . exon 12856 13027 . - . ID=g8394.t1.exon1;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . CDS 12856 12885 . - 0 ID=cds.g8394.t1;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . exon 11893 12576 . - . ID=g8394.t1.exon2;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . CDS 11893 12576 . - 0 ID=cds.g8394.t1;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . exon 11461 11618 . - . ID=g8394.t1.exon3;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . CDS 11484 11618 . - 0 ID=cds.g8394.t1;Parent=g8394.t1 NODE_1200_length_13169_cov_41.8592 . three_prime_UTR 11461 11483 . - . ID=g8394.t1.utr3p1;Parent=g8394.t1 #PROT g8394.t1 g8394 MERLGRDRMQLHTDLQAMREWVSLNVSDHAGFHHRQRTLGMLLTQLSPAHDKSTAHEHELHSNDNVDAEIDRCTAVFERLSRMASDSIKQSTSAPTRVEEVIAATLRCKSCALAASEVALTRDLIERYPGHEAPWNHLRHSVWELWRCVAVHVAQLELDDFCDPSRTSTALTGDAAGCVGATKVTLADAFSSIPEDAGITWLDAVLRWCEDIAAEDTQARFELQRDCARACELWIIDNCRDGSDRSSRRKEVLGLLCATQSVRYNYYASSTATPHPSPQHSC* # ORIGINAL: g8392.t1 original gene structure, not modified by PASA NODE_1200_length_13169_cov_41.8592 AUGUSTUS gene 4018 5465 . - . ID=g8392;Name=g8392.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS mRNA 4018 5465 . - . ID=g8392.t1;Parent=g8392;Name=g8392.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS exon 4737 5465 . - . ID=g8392.t1.exon1;Parent=g8392.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS CDS 4737 5465 . - 0 ID=cds.g8392.t1;Parent=g8392.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS exon 4018 4620 . - . ID=g8392.t1.exon2;Parent=g8392.t1 NODE_1200_length_13169_cov_41.8592 AUGUSTUS CDS 4018 4620 . - 0 ID=cds.g8392.t1;Parent=g8392.t1 #PROT g8392.t1 g8392 MPAQVTVSPSIDYSAQAPVLVSATFLGRVSQLPVITSAVGTVSTFYTTTKAKSPLVKSTLESVESTVTTLTAKAKPIIESPIVSQIDTYACRGLDTLEREFPALLEPTDRLVAEGKKLIEDTVRSSKTKIEETARVAVQSSSERFSQIREPTERLVKDAVTAVDARVRPQLEAALTAVERLLPEEATASQEASPASDANIPERVKLISTKVQKRVYSRALSEIKNVQLRSHEALQNYHFTVDLIKYAQDNLDVQTKNLKSLQQQIEHTVELSIAKGKETAAQGVEYVRQRREVQRSLEAASKVAFQLRTRAAELHVPEAVRVRYDALSASLLDVYTRAQAEEREDDGEYVKKARQLVHLAQEATKAIAAARDETTKVIAQAKEDTAKVVSSAKDIAGQYSAPFSAYTAPVALYLQQAYAYVLSFYPAAAATATAAPELNGASQ* # ORIGINAL: g13249.t1 original gene structure, not modified by PASA NODE_3681_length_2967_cov_35.8748 AUGUSTUS gene 749 2465 . - . ID=g13249;Name=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS mRNA 749 2465 . - . ID=g13249.t1;Parent=g13249;Name=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS exon 2424 2465 . - . ID=g13249.t1.exon1;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS CDS 2424 2465 . - 0 ID=cds.g13249.t1;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS exon 2048 2168 . - . ID=g13249.t1.exon2;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS CDS 2048 2168 . - 0 ID=cds.g13249.t1;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS exon 1411 1718 . - . ID=g13249.t1.exon3;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS CDS 1411 1718 . - 2 ID=cds.g13249.t1;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS exon 1121 1231 . - . ID=g13249.t1.exon4;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS CDS 1121 1231 . - 0 ID=cds.g13249.t1;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS exon 749 898 . - . ID=g13249.t1.exon5;Parent=g13249.t1 NODE_3681_length_2967_cov_35.8748 AUGUSTUS CDS 749 898 . - 0 ID=cds.g13249.t1;Parent=g13249.t1 #PROT g13249.t1 g13249 MIVFLSDVHLDRPKTLERLRMLFTGYASVVPMAFVLIGNFLAEPHGPGQYAALKEGFAALADIVSSFESIANGSQFVIVPGPLDPGPGNIMPRPPIPSVLTSAFAEKIPGVHFATNPCRIRYCTQEIVVSREDILNKMRRNCILKPSEAELDDVSKHLVKTLLDQSHLCPLPLHVRPIYWAFDSALRLYPLPTAVVLADKYEPYSVNYEGCLCFNPGSFPASDFSFMVYWPHRKEAEFSKVDM* # ORIGINAL: g12577.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 16338 18089 . - . ID=g12577;Name=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 16338 18089 . - . ID=g12577.t1;Parent=g12577;Name=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 17347 18089 . - . ID=g12577.t1.exon1;Parent=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 17347 18089 . - 0 ID=cds.g12577.t1;Parent=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 16975 17089 . - . ID=g12577.t1.exon2;Parent=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 16975 17089 . - 1 ID=cds.g12577.t1;Parent=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 16338 16568 . - . ID=g12577.t1.exon3;Parent=g12577.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 16338 16568 . - 0 ID=cds.g12577.t1;Parent=g12577.t1 #PROT g12577.t1 g12577 MAQRGVLVPLVSPAAHVDDAESRLDALRRATPIAASSMKLDAHTRGGVYDSLDGSEEGEEDEEFVLCAVLEDTETSPSPSTLRLALIPARTRDGNGAAASHSAVDEHRSQFASFGGVSSGSACADVVRTAAESHRSRSLDGRRRVVVTLPLAHPSLISETVAALSSTPNDVLRVLRWAHAAATSVHTGNTGHGRATARLHPLPLSPSPSSSPSPSSSLAVSTDVVIRLVVHPQTALKLANEMAGDIAWGKRIASVVGAHARSEETKAWLSTLGGAHSSLGEGSSVHAEIAGRLALAQLRVAAETGDVSLVGQCLVFIAYSLLQRELLPQARGVIAVASAIARSLKPRSDKVPASLPRCQLFT* # PASA_UPDATE: g12576.t1, single gene model update, valid-1, status:[pasa:asmbl_2660,status:3], valid-1 NODE_17_length_65977_cov_44.7711 . gene 12947 15342 . + . ID=g12576;Name=g12576.t1 NODE_17_length_65977_cov_44.7711 . mRNA 12947 15342 . + . ID=g12576.t1;Parent=g12576;Name=g12576.t1 NODE_17_length_65977_cov_44.7711 . five_prime_UTR 12947 13163 . + . ID=g12576.t1.utr5p1;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . exon 12947 13441 . + . ID=g12576.t1.exon1;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . CDS 13164 13441 . + 0 ID=cds.g12576.t1;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . exon 13679 14253 . + . ID=g12576.t1.exon2;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . CDS 13679 14253 . + 1 ID=cds.g12576.t1;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . exon 14416 15342 . + . ID=g12576.t1.exon3;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . CDS 14416 15059 . + 2 ID=cds.g12576.t1;Parent=g12576.t1 NODE_17_length_65977_cov_44.7711 . three_prime_UTR 15060 15342 . + . ID=g12576.t1.utr3p1;Parent=g12576.t1 #PROT g12576.t1 g12576 MSTQACHTGGTCHVSCGAIKCRGQATPTQLRPHEAAEGDRTTATCCRGLLDLPTDIVERILLDTPAHVIGSRELCALDMTCKPLRPLTERVARTRLVRRSGGLTGAPALLSAVVPAADPSLSVVVDVTAGVVRIDAPPHHFNSLWKRVLGACEARDACAAAERALFSRRMRALVTPHAAHVTFGAAALGPGVVGGTGVGRLHPGVLHAVQTLARSTSLRSLAVEMDHVDPSLGLIGDDLLNMSIVAEFSLGTGGVSFTMAARVESPHGVVYAPCAASRVTCSMEGAHDAVVLEHHVDEWEPFAPRDTRGFLRHTDIFPSSPPSAAPFLHAARALIASESKQCGGHRSSAGAAGQPSDLDWAVAVALIVRCCCMAAFMRPASFDRYTRRESAFVHAMRQRAAAMRRAGSPGAFNGPGHEDRAMHCPCLDNARAYAAEPPSNCTSSECVSQARAMVAALIRRHPDHYDWQRYHELSGVDVVLRGLQDELATAAAASASGA* # PASA_UPDATE: g12573.t1, single gene model update, valid-1, status:[pasa:asmbl_2663,status:12], valid-1 NODE_17_length_65977_cov_44.7711 . gene 1724 5777 . - . ID=g12573;Name=g12573.t1 NODE_17_length_65977_cov_44.7711 . mRNA 1724 5777 . - . ID=g12573.t1;Parent=g12573;Name=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 4203 5777 . - . ID=g12573.t1.exon1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 4203 5777 . - 0 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 3830 4063 . - . ID=g12573.t1.exon2;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 3830 4063 . - 0 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 3443 3570 . - . ID=g12573.t1.exon3;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 3443 3570 . - 0 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 3113 3230 . - . ID=g12573.t1.exon4;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 3113 3230 . - 1 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 2518 2694 . - . ID=g12573.t1.exon5;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 2518 2694 . - 0 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 2152 2333 . - . ID=g12573.t1.exon6;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 2152 2333 . - 0 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . exon 1724 1982 . - . ID=g12573.t1.exon7;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . CDS 1901 1982 . - 1 ID=cds.g12573.t1;Parent=g12573.t1 NODE_17_length_65977_cov_44.7711 . three_prime_UTR 1724 1900 . - . ID=g12573.t1.utr3p1;Parent=g12573.t1 #PROT g12573.t1 g12573 MASSATGDGEDHAPHASRRAQLASCVHRCLDLFLHEDAVFFAERLRAEAGPGNDDALYLLALAHQRSGNPSRAHAVLRDRAVAASISGRPAPHAMRCLFARVCIDTDRLEEIEHVVVGATGECPEDPHGAAACLAGHACRRANRWSRAEAHYRQALATNNMLWSPFEGLCRMGCAADPDAVYPASTDADAEDIVEDVSRDGRPTHRHQTQQHPHHKDGHNDSMDVSFTLNMPGAAGVGMAAILATPGAATPRTPFVVQGLRASSPQSPAQATPSPMPAYSTSTPASVAPPPARKVAPARLFASSGPSAGSSVAAAPPAVAAPRKRAKVASTPEAQLQSSLGRAQQQQSTQASPPVGVRTRSRSANVASGGSGSDTGAPTPRPSTTATAGAAGQAPARGGRSSARSRVDAQSQQQQQQQQQQQQQQPHATVTFSLPDDSFTGDMEVDGRSRVAAGEGSGMISAVVGGRRLVRALLKVIAVAYAALMRYDCKAAIALFAALPSEHTESPWVTCQVARAHFELAQYQESARLYAAARSADAHFTEGMETYSTALWHLRDEQALSSLATALIDADRRSPQGWCAAGNCFSAHKEHAAAVRLFERAVQVDPHFAYGYTLLGHEYVANEDFDRALVCFRAAIRADSRHYNAWYGLGMIFYRQEKYEAAQFHFERALAINPSSPILHCYLGLVLNARGESALALEVLDRASAIDDTLPLVHFNRATVLYAMEKYEASAALQSVRHGGESWRDAVAILTRLKDLAPREASVYLLLARVYRRMGKTANAQLYQAWAAEIDPRGLAEGAMEGADRHDGGDEQDDPLGGAPVVGAGAETATP* # PASA_UPDATE: g12588.t1, single gene model update, valid-1, status:[pasa:asmbl_2662,status:12], valid-1 NODE_17_length_65977_cov_44.7711 . gene 57916 58941 . + . ID=g12588;Name=g12588.t1 NODE_17_length_65977_cov_44.7711 . mRNA 57916 58941 . + . ID=g12588.t1;Parent=g12588;Name=g12588.t1 NODE_17_length_65977_cov_44.7711 . five_prime_UTR 57916 57954 . + . ID=g12588.t1.utr5p1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . exon 57916 58051 . + . ID=g12588.t1.exon1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . CDS 57955 58051 . + 0 ID=cds.g12588.t1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . exon 58205 58254 . + . ID=g12588.t1.exon2;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . CDS 58205 58254 . + 2 ID=cds.g12588.t1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . exon 58620 58723 . + . ID=g12588.t1.exon3;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . CDS 58620 58723 . + 0 ID=cds.g12588.t1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . exon 58839 58941 . + . ID=g12588.t1.exon4;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . CDS 58839 58923 . + 1 ID=cds.g12588.t1;Parent=g12588.t1 NODE_17_length_65977_cov_44.7711 . three_prime_UTR 58924 58941 . + . ID=g12588.t1.utr3p1;Parent=g12588.t1 #PROT g12588.t1 g12588 MATISSKASRGAQGVVCVGLLLLIHAAVSAVQFRGYVTLTGDDDIVPLDIRVQTVIGFLICLCGYAMLSGPYKNIRSFADAAQTSLHSSDSRPSFHTFNHRGRVLFATPSQ* # ORIGINAL: g12574.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 6491 8961 . + . ID=g12574;Name=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 6491 8961 . + . ID=g12574.t1;Parent=g12574;Name=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 6491 6861 . + . ID=g12574.t1.exon1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 6491 6861 . + 0 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 6998 7142 . + . ID=g12574.t1.exon2;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 6998 7142 . + 1 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 7301 7535 . + . ID=g12574.t1.exon3;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 7301 7535 . + 0 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 7657 7787 . + . ID=g12574.t1.exon4;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 7657 7787 . + 2 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 7984 8151 . + . ID=g12574.t1.exon5;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 7984 8151 . + 0 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 8530 8667 . + . ID=g12574.t1.exon6;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 8530 8667 . + 0 ID=cds.g12574.t1;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 8833 8961 . + . ID=g12574.t1.exon7;Parent=g12574.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 8833 8961 . + 0 ID=cds.g12574.t1;Parent=g12574.t1 #PROT g12574.t1 g12574 MDGRGPRIGANAGAAPTFQVLPVQKIAQIMTELSIPFTEDDVMHPKPAQLRGIFESFLEALMGITKDDLQQPQFSWIDHLDYPELYEECIPEAIFNKTVKNLMETCGVHDFSLSDILEPEPKRIKLILSALINFVKFREECLMRIQPSLDAIDQLQEKKRQLEAKNQDLQTQVRQNRAVRAEQQPMVDELRAQEKDVTADINEHNVRQAGLHADIRRLKEDIAAVAERVAESKYKALNAVQDCARLKTQIVPDPERVRRELAEMAVQLSSDKENLAGHERRARELLAKIESLSKVEGEVQRTMASMGEVEIELERHRAVLRTIESVNDSAQTQQLRLREMTAREQASCVCAEMKRSAAEAAADAVRKERAAVESERVAAQSKVDANEAQSLQLAEKMAEMHQTHQSEMGALREDYARLHDQVGEYHRTLLQSLTDAVS* # PASA_UPDATE: g12585.t1, single gene model update, valid-1, status:[pasa:asmbl_2659,status:3], valid-1 NODE_17_length_65977_cov_44.7711 . gene 47122 53035 . - . ID=g12585;Name=g12585.t1 NODE_17_length_65977_cov_44.7711 . mRNA 47122 53035 . - . ID=g12585.t1;Parent=g12585;Name=g12585.t1 NODE_17_length_65977_cov_44.7711 . five_prime_UTR 52742 53035 . - . ID=g12585.t1.utr5p1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 52343 53035 . - . ID=g12585.t1.exon1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 52343 52741 . - 0 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 51551 51646 . - . ID=g12585.t1.exon2;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 51551 51646 . - 0 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 51104 51313 . - . ID=g12585.t1.exon3;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 51104 51313 . - 0 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 50123 50832 . - . ID=g12585.t1.exon4;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 50123 50832 . - 0 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 49208 49815 . - . ID=g12585.t1.exon5;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 49208 49815 . - 1 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . exon 47122 48882 . - . ID=g12585.t1.exon6;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . CDS 47285 48882 . - 2 ID=cds.g12585.t1;Parent=g12585.t1 NODE_17_length_65977_cov_44.7711 . three_prime_UTR 47122 47284 . - . ID=g12585.t1.utr3p1;Parent=g12585.t1 #PROT g12585.t1 g12585 MPRATLHFGTHLLVALLLCILSTAVLLTAHAASISSSVIKPNFRLGNILSLTGVVGDTDRENGFGVAAAIDYVNVAGLLPLNGTFELVGPLDDAFDRATCLEASILLRDASIVGVVGPNGSPSAVTSHLIFKKYHIPQCSMASSPALSDVREFPFFFRAALSNAFVSPMLVDLCVQMGWRKVGVLSTNDDYGRSLASGFQKAVSEHGGITAILTESASRDSNGVMDFSSQLGVLKRENIRIIFLLTYNPESYLALKTADTLGMIGPHYVWISEQSKSLVTDQLPQIAPPSELTAATALFAGMLFYTPAVGQGPLYDTFLRYFARRKAWYLNGTTPHLPIVTEEPPPLSTVDPTYLPIAPRAVNEFDCVLTFAHAISDSYATLVEAGVDITSLSANLSTLTTMPRDLPGGSSITVGGSGSSGSPGAAVGADDSDAVPADFTFGDLLMNKVRATSFVGASGPIAYDGNGDPFPRYVLWNLVYGRNVQVGDYSGSTGLAITSRFVYNGGSTTNPGDGQTSDGMPAGTIVGIVFGSIGGLLLLGVLFLAGRATRRAKQRAREQVALRKAEEERRREALAQTQIATAGDRMKSVFLANMSHEIRSPLNSILGISELLEEDMTRPAERESLAMIRRSGESLLLILNDILDFSRLEADMMDVKTEPFDPMGVVEDVVSLHAEIGFRKGIETSFHVCCGCAACANTTHTKATSSDSVCMPESLMAVGDSSRFTQVLSNLVSNAVKFTDSGHVTVCVRAARRVPEGQCSLAADDSATWPSHVVERTSTDTPSHQSGAVGMGDRFLLIEVHDSGIGLPADEMPRLFLRFQQGDNSMSKRYQGTGLGLAISASLIQLMGGKIGVRSSQGRGSIFWCTLPLSQGRCGPDAGAGAGGRMPVGAPEGTVALLSGDPIYLASARTCCMLLGVMCTPSADASLATAPLLRSSNPPALASGSSYGIQTVEGSILADWDWFVGTGYGDARTMRPPGGSPSHLSWFKAPPRGTGPIHAFRKPITRAKVMVALTGQAPDYASASVLNFDGTSQQFDATQTPSESDGMSFAAESIASAIEALAASAKTAASPNGTSPSMALKVLIADDNTINQKVALRMVCSMGYAGVTVDNGARAVDAYLAAPGTFGIILMDLQMPVMDGLDAARQIRSAEAERGLSRVPIFALSASTASDVSAACAAYGMDGFVEKPFQRAQLERTVRSACAPRT* # PASA_UPDATE: g12580.t1, single gene model update, valid-1, status:[pasa:asmbl_2661,status:12],[pasa:asmbl_2665,status:12],[pasa:asmbl_2666,status:12],[pasa:asmbl_2667,status:12],[pasa:asmbl_2668,status:12], valid-1 NODE_17_length_65977_cov_44.7711 . gene 24229 31746 . + . ID=g12580;Name=g12580.t1 NODE_17_length_65977_cov_44.7711 . mRNA 24229 31746 . + . ID=g12580.t1;Parent=g12580;Name=g12580.t1 NODE_17_length_65977_cov_44.7711 . five_prime_UTR 24229 24458 . + . ID=g12580.t1.utr5p1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 24229 27143 . + . ID=g12580.t1.exon1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 24459 27143 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 27446 27676 . + . ID=g12580.t1.exon2;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 27446 27676 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 27949 28167 . + . ID=g12580.t1.exon3;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 27949 28167 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 28603 28884 . + . ID=g12580.t1.exon4;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 28603 28884 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 29120 29416 . + . ID=g12580.t1.exon5;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 29120 29416 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 29655 29837 . + . ID=g12580.t1.exon6;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 29655 29837 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 29973 30176 . + . ID=g12580.t1.exon7;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 29973 30176 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . exon 30430 31746 . + . ID=g12580.t1.exon8;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . CDS 30430 30900 . + 0 ID=cds.g12580.t1;Parent=g12580.t1 NODE_17_length_65977_cov_44.7711 . three_prime_UTR 30901 31746 . + . ID=g12580.t1.utr3p1;Parent=g12580.t1 #PROT g12580.t1 g12580 MPASSHPVFSGASDGAGGVGMIGSGGSNGGGGISTGVGLGQYAHVPMGHHPQPPYDSMIHLQSQSQSHQRISEESEYDGHFNGDDMSGGPYGPGGADAHYAMKLDHSWNADQEVRRILTEAFEGSAPSGPNELEITPSGELVSEPPSVCDSPALWPPPGSAASGMGMGMGMGMGMGMGMGGAQGGYLSQQQHQLSHHQQQQQQHAIGFASAAAARRSKLRKPPPLSRGTSYSPTSDPARARRALKGNRTPRHETRSNVPQVTEQLWKAQTFGPDALVGSAETSGDDDDDEDAMREAHDGVRANGAAGGRGQSPDAVRGVRSHVGGVAGGQYGQFGDGERSIVGSLIWGASSNAGGGMMNGWASHYEMGGGADVGGGGAGVGRMHAMDAAVAPGNGAVDSFFMRSLPLEDDQVVPGMHSKLQQQQQHQQQQQQQHHLQQQQQQQQQQQQQHTSVRASEVSGSGQLLQGHPLLQHARSGSGGQGQFGGGASSWGDVRSSTTSSIWGNDAYVGGLPSMVGGVRAGQNDAAVRGSAPAKNIWAASESPAQMQAPSASGQHNGAPQQRGMSAAWFIPAGPTLTQPSQQHMHHQQHIQTQQLQQQQQQQQQQQQQQQQQQQQQRPLGPNAPLDYHFQRMAIGPQQQRLGGGGIGQPHMYAPKGSAGQQQHPGHQASYGRGDAIAHKQQQQQQQQQQTAVAAAHGQAPGQAHGQAHAHVAMTMGMTMGMGMGMGMGMGARGALPAQPSAGGDRAGVHVAHERDGSFEGGAYGMYGDHSAGPRASQAQQHAPASAQPGVGRGDRGTASVRPKQKPAPLSLGSAPANASGAGAIGGGYGPPRGGGGGGNGGAGGGMGGMGMGGDYFEGGGDSDQEDSQAGLDDDSIGVNGRLRDVLKVFKQKELDSFESAVVYATQSLDGLSDRARWRLCLEIADLAKRENRIRVARGFYYMAGSLNPRAVQGWLEWAKMEEECGEMVTCQRVLEVGLSHCPGNDGIMIKAVKQAERVGDLAGARAILGRLSSMDPDRTWRVMLEGALFEARAGNVEVAREVFKYLMSTVYWYGPIYYEAFRFEEKCEEYDRALAIIKAGLREIPRYGPLWFGALRLGERLGCASGVCDLSDVHATVSRAVNAISKELVWRVWFEAAQAEERADNLDRSRACYALAALHSPANLRWRVWVAGARTELVAGNSQAARELLQRALTEVPLKNRAAVLLDCARLEEYLGNVERAREILAKARRETKHEWKVFLESLLLEVRAGNLHAATEQAERALAVHSGTGRLWAMLIQLKQSEGEQIQLEMFHAALREVPKSGEVWCEGARIKLNPLSPSFDPAAARRFLDFAIQFTPQYGDSFIEAMRLQLLECGPDVDTARLEQLCVNADPNYGTLWFHCKPHPLDGARQTLRNARQVLQREMYDHRAVYQRAILRLLSPPSPECKASSVEAALSVASGNANINANAVVVAPPPAIVVAGPAPLPVADPTRSDGECYRPSDFACGLMELCRIAPPDPDAAGSRRAAEQRMREIFGSDSIP* # ORIGINAL: g12589.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 59521 62414 . + . ID=g12589;Name=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 59521 62414 . + . ID=g12589.t1;Parent=g12589;Name=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 59521 59884 . + . ID=g12589.t1.exon1;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 59521 59884 . + 0 ID=cds.g12589.t1;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 60220 60736 . + . ID=g12589.t1.exon2;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 60220 60736 . + 2 ID=cds.g12589.t1;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 60905 61107 . + . ID=g12589.t1.exon3;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 60905 61107 . + 1 ID=cds.g12589.t1;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 61327 62414 . + . ID=g12589.t1.exon4;Parent=g12589.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 61327 62414 . + 2 ID=cds.g12589.t1;Parent=g12589.t1 #PROT g12589.t1 g12589 MSHRDRTPPRRDRDERDSRPSSGDRREDGRGSVDRERERGRRSPPPGPGAGTPFEEFSRVMMMNLPERAEKFEIRKAFERHGIVREMILRGHFGFVQFATAEEAQRAVAEENGRMAGNYKMALKTTRNRQFASAQDRFPHPPANARFNGSADSFPPQQRRLSRSPPPRDRHDARDRHDSRDNARDKYESSQGRERHDESFERPRGGAGSYDDGGDARFKRDRERPEREREREREREREKDRDGRDGRDGRDGRDRERGRDDYEDRRPVKRPSLSGSRPRTTTDARVIVINKQQGPYAEMISQRLVGEGRISSEVVVLIETSLPEAINAAQQDRIAYACIVLSQHEKQGTVSLRLLRKEPVQEINNVPIDEAVQIIRREQEHAMYPPPPPQMHAMPPMAPMQSMPSGGPMHAAPIQAHGPPGVNPYDAHGYPPAIHPGHPGHQGGQGQMQQPPPIDPYLRPSQPQPQLAQHQPQSQPQSQQQAPYAPMMHANMVPSPAHGMPMGMGMTPPSHPHPHSHPHPHPHSHQAPMQMMGGVPMGMPAPTIDAQKQAEIQKLLDLLMNKPTAMPGQPAQPSQIPQPPTPQMNLQYGQQGQPQPQHPQHPQHPQLQPQQQHSHLQGQMSMGQMGQMGQMSQGHAPYAPAASQAPQMMHAPMQGQHAPLPQQQQQRHPGQQPQQQQQQQQQQQQQQQPDLSGNPNLQKALNDFLRASPNLLGLGMGSHQHPQ* # ORIGINAL: g12572.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 224 1234 . - . ID=g12572;Name=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 224 1234 . - . ID=g12572.t1;Parent=g12572;Name=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 1124 1234 . - . ID=g12572.t1.exon1;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 1124 1234 . - 0 ID=cds.g12572.t1;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 906 1010 . - . ID=g12572.t1.exon2;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 906 1010 . - 0 ID=cds.g12572.t1;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 577 708 . - . ID=g12572.t1.exon3;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 577 708 . - 0 ID=cds.g12572.t1;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 224 376 . - . ID=g12572.t1.exon4;Parent=g12572.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 224 376 . - 0 ID=cds.g12572.t1;Parent=g12572.t1 #PROT g12572.t1 g12572 MAATGRLPRTPRLWASVARCVRMAPLRMAIGARHCQSSATAPRSAVAYDHRTLEAKWQRKWIECPPPDLDLLPASMPKFYALSMFPYPSGSLHMGHVRVYAISDCTARVHRMRGYKVLHPMGWDAFGLPAENAAIERGIPTKEWTVKNIGHMRTQLNALGLSFDWHR # ORIGINAL: g12579.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 20841 23240 . - . ID=g12579;Name=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 20841 23240 . - . ID=g12579.t1;Parent=g12579;Name=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 23199 23240 . - . ID=g12579.t1.exon1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 23199 23240 . - 0 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 22656 23065 . - . ID=g12579.t1.exon2;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 22656 23065 . - 0 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 22289 22490 . - . ID=g12579.t1.exon3;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 22289 22490 . - 1 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 22043 22164 . - . ID=g12579.t1.exon4;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 22043 22164 . - 0 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 21558 21690 . - . ID=g12579.t1.exon5;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 21558 21690 . - 1 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 21253 21329 . - . ID=g12579.t1.exon6;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 21253 21329 . - 0 ID=cds.g12579.t1;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 20841 21078 . - . ID=g12579.t1.exon7;Parent=g12579.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 20841 21078 . - 1 ID=cds.g12579.t1;Parent=g12579.t1 #PROT g12579.t1 g12579 MLPRVSLAAAAAGRPLRVSVPAIASLRRCYVGLAFNSTQDKDKASATATSSAPVIDPAAATDVQTVATTSKASDIISSVSAGINAAARWIRRPAIPDPEFSVISSGLGAMVHVKMPEGSRVYTAVGSVVGMANRVESSISTEGGPLRALARLLAGGNFVLNRLSATAQPGDVLLAPKALGDVAAIQLDGSTDYFLRRNAFLACSPHLALTAQPTPLAHIRDSGLFTLRVTGKGTLAITTYGGLFRLVLEDGEEYIVSRRHLVAWDTAMTPRAIIGEQVKPGNVLQRALSRFGLTVKHTLLRDQDLVRLSGPGDFYVSSRIEPRFEGLKSLGRSSGDGYLTVPSPAVSNAQAPKTSDTPNQPSSRDDYAAGVAKIEAIVLPPQPDRKAPTVTSYADVKAQLEKQKGGA* # ORIGINAL: g12584.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 43719 46546 . - . ID=g12584;Name=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 43719 46546 . - . ID=g12584.t1;Parent=g12584;Name=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 46284 46546 . - . ID=g12584.t1.exon1;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 46284 46546 . - 0 ID=cds.g12584.t1;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 45574 46067 . - . ID=g12584.t1.exon2;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 45574 46067 . - 1 ID=cds.g12584.t1;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 44880 45079 . - . ID=g12584.t1.exon3;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 44880 45079 . - 2 ID=cds.g12584.t1;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 44088 44282 . - . ID=g12584.t1.exon4;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 44088 44282 . - 0 ID=cds.g12584.t1;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 43719 43955 . - . ID=g12584.t1.exon5;Parent=g12584.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 43719 43955 . - 0 ID=cds.g12584.t1;Parent=g12584.t1 #PROT g12584.t1 g12584 MQSVENVGRCRSGFNLLAPETVVHHIVPYLLNVDVSSLAKVNRALHAHLRQKRLYHLWPLHNRKYIEDATFRKEVKATIPVGRLVLDGVPVIELTDVELDSLEFVNVKRVKLVSYAWPGGVGITDISGLRNARFVTLERMEHLVDVSPLANAIEVTIEPCDKVSWVSLLTLGGVKKLFYRPSPSRYNSSPYSAPNVIPIEFANLHTLEMTNTIVVDITQLGMIHTLTLFNLDEVKIRNDFLEKLGSVHTLSLYVSALGHVHTLLLVICRNVLDVSGLGNVFHLDLSHCYLVKDFSPVATVNVSVLVAGPLQVDLSVLSGGSPTASSDAVDCAESLFCVTLSICNEAISSADTTCPVAAPLRGGWRERLFEAAGVSEQARRKVLQSSSTHVWFVGKAVGSGGLAFVVKDGRCKHHFELLSRFAGNPAFGRLRGWVHDARNKYRYALVCLTGWMQSRRHSSLRR* # ORIGINAL: g12590.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 63739 65977 . + . ID=g12590;Name=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 63739 65977 . + . ID=g12590.t1;Parent=g12590;Name=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 63739 63838 . + . ID=g12590.t1.exon1;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 63739 63838 . + 0 ID=cds.g12590.t1;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 64121 64852 . + . ID=g12590.t1.exon2;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 64121 64852 . + 2 ID=cds.g12590.t1;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 65275 65431 . + . ID=g12590.t1.exon3;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 65275 65431 . + 2 ID=cds.g12590.t1;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 65663 65977 . + . ID=g12590.t1.exon4;Parent=g12590.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 65663 65977 . + 1 ID=cds.g12590.t1;Parent=g12590.t1 #PROT g12590.t1 g12590 MATSRIQTKRQSFALVLAALALIISTPGWGAFAESTTDAVNLVEWSQDITEWKNVYVAWATENGCPLPSTDWLSELSGTDPSALPWSTIQSKFKEALGTWKAQAAAAGPACVVNCPSPDDPGNLSGVCEWDGLVRYGGRVPVAVGNTGCETTWMVPPAASSAQYGVCGCASPSDPHGNPDTRVTCSWMNGGVPNGQQYSIPTNCKTGIVAPSTATRSTVASDLVCSCPSLLDPAYSYSVCTFPSRYAPPNMLVAHTSDCFFQTNQAPDTATGTLVCPSASTLPANFFPTILSIPGSSWTSGGWAFTTPAEQAAYAVISQSLTSLGSTDIRARYISYGLAQSEASTWIADLSIEQGAIQAELAKNPTGSECDQTCYNFVSHAILLVEFNALTTLVQWEAVLLEYVRGTIDTINANIDVVALTIWGDANPAVSATD # ORIGINAL: g12575.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 9312 11763 . - . ID=g12575;Name=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 9312 11763 . - . ID=g12575.t1;Parent=g12575;Name=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 11578 11763 . - . ID=g12575.t1.exon1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 11578 11763 . - 0 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 11196 11249 . - . ID=g12575.t1.exon2;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 11196 11249 . - 0 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 10979 11074 . - . ID=g12575.t1.exon3;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 10979 11074 . - 0 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 10513 10517 . - . ID=g12575.t1.exon4;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 10513 10517 . - 0 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 10208 10348 . - . ID=g12575.t1.exon5;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 10208 10348 . - 1 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 9986 10043 . - . ID=g12575.t1.exon6;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 9986 10043 . - 1 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 9625 9776 . - . ID=g12575.t1.exon7;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 9625 9776 . - 0 ID=cds.g12575.t1;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 9312 9447 . - . ID=g12575.t1.exon8;Parent=g12575.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 9312 9447 . - 1 ID=cds.g12575.t1;Parent=g12575.t1 #PROT g12575.t1 g12575 MVEVGGDSGGLPVVDFSDFLSGNPVARRCIAQRVFGACSEWGFFYLKGHGMPSDVVAEVFAQSRAFFNRSDEDKSSCAWSADNRGYVRYGREKLSPGDARGDAKECFNVGVEVTCFALSIGLEDSFFTPLHDAQRPSGSILRLLRYPPVSDALDSPQRAGSHTDYGSITLLFQDNAGGLQVRRGDAWIDAVPMDGAIIVNTGDLMEHWSGGRLRSTEHRVCATTTSAHKDRYSVAYFCHPSDDTVVATLPCAIEGFVAPPVTARQHLLDKLSGTY* # ORIGINAL: g12587.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 56343 57346 . - . ID=g12587;Name=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 56343 57346 . - . ID=g12587.t1;Parent=g12587;Name=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 56876 57346 . - . ID=g12587.t1.exon1;Parent=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 56876 57346 . - 0 ID=cds.g12587.t1;Parent=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 56588 56728 . - . ID=g12587.t1.exon2;Parent=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 56588 56728 . - 0 ID=cds.g12587.t1;Parent=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 56343 56453 . - . ID=g12587.t1.exon3;Parent=g12587.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 56343 56453 . - 0 ID=cds.g12587.t1;Parent=g12587.t1 #PROT g12587.t1 g12587 MAITIQSSSAANRKGEGRHRRKSFFRHNEVSQKITSASTNTVEDGDPAPKCIKYIPRKSAADALSFPDIHDDTEGVPAFASLANQFPSGASTLVDIGGGRFDQCTHWVLANTGIEMRVMDPFQRSAEHNRSVQDWIEFSGGVDIATSMSVLNVIPDLANRLEHICVLHSILKRGGVAFFKVWAGMWPLRGSGIAEMDTTNNTYQANCWASSFYEEVRAVFGAENVCVNNDRNCIVAMKPE* # ORIGINAL: g12582.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 33843 37188 . - . ID=g12582;Name=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 33843 37188 . - . ID=g12582.t1;Parent=g12582;Name=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 37067 37188 . - . ID=g12582.t1.exon1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 37067 37188 . - 0 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 36564 36832 . - . ID=g12582.t1.exon2;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 36564 36832 . - 1 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 35964 36077 . - . ID=g12582.t1.exon3;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 35964 36077 . - 2 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 35650 35784 . - . ID=g12582.t1.exon4;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 35650 35784 . - 2 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 35325 35425 . - . ID=g12582.t1.exon5;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 35325 35425 . - 2 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 35029 35200 . - . ID=g12582.t1.exon6;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 35029 35200 . - 0 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 34511 34868 . - . ID=g12582.t1.exon7;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 34511 34868 . - 2 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 34008 34230 . - . ID=g12582.t1.exon8;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 34008 34230 . - 1 ID=cds.g12582.t1;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 33843 33884 . - . ID=g12582.t1.exon9;Parent=g12582.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 33843 33884 . - 0 ID=cds.g12582.t1;Parent=g12582.t1 #PROT g12582.t1 g12582 MLVLFETPAGYALFKVLDEGKLKDTDNLFKEFQTPEAASKVVKLKAFSKFEDTTEALAAATALIEGKLDKNLKSFLKKSVVDSDLKDKLAVSDAKLGGVIKEKLEIKCLHDSAIMELFRGIRGQINALITGLPESEMNAMALGLSHSLSRYKLKFSPDKVDTMIVQAISLLDDIDKELNTYAMRVREWYGWHFPELGRIVADNIAYAKVVKKMGIRSKAASTDLSEALLEEVEAEVKEAAQISMGTEISEEDVINITYLCDQVIELSEYRGQLYDYLKNRMNAIAPNLTLMVGELVGARLISHAGSLLNLAKHPASTVQILGAEKALFRALKTKHETPKYGLIYHASLVGQAAPKFKGKISRVLAAKTSLSARVDALGEKANLEIGIENKAKVEARLRQLEGRTVHKAANTPKSATKDKYQNVSEVKAYNAAADSTLGKATPAKRKAEEPAEGEKSAKKEKKEEKKEEKKEEKKEEKKDKKDKKDKKKRDDSDDEDEKQESKKAKKDKKKK* # ORIGINAL: g12581.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 32137 33034 . - . ID=g12581;Name=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 32137 33034 . - . ID=g12581.t1;Parent=g12581;Name=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 32770 33034 . - . ID=g12581.t1.exon1;Parent=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 32770 33034 . - 0 ID=cds.g12581.t1;Parent=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 32507 32607 . - . ID=g12581.t1.exon2;Parent=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 32507 32607 . - 2 ID=cds.g12581.t1;Parent=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 32137 32292 . - . ID=g12581.t1.exon3;Parent=g12581.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 32137 32292 . - 0 ID=cds.g12581.t1;Parent=g12581.t1 #PROT g12581.t1 g12581 MSKQLVKQALGTLLADSGRRASQKKDASGTVAEFSLDEMAVPRARATPTTLAAALKQHTARGGVGKLKRRLNTQRATAAAASIRRAEMDSLQKDAVDEDHTKDNLRVLLRTFKRSNTDAVGKILKRTAKRQSRTKGERDDIRREAHRTAGQASRPPSKAAAVGGSAGNDDDSD* # ORIGINAL: g12583.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 38185 43638 . + . ID=g12583;Name=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 38185 43638 . + . ID=g12583.t1;Parent=g12583;Name=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 38185 42735 . + . ID=g12583.t1.exon1;Parent=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 38185 42735 . + 0 ID=cds.g12583.t1;Parent=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 42935 43338 . + . ID=g12583.t1.exon2;Parent=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 42935 43338 . + 0 ID=cds.g12583.t1;Parent=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 43536 43638 . + . ID=g12583.t1.exon3;Parent=g12583.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 43536 43638 . + 1 ID=cds.g12583.t1;Parent=g12583.t1 #PROT g12583.t1 g12583 MGDRGLDPIDAPVDAPSDGNGEGAGVHDSDMNTGTELPIHMSMEDGNFPQPLNDHSMSEDNTTTPPDNAAGSVTADDASHSAPQSNALVLYRPAVASALASSSSSSASYRRLYEACTAGNARAVEALLVAGVDASVRPHAGCNPSLLAAASSGSRACVVLLLSYGARVNDANAQGMTALMLAASQGYAECVSVLLDAGADPNMETPTALSALCYAINGSFPDIVRLLISRGADPRSPVAMRLAVTAGSELVGLLLMSGASASASFRQITPVHVAALGGDATCLHMLATAGADLFAASTAGDTALHCAAEATSPECVRFLLDASVPASVRNTRGLTPLLNCAYRSARPASLECARLLLDHGADPCAVDKDGASALHLAAEGGGVDMLRLLLAAGANPQCVTDDDTAAHHLAAWHGHVDFLAVLLGIPAPLAADGADDGPLLNVDARADSGWTPLHLAAYTGHVGCARLLVDRGADVMATTAFGTSAALLAGRHAKAPAYHQMYAQWASRGLCAKVSAEWAPALRDSFPKHLAAAAANGLVCRGYPDIDVCPIEVSLATQCARAFAAVLDAAADTASPPDVAPCGGVCVGVRGCVCGAIDRMQAALSRAAMELTGAAWMDAHVTAAFGLAPRPAPALSNRVMVEAALELLLPCVLIRGTALRVVEECIADVASARGAPPMARSAVPLVLLRLRSLASALLACVDGVELASLCSAEMQTLPPEPTLPALLPESTASMPRQGAWDALADDLNAARGVFGAMGRGAQSASIASGGVRGSDDAGAPDEHDGAVLDVLDMSDADEAEGSPLSVLDVLDELDARVEVGSGWGDGNGAISSINDVEGAYGQFGLGGGGEGDDDTEGDDDDTGDDDDDTEGDEGDDDDTGDDDDDSGSRSDGEAHDRPPPGLYSPVRPPFYVDTESLKCTDSSNSSNSINNSGGVYQDGVMCHAVLRRSVAHNGGVLSQMVTDAIATFSLSRAPALPVRIEAHALRFRHARTAWASFAASLLALGAADALALSAEALRVMAADMASVPVVGRRLVRIDIDRSNIVASALTAVGKRLQSLCAEAAERSIGFGVGLAMAHTAHASGTGVSAAPLAFSVGADARSVGMSDTSPHGIGVPASGLALADEVDEEHAGSTSRGWEDGDGDDSDFEDDFDADAGADGPGRVRWHKHGDLRVGLDVSFAGEIAHGVGVTREFFAEVTRLLIEGECEWAQGAGGCGGVDHVGGCGLFEGFNGRTVFNIASTAPLFRDSSIDNSIDRSMDDSDVDNAGIQRRQSSTFTMDACADGSVAMRLRLLGSLLAVGLCQGATAGALLSTSTCLSLLLGPTRWSLPAEVTCSCGCIRGAPGRAADLPAVLCDGVICTSSHCACALLLELSRLDADVARSLRTLALDASAADFGDGGAYADLRFAISLPSARSADDVFALVQRGGNLSVTMDNRMEFVRRYAHARVRGMAAASGHMWAFAEGFYAVLTHGALVLAFGGQPEKLQAALCGSVGAIDVDDWQRNTQYDGCDPNTKQVAWFWRCVHDMTDDARKRLLRFVTGLSAVPSLGFSGLRGPHGVKNFTIALGPEAVRPDTPAGDRGVPISPGESLNTTCDSTVTYVTAEMELDDTMEGEVVLGDDGPLAQREGFFPPTDVSGGGNVPLAHPTARTCFNTLVLPAYSHEADLRRLLVSAVDSRHTGFDFV* # ORIGINAL: g12578.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 18987 20532 . + . ID=g12578;Name=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 18987 20532 . + . ID=g12578.t1;Parent=g12578;Name=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 18987 19338 . + . ID=g12578.t1.exon1;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 18987 19338 . + 0 ID=cds.g12578.t1;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 19751 19849 . + . ID=g12578.t1.exon2;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 19751 19849 . + 2 ID=cds.g12578.t1;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 20038 20159 . + . ID=g12578.t1.exon3;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 20038 20159 . + 2 ID=cds.g12578.t1;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 20452 20532 . + . ID=g12578.t1.exon4;Parent=g12578.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 20452 20532 . + 0 ID=cds.g12578.t1;Parent=g12578.t1 #PROT g12578.t1 g12578 MKVGSVPFVCSGATLVAILAAAALVANTGGHIGASASSSSSLTQIGDAGDGVAGEGGEGGGRVRMRVRVPAMDDKPDVPMADKELTITGEPCLWRAAEEQARQRRDAHAGSEIFSVCGAPSDHLHWRHVKVDPEAPQKGNNVTIEAHAVLAYNIEAIHINHLKLPPMPHALVIAKMVAPDEVVSSGYVHVEGHYQGTIRAMDQNENQITCVAFDVTL* # ORIGINAL: g12586.t1 original gene structure, not modified by PASA NODE_17_length_65977_cov_44.7711 AUGUSTUS gene 53671 55713 . - . ID=g12586;Name=g12586.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS mRNA 53671 55713 . - . ID=g12586.t1;Parent=g12586;Name=g12586.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS exon 53671 55713 . - . ID=g12586.t1.exon1;Parent=g12586.t1 NODE_17_length_65977_cov_44.7711 AUGUSTUS CDS 53671 55713 . - 0 ID=cds.g12586.t1;Parent=g12586.t1 #PROT g12586.t1 g12586 MYSHRMQSSAFHEGELAVQAAVGTVELARDTSEMIAPFVPDGAIGFITGREFVVVTSVIATTGFVWSSVLWGSPGFITVTSPTVIRVSASVALADPLRESLTSNNASDTKPVGLLFIDLRTRRRFRINGDVSAVRLPPAKSTTLNAGDSTLISFDIRIREAFPNCPKYIQRRAPVMTSTKDRDAQSHTASLTGAQQRGLSAQQQAFVSNADTLFLSTFHAGSRRADASHRGGRRGFVRVLGPTAIAFPDYVGNGMFQSLGNVAVCPRAAISIVGWAEGNVLQMTGTAAIHHGNADSSGSESDTDGENTERWVSFSIDGVVEHIGSAPFAYSYIDSSPYNPPVAAEPTACEWVASLRGHAVRGQPHDVSGVVLMDANADADSENAARHVLLRVKRVIQETPHVRTFVFEAADPKHPSAVPRLWRPGQYGTFTVTQPGGTSVVRTWTIASAPPQQSTDEMRTIAITMKLKEGGLVSSQAHHTDAWGVGSTPLAMTGIGGEFSLFDMDETAGALRIGSVNCEGRGTALLPLPNGREGVLFIGGGAGMTPFLSMARALAPMHGTGLDVVVVQAASTPDDIIAGRELLAIARKSGTPMRTHSVVSRARSPTQPKPGYQPSPHGMSGSCEYTLGRLDAVRLLNLVPDVALRHVFLCGPPTFMSAMNEALKSLGVPAAHIDSENFAY* # ORIGINAL: g12073.t1 original gene structure, not modified by PASA NODE_1186_length_13294_cov_40.0875 AUGUSTUS gene 6180 8334 . - . ID=g12073;Name=g12073.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS mRNA 6180 8334 . - . ID=g12073.t1;Parent=g12073;Name=g12073.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 7872 8334 . - . ID=g12073.t1.exon1;Parent=g12073.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 7872 8334 . - 0 ID=cds.g12073.t1;Parent=g12073.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 6180 7603 . - . ID=g12073.t1.exon2;Parent=g12073.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 6180 7603 . - 2 ID=cds.g12073.t1;Parent=g12073.t1 #PROT g12073.t1 g12073 MDTSQQQRAVRRIQNTLGHLHPVDGALAPNTCAGKADDPRNAVTTGDKAARAFPTRRQDVLKWNGWGYADSKFQLNSNGQVELTGTRYSLGGQELPHLREWMEHVCDVRLDQRSESGPPPTVPEPIRNEGFIREISGELKLISFDSQDRLFRSHGHTCYEIFALRNGVVGRVPDVVVWPTSHAQVEVLMAAATRHNVCVIPFGGGTSVSRAVECPANEKRMIVSLDTTEMCNILWIDKESLMARVEAGIIGQDLERRLAAEGLCSGHEPDSMEFSSLGGWISTRASGMKKNVYGNIEDIVVRVRMVTPTGTIEKNCQVPRMSIGPDVNHFVMGSEGILGVVTEATIKVRPLPKVRRYGSAVFPDFESGVAAMREVALRRCAPASIRLVDNQQFQFSHALKPHPSSSIQSLIDAAKKFYVTKIKGFKPDELCAMTLLFEGETEEEVAAQQKRIYDIATRHAGLPAGEENGKRGYFLTFVIAYLRDIGFDHNFIAESFETSVPWSHTLQLCRNVKAVIRDSCARRGIAKPFVSCRVTQTYDTGSCVYFYFGFVYTGLSDPIGIYHEIEEEARAEVLANAGSASHHHGIGKLRMQYVTDTLSEGGVEMLRAVKERIDPKNIMGAQNLIPPK* # ORIGINAL: g12074.t1 original gene structure, not modified by PASA NODE_1186_length_13294_cov_40.0875 AUGUSTUS gene 8774 10588 . + . ID=g12074;Name=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS mRNA 8774 10588 . + . ID=g12074.t1;Parent=g12074;Name=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 8774 9113 . + . ID=g12074.t1.exon1;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 8774 9113 . + 0 ID=cds.g12074.t1;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 9238 9350 . + . ID=g12074.t1.exon2;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 9238 9350 . + 2 ID=cds.g12074.t1;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 9884 10013 . + . ID=g12074.t1.exon3;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 9884 10013 . + 0 ID=cds.g12074.t1;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS exon 10575 10588 . + . ID=g12074.t1.exon4;Parent=g12074.t1 NODE_1186_length_13294_cov_40.0875 AUGUSTUS CDS 10575 10588 . + 2 ID=cds.g12074.t1;Parent=g12074.t1 #PROT g12074.t1 g12074 MGKATKTRKFAAVKRVISPKDGRVTKTKEEEAKKKKAAEGTVQAVRQLPQYSSALFFRYNTQLGPPYRVLLDTNFINFSIQNKLEIMKAMMDCLFAKCIPCITDCVMAELEKLGPKYRVALRIAKDPRFERLPCMHKGTYADDCLVQRVTQHKCYIVATCDRELKRRIRKVPGVPIMFISQRKFTIERMPDAGAAVKA* # PASA_UPDATE: g12072.t1, single gene model update, valid-1, status:[pasa:asmbl_690,status:3], valid-1 NODE_1186_length_13294_cov_40.0875 . gene 89 5680 . + . ID=g12072;Name=g12072.t1 NODE_1186_length_13294_cov_40.0875 . mRNA 89 5680 . + . ID=g12072.t1;Parent=g12072;Name=g12072.t1 NODE_1186_length_13294_cov_40.0875 . five_prime_UTR 89 159 . + . ID=g12072.t1.utr5p1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 89 249 . + . ID=g12072.t1.exon1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 160 249 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 525 581 . + . ID=g12072.t1.exon2;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 525 581 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 856 3209 . + . ID=g12072.t1.exon3;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 856 3209 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 3551 3713 . + . ID=g12072.t1.exon4;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 3551 3713 . + 1 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 3954 4055 . + . ID=g12072.t1.exon5;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 3954 4055 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 4143 5186 . + . ID=g12072.t1.exon6;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 4143 5186 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . exon 5365 5680 . + . ID=g12072.t1.exon7;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . CDS 5365 5619 . + 0 ID=cds.g12072.t1;Parent=g12072.t1 NODE_1186_length_13294_cov_40.0875 . three_prime_UTR 5620 5680 . + . ID=g12072.t1.utr3p1;Parent=g12072.t1 #PROT g12072.t1 g12072 MLEATTVALSADPRMRKKFQRRQAVRKEGRNLANDGSALAHARDDLSHRPRLFPSGNGSRFENRLRTLQELCGTGYVLAGRALHSVLLHFRRPNHVLLAEREEGPLWPAASLLTIGKAPIINFADAILRADADGGLAAMAATRTVGVSLAPLLNGHAWDGSSRGLLNLLRAECEGHLELQRRVEGYYSPPPPLLRAVDASALAIYPLERRVRDRMRLQEDAVAFAFGEPSGDAWIRVRAAGYGVVSGDGLPQRSLFEYLSQQQQQKQSDDQRASEETSGKDGTVREMRAVSLTMVTQQKTPLWQPPTRGPLRRSEPTTPESSQSVASSAYASPGESDSEESLYLDAEGPREHSVASHGNSRTHTPSQPDRSISSHGTFESAVAKPRSVGRGGALDDKDAMSATDDPSIALDPTSLILGTAFDREAVDGAGAPPPNTNNSSNTSNSNNRHTRNTADETESTQTPAGASTPTLPAHMYAGGLARSPSSQRGLRSVSLPQPPASGISGHIPPRPGVVASSMKRPASLGRRNDSLLGTISRLSHLPASSLDCLDDLVCAVFPLESATLQWSLGWTGQGASRMFGTQESPSMHSHLSTSMGGGGVPDPSAPMYPRGKGHVAKQVRNDPNPMLSTSFSSRQMHPHESHMQGHVHAPSPPTPSRPILADGGSLGMEDESLSPFAAVHTDTRRTEAHAQQPHHTHQNPHHHQQQQQQQQQQQQQQQEHLQQQPHQIYGHSYAHSRTHYHSHAYGGGILGSAASIGDADMHDRECGGQCHRGHVFAPVCAAVNRAFKTQSGAEVKTGQGLLHFRARYSFAKQAAFAVLTGRPLIVHATAANEDAVRSIVNALAVFVPGHLRSVEVMPWRTRPLSLADLANMRVIGLLKTGQIPKAIERFAAILDFEADSLLAPAYTGTYLDSLLTKPKQWRDDESFLAHVHSVLFELASKAMILFSMHYCPSSALGSHPTPHAATVAAELAAAIGSGSGAASSPRHEPFGTDNVSLSSQSWTNQRTTQATDARKTSISTSTEEAAYLHYYGGGFYPGGNGAPFSASASAALARQLFVRQPSITSVSASVQTAYGTQSVTQQAPPPSGNQPQQDAQQQQQQQPGLPSPSQSQLSSSSTASTPNAGSRVMPGVTTAPPQPRGSGFSGFSLPFSFQSLANFAFGGGSAGAATATPTVASSPPASTVAANYTGKGGMGAATHGGLSASTSVSSSREQSIETSTPSVAAASSSVVGGGGGSSSSPPVTRRPRMQTEHHGPLELEVNPGDIEIIEHFIDVIARQHYAEFIHGLRAIGLEYDECNPDGHPGGNRQHNHSESLCGVRPPIPPVVRFDMRRNMLFRNGQPTPVGRKTSKPLP* # PASA_UPDATE: g12075.t1, single gene model update, valid-1, status:[pasa:asmbl_691,status:12], valid-1 NODE_1186_length_13294_cov_40.0875 . gene 10784 12741 . - . ID=g12075;Name=g12075.t1 NODE_1186_length_13294_cov_40.0875 . mRNA 10784 12741 . - . ID=g12075.t1;Parent=g12075;Name=g12075.t1 NODE_1186_length_13294_cov_40.0875 . exon 12549 12741 . - . ID=g12075.t1.exon1;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . CDS 12549 12741 . - 0 ID=cds.g12075.t1;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . exon 12240 12371 . - . ID=g12075.t1.exon2;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . CDS 12240 12371 . - 2 ID=cds.g12075.t1;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . exon 10784 12006 . - . ID=g12075.t1.exon3;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . CDS 11285 12006 . - 2 ID=cds.g12075.t1;Parent=g12075.t1 NODE_1186_length_13294_cov_40.0875 . three_prime_UTR 10784 11284 . - . ID=g12075.t1.utr3p1;Parent=g12075.t1 #PROT g12075.t1 g12075 MALGGVRLSIGADKRHFIFGYGSLMSSDSRKRTGTTGVAWPARLIDFQRGWGYRGGYMTAVAIKECFGSTVNGVLVEVDYKDLPQFDIRESGYKRVKVQREKLIVMDSEHDLPEEEDAELWVYAVDEFQWASTERPIVQSYIDVIVTGAMEWGREFAEEFVATTAGWTAVFDMDVESCSGHGTHKTPMARLCAPCDKSNDDVSFGYDNNNNNNNNHNEDDEDYEARDAQSGVGDGDAAAGEQAPSSPLDTDVDVGEELYGQRRKLISNTFARCYSTGIPSGSIPENAVGNSREGRMSPCIWVDDRHLKTPLYVRYLTDAATTEIDSILRHALGVTLRRLSVDDEDASQ* # PASA_UPDATE: g5529.t1, single gene model update, valid-1, status:[pasa:asmbl_5069,status:12], valid-1 NODE_2815_length_5070_cov_42.0923 . gene 735 2847 . - . ID=g5529;Name=g5529.t1 NODE_2815_length_5070_cov_42.0923 . mRNA 735 2847 . - . ID=g5529.t1;Parent=g5529;Name=g5529.t1 NODE_2815_length_5070_cov_42.0923 . exon 2633 2847 . - . ID=g5529.t1.exon1;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . CDS 2633 2847 . - 0 ID=cds.g5529.t1;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . exon 2318 2462 . - . ID=g5529.t1.exon2;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . CDS 2318 2462 . - 1 ID=cds.g5529.t1;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . exon 735 2101 . - . ID=g5529.t1.exon3;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . CDS 986 2101 . - 0 ID=cds.g5529.t1;Parent=g5529.t1 NODE_2815_length_5070_cov_42.0923 . three_prime_UTR 735 985 . - . ID=g5529.t1.utr3p1;Parent=g5529.t1 #PROT g5529.t1 g5529 MQLFTRSVPSRHAPSSWAFVVWGLSLLAAIAVLGKLSSVARNPFPEWKAAFDAGYKTVFDGRTHTIEDPDGSALDALIRSDFSVEGITALLDVVPSCAWRFVSDGTTFNVALPDRNSIYQVMLLYLGEGDAIEFSGEFPQVRYFSYQTYELKTFSPLGSVRDYEIPAATHANPYAQPVAQIESGSYVIHVVPQTTGEFATELAALLPNQTHGLAAVFLRLYAVDPSVPSDSLLRAWGGVAPPTVRVRRGKEGKWTRLAQCHQRHRGVVIPDNPHVNASCPYGTNSNDNAFLPNTKNLKYQFASYDANYLLACATRTLDGKKVVARVSALLPSTPTGLYTADRNVSSFQSYDVRYVSVSPVSLSTGHQVFFTYGDVAIANHYASTVGSTAWEAMGRPFTIWIAEDNATATAAGADLSRDMFAPWPLNTFVGVLYRQVLSNDKREGRTVGGDSVAAIYDTCVATQPRYTNCYAPEECNHVMGDKYPSIAYYFV* # ORIGINAL: g5530.t1 original gene structure, not modified by PASA NODE_2815_length_5070_cov_42.0923 AUGUSTUS gene 3302 4672 . + . ID=g5530;Name=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS mRNA 3302 4672 . + . ID=g5530.t1;Parent=g5530;Name=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS exon 3302 3622 . + . ID=g5530.t1.exon1;Parent=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS CDS 3302 3622 . + 0 ID=cds.g5530.t1;Parent=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS exon 3976 4173 . + . ID=g5530.t1.exon2;Parent=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS CDS 3976 4173 . + 0 ID=cds.g5530.t1;Parent=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS exon 4531 4672 . + . ID=g5530.t1.exon3;Parent=g5530.t1 NODE_2815_length_5070_cov_42.0923 AUGUSTUS CDS 4531 4672 . + 0 ID=cds.g5530.t1;Parent=g5530.t1 #PROT g5530.t1 g5530 MINVFFAWAFDSPIKAVALIAITITFPILWIPVLLMLTIAFLHGPTATLPKSVKGVGQVFEQRMRDWIGSLRRPGTWKAPTPEIKKLRTRDGVEITYYVMRPVGDSESVHGDHTHDKHRSSTGDKSHRKVALMCCPLGGCGFKIFTPLIHYLRNDYTFVTWDYRGLFSSGQPKRPRRISIPEHAEDAKQILDAEGISVVDLTIGHSMGVQVSLELAALYP # ORIGINAL: g2015.t1 original gene structure, not modified by PASA NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS gene 1630 3990 . - . ID=g2015;Name=g2015.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS mRNA 1630 3990 . - . ID=g2015.t1;Parent=g2015;Name=g2015.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS exon 1630 3990 . - . ID=g2015.t1.exon1;Parent=g2015.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS CDS 1630 3990 . - 0 ID=cds.g2015.t1;Parent=g2015.t1 #PROT g2015.t1 g2015 MHELWSLLAEIKAPPSRNPEELPDQAAYFSKQRAFVRRELDEMLDGEKKNKRNVEWDHSVILTDSEMEVSRTEQAPDRTITSSPDTDAVYQLLLLEGREGVFFLPIRKIFDDPDCNQYKFVVLNASTLAEQGNGTRHELMSPRRQDRQQPPVRAKGIGNIQSYAYRWEAIKRAPECIHPELLAFFTGCTSPKHASNITEAMGRMGLDDANGRLSGAQPGTSGGRHAWPPPRRDDDAAEPSRHLNKSQQAAISNLQGRIAAIHGPPGTGKSTTICAIVESRFMADPTTGRVLICATTNKAIDALAEKMHKRDLGAVLLAVGNESRLEQLTQQFLWEHKVEKDPTVRCAIEALACQTELSACLIDLLSADESTKLVLAAPTAGRQLPDAATRLQDASQRARKVTERLGGVIDRAKSLPPAASISAFKDPRFASLPTTYLRETETGVRLSMTHYAEARTVCSLLHQQINTETEKLRARRRVWVSSRIIICTASSAVLLEERLSRAFSDTTSGDDNGRTEADVRTVILDEAGAMHDVDALGTLLHGAQRLLLVGDHQQLRPIALADSPKGEISALERLVTSNLLQAHLLDEQYRMPPDQCRLISSIFYEGKLHTSESKAKIHRSEGVTMKFSNVNGRERGRYINDQEVAAVVKHVVAIMASKQHDETVCVMTFYLEQRRDIDRALKVAGFRVAGVANDATGNKPKHRLHAPHVPLSQSVLVATVDSMQGREADHIILSCVRTGQKLGFIREPNRINVALSRARQSLTVVGSREALMRDSTWRRVCSAIQP* # ORIGINAL: g2014.t1 original gene structure, not modified by PASA NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS gene 93 1244 . + . ID=g2014;Name=g2014.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS mRNA 93 1244 . + . ID=g2014.t1;Parent=g2014;Name=g2014.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS exon 93 1244 . + . ID=g2014.t1.exon1;Parent=g2014.t1 NODE_2690_length_5441_cov_41.4702_potentialcontaminant AUGUSTUS CDS 93 1244 . + 0 ID=cds.g2014.t1;Parent=g2014.t1 #PROT g2014.t1 g2014 MTRVSSRQVGLTVLIVSLGVLNRILYKAMLVPMRDHSYVISQFVTFGYVFVYFAILSARRWLGIVTPQMLSVPKTRFILIGAFEALGYYLGVLSASRIPGTLLPILSQTMLPATMAFSSYFLKTRYTTRQIIGAALVIAGAVVTVMGQTHQTSGSTTTTTAATTSTTTTAATITATLEHVLGGVSLPSVVAAVVYAISGAVGSLAFVTKEMAFRDSHRPDVFVVNSFGSLFQCLWIFALMPLQAALSAVMATESTPTHPTTLVSSDALDRLAAGSQCLAGHTPGVCADTMPWLALAYVAVNLCWNIAILFLVRSAGAALSFVAITVSLPLTYIAFCLPLPLLSPTVASFESVFGLVFVLAGLVLFHQSESPQSSGGGAQDRAT* # PASA_UPDATE: g11113.t1, single gene model update, valid-1, status:[pasa:asmbl_5782,status:12],[pasa:asmbl_5783,status:12], valid-1 NODE_3251_length_3914_cov_37.2334 . gene 95 3641 . - . ID=g11113;Name=g11113.t1 NODE_3251_length_3914_cov_37.2334 . mRNA 95 3641 . - . ID=g11113.t1;Parent=g11113;Name=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 3516 3641 . - . ID=g11113.t1.exon1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 3516 3641 . - 0 ID=cds.g11113.t1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 2642 3327 . - . ID=g11113.t1.exon2;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 2642 3327 . - 0 ID=cds.g11113.t1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 1230 2184 . - . ID=g11113.t1.exon3;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 1230 2184 . - 1 ID=cds.g11113.t1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 866 1006 . - . ID=g11113.t1.exon4;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 866 1006 . - 0 ID=cds.g11113.t1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 290 637 . - . ID=g11113.t1.exon5;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 290 637 . - 0 ID=cds.g11113.t1;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . exon 95 161 . - . ID=g11113.t1.exon6;Parent=g11113.t1 NODE_3251_length_3914_cov_37.2334 . CDS 95 161 . - 0 ID=cds.g11113.t1;Parent=g11113.t1;3_prime_partial=true #PROT g11113.t1 g11113 MQVPERKKPLPKMTMATLKSMNLQRSEENLTKMNYSDRDIQEMQTEWSNMTGFLCALAGVCLQMSGGRNRSTSVAATSSPFTDMKSFKETMSRGNNASSPLRNCNKFVSDLLNLLVCGNVSLGTFVRETVREMVGVEMTPALYPILFAQLHATLESFFGEGGQVQPNDSATLFVDQAISIVKHLLEKRQESSAENLALADIETLMQTFVRYVRTLAVSSASMRIRTKLCQLTETMMLRRDLLSFRQEMKFRCRLVDSLMEWMRGFVADSTSRPQGGTDDIPEKLYRDLDMACMKAIVALLSGLPLQVETDGTDADPMEAKQVLFLKYFTFFTNIMNTCRDEYAKIAENSSGVQSGPGGGSTHTREGSLGVPAMLSEGAVMSRQMSQTGSGLGISALARESVSSGSASAPPTPTATSSGSLWGLNTSQVFGAKVDEHLKQHLSQLRESTILAMSNLLNANIDTGLTHSISMGYHDDPKTRTAFMEVLTNILRQGTEFDTLGETALGDRYEKLLALLLEDDFAVAMALCNAVPHAEAEDLVRVLARVFATKGKLAPLIRCLVVDEVTVSESMETLFRRNSAASKMLSHVFKVYGTEYLRTTVEPLVSEMCLSSNSFEIDPDRTKPDEKLETNLKNLTEVTTRFLNAFLGGRDRFPRFLRTVLTELGDAVCDRFADARLKGVGSAVFLRFLNPAIVSPESFGMLPPGFNLTPAVRRGLTLISKVLQNLANEVRFSKERYMLGFNDFLEQNTAGSQEFFRSVSTAVPEGPDDLSSDPL # PASA_UPDATE: g6484.t1, single gene model update, valid-1, status:[pasa:asmbl_4799,status:12], valid-1 NODE_2685_length_5451_cov_40.8782 . gene 4565 5309 . - . ID=g6484;Name=g6484.t1 NODE_2685_length_5451_cov_40.8782 . mRNA 4565 5309 . - . ID=g6484.t1;Parent=g6484;Name=g6484.t1 NODE_2685_length_5451_cov_40.8782 . five_prime_UTR 5309 5309 . - . ID=g6484.t1.utr5p1;Parent=g6484.t1 NODE_2685_length_5451_cov_40.8782 . exon 4565 5309 . - . ID=g6484.t1.exon1;Parent=g6484.t1 NODE_2685_length_5451_cov_40.8782 . CDS 4826 5308 . - 0 ID=cds.g6484.t1;Parent=g6484.t1;5_prime_partial=true NODE_2685_length_5451_cov_40.8782 . three_prime_UTR 4565 4825 . - . ID=g6484.t1.utr3p1;Parent=g6484.t1 #PROT g6484.t1 g6484 SKPEGDGHGVVTEGTSTEPDDAVLTAPGITAASGAGHRTAPERHDSLNLASLGTELLDLTSAFKQTEVDAIVALRVPSGLLSPIAPVHASTAHTVHASVSGEGENASMTASVTQFEDIRLEDVYEHPNESGVVGHVQRDGLLPSTNSTQDIDDEYFYKYD* # ORIGINAL: g6483.t1 original gene structure, not modified by PASA NODE_2685_length_5451_cov_40.8782 AUGUSTUS gene 207 2765 . - . ID=g6483;Name=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS mRNA 207 2765 . - . ID=g6483.t1;Parent=g6483;Name=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS exon 2687 2765 . - . ID=g6483.t1.exon1;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS CDS 2687 2765 . - 0 ID=cds.g6483.t1;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS exon 1478 2403 . - . ID=g6483.t1.exon2;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS CDS 1478 2403 . - 2 ID=cds.g6483.t1;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS exon 1088 1346 . - . ID=g6483.t1.exon3;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS CDS 1088 1346 . - 0 ID=cds.g6483.t1;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS exon 469 828 . - . ID=g6483.t1.exon4;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS CDS 469 828 . - 2 ID=cds.g6483.t1;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS exon 207 345 . - . ID=g6483.t1.exon5;Parent=g6483.t1 NODE_2685_length_5451_cov_40.8782 AUGUSTUS CDS 207 345 . - 2 ID=cds.g6483.t1;Parent=g6483.t1 #PROT g6483.t1 g6483 MAVQVCMFILLVSSITAVNGGFAKLDGFELFGLTSVTDTYRLDAGAAASIPADPRPVLASSKDGAFVVSATLWGQTLRLAFMPAALGYTPRVAEYNTLQNVAWFDVAVTTTGTVVIAISGDSTFGVHRLPRAYFERTPDGPVETAPLITSTRLFATDKFAIALLHNEKKLIIAGCVGNSAVHMIAHDFGNSFASVYNNSQPRDLKCGFRPSVLCDVSPQNATLGVCGAFFAVGNSVIVATTSHDGASTDMLLGQLNAPDTSQAMYGTVCRVVDEMAPYPGVSVLATFMNGTSAPPTATAFHFTVDADAIAARAATLLPIALPPEFDPNQDLIVPPSHLTCIRVGAQYVFAVFAPTGVSYSVSTTPSSISWTLLSAASSGVDVPDTYMSPSLSLAPPPLGGSAEDFVVAWSRYIGFPAIHLPAACNSDNKPGGSSPNGCRIIVGDLDVTGLPPLNVTSVWGNVFGSVSPSDTLVFPSASIGGALKLSAVSSISYGSITEIRGGGYIRFTQPTDGSCSNATALKRLIPSWRSMSIIRDQSVGCDAIFPKPLYRELIALSPPWYFNGFDNGALRLVDVANSSAWLADSVF # ORIGINAL: g3838.t1 original gene structure, not modified by PASA NODE_2112_length_7672_cov_49.2215 AUGUSTUS gene 3371 7586 . + . ID=g3838;Name=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS mRNA 3371 7586 . + . ID=g3838.t1;Parent=g3838;Name=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 3371 3678 . + . ID=g3838.t1.exon1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 3371 3678 . + 0 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 3867 4041 . + . ID=g3838.t1.exon2;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 3867 4041 . + 1 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 4301 4540 . + . ID=g3838.t1.exon3;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 4301 4540 . + 0 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 4828 5031 . + . ID=g3838.t1.exon4;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 4828 5031 . + 0 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 5233 5423 . + . ID=g3838.t1.exon5;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 5233 5423 . + 0 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 5693 6476 . + . ID=g3838.t1.exon6;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 5693 6476 . + 1 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 6608 6686 . + . ID=g3838.t1.exon7;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 6608 6686 . + 0 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 6923 7117 . + . ID=g3838.t1.exon8;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 6923 7117 . + 2 ID=cds.g3838.t1;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 7570 7586 . + . ID=g3838.t1.exon9;Parent=g3838.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 7570 7586 . + 2 ID=cds.g3838.t1;Parent=g3838.t1 #PROT g3838.t1 g3838 MAEARSAVTGAITVPSFELSVSGEGLLLRIDKNAFRSLLRHSKRSFRRKIRELRNWLINFVYPANPLHWAATVGGIAALMLVDNKRTEKVASLLWSVESKIPWVSRLTKVQQATLFSVATGTGIVVGQAVTRKFLLRGLLSYKGWLYEQPGKQNLFVAVWAGFVRILSGRHPLLYSNQQTLPRLPVPSLKSTVRKYLSTVRPLLSDDEYAQVAKKGEDFLRNEGPKLQRYLALKSWIAANYVTDWWEKYCYLMGRSPIMINSNYYVIDSDKFIPTPVPVARAANIITQMLKFKKMLDRETLEPMFIRNTVPMCMSQYQRMFSTTRLPGHELDTVEHYSEDESQHIVVLRNGAFYRLECFRPDGSALTTLEFESQIKWIVDDADRNGATTAEASIPALTAENRTTWAEARLSHFSAGVNRDSLCAIDTAMFVLVMDEEESGDLTEMGRRLIHGNGRNRWFDKSFTLVVFANGKCGLNVEHSWADAPVMGHMFEWSMCMEVRTGYAKNGFNKRPATPIPTVPLPVPRRLRWSLSGETEETIRSAYENAQKLIADFDLNILSHYNYGKGFVKKCRVSPDAWVQMALQLAYRRDANKFALTYESSMTRLFRDGRTETVRPVSSDSVAFINAMLDDKVAKKEKIRLLQLAAETHQSYYRDAMSGKGIDRHLFGLYIVSKGTGVDSDFLKEALSQPWRLSTSQQPQQQTNLWNLNDPKDLERVSPGGGFGPVADDG* # ORIGINAL: g3837.t1 original gene structure, not modified by PASA NODE_2112_length_7672_cov_49.2215 AUGUSTUS gene 101 2671 . - . ID=g3837;Name=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS mRNA 101 2671 . - . ID=g3837.t1;Parent=g3837;Name=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 2564 2671 . - . ID=g3837.t1.exon1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 2564 2671 . - 0 ID=cds.g3837.t1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 2377 2424 . - . ID=g3837.t1.exon2;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 2377 2424 . - 0 ID=cds.g3837.t1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 2119 2197 . - . ID=g3837.t1.exon3;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 2119 2197 . - 0 ID=cds.g3837.t1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 1729 1877 . - . ID=g3837.t1.exon4;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 1729 1877 . - 2 ID=cds.g3837.t1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 871 1484 . - . ID=g3837.t1.exon5;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 871 1484 . - 0 ID=cds.g3837.t1;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS exon 101 458 . - . ID=g3837.t1.exon6;Parent=g3837.t1 NODE_2112_length_7672_cov_49.2215 AUGUSTUS CDS 101 458 . - 1 ID=cds.g3837.t1;Parent=g3837.t1 #PROT g3837.t1 g3837 MRRFPVRGKGPAAQRDGSTLQLKKKVKAAKPPPQWDSTISNLDDLKLSKKNLAERKKLYKSPNIEIAREELRRKAGYYDASDVDTSHNRSSSPGLNGVEDKVMSFARSTEAVRALHEILGTGDKRDAEVDRPPARIRVATTVTRAPRPQDHSDEAMTAADLMTSAMQQTAKTPSGPPMRTIDRSHAVAPSPGMPMLPNTPAPPITPRNLLRKAPSASLDVDNGKTPANNFRIISRAASSQPTAGGRASGSFESLVDVDGSESPSEHTNEHSPGPLDRFRKALAESVGSATSASSPLGGSVSARDGPAVRVISPLGSRVQARLFDALFPLVVVGFASILAEAAQSSPPVAPRPASASADSHTTPATCLANKDGAHPQVHLTAPGAPHTICDFASPGGVSVASFGGSSGVPSPSRAYADLVRLSNVVRSLEDDVALYETQTGRSAPSAITNGIV # PASA_UPDATE: g2035.t1, single gene model update, valid-1, status:[pasa:asmbl_4351,status:3], valid-1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . gene 2091 3062 . + . ID=g2035;Name=g2035.t1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . mRNA 2091 3062 . + . ID=g2035.t1;Parent=g2035;Name=g2035.t1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . five_prime_UTR 2091 2170 . + . ID=g2035.t1.utr5p1;Parent=g2035.t1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . exon 2091 3062 . + . ID=g2035.t1.exon1;Parent=g2035.t1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . CDS 2171 2908 . + 0 ID=cds.g2035.t1;Parent=g2035.t1 NODE_2456_length_6201_cov_27.5457_potentialcontaminant . three_prime_UTR 2909 3062 . + . ID=g2035.t1.utr3p1;Parent=g2035.t1 #PROT g2035.t1 g2035 MVVEDVPNEVLIRMDQIVNSADNLCQSCGRCNMAKKAAFQSFIQNDGESLKESVDMTFRCQTFPERMLEVAQRTPQDSTVELSRVTKVASDSLDVLWKQLQNCAHELSLQSMDEFPDDFHQLCQGLIVGSSVDDITNHFMAFVHRGIGSGKHTYAEPLSTGSSEPSDVSDGFSSVGSSDASEGRGRNLSDVSDGFSSVDRAPSFMGSCGSSDVSEGRDRKSSDVSNGSSSLGRSLRALEVVGLLT* # PASA_UPDATE: g2775.t1, single gene model update, valid-1, status:[pasa:asmbl_7136,status:12], valid-1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . gene 1006 1945 . - . ID=g2775;Name=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . mRNA 1006 1945 . - . ID=g2775.t1;Parent=g2775;Name=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . five_prime_UTR 1945 1945 . - . ID=g2775.t1.utr5p1;Parent=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . exon 1864 1945 . - . ID=g2775.t1.exon1;Parent=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . CDS 1864 1944 . - 0 ID=cds.g2775.t1;Parent=g2775.t1;5_prime_partial=true NODE_4243_length_1945_cov_41.3166_potentialcontaminant . exon 1006 1569 . - . ID=g2775.t1.exon2;Parent=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . CDS 1279 1569 . - 0 ID=cds.g2775.t1;Parent=g2775.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant . three_prime_UTR 1006 1278 . - . ID=g2775.t1.utr3p1;Parent=g2775.t1 #PROT g2775.t1 g2775 NDFWNFAGLTEADGGHPFTTSHYGYYMVEWFIPFALTGQVTNLPKSSLTFSPKPAVPYRLPVLLPNVLGILDASTASGMLGGVSYSLCLTVGSLHVSHLAVDGAVYPGEARLQAGSCVFWSSS* # ORIGINAL: g2774.t1 original gene structure, not modified by PASA NODE_4243_length_1945_cov_41.3166_potentialcontaminant AUGUSTUS gene 17 673 . + . ID=g2774;Name=g2774.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant AUGUSTUS mRNA 17 673 . + . ID=g2774.t1;Parent=g2774;Name=g2774.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant AUGUSTUS exon 17 673 . + . ID=g2774.t1.exon1;Parent=g2774.t1 NODE_4243_length_1945_cov_41.3166_potentialcontaminant AUGUSTUS CDS 17 673 . + 0 ID=cds.g2774.t1;Parent=g2774.t1 #PROT g2774.t1 g2774 MLDMWAKNVGMRRARGEYLLNFIPDSLWNERIFEAFALQRLREDRMYLAYLLHSSTDIPEPTRRGGPEAIIDWMQSTTVAGDKESYGGNLFDRAKHGRNRMASVYLYWAAGDFSLAHRSAVETKLRGHWETCYVRHVDSMYAWQARRKGMWYTYMDGFLYHQYHTQMKHLYFEVPAVITRAADKTSRCAGFVVPQLFRLLDTNGDWGFRNVVFQEEVC* # ORIGINAL: g9911.t1 original gene structure, not modified by PASA NODE_405_length_24491_cov_56.0072 AUGUSTUS gene 17003 19434 . + . ID=g9911;Name=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS mRNA 17003 19434 . + . ID=g9911.t1;Parent=g9911;Name=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 17003 17247 . + . ID=g9911.t1.exon1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 17003 17247 . + 0 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 17346 17431 . + . ID=g9911.t1.exon2;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 17346 17431 . + 1 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 17507 17928 . + . ID=g9911.t1.exon3;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 17507 17928 . + 2 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 18124 18249 . + . ID=g9911.t1.exon4;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 18124 18249 . + 0 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 18352 18464 . + . ID=g9911.t1.exon5;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 18352 18464 . + 0 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 18592 18745 . + . ID=g9911.t1.exon6;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 18592 18745 . + 1 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 18862 18924 . + . ID=g9911.t1.exon7;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 18862 18924 . + 0 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 19059 19152 . + . ID=g9911.t1.exon8;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 19059 19152 . + 0 ID=cds.g9911.t1;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 19382 19434 . + . ID=g9911.t1.exon9;Parent=g9911.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 19382 19434 . + 2 ID=cds.g9911.t1;Parent=g9911.t1 #PROT g9911.t1 g9911 MKEKGSGDATPAAHHGSESHTAKGHKSAILHRSDPLARAWHGKAESLLSSSSGFNNYRGFVNLALLILVLSNFRLAVENIIKYGFLVNPLSWFSWWLDDPYHWPSLTLLATLNVYIIVAYGIERLSASRLLSESFIVLLHSLNIAMEILVPVMVILKYHPNPVGSSFVLAQASILFMKLISYAMTNKWWRLKTAKKTDGESVTPGLVQYPDNLTLSNIYYFAFAPTLCYELNFPRTDRIRKRFLIKHLSQAAFFGALIFALGEQWIVPTVRNSMRPLQESEYSVMLERLLKLAIPNHFLWLMFFYAFFHCMLNVIAELLRFADREFYKDWWNATTIKYFWQNWNIPVHRWCTRHVYMPLLRSGFGIFTAQLVVFAISAIFHELLVSVPLGMFKVWSFAAMMGQLPLVILTEHPAIKSSQFGNLIVWLSLVLGQPVAILAYVHDYLLLHDKL* # ORIGINAL: g9908.t1 original gene structure, not modified by PASA NODE_405_length_24491_cov_56.0072 AUGUSTUS gene 5296 7074 . + . ID=g9908;Name=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS mRNA 5296 7074 . + . ID=g9908.t1;Parent=g9908;Name=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 5296 5628 . + . ID=g9908.t1.exon1;Parent=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 5296 5628 . + 0 ID=cds.g9908.t1;Parent=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 5822 6361 . + . ID=g9908.t1.exon2;Parent=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 5822 6361 . + 0 ID=cds.g9908.t1;Parent=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS exon 6496 7074 . + . ID=g9908.t1.exon3;Parent=g9908.t1 NODE_405_length_24491_cov_56.0072 AUGUSTUS CDS 6496 7074 . + 0 ID=cds.g9908.t1;Parent=g9908.t1 #PROT g9908.t1 g9908 MCAKLRSSAHARFASMFIASLMVVSVGFGMASAVTVSVSVQSFQFVPPSVTINVGDTVTWTWAAGGHNVAQMNSATSCTTSAGGFLTAISASGTKFSQKFTTAGTFNYACQPHCSAGMRGSVVVNAPPAQPTTTAPVAGPSSNSVQSFSALPSPILSSNALGQSSQPPPSLSSQAPLSSAPPLSSLPPLSSQAPLSSQPQPPPSSQPAMETSGTAIAVTVQSDRFVPATITVNVGDTVTWTWSVDGQNLAQIVNATSCVFVSGGFKSGARVAGATFSQTFQSTGIFSYASVNNCTTGMRGKVVVVLPPSQSSTPPPVGQSSDILQVSSAPPSPTIETPPPPVSSLPPAPGVFVVTVESFQFTPAVITINVGTTVKWVWLAGGHNVAQVISATSCTTTNGGFATDLLLAGNDFNLTFTAPGTFDYVCQVGDVAVCNPILSDSLRTNLGMHGSVTMHSHFMYEYSRNLTRCSSLVTNLDSPGGLK* # PASA_UPDATE: g9909.t1, single gene model update, valid-1, status:[pasa:asmbl_6912,status:12], valid-1 NODE_405_length_24491_cov_56.0072 . gene 7262 9369 . - . ID=g9909;Name=g9909.t1 NODE_405_length_24491_cov_56.0072 . mRNA 7262 9369 . - . ID=g9909.t1;Parent=g9909;Name=g9909.t1 NODE_405_length_24491_cov_56.0072 . five_prime_UTR 9005 9369 . - . ID=g9909.t1.utr5p1;Parent=g9909.t1 NODE_405_length_24491_cov_56.0072 . exon 7262 9369 . - . ID=g9909.t1.exon1;Parent=g9909.t1 NODE_405_length_24491_cov_56.0072 . CDS 7262 9004 . - 0 ID=cds.g9909.t1;Parent=g9909.t1 #PROT g9909.t1 g9909 MPTHQPQSLQPSMLTLTLQPQLLQPSTPMLTLQPQLLQPSTPTLMLQPQSLQPVTPTLTLQXXXVAALDADADAPTAVVAARDADADAPTAVVAARDADADAPTAVVAALDPDADAPTAVVAALDADADAPTAVVAVREADADAPTAVVAARDADADAAAAVVAALDPDADAPTAVVAALDADADAAAAVVAALDPDADAPTAVVAARDADADAPTAVVAAREADADAPTAVVAARDADADAPTAVVAALDADADAPTAVVAALDADANAPTAVVAALDADADAPTAVVAARDADADATAALVAAFEEVTAGGRLDDVGGVAFEDADVGRLEETAGGAELTTAFEDDAGGGALEDAGGGGLEEAAGGAELTTAFEDDAGGGALEDAGGEGLEEAAGGAELITAFEDDAGARGLEEAAGETELPTAFEDDAGGGELEEIAGGAELPTAFEDDAGGGGLEEAGGGAELTTAFEDDASVGGLEEAGGGAELTTAFEDDAGGGGLEEAAGGAELTNAFEDDAGGGALEDAGGGGLEDAEGRAELSTTFEDNADGGGLVGEGAIVGVVVFVGPVTTIRPRMPRPQ* # PASA_UPDATE: g9912.t1, single gene model update, valid-1, status:[pasa:asmbl_6909,status:12], valid-1 NODE_405_length_24491_cov_56.0072 . gene 20017 24255 . - . ID=g9912;Name=g9912.t1 NODE_405_length_24491_cov_56.0072 . mRNA 20017 24255 . - . ID=g9912.t1;Parent=g9912;Name=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 23418 24255 . - . ID=g9912.t1.exon1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 23418 24255 . - 0 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 23172 23253 . - . ID=g9912.t1.exon2;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 23172 23253 . - 2 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 21210 23008 . - . ID=g9912.t1.exon3;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 21210 23008 . - 1 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 20366 20918 . - . ID=g9912.t1.exon4;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 20366 20918 . - 2 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 20180 20269 . - . ID=g9912.t1.exon5;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 20180 20269 . - 1 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . exon 20017 20085 . - . ID=g9912.t1.exon6;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . CDS 20034 20085 . - 1 ID=cds.g9912.t1;Parent=g9912.t1 NODE_405_length_24491_cov_56.0072 . three_prime_UTR 20017 20033 . - . ID=g9912.t1.utr3p1;Parent=g9912.t1 #PROT g9912.t1 g9912 MSYTLLRWLGCSGYELSQRPTESVDDFEKRLEENIRAFDGELARLRGQVSSLQDPSKLGSGSAKIAGDITLLADALGGLFNGAKENIAAVRTHESDILVLFGKSEEARRLIERSGDPKHVRLLKTRRLDPGSDSMRARLFSRLSEITRAAQALDAELETRFEDRCRRESASTLQEPPSERLYHTLASHHAAATRQSLQVDRLAASLNRLNIGGGKSGSPAAPTGRQQVEKSRDSDPHSARLSAPSDRQFDILRNSLFKRSPCIRKFRSMGAVPAGVDQHVSGKDSTTANALVDKPTSRPPLAAQTIGEAPMKAFGHVTMPTPSAGKRSMSPNFSASQLPSPAPAPAKPSVPASAVSVLPTQPAQTIAADARFGFGTSADNSSPSPAASGKPAPSNSLSAFSLGSSSQTESGQRNGTTAAPISFGAISAVSSGQAAPPTVNPVKGDALASFAGKKDPSTLPSFQMGGGNPVAPASAFVAKVSAPLPIFGANLSMAPATQADVTPPPSKGTETPVAVGDKGVSGFSFGSIGTAMAPSSVSNSPQPGKDGMNSPATPATPVSFSFGATKDGTAPSAPASRFGTFALGAPAGSDAPGTTAFSFGAPPKTASAPAPTTVVAPSIKPAESAPSTTFGIGSFAFKTDGAGTPSATAPVSALSANMFASADVRKPVAATTEQPSAALLGIGSGTSSTVMPVRFGAYGKDRDPGADKSIVSGAKFETEMHATAAPDSVLVGAAKALTFGSSSASPSASPTAAPTASAPTAAAPTAFAAASTAAAPTPFAAAPTAAASDPTAATLPDATGTRATNGFGTVNNTKTSTPFGSVATAPAAASKPFAGGIGSLGSASVWTAPAGTAAVSTSKAISQPASDNSDAMEATDMSSVGSALGAFGGLGKPSSVSTPSVLGSAAAFGGGFGSMGGASARPAVSGFGALAGAATPASSTPAQSLTSAGGFGSQPSFGNASTFGTAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFGAAAPAFVNAPSSGFGASGFGGAPAFGATPGFGNPSSFGGTTATSSFGGAATFGSTGASAGGFAGQSGTGGSGFAAFATKQTGFGNFSATSPPSGSSGGFSAAPSFTQRRM* # PASA_UPDATE: g9910.t1, single gene model update, valid-1, status:[pasa:asmbl_6911,status:3], valid-1 NODE_405_length_24491_cov_56.0072 . gene 11438 14770 . + . ID=g9910;Name=g9910.t1 NODE_405_length_24491_cov_56.0072 . mRNA 11438 14770 . + . ID=g9910.t1;Parent=g9910;Name=g9910.t1 NODE_405_length_24491_cov_56.0072 . five_prime_UTR 11438 11537 . + . ID=g9910.t1.utr5p1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 11438 11670 . + . ID=g9910.t1.exon1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 11538 11670 . + 0 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 12133 12197 . + . ID=g9910.t1.exon2;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 12133 12197 . + 2 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 12386 12754 . + . ID=g9910.t1.exon3;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 12386 12754 . + 0 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 12957 13125 . + . ID=g9910.t1.exon4;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 12957 13125 . + 0 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 13271 13332 . + . ID=g9910.t1.exon5;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 13271 13332 . + 2 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 13510 13565 . + . ID=g9910.t1.exon6;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 13510 13565 . + 0 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 13723 13975 . + . ID=g9910.t1.exon7;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 13723 13975 . + 1 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 14186 14300 . + . ID=g9910.t1.exon8;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 14186 14300 . + 0 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . exon 14527 14770 . + . ID=g9910.t1.exon9;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . CDS 14527 14741 . + 2 ID=cds.g9910.t1;Parent=g9910.t1 NODE_405_length_24491_cov_56.0072 . three_prime_UTR 14742 14770 . + . ID=g9910.t1.utr3p1;Parent=g9910.t1 #PROT g9910.t1 g9910 MISGGAKHLATCIQRRALPALRMSLSACLFQRPFSGGAQASMAQGRTPLRPQSTVTLEDILLAKIKLNGPVSVSDYMREALTNPLHGYYMHRDVFGQKGDFTTSPEISQVFGEVGIMCVDVRSFSEYVILSTPTPTTCCGGGICVCVYVAPQLIGAWNVAHWHQLGSPSAVKIVEFGPGRGTLAADMLRVMEQFGMATAAELHLVEASPHLRKIQSESLGCSGCDSHTPAGVKVSWHDTFATVPRGDPLFIMAHEFFDAMPVHQFEKTEDGWRERFISADINPNRTRALNFVRAEGTTLASLAFVPRALGTADQQTTRATGATGDVLEFAPASWTLMESIGAAIHQSGGVALVIDYGADGTTGSGDTLRGYADHKQVHPLDNPGRIDITADVNFLHLKRSLVPLDGKVKSYGPIRQGDFLLSLGLEARVNQLLRVCKNSEMAKSIIDGCRKLVDPNDMGARFKVFAVAPSSATPPPAF* # PASA_UPDATE: g9906.t1, single gene model update, valid-1, status:[pasa:asmbl_6908,status:12], valid-1 NODE_405_length_24491_cov_56.0072 . gene 219 794 . - . ID=g9906;Name=g9906.t1 NODE_405_length_24491_cov_56.0072 . mRNA 219 794 . - . ID=g9906.t1;Parent=g9906;Name=g9906.t1 NODE_405_length_24491_cov_56.0072 . five_prime_UTR 718 794 . - . ID=g9906.t1.utr5p1;Parent=g9906.t1 NODE_405_length_24491_cov_56.0072 . exon 641 794 . - . ID=g9906.t1.exon1;Parent=g9906.t1 NODE_405_length_24491_cov_56.0072 . CDS 641 717 . - 0 ID=cds.g9906.t1;Parent=g9906.t1 NODE_405_length_24491_cov_56.0072 . exon 219 419 . - . ID=g9906.t1.exon2;Parent=g9906.t1 NODE_405_length_24491_cov_56.0072 . CDS 219 419 . - 1 ID=cds.g9906.t1;Parent=g9906.t1;3_prime_partial=true #PROT g9906.t1 g9906 MLNRRSSVLDNVGALTAPSSTPPKDGFHLHRTSRSNSTATGSPIIAPPSADKFEGSPITLKNDLISELSVDVLYHIGFTTELDLPAMFGDVK # PASA_UPDATE: g9907.t1, single gene model update, valid-1, status:[pasa:asmbl_6910,status:12], valid-1 NODE_405_length_24491_cov_56.0072 . gene 1283 4456 . + . ID=g9907;Name=g9907.t1 NODE_405_length_24491_cov_56.0072 . mRNA 1283 4456 . + . ID=g9907.t1;Parent=g9907;Name=g9907.t1 NODE_405_length_24491_cov_56.0072 . five_prime_UTR 1283 1307 . + . ID=g9907.t1.utr5p1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . exon 1283 1951 . + . ID=g9907.t1.exon1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . CDS 1308 1951 . + 0 ID=cds.g9907.t1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . exon 2465 2638 . + . ID=g9907.t1.exon2;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . CDS 2465 2638 . + 1 ID=cds.g9907.t1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . exon 2896 3112 . + . ID=g9907.t1.exon3;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . CDS 2896 3112 . + 1 ID=cds.g9907.t1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . exon 3389 3559 . + . ID=g9907.t1.exon4;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . CDS 3389 3559 . + 0 ID=cds.g9907.t1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . exon 4234 4456 . + . ID=g9907.t1.exon5;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . CDS 4234 4341 . + 0 ID=cds.g9907.t1;Parent=g9907.t1 NODE_405_length_24491_cov_56.0072 . three_prime_UTR 4342 4456 . + . ID=g9907.t1.utr3p1;Parent=g9907.t1 #PROT g9907.t1 g9907 MADLLTRAALLLCVCTVLCHYAIATDTASDAAIDVGQDTSQSNAGASVDKVDAGADKVDAYASTDEVDAGASADEVDAVKPEKAKVEKRLRSTTLDDRIRGCILGSLAADTIALVTHFEYDAGRIHSEIRALDLPMKPRFAQNDGSLIHKGKDAGQHTEVGDNILMLLDYLSENEEFSLSLYLQYWLGVMEDYEGHKTFFTNFVVGRIRAGYTHEEALIDAEDGAAAVRFSPLVAGIRSEDVLVRAARKTVLLTTRNEDVLATAEFLARAVFRIVHARETPVRAMVGAAKTSNSEFVKHCVRKGFQMAKDVDAQPASERDKYTDGTAIVAMGRELEEPVEGRDQQIGKSTVVGGVLPAAVYLVARHHRDFRTAVVENALVGGESASRGSIIGMLLGAYHGVQGIPSEWLGAMASTARAGDQITHVMGRVFNNARDEL* # ORIGINAL: g1722.t1 original gene structure, not modified by PASA NODE_1123_length_13780_cov_41.8755 AUGUSTUS gene 6403 9085 . - . ID=g1722;Name=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS mRNA 6403 9085 . - . ID=g1722.t1;Parent=g1722;Name=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 9002 9085 . - . ID=g1722.t1.exon1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 9002 9085 . - 0 ID=cds.g1722.t1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 8609 8724 . - . ID=g1722.t1.exon2;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 8609 8724 . - 0 ID=cds.g1722.t1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 8210 8366 . - . ID=g1722.t1.exon3;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 8210 8366 . - 1 ID=cds.g1722.t1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 7132 7980 . - . ID=g1722.t1.exon4;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 7132 7980 . - 0 ID=cds.g1722.t1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 6814 6913 . - . ID=g1722.t1.exon5;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 6814 6913 . - 0 ID=cds.g1722.t1;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 6403 6548 . - . ID=g1722.t1.exon6;Parent=g1722.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 6403 6548 . - 2 ID=cds.g1722.t1;Parent=g1722.t1 #PROT g1722.t1 g1722 MATDVRDILALDDGGDAQDGAPGVRQKKKRIPREPQEKEKRPEGMGRELFNLTGGRPPIAQTKPVGGYKMTKASLSNRKAVPWKWMDFTNPARKDALVLRHWRKAQDEGKEYPFAKFNRVLNIPTYTDEEYAAHVKGQGTWTREETDTLFDLCKRFDLRFVTVHDRYSVADHPQRTMEDLKARYYSVCSDLAIGRTPPGSTPDRALLAALRFDGDHETLRKQQLEKILSRTPAQVAEEKELAEEVRRIEQRGKDRDRERTHVERLMSGDATAAASAMGSLAAMETAALAGDAAGGAAPDAIDTPGDKKALKKRRKSDGATAGDAGASGAVGDDAPVKKERGTGAFLRSSRFAPMTVGLKAGKRVDMLLEDLGITTRLMPTARVCDQFDALRKDILMLLDIKKHTDNREYELKTLRHRKESLLRGETVPPDATPAEAKTPSAVAVATGVKRPERRDSLALSVDGRKRARGEDADGADAKRLKRA* # PASA_UPDATE: g1724.t1, single gene model update, valid-1, status:[pasa:asmbl_473,status:12], valid-1 NODE_1123_length_13780_cov_41.8755 . gene 11535 13697 . + . ID=g1724;Name=g1724.t1 NODE_1123_length_13780_cov_41.8755 . mRNA 11535 13697 . + . ID=g1724.t1;Parent=g1724;Name=g1724.t1 NODE_1123_length_13780_cov_41.8755 . five_prime_UTR 11535 11606 . + . ID=g1724.t1.utr5p1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 11535 11767 . + . ID=g1724.t1.exon1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 11607 11767 . + 0 ID=cds.g1724.t1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 11914 12055 . + . ID=g1724.t1.exon2;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 11914 12055 . + 1 ID=cds.g1724.t1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 12290 12344 . + . ID=g1724.t1.exon3;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 12290 12344 . + 0 ID=cds.g1724.t1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 12657 12807 . + . ID=g1724.t1.exon4;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 12657 12807 . + 2 ID=cds.g1724.t1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 13193 13305 . + . ID=g1724.t1.exon5;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 13193 13305 . + 1 ID=cds.g1724.t1;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . exon 13465 13697 . + . ID=g1724.t1.exon6;Parent=g1724.t1 NODE_1123_length_13780_cov_41.8755 . CDS 13465 13697 . + 2 ID=cds.g1724.t1;Parent=g1724.t1;3_prime_partial=true #PROT g1724.t1 g1724 MEKITMAVPFMRGDSVAVTGKAELEHTLEGHVGCVNMAVYIPEVEAVISVSDDRTMRVWLKRDNGDFWPSVCQSLLSPTTCIAYEKKDRVLFVGLESGSILEYQCTEDFNRVALKNDHTLHSARVNMMEYVPGKEWLFSVGRDKICYWTETEDGKKLGKFVGDAWLTCLKFDLKTSHLFLGDFSGNIDIVKINGTKMEPVTTLKGHEGSIRSLTWDAKRQRLFSGSFDRTVWVWDIGGNKGRAYELHGHGAKVKSVIYVEGDRRVISAGDDEKIIFWDMKKKRQE # ORIGINAL: g1721.t1 original gene structure, not modified by PASA NODE_1123_length_13780_cov_41.8755 AUGUSTUS gene 262 6232 . + . ID=g1721;Name=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS mRNA 262 6232 . + . ID=g1721.t1;Parent=g1721;Name=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 262 407 . + . ID=g1721.t1.exon1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 262 407 . + 1 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 661 802 . + . ID=g1721.t1.exon2;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 661 802 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 1065 1143 . + . ID=g1721.t1.exon3;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 1065 1143 . + 1 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 1481 1569 . + . ID=g1721.t1.exon4;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 1481 1569 . + 0 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 1771 1829 . + . ID=g1721.t1.exon5;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 1771 1829 . + 1 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 2204 2254 . + . ID=g1721.t1.exon6;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 2204 2254 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 2575 2869 . + . ID=g1721.t1.exon7;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 2575 2869 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 3135 3435 . + . ID=g1721.t1.exon8;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 3135 3435 . + 1 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 3608 3773 . + . ID=g1721.t1.exon9;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 3608 3773 . + 0 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 4013 4168 . + . ID=g1721.t1.exon10;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 4013 4168 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 4481 4794 . + . ID=g1721.t1.exon11;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 4481 4794 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 4919 5008 . + . ID=g1721.t1.exon12;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 4919 5008 . + 0 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 5239 5331 . + . ID=g1721.t1.exon13;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 5239 5331 . + 0 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 5569 5692 . + . ID=g1721.t1.exon14;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 5569 5692 . + 0 ID=cds.g1721.t1;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 5901 6232 . + . ID=g1721.t1.exon15;Parent=g1721.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 5901 6232 . + 2 ID=cds.g1721.t1;Parent=g1721.t1 #PROT g1721.t1 g1721 PSERGARDIDTIMEEIQQMKAFSHFAPSLQRELCSVLSLDIVERAGTVLFRQGDTGTAWYITREGEVDVLVDERLACTLGEGNGFGDWALVNEKPRSATVVTKVDDCQFLKVEKGDYRRILKNLEQNTVRLSEFGRVVLVLENRLIGEKQKGFLVVCGTPDKLFERIGDQSDPFFVTDFLLTYRIFMTPKSQDVALSRDVASTHTSPLVALSFQSNGPSDTLPTLRRVVWFVVNWVKSHWRDFADATSRERLHEFERRLAELADRNAMAVLRDDAAALADAIKTSAGRVRPFWTDALTAGDGAAAGGDGSAVSGTSSAPGDAATSLRIGRSMSSPTIVRKGSFSRQSRESPRESKEEESGTAFARRRSVREDDQSTTPEKPTVAQKRTRGFSVGSRSSTLQKHSSAGAVAASAAVAAAVAAASGSTATMATGAASARSGHLTEAVRIYTENNDSYRTIPIAAGAHVIDVLKATLERFNITGDETTHSIHETSLYEPLQRVLSNMDAAAGVEFSPEECEYTLRPLGHAVALSCDEMARSNHAQSRLLESDAKEIAWLLTMKDASMFGAVDDVQFVHYLYPTEEPGRGREKLTEMVQRFNDLTFWVVTEICYSKELSVRVQVVVQFIKIAKYCRACSNFNSLCAIVTGLQHFLVQRMAETWERVSPKHMAHLKKMTELIAPARNMMTYRSALLTSRLPLVPLLPLVMKDLTFINDGNPSKVDGLVNFEKLRMLSRVIRTTVGYVSVGYDPMTLLGSLRAKTWAPTFGSKHRALTWTAKGSAVYLYLENLPVVSDEGKLYALAGARNKEDTRDN* # ORIGINAL: g1723.t1 original gene structure, not modified by PASA NODE_1123_length_13780_cov_41.8755 AUGUSTUS gene 9559 11264 . + . ID=g1723;Name=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS mRNA 9559 11264 . + . ID=g1723.t1;Parent=g1723;Name=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 9559 9708 . + . ID=g1723.t1.exon1;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 9559 9708 . + 0 ID=cds.g1723.t1;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 9835 9947 . + . ID=g1723.t1.exon2;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 9835 9947 . + 0 ID=cds.g1723.t1;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 10116 10474 . + . ID=g1723.t1.exon3;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 10116 10474 . + 1 ID=cds.g1723.t1;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 10596 10673 . + . ID=g1723.t1.exon4;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 10596 10673 . + 2 ID=cds.g1723.t1;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS exon 10756 11264 . + . ID=g1723.t1.exon5;Parent=g1723.t1 NODE_1123_length_13780_cov_41.8755 AUGUSTUS CDS 10756 11264 . + 2 ID=cds.g1723.t1;Parent=g1723.t1 #PROT g1723.t1 g1723 MGDDTSSSEVPLLLPCVGSDAAVDLRTVSWDTYCKIDDDLDEALKSRVPDTEYVVDVGGFKGSVSYGTVLDTVMAVEAECMMPVFAHCLSSTFNTWRVVSSQDISSRLENDADDAGSSDDDASGDESADGSDSEENAAGDEEWMDEDADRFSRVLLGINLIADAVYDPEAPEIATSDILQKFVRTVRGVAKMSMRGSTVKQRLPVSEGAANAERVIEWASRCESSAALVIEYRDATGRTLDFTGSVLWDAFLSLGLVFSPEKGGFVFNSDVINGDDDAVFAATPFAGKFDSLALSRDAPCGVSRVRIGFFLPLTRRPCAVAEAMLRAAQYVRRRQLEAAESAGDVPSAVGSDRATPSCVLLDEHAETELDVGRWKRGVEEAAREMRVMGVSPGSLIAASLFG* # PASA_UPDATE: g5310.t1, single gene model update, valid-1, status:[pasa:asmbl_3433,status:3], valid-1 NODE_2076_length_7845_cov_53.5089 . gene 5041 6929 . + . ID=g5310;Name=g5310.t1 NODE_2076_length_7845_cov_53.5089 . mRNA 5041 6929 . + . ID=g5310.t1;Parent=g5310;Name=g5310.t1 NODE_2076_length_7845_cov_53.5089 . five_prime_UTR 5041 5116 . + . ID=g5310.t1.utr5p1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 5041 5183 . + . ID=g5310.t1.exon1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 5117 5183 . + 0 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 5298 5378 . + . ID=g5310.t1.exon2;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 5298 5378 . + 2 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 5722 5831 . + . ID=g5310.t1.exon3;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 5722 5831 . + 2 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 6060 6131 . + . ID=g5310.t1.exon4;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 6060 6131 . + 0 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 6368 6493 . + . ID=g5310.t1.exon5;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 6368 6493 . + 0 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . exon 6651 6929 . + . ID=g5310.t1.exon6;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . CDS 6651 6740 . + 0 ID=cds.g5310.t1;Parent=g5310.t1 NODE_2076_length_7845_cov_53.5089 . three_prime_UTR 6741 6929 . + . ID=g5310.t1.utr3p1;Parent=g5310.t1 #PROT g5310.t1 g5310 MGLTISRVFANLFGQKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGVIFVVDTNDRERCNEAREELQRMLSEDELRDAALLVFANKQDLPNAMSVSELTTKLDLTNLKNRKWYIQATSAPTGDGLYEGLDWLSTQMAARS* # PASA_UPDATE: g5309.t1, single gene model update, valid-1, status:[pasa:asmbl_3436,status:12],[pasa:asmbl_3437,status:12], valid-1 NODE_2076_length_7845_cov_53.5089 . gene 110 4693 . - . ID=g5309;Name=g5309.t1 NODE_2076_length_7845_cov_53.5089 . mRNA 110 4693 . - . ID=g5309.t1;Parent=g5309;Name=g5309.t1 NODE_2076_length_7845_cov_53.5089 . five_prime_UTR 4646 4693 . - . ID=g5309.t1.utr5p1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 4622 4693 . - . ID=g5309.t1.exon1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 4622 4645 . - 0 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 4371 4463 . - . ID=g5309.t1.exon2;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 4371 4463 . - 0 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 4120 4223 . - . ID=g5309.t1.exon3;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 4120 4223 . - 0 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 2104 4005 . - . ID=g5309.t1.exon4;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 2104 4005 . - 1 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 1632 1747 . - . ID=g5309.t1.exon5;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 1632 1747 . - 1 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 855 1389 . - . ID=g5309.t1.exon6;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 855 1389 . - 2 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 412 590 . - . ID=g5309.t1.exon7;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 412 590 . - 1 ID=cds.g5309.t1;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . exon 110 210 . - . ID=g5309.t1.exon8;Parent=g5309.t1 NODE_2076_length_7845_cov_53.5089 . CDS 110 210 . - 2 ID=cds.g5309.t1;Parent=g5309.t1;3_prime_partial=true #PROT g5309.t1 g5309 MEGATEAQVVALINEAQLCSDKDAKLDALTKAKELLINKEPELLPRHIDWILQFQHDRTVDVQRFVVDFVEDACKRIPQLFPRVVPTLLLLSDPSANATVLKRIAVCVTNIFGPAFLAACVGFNAPDVQMGWAGILQLKSRVVEMVRAPNDGVRTQAIKFVEAVILAYTPRTPDSESRTDGAFAGFGMAIDEACANALPENHPTLKPADLAIEARDLFDLVAARLQAPDLTSANAIVAVTTLSQIARQRPGFMNRAIGCLMPLRNAEKLPSGYTHAQVASVHKALKLQLLGLLKHPASASLQEPLAAALVGLGAKRQDFERFMRAREKRPAPSDSPLDFDALAAPAAKRPRVDVPALQPPPHGHVQQSPYEAAMNMHQIGFAPQGHGVGHVPPGVALANAIASAISAGSIPHVTPSQLVELLLGVLPNVSDASLTSLRDGTVAHHDGQQQHLQQHQQPHQQQYIQPQLQMQQQQQQQQQQQQQQQQQQPQPAQQAQQQAPPAKRRDPRLRDPRLQRAEETTAAVPSEIEPTQQRTTEPMDVQMADAQPAAVRPKMQKFVLSSVELTPAQRHSMALSAFRRILSVDEASLGAHSAALRARILARLVSLHPCIADGAYDGDSTDLLVGHIQEQPVQRHDLAMSWLHLEHAQCVEAMTPGGDLCATGQPKYAVGGLAVYSDPEYARCMKRYDECLQRHLEGLRVHLDPKDRLFTRACVDVPELTPGAIEVVRSMCHDEVRSLIAMATLRDVALERPPARAVCVTALLELATDPRSDALRQSAIHVTKRLFAHPAMTEQIQKFGVNSLEEILDIEAEIAPSGAAGVAGATATATVNSTADGDVMGSAPVFPKNEPPSEGADGVTGAQSEAAAPGDQPPQNVADAPNSNSNSNLNSNANSNPEAAVESDVVPKIQLFYALCAIRPELLQRLAEVFAQVSSPVKRILLRQADALVRALEMDSPAVLSLVATLPEGSEPLVLRILHVLTEKGAPSRGLVAVVRNVYFARGSDARFLIPVLSGMEK # ORIGINAL: g11274.t1 original gene structure, not modified by PASA NODE_2575_length_5832_cov_38.7028 AUGUSTUS gene 206 963 . - . ID=g11274;Name=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS mRNA 206 963 . - . ID=g11274.t1;Parent=g11274;Name=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS exon 766 963 . - . ID=g11274.t1.exon1;Parent=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS CDS 766 963 . - 0 ID=cds.g11274.t1;Parent=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS exon 402 581 . - . ID=g11274.t1.exon2;Parent=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS CDS 402 581 . - 0 ID=cds.g11274.t1;Parent=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS exon 206 275 . - . ID=g11274.t1.exon3;Parent=g11274.t1 NODE_2575_length_5832_cov_38.7028 AUGUSTUS CDS 206 275 . - 0 ID=cds.g11274.t1;Parent=g11274.t1 #PROT g11274.t1 g11274 MAAQVAIGASAVVGVGAGDGIPWGGLLKLDFTQLQEVLVGILKRLDGHDTSIASLNAESVKTNEAAIELKNSLSLSLRNEFTNAIEEGIHPIKVQMTALDESVKESSEKAKVAYDKATEAIAHTPSNFQEMVDKLASLQIQMSNMVAEF # PASA_UPDATE: g11275.t1, single gene model update, valid-1, status:[pasa:asmbl_4574,status:12], valid-1 NODE_2575_length_5832_cov_38.7028 . gene 2382 3564 . + . ID=g11275;Name=g11275.t1 NODE_2575_length_5832_cov_38.7028 . mRNA 2382 3564 . + . ID=g11275.t1;Parent=g11275;Name=g11275.t1 NODE_2575_length_5832_cov_38.7028 . five_prime_UTR 2382 2461 . + . ID=g11275.t1.utr5p1;Parent=g11275.t1 NODE_2575_length_5832_cov_38.7028 . exon 2382 2734 . + . ID=g11275.t1.exon1;Parent=g11275.t1 NODE_2575_length_5832_cov_38.7028 . CDS 2462 2734 . + 0 ID=cds.g11275.t1;Parent=g11275.t1 NODE_2575_length_5832_cov_38.7028 . exon 2913 3564 . + . ID=g11275.t1.exon2;Parent=g11275.t1 NODE_2575_length_5832_cov_38.7028 . CDS 2913 3494 . + 0 ID=cds.g11275.t1;Parent=g11275.t1 NODE_2575_length_5832_cov_38.7028 . three_prime_UTR 3495 3564 . + . ID=g11275.t1.utr3p1;Parent=g11275.t1 #PROT g11275.t1 g11275 MSLFRSFLFLKNGLAGISKVTTVPDWYVVDFEDGCPRPSDKMRLRGETIVAMPGHARALASETTSLCVRVNPVDEIDAVVADLHVLAEPVKAVMLPKVQSPACIAKFEGLLSEAERGAGLPIGHTKLIPILETPGGVLSARDIATSSKRITALAFGHADFVAAMRGKESPECISPARHTVAMAARAANVHVLDSPCLRLSDPDALYAECQTARKIGYSGKIALHPRQIVTLHRAFSPSDEEIEEAFRVHDAGVKGGGAQYVSVSHVADARRILEYAILIKEREK* # PASA_UPDATE: g11276.t1, single gene model update, valid-1, status:[pasa:asmbl_4575,status:12],[pasa:asmbl_4576,status:12], valid-1 NODE_2575_length_5832_cov_38.7028 . gene 3606 5832 . - . ID=g11276;Name=g11276.t1 NODE_2575_length_5832_cov_38.7028 . mRNA 3606 5832 . - . ID=g11276.t1;Parent=g11276;Name=g11276.t1 NODE_2575_length_5832_cov_38.7028 . five_prime_UTR 5832 5832 . - . ID=g11276.t1.utr5p1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . exon 5751 5832 . - . ID=g11276.t1.exon1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . CDS 5751 5831 . - 0 ID=cds.g11276.t1;Parent=g11276.t1;5_prime_partial=true NODE_2575_length_5832_cov_38.7028 . exon 5421 5511 . - . ID=g11276.t1.exon2;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . CDS 5421 5511 . - 0 ID=cds.g11276.t1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . exon 4981 5165 . - . ID=g11276.t1.exon3;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . CDS 4981 5165 . - 2 ID=cds.g11276.t1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . exon 4429 4680 . - . ID=g11276.t1.exon4;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . CDS 4429 4680 . - 0 ID=cds.g11276.t1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . exon 3606 4179 . - . ID=g11276.t1.exon5;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . CDS 3958 4179 . - 0 ID=cds.g11276.t1;Parent=g11276.t1 NODE_2575_length_5832_cov_38.7028 . three_prime_UTR 3606 3957 . - . ID=g11276.t1.utr3p1;Parent=g11276.t1 #PROT g11276.t1 g11276 QQQQQQQQQQQQQQQQQQQQQQQQQALLTSPGYLLAILNVVMLVCVVPFMDNIKPKQDGKKKTRYGCAFSRDVLLLLFLTLVIRSVVAVIETIGTPLYIHVEGLTNNDHSIQQASFFFLYLGLGGMIVYFTVEFAYRAMNAHGLLTFAFASILAGSLMLITYGLTLGFQRFLIGAVLIWSLGSPMTQVLILAMYTEVLGPGPQGIMMGWFTVAGSVGSIFARSLSGVVSADVLFYISAGMAFTCLAISVTFYVRFHVKKRNEGDRQPLLPVSEEKQ* # ORIGINAL: g1752.t1 original gene structure, not modified by PASA NODE_1032_length_14537_cov_40.5212 AUGUSTUS gene 617 3664 . - . ID=g1752;Name=g1752.t1 NODE_1032_length_14537_cov_40.5212 AUGUSTUS mRNA 617 3664 . - . ID=g1752.t1;Parent=g1752;Name=g1752.t1 NODE_1032_length_14537_cov_40.5212 AUGUSTUS exon 617 3664 . - . ID=g1752.t1.exon1;Parent=g1752.t1 NODE_1032_length_14537_cov_40.5212 AUGUSTUS CDS 617 3664 . - 0 ID=cds.g1752.t1;Parent=g1752.t1 #PROT g1752.t1 g1752 MASAASARVAERDAPAAAADDECLLSVEVVVGAVADLDVACRIPAVAFRLLDYPTVVVHHVNPSDTDKLRRAAYMDNDAGIDRALEKLRDADGGFLFNTGKSCLFRASLSGFAAQMQKTPLYIMLVDLWEADNVRLVASTSLRLDGCAGKIVADADSHGRDAPSSALTKGAFPLFDLMGVEVGVISFTVRLMNLGAAMLKHVANASPENGAMSVPSDGMFHMAGEYGPSGDGDSDAHEGHDDSHSQSDQRKGVIGRPQQQHQHQHRHEGDLPGLRVSRDSARVSHAPSSQAARLGITDEAEPPHTHGAVASSGGRMDAPVAVFRDEEGGDAGFVPGGILIDGRERGSRAAAVDGCGGGRNDVDSTSLPSSEFPADTLLRNVYCPPALQFDAAWSRDYVPPEAQSRDQYGLFEAGFPKDAIYGPSDPPLPPQVAIKRTAVGYDPQMPFPGAAPSFPAYNGFGGFLNGLWLDMQYVRTPEYAREILRGFWDDRISLQAPTQDAPLSRMSRGQPANEPKGTAGHAASSGIPRRLAAHFGALFGGRPLSPRQQPMVSPARRPTSQQLSGQKRPGGQGGARPASAASAATSAPSRAVSRASARDGVPSSKQPNIPVRLTRSERLRQYHVLTRMTDAELEIEAGLLPGELYHAHHKYSTAEQAVLAKFGRSLSPSVSPKMVRRSPAPPKQAPASKRTVADVRNGVDTSETALIRDAQPSPSEKSGAASSASSPSGVLPPGAINARYAMPSTEPAMHWDPSGRAGFRKDAGVDFGEHPADAAPHVTQGKENASPTNRGAVSRPRVAQTPVRTSGLASAASKARARELEANGTSIPLETKGKSAIGAAFVRRAQPAHRSPTGSPGNGSDHVADSQASDDDASAKSTPHPQRSEKTATDSRSQSMDSRASDEPTRSRSSRQSHSSRSGTSRASGMSSPGDAAQQRSHSSASSVIDESLASVSHSTDSSKSHARTAEVTESEMAGDESVVTGRTLTQSADRSRASSTVGSRGEQSLSVSDMSDIS* # PASA_UPDATE: g1754.t1, single gene model update, valid-1, status:[pasa:asmbl_120,status:12], valid-1 NODE_1032_length_14537_cov_40.5212 . gene 10638 13656 . - . ID=g1754;Name=g1754.t1 NODE_1032_length_14537_cov_40.5212 . mRNA 10638 13656 . - . ID=g1754.t1;Parent=g1754;Name=g1754.t1 NODE_1032_length_14537_cov_40.5212 . five_prime_UTR 13502 13656 . - . ID=g1754.t1.utr5p1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 13474 13656 . - . ID=g1754.t1.exon1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 13474 13501 . - 0 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 13012 13073 . - . ID=g1754.t1.exon2;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 13012 13073 . - 2 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 12605 12684 . - . ID=g1754.t1.exon3;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 12605 12684 . - 0 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 12322 12364 . - . ID=g1754.t1.exon4;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 12322 12364 . - 1 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 11387 11962 . - . ID=g1754.t1.exon5;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 11387 11962 . - 0 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 11038 11119 . - . ID=g1754.t1.exon6;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 11038 11119 . - 0 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . exon 10638 10889 . - . ID=g1754.t1.exon7;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . CDS 10774 10889 . - 2 ID=cds.g1754.t1;Parent=g1754.t1 NODE_1032_length_14537_cov_40.5212 . three_prime_UTR 10638 10773 . - . ID=g1754.t1.utr3p1;Parent=g1754.t1 #PROT g1754.t1 g1754 MATKRPSLEGGSGNQQAPKHPRVETDEDDSSFPTTLRGFGYEFNADGQLRDISTGGPFKFEVKPGDRAYNQASYEALGAVMDEHIYGLLESAGLARIATPMDGDASEFTARGFIFATPNALTADCLLVLIHGAGVVRAGQWSRRLIINDSLKAGTVLPYIERALLNGYGVVVTNTNQHTDGNGAPIRGSRSPQQHGVHVWQHYVSRAAAQQIAIVAHSYGGIVTGAISEHFADAFMRRVCAVAFTDSVSFSVRDAALKSFFAKKSINWASSDAPLDANAGRSFGPRSKSAGTAVHEYTSWNAFESVFRFFEESMPSASAPAASAREDL* # PASA_UPDATE: g1753.t1, single gene model update, valid-1, status:[pasa:asmbl_119,status:3], valid-1 NODE_1032_length_14537_cov_40.5212 . gene 4324 9972 . - . ID=g1753;Name=g1753.t1 NODE_1032_length_14537_cov_40.5212 . mRNA 4324 9972 . - . ID=g1753.t1;Parent=g1753;Name=g1753.t1 NODE_1032_length_14537_cov_40.5212 . five_prime_UTR 9785 9972 . - . ID=g1753.t1.utr5p1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 9460 9972 . - . ID=g1753.t1.exon1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 9460 9784 . - 0 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 9106 9190 . - . ID=g1753.t1.exon2;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 9106 9190 . - 2 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 8597 8777 . - . ID=g1753.t1.exon3;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 8597 8777 . - 1 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 7887 7981 . - . ID=g1753.t1.exon4;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 7887 7981 . - 0 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 7508 7698 . - . ID=g1753.t1.exon5;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 7508 7698 . - 1 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 7185 7279 . - . ID=g1753.t1.exon6;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 7185 7279 . - 2 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 6471 6969 . - . ID=g1753.t1.exon7;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 6471 6969 . - 0 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 6195 6253 . - . ID=g1753.t1.exon8;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 6195 6253 . - 2 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 5551 6024 . - . ID=g1753.t1.exon9;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 5551 6024 . - 0 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 5231 5360 . - . ID=g1753.t1.exon10;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 5231 5360 . - 0 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 4866 4973 . - . ID=g1753.t1.exon11;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 4866 4973 . - 2 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . exon 4324 4724 . - . ID=g1753.t1.exon12;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . CDS 4627 4724 . - 2 ID=cds.g1753.t1;Parent=g1753.t1 NODE_1032_length_14537_cov_40.5212 . three_prime_UTR 4324 4626 . - . ID=g1753.t1.utr3p1;Parent=g1753.t1 #PROT g1753.t1 g1753 MTLAIDHILAAAACSGRTGMPDRCNLYLNDGDHVCAIYNSEDERMHLVARFLLEGIEKSHKIVYMLADEDKPSFLQRVLHGKDFDTARDAEASGQLKILGFSETYLGSGNDFGIDATINLFHEARLEALSCGYKNFRVTAEPTWIVTKDVDLRRLFCQYESKVNEFFHETGAIGLCQYNRTAFPADTLLNVLMSHPTAWLGLVSFQNFYYMPPTEYLSEDVSKSMLDRWINNLFERNGMEHKLNERTLELERANASLRIEMEERKKAECKKLEAEAMNKAKTDLLAVISHEMRTPLNGIIPLSQWLLSGSDLTCDQREAAEIIQTSANQLLSIISDVLDFCKFEHGAISLQCDGFDIRKSIADVWRAVAAAQRIVTFAHDAPAAHGSLSLSSRVNAASDIATAGRRDPPKGLSFAVSIPDTVPPLIVNDEMRVRQILFNLLSNACKFTADGGTITISAALVVKGDREHVTFTVADTGIGIAKDKWHIIFGAFSQVDPSMTRKYGGTGLGLAICRRILDAMGGSIWFESEVDRGSKFHFSIPLVVSGPQCTSTHIPMHRPSFYAPLESSPDTQCLAPSNMTDTTRDRVGHFHRTTAASLDNRVFECASGSPTCNSQTLSVKMPPPHTGVSGGVTPSDLTRKRRAIDIPGVSLENGSVRVLCAEDNHINQRVIVRLLSRMQGCQLTLVENGVEAVEAVMKHDYDCVLMDLSMPVLDGIAASEQISALPDWSNGSGRRRPRLVALTASALASEARCRQAGIEFVLSKPVRYDALEEAILGRR* # ORIGINAL: g5400.t1 original gene structure, not modified by PASA NODE_2120_length_7631_cov_35.1306 AUGUSTUS gene 2514 3299 . + . ID=g5400;Name=g5400.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS mRNA 2514 3299 . + . ID=g5400.t1;Parent=g5400;Name=g5400.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS exon 2514 3299 . + . ID=g5400.t1.exon1;Parent=g5400.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS CDS 2514 3299 . + 0 ID=cds.g5400.t1;Parent=g5400.t1 #PROT g5400.t1 g5400 MAMRTSSQGSLSAAVEAPLSLSDALREAVVAFYTYDSTKRMHCVEMKRLRVAFAAFRDGVDEAPSGLLWGRACFYLWCWSNEHPDNSNEHRHCEEYRQLVGDAGLHALLNSVAESERDGPWEYECGECLYEGIGTEVDVAAALAVWERGADNTHALCAMRLGSHYEGEGNGAEAFKWYMKAAAQGNVDARFNVGFCYEHGDGVNKDPAKAFKWYMKAAKQGNVDAQFNVGFCYEHGDGVNKDPAKAFKWYMKAXXXCRLLL* # ORIGINAL: g5401.t1 original gene structure, not modified by PASA NODE_2120_length_7631_cov_35.1306 AUGUSTUS gene 3349 3561 . + . ID=g5401;Name=g5401.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS mRNA 3349 3561 . + . ID=g5401.t1;Parent=g5401;Name=g5401.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS exon 3349 3561 . + . ID=g5401.t1.exon1;Parent=g5401.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS CDS 3349 3561 . + 0 ID=cds.g5401.t1;Parent=g5401.t1 #PROT g5401.t1 g5401 MKAAKQGNVDAQFSVGFCYEHGDGVNKDPAKAFAWYMKAAKQGDAVAQVRVGYCYEYGKGVARHRGASLK* # ORIGINAL: g5402.t1 original gene structure, not modified by PASA NODE_2120_length_7631_cov_35.1306 AUGUSTUS gene 3673 6015 . + . ID=g5402;Name=g5402.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS mRNA 3673 6015 . + . ID=g5402.t1;Parent=g5402;Name=g5402.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS exon 3673 6015 . + . ID=g5402.t1.exon1;Parent=g5402.t1 NODE_2120_length_7631_cov_35.1306 AUGUSTUS CDS 3673 6015 . + 0 ID=cds.g5402.t1;Parent=g5402.t1 #PROT g5402.t1 g5402 MRAAEQGVVDAQFTVGERFASGDGVVKDRVAAFKWFMRAAEQGKANAQCKVGDLYKKGKGVAKNPAEAFKWYLRVAEQGDKEATRTRDIDECIAKTAECYEKGFGVKQDLAEARKWYMKVMSGPHARRAGVMIERGIGGPADEAAAFVRYATTDSQNDLVRMRCGAVDRGVPLDLAKLAPMLRAASGRICHRETCEIYVCEILPYDVRAAEPLDMSSPRFKGFLTPFITSEDCAPHNALSLRELDMMRLSAAIREKAEWRHKRKDAEIVARWREEVLSEDFTPNMFRYVVKELEYYASLLCGAIEPSSVTGTWQADGHVPPELKARLVEGVSVLENVPERLKDYHPGSNRQVIDLVHPSLYCYVKGLSRVTSTEANPPLAWMGAGDIDTSEDVEGKSEAAYSWSKKYQWLPAEIDVNGEGETTVRSYINNLHPHHHKELYSVIASIFSFFVPLFSRVLTDTIHPAEPRLEIPDDWCRSQRDAPHSDDEYDGAPHGTVTVCGDTADGTVDGAGDVGDGVDSDDMGDEDEDDEDDDYYDGNANQPGVPGFRAPEAPLELVELRGRRLQVIVKLANIVLTPDSPEYAGGVWHVEGMANERIVATGIYYYASENISESRLSFRAAVAEPHAEQNDHSGVYSMFGMSIQQLNQERGSILTKEDRCIAFPNTLQHRVLPFRLIDPTLPGVRKILVFFLVDPSKRVLSTLHVPPQQRDWYVESVRTAGGAMRCLPSEIADEIVSYLDWPMSLDVAREHREVLMKERKYFVKQNTEEVFEREFSLCEH* # ORIGINAL: g9791.t1 original gene structure, not modified by PASA NODE_4016_length_2343_cov_58.019 AUGUSTUS gene 1666 2068 . - . ID=g9791;Name=g9791.t1 NODE_4016_length_2343_cov_58.019 AUGUSTUS mRNA 1666 2068 . - . ID=g9791.t1;Parent=g9791;Name=g9791.t1 NODE_4016_length_2343_cov_58.019 AUGUSTUS exon 1897 2068 . - . ID=g9791.t1.exon1;Parent=g9791.t1 NODE_4016_length_2343_cov_58.019 AUGUSTUS CDS 1897 2068 . - 0 ID=cds.g9791.t1;Parent=g9791.t1 NODE_4016_length_2343_cov_58.019 AUGUSTUS exon 1666 1721 . - . ID=g9791.t1.exon2;Parent=g9791.t1 NODE_4016_length_2343_cov_58.019 AUGUSTUS CDS 1666 1721 . - 2 ID=cds.g9791.t1;Parent=g9791.t1 #PROT g9791.t1 g9791 PGKAAAGVPPVAARSNRGYSGGGGGGGGSGGSGGGGGGPGINRGGGNGGLNKKIGRIGGAGAGMSCPQGPMGGGG* # ORIGINAL: g7352.t1 original gene structure, not modified by PASA NODE_3066_length_4411_cov_43.2499 AUGUSTUS gene 2167 4366 . + . ID=g7352;Name=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS mRNA 2167 4366 . + . ID=g7352.t1;Parent=g7352;Name=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 2167 2287 . + . ID=g7352.t1.exon1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 2167 2287 . + 0 ID=cds.g7352.t1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 2529 2708 . + . ID=g7352.t1.exon2;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 2529 2708 . + 2 ID=cds.g7352.t1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 2976 3057 . + . ID=g7352.t1.exon3;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 2976 3057 . + 2 ID=cds.g7352.t1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 3473 3698 . + . ID=g7352.t1.exon4;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 3473 3698 . + 1 ID=cds.g7352.t1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 4004 4126 . + . ID=g7352.t1.exon5;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 4004 4126 . + 0 ID=cds.g7352.t1;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 4238 4366 . + . ID=g7352.t1.exon6;Parent=g7352.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 4238 4366 . + 0 ID=cds.g7352.t1;Parent=g7352.t1 #PROT g7352.t1 g7352 MATTSPRSPALRKMSSLTSSDAPLIVAPPARGGTPGGNKLNRFFGEDVKVKNKAAFVEKGVDQDDIKFRHPQTTEFPLVLAASFERLVERLTHEKYAGKWHMKFQQTFLMTYHSFATPANLFDELLKRFDIVIEPTRTACDDEDDDFDYDNPSPSPRGRRSEDASTGGGASADPSMTIKFRVLATLIKWVDRRKILDDKALLEDKKLRERIEDWAEEVCATARQNPSKEKEILNSATRLVKLLQTQYTDDFKVTYSSTGLAVTSGVSSHSGQSEASEFSIDSLDGA* # ORIGINAL: g7351.t1 original gene structure, not modified by PASA NODE_3066_length_4411_cov_43.2499 AUGUSTUS gene 105 792 . - . ID=g7351;Name=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS mRNA 105 792 . - . ID=g7351.t1;Parent=g7351;Name=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 724 792 . - . ID=g7351.t1.exon1;Parent=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 724 792 . - 0 ID=cds.g7351.t1;Parent=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 438 591 . - . ID=g7351.t1.exon2;Parent=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 438 591 . - 0 ID=cds.g7351.t1;Parent=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS exon 105 218 . - . ID=g7351.t1.exon3;Parent=g7351.t1 NODE_3066_length_4411_cov_43.2499 AUGUSTUS CDS 105 218 . - 2 ID=cds.g7351.t1;Parent=g7351.t1 #PROT g7351.t1 g7351 MRFGKRLEAQAVPEWTPKYINYKRLKKYVKAIKVAKAQRLAAGLDASVDVEEDSARLEETCDMEMHEHSTGDETERFLRDAERIYGTRLNNQERDFLMFLGDEVHKANAFFE # PASA_UPDATE: g3591.t1, single gene model update, valid-1, status:[pasa:asmbl_10231,status:12],[pasa:asmbl_10232,status:12], valid-1 NODE_987_length_15047_cov_84.3933 . gene 2 15035 . + . ID=g3591;Name=g3591.t1 NODE_987_length_15047_cov_84.3933 . mRNA 2 15035 . + . ID=g3591.t1;Parent=g3591;Name=g3591.t1 NODE_987_length_15047_cov_84.3933 . five_prime_UTR 2 3 . + . ID=g3591.t1.utr5p1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 2 316 . + . ID=g3591.t1.exon1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 4 316 . + 0 ID=cds.g3591.t1;Parent=g3591.t1;5_prime_partial=true NODE_987_length_15047_cov_84.3933 . exon 471 1083 . + . ID=g3591.t1.exon2;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 471 1083 . + 2 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 1198 1381 . + . ID=g3591.t1.exon3;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 1198 1381 . + 1 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 1598 1825 . + . ID=g3591.t1.exon4;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 1598 1825 . + 0 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 2039 2534 . + . ID=g3591.t1.exon5;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 2039 2534 . + 0 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 2728 3618 . + . ID=g3591.t1.exon6;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 2728 3618 . + 2 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 3818 4121 . + . ID=g3591.t1.exon7;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 3818 4121 . + 2 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 4290 10225 . + . ID=g3591.t1.exon8;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 4290 10225 . + 1 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 10409 10595 . + . ID=g3591.t1.exon9;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 10409 10595 . + 2 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 10799 10855 . + . ID=g3591.t1.exon10;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 10799 10855 . + 1 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 11107 11235 . + . ID=g3591.t1.exon11;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 11107 11235 . + 1 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 11377 14468 . + . ID=g3591.t1.exon12;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 11377 14468 . + 1 ID=cds.g3591.t1;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . exon 14665 15035 . + . ID=g3591.t1.exon13;Parent=g3591.t1 NODE_987_length_15047_cov_84.3933 . CDS 14665 15035 . + 2 ID=cds.g3591.t1;Parent=g3591.t1 #PROT g3591.t1 g3591 FLVAECNCQFASANLDCERNTRRGNIDGGYCRANDDATNIYPFTKSCQLRLGVDDRRATCNSMEVRCRPFDGTTSVSDVPNYSGTECNHASPDDGRRYWAHQGRPICYEFTMQSMPITSPMNAVSTTTPRQDLFPAGLFDWSASYPGVALGGKAGSNWDPTRSGCYDGYCSASKDTCTCAGTQYRGHRCDRIAPTGLVLKTAETPLSYPQWTDASTGDVHVWAKKPAIDPLERTTSILFQVSGDEGLKWISNINTLLPDWNLHSSADLSNKGGMYVRIEYEWDKDPNLRYNGVVQPRNVLPMNSADYCGTTTADVNKAEACANIDNVRDPLVLCNGNPADCTMTRSPTYRASDNFNNPADVARSSVRSQLFYETKKNIGGQTLPFEFRIDQSGCPLSSSVNNQFNADTITRCTMLTVKIFAMVNHPNPVYRHPPITSTLVVHFDTTRPKLDVIRDPFLNRNGGAFSRWIGGPGCNIKSENGGVGSCIGTLNNAAGIYHKDDLCKCYSVPDAANPIWPPGMAVNVGAFSEDNVNIQSISVSMRKVQPAVADIGSAYNVNPIPGPALQPSNTFTLPVSFAPVAPVNGGQYLVTFEVTNEAANFKNALFLICVDLTGPIARFPECVAGNQPGMLPLPWRNGASQFDACLDKQKGTAKTPAWDGRPWNARYMINFIDKAAPLTDPPHVALSGIHPTHTGLYLGDKERYYQTNINSLIVRWHGVFIEKERYILNPFETKTLLLDDLAHYDPPGAVLIGGNLDFLATTLSNADETGTARDKLTGIAYFDWTITCRSGPNSADSAIDGSKCTGNFSVDAAADRGRTTGGSIADHQIKLIPVYGLLTNGAWYHLSVRAVNFLGMASAWATQAVLIDQKPPIVSSIIVGTGMGAGWTRTGVSYQKTLRNMDIWLWLQDGESGIGSDGSWTSLEWQICGVNPVYACIPLQGYSQVFRSSEIPSRLQLGSFAENEPGDGFQVTCPASTCIGGTAGTRFECLPLSSPQDCSAATICAPVSSCPAPTAIQRQFFKLNTQAPVLVDGSMTLDQNAFNSYHFARHRIFVTASDRAGRWTEVSADIVLDLTPPEPGRIADVERADKTEDIDRQESPVLFSYWSGFADRESGIHHYEFAVGTPCTSTPPPASDPASKLPENFNCAKCPNGMLAYSDVLNGHVHGDKNPNRGSKQACPAAMCLVRAWAPTTSTLVADVDDLNEFRATRGRVDLTQDSYNPLDTKTSPALLKIDDAILKPMEALQYVSADKRAALSRFDRTFIHVVRAYSSTMDTAVACSDGITLDRGSKPSVSEVTVTNAVIGPDSKSYLTETNGAGLIRIDISWDYSDPSGTVSYFMVGLGTSIGYTQDTNRFYWEEGVLSKTKTIFKEPRIDLGNKFYVNIVAVNTAGRTTVGSSPEILVDLTPPSQVPVDVQQNSAGVIVLGWPAAVEPINGVWRYEWSVGLNPEGTDIKNFTGTRDIGYVDDAVGNCFRGQDCSRNIDGWVNDKLQDGGAYYFSIMAINFAQLFSISTMLSPFIVDRSPPLPGSVFDIVEAGSRVDVDFYDADTLKTLLVYWRGFNDPHSGITKYDIAVGTAPYAEDVLKFSDGNPDCGADIAGCNQYRIWPNSIVQTAVGGALPGGKTFYATVRATNLRGLRVSVSSNGFTVMAHKAMRISIGILSAVPPRPNSTVVFQAATSTISVTWTDVTNVTEFGRYEWAITLEEDRAPLSALAKANPESPGIIIRGTGVPFDQQFMPVAAKTSLVLAGLDLSPGDKYRVHIGVCSVAGVCSVTSSRLVVVDSTAPLPTPATVDFSYEALDVQSRLMNFKLNWDSFEEKESTIVSYEWALGTRSTGAALITPWFLYNGTVGTGKTRLSVTRALIVTVASTTDIYVSVRALGVTGLYGTMTVVAQFLNKAIAQTAPFVLDIAAAAEFRLTEARLQRLGAPGIVDADYTPTTASVAARWGGFPRGTVQYSVEWSVGVETAPGHENGIAIYESVMRFRPLVPLPLISIETTYANWINSVGWVDGSATPAGSASQSATFKENRLYFFNITNVNDVLTNGSRPILVEVGPYVYRQTETRLDATVVDGALSFIPFIQQSLVFPSPALLDGKTARSDSDMVWQVNPSYVELVYEYTDTSLKELSFFRAVTVMAIQYSLGLVTQQISEGYAALSTDAKVRVGNGVPPTIADAVWWQMSAMSVTREMGKAGVSELVGLYDMPLYEIGRFLRQMRPENWTDPTSGDFLDLRPEHAKAVYEMMGNPNRLSAFYAVAILATSTNSAPDANAPDIPSLASPLLWASINETADGLRFVALVADFVLAFPQSIIALNDGGLIVKKTVKDLAIGGTDKLRDRLAQLDPTATFDPPTPILTHHASEKAARDFVRPGPDVIRTGTSGIDFINWVTAWMGSEGLQTGTGELPYAGYEGTQFPPSKRNSTWIDPLPYKSTYNVFFPELRRPVEFDYDGKAKMVRRTVETYRFLSAKDAFAATADNSRDFGLSVDGIQPLDAVFGYPSFGSYPHFWAANVTGVLQNVDGLHPDETKHRSFYDIEPNTGRVMFSGRRAMISIAVDSMNIGVQSSLREGVTVIPGYWIEVATYTPDPALDAFRAGLTLSLLASARRATLGTSQDAALSANKTLAAVALMPGDGTVPVDPDFAAPLLAQVDGLSLLENARYRVCFRARVGTVESNFVYACSNGITVDTTPPRAGIVCDGTLQCRSAADDLEFQPSVTELLASWVGFDDREEGTGAHVTGISMYEWCAGTSPGGVDLFPFRSVGIATSAVASQFAGEFSRPPANGANMYVTVRAMDFVGLFVVVSSDGIILDSTPPLPVTVKLASITGSYITNQAEARIVWDGISDPESGIRTVEWAVGQKEGHADVVPFTLADSLEGVTADSLGDELKSGHSYYVTVRATNFAGLHTIVVAGPVVFDTTAPLLGVVEDGPTGTDDLSYQTVRSALTVHWHGFADFESDISRYEVAVGSISNEANLHMFVEVPKTGSGAFATEYTQTGMRLVDGHIYFSIVRACNFAGLCSSLSSNGVIVDGSAPVRGRVLDGFDGPDLVYQAEGNLIAAHWYGFHDPHSSINRYEWCAHQVAAGAPVVCMPTFQFRSVGLSTSVMDTEIDLDQNAVYRIIVRAYNRAEMYVEGVSNGVRIDETPPVQGSVTHLPLYASQPGFQVMRSVIYGRWDGFVDNESLVREYAWYARPLNHSLLATTATQRGHMGTDPMSRTYVGVQTNGAISLVGMHTGEIYHLLVEAVNGAESGSGIVASPKFIVDATPPIAGWVEHSFPTSNMRVTWGGFLDAESDIYKYTVLVGTRLYGNDIFYQDVNGTTVDIPATNAGTTYSVAVIATNSAGVKHAQPVVSRVRTLPTIVPTTAGSCSSTRTPTLTNVVKDGPGATDTDYQTYNCTAGGSYDFTAACLAGTVDCTKIVRFEWSVRSQSGTPGDVLCGEFRYAGPGHLKTGSFFASILPPGYDISATSRCTGAFIFAESAMYITQVRAVMTDGTCVMAESNGVTIAARPPTVVTIGGMRVLDGPVDGVDIDYQQKTDRIDASWKGAFDAPTPGIARYEWAVGVSPLADQVMKFTPLPSVPTAATASALVLAVGTHYYVSVRAYAINGLTIERASDGVLVDNTVPMEGIVLDGLGPYDLAYTLNDTTVSATWHGFEGMFSPIVKYEVGLGGDTIPELIPFVDVALQTNVTFDVVKLAGRALVTSFVYHFYVRATNAVGLVSAAAKSDGISIDKDGPTGGIVWWALGKGQACGWSDSRSSGGVPCVQGDGTSVSIEWTGFVDLQSGIDRYAWAIGTGEWLECVCAMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSSATVLGLALNHKALVFATLAAYNPVGLMTVVKTQSLLIDETPPVVTCAVIDGPSAADIAYQNTTTIQASWPCFADAESGISGYSWGIGYEPGQTTVLPLSSVGMSTTGSFALPPDARPPKGFLRRYFVTVVARNYVGMSLAAYSDGVIVANVDPVKGRVVALGAEGPALFTARTDSLLFRVDGFEDQDAGLLSYEYLLRRSLGVEEVLGVNETDFVASGSVSAGFDYVSVSSLSLVSGFRYEMTVLATSKSGRQSGTSSAAVTVDTSPPLFIGNAQFCWESQTMVVVAWYVEDPESDVRSEFALGRTPSLNSILDFTSADLELDDRIACVRTVSDLPTSIRNCRFFGWSRKNNFCVYNPKPGFDVAINAANNYILQLRATNGAGLVSTQRAKIFT* # ORIGINAL: g5340.t1 original gene structure, not modified by PASA NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS gene 7444 15356 . + . ID=g5340;Name=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS mRNA 7444 15356 . + . ID=g5340.t1;Parent=g5340;Name=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 7444 7522 . + . ID=g5340.t1.exon1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 7444 7522 . + 0 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 7829 8118 . + . ID=g5340.t1.exon2;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 7829 8118 . + 2 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 8387 8567 . + . ID=g5340.t1.exon3;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 8387 8567 . + 0 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 9101 9271 . + . ID=g5340.t1.exon4;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 9101 9271 . + 2 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 9876 10760 . + . ID=g5340.t1.exon5;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 9876 10760 . + 2 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 11073 11174 . + . ID=g5340.t1.exon6;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 11073 11174 . + 2 ID=cds.g5340.t1;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 11692 15356 . + . ID=g5340.t1.exon7;Parent=g5340.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 11692 15356 . + 2 ID=cds.g5340.t1;Parent=g5340.t1 #PROT g5340.t1 g5340 MASSLVIGALIVLSLANGSAFATSDNDAPYIFGGSLSLRCLTRKDISGGVVSKPTEAADHLSFECRSLYGDNAGFLSCTGRYVLEASAADPELRSALLAYKFGQSIDDADYIGVRIAKNGNVTVALSKDESMTDVVNAILDHEGPQVQVDPAIGFGPTFSMSTTDMASITCKVSIQPFYILRPRDCKYSAWSQYSECTQPCGNGTQTRTRTVELPALATGTPCDDDLLIEVEPCNTQRCPNVFSAGNGGAITVGAVDSSSISINWTASFNSDIDLPLDKTQIVYSVFLSNNGNNISTPTKARSAGTVATVLTGVTAYTITGLTSVATYTINVIAKAPGANGNESEAAYVPVDATLPTCAIQVTPVDPLARIFLAPSAAIDEKSAGTVGTVVGSLFAIDGDDANVPSTYTILSSIPDGAFTLDGTTLKTAAALNFADHATSLRVRLRTNSTNGNASREDTFSPYIRRDCSEVAPVPERTRVSNDMPISVYEAQCTKFNLAFDRNIAADETLSWKWATSSETIVGCETYSDASCTTPGAGPTVYIRCSAYLSALALLGLAPRLQFSQTGEAVAPLYIRATVGGEHTCSDPMVVAPNSELVASRFTLAESDGRPGATNTLSVSLDPSDDLVAGATVTIRNLVGTGTMDSASLALGSTDAALFGGSGVWSQSAGMLALTVATSKIVPKGTLSVFTFQVTNPAATKSSVRPEVSLGGNLWVPCASPVLGADDGFTVASADTPTDIDFTDSSRLSIVLRPRATLLPGTLVIIDGLLDSSLEDATMVPLLDHPSGPSFGRIFFGMNALSWTKSTGTLVLELLPLLPLGPTTVLAFSIAMAPVAAPKAAATPSIHINLRAAFNVTGVSFAVPSQFVRIISVTESTNVGFAQSTLTLTCGIGLPISSGSFVDIIGLVGTGTGDGSLLLQGPDANLFGDVGVWTKAGGVLTLVFIEEVNTTFSISFKLNLPQPFVSPLRPRARLDGVTNPVVLSDKTMLGTFGGAFLLGTYETSRVPSAPNTLTLVIRFTSNMKAGTELKIALTPDEEVLLLTPDNPALPLKGVSAAVFGGAGVWKQSTGELTLTVAPGFVTQSTTPSLISFEITNRETAGAPLINGVAQLAGDTPTLLNTIVNSTEAGFASLSADETGAFEEFTISESSSTPSLPSTITVSFRPPSDITAGTAIKIGKLMNVATPNTPSLQIGGSGAEIFGSVAAWASGTLTLTVAAGKVVPSASTTTITFTLTYSDGSVPPLIKYKIGVNDEKGGAGGPINLGDGGFATRTVSESMSADLTTRILKFTLRPRRDLYATETITIAGLVGTLTEDNESLPVWGASGAAVLWKGAWTKATGTLFLTIGPGKYLSNAATGVDTEFYVQLSTPFDIAVVKPTISHNGMGAEALDDTFRSIATITRAVITESTILGGATNDITVGIRPSLPVAAGNTIVVTGLTSSKTASNAAFVVRGLHATAFGSTAAWIGTGTLTLTVAPGRTLPSTSSTYVTFTLTNGEGSRAPVQISTKVNSNAATNTDKRILSYSAGFSVTEARESTTVPSALNTITFKMRPTETLKAGRVMTISNLNGLLKPVNQTAVVAIGGSAANIFGGTGLFSEAGSTLTLTVAAGQALLDCTTTVLTVSLRNGASPRSASQPRFQIANSTVLTTSTTPGILAFNGGFSALTVTESTRGANSSNTLTFTLVARASIAAGKKIFIEGLTGTATADGTLSITSTSSLLLATGVFLRTSGRLSLTVGSTAVGAGAPGLTVSVTVINGAVQQVSPVIAVRIGDDSAAETFSGSVLTFAP* # ORIGINAL: g5341.t1 original gene structure, not modified by PASA NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS gene 15902 16962 . - . ID=g5341;Name=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS mRNA 15902 16962 . - . ID=g5341.t1;Parent=g5341;Name=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 16855 16962 . - . ID=g5341.t1.exon1;Parent=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 16855 16962 . - 0 ID=cds.g5341.t1;Parent=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 16410 16559 . - . ID=g5341.t1.exon2;Parent=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 16410 16559 . - 0 ID=cds.g5341.t1;Parent=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS exon 15902 16075 . - . ID=g5341.t1.exon3;Parent=g5341.t1 NODE_808_length_17467_cov_270.18_ribosomal AUGUSTUS CDS 15902 16075 . - 0 ID=cds.g5341.t1;Parent=g5341.t1 #PROT g5341.t1 g5341 MGFGLPAAIGAKVACPDKIVVDIDGDASFCMTGMELLTAAQYKIGVKVLILNNNFQGMVKQWQDLFYAKRYSQTEMYNPKFAVMAESMGVRGLQVSREEDLPRIMEEFLSHDGPVLLDATVEKDEHVYPMVPAGKALDEMVFS* # ORIGINAL: g11902.t1 original gene structure, not modified by PASA NODE_2965_length_4631_cov_37.734 AUGUSTUS gene 118 3302 . - . ID=g11902;Name=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS mRNA 118 3302 . - . ID=g11902.t1;Parent=g11902;Name=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS exon 3123 3302 . - . ID=g11902.t1.exon1;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS CDS 3123 3302 . - 0 ID=cds.g11902.t1;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS exon 1117 2769 . - . ID=g11902.t1.exon2;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS CDS 1117 2769 . - 0 ID=cds.g11902.t1;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS exon 580 902 . - . ID=g11902.t1.exon3;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS CDS 580 902 . - 0 ID=cds.g11902.t1;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS exon 118 291 . - . ID=g11902.t1.exon4;Parent=g11902.t1 NODE_2965_length_4631_cov_37.734 AUGUSTUS CDS 118 291 . - 1 ID=cds.g11902.t1;Parent=g11902.t1 #PROT g11902.t1 g11902 MSADNLHMHYGNDIRADVMRNANDAWVERVASVASTMSGASSIYTSFEHRHYGGGHAFSTAAHARRTSILELPEGQADNSGFNNDISPLPAPDAFSNGPFAPSNTAPDHVISPDGAVSVEMPPSGPSSSSLSASRTRGGVIVGNAGSISGGPSIGVLPNGAIGRNVASGRVSHTNRVILVNIIVLYCNALFAAVLAVVYVRIYVSVPWIESTPGAPVPVNSTGMTSLQPGRIHWNPFTRYVLARLFFALLGHLAIFLCGCVSFPSLKAKMWRRCWPWALASLVTISCLFAANAWNVWTLVLVFPPFVLQLWDMLRHACSGRIAPRVNLKLAGVIDVNKGQQVDGNASESAGAAGKGSIQDTDPVQQISIIVDNDGSSHASPTHVTAPMSRTTTAAPLSPRTLRSSREEQPPHSPATSRMRAPPPSVDRRRTRKESDALFSAGATFPYLSLGRLSIDHVSVTSPSDDQVHSDKKDGVRPSSGNGADSTDNQTTPDASRGINSHGALSGAKLGANLISRSFFSWRSNEDPAVLTVTARAAIASVLFGMYALAIVHFALADGRFAILLACRVLLHPFVEFGLEGFISSGVRDGLPHLSAPQAFVYWYWVTLFTAMIGQLLMFQSTSFREAVTLNLATGVLDFAYRRSYFLRIAVQHSMGESIGVLASRGRRSSPLAPFLARVVEQMSPAMRTLRELEFHASNVNVRTLVRIQASIAGLVLTKSLGSLAACYDFNGDRRDSVDIVNLLLMLAIGLLVDFYCASWEQTCGIDVIGEMKRRP # PASA_UPDATE: g6284.t1, single gene model update, valid-1, status:[pasa:asmbl_5651,status:12],[pasa:asmbl_5652,status:12], valid-1 NODE_3161_length_4146_cov_39.944 . gene 154 1800 . + . ID=g6284;Name=g6284.t1 NODE_3161_length_4146_cov_39.944 . mRNA 154 1800 . + . ID=g6284.t1;Parent=g6284;Name=g6284.t1 NODE_3161_length_4146_cov_39.944 . exon 154 507 . + . ID=g6284.t1.exon1;Parent=g6284.t1 NODE_3161_length_4146_cov_39.944 . CDS 154 507 . + 0 ID=cds.g6284.t1;Parent=g6284.t1 NODE_3161_length_4146_cov_39.944 . exon 702 1800 . + . ID=g6284.t1.exon2;Parent=g6284.t1 NODE_3161_length_4146_cov_39.944 . CDS 702 1706 . + 0 ID=cds.g6284.t1;Parent=g6284.t1 NODE_3161_length_4146_cov_39.944 . three_prime_UTR 1707 1800 . + . ID=g6284.t1.utr3p1;Parent=g6284.t1 #PROT g6284.t1 g6284 MCDCGNRHTTKMMNWRRTPVRLAVVALVVILTVLNNNGIAHAASVAGEGLTTGDHESQSGGTADAADSVGINLQSLTPTEGRTGGRVRNAAVEGADVDVDSAVIAASTLARRDTAANYPQCTTLQDHLTSYQALIQDIEADIDAAVVVAQDIVNINDEVTSAEENVCGLMHALTGIIDLSKVLGKLPYVGEVIVAISTAASAVLPLSKTMCSALGDLESIVKQPAEAAGEIVDGADSIKEKLDVISDYCGTAITLVDRAELVGSQICSLPLDAGCGSVVTALAASEAVVTDAAQKIQAVIAAAPEVSNLASTVSSLSKKANDVLQPLQDVISVFNTLTPYLDYIPSCTPAVPSECENVPYPCGVTWPCCGKLFGRCVCKYPNPKICYSNVCTPYIPPICTPSLDKLLQSLGISVPGLPGLDFLNIDVPDFPTIGFPESLLTLSIGLPTCVLG* # ORIGINAL: g721.t1 original gene structure, not modified by PASA NODE_3423_length_3504_cov_39.2068 AUGUSTUS gene 760 3422 . - . ID=g721;Name=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS mRNA 760 3422 . - . ID=g721.t1;Parent=g721;Name=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS exon 2272 3422 . - . ID=g721.t1.exon1;Parent=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS CDS 2272 3422 . - 1 ID=cds.g721.t1;Parent=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS exon 926 1923 . - . ID=g721.t1.exon2;Parent=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS CDS 926 1923 . - 2 ID=cds.g721.t1;Parent=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS exon 760 810 . - . ID=g721.t1.exon3;Parent=g721.t1 NODE_3423_length_3504_cov_39.2068 AUGUSTUS CDS 760 810 . - 0 ID=cds.g721.t1;Parent=g721.t1 #PROT g721.t1 g721 YFVLYRTADSLDWRIHTVTCDASDGNVTIDGLSPSTAYLFCVGTESDGGDRRLESAPTDLAWTDGVPADLPDSPSVDGVGQSHISVRVGRLAGATVHIDGFEVEAWESASVSNGNGVASSTCRISFQVGETAAGGVLEGLSPGVAYRVRCAAFNAHGTGPHGLFGETQCTWAAPPPPAVVSVAIYAQPGNADGDAPARAAMVTWSPPAAPSEGANEVTLLVAGYLVEVSADDGNTWTPVGSATRGRGACFASLPIESGATGTLAFRVSSVNSVGTGRPSGAVTIDAASPATMSLCELHPPDLSDVRPATDDGDNSWESGMARQLVAGVLWRMGCGKVAEEVDAEVAAQSAAATALASIRRWIASAPPTPSGVKSLGASGRFLMSSSTGSAGGPQPPREPLLSTDYPPQVTWDDEDNLGRDIASYIVRRSDAVEFSTVRCSFDPHSVDMRVGIAYTFRIAAVDSLGRVGAFSGPGAVVTALPSASLDVESRCSVHGTALLSAASVLSQQMRLSIDACHDAELFLCRVPHVSAAAAAMMRAAALYAEACHAGTEEASNVAHVTALAAASQAFRQAVGEHMTSLQRGEEGDHVTADALTASGAALTRLADALAFAVGGGSKWSGRYTVLKRVGASWVDGGEAEIGVVGGRAFFVWEGIARASPRLDGGEASVSTGSETLVWAGDVPGSVTLCDDEAVASGGEGLPTEYRFGFRFMGRVTNSTGASIEVAGVRVDS* # ORIGINAL: g7555.t1 original gene structure, not modified by PASA NODE_2517_length_6030_cov_41.975 AUGUSTUS gene 5265 5883 . - . ID=g7555;Name=g7555.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS mRNA 5265 5883 . - . ID=g7555.t1;Parent=g7555;Name=g7555.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS exon 5697 5883 . - . ID=g7555.t1.exon1;Parent=g7555.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS CDS 5697 5883 . - 0 ID=cds.g7555.t1;Parent=g7555.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS exon 5265 5350 . - . ID=g7555.t1.exon2;Parent=g7555.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS CDS 5265 5350 . - 2 ID=cds.g7555.t1;Parent=g7555.t1 #PROT g7555.t1 g7555 MGRALETYLDLTSLSLSLTRFLFRMLQLGNNKRLSVRDFKGRWFVDIREFYDANGEMKPGKKGIALGLDQWKKLRSFVDKIDAEVAKHSK* # ORIGINAL: g7554.t1 original gene structure, not modified by PASA NODE_2517_length_6030_cov_41.975 AUGUSTUS gene 3716 5092 . + . ID=g7554;Name=g7554.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS mRNA 3716 5092 . + . ID=g7554.t1;Parent=g7554;Name=g7554.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS exon 3716 4606 . + . ID=g7554.t1.exon1;Parent=g7554.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS CDS 3716 4606 . + 0 ID=cds.g7554.t1;Parent=g7554.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS exon 4775 5092 . + . ID=g7554.t1.exon2;Parent=g7554.t1 NODE_2517_length_6030_cov_41.975 AUGUSTUS CDS 4775 5092 . + 0 ID=cds.g7554.t1;Parent=g7554.t1 #PROT g7554.t1 g7554 MNDTIVPRQVVIVSLVFVLPYLRLSTLLEIAWQTDKASTRTDPSLYGTRGVLDHVQYTHSAQAEEAQLRKMPVEVHFASAALLRHTYPGAIERWTSDAPACRRSLDDCSCRVTVDDGESAGTSADVVVFDRALLIHAPRHVRRLHPRQLVYVLWHEQFGGARGLHEARSAILSGSYDGLASFRLDSEMPIPYGCNAVTRMLASWDSHVGRAAAKANSRRPGLIAAFISNCEEERMRVLDELSAHVHIDNYGGCRHNVNRPPDRSNASWETSKVDTLRRYKFAIAFENAVETDYVTEKVWDALSAGAIPVYLGAPNIADHVPGASSIINIADFKSMADVAAHILSASTDMDKLALHFQWDRQAMTRYAEAYCMEPFVCRMCRAACDRQAQPKHNSTKAAESDS* # PASA_UPDATE: g7553.t1, single gene model update, valid-1, status:[pasa:asmbl_4482,status:12],[pasa:asmbl_4483,status:12], valid-1 NODE_2517_length_6030_cov_41.975 . gene 221 2244 . + . ID=g7553;Name=g7553.t1 NODE_2517_length_6030_cov_41.975 . mRNA 221 2244 . + . ID=g7553.t1;Parent=g7553;Name=g7553.t1 NODE_2517_length_6030_cov_41.975 . five_prime_UTR 221 473 . + . ID=g7553.t1.utr5p1;Parent=g7553.t1 NODE_2517_length_6030_cov_41.975 . exon 221 2244 . + . ID=g7553.t1.exon1;Parent=g7553.t1 NODE_2517_length_6030_cov_41.975 . CDS 474 2072 . + 0 ID=cds.g7553.t1;Parent=g7553.t1 NODE_2517_length_6030_cov_41.975 . three_prime_UTR 2073 2244 . + . ID=g7553.t1.utr3p1;Parent=g7553.t1 #PROT g7553.t1 g7553 MRLTDVFSAAIRRLSLRNAEKAGAQKQTLPQPTQTPPQFLPAQSASSTALPHTRAPVPAPVAGASGALAAPVLYGPRSADAVSSIANSATALVHSVVSSVALQQQQQQQQQPQQQQQHQQQQQQQMQMQPSGAPSVQSLLPVSQATAGVASDVNHPGVAADVSSGVTPAAAPPPQKAKKIPKLAKAPPQQTNTQPAQSQQQQQQQLQHHHHHEQQQQQQQLIQQQQQQYPADYIQRSTLRGVQHLQHDSGYAMHVMPPGNSGQYGGQIQSINGHYPRQSGVSGRPRSPLQEGVPRGGDSRMYGDRWRDYAPEYYQGGYGDYRGGHPGYGQQSQAWRDWEAPTHGRGVYPQQQAPLQQQQQQQQQQQQHMQLPSGQGDTVSGARDDPHAYAQQQDLATGAREGWGYENEYEFEYARSRQQSGQHVQGHAHPHGHGGDRVYVPRMDGTDYLPHALATHPSLGVGGVGGVEKGVPSYVHQQQQQQQYDAPSKKRPVADGYPFDHSAPPSSTHARPADGASDRNPKRPRVEDTSSR* # PASA_UPDATE: g2901.t1, single gene model update, valid-1, status:[pasa:asmbl_8508,status:12], valid-1 NODE_6197_length_620_cov_44.4422_potentialcontaminant . gene 1 596 . - . ID=g2901;Name=g2901.t1 NODE_6197_length_620_cov_44.4422_potentialcontaminant . mRNA 1 596 . - . ID=g2901.t1;Parent=g2901;Name=g2901.t1 NODE_6197_length_620_cov_44.4422_potentialcontaminant . exon 1 596 . - . ID=g2901.t1.exon1;Parent=g2901.t1 NODE_6197_length_620_cov_44.4422_potentialcontaminant . CDS 1 596 . - 0 ID=cds.g2901.t1;Parent=g2901.t1;3_prime_partial=true #PROT g2901.t1 g2901 MSSPSRLRVPGGAAAPASPTRSPGALAQRHRAYSVATPTRPLTLSSTGTATTPKTAAGGDQQGQATPATGEINRLYPHRQQQELLQKQPSARRNSISLAPGEKAGAIRSVKGLFTLVASSGRKPEAILADVHRVLKTMCLPFKETGFWTIEVTHVNASYQRVVMEIEVCKVWLLSLHGVSLRRIGGDAWLYKELCTSI # ORIGINAL: g10143.t1 original gene structure, not modified by PASA NODE_1171_length_13397_cov_43.098 AUGUSTUS gene 2069 3172 . - . ID=g10143;Name=g10143.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS mRNA 2069 3172 . - . ID=g10143.t1;Parent=g10143;Name=g10143.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 2069 3172 . - . ID=g10143.t1.exon1;Parent=g10143.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 2069 3172 . - 0 ID=cds.g10143.t1;Parent=g10143.t1 #PROT g10143.t1 g10143 MAFGLADTRAVSVSNDDIARFSARPSSGTSSRPTSSSSVRLAHLSRSSSGVTVRGSSPTTAAAAAQRHHVEDGDDTGRMSHYEVIPGIESSKRLSSPDTFDKSKRPYTSVDASASSNDRLAHHLSPPALGSTDSAYASTSSVGSDVSSHVFACSATAAIRMKSDHDESNGNMSDTSTSSAPQSYSSYPVLPNISRPRARSYPQFPESPQCPPTPCTRRRFMKTSSQESSVSGATEFGSQHELNRALAPTPTKLALHTRRWSETSMPSSLSLSSRSNSIQSDSGHVFCASPCVLEVEEEQTNVGPWLSVTSFSPSSSLESQGGDLTSSPRLSVSQRPTRRRSCGSPMCDVAARVMRLAKDNFTDEQCE* # PASA_UPDATE: g10146.t1, single gene model update, valid-1, status:[pasa:asmbl_634,status:3], valid-1 NODE_1171_length_13397_cov_43.098 . gene 9866 12593 . - . ID=g10146;Name=g10146.t1 NODE_1171_length_13397_cov_43.098 . mRNA 9866 12593 . - . ID=g10146.t1;Parent=g10146;Name=g10146.t1 NODE_1171_length_13397_cov_43.098 . five_prime_UTR 12511 12593 . - . ID=g10146.t1.utr5p1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . exon 12218 12593 . - . ID=g10146.t1.exon1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . CDS 12218 12510 . - 0 ID=cds.g10146.t1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . exon 10968 12051 . - . ID=g10146.t1.exon2;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . CDS 10968 12051 . - 1 ID=cds.g10146.t1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . exon 10617 10763 . - . ID=g10146.t1.exon3;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . CDS 10617 10763 . - 0 ID=cds.g10146.t1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . exon 9866 10356 . - . ID=g10146.t1.exon4;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . CDS 10117 10356 . - 0 ID=cds.g10146.t1;Parent=g10146.t1 NODE_1171_length_13397_cov_43.098 . three_prime_UTR 9866 10116 . - . ID=g10146.t1.utr3p1;Parent=g10146.t1 #PROT g10146.t1 g10146 MGRSRSRSASPRGGHENETPEEKRARRLAKKDAKRKKRLLELGIEDSGDNAFGDPNLLEKFVWHKKRGKEGGTEEEERHKEKHRREENKRELEKVKKRRLEREVEAAAREEERQREQRDREMAMNAEWEKKEDEFHLTQAKLRSRIRIEEGRAKPVDVLAKYIQSYDEPNEIETNEPYGIVDDLTLDDAEDLCCDIAVYLGLDTKSSDVRRFWEDMLVVSIDVRDRLRKESGTSGAAGRTVLNPAVLDDVSRIFSGKTAEQLGELEVQIKDKLGGGGAVDVSYWETLLAKLKVFMARARLRQTHQAMLVGKLANLREMQAAAAEEGDGSEHSGGEGDAADQAALREELRAHAEAQGGRGERDDGDDDADGAAARSPRLLPVDAPTDGIPVLDPAEDADHLRRQREAVVTRAGHASGVAGPVSGGAEAGPSGEDGGFAKESTKPLAADEETFNAEVPTNQTYLWMDKYKPRKPRFFNRVHTGFEWNKYNQTHYDKDNPPPKIVQGYKFNIFYPDLIEKTQTPQYFLTRDPENPEFCIVRFHAGPPYEDIAFKVVNREWEYSFKRGFRCHFERGIFQLWFHFKRYRYRK* # ORIGINAL: g10144.t1 original gene structure, not modified by PASA NODE_1171_length_13397_cov_43.098 AUGUSTUS gene 4564 8527 . - . ID=g10144;Name=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS mRNA 4564 8527 . - . ID=g10144.t1;Parent=g10144;Name=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 7374 8527 . - . ID=g10144.t1.exon1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 7374 8527 . - 0 ID=cds.g10144.t1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 7026 7155 . - . ID=g10144.t1.exon2;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 7026 7155 . - 1 ID=cds.g10144.t1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 6597 6739 . - . ID=g10144.t1.exon3;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 6597 6739 . - 0 ID=cds.g10144.t1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 5340 6441 . - . ID=g10144.t1.exon4;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 5340 6441 . - 1 ID=cds.g10144.t1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 4965 5040 . - . ID=g10144.t1.exon5;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 4965 5040 . - 0 ID=cds.g10144.t1;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 4564 4757 . - . ID=g10144.t1.exon6;Parent=g10144.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 4564 4757 . - 2 ID=cds.g10144.t1;Parent=g10144.t1 #PROT g10144.t1 g10144 MLSKGLGGGTARWAVVRALIAAPARAAYATTGIRNAFPFPTPLKSAIAVSETKHTTNVTPTARPLANTSPGGVRKGGPAKTSPSGSTRTNVVVKTPDALGSPPIEKAASTRKNTLVRTDSLASPEIEKVVSTRKRGATQTDSVDSPLVEKVASTPKKVTQTNSADFPSIAAAGSTREKKAMASNETLAHTPVAVLCESIRERGAPSVDAASPSLSSPTEPRAESTPRTCTTSTTSTTDRADRATDAAIVGEGSPHKPTASTATNTSELSSSLPSIIRSAEFAMHVSPLSASPGANRSSETNGEQSLALLRLDVDNRTVALPRFGWLLKRVVAAGRLDDAVAILRKAETEGLLELQPNTVFYTNLLDGCLKHRQEVRLWKEYYDFRARGGVPDQVMYGVLMNACAKKFNVERALALYREMIGSGLQPTDGCLNTLMKGLAVRPDYILDAFKLAASLRLYDITMSTYIVAKLLESCATCGNVGAAHAVWAHAFAGKSGLPRQPATMTKLGVVKSKQYQADSNAVGAFDGNLSFTTAIPCVGDYAILFQTYVASLPRPVRQDMRAEEDPEAILPEIMRDRKNAKVIPDLNFLLQARLDDGPVITRPVRAAALTTAISRCIKSLNGDYKPGTMPTLTQLHQMCGRRLQEMLAAGIKPSARCVDYLLELHTRTNDVDGAMPYFNMVKDVQTWRKRAYRWMIYACCRIHDGNRAMELWNEYRQKCAQSIQETVDASSNAASPFGTSGGPAATATSNAPTVTPLSSTDAAASTATAAAPAEHRPSTADTTGSALVPIPAKDLDKVIWSVMVYMHALRDDIDMALSIANELVDADILLEPYHYRHLRHKCKSLNQHIKWIDFQAKCARKELENKVTDPLELELMVADGQARTYWAKSEREPRSLRDLKQGKRHSRTKPKWMAGSTWSFAQDLETAEAVMP* # ORIGINAL: g10142.t1 original gene structure, not modified by PASA NODE_1171_length_13397_cov_43.098 AUGUSTUS gene 1 248 . - . ID=g10142;Name=g10142.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS mRNA 1 248 . - . ID=g10142.t1;Parent=g10142;Name=g10142.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS exon 1 248 . - . ID=g10142.t1.exon1;Parent=g10142.t1 NODE_1171_length_13397_cov_43.098 AUGUSTUS CDS 1 248 . - 0 ID=cds.g10142.t1;Parent=g10142.t1 #PROT g10142.t1 g10142 MDALCMEAIRTFHTPPFDFARVAEVFLGGALLGEEGADGPGACLSGVQHARACLYMWLVLRKFNAEGTASYRAADEYNREAS # PASA_UPDATE: g10145.t1, single gene model update, valid-1, status:[pasa:asmbl_640,status:12], valid-1 NODE_1171_length_13397_cov_43.098 . gene 8730 9686 . + . ID=g10145;Name=g10145.t1 NODE_1171_length_13397_cov_43.098 . mRNA 8730 9686 . + . ID=g10145.t1;Parent=g10145;Name=g10145.t1 NODE_1171_length_13397_cov_43.098 . five_prime_UTR 8730 8793 . + . ID=g10145.t1.utr5p1;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . exon 8730 8960 . + . ID=g10145.t1.exon1;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . CDS 8794 8960 . + 0 ID=cds.g10145.t1;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . exon 9190 9313 . + . ID=g10145.t1.exon2;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . CDS 9190 9313 . + 1 ID=cds.g10145.t1;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . exon 9415 9686 . + . ID=g10145.t1.exon3;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . CDS 9415 9540 . + 0 ID=cds.g10145.t1;Parent=g10145.t1 NODE_1171_length_13397_cov_43.098 . three_prime_UTR 9541 9686 . + . ID=g10145.t1.utr3p1;Parent=g10145.t1 #PROT g10145.t1 g10145 MLSVAARCAASLRVVSVRGGARAYATSANILDVTDSSYDAEVLKSTVPVLVDFHADWCGPCRMLGPTLEKVTQEMAGAIKLAKINVDDNSEIAGGHNVTGIPHVMFVANGKVTGTFTGLKSEGEVRQFIDVHLRKASQ* # ORIGINAL: g5475.t1 original gene structure, not modified by PASA NODE_1160_length_13461_cov_49.3885 AUGUSTUS gene 8568 10167 . - . ID=g5475;Name=g5475.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS mRNA 8568 10167 . - . ID=g5475.t1;Parent=g5475;Name=g5475.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 10067 10167 . - . ID=g5475.t1.exon1;Parent=g5475.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 10067 10167 . - 0 ID=cds.g5475.t1;Parent=g5475.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 8568 9816 . - . ID=g5475.t1.exon2;Parent=g5475.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 8568 9816 . - 1 ID=cds.g5475.t1;Parent=g5475.t1 #PROT g5475.t1 g5475 MASDGAGGTIFVMVALCMGLFAIAYQSGSLFYTALTPASKLELVVKQSVLEQTEALSDFFENYVNWQHENERAMKRGAPVVKPFKALLIGDSGTGKTLFVEQLQNNIGPTATVYAKSAAGLLGEDTSSIISDIEKCAANSGGCLVVIDNMELLPQVRRNDVTSGWFGFLRGPFSGYPIKGGSRDGVVKFGKTVFIFVVNLEGPVRSILAERNKFSGRTVTAQNYQQLRAAVNRDLAFTNLCERAFGTGGSELVKFFDAIPIFLQFDFQSMLIILRNSLKDHFDGYQERYPHMQGRPKFTPLVVEALAADHDVEYTSITDVNSGKTTNVSTYGAMPIGKFILVKVERCFHYCAANGGCAAPEPDPPMRTTADQEMRSGGGQQPQWRLGVVHFDMTTNRQAGGGSGGKFDVTCTWDRSTPNGASLSGYAVTSCYTNTHLDECGRHGARRKV* # ORIGINAL: g5473.t1 original gene structure, not modified by PASA NODE_1160_length_13461_cov_49.3885 AUGUSTUS gene 4312 4668 . - . ID=g5473;Name=g5473.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS mRNA 4312 4668 . - . ID=g5473.t1;Parent=g5473;Name=g5473.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 4312 4668 . - . ID=g5473.t1.exon1;Parent=g5473.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 4312 4668 . - 0 ID=cds.g5473.t1;Parent=g5473.t1 #PROT g5473.t1 g5473 MSKLRRSFDSESSTSHDAINTAALYNNDECPFKTKTQLVAYMQASSLYKEWRVHAVSSKGDDCVEARTRRDLLLRKFHPDTLSQAYPDCNPLLAVDVIEIIAVLSAEDDVRCQRKTTS* # PASA_UPDATE: g5472.t1, single gene model update, valid-1, status:[pasa:asmbl_607,status:3], valid-1 NODE_1160_length_13461_cov_49.3885 . gene 1708 4012 . - . ID=g5472;Name=g5472.t1 NODE_1160_length_13461_cov_49.3885 . mRNA 1708 4012 . - . ID=g5472.t1;Parent=g5472;Name=g5472.t1 NODE_1160_length_13461_cov_49.3885 . five_prime_UTR 3820 4012 . - . ID=g5472.t1.utr5p1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 3680 4012 . - . ID=g5472.t1.exon1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 3680 3819 . - 0 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 3389 3485 . - . ID=g5472.t1.exon2;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 3389 3485 . - 1 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 3147 3227 . - . ID=g5472.t1.exon3;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 3147 3227 . - 0 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 2842 2939 . - . ID=g5472.t1.exon4;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 2842 2939 . - 0 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 2384 2495 . - . ID=g5472.t1.exon5;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 2384 2495 . - 1 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . exon 1708 2086 . - . ID=g5472.t1.exon6;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . CDS 1982 2086 . - 0 ID=cds.g5472.t1;Parent=g5472.t1 NODE_1160_length_13461_cov_49.3885 . three_prime_UTR 1708 1981 . - . ID=g5472.t1.utr3p1;Parent=g5472.t1 #PROT g5472.t1 g5472 MAGTQRHGKELMRKSEKLLADPNTEPLELLRASCLARGASGIKGLGRIFRIMDDDGSKSLDYNEFKKGLQDYGVYVDDAAVRKLFKEFDENGDGRLNFDEFLKKLRPPMNQFRLKLIQTAFRKLDKTGDGQITVDDLRGVYSVNFHPKFKSGEWTEDQVLRQFLDSFDTPDHPDGIITFEEFVNYYSGVSASIDEDIYFDLMMRQAWKIK* # ORIGINAL: g5474.t1 original gene structure, not modified by PASA NODE_1160_length_13461_cov_49.3885 AUGUSTUS gene 5175 5823 . + . ID=g5474;Name=g5474.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS mRNA 5175 5823 . + . ID=g5474.t1;Parent=g5474;Name=g5474.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 5175 5685 . + . ID=g5474.t1.exon1;Parent=g5474.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 5175 5685 . + 0 ID=cds.g5474.t1;Parent=g5474.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 5786 5823 . + . ID=g5474.t1.exon2;Parent=g5474.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 5786 5823 . + 2 ID=cds.g5474.t1;Parent=g5474.t1 #PROT g5474.t1 g5474 MAYTHPVYPCEKFPPGMSGIFQRRPRCRSPHDRSLAPPYRRVGIRCVVGIVCTSIARAGCLRDGTSPGRTVCTVHRHPSPRFPVGMDLAAPWLRAGTVFVGDTDGTGVGCAPKWYFSSAFQSRMPGTSLHRQAHAFQVNTEPQLSYLCLGTRGLGGTCGTMTRQFSCLYCGRVHRAHFARNR* # PASA_UPDATE: g5471.t1, single gene model update, valid-1, status:[pasa:asmbl_605,status:12], valid-1 NODE_1160_length_13461_cov_49.3885 . gene 225 1565 . + . ID=g5471;Name=g5471.t1 NODE_1160_length_13461_cov_49.3885 . mRNA 225 1565 . + . ID=g5471.t1;Parent=g5471;Name=g5471.t1 NODE_1160_length_13461_cov_49.3885 . five_prime_UTR 225 262 . + . ID=g5471.t1.utr5p1;Parent=g5471.t1 NODE_1160_length_13461_cov_49.3885 . exon 225 1049 . + . ID=g5471.t1.exon1;Parent=g5471.t1 NODE_1160_length_13461_cov_49.3885 . CDS 263 1049 . + 0 ID=cds.g5471.t1;Parent=g5471.t1 NODE_1160_length_13461_cov_49.3885 . exon 1189 1565 . + . ID=g5471.t1.exon2;Parent=g5471.t1 NODE_1160_length_13461_cov_49.3885 . CDS 1189 1466 . + 2 ID=cds.g5471.t1;Parent=g5471.t1 NODE_1160_length_13461_cov_49.3885 . three_prime_UTR 1467 1565 . + . ID=g5471.t1.utr3p1;Parent=g5471.t1 #PROT g5471.t1 g5471 MKAAFVLALAVVALMAPSVWSVSVEDFDENPHHKAMRRASDGATVNWGYETDLEHNIYGPELWGQLEGSVCGSGKATERQTPIDVKDARFDAALVQYPLHIEIGRAGPNVGKTVTNNGHSVQIDFDVTTSPVVGTLTGGPLVGEPRRLRQLHFHWGQEETPAAAAVHGSEHAIKGKFAAAELHLVHWNTKYATVTDAADKSDGLSVVGILIDEGEQENWVFSELGNRLAELVAVGNKVSINDADIDLSVLLPANTKDYYTYGGSLTTPPCYESVTWVLLKERITMTSRTLNLLRAVLNNEGVTGHNFRPIQPINGRDVRQSFETTDMDNWREAYNEWQGAFAEWKASAGSCGNQ* # ORIGINAL: g5476.t1 original gene structure, not modified by PASA NODE_1160_length_13461_cov_49.3885 AUGUSTUS gene 11008 12713 . + . ID=g5476;Name=g5476.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS mRNA 11008 12713 . + . ID=g5476.t1;Parent=g5476;Name=g5476.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 11008 12049 . + . ID=g5476.t1.exon1;Parent=g5476.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 11008 12049 . + 0 ID=cds.g5476.t1;Parent=g5476.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS exon 12235 12713 . + . ID=g5476.t1.exon2;Parent=g5476.t1 NODE_1160_length_13461_cov_49.3885 AUGUSTUS CDS 12235 12713 . + 2 ID=cds.g5476.t1;Parent=g5476.t1 #PROT g5476.t1 g5476 MDSAASYPGSATDRPAGQKTTDDRVSLRAVKVVRVILMLALCGPSGVSTIQRKSPTFLDCFPQEIDVALGESSAQLYDSAESVNVAWNSFFGVLDATKGSTCGNRRSPMVVVVVESQLSGPRAESAGQIPEKASGQASSPLPLAMAKFTSFLASRVTDPKAAPVLVCGTPFDAQPSHSNSGPRYADSPRSSSQLLNVTDIRGIQKAITKMGTRPKVLRLRWTAECFKPFADRHTGELIPKYWLNPLIELWEKPLDPHLRKMYSNVAYIVELDASVFGSDQLQANAVLKTGFPSAFRRLFEEASGGSREGGTAESVLKRIQNVVWIRRHENDADTHTADSDCFTFVVDESTGSWWGVLTTPLADSVEWSSALFVTVALVACILLHFTLGRLALPKVGDTKLNGSCSGRESTSHLPAGIAGSAEPGPKALTSAVADNSGDVGESGNGNSDTSIPTPLGQPAGCKAGSMTRPEMPAVDVGADSPAAGTAGVTAAGPAELADQFKGLDLQ* # PASA_UPDATE: g10561.t1, single gene model update, valid-1, status:[pasa:asmbl_3282,status:12], valid-1 NODE_2016_length_8089_cov_85.089 . gene 289 1096 . + . ID=g10561;Name=g10561.t1 NODE_2016_length_8089_cov_85.089 . mRNA 289 1096 . + . ID=g10561.t1;Parent=g10561;Name=g10561.t1 NODE_2016_length_8089_cov_85.089 . exon 289 438 . + . ID=g10561.t1.exon1;Parent=g10561.t1 NODE_2016_length_8089_cov_85.089 . CDS 289 438 . + 0 ID=cds.g10561.t1;Parent=g10561.t1;5_prime_partial=true NODE_2016_length_8089_cov_85.089 . exon 704 1096 . + . ID=g10561.t1.exon2;Parent=g10561.t1 NODE_2016_length_8089_cov_85.089 . CDS 704 862 . + 0 ID=cds.g10561.t1;Parent=g10561.t1 NODE_2016_length_8089_cov_85.089 . three_prime_UTR 863 1096 . + . ID=g10561.t1.utr3p1;Parent=g10561.t1 #PROT g10561.t1 g10561 TLVLPYTIAMYVAWYARWIYKFNIKGHPLGLEETEYLTRRTLGLSEHKWKCVPEETKAEMLSRRLYLPGHLEAYKKEQEETMKERLANSARYKQYRRFMKKQ* # ORIGINAL: g10563.t1 original gene structure, not modified by PASA NODE_2016_length_8089_cov_85.089 AUGUSTUS gene 4777 8089 . - . ID=g10563;Name=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS mRNA 4777 8089 . - . ID=g10563.t1;Parent=g10563;Name=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 7342 8089 . - . ID=g10563.t1.exon1;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 7342 8089 . - 1 ID=cds.g10563.t1;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 6830 7161 . - . ID=g10563.t1.exon2;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 6830 7161 . - 0 ID=cds.g10563.t1;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 6485 6707 . - . ID=g10563.t1.exon3;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 6485 6707 . - 1 ID=cds.g10563.t1;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 5615 6059 . - . ID=g10563.t1.exon4;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 5615 6059 . - 0 ID=cds.g10563.t1;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 4777 5405 . - . ID=g10563.t1.exon5;Parent=g10563.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 4777 5405 . - 2 ID=cds.g10563.t1;Parent=g10563.t1 #PROT g10563.t1 g10563 TSQEYFASGASESKDVVAYMTFIQSVQAARSAESKCLQAQTAFWATLLQPQPDSTRLREISSVISHHITIGQAAFHTLLRVSPDSPQVCRMYSNWLGTIMGDKDKKLIYQNRATVLESSRDEDKQVVSLGGALAIFDDRVIRADNSKSAKTTNGGTKALKSSLDVDGMRDGVSAMLGLVSDEEHFGFIASANPAVARLFGYTRHDLLGQQVGNLTAMPFAENIERAALAYISSGDHAIRGTRNVFFRHKHTKPVIILPSFIEHRRMVTSSPVHSLQAFRVVVVLTLAAILSVAIAAYVVEKQQVSEFEEAFASINAAAEIRLQVVSAGYITRRLSFAMTGLRSPTVATPSIAQLSSIATSLEDGYKAITARVPKMSAQHRLLFQTPSVDFISGFTAAGQTITTRTTLGEALKTTISCVRQITLANLKGRSLGEALFLVPVFNGIETGSLSRSFSASSAFTLKEVDDQIRSMRKVYIALAVSGLTVVFALTAFVILPTVVYVERASEHTLRVFENVPRETVQKMRRKCTEKIKELQTEDENSDFNCDDDSERHVHRRGSSAVAVSKTRVRRIGLSGCISVARRNLLPLLQIAMADLKEIVQGLEIGSAVFGISPRSRVESAHAVLLDDNACVAVQSSQKGYSDCMVAGDGIFANGLNQAMLWYIRCMGELKVDPPVNRTGQYVFAAANEPQIIQMQDYEERFLQPALALSASYYTHSTENVIRESKNIVLVPLVLFVVLSIVAYFAVYARLIIALDTEMKRTRSMMLMLPEEALMQMEAYVSNLAAVRTHHV* # ORIGINAL: g10562.t1 original gene structure, not modified by PASA NODE_2016_length_8089_cov_85.089 AUGUSTUS gene 1403 3896 . - . ID=g10562;Name=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS mRNA 1403 3896 . - . ID=g10562.t1;Parent=g10562;Name=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 2502 3896 . - . ID=g10562.t1.exon1;Parent=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 2502 3896 . - 0 ID=cds.g10562.t1;Parent=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 2071 2270 . - . ID=g10562.t1.exon2;Parent=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 2071 2270 . - 0 ID=cds.g10562.t1;Parent=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS exon 1403 1883 . - . ID=g10562.t1.exon3;Parent=g10562.t1 NODE_2016_length_8089_cov_85.089 AUGUSTUS CDS 1403 1883 . - 1 ID=cds.g10562.t1;Parent=g10562.t1 #PROT g10562.t1 g10562 MLWRRKGLCIALFVAAVACAGLLATLNHPGWPATQSVAAAQPLADAIHSGPPPSDAAQAMHWRDASVPQVTPSGGEEGFGVVAVQTVDPVPLSAAQQNQTTRGLLATLERIERLYGDGIDSRGAAPVVATRIRTNDLRQYQRGFKMLGLTAVEFDALSPQMGSAAGILCLGHVAERDSECVPIDMYRGSPSRPLQRIARIYGMRHVLWRKNAFCDTMMAATEGYARPSDPRRLTPAFTPLPCFFLPRDASRFESHAKDLHASQATEGRRDEQKWIVKPANGGGGSGIKVVDGLGGVLSLCNGIRGNSNAKEIIAQPYVGTPLLIDGHKFDLRIYLVVMSVSPLRLYMYSEGLVRFASVAYDHNATDGGSKEQYLTNTSINKKVKAIDDLVWSFAHLRSHLADNGADPDVIFGRIHMHIAMAFVASEPAFRARFKDIGDNYTCAECYHFLGVDVIINSDLQPSIIEMNGLADLSDNLPAMKATLVAATLDIVFNGRHARFSPPDVLRELHGLGVGYHTDKECTDGASTVYNHTAHGGDAATDGGLVYWQCVDDADIEHIVASRNELVHLPRGGFTRIYPSHSVGSAESFTEFLDHVASRMPAATRGTRYYHPLMMALSGVWMRDGMGVRLDAGEAGTPARVKYVFPEDACTMDAAGEGAPSPNATTAGEGAWSPPPCLTGLPSVDDDRRLRH* # ORIGINAL: g9843.t1 original gene structure, not modified by PASA NODE_1051_length_14394_cov_43.5056 AUGUSTUS gene 9692 11077 . + . ID=g9843;Name=g9843.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS mRNA 9692 11077 . + . ID=g9843.t1;Parent=g9843;Name=g9843.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 9692 11077 . + . ID=g9843.t1.exon1;Parent=g9843.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 9692 11077 . + 0 ID=cds.g9843.t1;Parent=g9843.t1 #PROT g9843.t1 g9843 MTPTPLGYTADFSERAAAYPLHDPTNVNKWYGVDFTNLSSGSAVRFDERLNNHGCTDVTTEVPHYPESSDVHHLYSAGDPAYVGERSQEVPTTYVSWASLDGTDGFDAAVDFDYLSVVANLGQQLKSDVLDNCNTTASLLEHLPYVPSTMTTPVIPATHTTRSRRALKKPARLGGDDSRLSTAARGRVEKRSRIKKESHSSQSLNPVRKGKKSVSVTADYDFAPSSTSVSKRSSDRNPQVRTFDAESPEFSSEALPPVGMTRAEFLPADETHGLRVRIHCACSENILSRFRSATELQKSLKDVQARQGAIGTCNHVTEAHPATPKGLKDAADEMLEHLTGVHVSVTADRTEKCSICDIYGNVLTAFGTIGSGRASKGKRSDSKRRLGARARADHMDRMHSGVWRHICEDDGCDGCVFLKAKAEKYNHRKHMHGPKASVSVGRKQKMRLPRGRIASRNVEYA* # ORIGINAL: g9844.t1 original gene structure, not modified by PASA NODE_1051_length_14394_cov_43.5056 AUGUSTUS gene 11506 12528 . + . ID=g9844;Name=g9844.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS mRNA 11506 12528 . + . ID=g9844.t1;Parent=g9844;Name=g9844.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 11506 11547 . + . ID=g9844.t1.exon1;Parent=g9844.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 11506 11547 . + 0 ID=cds.g9844.t1;Parent=g9844.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 11737 12528 . + . ID=g9844.t1.exon2;Parent=g9844.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 11737 12528 . + 0 ID=cds.g9844.t1;Parent=g9844.t1 #PROT g9844.t1 g9844 MFGGTMLLRLPLTVTTPKTAASTSDVSDTIAAAPATTSNGNTTEDDRNDPRIVHLLNTAIRKHPREAIVSLFSLEMASIYGTHSILVASGIEFPTEFVVAFVMARAFRRIRLPLELAVAAGLTRIFPSLRKIKLTELKHAAPDIFKSFRRDNDASVAGQASASVNKPSIFRRAVDTFGVVMDKYGAAYLISARYVGATIVMSLFGAMEAGGFDAQFIVDRLAAIGVHAGTGTGAVVGTWAGAVVISSLFYPFTISCSAFLAPSIARLAANLRTIVRR* # PASA_UPDATE: g9841.t1, single gene model update, valid-1, status:[pasa:asmbl_194,status:13],[pasa:asmbl_196,status:12], valid-1 NODE_1051_length_14394_cov_43.5056 . gene 198 2599 . + . ID=g9841;Name=g9841.t1 NODE_1051_length_14394_cov_43.5056 . mRNA 198 2599 . + . ID=g9841.t1;Parent=g9841;Name=g9841.t1 NODE_1051_length_14394_cov_43.5056 . five_prime_UTR 198 198 . + . ID=g9841.t1.utr5p1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . exon 198 239 . + . ID=g9841.t1.exon1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . CDS 199 239 . + 0 ID=cds.g9841.t1;Parent=g9841.t1;5_prime_partial=true NODE_1051_length_14394_cov_43.5056 . exon 576 699 . + . ID=g9841.t1.exon2;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . CDS 576 699 . + 1 ID=cds.g9841.t1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . exon 942 1011 . + . ID=g9841.t1.exon3;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . CDS 942 1011 . + 0 ID=cds.g9841.t1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . exon 1475 1554 . + . ID=g9841.t1.exon4;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . CDS 1475 1554 . + 2 ID=cds.g9841.t1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . exon 2024 2599 . + . ID=g9841.t1.exon5;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . CDS 2024 2134 . + 0 ID=cds.g9841.t1;Parent=g9841.t1 NODE_1051_length_14394_cov_43.5056 . three_prime_UTR 2135 2599 . + . ID=g9841.t1.utr3p1;Parent=g9841.t1 #PROT g9841.t1 g9841 VGKTTSVWNSAGTWEERDVSKWAQSRLKELLAGTSFDCGEGVSGVISETTKVSGEAVITFPRGKKRIGYELDVSMKYTVTHSGGSHSGKIDIPYLCDDVDDGEFEFKVTCSSDGFRQKVHKAAVPAIKTRIEVFVEELKAK* # PASA_UPDATE: g9842.t1, single gene model update, valid-1, status:[pasa:asmbl_197,status:12], valid-1 NODE_1051_length_14394_cov_43.5056 . gene 2990 6640 . + . ID=g9842;Name=g9842.t1 NODE_1051_length_14394_cov_43.5056 . mRNA 2990 6640 . + . ID=g9842.t1;Parent=g9842;Name=g9842.t1 NODE_1051_length_14394_cov_43.5056 . five_prime_UTR 2990 3142 . + . ID=g9842.t1.utr5p1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 2990 3217 . + . ID=g9842.t1.exon1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 3143 3217 . + 0 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 3446 3524 . + . ID=g9842.t1.exon2;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 3446 3524 . + 0 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 3742 3841 . + . ID=g9842.t1.exon3;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 3742 3841 . + 2 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 4088 4200 . + . ID=g9842.t1.exon4;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 4088 4200 . + 1 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 4591 4689 . + . ID=g9842.t1.exon5;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 4591 4689 . + 2 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 4939 5030 . + . ID=g9842.t1.exon6;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 4939 5030 . + 2 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 5244 5344 . + . ID=g9842.t1.exon7;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 5244 5344 . + 0 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 5627 5714 . + . ID=g9842.t1.exon8;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 5627 5714 . + 1 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 5924 6053 . + . ID=g9842.t1.exon9;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 5924 6053 . + 0 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . exon 6342 6640 . + . ID=g9842.t1.exon10;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . CDS 6342 6439 . + 2 ID=cds.g9842.t1;Parent=g9842.t1 NODE_1051_length_14394_cov_43.5056 . three_prime_UTR 6440 6640 . + . ID=g9842.t1.utr3p1;Parent=g9842.t1 #PROT g9842.t1 g9842 MASKLKDFVLHTGAVLPAVGLGTWKSPVGKAGEAVKIALLNGYKHIDCAHIYGNEAEIGELAFGPVFSSGAVKRSDVFVTSKLWCTDHRAERVRDAVVTTLRNLKLDYLDLYLVHWPISVKPDGSFPYRDESGELQTEDISSKETWQALEKLVDEGLVKAIGTSNFSSKKLTEILEFARIKPAVNQVETHPYLQQRGLVKFCQENGIHVTAYSPLGSPDRPRRGVEDPVLLADPAIVKIAEEVGRDPGQVLIRWAAQRGTSVIPKSTTGERIISNFVVNGFELTEDQMKRIGDLERGFRYIDGAIFFKKGQSASDFWDGFPNGE* # ORIGINAL: g9845.t1 original gene structure, not modified by PASA NODE_1051_length_14394_cov_43.5056 AUGUSTUS gene 13475 14359 . + . ID=g9845;Name=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS mRNA 13475 14359 . + . ID=g9845.t1;Parent=g9845;Name=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 13475 13727 . + . ID=g9845.t1.exon1;Parent=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 13475 13727 . + 0 ID=cds.g9845.t1;Parent=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 13926 14020 . + . ID=g9845.t1.exon2;Parent=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 13926 14020 . + 2 ID=cds.g9845.t1;Parent=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS exon 14231 14359 . + . ID=g9845.t1.exon3;Parent=g9845.t1 NODE_1051_length_14394_cov_43.5056 AUGUSTUS CDS 14231 14359 . + 0 ID=cds.g9845.t1;Parent=g9845.t1 #PROT g9845.t1 g9845 MMLTIVAFLSWVLARGSRPPSKSSPSACHRQQTESTLDASTQTISSEPTGTSHEDEPSSVKEVAVVDAISGDVDVTVDDFDYGKSIVFDDGAPPKYTLPPKELFVNAADPAVMHASMLTILRDGGFEDLKRHVKTYLPLHPDPPMFVLEICALATTGR* # ORIGINAL: g14401.t1 original gene structure, not modified by PASA NODE_4104_length_2178_cov_34.4432 AUGUSTUS gene 176 2029 . - . ID=g14401;Name=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS mRNA 176 2029 . - . ID=g14401.t1;Parent=g14401;Name=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 1875 2029 . - . ID=g14401.t1.exon1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 1875 2029 . - 0 ID=cds.g14401.t1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 1289 1346 . - . ID=g14401.t1.exon2;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 1289 1346 . - 1 ID=cds.g14401.t1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 960 1038 . - . ID=g14401.t1.exon3;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 960 1038 . - 0 ID=cds.g14401.t1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 668 706 . - . ID=g14401.t1.exon4;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 668 706 . - 2 ID=cds.g14401.t1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 437 472 . - . ID=g14401.t1.exon5;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 437 472 . - 2 ID=cds.g14401.t1;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS exon 176 271 . - . ID=g14401.t1.exon6;Parent=g14401.t1 NODE_4104_length_2178_cov_34.4432 AUGUSTUS CDS 176 271 . - 2 ID=cds.g14401.t1;Parent=g14401.t1 #PROT g14401.t1 g14401 VTQIVFQSTSADTLRERKGAISNAVQRLSTEIEELTRALAACAIDSENPTRRRTSENSRKRGGDPDSKYIEIFTGLTLKNDELARLVAQMEAMDGAVDETGANVNVSLAEAKTPRRGGDKKKVYGEHIGVYTESTGRRIPFVVESCIGALERLN # PASA_UPDATE: g7396.t1, single gene model update, valid-1, status:[pasa:asmbl_3663,status:12], valid-1 NODE_2165_length_7446_cov_39.5058 . gene 220 1408 . - . ID=g7396;Name=g7396.t1 NODE_2165_length_7446_cov_39.5058 . mRNA 220 1408 . - . ID=g7396.t1;Parent=g7396;Name=g7396.t1 NODE_2165_length_7446_cov_39.5058 . five_prime_UTR 1323 1408 . - . ID=g7396.t1.utr5p1;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . exon 1290 1408 . - . ID=g7396.t1.exon1;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . CDS 1290 1322 . - 0 ID=cds.g7396.t1;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . exon 961 1113 . - . ID=g7396.t1.exon2;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . CDS 961 1113 . - 0 ID=cds.g7396.t1;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . exon 220 848 . - . ID=g7396.t1.exon3;Parent=g7396.t1 NODE_2165_length_7446_cov_39.5058 . CDS 220 848 . - 0 ID=cds.g7396.t1;Parent=g7396.t1;3_prime_partial=true #PROT g7396.t1 g7396 MLIYLEGTSFPGKTLVFACAPFQTVARAKAKILHILYELGRANFQFRLKFKGVFLKDGHVLEEYGITERSVVEVVPTDSATSSSEGLNPFRVTRAGESDVMDALRNEIDAFDRREIMLETLRTMAWLHCIVGALLFATTWWYSGIYTLSGGLLGLYGIPRFTRAGGFVGRISEARRRFVFAYGVVASGLLLSSAVMGGISIVNIGKGCTSGSGCDSRVYYSAAMYIALALILSVGAVLSFVLFWNMSLEAGDLIEPVLIKPQNVRKLIDHA # ORIGINAL: g7397.t1 original gene structure, not modified by PASA NODE_2165_length_7446_cov_39.5058 AUGUSTUS gene 3464 7064 . + . ID=g7397;Name=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS mRNA 3464 7064 . + . ID=g7397.t1;Parent=g7397;Name=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 3464 3607 . + . ID=g7397.t1.exon1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 3464 3607 . + 0 ID=cds.g7397.t1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 3911 3951 . + . ID=g7397.t1.exon2;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 3911 3951 . + 0 ID=cds.g7397.t1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 4339 4423 . + . ID=g7397.t1.exon3;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 4339 4423 . + 1 ID=cds.g7397.t1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 4758 4880 . + . ID=g7397.t1.exon4;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 4758 4880 . + 0 ID=cds.g7397.t1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 5301 5597 . + . ID=g7397.t1.exon5;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 5301 5597 . + 0 ID=cds.g7397.t1;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS exon 5958 7064 . + . ID=g7397.t1.exon6;Parent=g7397.t1 NODE_2165_length_7446_cov_39.5058 AUGUSTUS CDS 5958 7064 . + 0 ID=cds.g7397.t1;Parent=g7397.t1 #PROT g7397.t1 g7397 MKDEAEPDVSGVDDSGGGDGDSGTYVSMGPGGRVSASNLSMAACQNCRQGHRQCDGNTPCNRDTVVVVRPTQRRHVSFPNPTIAAALLPQRFEVNLQERHFDMSVFTSFCDERGVYSMFSPGYCKLLGYEEGALVGHPWHSTVHPESIPIGKQAVEDLIARGQSGDPSTSSPGLLFEALRVRRSGTSFSSTQWLTVMWRGRHIAGFVCSVLSASVRERPDKNLPQGLLTMPQKTASDGHTERSISIVPRNVGQPESYTVSNDVTQPGAGAQVKPPLSVTIGGAGHAHPAAAVVVPLTVSSLGNTSSYHLSSDGTKITPLVKLPLHPQQLQQQQQQVQQLLLHQQQQQQQQLLLQQQQQQQHHHHHVQQLLLQQQQQQQQPMSIQPPSQYFPGMGISNPTTPRNISFGNDGTGMPPLVQQNSATGPTMGQSGIGEGDGGGMHYYRPGPGSAMFNNAPLGQMGQMGQMGHVGQMGHVGQMGHVSAGQHWQGAASHPSPYMMTHASGYYSYPGVPPSPRVASGAPAVPLLAHAAPGAPGAQYASTQPDGEKRAGAATSGQALAPVAGVGTTACVTDPAVAGYVQSAGSTNEEKLRRAGYRR* # ORIGINAL: g8726.t1 original gene structure, not modified by PASA NODE_4008_length_2363_cov_37.4908 AUGUSTUS gene 155 2078 . - . ID=g8726;Name=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS mRNA 155 2078 . - . ID=g8726.t1;Parent=g8726;Name=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS exon 1949 2078 . - . ID=g8726.t1.exon1;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS CDS 1949 2078 . - 0 ID=cds.g8726.t1;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS exon 1606 1742 . - . ID=g8726.t1.exon2;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS CDS 1606 1742 . - 2 ID=cds.g8726.t1;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS exon 843 1465 . - . ID=g8726.t1.exon3;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS CDS 843 1465 . - 0 ID=cds.g8726.t1;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS exon 411 503 . - . ID=g8726.t1.exon4;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS CDS 411 503 . - 1 ID=cds.g8726.t1;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS exon 155 182 . - . ID=g8726.t1.exon5;Parent=g8726.t1 NODE_4008_length_2363_cov_37.4908 AUGUSTUS CDS 155 182 . - 1 ID=cds.g8726.t1;Parent=g8726.t1 #PROT g8726.t1 g8726 MAAVGKKRLSLNDAAFADIDISFRRPGWKFRVRCLDSGAALEKGRVVYRMYVTVSETSDPTARPRVYVCFELRNGKTTERFDLDESQNKTPFLPGQTDLFAVAYPEVEGVERMILRADGLLPGQFVAPTQVLIENTRTGRKLLFIVRSRLDAKHPEVSSEPESVYQACAAPSRFFVSVVLKRTHGCIFLHPSSRDALRSPWRVCFLTYFSPVSILNAIAQITLKTGDVRDAGMNGIVALELFGATTSSGVFTLSSAHYKFEPSKSDVFTITTKSELGALKSMRIRVESTSFFSSNKWYLDYAVVENVLTKQRTQFTCQKWLSVEEDPRFWFVLWTT* # ORIGINAL: g2759.t1 original gene structure, not modified by PASA NODE_6651_length_530_cov_89.4198_potentialcontaminant AUGUSTUS gene 10 322 . - . ID=g2759;Name=g2759.t1 NODE_6651_length_530_cov_89.4198_potentialcontaminant AUGUSTUS mRNA 10 322 . - . ID=g2759.t1;Parent=g2759;Name=g2759.t1 NODE_6651_length_530_cov_89.4198_potentialcontaminant AUGUSTUS exon 10 322 . - . ID=g2759.t1.exon1;Parent=g2759.t1 NODE_6651_length_530_cov_89.4198_potentialcontaminant AUGUSTUS CDS 10 322 . - 0 ID=cds.g2759.t1;Parent=g2759.t1 #PROT g2759.t1 g2759 MCDVGCVAVWTSVPGPCIPSPYPTAIEAMRVDSYVCQLTDARGKVIRDNVDASRCSQPRPADTHPYPCDSSISLNPKLWELVQLQREAEVKLGLQKIAVYKDGE # ORIGINAL: g12985.t1 original gene structure, not modified by PASA NODE_3553_length_3220_cov_80.9405 AUGUSTUS gene 245 2296 . - . ID=g12985;Name=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS mRNA 245 2296 . - . ID=g12985.t1;Parent=g12985;Name=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS exon 1769 2296 . - . ID=g12985.t1.exon1;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS CDS 1769 2296 . - 0 ID=cds.g12985.t1;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS exon 1222 1371 . - . ID=g12985.t1.exon2;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS CDS 1222 1371 . - 0 ID=cds.g12985.t1;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS exon 625 718 . - . ID=g12985.t1.exon3;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS CDS 625 718 . - 0 ID=cds.g12985.t1;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS exon 245 322 . - . ID=g12985.t1.exon4;Parent=g12985.t1 NODE_3553_length_3220_cov_80.9405 AUGUSTUS CDS 245 322 . - 2 ID=cds.g12985.t1;Parent=g12985.t1 #PROT g12985.t1 g12985 MPSTSALPPHDGTHGTPVRVTSGDALNLSIGSAGQRASQAHRRHQHTHHQHTPHASSGGTPRLSQSQNRRSEYHKSSAKRTSVGEEDANAPVHLANSLYRVSFDGPRASRFSVIKRDSLSLGLPVSPAHVIHPVEIANGGGGHETIGAAVNVQNGAVGPPAPEEPVLAVNAQSTDKALVGWCNDVLVASGGKPSVYHIADDLRDGVYLHAIAGAVFGSPISSPCISPCRFRFEKMTNVESVVNELRFRGITFPYQLEDVVEGDLAATKALLWLLFVNFYAFEF # PASA_UPDATE: g7341.t1, single gene model update, valid-1, status:[pasa:asmbl_7695,status:3], valid-1 NODE_489_length_22640_cov_55.02 . gene 4784 6026 . + . ID=g7341;Name=g7341.t1 NODE_489_length_22640_cov_55.02 . mRNA 4784 6026 . + . ID=g7341.t1;Parent=g7341;Name=g7341.t1 NODE_489_length_22640_cov_55.02 . five_prime_UTR 4784 4869 . + . ID=g7341.t1.utr5p1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . exon 4784 5048 . + . ID=g7341.t1.exon1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . CDS 4870 5048 . + 0 ID=cds.g7341.t1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . exon 5143 5276 . + . ID=g7341.t1.exon2;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . CDS 5143 5276 . + 1 ID=cds.g7341.t1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . exon 5449 5654 . + . ID=g7341.t1.exon3;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . CDS 5449 5654 . + 2 ID=cds.g7341.t1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . exon 5799 6026 . + . ID=g7341.t1.exon4;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . CDS 5799 5915 . + 0 ID=cds.g7341.t1;Parent=g7341.t1 NODE_489_length_22640_cov_55.02 . three_prime_UTR 5916 6026 . + . ID=g7341.t1.utr3p1;Parent=g7341.t1 #PROT g7341.t1 g7341 MDLVGSSPEFKLRSWHIFFDTRQFATPKDTKKWAKRFESNLIYFQANYVVVAAAVFAYYCLYNPLMLLALSAGFFGSFYIANNPIIRVGDRIFTRRQSVPAVVAGSLLLLFLVSGLTIFIVILISAGLVAVHATLRISSVTMSLSNLIMKWRGESPATILSQIHIDGGNEGECSSDVEEEQSAHMMREARRNNARQRQQDIRAKYSIEQKS* # ORIGINAL: g7340.t1 original gene structure, not modified by PASA NODE_489_length_22640_cov_55.02 AUGUSTUS gene 1775 3558 . + . ID=g7340;Name=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS mRNA 1775 3558 . + . ID=g7340.t1;Parent=g7340;Name=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 1775 2321 . + . ID=g7340.t1.exon1;Parent=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 1775 2321 . + 0 ID=cds.g7340.t1;Parent=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 2645 2778 . + . ID=g7340.t1.exon2;Parent=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 2645 2778 . + 2 ID=cds.g7340.t1;Parent=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 2947 3558 . + . ID=g7340.t1.exon3;Parent=g7340.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 2947 3558 . + 0 ID=cds.g7340.t1;Parent=g7340.t1 #PROT g7340.t1 g7340 MHHLNCRRAFAIELSVHKIVDDRALRGVGKVNWMDIECVEGRYLLCGGSSAGLSIVDLDGQAELPTDPLSQRVGSRSTQRGMHNGIAVLPSVAQAHRSRPDEGSDERHLYSIETVQWMHGDTGLFLTSGMDHSLKVWDTNEMRVAFDFDLASKIFHHHASPLLKTLVATATEDPKVGDPKGVGHNQPVLAVQWSPRDDQLLATGSRDNKILLWDVRNPRKVLASLDQFNGAGDSADSSTRAAHNGAVKGLCFTSDGLFLLSSGTDARLMLWDALSAKNTLVNFASTRSSTRTQMAVAALDCNPLLAFHPSANDVLCYEVHAGRKANVLRGHYHAVRACVLHPFRPELYTAGDDGKLLVWTPFGSSPTGHVETIAPAPPARNGAAPVEARAQGAPNPQVDGSRGAGAVSRQQSNDGDERIEALQDAWSDED* # ORIGINAL: g7345.t1 original gene structure, not modified by PASA NODE_489_length_22640_cov_55.02 AUGUSTUS gene 19827 22528 . - . ID=g7345;Name=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS mRNA 19827 22528 . - . ID=g7345.t1;Parent=g7345;Name=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 22184 22528 . - . ID=g7345.t1.exon1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 22184 22528 . - 0 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 21856 21920 . - . ID=g7345.t1.exon2;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 21856 21920 . - 0 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 21421 21601 . - . ID=g7345.t1.exon3;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 21421 21601 . - 1 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 21056 21162 . - . ID=g7345.t1.exon4;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 21056 21162 . - 0 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 20565 20709 . - . ID=g7345.t1.exon5;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 20565 20709 . - 1 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 20241 20398 . - . ID=g7345.t1.exon6;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 20241 20398 . - 0 ID=cds.g7345.t1;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 19827 20019 . - . ID=g7345.t1.exon7;Parent=g7345.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 19827 20019 . - 1 ID=cds.g7345.t1;Parent=g7345.t1 #PROT g7345.t1 g7345 LYDPDPEVCQKALQIVDEVSHDVACLNSLVLWQPALLHLGDAGRGILLRFLGTFRGLKYLNEADFTMKEMDRWVSSGNIHYVNQVEGLLFASLHGTRAELQTLHHHHTLSHSQTAGSHKRSNSKDFMAHMDQSTVFNLHEKGEVVLPVHYFGELAKTKDGVALIRDSGYFSTFTNALKIAPTTNDALMKLKAALWAVGHIASCDLGASLVEGTTIIKDTITMCESADILSLRGTCYYVLGLMSRSKYGQDTLRENGWESTAGADERSIGICLPVDMTRLFQLKTEEYRGSWAQFMSNDFGPAGGRSESMSEILKLIGSLSNEVLLNASRRTLKKLKDAQPELFQDVFLFAHVSRLMGLYHYHLTTRRFVAELFADLKLTSQQIRSTFDSLGVLVENE* # ORIGINAL: g7339.t1 original gene structure, not modified by PASA NODE_489_length_22640_cov_55.02 AUGUSTUS gene 291 918 . - . ID=g7339;Name=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS mRNA 291 918 . - . ID=g7339.t1;Parent=g7339;Name=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 874 918 . - . ID=g7339.t1.exon1;Parent=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 874 918 . - 0 ID=cds.g7339.t1;Parent=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 671 730 . - . ID=g7339.t1.exon2;Parent=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 671 730 . - 0 ID=cds.g7339.t1;Parent=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 291 368 . - . ID=g7339.t1.exon3;Parent=g7339.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 291 368 . - 0 ID=cds.g7339.t1;Parent=g7339.t1 #PROT g7339.t1 g7339 MLLSRTTPTAMAIGRLVHTTARALAHDAPVKTIPSAPASIKKIGVIGAGQMGIGIAQVAAQ # ORIGINAL: g7342.t1 original gene structure, not modified by PASA NODE_489_length_22640_cov_55.02 AUGUSTUS gene 6359 7687 . - . ID=g7342;Name=g7342.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS mRNA 6359 7687 . - . ID=g7342.t1;Parent=g7342;Name=g7342.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 6359 7687 . - . ID=g7342.t1.exon1;Parent=g7342.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 6359 7687 . - 0 ID=cds.g7342.t1;Parent=g7342.t1 #PROT g7342.t1 g7342 MAERRAMQKYYPPDWTPDKGSINTFVGQHPLRDRARKLNQGILIIRFELPFNIWCDGCGNHIGMGVRYNAEKKKAGMYLTTPIWSFRMKCHLCDNWFEIQTDPKNTAYNVVAGARRKNETWEAKDSETIDLKDDDEHKKRLVDDAMYRLEHGENDKKKAQEQKPRLTQLQDIQEKWKDDYDLNCVLRRKFRQERKEIQRIEEESRRIQEKAAIAIRILPEAKEDIERAAGMRYAGQLRPGFREHRHKKRLEILSQSIFDRHDAPASNGFTMTRKTKSTKGVKASASIENSADAFDGRTHRLALIERKRQIGLDHRNFRVLGVEGHLGQTDVDVAGLVQPKRRRMDDDANVCDEDHARGGVRDGYCSGDVPVATRTGSGDGGSVETDIAKRNVVAGDSSVADAGLSTRKAGTETADVRGAEGATGMRGSLASLITEYGSESDS* # ORIGINAL: g7343.t1 original gene structure, not modified by PASA NODE_489_length_22640_cov_55.02 AUGUSTUS gene 8475 13349 . + . ID=g7343;Name=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS mRNA 8475 13349 . + . ID=g7343.t1;Parent=g7343;Name=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 8475 8648 . + . ID=g7343.t1.exon1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 8475 8648 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 8842 9404 . + . ID=g7343.t1.exon2;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 8842 9404 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 9591 9752 . + . ID=g7343.t1.exon3;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 9591 9752 . + 1 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 9974 10148 . + . ID=g7343.t1.exon4;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 9974 10148 . + 1 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 10317 10752 . + . ID=g7343.t1.exon5;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 10317 10752 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 11038 11219 . + . ID=g7343.t1.exon6;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 11038 11219 . + 2 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 11433 11669 . + . ID=g7343.t1.exon7;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 11433 11669 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 11842 12043 . + . ID=g7343.t1.exon8;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 11842 12043 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 12209 12273 . + . ID=g7343.t1.exon9;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 12209 12273 . + 2 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 12429 12930 . + . ID=g7343.t1.exon10;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 12429 12930 . + 0 ID=cds.g7343.t1;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS exon 13081 13349 . + . ID=g7343.t1.exon11;Parent=g7343.t1 NODE_489_length_22640_cov_55.02 AUGUSTUS CDS 13081 13349 . + 2 ID=cds.g7343.t1;Parent=g7343.t1 #PROT g7343.t1 g7343 MVAIGSLIAAGFVAIIVAIIQHRYSNIRTSPWYVTVSVYVTWYLCCAVVVLLPMDISSTLYTNCVEMEAGIYATPSPSAASPLPSLTPTMSSSLLSTPTPTSSVYASLFADPPAGRRRRANDTTAPLPATSVIGISSSALPSPSASPSLITTSLSAAPSPTPSSLVTSVSSTDAVKGDILATTDADSSSVPSLSSAPNATAAPAPTATYTPTPAISRCEQPWTYISSDVLVLVWKVIYWSSQLLTWVILPVLQTYVDCGDFTFWQKMRTSIKENLLIYVSVGVIFGGFFIYLIAAGKLTSSSVIGIAIAASNTWGLFLLIVLMGVGLVEIPRAIFDHWRTEYRLKHEQFTASKLRAEWDDEEAEIEEVMREVNRVADRVPFHDPLRVYVDEILMKATSNGLGHLIRTQRPLGASSSAGDENKPRRVKDEDDEEMTLKKLTAIHRKVIRGCLSLKRIEAQWRTCIDEALELEDILANKASFGWRFKRSLGKQRSNICSPVLEFFERIWLVNLRPILSLLVSIALVVLSVAIIWSEVTFFSKSPTISILAIVMNEVQKLHLYLNVEVLSIIFVSYMCLCSYSTLFRIRFFNFYHLVPLQQTDDSSLCFSALFLSRLTVPLGLNFLSASHLSADSSNLSTQTAFVQIMGTQDVVAFIDKGFNVYFPMCTLLFAVTAYFHACARFLSTLGFSTYMDDSDASVEQISEGKQLVTRERRLREKQLKDPEASSENSLTSRRLGRANKDLDREDRAAARAARNQSSVDSGDRENPYDRGDRSLDRKMKGGSRFVKLRDDMDDNSSIADSIDTDRGAASGGRRGASGASSSMSASAGVEASPKGKGRGFSLGGFFSRFGIGKKSGDRDQAIELLSAVGDDESVLGGHGDDLVDHDLNVRIDVDDFVGNGRDSGSFDYGSRPAARRTRPEPASGRSTGRSGGRRAYEDDDRGSGSGSAWDRDRSYRGRDSSEDAAWDRRPAGSSRRAGGAPRNLFDDV* # PASA_UPDATE: g7344.t1, single gene model update, valid-1, status:[pasa:asmbl_7696,status:3], valid-1 NODE_489_length_22640_cov_55.02 . gene 13876 19374 . + . ID=g7344;Name=g7344.t1 NODE_489_length_22640_cov_55.02 . mRNA 13876 19374 . + . ID=g7344.t1;Parent=g7344;Name=g7344.t1 NODE_489_length_22640_cov_55.02 . five_prime_UTR 13876 14088 . + . ID=g7344.t1.utr5p1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 13876 14146 . + . ID=g7344.t1.exon1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 14089 14146 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 14261 14355 . + . ID=g7344.t1.exon2;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 14261 14355 . + 2 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 14465 14526 . + . ID=g7344.t1.exon3;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 14465 14526 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 14643 15010 . + . ID=g7344.t1.exon4;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 14643 15010 . + 1 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 15253 15329 . + . ID=g7344.t1.exon5;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 15253 15329 . + 2 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 15617 15793 . + . ID=g7344.t1.exon6;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 15617 15793 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 16085 16225 . + . ID=g7344.t1.exon7;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 16085 16225 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 16476 16601 . + . ID=g7344.t1.exon8;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 16476 16601 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 16748 16864 . + . ID=g7344.t1.exon9;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 16748 16864 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 17041 17151 . + . ID=g7344.t1.exon10;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 17041 17151 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 17502 17612 . + . ID=g7344.t1.exon11;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 17502 17612 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 17810 18058 . + . ID=g7344.t1.exon12;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 17810 18058 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 18309 18401 . + . ID=g7344.t1.exon13;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 18309 18401 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 18628 18785 . + . ID=g7344.t1.exon14;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 18628 18785 . + 0 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . exon 18973 19374 . + . ID=g7344.t1.exon15;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . CDS 18973 19048 . + 1 ID=cds.g7344.t1;Parent=g7344.t1 NODE_489_length_22640_cov_55.02 . three_prime_UTR 19049 19374 . + . ID=g7344.t1.utr3p1;Parent=g7344.t1 #PROT g7344.t1 g7344 MVIKKPLRIGSHVNIQRSDGRVHAAIVSGYRADLGSVAVEWYEGEETKGKEIDVNTILNLNTQYGPFCDDDADDISARPSTAESGVESVASAAERAEELKERKRAKYAVELEKLKQKKDEKRPEPRQERYVDDAPPVKEKEDYYVDPSHPNHGFDQLVREWRRTHPIERRLTINDPVPNPKICVCVRKRPLNKKERARQDMDVLTIHNPQTAIVHQPVTKVDLTKVLENQPFRFDIAFEEDVPNATVYHFTAKPLVAAVFEGAMATCFAYGQTGSGKTYTMGGGSSTQKGVYALAASDMFALLRSPKYKDKELSISVSFFEIYSGKVYDLLNEKKKLRVLEDGKQQVNVVGLTEVVVNSADEVHSFIKSGTAVRTSGQTSANDESSRSHAVFQMILRRKHVKKLYGKFSLIDLAGNERGADTRDSDRQTRLEGAEINKSLLALKECIRSLGRGVGHVPFRASKLTQVLRDSFIGDNSRTCMIATLSPGSSSVEHSLNTLRYADRVKELPGNQKGAPAQNENVQPNRPANAAAPAGGKKAKEPEVHRDRDYREDLQLLHRSLVNQGSFSGEGSGDVLAFHEAVAQLVEDEESLIEEHRDLLKEQRKLQDEELKLLDSVDSPEGDAAAYAQRLEEILTKKIGLATQLREKVAAFRSDIQVEEATSRNIQRLPIY* # ORIGINAL: g12537.t1 original gene structure, not modified by PASA NODE_3624_length_3098_cov_38.1501 AUGUSTUS gene 1 1210 . - . ID=g12537;Name=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS mRNA 1 1210 . - . ID=g12537.t1;Parent=g12537;Name=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS exon 1125 1210 . - . ID=g12537.t1.exon1;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS CDS 1125 1210 . - 0 ID=cds.g12537.t1;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS exon 855 968 . - . ID=g12537.t1.exon2;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS CDS 855 968 . - 1 ID=cds.g12537.t1;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS exon 390 486 . - . ID=g12537.t1.exon3;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS CDS 390 486 . - 1 ID=cds.g12537.t1;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS exon 1 92 . - . ID=g12537.t1.exon4;Parent=g12537.t1 NODE_3624_length_3098_cov_38.1501 AUGUSTUS CDS 1 92 . - 0 ID=cds.g12537.t1;Parent=g12537.t1 #PROT g12537.t1 g12537 MASSFSVLAAMIAVALLCVRSGSGELVWRALEMQGTPPAPRCDHSAVYYPNDGRIYIFGGYNESAGPYDDFFTLDVATKTWTQLNLAGDAPTKRSGAFQGIVGSRLVIGYGSVGPSFLNDLFYVDLDAQ # PASA_UPDATE: g12538.t1, single gene model update, valid-1, status:[pasa:asmbl_6321,status:12], valid-1 NODE_3624_length_3098_cov_38.1501 . gene 1849 3013 . + . ID=g12538;Name=g12538.t1 NODE_3624_length_3098_cov_38.1501 . mRNA 1849 3013 . + . ID=g12538.t1;Parent=g12538;Name=g12538.t1 NODE_3624_length_3098_cov_38.1501 . five_prime_UTR 1849 1893 . + . ID=g12538.t1.utr5p1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . exon 1849 1954 . + . ID=g12538.t1.exon1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . CDS 1894 1954 . + 0 ID=cds.g12538.t1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . exon 2081 2153 . + . ID=g12538.t1.exon2;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . CDS 2081 2153 . + 2 ID=cds.g12538.t1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . exon 2376 2443 . + . ID=g12538.t1.exon3;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . CDS 2376 2443 . + 1 ID=cds.g12538.t1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . exon 2606 2670 . + . ID=g12538.t1.exon4;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . CDS 2606 2670 . + 2 ID=cds.g12538.t1;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . exon 2915 3013 . + . ID=g12538.t1.exon5;Parent=g12538.t1 NODE_3624_length_3098_cov_38.1501 . CDS 2915 3013 . + 0 ID=cds.g12538.t1;Parent=g12538.t1 #PROT g12538.t1 g12538 MLSKVIKAHQSKTVALKEENEKKRKEVVDSASRLSNALVDRLNVGVAQVFQNQRTIENEAKQLQASTARYCKQAQQWVSLIDAFNQSLKEIGDVENWARTMENDVRIIAEALEAVNRGAFS* # PASA_UPDATE: g2723.t1, single gene model update, valid-1, status:[pasa:asmbl_8810,status:12], valid-1 NODE_6758_length_514_cov_42.7244_potentialcontaminant . gene 2 331 . + . ID=g2723;Name=g2723.t1 NODE_6758_length_514_cov_42.7244_potentialcontaminant . mRNA 2 331 . + . ID=g2723.t1;Parent=g2723;Name=g2723.t1 NODE_6758_length_514_cov_42.7244_potentialcontaminant . exon 2 331 . + . ID=g2723.t1.exon1;Parent=g2723.t1 NODE_6758_length_514_cov_42.7244_potentialcontaminant . CDS 2 331 . + 0 ID=cds.g2723.t1;Parent=g2723.t1;5_prime_partial=true #PROT g2723.t1 g2723 LTVIQMGTFKRAVIATESQLLILKVQLVREGENATRDTADMYATSLIGEAGKAIIESTVLFSSLLVAAAPGNYRVVISPSTSAYNATSVDFNLYMPLLLMACVKGKQLL* # PASA_UPDATE: g2189.t1, single gene model update, valid-1, status:[pasa:asmbl_4959,status:3], valid-1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . gene 1347 5028 . - . ID=g2189;Name=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . mRNA 1347 5028 . - . ID=g2189.t1;Parent=g2189;Name=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . five_prime_UTR 4742 5028 . - . ID=g2189.t1.utr5p1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 4543 5028 . - . ID=g2189.t1.exon1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 4543 4741 . - 0 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 4319 4372 . - . ID=g2189.t1.exon2;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 4319 4372 . - 2 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 3891 4064 . - . ID=g2189.t1.exon3;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 3891 4064 . - 2 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 3319 3472 . - . ID=g2189.t1.exon4;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 3319 3472 . - 2 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 2890 2976 . - . ID=g2189.t1.exon5;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 2890 2976 . - 1 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 2458 2713 . - . ID=g2189.t1.exon6;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 2458 2713 . - 1 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . exon 1347 2036 . - . ID=g2189.t1.exon7;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . CDS 1395 2036 . - 0 ID=cds.g2189.t1;Parent=g2189.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant . three_prime_UTR 1347 1394 . - . ID=g2189.t1.utr3p1;Parent=g2189.t1 #PROT g2189.t1 g2189 MASAEDNTIVRDENGGNTGYEPFASLTIDPPLHPWGYAAGDIISGEILVHTDAIPIHSCHFQFLGKELVMWRDEGGRLHKARRTFLSNDHPIHYADTPRGEVFLSGDIIPFAYTIPHDLPLPTINFPRESEAFGCEIYYVGKVVMLVGGDDEKPIAVEDEDLRLYLTIRAKQDAQFYHELSLRQAWVEHKKKFALHTGSVDFRVRVDRLAIVPSEPMHARVEIHNHSTTATVDSVEVLFRQRIVLQVNDSDTRTLTRNLFSRKLNIAKGGVTPNAIADLTVPIVWREDLTTHDMGFDVASKLISVSHSVVVEVHIPWARMFDIVIPIRVLPLADTAFPPMSRRNSLRSRDMVGLLQPGRGSTASPIEENGGEHGDGPTDASDSGSISSSELDMSKGWTMDGATTDDDIDEADVGRDSPSVATDEYSHVSRNASVAAESKRRADSESSDKAGMSLDEPAQLTANGDLNGVNGVDQVSGDGGDITEGDGDGDEGGVISADDDVSEADAHPTSSKGGGFVRECV* # ORIGINAL: g2188.t1 original gene structure, not modified by PASA NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS gene 97 974 . + . ID=g2188;Name=g2188.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS mRNA 97 974 . + . ID=g2188.t1;Parent=g2188;Name=g2188.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS exon 97 223 . + . ID=g2188.t1.exon1;Parent=g2188.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS CDS 97 223 . + 0 ID=cds.g2188.t1;Parent=g2188.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS exon 412 974 . + . ID=g2188.t1.exon2;Parent=g2188.t1 NODE_2764_length_5183_cov_40.1132_potentialcontaminant AUGUSTUS CDS 412 974 . + 2 ID=cds.g2188.t1;Parent=g2188.t1 #PROT g2188.t1 g2188 NDRADRHVSAPWNGYAQSKLAAEWVCQKVARDTSLPVTISRLGEITAHTTSLACNSADSFRRILKTVRTCGNAPDLNVHHLNARGVNGESVSYADMTPVDYCAAALSHYIRTEPTCFATGVPQPIVHHIANPQPITWHAAFSHALGVAELPLVPLTEWAVSGQTDDHGDVKGAAVDTKEAELARFFFAGTAQESVYRVCVGNDDTVTLAGAGILFPVLSDSYCRSAFAE* # ORIGINAL: g2666.t1 original gene structure, not modified by PASA NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS gene 10938 12503 . + . ID=g2666;Name=g2666.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS mRNA 10938 12503 . + . ID=g2666.t1;Parent=g2666;Name=g2666.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS exon 10938 12503 . + . ID=g2666.t1.exon1;Parent=g2666.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS CDS 10938 12503 . + 0 ID=cds.g2666.t1;Parent=g2666.t1 #PROT g2666.t1 g2666 MNWAAENGHLAVVQWLSANRTEGCTTDAMNLAARDGYLAVVEWLSANREEGCTTGAMNWAARNGHLDVVKWLSANREEGCSTYAMDWAAENCHLAVVEWLSTNRIGRTLTRLKGGAIHELQSSESGCTTCAMDSAARNGHLAVVVWLSVNRKEGCTTCAINWAAENGHLAIVEWLSTNRTEGCTTDAIDWAARNGHLAVVKWLSKNRTEGCTANAMDWAAENGHLVVVEWLSANRQEGCTTDAMNLAAKNGHLAVVEWLNENRTEGCTTDAMDGAASGGYLAVVEWLSANREEGCTTKAMIRAVMNGHLAVVEWLNGNRVGRAPNRPETRYTEAALDWAAMNGHLAIVEWLSANREEGCSTYAMDWTAENGHLAIVEWLSLNRTEGCTKKAMDWAARNGHLAVVKWLSVNRKEGCTTCAMDWAARNGHLAVVEWLSANREEGCTTDAINLAAENGHLAVVVWLSTNRTEGCTTDAIDWAARNGHLAVVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX* # ORIGINAL: g2664.t1 original gene structure, not modified by PASA NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS gene 7677 8888 . + . ID=g2664;Name=g2664.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS mRNA 7677 8888 . + . ID=g2664.t1;Parent=g2664;Name=g2664.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS exon 7677 8888 . + . ID=g2664.t1.exon1;Parent=g2664.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS CDS 7677 8888 . + 0 ID=cds.g2664.t1;Parent=g2664.t1 #PROT g2664.t1 g2664 MAGSKVIFVPLYGRTAHDSVAIGLIDLPYFQRLREVRQLGTAHYVYPSATHTRFEHSLGVSHLAGLLFDSLTQTGQTPFAGVEGSKVIRLAGLFHDAGHGCLSHGFDDQILRRCGISESDPYREHEYRSGLLFEKSVQQLEANGVKTGLTGEEIDLVKLIIHGGGDSHYPPYLFEIVANSLNQLDVDKFDYLSRDAHHLGFSHVNPLDVVAQGRVVDGHIAYPKSMDLDLYNVFATRHRLHRQVYTHKVVRGIQHMIVDAIVGADNEIGLSQSIYNPDEFTRIATDNLVYQIESGSTKSAKILKDLRARKLYRVLKNVIIPTGTVEQKEDEIKAEFPDYRPDQLIVDHVSMGYVKQGVPNPLEHILFYDSKQQDVSFRKAPSSVTNMLPTATSETFLRVYCRV* # ORIGINAL: g2665.t1 original gene structure, not modified by PASA NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS gene 9225 10268 . + . ID=g2665;Name=g2665.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS mRNA 9225 10268 . + . ID=g2665.t1;Parent=g2665;Name=g2665.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS exon 9225 10268 . + . ID=g2665.t1.exon1;Parent=g2665.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS CDS 9225 10268 . + 0 ID=cds.g2665.t1;Parent=g2665.t1 #PROT g2665.t1 g2665 MAHRIEINLFDDRLSSDEDRSDAVVQRQKIRAIGQAHVHAEQAEQAEQAEQAGAANDVEVPLDNVHVDDHEDYEDANALENFFVPHSPPRVRRRQRAKPRQPILCAETDRLIGEHIMAEIDGTARAEWRGLRERIGSAIVNLCMFLNTAADALAGNNHTALSDFVLLSNDAVMYKPLSWMEKRAWTVYNELIDEPQDHGKFAAVLGLSPTERRNVLVGVSLRNRLKELAAAHDVSPDVTGVYELLERTLTALHEKYADLVRVTLVPVPVACAEPTYKHAGEVGDEPELPAGLSFCGICLSRAKNTIIDPCGHGCCITCSRELACGTGPEVRCPECKALVSKFIRSYL* # ORIGINAL: g2662.t1 original gene structure, not modified by PASA NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS gene 1108 1755 . - . ID=g2662;Name=g2662.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS mRNA 1108 1755 . - . ID=g2662.t1;Parent=g2662;Name=g2662.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS exon 1108 1755 . - . ID=g2662.t1.exon1;Parent=g2662.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS CDS 1108 1755 . - 0 ID=cds.g2662.t1;Parent=g2662.t1 #PROT g2662.t1 g2662 MEKVDHERLRIFVRREYTAILRAHPVYQTSPPLPSSAWIADHVLPAITTVLSMIPSNEVAEHVRTVVYNKYVYSKDREQKKSKATLRYHKIKAAMAHASSAIESSKPTDCKAAEAHTHDSSAIESSKPTDCKAAMEAQTHDSSAIESSKPTEQTAQTSTSMDKGHDSILPAVSFSASLDVGLTHSQATHLCGDKEISTFLYNGTHSQLSLNTLLF* # ORIGINAL: g2663.t1 original gene structure, not modified by PASA NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS gene 4957 5859 . + . ID=g2663;Name=g2663.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS mRNA 4957 5859 . + . ID=g2663.t1;Parent=g2663;Name=g2663.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS exon 4957 5859 . + . ID=g2663.t1.exon1;Parent=g2663.t1 NODE_1140_length_13620_cov_64.5305_potentialcontaminant AUGUSTUS CDS 4957 5859 . + 0 ID=cds.g2663.t1;Parent=g2663.t1 #PROT g2663.t1 g2663 MFRDACALALGLLKSGLGDQWKELSKLQEQPLWKEDIGADIVAVKNGKYTFIQCKNYAASTVYISNLAGFMYLMFHLPSVEAVVHYNGTLSANLSRLAGMEREVKYIHTPFAIDPQDSVRDVGDTQTLRQYQIDAIATLAQARRAVLSLPCGMGKTLVAVHLAKSFETVIVLSPTQALAEQNLTVFRRGLAGHVGCFVCTQGTRQIKSLPAKNSIVSATYDSADVVLDLVSSVTPGSQVMIIIDECHSISANAMNNPESPMGKLLRLANPNFCFCRRLRGMPTGRTYSARYRSLTRGRML* # PASA_UPDATE: g9793.t1, single gene model update, valid-1, status:[pasa:asmbl_4486,status:12], valid-1 NODE_2519_length_6016_cov_35.9904 . gene 55 985 . + . ID=g9793;Name=g9793.t1 NODE_2519_length_6016_cov_35.9904 . mRNA 55 985 . + . ID=g9793.t1;Parent=g9793;Name=g9793.t1 NODE_2519_length_6016_cov_35.9904 . five_prime_UTR 55 56 . + . ID=g9793.t1.utr5p1;Parent=g9793.t1 NODE_2519_length_6016_cov_35.9904 . exon 55 143 . + . ID=g9793.t1.exon1;Parent=g9793.t1 NODE_2519_length_6016_cov_35.9904 . CDS 57 143 . + 0 ID=cds.g9793.t1;Parent=g9793.t1;5_prime_partial=true NODE_2519_length_6016_cov_35.9904 . exon 377 985 . + . ID=g9793.t1.exon2;Parent=g9793.t1 NODE_2519_length_6016_cov_35.9904 . CDS 377 697 . + 0 ID=cds.g9793.t1;Parent=g9793.t1 NODE_2519_length_6016_cov_35.9904 . three_prime_UTR 698 985 . + . ID=g9793.t1.utr3p1;Parent=g9793.t1 #PROT g9793.t1 g9793 AAGGKGGFTMARSQRKMFEEMQLRVAAKDLIEARLKEPIPECEGPDDFPESLKDGVVLLKFVASIRPDLIPTPLPTREQSSSLVKARQNIEVFISACKAMGVPESDICSVFDVIEEKDPLKVIRSIRAVARLGVK* # PASA_UPDATE: g9794.t1, single gene model update, valid-1, status:[pasa:asmbl_4487,status:12],[pasa:asmbl_4488,status:12], valid-1 NODE_2519_length_6016_cov_35.9904 . gene 1295 5503 . - . ID=g9794;Name=g9794.t1 NODE_2519_length_6016_cov_35.9904 . mRNA 1295 5503 . - . ID=g9794.t1;Parent=g9794;Name=g9794.t1 NODE_2519_length_6016_cov_35.9904 . five_prime_UTR 5502 5503 . - . ID=g9794.t1.utr5p1;Parent=g9794.t1 NODE_2519_length_6016_cov_35.9904 . exon 4380 5503 . - . ID=g9794.t1.exon1;Parent=g9794.t1 NODE_2519_length_6016_cov_35.9904 . CDS 4380 5501 . - 0 ID=cds.g9794.t1;Parent=g9794.t1;5_prime_partial=true NODE_2519_length_6016_cov_35.9904 . exon 1295 3952 . - . ID=g9794.t1.exon2;Parent=g9794.t1 NODE_2519_length_6016_cov_35.9904 . CDS 1694 3952 . - 0 ID=cds.g9794.t1;Parent=g9794.t1 NODE_2519_length_6016_cov_35.9904 . three_prime_UTR 1295 1693 . - . ID=g9794.t1.utr3p1;Parent=g9794.t1 #PROT g9794.t1 g9794 SDEGISIQNRDDASDALARSLRRGNPSSAAFRLALQGHSGEASTGKPPFMKDTEWNELLLDNVDDMFFVVTTSGRITHVSPSCQQMLGHKPSALIDHRIADFAHPEDLSHIIRQLSSGERNKDFVFRIRRADGDYTWLSVRGKQLLNNGVPSDYIVAVGRIYSVKRVIDMADPLEMEGEFVSKHTLQGVFTYASPNASRILGHRLSDLIGQSAYLFHHPEDIQRISSIHRDVLSSVKELKVTYRFVTRSGEYVWLESATHMFINPVSKSPEFLLVRSHVTGGLQVRVLEPSSTTGSTGTVPRIDSNGGGNGEDSNIVVRASGEGDAPGSVGNSRENLMRDLLHGIMQLRSENLQLRRRIKQMEQDGTGTPGHIQIKPDPDEVPSLQQGISSPLANMTPYVPQMGAGAQQAAPQAQYMSSPLQSAQPQGLTDARASFVDGGDGYAQVGAGPVAVEQLGAGLYAAGGGNDYGMTPGGRPNNIVNNRHPQASMAPVVGMSPPTLQYATMADAKQHVQLQQQQQQHHQQQQQQQQQQQQQQQQQQQQQQSQSHSPYLGHGQAPIVRPSSEGHPGAIPTGSLGALGNIDATATGAWPTQFLAGASVGVAQQLHHHHHHQQQQLHQQQQQQQQQSPQQPQQGQQGQLNSHIIQRVQQHLATMNGTGLNALGNVARTPADAAVQFEKLQMNRLQSAVAAAGYPSMATVSGIQGGQSGQSQINAPHPTQSPLASVQHAIGIASFGGGIDGGVRPPSAQDLLHLQILQQQRHQQQQQLQQLQQQHLQMQMQEMQKLQRTGQNGTDGSGGDADVSMFLQQQQQLQQQQEQQQQQQQQLQLQQQKQQQLQQQQVLRARLMQRASAAGVDSSSPSAMLTYMTGAGAGGGAGASGNGNAANGGSMTIPDLQQTQQQHQQLQLHTQLNQLAPAGGGRAHGGVLTPQLRAQHTPSPPVHSYAGTGDGNGGGNGGGVQPQQAPYDQFTVQQIRMQLQQQQQQQQQQQQQLAMLIHMQQQQQQQPQQRQGEGDGGGACVVGGVIAAGGPGPQGRLAAGPGGPLQRPNADAFHPAGSSAVASGALAVDAPDAGGRLRVAVPGVARAPGIPIIPAAGVSTMDSFLDSLLGESDAALADIAMDFST* # PASA_UPDATE: g9578.t1, single gene model update, valid-1, status:[pasa:asmbl_1431,status:3], valid-1 NODE_1388_length_11632_cov_40.3285 . gene 1567 2605 . - . ID=g9578;Name=g9578.t1 NODE_1388_length_11632_cov_40.3285 . mRNA 1567 2605 . - . ID=g9578.t1;Parent=g9578;Name=g9578.t1 NODE_1388_length_11632_cov_40.3285 . five_prime_UTR 2552 2605 . - . ID=g9578.t1.utr5p1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . exon 2389 2605 . - . ID=g9578.t1.exon1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . CDS 2389 2551 . - 0 ID=cds.g9578.t1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . exon 2202 2267 . - . ID=g9578.t1.exon2;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . CDS 2202 2267 . - 2 ID=cds.g9578.t1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . exon 1966 2076 . - . ID=g9578.t1.exon3;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . CDS 1966 2076 . - 2 ID=cds.g9578.t1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . exon 1567 1733 . - . ID=g9578.t1.exon4;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . CDS 1609 1733 . - 2 ID=cds.g9578.t1;Parent=g9578.t1 NODE_1388_length_11632_cov_40.3285 . three_prime_UTR 1567 1608 . - . ID=g9578.t1.utr3p1;Parent=g9578.t1 #PROT g9578.t1 g9578 MAASALTARLIYFAGSIRGGREDAELYGRIIQHLADKHGKVLTEHVGLASLTSSGESLKTEKWIHDRDMDWLISSEVIVAEVTTASLGVGYELGRAIDLKKRVLCLFRPASGKSLSAMIRGAQDDTGMFVVRDYASLEDATHIIDEYFATLGQR* # PASA_UPDATE: g9577.t1, single gene model update, valid-1, status:[pasa:asmbl_1429,status:12],[pasa:asmbl_1432,status:12], valid-1 NODE_1388_length_11632_cov_40.3285 . gene 110 1383 . + . ID=g9577;Name=g9577.t1 NODE_1388_length_11632_cov_40.3285 . mRNA 110 1383 . + . ID=g9577.t1;Parent=g9577;Name=g9577.t1 NODE_1388_length_11632_cov_40.3285 . exon 110 535 . + . ID=g9577.t1.exon1;Parent=g9577.t1 NODE_1388_length_11632_cov_40.3285 . CDS 110 535 . + 0 ID=cds.g9577.t1;Parent=g9577.t1;5_prime_partial=true NODE_1388_length_11632_cov_40.3285 . exon 819 1383 . + . ID=g9577.t1.exon2;Parent=g9577.t1 NODE_1388_length_11632_cov_40.3285 . CDS 819 1061 . + 0 ID=cds.g9577.t1;Parent=g9577.t1 NODE_1388_length_11632_cov_40.3285 . three_prime_UTR 1062 1383 . + . ID=g9577.t1.utr3p1;Parent=g9577.t1 #PROT g9577.t1 g9577 GDTRDVVVVVEGKESAAFWEAVGGKTEYFRGGDATTAKRRCPRLFTAHNASGQVTVERVFGHSQDDLDDDRVAILETGTEVYMWFGSRAKAVVKRLSMEAVQKYASGAGNRKVWVIQSGQETLEFAAHFQGWSFAHIDSSKQRCMEAGRRTPVGDVIAEYKQDVYRYEELLGESLPVGVDPRKLEAYLSSDEFESVFGMKRSQFDQLPVWKRDNIKKTVCLY* # ORIGINAL: g9581.t1 original gene structure, not modified by PASA NODE_1388_length_11632_cov_40.3285 AUGUSTUS gene 10963 11532 . - . ID=g9581;Name=g9581.t1 NODE_1388_length_11632_cov_40.3285 AUGUSTUS mRNA 10963 11532 . - . ID=g9581.t1;Parent=g9581;Name=g9581.t1 NODE_1388_length_11632_cov_40.3285 AUGUSTUS exon 10963 11532 . - . ID=g9581.t1.exon1;Parent=g9581.t1 NODE_1388_length_11632_cov_40.3285 AUGUSTUS CDS 10963 11532 . - 0 ID=cds.g9581.t1;Parent=g9581.t1 #PROT g9581.t1 g9581 MLDPRLFAHLESIDGLHMFFCYRWFLVRFKREFSPEDICRMWEVDWAASRSSTCRRMHVFCAMAVLDRYADYIVDAKLESDEILELFNSSRSLSSDFAPTLRASRVLIDALSLCVDLPSEIRCLLSPFSRSRRRASDETGAFEQSSDSSDSEEEREIDRERERSPIPFASPTPSAPNPVVVVEEVPAGP* # PASA_UPDATE: g9579.t1, single gene model update, valid-1, status:[pasa:asmbl_1433,status:12], valid-1 NODE_1388_length_11632_cov_40.3285 . gene 2883 4378 . + . ID=g9579;Name=g9579.t1 NODE_1388_length_11632_cov_40.3285 . mRNA 2883 4378 . + . ID=g9579.t1;Parent=g9579;Name=g9579.t1 NODE_1388_length_11632_cov_40.3285 . five_prime_UTR 2883 2984 . + . ID=g9579.t1.utr5p1;Parent=g9579.t1 NODE_1388_length_11632_cov_40.3285 . exon 2883 4378 . + . ID=g9579.t1.exon1;Parent=g9579.t1 NODE_1388_length_11632_cov_40.3285 . CDS 2985 4238 . + 0 ID=cds.g9579.t1;Parent=g9579.t1 NODE_1388_length_11632_cov_40.3285 . three_prime_UTR 4239 4378 . + . ID=g9579.t1.utr3p1;Parent=g9579.t1 #PROT g9579.t1 g9579 MAFPLHLIAIFLGALLVVAHAAPLSDAPATCTRLHPVVIVPGTGGNQLLARLDKPSVPHFFCDKKFDWFRLWLSTQSLLPGAIDCWADNIRLVYNETTDTLENSPGVETKIPDFGGTSAVEALDPSLASVTKYFSTFVDAMVAKGYVRGKSIRAAPYDFRKAPSGDAEYLGSLRKLIEETREMNDNATVVVIAHSMGNLQAIGLFDSVSEEWKKENVKGLVSAAPAYAGSVNALLAIVAGNNEGIPFVAGKTVRPQQRTYESNYWLLPNPAAFGADDAIVSTASRTFSTADFAGLFEDMKFDLGTQMLRRVSALSTHALSYPGVPIRAVYGFDVKTPRSFSFKGTGASAYDEAPDVVESTGDGTVPIESLRVWQRWTAAAQQKGLALDAVELSGVNHAGVVERAEVVDAVMSFACEN* # PASA_UPDATE: g9580.t1, single gene model update, valid-1, status:[pasa:asmbl_1430,status:3], valid-1 NODE_1388_length_11632_cov_40.3285 . gene 5233 10402 . + . ID=g9580;Name=g9580.t1 NODE_1388_length_11632_cov_40.3285 . mRNA 5233 10402 . + . ID=g9580.t1;Parent=g9580;Name=g9580.t1 NODE_1388_length_11632_cov_40.3285 . five_prime_UTR 5233 5417 . + . ID=g9580.t1.utr5p1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 5233 5471 . + . ID=g9580.t1.exon1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 5418 5471 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 5614 5655 . + . ID=g9580.t1.exon2;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 5614 5655 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 5798 5861 . + . ID=g9580.t1.exon3;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 5798 5861 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 6013 6055 . + . ID=g9580.t1.exon4;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 6013 6055 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 6232 6341 . + . ID=g9580.t1.exon5;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 6232 6341 . + 1 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 6489 6565 . + . ID=g9580.t1.exon6;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 6489 6565 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 6867 6959 . + . ID=g9580.t1.exon7;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 6867 6959 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 7302 7378 . + . ID=g9580.t1.exon8;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 7302 7378 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 7557 7762 . + . ID=g9580.t1.exon9;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 7557 7762 . + 1 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 7920 8031 . + . ID=g9580.t1.exon10;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 7920 8031 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 8152 8245 . + . ID=g9580.t1.exon11;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 8152 8245 . + 1 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 8554 8632 . + . ID=g9580.t1.exon12;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 8554 8632 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 8794 8862 . + . ID=g9580.t1.exon13;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 8794 8862 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 9182 9252 . + . ID=g9580.t1.exon14;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 9182 9252 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 9544 9655 . + . ID=g9580.t1.exon15;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 9544 9655 . + 0 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . exon 9974 10402 . + . ID=g9580.t1.exon16;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . CDS 9974 10128 . + 2 ID=cds.g9580.t1;Parent=g9580.t1 NODE_1388_length_11632_cov_40.3285 . three_prime_UTR 10129 10402 . + . ID=g9580.t1.utr3p1;Parent=g9580.t1 #PROT g9580.t1 g9580 MISFVVNVVRFILNCAFAVFGLGVHRLRRPMKDARWLRADYEVKKNILVQHMLASRKGPWYIAHDWYSYILGTRKQPKDSVYLDLSHFNRVIAIDTKGWTAEVEGMTTYEDLVDATLKHGLMPAVVPQFKSVSVGSAVGGVGMQSTSFKHGFVHETVVGMEVLLSDGSVVVCSATANADLFQGIPNSYGTLGYILKATVRLVPTKPFVRIRNLKATEPRQYFDELNSYCRASCYDFVDGIAFGPREHYTVLAEFVDNVPTGEVVGSYTRRGVYYKSIQAKRTDYMRVREYMWRWDPDCFWLSKHFFLQNPVVRLLLSPWCLKSWLFMSVFRIYRSSRFFDKTAKEIVIQDVEVPIERCVEFADFFAREICAKNSLYPAWTCPVRSREPKNTEFPLFALAPGNIFINFGFWGVVPTEGSDCMSTNKLVEKAVSRLGGKRSLYSTHSDREEFWRAFDKASYQRLKEKYDGGNILMDLFDKCTAANLS* # PASA_UPDATE: g3054.t1, single gene model update, valid-1, status:[pasa:asmbl_8432,status:12], valid-1 NODE_6002_length_661_cov_38.7082_potentialcontaminant . gene 1 661 . - . ID=g3054;Name=g3054.t1 NODE_6002_length_661_cov_38.7082_potentialcontaminant . mRNA 1 661 . - . ID=g3054.t1;Parent=g3054;Name=g3054.t1 NODE_6002_length_661_cov_38.7082_potentialcontaminant . five_prime_UTR 660 661 . - . ID=g3054.t1.utr5p1;Parent=g3054.t1 NODE_6002_length_661_cov_38.7082_potentialcontaminant . exon 1 661 . - . ID=g3054.t1.exon1;Parent=g3054.t1 NODE_6002_length_661_cov_38.7082_potentialcontaminant . CDS 1 659 . - 0 ID=cds.g3054.t1;Parent=g3054.t1;5_prime_partial=true;3_prime_partial=true #PROT g3054.t1 g3054 FNTEDVSKLGTVHTLHFELIDIKDVSALGDVHSLQIPRCKGVVDISALGNCHTLNLEECGVSDVSMLGRVHTLNIASTAVSDVSMLGRVHTLNLRKCKKVVDVSALGSVYDLDLGLTSVSDLSMLFAVHTLNVDLCPFTHDVSVLAGVHTLSLIGCRLTDVSALGRVHTLNLGSCKQITDVSALGGVHTLILNGSLVSDISGLIGHGRVRVLSVRGCPN # ORIGINAL: g9752.t1 original gene structure, not modified by PASA NODE_3204_length_4024_cov_37.8273 AUGUSTUS gene 2374 3973 . + . ID=g9752;Name=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS mRNA 2374 3973 . + . ID=g9752.t1;Parent=g9752;Name=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS exon 2374 2449 . + . ID=g9752.t1.exon1;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS CDS 2374 2449 . + 0 ID=cds.g9752.t1;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS exon 2679 2773 . + . ID=g9752.t1.exon2;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS CDS 2679 2773 . + 2 ID=cds.g9752.t1;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS exon 3136 3217 . + . ID=g9752.t1.exon3;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS CDS 3136 3217 . + 0 ID=cds.g9752.t1;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS exon 3576 3731 . + . ID=g9752.t1.exon4;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS CDS 3576 3731 . + 2 ID=cds.g9752.t1;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS exon 3915 3973 . + . ID=g9752.t1.exon5;Parent=g9752.t1 NODE_3204_length_4024_cov_37.8273 AUGUSTUS CDS 3915 3973 . + 2 ID=cds.g9752.t1;Parent=g9752.t1 #PROT g9752.t1 g9752 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINAGGLTSLGIRGADAAVVITQKKVPDKLLVADTVTNVFQISERIGCVMTGMIADARSQVQRARYEAAQWKYTYGYDIPVDQLARRMADIAQVYTQHAAMRPLGVLVCAIAVVGCWLLTVLAFF* # PASA_UPDATE: g9751.t1, single gene model update, valid-1, status:[pasa:asmbl_5716,status:12], valid-1 NODE_3204_length_4024_cov_37.8273 . gene 190 1616 . - . ID=g9751;Name=g9751.t1 NODE_3204_length_4024_cov_37.8273 . mRNA 190 1616 . - . ID=g9751.t1;Parent=g9751;Name=g9751.t1 NODE_3204_length_4024_cov_37.8273 . five_prime_UTR 1418 1616 . - . ID=g9751.t1.utr5p1;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . exon 1316 1616 . - . ID=g9751.t1.exon1;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . CDS 1316 1417 . - 0 ID=cds.g9751.t1;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . exon 959 1077 . - . ID=g9751.t1.exon2;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . CDS 959 1077 . - 0 ID=cds.g9751.t1;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . exon 571 688 . - . ID=g9751.t1.exon3;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . CDS 571 688 . - 1 ID=cds.g9751.t1;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . exon 190 317 . - . ID=g9751.t1.exon4;Parent=g9751.t1 NODE_3204_length_4024_cov_37.8273 . CDS 190 317 . - 0 ID=cds.g9751.t1;Parent=g9751.t1;3_prime_partial=true #PROT g9751.t1 g9751 MASFQEFVDQCEARDGVRFSWNVWPSSRIEATRMVVPISCTYTPLKPREDMPPVYYEPVACAKTTCRAILNPFCQIDVRAKLWICPFCLQRNQFPAHYRDISEQKLPMELVHQYSTIEYTLQRGATIPPVFLYVVDTCIDDEDIQALKDSLVMSL # ORIGINAL: g2941.t1 original gene structure, not modified by PASA NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS gene 2 1449 . + . ID=g2941;Name=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS mRNA 2 1449 . + . ID=g2941.t1;Parent=g2941;Name=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS exon 2 118 . + . ID=g2941.t1.exon1;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS CDS 2 118 . + 0 ID=cds.g2941.t1;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS exon 599 743 . + . ID=g2941.t1.exon2;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS CDS 599 743 . + 0 ID=cds.g2941.t1;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS exon 901 962 . + . ID=g2941.t1.exon3;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS CDS 901 962 . + 2 ID=cds.g2941.t1;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS exon 1360 1449 . + . ID=g2941.t1.exon4;Parent=g2941.t1 NODE_4573_length_1449_cov_16.1514_potentialcontaminant AUGUSTUS CDS 1360 1449 . + 0 ID=cds.g2941.t1;Parent=g2941.t1 #PROT g2941.t1 g2941 QVELGAQVLDLNFDEGMLDSKFAMTKFVNLIASEPEIARVPLCIDSSNFAVIEAGLKCAQGRCIVNSISLKEGEKDFIAKAKLIRRYGAAVIAMAFDEEGQAADEDRKVEICAREFKILTEIVGFNPSDVIFDPNILT # PASA_UPDATE: g1035.t1, single gene model update, valid-1, status:[pasa:asmbl_5852,status:12], valid-1 NODE_3292_length_3809_cov_38.2935 . gene 2 1554 . + . ID=g1035;Name=g1035.t1 NODE_3292_length_3809_cov_38.2935 . mRNA 2 1554 . + . ID=g1035.t1;Parent=g1035;Name=g1035.t1 NODE_3292_length_3809_cov_38.2935 . five_prime_UTR 2 2 . + . ID=g1035.t1.utr5p1;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . exon 2 34 . + . ID=g1035.t1.exon1;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . CDS 3 34 . + 0 ID=cds.g1035.t1;Parent=g1035.t1;5_prime_partial=true NODE_3292_length_3809_cov_38.2935 . exon 223 342 . + . ID=g1035.t1.exon2;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . CDS 223 342 . + 1 ID=cds.g1035.t1;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . exon 794 1554 . + . ID=g1035.t1.exon3;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . CDS 794 1427 . + 1 ID=cds.g1035.t1;Parent=g1035.t1 NODE_3292_length_3809_cov_38.2935 . three_prime_UTR 1428 1554 . + . ID=g1035.t1.utr3p1;Parent=g1035.t1 #PROT g1035.t1 g1035 DPASTPIQAFSWFHGKISREDAEGLLASLLPGSYLLRESERKTGQYVLSVKWPDGCFAHFLVRNPAPDSFSVGTVAFSSIPEMIEYYLGYPLAYAQSVLEQKLIMAVLRGKSTPIPTASSATATVSPHRDTNGQRSATHLQSSSANTRHSSVTTDSPYREPNPSISQRPFASSSPSYGSGGDQHQRSVSAFGGAIGESFTRESETSLDRNRNNAAVAPTKMPRPFPPPASGLQSGHSGHSGHRAAPSYENQYPGPPSYENT* # ORIGINAL: g1036.t1 original gene structure, not modified by PASA NODE_3292_length_3809_cov_38.2935 AUGUSTUS gene 2577 3652 . + . ID=g1036;Name=g1036.t1 NODE_3292_length_3809_cov_38.2935 AUGUSTUS mRNA 2577 3652 . + . ID=g1036.t1;Parent=g1036;Name=g1036.t1 NODE_3292_length_3809_cov_38.2935 AUGUSTUS exon 2577 2607 . + . ID=g1036.t1.exon1;Parent=g1036.t1 NODE_3292_length_3809_cov_38.2935 AUGUSTUS CDS 2577 2607 . + 0 ID=cds.g1036.t1;Parent=g1036.t1 NODE_3292_length_3809_cov_38.2935 AUGUSTUS exon 2790 3652 . + . ID=g1036.t1.exon2;Parent=g1036.t1 NODE_3292_length_3809_cov_38.2935 AUGUSTUS CDS 2790 3652 . + 2 ID=cds.g1036.t1;Parent=g1036.t1 #PROT g1036.t1 g1036 MCAVSTTAFEDNSLLDPKLSPNSQCSSIHSSVASNAAGALLFVCDYFVGSAGATLSYFSYIVRDMDYVPIVAGALNQRTGNSLLGYDAALDNAGRILVAFVESSQPSGASTRLVIAVVDPNAVVVASRRRASGTTSYVNVMDSTTVKQPRIALSAQPDILYVSAVVDSSLSVCRVALSTSQVLCATIAKNSVTQTPYGIAVDGPTVTVAYGTASGDCVVANLDGDKLGVKSVSTVPAGKGAVVKHAAVAYAPRGPLFLVATVVASSGTVSVNLWKFGANSTFSSIVTAADYQAVGFT* # PASA_UPDATE: g7002.t1, single gene model update, valid-1, status:[pasa:asmbl_3461,status:12], valid-1 NODE_2086_length_7813_cov_41.5606 . gene 2329 3159 . + . ID=g7002;Name=g7002.t1 NODE_2086_length_7813_cov_41.5606 . mRNA 2329 3159 . + . ID=g7002.t1;Parent=g7002;Name=g7002.t1 NODE_2086_length_7813_cov_41.5606 . five_prime_UTR 2329 2456 . + . ID=g7002.t1.utr5p1;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . exon 2329 2562 . + . ID=g7002.t1.exon1;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . CDS 2457 2562 . + 0 ID=cds.g7002.t1;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . exon 2697 2779 . + . ID=g7002.t1.exon2;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . CDS 2697 2779 . + 2 ID=cds.g7002.t1;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . exon 2989 3159 . + . ID=g7002.t1.exon3;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . CDS 2989 3024 . + 0 ID=cds.g7002.t1;Parent=g7002.t1 NODE_2086_length_7813_cov_41.5606 . three_prime_UTR 3025 3159 . + . ID=g7002.t1.utr3p1;Parent=g7002.t1 #PROT g7002.t1 g7002 MSSMHQHIQRDWEHREFVETITNGVSKIADFLNTFDASTRYKLATMNEKLTSLERKMDFVEAKLGKTPAASAAE* # ORIGINAL: g7001.t1 original gene structure, not modified by PASA NODE_2086_length_7813_cov_41.5606 AUGUSTUS gene 100 1861 . - . ID=g7001;Name=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS mRNA 100 1861 . - . ID=g7001.t1;Parent=g7001;Name=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 1812 1861 . - . ID=g7001.t1.exon1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 1812 1861 . - 0 ID=cds.g7001.t1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 1618 1703 . - . ID=g7001.t1.exon2;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 1618 1703 . - 1 ID=cds.g7001.t1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 1388 1491 . - . ID=g7001.t1.exon3;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 1388 1491 . - 2 ID=cds.g7001.t1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 1036 1164 . - . ID=g7001.t1.exon4;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 1036 1164 . - 0 ID=cds.g7001.t1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 540 672 . - . ID=g7001.t1.exon5;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 540 672 . - 0 ID=cds.g7001.t1;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 100 227 . - . ID=g7001.t1.exon6;Parent=g7001.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 100 227 . - 2 ID=cds.g7001.t1;Parent=g7001.t1 #PROT g7001.t1 g7001 MAHPTVDWSALDDRYYRKLELYSMLWKSIDISKYVVAAAQNGGPIALVRDDKQLLRVNRQIMKPDIFIYTASGKLTATIPWEKGRIVGLAWTDSERLVSVVENGEILVYDVNGEFLSSFMLDEEVRTSGVLECRFYSTGVVIMTNAFQLFAVTNFEDPRPRSLPDVPGLTDIPRSWAVIEPRMSSSRSLEVLVAVGNTIFVVDGSQAVDT # ORIGINAL: g7003.t1 original gene structure, not modified by PASA NODE_2086_length_7813_cov_41.5606 AUGUSTUS gene 3225 6573 . - . ID=g7003;Name=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS mRNA 3225 6573 . - . ID=g7003.t1;Parent=g7003;Name=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 5921 6573 . - . ID=g7003.t1.exon1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 5921 6573 . - 0 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 5520 5654 . - . ID=g7003.t1.exon2;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 5520 5654 . - 1 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 5166 5214 . - . ID=g7003.t1.exon3;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 5166 5214 . - 1 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 4728 4918 . - . ID=g7003.t1.exon4;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 4728 4918 . - 0 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 4487 4580 . - . ID=g7003.t1.exon5;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 4487 4580 . - 1 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 3931 4321 . - . ID=g7003.t1.exon6;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 3931 4321 . - 0 ID=cds.g7003.t1;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS exon 3225 3619 . - . ID=g7003.t1.exon7;Parent=g7003.t1 NODE_2086_length_7813_cov_41.5606 AUGUSTUS CDS 3225 3619 . - 2 ID=cds.g7003.t1;Parent=g7003.t1 #PROT g7003.t1 g7003 MHAVTSVTARPLRWATRGLLCTPRAALLHTTLSPSACKDERFVAGESAGGRKPTPIVARDSLRSRDDAADNRQSGAGADGQRRRNFMDERGRVHVTGSRSTFTPRGDGYGDFAARNPKFNGQVQSDYAGRKNRAHSGPSSSAFEDRAATDVSEHQGFGDRRHVFGQARAPYEARKSNNSWRGNYGDRVPSGEQKRRPREWAVDGGSAGTRDSKAWWDRRGEDASDAHLCFVFGIGPVAAALQSKQRSFVRLYVEEQKMESATWERIEPLVKAAEDAGVPGIALEASPLSWPTLDALPSPRSNGERNELWVALDGITDPMNFGAILRSALLLGASGVITTARNTAPLSSIVSKASAGAMEVMPVHAARSLPKLLAKSRKAGWSIAAAEADETAQRTAAKRNRGIDRLAASSSCATTGDAAGTDSQPLPPPAAHLNIGDDATVATATSATTGKAAAVHAGEGSRAPGSVSDAGAPDEDGDVEEAMHPCECLTIDTFTGDRPTILVIGSEGSGIRTNVVNQCDRLVSIVSSPVAPATVGANSKAKGKKGSKANKQQSQTLVTTTNATSTDNGSLMPTPGAVDSLNVSVATALLLYKFHSTSRRQSALASAPSVVEEVVPGGMRSSTAASVAVEGAQGR* # PASA_UPDATE: g7004.t1, single gene model update, valid-1, status:[pasa:asmbl_3460,status:12], valid-1 NODE_2086_length_7813_cov_41.5606 . gene 6709 7755 . - . ID=g7004;Name=g7004.t1 NODE_2086_length_7813_cov_41.5606 . mRNA 6709 7755 . - . ID=g7004.t1;Parent=g7004;Name=g7004.t1 NODE_2086_length_7813_cov_41.5606 . five_prime_UTR 7754 7755 . - . ID=g7004.t1.utr5p1;Parent=g7004.t1 NODE_2086_length_7813_cov_41.5606 . exon 7460 7755 . - . ID=g7004.t1.exon1;Parent=g7004.t1 NODE_2086_length_7813_cov_41.5606 . CDS 7460 7753 . - 0 ID=cds.g7004.t1;Parent=g7004.t1;5_prime_partial=true NODE_2086_length_7813_cov_41.5606 . exon 6709 7211 . - . ID=g7004.t1.exon2;Parent=g7004.t1 NODE_2086_length_7813_cov_41.5606 . CDS 6966 7211 . - 0 ID=cds.g7004.t1;Parent=g7004.t1 NODE_2086_length_7813_cov_41.5606 . three_prime_UTR 6709 6965 . - . ID=g7004.t1.utr3p1;Parent=g7004.t1 #PROT g7004.t1 g7004 ESEELLGKLFGENGTTLRGGFFQTNFLGLAGAIKGLSKVFLPAGSCRFAPVDPVDIGRAGAAALVNGLRGGSSTSLKSGAGSINIVDVSGPESFTGDQLAQAFAHVLGRPVAFVDLPLAEAKKSMLSHGMHAWEADFVEACWQFMHRGAIAEPSPDVRLLTGQHSTLAAWIERNRAAFA* # PASA_UPDATE: g1462.t1, single gene model update, valid-1, status:[pasa:asmbl_215,status:12], valid-1 NODE_1057_length_14368_cov_44.1113 . gene 13125 14059 . + . ID=g1462;Name=g1462.t1 NODE_1057_length_14368_cov_44.1113 . mRNA 13125 14059 . + . ID=g1462.t1;Parent=g1462;Name=g1462.t1 NODE_1057_length_14368_cov_44.1113 . five_prime_UTR 13125 13513 . + . ID=g1462.t1.utr5p1;Parent=g1462.t1 NODE_1057_length_14368_cov_44.1113 . exon 13125 13753 . + . ID=g1462.t1.exon1;Parent=g1462.t1 NODE_1057_length_14368_cov_44.1113 . CDS 13514 13753 . + 0 ID=cds.g1462.t1;Parent=g1462.t1 NODE_1057_length_14368_cov_44.1113 . exon 13862 14059 . + . ID=g1462.t1.exon2;Parent=g1462.t1 NODE_1057_length_14368_cov_44.1113 . CDS 13862 14059 . + 0 ID=cds.g1462.t1;Parent=g1462.t1 #PROT g1462.t1 g1462 MEAVVEERGEGGAAERKEATDGASEGVGNGEDVEDSEPEVDSARERSRRKALKDYNVGRTLGKGAHGVVKEASHVLTGEKVALKIVPKSEIDVAGFEIKALKTLRHPNVVRLFEVIETDEEIVLVLELLPGGGHAYTAPGACFGY* # ORIGINAL: g1459.t1 original gene structure, not modified by PASA NODE_1057_length_14368_cov_44.1113 AUGUSTUS gene 1852 5513 . + . ID=g1459;Name=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS mRNA 1852 5513 . + . ID=g1459.t1;Parent=g1459;Name=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 1852 3730 . + . ID=g1459.t1.exon1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 1852 3730 . + 0 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 4077 4216 . + . ID=g1459.t1.exon2;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 4077 4216 . + 2 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 4327 4452 . + . ID=g1459.t1.exon3;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 4327 4452 . + 0 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 4547 4682 . + . ID=g1459.t1.exon4;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 4547 4682 . + 0 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 4769 4887 . + . ID=g1459.t1.exon5;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 4769 4887 . + 2 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 5008 5035 . + . ID=g1459.t1.exon6;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 5008 5035 . + 0 ID=cds.g1459.t1;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 5140 5513 . + . ID=g1459.t1.exon7;Parent=g1459.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 5140 5513 . + 2 ID=cds.g1459.t1;Parent=g1459.t1 #PROT g1459.t1 g1459 MSVSETGAVVARRPSSDALASENARLYDALKEKDAIIAQQRAEIAHLRQVIEELDPVYAMRLRGDAESARSSSGSVQSSDIDVSDAGVRSVSWSIVEEASAPSSPLSASFDSSSGSVAMDGDAEHSPSPESIVAKKITRVRHKRSQSESLRGRIHPFVEQRQLSGHRRSSDTPSVDGTVSLVHGDGGDGGVRSAGREVPSLGPALELAIRRVVDGGARGLRKASCHEASRLASASDEDLLALREGDVEVDPMGAMGKRGCGGGAARKSTAGNRRRAASNMQHAGLLGNAVAYDQYVISADIEEMTRAAIIRKYEGGKYAEAAVAIQNCYRRYKLRSQFSQKVRLGMSFNSPWRAGAAKKAAFLKSESLDGASPKKGIPVIVMNAPECGPGDDADVRAAQPQPQPLPQPLPQPLPKSIPEDGLLLPDDLHESGEDVAFPSSASVASLSTPSTPDNSTVPAADNFNGEEWRRRRLRFGVHRFNRDPTKGIAYLVQHGVLRATPDTISDFLHSQEGLSKRMIGDYLGDGAQFCIAVLERYSHRMDFAGFELDSALRRYLSSFRLPGEAQKIDRMMEHFANRYCECNPGVFASPDTAYVLAFSIVMLNTDLHNPSVKHKMTKDGFVRNNRGIDNNRDLPRSYLESIYDRIAASEIHPGQDHVTIVERIVAEIKGKFAPLSVPYRRFVRSLAAVEVIDTNQKPSRGKHMRTLFLFNDLLVITKVAKRDTLTLRGTSGGRSTTAAEHMFRLSMPVYGMRVQELESKYHKNAFILSDYNEAHVLAFAVDDAAAKNDFLSQLEDMICETTELEEERLGEMEHIMGTGGGPKPNGEYKRARVGTFSPGKVRRKSVSASGAAPDGRSGIRRLSYVLRTNSASGIDGSGAHKSLSPSQSDDSVGSLGPRSSTESSLGSASPAPRLHIEAQGRSRSSTWTPSAFR* # ORIGINAL: g1461.t1 original gene structure, not modified by PASA NODE_1057_length_14368_cov_44.1113 AUGUSTUS gene 8770 12463 . - . ID=g1461;Name=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS mRNA 8770 12463 . - . ID=g1461.t1;Parent=g1461;Name=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 12268 12463 . - . ID=g1461.t1.exon1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 12268 12463 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 12067 12194 . - . ID=g1461.t1.exon2;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 12067 12194 . - 2 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 11848 11981 . - . ID=g1461.t1.exon3;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 11848 11981 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 11693 11766 . - . ID=g1461.t1.exon4;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 11693 11766 . - 1 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 11563 11613 . - . ID=g1461.t1.exon5;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 11563 11613 . - 2 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 11418 11483 . - . ID=g1461.t1.exon6;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 11418 11483 . - 2 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 11147 11329 . - . ID=g1461.t1.exon7;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 11147 11329 . - 2 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 10871 11075 . - . ID=g1461.t1.exon8;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 10871 11075 . - 2 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 10678 10798 . - . ID=g1461.t1.exon9;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 10678 10798 . - 1 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 10486 10602 . - . ID=g1461.t1.exon10;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 10486 10602 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 10320 10394 . - . ID=g1461.t1.exon11;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 10320 10394 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 9825 10232 . - . ID=g1461.t1.exon12;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 9825 10232 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 9630 9740 . - . ID=g1461.t1.exon13;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 9630 9740 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 9440 9544 . - . ID=g1461.t1.exon14;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 9440 9544 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 9251 9346 . - . ID=g1461.t1.exon15;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 9251 9346 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 9092 9166 . - . ID=g1461.t1.exon16;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 9092 9166 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 8951 8995 . - . ID=g1461.t1.exon17;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 8951 8995 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS exon 8770 8868 . - . ID=g1461.t1.exon18;Parent=g1461.t1 NODE_1057_length_14368_cov_44.1113 AUGUSTUS CDS 8770 8868 . - 0 ID=cds.g1461.t1;Parent=g1461.t1 #PROT g1461.t1 g1461 MQQQHYLPPPAMKGPPLRSRTTVLQSGAPPPLQLQMGLNGKSSATESGKLQVGPQVQRTSHSKMEVVSHAINERGEGKENRTSFEELRRGIQRMQEGEKLARRDVEIKESEMLRLRKTIEQQRRSLNELQRTAEGLSIQLEDSEKKSDEAKLRSETTLGACIEITGRIQETSRVLIDAKVDRDSLEKVNSNQRAELNGLVERFRELTFVTAKREGNLKTDLAVAREQVAQLNETVQAKEIELAALLASKQDVWNERNMLMETLGSLQAQLELTNDERATVALQLANATAGKQATDALLSSIRDRLQASTDECAGLRRDLLACRDTLLCKDTEINGFEQAIQAGHTRIADMRTASEDSQKLFSERLISIQRERDAFELKLTESVAAKAALQSDADEIAAALSASVDKLQALQASETCLRHEIEQAKRRAIAAELKSSEDLATATAEITALKLCAETMAAELLCDKAACKSLTSELESTKVEVNRLRNELADALASGAKAECNARAVGREAAARQEETQQRIADLEQQLATIAPILASCQQDHTVARFEELSRLSKEETTLKAVISKLEGENLVLLGKIASLQTELQGRIHELQARLNGAVEAKHFADSALKNSKEECAALSVAVRDLRARLDIKVRELDLAQLPSARQLEITTTVTPSKAPATPSVTPIGTSTPLLKSGNEDYEGSRLSKKAKLRSPSTPPNPMDTTPSIRTARAPKPKRDTASARTPARKGPSGTATRGPRATAPKRDAWVDHDDVWGFDEC* # PASA_UPDATE: g1460.t1, single gene model update, valid-1, status:[pasa:asmbl_214,status:3], valid-1 NODE_1057_length_14368_cov_44.1113 . gene 5817 8766 . + . ID=g1460;Name=g1460.t1 NODE_1057_length_14368_cov_44.1113 . mRNA 5817 8766 . + . ID=g1460.t1;Parent=g1460;Name=g1460.t1 NODE_1057_length_14368_cov_44.1113 . five_prime_UTR 5817 5853 . + . ID=g1460.t1.utr5p1;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . exon 5817 7321 . + . ID=g1460.t1.exon1;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . CDS 5854 7321 . + 0 ID=cds.g1460.t1;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . exon 7411 7551 . + . ID=g1460.t1.exon2;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . CDS 7411 7551 . + 2 ID=cds.g1460.t1;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . exon 7650 8766 . + . ID=g1460.t1.exon3;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . CDS 7650 8665 . + 2 ID=cds.g1460.t1;Parent=g1460.t1 NODE_1057_length_14368_cov_44.1113 . three_prime_UTR 8666 8766 . + . ID=g1460.t1.utr3p1;Parent=g1460.t1 #PROT g1460.t1 g1460 MAVTSSANPWGSRGQGSLGLRPARAATVADEELDSSDLEEVDLDIYQDTSDTDSDISDILVKAIENAGFHSLRQERGKARDCEQKGFDAPDGDDGDSKLADEPKLESIYASLLSDSDDEALRICLSCGDENGFGESLCAHCGRALDDWLPDNTRQRSERPPNQANVAATRQPPVRAGATATKARPLQRRRSEGNARRKKVDATFSRLAAGLPCGPGAGDTTRPRLISLTSCTSDDTGSGSDAPRPMPPPNARPASARSYRPQRPRSATASSILLRPRSASQAYSVSAQISHRIGSHELPHESGPLLPHTPPRPISAANADTMRSTHSLNASVLRRSLSHHRSDDRTQETTDRAVSTSKRDSETGAAASLSRPSSASAKRPRSASLQRPSSASMHGASPSTYQHSVQSHSSLVRPTSASSERPRPPLVRPLSASGFRVPTGRESVDDALQTTLVVARKAVHSDQAVWAASIPRPSSRFNMWTNPVDSGCKEIARPVEWQRVPDEIVLEILRRLSLLDLARCALVSRRFRRISYDRTLWRVISIAGRKLNDDAVASLGLRGARAIALSRCTQFTSRGVQRMCEQGGGRLVSLDLSGAAGVDDAAAMSIAGNCCALLDLDLSWCKVGDTTLVAVARTCRVLRRLRLRGCERLTDAGLARTIELVGESLEALDLFGCFNVGDVAMDAAARHCRALVSLSIGQCNKVSDAALGRLAMSVPSMIELDVRGCKKVRDDALVAIAKACPGLRSLALGFCTLITDTGVGEISRRCRQLMALDLGWCINVSDESMRRLAGDAPSLELLDLSATNITGLTVEAIGLSALRLTTLKLNYCCDITPACLSALLAESASIRDVHLYGCKRVGDIALLHALNPAVTIHM* # PASA_UPDATE: g4985.t1, single gene model update, valid-1, status:[pasa:asmbl_6235,status:12], valid-1 NODE_3575_length_3174_cov_32.6983 . gene 126 2312 . + . ID=g4985;Name=g4985.t1 NODE_3575_length_3174_cov_32.6983 . mRNA 126 2312 . + . ID=g4985.t1;Parent=g4985;Name=g4985.t1 NODE_3575_length_3174_cov_32.6983 . five_prime_UTR 126 127 . + . ID=g4985.t1.utr5p1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . exon 126 313 . + . ID=g4985.t1.exon1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 128 313 . + 0 ID=cds.g4985.t1;Parent=g4985.t1;5_prime_partial=true NODE_3575_length_3174_cov_32.6983 . exon 442 582 . + . ID=g4985.t1.exon2;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 442 582 . + 0 ID=cds.g4985.t1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . exon 830 921 . + . ID=g4985.t1.exon3;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 830 921 . + 0 ID=cds.g4985.t1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . exon 1102 1272 . + . ID=g4985.t1.exon4;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 1102 1272 . + 1 ID=cds.g4985.t1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . exon 1463 1655 . + . ID=g4985.t1.exon5;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 1463 1655 . + 1 ID=cds.g4985.t1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . exon 1894 2312 . + . ID=g4985.t1.exon6;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . CDS 1894 1983 . + 0 ID=cds.g4985.t1;Parent=g4985.t1 NODE_3575_length_3174_cov_32.6983 . three_prime_UTR 1984 2312 . + . ID=g4985.t1.utr3p1;Parent=g4985.t1 #PROT g4985.t1 g4985 LADIGEHYTPEDLGIGRVVSVFNRQFLLYDCDKYTRSYLEDQFGPQPASLAVDDEHKPQTKRTFPPYNGFGSEEDSLGCCVSLVPKPPMKDFVKMIDNEHKILRFAATLRSDKPEDKGRNFIVSYRLADDMITIYEPPQRNAGILGGKFLERTRVLKPGHDRNNPAYYGPADLWIGGVIVVFNHSFHLTDADEYCLRYLEDHPDQFPHANVHAVETKLVGASPAAFVGALGRIDGGRTGRVPRKSFAYAVSEAFADKISLHEGATLARYYDLEKTNEVLYPEFLRNVFNL* # PASA_UPDATE: g10374.t1, single gene model update, valid-1, status:[pasa:asmbl_7317,status:12], valid-1 NODE_4437_length_1619_cov_33.3167 . gene 358 1400 . - . ID=g10374;Name=g10374.t1 NODE_4437_length_1619_cov_33.3167 . mRNA 358 1400 . - . ID=g10374.t1;Parent=g10374;Name=g10374.t1 NODE_4437_length_1619_cov_33.3167 . five_prime_UTR 1323 1400 . - . ID=g10374.t1.utr5p1;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . exon 878 1400 . - . ID=g10374.t1.exon1;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . CDS 878 1322 . - 0 ID=cds.g10374.t1;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . exon 639 679 . - . ID=g10374.t1.exon2;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . CDS 639 679 . - 2 ID=cds.g10374.t1;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . exon 358 506 . - . ID=g10374.t1.exon3;Parent=g10374.t1 NODE_4437_length_1619_cov_33.3167 . CDS 358 506 . - 0 ID=cds.g10374.t1;Parent=g10374.t1;3_prime_partial=true #PROT g10374.t1 g10374 MAQAAAEARSPSMLRTESIPAEIPVRPRTPVRSPFARPSLSYTSDDGLPASGRRSVDSAFRAGDDDDDDHGESYMLVQRVFECYLDRRSGRMNKTTFMRELLTHGLWADDPRISQSIKALSRAPDLLTLAEFADCVGRDIALLARALRGEFIVPEFDLFCKQIEDIYRRTMPNKGGKVADYIPQLARVNPEQYGEAGVHGVRGVHVCAWRS # ORIGINAL: g3759.t1 original gene structure, not modified by PASA NODE_1682_length_9772_cov_59.4586 AUGUSTUS gene 1824 2438 . - . ID=g3759;Name=g3759.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS mRNA 1824 2438 . - . ID=g3759.t1;Parent=g3759;Name=g3759.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS exon 1824 2438 . - . ID=g3759.t1.exon1;Parent=g3759.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS CDS 1824 2438 . - 0 ID=cds.g3759.t1;Parent=g3759.t1 #PROT g3759.t1 g3759 MQSKRTKPRLPVYLMVDVDLSVLQHPSLQKLLKDKPDLAKLSLKNETHVTTLFIKTAQDRVDAVNELKHDGRPVQLTIDAIGYNENAIALRVASMKFVQQSPTEHITACMEAVKIEPTANDQGATDKADNQAINETVPFHGTCPHITVALAEGYPAKNSALTLQGNGTIVEIDPIVTPGTFRQGGQRVPTGNPSDPSVGKSEKT* # ORIGINAL: g3762.t1 original gene structure, not modified by PASA NODE_1682_length_9772_cov_59.4586 AUGUSTUS gene 6117 6443 . + . ID=g3762;Name=g3762.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS mRNA 6117 6443 . + . ID=g3762.t1;Parent=g3762;Name=g3762.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS exon 6117 6443 . + . ID=g3762.t1.exon1;Parent=g3762.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS CDS 6117 6443 . + 0 ID=cds.g3762.t1;Parent=g3762.t1 #PROT g3762.t1 g3762 MACQNANYPEKNLWEFHPTENKPIYRVVIPRGDTGYVEFMSLDDVQSAHEEDDGASTVGEIVSALVRDGVYHVNNPEDYVAFFYHVPGREAFAQLAQDWQSSHPRSGQ* # ORIGINAL: g3760.t1 original gene structure, not modified by PASA NODE_1682_length_9772_cov_59.4586 AUGUSTUS gene 2502 3488 . - . ID=g3760;Name=g3760.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS mRNA 2502 3488 . - . ID=g3760.t1;Parent=g3760;Name=g3760.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS exon 2502 3488 . - . ID=g3760.t1.exon1;Parent=g3760.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS CDS 2502 3488 . - 0 ID=cds.g3760.t1;Parent=g3760.t1 #PROT g3760.t1 g3760 MASDDALYPYNACFVGTHDSGAYTIDFSKRLTNDIIADLSVPLFEQTVKDWTLTQTKNVYEQLSLGARYLDLRISKWNSEHSAAQTAEHSTAQTAEHSAAVKSEFYTSHEFCCAALADVLKDIQRFMEENTGAILLIEITPKYNIADHAELIETVSDALGKWLHPNLRDGTFYATFGKMRRMNERIVMFYPVDVGNTQVWPSGNIVGSWVDTSSPNEKRQMLVKQLQAYVPQPRQTLFHMAYTLTPQTFDVVLSLITKNTMQKMAKKFNETYGEFVKQLDNELCGKVNIVTFDAGDTAAEETKTHWKDDLDDIVGAIGTCLKKPLPED* # ORIGINAL: g3761.t1 original gene structure, not modified by PASA NODE_1682_length_9772_cov_59.4586 AUGUSTUS gene 3646 4092 . + . ID=g3761;Name=g3761.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS mRNA 3646 4092 . + . ID=g3761.t1;Parent=g3761;Name=g3761.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS exon 3646 4092 . + . ID=g3761.t1.exon1;Parent=g3761.t1 NODE_1682_length_9772_cov_59.4586 AUGUSTUS CDS 3646 4092 . + 0 ID=cds.g3761.t1;Parent=g3761.t1 #PROT g3761.t1 g3761 MNALLSIFRSSDLATLPSTGSNGAAGWDIYSAECVAIVPHNRACVKTGIRVIVPHGTYGRVAPRSGLALKKIDVAAGVIDEDYRGDVGVVLVNNSDEPFEVKVGDRIAQLILERILSPNTVQLCELNSDEFANNSTGRGASGFGSTGV* # ORIGINAL: g7831.t1 original gene structure, not modified by PASA NODE_3334_length_3709_cov_39.3002 AUGUSTUS gene 223 2560 . - . ID=g7831;Name=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS mRNA 223 2560 . - . ID=g7831.t1;Parent=g7831;Name=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 2405 2560 . - . ID=g7831.t1.exon1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 2405 2560 . - 0 ID=cds.g7831.t1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 2138 2239 . - . ID=g7831.t1.exon2;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 2138 2239 . - 0 ID=cds.g7831.t1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 1769 1876 . - . ID=g7831.t1.exon3;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 1769 1876 . - 0 ID=cds.g7831.t1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 1134 1247 . - . ID=g7831.t1.exon4;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 1134 1247 . - 0 ID=cds.g7831.t1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 726 850 . - . ID=g7831.t1.exon5;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 726 850 . - 0 ID=cds.g7831.t1;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS exon 223 458 . - . ID=g7831.t1.exon6;Parent=g7831.t1 NODE_3334_length_3709_cov_39.3002 AUGUSTUS CDS 223 458 . - 1 ID=cds.g7831.t1;Parent=g7831.t1 #PROT g7831.t1 g7831 MAAMEESSDRERRKEIYTYTAPWPIYGMNWSVRGDQPYRAAIGSFIEEYSNKVQIIQLDEEQNEFVHKSTFVHPYPTTKIMWLPEKAGSRPDLLATTGDYLRIWDVGDPQGAGVTLKGLLNSNKNSEFCAPLTSFDWNATDPAIIGTSSIDTTCTIWNIETQQVDTQLIAHDKEVFDIAFARGRHVFASVGADGSVRLFDLRQLEHSTIVYESPELSPLLRLAWNKQDDNFMATFSLDSNRVVVLDIRAPSTPLAELGTHRAAVNSISWAPHSACHICTS # PASA_UPDATE: g11152.t1, single gene model update, valid-1, status:[pasa:asmbl_10104,status:3], valid-1 NODE_953_length_15525_cov_40.9484 . gene 1242 4218 . + . ID=g11152;Name=g11152.t1 NODE_953_length_15525_cov_40.9484 . mRNA 1242 4218 . + . ID=g11152.t1;Parent=g11152;Name=g11152.t1 NODE_953_length_15525_cov_40.9484 . five_prime_UTR 1242 1380 . + . ID=g11152.t1.utr5p1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 1242 1668 . + . ID=g11152.t1.exon1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 1381 1668 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 1800 2027 . + . ID=g11152.t1.exon2;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 1800 2027 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 2264 2578 . + . ID=g11152.t1.exon3;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 2264 2578 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 2923 3141 . + . ID=g11152.t1.exon4;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 2923 3141 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 3340 3879 . + . ID=g11152.t1.exon5;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 3340 3879 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . exon 4040 4218 . + . ID=g11152.t1.exon6;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . CDS 4040 4117 . + 0 ID=cds.g11152.t1;Parent=g11152.t1 NODE_953_length_15525_cov_40.9484 . three_prime_UTR 4118 4218 . + . ID=g11152.t1.utr3p1;Parent=g11152.t1 #PROT g11152.t1 g11152 MLAASLRRSVSGGHTGAHTFVISIPRAAYATVSKSDRDYDLCVVGGGPAGFASAVRAYDLGRSVCLIERGHLGGAGVHNGALSSKTMWQLSRKSRVVYDTLKDAGIVPRGNYGSVLRQVAEATTAKEHHMIKQLNDMASSNSHRTVSVLKGSAAFVDPHTVEVTDLKGEKKRVTADNFVIATGSRPRAHNKFKVDGRHVITSDHILDMRDFPKSMLIIGAGVIGCEFATIFANFGQTKVHLLNEGKARLLPTEDEDVTNLISSEMRRMGVHIHNECKLLDLKIHGGKVDCTLGRKRPGSKAGAPDEYEATECFSVEKVLLSIGRIPNLDNIGIENAGVQLDKAGGVAADKHAKSSVPHIYAAGDATADVGLVNVAEMEARHAVERLFGCDETVETELCYDNLSTIMFLNPEVACVGLNEGEARRRRIPYRVGVYGFDLVHRAIINHSATGFVKLIVSADEEMRLLGMRAVGDDSSAVIQTASMLITEGKSISHLARLLHPHPAITEAVQECVRMFYGTSIYKPEFFPSCKVREWYPDNLRRPEEKPNAVVPSYLS* # ORIGINAL: g11156.t1 original gene structure, not modified by PASA NODE_953_length_15525_cov_40.9484 AUGUSTUS gene 11907 15436 . + . ID=g11156;Name=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS mRNA 11907 15436 . + . ID=g11156.t1;Parent=g11156;Name=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 11907 12259 . + . ID=g11156.t1.exon1;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 11907 12259 . + 0 ID=cds.g11156.t1;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 12440 12957 . + . ID=g11156.t1.exon2;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 12440 12957 . + 1 ID=cds.g11156.t1;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 13268 13860 . + . ID=g11156.t1.exon3;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 13268 13860 . + 2 ID=cds.g11156.t1;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 14004 14740 . + . ID=g11156.t1.exon4;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 14004 14740 . + 0 ID=cds.g11156.t1;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 14948 15436 . + . ID=g11156.t1.exon5;Parent=g11156.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 14948 15436 . + 1 ID=cds.g11156.t1;Parent=g11156.t1 #PROT g11156.t1 g11156 MCTATVTLATALPSARTMHIFHTGGLAEFAFPRPHNSSANNVNFSQLPAPSAATNNTDYGLARVASALSAARESAATDGAAFVALDVGDAVSLDPSGLVLRWRHVAQILANNSYFARGLGLRDLQLGSDALADVLGPNATFPYSATPVVCTNCAFAGRLSSRVVKSYVGDVDALSGGSPAVRVAVVAFVSQDATCDYVPCAANAYVFSNEAASLSAEVTRLMALARPPDVVVCMSSTASIAQVRILAGIIPRIDVWAVAGQSVHLTTSGLPDAVANQPSVAGQMPVTLTNGRKSFVSGIADGRFVAWLNVTTETAATGSTAPLVACTPTQTTAAQFPDIACFGAHNATQQMLENASHAAAVVWSAAMASNASVSLNGPLADCAFAECSAGSFVADAIAAAFGSVCSAVIVTAASLGVPVLSGVAPTLASLVSLARPDVRLSMFSAVGGELIASLTHAVSTLTRLDVIGNSTRRAAAVASNPSLLKFLQVSHVRYIFDPTQPSSLRIARADVGGGASGVDTRLFYRICASSDVRLGGLGFTAFESNAVNPNDNGPLLSGIIAARVLGLADYPSASSPSDWNTPAVDGAIGSVVASARYAASILGQSINPATFVWTNGRILALATNGGGGLFECSTRCINGVCASNDMCVCLEGWTGTACDVHVGGGSESHTAAIAAGIVGGVVGISIVCIMVFRARGFQLSVRRRLMRTWVNEIKYDQLSLLEKIGEGGCGIVFKARYHGTIVAVKKCLNMRVKERESKPANNNNPGPSVTGDDIGSVRIRAARALNTVSSMASRRSRQKKARKSGAGESIHSAGSTFSHDARVKGWGSGSTDPRRFTSGESYHSTLHTGALSRDSVPTGPFGRALARLGEVVPCIGRLKEKLDAASVTLMDEIEIM # ORIGINAL: g11151.t1 original gene structure, not modified by PASA NODE_953_length_15525_cov_40.9484 AUGUSTUS gene 132 893 . - . ID=g11151;Name=g11151.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS mRNA 132 893 . - . ID=g11151.t1;Parent=g11151;Name=g11151.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 132 893 . - . ID=g11151.t1.exon1;Parent=g11151.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 132 893 . - 0 ID=cds.g11151.t1;Parent=g11151.t1 #PROT g11151.t1 g11151 MDAPASITTPLMASSNGDGSPCDVCEWAPEGQSRGAATDRSRQYPVHVGRDASMPSADTAQSTSRTTSQPSLWDRLTSPFVRGERTAEGAVYFPVRHSVNDEGVGGDGSHCPPGELHDDPLKEPLFGHAGTPGGVRVAEGFLRRPDIEDEVHFGPRSRRRSIRESLETSGGRPSARPSSSSSAAAFVSASTGAVVASVTKLGNVLRDKLRVAPSVRPSEDKHPERHAREVEHMLHAHRDHLGPLGGGMKVQLR* # PASA_UPDATE: g11155.t1, single gene model update, valid-1, status:[pasa:asmbl_10105,status:3], valid-1 NODE_953_length_15525_cov_40.9484 . gene 8886 10963 . + . ID=g11155;Name=g11155.t1 NODE_953_length_15525_cov_40.9484 . mRNA 8886 10963 . + . ID=g11155.t1;Parent=g11155;Name=g11155.t1 NODE_953_length_15525_cov_40.9484 . five_prime_UTR 8886 8906 . + . ID=g11155.t1.utr5p1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . exon 8886 9126 . + . ID=g11155.t1.exon1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . CDS 8907 9126 . + 0 ID=cds.g11155.t1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . exon 9368 9448 . + . ID=g11155.t1.exon2;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . CDS 9368 9448 . + 2 ID=cds.g11155.t1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . exon 9614 10073 . + . ID=g11155.t1.exon3;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . CDS 9614 10073 . + 2 ID=cds.g11155.t1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . exon 10408 10474 . + . ID=g11155.t1.exon4;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . CDS 10408 10474 . + 1 ID=cds.g11155.t1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . exon 10715 10963 . + . ID=g11155.t1.exon5;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . CDS 10715 10870 . + 0 ID=cds.g11155.t1;Parent=g11155.t1 NODE_953_length_15525_cov_40.9484 . three_prime_UTR 10871 10963 . + . ID=g11155.t1.utr3p1;Parent=g11155.t1 #PROT g11155.t1 g11155 MSGSFGLVVRSVLLLVCFVQLRDARAAPGPEIGTLVVFGDSFNDNGNVFALSNGTWPLPFYYRGRFSSGPVYHDIVASKLNIQLYDFAFGGATTDNAYVQGYSGPTGELPVPSVIDQVAKYLSSSAPPPTDPSVVFTVAGGANDYFFLNEQSNVSRTIDHIFGAVRRLYTRGARRFIVPNLFPGRLLPYVQSNPQLKALFSHLMTTHNALLEASIPSLRDELLGASIDILRVEDVFLDLEATGPSKGFTEPISSMCVNLFASPAPTVCDNSKNYVFFDSYHPTTGVHAIIAQKNIELVASPMQLWRIAMKDWQESFRLWKESAVGCD* # ORIGINAL: g11153.t1 original gene structure, not modified by PASA NODE_953_length_15525_cov_40.9484 AUGUSTUS gene 4370 6022 . - . ID=g11153;Name=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS mRNA 4370 6022 . - . ID=g11153.t1;Parent=g11153;Name=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 5718 6022 . - . ID=g11153.t1.exon1;Parent=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 5718 6022 . - 0 ID=cds.g11153.t1;Parent=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 5311 5518 . - . ID=g11153.t1.exon2;Parent=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 5311 5518 . - 1 ID=cds.g11153.t1;Parent=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 4370 5182 . - . ID=g11153.t1.exon3;Parent=g11153.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 4370 5182 . - 0 ID=cds.g11153.t1;Parent=g11153.t1 #PROT g11153.t1 g11153 MTRARAAYRSAKADSDSVHLDSDGRRRAVGGDAAAKAKAKGAVGGRRQGSRRWLSRVFVMCVWAAAAYALAGLSVTWSVGPREHAAADRTMRLPPIAGAVRVELAGKAAGGAHVTLSAWMCGNVSSSAPLVVLLHGFPDTAGTFKHQMRRLCDEDGGAKWRVIAPVQRGYELSSAVDGDDYSLAALADDALAWCRKLRADKDGGGVHVVGHDWGAAVAYAFGALHGFSINLRSVTTLAVPHGMDAGLYRLPSQILNSWYMLFFQLPWAPELLLGLPAKHVLLLKLWRAWSPTWAGLGAAFGEDVGGVHAGADVRDAVEALSSVSAAFSHPSIVRAAVGYYRRNVIIGLLPRAFFAARGDANAVRTSVAMDMATPIHAPTLAIGGTDDGCIDTRMYDVVRDESLRAFVGGLRVEKVRGVGHFVQLEAPDETTDLLVRWLDSH* # ORIGINAL: g11154.t1 original gene structure, not modified by PASA NODE_953_length_15525_cov_40.9484 AUGUSTUS gene 6405 8150 . + . ID=g11154;Name=g11154.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS mRNA 6405 8150 . + . ID=g11154.t1;Parent=g11154;Name=g11154.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS exon 6405 8150 . + . ID=g11154.t1.exon1;Parent=g11154.t1 NODE_953_length_15525_cov_40.9484 AUGUSTUS CDS 6405 8150 . + 0 ID=cds.g11154.t1;Parent=g11154.t1 #PROT g11154.t1 g11154 MLCIMCVLCTRAALFALALLSPAAVSSSPSPVDEALDIINRFAYVMDLNHPQDAELLRTLPSRLSLLIDDPAMPQPPPPLLLNASIRSLYRMRAHVTKDALAGGRAETVSTEEHALLAPWALSLFQLLVDSGVDIDASGSDSGMTALHLALTFREHSAADVLLRRMRDVDVACPQLYGMTALHVAVVNDDAAGVRLLRRHCADASAGDAYGRSSIDIASSSHELFSDGATMSALLDADADHRCEECPWGDPTLRRRPLMQCMRRSAADASHLRRHTRGSTCPFPRVPVTEMSRARYARDHLSLRRPLILTGATENWAVRSSWQRQSLAHAFGSLEVQVGGIPYGDVFGVAHGRTTLAAYSLYLDKVRARGPPQKEPGYVFDPDILNAKSDFFSADSNALPQWLTSSLIADGLSHGRRVDEGIDNSNYSHSHSNSNSDNNSIGTNNTANDRASAHIEVPDKESVHVTRQFFLGPAGSGAPFHFHCEAVNALVRGRKRWLLTPPSSSFYTKLHPLQWAVKVHGSAFASALLYGSAEAVDRESSLAVCDQGEGDVFVVPSFWGHATVNLDESVGFAFEFDRGDC* # ORIGINAL: g12405.t1 original gene structure, not modified by PASA NODE_3959_length_2457_cov_35.364 AUGUSTUS gene 312 2093 . - . ID=g12405;Name=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS mRNA 312 2093 . - . ID=g12405.t1;Parent=g12405;Name=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS exon 1838 2093 . - . ID=g12405.t1.exon1;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS CDS 1838 2093 . - 0 ID=cds.g12405.t1;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS exon 1435 1575 . - . ID=g12405.t1.exon2;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS CDS 1435 1575 . - 2 ID=cds.g12405.t1;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS exon 777 937 . - . ID=g12405.t1.exon3;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS CDS 777 937 . - 2 ID=cds.g12405.t1;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS exon 312 467 . - . ID=g12405.t1.exon4;Parent=g12405.t1 NODE_3959_length_2457_cov_35.364 AUGUSTUS CDS 312 467 . - 0 ID=cds.g12405.t1;Parent=g12405.t1 #PROT g12405.t1 g12405 MSVQTPEHPQSAPSTPLPSVKSLPAAIRLPSMSPSSNKRSTQTQLSPLPSASSSVSLQPRVRSKTLLVPLVPFKSLHNLSAAVQPVTTIRFARAAPFILAFASTSGSIAVTHATAEELKHVATLTGHNGAVNDFDITADGASIVSVGSDKTVRIWSVKDGKCVATFPTKREVNAVIFHPQHQDFYLYGNNKNSLVSCMVEGGKRCQKLALKAPIKSIAIDHTGELLFVGDSKVRTHT* # ORIGINAL: g9288.t1 original gene structure, not modified by PASA NODE_230_length_30349_cov_43.3748 AUGUSTUS gene 8659 9980 . + . ID=g9288;Name=g9288.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS mRNA 8659 9980 . + . ID=g9288.t1;Parent=g9288;Name=g9288.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 8659 9279 . + . ID=g9288.t1.exon1;Parent=g9288.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 8659 9279 . + 0 ID=cds.g9288.t1;Parent=g9288.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 9477 9980 . + . ID=g9288.t1.exon2;Parent=g9288.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 9477 9980 . + 0 ID=cds.g9288.t1;Parent=g9288.t1 #PROT g9288.t1 g9288 MFADSLDYPLVDAPLRSIACPADVTLPPCHIRRRLRCATGVAAGGSPCGAGPNTAGSNPAIRERVALVFLGASTPRNNKRNALTDSCWQSGAFDRVLMCELPHVFAYGMDSRGVARDRDGDDGGEYEGPILSQAEAAVSVRAAVYPILRNANVDTVTIVAYSMGSVLAAHLWHDFQSVCAHHFPLEKARLRAVLVGCGLTIPVHIKQVVGAFFTIEGQRARNIAADHGPNFDAILRCIREWIAVPDGPTFFIDDLGQRRDITLNPLVHFIRARDDIVYTLDSIFSGEDPYPASAGVDVSRIPYAQLQARVRDEFALQHLSNRHGQDGSCAKVHVIPGDHFAMFGIFVQYMKEVAIGCFRHLDHIGPRMEGLSKL* # ORIGINAL: g9287.t1 original gene structure, not modified by PASA NODE_230_length_30349_cov_43.3748 AUGUSTUS gene 3597 7785 . + . ID=g9287;Name=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS mRNA 3597 7785 . + . ID=g9287.t1;Parent=g9287;Name=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 3597 4024 . + . ID=g9287.t1.exon1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 3597 4024 . + 0 ID=cds.g9287.t1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 4230 4492 . + . ID=g9287.t1.exon2;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 4230 4492 . + 1 ID=cds.g9287.t1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 4811 5880 . + . ID=g9287.t1.exon3;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 4811 5880 . + 2 ID=cds.g9287.t1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 6040 6133 . + . ID=g9287.t1.exon4;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 6040 6133 . + 0 ID=cds.g9287.t1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 6359 6939 . + . ID=g9287.t1.exon5;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 6359 6939 . + 2 ID=cds.g9287.t1;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 7171 7785 . + . ID=g9287.t1.exon6;Parent=g9287.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 7171 7785 . + 0 ID=cds.g9287.t1;Parent=g9287.t1 #PROT g9287.t1 g9287 MKRVRSVRRGDDGANTQTGGQLQQQQQPPSQQPQYDKDYNPSQSLPHAVGASSAVGVQNGGSNGNGNGVFSASSNAFPWVVNFDMSNRTGIDDSFGAFPETAASMAHPQGQRYTFQQVQRGGAAEPFVPKAEPEDMGSDDAKRKFESDGENDDFGTDAQLGNGGTKKRTRSYRESHNAIEKRRRDRINSSLRSLSQLVPECAAAATRLDKADILRMTVDYLNLLKAAGRLGPCDPTSTPSHATPYNNSLPYGQSPMSMTTVSTVNNVHPANSNSSSFMRQQSTDGPVKQLIHVPVVALAPQGVSESKWFHFLLDEELDLFHVFTASGRIVHMSDSCQKMLGYNASELVGLNMYDLLHQEDSEAIGSELSHPDVTAAAHRQRGCVGELSYRLRKRNGAFKWLQVRGRLVTCTTLRSEGAPSGSVGTAHSNTSDSGMDSTSNTVTSPTTTQDGSLQGQLQQQQHQQNPQQQQQQQQQRMSARDFNGSEQGTVGAMTSAVVAAHQAQVNNPSELYFVALGREHSFRQIISASGLVNCLAANEFISRLNLFGIFMYLSPSSTHLIGYEADEMIGKSAYSFYHPEDVYQLSQIHERVLGLAQDDAVATVKYRFMTKDGSYVWMESKMHAYLNTATNAPEFLLCSNKVLDVSSEPVGAPRFFTQLDCGRPGFLRHSSPQYGAVLNPPLDNDSALALLDNALMLNIRNKELEMKLRTAVGGPLTPQMLYRPQQQLQQQQQQQQQQQTQQMQQQTQQMQQQQQQQQQQQQQQQQQQQQQQQQQPRQNMGGAQLPQQAVGAQLLAQRNAPQQVAPPAQLHHSGSFSKLPPAQIAQIVAAASAQQQAREHQQHQHQQQQQQQQMSGQPQSAQGRGMTASARSFDGQSSYCAPAVAVNNAAAQLLQQPFAHNPSVRHRASSVAGHVSPAPSPIPGGMPLQLQNGSMQQQQQQQQQPHMQGNAPPQGRMGFGASAPHSHGTAPGQGQGPTGAQMEDAPDDTSLGSFYARYGGTMDAEGDENMFDMFDM* # PASA_UPDATE: g9290.t1, single gene model update, valid-1, status:[pasa:asmbl_4015,status:12], valid-1 NODE_230_length_30349_cov_43.3748 . gene 15816 22440 . - . ID=g9290;Name=g9290.t1 NODE_230_length_30349_cov_43.3748 . mRNA 15816 22440 . - . ID=g9290.t1;Parent=g9290;Name=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 22243 22440 . - . ID=g9290.t1.exon1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 22243 22440 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 21896 22000 . - . ID=g9290.t1.exon2;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 21896 22000 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 17739 21614 . - . ID=g9290.t1.exon3;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 17739 21614 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 17250 17474 . - . ID=g9290.t1.exon4;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 17250 17474 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 16874 17044 . - . ID=g9290.t1.exon5;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 16874 17044 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 16555 16642 . - . ID=g9290.t1.exon6;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 16555 16642 . - 0 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 16340 16409 . - . ID=g9290.t1.exon7;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 16340 16409 . - 2 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . exon 15816 16060 . - . ID=g9290.t1.exon8;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . CDS 15943 16060 . - 1 ID=cds.g9290.t1;Parent=g9290.t1 NODE_230_length_30349_cov_43.3748 . three_prime_UTR 15816 15942 . - . ID=g9290.t1.utr3p1;Parent=g9290.t1 #PROT g9290.t1 g9290 MSWNWGSLNSLAQQLQDKLDNYIDPNAAPEDDAAQAGASLEGPAPKPKSHASNGHIAAGITDANVAQVLSENRELRDTVQVLENQNIQISKEYRRLLQEKEKEVVQLRASIDSSMTPLANELEAQNAAIVSLRAELSEKTSRVVQLEASVASLKAEGERQEGIVRGLNTKGELKFNKLKAQAKAKIQALQDELDKVKGGVSGAAFGDGFLASAPSSAPGTPLKVTRENSDEDTSDGGDAVAQLKELLVTSENARKDAEARLGELKLELEKSREIASRSNSESPVDSEAAVVAAEHAAGLEALVASLQAELASLRLETAAARAESAALKDDVRVKDEHAHRMQSALERARKDRDAASATMEEKDALVVDLEAEVTRLKSEVASLGASLTSASEGNDDALSRARATAAEATVARETAESALKEASDRIAALTTELEGAFAARETSESGCKTAESALKEASDRIAALTTELEGSSAAREMSESGCKTAESALKEASDRIAALTSELEEVRVAARDADVVDTARKDGTVMDGLQAQLTAAETLVDQLRASVVTAEERSVVAESTVETLHAQLNSLKEEYDAVLVSVRAELQDALNLHSELIATNASLKDRLDAAESAASGGMAGSAEALQQEKDGKAAIEALFVSAQSERASVEARLEDASARIVELEGLLEDARTKAREADERGTSDKAATLQLEAQLHASSARVAQLEREVGELHHVTGEAAEVERLREAGWEKRAIDAEAALSDAEKRASDALNELARTSREFTELQATLAAAKEEGSRAASEVEQLRDEMDDTRALLTKAEAAQEAAVAALTSARKEWSERETQSWDDLEKATAEADEAREEARAAIVARAGLESRLVIAEDSLADALKAREEVISRVALLEEHLASKDDNAGGEVQRLGIELATITTRCEGLTAELNAATTEAARLSGELAAAADEHEKSVRQLAEANAEITRLSAELLESTSTVESLRALEAQLSARDSAEADLRSALLAKDVEVTALKEQIETTGAAIKRANEERDALSLESESAASELSALKEEKQREMDDLRATIGELQANARVLEQTMGQSAHAAAEETAQREAALRAELALRETAVWDAQEESGRLSRQLADTQVQLAKISEELNARVEALSEKAKEESTLRADAEGELERERAARGELQRKTQEYISERSEAERRLHELVLARDSMDAAVVSERDARVKAEAEVARLAEAYAGVAAEKDALLARATEAEHSLTESARHVTRLEASVRSAHEDSSRAADYAGRLQDAEERVYALTRELDETISRKEEMEGVLHDARVSAQRGMEAESLLRGELTTARAQIADLMASLSSREQDVAKMEEELDELRLEKENGVMASAPSAAVSRAQVEAAETALAEAVRERDAGRSTVAQLQSKIEQLSSELSESRALLNQQQQQHGQTVRREASVEVQQQLAQSQQQSRALADRLAQAEARLAGAQRSAVGPPDEEQRPHAASGDQSHGDELTLLQRRLAMVEDKSRGYQREIDSLNETLRACDRRRAAAEEALENYATVAGSSSSTRQYDSFEIDIPGFASDVNIGADSSHVDVAKAYASKAVRWFNRQSVSLTWMMQSRSRFRLALLVYVLFLHAYVFTCMWFTTHG* # PASA_UPDATE: g9291.t1, single gene model update, valid-1, status:[pasa:asmbl_4016,status:12], valid-1 NODE_230_length_30349_cov_43.3748 . gene 22800 24271 . - . ID=g9291;Name=g9291.t1 NODE_230_length_30349_cov_43.3748 . mRNA 22800 24271 . - . ID=g9291.t1;Parent=g9291;Name=g9291.t1 NODE_230_length_30349_cov_43.3748 . five_prime_UTR 24221 24271 . - . ID=g9291.t1.utr5p1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . exon 24151 24271 . - . ID=g9291.t1.exon1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . CDS 24151 24220 . - 0 ID=cds.g9291.t1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . exon 23891 24006 . - . ID=g9291.t1.exon2;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . CDS 23891 24006 . - 2 ID=cds.g9291.t1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . exon 23662 23728 . - . ID=g9291.t1.exon3;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . CDS 23662 23728 . - 0 ID=cds.g9291.t1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . exon 23316 23440 . - . ID=g9291.t1.exon4;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . CDS 23316 23440 . - 2 ID=cds.g9291.t1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . exon 22800 23040 . - . ID=g9291.t1.exon5;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . CDS 22855 23040 . - 0 ID=cds.g9291.t1;Parent=g9291.t1 NODE_230_length_30349_cov_43.3748 . three_prime_UTR 22800 22854 . - . ID=g9291.t1.utr3p1;Parent=g9291.t1 #PROT g9291.t1 g9291 MGPWGWYLRQLGRRPLLTQVSTTGVLFVVGDTIAQQAIEKRGVEKHDFERSARMGAVGLVFVGPVLRGWYAFLDKIVPFRKPAAAAIAKVVLDQTICAPVFLYSFFCILSSLEGKSKYDTQKRLDQDYIPTLIANYKLWPATQIVNFYFVPLQHRLLVVNTVALAWNSYLAYVANGEIRSSKDSSSP* # ORIGINAL: g9286.t1 original gene structure, not modified by PASA NODE_230_length_30349_cov_43.3748 AUGUSTUS gene 234 1461 . - . ID=g9286;Name=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS mRNA 234 1461 . - . ID=g9286.t1;Parent=g9286;Name=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 1385 1461 . - . ID=g9286.t1.exon1;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 1385 1461 . - 0 ID=cds.g9286.t1;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 1202 1277 . - . ID=g9286.t1.exon2;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 1202 1277 . - 1 ID=cds.g9286.t1;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 772 871 . - . ID=g9286.t1.exon3;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 772 871 . - 0 ID=cds.g9286.t1;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 475 606 . - . ID=g9286.t1.exon4;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 475 606 . - 2 ID=cds.g9286.t1;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 234 375 . - . ID=g9286.t1.exon5;Parent=g9286.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 234 375 . - 2 ID=cds.g9286.t1;Parent=g9286.t1 #PROT g9286.t1 g9286 MGTVFLNVGQCGNQVGSALWKSIQQEGNSDYLGFRKGDGTVPCILVDSESKVVRRSVSEGKQHQLYSKTNIITDASGRGKNWAYGYYGSRGENTLVARAMDAVRMEAERSDVRPSFVFLHSLGGGTGSGVGSRLCEEVRDAFPSSFIVSSCVLPHLSGETPTQYYNALLALDTLQ # ORIGINAL: g9292.t1 original gene structure, not modified by PASA NODE_230_length_30349_cov_43.3748 AUGUSTUS gene 25691 28649 . + . ID=g9292;Name=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS mRNA 25691 28649 . + . ID=g9292.t1;Parent=g9292;Name=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 25691 25804 . + . ID=g9292.t1.exon1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 25691 25804 . + 0 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 26107 26183 . + . ID=g9292.t1.exon2;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 26107 26183 . + 0 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 26356 26484 . + . ID=g9292.t1.exon3;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 26356 26484 . + 1 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 26619 27067 . + . ID=g9292.t1.exon4;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 26619 27067 . + 1 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 27214 28064 . + . ID=g9292.t1.exon5;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 27214 28064 . + 2 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 28199 28357 . + . ID=g9292.t1.exon6;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 28199 28357 . + 0 ID=cds.g9292.t1;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 28557 28649 . + . ID=g9292.t1.exon7;Parent=g9292.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 28557 28649 . + 0 ID=cds.g9292.t1;Parent=g9292.t1 #PROT g9292.t1 g9292 MVQQTFATPAQAAPADERDLIVSVVSSVLTKMVSRAESQQVHGPLTRFDASKIPGISIQSYLDRIVNFAPCSPECFIIALVYIDRVVKMNPKFVITSYNIHRLLITSTMLAAKYLDDCYYNNSFYAKVGGVPPAEMNILELEFLRLADFNLGVSKKLYDQYRHELHRQHRHVVAQAESSPRTSTCLSPPSSGLSCASASSMCSSSPASSSSGLAVAGASAASQGVQHVLPHVVPTGLCGASPLSNRHLPLSPVSQQASPIPKFGHGWSAMTPHAHQSSHNAFLAAQTGAPYSFTGASTPVRGGHHQQHQQHQQHHQQHNQQQQYQQQYQHQSQLSQGSYAHPGQQPLSHIAQPHAHYTSTVHQQLQMQQQMAAMPPLVAAHTMLQLGGPSPSPSPFPAHAHAHSHSHSHSSMSLNGSFNGGYSNSNGSSLNSSLNGSFSYCASSNGSSNGSSLNGSFNGNQSFGSAHHVQPSVPSTPYGVSLNAAQTLPFSAHAHHVPSAQSAAFGTFCAPCECFSENEHRQRVEQCRNSIHGMCQKIVEAEIEANRLPWSVAMRASQLLATEESRSTSAFGLQCTHYQWMDILRLVFEILAMENAGFTASTYSRAYKGFSFNSTATLNHAVA* # ORIGINAL: g9289.t1 original gene structure, not modified by PASA NODE_230_length_30349_cov_43.3748 AUGUSTUS gene 10993 15007 . + . ID=g9289;Name=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS mRNA 10993 15007 . + . ID=g9289.t1;Parent=g9289;Name=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 10993 11065 . + . ID=g9289.t1.exon1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 10993 11065 . + 0 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 11566 12306 . + . ID=g9289.t1.exon2;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 11566 12306 . + 2 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 12626 12763 . + . ID=g9289.t1.exon3;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 12626 12763 . + 2 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 13035 13087 . + . ID=g9289.t1.exon4;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 13035 13087 . + 2 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 13348 14055 . + . ID=g9289.t1.exon5;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 13348 14055 . + 0 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 14349 14428 . + . ID=g9289.t1.exon6;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 14349 14428 . + 0 ID=cds.g9289.t1;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS exon 14671 15007 . + . ID=g9289.t1.exon7;Parent=g9289.t1 NODE_230_length_30349_cov_43.3748 AUGUSTUS CDS 14671 15007 . + 1 ID=cds.g9289.t1;Parent=g9289.t1 #PROT g9289.t1 g9289 MNFFKSIFTSEADKKKAEGASEPTAAALSGGGLKDVSELAKDIGSLSISAETASAPAVAAAPEAAAAKSEGSGSQSGSHAANKGTKRGREQKKAKVEANEGDVQGGESPASAGTESTPTPTGADTATEKKNGGRRERKERPPKGAVAESGAVTTTADGAVTTDATAGAAAATGATGTAKVANESGAAVETKDGGKAKGRGRGKRGDRATDATAKDDTTGGSSGAEKEGEPSGAAKEKRVRRPKQAKEAAASAVSGEAGAATPVVADATAADAAAASTGDKKQKRRGDRKPKPATLDGAASGTPDVAQAADGGNGAAPVPASGRKQRQPKKIGEYKPSEVSQQEDEVEPVEGDAGKSGRRQRRPRKSPTSGDGAASTNSEQTAKDAPTGDAPQATDKESGRRGRGRGKKGAVADSTNTAVAVAVGVDGAPTESASGAEGTAEGGAPKGRRNNNNRRGKRADGTASAAPAEGATAVEGGAGGAAVGAATPASASATPRWADEELSAPEGSAVQVKGGRGRARGRGRGDRNAAGGASAAATTTTKTAPAGAQTAENGQSGGRGNPRRGAPRPAESDANALAEGVANIRLDGGGASGQIAGRRRGRERVFTPGTRTDNGQPTQQSNGDASASGVNSSNNNNNNNSNGAGRARGRGTGTGGRRGGRGGNSSASGQGNPADAKWREERSQVDRDRIDRQRTAAGTWKREWDQEKQ* # PASA_UPDATE: g12797.t1, single gene model update, valid-1, status:[pasa:asmbl_9901,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 14248 15823 . + . ID=g12797;Name=g12797.t1 NODE_89_length_41992_cov_43.0583 . mRNA 14248 15823 . + . ID=g12797.t1;Parent=g12797;Name=g12797.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 14248 14384 . + . ID=g12797.t1.utr5p1;Parent=g12797.t1 NODE_89_length_41992_cov_43.0583 . exon 14248 15823 . + . ID=g12797.t1.exon1;Parent=g12797.t1 NODE_89_length_41992_cov_43.0583 . CDS 14385 15725 . + 0 ID=cds.g12797.t1;Parent=g12797.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 15726 15823 . + . ID=g12797.t1.utr3p1;Parent=g12797.t1 #PROT g12797.t1 g12797 MKSSVSQAAPRALANCFPGLAAPHVSRRPLFAQRSLASASARLIFGTSQSVFVSSVGVSESLSRCIHRIPSNVHPQLSRSMATSTSNAGVSLTAAGEGPVYINTHLEYVAPFFEKDLRAVVRRIPGYENAEPRFSRISGALSNIVIKCDFAECASQCKSLLCRIFGQDNDVMSREDEENIFHELAEKSFGPDLIAKFKNGRFEQFLNGRPLLAPEMRDGPVADLVAQKLRVLHGLNMMRIRRDNVLVYRALQGWLDEVLKLPRGANALRDKLAATGPAEVTWLISQLRAREGPVVFCHNDLQHGNILMLTDGSVAFIDFEYAGYNPRGFDFANHFCEWMCDYNLDDCHVPRTQWHPSDEQQRRFARAYLGDGASDEEIDAIIGEAQRFSAASHLLWSMWGVVQTGTSKANSFDYAEYANQRYAGYIRSRDAYLSKESAPPHHTGLL* # PASA_UPDATE: g12803.t1, single gene model update, valid-1, status:[pasa:asmbl_9891,status:3], valid-1 # PASA_UPDATE: g12803.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9888,status:3], valid-1 # PASA_UPDATE: g12803.t1.4.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9890,status:3], valid-1 # PASA_UPDATE: g12803.t1.2.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9894,status:12], valid-1 # PASA_UPDATE: g12803.t1.3.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9893,status:12], valid-1 # PASA_UPDATE: g12803.t1.5.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9889,status:12], valid-1 # PASA_UPDATE: g12803.t1.6.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9892,status:12],[pasa:asmbl_9902,status:13], valid-1 NODE_89_length_41992_cov_43.0583 . gene 27414 31729 . + . ID=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . mRNA 27414 31729 . + . ID=g12803.t1;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27414 27557 . + . ID=g12803.t1.utr5p1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 27414 28379 . + . ID=g12803.t1.exon1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.exon2;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.exon3;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.exon4;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 29885 29965 . + . ID=g12803.t1.exon5;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 29885 29965 . + 1 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 30137 30263 . + . ID=g12803.t1.exon6;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 30137 30263 . + 1 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.exon7;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 30601 30748 . + . ID=g12803.t1.exon8;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 30601 30748 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.exon9;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 30932 31077 . + 2 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 31182 31304 . + . ID=g12803.t1.exon10;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 31182 31304 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . exon 31468 31729 . + . ID=g12803.t1.exon11;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . CDS 31468 31698 . + 0 ID=cds.g12803.t1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31699 31729 . + . ID=g12803.t1.utr3p1;Parent=g12803.t1 NODE_89_length_41992_cov_43.0583 . mRNA 27414 31729 . + . ID=g12803.t1.1.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27414 27557 . + . ID=g12803.t1.1.5b6be70c.utr5p1;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27414 28379 . + . ID=g12803.t1.1.5b6be70c.exon1;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.1.5b6be70c.exon2;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.1.5b6be70c.exon3;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.1.5b6be70c.exon4;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 29965 . + . ID=g12803.t1.1.5b6be70c.exon5;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 29965 . + 1 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30137 30263 . + . ID=g12803.t1.1.5b6be70c.exon6;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30137 30263 . + 1 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.1.5b6be70c.exon7;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30759 . + . ID=g12803.t1.1.5b6be70c.exon8;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30759 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.1.5b6be70c.exon9;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 30970 . + 0 ID=cds.g12803.t1.1.5b6be70c;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31304 . + . ID=g12803.t1.1.5b6be70c.exon10;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31468 31729 . + . ID=g12803.t1.1.5b6be70c.exon11;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 30971 31077 . + . ID=g12803.t1.1.5b6be70c.utr3p1;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31182 31304 . + . ID=g12803.t1.1.5b6be70c.utr3p2;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31468 31729 . + . ID=g12803.t1.1.5b6be70c.utr3p3;Parent=g12803.t1.1.5b6be70c NODE_89_length_41992_cov_43.0583 . mRNA 27414 31729 . + . ID=g12803.t1.4.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27414 27557 . + . ID=g12803.t1.4.5b6be70c.utr5p1;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27414 28379 . + . ID=g12803.t1.4.5b6be70c.exon1;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.4.5b6be70c.exon2;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.4.5b6be70c.exon3;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.4.5b6be70c.exon4;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 30263 . + . ID=g12803.t1.4.5b6be70c.exon5;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 30263 . + 1 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.4.5b6be70c.exon6;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30748 . + . ID=g12803.t1.4.5b6be70c.exon7;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30748 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.4.5b6be70c.exon8;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 31077 . + 2 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31304 . + . ID=g12803.t1.4.5b6be70c.exon9;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 31182 31304 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31468 31729 . + . ID=g12803.t1.4.5b6be70c.exon10;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 31468 31698 . + 0 ID=cds.g12803.t1.4.5b6be70c;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31699 31729 . + . ID=g12803.t1.4.5b6be70c.utr3p1;Parent=g12803.t1.4.5b6be70c NODE_89_length_41992_cov_43.0583 . mRNA 27432 31418 . + . ID=g12803.t1.2.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27432 27557 . + . ID=g12803.t1.2.5b6be70c.utr5p1;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27432 28379 . + . ID=g12803.t1.2.5b6be70c.exon1;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.2.5b6be70c.exon2;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.2.5b6be70c.exon3;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.2.5b6be70c.exon4;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 29965 . + . ID=g12803.t1.2.5b6be70c.exon5;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 29965 . + 1 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30137 30263 . + . ID=g12803.t1.2.5b6be70c.exon6;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30137 30263 . + 1 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.2.5b6be70c.exon7;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30759 . + . ID=g12803.t1.2.5b6be70c.exon8;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30759 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.2.5b6be70c.exon9;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 30970 . + 0 ID=cds.g12803.t1.2.5b6be70c;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31418 . + . ID=g12803.t1.2.5b6be70c.exon10;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 30971 31077 . + . ID=g12803.t1.2.5b6be70c.utr3p1;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31182 31418 . + . ID=g12803.t1.2.5b6be70c.utr3p2;Parent=g12803.t1.2.5b6be70c NODE_89_length_41992_cov_43.0583 . mRNA 27432 31729 . + . ID=g12803.t1.3.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27432 27557 . + . ID=g12803.t1.3.5b6be70c.utr5p1;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27432 28379 . + . ID=g12803.t1.3.5b6be70c.exon1;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.3.5b6be70c.exon2;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.3.5b6be70c.exon3;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.3.5b6be70c.exon4;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 30263 . + . ID=g12803.t1.3.5b6be70c.exon5;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 30263 . + 1 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.3.5b6be70c.exon6;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30759 . + . ID=g12803.t1.3.5b6be70c.exon7;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30759 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.3.5b6be70c.exon8;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 30970 . + 0 ID=cds.g12803.t1.3.5b6be70c;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31304 . + . ID=g12803.t1.3.5b6be70c.exon9;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31468 31729 . + . ID=g12803.t1.3.5b6be70c.exon10;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 30971 31077 . + . ID=g12803.t1.3.5b6be70c.utr3p1;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31182 31304 . + . ID=g12803.t1.3.5b6be70c.utr3p2;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31468 31729 . + . ID=g12803.t1.3.5b6be70c.utr3p3;Parent=g12803.t1.3.5b6be70c NODE_89_length_41992_cov_43.0583 . mRNA 27414 31418 . + . ID=g12803.t1.5.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27414 27557 . + . ID=g12803.t1.5.5b6be70c.utr5p1;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27414 28379 . + . ID=g12803.t1.5.5b6be70c.exon1;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.5.5b6be70c.exon2;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.5.5b6be70c.exon3;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.5.5b6be70c.exon4;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 29965 . + . ID=g12803.t1.5.5b6be70c.exon5;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 29965 . + 1 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30137 30263 . + . ID=g12803.t1.5.5b6be70c.exon6;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30137 30263 . + 1 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.5.5b6be70c.exon7;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30748 . + . ID=g12803.t1.5.5b6be70c.exon8;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30748 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.5.5b6be70c.exon9;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 31077 . + 2 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31418 . + . ID=g12803.t1.5.5b6be70c.exon10;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 31182 31316 . + 0 ID=cds.g12803.t1.5.5b6be70c;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31317 31418 . + . ID=g12803.t1.5.5b6be70c.utr3p1;Parent=g12803.t1.5.5b6be70c NODE_89_length_41992_cov_43.0583 . mRNA 27414 31729 . + . ID=g12803.t1.6.5b6be70c;Parent=g12803;Name=g12803.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27414 27557 . + . ID=g12803.t1.6.5b6be70c.utr5p1;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 27414 28379 . + . ID=g12803.t1.6.5b6be70c.exon1;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 27558 28379 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 28465 29085 . + . ID=g12803.t1.6.5b6be70c.exon2;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 28465 29085 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29237 29490 . + . ID=g12803.t1.6.5b6be70c.exon3;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29237 29490 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29622 29666 . + . ID=g12803.t1.6.5b6be70c.exon4;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29622 29666 . + 1 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 29885 30263 . + . ID=g12803.t1.6.5b6be70c.exon5;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 29885 30263 . + 1 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30412 30495 . + . ID=g12803.t1.6.5b6be70c.exon6;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30412 30495 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30601 30748 . + . ID=g12803.t1.6.5b6be70c.exon7;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30601 30748 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 30932 31077 . + . ID=g12803.t1.6.5b6be70c.exon8;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 30932 31077 . + 2 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . exon 31182 31729 . + . ID=g12803.t1.6.5b6be70c.exon9;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . CDS 31182 31316 . + 0 ID=cds.g12803.t1.6.5b6be70c;Parent=g12803.t1.6.5b6be70c NODE_89_length_41992_cov_43.0583 . three_prime_UTR 31317 31729 . + . ID=g12803.t1.6.5b6be70c.utr3p1;Parent=g12803.t1.6.5b6be70c #PROT g12803.t1 g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHFNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFENFHHLYTQLSFLKVACLDGFRKDTQRLYREHLQSYVLGILGSPLEKLSKFFEGVQRLVDSGVKEDEVGYQLAFSKQELKKVIREYPAKELRKGLTSMHRKLERHLSEEESLHQVVWRSVQEEFIGQCKTFEALIERCYPGAAIRLEFTIEDLLGYFTEIGSKSSH* #PROT g12803.t1.1.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHFNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFGEGNKISIICTRSSHS* #PROT g12803.t1.4.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHLYQPSASSCIAASSVCLSRSVWSFLAMRKDANDFTARLAFAPFCTFCHFVSLSHSPGSNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFENFHHLYTQLSFLKVACLDGFRKDTQRLYREHLQSYVLGILGSPLEKLSKFFEGVQRLVDSGVKEDEVGYQLAFSKQELKKVIREYPAKELRKGLTSMHRKLERHLSEEESLHQVVWRSVQEEFIGQCKTFEALIERCYPGAAIRLEFTIEDLLGYFTEIGSKSSH* #PROT g12803.t1.2.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHFNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFGEGNKISIICTRSSHS* #PROT g12803.t1.3.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHLYQPSASSCIAASSVCLSRSVWSFLAMRKDANDFTARLAFAPFCTFCHFVSLSHSPGSNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFGEGNKISIICTRSSHS* #PROT g12803.t1.5.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHFNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFENFHHLYTQLSFLKVACLDGFRKDTQRLYREHLQSYVLGILGSPLEKLSKFFEGVQRLVDSGVKEDEVGYQLAFSKQELKKVIREYPAKEVCR* #PROT g12803.t1.6.5b6be70c g12803 MERLRRLQAEVFGATSDKVVAVLSVTTSAGAKKKLGKKGNKPNLLCATVRDRTAPHVHRLKASGATFKKKETWPLQDLRSIDGRSENEENAEFVLVFGDRPTKWRASSVTERNAFLAVLFKLCGVLTGARPTLKNINMDKLHGFVETSKAIASGAEAEGAVDAVAAAYVDDYRELTAQEEADVVTLITSCDWAIHDAEAFAEHLTGELHALDGANIHAILESEAQVERLMHYLDKAAGELSRVEGVLSGYERLLTKTRREVEQMERTHEQNQTQSENHGRLVTELAGLLTALDMPAWVTEALDKGDLTHPASLSKCIAGSQLLRAALDTKMRPELAQLDAVRASRDHFETIQRVFLGRVVSHFQQLFTRRGGEGSDSLGSHVHRHRNFLAYAQLAEWLRQTDAAQFDSLRMEYSRNLNKAYRQDVRDLIERLRGFAKSGGWSFGDGAEAQATAIPESHSVGDLAGGSSGGDKEYAKIKFEQAFEQLLSQLIPAMIGEQDFCAEFFGLDVSENSAPPASFASVSALVASALQASPGSPPSSPKRLSGMRSPWTAVKSKLSDIAQKDSPTPANDKPKSDADARKMMAVVFNGIEGDLIGVIELGDKADHLYQPSASSCIAASSVCLSRSVWSFLAMRKDANDFTARLAFAPFCTFCHFVSLSHSPGSNSLCMMVKIDHYLGLVKGKSGFMSAMLGKFQIIVKRNFDLFISEQQQLIRDARASKKKYAGILPFVRKFPAFVSHAETIVVGWERRALIEQAYLDMSETIVKGIQQQALEAKHGDVLRFENFHHLYTQLSFLKVACLDGFRKDTQRLYREHLQSYVLGILGSPLEKLSKFFEGVQRLVDSGVKEDEVGYQLAFSKQELKKVIREYPAKEVCR* # PASA_UPDATE: g12801.t1, single gene model update, valid-1, status:[pasa:asmbl_9887,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 24467 26428 . + . ID=g12801;Name=g12801.t1 NODE_89_length_41992_cov_43.0583 . mRNA 24467 26428 . + . ID=g12801.t1;Parent=g12801;Name=g12801.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 24467 24785 . + . ID=g12801.t1.utr5p1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . exon 24467 24938 . + . ID=g12801.t1.exon1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . CDS 24786 24938 . + 0 ID=cds.g12801.t1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . exon 25074 25469 . + . ID=g12801.t1.exon2;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . CDS 25074 25469 . + 0 ID=cds.g12801.t1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . exon 25577 25654 . + . ID=g12801.t1.exon3;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . CDS 25577 25654 . + 0 ID=cds.g12801.t1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . exon 25764 26428 . + . ID=g12801.t1.exon4;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . CDS 25764 25961 . + 0 ID=cds.g12801.t1;Parent=g12801.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 25962 26428 . + . ID=g12801.t1.utr3p1;Parent=g12801.t1 #PROT g12801.t1 g12801 MGLLRLSSWLFRVVPFGGWIGQCCRRLKRRLWPTQANAALLPAHHGHETTMDGSISDDWDEWHDMEGGRSPPQLLPARDAPSEQSHRQHSAVVVDVGTHAHTHAPLRTPYAGGLGPAADHASPVAIAAQGQLPQSFVAPGQPQTHTQQPQIVPPQQQQQIQQPPEPEEDFFQDMTPVYRRPKLVVVGKDAEPSATSTSSRLSVNTGKMEAELGAWDDDEATWEAELDGATAGERADAERKRAERRQRRVEREAGVQKQQRERDAGGKLGARKIT* # ORIGINAL: g12792.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 196 3742 . + . ID=g12792;Name=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 196 3742 . + . ID=g12792.t1;Parent=g12792;Name=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 196 324 . + . ID=g12792.t1.exon1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 196 324 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 505 607 . + . ID=g12792.t1.exon2;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 505 607 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 831 939 . + . ID=g12792.t1.exon3;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 831 939 . + 2 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 1110 1179 . + . ID=g12792.t1.exon4;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 1110 1179 . + 1 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 1405 1526 . + . ID=g12792.t1.exon5;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 1405 1526 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 1642 1735 . + . ID=g12792.t1.exon6;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 1642 1735 . + 1 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 1870 2211 . + . ID=g12792.t1.exon7;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 1870 2211 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 2425 2558 . + . ID=g12792.t1.exon8;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 2425 2558 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 2734 2801 . + . ID=g12792.t1.exon9;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 2734 2801 . + 1 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 2956 3094 . + . ID=g12792.t1.exon10;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 2956 3094 . + 2 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 3262 3388 . + . ID=g12792.t1.exon11;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 3262 3388 . + 1 ID=cds.g12792.t1;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 3593 3742 . + . ID=g12792.t1.exon12;Parent=g12792.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 3593 3742 . + 0 ID=cds.g12792.t1;Parent=g12792.t1 #PROT g12792.t1 g12792 MEDADEARVLLGRAVEYCPESVELWLALARLESYENARKVLNKAREKIPTDRQIWITAAKLEEANGNDEMARKLVQRAVLVLPTVGVEIKRDEWIHDAEACEKGGSIATSQAIVAAVIGVGVEDVDRKHTWMEDAESCLARGAFHCARAIYAHALSVFQGKKKIWLKAAALEKNHGTREQLEELLQKAVKYCPAAEILWLMGAKEKWMAGDVAGARKILQLANQANPSSEEIWLAAVKLESESGEFGNARIVLENARRLAATPRVWMKSAKLEWQLGDLDRALALIAEATSKFPDYDKLYMMRGQVLAQLQRATEASEAIREGLKKCPNSIPLWLLASRHAETSGELTKARATLEKGRLKNPHTPELWLEAIRVEMRADNKAIAQTLMAKAIQDCPVSGILWAEAIFMENRPQRRQKSLDAVKKCENNVHVIVATAKMLWKEAKIDRARQWLERAVRSDPDNGDAWAAFFRFEVQHGTEAQQDDVIKRCVAADPHHGEVWCATSKAVQNWRLTPEQILKQTAVKIQVF* # PASA_UPDATE: g12807.t1, single gene model update, valid-1, status:[pasa:asmbl_9896,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 39821 40635 . + . ID=g12807;Name=g12807.t1 NODE_89_length_41992_cov_43.0583 . mRNA 39821 40635 . + . ID=g12807.t1;Parent=g12807;Name=g12807.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 39821 39907 . + . ID=g12807.t1.utr5p1;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . exon 39821 39977 . + . ID=g12807.t1.exon1;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . CDS 39908 39977 . + 0 ID=cds.g12807.t1;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . exon 40105 40348 . + . ID=g12807.t1.exon2;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . CDS 40105 40348 . + 2 ID=cds.g12807.t1;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . exon 40498 40635 . + . ID=g12807.t1.exon3;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . CDS 40498 40609 . + 1 ID=cds.g12807.t1;Parent=g12807.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 40610 40635 . + . ID=g12807.t1.utr3p1;Parent=g12807.t1 #PROT g12807.t1 g12807 MAKLFEDSFAVKDIDPDGKKFDRVSRIHCRGENHEMDLVLDVNTQLYPMGLNDRFTLVLANTLNEDGTLDDGTFDATGRRSLADQFEYVMYGRVYRCDEEDKDKLSVYISFGGLLMRLKGDARSLQAIELDSTLYLLVRKV* # PASA_UPDATE: g12808.t1, single gene model update, valid-1, status:[pasa:asmbl_9899,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 40698 41703 . - . ID=g12808;Name=g12808.t1 NODE_89_length_41992_cov_43.0583 . mRNA 40698 41703 . - . ID=g12808.t1;Parent=g12808;Name=g12808.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 41680 41703 . - . ID=g12808.t1.utr5p1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . exon 41477 41703 . - . ID=g12808.t1.exon1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . CDS 41477 41679 . - 0 ID=cds.g12808.t1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . exon 41222 41357 . - . ID=g12808.t1.exon2;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . CDS 41222 41357 . - 1 ID=cds.g12808.t1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . exon 40910 41128 . - . ID=g12808.t1.exon3;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . CDS 40910 41128 . - 0 ID=cds.g12808.t1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . exon 40698 40773 . - . ID=g12808.t1.exon4;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . CDS 40738 40773 . - 0 ID=cds.g12808.t1;Parent=g12808.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 40698 40737 . - . ID=g12808.t1.utr3p1;Parent=g12808.t1 #PROT g12808.t1 g12808 MAPTAEVECVSGVAAPAAAAEANLRSMPFATDSDKAAWVAAMRLRFCAQKEFPETANMVLADGSLNREYFRTRIAKQKERKWTDVERRLLLEGIAKHGIGHFGDIAADTLSEWSAHDLRLKTQKVMGRQNLALYKGWKGDEAAVLAEYERNKEIGMRLSCWKSGYLVADEAGLVERELARIHGVHEGDRDAKRARTE* # PASA_UPDATE: g12802.t1, single gene model update, valid-1, status:[pasa:asmbl_9898,status:12], valid-1 NODE_89_length_41992_cov_43.0583 . gene 26203 27270 . - . ID=g12802;Name=g12802.t1 NODE_89_length_41992_cov_43.0583 . mRNA 26203 27270 . - . ID=g12802.t1;Parent=g12802;Name=g12802.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 27186 27270 . - . ID=g12802.t1.utr5p1;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . exon 27099 27270 . - . ID=g12802.t1.exon1;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . CDS 27099 27185 . - 0 ID=cds.g12802.t1;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . exon 26720 26809 . - . ID=g12802.t1.exon2;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . CDS 26720 26809 . - 0 ID=cds.g12802.t1;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . exon 26203 26637 . - . ID=g12802.t1.exon3;Parent=g12802.t1 NODE_89_length_41992_cov_43.0583 . CDS 26203 26637 . - 0 ID=cds.g12802.t1;Parent=g12802.t1 #PROT g12802.t1 g12802 MGKWTERAYEEDLLAKIKSLFASIKEKTETDDDFTFESFVESFDEGDRFTRRLFEFLIRDAVVRRRRERRLDRVEDAQNAVIHRQLDVRWQGIGIGDDDDDDDDEGAGEGQGAQQRDFARRMRALRAQRQRLIALAERPAVSRRLRNMLAIDAPDANAAAAAAIAAVDPAARNALGRPAVDDSNNNNAASDADGGLAVGLHIV* # ORIGINAL: g12800.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 20477 24125 . - . ID=g12800;Name=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 20477 24125 . - . ID=g12800.t1;Parent=g12800;Name=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 23901 24125 . - . ID=g12800.t1.exon1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 23901 24125 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 23734 23809 . - . ID=g12800.t1.exon2;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 23734 23809 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 23451 23654 . - . ID=g12800.t1.exon3;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 23451 23654 . - 2 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 23235 23344 . - . ID=g12800.t1.exon4;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 23235 23344 . - 2 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 22991 23092 . - . ID=g12800.t1.exon5;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 22991 23092 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 22679 22900 . - . ID=g12800.t1.exon6;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 22679 22900 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 22500 22565 . - . ID=g12800.t1.exon7;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 22500 22565 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 22236 22368 . - . ID=g12800.t1.exon8;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 22236 22368 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 22053 22150 . - . ID=g12800.t1.exon9;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 22053 22150 . - 2 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 21843 21950 . - . ID=g12800.t1.exon10;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 21843 21950 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 21643 21736 . - . ID=g12800.t1.exon11;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 21643 21736 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 21397 21560 . - . ID=g12800.t1.exon12;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 21397 21560 . - 2 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 21143 21313 . - . ID=g12800.t1.exon13;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 21143 21313 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 20963 21054 . - . ID=g12800.t1.exon14;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 20963 21054 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 20736 20871 . - . ID=g12800.t1.exon15;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 20736 20871 . - 1 ID=cds.g12800.t1;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 20477 20605 . - . ID=g12800.t1.exon16;Parent=g12800.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 20477 20605 . - 0 ID=cds.g12800.t1;Parent=g12800.t1 #PROT g12800.t1 g12800 MWSSSSARGAPSRVRVSYILGDCCVDAGGVEVNGAHRLGVNATALSAPSGDGAERTLWTGGRDASVRMWAVTAQGARLKHTCSGHTDWVNAVVGAGRDGLAVSASSDASLKVWDARGVCISTMRKHDDYVRALAYSSHRHAVVSGGLDRRIIVWDITTGTGTEAKEDTAVALEMSPTVLEGHKDSVYCVAVDVAGNIIASGSPEQVVRLWDARANRKIAKLRGHLGNIRAVSLNAAGTACLSGSSDHTVRLWDLGQQRCVLTVESHTDSVWALAANGAFGRVLSGGRDRSVCATDLTSGVSRLVCRLEGPVLSLTADDRFETVWTTTPEPNVECWSVDGPPAAADVPECEHSAATDPCSEQQAQPRLATRESTPRFRLKGTPGVVQHHILNDRRHVLARDSSGSLSVWDVTQARCVRSIGVADWQKTVEELFEMTSVPGWFSVDCKTGALCINLDGSQCFAAEVYASDIGVDAPTDDAKVNLGVAVLQALFKGWREASRADTHVTAVKAIPSDSAGSAGSSDAMQPNGGKNDDEIPVYFTVPSDITVILSEENGANSIPLVRRTVAELSTEDGLRELAAFAPQWLLDCVVKGEFRQKEQKVQFLLVPQAGSGDATLPPMPEGVQSKLTAHRVLKVKRVCKYVTEKLGLQLPDDCGPDDVVEILCGDRVMPAQLNIATIRQFVWKGAGDDLTFTYRRKLTTQEDACLPTV* # ORIGINAL: g12795.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 11245 11923 . - . ID=g12795;Name=g12795.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 11245 11923 . - . ID=g12795.t1;Parent=g12795;Name=g12795.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 11700 11923 . - . ID=g12795.t1.exon1;Parent=g12795.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 11700 11923 . - 0 ID=cds.g12795.t1;Parent=g12795.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 11245 11479 . - . ID=g12795.t1.exon2;Parent=g12795.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 11245 11479 . - 1 ID=cds.g12795.t1;Parent=g12795.t1 #PROT g12795.t1 g12795 MAQFRYNLWDPVLILAQIAAMQSLFYISFGVWLGFTDSFSPGDVGLDVVFSGPSFKSKFFGWMVVAAYIFSALSCAAGELVIVRRAKQCLDYAATVHILHFIASWVYGGFPSLSWWIVNVISLAVMAIVGEYVCMRYEMTAIPLFGSRSGQR* # PASA_UPDATE: g12793.t1, single gene model update, valid-1, status:[pasa:asmbl_9897,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 3898 7507 . - . ID=g12793;Name=g12793.t1 NODE_89_length_41992_cov_43.0583 . mRNA 3898 7507 . - . ID=g12793.t1;Parent=g12793;Name=g12793.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 7291 7507 . - . ID=g12793.t1.utr5p1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . exon 6534 7507 . - . ID=g12793.t1.exon1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . CDS 6534 7290 . - 0 ID=cds.g12793.t1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . exon 5948 6359 . - . ID=g12793.t1.exon2;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . CDS 5948 6359 . - 2 ID=cds.g12793.t1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . exon 4603 5812 . - . ID=g12793.t1.exon3;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . CDS 4603 5812 . - 1 ID=cds.g12793.t1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . exon 3898 4479 . - . ID=g12793.t1.exon4;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . CDS 4234 4479 . - 0 ID=cds.g12793.t1;Parent=g12793.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 3898 4233 . - . ID=g12793.t1.utr3p1;Parent=g12793.t1 #PROT g12793.t1 g12793 MAPRLWWQRYWRTLFCVVVVLCLGIAAAVIAYNFERGSQLRDSEEHDASVFADICTAFGIQLATATRQVFAMAAVAYAQPNVTLQQFGVIAKQIIANDAYSVVSLCRFVPSDQRAAFELSIRATDGPADPTGVYTNYTINERSPANLVVNLGDRPYYTPVLYVYGHPATTIAGNDVMAVPMRNASILAACDGDKITVTGRIMAPHGSTMKAGLSMFVPSYSGVVRPTSIADRRARFHAVVMASILAETLMNRVTKSVMDSPSIGLYLFDVSDGVVPSESLLYCSADADTCTQILVPTDVHPFQGIKFSSQLSVADRQWVLVGIPLTLTARQNRSALASVVVAAMLSALGLCAVVLFTGVKLTQYLAARDKAIKEMSAAETERRIANMMMGYLCHEARNAINGIAGLVSSADEWLRDDPVTASVPANSKARADITMCGDLCMFLRRVLNDTLDIRKLEEGQLMVARNPQCAGKIAVDLRAALHSKMAEKPGVLFEIVFDPPALEAAVIECDEFRVMQVLLNLLGNAMKFTDSGSVVLSISTEAIAPRQSSQPSVQKRPVVRRTGTDTLASLRLRFVSRHADAADQSNKDSLSDTSSQVPMEELDPKMTMLVFTVTDTGRGIPADKLETLFRPFVQVDAERDGTVLGGTGLGLYLCQLLTRAMGGSITVASDPGQGSQFRVDLPMVVHCGGTGCLALPSDGVETVHIDIGELDVSAGDAADAVDRDVREAGPSHTHGSVRHLVCDDGAINRLVLRRFLERHGHVVDEADSGVAALALVAERAYDAVWMDVHMPGMDGLAATRAMRASGLTLPIIGVSGSTGVSAQDKCEAAGMTCSTPKPLARVTVDRIARAVEGARGSPGCDVIAAIRDAAAFSG* # ORIGINAL: g12806.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 38018 39546 . - . ID=g12806;Name=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 38018 39546 . - . ID=g12806.t1;Parent=g12806;Name=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 38982 39546 . - . ID=g12806.t1.exon1;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 38982 39546 . - 0 ID=cds.g12806.t1;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 38867 38883 . - . ID=g12806.t1.exon2;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 38867 38883 . - 2 ID=cds.g12806.t1;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 38405 38647 . - . ID=g12806.t1.exon3;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 38405 38647 . - 0 ID=cds.g12806.t1;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 38018 38308 . - . ID=g12806.t1.exon4;Parent=g12806.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 38018 38308 . - 0 ID=cds.g12806.t1;Parent=g12806.t1 #PROT g12806.t1 g12806 MDAAVTDGVTLRTKRRRVDDPCRPRNRCPPGASREHPGAISVDCRVLEEAAEGPIASVGNNAEPCRRSMRLAAQSHPKDVRLQEPTYTTPKDATFGTHSKDLDGVPTAQKCAMALLSPPAPPLYCVADAFLEIELALCRELAGLPLPPTVTHVYNPLEYALPTHRLYVTMYCNANIKTLFLGMNPGPFGMAQTGVPFGDPSIVRDWMRIHGHVGKPAGGEHPRRLVSGFACPRSEVSGTRLWGFIRSRWPRPGDFFQDHFVHNYCPLIFMDKSGKNVTPDQLPANTRKALFAACDKALCAVVDLLRPGTIVGIGAFAKTRADAVTRLTQCKPICSTVLHPSPASPLANRDWEGTAVRQLLALGIPIPPPVQ* # PASA_UPDATE: g12796.t1, single gene model update, valid-1, status:[pasa:asmbl_9885,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 12340 13904 . + . ID=g12796;Name=g12796.t1 NODE_89_length_41992_cov_43.0583 . mRNA 12340 13904 . + . ID=g12796.t1;Parent=g12796;Name=g12796.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 12340 12444 . + . ID=g12796.t1.utr5p1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 12340 12567 . + . ID=g12796.t1.exon1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 12445 12567 . + 0 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 12736 12803 . + . ID=g12796.t1.exon2;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 12736 12803 . + 0 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 12885 12948 . + . ID=g12796.t1.exon3;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 12885 12948 . + 1 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 13074 13150 . + . ID=g12796.t1.exon4;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 13074 13150 . + 0 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 13558 13648 . + . ID=g12796.t1.exon5;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 13558 13648 . + 1 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . exon 13777 13904 . + . ID=g12796.t1.exon6;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . CDS 13777 13869 . + 0 ID=cds.g12796.t1;Parent=g12796.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 13870 13904 . + . ID=g12796.t1.utr3p1;Parent=g12796.t1 #PROT g12796.t1 g12796 MVDEQTRTTLQRIPLLKTKAGPRDGDQWVERLKEEYASLIKYVQNNKESDNDWFRLQSNKEGTKWFGKCWYVYNLLRYEFDVQFDVPVTYPTTAPEIEIPELDGKTAKMYRGGKICLTDHFKPLWGRNVPHFGFAHALALGLGPWLAVEVPDLVDKGILVHKEKTSATPES* # PASA_UPDATE: g12799.t1, single gene model update, valid-1, status:[pasa:asmbl_9886,status:3], valid-1 NODE_89_length_41992_cov_43.0583 . gene 19610 20541 . + . ID=g12799;Name=g12799.t1 NODE_89_length_41992_cov_43.0583 . mRNA 19610 20541 . + . ID=g12799.t1;Parent=g12799;Name=g12799.t1 NODE_89_length_41992_cov_43.0583 . five_prime_UTR 19610 19666 . + . ID=g12799.t1.utr5p1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . exon 19610 19791 . + . ID=g12799.t1.exon1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . CDS 19667 19791 . + 0 ID=cds.g12799.t1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . exon 19873 20044 . + . ID=g12799.t1.exon2;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . CDS 19873 20044 . + 1 ID=cds.g12799.t1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . exon 20123 20198 . + . ID=g12799.t1.exon3;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . CDS 20123 20198 . + 0 ID=cds.g12799.t1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . exon 20294 20541 . + . ID=g12799.t1.exon4;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . CDS 20294 20409 . + 2 ID=cds.g12799.t1;Parent=g12799.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 20410 20541 . + . ID=g12799.t1.utr3p1;Parent=g12799.t1 #PROT g12799.t1 g12799 MKLSAYRLVVFAQLAFLVVDLFVNAFAGYFYDQPLVALALFILQGAAVVINIIILCLVFVNTYVFKAGLVSLLFKKYRTTLVTCTLYLLLSIALHVFTMTKIWSHKGTDVWSKGFWALYVIQKMVCAPYYYLYKRTALKMGDPRLYRDSEWLREQFSKHLNS* # PASA_UPDATE: g12805.t1, single gene model update, valid-1, status:[pasa:asmbl_9895,status:12], valid-1 NODE_89_length_41992_cov_43.0583 . gene 33721 38344 . + . ID=g12805;Name=g12805.t1 NODE_89_length_41992_cov_43.0583 . mRNA 33721 38344 . + . ID=g12805.t1;Parent=g12805;Name=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 33721 33747 . + . ID=g12805.t1.exon1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 33721 33747 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 33912 34058 . + . ID=g12805.t1.exon2;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 33912 34058 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 34139 34271 . + . ID=g12805.t1.exon3;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 34139 34271 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 34570 34765 . + . ID=g12805.t1.exon4;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 34570 34765 . + 2 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 34959 35055 . + . ID=g12805.t1.exon5;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 34959 35055 . + 1 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 35168 35240 . + . ID=g12805.t1.exon6;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 35168 35240 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 35381 35577 . + . ID=g12805.t1.exon7;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 35381 35577 . + 2 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 35772 35906 . + . ID=g12805.t1.exon8;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 35772 35906 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 36099 36202 . + . ID=g12805.t1.exon9;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 36099 36202 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 36490 36584 . + . ID=g12805.t1.exon10;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 36490 36584 . + 1 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 36842 36958 . + . ID=g12805.t1.exon11;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 36842 36958 . + 2 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 37062 37162 . + . ID=g12805.t1.exon12;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 37062 37162 . + 2 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 37251 37350 . + . ID=g12805.t1.exon13;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 37251 37350 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 37447 37544 . + . ID=g12805.t1.exon14;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 37447 37544 . + 2 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 37636 37752 . + . ID=g12805.t1.exon15;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 37636 37752 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . exon 37842 38344 . + . ID=g12805.t1.exon16;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . CDS 37842 37994 . + 0 ID=cds.g12805.t1;Parent=g12805.t1 NODE_89_length_41992_cov_43.0583 . three_prime_UTR 37995 38344 . + . ID=g12805.t1.utr3p1;Parent=g12805.t1 #PROT g12805.t1 g12805 MQTVSVGDQGESSADTAASSGRSGSSLRREVFSVHDVYVHPSSLNEDQIGGRIGLMQEDDGMHLHWTPYTFEGRDYMFVTSPESPTGVGTVRQPGEFSTATADPAQYALNIPLSELHSVRRRVPTIGWSHLVFVLRDGVTIPPLYFHGGSIGARELFMHIGQYIPLAKSPDDSGLHIVADGATDLLQRSLNELDLLPIISAVKDGSWNLLESFSKVTKLARESQAAVLHYFDPSRGPLGPSTSYPASRSFDHSAAAETVRPAASYVSARDNALDCRQQTHTDLGTFEILSQDSVSTPLPEVTRAAPVSRAVFEGFFNPDGAMNDEAAFRRAVFVGGIDPSVRVDAWKFLLGYYSSAHTKEQRIKHRDQKEAEYYKLKTQWQSISPAQEQRFAKFRDRRHRIEKDVVRTDRTHPFFDGNDNPNLRRLFEILLTYSFYDFDLGYVQGMSDLLAPILVVMDDDVDAFWCFSSVMDVMHNNFERDQNGMHTHLKRLADLLKVASPQLFRYFEEHDSSNLYFCFRWLLIMFKREFPFGDVMRLWEVCWSNHLSRHFHLFVCLAILEDHRGVIVGAEMGFDDILKYVNDLAYTLDVERVMSRAEAHFYRTAALKAPPEEIAELLVPFRKQRPQSQ* # ORIGINAL: g12794.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 9239 10783 . + . ID=g12794;Name=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 9239 10783 . + . ID=g12794.t1;Parent=g12794;Name=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 9239 9340 . + . ID=g12794.t1.exon1;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 9239 9340 . + 0 ID=cds.g12794.t1;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 9426 9610 . + . ID=g12794.t1.exon2;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 9426 9610 . + 0 ID=cds.g12794.t1;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 9700 9946 . + . ID=g12794.t1.exon3;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 9700 9946 . + 1 ID=cds.g12794.t1;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 10073 10436 . + . ID=g12794.t1.exon4;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 10073 10436 . + 0 ID=cds.g12794.t1;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 10668 10783 . + . ID=g12794.t1.exon5;Parent=g12794.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 10668 10783 . + 2 ID=cds.g12794.t1;Parent=g12794.t1 #PROT g12794.t1 g12794 MQDNAFVNCLERDFGIDLIERPMHNNVLSGFGTTNGTAHAEDMIVDERTCILLVPFSSLCDSNPSGYKAVVNVVMSLAMRFAACWVLVRQTTAASEANGYPFSGNCPHNIGMLLASLAHFGSSQSGSERVDVRVRFCHSLQHAAATVRKICEHARSASSVWSPAEWTNRQWMMREESAHETFLVGFPSINHFSAQVILTAVPRLKHILNASAVDLAAAIPWVPRTCLEAFARAVTFDGGDRALRGAANSKQSAQAHDVCHDDESGTDIDCDTTMTVPSDNSGAAAQGTRTRTRIDQVRVTERQGTRHSHRHSPLKPRPLTYVRVGTDKSGQTRLMFT* # ORIGINAL: g12798.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 16017 18957 . - . ID=g12798;Name=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 16017 18957 . - . ID=g12798.t1;Parent=g12798;Name=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 18398 18957 . - . ID=g12798.t1.exon1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 18398 18957 . - 0 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 18242 18309 . - . ID=g12798.t1.exon2;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 18242 18309 . - 1 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 18024 18154 . - . ID=g12798.t1.exon3;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 18024 18154 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 17885 17938 . - . ID=g12798.t1.exon4;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 17885 17938 . - 0 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 17708 17780 . - . ID=g12798.t1.exon5;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 17708 17780 . - 0 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 17533 17609 . - . ID=g12798.t1.exon6;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 17533 17609 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 17374 17449 . - . ID=g12798.t1.exon7;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 17374 17449 . - 0 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 16951 17250 . - . ID=g12798.t1.exon8;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 16951 17250 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 16762 16868 . - . ID=g12798.t1.exon9;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 16762 16868 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 16614 16665 . - . ID=g12798.t1.exon10;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 16614 16665 . - 0 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 16415 16528 . - . ID=g12798.t1.exon11;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 16415 16528 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 16017 16294 . - . ID=g12798.t1.exon12;Parent=g12798.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 16017 16294 . - 2 ID=cds.g12798.t1;Parent=g12798.t1 #PROT g12798.t1 g12798 MENNNVFGGVTQRVVVVPPTPSTPFNNKEAPGAVKHRLPLMEITPGNTPASMPSTTPMDTTEGNGAPTPYSQQQMKTPMRNMRLSGVDATPEMKAPRTPVPATPSENLLRLASAASPYRKEQEKQLLQLHHTQAPAQKGSRVSQKRPAEAHDDDELSAATVLTEAKRNVSRNSFSRKDKSLGLLCDKFLKFFGDGSEEEISLDVAATKLGVERRRIYDIVNVLESIEIVSRKAKNCYTWCGMDNLPHTLAKLKAIALAEDEGGKSDDAVMKDDEDDADNDCSEPGAHGKSRANSDASETMRREKSLGILSQKFVMLFLKSKGKDVSLDEASKLLLGDHADDAAKLKTKVRRLYDIANILASLNLIEKVQLTDCRTRKPAFRWVGEDPVAIDAGTVISPVAPRMQPSSKRAGPGPTQVQKGKGKGAQSAASAQAVPKKRTRDEKMVEDAEVVDEDESKRPGKLPRILPKDNTPPAPLPASDTTASRIPRDSAPSPTFAVPALPVLPANHLGRSLDDVNRHFQQQLELVNREAMNGYYEKVKELESLYAAAVRKLETQCGIVRTNSDQPVPGPPARLPSPRSARLPGWSTDRPSSPPVQQVQPSDRVVDSPASRRTQEDDEAEEAESDIDV* # ORIGINAL: g12804.t1 original gene structure, not modified by PASA NODE_89_length_41992_cov_43.0583 AUGUSTUS gene 32158 33143 . - . ID=g12804;Name=g12804.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS mRNA 32158 33143 . - . ID=g12804.t1;Parent=g12804;Name=g12804.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 32995 33143 . - . ID=g12804.t1.exon1;Parent=g12804.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 32995 33143 . - 0 ID=cds.g12804.t1;Parent=g12804.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS exon 32158 32902 . - . ID=g12804.t1.exon2;Parent=g12804.t1 NODE_89_length_41992_cov_43.0583 AUGUSTUS CDS 32158 32902 . - 1 ID=cds.g12804.t1;Parent=g12804.t1 #PROT g12804.t1 g12804 MNPTHNSGGFRSASETFDFVCVSESYIDPAYEFEAPKWMDLRDDDMPDRGDYSDDWFTSHHRSHEGPLRDPVPLLSPASMASRNRIDHVTHTMPASPAERHGAVSSAFDTLTDTFEGKQHSPPPESAFTDDAGSVDEELARLLQEHNMRVAGIQPATKIPDAETCLGAPVATRKPLADMDANRNTRHNINAPLALPTPIACGRERFPSTARTGAVTGGSRGILCNAKSRGTAVHSDNVANEDDEIMSLLAAHNKRVVESAALCDENGHLKTRAAQANFCAAPTTLRAATAKRPLPVG* # PASA_UPDATE: g4101.t1, single gene model update, valid-1, status:[pasa:asmbl_6291,status:12], valid-1 NODE_3602_length_3130_cov_39.9444 . gene 216 3051 . + . ID=g4101;Name=g4101.t1 NODE_3602_length_3130_cov_39.9444 . mRNA 216 3051 . + . ID=g4101.t1;Parent=g4101;Name=g4101.t1 NODE_3602_length_3130_cov_39.9444 . five_prime_UTR 216 216 . + . ID=g4101.t1.utr5p1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 216 383 . + . ID=g4101.t1.exon1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 217 383 . + 0 ID=cds.g4101.t1;Parent=g4101.t1;5_prime_partial=true NODE_3602_length_3130_cov_39.9444 . exon 603 767 . + . ID=g4101.t1.exon2;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 603 767 . + 1 ID=cds.g4101.t1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 1102 1234 . + . ID=g4101.t1.exon3;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 1102 1234 . + 1 ID=cds.g4101.t1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 1514 1676 . + . ID=g4101.t1.exon4;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 1514 1676 . + 0 ID=cds.g4101.t1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 1983 2152 . + . ID=g4101.t1.exon5;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 1983 2152 . + 2 ID=cds.g4101.t1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 2469 2678 . + . ID=g4101.t1.exon6;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 2469 2678 . + 0 ID=cds.g4101.t1;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . exon 2941 3051 . + . ID=g4101.t1.exon7;Parent=g4101.t1 NODE_3602_length_3130_cov_39.9444 . CDS 2941 3051 . + 0 ID=cds.g4101.t1;Parent=g4101.t1;3_prime_partial=true #PROT g4101.t1 g4101 HYGCPFSRTEEGKIYQRPFGGQSLEYGKGGQAHRCCAVADRTGHALLHTLYGQSLRYDTTYFVEYFALDLIMEGDECRGVIALNMEDGTLHRFRSANTVLATGGYGRAYFSCTSAHTCTGDGNAMVTRAGLPLEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSQGERFMERYAPSAKDLASRDVVSRAMTVEIREGRGCGPEKDHVYLQLSHLPAEILHERLPGISETASIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVIDHRKGSDVVIKGLYAAGEAACASVHGANRLGANSLLDIIVFGRACANHIATVSKPGETQKPLPAGAGEASIANIDKLRNANGSTPTAALRLKMQKVMQNNAAVFR # PASA_UPDATE: g13248.t1, single gene model update, valid-1, status:[pasa:asmbl_5893,status:12],[pasa:asmbl_5894,status:13], valid-1 # PASA_UPDATE: g13248.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5892,status:12], valid-1 NODE_3328_length_3721_cov_46.0145 . gene 1212 2896 . - . ID=g13248;Name=g13248.t1 NODE_3328_length_3721_cov_46.0145 . mRNA 1212 2896 . - . ID=g13248.t1;Parent=g13248;Name=g13248.t1 NODE_3328_length_3721_cov_46.0145 . five_prime_UTR 2862 2896 . - . ID=g13248.t1.utr5p1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . exon 2772 2896 . - . ID=g13248.t1.exon1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . CDS 2772 2861 . - 0 ID=cds.g13248.t1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . exon 2460 2550 . - . ID=g13248.t1.exon2;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . CDS 2460 2550 . - 0 ID=cds.g13248.t1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . exon 2075 2145 . - . ID=g13248.t1.exon3;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . CDS 2075 2145 . - 2 ID=cds.g13248.t1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . exon 1212 1708 . - . ID=g13248.t1.exon4;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . CDS 1553 1708 . - 0 ID=cds.g13248.t1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . three_prime_UTR 1212 1552 . - . ID=g13248.t1.utr3p1;Parent=g13248.t1 NODE_3328_length_3721_cov_46.0145 . mRNA 1422 2896 . - . ID=g13248.t1.1.5b6be70b;Parent=g13248;Name=g13248.t1 NODE_3328_length_3721_cov_46.0145 . five_prime_UTR 2772 2896 . - . ID=g13248.t1.1.5b6be70b.utr5p1;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . five_prime_UTR 2273 2550 . - . ID=g13248.t1.1.5b6be70b.utr5p2;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . exon 2772 2896 . - . ID=g13248.t1.1.5b6be70b.exon1;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . exon 2075 2550 . - . ID=g13248.t1.1.5b6be70b.exon2;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . CDS 2075 2272 . - 0 ID=cds.g13248.t1.1.5b6be70b;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . exon 1422 1708 . - . ID=g13248.t1.1.5b6be70b.exon3;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . CDS 1553 1708 . - 0 ID=cds.g13248.t1.1.5b6be70b;Parent=g13248.t1.1.5b6be70b NODE_3328_length_3721_cov_46.0145 . three_prime_UTR 1422 1552 . - . ID=g13248.t1.1.5b6be70b.utr3p1;Parent=g13248.t1.1.5b6be70b #PROT g13248.t1 g13248 MESSTEHDHVDNAPTSASTPTAPLMPAVPTYGPCTLRNIEPGKKYMWCACGLSKKQPWCDGSHKGTSFKPLVWTAPEKPQTLYQLCACKYTKAPPFCDATHTNLPMEVLDRQDHCQQPHDGTRRLCEGCGWVPEW* #PROT g13248.t1.1.5b6be70b g13248 MHLHLIVTYTNARVSRVGSVAQWRASLLRASQPYHESSPVIAGSHKGTSFKPLVWTAPEKPQTLYQLCACKYTKAPPFCDATHTNLPMEVLDRQDHCQQPHDGTRRLCEGCGWVPEW* # ORIGINAL: g11729.t1 original gene structure, not modified by PASA NODE_1989_length_8187_cov_39.1298 AUGUSTUS gene 2371 7734 . - . ID=g11729;Name=g11729.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS mRNA 2371 7734 . - . ID=g11729.t1;Parent=g11729;Name=g11729.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS exon 2371 7734 . - . ID=g11729.t1.exon1;Parent=g11729.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS CDS 2371 7734 . - 0 ID=cds.g11729.t1;Parent=g11729.t1 #PROT g11729.t1 g11729 MFGEKAPPRPDPNEAILEFTVGLCEYMGSLIAEIPSDVSAISDGKKHSLVTCLSRFRFSTRLFGWMYEEGTVHRDTALRWMCDVLRTATGPRQTGLVASLVLPYAQEMSKSNTFASLLLAETTSKLRLIADAVRAEDDIGRKVARGSIDAMKAIGRTVLLLSPSVVSADVLQAAGSIEWRQTCASLRPQHAEADAALDAAIEACITCHVERVQDSDNAITFDESGTPCASASGVSLECARILHALASFPSLPKEEFASNSAAGVTPLERLRRIASSQSATVVGGAGASPDVPSYTNSDKSPLLADPNHVPVLLEWVLTSSCATGVDYHVMLVAVVLGADSLMRAVRSGGSGGSSIPGVTGGAVNGGAGNGHTVEGGMVSDRMPNTAPRPRDVRQYLPLQLPVVRFMDSLFGANGCEMSGTVMWRVTAVVGELMRANLFSHDAYVRWLIARGDIEKRNSDARARKHVWVASRLPVFSSSPLYRHEVNQKRVSLGRCIDGSAESLKLRRAASLCREHVRSALSCSPASVSADLELARFRSSLVPCVEFDVEDVDAVGFGGEGASRACAVKNASRVAAESLTRSDQLSLSDWIISSIKGAVANGGPPSLSADLFLAVMNVVDWCGDSVGGTGVVTWALEMVSATAAARQSSAHSQTMHTSESSPLAQSACDGMWGRLACAVLAWTRKIAPCIACDDALLHSCFLHLSSLAGDGRSMSRDQVQRVSAMLASELYSVHAHLQTAFPNYTQCDAIVRRFKLDAVPPPPASSSSSSSSLQSGGIDLKDKGHATAVFDPPGNIDTALAAIQSECKGREGLLRYLHGALLNAAASTPIVSRALSELSLRGNPTPVVVQLISQVLGRGDVVIGSLELGRFCALCVSVGAAPLSSLVTDSLFPNLANVLRALQQSGGDNTPLRRRLRLCLAVASALLTDHHIVGIQPTVGSLGLLTLTAERTSLHPDAAIEALLGMLTVQKALSGRATTPTVDNVSLVGETDRVISSLVAQPWVRTAVMRDPLAFYMDHLAPACAKGKVSAIMARRTFRALRLGASLVLHDGPPSLVASASAAALAASFQSATTTPSLPAQPLSVVGCEAAVAEASEAPGLLIGSGAWIELRLFADACEEAARSVSPQSQQAELASWIGGDIAKILLRRFLSPVLCVPAMRGTADARKDVENTLRSSPLLRFSHLLGGLLQEALLNRTIGLVAGAKWWARSLAVSVRDLMGGHVQPWSLEGAVVLPDLSRREEIDSASAERENAQSIAAADSEALLLEAIGSISSACIVRASKEVRHHISSVLLNDVLCLLAATRISPPTMTTTTTKSCDPMMFAAIEEVGGAEDCNLRSRTEVTSIAGAARDALVLRLRLALLSGQSLSESHDGGWISASLSLLASGAVVDATNEDDAVARACIACLSVFLSNERADHQSCVGAPSSQQQPPARASSASGASSTVSTTGHSATHLQKDRLMQQWQSIVEGLHPQLRRRCAPYFPPVAAVRTAYSVSAVSHAGELGDERLVSNGRVVTPAEAHLLPHPPCVNVRPWECMDHIESRTKGAVLPPLTLQMFGSVRVPKGSLRFAETARLASSIGHVHPPAARILTTTVQIGGGGGGGGSNDGADTPTLLGSRSRNSFQSPSSVSQGGLYGMGAALSPAPPALSPPAVASPAGIMAQAQQQHMRAQFVANNNNGNSNNGNTNATLGASAVPTPPVIPGVQGYSTLPDHVIQIIAKSKGSSFYAGQQGGVGSNAGSNVGSNAGSNPGSNKAQFTSEAAAVGGGKRSADEPSEGPPGKSRKLG* # ORIGINAL: g11728.t1 original gene structure, not modified by PASA NODE_1989_length_8187_cov_39.1298 AUGUSTUS gene 189 1738 . - . ID=g11728;Name=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS mRNA 189 1738 . - . ID=g11728.t1;Parent=g11728;Name=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS exon 1607 1738 . - . ID=g11728.t1.exon1;Parent=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS CDS 1607 1738 . - 0 ID=cds.g11728.t1;Parent=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS exon 1210 1440 . - . ID=g11728.t1.exon2;Parent=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS CDS 1210 1440 . - 0 ID=cds.g11728.t1;Parent=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS exon 189 958 . - . ID=g11728.t1.exon3;Parent=g11728.t1 NODE_1989_length_8187_cov_39.1298 AUGUSTUS CDS 189 958 . - 0 ID=cds.g11728.t1;Parent=g11728.t1 #PROT g11728.t1 g11728 MASAGERDAAVIDTVRSLYADLGTVPLVSQATLVNNKTISVIAKERDLVRNCYRTLQYYVGFDASKDAPSVWQSPFPVDYNDVAASTVSPSGNRMVIVRRIAAKDPKSRKDGKDQFVEVYENGRLVKSIGADSKHEQIYSPEDTFGTLQWSRDERRILYTAETQGPKVTSFWEKQEASKTDNNNNNNNNSDNNKGCDPTDSSNKEDSANGISKGDKKADDAKKPPRGSKYEFKEEWGEQQVNSSRPRPVILDLDTEEFSVFDWLPENISYGQAVFAPVTESGQREDSIVVVGWSTGHRRLGVKFCFNRDYGLYVVPIGGVDQKGEVALKRVEGVQWPARTPMFTPTGDALLFLETDAVGAHNSCNRLARVDWPSMGN # ORIGINAL: g13036.t1 original gene structure, not modified by PASA NODE_3156_length_4156_cov_32.4563 AUGUSTUS gene 277 2872 . + . ID=g13036;Name=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS mRNA 277 2872 . + . ID=g13036.t1;Parent=g13036;Name=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 277 354 . + . ID=g13036.t1.exon1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 277 354 . + 2 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 696 812 . + . ID=g13036.t1.exon2;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 696 812 . + 2 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 1196 1492 . + . ID=g13036.t1.exon3;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 1196 1492 . + 2 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 1701 1809 . + . ID=g13036.t1.exon4;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 1701 1809 . + 2 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 2103 2201 . + . ID=g13036.t1.exon5;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 2103 2201 . + 1 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 2502 2611 . + . ID=g13036.t1.exon6;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 2502 2611 . + 1 ID=cds.g13036.t1;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS exon 2832 2872 . + . ID=g13036.t1.exon7;Parent=g13036.t1 NODE_3156_length_4156_cov_32.4563 AUGUSTUS CDS 2832 2872 . + 2 ID=cds.g13036.t1;Parent=g13036.t1 #PROT g13036.t1 g13036 NPDKTSELMDTITCIEFAETYLHLDDMFLSPTLLLGSAQGGIFTFQLAPMSSSVPNTARYTPNLISFEYFKNPVNILNMYVLDRKGRQQIAPSGEPGELNARSDPPPPLPTTQARTDSERQYLFLVIVATDGVRTVHIPSGTRLHKADVKAGVILSSGIIECGVETCIAYLTSMGHVVVHGLVNLRPLVDVALGAAKASWNLEYTPIARDGRIFLLSDHRYFHRLSILLGENGLNLPRSLARAYNPSLGVPAKPQSFLGGNKGAQRNQLIANQSSGPGKLQN* # ORIGINAL: g793.t1 original gene structure, not modified by PASA NODE_3263_length_3886_cov_46.5565 AUGUSTUS gene 2439 3629 . + . ID=g793;Name=g793.t1 NODE_3263_length_3886_cov_46.5565 AUGUSTUS mRNA 2439 3629 . + . ID=g793.t1;Parent=g793;Name=g793.t1 NODE_3263_length_3886_cov_46.5565 AUGUSTUS exon 2439 3629 . + . ID=g793.t1.exon1;Parent=g793.t1 NODE_3263_length_3886_cov_46.5565 AUGUSTUS CDS 2439 3629 . + 0 ID=cds.g793.t1;Parent=g793.t1 #PROT g793.t1 g793 MGDEVRLSDSGAFSPALSPHSRVRSTALRADSNTWAAARQPPIARRRESIDSERRTSGGGLFAKARSALSVRSVRNLFSPSSASLPRGSDMYSDAPQRASVAAAMAIDMTEEGFDAPSATREEAEESVVVNVVDQNNGSYADMRVGNTEFETNDAEYKTDGPSYRSDIASPSGATVSNRSRRVGPSGMRKIFAGRKSEADGYRLNVRTLHLEPKSIEREFSQRLCRLNMRMARQSRWIYIAMLLFYTIATFIDSDLHPALLTIGLATALVIMCMTYIYQKFPILKTVFFTELILLTTVFGCVCVFIAYRIVVPERNNEIDVPMLAFNILGTTLFQLRFPTATVFSCLLLLTDCLLSLKLGTHPVTAMRLRSCVAHMAVMMAGVCINYANQRYLRER* # ORIGINAL: g3590.t1 original gene structure, not modified by PASA NODE_746_length_18202_cov_48.5669 AUGUSTUS gene 15746 18044 . - . ID=g3590;Name=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS mRNA 15746 18044 . - . ID=g3590.t1;Parent=g3590;Name=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 17712 18044 . - . ID=g3590.t1.exon1;Parent=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 17712 18044 . - 0 ID=cds.g3590.t1;Parent=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 16597 17250 . - . ID=g3590.t1.exon2;Parent=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 16597 17250 . - 0 ID=cds.g3590.t1;Parent=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 15746 16399 . - . ID=g3590.t1.exon3;Parent=g3590.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 15746 16399 . - 0 ID=cds.g3590.t1;Parent=g3590.t1 #PROT g3590.t1 g3590 MRAKRNVVVSTAAVSTNPTIARLLSDDLPTLSIDDNTFKRADIRDFERALGSCSCVTSIELTGKQLATEIVSAVRKYIREARSGGEPVMLSVKLRKGLAELAASDILENLKDLVVGTEDVTGLERLEIKCWSIEARAAVGLKAYLSSPHCGLKELVVRRTEIKGADTPLARRLAFPPGLVELRLSGENLTLSKAYRSFAFVDILVEALPSLQNLRRLYLNGCSLTDKGIAAIAEKLAARGSATLDELDLGDNMADTDAFVQSVGFIRQMVLNARSHVGGGKDGAAVMRSVNVSCNWNGSRSHWQAEWTAGKALSDGEDSGNPGSDDDDEGFKKSKKKSKMAKKKKVKSNGDYQSVDEEAKIRRTKGGNSGAALAGLVSCTHTLDASQCWLGKRDIFALAAGIAGHAPASPIYAGAVPAPGMRLLILKKQPLNASAAHALLKALAGFPSCESLVTSEGTPWPLQALRDRRVDEWIRPVARTVAFSDIDHDLDAAEGARPMSSAGIAAANARMLARVPTLARLLTATDGYVLHAGLRIIQGDVALDMQ* # ORIGINAL: g3589.t1 original gene structure, not modified by PASA NODE_746_length_18202_cov_48.5669 AUGUSTUS gene 4383 14996 . + . ID=g3589;Name=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS mRNA 4383 14996 . + . ID=g3589.t1;Parent=g3589;Name=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 4383 4511 . + . ID=g3589.t1.exon1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 4383 4511 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 4735 4835 . + . ID=g3589.t1.exon2;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 4735 4835 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 4941 4990 . + . ID=g3589.t1.exon3;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 4941 4990 . + 1 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 5199 5266 . + . ID=g3589.t1.exon4;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 5199 5266 . + 2 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 5402 5623 . + . ID=g3589.t1.exon5;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 5402 5623 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 5849 6001 . + . ID=g3589.t1.exon6;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 5849 6001 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 6185 6398 . + . ID=g3589.t1.exon7;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 6185 6398 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 6552 10215 . + . ID=g3589.t1.exon8;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 6552 10215 . + 2 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 10449 12146 . + . ID=g3589.t1.exon9;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 10449 12146 . + 1 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 12369 12822 . + . ID=g3589.t1.exon10;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 12369 12822 . + 1 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 13008 13094 . + . ID=g3589.t1.exon11;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 13008 13094 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 13287 13910 . + . ID=g3589.t1.exon12;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 13287 13910 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 14118 14225 . + . ID=g3589.t1.exon13;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 14118 14225 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 14450 14492 . + . ID=g3589.t1.exon14;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 14450 14492 . + 0 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 14669 14782 . + . ID=g3589.t1.exon15;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 14669 14782 . + 2 ID=cds.g3589.t1;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 14950 14996 . + . ID=g3589.t1.exon16;Parent=g3589.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 14950 14996 . + 2 ID=cds.g3589.t1;Parent=g3589.t1 #PROT g3589.t1 g3589 MMCNSALSRDFCCKPQISFELRDSITLEDAAKSIHAQLKSPLDVHQLALQVAATGAYLDFDESVESQLELCGLKKRGLVVLRTRPAVRARACIAVLEEENGRILRNAVSQLGILLEEDEELLQEFVLAGGLSALAALGKCADAVVQLASMRCISDLMFYVDGMNAMMQSRELVRHLYRSATGEVPPAIAKTSLEMLVLLVDYDDANIVLVVDAAGFCARETASPIFRDLVQSIDSGDPEVALLTIVLINTLANCSDDENTFYDMTDAFELAGIADIMGRLLDDDASTPSPVADQLIFYESVLAEADAGKGLAGVCVPSRSILSPGAAEAPYKDTLNQQKVQRMLKGAAGSSIGLGANAWKLQRQSSLGSGLSDGASVRDSRDGRKWADAEGIEPQSPRLKKIMDRPGSLYGTHASSPLSSSHDGDGASGGVRMGQLLRERAQSRGKPLNAPPSHVPAHGKPCLAQSAASGPVAASDSPPMQKRRLSLRARSKSLAETPLCDLAERLASNAGGTDVDGEACPADVLAATDTAFHDGSTEVVAMSGLTAVESLVHNRVVGEVAAPVPVVSLASVGEGVADEQGAVSVWMKRQLRSIAQSKATDADIVSQIGTSDGRSSADVCLSSSCASSETGTHHSPSDVRMDVPSPPMDVVDVSLARVPMSHADDGALLAAGDHCGPLGLAHEGKQSGTHTPSPSAENVGKLASSLSDEWTSTPGSGASTAPYDLASSSLSRVFDAARLSLASNDQLRHAWSQEGRADANVDGSEIAFGLRLGTLSDSVGREVVTAVVTGSWDHVPRHDAAARGNTASAKERSAESSKIGDEVVIETLSRVPSIMSLTVSPSADTLSSPVLPIAKSLPVTGCDMESTVGASPSIDWVGNAQYIRESESEKELSPQLNLSTAPPTTSFDRTLTTAAADANTHELPGITVHVERVPSNPAPNPNPIGDAGAPKPSPSLPLKISRISSEPLVGDAISSRTSPSSPLRYHGRHSGSQSSGSSAAWSSTSRASTAPSASSGVILPRRIPRTQSLHYGQHSQFPSHTDSPPLGHDHTASEPTPSPTKHSAPASTVFCERNLERKEHARTALVTAAGGGDTDTQAAAAIATTEMIAPPVAANVHLKSLSTAESVASVTSSTDVTPAKLVQSRVSPVSSVLPSARAMRVSASVDKVALSPSCSPTAPAHALSPATASRSPRKSTCTRDVSSSVPSVKPHVAASLREALAGVGLSDRRPDAQPPSSPQTRRLPSSSPRPHAHASQASQASPADSTRADRIQRRSASGALGSARALHLSEQRSMGRSSSASLSSAAGHQARPPPSQCIAQSATGVRLPHDEPTQAKSKPVRNATHVPLSLDETPIQSLDHVVSSMQKAARAAIAAANASNAGVLSPSPSRTAARHLRTESADGSGKPVAALNASNAADGDADAMVREMRMRKSQSVQSPRAAQSAPGMRSRTLSFEDDALETLRKALRPTSPLPGSRDLARALGVTPASGSPAAGTAVARSRPGSIVLEIDETAADGEGEVVTVRLFEHKSGNGERQPMCIVEAADESGTRTPLVTGSVDRSEQTMPYVMHSRRQSVSMDGAEHLSGSFPPDADRPPSLIRLSAASSEESIPRSTASEPASALASPRGRGVANPRLRMPLDSRLELLRGLPGRIHRAHSQGLLNMSPLLREPQTYTTFGGTKVVVRGAVSHTALQLRPGADGQLLRTASDSRLSVKQLAASRIIKPSGLSAPSQSIVAMSEREGTAQDMSRELHTHPSAVITFDRETGKISIEGLPVSGRITIHRAPSTSVLSVHVDRVDQGGDRMGEDGGAVEAQLTPPYEHTSPAPLKLILRDFDFTDLLDDDDESLSGGDVSMTGSSVGPPPPPPPPHVYVGGIPPPPPPPHMSVGIPPPPPPPQMSIGVVPSPPPPQSAPLEMSVHLTHIADSQVSASLTCGAGPGGIPTPPPPPESLGSAVTVQGGQEAELEEVSGAPTSPPPPPASVTATAAASHSAGATGHAIDTSDIDAPGRASSLGDVRTGRVALQYMGDTGLIPEGASIPPPPPPPLPPSSSATRSIMTGADDDGGCALTRSYSDESGVVLLDVAVMEVGLYVSPSAESLSVPVSPAPLSPVSPAKPQESAARGSQRPHVVLRQLHWTKVATGAKKNGTVWAALAPVEIDMDHIRSLFGSEQSSGRRMSVRAADTGPKIINVLDKKRANAIAIATTRLPPARHVGDAIAAMDDTKIDREGLSRLNALLPTAEEIAAIQTAQTDAPGVALGAAEEYLMALADISELPARLKVWSYVADFADAEEAIARRLMDLKRALSELCESTSLRIVLAVVLSIGNFLNNGTNRGRADGFGVDILSRLSDTRDVAGKSTLLDLVVATVRNQHPEACALYDELHHVHRAVKSEIETIEGDIGALDANLRQCRSAVKRIAMHPTGSHYAEKLPHFLEDAGKRVAILNAVYRRVMARATKAVQYFGLAAAAAEKSRLKEFVQTVSDFAFEFKSIVRRVEQAEAAVKAKIQRSMTRGKRITLRSRESEPSGGADSATAHSTEVPRDEPEGEGLLDTVSSLLDNHARRRRKATTTGSRTSIRNALADVVPEVAVQ* # ORIGINAL: g3588.t1 original gene structure, not modified by PASA NODE_746_length_18202_cov_48.5669 AUGUSTUS gene 590 1309 . - . ID=g3588;Name=g3588.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS mRNA 590 1309 . - . ID=g3588.t1;Parent=g3588;Name=g3588.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS exon 590 1309 . - . ID=g3588.t1.exon1;Parent=g3588.t1 NODE_746_length_18202_cov_48.5669 AUGUSTUS CDS 590 1309 . - 0 ID=cds.g3588.t1;Parent=g3588.t1 #PROT g3588.t1 g3588 MPLKRQKLKETDGSPTRVSPCSLAAKLFQARQESDGAPGNHGEVNNVGESERVEKGRKRGRGDVSDDDSDVVQHVVQPAAQTGSPIASDDDSDRRGGIDSGDQSDGSDESEEVREKVVKGPTENSGRGHRAIIRKQVFAPPEQNEGGGLKGKPSRKGKGVGGKGKEIESEEENDGDAFRGGSFLDSLPKSGARGKPNATAIRGFTGVPRSAMEITLQELGGRRPQDDRDSLQESLKVGP* # ORIGINAL: g7791.t1 original gene structure, not modified by PASA NODE_1409_length_11494_cov_39.6329 AUGUSTUS gene 188 700 . - . ID=g7791;Name=g7791.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS mRNA 188 700 . - . ID=g7791.t1;Parent=g7791;Name=g7791.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 553 700 . - . ID=g7791.t1.exon1;Parent=g7791.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 553 700 . - 0 ID=cds.g7791.t1;Parent=g7791.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 188 300 . - . ID=g7791.t1.exon2;Parent=g7791.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 188 300 . - 2 ID=cds.g7791.t1;Parent=g7791.t1 #PROT g7791.t1 g7791 MDQANDRIYLGLERKFSFSGAADNFWMAVGVNTGASMIGADAFVLGTASGTPYAADFSLHAYDTCAQGGACPDSSFTSSSADNNAVQ # ORIGINAL: g7794.t1 original gene structure, not modified by PASA NODE_1409_length_11494_cov_39.6329 AUGUSTUS gene 10554 11410 . + . ID=g7794;Name=g7794.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS mRNA 10554 11410 . + . ID=g7794.t1;Parent=g7794;Name=g7794.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 10554 10802 . + . ID=g7794.t1.exon1;Parent=g7794.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 10554 10802 . + 0 ID=cds.g7794.t1;Parent=g7794.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 11096 11410 . + . ID=g7794.t1.exon2;Parent=g7794.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 11096 11410 . + 0 ID=cds.g7794.t1;Parent=g7794.t1 #PROT g7794.t1 g7794 MRLLPSPALCLRSHIRIKYIRVGLARNETTNRRGIASKASPVGHLSNYAAVKRHVTDACPSFVVRASDVHVLSSPNDFFLALKVEALGNAAGRVSGSVTVAVDFMRGSRGAVNSRTMLLPLLRRHSNVRVGLYHTPDLGRILQQIVPERFNETVGVQHIKAYVWDDTVLLSGCVHCSADCVLLVTSV* # ORIGINAL: g7793.t1 original gene structure, not modified by PASA NODE_1409_length_11494_cov_39.6329 AUGUSTUS gene 7053 9958 . + . ID=g7793;Name=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS mRNA 7053 9958 . + . ID=g7793.t1;Parent=g7793;Name=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 7053 7272 . + . ID=g7793.t1.exon1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 7053 7272 . + 0 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 7483 7658 . + . ID=g7793.t1.exon2;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 7483 7658 . + 2 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 7893 7984 . + . ID=g7793.t1.exon3;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 7893 7984 . + 0 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 8106 8201 . + . ID=g7793.t1.exon4;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 8106 8201 . + 1 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 8391 8568 . + . ID=g7793.t1.exon5;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 8391 8568 . + 1 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 8740 9023 . + . ID=g7793.t1.exon6;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 8740 9023 . + 0 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 9305 9497 . + . ID=g7793.t1.exon7;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 9305 9497 . + 1 ID=cds.g7793.t1;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 9617 9958 . + . ID=g7793.t1.exon8;Parent=g7793.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 9617 9958 . + 0 ID=cds.g7793.t1;Parent=g7793.t1 #PROT g7793.t1 g7793 MSNVYILEPPTTGKVLLVTSFGDIDIELWTKEAPLACRNFIQLCMEGYYDNTVFHRIVKGFIVQCGDPTGTGQGGESIYGGPFKDEFHQRLRFTRRGLVAMANAGPNDNQSQFFFTLDRLDDLNKKHTIFGKIGGDTIFNLLKIGEVPVVDNDRPEHPPKIIRAEILNNPFDDIEPRVTKKKAEAPQKNIRKGTKDLKLLSFGDDAEADASDEPATKPRMRSSHDVLKNDPRLRTTESVLEGDVPAGAKRPAEAEAEGGHAKVRKTTSSSALTDAKQGSTNDTEIRDGDSDVSDEESFDARMKTAILSRRDGNAKTSAASGAAADGSAPAPKTTKALPMTATDRKTAAIEASREESRKLQEEMRAAKEKARRGDVGVDAVPAATDAAIRAYEEERAKYVANKRPKSKESREEETLALLARFQTKLKSTLGSGEGQSDAIFSDGGEGAQRESNEDSKGHEDDAAGSGWLSHRLEFAQVERAAYLREGEDEFDIHDPRNPLNKRRREQTKHSGGRDKDARRDRRSRDK* # ORIGINAL: g7792.t1 original gene structure, not modified by PASA NODE_1409_length_11494_cov_39.6329 AUGUSTUS gene 1955 6526 . - . ID=g7792;Name=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS mRNA 1955 6526 . - . ID=g7792.t1;Parent=g7792;Name=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 6243 6526 . - . ID=g7792.t1.exon1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 6243 6526 . - 0 ID=cds.g7792.t1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 6017 6111 . - . ID=g7792.t1.exon2;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 6017 6111 . - 1 ID=cds.g7792.t1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 5741 5849 . - . ID=g7792.t1.exon3;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 5741 5849 . - 2 ID=cds.g7792.t1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 4686 5566 . - . ID=g7792.t1.exon4;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 4686 5566 . - 1 ID=cds.g7792.t1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 4370 4488 . - . ID=g7792.t1.exon5;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 4370 4488 . - 2 ID=cds.g7792.t1;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS exon 1955 4252 . - . ID=g7792.t1.exon6;Parent=g7792.t1 NODE_1409_length_11494_cov_39.6329 AUGUSTUS CDS 1955 4252 . - 0 ID=cds.g7792.t1;Parent=g7792.t1 #PROT g7792.t1 g7792 MGVRRGVNEAEGARGSPRSRPSGARDGAVGGRAGRPASASAPARRSLPPGVVGDARFVLRVAVPRVVWLDASREGTSVHVRLKWWGEDGDGTTFRPREPSFEAIVDGSAALFDVRCQRKQFEAYLRDMGAVVMDLIDSTTDTPLGKTRIGNLSFVARGQPFSGSFSVATPEGLKIAYLMVEMALLEPVGSIVTPREPADAPAQVPTQAAAHVPPAEQAAPRDGSDASQDVISALIGRSRQLQRELAVSADADPDRETCSFDNRHSRSLTRPHTDDADDADDIGQHRTSVGPSQSHATPAAPIALADIAGIDGDSDGAGSESSGLDDDILEELFYRVPKVVSLEKVTTRVPVVPAEGAEGNGTSAPGTRTNQNGESRREGAAAGKSVGFLGVTTLTELGRVYAARLYVDRILLGAADEGDKLDRRTYFMEYHFPIMVGDGSVKSERLRAASAKTDGKVVTLSHRGIFPVVFDAAVIDHWWTKSLSFKVLSRSPKEKTAVVLGTATFPLRSVLTAPAFSLTTRLSLTPTAASRLHVSGDRRKASPSQLELRLSLAVDGRATADRPNAAAGSTGQSQSLGLADKVVRATVSAAEDDRLDHGMTAGGVPPDAAVVPQRFSRQPVHILLEVGLVSTISGACNLYLVSRVLSLDESRTDVRWGERTPNFALSLSIPVMLAPAIVDTWRGNAVVVEVWDRTHGESLVGLARLPLHPAHLALRDPEIAASVLSAELPILTVPAGEYAVLNPFSGKEVGRMIAMVAVGTAAQVASVKGSAVRPAPNVAVQNRGQVDSLTSRRGRPQSPQPEDSDAREKVPKSRSVLSPRERSPASTHDHSLDSSPHSRSARSPASKHAYARDASPHSRSARSPAFKHAHARDASPHSRSARSPASKHAHARDASPHSRSARSSRPSYADTREVHARTRGRHSPEPRRAPTRGRSPRLRNEQTSHTYELSRDGSPSLARPELERVGARDRSPRPRSGLSPTSDSTARSPPSPSWAGESPESEHADGRDQSAQRWTTQSMQSGRTSPFSAHGSNPDVHALSEVHGRHSPLPSSVHEAANNDEGFGVAACSLSTMSSIEHLPLSPPRNNDVAVHDSPESIDWKELSEHASLHRRSPSPPVEEAAVTDASYGIDASVAHASRTASSNADAPLHASSAAASGRGPSNSAARENMGATDAQITASRSPSIGDLFPPAYRDRGALPVRSVASAMPVDQAHSRPSGSIPSPTRPLVQWPDRARVPLPQDADAELDRIRRVFAMTRMRL* # ORIGINAL: g6818.t1 original gene structure, not modified by PASA NODE_3189_length_4058_cov_37.0891 AUGUSTUS gene 261 901 . - . ID=g6818;Name=g6818.t1 NODE_3189_length_4058_cov_37.0891 AUGUSTUS mRNA 261 901 . - . ID=g6818.t1;Parent=g6818;Name=g6818.t1 NODE_3189_length_4058_cov_37.0891 AUGUSTUS exon 896 901 . - . ID=g6818.t1.exon1;Parent=g6818.t1 NODE_3189_length_4058_cov_37.0891 AUGUSTUS CDS 896 901 . - 0 ID=cds.g6818.t1;Parent=g6818.t1 NODE_3189_length_4058_cov_37.0891 AUGUSTUS exon 261 397 . - . ID=g6818.t1.exon2;Parent=g6818.t1 NODE_3189_length_4058_cov_37.0891 AUGUSTUS CDS 261 397 . - 0 ID=cds.g6818.t1;Parent=g6818.t1 #PROT g6818.t1 g6818 MPLARDLLHPNAEYEKSQHKLKRLVQSPNSYFMDVKCPGCFNITTVF # ORIGINAL: g9756.t1 original gene structure, not modified by PASA NODE_3939_length_2487_cov_34.8914 AUGUSTUS gene 248 2178 . + . ID=g9756;Name=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS mRNA 248 2178 . + . ID=g9756.t1;Parent=g9756;Name=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS exon 248 675 . + . ID=g9756.t1.exon1;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS CDS 248 675 . + 2 ID=cds.g9756.t1;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS exon 1054 1726 . + . ID=g9756.t1.exon2;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS CDS 1054 1726 . + 0 ID=cds.g9756.t1;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS exon 1910 2045 . + . ID=g9756.t1.exon3;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS CDS 1910 2045 . + 2 ID=cds.g9756.t1;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS exon 2169 2178 . + . ID=g9756.t1.exon4;Parent=g9756.t1 NODE_3939_length_2487_cov_34.8914 AUGUSTUS CDS 2169 2178 . + 1 ID=cds.g9756.t1;Parent=g9756.t1 #PROT g9756.t1 g9756 CACANGGICADGLSRDGHCDCSTVVGFSGPVCNTSCSENGKFGVNCTSNCLCQNGAICSPFTGLCTCALGWKGVYCTGVIAPSDPTNVTYRLVPKASGVSGFDMSALLEWTHPEDRGVGELSWGPWRYEIKRTGCPQTEPTIIYDARNFTDEKIGQNQLYVYSIQVFNSKEVASNIVYVIVPVYKQQKPDPPAVSATPTLTPNGLGPMIKVTWTGDTSSGRINASYVYRDGILKWGLYNETEYLDDDVVYGSTYSYGIVSENAYGKSEMTVVNVTASVSPNGPSTGATESPSSGVQAGTVAGAVVGTIGAAVIGCAAFFVWRRRAIARKREEMAMKELELIDTIIRRPEIAEIELASSSVRLRERIGEGEFGEVYRADVDLKGTGKTTIVAAVKTFKVAMLTTPEEIRSARRPA* # ORIGINAL: g14180.t1 original gene structure, not modified by PASA NODE_2806_length_5079_cov_35.8901 AUGUSTUS gene 179 2252 . - . ID=g14180;Name=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS mRNA 179 2252 . - . ID=g14180.t1;Parent=g14180;Name=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 2229 2252 . - . ID=g14180.t1.exon1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 2229 2252 . - 0 ID=cds.g14180.t1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 1895 1943 . - . ID=g14180.t1.exon2;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 1895 1943 . - 0 ID=cds.g14180.t1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 1467 1628 . - . ID=g14180.t1.exon3;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 1467 1628 . - 2 ID=cds.g14180.t1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 750 1198 . - . ID=g14180.t1.exon4;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 750 1198 . - 2 ID=cds.g14180.t1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 489 501 . - . ID=g14180.t1.exon5;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 489 501 . - 0 ID=cds.g14180.t1;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 179 252 . - . ID=g14180.t1.exon6;Parent=g14180.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 179 252 . - 2 ID=cds.g14180.t1;Parent=g14180.t1 #PROT g14180.t1 g14180 MNEAAVSLPGSRKRNAENELTKDNADKDLSDGEEVGGEFKKAAPEVLATRKLLVPSRRLKPQEEGDKAAALPAFSFFNNAPASDANQQPASAGVPAPTAAATAAATAATAPTSDAPTGVQPPAFKFPPFPSSLGGSTGTPSLFPGLSTGGALPTFSFTSTASTFKNPWASASTTASASGGNMFSFLKTPAATSGPGIFSSDAPKSLTNFATLSNAPTGDAAAAFTKGDISEAEAPKKKALPEVAVTTGEENEDTLFQ # ORIGINAL: g14181.t1 original gene structure, not modified by PASA NODE_2806_length_5079_cov_35.8901 AUGUSTUS gene 2875 4541 . + . ID=g14181;Name=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS mRNA 2875 4541 . + . ID=g14181.t1;Parent=g14181;Name=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 2875 2964 . + . ID=g14181.t1.exon1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 2875 2964 . + 0 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 3213 3305 . + . ID=g14181.t1.exon2;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 3213 3305 . + 0 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 3438 3569 . + . ID=g14181.t1.exon3;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 3438 3569 . + 0 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 3720 3772 . + . ID=g14181.t1.exon4;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 3720 3772 . + 0 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 3945 4068 . + . ID=g14181.t1.exon5;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 3945 4068 . + 1 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 4267 4321 . + . ID=g14181.t1.exon6;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 4267 4321 . + 0 ID=cds.g14181.t1;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS exon 4519 4541 . + . ID=g14181.t1.exon7;Parent=g14181.t1 NODE_2806_length_5079_cov_35.8901 AUGUSTUS CDS 4519 4541 . + 2 ID=cds.g14181.t1;Parent=g14181.t1 #PROT g14181.t1 g14181 MAEYKKLVVKRFPRIVDRETGDVRYWRKFKSPTIVKEYAAVTSLSFSPVAPYDFAATSSTRVQIYSSTTNAVHKSISRFNNVAYGASFRSDGKLLVAGGEEAIVRVFDVNTKSALRKFEGHSRAVHVTRFSPNKTGVMSASDDRTVRLWDLATEKQTSLLEGHEDYIRTGVSGGASGDLWLTVVVLSTV* # ORIGINAL: g2940.t1 original gene structure, not modified by PASA NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS gene 2 242 . + . ID=g2940;Name=g2940.t1 NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS mRNA 2 242 . + . ID=g2940.t1;Parent=g2940;Name=g2940.t1 NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS exon 2 86 . + . ID=g2940.t1.exon1;Parent=g2940.t1 NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS CDS 2 86 . + 1 ID=cds.g2940.t1;Parent=g2940.t1 NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS exon 204 242 . + . ID=g2940.t1.exon2;Parent=g2940.t1 NODE_8497_length_368_cov_297.133_potentialcontaminant AUGUSTUS CDS 204 242 . + 0 ID=cds.g2940.t1;Parent=g2940.t1 #PROT g2940.t1 g2940 PSRVRHCCLVVRERRYGSGALHDIHWRPGLLGLDRKRRMQL # ORIGINAL: g8201.t1 original gene structure, not modified by PASA NODE_1329_length_12065_cov_47.6339 AUGUSTUS gene 131 12024 . + . ID=g8201;Name=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS mRNA 131 12024 . + . ID=g8201.t1;Parent=g8201;Name=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 131 580 . + . ID=g8201.t1.exon1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 131 580 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 741 871 . + . ID=g8201.t1.exon2;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 741 871 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 1108 1384 . + . ID=g8201.t1.exon3;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 1108 1384 . + 0 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 1863 2276 . + . ID=g8201.t1.exon4;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 1863 2276 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 2462 2668 . + . ID=g8201.t1.exon5;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 2462 2668 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 2838 3485 . + . ID=g8201.t1.exon6;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 2838 3485 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 3707 11041 . + . ID=g8201.t1.exon7;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 3707 11041 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 11281 11871 . + . ID=g8201.t1.exon8;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 11281 11871 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS exon 11993 12024 . + . ID=g8201.t1.exon9;Parent=g8201.t1 NODE_1329_length_12065_cov_47.6339 AUGUSTUS CDS 11993 12024 . + 2 ID=cds.g8201.t1;Parent=g8201.t1 #PROT g8201.t1 g8201 YNLALRRIATQSSTVGFAKASLAVDGVTDQTLSGASMAITAFETNPWWRVDLAAASTVRRITIFGINDVGCCQGCSKDACIAGNVPFKLSIFGVNGEELATKTFTTPDVAYSWGSWLGDAVTGAQYVLVQRLGQGALRIAEVQVVGSRQAPVNNNTADCVLTNGVPKDVSIDATSGDVWRGCTVDWQNGQKLSFTMSLVAGSCNPDGYLREGVQSTTDRYYRRDIGVFSFASVVQMDVTKGTALFWWSPPSDWDKWFVTARVPMGSVCTIRITASFAVTPRQVISVPTYTAAIDDVANVKDAGGLYAPNSVSTYSIQVAAGSVIVLRFNAFCTERNGVLWNDRLCLYDGATTGSSPLGCMAGCEGSAEPLANLASTVSRVADKGSLAAGAFVMSSKNALTLVFETDATTAREGWNATYFTVAEASRECVRNEMTTVDAMWDTIMDGVRWMRTPYTIPNSHKCVGANCAVLVRLSGSGFRIETCYGGDCDAGACLNAPTVQITAPKNRDVVLVAATADQTRVRFNYSVSYFNVPPNLIYATLNTEEAVQTSFVPDATGKSGSFERVITPASTLQQMVVDARDYVDSTTAVAADSVNVTVMQPRVRITYPQNDQAFAKTTDNTVKILVVFAVDGYTYDAATMRPLTNAEFHLSVDGNVVTRVPFTTTAPANIESASLLPKRGSYVLTLALTQVQNGALVVLSEASVTVSVVHVIVNGCTNVYSDNYNPLATVDDGSCDVAVPLCSDPFAANYNTSAESSGISTTAKCPDGTSSPSCCIPHVFNPNYNVNPVPGCTDASAYNYNARANTNDGSCVYVARTLGCIDPSAVNFDPHANTDDGSCVPIILGCTDTQAINYNVSATVNDGSCKDKNVGCMNPLDLRFDATANVHDATKCDGIVGCTKPWAPNYDPSADVEDGSCRRPRGCQYKFEPTDLFADRFTGKITVSSINTYGPLSNWLLEFALKDTFFVEQLSGLQVSYGRTYRNGPKLSHYIVDRVPDNVNVDLAMDGVFLDSGAEDPLSCVPCPAPSRSRALASPGMVSAASFRHEGSSTVRLRVVHDKSGVVVFSNFIIPGHTAEITADSVPGHSLGPSVTLYVDDVLEANVPTGCQSGFGPGYQAGRFVVAAARSFDFKSLCPVTDIYPASMRPTSGRYVFVEPGNDCKDIADGGSIEFNFVGRAMTKALPDATTAVDSFVLNGLRCGRTTPCPLDCNGKGSCVSTTCVCNAGFGGEACEIDCRSPCGGKGSVCSAAAPGRCVCDSGFTGPTCQYSCTGYCNAHGTLCNATSPDKCLCDAGFAGSRCEINCRGACNNKGTVCSTQLPGECVCDSSFAGWACEKNDCSLVGDCSGHGACTGNQTCTCTGVWKGARCDQWGSLRLRPGRVFDGPIVGVDIDYQNIRLICASWEDFTTPPYGNDFGSTVLQVVSYYWAVGFAEDAEAIQKYTLMSRVLTSACITADAKFFNQTARSRVIVVSVKAKDNTGAFSDVSVSNGVQVDLDPPLEALTGAETVRLIHPYFNVPSLTQIPGPLKVQFDACTDLNVPVIDVQLAVGTDVGLDDISPWVSLRPPLIKITGSEQYSASLNTQHASNNEIFVPSTDAHGVLTRDYAEQRASAIASKTEARVILPTTMSTTAVYRVTVRCVAANGMVRDRVSDPVRLVRSRPNMGYIIDGLSKNGRQVIVQADRQFRTDVLYGSWGEPQSPNVGLRSIEWAVGSSPRGTDLQNWEPFAIPPRRAAANEFPDGVVTKGQSLNMYTNYHVSLRATNNAGLTRTITSPGITVLPSGTYCENVTPFVIYDNAIASGFTTRVGPNVTLTASIDATNKAISLLPDANNYVVISARGNNAFPNPYLYDAFEFTVAGVASGGQQLQISAYVDGALAGPFDLSPYLTASRGGILQTPTKVAIPLSDLGLDILSVPVSFYRARSLDIVIEGRDGVPAGMNAVPVLIDDVQFVRASCYGCDNRPYSGLVRDNCGRCSLPGSDCCGHAIPPLRVFDDGFVSGFSPVSVPWMSSASLVTHHGAASAAFTPAKGGLVVLKKADLSLSGAYMRFLNSNKNSSSSSSSTANPTVAQSTPKAFVGCGPCRGGVTFVTLKYIGAKVLTAKPLVIKGESGDTVVDDSRALDTNDLIYVSASFGTTLRNLRDTPATVSTLTFGRYVNITYNSALVQVDTSCGIAFGPGLRVGNFEVIEAYSVDGGKMCPLTCSTCKGGITRLTFKNTGSSTRTIAVRSTGFKILGSVINGITTYQYDIIRTDLKAGESVTIDNGASWTPFVDRVWVCDCTGTDFCKVAADPTPHCPTPDEVLAGKAIGATEDVIDVTCSSPVGPNFVLNRLSTIVVDQGFSRDGGPLCPSPCNKCLGGITRLVLRNAGTGTIPDAQLYVTTNASLPSFFTIFDADTGASRSTRTQFAPNERIAVSAPSGTFIKSVTINYSPSITTTPLQTINLDCTDPNNVFGPIPGTDFPPGNVSPLNMVVIEPETYSALGGRLCPVAAGTCRSGVERIALKYTGPSTKITVTGERGATLISSQNIATNDVVWIAPAIPSATAIGDSVSIKTDASASVVQFPTGCGSPQGRGIARGEFTVVGGVFSQSGPMKDLTCSPCVGGVTWLKLQFKGSELTPVTIYDTDRGDSYSFTVDPTCSGACATPDGQFTVTAKNGTFGNKLVVAPLGFPSTTIDTSCADSAFGAKLNMDLFLVVSGESMRGGPLCPVTCDPTTYCTGISELVVKYKGASNATLLVVPGIGSQTFFDKNNPDALFVGTVVPNQVIRLAANSAQSTVIGSLVSFIVNGTRDSDIVTDCSHKIGPGWRMGAFEVVDAFQGTGVPLCPAAGSGCQSDGTCGPCVGEVTHVAFQYLGGPEDVEVEAFLTASDTDNNALVYQGTVAPNAVFTIRAAPGKTLAHAVALFVDGKLDAMVDMTCAHTFGVGTRKGRFRVTEGFTTGGGELGAAECKPCAGGINYLSLMYGGERAFVPLVITSYSVVSGDMKTIFNATLMGPGAGVELVGGAYLTDVFGESLRVYVDGVPHATIFTDCSVDVGPGASMNDFTVVDAHSLLNGALCAASAICTPKAKAAKARNVPSIGSAGDYTDLQMFMYTEDNYANGTTAALLANQTAMKIYLLDATGRNLGNGVSLSDYIVGPSAANPKWLKAAFPLTALLTESFFLLQNKGTAKCMSSQGGVSSGSILRQYTCSAASEHQRFVWDYGDGNVEYALLRSLGSGLCVSRSGNQAIYDASWRNGKVWLILAPCDSNDDRQRLKWFNGDLIIHKEWGVSITTEGGSTADGAGLMLLSIWENHSKWKYYTEVTYGGTANGAPCNFPFTYKGIKYYTCATVDNDQPWCFTDPDYATRRRWGQCLTDFILSPHQH* # PASA_UPDATE: g11160.t1, single gene model update, valid-1, status:[pasa:asmbl_4265,status:12], valid-1 NODE_2418_length_6349_cov_45.1237 . gene 1787 4610 . - . ID=g11160;Name=g11160.t1 NODE_2418_length_6349_cov_45.1237 . mRNA 1787 4610 . - . ID=g11160.t1;Parent=g11160;Name=g11160.t1 NODE_2418_length_6349_cov_45.1237 . exon 4536 4610 . - . ID=g11160.t1.exon1;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . CDS 4536 4610 . - 0 ID=cds.g11160.t1;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . exon 3151 4371 . - . ID=g11160.t1.exon2;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . CDS 3151 4371 . - 0 ID=cds.g11160.t1;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . exon 1787 2971 . - . ID=g11160.t1.exon3;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . CDS 2027 2971 . - 0 ID=cds.g11160.t1;Parent=g11160.t1 NODE_2418_length_6349_cov_45.1237 . three_prime_UTR 1787 2026 . - . ID=g11160.t1.utr3p1;Parent=g11160.t1 #PROT g11160.t1 g11160 MMGGRTRLALLLLVAAAVGTLALREAGEDLMKAGAQETAEGMRKMKDGAAQMAKDKAYEGAEVASDAAGSVKRGTEYVKDAVVDTASSAYEKVRGTVVDGVETGAKVVRNTAGMVGDAVKGTVNLGADAVKGTAEFVGDAVRGAAQMGADAVKGTVDLGADAVRGTADAARDAGEYVDSTLRHTGRAAAEGVRDAAATGANLAADAVEGAKTGAETIKDTVVDTAGSAFGRVRNAVRGTAEFVEDAVVGTAHLGADAVRGTANLAGAAVRGTADAVKGTAEAIGDAARGAAHLGADAVRGTAELVEDAAVGTAHLGADAVRGTAHLAGAAVRGTVDTVEDAAGAVRDGVSGAIHTARNVAGTVGETVRGSAETVKSGAEHVTDAARDAVAKGAGIVEEGAEFVRRRAERKEETLVEKIKRVTGFADIHAADEPTIFETTKGYAEDLTDRIKTGARDMYHAIVPEPSAKEELKKGMSETADGAKKVGAGAAHLVRDGVYGAADSVKTGIHDAADSVRAGVGKVGGIVSDGVETIRKSVHDTADAGADTARAAKDRAEDAGEGIIDRIKHAAGFGVEDVREDAEDAADAVRRKGREYADSAKKLRDEAWAKGQRAGEAAQDTLDAAKDKADRVVEREKTGAGVVLDGAGRIVDGIKHMVGLGSASAEEVVMGEAAKSSAKASIDDAIDKTRVAGEGARTYIKKGLESPDAMGRRETASPVGATDETESTGFEKMKSLVHDTLRKAGVV* # ORIGINAL: g11159.t1 original gene structure, not modified by PASA NODE_2418_length_6349_cov_45.1237 AUGUSTUS gene 220 1729 . + . ID=g11159;Name=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS mRNA 220 1729 . + . ID=g11159.t1;Parent=g11159;Name=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS exon 220 402 . + . ID=g11159.t1.exon1;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS CDS 220 402 . + 0 ID=cds.g11159.t1;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS exon 712 953 . + . ID=g11159.t1.exon2;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS CDS 712 953 . + 0 ID=cds.g11159.t1;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS exon 1106 1372 . + . ID=g11159.t1.exon3;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS CDS 1106 1372 . + 1 ID=cds.g11159.t1;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS exon 1642 1729 . + . ID=g11159.t1.exon4;Parent=g11159.t1 NODE_2418_length_6349_cov_45.1237 AUGUSTUS CDS 1642 1729 . + 1 ID=cds.g11159.t1;Parent=g11159.t1 #PROT g11159.t1 g11159 MLLVSLTLPLVATLPVRSQGLVGAIALCRDDRGGDGDGLCPDAVVDFLLELMRNNDNSGNEFDDGPYVAALVSALMTASSGFEETSQYYQQIIEEFVRRINIDRLSPSFRNCVTIAALRALAELRERGASFIPPDLFVDFAEHGHFFDVRIAAMDILGRIAAVENKDESTERTGPPDEPVGELCLARLVTIARDDPALTIRRAAIRTIARYAKVLPPVSRALVQSVVALIGGQQSADFGLRVEAAILDGALPRNFFIFV* # ORIGINAL: g416.t1 original gene structure, not modified by PASA NODE_988_length_15045_cov_53.0457 AUGUSTUS gene 46 274 . + . ID=g416;Name=g416.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS mRNA 46 274 . + . ID=g416.t1;Parent=g416;Name=g416.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 46 274 . + . ID=g416.t1.exon1;Parent=g416.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 46 274 . + 1 ID=cds.g416.t1;Parent=g416.t1 #PROT g416.t1 g416 FRGARDSQDPVCSYRPRAGHVPPQPLWGRHDRLRVHLSLCALLHGNSPKRAEDPWFCAITQGRRHGWSVCAPKDKV # ORIGINAL: g419.t1 original gene structure, not modified by PASA NODE_988_length_15045_cov_53.0457 AUGUSTUS gene 5683 7670 . - . ID=g419;Name=g419.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS mRNA 5683 7670 . - . ID=g419.t1;Parent=g419;Name=g419.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 7309 7670 . - . ID=g419.t1.exon1;Parent=g419.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 7309 7670 . - 0 ID=cds.g419.t1;Parent=g419.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 5683 7162 . - . ID=g419.t1.exon2;Parent=g419.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 5683 7162 . - 1 ID=cds.g419.t1;Parent=g419.t1 #PROT g419.t1 g419 MSDESRGSPSGVAPMSPGNFDIARARAMLANFQQQATARQEGTSSVESTPRLKSADTLSIGWSPGQSLGASPAHERMGAVSPTPRAYSPSPQMRMAVSPTPEVVLPLDLNTLMEGWTDDDWLHSIPHRPLSLVERSVTVDEWLHQDDASDPPEALMSMLSPSTRNYSQSSAYAHGDRYETSRADAAPSVPPTHSSAGMSATFTKYSRTPASVSASASNSQHGHDAPAATAVSHVRAPGAPRPSGLLTPTQLSRAGSMNDLAKMSPAVENLLANAERSGQEKRREALERARSTSQLPMDLISKYINTGHASSSSKDGANADRSVANDVEDSDASATQHYKNARAERLKNVGSLKAFLDGSSGPAGRPAPSPQRSSSAQYAPAPAQGAHSTATMHRRSPSAGSVASNSGSDAGSAGGASSASRMRPPTPTGMSSTTAPVGATRGISNGHASGVAGVGASGRAHEAFVAATKAARQARDVAISASNGNIAASSSTTPKKTAASPRRSSVGLSGSASVAVHQAQQQPQQPPPQPTATGGSRLPVPRSSIPRSSSFGNSTGGSSHGSTSNSRGHSRTPSVTSDGGGGGNDRLNSSGGFSNKYLSADAAPAEPWDDGFY* # PASA_UPDATE: g420.t1, single gene model update, valid-1, status:[pasa:asmbl_10235,status:3], valid-1 NODE_988_length_15045_cov_53.0457 . gene 8196 11022 . - . ID=g420;Name=g420.t1 NODE_988_length_15045_cov_53.0457 . mRNA 8196 11022 . - . ID=g420.t1;Parent=g420;Name=g420.t1 NODE_988_length_15045_cov_53.0457 . five_prime_UTR 10761 11022 . - . ID=g420.t1.utr5p1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 10626 11022 . - . ID=g420.t1.exon1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 10626 10760 . - 0 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 10382 10506 . - . ID=g420.t1.exon2;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 10382 10506 . - 0 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 9980 10136 . - . ID=g420.t1.exon3;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 9980 10136 . - 1 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 9664 9751 . - . ID=g420.t1.exon4;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 9664 9751 . - 0 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 9273 9413 . - . ID=g420.t1.exon5;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 9273 9413 . - 2 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 8898 8989 . - . ID=g420.t1.exon6;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 8898 8989 . - 2 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . exon 8196 8718 . - . ID=g420.t1.exon7;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . CDS 8599 8718 . - 0 ID=cds.g420.t1;Parent=g420.t1 NODE_988_length_15045_cov_53.0457 . three_prime_UTR 8196 8598 . - . ID=g420.t1.utr3p1;Parent=g420.t1 #PROT g420.t1 g420 MSSDGLWKLSDDREIAKQIWEGKIPIVFNLAPNEVTSDETPEPYYILAPRSSYLPLVTERVRKHFQPLIPDCEDEMWFDYAGQPLKWHYPIGVLFDSLGSPSQLPWSLTVHFQGFPDDELLHCHDKDTVEAYFIALIKEADYLKNGSTKKIMGLQKKDQKQLWMGLKNAKFDQFWAINKRLMQRDENTHFRNIPFRLYMPDQTVIQEPFSPVAPDGTERTLGDLMKAILPDVFGENSVQLNNEQQQVIIHGISPSFETPLEWLSEHCSHPDNFIHMCIRSMESPV* # PASA_UPDATE: g417.t1, single gene model update, valid-1, status:[pasa:asmbl_10234,status:3], valid-1 NODE_988_length_15045_cov_53.0457 . gene 477 1973 . - . ID=g417;Name=g417.t1 NODE_988_length_15045_cov_53.0457 . mRNA 477 1973 . - . ID=g417.t1;Parent=g417;Name=g417.t1 NODE_988_length_15045_cov_53.0457 . five_prime_UTR 1881 1973 . - . ID=g417.t1.utr5p1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . exon 1751 1973 . - . ID=g417.t1.exon1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . CDS 1751 1880 . - 0 ID=cds.g417.t1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . exon 1491 1568 . - . ID=g417.t1.exon2;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . CDS 1491 1568 . - 2 ID=cds.g417.t1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . exon 1197 1279 . - . ID=g417.t1.exon3;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . CDS 1197 1279 . - 2 ID=cds.g417.t1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . exon 477 950 . - . ID=g417.t1.exon4;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . CDS 816 950 . - 0 ID=cds.g417.t1;Parent=g417.t1 NODE_988_length_15045_cov_53.0457 . three_prime_UTR 477 815 . - . ID=g417.t1.utr3p1;Parent=g417.t1 #PROT g417.t1 g417 MADNDWDSVTVLRKKPVSASAAKSEQAINQARRAGASIETEKKFSAAMNRQHGTDKDTAKLDRETEELHHDRVPLDLSRTIMKARNDLKLTQKDLATKINEKPGVINEYESGKAIPNQQILGKLERALKVKLRGANMGQPL* # ORIGINAL: g421.t1 original gene structure, not modified by PASA NODE_988_length_15045_cov_53.0457 AUGUSTUS gene 11724 14909 . + . ID=g421;Name=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS mRNA 11724 14909 . + . ID=g421.t1;Parent=g421;Name=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 11724 11808 . + . ID=g421.t1.exon1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 11724 11808 . + 0 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 11986 12169 . + . ID=g421.t1.exon2;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 11986 12169 . + 2 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 12386 12473 . + . ID=g421.t1.exon3;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 12386 12473 . + 1 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 12729 12898 . + . ID=g421.t1.exon4;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 12729 12898 . + 0 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 13044 13345 . + . ID=g421.t1.exon5;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 13044 13345 . + 1 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 13489 13740 . + . ID=g421.t1.exon6;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 13489 13740 . + 2 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 13870 13935 . + . ID=g421.t1.exon7;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 13870 13935 . + 2 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 14174 14352 . + . ID=g421.t1.exon8;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 14174 14352 . + 2 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 14528 14691 . + . ID=g421.t1.exon9;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 14528 14691 . + 0 ID=cds.g421.t1;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS exon 14861 14909 . + . ID=g421.t1.exon10;Parent=g421.t1 NODE_988_length_15045_cov_53.0457 AUGUSTUS CDS 14861 14909 . + 1 ID=cds.g421.t1;Parent=g421.t1 #PROT g421.t1 g421 MTRKKPFSHKQKKQQLLDKRASKREEADGNGDKTVIFKGESAHHHNQSNHPNTDSHDSDGAGSHNNGPAVPVARLNEQPAGKPARHDPNRYRLHFEKESRDVIESRKAQSRLPLRALGQDALVAGLSDNPSAEDFIPMPRRPAWSFSMPKEEIDRNEDRYFRNYVEEMYAKYPKDKLSYFELNLETWRQLWRVLEISDVILLIADVRHPVLHFPPSLFEYVTKDLKKPLVFVLNKADLVPGDLAEAWRSHFVEKYPGLHVAIFTSYPEHRTLDIRDVFKRRKPTGKRNRAVLGAEQILAACEHLNIEKNGALVQWRDKLAIQGNNGDAKADDGQSATDATTEAEDDSDGDDESVDEDAGLQTGIIEDTERGVHTDYVTIGLVGHPNVGKSSILNGLVGKTVVSCSRTPGHTKHFQTIFLTPKIRLCDSPGLVFPSLVPKQLQILSGMYPIAQVSEPFTVVQYLCERVPVVQILRLSLRDLESDDDGVWTAWKVCEGTVGKTKGVSHCQSSKA* # PASA_UPDATE: g418.t1, single gene model update, valid-1, status:[pasa:asmbl_10236,status:12], valid-1 NODE_988_length_15045_cov_53.0457 . gene 2677 5248 . + . ID=g418;Name=g418.t1 NODE_988_length_15045_cov_53.0457 . mRNA 2677 5248 . + . ID=g418.t1;Parent=g418;Name=g418.t1 NODE_988_length_15045_cov_53.0457 . exon 2677 4187 . + . ID=g418.t1.exon1;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . CDS 2677 4187 . + 0 ID=cds.g418.t1;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . exon 4430 4574 . + . ID=g418.t1.exon2;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . CDS 4430 4574 . + 1 ID=cds.g418.t1;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . exon 4766 5248 . + . ID=g418.t1.exon3;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . CDS 4766 4933 . + 0 ID=cds.g418.t1;Parent=g418.t1 NODE_988_length_15045_cov_53.0457 . three_prime_UTR 4934 5248 . + . ID=g418.t1.utr3p1;Parent=g418.t1 #PROT g418.t1 g418 MSGRKKSGSAVKEKKGGLGKPQKSLPDIPLPTNVTELTKEFYTIQIKDLETRIFELRTRCQELETQNSELGETCEKQAADQRDIVEYLNAQLARKDSEIAALEEQIVQLESQKDAERDRYELELTTLATKSKEQTDQLTLQTDLFRQKLDELREFRHHKEEYEARTAALEIQLQEREREHTRIVNDLERKAVQDKDRLKKEMLQKVNEVISNFRDITDKQMAETTKRTIQENITINAQLTKMSAKTMELISQNEDLVASEKKLRLRVEILDQAEIEMAKKNRSQQKAIRLLLDRLRSAGSNADGIKLPEEPAVDANLGSKNLGGGAPLPPINGDGTQQHGERKHDDSEGGSVRQLERDLEEARAEAGRFADQATAARKEQERLMALLSDTASFMLVTLEEAKKQIGRDRMSASREEGGGGGSGRHSSSGRASVGKGRTGSADSRSSRQSSAAGGHAWSEKDPVPKTLSGLSAVEREKVLGFLLSRLNTFQTMRQPFTVGVAEGGGEEVHVDFHVGLVPRQGPSGSRSQATGKKVRSNESIRNVGVQTDSIPKAMFFAEQLVSRGAVPKETVPWDPQMVSQVSQGVDILTKSPSAHGSPVKSLRKSVG* # ORIGINAL: g4717.t1 original gene structure, not modified by PASA NODE_2509_length_6044_cov_41.6339 AUGUSTUS gene 214 2542 . - . ID=g4717;Name=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS mRNA 214 2542 . - . ID=g4717.t1;Parent=g4717;Name=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS exon 1942 2542 . - . ID=g4717.t1.exon1;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS CDS 1942 2542 . - 0 ID=cds.g4717.t1;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS exon 1600 1645 . - . ID=g4717.t1.exon2;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS CDS 1600 1645 . - 2 ID=cds.g4717.t1;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS exon 1318 1467 . - . ID=g4717.t1.exon3;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS CDS 1318 1467 . - 1 ID=cds.g4717.t1;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS exon 214 1183 . - . ID=g4717.t1.exon4;Parent=g4717.t1 NODE_2509_length_6044_cov_41.6339 AUGUSTUS CDS 214 1183 . - 1 ID=cds.g4717.t1;Parent=g4717.t1 #PROT g4717.t1 g4717 MRVLRLRLTPVAVAVSVFFLVSLGLTLDALLSALVTPNPVRHFSQPLDRGFAEDRLPVGDEAAVGVGVGVSVASLSLPGVGGNSNALGPGTDGPPRAALVNVEQTQTENSERLSSSGSGHDEAVDNALLALRGHMERSREALEGSSDASTLGGGDDGATSADGFDPDNESLSAPSDALDGWYAQLRQLRAAWKSYGRKSQAVQDVDNEKSDKCKNRASPSTPFVVHSDGPLPCKPYEFVGPVRSKYTTEAGLECFGPGFDAVKDGSCVCKTGWTGATCDIPFAVAASPGHEGVSRSPPVRIVDCFNFNMEADLLRIRLKELRGVVDAHVIVEARVSLAGTPKALRFAELAPDVIAEYGDRIIYVVIDSAPEGIARLDGGFAILNVGYSAVGQLGLPAIAGLSDRDLVLFGDVDEIPDSRVIGYLREHTTGLPLHTSIYYRWSYYGFMWRNSRGVHLSSVVTMHHLKNALSWDSIKIRGRPAEYDRSYWVIGNGNVFAGWHCSWCFPVSAFVVKLDSAIHGDYPRWGDYAEKKEIGYLQENKRLGRWFDGTVGGTLTTPATDAYMAPQWALDNQPLFRYLFDRNVPDAL* # PASA_UPDATE: g4718.t1, single gene model update, valid-1, status:[pasa:asmbl_4464,status:12], valid-1 NODE_2509_length_6044_cov_41.6339 . gene 3082 5915 . - . ID=g4718;Name=g4718.t1 NODE_2509_length_6044_cov_41.6339 . mRNA 3082 5915 . - . ID=g4718.t1;Parent=g4718;Name=g4718.t1 NODE_2509_length_6044_cov_41.6339 . five_prime_UTR 5914 5915 . - . ID=g4718.t1.utr5p1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 5850 5915 . - . ID=g4718.t1.exon1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 5850 5913 . - 0 ID=cds.g4718.t1;Parent=g4718.t1;5_prime_partial=true NODE_2509_length_6044_cov_41.6339 . exon 4907 5599 . - . ID=g4718.t1.exon2;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 4907 5599 . - 2 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 4454 4628 . - . ID=g4718.t1.exon3;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 4454 4628 . - 2 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 4195 4337 . - . ID=g4718.t1.exon4;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 4195 4337 . - 1 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 3958 4089 . - . ID=g4718.t1.exon5;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 3958 4089 . - 2 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 3653 3737 . - . ID=g4718.t1.exon6;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 3653 3737 . - 2 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . exon 3082 3393 . - . ID=g4718.t1.exon7;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . CDS 3162 3393 . - 1 ID=cds.g4718.t1;Parent=g4718.t1 NODE_2509_length_6044_cov_41.6339 . three_prime_UTR 3082 3161 . - . ID=g4718.t1.utr3p1;Parent=g4718.t1 #PROT g4718.t1 g4718 RVLVSSSSVAANATAEPSTDPVASASTILSASFSKTSAALSSHSHPVTLAVASSVASSAATHGSVASSPRSAMMHTGVSSRLSLDVSSASPPSSRMPQLTTSSQLSPGHVDTFAPHVTPLATGLSSSVAAASLFSHSSDDSGHGTGVSTTNPAPSVDPLSGGLSVHVVGELLVTWPTPAVPMRAVAVGGRAPFTFVWEVSSSGAGPGLAVLALSNGNAAVISPPVGMHSMRVVVTDASGSTASAAASVLVDGERNTAVLFDVWTEWSATLPAPDSAVGLASLAQALAASVGVPASDVFVDSVAAMRACFQCNVFTACVVNGSKTVPPQDVVATYAAGRAVAPVANSSVDIVHLYAHSQGTPIADHCRACIAHVTCVPGRSCVCDGLWMENPVKQYGAGVKNCDWYMPLIGGVIGGAALFIVAVLWAYRALRRCCGRRHHRYSLINYADIELMERTPSLSADGYSSSGDESELETPPSGTRATPVHPSSSRNGTNFGFDRIPVVPHKT* # ORIGINAL: g11065.t1 original gene structure, not modified by PASA NODE_3713_length_2908_cov_47.917 AUGUSTUS gene 270 2326 . - . ID=g11065;Name=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS mRNA 270 2326 . - . ID=g11065.t1;Parent=g11065;Name=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS exon 1245 2326 . - . ID=g11065.t1.exon1;Parent=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS CDS 1245 2326 . - 0 ID=cds.g11065.t1;Parent=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS exon 714 834 . - . ID=g11065.t1.exon2;Parent=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS CDS 714 834 . - 1 ID=cds.g11065.t1;Parent=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS exon 270 457 . - . ID=g11065.t1.exon3;Parent=g11065.t1 NODE_3713_length_2908_cov_47.917 AUGUSTUS CDS 270 457 . - 0 ID=cds.g11065.t1;Parent=g11065.t1 #PROT g11065.t1 g11065 MAPISTNNDDLDAAPSRAVSHRRPFVREHVALFVDGALILLLWFTAGGLNGSAAEGAYLRASVVAFTFRSSLFDAVALSLGRNAIIAAILVGVARHVTSGGRAGDPAADRHVRAATVTALVLSVGTLCFLATKTTLVALDNGRSLSGSAPVGLTLLGLATFASFGHVVLAVTLPTAARGLVYRNELDDDNNRELAGETADRRAKGSVNIMRLVRMARPELWINIAALVALAASSAAVLVVPSFFGKIIDAVSEEGDREELNRSVIILVLIFAGGSVATFFRGWLFTLSGQRLVARMRRLLFAKIMEQEIAFFDSNRTGELINRLASDATVVQDAITVNFSMLARYAVQVVGCLILMFILSWKLTAVMLSVVPVVAFGAVAYGKYVRRLRAKFQDELAVSSSVAEESFGNARTVRSFSSEDKATAAYGNGVERSLHVGQRLALASGTFQGAIGMLAQSAIALVL # PASA_UPDATE: g11383.t1, single gene model update, valid-1, status:[pasa:asmbl_8104,status:12], valid-1 NODE_5484_length_834_cov_75.834 . gene 17 834 . + . ID=g11383;Name=g11383.t1 NODE_5484_length_834_cov_75.834 . mRNA 17 834 . + . ID=g11383.t1;Parent=g11383;Name=g11383.t1 NODE_5484_length_834_cov_75.834 . five_prime_UTR 17 26 . + . ID=g11383.t1.utr5p1;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . exon 17 128 . + . ID=g11383.t1.exon1;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . CDS 27 128 . + 0 ID=cds.g11383.t1;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . exon 415 560 . + . ID=g11383.t1.exon2;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . CDS 415 560 . + 0 ID=cds.g11383.t1;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . exon 726 834 . + . ID=g11383.t1.exon3;Parent=g11383.t1 NODE_5484_length_834_cov_75.834 . CDS 726 834 . + 1 ID=cds.g11383.t1;Parent=g11383.t1;3_prime_partial=true #PROT g11383.t1 g11383 MEVEFPSHSAAVKPQLRARLLNYKKEIAQLDKELRKASNQMNGEQAREELLNMDEYSTSADSKQRLLSNTERLDRTSDRLREGYKMAVETEDIGIEVLGELDRQRGVLQRTKDKVRAHV # PASA_UPDATE: g5725.t1, single gene model update, valid-1, status:[pasa:asmbl_6597,status:12], valid-1 NODE_3811_length_2700_cov_92.1554 . gene 119 2700 . - . ID=g5725;Name=g5725.t1 NODE_3811_length_2700_cov_92.1554 . mRNA 119 2700 . - . ID=g5725.t1;Parent=g5725;Name=g5725.t1 NODE_3811_length_2700_cov_92.1554 . five_prime_UTR 2666 2700 . - . ID=g5725.t1.utr5p1;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . five_prime_UTR 2341 2424 . - . ID=g5725.t1.utr5p2;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . five_prime_UTR 2013 2148 . - . ID=g5725.t1.utr5p3;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . five_prime_UTR 1402 1444 . - . ID=g5725.t1.utr5p4;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 2666 2700 . - . ID=g5725.t1.exon1;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 2341 2424 . - . ID=g5725.t1.exon2;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 2013 2148 . - . ID=g5725.t1.exon3;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 1332 1444 . - . ID=g5725.t1.exon4;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . CDS 1332 1401 . - 0 ID=cds.g5725.t1;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 807 920 . - . ID=g5725.t1.exon5;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . CDS 807 920 . - 2 ID=cds.g5725.t1;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . exon 119 701 . - . ID=g5725.t1.exon6;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . CDS 304 701 . - 2 ID=cds.g5725.t1;Parent=g5725.t1 NODE_3811_length_2700_cov_92.1554 . three_prime_UTR 119 303 . - . ID=g5725.t1.utr3p1;Parent=g5725.t1 #PROT g5725.t1 g5725 MLEPCVDCLTGKAWVNVPYANVMEYGRPDCASRGIEPYFTPQQHGRMRCYADLVYKPWTKQVTPAPVVFAPKATAGEGRAIVLTWFRSLRSGRGDTLQYEIQRSPAFSTPANPIVDTTTFTDVAVIPGVLYSYKVVAVSSSERSRASPPSNPVLLALSDADDTQVWRTVIAEYREELARWEDETAGCNAHATQ* # PASA_UPDATE: g10039.t1, single gene model update, valid-1, status:[pasa:asmbl_6475,status:12], valid-1 NODE_3740_length_2860_cov_42.4007 . gene 885 2828 . - . ID=g10039;Name=g10039.t1 NODE_3740_length_2860_cov_42.4007 . mRNA 885 2828 . - . ID=g10039.t1;Parent=g10039;Name=g10039.t1 NODE_3740_length_2860_cov_42.4007 . exon 2673 2828 . - . ID=g10039.t1.exon1;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . CDS 2673 2828 . - 0 ID=cds.g10039.t1;Parent=g10039.t1;5_prime_partial=true NODE_3740_length_2860_cov_42.4007 . exon 2188 2401 . - . ID=g10039.t1.exon2;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . CDS 2188 2401 . - 0 ID=cds.g10039.t1;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . exon 1881 1945 . - . ID=g10039.t1.exon3;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . CDS 1881 1945 . - 2 ID=cds.g10039.t1;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . exon 1575 1715 . - . ID=g10039.t1.exon4;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . CDS 1575 1715 . - 0 ID=cds.g10039.t1;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . exon 885 1347 . - . ID=g10039.t1.exon5;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . CDS 1195 1347 . - 0 ID=cds.g10039.t1;Parent=g10039.t1 NODE_3740_length_2860_cov_42.4007 . three_prime_UTR 885 1194 . - . ID=g10039.t1.utr3p1;Parent=g10039.t1 #PROT g10039.t1 g10039 FANNKDSLFASAWNGAQISTPLESEIEQFNRALGVGADGLDLVVSVNGKDHPVRFLDIRPSFQDALGGESDGNYVCHVEVDGKVIEISPIAAYYPVLDFIVNSQPADDEEHVHGDECDHGYGDVVTMQVLGENSAGIKYRHVGSEYVVTVRTTRENEIVKVLPKKVKPDTSNMVVSPMPGQIVSVAVKPGDLVVAGQEVAVIEAMKMQNSLRASKTGKVKSVFVKEGQSLQSEALVVEMEKD* # ORIGINAL: g222.t1 original gene structure, not modified by PASA NODE_2896_length_4816_cov_75.9962 AUGUSTUS gene 246 4572 . - . ID=g222;Name=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS mRNA 246 4572 . - . ID=g222.t1;Parent=g222;Name=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 4504 4572 . - . ID=g222.t1.exon1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 4504 4572 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 4070 4237 . - . ID=g222.t1.exon2;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 4070 4237 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 3768 3854 . - . ID=g222.t1.exon3;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 3768 3854 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 3263 3425 . - . ID=g222.t1.exon4;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 3263 3425 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 2433 2500 . - . ID=g222.t1.exon5;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 2433 2500 . - 2 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 1810 2053 . - . ID=g222.t1.exon6;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 1810 2053 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 1454 1590 . - . ID=g222.t1.exon7;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 1454 1590 . - 2 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 1026 1181 . - . ID=g222.t1.exon8;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 1026 1181 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 669 773 . - . ID=g222.t1.exon9;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 669 773 . - 0 ID=cds.g222.t1;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 246 347 . - . ID=g222.t1.exon10;Parent=g222.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 246 347 . - 0 ID=cds.g222.t1;Parent=g222.t1 #PROT g222.t1 g222 MRLQTIIQEVSVSLEEASLQAVQNMPRVVREADNVSQEAATLRERMFLVQADLEKIERETGSSMVWDMYLHVCAFVAVRAILMELDGIKSRMETVTLSLNDADDWSGLLRTADDLFSSDDVNLAAVGEHLALIKDCEDRLSHVTDADDRRRQYQALENRHVI*WLRGFYDEVLAVLRREAVFVGQVFTDTSSTRLLLATTAQCLAHLQPTLDSLIDRDILADHVTRRVPELIALREAALSFAKAIPSALMVASQARVDADGADTSTATLPLESFRTAEEAIELTHAIFSPFVRFMRDYGRLERQTLGAGLDQAAVFSLSGFLDTIGAVSDSVPRVFALVEAAVDRCIRLTEGSEGRALILAYEQTINEYTNRVSALVGQLRKLCRLDSIDVQQTQAAASNAFDALAAEFSDDWALFQGSLRLVRASGDIIMR* # ORIGINAL: g221.t1 original gene structure, not modified by PASA NODE_2896_length_4816_cov_75.9962 AUGUSTUS gene 2 111 . + . ID=g221;Name=g221.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS mRNA 2 111 . + . ID=g221.t1;Parent=g221;Name=g221.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS exon 2 111 . + . ID=g221.t1.exon1;Parent=g221.t1 NODE_2896_length_4816_cov_75.9962 AUGUSTUS CDS 2 111 . + 2 ID=cds.g221.t1;Parent=g221.t1 #PROT g221.t1 g221 NNNNNNNNNNNNNNNNNNNNNNNNNSNSNSNSNSNS # ORIGINAL: g10303.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 19792 20950 . + . ID=g10303;Name=g10303.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 19792 20950 . + . ID=g10303.t1;Parent=g10303;Name=g10303.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 19792 20119 . + . ID=g10303.t1.exon1;Parent=g10303.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 19792 20119 . + 0 ID=cds.g10303.t1;Parent=g10303.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 20280 20950 . + . ID=g10303.t1.exon2;Parent=g10303.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 20280 20950 . + 2 ID=cds.g10303.t1;Parent=g10303.t1 #PROT g10303.t1 g10303 MDPFTTPTTDDMSGLMPLHSLAACDPYLFDVSASWSMNFAEVAAYDEPTPAPYNEPLNVDAEADGAAGDLSVDQWATDGAPDSHLHSLLVTPPSTPSLTHNANTGAQPQSAQPQSTLPNAHWTLDTQGSPPHSPSPSSPPSSSSSLLSPSGTNDYAHVQAPAPCSSLTIAPLAYPDVATSPFSCVPANHVPPALTPPPPVSLQRKPTSVRKLGTRHQVKQLLQPILSDISEGKYSDFDGNGMLTSVARKRLVRAIRKRLFSALKTYAHLSMEDGTREKDQDEDACRQRVKYALQAFNYGNRYSTGAIPVGGHVIGITFVAYKIALAVAGYTL* # ORIGINAL: g10304.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 21978 22883 . + . ID=g10304;Name=g10304.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 21978 22883 . + . ID=g10304.t1;Parent=g10304;Name=g10304.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 21978 22883 . + . ID=g10304.t1.exon1;Parent=g10304.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 21978 22883 . + 0 ID=cds.g10304.t1;Parent=g10304.t1 #PROT g10304.t1 g10304 MSPFSSFDYDPMDAGASLFDSAANTDEPTPDAEAWVNGVLWSDSNLYGAADSHLDSVLVTPPSTPSLTHKSNKDAQPQCTLPKAPTALDTQYSPLRSPSSPSWSSGTNGYGQFQSDAPGEIIIPPVAYAEEFDEIMQMVCHDATSSKEDAAASRVPQAATALTPTPVTLQWMPTAGRKDLAVREVLKRIESIISTIPHEHKYKECVDRNGMLDSRGRTRLVKAIRQKILPPKPRQEKKAKTGEDDACRHRVKSALKHLIEGKDYRKGKLFVGHDNHQLPRLAQRIALAIAGYSQKLPGGDD* # ORIGINAL: g10307.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 28855 29285 . - . ID=g10307;Name=g10307.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 28855 29285 . - . ID=g10307.t1;Parent=g10307;Name=g10307.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 29084 29285 . - . ID=g10307.t1.exon1;Parent=g10307.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 29084 29285 . - 0 ID=cds.g10307.t1;Parent=g10307.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 28855 28946 . - . ID=g10307.t1.exon2;Parent=g10307.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 28855 28946 . - 2 ID=cds.g10307.t1;Parent=g10307.t1 #PROT g10307.t1 g10307 MWCTEQKYSNSYDLFIRGEEILSGAQRIHDPVLLEQRAREHGVELAKIQPYIDAFKYGTPPHGGGGIGLERVVMLYLGLGNIRRTSMFPRDPKRVTP* # PASA_UPDATE: g10298.t1, single gene model update, valid-1, status:[pasa:asmbl_4359,status:12], valid-1 NODE_245_length_29429_cov_44.2227 . gene 187 1909 . - . ID=g10298;Name=g10298.t1 NODE_245_length_29429_cov_44.2227 . mRNA 187 1909 . - . ID=g10298.t1;Parent=g10298;Name=g10298.t1 NODE_245_length_29429_cov_44.2227 . exon 1808 1909 . - . ID=g10298.t1.exon1;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . CDS 1808 1909 . - 0 ID=cds.g10298.t1;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . exon 1426 1611 . - . ID=g10298.t1.exon2;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . CDS 1426 1611 . - 0 ID=cds.g10298.t1;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . exon 988 1203 . - . ID=g10298.t1.exon3;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . CDS 988 1203 . - 0 ID=cds.g10298.t1;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . exon 562 627 . - . ID=g10298.t1.exon4;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . CDS 562 627 . - 0 ID=cds.g10298.t1;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . exon 187 273 . - . ID=g10298.t1.exon5;Parent=g10298.t1 NODE_245_length_29429_cov_44.2227 . CDS 187 273 . - 0 ID=cds.g10298.t1;Parent=g10298.t1;3_prime_partial=true #PROT g10298.t1 g10298 MSAPLSAKQKSEAVHMLTVDILQKLKNAGPMWEQFIKASMRYHDQLKGSIQAANQFLDAFSNIAQMAANAKGGTGDLGVGLHQIAEVHRKIEQKKEAVCDTLMNEIIVPLQEKQTIDKRNLQRIEDDYSRNIRTCKDRIKSAEKKSEKAAKDAMKSKDMYASQALLQECLLSVTDSVKELEKLRQDTLKTVLIEERKRYCFMLMHYGTVIKNEIVVYAE # ORIGINAL: g10302.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 17902 18888 . + . ID=g10302;Name=g10302.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 17902 18888 . + . ID=g10302.t1;Parent=g10302;Name=g10302.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 17902 18888 . + . ID=g10302.t1.exon1;Parent=g10302.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 17902 18888 . + 0 ID=cds.g10302.t1;Parent=g10302.t1 #PROT g10302.t1 g10302 MDPFTTLTTDDLSCLSLAGRDVDPYLFDAIAPSPSRLDFAEIAAYDAPTPAPYNEPLNGNAEAEGVAGDLSVDQWATDGAADSHLHSLLVTPPSTPSLTHNANTGAQPQSTLPKAPTALDTQYSPLRSPSPSSPPSSSSSPSSLSSSATNDNAHVQAPAPCSSITIAPLAYPDEFDDITQTVCHNDTSPFSGVPTKHVPQVPAAGTPPPATLQWMPTAGRKDCTPYQVQQLLQPILSDIGDGKYSDFNENGMLNSVIRKRLLKKIRATLLPRATPNEKEACRHRVKCALQAFSHGNRYSTGALPVGGHAIGITFVAYKIALAVAGYKL* # PASA_UPDATE: g10299.t1, single gene model update, valid-1, status:[pasa:asmbl_4361,status:3], valid-1 NODE_245_length_29429_cov_44.2227 . gene 2734 5207 . + . ID=g10299;Name=g10299.t1 NODE_245_length_29429_cov_44.2227 . mRNA 2734 5207 . + . ID=g10299.t1;Parent=g10299;Name=g10299.t1 NODE_245_length_29429_cov_44.2227 . five_prime_UTR 2734 2803 . + . ID=g10299.t1.utr5p1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 2734 2953 . + . ID=g10299.t1.exon1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 2804 2953 . + 0 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 3164 3490 . + . ID=g10299.t1.exon2;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 3164 3490 . + 0 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 3629 3728 . + . ID=g10299.t1.exon3;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 3629 3728 . + 0 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 3935 4000 . + . ID=g10299.t1.exon4;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 3935 4000 . + 2 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 4220 4390 . + . ID=g10299.t1.exon5;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 4220 4390 . + 2 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 4583 4723 . + . ID=g10299.t1.exon6;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 4583 4723 . + 2 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . exon 4864 5207 . + . ID=g10299.t1.exon7;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . CDS 4864 4976 . + 2 ID=cds.g10299.t1;Parent=g10299.t1 NODE_245_length_29429_cov_44.2227 . three_prime_UTR 4977 5207 . + . ID=g10299.t1.utr3p1;Parent=g10299.t1 #PROT g10299.t1 g10299 MRSITKLIVGLALLGAALGMAIGIASSLAGSDFENQTATQKLAAIWTQIQADNGASAEFPGAFALIGIFIEDLWVTGRRSSDIMPEGRQKLIHSVGAVAQAKFNWNSAASKYTGLFRQADNVILRASSATKPGQSDGGLFSKPSKTYAPGLSFKIFRDNVPSANFFAMWQLDGQQDFNFFLNPLANHVPARPDLPLQVKLLGKKFGTVSQFPGLVGLSDFAAFRQDGTAEAKANFPFALVFQPNSDITERFRDTTEFDIPAQFSRSFAGNEPLYRVFAVPTVDSTALEYVGDLVLKSKFTGSKFADQQLFFRHVFIEEDFKLRPDWLAAFNEEKSQTEGAQKYQPYLPQRQAMKL* # ORIGINAL: g10305.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 24507 25127 . + . ID=g10305;Name=g10305.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 24507 25127 . + . ID=g10305.t1;Parent=g10305;Name=g10305.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 24507 25127 . + . ID=g10305.t1.exon1;Parent=g10305.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 24507 25127 . + 0 ID=cds.g10305.t1;Parent=g10305.t1 #PROT g10305.t1 g10305 MAMADLYYHTAFVAADSEAVCAADQADVLQGADLFGLTDEEWHMLSIEGIGAGLIDGQFLGVEADGDPFHNQLDVNNPAEFRQLYAPAPIDHCAPTGGRKDLTLEQVCQLIQPIYSTIRAGVYNKFIDNGMFVCVGRKRLVQEVRAALLPGATPKENEACRHRVKCALEPFIYGDKYSTGALPLSDDFTIVHVLHKIALAVAGYRQ* # ORIGINAL: g10306.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 26166 28295 . + . ID=g10306;Name=g10306.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 26166 28295 . + . ID=g10306.t1;Parent=g10306;Name=g10306.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 26166 28295 . + . ID=g10306.t1.exon1;Parent=g10306.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 26166 28295 . + 0 ID=cds.g10306.t1;Parent=g10306.t1 #PROT g10306.t1 g10306 MLSRVFRRLSRQDDDAWIDDLSNMPAESAWQVVTGRAFAEGNEEVVSLVRMTGAVQQTARGLIVKSSPEVARDFLCALACVHGSEALLNALIRNPSVDPAALDNLAVRLAAEKGLTSCLRPLLDDNRVDPSAQDNAALRAACANGSLPAVSLLLKHRSVDARSRSVTAALGIACERGYSGIVRLLLSSGADPASGDGAHFCRACAKGHTKVAKCFLKDERFDMSSFWNLALNAASRGGHVEVVKLLMNTHAGDASADGCAALRAACAHGRERVVRLFLRKGVCDLSVCDSRVFVDATRSGNSDVVRMLLAIARKGVLDLSLCRYPAVCAAVCHGHASIAKELMIPSDLTLFASNGSAELVRAVLRSPGVDPGADDSEALVVASSSDHDEIVMLLLEDGRSSPGARDSIVLRNAAVRGRNATLAYILSGKVCVPVGAVPADPCANCNESIRMSSANNREECIATLIKDGRADASSCNSFALRVAAERGYEGIVGLLISDRRVGLSADPSACDSESIRIASRLGFINIVSLLLADGRADPGARDSESLMQACGRNHVRIVSMLLADGRVDPSASHSAALRVACRYGHTSIVEMLIATGKVDAAALDNECVRLTIREIAQLGEYHADHHRRGRWHIQLRLLVSTGNRSVCRIVYPATFEAKRQRGMAALADIIALHVLLNPNHPIGRRRLERTFTELVEERDALLLARSGHL* # ORIGINAL: g10300.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 8306 12533 . + . ID=g10300;Name=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 8306 12533 . + . ID=g10300.t1;Parent=g10300;Name=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 8306 8324 . + . ID=g10300.t1.exon1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 8306 8324 . + 0 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 8541 8601 . + . ID=g10300.t1.exon2;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 8541 8601 . + 2 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 8816 8887 . + . ID=g10300.t1.exon3;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 8816 8887 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 8992 9063 . + . ID=g10300.t1.exon4;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 8992 9063 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 9354 9425 . + . ID=g10300.t1.exon5;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 9354 9425 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 9529 9600 . + . ID=g10300.t1.exon6;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 9529 9600 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 9718 9789 . + . ID=g10300.t1.exon7;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 9718 9789 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 9906 9977 . + . ID=g10300.t1.exon8;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 9906 9977 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 10082 10153 . + . ID=g10300.t1.exon9;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 10082 10153 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 10251 10322 . + . ID=g10300.t1.exon10;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 10251 10322 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 10586 10657 . + . ID=g10300.t1.exon11;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 10586 10657 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 10950 11021 . + . ID=g10300.t1.exon12;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 10950 11021 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 11133 11204 . + . ID=g10300.t1.exon13;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 11133 11204 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 11534 11945 . + . ID=g10300.t1.exon14;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 11534 11945 . + 1 ID=cds.g10300.t1;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 12342 12533 . + . ID=g10300.t1.exon15;Parent=g10300.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 12342 12533 . + 0 ID=cds.g10300.t1;Parent=g10300.t1 #PROT g10300.t1 g10300 MLTRDPRHQLSSIASGLFDDLPGLKTLYLNSNHFTTLQSGIFDKLTSLNVLYLSGNQIATLPSGIFDKLTALTVLVFTENPIATLPSGMFDKLTSLSVLYLYSNQIAILPSGIFDKLTALTVLNLNSNQITTVPSGIFDKLTALTDLYLNSNPITTLPSGIFDKLTVLTVLRLDSNQIATLPSGIFDKLTALTELRLISNQIATLPSGIFDELTALTNLQLDSNQIAILPSGIFDKLTALTVLNLNSNQITTVPSGIFDKLTALKDLQLNSNLIVTLPSGILDKLTALTSLSTRSNPGYKGSLCGVLDAHCPTFCSDCICATGWEGDKCTERTGYVYGGKIDFSCVSTVLIPTANAVLVNGPLGTKASLVCKTIDDDGSTLLSCAGRYLMSHPSASPGENLSVAFKVADVVGDVNYVAARIESTGKASILLSTDKDGADVVGTPAFSIEGPSGASTGGGRYTSGTASTDSIVCKASLQSYYIKYVTAQDTQ* # ORIGINAL: g10301.t1 original gene structure, not modified by PASA NODE_245_length_29429_cov_44.2227 AUGUSTUS gene 13738 17013 . - . ID=g10301;Name=g10301.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS mRNA 13738 17013 . - . ID=g10301.t1;Parent=g10301;Name=g10301.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS exon 13738 17013 . - . ID=g10301.t1.exon1;Parent=g10301.t1 NODE_245_length_29429_cov_44.2227 AUGUSTUS CDS 13738 17013 . - 0 ID=cds.g10301.t1;Parent=g10301.t1 #PROT g10301.t1 g10301 MSKRALESLHCAAARGGDDAIETVLSLRKVKKTTEMTTALEQALRIAAENDHADLVRLLLYESGLTVEHDVRAPARTARAGKTAAEVAPVGGAAAKALASNIPLTRRLLECVDAGDAGGVRECLVGGADVSAFNSEGCAVLRVCRGSAPHAKRVLKVLLSHPDAQPNGAAPGVLAGDWSPLKHVVALGRKKCLKALLAHPLLDAHAHCIDNSGINHCDIPPEIVCKYLERHSLLAAARKGVCKPFQDLVNTESKARRIPFAVVDECLAHAAVEGHCDLALLLLLDLSAHPTAPVAAFGDRSALQLVSANSDIHLVLSRNYKTTAELDAAIMGRHFRTIADLLQDSHSGLDPAFSRDGVVAPIVRFVRQVTDARGSSAEASAALRAFLNHPRVDVNATDDSYTKSTPLWIAANAGVTWVAELLLDDPRTTTCSADRLVAAIKANAWTHATDCMRDSALDINKEINHSTPLQCVVGNAGNVSESRYSMGLHTIPDITPQVDLIRLILARPDLDIASEWWSSYEQSFYGMSIMQQATIYAYKCLTRDQRSTGLSSLSMSWIDIMRLFLNAPQPSTNHKLRAALRTNMYEEVVSLLADATVELPFRELINCISNAFYQIDRRDERLESVLRDLCARFIAHPRFVPICAESGQSFLNYAATQSRALIVVEALIAHPGVPSNDRLYAALMHWLFDEALNILRNSDVDVNFAVKDSIPFIVVFLQTDTHLVPELSCEVLRAFLAHPSLDASVGDQALRTAAKAGRHDFLSILLGDSRISKRICAVRWNWDEARVMDVYPGLDVDDNDVRETWRACVRKMMQRYDRTKGQTKSWQYFAPGQGKQYFCDVRNGVFMGALEECVREAVRCGNAPFLRHALSGSLVDGRPIDRHCKGPDGKSAVDIGIEMYDAKHSVRRVLDADNDFCVAFAQEVLSLYHPKDDVDTFNEDNKARLVGVLADPRVDLLAIVRCKVASETSSRAVEPPLREVWTTVGACILGTHSDSEHPTLRPSLGLLRTVLNGDIGFLKLKAFVPALTKRATTAWEVDRADIHPFLCLQTVLEHKSLLHNVLIAPHKKQTLIFKDMQRKGFIPATVGIHRR* # ORIGINAL: g6976.t1 original gene structure, not modified by PASA NODE_2292_length_6838_cov_50.2304 AUGUSTUS gene 1 6838 . - . ID=g6976;Name=g6976.t1 NODE_2292_length_6838_cov_50.2304 AUGUSTUS mRNA 1 6838 . - . ID=g6976.t1;Parent=g6976;Name=g6976.t1 NODE_2292_length_6838_cov_50.2304 AUGUSTUS exon 1 6838 . - . ID=g6976.t1.exon1;Parent=g6976.t1 NODE_2292_length_6838_cov_50.2304 AUGUSTUS CDS 1 6838 . - 0 ID=cds.g6976.t1;Parent=g6976.t1 #PROT g6976.t1 g6976 AKKQSTVVIEESDDPHGVFAFDAESLSVSVAEKDPVTNGISIARLKLIRRGGSFGRAFLSWAASYSGIDGNFAPSAGLVVFEDGQMSAFLELTIVDDDVPELNEAISIQLLSIVGGGRLVDDPAATVSSVVILQNDNPWGSFTFDVQSLTVNETSPPLTLRVVRSGASLLPVNLRFVLSNDGSDAAMGTLIATMPASGSVIEFGVGAVESEIVLTISDNALSDPARLFTFSIEALGGSGGVDGPVVTRTPTNLYVAEDFDYHGVFGLAVSSAVVQEGELLTLVVTRTGGFAGSVSVGWAVNESDGDSIIDVYPTSGVLAFSDKDTVRKVAINVLSDDVPEFRESVHIVLTGADNSGRLDAARATADFAIPANDHPYGHFKLVLSDESTVEEGGVAEFKVVRSGGLFGRVVTLLRTSGTASAGSDFTTPSGTDTFSVVFEAGQSESLVALPIIADSTPEIDEIFSVALVTATVEDRNPLDDEQLPRIEETSVVGFVIPQNDNPFGTVGFGVSERPMRVNEDAGVIRIPLVRTGANLLPLDVAVTLIPGSASFGDASLVTAFITFGPGQLQGEIAVQIVDDDLPEPDESFELMLVVVSGQGAVDGSTLAVTVLQNDDYNGVFRFSVASTHVTEDSRQVAVLVSRERGVAGAVSVAWTLRSDLGGDVTDVNPTQGRIEFADSQHEALIEVSIDDDNIPELDELFSITLSDSMGGATIDPDGAIFSLTIDLNDNPWGTASFAEPQTRAVNESAGTVLFAVERSGGSLLPLVVRVVVSSADVSRRRDSANDYTIVGDLMEFLPGETLKHFSIEIVDDDIPEANETILLVLEAVGEGAVSPPTLSVVITENDDYRGVIGFTSTAVTGAEGNSVLMTVTRERGLGGRIAASWDVTLADGQAAAIDDVQPTHGQIVFAPGQSETAFKFVVVGDSLAELEERFSVTLSAAEGGARIESSSATTVLTVPANDNPYGIVSFDSTSYTADEGTVLQVSVIRSGGTYGALRVGIAAVPGTALNDDFEVQTAFVTILPGAASASVAIVIADDSIPELRETFFVELAGVDIVERVDGDDDLLPALASNGTTATVTIGANDSPHGIVNFDAPNIDDIVVNEDSGAVNLIIRRSGGSFGQIRVFYETETVAQNGAEPGLDYREVSAASIDLFEGETVGSILVDIYNDDVPELDEYFRVRIVAVRVQSQDPLDDGLPASVGAAELATVRIAANDDAAGVFEMEAQSRFQSVERSVGVVRMTVIRKRGSHGAVLVEYATVPRNATADVDFVAVSGTLAFEEGQTSAEITVNVLDASGTPVLDTLFEVVLSSPRLKDEASGLPAPSLGAEKTATVLILRANTPQGYVEFETSEVHACESDGIVAVQLVRLGGDLLAVTFRVYTVDGAVPGNDYVALDTVVSFGVGVRSATLTLSLLDDTISEPERAIAMRLEPAVGSDGLVGAASQISVLLCADDDPAGLFAFSANSTQLSLPESVGAGGQSIRVRLYIERSQGAFSDATVAWQSDPADGLYADIAPSSGIVTFSIGQALGYVEFSIIDDDVPELDRVTTIRLVSVSDGARLSERTEASLTVQSNDDPYGVFDFSTDAITVGEDVGSVSIVIKRSGGSLGAVAVPIQVTSGTALAAVDFRLTADAVVVFGVGQTEGSIRFGIVDDQVPELNETFTVVLGSPHVEENDNASNGPTIGMVASLSVLILANDDYAGEFGLSNAIMSVEESSKFVSITIERRQGSLVSAEVALRTATVDATASSVAHADLDFVPLDRIIVFAVGQTQQTIDIEIIDDDVPEIDESFVVLLTLSGSPTPGAAIAAATSQTAVTIQQNDDACGVFVWAAASRSVSVLETTQMGAGTLVLLSIQRERGTFSRQIVAWSSSGAATGDDYNPQSGEVVFEEGQTLELVELQIAADHVPELDESIIARIVGLQGCGRIGTDAESVAEIVIAENDDARGVFTIDPSSRRIDVGEEAETGQGTEVQVRVRRDKGLFTSQSVLWTTTFDGDDNQFGPTKGTLTFAEDQPFADIVLFVTADNIPERNQTFILQLTAVIGGGLVGATGETSATIIIIENDNARGIFAIESSTRSVVVPEEDEHGIGSVATFFVVRNGGHFYSQTVFWTSSSDTAGKSQYTPNSGALQFADGESYAIIVIFMVRDDIPELNQTIEISLTQIIGGGVMALRDTTAELTILENDDARGVFAIAGSSVSQRVSEEDVDGKGSVVALLIVRTGGAFTEQTVSWTTEGPAGQFSPTSGSVSFGDGIVEMTVLISVLADDVPELDQTVAFG # PASA_UPDATE: g2916.t1, single gene model update, valid-1, status:[pasa:asmbl_7266,status:12], valid-1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . gene 297 1597 . - . ID=g2916;Name=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . mRNA 297 1597 . - . ID=g2916.t1;Parent=g2916;Name=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . five_prime_UTR 1596 1597 . - . ID=g2916.t1.utr5p1;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . exon 1504 1597 . - . ID=g2916.t1.exon1;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . CDS 1504 1595 . - 0 ID=cds.g2916.t1;Parent=g2916.t1;5_prime_partial=true NODE_4388_length_1683_cov_37.5062_potentialcontaminant . exon 1239 1320 . - . ID=g2916.t1.exon2;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . CDS 1239 1320 . - 1 ID=cds.g2916.t1;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . exon 870 929 . - . ID=g2916.t1.exon3;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . CDS 870 929 . - 0 ID=cds.g2916.t1;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . exon 662 716 . - . ID=g2916.t1.exon4;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . CDS 662 716 . - 0 ID=cds.g2916.t1;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . exon 297 479 . - . ID=g2916.t1.exon5;Parent=g2916.t1 NODE_4388_length_1683_cov_37.5062_potentialcontaminant . CDS 297 479 . - 2 ID=cds.g2916.t1;Parent=g2916.t1;3_prime_partial=true #PROT g2916.t1 g2916 IFELSAKQQLPEAEDLLTQGRTANSHQKRRNSNASDFLMAANALTSGSTSQPSPNRSKRLSIFSRPKANSNVGDDLSKAMGLTEALLSPIVDVPKVDDIRVCWTEDMSAGSAGTVTRTISVTRDMKAKDLLVLSLKKFGVTGDETTHSLAVLSQDMR # PASA_UPDATE: g9078.t1, single gene model update, valid-1, status:[pasa:asmbl_8324,status:12], valid-1 NODE_586_length_20551_cov_50.6357 . gene 329 7018 . + . ID=g9078;Name=g9078.t1 NODE_586_length_20551_cov_50.6357 . mRNA 329 7018 . + . ID=g9078.t1;Parent=g9078;Name=g9078.t1 NODE_586_length_20551_cov_50.6357 . exon 329 7018 . + . ID=g9078.t1.exon1;Parent=g9078.t1 NODE_586_length_20551_cov_50.6357 . CDS 329 6919 . + 0 ID=cds.g9078.t1;Parent=g9078.t1 NODE_586_length_20551_cov_50.6357 . three_prime_UTR 6920 7018 . + . ID=g9078.t1.utr3p1;Parent=g9078.t1 #PROT g9078.t1 g9078 MDASSTAAAPADIGGCATDEPSESETKAILDLIDGTVEEDSDDENVPTDGVDELSTAGDGIVDPTKGVERAMRTGEQKMLKTPHGMFAKMLAHPTIFPRHASMTAQTGRDMVVVDGDSIVAAAFRVRAFPKYTEVASPAETPSTRWSRLEEFQSLAAIHDIERLFLGFIENGHQFRVCFVESARDHWSADRVVARDLVQHHIKTRLGGSVALDVIRVNNMDRSVGDRDPSLPIFRTYQEYLLLQRASFMMVDFLWDGDDFTGAPFTQELRTHVAAVAASCLDANIPVVDMVGDDGGILLLSQGEWKSYFVRVPYLPGIRKACTYIMRLACRWLHRSSAALKSENNASRILDDVEVCDAAVRIAGRQATLASTSSAACAMQATSGQTTNPAVFGVVACAVAASSLLVAPECASGGIAWTALAHMAAVTIAGVTPLQVRAQTLISDISNRDGQAPTTTTDELPQLCKFVTALGRSAGRVMRLDTESGLICWDVTDTIDVRMMRAVTAAVEPDGMTGAASDNDAIVEVILRNDSNESLVSRVSIALFGTTADGKRTDEQEAAVSALSHAIKWVFGKVCGSEDGRRSWIAAVGRLLASENNRGTSLGGGSVRAIAADARGGGTGDVQWGILLDGSECALTRRAFGIEEKQQSVNVNAGPSATVFPTFNVDYHYHTGQTLLNMGDALRKEERATLFGDPRGPIAKKWELKGVQKSATYARNRAETLQTEAGGKAKTIVSMGAGSGASSAPTATGSAPKLLQIAGRVRQAKEELDKFEENPEQTLRRLGRSGTVRIPRALPAYPQDWEDDQMRGLRGAKEKDKVRRAAEIAEMRLEWRGLRIRGILAVARVHAMRMGLYIDDGDAGGSRLPSHSVGGDADGSGGDIAELADTLDCGWRLLAQLRKLTHMEPTKEEMSASTRLGRRAVKCLLRPLYAATGVLSVFRRFVSLVEREIATFCKLVSADLEKSARKGIRGGSIELEEGERAADEAKFQLKHMPERLLRTPGVRDARTSFRPDEWQVRLLNAVDEGRSCLAVAPTSSGKTFICYYAMERVLRESDTGIVVYVAPTKQLVSQVYDEVLARFSKTYRSKSEGTAVVGTFTRDFRHHERTCQILVTVPSCAEIMFLSSDTKVLGSGWAQRVRYIIMDEVHNIGEEDGAVWERLILLANCPIIALSATIGNASAFLSWLEYAQETKGRVQMDDGVCAGKGPRGKRDATPAPDALDAGDARPGWNDSDDEGDAEWMLSRLGGPEKVESGQSPLDDGTDKGPRKAAAASNKGKKVPEKHVKGLNAASAAPPPADAVRTTAKKGRQSVSAAASSLVEMIEHSERFNDLSFSVWDSTADATVRFNPLCAVSVRALRNTGKVPRALPLLTPEATLELHAIVAKAISNALSASVVERAHVGTPGHLRYQRLSAAQKLLVDLRPANRFPDAANPISMRDAHAYSRAVVDVVVKLSQTDFDVAEAVMSVLSEPSERALNEARATWGFTDIDVGLRNAIPGAVAALQRERLLPGIVFHLSQNGCMKMALECSAALRKKQESINLARKDSDRAEALALVEKKNTAMGMRDRAAEQGDARASGECNNKVEECIRALNAIASRKYLRQEATLFAGESRFDAPTVDELREALRDDSLTEASVFADDVLDALRRGIACHHAALGTRYRMAVESLFRAKKLRVVFATGTLAQGVHMPCRTVVIAGDSNFLHSLSFAQMTGRAGRRGLDTRGNVVLLNLSKEKIAQVIGGDFPSIAGNRVLTVATVLRLLVRAFQGGDECIGTVAAELRRLVDGSIVAHARPSFKSVARRFVHYALDHLRREGIVDAHSISPYNIAGLVTHLHYLEPGCTLVGVLMQDSAFLQSLDAVSDRISAVAMAAYKENRRLETVPREATELVLGVLSTVIGVVPIRKSQVESLARRKPGTFLSRVALVAARDLPPAFVETAAKYNERALGLLVAHLKAHVGERADNATGDLDPDSTDSADWRRLPLSEGSHVPREEGHQGKRAQSNSFPTGTASSHAGIVGRLATNANKVVLRNPYWAMRGLGDDFSSADELRTTARSDLHTMLLDAPAFAVGAVNSYALDFLRHGQKGRIQTENMMQDAVAYKLLDEFLLGLTAAAVALFKNMDAVVANHFMGTMGIRARVDPSSLCVLVDDGDASLQKMWPDARLEPGIRMQLNVVRVLVADTRKFKERMAFFNVRGRSE* # ORIGINAL: g9081.t1 original gene structure, not modified by PASA NODE_586_length_20551_cov_50.6357 AUGUSTUS gene 19750 20378 . - . ID=g9081;Name=g9081.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS mRNA 19750 20378 . - . ID=g9081.t1;Parent=g9081;Name=g9081.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 19750 20378 . - . ID=g9081.t1.exon1;Parent=g9081.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 19750 20378 . - 2 ID=cds.g9081.t1;Parent=g9081.t1 #PROT g9081.t1 g9081 FPVVESTENPALVGLILRSQLEAILEAQKPQLMKSASLRATSSTAVEGLTGSHTDATSTAVEMSIIVNPPSTALLNADNAGAGDARIHGRSLSTVAREASAPILSVQMYAMEYAHTEIDLTDHMNRSPSTALASWPIAKAYATLRNLQLRHLVVVDPQWRVIGMITRKDVVDVTHGGLRDTHGSQGGHGHGGATSGSGSSHNRKGVGV* # ORIGINAL: g9079.t1 original gene structure, not modified by PASA NODE_586_length_20551_cov_50.6357 AUGUSTUS gene 7534 13070 . - . ID=g9079;Name=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS mRNA 7534 13070 . - . ID=g9079.t1;Parent=g9079;Name=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 12330 13070 . - . ID=g9079.t1.exon1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 12330 13070 . - 0 ID=cds.g9079.t1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 10094 12205 . - . ID=g9079.t1.exon2;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 10094 12205 . - 0 ID=cds.g9079.t1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 9660 9785 . - . ID=g9079.t1.exon3;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 9660 9785 . - 0 ID=cds.g9079.t1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 8803 9452 . - . ID=g9079.t1.exon4;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 8803 9452 . - 0 ID=cds.g9079.t1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 7943 8663 . - . ID=g9079.t1.exon5;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 7943 8663 . - 1 ID=cds.g9079.t1;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 7534 7686 . - . ID=g9079.t1.exon6;Parent=g9079.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 7534 7686 . - 0 ID=cds.g9079.t1;Parent=g9079.t1 #PROT g9079.t1 g9079 MSTLAQRSVSSDGEMDAAPVYEDALDDAAWPVRVEVVPESQVDEHNNDDESVHDEPAGAQLDVERDESFEDQGLSRTRTLERPSETPVVVGSSSLQAPSIPPASSSNNDEDEYYGDPSEMSVNRTRELGPAWDSEYTDDTEGDAHVDASAQGPRATIENVPSKVHEEMQEEHLHRYTSPESARERLTAANDVVSDVAVDAGESTGLLEKVDYPPLVEDMSRDEAFAEMQRRRREQQMRRKELEERPLGTDAQPQTGGRVSASHQEQEHDTTDIAIRLDAPTARSHHLHHDHHSNQQRPKAAHSHAPTQSHARAYDDETMESDEAAQFRTGMSERPSRALGAAPPERPSMRTDSNDDSAEEDRYSRIAHASVGAPSHSNAHAKPDVSAHHMRNDDAPRPLTARDVDSPRATVAGSSSGAPMSAVQKTAASSESSPSATPRHGSGRRKWDKSSAATVGIPLFMREDTEFIPIADSNERLRDIFLDSAGESVADDEASDGHDHVVARRRTYGGEQLRKGARPVGYGTVTHDPAHPDEWLSLEGGERGHENADGAVYAAADGPRQRVVLVGRDASAGVSQSAHAQGQRAHAAGYPHSHAQSHAGGDRRSLGSLLPGGGEYAHGDVRSTVRDDPSAYRVSFDADVRKIAGSNLRGAARVTDDSYDPDRYADEDDAAPERLRQSAYAAATRPHGAAIGSSSQSYSVGFDDGDENAVRGSYSTRPATSVSGLLFDDVGTRVSMQSQGPGIGAVLERMQHHYEAQMEVQTQRHTQQMALLQGQIERQASLYEALLAQVQGQRDAVRHEASIAAATYSAQNLPSSQQRALGSSTERKTADANAVAMDNAAINAEAKRVVESHARKLREETSAAIAMLESTNSSLGTRCKALDESNKVLLARCKALEGLAAARRSGPTPMEKEALERERAEASSQLAHATRALTESEEQRAKIMGDLDELQAEHQRVLADIQDILHKRKGEQSMVKQLLQENELFRRDIKSTKDALEAALVKYDGVRADKQRLEADCADLQQQLQKVGREARDLRHEVASLRGRIQTPIEGARGQQQLQQNARNSNAQVAHNPQQHGAYPSNPYERDASPGYRSDVRAQIAEEEEAQRAHHQQQQQQQILQRIALQQQQQLQQLQQQQLKQQQQQQHQQQQLHQQQVLLAQQQHAAQTRRSMPPAMPSHYDERGRNENAFAGEDRERGRDALRHRDEQPRRSHDPTNARPGTAQGSQQQQQQQGAVSRPQSAGIVRGGPTAESSSATYSQPRDAAVDAIRGRIRMLQQLQEAQLADMPHRKMERPSQFGDDDSVDVDDADIDTEHISTHAVHRGDRRHVDAHVNSAAPSSQAAWGRRDDDDDNAYNGTPDDAEYGGGGREIEGLPRRGLNVGVNREQLDEEYEWVRQQEAASSAVPVGAGGGGHAVRADGTRAGGLEGAGVDMIPALEHELMRLSMEKDRLESDFRKLPPGAGSTMAARQTKEGIERRLEQLSREIGAVKMALRKFNVLK* # ORIGINAL: g9080.t1 original gene structure, not modified by PASA NODE_586_length_20551_cov_50.6357 AUGUSTUS gene 13553 19315 . + . ID=g9080;Name=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS mRNA 13553 19315 . + . ID=g9080.t1;Parent=g9080;Name=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 13553 13684 . + . ID=g9080.t1.exon1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 13553 13684 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 13808 13924 . + . ID=g9080.t1.exon2;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 13808 13924 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 14136 14651 . + . ID=g9080.t1.exon3;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 14136 14651 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 15194 15310 . + . ID=g9080.t1.exon4;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 15194 15310 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 15531 15755 . + . ID=g9080.t1.exon5;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 15531 15755 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 15913 16116 . + . ID=g9080.t1.exon6;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 15913 16116 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 16323 16664 . + . ID=g9080.t1.exon7;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 16323 16664 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 16901 17677 . + . ID=g9080.t1.exon8;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 16901 17677 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 18014 18564 . + . ID=g9080.t1.exon9;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 18014 18564 . + 0 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 18798 18914 . + . ID=g9080.t1.exon10;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 18798 18914 . + 1 ID=cds.g9080.t1;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS exon 19120 19315 . + . ID=g9080.t1.exon11;Parent=g9080.t1 NODE_586_length_20551_cov_50.6357 AUGUSTUS CDS 19120 19315 . + 1 ID=cds.g9080.t1;Parent=g9080.t1 #PROT g9080.t1 g9080 MRSAESRQSGAGPASPTAPAHPDAEADRLFCKHTISEIRVIEKRIRGDIERKKEELRQMVGERYRDLIGAADSIMTMKTASDQIQDGIEKIDTLCRQAGRFRDSDAATDGSKKADVAVPASMHASARPRAAFYSAATQMKLLVDTPEQIWGALERREHLRAAQLYLIAEYMFANISIDEVSAVGVGHVPLESAQQRGSLLASFPILNRQWAAIGHFRDPILQGARGDLAAETIDEASLADAACTVVLLDDRTPKEVLAEYLAARTALIRSLFRPEGFAATTAKEQICRVVRVVKTTLSTAHNVFFSRGSAASEANAAAAVFPSGKLAAALRHVTAGEDAADVPYIARLFTGGSMHAIVRNLPHNVQKFRPTSHLHTTSIRSDPAKTRAECQLLASEWLVSASSIVSEGATGALAGVQTVKSLRSLADAVWDTLNDGKDSSEDWSELCIGLVGRVVPLWDLLLRHHVVARAKEMLEVAFSRLSRVPGEMIAGSASSPVHEDVGAWVWSDEGDQMQIDQNSGGAVGGGGYAFASGSVGGLVAAVDLANPLALKSIGVTPFVRDVCAKFDSSLAGILDDARHAFGSPDDDRGHVSASIPADEPLRGGAHGPFDRRDDGGDMRAHVRTLCHTCVIAVAADLTDVHEAARATVDAYAASRRVAHGVSNGGSGGPVVVDAAQARAAGSSVLLVGRVALGVAQHCRSLQDAMRLSDGSEQRESALRRSSSGGARTPTPRMTPTRQASLTAGAASKVEFDARLEEGRKVLRALHAACHHTWAVCLSHCLGAELEGGLREEDWMDPIIARSAWEDVRIQEETEGGDRVDTVVRLPAHLSRAPLAFVRELCSSLNACAAHALDRAILLDAVQLAADEALGIFERFASSRTVDSSPSSRDGAAVGTIQDGRANGSVHAAGDHSDGGVDAAASRISQDGCLQALFDCRLLFDLLSARLLPQCHPQLVDFAARRDRLISLWTSKIDPFDMDVFSPHMRANVIKAYQRSSVLFGTVASLNRLYGDQKRAMQTHEAHSALAVAPVAPRFALLPISATAAAPAKAPSWQQAAARPMDRPRPASSTSSSKHAHHKTSSAPAQTSRGLFGGTGLF* # ORIGINAL: g4686.t1 original gene structure, not modified by PASA NODE_2451_length_6211_cov_39.5709 AUGUSTUS gene 5911 6120 . - . ID=g4686;Name=g4686.t1 NODE_2451_length_6211_cov_39.5709 AUGUSTUS mRNA 5911 6120 . - . ID=g4686.t1;Parent=g4686;Name=g4686.t1 NODE_2451_length_6211_cov_39.5709 AUGUSTUS exon 5911 6120 . - . ID=g4686.t1.exon1;Parent=g4686.t1 NODE_2451_length_6211_cov_39.5709 AUGUSTUS CDS 5911 6120 . - 0 ID=cds.g4686.t1;Parent=g4686.t1 #PROT g4686.t1 g4686 MGAMFTKVGKPEETVKLYKRALRIRVDRLGPDHPYTIRIRDNLNRALGRVGRSSDSEADVADLFQTYWR* # PASA_UPDATE: g4685.t1, single gene model update, valid-1, status:[pasa:asmbl_4344,status:12],[pasa:asmbl_4345,status:12], valid-1 NODE_2451_length_6211_cov_39.5709 . gene 2110 5637 . + . ID=g4685;Name=g4685.t1 NODE_2451_length_6211_cov_39.5709 . mRNA 2110 5637 . + . ID=g4685.t1;Parent=g4685;Name=g4685.t1 NODE_2451_length_6211_cov_39.5709 . five_prime_UTR 2110 2233 . + . ID=g4685.t1.utr5p1;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . exon 2110 2326 . + . ID=g4685.t1.exon1;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . CDS 2234 2326 . + 0 ID=cds.g4685.t1;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . exon 2579 4544 . + . ID=g4685.t1.exon2;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . CDS 2579 4544 . + 0 ID=cds.g4685.t1;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . exon 4796 5637 . + . ID=g4685.t1.exon3;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . CDS 4796 5106 . + 2 ID=cds.g4685.t1;Parent=g4685.t1 NODE_2451_length_6211_cov_39.5709 . three_prime_UTR 5107 5637 . + . ID=g4685.t1.utr3p1;Parent=g4685.t1 #PROT g4685.t1 g4685 MMMRSSNVAVVMAVLVAMGALADAHKCIHDTFIGNIKHTHTAQDYSDRRRAVGDTYSPIRFSVTYGSFADTTTDKADYVQKTLMPAAIARLNGLLSVLPVTGNLIVKQPCKTLYTSGNLAGKCATVSATFTCGSATVPTSHYTTETCTGQGVCTTTNNGTGVPNTDMVFYVESRATDLCNGGSAIAYAHHCTLDQYDRPVSGYVNFCPSMIETEATRYQSMLSTALHEMTHALGFSGSLFGRWRDENLNPRTARDASKNPINNEAGNTTVKSFTERGYTLQKLVTPAVMKAAKLHFGCDSLNGAELESQGGDGTAGSHWESRIFLDEYMVGADRPGQAFSALSEMTMSALADSGWYKINWTAVEPLVWGRGLGCSFATEKCLSGSPPKANFPFCTDTADDCSYDGTSRGLCNVATYGSNLSAEYQYFSDPKVGGTYDFADFCPFVAAYSNGDCRTTANANTNGVNVFGNTWGANSRCFKSTLIKTGFSGTVPPGCFETECKVGDDGIKYYNVRVNGGSFVRCDSGKTLSFAGFNGVVTCQPVDRVCGIAVLPLGNTAPSSSAAASPAPPPASSAPPAGSSAPPAGSSAPPAGSSAPPAGSSAPPPASSPANNPPPSSSPKSNPPAASSPPPSNPPPSGSPTNGAPSPSPTGPSQRIPSVAVHAASGYVVICDSLCVRTAVPIKSIMPLFTLGDNKVFAGVGNSTSLELFIQDKSTGVYQISTDLGKTFGDFPAQLVSTTRIGQVYTIDFAKNTTIAVGPTGTTLFGTQRGIGPTGGDEMIRWRCDGCSK* # PASA_UPDATE: g4684.t1, single gene model update, valid-1, status:[pasa:asmbl_4343,status:12], valid-1 NODE_2451_length_6211_cov_39.5709 . gene 225 988 . - . ID=g4684;Name=g4684.t1 NODE_2451_length_6211_cov_39.5709 . mRNA 225 988 . - . ID=g4684.t1;Parent=g4684;Name=g4684.t1 NODE_2451_length_6211_cov_39.5709 . five_prime_UTR 921 988 . - . ID=g4684.t1.utr5p1;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . exon 833 988 . - . ID=g4684.t1.exon1;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . CDS 833 920 . - 0 ID=cds.g4684.t1;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . exon 553 695 . - . ID=g4684.t1.exon2;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . CDS 553 695 . - 2 ID=cds.g4684.t1;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . exon 225 396 . - . ID=g4684.t1.exon3;Parent=g4684.t1 NODE_2451_length_6211_cov_39.5709 . CDS 225 396 . - 0 ID=cds.g4684.t1;Parent=g4684.t1;3_prime_partial=true #PROT g4684.t1 g4684 MSAANLKCVSGTLKLTIARAEGLKACDVGGSSDPYCILVVDGKETPVKTKPVKKTLAPVWDAEFRFPLKDARLLRFSVFDHDLVGKDDIIGVANLEAYALHASGGNYEKTLPLKPSGSLTVKIEFAPRVAKCDS # ORIGINAL: g14221.t1 original gene structure, not modified by PASA NODE_3907_length_2533_cov_32.2555 AUGUSTUS gene 154 2345 . - . ID=g14221;Name=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS mRNA 154 2345 . - . ID=g14221.t1;Parent=g14221;Name=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS exon 2285 2345 . - . ID=g14221.t1.exon1;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS CDS 2285 2345 . - 0 ID=cds.g14221.t1;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS exon 1715 1899 . - . ID=g14221.t1.exon2;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS CDS 1715 1899 . - 2 ID=cds.g14221.t1;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS exon 1222 1351 . - . ID=g14221.t1.exon3;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS CDS 1222 1351 . - 0 ID=cds.g14221.t1;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS exon 855 966 . - . ID=g14221.t1.exon4;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS CDS 855 966 . - 2 ID=cds.g14221.t1;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS exon 154 257 . - . ID=g14221.t1.exon5;Parent=g14221.t1 NODE_3907_length_2533_cov_32.2555 AUGUSTUS CDS 154 257 . - 1 ID=cds.g14221.t1;Parent=g14221.t1 #PROT g14221.t1 g14221 MSPLVACRHCHCRIFYQISRGVDYLHTQNVIHRDLKPNNILIDTHGDAKISDFGLSRRANPDDPLTTRCGSPIYAAPELFGKSYHGAQADIWSCGVILFNMVTGLHPFGVDVTEPLASMYKRITTSHLFLPSHLSEDVCDLTRGILTVDPAKRYTMPTILAHNEAVQSAVLEAGDVGQWEFIGLEKDTQLFLQVDNN # ORIGINAL: g7801.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 18458 24505 . + . ID=g7801;Name=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 18458 24505 . + . ID=g7801.t1;Parent=g7801;Name=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 18458 18683 . + . ID=g7801.t1.exon1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 18458 18683 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 18818 19972 . + . ID=g7801.t1.exon2;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 18818 19972 . + 2 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 20180 20331 . + . ID=g7801.t1.exon3;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 20180 20331 . + 2 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 20561 20677 . + . ID=g7801.t1.exon4;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 20561 20677 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 20831 21373 . + . ID=g7801.t1.exon5;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 20831 21373 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 21630 21881 . + . ID=g7801.t1.exon6;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 21630 21881 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 22134 22247 . + . ID=g7801.t1.exon7;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 22134 22247 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 22437 22643 . + . ID=g7801.t1.exon8;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 22437 22643 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 22800 22925 . + . ID=g7801.t1.exon9;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 22800 22925 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 23138 23229 . + . ID=g7801.t1.exon10;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 23138 23229 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 23536 23755 . + . ID=g7801.t1.exon11;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 23536 23755 . + 1 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 23979 24227 . + . ID=g7801.t1.exon12;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 23979 24227 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 24365 24505 . + . ID=g7801.t1.exon13;Parent=g7801.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 24365 24505 . + 0 ID=cds.g7801.t1;Parent=g7801.t1 #PROT g7801.t1 g7801 MHLYSFTLERPSAITHAIHGNFAGTKTQEIVVSRGRIIELLRPDANTGKIISVLSVEVFGVIRSIASFRLTGASKDYIVVGSDSGRIVILEYNPTKNVFDKVHQETFGKSGCRRIVPGQFLATDPKGRAVMIGSAEKQKLVYILNRDAAARLTISSPLEGHKSHTIVFAIAGVDVGFENPIFACLELDYEDADNDHTGEAARTAQQTLTYYELDLGLNHVVRKSSEPLSEMANLIIPVPGGNDGPSGVLLCAEGSITYRNEKHAVRCAIPRRRNDISDAERSPLVVAYTSYKTKSLFFFLLQTEQGDLFKVTLSVVEDVVRDIRIKYFDTVPTASSICLLRSGFLFVASEFGNHNLYQVAHLADDDEEADFGSADEGATYSPRTLRNLVHVEEIESLSPVTDCKVADLANEDSPQLYALCGRGTRSSMRVLRHGLPVSEMAVSDLPGTPTAVWTAKKSARDPHDAYLVVSFVNATLVLSIGETVEEVTDSGFLGTVATLAVSQLGEGDLLQVYNEGIRHIHAHEGGNRRISQWRPPAKKYITRVAANERQIVIALTGGELVYFELDATGNLNEHTERRQIGNDVRSLAIGAVPEGQVRSRFLAVGDSENTVRIYSLDPQDCLQPLSMQALPTAAESLCIAEMAGGFGSGAEGDHSALFLLVGLDNGVMLRSVLDNVTGVLSDTRTRYLGSRGVRLFRIRAQGSDAVLALSSRPWLSYPHQARIQLTPLSYQSLEYAAGFSSEQCPEGIVAVSGTTLRIVAVERIGAVFNQSSVPLQHTPRKMVIHPQTNYIISIETDHRQYSEQNKRVLREQVALANDDMITEEEELPEDVFGAPTAPAGTWASCIRVIDPIQGKTLHVREFDDNEAAFSVGVCAFHGRDGEVFVVVGTAKDLVISPRSSSGGFLYTFRMVDEGKQLELYHKTPVEDVPGAIQAFQGRIVAGVGNLVRIYDLGKRKLLRKCENKHVPNFVTSINTMGPRIVVGDIQESFHFLKYRPTENQLTIFADDTVPHWLTCATMLDYDTMAGADKFGNVYIVRLPADCTDDIDDDPTGARSVWERGVLNGAQQKVEVLVNYYIGDTVTSLQKASLVPGAPDALVYTTLMGSVGALAPFTSREDIDFFQHLEMHLRQEASPLLGRDHLSYRSYYFPCKNVIDGDLCEQFNALDANKRRSIAEELDRTPAEVAKKLEDMRVRYAF* # PASA_UPDATE: g7803.t1, single gene model update, valid-1, status:[pasa:asmbl_3723,status:12], valid-1 NODE_218_length_30995_cov_42.4687 . gene 25948 28764 . + . ID=g7803;Name=g7803.t1 NODE_218_length_30995_cov_42.4687 . mRNA 25948 28764 . + . ID=g7803.t1;Parent=g7803;Name=g7803.t1 NODE_218_length_30995_cov_42.4687 . five_prime_UTR 25948 26031 . + . ID=g7803.t1.utr5p1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 25948 26177 . + . ID=g7803.t1.exon1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 26032 26177 . + 0 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 26412 26496 . + . ID=g7803.t1.exon2;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 26412 26496 . + 1 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 26617 26781 . + . ID=g7803.t1.exon3;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 26617 26781 . + 0 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 26923 27507 . + . ID=g7803.t1.exon4;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 26923 27507 . + 0 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 27701 27772 . + . ID=g7803.t1.exon5;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 27701 27772 . + 0 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . exon 27948 28764 . + . ID=g7803.t1.exon6;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . CDS 27948 28607 . + 0 ID=cds.g7803.t1;Parent=g7803.t1 NODE_218_length_30995_cov_42.4687 . three_prime_UTR 28608 28764 . + . ID=g7803.t1.utr3p1;Parent=g7803.t1 #PROT g7803.t1 g7803 MPHGAPAGGGRDGRVATHADPAHAHVESALPSLLRTYASGRTSQATAATRTTSPSESPRTRRRKARIDDAEEKDRLKRAEAVLDALERFKREMRDVRAKELKTKLAMQHEERRLREEIENRKRAHEEKAREQAEQRRREEFQRKRNDQKTKERHKSDDGSRAHGVAMHAGTDGLAAAHANVYASSSLNADVVSVAGDRRASRMGSAESSATKTSNQMASSSVRSEQAREQAREFAVHEPVSPADTALRGKKGEDVLLGVAKDNSAHRVKQSLSIPTSPRKVRAPREKSVQTRTAEVAAERSVEEMYNEMFGDRYLKNDDEEVAASANSQRAARRPPPRIHGAKNTQEFTEQVSVMYRMAQRNKEKAKKMMSENPPPDVLMYADEFGFSKYVATPGSRSTGPLDQSRPVTRPTLDASLAGMNFSFGSRSAVAAATQAAATPASASGHKTSLGDAAHQQSKSPELYAYGDNRGAQYAPAVNYIDRHNLWQQERLNSLRKDMEAGRGDGGGAESLEALRPAGVARPRGWEPLDLGSLEEYSPARGSTCAFACKAGSGCTHNFKFIKSTVWKVT* # PASA_UPDATE: g7802.t1, single gene model update, valid-1, status:[pasa:asmbl_3724,status:3], valid-1 NODE_218_length_30995_cov_42.4687 . gene 24736 25631 . - . ID=g7802;Name=g7802.t1 NODE_218_length_30995_cov_42.4687 . mRNA 24736 25631 . - . ID=g7802.t1;Parent=g7802;Name=g7802.t1 NODE_218_length_30995_cov_42.4687 . five_prime_UTR 25588 25631 . - . ID=g7802.t1.utr5p1;Parent=g7802.t1 NODE_218_length_30995_cov_42.4687 . exon 25489 25631 . - . ID=g7802.t1.exon1;Parent=g7802.t1 NODE_218_length_30995_cov_42.4687 . CDS 25489 25587 . - 0 ID=cds.g7802.t1;Parent=g7802.t1 NODE_218_length_30995_cov_42.4687 . exon 24736 25358 . - . ID=g7802.t1.exon2;Parent=g7802.t1 NODE_218_length_30995_cov_42.4687 . CDS 24843 25358 . - 0 ID=cds.g7802.t1;Parent=g7802.t1 NODE_218_length_30995_cov_42.4687 . three_prime_UTR 24736 24842 . - . ID=g7802.t1.utr3p1;Parent=g7802.t1 #PROT g7802.t1 g7802 MTDFDRKRRHVQEWLANADGSAPEEAPEMDDGEIEGPRPPKGQPPSSRHNRLPAKPAQTLPEVQRTAAYTKGGRPQPPPLDSKRIGARPTRRLAGQTVGEVSVYNPRLSEPADADCDDDEGLDLMRDIEEETQIISALKEQLRLQRLLLEQEYTLQQQSQGTDAPPVGGYANDGPSPVNGGRDSALGSLSASSNRSGSRSGSRR* # ORIGINAL: g7799.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 14615 15585 . + . ID=g7799;Name=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 14615 15585 . + . ID=g7799.t1;Parent=g7799;Name=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 14615 14858 . + . ID=g7799.t1.exon1;Parent=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 14615 14858 . + 0 ID=cds.g7799.t1;Parent=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 14993 15087 . + . ID=g7799.t1.exon2;Parent=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 14993 15087 . + 2 ID=cds.g7799.t1;Parent=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 15241 15585 . + . ID=g7799.t1.exon3;Parent=g7799.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 15241 15585 . + 0 ID=cds.g7799.t1;Parent=g7799.t1 #PROT g7799.t1 g7799 MTAETTDPAPADVDGVDAATDHNGAKRPETLSEYAALYSGELASAIFLALTVYYAYAQTVSHGAKSVVSFCVAGYYMFLFLDWAFHLVLHNRRIMEKTALTRMMLKAHTDHHKRYTPKYMLTEYYASDNGHYAFGPFILAVYAVAWGFMPSAWLGLFLTQTTFLIISADTIHQQQHVRGSYLNRFQWFRKLKAVHRLHHVHTSKNLAFLDHSMDVIMGTFKNPPNVQ* # ORIGINAL: g7798.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 10984 14043 . - . ID=g7798;Name=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 10984 14043 . - . ID=g7798.t1;Parent=g7798;Name=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 13985 14043 . - . ID=g7798.t1.exon1;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 13985 14043 . - 0 ID=cds.g7798.t1;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 12593 13862 . - . ID=g7798.t1.exon2;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 12593 13862 . - 1 ID=cds.g7798.t1;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 11671 12473 . - . ID=g7798.t1.exon3;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 11671 12473 . - 0 ID=cds.g7798.t1;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 10984 11233 . - . ID=g7798.t1.exon4;Parent=g7798.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 10984 11233 . - 1 ID=cds.g7798.t1;Parent=g7798.t1 #PROT g7798.t1 g7798 MGDSERADKANGRLTQSILKLPSRSSGLFGDPLGGHFGDPLGDERGTLVRRQRVSKLPRSFPLYFAPHKSDPHDLPPLLDWMLLLSLKKWHSHSPRALDVFQAARQMELDAPRLAADAQSWDPSPFFIRAPKPPRLHNVNLCDWDDTSSDSTTENDGGARNPSTATYGRGGRASPVFDKYVSPAAKRSRDMLLSSSSDDDSSYEEFKASSLLHSKRGKQKVALPNRAPQVKSPVTAISKSASPQNVVQGEASPHLDSPIIRTKRARKRARAWDSEKDNDSDDVELPTYLAVATGCPATAATAIKADAPPASSLLVTDKKGSFSQVPEATPTKQQRKIPLPGSARVYTPLNAAALASRKRRASQSDEDATGVNNGSDSDSGPVGPRRSLLRRKTARVIASQESVKSSSGDDVATAAVNAAVTARDITLRGIDGTRRAEPPDRSMECPMCLKYFSESELQKHVNECLDGAPVVAPPVVNRPPPRRVIECPICQLDLDAMTIAERGGHVNKCLSVPLPARIERTGSGVRGRALTAAREQSVDAMSQELFSSPPAKPARSVTAPKAFFRPNSAAAVDPIVIDDDDDDEVGDSTHESEVEEAKEAEEAEEADDAERVDGEESDDDGYADGQVDDIDEFAEEDGDASGNHEAGRGGEQEASYVPRHLKRISDDKNCLVNYKSMLDPPKKGAPRGRKAKVERADASSESRGKKKSWRGRGKRGRQSLGYARRGGGEWRGGRGGGGAKQAPARGRGSAGGFGNISNNPDMEVVYAGETIEFDDRKVPWQTTNTASMGKRMK* # ORIGINAL: g7805.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 29923 30544 . - . ID=g7805;Name=g7805.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 29923 30544 . - . ID=g7805.t1;Parent=g7805;Name=g7805.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 30397 30544 . - . ID=g7805.t1.exon1;Parent=g7805.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 30397 30544 . - 0 ID=cds.g7805.t1;Parent=g7805.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 29923 30230 . - . ID=g7805.t1.exon2;Parent=g7805.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 29923 30230 . - 2 ID=cds.g7805.t1;Parent=g7805.t1 #PROT g7805.t1 g7805 MHAAPWAQRRVWVAACAFVVIVTILLTLVRVNSADRNGFFLGDVFGLPGAAAPMHGQPDASGELADSTSGALSALELAHSGVGIHAPTPSPDSMGGTWSLAEIRQSCAIERLDNTATHGPTESSAPCRARRIIVPTSAPAVSISSLAQLSV* # ORIGINAL: g7800.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 15725 17477 . - . ID=g7800;Name=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 15725 17477 . - . ID=g7800.t1;Parent=g7800;Name=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 17342 17477 . - . ID=g7800.t1.exon1;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 17342 17477 . - 0 ID=cds.g7800.t1;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 16878 17001 . - . ID=g7800.t1.exon2;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 16878 17001 . - 2 ID=cds.g7800.t1;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 16662 16748 . - . ID=g7800.t1.exon3;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 16662 16748 . - 1 ID=cds.g7800.t1;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 15725 16568 . - . ID=g7800.t1.exon4;Parent=g7800.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 15725 16568 . - 1 ID=cds.g7800.t1;Parent=g7800.t1 #PROT g7800.t1 g7800 MDSVSVRIYQPIHPDGFAAGELLSGELVVPRRVCLKSAVLRFAGKDDRGKQHEAKEYLAIRPDSMGVARAKDASRANHIITQGIKLCSSNGSIVATLSLGRRIVLPGDTVEATVMIHNHTDATVRGVRLKALQSLAMRTVNKGPLSVVRTKCFDDILCETSMTTLSVAPHTSKSTRVTLQWPDAAQNPRHPEGFTCAETPACENSISDLFVNDGGLKGRFAPGNGLLLREQQCENEDRRRHSLEALTISHSLQVAVEMEGDAGIPLECASGCISALRLQSGDPATDSHGHYIVATIPITVAALPGNATHRRNASLRQSRRAASNNGAGIRSHGVGRGIRAEEAGVVADIVVGKFRLRRHPRYQSEMCVMQKPAVEVHVTPPTPVSDLSIRSFNFGF* # PASA_UPDATE: g7796.t1, single gene model update, valid-1, status:[pasa:asmbl_3720,status:12], valid-1 NODE_218_length_30995_cov_42.4687 . gene 181 2900 . + . ID=g7796;Name=g7796.t1 NODE_218_length_30995_cov_42.4687 . mRNA 181 2900 . + . ID=g7796.t1;Parent=g7796;Name=g7796.t1 NODE_218_length_30995_cov_42.4687 . exon 181 423 . + . ID=g7796.t1.exon1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 181 423 . + 0 ID=cds.g7796.t1;Parent=g7796.t1;5_prime_partial=true NODE_218_length_30995_cov_42.4687 . exon 1001 1423 . + . ID=g7796.t1.exon2;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 1001 1423 . + 0 ID=cds.g7796.t1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . exon 1595 1663 . + . ID=g7796.t1.exon3;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 1595 1663 . + 0 ID=cds.g7796.t1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . exon 1807 1981 . + . ID=g7796.t1.exon4;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 1807 1981 . + 0 ID=cds.g7796.t1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . exon 2150 2248 . + . ID=g7796.t1.exon5;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 2150 2248 . + 2 ID=cds.g7796.t1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . exon 2502 2900 . + . ID=g7796.t1.exon6;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . CDS 2502 2704 . + 2 ID=cds.g7796.t1;Parent=g7796.t1 NODE_218_length_30995_cov_42.4687 . three_prime_UTR 2705 2900 . + . ID=g7796.t1.utr3p1;Parent=g7796.t1 #PROT g7796.t1 g7796 DFGLIDFRSHVDTADISDYKYYAGMLWTAPELLGDMPPRGTVTCGTPKGDIYSYGIVMWEILTRDLPFSDQDLPMETLLKQIRTQGLRPVFPEEPESGSKTFQAFIETCWAQDPDARHTSFDVVLKEMDRLHPKSRNLVDNMIRMLEQHSANLEGLVDERTRALEVEKERSEELLFRMMPKVIAVELKVGRIVPPEQFDSVTVYFSDIVGFPLLASKSNPFQIVDLLNFLYNTFDAIIEGRDVYKVETIGDVYLIVSGLPVRNDGRHAAEMADLSLDLLAAVRNVEIPFIPGSQIQLRIGLHTGPAVAGVVGLKMPHYSLFGDTINTASRMQTGGLALRVHISESTALALMKQGDVYDLEFRGESIIKGKGKMNTYFLRGKKGYTKLLPDLSRAATLSQHDFK* # PASA_UPDATE: g7797.t1, single gene model update, valid-1, status:[pasa:asmbl_3721,status:12],[pasa:asmbl_3722,status:12], valid-1 NODE_218_length_30995_cov_42.4687 . gene 3420 10610 . + . ID=g7797;Name=g7797.t1 NODE_218_length_30995_cov_42.4687 . mRNA 3420 10610 . + . ID=g7797.t1;Parent=g7797;Name=g7797.t1 NODE_218_length_30995_cov_42.4687 . five_prime_UTR 3420 3747 . + . ID=g7797.t1.utr5p1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 3420 3807 . + . ID=g7797.t1.exon1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 3748 3807 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 4008 4080 . + . ID=g7797.t1.exon2;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 4008 4080 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 4242 4330 . + . ID=g7797.t1.exon3;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 4242 4330 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 4526 4675 . + . ID=g7797.t1.exon4;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 4526 4675 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 5203 5328 . + . ID=g7797.t1.exon5;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 5203 5328 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 5477 5527 . + . ID=g7797.t1.exon6;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 5477 5527 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 5705 5750 . + . ID=g7797.t1.exon7;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 5705 5750 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 6031 6456 . + . ID=g7797.t1.exon8;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 6031 6456 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 6630 6740 . + . ID=g7797.t1.exon9;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 6630 6740 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 6946 7060 . + . ID=g7797.t1.exon10;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 6946 7060 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 7270 7468 . + . ID=g7797.t1.exon11;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 7270 7468 . + 1 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 7708 7810 . + . ID=g7797.t1.exon12;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 7708 7810 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 8029 8222 . + . ID=g7797.t1.exon13;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 8029 8222 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 8474 8561 . + . ID=g7797.t1.exon14;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 8474 8561 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 8882 9045 . + . ID=g7797.t1.exon15;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 8882 9045 . + 2 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 9406 9693 . + . ID=g7797.t1.exon16;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 9406 9693 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 9976 10089 . + . ID=g7797.t1.exon17;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 9976 10089 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . exon 10383 10610 . + . ID=g7797.t1.exon18;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . CDS 10383 10532 . + 0 ID=cds.g7797.t1;Parent=g7797.t1 NODE_218_length_30995_cov_42.4687 . three_prime_UTR 10533 10610 . + . ID=g7797.t1.utr3p1;Parent=g7797.t1 #PROT g7797.t1 g7797 MSNSTAVAMAALAAVQRLQAELDALRATAVGTAAGLDILHLLSMGIFVTMMQLGFTFFEAGCVRKKNLTNIAMKNLGDIGASVLGYFIVGWAFAFGGGGNGFSGNSYFLLQGMPAELYAKFFFQASFVITSTTIISGAISERTRYPMYLIYSFAMGAVIYPFTTHWVWSSHGFLRRMGVIGAVDFAGGGPVHLLGACVSFAGAKIIGPRLRGSRATLAHVSSLDSSTMTLNMFSDATEMMSRGADAGAPTVGVRQGSTPGTGSTTPNNGGAATPQHGLAESGGTAALNVPRERGAGSSMSTNGESAREFSRRMQEVEEHVRAEMMGMSPISGHKPFYIIIGTMLLMIGWFGFNCGSTGGLSGDLSLVSSRVGVVTMIAMSTGMMVGVFYSIYFGKVGQYDVLDTCVGALGGLVAITPGCAVTEPAVALVVGAIGSLAANFGPRLIVRMGVDDPVGAVALHGFAATWGLIACGLFAKREYAEQVYMNGASITHGYGLFYGGGGLLLGVQLLEIVVVAAWGLVLGSVVFLTLRHFRMRVSMRDEIIGLDVCEHNQAVHAEERSAEQSEAMRKERHQVVSQVARRIDLKTKERSVERSANLFSSNAFEIYSVVGEVGIGKTTHAKLLAERLGGTYLSIIDLLQRSAVNHSSQTRILELINSKKIIPPPLICINLLKTAIQGTGVSVGPAGTLLGGSSRVAPLSPLPATTETAGGASGDAPPVPLQYAFGGASESALSIAKGLKRIYVLDGFPRDIEEMLAMQNEFGSCIRIVWLEGREKIHATPATDTQFRSYLHRKGLLIKVDVDRSQPATTNGDAVALAVSKFRSSSNTLHTQASQSATSTRQLAPWEA* # ORIGINAL: g7804.t1 original gene structure, not modified by PASA NODE_218_length_30995_cov_42.4687 AUGUSTUS gene 29330 29848 . - . ID=g7804;Name=g7804.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS mRNA 29330 29848 . - . ID=g7804.t1;Parent=g7804;Name=g7804.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS exon 29330 29848 . - . ID=g7804.t1.exon1;Parent=g7804.t1 NODE_218_length_30995_cov_42.4687 AUGUSTUS CDS 29330 29848 . - 0 ID=cds.g7804.t1;Parent=g7804.t1 #PROT g7804.t1 g7804 MPVHGGVAGARQRQCVRLGHGGMAALWLSALVTLRGRRAQVPRVAAHIRSRRLESARHCKCNAGLAGIDGKPEDRKHSYVDFVESGVAVHYDYPGKCGMNALLNTNYTCLNPVDEWAAILSTSPARAMPLLSAANTNRRRRPVLLYGTLNVDVTAVRMLHNVTCIAPTLGSV* # ORIGINAL: g8489.t1 original gene structure, not modified by PASA NODE_906_length_15992_cov_48.1289 AUGUSTUS gene 10537 11172 . + . ID=g8489;Name=g8489.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS mRNA 10537 11172 . + . ID=g8489.t1;Parent=g8489;Name=g8489.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 10537 10642 . + . ID=g8489.t1.exon1;Parent=g8489.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 10537 10642 . + 0 ID=cds.g8489.t1;Parent=g8489.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 10811 11172 . + . ID=g8489.t1.exon2;Parent=g8489.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 10811 11172 . + 2 ID=cds.g8489.t1;Parent=g8489.t1 #PROT g8489.t1 g8489 MDQNQYPERTGAGRGPTKEQQNPEMMNKMGQGQMAGMMGQQPMGKMQECDTKAGMQAGMPMGGNMGGNMGGMNAPGMMQSHGGGGMGMGMGQSGQTMGAPGSMPGQTGQGMMPGGQMGQMGQMGQMGQMGQGQGQAGMNKAGGMPCQGSNMDKRA* # PASA_UPDATE: g8490.t1, single gene model update, valid-1, status:[pasa:asmbl_9939,status:12], valid-1 # PASA_UPDATE: g8490.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9938,status:12], valid-1 NODE_906_length_15992_cov_48.1289 . gene 11298 15877 . - . ID=g8490;Name=g8490.t1 NODE_906_length_15992_cov_48.1289 . mRNA 11685 15877 . - . ID=g8490.t1;Parent=g8490;Name=g8490.t1 NODE_906_length_15992_cov_48.1289 . five_prime_UTR 15675 15877 . - . ID=g8490.t1.utr5p1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 15533 15877 . - . ID=g8490.t1.exon1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 15533 15674 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 15295 15395 . - . ID=g8490.t1.exon2;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 15295 15395 . - 2 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 14964 15107 . - . ID=g8490.t1.exon3;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 14964 15107 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 14552 14739 . - . ID=g8490.t1.exon4;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 14552 14739 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 14289 14345 . - . ID=g8490.t1.exon5;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 14289 14345 . - 1 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 13970 14141 . - . ID=g8490.t1.exon6;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 13970 14141 . - 1 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 13644 13815 . - . ID=g8490.t1.exon7;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 13644 13815 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 13338 13492 . - . ID=g8490.t1.exon8;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 13338 13492 . - 2 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 13001 13115 . - . ID=g8490.t1.exon9;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 13001 13115 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 12688 12857 . - . ID=g8490.t1.exon10;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 12688 12857 . - 2 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 12324 12500 . - . ID=g8490.t1.exon11;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 12324 12500 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . exon 11685 12186 . - . ID=g8490.t1.exon12;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . CDS 12052 12186 . - 0 ID=cds.g8490.t1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . three_prime_UTR 11685 12051 . - . ID=g8490.t1.utr3p1;Parent=g8490.t1 NODE_906_length_15992_cov_48.1289 . mRNA 11298 15877 . - . ID=g8490.t1.1.5b6be70c;Parent=g8490;Name=g8490.t1 NODE_906_length_15992_cov_48.1289 . five_prime_UTR 15675 15877 . - . ID=g8490.t1.1.5b6be70c.utr5p1;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 15533 15877 . - . ID=g8490.t1.1.5b6be70c.exon1;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 15533 15674 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 15295 15395 . - . ID=g8490.t1.1.5b6be70c.exon2;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 15295 15395 . - 2 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 14964 15107 . - . ID=g8490.t1.1.5b6be70c.exon3;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 14964 15107 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 14552 14739 . - . ID=g8490.t1.1.5b6be70c.exon4;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 14552 14739 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 14289 14345 . - . ID=g8490.t1.1.5b6be70c.exon5;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 14289 14345 . - 1 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 13970 14141 . - . ID=g8490.t1.1.5b6be70c.exon6;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 13970 14141 . - 1 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 13644 13815 . - . ID=g8490.t1.1.5b6be70c.exon7;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 13644 13815 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 13338 13492 . - . ID=g8490.t1.1.5b6be70c.exon8;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 13338 13492 . - 2 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 13001 13115 . - . ID=g8490.t1.1.5b6be70c.exon9;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 13001 13115 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 12688 12857 . - . ID=g8490.t1.1.5b6be70c.exon10;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 12688 12857 . - 2 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 12324 12500 . - . ID=g8490.t1.1.5b6be70c.exon11;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 12324 12500 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 12039 12186 . - . ID=g8490.t1.1.5b6be70c.exon12;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . CDS 12052 12186 . - 0 ID=cds.g8490.t1.1.5b6be70c;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . exon 11298 11555 . - . ID=g8490.t1.1.5b6be70c.exon13;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . three_prime_UTR 12039 12051 . - . ID=g8490.t1.1.5b6be70c.utr3p1;Parent=g8490.t1.1.5b6be70c NODE_906_length_15992_cov_48.1289 . three_prime_UTR 11298 11555 . - . ID=g8490.t1.1.5b6be70c.utr3p2;Parent=g8490.t1.1.5b6be70c #PROT g8490.t1 g8490 MVETATPGFPGTPNGKLTNKVVNKSISNSLLSYQSVESGLDKVDYEADICTNLEDHGLRAHSIVHNGTPSFLYEEALRNEKGTNITASGALATRSGAKTGRSPADKRITVEPTSASDVWWGPVNIKLDQASFMINRERAVDFLNTRERLYVFDGFAGWDPRYRIKIRVVCARAYHALFMHNMLIRPTVEELKHFGEPDYTIYNAGEFPANRYTKGMTSATSVALDFGRREMVILGTQYAGEMKKGVFTIMHYLMPKAGVLSLHSSANEGPNGDVTLFFGLSGTGKTTLSADPKRNLIGDDEHCWSDDGVFNIEGGCYAKAIDLSKEKEPEIYNAIRFGTVVENVVYDQYTREIDFKDTSITENTRAAYPIEYIPNAKIPCLGGHPSNIVLLTCDAFGVLPPVSRLNAEQTMYHFISGYTAKVAGTEEGVTEPTATFSACFGQPFLVWHPTKYATMLAEKMKKHGVHCWLINTGWSGGKYGVGSRIKLAYSRAIIDAIHNGELAKASFVNYDVFNIEIPTACPGVPSEILNPANTWENKTEFKATQDKLATLFNDNFAKYSERATPEVIAAGPKKP* #PROT g8490.t1.1.5b6be70c g8490 MVETATPGFPGTPNGKLTNKVVNKSISNSLLSYQSVESGLDKVDYEADICTNLEDHGLRAHSIVHNGTPSFLYEEALRNEKGTNITASGALATRSGAKTGRSPADKRITVEPTSASDVWWGPVNIKLDQASFMINRERAVDFLNTRERLYVFDGFAGWDPRYRIKIRVVCARAYHALFMHNMLIRPTVEELKHFGEPDYTIYNAGEFPANRYTKGMTSATSVALDFGRREMVILGTQYAGEMKKGVFTIMHYLMPKAGVLSLHSSANEGPNGDVTLFFGLSGTGKTTLSADPKRNLIGDDEHCWSDDGVFNIEGGCYAKAIDLSKEKEPEIYNAIRFGTVVENVVYDQYTREIDFKDTSITENTRAAYPIEYIPNAKIPCLGGHPSNIVLLTCDAFGVLPPVSRLNAEQTMYHFISGYTAKVAGTEEGVTEPTATFSACFGQPFLVWHPTKYATMLAEKMKKHGVHCWLINTGWSGGKYGVGSRIKLAYSRAIIDAIHNGELAKASFVNYDVFNIEIPTACPGVPSEILNPANTWENKTEFKATQDKLATLFNDNFAKYSERATPEVIAAGPKKP* # ORIGINAL: g8488.t1 original gene structure, not modified by PASA NODE_906_length_15992_cov_48.1289 AUGUSTUS gene 2204 8332 . + . ID=g8488;Name=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS mRNA 2204 8332 . + . ID=g8488.t1;Parent=g8488;Name=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 2204 2407 . + . ID=g8488.t1.exon1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 2204 2407 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 2714 3342 . + . ID=g8488.t1.exon2;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 2714 3342 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 3746 4147 . + . ID=g8488.t1.exon3;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 3746 4147 . + 1 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 4522 4720 . + . ID=g8488.t1.exon4;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 4522 4720 . + 1 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 4880 5015 . + . ID=g8488.t1.exon5;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 4880 5015 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 5297 5415 . + . ID=g8488.t1.exon6;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 5297 5415 . + 2 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 5830 6017 . + . ID=g8488.t1.exon7;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 5830 6017 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 6367 6469 . + . ID=g8488.t1.exon8;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 6367 6469 . + 1 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 6836 6909 . + . ID=g8488.t1.exon9;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 6836 6909 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 7101 7212 . + . ID=g8488.t1.exon10;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 7101 7212 . + 1 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 7386 7475 . + . ID=g8488.t1.exon11;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 7386 7475 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 7832 8108 . + . ID=g8488.t1.exon12;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 7832 8108 . + 0 ID=cds.g8488.t1;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 8244 8332 . + . ID=g8488.t1.exon13;Parent=g8488.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 8244 8332 . + 2 ID=cds.g8488.t1;Parent=g8488.t1 #PROT g8488.t1 g8488 MSSGAEGGRSPSRAVGLDSPTSNGPHSSSTPTKREALSVQNSEDADDAADTSPRPSICGDDSIENGAGLGLGNFNHIWFEKDANNMALCTLCCRVMGFGKKKALKCASCKLLVHARCKDEADQAPEFRCKPMYAHIVPADAAIPQAQQAHTHTHTQQTSHAKGVASPKVSGSRGQGSSSAGPSTTTADRTSSPQARTSSPSASRRAAADGDAVGSASTSNTTDSTMKHLHHWVYGNYSKRKCAWCQRSCGSLSISVGKITSVRCAWCKLTGHRSCIEDHALDSACDLGRHKYVLLAPAQVSIRTERLHSEESSDLLRVTSSGSAASSTTSTASNSTSVVNASGIAVPAASLSLSASGSSGAAGPQHHGRHQSASKQVSIVEPKGEVSAGSDNAASSASGGSLLAPEHAEAGRRSSRSKSQKRSMARKSKRRKSRQMRRLIITERPASCPLLVFINPKSGGKQGVKLLHEFQSLLNPLQVVDLTRGGPLPGLMLFSSLKNFRVLVCGGDGTAGWVLSSLDKLGLDPRPPIGILPLGTGNDLARALRWGGGYSEEKIPPILDQMEVAEVVHFDRWNLHVTPFEVANDGGPSGAAAQPPLDVINNYFSVGADANTALAFHQAREKNPDRFKSRIGNKMYYGVVGGMDILKHSMKDLYKSVTLTCDDQDYTSLILKEKLEGIVFLNIPSYAGGTNPWGNRDGDNFFAQALDDGFIEVLGITSSFDLAMQQARMGSGFRICQCKRAVLTTAKALPVQVDGEPCLLAPSVIDISFRNQGVLLRRAKGHSIPNGGSLRGRTPSDPAAGLDNRSTSNPQLSVASGMPLAVQELQREGGGHSAPGSPKKTASRTQSADCVRESDKDRKDRDEAHSRQRNSAA* # ORIGINAL: g8487.t1 original gene structure, not modified by PASA NODE_906_length_15992_cov_48.1289 AUGUSTUS gene 349 946 . - . ID=g8487;Name=g8487.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS mRNA 349 946 . - . ID=g8487.t1;Parent=g8487;Name=g8487.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 875 946 . - . ID=g8487.t1.exon1;Parent=g8487.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 875 946 . - 0 ID=cds.g8487.t1;Parent=g8487.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS exon 349 760 . - . ID=g8487.t1.exon2;Parent=g8487.t1 NODE_906_length_15992_cov_48.1289 AUGUSTUS CDS 349 760 . - 0 ID=cds.g8487.t1;Parent=g8487.t1 #PROT g8487.t1 g8487 MLRCVRSQASLSRVAFVFASESLMPARTVATPSGGRGGNQSRGSGNQSRGGGQSRGGSRSGDGGSDFGGRGGRGGRGGRGGRGGRGRGGRGGRGGGLTRSDFRMFDEALPSKEAVEAAALALPAPVETASELTALVSRAEKEWPRVEPKGSIDDAIALGKD # ORIGINAL: g9048.t1 original gene structure, not modified by PASA NODE_4451_length_1600_cov_31.1613 AUGUSTUS gene 220 1407 . + . ID=g9048;Name=g9048.t1 NODE_4451_length_1600_cov_31.1613 AUGUSTUS mRNA 220 1407 . + . ID=g9048.t1;Parent=g9048;Name=g9048.t1 NODE_4451_length_1600_cov_31.1613 AUGUSTUS exon 220 1407 . + . ID=g9048.t1.exon1;Parent=g9048.t1 NODE_4451_length_1600_cov_31.1613 AUGUSTUS CDS 220 1407 . + 0 ID=cds.g9048.t1;Parent=g9048.t1 #PROT g9048.t1 g9048 VRTSTWIDPRNRPWKVTSEYIDAGGVYDGYEVVFPPMDDPIEASGVAMALGDSGLVGEGSKSATHIHVNATCLLSADSNTALAGAIANTLLMHEDSEPLLRRIFRTRHLGGSNNPFSRALYDTHPALIDRINRMDDHSPASVAAAFNDFLDAEKRLLGVDGDEQGRDAGVRASRVWKYHSINFANVLAINPSSPPQTGTVEFRAFDLLDPPRFSLAVRLCTALVSRAAEMAAKGDRYRILGKIPSVPLGGESSVDLLPSNPAEVRTRAENLLRFLGIELDDFAILLDDIHADQKDRRAAAEEPAGGYGYYGYALPAKARGYIVTCASSPCLNGGTCIEEDKGYTCVCTPDYIGVDCEICIGDGSASSSDDPVTASPTDAPIESIYIGTESSSAWEL # ORIGINAL: g1686.t1 original gene structure, not modified by PASA NODE_532_length_21660_cov_40.4018 AUGUSTUS gene 18909 19739 . - . ID=g1686;Name=g1686.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS mRNA 18909 19739 . - . ID=g1686.t1;Parent=g1686;Name=g1686.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 18909 19739 . - . ID=g1686.t1.exon1;Parent=g1686.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 18909 19739 . - 0 ID=cds.g1686.t1;Parent=g1686.t1 #PROT g1686.t1 g1686 MALPPIEIMSPRVPELEVTSSLVLPTAEPTINYGKATSRRGSNSPSPTVDASPRLGAGASPTQRAPPKMKRRVSLSNEVTFLGATYQPGLGSDGAIPTLYGAVDSVNGSCRGELSTLSVEPTVKKGKGQRPSACSNTSIRGTLAPPTRLRSASESRICSAASRARRWTIGIEEGLKTPPALQATTLGASSQSVCASSQSVSSSSSTSSCLSLVTSESIKSLTTSAPSRRRKSCAGELLYKCDKLRNSERNMFGLMDEIGNILSKMNTDDPWGPRFD* # ORIGINAL: g1685.t1 original gene structure, not modified by PASA NODE_532_length_21660_cov_40.4018 AUGUSTUS gene 7486 16816 . - . ID=g1685;Name=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS mRNA 7486 16816 . - . ID=g1685.t1;Parent=g1685;Name=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 16774 16816 . - . ID=g1685.t1.exon1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 16774 16816 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 16178 16378 . - . ID=g1685.t1.exon2;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 16178 16378 . - 2 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 15905 16007 . - . ID=g1685.t1.exon3;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 15905 16007 . - 2 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 15435 15672 . - . ID=g1685.t1.exon4;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 15435 15672 . - 1 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 14992 15054 . - . ID=g1685.t1.exon5;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 14992 15054 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 14527 14642 . - . ID=g1685.t1.exon6;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 14527 14642 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 14128 14333 . - . ID=g1685.t1.exon7;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 14128 14333 . - 1 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 13333 13916 . - . ID=g1685.t1.exon8;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 13333 13916 . - 2 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 12188 13028 . - . ID=g1685.t1.exon9;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 12188 13028 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 11783 11994 . - . ID=g1685.t1.exon10;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 11783 11994 . - 2 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 9396 11574 . - . ID=g1685.t1.exon11;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 9396 11574 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 8369 8900 . - . ID=g1685.t1.exon12;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 8369 8900 . - 2 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 7985 8156 . - . ID=g1685.t1.exon13;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 7985 8156 . - 1 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 7729 7796 . - . ID=g1685.t1.exon14;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 7729 7796 . - 0 ID=cds.g1685.t1;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 7486 7525 . - . ID=g1685.t1.exon15;Parent=g1685.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 7486 7525 . - 1 ID=cds.g1685.t1;Parent=g1685.t1 #PROT g1685.t1 g1685 MGTGFDSGMDPQNLGIIPRAANRIFENVRRDREKAREDGIPPPEVTVSVSFLELYNEDIIDLLALSTPGGADARPKSAQSLGKGRGGITIREDQTEGIVLVGSTAQTVSSHDNMLECLQRGSLSRTTASTSMNAVSSRSHAIFTVHIMQRRYVRPQDGGDVDGSSEGQPKPQSVDAQWENLMAKFHFVDLAGSERLKRTNATGHRAKEGISINVGLLALGNVISALGDQSKKSSHVPYRDSKLTRLLQDSLGGNSKTLMVACVSPSDCDFMETLNTLKYANRARNIKNRVVVNQDSHAMEVAALRKQIQQLRLELIETKTGVKATDLSLGADGSLGDLVNENKMLQAENERLKRLCDSLKSDRVAADERTARAIAERDVAKSVVESLGGGNVVAGDGAPLQPDWSRAIAELSSKLEHAEGELAVARAAMAQAPRTPTGRAEKGGGGSGHVTQRDMSSPAASSSLVTPTKARGAVAPARQSSAPKGSRGVADAQHSQSAAPSALAALRRESVERGPIEKPVHVRIRLLIAEEQAEIRHEAKFNRSLRAAYRKAAARIRESTHVETPPKQTTPAKGKPTVALKDSEASAKAASETPGKVKRKAATPQQPQPRVRVGSVAGRTSAANDEPVAVSDSEVTARNARGSVSGASLSGHLTPPVTVQVGKVTGQAAGGAPVVAGDIADVASPFSLAPIGASAVALVATSMEDLVYSDTDDAEDALVIDDEDGGLSTDIANLSDEIMQKEELVRQLEMSRARMEGMRRDYERKMTELRDTIRATEVERDAAMHADDNEPSVAVPTGQTSSSARGASAASDRLNKSEAYSRKLAALTEQLASLQKGAKDHARLLRLKAASERTITDLRREVTEMKKQKVALVQRMREESRRLKGETSERAREIKQLQKESRRYASRIKILEAEKSKQEMMLRRRLEEVAAAQKKVREQFAPQVRRRGSQPPPMGRPVQLQPAPTVTATLAVAPLPPQAPPSLRQFRRARLHTVSGSESVSIVRTRHDSDGDGLVSGTAGSESESGHVQGDDQRSEVRGGATPATHAPQQQQGPQQGATATLTPGSSAALKGGASPEPARRRSSAAVGAVSQQQQQQQQGGHSPLSQRRSAQLASLSLRRKKALLEAELARAALRRELQMQMDKLLKTREALAREHESLVAKLRESGETLSRQEDHSDRAELQEDAEDLEAEIEYTNQTIEELQRDIVQAEAGTEEALPGGASALVRSCSVAEARHLLEHLFAIIVEMETAHRVRSGRVRELEWRLRQTETSLAVLMGGSDDVGGAPAPDGAVSHSANTNAVGSTSGIDATPSDGKYARRRSTRRSIVPRVAWDSTPSHGGAAFAAADGGGSSSAQGQGQAPDPFGTERGPPLLMDEDGVVIDVATHTPNNSGGVVSSSDHVTPTHGGPFALSQNGGLVSPYVQQFASDSLFDRRERARSLDQAYSGPLLPHPNLASSSGGSAIPSSTAAMRRATTTQSPAGLAAAASAASSAAAAAATLQSASLQLQGMLDPQYAASPSAAKADVFSRLSTTGTVSSSSAMPNGGAGVPPPRAQVVQSSKSDDKAISCTHTMYGHTGSVLAVASKDSLVYSASQDGTVKVWDVRAGIELRTLGGHPYHVLALAVTDSLLFAASQNCVKVWDLTSYQCIKTLSLPDTVHALKVDALSSRLFCAADKSVRSFDLRSFQPARALVGHKATVFALAIADAPSSSPQKGSSPGNAQVLITGSRDHSIRIFDLAGGEMRQSLHPPHYDGVQALALCGRWLFSGSRDHSIKRWSATDWSPEVALNAAHNDWVTALETVPGTGQLLSSGRDGCIKLWDPEACTVVAEVAAHQQGINGLATGSGLVYSASADRTVKVWKLPVS* # PASA_UPDATE: g1687.t1, single gene model update, valid-1, status:[pasa:asmbl_8006,status:12], valid-1 NODE_532_length_21660_cov_40.4018 . gene 20779 21220 . - . ID=g1687;Name=g1687.t1 NODE_532_length_21660_cov_40.4018 . mRNA 20779 21220 . - . ID=g1687.t1;Parent=g1687;Name=g1687.t1 NODE_532_length_21660_cov_40.4018 . exon 20779 21220 . - . ID=g1687.t1.exon1;Parent=g1687.t1 NODE_532_length_21660_cov_40.4018 . CDS 21002 21220 . - 0 ID=cds.g1687.t1;Parent=g1687.t1;5_prime_partial=true NODE_532_length_21660_cov_40.4018 . three_prime_UTR 20779 21001 . - . ID=g1687.t1.utr3p1;Parent=g1687.t1 #PROT g1687.t1 g1687 QVPEGWLTDLNDKSMVTISNALVDDTVAGAKVGDSFQFERVGYFCVDPDSDVKAGRLVFNRIVELKEDAGKA* # PASA_UPDATE: g1683.t1, single gene model update, valid-1, status:[pasa:asmbl_8007,status:3], valid-1 NODE_532_length_21660_cov_40.4018 . gene 878 4005 . - . ID=g1683;Name=g1683.t1 NODE_532_length_21660_cov_40.4018 . mRNA 878 4005 . - . ID=g1683.t1;Parent=g1683;Name=g1683.t1 NODE_532_length_21660_cov_40.4018 . five_prime_UTR 3888 4005 . - . ID=g1683.t1.utr5p1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 3831 4005 . - . ID=g1683.t1.exon1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 3831 3887 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 3503 3577 . - . ID=g1683.t1.exon2;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 3503 3577 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 2946 3249 . - . ID=g1683.t1.exon3;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 2946 3249 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 2579 2670 . - . ID=g1683.t1.exon4;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 2579 2670 . - 2 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 2099 2347 . - . ID=g1683.t1.exon5;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 2099 2347 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 1824 1933 . - . ID=g1683.t1.exon6;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 1824 1933 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 1419 1557 . - . ID=g1683.t1.exon7;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 1419 1557 . - 1 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . exon 878 1196 . - . ID=g1683.t1.exon8;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . CDS 1032 1196 . - 0 ID=cds.g1683.t1;Parent=g1683.t1 NODE_532_length_21660_cov_40.4018 . three_prime_UTR 878 1031 . - . ID=g1683.t1.utr3p1;Parent=g1683.t1 #PROT g1683.t1 g1683 MLPSTRMMGASARAAVRTQIPVASVLVRSITTKDTPGAKKFDFPVPFKTHKLAEGPNNFGYATRDELLDYYRTMTVIRRMETSAGDLYKAKLIRGFCHLYSGQEGVCTGIEAAITKKDSIVTAYRAHGYTYVRGVSVKEILCELTGRRDGCAKGKGGSMHMYGPQFYGGNGIVGAQVPLGAGLALYHQYQQTGGVAIALYGDGAANQGQIFEAFNMASLWKLPCIFACENNQYGMGTAINRSSASTDYYSRGDFIPGIKINGMDILAVREAVAFAADHCRSGKGPMVLEFLTYRYSGHSMSDPGTSYRSREEVQKMRAQNDPITGLKERLLSAGFATVEELKDIETKVREEVDEAVEFSKTSPEPEDAEVYTNIYHGHPPASVRGSDPWTVAHPSS* # PASA_UPDATE: g1684.t1, single gene model update, valid-1, status:[pasa:asmbl_8005,status:12], valid-1 NODE_532_length_21660_cov_40.4018 . gene 4755 6432 . + . ID=g1684;Name=g1684.t1 NODE_532_length_21660_cov_40.4018 . mRNA 4755 6432 . + . ID=g1684.t1;Parent=g1684;Name=g1684.t1 NODE_532_length_21660_cov_40.4018 . exon 4755 5145 . + . ID=g1684.t1.exon1;Parent=g1684.t1 NODE_532_length_21660_cov_40.4018 . CDS 4755 5145 . + 0 ID=cds.g1684.t1;Parent=g1684.t1 NODE_532_length_21660_cov_40.4018 . exon 6036 6432 . + . ID=g1684.t1.exon2;Parent=g1684.t1 NODE_532_length_21660_cov_40.4018 . CDS 6036 6364 . + 2 ID=cds.g1684.t1;Parent=g1684.t1 NODE_532_length_21660_cov_40.4018 . three_prime_UTR 6365 6432 . + . ID=g1684.t1.utr3p1;Parent=g1684.t1 #PROT g1684.t1 g1684 MTAATKAAYTGLVLATVAAFQVFLLGSGWILGAQDGIQRSMRTTCNVFPFPLNHVMGMFDVFFGESGVVDGAVGKALFNHAVAFVGPILIFSIVETSGAGLAFASLYPAAEQFASFAMTTPIMFSRYDSAARSSFSGHVLLAALYLAAGAYGHYAVARFGSPLLSLFQMLDGSVLKNSPLAFLVTDVAVTLVATTIFLCTHAGVVVTAALLAASVYTGSFAPLAIGFAIRSFSQPKKSD* # ORIGINAL: g1682.t1 original gene structure, not modified by PASA NODE_532_length_21660_cov_40.4018 AUGUSTUS gene 236 334 . - . ID=g1682;Name=g1682.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS mRNA 236 334 . - . ID=g1682.t1;Parent=g1682;Name=g1682.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS exon 236 334 . - . ID=g1682.t1.exon1;Parent=g1682.t1 NODE_532_length_21660_cov_40.4018 AUGUSTUS CDS 236 334 . - 0 ID=cds.g1682.t1;Parent=g1682.t1 #PROT g1682.t1 g1682 MGVHGLTSYLAAKDGARRVDDLKDAYEKEQHQR # ORIGINAL: g10098.t1 original gene structure, not modified by PASA NODE_898_length_16057_cov_39.81 AUGUSTUS gene 2362 5967 . + . ID=g10098;Name=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS mRNA 2362 5967 . + . ID=g10098.t1;Parent=g10098;Name=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 2362 2470 . + . ID=g10098.t1.exon1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 2362 2470 . + 0 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 2986 3435 . + . ID=g10098.t1.exon2;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 2986 3435 . + 2 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 3601 3764 . + . ID=g10098.t1.exon3;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 3601 3764 . + 2 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 4225 4468 . + . ID=g10098.t1.exon4;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 4225 4468 . + 0 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 4736 4875 . + . ID=g10098.t1.exon5;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 4736 4875 . + 2 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 5089 5224 . + . ID=g10098.t1.exon6;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 5089 5224 . + 0 ID=cds.g10098.t1;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 5534 5967 . + . ID=g10098.t1.exon7;Parent=g10098.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 5534 5967 . + 2 ID=cds.g10098.t1;Parent=g10098.t1 #PROT g10098.t1 g10098 MKVRVRFRGQTRVVELSEATTSALSSRVGAAFFGTEDSPATAFRFSLNNATPIAIIGTPAATGTEQLRELGILPGDLIYLLDDGLIPWSAGSSTSHAHAHAHADTRGINVTTANTATAASRTSSIGASPREISHVNVDRDVAVPMDTGDGAAPRNSKSDLASSVVSALQGISASAVSDALAGGASTATTNTAAALSLGDRLVRSRVTSLKQKMEPRSVVESACVVVHAVLLESGFTSDSGNVEDDLDSQPGWLATRDAGVYRFSYIPRGIPWDARVKCSVSVVAMDYNMVVTARLTGGGDAALISASFSSVDLVRGDVAIDAAADKVYKQLPTFTRSLRDKITQRLLSAARMSIGLSGIGIVALSPEIKLGILSYLDYKSLASACQASCDLKSLGYDNSLWKRLFLARFGPPSEGEAVTDWRSAYRRRHLEERHKRETQAQMTRFLRDAHDQRAHIPQGAYPMHYPPIPAGGPFGTIGGDYDRFPGGMPVAPGFPLPGGMGFAPPPMGPRFDPFGPTPDFDPLGMPRRPSRGGGIPDPRFGRNPRGGFGGGFGGGSFI* # ORIGINAL: g10097.t1 original gene structure, not modified by PASA NODE_898_length_16057_cov_39.81 AUGUSTUS gene 1285 1512 . + . ID=g10097;Name=g10097.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS mRNA 1285 1512 . + . ID=g10097.t1;Parent=g10097;Name=g10097.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 1285 1512 . + . ID=g10097.t1.exon1;Parent=g10097.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 1285 1512 . + 0 ID=cds.g10097.t1;Parent=g10097.t1 #PROT g10097.t1 g10097 MQHQRHLLEMQALKATDGHVVAQQQQHLPPPATPTTPATHVTHVTQGQSVTLKLKAPTTDAPPKIRLTLKGSSQQ* # PASA_UPDATE: g10100.t1, single gene model update, valid-1, status:[pasa:asmbl_9879,status:12], valid-1 NODE_898_length_16057_cov_39.81 . gene 9376 12646 . - . ID=g10100;Name=g10100.t1 NODE_898_length_16057_cov_39.81 . mRNA 9376 12646 . - . ID=g10100.t1;Parent=g10100;Name=g10100.t1 NODE_898_length_16057_cov_39.81 . exon 9376 12646 . - . ID=g10100.t1.exon1;Parent=g10100.t1 NODE_898_length_16057_cov_39.81 . CDS 10118 12646 . - 0 ID=cds.g10100.t1;Parent=g10100.t1 NODE_898_length_16057_cov_39.81 . three_prime_UTR 9376 10117 . - . ID=g10100.t1.utr3p1;Parent=g10100.t1 #PROT g10100.t1 g10100 MSIWSLCRSQLRGNSFARALISLTLIPIGCLVLITIASLQMNGTWEPSPASAGNGVNNGGNAVGGGSRPNRMGNGAGRQDQQRSSEDSWVGRPLQPNIPHPLQRGFDHTDEQPWLSLDDTLDDLRGYAGSGNKALAGRRICFVTAGLAGPILYGGIGQAVLRQALLYADNGADVDIAYAGAFQAGDPAFWASHFAPMGLHFHFVPKNDVRYLYGTLHMKRAYDVWRWLQEKDGSNPYDLIVFHDLRGLGIYVMYAKASGLAFARTAMMVHAHGSARLSDYFNARLPGDGDAGLVLYAMERVSVELADFVLSPSEFYYSWMRSNGYQLSSSLSPQRSKLWTISLLVPSDESGTFDNQRRYGQKVLSTKFGFFGRIDRLKGVITLLDALDHLVESRDAILPTEILFAGDPANIRVDGKPINSMAYITQRQQAANWPFNIRFVSNFTSNQVANLFVKENYIFVNPTNGETASTVTVELLSAGVAMITTNVCAIPELFGDHDMFEQWQFERGDSIALSDLMRKAMRVGVPVNRPRVSARKAEDLYVAAAVGSILLSRANEKAAEQLEVPLSLTIGVATRDRADLLAELMQSLVAQSVFPKDTEIVVLDVGSQNASSVADVVGKYEPALRTRGVRVVFRRRDTRAHVSVARNIIMEVASGSHILLIDDDDIALPRMVELLCATARRTQADVVSGFAQNFEDLDGQRIVRRISLSSGASHESMAFVHHAGKSNMLVRKSAMVAVGGCSVDLNSSPTPFVDWDLYVKLAAAGATMAVVPEPTFMYRMSSRQSIYYGAVGRDDLMFYAHAKRAAGLCSVYNIPSHVCTGLAISLQLLSRPGGISPLPVGH* # PASA_UPDATE: g10101.t1, single gene model update, valid-1, status:[pasa:asmbl_9880,status:12], valid-1 NODE_898_length_16057_cov_39.81 . gene 14128 15782 . + . ID=g10101;Name=g10101.t1 NODE_898_length_16057_cov_39.81 . mRNA 14128 15782 . + . ID=g10101.t1;Parent=g10101;Name=g10101.t1 NODE_898_length_16057_cov_39.81 . five_prime_UTR 14128 14495 . + . ID=g10101.t1.utr5p1;Parent=g10101.t1 NODE_898_length_16057_cov_39.81 . exon 14128 15782 . + . ID=g10101.t1.exon1;Parent=g10101.t1 NODE_898_length_16057_cov_39.81 . CDS 14496 15782 . + 0 ID=cds.g10101.t1;Parent=g10101.t1 #PROT g10101.t1 g10101 MHLTVALPRSVEPVLSLAPLDIRDAVSSLSSITHSPSLTGMVASSATGGSPVAAKISPPHSQTPQQQQQPQQQQQQPQQQQRQQQQQQQQHGSSAEIATPMTSPFARTSSAERALNQNGRLSTSDSPSNRRKDTLSVSLSAGSLHNGSSPNVTSPGALNAPQSPAANRRVSFECYQHGRGSTHMLFAHTMGKSNSRENLFAALDPNFVGRAAAAAVAEMNGDDDGTEDGAGNTAETRRNGPAGTWASRINVLNAARSVHPLDRLNDDSHVYDTLPDHSLWPAMPPRHWRRGVRRNGPRDLRHFSSIMYGHATDRLRPSSPALDKTDEELKRDLRDRVADVDALLSSPVSDDWGFNMLLLRDLTLNRPLFHCGVHLVDQHGLFTSLRIDFGKLVRCLCALEAGYRSNPYHNSTHAADVAQTMHWFIVKR* # ORIGINAL: g10099.t1 original gene structure, not modified by PASA NODE_898_length_16057_cov_39.81 AUGUSTUS gene 7156 8768 . - . ID=g10099;Name=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS mRNA 7156 8768 . - . ID=g10099.t1;Parent=g10099;Name=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 8571 8768 . - . ID=g10099.t1.exon1;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 8571 8768 . - 0 ID=cds.g10099.t1;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 8166 8249 . - . ID=g10099.t1.exon2;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 8166 8249 . - 0 ID=cds.g10099.t1;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 7654 7848 . - . ID=g10099.t1.exon3;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 7654 7848 . - 0 ID=cds.g10099.t1;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 7156 7236 . - . ID=g10099.t1.exon4;Parent=g10099.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 7156 7236 . - 0 ID=cds.g10099.t1;Parent=g10099.t1 #PROT g10099.t1 g10099 MSVFGYPRLRLMPAIIGPEPPVASLKPKANTTPAVAPSVPLDAYMKLGMCLDDAWLHEQETKQAEREEAIIMKAGANLIPMGTFNTGTERATTEGGSFHRRTAPGRHAAPNAPAYAGDMDGDDDEGDDNDGDSDANDAPEEVDGVDLLDVEGPLDFGSPGFLAAEQSIEAWAATSPSADMIARHS* # ORIGINAL: g10096.t1 original gene structure, not modified by PASA NODE_898_length_16057_cov_39.81 AUGUSTUS gene 558 1247 . + . ID=g10096;Name=g10096.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS mRNA 558 1247 . + . ID=g10096.t1;Parent=g10096;Name=g10096.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 558 623 . + . ID=g10096.t1.exon1;Parent=g10096.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 558 623 . + 0 ID=cds.g10096.t1;Parent=g10096.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS exon 954 1247 . + . ID=g10096.t1.exon2;Parent=g10096.t1 NODE_898_length_16057_cov_39.81 AUGUSTUS CDS 954 1247 . + 0 ID=cds.g10096.t1;Parent=g10096.t1 #PROT g10096.t1 g10096 MLIEKSNSLKTKLRDIELRTALHLQAPEEALLIGRLLVEDEKEEISRLTQPPPPPPLSSIDALSMHINGVGMLEPGALDTFFEAALLEGLDPSGTGHVGGIPLDFAGFDVHGGGDLFWG* # PASA_UPDATE: g12216.t1, single gene model update, valid-1, status:[pasa:asmbl_820,status:3], valid-1 NODE_1210_length_12986_cov_40.4862 . gene 7644 9096 . - . ID=g12216;Name=g12216.t1 NODE_1210_length_12986_cov_40.4862 . mRNA 7644 9096 . - . ID=g12216.t1;Parent=g12216;Name=g12216.t1 NODE_1210_length_12986_cov_40.4862 . five_prime_UTR 8976 9096 . - . ID=g12216.t1.utr5p1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . exon 8826 9096 . - . ID=g12216.t1.exon1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . CDS 8826 8975 . - 0 ID=cds.g12216.t1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . exon 8612 8645 . - . ID=g12216.t1.exon2;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . CDS 8612 8645 . - 0 ID=cds.g12216.t1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . exon 8419 8508 . - . ID=g12216.t1.exon3;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . CDS 8419 8508 . - 2 ID=cds.g12216.t1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . exon 8164 8262 . - . ID=g12216.t1.exon4;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . CDS 8164 8262 . - 2 ID=cds.g12216.t1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . exon 7644 7905 . - . ID=g12216.t1.exon5;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . CDS 7751 7905 . - 2 ID=cds.g12216.t1;Parent=g12216.t1 NODE_1210_length_12986_cov_40.4862 . three_prime_UTR 7644 7750 . - . ID=g12216.t1.utr3p1;Parent=g12216.t1 #PROT g12216.t1 g12216 MAEVHIIGELVGASGFPSTNLYCKWGIVTGAAWRCLEGQVAGQTQVDTPRDAICAKWSHPIDVHFATKGIQGWPKLHFQVWHLDGYGRSELYGYGFCHVPTSPGFHEVDCVTWRPAGNLMEQISAFFLGGGLQLKSPDLVYNGADRYRLRTVAMGNVHLQLSVILRNFEKFGVEF* # ORIGINAL: g12213.t1 original gene structure, not modified by PASA NODE_1210_length_12986_cov_40.4862 AUGUSTUS gene 145 815 . + . ID=g12213;Name=g12213.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS mRNA 145 815 . + . ID=g12213.t1;Parent=g12213;Name=g12213.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 145 291 . + . ID=g12213.t1.exon1;Parent=g12213.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 145 291 . + 1 ID=cds.g12213.t1;Parent=g12213.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 530 815 . + . ID=g12213.t1.exon2;Parent=g12213.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 530 815 . + 1 ID=cds.g12213.t1;Parent=g12213.t1 #PROT g12213.t1 g12213 CRVLVSSEPGETEANRPKTFVDAQLLSGSQLMAEDFLQNFSVNIIVSHADTLAENVEFEIVGTAPTATAEAAAAEESKAAEAVAPMEVDAPAAKDRKRKRDDEDDGVVVLDDSARPTTENAAVKRPRQDATPATATDSDIIEL* # PASA_UPDATE: g12214.t1, single gene model update, valid-1, status:[pasa:asmbl_819,status:3], valid-1 NODE_1210_length_12986_cov_40.4862 . gene 1158 4275 . - . ID=g12214;Name=g12214.t1 NODE_1210_length_12986_cov_40.4862 . mRNA 1158 4275 . - . ID=g12214.t1;Parent=g12214;Name=g12214.t1 NODE_1210_length_12986_cov_40.4862 . five_prime_UTR 4155 4275 . - . ID=g12214.t1.utr5p1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . exon 4141 4275 . - . ID=g12214.t1.exon1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . CDS 4141 4154 . - 0 ID=cds.g12214.t1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . exon 3656 3737 . - . ID=g12214.t1.exon2;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . CDS 3656 3737 . - 1 ID=cds.g12214.t1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . exon 2461 3237 . - . ID=g12214.t1.exon3;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . CDS 2461 3237 . - 0 ID=cds.g12214.t1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . exon 1956 2179 . - . ID=g12214.t1.exon4;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . CDS 1956 2179 . - 0 ID=cds.g12214.t1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . exon 1158 1803 . - . ID=g12214.t1.exon5;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . CDS 1659 1803 . - 1 ID=cds.g12214.t1;Parent=g12214.t1 NODE_1210_length_12986_cov_40.4862 . three_prime_UTR 1158 1658 . - . ID=g12214.t1.utr3p1;Parent=g12214.t1 #PROT g12214.t1 g12214 MADHNENWGNHNEAPKETSGGPPGMDPEGEIESNWDQVVDNFDDMKLREDLLRGIYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFSIAILQQIDISVRECQALILAPTRELAQQIQKVVIALGDFMSAQCHACIGGTNVRDDMRKLEAGTHIVVGTPGRVYDMINRRAFRTDNIKMFVLDEADEMLSRGFKDQIYDVFRLLPPNIQVILLSATMPADVLEVTKRFMRDPIRILVKREELTLEGIKQFFIAVDREEWKLDTLCDLYETLTITQAVIFCNTRRKVDWLTEKMHSRDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVSTDDVRALREIEAFYNTQIDEMPMNVADLI* # ORIGINAL: g12217.t1 original gene structure, not modified by PASA NODE_1210_length_12986_cov_40.4862 AUGUSTUS gene 9575 12833 . + . ID=g12217;Name=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS mRNA 9575 12833 . + . ID=g12217.t1;Parent=g12217;Name=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 9575 10658 . + . ID=g12217.t1.exon1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 9575 10658 . + 0 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 10754 10828 . + . ID=g12217.t1.exon2;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 10754 10828 . + 2 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 10964 11006 . + . ID=g12217.t1.exon3;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 10964 11006 . + 2 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 11102 11291 . + . ID=g12217.t1.exon4;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 11102 11291 . + 1 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 11434 11613 . + . ID=g12217.t1.exon5;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 11434 11613 . + 0 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 11755 11809 . + . ID=g12217.t1.exon6;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 11755 11809 . + 0 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 11905 12011 . + . ID=g12217.t1.exon7;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 11905 12011 . + 2 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 12149 12221 . + . ID=g12217.t1.exon8;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 12149 12221 . + 0 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 12337 12518 . + . ID=g12217.t1.exon9;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 12337 12518 . + 2 ID=cds.g12217.t1;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS exon 12714 12833 . + . ID=g12217.t1.exon10;Parent=g12217.t1 NODE_1210_length_12986_cov_40.4862 AUGUSTUS CDS 12714 12833 . + 0 ID=cds.g12217.t1;Parent=g12217.t1 #PROT g12217.t1 g12217 MRRSAAPSQRLASFQPPSKIARVGDGAPSSFAATRVSANARTDAAASSETNDENQPSKETATADGNCSSDTLTVDKECPLTTMTNDVVKSSSQGTAPFKKPGGFSTPFRVPLASSGATGPMSATTVGVPAKTSLSAPKSVAKVAPRAAASSTTPSLAQSLAARSLGMGTGVAGDEEGTKPRYFAALWCKASKKKHKKWEGDAIVVIKSRTILLQDAEGKDLGTSTSYSKGELANVSIGESFFVGGREIEITGTIKDEDYTSGKCFLVSSASVAATPVHLSMPKTGAAAKGLSRKSGDSAQHSAPEAPVSAAPRHDPHAENAVVLPRPSLAMQREGNRDGQAGCIDVVIDPFLQKKLRPHQIAGVTFLYECVMGMRNYQGSGAILADEMGLGKTLQCITLIWTLLKQSPFRGRQIARRVLVVCPSSLVGNWQKEFKKFLGDERLKTFSISNERRPAEFANSPIYPVMIISYEMLRQSIAEIVDLNFDLVVCDEGHRLKNEGAKITQALMSLPCRRRVILTGTPIQNDLQEFFTLVDFCNPGLLGTLAAFRRVYEAPIVTSRDPNASADEKALGSSRAEELHRVTNMFCLRRLGEINNKYLPPKTEYVVLCRPSALQLDIYKHLLGSRLLRSCFDSSTKHSQHLVCITALKKICNSPALIKAAAVDQEDAEQDVSIFADTLGLLPDDLALDKFQPEYSGKYIVW* # PASA_UPDATE: g12215.t1, single gene model update, valid-1, status:[pasa:asmbl_818,status:3], valid-1 NODE_1210_length_12986_cov_40.4862 . gene 6071 7474 . + . ID=g12215;Name=g12215.t1 NODE_1210_length_12986_cov_40.4862 . mRNA 6071 7474 . + . ID=g12215.t1;Parent=g12215;Name=g12215.t1 NODE_1210_length_12986_cov_40.4862 . five_prime_UTR 6071 6111 . + . ID=g12215.t1.utr5p1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . exon 6071 6210 . + . ID=g12215.t1.exon1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . CDS 6112 6210 . + 0 ID=cds.g12215.t1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . exon 6459 6559 . + . ID=g12215.t1.exon2;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . CDS 6459 6559 . + 0 ID=cds.g12215.t1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . exon 6890 6986 . + . ID=g12215.t1.exon3;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . CDS 6890 6986 . + 1 ID=cds.g12215.t1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . exon 7190 7474 . + . ID=g12215.t1.exon4;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . CDS 7190 7318 . + 0 ID=cds.g12215.t1;Parent=g12215.t1 NODE_1210_length_12986_cov_40.4862 . three_prime_UTR 7319 7474 . + . ID=g12215.t1.utr3p1;Parent=g12215.t1 #PROT g12215.t1 g12215 MTIYNFYLFDRKGTCLHYAEWTRNRHASMSQDEEFKLMYGMLYSVKSFVTRISPKPVKDGLYYYKTSAYKLNFYETASGLKFVLNTDPNVGDIRDVLQQIHSQIYVETLVKNPVYKLGDPIDSELFKSKLNAFVTALPYFT* # ORIGINAL: g2541.t1 original gene structure, not modified by PASA NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS gene 164 414 . - . ID=g2541;Name=g2541.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS mRNA 164 414 . - . ID=g2541.t1;Parent=g2541;Name=g2541.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS exon 164 414 . - . ID=g2541.t1.exon1;Parent=g2541.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS CDS 164 414 . - 0 ID=cds.g2541.t1;Parent=g2541.t1 #PROT g2541.t1 g2541 MVTVEDLERDLAELRSQYKDLKKRLEKLEKPRTDADEADDTDKDKPKKKRTFYLNSAGHLAFAINPYNMYQPLARTAAPPRHM # ORIGINAL: g2542.t1 original gene structure, not modified by PASA NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS gene 480 7137 . + . ID=g2542;Name=g2542.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS mRNA 480 7137 . + . ID=g2542.t1;Parent=g2542;Name=g2542.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS exon 480 5617 . + . ID=g2542.t1.exon1;Parent=g2542.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS CDS 480 5617 . + 0 ID=cds.g2542.t1;Parent=g2542.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS exon 6342 7137 . + . ID=g2542.t1.exon2;Parent=g2542.t1 NODE_1426_length_11409_cov_39.9101_potentialcontaminant AUGUSTUS CDS 6342 7137 . + 1 ID=cds.g2542.t1;Parent=g2542.t1 #PROT g2542.t1 g2542 MNRPGKLLFRFYNSERKLKYALYVFVGPVSDPVKSALKGIAHLNVADACKLLRSKPKWQRAIHEAYGPTWYVHFYPRQHIKANKIALDVPPKQRAPTTQSATRTRHQIGGAAKGGADTDNDSASPDSPDSPDAPDAPADLDEEDSEREEFWNLEDINEVDSLEQTASGEKPISIGSDWTAVDSSTSFPAHMESSMEDDRLENVFDKHYVYGQYMFDDDTIITTKSKVTAAVLNSETVGAGESLSIIPSRQYLWCVHHRTDKPVTIGHRYVAELGRDFDFPPVPEPYDRRRADYENFRLAFSLIQYQDDNGNILMDYVGATGDIEIYMVDAYHEFARLNSSVWIGDALADFRATFLRMYFPSLYSRQEEIAGVLAMTGTDRASTSSQALAQEKKRIADTKVKIENDLTLENEVMFVVERMKSPPQPDDSLPEFEDASILQILTTVSIENRPIDFYRVFDDFEVNDTFPFLLYNVKPQHPGAFKVSRKFFEQSESADKVMSWIKSPPTALIVKMINADKKLLTIVFFENKRIECKIQWKEEDSLKVGEINSCMNDVRSLLRRINSQLAKYETKQYVPFTIPSDDDFRFALISSVERIKMKTINFALLTQFARKMLFPYVSIVIPKAGSAKRPDTTTATFKYRRISKYDSKAQIDNRIAYLIRNTSLTQSHIVADIVEHFGLPEKVADTYIQNVLAKNPALRAILAQPIRTYLTSGGRLKQPGVNIDLAGSQGNYKFRVTNAKSLEQLQKIREFVHAMIVLYVRIVVEKSADPQFASIKRVLTSVGVIAERRHMIEEIKVDPAVAKSMKAIASLDPSRLNFSDKESNAASIHWSRICQQSGTDGRRRPNVVRAENVQELLQQGYQFDKKRNGYFKTVRVGKTASGGAPTTIELQAVLMDSPEGGVFYTCDPEENGDHMYIGFLRKKLNPLTKQCIPCCFKKNQISSTDGKAHVAACVNGPCADGAAAVELNQLSTAHAEILYILQDNPVIQPGRLHFLPTDVDQLVNKSTGRTIEMNSHYLHRTRGYFFKYGVNGGGFLHAVAHCFGITELELYAKIQQRLLDDVDDVLFTSLNAGGLRLRFETRQKLLSYLDQHHAKLGHEFFTDILSCGGLVHPQGMQTLLLSRNAEAGYNILVLNPGNPPGRENQPHVLIIRQNGRYDPVSLVAKRDAVALEYRMLFDPADVSRVLEFYFANSNSVLMKSLRVYEGKFVARLLMAELEGLGGVGGVDASYRPVGQVLDAHYQCVYLVGKNGMIFPVNPSGSVPDLKVLSSVSPKLDATETVKHAAILAHKYGIPLHFSMAVCGAEKKQTTVVGLVVANTGSPGLVVPVKPKRYEVRANGTVEVAKGERLKVTKDDNNMLMDRVNTAIMKGYDPAMVDERVLAVRRTKFREEGYQLFRLEFSEWLKDHPATRTKIITLLNSNSLSGVMPIVQDVAKHLVKPTAKLDNATYAAYEVANRRTSCRRLHAHVDAVGECAQCCEGKLVVSKDDIQTYASRLYAELVAHPLKQMEILQEGEYRISEVVSYGLYSQRGADEIVSYISPTYNHKFNIFDLSETRKKHEEETNASLNATHKMVVTRKEMQQDIIHHSDTLIRAFANGFYWQNAIVPDAKLRNLGYVSTTQTHMKNYMKSVAMEWLGDNLAVIVKENKALFQGMAPATYLQTLAESSNTFSMGGPELFALSRAFQKNVRVVDQQGETVYSFDDFEDGRPIVISLIILPCLETFLGRDSGCLRSALFAARTLFAARNLSAECNLFAECTLFAARNLFAECTLFAARNLSAECTLFAACTLFAARNLSAARNLSAECTLFAACTLFAARTLFAARNLSAECTLFAECTLFAECTLFAECTLFAECTLFAECTLFAECTLFAARTLFAARTLFAARTLFAARTLSAECTLFAACNLSAVRTLFAARNLSAECTLFAECTLFALFAECTLSAECILFAARNLSAECILFAAQSVCGVHTVCGVVKSKCPFC* # ORIGINAL: g8725.t1 original gene structure, not modified by PASA NODE_3296_length_3803_cov_35.0314 AUGUSTUS gene 259 3286 . - . ID=g8725;Name=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS mRNA 259 3286 . - . ID=g8725.t1;Parent=g8725;Name=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 3173 3286 . - . ID=g8725.t1.exon1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 3173 3286 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 2781 2851 . - . ID=g8725.t1.exon2;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 2781 2851 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 2317 2425 . - . ID=g8725.t1.exon3;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 2317 2425 . - 1 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 1901 2035 . - . ID=g8725.t1.exon4;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 1901 2035 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 1536 1674 . - . ID=g8725.t1.exon5;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 1536 1674 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 1186 1313 . - . ID=g8725.t1.exon6;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 1186 1313 . - 2 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 745 852 . - . ID=g8725.t1.exon7;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 745 852 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS exon 259 405 . - . ID=g8725.t1.exon8;Parent=g8725.t1 NODE_3296_length_3803_cov_35.0314 AUGUSTUS CDS 259 405 . - 0 ID=cds.g8725.t1;Parent=g8725.t1 #PROT g8725.t1 g8725 MTIVLINAVSVDAQMVKPNDDSGEKYGALGKGPKTVMSLALATWKDLVYNHVRDKLLYHVIREVTRDRDGSAGVNRRVLQECIQSYIDLNSDSKRPLEMYYDDLEAPFLSATAEYYRREAAVLSGNCDVSKYMRQVEIRLGEEEIRVARLLPSQSHQKVIMIFLAEMVTGQKQRLTSDCEAFIAQEMLEDLSRMYGLLRRVVNGIDQMLETFQKHATAAGVSALRSLGDGMSDPKQYVETLLSVHQKYHGLVKSAFASDANFIAALDKACRNIINDSAHIKAAVSPPELLARYCDLLLKKSNRAQSDAELEEQLSHV # ORIGINAL: g1110.t1 original gene structure, not modified by PASA NODE_897_length_16087_cov_39.8497 AUGUSTUS gene 6040 7544 . + . ID=g1110;Name=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS mRNA 6040 7544 . + . ID=g1110.t1;Parent=g1110;Name=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 6040 6191 . + . ID=g1110.t1.exon1;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 6040 6191 . + 0 ID=cds.g1110.t1;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 6502 6591 . + . ID=g1110.t1.exon2;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 6502 6591 . + 1 ID=cds.g1110.t1;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 6789 6903 . + . ID=g1110.t1.exon3;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 6789 6903 . + 1 ID=cds.g1110.t1;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 7248 7544 . + . ID=g1110.t1.exon4;Parent=g1110.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 7248 7544 . + 0 ID=cds.g1110.t1;Parent=g1110.t1 #PROT g1110.t1 g1110 MSPSAKDVPIDISSLEKELERAMDFDERRKRENDAKKRAVTQRVATYDDFKGIVAAAHISPLSKEEIVAKPKQATWNSAARSTADKSANDSAGSTPSAGGLSVVEFERDWRRLKLPAEKYEYVTAMPHDVLARAFKEVGGYLGSLVGVLASEFKDTDADTCLAVLEAASHTQRFSLAAGFLSRKEKESASALFTRIVEVNTARTEDVARLRKLYGVE* # ORIGINAL: g1109.t1 original gene structure, not modified by PASA NODE_897_length_16087_cov_39.8497 AUGUSTUS gene 3176 5451 . + . ID=g1109;Name=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS mRNA 3176 5451 . + . ID=g1109.t1;Parent=g1109;Name=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 3176 3193 . + . ID=g1109.t1.exon1;Parent=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 3176 3193 . + 0 ID=cds.g1109.t1;Parent=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 3294 4792 . + . ID=g1109.t1.exon2;Parent=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 3294 4792 . + 0 ID=cds.g1109.t1;Parent=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 5037 5451 . + . ID=g1109.t1.exon3;Parent=g1109.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 5037 5451 . + 1 ID=cds.g1109.t1;Parent=g1109.t1 #PROT g1109.t1 g1109 MVETRKRTRLDSTSSVHSNDGESEAVRHGAPPEIGANRKRARTTSQSSTSGDATSGVTATTAATEDVPASAPSETMLGKEKEREKRVTFSADKNAPRFVKSKRQLEREARARGESSVSLSTGDASAADSQGAHDSSQTRSQTVNDSTRFESYGGDDDDNDANVDEDGFRRPTLPVIRISSTGTASAVNTAPPAIVSKSIAIRPPVDPRYADPRDDEESSRHGQVEANTAPVVSHASSTQVTTRRGSASAQPPDVAGGTVTLTTAAAQQLQKQHALAAQRQRRRTLSTGSMSGDAAGALVAANARRKTPRKITSVDASSLTMRDLVRYNPKTNPMKSTVDRREKQKQQRIADRSMPGTPTNSQAVPASPAGTPQRPLATPITLPGGGGGGSAASAPAGDRALADGEEGPKGSLGERQPVLAPQVKIVNGQIVINEESLEIAVGQADADDREPESVVYETTSHVSYASYTNRAPSERWTAEDTRRFYLGLSQCGTDFALIGKLFPNRTRRQIKNKFKREEKDNRALVDAALTKRMPVDFTMFNDPSLSQLSSRMNSRINSPASAHRTPANADATPATDESEGGSASAHNTQDSNAINDRGELDGADDADDDLPEMLVGGASSAVGLGVRGVPDVSRALLPRLEET* # PASA_UPDATE: g1111.t1, single gene model update, valid-1, status:[pasa:asmbl_9875,status:12],[pasa:asmbl_9876,status:12],[pasa:asmbl_9877,status:12], valid-1 NODE_897_length_16087_cov_39.8497 . gene 7878 10098 . - . ID=g1111;Name=g1111.t1 NODE_897_length_16087_cov_39.8497 . mRNA 7878 10098 . - . ID=g1111.t1;Parent=g1111;Name=g1111.t1 NODE_897_length_16087_cov_39.8497 . exon 9827 10098 . - . ID=g1111.t1.exon1;Parent=g1111.t1 NODE_897_length_16087_cov_39.8497 . CDS 9827 10098 . - 0 ID=cds.g1111.t1;Parent=g1111.t1 NODE_897_length_16087_cov_39.8497 . exon 7878 9624 . - . ID=g1111.t1.exon2;Parent=g1111.t1 NODE_897_length_16087_cov_39.8497 . CDS 8115 9624 . - 1 ID=cds.g1111.t1;Parent=g1111.t1 NODE_897_length_16087_cov_39.8497 . three_prime_UTR 7878 8114 . - . ID=g1111.t1.utr3p1;Parent=g1111.t1 #PROT g1111.t1 g1111 MARALFFLAIALCVGIAIANEPLVNTRVERTIDLKSHLARITAKVTIQNNGAASIASVHVGLESALASKVAFVSVKEQAKKLNVGPAQLKSGAAVYRVDLAKPLGPGDSVTLTVKYVVPKTQQPFPAEITQSDKQLVRYFGSAYYYSPYPTKSQSTKYELASSRVESFTRVAPSSASGSTVSYGPYENIAASSESEVVIHFENNSPFLTVRRMTRDIELSHWGNVAIEESFELEHTGARLKGSFSRYDYQRGSDSGVSSIREFTQRLPRSAADVYYRDLIGNISTSHFRTETETSIFEIRPRFPLFGGWKVDFYTGYNLPSNEYLFREGSEFVLRIPFVGHVFDNAHVEQLTVRFVLPEGVNNVRVVTPYAVDGEWREQFATYLDVAGRTVVVVTKTNLVDEHAEEAEVHYEFSQLLMLQEPLLVVGFFYALFLAVIGYVRLDFSIGKVSDRAAGDANLKAATVAEQLYDLQETRAEAYGAFDAAISSARRSKNRAAIAAAKKTLDVTLKEAETKHSALVSSLEAVSKDAAERARDVLRKERERQSQWAEFGSKAERGELSEDKWAKAEDTFRANIARLESDIDNAVNTLTGQ* # ORIGINAL: g1112.t1 original gene structure, not modified by PASA NODE_897_length_16087_cov_39.8497 AUGUSTUS gene 10995 14970 . + . ID=g1112;Name=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS mRNA 10995 14970 . + . ID=g1112.t1;Parent=g1112;Name=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 10995 11135 . + . ID=g1112.t1.exon1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 10995 11135 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 11394 11480 . + . ID=g1112.t1.exon2;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 11394 11480 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 11693 11825 . + . ID=g1112.t1.exon3;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 11693 11825 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 12019 12152 . + . ID=g1112.t1.exon4;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 12019 12152 . + 2 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 12541 12648 . + . ID=g1112.t1.exon5;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 12541 12648 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 13132 13291 . + . ID=g1112.t1.exon6;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 13132 13291 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 13695 13840 . + . ID=g1112.t1.exon7;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 13695 13840 . + 2 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 14141 14247 . + . ID=g1112.t1.exon8;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 14141 14247 . + 0 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 14469 14663 . + . ID=g1112.t1.exon9;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 14469 14663 . + 1 ID=cds.g1112.t1;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS exon 14811 14970 . + . ID=g1112.t1.exon10;Parent=g1112.t1 NODE_897_length_16087_cov_39.8497 AUGUSTUS CDS 14811 14970 . + 1 ID=cds.g1112.t1;Parent=g1112.t1 #PROT g1112.t1 g1112 MKIEEVKSTTKTARVAAHSHVKGLGLNDEGNAEPIAAGLVGQEQGREAAGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGPKVPFCPMVGSEVYSTEVKKTAVLMENFRRAIGLRIKETKEVYEGEVTELTPEETENPMGGYGKTISHVVIGLRTTKGTKQLKLDPTIYDSLQKEKVQVGDVIYIEANSGAVKRQGRSDAYATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDMANARPQGGQDIMSMMGAIMKPKKTEITDKLRKEINKVVNKYIDQGVAELVPGVLFIDEVHMLDIECFTYLHRALESVLAPIVIFATNRGNCTIRGTQDIVSPHGIPLDLLDRLLIVRTLPYSHDEMVQILRIRAQTEGLVVDEDALLLLGEVGVKTTLRYAVQLLTPGNLLAKINGRGNVTRDDVEEIGELFYDAKSSAKMLAEHASKFLH* # PASA_UPDATE: g1108.t1, single gene model update, valid-1, status:[pasa:asmbl_9874,status:12], valid-1 NODE_897_length_16087_cov_39.8497 . gene 99 2588 . - . ID=g1108;Name=g1108.t1 NODE_897_length_16087_cov_39.8497 . mRNA 99 2588 . - . ID=g1108.t1;Parent=g1108;Name=g1108.t1 NODE_897_length_16087_cov_39.8497 . five_prime_UTR 2266 2588 . - . ID=g1108.t1.utr5p1;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . exon 1504 2588 . - . ID=g1108.t1.exon1;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . CDS 1504 2265 . - 0 ID=cds.g1108.t1;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . exon 1010 1112 . - . ID=g1108.t1.exon2;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . CDS 1010 1112 . - 0 ID=cds.g1108.t1;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . exon 667 812 . - . ID=g1108.t1.exon3;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . CDS 667 812 . - 2 ID=cds.g1108.t1;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . exon 99 305 . - . ID=g1108.t1.exon4;Parent=g1108.t1 NODE_897_length_16087_cov_39.8497 . CDS 99 305 . - 0 ID=cds.g1108.t1;Parent=g1108.t1;3_prime_partial=true #PROT g1108.t1 g1108 MDSIPTAEEPRGPSSADGVHKGTQSERCEREGYAHEVPAEWPVASSGDSRHRHLAGPRTQNASEQIVDDSGRPEPPGVLSQSVGGHVAAQAAHLVHTLSLDDSFIVCSAASEIHSAQQQKGVHNGEVAHNAKNEADGGHHVLRSVFMPWRSPHTPSMQHRASAPASVVDYSTDRDSDSDSHYNDKIDSDNGAAKHASLHLPKEPPAGVSLPDPSGGHECGLDNETMFVQVRRPETAEYDDTSLCVRVLTYNVNWGLCRMGMGTPRDHRIVKAIHDSGADIVCLQETQVGWQTFMQARLSSLYPYMTWHHHNIPDAKVNSIDGSHAGGLAILSRYPMKVIWCLQAPVVGSFFPSLLVEIDFGASCVIQLLNVHLRPPLSDGHKPSLRALFSTSGIRKAELQYYCERI # PASA_UPDATE: g5127.t1, single gene model update, valid-1, status:[pasa:asmbl_3861,status:12],[pasa:asmbl_3863,status:12], valid-1 NODE_2240_length_7104_cov_53.2114 . gene 35 3423 . + . ID=g5127;Name=g5127.t1 NODE_2240_length_7104_cov_53.2114 . mRNA 35 3423 . + . ID=g5127.t1;Parent=g5127;Name=g5127.t1 NODE_2240_length_7104_cov_53.2114 . five_prime_UTR 35 192 . + . ID=g5127.t1.utr5p1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 35 654 . + . ID=g5127.t1.exon1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 193 654 . + 0 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 1057 1527 . + . ID=g5127.t1.exon2;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 1057 1527 . + 0 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 1869 1979 . + . ID=g5127.t1.exon3;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 1869 1979 . + 0 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 2205 2294 . + . ID=g5127.t1.exon4;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 2205 2294 . + 0 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 2427 2584 . + . ID=g5127.t1.exon5;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 2427 2584 . + 0 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . exon 2882 3423 . + . ID=g5127.t1.exon6;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . CDS 2882 3302 . + 1 ID=cds.g5127.t1;Parent=g5127.t1 NODE_2240_length_7104_cov_53.2114 . three_prime_UTR 3303 3423 . + . ID=g5127.t1.utr3p1;Parent=g5127.t1 #PROT g5127.t1 g5127 MRRSTSAAPVARPFARDSRTVAWETDAPRASVYLASSTADDVEHTRSSSPRVSMKQTPVHRQSQQRRSFVPTNGTAESIPPARFSRFDAPMDALQFNPGWLERRLVLFAQKYGFNVPRHVFRALIQGLLCESAHVLVEVGNARVGMDVAKVLQTAVSSIMGLSCSEFICNGSTTAADLFASMVVRSPVYRTSQTSNVFRGSDPFGLNTAPRLRLRKTESVKIKYVSEFRKGNDPGFSRRSMRRSTSFETLAMPHVTLRRANSMGNISHDVMDMRAADSRTGVIDSRFMIADVCVIDRLSKAPANVGLELAEALVREELPFNGGLCRIPRSFIVVLIVGEDHDSLPQVLLDRIVSSVRASTSIARPPVFMSIEPVLPSDVLQCAREAALNMHASLPVERYARDIVVAVRNHRTIAGGVAARLSGLHVMAMAKIITLLHGESFVSPRHVASAAETVLSHRVVLKPWVAEAVAQAMQAKGAGVGGGGGAAGGNSAGDAQKTPTRAKADSLQSSNTVPFIITSDSGTPHVMHAPGGGIAAGAQQAAAQHHHHIDSPIELARRIVRKIISTIPQP* # PASA_UPDATE: g5128.t1, single gene model update, valid-1, status:[pasa:asmbl_3866,status:12], valid-1 NODE_2240_length_7104_cov_53.2114 . gene 3513 4381 . - . ID=g5128;Name=g5128.t1 NODE_2240_length_7104_cov_53.2114 . mRNA 3513 4381 . - . ID=g5128.t1;Parent=g5128;Name=g5128.t1 NODE_2240_length_7104_cov_53.2114 . five_prime_UTR 4257 4381 . - . ID=g5128.t1.utr5p1;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . exon 4164 4381 . - . ID=g5128.t1.exon1;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . CDS 4164 4256 . - 0 ID=cds.g5128.t1;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . exon 3973 4015 . - . ID=g5128.t1.exon2;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . CDS 3973 4015 . - 0 ID=cds.g5128.t1;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . exon 3513 3848 . - . ID=g5128.t1.exon3;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . CDS 3751 3848 . - 2 ID=cds.g5128.t1;Parent=g5128.t1 NODE_2240_length_7104_cov_53.2114 . three_prime_UTR 3513 3750 . - . ID=g5128.t1.utr3p1;Parent=g5128.t1 #PROT g5128.t1 g5128 MADKQADGDAALDTKNAEDLALFVQTLLNDMQDKFKKMSDQITTKIDDMGGRISELEKAIGTIMTQAGVEEGEGKSK* # PASA_UPDATE: g5129.t1, single gene model update, valid-1, status:[pasa:asmbl_3865,status:12], valid-1 NODE_2240_length_7104_cov_53.2114 . gene 5108 6856 . + . ID=g5129;Name=g5129.t1 NODE_2240_length_7104_cov_53.2114 . mRNA 5108 6856 . + . ID=g5129.t1;Parent=g5129;Name=g5129.t1 NODE_2240_length_7104_cov_53.2114 . exon 5108 5583 . + . ID=g5129.t1.exon1;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . CDS 5108 5583 . + 0 ID=cds.g5129.t1;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . exon 5676 5758 . + . ID=g5129.t1.exon2;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . CDS 5676 5758 . + 1 ID=cds.g5129.t1;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . exon 5925 6057 . + . ID=g5129.t1.exon3;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . CDS 5925 6057 . + 2 ID=cds.g5129.t1;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . exon 6206 6404 . + . ID=g5129.t1.exon4;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . CDS 6206 6404 . + 1 ID=cds.g5129.t1;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . exon 6629 6856 . + . ID=g5129.t1.exon5;Parent=g5129.t1 NODE_2240_length_7104_cov_53.2114 . CDS 6629 6856 . + 0 ID=cds.g5129.t1;Parent=g5129.t1 #PROT g5129.t1 g5129 MELRQRNFAGAPSGTPQDEHVYILSGDGANASEELPTAVKNTPGAPRPLFDADDALFRGRGRILEALFRTPRNRRTFVALVFLVLGIATRFHRISDPHQVVFDEVHFGGFASKYIQRSYFFDVHPPLGKLLIALPAYLRGYDGSFTFKDIGLDYNKAHIDVPYIAMRSVPAMLNALVVPLAFLTMTEWGFSMSGSVVAGVLVLFENSFVTQSRFILLDSMLIFFVATSVYCWATFCNLRKRAFSRQWWMWLLLLGASLSCALSVKWVGLFVIALIGVHTLLDLWRLIGDQKLIILDLVAHFMARVACLIIVPIVGYIFFYYIHFSILTVSGPGNAFMSSDFVSGLQGVVRSNTSALTFGSQVRSNNNIINYY* # PASA_UPDATE: g3105.t1, single gene model update, valid-1, status:[pasa:asmbl_7471,status:12], valid-1 NODE_4608_length_1406_cov_76.1112_potentialcontaminant . gene 1 1360 . - . ID=g3105;Name=g3105.t1 NODE_4608_length_1406_cov_76.1112_potentialcontaminant . mRNA 1 1360 . - . ID=g3105.t1;Parent=g3105;Name=g3105.t1 NODE_4608_length_1406_cov_76.1112_potentialcontaminant . exon 1 1360 . - . ID=g3105.t1.exon1;Parent=g3105.t1 NODE_4608_length_1406_cov_76.1112_potentialcontaminant . CDS 1 1360 . - 0 ID=cds.g3105.t1;Parent=g3105.t1;3_prime_partial=true #PROT g3105.t1 g3105 MASVVSFSSLPLEIVVHHIAPFLGNVELSSLSKVNSSLHTHLRHVRLFHLWPMYNRKYIEDSQFRDKVRATIPVDRLVLVAFDGDLQDLSAFKGVHSALFPKEGRTGSTCSASDLSPLKGVHTVELSFRSNSPDFLAPLADAQAVCLRQLNGNARVPAFRKAKSVDIRNGWLDLNDLAGIPRVTLGGGYTEPGTRFQDVSPLRLARFVELRSQKELEDLSCLENAREVVIHDCPRIVTLPPATYLRAFTWHRSPLKAIPPELGKLRFLDLSSSRDLEDVSAGGNVHELILDHCFSLKDVSGLGSVHTLRISRIIAVLDVSALSRVHTIEFVDVDLVGVAKLAGVHYLSLSSVRFDVQEISQLGTVHTLSLPLVNIEDVSTLGGVHTLLFERNERIVDVSALGNCHRVELIGCPVSDVSMLGRVHTLNLESTNVSDVSMLGNVHTLNLRGCKKV # ORIGINAL: g8035.t1 original gene structure, not modified by PASA NODE_153_length_34522_cov_42.6777 AUGUSTUS gene 33167 34395 . + . ID=g8035;Name=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS mRNA 33167 34395 . + . ID=g8035.t1;Parent=g8035;Name=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 33167 33292 . + . ID=g8035.t1.exon1;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 33167 33292 . + 0 ID=cds.g8035.t1;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 33497 33564 . + . ID=g8035.t1.exon2;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 33497 33564 . + 0 ID=cds.g8035.t1;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 33691 33778 . + . ID=g8035.t1.exon3;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 33691 33778 . + 1 ID=cds.g8035.t1;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 34093 34269 . + . ID=g8035.t1.exon4;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 34093 34269 . + 0 ID=cds.g8035.t1;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 34390 34395 . + . ID=g8035.t1.exon5;Parent=g8035.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 34390 34395 . + 0 ID=cds.g8035.t1;Parent=g8035.t1 #PROT g8035.t1 g8035 MAPAPTQSSSSSYRNGGNAGSTRSSSELQKEPTILFNASKDELCTVSNGFKFLHRRLRTNWKITQNREEISYERLAEANVVVFGGPREKFTAAEFDSIKRYVENGGSLLLTLGEGGEGAFNTNINFLLEEYGIMVNSDAVVRTVFYKYFHPKEL* # ORIGINAL: g8029.t1 original gene structure, not modified by PASA NODE_153_length_34522_cov_42.6777 AUGUSTUS gene 1 7882 . - . ID=g8029;Name=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS mRNA 1 7882 . - . ID=g8029.t1;Parent=g8029;Name=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 4560 7882 . - . ID=g8029.t1.exon1;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 4560 7882 . - 0 ID=cds.g8029.t1;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 3923 4059 . - . ID=g8029.t1.exon2;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 3923 4059 . - 1 ID=cds.g8029.t1;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 2611 2829 . - . ID=g8029.t1.exon3;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 2611 2829 . - 2 ID=cds.g8029.t1;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 1756 2439 . - . ID=g8029.t1.exon4;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 1756 2439 . - 2 ID=cds.g8029.t1;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 1 1153 . - . ID=g8029.t1.exon5;Parent=g8029.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 1 1153 . - 2 ID=cds.g8029.t1;Parent=g8029.t1 #PROT g8029.t1 g8029 MTRPISIGLVALIAATVTIASTSTVAAPTSDPNYAEALQKSMLFYEAQRAGHKDATNRVHWRGDSVLTDGSDVGIDLSGGWFDAGDHVKFGVPMAYSATMLAWGGLSFRDGYIKSGQMPYLKANLRFVADYFLQAHSKGKFYLVGQVGSGNADHSVWMSPEVLFFSAAGNRPTEYITKDCPGTELAGETSAALAAISLLLREDDPRYADTLLQHAAELHEFADTYRGVYTLCIPGAAGFYTSFSGYQDELAWAGAWMYKATGSSDYLSKARTAYIQSTGGAGCGCAWGMSWDDVSYGAAILLFEQTGDSLYSNNIEKNLNYWMNSIQKTPGGLSFLNQWGSLRYATTTAMTALAYSRLIAATKPTLAAQYSSWAKGQVDYALGKNPAGRSYVVGFGNNSPQNPHHRGATGAWGNSIDCCPSGSNRHVLVGALVGGPKAADDFAYDDVRGDYVANEVATDYNAGISGALAALADVYGGTPLSNFPQTESFSPSDEFGVRIGVITEDATQFTEFRVIVRQTTAWPARRVQLAVRYYMDLSDVQAMGFAPNPLDAIAVTLNYADGNGKATLTTGRFPSQDKTLYYFEVSWPAEAAPWPGGRGNQGSEYEAQVRISLRNSRRSPLWNRKSDYSYGRMGTGAAPADTDLLPLYSGGVVVFGREPPASPVSSIVTQVESSTSASAASMATATKPSTSSAAPPGSSSKTAVVTPSPSVTVTSRPASVRQSGSATSSQRATASTTARPSASVSPAPTGTHITAQCIWDDRQQTQLISFTARITNTGSNQIALDTASVQYFFGGSAASSLYRVSVASARIIPAAGQQVPADIAQGDLIATVTSYASGSAKYVATVTFRSGFLAAGARIVLSVAITPVSSGASLDRSSEYSRIASAVDAYVTCPSIVVSVGNTIVWGNAPQSFTISSQSVASVVGGSSAAATTIATSTTPASAPSSIALLFEPQSAGINSITYRVTVTNTGTASFALGSLSATYYFEGTADATATPTDYMADAYSAGVVTSGPPYHRDVTPAATASVTQAPGSRKSGARLAATIEFSSTTTDLRIESGASVRVQVGIHAKSWAALNKASDYSAQSSTGSNDRILVVVAGAIVSGTAPHKKRPLGDTIIPAVSRRASVLLSLANTYQPAGAGRIFVPSGDGSRSMSEFLLVPTLKDEHVSASDSARPVGGRNIVPLPESVVPEITTPDNDNIDALKTIQTPPGPVETGLASAMEPTGAVLIAALPAALIATPGPATVDVLDQELDPQDREAPAGGGISTDTRRLLEQVLSNVQSNREPGPVDGDPAMVVQPSQAPTENATPLQLQLLKLQQQLSTQLRDILALLHRGGPQANTTPVPVAAIQPAPPVQVQEVPPGVPIAPPVVVQPAAAVPLATALTKDPAPGIAQSTLTTMPAWPWGPPSEEESGDAEPRLPSHTWEFVYNYTNSKPTAPIASTTASPNGTVTVAPASSGDGSCTTTRSSVVTMRDRAPFTDEEILALQIGDFDGQYTSQSHSFFDRSEDNIVVPSKSECYKFDQNGREWRADLETAMSKDSVIVILGGGGPLGQALARELRLRGHHVHLRMSKHDTDFQDSIVPNAVTKPLLEFDGMRIRVVFLFAWDTRQPSADMVAEAAKYFAGRQIPVVFPSTVQVSNTNSSFGVSKLEAERLVQTNAGIYANIVRLPDVFGVERWHVGESKQHFVGKILNKCIRGDLRVTASDFKTHTGGAFRQLLYADDVATTLVDTFAPSVDFNATELSGPVSVDGIPIVRTVMASATVATPSSGWAEIDSIADDINVAWGRFVDSMPESDRRTEAGAESEHGPQFVRRECVPASVIATLRAAAGRALNAS # ORIGINAL: g8033.t1 original gene structure, not modified by PASA NODE_153_length_34522_cov_42.6777 AUGUSTUS gene 26153 28339 . - . ID=g8033;Name=g8033.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS mRNA 26153 28339 . - . ID=g8033.t1;Parent=g8033;Name=g8033.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 26153 28339 . - . ID=g8033.t1.exon1;Parent=g8033.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 26153 28339 . - 0 ID=cds.g8033.t1;Parent=g8033.t1 #PROT g8033.t1 g8033 MTAATASPMGWAHLESPFHQGERFVQERVGVRDKVEAQGRKVVRDYMPEQHREFYGLLPFLVIGTIDADGCVWCSAVAGQPGFLTTPDPRTLRVNAQVLPGDPLSRTLRIGAEVGIVGVQLSTRRRNRVSGVVSAMDPFGFSVTVKQTVGNCPQYIQIRDYTTTTAAAENKDGIALTADSVNNNKTPRHVGDSLDDRARAIVSAADTLFIATAHTGKDDDDRLRTGADASHRGGRPGFVSISEDSKTLTIPDFVGNFMFNTLGNLVLTPRAGLLFVDFASRDVLYLTGDVEIIWDGDEVKAFVGAERLIRFTITTAVRVERSFPLQFSDPREFSPMLDRTGTWEAARDAMEANRARNDYRQMRVSRLTDESDSVRSIYLQPVDGKGVAMHTAGQFLPIRIHPPGADKPLLRTYTISDAPDGTHYRLSVKREGTASNFLHSLAVGDVIEAVNPRGDFTFDSSSQRPVVMVAGGIGVTPLVAMLNDLLVNNGRTRYPNKIYFVHGVRNGRDHPFRAHLAEKAGKHSNLTVHVCYSAPQPEDDAPERLYNTAGRVNKAVLQSILPLDGYDFYLCGPPSFMQTIYDTVRDMGVPDARIRFEAFGPASVRRRRDAATAAPARKSSKSAKSEEVVDVEEAVEVVFSKSKRTCMWRPSDGTLLEFAEAQGLEPAFSCRSGVCGTCTTTVLKGSVDYAEDPIAEIAGGEALICCSTPHPGPHIEGREDREGVTLDL* # PASA_UPDATE: g8032.t1, single gene model update, valid-1, status:[pasa:asmbl_1913,status:3], valid-1 NODE_153_length_34522_cov_42.6777 . gene 22538 25329 . + . ID=g8032;Name=g8032.t1 NODE_153_length_34522_cov_42.6777 . mRNA 22538 25329 . + . ID=g8032.t1;Parent=g8032;Name=g8032.t1 NODE_153_length_34522_cov_42.6777 . five_prime_UTR 22538 22655 . + . ID=g8032.t1.utr5p1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . exon 22538 22925 . + . ID=g8032.t1.exon1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . CDS 22656 22925 . + 0 ID=cds.g8032.t1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . exon 23202 23435 . + . ID=g8032.t1.exon2;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . CDS 23202 23435 . + 0 ID=cds.g8032.t1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . exon 23750 23924 . + . ID=g8032.t1.exon3;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . CDS 23750 23924 . + 0 ID=cds.g8032.t1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . exon 24223 24325 . + . ID=g8032.t1.exon4;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . CDS 24223 24325 . + 2 ID=cds.g8032.t1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . exon 24479 25329 . + . ID=g8032.t1.exon5;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . CDS 24479 24926 . + 1 ID=cds.g8032.t1;Parent=g8032.t1 NODE_153_length_34522_cov_42.6777 . three_prime_UTR 24927 25329 . + . ID=g8032.t1.utr3p1;Parent=g8032.t1 #PROT g8032.t1 g8032 MENVVVATPRASPSGAPFPSFIPIEEIDFDGMVCFDALRKTFGHTEILVWDVVIFGPNALFFIFLLLGVKVARMKLRSMTSLITSTFYMLIWLICLTSLSRTVMHIALPSQDTVDQLLWLLVRFLILMLEVCVLVFGLLFGNIVNTRRGKKITLAVTTLISLAYAVIQGVLEFETNWTLSHHHSHWDMYAHGGMIFLFVTSAIFTLVYLSIVIMPYTPLQHKWPLPVKRSFYAYAFFLCVVNLLQAIGSALVFYEYIAGLCLVDLTTLVYFCFFAPMVYFIFLRDFFALRLSDILFYNEMAVDNEHQSVNAGGYEHGYYGAAGMYDPFDHGSYPGTDDTIHSTGVISIGDGSEYSSSVGAHFSTSSLPHDHDPLLARHADGMSIDSSGVDRYGFNSGRVRLQGYGSMSS* # ORIGINAL: g8030.t1 original gene structure, not modified by PASA NODE_153_length_34522_cov_42.6777 AUGUSTUS gene 8879 16003 . - . ID=g8030;Name=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS mRNA 8879 16003 . - . ID=g8030.t1;Parent=g8030;Name=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 15899 16003 . - . ID=g8030.t1.exon1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 15899 16003 . - 0 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 15549 15709 . - . ID=g8030.t1.exon2;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 15549 15709 . - 0 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 14687 15269 . - . ID=g8030.t1.exon3;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 14687 15269 . - 1 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 13222 14394 . - . ID=g8030.t1.exon4;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 13222 14394 . - 0 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 11615 12960 . - . ID=g8030.t1.exon5;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 11615 12960 . - 0 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 10591 11355 . - . ID=g8030.t1.exon6;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 10591 11355 . - 1 ID=cds.g8030.t1;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS exon 8879 10415 . - . ID=g8030.t1.exon7;Parent=g8030.t1 NODE_153_length_34522_cov_42.6777 AUGUSTUS CDS 8879 10415 . - 1 ID=cds.g8030.t1;Parent=g8030.t1 #PROT g8030.t1 g8030 MGRINDLIAQLKAAEQSGDLSKEREVCQELGVIFQRKHQYGKAIEFYERHLVLLDAKDATAGAIYRNIGDCYQDMGKPREALRELRVFRDFAVAIGSKVEEQRALVSIGNVLLDLLSANLYDEDGDGRHAAGGVLSTGNKENVVPQDSGGNALQNNGKTKSDAREKKEKTMEAMFAAYTRAHQLAVELSSESAVSRSEAAEMLCGVHVNLGNAYDLRNNADRTEFHASESLRVARESGLKECELRALVLLGSTYASTGRTTEAVLVLKDGIRIAKSTQDKQAQADILNQLGIAHLRAGQHESAGKAFAHSHRLMAELGSDEGVARATENIKLTKRYVLNKKRAEEAEKSLQQATDALKSIDDGDDVVDLRGDGGEDALARARAVAQVAELLERAGDLRAGMDQGVAAASHYERLAQLIEREESAPKDRLGAIYFSLGMTCHEIGDIGRAVRAFASAANNYEDGGIDQVDAQWQHAVCLEKAMDSHVTAFDYRELASVFMRCANAASIANEPKWEYRARIKSAECLQLDGASIEAERESTRAQELFNIMGGDVEMDEPGYASDGDGGEGSDVDAHATGDADEDEEGTIEALEAVMMETATGRRSRRTGGSKKAVNRRNEKGETPLHIAAQNGNVAEADRLLTAGADIDAKDNAGWTPLHDACNHGEVEMVRLLIERGADMFAKGLDDETPLHDACRFCQEDVVSVLLEHNAPLDAKNRAGQTPMQVAESHAVVKMLCAKAGIPAPRKDEWEASRATAEGDDVDSTPKKRVSKRTLGSSDSRRDARGSRGSTHNNSVEDRRRSRAVFEGDFIEDDIGEAKLKRRRTTASSHRRPAQTAGGRSRAPAYAARPAGARAGAGQGGHLRREGGRLTQGADGGGGASGTVDGGRGESGGRMDWKSGASEHLSRDRIRPRANDSDEDDIPPLPPPLSPPGRMASMDWRAGGGGRRLSLARFDRASSVARTASTVSDGDSVAVDPKNNNGDDNGGGDYDYDYDYDAMSVERGDVAVAPLHRTSSQRSGASQALMPQTAHAAPAHAPPPPVVKRVEVLFGREKAKVSLPEDDDPGDTNNGNNRDGERRKRKAQHTIEDMFDVECSLMIPYESVLPATGHSPTCAWLFVEAVERFREAKGQDVVIREFRLDGVHIVNARDSLCALLKAEDRVVAVIDSVKWRPLHELYASLCHGNTGWTHNNQPGGSGVPQHQLVHRATVSQSSHAVIPIPAVMSALESLASPVSGASILSVCLDHAGICGVWNAHPVFHALRAATSLTSLSLRHNSIGDGEAAVLADGLLLHLPSLATLDLTGNCIGHVGLDRICKAFSREAARAVRVLRLSHNVAIGNDVTTAVGSVGGASSLPAESPAAKSIATLLEACLSLEELRLDGCGLSPSFFADASLQSALESRASSLKILYVGDNDVCGGSAGVATTPDGYAGINPDAVSGHGTGDGGLAFAAAFRRLSLCPRSCIMELNIASTSLTPAAVAGIAAVVTRQSTRDTSIAHPHADANADANADADGGDADADAVHTEASLWAAMTHRHRMSLSLADCAIIDADSCVSIATMIHAGALRTLDLYCAGVTPAGAAILARVLVSRNNNGAEVDNCAVDGRMYADGGIQRPCGCGLESVSLRGNPSLSDAGARVLARALLALPKIASIDFSACDLGVGVVVDIVKSAFARGSSLAAVSINVSENRVGAFDVTTDVVATASVDGGYAASATQFGGESETTDDICDMAMVRNTAGADNPFDDNTGDEEEAMFDFDGDFGGGGEQLRFHGNGDERSQRLLDPPLALRSSSKVGGAAKGRAHGDATAIASAFEEWMLCHGRQRSIRALDLGGHGFDSESARAILLGWETVCCPHTRAVYDGDADVLLLEAGVGCCVRTDNEMAPPSPSLL* # PASA_UPDATE: g8031.t1, single gene model update, valid-1, status:[pasa:asmbl_1912,status:12], valid-1 NODE_153_length_34522_cov_42.6777 . gene 16876 21922 . - . ID=g8031;Name=g8031.t1 NODE_153_length_34522_cov_42.6777 . mRNA 16876 21922 . - . ID=g8031.t1;Parent=g8031;Name=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 21779 21922 . - . ID=g8031.t1.exon1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 21779 21922 . - 0 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 21099 21543 . - . ID=g8031.t1.exon2;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 21099 21543 . - 0 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 20536 20928 . - . ID=g8031.t1.exon3;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 20536 20928 . - 2 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 18971 20427 . - . ID=g8031.t1.exon4;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 18971 20427 . - 2 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 18709 18783 . - . ID=g8031.t1.exon5;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 18709 18783 . - 0 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 18378 18512 . - . ID=g8031.t1.exon6;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 18378 18512 . - 0 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 18021 18208 . - . ID=g8031.t1.exon7;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 18021 18208 . - 0 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 17809 17880 . - . ID=g8031.t1.exon8;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 17809 17880 . - 1 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 17588 17707 . - . ID=g8031.t1.exon9;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 17588 17707 . - 1 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . exon 16876 17314 . - . ID=g8031.t1.exon10;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . CDS 16972 17314 . - 1 ID=cds.g8031.t1;Parent=g8031.t1 NODE_153_length_34522_cov_42.6777 . three_prime_UTR 16876 16971 . - . ID=g8031.t1.utr3p1;Parent=g8031.t1 #PROT g8031.t1 g8031 MLYTLCNEHWLGSNAHADTASQPREIEIAGFVDSLSVEMDSTFLPYRPGMSFTHEEELSELQSNLRRISEMASFRANISEFGKDISSATNSSATGDESSRRVRPTDAHLHTDGSSSRNFSSSVGLRTFADERPPLSMSASGVQSYSEMPPSGRFGAVSRDAGMLAPPLHGHSDAYMQGYDAESHSFSTAAGYTDDKAVIGALQALLAKVRQLQNEGQNANDSLRSAHNVIGRLEAETVRYRDLLDKTTPPHNMNGRPHTYQDGASPSPLRPDMPRVFASPGQNPDAQGHAYSSLHVTGVAAGPSHRGGVEGPDPASSMWHELVKKRDEIEGLFRRMDERLRDLSDDIPTMRSLVVTSRPSPSPSHAAASGRADAGQAAADTQSASPDRQIRKESAKVDAASGRDALMQQRTAGVQTEVDAEETSRAARGSSKRNLWGLRGKEDGDESKKEDGYESKKEDGYTRDERYGDSRGRASKKERKETRNSIGDDKDHDKKHHRDHRGHRTGRSDFTVESEESDLGEERLRHPTSNLRESPSRRKSEKEVIQSEESDVGEERLRHPTSNLRESPSRRKSEKEVIQSEESDVGEERLRHPTSNLRESPLRRKSEKEVIRTEIVEDGFDEGSNHSHRREMESDSRSRTDSTARTRERVERRQHERKTHEQFEGDHAEERTEERQDRRHGYRNDTGIVDERKCFAPDKGATDPSPEKLSRRQRRVESAEKERRKAAHDESFTSSDSEENGAASRTTRVSSGRHKPERRDLDNTDTASEAGVASAFVPVSKATAGGESGGVASVFDAIRSKSTKLEEKFVASEERIRQLEDEVDEERVRRIVTESELRAKKEAARRGAALDQPGDDQRRRRGGASTSSATGALEGDVPFVVGKSTSPSHNVVANVQEVMALLKAHNASACPVCAERGVRPVRGVESPSHLAAVIDCLEDELSQISLLAAFILFEGQDVASAAAAAVYVFIEFQKLSSDAMRRVRAGLGVDTLDVSTRLRRMVDQMDAKGRHIAMLRGHARKMAGRVSSSLPSKKRTPSSPLKQRARGSRPVNHAVYEENDPVSLHVAHIEHADYRDRDTSTAVQSRRELLKGVKALKESLKLTGSGAHTARAARPVHVYWKKC* # PASA_UPDATE: g8034.t1, single gene model update, valid-1, status:[pasa:asmbl_1911,status:3], valid-1 NODE_153_length_34522_cov_42.6777 . gene 28868 32612 . - . ID=g8034;Name=g8034.t1 NODE_153_length_34522_cov_42.6777 . mRNA 28868 32612 . - . ID=g8034.t1;Parent=g8034;Name=g8034.t1 NODE_153_length_34522_cov_42.6777 . five_prime_UTR 32510 32612 . - . ID=g8034.t1.utr5p1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 32302 32612 . - . ID=g8034.t1.exon1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 32302 32509 . - 0 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 32134 32196 . - . ID=g8034.t1.exon2;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 32134 32196 . - 2 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 31764 31936 . - . ID=g8034.t1.exon3;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 31764 31936 . - 2 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 31394 31625 . - . ID=g8034.t1.exon4;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 31394 31625 . - 0 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 31124 31143 . - . ID=g8034.t1.exon5;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 31124 31143 . - 2 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 30797 30947 . - . ID=g8034.t1.exon6;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 30797 30947 . - 0 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 30054 30557 . - . ID=g8034.t1.exon7;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 30054 30557 . - 2 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 29370 29812 . - . ID=g8034.t1.exon8;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 29370 29812 . - 2 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . exon 28868 29118 . - . ID=g8034.t1.exon9;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . CDS 28954 29118 . - 0 ID=cds.g8034.t1;Parent=g8034.t1 NODE_153_length_34522_cov_42.6777 . three_prime_UTR 28868 28953 . - . ID=g8034.t1.utr3p1;Parent=g8034.t1 #PROT g8034.t1 g8034 MAPAAHAEDATGVHSHALSFRGVTYRVEKQKDILHPSEWFSGRRETQTILQNANGVVESGQTLAILGSSGSGKTTFLDLIACRQSGGALSGDVLLDGVPCTESLMKEHAGYVMQDDRLLPNLTVKETLWFLAQLRLPQHMDSQAKSERVDSVINELGLRHVADTKVGGGLVRGVSGGERRRVSIGASLIVDCNILFLDEPTTGLDSFTATTTVETLVALAQRNRIVVFTIHQPRSDIFKLFDHVMLLSKGETVYFGPAKSMVDHFSSLNYPCPSYANPLDYFLDVITVDERSDASRESSMRRLTSLVAGYHRSPIFTETTRRMEEHGPMNSFSGTPQHTSRLSPSAGSSGNAAGNQKAPASSVSPHTQRRDRPPWWKITGVLILRQWKNLLRDWDAVTMRMTQLMLFALFLFIFLIRLDDDQASIQNRTGFLYESTSGPMFIGMLNAIALFPTQRDLFYRESRDGLYGSLAFVVSYTIHAIPSDLGSSLLYSVFSYWAIGLQPDGVRFLVFWGVVYLLHAWGESLGMFLLGVFYDANIANSVSALVISASALLASGFLRSTATMPMFLQDIGYAAPHKYASELLVKNEYSGLHLRCGYGEACAFNSGDQYLEEMFPDAIGNNLRNWILLMVITVSLRICAYFAFKFIRKSLR* # PASA_UPDATE: g11194.t1, single gene model update, valid-1, status:[pasa:asmbl_470,status:12], valid-1 NODE_1122_length_13787_cov_41.4214 . gene 3405 6572 . - . ID=g11194;Name=g11194.t1 NODE_1122_length_13787_cov_41.4214 . mRNA 3405 6572 . - . ID=g11194.t1;Parent=g11194;Name=g11194.t1 NODE_1122_length_13787_cov_41.4214 . five_prime_UTR 6423 6572 . - . ID=g11194.t1.utr5p1;Parent=g11194.t1 NODE_1122_length_13787_cov_41.4214 . exon 3405 6572 . - . ID=g11194.t1.exon1;Parent=g11194.t1 NODE_1122_length_13787_cov_41.4214 . CDS 3405 6422 . - 0 ID=cds.g11194.t1;Parent=g11194.t1 #PROT g11194.t1 g11194 MAGKYGASYMPPTALESLGLPPQALEERHIARNDCNGGQQRHRRRNRNKAPRHENKTADDAPEMLVFGYSCSLFRDDNRALVMEEGKHLIPWMGERDLMIDRYDARALLHEKALFDAKFASHEQPSTRVNVSWYGGDDDDVISFGKKEEVVRKPDVSDSGSDVDIEDWREDAPDDDASDVDYSVYGDDADVERQCDEERYCDLYDAEEKAMLDEEDEKRRRALEDPTAYKMVPFNYGGEAGESLGVGGMQDRSESSAAADKDTSESAEMSVPYEAPAGLSVPEDISVPLHMGEHRVIERTAALVLAHGVRMEILVKAKQARNSRFAFLDMDHPLNPYYKHVMLRMASGDYVPTAAATYGGHVQPSHAVSVDASESIAAASSALGKKPTEVDFDGEFTIFGMTVPRADARVTIDRTASHVAQNGPSFAELLREKRKGDARFAFLVEGGEHNAYFAWAVATAAEGHDVPTTLRQWFEYHREQEKESSAAEGESTAGEKAENVVATNINPLAALGVAYDSSDSDSDGEGPAPTLTENARSALALAMPAAAASAVAADASLVPTESRPNVDAATKVHVTTAPVGIDSAGGNTGEDAVLAERRRRAAEFLKKRLAVEAEASPLPTTAAPAALTKTLKAASGGDAPEQMRKSDRERHASAVRKRSRSRSSSRRPESRERSESPRHRHSRDERTSHDSRDRDRRRRSRSRSRDRQRRGAPDSLSRSRDRNRDRPRERSRERDREREKERERDRDRGKNREREKAREREGGRDGGRSRRDDSLPRKTSDTDRRRRSRSREDDESERKRSRTDSRGAPLPDVDERGARDSKKSPPVVEKREIDQSTEKGGDASARAEAAAPRKARRWDVASRGLNTNDDAHSDPPGDKSEAALRERAETDNGESKLCENQTSIREDATRGPDSSAATLPRARPATVNLGEEPVGGRNVANAQLDGSTAKAETETVRPAPIAVELPTYANPFIDNGLPPGAVPEESKQVAMDLLAKVRAAQKRKK* # ORIGINAL: g11193.t1 original gene structure, not modified by PASA NODE_1122_length_13787_cov_41.4214 AUGUSTUS gene 1411 3209 . + . ID=g11193;Name=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS mRNA 1411 3209 . + . ID=g11193.t1;Parent=g11193;Name=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 1411 1508 . + . ID=g11193.t1.exon1;Parent=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 1411 1508 . + 0 ID=cds.g11193.t1;Parent=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 1619 2399 . + . ID=g11193.t1.exon2;Parent=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 1619 2399 . + 1 ID=cds.g11193.t1;Parent=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 2556 3209 . + . ID=g11193.t1.exon3;Parent=g11193.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 2556 3209 . + 0 ID=cds.g11193.t1;Parent=g11193.t1 #PROT g11193.t1 g11193 MDAPSVTPAAVAPTVAVDASMNATIASLPRYFRIVSRSTATDASIEAELGPSMRPVTWLPCSLRTFAIDSDVRLKGTRAYESADIFGVDASSCAAVIALGIQPGDHCLDLCCAPGAKLAMMSDLAGDCGSVTGIDVSKERLAACRTVATKYSLPRTRLFLGDARSFSQPPPRFEWDPTLHAQFDDSSVKASRVTPERLSEVDSGGNANGAVDADATPTRLTEAVDFAGDYGIQSRADGCSNAMADADACGTTKKRTADANEGEADLHEKKRPRSERPKLSRRQQAKINRTYAKPPLNDQSDGNFFASAGYKCLTPTLARAALCTDRCSSQQGTLHAAATVDATDSHASDATDTISRRACDLLLYDRVLVDAECTHDGSLKHVAKYGERCGWDAAADHVMSRERVSLLSALQKELIQSGFRMLRPGGTMVYSTCSLSREQNEDVVAWFLGENASCALLCAIEFADCKGVRAEAAAPTVPALNGMPHALRFEPLSSGTSGLFIAKIVKGVVP* # ORIGINAL: g11192.t1 original gene structure, not modified by PASA NODE_1122_length_13787_cov_41.4214 AUGUSTUS gene 303 1052 . - . ID=g11192;Name=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS mRNA 303 1052 . - . ID=g11192.t1;Parent=g11192;Name=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 947 1052 . - . ID=g11192.t1.exon1;Parent=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 947 1052 . - 0 ID=cds.g11192.t1;Parent=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 720 804 . - . ID=g11192.t1.exon2;Parent=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 720 804 . - 2 ID=cds.g11192.t1;Parent=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 303 491 . - . ID=g11192.t1.exon3;Parent=g11192.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 303 491 . - 1 ID=cds.g11192.t1;Parent=g11192.t1 #PROT g11192.t1 g11192 MAAQQELTPSDVGARIESGGDVATVRYVGSVPPTEGVWYGVEWDDPSRGKHDGTFEGRKYFECRHPTGGSFVRPRKANLGVSIPDALKVRYATEDADAASAKAIVDHSGNKVPVALVGLDKVAEHQ # ORIGINAL: g11196.t1 original gene structure, not modified by PASA NODE_1122_length_13787_cov_41.4214 AUGUSTUS gene 9280 13420 . + . ID=g11196;Name=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS mRNA 9280 13420 . + . ID=g11196.t1;Parent=g11196;Name=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 9280 9397 . + . ID=g11196.t1.exon1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 9280 9397 . + 0 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 9541 10778 . + . ID=g11196.t1.exon2;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 9541 10778 . + 2 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 10961 11241 . + . ID=g11196.t1.exon3;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 10961 11241 . + 0 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 11390 11494 . + . ID=g11196.t1.exon4;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 11390 11494 . + 1 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 11773 11963 . + . ID=g11196.t1.exon5;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 11773 11963 . + 1 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 12056 12177 . + . ID=g11196.t1.exon6;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 12056 12177 . + 2 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 12353 12542 . + . ID=g11196.t1.exon7;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 12353 12542 . + 0 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 12726 12863 . + . ID=g11196.t1.exon8;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 12726 12863 . + 2 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 13036 13110 . + . ID=g11196.t1.exon9;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 13036 13110 . + 2 ID=cds.g11196.t1;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS exon 13236 13420 . + . ID=g11196.t1.exon10;Parent=g11196.t1 NODE_1122_length_13787_cov_41.4214 AUGUSTUS CDS 13236 13420 . + 2 ID=cds.g11196.t1;Parent=g11196.t1 #PROT g11196.t1 g11196 MAPPVKQQEVHKAGPLKQQNKGHKRGKHRSKGELETDAKGRVESSGRNRKLRLEANKKHKRSQQRLILKKKRQDALDKRRGVGGVDAPPRLVAVVGLTPDVNLLDVCERLKAAAQSKDATEGNDIDMAAEEPYAGGPLTFSVPAHKQRITLIPCRRDPLAVIEAAKCADVLLFVLSTDEAVDEVGEYSMTCVRAQGVPAVAHAVVGLEQVPAKRKGEVRKLLLKYVQDNFPKEDKLVSLDTLDEAALMLRHITNLKLQTVVWRERHAHVLAHGVHFAPYAPEAQGQAHDMLPPHQKDQFAGEQLGDLKITGYVRSRNLNVNSVVHLPGYGDFQLARVTAATEPVSLRQKRAGVQEVAMEDAELGVDKSGARILAVPNDNQESLVADVTPDPMAGEQTWPTEEEMMDAEGGSVVRAGKDSGDIGGHSAGDAVDAAMVSRKTTKRVPKGTSEYQAAWILDSDSEAEEDGDDDRMGGSSDGDSEADGNSDDERNVPDDAEEAMSDVGDRKASGTTVAGSEDGDMDEIALGGSKAEKYDDTVDPEEERKQYEAFVQAKQREADDEDFPDEVDTPHDAPASVRFQRFRGLKSFKNSPWDPKENLPIDYARIFQFQNFDRTKKRVLGDFSGVEVGRYVTLHLKSVPATFIESHKPEDPLVVFSLLQHENKMSVVHFAIKRHPGYDGPIPAKSELVFFTGIRSFVASPIFSQHTLGDKQKAERFLQMGRTTVASVYAPLQYPPGPVLVFKQDPQQGLALVATGALLSVNPDRVIVKKIVLTGHPYHIHKRSAVIRYMFYSRDDIMWFKPVELWTKYGRRGHIREALGTHGHMKVVFDGPIKNQDTICMSLYKRVFPKWSCRPFRFDDGVDGADRMSADDGEDEADDA* # PASA_UPDATE: g11195.t1, single gene model update, valid-1, status:[pasa:asmbl_471,status:12], valid-1 NODE_1122_length_13787_cov_41.4214 . gene 6680 8453 . - . ID=g11195;Name=g11195.t1 NODE_1122_length_13787_cov_41.4214 . mRNA 6680 8453 . - . ID=g11195.t1;Parent=g11195;Name=g11195.t1 NODE_1122_length_13787_cov_41.4214 . exon 6680 8453 . - . ID=g11195.t1.exon1;Parent=g11195.t1 NODE_1122_length_13787_cov_41.4214 . CDS 6717 8453 . - 0 ID=cds.g11195.t1;Parent=g11195.t1 NODE_1122_length_13787_cov_41.4214 . three_prime_UTR 6680 6716 . - . ID=g11195.t1.utr3p1;Parent=g11195.t1 #PROT g11195.t1 g11195 MMPLRLLTSLIGRKPDDETDAPGTAASPNTDTNTPKETNDGGDKGSLTDIAGPAVFETSPSSVSRDDKHPDFPTVPGPTSTSLMPLDAAGKQMERSTSGCFEDHVKQGLSSETFDMQQNVKAGDQRPGADVDEVSLIMAADGVDFDEARLRLFRRRMIENNIDPDTGMPLDPKAIVISKSGSAGVMRRQRSAAAILRKQRSHNALDRPAARTAPPEDRPVADRDAKTQHAHTRHNTKKVDAAAVAQLVELGFSADRAADALARTNGNVEAAALELLDRRMSAVRLSDEGVGGVAAQRTHTPQQQQQTQKQKQPQQQQQQQQQQQTRVTEPRKPIPTAHTPGESALMHALGRDAPDVSFMNATKDSDFEIALKLQRQFDEESRNEAARMQEAANYRAPDHSVFAQRSPWTMDSLGTSSGTLASADPFGLFAYSTPTTHQPVSATTATPPSYVSPSQPTDSRPFADQFDRREYRHASPSSSPQMQRQQQQQQQQHLRQQQQQQQQQQQQQQQPVPKDVQLQATTRPRNSPGNAAPTIRCFKCRGISRCPPGFDHKGGQPLQCPFCMSWNRVCAPSNPPSN* # PASA_UPDATE: g9600.t1, single gene model update, valid-1, status:[pasa:asmbl_5659,status:12], valid-1 NODE_3166_length_4134_cov_38.9189 . gene 881 3981 . - . ID=g9600;Name=g9600.t1 NODE_3166_length_4134_cov_38.9189 . mRNA 881 3981 . - . ID=g9600.t1;Parent=g9600;Name=g9600.t1 NODE_3166_length_4134_cov_38.9189 . five_prime_UTR 3981 3981 . - . ID=g9600.t1.utr5p1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . exon 3746 3981 . - . ID=g9600.t1.exon1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . CDS 3746 3980 . - 0 ID=cds.g9600.t1;Parent=g9600.t1;5_prime_partial=true NODE_3166_length_4134_cov_38.9189 . exon 3407 3529 . - . ID=g9600.t1.exon2;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . CDS 3407 3529 . - 2 ID=cds.g9600.t1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . exon 3054 3109 . - . ID=g9600.t1.exon3;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . CDS 3054 3109 . - 2 ID=cds.g9600.t1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . exon 2667 2853 . - . ID=g9600.t1.exon4;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . CDS 2667 2853 . - 0 ID=cds.g9600.t1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . exon 1335 2305 . - . ID=g9600.t1.exon5;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . CDS 1674 2305 . - 2 ID=cds.g9600.t1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . exon 881 1126 . - . ID=g9600.t1.exon6;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . three_prime_UTR 1335 1673 . - . ID=g9600.t1.utr3p1;Parent=g9600.t1 NODE_3166_length_4134_cov_38.9189 . three_prime_UTR 881 1126 . - . ID=g9600.t1.utr3p2;Parent=g9600.t1 #PROT g9600.t1 g9600 SHDYNDPAIERRQRHGDGTSQLLAQLRRHFNTTLATSKGGFWAFSYLTQVQQAVAYATAAEQWRRGKALAPGYTMGLLYWQLNDIWQAPTWSSLEYDGRWKLLHHAARRFFAPVLVSALESNGNIDVYITSDRLCILQGVVQAELWAWDGRFADVVNVTFSVGPLDSVRIASIPVDNWLSRHGLTRTTAFVWIGADAGSAGMSVTVFHPAPLVSVDLPKSRVRVLSVDASMSTAFNASHDLNSNANTAFGEGCSLKYGLESTFNVGNHPAQDGFPRDHHNAHAQHDNGHGNTLRREDGMVHLTVDRQFAAVVKTSYQSTADARTTTKKAAKEAEEPGLVGVNSVVVALSTNAPAAYVTLSSWVSGHFSDNGFHMVPGRDTHVTFSSDTAFDVEAFTANLSVISLSDTLAE* # ORIGINAL: g9599.t1 original gene structure, not modified by PASA NODE_3166_length_4134_cov_38.9189 AUGUSTUS gene 175 345 . + . ID=g9599;Name=g9599.t1 NODE_3166_length_4134_cov_38.9189 AUGUSTUS mRNA 175 345 . + . ID=g9599.t1;Parent=g9599;Name=g9599.t1 NODE_3166_length_4134_cov_38.9189 AUGUSTUS exon 175 345 . + . ID=g9599.t1.exon1;Parent=g9599.t1 NODE_3166_length_4134_cov_38.9189 AUGUSTUS CDS 175 345 . + 0 ID=cds.g9599.t1;Parent=g9599.t1 #PROT g9599.t1 g9599 ISQRLKQIDGAALDRLCDLEDYPTPGGLLIKSADINSFGIMESEDIAEESLEEDDD* # ORIGINAL: g5186.t1 original gene structure, not modified by PASA NODE_2646_length_5556_cov_40.081 AUGUSTUS gene 1853 3972 . - . ID=g5186;Name=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS mRNA 1853 3972 . - . ID=g5186.t1;Parent=g5186;Name=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 3811 3972 . - . ID=g5186.t1.exon1;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 3811 3972 . - 0 ID=cds.g5186.t1;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 3324 3493 . - . ID=g5186.t1.exon2;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 3324 3493 . - 0 ID=cds.g5186.t1;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 2508 2602 . - . ID=g5186.t1.exon3;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 2508 2602 . - 1 ID=cds.g5186.t1;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 1853 2388 . - . ID=g5186.t1.exon4;Parent=g5186.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 1853 2388 . - 2 ID=cds.g5186.t1;Parent=g5186.t1 #PROT g5186.t1 g5186 MDKYRKVVDGGASVVDEDVDMGVPKTDEVGDGSIRVASKGKVHDYVLRATSALKEGGSGSIIICGIGRSITKTVSVVEITKRRVAGLHQNTRIYYKNVTDVWAPTEPGLDSYQPPIYIDPVASRAMEEEDAASHAQRKPKKPRNRNSHGDRMEVDPSATQTGAPTNNARSSDASGAHRVRGDNRQSGLQSGRAAPRREGQAARGPRGGDGDRVAPAEGGESAERPLGQTAEGGMRQPHSRGSGGSIRGGRGGSAHRARGGHAGREGEAGEAGNDGDARRSDATRGRDGGHRGAGRGRGRGQPRGAHAQTHAHTPVNGTGE* # ORIGINAL: g5185.t1 original gene structure, not modified by PASA NODE_2646_length_5556_cov_40.081 AUGUSTUS gene 37 1486 . + . ID=g5185;Name=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS mRNA 37 1486 . + . ID=g5185.t1;Parent=g5185;Name=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 37 212 . + . ID=g5185.t1.exon1;Parent=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 37 212 . + 2 ID=cds.g5185.t1;Parent=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 742 974 . + . ID=g5185.t1.exon2;Parent=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 742 974 . + 0 ID=cds.g5185.t1;Parent=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 1267 1486 . + . ID=g5185.t1.exon3;Parent=g5185.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 1267 1486 . + 1 ID=cds.g5185.t1;Parent=g5185.t1 #PROT g5185.t1 g5185 CEHCKRLEPKIRFLAEAFRREDHCTIAAVDADKYRTQIGEKYARRYPTIKMWPKGEGEVAVVEYAGNYSSVEALLDFANEHCGTDRRLDGFLGDRAGRIPELDELAGIFAVTAAGTSDWDVAKDRLLATARASSDSNAKEYLRIAAAIVREGVEFFVAEERRLSKRADHPHVDGYKRDEAKKRLNVLRAFGAIATVAVGNDPAVARAR* # ORIGINAL: g5187.t1 original gene structure, not modified by PASA NODE_2646_length_5556_cov_40.081 AUGUSTUS gene 4386 5206 . + . ID=g5187;Name=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS mRNA 4386 5206 . + . ID=g5187.t1;Parent=g5187;Name=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 4386 4457 . + . ID=g5187.t1.exon1;Parent=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 4386 4457 . + 0 ID=cds.g5187.t1;Parent=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 4674 4765 . + . ID=g5187.t1.exon2;Parent=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 4674 4765 . + 0 ID=cds.g5187.t1;Parent=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS exon 5080 5206 . + . ID=g5187.t1.exon3;Parent=g5187.t1 NODE_2646_length_5556_cov_40.081 AUGUSTUS CDS 5080 5206 . + 1 ID=cds.g5187.t1;Parent=g5187.t1 #PROT g5187.t1 g5187 MVIKAILVFNNHGKPRLSKFYQHYTEDMQQQIIRETFQLVSRRPDNVCNFLEGGTLLGGADSKIIYRHYATLYFVFCVDSSESELGILDLIQVSWL* # ORIGINAL: novel_model_19_5b6be656 original gene structure, not modified by PASA NODE_415_length_24216_cov_40.409 . gene 9320 9622 . + . ID=novel_gene_19_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_415_length_24216_cov_40.409 . mRNA 9320 9622 . + . ID=novel_model_19_5b6be656;Parent=novel_gene_19_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_415_length_24216_cov_40.409 . five_prime_UTR 9320 9334 . + . ID=novel_model_19_5b6be656.utr5p1;Parent=novel_model_19_5b6be656 NODE_415_length_24216_cov_40.409 . exon 9320 9622 . + . ID=novel_model_19_5b6be656.exon1;Parent=novel_model_19_5b6be656 NODE_415_length_24216_cov_40.409 . CDS 9335 9556 . + 0 ID=cds.novel_model_19_5b6be656;Parent=novel_model_19_5b6be656 NODE_415_length_24216_cov_40.409 . three_prime_UTR 9557 9622 . + . ID=novel_model_19_5b6be656.utr3p1;Parent=novel_model_19_5b6be656 #PROT novel_model_19_5b6be656 novel_gene_19_5b6be656 MSETYAAVFWCFVGYAFTQCRAYATMITTPQNAKKEQCTHACMYTRPRKKERENVGFVYVGWIDRDKEVYSDA* # PASA_UPDATE: g9002.t1, single gene model update, valid-1, status:[pasa:asmbl_7038,status:12],[pasa:asmbl_7039,status:12], valid-1 NODE_415_length_24216_cov_40.409 . gene 2632 9291 . + . ID=g9002;Name=g9002.t1 NODE_415_length_24216_cov_40.409 . mRNA 2632 9291 . + . ID=g9002.t1;Parent=g9002;Name=g9002.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 2632 2767 . + . ID=g9002.t1.utr5p1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 3099 3214 . + . ID=g9002.t1.utr5p2;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 2632 2767 . + . ID=g9002.t1.exon1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 3099 4570 . + . ID=g9002.t1.exon2;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 3215 4570 . + 0 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 4760 4982 . + . ID=g9002.t1.exon3;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 4760 4982 . + 0 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 5499 5605 . + . ID=g9002.t1.exon4;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 5499 5605 . + 2 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 5836 5995 . + . ID=g9002.t1.exon5;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 5836 5995 . + 0 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 6282 6442 . + . ID=g9002.t1.exon6;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 6282 6442 . + 2 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 6583 7792 . + . ID=g9002.t1.exon7;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 6583 7792 . + 0 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 7983 8007 . + . ID=g9002.t1.exon8;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 7983 8007 . + 2 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 8272 8354 . + . ID=g9002.t1.exon9;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 8272 8354 . + 1 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 8739 8791 . + . ID=g9002.t1.exon10;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 8739 8791 . + 2 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . exon 9089 9291 . + . ID=g9002.t1.exon11;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . CDS 9089 9166 . + 0 ID=cds.g9002.t1;Parent=g9002.t1 NODE_415_length_24216_cov_40.409 . three_prime_UTR 9167 9291 . + . ID=g9002.t1.utr3p1;Parent=g9002.t1 #PROT g9002.t1 g9002 MGVLAALQVSHEALNSSLSELQHTRDASGSLEGLYNVGAALSASVGQLSRFLSARLDIYSLDNRVHPSLTGVILALESSRLSVNVVCAIALSQLSNDALVVLGRDAALAAMRPATRALELLVEAVILPLSVQPTQHVEDYVHGRTASDAYTPTSLASSRPDGEGECADGHSHAVDERSASPPPHTNDSPHAHEDADTSGAVLRNVIYGMSSPFVGDDDSTPLWSLPPWRTPLPVRRPHEHPRCLSRPDIIPAVADRTSGASQEGVSVDPFIHGSADGCVGRWWYVDGEFSMDVCAMALFCIDRLPPGGLSGFLSLLLGTSVLDGIQMQRLRARFDASLANGTPLGDIFCPVGLTEEHSYVLCRGAPIFHECDVGCVNFMDDSGKCSVGSRVVCGLVGWVVDVTVLMKAGCDDAVGRHTCVKRADYDRLRAGIEAASVGIWSFIDNQIQWNVHTCRMHGCSGPPESYEEYLNSLPPSARTIVSENVARAYATGVYEDIEHELWHEDGKKVHVMAMGKALRGPDGRVIGLYGAILDITEKKNVELLSQRHAKIRADFIANMSHEIRTPMNGVIAAAGLLLTTELTSEQLEYAEGIRTSGEFLLSIVNDILDFSKIESGKLAVDKAPFSTTEAVMTSLDLVASHLRRKNDYVELKWHIANDVPAVVVGDSTQTRQILVNLLSNAIKFTNRGAITLSVRALTCVGAYHPSASPRPTGTYGCGCVDCPSCAVMPPGSPVFDCAASTSTASLMGTVDSYAARAVDDCGSAIIACVAFSVADTGIGIAAGSLSSVFESFVQADVSTTRRYGGTGLGLAICARLALLIGGRIDVVSQEGRGSVFTLFCRLPLTSLTATASPLDGANFEQQGSVADVTRTESDVSRAETSDASRLSRSSSGGDGASTSPSLRAGVSRSACEGTHTTTATGSTSTSTGRHSDSHSAVTSYGDDATDAIMTSDRAQLQAADTCTYKKERLSNSLDDTLAARLPVSILLAEDNVINQRVALRTLEKLGYRNVGVAKDGLEVLRALGHEDYAGDALQHTRANDTNSDAEADGRARRPPKYDIILLDVHMPNMDGLEAVRMILKRWPRKEERPLIVAMTAAAFEASDQEGCLSVGMDDYVAKPFKIQAIQALLEKWGPLALDAAATFDNAEIVAK* # PASA_UPDATE: g9005.t1, single gene model update, valid-1, status:[pasa:asmbl_7040,status:12], valid-1 # PASA_UPDATE: g9005.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7041,status:12], valid-1 NODE_415_length_24216_cov_40.409 . gene 16632 23844 . + . ID=g9005;Name=g9005.t1 NODE_415_length_24216_cov_40.409 . mRNA 16632 23844 . + . ID=g9005.t1;Parent=g9005;Name=g9005.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 16632 16724 . + . ID=g9005.t1.utr5p1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 16893 16902 . + . ID=g9005.t1.utr5p2;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 16632 16724 . + . ID=g9005.t1.exon1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 16893 17348 . + . ID=g9005.t1.exon2;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 16903 17348 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 17491 18037 . + . ID=g9005.t1.exon3;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 17491 18037 . + 1 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 18328 18409 . + . ID=g9005.t1.exon4;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 18328 18409 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 18633 18835 . + . ID=g9005.t1.exon5;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 18633 18835 . + 2 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 19132 19669 . + . ID=g9005.t1.exon6;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 19132 19669 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 19889 19995 . + . ID=g9005.t1.exon7;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 19889 19995 . + 2 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 20468 20602 . + . ID=g9005.t1.exon8;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 20468 20602 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 20882 21601 . + . ID=g9005.t1.exon9;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 20882 21601 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 21943 22090 . + . ID=g9005.t1.exon10;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 21943 22090 . + 0 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 22455 23330 . + . ID=g9005.t1.exon11;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 22455 23330 . + 2 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . exon 23564 23844 . + . ID=g9005.t1.exon12;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . CDS 23564 23844 . + 2 ID=cds.g9005.t1;Parent=g9005.t1 NODE_415_length_24216_cov_40.409 . mRNA 16789 23844 . + . ID=g9005.t1.1.5b6be70c;Parent=g9005;Name=g9005.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 16789 16902 . + . ID=g9005.t1.1.5b6be70c.utr5p1;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 16789 17348 . + . ID=g9005.t1.1.5b6be70c.exon1;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 16903 17348 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 17491 18037 . + . ID=g9005.t1.1.5b6be70c.exon2;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 17491 18037 . + 1 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 18328 18409 . + . ID=g9005.t1.1.5b6be70c.exon3;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 18328 18409 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 18633 18835 . + . ID=g9005.t1.1.5b6be70c.exon4;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 18633 18835 . + 2 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 19132 19669 . + . ID=g9005.t1.1.5b6be70c.exon5;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 19132 19669 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 19889 19995 . + . ID=g9005.t1.1.5b6be70c.exon6;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 19889 19995 . + 2 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 20468 20602 . + . ID=g9005.t1.1.5b6be70c.exon7;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 20468 20602 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 20882 21601 . + . ID=g9005.t1.1.5b6be70c.exon8;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 20882 21601 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 21943 22090 . + . ID=g9005.t1.1.5b6be70c.exon9;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 21943 22090 . + 0 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 22455 23330 . + . ID=g9005.t1.1.5b6be70c.exon10;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 22455 23330 . + 2 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . exon 23564 23844 . + . ID=g9005.t1.1.5b6be70c.exon11;Parent=g9005.t1.1.5b6be70c NODE_415_length_24216_cov_40.409 . CDS 23564 23844 . + 2 ID=cds.g9005.t1.1.5b6be70c;Parent=g9005.t1.1.5b6be70c #PROT g9005.t1 g9005 MCVTDMAQYQTSSDRHQKTGVVSFRRCMRPPLSRRNTAVSSALTALCVVISCLLLLNPLHVDATVDKTTLHVVGVMTAADNVLAVTLEGSSDEAAPSQTASLWSVNGVQPSQVGRFSRTWSQDIDDSNIITMRHTYYVELALGSKLVEGTEYVILGPSGIAKTTTFNEGITLCESIHANQVGYFESSKMRFANFGIFLGDLGSRNVSDGAPSYSVLDGEGRSVAGPHTSAYLGHDNARLLSSGEHVYRLDLNDVPAGGPYRIVVHGYGASHPFGVGSNHTDVIWYTLSRGLYHKRCGMALDAAHTHWARCSCHNIVLVTDAEPGQFVTEDSCLGGCSKSPARAMAGGFHDAGDFDRGAAHTLFPAMMLETYELFRGEMPAYAFDIRESDNNIPDHLDQALWGVLYWENLQEDDGGVRAGTETERHPILPDNAATDRLTFRTFRRSWHTTACGAAIFAHASRLVREFDSPRADALMERALRAWLWLAGNTRERTSTTHMYAALQLYLTTGDDAYRRVFDDCVKEVEEHGVWPLTYYALEMSITGGGMYSPYFFGYLTTSLPTTQSVKDILLGWIDREANRVIQSLPLAPYAMGPIANVAWGSTVNAAYVANPLLLKYLLTGDEDYFNQMAALSQYALGVNPLGRSFVSGLGATPPNDILDLDSFSQIRAGKSAVPGILIFGAIANPEDYDYEKIIWSKVYPDYHSLPDLRRFSDGHTLVTANEFNSINTMHASMLYTALSIIDRRIAHTRANNSTTNSANTTDAFHGTTQYPESYSWRDSVPPLTHPLVVVLGLDVCPAPVNAYVPAGLLFNGRPGATLIPGCSEYLTLVEGALASGLGEPAMIDLLRLEPDTWHAPSFSLYCGDKERPDLSGYANLNVRIRLADAKGVPVTSYRVALSAYLGSTNWIDLVDFLVDDNGTALAPDKQGAIGGEWVRARVPMSLLRTPAYDACAVERIMFDVLPSGQFFYVSEITLDGDGTPPARLVEVVTSSDRSISLVYDSYGQAEPPSQDANDYRIDGVAPSSVGRFSVSRGQQVRDCDRLTVRHHIYLVLPGNASFISGKTYVVQALTRHGPSEYSLAFDEANVRCECIKTNQVGYSSVTGARRYAVIGVWNGHLGSRKFDSLPSYRVVRLSDGAVVHTGVANEPIDDTKLSFGSGEHAYAMDLSGVPDGGPYKIVVKGVGSSYEFSVGAETSRHISYVELRGLYHQRCGCALPRRYTEYPREICHELANVTDAEFDGGFITETGLERIDVEGSWHDAGDFDRSFAHMFISESLIVMYEAYSHVFHDAVSDIPESGNGVPDILDEAMYGVLYWEHMQAEDGGVRAGTETSGHPVRVGFGCVRQSLACEVQRGVCQKVQ* #PROT g9005.t1.1.5b6be70c g9005 MCVTDMAQYQTSSDRHQKTGVVSFRRCMRPPLSRRNTAVSSALTALCVVISCLLLLNPLHVDATVDKTTLHVVGVMTAADNVLAVTLEGSSDEAAPSQTASLWSVNGVQPSQVGRFSRTWSQDIDDSNIITMRHTYYVELALGSKLVEGTEYVILGPSGIAKTTTFNEGITLCESIHANQVGYFESSKMRFANFGIFLGDLGSRNVSDGAPSYSVLDGEGRSVAGPHTSAYLGHDNARLLSSGEHVYRLDLNDVPAGGPYRIVVHGYGASHPFGVGSNHTDVIWYTLSRGLYHKRCGMALDAAHTHWARCSCHNIVLVTDAEPGQFVTEDSCLGGCSKSPARAMAGGFHDAGDFDRGAAHTLFPAMMLETYELFRGEMPAYAFDIRESDNNIPDHLDQALWGVLYWENLQEDDGGVRAGTETERHPILPDNAATDRLTFRTFRRSWHTTACGAAIFAHASRLVREFDSPRADALMERALRAWLWLAGNTRERTSTTHMYAALQLYLTTGDDAYRRVFDDCVKEVEEHGVWPLTYYALEMSITGGGMYSPYFFGYLTTSLPTTQSVKDILLGWIDREANRVIQSLPLAPYAMGPIANVAWGSTVNAAYVANPLLLKYLLTGDEDYFNQMAALSQYALGVNPLGRSFVSGLGATPPNDILDLDSFSQIRAGKSAVPGILIFGAIANPEDYDYEKIIWSKVYPDYHSLPDLRRFSDGHTLVTANEFNSINTMHASMLYTALSIIDRRIAHTRANNSTTNSANTTDAFHGTTQYPESYSWRDSVPPLTHPLVVVLGLDVCPAPVNAYVPAGLLFNGRPGATLIPGCSEYLTLVEGALASGLGEPAMIDLLRLEPDTWHAPSFSLYCGDKERPDLSGYANLNVRIRLADAKGVPVTSYRVALSAYLGSTNWIDLVDFLVDDNGTALAPDKQGAIGGEWVRARVPMSLLRTPAYDACAVERIMFDVLPSGQFFYVSEITLDGDGTPPARLVEVVTSSDRSISLVYDSYGQAEPPSQDANDYRIDGVAPSSVGRFSVSRGQQVRDCDRLTVRHHIYLVLPGNASFISGKTYVVQALTRHGPSEYSLAFDEANVRCECIKTNQVGYSSVTGARRYAVIGVWNGHLGSRKFDSLPSYRVVRLSDGAVVHTGVANEPIDDTKLSFGSGEHAYAMDLSGVPDGGPYKIVVKGVGSSYEFSVGAETSRHISYVELRGLYHQRCGCALPRRYTEYPREICHELANVTDAEFDGGFITETGLERIDVEGSWHDAGDFDRSFAHMFISESLIVMYEAYSHVFHDAVSDIPESGNGVPDILDEAMYGVLYWEHMQAEDGGVRAGTETSGHPVRVGFGCVRQSLACEVQRGVCQKVQ* # PASA_UPDATE: g9001.t1, single gene model update, valid-1, status:[pasa:asmbl_7036,status:12], valid-1 NODE_415_length_24216_cov_40.409 . gene 316 1218 . - . ID=g9001;Name=g9001.t1 NODE_415_length_24216_cov_40.409 . mRNA 316 1218 . - . ID=g9001.t1;Parent=g9001;Name=g9001.t1 NODE_415_length_24216_cov_40.409 . five_prime_UTR 1071 1218 . - . ID=g9001.t1.utr5p1;Parent=g9001.t1 NODE_415_length_24216_cov_40.409 . exon 696 1218 . - . ID=g9001.t1.exon1;Parent=g9001.t1 NODE_415_length_24216_cov_40.409 . CDS 696 1070 . - 0 ID=cds.g9001.t1;Parent=g9001.t1 NODE_415_length_24216_cov_40.409 . exon 316 457 . - . ID=g9001.t1.exon2;Parent=g9001.t1 NODE_415_length_24216_cov_40.409 . CDS 316 457 . - 0 ID=cds.g9001.t1;Parent=g9001.t1;3_prime_partial=true #PROT g9001.t1 g9001 MVHSQSLNPFQEATFGRKSGASNRSLSSLRGSSESLDANHPDWLLLPDEVVLHIFSFVGARDLAWCVVRVCKGWHAVGTDESLWKGILCRRWKLDVRKVKLPAHAVGWRAEYGKLHNALPRRTVQTLAEHTDEVLHVAFSNGGRYIASCSKDRTAILWECYSSHSDVPPSSL # PASA_UPDATE: g9003.t1, single gene model update, valid-1, status:[pasa:asmbl_7037,status:12], valid-1 NODE_415_length_24216_cov_40.409 . gene 9320 11374 . - . ID=g9003;Name=g9003.t1 NODE_415_length_24216_cov_40.409 . mRNA 9320 11374 . - . ID=g9003.t1;Parent=g9003;Name=g9003.t1 NODE_415_length_24216_cov_40.409 . exon 11201 11374 . - . ID=g9003.t1.exon1;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . CDS 11201 11374 . - 0 ID=cds.g9003.t1;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . exon 10020 10874 . - . ID=g9003.t1.exon2;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . CDS 10020 10874 . - 0 ID=cds.g9003.t1;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . exon 9320 9830 . - . ID=g9003.t1.exon3;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . CDS 9633 9830 . - 0 ID=cds.g9003.t1;Parent=g9003.t1 NODE_415_length_24216_cov_40.409 . three_prime_UTR 9320 9632 . - . ID=g9003.t1.utr3p1;Parent=g9003.t1 #PROT g9003.t1 g9003 MAAHVRSRERLAAERAMHKVASSQELAGFDDAALEDLFSNVTDEELFVMFEDAKQKNEVLSKENIMFEKYLSRVEPQLGKAGSAPSEGPSAPFKEAANRRKSVQRKRNDASEERALKLLPEQKCDIASRELEEIRDEIERKQEDWEGVLDSYRASMEEAEIRLAELKKASYDFRRDIVQGAVNPRTEKVIAEKITRYFEDKMRQRDALIEKLRLKNSTLKVQKNKLHMQLKQKEEMGEVLHAIDFEQLKIENRQYLERIEERNEELLRLKLTAGNTLLVLNSYKKKLNVLTLESSRLKTEITQREDMQRRISSETIVVEEERSKAERINQTLRRQLDDYKVPQILQYVNEKAEQYDLTKRVSTWERKVEIAALSLRKHRKLWKEICSQTYTQHPWNALDSQAASAQLS* # ORIGINAL: g9004.t1 original gene structure, not modified by PASA NODE_415_length_24216_cov_40.409 AUGUSTUS gene 12650 15888 . + . ID=g9004;Name=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS mRNA 12650 15888 . + . ID=g9004.t1;Parent=g9004;Name=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 12650 12918 . + . ID=g9004.t1.exon1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 12650 12918 . + 0 ID=cds.g9004.t1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 13059 14028 . + . ID=g9004.t1.exon2;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 13059 14028 . + 1 ID=cds.g9004.t1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 14354 14520 . + . ID=g9004.t1.exon3;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 14354 14520 . + 0 ID=cds.g9004.t1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 14706 14827 . + . ID=g9004.t1.exon4;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 14706 14827 . + 1 ID=cds.g9004.t1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 15141 15306 . + . ID=g9004.t1.exon5;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 15141 15306 . + 2 ID=cds.g9004.t1;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS exon 15690 15888 . + . ID=g9004.t1.exon6;Parent=g9004.t1 NODE_415_length_24216_cov_40.409 AUGUSTUS CDS 15690 15888 . + 1 ID=cds.g9004.t1;Parent=g9004.t1 #PROT g9004.t1 g9004 MTVVSANPKAKFDEFFLRWFSDPAVQEALRGDLASILQNKSLPFATGGLAVLSVPSPPLSPHSPRRRTPSPDARPMNNRGGAGSLGLSKGPNLMSEFTKAATEGIPRSSSPDSAKDGKSTLATGNNSSGGRDVSGVSGSTQRSNTSQPRLSGSTIKTDALHADDQSATATPSSSASTSRDSTKELSKSIGSKQGESQSSTQSLSLSQSQSLGRTASVGKRPPQSRLAKNVPPFYFPNGRPDTDALNGHEARLKRCRDIFRSSRTNTLEVEDFVSVTVACGLPRHLSLSLFLVVDKEGTGVAMLASFEKVYADIFQRYHDLPSRVFHLLKQPENSGLVRTDFHPLLADIVNSHPGLAFLRETPEFQERYVETVIGRIFFDVNRSWSGRISLPELSRSKFCAVLSSLDTQPDINKVLDFFSYEHFYVIYCKFWELDSDHDLLIDRDDLSRHNDSALSELVVERIFSAVVNKPSPSAPDKITYDDFVFFLLAEEDKTHPTSIEYWFRCMDIDGDGVVSMFEMEYFYREQYRRMEQLCVETLSFEDCLCQTLDMVQPRDPSKITLGDLKRCKAASIFFNTFFNLAKFLEHEQRDPFAAKRENEGWGSLTDWQRYARVEYELLAMEDDGDDSAAA* # PASA_UPDATE: g9776.t1, single gene model update, valid-1, status:[pasa:asmbl_4396,status:12], valid-1 NODE_2478_length_6122_cov_38.3701 . gene 1152 4492 . + . ID=g9776;Name=g9776.t1 NODE_2478_length_6122_cov_38.3701 . mRNA 1152 4492 . + . ID=g9776.t1;Parent=g9776;Name=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 1152 1796 . + . ID=g9776.t1.exon1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 1152 1796 . + 0 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 2235 2296 . + . ID=g9776.t1.exon2;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 2235 2296 . + 0 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 2631 2757 . + . ID=g9776.t1.exon3;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 2631 2757 . + 1 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 3074 3115 . + . ID=g9776.t1.exon4;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 3074 3115 . + 0 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 3401 3533 . + . ID=g9776.t1.exon5;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 3401 3533 . + 0 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . exon 4014 4492 . + . ID=g9776.t1.exon6;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . CDS 4014 4369 . + 2 ID=cds.g9776.t1;Parent=g9776.t1 NODE_2478_length_6122_cov_38.3701 . three_prime_UTR 4370 4492 . + . ID=g9776.t1.utr3p1;Parent=g9776.t1 #PROT g9776.t1 g9776 MVAIKTIQPCIAEGGHSSKKKHKDGNQKDENKDATHQSHTSPTSSGSDGNAHHAHHAHHADAPLTSEVIDEETADIMDDEDISDKFRTKIERAHPLGQSQRHAYAALRVADVQELDAVADVDEEDGVDVMDAVDNVVDEFDDEDDDGDNGDDDDGGDTIAETIRKSATVNKHAVFKGASKVSRESRNDHKKEVESFLAEVETMAALRHPNIVLFMGACIKDPELCIVTEFMDNGSLLDLFDRKEIAYNWDLRIRLALDAAHGMAYLHSAQPPILHLDLKSANLLIDNTMRLKVADFGLSILKSATIKGDGRGSPMWLAPEMIVGDDISSAADVYSFAIVLFELMARRLPYGNLRALTKGQPPLHFALKVAYRHVRPFPAPAFAAPPYVALMRSCWEAKPASRPDFISIASALAAMDPSGFTELEPSLFNTPPPHMHITRLTKSELANFTYAGSW* # ORIGINAL: g11990.t1 original gene structure, not modified by PASA NODE_38_length_54889_cov_42.3193 AUGUSTUS gene 18989 21002 . + . ID=g11990;Name=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS mRNA 18989 21002 . + . ID=g11990.t1;Parent=g11990;Name=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 18989 19067 . + . ID=g11990.t1.exon1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 18989 19067 . + 0 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 19179 19366 . + . ID=g11990.t1.exon2;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 19179 19366 . + 2 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 19483 19627 . + . ID=g11990.t1.exon3;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 19483 19627 . + 0 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 19803 19880 . + . ID=g11990.t1.exon4;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 19803 19880 . + 2 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 20086 20206 . + . ID=g11990.t1.exon5;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 20086 20206 . + 2 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 20383 20531 . + . ID=g11990.t1.exon6;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 20383 20531 . + 1 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 20650 20726 . + . ID=g11990.t1.exon7;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 20650 20726 . + 2 ID=cds.g11990.t1;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 20994 21002 . + . ID=g11990.t1.exon8;Parent=g11990.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 20994 21002 . + 0 ID=cds.g11990.t1;Parent=g11990.t1 #PROT g11990.t1 g11990 MATKRPREEEDDFYLEPELDDNFGASDGEEGSAAEERKTGRANKKLKSSSSSDGKAGIPKPAGNNGAGADAAPALSKQAKRKQRLLKLKEKFRAKDREADGLILSGHDSHCNYWNAQYAQAFKDKITPMELEESTLQESHFVESVDVFEGERDLDKFAGYVKLAVPEWKKQFAAKQKGSDAALTGRPSLIIITTAGVRAVEIIRALGEFHTMCKIGKMFAKHFKPEEQMDYLKKNVVRIVVGTPNRLMKLVDDGALSMDGVHTVLIDCFRDVKQRNMFQTE* # PASA_UPDATE: g11992.t1, single gene model update, valid-1, status:[pasa:asmbl_6705,status:3], valid-1 NODE_38_length_54889_cov_42.3193 . gene 26009 28708 . - . ID=g11992;Name=g11992.t1 NODE_38_length_54889_cov_42.3193 . mRNA 26009 28708 . - . ID=g11992.t1;Parent=g11992;Name=g11992.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 28531 28708 . - . ID=g11992.t1.utr5p1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 28292 28708 . - . ID=g11992.t1.exon1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 28292 28530 . - 0 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 28052 28208 . - . ID=g11992.t1.exon2;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 28052 28208 . - 1 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 27839 27899 . - . ID=g11992.t1.exon3;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 27839 27899 . - 0 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 27599 27741 . - . ID=g11992.t1.exon4;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 27599 27741 . - 2 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 27239 27421 . - . ID=g11992.t1.exon5;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 27239 27421 . - 0 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 26951 27054 . - . ID=g11992.t1.exon6;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 26951 27054 . - 0 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 26568 26741 . - . ID=g11992.t1.exon7;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 26568 26741 . - 1 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 26324 26450 . - . ID=g11992.t1.exon8;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 26324 26450 . - 1 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . exon 26009 26191 . - . ID=g11992.t1.exon9;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . CDS 26096 26191 . - 0 ID=cds.g11992.t1;Parent=g11992.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 26009 26095 . - . ID=g11992.t1.utr3p1;Parent=g11992.t1 #PROT g11992.t1 g11992 MPREESQTGKPAISIRASRGAETDRMSFYSTTYSTAYQGGTGGNFEPGTTRSTRTGYSTCLRPYVPYSRDLDHIDHATVDTRDNYISMTQREITDPTYAGKDAAARALPDTVHLVHSGFSRYVNITNPVYDKGPSHPPPPLERSVYGPDEPKEVDLANVSMGYLEGSGWVHNTNIDPVTNMDPLAVAPVDSDLNLRVGAKIHGTGYDHSRDLNTTHKVVFREPAVSTGAEPMPTLVSKEPHSNAYVKSEHYSPLKIPLSQKVYTEARDIPPRSLSRTKRSDPTEFLNLTHPNPNTSHTHDTYTTPKEIVPFDRIKDAVFGKQEVSGYVDNEETYIPSFASKDHAKRTSTEYGTRYADPADVRPKGRPMAKVDFQDDAFTRTTVLQKWNQVPDPKMTIHDAHPTVARTIQSRDPMYLDTTYDHKRLST* # PASA_UPDATE: g11998.t1, single gene model update, valid-1, status:[pasa:asmbl_6697,status:12],[pasa:asmbl_6709,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 50881 53910 . - . ID=g11998;Name=g11998.t1 NODE_38_length_54889_cov_42.3193 . mRNA 50881 53910 . - . ID=g11998.t1;Parent=g11998;Name=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 53772 53910 . - . ID=g11998.t1.exon1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 53772 53910 . - 0 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 53535 53694 . - . ID=g11998.t1.exon2;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 53535 53694 . - 2 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 53178 53346 . - . ID=g11998.t1.exon3;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 53178 53346 . - 1 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 52925 53018 . - . ID=g11998.t1.exon4;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 52925 53018 . - 0 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 52649 52768 . - . ID=g11998.t1.exon5;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 52649 52768 . - 2 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 51623 52451 . - . ID=g11998.t1.exon6;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 51623 52451 . - 2 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . exon 50881 51456 . - . ID=g11998.t1.exon7;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . CDS 50928 51456 . - 1 ID=cds.g11998.t1;Parent=g11998.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 50881 50927 . - . ID=g11998.t1.utr3p1;Parent=g11998.t1 #PROT g11998.t1 g11998 MSTLTTPPGPVVPELLKERAAATFDSTEMKHYLRGGRDKAEREAEIAAIVERDPVFIKEDRYFLNRVDQYKRSLQKSARCIELTRELGLTSTEDLMALRRAVDEDLPIGLHDGMFTPTIMGQGTDEQIAKWGPLAKNYAIVGTYAQTELGHGSYVQGIETTATFDKRTQEFVLHSPTLTATKWWPGCLGKTSNHAVVLARMLINGADHGVHAFIVQLRSQRDHMPVPGVTIGDIGPKFSYETNDNGFLRFNNVRIPRENMLMRYARVDPDGTYTKPPHSKLTYATMVYMRAYIIMDASHTLGRAATISIRYSAVRRQFPSGDGEGAGADVGREVQIIDYQTQQGYLFPLMAAAYAFHFTGEYMSRLYKSFLDGVGSQDFAILPEVHATSSGLKAVTTWITTDGIEQCRKCCGGHGYSRFSGLPGLFATYVPACTYEGENTVMCLQTARFLLKAHRQAAAGKKTVGNSDYLSEPGVRTSRCQASSELDWTQPSVLLAAYKHRAARLIAETASRLEAAVGQGTAPATAFESAKMDLVRSAKAHCMLIVLRKFDEAVAATTSASLRSVLGDLLALFGAHFAERDLGEFVEDGYMSAAHCAALRGAVRLLLARIRPNAVALVDSFGFSDHLLNSALGRHDGRVYEALYALAQKEPLNATPVAPGYEEHLRPMMDKGARIASRL* # PASA_UPDATE: g11987.t1, single gene model update, valid-1, status:[pasa:asmbl_6704,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 206 2983 . - . ID=g11987;Name=g11987.t1 NODE_38_length_54889_cov_42.3193 . mRNA 206 2983 . - . ID=g11987.t1;Parent=g11987;Name=g11987.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 2835 2983 . - . ID=g11987.t1.utr5p1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 2750 2983 . - . ID=g11987.t1.exon1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 2750 2834 . - 0 ID=cds.g11987.t1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 1945 2493 . - . ID=g11987.t1.exon2;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 1945 2493 . - 2 ID=cds.g11987.t1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 1309 1779 . - . ID=g11987.t1.exon3;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 1309 1779 . - 2 ID=cds.g11987.t1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 926 1143 . - . ID=g11987.t1.exon4;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 926 1143 . - 2 ID=cds.g11987.t1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 570 690 . - . ID=g11987.t1.exon5;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 570 690 . - 0 ID=cds.g11987.t1;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . exon 206 399 . - . ID=g11987.t1.exon6;Parent=g11987.t1 NODE_38_length_54889_cov_42.3193 . CDS 206 399 . - 2 ID=cds.g11987.t1;Parent=g11987.t1;3_prime_partial=true #PROT g11987.t1 g11987 MMAPSMRLRSILGIALVIMALAGAIDAQLQLKLDTSYAPPDITATVATITALRTANTPVTNAQASQLEQLIAAYNVPARTFQLRSVKVTIAYANGTTYVGNNAATGKPYVITARSIISDNSLNDTYPGSLCSFTNIEPNSTVRFPQAAIICNPDGLVPLSALKGAANFKYLAHNVSTVIGGNPAAWFRRIRFEVPEDNTITPVTTNALRATKNVVKLRVVNPSVFDDVSANVALGNIQVELLTLDDSNNLVRLTDGLDATANVDLTIPTKVNSTVLKTFSEANRMTSVKVRITSPQVFKASDENIVIRTQAVAGVATFSNVRLLDVFEGLQLNFTATKFYPPYQRVPLEYNITLNSDAVLLSRFFNIKSPTAVALVVNPKTDTDMSRALRANFQFDTLPLISIVGASNDVVTSGLDSSLNVTVSLVGGGCITDRSITAKDGMVTFTSSVCEAGSNKIVNITATSLISGQSFWITLKPFEVVNDIDIGFISPVTGIWYWIGGTLQSTAKVAVSDIQRNMFPSLLATRRNNINIIYRDSQSNTVVGMK # PASA_UPDATE: g11993.t1, single gene model update, valid-1, status:[pasa:asmbl_6693,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 29016 32130 . + . ID=g11993;Name=g11993.t1 NODE_38_length_54889_cov_42.3193 . mRNA 29016 32130 . + . ID=g11993.t1;Parent=g11993;Name=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 29016 29116 . + . ID=g11993.t1.exon1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 29016 29116 . + 0 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 29257 29384 . + . ID=g11993.t1.exon2;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 29257 29384 . + 1 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 29539 30270 . + . ID=g11993.t1.exon3;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 29539 30270 . + 2 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 30429 30691 . + . ID=g11993.t1.exon4;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 30429 30691 . + 2 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 30786 30915 . + . ID=g11993.t1.exon5;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 30786 30915 . + 0 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . exon 31043 32130 . + . ID=g11993.t1.exon6;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . CDS 31043 31812 . + 2 ID=cds.g11993.t1;Parent=g11993.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 31813 32130 . + . ID=g11993.t1.utr3p1;Parent=g11993.t1 #PROT g11993.t1 g11993 MRAELFPLMAVACVCALAVSTQTQAGDDVLDVLLLNAELMRVGGASVMEKRFLDRAVEIHPSNGRAWTALADWHERSGRTDDAAYAVRKAAEVSTGDTTESVRARDRYARLQTSEVCGDGARDTGREFIHFHVPQDSSDMPSIDSAVDMHWSTPIAVASFGGRLGTQLITLNSHVSQAVANKEPSRAGCHFLHPCMGVRCGATDPTHPASADRAMLRYALDGAIEEYLSATMSAFVGGTRSSGPQGSPPPPSHGIGLRFRIFQSRLRVDGFMTSMPQRVSPGGRAKVSGLYAVDVPVDCRGGENVLFADPRPQAAHTTIRVGWYGADVPVAVDLVPGTAVIFPAFLRRYIPRNGSQSPRMIVLFDAEVERCMREDAEADANAGGGANGVDTGDGWKCVWFDASRRHRKDVQVAVRQLWPTPVMVHEDPAMREHIGHLSSLLLDLEQTEPTKRKSNKGGWQSAVDLFERESFSPAHARARDALRNSTYAAVRQFVIASASHVHLRREGIASRRGICNSIVDERARAPESVGSDALLRMFHDADCHPPPLSLTVEVVHAWGCINRHSHSNAPHVHPEAHVSGVFYVSTGGDAQSAVFHEDPRPGAAALSLNEAAEDASGPPLHKDACDSAYACDAPYRDDGLPLRIGSTAGMFILFPGFLEHHVSAHRTDDARIAVSFNARVSFGDADCRGDGHCWTLSIPRRHAGTGH* # PASA_UPDATE: g11988.t1, single gene model update, valid-1, status:[pasa:asmbl_6692,status:12],[pasa:asmbl_6698,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 4540 15191 . + . ID=g11988;Name=g11988.t1 NODE_38_length_54889_cov_42.3193 . mRNA 4540 15191 . + . ID=g11988.t1;Parent=g11988;Name=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 4540 4621 . + . ID=g11988.t1.exon1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 4540 4621 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 4823 5359 . + . ID=g11988.t1.exon2;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 4823 5359 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 5661 6152 . + . ID=g11988.t1.exon3;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 5661 6152 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 6389 6536 . + . ID=g11988.t1.exon4;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 6389 6536 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 6719 6909 . + . ID=g11988.t1.exon5;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 6719 6909 . + 1 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 7126 7354 . + . ID=g11988.t1.exon6;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 7126 7354 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 7548 7758 . + . ID=g11988.t1.exon7;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 7548 7758 . + 1 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 7985 8068 . + . ID=g11988.t1.exon8;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 7985 8068 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 8264 8362 . + . ID=g11988.t1.exon9;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 8264 8362 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 8554 8697 . + . ID=g11988.t1.exon10;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 8554 8697 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 8914 9389 . + . ID=g11988.t1.exon11;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 8914 9389 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 9616 9716 . + . ID=g11988.t1.exon12;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 9616 9716 . + 1 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 9900 10491 . + . ID=g11988.t1.exon13;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 9900 10491 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 10645 10775 . + . ID=g11988.t1.exon14;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 10645 10775 . + 1 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 10949 11041 . + . ID=g11988.t1.exon15;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 10949 11041 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 11155 11301 . + . ID=g11988.t1.exon16;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 11155 11301 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 11447 11572 . + . ID=g11988.t1.exon17;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 11447 11572 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 11745 11918 . + . ID=g11988.t1.exon18;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 11745 11918 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 12143 12293 . + . ID=g11988.t1.exon19;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 12143 12293 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 12528 12883 . + . ID=g11988.t1.exon20;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 12528 12883 . + 1 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 13013 13296 . + . ID=g11988.t1.exon21;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 13013 13296 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 13399 13812 . + . ID=g11988.t1.exon22;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 13399 13812 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 13954 14022 . + . ID=g11988.t1.exon23;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 13954 14022 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 14197 14371 . + . ID=g11988.t1.exon24;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 14197 14371 . + 0 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . exon 14486 15191 . + . ID=g11988.t1.exon25;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . CDS 14486 14784 . + 2 ID=cds.g11988.t1;Parent=g11988.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 14785 15191 . + . ID=g11988.t1.utr3p1;Parent=g11988.t1 #PROT g11988.t1 g11988 MAKSFSAAHLWVCVVVALGCASCANSQVHLAFDVSTAVPNFFTLYADVLSGSGTAAASAQTMLMYNTPSNSSLLATITVRILDASNNLVTTGPNSQLKITATSVLYNNSLTDNWKGRLCTMPGLSISSDQQLPFYFITCVIDSAHPKGSVSVNATAGIASFSFLTLTAPTIDLTLGNDALLSARSLRFEVEGSAVPVLLSQPHHATFPAAFYRLTADTTMPTTIVANTAFPTMKVEAMFANPLYQNPSFPSAVQYLPLTFGIDANVNVDLTIPRVLDGKTLKPFETYAGLLISSLVKMGGAGLTVSSKKEEMFRVRMSNGVATFNNVRVLDVYTNLRFNLTATKPHPFYYRVPLDYSDAGVLLTPAFNVTAQQVTQLVLDPATDTDMSPKMDAFFSFDTPPVIRLLDASGMQVFSGPDSTLELTVTVSSNLCLTSQKIKAVRGAAVFKDSVCQDATGAVLTFTTTSTFGGSTMNVATKPFNVGREIRIGFLIPRTGAWGWVGGSFETASILAFDNIKKGKYPALLPGFQDKLIPLVRDSASDALIGVSESLTLIRNARVKLIIGPGEEPVPPPVSQVCTVKEIGQLSYTAPSEVLSDKTVFPYFSRIGRSVGIEGIAMAKFLANRGWTQIALITSVSFPISKGFLETSRLVGINILTEISVPTEGFPDLTESLTKVKESGARIILNTIENEASWHLYKEAMRMGVAGQDGYQWVAGSTVAGTFPFANQFHTCSTPPICTAGMRGYVFLLNKYGDPTNDADGAWASLLTDYLALDPVTHNGEIHMPTSAVLPFLGLCYDTVMVFATALNQFIINNRTITGPDFATEVRKVVYQGVTGTIRFDANGDRIGFEGYVLNLHANNTANRPTDSSTTFAIPSVVLMPDKDQPLVEVPVDPRGFRYPDGVPMDRRIFLGVNLAAGPSTTFLSDRVPLSHVCGQTCTRVNTTLSKPWIPGNCPVYMASKELPGIIPSALNAQVAAEFPAGLSAMVTAQVTALLTAKLGASDAPTIAACGAAGQTASSAGCQGLLIPQTAVGNSTRCLALIQANMANLCGASPAPACVPTAGCQALVAPTLPVVAACGVNLVTGSASTLGAAACYSKLAPRHRMISACGTDGTKAISIACIALADELKYCAEVALANTYANGLCTSNNLCRCNAKPASATTPGWIGADCSIPQCAQTCVKGTCTGPDTCTCAPYWTGTACEIAICQNTCTAGHGRCDEDPNIVGTNGTGVYPNKCFCAAGFYHGALKTCENTCQCDPKGTLATSLLANGTYACGESDGACLCKSGYSGQSCHTKAVPIVVVAAPAAAGGALILILIILFARWYLRRQKEAAELANVDWMINYEQIQLTGKMAAFGSRMGSMTGSRAGSRAGSRIGSRLSQRSGGSGGSEGRNQQTFCTVGVYTGLRVAIRMINKPVVDLNNNVRRELRVMRDLRHTNVVNFIGVCVTPPNVCIVTEYAGKGSLADVLSNADLPLDWAFKYSLARDIANGMEFLHKSEIKSHGRLKSSNCLIDQRWVLKLTDFGLHEFKAGQVVEDESEYKTYAKLLWTAPEILRNPPLQNFNGKKAVEAWQSTLDYGVGTPAGDIYSYGIVMWELLTREPPYSNSEDEPKGIIEKVKAGNHRPDVPEDCPEKFLAFMKKCWAEVPEERHSTFGEIIRQIKKIHPQSGNLVDNMIRMLEQYSSNLESLVEERTAELGVEKERAEELLYRMIPRKVAEDLKLGKPVKAETFEEVTIYFSDIVGFTAIAGRSTPIQVVDLLNALYTTFDAIIDHHDVYKVETIGDAYMVVSGLPIRNGKRHAPEMANMSLDLLASINGFQIPHLPGEQLKLRIGLHSGTAVAGVVGLKMPRYCLFGDTVGTASKMESGGAPLRIHISECTNKVLQESGLGYDTEHRGEMQLKGKPSIHTYWLWGRSGFDSSTLPYVDRNEELPAGH* # PASA_UPDATE: g11991.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6700,status:3], valid-1 # PASA_UPDATE: g11991.t1, single gene model update, valid-1, status:[pasa:asmbl_6699,status:3], valid-1 NODE_38_length_54889_cov_42.3193 . gene 21906 25921 . + . ID=g11991;Name=g11991.t1 NODE_38_length_54889_cov_42.3193 . mRNA 21906 25921 . + . ID=g11991.t1.1.5b6be70b;Parent=g11991;Name=g11991.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 21906 22083 . + . ID=g11991.t1.1.5b6be70b.utr5p1;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . five_prime_UTR 22336 22638 . + . ID=g11991.t1.1.5b6be70b.utr5p2;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 21906 22083 . + . ID=g11991.t1.1.5b6be70b.exon1;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 22336 23688 . + . ID=g11991.t1.1.5b6be70b.exon2;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 22639 23688 . + 0 ID=cds.g11991.t1.1.5b6be70b;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 23807 24642 . + . ID=g11991.t1.1.5b6be70b.exon3;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 23807 24642 . + 0 ID=cds.g11991.t1.1.5b6be70b;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 24868 25201 . + . ID=g11991.t1.1.5b6be70b.exon4;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 24868 25201 . + 1 ID=cds.g11991.t1.1.5b6be70b;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 25353 25921 . + . ID=g11991.t1.1.5b6be70b.exon5;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 25353 25628 . + 0 ID=cds.g11991.t1.1.5b6be70b;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 25629 25921 . + . ID=g11991.t1.1.5b6be70b.utr3p1;Parent=g11991.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . mRNA 21906 25921 . + . ID=g11991.t1;Parent=g11991;Name=g11991.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 21906 22148 . + . ID=g11991.t1.utr5p1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 22336 22638 . + . ID=g11991.t1.utr5p2;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . exon 21906 22148 . + . ID=g11991.t1.exon1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . exon 22336 23688 . + . ID=g11991.t1.exon2;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . CDS 22639 23688 . + 0 ID=cds.g11991.t1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . exon 23807 24642 . + . ID=g11991.t1.exon3;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . CDS 23807 24642 . + 0 ID=cds.g11991.t1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . exon 24868 25201 . + . ID=g11991.t1.exon4;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . CDS 24868 25201 . + 1 ID=cds.g11991.t1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . exon 25353 25921 . + . ID=g11991.t1.exon5;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . CDS 25353 25628 . + 0 ID=cds.g11991.t1;Parent=g11991.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 25629 25921 . + . ID=g11991.t1.utr3p1;Parent=g11991.t1 #PROT g11991.t1.1.5b6be70b g11991 MDSSRSPRTAAMQMHTISSDAIGSTDVWVEDETSSVQSMGIAGHPDPTRTDRSISRVSSRRGSLQSSSAARGGMMVGAGGVGATASVAGMQSRIERAPSSRSTESKESTSRAPKPTDLLYLLQGYEPVRGPIQTQMALVYLLFIAFSGSAEGLRWAPNLRLYLIFVYIVAALLIWEVTRMIFFVRPLSVAPMYITLVPMAIMLALSREAHIVVGVLWYASILIIYLQSGATKLRNHVAFFTAAYIGVYFAVIGFMDFFYTCEFPCIEKFKGDKLDPPIEWREEATFVLCLVLMAFSYKMLHRFIELYAKTLVDREAEANTLLQTNVELRKELKKLKSPNVTYDLESPLAKVLDILVATRQNQSTDVAETLDFVISVLQSNVHKLFSPDLYDNPVDEDLHTWLDTLLLSDSTARTTGAAIAVASTSTSANSGSGQIVSHVPSVAVSLKRVYSYDRSNGSITVGSGSGSGDGTSAHGIVSNVHLNMPARVHTTEPQILEYLNTFTEWEFDVFELAQRTNGRPLYYLSKAIFERHFFRQKFLIDDEVLSEWLQKIEQGYLSHNPYHNSTHAADVTQTMHFFLTHDSLYHVLSDEEFFAAVVSCIIHDFEHPGTNNAFHINTGSELAVRYNDRSVLENHHCAAAFTLLSNDSCNILANLDEPTFKLIREMVVNLVLATDMAHHFEYVGKFKNKLQTGLNPEDRDDRRLMLEVGIKCADVSNPAKPRHVCTRWADQIMEEFYRQGDEERRRDMTVSMFMDRHTTNMPKCQAGFVDFIVGPMYESWLSFLSGDEEVKVGGYIKSNMEYWKGLVDEAEAMLVAKKMSSSEPPAVAVAR* #PROT g11991.t1 g11991 MDSSRSPRTAAMQMHTISSDAIGSTDVWVEDETSSVQSMGIAGHPDPTRTDRSISRVSSRRGSLQSSSAARGGMMVGAGGVGATASVAGMQSRIERAPSSRSTESKESTSRAPKPTDLLYLLQGYEPVRGPIQTQMALVYLLFIAFSGSAEGLRWAPNLRLYLIFVYIVAALLIWEVTRMIFFVRPLSVAPMYITLVPMAIMLALSREAHIVVGVLWYASILIIYLQSGATKLRNHVAFFTAAYIGVYFAVIGFMDFFYTCEFPCIEKFKGDKLDPPIEWREEATFVLCLVLMAFSYKMLHRFIELYAKTLVDREAEANTLLQTNVELRKELKKLKSPNVTYDLESPLAKVLDILVATRQNQSTDVAETLDFVISVLQSNVHKLFSPDLYDNPVDEDLHTWLDTLLLSDSTARTTGAAIAVASTSTSANSGSGQIVSHVPSVAVSLKRVYSYDRSNGSITVGSGSGSGDGTSAHGIVSNVHLNMPARVHTTEPQILEYLNTFTEWEFDVFELAQRTNGRPLYYLSKAIFERHFFRQKFLIDDEVLSEWLQKIEQGYLSHNPYHNSTHAADVTQTMHFFLTHDSLYHVLSDEEFFAAVVSCIIHDFEHPGTNNAFHINTGSELAVRYNDRSVLENHHCAAAFTLLSNDSCNILANLDEPTFKLIREMVVNLVLATDMAHHFEYVGKFKNKLQTGLNPEDRDDRRLMLEVGIKCADVSNPAKPRHVCTRWADQIMEEFYRQGDEERRRDMTVSMFMDRHTTNMPKCQAGFVDFIVGPMYESWLSFLSGDEEVKVGGYIKSNMEYWKGLVDEAEAMLVAKKMSSSEPPAVAVAR* # ORIGINAL: g11989.t1 original gene structure, not modified by PASA NODE_38_length_54889_cov_42.3193 AUGUSTUS gene 15437 18573 . - . ID=g11989;Name=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS mRNA 15437 18573 . - . ID=g11989.t1;Parent=g11989;Name=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 18058 18573 . - . ID=g11989.t1.exon1;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 18058 18573 . - 0 ID=cds.g11989.t1;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 17659 17795 . - . ID=g11989.t1.exon2;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 17659 17795 . - 0 ID=cds.g11989.t1;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 17181 17525 . - . ID=g11989.t1.exon3;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 17181 17525 . - 1 ID=cds.g11989.t1;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 16693 16977 . - . ID=g11989.t1.exon4;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 16693 16977 . - 1 ID=cds.g11989.t1;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS exon 15437 16388 . - . ID=g11989.t1.exon5;Parent=g11989.t1 NODE_38_length_54889_cov_42.3193 AUGUSTUS CDS 15437 16388 . - 1 ID=cds.g11989.t1;Parent=g11989.t1 #PROT g11989.t1 g11989 MSGNEPPAAAVGAAFAGCLGIAILLAALLFRRRRLFRATAHQPETSTGRMPRKITNPSHRSSRLHSEGSVFPTESQSSVRDAVASVDATGNERRDASDEVGNIVLGNSTAILHGEADSADAMQAVPPQSCEQHELCVGSGNAGGLAGFVVERMSVLTGDPCANCGTVAAMRKCSYRLCRQCCLRRADTVCKPHGTFHRRIQQLITKSSEGRQIELDLSYCSLVTCPAEVCLLVHLVSLNLSDNQLTCLPSEIGQLRCVEELFLHYNKLTSIPESICDMSSLAELWLKENRLTRLPEGLGRLRNLQILILTNNRLAGLPASIGDLAALQELCLYSNCLSFLPDSFCRLRKLSQLYLGENPLVRLPDRFGDVASLREVDVSECMLTELPPTMHRLINLTHLWLNNNRIAELPGRMGELRSLTDLYMRSNRLAHIPWDMMRMRLFNFHASYNPFTNPMEESIGDFCGVIVGVPSLVECALRALVRSVGTEEALAAAYGWSVPLPSKGNRLKSGATRLSSTHALPGESTQVATTSESRDGSCVTAADGAGAHLLGRAEIASLVGRLAEIKEQVEPIVEMSANPLRQMASSPSYQDKTSCQNKGSVAVCATPVASSAGDVAVGAVGAVGAVGAVRAPRVGETGSDPLTPTHAHPPHYLERPSYLADCLPANVKALVRRLQLCSHCGSPTFAHWCSAVRFADSFGSMHLPFHIVCCSNYCLHRMNIELDAVAAASAASRAARRGRVMSCP* # PASA_UPDATE: g11997.t1, single gene model update, valid-1, status:[pasa:asmbl_6702,status:12], valid-1 # PASA_UPDATE: g11997.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6703,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 49738 50886 . + . ID=g11997;Name=g11997.t1 NODE_38_length_54889_cov_42.3193 . mRNA 49738 50886 . + . ID=g11997.t1;Parent=g11997;Name=g11997.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 49738 49784 . + . ID=g11997.t1.utr5p1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . exon 49738 49858 . + . ID=g11997.t1.exon1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . CDS 49785 49858 . + 0 ID=cds.g11997.t1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . exon 49943 50082 . + . ID=g11997.t1.exon2;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . CDS 49943 50082 . + 1 ID=cds.g11997.t1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . exon 50199 50329 . + . ID=g11997.t1.exon3;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . CDS 50199 50329 . + 2 ID=cds.g11997.t1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . exon 50468 50534 . + . ID=g11997.t1.exon4;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . CDS 50468 50534 . + 0 ID=cds.g11997.t1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . exon 50662 50886 . + . ID=g11997.t1.exon5;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . CDS 50662 50792 . + 2 ID=cds.g11997.t1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 50793 50886 . + . ID=g11997.t1.utr3p1;Parent=g11997.t1 NODE_38_length_54889_cov_42.3193 . mRNA 49738 50886 . + . ID=g11997.t1.1.5b6be70b;Parent=g11997;Name=g11997.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 49738 49784 . + . ID=g11997.t1.1.5b6be70b.utr5p1;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 49738 49858 . + . ID=g11997.t1.1.5b6be70b.exon1;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 49785 49858 . + 0 ID=cds.g11997.t1.1.5b6be70b;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 49943 50082 . + . ID=g11997.t1.1.5b6be70b.exon2;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 49943 50082 . + 1 ID=cds.g11997.t1.1.5b6be70b;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 50199 50534 . + . ID=g11997.t1.1.5b6be70b.exon3;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 50199 50467 . + 2 ID=cds.g11997.t1.1.5b6be70b;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 50662 50886 . + . ID=g11997.t1.1.5b6be70b.exon4;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 50468 50534 . + . ID=g11997.t1.1.5b6be70b.utr3p1;Parent=g11997.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 50662 50886 . + . ID=g11997.t1.1.5b6be70b.utr3p2;Parent=g11997.t1.1.5b6be70b #PROT g11997.t1 g11997 MWQYLWVHLAHFLTRPFPVHRRAGIRLVLLTVGALFFVPQAYAITVSTSRFCEQPLFMVTVASIGLTMLMYGLLICFVFMEPVPDSLKAIHHVFGAATGIFAAAYLHYVQNASSCVDTAPELYYVSAIFSAFGVLSLAFFCIVAPFWIWNKLRPRSCLNTRERVGFCYECVGCCPCVWHV* #PROT g11997.t1.1.5b6be70b g11997 MWQYLWVHLAHFLTRPFPVHRRAGIRLVLLTVGALFFVPQAYAITVSTSRFCEQPLFMVTVASIGLTMLMYGLLICFVFMEPVPDSLKAIHHVFGAATGIFAAAYLHYVQNASSCVSTRRCLSVGHHLLIYLFILYRCIGLNSLAVANVCGDCVHELLRA* # PASA_UPDATE: g11995.t1, single gene model update, valid-1, status:[pasa:asmbl_6707,status:3], valid-1 # PASA_UPDATE: g11995.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_6706,status:3], valid-1 NODE_38_length_54889_cov_42.3193 . gene 37062 42728 . - . ID=g11995;Name=g11995.t1 NODE_38_length_54889_cov_42.3193 . mRNA 37062 42728 . - . ID=g11995.t1;Parent=g11995;Name=g11995.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 42659 42728 . - . ID=g11995.t1.utr5p1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 42491 42728 . - . ID=g11995.t1.exon1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 42491 42658 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 42159 42349 . - . ID=g11995.t1.exon2;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 42159 42349 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 41821 42032 . - . ID=g11995.t1.exon3;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 41821 42032 . - 1 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 41442 41614 . - . ID=g11995.t1.exon4;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 41442 41614 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 41194 41317 . - . ID=g11995.t1.exon5;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 41194 41317 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 39703 40980 . - . ID=g11995.t1.exon6;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 39703 40980 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 38619 39595 . - . ID=g11995.t1.exon7;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 38619 39595 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 38383 38485 . - . ID=g11995.t1.exon8;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 38383 38485 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 38250 38281 . - . ID=g11995.t1.exon9;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 38250 38281 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 37921 38095 . - . ID=g11995.t1.exon10;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 37921 38095 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 37665 37763 . - . ID=g11995.t1.exon11;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 37665 37763 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 37401 37546 . - . ID=g11995.t1.exon12;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 37401 37546 . - 2 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . exon 37062 37230 . - . ID=g11995.t1.exon13;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . CDS 37177 37230 . - 0 ID=cds.g11995.t1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 37062 37176 . - . ID=g11995.t1.utr3p1;Parent=g11995.t1 NODE_38_length_54889_cov_42.3193 . mRNA 37062 42728 . - . ID=g11995.t1.1.5b6be70b;Parent=g11995;Name=g11995.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 42659 42728 . - . ID=g11995.t1.1.5b6be70b.utr5p1;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 42491 42728 . - . ID=g11995.t1.1.5b6be70b.exon1;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 42491 42658 . - 0 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 42159 42349 . - . ID=g11995.t1.1.5b6be70b.exon2;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 42159 42349 . - 0 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 41821 42032 . - . ID=g11995.t1.1.5b6be70b.exon3;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 41821 42032 . - 1 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 41442 41614 . - . ID=g11995.t1.1.5b6be70b.exon4;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 41442 41614 . - 2 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 41194 41317 . - . ID=g11995.t1.1.5b6be70b.exon5;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 41194 41317 . - 0 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 39703 40980 . - . ID=g11995.t1.1.5b6be70b.exon6;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 39703 40980 . - 2 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 38619 39595 . - . ID=g11995.t1.1.5b6be70b.exon7;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 38619 39595 . - 2 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 38383 38485 . - . ID=g11995.t1.1.5b6be70b.exon8;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 38383 38485 . - 0 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 38250 38281 . - . ID=g11995.t1.1.5b6be70b.exon9;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 38250 38281 . - 2 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 37665 38095 . - . ID=g11995.t1.1.5b6be70b.exon10;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . CDS 37889 38095 . - 0 ID=cds.g11995.t1.1.5b6be70b;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 37401 37546 . - . ID=g11995.t1.1.5b6be70b.exon11;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . exon 37062 37230 . - . ID=g11995.t1.1.5b6be70b.exon12;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 37665 37888 . - . ID=g11995.t1.1.5b6be70b.utr3p1;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 37401 37546 . - . ID=g11995.t1.1.5b6be70b.utr3p2;Parent=g11995.t1.1.5b6be70b NODE_38_length_54889_cov_42.3193 . three_prime_UTR 37062 37230 . - . ID=g11995.t1.1.5b6be70b.utr3p3;Parent=g11995.t1.1.5b6be70b #PROT g11995.t1 g11995 MAEIRRIAILVVTAFALFAMCGGQTFTLIHTSSLRGFVQEQNISTTYLQKNGNLTATARTSTFGGLPRVRTFVDQIRAQRNNTVLALDGGQVIGFTPFDQLFNGEASKFIYQMIKFNAVGLGNSDFLHGPQTYVDGFAKNVLYDIVISNLDIVGPASGPVKAALKPYAIYDVPTTDGGTMKVGVVGWVDLAMCDQTTCKVGAVTVTVKEPTSALNFAVSQVRAQGVEAIIAIGGWLENLSTGRNTAAKINFVDVFIFNSNTADMHMSDVVTDGLTTRAATYPVTITTPNGGSAIGVGVAGGALYAGMVNLTFSNGNLASYDGKPFLLHGCNNPNAPQCYASDPEAAALVDTYVVELNKYRRQVIGAAGTAVDGLRERCRFRECTAGNFMIDAMRWKMGEKCSIAFINGGSIRASFAIGNVTFGDVQSMHPFSNAIATFEATGATILVALENSVSLIPLQPENITAATIQVNAVSGTGRFFQMGGIRVQVDPGKAVGSRVFRAEVLQPDNSWADMDGTTRYKVCSTSFSRQGGDGYVSFRDQALKVYDFGPTVDLTMRDYVVDLYSQGKNLSVFLENRIKYVYDSDLLPKTCPKGCYHGTCIDYNKCQCEADWLGDDCSIDNRKKDIVPIVVPVVIGVSAIIASVIGYLLYKRRMAQIAAAMAWKIEYNELQMRAWGDAGGSKVGSKVGSQMFAASASSKASLGSKKSDDMGLGKQVFTKIAMYKGNLVSVRPVSSTAVFNISDAERSFLIKMMDCRNANINQFVGACFDAPPNNVIVYEYAARGSLQDVLSNVNYKLDWMFKYSLATDAAKGLQYLHTTPLVSHGRLSSSNLVVDSRWVCKVTDFGLGWIADKLRNDEDESDFNRASRQLWIAPEILQAGPAAYPSGTQKGDVYSFGIVLTELITRELPFEALQLEPQEVVRQVRDKGLRPTLPQDDEVPKKVVALVDQCVAADPAARPTFAFIAKRIRDINPDAGVNVVDAMTKMLEAYAHNLEGLVEERTKELNDEKLKTDELLYRMLPRSVAEDLKAGKQINAESFDSVTIFFSDIVGFTVIAGQSTPLQVVDLLNDLYTAFDDRIDQYDVYKVETIGDAYMVASGLPSRNGNRHAGEIGSMALDLLNATTTFTIRHMPSAQLQLRVGLHSGPVVSGVVGLKMPRYCLFGDTVNTASRMESGGLALRIHLSDSTATILRELGGYHLDLRGTLAVKGKGDMTTYWLTGKDGWTKALPDLSKAASLSQHHFK* #PROT g11995.t1.1.5b6be70b g11995 MAEIRRIAILVVTAFALFAMCGGQTFTLIHTSSLRGFVQEQNISTTYLQKNGNLTATARTSTFGGLPRVRTFVDQIRAQRNNTVLALDGGQVIGFTPFDQLFNGEASKFIYQMIKFNAVGLGNSDFLHGPQTYVDGFAKNVLYDIVISNLDIVGPASGPVKAALKPYAIYDVPTTDGGTMKVGVVGWVDLAMCDQTTCKVGAVTVTVKEPTSALNFAVSQVRAQGVEAIIAIGGWLENLSTGRNTAAKINFVDVFIFNSNTADMHMSDVVTDGLTTRAATYPVTITTPNGGSAIGVGVAGGALYAGMVNLTFSNGNLASYDGKPFLLHGCNNPNAPQCYASDPEAAALVDTYVVELNKYRRQVIGAAGTAVDGLRERCRFRECTAGNFMIDAMRWKMGEKCSIAFINGGSIRASFAIGNVTFGDVQSMHPFSNAIATFEATGATILVALENSVSLIPLQPENITAATIQVNAVSGTGRFFQMGGIRVQVDPGKAVGSRVFRAEVLQPDNSWADMDGTTRYKVCSTSFSRQGGDGYVSFRDQALKVYDFGPTVDLTMRDYVVDLYSQGKNLSVFLENRIKYVYDSDLLPKTCPKGCYHGTCIDYNKCQCEADWLGDDCSIDNRKKDIVPIVVPVVIGVSAIIASVIGYLLYKRRMAQIAAAMAWKIEYNELQMRAWGDAGGSKVGSKVGSQMFAASASSKASLGSKKSDDMGLGKQVFTKIAMYKGNLVSVRPVSSTAVFNISDAERSFLIKMMDCRNANINQFVGACFDAPPNNVIVYEYAARGSLQDVLSNVNYKLDWMFKYSLATDAAKGLQYLHTTPLVSHGRLSSSNLVVDSRWVCKVTDFGLGWIADKLRNDEDESDFNRASRQLWIAPEILQAGPAAYPSGTQKGDVYSFGIVLTELITRELPFEALQLEPQEVVRQVRDKGLRPTLPQDDEVPKKVVALVDQCVAADPAARPTFAFIAKRIRDINPDAGVNVVDAMTKMLEAYAHNLEGLVEERTKELNDEKLKTDELLYRMLPRSVAEDLKAGKQINAESFDSVTIFFSDIVGFTVIAGQSTPLQVVDLLNDLYTAFDDRIDQYDVYKVETIGDAYMVASGLPSRNGNRHAGEIGSMALDLLNATTTFTIRHMPSAQLQLRVGLHSGVCYPVSVCP* # PASA_UPDATE: g11994.t1, single gene model update, valid-1, status:[pasa:asmbl_6701,status:3], valid-1 NODE_38_length_54889_cov_42.3193 . gene 32783 37019 . + . ID=g11994;Name=g11994.t1 NODE_38_length_54889_cov_42.3193 . mRNA 32783 37019 . + . ID=g11994.t1;Parent=g11994;Name=g11994.t1 NODE_38_length_54889_cov_42.3193 . five_prime_UTR 32783 32944 . + . ID=g11994.t1.utr5p1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 32783 33026 . + . ID=g11994.t1.exon1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 32945 33026 . + 0 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 33210 33448 . + . ID=g11994.t1.exon2;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 33210 33448 . + 2 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 33572 33962 . + . ID=g11994.t1.exon3;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 33572 33962 . + 0 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 34082 34259 . + . ID=g11994.t1.exon4;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 34082 34259 . + 2 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 34430 34586 . + . ID=g11994.t1.exon5;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 34430 34586 . + 1 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 34687 34914 . + . ID=g11994.t1.exon6;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 34687 34914 . + 0 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 35037 35126 . + . ID=g11994.t1.exon7;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 35037 35126 . + 0 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 35239 35455 . + . ID=g11994.t1.exon8;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 35239 35455 . + 0 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . exon 35592 37019 . + . ID=g11994.t1.exon9;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . CDS 35592 36529 . + 2 ID=cds.g11994.t1;Parent=g11994.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 36530 37019 . + . ID=g11994.t1.utr3p1;Parent=g11994.t1 #PROT g11994.t1 g11994 MLNMSLPDIRAATEKEEMGSLEDSGSYDSGIDSVGSGSVSSLSESAPKRKPSLTRRPSLRRASLDKSIMPDGRRLSNDSTYSDDDGVNSDAKGRKKSLDEDEMESNKKRTWGQRRLLGFSKSLSLRRKSSCEGVPSPSESDALSERAQSVECVAGSLSAGSSPCVQRRASTSSGSVGSASSSTADLTAEIAEDDGTGIRKLSADGMEFHIQKSDGRLLIVGGALEKLVAKMADVEDLDIEFFNTFLLTFRHVIAPAAFLQMLIERIDSHSAPSNSPSIDIGTAEHREQAGCDIIVLRTTNVIVKWMSRTWYDFHNHEDILVLVDSLLERMTSRGHEALARRIRNTMAQKATEWEASLVPDPVLVHEPLNFDEITHKDLAGQLTLIELDLFRRIQSEEVIVQLWCGGEEFYAAKRNLTRYVEWFNKVSAWVSTEICLAPNHKKRAQIIERFVKVAKGCLRLSNYSTLYAIVSGLNHGAVYRMKKTWEVVSHRSLASLRELEALVDPAHNFTTYRTLLKKQRLPAIPIMGLYLKDLTFINEIPKKLNNGFVNVFKLRTVSERIAGLGGYQRSDYSDVIQPMPRVAAYCRAINRAPEHVLYQYSYLCEPRSSSLNDKLKIIENLEAQRERTDSAASSPASSIAKRAPASPSPLSPRGPVSPRGAGSSGSTATAVASAMDMPAFAPAGRRCSADSDSFLRRSSTVSSSSTSSVMTTSSDTSIISLNSALALPVDGAPTSRKTSSASLPSVQDEDEEAMDPNALSLDRAQLLMARGGRPLSICREESGDDDAAVRCIGPTGAACVGGDGEHDDDDEGEECTPTTEWVGPKRGSIEVDVDAILSS* # PASA_UPDATE: g11996.t1, single gene model update, valid-1, status:[pasa:asmbl_6696,status:12],[pasa:asmbl_6708,status:12], valid-1 NODE_38_length_54889_cov_42.3193 . gene 43339 49231 . - . ID=g11996;Name=g11996.t1 NODE_38_length_54889_cov_42.3193 . mRNA 43339 49231 . - . ID=g11996.t1;Parent=g11996;Name=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 49027 49231 . - . ID=g11996.t1.exon1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 49027 49231 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 47985 48943 . - . ID=g11996.t1.exon2;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 47985 48943 . - 2 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 47544 47864 . - . ID=g11996.t1.exon3;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 47544 47864 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 46919 47416 . - . ID=g11996.t1.exon4;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 46919 47416 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 46067 46459 . - . ID=g11996.t1.exon5;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 46067 46459 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 45643 45981 . - . ID=g11996.t1.exon6;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 45643 45981 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 45357 45522 . - . ID=g11996.t1.exon7;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 45357 45522 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 44620 45260 . - . ID=g11996.t1.exon8;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 44620 45260 . - 2 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 43969 44517 . - . ID=g11996.t1.exon9;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 43969 44517 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . exon 43339 43854 . - . ID=g11996.t1.exon10;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . CDS 43426 43854 . - 0 ID=cds.g11996.t1;Parent=g11996.t1 NODE_38_length_54889_cov_42.3193 . three_prime_UTR 43339 43425 . - . ID=g11996.t1.utr3p1;Parent=g11996.t1 #PROT g11996.t1 g11996 MRAHLRCGDTVHPLDGHVTPIGRGDACSVILRSRSVEPQHATIEYAERDGSGTYVLRDMNTTNGTFVNELRVQRDSIITLKHGDTIRFGYDSSTYRFEETQEESRPMSSLASDSQRTAELRRRQQQQNYAATHTPRQDDHPVASILPPIPTASFAGDQAGGGDALRVLEQRLRQLEAVAQRGPDADGPAVGDAWGVRSHDNYGGSRSPVSSSRPQTAKRPTHGRQRRQWTKASPGGASVDDPISIADVYGSAAVGAVEALEAELEARVEELRDRDGRIASLSAELRRREHAVITLQQRERSMDEQLGEVRSEMAERESLIAALREDIARFRSAAGGAAPDVAIAEFKKDLEVLTGERDSLRARAEAVEGAKAAMEAELIARAERAEGEIASTNKSLAQLVESDGSDPMLAVHLAFERNGAQLKDVTRKLEEVTRKLEEERTRTADASNKVEALATERAAYAKQLGEAQHSLEKVAKDMEAAVARLEVERDDARKKYDGFCRDLSSVFGVQLDPSAAEASEALTRAAGSLVSTLKGQKVALDTVARERDEQASLRSQAAADTKAARDTISELQQRVRKLEVAEHDALQRAETMAALEKDIDYMQEEARREKERLKSEIKEAIDAAKAKASADSSEMEALRVRLVAAEEGLAVRPQFVELKQKYDALCLELAAALQLSQPQQQEGTPLADADADALAVTVVARVDHVIREQFRLDEIVQEVNGDLAKREEEVRRLADALTAAQQEVSSAASTVATELDDVRKRLEIKSSAAAELEEQLDTALDANRDLERQRDASVEFGIRIGTLVGIAVADTPPEEFKDKVVEGINVLVDERLLMREKLRETEEKLSMIAGSSDGADGHSVAQKQHIITQLRKELDRKSARVGKLEGEVKAALSTRDQLVASLTKTHADFCRSLGSLIDVDSRPAGGAPNPSISSIEERILKRVHRLVRHEKKSATQDDAAGGAVGLSDEGAAPEARTAGVLQSVEQMLGDLKGGHAMKDAEIERLSEIVDALTQQLATARGAGHTHTQPASPSKQRRVRPQSAPVSRKSPASSATKSVRKRTSSSRGGSDAEEGLKDAVAERDATIDELMRELKSAKARLTDVRADLSDEQKARVVELERAVAQHVSENGRLSEERQRADADHQQQTEELERRLRAALDGTQELSGKVEKASKKLGEFRRTVLRLVGLELEPNADDARIFAKVEKFAKERVQLKQDRETLRRERETLQGHVTELKDQIKLATFESTAQHEREKQRLESELRRARQAASRFQKQAVAAEQESSLKPPPAVEELQRKSIELGTVQAKSEARRQKIIQLKNALRTLQEDYSVKDEMLLEARGRIDELERSVGRLKVYETKYVKFCKKIGRLIDSNIAGIAAAAPNQPTRPSSASGGAAGDAIVEKLMRVIREGREASASTSSSHAGASPARPSSAHGRIRTGPTGLRPVTPGGEPQQDISDFSLSGRAVGGGDYGAPRAKHDDFPERREVTFADVTTDPEDD* # PASA_UPDATE: g3605.t1, single gene model update, valid-1, status:[pasa:asmbl_7258,status:12], valid-1 NODE_4370_length_1725_cov_29.0685 . gene 197 1497 . - . ID=g3605;Name=g3605.t1 NODE_4370_length_1725_cov_29.0685 . mRNA 197 1497 . - . ID=g3605.t1;Parent=g3605;Name=g3605.t1 NODE_4370_length_1725_cov_29.0685 . exon 1129 1497 . - . ID=g3605.t1.exon1;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . CDS 1129 1497 . - 0 ID=cds.g3605.t1;Parent=g3605.t1;5_prime_partial=true NODE_4370_length_1725_cov_29.0685 . exon 837 1007 . - . ID=g3605.t1.exon2;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . CDS 837 1007 . - 0 ID=cds.g3605.t1;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . exon 573 680 . - . ID=g3605.t1.exon3;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . CDS 573 680 . - 0 ID=cds.g3605.t1;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . exon 197 373 . - . ID=g3605.t1.exon4;Parent=g3605.t1 NODE_4370_length_1725_cov_29.0685 . CDS 197 373 . - 0 ID=cds.g3605.t1;Parent=g3605.t1;3_prime_partial=true #PROT g3605.t1 g3605 TLRADFDQERQTQRRTIGDLDALNASLLAACEQHKREIGERQKAVDSLRSQSADGAATTLGLQLQLHDANETLEAVRKQAADQRQINQNLLGDIQRLKTEARMAEEQQTVYREFRSRVTGEIQELEDKCKRTENARRLLEIQLEEARARMKEATELARSREVDIMVERQWRESVQSDLEKETKHHKQLETDWFSERASLESQLSKLAGEKAAHEEKLRVLDTTVVDLGVALSKNVVHLDDLKRFKEESAGKLWETDENAVDCRRCAQPFSLTRRK # ORIGINAL: g13813.t1 original gene structure, not modified by PASA NODE_519_length_21926_cov_40.5328 AUGUSTUS gene 17694 21708 . + . ID=g13813;Name=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS mRNA 17694 21708 . + . ID=g13813.t1;Parent=g13813;Name=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 17694 17825 . + . ID=g13813.t1.exon1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 17694 17825 . + 0 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 18085 18237 . + . ID=g13813.t1.exon2;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 18085 18237 . + 0 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 18389 19025 . + . ID=g13813.t1.exon3;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 18389 19025 . + 0 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 19228 19438 . + . ID=g13813.t1.exon4;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 19228 19438 . + 2 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 19730 19969 . + . ID=g13813.t1.exon5;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 19730 19969 . + 1 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 20296 20383 . + . ID=g13813.t1.exon6;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 20296 20383 . + 1 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 20649 20902 . + . ID=g13813.t1.exon7;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 20649 20902 . + 0 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 21055 21086 . + . ID=g13813.t1.exon8;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 21055 21086 . + 1 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 21313 21353 . + . ID=g13813.t1.exon9;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 21313 21353 . + 2 ID=cds.g13813.t1;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 21517 21708 . + . ID=g13813.t1.exon10;Parent=g13813.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 21517 21708 . + 0 ID=cds.g13813.t1;Parent=g13813.t1 #PROT g13813.t1 g13813 MLRYCPPDDPFVPVWHDGGASRCILFTVNAGVVAALATVLVVLMFRPLSKMGRKTHHDKRAKVYNVHVTSTVVFATAALTDMLVDFGMESLYAYEVVWSLLVVYAWTMAGNAIRGSRILHIVPVLWLLWLAQVVTTAIEFASLRSDEYTFGTPLGNGRFALLVVRAVSVSVATFTGVVLTRDLGAFNRKTTDGYSRLRQSDADTRARMSINADPDEEAGTFQTAAAASEGKAGGKKGKSVGDEDDGDDDDETQELEKEGKEGARGFLRKVRILWPYLWPHGNRALQFKVILCFALLGAGRAVNIFVPLTYKRVVDHLTGDSVSFAPGLIAAYVGLIFLQGGNIGSTGALNSFRSYLWIGVSQFTVRTMQVKLFDHLQSLSLRWHLSRKTGEVLRVMDRGTSSIDTLLSTLLFNILPTFADIGVAIIFFVLAFDLWFASIVMTTMVLYIYSTIAITDWRTKFRRDMNALDNLSRQKAVDSLLNFETVQYYDGKNFEVNRFENTIKQYQEKEWQANASLNFLNATQNVIIIAGLTGGAFLCAYRVSEGQMSVGNFVLFVSYIGQLYAPLNWFGTYYRTIQQYFIDLENLLELLDIEAEVRDRLGAPDLNVTEGQIEFRDVHFHYDLKKPVLRGISFVVPPGKTYALVGTSGGGKRCVDPWA* # ORIGINAL: g13812.t1 original gene structure, not modified by PASA NODE_519_length_21926_cov_40.5328 AUGUSTUS gene 14659 16727 . + . ID=g13812;Name=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS mRNA 14659 16727 . + . ID=g13812.t1;Parent=g13812;Name=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 14659 14683 . + . ID=g13812.t1.exon1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 14659 14683 . + 0 ID=cds.g13812.t1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 15029 15105 . + . ID=g13812.t1.exon2;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 15029 15105 . + 2 ID=cds.g13812.t1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 15262 15410 . + . ID=g13812.t1.exon3;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 15262 15410 . + 0 ID=cds.g13812.t1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 15581 15734 . + . ID=g13812.t1.exon4;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 15581 15734 . + 1 ID=cds.g13812.t1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 16253 16378 . + . ID=g13812.t1.exon5;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 16253 16378 . + 0 ID=cds.g13812.t1;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 16620 16727 . + . ID=g13812.t1.exon6;Parent=g13812.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 16620 16727 . + 0 ID=cds.g13812.t1;Parent=g13812.t1 #PROT g13812.t1 g13812 MSQLCIITVATIQADLGDIDSLPSRLDAVFAKDSLFYSQSWSLITLVNNAATTGNLSAHVKDYSDVAEIRNYMDTNVTSVVALTSRFVRECRARSPCTIVNVSSLMAVMPFAGWGLYCTGKAARDMLHSVVSVEEKQHAVKVLNYAPGPLDTDMQRLARETLVDEEQRRAFEAMHNEGRLLTADESASVLVRLLVEGSFESGKHIDYYDVQK* # ORIGINAL: g13811.t1 original gene structure, not modified by PASA NODE_519_length_21926_cov_40.5328 AUGUSTUS gene 12220 13845 . + . ID=g13811;Name=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS mRNA 12220 13845 . + . ID=g13811.t1;Parent=g13811;Name=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 12220 12404 . + . ID=g13811.t1.exon1;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 12220 12404 . + 0 ID=cds.g13811.t1;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 12536 12701 . + . ID=g13811.t1.exon2;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 12536 12701 . + 1 ID=cds.g13811.t1;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 12857 13033 . + . ID=g13811.t1.exon3;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 12857 13033 . + 0 ID=cds.g13811.t1;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 13201 13845 . + . ID=g13811.t1.exon4;Parent=g13811.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 13201 13845 . + 0 ID=cds.g13811.t1;Parent=g13811.t1 #PROT g13811.t1 g13811 MAMSGVIAGVVQATCSAMHWDVGEAWVPSQQGSPVFNRTYMHAERDGAVDSHGDGLTSDAMRAVCLDMCARACNEGVPIFGQDGLKPSVIETTAAVPVRVDESVIAVLVFLSIGQVEKSQATIDFLRCIGNVAERAIALSSVADAGDKHDGFKVPAAPEETASSSLSWEDDATVPMAEAMLDAVLHTNDGPQGVDFSYGALVASRPGLHRSIRRARMASAHSGKSVSRQESFSTVVRRLQLLSRRGSSVSFTSNASSTPSTFEELSLCYSTHNDSNEDENDSLDSISVSMRSVSENVGAASPTGAVNGEDMPLRTCHAINRSASVPAQLKPFGKVSDLHLNASVPCARPPGTSNVAPLLSRPSYGSFVATARGKTRAERRASLLAHLQSR* # ORIGINAL: g13810.t1 original gene structure, not modified by PASA NODE_519_length_21926_cov_40.5328 AUGUSTUS gene 6948 11221 . - . ID=g13810;Name=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS mRNA 6948 11221 . - . ID=g13810.t1;Parent=g13810;Name=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 10403 11221 . - . ID=g13810.t1.exon1;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 10403 11221 . - 0 ID=cds.g13810.t1;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 10143 10289 . - . ID=g13810.t1.exon2;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 10143 10289 . - 0 ID=cds.g13810.t1;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 9845 9907 . - . ID=g13810.t1.exon3;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 9845 9907 . - 0 ID=cds.g13810.t1;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 9433 9632 . - . ID=g13810.t1.exon4;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 9433 9632 . - 0 ID=cds.g13810.t1;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 6948 9204 . - . ID=g13810.t1.exon5;Parent=g13810.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 6948 9204 . - 1 ID=cds.g13810.t1;Parent=g13810.t1 #PROT g13810.t1 g13810 MGPPTEGKQASAGNMTEVVAWSNFGVKKAQTLSENSSTEVSAWGDFEKSTGKAQKTLSEDGGDEIKAWMGFADNSNLQKSLDHAVDGQPSELGRTSIHQIATVTEDEEGEEGESQQRERVATATVTRGRKSVLTTAAIHKSLSVPKVTGIRPPSRQSRQASEDGEGTLDGIPSEFHFETIPDEPALKRRRRRFMWILSEMSGTMPNAARFVERFPPLEFVDSCLRGVGQVFFMNNPISGIFFLVAVFYYSFLCGLAAIIGVVSSTGISYLIGLNHGSIRSGLFGFNGTLVAIGLITFQNPGAENWDNPLVFIPMVLLSALSSLFFVMAGNILVRHFGLATFTLPFHMCTWLWILGSQQYAYFPNRSLWVPEPNKITTSSDMHPLSYETEKLARTIGVNIAQVFFLENDISGYIMVAGVFVCSRISAVMTVYGSAIALVTAVAIGAPQATIYAGLWGFNAVLVSIAIGGMFYVMSIRVAALATVATMVAVLLFGALSSAFHVFGIPTLTFPGAVVALGFCLLAGAVPGAVPVELDRMTVPEDHWRRFRLSESVLSRFSVVRAVARRTALDSGLLERFLVPVLMCWGARGGDVKVLENLISLGADPSCADYDGRTPLHIAAAEGKMAAVSLLLDSGAECDAIDRYGYRPLDDALAAKDQQATVIAALRRNAATVNASRERQACEMCAHAFKGRTETIALCLRAGYGASNADYDGRTALHLAACEGNANTVMTLVAYGADLRATDRYNNTPADDARLHGHGKLASWLERRMKGPDGKGSPSEDDHDRVIINIEDPDAVSVAATDRKDRKRSAAVDPGDFGSIRGNAAMVAELASALLTPDVASTPEAQGLLPVLLCAASSSGDDMLVRQLCEAGIDPSVADYDGQTGLHLAAAAGHGDVIDTLLSLGAHVNAQNRWRQTPLDVAVRCARDAAISLLVSRGSSLGLDHMDVAGELCRAASRNEIRALKRWVAAGARANVADYDGRTALHVAASKGHLEIVKFLVACGADPAAKDRWGRPPLSDAKDGLHLDVISFLAQAQEQWQEAQDMQRKAKMRAIRRTSQQNLNNIGKSKVAPSKSVGVGAGAGVGSGTGTPVGGSPPVGASSASGASSVASSASGSDGSAGPSTALNVQVVRVQNAGDDSASPSRSKKKKVAVGTGKGKKK* # ORIGINAL: g13809.t1 original gene structure, not modified by PASA NODE_519_length_21926_cov_40.5328 AUGUSTUS gene 94 5453 . - . ID=g13809;Name=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS mRNA 94 5453 . - . ID=g13809.t1;Parent=g13809;Name=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 4848 5453 . - . ID=g13809.t1.exon1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 4848 5453 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 4527 4697 . - . ID=g13809.t1.exon2;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 4527 4697 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 4154 4226 . - . ID=g13809.t1.exon3;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 4154 4226 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 3685 3832 . - . ID=g13809.t1.exon4;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 3685 3832 . - 2 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 3394 3510 . - . ID=g13809.t1.exon5;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 3394 3510 . - 1 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 3103 3191 . - . ID=g13809.t1.exon6;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 3103 3191 . - 1 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 2891 2970 . - . ID=g13809.t1.exon7;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 2891 2970 . - 2 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 2567 2698 . - . ID=g13809.t1.exon8;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 2567 2698 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 2195 2344 . - . ID=g13809.t1.exon9;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 2195 2344 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 2018 2054 . - . ID=g13809.t1.exon10;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 2018 2054 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 1468 1717 . - . ID=g13809.t1.exon11;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 1468 1717 . - 2 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 1075 1196 . - . ID=g13809.t1.exon12;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 1075 1196 . - 1 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 804 826 . - . ID=g13809.t1.exon13;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 804 826 . - 2 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 436 565 . - . ID=g13809.t1.exon14;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 436 565 . - 0 ID=cds.g13809.t1;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS exon 94 239 . - . ID=g13809.t1.exon15;Parent=g13809.t1 NODE_519_length_21926_cov_40.5328 AUGUSTUS CDS 94 239 . - 2 ID=cds.g13809.t1;Parent=g13809.t1 #PROT g13809.t1 g13809 MSNDEEDANAKGTRSASRASQRDEETKSSRGSAKSRRRKEKSEADVSSKRSDRKDVAEEGQPIEDVPKERESHSSHGRRKKDKNDGEEHEMREGGGADSARGSRKKSPRSRKEEEGNEDATCVEVEADGYVEVPDFVLTYLKNDKKNAQLRENFQWRLKRSGVRIVHEEDIDGEHVHASLFVSFGRLSKVAEKINLQMPLDGADIAPSHHRDCLGIMERLRTDNEIDFVSANYMSKKMHLFKGHENRETFFRPALRNLLTFSLLLETDCSNPNEETEDKISTKGLKFLLMEEAYVAAFPVHNPPAPDGSDEKSMLIGLWAKRRIAFQPLWRIRNYFGEELGIYFAWIGYLVQSLLLPAIFGVIVLLYGIYNSRHAVGFYPRMQKTFDNDLTGPFAILMCLWGTLFLEFWKRKSATLVYNWDTDSFAQEEPDRPEFVGTHARPDPVTGTPSRYFPFRAQVIRYTQSLVLLVTMILLVVASVTAVIIFRVVGETEWAPRSKYGPTVFSIIPSILNAISIIILGSVYKRLATWLTDRENHRTQSAYDNSLIMKRFAFEFVNANASLYYIAFFRNQRTIANNTKWVDSCGEKQTCLSVLTVQIITLLCTKPLMKQVKDILIPKLRLWWQRRRGRVEPLATGVSREFRLQPIDEYSMEEFLEKVILYGYVNIFAVAFPLAPIFVIFWGLIDIRTDAYRLLETCRRPVGMRADGIGMWYKILEFLNAVAVVTNGLLLTFSSTLGTEIANRYGSHTNLLILVVFE # ORIGINAL: g3577.t1 original gene structure, not modified by PASA NODE_4012_length_2349_cov_37.5488 AUGUSTUS gene 81 1052 . + . ID=g3577;Name=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS mRNA 81 1052 . + . ID=g3577.t1;Parent=g3577;Name=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS exon 81 212 . + . ID=g3577.t1.exon1;Parent=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS CDS 81 212 . + 0 ID=cds.g3577.t1;Parent=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS exon 388 699 . + . ID=g3577.t1.exon2;Parent=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS CDS 388 699 . + 0 ID=cds.g3577.t1;Parent=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS exon 900 1052 . + . ID=g3577.t1.exon3;Parent=g3577.t1 NODE_4012_length_2349_cov_37.5488 AUGUSTUS CDS 900 1052 . + 0 ID=cds.g3577.t1;Parent=g3577.t1 #PROT g3577.t1 g3577 SYDDEMRELDETAEKIKEKKAFIVQESRDKKGKNRPTMPRKTVKVTRSEFHESMAEVGLDTEHGPSDAHYLRGRSRSVVARKRKRDESAADVDAMEIDGEGDAAAAASSKKAKRSASASLARTRSASAGAHRSKSQQPRDVSGLRDDGQIANAENIKRKAQRAPNMDARASESDRKIQTKMPKHLFAGKRKGGKTTRR* # ORIGINAL: g2962.t1 original gene structure, not modified by PASA NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS gene 338 836 . - . ID=g2962;Name=g2962.t1 NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS mRNA 338 836 . - . ID=g2962.t1;Parent=g2962;Name=g2962.t1 NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS exon 733 836 . - . ID=g2962.t1.exon1;Parent=g2962.t1 NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS CDS 733 836 . - 0 ID=cds.g2962.t1;Parent=g2962.t1 NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS exon 338 476 . - . ID=g2962.t1.exon2;Parent=g2962.t1 NODE_5042_length_1058_cov_29.6521_potentialcontaminant AUGUSTUS CDS 338 476 . - 1 ID=cds.g2962.t1;Parent=g2962.t1 #PROT g2962.t1 g2962 MIFTKKRTIAAQVKRHRNVIAGTEVEVGEKIGSGGFGNVYKGTWRGTVVAVKRINIGEIIESSEKSMPSYVKWVQGLRVT* # PASA_UPDATE: g3210.t1, single gene model update, valid-1, status:[pasa:asmbl_3759,status:12], valid-1 NODE_2206_length_7268_cov_39.7377 . gene 114 5865 . + . ID=g3210;Name=g3210.t1 NODE_2206_length_7268_cov_39.7377 . mRNA 114 5865 . + . ID=g3210.t1;Parent=g3210;Name=g3210.t1 NODE_2206_length_7268_cov_39.7377 . five_prime_UTR 114 115 . + . ID=g3210.t1.utr5p1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 114 243 . + . ID=g3210.t1.exon1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 116 243 . + 0 ID=cds.g3210.t1;Parent=g3210.t1;5_prime_partial=true NODE_2206_length_7268_cov_39.7377 . exon 654 727 . + . ID=g3210.t1.exon2;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 654 727 . + 1 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 1064 1146 . + . ID=g3210.t1.exon3;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 1064 1146 . + 2 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 1412 1492 . + . ID=g3210.t1.exon4;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 1412 1492 . + 0 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 1679 1778 . + . ID=g3210.t1.exon5;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 1679 1778 . + 0 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 1942 2037 . + . ID=g3210.t1.exon6;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 1942 2037 . + 2 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 2288 2379 . + . ID=g3210.t1.exon7;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 2288 2379 . + 2 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 2684 2863 . + . ID=g3210.t1.exon8;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 2684 2863 . + 0 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 3078 3328 . + . ID=g3210.t1.exon9;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 3078 3328 . + 0 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 3517 3685 . + . ID=g3210.t1.exon10;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 3517 3685 . + 1 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 3848 3929 . + . ID=g3210.t1.exon11;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 3848 3929 . + 0 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 4179 4340 . + . ID=g3210.t1.exon12;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 4179 4340 . + 2 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 4745 4850 . + . ID=g3210.t1.exon13;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 4745 4850 . + 2 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . exon 5062 5865 . + . ID=g3210.t1.exon14;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . CDS 5062 5212 . + 1 ID=cds.g3210.t1;Parent=g3210.t1 NODE_2206_length_7268_cov_39.7377 . three_prime_UTR 5213 5865 . + . ID=g3210.t1.utr3p1;Parent=g3210.t1 #PROT g3210.t1 g3210 VQRGASGIVLPVSNDADLFFLLNEANGDAHDFVALVDPTYLNSSILTTLESTDNVHGILIGTGNRPSAFSPAASCPNCNTQLYKGDTTPVAWNPYANNLGNVILHSPIFLIGSEQTASLKQLAMQNRAANSFPAWAVQMSAFMNGARDSTTCLRRGFCDTIGGHSPWAMAKISTPGEQYILASAELDALGFFRSLSYGGNADVTGFVTLMAAAQAIGQIVKQNVTLEKNIMFALFDGESFNNLGSANTAWAMLQGTFPSNYPDSIPLSAVASIVHVSQIGLRGDPSNPTPLYYHTDRTEYVPAGVSSIVTALQASAADAGVTLSSVAGNQGLPPASAQSFLQLNRTIPAVVVADHAQAYTNKYYGSMYDDATNVNISNPAVINNLCKAATTIARTLFRLASSNTTALSSSLLNANCTYLEQVLNCFLTNFTCQPIMDATGYSPKSLQSGPASRYPSVYSSGAIQLYQFASFSLLASSLGTRVNLTEDECKGYVYFYTSPNCYIVSGDYQPAPNLPSTATPFADTNGQVPLWTESRWDGNPSYRVFLVNKRVVDIGTFLAGIAVLVLSFGTVYGFRSYVQKAKLP* # PASA_UPDATE: g7293.t1, single gene model update, valid-1, status:[pasa:asmbl_8498,status:12],[pasa:asmbl_8502,status:12],[pasa:asmbl_8503,status:12], valid-1 NODE_616_length_20114_cov_41.0304 . gene 11317 19767 . - . ID=g7293;Name=g7293.t1 NODE_616_length_20114_cov_41.0304 . mRNA 11317 19767 . - . ID=g7293.t1;Parent=g7293;Name=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 19582 19767 . - . ID=g7293.t1.exon1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 19582 19767 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 18862 19119 . - . ID=g7293.t1.exon2;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 18862 19119 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 18537 18644 . - . ID=g7293.t1.exon3;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 18537 18644 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 18266 18370 . - . ID=g7293.t1.exon4;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 18266 18370 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 13361 18007 . - . ID=g7293.t1.exon5;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 13361 18007 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 11941 13095 . - . ID=g7293.t1.exon6;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 11941 13095 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . exon 11317 11738 . - . ID=g7293.t1.exon7;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . CDS 11625 11738 . - 0 ID=cds.g7293.t1;Parent=g7293.t1 NODE_616_length_20114_cov_41.0304 . three_prime_UTR 11317 11624 . - . ID=g7293.t1.utr3p1;Parent=g7293.t1 #PROT g7293.t1 g7293 MVDEERRLTLEKRKQERLERQRQLDEELKKEEAAREAARAKREADRKARLEQSKAEADKAQKELDEKRAERAKQREEAARAVSTDTATTTARTRTISGASDASATSQRRTSTSSPAPSGLKKRDSVSKIADVAPKRTAPAAAAASADKVDDEDAERAKRRQEREKQAEERRKKLEEEEREFEEKQKQRRKEREERAARMKKELEDEEKRLADERQKRLESKKAAASTASSADKPPTPSSEKTEAAAPAERRSSIARSTTLTRRDSVSSEKSTPTTTTARATGLARRESVTSSTDAKSSLSRRDSTAGESKIPATRRPSAVDVTARSRTSSTSSDVSRVGKSSTVSEGKPPRVSESPAAGRRDSASTPGSASKPPLGRRTSSASGSTTSLNKEPVSSTAAKTTTTTRRESSAGSTGIPMQRKPSVSDGMPQKSIVGVRRPSQSDNKSTLTSRLSIAKSATVTDKAEESEESIAMRAMEDAEKEKQRRKAVQEAAAAAAAAELAAYEAEEAERRKIEEEEERVRREEEERKRKEDEERARVEEEERRVKEEEERARREEEERIRLEAEAELKRKEDEERARVEEEERKIREVEAEQKRKEEEERARIAEEEKKKRDEEERVRLEAEAELKRKEEELARAAEELRKQEEEEERARLEAEAELKRKEEEEKEKERARIAEEERIKKEEVEKKKKEEEEHARVAAEEENKKKAEKERLRLEAEEAAEKARAEEAERMRLAAEEERKKKEEEEERTRLEAEAAAEKKKKEEEERERVAAEEKKAEEERARLAAAEEQKKKDEEERLRVEAEAELKRKEEEEKEKERARVAEEERTKKEEEEKKKEDDDDGVAEEGLEAAVVAGASGSAAANAWDATTQKPVEAALTNDEVAKSVPAVVSWRDVEAQMREVVDADVTLSDSDRERWVFVEAAMAEEAALPPHQAKWAHAPAPKETDAAAPAKAQREVEEKAALEKAKEEEEKAALAKAKEEEEKAALAKAKEEEEKAALAKAKEEEQKASLAKAKEEEEAALARAKEEEVRAAQSQKNETAVERRRREAEEEAKKEEEAREARRKIREEERKRREEQEAEEDRKREEEKKKRREDAERRKRELEEEEVKEKEAAEERRRNREEEQRRKKEEQEESERKEKEKREEDRRKKKEEQEAAEKREKEAEAHREEERRAAASKKEQETKAPSTPVVVVADDDEEMWRKAEEELKAKGGDEDLLELLDGAGGVSDVEGEGDEDDEEMWKRAEEEMKANGGADVLALLGDDEGPKAKASSPSPAKAAVEPAVKLTVASPPSKPAAVVASSPKERPKSMFVSSSTANDSASSISDMVLDTDGKKLTHLTLSRAALKPQRNKRATMNPVRALQAMQGVSDQYDTTSDKAPASPSAAAQEAEAADSPSALPATASPRMGLRLPMPGMAGGALSPSTLKSRPHSIAVDTPTIIEPKKTFKPPAGAGGAAGLLAQIGTLAAKDGAAQLRPTSPGALKRNAGGAKDISLFKIKGKKKVRVVEVELAVGSLNHGDVFVLDLSDAIIVWNGADSTRIKRAKGFDVAIRMRDKQYSGRIQVTTLEDGKDDDAGKGPASRFWETLGGTSKGVVDTAAGGDDADFEKTCDDASRVYRILDDGTVGEVASSGRDMQSSLLSTDSAFVIDTLSEVYSWAGRKSSDAARNAAIAYAEGIIATPPAGFTRPSFTKAIRTGENQERIALKEKFTDWTDGMSIEVRQVGNVQRKEQTPYQTGADLAKRENIDVAAMVSYELPRPKWHENIVKDDGSGAVRIWQCADKDKTEIPETRHGQFYSGESYVVLYKIAEKRDQYILYFWQGRDSRLNEQGAAAMLAIELDKQYGAPQVRVVQGKEPDHFLSVFKRRFVVHLGTPDSPRPADALYHVRGLTQASTRTIQCSDTTMRALASNGCFVVATSDTAYAWIGMGSAPFEATAAKDILGVIAPGKTHVTVKEGEESPQFFRAVGGRKPYANGDSLRETTSAKGHHMRVFHLYRSHTAGPQFDEVAPCALQSDLKPEAAYVVDAGNELYLWVGSACDQDDVRLGMLTLSDYSQQLEKGGRKIAETLVVQSGQETPAFRSHFTAWDESIGKKLAAEVTGKPVRKSALMAPTALEDAMKQYSRKIFPLSELKGVALADLPPGVDPKKLEEHISDEDFVPLFQMSREEFNKFPPWRQIEFRKKVGLF* # ORIGINAL: g7291.t1 original gene structure, not modified by PASA NODE_616_length_20114_cov_41.0304 AUGUSTUS gene 8186 9296 . + . ID=g7291;Name=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS mRNA 8186 9296 . + . ID=g7291.t1;Parent=g7291;Name=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS exon 8186 8265 . + . ID=g7291.t1.exon1;Parent=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS CDS 8186 8265 . + 0 ID=cds.g7291.t1;Parent=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS exon 8520 8662 . + . ID=g7291.t1.exon2;Parent=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS CDS 8520 8662 . + 1 ID=cds.g7291.t1;Parent=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS exon 8782 9296 . + . ID=g7291.t1.exon3;Parent=g7291.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS CDS 8782 9296 . + 2 ID=cds.g7291.t1;Parent=g7291.t1 #PROT g7291.t1 g7291 MTRVPGPRKSVFGELSVVATDAHRIECGAAFVAIAIIAVLMSKKETPPDVTPASRSEGDAASSHVGPMSNIFLLGGSVYDFASLEKAYAGEDVFVSALTSDEKPHDTCSASTKNVLNLMEAKGVRFYSVIGGAGTDAEVRARQSWFESALTSTILLLFKASAADRVLEYKMLTDAQAAHPDWHLRSLSPPFLTNGPRTGKYANDPTKPGIKLWSTISRADLADFMLKVMNKPRTEPRVAEYIYYP* # ORIGINAL: g7292.t1 original gene structure, not modified by PASA NODE_616_length_20114_cov_41.0304 AUGUSTUS gene 9673 11058 . + . ID=g7292;Name=g7292.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS mRNA 9673 11058 . + . ID=g7292.t1;Parent=g7292;Name=g7292.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS exon 9673 11058 . + . ID=g7292.t1.exon1;Parent=g7292.t1 NODE_616_length_20114_cov_41.0304 AUGUSTUS CDS 9673 11058 . + 0 ID=cds.g7292.t1;Parent=g7292.t1 #PROT g7292.t1 g7292 MECRAPTPTPKRLSITKPSTGGTVLPPDYEVGLIGMGDMGQLYATVFAEAGLTVNACDLPEKAAELTMKYAHLPRVRILQDGFAVSRRSDFVIYSVEAVNVERVVRLYAPATKVGAIVSGQTSVKAPEIAAFEKYLPPDAHVVTCHSLHSAGVSPKGQILVVIPHKCTDEAYRRAMAVYSLFGSHLVEMSAEDHDRITANTQSLTHVGFQAMGTAWKNAGFYPWEHASYVGGIDNIKILCCLRIYGAKWHVYAGLSIMNPLAKAHVRQYARSVSALFKMMIQEDRDAFFERVQTAGRAVFGDERTGAGVPCKPEGLLLPDDVLEEYGLGSLPVRDRKPNSHLSLLAMVDCWHQLQIRPYEHLICQTPIFRLRLGIAEYLFNDRVLLEETLNAALYNKKIRADDMEFYASVREWATIIVHGDLDGYRAQFEEAAAFFESRLEDARKASATLISRLSALQPSS* # PASA_UPDATE: g7290.t1, single gene model update, valid-1, status:[pasa:asmbl_8497,status:12], valid-1 NODE_616_length_20114_cov_41.0304 . gene 1 6222 . - . ID=g7290;Name=g7290.t1 NODE_616_length_20114_cov_41.0304 . mRNA 1 6222 . - . ID=g7290.t1;Parent=g7290;Name=g7290.t1 NODE_616_length_20114_cov_41.0304 . five_prime_UTR 6135 6222 . - . ID=g7290.t1.utr5p1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 6062 6222 . - . ID=g7290.t1.exon1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 6062 6134 . - 0 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 5592 5749 . - . ID=g7290.t1.exon2;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 5592 5749 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 5022 5481 . - . ID=g7290.t1.exon3;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 5022 5481 . - 0 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 4598 4698 . - . ID=g7290.t1.exon4;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 4598 4698 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 3870 4392 . - . ID=g7290.t1.exon5;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 3870 4392 . - 0 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 3622 3735 . - . ID=g7290.t1.exon6;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 3622 3735 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 3071 3253 . - . ID=g7290.t1.exon7;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 3071 3253 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 2792 2983 . - . ID=g7290.t1.exon8;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 2792 2983 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 2488 2643 . - . ID=g7290.t1.exon9;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 2488 2643 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 1955 2113 . - . ID=g7290.t1.exon10;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 1955 2113 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 1437 1595 . - . ID=g7290.t1.exon11;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 1437 1595 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 1113 1247 . - . ID=g7290.t1.exon12;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 1113 1247 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 684 824 . - . ID=g7290.t1.exon13;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 684 824 . - 2 ID=cds.g7290.t1;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . exon 1 195 . - . ID=g7290.t1.exon14;Parent=g7290.t1 NODE_616_length_20114_cov_41.0304 . CDS 1 195 . - 2 ID=cds.g7290.t1;Parent=g7290.t1;3_prime_partial=true #PROT g7290.t1 g7290 MMSITYKCPRRLCVLTPRSRELPHVVFALIGLYSIAIGCVLFQTQGADGQQLFRQFMNVTNWPTNWAAGDFDGDTFTWNLTGSSARSYFTTTTAILNPRNVIVMEPALVPRDSMFQLTIVMATDTDALIPSQVSFKEQVSMFASSNSVNASAQTADSVSVLGQAFHKIRLVGRGSRTITMSVDPECYMKRGDTAVNLIASFQHLNIPPATRNLRNGWVQVNTITATLVDKVIVGNWSAVECFMTPSASLPSGWIAVDKDGDSSTWTVDVTSGRAVSYSYADTTQLLGYFIDGDNWLISPLIVVEGAGTRIRFNLQSDSDASFPDTVEVLVSPSGGTTPAAFTRTLSNNTVGITGWSTGQTVPSFESRIPDDLVGQSVRIAFRHRTSVDGLAVYVDNVKVGTRFWCRPNPCKNNGTCVDGADSASCTCLAGFSGVTCDTNIDDCTPNPCRNGGICADLVNGYTCTCPKGYSDTNCSTANSPLATRDLLHAVGRNDFSAMGVGQNRTFSTSTPAAVLGALRRIPLRSIAASVCASVACDVYGNTYIWGTLSCDTINNGDKNASELVTNMNRRAGAQAIPAGQFLKDEAITTVDTGRDTYFFRSGNGSVFAMGVMQYVLPGVSIGDAYGTAPMRAFLDSSQYSVAKAANFHAVYLNVSGLYVTGTDSNRDGFLCMGSAAATVKLARITFPASDAVVGASLSLSATYTWTANGTVYVCGLNDMGQLGIAELGKISTPTVLRGAIANKTVVDVRASDNHGVALDALGRVYVWGSSRIIKNTEPTLVEEALATKFVVAIATSGLQVYAVTDNGEVYYWGHRSGLSFVTLSPQLLSGVDATRRVTMVTASPVMALIYYDHMENEVAFALQLGSTVDEGADNATVIVSRASASNLSTSVSARVTISPRSQSTQGLDFNFAETNL # ORIGINAL: g7392.t1 original gene structure, not modified by PASA NODE_1392_length_11628_cov_38.0945 AUGUSTUS gene 123 1948 . - . ID=g7392;Name=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS mRNA 123 1948 . - . ID=g7392.t1;Parent=g7392;Name=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 1598 1948 . - . ID=g7392.t1.exon1;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 1598 1948 . - 0 ID=cds.g7392.t1;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 960 1079 . - . ID=g7392.t1.exon2;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 960 1079 . - 0 ID=cds.g7392.t1;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 432 746 . - . ID=g7392.t1.exon3;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 432 746 . - 0 ID=cds.g7392.t1;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 123 303 . - . ID=g7392.t1.exon4;Parent=g7392.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 123 303 . - 0 ID=cds.g7392.t1;Parent=g7392.t1 #PROT g7392.t1 g7392 MVPIGVVKIRCAIEGHGVSNHHMKLSGTVTAVELLDVIMHRLGHSDLIADHVVSFSASDGGLSVPMPDATRPLVARMLLNMPDKALSDSVMFEIRKRLVPLSKSVSPKAVRRRSGEEVLLKDGYLNMKSMIIGQDKSWSVRYFKLTENYIAYYKSAKAMEPVEAFPLSMITEVEYVADDVFGRANCFRIAVPSYVFLMAMDESTRSEWITALRIATGILSQRSSDGLLAAATPVTTEMKMHVDASRRISGDLSKRAAKAAFESGTSRTIGRRTMGTRVSLRDLAMVSADGKELTGTMGSIGEFGSMMVRTGEFGGPDLGSLT # ORIGINAL: g7393.t1 original gene structure, not modified by PASA NODE_1392_length_11628_cov_38.0945 AUGUSTUS gene 3816 11000 . - . ID=g7393;Name=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS mRNA 3816 11000 . - . ID=g7393.t1;Parent=g7393;Name=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 9718 11000 . - . ID=g7393.t1.exon1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 9718 11000 . - 0 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 8558 9466 . - . ID=g7393.t1.exon2;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 8558 9466 . - 1 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 8162 8256 . - . ID=g7393.t1.exon3;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 8162 8256 . - 1 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 7713 7858 . - . ID=g7393.t1.exon4;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 7713 7858 . - 2 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 7003 7521 . - . ID=g7393.t1.exon5;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 7003 7521 . - 0 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 5374 6736 . - . ID=g7393.t1.exon6;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 5374 6736 . - 0 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 5059 5157 . - . ID=g7393.t1.exon7;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 5059 5157 . - 2 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 4549 4655 . - . ID=g7393.t1.exon8;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 4549 4655 . - 2 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 4218 4342 . - . ID=g7393.t1.exon9;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 4218 4342 . - 0 ID=cds.g7393.t1;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS exon 3816 3969 . - . ID=g7393.t1.exon10;Parent=g7393.t1 NODE_1392_length_11628_cov_38.0945 AUGUSTUS CDS 3816 3969 . - 1 ID=cds.g7393.t1;Parent=g7393.t1 #PROT g7393.t1 g7393 MSLQQPANAGVGLPGSPIVVDSEMMGVSAGGDNSPQAQTRHNASVTSSPGSITTGNCQAVVNSDINNDGSVSSAGSISDGNDYRRAARDNDADDESSGFDGAEIARRIRLSSFEMANGSPRTTHHSAAALAQLVSSSSATQHASAQRKNSGNAAGVTSVASNISRKNSGNNNNNNNNNNNSNNSNSNNSNNSNSNNSNSNTSATNAVGAEPVLNSPSAPRSNVAVSGQAWAGPTSAPTAGGTAGGVNTLGNYRLSSKRKSISALSGGIPEDSSVTTFAPRRQSQPLVNVPENPLKETALEVGEEDGECGSDGTDSELDSADEEDRRKYRMSLTTLGFVEKEVESEYQASRASLHYRTLRLSLIFMSVFNVVMTVVLGLGGWGKGARDARGYARYYPIMVALSLGTLIVTAAFVNKWYRGFAHMAMRWRRSFALLFVLANNSAIFTVMGLVGEAGFTPWVWHWIVCIPLLFEGSYVSTILLCSIVVGTGVQIIASGVGSDFPGTMLVLLPLGLAAIFVGLAARTMDHGFRRVWIVQRRVGQRRRNLQKERAQMEALLRLQLPESIINQLKGHQQSLRRASIINTDDFAEAGALEEKSFAQRVPMVTVIFVDLVGWEGIAETHDPDQTISLLNGVFTWFDELSEFYQLEKIKTIGSVYMAACNIPQPVAGHTETTARFALALLREWETESVRIGVTGVHLQIGMSVGEVVAGIVGDLKFCYDIYGDAVNTASRMCKFGVPNKIQCTGDVAKVLRDTLQFSVETAGVREIKGKGAIETFYVTGAREHDTLSNGNEAGASAEVRDHFGAGRRRRKISLLKGVLSGREPDAVNQINVGSRSNMLQIGSVTNIRGTGDATSSISQVTVEEEHPSPSLRTVEGRRGSNHSASSGGNGMSLVRKAVGNKLASGSYSSRAGNGDTSSVHDGSRRGSLTSGYQVHRSHSSVSMMSHSSISRTEVIYPRLNLKLPTATLSLADYATLTGGPYSPQPGRHQGFPFQGNADPLPQHTGIGMPGAVVAGPVDDTSLIQTGSSGDAMPSAFATASFFSSGGYNYTRDGGVGGYRESLSNTAGVVLPYRPNRDSQSRRGSLVTVATMATLASAQNSAPPIVIFRQKEAFASALARGEGSRAIRQLQSIKPRKLTLTYQDALLENEFRVRRAEKARVGFLLHMFAFWVFTILLLAVDAVSDADSAAFKRVTCIRVLGASIACALPGAFVLVLGHPTMSQQLMFNQMLVSSYMVGMGLVTFASVIANPAFADEWIVGEGFFTIATSSIFVSCALVALPGLLFKTALTLTLGHAVFMIVMCASDYAKLPLFDLFYCLVAMLTALMGLHLFENFMRQHFILDAVSLVQRQELELEKALGEQLLHNILPPTVAKQLATDPTFKTASFFPSVTVLAMDIAGFTAMSSTMPAEDIVALLNTLFSKFDALVAVTNVEKICTIGDAYVAACGAPEPCDDHADRIVLLGIGMLKTIADKNIQSIVAPNVKNPLVNVRIGIHSGPCFGGIMGGQLRFKYDLYGEAMSVALGLEQTGQPTFIHVSRDTFDETTLRERSVCALAGIEIIEGPSGGRVLVPGFSSREKEISTVLVRPAPNSRARISMFV* # PASA_UPDATE: g3682.t1, single gene model update, valid-1, status:[pasa:asmbl_8877,status:12], valid-1 NODE_689_length_19027_cov_41.1098 . gene 7188 13799 . - . ID=g3682;Name=g3682.t1 NODE_689_length_19027_cov_41.1098 . mRNA 7188 13799 . - . ID=g3682.t1;Parent=g3682;Name=g3682.t1 NODE_689_length_19027_cov_41.1098 . five_prime_UTR 13553 13799 . - . ID=g3682.t1.utr5p1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 13160 13799 . - . ID=g3682.t1.exon1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 13160 13552 . - 0 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 12917 12972 . - . ID=g3682.t1.exon2;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 12917 12972 . - 0 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 12549 12651 . - . ID=g3682.t1.exon3;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 12549 12651 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 12235 12365 . - . ID=g3682.t1.exon4;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 12235 12365 . - 0 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 11365 11895 . - . ID=g3682.t1.exon5;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 11365 11895 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 9537 11065 . - . ID=g3682.t1.exon6;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 9537 11065 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 9207 9367 . - . ID=g3682.t1.exon7;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 9207 9367 . - 2 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 8573 8817 . - . ID=g3682.t1.exon8;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 8573 8817 . - 0 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 8215 8296 . - . ID=g3682.t1.exon9;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 8215 8296 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 7885 7988 . - . ID=g3682.t1.exon10;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 7885 7988 . - 0 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 7486 7650 . - . ID=g3682.t1.exon11;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 7486 7650 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . exon 7188 7251 . - . ID=g3682.t1.exon12;Parent=g3682.t1 NODE_689_length_19027_cov_41.1098 . CDS 7188 7251 . - 1 ID=cds.g3682.t1;Parent=g3682.t1 #PROT g3682.t1 g3682 MDVAAVDSVADILGKQLSLSNSAAQRSNADAASNEAANVNRSANVAPSRSDPEGRQSMNEGEDLSSAMACAVTPANTAAMFAAVSPHVSMHIVEENDERTAQLDSGGSGACLFATIALASSALGIGTKEGEMSVVRFKVEHKEPSGDVSKRIIAMQRPFTFEQLETRLRADYGPLHAVSFAQGASNYPMRSQVDLDTAIAKSEQPGDGRFSLPLRVVTVDDMSIPAAGSSGVGGGPQSGGSPRHSSLPATTVALAASLPPFIDGGFVADDEDDEEGHVHGTNESVAALPRKGSNSHSPDAHGLGLGGGRLGSGTRTLSGHFVGTAVVGGSPTSLLGGGVGVASALHSQSDPGNVFRMNAAAEAEARREHGVGSEFAVHRMEEAAAREEHERMESLRSDRRPSAARLSVLGEDVASGNMDTTVRFTFPTPGEHGSSPPKAHTPDAPERPPGRSASAVDSSAVTVRPPAEGVRRSVSEPMAARFEGASGFIAHDSDTDDELLAEFHRSHRGHGVAPQRAVQERPKTPDSPPPGQIHGHTSRSHARRDGRDTRSDPGDGSSAHYARAHTGSSGHSNAYQSWRATHAHRGVHAMPSSVQHVQGLGRSAVHAGLTPVKVSPSSSGVLGGAHGQARSFGQQPIAVAGDMARLGHRMSNPDGEFIPDPAYDGNALGDSHHAKPMSPGARQRAFSTGHASHDNSHLSHRSHSPKSAAPHFSVLAYPASSPLHPSGNGGREGEYEMELFWRKHEKFGQARRGSSSALQTGRASDSSVEDVSSLASNSSASLASSASARSGSGHVTTRPRAMTAPSSASAAPHIHAASPSWVSTTSSGASNASAQSGLSTSIPHAAFAHFGTMLADEDIGNGFAAEPSTPTMYGKSGAVFTFTPTDTNGRANASRDRETHEDVVGRHQANSISAAEEHSPKPARWRRGKLLGSGAFGNVYLCLDEVTGTECAVKQVELSSDDPHHQAKEVQSLEMEIALLKNLRHDHIVRYLGTECDGQYLSIFMELMAGGSIASRLKMYGPFEEVLVRRFTRQIALGVAYLHENRIVHRDIKGANLLVDARGTVKLADFGASKRLQSIRCVSGFKSQVGTPYWMSPEVINGSGHGRKADIWSLGCTVVEMLTTKPPWAEYEPMAALFRIGSPNSAIPLPQGLSSIAYSFLRICMERNPDIRAHATDLLSHPFAVQH* # PASA_UPDATE: g3683.t1, single gene model update, valid-1, status:[pasa:asmbl_8880,status:12], valid-1 NODE_689_length_19027_cov_41.1098 . gene 15258 17921 . + . ID=g3683;Name=g3683.t1 NODE_689_length_19027_cov_41.1098 . mRNA 15258 17921 . + . ID=g3683.t1;Parent=g3683;Name=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 15258 15385 . + . ID=g3683.t1.exon1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 15258 15385 . + 0 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 15757 15820 . + . ID=g3683.t1.exon2;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 15757 15820 . + 1 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 16004 16184 . + . ID=g3683.t1.exon3;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 16004 16184 . + 0 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 16498 16571 . + . ID=g3683.t1.exon4;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 16498 16571 . + 2 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 16732 16902 . + . ID=g3683.t1.exon5;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 16732 16902 . + 0 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . exon 17233 17921 . + . ID=g3683.t1.exon6;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . CDS 17233 17391 . + 0 ID=cds.g3683.t1;Parent=g3683.t1 NODE_689_length_19027_cov_41.1098 . three_prime_UTR 17392 17921 . + . ID=g3683.t1.utr3p1;Parent=g3683.t1 #PROT g3683.t1 g3683 MFLWLAFASMMLRTILYTFDFPWTLFGLIFIGNMIPIFFQFATFSLLILFIAKCQLIMQGKEPQVQKRLYPAYATVTLLFFVASLVMSLVISDRINPDDPTLLERGFDRDISLYSALVFGTLVILVVLYGYKTHKMLFVFVLSKTKREKVRRFTILIVIYFSIFIMRTLWDISYLTGWNVIQNYLNKLNSDDARHSNEIGYYTSSLIFYSIVEVMPTVFLLVSFYMWLPSGPLPQQDGANQPILTNMRSNDDVYTIEA* # PASA_UPDATE: g3680.t1, single gene model update, valid-1, status:[pasa:asmbl_8879,status:12], valid-1 NODE_689_length_19027_cov_41.1098 . gene 59 1657 . + . ID=g3680;Name=g3680.t1 NODE_689_length_19027_cov_41.1098 . mRNA 59 1657 . + . ID=g3680.t1;Parent=g3680;Name=g3680.t1 NODE_689_length_19027_cov_41.1098 . exon 59 188 . + . ID=g3680.t1.exon1;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . CDS 59 188 . + 0 ID=cds.g3680.t1;Parent=g3680.t1;5_prime_partial=true NODE_689_length_19027_cov_41.1098 . exon 487 599 . + . ID=g3680.t1.exon2;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . CDS 487 599 . + 2 ID=cds.g3680.t1;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . exon 881 988 . + . ID=g3680.t1.exon3;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . CDS 881 988 . + 0 ID=cds.g3680.t1;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . exon 1255 1657 . + . ID=g3680.t1.exon4;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . CDS 1255 1467 . + 0 ID=cds.g3680.t1;Parent=g3680.t1 NODE_689_length_19027_cov_41.1098 . three_prime_UTR 1468 1657 . + . ID=g3680.t1.utr3p1;Parent=g3680.t1 #PROT g3680.t1 g3680 GSSDSYSMFMLPSLSQPYVHEAVLILLITMGERRNWLRFWLFAAMVIVGMAELLFYLQAMDTKKEPLFSVPTFRAAEILHKLFASAILAMTVVVTYWGGDPRTELEIAESIVASQMRQLELAAAAGSLKQNPNPTENSLPKIARILAKPEVLTEVNRARKKAVKDFQEAQAANATNAAANAQKQKAR* # PASA_UPDATE: g3684.t1, single gene model update, valid-1, status:[pasa:asmbl_8878,status:12], valid-1 NODE_689_length_19027_cov_41.1098 . gene 17964 18805 . - . ID=g3684;Name=g3684.t1 NODE_689_length_19027_cov_41.1098 . mRNA 17964 18805 . - . ID=g3684.t1;Parent=g3684;Name=g3684.t1 NODE_689_length_19027_cov_41.1098 . five_prime_UTR 18782 18805 . - . ID=g3684.t1.utr5p1;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . exon 18632 18805 . - . ID=g3684.t1.exon1;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . CDS 18632 18781 . - 0 ID=cds.g3684.t1;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . exon 18372 18497 . - . ID=g3684.t1.exon2;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . CDS 18372 18497 . - 0 ID=cds.g3684.t1;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . exon 17964 18190 . - . ID=g3684.t1.exon3;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . CDS 18125 18190 . - 0 ID=cds.g3684.t1;Parent=g3684.t1 NODE_689_length_19027_cov_41.1098 . three_prime_UTR 17964 18124 . - . ID=g3684.t1.utr3p1;Parent=g3684.t1 #PROT g3684.t1 g3684 MTQIVEQNLMRAVEELKTYVSNSEGHHDHRKDSLRDVVTKKIQEQDNLGKVLREKQRSFKESFEPNLRQLQMCRDLRKLMQCKIECMQRQQLERQGGGRKGRAEAEMQDHLIL* # ORIGINAL: g3681.t1 original gene structure, not modified by PASA NODE_689_length_19027_cov_41.1098 AUGUSTUS gene 2595 6364 . - . ID=g3681;Name=g3681.t1 NODE_689_length_19027_cov_41.1098 AUGUSTUS mRNA 2595 6364 . - . ID=g3681.t1;Parent=g3681;Name=g3681.t1 NODE_689_length_19027_cov_41.1098 AUGUSTUS exon 5328 6364 . - . ID=g3681.t1.exon1;Parent=g3681.t1 NODE_689_length_19027_cov_41.1098 AUGUSTUS CDS 5328 6364 . - 0 ID=cds.g3681.t1;Parent=g3681.t1 NODE_689_length_19027_cov_41.1098 AUGUSTUS exon 2595 4911 . - . ID=g3681.t1.exon2;Parent=g3681.t1 NODE_689_length_19027_cov_41.1098 AUGUSTUS CDS 2595 4911 . - 1 ID=cds.g3681.t1;Parent=g3681.t1 #PROT g3681.t1 g3681 MGRKSRKSRGTKEPEISIAGSAKGLSLVELRTRKREAILQRLHGAENIPILQQHLNRDRPEESPLASATAATTAAPHDVQRVEQRLSVPSSMIGRLGGLSTGAPKASVAAPPPSSASTGPPSVPSSTSVLAFDRMVARFGTRRIFEKNIYRICTDLCVRKNDVWRAWKEGRMSDLPPGLIERVERSLVPKTGRRSQDIDNKSAHTKGATGAMGGDDDANGNSDAREQLRNDEPSGKRKRVPTDSEAAVGAAVDAAPGNPAGGEDAVASVDVASAPTIALDRALEPVPKRRKTDENFRVKTFEEIMEDKRAGREGRSIREVRTEGGREHAGDGRGARGAADSDKHSRHRDERRNQSAVAAGGTRGEATADAHSNVDGVGAAAEEDRGGVERVSRDDDADRNFERGRRRTERSPPADARDAPARGADRRDHRGRGMQTGGRPGDRSAYDTYDPETRYVPGAGDGGLRRGGEAGDWERGRVRERQGDWDPRSRGDRRSPLRDRHHRSAADRAVSPDRGRFVRRDDDVLRRASGGGGGSGFRRDGGDWDRMSRDRGVGVADGTRRYVPNYQLRPPRVRDDRPPLGYDRHEGPRGGARRYADRGWESRDGRFRPEDGKESSRVVDNNGVAGSDRRGEDRSPSPARSDKSGQQSRAGDDGGDASDRDVDGGASSRSASRSASRSASSVGSRSPSRSPSRSPSRSRSQSPAGSRDESHSRGSSRSRSRSGSRSRASSPASDRTGGSDDSDRSGSAVSVRSGRSNASGQSNHSNGDRRADSPGAHEGEATNDVDGGDRPAVARSSPAKQARASDAQGNVRDESGPRAGASLNDGGVPRDPRDSGVRRGHYERAGDDTRAGADSHARGHGYSASHRDDVRTHGDAGSDRRVEYDPRRGSAAPAWERQPPHDRHRPSIAPAQHPSDREHGADARHHALRSPERRGPDHPRAYADRDIRDRDRRQDDWQRDRNRGRERNFRDASRDSRERSAVGDRASREWSDRGRQSRERDGDDRALFRADAALAYVRNPYVDARGDFAVGVGGGSGGAWGPSAGMHPYPSVPPAHAYLPQGAPFESSVSYRPSYGGAASRSAFPEASAPPNVRGMGGMGMGHVGMDGRAYPRDGRR* # PASA_UPDATE: g13297.t1, single gene model update, valid-1, status:[pasa:asmbl_4892,status:12], valid-1 NODE_2720_length_5343_cov_33.9935 . gene 3945 5275 . + . ID=g13297;Name=g13297.t1 NODE_2720_length_5343_cov_33.9935 . mRNA 3945 5275 . + . ID=g13297.t1;Parent=g13297;Name=g13297.t1 NODE_2720_length_5343_cov_33.9935 . five_prime_UTR 3945 4128 . + . ID=g13297.t1.utr5p1;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . exon 3945 4279 . + . ID=g13297.t1.exon1;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . CDS 4129 4279 . + 0 ID=cds.g13297.t1;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . exon 4501 4581 . + . ID=g13297.t1.exon2;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . CDS 4501 4581 . + 2 ID=cds.g13297.t1;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . exon 4878 5275 . + . ID=g13297.t1.exon3;Parent=g13297.t1 NODE_2720_length_5343_cov_33.9935 . CDS 4878 5275 . + 2 ID=cds.g13297.t1;Parent=g13297.t1;3_prime_partial=true #PROT g13297.t1 g13297 MSKSKRQRQEDDDIREVDPPADEHDLYGNQTREERQLIRQGYRTIQTDIDKNRHNLIEGDDDGLNKLLEDAAKNFRQVKRTHEAAIDSQVIAQISTMGAQRAMKMSTDFVNFDANVFIAKLKGKMGVHIDEAHGGAASDTQNDDASAADHNKDVVAGWAKLGRLALPIFRTLPAVSFVYGPLEIVQVQRKQAERQKRLKFDESQKVTPLE # PASA_UPDATE: g13296.t1, single gene model update, valid-1, status:[pasa:asmbl_4893,status:12], valid-1 NODE_2720_length_5343_cov_33.9935 . gene 1121 3412 . - . ID=g13296;Name=g13296.t1 NODE_2720_length_5343_cov_33.9935 . mRNA 1121 3412 . - . ID=g13296.t1;Parent=g13296;Name=g13296.t1 NODE_2720_length_5343_cov_33.9935 . five_prime_UTR 3348 3412 . - . ID=g13296.t1.utr5p1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 3274 3412 . - . ID=g13296.t1.exon1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 3274 3347 . - 0 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 3038 3140 . - . ID=g13296.t1.exon2;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 3038 3140 . - 1 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 2803 2876 . - . ID=g13296.t1.exon3;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 2803 2876 . - 0 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 2574 2649 . - . ID=g13296.t1.exon4;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 2574 2649 . - 1 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 2249 2329 . - . ID=g13296.t1.exon5;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 2249 2329 . - 0 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 1845 1910 . - . ID=g13296.t1.exon6;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 1845 1910 . - 0 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . exon 1121 1685 . - . ID=g13296.t1.exon7;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . CDS 1257 1685 . - 0 ID=cds.g13296.t1;Parent=g13296.t1 NODE_2720_length_5343_cov_33.9935 . three_prime_UTR 1121 1256 . - . ID=g13296.t1.utr3p1;Parent=g13296.t1 #PROT g13296.t1 g13296 MADVSDAALAQAVHDVKSDNSNTDWVAFGYKDKTKITVSGKGDGGHAELMNFLNNGKDQVYYVLLRLIDGDQESRRVKFVLLTWVGENVGGLVKGRVSTHKPTIAALVGQFHVELRIESTREASEDIIRKKIKAAQGADYDTGSNKNGYKPSGDIKKTALSAYSQKEKEGNIGGVVYVTTALPQTTPVDLGGRPMVAAPSDAKKNIKMLDSSKFDGKGSEFKRTDSAQSTGSLPSPGGRSPRPVRASEEESLSKLSVQDDAPAPAPAAAPAAAAEEEEAAPEAQEEAAPAPADDEAPADE* # PASA_UPDATE: g1117.t1, single gene model update, valid-1, status:[pasa:asmbl_4876,status:12], valid-1 NODE_2712_length_5371_cov_39.6307 . gene 2350 5227 . + . ID=g1117;Name=g1117.t1 NODE_2712_length_5371_cov_39.6307 . mRNA 2350 5227 . + . ID=g1117.t1;Parent=g1117;Name=g1117.t1 NODE_2712_length_5371_cov_39.6307 . five_prime_UTR 2350 2664 . + . ID=g1117.t1.utr5p1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 2350 2804 . + . ID=g1117.t1.exon1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 2665 2804 . + 0 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 3060 3146 . + . ID=g1117.t1.exon2;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 3060 3146 . + 1 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 3594 3780 . + . ID=g1117.t1.exon3;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 3594 3780 . + 1 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 4048 4182 . + . ID=g1117.t1.exon4;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 4048 4182 . + 0 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 4418 4483 . + . ID=g1117.t1.exon5;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 4418 4483 . + 0 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 4819 4925 . + . ID=g1117.t1.exon6;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 4819 4925 . + 0 ID=cds.g1117.t1;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . exon 5116 5227 . + . ID=g1117.t1.exon7;Parent=g1117.t1 NODE_2712_length_5371_cov_39.6307 . CDS 5116 5227 . + 1 ID=cds.g1117.t1;Parent=g1117.t1 #PROT g1117.t1 g1117 MFWKFGFAAMSAIDSILDKEQFNLIDLLKEEDLLQEVKSHNKRLLDYLSRKDVLQELIDYTTVEPDEDLDETVRYKFPNVASEVLSSEVWPLIDGISNSPELLDQLWGFLDAGERLNPLMGSFFGKVAGVLITKRPTPNLEYLKGKAGLLDSILSHVATPAVVDLIPRMVAIQERKDAEFAAEWLHETKLVRQLIDKFSPSNDDYVHSNAAQALVEIVTVCNEQMGLDPPLKSPLVEDFESEENLALLFSHIFSGNESSIINGLTYLLSLADNRIPA* # ORIGINAL: g1116.t1 original gene structure, not modified by PASA NODE_2712_length_5371_cov_39.6307 AUGUSTUS gene 169 1538 . - . ID=g1116;Name=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS mRNA 169 1538 . - . ID=g1116.t1;Parent=g1116;Name=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS exon 1491 1538 . - . ID=g1116.t1.exon1;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS CDS 1491 1538 . - 0 ID=cds.g1116.t1;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS exon 1092 1316 . - . ID=g1116.t1.exon2;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS CDS 1092 1316 . - 0 ID=cds.g1116.t1;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS exon 415 915 . - . ID=g1116.t1.exon3;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS CDS 415 915 . - 0 ID=cds.g1116.t1;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS exon 169 298 . - . ID=g1116.t1.exon4;Parent=g1116.t1 NODE_2712_length_5371_cov_39.6307 AUGUSTUS CDS 169 298 . - 0 ID=cds.g1116.t1;Parent=g1116.t1 #PROT g1116.t1 g1116 MSSLPLVPGYTFHDPMKAKYHRPQTLDYKNGYAVKGVPSVGIGGERLPEVHRSEESLERDLQATGVMLTYGPSKKVKDSTYIPAHVALDKKTLRFDAYFREAVQESPDETFRIRKVKIYYYLEDDSIQVVEPVVENSGIPQGVLLKRQRLPRNNLGECYSYEDLNLGIGVRFYGKIFHIVDCDGFTREFMAKSGIDLNPPSEFPEDPYGLLRSKPTRVHTHTQKDDKLKKFLENDRKVLRFYAIWDDRISMFGERRPFVLHYFLVDDTVEVREVHTPNDGRDAFPTLLKRQRLPKQQTDKS # PASA_UPDATE: g11241.t1, single gene model update, valid-1, status:[pasa:asmbl_6599,status:12], valid-1 NODE_3812_length_2700_cov_35.6309 . gene 64 1664 . - . ID=g11241;Name=g11241.t1 NODE_3812_length_2700_cov_35.6309 . mRNA 64 1664 . - . ID=g11241.t1;Parent=g11241;Name=g11241.t1 NODE_3812_length_2700_cov_35.6309 . five_prime_UTR 1612 1664 . - . ID=g11241.t1.utr5p1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . exon 1504 1664 . - . ID=g11241.t1.exon1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . CDS 1504 1611 . - 0 ID=cds.g11241.t1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . exon 1312 1407 . - . ID=g11241.t1.exon2;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . CDS 1312 1407 . - 0 ID=cds.g11241.t1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . exon 959 1059 . - . ID=g11241.t1.exon3;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . CDS 959 1059 . - 0 ID=cds.g11241.t1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . exon 492 557 . - . ID=g11241.t1.exon4;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . CDS 492 557 . - 1 ID=cds.g11241.t1;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . exon 64 161 . - . ID=g11241.t1.exon5;Parent=g11241.t1 NODE_3812_length_2700_cov_35.6309 . CDS 64 161 . - 1 ID=cds.g11241.t1;Parent=g11241.t1;3_prime_partial=true #PROT g11241.t1 g11241 MLMRHYSSALMRRVWLSQKKKLPAKLHRYRIVKGDLVEVCKGPHKGRQGVVLCVIRATNEIFVENVNTRNVAVKQSDGKETEVPTEDPIPYKSVQLVHPQTGKPTKINILYLKPPGRENEDVPQRELIKVRVTKGDNQLIPKPPKQSGKNRPADSK # ORIGINAL: g3093.t1 original gene structure, not modified by PASA NODE_5478_length_835_cov_65.1342_potentialcontaminant AUGUSTUS gene 196 775 . - . ID=g3093;Name=g3093.t1 NODE_5478_length_835_cov_65.1342_potentialcontaminant AUGUSTUS mRNA 196 775 . - . ID=g3093.t1;Parent=g3093;Name=g3093.t1 NODE_5478_length_835_cov_65.1342_potentialcontaminant AUGUSTUS exon 196 775 . - . ID=g3093.t1.exon1;Parent=g3093.t1 NODE_5478_length_835_cov_65.1342_potentialcontaminant AUGUSTUS CDS 196 775 . - 0 ID=cds.g3093.t1;Parent=g3093.t1 #PROT g3093.t1 g3093 MVITTFEIKANELIVPMDARVYEPVFTLIESTLPPYQKSLLNLKNLPKEYEKYAVLIWAEPRPRMELHAFAWNYEPPREGEADEGVGYCVWGPCLFHVFVTKEGKPRQLFRSYVSIEVAKKIVKKYTSCMAPDSCDIVIATNDCECTGENDPEPDTASSANENAGSNEAKSIQRERAADENDEDLSRRGRAII # ORIGINAL: g2864.t1 original gene structure, not modified by PASA NODE_12167_length_274_cov_62.7136_potentialcontaminant AUGUSTUS gene 1 274 . - . ID=g2864;Name=g2864.t1 NODE_12167_length_274_cov_62.7136_potentialcontaminant AUGUSTUS mRNA 1 274 . - . ID=g2864.t1;Parent=g2864;Name=g2864.t1 NODE_12167_length_274_cov_62.7136_potentialcontaminant AUGUSTUS exon 1 274 . - . ID=g2864.t1.exon1;Parent=g2864.t1 NODE_12167_length_274_cov_62.7136_potentialcontaminant AUGUSTUS CDS 1 274 . - 1 ID=cds.g2864.t1;Parent=g2864.t1 #PROT g2864.t1 g2864 RLHVHGKRRPRRLCVLLECADLRCVGVLCKQPLLREPQGRRKCCNAPWSRRRRHSLHIRRHCTLRGVQYERLFLGCRRHSVGIPADKCGLF # ORIGINAL: g12153.t1 original gene structure, not modified by PASA NODE_1547_length_10539_cov_40.902 AUGUSTUS gene 2790 10003 . - . ID=g12153;Name=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS mRNA 2790 10003 . - . ID=g12153.t1;Parent=g12153;Name=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 9634 10003 . - . ID=g12153.t1.exon1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 9634 10003 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 9319 9396 . - . ID=g12153.t1.exon2;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 9319 9396 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 8642 8829 . - . ID=g12153.t1.exon3;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 8642 8829 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 8274 8325 . - . ID=g12153.t1.exon4;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 8274 8325 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 7742 7981 . - . ID=g12153.t1.exon5;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 7742 7981 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 6188 7438 . - . ID=g12153.t1.exon6;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 6188 7438 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 5748 5881 . - . ID=g12153.t1.exon7;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 5748 5881 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 5186 5340 . - . ID=g12153.t1.exon8;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 5186 5340 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 4752 4854 . - . ID=g12153.t1.exon9;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 4752 4854 . - 1 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 4246 4377 . - . ID=g12153.t1.exon10;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 4246 4377 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 3931 4025 . - . ID=g12153.t1.exon11;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 3931 4025 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 3490 3659 . - . ID=g12153.t1.exon12;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 3490 3659 . - 1 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 3169 3290 . - . ID=g12153.t1.exon13;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 3169 3290 . - 2 ID=cds.g12153.t1;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 2790 2978 . - . ID=g12153.t1.exon14;Parent=g12153.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 2790 2978 . - 0 ID=cds.g12153.t1;Parent=g12153.t1 #PROT g12153.t1 g12153 MQGSVDSKDSFYKGNNAQTDGGAWYLVGNGPFSSAADTFTGNNAGATGGAVSVRQTPNVTQPIVIIEGSIFDSNTGSNGGAIYMAKFENLDTRGSAEVHEPTDDLPSLVVSNAVFKNCNGTSGGAVKLDSYAVAKMTSITADDNYSDYGGFLYAVGNSRALFYNSTFRRNKAAAAGVMAVDDKAHLHIHGGGIFNSQSELLGGAILAGLDSEVVVEDATFEMNKAGESGGFLALQNRASGTVSRCRISHQSAGEAGGSILATGATTLVVSDTVMDASCAYAYGGAVRGSGTAHMTFVNVTLTHNRATVGGAIHGKNSVNATLRGCTIQSNDAVSGGGALAFEDTSSVLVEASTFTNNDGGADSGGGIRLYGTVACTLKSSVFKNNTALQGGAISAEAAANFAGNCADDASGNAPSPSVSVLVRAARATTSTGAGLSTFSLLILNTTGSDNTARTDKSTASSSSADANGGFAMLIGGNTEIGGGTIVVRNSADGSGGGLAYIPSDLDSENIRSSLTVGGTVFADNTAARAGGALFIDKSEFATVAFGTNVTLRKNNAQNGGGLYVASPLRFPDGLSNITFIDNSARLSGDKFTTPGTQINSTGNPVPPMIYQGQFVPAITLALFDSVNAISKTSGAEAEISVAVVSAATGKASGSVTMDGGNSRNLVDGTTTYDRLQIYGPPGKYLLVFRMTGGLQPQLSVPFELPDCDSMPSRTLYVVNNRTSCVKVFKMNEGLRTSFVVFAGLGETFALLMGCVVIWLRDKEVIKASSPLFCLIIVAGSMIGYAVVFSQAPGANAATCITNQWLGHLGFGITFAALFAKNYRIMSIFNNKKMRQRLRATSDSFLMSIVAAVLVVLIAYLIVWMAVDPPTSTATLDDSTDTLIYSCETNSPLWSLILYVVEGLSLAWGVFLAWKTKKVPSKFNESKYIAFSIWNITVMAGIILPLNYTVDVSNPDTQFLFTAVGIFISTTGVLCFMFVPKLHAYRKGEIAKLQTTMLSSLSGNDLNSSAGGQEINELRMLEARQEVDLLKQKYEKAVKENGDLWAELDMLKDKVRVQLSGHPRTLLMMAFSMLTLAIPPATDHLVATRLSLF* # ORIGINAL: g12152.t1 original gene structure, not modified by PASA NODE_1547_length_10539_cov_40.902 AUGUSTUS gene 394 1959 . + . ID=g12152;Name=g12152.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS mRNA 394 1959 . + . ID=g12152.t1;Parent=g12152;Name=g12152.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS exon 394 1959 . + . ID=g12152.t1.exon1;Parent=g12152.t1 NODE_1547_length_10539_cov_40.902 AUGUSTUS CDS 394 1959 . + 0 ID=cds.g12152.t1;Parent=g12152.t1 #PROT g12152.t1 g12152 MPKAAAASKRAHRRGRADPAGSKALDGVCHMESVPSEVLQTILHWVIKRDVASMLSCRVVCSRFRTLIDGLLRTHFRRGLPIEAVVVSIDDADLDRWEDDMCTGNCKGGRVAFGKPVRSDAGKYVFDLNRMITTCEERLVLHMYIDDPFLGIKLGHPVSDRERRAYVNHHEQLGPNTLMVSQLESDLEFGDSPSPNATLGRNFTFSVPESHNDGNDGDAGEGSAEGFWLETLEFDSLAAYVPVLVAHHTSRKTIARKYQASLPPVGLFIRLGVMDGYARQYDALVAAAGHVHAVNTHAQWLKIFSRHPPEPMCAALDAMGRHRSSYAVSFEEAMDIPMEIANREDFAFDSHLDELRGLGMNHLCCREGIIPLHVLSILERSLMTPGDIAAYLDNKLAQGGVTWLLREEVSSYIGRMKREAALTCALAAHGIRLKKGLPECSEYISGTSTKTLEEVVAHVREEAHNLRGSRAAVPATEVSDEQLDMMLDQMENELDDEESFSDSNSDGGESLSDSDEGEEEG* # ORIGINAL: g8022.t1 original gene structure, not modified by PASA NODE_2822_length_5054_cov_46.1318 AUGUSTUS gene 938 4309 . - . ID=g8022;Name=g8022.t1 NODE_2822_length_5054_cov_46.1318 AUGUSTUS mRNA 938 4309 . - . ID=g8022.t1;Parent=g8022;Name=g8022.t1 NODE_2822_length_5054_cov_46.1318 AUGUSTUS exon 1990 4309 . - . ID=g8022.t1.exon1;Parent=g8022.t1 NODE_2822_length_5054_cov_46.1318 AUGUSTUS CDS 1990 4309 . - 0 ID=cds.g8022.t1;Parent=g8022.t1 NODE_2822_length_5054_cov_46.1318 AUGUSTUS exon 938 1839 . - . ID=g8022.t1.exon2;Parent=g8022.t1 NODE_2822_length_5054_cov_46.1318 AUGUSTUS CDS 938 1839 . - 2 ID=cds.g8022.t1;Parent=g8022.t1 #PROT g8022.t1 g8022 MSIELCLIGSSAPVFSTNVDNSAMDSGELSIEVHDDGRGVGSVVMSTDPSTATSSGQQPTAMDVSRSILVEYATLREDPASIRAVSRTGLTPLPTDDHLLTVGGLMKRHRTNVGLGLSNDEAARRLATDGPNSIRAPPTDWLRKVAGYLFGGFCWLLWIASIITFLAWKPLGQPPAIANLALAIVLLIVIFLQVAFTAYQDWTSSRVMGSINSMLPQFATVLRGGRTAKVPISNVVVGDIVLVKYGNKIPADLRLVDVYGLRVDNSILTGESVPTNCTVEATNNDMHETRNIALMGTYITEGEATGVAIATGERTIMGKVALLASRAKPKSTILQKEIQHFVHIIAALALCTGTICMIVWGAWLRSSFPDFLNLSNMLSTVMGVIVAYVPEGLPIAVTLVLTIIARRMFRQKVLVKNLTTIETLGCVNVLCSDKTGTLTTNQMVVGSAAVGDTAINIDHGPMDKRAEMIGFRELGVVAHLCNGASFDVEDAGLPISARRAVGDATDVAMLRFAGSIVDMDQNNRLYDRVHHVPFNSHRKYMATIVRPVSENCEHFSGAKTDDLVLLMKGAPDILLRACTHYMAADKSGSVLHLTPEQKEVVMGYQETWGKLGQRVLLVARRTLHKGELPVNTATDDFQVTPLVKDLCIVGLTGIADPARPETASVVKTIRGAGVRVFMVTGDFPATAAAIARKVGIFTREFVHRVREVTESSKGEVAHASLLLTGADIANLTDADWDTIANYNEIVFARTTPEQKFKIVKAFQAHGCVVAVTGDGVNDAPALKNADIGIAMGSGSDVAMEAASMVLLDSNFSSIVEALRQGRTVFDNLKKVCIYLLPAGSFAELMPVLVNIFLGIPAPLSSFLMIMICVLTDMAPAMSLMYEEGEADLLTRKPRKPGKDALVNGKLLAHAYLFLGVTEAFFAHLMYFVYMKAEWNVNAGDLILAFDRWGVDGYAGLTSDEQATANATGRCVFFVTLVIMQFGNLMATRTRKLSIFQQSPLRNPYLFLAMPCSIVVAIILLYGPAIQNLFSTSPIPVQYWFYPFPMAIFIVFLDELRKLYVRHRPESLVARYAW* # ORIGINAL: g11225.t1 original gene structure, not modified by PASA NODE_347_length_26331_cov_41.3955 AUGUSTUS gene 10795 13531 . + . ID=g11225;Name=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS mRNA 10795 13531 . + . ID=g11225.t1;Parent=g11225;Name=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 10795 11450 . + . ID=g11225.t1.exon1;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 10795 11450 . + 0 ID=cds.g11225.t1;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 11692 11968 . + . ID=g11225.t1.exon2;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 11692 11968 . + 1 ID=cds.g11225.t1;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 12389 12637 . + . ID=g11225.t1.exon3;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 12389 12637 . + 0 ID=cds.g11225.t1;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 12983 13124 . + . ID=g11225.t1.exon4;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 12983 13124 . + 0 ID=cds.g11225.t1;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 13332 13531 . + . ID=g11225.t1.exon5;Parent=g11225.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 13332 13531 . + 2 ID=cds.g11225.t1;Parent=g11225.t1 #PROT g11225.t1 g11225 MAVWSRRTRIRRIVVVTLLLMALMVASKLYEQRFSPSAVDGDLRSLVSKNRGDDTVKRQFIAIKPVVELFAEDAKVKGEAHAVERVRSLDTVDAPVAPVAVAESKSEPQVAVDATEYGDLEEIFVSDGGALDGVDEELAAEERETHDRSRPGAKTVNKGDDKKGAGLEQLQSADKQIARVKSPNGVDTRRVDAEIAGNVHVFYYAWYGTPKFDRKWFHWNHRVLEEGGKEYVPPEDIGANFYPAIGPYSSNDERAITSHMRGIRASGIDVVVVSWYPPGLSDDNGGFSDSAVLRVLDLAELHGLRVCFHVEPFNGRNAQTMRNAVKYAIDTYGNHPGLYRDRRRGNRPWFYVYDSYHTKPDEWATLLTPAGRISLRGSEYDAVFIALYVNEIDREMVSTGGFDGMYSYFATDGFVSGSTTRNWQGMRAFTKNAGALWVPSVGPGYIDTRIRPWNSRNARSRDDGAYYRRMFQAAIRTKPDVISITSWNEWHEGTQVACSAHFRHNAA* # PASA_UPDATE: g11223.t1, single gene model update, valid-1, status:[pasa:asmbl_6111,status:3], valid-1 NODE_347_length_26331_cov_41.3955 . gene 2145 4019 . - . ID=g11223;Name=g11223.t1 NODE_347_length_26331_cov_41.3955 . mRNA 2145 4019 . - . ID=g11223.t1;Parent=g11223;Name=g11223.t1 NODE_347_length_26331_cov_41.3955 . five_prime_UTR 3607 4019 . - . ID=g11223.t1.utr5p1;Parent=g11223.t1 NODE_347_length_26331_cov_41.3955 . exon 2911 4019 . - . ID=g11223.t1.exon1;Parent=g11223.t1 NODE_347_length_26331_cov_41.3955 . CDS 2911 3606 . - 0 ID=cds.g11223.t1;Parent=g11223.t1 NODE_347_length_26331_cov_41.3955 . exon 2145 2672 . - . ID=g11223.t1.exon2;Parent=g11223.t1 NODE_347_length_26331_cov_41.3955 . CDS 2511 2672 . - 0 ID=cds.g11223.t1;Parent=g11223.t1 NODE_347_length_26331_cov_41.3955 . three_prime_UTR 2145 2510 . - . ID=g11223.t1.utr3p1;Parent=g11223.t1 #PROT g11223.t1 g11223 MGNCCASLCGGNANDRSGRGGGQYRYLGTYSDQELIDDVEFDNLMDGPSQNEGRGRMLLESQSGEDMGRRRGSEWENNARILTAEEIKRLTQRKMEELVEEQRRMEIEENDRQRRLEEELKLEEEALIEAKKQAARAAKEARGAAGGHGHTHAQANGRGLSSPNLGRASAAQSAYVQPKATAASVGLVDASNRHDSTDDFDTFLENVKARSLNMNGAAVSSSSVYAVDDAGESAGASPSPAAEDASVDPPASQDDIDGGFGDNVEWASGLDAAMDAVRSANEAAE* # ORIGINAL: g11224.t1 original gene structure, not modified by PASA NODE_347_length_26331_cov_41.3955 AUGUSTUS gene 4328 9283 . - . ID=g11224;Name=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS mRNA 4328 9283 . - . ID=g11224.t1;Parent=g11224;Name=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 7815 9283 . - . ID=g11224.t1.exon1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 7815 9283 . - 0 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 7273 7708 . - . ID=g11224.t1.exon2;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 7273 7708 . - 1 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 6339 7178 . - . ID=g11224.t1.exon3;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 6339 7178 . - 0 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 6064 6197 . - . ID=g11224.t1.exon4;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 6064 6197 . - 0 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 5455 5941 . - . ID=g11224.t1.exon5;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 5455 5941 . - 1 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 5102 5306 . - . ID=g11224.t1.exon6;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 5102 5306 . - 0 ID=cds.g11224.t1;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 4328 4941 . - . ID=g11224.t1.exon7;Parent=g11224.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 4328 4941 . - 2 ID=cds.g11224.t1;Parent=g11224.t1 #PROT g11224.t1 g11224 MSALSEFRVLYTNQKQKKAKTWHDGQLLVDPSRAKAILFDEGGTPLDTYFLKGKDISVGDELETDKYLVSIDAQIAAPAPFGLNGQLEPIPAQQRSTIPGCTTANPALRPLRASGGNMLSRRPMQGSLAAPQPWSSHSPAGSLAPSDTSARAFEGGQSAFGRADENSTVSFFLAKRLEVETGRGGDSLACAALRDLCDTNRGKNVASSQFRAPRRTAADLIALLANPVASSYAPPIQPPQAVSDPPARLNRAIEDTTASLRAPFASGDESAYKHSALSRRGMFAGEGRMRSADVPWNDAQDNANVVPRNTRPLPMSARTFGVGGRYSAPGGKVPHVTRPVEAEPAFDNSGDDTLFECGSHYDEQSHMTSGNTTRPPTSWKAPVPAQYGTKSLVGGPDRGRSSFADGSRSSLVSLNLTFLSGADCSQKPPSKRQGSIPSSFRNLREYKQVLEDLLVEHINVWLEGLAHRYHRLLSQVEIVFCEGKAEKENTGAPTGPSCKHGTARVASVKKEGPNKGRLFYSCSAPKESSCNFFQWADEWAGGGKQGSTSGGVGCGRGTKSRISTRKDLEQICKSQGVSLYCGCELGRKAIGGKYHGKGGKGGFNRFSSENERNSLFLTISRKERSSAYSKDDLWIVSDSPYFESATTMIARSTFFGPSSDLDVEIAHVSGCSPALIIGSASIYAIHAGDAAGEIGAIDNIRNNVGESLPIVPYLLRGLDGGRPTDMGCKPYSSTLRLLSTVAQRTAIADELCAAHGLNDDQSRALRACGEMLKSSDEDCAPTPPILLIHGVFGAGKSKLLSVVIMYLVRLVEEGLGVDVARGSKLLISSMTNVAVDRVLEGLASAGFERFVRVGSVRKIAKQILPFSVHSSSSASQDLNDLRDMLKEDISNTEKAYVRKSIERIQKGDRAKRLEEAPVIGVTCSATVFPCLDGLQFPMVVLDECSQMSEATSLLPIARFGCEKLVLVGDPKQLSPTITDSESEHTNGLERTLFERLTACNIAPVLLRTQYRCNPMISRLPNTLYYGGSLQDGCTNDDRSPLDPRLATIAFFDVNSAAGEQQGPDGSYMNESEADFVTHLARVVVAMGVPPADIGIVCLYRSQVASVQQRLRSGQAGSDVTIFVSTVDAFQGGEREVIILSCVRTKQVGFADSARRINVALTRARRHLFIAGSARTLLRNGMWRTVIEFCKGCPNGFEDACAFVDRTPIDTIAPLSPPDDDANTNNDEVARVPTSAEINNQADSNSDADDFSPPHDRTRTRTRTAARSLHVGATARSRRTITDVDSDSDATQPAKRIRRAVASESPPNCSFEVTDLTGDDGVRGFTGRMSESAVPHQLDMHEEEDGDGHVSGCDVDGRRRVAPISRVIFDDASLAYANGDDDDDLTAPALSNMGR* # PASA_UPDATE: g11228.t1, single gene model update, valid-1, status:[pasa:asmbl_6110,status:3], valid-1 NODE_347_length_26331_cov_41.3955 . gene 21420 24583 . + . ID=g11228;Name=g11228.t1 NODE_347_length_26331_cov_41.3955 . mRNA 21420 24583 . + . ID=g11228.t1;Parent=g11228;Name=g11228.t1 NODE_347_length_26331_cov_41.3955 . five_prime_UTR 21420 21493 . + . ID=g11228.t1.utr5p1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 21420 21554 . + . ID=g11228.t1.exon1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 21494 21554 . + 0 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 21799 21914 . + . ID=g11228.t1.exon2;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 21799 21914 . + 2 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 22019 22138 . + . ID=g11228.t1.exon3;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 22019 22138 . + 0 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 22359 22509 . + . ID=g11228.t1.exon4;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 22359 22509 . + 0 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 22895 22957 . + . ID=g11228.t1.exon5;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 22895 22957 . + 2 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 23258 23385 . + . ID=g11228.t1.exon6;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 23258 23385 . + 2 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 23658 23740 . + . ID=g11228.t1.exon7;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 23658 23740 . + 0 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 23905 23968 . + . ID=g11228.t1.exon8;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 23905 23968 . + 1 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 24213 24249 . + . ID=g11228.t1.exon9;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 24213 24249 . + 0 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . exon 24424 24583 . + . ID=g11228.t1.exon10;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . CDS 24424 24455 . + 2 ID=cds.g11228.t1;Parent=g11228.t1 NODE_347_length_26331_cov_41.3955 . three_prime_UTR 24456 24583 . + . ID=g11228.t1.utr3p1;Parent=g11228.t1 #PROT g11228.t1 g11228 MAYTTVETGPHNTTEFKAYIKGPNGFVSPFHDIPLYANAEKTVLNVVIEIPRWTNAKMEISKKDPLNPIKQDVKNGKLRFVKNVFPHHGYIWNYGALPQTYEDPAHVDSRTGCKGDNDPIDVCEIGEAVAPRGAVRQVKVLGTVCLLDEGETDWKIIAIDVNDPLASKLNDIGDVEKHMPGFLKATVEWFTLYKIPDGKPANKFAFNGEAKDKAFALDVIAQTHEHWKALLARPESKDVVRTNTSLGQHKIAAAEAEKIVSENRAGTPGASEGSIIDRWHYVSA* # PASA_UPDATE: g11227.t1, single gene model update, valid-1, status:[pasa:asmbl_6109,status:12], valid-1 NODE_347_length_26331_cov_41.3955 . gene 19166 20708 . + . ID=g11227;Name=g11227.t1 NODE_347_length_26331_cov_41.3955 . mRNA 19166 20708 . + . ID=g11227.t1;Parent=g11227;Name=g11227.t1 NODE_347_length_26331_cov_41.3955 . five_prime_UTR 19166 19206 . + . ID=g11227.t1.utr5p1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 19166 19234 . + . ID=g11227.t1.exon1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 19207 19234 . + 0 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 19316 19404 . + . ID=g11227.t1.exon2;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 19316 19404 . + 2 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 19515 19623 . + . ID=g11227.t1.exon3;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 19515 19623 . + 0 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 19874 19958 . + . ID=g11227.t1.exon4;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 19874 19958 . + 2 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 20186 20304 . + . ID=g11227.t1.exon5;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 20186 20304 . + 1 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 20419 20466 . + . ID=g11227.t1.exon6;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 20419 20466 . + 2 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . exon 20566 20708 . + . ID=g11227.t1.exon7;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . CDS 20566 20633 . + 2 ID=cds.g11227.t1;Parent=g11227.t1 NODE_347_length_26331_cov_41.3955 . three_prime_UTR 20634 20708 . + . ID=g11227.t1.utr3p1;Parent=g11227.t1 #PROT g11227.t1 g11227 MASISELKDALAETLENRGVMGQLKARIRAEIFSALDDPHEIKPTLSNENMIINELIREYLEYNGYKYTLSVLMAETGQPKEQLNREFVASELNIVEDAASKEVPLMYSMFSHFVRHGPHGASSAGPGAGPLGAAATSRAQAGVGRSQQQQQHDARRDSVNRSDSEEADRVPPVVVHGGRR* # ORIGINAL: g11229.t1 original gene structure, not modified by PASA NODE_347_length_26331_cov_41.3955 AUGUSTUS gene 25645 26121 . + . ID=g11229;Name=g11229.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS mRNA 25645 26121 . + . ID=g11229.t1;Parent=g11229;Name=g11229.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 25645 26121 . + . ID=g11229.t1.exon1;Parent=g11229.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 25645 26121 . + 0 ID=cds.g11229.t1;Parent=g11229.t1 #PROT g11229.t1 g11229 MAPTPTYTVHTSASPLQTLLESAVTNAVVSVASSSATPVPSAFAMPTPETECPYPYTSVNCSVLYADLIGSAYYGFTYFETTFTCLLVVISLYSLIRVIQWRGWRKRCRQRTILIHVFVSSCLFLVRSIDSYGWQNMISPMAKQCIFGVSFTCQYLLM* # ORIGINAL: g11226.t1 original gene structure, not modified by PASA NODE_347_length_26331_cov_41.3955 AUGUSTUS gene 14805 18538 . - . ID=g11226;Name=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS mRNA 14805 18538 . - . ID=g11226.t1;Parent=g11226;Name=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 18208 18538 . - . ID=g11226.t1.exon1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 18208 18538 . - 0 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 17830 18001 . - . ID=g11226.t1.exon2;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 17830 18001 . - 2 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 17370 17568 . - . ID=g11226.t1.exon3;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 17370 17568 . - 1 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 16890 17100 . - . ID=g11226.t1.exon4;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 16890 17100 . - 0 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 16336 16485 . - . ID=g11226.t1.exon5;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 16336 16485 . - 2 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 15915 16149 . - . ID=g11226.t1.exon6;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 15915 16149 . - 2 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 15682 15755 . - . ID=g11226.t1.exon7;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 15682 15755 . - 1 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 15480 15583 . - . ID=g11226.t1.exon8;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 15480 15583 . - 2 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 15149 15249 . - . ID=g11226.t1.exon9;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 15149 15249 . - 0 ID=cds.g11226.t1;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 14805 14922 . - . ID=g11226.t1.exon10;Parent=g11226.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 14805 14922 . - 1 ID=cds.g11226.t1;Parent=g11226.t1 #PROT g11226.t1 g11226 MGEDQDGRVKRPKIDPELASSSSAPTADVVKVLHILHFNDVYHVESRVREPVGGAARFKVAVDSFAEKSPLVLFSGDAFNPSLTSTITKGKHMVPVLNELGISAAVFGNHDFDFGVPHLEKLARFCNFPWLFSNVIDTSIGEPFASGKRSIVLEHQGLKIGLVGLVEREWIDTMATVPATLHYIDFVEEGQRLVDELHRVHGVDAVIALTHMREANDLTLAEQVTGIDVILGGHDHFYAVKHVGKVSVIKSGCDFRQLSHVELRIIHSASGERRTDITVSQVDVTSAFAENPKIKGMINELGIDEKKLNKVVANTETVLDVTVEAVRTRESNFASYTCDVLRDHFKADVTLLCGGGFRSDDVYGPGPFTLGDLMNILPFEDPAVVISMKGRQLLASLENGVSLYPRHEGRFPQVSGLKFVFDPKKKAGSRVVSVTIANTPIDLDKDYSVCTRLYMAEGRDGYDAMRGCPYIIEEEHGKLFSQVMRLHFMQLKMARIFAHKTEVVHLAIDNLKRRAHIHTPPEIRHHYLNVAPVADGRIVMVEESGSAPLPSSAPVVFKPMLPFN* # ORIGINAL: g11222.t1 original gene structure, not modified by PASA NODE_347_length_26331_cov_41.3955 AUGUSTUS gene 63 1925 . + . ID=g11222;Name=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS mRNA 63 1925 . + . ID=g11222.t1;Parent=g11222;Name=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 63 260 . + . ID=g11222.t1.exon1;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 63 260 . + 0 ID=cds.g11222.t1;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 471 652 . + . ID=g11222.t1.exon2;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 471 652 . + 0 ID=cds.g11222.t1;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 827 1048 . + . ID=g11222.t1.exon3;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 827 1048 . + 1 ID=cds.g11222.t1;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 1178 1417 . + . ID=g11222.t1.exon4;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 1178 1417 . + 1 ID=cds.g11222.t1;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS exon 1718 1925 . + . ID=g11222.t1.exon5;Parent=g11222.t1 NODE_347_length_26331_cov_41.3955 AUGUSTUS CDS 1718 1925 . + 1 ID=cds.g11222.t1;Parent=g11222.t1 #PROT g11222.t1 g11222 LGKEAFAATGANASIAGGHATVLDNRVVVSFDSGASLEISIESPTSTKTEKDKDSADARMKARKCPHAAISPIEAAMELRLHTLLRKHHAHIEAQRHGGSVYGEVANRTSGAKAGAAPPSAVGGLPSGAKSSAAPPRILARTAEAFNECAMRFRLECDLDALASIIRDPHIRVHWSTSTAFDGGVISRARIVIGAEGGRAGRSIVLTLNGDGVEALSENGRPLHLSADDVVPFVMVTCARCLCESASEIARSLMWRPEPSDRLIPMDAGCALSLRSRDGKRRVSIAWDVVVGTKQVRCSMMQLDAGRLGHVSLSGGVYRPVQWDALPGRDSGEKLRYLLLVGAPADSAH* # ORIGINAL: g3441.t1 original gene structure, not modified by PASA NODE_3862_length_2607_cov_35.1556 AUGUSTUS gene 56 2466 . + . ID=g3441;Name=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS mRNA 56 2466 . + . ID=g3441.t1;Parent=g3441;Name=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 56 307 . + . ID=g3441.t1.exon1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 56 307 . + 0 ID=cds.g3441.t1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 582 758 . + . ID=g3441.t1.exon2;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 582 758 . + 0 ID=cds.g3441.t1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 1054 1185 . + . ID=g3441.t1.exon3;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 1054 1185 . + 0 ID=cds.g3441.t1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 1420 1850 . + . ID=g3441.t1.exon4;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 1420 1850 . + 0 ID=cds.g3441.t1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 2037 2115 . + . ID=g3441.t1.exon5;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 2037 2115 . + 1 ID=cds.g3441.t1;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS exon 2344 2466 . + . ID=g3441.t1.exon6;Parent=g3441.t1 NODE_3862_length_2607_cov_35.1556 AUGUSTUS CDS 2344 2466 . + 0 ID=cds.g3441.t1;Parent=g3441.t1 #PROT g3441.t1 g3441 VISGVYPGVTTVELDTLAAETAAYMTTTHPDYAILAARIAVSNLHKETKKQFSAVMADLFNYVDPKTGRPSPLISEETHAIIQKHAVDLDSHVIYDRDFSYAFFGFKTLERSYLLKINGKPAERPQHMLMRVAVGIHGENIEKVIETYNLMSERWFTHASPTLFNAGTPRPQLSSCFLLTMKDDSIEGIYDTLKTCAMISKTAGGIGLNIHDIRASGTYIAGTNGYSNGIVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHADVFDFLDLKKNTGKEEQRARDLFYALWIPDLFMKRVEENKDWSLFCPHEAPGLSDCWGEEFEALYEKYEREGKARKVVPAQKLWFHVLESQTETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYSSPDE # ORIGINAL: g8971.t1 original gene structure, not modified by PASA NODE_1800_length_9171_cov_29.5587 AUGUSTUS gene 823 3833 . + . ID=g8971;Name=g8971.t1 NODE_1800_length_9171_cov_29.5587 AUGUSTUS mRNA 823 3833 . + . ID=g8971.t1;Parent=g8971;Name=g8971.t1 NODE_1800_length_9171_cov_29.5587 AUGUSTUS exon 823 3348 . + . ID=g8971.t1.exon1;Parent=g8971.t1 NODE_1800_length_9171_cov_29.5587 AUGUSTUS CDS 823 3348 . + 0 ID=cds.g8971.t1;Parent=g8971.t1 NODE_1800_length_9171_cov_29.5587 AUGUSTUS exon 3447 3833 . + . ID=g8971.t1.exon2;Parent=g8971.t1 NODE_1800_length_9171_cov_29.5587 AUGUSTUS CDS 3447 3833 . + 0 ID=cds.g8971.t1;Parent=g8971.t1 #PROT g8971.t1 g8971 MATAAYSDALVVYELVERLKSESRVEGGSLGTWLRQKRYIENVSVFISAHSHLFELRNDNYVYLRLNAARRPAAVVAPTPLTVRSQSSPNAADEAVVRRVVTALNRGRVRLTEFPNYVSLNDMGYIRNTYKSLKPFLTTYKTLFQVEGTPGMGSETCSLTPEGKRYLTMSGQRGISSEPASAAQTLANARAPQSAGPSTATSTSAVNATSTSTTHAATKSDDRPSAALVTPSATPSTAAAPSCSSRTPFSLQLSPSDEHIPVHLIDTRDAFVAAKARLEASEALAIDCEMDGSQNKACLALVQVYVSTSSFPHPCIYVFDILSEIGHESVVAVWRAVCNDRVRKVFHDGRRDMDAIRYTVAQYGAMSANIGDVQGIVDVQVLHGLVLHFRGNAGKRRAGFSEVMDFVGLPGNPFKAEMRVRFERKEQTLWTRRPIESDLLSYAAWDVLPLLAASERLEKAVAEAAVGLAHRSSAFAVEEFRQATYKTRGGFEVRLNSDYVIVRFNEYWNAFEYASADDGGVFDDCTPDELGVVNDLTHEQESERETDLMLAVLPEHVQRLIESAQDDLSRASGETVSVCEIRVDEGKPVSVLFNDIAETQHTLDAVCSVTSIMKSLRDIYAHKNNFNRDEDYDDYDENKVDDRPGRSVAFGPDNRVGIEGTLHRISAIRDKARNIVGLTMRVGNGARGAAYILRDVVSSILPSVEGLDPQSLLLVGRPGVGKTTYLRDIARRLADDHGVAQRVVVVDKSGEIGGEGRVAHGALGKARRMHVVDPLSHVLIEAVQNHNPRVLVVDEIGEASHVRAVTTIAQRGTAIVGTAHGTSLGSLLRNPDLRALVGDISTTTVGDALAKELSKDRGDAMRKTKSERKGAPVFSRLVEVRRRKHVVIHWSVAGTVDALLSGERNSRGVVEERWYDQACRHWKARFSIVSCEGPLGEQGGVIGSGGDGGDSWVSRLLGESLSSSPKHVKN* # PASA_UPDATE: g8972.t1, single gene model update, valid-1, status:[pasa:asmbl_2670,status:3], valid-1 NODE_1800_length_9171_cov_29.5587 . gene 4324 7049 . - . ID=g8972;Name=g8972.t1 NODE_1800_length_9171_cov_29.5587 . mRNA 4324 7049 . - . ID=g8972.t1;Parent=g8972;Name=g8972.t1 NODE_1800_length_9171_cov_29.5587 . five_prime_UTR 6780 7049 . - . ID=g8972.t1.utr5p1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . exon 6534 7049 . - . ID=g8972.t1.exon1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . CDS 6534 6779 . - 0 ID=cds.g8972.t1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . exon 5903 6289 . - . ID=g8972.t1.exon2;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . CDS 5903 6289 . - 0 ID=cds.g8972.t1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . exon 5551 5642 . - . ID=g8972.t1.exon3;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . CDS 5551 5642 . - 0 ID=cds.g8972.t1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . exon 5158 5293 . - . ID=g8972.t1.exon4;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . CDS 5158 5293 . - 1 ID=cds.g8972.t1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . exon 4324 4769 . - . ID=g8972.t1.exon5;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . CDS 4623 4769 . - 0 ID=cds.g8972.t1;Parent=g8972.t1 NODE_1800_length_9171_cov_29.5587 . three_prime_UTR 4324 4622 . - . ID=g8972.t1.utr3p1;Parent=g8972.t1 #PROT g8972.t1 g8972 MATPAAPAAPEVKTALNDTDTSGKFKRMDAQFRQWVRADGSTPFTPEADRYHLYISYACPWASRCIAVREIKGLVDVIGLSVVRAKWNTVVASTDAKGWVFNNGDANDEDDATTDTVNGCKTVRDLYLLADPAYGGRFTVPVLWDKKNKTIVSNESSEIIRMFNAEFNAVAKRPEIDLYPAELRGEIDAVNAWVYDSINNGVYKCGFATTQAAYDEAIEELYAGLARAESILSKKRFLAGNRLTEADIRLFVTLIRFDEVYVVHFKCNRATVREYPALFGYIHDIYQTNGIATTVNMTHIKNHYYGSHPQLNPRGIVAAGPNIDHTKPHTRATLP* # PASA_UPDATE: g8973.t1, single gene model update, valid-1, status:[pasa:asmbl_2671,status:12], valid-1 NODE_1800_length_9171_cov_29.5587 . gene 7750 8969 . - . ID=g8973;Name=g8973.t1 NODE_1800_length_9171_cov_29.5587 . mRNA 7750 8969 . - . ID=g8973.t1;Parent=g8973;Name=g8973.t1 NODE_1800_length_9171_cov_29.5587 . exon 8967 8969 . - . ID=g8973.t1.exon1;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . CDS 8967 8969 . - 0 ID=cds.g8973.t1;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . exon 8468 8788 . - . ID=g8973.t1.exon2;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . CDS 8468 8788 . - 0 ID=cds.g8973.t1;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . exon 7750 8050 . - . ID=g8973.t1.exon3;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . CDS 7925 8050 . - 0 ID=cds.g8973.t1;Parent=g8973.t1 NODE_1800_length_9171_cov_29.5587 . three_prime_UTR 7750 7924 . - . ID=g8973.t1.utr3p1;Parent=g8973.t1 #PROT g8973.t1 g8973 MLASESSLVDLNERLERPITLQNFRPNIVVSGGDPFEEDSWRRIRVFRRNVASLSAEASEDDPRPQVKESDHVLLDNVKRCSRCAMPTIDQATGRHDREMQPTKTLRQYRKHGDEVYFGVNLVHVSGPSGVIRVGDSIEVLSWQQPFPT* # ORIGINAL: g1974.t1 original gene structure, not modified by PASA NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS gene 7057 8673 . + . ID=g1974;Name=g1974.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS mRNA 7057 8673 . + . ID=g1974.t1;Parent=g1974;Name=g1974.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS exon 7057 8673 . + . ID=g1974.t1.exon1;Parent=g1974.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS CDS 7057 8673 . + 0 ID=cds.g1974.t1;Parent=g1974.t1 #PROT g1974.t1 g1974 MSNTAATTAAAPSAPVPDHIHYADIDPTKVFGSIKELKPETPNYSRAIVFTERMKIAFTGCRLKGTPKGLEVVFDPSTDEGKAIIQTCNGIRRQIATVVLSNNEAKQVLLANTGLPNTIADEELLECLMENQLNKCLYTISKDGKKGYIKTRVYNERPKAGAAAAENPTDSPTGEVVASNKRTDVKTNCSFYQLMDVRMNEAGEETPVEVINDEEMTLERIDALHHVEIQGGLSVDEMTQRIVMGSYGHIAAGVNYANILGDGNLSCFPILDQVSFIPGTGSPNLNIPFSDDPEENCGYNYWHDVQMSELTHGDAYTKPREIVDEKGNKSTVEMKYITINGGDGGRHAYLIKNCKLRFVNHDKVLGITKCALEVPNDLPFAKFEEEFHDCNLTLLAGNTEIAKNLLSANEMKKPVKERVKSMRLYSKVWRVLCSRANKEGKAVPAKIPSTKIEWGKGMFVAKDPAGNPIKIDASNVDAILCDSRPMDVMLSNTVQANMTKKSSQYSTRIDYARIDITAPVSSGFGRSAYAFAPRAGKK* # ORIGINAL: g1973.t1 original gene structure, not modified by PASA NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS gene 5801 6361 . - . ID=g1973;Name=g1973.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS mRNA 5801 6361 . - . ID=g1973.t1;Parent=g1973;Name=g1973.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS exon 5801 6361 . - . ID=g1973.t1.exon1;Parent=g1973.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS CDS 5801 6361 . - 0 ID=cds.g1973.t1;Parent=g1973.t1 #PROT g1973.t1 g1973 MNDYSVYLPGTKIAFGAVPPQDEVFRLEAKCGVTLFVDLRWEFDEDFEEYDTRTSQRVGFPIRDRNACEVDDQLDALVNRILNNTGKVFIHCQGGHGRSAFVAACVLARMLSQEATFVAPTSKKEADTFASHVLKRIFEIHQQRVNIKPKFKKIGAPQTRSQKDSVQLYVRRYIAVPTSKGFFRCG* # ORIGINAL: g1972.t1 original gene structure, not modified by PASA NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS gene 1132 1932 . + . ID=g1972;Name=g1972.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS mRNA 1132 1932 . + . ID=g1972.t1;Parent=g1972;Name=g1972.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS exon 1132 1932 . + . ID=g1972.t1.exon1;Parent=g1972.t1 NODE_1896_length_8689_cov_43.7974_potentialcontaminant AUGUSTUS CDS 1132 1932 . + 0 ID=cds.g1972.t1;Parent=g1972.t1 #PROT g1972.t1 g1972 MELLLYHIYHITLENAFAETPVDAYTALRNVEDVQRMLIREPTRSYEDCLRSCGIKHIVDIDGSCEKCDKKLIPAWSHAVRRRVKHGLLKIDFDLDHAEGIPVTYTSDEMEGDLEILLYSDIWTLGTFVRLDFVNAQGKGGQVVITHSDDYVRATVGDLEIEFSKYDVDKQIELYVAIRNDGFFYPRFHWTNPIIKKVSRAERVWNAFDDMIETIHANLARGDKLLINGNPSDNAYQFGAEVELTLASTVYSRYYITNSDSDTSEH* # PASA_UPDATE: g357.t1, single gene model update, valid-1, status:[pasa:asmbl_1825,status:12], valid-1 NODE_1511_length_10814_cov_75.0701 . gene 716 8939 . + . ID=g357;Name=g357.t1 NODE_1511_length_10814_cov_75.0701 . mRNA 716 8939 . + . ID=g357.t1;Parent=g357;Name=g357.t1 NODE_1511_length_10814_cov_75.0701 . exon 716 8939 . + . ID=g357.t1.exon1;Parent=g357.t1 NODE_1511_length_10814_cov_75.0701 . CDS 716 8605 . + 0 ID=cds.g357.t1;Parent=g357.t1 NODE_1511_length_10814_cov_75.0701 . three_prime_UTR 8606 8939 . + . ID=g357.t1.utr3p1;Parent=g357.t1 #PROT g357.t1 g357 MQRFFCRSRARACGRSDGAIVVGGLRHVAVCLVALLMLQSPWAVLSACPGRSVLTEASGVIASGGAFYHTASTCEWLINATAIAPRAAIVLDFIFSMTECNYDYVFVFDGPSYASAKQLAVVTGDGLTSSPASTPSPIVSTTGYMLVLLFSDPAYVRKGINATYRIVSCPDDCGAASGWGTCLAGSCQCNATRATASCGIAACVDNCNADKGWGTCDPVMSSCACVDGHGGANCSDTAPSASVGGWYSRRLGARVLGRASHTAVLFKSPERTVVFGGYSLSDGVLSDLAVFEYATGVTTHIRGANQSWPSARYGHAAAAIDNADGSSRGMLVCGGTDAALDLMQSSWMLDAGSLQWTRKADMPVNVSFHSANYVRGVGVIVYGGKSYFGPHTGQMWRYDVDRDAWSEMPQYGAVPSGVAAHVSVYVAAMDALVIHGGVRFGSSGDPVGDLYLYRLSTGVWTTIAGTLPTGGGPRGRFLHSAALWSSGGANATVRLFIYGGMVHNSYSLPWSTDGDEECQAMDSFVYDFACNSWTRVPAAEMSASPPLPNASEASVAHSLWMDPLLDAAFRTPSPRRFGSAAVARANGEIVIIGGYAGVMQADVSSLRLPPYDLAATCPSRESLASCASGDGACSWCPALTTNATSVCAGVGSAAVQTCGGGGAQSLCGSLCASLVTCQGCASVRGCNWCPSSQKCARATIGCPSDAAPAVVSLAECATALQSNSATDGGPLTARELYAVPADSAHSVLVLISAPFFGTRAFATVRVGGAAVPRGSLDSSQAPANTDWWGERFRATFIAQTTGNYSFHFAIDGIALLFVRATAVATSDMLAALATASADGSQPVDPAQLWPAYYANPTVDVSEGSSSLAVGNAKWRAVSPPVVLAQGDTCVIETLRLTAGASGLLSVGWSKTDADGVVPAVPTAVVSGVNVVAYVNPFPDRVCPTALNCRTCVADAGCSWCGGLGGLCVARDNATACAGAVSTTEEDACPTCLALSGGGCEECNTYTSCQWRTGYCEDVTTELANNAGSAVTRGSPAACGLRFSCPAHADGGCDSCLATPGCMWCERFDGTGACGHIDGYVSSMYAGMCARWMFGQMSCGSCEALGDCVSCSQLRGCGWCYDPVDPRRGKCVRGDFAGASPANNATCAAAVGDPSAGFAYAMCPDIDECALGLHNCNDITNSHCTNTVGGFTCTCNTGYEADASGGCAPVCDACANGTCVAPNTCVCRLGFTGPNCGVDCGCNGNSVCTAVGVGTCDLCQRNTTGRACDRCAPGFYGNARNGTCRACACNGHADAAKGYCNATTGDCECAEGYAGAGCSLCQTNFVGSGVNGGTCYSLCDSRKMLTGQTGGIGTVSTYAAKSTCQWLIMPDNAGAVRLTVQRFATECSYDYLFVYDGVSAQSPLLAALSGPALSNYEKELVTTGPAALVVFYSDVDFTLDGFRISYEALACPSNCSYSAQRGVCQVATRTCVCGALWKGPACDQLRCPDSCGVALGRGRCVPDVGCVCTRGYAGPSCSFTVTDGVWYAATTHLLSPERGGHSAVYVASSPERIVVFGGLSLRLGALGDLAELNLETGLWTNFGTQSPPSSPGPRFQHSAVVIGGNMYVFGGVRAGASYATDNRLYAMNLTTRIWTIVTTQGDTPVALSGHGAFASGANMYVVGGFLGTVGLTTRVSEFNTNTGRWRRLYPAGYPSMSSYGAAVAFDPVHRVAFVYGGVRAQGLTSSTKVSSLVFRFELPSADGDHGRWGSVLQSGATGRALGAMVYVPATSAGTEAYFVAFGGSSFDHNTAATTSCYASDLAVFDPDCEKFFAASLSTPSILPVVSSAAIGRQSHAVVSGANRTVYVVGGFNGVSRGDVVAMRLPATPCSLSPSACLAGACVQIAPDCTDFNSCADCVSYAKIKNCQWCDGRCRAVTQPASSTCRATCSECTARFGCNDCFDNSAYLLAGVTPVCQWTSGGSSGAFCGTLTPSAVDPNAASRYCVSPCSTRSSCSACTTGGGNCAWCENMGACLDFNVYTAAQGMGQCRSWQDENRGCSVDCGATKTCGGCLGSGRCGWCAGGVGPSRGVCAQGDYSGPLSSTCGQNSTWAYAACPDEDECALGTNECDPISTTCTNTPGSYRCTCRDGYKQSGASSTACVAVCKTPCANNGLCVAPDTCNCTVGFYGADCSLDCGCNGHSNCTLGPGKCDKCMHNTIGPRCETCAPKSYGNATKGGVCTPCVTKCNGNSDECSSVTGECINCRNNTSGSSCEVCDSGYTRFSAGTPGLCVPCDCNGHATTCDAVSGTCACTPESKTTGKDCSKCLQGYSGNPIDGRQCFFVMAKGDLGSAFKVKARERRYFVIRPHYTNVDIRVTVDVLSGAVLNLLSPDDTDALATAIASPANRIIRKRDLVIRYRDYDLLRQMFYLTVEADKDSEFMVYYTQSVSQIDLFVFFSVFFACFFLFLSVIILAWRVKMRYERHQAVVRRGVELQSMARRPMGLITVILSDSLDRPHTTRFTGTPWATVGAFLVGASPDPFEAYRAAVAAAGIVPASLQFTEDGRCAVASAIVELPAPGPGCARTIAVGTTLMSVGPATRRLWDKSKEEGEEREGGAREERESEGAETTLGTAVRDEIVVVPSARLQIVDN* # PASA_UPDATE: g10689.t1, single gene model update, valid-1, status:[pasa:asmbl_5569,status:12], valid-1 NODE_3105_length_4301_cov_41.1789 . gene 161 1884 . - . ID=g10689;Name=g10689.t1 NODE_3105_length_4301_cov_41.1789 . mRNA 161 1884 . - . ID=g10689.t1;Parent=g10689;Name=g10689.t1 NODE_3105_length_4301_cov_41.1789 . five_prime_UTR 1757 1884 . - . ID=g10689.t1.utr5p1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 1714 1884 . - . ID=g10689.t1.exon1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 1714 1756 . - 0 ID=cds.g10689.t1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 1514 1598 . - . ID=g10689.t1.exon2;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 1514 1598 . - 2 ID=cds.g10689.t1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 1134 1209 . - . ID=g10689.t1.exon3;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 1134 1209 . - 1 ID=cds.g10689.t1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 927 1019 . - . ID=g10689.t1.exon4;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 927 1019 . - 0 ID=cds.g10689.t1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 417 543 . - . ID=g10689.t1.exon5;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 417 543 . - 0 ID=cds.g10689.t1;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . exon 161 213 . - . ID=g10689.t1.exon6;Parent=g10689.t1 NODE_3105_length_4301_cov_41.1789 . CDS 161 213 . - 2 ID=cds.g10689.t1;Parent=g10689.t1;3_prime_partial=true #PROT g10689.t1 g10689 MDLFTFTTPLDKLLEKATSDALLEPDWAINLQICDAVRAKEVSAKDLGKSLRRRLGSKNPNVVLLAITVLETAVKNCGQPMHEEISAKPFLDDLKEIAKAPSQPEKVRTRVLELVQVWAHAFRNEPGYRNVIDAFNSLKADGCVFPALREADAMFTSEK # PASA_UPDATE: g10690.t1, single gene model update, valid-1, status:[pasa:asmbl_5568,status:3], valid-1 NODE_3105_length_4301_cov_41.1789 . gene 2270 3088 . + . ID=g10690;Name=g10690.t1 NODE_3105_length_4301_cov_41.1789 . mRNA 2270 3088 . + . ID=g10690.t1;Parent=g10690;Name=g10690.t1 NODE_3105_length_4301_cov_41.1789 . five_prime_UTR 2270 2314 . + . ID=g10690.t1.utr5p1;Parent=g10690.t1 NODE_3105_length_4301_cov_41.1789 . exon 2270 2439 . + . ID=g10690.t1.exon1;Parent=g10690.t1 NODE_3105_length_4301_cov_41.1789 . CDS 2315 2439 . + 0 ID=cds.g10690.t1;Parent=g10690.t1 NODE_3105_length_4301_cov_41.1789 . exon 2697 3088 . + . ID=g10690.t1.exon2;Parent=g10690.t1 NODE_3105_length_4301_cov_41.1789 . CDS 2697 3054 . + 1 ID=cds.g10690.t1;Parent=g10690.t1 NODE_3105_length_4301_cov_41.1789 . three_prime_UTR 3055 3088 . + . ID=g10690.t1.utr3p1;Parent=g10690.t1 #PROT g10690.t1 g10690 MSYAEICETVLVPAHIDAVFDFYTDHVGWPAWTSAGSVALEKEGTPNKNGVGCIRAITTAGVFTVREEVLTFERPHNMTYRVLSGMPVMSDHLGEVAFEECDVDGANGEKKRGTRIVWKCRFLATFGFGWAVVPVARNFFRSALDNLAAKFAAEQAQSTN* # PASA_UPDATE: g10691.t1, single gene model update, valid-1, status:[pasa:asmbl_5570,status:12], valid-1 NODE_3105_length_4301_cov_41.1789 . gene 3144 4192 . - . ID=g10691;Name=g10691.t1 NODE_3105_length_4301_cov_41.1789 . mRNA 3144 4192 . - . ID=g10691.t1;Parent=g10691;Name=g10691.t1 NODE_3105_length_4301_cov_41.1789 . exon 4168 4192 . - . ID=g10691.t1.exon1;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . CDS 4168 4192 . - 0 ID=cds.g10691.t1;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . exon 3986 4049 . - . ID=g10691.t1.exon2;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . CDS 3986 4049 . - 2 ID=cds.g10691.t1;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . exon 3773 3851 . - . ID=g10691.t1.exon3;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . CDS 3773 3851 . - 1 ID=cds.g10691.t1;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . exon 3144 3464 . - . ID=g10691.t1.exon4;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . CDS 3288 3464 . - 0 ID=cds.g10691.t1;Parent=g10691.t1 NODE_3105_length_4301_cov_41.1789 . three_prime_UTR 3144 3287 . - . ID=g10691.t1.utr3p1;Parent=g10691.t1 #PROT g10691.t1 g10691 MAYAQEVSNCFSTNELITYEALGLAEEGKGANLIDSGDVTYGGKWVVNPSGGLISKGHPLGATGLAMCAELNWQLRGLADKRQVPNATVGVQHNLGLGGACVVGVYRRDGKFGN* # ORIGINAL: g8815.t1 original gene structure, not modified by PASA NODE_3444_length_3448_cov_85.2911 AUGUSTUS gene 141 3355 . - . ID=g8815;Name=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS mRNA 141 3355 . - . ID=g8815.t1;Parent=g8815;Name=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 2456 3355 . - . ID=g8815.t1.exon1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 2456 3355 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 2101 2201 . - . ID=g8815.t1.exon2;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 2101 2201 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 1817 1874 . - . ID=g8815.t1.exon3;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 1817 1874 . - 1 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 1289 1462 . - . ID=g8815.t1.exon4;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 1289 1462 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 1088 1162 . - . ID=g8815.t1.exon5;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 1088 1162 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 804 908 . - . ID=g8815.t1.exon6;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 804 908 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS exon 141 328 . - . ID=g8815.t1.exon7;Parent=g8815.t1 NODE_3444_length_3448_cov_85.2911 AUGUSTUS CDS 141 328 . - 0 ID=cds.g8815.t1;Parent=g8815.t1 #PROT g8815.t1 g8815 MPSNKRKRGADLPSTTATEGDDAQQQKIKTHFDDVASRAVGATAPPSSKRKRAQAVVSASADCDINEGGRSKRQQKQKPNLSLYVGYVEDDENIEAIMARFSRLEEYQQQQQQPTPPVAVDGGNGLKSSQTAVEPKGASAEEEPALSEADLQRLYGLSHEKVALLDAPANNVGFSPKRKGTDPAGELVEDFNAGEDNEPYAVIDRYIPVVDGVNGEYIMSKMQTKKAVKCGGKCCGAPESMIGTEDLFPLLATPAENGACACRTERAECGPNCGCAKTGHCRNRGIQNGAHIIVGKDCVELPLVGIDAFTRDKLWSFLPTEWDDATKAAFVERRIIPAIHARCVGNEKPGLMQTMEEMAKARKASPEVADVARSVVEKMKQEGGSRVFKTHPKGRGVLCTTADGIAKDTYLGCYIGEIYPPWRWFEKEDAGNNVRKAVGQDELPIFYNIMLERHANDAAGYDVMFVDPKRKGNPITRFSHSCDPSAYTTVVASGGSFQVAVYAARDICFGEEITFDYMCRTDDIAEIEKAICL # ORIGINAL: g2305.t1 original gene structure, not modified by PASA NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS gene 3349 4017 . + . ID=g2305;Name=g2305.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS mRNA 3349 4017 . + . ID=g2305.t1;Parent=g2305;Name=g2305.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS exon 3349 4017 . + . ID=g2305.t1.exon1;Parent=g2305.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS CDS 3349 4017 . + 0 ID=cds.g2305.t1;Parent=g2305.t1 #PROT g2305.t1 g2305 MINSTKAVLQIVDADWTNRAITALVEPNKLKDAIEALTASIAGSGFVASIDAHRRIDELREQSLRQAVQLNDQLQRARAKEAAREINNILSGRYPDNGVLVLIESVERDPSLIDELLCGKVSAEKLSEWKLQAQITAVWTAGERARSRVLREFGPVPANVPDSVADKAASKFAIGAEFDAAVAAHVPANILQDVVTDTTTVGEFLIAYANRRVSNFSPKFTH* # ORIGINAL: g2303.t1 original gene structure, not modified by PASA NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS gene 1555 2480 . + . ID=g2303;Name=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS mRNA 1555 2480 . + . ID=g2303.t1;Parent=g2303;Name=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS exon 1555 1587 . + . ID=g2303.t1.exon1;Parent=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS CDS 1555 1587 . + 0 ID=cds.g2303.t1;Parent=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS exon 1672 1841 . + . ID=g2303.t1.exon2;Parent=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS CDS 1672 1841 . + 0 ID=cds.g2303.t1;Parent=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS exon 1919 2480 . + . ID=g2303.t1.exon3;Parent=g2303.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS CDS 1919 2480 . + 1 ID=cds.g2303.t1;Parent=g2303.t1 #PROT g2303.t1 g2303 MTKNDGRLGCVGIRRFVSVDLRAGFYNRLSALVVVCLLCQAKGVNACPDTCTCNGETVLSCAFPTETFALGHEASADTIANPANADNCARDDAPDERVKEAIDILIAAFHTKPNITECSKNGVDKARDETRKAACVATCHEDFTSKMWKTGLLTSVLGGTVAVGATVTGPALLAWIGFTTSGVAAGSFAATAQSYLYGGFASGIFSSFQAVGAVGALPLTTAMIIVIVASSGAAGSFAAFVVGPTCENECQCVA* # ORIGINAL: g2304.t1 original gene structure, not modified by PASA NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS gene 2902 3237 . + . ID=g2304;Name=g2304.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS mRNA 2902 3237 . + . ID=g2304.t1;Parent=g2304;Name=g2304.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS exon 2902 3237 . + . ID=g2304.t1.exon1;Parent=g2304.t1 NODE_3073_length_4396_cov_44.0461_potentialcontaminant AUGUSTUS CDS 2902 3237 . + 0 ID=cds.g2304.t1;Parent=g2304.t1 #PROT g2304.t1 g2304 MAGRSATLAPEDQELIKEIDKLLNKLKGEWTTVSSAGVIQATVTAATVAEVVINVTSSILKRLEWLGPIVGAASASVSAVHYFFEQNQLAKTALSRVLFIWNTGNLLNAQE* # PASA_UPDATE: g999.t1, single gene model update, valid-1, status:[pasa:asmbl_2035,status:3], valid-1 NODE_1582_length_10361_cov_39.7153 . gene 1952 3327 . - . ID=g999;Name=g999.t1 NODE_1582_length_10361_cov_39.7153 . mRNA 1952 3327 . - . ID=g999.t1;Parent=g999;Name=g999.t1 NODE_1582_length_10361_cov_39.7153 . five_prime_UTR 3249 3327 . - . ID=g999.t1.utr5p1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . exon 3102 3327 . - . ID=g999.t1.exon1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . CDS 3102 3248 . - 0 ID=cds.g999.t1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . exon 2739 2916 . - . ID=g999.t1.exon2;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . CDS 2739 2916 . - 0 ID=cds.g999.t1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . exon 2380 2480 . - . ID=g999.t1.exon3;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . CDS 2380 2480 . - 2 ID=cds.g999.t1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . exon 1952 2194 . - . ID=g999.t1.exon4;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . CDS 1967 2194 . - 0 ID=cds.g999.t1;Parent=g999.t1 NODE_1582_length_10361_cov_39.7153 . three_prime_UTR 1952 1966 . - . ID=g999.t1.utr3p1;Parent=g999.t1 #PROT g999.t1 g999 MLATLSRLSARPTAAARIRSQIVGIRRSYTSESDRSEFARKTGPIANSAKFREFFEQNIPFNTVLGMKIISLERRHCAITVPFKPSLIGDPFRGALHGGVLSALADATGGLAVMGTLDDLEARVATIDMRIDYLRPGLQEELTCTADIRRIGNRVATTSMRISQREGQYVVCEGRAVYNVSYPRDKRASNHPASSGAGGRPGDQDVHSKNDNPGRSS* # PASA_UPDATE: g998.t1, single gene model update, valid-1, status:[pasa:asmbl_2034,status:12], valid-1 NODE_1582_length_10361_cov_39.7153 . gene 1 1545 . - . ID=g998;Name=g998.t1 NODE_1582_length_10361_cov_39.7153 . mRNA 1 1545 . - . ID=g998.t1;Parent=g998;Name=g998.t1 NODE_1582_length_10361_cov_39.7153 . five_prime_UTR 1509 1545 . - . ID=g998.t1.utr5p1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . exon 1410 1545 . - . ID=g998.t1.exon1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . CDS 1410 1508 . - 0 ID=cds.g998.t1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . exon 1240 1296 . - . ID=g998.t1.exon2;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . CDS 1240 1296 . - 0 ID=cds.g998.t1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . exon 786 949 . - . ID=g998.t1.exon3;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . CDS 786 949 . - 0 ID=cds.g998.t1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . exon 291 373 . - . ID=g998.t1.exon4;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . CDS 291 373 . - 1 ID=cds.g998.t1;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . exon 1 28 . - . ID=g998.t1.exon5;Parent=g998.t1 NODE_1582_length_10361_cov_39.7153 . CDS 1 28 . - 2 ID=cds.g998.t1;Parent=g998.t1;3_prime_partial=true #PROT g998.t1 g998 MSSDSESGSSSSGAGEKKHTHKGSKKGKMGKNKYGGGGYGGGALNAFIAFKERAEANAPLFPDTDAASDLLKTIGEDKKWTAEQMEADIAILTKNRLQTIADLRSLSDESWKSLEFLPLVKDLLREAIGKKKGAAPAEGAETS # ORIGINAL: g1000.t1 original gene structure, not modified by PASA NODE_1582_length_10361_cov_39.7153 AUGUSTUS gene 3856 8862 . - . ID=g1000;Name=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS mRNA 3856 8862 . - . ID=g1000.t1;Parent=g1000;Name=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 6372 8862 . - . ID=g1000.t1.exon1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 6372 8862 . - 0 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 6038 6163 . - . ID=g1000.t1.exon2;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 6038 6163 . - 2 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 5714 5818 . - . ID=g1000.t1.exon3;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 5714 5818 . - 2 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 5386 5555 . - . ID=g1000.t1.exon4;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 5386 5555 . - 2 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 5041 5221 . - . ID=g1000.t1.exon5;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 5041 5221 . - 0 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 4736 4894 . - . ID=g1000.t1.exon6;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 4736 4894 . - 2 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 4474 4582 . - . ID=g1000.t1.exon7;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 4474 4582 . - 2 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 4236 4326 . - . ID=g1000.t1.exon8;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 4236 4326 . - 1 ID=cds.g1000.t1;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS exon 3856 4071 . - . ID=g1000.t1.exon9;Parent=g1000.t1 NODE_1582_length_10361_cov_39.7153 AUGUSTUS CDS 3856 4071 . - 0 ID=cds.g1000.t1;Parent=g1000.t1 #PROT g1000.t1 g1000 MGSRRAASRSPLARAFYTYGERCAAHPYEIIAIIVLLVSVCAVPFLHSTVDFQRPKPLRLFATTSTNESAPESSASASSHASASVLRVERVVISSDREGQFEGPGMLTAGNMNRVREFERDVLNARVSVEGNWYSLVDVCHKPAGSQACYTASPLDWTHNEDRLYASDAEVLVSLQSASSVGVSGEKVLRSSVLRGARFDAGEGQLTGATSIVLTYFFRTDDAVSLHAYRLWESILSNAAKKGTWSVHRNTVAFGSETMRVYYWDADALSSDVLALITCNCITILYTYFMFSKLWRLGSKYVLGITGVLTVAGSFVATFAVFKLFRMHIQLALSEAMPFLFFVIGFENVHLVAKRAISRKTMTVSEAVASSLAESAPSLTADAAIKTLVLGMGSMSGVARMDHICLFGAFSVVANYALFMAAFPAALAITLKVLRSRTDASTAARDESATDQTTAPRNPTHTNTTASSASGTLSGSSSSSSKKGVDPELQNISQALREYDGASADADANPTVERFKLIAIFGLLALHAANAFAAAAISPASLSVDPEIATLMKLAAVEGSHLEYGPATHLTLRSEYLGTYSGVRAVMDVCKSFSMPSPICAGLVDVVAVAGEWIDGEVILLAIAMLLVGTLVLKYALVDAKPDTQMSRPQSADSLAEAEAEAEAEAAPSHAVSQSAPQAAATILSSAPATVRAVPAPVPEKVTPTLSSASAQASSERTSAAGLVTGRRPSVRFSIGGDGSENNLSAIAAIAERAEAVGAESNSPVCDLFEQEIRPKTIEEIKAIYDFSGAVALTDDEIIQLVDAKTLQAYNLEKSLNDLQRGVVIRRKFMARSVAKNTAFEELPYLHYDYSKVMGACCENVVGYIPLPVGLAGPVLIDNRNVTIPMATTEGCLVASTHRGCKALTEGGGVFTYLLNDGMTRGPVVRLPCAGRAAALKLFLDSVDGFKEVKEAFDSTSRFARLKDLHVAIAGRLVYIRVRTATGDAMGMNMISKGTEKALDLLHSKFTDMETISLSGNYCTDKKPAAINWIEGRGKSIVAEAVVPGAVVKTVLKTTVPALIELNISKNLIGSAMAGSIGGFNAHAANIVTAIFLATGQDPAQNVESSNCMTLMESCNDGNDLRISVTMPSIEVGTVGGGTVLPAQSACLDMLGVRGAHPTNPGENASNLARVVAAGVLAGELSLLSALAAGHLVKSHLTHNRSSQNLAVSGSCIKS* # ORIGINAL: g12190.t1 original gene structure, not modified by PASA NODE_3456_length_3426_cov_36.3945 AUGUSTUS gene 1016 2199 . + . ID=g12190;Name=g12190.t1 NODE_3456_length_3426_cov_36.3945 AUGUSTUS mRNA 1016 2199 . + . ID=g12190.t1;Parent=g12190;Name=g12190.t1 NODE_3456_length_3426_cov_36.3945 AUGUSTUS exon 1016 1332 . + . ID=g12190.t1.exon1;Parent=g12190.t1 NODE_3456_length_3426_cov_36.3945 AUGUSTUS CDS 1016 1332 . + 0 ID=cds.g12190.t1;Parent=g12190.t1 NODE_3456_length_3426_cov_36.3945 AUGUSTUS exon 1911 2199 . + . ID=g12190.t1.exon2;Parent=g12190.t1 NODE_3456_length_3426_cov_36.3945 AUGUSTUS CDS 1911 2199 . + 1 ID=cds.g12190.t1;Parent=g12190.t1 #PROT g12190.t1 g12190 MTAADDEAVEISALRTDEHNVKGLAVFSVFITLILFAASAVFFYFSVRGTGLKYRRPHGKYGSAPERSNLAGMAACITAVVWFARATDHILLANGVMASFPVKNYRYYNYLISAPMLVLDICTVTEQPFKWSYTILTAITMFLGILAVNTGQPVSGESYAYFALGCCVFSILYSNFFKNIYLRVRYYPKHLQFYLKAAMVC* # ORIGINAL: g14333.t1 original gene structure, not modified by PASA NODE_1533_length_10652_cov_38.0877 AUGUSTUS gene 143 8796 . - . ID=g14333;Name=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS mRNA 143 8796 . - . ID=g14333.t1;Parent=g14333;Name=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 8686 8796 . - . ID=g14333.t1.exon1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 8686 8796 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 8460 8536 . - . ID=g14333.t1.exon2;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 8460 8536 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 7979 8286 . - . ID=g14333.t1.exon3;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 7979 8286 . - 1 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 7129 7817 . - . ID=g14333.t1.exon4;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 7129 7817 . - 2 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 6675 6863 . - . ID=g14333.t1.exon5;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 6675 6863 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 6243 6470 . - . ID=g14333.t1.exon6;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 6243 6470 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 5810 6001 . - . ID=g14333.t1.exon7;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 5810 6001 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 5439 5480 . - . ID=g14333.t1.exon8;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 5439 5480 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 5142 5264 . - . ID=g14333.t1.exon9;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 5142 5264 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 4838 4966 . - . ID=g14333.t1.exon10;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 4838 4966 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 4324 4488 . - . ID=g14333.t1.exon11;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 4324 4488 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 3854 3976 . - . ID=g14333.t1.exon12;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 3854 3976 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 2703 3454 . - . ID=g14333.t1.exon13;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 2703 3454 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 2163 2408 . - . ID=g14333.t1.exon14;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 2163 2408 . - 1 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 1887 1974 . - . ID=g14333.t1.exon15;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 1887 1974 . - 1 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 1499 1578 . - . ID=g14333.t1.exon16;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 1499 1578 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 1001 1196 . - . ID=g14333.t1.exon17;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 1001 1196 . - 1 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 620 780 . - . ID=g14333.t1.exon18;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 620 780 . - 0 ID=cds.g14333.t1;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS exon 143 287 . - . ID=g14333.t1.exon19;Parent=g14333.t1 NODE_1533_length_10652_cov_38.0877 AUGUSTUS CDS 143 287 . - 1 ID=cds.g14333.t1;Parent=g14333.t1 #PROT g14333.t1 g14333 MAATSTLAGTCHGCTALSAEVAVLKESAAFMNEKISQLLEMATESQDAIVKLNSALAVLNLEREANHRLNPAHHDALEHEPNEDDNDDEDEDDEDEDAGVDGALDAQGKEGADVVEGITILTNKGGKLELQARVPESLYKEAELNFTTHFTPKGSTKGTSSSVFAANEAVSYLVTHLRITRHRAVQIGRLMVDRKVIVRVEDKSDDSGFSDDKTLFRFSDSEEFLVLDVAPGGHVFRTVDILRPSVCDVCLQMMWLGQVDECANCHMRCHLRCMVNAPAFCPKTIEFDRKKATEDEEFAVNDASDVHAPHGADEFASIQHNPMVLPPTAVMPSEAGSPNKWTIAPPADAHPVVVFVNRKSGGQEGARVISVLEKCLHACQIWDLSQGGPRPGLLQFKNVPHHFVLACGGDGTVGWVLSEIQKVDYGSGSPPPVAILPLGTGNDLSRVMGWGPSAPNLKSSKQMLETLYQMCCADIVVLDRWAVAIAEKASDAEHATHTPQQLMMINYLSFGVDAKIALSFHRSRESNPQRFKHQVMNKLWYVAFSAKAMMNGDKPLNKRVSLEIDGRKIDFASDLEAVILLNIHSYAAGTNPWGRKQQDGYADQDFGDGLVEVVGIKGVSHMGRIQAHLSSGRRIAQGRHIVLTVIDDSLPMQVDGEPWLQPPAVINVALAGKSKMLRLAEKRDRFQADFGVADLSPEKADQIAIDFLRGVPVKERKVLGVGPKERVFVGSEAVDWLMFHLKTDDRVRAWKVGQVMMEMGVFRSVSGKRKHFRDQDVLYKFNNVRVDVCDAYDSERFSFTSTTSMASSTFGQGSAVEALADDDVRSILRHVIISSRSSTTHIDDISDASSPSLRSTSFASIDTVDEYPNEVEEEAAMTNAVADAKVGIPVDGGRPPATRVGDRYLGQSLAGRSSITATAVDSALAVVAAEINAMPIDAARAWLKREAEASAEVRIAVEKFASAVTASGASAGIIESSGSLAGPSGSASRSASGSIVGSAGEHDAARDSADSTITCPTPPDDRRRTSSSALRSGSDLEFVDIIPRQSIRTDNSSFVGHLRVTVLEGRDLHSDDSVDPYLIVECDHEIFKSRVVKRTRNPVFGEEFHFFVTRSNAMISITALDRRSTITSFDAEKGFLGRMRLPVSSIDSCHRSDKWVPLIPYRDKSVGVRLTGSLRLVTEYSLLNGSVDHGVSLGPEPFVPPGEPSGGFKGVMTTLSQANHACCAFNNIIVLGENGTFRSTAYRNEESSADEPPNDIMMEGRFEYFTKAMVFENVDVYVQPAHATPPAWQSIGVSKTNGSGQVAVALPKSFTAIPAHVRVRMVALHDHSFAAGSVFLLQKGGIEVACK* # PASA_UPDATE: g14334.t1, single gene model update, valid-1, status:[pasa:asmbl_1891,status:12], valid-1 NODE_1533_length_10652_cov_38.0877 . gene 9339 10625 . + . ID=g14334;Name=g14334.t1 NODE_1533_length_10652_cov_38.0877 . mRNA 9339 10625 . + . ID=g14334.t1;Parent=g14334;Name=g14334.t1 NODE_1533_length_10652_cov_38.0877 . five_prime_UTR 9339 9394 . + . ID=g14334.t1.utr5p1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . exon 9339 9475 . + . ID=g14334.t1.exon1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . CDS 9395 9475 . + 0 ID=cds.g14334.t1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . exon 9694 9820 . + . ID=g14334.t1.exon2;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . CDS 9694 9820 . + 0 ID=cds.g14334.t1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . exon 10067 10082 . + . ID=g14334.t1.exon3;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . CDS 10067 10082 . + 2 ID=cds.g14334.t1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . exon 10250 10310 . + . ID=g14334.t1.exon4;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . CDS 10250 10310 . + 1 ID=cds.g14334.t1;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . exon 10509 10625 . + . ID=g14334.t1.exon5;Parent=g14334.t1 NODE_1533_length_10652_cov_38.0877 . CDS 10509 10625 . + 0 ID=cds.g14334.t1;Parent=g14334.t1 #PROT g14334.t1 g14334 MWKADAGAKLNVAKSADDDWDTDPDFVNDVSEQEQRWGSKAIAGSGKQEAMDLATIRNQTKEAHAQNTQEEYKKKGTFAAGYGGQFGVMSDRMDKSAVGHDYQHQKEQHTSTKFNQGYGGTHGVMTDRVDKVG* # ORIGINAL: g3001.t1 original gene structure, not modified by PASA NODE_4599_length_1416_cov_72.9157_potentialcontaminant AUGUSTUS gene 14 790 . - . ID=g3001;Name=g3001.t1 NODE_4599_length_1416_cov_72.9157_potentialcontaminant AUGUSTUS mRNA 14 790 . - . ID=g3001.t1;Parent=g3001;Name=g3001.t1 NODE_4599_length_1416_cov_72.9157_potentialcontaminant AUGUSTUS exon 14 790 . - . ID=g3001.t1.exon1;Parent=g3001.t1 NODE_4599_length_1416_cov_72.9157_potentialcontaminant AUGUSTUS CDS 14 790 . - 0 ID=cds.g3001.t1;Parent=g3001.t1 #PROT g3001.t1 g3001 MIGRTLKGKERALKTEPAERTSDASASPAAPANGRVAGAELSGRGQQTITTGETFSAGRAAGYHNSRTPLAGASASDPIKIDVAEPESANGCATNESPDYGDQMGADLSDTDPPSLQALGFNPHLAASMEAGCRIQRAAAAGQHFQLLYHRARDQLPAGMDADEKDSDESAGAARDPVLRAPQQRSQLVASFDVGERNLAFATLKVSAEPLADAAGDAVAQARQQIPARIPHCTLMAWEKVDLELPEQVTLADMAAHIM # PASA_UPDATE: g3952.t1, single gene model update, valid-1, status:[pasa:asmbl_4949,status:12], valid-1 NODE_275_length_28534_cov_40.9601 . gene 17906 19356 . - . ID=g3952;Name=g3952.t1 NODE_275_length_28534_cov_40.9601 . mRNA 17906 19356 . - . ID=g3952.t1;Parent=g3952;Name=g3952.t1 NODE_275_length_28534_cov_40.9601 . exon 19198 19356 . - . ID=g3952.t1.exon1;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . CDS 19198 19356 . - 0 ID=cds.g3952.t1;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . exon 18531 19046 . - . ID=g3952.t1.exon2;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . CDS 18531 19046 . - 0 ID=cds.g3952.t1;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . exon 17906 18168 . - . ID=g3952.t1.exon3;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . CDS 17956 18168 . - 0 ID=cds.g3952.t1;Parent=g3952.t1 NODE_275_length_28534_cov_40.9601 . three_prime_UTR 17906 17955 . - . ID=g3952.t1.utr3p1;Parent=g3952.t1 #PROT g3952.t1 g3952 MPFSYHSHSGQFCMHAAGDLESVVTMAIELGFTHYGLSEHMPRYEECDLYDEERCKGVPHLQEQFEAFVNLARQLQAKYADRIHLLVGMETEYLRDASVEQTAALVVKHNLDYLVGSVHHVHGIPIDYSPELYAEAELKAGGTEALFLAYFEHQKEIIGRIKPLVIGHFDVIRMYRPDFPLTPAVVEAARRNIAMAVSYGAIFEINSRALKKKLPNPYPQADLLKLIVEMGGKVTLSDDSHGPNDVGMFYGPLYEYLVSLDLSRVHFVERGDITQPVRVLTLDDWKAHPFWAAFR* # PASA_UPDATE: g3953.t1, single gene model update, valid-1, status:[pasa:asmbl_4950,status:12], valid-1 NODE_275_length_28534_cov_40.9601 . gene 19963 22852 . + . ID=g3953;Name=g3953.t1 NODE_275_length_28534_cov_40.9601 . mRNA 19963 22852 . + . ID=g3953.t1;Parent=g3953;Name=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 19963 20128 . + . ID=g3953.t1.exon1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 19963 20128 . + 0 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 20280 20394 . + . ID=g3953.t1.exon2;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 20280 20394 . + 2 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 20578 20778 . + . ID=g3953.t1.exon3;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 20578 20778 . + 1 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 21048 21120 . + . ID=g3953.t1.exon4;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 21048 21120 . + 1 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 21331 21470 . + . ID=g3953.t1.exon5;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 21331 21470 . + 0 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 21649 21734 . + . ID=g3953.t1.exon6;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 21649 21734 . + 1 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 21898 22493 . + . ID=g3953.t1.exon7;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 21898 22493 . + 2 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . exon 22611 22852 . + . ID=g3953.t1.exon8;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . CDS 22611 22814 . + 0 ID=cds.g3953.t1;Parent=g3953.t1 NODE_275_length_28534_cov_40.9601 . three_prime_UTR 22815 22852 . + . ID=g3953.t1.utr3p1;Parent=g3953.t1 #PROT g3953.t1 g3953 MPGIETVNPSAVAAVVPEVDDGTPRITPKYLRQLCKDQKLYTTPELNDKLYLHFKGFLKIENLEAYTGLRALWLEGNGLQKIENISGLKELRCLYVHQNLIDHIDGLDGLEHLDSINLSNNIITKIDHLANVPNLSTLHITHNRVATKDDVKGLLECPSLKVVDLSHNKIADPEALDVFEAMPNLAVLMLVGNPVIGKTEHYRKRMISRIKTLTYLDDRPVTEKERLCAEAWAEGGLDAERAARDLYTQKEKDKMNRGFKYLSDLQEQARLRREAEAPSVESPTNVDAVEDVKEAPKQHMHIEVATESLPIIKPSVPIAAAAEQEEEIEENIIVERDTRPIRAGNIAFSHAGGLSHAPSTTTAAPAAPASTTPAPAQSSRVMQSPADLFRAPAAGVPANKTEAAFGKAARDGRPLIMEIDAEEEQTFLSFGNSTDPSVETAAKKTGPLIQEVGVPEVIKASHVDDDEVPDLDDVIQVSDALLPGAGETGAKQAWGFTPEISQQPTIQRKPLIQMLGGEDNAFEDVE* # ORIGINAL: g3954.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 23367 28482 . + . ID=g3954;Name=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 23367 28482 . + . ID=g3954.t1;Parent=g3954;Name=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 23367 26302 . + . ID=g3954.t1.exon1;Parent=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 23367 26302 . + 0 ID=cds.g3954.t1;Parent=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 26460 27003 . + . ID=g3954.t1.exon2;Parent=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 26460 27003 . + 1 ID=cds.g3954.t1;Parent=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 27169 28482 . + . ID=g3954.t1.exon3;Parent=g3954.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 27169 28482 . + 0 ID=cds.g3954.t1;Parent=g3954.t1 #PROT g3954.t1 g3954 MSATVSISEVQLLRCRAIRIDAEIDNAFQQIFRLRSEKLEIDLLIDAALDAIGDARSTRTTETSSSSERDARHGGEDEGIHSLSSNTRDAQCPPSLDTTMEEDAISDESCGSYEATQFFDEVETTKNCITGIHHLPHHATDSEISTMTTKTLDREVTAIGRVDAIADTEDSATKESDAIESSHANEDIEAVCDTHSVVGMANDVETTDTETKDTAAACDAAENIDKDTKAVCDAAATKDVAAVCEAADSVDAETKDTAAACDAANNFDVETKDTETKSTVAACGVAESVDVETKDTVAAQNAADSVDVETKDTETKSTVAACGVAESVDVETKDTVAAGDAAESYTAAAEEQSTANLETTAMDGAAIRDAVVGEHMRHKRVKKVYNRRKHYRLHADEEKPPNNSLSTPTSTKDTPISDANNSSIDVDGCPEQKRSTRDSAEVSGGTTESSAGSPALPMEVQPHAVVNASHEDRDSESECWVSQTGCESLAPTIDGDGDDDDICAQHTCTQPEDCRLCSLQGTNPAGVAAARMLCKVEFGTKRHKAITTTTTEETDEEFARQKWKNPSALWTLARKEEAEKVARLEMCATSAIAKGNTAVGHLLATRALALDATAKGALALLTVAEKHELTNSRDGSCSSPPSTQQMSFRQLDPRPVVVSITTPSDRQPVPSGRGASVYERTMCDHFLQGSFAFQKVKFAARPSRTRVLIGGGMSADLYGIISAVSAHLKSIDQAHEMHMKMGRGAMKGASASYHAESEIEVHLHAHSTESLARAAVCLSLVQSVGWGCNNDHLFSFIAYFAAEKLTPNQCSVMGMTLGNLLTLSTASDFAEFFPYMQVDAAATLTAMKGHWQRWFDDLNGIRKAYRRAKREKQSSSGDRAFHDSSSSGGESAPASPTPNGRSSGEPLMSDSDGEEAGGNDVLMTLRVNALKAALRDLADKSGNANMDNAFDEGAWSTRDWKKELERMFRGMPRLFDAARFWVRRGAFLSHACKGHFIPCPCPDKHGGTIPCKDRHCTSYEVCPGCSSAREMAQTSDLLRNPLVGSDSPENAHVIQRGAQVLASAWMCAHLRHDPSTRPTEVTFDAAIKSHFERFAESASRSLTHIRLSQAPIAEKLLVENAKYAAIVVDPRLDASGLFNLLVLARDRIEEADDARIVVHPLVPTPMDKAYAKWLRSKPSHDASTTALTEIDASFHATAGTQGVETSARLLGLHPLETTVTASLAFRLSRHKGVHASEEVPQSNDAGKTADSLLRRALAVGNLPQGATESERKSEGKGDADKALYGAHYGRQLTVAGSVRVIAEMASQGKQGIDWIASHVITPMFLVDAIIGGANTNATRDCALLSMTADEDDDKSEKLRKLTAETFAWTFAAEDKKAKESAVTTVTDLPLIHRYVAMRTVIACAMALSPKFAKAFGEAIATASRSVGLPAKFFLTKTTVVSHPFCISLRRSCGKINGIEVTSANGARTLELWLFNTTAAMGLPRWDRDLSAEELKKWASAEGRSVQIIDSFEWRENGINNNNNKNDRGDSSTGDRTGGPSQPDKSGSGNVVRCRGTVYVRIPSTLWCNRGDVAVMVVDSARGVPASASALLSMFAQM* # ORIGINAL: g3946.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 909 2081 . + . ID=g3946;Name=g3946.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 909 2081 . + . ID=g3946.t1;Parent=g3946;Name=g3946.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 909 1723 . + . ID=g3946.t1.exon1;Parent=g3946.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 909 1723 . + 0 ID=cds.g3946.t1;Parent=g3946.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 1868 2081 . + . ID=g3946.t1.exon2;Parent=g3946.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 1868 2081 . + 1 ID=cds.g3946.t1;Parent=g3946.t1 #PROT g3946.t1 g3946 MAIHAPESDAHRAVIGPTQRDDDDDYLDSFLLAVKRIVPNSAGTSGASDDNPAAAAIATDTGRHDATTAGGLDRRSGTPLTGHSATAATAAAATAAAAATEEEEEKGEKEEEEEEGADVTVRGAAALTQRYEHIQRHLCNNCGSIFRRVVTIPGVTAGVEVCNSSSIPPSRLPLPFSSRRQLLQEVRQPPLRATLTTEGGKEEMTTQQWAMQNEQQLVIAAAIHGQMTMTMTRATVVARPGQVQGALLPMLCGSLPAVLPFCPAGQSCPQGGRPFPNGYSPQEEDDGHTKASVAFACGHCGALGNHIAKTHPYKDVPVAITQQGRLHQDDSVEPTALAGKGN* # PASA_UPDATE: g3950.t1, single gene model update, valid-1, status:[pasa:asmbl_4948,status:12], valid-1 NODE_275_length_28534_cov_40.9601 . gene 8004 12196 . - . ID=g3950;Name=g3950.t1 NODE_275_length_28534_cov_40.9601 . mRNA 8004 12196 . - . ID=g3950.t1;Parent=g3950;Name=g3950.t1 NODE_275_length_28534_cov_40.9601 . exon 11938 12196 . - . ID=g3950.t1.exon1;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . CDS 11938 12196 . - 0 ID=cds.g3950.t1;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . exon 8741 11517 . - . ID=g3950.t1.exon2;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . CDS 8741 11517 . - 2 ID=cds.g3950.t1;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . exon 8004 8531 . - . ID=g3950.t1.exon3;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . CDS 8373 8531 . - 0 ID=cds.g3950.t1;Parent=g3950.t1 NODE_275_length_28534_cov_40.9601 . three_prime_UTR 8004 8372 . - . ID=g3950.t1.utr3p1;Parent=g3950.t1 #PROT g3950.t1 g3950 MSARVITVVFHPQQGQALQFENLELSPGGEINVAYLKDVFRLTVVRRCDEHGENAVGIPYSPSTGDSRGKFDSLSTLHITGDSVDSASRRFSSASTASHVPTADQTSSPASSSLLAHSSPITVASLTPQHSPYSIGSSSYAAVVPSSDAFDIVMSAPPSVAVGMETPVGGLSESGVAFELHSDDFSESMSAAMEATARGSYPLASYEAVTPLNCCSINVENGGGGCGGCGGGEMDVNLHETEAGLCNNNSSSRKDDRITGDHLFDFLSQQLMYGANTALVQEHDLAMGGVRTPNDSGNSTSACRSPSASVDATNGASSYPVLSEETLASLVDAAGDAVLRGSFGSVLDFLTEETLFGVVHSVENAYEGESVLVSHMGSPGSADGCAPRRDSAASTFADAGSPSAEVRMRADFDVGSDLIPAGTGRLEGIPEGLELVQPQTRPSTERHDIFLRKHVWYGPGEVMLNLGARHPHLTGRRVCVGGKGSRTSSSTTAASSLTSRAALSVAGPALVLTAEVLPSVEPIRVCAKCAHGTCKGRTVRLTLPSDDYRIESAFVGGDLREEQRYLWCFAKISTQCTSYPFSVHFALVDGSTNISSWVVEEGQLDLRIKRKESVKSLRHANTGGMASPESLFADGIAFSKQMDYGHVIGLRTSENLMFRVWETVPGELSMQESLRAAVCMRPPAATYWSAVVLHQMEQYGDALRTCAMAFRSAGWAVKLPTLVPNIPDCLPIAAATLAAEVVVLSSTSRRPLGDDELDVLRLLASIARDAEDEWSPGCRELVDWIARISHCDGVYLRARIAAASGSPQTQASALEDCREAIAALTALSPRSTDFGTRNLLANLHDLAGWLCARFLLWDDKVRHHLSALEWRVRGRQKWQVPWHDQALGSSFMSFALIAKSIETGGGSASGQSGQLAVLNASHAFSQLLSSSGSPCDVVSHDGDSVAGGVPLGPVMMITRAKRCQEDSFRYERAYLDLLRISNHDSVHTRILRTFIALREARLLMANGKSIEKVLDDMRLIRDNCHRRTKTDNRIYDSIEQFRRELDAQAKGHPPKPVLAHLFKM* # ORIGINAL: g3949.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 7252 7716 . - . ID=g3949;Name=g3949.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 7252 7716 . - . ID=g3949.t1;Parent=g3949;Name=g3949.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 7252 7716 . - . ID=g3949.t1.exon1;Parent=g3949.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 7252 7716 . - 0 ID=cds.g3949.t1;Parent=g3949.t1 #PROT g3949.t1 g3949 MAPALLPGITLLLLAANGVGEIAAGIAFSLGLVRLRTRGAPLSPHVLLLFRCWGMSIIGFGIMTLFLVAEHGGIAEMANVLSLRGAASHASPSTDAGSFLAVSYGAVFYHGAISATYLHGIAAGLLDGPAWVLGTLAHVIGCIGFASHALVGRM* # ORIGINAL: g3951.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 13022 17407 . + . ID=g3951;Name=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 13022 17407 . + . ID=g3951.t1;Parent=g3951;Name=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 13022 13151 . + . ID=g3951.t1.exon1;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 13022 13151 . + 0 ID=cds.g3951.t1;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 13447 13570 . + . ID=g3951.t1.exon2;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 13447 13570 . + 2 ID=cds.g3951.t1;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 13699 13851 . + . ID=g3951.t1.exon3;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 13699 13851 . + 1 ID=cds.g3951.t1;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 14118 14862 . + . ID=g3951.t1.exon4;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 14118 14862 . + 1 ID=cds.g3951.t1;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 15212 17407 . + . ID=g3951.t1.exon5;Parent=g3951.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 15212 17407 . + 0 ID=cds.g3951.t1;Parent=g3951.t1 #PROT g3951.t1 g3951 MSEEEDASSLASLRQQKAVASTRPGLFKLSIHKCIISDSGSIPEPFRPHVILTHEGLEFRTKSLEHSREPLWDETFVFELTGSESEGQIDIEVWLHSFFVNEDACLGSAFISIPDLIAPEATNYTIEVKDENENVRGTVIASYHLVQWGGLRRVSRSSANMIELSDDDGYASTDGVVDTVEDEEAIEAEIITPDVVEMFSAVSRSTMSLRGSKRDLTARRVPPWFENTLHGRPAEEDGAVVRSTADLSAAATAEASPVPTWTTNIDRIRGARAREVREALFISREGDIVFYSGRTVVILDPNTGAQRFYSGHTQEILCMAVHPCRTIAATAGSLREKQVCVWAVDTGETLAVLEQVGVQGNIVTLTFSPDGTLLMTVADDPLCTLTLWQWRTGQIIAQYSAHEDHVFAARFDTNDPSGNAYATCGVKHMMFWSRDGTVIEGNEGTANGQNVAKRRTMFAMCCTAKGLFVSGGMDGSITSWRAGHIVEEVRGHTGPVTALVTCGRAGHFISASLDGDVRLWNEDLKQIATLSVSNALRNSSENSAAVFQHVGIRSLDTLNNDAVALLEDGSIVRIVVDVPRGSLTLGPSLGLVSRCHSTLLMKEVWALDLVPGAVRGAIGAEYATGGDDGRVVFWKSGRSLPVAEIPFVTGSTGVTTSGSVRSLTFSPDGSALFAAGLDGSIWVLQTHIVLDAVAKHLHISEIREAPPLRTGSPAGLLNKVPVGIQRSFERSSSRASLTGSIGGSSDKAAVTRTSSHPNLGSGASLGGGNDKAVQQTKSHVTGSHLSGSKSNVNSGSKTNLSGSKTNVSRGSTTNVNSGGSTTNVNGGSAGNKALSAVAATSKALGGSLTSLNGSKMELKASTLSIIKAESLHVVLKPLAPVTSVKSCIYDIRSSPCGTLVALGTHLGELKIAYAEDLVAASKENFAKSSVPLVSTRGHTNIITHIDWARDSRKLRTRCMDGHVHYWLLQEAISEEEEEEQSKSHGPLLTIVKLSATLPATAEIEWATERCSTGRHFRGAWEDAMNFVDGGRVDAADVRCNASGVGAAAMAFSWGAVAVGAYPYDEHRAHGNNEGVPRSTGSHLGSVASVLFLTDDRVVSVGGRDGAVIEWKVERH* # ORIGINAL: g3948.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 3743 5248 . + . ID=g3948;Name=g3948.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 3743 5248 . + . ID=g3948.t1;Parent=g3948;Name=g3948.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 3743 5248 . + . ID=g3948.t1.exon1;Parent=g3948.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 3743 5248 . + 0 ID=cds.g3948.t1;Parent=g3948.t1 #PROT g3948.t1 g3948 MATTALAATALTMTAMSHMPTPVRPQSPDPDFVNYTGGGSPVRKRVKKASHHRLLSPITVPAQTRTATPAGVPAPAAATTAPPTATAVTATARGAAPTTRTLATRGVQCPPPGGPLTAAGVQPLLYSNVVASRGCSNGSRNSAGSNSGNLGKDQFTSPPALVRLWPVPALLPAPLTSMQFASAVMRIAQQVPLEQQQQQQQQQQLQQQQQQPQQQQQPQQSNNGKRHAEESPVVQTQFSRRGGCPGQQSQAQLQTVVADSQSGVHTAGRQHKAPRLSAATDSPPSAGPVGIRSGTGTRLQTGTTPDTRPSNNIGRTYSSVAAASRDDDADTLATMLRDCVSSLDCGPLPQARSGAIDSSIRTAAVRHAARSTGTLAAGGDTLRLSVSATAAAQQTATTTSTAAAQQTATATSTAATIRASALSMPMTASTIRASALSMPMTASTQTPTVPPPVSPPPPPPQRLSLSLKRLSQSPAASLPGNQPATKKPQKGPFDWGSGIDD* # ORIGINAL: g3947.t1 original gene structure, not modified by PASA NODE_275_length_28534_cov_40.9601 AUGUSTUS gene 2451 3212 . + . ID=g3947;Name=g3947.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS mRNA 2451 3212 . + . ID=g3947.t1;Parent=g3947;Name=g3947.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS exon 2451 3212 . + . ID=g3947.t1.exon1;Parent=g3947.t1 NODE_275_length_28534_cov_40.9601 AUGUSTUS CDS 2451 3212 . + 0 ID=cds.g3947.t1;Parent=g3947.t1 #PROT g3947.t1 g3947 MSVNVATLVPTTTGGALGLAAEGWRGASKGVIMALTLDPSDTNSRLAYPVKTQRCQFGEPVKGYHRPMLHFRLSPTAKQLNLPPSAKLRAPCCQCPSCLHVDAHAAETTTFKDDGHDYQLHSCALCHTFCAFPAMLMVCGVSARATNGSGVPALAAWIQMVVPNCVATECPDAVNQGITNLAIASNNNNNNNNNNNNNNNNNNNNNNNNNIGGAVQHTVAPCGGMIVMRTQSSQGRLASTDHEGTVRVLIDCP* # PASA_UPDATE: g10240.t1, single gene model update, valid-1, status:[pasa:asmbl_4701,status:12], valid-1 NODE_263_length_28735_cov_39.7017 . gene 295 3506 . - . ID=g10240;Name=g10240.t1 NODE_263_length_28735_cov_39.7017 . mRNA 295 3506 . - . ID=g10240.t1;Parent=g10240;Name=g10240.t1 NODE_263_length_28735_cov_39.7017 . five_prime_UTR 3462 3506 . - . ID=g10240.t1.utr5p1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . five_prime_UTR 3205 3227 . - . ID=g10240.t1.utr5p2;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 3462 3506 . - . ID=g10240.t1.exon1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 3190 3227 . - . ID=g10240.t1.exon2;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 3190 3204 . - 0 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 2980 3030 . - . ID=g10240.t1.exon3;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 2980 3030 . - 0 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 2727 2835 . - . ID=g10240.t1.exon4;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 2727 2835 . - 0 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 2339 2595 . - . ID=g10240.t1.exon5;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 2339 2595 . - 2 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 1584 2067 . - . ID=g10240.t1.exon6;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 1584 2067 . - 0 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 1068 1190 . - . ID=g10240.t1.exon7;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 1068 1190 . - 2 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 613 788 . - . ID=g10240.t1.exon8;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 613 788 . - 2 ID=cds.g10240.t1;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . exon 295 433 . - . ID=g10240.t1.exon9;Parent=g10240.t1 NODE_263_length_28735_cov_39.7017 . CDS 295 433 . - 0 ID=cds.g10240.t1;Parent=g10240.t1;3_prime_partial=true #PROT g10240.t1 g10240 MPPTRGDSRTAVITNKAFEDEQSLTGGEPNGSGLSTRGPYKASGKSTTDKLNDFFCKQGVYGDPWVKRHWPMVALIGMVAVLVVVIPVAVVYGQPGPKKFTPDQVLTGAMTGALGPSYTEGQTYAEKATFSASTMQDFPRVALLTNAVFGADGLTVLKANIARNATQFAKAQLQNAGLKWYQDIRTMLPIPNDFNRQVCGDATVFGMNTTCCAVVMVRNLADNLDASVIKNINAFRGDDVDSNIVCDINTGRFSLDSLGSAVSNAVQSGWLKNLLLNKAFVNTNIKGKIYITSADYQVNTARGILDIKRGISVFAEGTMVVAPAALASTVASFTQWSLVADVFMFQAYFPLNANLNSFVMDGATLSIHGRASAQVASVSVGVNNLVIKAVGVGSTPDVSVDIGATVSFGDYSKQKYLPAPLTFTGSGKFSGASSLVFTGFLDRWQPYPDVA # PASA_UPDATE: g10243.t1, single gene model update, valid-1, status:[pasa:asmbl_4699,status:12],[pasa:asmbl_4700,status:12],[pasa:asmbl_4703,status:12], valid-1 NODE_263_length_28735_cov_39.7017 . gene 12943 20886 . - . ID=g10243;Name=g10243.t1 NODE_263_length_28735_cov_39.7017 . mRNA 12943 20886 . - . ID=g10243.t1;Parent=g10243;Name=g10243.t1 NODE_263_length_28735_cov_39.7017 . five_prime_UTR 20630 20886 . - . ID=g10243.t1.utr5p1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 19235 20886 . - . ID=g10243.t1.exon1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 19235 20629 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 17206 18513 . - . ID=g10243.t1.exon2;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 17206 18513 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 16629 16796 . - . ID=g10243.t1.exon3;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 16629 16796 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 16017 16432 . - . ID=g10243.t1.exon4;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 16017 16432 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 15382 15622 . - . ID=g10243.t1.exon5;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 15382 15622 . - 1 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 15103 15181 . - . ID=g10243.t1.exon6;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 15103 15181 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 14753 14934 . - . ID=g10243.t1.exon7;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 14753 14934 . - 2 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 14378 14551 . - . ID=g10243.t1.exon8;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 14378 14551 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 13505 14108 . - . ID=g10243.t1.exon9;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . CDS 13944 14108 . - 0 ID=cds.g10243.t1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . exon 12943 13290 . - . ID=g10243.t1.exon10;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . three_prime_UTR 13505 13943 . - . ID=g10243.t1.utr3p1;Parent=g10243.t1 NODE_263_length_28735_cov_39.7017 . three_prime_UTR 12943 13290 . - . ID=g10243.t1.utr3p2;Parent=g10243.t1 #PROT g10243.t1 g10243 MASSQQGASGNTFSARLTSFMTASWNRAMQSNAADASPPRPAQPPAQTSPTPLDRVYPRAPPRAHGVHSTATAAIQQQQPVPDAAQVHGRRPTPTTTTLPMSSSESGSHPRQHSGRFWRESKPVGAVPATRTDASVRTGDTDRARNVAAGASMHIDTRGHTAPHVQARVVEQRISNNAHKGHCTSANHKHAHAHVPQRPPSADVHTRNVVRPAPAQPAAQRQPAPTARAPSAGATVAVQPHHHGLQRAYPLRQMWREYGSDSGRDGDSDDADAPDAPPRAHGTAGVHLADGRTAAATTVRMNARQLVYSSQRNSAADPRDRRASQKRPRDDADADDADDRRVAPRHTSAHRHHHAHKGPMVPPCATHHHHLSAPHRPVQVSVRHGQGAGRRDDSSDDQTSDSSGGDGGGWISHAGHHVGHRHVGRVAVAMKRDPGRDDDASRERIADQRRAQADAIARSRSGMQQAANNAIPVFDPVSHFRRKRSPPPDDLSDYPPAKRHHTADFEMRRRLSTGGHVIDLTSPTSDAVMAAFHEMKRKPPTAAGSNSQAGSNSQNSQNSPTAGVGPLPPPPLLTAPTAQPSAPGNAAVAACALDAALTTTTQSPAGVATSRSTITGGVGAVATGAGAVNAAAGAVATTWDVMQTAVSAQNVRVQQGASRAPLDPRTDAISAESSPQHSLQSTQSPRSTHGTHSPFTPQLTVRRPTLTPTTGDDSRRAPTGTPPSIHKQPGANAFQNSNRDPAMVRTSTLTPTSNHAATPPSAPPPSDRVVTPTGARGALTRSAGAMAVLEAARTEARAPPSNVVIPVTPVRRFDGDTNSPVTTRLREPPTSSPIPARLNKIVSGMRDDADSVHAPTPTLQSRPQSQSQFQSLLQLRGHVDSVRTGRPVPFQPTALIDLTEEPVTPPRPPPQQSHLRQINECLELSSDDSDIIAITMTPRPVVDMRWRDDKWISLDPVVRRRPLPQTTVAACDGTVLLLRFPEGRSLDNHAPEEGHVAGEDGRDDADDRASVVSSNATAVAVVPLAASFVGGGDSEVRRKGGDAKFIGENWVELVKAAGGELDGDDGDDGDHGDHSSLITALGCFLPEKLATSKIGRSVIEQLVAAASLQAPPKESEAESTVAHNHTTAFATRLLRQSLLVCPPGFEPKSAWHCDKDDEWRANWTTGFESALNTATPPDGSTQQLSFLVDYMDAQLRAVERTGDPGGTLLGIALQYGSPKAFASHVEDIVCVAIAAYNRHLSSDSALACSALERQTLFMRLINMTVTLSGWKSRTQQHTASPRSRAHADGSIRKELLRILTTKLANLGKTANNCAGLQAFLQDIRCDAVRADVADYLLFDCYDCPGQRTRLRDAPVCLRKVMAELCLRGLIPAPKN* # ORIGINAL: g10245.t1 original gene structure, not modified by PASA NODE_263_length_28735_cov_39.7017 AUGUSTUS gene 26924 27796 . - . ID=g10245;Name=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS mRNA 26924 27796 . - . ID=g10245.t1;Parent=g10245;Name=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 27711 27796 . - . ID=g10245.t1.exon1;Parent=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 27711 27796 . - 0 ID=cds.g10245.t1;Parent=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 27381 27554 . - . ID=g10245.t1.exon2;Parent=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 27381 27554 . - 1 ID=cds.g10245.t1;Parent=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 26924 27224 . - . ID=g10245.t1.exon3;Parent=g10245.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 26924 27224 . - 1 ID=cds.g10245.t1;Parent=g10245.t1 #PROT g10245.t1 g10245 MAKGSVYDLLHKPETREYLSIQKKLAIAGDCIRGLDYLHQHRPVVLHRDMKSPNVLIDAHYVAKVADFGLSTFKKPEEGVVVGSLLWMAPEVMAGQYTTASDVYSFGVILWELIAEELPFSEYHTGNAEEFHNVIMPRVGTKGLRPTISADFPPQIAELVRSCWAQDATQRPSAKVVNDRLRALSH* # ORIGINAL: g10241.t1 original gene structure, not modified by PASA NODE_263_length_28735_cov_39.7017 AUGUSTUS gene 4314 8703 . + . ID=g10241;Name=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS mRNA 4314 8703 . + . ID=g10241.t1;Parent=g10241;Name=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 4314 5282 . + . ID=g10241.t1.exon1;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 4314 5282 . + 0 ID=cds.g10241.t1;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 5464 5774 . + . ID=g10241.t1.exon2;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 5464 5774 . + 0 ID=cds.g10241.t1;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 5932 6008 . + . ID=g10241.t1.exon3;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 5932 6008 . + 1 ID=cds.g10241.t1;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 6547 6710 . + . ID=g10241.t1.exon4;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 6547 6710 . + 2 ID=cds.g10241.t1;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 7036 8703 . + . ID=g10241.t1.exon5;Parent=g10241.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 7036 8703 . + 0 ID=cds.g10241.t1;Parent=g10241.t1 #PROT g10241.t1 g10241 MNGAIDIGLHAVEHGDTKLGVCRSCDVEKHLRRTSRWFELCADPYKRKIIERMFKHFDTKDMRNYVRNILLPLLRKDYIYSLPSNMPIVRPERAPEKQVAVGEEEDESASASALAEAPTPPRKPNSAGSASRKSVTVALPSQPTDRPASAKRATSETALVEADALGGSTTAVVPSSQSFGTRRPYAFRSGGMTYDSGMDDLVARMFKWYETTTHWSKVNFVVSLLQQCDIPLLQFAVGLLSKSKKRDMIRSLPVHISKAILATLDADTLKKAMRVSRHWQQLVREVLEEKELRKEAHIMQEFYSRNMKTSKAVSEIEQGDEIQSMWMEERNNFCGRYNLRAFRNQEERGRVTHYDGAVHVVSASWNRTIEVWNVSTGKCVRIIKGHAGSVRCVRLCENRDFILSGGFDTTIRQWEISTGACKRILKGHTSTVQCLDHDDELIVSGSRDHNVKSKVRIWNLETYNCIRSMLAHTGPVNCIQFDDWHLISGGADHETKLWSVKTGMCLKVMEHPDEINTLQFSHLRVVTGASDGKVRVWNLRTGHCIRTLRISAASDPIRCLTYCDVDRLVIGTDAGITAIDFETGKESQASAKPADSEAAEVVAANKRWLVAAQAAEKERQRRNRDLPDSNWFARDPNASGPREEGPQRHAQLASLLDSLRRRPIVGIPAMEPEVGIANVTAPDAPPICIDTLEVLPPPPSVTAEAAAAADATTLSNLTTADRIKASSQPLLLSRKSQAIAQMPEKGWAVARVGDRNPLPQQSLDLTRPKSSLGLRQAGETVDIVELDPAAKSLRARRPASAVAALVQAVSLSDLARSASRAQSAKSLRTTIAANAAVASQFPPGSTIGPDGVVLAPAGRQVPAALAITQLRDITGTMPLPFGKSISDPWANDSPDATDGPRRPKSSPTRKSSAKVARARRVKSGHAAVRVPTGGGIGGADSGKASSSKRGKAGKGGKDESESSSAEEEHAQRASFPRGSSGRAPRSPKAASSNRPPRGALGTTIQVLPLTERGMTPSALKISLLRVPSDVTDDSHVGGLAAYGMYANTGVYFRDPHEFLTSL* # PASA_UPDATE: g10242.t1, single gene model update, valid-1, status:[pasa:asmbl_4702,status:3], valid-1 NODE_263_length_28735_cov_39.7017 . gene 8969 10870 . - . ID=g10242;Name=g10242.t1 NODE_263_length_28735_cov_39.7017 . mRNA 8969 10870 . - . ID=g10242.t1;Parent=g10242;Name=g10242.t1 NODE_263_length_28735_cov_39.7017 . five_prime_UTR 10795 10870 . - . ID=g10242.t1.utr5p1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 10648 10870 . - . ID=g10242.t1.exon1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 10648 10794 . - 0 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 10441 10488 . - . ID=g10242.t1.exon2;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 10441 10488 . - 0 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 10283 10336 . - . ID=g10242.t1.exon3;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 10283 10336 . - 0 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 10125 10178 . - . ID=g10242.t1.exon4;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 10125 10178 . - 0 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 9648 9715 . - . ID=g10242.t1.exon5;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 9648 9715 . - 0 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 9312 9424 . - . ID=g10242.t1.exon6;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 9312 9424 . - 1 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . exon 8969 9119 . - . ID=g10242.t1.exon7;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . CDS 9070 9119 . - 2 ID=cds.g10242.t1;Parent=g10242.t1 NODE_263_length_28735_cov_39.7017 . three_prime_UTR 8969 9069 . - . ID=g10242.t1.utr3p1;Parent=g10242.t1 #PROT g10242.t1 g10242 MGVLTGLPAGHFTVVELGLATAGAFVAGWIVNALINARLRPKYNRTLGGGDSPDVALSDDGEYKMVLVVNNDLKMGKGKVAAQCSHATLANYKELRKTNPEALKAWEMTGQPKIVLKGDNDKQLMELRRAAMEIGLSAHVIRDAGRTQIAPNSKTVLAVGPGPGAMVDRVTGHLKLY* # ORIGINAL: g10244.t1 original gene structure, not modified by PASA NODE_263_length_28735_cov_39.7017 AUGUSTUS gene 21360 25466 . - . ID=g10244;Name=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS mRNA 21360 25466 . - . ID=g10244.t1;Parent=g10244;Name=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 25320 25466 . - . ID=g10244.t1.exon1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 25320 25466 . - 0 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 24601 24942 . - . ID=g10244.t1.exon2;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 24601 24942 . - 0 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 24284 24348 . - . ID=g10244.t1.exon3;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 24284 24348 . - 0 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 23846 24108 . - . ID=g10244.t1.exon4;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 23846 24108 . - 1 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 23303 23607 . - . ID=g10244.t1.exon5;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 23303 23607 . - 2 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 23023 23132 . - . ID=g10244.t1.exon6;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 23023 23132 . - 0 ID=cds.g10244.t1;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS exon 21360 22806 . - . ID=g10244.t1.exon7;Parent=g10244.t1 NODE_263_length_28735_cov_39.7017 AUGUSTUS CDS 21360 22806 . - 1 ID=cds.g10244.t1;Parent=g10244.t1 #PROT g10244.t1 g10244 MTDGSVFEGGGVVSSPLEIFIVQLLLIVVFSRVIAFLIKPLKQPPVIAEIVAGILLGPSALCRNLTFKNHIFPATSLGVLTVFANVGLIIFLFIIGLEADLNLLTKGSRQSLIISGIGIALPFGLGAALSKYLYDEISPPGSTIEFGTFLLFIGCATSITAFPVLARILTERKLLNTPVGLATIGAAAIDDVTAWCILALVVSLVRAGSSKLVVLYTTLTAIGLILFLVLLVRPLLRKLAVMSLATRKQLPHSAVVLCFMGMFLFAWMTEWIGIHAIFGAFAFGLVVPREGGLNTQLCEKLEDLIVSMFLPLYFTLSGLKTNLGLISSGKAGGGTILIILVAVAGKFGGCTAMAKYCGYSVRHSLTIGILMNTKGLVELVVLNIGLDNGIISPQLFSMCVVMALFCTFITTPLTYLTYPKHMVIKDMVGNMTERLNAEGNCAAVSAGVQKQEPNQVIEFEIPTQRRKKEGRGFTNVVSWLNGDNATSFPLMTLTASIVTSKGERNVSLLKLTDTSSRPSSYMRHMVSAGDPKSQQWRSMLGSHAQMLQIGDCTEVVTFSSDSQVNDVCEVARMKNAEIIVAGFPAPDSFGESDGSSTEAINNLATMVTSLATIWRSNLGVFIVRGMPAVMRSVVCAVESTESVVSVENDILAMHLVGQMAKTRAAGTIALLITGSAQPELRDYGGSTSSVPAARGVVTVEVPDQDVTGSGVTGDSVLSPAGSRRSRYGGLGSQESSFRIRNAMQEMGSKPRKDAESQASSVAGDANGEADTQVHRLAEAIEIVLTREQKSKKARKITQVIRKPEDSLEHAIRTELETLKPDLLVLDYDVIFGDADQLATSLTRYVLLECKCSVLLARRDVDAVVAVTQAGSVDLAEETVTPQTDTRVLFSAL* # ORIGINAL: g13339.t1 original gene structure, not modified by PASA NODE_2204_length_7284_cov_41.4866 AUGUSTUS gene 126 2959 . + . ID=g13339;Name=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS mRNA 126 2959 . + . ID=g13339.t1;Parent=g13339;Name=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 126 288 . + . ID=g13339.t1.exon1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 126 288 . + 1 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 562 642 . + . ID=g13339.t1.exon2;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 562 642 . + 0 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 868 1013 . + . ID=g13339.t1.exon3;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 868 1013 . + 0 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 1244 1352 . + . ID=g13339.t1.exon4;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 1244 1352 . + 1 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 1659 1704 . + . ID=g13339.t1.exon5;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 1659 1704 . + 0 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 1892 1984 . + . ID=g13339.t1.exon6;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 1892 1984 . + 2 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 2469 2578 . + . ID=g13339.t1.exon7;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 2469 2578 . + 2 ID=cds.g13339.t1;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 2813 2959 . + . ID=g13339.t1.exon8;Parent=g13339.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 2813 2959 . + 0 ID=cds.g13339.t1;Parent=g13339.t1 #PROT g13339.t1 g13339 SLYDAAVNLAGVEAAIACVSEWLCRANAVRDVRKSQQSVIEKKKQQIAHLENVVANKQALIRMMIQHNASIVKEISRARDEEAHIARSKLGPLGTEFSAVSKAAALALRGEFGSFQTFPIHLAEYAKAQSTPRRPVCALAIHRLQSEHCASLFRELLLAAKFPQFMAMDMLVPWLVKAKITRDMREAVSRDIGGSADALLNQTSKWSKAYTDDVVARIAASDAKLNAAHSQRLIMSQNRAQDSLAKASEVRALIEAFSSQQGQFAVPWVTVDGANMRQWYDRYASLVGQMRQLELAH* # ORIGINAL: g13340.t1 original gene structure, not modified by PASA NODE_2204_length_7284_cov_41.4866 AUGUSTUS gene 4202 7284 . - . ID=g13340;Name=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS mRNA 4202 7284 . - . ID=g13340.t1;Parent=g13340;Name=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 7203 7284 . - . ID=g13340.t1.exon1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 7203 7284 . - 1 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 6607 6969 . - . ID=g13340.t1.exon2;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 6607 6969 . - 0 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 6294 6484 . - . ID=g13340.t1.exon3;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 6294 6484 . - 0 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 5984 6158 . - . ID=g13340.t1.exon4;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 5984 6158 . - 1 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 5634 5861 . - . ID=g13340.t1.exon5;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 5634 5861 . - 0 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 5276 5448 . - . ID=g13340.t1.exon6;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 5276 5448 . - 0 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 4721 5041 . - . ID=g13340.t1.exon7;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 4721 5041 . - 1 ID=cds.g13340.t1;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS exon 4202 4532 . - . ID=g13340.t1.exon8;Parent=g13340.t1 NODE_2204_length_7284_cov_41.4866 AUGUSTUS CDS 4202 4532 . - 1 ID=cds.g13340.t1;Parent=g13340.t1 #PROT g13340.t1 g13340 PIGVTTNLFTIGGNSLFALRLRNKILETFAVELPVTSILQSGTVAHLDEVIEGLTANSPGHRRASVVADNRQTFSRRVECIVPINTQGTRPPLYLVHPAGGFIFPYFTLAKYLGQSQPIYGIQDISLDDAAKRETFGTVEEMAEEYVKELLKHRPEGPYYLGGWSLGGQIAFHMAQLLKEQDKKVELVVLIDTATQEDYTRMGLLKNNMTKGMPLIRAQIKMRAKYYAEQKPESRFRKGFWNTMRKVLRADNSDEFGDIDNQAISAGVVTDPSTGRMVGTLDTHMKAAASYRPQHYDGHVLVIRAQDGGYGEGVDPVMRWLRFCPKAQLRNVEGDHYNVVAEPRVQRVAQCIGEAISVATFADTGIPREAHNSISTVLAFSEIDEYTRVGHVIKRSDGVLVRFRSALQFLRTNPTAEGIATFGPCAISSRDTNLVTFSAENLTATARRSHVVGTKHELVEPVTISRGEKLDYQMNVQIFKPIDDLKMSMEVYREGFGAPSYVNQSAFGIHTPRPEAYVVAFDLKLFTNARYYGKYIVRITFLDAEHNVLFKMKHHVDIPRGTNTSSGILSSLGFLSREGSRSDLTAGKSADLAVSKSGELAVSKSGELAVPKSGELAVPK* # ORIGINAL: g6332.t1 original gene structure, not modified by PASA NODE_8417_length_371_cov_79.9426 AUGUSTUS gene 1 308 . - . ID=g6332;Name=g6332.t1 NODE_8417_length_371_cov_79.9426 AUGUSTUS mRNA 1 308 . - . ID=g6332.t1;Parent=g6332;Name=g6332.t1 NODE_8417_length_371_cov_79.9426 AUGUSTUS exon 1 308 . - . ID=g6332.t1.exon1;Parent=g6332.t1 NODE_8417_length_371_cov_79.9426 AUGUSTUS CDS 1 308 . - 0 ID=cds.g6332.t1;Parent=g6332.t1 #PROT g6332.t1 g6332 MVNLRHQNVLSLCGVVTVDEPMLLLLEYVPYGNLRDYVRAISLPRRSAQSTVVMLTEFCRQIAQGMGYLERMRIVHRDLAARNCMVAQDSFGEHVVKVADFG # PASA_UPDATE: g243.t1, single gene model update, valid-1, status:[pasa:asmbl_9013,status:3], valid-1 NODE_714_length_18742_cov_44.9561 . gene 1191 2123 . + . ID=g243;Name=g243.t1 NODE_714_length_18742_cov_44.9561 . mRNA 1191 2123 . + . ID=g243.t1;Parent=g243;Name=g243.t1 NODE_714_length_18742_cov_44.9561 . five_prime_UTR 1191 1316 . + . ID=g243.t1.utr5p1;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . exon 1191 1472 . + . ID=g243.t1.exon1;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . CDS 1317 1472 . + 0 ID=cds.g243.t1;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . exon 1555 1706 . + . ID=g243.t1.exon2;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . CDS 1555 1706 . + 0 ID=cds.g243.t1;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . exon 1861 2123 . + . ID=g243.t1.exon3;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . CDS 1861 2011 . + 1 ID=cds.g243.t1;Parent=g243.t1 NODE_714_length_18742_cov_44.9561 . three_prime_UTR 2012 2123 . + . ID=g243.t1.utr3p1;Parent=g243.t1 #PROT g243.t1 g243 MVYPNPNPTWLSGRGVWATYLLLIATIRVFLGFVPSMSDEASWAVTSILHNTITWIIFHLTLGVPFETEDQGKYDTWTHWEQIDGGQQFTSTKKFLTSIPIVLFLISTHYSTCDNLLFAVNFLSVAIVLISKLPQLHKVRLFWNNNLIYRER* # ORIGINAL: g245.t1 original gene structure, not modified by PASA NODE_714_length_18742_cov_44.9561 AUGUSTUS gene 4839 17814 . + . ID=g245;Name=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS mRNA 4839 17814 . + . ID=g245.t1;Parent=g245;Name=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 4839 4863 . + . ID=g245.t1.exon1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 4839 4863 . + 0 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 4949 5085 . + . ID=g245.t1.exon2;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 4949 5085 . + 2 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 5194 5251 . + . ID=g245.t1.exon3;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 5194 5251 . + 0 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 5373 5461 . + . ID=g245.t1.exon4;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 5373 5461 . + 2 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 5546 5634 . + . ID=g245.t1.exon5;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 5546 5634 . + 0 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 5730 17599 . + . ID=g245.t1.exon6;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 5730 17599 . + 1 ID=cds.g245.t1;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS exon 17693 17814 . + . ID=g245.t1.exon7;Parent=g245.t1 NODE_714_length_18742_cov_44.9561 AUGUSTUS CDS 17693 17814 . + 2 ID=cds.g245.t1;Parent=g245.t1 #PROT g245.t1 g245 MATPGTRTDKASGAASAGATTLGMPSTSDMLAKSFRQRGYYSEMLSGADVEIIKDVPEASGVRRAAKFKKTPKASTFVEPKVAVGAAEAEAAARMDAASLSKSDVPPKALEPKVMLPYKHGLGKTPRKIEIERRKRTFASQSIESLIAELGIDADELLPATTSVAGVAVSSTFLPLEVFDNTDNECRTAEEWVDLGKENGAMKGVPGKTILRDESTGAVAWKECRMLKHDAATGRFLVQLTGREKQLWVPRIQLLFLAEDPSLFARRIADAHAQRKEAEARLRYELYIDCMPTDDIPPMRAEQIKRIIAGTLTTKELKKPRYEERAARLAREAEIDYARTMSKIIFDVTVDGRDDYAHISVPRSALDVVPARGTVDVPRYRFYDQRGEFLFNSFLTKGEVITAIMKVRAECGRAMAMTLFNLNVSKSVRLDEFEQMQTQSYSQVQTFLRETWLLSLKNLIRNSLRDVGKGWFNMNEKNKEVYEISKLQRFMTMVKFAMQDSLRSMVQGSLQAFTRMFVRGAESAADGVVWTGADLTQSPVKTKRNPLFLLDLVANKSGFRYSTPLAHFENAVLTVFDKAIASTQSLPQLEQLVMEDLFWANTPILESVNEGEPDVQALRNTIRATIRQSLVPLQEYARGYDRYLEFFNLDPTDYIRRFEAANHTVEEFRAEIELHSTEKEAIEASIPQHISIGLFWVNCESVRSQMSKKRKDLGKAVTDLLSRVMRQRADRILGDFKNISRKLFERPNSIEDLDEQKEYMKTIPDAVRLIQKEVDTLLGDYEILDGFNCNLASDDFDAKWSAFGGPRRIEQQMEQTYEVLDKDAERFQKNLMADQGEFEENLMQLDMVVAGFSSHGDINKAQEIAAEVRKIAKQLKDCQNKATVFNNRERLFNLETTPYDKLAKVVRDFEPYKNLWLTTADWLKWNDSWLHDPFLQLDPEAVESSLNGALKVMYKSVKQFKDVPGCLAVASNVKAQMEAFKPYVPLIQSLRNPGMRERHWEQLSTQLGFSVKPTEELTFSGCLDMRLQDHVAVISRVAEVAGKEYSIEAALDKMLSEWEGVNLDIMAYRDTGTCIMRGSEEPSQLLDDHIVMTQSMSFSPYKKPFEERIAQWEARLKLVQDVLEEWMACQRTWLYLEPIFSSEDINRQLPTESKRYQTVDRIWRKILAGAKANSNVISLCPDPAMLESFRECNKLLELVQKGLSEYLETKRAAFPRFYFLSDDELLQILSQTKDPKAVQPHLRKCFENIAKLEFQDDLKITAMFSGEGERVQFSGELYPTGNVEEWLLEVEKTMIRSLKHIIQEALDAYPEEERTDWVLRWPGQVVIAGSQTYWAAQVTAAIEEGTAGVQELHRELLDQLQGLVELVRGRLNRIARMVLSALIVIDVHSRDVVSKLIEENVTSSNDFDWISQLRYYWEEENLLIRAVNAEFQYGYEYLGNTGRLVITPLTDRCYLTLTGALHLNMGGAPAGPAGTGKTESVKDLAKALAKQCVVFNCSDQLDFLAMGKFFKGLASAGAWSCFDEFNRIDIEVLSVIAQQITTIQKALQAKVDRFVFEGVEIALDPTFAVFITMNPGYAGRTELPDNLKALFRPVAMMVPDYALIAEISLFSFGFSKAKALAGKIVSTFKLSSEQLSSQDHYDFGMRAVKTVISAAGNLKREDTDMSEELILLRALRDVNVPKFLADDLILFNGIISDLFPGITEARIDYGALEASIRESCEAMGLDAVDKFVGKCIQLYETTVVRHGLMLVGPTGSGKTACYRVLKNALTRLAGTQAPSGAQYQTVHTYVLNPKSITMGQLYGEFDALTHEWTDGILSALVRRGVDDTTPDKKWYMFDGPVDAIWIENMNTVLDDNKKLCLSSGEIIKLTDTMTMCFEVEDLAVASPATVSRCGMVYLEPSILGLAPFVRCWLLRLPERLSAHRDALQALFDGHLEESLRFVRTSVRETLASVDSNLTFSLMNILDCLFKPFIPTNETEEATVRPAEVFAAHVEPFFFFALVWSLGATCDADGRELFSKFLRDRMRATACKLQFPEGGTVYDYRLSEDGEPPRWIGWMEGTPEFTVAPRTQFADIIVPTVDTVRYSHLLDMLVRSGKQVLCVGPTGTGKTLSVSDKLSNNLPPEYISHFCVFSARTSANQTQDIIDAKLDKRRKGVFAPPLGKRFVIFIDDLNMPVLEKYGAQPPIELLRQWMDHGGWYDRKAIGSFREIVDVGFVCAMGPPGGGRNPVTKRLTRHFNLLAFTEMSDASKERIFATILGSFLTGFPDASQHTKTIVGATISVYNTITTQLLPTPAKSHYTFNLRDLSKVFQGLLMADLGQLDGPTGLLRLWVHECCRVFRDRLVNDEDRTWFSDLLKTNMRKSFGMSWEDVVPHEPLLYGDFMSQAADSKTYGEMPDFPRLVKTLEEYLDDFNAANTAQMRLVLFRDAIEHVARISRIIRQPRGNALLLGVGGSGRQSLTRLATFMADYELVQIELSKNYGLNEWREDLKRLLIRSGVDGHSVVFLFTDTQIKHESFLEDINNILNSGDVPTLFSNDDFDNICNSIRTAAIDSGIQPTKANLLSFYFRRVRTNLHLVLCMSPLGEVFRARLRMFPALVNCTTIDWFSAWPDEALRSVAASFLSDIADIDYEKVGPGLVDTCVGIHQSVVLRSKLYLAELNRHNYVTPTSYLELLGIFAVLLGKRRTEVNGHRNRTATGLEKLLTTATEVELLQQELQTMQPMLEQAARDTLETMEKIARDKVIAEETRVVVGKEEKQAQEKAEETKAIASDAQKDLDEALPALDAALASLKSLNKNDVVEMRSMQRPPAGVKLVMEAVCIMKGVKPKKVEGSKPGQKVDDYWEAGRGLLADPQRFLESLFRFDKDNISDPVIQKIQPYIDSEEFQPAVIAKVSKACTSICQWVRAMHKYHFVSKSVAPKRARLEAAQESLQETLRVLNDAKMRLHEVEMNISELEKKYAESVAKKNELTRKCEECSTKLDRAKKLIGALGDEKSRWEETVKDLDRKLVNIVGDIVVAAGTIAYLSPFTAEYRAMLVGEWHANLVRLQVPHTPGVTLVGTLSDPVRLRQWQIAGLPRDSLSIENGVVVSSSRRWPLFIDPQGQANKWIKNLEKDQGLDVVKLTDRDFLRSLENAVRFGKPCLLENVGEELDPALEPILLRQTFKQAGSTVIKIGDAIIPYHDDFKLYITTTLSNPHYTPEVSVKVTLVNFTLAPSGLEDQLLALVVAEERPDLEDAKNQLIVSNAKMQQELKAIEDEILFLLSSVQGSPVDDERLIDTLQASKKTSEEIKTKVMHAERTEKDIDATRSKYIPVAVRVRILFFCITDLAMVDPMYQYSLSWFVNLFLAGIANAEKSDDLEQRITNIKEFFTFSLYANVCRSLFEKHKLLFSFLLCGRILMDDGKIDMLEWRFLTAGGTSSKELLPSPASWLSDRAWAEVLGLSTLPSFSKIAREFYDNLDGFKRVFDSPNPYRETLPGKWCQTLDGFQRMLVLRCLRPDKITNAMQDFVADHLGQQFIEPQSADLAVVFKDSSPSTPLIFVLSPGTDPANNLYKLAEEMRFSKKLSSVSLGQGQGPRAEAMMREAMERGHWIFFQNCHLAPSWMPSLERLIEGIAPDKVHRDFRIWLTSMPSPSFPVSVLQNGVKMTVEPPRGIKANLMRSYNGFNDAFLESCDKHTADVWKKLLFSLCFFHGGIIERRKFGALGFNIPYEFTDGDLRICVSQLRMFLNEYDEIPYKVLRYTAGHINYGGRVTDDWDRRTVMNILNDYYASDVLRDQHLFSASEVHVQPASTNHKGYVGFIRGLPINDAPEIFGLHANADITFAQNETYRMLGEIMAMQPKSAAAGGRTREEVVGDIANDILARLPLPMSLEAVVKAHPVRYEESMNTVLIQEVIRYNRLLAVIHESLQDMLKALKGLVVMSSLLESVLGSIFNNQVPELWAAKAYPSLKPLASWVTDLLERIRFITTWRDAGIPKVFWISGFFFPQAFLTGTLQNFARKYVVSIDSISFDFKVMRGNEADIRDPPQDGSYVRGLFLEGARWDAETNGLAESRPKELYTELPIIWLLPVVKRKKPESGFYECPVYKTLTRAGTLSTTGHSTNYVLSIELPSSLPQKHWIQRGVALLCALNY* # PASA_UPDATE: g244.t1, single gene model update, valid-1, status:[pasa:asmbl_9010,status:3], valid-1 # PASA_UPDATE: g244.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9008,status:12], valid-1 NODE_714_length_18742_cov_44.9561 . gene 2013 4457 . - . ID=g244;Name=g244.t1 NODE_714_length_18742_cov_44.9561 . mRNA 2013 4457 . - . ID=g244.t1;Parent=g244;Name=g244.t1 NODE_714_length_18742_cov_44.9561 . five_prime_UTR 4379 4457 . - . ID=g244.t1.utr5p1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 4210 4457 . - . ID=g244.t1.exon1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 4210 4378 . - 0 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 3985 4093 . - . ID=g244.t1.exon2;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 3985 4093 . - 2 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 3673 3878 . - . ID=g244.t1.exon3;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 3673 3878 . - 1 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 3390 3567 . - . ID=g244.t1.exon4;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 3390 3567 . - 2 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 3127 3275 . - . ID=g244.t1.exon5;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 3127 3275 . - 1 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 2705 3035 . - . ID=g244.t1.exon6;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 2705 3035 . - 2 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 2191 2613 . - . ID=g244.t1.exon7;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 2191 2613 . - 1 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . exon 2013 2112 . - . ID=g244.t1.exon8;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . CDS 2043 2112 . - 1 ID=cds.g244.t1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . three_prime_UTR 2013 2042 . - . ID=g244.t1.utr3p1;Parent=g244.t1 NODE_714_length_18742_cov_44.9561 . mRNA 2013 4457 . - . ID=g244.t1.1.5b6be70c;Parent=g244;Name=g244.t1 NODE_714_length_18742_cov_44.9561 . five_prime_UTR 4379 4457 . - . ID=g244.t1.1.5b6be70c.utr5p1;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 4210 4457 . - . ID=g244.t1.1.5b6be70c.exon1;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 4210 4378 . - 0 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 3985 4093 . - . ID=g244.t1.1.5b6be70c.exon2;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 3985 4093 . - 2 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 3673 3878 . - . ID=g244.t1.1.5b6be70c.exon3;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 3673 3878 . - 1 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 3390 3567 . - . ID=g244.t1.1.5b6be70c.exon4;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 3390 3567 . - 2 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 3127 3275 . - . ID=g244.t1.1.5b6be70c.exon5;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 3127 3275 . - 1 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 2705 3035 . - . ID=g244.t1.1.5b6be70c.exon6;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 2705 3035 . - 2 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . exon 2013 2613 . - . ID=g244.t1.1.5b6be70c.exon7;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . CDS 2043 2613 . - 1 ID=cds.g244.t1.1.5b6be70c;Parent=g244.t1.1.5b6be70c NODE_714_length_18742_cov_44.9561 . three_prime_UTR 2013 2042 . - . ID=g244.t1.1.5b6be70c.utr3p1;Parent=g244.t1.1.5b6be70c #PROT g244.t1 g244 MSSVYYKFKSSKDYDSVTFDGPGITLRELKCAIVAQKKLSKAVDFDLEVTNAQTEEEYKEDSCTIPKNTSVVVKRVPASANSGGLSNYASTTKQIAPFPTPVASASGGAMPVTEEEKMSAIIEQSSAGTDNFQGRRPPPYAQRFPGRPPPPTYICFRCGQGGHFIQNCPTNGRQDFDMVKVKRATGIPRSFLKTVDNPDEASKKGALLTSEGGFVVMQVNDGEFERQLRMGSMATMASQAVPPEYQCPICKGLIRDAVQVPCCGKNFCDECITSHLVEGDRYQCYSCHSEGITPDKLEPNRILRKEVNEHRLGQRMDAPRQSAPVGHPSGLPPPALASSVVAPPLSEDIRPPPPRDEASVSMPVSTAPDRPIILPQNGVSISRPVSDPRVGLGAPPVGMNANFGAASMGWQNAPGAPSYPPFNGPVIGFPPPMDAMMMHAHAHAHAQAIRAQAMQRPVPLPVGYNPYSTPNSYIHPPDTRDNRRDARENRDRDRRDYRDRDRRNDRRDHHQDDGARGDDQDRYSYSKRERDDHYDEDSRSRKRR* #PROT g244.t1.1.5b6be70c g244 MSSVYYKFKSSKDYDSVTFDGPGITLRELKCAIVAQKKLSKAVDFDLEVTNAQTEEEYKEDSCTIPKNTSVVVKRVPASANSGGLSNYASTTKQIAPFPTPVASASGGAMPVTEEEKMSAIIEQSSAGTDNFQGRRPPPYAQRFPGRPPPPTYICFRCGQGGHFIQNCPTNGRQDFDMVKVKRATGIPRSFLKTVDNPDEASKKGALLTSEGGFVVMQVNDGEFERQLRMGSMATMASQAVPPEYQCPICKGLIRDAVQVPCCGKNFCDECITSHLVEGDRYQCYSCHSEGITPDKLEPNRILRKEVNEHRLGQRMDAPRQSAPVGHPSGLPPPALASSVVAPPLSEDIRPPPPRDEASVSMPVSTAPDRPIILPQNGVSISRPVSDPRVGLGAPPVGMNANFGAASMGWQNAPGAPSYPPFNGPVIGFPPPMDAMMMHAHAHAHAQAIRAQAMQRPVPLPVGYNPYSTPNSYIHPPDTRDNRRDARENRDRDRRDYRDRDRRNDRRDHHQDDGARGDDQDRCVKFHGCIDLIHAFFKISFHRNCERRYSYSKRERDDHYDEDSRSRKRR* # ORIGINAL: g9888.t1 original gene structure, not modified by PASA NODE_3615_length_3113_cov_37.2159 AUGUSTUS gene 54 2563 . - . ID=g9888;Name=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS mRNA 54 2563 . - . ID=g9888.t1;Parent=g9888;Name=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 2359 2563 . - . ID=g9888.t1.exon1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 2359 2563 . - 0 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 2092 2126 . - . ID=g9888.t1.exon2;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 2092 2126 . - 2 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 1464 1943 . - . ID=g9888.t1.exon3;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 1464 1943 . - 0 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 1206 1367 . - . ID=g9888.t1.exon4;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 1206 1367 . - 0 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 818 926 . - . ID=g9888.t1.exon5;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 818 926 . - 0 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 449 606 . - . ID=g9888.t1.exon6;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 449 606 . - 2 ID=cds.g9888.t1;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS exon 54 245 . - . ID=g9888.t1.exon7;Parent=g9888.t1 NODE_3615_length_3113_cov_37.2159 AUGUSTUS CDS 54 245 . - 0 ID=cds.g9888.t1;Parent=g9888.t1 #PROT g9888.t1 g9888 MNAPASRASPRGNKATKAPPAKASNQSRTRTSAAATEDAEEGIPKVMDTHVTAKSGRGAGVHADGRRHALTTKDGENVEKVEHEEQIHNMCNPDEQQQTHPASVDEGHDAESTTGTKAIKKEEKQDGSVTQEDGVGAREPQSNAQERGHALDNVKGEDETQGKQHEQPTVAPSNAAESAESADGEKSRTEEGDEGASSKGKGPEKSGKKKLETRPLEVKGDVKMLERGKIFFFYKPKVMREEVHGIDDVQRLHLILEVTDGASKGIARLVLVAKKKLPDVHTGKKRPYFGFVEEVRRDVHELIEDHLEKEEYETKTRGFRTLEAARLAGEGVYALVDHHGHTHLTYILELPKEVGEAQEALNIQPEGSYVLQVKNPEQPSPPGVGLGAHSKAQYSPELQGVFASRRFVSANPIDFLNFEHCELLLIGASDDLAGELGEMGAEIEQLK # ORIGINAL: g13985.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 5706 10780 . + . ID=g13985;Name=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 5706 10780 . + . ID=g13985.t1;Parent=g13985;Name=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 5706 6512 . + . ID=g13985.t1.exon1;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 5706 6512 . + 0 ID=cds.g13985.t1;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 6911 7030 . + . ID=g13985.t1.exon2;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 6911 7030 . + 0 ID=cds.g13985.t1;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 7432 7598 . + . ID=g13985.t1.exon3;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 7432 7598 . + 0 ID=cds.g13985.t1;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 7831 8410 . + . ID=g13985.t1.exon4;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 7831 8410 . + 1 ID=cds.g13985.t1;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 8624 10780 . + . ID=g13985.t1.exon5;Parent=g13985.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 8624 10780 . + 0 ID=cds.g13985.t1;Parent=g13985.t1 #PROT g13985.t1 g13985 MGRKIKKSEIVKKDKHTANAESNAAHDAAKSVLSKELLAEDDYAYGHGGASNAAVLPSKRKADDDDDGDDAVEQEPKRRKLTAKRRKQLERVVAKKKKKAIRADLLESLAKSALDPSQMAMLRPTARLGQGKETAKDRMRRRLQEERAGIAGDDDQSRLYKKHTGPIVYEDVGIPGTKKKSAGDDASSDGSDSSGDEESGNDEDAMEVDVADGKGGAKGDKVTPAAEVYPTGEMAARTAAARNERPVRTPITAEDRIKAFYVNVKRDAKVQEGRLQLPILAEEQRIMEAIRENDVVVICGETGSGKTTQVPQFLYEAGYGSLSPESPHKGMIGITEPRRVAAISMAGRVAKELNLPQKEVSYQIRYEATAGASTSIKFMTDGVLLKEIESDFLLQKYSAIIIDEAHERSVNTDVLIGLLSRIVPLRAKLCAEDKRRQADLAVQLQKEKEAKDKEALRAAAAVFRGKPSDKPKHSQGNVITGGNSVNTSTAGAPTTASVQPLKLIIMSATLRVEDFAGNRGLFPTPPPVISVDARQHPVTVHFNKRTELVDYTEEAFKKVCKIHKKLPAGGVLVFVTGQNEVNTLCRKLRQRFPPKQVLHASSKLHGKKPAAPAKIDLDSFSVKPTPRSVTAASSSFGDDSGGLLDDMDADADLDVLGDEDDFTAAGDAAADDYSDDDSDASASEEEVEGGAAPDAEEDGPWGHDDGSNVLVRGGPLFVLPLYSILPSAQQMKVFDAPPPGKRLVVVATNVAETSLTIPNIRYVVDTGRVKQRLHDARTGIASFEIGWTSRASADQRAGRAGRTGPGHCYRLYSSAVFGNQFQQFSDPEILRMPIDGLVLQMRAMGIDNPIGFPFPTPPEKDALIAADNLLRTLGAIDSMNGRVTDVGRRMAKFPLAPRYSRMVATGLEDGLVAHVIAMVAALTVGEIYAYDSNDAEAEAAMDDADDDEVVIRKRRLGAAAKARAKFATEGTDSDVLGMLRAVGAWEYSGGTEEFCGQNGLRHKAMVEIRKLRRQLTDISNEVSLSPSAQLVDLDPKMKPPTQKQMCELRKVILAGFGDRVAKRAPPSDADGKRPAYHSVAAEERVYIHPSSSLLRASPEMIVYHEIIETTRPYMRLITKIDPLWLASIVPSVCTFGKPLENPAPMYDAATDRLRCHIGGTYGPHLWPLPAQAMDYPPCADRYKWFARFLLEGKIVPALGEFTDKLLSQPIVMNKGWAQERIAAILQVLVDAGVHTKAGLVAKWKEDPRYLLQAYSLWVNRGYHAQLLAIWPPVESK* # PASA_UPDATE: g13990.t1, single gene model update, valid-1, status:[pasa:asmbl_6676,status:3], valid-1 NODE_387_length_25081_cov_49.1942 . gene 21172 24869 . - . ID=g13990;Name=g13990.t1 NODE_387_length_25081_cov_49.1942 . mRNA 21172 24869 . - . ID=g13990.t1;Parent=g13990;Name=g13990.t1 NODE_387_length_25081_cov_49.1942 . five_prime_UTR 24793 24869 . - . ID=g13990.t1.utr5p1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . five_prime_UTR 24316 24394 . - . ID=g13990.t1.utr5p2;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 24793 24869 . - . ID=g13990.t1.exon1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 24213 24394 . - . ID=g13990.t1.exon2;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 24213 24315 . - 0 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 23906 23989 . - . ID=g13990.t1.exon3;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 23906 23989 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 23530 23661 . - . ID=g13990.t1.exon4;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 23530 23661 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 23201 23274 . - . ID=g13990.t1.exon5;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 23201 23274 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 22923 23007 . - . ID=g13990.t1.exon6;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 22923 23007 . - 0 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 22575 22631 . - . ID=g13990.t1.exon7;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 22575 22631 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 22381 22464 . - . ID=g13990.t1.exon8;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 22381 22464 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 22144 22209 . - . ID=g13990.t1.exon9;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 22144 22209 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . exon 21172 21929 . - . ID=g13990.t1.exon10;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . CDS 21685 21929 . - 2 ID=cds.g13990.t1;Parent=g13990.t1 NODE_387_length_25081_cov_49.1942 . three_prime_UTR 21172 21684 . - . ID=g13990.t1.utr3p1;Parent=g13990.t1 #PROT g13990.t1 g13990 MGQTLSEPVTEKHTTKGGDNRMQWAASCMQGWRVSMEDAHTTLLRVPGDDNAAFFAVYDGHGGAKVAKYAGEWVHTKIVNNPEYLKGNYEGAIQHGFLKADEDILCDSSMKNVTSGSTAVCVLIKDKKMFCGNAGDSRCIISSAGANIPMSFDHKPVNEGESQRITAAGGFVEFGRVNGNLALSRAIGDFEFKTNPAMSAQDQIVTVFPDVITRPLTDKEEFLVLACDGIWDVMSNQDVVDFVRQRIARALPLDRIVEELLDACLAPESHIGGVGCDNMTAVIVGFLPNGSYDELVKKCQRPAETPAAN* # ORIGINAL: g13983.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 2476 3528 . - . ID=g13983;Name=g13983.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 2476 3528 . - . ID=g13983.t1;Parent=g13983;Name=g13983.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 2476 3528 . - . ID=g13983.t1.exon1;Parent=g13983.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 2476 3528 . - 0 ID=cds.g13983.t1;Parent=g13983.t1 #PROT g13983.t1 g13983 MTSLRLKGFKLGDNHAYNCVWTTFLDIADDNNLGWSPEVIDDSRCEFAGSASHACLLVSSHAEASLGFIDCDSGIVAASIELRPPSTSLQSARAVCFASAFGLLAVGFDDESVRVYRRCASGVGIGGAVDTAGGLWKELLITSGGAVLPADNMISSLSLSADVLVVYGVSCVALLRVTAAEVHATASIRTGGMHVAANPSVGVVVAGGVSSVRMLRTARASLTIAGRGEEKSITGCTPAEYVTLPPGHLGNVKMDSQRIAYPLDMLGGGFVVIDFVPVCAGCGDSMEQPHPSGDDDSVHDSTRQEDADAAGCDECGVWNCCSRACFVRNRDAHAAECVAKWSVRMPFYAM* # ORIGINAL: g13986.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 11121 12649 . - . ID=g13986;Name=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 11121 12649 . - . ID=g13986.t1;Parent=g13986;Name=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 12647 12649 . - . ID=g13986.t1.exon1;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 12647 12649 . - 0 ID=cds.g13986.t1;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 12133 12374 . - . ID=g13986.t1.exon2;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 12133 12374 . - 0 ID=cds.g13986.t1;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 11771 11937 . - . ID=g13986.t1.exon3;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 11771 11937 . - 1 ID=cds.g13986.t1;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 11121 11365 . - . ID=g13986.t1.exon4;Parent=g13986.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 11121 11365 . - 2 ID=cds.g13986.t1;Parent=g13986.t1 #PROT g13986.t1 g13986 MSGVTLEHFSRSARCNNTRENKVLREETSQLRHRLHHGGGGGGGVGGTSSRSQSPLAHSVGNNGVVLITPAMFGAQFPQRSDHVLFRKQFGGNTSMCWLTDKITFSYQVAAFRTERDASADAPEYPRRTVAPVLAPHATATTTGFQTPMMGTPGMQKPAPRGPPPGASPHSSSSPLRTPQWDPNAKRMVQMVYVGNQPGRLPAMSTPVMTPRPTTARR* # ORIGINAL: g13987.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 13897 16435 . + . ID=g13987;Name=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 13897 16435 . + . ID=g13987.t1;Parent=g13987;Name=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 13897 13927 . + . ID=g13987.t1.exon1;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 13897 13927 . + 0 ID=cds.g13987.t1;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 14055 14426 . + . ID=g13987.t1.exon2;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 14055 14426 . + 2 ID=cds.g13987.t1;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 15008 15227 . + . ID=g13987.t1.exon3;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 15008 15227 . + 2 ID=cds.g13987.t1;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 15599 15653 . + . ID=g13987.t1.exon4;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 15599 15653 . + 1 ID=cds.g13987.t1;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 15899 16435 . + . ID=g13987.t1.exon5;Parent=g13987.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 15899 16435 . + 0 ID=cds.g13987.t1;Parent=g13987.t1 #PROT g13987.t1 g13987 MASRCSSILLASTMRVRATAIPAGRIASANPRFVVAVPFRAVPLRAFQTTGIRLDLDGDFVSAQADVKKTSPSNDQLLQLYSLFKQATAGNNSTEQPSKFNFVARAKWDAWEKLKNTSSEDAKKQYVALVKQLQGGEKSEAKVPAPGTFNDILVTNKDGLFTITFNRPNRKNAFAWTTYREIVDALKLAADDDTVVATLVTGTGDMYSSGNDLSNFANIPAEGPEKMAADGRAVLKEFVNAFIHFPKLLIGAVNGPAIGVSVTVLGLFDVVYCSDKAYFSTPFTQLGQSPEGCSSYTFPRILGQSLANEVLLLNHKLTAAEAKTAGFVSQVFPSATFAQDVHDRAVAASKLPPQSMRLSRNLIKKDRAVLEAVNEEECQLLEKRWLSDECMSAIMAFLSRGKSH* # ORIGINAL: g13989.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 19993 20731 . + . ID=g13989;Name=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 19993 20731 . + . ID=g13989.t1;Parent=g13989;Name=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 19993 20169 . + . ID=g13989.t1.exon1;Parent=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 19993 20169 . + 0 ID=cds.g13989.t1;Parent=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 20410 20536 . + . ID=g13989.t1.exon2;Parent=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 20410 20536 . + 0 ID=cds.g13989.t1;Parent=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 20694 20731 . + . ID=g13989.t1.exon3;Parent=g13989.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 20694 20731 . + 2 ID=cds.g13989.t1;Parent=g13989.t1 #PROT g13989.t1 g13989 MSHIIYRNTTIGDTLQETLDEFTNSKAITAEISLKIMSQFDKSLMHVMNQMVRNRVTIKGKLKTYRNYDNVWTFVVDQASVKAESDTTKYDHIRIIAAGTKDEDGKEISIVAD* # PASA_UPDATE: g13988.t1, single gene model update, valid-1, status:[pasa:asmbl_6675,status:3], valid-1 NODE_387_length_25081_cov_49.1942 . gene 17115 19534 . - . ID=g13988;Name=g13988.t1 NODE_387_length_25081_cov_49.1942 . mRNA 17115 19534 . - . ID=g13988.t1;Parent=g13988;Name=g13988.t1 NODE_387_length_25081_cov_49.1942 . five_prime_UTR 19463 19534 . - . ID=g13988.t1.utr5p1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 19442 19534 . - . ID=g13988.t1.exon1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 19442 19462 . - 0 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 19139 19221 . - . ID=g13988.t1.exon2;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 19139 19221 . - 0 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 18860 18983 . - . ID=g13988.t1.exon3;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 18860 18983 . - 1 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 18527 18628 . - . ID=g13988.t1.exon4;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 18527 18628 . - 0 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 18151 18294 . - . ID=g13988.t1.exon5;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 18151 18294 . - 0 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . exon 17115 17480 . - . ID=g13988.t1.exon6;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . CDS 17205 17480 . - 0 ID=cds.g13988.t1;Parent=g13988.t1 NODE_387_length_25081_cov_49.1942 . three_prime_UTR 17115 17204 . - . ID=g13988.t1.utr3p1;Parent=g13988.t1 #PROT g13988.t1 g13988 MSSIGTGYDLSATTFSPDGRVFQVEYATKAVENSGTAIGVRVKDGVVFGVEKLIISKLLETTSNKRIFTVDRHIGAAIAGLVADARQIVNKARTEAADYRAFYTTQMPLKVLTQRVSGFVQAYTLYSSVRPFGASVLLGTYDSDGPQLFMIEPSGVSWGYYGCAIGKGRQAAKTELEKLKLGELTCREAIKEVARIIHSIHDDVKDKEFELEMSWVCEETAGRHQLVPKDIISEAEAHAKAVLEAAEQD* # ORIGINAL: g13982.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 961 2010 . - . ID=g13982;Name=g13982.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 961 2010 . - . ID=g13982.t1;Parent=g13982;Name=g13982.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 961 2010 . - . ID=g13982.t1.exon1;Parent=g13982.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 961 2010 . - 0 ID=cds.g13982.t1;Parent=g13982.t1 #PROT g13982.t1 g13982 MADFTRCDSVASAPGLLSLPNEVIAMDIARHLGSVDIASVSQVSARLRQLFLHTRTFSLRREPSMRYYSESNFRLLVRETLPIDRLEINMSGADLSLTLGDVAAFADVFSLDLEETMASDASQLGNVHILNLSATPVDDVAALGHVHTLFLRDCDDLEDVSALTDVHTLDLNFSCSVVDVSSLGRVHWLNLSDCELVTDVSALGRVHTLNLSRCREIQDVSALGHVHTLILSDCRGIDDVSALGGVHHLDLSWCKNVWNVSALGRVHTLLLRSCKKVVRVSSLTHVHTLDLGETKVNDSSALGNTHFLDLFNTNVTDLSALGHVPHLTCPDGTRRENGCCMCVRACMDV* # ORIGINAL: g13984.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 4433 5123 . - . ID=g13984;Name=g13984.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 4433 5123 . - . ID=g13984.t1;Parent=g13984;Name=g13984.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 5046 5123 . - . ID=g13984.t1.exon1;Parent=g13984.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 5046 5123 . - 0 ID=cds.g13984.t1;Parent=g13984.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 4433 4933 . - . ID=g13984.t1.exon2;Parent=g13984.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 4433 4933 . - 0 ID=cds.g13984.t1;Parent=g13984.t1 #PROT g13984.t1 g13984 METLPDECILCILAHCDTSDVLAIAQTSRRFHRVANDNAIWRHLTLLTYGSSLRRVWRQCGRQSGLECFPSNGWLSADESRWDVEVLRALEAGSNTIRSTFMYGCREDGDSMAPHGNEAIAFRRRMYSVDASDPTAVDWKVVYRRKCATDLAWIRGIYTARVCCAEVRAHYCTSGDEVALFRPGNVWHMITD* # ORIGINAL: g13981.t1 original gene structure, not modified by PASA NODE_387_length_25081_cov_49.1942 AUGUSTUS gene 98 242 . + . ID=g13981;Name=g13981.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS mRNA 98 242 . + . ID=g13981.t1;Parent=g13981;Name=g13981.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS exon 98 242 . + . ID=g13981.t1.exon1;Parent=g13981.t1 NODE_387_length_25081_cov_49.1942 AUGUSTUS CDS 98 242 . + 1 ID=cds.g13981.t1;Parent=g13981.t1 #PROT g13981.t1 g13981 LCVNLVEQKEYASIYTHDRTSSVADSLSKTKISDAARAKDAERESAK* # PASA_UPDATE: g9857.t1, single gene model update, valid-1, status:[pasa:asmbl_7400,status:12], valid-1 NODE_4512_length_1520_cov_32.7862 . gene 225 1513 . + . ID=g9857;Name=g9857.t1 NODE_4512_length_1520_cov_32.7862 . mRNA 225 1513 . + . ID=g9857.t1;Parent=g9857;Name=g9857.t1 NODE_4512_length_1520_cov_32.7862 . five_prime_UTR 225 225 . + . ID=g9857.t1.utr5p1;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . exon 225 390 . + . ID=g9857.t1.exon1;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . CDS 226 390 . + 0 ID=cds.g9857.t1;Parent=g9857.t1;5_prime_partial=true NODE_4512_length_1520_cov_32.7862 . exon 612 752 . + . ID=g9857.t1.exon2;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . CDS 612 752 . + 0 ID=cds.g9857.t1;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . exon 944 1513 . + . ID=g9857.t1.exon3;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . CDS 944 1189 . + 0 ID=cds.g9857.t1;Parent=g9857.t1 NODE_4512_length_1520_cov_32.7862 . three_prime_UTR 1190 1513 . + . ID=g9857.t1.utr3p1;Parent=g9857.t1 #PROT g9857.t1 g9857 LDHAHVEYFRGLQNPIGVKVGPSTDPNELVELIRRLDPLRLPGKITIITRYGAAKVDDCLPKHIKAVTDAGLKVVWCCDPMHGNTENTSNGMKTRNFDKILEELRRTFAIHKSLNRQLNGVHFELTGDPVTECTGGSSNLSEADLTKNYQTFCDPRLNYDQSMDMALLIAEYYQKERSAVRHL* # ORIGINAL: g4800.t1 original gene structure, not modified by PASA NODE_3147_length_4197_cov_40.7984 AUGUSTUS gene 56 654 . + . ID=g4800;Name=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS mRNA 56 654 . + . ID=g4800.t1;Parent=g4800;Name=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 56 200 . + . ID=g4800.t1.exon1;Parent=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 56 200 . + 2 ID=cds.g4800.t1;Parent=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 371 461 . + . ID=g4800.t1.exon2;Parent=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 371 461 . + 1 ID=cds.g4800.t1;Parent=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 616 654 . + . ID=g4800.t1.exon3;Parent=g4800.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 616 654 . + 0 ID=cds.g4800.t1;Parent=g4800.t1 #PROT g4800.t1 g4800 AWRDISSHEWRLKELTMPEESMHNYLLMQIFRAQRNCYITGFSMVALIVIDRLASLLGELASRDDLLERVQADLAVAKLTPQKKQAKSNE* # ORIGINAL: g4801.t1 original gene structure, not modified by PASA NODE_3147_length_4197_cov_40.7984 AUGUSTUS gene 874 2045 . - . ID=g4801;Name=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS mRNA 874 2045 . - . ID=g4801.t1;Parent=g4801;Name=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 1602 2045 . - . ID=g4801.t1.exon1;Parent=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 1602 2045 . - 0 ID=cds.g4801.t1;Parent=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 1328 1485 . - . ID=g4801.t1.exon2;Parent=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 1328 1485 . - 0 ID=cds.g4801.t1;Parent=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS exon 874 1021 . - . ID=g4801.t1.exon3;Parent=g4801.t1 NODE_3147_length_4197_cov_40.7984 AUGUSTUS CDS 874 1021 . - 1 ID=cds.g4801.t1;Parent=g4801.t1 #PROT g4801.t1 g4801 MAEVESVPREARPLPSQRHVAFASTVRVDPLDITMVEDGFARDGTDSASHTFLEHFVDDMDEQRLNGMKGASENHGRIESDDNTERGAASLFSRPRLHSSLWVEKELRQVRAEQFDAVLHSADATALRPLATNGENWDVDTKRKQKSKTLNVDSKRSIYAGLTPINVSADAIVDKYVPAVRPPKKSTPPVIAEEMTRLRRYVTRDLETDAPLRFDPVRVPPFNPVRIVFDNNSYLRRHIAIASGFGHAS* # ORIGINAL: g4220.t1 original gene structure, not modified by PASA NODE_3357_length_3658_cov_55.1979 AUGUSTUS gene 279 1021 . - . ID=g4220;Name=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS mRNA 279 1021 . - . ID=g4220.t1;Parent=g4220;Name=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS exon 893 1021 . - . ID=g4220.t1.exon1;Parent=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS CDS 893 1021 . - 0 ID=cds.g4220.t1;Parent=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS exon 630 761 . - . ID=g4220.t1.exon2;Parent=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS CDS 630 761 . - 0 ID=cds.g4220.t1;Parent=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS exon 279 386 . - . ID=g4220.t1.exon3;Parent=g4220.t1 NODE_3357_length_3658_cov_55.1979 AUGUSTUS CDS 279 386 . - 0 ID=cds.g4220.t1;Parent=g4220.t1 #PROT g4220.t1 g4220 MTKPARASAAKSAKRPRDDVEQIGQDADALFAEEKELQRAIAQLELEIAELEEAENTKGDAGDDGQLIAPELEVEEFAPPPFCVPIRANVLSFDFRSLAAASQFDVIMMDPPWQLAGHAPTRG # PASA_UPDATE: g5267.t1, single gene model update, valid-1, status:[pasa:asmbl_3959,status:12],[pasa:asmbl_3960,status:12], valid-1 NODE_2295_length_6828_cov_41.045 . gene 3127 4232 . + . ID=g5267;Name=g5267.t1 NODE_2295_length_6828_cov_41.045 . mRNA 3127 4232 . + . ID=g5267.t1;Parent=g5267;Name=g5267.t1 NODE_2295_length_6828_cov_41.045 . five_prime_UTR 3127 3158 . + . ID=g5267.t1.utr5p1;Parent=g5267.t1 NODE_2295_length_6828_cov_41.045 . exon 3127 4232 . + . ID=g5267.t1.exon1;Parent=g5267.t1 NODE_2295_length_6828_cov_41.045 . CDS 3159 3878 . + 0 ID=cds.g5267.t1;Parent=g5267.t1 NODE_2295_length_6828_cov_41.045 . three_prime_UTR 3879 4232 . + . ID=g5267.t1.utr3p1;Parent=g5267.t1 #PROT g5267.t1 g5267 MPPKSAASPKAKAPKAAPKAKAAHPPYSKLIEEAIVALKERSGSSRQAITKYIQTKYPATADRAVLQVKAALKKGVTAGKFSQTSGTGATGSFKLAKAEAKPKAVKAKKAAASPKKAAAPKAKKAASPKKAKAAPKAKKAAAPKAKKAAAPKAKKEAAPAAAPAAPAAAAPAAEKKASPKKAAPKKAAAPKKEKAAAKKASPKKAAAPKEKKAAAPKAEKKAAAPKAKKAAPKKAEKKE* # PASA_UPDATE: g5268.t1, single gene model update, valid-1, status:[pasa:asmbl_3961,status:12], valid-1 NODE_2295_length_6828_cov_41.045 . gene 4577 6198 . + . ID=g5268;Name=g5268.t1 NODE_2295_length_6828_cov_41.045 . mRNA 4577 6198 . + . ID=g5268.t1;Parent=g5268;Name=g5268.t1 NODE_2295_length_6828_cov_41.045 . five_prime_UTR 4577 4619 . + . ID=g5268.t1.utr5p1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . exon 4577 4743 . + . ID=g5268.t1.exon1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . CDS 4620 4743 . + 0 ID=cds.g5268.t1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . exon 4874 4968 . + . ID=g5268.t1.exon2;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . CDS 4874 4968 . + 2 ID=cds.g5268.t1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . exon 5109 5171 . + . ID=g5268.t1.exon3;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . CDS 5109 5171 . + 0 ID=cds.g5268.t1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . exon 5442 5594 . + . ID=g5268.t1.exon4;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . CDS 5442 5594 . + 0 ID=cds.g5268.t1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . exon 5903 6198 . + . ID=g5268.t1.exon5;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . CDS 5903 6061 . + 0 ID=cds.g5268.t1;Parent=g5268.t1 NODE_2295_length_6828_cov_41.045 . three_prime_UTR 6062 6198 . + . ID=g5268.t1.utr3p1;Parent=g5268.t1 #PROT g5268.t1 g5268 MDSPKHLYALLGALARRSLFGDTSITKGELKAELFPDVAEEEFAQRCQQYEELLASIASEDMDFTHAEAFLRQAGLDDVQVEVFVRLWKAQRTKIHETLVGKATWNNRLEAFNWRLDVKTKSRHVAQLNDPAAILELKIADPIAKTSELVRFEVDQQKLAFLRGQVEAIEKAITSVASVDAKPQVRPKPRSASQAAE* # PASA_UPDATE: g5266.t1, single gene model update, valid-1, status:[pasa:asmbl_3958,status:12], valid-1 NODE_2295_length_6828_cov_41.045 . gene 411 701 . + . ID=g5266;Name=g5266.t1 NODE_2295_length_6828_cov_41.045 . mRNA 411 701 . + . ID=g5266.t1;Parent=g5266;Name=g5266.t1 NODE_2295_length_6828_cov_41.045 . exon 411 701 . + . ID=g5266.t1.exon1;Parent=g5266.t1 NODE_2295_length_6828_cov_41.045 . CDS 411 623 . + 0 ID=cds.g5266.t1;Parent=g5266.t1;5_prime_partial=true NODE_2295_length_6828_cov_41.045 . three_prime_UTR 624 701 . + . ID=g5266.t1.utr3p1;Parent=g5266.t1 #PROT g5266.t1 g5266 AHLYRGSFPMHYDVPETTGEWQVDVNNRFSWAMEQGKRRGFFHTGEVIIGIQGWTGGPQHTNTMRVLTVE* # ORIGINAL: g6560.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 7524 10348 . + . ID=g6560;Name=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 7524 10348 . + . ID=g6560.t1;Parent=g6560;Name=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 7524 7794 . + . ID=g6560.t1.exon1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 7524 7794 . + 0 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 7924 8288 . + . ID=g6560.t1.exon2;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 7924 8288 . + 2 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 8776 8862 . + . ID=g6560.t1.exon3;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 8776 8862 . + 0 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 8992 9229 . + . ID=g6560.t1.exon4;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 8992 9229 . + 0 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 9434 9575 . + . ID=g6560.t1.exon5;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 9434 9575 . + 2 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 9736 9850 . + . ID=g6560.t1.exon6;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 9736 9850 . + 1 ID=cds.g6560.t1;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 10163 10348 . + . ID=g6560.t1.exon7;Parent=g6560.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 10163 10348 . + 0 ID=cds.g6560.t1;Parent=g6560.t1 #PROT g6560.t1 g6560 MERPRGLRRSNADKRRHEDSTRDDAANTANTGNTGNAAAAEGADESRPAKVRKTDETDTAAASVDADDTDDASADPAELIAMYSEALEVMAGGDRALGIQLLEGAVNGFEELLHGDSAGEGAGVKGDDSASTRVEVAQQAEKTGGVEGTGRVVLLRYAAKCWCDIGMAHATDIPALCAEYLEMAADRLAEAVRTDPTNGDALFEAAVATIRRHTFLREAAAGHDESDSSDAEDDDAADTAETERSPGEFAAVDTATANAETCLAAALSGRATSPALTVHLVDDAPSFLASHLLDYALTLGGDRFVAYATRARKHFEDAVAGARAAGVASSGGKGSSADVANALIALAVCLSDVGGALENTDADAAHAWFSFMQSCLCRVPAALERAGEALTLCGGEPSLEARCHKVIGEAHINIGNGTADSNAARECYRKAAQSLRAANNADDGCVPTDAIDDVLQLAEGDTSDDHE* # ORIGINAL: g6557.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 972 3181 . + . ID=g6557;Name=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 972 3181 . + . ID=g6557.t1;Parent=g6557;Name=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 972 1034 . + . ID=g6557.t1.exon1;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 972 1034 . + 0 ID=cds.g6557.t1;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 1270 1426 . + . ID=g6557.t1.exon2;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 1270 1426 . + 0 ID=cds.g6557.t1;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 1704 1813 . + . ID=g6557.t1.exon3;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 1704 1813 . + 2 ID=cds.g6557.t1;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 2123 2320 . + . ID=g6557.t1.exon4;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 2123 2320 . + 0 ID=cds.g6557.t1;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 2990 3181 . + . ID=g6557.t1.exon5;Parent=g6557.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 2990 3181 . + 0 ID=cds.g6557.t1;Parent=g6557.t1 #PROT g6557.t1 g6557 MDTGELDRDAVARDPLSVCLTAGGVAGALVDITLFPLDTLKTRLQSPRGFAASGGFKGMYAGLGPAAIASVPSASTFWLSYEFFKGRLADAFPSANASAVHMAAASFGEVSACVVRVPAEVLKQRLQARMHPTFGETLRDLIATNGVRGLYRGFASTVVREIPFSLIQFPLYERLKKSQGVGQYSGVVRTAVRIAQESGIRGLFAGVAPRTIWISIGGAVFFGGYEQTKQLLRTVAPPR* # ORIGINAL: g6565.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 30384 32177 . + . ID=g6565;Name=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 30384 32177 . + . ID=g6565.t1;Parent=g6565;Name=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 30384 30551 . + . ID=g6565.t1.exon1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 30384 30551 . + 0 ID=cds.g6565.t1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 30655 30857 . + . ID=g6565.t1.exon2;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 30655 30857 . + 0 ID=cds.g6565.t1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 31089 31174 . + . ID=g6565.t1.exon3;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 31089 31174 . + 1 ID=cds.g6565.t1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 31502 31633 . + . ID=g6565.t1.exon4;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 31502 31633 . + 2 ID=cds.g6565.t1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 31755 31807 . + . ID=g6565.t1.exon5;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 31755 31807 . + 2 ID=cds.g6565.t1;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 32049 32177 . + . ID=g6565.t1.exon6;Parent=g6565.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 32049 32177 . + 0 ID=cds.g6565.t1;Parent=g6565.t1 #PROT g6565.t1 g6565 MTQPISVAGDDGAALDAHVSALVAQQAACVASLFSVADELAGLYASHPVLATAYIDEFVREGRSDVSSGATGDDAGCDGENNGLPSDVPARVLCVRDGCHVLGLRHALRRVPSDYYDWALERRRDALSAPSVRHLCKTIVMENTYSTATDCSEDVLRFVRGLKNPQLPKKRFNFRLCDPAVALALTGFENGAVSPIGMTTKVPIILSAEVLRLQPRMIWLGGGHMDWKLGVSVDEFVAATACFVGSVVFAGVEGTD* # PASA_UPDATE: g6566.t1, single gene model update, valid-1, status:[pasa:asmbl_1101,status:12], valid-1 NODE_128_length_37030_cov_39.6932 . gene 32220 36966 . - . ID=g6566;Name=g6566.t1 NODE_128_length_37030_cov_39.6932 . mRNA 32220 36966 . - . ID=g6566.t1;Parent=g6566;Name=g6566.t1 NODE_128_length_37030_cov_39.6932 . five_prime_UTR 36567 36966 . - . ID=g6566.t1.utr5p1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 36310 36966 . - . ID=g6566.t1.exon1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 36310 36566 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 35698 35737 . - . ID=g6566.t1.exon2;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 35698 35737 . - 1 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 35542 35565 . - . ID=g6566.t1.exon3;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 35542 35565 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 35372 35425 . - . ID=g6566.t1.exon4;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 35372 35425 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 35053 35203 . - . ID=g6566.t1.exon5;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 35053 35203 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 34772 34850 . - . ID=g6566.t1.exon6;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 34772 34850 . - 2 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 34413 34608 . - . ID=g6566.t1.exon7;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 34413 34608 . - 1 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 34140 34278 . - . ID=g6566.t1.exon8;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 34140 34278 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 33744 33973 . - . ID=g6566.t1.exon9;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 33744 33973 . - 2 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 33459 33513 . - . ID=g6566.t1.exon10;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 33459 33513 . - 0 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 33173 33236 . - . ID=g6566.t1.exon11;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 33173 33236 . - 2 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 32842 32871 . - . ID=g6566.t1.exon12;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 32842 32871 . - 1 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . exon 32220 32627 . - . ID=g6566.t1.exon13;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . CDS 32327 32627 . - 1 ID=cds.g6566.t1;Parent=g6566.t1 NODE_128_length_37030_cov_39.6932 . three_prime_UTR 32220 32326 . - . ID=g6566.t1.utr3p1;Parent=g6566.t1 #PROT g6566.t1 g6566 MAGYVQQEDILMATLTVRETLYFAAELRLEQSLPAAERAARVVEVLEELGLEGCADTVIGGRLRRGISGGQAKRVNMGLELITRPSILFLDEPTSGLDSATSYDVMKVVRDLCQRGRTVICTIHQPSTETFRLFNKLLLLVAGRLVYLGDVSSAIDYFVGFGFEKPPSMNPAEFLVSVTGPGTGQEESLVKGPIVDEHFFAREWAKSTLASLRLVSAAQAAHVEPLVLVPARALYANGVFHEFVTLVRRTFRGRMRDSAFFAVGLGKNLTLSLIMMTIYLNSPSTFSGMRDLFSVMFLTIVIIGLSAFDHMSGLLEDRVLYYRENGSACYRPISYFLSSWVVDLPFSLLGTVVFSVVLYYAVGFNPAFEAFIYFNVMLAVTQEIGVTFGQVIACVSRNLDMATAAMNTVFTIWILFSGFGINPASMPKFWLWAYYTSFFRYAMEGLSGNEFDGRWFGVCGTVINGTCAYDPSAVNPDSQPFCLPRDGVVCEFSGSAFSMSLFDGTLINKWLCVLIVIGLDLGFRLLGYLALVHVRYDKR* # PASA_UPDATE: g6562.t1, single gene model update, valid-1, status:[pasa:asmbl_1100,status:12],[pasa:asmbl_1102,status:12], valid-1 NODE_128_length_37030_cov_39.6932 . gene 11856 22241 . - . ID=g6562;Name=g6562.t1 NODE_128_length_37030_cov_39.6932 . mRNA 11856 22241 . - . ID=g6562.t1;Parent=g6562;Name=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 22168 22241 . - . ID=g6562.t1.exon1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 22168 22241 . - 0 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 21861 21971 . - . ID=g6562.t1.exon2;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 21861 21971 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 21531 21699 . - . ID=g6562.t1.exon3;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 21531 21699 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 21168 21376 . - . ID=g6562.t1.exon4;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 21168 21376 . - 0 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 20504 21014 . - . ID=g6562.t1.exon5;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 20504 21014 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 16942 20255 . - . ID=g6562.t1.exon6;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 16942 20255 . - 0 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 15299 16624 . - . ID=g6562.t1.exon7;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 15299 16624 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 14745 14973 . - . ID=g6562.t1.exon8;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 14745 14973 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 13963 14464 . - . ID=g6562.t1.exon9;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 13963 14464 . - 0 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 13618 13775 . - . ID=g6562.t1.exon10;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 13618 13775 . - 2 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 12974 13478 . - . ID=g6562.t1.exon11;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 12974 13478 . - 0 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 12610 12703 . - . ID=g6562.t1.exon12;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 12610 12703 . - 2 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . exon 11856 12392 . - . ID=g6562.t1.exon13;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . CDS 12104 12392 . - 1 ID=cds.g6562.t1;Parent=g6562.t1 NODE_128_length_37030_cov_39.6932 . three_prime_UTR 11856 12103 . - . ID=g6562.t1.utr3p1;Parent=g6562.t1 #PROT g6562.t1 g6562 MAGRPASSLDEIELGRISDGPSSCAWYHGELSEADSEKLLRRSGDYLLRDDPTGSGLVLSFRSNNGPHHSPVTRSGRLYALFPSQYEVPIRFSKLSDLSTHLAEQPVHDTILHNPIYKGATAVSTLANPMFNMDDGDFDDGEPRYASLATPSATEPKEAYKDARLANLLSLNEQTSRIIEHHAGMEKRNIGMVAKPTGMLSGLMSRLRGDSAPSQGATLKKLSSTGSSMSLGIISDADTDFYGTGEIEGDAETAPNGACGCRPGRNCCCVRCFRWIDASYERKVLFVMLATVTLGIFFYYVSAVVRILPMQNSGLTSDLVSLSSLCEQKLPFYLVGSLNNPSTVDARFDDAIAKIMRSDGVELGTTSVKGQRLKAGNHSFAFGGKFDITNEPALKETIQWWLHGQRITVKITADITVRTSVFLFPLALKTPVSAEFSLKGLFSNEPDNDPTGVPKVPDPNERSSEFRSVALLPANETLELRAAATAWLSNTTSFAVTVPTLFIEVEYNGTYVAYGYAGGFSYDRRGADIYAEGSIESNGTAGAQMLIQDFWDGKNITAVVRGSYRNGTANDMCFARRVLAGLSLNYTFEAWTGGKPAMQMWRRALAGAGLDSAPAPATSAHPADSDGHVDSRNAPGQAADVLAESAASDGDDVIHTNTRAHGDHVRGVRVAAEEKPFFALEGFELLSIYNNSFAAVTNVSADGVTDFYNFHGPIPRLGIEAVIGTESVAIVHTEPLLVLMQQPKLSLNLSLVIANASVALAKVRRYIDGRHLRLKLRGVKGINIATDILAGIELGISLNPPANWTAATSPSPSVVVENAPAWLTFGVGSGSGSGSRRISERAAADDDPSKRYNVSVAVTSDRDAMAAKLNVEIPRDFLGFRLVLHPFALSLETGGFNYGNLTFSGLTDQSAVTWVTVRITDDREGERIRGVLTRYNDEEDMLLTCRGTYGDGASFLEFNAPRTSIGSGEDEAGDSPITGIDDTGAISAGSWLSLRYLEMIGAEWYTVFLSIRATLESRFGVDVSLPALVLDIHADNVPIATIDVRPIAFGRDDVDFPVSIDLTIVNGTKIVRAGIDYMDDGSVLVKVRGNPNGSFLSRMLAGYDISVRLGGGSDAVATGTGGVNATEAASAAGVTDYSTVNLTVVSDPVSADGTFEMQLRDRAMDITLVWGAINITMSESALVQPFSRILVDGGSVGSNLAPSRFFVRVGAFARDNGTLIRTLLTRYLDGSNVGFLMNGTVASTRVPGKMHPIGSSISFDKSLFDRSAKAKADIAAGKADDSSTGGFGLSSVRLLSMEDRTVAVVANISLPATIGFNVILPTLSVVADCGQKRVRTLGLVMPNVDLRSQQDLLPLGMGITVASWELLWNVTDEIMRGPAPVPVLIYGNANGNLLSKMIPRILADISKGTGTKSRVVSRASTAFVTKENRTEVDIYASSTAISTDFGIEARFDLGFGDVFKLAWNDMVLSAAHPTGGNLGSASILGALVGGVNSKLRVNASMTGNYTKNIIAAVMQKDDFYVNLTGLIAPAGVIRADNILVPVSMMLGKRPPPPSSRRRRGTRFTQWPVDADEQTADPWTDVLDFRTPELWDDLRVVRGLPPLDDGEFDHGNNGNGNGSGDRRGDGSGDGEARAAHSRGRRDDSDTVLSSFELLRMSIIGADTVGSDVVLPCFLPEYCEMLAFNATATSVRGRFRVSTPNTNGIRIRLGSSVGIEVEANGLVLGTATLVAPVLVDRDSVVADFDVSFAFKSIDDLRATVSAVNDGSDMTVHVRGDPKVNFLSYAFSDTGKDIFVRGTTNSTASSTLPPMQLRLSNTGTKFMEVSITFSIRSPLTSANIFLGDISATGKYGHFEKVAGGGADPSRGVMFASVRNLTLVPGVNNITALLRLEYTDAYSQTMMEGLLSKYIWELQLPLEFNVTVRPQTTGVPFSIRTPFTFPEKISSSSFVQSFSVNPGSSLWSSLTSGKIAVSAVKASWLILDVTVKNSLQWPMRVLYMKYDMNLVDTDGVRDSGCTTSGPCSLSSSLCADPAPNKFFVTTISKGVTTGWASVIDGKESLATAETGTIQLTFDVNGAVAASRVYDEYAVKGSICADVRNGVIIIGMVADSCATPVTCGFRASIVFDWYDYGLAGTDTCGLYADTKCPFATAAPSLRYAPGSSFTFSAVAPNSAAKGSGTGGLFFPLSITAGSSQTGSVWFRQPLPVYDSFTANFTYRFFNKGSFGWGEGLAFVVQTSTQGYAALGKAGGSTTSGYAYDSIARSMAIAIDSYACNEMNVYANGDVSAAVYTTYSVAGAEITSGSSNTNTLTITYDAPGKRLSIEQNGRKATTDFDMAKRVPLFANGTAIVGFTGATGTLYSQGIEVSSFSFNPVATGGRRTTFSGIASSPLQFQQAWFLFQARDSCGRTRLLGGDQWVVMLESTAAATVSIAATARSSLNQVRDLGNGRYNVTFVSPARGRYNVRAILVSGQACTSEAAAKAIPECQTVLGGLFVRSDTA* # PASA_UPDATE: g6563.t1, single gene model update, valid-1, status:[pasa:asmbl_1095,status:3], valid-1 NODE_128_length_37030_cov_39.6932 . gene 26006 27899 . + . ID=g6563;Name=g6563.t1 NODE_128_length_37030_cov_39.6932 . mRNA 26006 27899 . + . ID=g6563.t1;Parent=g6563;Name=g6563.t1 NODE_128_length_37030_cov_39.6932 . five_prime_UTR 26006 26118 . + . ID=g6563.t1.utr5p1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 26006 26409 . + . ID=g6563.t1.exon1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 26119 26409 . + 0 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 26496 26547 . + . ID=g6563.t1.exon2;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 26496 26547 . + 0 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 26825 26902 . + . ID=g6563.t1.exon3;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 26825 26902 . + 2 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 27004 27149 . + . ID=g6563.t1.exon4;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 27004 27149 . + 2 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 27279 27434 . + . ID=g6563.t1.exon5;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 27279 27434 . + 0 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 27545 27618 . + . ID=g6563.t1.exon6;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 27545 27618 . + 0 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . exon 27734 27899 . + . ID=g6563.t1.exon7;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . CDS 27734 27839 . + 1 ID=cds.g6563.t1;Parent=g6563.t1 NODE_128_length_37030_cov_39.6932 . three_prime_UTR 27840 27899 . + . ID=g6563.t1.utr3p1;Parent=g6563.t1 #PROT g6563.t1 g6563 MAVRRLLAAADALLDPLFACAERMEGVVNAFGPLLVSLVAFLVVGVFVFFVSVVLPFAFRDAPHAHTPAFWFSCWVMANITFNYAMATLSSPGIVPRGDFRNGSANIPVTECRHCKSPRPLRAHHCKACRRCILKMDHHCPWINNCVGHFNHRYFMLFLIYLWGGCVYVAYNVYDLFWLCMSPHSSACRRATDSEILVLASFALVVSVILGVGVLLGSQVLLVSRGQTSIEDLDMPTAHSQYGVVRPYDAGLVANWRAFFGVRKRWHAIFILLPWPRDPTGDGYRWRSFQSATSALAFDV* # PASA_UPDATE: g6564.t1, single gene model update, valid-1, status:[pasa:asmbl_1097,status:12], valid-1 NODE_128_length_37030_cov_39.6932 . gene 28244 29830 . + . ID=g6564;Name=g6564.t1 NODE_128_length_37030_cov_39.6932 . mRNA 28244 29830 . + . ID=g6564.t1;Parent=g6564;Name=g6564.t1 NODE_128_length_37030_cov_39.6932 . five_prime_UTR 28244 28293 . + . ID=g6564.t1.utr5p1;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . exon 28244 28345 . + . ID=g6564.t1.exon1;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . CDS 28294 28345 . + 0 ID=cds.g6564.t1;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . exon 28547 28747 . + . ID=g6564.t1.exon2;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . CDS 28547 28747 . + 2 ID=cds.g6564.t1;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . exon 28943 29830 . + . ID=g6564.t1.exon3;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . CDS 28943 29628 . + 2 ID=cds.g6564.t1;Parent=g6564.t1 NODE_128_length_37030_cov_39.6932 . three_prime_UTR 29629 29830 . + . ID=g6564.t1.utr3p1;Parent=g6564.t1 #PROT g6564.t1 g6564 MGHDDEANGQASKKRKMEHEAGDVRRLPYTHEEIETIANFILSKTKYRPTIGIVCGSGLGGLADEITEQECLDYAAIPNFPVSTVAGHAGRFVFGLLAGQPAVAMQGRFHFYEGYPLWKVTMPVRAMHLLGVRTLIVTNAAGGLNHSWHVGDIMAIEDHISLPGMAGNNPLVGPNEERFGLRFPPTSQAYPKALRQIAADVAASLGISQYMRSGVYVCVSGPSFETPAEARFLRMAGADAVGMSTAPEVVVAVHCGMRVLGLSLITNLVVQDPASTEIASHGEVLETGRMRALDMQRLVAGIVARIAPSSSS* # ORIGINAL: g6561.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 10509 10853 . + . ID=g6561;Name=g6561.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 10509 10853 . + . ID=g6561.t1;Parent=g6561;Name=g6561.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 10509 10853 . + . ID=g6561.t1.exon1;Parent=g6561.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 10509 10853 . + 0 ID=cds.g6561.t1;Parent=g6561.t1 #PROT g6561.t1 g6561 MIRRGRETQRGWRNRAGGGRGAWAGASPTAPQWDARPTQSADRACFSRDLVTPHASSVAAQGGGRAKAGKVRVFATQRHVLEEECAGEGDNAAHVGSRLEGKHSRGSSERKRGA* # ORIGINAL: g6558.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 3828 4706 . - . ID=g6558;Name=g6558.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 3828 4706 . - . ID=g6558.t1;Parent=g6558;Name=g6558.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 3828 4706 . - . ID=g6558.t1.exon1;Parent=g6558.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 3828 4706 . - 0 ID=cds.g6558.t1;Parent=g6558.t1 #PROT g6558.t1 g6558 MEGIMSSNQSPGQVVCMAPSFQIFVVVSGDCSDHSPPMHVVGGCSSPGSQHDSPAHTSQTVTVTARNDTLVGHVVRLVGDRCGVRCRLSYAGRPLREHVTLGDYGIHRESTVFATPVVEECLPSPFVLSAALHPTPLTAPCVLHYAPPHNNSNNNARKRALSVENIHSHSASCIHYGSASTGAGCCGYGTTAASAAYGAHMRDASHVAKRARSGACDPAWEWEWESLAGRYHLNVASCGGHSAGVLCGGSGAPSASMSPAFSPVRAPQSCASLECLSMAIDDPSHGEEMCVV* # ORIGINAL: g6559.t1 original gene structure, not modified by PASA NODE_128_length_37030_cov_39.6932 AUGUSTUS gene 5983 6894 . + . ID=g6559;Name=g6559.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS mRNA 5983 6894 . + . ID=g6559.t1;Parent=g6559;Name=g6559.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS exon 5983 6894 . + . ID=g6559.t1.exon1;Parent=g6559.t1 NODE_128_length_37030_cov_39.6932 AUGUSTUS CDS 5983 6894 . + 0 ID=cds.g6559.t1;Parent=g6559.t1 #PROT g6559.t1 g6559 MDTITIADGRAVVRQLLCRLFLLLLLCQMVAECTSAHTVYMIRHAEKPSDSSISTLSAAGTWRASCVAPFFSNSPFALTKLFAQRPKFTTTSNGERILGAMQRPYTTITPLSQRLSLPIDMSCERDDTACITTAIRAAVPQGNVLVCWEHSQLAVIATALGVTPPPSYPGSHFDLVWAWRPDAPAQMDTTYQPTDCGTYPPPGNESAWPATGDVPMPGTYSSTNGHNGASKGAIIGGVVGGILGCCLAAAGVVYGMGRWRSSRHRGGGKQLDGGACTQSDEDAQTIRMFVNPSQSNQSIDSER* # ORIGINAL: g2597.t1 original gene structure, not modified by PASA NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS gene 459 2696 . - . ID=g2597;Name=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS mRNA 459 2696 . - . ID=g2597.t1;Parent=g2597;Name=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 2609 2696 . - . ID=g2597.t1.exon1;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 2609 2696 . - 0 ID=cds.g2597.t1;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 2180 2466 . - . ID=g2597.t1.exon2;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 2180 2466 . - 2 ID=cds.g2597.t1;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 1832 1954 . - . ID=g2597.t1.exon3;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 1832 1954 . - 0 ID=cds.g2597.t1;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 459 1658 . - . ID=g2597.t1.exon4;Parent=g2597.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 459 1658 . - 0 ID=cds.g2597.t1;Parent=g2597.t1 #PROT g2597.t1 g2597 MGALTGAQKTTGPPPSVERVGSTMEINVNGGGVLFLEEAYDLDPKVNTEGRAIVAEIMSAAEDHREKVTIILAGYKDDIENKLFEFNMGMASRFDTFPFDDFGEDELSRIWKGICEKKKWECAEDITVAKLFGRILNGFGLLATDHGEITSAMDVTGEYLGQTKEEVEKAMEAARGGVLFIDEAYELGAKGYGEEAMTKLLSMLTEDDYVDGKTIVILAGYEKQMHQMLARNVGMKSRFTETLDFPDWAPEKCAKFVLKRLSVDAKPTPYILGDGSEEDIEAMTSALTETFHVLQSSERPGWANVRDVLRMLKEVGMAREVRVAKERSNGTVRKSAIQPHVVAADVREARDIFLQSRPIVQTATLDAHDGVANILPMQGAHAYNPAPPKMQVRGETRTEARPTLNTEQTMDAKNDADEKRNAEAEQNVWMRATSTEWFNMDVATEVTPINDALARMGITSEADIARLAQGDAALIDSLEEALVNAGMDGDEASHVVERYRRAWKASRDARIKAEEERRMRLVTLQKVRRPIVQCQVCGRTAYFWAPCWVAPREIGYEEDDVPIYL* # ORIGINAL: g2598.t1 original gene structure, not modified by PASA NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS gene 2743 3524 . - . ID=g2598;Name=g2598.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS mRNA 2743 3524 . - . ID=g2598.t1;Parent=g2598;Name=g2598.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 3383 3524 . - . ID=g2598.t1.exon1;Parent=g2598.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 3383 3524 . - 0 ID=cds.g2598.t1;Parent=g2598.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS exon 2743 3251 . - . ID=g2598.t1.exon2;Parent=g2598.t1 NODE_3145_length_4200_cov_42.6242_potentialcontaminant AUGUSTUS CDS 2743 3251 . - 2 ID=cds.g2598.t1;Parent=g2598.t1 #PROT g2598.t1 g2598 MSLGANKTGMPNDGPAINAVLERVRDGEFDIVSDNIFEKMEGSDGRGKGRLARKANNPRRAGALFAHFMSNHSDLANKWLTKDELDLVAVMPVKGTPPAPAAVDPAATGATSTPTDLLRVRWEAKVSHLSAEQRRPMEELLQMEGLRRVKECALRIYNDVLANEKLRRNGRAESAQKRHLTLCLREIQAREKQRSRAFSRIFTQQRGPVQVTTSCL* # PASA_UPDATE: g4826.t1, single gene model update, valid-1, status:[pasa:asmbl_9525,status:12], valid-1 NODE_818_length_17357_cov_38.6177 . gene 6261 8956 . + . ID=g4826;Name=g4826.t1 NODE_818_length_17357_cov_38.6177 . mRNA 6261 8956 . + . ID=g4826.t1;Parent=g4826;Name=g4826.t1 NODE_818_length_17357_cov_38.6177 . five_prime_UTR 6261 6288 . + . ID=g4826.t1.utr5p1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 6261 6397 . + . ID=g4826.t1.exon1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 6289 6397 . + 0 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 6536 6586 . + . ID=g4826.t1.exon2;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 6536 6586 . + 2 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 6718 6838 . + . ID=g4826.t1.exon3;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 6718 6838 . + 2 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 7170 7282 . + . ID=g4826.t1.exon4;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 7170 7282 . + 1 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 7524 7606 . + . ID=g4826.t1.exon5;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 7524 7606 . + 2 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 7862 7976 . + . ID=g4826.t1.exon6;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 7862 7976 . + 0 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 8167 8317 . + . ID=g4826.t1.exon7;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 8167 8317 . + 2 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . exon 8604 8956 . + . ID=g4826.t1.exon8;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . CDS 8604 8646 . + 1 ID=cds.g4826.t1;Parent=g4826.t1 NODE_818_length_17357_cov_38.6177 . three_prime_UTR 8647 8956 . + . ID=g4826.t1.utr3p1;Parent=g4826.t1 #PROT g4826.t1 g4826 MSKTLTKAIDEAIAKHQTDVDLTDKGIASLDGPKQITVLTNITRLNLSHNKLTALPANIHELAKLETLVLSFNLLESLPQNINQLSNLRTLLVGSNKLKELPRGFGSCPVLEILDVSNNMISTLPNNVDYLTSLRALYLSNNQLEELPPGIGKLTNLEVLSVRDNNLKFLPKEVGQLKCLKELFAQGNKLRVLPRELADLDLAEPKHILRVEGNLLIDELVAELKKGFDELFVYLRGDGYASRLSTFMANPPPLQEDKKKK* # PASA_UPDATE: g4825.t1, single gene model update, valid-1, status:[pasa:asmbl_9524,status:12], valid-1 NODE_818_length_17357_cov_38.6177 . gene 2552 5056 . + . ID=g4825;Name=g4825.t1 NODE_818_length_17357_cov_38.6177 . mRNA 2552 5056 . + . ID=g4825.t1;Parent=g4825;Name=g4825.t1 NODE_818_length_17357_cov_38.6177 . five_prime_UTR 2552 2577 . + . ID=g4825.t1.utr5p1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . exon 2552 2598 . + . ID=g4825.t1.exon1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . CDS 2578 2598 . + 0 ID=cds.g4825.t1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . exon 3083 3640 . + . ID=g4825.t1.exon2;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . CDS 3083 3640 . + 0 ID=cds.g4825.t1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . exon 3802 4370 . + . ID=g4825.t1.exon3;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . CDS 3802 4370 . + 0 ID=cds.g4825.t1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . exon 4502 5056 . + . ID=g4825.t1.exon4;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . CDS 4502 4586 . + 1 ID=cds.g4825.t1;Parent=g4825.t1 NODE_818_length_17357_cov_38.6177 . three_prime_UTR 4587 5056 . + . ID=g4825.t1.utr3p1;Parent=g4825.t1 #PROT g4825.t1 g4825 MERSRLPAPDASKALLNAVALQDHLSRAINLKDLSSLQRFGRHGLRAPAHQPRAPKLVVAATDSGLRRAANATQNAHHNKLPGTLLSNRPASPSSRDMNCRPPLPDISSVGGGVSSRDARRAVATLLSEVRPERVLDKKLPEMTLAQKRGLVHAPAPLLSESEWADVKMRSCERGDSTQPCVICKEEFGLEDQVLLNCTHVFHHACLKSFERYVKKKSCPLCRHENYQARIIREGARLHKLRCVVFIQAAWRGYIARREFKKIRLANPPKDPRLRQKFYRERLTALTDRLLRSCAAEAEGVNRFLGDVDHALARSRAIFGAFDSTSADRLNKCDWEHVEQRAQIRCDADCPICLMPLERTRRQCALLNCSHLFHAQCISAFERYGTGEVPVCPVCRSPYLKKEIPPIGIS* # ORIGINAL: g4828.t1 original gene structure, not modified by PASA NODE_818_length_17357_cov_38.6177 AUGUSTUS gene 12706 14509 . + . ID=g4828;Name=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS mRNA 12706 14509 . + . ID=g4828.t1;Parent=g4828;Name=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 12706 12823 . + . ID=g4828.t1.exon1;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 12706 12823 . + 0 ID=cds.g4828.t1;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 13045 13143 . + . ID=g4828.t1.exon2;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 13045 13143 . + 2 ID=cds.g4828.t1;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 13301 13461 . + . ID=g4828.t1.exon3;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 13301 13461 . + 2 ID=cds.g4828.t1;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 13676 14509 . + . ID=g4828.t1.exon4;Parent=g4828.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 13676 14509 . + 0 ID=cds.g4828.t1;Parent=g4828.t1 #PROT g4828.t1 g4828 MALVRVGSATVCAGDALLPRVVRVLGDAGLQPLSLSRLHEHLKSGSIRVHLNHKHRFRLKATENGELVVYIRELEKIVPPVALFKETGLEGLRAYRKDANLPTLSRDFFDMDSLQRRIEQISGCGLPEAGLLHRLDTSTRGWVLGATDQAALNRYTAMRDESRIKSHYKFHVQPAAEWLIALEKCQRSRGIVSVADALGDRLPFDPTMAQVRARALPLSEEGREEGGRAMLLVSIRCALRHAGDHMRVCNLGQSKLVRETNVRVDVGDVGKAVRALKSNQASPVGLEAQATICRGARHQIRAQLACVGLPLVGDALYNRTSPDAQNAHFSSHKMTDHSGNASARDSASAARGWPAAQNRNVALCDPAKFTLECVGHEVDGRVIILEQPFVPHVYEWVDSRDYL* # ORIGINAL: g4827.t1 original gene structure, not modified by PASA NODE_818_length_17357_cov_38.6177 AUGUSTUS gene 8806 12160 . - . ID=g4827;Name=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS mRNA 8806 12160 . - . ID=g4827.t1;Parent=g4827;Name=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 12100 12160 . - . ID=g4827.t1.exon1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 12100 12160 . - 0 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 11712 11824 . - . ID=g4827.t1.exon2;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 11712 11824 . - 2 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 10846 10902 . - . ID=g4827.t1.exon3;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 10846 10902 . - 0 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 10597 10663 . - . ID=g4827.t1.exon4;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 10597 10663 . - 0 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 10173 10302 . - . ID=g4827.t1.exon5;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 10173 10302 . - 2 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 9630 9957 . - . ID=g4827.t1.exon6;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 9630 9957 . - 1 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 9318 9479 . - . ID=g4827.t1.exon7;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 9318 9479 . - 0 ID=cds.g4827.t1;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS exon 8806 8913 . - . ID=g4827.t1.exon8;Parent=g4827.t1 NODE_818_length_17357_cov_38.6177 AUGUSTUS CDS 8806 8913 . - 0 ID=cds.g4827.t1;Parent=g4827.t1 #PROT g4827.t1 g4827 MTAQSDEFVTSATDAIEIRLLSSASDLEDDELAFHPEFTHQLFGENEAIFGYKAPSVKLFYGAGSLLTHLSLDYKKKISATDDAQPDDVIKIIGEKIPQGFTSNVDVFLSKLAAEEAKFKPIGNLVHSYTDPEDKNTTFNVYKSNADTPRLRDYHARLQLFAMWLIETANFIDLEDPQWRVYLIFRHTRDPSNSKNDRHVVLGFSTVYEYFSFPDLVRLRVSQHVILPPYQGAGHGTELLRAIMLDARRSSEVFDVTVEEPNEAFTRMRDALDAAELMRVPEFTPPPPTWDDRLAKIARERLKITKADRIEDPAERIATLDQMYKDEEQAYRAVIDRLKAM* # PASA_UPDATE: g4824.t1, single gene model update, valid-1, status:[pasa:asmbl_9526,status:12], valid-1 NODE_818_length_17357_cov_38.6177 . gene 234 2111 . - . ID=g4824;Name=g4824.t1 NODE_818_length_17357_cov_38.6177 . mRNA 234 2111 . - . ID=g4824.t1;Parent=g4824;Name=g4824.t1 NODE_818_length_17357_cov_38.6177 . five_prime_UTR 1663 2111 . - . ID=g4824.t1.utr5p1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . exon 1384 2111 . - . ID=g4824.t1.exon1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . CDS 1384 1662 . - 0 ID=cds.g4824.t1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . exon 1062 1141 . - . ID=g4824.t1.exon2;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . CDS 1062 1141 . - 0 ID=cds.g4824.t1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . exon 863 937 . - . ID=g4824.t1.exon3;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . CDS 863 937 . - 1 ID=cds.g4824.t1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . exon 608 650 . - . ID=g4824.t1.exon4;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . CDS 608 650 . - 1 ID=cds.g4824.t1;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . exon 234 404 . - . ID=g4824.t1.exon5;Parent=g4824.t1 NODE_818_length_17357_cov_38.6177 . CDS 234 404 . - 0 ID=cds.g4824.t1;Parent=g4824.t1 #PROT g4824.t1 g4824 MATAVEMTTTHVAASPSPIDASASTDMGADNSIGSPSSDAVAQDSLPIPKDPMRPRENSAKIGHRKVVDGKVIYKKTASEDLMQAIQLGLRQSVGSITPKERRDLLMQDFAEIEIVDFPSAGSSFTPVHRMNDFSFKCYAPRAFRHFREAYDIKAEDFLLSLCNEALRELSNPGASGSLFYISYDDAFIIKTVQKREAEFLRKLLPQYYMVGSSS* # ORIGINAL: g3234.t1 original gene structure, not modified by PASA NODE_5595_length_786_cov_29.7581 AUGUSTUS gene 1 637 . - . ID=g3234;Name=g3234.t1 NODE_5595_length_786_cov_29.7581 AUGUSTUS mRNA 1 637 . - . ID=g3234.t1;Parent=g3234;Name=g3234.t1 NODE_5595_length_786_cov_29.7581 AUGUSTUS exon 442 637 . - . ID=g3234.t1.exon1;Parent=g3234.t1 NODE_5595_length_786_cov_29.7581 AUGUSTUS CDS 442 637 . - 0 ID=cds.g3234.t1;Parent=g3234.t1 NODE_5595_length_786_cov_29.7581 AUGUSTUS exon 1 164 . - . ID=g3234.t1.exon2;Parent=g3234.t1 NODE_5595_length_786_cov_29.7581 AUGUSTUS CDS 1 164 . - 2 ID=cds.g3234.t1;Parent=g3234.t1 #PROT g3234.t1 g3234 MAGVVAGLVTTSYRVGVLGGTPFPPLLRFVNGFLLGVQYSCPQCLVFREYVNSFADASLGEEAAERLIQKGVDVIFAAGGAMGSGGILYASLKGIYVIGVDSNEAESTFAGKPEVQRSKI # PASA_UPDATE: g8375.t1, single gene model update, valid-1, status:[pasa:asmbl_10021,status:12], valid-1 NODE_928_length_15795_cov_42.0159 . gene 51 1795 . + . ID=g8375;Name=g8375.t1 NODE_928_length_15795_cov_42.0159 . mRNA 51 1795 . + . ID=g8375.t1;Parent=g8375;Name=g8375.t1 NODE_928_length_15795_cov_42.0159 . exon 51 139 . + . ID=g8375.t1.exon1;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . CDS 51 139 . + 0 ID=cds.g8375.t1;Parent=g8375.t1;5_prime_partial=true NODE_928_length_15795_cov_42.0159 . exon 285 388 . + . ID=g8375.t1.exon2;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . CDS 285 388 . + 1 ID=cds.g8375.t1;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . exon 593 732 . + . ID=g8375.t1.exon3;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . CDS 593 732 . + 2 ID=cds.g8375.t1;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . exon 1034 1233 . + . ID=g8375.t1.exon4;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . CDS 1034 1233 . + 0 ID=cds.g8375.t1;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . exon 1528 1795 . + . ID=g8375.t1.exon5;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . CDS 1528 1660 . + 1 ID=cds.g8375.t1;Parent=g8375.t1 NODE_928_length_15795_cov_42.0159 . three_prime_UTR 1661 1795 . + . ID=g8375.t1.utr3p1;Parent=g8375.t1 #PROT g8375.t1 g8375 VLENHHCASAFHLLKTNDSLNIFSNFSKQHFKEIRETIVNLVLATDMAHHFEYVGKFKNKLSGNGFDFNERKDRALVLEIAIKCADVSNPAKPHKMCTRWSELIMEEFFKQGDEELARGMSVSMFMNRHDTNVPKCQVGFIDFIVGPLFEAWGSYLHGHRDKSVMCSHIDSNRSYWQGILDEADGRTSVATRSTSKGSDELAKSNSRIDAASGSQHMGSRG* # ORIGINAL: g8376.t1 original gene structure, not modified by PASA NODE_928_length_15795_cov_42.0159 AUGUSTUS gene 1906 3226 . - . ID=g8376;Name=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS mRNA 1906 3226 . - . ID=g8376.t1;Parent=g8376;Name=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS exon 3154 3226 . - . ID=g8376.t1.exon1;Parent=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS CDS 3154 3226 . - 0 ID=cds.g8376.t1;Parent=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS exon 2463 2968 . - . ID=g8376.t1.exon2;Parent=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS CDS 2463 2968 . - 2 ID=cds.g8376.t1;Parent=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS exon 1906 2367 . - . ID=g8376.t1.exon3;Parent=g8376.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS CDS 1906 2367 . - 0 ID=cds.g8376.t1;Parent=g8376.t1 #PROT g8376.t1 g8376 MRMSLFIIADDSSDDGDRDKTKSRDSGRPHISDADFFKRNAEFSVWLKESRGVVFGELDGDKARSHFSKFVRRWNSGRLSDKYYGGIEGRLDASVRTGHKWSFASKLNTAEMDAVRDAVDGATYRSSKGAAGSAGAPQKASGDRAVTRGYAADVGPAPPRHSSASMAPALPPGMRDKKAERKADKEYSDYKEMFGVLCFSLSPSYVLLSPWAAPKAQTESYVSPKHCACFVHVTAPWPLLSTQVLEELVPKPTGREVVVERRAMRRVAKRDGELSPELHDSVVLGTDELDKDNIARDRALAREATQRARRQAEGRTKLEEHRVRENAKMDELRQLASMRQWTTHQK* # PASA_UPDATE: g8377.t1, single gene model update, valid-1, status:[pasa:asmbl_10018,status:12],[pasa:asmbl_10019,status:12], valid-1 NODE_928_length_15795_cov_42.0159 . gene 3764 7085 . - . ID=g8377;Name=g8377.t1 NODE_928_length_15795_cov_42.0159 . mRNA 3764 7085 . - . ID=g8377.t1;Parent=g8377;Name=g8377.t1 NODE_928_length_15795_cov_42.0159 . five_prime_UTR 6921 7085 . - . ID=g8377.t1.utr5p1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 6779 7085 . - . ID=g8377.t1.exon1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 6779 6920 . - 0 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 6390 6611 . - . ID=g8377.t1.exon2;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 6390 6611 . - 2 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 5981 6180 . - . ID=g8377.t1.exon3;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 5981 6180 . - 2 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 5632 5743 . - . ID=g8377.t1.exon4;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 5632 5743 . - 0 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 5269 5420 . - . ID=g8377.t1.exon5;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 5269 5420 . - 2 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 4983 5080 . - . ID=g8377.t1.exon6;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 4983 5080 . - 0 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 4454 4842 . - . ID=g8377.t1.exon7;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 4454 4842 . - 1 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 4166 4371 . - . ID=g8377.t1.exon8;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 4166 4371 . - 2 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . exon 3764 3927 . - . ID=g8377.t1.exon9;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . CDS 3841 3927 . - 0 ID=cds.g8377.t1;Parent=g8377.t1 NODE_928_length_15795_cov_42.0159 . three_prime_UTR 3764 3840 . - . ID=g8377.t1.utr3p1;Parent=g8377.t1 #PROT g8377.t1 g8377 MDARMRTASINDRLNIAKNSIKGDYLGKAVVKATNAKMCAPKRKHVITVTESTRDGYASMPDLVKMLTSRLETGSWVVVFKALVVIHGALRDGNLRFTDFLASRTTNFNFLYNFHDRSDPQSLEMSGYVRRYARYMEERVYSYKALKVDICRTDRSAQGVHFRQLGDAQLVEEINVLQNMVAALVDVQFDPQTLLNEMIVSAFLPLLKDLTKIFVALNEAIISMLERFFEMKKEDARESVNIYKKFVQMTNAVIQFFDTARKTSFEEKTEVPEIKHAPITLLSALEDHVKAMDASKLDRRHSIIMDPALARLGGPADDTRRGSLNRRVSVSAQVGLPPTVTLAGMAGGGANGSAGWVPPSQPRPQPQPHSQPQLQQQQQQQQLQQQQQLQQQQHQQQQQQQQLQRQHQAQTNGRAKSTVDDLLSLENETNLTRAAEKLSLDAFDPFKEASQKVRFAPAAAPIPAAAMGMGHVGVQAIQPQQQQQAVPYGGANPFAQPSYSWGPAAPPATNINPFLENASTAPANPFESRSSNPFL* # PASA_UPDATE: g8380.t1, single gene model update, valid-1, status:[pasa:asmbl_10020,status:3], valid-1 NODE_928_length_15795_cov_42.0159 . gene 11713 14107 . - . ID=g8380;Name=g8380.t1 NODE_928_length_15795_cov_42.0159 . mRNA 11713 14107 . - . ID=g8380.t1;Parent=g8380;Name=g8380.t1 NODE_928_length_15795_cov_42.0159 . five_prime_UTR 13997 14107 . - . ID=g8380.t1.utr5p1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 13937 14107 . - . ID=g8380.t1.exon1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 13937 13996 . - 0 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 13666 13773 . - . ID=g8380.t1.exon2;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 13666 13773 . - 0 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 13417 13579 . - . ID=g8380.t1.exon3;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 13417 13579 . - 0 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 13163 13265 . - . ID=g8380.t1.exon4;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 13163 13265 . - 2 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 12912 13009 . - . ID=g8380.t1.exon5;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 12912 13009 . - 1 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 12724 12782 . - . ID=g8380.t1.exon6;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 12724 12782 . - 2 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 12398 12485 . - . ID=g8380.t1.exon7;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 12398 12485 . - 0 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 12111 12217 . - . ID=g8380.t1.exon8;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 12111 12217 . - 2 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . exon 11713 12003 . - . ID=g8380.t1.exon9;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . CDS 11761 12003 . - 0 ID=cds.g8380.t1;Parent=g8380.t1 NODE_928_length_15795_cov_42.0159 . three_prime_UTR 11713 11760 . - . ID=g8380.t1.utr3p1;Parent=g8380.t1 #PROT g8380.t1 g8380 MSFAQYSGVVAEGDTVVLYQSRDSLLSLSAQHGKVQHHRLGSFRHDDIIGKEYGSKVWSDKKDRWMLVLHPTPELWTGVLPHRTQILYVADISAITLHLDLKPGAIVCESGTGSGSLTHSLARTVMPTGHVHTFEFHEQRAAQAREEFKAHGLERFVTVTCTDVCLNGFGMTDQADAVFLDLPSPWEAAHWARKALKSTGARLCSFSPCIEQVSRMCDALRTEGFTDIRTFECILRPFNVKRLNFDKLPTADDTDTATAASKGRKRPREDEAPANATEADMQGHGAAASTAPHAPHTPAHTAPAMSARPYPEMRGHTGYLTFATLEAGAGAGLAANADAAAD* # ORIGINAL: g8378.t1 original gene structure, not modified by PASA NODE_928_length_15795_cov_42.0159 AUGUSTUS gene 7340 9389 . - . ID=g8378;Name=g8378.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS mRNA 7340 9389 . - . ID=g8378.t1;Parent=g8378;Name=g8378.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS exon 7902 9389 . - . ID=g8378.t1.exon1;Parent=g8378.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS CDS 7902 9389 . - 0 ID=cds.g8378.t1;Parent=g8378.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS exon 7340 7645 . - . ID=g8378.t1.exon2;Parent=g8378.t1 NODE_928_length_15795_cov_42.0159 AUGUSTUS CDS 7340 7645 . - 0 ID=cds.g8378.t1;Parent=g8378.t1 #PROT g8378.t1 g8378 MDSVPLWESLIDAAKEGDVVALRALCDKGADVNCVDMNGWYPVHYSAEKGDLECLIELVNRGANVNVRDNTGSTPLHRAAVGNRVKCVEVLLRSKNADITIRNQQDYRPYDVAMMLGHSEISAMLSNYGATTGSPSKNEKPPRKLFGKVMPGKKKGGADTFGMLMGAVRQGDHHMIVTLLNSGEDVNSRDADHDNCTPLHVAAEHGHVPCVALLLERGADAQAVNDIGWTALHALAAGTTSAHAECAAMLVQMGADIFARSANGETPRELAIRCRGLTDLVSLLDDAEVSAARDVLRQRMSAPVEQQGIVVRGNATATAREERLRMAIAAVLRRLSASAGLSPMPSGGSVGGNSGGGSALTLAPQGQGSGSGVGGVACVKCGASTSLSGSSSVASLDAPMRGMTALSLGPAGAQLSVVQTPNVFAVGVDNERLKALEEERDALNARCRKLMQSIAAAAQEHEDALAALEAKMAAAEEEKHAAIRRMGEERDATVKRIKRELEEADLEKADLLRIQSNKKLTWVPDDYAAECAEPTCHAKFTQNRRRHHCRCCGRVFCKPCVVQKAILTKLGYDKPVRVCVHCHALVKTHEDVLDTKK* # PASA_UPDATE: g8379.t1, single gene model update, valid-1, status:[pasa:asmbl_10022,status:3], valid-1 NODE_928_length_15795_cov_42.0159 . gene 9761 11675 . + . ID=g8379;Name=g8379.t1 NODE_928_length_15795_cov_42.0159 . mRNA 9761 11675 . + . ID=g8379.t1;Parent=g8379;Name=g8379.t1 NODE_928_length_15795_cov_42.0159 . five_prime_UTR 9761 9825 . + . ID=g8379.t1.utr5p1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 9761 10023 . + . ID=g8379.t1.exon1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 9826 10023 . + 0 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 10219 10361 . + . ID=g8379.t1.exon2;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 10219 10361 . + 0 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 10455 10571 . + . ID=g8379.t1.exon3;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 10455 10571 . + 1 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 10744 10845 . + . ID=g8379.t1.exon4;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 10744 10845 . + 1 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 11038 11152 . + . ID=g8379.t1.exon5;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 11038 11152 . + 1 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 11283 11390 . + . ID=g8379.t1.exon6;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 11283 11390 . + 0 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . exon 11495 11675 . + . ID=g8379.t1.exon7;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . CDS 11495 11647 . + 0 ID=cds.g8379.t1;Parent=g8379.t1 NODE_928_length_15795_cov_42.0159 . three_prime_UTR 11648 11675 . + . ID=g8379.t1.utr3p1;Parent=g8379.t1 #PROT g8379.t1 g8379 MSEGSTEGSPAPSKRGWLQTLAINVLRAGRIPRHVAFIMDGNRRYAQKVHVDKARGHALGFDKLEETLELCLDLGVQIVTVYAFSIENFKRSKDEVDALMMLAKDKFVKLAEHSDVIARHGVSIRVLGDVAMLPLDVQEAVARAVTMSKCNNRAVLNVCFPYTSRHEITLAARDIAKGVAAGAIECSDVDGALLSRCLYTADSPDPDLLVRTSGESRLSDFLLWQTTYSCVDFLDVLWPEFSLRHLFLSVLHYQRAAASIEAYRAKLSAPSVHDMATSDPPSDGRVDEFLQCLHSDRLAFFEKVAPPQPAR* # PASA_UPDATE: g11687.t1, single gene model update, valid-1, status:[pasa:asmbl_3254,status:12], valid-1 NODE_2003_length_8139_cov_37.8268 . gene 299 5959 . - . ID=g11687;Name=g11687.t1 NODE_2003_length_8139_cov_37.8268 . mRNA 299 5959 . - . ID=g11687.t1;Parent=g11687;Name=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 5789 5959 . - . ID=g11687.t1.exon1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 5789 5959 . - 0 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 5208 5383 . - . ID=g11687.t1.exon2;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 5208 5383 . - 0 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 4477 4714 . - . ID=g11687.t1.exon3;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 4477 4714 . - 1 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 2944 4175 . - . ID=g11687.t1.exon4;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 2944 4175 . - 0 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 2291 2546 . - . ID=g11687.t1.exon5;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 2291 2546 . - 1 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 1968 2087 . - . ID=g11687.t1.exon6;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 1968 2087 . - 0 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 1571 1659 . - . ID=g11687.t1.exon7;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 1571 1659 . - 0 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 1226 1413 . - . ID=g11687.t1.exon8;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 1226 1413 . - 1 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 927 1059 . - . ID=g11687.t1.exon9;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 927 1059 . - 2 ID=cds.g11687.t1;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . exon 299 530 . - . ID=g11687.t1.exon10;Parent=g11687.t1 NODE_2003_length_8139_cov_37.8268 . CDS 299 530 . - 1 ID=cds.g11687.t1;Parent=g11687.t1;3_prime_partial=true #PROT g11687.t1 g11687 MASSVCHGMLRVISGRGGVRVVVRATLTCLVAACVLAAAAEAMSHWVRTKHGIITRADPPDAVVAASKTLPEYFGRMQLIPTYMSQLWPFRGECKAVDDAIDVTAYNFQTDWRNVDISALFSRTWTPPPELLDPAINPGCTVLGDASDHKFLRALGTNFVLRMSPGERNLFDDVPVFDRLAYPLITMADLLRIVAPPYDTTSLLDLSGLYSRVTGNLTGAFHCYRRSIYESTPDNAIHAYAGISSVLARASNVKETLDALTLAVDMAAHPAYVLMAMGVLHFREGNLLRADSLFVRAISLHPRVPAAYEWLKRTRCGQRLVAAHGLDESGYLPWYLDWLVAERTAMYAGSAGSGVTASSPNAAGVKNDDSNDGNVNAKGASRAPLPSVTASVTASVVSPSAVPVTTPATSSSARAKAPAENSAKAAVRKPSGKVNSDKEVSENSAEKGTPSNQKEKVSLKGKALSDEKKIRRASRHIPDVSPAPASAGTTTGGTLTASAATPATTASTATHAQSHITMETVSSSSSSSPSPSPSSSSPSSLSASPASLTTGAPSATSAHAAPTRTGVSDGVTELQSLQERCSKASPLPSVANFASCYLPPQIIAPNYDVAIDRGEAATLEGLNLSSRPMCVSPLPRNSFRVFAHLKSVVDRSILPNVPEVGLGSLLLSIGKSDVAVGDSSAPAALARLLRKHPTSFLVLNWATLYWRLVGNSSLAMECGLRALYYSPSGAQDSALLSIANIMHKSGHLRDAEVVLRTALITSDQTVVLFALGATLAAGGQLRVSAHYLTLAVKAQANFHIAKEALDAVTCKMALNPAADRGPSMDEHTALPFLRLDWPTRKECSDQRLINITRDKTAVFIPLEARGIKLHALIPHLEPDSPVVPAYPACNEQFEAPATLLAHTEGVAELRDYLFAFFMDAAEVRNPSSWALSEVGSGLAALRGLK # ORIGINAL: g13127.t1 original gene structure, not modified by PASA NODE_1134_length_13653_cov_38.3135 AUGUSTUS gene 238 6302 . + . ID=g13127;Name=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS mRNA 238 6302 . + . ID=g13127.t1;Parent=g13127;Name=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 238 307 . + . ID=g13127.t1.exon1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 238 307 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 543 616 . + . ID=g13127.t1.exon2;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 543 616 . + 2 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 790 935 . + . ID=g13127.t1.exon3;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 790 935 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 1169 1265 . + . ID=g13127.t1.exon4;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 1169 1265 . + 1 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 1504 1710 . + . ID=g13127.t1.exon5;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 1504 1710 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 2039 2218 . + . ID=g13127.t1.exon6;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 2039 2218 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 2442 2568 . + . ID=g13127.t1.exon7;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 2442 2568 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 2803 2973 . + . ID=g13127.t1.exon8;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 2803 2973 . + 2 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 3264 3348 . + . ID=g13127.t1.exon9;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 3264 3348 . + 2 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 3808 3954 . + . ID=g13127.t1.exon10;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 3808 3954 . + 1 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 4162 4265 . + . ID=g13127.t1.exon11;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 4162 4265 . + 1 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 4437 4539 . + . ID=g13127.t1.exon12;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 4437 4539 . + 2 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 4739 4799 . + . ID=g13127.t1.exon13;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 4739 4799 . + 1 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 5014 5129 . + . ID=g13127.t1.exon14;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 5014 5129 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 5474 5567 . + . ID=g13127.t1.exon15;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 5474 5567 . + 1 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 5826 5981 . + . ID=g13127.t1.exon16;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 5826 5981 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 6297 6302 . + . ID=g13127.t1.exon17;Parent=g13127.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 6297 6302 . + 0 ID=cds.g13127.t1;Parent=g13127.t1 #PROT g13127.t1 g13127 MSSPSSASRRSPRSRQSANEPSSDAPLPSSGVSATSTPSRRDPLATSQQTPSSRGRASAPATDPRTMSMADSERRLGSESSPLRYSQTPVKSQGGTPALTPARRSDINRTRRPQMFDPASMIHTSDDDRMQMPGSQDAPPSDRTASNAGANNNGNYARAVIWGTNVNVQETMDAFRRFLNDFRDEESGEFVYARLLEEIRATERYFLELDCMNLHAFDKSLYLRMVRYPQEIIPIFDMVAEEVYKTMFPNEPPLRPIQVRTYNLETTKNMRLLNPDDVDQLISIRGMVIRTSTVIPDLKEAFFRCSVCHETKAVEIDRGRIEEPSRCPSCDTLRSMQLVHNRCTFADKQMVKLQETPEMIPEGQTPHTALLLAYDDLVDYVQPGDRIEVTGIYRATPLRVNPRDRTLKSIYKIHIDVVHFKKTDKRRMARAEGDETSNNVEDRISPEREGELKALSRLPDIYDRLTRALAPSIWELADVKKGILCQLFGGTNKVMKEAGKGRLRGEVNILLCGDPGTSKSQLLQYVHKLAPRGIYTSGKGSSSVGLTAYVTKDPESRQLVLESGALVLSDGGICCIDEFDKMNDSTRSVLHEAMEQQTVSIAKAGIICTLNARTSILAAANPSQSRWNRNVSIVENIQLSPTILSRV* # ORIGINAL: g13130.t1 original gene structure, not modified by PASA NODE_1134_length_13653_cov_38.3135 AUGUSTUS gene 11501 13055 . - . ID=g13130;Name=g13130.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS mRNA 11501 13055 . - . ID=g13130.t1;Parent=g13130;Name=g13130.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 11973 13055 . - . ID=g13130.t1.exon1;Parent=g13130.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 11973 13055 . - 0 ID=cds.g13130.t1;Parent=g13130.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 11501 11839 . - . ID=g13130.t1.exon2;Parent=g13130.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 11501 11839 . - 0 ID=cds.g13130.t1;Parent=g13130.t1 #PROT g13130.t1 g13130 MPHKTHISILADLEDLLTKWQRDISVLDSPSKVTKCISTTSEGLLCGIQSLLREARDMRFDKNKPNWRLAFAKISKYYGDYRRIFHEQVHGDEEVVRRVMSQRFEVVSEVYFGRLMVLQESPADASFFGMIAAQCYNMLQDLEEAAITAGVAHYQLRALVAQGFYQIEETRRVRAAKRNVQSMNIQLQLYEVALLAEHDMWAVEALAGVYDAAEGNKANEDVRVAANRLASTALSIHDGLVGMGHVPVTRRLTRQIAQCWRNVGVFLMFAAEAMGEYRPINNADYAQSVGLIRSYTAMALRALRKASETMNSAPDTIPRDHYDICVNLAKALAFEGDATQALGHLEMLRAATPITESWSESLRLNLTRLEVLAWVRSPVNNTAFTGDGPLAAVDAAVTEVMRIVEIHRKEMDGVVHAHKNAHDALSAIILSVDKGARWSRLQADRPNIGLFLRNKQEKIREDWHKAATPRRDE* # ORIGINAL: g13128.t1 original gene structure, not modified by PASA NODE_1134_length_13653_cov_38.3135 AUGUSTUS gene 6319 8066 . + . ID=g13128;Name=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS mRNA 6319 8066 . + . ID=g13128.t1;Parent=g13128;Name=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 6319 6420 . + . ID=g13128.t1.exon1;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 6319 6420 . + 0 ID=cds.g13128.t1;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 6687 6786 . + . ID=g13128.t1.exon2;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 6687 6786 . + 0 ID=cds.g13128.t1;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 7194 7335 . + . ID=g13128.t1.exon3;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 7194 7335 . + 2 ID=cds.g13128.t1;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 7570 7777 . + . ID=g13128.t1.exon4;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 7570 7777 . + 1 ID=cds.g13128.t1;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 7962 8066 . + . ID=g13128.t1.exon5;Parent=g13128.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 7962 8066 . + 0 ID=cds.g13128.t1;Parent=g13128.t1 #PROT g13128.t1 g13128 MDQPNEQQDRRLAQHIVAMYQQSDRDRVRNAEDMNIETLTEYISYARKHIHPALTDDAMRTLIEGYGQMRKLGGNKRTITATPRQLESLIRLSEALARMRFSQTVEESDVQEAIRLVRVALQDSATDPRTGLIDMDLITTGVSAFSRSRIADLANELRAQLSKSAAPMMKLGEVYTEITRASSVDIPQEQFLAALKELEDVGFITVTGRGGDKMVRIL* # ORIGINAL: g13129.t1 original gene structure, not modified by PASA NODE_1134_length_13653_cov_38.3135 AUGUSTUS gene 8808 10911 . - . ID=g13129;Name=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS mRNA 8808 10911 . - . ID=g13129.t1;Parent=g13129;Name=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 10320 10911 . - . ID=g13129.t1.exon1;Parent=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 10320 10911 . - 0 ID=cds.g13129.t1;Parent=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 9481 10055 . - . ID=g13129.t1.exon2;Parent=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 9481 10055 . - 2 ID=cds.g13129.t1;Parent=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS exon 8808 9161 . - . ID=g13129.t1.exon3;Parent=g13129.t1 NODE_1134_length_13653_cov_38.3135 AUGUSTUS CDS 8808 9161 . - 0 ID=cds.g13129.t1;Parent=g13129.t1 #PROT g13129.t1 g13129 MAPNMSSGDSNLSASSDPVIRVAVIGSGMAGLSAAWLLSQNSNVEVHIYERFTTLGLGAHSVPVPLDRQKGTEVIVDIPARVFVTSYYTELIALYETVGVRFHTADASTAYQLIGESSSHFRYSNLLVGPYSIPYVPVRELFSLSYFRMLRDLFRFRRLAHEWFIAGKLRGITLGDFVEMHSFGPDFVQKFLVPMLTIICTCSFASILSYPAEDIIEFMLCLTLRGEGCRRATGGTTEVVALLSKNVTTKRCNSVIQSVWSDGDNSGDAQRGSVCVQTADGSIERFHHAVIATQANHAFSVLRDPLPEHARSIGSIRHEASQVVLHRDVRLMPHRRSDWSPCNVFVDVARGEGSCTAWQNRIQTENDVGAADLFQTWNPLVQPDPKLTIAQSSFERPIVTLETRPRLDLLASVQGRNNIWFCGAYSLPGIPLLENAVRSGLAVAEAIAPAKRPWQSGQRKHSGVLDTPAVLTPRDVVGSVVSHYASRALLGAGIACGCYLMAVRAR* # PASA_UPDATE: g13320.t1, single gene model update, valid-1, status:[pasa:asmbl_6890,status:12], valid-1 NODE_4038_length_2299_cov_41.9317 . gene 485 2273 . + . ID=g13320;Name=g13320.t1 NODE_4038_length_2299_cov_41.9317 . mRNA 485 2273 . + . ID=g13320.t1;Parent=g13320;Name=g13320.t1 NODE_4038_length_2299_cov_41.9317 . five_prime_UTR 485 860 . + . ID=g13320.t1.utr5p1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . exon 485 913 . + . ID=g13320.t1.exon1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . CDS 861 913 . + 0 ID=cds.g13320.t1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . exon 1280 1459 . + . ID=g13320.t1.exon2;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . CDS 1280 1459 . + 1 ID=cds.g13320.t1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . exon 1620 1742 . + . ID=g13320.t1.exon3;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . CDS 1620 1742 . + 1 ID=cds.g13320.t1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . exon 1879 1956 . + . ID=g13320.t1.exon4;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . CDS 1879 1956 . + 1 ID=cds.g13320.t1;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . exon 2067 2273 . + . ID=g13320.t1.exon5;Parent=g13320.t1 NODE_4038_length_2299_cov_41.9317 . CDS 2067 2273 . + 1 ID=cds.g13320.t1;Parent=g13320.t1;3_prime_partial=true #PROT g13320.t1 g13320 MDGRVPGLPANWQSMLGGPDFLDFTQPMMEDFGIPSLELEELAMPCYSASPSSEQSSFLASPHDGTAGGKDLKRGSVSNTQGNSRKRRRTVDETEASPCFVPCRVQEWRPILSDKMEQICTLELRAEISKGAQYSEVDNAWILYRKNHFQVAADLSQNTNEAGRSRVASVVAADGTVVPVRRLQLAVNGYKERNDSSNAAAGEEVELYQSPTN # PASA_UPDATE: g3784.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9715,status:12],[pasa:asmbl_9717,status:12],[pasa:asmbl_9719,status:13], valid-1 # PASA_UPDATE: g3784.t1, single gene model update, valid-1, status:[pasa:asmbl_9718,status:12],[pasa:asmbl_9716,status:12], valid-1 NODE_860_length_16606_cov_41.6994 . gene 5563 14580 . + . ID=g3784;Name=g3784.t1 NODE_860_length_16606_cov_41.6994 . mRNA 6196 14580 . + . ID=g3784.t1.1.5b6be70c;Parent=g3784;Name=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 6196 6259 . + . ID=g3784.t1.1.5b6be70c.exon1;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 6196 6259 . + 0 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 6732 6857 . + . ID=g3784.t1.1.5b6be70c.exon2;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 6732 6857 . + 2 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 7142 7458 . + . ID=g3784.t1.1.5b6be70c.exon3;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 7142 7458 . + 2 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 9462 9519 . + . ID=g3784.t1.1.5b6be70c.exon4;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 9462 9519 . + 0 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 9942 10858 . + . ID=g3784.t1.1.5b6be70c.exon5;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 9942 10858 . + 2 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 11191 11426 . + . ID=g3784.t1.1.5b6be70c.exon6;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 11191 11426 . + 0 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 11694 12711 . + . ID=g3784.t1.1.5b6be70c.exon7;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 11694 12711 . + 1 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . exon 12937 14580 . + . ID=g3784.t1.1.5b6be70c.exon8;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . CDS 12937 14148 . + 0 ID=cds.g3784.t1.1.5b6be70c;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . three_prime_UTR 14149 14580 . + . ID=g3784.t1.1.5b6be70c.utr3p1;Parent=g3784.t1.1.5b6be70c NODE_860_length_16606_cov_41.6994 . mRNA 5563 14580 . + . ID=g3784.t1;Parent=g3784;Name=g3784.t1 NODE_860_length_16606_cov_41.6994 . five_prime_UTR 5563 5664 . + . ID=g3784.t1.utr5p1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . five_prime_UTR 6065 6195 . + . ID=g3784.t1.utr5p2;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 5563 5664 . + . ID=g3784.t1.exon1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 6065 6259 . + . ID=g3784.t1.exon2;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 6196 6259 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 6732 6857 . + . ID=g3784.t1.exon3;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 6732 6857 . + 2 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 7142 7458 . + . ID=g3784.t1.exon4;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 7142 7458 . + 2 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 7734 7809 . + . ID=g3784.t1.exon5;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 7734 7809 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 8076 8368 . + . ID=g3784.t1.exon6;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 8076 8368 . + 2 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 8614 8689 . + . ID=g3784.t1.exon7;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 8614 8689 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 9050 9300 . + . ID=g3784.t1.exon8;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 9050 9300 . + 2 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 9462 9519 . + . ID=g3784.t1.exon9;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 9462 9519 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 9942 10858 . + . ID=g3784.t1.exon10;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 9942 10858 . + 2 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 11191 11426 . + . ID=g3784.t1.exon11;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 11191 11426 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 11694 12711 . + . ID=g3784.t1.exon12;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 11694 12711 . + 1 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . exon 12937 14580 . + . ID=g3784.t1.exon13;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . CDS 12937 14148 . + 0 ID=cds.g3784.t1;Parent=g3784.t1 NODE_860_length_16606_cov_41.6994 . three_prime_UTR 14149 14580 . + . ID=g3784.t1.utr3p1;Parent=g3784.t1 #PROT g3784.t1.1.5b6be70c g3784 MACLATPTSSKGTDDLPSSHLRTVTVRRQCTLWPSSRSCATSVRLFTLQTAFIVCLFLSFCRADVVPLPSDSSAASSVSSQTVAVSSLGQQGPINVTVGTPNRQFNPSNITFLVGSWVNWVNLTRPHEVVQIGAPGNCTALDGGFSSNGSSITYSRQFNTPGVYYYKCTPHCASYNMTGVVYVLPYSQVTASSRAATVTAMQQQQAASTTASPTAGTMAASSPVAPSTSPATPPTNSVPFTRPGVYEQTVRLMPSYRLDWTADSNTGILHVSLTFYGRSFGWMGLGFGSGMVNTDLVVCGVRPDGTAWARDSYTTDYYPDPDDTYGGRDDIIPGSIAGYSSGSMMTVQWSRPLRTGDSYDAELSALSPLVSLIFAAGSHVEPEYHGRDGKGTAKIDMFAGTVVSISAGSDTTNIYIVHGTVMLLTFGVLYPVGIICARFFKHKRNWLSIHAEFMLFGSMEVIQLVIVAAVGSTHHLDQKHAQIGIAIAVLIGVQIFLGLLSKRRLQQSSYTPGLVLARELHKVVGYACFLLGLVNPHYGFKLLFPEDTKAEKFYFAWLSILTTTFVGIELRGRYRRHKFFASSKVGVDRIGSDKNIARFTWQEVSQRVAEGSLWIVIRDNVYDVQSWLGSHPGGDKVILDYVGMDASKAFFGLKSRSSMSLASQDQSDGDSSENDTNNQGGPSSLEASFRSNGTGTTVKRRNSAMSTLVRRTKQAKDSMRKLRRTKSVSSNEIVHEHSAYAWETLDSMLVGRLAKEEEEALYAEDAEGSKIGSSLGFMRTMSRFASKMGLANLDENAEGKASHAQLPAVGADGGGGGGPPSQWAQTQKDKREAIKSKKQRKEASTMFHRYRLVSREVLTAVVRSDAPIVVRLQFVNVDGGGVGKTDPGEWMTVLATVAGRTIHRPYTIVREEDEELFGLIIKVYPTGAVSRFLNTLQAGDNVRMRGPLGHPLKNPAAADKCWRRLVMIAGGVGLTPFIDLIARQNSSHKQPWKGHLLFANSTSLDVFYDAELRKLAAESEGCFSFDHVIGDGTWHVGAEVPDNVAFGHIDEGLLGRILQDMMMPVTVSATDTPGTCAPMTDENREAANNADGVSIPNATCITGDGDANEAKRNAIGETEGSVTVMIEEGNGFFDGDARAVDGKDRSAPRGPQEVPSPPPPSSGGSPSAAVAVVSAPRTPVAKVTSKTQLLAVISRTGSMRPSTSVSSILAGGLSSTASFGPANTAGSEVALLPPLSLSRRPSEFSGSRRMSSLPPTMPEMRRMSAMLKAATSDRDDLANPDNARIMICGPPVFVRAMQQALLKLGIPSALIQMLG* #PROT g3784.t1 g3784 MACLATPTSSKGTDDLPSSHLRTVTVRRQCTLWPSSRSCATSVRLFTLQTAFIVCLFLSFCRADVVPLPSDSSAASSVSSQTVAVSSLGQQGPINVTVGTPNRQFNPSNITFLVGSWVNWVNLTRPHEVVQIGAPGNCTALDGGFSSNGSSITYSRQFNTPGVYYYKCTPHCASWNMTGVIYVLDNPPAPSASTESTPTPTSTPTATSVNVPGQGPMNVTVGTPSHQFNPSNITFLVGSWVNWVNLTRPHDVVQIGAPGNCTALDGGFSSNGSSITYSRQFNTPGVYYYKCTPHCASWNMTGVIYVLDNSPAPSARTVNVPGQGPINVTVGTPNRQFNPLNITFLVGSWVNWVNLTRPHDVVQIGAPGNCTGLDGGFSSNGSSITYSRQFNTPGVYYYKCTPHCASYNMTGVVYVLPYSQVTASSRAATVTAMQQQQAASTTASPTAGTMAASSPVAPSTSPATPPTNSVPFTRPGVYEQTVRLMPSYRLDWTADSNTGILHVSLTFYGRSFGWMGLGFGSGMVNTDLVVCGVRPDGTAWARDSYTTDYYPDPDDTYGGRDDIIPGSIAGYSSGSMMTVQWSRPLRTGDSYDAELSALSPLVSLIFAAGSHVEPEYHGRDGKGTAKIDMFAGTVVSISAGSDTTNIYIVHGTVMLLTFGVLYPVGIICARFFKHKRNWLSIHAEFMLFGSMEVIQLVIVAAVGSTHHLDQKHAQIGIAIAVLIGVQIFLGLLSKRRLQQSSYTPGLVLARELHKVVGYACFLLGLVNPHYGFKLLFPEDTKAEKFYFAWLSILTTTFVGIELRGRYRRHKFFASSKVGVDRIGSDKNIARFTWQEVSQRVAEGSLWIVIRDNVYDVQSWLGSHPGGDKVILDYVGMDASKAFFGLKSRSSMSLASQDQSDGDSSENDTNNQGGPSSLEASFRSNGTGTTVKRRNSAMSTLVRRTKQAKDSMRKLRRTKSVSSNEIVHEHSAYAWETLDSMLVGRLAKEEEEALYAEDAEGSKIGSSLGFMRTMSRFASKMGLANLDENAEGKASHAQLPAVGADGGGGGGPPSQWAQTQKDKREAIKSKKQRKEASTMFHRYRLVSREVLTAVVRSDAPIVVRLQFVNVDGGGVGKTDPGEWMTVLATVAGRTIHRPYTIVREEDEELFGLIIKVYPTGAVSRFLNTLQAGDNVRMRGPLGHPLKNPAAADKCWRRLVMIAGGVGLTPFIDLIARQNSSHKQPWKGHLLFANSTSLDVFYDAELRKLAAESEGCFSFDHVIGDGTWHVGAEVPDNVAFGHIDEGLLGRILQDMMMPVTVSATDTPGTCAPMTDENREAANNADGVSIPNATCITGDGDANEAKRNAIGETEGSVTVMIEEGNGFFDGDARAVDGKDRSAPRGPQEVPSPPPPSSGGSPSAAVAVVSAPRTPVAKVTSKTQLLAVISRTGSMRPSTSVSSILAGGLSSTASFGPANTAGSEVALLPPLSLSRRPSEFSGSRRMSSLPPTMPEMRRMSAMLKAATSDRDDLANPDNARIMICGPPVFVRAMQQALLKLGIPSALIQMLG* # PASA_UPDATE: g3783.t1, single gene model update, valid-1, status:[pasa:asmbl_9714,status:12], valid-1 NODE_860_length_16606_cov_41.6994 . gene 86 3358 . - . ID=g3783;Name=g3783.t1 NODE_860_length_16606_cov_41.6994 . mRNA 86 3358 . - . ID=g3783.t1;Parent=g3783;Name=g3783.t1 NODE_860_length_16606_cov_41.6994 . five_prime_UTR 3326 3358 . - . ID=g3783.t1.utr5p1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 3252 3358 . - . ID=g3783.t1.exon1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 3252 3325 . - 0 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 3078 3142 . - . ID=g3783.t1.exon2;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 3078 3142 . - 1 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 2745 2857 . - . ID=g3783.t1.exon3;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 2745 2857 . - 2 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 2420 2488 . - . ID=g3783.t1.exon4;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 2420 2488 . - 0 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 2102 2242 . - . ID=g3783.t1.exon5;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 2102 2242 . - 0 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 1885 1916 . - . ID=g3783.t1.exon6;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 1885 1916 . - 0 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 1609 1703 . - . ID=g3783.t1.exon7;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 1609 1703 . - 1 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 1088 1309 . - . ID=g3783.t1.exon8;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 1088 1309 . - 2 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 747 930 . - . ID=g3783.t1.exon9;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 747 930 . - 2 ID=cds.g3783.t1;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . exon 86 473 . - . ID=g3783.t1.exon10;Parent=g3783.t1 NODE_860_length_16606_cov_41.6994 . CDS 86 473 . - 1 ID=cds.g3783.t1;Parent=g3783.t1;3_prime_partial=true #PROT g3783.t1 g3783 MEKYMTGTPVATSMRPCDLSTCTKEEIRAYFENTYDLDETLFSSIQDERALYVCPDRLRLPLVFYLAHPATLYANKLLLAGLITERVDAHFEALFETGVDEMSWDDTENYRMGGNFKWPAVADVWEYRRRVRKLVIDVIERTPLTLPVTMESPWWAIFMGAEHERIHIETSSVLIRQLPVSMVKRPSAWAYAPVQAVEGRPTNAFVECHGAVVCLGKPRDFPSYGWDNEYGHADVTVPPFEASKFLITNGDFVEFVQDGGYESERLWTEEGWKWRQYRGAIHPTFWVCARGCKSGCGSQLGDYSHCTLSATDVRLPFAYRAPFDVIAMPLDWPCDVNYHEAQAYCAWKGGRDGVPYRLPTEAEHRLMGSTAAARDSWELLARKTGSRTASVDRVESNRTSVESVSACTLLTPSDSEEDCEVSAASSSVKKVDALHRRGIEADVAFRSESGANLAFAFCSAS # ORIGINAL: g3785.t1 original gene structure, not modified by PASA NODE_860_length_16606_cov_41.6994 AUGUSTUS gene 15173 16373 . - . ID=g3785;Name=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS mRNA 15173 16373 . - . ID=g3785.t1;Parent=g3785;Name=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS exon 16176 16373 . - . ID=g3785.t1.exon1;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS CDS 16176 16373 . - 0 ID=cds.g3785.t1;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS exon 15757 15936 . - . ID=g3785.t1.exon2;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS CDS 15757 15936 . - 0 ID=cds.g3785.t1;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS exon 15509 15562 . - . ID=g3785.t1.exon3;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS CDS 15509 15562 . - 0 ID=cds.g3785.t1;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS exon 15173 15265 . - . ID=g3785.t1.exon4;Parent=g3785.t1 NODE_860_length_16606_cov_41.6994 AUGUSTUS CDS 15173 15265 . - 0 ID=cds.g3785.t1;Parent=g3785.t1 #PROT g3785.t1 g3785 VIVHGSPESTEHLRSALEQSFGATDATRAREVFAPGVGETVDVTATTNIFQLRLKDALVSSLNFAKVDTYEVAFVDGLIRAPSGAPSDVPALDVLPKGAKKGHAPVFLGELRLSDFKKVLAAADISAEFVGTSLVCNGAIAIRKDATGRVIIEGGLCDDYFAVRSLLYSQYAIV* # ORIGINAL: g6750.t1 original gene structure, not modified by PASA NODE_3842_length_2646_cov_32.5076 AUGUSTUS gene 105 2263 . + . ID=g6750;Name=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS mRNA 105 2263 . + . ID=g6750.t1;Parent=g6750;Name=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS exon 105 967 . + . ID=g6750.t1.exon1;Parent=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS CDS 105 967 . + 0 ID=cds.g6750.t1;Parent=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS exon 1347 1470 . + . ID=g6750.t1.exon2;Parent=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS CDS 1347 1470 . + 1 ID=cds.g6750.t1;Parent=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS exon 2009 2263 . + . ID=g6750.t1.exon3;Parent=g6750.t1 NODE_3842_length_2646_cov_32.5076 AUGUSTUS CDS 2009 2263 . + 0 ID=cds.g6750.t1;Parent=g6750.t1 #PROT g6750.t1 g6750 LIRENLAETSPKAVLSLLQFSISIASNNLIVAEAFVALSQDWLIPTIVGSTSDAVRTSADMLVGTLINLELEMRRQQQHEAEQRSRRRSGQIGHSQSNTPTPNGGEAAMDSSGVTGTPAHGNGSGSGDDGDDGLYRKLSHCLCGVLIRAASMVPKYIRPVRGSQSDASANTGAAGTVAGNAQKARALAMYLKALNRCITADASLCVKVARHNARDLYALLHAIDAAKLPYIADDNKREIIALLHAVSTNVVAARDLAADDQGIADLFGVLLFVKEDRLAVYNRTLLPRYYSLIHNLCNASPPLIGRLIMHQNFHWALRHVALESPDQPQACDELLSLLDMCVTAHPRSVDEVLRRTFEVPPTLTSAAPYARTIKCLVRSDADAFDFCNKGGLDVIGALLSFVKSMGAPAPLYA* # PASA_UPDATE: g363.t1, single gene model update, valid-1, status:[pasa:asmbl_3406,status:12], valid-1 NODE_2061_length_7877_cov_43.0943 . gene 203 2897 . - . ID=g363;Name=g363.t1 NODE_2061_length_7877_cov_43.0943 . mRNA 203 2897 . - . ID=g363.t1;Parent=g363;Name=g363.t1 NODE_2061_length_7877_cov_43.0943 . five_prime_UTR 2800 2897 . - . ID=g363.t1.utr5p1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 2755 2897 . - . ID=g363.t1.exon1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 2755 2799 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 2459 2558 . - . ID=g363.t1.exon2;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 2459 2558 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 2289 2344 . - . ID=g363.t1.exon3;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 2289 2344 . - 2 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 1817 2152 . - . ID=g363.t1.exon4;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 1817 2152 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 1487 1708 . - . ID=g363.t1.exon5;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 1487 1708 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 1130 1324 . - . ID=g363.t1.exon6;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 1130 1324 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 728 1001 . - . ID=g363.t1.exon7;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 728 1001 . - 0 ID=cds.g363.t1;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . exon 203 621 . - . ID=g363.t1.exon8;Parent=g363.t1 NODE_2061_length_7877_cov_43.0943 . CDS 203 621 . - 2 ID=cds.g363.t1;Parent=g363.t1;3_prime_partial=true #PROT g363.t1 g363 MALSAVTMRIRLGHQVAHDDIVCIIGSPASLREWSIGGAAPLVPANDDRTLWEGKIQLLTNIAFAYKYIVKGSDGSLVSYEDFAQNRVFTPTASECETDDGVFGATPGTSTTSRLRLGGRRFVSVGCNGNVEVNLKFGVKYGGRCEVLRGELADEGSCIVVHDTKGTSYTLPLPLTKLRIVSFSFKREQEALVFLSAYASPTPDPDKLVARSAITASQFVNSAGLVRVNLLDNTLRPVSEIAVGYLVCKPFHHPEINLSKLGAVVDLKARGDVAVEVGHRGSGSNKRGSRIDENTILSFVAAARNGVSLVEFDVMLSKDGIPVIHHDHVISVGRAGVRVPVHTLTLAQLREVKDGVRGAAPKQKPVLKRTRSWDRLIDEPQRGTYAIADHFPTLVEAFTEVPVSLGFDIEIKSMTDIGMEQYNTTPPDKNALVDNVLRVVFDNVGDRLVMFSSFDPDVCALLMAKQPRFPVFLITWWAGPDEDVSGSDTRCHSLDGALDAAGEAELRGIVCEARCMLEAPGDIRRIKAMGLMLLTYGNENEVPEAIFAQ # ORIGINAL: g365.t1 original gene structure, not modified by PASA NODE_2061_length_7877_cov_43.0943 AUGUSTUS gene 6557 7706 . - . ID=g365;Name=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS mRNA 6557 7706 . - . ID=g365.t1;Parent=g365;Name=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS exon 7644 7706 . - . ID=g365.t1.exon1;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS CDS 7644 7706 . - 0 ID=cds.g365.t1;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS exon 7232 7333 . - . ID=g365.t1.exon2;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS CDS 7232 7333 . - 0 ID=cds.g365.t1;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS exon 6848 6862 . - . ID=g365.t1.exon3;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS CDS 6848 6862 . - 0 ID=cds.g365.t1;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS exon 6557 6616 . - . ID=g365.t1.exon4;Parent=g365.t1 NODE_2061_length_7877_cov_43.0943 AUGUSTUS CDS 6557 6616 . - 0 ID=cds.g365.t1;Parent=g365.t1 #PROT g365.t1 g365 MRFWDWRSGHKFQEFKTPVQPGSLDSEAGIMAMSFDMTGSRLITGEADKTIKVYKEDENATEETHPLNWQPSINTGRKF* # PASA_UPDATE: g364.t1, single gene model update, valid-1, status:[pasa:asmbl_3405,status:3], valid-1 NODE_2061_length_7877_cov_43.0943 . gene 4371 6360 . + . ID=g364;Name=g364.t1 NODE_2061_length_7877_cov_43.0943 . mRNA 4371 6360 . + . ID=g364.t1;Parent=g364;Name=g364.t1 NODE_2061_length_7877_cov_43.0943 . five_prime_UTR 4371 4497 . + . ID=g364.t1.utr5p1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 4371 4586 . + . ID=g364.t1.exon1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 4498 4586 . + 0 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 4717 4817 . + . ID=g364.t1.exon2;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 4717 4817 . + 1 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 5074 5230 . + . ID=g364.t1.exon3;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 5074 5230 . + 2 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 5314 5395 . + . ID=g364.t1.exon4;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 5314 5395 . + 1 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 5604 5688 . + . ID=g364.t1.exon5;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 5604 5688 . + 0 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 5787 5887 . + . ID=g364.t1.exon6;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 5787 5887 . + 2 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . exon 6129 6360 . + . ID=g364.t1.exon7;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . CDS 6129 6170 . + 0 ID=cds.g364.t1;Parent=g364.t1 NODE_2061_length_7877_cov_43.0943 . three_prime_UTR 6171 6360 . + . ID=g364.t1.utr3p1;Parent=g364.t1 #PROT g364.t1 g364 MSLQWQLVAGLLYAEIGAIAFLCLPLPVSWQRYLTLKIGNSQLVQKAKPVLQVTFLAVFLLFLDAIREMWRADESLASSSQQKGVKDVHMYTHLQMHLFRAQRNFYITGFSLFLLMVLSRFYRFMYDIASVEAVVTQSNNARKEYDRMVDENKTLGEKVKKLDSSLKEATDDLKSTKTNLTAVQSQAKNTETEYMRLLDEVSASQKKGGASSEPKKDK* # PASA_UPDATE: g5643.t1, single gene model update, valid-1, status:[pasa:asmbl_1412,status:12], valid-1 NODE_1381_length_11671_cov_42.2988 . gene 8528 11513 . - . ID=g5643;Name=g5643.t1 NODE_1381_length_11671_cov_42.2988 . mRNA 8528 11513 . - . ID=g5643.t1;Parent=g5643;Name=g5643.t1 NODE_1381_length_11671_cov_42.2988 . exon 10870 11513 . - . ID=g5643.t1.exon1;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . CDS 10870 11513 . - 0 ID=cds.g5643.t1;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . exon 9483 10614 . - . ID=g5643.t1.exon2;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . CDS 9483 10614 . - 1 ID=cds.g5643.t1;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . exon 8528 9104 . - . ID=g5643.t1.exon3;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . CDS 8841 9104 . - 0 ID=cds.g5643.t1;Parent=g5643.t1 NODE_1381_length_11671_cov_42.2988 . three_prime_UTR 8528 8840 . - . ID=g5643.t1.utr3p1;Parent=g5643.t1 #PROT g5643.t1 g5643 MYGVIGLAGVLMETDLTAEQRDLLSTIRASGDMLLSLINDILDFSKYESDAIELERRPFEMRQCIEDVAELIAFKVTSDEIHINYFVAPSVPTTLLGDDTRFRQVLMNLLSNAVKFTEKGDVTITVRVASEGDRRRAASVSSTDPPSGLRAGAVGAFAGDGERASLRASGSASVRLAPLMPDDVAICVDVEDTGIGIPSDRVSLLFQNFMQADSSTTRRYGGTGLGLAICRKLTQLMRGNVWVDSTFGIGSKFSFVVVLTKAPPLPVQPSDIGTAIIGRYDGLLGRRMVVVDSWDNDRLALSSLLGLQGIEHDAFGSASEALRHATALGRDRVAGFMVDLQTLRAANELHLLHAMAQLRPVALLTLSRASAERARDEHSDAIAILCKPIKREVLNKTLSRMHQFIDDPTATSSVIVSSASHVIDREAVNSVIGRFKETAAFANAAATASACSIPSAPHAGVQANTALPLSGARGVHVPYLQLPNSTVFGSSIATTTTPPRPSVGAEFMSAPRSPLPVRERDGRQETTPVLATDYPLRILVVDDDSMCRRVTKIMLGRLGYEPDMCASGLEAIERVQKHPYDVIFMDISMPGMNGIDATEAMHRYFNSANLSRGDLQVHRPWIVAVTANAMREDQQKYLSSGFDDFIGKPAKLQNIRERLVAFVERRDAHFRGCDPLHAS* # ORIGINAL: g5642.t1 original gene structure, not modified by PASA NODE_1381_length_11671_cov_42.2988 AUGUSTUS gene 3345 7531 . + . ID=g5642;Name=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS mRNA 3345 7531 . + . ID=g5642.t1;Parent=g5642;Name=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 3345 3403 . + . ID=g5642.t1.exon1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 3345 3403 . + 0 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 3695 3813 . + . ID=g5642.t1.exon2;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 3695 3813 . + 1 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 3952 5951 . + . ID=g5642.t1.exon3;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 3952 5951 . + 2 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 6185 6409 . + . ID=g5642.t1.exon4;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 6185 6409 . + 0 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 6670 6750 . + . ID=g5642.t1.exon5;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 6670 6750 . + 0 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 6987 7097 . + . ID=g5642.t1.exon6;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 6987 7097 . + 0 ID=cds.g5642.t1;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS exon 7307 7531 . + . ID=g5642.t1.exon7;Parent=g5642.t1 NODE_1381_length_11671_cov_42.2988 AUGUSTUS CDS 7307 7531 . + 0 ID=cds.g5642.t1;Parent=g5642.t1 #PROT g5642.t1 g5642 MMIDDERQLKKWLAGHIEPLTEADPEALAKYILALLKNEESTADLRSKCVRELSDFLGDETGDFVATLFATVESRSYISGGSQSAANNQSKTQPTLQQSHSNPSATAASTRDSQRTDLRSALDGQRDQQRDSRRDDGRGGRRRDEDETRDARDSHRRGHRGGREREDHDAGKRRMEDGDESGRAKRRREDEAGDAQHYRPAPAHEGSAHAPGQQPLQAQMHRSGMAPPHQLPMIPPHVLFGREGLGGMGALGGLGVGGGPGAAGAAGGQGAPGAPGSGQPCRDYLERGVCLRGKSCPFDHGAAKPIMIETPGFPPGGMYPMGVGVPGMRPPGGLGMYAPGLPGMRPPFMHAAMAAMLQQQQMQQQHQKQNGANGPGAPEAYNPEEPTMTGLGRHDRNDERAHLQNDGMYDRDRRFDGDRNNDDGDGFRRGGRGGSRGGRGGRGGGDRGRGDDREGGGRGGMSSRGFGARHEPYDRSKQGRRSDTTLEIKNIPPELNNIGALLEYFKRFGDIANIQVGLGSFRKDAVIQYARPADARSAHECPDAVLGNRFIKVFWSHEAPVETEEVKAVEAAAAAAAAAAGNSGNSGTEAAAGADGVAAGGAAAPAVAKAATTPGKNTVLKSIIEMQKMQEQLIQRQIGEQKALVEKMTSGTVSAKMREEIMKRMESLSNSLAQAKKQQAMATAAAAAQHSQQQSLQQSHAQSQAAHAQNAPAPHLANKLAELKQEAASLGLLDRPLSAGPKPYAPRGRGAFGAPRGRGAAAGARGRGGRPGNSVLDLRTTKVLVSGYLSDDKDDLVTHLSAIAEVDGVTHGEKASIVTFKTRKGAETAIAHGTRFKGSLLNMSWYNATPKPTTAAPNTTNGTSAHSTDKVETEAEAQGAPAAAEADADANADAAPKDSKDADLGDDGLLDDYDDDLLKYDDHVDTGADFDDDDLGLSA* # PASA_UPDATE: g5641.t1, single gene model update, valid-1, status:[pasa:asmbl_1411,status:12], valid-1 NODE_1381_length_11671_cov_42.2988 . gene 598 2721 . + . ID=g5641;Name=g5641.t1 NODE_1381_length_11671_cov_42.2988 . mRNA 598 2721 . + . ID=g5641.t1;Parent=g5641;Name=g5641.t1 NODE_1381_length_11671_cov_42.2988 . five_prime_UTR 598 619 . + . ID=g5641.t1.utr5p1;Parent=g5641.t1 NODE_1381_length_11671_cov_42.2988 . exon 598 2721 . + . ID=g5641.t1.exon1;Parent=g5641.t1 NODE_1381_length_11671_cov_42.2988 . CDS 620 2530 . + 0 ID=cds.g5641.t1;Parent=g5641.t1 NODE_1381_length_11671_cov_42.2988 . three_prime_UTR 2531 2721 . + . ID=g5641.t1.utr3p1;Parent=g5641.t1 #PROT g5641.t1 g5641 MDIVFKRLFDRLRSVFARDQIVPTLNTAAAQREDAGSELASFGSLPIEIIVNHIVPHLNNASLMALGRVNSMLRLHLRHKPLFHLWPLYNNKYINSSSFRSEVQSLIPADRIILTGHGLTDLSPFIGAHTVDIRLCPDILDLSPLHGVHTVLLSGPQPIVDLTPLASCHTVQTLYVGYGNQWNLSILSQLNVIALTFVNTLADIAPLAHVPTFILSGVNNVSSLSGVRHLTLSDCDAEVNGVECLSNAETLVMRACNLSRIAFPPLPSRLRTVIIRRSTLVSIPTEFRDLHTLDLSSSPLLSDASCAANIHTLILSDCDSLIDVSALGRVHTLNLSTSRPVERDVSCLGHVYTLTLAGNGNVRGVSALAHVHTLTLTGTVLLGGDDCIRSWENVHTLDLTGCSVQRLPSLPSLHSLCLAGSYICDVSSLSAVHTLNLQHALDVEDVSALGRVHFLNLTRCRKVRSVSALGHVHTLILSGLPEIVDVSALGGVHELHLDHCASVTDVSALGSVHTLRLCSSPVSDVSSLGGVYSLFLDGCKCVRDVRHLGRVHHLSLKSCESLKDVSALGGVHTLDLSNCNRIRNVFALGNVHSLCISGCRKVVEVSALRGVCILEMQNCPRANGQSLIPYVRKLTL* # ORIGINAL: g2717.t1 original gene structure, not modified by PASA NODE_5911_length_683_cov_50.7204_potentialcontaminant AUGUSTUS gene 1 683 . - . ID=g2717;Name=g2717.t1 NODE_5911_length_683_cov_50.7204_potentialcontaminant AUGUSTUS mRNA 1 683 . - . ID=g2717.t1;Parent=g2717;Name=g2717.t1 NODE_5911_length_683_cov_50.7204_potentialcontaminant AUGUSTUS exon 1 683 . - . ID=g2717.t1.exon1;Parent=g2717.t1 NODE_5911_length_683_cov_50.7204_potentialcontaminant AUGUSTUS CDS 1 683 . - 2 ID=cds.g2717.t1;Parent=g2717.t1 #PROT g2717.t1 g2717 GEFEGTRLCQTPPQTCAFSPLRHLYFEINPLVIDHLRKKFGDSIKHFNDFELVKVGIARQFDAEAMDKTMENHLKWYETYHPNPAVEWIHPSASTYFPNGMVDACDREGNLLHFSRPCVGGEYNPSAVVKEMGVDALLRMVTLQHEDMKANLRSKGYAHHRRYTSVYDLKDLGFIDGKTMEFAKAFADTNKNHQLEIVGKIVMINCSFMFRAVFKTISLFMDERTRD # ORIGINAL: g8665.t1 original gene structure, not modified by PASA NODE_865_length_16556_cov_38.3624 AUGUSTUS gene 13663 16378 . + . ID=g8665;Name=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS mRNA 13663 16378 . + . ID=g8665.t1;Parent=g8665;Name=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 13663 13803 . + . ID=g8665.t1.exon1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 13663 13803 . + 0 ID=cds.g8665.t1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 14374 14447 . + . ID=g8665.t1.exon2;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 14374 14447 . + 0 ID=cds.g8665.t1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 14727 14839 . + . ID=g8665.t1.exon3;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 14727 14839 . + 1 ID=cds.g8665.t1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 15193 15305 . + . ID=g8665.t1.exon4;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 15193 15305 . + 2 ID=cds.g8665.t1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 15552 15735 . + . ID=g8665.t1.exon5;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 15552 15735 . + 0 ID=cds.g8665.t1;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS exon 16205 16378 . + . ID=g8665.t1.exon6;Parent=g8665.t1 NODE_865_length_16556_cov_38.3624 AUGUSTUS CDS 16205 16378 . + 2 ID=cds.g8665.t1;Parent=g8665.t1 #PROT g8665.t1 g8665 MLYIPQGLIGSGKFVFFIDLDLDDCLKAAPTIPGVLYAAYQMMFALMVPVLVTGAWAEKIPFRTFVVFTIVWPFLVYYPLAHWIWNSDGFLNKLGLLDFAGGLTIHTTAGAAAFVVAVMLEPRRRHDSLQDTAHNIPLTVFGGSIVWVAWFFFNPGSANRANVQAVNALLATQVSACCSTATWLFWGWKTEGKVRVTSIISGALAGCAAITPASGFVPSQIAFLTGVIAGTASFFCGVFMKRTLKIDDVLDVTSLQAVPGIVGILM # PASA_UPDATE: g8662.t1, single gene model update, valid-1, status:[pasa:asmbl_9738,status:3], valid-1 NODE_865_length_16556_cov_38.3624 . gene 702 3994 . + . ID=g8662;Name=g8662.t1 NODE_865_length_16556_cov_38.3624 . mRNA 702 3994 . + . ID=g8662.t1;Parent=g8662;Name=g8662.t1 NODE_865_length_16556_cov_38.3624 . five_prime_UTR 702 861 . + . ID=g8662.t1.utr5p1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 702 889 . + . ID=g8662.t1.exon1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 862 889 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 1192 1574 . + . ID=g8662.t1.exon2;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 1192 1574 . + 2 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 1709 1888 . + . ID=g8662.t1.exon3;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 1709 1888 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 2056 2319 . + . ID=g8662.t1.exon4;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 2056 2319 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 2478 2543 . + . ID=g8662.t1.exon5;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 2478 2543 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 2761 2901 . + . ID=g8662.t1.exon6;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 2761 2901 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 3061 3381 . + . ID=g8662.t1.exon7;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 3061 3381 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . exon 3534 3994 . + . ID=g8662.t1.exon8;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . CDS 3534 3680 . + 0 ID=cds.g8662.t1;Parent=g8662.t1 NODE_865_length_16556_cov_38.3624 . three_prime_UTR 3681 3994 . + . ID=g8662.t1.utr3p1;Parent=g8662.t1 #PROT g8662.t1 g8662 MGTIRQVLTVFENYQKARATFVQTVAELATRPQNIEALQNAGVMALLRPLLLDTVPTVQQTAALALGRLANYNDDLAEAVVSGDILPQLVYSLAEQNRFYKKAAAFVLRAVAKHSPQLAQAVVDSGALDALVACLEEFDPGVKEAAAWALGYIARHNAELSQAVVDAGAVPLLVLCVQEPELSLKRIAASALSDICKHSPELAQAVVDSGAIAYLAPLIRSADEKLKRQVCSALAQIAKHTVDLAEMVVEGEIFPAVLTCLRDQDQYVRKNAATLIREIAKHTPELAQLIVNASGVGALVTYIEENKGNARLPGIMTLGYIGSFTEHLAMAVIVSKGVLPLANALVTEPEDHIKAAAAWALGQIGRHSPEHAKAVAEANIFPKLLAVYMDQQTSGDLQTKTKRALKCIIEKCVDLQALEPLLHDAPPNILKYVIAQFAKVLPHDVKARRQFVHSGGLKKIQEIPVESGSILQEYINTINNCYPEEIVRYYSPSYSQTLLEKIEQYQPAA* # PASA_UPDATE: g8664.t1, single gene model update, valid-1, status:[pasa:asmbl_9736,status:3], valid-1 NODE_865_length_16556_cov_38.3624 . gene 6703 9603 . - . ID=g8664;Name=g8664.t1 NODE_865_length_16556_cov_38.3624 . mRNA 6703 9603 . - . ID=g8664.t1;Parent=g8664;Name=g8664.t1 NODE_865_length_16556_cov_38.3624 . five_prime_UTR 9403 9603 . - . ID=g8664.t1.utr5p1;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . exon 9330 9603 . - . ID=g8664.t1.exon1;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . CDS 9330 9402 . - 0 ID=cds.g8664.t1;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . exon 7906 9205 . - . ID=g8664.t1.exon2;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . CDS 7906 9205 . - 2 ID=cds.g8664.t1;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . exon 6703 7780 . - . ID=g8664.t1.exon3;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . CDS 7594 7780 . - 1 ID=cds.g8664.t1;Parent=g8664.t1 NODE_865_length_16556_cov_38.3624 . three_prime_UTR 6703 7593 . - . ID=g8664.t1.utr3p1;Parent=g8664.t1 #PROT g8664.t1 g8664 MATSRLFVVALIAALIASSSAALADDFWDLSEFEVKDNANANKDRRNVFNPTATATATATPDITNAFSSEIFSHVSSDVFSTQAPSETTQPAPESTSSSGASSVETTSVAKPTASASSVEAIETATTEASLIFTDVTVVSINSQFTDTATATATMTLTDIFIPSFSPEVTESPTPDVEITSSSSPAAASSRVDDKKTTSSASSSAAPSPSTTRVEPKQEVTTSATSTRVATSTVAAFVRPTSLAGFSPEQLATAVRVSLRGVKASSFKGSAMENSFKSEVAKAANKALSKSRRAVMIAEEDIETPELFIGSDLEKAFKVEAMRAANEAIRSKRASSVVVTVDDIVILFYIDTASGLDLVMLLAVYSADGTPIIISGDVLASAINDSVAALAALGLDVSGVVLNPVDPSNPDGGSPSNPGGSTAASSSKNLAWVAGPVVGGIALVGIAVGGVFYYRKTRTGTYNLERIRIPSDNAIGSHTVKADGTDIEAGPEAPLPGVIAPPTEDMTMATVNDWNGAAA* # PASA_UPDATE: g8663.t1, single gene model update, valid-1, status:[pasa:asmbl_9737,status:12], valid-1 NODE_865_length_16556_cov_38.3624 . gene 4785 6534 . + . ID=g8663;Name=g8663.t1 NODE_865_length_16556_cov_38.3624 . mRNA 4785 6534 . + . ID=g8663.t1;Parent=g8663;Name=g8663.t1 NODE_865_length_16556_cov_38.3624 . five_prime_UTR 4785 4847 . + . ID=g8663.t1.utr5p1;Parent=g8663.t1 NODE_865_length_16556_cov_38.3624 . exon 4785 6534 . + . ID=g8663.t1.exon1;Parent=g8663.t1 NODE_865_length_16556_cov_38.3624 . CDS 4848 6482 . + 0 ID=cds.g8663.t1;Parent=g8663.t1 NODE_865_length_16556_cov_38.3624 . three_prime_UTR 6483 6534 . + . ID=g8663.t1.utr3p1;Parent=g8663.t1 #PROT g8663.t1 g8663 MRLTLLVEVAFVWLAFTSVAFPTVTDASSDGNSQAKRRETSVDDTNLAEWNTSFNAWKTEFARWKQAGACNGTQKQNNTNGGDGLLADPPVCKFSYFPTPTGKSSGVVDASALDSILPGNDAGEAVWKSIFPQIDPASAIYKKSGCSQTTGEGRPDWGPGCAVFGSGDLSGLANFRKAASLFPEFCNGPDSNRNLVELSAFFGNVKQETSGLLYSAELGSPKDALYGRGALQLTGAVNYVLATQGIMGPEKYYTAVSLSGAVTGPCALNSNDQPATDACWEACSEASPAQPPQGSGYNTCADPSVASQDPIAVWATAIWFWMNKPISPVVAGNLGLKGEAACSTAHNLVQDPVYACGSTNTDTVKNSGAATPVGGDGGWCPAAAMAQIGCPSCCTKIIPASGTPDPMSINRVGGYVEIAMLLGDPSAKADANSLFCLLLNVCVNGAQGSGSSTCAGNTAGLSYDCYLDGSCTGGGGKSICGGVEWTGADRTGVTCQAIPGNPQGATNKDCAACEGSQMFWPCDYVDISGVKTPLCQWVGPRLSS* # PASA_UPDATE: g10372.t1, single gene model update, valid-1, status:[pasa:asmbl_4913,status:12], valid-1 NODE_2737_length_5278_cov_39.0121 . gene 3565 5024 . - . ID=g10372;Name=g10372.t1 NODE_2737_length_5278_cov_39.0121 . mRNA 3565 5024 . - . ID=g10372.t1;Parent=g10372;Name=g10372.t1 NODE_2737_length_5278_cov_39.0121 . five_prime_UTR 5018 5024 . - . ID=g10372.t1.utr5p1;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . exon 4859 5024 . - . ID=g10372.t1.exon1;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . CDS 4859 5017 . - 0 ID=cds.g10372.t1;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . exon 4250 4332 . - . ID=g10372.t1.exon2;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . CDS 4250 4332 . - 0 ID=cds.g10372.t1;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . exon 3565 3731 . - . ID=g10372.t1.exon3;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . CDS 3644 3731 . - 1 ID=cds.g10372.t1;Parent=g10372.t1 NODE_2737_length_5278_cov_39.0121 . three_prime_UTR 3565 3643 . - . ID=g10372.t1.utr3p1;Parent=g10372.t1 #PROT g10372.t1 g10372 MREAYKCVQTVNIRGREAVVDRERGRAVEGWRPGKEGGGLGSPRKGTQGFARGPPYFGDPSRIDWRKEEERDRRASEHVARTIAGVKRKRMEYWADIRRSRYMAGFKHP* # ORIGINAL: g1351.t1 original gene structure, not modified by PASA NODE_3468_length_3404_cov_38.216 AUGUSTUS gene 399 3032 . - . ID=g1351;Name=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS mRNA 399 3032 . - . ID=g1351.t1;Parent=g1351;Name=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 3003 3032 . - . ID=g1351.t1.exon1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 3003 3032 . - 0 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 2760 2851 . - . ID=g1351.t1.exon2;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 2760 2851 . - 0 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 2523 2583 . - . ID=g1351.t1.exon3;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 2523 2583 . - 1 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 1963 2120 . - . ID=g1351.t1.exon4;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 1963 2120 . - 0 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 1398 1518 . - . ID=g1351.t1.exon5;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 1398 1518 . - 1 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 1072 1195 . - . ID=g1351.t1.exon6;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 1072 1195 . - 0 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 658 780 . - . ID=g1351.t1.exon7;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 658 780 . - 2 ID=cds.g1351.t1;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS exon 399 494 . - . ID=g1351.t1.exon8;Parent=g1351.t1 NODE_3468_length_3404_cov_38.216 AUGUSTUS CDS 399 494 . - 2 ID=cds.g1351.t1;Parent=g1351.t1 #PROT g1351.t1 g1351 MFMKITVCAHELNFVYLLNKILPSEIRAIAWCPVEPTFSARFDCTYREYKYFFPKGNLNIEQMSKAAALFEGENDYRNFCRMDVYNGVLNYRRSILKFSVGPSASQVDRTAGDGQHSAYEMYEFTIRGTAFLWNQIRCMVSVLFLVGQGLESPEVVTGMLDIERCPGRPLYTLASEYPLMLYNCAFDAIQWRWDPAASSRNWLRLEAMWNEHATRAQLTSCVLHAIKQSGSVDGVHDPGHVVFAMMKCMMNGSTTAEKHKPLLSRTQA # PASA_UPDATE: g7350.t1, single gene model update, valid-1, status:[pasa:asmbl_4089,status:12], valid-1 NODE_2341_length_6647_cov_50.5636 . gene 5945 6455 . + . ID=g7350;Name=g7350.t1 NODE_2341_length_6647_cov_50.5636 . mRNA 5945 6455 . + . ID=g7350.t1;Parent=g7350;Name=g7350.t1 NODE_2341_length_6647_cov_50.5636 . five_prime_UTR 5945 6072 . + . ID=g7350.t1.utr5p1;Parent=g7350.t1 NODE_2341_length_6647_cov_50.5636 . exon 5945 6189 . + . ID=g7350.t1.exon1;Parent=g7350.t1 NODE_2341_length_6647_cov_50.5636 . CDS 6073 6189 . + 0 ID=cds.g7350.t1;Parent=g7350.t1 NODE_2341_length_6647_cov_50.5636 . exon 6366 6455 . + . ID=g7350.t1.exon2;Parent=g7350.t1 NODE_2341_length_6647_cov_50.5636 . CDS 6366 6455 . + 0 ID=cds.g7350.t1;Parent=g7350.t1 #PROT g7350.t1 g7350 MYKLDLPIDYAERAAIERRRSLEAERKRRIFDARTRTIGVDVHGLNEQLYDKRNIEQIDAERDYAISK* # PASA_UPDATE: g7349.t1, single gene model update, valid-1, status:[pasa:asmbl_4088,status:3], valid-1 NODE_2341_length_6647_cov_50.5636 . gene 157 4621 . + . ID=g7349;Name=g7349.t1 NODE_2341_length_6647_cov_50.5636 . mRNA 157 4621 . + . ID=g7349.t1;Parent=g7349;Name=g7349.t1 NODE_2341_length_6647_cov_50.5636 . five_prime_UTR 157 402 . + . ID=g7349.t1.utr5p1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . exon 157 1096 . + . ID=g7349.t1.exon1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . CDS 403 1096 . + 0 ID=cds.g7349.t1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . exon 1452 1678 . + . ID=g7349.t1.exon2;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . CDS 1452 1678 . + 2 ID=cds.g7349.t1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . exon 1914 2007 . + . ID=g7349.t1.exon3;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . CDS 1914 2007 . + 0 ID=cds.g7349.t1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . exon 2150 4621 . + . ID=g7349.t1.exon4;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . CDS 2150 4371 . + 2 ID=cds.g7349.t1;Parent=g7349.t1 NODE_2341_length_6647_cov_50.5636 . three_prime_UTR 4372 4621 . + . ID=g7349.t1.utr3p1;Parent=g7349.t1 #PROT g7349.t1 g7349 MARVRVLLMALCLVVFASKDASAVSPEASYKLARFTVSPQGDAAAEHRIIDALVKKGGIAAEDMATRKGVWVEVLATARQLNRALASLEADGGEVAGMSANFEILSQDASADAARALTDDLSRRRREARNKRTPEGIDAICEYGLGSVGGYPSLSELNATMWAFHDSYPDIISRPILLTPAAFSVEGRPITAVRMGVVRGESPWSDNVTAIQLPAYSNKPRVLYTGLHHAREPASATALIYFMCSVVRGHLRAVAQAAVTPPLSFAQYTSFADTMDETAVPEDEVSMATAEFLLNEREIWIVPAVNPDGYEYNRINHPTGGGLHRKNRRPGCNYNAGIDLNRNYGRNWGSDDGSSSDKCDDTYRGASAFSEPETVAVRDFSDALQFSASFNYHTWGNAIVYSPEVAPVIAEPARQLALAGRYTWGTDDQVLGYTTSGNADDYFIAGDSGPIDMPRSLSFTPEVGMCPSSNFRSALCFWPSPAFVLTMIRWGAPANVLLASMAGAQFSTAASFNGSYTEDTDDVIVTPGTTMPVVITLTNTGRGASQHPLRVLVVARSPFFFVENETFALARMNATLSGTNATVPGVNSSFHVEIQWFNVSAMPVGATVNISFVCRVDVNASRGLPEAIRVVVFEGDHVRHRRTLRIPVGRRHSLSLGDYGDTGIPYGWIPSTLSNNGWKVVKTPRYTDGSIQNGYTYTLRPSGTSYQGAPYAYVTTGGAVDLRSARQAYVRFDAQWDIESMYDMCSFQVSTDGWTWTSLPGLWTREASGIGIQDPAILPHGWDGSQVPIIRERIDLDAYIGKRVLLRFVMASDGNLEKSGFAAYNIQLVVVDCAGAECPPPTPDEGLSPGAIVGIVIAIIGACSMGIAAVVVHRSKVTKVKTLKPPLGADDCEGGHASHDDTRKELHDADGAPAKDLRLDVSESRAWVEGEEGRPQLSCERTPPPPPYSADSATRTDWLARGESAMEGGASTLALTQSIPRYYYCDDEGRPLTDENGSVCYFYYGDDQVTGEKGACFCFYAPLSDTVHLSAAFPVYHGDIPGACREERPNDSPAPTLRISEALARALSAKRGEERHHP* # ORIGINAL: g10213.t1 original gene structure, not modified by PASA NODE_1764_length_9332_cov_42.6249 AUGUSTUS gene 6246 8014 . + . ID=g10213;Name=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS mRNA 6246 8014 . + . ID=g10213.t1;Parent=g10213;Name=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 6246 6569 . + . ID=g10213.t1.exon1;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 6246 6569 . + 0 ID=cds.g10213.t1;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 6743 6923 . + . ID=g10213.t1.exon2;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 6743 6923 . + 0 ID=cds.g10213.t1;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 7246 7425 . + . ID=g10213.t1.exon3;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 7246 7425 . + 2 ID=cds.g10213.t1;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 7677 8014 . + . ID=g10213.t1.exon4;Parent=g10213.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 7677 8014 . + 2 ID=cds.g10213.t1;Parent=g10213.t1 #PROT g10213.t1 g10213 MPFAEKKTFIHAGTINVRCHGKVNMRQGSFLQGDIDPTIVGTQGISCTTLGTSSVTGDSGIVDCSIRYVTDRRDTEVGLHHTYAFVFPSEIETFNAFVVNTNQDGKIEVWLRNSLNAENQTDVMILASEGPADDEFVSSANSSAIVYATASFDDLTCRASIMPLFIKPRVDCVWGEWGNYTKCSKSCDDGKGKKPSKRRTREELIHQENGGAPCEVSTQTRACNSQSCKCADKVLTTTDEETGNTVFDVFFCDSENNWLVSTFTSEVLLKDLVGSPCLDDFWGAATKDTTCGVCFDRSEFKSFSGRTKASPHADVSPYYFCNPTDPNPQTLTAFSPPVEA* # PASA_UPDATE: g10212.t1, single gene model update, valid-1, status:[pasa:asmbl_2558,status:12],[pasa:asmbl_2559,status:12], valid-1 NODE_1764_length_9332_cov_42.6249 . gene 319 3495 . + . ID=g10212;Name=g10212.t1 NODE_1764_length_9332_cov_42.6249 . mRNA 319 3495 . + . ID=g10212.t1;Parent=g10212;Name=g10212.t1 NODE_1764_length_9332_cov_42.6249 . five_prime_UTR 319 319 . + . ID=g10212.t1.utr5p1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 319 501 . + . ID=g10212.t1.exon1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 320 501 . + 0 ID=cds.g10212.t1;Parent=g10212.t1;5_prime_partial=true NODE_1764_length_9332_cov_42.6249 . exon 711 828 . + . ID=g10212.t1.exon2;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 711 828 . + 1 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 1158 1227 . + . ID=g10212.t1.exon3;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 1158 1227 . + 0 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 1404 1591 . + . ID=g10212.t1.exon4;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 1404 1591 . + 2 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 1861 2002 . + . ID=g10212.t1.exon5;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 1861 2002 . + 0 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 2270 2338 . + . ID=g10212.t1.exon6;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 2270 2338 . + 2 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 2660 2838 . + . ID=g10212.t1.exon7;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 2660 2838 . + 2 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . exon 3221 3495 . + . ID=g10212.t1.exon8;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . CDS 3221 3322 . + 0 ID=cds.g10212.t1;Parent=g10212.t1 NODE_1764_length_9332_cov_42.6249 . three_prime_UTR 3323 3495 . + . ID=g10212.t1.utr3p1;Parent=g10212.t1 #PROT g10212.t1 g10212 HILSAPKEVNSLSGQKLHLNMSVHYISFSAHSDFMQTSEYIDTLRPPNVVLVHGDANEMGRLKSALQRRYEDRDDYKLVLHNPSNCQSVELNFRGEKLAKAMGAIAANAPKDEQVVSGILVKKGFDHLLLNAADIREFTDIVTSSVVQRQCVPFHGPFSLLRYYVSQMYGTIEFAKDRPNDNDAMLVFGTVTVSKHDETSVLLEWDAGPVNDMVADSVLAIVLQAVASPATVKMMKNEGGHCHSHTHAPAGDGEEDDGAKTLADYLARHFGSASVLEEGALDDTPTESLPSIGGKRSRVRVVSSDGPTATVDLDSKKVNASDDGFRVRVAATAGRVHSVFGKLDGTPDV* # ORIGINAL: g10214.t1 original gene structure, not modified by PASA NODE_1764_length_9332_cov_42.6249 AUGUSTUS gene 8349 8972 . - . ID=g10214;Name=g10214.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS mRNA 8349 8972 . - . ID=g10214.t1;Parent=g10214;Name=g10214.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 8766 8972 . - . ID=g10214.t1.exon1;Parent=g10214.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 8766 8972 . - 0 ID=cds.g10214.t1;Parent=g10214.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS exon 8349 8537 . - . ID=g10214.t1.exon2;Parent=g10214.t1 NODE_1764_length_9332_cov_42.6249 AUGUSTUS CDS 8349 8537 . - 0 ID=cds.g10214.t1;Parent=g10214.t1 #PROT g10214.t1 g10214 MLATGWGSKPGVRIVFGRWQDVLDQLEVYDGIFFDTFGEFYEDQREFHEAIPRLLRQGGIYSFFNGLGATNAFFHDMYCRIAAMDLSSMGLDTRYVEMPMDADGDHWEGVKGKYWTLKKYLLPVCTHKLNT* # PASA_UPDATE: g14080.t1, single gene model update, valid-1, status:[pasa:asmbl_3950,status:12], valid-1 NODE_228_length_30426_cov_41.1889 . gene 25496 30308 . + . ID=g14080;Name=g14080.t1 NODE_228_length_30426_cov_41.1889 . mRNA 25496 30308 . + . ID=g14080.t1;Parent=g14080;Name=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 25496 25741 . + . ID=g14080.t1.exon1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 25496 25741 . + 0 ID=cds.g14080.t1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 25883 28958 . + . ID=g14080.t1.exon2;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 25883 28958 . + 0 ID=cds.g14080.t1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 29081 29314 . + . ID=g14080.t1.exon3;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 29081 29314 . + 2 ID=cds.g14080.t1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 29502 29536 . + . ID=g14080.t1.exon4;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 29502 29536 . + 2 ID=cds.g14080.t1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 29698 29749 . + . ID=g14080.t1.exon5;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 29698 29749 . + 0 ID=cds.g14080.t1;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . exon 29881 30308 . + . ID=g14080.t1.exon6;Parent=g14080.t1 NODE_228_length_30426_cov_41.1889 . CDS 29881 30308 . + 2 ID=cds.g14080.t1;Parent=g14080.t1 #PROT g14080.t1 g14080 MEAIRRAVGVARRLRAQYSLRRLSRVGRRRLAIVAVIAVVGYMADLPAILLGDMLAPILILAGVAGVAAIAFAYVQRLKASKASALPMYAGSVLLTSPTPSGALEGLGSVSIDLTSAYPAYGDETHGQPNTHLPLAPPPASDPYCATPYEQVHYTGGTFHAHPSYGMPPHSNLQHLVHPNTHQGAPAASSPWDSKRDWEDVTPQAPNPPVYVPTGPAYPDQAFAGYGAQQGSSGQQHSNSNTLPVPLTSSPSSSAQGSPRGSRQSNKRITPPKLGAVRQSLQQSPSRPLSPLPPSGEASPRLASDVQSPPNPIQASQDERAAVQPVTVEVASAAAAIPIVMEVSAVSAGIASPLAFAHFPADVPTSGPTPFSHVTQIGAFRQPDFASALTDNDDDLAAVGVGVESAPLIAIAPAPTLVAFATPEGVQETPSVVNVQDVRSSSSATSVPKAIAPPQAAAPYVVASIPATRPPPVASSLLDRWREKDDEADEFAEVKPKSTATPTHVATIAHAATPSSAQKRKGPMLITPEIHAKMMSGVTSGAQSASALASTPTKAKDIPKTTLTDITPVAHAPVVPTPTVVTVAEASVAKSEQIRAKEAEGDNDSDWGMDDDAISPLSVVVAPSGQTPAGIAVPQESDADWDAEEEEVVVAVDKEGSIDAVGAKAVPFVGLGTDSDVPSIVGAPIVSAPPAAQLVGVSLGGQNDAVASTASPAPKGTVGIPLVRRLGTAAPKVEIMNDDEWDDIEMPAGGLHERSVREKNETAAETPAGYVPQVTRLVAKNTERHSTPTKVRGDAFENDDLEGLDVLGDSPLVLAERFGGGGSVRIAADERDEESDANFSDSDEDVSAGAVQADVKSLPTEVSTLPPSPIVTPIERPRRELSAYADDPDDMESGLEFDGELKLPLSLSLRHRAHLSVPASASHSDTSEAADWGSIDEFPSSDGGDEVASHRSSLSGKSPSMSASDAEEPEAFDDIEFPPEDTPFVPASVKRAEARRARRSTARRSRPRRLSDEPLRTSSPTGSDGGSAMEEKPVDLLNRTNDGDVDDDSDEFDDDDDDSESESTGRGNGEDDWGDVELPEGGAAALALRRRMSQGANAAPTVGRLGRGGLALPAFNVALRAVAGEDAHDYLSGLELPESSQSGNEMSGAEGESTPFRPVVREPSDGRELDGIDSMDEGRVASKLHGRSAIAQRAHKKPKKGPYLIKGMSPAATKVVGKMVFNPNTLVWEGNEAALRRFEKAITPARPALIRNIGGSDVPRAVGGMVFDPVRMCWVGNEEDLDAFADIDTVSYLSGADFEVGQEFALSDAVKEAMRRDAAATHDQIGAWILAGQGAGAGRGYLWRIRDGGLGVRCAL* # PASA_UPDATE: g14077.t1, single gene model update, valid-1, status:[pasa:asmbl_3949,status:3], valid-1 NODE_228_length_30426_cov_41.1889 . gene 10756 14835 . + . ID=g14077;Name=g14077.t1 NODE_228_length_30426_cov_41.1889 . mRNA 10756 14835 . + . ID=g14077.t1;Parent=g14077;Name=g14077.t1 NODE_228_length_30426_cov_41.1889 . five_prime_UTR 10756 10946 . + . ID=g14077.t1.utr5p1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 10756 11066 . + . ID=g14077.t1.exon1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 10947 11066 . + 0 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 11258 11473 . + . ID=g14077.t1.exon2;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 11258 11473 . + 0 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 11791 12372 . + . ID=g14077.t1.exon3;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 11791 12372 . + 0 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 12598 14100 . + . ID=g14077.t1.exon4;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 12598 14100 . + 0 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 14272 14405 . + . ID=g14077.t1.exon5;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 14272 14405 . + 0 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . exon 14588 14835 . + . ID=g14077.t1.exon6;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . CDS 14588 14696 . + 1 ID=cds.g14077.t1;Parent=g14077.t1 NODE_228_length_30426_cov_41.1889 . three_prime_UTR 14697 14835 . + . ID=g14077.t1.utr3p1;Parent=g14077.t1 #PROT g14077.t1 g14077 MDPDKQTAVGDVVDALKNKVDGEKPAEDNAFESLEKDFQEVLNELMVDKGLEKFRVEYEKLHRALKKSHESEKRLKQKCRELSAEIVANAAKVETAVKLSREDQNTIAQLKKEIEKAWKMVDASHEKEGRAKEAISQLKTEIANLSKMVEQGAGFSIGQEHNVNELLLLKEDLIKERDEQMATIVQLRKDITELMDRMQSIEGEKATAESEVSQLKDLIASKKSESDREQRKKEKLEREMKDNRQLLESKNNEIKTKQSQISKNQEEITRLEHQLREQKTLTEKALKDHDALNARTMKLQAEYEDQVLTTTQLASENQQKAAELKMKEEEIGELRNETGQVNKMREALQKKIKGLDEEKMEGKRQKDELKAKINALERDLDSLKRQGESDRKTIEDLVRERDILNKNLVKAAGSTDKQSSLVKIHEQQKKHLEQEISGYKDEAMKQRNLIYQLEKERDRYINEASEMTQRCLQAMEEVKIREMMIFDYKKKIAEAETKLKQQQNLYEAVRSDRNLYSKNLIESQDEITEMKRKLKIMNHQIDQLKEEISSKESALVKEHFEHLKVEKEKEGLVAEVNRIRHQNDVAQQYIQSQEAEEHKLRHIIQEADAERVRQKKELDQVINERDILGTQLIRRNDELALLYEKIKIQQSTLNKGERQYRERLEDIRVLKLEIKKIRREKTLLSKNVANVENLRREVYHLQRELLRERTRCKALEEELENPMNIHRWRKLEGSDPSTYEMIQKIQTLQKRLIAKTEEVVEKEMLIQEKEKMYVELKNILARQPGPEVAEQLSIYQQTLKDKTRQLKSMTSELNMYQSQVNEYKYEIERLSKELMDVKKKYFEQKRKERQTREREKAETHDGPNGSFPMPHRDQPRFAGGGFNLTAA* # ORIGINAL: g14078.t1 original gene structure, not modified by PASA NODE_228_length_30426_cov_41.1889 AUGUSTUS gene 15474 18531 . - . ID=g14078;Name=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS mRNA 15474 18531 . - . ID=g14078.t1;Parent=g14078;Name=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 18472 18531 . - . ID=g14078.t1.exon1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 18472 18531 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 18318 18355 . - . ID=g14078.t1.exon2;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 18318 18355 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 18022 18205 . - . ID=g14078.t1.exon3;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 18022 18205 . - 1 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 16798 17883 . - . ID=g14078.t1.exon4;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 16798 17883 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 16478 16624 . - . ID=g14078.t1.exon5;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 16478 16624 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 16251 16326 . - . ID=g14078.t1.exon6;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 16251 16326 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 15996 16090 . - . ID=g14078.t1.exon7;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 15996 16090 . - 2 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 15654 15881 . - . ID=g14078.t1.exon8;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 15654 15881 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 15474 15533 . - . ID=g14078.t1.exon9;Parent=g14078.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 15474 15533 . - 0 ID=cds.g14078.t1;Parent=g14078.t1 #PROT g14078.t1 g14078 MSSMLKAFAAIRPAASRVIKSQGVLSHARRSMATEAVKGSVIGIDLGTTNSCVAVMEGKTVKVIENAEGMRTTPSVVAFIEGGERLVGVPAKRQAVTNPKNTVYASKRLIGRRFEDAEVQKDIKMSSYEIVKGPNGDAWIKVRDKSYSPSQIGAFVLVKMKETAEGYLGQPAKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALSYGLDKGQDRVIAVYDLGGGTFDISILEIQKGVFEVKATNGDTFLGGEDFDNLLLEQLKNDFKKETNIDVSKDPLALQRLRDAAEKAKIELSSSVQTEINLPYLTADASGPKHLNTKLTRNRYEQLTAPLISRTVEPCKKCLKDAGLQRSDIQEVILVGGMTRMPKVQETVKDLFGREPSKAVNPDEAVAMGAAIQGGVMAGDVKDVLLLDVTPLSLGIETMGGVFTRLIPRNTTIPTKKSQVFSTAQDGQTQVEIKVCQGEREMASDNKTLGQFTLMGIPPAPRGVPQIEVIFDIDANGIVNVSAKDKGTGKEQNIVIQSSGGLNDKDIERMVREGEQYAEADKKRKDAIEAHNHAEAIIHDTEKAMNEFKDQIETDDVDKMSKEIKGLRDILANSKDGEEIRKAATAVQQASLKMFETIYKKRASENDNKSKDKDGEAKDV* # ORIGINAL: g14079.t1 original gene structure, not modified by PASA NODE_228_length_30426_cov_41.1889 AUGUSTUS gene 19205 24608 . - . ID=g14079;Name=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS mRNA 19205 24608 . - . ID=g14079.t1;Parent=g14079;Name=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 24535 24608 . - . ID=g14079.t1.exon1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 24535 24608 . - 0 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 24366 24445 . - . ID=g14079.t1.exon2;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 24366 24445 . - 1 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 24093 24265 . - . ID=g14079.t1.exon3;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 24093 24265 . - 2 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 23880 23950 . - . ID=g14079.t1.exon4;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 23880 23950 . - 0 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 23555 23629 . - . ID=g14079.t1.exon5;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 23555 23629 . - 1 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 23128 23251 . - . ID=g14079.t1.exon6;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 23128 23251 . - 1 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 22563 22968 . - . ID=g14079.t1.exon7;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 22563 22968 . - 0 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 22373 22434 . - . ID=g14079.t1.exon8;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 22373 22434 . - 2 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 21713 21867 . - . ID=g14079.t1.exon9;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 21713 21867 . - 0 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 20650 21500 . - . ID=g14079.t1.exon10;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 20650 21500 . - 1 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 20224 20401 . - . ID=g14079.t1.exon11;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 20224 20401 . - 2 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 19944 20095 . - . ID=g14079.t1.exon12;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 19944 20095 . - 1 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 19719 19829 . - . ID=g14079.t1.exon13;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 19719 19829 . - 2 ID=cds.g14079.t1;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 19205 19401 . - . ID=g14079.t1.exon14;Parent=g14079.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 19205 19401 . - 2 ID=cds.g14079.t1;Parent=g14079.t1 #PROT g14079.t1 g14079 MTVEALVEVRIALIDFCNIDLFERGFYQVRCRVRTSSGWAGTPRKDDEHVDNLDTALVHDESTFQTTAFVIPEDGTHASDTIFINFKMEDIRIDDEAVFDVRIPVQVENAMEKLREEYAIIEFELWFESNLKRFMFDYMYSCSLSFAVHSAIVGFDWSSAESSIPRGHADRRPSDATSKRRVLAHAFVKSLHKLHIKDSRSKYVVSDDRRSSRNDNALHAAHGECALDSSAIAESPPAVNGDATPSSLSLDNRDAPLSPSDHGVLTDTHIEHAILVFGSLSKLLVCALHTLGCVFARLVRDTDVSAPTSPAKCGSSGQADVRPMRGTIGCVYGEDCIAVISTIDRLRAVFSEEAKLREFWHHYCNALSRAGRPVKMLSRLHKERRRALLLEGFIPRVISHNGEEPTTSADTQLHRLRAVALDDVTTNTYESLEFPVIFIDTSRRKHHESPALKSATEERETRDAPVDAAAVAAVTRESTSLSDSAPNCPGAAHQSGSMLSSLICSGCGGASEVVDSIGRRYAVATEQPSAMAPCANVASVGVDAPPECSAELEEAARCRSDSAIEVSGNADAPVPREPTGVDVEVEGRRGRTGSTLSNSSDSGLGSSGGLMSIFGSSRRRTSSASSTASRKSAGHGDSAVHEGSPDHVSMPRRMSCLESAFALRALLAEGMDAAQSNGEGHMVVFVHGLAGNCHDLRVVKNRLLMELPNLQYFMSAANQYDTFADFEIMTDKLVAELLPVLEAKRPSKLSFVGHSLGNIVIRCALGRAELQPHLAHLHTFLSLAGPHLGTVSNGSTLVTTGMWVLQRWKHSMSLSQLGLSDASDPRKTFLYQLSQRPGPVYEEMRAALTATMAPCRVLRFDVVHSLDGRGVDKLIGRAAHVAMLDSDKFVQRLLAGTSGFFA* # ORIGINAL: g14075.t1 original gene structure, not modified by PASA NODE_228_length_30426_cov_41.1889 AUGUSTUS gene 1694 4227 . + . ID=g14075;Name=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS mRNA 1694 4227 . + . ID=g14075.t1;Parent=g14075;Name=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 1694 1858 . + . ID=g14075.t1.exon1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 1694 1858 . + 0 ID=cds.g14075.t1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 2019 2366 . + . ID=g14075.t1.exon2;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 2019 2366 . + 0 ID=cds.g14075.t1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 2576 2673 . + . ID=g14075.t1.exon3;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 2576 2673 . + 0 ID=cds.g14075.t1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 3063 3184 . + . ID=g14075.t1.exon4;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 3063 3184 . + 1 ID=cds.g14075.t1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 3490 3661 . + . ID=g14075.t1.exon5;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 3490 3661 . + 2 ID=cds.g14075.t1;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 3930 4227 . + . ID=g14075.t1.exon6;Parent=g14075.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 3930 4227 . + 1 ID=cds.g14075.t1;Parent=g14075.t1 #PROT g14075.t1 g14075 MLRATLPSRAAWRGWGAGDPLARRISAVPQSNTARRFSVDVANDAHGDGYVTGVEATIPTKESIILSGIQPTGAPTLGNYLGAMKNWTRQQHMADRVLFFIVDQHSITVPQDPAVLRANTTEMAIALLAVGINPSKSVVFQQSQVPHHAELMWVLACNTPTGWLHRMTQWKSKMDKSKPRSQGNLMLGLYAYPVLMAADILVYRATHVPVGDDQTQHLELARNLANTFNANYSTPFFPLPNAIYGEVPRVMSLRVPTSKMSKSDTADASRINLTDDNDVIRKKIKRAFTDSEPGVHYDPEKRPGVANLLRILAAIKTRSDVVVTPESIAAEFSTRNTSLAEFKDVVAEAVVGEIAPVRDEMARLRCDPAYIDGVLRAGGQVARGMAEATMQDVRRIIGFA* # ORIGINAL: g14074.t1 original gene structure, not modified by PASA NODE_228_length_30426_cov_41.1889 AUGUSTUS gene 205 1365 . - . ID=g14074;Name=g14074.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS mRNA 205 1365 . - . ID=g14074.t1;Parent=g14074;Name=g14074.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 205 1365 . - . ID=g14074.t1.exon1;Parent=g14074.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 205 1365 . - 0 ID=cds.g14074.t1;Parent=g14074.t1 #PROT g14074.t1 g14074 MPPPYVCDACVAPPLSCRRADRPPTAKHKRNINSGCEEKASAHSHVAVVLFGARSVRNHSRNPATDACFESGVFDSVLMCDLPHVHVFGVDGAINECSCAWPNTPVNRIESPVVPGVIAVKMVRDAILPFVCDASVESVTLIGYSMGAIFIANAWASLSDAEAIAFPGKPSRITANLVACGLSVSPRRLNRISRFFVRDEQRWHPSYALHGKGIDAVLRCTRAWLGAGADTLHDDTGCIAEDACAANDNPQSLMMDDVARRAMLTRDSRLHFICGADDSVYQPTDIWVAPHHTPPQPTSHLVVHPATTLLREKGAYVRGGCSLRSPHDTDAGAHLHMVSGDHFTLAGPCWPLVKETLFRIWRVGPDGSHCGDAETACSCHRASSKL* # ORIGINAL: g14076.t1 original gene structure, not modified by PASA NODE_228_length_30426_cov_41.1889 AUGUSTUS gene 5231 8919 . - . ID=g14076;Name=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS mRNA 5231 8919 . - . ID=g14076.t1;Parent=g14076;Name=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 8854 8919 . - . ID=g14076.t1.exon1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 8854 8919 . - 0 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 8543 8638 . - . ID=g14076.t1.exon2;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 8543 8638 . - 0 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 8351 8408 . - . ID=g14076.t1.exon3;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 8351 8408 . - 0 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 7736 8218 . - . ID=g14076.t1.exon4;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 7736 8218 . - 2 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 7225 7323 . - . ID=g14076.t1.exon5;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 7225 7323 . - 2 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 6875 6978 . - . ID=g14076.t1.exon6;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 6875 6978 . - 2 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 5999 6511 . - . ID=g14076.t1.exon7;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 5999 6511 . - 0 ID=cds.g14076.t1;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS exon 5231 5791 . - . ID=g14076.t1.exon8;Parent=g14076.t1 NODE_228_length_30426_cov_41.1889 AUGUSTUS CDS 5231 5791 . - 0 ID=cds.g14076.t1;Parent=g14076.t1 #PROT g14076.t1 g14076 MSEGTASAVETWVVKQRKLLELERDEELNEGAARRDTVSTVDLQKRGVCLVKLSVASQRTGLGGRCLVDLELAGGDADAKLPSHRFRPGDIVTIEPYTRGTKAGATAEQDAKQKQQSATVARCTESKITISLDDDMPDELLDVTLRMDRVANDVTHKRVMQTMDDLASHGYKTGPSARIASVVFGKEEPMFDDPPASVAEKEWANLGLNKSQKDAVRFALSARDVAVIHGPPGTGKTTTVIEIIQQLIKRGGDTVRILACGPSNISVDNMVERLASTKTCIVRLGHPARLLPSVLKHALDAVVKTAEGADLVEDIRREMDVAQRDLGRTKDWGERRRLRGALKDLRKELSKREHKALDNAINGAQVVLCTITGAASKVLGRSQFDYVVIDEAPQALEAHCWIAMLRGKRVIIAGDHCQLPPTILSDKAARGGLSETLFDRIHGAHKTKATRMLETQYRMNEKIMDWSSKEMYEGRLKADPKVASHVLCELPGVKKTEETSCALFMIDSAGCNMHESESADDESKSNDGEADVTAAYVRRLLAAGVKPGDIAIITPYNAQVTLLKQRLADVGEALEIGSVDGFQGREKEAVVISMVRSNDDGEVGFLKEDRRMNVAVTRGRRHVCIVGDSGTLCSHEFLDRLVGHFMEHGEVRSAEEFVQ* # ORIGINAL: g6356.t1 original gene structure, not modified by PASA NODE_2323_length_6731_cov_37.9078 AUGUSTUS gene 161 1998 . - . ID=g6356;Name=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS mRNA 161 1998 . - . ID=g6356.t1;Parent=g6356;Name=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS exon 1945 1998 . - . ID=g6356.t1.exon1;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS CDS 1945 1998 . - 0 ID=cds.g6356.t1;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS exon 1389 1543 . - . ID=g6356.t1.exon2;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS CDS 1389 1543 . - 0 ID=cds.g6356.t1;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS exon 925 1033 . - . ID=g6356.t1.exon3;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS CDS 925 1033 . - 1 ID=cds.g6356.t1;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS exon 604 710 . - . ID=g6356.t1.exon4;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS CDS 604 710 . - 0 ID=cds.g6356.t1;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS exon 161 335 . - . ID=g6356.t1.exon5;Parent=g6356.t1 NODE_2323_length_6731_cov_37.9078 AUGUSTUS CDS 161 335 . - 1 ID=cds.g6356.t1;Parent=g6356.t1 #PROT g6356.t1 g6356 MQPSNFEVSKLNRKGYVQSRILQIDYEERTLKNLKKGKVQKQFSFADVVSQQKDAKHNTKFFIFFKNRRPYELFASTSNDRDELFNKIQHIINSEKDFNDFLMKRRDTEIKVIKSGPTYKKGKIHWAKRRLVLLDGLLSVYRSDKSEEEEGHPLNVINLKEVSASRKGTHFLAIRTKLRPFEFRFDEQVRTVHVTALPL* # ORIGINAL: g4560.t1 original gene structure, not modified by PASA NODE_3118_length_4261_cov_39.016 AUGUSTUS gene 498 1737 . - . ID=g4560;Name=g4560.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS mRNA 498 1737 . - . ID=g4560.t1;Parent=g4560;Name=g4560.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS exon 915 1737 . - . ID=g4560.t1.exon1;Parent=g4560.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS CDS 915 1737 . - 0 ID=cds.g4560.t1;Parent=g4560.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS exon 498 604 . - . ID=g4560.t1.exon2;Parent=g4560.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS CDS 498 604 . - 2 ID=cds.g4560.t1;Parent=g4560.t1 #PROT g4560.t1 g4560 MRLSPVTIGTSHVRFFHHGTAAAARQKGGRSAVPNAVALPTQPQPNASSVVSSDVTEVNEKTNTRVPESAPNTWSATNLVSEGITPETGPLKAASTGVSEEIRNDLMQFAERLRAALADGATVDQLADALPSPISVLSPVLQTDEKSVAPRSPHDIERHRRFRLFQTSRPVVDKRNVMLHAGKGGQGRTGGPGGDGASIYAEAVPRCATLRELRGSYRGDKGAPSQHLATRGKPAARLTVEVPLGTVVFDAATKEVIADLDTKGAKALLAKGGRGGGAQTAASFYAGEKGESRRVIFELKSIAHVGLVG* # ORIGINAL: g4561.t1 original gene structure, not modified by PASA NODE_3118_length_4261_cov_39.016 AUGUSTUS gene 2397 3050 . + . ID=g4561;Name=g4561.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS mRNA 2397 3050 . + . ID=g4561.t1;Parent=g4561;Name=g4561.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS exon 2397 3050 . + . ID=g4561.t1.exon1;Parent=g4561.t1 NODE_3118_length_4261_cov_39.016 AUGUSTUS CDS 2397 3050 . + 0 ID=cds.g4561.t1;Parent=g4561.t1 #PROT g4561.t1 g4561 MNWRYSVTVGAHAEPHHVVRVWEDVERWCMWDRDVESSSALRGISPGSNLTLRLRSTGKDHSTTLRAVMDAVASGARASAYIAPLPAEAMRGAGSPLRKKQSAVASFCYEIPISLATLRLSFSVYAARRPDGGDTGASDTASSGTGDEKDEAGCIITHTIEIDGILAYAHGTARGMSLRDRCDSSAAAVARLAERLCAGAPEAFEIVVDDDSVRKPS* # ORIGINAL: g2153.t1 original gene structure, not modified by PASA NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS gene 175 1461 . - . ID=g2153;Name=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS mRNA 175 1461 . - . ID=g2153.t1;Parent=g2153;Name=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS exon 1396 1461 . - . ID=g2153.t1.exon1;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS CDS 1396 1461 . - 0 ID=cds.g2153.t1;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS exon 1204 1257 . - . ID=g2153.t1.exon2;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS CDS 1204 1257 . - 0 ID=cds.g2153.t1;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS exon 532 702 . - . ID=g2153.t1.exon3;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS CDS 532 702 . - 0 ID=cds.g2153.t1;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS exon 175 312 . - . ID=g2153.t1.exon4;Parent=g2153.t1 NODE_4111_length_2174_cov_27.8339_potentialcontaminant AUGUSTUS CDS 175 312 . - 0 ID=cds.g2153.t1;Parent=g2153.t1 #PROT g2153.t1 g2153 MASSLGLMALAAMCVIAGALGGTPEFDPVANPKAIVAANKARFTVLTEHIVRAEWSSSGVFRDAATYAVTRRNLPVPAFNVSEDADGWISIQTASVEVRYLTASTESFSAANLAVTVTLGNGETTKWDPSQSRFPGNLQGTIR # PASA_UPDATE: g4116.t1, single gene model update, valid-1, status:[pasa:asmbl_4233,status:13],[pasa:asmbl_4235,status:12], valid-1 NODE_2404_length_6404_cov_38.0638 . gene 4195 6089 . - . ID=g4116;Name=g4116.t1 NODE_2404_length_6404_cov_38.0638 . mRNA 4195 6089 . - . ID=g4116.t1;Parent=g4116;Name=g4116.t1 NODE_2404_length_6404_cov_38.0638 . five_prime_UTR 5995 6089 . - . ID=g4116.t1.utr5p1;Parent=g4116.t1 NODE_2404_length_6404_cov_38.0638 . exon 5865 6089 . - . ID=g4116.t1.exon1;Parent=g4116.t1 NODE_2404_length_6404_cov_38.0638 . CDS 5865 5994 . - 0 ID=cds.g4116.t1;Parent=g4116.t1 NODE_2404_length_6404_cov_38.0638 . exon 4195 5579 . - . ID=g4116.t1.exon2;Parent=g4116.t1 NODE_2404_length_6404_cov_38.0638 . CDS 4879 5579 . - 2 ID=cds.g4116.t1;Parent=g4116.t1 NODE_2404_length_6404_cov_38.0638 . three_prime_UTR 4195 4878 . - . ID=g4116.t1.utr3p1;Parent=g4116.t1 #PROT g4116.t1 g4116 MIASTKGISDRFSAETEGPISVRIGVHAGPCLAAVVGGRTRFKYDVWGPCLDTATMLEQTGQPGFIHISAEAARYLETVDVDIAVPLPFDLKNAVKRSILIDGVAVETLLIEPIVAAKSAVHSNTGSSATLGGGLSVADLFASLAHRSARPSDTKSMTPQGSFHRGDSFTSRITAVEEITSSNGSMTSAPRSFARKLSEAAATVRGTLTRNPDFGSTGSFGGGGLSALSRLRKSSRQSSSTLADIGGMQRRVVVGADGVETVLMELEHPMEEDEFE* # ORIGINAL: g4115.t1 original gene structure, not modified by PASA NODE_2404_length_6404_cov_38.0638 AUGUSTUS gene 2921 3773 . + . ID=g4115;Name=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS mRNA 2921 3773 . + . ID=g4115.t1;Parent=g4115;Name=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS exon 2921 2923 . + . ID=g4115.t1.exon1;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS CDS 2921 2923 . + 0 ID=cds.g4115.t1;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS exon 3137 3230 . + . ID=g4115.t1.exon2;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS CDS 3137 3230 . + 0 ID=cds.g4115.t1;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS exon 3400 3520 . + . ID=g4115.t1.exon3;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS CDS 3400 3520 . + 2 ID=cds.g4115.t1;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS exon 3680 3773 . + . ID=g4115.t1.exon4;Parent=g4115.t1 NODE_2404_length_6404_cov_38.0638 AUGUSTUS CDS 3680 3773 . + 1 ID=cds.g4115.t1;Parent=g4115.t1 #PROT g4115.t1 g4115 MPSSHTIVLVQPTRLLTSRTFSDYETVSQAMEGIVHMYEAHLKDVYPNRRNITYDISELFQYIDKLADLSCLVFTPNINAYAPFNKDWIKDKIVTMLKRQAQQ* # PASA_UPDATE: g4114.t1, single gene model update, valid-1, status:[pasa:asmbl_4234,status:12], valid-1 NODE_2404_length_6404_cov_38.0638 . gene 127 2246 . - . ID=g4114;Name=g4114.t1 NODE_2404_length_6404_cov_38.0638 . mRNA 127 2246 . - . ID=g4114.t1;Parent=g4114;Name=g4114.t1 NODE_2404_length_6404_cov_38.0638 . five_prime_UTR 2050 2246 . - . ID=g4114.t1.utr5p1;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . exon 1947 2246 . - . ID=g4114.t1.exon1;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . CDS 1947 2049 . - 0 ID=cds.g4114.t1;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . exon 1489 1566 . - . ID=g4114.t1.exon2;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . CDS 1489 1566 . - 2 ID=cds.g4114.t1;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . exon 563 1252 . - . ID=g4114.t1.exon3;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . CDS 563 1252 . - 2 ID=cds.g4114.t1;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . exon 127 271 . - . ID=g4114.t1.exon4;Parent=g4114.t1 NODE_2404_length_6404_cov_38.0638 . CDS 127 271 . - 2 ID=cds.g4114.t1;Parent=g4114.t1;3_prime_partial=true #PROT g4114.t1 g4114 MPVLRKGAVVKLAVVALFLFALHLAFTTQVKTTAGDKSHGQDGHNHAHAHPPAPHAGGNAVAARAGDAAVLKPLDEELAVEEAEEEPVEVPGGGAGDNTQDDVDGSQSGGVADEQQNLDEEGVTAEDSAEDGGAAAEGETAGVTESDARDATDSAADGAAAAVANGGNVDPNVPEDGEIGNGGREDGTESAAEGDGGAAAEGPVGGEYAEVGSKDAPVEKSEHSETDDHAHDTHADDGSDGARDDTAPVMPNVPASDDGHAGHKHEEETENVGQQLPRGSVNRHVYGDVCGNTVDAGRKNVKFPKSPDRRDLVQSLESKLGFDNYFCRLFGFIHPPAS # ORIGINAL: g12476.t1 original gene structure, not modified by PASA NODE_3198_length_4037_cov_116.022 AUGUSTUS gene 1705 3267 . + . ID=g12476;Name=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS mRNA 1705 3267 . + . ID=g12476.t1;Parent=g12476;Name=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS exon 1705 1828 . + . ID=g12476.t1.exon1;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS CDS 1705 1828 . + 0 ID=cds.g12476.t1;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS exon 2238 2325 . + . ID=g12476.t1.exon2;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS CDS 2238 2325 . + 2 ID=cds.g12476.t1;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS exon 2672 2834 . + . ID=g12476.t1.exon3;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS CDS 2672 2834 . + 1 ID=cds.g12476.t1;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS exon 3082 3267 . + . ID=g12476.t1.exon4;Parent=g12476.t1 NODE_3198_length_4037_cov_116.022 AUGUSTUS CDS 3082 3267 . + 0 ID=cds.g12476.t1;Parent=g12476.t1 #PROT g12476.t1 g12476 MAEIVSRIAAIPRGLVDYYMKMLKEHPVLTKAVTSAIVAALGDIISQRRAIAADPTEEFNPRSTFAFFAFGLSCTGPITHAFYNWLDRAVPQGKQGAVVMRMVIERLVFAPLFLGLFFVVTSILQGHSMQQIGVRLYLTYWGALKMNWRVWSVAQYINLNYVPRHLRVLFANCIALGWNVYLASKK* # PASA_UPDATE: g2979.t1, single gene model update, valid-1, status:[pasa:asmbl_7964,status:12], valid-1 NODE_5257_length_945_cov_65.9517_potentialcontaminant . gene 1 858 . - . ID=g2979;Name=g2979.t1 NODE_5257_length_945_cov_65.9517_potentialcontaminant . mRNA 1 858 . - . ID=g2979.t1;Parent=g2979;Name=g2979.t1 NODE_5257_length_945_cov_65.9517_potentialcontaminant . five_prime_UTR 760 858 . - . ID=g2979.t1.utr5p1;Parent=g2979.t1 NODE_5257_length_945_cov_65.9517_potentialcontaminant . exon 1 858 . - . ID=g2979.t1.exon1;Parent=g2979.t1 NODE_5257_length_945_cov_65.9517_potentialcontaminant . CDS 1 759 . - 0 ID=cds.g2979.t1;Parent=g2979.t1;3_prime_partial=true #PROT g2979.t1 g2979 MSDVVAVGFNLLAPETVVHHIVPYLSNVDVSSLAKVNRALHVHLRQKRLYHLWPLYNRKYIEDATFREELKATIPVGRLVLDGCDRGEPNPQLEAFAGVYSASIDCTPVSDMAPLRDVRELVVRPFCLDVSLFVNLQRLVVHSGSIVNAALLSRVPVIELTSVTLDSLEFVNVTRVKLVNCGWPGHIDITDISGLRNVRFVTLERMESLVDVSPLANAIEVTIEKCDSVSRESLLTLGGVKKLFYRPSRTTYD # PASA_UPDATE: g1716.t1, single gene model update, valid-1, status:[pasa:asmbl_5811,status:12], valid-1 NODE_3271_length_3863_cov_36.1951 . gene 173 3747 . - . ID=g1716;Name=g1716.t1 NODE_3271_length_3863_cov_36.1951 . mRNA 173 3747 . - . ID=g1716.t1;Parent=g1716;Name=g1716.t1 NODE_3271_length_3863_cov_36.1951 . five_prime_UTR 3696 3747 . - . ID=g1716.t1.utr5p1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 3587 3747 . - . ID=g1716.t1.exon1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 3587 3695 . - 0 ID=cds.g1716.t1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 2095 3134 . - . ID=g1716.t1.exon2;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 2095 3134 . - 2 ID=cds.g1716.t1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 1424 1768 . - . ID=g1716.t1.exon3;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 1424 1768 . - 0 ID=cds.g1716.t1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 1043 1252 . - . ID=g1716.t1.exon4;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 1043 1252 . - 0 ID=cds.g1716.t1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 545 752 . - . ID=g1716.t1.exon5;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 545 752 . - 0 ID=cds.g1716.t1;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . exon 173 287 . - . ID=g1716.t1.exon6;Parent=g1716.t1 NODE_3271_length_3863_cov_36.1951 . CDS 173 287 . - 2 ID=cds.g1716.t1;Parent=g1716.t1;3_prime_partial=true #PROT g1716.t1 g1716 MATAYLSVASRRMLGANVRPIVTRRFASAVAAAPAKADHGKHVSVTVNGDGVAIVRFDSPNSKVNTLSREVNSEFESILDKITGDESIKSVVLISGKKDSFIAGADITMLSECKTKEEIKSLSSSGQQMLNRLSQTKPVVAAIHGSCMGGGLEVALACTFRIATAHPKTVLALPEVQLGLLPGAGGTQRLPRLVDLPDALDMMLTGKQIRADKARKMGLVDLVIDQIGLSTETGEANTARYLEDAAVKTAKRLADGSLKVNRGKPLTTVAGLKRWLLTDFSYGRDFVINQARKTVLKKTYGNYPAPLAIIDVVNTGLAEGFEAGLAKEADKFGDLGMTNQSKALMSIFFGQQDCKKNRFGLPARPTQNIAVLGAGLMGAGIAEVSITKNYNAILKDATNDGAARGLKQIYTNLNKRVKRKALSAFERDQILARLSPQIDYAGFGKADMIIEAVFEDLALKQRIVKEVEAVIPDHCIFASNTSALPISEIFKHSKRPEKTIGMHYFSPVDKMPLLEIITSDKTSKDTAAAAVEVGLKQGKTVIVVKDGPGFYTTRILAPTLAEAITLLLEGVEFERLDRAMKKFGFPVGSVTLADEVGLDVAYHVAHDLGNAFKDRMGGKGAENGILAMKELVDRGFKGRKSGRGCYIYEAKGKNREVNPEAVEIFKKYAIGNKHV # PASA_UPDATE: g2912.t1, single gene model update, valid-1, status:[pasa:asmbl_7939,status:12], valid-1 NODE_5216_length_966_cov_95.743_potentialcontaminant . gene 1 966 . + . ID=g2912;Name=g2912.t1 NODE_5216_length_966_cov_95.743_potentialcontaminant . mRNA 1 966 . + . ID=g2912.t1;Parent=g2912;Name=g2912.t1 NODE_5216_length_966_cov_95.743_potentialcontaminant . exon 1 966 . + . ID=g2912.t1.exon1;Parent=g2912.t1 NODE_5216_length_966_cov_95.743_potentialcontaminant . CDS 1 966 . + 0 ID=cds.g2912.t1;Parent=g2912.t1;5_prime_partial=true;3_prime_partial=true #PROT g2912.t1 g2912 AADNGDNEKDGCELEDKRSRTPGLAWNVGRMPARAKLVVAAYMLGTLATIVKTFAWWLNQYPFMRNMHFFGRWALSALVAGMEYLPLTQAFQLSSRNGIHLGLLTAYMEAADNTFRMCQQAGLGFNVEWFDVVTALGLIACVCFQGFMHYRDSEQNHDPCPAPSEVEDGNVKTDTAAVVDTNLDTKPTVSEHSADDSAAPKGDKRPLIGALIAVVIVVTIPAIFGGVTGRAYALGTAATAAKTFAWWVNQYPALHGLSFIKKWLAGWSIAALVEYLPLIGAMSVAHSGNVHIGLLTAYMEATDNFFRMCQQRLLRKPISWYD # PASA_UPDATE: g13803.t1, single gene model update, valid-1, status:[pasa:asmbl_5764,status:12],[pasa:asmbl_5765,status:12], valid-1 NODE_3244_length_3924_cov_37.6064 . gene 1443 3851 . - . ID=g13803;Name=g13803.t1 NODE_3244_length_3924_cov_37.6064 . mRNA 1443 3851 . - . ID=g13803.t1;Parent=g13803;Name=g13803.t1 NODE_3244_length_3924_cov_37.6064 . exon 2949 3851 . - . ID=g13803.t1.exon1;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . CDS 2949 3851 . - 0 ID=cds.g13803.t1;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . exon 2522 2621 . - . ID=g13803.t1.exon2;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . CDS 2522 2621 . - 0 ID=cds.g13803.t1;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . exon 2149 2247 . - . ID=g13803.t1.exon3;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . CDS 2149 2247 . - 2 ID=cds.g13803.t1;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . exon 1443 1870 . - . ID=g13803.t1.exon4;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . CDS 1662 1870 . - 2 ID=cds.g13803.t1;Parent=g13803.t1 NODE_3244_length_3924_cov_37.6064 . three_prime_UTR 1443 1661 . - . ID=g13803.t1.utr3p1;Parent=g13803.t1 #PROT g13803.t1 g13803 MPMKSTLSGGKTFCGYSRGAEPPPPPQERSARPPPAPYSQRANPPLRPAPTASSSTSSASSGAAVQAAKPSMLKKAAASAPVYREGDKGGSLNTCDNLMSCIRLGGKLMNAVGGASRKNDCKEEEEEEDVAMGMSLFYDDLFDAKRTKASHDIKNSVDHARFDGFSYCPQPAAPPDIMIASEAVMDQLMGHLSARRASVRGGDECTEEINEEIDEWSDDDARKTNGAGYEEGIDDGWSGMDSASSGLRSTGLAIARPRKANISRDVLFISGDESDGAALPDRALRSITACDLEAILSKQRPNGSFDLSFYTTASICHLHNELEKALVASGIASLGKTAMTLIRAMIHTAIVMYLAHNHVFERCTDIGDFLDAAVNHVKSSATRADFADMYLKAATFVRTSDREMPSLPDRLGLGLNWCSACEQLLQLCGYDKDIDC* # ORIGINAL: g13802.t1 original gene structure, not modified by PASA NODE_3244_length_3924_cov_37.6064 AUGUSTUS gene 172 1336 . + . ID=g13802;Name=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS mRNA 172 1336 . + . ID=g13802.t1;Parent=g13802;Name=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS exon 172 339 . + . ID=g13802.t1.exon1;Parent=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS CDS 172 339 . + 0 ID=cds.g13802.t1;Parent=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS exon 556 756 . + . ID=g13802.t1.exon2;Parent=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS CDS 556 756 . + 0 ID=cds.g13802.t1;Parent=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS exon 1076 1336 . + . ID=g13802.t1.exon3;Parent=g13802.t1 NODE_3244_length_3924_cov_37.6064 AUGUSTUS CDS 1076 1336 . + 0 ID=cds.g13802.t1;Parent=g13802.t1 #PROT g13802.t1 g13802 VVAVPHFKDVIIMAVTCDACGHKSNEVKASGEINAKGQMIRLNIKDSDDLSRDVLKSDTARLMLPDLGLDMEPGSLGSRFTTVEGLLTYLKEELVSANPFVVGDSSAPGQKTRMDDFLLKLDQIIEGTRPTLFIIDDPAGNSHIQNLYAPDPDPSLTIEEYVRTEEQNEELGLTHMVTEGYEHTDTHDDSHAHADGAKEATAETSPAEK* # ORIGINAL: g13746.t1 original gene structure, not modified by PASA NODE_1874_length_8778_cov_35.6869 AUGUSTUS gene 8445 8672 . - . ID=g13746;Name=g13746.t1 NODE_1874_length_8778_cov_35.6869 AUGUSTUS mRNA 8445 8672 . - . ID=g13746.t1;Parent=g13746;Name=g13746.t1 NODE_1874_length_8778_cov_35.6869 AUGUSTUS exon 8445 8672 . - . ID=g13746.t1.exon1;Parent=g13746.t1 NODE_1874_length_8778_cov_35.6869 AUGUSTUS CDS 8445 8672 . - 0 ID=cds.g13746.t1;Parent=g13746.t1 #PROT g13746.t1 g13746 AIEPLTEKQLKKAERLRVAKYRELGERIDREEKLSKVKGHMELQKQLMGKGKRMKIKDGDKTSAPIYKWAHERKK* # PASA_UPDATE: g13745.t1, single gene model update, valid-1, status:[pasa:asmbl_2867,status:3], valid-1 NODE_1874_length_8778_cov_35.6869 . gene 6077 7974 . + . ID=g13745;Name=g13745.t1 NODE_1874_length_8778_cov_35.6869 . mRNA 6077 7974 . + . ID=g13745.t1;Parent=g13745;Name=g13745.t1 NODE_1874_length_8778_cov_35.6869 . five_prime_UTR 6077 6218 . + . ID=g13745.t1.utr5p1;Parent=g13745.t1 NODE_1874_length_8778_cov_35.6869 . exon 6077 7974 . + . ID=g13745.t1.exon1;Parent=g13745.t1 NODE_1874_length_8778_cov_35.6869 . CDS 6219 7760 . + 0 ID=cds.g13745.t1;Parent=g13745.t1 NODE_1874_length_8778_cov_35.6869 . three_prime_UTR 7761 7974 . + . ID=g13745.t1.utr3p1;Parent=g13745.t1 #PROT g13745.t1 g13745 MEIRAHAGHGRAAFAVRDYAIGDVVHAETSPLMVWSTSGDKELNIVRAFVELSASSRSTIRSHFCAIESGHPLHSDLERVASRISGVSIPVAHDNKNAKKDAESISDSTRPPAEKDDILGILCIAAANAHRIGNNCSALFPTAAMASHSCVPNMRLLPHPETALGMRYAAIRAIKAGELLTYSYVAPNVLILPTNNRREMLYRSWGFVCECEGCAGQYDASRTIKCPSGHSSMRPPNASAANWLTMFNSGTLSRDGGATSAAVWFCAECGRGQRIPSQFPPLESTLCGLASSVNAGQRMVPRDEMMQAAGLAQRALGPRHWACALLSMLVAEGDIYAVAHPDECRVTSPQQRASLMASALTHLDAFLVHVTERGLFWAAGIEFAAKFARQLAETVEQGSSLPPSPADSASASASAVAVAVAGSSSLHVDPCVLAAIARFLPLRGLGCDIADGHRLSRALDDLKWKCCACGCAISGEISSRSACGGCKTAAFCGVACMKAAWPRHKRFCKGAIL* # PASA_UPDATE: g13744.t1, single gene model update, valid-1, status:[pasa:asmbl_2864,status:12],[pasa:asmbl_2865,status:12],[pasa:asmbl_2866,status:12], valid-1 NODE_1874_length_8778_cov_35.6869 . gene 34 5785 . - . ID=g13744;Name=g13744.t1 NODE_1874_length_8778_cov_35.6869 . mRNA 34 5785 . - . ID=g13744.t1;Parent=g13744;Name=g13744.t1 NODE_1874_length_8778_cov_35.6869 . five_prime_UTR 5571 5785 . - . ID=g13744.t1.utr5p1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . five_prime_UTR 5316 5332 . - . ID=g13744.t1.utr5p2;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 5571 5785 . - . ID=g13744.t1.exon1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 5186 5332 . - . ID=g13744.t1.exon2;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 5186 5315 . - 0 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 4903 4957 . - . ID=g13744.t1.exon3;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 4903 4957 . - 2 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 4273 4568 . - . ID=g13744.t1.exon4;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 4273 4568 . - 1 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 3888 4073 . - . ID=g13744.t1.exon5;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 3888 4073 . - 2 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 3578 3703 . - . ID=g13744.t1.exon6;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 3578 3703 . - 2 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 2975 3377 . - . ID=g13744.t1.exon7;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 2975 3377 . - 2 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 2446 2670 . - . ID=g13744.t1.exon8;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 2446 2670 . - 1 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 2011 2232 . - . ID=g13744.t1.exon9;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 2011 2232 . - 1 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 1602 1820 . - . ID=g13744.t1.exon10;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 1602 1820 . - 1 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 1046 1253 . - . ID=g13744.t1.exon11;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 1046 1253 . - 1 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 743 883 . - . ID=g13744.t1.exon12;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 743 883 . - 0 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 441 605 . - . ID=g13744.t1.exon13;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 441 605 . - 0 ID=cds.g13744.t1;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . exon 34 62 . - . ID=g13744.t1.exon14;Parent=g13744.t1 NODE_1874_length_8778_cov_35.6869 . CDS 34 62 . - 0 ID=cds.g13744.t1;Parent=g13744.t1;3_prime_partial=true #PROT g13744.t1 g13744 MRRFATPLQSTVGQPYRRTRPSPASAWSVIFNRGSHTQQRKNGSNVFVSIGRGLVATAGAFGVAVVASYLSRRLFGGTIVDGPFSTRANESHHPTGNDATWSANDVRLDDSGIMLGGSIRRHLSGERVIEEDGEGEKTEKGGEEGSSRDGRSGRNASAEPDDSVFSDATSRDAVGAYPDGRASVARERQLGIELLWKLSVLPFEDKAGKLRSLMAVARGSREAEVAEVMFCAGALDILLPVLRGDDSLLRELAIYTLGQLSAAPSARRMVDKFAQYLDSATLVALARVKETNKALFRLRQTTSDTPAPVTSGASAVTSPAPLHPPPDARDVAGDPPSAAAGHESACMDAPPYPEPDAFRALLIVCDTEGDPCLRHFMSLALFKIVSGQIAKNAAKKEGEFRFLATPEDAISVVASPAPEKNVKLPKGAFVTYCLKALGRLSLLSQNQTALVHAGALETLLAVAQQHKADLMELRDVARIIANLSSNPTLWVAMVTSGWLAQLRDWTHESADVALEGHATRALANLDHVANGMPDYYPDGVFLLHPEARVLPESESEQRVLACVKSGRRDCASALRPSMDVIFVHGLLGGPFFTFRQEPLSAGSNKWRSRANGTKQTMCWPKYWLGRDEPSVRVLSLEYDSYLSEWRPVCPHVTEEAERRSMVTRSTELLAKLKEANVGRDRPVVWVTHSMGGLLVKQMLCDAEDNREDYADILDSTIGVVFYSVPHFGSHLAETAAKARFVMFPSVEVRELRMWSPYLIALNDRFSTFKNISVLSFGETRKMQVLSHAYKTLVVPMESSNP # ORIGINAL: g12690.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 27916 30588 . + . ID=g12690;Name=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 27916 30588 . + . ID=g12690.t1;Parent=g12690;Name=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 27916 28041 . + . ID=g12690.t1.exon1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 27916 28041 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 28383 28450 . + . ID=g12690.t1.exon2;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 28383 28450 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 28564 28639 . + . ID=g12690.t1.exon3;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 28564 28639 . + 1 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 28759 28884 . + . ID=g12690.t1.exon4;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 28759 28884 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 28978 29124 . + . ID=g12690.t1.exon5;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 28978 29124 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 29360 29466 . + . ID=g12690.t1.exon6;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 29360 29466 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 29591 29894 . + . ID=g12690.t1.exon7;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 29591 29894 . + 1 ID=cds.g12690.t1;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 30118 30588 . + . ID=g12690.t1.exon8;Parent=g12690.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 30118 30588 . + 0 ID=cds.g12690.t1;Parent=g12690.t1 #PROT g12690.t1 g12690 MSKIKRADSMGSDDDSYMDDEDTTDDDYGIDMDLDDGQQAKDIPPATARILLQHFGWDKERLIERYYDGDQDKLFDEARIVNPNKNPAKQVSADKQICCEICYTDYLVKDTAGLPCGHAFCKSCWNAYLTNKIMDEGKGENISCPAHGCDILVDEFTVTSLIQEQRVLNKYQYLIAKAFVQGNKHVKWCPSPGCENAVKVPVIEAKPVKCLCGNVFCFRCSCPLHEPVRCDMLARWMKKCADDSETANWISANTKECPKCRSIIEKNGGCNHMVCRSVACKYEFCWVCLGEWGPHGSSWYNCNRFNETDSMGARENQAKSRASLDRYLHFYNRFANHDQSQKLEKVLDQKIEKKMEDMQHRNMSWIEVQYLKRAVEILNQCRGTLKHTYVFGYYLVKNNQAVIFEDNQKDLEMATEELSGFLEGDINADSLVDLKQKVLDKSQYCESRRKVLLDHVAHGYNDDIWEFMTGEEVK* # PASA_UPDATE: g12684.t1, single gene model update, valid-1, status:[pasa:asmbl_3890,status:3], valid-1 NODE_225_length_30642_cov_42.0876 . gene 1090 3842 . - . ID=g12684;Name=g12684.t1 NODE_225_length_30642_cov_42.0876 . mRNA 1090 3842 . - . ID=g12684.t1;Parent=g12684;Name=g12684.t1 NODE_225_length_30642_cov_42.0876 . five_prime_UTR 3770 3842 . - . ID=g12684.t1.utr5p1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 3611 3842 . - . ID=g12684.t1.exon1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 3611 3769 . - 0 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 3219 3337 . - . ID=g12684.t1.exon2;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 3219 3337 . - 0 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 2677 2968 . - . ID=g12684.t1.exon3;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 2677 2968 . - 1 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 2382 2458 . - . ID=g12684.t1.exon4;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 2382 2458 . - 0 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 1863 2048 . - . ID=g12684.t1.exon5;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 1863 2048 . - 1 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 1558 1671 . - . ID=g12684.t1.exon6;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 1558 1671 . - 1 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . exon 1090 1335 . - . ID=g12684.t1.exon7;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . CDS 1215 1335 . - 1 ID=cds.g12684.t1;Parent=g12684.t1 NODE_225_length_30642_cov_42.0876 . three_prime_UTR 1090 1214 . - . ID=g12684.t1.utr3p1;Parent=g12684.t1 #PROT g12684.t1 g12684 MWGYRCEFVDSTVVDQFEAALQTKLEIMGGFNTSAANVLYKVFGEFDLSRSGKTDLVEFEHALERLNFLNKKREIKALFRRYDIDNDGIIDYRDMGLSLTRDSPSRSIPAIGRFREFLGSRCGGYQALADLKRALSSLDRNRSGMLDKGDLMRSVVQMLNSFGVYLSPSHIEDLCPYFERTGDGRMRYDEFIDAVCGPMHPHRVALVKMAFDSLDTERTGAVTLAHVGGQYDVSHHPRVRSQQIRPRDASLELMRVFDKSAEQLVSFDEFLGFYRWISPNIDSDEYFEFMMRSAWHIPGISQQLPAGELRLLVAHRDGLFSIEHVRADASTDPAVILSQLRSLRGIDALHVDIAF* # ORIGINAL: g12688.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 22507 25258 . - . ID=g12688;Name=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 22507 25258 . - . ID=g12688.t1;Parent=g12688;Name=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 24914 25258 . - . ID=g12688.t1.exon1;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 24914 25258 . - 0 ID=cds.g12688.t1;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 24674 24780 . - . ID=g12688.t1.exon2;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 24674 24780 . - 0 ID=cds.g12688.t1;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 24183 24523 . - . ID=g12688.t1.exon3;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 24183 24523 . - 1 ID=cds.g12688.t1;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 22757 24002 . - . ID=g12688.t1.exon4;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 22757 24002 . - 2 ID=cds.g12688.t1;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 22507 22645 . - . ID=g12688.t1.exon5;Parent=g12688.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 22507 22645 . - 1 ID=cds.g12688.t1;Parent=g12688.t1 #PROT g12688.t1 g12688 MRPCEWSARVVFFSAIAVALLGSLVQSATEIGYQVHSYNDLREWPQTLRKGATWLKIDPHFMPTEFCASQPNVKDPSRGCFLLNHDDPVAERKSYFALDDVLDFATSPENVNIFSGPETIFIALCFKYDNPCDGSPASANWTALVDTFFDSANSAIAAHGLNVEFILDGAATPTQKCLANRWRPWNATWIVMRDPWDAATSDDPTLGYDRFTINNMPEGKPSYLLVSVMRAIHYGKFAGRSMPYLLWEPSDQKSILEIASTYRNGPRHTPGFRFAINIDPVQFLIYSARASGNAWNVELPTVDASSLGGFTTTSGIAFGDPLVVSLNYGTDHESDLHTSLIIVVERATTEAAVVAGESTTVAEVRAYGVNAVGTIVVPLRDPVGVLAGGDSPFGLLGSAVVSASIVHTAHSSSAPVLLIADNAGSYVALSLAERPIPSLEVVARGSLPASTSDSQIAYHSIAASPLRDKTMAVDVISTSECGALLRSFVSANDPAPLSNAVVVENGTVCVSSSPVKSASVALVRDEETATCDGGHVVIATFARSNAEVVMATVLCVTEATGFHVISPASPLTVGTEAHVAVAAIPAVGIIFAVTTKDGFPFNTVKHNTQNKPALCDLEPTSTPNVLTYTVGSVRGLIAQLASGSVASACSRHVAHGMYDMGSSAPVVSLAPADNEDGDSRTRAVTLVAVHTGIHADTKDSAGCGLPVAYSGTIMDGWDVDLTLWA* # ORIGINAL: g12689.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 26226 26993 . + . ID=g12689;Name=g12689.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 26226 26993 . + . ID=g12689.t1;Parent=g12689;Name=g12689.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 26226 26993 . + . ID=g12689.t1.exon1;Parent=g12689.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 26226 26993 . + 0 ID=cds.g12689.t1;Parent=g12689.t1 #PROT g12689.t1 g12689 MPFAAFGHGVYSPIQQAIVNRVLRQYAIQDARGEYSLPVTAAMPTAKQVENRLFDAFVEEVRTPGKYPHNQQLSGQTTCLRTTYLAKRPRMGALAAPPRTAAPAPATAAAPAPLALPVPGSTFAAAATIGTAAADVAVAPAVSAQAAGMAGALVPDVPPKPKVCTGRFKACRRPLTDGKRYCNACRCTPKTKKGHRCEMEAASNGECSLHRTVQTRQARTQLAMLSVFLGMVGNPLKRRQAMMWDDLQGRLADRQ* # ORIGINAL: g12687.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 16552 21841 . - . ID=g12687;Name=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 16552 21841 . - . ID=g12687.t1;Parent=g12687;Name=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 21781 21841 . - . ID=g12687.t1.exon1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 21781 21841 . - 0 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 21467 21617 . - . ID=g12687.t1.exon2;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 21467 21617 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 21138 21337 . - . ID=g12687.t1.exon3;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 21138 21337 . - 1 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 20705 20916 . - . ID=g12687.t1.exon4;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 20705 20916 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 20456 20549 . - . ID=g12687.t1.exon5;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 20456 20549 . - 0 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 19847 20161 . - . ID=g12687.t1.exon6;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 19847 20161 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 19477 19635 . - . ID=g12687.t1.exon7;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 19477 19635 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 17174 19336 . - . ID=g12687.t1.exon8;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 17174 19336 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 16838 17011 . - . ID=g12687.t1.exon9;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 16838 17011 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 16552 16631 . - . ID=g12687.t1.exon10;Parent=g12687.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 16552 16631 . - 2 ID=cds.g12687.t1;Parent=g12687.t1 #PROT g12687.t1 g12687 MPESCSSCDKPIFGQVVNVDGSPMCKPCADEINQAISSATRGAKAMFNAGGPPSNAQASQQSKPAPSQASPARPSVTDSSSGGISSTTPWSNSKIKGDSPLPLSGASVAEKDAAEAWVFGGENARGELTGEVYVLGTAGLSSWTKVPVTGVPPSPRTGHASVFVSGKMYTFGGRTGHSTEDDGLFVLNAQSKAWSRPRVQGALPSARQGHALAAIGEHIYLFGGVQNNTRLGDFYVLDTKSLGWVHVEHSGKAPSPRSGHSLVASGGQLYLFGGRGKSHDAGNAVHVFNPSSKAWSVLSPSGTIPAAVAEHGACATDDGTLYVFGGNVPTKGEDVDHLFALNTKTGEWISYQAAGAFGPSPSARRAHACVALKSKLFVFGGAGGSRGSLDDVHILDLTKLKPEFRHARPAAQHSCQLNDDSGATTTPVSHSLPTPSVTPAPAVTPAPAQPVQQQAKPAASPSVAPVQASTPSASSAASEASALKASLAAKEDEIVRLRSTGASLEAQLRAADEQSKAAAAAAASAKQDAESATARVAVLQKEVEAAKAASAGAAANAGAAAASANRDVELSATVARLEAELDTSKKAVAAAVAEKAKISEELKTAVERASSASSQKETSYTTELAALKVSVASSDAKVAQLTAEIAALKTTVAENAKEKAALQSEVVSAKDASANASKQLHIGASEEVDKLRASVTSAEAKAKALADELACVRAAADAARNDTTLKEKELASVAAQLAGAVEEKARLAAELKVVRERAEKDGNEKEKSLLAEIASLRPNIAAAEARATAAEASLASLKVSYDALQAQATKSEATAKDLRGSVAELEKTVEGLKSQLSGRDADGAAQRAKIAEVEALLAAAVARATSAETESASLRKSAASSDDLGAAKKAAATAEAALASTKALLDAKVAEVTAIGAKISALETDASNAKGRASTLEAESSSLNTKAALQEQELSAVRTKLAGIETELAATKAASASASSQATAATSAQEAARKEADARAAAEKERDAVRASFKDAEAKAKDLEAKVKSLEAQVAQLQKTASSAPSPSPAPLAAASNTKDIARIAELEKLVETLRAEVVSASASASASAGGPPPPPPPMGGPPPPPPMGPPPPPPPMAGAPSLPAGDAKRGALLDQICGGVKLKKAPKLEEKGPGAASGPASPRGGSATNSPSVERKGSVAGGGGMGALMAEMAAKKLQKKA* # ORIGINAL: g12686.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 13211 16185 . - . ID=g12686;Name=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 13211 16185 . - . ID=g12686.t1;Parent=g12686;Name=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 16108 16185 . - . ID=g12686.t1.exon1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 16108 16185 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 15926 15981 . - . ID=g12686.t1.exon2;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 15926 15981 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 15617 15811 . - . ID=g12686.t1.exon3;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 15617 15811 . - 1 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 15415 15481 . - . ID=g12686.t1.exon4;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 15415 15481 . - 1 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 15232 15294 . - . ID=g12686.t1.exon5;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 15232 15294 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 14998 15063 . - . ID=g12686.t1.exon6;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 14998 15063 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 14663 14803 . - . ID=g12686.t1.exon7;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 14663 14803 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 14366 14437 . - . ID=g12686.t1.exon8;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 14366 14437 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 13529 13854 . - . ID=g12686.t1.exon9;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 13529 13854 . - 0 ID=cds.g12686.t1;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 13211 13421 . - . ID=g12686.t1.exon10;Parent=g12686.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 13211 13421 . - 1 ID=cds.g12686.t1;Parent=g12686.t1 #PROT g12686.t1 g12686 MPAGKPSLCPHHEQQLYSCMRLLKAKRRQLLKEIDVIFEKFAATRLVDDTYTRNELAEMLGVLQSIAKGDLDAELAHSCHTHALLVAQLFGAAQSAGVELSIDEDALENMDLLSEMAAREEELATTTHVASKVADGRWHPAGGFITPTALLQQDIDRLRKELVVAHERTRKAEAAAAVGLLEKSAMESMRAETAALRTNVVSESTPSAPPGCTTPSHATPLKTDSERSSPSLLGLPSPQPPPPRSQGQIGALAREVGALRVEREAAVGAAALAASLEKQVIALTAERDALTISAQALHRAVTAPPPPSSADKDVTKPDSAVTPPRLASVTQTNNLKKMLTTKNEQIRELRNRLRRYEPDNYGVEEEGFVNQRDAWATQSAANGIPSEKCTPDDSGGRVPVNAPASSAGKTPGDGMDNEFANSVG* # ORIGINAL: g12685.t1 original gene structure, not modified by PASA NODE_225_length_30642_cov_42.0876 AUGUSTUS gene 4478 12729 . + . ID=g12685;Name=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS mRNA 4478 12729 . + . ID=g12685.t1;Parent=g12685;Name=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 4478 4618 . + . ID=g12685.t1.exon1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 4478 4618 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 4834 4938 . + . ID=g12685.t1.exon2;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 4834 4938 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 5104 5143 . + . ID=g12685.t1.exon3;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 5104 5143 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 5298 9115 . + . ID=g12685.t1.exon4;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 5298 9115 . + 2 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 9287 9659 . + . ID=g12685.t1.exon5;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 9287 9659 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 9861 10576 . + . ID=g12685.t1.exon6;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 9861 10576 . + 2 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 10809 10943 . + . ID=g12685.t1.exon7;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 10809 10943 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS exon 11110 12729 . + . ID=g12685.t1.exon8;Parent=g12685.t1 NODE_225_length_30642_cov_42.0876 AUGUSTUS CDS 11110 12729 . + 0 ID=cds.g12685.t1;Parent=g12685.t1 #PROT g12685.t1 g12685 MSTTDSKPPSADYLRTLPLDALLREKGAIKKNLRAFDIQFERETGRMPTKTEKEPMRAWYRSYREVKSLIDDVVSSGQHDAEASDGGDDGPSLPNTPKVPADSQQLQQPRMRTSSSATDTASSRGMEQRSMSMGSRRGLTGSSVPVPVAAAAPSPSNGEARTIPVRRRETLDTSANNSGERIRMRTSTADSARGDDTKTPTATTTTAAAGDAGSGRPPRVRTSSASNEAASSAKPRLKRAATESVASPGEKIAAVASSPSPARRSIDGTARDVGGTLTATRVRSTPTDPPLPVKVRVRASRLVSSATVADDSSASPDVRKVVTLTAKGAEEAAAPPRTRTASDAGGGVSASGTPGVGASPSRQSRLPRQVTADAAQSTAGEDAFRSRSQSDGASLRTSSSGVRSRSSVSGSADAPRAGSAVDGASERPRTTMVRSSSKGELNRAQSAADKTESPASARKMVRQPSGTDVAARPSGLPRRASIKGDITTQDAAAKTAPQQQALTAAAVAVASTGSSSAMRRQGSKSSDVGSTRAADGVRSAPPSGRPPTGDGMRRQNSKSELNAASAEPVAASAFGGRVASSARTTPSSSAGASSGTTGDSKPPKGLVRSASGSGAGMKRTPSNSDLPEGSPARTRSSSTAAAAAAGDHVPVPASPSTARKMQRNPSASELATGKAAASASSGEQQPTSRIARSGSSGRLATSNDIPAPKSSAAKLARQGSEVDAAPHKSSSAHARAGRTDGKSETKHEGKSDTKHDGKSSSKAEAGGHAVTTKSASRPPKPQLDHDAPKTASRGVSSLLSSPAAASPITKRANSASSLMVPEKAEADSKSGYSSDADTGVIKRGSVRSAMQQLGLAKDAKMDAPSPVKRDPSPSRFAPGEGTPRRLSPSSEPPWVREAAAAAAAAAAPSADSQGRSPPPDRSPRIDAGVQVPGGSARAATKMWEQIASTGDESPGAQSPVRGRPASSATVVSGREGADLSELNLSSSRVVASVATNFQRQADLSAGSSARVRSPSPAGRAVTPSATSPVTSPAKTTTTAVKRVRMAEQPAVVLTVAPAPSAAPEADAPARDTFATTNVIPIVCAPAVAVEEVEYASADSNKRTAVSMVPVDTPTHDIHAARGAIVSRIASTIDVEDVISIPAESTPSPGVHREEADVSTTTKETKADGADVDAAHTKRVEFLRSDKKAVVPGESDSYTDTDGTGDEELADVTPRVRTSSGSLTSRAGQPGHVAHQVAAAPLPVFARSRSSKKLQVGPVTASHSAHTSPQPPAGTIVDEKGPSPTSTIVRSGGKHGGRGGDETEEVSPTGKPALLRKSSKGNLHAHAAPSHGSHKDDAGEFKKPQMQRKASNKDVSKFARQQTEDELEKPRKRSLIEEYADVTSDMPTLKALTANRISIKRPQRHKSTSNPVRQLQNRLDEYDGDKDRKRDGGGGGGGSSGKATGVRADQLRLLADLGQALGNEAKSALASTESFQVKLRKVSMGSDDGSVTGAALSVGGIPSQSAPMLYHVRGRKRIQSKVVERSHDTLKQGGVFVLDCGQVLYQYNTPSANAIEKVKAADMCVRIKNQERGGRAQIVEVNANGKDSAAFWQALSVKDSEGRRLSMADNVAPDPIADEAFERETVEQWRFYSAYDGELSAIPEMSGRIPSMASLDPTQSIVVDTGSEVYLWVGKKAPDAARKGAMDAARRLFDEVKRPPWAILRRIAAGTEPVLFKDKFSDWPDAQLIQAKVYVGGAVAASKRDLVPCEAAQLLASKPHLPPDDAPDDDGTTGTLEVYRVCEVDKELVLPSEHGHLFSEESYVMRYTYRPKNRDLSLYYFWQGVDSSINEKGAAALFTVDMDKDGGRQVRVPQGKETRHFVSLFKGLLFVHKGRIRRAMGFGDGHASPSGNRRRSIMGSPATFRRQSVDAGSAPVPGSPGVPGGSGGASLGSASNLLTAPESLSVSRRTSMNDSLWVHTRMYSVHGRAHVRAAVVECHHPSRDGLSNLHSVIIASPIASTVFAWRGSLATESNWTHAVRAATSLSEAIGASGSGAQGVVHVREGSEPTSFWEALDTETRRDAAACGPTTVYAAPTWQPDPAHVARARHMHKKASHDPRLFEFHSATGEFTFTEVHPPQQGDLAAWGVFMLDAWDSVYLWIGPASKDLPDRKLALETAAGYAAHVIEVDGRPHPVESYVVYAGGEPTEFTQHFQCWDYECSARLKLAAAQSPSTPTILVGDAATGEGDDAGTSTAPDASEAVGLVSLNIILQRYRRTTFTMAELQLRPLPAGVDATRLETYLDDAEFFTVLGVDRAAFEAMPVWKRADMKKKANLF* # ORIGINAL: g3385.t1 original gene structure, not modified by PASA NODE_2539_length_5977_cov_41.319 AUGUSTUS gene 457 2331 . - . ID=g3385;Name=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS mRNA 457 2331 . - . ID=g3385.t1;Parent=g3385;Name=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 2208 2331 . - . ID=g3385.t1.exon1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 2208 2331 . - 0 ID=cds.g3385.t1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 1856 1941 . - . ID=g3385.t1.exon2;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 1856 1941 . - 2 ID=cds.g3385.t1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 1576 1671 . - . ID=g3385.t1.exon3;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 1576 1671 . - 0 ID=cds.g3385.t1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 1285 1402 . - . ID=g3385.t1.exon4;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 1285 1402 . - 0 ID=cds.g3385.t1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 727 873 . - . ID=g3385.t1.exon5;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 727 873 . - 2 ID=cds.g3385.t1;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 457 575 . - . ID=g3385.t1.exon6;Parent=g3385.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 457 575 . - 2 ID=cds.g3385.t1;Parent=g3385.t1 #PROT g3385.t1 g3385 MANPVCFFDISIGGSYAGRIVMKLYADTAPKTAENFRALCTGEKGLGRSGIPLHYKGCSFHRVIPGFMIQGGDFTNHNGTGGESIFGEKFEDENLTLLHDRKGLLSMANAGPNTNGSQFFITVVPTPHLNGKHVVFGEVISGMRLVHHIEALPTESDKPLSPVVIFDCGQIPEGTPHLPVSEDDPYPEWPEETDEFSEEAIAKLADVVKASGNTAFKAGNYALAIQKYSK # ORIGINAL: g3387.t1 original gene structure, not modified by PASA NODE_2539_length_5977_cov_41.319 AUGUSTUS gene 4223 5832 . + . ID=g3387;Name=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS mRNA 4223 5832 . + . ID=g3387.t1;Parent=g3387;Name=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 4223 4498 . + . ID=g3387.t1.exon1;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 4223 4498 . + 0 ID=cds.g3387.t1;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 4688 4790 . + . ID=g3387.t1.exon2;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 4688 4790 . + 0 ID=cds.g3387.t1;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 4981 5168 . + . ID=g3387.t1.exon3;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 4981 5168 . + 2 ID=cds.g3387.t1;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 5537 5667 . + . ID=g3387.t1.exon4;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 5537 5667 . + 0 ID=cds.g3387.t1;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS exon 5820 5832 . + . ID=g3387.t1.exon5;Parent=g3387.t1 NODE_2539_length_5977_cov_41.319 AUGUSTUS CDS 5820 5832 . + 1 ID=cds.g3387.t1;Parent=g3387.t1 #PROT g3387.t1 g3387 MQRLTRALGRGLGAWAGLRSTLRDTRSTPSLRRHASTTPSSPSPIAPTVLPMPQPLFQLATVETWAGVRNPKIDPNAYLALGLGAFITAGYISYEMGLYDLFFTVSRGYGQTSKPVDRAELNLVQQVPASPSEADAAPVAEETTPETTPVVAAPIERVFPDTVPYLLIGGGTASFAAMKAIRENDAKAKILIVGEESDLPYMRPPLSKELWYSDDRDAASALKFKDWSGKEREGFN* # PASA_UPDATE: g3386.t1, single gene model update, valid-1, status:[pasa:asmbl_4518,status:12], valid-1 NODE_2539_length_5977_cov_41.319 . gene 2682 3545 . + . ID=g3386;Name=g3386.t1 NODE_2539_length_5977_cov_41.319 . mRNA 2682 3545 . + . ID=g3386.t1;Parent=g3386;Name=g3386.t1 NODE_2539_length_5977_cov_41.319 . five_prime_UTR 2682 2879 . + . ID=g3386.t1.utr5p1;Parent=g3386.t1 NODE_2539_length_5977_cov_41.319 . five_prime_UTR 3005 3006 . + . ID=g3386.t1.utr5p2;Parent=g3386.t1 NODE_2539_length_5977_cov_41.319 . exon 2682 2879 . + . ID=g3386.t1.exon1;Parent=g3386.t1 NODE_2539_length_5977_cov_41.319 . exon 3005 3545 . + . ID=g3386.t1.exon2;Parent=g3386.t1 NODE_2539_length_5977_cov_41.319 . CDS 3007 3294 . + 0 ID=cds.g3386.t1;Parent=g3386.t1 NODE_2539_length_5977_cov_41.319 . three_prime_UTR 3295 3545 . + . ID=g3386.t1.utr3p1;Parent=g3386.t1 #PROT g3386.t1 g3386 MPLEREKTGLPPWMAHFSLTSFVAGMLAARFNKRVFFGLVGGIISGMYIEQNYNVPDMGKLTTGLTAAAKDAAQPYVDVVEEVSKNLPKDPPKGN* # PASA_UPDATE: g5571.t1, single gene model update, valid-1, status:[pasa:asmbl_6381,status:12], valid-1 NODE_3667_length_2994_cov_40.1682 . gene 60 2748 . - . ID=g5571;Name=g5571.t1 NODE_3667_length_2994_cov_40.1682 . mRNA 60 2748 . - . ID=g5571.t1;Parent=g5571;Name=g5571.t1 NODE_3667_length_2994_cov_40.1682 . five_prime_UTR 2605 2748 . - . ID=g5571.t1.utr5p1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 2569 2748 . - . ID=g5571.t1.exon1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 2569 2604 . - 0 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 2425 2457 . - . ID=g5571.t1.exon2;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 2425 2457 . - 0 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 2126 2248 . - . ID=g5571.t1.exon3;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 2126 2248 . - 0 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 1869 1992 . - . ID=g5571.t1.exon4;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 1869 1992 . - 0 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 1544 1639 . - . ID=g5571.t1.exon5;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 1544 1639 . - 2 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 1158 1329 . - . ID=g5571.t1.exon6;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 1158 1329 . - 2 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 803 864 . - . ID=g5571.t1.exon7;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 803 864 . - 1 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 427 575 . - . ID=g5571.t1.exon8;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 427 575 . - 2 ID=cds.g5571.t1;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . exon 60 155 . - . ID=g5571.t1.exon9;Parent=g5571.t1 NODE_3667_length_2994_cov_40.1682 . CDS 60 155 . - 0 ID=cds.g5571.t1;Parent=g5571.t1;3_prime_partial=true #PROT g5571.t1 g5571 MLAQSHKRPHTPTKEDMPNKRAKTAELLKNATLADVLKQKRDAIDGKHHVVVLYHNSRVKEAMETMAHNSILAVPVLAEDSIEDNEGGVYLGFVDVLSVLHSIMREIRSPDDSKDGWIRLKTFHEKDFGNHLLITVTSGSDAGFAFRGFEGQSLENVVKSAFLHDSTTGAFVHRVAIFNGRGHIVNIVSQSDIVRYLNANYDRLGSVVNKTIGDLGFAPRDVLVVKEDDLTADACDLMDRKHIAAVGVVDGDGRLVNNFSASDLRGLRTGQIGTHLQMSVKEFLEYSPLHKRKMDAH # PASA_UPDATE: g6666.t1, single gene model update, valid-1, status:[pasa:asmbl_9270,status:12], valid-1 NODE_767_length_17941_cov_38.0677 . gene 12830 17686 . + . ID=g6666;Name=g6666.t1 NODE_767_length_17941_cov_38.0677 . mRNA 12830 17686 . + . ID=g6666.t1;Parent=g6666;Name=g6666.t1 NODE_767_length_17941_cov_38.0677 . five_prime_UTR 12830 12924 . + . ID=g6666.t1.utr5p1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 12830 12976 . + . ID=g6666.t1.exon1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 12925 12976 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 13115 13235 . + . ID=g6666.t1.exon2;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 13115 13235 . + 2 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 13596 13764 . + . ID=g6666.t1.exon3;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 13596 13764 . + 1 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 13988 14198 . + . ID=g6666.t1.exon4;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 13988 14198 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 14353 14883 . + . ID=g6666.t1.exon5;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 14353 14883 . + 2 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 15188 15300 . + . ID=g6666.t1.exon6;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 15188 15300 . + 2 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 15455 15595 . + . ID=g6666.t1.exon7;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 15455 15595 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 16091 16235 . + . ID=g6666.t1.exon8;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 16091 16235 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 16461 16522 . + . ID=g6666.t1.exon9;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 16461 16522 . + 2 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 16920 17081 . + . ID=g6666.t1.exon10;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 16920 17081 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 17250 17362 . + . ID=g6666.t1.exon11;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 17250 17362 . + 0 ID=cds.g6666.t1;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . exon 17659 17686 . + . ID=g6666.t1.exon12;Parent=g6666.t1 NODE_767_length_17941_cov_38.0677 . CDS 17659 17686 . + 1 ID=cds.g6666.t1;Parent=g6666.t1 #PROT g6666.t1 g6666 MASTGLEAGVRALHLETDLEKEIRSVLRNKLMFIDGAMGTMIQTYRLQEEDFRGEEFKNHEKNLKGNNDLLCLTRPEIIYEIHKQYFEAGADFVETNTFSSTTIAQADYALEHLAYRLNVEAAKIAKRAATDVMAASGGSRKCYVAGAIGPTNRTLSISPSVEKPDYRNVTWDELVVAYKEQAAGLLAGGADVLLVETIFDTLNAKAALFALDLLFEEMGSRVPLFISGTIVDKSGRTLSGQTGEAFVISVSHARPIAIGLNCALGAAEMRPFIEAIGKATDAFIICYPNAGLPNTFGGYDESPEMFGESMREFARDGLVNLIGGCCGTTPKHIAAIVKAVEKITPRVPPEHVAPNSMRLSGLEPFIISSVTNFVNIGERCNVAGSRRFAKLIVNGDYEEALTVAKQQVELGAQVLDLNFDEGMLDSKFAMTKFVNLIASEPEIARVPLCIDSSNFAVIEAGLKCAQGRCIVNSISLKEGEKDFIAKAKLIRRYGAAVIAMAFDEEGQAADEDRKVEICAREFKILTEIVGFNPSDVIFDPNILTIATGMEEHSGYGVAFINATRRIKEACPGCRISGGVSNLSFSFRGMETIREAMHSVFLYHAIKLICGDVVD* # PASA_UPDATE: g6665.t1, single gene model update, valid-1, status:[pasa:asmbl_9272,status:12], valid-1 NODE_767_length_17941_cov_38.0677 . gene 11322 12170 . - . ID=g6665;Name=g6665.t1 NODE_767_length_17941_cov_38.0677 . mRNA 11322 12170 . - . ID=g6665.t1;Parent=g6665;Name=g6665.t1 NODE_767_length_17941_cov_38.0677 . five_prime_UTR 12126 12170 . - . ID=g6665.t1.utr5p1;Parent=g6665.t1 NODE_767_length_17941_cov_38.0677 . exon 12005 12170 . - . ID=g6665.t1.exon1;Parent=g6665.t1 NODE_767_length_17941_cov_38.0677 . CDS 12005 12125 . - 0 ID=cds.g6665.t1;Parent=g6665.t1 NODE_767_length_17941_cov_38.0677 . exon 11322 11764 . - . ID=g6665.t1.exon2;Parent=g6665.t1 NODE_767_length_17941_cov_38.0677 . CDS 11349 11764 . - 2 ID=cds.g6665.t1;Parent=g6665.t1 NODE_767_length_17941_cov_38.0677 . three_prime_UTR 11322 11348 . - . ID=g6665.t1.utr3p1;Parent=g6665.t1 #PROT g6665.t1 g6665 MSSAGRKGVLPSWLAGWIQFAGLVVLWDSCFVLTRPASLAADNYGRIFEPYKLYITIDKLYGDMDSGFVVAQSIVNLLEITMGFIGCHLSRKGRPSALVWIFAASLMTLSKTVIYFLSDACASFENTRHNNTSDLVKLYIIPNGVWIIVPSLAVLHCWGRLSAAVNAVAFNSQKAKRN* # PASA_UPDATE: g6664.t1, single gene model update, valid-1, status:[pasa:asmbl_9271,status:3], valid-1 NODE_767_length_17941_cov_38.0677 . gene 3229 10320 . - . ID=g6664;Name=g6664.t1 NODE_767_length_17941_cov_38.0677 . mRNA 3229 10320 . - . ID=g6664.t1;Parent=g6664;Name=g6664.t1 NODE_767_length_17941_cov_38.0677 . five_prime_UTR 9949 10320 . - . ID=g6664.t1.utr5p1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 9919 10320 . - . ID=g6664.t1.exon1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 9919 9948 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 9184 9432 . - . ID=g6664.t1.exon2;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 9184 9432 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 8794 8977 . - . ID=g6664.t1.exon3;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 8794 8977 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 8002 8198 . - . ID=g6664.t1.exon4;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 8002 8198 . - 2 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 7495 7698 . - . ID=g6664.t1.exon5;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 7495 7698 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 6972 7162 . - . ID=g6664.t1.exon6;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 6972 7162 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 6598 6760 . - . ID=g6664.t1.exon7;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 6598 6760 . - 1 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 6183 6353 . - . ID=g6664.t1.exon8;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 6183 6353 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 5657 5784 . - . ID=g6664.t1.exon9;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 5657 5784 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 5336 5437 . - . ID=g6664.t1.exon10;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 5336 5437 . - 1 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 4910 5030 . - . ID=g6664.t1.exon11;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 4910 5030 . - 1 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 4608 4697 . - . ID=g6664.t1.exon12;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 4608 4697 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . exon 3229 4344 . - . ID=g6664.t1.exon13;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . CDS 4183 4344 . - 0 ID=cds.g6664.t1;Parent=g6664.t1 NODE_767_length_17941_cov_38.0677 . three_prime_UTR 3229 4182 . - . ID=g6664.t1.utr3p1;Parent=g6664.t1 #PROT g6664.t1 g6664 MKAVTSRLGKLKKSIKKDKKKKPEVATGGSSLDGSSGNGSGSSSDPNSPVEESASLRPAVPDSHVTYTEDPQRQGKPLSAVAPAIATLAAMDEPRKGSPQRHHSPNEPPKVGAIDKFKKQKADLPLNRTPQKRQHSSRFRVSQKVEIQKLASFKDVPPHEREELFCKKLQQCCVIFDFTDALSDLKGKEIKRATLNDLVEFITNNRNVITERIYPEAVNMFASNLFRTLPPSSNPTGDAYDPEEDEPVLEAAWPHLQIVYEYFLRFLESSDFQPNIAKKNIDQNFVLNLLELFDSEDPRERDFLKTTLHRIYGKFLTLRAFIRRSINNIFFQFIYESEHHNGIAELLEILGSIINGFALPLKEEHKVFLTRVLIPLHKVRPLTLYHPQLAYCVVQFLEKDPSLTEPVIKGLLKYWPKTNSPKEVMFLNEIEEILDVIEPSEFQKVMELLFHQLAKCVSSPHFQVAERALYYWNNEYIMSLVSENGSVILPIMFPSLYRNSKSHWNRTIHGLVYNALKMFMDMNPKLFDECTHKYKAERQKEKKRLREREELWTRIEELARKNPSVGGLGNGLFTGAGGVVQSADGQKVEAKANRHDSVIEGDMDSIKNIDPKFAANVDPSKFNPRLRRKSVLPQDMEVVTALDKHQSLEDVLGRVDDSENKTR* # ORIGINAL: g6663.t1 original gene structure, not modified by PASA NODE_767_length_17941_cov_38.0677 AUGUSTUS gene 240 2704 . + . ID=g6663;Name=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS mRNA 240 2704 . + . ID=g6663.t1;Parent=g6663;Name=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS exon 240 478 . + . ID=g6663.t1.exon1;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS CDS 240 478 . + 0 ID=cds.g6663.t1;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS exon 678 719 . + . ID=g6663.t1.exon2;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS CDS 678 719 . + 1 ID=cds.g6663.t1;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS exon 1027 1962 . + . ID=g6663.t1.exon3;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS CDS 1027 1962 . + 1 ID=cds.g6663.t1;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS exon 2164 2704 . + . ID=g6663.t1.exon4;Parent=g6663.t1 NODE_767_length_17941_cov_38.0677 AUGUSTUS CDS 2164 2704 . + 1 ID=cds.g6663.t1;Parent=g6663.t1 #PROT g6663.t1 g6663 ADRDAWYNVIAPRSRKNDETRRAHKESRRGLGSSGDGGTLRSGKGRETGRVSNLSDTDDGMSDDEFDGRFEMPVDMVVFRDDGSQSEDDLLSTRTKSQSVAGETTVSFQPATVGSLSSATPRNDSLPTIVPPDGPDSDASVGDTLSPGSLRASNPLPPPRVKKTKPRNMSMGATQQPATDSLGPGLDPPSSPRRGMRPSISDSALSGSASASAARAAAASTTDASTTDAGTAGVTPASTAAFDNTILDAIDSYATSSTENDANDARVLDLSPVSGSAESVLPAVQTHPTATTAEDTHISTSAATTIASTAIGGSRSSPATPRVSGSSVATLASPIPQRHHVPSEGEEDRSGDESGAQSSDVIGVFPVGYAGTTLQSRGGFELSALSTMKLTPVSLARDRGESRAGRSGSIVPFESSSSSHHPGGNNNTLVIPPFHAMHSDLAPPSKRPYSGTLVPRPPVKQVDRTVSTRNHHHQHQHGASPRPSTDATHTSPAVSRDAALAAAAHPTEGDLSLASLMQSVAIAATASLTSAFAMPNPPQGMSTPTSASTATTAAAGDPSHLSHHPGAVEGANAPSHEHSAFADAL* # ORIGINAL: g3246.t1 original gene structure, not modified by PASA NODE_411_length_24373_cov_41.2876 AUGUSTUS gene 138 263 . + . ID=g3246;Name=g3246.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS mRNA 138 263 . + . ID=g3246.t1;Parent=g3246;Name=g3246.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 138 263 . + . ID=g3246.t1.exon1;Parent=g3246.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 138 263 . + 0 ID=cds.g3246.t1;Parent=g3246.t1 #PROT g3246.t1 g3246 GEECYAPGSRNIRNMDVSPTVLHALGFAQPDLWIGRPVEAF* # ORIGINAL: g3248.t1 original gene structure, not modified by PASA NODE_411_length_24373_cov_41.2876 AUGUSTUS gene 3113 5682 . - . ID=g3248;Name=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS mRNA 3113 5682 . - . ID=g3248.t1;Parent=g3248;Name=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 5586 5682 . - . ID=g3248.t1.exon1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 5586 5682 . - 0 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 5231 5430 . - . ID=g3248.t1.exon2;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 5231 5430 . - 2 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 4807 5061 . - . ID=g3248.t1.exon3;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 4807 5061 . - 0 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 4453 4578 . - . ID=g3248.t1.exon4;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 4453 4578 . - 0 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 4105 4192 . - . ID=g3248.t1.exon5;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 4105 4192 . - 0 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 3591 3958 . - . ID=g3248.t1.exon6;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 3591 3958 . - 2 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 3313 3424 . - . ID=g3248.t1.exon7;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 3313 3424 . - 0 ID=cds.g3248.t1;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS exon 3113 3192 . - . ID=g3248.t1.exon8;Parent=g3248.t1 NODE_411_length_24373_cov_41.2876 AUGUSTUS CDS 3113 3192 . - 2 ID=cds.g3248.t1;Parent=g3248.t1 #PROT g3248.t1 g3248 MPPKRPTNAAQPESKRRKVEEAEVEEDAGEEAVDDAVFGDSDEEDGGESHEGSCDDEDCGGCASGDITFEFPDGVVPDSHGLFKIAFEEMHGGNAIAGQRLFEMSLNAFVTEEEATETKKTREFYYWWGTTALEFGSFIEVSDFARIAVEKFTKALSLAADAEDKEAHSDKDVLVALGRSHFELARLYHSDAVMATDEDEAEEADAAKKRADERSHVELGKECYTKALATVTSDQDRAAELALYGQSIQTYAEILFDEIDRLNEYLDLAIEKFVESARLNSSDLYPIGRWGIALLQKALALDDEDEESDEEDEEDEEDGESGARAAAKGKDKPALSDAEKAARTAERRRLLTEASEKIKGALDSVKDEEDGQFMFHQKLGQTYLELSTLEEDVVKAEKLIADGVAEYHAALAIQHNEELAELVEQIESDGPKSFSTTRINQ* # PASA_UPDATE: g3251.t1, single gene model update, valid-1, status:[pasa:asmbl_6992,status:12], valid-1 NODE_411_length_24373_cov_41.2876 . gene 23761 24312 . - . ID=g3251;Name=g3251.t1 NODE_411_length_24373_cov_41.2876 . mRNA 23761 24312 . - . ID=g3251.t1;Parent=g3251;Name=g3251.t1 NODE_411_length_24373_cov_41.2876 . five_prime_UTR 24304 24312 . - . ID=g3251.t1.utr5p1;Parent=g3251.t1 NODE_411_length_24373_cov_41.2876 . exon 23761 24312 . - . ID=g3251.t1.exon1;Parent=g3251.t1 NODE_411_length_24373_cov_41.2876 . CDS 23947 24303 . - 0 ID=cds.g3251.t1;Parent=g3251.t1 NODE_411_length_24373_cov_41.2876 . three_prime_UTR 23761 23946 . - . ID=g3251.t1.utr3p1;Parent=g3251.t1 #PROT g3251.t1 g3251 MPDNPGRTLDIFLHLIRESDNMVVRCEINDIERYQFEAHFLEPLEQAPFGPAGRTINAPNHQPDFLIVRFSFTHNFVVPRKFRCYFTTPKLFFTFLIIMAITVVPLGAVLCLICRMVW* # PASA_UPDATE: g3249.t1, single gene model update, valid-1, status:[pasa:asmbl_6997,status:3], valid-1 NODE_411_length_24373_cov_41.2876 . gene 8322 16962 . - . ID=g3249;Name=g3249.t1 NODE_411_length_24373_cov_41.2876 . mRNA 8322 16962 . - . ID=g3249.t1;Parent=g3249;Name=g3249.t1 NODE_411_length_24373_cov_41.2876 . five_prime_UTR 16880 16962 . - . ID=g3249.t1.utr5p1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 16657 16962 . - . ID=g3249.t1.exon1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 16657 16879 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 16128 16274 . - . ID=g3249.t1.exon2;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 16128 16274 . - 2 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 15661 15815 . - . ID=g3249.t1.exon3;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 15661 15815 . - 2 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 15441 15476 . - . ID=g3249.t1.exon4;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 15441 15476 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 14963 15070 . - . ID=g3249.t1.exon5;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 14963 15070 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 14611 14705 . - . ID=g3249.t1.exon6;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 14611 14705 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 14111 14238 . - . ID=g3249.t1.exon7;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 14111 14238 . - 1 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 13702 13798 . - . ID=g3249.t1.exon8;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 13702 13798 . - 2 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 13231 13465 . - . ID=g3249.t1.exon9;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 13231 13465 . - 1 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 12856 12963 . - . ID=g3249.t1.exon10;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 12856 12963 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 12518 12676 . - . ID=g3249.t1.exon11;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 12518 12676 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 12136 12306 . - . ID=g3249.t1.exon12;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 12136 12306 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 11789 11932 . - . ID=g3249.t1.exon13;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 11789 11932 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 11503 11588 . - . ID=g3249.t1.exon14;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 11503 11588 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 11143 11287 . - . ID=g3249.t1.exon15;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 11143 11287 . - 1 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 10697 10873 . - . ID=g3249.t1.exon16;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 10697 10873 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 10391 10562 . - . ID=g3249.t1.exon17;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 10391 10562 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 9987 10137 . - . ID=g3249.t1.exon18;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 9987 10137 . - 2 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 9581 9678 . - . ID=g3249.t1.exon19;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 9581 9678 . - 1 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 9214 9341 . - . ID=g3249.t1.exon20;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 9214 9341 . - 2 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 8906 9034 . - . ID=g3249.t1.exon21;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 8906 9034 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . exon 8322 8579 . - . ID=g3249.t1.exon22;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . CDS 8463 8579 . - 0 ID=cds.g3249.t1;Parent=g3249.t1 NODE_411_length_24373_cov_41.2876 . three_prime_UTR 8322 8462 . - . ID=g3249.t1.utr3p1;Parent=g3249.t1 #PROT g3249.t1 g3249 MAAEDEAATGAYKPRARDYAYERRKLNTRRTAVASHPLSGIGASADKKNALSAPSSAGDTKEAKEAVAKEAEQKAAAAAAEEAKKKKAFVDPLSALSVVDDDPLSATATLSVTGPSVPVAVAGGKVLEPEKLKEETDDQTFEPWNAKRNAILQRYTTSEKLSITTSFLAVKDREKVAVKAQTTVTDKVKYRLEQLDDVEEGSLQEMMDLSQQEYVARIEELNQELVKAWDADQRVKSLKIAIQCAKLLADTNVLRFYPSKFVLITDILDTFGRLVYDRIRRKSTYFQPGSNKPVPLPESFTPDMVPDSAKETCRNWFFKIASIRELTPRIYVECAILRCFNFLTTDEFSAALGRLSNMMRGIGDPLVAIYARAYLCRVGMQVAPHIRGYLMGNLSDSLYVYRQVQGPEVQRQIKTQHLDMPGYVALFIPALDWILQCIAYKAATNVMETIVAQYKEACNSAIVLNAIMGGFSPKYIASKAAAFTELIRDADETGFMRHQLYRTLGVSLVACEPPNERRRGILNEVWKVVSKLKDPKDYMSCTEVWIEFPVKYFTHKETNVLLGDAIEHMTPDRAFESHYPLLQSMVHKILAGMTDFAVLFSMENFLPFLDLFQKESIKVDVCKAVIESFVKHQTEDTSDPVILNAMMYIGKVLHDSVSALSFEDEKRQIGNLINGFLRRVSFGRDFEQQLNFCVQARATFSNLDSVMAHLVHAVNGLVMTAQRIVGGVHSRKTAVFVRACIAYCFITIPSIVDVYTRLSLYLVSGGVALANQSLPQADAFFKAAITLVPEMPAQTEIDKKMKSTEPILVTYLCNFAAAMLVVPDSPEFGSLYLVKGLVNVIQAYPWDANLDNKSQLLLHLLSLFQALAQEKYLYHIEGVESNDTLYGGDAAFMSEIALATDNIVEMLLEHLSGLAEKKTPEAHKRQADIAVELFNRLVAGGDVASGKTAGLTANLWNLARRHGQANDALMRRSLEYVRQRGTDADSDVAVRTAYQTLLAKLK* # PASA_UPDATE: g3250.t1, single gene model update, valid-1, status:[pasa:asmbl_6994,status:12],[pasa:asmbl_6995,status:12], valid-1 NODE_411_length_24373_cov_41.2876 . gene 17507 23701 . + . ID=g3250;Name=g3250.t1 NODE_411_length_24373_cov_41.2876 . mRNA 17507 23701 . + . ID=g3250.t1;Parent=g3250;Name=g3250.t1 NODE_411_length_24373_cov_41.2876 . five_prime_UTR 17507 17605 . + . ID=g3250.t1.utr5p1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 17507 17608 . + . ID=g3250.t1.exon1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 17606 17608 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 17758 17796 . + . ID=g3250.t1.exon2;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 17758 17796 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 17935 18162 . + . ID=g3250.t1.exon3;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 17935 18162 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 18484 18633 . + . ID=g3250.t1.exon4;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 18484 18633 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 19042 19080 . + . ID=g3250.t1.exon5;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 19042 19080 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 19298 19525 . + . ID=g3250.t1.exon6;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 19298 19525 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 20183 20329 . + . ID=g3250.t1.exon7;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 20183 20329 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 20634 20672 . + . ID=g3250.t1.exon8;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 20634 20672 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 20987 21115 . + . ID=g3250.t1.exon9;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 20987 21115 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 21419 21571 . + . ID=g3250.t1.exon10;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 21419 21571 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 21781 21903 . + . ID=g3250.t1.exon11;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 21781 21903 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 22251 22334 . + . ID=g3250.t1.exon12;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 22251 22334 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 22510 22584 . + . ID=g3250.t1.exon13;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 22510 22584 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 22765 22914 . + . ID=g3250.t1.exon14;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 22765 22914 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 23134 23274 . + . ID=g3250.t1.exon15;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 23134 23274 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . exon 23521 23701 . + . ID=g3250.t1.exon16;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . CDS 23521 23565 . + 0 ID=cds.g3250.t1;Parent=g3250.t1 NODE_411_length_24373_cov_41.2876 . three_prime_UTR 23566 23701 . + . ID=g3250.t1.utr3p1;Parent=g3250.t1 #PROT g3250.t1 g3250 MDTAAADRKEFAQEAMMHVVHGREVEKQREEERQRQMNEEKKLETVAQLVRRKSIIDVKNAQEEERQRQIAEEKKVDAQELLVRRKSIIQADVAMEAERMERIAESHRAVANEEIQRHANQKTADKLMDEEKELRIHDKQPLASNEKAEIVKEALMHKVHSKEVVEAQEEERERRILEDKKQDAVAQLVRRRSIIEVNHMQEEERQRQIAEEKKRDAQEKLVRRKSIMEADAAMEAERQERMAELVHVHANDEIQRHANQKTADKLMDAEKADRINEKPKDVPESVELLKESLMHKVHSKEAVEAQEEERQRLIFEEQKRDAISNAIRRKSIMDADHAMEAERKDRIAHEKALHNTEELSRALNARTADHLMEEERRSRVAADNKAEYYGRVERQHNQEEVDKAAEDERSRRLAEHEKEKFEKEILGTDADAHLKEEVLRAASTRMAVHAQEDERKRQIEEERNLDKKEIEDQHKAAAKADAEMDAERTRRVLEATKSEAQEEAVRVRNGQIADRDEDAEKERRVAEAKAADDAAAAERLVSQQAADVAAERERQERIMHGKDAPEVRQRRASIGQDVATEARKRSIAVE* # PASA_UPDATE: g3247.t1, single gene model update, valid-1, status:[pasa:asmbl_6996,status:3], valid-1 NODE_411_length_24373_cov_41.2876 . gene 586 2149 . - . ID=g3247;Name=g3247.t1 NODE_411_length_24373_cov_41.2876 . mRNA 586 2149 . - . ID=g3247.t1;Parent=g3247;Name=g3247.t1 NODE_411_length_24373_cov_41.2876 . five_prime_UTR 2102 2149 . - . ID=g3247.t1.utr5p1;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . exon 1930 2149 . - . ID=g3247.t1.exon1;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . CDS 1930 2101 . - 0 ID=cds.g3247.t1;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . exon 1356 1490 . - . ID=g3247.t1.exon2;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . CDS 1356 1490 . - 2 ID=cds.g3247.t1;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . exon 586 1108 . - . ID=g3247.t1.exon3;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . CDS 996 1108 . - 2 ID=cds.g3247.t1;Parent=g3247.t1 NODE_411_length_24373_cov_41.2876 . three_prime_UTR 586 995 . - . ID=g3247.t1.utr3p1;Parent=g3247.t1 #PROT g3247.t1 g3247 MLRNGLVRTAMQLRAAAAEVSGVVSRPKRFLENPGMAPLRQKEKGPWTALSKDEQLTLYRASYIVSRTEALLVNKNEWKYIAGNVFFALALSTLLFAGSRKLASPAPVTLSTEWKQAELDRQRRENANPVFGINADKYK* # ORIGINAL: g4945.t1 original gene structure, not modified by PASA NODE_3903_length_2539_cov_34.1627 AUGUSTUS gene 321 2400 . + . ID=g4945;Name=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS mRNA 321 2400 . + . ID=g4945.t1;Parent=g4945;Name=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS exon 321 488 . + . ID=g4945.t1.exon1;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS CDS 321 488 . + 0 ID=cds.g4945.t1;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS exon 651 734 . + . ID=g4945.t1.exon2;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS CDS 651 734 . + 0 ID=cds.g4945.t1;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS exon 951 2102 . + . ID=g4945.t1.exon3;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS CDS 951 2102 . + 0 ID=cds.g4945.t1;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS exon 2255 2400 . + . ID=g4945.t1.exon4;Parent=g4945.t1 NODE_3903_length_2539_cov_34.1627 AUGUSTUS CDS 2255 2400 . + 0 ID=cds.g4945.t1;Parent=g4945.t1 #PROT g4945.t1 g4945 DTTRLHYEPAELKAFEGIECEWPLFYIYLWLEALMLEDSTAAAKYRALVQPLLLDRGDGIPLVPRLYFVPRENVDQEKREKHSQRRLPGDHIPFVWGQSLLYMCMLLDEQLLSPASIDPIGRRLPSAMRPAPNTRHSAFNAATRSDLVVQIALFAESERLQSDLATYGIPTQTPSEISPIVLCAPSGLVEVYKGLGANDKLHLGGRPPRPCGSLATSKVYSIRGQTAVFYPIILDNSDFYLSLDQLLLIDTIKSELLFIRNHWNIVGRPTVCILLREKIVRTSRGSRHLLELMASLNRGYCNDVRVRVGRLQELMYSSCIEHLDFVKLDATVPLAPITDTEAPTGNVRRLRSAAVGMSTSGSGAASAMGLPTSAGPSAFSSVASLPLFSQGAEKKATAFERRQSLSGGQADGALLDAVNPPTRSPKRGTAEGDGPDLGALNAQFGVAEATYSHADWTMDALLERLKSKDSVDLAEITSILRTMLSRHDMNFVCLPPDGTVSVLLEEVYERAAVNQR # ORIGINAL: g13732.t1 original gene structure, not modified by PASA NODE_3528_length_3268_cov_27.3667 AUGUSTUS gene 530 1467 . - . ID=g13732;Name=g13732.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS mRNA 530 1467 . - . ID=g13732.t1;Parent=g13732;Name=g13732.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS exon 893 1467 . - . ID=g13732.t1.exon1;Parent=g13732.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS CDS 893 1467 . - 0 ID=cds.g13732.t1;Parent=g13732.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS exon 530 683 . - . ID=g13732.t1.exon2;Parent=g13732.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS CDS 530 683 . - 1 ID=cds.g13732.t1;Parent=g13732.t1 #PROT g13732.t1 g13732 MADENEPQLLVPAGDISPGLAGVRPITASGGSSTPLSRCASAGSLVADANRGQLSTVTDRDVRTVGGRAVRLHSRKRAKGKQQTETNGSSNSEMIIEFLSQQEDRERERERNLDREHERERERIYERERDRDREREQRDRDRDRERVAVTPMLIADGHIVKALELVQTSTQFTREEMRRAFQVLQNDRAALIRAQWATYAVHIAFAISSRKAFTADFCSFVGGAYRPLGSTISQIVNSVVII* # ORIGINAL: g13733.t1 original gene structure, not modified by PASA NODE_3528_length_3268_cov_27.3667 AUGUSTUS gene 1558 2291 . - . ID=g13733;Name=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS mRNA 1558 2291 . - . ID=g13733.t1;Parent=g13733;Name=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS exon 2280 2291 . - . ID=g13733.t1.exon1;Parent=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS CDS 2280 2291 . - 0 ID=cds.g13733.t1;Parent=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS exon 1829 1942 . - . ID=g13733.t1.exon2;Parent=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS CDS 1829 1942 . - 0 ID=cds.g13733.t1;Parent=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS exon 1558 1731 . - . ID=g13733.t1.exon3;Parent=g13733.t1 NODE_3528_length_3268_cov_27.3667 AUGUSTUS CDS 1558 1731 . - 0 ID=cds.g13733.t1;Parent=g13733.t1 #PROT g13733.t1 g13733 MFDGIKGHFKELLRLKERSGWGWDAVNFEILNEDEIWEEEIKAHPKAVYWNGRACLNFPRLFEMLSTVFATTAFALSASESAELSIENRKNKVAAVAQR* # ORIGINAL: g4173.t1 original gene structure, not modified by PASA NODE_2470_length_6160_cov_42.5348 AUGUSTUS gene 17 4138 . + . ID=g4173;Name=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS mRNA 17 4138 . + . ID=g4173.t1;Parent=g4173;Name=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 17 327 . + . ID=g4173.t1.exon1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 17 327 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 652 704 . + . ID=g4173.t1.exon2;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 652 704 . + 1 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 901 1064 . + . ID=g4173.t1.exon3;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 901 1064 . + 2 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 1376 1405 . + . ID=g4173.t1.exon4;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 1376 1405 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 1720 1830 . + . ID=g4173.t1.exon5;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 1720 1830 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 2045 2143 . + . ID=g4173.t1.exon6;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 2045 2143 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 2415 2486 . + . ID=g4173.t1.exon7;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 2415 2486 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 2698 2876 . + . ID=g4173.t1.exon8;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 2698 2876 . + 0 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 3093 3205 . + . ID=g4173.t1.exon9;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 3093 3205 . + 1 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 3365 3463 . + . ID=g4173.t1.exon10;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 3365 3463 . + 2 ID=cds.g4173.t1;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS exon 3810 4138 . + . ID=g4173.t1.exon11;Parent=g4173.t1 NODE_2470_length_6160_cov_42.5348 AUGUSTUS CDS 3810 4138 . + 2 ID=cds.g4173.t1;Parent=g4173.t1 #PROT g4173.t1 g4173 MGTFKRAVIATESQLLILKAQLVREGENATRDTADMYATSLIGEAGKAIIESTVSFSSLLVAAAPGNYKVVISPSTSAYNATSVDFNLYLPLSLMACIKGKQLLYVDAYKAPACVAVASSSSVNLPAIIVPIVCGFALIVVGLLWWYRRRERAILASERKWLIKSSELEIHNNIGHGAWGDVYSGKFRGTTVAIKAIRDSIPLPDDQTAATMRASDGGGSIFKTVSKKSQSKMRISNLFKSTKFMESENERKSRKVVQHQFVEEIQMMCGLRHPNIVLFMGASLDGNVKYLVLEYMGNGSLTDLYLSESPFEWSQRLSCMRDTAQGMVYLHSHDPPIIHRDLKSMNLLLDDSYKVKVADFGLAVLGEEPKKKKDVAEDSDMNLTGSLLWMAPELITEQSLHNEKTDVWAFGIILAEVASRKLPWADNDFDSSMPVMLLRLSEGQRPGLGAALLPSGFAEFFDSCTSINPDKRPAFSSVLKMLNDIDTTTMVAPPVADATGQTQSVAAASEPVTAKANGH* # PASA_UPDATE: g4174.t1, single gene model update, valid-1, status:[pasa:asmbl_4387,status:12], valid-1 NODE_2470_length_6160_cov_42.5348 . gene 5178 5898 . - . ID=g4174;Name=g4174.t1 NODE_2470_length_6160_cov_42.5348 . mRNA 5178 5898 . - . ID=g4174.t1;Parent=g4174;Name=g4174.t1 NODE_2470_length_6160_cov_42.5348 . five_prime_UTR 5898 5898 . - . ID=g4174.t1.utr5p1;Parent=g4174.t1 NODE_2470_length_6160_cov_42.5348 . exon 5670 5898 . - . ID=g4174.t1.exon1;Parent=g4174.t1 NODE_2470_length_6160_cov_42.5348 . CDS 5670 5897 . - 0 ID=cds.g4174.t1;Parent=g4174.t1;5_prime_partial=true NODE_2470_length_6160_cov_42.5348 . exon 5178 5489 . - . ID=g4174.t1.exon2;Parent=g4174.t1 NODE_2470_length_6160_cov_42.5348 . CDS 5178 5489 . - 0 ID=cds.g4174.t1;Parent=g4174.t1 #PROT g4174.t1 g4174 CDQSTGIDSACVQESEAQTESVRIAESACAVEEGTSTDGFQLADDGVQTSTNECADAAVQASQHVQSAAVQTDPPEIKLADGSSMPGVIRDAEDADGHVGSSRAPKPQPAPPSLPPKPPSPTRQSAWKEPDGHPPRGDDAEDDDDASGFGCCGFWVVSKATRMRKKEERKARRLKALKK* # ORIGINAL: g12640.t1 original gene structure, not modified by PASA NODE_2838_length_5008_cov_85.8159 AUGUSTUS gene 4462 4870 . - . ID=g12640;Name=g12640.t1 NODE_2838_length_5008_cov_85.8159 AUGUSTUS mRNA 4462 4870 . - . ID=g12640.t1;Parent=g12640;Name=g12640.t1 NODE_2838_length_5008_cov_85.8159 AUGUSTUS exon 4768 4870 . - . ID=g12640.t1.exon1;Parent=g12640.t1 NODE_2838_length_5008_cov_85.8159 AUGUSTUS CDS 4768 4870 . - 0 ID=cds.g12640.t1;Parent=g12640.t1 NODE_2838_length_5008_cov_85.8159 AUGUSTUS exon 4462 4577 . - . ID=g12640.t1.exon2;Parent=g12640.t1 NODE_2838_length_5008_cov_85.8159 AUGUSTUS CDS 4462 4577 . - 2 ID=cds.g12640.t1;Parent=g12640.t1 #PROT g12640.t1 g12640 EVHILHKYDADFYGEELSIVALGYIRPEQNFTSLESLVEAIQNDIQVASEALDLDDFKKHSEDDFFKGSQSA* # PASA_UPDATE: g12639.t1, single gene model update, valid-1, status:[pasa:asmbl_5096,status:12],[pasa:asmbl_5097,status:12], valid-1 NODE_2838_length_5008_cov_85.8159 . gene 118 3701 . + . ID=g12639;Name=g12639.t1 NODE_2838_length_5008_cov_85.8159 . mRNA 118 3701 . + . ID=g12639.t1;Parent=g12639;Name=g12639.t1 NODE_2838_length_5008_cov_85.8159 . five_prime_UTR 118 119 . + . ID=g12639.t1.utr5p1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 118 250 . + . ID=g12639.t1.exon1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 120 250 . + 0 ID=cds.g12639.t1;Parent=g12639.t1;5_prime_partial=true NODE_2838_length_5008_cov_85.8159 . exon 448 614 . + . ID=g12639.t1.exon2;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 448 614 . + 1 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 937 1359 . + . ID=g12639.t1.exon3;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 937 1359 . + 2 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 1599 1793 . + . ID=g12639.t1.exon4;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 1599 1793 . + 2 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 1935 2485 . + . ID=g12639.t1.exon5;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 1935 2485 . + 2 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 2816 2935 . + . ID=g12639.t1.exon6;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 2816 2935 . + 0 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . exon 3243 3701 . + . ID=g12639.t1.exon7;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . CDS 3243 3542 . + 0 ID=cds.g12639.t1;Parent=g12639.t1 NODE_2838_length_5008_cov_85.8159 . three_prime_UTR 3543 3701 . + . ID=g12639.t1.utr3p1;Parent=g12639.t1 #PROT g12639.t1 g12639 SMHWTSLSTTNTPFGRCFHASAIVGSKLYVFGGVTSQIISDDLWTLDLNTRVWQLVSPSGNVPPPLTGPAMAAVNSTLYLFGGLKVNSAINSVVFAFDTASQQWRSIAASGTAPNPAYFASAAVVQDFRIILTGGLTKDGPSSTTAYFSTVRKQWQYLSGAATPALSSSLPRSMQLHSVLSFVPSSNAGGCVYGPAPFASVCNHASGKMVVLFGGFVSAGLSADMLVLRPAFEPAVSSGGGTTTQSSSNKDYVVGVAVAVPIGGIAIILCVVVVVLMRRKRALERMAFDWQIDPEEIEWGDKIGQGTYGNVYKAVYRSTNVAVKTLIMAEDAVERIRQAQQQSDNPPSTNLNTVEKTSGQWTASDHRKAGGLMALKNRILASVLKISSSGKNKAMTQKDMKHLSDFVNEVQLMLKLRHPNVILMMGACLKTPDIYICMELCRGGSLYDLYTDTKINMNWVLRTRVLLDAARGMSYLHSAKPPIIHRDLKSPNILLDENLKAKITDFGLSTMKLFHDNKKEGAVGSLAWMAPEGIRGEGQDEKSDSYSFGVVISEVAGRSLPYRHENALSIVSRVASGELRPSVPESTPPAIKQLYLSCVSHDPKDRPTLVGIMEELTVLQRDFRKRGM* # ORIGINAL: g4039.t1 original gene structure, not modified by PASA NODE_4045_length_2285_cov_79.609 AUGUSTUS gene 87 1352 . - . ID=g4039;Name=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS mRNA 87 1352 . - . ID=g4039.t1;Parent=g4039;Name=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS exon 1197 1352 . - . ID=g4039.t1.exon1;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS CDS 1197 1352 . - 0 ID=cds.g4039.t1;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS exon 796 901 . - . ID=g4039.t1.exon2;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS CDS 796 901 . - 0 ID=cds.g4039.t1;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS exon 482 567 . - . ID=g4039.t1.exon3;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS CDS 482 567 . - 2 ID=cds.g4039.t1;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS exon 87 179 . - . ID=g4039.t1.exon4;Parent=g4039.t1 NODE_4045_length_2285_cov_79.609 AUGUSTUS CDS 87 179 . - 0 ID=cds.g4039.t1;Parent=g4039.t1 #PROT g4039.t1 g4039 MRDLVKQGVRSVILTSGTLSPLDTFATELQLKFPITLENPHVIQSRQARDGCVWVGVLPKGPSGVSLNSSYRTRGDQSYQQELGNAIVNFSRSVPDGLLVFFPSYSVLSTCVAAWQERSAMGKNVWERLSQHKTPIVEPRDKAGFNA # ORIGINAL: g2745.t1 original gene structure, not modified by PASA NODE_7906_length_399_cov_68.3148_potentialcontaminant AUGUSTUS gene 2 399 . + . ID=g2745;Name=g2745.t1 NODE_7906_length_399_cov_68.3148_potentialcontaminant AUGUSTUS mRNA 2 399 . + . ID=g2745.t1;Parent=g2745;Name=g2745.t1 NODE_7906_length_399_cov_68.3148_potentialcontaminant AUGUSTUS exon 2 399 . + . ID=g2745.t1.exon1;Parent=g2745.t1 NODE_7906_length_399_cov_68.3148_potentialcontaminant AUGUSTUS CDS 2 399 . + 0 ID=cds.g2745.t1;Parent=g2745.t1 #PROT g2745.t1 g2745 SGQVELLDAMHPGASAAVEDDSDTDAIRDDGNDAICGDDGDDGGDRDNDGSDGGDRHSDGDDVSDSDNDGNDGSDSDLFPVHRVYSFEEEGSDDDSHVTVDAHGVVGKDMQPPPSRSLDVETLSEEDGSVGL # ORIGINAL: g3986.t1 original gene structure, not modified by PASA NODE_983_length_15092_cov_41.6056 AUGUSTUS gene 2 7390 . + . ID=g3986;Name=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS mRNA 2 7390 . + . ID=g3986.t1;Parent=g3986;Name=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 2 443 . + . ID=g3986.t1.exon1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 2 443 . + 1 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 682 969 . + . ID=g3986.t1.exon2;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 682 969 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 1218 1424 . + . ID=g3986.t1.exon3;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 1218 1424 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 1638 2513 . + . ID=g3986.t1.exon4;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 1638 2513 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 2713 3774 . + . ID=g3986.t1.exon5;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 2713 3774 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 3982 4215 . + . ID=g3986.t1.exon6;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 3982 4215 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 4433 7390 . + . ID=g3986.t1.exon7;Parent=g3986.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 4433 7390 . + 0 ID=cds.g3986.t1;Parent=g3986.t1 #PROT g3986.t1 g3986 PSTKQAVTKAKLGYDPLEVDPEDMCRMAAEDPQTLANYSVSDAVATYYLYMKYVHPFIFSMCTIIPMEPDEVLRKGSGTLCETLLMVQSYRANIIMPNKQEQELNKMFNGHLLDSETYVGGHVEALESGVFRSDLEFRFRLVPEAFQGLMDSVERTLKYTLEAEHKVPLDTVTNLDDVCGKICEQLAVLRDHPYRVENPLIYHLDVGAMYPNIILTNRLQPSSVVDEATCAGCDFNTPESQCQRKMSWAWRGEHLPAKRNEYEMVKLQLESERLPSKEPGEPPRSFHELPAEEQAALLKKRLSDYCRKVYKKVHETKIEERESTVCMRENPFYVDTVRAFRDRRYKFKNDCKVWKSNLDSALRDKRMADVEKARNMLVLLDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCYTGANIITKARELVEQIGRPLELDTDGIWCMLPASFPENFEIRTSDPKRSKVVISYPGAMLNVLVADGFTNDQYQTLEDPATLKYDMRSENSIFFEVDGPYRAMILPASKEEDKKLKKRYAVFHEDGTLAELKGFEVKRRGELKLIKIFQSQVFETFLKGKTLEECYDSVGGVANHWLDVLYSKAVDMQDEELFELISENRSMSRTLEDYGAQKSTSISTARRLAEFLGDEMVKDKGLNCRFIISKKPEGSPVTERAVPVDIFNAEPGVRKHFLRRWLKCPDSAELDIRTVLDWEYYIERLGSAIQKIITIPAAMQRVLNPVPRVRHPDWLHKRLAEKDDTFKQMKISDLFGRGRAAGAEVARDAGEGDEGERAEENSRDSSESDPLGSPSTVTMRDIEDAMGTKRNLMAGRPIVRRHKRTLQDVAEDEANARADTAYAADAHVKGNGKGKSTAVPAKGVAREESSRQMGPPPDANVDYPGWLAHMKKKWRLQRLERAERRQAGAAGAAAGINRGLGKNAGGLSSFFRKSAFAVMQRHWQIVQISETDVAGEFQLWALVDGDMHRLRLSVPRRFYVNSRTSDPSGAWPRVSRVLPRSQPAYYLYEFNMPEARYQERAKELQAFFTHPDIEGVYELKVPLQFRALVQLGCVSKVRSSVAGGSQKKDHFDLEDVEFKTTAECGYLPPGSVRYVFVHHSRTDTRGIIGVFTADANGEQQRGHVIVVDPFRQDQMPNLSRLYRDQRAQRLATVVELTSNPEEEAAAAATLPAETAEFDVRHVTSGAQAMRALHRVLADIRENARGPPCVVVLQSPLSHAQLSEEVGSLADMPVIHLPANDKDNAYPALDWQRHAARRMVQHFLVMRQWLNDQLTLARYAHVPVGNLPADHPVFVSDIFFARHLARQGHLLWLSHSDRPDLGGKEEDDNRLLVDGDDGMACETSHPGEYGSVCVELVIASLAVNTVLQSSHVNDAEGGAGDAAAFDAAPAAISIDGHLGGAGSGVITALSAFDEAAQCAPAFRVLKGMVQGWLREVTQNRNPYADGLLVHFYRWLRSSSSRLFDPAMARMVHAMMRKLFVQLLAEFRRLGSGIVYANFGRLIISTKKASKADAEAYVAYILKSIRSRDLFGTIAIEPTAFWDELLFMDPANYGGVKAIDENEAAEIASQAHVNVDDTDSENDADRMDVDDSDDDADLLDPFGERRAPKAKPKAKRRRLRRVGEGDDDGDDDGSDEDDAEEEKEANKKRAKKHSQKSIGGSQAVVAKPKRATVEMHWNMCDYLPAAIQKYFQLVVAEYIYKVYEYRRDRRLARGGAPTPMRPRKRPAASDLTATAFGSRPPGVGDADNSDEDAKESGKKGGDVDDSVAHARGLIKTYLSQRLFKIIPDIQRALAGTDGAGEFPQLAGSHLHMSSPALEFSKFVCQTLSLDARITSEVAALRKNLLRLVGVREFGAEAKFADPCLSFTLTEVICSYCNACRDLDLCRDPTLLNDGQPWECPECKHEYDRAAIEHSLVEIAQRRSVAFQLQDLRCEKCRDVRADNIAPYCKCSGMFSNSIRQSHFATRMRTLWNIAKYHRLELLGEIVAWTMQANGCTFDEAGNVALPAHLVSR* # ORIGINAL: g3987.t1 original gene structure, not modified by PASA NODE_983_length_15092_cov_41.6056 AUGUSTUS gene 7849 8526 . - . ID=g3987;Name=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS mRNA 7849 8526 . - . ID=g3987.t1;Parent=g3987;Name=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 8479 8526 . - . ID=g3987.t1.exon1;Parent=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 8479 8526 . - 0 ID=cds.g3987.t1;Parent=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 8204 8344 . - . ID=g3987.t1.exon2;Parent=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 8204 8344 . - 0 ID=cds.g3987.t1;Parent=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS exon 7849 7956 . - . ID=g3987.t1.exon3;Parent=g3987.t1 NODE_983_length_15092_cov_41.6056 AUGUSTUS CDS 7849 7956 . - 0 ID=cds.g3987.t1;Parent=g3987.t1 #PROT g3987.t1 g3987 MRVGFVRCDPQEVAIQGLRTLGAAGTRLLAPFFGTTGNSGGAENSVAARYVVPEDLLALLSLQEFTKWEPPAFAVAILSHIWSGEVEKNKGRLAGKAH* # PASA_UPDATE: g3988.t1, single gene model update, valid-1, status:[pasa:asmbl_10223,status:12], valid-1 NODE_983_length_15092_cov_41.6056 . gene 9518 14908 . + . ID=g3988;Name=g3988.t1 NODE_983_length_15092_cov_41.6056 . mRNA 9518 14908 . + . ID=g3988.t1;Parent=g3988;Name=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 9518 9651 . + . ID=g3988.t1.exon1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 9518 9651 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 9798 10044 . + . ID=g3988.t1.exon2;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 9798 10044 . + 1 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 10205 10294 . + . ID=g3988.t1.exon3;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 10205 10294 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 10428 10603 . + . ID=g3988.t1.exon4;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 10428 10603 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 10782 10953 . + . ID=g3988.t1.exon5;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 10782 10953 . + 1 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 11166 11292 . + . ID=g3988.t1.exon6;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 11166 11292 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 11567 11670 . + . ID=g3988.t1.exon7;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 11567 11670 . + 2 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 11882 12008 . + . ID=g3988.t1.exon8;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 11882 12008 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 12342 12397 . + . ID=g3988.t1.exon9;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 12342 12397 . + 2 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 12584 12710 . + . ID=g3988.t1.exon10;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 12584 12710 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 13041 13178 . + . ID=g3988.t1.exon11;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 13041 13178 . + 2 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 13354 13477 . + . ID=g3988.t1.exon12;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 13354 13477 . + 2 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 13721 13872 . + . ID=g3988.t1.exon13;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 13721 13872 . + 1 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 14073 14371 . + . ID=g3988.t1.exon14;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 14073 14371 . + 2 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 14526 14651 . + . ID=g3988.t1.exon15;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 14526 14651 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . exon 14750 14908 . + . ID=g3988.t1.exon16;Parent=g3988.t1 NODE_983_length_15092_cov_41.6056 . CDS 14750 14908 . + 0 ID=cds.g3988.t1;Parent=g3988.t1 #PROT g3988.t1 g3988 MAYKKVSVDSFFEASFPELAFYQASGCGAPDLTGTTMASLAKKKGPIESGEVDYVALYSPLPTFAHLYAWPFAILYSAYVYVYLLHGTEEDADLYYFALGALLLVHLLTYLSTIWSVHVRCFMTCKSASDPLTAPLVKVVPIVHHGPTELLPIRHDKQFGTVWFNFQKTKYIFDVDRKVFRQVEFPVDLALGSYTKAAGYEEADVEPSMRKYGPNIFDIPVPTFRELYIEQATAPFFVFQVFCVGLWMLDEYWYYSLFTLFMLVLFEATVVKQRLRNLNELRQMRLKPYMINVYRSRKWRKLLTSELLPGDIISIVRGENTPVPCDALLIEGSCVVNESMLTGESVPQMKESIAAHDPCNTLDISGGGKVHVIFGGTKVVQATPPDKASPIRSPDGGCIAYVLRTGFNTAQGKLVRTILFSTERVTANTLESFFFIVFLLIFAIAASSYVWIHGSVDGKRSRNKLLLECVLIVTSVVPPELPMELSLAVNQSLIALARLAIFCTEPFRIPSGGKVEVCCFDKTGTLTSNDLIIDGLAGLSDTDELIKLEAAPDAAAHVIASCHSLAVIDESVCGDPMEKAALAGINWGITKGDVAVPKKGKRQSVKILHRFHFSSALKRMSVVATVEVPETGSVPAVYRHVVTVKGAPETVEGMLSTVPANYEKTHRLHARKGARVLALAYKYLDSMESSQARAMTRDQAESGLTFAGFLVISCPLRPDSASTMAAIKNSSHKVVMITGDNPLTACHVAEALAMITKPPLVIGPGDAFGAEEGKGNNLPNGFCCV* # PASA_UPDATE: g6569.t1, single gene model update, valid-1, status:[pasa:asmbl_9816,status:3], valid-1 NODE_882_length_16290_cov_49.7436 . gene 10432 11989 . - . ID=g6569;Name=g6569.t1 NODE_882_length_16290_cov_49.7436 . mRNA 10432 11989 . - . ID=g6569.t1;Parent=g6569;Name=g6569.t1 NODE_882_length_16290_cov_49.7436 . five_prime_UTR 11862 11989 . - . ID=g6569.t1.utr5p1;Parent=g6569.t1 NODE_882_length_16290_cov_49.7436 . exon 10948 11989 . - . ID=g6569.t1.exon1;Parent=g6569.t1 NODE_882_length_16290_cov_49.7436 . CDS 10948 11861 . - 0 ID=cds.g6569.t1;Parent=g6569.t1 NODE_882_length_16290_cov_49.7436 . exon 10432 10621 . - . ID=g6569.t1.exon2;Parent=g6569.t1 NODE_882_length_16290_cov_49.7436 . CDS 10477 10621 . - 1 ID=cds.g6569.t1;Parent=g6569.t1 NODE_882_length_16290_cov_49.7436 . three_prime_UTR 10432 10476 . - . ID=g6569.t1.utr3p1;Parent=g6569.t1 #PROT g6569.t1 g6569 MVRLCVSCGTARAVLKRPKTGQPFCKECFFAAFENEVHRTITSHALFTRGEKVAIAASGGKDSTVLAYVLSTLNKRYDYGVDMCLLSIDEGITGYRDDSLDSVRRNREQFGIPLLVVSYRELYGWTMDEIVKEVGLKNNCTFCGVFRRQALDRGAVRLGVDRIVTGHNADDIAETVLMNVLRGDVARLRRCTAITTGAEGALPRSKPFKFTYEKEIVMYAYFRKLDYFSTECIYAPNAYRGHARAFLKDLESIRPSAIVDIIHSGEAIVFADDVKMPSQGVCTRCGYISSQALCKACVLLEGLNRGLPKLGISKTNKADRLRKSAADATAAGAAPDGVSVGAPLAGEGVQAT* # ORIGINAL: g6567.t1 original gene structure, not modified by PASA NODE_882_length_16290_cov_49.7436 AUGUSTUS gene 114 7551 . - . ID=g6567;Name=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS mRNA 114 7551 . - . ID=g6567.t1;Parent=g6567;Name=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 7304 7551 . - . ID=g6567.t1.exon1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 7304 7551 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 6844 7073 . - . ID=g6567.t1.exon2;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 6844 7073 . - 1 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 5800 6704 . - . ID=g6567.t1.exon3;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 5800 6704 . - 2 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 5053 5703 . - . ID=g6567.t1.exon4;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 5053 5703 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 4515 4695 . - . ID=g6567.t1.exon5;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 4515 4695 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 4216 4319 . - . ID=g6567.t1.exon6;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 4216 4319 . - 2 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 3817 3901 . - . ID=g6567.t1.exon7;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 3817 3901 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 3516 3661 . - . ID=g6567.t1.exon8;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 3516 3661 . - 2 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 2623 3217 . - . ID=g6567.t1.exon9;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 2623 3217 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 2361 2436 . - . ID=g6567.t1.exon10;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 2361 2436 . - 2 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 1345 2014 . - . ID=g6567.t1.exon11;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 1345 2014 . - 1 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 1214 1237 . - . ID=g6567.t1.exon12;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 1214 1237 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS exon 114 686 . - . ID=g6567.t1.exon13;Parent=g6567.t1 NODE_882_length_16290_cov_49.7436 AUGUSTUS CDS 114 686 . - 0 ID=cds.g6567.t1;Parent=g6567.t1 #PROT g6567.t1 g6567 MPYAARTDVAPRRLMHNGGLWFYCALFAIHAVTTHRLVLAQPLVGGAGYCLNFKTSDAFVSMSDSQTFTGFPTDELTVEYWAKFEHDFKFKGSRQYTVISIASPAVHTPENKTVLDDNVVQWSTFGSAMKVWIMPQATGGKNLDVGNGAPLEYSAWHHWALTFRKSTPTRNATVGFYYDGQQVFEGAVIEMNELEFPSQVSFVLGQDQDGVYSGFDPSQSMSGYVDELRVWSVFRTGDDIRARMNTTAAGSESGLWGYFPFDEGTGDVAVNRATNSPRAPDLRLGGVASSGTCGGVAKSSTHPLWALSEAPIIGGGSTNALATAAANTRVAIKASSGSSVRLGAVSASNCSGHVLLFRDGAGLQPLGDYADVAGGVFYVALSGGAPHPFPVCVLPFTAADGGGNTTGTVWVSENARPVVANLTLSLDEDSNEIVLSLSGVAMAPINEARVTRIPTVGTLYASFTIAHYWPQLDASYQRVNLIRNTTTPLRLSGAGVQYVPLPNSYGNPVDSFSFVVVDINGVASAEATIQIGLNAVDDLSIAGLNPYYLTFVELDHVLSLPGPDIASPANATLTFWLRIDPSSPAPTQTIFATVPSNGYQATVSSAGLLSVIAAGVTCVSVQLSAAAMSGHWRHLAFVRTSGAVAVYEGGSFLGAGYCASIGAVSRIDFGGFRGCLDEVTVFSNALSAAQLPTAVLSKTSALGPFPITSAWTLDEGQGVVAKCVVASGVCAWPASLGFGDLSRVPRWTQIPLRSSAEYASFPAFERSITTENEQSILRLGAFDVDSDKRILTTLVLTIPENGRLYQYNETAPNKRGAQIQPYLSWLNTLFPISLFPYKVAAVNATGGCCSESVFFSDANAAASRPCSWCERGDPTLSFSTQYDLATYGVYSLLYKQGRPYAYNADIVGRGYGDNPYSYSPMWTGDPTPGSPRECASGVRGSDRQNPFGWSCPLNTEAEFVDVGYERPVYLQSVQVYENYYPGSTVGISARPADSADWVPVYEGLPQTELYDAAGQLKESKYRVFEPAVCQTPFRVDALRIYRNNHDIPGWNEFESVVLVGTAAKKDGVVDDLQGRVVYVPPTDGSGDAIDRIEFRVTDCAFNQDRMSQLGTVIVSVRDVATPPVLHTRDGRTSLTTSLGSVVVEIVVTERDTNDTVRVFVSQTPRKGELTHGGAIVLSDILTTALSPAANSRFGGTALFSITYTAFGCGSDSFVLQAVDAAGNPSAHLPVSIAIPCPTNSNVARVVAPAVVGSILILIALVMSMWLYGRRREEELLKRERTWLIDYKTIGFLEQIGKGSFGVVYKRGSIVAVKTIDHKTSSHGSLGNTGGKKNVFGRLLGQLSTGTTRRASLRPMVASGVGLEVNAAAHSNTTTLGSTNDALSSSPGMQRAGASPGSLRAPTSPFSRSLHNTQVAPFKAILSPKPQAAKIATNSNESAVTTDAAATAGGGSSAEPVRPMTIDKAYWDAVEDFLVEIETTCKLRHPNVVLFMGACIQ # PASA_UPDATE: g6568.t1, single gene model update, valid-1, status:[pasa:asmbl_9817,status:3], valid-1 NODE_882_length_16290_cov_49.7436 . gene 8176 10092 . + . ID=g6568;Name=g6568.t1 NODE_882_length_16290_cov_49.7436 . mRNA 8176 10092 . + . ID=g6568.t1;Parent=g6568;Name=g6568.t1 NODE_882_length_16290_cov_49.7436 . five_prime_UTR 8176 8312 . + . ID=g6568.t1.utr5p1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . exon 8176 8408 . + . ID=g6568.t1.exon1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . CDS 8313 8408 . + 0 ID=cds.g6568.t1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . exon 8661 8952 . + . ID=g6568.t1.exon2;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . CDS 8661 8952 . + 0 ID=cds.g6568.t1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . exon 9176 9249 . + . ID=g6568.t1.exon3;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . CDS 9176 9249 . + 2 ID=cds.g6568.t1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . exon 9826 10092 . + . ID=g6568.t1.exon4;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . CDS 9826 9918 . + 0 ID=cds.g6568.t1;Parent=g6568.t1 NODE_882_length_16290_cov_49.7436 . three_prime_UTR 9919 10092 . + . ID=g6568.t1.utr3p1;Parent=g6568.t1 #PROT g6568.t1 g6568 MEGVLHRFQAVHNKIASIPSATWLFCSFALQAITCSTLVIISGANVVDMATSDSPWYYAIQIPLTLSIAIAVRRLADEKRRARAVLVYVAFTFFLAMVAAVEFVLFANDREITTRKCRNSVTRFNFTLTESECSTLQDDQATKIGRTAAYLVIQCICIHPSISYVMDVWSNDVTALNSHTAKLR* # PASA_UPDATE: g6660.t1, single gene model update, valid-1, status:[pasa:asmbl_6891,status:12], valid-1 NODE_4039_length_2298_cov_34.8174 . gene 274 2235 . - . ID=g6660;Name=g6660.t1 NODE_4039_length_2298_cov_34.8174 . mRNA 274 2235 . - . ID=g6660.t1;Parent=g6660;Name=g6660.t1 NODE_4039_length_2298_cov_34.8174 . five_prime_UTR 2229 2235 . - . ID=g6660.t1.utr5p1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . exon 2160 2235 . - . ID=g6660.t1.exon1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . CDS 2160 2228 . - 0 ID=cds.g6660.t1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . exon 1735 1828 . - . ID=g6660.t1.exon2;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . CDS 1735 1828 . - 0 ID=cds.g6660.t1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . exon 1380 1509 . - . ID=g6660.t1.exon3;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . CDS 1380 1509 . - 2 ID=cds.g6660.t1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . exon 930 1023 . - . ID=g6660.t1.exon4;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . CDS 930 1023 . - 1 ID=cds.g6660.t1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . exon 274 617 . - . ID=g6660.t1.exon5;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . CDS 387 617 . - 0 ID=cds.g6660.t1;Parent=g6660.t1 NODE_4039_length_2298_cov_34.8174 . three_prime_UTR 274 386 . - . ID=g6660.t1.utr3p1;Parent=g6660.t1 #PROT g6660.t1 g6660 MVASTVSSKLLKAMAHTEGFQFEETLTGFKWIGNKAIDLEKAGKKVIFAFEEAIGYMPGTVTCDKDGVHSSVVCAELISHLVESGKTAIDQLSAIYSKYGYFTTNNSYYICHSQPKIRAIFERLRKGEQYPAAAGPYKIVSVRDLTTGYDSTREDKKAVLPSSRSSQMITFAFESNAIVTLRTSGTEPKIKYYTEINGKADTLYA* # ORIGINAL: g9773.t1 original gene structure, not modified by PASA NODE_2975_length_4623_cov_40.3723 AUGUSTUS gene 3860 4493 . + . ID=g9773;Name=g9773.t1 NODE_2975_length_4623_cov_40.3723 AUGUSTUS mRNA 3860 4493 . + . ID=g9773.t1;Parent=g9773;Name=g9773.t1 NODE_2975_length_4623_cov_40.3723 AUGUSTUS exon 3860 3936 . + . ID=g9773.t1.exon1;Parent=g9773.t1 NODE_2975_length_4623_cov_40.3723 AUGUSTUS CDS 3860 3936 . + 0 ID=cds.g9773.t1;Parent=g9773.t1 NODE_2975_length_4623_cov_40.3723 AUGUSTUS exon 4101 4493 . + . ID=g9773.t1.exon2;Parent=g9773.t1 NODE_2975_length_4623_cov_40.3723 AUGUSTUS CDS 4101 4493 . + 1 ID=cds.g9773.t1;Parent=g9773.t1 #PROT g9773.t1 g9773 MPGKLSKVESYRLLGLPNNAHMDDVRSAYRKLALKHHPDKNDGSEESTVMFQHISAAYKCITQPGSEIDMDDFADHMSRAFRSRAQHCSCGHDHGDEDDYDDDDYDDDDGYGYDYGGDDDYFSDPLFAHFFGFRMHFGAPFGHPMFDGHGHSHSFS # PASA_UPDATE: g9772.t1, single gene model update, valid-1, status:[pasa:asmbl_5332,status:3], valid-1 NODE_2975_length_4623_cov_40.3723 . gene 107 3332 . - . ID=g9772;Name=g9772.t1 NODE_2975_length_4623_cov_40.3723 . mRNA 107 3332 . - . ID=g9772.t1;Parent=g9772;Name=g9772.t1 NODE_2975_length_4623_cov_40.3723 . five_prime_UTR 3152 3332 . - . ID=g9772.t1.utr5p1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 2943 3332 . - . ID=g9772.t1.exon1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 2943 3151 . - 0 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 2767 2820 . - . ID=g9772.t1.exon2;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 2767 2820 . - 1 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 2618 2672 . - . ID=g9772.t1.exon3;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 2618 2672 . - 1 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 1979 2203 . - . ID=g9772.t1.exon4;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 1979 2203 . - 0 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 1434 1613 . - . ID=g9772.t1.exon5;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 1434 1613 . - 0 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . exon 107 1147 . - . ID=g9772.t1.exon6;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . CDS 245 1147 . - 0 ID=cds.g9772.t1;Parent=g9772.t1 NODE_2975_length_4623_cov_40.3723 . three_prime_UTR 107 244 . - . ID=g9772.t1.utr3p1;Parent=g9772.t1 #PROT g9772.t1 g9772 MANSDTEGTKKGKGKKKGKKGKKGSDEQPGSGVRTEGTEAVPKPKTDLPKLVKAAKSAKAPFIESWLEFEIDARKKSIAGYRMRYTSLHEDNSRLSKELSQTQKETNLLMKKLLGKAEDKLHEMLAASESFQAKREQQSSETKEFGAAQEKELEALQRQIDELDRKRLAIEREIATLKEFKHTKHVENAAHMVTLEHSIKEWEVRHVDEKRNMALKFENAMVQIQQIADQKIDVLEETASLSVIEAMDEKCRRDIQDHAWLTHELSVHSDTLRRLEDQIAELERSNVDLLQGSFELSLDTMRWGNFSTYKKLDTEPVTLTLPPVPGTPPSSDATSPHAKEAHAAWQSPQIQQPQKSPRLGAGAAVALSSPWAPLGSVRMRPRPVSRTQPTPPWPTSIPFDEADGSEEDEAEREALDNSRALITHPLSQSHTHEYTHARAGHACPPLATILPPSAAATAQILLVSGHPAPANSGGEPGSSALVVSEGSAAPTPKTVGQVLRAAVSHGVRPSAALAPVVHVNSTQRRRQHGGELKAVDTQKTA* # PASA_UPDATE: g13328.t1, single gene model update, valid-1, status:[pasa:asmbl_3936,status:12], valid-1 NODE_2282_length_6885_cov_61.5568 . gene 4727 6520 . - . ID=g13328;Name=g13328.t1 NODE_2282_length_6885_cov_61.5568 . mRNA 4727 6520 . - . ID=g13328.t1;Parent=g13328;Name=g13328.t1 NODE_2282_length_6885_cov_61.5568 . five_prime_UTR 6391 6520 . - . ID=g13328.t1.utr5p1;Parent=g13328.t1 NODE_2282_length_6885_cov_61.5568 . exon 4727 6520 . - . ID=g13328.t1.exon1;Parent=g13328.t1 NODE_2282_length_6885_cov_61.5568 . CDS 5008 6390 . - 0 ID=cds.g13328.t1;Parent=g13328.t1 NODE_2282_length_6885_cov_61.5568 . three_prime_UTR 4727 5007 . - . ID=g13328.t1.utr3p1;Parent=g13328.t1 #PROT g13328.t1 g13328 MAVAKGSKAAANGQKASQAHPELEQEFGGAFGVACIMVFSHVLPYYLYISNFYYGGRVIYPDSLEDVGPWLARMLDHLVESALPTAYTVSIYLGFLAYESVLAMVLPGPTVAGLPIKTENGRCLPYYCNGLSAWYATLATVAGLHLSGVFRITEIFDNFGSLMTVSIIAGDVIAVLIYVSAFALGKAIRVTGNPIYDFFMGVYLNPRIGSLDIKMWAEIRVSWTILFFLTVSAAVKQYDVHGVVTTPMCFMIVAHFLYTNACQKGEECIPTTWDISYECFGWMLCYWNLAGVAFVYCFQSIFIYHRGPEFDLGLPYTVALFVTLFLAYYTWDTSNSQKNRFRMQRMGTAMERPWAFPQLPWGTLRGNVRSIKCENGGLLLTDGWYRYARKIHYTADTIMAITWGLSCGTTHVLPFFYAAFFSAMIYHRGSRDMERCARKYGKDWERYCETVPYLFIPYVY* # PASA_UPDATE: g13327.t1, single gene model update, valid-1, status:[pasa:asmbl_3935,status:3], valid-1 NODE_2282_length_6885_cov_61.5568 . gene 611 4264 . + . ID=g13327;Name=g13327.t1 NODE_2282_length_6885_cov_61.5568 . mRNA 611 4264 . + . ID=g13327.t1;Parent=g13327;Name=g13327.t1 NODE_2282_length_6885_cov_61.5568 . five_prime_UTR 611 758 . + . ID=g13327.t1.utr5p1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 611 950 . + . ID=g13327.t1.exon1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 759 950 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 1216 1307 . + . ID=g13327.t1.exon2;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 1216 1307 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 1504 1555 . + . ID=g13327.t1.exon3;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 1504 1555 . + 1 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 1907 2011 . + . ID=g13327.t1.exon4;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 1907 2011 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 2193 2352 . + . ID=g13327.t1.exon5;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 2193 2352 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 2526 2635 . + . ID=g13327.t1.exon6;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 2526 2635 . + 2 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 2936 3031 . + . ID=g13327.t1.exon7;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 2936 3031 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 3380 3440 . + . ID=g13327.t1.exon8;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 3380 3440 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 3635 3831 . + . ID=g13327.t1.exon9;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 3635 3831 . + 2 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . exon 3971 4264 . + . ID=g13327.t1.exon10;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . CDS 3971 4186 . + 0 ID=cds.g13327.t1;Parent=g13327.t1 NODE_2282_length_6885_cov_61.5568 . three_prime_UTR 4187 4264 . + . ID=g13327.t1.utr3p1;Parent=g13327.t1 #PROT g13327.t1 g13327 MESSSVHMADGCDGGVPASLECGVCCGLVADNRACPQCRKLFCGACISKWFESRKHDDQRVCPMCRCPASLSLYAHDDVRQALADSQEAECDFKCGYVVRWGDRERHYEECELLLLPCPYRGCHAFTPRRDFDLHVYDCNFRLQYAEAGNEPTAEASSPAAKFNPADAEDEDPKKAVRKTTVVVHLVRETDTLSGLAIKYGCASVDIRRLNRLPTENIHGHMRLLIPADPQLAAASEPTEADDAVLEALRRRRCIREFMRIAKVREACEAIAYLNLCDYDLNAAIAKHAEDEVWAHANPNARKNNDASRRNGKRPMPPRSQMPSTLSEFIDGLRGRARPMACHGCLADHSPADSRVHCSCCGLIFCSRCGPVLCDGRVSKRALGVTAPGAGDALVRACNRCVDAYGGRGATVCVGGPGDRRVVTDA* # ORIGINAL: g13326.t1 original gene structure, not modified by PASA NODE_2282_length_6885_cov_61.5568 AUGUSTUS gene 131 266 . - . ID=g13326;Name=g13326.t1 NODE_2282_length_6885_cov_61.5568 AUGUSTUS mRNA 131 266 . - . ID=g13326.t1;Parent=g13326;Name=g13326.t1 NODE_2282_length_6885_cov_61.5568 AUGUSTUS exon 131 266 . - . ID=g13326.t1.exon1;Parent=g13326.t1 NODE_2282_length_6885_cov_61.5568 AUGUSTUS CDS 131 266 . - 0 ID=cds.g13326.t1;Parent=g13326.t1 #PROT g13326.t1 g13326 MCIIFLHVGKAGDPYRLVLAANRDEFFARPSAHAHYWEEAPDILA # PASA_UPDATE: g1052.t1, single gene model update, valid-1, status:[pasa:asmbl_7426,status:3], valid-1 # PASA_UPDATE: g1052.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7427,status:12], valid-1 NODE_453_length_23440_cov_46.211 . gene 16001 22348 . + . ID=g1052;Name=g1052.t1 NODE_453_length_23440_cov_46.211 . mRNA 16001 22348 . + . ID=g1052.t1;Parent=g1052;Name=g1052.t1 NODE_453_length_23440_cov_46.211 . five_prime_UTR 16001 16123 . + . ID=g1052.t1.utr5p1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 16001 16279 . + . ID=g1052.t1.exon1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 16124 16279 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 16455 16639 . + . ID=g1052.t1.exon2;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 16455 16639 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 16801 17000 . + . ID=g1052.t1.exon3;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 16801 17000 . + 1 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 17149 17304 . + . ID=g1052.t1.exon4;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 17149 17304 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 17440 17535 . + . ID=g1052.t1.exon5;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 17440 17535 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 17644 17969 . + . ID=g1052.t1.exon6;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 17644 17969 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 18146 18409 . + . ID=g1052.t1.exon7;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 18146 18409 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 18535 18733 . + . ID=g1052.t1.exon8;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 18535 18733 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 18824 19411 . + . ID=g1052.t1.exon9;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 18824 19411 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 19510 19727 . + . ID=g1052.t1.exon10;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 19510 19727 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 19898 20323 . + . ID=g1052.t1.exon11;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 19898 20323 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 20458 20537 . + . ID=g1052.t1.exon12;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 20458 20537 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 20756 20822 . + . ID=g1052.t1.exon13;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 20756 20822 . + 1 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 21036 21050 . + . ID=g1052.t1.exon14;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 21036 21050 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 21282 21476 . + . ID=g1052.t1.exon15;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 21282 21476 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 21584 21653 . + . ID=g1052.t1.exon16;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 21584 21653 . + 0 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . exon 21811 22348 . + . ID=g1052.t1.exon17;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . CDS 21811 22028 . + 2 ID=cds.g1052.t1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . three_prime_UTR 22029 22348 . + . ID=g1052.t1.utr3p1;Parent=g1052.t1 NODE_453_length_23440_cov_46.211 . mRNA 16001 20999 . + . ID=g1052.t1.1.5b6be70c;Parent=g1052;Name=g1052.t1 NODE_453_length_23440_cov_46.211 . five_prime_UTR 16001 16123 . + . ID=g1052.t1.1.5b6be70c.utr5p1;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 16001 16279 . + . ID=g1052.t1.1.5b6be70c.exon1;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 16124 16279 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 16455 16639 . + . ID=g1052.t1.1.5b6be70c.exon2;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 16455 16639 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 16801 17000 . + . ID=g1052.t1.1.5b6be70c.exon3;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 16801 17000 . + 1 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 17149 17304 . + . ID=g1052.t1.1.5b6be70c.exon4;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 17149 17304 . + 2 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 17440 17535 . + . ID=g1052.t1.1.5b6be70c.exon5;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 17440 17535 . + 2 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 17644 17969 . + . ID=g1052.t1.1.5b6be70c.exon6;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 17644 17969 . + 2 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 18146 18409 . + . ID=g1052.t1.1.5b6be70c.exon7;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 18146 18409 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 18535 18733 . + . ID=g1052.t1.1.5b6be70c.exon8;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 18535 18733 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 18824 19411 . + . ID=g1052.t1.1.5b6be70c.exon9;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 18824 19411 . + 2 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 19510 19727 . + . ID=g1052.t1.1.5b6be70c.exon10;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 19510 19727 . + 2 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 19898 20323 . + . ID=g1052.t1.1.5b6be70c.exon11;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 19898 20323 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . exon 20458 20999 . + . ID=g1052.t1.1.5b6be70c.exon12;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . CDS 20458 20541 . + 0 ID=cds.g1052.t1.1.5b6be70c;Parent=g1052.t1.1.5b6be70c NODE_453_length_23440_cov_46.211 . three_prime_UTR 20542 20999 . + . ID=g1052.t1.1.5b6be70c.utr3p1;Parent=g1052.t1.1.5b6be70c #PROT g1052.t1 g1052 MMNHALLSIAFALCVLSASVGHAEAAGKTFNLTILCSNNGNGFSVESKDSLGNAYGGIARMKTGIDQFRAAGNLVGGVLTLDSGSILGSTREFNNLLSDYYASLYAPLKYDYVSLGSGDFFQGTKEWKNFLVKTGFKAVVSNSDDRGLRYFGPNMLSYYVHTLTIGGVNVTIGVVGIAAEDFCTQTKCEFRIRTQNIVASLSPLVSMLRQDKGVDAVVLLSSPGMPIDQALSASINGIDIICGGKVYVTTAKAFPLPQIFPTPNGGKTYAVATFGSATSVGNFLFQFMNGVVYNVTGSEQRLFACANDSAPTAGCFPQDPAVKALMDAGAAQLKSQERLITILNPVPPRANIGLRLACRSAECELGNLLSDAQLEYMGGQCDYSLVNSGNFLSNMPSGAMTTTTIEGLIFAGNTISVVQVRGSSLIDAVQISVPRVGNPQFLQFSSGMRVTYDPSRPAGIQVVNMTLINDKGIYVPVDLNGIYYVCMPNFVRGGGDGYVMFRDEALDALDNGPIQLPALISFLTARNGTTYIPAVDGRITTSSDASLKPVVGKCLYQSTMSAQTGTFTDACGTVPRTQLAISLAVTPPRVNGTSPVLLRLTFSALSPAPDVVAIMDAARVNVLTVWVVGSGMQSGRMLGPAALPAQIYVFGNRTGISVTGGTSRSQLSFSYVALYSCPDGFQSWNGTCDPCPRNYYRAGSMSACAACALGYEATSMASTACVEGLATGSSSTNVGVIVGPVVGGLAAVLAGTIAAFMLISRKRRLASANITRRTFDIGELEILEHLCDGSFGSVSKARFRGTIVAVKQLKSAVGASANGTGDQVTAAATATMPAEIVSRLETARTMLMSAGQKDSAPRKSSFNLFARLSKNSQRSPIDNGSDVSWFDSKKQKENAADQKKRIDDFLHEIDLMCTLRHPRIVLFMGSVLENNNLMILQEYMEGGSLFQALEGKPNWSLKKRMQMAIDAAMGMEYLHRNEPPILHCDLKSMNLLLDVNHIVKVTDFGMSRMKLQNTNFYGLVGTISWAAPECFTAEEPYSTKSDVYSFAIILWELLTMKVPYEDEVKDLANPHMVMLQVFLHDMRPVIPGNTPPALSRLMRDGWALQSSARPSFTAVLQRLEEIKNALPDDDSWMTMETAIIGNKVTSPNIKRA* #PROT g1052.t1.1.5b6be70c g1052 MMNHALLSIAFALCVLSASVGHAEAAGKTFNLTILCSNNGNGFSVESKDSLGNAYGGIARMKTGIDQFRAAGNLVGGVLTLDSGSILGSTREFNNLLSDYYASLYAPLKYDYVSLGSGDFFQGTKEWKNFLVKTGFKAVVSNSDDRGLRYFGPNMLSYYVHTLTIGGVNVTIGVVGIAAEDFCTQTKCEFRIRTQNIVASLSPLVSMLRQDKGVDAVVLLSSPGMPIDQALSASINGIDIICGGKVYVTTAKAFPLPQIFPTPNGGKTYAVATFGSATSVGNFLFQFMNGVVYNVTGSEQRLFACANDSAPTAGCFPQDPAVKALMDAGAAQLKSQERLITILNPVPPRANIGLRLACRSAECELGNLLSDAQLEYMGGQCDYSLVNSGNFLSNMPSGAMTTTTIEGLIFAGNTISVVQVRGSSLIDAVQISVPRVGNPQFLQFSSGMRVTYDPSRPAGIQVVNMTLINDKGIYVPVDLNGIYYVCMPNFVRGGGDGYVMFRDEALDALDNGPIQLPALISFLTARNGTTYIPAVDGRITTSSDASLKPVVGKCLYQSTMSAQTGTFTDACGTVPRTQLAISLAVTPPRVNGTSPVLLRLTFSALSPAPDVVAIMDAARVNVLTVWVVGSGMQSGRMLGPAALPAQIYVFGNRTGISVTGGTSRSQLSFSYVALYSCPDGFQSWNGTCDPCPRNYYRAGSMSACAACALGYEATSMASTACVEGLATGSSSTNVGVIVGPVVGGLAAVLAGTIAAFMLISRKRRLASANITRRTFDIGELEILEHLCDGSFGSVSKARFRGTIVAVKQLKSAVGASANGTGDQVTAAATATMPAEIVSRLETARTMLMSAGQKDSAPRKSSFNLFARLSKNSQRSPIDNGSDVSWFDSKKQKENAADQKKRIDDFLHEIDLMCTLRHPRIVLFMGSVLENNNLMILQEYMEGGSLFQALEGKPNWSLKKRMQMAM* # PASA_UPDATE: g1050.t1, single gene model update, valid-1, status:[pasa:asmbl_7428,status:3], valid-1 NODE_453_length_23440_cov_46.211 . gene 8688 10675 . - . ID=g1050;Name=g1050.t1 NODE_453_length_23440_cov_46.211 . mRNA 8688 10675 . - . ID=g1050.t1;Parent=g1050;Name=g1050.t1 NODE_453_length_23440_cov_46.211 . five_prime_UTR 10558 10675 . - . ID=g1050.t1.utr5p1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 10506 10675 . - . ID=g1050.t1.exon1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 10506 10557 . - 0 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 10240 10378 . - . ID=g1050.t1.exon2;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 10240 10378 . - 2 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 10021 10105 . - . ID=g1050.t1.exon3;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 10021 10105 . - 1 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 9553 9820 . - . ID=g1050.t1.exon4;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 9553 9820 . - 0 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 9074 9194 . - . ID=g1050.t1.exon5;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 9074 9194 . - 2 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . exon 8688 8934 . - . ID=g1050.t1.exon6;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . CDS 8748 8934 . - 1 ID=cds.g1050.t1;Parent=g1050.t1 NODE_453_length_23440_cov_46.211 . three_prime_UTR 8688 8747 . - . ID=g1050.t1.utr3p1;Parent=g1050.t1 #PROT g1050.t1 g1050 MSTATRRRVGIVGYGHLGKYLADAVLKRPDDLELVFVWNRTVDRMRGAVPAECILENLDEFESRTVDLIVEVAHPDITAEYGARFLHAADYMIGSPTALADIALESRLREAASCNSGAHGMYVPSGALWGGPDIRKMADRRTLKALKITMKKHPLSFKLEGDLGVKCDASAAVSGETLLYEGPVRALCPLAPNNVNTMAAAAVAAHNLGFDGVVGCLISDPSLESHIVEVDVVGPGADPLPFSVRTVRTNPAKPGAVTGDATYASFLSSMLQAHGCGNGVHLC* # PASA_UPDATE: g1049.t1, single gene model update, valid-1, status:[pasa:asmbl_7423,status:3], valid-1 NODE_453_length_23440_cov_46.211 . gene 7674 8687 . + . ID=g1049;Name=g1049.t1 NODE_453_length_23440_cov_46.211 . mRNA 7674 8687 . + . ID=g1049.t1;Parent=g1049;Name=g1049.t1 NODE_453_length_23440_cov_46.211 . five_prime_UTR 7674 7763 . + . ID=g1049.t1.utr5p1;Parent=g1049.t1 NODE_453_length_23440_cov_46.211 . exon 7674 8687 . + . ID=g1049.t1.exon1;Parent=g1049.t1 NODE_453_length_23440_cov_46.211 . CDS 7764 8549 . + 0 ID=cds.g1049.t1;Parent=g1049.t1 NODE_453_length_23440_cov_46.211 . three_prime_UTR 8550 8687 . + . ID=g1049.t1.utr3p1;Parent=g1049.t1 #PROT g1049.t1 g1049 MRVSVLAAAVCALILAAAALPSRVHADVVPCGPTCGGGFCPEGLTCDRICVIAGCFERCKKPAEGIPAAPGTPAQLVFHVHRLASDGFTFSLHSLDTQIMTACQSVVFPTLNDTMNAIDAVKENAGAKRNWRASVLVDASAMCIAEADDANVHASHIQRLVSQYVGVAQVSFDDDVQTKGQNFAAKIECDVGYTGDECDECALGFKKLVDVPVCARASPSARAAQTDSCDTNVTCRGGLCPVGTACKRHCILNAGCADICL* # PASA_UPDATE: g1047.t1, single gene model update, valid-1, status:[pasa:asmbl_7421,status:12],[pasa:asmbl_7424,status:12], valid-1 NODE_453_length_23440_cov_46.211 . gene 193 5044 . + . ID=g1047;Name=g1047.t1 NODE_453_length_23440_cov_46.211 . mRNA 193 5044 . + . ID=g1047.t1;Parent=g1047;Name=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 193 376 . + . ID=g1047.t1.exon1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 193 376 . + 0 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 488 1843 . + . ID=g1047.t1.exon2;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 488 1843 . + 2 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 2095 2319 . + . ID=g1047.t1.exon3;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 2095 2319 . + 2 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 2533 2900 . + . ID=g1047.t1.exon4;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 2533 2900 . + 2 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 3080 3178 . + . ID=g1047.t1.exon5;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 3080 3178 . + 0 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 3335 3579 . + . ID=g1047.t1.exon6;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 3335 3579 . + 0 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 3702 3786 . + . ID=g1047.t1.exon7;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 3702 3786 . + 1 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 3932 4080 . + . ID=g1047.t1.exon8;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 3932 4080 . + 0 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 4284 4400 . + . ID=g1047.t1.exon9;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 4284 4400 . + 1 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . exon 4556 5044 . + . ID=g1047.t1.exon10;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . CDS 4556 4658 . + 1 ID=cds.g1047.t1;Parent=g1047.t1 NODE_453_length_23440_cov_46.211 . three_prime_UTR 4659 5044 . + . ID=g1047.t1.utr3p1;Parent=g1047.t1 #PROT g1047.t1 g1047 MGIRNMKSLLTTLRSSPQAYNGHDDAAMCLLRYGADITIPDSNGKTALDVARGPKMITFLKGIAATGFANFMFDRSLDGMRDDAALQARFDKMMAQKIRLLDDSNPNLADKDGSGKELAVYQGGNVGLDNSSAKIPAMESFLTMFNPTRRSRSKVELLIALAQQQAQNAQQQVHNAALQKLRDEELTKQQQAAAIDAIYTQTSVKTSPFMPANLNVAPYGTPMKPGEIPTATGNGRDPSYGAPSLQPQPQGQQFQVAMPSFGGGGGGGGAVGGDGQRSQMQMQQPQSMEDGQGGYYDEQGGDKGVALPKLNGGARHSSARGDGEHPGSATVHKTTSQGGRGVLPRVNGAGDGQSAGANPFPQVAGSSARRAAQGSAPNHSARVRELSLSGTGGGSASSHSSEQGIDPNHVTMSISRVSLDYFAGGLAPAPKGRGQSLALPSTKPGARRIQNIRPFGMDSIPSGSVPPGNPHQGMNGGYGGMNGMVGGMSGAPSRNGGAPNGSGGAYIAQQAQKPKSSYVDFQKRNNPRALPPPQQMQQQQTPDPSMFYDNGMEGEPLFDPNAPTIDIIDVDAPGLPPIKRQRSIALNIGQAMASAQSVMSPVTQIVQSPLIPPIGAGSYQQPPTPSTYPQSQPAYASQPAQQSQPQYNDSAVPKLSHDGEGELRRTHDKTHMGENGAPVSDDRFNFLSTSQEQSDIQWKKGYLLGRGAFGKVFCGLNKQTGELIAVKQIFLGGGQGNNKKDLKSQTAVYEREITLLKRLHHQNIVAYLGTRIDGNSLYIFMEFVSGGSIASMLSQFGAFEEEVIRHYLKQILDGVAYLHDNEVIHRDIKGANILVDTSGIIKLIDFGAAKQLCQHISHSNLKSLEGTPYWMAPEVVTESGYGRKSDIWSIGCVLYEMGTGSPPWAHMGPVSAIFQIGSGTEIPRLGDQFSAAAHDFLGLCLKRNPNERPFARELLYHSYVRDARHPRQRGMTGPPM* # PASA_UPDATE: g1048.t1, single gene model update, valid-1, status:[pasa:asmbl_7425,status:3], valid-1 NODE_453_length_23440_cov_46.211 . gene 5561 7642 . + . ID=g1048;Name=g1048.t1 NODE_453_length_23440_cov_46.211 . mRNA 5561 7642 . + . ID=g1048.t1;Parent=g1048;Name=g1048.t1 NODE_453_length_23440_cov_46.211 . five_prime_UTR 5561 5692 . + . ID=g1048.t1.utr5p1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 5561 5869 . + . ID=g1048.t1.exon1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 5693 5869 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 6010 6114 . + . ID=g1048.t1.exon2;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 6010 6114 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 6229 6279 . + . ID=g1048.t1.exon3;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 6229 6279 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 6512 6580 . + . ID=g1048.t1.exon4;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 6512 6580 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 6961 7101 . + . ID=g1048.t1.exon5;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 6961 7101 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . exon 7242 7642 . + . ID=g1048.t1.exon6;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . CDS 7242 7367 . + 0 ID=cds.g1048.t1;Parent=g1048.t1 NODE_453_length_23440_cov_46.211 . three_prime_UTR 7368 7642 . + . ID=g1048.t1.utr3p1;Parent=g1048.t1 #PROT g1048.t1 g1048 MPFLESIFGAKKTPQQLLRQHQRALTRAMRDLDKEKSKLEQQEKKLLSDIKKMAQGGQMDAAKIMAKDLVRTRRYVKKFIMMKAQIQAVSLKIQTLRSTQAMAEAMKGVTKAMKSMNARMNLPEIQKIMMEFEKESEIMDMKEEMMNDTIDDVMGDAEDDEESDLIVNKVLDEIGISLNQTLVDAPQTKTPAAAQPVAAGKAAVADSADADLQARLDNLRRD* # ORIGINAL: g1051.t1 original gene structure, not modified by PASA NODE_453_length_23440_cov_46.211 AUGUSTUS gene 11068 15102 . + . ID=g1051;Name=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS mRNA 11068 15102 . + . ID=g1051.t1;Parent=g1051;Name=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 11068 11709 . + . ID=g1051.t1.exon1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 11068 11709 . + 0 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 11908 11999 . + . ID=g1051.t1.exon2;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 11908 11999 . + 0 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 12263 12436 . + . ID=g1051.t1.exon3;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 12263 12436 . + 1 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 13026 13197 . + . ID=g1051.t1.exon4;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 13026 13197 . + 1 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 13541 13701 . + . ID=g1051.t1.exon5;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 13541 13701 . + 0 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 13894 14204 . + . ID=g1051.t1.exon6;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 13894 14204 . + 1 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 14721 14776 . + . ID=g1051.t1.exon7;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 14721 14776 . + 2 ID=cds.g1051.t1;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS exon 14908 15102 . + . ID=g1051.t1.exon8;Parent=g1051.t1 NODE_453_length_23440_cov_46.211 AUGUSTUS CDS 14908 15102 . + 0 ID=cds.g1051.t1;Parent=g1051.t1 #PROT g1051.t1 g1051 MDGGDLPHHDAVETVECVVHVSPAVVDVIPQETVGAVDESPGPANGVDAVDGADASDVTRIADNNENANNGAGASVAAGVTNAMDVMDVMDAVDERGVVERAAGEHHLARAAESEAVNIVQNDHVSVGARVGSAQEQQQRADNSSDEEDSRDAAVGSENDDAGEPTVAHVAGFAAGGSASIVFASGEQDFQPERASKKRKAEADAETDGDDQQEGQICPICFEPWTNSGAHRIAALKCGHLFGKGCIEKWLKKSAAAKCPHCNARAKLGDVRVIYAKLIAVTDTSDRDRLAEQLEAERAEKLNRANSSAAGAVSPLGGDREHAIHIDDAAASVSPLNAPQQPQLITDAAFIHVQSIATAGISMLDARHMQFVGVHTQAIRDMKCSPHIPEYLLTASMDKTVKMTHISSNSVLHTYKCAHPVWSCAWDAEDSNYLYCGLSNGTVLVYDVRNKDMHVQMLASDVHRQPIASLCHIPPGVSAAPGEGGHAATLLVGSMSGAFAYVKNGGEFVRRDLGLAAGPTGRTFAAICRGDDSSASAAIMDVSQGPVSSLAQHIPSASLAALRTGPPLLDVRAFVYRDHRFLATTSDSVVAVYRRDQPSQ* # ORIGINAL: g2646.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 13048 14490 . + . ID=g2646;Name=g2646.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 13048 14490 . + . ID=g2646.t1;Parent=g2646;Name=g2646.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 13048 14490 . + . ID=g2646.t1.exon1;Parent=g2646.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 13048 14490 . + 0 ID=cds.g2646.t1;Parent=g2646.t1 #PROT g2646.t1 g2646 MKTPIKLIKRFLPKRHKGVPACHEHHWNCNCSVMLDIDNETPCSNDCQRVQERVCSTVIIGKKSVIKRCQHAEDGVNADWLDEVSMILKIKHRNFMQILDFDVHNGEHSQLILPRFGTTIDDFSDYASLSVRKKAFKPVTNQCLSALDYLLENGIIHGDLKPDNVLIDPDTLTINIIDFNSSMNLHPLKTISNSMATYIYQSPEVIWERGVNSASVDVWGIGVVLFYLVTKKAFGMALEHEYAEYTETGQPPKIARDVWDISVTSKTRDILKQSGFDNKHCEMVRKMLAVKPAYRYRANMKFSLEEYIAGVDEISEQDYIPPFLMTPGTDGVSPRLSVFHSMAEVATQVEMSPITFALALNLIDRYISLVFKTGNGLPIDNSVILGGYSAMGLLCLNLAGKLTRDTTISINACTNLLSNAFQTSFIVALERRIVDTLLRNGTMHRVTALDRLEHARADSYTCEQVIKLHCGVTPPRGSGC* # ORIGINAL: g2650.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 26814 27425 . - . ID=g2650;Name=g2650.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 26814 27425 . - . ID=g2650.t1;Parent=g2650;Name=g2650.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 26814 27425 . - . ID=g2650.t1.exon1;Parent=g2650.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 26814 27425 . - 0 ID=cds.g2650.t1;Parent=g2650.t1 #PROT g2650.t1 g2650 MASTKTAKLSMASLQECISETDLVIAEQAKRIETLEAAVAKLTTNDSSKENVAPAEPTRPKRSKSAATYYALSVKDVLREKNPGLTTKELATKIAENWERMSEKKQKPFYVMESDDKLRYKEEKQKLKQSGTYVKKPKRALSAYNFFMKDEFSKVREQNPNMRHTEVVAEIGKIWKSLSDGDKKPYNRLAEADKLQRNDAVTA* # ORIGINAL: g2641.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 2576 3634 . - . ID=g2641;Name=g2641.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 2576 3634 . - . ID=g2641.t1;Parent=g2641;Name=g2641.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 2576 3634 . - . ID=g2641.t1.exon1;Parent=g2641.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 2576 3634 . - 0 ID=cds.g2641.t1;Parent=g2641.t1 #PROT g2641.t1 g2641 MSAIFAVFHTLMSAGDNFLAVSHGYGGTLSSFNSSYKRFGWEVRYIGDADDVCVDKRTKLIFSESLINPGTSVADIALLSALARRHNIPLVIDNTLATPVLCRPIEHGANIVIHSASKYLGGHGEYMGGVVVDGGNFEHWGCVALGGQSDAYGGDLSDKFTPSNLKFSAALQLCTLRNIGMTLAPQSALGILTGIETLFLRMDRSCASALKIAEYLVWRKNNCGDVEFVEYLGLPDNPNGALTNKYLGGKGGALVNFGIRGGLEETKQFVDGLSLIYLATSFGETYSLIIHPASTIPAKTDSEVVAAGVRPNHLRLSVGLEHPDDIIADLSSAFQARTARHGPPRHHGSDVY* # ORIGINAL: g2645.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 12450 12980 . - . ID=g2645;Name=g2645.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 12450 12980 . - . ID=g2645.t1;Parent=g2645;Name=g2645.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 12450 12980 . - . ID=g2645.t1.exon1;Parent=g2645.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 12450 12980 . - 0 ID=cds.g2645.t1;Parent=g2645.t1 #PROT g2645.t1 g2645 MGSQFDAFVDSLYEIGKQTSAFDTKESFMAHAQHAFGKFAIDRSTQYCSLMFQKTMPPIERDFVHYLRTNPPAQPTTDQATTPPTTQSTTPPTTQPAAQHVVNQTFSSQEELLLRLLDSNKRPENTESPESDVMTTEPARHINPKNIRMSKLPERKQMSSAMPRGAVFADRRPSIC* # ORIGINAL: g2648.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 20161 21729 . + . ID=g2648;Name=g2648.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 20161 21729 . + . ID=g2648.t1;Parent=g2648;Name=g2648.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 20161 21729 . + . ID=g2648.t1.exon1;Parent=g2648.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 20161 21729 . + 0 ID=cds.g2648.t1;Parent=g2648.t1 #PROT g2648.t1 g2648 MLNRVYRAKETTVRRTFSHRIPVFGEDGGDLTYEGEKDVTYNFITDGMWDKRVGCMLVGLGGNNGSTFVGTLLANNMQASGVDMSWHTRTGVQKPTFLGSVTQASTVYLGEHDNQPIHVPFSGIVPMCDPHQLVIDGWDISNTDLAAAMARSQVLEPELQAKLAPYMSKIVPRPAVVYPEFIASNQADRANNVITGTSSKWEDVERIRADIRDFKQREQLDKVIVLWTANTERFANIVSGVNTTWEELESALRASSPEISASTVYAVASILEGCPFINGSPQNTFVPAVIDLVESLYERKLKGDATVGHVFIAGDDFKTGQTKLKSVLVEYLVSAGIKPTSIVSYNHLGNNDGLNLAEPLQFHSKEISKSNVVDDMVASNRLIYKLGEHPDHVVVIKYVPSVGDSKRAMDEYVSEICMNGKQTFAIHNTCEDSLLATPIMLDLVILAELFTRVRYNTESDDAALVQFHPVLNLLSYWLKAPVVPKGTPVVNALNRQRQALENFLKMLAGVPTDAGFRPRATM* # ORIGINAL: g2651.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 30535 31989 . - . ID=g2651;Name=g2651.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 30535 31989 . - . ID=g2651.t1;Parent=g2651;Name=g2651.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 30535 31989 . - . ID=g2651.t1.exon1;Parent=g2651.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 30535 31989 . - 0 ID=cds.g2651.t1;Parent=g2651.t1 #PROT g2651.t1 g2651 MSVKRFIQKRVFWNTTSAHHEPAHAPTPINWQCGCSRTLDVDDVEPCGRECERVQLRVCAAVIIGQKKVIKMYEHADDGINADWIDEVSSILRINHPNFIRLLDFDVYNVSYSKLVMQRFGITIDAFANDSPAIVRKQAFKPVCKQCVGVLDFLLMNGIIHGDLKPDNVLIDPVTFFIKIIDFNSSMSLYPLKTISSVMGTFIYQSPEVIWERKVNSPSVDVWGIGVVLFYLIVQKPFGYALNDEYREYFKTAQPPVAMTRDQWNGRVSRKTTEILCDAKFKQFNWRQREKVMHMLAVNPLERYRSDLKFSFDGYVAAIDEADGKHNNIPVVMKPHPDFENTEPRLLVFELMAETAEHLGMCTITLALGLSLLDRYVSLVFTAQGKTEKDASAGILGSFPAIGMLCLNIAGKITRDVTMNMNACGKLLVQKFTVKFLKELERDIVTTLLKKGSLHRVTILDRLGDIDFNSMTHYDVLAHYIRSH* # ORIGINAL: g2642.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 5862 7987 . - . ID=g2642;Name=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 5862 7987 . - . ID=g2642.t1;Parent=g2642;Name=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 7924 7987 . - . ID=g2642.t1.exon1;Parent=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 7924 7987 . - 0 ID=cds.g2642.t1;Parent=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 7382 7685 . - . ID=g2642.t1.exon2;Parent=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 7382 7685 . - 2 ID=cds.g2642.t1;Parent=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 5862 7212 . - . ID=g2642.t1.exon3;Parent=g2642.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 5862 7212 . - 1 ID=cds.g2642.t1;Parent=g2642.t1 #PROT g2642.t1 g2642 MVPLCVQKEIETMIANAKKTDACVPLLRKFKIVKCYYSTNTGEIYMEYVDDMIDAQVSGGYRHAFRVNRTMAIKSAFRKKPKPYNPYKPGHQVKQVVKNVHFADRPVYRQVSPSPPLSPGQRSIAQDIDDPDVDDLKGMFENSNVYMWTSTASLSQTFMLDPTTIILPSTVQESAKPSQLPNLTESQNDDMATSQSKIQQQSSQQSSQQSSQQSSQQSSQQSSQQSSQQSPQQSPQSSLLSSLLLSLLSSPQSSPQSSPRPTEKQSAYPISSTSWATSTLSLSRDQLLTQQTSSKHSSSWPTPTIIFLFSLLRDVTWTLGLIPTVYVLPNERDVFPSASGQIEVSVVCATVLDYVVTGSKVVFSSVSNDDIADNSVVSCTYNIKSGGQSGNTTFHITFVPMSSDGVAKTGSVQVRFDAKLEDFTKEKRVSFVQGIALYLGLLPENVAIVSLREGSVIVEMAFIGLAPDQNFGSFASALEQGAASGSLANAVGYPVLGITSTPPTQPTIQPTTQPTTQPPTSNNIVKITVPAVIGGAAFVGVGIFAAIRRRKFRRTYAVSDPPLSIESARPLP* # ORIGINAL: g2649.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 24631 25044 . + . ID=g2649;Name=g2649.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 24631 25044 . + . ID=g2649.t1;Parent=g2649;Name=g2649.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 24631 25044 . + . ID=g2649.t1.exon1;Parent=g2649.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 24631 25044 . + 0 ID=cds.g2649.t1;Parent=g2649.t1 #PROT g2649.t1 g2649 MAAKMLSPQGKVVDGAVNNPRLRGGKSHTVSHDHFVATRDLLAQHIAMAESVSQMKRIIDEHAAQPSSVLNGFNAFEVVWMIVETVFAVFVSYGLVDESSRVFSTISLCLLVVHYGYRVFALWWTFLHRPKRIVRSD* # ORIGINAL: g2644.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 9936 11612 . - . ID=g2644;Name=g2644.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 9936 11612 . - . ID=g2644.t1;Parent=g2644;Name=g2644.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 9936 11612 . - . ID=g2644.t1.exon1;Parent=g2644.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 9936 11612 . - 0 ID=cds.g2644.t1;Parent=g2644.t1 #PROT g2644.t1 g2644 MDQPTGEMCLKLRVERTFNGYRVSDLKSAIQKYARRGELDNGLYCLAELDLFSLAENDSSIAANLARKSNMTVEQVVSNATKIRSNIINRLVVMISEEVSVACWWLPIVAKRLYEAWWTNRKNDTSRQYLTDFYCTVVAQRKIRLVSDFKTAYLLPPKPDCDGALHIRLLLECDPQLYALQYSGENAADENAILRKIGKLLSERNHAALYWIGQIVQCHPKQIANVWAIVHAQVRNSEATNALQFFYKKMTHKEKPIYLYHAALLIIFDAQIDWTGTGTDRRATTVRSLTARTAAPPRNCLLQAQTALTTTLPNYDNNLAGYKLKLDDYIFDIHTGKLSTGGLVEFATNGSLVTNEATEFLIPAYRQLYIDFKRLQENPKAVLTPAVTVKPPKTINEPKTTINEPKTINEPKTNNEPDGIVARGRNPAIFTLPHAQKLTARHKKVVYVDAAAGVVYKGPYNATGTAYRNNIVRIQQVKELCRQLGVPSTVRDWRQPVQMQDGSLFLVADFVGDPTKIQTDIVSSKIETDVPVIRRHGPPRHHGSDFFCRFLSLLQTTH* # ORIGINAL: g2643.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 9323 9883 . + . ID=g2643;Name=g2643.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 9323 9883 . + . ID=g2643.t1;Parent=g2643;Name=g2643.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 9323 9883 . + . ID=g2643.t1.exon1;Parent=g2643.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 9323 9883 . + 0 ID=cds.g2643.t1;Parent=g2643.t1 #PROT g2643.t1 g2643 MVEITVQDIIEGDIRQRLQDVFTSLDNNNKGSLKVSDIVDVKSAVTKESESKVLKMLGSTKFLGLYQYSNVTKEEFEEKFYPTLLQKIVTKLYASILDDCTVEFMNELKESAQKILTECASEPVVNKATAPFSRTIATTVQVEPDAPVEGAAPVVNIRTKKLTLTPRANRNVAKSNVQTIGFGMGL* # ORIGINAL: g2647.t1 original gene structure, not modified by PASA NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS gene 17668 18921 . + . ID=g2647;Name=g2647.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS mRNA 17668 18921 . + . ID=g2647.t1;Parent=g2647;Name=g2647.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS exon 17668 18921 . + . ID=g2647.t1.exon1;Parent=g2647.t1 NODE_171_length_33530_cov_23.0333_potentialcontaminant AUGUSTUS CDS 17668 18921 . + 0 ID=cds.g2647.t1;Parent=g2647.t1 #PROT g2647.t1 g2647 MGADEAANVVMRYENYLIGATHWCMVRPTVRGSIVWPASLSTSLLTAVGHVIQHLDGSAFRADGIDPAVVKHAVGELQRQMKKQAWLQVAAAPFTLLIALMDYSFRHVPELRGTGSADIFGSDFTQYGRWKLREFNELNHNFENRLLRAKESASVMTSRQTGRLFVVLASSAAYILGSVLVTLMVMSVFENGLLQQDDFLFGRNIIWYIGVIGLIVGGIKACLPTNDGTQTSKWEAKFAQEVHDLSAKDNLGALYQSKVRLFLVELFGVLYTPWFVLTQLVKEPLATSICEFCVYHTTQHERLGPLNKLGLFKNVLEEQAMNCVDIKLERSMVNFGDNHPEWKRKSALHMNKPLSDIMAGAGGRGGADGGGDGRSGNSSSSETLFESQVDHHLIELIELQMPTGEYETEQINTNEAQ* # PASA_UPDATE: g4072.t1, single gene model update, valid-1, status:[pasa:asmbl_7657,status:12], valid-1 NODE_4832_length_1217_cov_38.4606 . gene 130 1118 . + . ID=g4072;Name=g4072.t1 NODE_4832_length_1217_cov_38.4606 . mRNA 130 1118 . + . ID=g4072.t1;Parent=g4072;Name=g4072.t1 NODE_4832_length_1217_cov_38.4606 . exon 130 416 . + . ID=g4072.t1.exon1;Parent=g4072.t1 NODE_4832_length_1217_cov_38.4606 . CDS 130 416 . + 0 ID=cds.g4072.t1;Parent=g4072.t1;5_prime_partial=true NODE_4832_length_1217_cov_38.4606 . exon 622 772 . + . ID=g4072.t1.exon2;Parent=g4072.t1 NODE_4832_length_1217_cov_38.4606 . CDS 622 772 . + 1 ID=cds.g4072.t1;Parent=g4072.t1 NODE_4832_length_1217_cov_38.4606 . exon 912 1118 . + . ID=g4072.t1.exon3;Parent=g4072.t1 NODE_4832_length_1217_cov_38.4606 . CDS 912 1118 . + 0 ID=cds.g4072.t1;Parent=g4072.t1;3_prime_partial=true #PROT g4072.t1 g4072 VLRPFLLRRLKSDVETRLLPKIETKVYVGLSKMQRDMYQKILLKDIDIVNGAGKAEKVRLLNILMQLRKCCNHPYLFDGMEPGPPYTTDLHILENCGKMIVLDKLLTKLKEQGSRVLVFSQMTRMLDILEDFCIWRGYPHCRLDGQTPHEERARMIDEYNAPDSEKFVFLLSTRAGGLGINLATADTVILFDSDWNPQVDLQAEDRAHRIGQKKQ # PASA_UPDATE: g4931.t1, single gene model update, valid-1, status:[pasa:asmbl_4894,status:12], valid-1 NODE_2722_length_5336_cov_38.0405 . gene 56 1134 . + . ID=g4931;Name=g4931.t1 NODE_2722_length_5336_cov_38.0405 . mRNA 56 1134 . + . ID=g4931.t1;Parent=g4931;Name=g4931.t1 NODE_2722_length_5336_cov_38.0405 . five_prime_UTR 56 56 . + . ID=g4931.t1.utr5p1;Parent=g4931.t1 NODE_2722_length_5336_cov_38.0405 . exon 56 200 . + . ID=g4931.t1.exon1;Parent=g4931.t1 NODE_2722_length_5336_cov_38.0405 . CDS 57 200 . + 0 ID=cds.g4931.t1;Parent=g4931.t1;5_prime_partial=true NODE_2722_length_5336_cov_38.0405 . exon 436 1134 . + . ID=g4931.t1.exon2;Parent=g4931.t1 NODE_2722_length_5336_cov_38.0405 . CDS 436 591 . + 0 ID=cds.g4931.t1;Parent=g4931.t1 NODE_2722_length_5336_cov_38.0405 . three_prime_UTR 592 1134 . + . ID=g4931.t1.utr3p1;Parent=g4931.t1 #PROT g4931.t1 g4931 FLTKNPLKRLGSNLDTGKNDIRNHPFFKPIDWGKLESRQIKPAFKPKIKAKRDANNFDSDFTNEPPQLTPTEASVLANIVQEEFLGFSYVNPSIVGTSG* # ORIGINAL: g4932.t1 original gene structure, not modified by PASA NODE_2722_length_5336_cov_38.0405 AUGUSTUS gene 1867 5042 . - . ID=g4932;Name=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS mRNA 1867 5042 . - . ID=g4932.t1;Parent=g4932;Name=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 4829 5042 . - . ID=g4932.t1.exon1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 4829 5042 . - 0 ID=cds.g4932.t1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 4189 4562 . - . ID=g4932.t1.exon2;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 4189 4562 . - 2 ID=cds.g4932.t1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 3912 4058 . - . ID=g4932.t1.exon3;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 3912 4058 . - 0 ID=cds.g4932.t1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 3522 3785 . - . ID=g4932.t1.exon4;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 3522 3785 . - 0 ID=cds.g4932.t1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 2602 3330 . - . ID=g4932.t1.exon5;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 2602 3330 . - 0 ID=cds.g4932.t1;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS exon 1867 2289 . - . ID=g4932.t1.exon6;Parent=g4932.t1 NODE_2722_length_5336_cov_38.0405 AUGUSTUS CDS 1867 2289 . - 0 ID=cds.g4932.t1;Parent=g4932.t1 #PROT g4932.t1 g4932 MISAAQRTSSTTTTTTSTTTTTTELNTLDNSSRKDVCDRPTHRIPKFIIMSATLEEGKFAEFFDSPVFKIPGRVYPVKMIYTEADVVETLRRPGSSTSARDSLPSIPADYIERGVHTVLDIHTTRPPGDILVFLTGSAEIEKACDKLFALGERLKYKEDVSHYPDVRALFVLPLYGSMQSLHQQRVFEPSPPGVRKVVVCTNIAATSVTVDGVKYVVDCGLVKQKMHDSRTGLESLDIVPISKSEADQRAGRAGRTSPGECYRVYNPNTFELFAHATTPEIQRSGLASVVLALKAAGVSDVLRFPYVDRPDARMLKEALVTLRQLGALAEDGRITQTGHEMAELPLSPQLARSVVAAIDMGCVDYVLTCAAMLSVEGVFFKPHQGTDKSASMDILAVAEQKKEELLARAGAVHDIALLVEAYREWSLVTEAFGAGRKRRRDDDVADGDRLDESGRSRAPSHAAHSSLSPEAWCQDHFIHARSLRTASGIRGQLNDIVEQLLRRRQSNRVGESVRRNVRDNISSASASGSAGERDAIARQALCEGFFPQTARRWAGKHVFRTMDGKASGVYLHPGSVLSTTEADLGWVIYHEAMSASSKVYMHNVCPIEYAWVSSLLPRLRGIDIDKLCGGSAVEVDSSVGAGGDGDGKGAGAQSEENVLPEGGDDCAIDDTFGTAVVDEGVRNREAGVAAAKERYLQRKLQKHAAVPVKSKSKSVR* # PASA_UPDATE: g6310.t1, single gene model update, valid-1, status:[pasa:asmbl_8977,status:12], valid-1 NODE_706_length_18819_cov_42.9582 . gene 128 1591 . - . ID=g6310;Name=g6310.t1 NODE_706_length_18819_cov_42.9582 . mRNA 128 1591 . - . ID=g6310.t1;Parent=g6310;Name=g6310.t1 NODE_706_length_18819_cov_42.9582 . five_prime_UTR 1487 1591 . - . ID=g6310.t1.utr5p1;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . five_prime_UTR 1273 1305 . - . ID=g6310.t1.utr5p2;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . exon 1487 1591 . - . ID=g6310.t1.exon1;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . exon 844 1305 . - . ID=g6310.t1.exon2;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . CDS 844 1272 . - 0 ID=cds.g6310.t1;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . exon 543 678 . - . ID=g6310.t1.exon3;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . CDS 543 678 . - 0 ID=cds.g6310.t1;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . exon 128 240 . - . ID=g6310.t1.exon4;Parent=g6310.t1 NODE_706_length_18819_cov_42.9582 . CDS 128 240 . - 2 ID=cds.g6310.t1;Parent=g6310.t1;3_prime_partial=true #PROT g6310.t1 g6310 MGHDEHVKAPLGPVVNTEAFVRSEIEQFKAEVGQVEKWFKTERFATIVRPYSAEAVVRLRGTVKQDYLANQQAKKLHAMLSEHKRNGTTAHTFGSLDPVQVVQMAKYLSTVYVSGWQCSSTASSSNEPGPDLADYPMDTVPNKVDHLFKAQLFHDRKQREARSHLSFDERLRTPYVDHLRPIIADADTGHGGLTAVMKLTKMFIENGAAGVHVEDQAAGTKKCGHM # ORIGINAL: g6313.t1 original gene structure, not modified by PASA NODE_706_length_18819_cov_42.9582 AUGUSTUS gene 9307 9996 . - . ID=g6313;Name=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS mRNA 9307 9996 . - . ID=g6313.t1;Parent=g6313;Name=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 9884 9996 . - . ID=g6313.t1.exon1;Parent=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 9884 9996 . - 0 ID=cds.g6313.t1;Parent=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 9571 9659 . - . ID=g6313.t1.exon2;Parent=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 9571 9659 . - 1 ID=cds.g6313.t1;Parent=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 9307 9452 . - . ID=g6313.t1.exon3;Parent=g6313.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 9307 9452 . - 2 ID=cds.g6313.t1;Parent=g6313.t1 #PROT g6313.t1 g6313 MGIGERVKYGLPRENGSQDMFKPSVVAPRPVKPITHPIPVAREPQHAARNEILEILQSCESKHAMLLGSSPPARAANPVAQNSPFCGDSSSFIGVELGLLTPSPPPPLHKRGVAT* # ORIGINAL: g6311.t1 original gene structure, not modified by PASA NODE_706_length_18819_cov_42.9582 AUGUSTUS gene 2773 6379 . + . ID=g6311;Name=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS mRNA 2773 6379 . + . ID=g6311.t1;Parent=g6311;Name=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 2773 2824 . + . ID=g6311.t1.exon1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 2773 2824 . + 0 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 2972 3124 . + . ID=g6311.t1.exon2;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 2972 3124 . + 2 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 3286 3462 . + . ID=g6311.t1.exon3;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 3286 3462 . + 2 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 3621 3759 . + . ID=g6311.t1.exon4;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 3621 3759 . + 2 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 3902 4072 . + . ID=g6311.t1.exon5;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 3902 4072 . + 1 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 4250 4392 . + . ID=g6311.t1.exon6;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 4250 4392 . + 1 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 4536 4709 . + . ID=g6311.t1.exon7;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 4536 4709 . + 2 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 4907 4968 . + . ID=g6311.t1.exon8;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 4907 4968 . + 2 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 5303 5484 . + . ID=g6311.t1.exon9;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 5303 5484 . + 0 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 5760 5946 . + . ID=g6311.t1.exon10;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 5760 5946 . + 1 ID=cds.g6311.t1;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 6164 6379 . + . ID=g6311.t1.exon11;Parent=g6311.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 6164 6379 . + 0 ID=cds.g6311.t1;Parent=g6311.t1 #PROT g6311.t1 g6311 MEGTTGNDFINTALHAEGIQVLGGVDERFSQILTLHALRFLAKLHRLYDDRRIELLKTRELRQREIDAGKLPGFLESTAHIRAGAWKAAPLAPGLVDRRVEITGPVDRKMIINALNSGATQFMADFEDSSAPTWENMVSGQCNLRDAVHRTISFSTPDGKSYTLKDNVATLLVRPRGLHLDESHVVVDGRPLSGSLFDFGLFFYHNARRTLDIGQGPYFYLPKMESHLEARWWNDVFVTAQSELHISRGTIRATVLIETIMAAFEMDEILYELKEHSSGLNCGRWDYIFSTIKRLRNHRQFIMPDRKDVTMTTHFMDSYVRLLIKTCHKRGVHAMGGMAAQIPIRNDPAANDIAMEKVRNDKLREVRAGHDGTWVAHPGLIPIAKEIFDKHMPTPNQIHVKRDDVNVTAEDLLSTKYSGSITDDGVRQNISVALLYMEAWLRGQGCVPIHNLMEDAATAEISRSQLWQWIRFGAKTSSGQTVTRDYVTRVINEEIDRVKTQLGDKYASTQYERARVHFAHLVTSEDFPEFLTSVCYDSITSKVAQSTNAKL* # PASA_UPDATE: g6315.t1, single gene model update, valid-1, status:[pasa:asmbl_8981,status:12], valid-1 NODE_706_length_18819_cov_42.9582 . gene 14437 18819 . + . ID=g6315;Name=g6315.t1 NODE_706_length_18819_cov_42.9582 . mRNA 14437 18819 . + . ID=g6315.t1;Parent=g6315;Name=g6315.t1 NODE_706_length_18819_cov_42.9582 . exon 14437 15679 . + . ID=g6315.t1.exon1;Parent=g6315.t1 NODE_706_length_18819_cov_42.9582 . CDS 14437 15679 . + 0 ID=cds.g6315.t1;Parent=g6315.t1 NODE_706_length_18819_cov_42.9582 . exon 16056 18819 . + . ID=g6315.t1.exon2;Parent=g6315.t1 NODE_706_length_18819_cov_42.9582 . CDS 16056 18819 . + 2 ID=cds.g6315.t1;Parent=g6315.t1;3_prime_partial=true #PROT g6315.t1 g6315 MGSAAAQGSVLSFSLLWFRASLFALLMLSAVIAPVSAIEREVCNLDMLEESCPEFLDGIWSGQHLSPIINPSYTADFTGTFSSSDLTFVIEYDNSDTFVYDILCSYNNSRFVIDFLVNDTVEYRGIVRTLYASTSMSVFLLPGDLCARAEYSTLSALRESYYIEWDMWTNSTPYLGCYPEDTVSVSTIVAGASMPHTHPVVCAAKCAAAGYDFSGVVDGITCTCTNDQPDGSRVADSLCGLATCDSSIVDVYLGVTCGGAGYYSVFETSNAFADLNVTMSSTLSIGDEFTISVSAMPFAFDTVMIYYGDDNYDVITGADSIQIIQGSNRYSKVGWFKVTVIAAAPNAIALADRTKLALYEGQVSVYAHPHAPSISPIEPIYLGDPGSLSFGIRSGTGMFAQIIFEDNAVDAYVLDAPAVVIGYGPLDSTLAADTLTTYVDTAPITQSGVLSKWIFRTNGAGPVYFQVWRVQCQGGKILCTRWNGPNSFPKCVDDVSDCIASPGCGGSTTYCAAGKTCALSDTCEASCPDASETFCERTATCESNITPCGTWDGSVDVVLVGQTYLNNVGSYNEIVTLDTSIDVQAGDFIGFTQNQDGVVRGFEGSYPLKATYFQAFGDISTAIDPGVSTMTLSSADVTSNGYAFSAIVESPREGTVQFTPTVTGKGMDATLRVWNELSYEESTVLYDVYKYIGELSDAVLDFGSAGDYVFFSSIMSDGAGANFSVTVTWEDSEIDTISLDSCPDVLCDVGACATGSYRGVCFVNITECYYGSDQVALACSDGDVIMSARKFVADAGDYVVSFIVTDLTDTTITDFVTSTITVPDGGTTVDVTFGPHDSYVRAASQVSLPIVLVSSSPVTAYWTFVHEGGSQFDYEVDNVDQGTPDFTFTAPSSGYWAVTIIVDTGSVMATANTSFTSVETLGVPTALPVVVMTGETAQLEVSVTGSHITYMWKFDDGSFAVSDYYMDTVFNSPGSVDVNVTMANPLDDFAFVTFVVYVYDPLPSEYGTVFTQRPYSLTVVMDYNFAHGTGVYFEILWGDGSGLTTVYVSDGVLSGTVQKTYASAGTYQIAYRIASPVNASDPLHTFDFPVEEPIVGLSSLEDGTAYCATGESVTINVDVAEGSDFTFVWYWGDGTSDTTQSPSASHYYNAPGEVLLNLTVYNDISSAWVPISVIVEDSVQNLVSLDANPFVVALNEATDFLVSISSGTSVSFSWIWGDGLADSLTFSPTASHTFVFAGSHSVNVTAFNNVSSAWLIIPVMAVYSVSGLSASYPDPLLIAFGTPFDFTVDLSAGTDVSYLWDWGDQTSTSNSDRNATHTYASLGTYFLNVTAYNDV # ORIGINAL: g6314.t1 original gene structure, not modified by PASA NODE_706_length_18819_cov_42.9582 AUGUSTUS gene 11405 12271 . - . ID=g6314;Name=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS mRNA 11405 12271 . - . ID=g6314.t1;Parent=g6314;Name=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 12184 12271 . - . ID=g6314.t1.exon1;Parent=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 12184 12271 . - 0 ID=cds.g6314.t1;Parent=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 11560 12067 . - . ID=g6314.t1.exon2;Parent=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 11560 12067 . - 2 ID=cds.g6314.t1;Parent=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS exon 11405 11441 . - . ID=g6314.t1.exon3;Parent=g6314.t1 NODE_706_length_18819_cov_42.9582 AUGUSTUS CDS 11405 11441 . - 1 ID=cds.g6314.t1;Parent=g6314.t1 #PROT g6314.t1 g6314 MMTDPMMENATVESLFPTFDNAGDSFVPSGFDLMVNDILGFPMDDGLKTMPTTTGPVSSVPSTTVPFVGIKLEQLPLGGNWMERTANLAGFDAEALMMPSPQTASVPQSPLPDEDGSESLYGDASLSSRGRRSGKRPLDTEDDKLANKRMRNRLAAQKCRMKKAQESHGLEQRAVELKKENADLRDRLGKMQAEVEYLRNLIKLAVRPKD* # PASA_UPDATE: g6312.t1, single gene model update, valid-1, status:[pasa:asmbl_8978,status:3], valid-1 NODE_706_length_18819_cov_42.9582 . gene 7043 8702 . - . ID=g6312;Name=g6312.t1 NODE_706_length_18819_cov_42.9582 . mRNA 7043 8702 . - . ID=g6312.t1;Parent=g6312;Name=g6312.t1 NODE_706_length_18819_cov_42.9582 . five_prime_UTR 8547 8702 . - . ID=g6312.t1.utr5p1;Parent=g6312.t1 NODE_706_length_18819_cov_42.9582 . exon 8128 8702 . - . ID=g6312.t1.exon1;Parent=g6312.t1 NODE_706_length_18819_cov_42.9582 . CDS 8128 8546 . - 0 ID=cds.g6312.t1;Parent=g6312.t1 NODE_706_length_18819_cov_42.9582 . exon 7043 7789 . - . ID=g6312.t1.exon2;Parent=g6312.t1 NODE_706_length_18819_cov_42.9582 . CDS 7387 7789 . - 1 ID=cds.g6312.t1;Parent=g6312.t1 NODE_706_length_18819_cov_42.9582 . three_prime_UTR 7043 7386 . - . ID=g6312.t1.utr3p1;Parent=g6312.t1 #PROT g6312.t1 g6312 MGTETDAKTAENVPVTEAGEVAPLSFDEKYQLSIDICKLPQTELTEIVGIIRECMPTYRLKHGAAGTVDKNTSSTVHAEEIDVNLLDDVTLRRIQQYIRTSLVEFGALRIVIMDSPKQNNIDSYIEQVFKKYNVQDVVRVCDAHYSLAPVAAQGIAVHDWKFKDGEIPSAEIINNWIDLITDRFASAKENAGKNPDAPKHSVAVHCAAGLGRAPVLACIALIEVGNMENDAAVELLRSLRPGAINKTQLEFVLDYKRRGKRSWLSRTVRKIFN* # PASA_UPDATE: g13491.t1, single gene model update, valid-1, status:[pasa:asmbl_5431,status:3], valid-1 NODE_3020_length_4523_cov_50.1996 . gene 1243 3499 . + . ID=g13491;Name=g13491.t1 NODE_3020_length_4523_cov_50.1996 . mRNA 1243 3499 . + . ID=g13491.t1;Parent=g13491;Name=g13491.t1 NODE_3020_length_4523_cov_50.1996 . five_prime_UTR 1243 1425 . + . ID=g13491.t1.utr5p1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . five_prime_UTR 1709 1907 . + . ID=g13491.t1.utr5p2;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . exon 1243 1425 . + . ID=g13491.t1.exon1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . exon 1709 2402 . + . ID=g13491.t1.exon2;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . CDS 1908 2402 . + 0 ID=cds.g13491.t1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . exon 2587 2693 . + . ID=g13491.t1.exon3;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . CDS 2587 2693 . + 0 ID=cds.g13491.t1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . exon 2990 3084 . + . ID=g13491.t1.exon4;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . CDS 2990 3084 . + 1 ID=cds.g13491.t1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . exon 3213 3499 . + . ID=g13491.t1.exon5;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . CDS 3213 3289 . + 2 ID=cds.g13491.t1;Parent=g13491.t1 NODE_3020_length_4523_cov_50.1996 . three_prime_UTR 3290 3499 . + . ID=g13491.t1.utr3p1;Parent=g13491.t1 #PROT g13491.t1 g13491 MEDPFFEVRDDVQKSISTAQELYDRWQELLSDNTTASKNEELDWVARELRTVLKTVELDLDDLDEVIKISESDPEKFDLTRSEIDDRKAFVARTRRTLNDIRDHMANSGNRVKVQQRGELLGGKAGGSGTGSKAAGKKADKYAKAQEETRKQNQTFIDDQKQLQEQIIRQQDHELDQISTSLSRTKEISLKIGDELDAQDELINDLDQHMDNTGSRLKQVIAKVDKVMRSSNDGKQMCCIVVLLIILVVVIVLVVEI* # ORIGINAL: g13490.t1 original gene structure, not modified by PASA NODE_3020_length_4523_cov_50.1996 AUGUSTUS gene 295 850 . - . ID=g13490;Name=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS mRNA 295 850 . - . ID=g13490.t1;Parent=g13490;Name=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS exon 790 850 . - . ID=g13490.t1.exon1;Parent=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS CDS 790 850 . - 0 ID=cds.g13490.t1;Parent=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS exon 585 662 . - . ID=g13490.t1.exon2;Parent=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS CDS 585 662 . - 2 ID=cds.g13490.t1;Parent=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS exon 295 475 . - . ID=g13490.t1.exon3;Parent=g13490.t1 NODE_3020_length_4523_cov_50.1996 AUGUSTUS CDS 295 475 . - 2 ID=cds.g13490.t1;Parent=g13490.t1 #PROT g13490.t1 g13490 MYSDALLVIAISLVTALLSEGISYVLIYRTEKYKKLNAVLERHNKKLERKKESVGDALGVQDKGKKKIDRYEEQVKSVNRELQMVKMKSMMAVAFSFIALMGMWSS # PASA_UPDATE: g543.t1, single gene model update, valid-1, status:[pasa:asmbl_7715,status:12],[pasa:asmbl_7718,status:12], valid-1 NODE_491_length_22635_cov_49.3003 . gene 747 3073 . + . ID=g543;Name=g543.t1 NODE_491_length_22635_cov_49.3003 . mRNA 747 3073 . + . ID=g543.t1;Parent=g543;Name=g543.t1 NODE_491_length_22635_cov_49.3003 . exon 747 949 . + . ID=g543.t1.exon1;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . CDS 747 949 . + 0 ID=cds.g543.t1;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . exon 1119 1804 . + . ID=g543.t1.exon2;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . CDS 1119 1804 . + 1 ID=cds.g543.t1;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . exon 2025 3073 . + . ID=g543.t1.exon3;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . CDS 2025 2878 . + 2 ID=cds.g543.t1;Parent=g543.t1 NODE_491_length_22635_cov_49.3003 . three_prime_UTR 2879 3073 . + . ID=g543.t1.utr3p1;Parent=g543.t1 #PROT g543.t1 g543 MSGLKPPTMSFPAADSAQRVGGKPRAKVALQPGRSLMDWVRLTRSGRNLTGMEGPPRRITLAELRRHRAQGDAWTALRGRVYNMTAYVEYHPGGIDELMRGAGIDCTDLFNEVHKWVNAESMLERCLVGYLVPDDDDDDGADDSSVAIVGKAQSRASSATSSRSESLGASSSSISVALKAEGVFKEPLPIPRPAVSMPSHDFYQTDTTLVVCVYAKNVDKNAVSFSVDERTCVLQFPMPGSKRVFHMRMSLAADVVPAECSVNVLGTKVETRLTKTAPSTWSSMGQVLRLLLNESQASFTKGFHAYTLESRTRHTHDTYIYRLRPKDSAMPDIPAGTHMVFRAHVDGIPVVRHYTPISVSRGIHADFLIKTYATGRLSRHLDALPVGGDIDLSGPMGAVYAGDVSEVDAGVPVIRRALRVGVIAAGTGIAPMVRIIDALPDAATCDIVVANASFKDILLREWLSSAAELRRQKYAAAVGAAKGAVGGESAESQQQQQQQQRNAFTVLHALGRFSVEDVGSDNVEGDLRQCRVDAKIVTERMPPPSPDTLIMVCGTSSFTADMVRILSGSGYAEGMVHAFT* # ORIGINAL: g548.t1 original gene structure, not modified by PASA NODE_491_length_22635_cov_49.3003 AUGUSTUS gene 22032 22611 . + . ID=g548;Name=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS mRNA 22032 22611 . + . ID=g548.t1;Parent=g548;Name=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS exon 22032 22156 . + . ID=g548.t1.exon1;Parent=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS CDS 22032 22156 . + 0 ID=cds.g548.t1;Parent=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS exon 22313 22491 . + . ID=g548.t1.exon2;Parent=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS CDS 22313 22491 . + 1 ID=cds.g548.t1;Parent=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS exon 22592 22611 . + . ID=g548.t1.exon3;Parent=g548.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS CDS 22592 22611 . + 2 ID=cds.g548.t1;Parent=g548.t1 #PROT g548.t1 g548 MADLFATDGESKSRAWGSDDEDESPDEYAEDAVWEWSPSHKLPVNNDGLLECDTLIAAIGSAASQFVRGFLATSRDNAEPIGVLLVPSASFKGNTVHPTAAAHVYAF* # PASA_UPDATE: g547.t1, single gene model update, valid-1, status:[pasa:asmbl_7720,status:3], valid-1 NODE_491_length_22635_cov_49.3003 . gene 17664 21709 . - . ID=g547;Name=g547.t1 NODE_491_length_22635_cov_49.3003 . mRNA 17664 21709 . - . ID=g547.t1;Parent=g547;Name=g547.t1 NODE_491_length_22635_cov_49.3003 . five_prime_UTR 21672 21709 . - . ID=g547.t1.utr5p1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 21411 21709 . - . ID=g547.t1.exon1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 21411 21671 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 21064 21195 . - . ID=g547.t1.exon2;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 21064 21195 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 20653 20812 . - . ID=g547.t1.exon3;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 20653 20812 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 20246 20469 . - . ID=g547.t1.exon4;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 20246 20469 . - 2 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 19746 19940 . - . ID=g547.t1.exon5;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 19746 19940 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 19239 19463 . - . ID=g547.t1.exon6;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 19239 19463 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 18688 18923 . - . ID=g547.t1.exon7;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 18688 18923 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 18153 18276 . - . ID=g547.t1.exon8;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 18153 18276 . - 1 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . exon 17664 17943 . - . ID=g547.t1.exon9;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . CDS 17710 17943 . - 0 ID=cds.g547.t1;Parent=g547.t1 NODE_491_length_22635_cov_49.3003 . three_prime_UTR 17664 17709 . - . ID=g547.t1.utr3p1;Parent=g547.t1 #PROT g547.t1 g547 MKAHVRSSRRAGGGDASGVEAAPPVHASVSADATVRGSSRVPLGRGSTDDWRPSLSVALRLLLGVRIFAAFLSHITDCDETFNYWEPTHYLIHGKGFQTWEYSPAYGLRSYAYLLPHAAVAWIGSLFVSHKIGVFFFVRCALALASSLSEARLYDAVSRTWGAAVGRFALLFMLASAGMFHASVAFLPSSFTMYTTCLACASWLLNEHASAVAWIATGALLGWPFAAAAGIPLAIDCVLRRRRPLAFIAWSIAAFVVLSAYIVTVDHHFYRRMLYAPLNIVLYNVFGGGGPDLYGVEPWTYYFVNGFLNFNVVFVLALVSLPVALLVRAFGSPSFGRLSIAEMSLHLSTLYVWFAIFFTRPHKEERFLFTVYPLVCVGAAVALAGIQSLLVSVAKRARKLRPVAIGSVYGVAAVVVIPFLVLSVSRIWALHVSYSAPISAYTQLYREIETVTRPGVVNVCVGKEWYRFPASFLLPHNAELRFIRSEFRAQLPKPFSKQDGTHRAPSDMNDMNREEPSRYFQFNECDYLVDFDGGPTTELEPRYSGRTEEWETLFTAPFLDVNASTNRWLRAFYVPGMSNRANTYGNYVVLRRRKSH* # ORIGINAL: g545.t1 original gene structure, not modified by PASA NODE_491_length_22635_cov_49.3003 AUGUSTUS gene 8605 12753 . + . ID=g545;Name=g545.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS mRNA 8605 12753 . + . ID=g545.t1;Parent=g545;Name=g545.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS exon 8605 12753 . + . ID=g545.t1.exon1;Parent=g545.t1 NODE_491_length_22635_cov_49.3003 AUGUSTUS CDS 8605 12753 . + 0 ID=cds.g545.t1;Parent=g545.t1 #PROT g545.t1 g545 MDDHDFVPFVDSDFMLWASNAVAALFRPPNVSEGNKDARLVDWILASMASAGLTTTPGHIAIACTPHIDPLFDATEGFLNKRREMRGDPQATVERRFMFHSPRNGISDVVHMVANNYDISKSAMGNFGTGIYLTPSARKALSYSIVSHGYVNMDQTMKEMATAKTKRRNDTRGPESDVLTEELSAAETASPYMDTVVGLVEDKFISARWLRNLNGHHTKIILVFETLSGRPFKTPMNQTMRWITAPPPGYDYVEGTVFDNAQPECVFYSADHVRPVAMVMYRETPGVPYCLSPSVTTRFGVSQFVCKHNLYVTNGAIPLARRVLPHSIDADVDKLLLHEIDECYTFKSPFKFKQQKALVDVAQIHPMLTNYVFSHAPLTDTATASPLAPLSVRPVPLLGELLAMSAVQGDSRVVMSLSTFHALSVGGHVGSHWGGTRRSRLCIAASEVALDAMAKLPLHVFVAFAKLPSSMLIDQLASLANPRNTMPHIVDKLFGRLAIHLSDYDYHTVVMGLHCAQGRALYVAQGIASCITCLPYEVDSDGKALLDLHVAECARIAAENPLACVKTLGSATAVLVNMVLMAAVRKTHVHMFRASIHSRVDVLRRYGVDEPTLKKIGSFYARPDETKPFEYKRLASPTGWKLMYVLNAETMLLHGGYIPIGTPSQVAARPVIDMSDPDSGAETVLHAESLCAVMLACIGDRLVECDVERSGPYMRQLVMIEPLRKTILETAYRVDVVHELAGITDVQTSMYAGEADMLSEITARTHRDHDVTQPQTPLAICMDILNAEPMASLPWYDRTYPKHSCVAVCVTNGAQFTSRIIEFYGTPTELLTSVTVPEPAIAIHAIRALADRAPRSRTSDFVVPESVLLEFTNQLQSMSGKDAIECVYHWNEQVAAHGIRTECKLTPVELLQYATTQTRMDSCMYADDAERQAVTQYRSYLDDVARYRYTMTAILAMEFLGVGISDVLHLVKDGYISLKSYSSRVLKMQEVMSAKRRKMEVGSIDGACANVTANDTNDINDTTDNGESMERTDCASLQPFTRDAISASSPERNEAYVDGPTRKRTISDVLDDSSADASARSVDLITDSNIIRNYMPVSSSDGSSPPSKAAGAKRGRVRRVRPAHTAGELIATNYGYIADARDSASIAAAIVGATTKQAWVNVDESEMASIGCDADCTVCLNPLFPSPMEIDVAEGCNTNAAAIAVDVSKTVVRMRRCPKCVFHESCINYWVAQCNGTVKCPRCQAFYSRGAGPQPHGIMVVERSTNPHFRLEGHWDDPFFLLSFNFSHLSDVNQTLRHAFIPDTPDGRGRRAVALLIKAFDERELFRIGFSVSRNMDNCVIMNGIHLKTAPNGGDANYGWPSPSYFDRLEDELRLKGITLDD* # PASA_UPDATE: g546.t1, single gene model update, valid-1, status:[pasa:asmbl_7716,status:3], valid-1 NODE_491_length_22635_cov_49.3003 . gene 13931 16640 . + . ID=g546;Name=g546.t1 NODE_491_length_22635_cov_49.3003 . mRNA 13931 16640 . + . ID=g546.t1;Parent=g546;Name=g546.t1 NODE_491_length_22635_cov_49.3003 . five_prime_UTR 13931 14256 . + . ID=g546.t1.utr5p1;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . exon 13931 14472 . + . ID=g546.t1.exon1;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . CDS 14257 14472 . + 0 ID=cds.g546.t1;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . exon 14804 16034 . + . ID=g546.t1.exon2;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . CDS 14804 16034 . + 0 ID=cds.g546.t1;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . exon 16246 16640 . + . ID=g546.t1.exon3;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . CDS 16246 16457 . + 2 ID=cds.g546.t1;Parent=g546.t1 NODE_491_length_22635_cov_49.3003 . three_prime_UTR 16458 16640 . + . ID=g546.t1.utr3p1;Parent=g546.t1 #PROT g546.t1 g546 MAAQQPLQSGIMAGIPPRPETRNQMRRVFVEIMRRRNIAVPPANQHISKDDFYALTASKFEETIFARNSNDEVEYASAFKAIMLRHMTPQGPQQQQQQQQQQQQQQQQQLQLQQLQQQQQKLAAAQQALAAAAASPIQAPAPQAVPVAVPVAVQPPQRAVPVPAASPAAQAQSPPNNNNVSNANKGANAVPAQRKRPVKKDPAELQAPPGQPAAAASAAVRAPQQKAAAQARGGANPPTPSGATPAGHVVPSPAGPGASPAAAAAAQAKEAAAKIPSHQQMSKEDAFWERLALMRDIYSETLKETIEIGERDIVSKKAAGANTVGIETNVKRMCDVQRLLHSVRGQATNLRVIKFLDMANLAVTDKSLANLIPQAVTRYVQRCGLANGAFVSSSVASVYNTCFGAPSWAAGNADRLGVKGKRKRTDADSEFDSDDCSEEGPSRKKRMPIVARHELDNVCAYGWRVRSIDPEYDGACAVWITRENEDTSITAAVRIPSDYPNSSAVLDFGRHSLVSGAKSIVEKLNASLANCPTPHSITRLLIAAAGVAQVKS* # PASA_UPDATE: g544.t1, single gene model update, valid-1, status:[pasa:asmbl_7719,status:12], valid-1 NODE_491_length_22635_cov_49.3003 . gene 3189 7670 . - . ID=g544;Name=g544.t1 NODE_491_length_22635_cov_49.3003 . mRNA 3189 7670 . - . ID=g544.t1;Parent=g544;Name=g544.t1 NODE_491_length_22635_cov_49.3003 . five_prime_UTR 7555 7670 . - . ID=g544.t1.utr5p1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 7507 7670 . - . ID=g544.t1.exon1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 7507 7554 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 7352 7390 . - . ID=g544.t1.exon2;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 7352 7390 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 7077 7196 . - . ID=g544.t1.exon3;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 7077 7196 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 6867 6931 . - . ID=g544.t1.exon4;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 6867 6931 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 6562 6762 . - . ID=g544.t1.exon5;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 6562 6762 . - 1 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 6226 6382 . - . ID=g544.t1.exon6;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 6226 6382 . - 1 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 5823 5950 . - . ID=g544.t1.exon7;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 5823 5950 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 5316 5431 . - . ID=g544.t1.exon8;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 5316 5431 . - 1 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 5047 5153 . - . ID=g544.t1.exon9;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 5047 5153 . - 2 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 4699 4798 . - . ID=g544.t1.exon10;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 4699 4798 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 4468 4511 . - . ID=g544.t1.exon11;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 4468 4511 . - 2 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 4189 4300 . - . ID=g544.t1.exon12;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 4189 4300 . - 0 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 3733 3840 . - . ID=g544.t1.exon13;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 3733 3840 . - 2 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . exon 3189 3523 . - . ID=g544.t1.exon14;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . CDS 3399 3523 . - 2 ID=cds.g544.t1;Parent=g544.t1 NODE_491_length_22635_cov_49.3003 . three_prime_UTR 3189 3398 . - . ID=g544.t1.utr3p1;Parent=g544.t1 #PROT g544.t1 g544 MLRTGLYACRLAPAARIAVRKECVRSMSQVSGRSTLKESDPVMFDLINKEKDRQVRGLELIASENFTSKAVMEALGSCMTNKYSEGLPGARYYGGNEHIDECERLCQKRALEAFGLSPELWGVNVQPYSGSPANFAVYTGLLNPHDRVMGLDLPSGGHLTHGYMTNKKRISATSIFFESMPYQLDEKTGYIDYDTLERNARLFRPKMLIAGASAYPRLIDYARMRKIADEHEAYLMTDMAHISGLVSAGVIPSPFETSDVVTTTTHKTLRGPRAGLIFFRRGVRKTTKTGEKVMYDIEDRINFAVFPSLQGGPHNNAIAAIAIAMREATTPAYKEYQAQVVRNCKALAKRLMDTGYTLVSGGTDNHLLLLDLRPKNLDGARAEAVLEKVSITVNKNTVAGDKSAIVPGGLRVGTPALTSRGFKEADFDKVADFIHRGILLTAELKKETGAKLKDFKDALAANNSPVIPKIAELRGEVESFARKFEMPGN* # ORIGINAL: g8309.t1 original gene structure, not modified by PASA NODE_1987_length_8190_cov_25.9984 AUGUSTUS gene 7158 7457 . - . ID=g8309;Name=g8309.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS mRNA 7158 7457 . - . ID=g8309.t1;Parent=g8309;Name=g8309.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS exon 7158 7457 . - . ID=g8309.t1.exon1;Parent=g8309.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS CDS 7158 7457 . - 0 ID=cds.g8309.t1;Parent=g8309.t1 #PROT g8309.t1 g8309 MQLSNQQVLVGVCVLVAAYFLFFRTTSSSTVPSFAQAQNAARILATDPSMPDDYVNKNCPNPASPVDGLLCARKLMKDPRLLQAVDTVIKWLKANGNSQ* # ORIGINAL: g8307.t1 original gene structure, not modified by PASA NODE_1987_length_8190_cov_25.9984 AUGUSTUS gene 5201 5971 . - . ID=g8307;Name=g8307.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS mRNA 5201 5971 . - . ID=g8307.t1;Parent=g8307;Name=g8307.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS exon 5201 5971 . - . ID=g8307.t1.exon1;Parent=g8307.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS CDS 5201 5971 . - 0 ID=cds.g8307.t1;Parent=g8307.t1 #PROT g8307.t1 g8307 MPARVGICCVGAIALIVFLSATSSGAIRDSSDHTSPPAAEPPSEIFTDVPFELRTCKELEDVRREFKTLEPFLLNRTDETQTKAYWVNPGMYLNMGGIPFNINLGGSTSDVIRTLFPSASPDGRMHAANVEGRFVRMVVILIDIVTAFFGEDTETASLPLAPRLSAWAARNRVPFAIFRGGLYVIEERVARALVACAPIPKVHAKDILQQMDDITTTILPKPCKVVMRPVYIDDVDNGGRISIDSGDWRAGAEEDA* # ORIGINAL: g8306.t1 original gene structure, not modified by PASA NODE_1987_length_8190_cov_25.9984 AUGUSTUS gene 402 4103 . - . ID=g8306;Name=g8306.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS mRNA 402 4103 . - . ID=g8306.t1;Parent=g8306;Name=g8306.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS exon 3913 4103 . - . ID=g8306.t1.exon1;Parent=g8306.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS CDS 3913 4103 . - 0 ID=cds.g8306.t1;Parent=g8306.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS exon 402 3531 . - . ID=g8306.t1.exon2;Parent=g8306.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS CDS 402 3531 . - 1 ID=cds.g8306.t1;Parent=g8306.t1 #PROT g8306.t1 g8306 MATVLQQRYNWSATADSDSPAPAAEAVLVVDTGTFFSILPFNQYASKAAILDIAKSVAGFSVFSLSATETFAGLSSALAPYEEVSGVDIISSNAMMFNDNADRLKRVLKPFTIRKINNITFGILSFLDSGFCSRSIFACGTASDQLSKMGELNEETITSSVNRLLAGRLRPDLIVATTPTVTLNAIALARLSARAGIDLLLTGGGNYMTQQETVDNTLVPPPVIEVVDPVSRRRILVASAKKNGETMVRLDLTLFDSTVDGAEPQSVVSGFGLSQRNFSVLPSTTHVTLQNCAGNVTRFPACVAPEPVIDAKLKQMESDVLGMQRADIVGRLAYDLEAGVNGGVCRLRECSAGNFLADAMRKAIPECEIALINAGAIRADLLAGAERNVTAYAMLATYPFPDTVSSIRLPVPILREALQNGVSLISTTSNGGGRYLQVSGIRMKYNPDLPSDRRLLSVQKETSSGQYRSMGDFETFRCCLVPYMLEGGDNYTMFSRIAQQERIDYVYSTGLLVRRYFASVPVVNITTTSRIIIDNSSTSFQCSPPCVHGVCGSNFACICDELWTGFDCGTSLDDCALHRRFGNTLLEANGAAEQYPSGVAIIVLFAIFLSIEVCTVPFLTSRFARFLQRSNTRANISISSLRRNIPNIVRSLLLILQIIQLHAIVLSAELSSNYVHAAGSVSGSVGLTTFSSSFFWYFWLIMSVTLLWIIYASIYIIDGGASLRKTAAGRIFLLPADQLLQTWVSAGFIPTLLCGMRAFHCWYLTPSAQSGLATISAFMAVDGVCNVPCWLAEHWAYITVAFLTILIYYPLATISAMLWQDLDRNLDVRYAPESFYVEPVIKVVLVIMRVYFTESPYAFLAVISFVCGVMGAYHWLRRPCYVVWINITFSLAYASASATALLFLIGRITGAHAIWYGAPAIWGVSVAAAGAYLRWIYPLPLFEKATAASAGEPQARDLLMAMKRILAKRLSMAPRILPSDDVMTSVVTGASTDAWEATDDENCKAMPVCAHSSSACSLDCANVHAAARNAINRATVCGDLHQSALAWFDDAVKDSRWPVALYVGAADGKTFVRLFGEAQSHHHQAIGAGISAEPIGALHAQPGKSV* # ORIGINAL: g8308.t1 original gene structure, not modified by PASA NODE_1987_length_8190_cov_25.9984 AUGUSTUS gene 6802 7122 . + . ID=g8308;Name=g8308.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS mRNA 6802 7122 . + . ID=g8308.t1;Parent=g8308;Name=g8308.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS exon 6802 7122 . + . ID=g8308.t1.exon1;Parent=g8308.t1 NODE_1987_length_8190_cov_25.9984 AUGUSTUS CDS 6802 7122 . + 0 ID=cds.g8308.t1;Parent=g8308.t1 #PROT g8308.t1 g8308 MYYNDSMDNQNTQLLAIFAALALAYLVYMQYQASSDAYAGLGCPRRRQSPAAAAASALPDYVPQKGSHPIVAPPAMRRAAAGNSALERLVNQKVVYTMDPSQSIRA* # ORIGINAL: g1291.t1 original gene structure, not modified by PASA NODE_1923_length_8520_cov_43.3996 AUGUSTUS gene 909 1786 . - . ID=g1291;Name=g1291.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS mRNA 909 1786 . - . ID=g1291.t1;Parent=g1291;Name=g1291.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS exon 1728 1786 . - . ID=g1291.t1.exon1;Parent=g1291.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS CDS 1728 1786 . - 0 ID=cds.g1291.t1;Parent=g1291.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS exon 909 1512 . - . ID=g1291.t1.exon2;Parent=g1291.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS CDS 909 1512 . - 1 ID=cds.g1291.t1;Parent=g1291.t1 #PROT g1291.t1 g1291 MPGVVVPQRWTLEDDALFESIFCPKDLDYDSSQDGTQLYTPDTPPPARLHPLIAELAPVVKLCWQAAVAADPATARFMLSRIHTTHGRAGLFGTGFSAVQISRADRNNGAAVPLHSHSAHLQDSLDVVMVTRAKAHGAQLVCPSLNAYGGQSEASVSAAHVGVTFPMKAGSILVFRGRDIAHGLTEGLFASDGVRFSVTCSLLSDFMQRRFTPDALHLYE* # ORIGINAL: g1292.t1 original gene structure, not modified by PASA NODE_1923_length_8520_cov_43.3996 AUGUSTUS gene 3177 7427 . + . ID=g1292;Name=g1292.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS mRNA 3177 7427 . + . ID=g1292.t1;Parent=g1292;Name=g1292.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS exon 3177 4189 . + . ID=g1292.t1.exon1;Parent=g1292.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS CDS 3177 4189 . + 0 ID=cds.g1292.t1;Parent=g1292.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS exon 4532 7427 . + . ID=g1292.t1.exon2;Parent=g1292.t1 NODE_1923_length_8520_cov_43.3996 AUGUSTUS CDS 4532 7427 . + 1 ID=cds.g1292.t1;Parent=g1292.t1 #PROT g1292.t1 g1292 MTCARAINCGVFIVYVIAVLAGASASSIPSDYAEVHVIPHSHCDPGWKATYPQYMDTVNRILSSVVTAVEADGERRFVWSEIAFFRPWYASQPQHVRDQVKKLVASGRFEFVGGGYVQHDEAVASSDSIITSLAEGWSFLAAEFGVEPKIGWQIDPFGHGTFTQELASRLGWKAVVLNRIHHWTKRGMRAEGTLQFNWGSPFNVQDLVLAHVLYEHYNSPPGLDFERDGPATDDNLAQLAENFVYAVREQLGAYPTRVLMVPFGDDFRHVDADMTLSSMERIIRYVNENAETFRVTARMSTASEYFAAVRKEVATNGVAVSLRGNDFLPYASWFDGYWSGFYGSRPNLKTKIREIESSMRSADHALVLLVASGIQPTPRLTKDIALWLTEFAMGCTMHAQPRTECKELSRDAGAVGDMENVVAAVRKSLAIARRTIALLAHHDAVTGTSTSDVVASYESMSEWAADSARAVSSLAMGLVVSAGSPAQLKEAPLKRIELATVASSRRVPVESAVSPFFADLKLPLKEALCESVVLQNDLAWSRAEIVRLPIAVAALSTHVTVLSSDGEVVVSQIMPKVDASGVDITVIGSHLVFRARMPALGVSIYTLCVDSVNTPPNGSRGGAVPAKVSIFTSDTSMSVIGLMPSLYSLAVHTTDAFYRTPFSDRGVGGGGVTVRFDRQGLPASIKEGTRPATNLSFSLVRYRADFVGLRHGAYKMRMDFGIAPAIGFGGGVLVSVVGLPLLLVLLSRVSRIGMPVVRQRMHPTTFNMLAMGNMGAGICTGAWLATYVAHFDTLGAHCVSFAAGCVVGLWPLLLSRWLDITRRLVLILAFVFYATLALPVSKFVLQDYMAGTISGGPVLGIVTVEGPVLSEVVSVLNGGICVVSSMPQDGLPLTLFGGAAADGDKDTNAHLYQTIAVDVRHIASESNSDTALRIDSSVRNHGSFITDRGGLGVGVVRRHTEMLRQLPGNFYPATNLLGITGAAADSGGPAAQHNDAVFLLTRRSIGASSLRSGRLEAVLHRRSRVDDGAGLMEGTNDVQPIDTSFRLVVIPRRDAQAGARALEVSREALAHNFPPSAYRWAPTVPLGRSGWHGALRHAWIAPLHGMPAMPRDVHVQHMSLVADDVPGARSSSPEKVVVRLQRLLSARSVDRPPYLPNPFDANPSGDELLSGLAENSIVPALRARGHTLLNFLGTRDATEDDAAAMSRDARWLTFSASFDRLPTPGDSVEVEVPFTGSTEKGEFAGIAGLVRADQHKSELDVNDGSAGVGAGAFRWLFLAALAALLLFVARRVRSASQKPHLR* # ORIGINAL: g4416.t1 original gene structure, not modified by PASA NODE_3521_length_3277_cov_39.138 AUGUSTUS gene 375 2412 . + . ID=g4416;Name=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS mRNA 375 2412 . + . ID=g4416.t1;Parent=g4416;Name=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS exon 375 504 . + . ID=g4416.t1.exon1;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS CDS 375 504 . + 1 ID=cds.g4416.t1;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS exon 839 1056 . + . ID=g4416.t1.exon2;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS CDS 839 1056 . + 0 ID=cds.g4416.t1;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS exon 1565 2007 . + . ID=g4416.t1.exon3;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS CDS 1565 2007 . + 1 ID=cds.g4416.t1;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS exon 2237 2412 . + . ID=g4416.t1.exon4;Parent=g4416.t1 NODE_3521_length_3277_cov_39.138 AUGUSTUS CDS 2237 2412 . + 2 ID=cds.g4416.t1;Parent=g4416.t1 #PROT g4416.t1 g4416 WAIIVAQAASGVSYILLGMATTVPMLFLSRMPSLLQHCMQASQAAVADLSDRHTRAKLIGRLTLSYGVGMVLGPLIGGLLSEVYGPSFVATVGGVLCLLSIVPTLLFMEDTRKYRVSNTGGLDLHRIISLGRTRPLLDLLTAKLLVGIAFAIFETSLSAYGASAFGMDAAETGFLLSYAGVVSILANTLLVGWSVSRFGDDLSASAVAVSLLAPSFSLLAMCRGFLTAATFLLPLLALGTVLRTCVTSAVTRAARADETGTAIGLEHGVGSLARVVSPAIGGLLFTYGGFPMIAACGAVLCVGALAVIRTAIDREAEKKLA* # PASA_UPDATE: g4241.t1, single gene model update, valid-1, status:[pasa:asmbl_1956,status:12], valid-1 NODE_1556_length_10492_cov_42.7632 . gene 8924 10388 . + . ID=g4241;Name=g4241.t1 NODE_1556_length_10492_cov_42.7632 . mRNA 8924 10388 . + . ID=g4241.t1;Parent=g4241;Name=g4241.t1 NODE_1556_length_10492_cov_42.7632 . five_prime_UTR 8924 8993 . + . ID=g4241.t1.utr5p1;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . exon 8924 9138 . + . ID=g4241.t1.exon1;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . CDS 8994 9138 . + 0 ID=cds.g4241.t1;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . exon 9354 9412 . + . ID=g4241.t1.exon2;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . CDS 9354 9412 . + 2 ID=cds.g4241.t1;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . exon 9668 9949 . + . ID=g4241.t1.exon3;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . CDS 9668 9949 . + 0 ID=cds.g4241.t1;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . exon 10322 10388 . + . ID=g4241.t1.exon4;Parent=g4241.t1 NODE_1556_length_10492_cov_42.7632 . CDS 10322 10388 . + 0 ID=cds.g4241.t1;Parent=g4241.t1;3_prime_partial=true #PROT g4241.t1 g4241 MADPVNIGKSKKRESSPTPHNTPVFSAIPTSAATKKSPAAAIAEEANMDQQKVTELLMRNPHLQQALQNKMAGLIGSSSGYVESLPADVKRRVNALRNLQEEHGKVDLELQKEIAALERKFLEKFAPLYKKRSDIINGKHEPNDAEAERPADEDEDDEDEVAGKARITELGEDGKDAKPEEKAV # ORIGINAL: g4240.t1 original gene structure, not modified by PASA NODE_1556_length_10492_cov_42.7632 AUGUSTUS gene 7224 8289 . - . ID=g4240;Name=g4240.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS mRNA 7224 8289 . - . ID=g4240.t1;Parent=g4240;Name=g4240.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS exon 7760 8289 . - . ID=g4240.t1.exon1;Parent=g4240.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS CDS 7760 8289 . - 0 ID=cds.g4240.t1;Parent=g4240.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS exon 7224 7635 . - . ID=g4240.t1.exon2;Parent=g4240.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS CDS 7224 7635 . - 1 ID=cds.g4240.t1;Parent=g4240.t1 #PROT g4240.t1 g4240 MAEGDDIKTALAALVTDESLGKVFEAIATACAEIAETIRTASVGKTGTTNTFGDEQLKVDVIADKIVYSALEASGVVSAAASEENSTEVPLKSAAGHVVTFDPLDGSSVIGANFSVGSIFGVWPQGSLLGRKCNEQIGAAISVYGPRDTLVLGIPKESSKTGAAVAIEFTHHHNSSKWIVTKARVSISEGKIFAPGNLRATSDNAGYKALVDYWITNKYTLRYTGAMVPDVYHIYASGKGVFCNVPSPAAPLKLRLLYEVAPMSLITECAGGRSSDGKGSVLAVQVVDLDQKSAVCLGSTEEVKRFEAHNVVN* # ORIGINAL: g4239.t1 original gene structure, not modified by PASA NODE_1556_length_10492_cov_42.7632 AUGUSTUS gene 2429 6082 . - . ID=g4239;Name=g4239.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS mRNA 2429 6082 . - . ID=g4239.t1;Parent=g4239;Name=g4239.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS exon 5335 6082 . - . ID=g4239.t1.exon1;Parent=g4239.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS CDS 5335 6082 . - 0 ID=cds.g4239.t1;Parent=g4239.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS exon 2429 5052 . - . ID=g4239.t1.exon2;Parent=g4239.t1 NODE_1556_length_10492_cov_42.7632 AUGUSTUS CDS 2429 5052 . - 2 ID=cds.g4239.t1;Parent=g4239.t1 #PROT g4239.t1 g4239 MASHHHHAADAGDGGGCHTKESASAREKIVAINRYRSLSSVAQQPQQNHASSHGPVKRASFKEAEGQFVGLYDFKNNLGRGHFAVVKMAEHVFTGEKVAVKIIDKTKLNEMERKHLFQEVRCMKIMKHPHIIRLFEVVDTTTKLYIMMELGTGGDLFEHITEMGKLSEPAARDLFRQVLSAIDYCHSLHVVHRDLKPENLLFCEGVVKITDFGFSVSYKPGQKLETMCGSMSYTAPEILLGDAYEGPSVDIWSLGVILYQMVTGKLPFNESNESETLVNIMEARFTIPEHMSESCADLIRKMLIVDADKRATISDLKKHPWTNEGCTEAPNSQRRVLDLARLSKDEHELILSKLAEIDIPRSLVVAALENGAYDHVVATYYLLAQQLLKKREEAEKGSFSQPASAQGLTAAQRKESNSRGQIKRNLSVGQSAAGDRPRTAGEVDSTTSSTTSLVGGGGVGVGGDSKNRTLVPQNKALRRATVSDRSGHERNHTAPEMSVEALAALHRERLAILNSVSDGAIVPGLESIGGRDSTVSDNDSVTSDDDSPHQSRVNADVSSKNNLTHIEGGSGHHIHHSQAHLGHGKHGGHHGHNHHHVSKVLPPKLMTRSWHVDDSNELPGSAGEGGLKAMQARRKKSRQESAPSPLAGHAMEEDGHERHDPPLPPSFQPDASVVFSRSPKPDAIDRALSAAAAAESARQSLSVSHTAMNETKPTAPRLSASGSVKVIIVGQREEAEGMSPQTGHGDEPRPPVTTESDPSRAKVGSPLALSQQQQLLLSETPKATTERPLSGELSRGRPASVSSSAESGSEQNSRPNSGGRWHNRNKVHPVDQGEVEAALQHQQPNLPSPRPKSADKDRDRDRESLAASNFSSSVNSASVNSPSVNSPSANPLGAAATVVRVIPAQQQLLTFGPSIVRASSPALHVFAEEEDEEDEEGDGDSGDAAMFARKDRRSVSVGGARHPGLRSPVPIIESFDEGKQSPPVVTSSVRSTVVPGTPIVTSAPSLRSLSGAPVGSTTATTTTTTTTAATTSDVSTTPTPTPTSANGGAKAADLAALTLSSKSAGASNGTLFGTRDNSAEGYGSMSTMYVGSNGLVLPIDSPATAKKKAKERDGKKKAGCPVS* # ORIGINAL: g11413.t1 original gene structure, not modified by PASA NODE_3643_length_3044_cov_36.8427 AUGUSTUS gene 1072 2951 . - . ID=g11413;Name=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS mRNA 1072 2951 . - . ID=g11413.t1;Parent=g11413;Name=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS exon 2798 2951 . - . ID=g11413.t1.exon1;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS CDS 2798 2951 . - 1 ID=cds.g11413.t1;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS exon 2491 2609 . - . ID=g11413.t1.exon2;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS CDS 2491 2609 . - 0 ID=cds.g11413.t1;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS exon 2264 2336 . - . ID=g11413.t1.exon3;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS CDS 2264 2336 . - 1 ID=cds.g11413.t1;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS exon 1916 1990 . - . ID=g11413.t1.exon4;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS CDS 1916 1990 . - 0 ID=cds.g11413.t1;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS exon 1072 1584 . - . ID=g11413.t1.exon5;Parent=g11413.t1 NODE_3643_length_3044_cov_36.8427 AUGUSTUS CDS 1072 1584 . - 0 ID=cds.g11413.t1;Parent=g11413.t1 #PROT g11413.t1 g11413 AGSRSTGKEVSELDVFISYRRSTGSQLASLLKVLLTLKGYQVFLDVDELNNGRFDEALLRNVEHAPNFLLVLSPGSLDRCLNDEYNEDWVRKEIFHALGCGRNIIPVMDRFEWPKLEDIPLDIAPIYSLNGVEWTHSYQEACLKKLMSFFQTKEHVGRPLKRRPPGASTINIPLASAAPPSPAVGRMNVRPAGNMPSMHPAARTTSQVAIDTPNPFDPPGGPIVSRTGSQIFPTIAWSEDGSVGSVTGVVPMSPTNESGRLQHLVNSRPDSNPPRSNQRPIPAKTPRKDAAVADKKVAGAAPQTRVCIVQ* # ORIGINAL: g2830.t1 original gene structure, not modified by PASA NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS gene 2 751 . + . ID=g2830;Name=g2830.t1 NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS mRNA 2 751 . + . ID=g2830.t1;Parent=g2830;Name=g2830.t1 NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS exon 2 205 . + . ID=g2830.t1.exon1;Parent=g2830.t1 NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS CDS 2 205 . + 0 ID=cds.g2830.t1;Parent=g2830.t1 NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS exon 274 751 . + . ID=g2830.t1.exon2;Parent=g2830.t1 NODE_5689_length_751_cov_133.713_potentialcontaminant AUGUSTUS CDS 274 751 . + 0 ID=cds.g2830.t1;Parent=g2830.t1 #PROT g2830.t1 g2830 GGVGAGSTCETNVGARRVEVRSLDAALGSTSSSASERVGLLTFSSGAIDYRALPGAEGVNVLVAVVASPRPCPQGAYEKISMVFTDIQSSTNLWAEAPEEMGRALEVHHRLIRELIRKHKGYEVKTIGDAFMVAFKHADDAVRMSYELQHVFHRCGEFSPAIDRAYLAFDQQKIMEEQEGNAELPDSLIRLSCNLSPDVYPMLWSGLRVRIGIHTAFGEIKRDEVTQ # PASA_UPDATE: g10482.t1, single gene model update, valid-1, status:[pasa:asmbl_1703,status:12], valid-1 NODE_1473_length_11084_cov_58.3741 . gene 1584 2672 . + . ID=g10482;Name=g10482.t1 NODE_1473_length_11084_cov_58.3741 . mRNA 1584 2672 . + . ID=g10482.t1;Parent=g10482;Name=g10482.t1 NODE_1473_length_11084_cov_58.3741 . five_prime_UTR 1584 1624 . + . ID=g10482.t1.utr5p1;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . exon 1584 1684 . + . ID=g10482.t1.exon1;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . CDS 1625 1684 . + 0 ID=cds.g10482.t1;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . exon 1857 1904 . + . ID=g10482.t1.exon2;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . CDS 1857 1904 . + 0 ID=cds.g10482.t1;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . exon 2064 2672 . + . ID=g10482.t1.exon3;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . CDS 2064 2255 . + 0 ID=cds.g10482.t1;Parent=g10482.t1 NODE_1473_length_11084_cov_58.3741 . three_prime_UTR 2256 2672 . + . ID=g10482.t1.utr3p1;Parent=g10482.t1 #PROT g10482.t1 g10482 MSGASGIARRLLPRLTLYGKKGQCSLCDEAKEAIEKAEFEYDEIDITDAGQQEWFERYKYDIPVLHLDGKMLMKHRVIEDILLHSLQQWAAKQQPRRQQ* # ORIGINAL: g10483.t1 original gene structure, not modified by PASA NODE_1473_length_11084_cov_58.3741 AUGUSTUS gene 3167 5957 . + . ID=g10483;Name=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS mRNA 3167 5957 . + . ID=g10483.t1;Parent=g10483;Name=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 3167 3542 . + . ID=g10483.t1.exon1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 3167 3542 . + 0 ID=cds.g10483.t1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 3867 4038 . + . ID=g10483.t1.exon2;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 3867 4038 . + 2 ID=cds.g10483.t1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 4362 4689 . + . ID=g10483.t1.exon3;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 4362 4689 . + 1 ID=cds.g10483.t1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 4967 5190 . + . ID=g10483.t1.exon4;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 4967 5190 . + 0 ID=cds.g10483.t1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 5425 5563 . + . ID=g10483.t1.exon5;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 5425 5563 . + 1 ID=cds.g10483.t1;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 5877 5957 . + . ID=g10483.t1.exon6;Parent=g10483.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 5877 5957 . + 0 ID=cds.g10483.t1;Parent=g10483.t1 #PROT g10483.t1 g10483 MSASTIISSAVAATTSALSDTVSSMASATPSASFIASSVASATATAAASLVGSATPTPTESSGGSSVADVIINSRLAIFWISGGFALLSTALSFFSIYKHMVNYRKPEVQRRIVRILWMVPIYAVDSWLSLRFESVAIYLNTARNVYESYVLYQFFGLLVSWLNGEPEINRILANKDPISQPWPFNYCFRDSKPAHPTFFLRMKRGILQFVIIKPTLAIISIILMLCNEFDEGHWSVSKGWGYIAIVDNTSISIAFYCLAIFYVSVKDQLAPFKPVPKFMCVKAIIFFSFWQGIVISGLVAVDLIHDVGNYTAENVSTGVQNFLICIEMLFAACAHAYAFPYKEYEGMMNDSKLTMWQTVLDIIQIRDVVDDTSTSFNIRPGLNYGKLRDVKTTEEEEDDASTPHRHAMTDEVNDSDEEMDILHVRRTTKLDPETMDLV* # ORIGINAL: g10484.t1 original gene structure, not modified by PASA NODE_1473_length_11084_cov_58.3741 AUGUSTUS gene 7460 10902 . + . ID=g10484;Name=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS mRNA 7460 10902 . + . ID=g10484.t1;Parent=g10484;Name=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 7460 7481 . + . ID=g10484.t1.exon1;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 7460 7481 . + 0 ID=cds.g10484.t1;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 7775 9834 . + . ID=g10484.t1.exon2;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 7775 9834 . + 2 ID=cds.g10484.t1;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 10038 10487 . + . ID=g10484.t1.exon3;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 10038 10487 . + 0 ID=cds.g10484.t1;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS exon 10762 10902 . + . ID=g10484.t1.exon4;Parent=g10484.t1 NODE_1473_length_11084_cov_58.3741 AUGUSTUS CDS 10762 10902 . + 0 ID=cds.g10484.t1;Parent=g10484.t1 #PROT g10484.t1 g10484 MASEIVKTWSIDQVTGWLASVGLGDHTAAFKAANITGEKLLDLEMSDLKSHSIGANITARTEILLTIKRLATFGPEPAHRRPTTRLNTHSPSGGNNNNFSSNTSATTDIPRTHSSSDPPPPTQRRWSFFGTSSPAAPSAQALPSLEESAGSGSFPSKDSKDVPTRPKRHSKSPSSPNILKGLASIITPGTKEKPPAPSKPLPSTLSAPQQQQQQQLSEATSPHVSESPSHLSTGMPSPASPSLGKKPSTDRAPSSLNPNNASIRPPLLPRKGSVDTLISSAHSISSAAAGSPHRSGAAQTPTRPVPATPSPSTSSPSSADVASPPRIPTKSTSVMAMAAAHDQTTPALPPKPDASGAPAPPLPPKPVGGERSVESPPLPPKHAPAFAAAMRKAASISTDMSSPPPLPPKTLGGAPMSPTMGERFSFDSAMDAQPRPRPAAPLPGGGGGGGLTSSASMPSLSSLLNQSPADAESNSSSIAAMYARPLKPKRSIERKASIPLADDPNSNSYATVVREKSAGAQEGVSQASSTGGAGNMYDTVKNNNNNSGQQQQQQQQQDQQKQQPPGAMYDSIATRRASVDNILSGPSSPTMYATVIKTGRSFESPHAYARPSLSDEDIDARRTMTPPAVPPKSQKPTALVASPGDDVNSELESILEADRAMHEEEGAESKSQAQKRLERALQRSSKALSICMEKIKLDPRLNQLLQNIDPEYQSWSQVRKMSPRTQKARKVLGLPDSGVDLAVVGAQKSDAGGEEPLYEPVRIGGPSTSQLADPSGDDAEELAVKDAEIILKGKVRYEVAAQSHTNMLYAGFLTKQGGSGLRKNWRRRWFVVSRLTLYYYKTPQDSVALGKIPLPGYSIAPTPDKKFGFKVERSGSRTYRFHTETQVCVM* # PASA_UPDATE: g6793.t1, single gene model update, valid-1, status:[pasa:asmbl_1807,status:12], valid-1 NODE_1504_length_10856_cov_39.9136 . gene 111 948 . - . ID=g6793;Name=g6793.t1 NODE_1504_length_10856_cov_39.9136 . mRNA 111 948 . - . ID=g6793.t1;Parent=g6793;Name=g6793.t1 NODE_1504_length_10856_cov_39.9136 . five_prime_UTR 747 948 . - . ID=g6793.t1.utr5p1;Parent=g6793.t1 NODE_1504_length_10856_cov_39.9136 . exon 111 948 . - . ID=g6793.t1.exon1;Parent=g6793.t1 NODE_1504_length_10856_cov_39.9136 . CDS 111 746 . - 0 ID=cds.g6793.t1;Parent=g6793.t1;3_prime_partial=true #PROT g6793.t1 g6793 MSFSNKEGSIEALTSAEAPIGRSPSIPEESDENVASAVNDTGVPHGRENVDADAPARPAELEITRVIYGNDAERNAVFEYADNYIRTTKYTWWNFLPKNLFEQFHRFANIYFLSIVILNWIPQINAFGKEVAMLPLLFVLAVTAIKDAYEDRRRRISDREVNNRLSTVWDRATSSFVPKAWQDIVVGDIVRLSNDEIVPADILLLNTSEAYQ # ORIGINAL: g6794.t1 original gene structure, not modified by PASA NODE_1504_length_10856_cov_39.9136 AUGUSTUS gene 1814 10722 . + . ID=g6794;Name=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS mRNA 1814 10722 . + . ID=g6794.t1;Parent=g6794;Name=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 1814 1860 . + . ID=g6794.t1.exon1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 1814 1860 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 2043 2192 . + . ID=g6794.t1.exon2;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 2043 2192 . + 1 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 2337 2496 . + . ID=g6794.t1.exon3;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 2337 2496 . + 1 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 2647 2745 . + . ID=g6794.t1.exon4;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 2647 2745 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 2951 3077 . + . ID=g6794.t1.exon5;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 2951 3077 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 3274 3401 . + . ID=g6794.t1.exon6;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 3274 3401 . + 2 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 3641 3767 . + . ID=g6794.t1.exon7;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 3641 3767 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 3911 4023 . + . ID=g6794.t1.exon8;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 3911 4023 . + 2 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 4263 4385 . + . ID=g6794.t1.exon9;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 4263 4385 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 4587 4700 . + . ID=g6794.t1.exon10;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 4587 4700 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 5113 5234 . + . ID=g6794.t1.exon11;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 5113 5234 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 5527 5830 . + . ID=g6794.t1.exon12;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 5527 5830 . + 1 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 6114 7616 . + . ID=g6794.t1.exon13;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 6114 7616 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 7960 8133 . + . ID=g6794.t1.exon14;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 7960 8133 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 8433 8519 . + . ID=g6794.t1.exon15;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 8433 8519 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 8699 9154 . + . ID=g6794.t1.exon16;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 8699 9154 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 9494 10625 . + . ID=g6794.t1.exon17;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 9494 10625 . + 0 ID=cds.g6794.t1;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS exon 10709 10722 . + . ID=g6794.t1.exon18;Parent=g6794.t1 NODE_1504_length_10856_cov_39.9136 AUGUSTUS CDS 10709 10722 . + 2 ID=cds.g6794.t1;Parent=g6794.t1 #PROT g6794.t1 g6794 MSEKSVPEAQLRLEWVYGYRGNQCRGNLYYTATKDVVYFVAGVGVVYSPKNLRQRFFFGHDDDIVSLALHPAKRIVATGQVGVQPYICVWDTETMETVSILKGAHQRGVACLVFSGDGKLLASVGQENDHMIAVWDWKKGTAIATTKGHGDTIFDIQFNPTDKSSVVSCGVKHIKFWTLTGNTLTGKKGVFGKLGEIQSIMCAAFAADGSVYTGTFSGSIYKWKAQNIVSVTAKAHTGPIFCIIAVEEGFATGGKDALVRLWDTDFKPLSKVEIAAIEPGAQIRSVCWDKENVLVGTKNSEVFEINVRDKTHKVIVQGHAEGELWGLAQNPKQPLFVTCSDDRTVRLWNWKEKTLVAKATIDSDARSCAVAPDGSHVAVGLRDGSFVVLKGKDLSETIVRVKDRKEVLHEMKYSPDGAFLAVGSNDNFVDIYDVGNKYKKVGTCSGNSSFIVHVDWSDDGRYIQTNSGDYQVLIFRVPAGKRVTARDEVAGIRWHTWTCVLGEPVTGIWPKYAQKNDVNGLEACEGVVVTGDDFGTVKLFRYPCSKPGAHARVYPGHSEHVTNVRFSHDHTRVMTTGGGDQAIFQWQFFPKGADADASLAGNNEEDSTAPSQSAPSAAAVTSVESNDEASDSDLSDARSLDSDVENERQRDYDRPVYKEDIKARRTLKTAAAAASAFAPAAGGGGVGGTQAAAAPAAHGFDSAQEHSSPSAGTRHPAPTDCLRLEWVHGYRGYDCRDNVHVTASGTIAFHAAAVGVVLDTKAWTQKHYTQHTDDILCMAMHPKGTLVCTGQIGRDPVAHVWDADTLETVSVLKGGHTRGICAADFSADGSKVVTVGIDDAHMLVVWDWKKGAQLASARGHGDKIFVARWNPHAENQIVTCGVRHIKFWTVVGGGLTSKRGTFGDIAGLDTILSCAFGSNGELFTGTQGGKIIQWQGNVVSAAYEAHKGPVFALCATADGFVSGGKDGAVTLWDRKFTPQHQFRLAGSGSGSGSGSEGGEGGAPCVRAVCSLGKGRLVVGTKGGEIMEVDKNGEAKTLVNGHMEGELWGLATHPEMDIFATTSDDMHVRLFSLKEHRMIGSRYLGKGSRSCAFSPDGKYLAIGFRDGSFSVAEAKTLKELHKFQHRKEVIGDIRFSPNGKYLAVGSSDNFVDIYNTLDHKRIGICKGASSLITHVDWASNSKLLMVNSGAREQLYFEAPRGARRAIPSDVSKEIKWADWTCVLGKAVEGIWPEGSDVTDVNAAHLSKDGTLLATGDDFGFVKLFQFPVVGRHAKFKKYMGHSAHVACVRWSAKGDKLMSAGGADASVLVWARVSQDGAAVGGTSGGDAKSKSAPAGSDSTSAVDSEDSEISAGEDGFDSDVDRECRIDYGAATYASPLRDMKGVRPHMRPQQPTGPPPAKKFSRAPSAPRAMRVTGTPAREAAAQSVAPEQGGAGASSLAPPQSASRSRSRSSSPDPRSAAAGEKGDKERPRSSRAPLAHVDDLSLEFVFGYRGYDARNNMFYASDGAIVFHAAGVGIVYDPQRNRQNFYVNHTDDIICMAPHPTGSLVATGQIADVPTVHVWETDTQKQRAVLKHTHHGRGVCSVAFSGSGKRLLSVGVDDAHTVSVWRWGRGELLASAPGHTGRIFVGQFRPDSEDRFVTVGIKHVKFWVVVGGVVLQ* # ORIGINAL: g1743.t1 original gene structure, not modified by PASA NODE_3267_length_3876_cov_37.4341 AUGUSTUS gene 1098 3692 . - . ID=g1743;Name=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS mRNA 1098 3692 . - . ID=g1743.t1;Parent=g1743;Name=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS exon 3129 3692 . - . ID=g1743.t1.exon1;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS CDS 3129 3692 . - 0 ID=cds.g1743.t1;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS exon 2474 2755 . - . ID=g1743.t1.exon2;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS CDS 2474 2755 . - 0 ID=cds.g1743.t1;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS exon 2096 2176 . - . ID=g1743.t1.exon3;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS CDS 2096 2176 . - 0 ID=cds.g1743.t1;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS exon 1098 1688 . - . ID=g1743.t1.exon4;Parent=g1743.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS CDS 1098 1688 . - 0 ID=cds.g1743.t1;Parent=g1743.t1 #PROT g1743.t1 g1743 MINTEVGLATEGGQKPHFNANMGIEHNRLQLVTRTPQPAPTTSAATLAAASGATVSTIDTLDWMLSYTAKRFWNAHLHRRLVSADLPPWAADRSWEWNDFFQLLLYEPQSEELEAYKSEPRSLLLWQRSSPSANGDTCGNGVEQTRGVAATFAEYVEGRKFDRVLYNMELQQSCEGSAPKRVCRLLLDAQALASIDVEAVPASPGSRDNHEVQHPGGSQVSTLPTSAVPTAPAPLVSPTKYSCTVTLDVANAAAPVTAGGKKSPSESTPASLQTVAADAASRAASSKRDAIQRPAHPGAASPKSPKSAKASGGGRRLASTARQSSADPTVDTPLQKIEDNCDFIKEQYDAMENVNDAGHKFLARVRCIQQSNTVLRSAINCGRISDKRQEAVKVPLDTLSATLHTFKAMVESYSTRRNFYKYIHTQGSQKKIEGIADQLSDDIRDLQLALGIIANVGDDTDTQDDPADVWANLDRLHNFDFDETKLAAVATKQSQRTTGRKGLSR* # ORIGINAL: g1742.t1 original gene structure, not modified by PASA NODE_3267_length_3876_cov_37.4341 AUGUSTUS gene 76 264 . + . ID=g1742;Name=g1742.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS mRNA 76 264 . + . ID=g1742.t1;Parent=g1742;Name=g1742.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS exon 76 264 . + . ID=g1742.t1.exon1;Parent=g1742.t1 NODE_3267_length_3876_cov_37.4341 AUGUSTUS CDS 76 264 . + 0 ID=cds.g1742.t1;Parent=g1742.t1 #PROT g1742.t1 g1742 MLKYPTIADYRQSVIELDEKEYTNLRMCIVDLRNNYAILNDMIHKNIDKIRKPRNTNTQTLY* # ORIGINAL: g3985.t1 original gene structure, not modified by PASA NODE_2835_length_5012_cov_42.9451 AUGUSTUS gene 2327 3871 . + . ID=g3985;Name=g3985.t1 NODE_2835_length_5012_cov_42.9451 AUGUSTUS mRNA 2327 3871 . + . ID=g3985.t1;Parent=g3985;Name=g3985.t1 NODE_2835_length_5012_cov_42.9451 AUGUSTUS exon 2327 3871 . + . ID=g3985.t1.exon1;Parent=g3985.t1 NODE_2835_length_5012_cov_42.9451 AUGUSTUS CDS 2327 3871 . + 0 ID=cds.g3985.t1;Parent=g3985.t1 #PROT g3985.t1 g3985 MVVPHPVLQHCGFGIKVGNDIAVVDAPTNVAHGDTGHHNQLTADALLNGVGSWKADGAVCDNNMAQQLKSRSDAELFADMFLNKEFNSATNGPPPSAGLGGFSGGDLWGPDFFDIMQKEVAIDASSDALTYGGDDSMVPSIVVPDSKPPALKRSLSTGPTLTALNSKRPRLSMDTPDLQTQQSNTGQVDLGALDQFDVQSVAELFLGHHRQQQLQQQQQQQPTGQQLPAAQLDSSRGSQQQQSAAAAARASLATTGMLIPSVSITHTPTSPVQQVPAAARAHMPHPPPRTGTTVVGVLPQSDSTIVTGSAVTPAAVSSPKAPTSRQKAKAQAKKDAAAQPRASNATAIKKEENGQGSLRTKKGIVPPPPARLVHIPMPVHSAFAQQQQAKKRAAATPPTRKATVAEMAAMRLSNAGAYDDDDDDSSSEAEFVGAERGGGGPNRLDKQERKKLRNRKASRLCRLKKKLYVQNLEAQCDELSEKNGELQDKIARLERQNTRLSDELERARIESRPG* # PASA_UPDATE: g3212.t1, single gene model update, valid-1, status:[pasa:asmbl_4206,status:12], valid-1 NODE_2391_length_6442_cov_43.7272 . gene 327 2416 . - . ID=g3212;Name=g3212.t1 NODE_2391_length_6442_cov_43.7272 . mRNA 327 2416 . - . ID=g3212.t1;Parent=g3212;Name=g3212.t1 NODE_2391_length_6442_cov_43.7272 . five_prime_UTR 2347 2416 . - . ID=g3212.t1.utr5p1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . exon 2302 2416 . - . ID=g3212.t1.exon1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . CDS 2302 2346 . - 0 ID=cds.g3212.t1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . exon 2089 2183 . - . ID=g3212.t1.exon2;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . CDS 2089 2183 . - 0 ID=cds.g3212.t1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . exon 1543 1726 . - . ID=g3212.t1.exon3;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . CDS 1543 1726 . - 1 ID=cds.g3212.t1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . exon 1174 1334 . - . ID=g3212.t1.exon4;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . CDS 1174 1334 . - 0 ID=cds.g3212.t1;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . exon 327 856 . - . ID=g3212.t1.exon5;Parent=g3212.t1 NODE_2391_length_6442_cov_43.7272 . CDS 327 856 . - 1 ID=cds.g3212.t1;Parent=g3212.t1;3_prime_partial=true #PROT g3212.t1 g3212 MRAAIIFVAACLIAGAFAKPTLKYNTGATVKDGKLNVHLVAHTHDDVGWLKTVDQYYMGSMNYIQHAGVQYIIDSVMKSLTQDPNRKFIYVEIAFFSRWWNEQSDETKDLVRGFVREGRLEFINGGWCMNDEATTHYVDIIDQMTLGHRFLMEEFGVRPRIGWHIDPFGHSNEQASLFARMGFDGFFFGRIDYQDKNTRLAAKNMETIWKGSSSLGAESQIFAGTLFNGYGPPDGFCFDQFCDDAPIQDDERIEDYNVKDRVDAFVAAALDQASHYKTDHIVMTMGSDFQFENANEWFKNLDKLIHYVNLDGRINALYSTPSIYLDALHASNQTWSTK # ORIGINAL: g3213.t1 original gene structure, not modified by PASA NODE_2391_length_6442_cov_43.7272 AUGUSTUS gene 3004 6271 . + . ID=g3213;Name=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS mRNA 3004 6271 . + . ID=g3213.t1;Parent=g3213;Name=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 3004 4383 . + . ID=g3213.t1.exon1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 3004 4383 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 4672 4836 . + . ID=g3213.t1.exon2;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 4672 4836 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 4991 5092 . + . ID=g3213.t1.exon3;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 4991 5092 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 5346 5471 . + . ID=g3213.t1.exon4;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 5346 5471 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 5645 5795 . + . ID=g3213.t1.exon5;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 5645 5795 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 6008 6180 . + . ID=g3213.t1.exon6;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 6008 6180 . + 2 ID=cds.g3213.t1;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS exon 6257 6271 . + . ID=g3213.t1.exon7;Parent=g3213.t1 NODE_2391_length_6442_cov_43.7272 AUGUSTUS CDS 6257 6271 . + 0 ID=cds.g3213.t1;Parent=g3213.t1 #PROT g3213.t1 g3213 MDFDDIFDVFDGRKSADAKKDVAPKRIKRPVTAVNSERPANPDDMVVDGHGGESESASIALAAASDAATLAAADAKRKRTDADAANHADGNHSDDEGADAKKPRLEGVDGASSMVEMELGRKEKEAEMARMPGSRIVHVVHTERCLHEAAVPDGVELKARSTYAMPEKPAKTYPFTLDPFQSESVICLEANESVLVSAHTSAGKTVVAEYAIAMSLRDKQRCIYTTPIKALSNQKYRELFEEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEVHYMRDKERGVVWEETMILMPDNVHYVFLSATIPNARDFAEWICRLHRQPCHVVYTDMRPTPLQHYIFPAGGDGLHLVVDEKNEFREDNFQRAMAVLSDAAEAPKSAGGKGSRMQKKNGTDIYKIVKMIMERNYQPVIVFSFSKRECETYALQMSKLDFNSDDERKLVDEVFNNAIDQLSDDDKRLPQVDHILPLLRRGVGIHHSGLLPILKEVIEILFQEGLIKALFATETFSMGLNMPAKTVVFTNVRKFDGKDFRWVSGGEYIQMSGRAGRRGLDDRGIVLLMVDEKMEPVIAKGLLKGHSDPLNSAFHLTYNMILNLLRVEEMTPEYMLNRSFHQFQNNAAIPALEKKLKMLEELRDGMEVPNEAQVSDYYHIRQQLHKLSAEMRAIITNPDFAIPFMQPGRLVKYSRR* # PASA_UPDATE: g23.t1, single gene model update, valid-1, status:[pasa:asmbl_9611,status:3], valid-1 NODE_836_length_17100_cov_41.5393 . gene 8721 16161 . - . ID=g23;Name=g23.t1 NODE_836_length_17100_cov_41.5393 . mRNA 8721 16161 . - . ID=g23.t1;Parent=g23;Name=g23.t1 NODE_836_length_17100_cov_41.5393 . five_prime_UTR 15688 16161 . - . ID=g23.t1.utr5p1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 15187 16161 . - . ID=g23.t1.exon1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 15187 15687 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 13603 14987 . - . ID=g23.t1.exon2;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 13603 14987 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 13309 13408 . - . ID=g23.t1.exon3;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 13309 13408 . - 1 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 12993 13092 . - . ID=g23.t1.exon4;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 12993 13092 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 12577 12676 . - . ID=g23.t1.exon5;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 12577 12676 . - 2 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 12329 12458 . - . ID=g23.t1.exon6;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 12329 12458 . - 1 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 12062 12149 . - . ID=g23.t1.exon7;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 12062 12149 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 11727 11843 . - . ID=g23.t1.exon8;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 11727 11843 . - 2 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 11207 11328 . - . ID=g23.t1.exon9;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 11207 11328 . - 2 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 10788 10961 . - . ID=g23.t1.exon10;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 10788 10961 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 10502 10597 . - . ID=g23.t1.exon11;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 10502 10597 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 10163 10288 . - . ID=g23.t1.exon12;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 10163 10288 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 9744 9848 . - . ID=g23.t1.exon13;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 9744 9848 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 9249 9403 . - . ID=g23.t1.exon14;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 9249 9403 . - 0 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . exon 8721 8962 . - . ID=g23.t1.exon15;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . CDS 8842 8962 . - 1 ID=cds.g23.t1;Parent=g23.t1 NODE_836_length_17100_cov_41.5393 . three_prime_UTR 8721 8841 . - . ID=g23.t1.utr3p1;Parent=g23.t1 #PROT g23.t1 g23 MSSRRSRSSSIASMFSGSLSSSVSSSNGLAPSPTPLSKPGGLEDINEDDIAALDERIEMEEATLESLTSTIERFYDSPDTLLDECFNQNQKVKRLKQYRDQVVKRRTTDLTGASNADGATDGVDPRIATLRMELQSAKSALMEVIMKLEQYYDTPPALDREYKAKRKEMDEIEARIKHLRESMSRDAHAAAKAVAAAAEAAQSESSRELSVSADSSDKDKKGKKRGIFSALRWRSSRQASLEAHDFPMTRAASMPDVSHDVKMPTVPRMSEPQLASPRRSRHMNIAETGSLNAQQQDGMRQRVRTVSAETPVSQARTASRLSGLEESGGQTDARPTSPMSPRRLSAENPTSPLPSKKKNSPFATVKGRISGLRKNNPMSSSLEMLSESKSSSTEGVSIGQGVGSSDVFSSVSRASIASTASSSLSFADLPHDERLAKAELRATIVGPAMRRVLLRDHTFTLALLDASPEDDVVRSVIDIVMEESDSTMAGTPMIVQQAIKAAVKSAKGASQLFAKHDANSRVIKEYLERIGFVYRAEVLSSIVDRVSCTGGSYELATDRLGPKEAVEENMRLLAGSCAFAVDAIVASAGVAPPLLRDLCRRIKEECDAAFGAETPKVGLTATAEWLMHRFMVPGLCVPENFGASKRTIASATMRRNLMLIAKVLMAAAATEPHGSRPNARDVTLTMLSKQIELWQSHVSMYTSDLASTVSMALATPVQSVLERYQSTGRIDAATRATCGSQMAVILAGVSSEIEQIAHIIGKDNGLSAKAKASAMESLSYVTRLLDLFEEPNLRSESLEGPGRTWRDVIGGQMYDMTAPTIRRRQEAIVELANTERQYLSDLKLTRDLHYECLRHMLPRDRLDLIFHNFMELIPLHTQLVKDFTARQALNGGLVDCVGDLFLANLPKLEVYILFVAGQSHARVEIQRLKENREFNEFLEGSLDLPKTRKLPLWNFLMQPKQRLMKYKLLLQEIHKNTPADHPDRVQLGEAIGKMDSLLLIINRRLSESEAILKAKGMAQSSGFLIKPTEEEEAEAAAATENLKAELIKMIATDKQRLADLAEKIEQCYNVPETVERRFDALEGGIRELERRLSILNAGGSLPGLHTHKRQGSASSLSGSGSGSAHLRRSTAPQTISETD* # ORIGINAL: g24.t1 original gene structure, not modified by PASA NODE_836_length_17100_cov_41.5393 AUGUSTUS gene 16677 16991 . - . ID=g24;Name=g24.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS mRNA 16677 16991 . - . ID=g24.t1;Parent=g24;Name=g24.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 16677 16991 . - . ID=g24.t1.exon1;Parent=g24.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 16677 16991 . - 0 ID=cds.g24.t1;Parent=g24.t1 #PROT g24.t1 g24 MFGHLVPPLVVVEEEESDDGSDDGGDAAVVADEETRKRGQDILIELLERAHLEHGAVHLGWTLEHSSVSAAAGGAQAGGAGQAVDVPVDPVTADFFKHFGMQIV* # ORIGINAL: g22.t1 original gene structure, not modified by PASA NODE_836_length_17100_cov_41.5393 AUGUSTUS gene 3863 8338 . + . ID=g22;Name=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS mRNA 3863 8338 . + . ID=g22.t1;Parent=g22;Name=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 3863 3966 . + . ID=g22.t1.exon1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 3863 3966 . + 0 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 4304 4540 . + . ID=g22.t1.exon2;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 4304 4540 . + 1 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 4957 5352 . + . ID=g22.t1.exon3;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 4957 5352 . + 1 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 5599 5657 . + . ID=g22.t1.exon4;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 5599 5657 . + 1 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 6091 7404 . + . ID=g22.t1.exon5;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 6091 7404 . + 2 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 7699 7779 . + . ID=g22.t1.exon6;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 7699 7779 . + 2 ID=cds.g22.t1;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 8136 8338 . + . ID=g22.t1.exon7;Parent=g22.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 8136 8338 . + 2 ID=cds.g22.t1;Parent=g22.t1 #PROT g22.t1 g22 MFDDIVDGSVQLAIFTTSLSAEGSDGDILRHILERRCYIVAEYEHEEHPCLIASRGTKLHQLTAVKTVQLDVKSDAQSDVCIDKDVLGEGVTIEPIYDIVHECNSLRQSRNGKVAIVGNHRLARLHRLDVIKHLRPRTPSTFVILANTQRIPYLALQTTRPSKMSVVYDLKDAPGSLFRSVAPFVLRGINVTHVECNARHSGGHVGGSRVGAGMPGSREEALRMLESSWKGASLNSENDVSVTSNRLSMATQDATDKAVCMLSFDGTAGLSLCADALRDLSEFCGRTRAFGPYPMAYRTSASGTCCRAAANLSRAVVEYANRSHLSPLHSDFKDSEESAENCTDFLSMLPEEVSRHILEMLCMDVRDIVAAARVCQRWQYLCSDGLLWRKCCQHAGLLSEPQTPWKWPALPPLSLRASVSRDAHDWSPRFDPRGCAIDHDLEPLGDWRGFYRRCVSDAESPLNCGAGNGHVLRRALMRTGHTSQYGCVSIGPSAVSGSRTVYGVTWIGEVHSYDALLAAPIGEGPCPALPRYGRTTGWGMCVGVGFAVVHDVSGASFLTIGSDGVIDSNTAISSMLIDGVVLSVAARGTAFAVVSDWEIACYEVLAEASAVSGRSPYVRLWATSLLDAFAVVDSFRFSVSLCGECVVVVEPSQSPCAFAWRDGHMLRRPAFLSGEAVDDVNPRSVASAPDGHLTAAAGSGGIVVTDDRGHVIWSSDVPSSRVMTNGSVVIALTLAAQVTIDISAKLHVHHAHTGHCVGSLTSLCEAFAWDGGRFVASIERSALVLFDCNPSTPRGST* # ORIGINAL: g21.t1 original gene structure, not modified by PASA NODE_836_length_17100_cov_41.5393 AUGUSTUS gene 1187 2395 . + . ID=g21;Name=g21.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS mRNA 1187 2395 . + . ID=g21.t1;Parent=g21;Name=g21.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS exon 1187 2395 . + . ID=g21.t1.exon1;Parent=g21.t1 NODE_836_length_17100_cov_41.5393 AUGUSTUS CDS 1187 2395 . + 0 ID=cds.g21.t1;Parent=g21.t1 #PROT g21.t1 g21 MNQMAWSPVGNMLEQLPLDPLITIIETYVAAQQPRAVIALGASSHALRTFVWQTHSLWVRMARMANVEAPTRDEWLSLNQSDKWRWFVENIATGLCAACRIAWAEPYRYWQGSSYTKWSTRSKVACDLCKPLFRQIPRSYARSDYNIPDDLLESFVPCEFTMNPNGFEDSFSPMRLYYARDLMAVGEDIYGSRSAHETARKDEVARRVMLKEWRKRAEEEEKQYLATRRQGKDPIEKLKIRVFAPMVTLPRLQLVERATEWDMRKVGVPIRLCKRAAAIVNAAKEGREEAEENGTDPDVAVALMVSEGVMRPNRKRKAVDGTEAATKEEEGESGEKGESVAGAAVVVDSPASTCRSVRQRRKADADISAVPSTENVVANVTPAAAVETIGISTGRTRSARKR* # ORIGINAL: g9051.t1 original gene structure, not modified by PASA NODE_2510_length_6042_cov_45.9499 AUGUSTUS gene 21 1562 . - . ID=g9051;Name=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS mRNA 21 1562 . - . ID=g9051.t1;Parent=g9051;Name=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 1455 1562 . - . ID=g9051.t1.exon1;Parent=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 1455 1562 . - 0 ID=cds.g9051.t1;Parent=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 1061 1288 . - . ID=g9051.t1.exon2;Parent=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 1061 1288 . - 0 ID=cds.g9051.t1;Parent=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 21 972 . - . ID=g9051.t1.exon3;Parent=g9051.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 21 972 . - 0 ID=cds.g9051.t1;Parent=g9051.t1 #PROT g9051.t1 g9051 MAMRTAHSPRTAGVGRLGAIIIVALTILACLVDNTKAQGGSITVTIVRGYFYYSPNYGYCCDPYFKTFTLTNGAQTSQSSSCGSTSAVSSSSGGTITFGRTCTLTFSGSSLQLQILISVYDEDALIVDTYLGSTGTESYATGSIPATATLPVTGGYGTNSVELSFSTTCNANYYGNACNVFCQASSTCNGRGTCTTTGTCTCTTSGWTGTNCNACATGYWGASCTACNCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCSASGTCTCATGWTGASCNTCDTGYWGASCTACNCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCSVSGTCTCATGWTGASCNTCNTGYWGASCTACNCLNGATCSQGIGGTGACTCAANYYGTTCATNCVAATTCSGHGTCSAS # ORIGINAL: g9052.t1 original gene structure, not modified by PASA NODE_2510_length_6042_cov_45.9499 AUGUSTUS gene 4180 5509 . - . ID=g9052;Name=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS mRNA 4180 5509 . - . ID=g9052.t1;Parent=g9052;Name=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 5359 5509 . - . ID=g9052.t1.exon1;Parent=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 5359 5509 . - 0 ID=cds.g9052.t1;Parent=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 4661 4855 . - . ID=g9052.t1.exon2;Parent=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 4661 4855 . - 2 ID=cds.g9052.t1;Parent=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS exon 4180 4298 . - . ID=g9052.t1.exon3;Parent=g9052.t1 NODE_2510_length_6042_cov_45.9499 AUGUSTUS CDS 4180 4298 . - 2 ID=cds.g9052.t1;Parent=g9052.t1 #PROT g9052.t1 g9052 MMPRSVAVPGQTPAPQTAQEKAVAEAKKKKIIRTAAGQTWEDDSLADWDEADYRIFVGDLANDCTDDQLIRAFQKYPSFLKAKVVRDRRTQKPKGYGFVSLRDKDDFVRAMREMNGKYVGSRPLKLRKSAWKDRNMDFRQEKEKAKNAVGLVGK* # ORIGINAL: g8131.t1 original gene structure, not modified by PASA NODE_3843_length_2645_cov_29.5276 AUGUSTUS gene 40 2475 . + . ID=g8131;Name=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS mRNA 40 2475 . + . ID=g8131.t1;Parent=g8131;Name=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS exon 40 202 . + . ID=g8131.t1.exon1;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS CDS 40 202 . + 1 ID=cds.g8131.t1;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS exon 632 771 . + . ID=g8131.t1.exon2;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS CDS 632 771 . + 0 ID=cds.g8131.t1;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS exon 1128 1240 . + . ID=g8131.t1.exon3;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS CDS 1128 1240 . + 1 ID=cds.g8131.t1;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS exon 1523 1674 . + . ID=g8131.t1.exon4;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS CDS 1523 1674 . + 2 ID=cds.g8131.t1;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS exon 2131 2475 . + . ID=g8131.t1.exon5;Parent=g8131.t1 NODE_3843_length_2645_cov_29.5276 AUGUSTUS CDS 2131 2475 . + 0 ID=cds.g8131.t1;Parent=g8131.t1 #PROT g8131.t1 g8131 IRELKTDRIGQLVTISGTVVRSSEVRPELIRGTFQCVDCRFIISDIEQQFKYTEPSVCPNPQCQNRTRFQLLVDQSRFVDWQKIRVQENSNEIPSGSMPRSLEIILRHEAVEKAKPGDRCLFTGSLIVVPDVAQLFQAGSGVESNAGGSSRSREGYSAEGVQGLKALGVRDLTYKLCFLGCTVQAADAKFGGFNVRDEAGAADVVEDLSIEDQTHILRMKEDPHLYQRVVSSIAPAVFGHEEIKRGVLLMLLGGVHKKTQEGISLRGDINVCIVGDPSTAKSQFLKWVAIVALSIWEETACAL* # ORIGINAL: g5846.t1 original gene structure, not modified by PASA NODE_1612_length_10186_cov_42.6394 AUGUSTUS gene 94 1688 . - . ID=g5846;Name=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS mRNA 94 1688 . - . ID=g5846.t1;Parent=g5846;Name=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 1521 1688 . - . ID=g5846.t1.exon1;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 1521 1688 . - 0 ID=cds.g5846.t1;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 1179 1311 . - . ID=g5846.t1.exon2;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 1179 1311 . - 0 ID=cds.g5846.t1;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 567 994 . - . ID=g5846.t1.exon3;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 567 994 . - 2 ID=cds.g5846.t1;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 94 307 . - . ID=g5846.t1.exon4;Parent=g5846.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 94 307 . - 0 ID=cds.g5846.t1;Parent=g5846.t1 #PROT g5846.t1 g5846 MSSGRMKKKRDEESDGEEEDFDDAADRGVDDEDDEEDEDGADNGSADDDEGEKKSKKRKKTDGRRRKRPRRENFLLDEAEEGSEDEDEEEDYEGERALAEKQMSQLPSGPGGVAQFKEKLSDMEARYAQQEERQREKEREREKRREAKEKEREARRAERIAAAAARVAAGGEAPKDDEDGVGKEDMEDFIESEEDDLSEEELSADDDDEAMEGAGYADQFADHVRNKELPTINDPSLWIVKCEPGMERDVTIALMRKCSEQKNKGDPFQIKSVIHVGHLKGYIYVEAIKQDHVRKASGVCWNRAAIGKTYIGVT # ORIGINAL: g5848.t1 original gene structure, not modified by PASA NODE_1612_length_10186_cov_42.6394 AUGUSTUS gene 4540 5525 . - . ID=g5848;Name=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS mRNA 4540 5525 . - . ID=g5848.t1;Parent=g5848;Name=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 5398 5525 . - . ID=g5848.t1.exon1;Parent=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 5398 5525 . - 0 ID=cds.g5848.t1;Parent=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 5102 5256 . - . ID=g5848.t1.exon2;Parent=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 5102 5256 . - 1 ID=cds.g5848.t1;Parent=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 4540 4673 . - . ID=g5848.t1.exon3;Parent=g5848.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 4540 4673 . - 2 ID=cds.g5848.t1;Parent=g5848.t1 #PROT g5848.t1 g5848 MTTHEDMEVDADERNATNNNDEIEDGGKATPGVAQLPFARVKRIMKSDNDVATVSQETVFLVSKATELFVEFLAKEAYGKSKTDKRKTVQYKDVDIVPKQVPVRTIMASLKAGKKTKGAVTADGAEVDEPAVEREDEQ* # ORIGINAL: g5850.t1 original gene structure, not modified by PASA NODE_1612_length_10186_cov_42.6394 AUGUSTUS gene 8426 9800 . + . ID=g5850;Name=g5850.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS mRNA 8426 9800 . + . ID=g5850.t1;Parent=g5850;Name=g5850.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 8426 9449 . + . ID=g5850.t1.exon1;Parent=g5850.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 8426 9449 . + 0 ID=cds.g5850.t1;Parent=g5850.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 9724 9800 . + . ID=g5850.t1.exon2;Parent=g5850.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 9724 9800 . + 2 ID=cds.g5850.t1;Parent=g5850.t1 #PROT g5850.t1 g5850 MLVNVVYLHMCPNGSSENKKINLDGLSRLEKIKDLRGLLEERAGVPRDLQRLFFRGKQLEDLIDVHAITKDATLFDYLISQNDTIQLFIKRDLGSGADSQDASQLPSAHNTPGTQNNASPRVANASAVESSATKAPATPARTPQARALYKVGERVEALDADNGAWFDASIESVTCDDSVDGGWSYGLRFDDYPDDKVVHPAANIRPRSTRRLKASDVAPGDLVLANYNEEDERDCGFWYVGRVTRVVPDDKAKGREAVLSATVYVRLVKGQDDASAPEVHAWRNEIYALERRTCAQEMTPSPDAKGNVAGTQYGDDGAGASGGAAEGFPDVPDEDDELDPQGWECDTCKVQPSKECRKCGCTLCASK # ORIGINAL: g5847.t1 original gene structure, not modified by PASA NODE_1612_length_10186_cov_42.6394 AUGUSTUS gene 2398 3955 . + . ID=g5847;Name=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS mRNA 2398 3955 . + . ID=g5847.t1;Parent=g5847;Name=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 2398 2622 . + . ID=g5847.t1.exon1;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 2398 2622 . + 0 ID=cds.g5847.t1;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 2756 2899 . + . ID=g5847.t1.exon2;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 2756 2899 . + 0 ID=cds.g5847.t1;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 3028 3311 . + . ID=g5847.t1.exon3;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 3028 3311 . + 0 ID=cds.g5847.t1;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS exon 3532 3955 . + . ID=g5847.t1.exon4;Parent=g5847.t1 NODE_1612_length_10186_cov_42.6394 AUGUSTUS CDS 3532 3955 . + 1 ID=cds.g5847.t1;Parent=g5847.t1 #PROT g5847.t1 g5847 MSRRSSPTRAGSRGKGSPSKKDDAAKPTGPLEPSDVVRGWADTYQKRALATQTPTIPSALNLMYEAIGDNMFLSKLVFQSKQTVLKEGALACLFASARSVFYSHLTMIYFWRLAVSEDDVEALGHFLSKYGYIHTLELINNDFSLRCAIKLGSMLALNRGLRTLVLDLNVFGPSALASISAGLCTPGVGIQTLSLNYCQCGPDGAQHLAAIIRGSTVRELRLDGNKLRSAGAKEVLGALCDNHTVEILSLADNMIDLEPSIQAMTAFRQALSTENAILKVDLDMNLLSPRAAGLVLEGLSERRLRRYRGVDIRVTHRLPTAILDNFDKLCERLIEPKTRRKKSAGKGGRGGSGSGRRK* # PASA_UPDATE: g5849.t1, single gene model update, valid-1, status:[pasa:asmbl_2142,status:12], valid-1 NODE_1612_length_10186_cov_42.6394 . gene 6293 7848 . + . ID=g5849;Name=g5849.t1 NODE_1612_length_10186_cov_42.6394 . mRNA 6293 7848 . + . ID=g5849.t1;Parent=g5849;Name=g5849.t1 NODE_1612_length_10186_cov_42.6394 . exon 6293 7848 . + . ID=g5849.t1.exon1;Parent=g5849.t1 NODE_1612_length_10186_cov_42.6394 . CDS 6293 7801 . + 0 ID=cds.g5849.t1;Parent=g5849.t1 NODE_1612_length_10186_cov_42.6394 . three_prime_UTR 7802 7848 . + . ID=g5849.t1.utr3p1;Parent=g5849.t1 #PROT g5849.t1 g5849 MQYLLVLIVAMLCANTHGPVTVNAASTSCTSCSALELQVCASCGSWFCSYQSINGVASCTYTCPCAGSGTGTSGGTSGSGGNSGSSGSGNGGASTDVGTACNSCSELKSRVCASCASWSCSFHSINGVASCSYTCPCSAGTVNPGSSGDGCVTHTSDGTLSDPAVSNFKSQEFWIAAAIIAGFMGLEWAVQWLLFDKKLIITHCLSKETANNNNIRVAKATLVDQRKSDAVAAWRNAPSSWCDVPAWLCSTSRLINESIWFLLKLFFVDDMWEPTSILSFFKERVELLAMFWGNDLAYRRTLRRAAFAMKCAGQLGFAVIFESLNSGSSSKSVNCVGGAFTSTSTSSQTDGIGFEVNRDIGVTLLVSAASYGLGWLADNHGRLAHDLHKPKVGMVALPLIGALWFIGAAIAKAVMGGGAYILLYFLVFIVSIALDIAKDIIQSVVVFCIGQFLYPRVTSPAPIQAVTEEEVAAFVVSQRNDAPEKRRNRYFSPKVNKIDVEL* # PASA_UPDATE: g11142.t1, single gene model update, valid-1, status:[pasa:asmbl_2196,status:12], valid-1 NODE_1629_length_10131_cov_40.7635 . gene 285 3136 . - . ID=g11142;Name=g11142.t1 NODE_1629_length_10131_cov_40.7635 . mRNA 285 3136 . - . ID=g11142.t1;Parent=g11142;Name=g11142.t1 NODE_1629_length_10131_cov_40.7635 . exon 2705 3136 . - . ID=g11142.t1.exon1;Parent=g11142.t1 NODE_1629_length_10131_cov_40.7635 . CDS 2705 3136 . - 0 ID=cds.g11142.t1;Parent=g11142.t1 NODE_1629_length_10131_cov_40.7635 . exon 285 2575 . - . ID=g11142.t1.exon2;Parent=g11142.t1 NODE_1629_length_10131_cov_40.7635 . CDS 285 2575 . - 0 ID=cds.g11142.t1;Parent=g11142.t1;3_prime_partial=true #PROT g11142.t1 g11142 MSAETNTELMRDLQKRLVRTKATCDEELNTMIEYLASDLENLTDDTMESEFFAALEQLHGLALQLLQTDMRNLNGNMCRKLVSAAQALQTEWKDAWQCRHYVTTMLLAFSRVSRVVDQMENINGSGTATGGHATHTAGPDSLVKVASVEIFDSRPSRLTADHGDISESRLPTPLGNVDDRRSPSGTSAIEVSELDLTLCRICEGHVSRDVLRNHSRYCAVVQRNVVEIESCDELLLTLLSTMERRAYNLAHGAQKGSTNPDEIASLESLIAVIKAALDLESARDVRGERSRLAGLVDAFSANAELSALARRLANVIGRKAAAVQAKQQTIAEAGSLLPRESYTADRSMPCIKDFSFLKTISRGSFGHVYLTRKRITGDYYAIKVLKKKDLVRKNQVESIKNERNILTMLNSPFVTKLYYCFQSVDYLYIVMEYANGGDLFSLLRSVGALDESWARFYIAEVVVALEHIHAMGIVHRDIKPDNLLINKDGHIKLADFGLSRTGLGECHWVSVLEKATGNLRAADDSATPTRKSSLGRRRGSIVGTGDKPTNRVAPMPSATANRSGSVLLSLESRRSIYQERCRRSALYSCVGTSDYLAPEVILGIGHDTAVDWWATGVCLYEFLSGAPPFFQPDLQDTFANILERNIEWPDEVSPLARDLINRLLTVDVDRRLGSRGAAEVKTHPFFIGLDWQNLAFSQAAYVPVVSDFEDTSRFAPGLRAETATTLNPDTRNQSIGGSSIRTADGEGASVSIPRSASAARGSGGRSSSDETNAIGGSGEPDPQAAIAGDPFGDFRFKNCNLLDDVNQRIGATPLLPDASIAGMRRDSRSSESIGREIDRHLDCLVAEDNPVTQRIVDALLKQIGISVTQALDGSAAVKAASLRKYDMIFMDIMMPGMDGEQATELIR # PASA_UPDATE: g11145.t1, single gene model update, valid-1, status:[pasa:asmbl_2195,status:12], valid-1 NODE_1629_length_10131_cov_40.7635 . gene 8646 10044 . - . ID=g11145;Name=g11145.t1 NODE_1629_length_10131_cov_40.7635 . mRNA 8646 10044 . - . ID=g11145.t1;Parent=g11145;Name=g11145.t1 NODE_1629_length_10131_cov_40.7635 . five_prime_UTR 9953 10044 . - . ID=g11145.t1.utr5p1;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . exon 9826 10044 . - . ID=g11145.t1.exon1;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . CDS 9826 9952 . - 0 ID=cds.g11145.t1;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . exon 9524 9604 . - . ID=g11145.t1.exon2;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . CDS 9524 9604 . - 2 ID=cds.g11145.t1;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . exon 8646 9199 . - . ID=g11145.t1.exon3;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . CDS 8985 9199 . - 2 ID=cds.g11145.t1;Parent=g11145.t1 NODE_1629_length_10131_cov_40.7635 . three_prime_UTR 8646 8984 . - . ID=g11145.t1.utr3p1;Parent=g11145.t1 #PROT g11145.t1 g11145 MQPAPRGEPVRELKLPLNLAFHAVQPIDVLHLGSNEFLLCFNNIGLFIDKDGRQSRDFHLKWNVFPQFVVYAYPNILAFSAIAVEIRTVLNGNLVQSIPVQTSHLLTVRNSKKHVYVSNTVQGSSGSSIFKISYVPKDAE* # ORIGINAL: g11144.t1 original gene structure, not modified by PASA NODE_1629_length_10131_cov_40.7635 AUGUSTUS gene 7807 8340 . + . ID=g11144;Name=g11144.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS mRNA 7807 8340 . + . ID=g11144.t1;Parent=g11144;Name=g11144.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 7807 8340 . + . ID=g11144.t1.exon1;Parent=g11144.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 7807 8340 . + 0 ID=cds.g11144.t1;Parent=g11144.t1 #PROT g11144.t1 g11144 MDFPLGIAPEGSQQAIVLEIPVSVVSALSEGHMGGTVQFVIDSRSMLAGECVIPVHTAPQSPVHAQPAACATPPRLHTCCKVDAIGEDEDGRIALKHKGLSSQTVHPHNSKIVLPKERTPALVIDSEKHPLLGAGGRRHRRCCCSRGMCVVTGIGLLQIIVPLLILAGVLVCYLATR* # ORIGINAL: g11143.t1 original gene structure, not modified by PASA NODE_1629_length_10131_cov_40.7635 AUGUSTUS gene 4212 6740 . + . ID=g11143;Name=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS mRNA 4212 6740 . + . ID=g11143.t1;Parent=g11143;Name=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 4212 4235 . + . ID=g11143.t1.exon1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 4212 4235 . + 0 ID=cds.g11143.t1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 4400 4704 . + . ID=g11143.t1.exon2;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 4400 4704 . + 0 ID=cds.g11143.t1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 4941 5016 . + . ID=g11143.t1.exon3;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 4941 5016 . + 1 ID=cds.g11143.t1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 5187 5241 . + . ID=g11143.t1.exon4;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 5187 5241 . + 0 ID=cds.g11143.t1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 5518 5685 . + . ID=g11143.t1.exon5;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 5518 5685 . + 2 ID=cds.g11143.t1;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS exon 6001 6740 . + . ID=g11143.t1.exon6;Parent=g11143.t1 NODE_1629_length_10131_cov_40.7635 AUGUSTUS CDS 6001 6740 . + 2 ID=cds.g11143.t1;Parent=g11143.t1 #PROT g11143.t1 g11143 MSARRAIQFKPLQVAVKIVDKKKIKAESDRVAIMREIDALKRLNHENIIRLYEVYETSDEIYMFMEHAEGGDMYEYMKRKGPLTEFEAKKLTVQIVRALHCCHSSNIVHRDLKPDNVLIDITDTIKLSDFGLCNPDHRKSMSTFCGSHYFAAPEMLLGDQYSGPTADIWSLGVMLYNFLTGQLPFEGQLSVALSQIVSGDYTIPDTVSKSAQDLIRRILTVETTARATLDDVRKHPWFLEDPAYPCTIDPSCSDDSGGVDAALLQSMRAMNFEDTQVRDAIVGNQHNNVSATYHLLARRDRRKSLGVDRPSTPLLSPAGTTGEAVYSSSSPAAVSQPVPLPASRTTADASQASPSGSSLGIGMPSSLNVGTNPIPRSVSPLSFSMSPQTRRVTDRLSSSANPSPPASPTVVEEDEEDGGQLRPFPRSRPTSARISGSFGPRVTEDTRSRPTSAVL* # PASA_UPDATE: g8481.t1, single gene model update, valid-1, status:[pasa:asmbl_3679,status:12], valid-1 NODE_2173_length_7426_cov_42.9872 . gene 76 2818 . - . ID=g8481;Name=g8481.t1 NODE_2173_length_7426_cov_42.9872 . mRNA 76 2818 . - . ID=g8481.t1;Parent=g8481;Name=g8481.t1 NODE_2173_length_7426_cov_42.9872 . five_prime_UTR 2577 2818 . - . ID=g8481.t1.utr5p1;Parent=g8481.t1 NODE_2173_length_7426_cov_42.9872 . five_prime_UTR 2175 2346 . - . ID=g8481.t1.utr5p2;Parent=g8481.t1 NODE_2173_length_7426_cov_42.9872 . exon 2577 2818 . - . ID=g8481.t1.exon1;Parent=g8481.t1 NODE_2173_length_7426_cov_42.9872 . exon 76 2346 . - . ID=g8481.t1.exon2;Parent=g8481.t1 NODE_2173_length_7426_cov_42.9872 . CDS 76 2174 . - 0 ID=cds.g8481.t1;Parent=g8481.t1;3_prime_partial=true #PROT g8481.t1 g8481 MAATMRLLCLATVFLAVLGSSFAEDYVLILPDEESTLEGEPWEATILSNAPSSFEVQRAYADSNVWTTFGTVDRKVTVSSDDNKATIFIREATSRWFVYKFRVLLFPHDEGPRVTTEEFRVSIVPTNQVVFQPPQRNVAEGKRFSVFWQPPGTDYPEFTRIIVRTRGAASGGGTTGYILDMTTSDGGTASLKLTSSVTVNSYWEQISDYCALTFSQSPTTSAEAQTAKTNVAKVVVQAVRDSYPNQDYTFVLASDVQPVRSADKNKEYTIQFYVRSLTTGAPVDNGRVRFALGLAANDQKNANFASEFITRAGSALALDRLTLTLASVNLALVNSFALHKFSTLRSSTNFFIRAQSATELEVKISEFAADENMRWYPVVAGVDGAPVQPFSASQVQWQSVKFPASFISYTITGFTGVGNTEVNVAFTLSAVGSIFTIATQGAFYLTDSGINGDSAYVWAAQRCAEYTSESLLVQNVQACQASTNNPTYRRMEIDLNGFFGVTTVSVQMPNYPFPSDVSLAGALPSGASNSSKSRLELWGSIDGKVYVDLTESVNGARTTCSGGEPAKAGSPCTVAFAVQDFTRSNLVKPGNFGWRYFRIVFGSMERQSDRLLTSDRFFAASEIKFTGYCLCNGHSNKCDYSTGKCYEVDSVTKQVDDLFRCQHKTIGEQCQECEPNTYRNPTNDPPINAYNCDPADPDG # ORIGINAL: g8482.t1 original gene structure, not modified by PASA NODE_2173_length_7426_cov_42.9872 AUGUSTUS gene 3922 7160 . + . ID=g8482;Name=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS mRNA 3922 7160 . + . ID=g8482.t1;Parent=g8482;Name=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 3922 4482 . + . ID=g8482.t1.exon1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 3922 4482 . + 0 ID=cds.g8482.t1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 4703 4870 . + . ID=g8482.t1.exon2;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 4703 4870 . + 0 ID=cds.g8482.t1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 5253 5402 . + . ID=g8482.t1.exon3;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 5253 5402 . + 0 ID=cds.g8482.t1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 5722 5940 . + . ID=g8482.t1.exon4;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 5722 5940 . + 0 ID=cds.g8482.t1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 6145 7066 . + . ID=g8482.t1.exon5;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 6145 7066 . + 0 ID=cds.g8482.t1;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS exon 7153 7160 . + . ID=g8482.t1.exon6;Parent=g8482.t1 NODE_2173_length_7426_cov_42.9872 AUGUSTUS CDS 7153 7160 . + 2 ID=cds.g8482.t1;Parent=g8482.t1 #PROT g8482.t1 g8482 MYGGGAHTGPPAFESSAMAAAGAYGAGGGPNGRFFFRRRRERVNWKNLVTLDLDRVTREVDVATLQMNLENVTFCDIESEDLRFIDPNFVKLFKLAQLTVEYLLHSQEYLASGRDDVDSRVRQLDKTAEELRAALLKKDEEIEALKKENRSRRKLLLSYQTMLNAGANGYYQCSLCKKAFVAHPYLVAHFERRHPGHEPPSAEYPARGPAQSGIVAELQLALSQMTDKLRQTERQLREELDQKVSEERTQLRRREKELEEQQRAERMRHEGELADLRGTFLKEMHQQRLAMEEAFSSHTFRRSRLGPMQDMDDHPTSRPDSASSRQIADLTQTIMNMQMALAERERAWEKKLRRVDEELENSKYNRPLQSEQLPPRATSPAKSTLIMRGSRRHQPPEQPRQPETGTVGTRRAIQLEPENDDVGPVDDNVNVREEPRKMEQQQPQVSQRAQQPIVVQSSTAIGDMEDDADDGALQRGYDAAPQQPTGRMQLAYAPVPGKPFIRSRYDHSTDAVQQQRGMMAQLLTDAVALRKIPRNAEGLGRPEFEAKSAELAEERRKRAGENPQFVHVRTQLDSELNRMAQDTFRFVPPPKQTFRPSLQRSLSAGSGMDQQGQGAMGQQRRMGGGGFGSTPSLNQGYAGGPLPSQAGRESPNPNRASLGKPPMTPSQQRAFGAAV* # ORIGINAL: g3062.t1 original gene structure, not modified by PASA NODE_6088_length_642_cov_43.0335_potentialcontaminant AUGUSTUS gene 101 610 . + . ID=g3062;Name=g3062.t1 NODE_6088_length_642_cov_43.0335_potentialcontaminant AUGUSTUS mRNA 101 610 . + . ID=g3062.t1;Parent=g3062;Name=g3062.t1 NODE_6088_length_642_cov_43.0335_potentialcontaminant AUGUSTUS exon 101 610 . + . ID=g3062.t1.exon1;Parent=g3062.t1 NODE_6088_length_642_cov_43.0335_potentialcontaminant AUGUSTUS CDS 101 610 . + 0 ID=cds.g3062.t1;Parent=g3062.t1 #PROT g3062.t1 g3062 CLTPVQGSSTGGQSSGGSSNIVRIAVGASIGGLAVVGAALLATYVYARRKGKAIGEEQTWSFFNSTRSSSMRSTRPSPAQFLSPMRPESEVGPEVQLGVIGGIAATGGGDGVQYANLALARGSDGVRGGDGGAEIDASADGMRTTYDVIRRKSEDLYATPVYDQVRRPV* # ORIGINAL: g1359.t1 original gene structure, not modified by PASA NODE_5245_length_952_cov_566.304 AUGUSTUS gene 31 952 . - . ID=g1359;Name=g1359.t1 NODE_5245_length_952_cov_566.304 AUGUSTUS mRNA 31 952 . - . ID=g1359.t1;Parent=g1359;Name=g1359.t1 NODE_5245_length_952_cov_566.304 AUGUSTUS exon 31 952 . - . ID=g1359.t1.exon1;Parent=g1359.t1 NODE_5245_length_952_cov_566.304 AUGUSTUS CDS 31 952 . - 0 ID=cds.g1359.t1;Parent=g1359.t1 #PROT g1359.t1 g1359 DTEVEFGGAVARAADAADVSPPSGFGSLKKLGVTIVYGGGDSQPWIVVGTKEKGIVIYQLGINLRLERVGDATAKGPLKFSCRVSGGLSIGGFVFSAYIPINVPGEQMIFVLPEVSVGGINVNELLGLGTEVRIEPTAEGLQKAADGVVGRAKELAAQARAEAERRLEEAKQEAKARVRRLMSQTVEELKARANEMQTLVDGKRILLLGSVVDAVGSSFGVDSTILDTGIAGLPDFRFFGVTDTEVEFGSSVARASNAADASPPSGFGSLRKLSVTIVYGDSKPWVLVPGGGVEVGSFGLFLRVSRE # PASA_UPDATE: g11256.t1, single gene model update, valid-1, status:[pasa:asmbl_7340,status:12], valid-1 NODE_4461_length_1587_cov_38.877 . gene 119 1337 . + . ID=g11256;Name=g11256.t1 NODE_4461_length_1587_cov_38.877 . mRNA 119 1337 . + . ID=g11256.t1;Parent=g11256;Name=g11256.t1 NODE_4461_length_1587_cov_38.877 . five_prime_UTR 119 119 . + . ID=g11256.t1.utr5p1;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . exon 119 196 . + . ID=g11256.t1.exon1;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . CDS 120 196 . + 0 ID=cds.g11256.t1;Parent=g11256.t1;5_prime_partial=true NODE_4461_length_1587_cov_38.877 . exon 373 700 . + . ID=g11256.t1.exon2;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . CDS 373 700 . + 1 ID=cds.g11256.t1;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . exon 866 916 . + . ID=g11256.t1.exon3;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . CDS 866 916 . + 0 ID=cds.g11256.t1;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . exon 1046 1237 . + . ID=g11256.t1.exon4;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . CDS 1046 1237 . + 0 ID=cds.g11256.t1;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . exon 1323 1337 . + . ID=g11256.t1.exon5;Parent=g11256.t1 NODE_4461_length_1587_cov_38.877 . CDS 1323 1337 . + 0 ID=cds.g11256.t1;Parent=g11256.t1 #PROT g11256.t1 g11256 DEVFQLGKHEILESVASFGRITAKEWEELLMSRVWTAVASHVVEDVYLGSARTGDPSDFQTKMDLGLSEWARAELPQMCSRIGREAFIREFAKVLQDKATDVFPDSNEVFGKLKTEVKDKASSLHQWQSDVVDNLSVIQSNVLSDQDITDRKSWENATVFMEKKLGDYAKDMDAKSRAMFGPSTRESWTGWKYPTKDQVSGYAVRSELVAMLSKSKSVVV* # PASA_UPDATE: g2973.t1, single gene model update, valid-1, status:[pasa:asmbl_7799,status:12], valid-1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . gene 116 865 . - . ID=g2973;Name=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . mRNA 116 865 . - . ID=g2973.t1;Parent=g2973;Name=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . five_prime_UTR 858 865 . - . ID=g2973.t1.utr5p1;Parent=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . exon 546 865 . - . ID=g2973.t1.exon1;Parent=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . CDS 546 857 . - 0 ID=cds.g2973.t1;Parent=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . exon 116 258 . - . ID=g2973.t1.exon2;Parent=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . CDS 253 258 . - 0 ID=cds.g2973.t1;Parent=g2973.t1 NODE_5003_length_1087_cov_133.173_potentialcontaminant . three_prime_UTR 116 252 . - . ID=g2973.t1.utr3p1;Parent=g2973.t1 #PROT g2973.t1 g2973 MDESEGIQKRRRLTGDRLALALEAPREINFAVPAAGSGLLERKMELKQERLAKEEKWRENDREIALRRLELDEKRAESDRAGQETMQKMLALIQMMLEKGTAQKL* # ORIGINAL: g961.t1 original gene structure, not modified by PASA NODE_3705_length_2918_cov_27.172 AUGUSTUS gene 205 2231 . + . ID=g961;Name=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS mRNA 205 2231 . + . ID=g961.t1;Parent=g961;Name=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS exon 205 339 . + . ID=g961.t1.exon1;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS CDS 205 339 . + 0 ID=cds.g961.t1;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS exon 676 907 . + . ID=g961.t1.exon2;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS CDS 676 907 . + 0 ID=cds.g961.t1;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS exon 1137 1234 . + . ID=g961.t1.exon3;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS CDS 1137 1234 . + 2 ID=cds.g961.t1;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS exon 1758 1908 . + . ID=g961.t1.exon4;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS CDS 1758 1908 . + 0 ID=cds.g961.t1;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS exon 2158 2231 . + . ID=g961.t1.exon5;Parent=g961.t1 NODE_3705_length_2918_cov_27.172 AUGUSTUS CDS 2158 2231 . + 2 ID=cds.g961.t1;Parent=g961.t1 #PROT g961.t1 g961 MAKKKSAKAPKQSASSEIALMTERRASARLASKPALSLAEIADEVATSKRPEHFAPEAPLPPLGVSITCSSGTEGSSSHSVPPSAFASTAHLLGSGIGSAFGGHKHLCYSIDFASNGKLMAVGGGDGMVSFFPLNRTAKEETEEESDALDEDSDNRRHLLSSSDDGTLVLSRVTWSEDDDYSDVTGQCTASFTPISRLGKEIHKSGIFSMHEVARKVLTAGKVSGAVCT* # ORIGINAL: g550.t1 original gene structure, not modified by PASA NODE_1779_length_9296_cov_44.3753 AUGUSTUS gene 1474 4847 . - . ID=g550;Name=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS mRNA 1474 4847 . - . ID=g550.t1;Parent=g550;Name=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 4422 4847 . - . ID=g550.t1.exon1;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 4422 4847 . - 0 ID=cds.g550.t1;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 3070 4205 . - . ID=g550.t1.exon2;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 3070 4205 . - 0 ID=cds.g550.t1;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 2683 2941 . - . ID=g550.t1.exon3;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 2683 2941 . - 1 ID=cds.g550.t1;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 2267 2546 . - . ID=g550.t1.exon4;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 2267 2546 . - 0 ID=cds.g550.t1;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 1474 1895 . - . ID=g550.t1.exon5;Parent=g550.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 1474 1895 . - 2 ID=cds.g550.t1;Parent=g550.t1 #PROT g550.t1 g550 MARHVADPDVQKAGCKALAHLSRYYQDGCPEGEWEKAVLVAMETHGNNIGVKMAACLFCVWQHRQPSMAGTLDTVLDIILDTLRVCIDDEDVLLLACACLATLSSNDGWDHAAVERGGFDATVVAMRAHPNNAKLQEEACAVNDRSLQLEGCEFILDLADKEFVSSSDRALAMACLTHLLRSASVTRDMRQKACSTILNCKGEGWRQATVDAGALEAIVSFMGRHKPLLSLNMCFPLLEALVTRENVARAHKAGAVSAIVRVLKNCIVDGPMLQKACNALGTMALLMNMETEIDFDSYGAFEAIRNHAEKHPHAQARVWVQHALFYIAGERPASPRDEDKAPIATMNATPLDAQSQIDGCRLLARSAVHLDPSAACDAAATVLAAMREHSNNPDVVSLSFSALVTLAASELVRGSPVGMDALDAVISLMRSHLGHVDTQDNGCRAIRSYARHHDSLKAVIARGGVEAVLAAMSAHATVALVQLSGCWALCCGSSPEYVSAVADKGGIEAVTAALSVHVLDTNRVQLDGCRALVDMVRGGMVAAPVRAGVFDATLSAIKAPPRDTVTLAAMLTVLGAFAQADGSAGMIDFVASGAVDCVICALYRHPEVAKENATTLLRCLSAHDTLSGRDLLRDTYGSDVAALVGELLAGNLPGLSAARLLMGEITPIRLVMKAPVRRRAALVSLAAAPEDVRELWDAISGEMDDSIYIAVGLANSAEESCKVFRECVKYIRINTFDSVLWHFIHDIVCNKAPTEETARASYAARLERAVADATRADSALRNAEAISAARKANDDDNPSRFGAGFEVSTQKSSPTISGRSCARSGLHPLLRAASIKSALF* # ORIGINAL: g552.t1 original gene structure, not modified by PASA NODE_1779_length_9296_cov_44.3753 AUGUSTUS gene 6497 8188 . - . ID=g552;Name=g552.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS mRNA 6497 8188 . - . ID=g552.t1;Parent=g552;Name=g552.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 6497 8188 . - . ID=g552.t1.exon1;Parent=g552.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 6497 8188 . - 0 ID=cds.g552.t1;Parent=g552.t1 #PROT g552.t1 g552 MSVGFNLLSPETVVHHIVPYLSNADVSSLSKVNSMLHAHLRGKRLYHLWPLYVRKYVEEPVFREEVKAAIPVNRIVLEGHVLHPTKDGQAIDRSPKDLSPFAGVHTANIGICSSAADFSPLRGVHTIDLNLCIGDTESSLLPHLVDTVVISAQMLLLSGAPRLSAAQSLLLMNVGGNLQCLEGVPRVDLRFSNVTNLSPLRHAKFVSLDELDVDDISPLENAREIHIVKCPKIMDVSMLRNVRVFVMHDCMFPAIPPELGSLHRLELESTVLRDVSAVRCIHTLILMDCHMIENISSLSNVHHTLDLSVSMDTVCRMPTFDVSCLSRLHTLRLDYRPFTGISQLGDVHTLSVARAKFNDSDLLSLSSVHTLCLADTRVADVSSLGNVHALDLSFCKQLGDLSALSHCYSLNLTCACVRDAAPLGGVHTLVLQDTTVSDVSSLGGVHTLDLCRTACVDVLALGSVRSLDLSRTKVTNVSDLGSVWSLNLAKTPVSDVSMLGSVHVLNLTDCKNVTNVSALGNVHTLHLCGTSITDASLLARVCVLSVDDSLKSDLLKGSVRDLL* # ORIGINAL: g551.t1 original gene structure, not modified by PASA NODE_1779_length_9296_cov_44.3753 AUGUSTUS gene 4916 5158 . - . ID=g551;Name=g551.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS mRNA 4916 5158 . - . ID=g551.t1;Parent=g551;Name=g551.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 4916 5158 . - . ID=g551.t1.exon1;Parent=g551.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 4916 5158 . - 0 ID=cds.g551.t1;Parent=g551.t1 #PROT g551.t1 g551 MCDLNVQMEFSAIGAMRNHPSAADIQEAGCRALVSGGEPSTFVSLRDAIKLIVVASTEHLDNTRVLAAGCEAFEILMELS* # ORIGINAL: g549.t1 original gene structure, not modified by PASA NODE_1779_length_9296_cov_44.3753 AUGUSTUS gene 40 586 . + . ID=g549;Name=g549.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS mRNA 40 586 . + . ID=g549.t1;Parent=g549;Name=g549.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 40 138 . + . ID=g549.t1.exon1;Parent=g549.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 40 138 . + 0 ID=cds.g549.t1;Parent=g549.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS exon 413 586 . + . ID=g549.t1.exon2;Parent=g549.t1 NODE_1779_length_9296_cov_44.3753 AUGUSTUS CDS 413 586 . + 0 ID=cds.g549.t1;Parent=g549.t1 #PROT g549.t1 g549 LHDRLRADPLASTLDVGLVDAAKCFVTNGAAAQTQGPHLAQIRSRLSVRLAPFDAAVDSLLPLLEATSDLSSASLSLLSAVGNPPVERPF* # ORIGINAL: g773.t1 original gene structure, not modified by PASA NODE_4387_length_1686_cov_34.5233 AUGUSTUS gene 20 448 . + . ID=g773;Name=g773.t1 NODE_4387_length_1686_cov_34.5233 AUGUSTUS mRNA 20 448 . + . ID=g773.t1;Parent=g773;Name=g773.t1 NODE_4387_length_1686_cov_34.5233 AUGUSTUS exon 20 448 . + . ID=g773.t1.exon1;Parent=g773.t1 NODE_4387_length_1686_cov_34.5233 AUGUSTUS CDS 20 448 . + 0 ID=cds.g773.t1;Parent=g773.t1 #PROT g773.t1 g773 MEGGGPPPPPPPPGGLPPPPPSVPAAVAAPETGRMSLLESIRQAGGTEKMRLNSIKDRKLEAKKAKKEKQEVESGGDMMSSLMESLNRRRKGISGEKGASAQKKRDDDDDAGGAMDKIAKMIPAPKNRAQSTASGDSTEWDD* # ORIGINAL: g11016.t1 original gene structure, not modified by PASA NODE_2001_length_8159_cov_25.7746 AUGUSTUS gene 2875 3735 . - . ID=g11016;Name=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS mRNA 2875 3735 . - . ID=g11016.t1;Parent=g11016;Name=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 3502 3735 . - . ID=g11016.t1.exon1;Parent=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 3502 3735 . - 0 ID=cds.g11016.t1;Parent=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 3125 3295 . - . ID=g11016.t1.exon2;Parent=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 3125 3295 . - 0 ID=cds.g11016.t1;Parent=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 2875 2970 . - . ID=g11016.t1.exon3;Parent=g11016.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 2875 2970 . - 0 ID=cds.g11016.t1;Parent=g11016.t1 #PROT g11016.t1 g11016 MSFVATGKHAMAGENIISSEHPVGDDVLRAMFASSRTQQSQSSRYEASGDYAVTGINIYQQSKAPTAATAGSEKPVVEDAGCSAVTSTANASSSRAKSLQPAVTVALLGPNIGRTSAQGPPALPPRKDSASGAGQGGDTSEIYVDLTNHVEDMSTSDTIYEELDTP* # PASA_UPDATE: g11015.t1, single gene model update, valid-1, status:[pasa:asmbl_3247,status:12], valid-1 NODE_2001_length_8159_cov_25.7746 . gene 1159 2644 . - . ID=g11015;Name=g11015.t1 NODE_2001_length_8159_cov_25.7746 . mRNA 1159 2644 . - . ID=g11015.t1;Parent=g11015;Name=g11015.t1 NODE_2001_length_8159_cov_25.7746 . exon 2628 2644 . - . ID=g11015.t1.exon1;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . CDS 2628 2644 . - 0 ID=cds.g11015.t1;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . exon 2152 2310 . - . ID=g11015.t1.exon2;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . CDS 2152 2310 . - 1 ID=cds.g11015.t1;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . exon 1878 1987 . - . ID=g11015.t1.exon3;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . CDS 1878 1987 . - 1 ID=cds.g11015.t1;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . exon 1159 1759 . - . ID=g11015.t1.exon4;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . CDS 1413 1759 . - 2 ID=cds.g11015.t1;Parent=g11015.t1 NODE_2001_length_8159_cov_25.7746 . three_prime_UTR 1159 1412 . - . ID=g11015.t1.utr3p1;Parent=g11015.t1 #PROT g11015.t1 g11015 MERSNSTAFESLSVATGLLAFVKELSSSLQEKYRVELIRVPSVTGSRWHMRVKLDPVAWSGRVGTNTHKIGPARLRAGCERVCGFFVVDELHLKNGAGKRLTKFHLVCRREPIRDVLLVPKCHVTNSAMLQDVSVWKAIADFVHDYRPDLSRGHCGELWQVDHFPLVSTAPNGILTNSFVMSARSVSYKSRVGTLSKVELMPADVASAHR* # PASA_UPDATE: g11014.t1, single gene model update, valid-1, status:[pasa:asmbl_3246,status:12], valid-1 NODE_2001_length_8159_cov_25.7746 . gene 1 605 . - . ID=g11014;Name=g11014.t1 NODE_2001_length_8159_cov_25.7746 . mRNA 1 605 . - . ID=g11014.t1;Parent=g11014;Name=g11014.t1 NODE_2001_length_8159_cov_25.7746 . five_prime_UTR 605 605 . - . ID=g11014.t1.utr5p1;Parent=g11014.t1 NODE_2001_length_8159_cov_25.7746 . exon 1 605 . - . ID=g11014.t1.exon1;Parent=g11014.t1 NODE_2001_length_8159_cov_25.7746 . CDS 1 604 . - 0 ID=cds.g11014.t1;Parent=g11014.t1;3_prime_partial=true #PROT g11014.t1 g11014 MPSHGSFRSHGQSLTIADLPRALSFTIPAGHSAAVWTVSDAGALTDVSATPNRRLDEPSVAEILVGVRNNNHSGPAAELAVVPLCVRLYADSGRCTLTKRWTLSSTCAAAGLDLNSVTVGSLRYCDLTVFKEDNSKAAEGGHNRALYVYVRGGIEGLAVVELGANADGCLLSGAVHPGHEIHVVSCASRTAPLLGSRKAEV # ORIGINAL: g11017.t1 original gene structure, not modified by PASA NODE_2001_length_8159_cov_25.7746 AUGUSTUS gene 5648 6355 . + . ID=g11017;Name=g11017.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS mRNA 5648 6355 . + . ID=g11017.t1;Parent=g11017;Name=g11017.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 5648 5689 . + . ID=g11017.t1.exon1;Parent=g11017.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 5648 5689 . + 0 ID=cds.g11017.t1;Parent=g11017.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 5861 6355 . + . ID=g11017.t1.exon2;Parent=g11017.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 5861 6355 . + 0 ID=cds.g11017.t1;Parent=g11017.t1 #PROT g11017.t1 g11017 MKQIDERLPRLDRKTAEANTIDGSASAVAVLEVAATEDPILLNETPADVVLGDGRASALSEVLAPVFPETDSTTDDGSAVSDVSQDVESGECSQANNALTASASQKTAFGSTPWRTEDATDDGDARASLLQFAAAEVGMDFVMDVGDKDSEMSAASDSGMALCDLEAQAVSSVDAMHG* # ORIGINAL: g11018.t1 original gene structure, not modified by PASA NODE_2001_length_8159_cov_25.7746 AUGUSTUS gene 7594 8037 . - . ID=g11018;Name=g11018.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS mRNA 7594 8037 . - . ID=g11018.t1;Parent=g11018;Name=g11018.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS exon 7594 8037 . - . ID=g11018.t1.exon1;Parent=g11018.t1 NODE_2001_length_8159_cov_25.7746 AUGUSTUS CDS 7594 8037 . - 0 ID=cds.g11018.t1;Parent=g11018.t1 #PROT g11018.t1 g11018 MFSYGEIPYAGVANSGILQHVSSGARLERPSACPRELFENVIVLCWSESAEDRPVFDSIAGAISDVMSHAALASERVDVVSPRPNRVERAESTSLNSPNPTQSTKPSKLQKGASYLSMMGGADGIGEVDSAGPSHNPYLDIGGIELH* # ORIGINAL: g160.t1 original gene structure, not modified by PASA NODE_1876_length_8770_cov_39.5247 AUGUSTUS gene 458 6169 . - . ID=g160;Name=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS mRNA 458 6169 . - . ID=g160.t1;Parent=g160;Name=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 5122 6169 . - . ID=g160.t1.exon1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 5122 6169 . - 0 ID=cds.g160.t1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 3816 4810 . - . ID=g160.t1.exon2;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 3816 4810 . - 2 ID=cds.g160.t1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 2958 3470 . - . ID=g160.t1.exon3;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 2958 3470 . - 0 ID=cds.g160.t1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 2390 2551 . - . ID=g160.t1.exon4;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 2390 2551 . - 0 ID=cds.g160.t1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 811 1973 . - . ID=g160.t1.exon5;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 811 1973 . - 0 ID=cds.g160.t1;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS exon 458 551 . - . ID=g160.t1.exon6;Parent=g160.t1 NODE_1876_length_8770_cov_39.5247 AUGUSTUS CDS 458 551 . - 1 ID=cds.g160.t1;Parent=g160.t1 #PROT g160.t1 g160 MLYASVVRRRATCFVRKQPLLACIILVLSAVGTVEADNTCPTSVFDYTWKPSFATGDVDVGVLAPMCSGLVAFMGTQGTVTCVPLSPTSAGFSFQYTVVSDLRAGSNTQSLGVGSVIKGAFRVVSTGVNGLPDAAVFAITLTGSVAALASQLLASGDVGSIASGGTAVRYLHRPDVTTNDATYALVLCGAISAGSRSVARLPPGTYAHPGFALRGQALSIASTGGVGAIKIICEASVVSNENWHFDLTDSNLTVANVAFVNCSRGVAVGRGGSLVSLVSVTGTVTAYTTTSLFSAVGPGTVNIAMDGVRFAMFKNSDQWDPRATLSLYGSFLAARGGAHIVSLVRSSVEGFVSGAAGGAFYADSTTSLHISSTNVSFCASEIGGGIALAGNASLNINDCLFHLSISTIMSRLTQAHAGYGGAITLLGRSTAIVYYCSFTSGSASGGGAGIAVLDSSLLAVDYCEFAGGASRYGGGVLVETDRNETCMITSVLFSNNAAGRGAGIYFGPNVIGKTRGCTFVSGRSVIGGGAVAIEDALLWDSYGDTFIGNNGADGGAVSIVQSAVYLSSAPFTYGTVSVSRGRFLSNAASGTGAGIMMMSVSSLGKITEDIPSPEVVAQRLNTLDATATEGRLPTSLLVSGCNFTDSFSSRGGAVHVSGLTRASIQDSLFTENNAFSGGAAAVEGTAWLVISTSSFVGNGASKGGALSATDRSHLLVVSSRFINCTSKAAGGVCIADTHAITEWTDVYGSDNSANEQGGFISLWNDASAIFRGSHFDGHFVGEAGGFAYCGTNAVLRLENVDIRYSCAGLTGGTFRLVSDSSVTGIHVTIYASGAVTGGWMHLRDSSKANFVDLNVDSAIAESHGGGVYQDAATELTIVDSVFANGRTSIGNGGFLFLAGRGKALFRNCTVSNMYAIDGGFAHVDASTGIGTIGTCIVILHDFNTAELLLQGAARPTLTVDGVVATNGRASRGAFIRSNGGAVTVSGSTVSNCIAQESGGAMYISPELTVSLPSRIYSNISVINSTFADCSAAVLGGAMYLGPRATEFANSTFFSNVDIRRSSAQGGGGGIYVDAAIPDLSSVHFVGNGGPFGGDRATPTNRLSISPEFPTGMTVHSGTALPRFVVTAFDHFNQVAYIPVGYADITVTLLLVSTGGRFVDASSVGVRLLGAESKAFENGSVVFDNVQVRGTYAGTYTLLLTAASLRKNITQQIELGSCAGRVEKLYSGDIICPDEYVAPSSGLSSGVLAVAIVIPTVAGVAGIGCFLFFVWLKARQKRISKETHDRFLQKNVAHRTDLKDLEVPRDLLEVREKVGEGEFGIVSKGR # ORIGINAL: g4382.t1 original gene structure, not modified by PASA NODE_4779_length_1251_cov_30.369 AUGUSTUS gene 2 1251 . + . ID=g4382;Name=g4382.t1 NODE_4779_length_1251_cov_30.369 AUGUSTUS mRNA 2 1251 . + . ID=g4382.t1;Parent=g4382;Name=g4382.t1 NODE_4779_length_1251_cov_30.369 AUGUSTUS exon 2 1251 . + . ID=g4382.t1.exon1;Parent=g4382.t1 NODE_4779_length_1251_cov_30.369 AUGUSTUS CDS 2 1251 . + 0 ID=cds.g4382.t1;Parent=g4382.t1 #PROT g4382.t1 g4382 ARGKREDQPASESDKERGLVNGLPATELRYPLKQLLSSARRETASVRAGWIEVKVRNRGTVRTRISVPPKHDARVSWRGGGVCSLNPPECTSRGIHFWIFQVSHPSAGHSAAHARLDLSDAIMDGKAFAQAVVCRNMDAYQCWAASTIVIELPETLPSVEEEGKVDKVTWGVGYARRFIQLVAETHDLDHIFMLDDNIEHMAEIVLPPQRRVRDDGSVSRVLVTQPCSLWTVLKRMQSQMEGDVLDDGLDLDQLLVDRGIPADPRTRNANKAMWRHAGHPGTYAILGTARYTNRAITESPFTQRHIFSFALVNVKAMKEKSQWTNESLLYPPWPFREDLTLNDACFFAGLRLCKYNRFIQVKRPSRFRASVNKGKGAQSAFEVIAWPNDANCTAIVGIDGKSTLRQELAALIQFVN # PASA_UPDATE: g311.t1, single gene model update, valid-1, status:[pasa:asmbl_2238,status:3], valid-1 NODE_1650_length_10002_cov_53.9998 . gene 3102 6688 . - . ID=g311;Name=g311.t1 NODE_1650_length_10002_cov_53.9998 . mRNA 3102 6688 . - . ID=g311.t1;Parent=g311;Name=g311.t1 NODE_1650_length_10002_cov_53.9998 . five_prime_UTR 6583 6688 . - . ID=g311.t1.utr5p1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 6570 6688 . - . ID=g311.t1.exon1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 6570 6582 . - 0 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 6199 6327 . - . ID=g311.t1.exon2;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 6199 6327 . - 2 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 5574 5920 . - . ID=g311.t1.exon3;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 5574 5920 . - 2 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 5334 5447 . - . ID=g311.t1.exon4;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 5334 5447 . - 0 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 4938 4995 . - . ID=g311.t1.exon5;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 4938 4995 . - 0 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 4212 4556 . - . ID=g311.t1.exon6;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 4212 4556 . - 2 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 3811 4040 . - . ID=g311.t1.exon7;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 3811 4040 . - 2 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . exon 3102 3624 . - . ID=g311.t1.exon8;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . CDS 3511 3624 . - 0 ID=cds.g311.t1;Parent=g311.t1 NODE_1650_length_10002_cov_53.9998 . three_prime_UTR 3102 3510 . - . ID=g311.t1.utr3p1;Parent=g311.t1 #PROT g311.t1 g311 MADGAASPKGGKKGKKVKMSLNEFNAAFDSNKKTSWADDSPIELPTGPAAHEPYQPRAADAIGGAFASDSRYGGDRSYGNDRYGDRGNDRGGDRNDRGGDRGYGDRGNRGGYGDRDGGDRPSRPTGPAGEARIPSQPPYTAFVGNLSWEATEDDLARFFDGLKISSIRLVEDRETGKKRGFGYVEFQDANSLKGAVDLTGRPFMNRDIKIDVSESKNTGGGGFGQRSGGFSGGFSGGDAGGDDRTAGSWRTEGAGPLPPRERPSGDRYGGGDRGSSGFGGRGGDRGGDRPSYGDRGDRGDRPSYGDRGGDRYGDREGGRGGYDRPPRDGGYEQRDGPAGARPKLNLQPRTAPVERAAPAAPAAAAAEKTADAPKPSAPKSNPFGSARPVDTSSKERAIEDRLRQERDAAAAEAKKAREAREAREGKPAADGPRERKDSDTSSQGKKDRK* # ORIGINAL: g312.t1 original gene structure, not modified by PASA NODE_1650_length_10002_cov_53.9998 AUGUSTUS gene 7533 9902 . + . ID=g312;Name=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS mRNA 7533 9902 . + . ID=g312.t1;Parent=g312;Name=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 7533 7676 . + . ID=g312.t1.exon1;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 7533 7676 . + 0 ID=cds.g312.t1;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 7835 7970 . + . ID=g312.t1.exon2;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 7835 7970 . + 0 ID=cds.g312.t1;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 8159 9369 . + . ID=g312.t1.exon3;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 8159 9369 . + 2 ID=cds.g312.t1;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 9672 9902 . + . ID=g312.t1.exon4;Parent=g312.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 9672 9902 . + 0 ID=cds.g312.t1;Parent=g312.t1 #PROT g312.t1 g312 MARLHVLALLAATVAVIVCGVNANEDGELLGCGGFLKSEVPIDFSIVEVKLYSLEGTLKYSTEAAPNNGYYYLPVYERGRYHLAVEPPRGWSFDPARVEVSVGAPGDRCTLGQDINFVFTGYSIIGSVVASGQSAGPAGVDVTLSGATGTRQTVKTGNGGSFSFSKLFPGTYRVTASHPTWKFSRSTTEATISSDNALISDALAVSGFDVTGAVTSEGEPVREVEFFLYPLSSSQQQPECARPQTPTAKRGGVDAACVAVSDAFGRFEFHGVSSGKYALVPRYTGGLQQQQQQGGASSDASFDIVPAEAEISVNLGSMHLDTPFVVSGFSVSGRVVDAQGSGLALVEVRVDGELRDTTDSSGGYRINGMRTGSKTIALKKEGYRFAAVIARVSPSNAVLPTAQPSAHVVCGSIATNNVQQQAHRRVSIAPESAASGLSEVTATTDDSGSFCAEVAPGTYVVQPHVTASEKKDGFVLSPAKKIVNAAKGPVGDVKFSQALVRVAGRVRCMDRQACEGTVTTITLAGDRSKETVTAVFSAEREYGTFSFGNVLPGHYKVSIHQGTLCWKERNFELE # ORIGINAL: g310.t1 original gene structure, not modified by PASA NODE_1650_length_10002_cov_53.9998 AUGUSTUS gene 597 2056 . + . ID=g310;Name=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS mRNA 597 2056 . + . ID=g310.t1;Parent=g310;Name=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 597 1175 . + . ID=g310.t1.exon1;Parent=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 597 1175 . + 0 ID=cds.g310.t1;Parent=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 1447 1595 . + . ID=g310.t1.exon2;Parent=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 1447 1595 . + 0 ID=cds.g310.t1;Parent=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS exon 1957 2056 . + . ID=g310.t1.exon3;Parent=g310.t1 NODE_1650_length_10002_cov_53.9998 AUGUSTUS CDS 1957 2056 . + 1 ID=cds.g310.t1;Parent=g310.t1 #PROT g310.t1 g310 MMVMDRIRELERSLAELHKERAAQIEAAKQQQQQQQQQQQQQQQQQQQQQQPNGGEPLQQMDGAFTPTLPSSPGKPSGQPLALSHVAPPHSPSGATLARQSTVQQDHSEPTQQQPQQQQSQQQRPNGAASAVPSGLTQLSTQRPASPVVSSIATSAASSHGGSLSNSFSNGDQYHHAPDAAMASMKLKLEDYQAKLRAERHQRNEFKRQLKAALMKQHEEQRHRMEELDLALRRTAAERDQYRSLYENLVTELDKAKRSHTARIEQQSSLSDGLK* # PASA_UPDATE: g3945.t1, single gene model update, valid-1, status:[pasa:asmbl_9265,status:12], valid-1 NODE_766_length_17955_cov_42.303 . gene 13168 17618 . + . ID=g3945;Name=g3945.t1 NODE_766_length_17955_cov_42.303 . mRNA 13168 17618 . + . ID=g3945.t1;Parent=g3945;Name=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 13168 13251 . + . ID=g3945.t1.exon1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 13168 13251 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 13378 13433 . + . ID=g3945.t1.exon2;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 13378 13433 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 13537 13646 . + . ID=g3945.t1.exon3;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 13537 13646 . + 1 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 13747 13871 . + . ID=g3945.t1.exon4;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 13747 13871 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 14219 14316 . + . ID=g3945.t1.exon5;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 14219 14316 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 14556 14719 . + . ID=g3945.t1.exon6;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 14556 14719 . + 1 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 14809 15030 . + . ID=g3945.t1.exon7;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 14809 15030 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 15144 15231 . + . ID=g3945.t1.exon8;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 15144 15231 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 15393 15487 . + . ID=g3945.t1.exon9;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 15393 15487 . + 1 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 15672 15866 . + . ID=g3945.t1.exon10;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 15672 15866 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 15965 16069 . + . ID=g3945.t1.exon11;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 15965 16069 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 16181 16293 . + . ID=g3945.t1.exon12;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 16181 16293 . + 2 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 16441 16611 . + . ID=g3945.t1.exon13;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 16441 16611 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 16765 17166 . + . ID=g3945.t1.exon14;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 16765 17166 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . exon 17361 17618 . + . ID=g3945.t1.exon15;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . CDS 17361 17480 . + 0 ID=cds.g3945.t1;Parent=g3945.t1 NODE_766_length_17955_cov_42.303 . three_prime_UTR 17481 17618 . + . ID=g3945.t1.utr3p1;Parent=g3945.t1 #PROT g3945.t1 g3945 MYARRLAAGLAAAGLSAVAVKSSGVFGSPALADADNSVYAEIPLLTRAEQLKNLKGSAKEPFDVLVIGGGATGAGVALDAATRGLRTALVDRDDFSSGTSSRSTKLIHGGVRYLQKAIMNFDYEQYLMVKEALHERSNLLGIAPHLSYPLPIMLPVYKWWQLPYFWVGIKMYDFVAGSKNVKSSYVLGKSKALEAFPMLKQDDLVGAIVYYDGQHNDARMNLTIAITAAVEGATIANHCEVTRLLKRKDESTGKEVVAGATVRDVMTGETWDVHAKSVINATGPFTDAIRRMDDASAPKMVQPSAGVHIVLPDYYSPRGMGLLDPATSDGRVIFFLPWQNTTIAGTTDSPTEVTALPRPREEEIHFILEEIRHYLNPDVQVRRGDVLAAWSGIRPLVSDPNSKDTQSIVRNHIVHVSASNLVTIAGGKWTTYRSMAVEAVDAAVKAAGLKPLRPSQTDGKLLLGGAGWSPTLFIRLVQDFGIDVDVAQHLSETYGTRAFEVAKLAQITGKRWPVVGNRLIAEYPYIEAEVVYAIKEYACTAVDVLARRTRLAFINVQAAEEALPRIVKIMAQHLRWDKRRQEAEIAEAKEFLLTMGTEAREKVRVVPINFTEEETRRYRRAFSAFDLKGNGHISALELRAVLDSIGEEVSEDHLRDLIAEVDINKNSTIELDEFLQLMSALKTGAVANNRLATIIEKHAKYLERGISVDRSGGGV* # PASA_UPDATE: novel_model_24_5b6be656, single gene model update, valid-1, status:[pasa:asmbl_9267,status:3], valid-1 NODE_766_length_17955_cov_42.303 . gene 7132 7804 . - . ID=novel_gene_24_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_766_length_17955_cov_42.303 . mRNA 7132 7804 . - . ID=novel_model_24_5b6be656;Parent=novel_gene_24_5b6be656;Name=%2A%2A%20NO%20NAME%20ASSIGNED%20%2A%2A NODE_766_length_17955_cov_42.303 . five_prime_UTR 7767 7804 . - . ID=novel_model_24_5b6be656.utr5p1;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . exon 7559 7804 . - . ID=novel_model_24_5b6be656.exon1;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . CDS 7559 7766 . - 0 ID=cds.novel_model_24_5b6be656;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . exon 7337 7436 . - . ID=novel_model_24_5b6be656.exon2;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . CDS 7337 7436 . - 2 ID=cds.novel_model_24_5b6be656;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . exon 7132 7212 . - . ID=novel_model_24_5b6be656.exon3;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . CDS 7164 7212 . - 1 ID=cds.novel_model_24_5b6be656;Parent=novel_model_24_5b6be656 NODE_766_length_17955_cov_42.303 . three_prime_UTR 7132 7163 . - . ID=novel_model_24_5b6be656.utr3p1;Parent=novel_model_24_5b6be656 #PROT novel_model_24_5b6be656 novel_gene_24_5b6be656 MQFMRRKWTIRFILCFAHKTDPGLKLLLRSSEESIIILAQICFCFWDDVCVGLSVQHSKMAKSKNHTNQNQNKKAHRNGIKRPQSNKYPSLRGVDPKFLKNLRYARKGNKRTAAPVKE* # PASA_UPDATE: g3941.t1, single gene model update, valid-1, status:[pasa:asmbl_9261,status:12],[pasa:asmbl_9262,status:12], valid-1 NODE_766_length_17955_cov_42.303 . gene 108 5155 . + . ID=g3941;Name=g3941.t1 NODE_766_length_17955_cov_42.303 . mRNA 108 5155 . + . ID=g3941.t1;Parent=g3941;Name=g3941.t1 NODE_766_length_17955_cov_42.303 . five_prime_UTR 108 108 . + . ID=g3941.t1.utr5p1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 108 247 . + . ID=g3941.t1.exon1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 109 247 . + 0 ID=cds.g3941.t1;Parent=g3941.t1;5_prime_partial=true NODE_766_length_17955_cov_42.303 . exon 514 917 . + . ID=g3941.t1.exon2;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 514 917 . + 2 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 1159 2013 . + . ID=g3941.t1.exon3;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 1159 2013 . + 0 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 2191 3477 . + . ID=g3941.t1.exon4;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 2191 3477 . + 0 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 3644 4045 . + . ID=g3941.t1.exon5;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 3644 4045 . + 0 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 4135 4369 . + . ID=g3941.t1.exon6;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 4135 4369 . + 0 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 4485 4572 . + . ID=g3941.t1.exon7;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 4485 4572 . + 2 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 4734 4925 . + . ID=g3941.t1.exon8;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 4734 4925 . + 1 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . exon 5078 5155 . + . ID=g3941.t1.exon9;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . CDS 5078 5096 . + 1 ID=cds.g3941.t1;Parent=g3941.t1 NODE_766_length_17955_cov_42.303 . three_prime_UTR 5097 5155 . + . ID=g3941.t1.utr3p1;Parent=g3941.t1 #PROT g3941.t1 g3941 VTAQLNTLLNENGNMRWQPVPDGVCTAIVSADKDNGTTTFRLYGVHASGALLLEVDLVRKAAIKRVSECFVMGRDIAAGSHWGLNFLNQAAADKIILAFELATDPSRDAEETKSALRVAPAPAAQQPTAQFGAVGVSAEQLGIPSALQQTSQRIGAASPLRENMHVRTASTSSRGESQETEQQVRSGSGSAGTPASMNDDDMSSVAVKSGWLELKKNLSQKNQKLEFGKWATTFKKYWAVLRGPMLSLYRAEDRERDPSALEAALPKHAFSIDRAIAVIDGEAKRDFVFHLSSSDGDTHFLAALSQLDAEDWVRRIHVAAAMAMARFNDRSRAVELLTSRIEEHTALMDSEAKRGKMNDFQVSFYMDEKAKEAINKRVKESEAMMESLALDVYRARYLLSALRQSEPPSAQALMAHVSKQTRQVLGKPSGPLSPVLVHAIVSMRTPARAKPLLERKNSNVVISAAEDSDSNPESEPSEPRAKAQGKANKKLGMETFFLRVKLPDDQKTAIEASPDMKVLEVLETVAAKRKFDACDYFVIVAQKGGKSLEPPLTAAIGAFGTQEIEVCKKVYRRVQVLKSEEPMFGLVIRSGDGGRGIVVARMVLGEAAEQTGLLFAGDEILEINGVNVLTLGVEAVSKLLRDNRRVVFLVRSKQGEEKDNVSDAHTTGDGDKGVGSAGGDIIQALMCRPPPSRTAPIMDADAKRLTIPPPPALPSAAPLLSHAKAKHLSAHVAHCRTASTDSGAPAATAASPVTTAPPTTADADAIVEALLKTVAQLTLQLRNAAASVAVKPPTGGMTKEQMRDNVIGEMMNTERSYVRDLGVLVERFMEPLKQEGCVSESDIPSLFSNIAAIRDFQAKFLVDLEAACAPPAPPKDSGDGGDSDQPAVTSPPTSKDDLPFRIGAAIIAHSESFRLYADYCANHPDALTTLHKHEGNARLRSFLDARNPNREQSMTLESFLIKPVQRLLKYPLLLREMIRYTPEDTPTHKQLNEALAGITAVAGTINEVKRQRDNAERAKELFETVEAWEGPAFDTVGDLLYFGELTKLDTNDSANKMKKLECFLFAKLLVFARNKNAGKKPPGKPVYAYTGSIPIGSILVRDKYDSDDVKSGFEVVDMRAANKGGKAAPVTYLCLARNAEEKIKWISLIKQVVKQSILNKAPAIEEPSQAGGPHENIEDANITGIKASKRWGSTSDLARPGSQVTR* # PASA_UPDATE: g3943.t1, single gene model update, valid-1, status:[pasa:asmbl_9264,status:3], valid-1 NODE_766_length_17955_cov_42.303 . gene 8350 9877 . + . ID=g3943;Name=g3943.t1 NODE_766_length_17955_cov_42.303 . mRNA 8350 9877 . + . ID=g3943.t1;Parent=g3943;Name=g3943.t1 NODE_766_length_17955_cov_42.303 . five_prime_UTR 8350 8405 . + . ID=g3943.t1.utr5p1;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . exon 8350 8457 . + . ID=g3943.t1.exon1;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . CDS 8406 8457 . + 0 ID=cds.g3943.t1;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . exon 8566 9559 . + . ID=g3943.t1.exon2;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . CDS 8566 9559 . + 2 ID=cds.g3943.t1;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . exon 9678 9877 . + . ID=g3943.t1.exon3;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . CDS 9678 9780 . + 1 ID=cds.g3943.t1;Parent=g3943.t1 NODE_766_length_17955_cov_42.303 . three_prime_UTR 9781 9877 . + . ID=g3943.t1.utr3p1;Parent=g3943.t1 #PROT g3943.t1 g3943 MAQTFLFSSESVGEGHPDKICDQVSDAILDACIREDPSSRVACETAAKTGMIMVLGEITTKAVLDYQKIIRGVIKKIGYDSSDKGFDYKTCNVLVAIEQQSPDIAQGVHVNRAVEDIGAGDQGIMFGYATDETPELMPLTLMLSHQLNAKLAENRRNGTMGYLRPDTKTQVTVEYHLENGALTPLRVHTVVISTQHAEEVTNEQLRSDLLEKVIKEVIPAKYLDDRTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVAAGLARRALVQVAYAIGVAKPLSLYVETYGTGRKSQEELLKIINDNFDLRPGVIVRDLGLNQPIYQDTACYGHFGRSQFPWEQPKPLKF* # ORIGINAL: g3944.t1 original gene structure, not modified by PASA NODE_766_length_17955_cov_42.303 AUGUSTUS gene 9916 12740 . - . ID=g3944;Name=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS mRNA 9916 12740 . - . ID=g3944.t1;Parent=g3944;Name=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 12660 12740 . - . ID=g3944.t1.exon1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 12660 12740 . - 0 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 12400 12511 . - . ID=g3944.t1.exon2;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 12400 12511 . - 0 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 12212 12298 . - . ID=g3944.t1.exon3;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 12212 12298 . - 2 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 11302 12125 . - . ID=g3944.t1.exon4;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 11302 12125 . - 2 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 11049 11200 . - . ID=g3944.t1.exon5;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 11049 11200 . - 0 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 10596 10867 . - . ID=g3944.t1.exon6;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 10596 10867 . - 1 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 10274 10489 . - . ID=g3944.t1.exon7;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 10274 10489 . - 2 ID=cds.g3944.t1;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS exon 9916 10181 . - . ID=g3944.t1.exon8;Parent=g3944.t1 NODE_766_length_17955_cov_42.303 AUGUSTUS CDS 9916 10181 . - 2 ID=cds.g3944.t1;Parent=g3944.t1 #PROT g3944.t1 g3944 MSSAGHENAALDGCISIFKDARTDEARFASLLLLTRVLPADDRAALDKVYAAVGLDFISRLLVTDDVPEGCGPMAFKEVGLAVLSALVEAPAAVCDPQLAAILPAVMAILSDAGVTESIIRTCILIMGSILNAHIVPPLSSPSPKGLCDAITQWPAVSTEASACLAHVLANADASWLQMHSVDVEGALLQLSQLFASSSGADKFQYADCIAAAVGNVTAAMPPLAAPDAPWVPIACAAYADALRNRLGREHSAALLRLCASMCGTMGAGWIAGSRAHAISSGAPSAPFGEKLLLLAVHMACVEVRMALEDRDAAVAARESTAVLASAFVILESAVEWLVEQQDLSSVGFQMHAVLREAYSAILSFAQEACQLPSSPGVDLVVRASIRALSAWLSEETEALRDDACAALEDIVRWCSRKGNDGSLALLLPALVNLTAEARGCNGFVAGGGIIALARQASACLAQIACQSTGSHTLVLVCEVILNLLAHNVEFDSALDGLAGELAVLLLRGDVPGSVDSFGESKIIAACICIARASDFEPLADATEAVFVFAVQRASTALKSVGGDDSLWFETVESCWVPVLGALSEAAEQLPNVATAAYGEGLVSAVAALAITGHCASASGQVTWTPSLVDALRGCFDRIARAVVKHGSLSDDSMRQLMATAEEVERRLK* # PASA_UPDATE: g3942.t1, single gene model update, valid-1, status:[pasa:asmbl_9263,status:12], valid-1 NODE_766_length_17955_cov_42.303 . gene 5523 6902 . + . ID=g3942;Name=g3942.t1 NODE_766_length_17955_cov_42.303 . mRNA 5523 6902 . + . ID=g3942.t1;Parent=g3942;Name=g3942.t1 NODE_766_length_17955_cov_42.303 . exon 5523 6117 . + . ID=g3942.t1.exon1;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . CDS 5523 6117 . + 0 ID=cds.g3942.t1;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . exon 6301 6389 . + . ID=g3942.t1.exon2;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . CDS 6301 6389 . + 2 ID=cds.g3942.t1;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . exon 6509 6571 . + . ID=g3942.t1.exon3;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . CDS 6509 6571 . + 0 ID=cds.g3942.t1;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . exon 6743 6902 . + . ID=g3942.t1.exon4;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . CDS 6743 6838 . + 0 ID=cds.g3942.t1;Parent=g3942.t1 NODE_766_length_17955_cov_42.303 . three_prime_UTR 6839 6902 . + . ID=g3942.t1.utr3p1;Parent=g3942.t1 #PROT g3942.t1 g3942 MVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVTDVFAMPQSGTGVSVEAVDPVFQTKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEQLNPRSVAVVVDPIQSVKGKVVIDAFRLINPQMLIMGQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIAINYRKNELEQKMLLNLHKKNWTDGLALEDYKSHSDTNEKTVKDMLTLSKSYVKAVEDEDKLTPEQLAVKNVGKQDPKRHLEEHVSLLMNRNIAQCTCAMIDSEVF* # ORIGINAL: g2805.t1 original gene structure, not modified by PASA NODE_5696_length_749_cov_44.7923_potentialcontaminant AUGUSTUS gene 378 749 . - . ID=g2805;Name=g2805.t1 NODE_5696_length_749_cov_44.7923_potentialcontaminant AUGUSTUS mRNA 378 749 . - . ID=g2805.t1;Parent=g2805;Name=g2805.t1 NODE_5696_length_749_cov_44.7923_potentialcontaminant AUGUSTUS exon 378 749 . - . ID=g2805.t1.exon1;Parent=g2805.t1 NODE_5696_length_749_cov_44.7923_potentialcontaminant AUGUSTUS CDS 378 749 . - 0 ID=cds.g2805.t1;Parent=g2805.t1 #PROT g2805.t1 g2805 INATVVRQSGSSSPVSVVVALIFTRSARSASNEIVLASQNITWNDGETGEKPVMLSSQQLIDMIASGEISTGKLSVALRTASQGQNGGSATSADVSNIANDITVEFVDDVRKSSGGLNMVHYK* # ORIGINAL: g6124.t1 original gene structure, not modified by PASA NODE_2499_length_6058_cov_36.7717 AUGUSTUS gene 2 4146 . + . ID=g6124;Name=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS mRNA 2 4146 . + . ID=g6124.t1;Parent=g6124;Name=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 2 441 . + . ID=g6124.t1.exon1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 2 441 . + 2 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 661 723 . + . ID=g6124.t1.exon2;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 661 723 . + 0 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 926 1034 . + . ID=g6124.t1.exon3;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 926 1034 . + 0 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 1622 1720 . + . ID=g6124.t1.exon4;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 1622 1720 . + 2 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 1823 2073 . + . ID=g6124.t1.exon5;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 1823 2073 . + 2 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 2333 2387 . + . ID=g6124.t1.exon6;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 2333 2387 . + 0 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 2637 2706 . + . ID=g6124.t1.exon7;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 2637 2706 . + 2 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 3047 3129 . + . ID=g6124.t1.exon8;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 3047 3129 . + 1 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 3410 3804 . + . ID=g6124.t1.exon9;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 3410 3804 . + 2 ID=cds.g6124.t1;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS exon 4009 4146 . + . ID=g6124.t1.exon10;Parent=g6124.t1 NODE_2499_length_6058_cov_36.7717 AUGUSTUS CDS 4009 4146 . + 0 ID=cds.g6124.t1;Parent=g6124.t1 #PROT g6124.t1 g6124 QSSDARPLPDAEDEGGLNPFTEAQFLLGHTDIVRILVAIDESRFASGSDDGTAIIWSCVTGRRLHVLHGHSLPVTSMLVIGAGGRGRTVSGQATLPQPSTQPSTQQQGTPGATTSPLASGSALSAAAVANVTESVLVTAGSDKCICLWNVDRGECLRVLTEHAGSVKRLCLVREGMFCSGGKDLCLWTSRGTLVSKCSPPGDDSVYSAVRSLDAGLAFHKTLSAHRESVRTLANVSDSLFASGSIDGTIVLWSTSALVPVSTIPAPGAGAMPRARQSLSTPAGTTLASGAVAAPQPQQQQQPQQPKVYASAIQYIMVHAQRYLFAAIGANFAVYDVVLRDWVMRSAQAHRHQVLGMALALNGTRLVTCSADWTLRLWGPEGSADYSRTADPFAFGFPPQAPPSSSALPFATTLPSARDGSPAPPPDAWLPTALPIPGSVRPFVGPHPSTFQSAENSLSQAAGNAAPNNAPLNPATTAGGGPARPVCHGELLAHADVVNAVLPVGDGSFASCGSDGVVVLWKDGLAEARKRAELVRMIHGLIAASTRPMEPGAASHAAHIGSSAAKP* # PASA_UPDATE: g6125.t1, single gene model update, valid-1, status:[pasa:asmbl_4439,status:12], valid-1 NODE_2499_length_6058_cov_36.7717 . gene 4918 5654 . + . ID=g6125;Name=g6125.t1 NODE_2499_length_6058_cov_36.7717 . mRNA 4918 5654 . + . ID=g6125.t1;Parent=g6125;Name=g6125.t1 NODE_2499_length_6058_cov_36.7717 . five_prime_UTR 4918 5007 . + . ID=g6125.t1.utr5p1;Parent=g6125.t1 NODE_2499_length_6058_cov_36.7717 . exon 4918 5080 . + . ID=g6125.t1.exon1;Parent=g6125.t1 NODE_2499_length_6058_cov_36.7717 . CDS 5008 5080 . + 0 ID=cds.g6125.t1;Parent=g6125.t1 NODE_2499_length_6058_cov_36.7717 . exon 5317 5654 . + . ID=g6125.t1.exon2;Parent=g6125.t1 NODE_2499_length_6058_cov_36.7717 . CDS 5317 5522 . + 2 ID=cds.g6125.t1;Parent=g6125.t1 NODE_2499_length_6058_cov_36.7717 . three_prime_UTR 5523 5654 . + . ID=g6125.t1.utr3p1;Parent=g6125.t1 #PROT g6125.t1 g6125 MKHLIIVAFVVLIAMATGPQGADAGPAAFLASYGICQTGCNGLYVACMTAAGVVAGTVTAGAALPAACVGCSVAQGACMASCATITILAPAP* # ORIGINAL: g4994.t1 original gene structure, not modified by PASA NODE_1436_length_11292_cov_39.4934 AUGUSTUS gene 4846 9811 . - . ID=g4994;Name=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS mRNA 4846 9811 . - . ID=g4994.t1;Parent=g4994;Name=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS exon 9680 9811 . - . ID=g4994.t1.exon1;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS CDS 9680 9811 . - 0 ID=cds.g4994.t1;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS exon 9239 9495 . - . ID=g4994.t1.exon2;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS CDS 9239 9495 . - 0 ID=cds.g4994.t1;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS exon 7243 9073 . - . ID=g4994.t1.exon3;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS CDS 7243 9073 . - 1 ID=cds.g4994.t1;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS exon 5968 6864 . - . ID=g4994.t1.exon4;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS CDS 5968 6864 . - 0 ID=cds.g4994.t1;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS exon 4846 5475 . - . ID=g4994.t1.exon5;Parent=g4994.t1 NODE_1436_length_11292_cov_39.4934 AUGUSTUS CDS 4846 5475 . - 0 ID=cds.g4994.t1;Parent=g4994.t1 #PROT g4994.t1 g4994 MSLRLPKSFRRKAGSVRHVATRPQSLTLTTYDGLSSLLFKDERMHLLCVLRAASDSYNVDHVANTLVSLATRLGEIEPFLRRAVRVEVETATTPSHILGENSLVSKMLCVYALQIGAPYLRAALTDVLNEVMNHAGSLEVLAARMTDPTESAEENSAALASLCALCIDRLRKAARPRELSSLLAVVRDGVSAVYPSLGDAAVFAFFMRRLVCPVVVMPTTAGIMSKLPRRALHRKLGLLAKTLHSFASSMLAVAITRAATQRRASAPAPDANVFPSSGAQGLRRASTGSTDSGRVGDRLDSDWPSATSVPSTSSAASSSSAPSASARKASGLLNVAVLNEAWQTRIVESMASECPDIRTFAREFTNLASDGRQDNTAAIDHGAGVTATPSGSESEAANPSGDTLPTPVVGLVVDDTPVTADDGQSAGTDHTLEPAHTPPHTQTQTQTQTRAQVHVVASTHSPTPAFASVFSPSTSTASLAHVEALSPAHQLHVAAPHAHTDLVTRGLADLHLFLVRNEQRIQTAISTGKVCLCESIGASGGGATAGVDAAVASETSSKGGVGVGLGREGRRRNSHSTDSMDNAKALSSVPENPSDNPPVATPARAAVYSTNPTVVSQHYAHIQAVVEAIVSAMGPPVRESSIRRHEGRGTVGASGATGSLIGAHGCLNSLLAWQDTVRNPTVVSLELLRRFRSVLDVHCAEDGGVDWDGLGSSFDLLEIAMDACELRGLNLKDGFANTNESVAFWVNTHNLLVLHAMSVLGSAASRAQREDLTRWLCYDIGGMYFTLNDIRHGILRGNPDNVIPKDDPRSHLVMLSYDCRVNFAVTRLSAAECPIFVFEAVGLGKQLDNVSRIYFSRNVFINPERRRIVMPKLLKKYHRDFGRYPTDVFRWVVSFLPKVVCRQLWEMNCQGRREIEYVARKHEHVRKDPIFADFNEKRYDTETDLYFRPELVAQSLARWPDAARSVVLGDNAADPNDFTLEVGVLNQDMKWMKEGRPEVAERLLRHCVELCQMFAFDWPAVAASPEFAAFRHDLCELQMVWLERLANDEACAFWTNVHNLLVLHMTIMFGPASKMSLVGRRSAFYSNKYCISGLDYSCDDIFYGIFFANRLGKIFKRKDPRRARMIESADPRCMIGLTHFTVSSPSLVVFTAVGYRNEIDIAAKKYLADKASFNAEKRRLDLPAPVQHVSRFFRGKVEFLQWIAGEMMYINNALGRAVDQYGKKVRVVYQDMDWTAAPAWVMPPVIFV* # PASA_UPDATE: g4993.t1, single gene model update, valid-1, status:[pasa:asmbl_1579,status:12], valid-1 NODE_1436_length_11292_cov_39.4934 . gene 110 4104 . + . ID=g4993;Name=g4993.t1 NODE_1436_length_11292_cov_39.4934 . mRNA 110 4104 . + . ID=g4993.t1;Parent=g4993;Name=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 110 253 . + . ID=g4993.t1.exon1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 110 253 . + 0 ID=cds.g4993.t1;Parent=g4993.t1;5_prime_partial=true NODE_1436_length_11292_cov_39.4934 . exon 333 428 . + . ID=g4993.t1.exon2;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 333 428 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 913 990 . + . ID=g4993.t1.exon3;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 913 990 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 1421 1597 . + . ID=g4993.t1.exon4;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 1421 1597 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 2005 2118 . + . ID=g4993.t1.exon5;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 2005 2118 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 2431 2490 . + . ID=g4993.t1.exon6;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 2431 2490 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 2837 2962 . + . ID=g4993.t1.exon7;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 2837 2962 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 3231 3319 . + . ID=g4993.t1.exon8;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 3231 3319 . + 0 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . exon 3686 4104 . + . ID=g4993.t1.exon9;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . CDS 3686 3857 . + 1 ID=cds.g4993.t1;Parent=g4993.t1 NODE_1436_length_11292_cov_39.4934 . three_prime_UTR 3858 4104 . + . ID=g4993.t1.utr3p1;Parent=g4993.t1 #PROT g4993.t1 g4993 AQLSTTAAIATMQFSLVITSSDGLDTIASGIWSHQLQLSKISGISIDRFHSYDFASPTLVTTRILPSYCDPTNHSNHSAPVHVLGRPRAVVVLCAGVIGGRYKAHSFDKPVMVMGIDICHERKTSNSSSTGALVASVDGEMACYTCRTFEVPPRSEAIPFTTIKTAFVGVLRDYQAKNNHLPERLVVYRDSFGNFYELGVKNEVLALSEAYTEVNGAVLPGLEICYMCVAKRIHTRFFTGGRGPGFYNPPAGTVVDTTIVSDTLVDFYLVSAVRPQGTASAAHYVVAYRSPNFDWTVDDLQNLSFRLAHNYSNWPGAVGTPAPLLYAHKAAYKMAEVIDGPAANALSMYYV* # ORIGINAL: g3069.t1 original gene structure, not modified by PASA NODE_7997_length_393_cov_23.0881_potentialcontaminant AUGUSTUS gene 100 265 . + . ID=g3069;Name=g3069.t1 NODE_7997_length_393_cov_23.0881_potentialcontaminant AUGUSTUS mRNA 100 265 . + . ID=g3069.t1;Parent=g3069;Name=g3069.t1 NODE_7997_length_393_cov_23.0881_potentialcontaminant AUGUSTUS exon 100 265 . + . ID=g3069.t1.exon1;Parent=g3069.t1 NODE_7997_length_393_cov_23.0881_potentialcontaminant AUGUSTUS CDS 100 265 . + 1 ID=cds.g3069.t1;Parent=g3069.t1 #PROT g3069.t1 g3069 YMIDAADRERLEASKSELMALLEKPQLAGIPVLVLGNKNDLPNAMSVDELIEEL* # PASA_UPDATE: g3521.t1, single gene model update, valid-1, status:[pasa:asmbl_7919,status:12], valid-1 NODE_518_length_21945_cov_41.2221 . gene 19994 21770 . - . ID=g3521;Name=g3521.t1 NODE_518_length_21945_cov_41.2221 . mRNA 19994 21770 . - . ID=g3521.t1;Parent=g3521;Name=g3521.t1 NODE_518_length_21945_cov_41.2221 . exon 21694 21770 . - . ID=g3521.t1.exon1;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . CDS 21694 21770 . - 0 ID=cds.g3521.t1;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . exon 21377 21453 . - . ID=g3521.t1.exon2;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . CDS 21377 21453 . - 1 ID=cds.g3521.t1;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . exon 21030 21100 . - . ID=g3521.t1.exon3;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . CDS 21030 21100 . - 2 ID=cds.g3521.t1;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . exon 19994 20712 . - . ID=g3521.t1.exon4;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . CDS 20173 20712 . - 0 ID=cds.g3521.t1;Parent=g3521.t1 NODE_518_length_21945_cov_41.2221 . three_prime_UTR 19994 20172 . - . ID=g3521.t1.utr3p1;Parent=g3521.t1 #PROT g3521.t1 g3521 MKKQVKPLRFYPIIFLVSALPGLVNRIQNAANPDHRIFALVLLQATFAPLFGAFLAVTFGFQMDALKRCNWSRMKSMFLAARKPNFGAVREFQLTPDSSHHSNADYDKMQDEDSGSDVENDGIAMHSSPCDATTTLAAPSGSGVGGSQGGDTAGSQSQDDRRGKQSAKEENANRKSFLASSDRGGSGDQGDRGPPEEDDDAGDSGHDRHESFRMRVLPSFSLPFGQRRSHSNYARMSLPGNGDGDDDDNAGLLR* # ORIGINAL: g3518.t1 original gene structure, not modified by PASA NODE_518_length_21945_cov_41.2221 AUGUSTUS gene 81 5468 . - . ID=g3518;Name=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS mRNA 81 5468 . - . ID=g3518.t1;Parent=g3518;Name=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 2426 5468 . - . ID=g3518.t1.exon1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 2426 5468 . - 0 ID=cds.g3518.t1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 2125 2213 . - . ID=g3518.t1.exon2;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 2125 2213 . - 2 ID=cds.g3518.t1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 1742 1906 . - . ID=g3518.t1.exon3;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 1742 1906 . - 0 ID=cds.g3518.t1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 1359 1499 . - . ID=g3518.t1.exon4;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 1359 1499 . - 0 ID=cds.g3518.t1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 745 885 . - . ID=g3518.t1.exon5;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 745 885 . - 0 ID=cds.g3518.t1;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 81 167 . - . ID=g3518.t1.exon6;Parent=g3518.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 81 167 . - 0 ID=cds.g3518.t1;Parent=g3518.t1 #PROT g3518.t1 g3518 MGGKWARDPTKAHNTHVHARSPATTVQSSATSTPSHPAIWRSLVSDTRSFESGAIVAVGRKRSRTESSDGVVLSNKRQRGSFNSAPPAVNAAQSKTQQQRPVDHYRQQRQQQHQHQHQLLQHNHRDATRRRKGLLENNGERRSRAPVKQGEADIRGSNHSAAPPEVIRVQSAFSTSSLRPLSITPSAHGGVHLRFDDDNEPVVRSVVAPVSARVASLTAIETKTPHGVSVESADRKAVVGVSTGGVVEGRKRRQRDEDLTPTDDSGKRARIEDIDKKYAHATSKRLTGVDTAFVGLGKDPSRAVTGIANTSGVGLYAEGGRKEAAVGVEATKEERKRLKKERRKARRQERAEAWEKEKASEFATDKNSESSAVADRQGTSSLLAPDTKARKRKLAEEAAGKNSEKTAGEGKKAKKKKKREARADSVLEGLRGSKTDGGKKEGDEDDTGLVTARSKHGEAVERGEEKGKEGGRVVGLGQAKCEKEKPGKQAETEEERSRRKGYAAAKTPIWTVATAKKPTTAFVAVTTPRAPSGRAAIQPQESTKTSLEEKGGRFYGGIAIDKGSANHPKGLTLGGPFTGSVSPVNTCVTAASAGIPTVKKAKTRGKKKKAKAARLASKSNNNTGVENIMCDSDTATPITAVFTIDLTTTPPPPPPQPVVGTVTATPSSASIVGSTHDTTSTTTANVGCSADGRRFRVREPPVLTAATVTLSATAAPRTTGLSRSGRKRLNKRKRELAAMSAAGQSMQQQQQQQQPPPQQQQQQQLQQQQPVLLRGQGMDQASEQQYATMTGSQKAPAASLADRMASAPRAFASSAQTATKAIGPTRIAPPLVMTNAPAAKGTQTPSQCNRTIGSVYSATRVAVVVAPVPTLIPTNALQGNAPRAIATTAATRSSISSPAVSRSSIHSTLSNNSSATAFVDLTSDPTDKRRLSSAPDKKGGAETTGEGRLGTRRDSPETKRTVAVAKPIPATNTKRGKRRSSLSSLSAPIDLIVIDDSDSDDVSSKQVKATGRIVENKVTATDALTVSLGGLAVSKDSNGAQARVVAEALGDGQPSDALTRVGAYTVTRRDMWTLRPGAWLNDEACSCACVECVLACVEYIINAYLGLIVRRSSESLGRLPSTYACSTYFYAKLRQSGYEGVRRWAKTTDVMSTDLVFAPIHLGNHWCLAVVTPSARRVDYYDPLGGRNKECIEILRDFFIAEARNKKGVDIETSEWTLNASM # PASA_UPDATE: g3519.t1, single gene model update, valid-1, status:[pasa:asmbl_7917,status:12], valid-1 NODE_518_length_21945_cov_41.2221 . gene 5886 10155 . + . ID=g3519;Name=g3519.t1 NODE_518_length_21945_cov_41.2221 . mRNA 5886 10155 . + . ID=g3519.t1;Parent=g3519;Name=g3519.t1 NODE_518_length_21945_cov_41.2221 . exon 5886 9327 . + . ID=g3519.t1.exon1;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . CDS 5886 9327 . + 0 ID=cds.g3519.t1;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . exon 9437 9695 . + . ID=g3519.t1.exon2;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . CDS 9437 9695 . + 2 ID=cds.g3519.t1;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . exon 9880 10155 . + . ID=g3519.t1.exon3;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . CDS 9880 10015 . + 1 ID=cds.g3519.t1;Parent=g3519.t1 NODE_518_length_21945_cov_41.2221 . three_prime_UTR 10016 10155 . + . ID=g3519.t1.utr3p1;Parent=g3519.t1 #PROT g3519.t1 g3519 MAPPPIDRARHSGSAGSFAPSAAAHLNEPLGGTSRDTVVDRTSMTRTAQSIASRVASYAECIGPHRSVHTRNKAIDAVRREISFSKEAAVHAFNSASGLKRLFLLLPSSLDSCKEGDLRTIELCLAVAADCARLTATSRSAIAQCGGLNAISRIVFQYSLQCTRDTAATCIVQSSGSSVGLSPGKVPGKCESTHDTLDESKQGHSRLFSHASAWHRIARRSFRVCSALAVEMECCTALKQYGLMDDAFSLASNVTCDARVREAAASTLGCIASLSLPSHAGGGAAERGISDETVVALDTAEELCESALSSVARVLRACQLGEGGEVWHRLCDHVIGLLMNIASSHPTRVMAAAAADILGAIASLQDLPQSQDNGDFFLQLEQGKHRGEAVLVLHDVAMRACAGALNVLRRACSTIPRLASKLSGAHAATIAAMFAVGIDGDTRLPIANAHIHTHTTQLERVSASDRFVFPLSADAIRSGESNRENMTCDDVRSGGASSDRSMTLRVREYAGMLLSEAMIADPTAREALVRFSGSVHDVSMAQSHMATRLEGVLELAKSLCATSAPGSANAVTHDAPGSVCILAGIVCVFVRWTSADRLSKTAYDMLAKLSTYPQCASALLSAGLHGLLWPDKGKDHPSTGAHSLQASEETDITAASECDERHENCVSTVQSFGKRRPPRHLVMRISLLVSSHGKHSIAFAGRRACMDHCALLMQRSSFPLDGGSDDPHCDDADGTTGPLLSVGSMNDAEQRHGMLGNEGSKGGVDNILNLASSLSLCVLSHAPAAVVAIEGGSGFVVALMEALFASNPTSPARFVRAASRRSPDGKAIAETPLSRANTLIVSAESNTGRPNKLRRTGDHVTVEMNGQLADGFERFFRAAVTVASVPSFAQRLSAAVGLHLRASREHARDQLGDTVVGKAAMDAAVVLSFCRNPFMFVDAVVGSGCLCVLSRAIASCICVAGTATSLRSVSCTCLSGGGFARAALLSTRAAWVSVEAQRVRCLAATSRTLLSRVDLHRRLAAERVCLATTRSIATAVDERPVEYPSPGALGGDTGNFPGGVVDLRMDDGAMFRANRTALAEASPMLSVLLTGESFSDSSKTVVRIRDVGSIPFARVVFRIPGSALATVTPPMWWPGPADHFHAHVVACDRFMVGSLRRALLDEARDLLHAIEHWGAGSFASDANDDHSGNDAIELFNAQYGDAFFFVVNAFVLSCQHGIGELAPVTTKWMLFCGGVENAPCFADSLLEATGLRWDDVHLPFAESIGACLTEFIAESQRL* # ORIGINAL: g3520.t1 original gene structure, not modified by PASA NODE_518_length_21945_cov_41.2221 AUGUSTUS gene 12290 19664 . + . ID=g3520;Name=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS mRNA 12290 19664 . + . ID=g3520.t1;Parent=g3520;Name=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 12290 17148 . + . ID=g3520.t1.exon1;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 12290 17148 . + 0 ID=cds.g3520.t1;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 17435 17486 . + . ID=g3520.t1.exon2;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 17435 17486 . + 1 ID=cds.g3520.t1;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 17870 18107 . + . ID=g3520.t1.exon3;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 17870 18107 . + 0 ID=cds.g3520.t1;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 18583 18755 . + . ID=g3520.t1.exon4;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 18583 18755 . + 2 ID=cds.g3520.t1;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS exon 19161 19664 . + . ID=g3520.t1.exon5;Parent=g3520.t1 NODE_518_length_21945_cov_41.2221 AUGUSTUS CDS 19161 19664 . + 0 ID=cds.g3520.t1;Parent=g3520.t1 #PROT g3520.t1 g3520 MASQRCTGEFRIVSIVAVLVCAFVVVLRPVDGAPLTLTRIVRLVASGSASTLANVGDFRRDDQGANGGWIFTIRNGSQTLTWSDTTDETAGSFNVAGNKTTPYTRILIDANGAIVSCASGSVARVTVFTGALGLRNITVRGCTDTDNMSGTSGRFAALFRVSKDGAVELSDASFSDLNGVRVVDASGTVMMRNIRLSRVVIGGDSAMCNVQDDCGGAALLRLVDGGTATVENTSVVDVACGSPCRGCVIVAYGSASVAAARLSTLRTSADLAGVAVFTASAQGVFSESAFMSARGDSGCGAFLVYGSAVVAVKSSVTNDTTADNGGLACVEGDATFSLEGMQISQSRTTRGGGCLAVFGNSAVTVSSTNVTGVSASSGGFLSAVGSAQITATDLAVYDAHVDDFGAVFTVGQSASFTAVRMSTLATNSDTAGVGHAGDNARVDISESSFKSSRAVSAGGAFYFEGNAVVSLLDSVADGTSAGFGGLGCLKDGATLSLAGMQISRCSARGVGGALALVGSAVLVVASTNVTGVTATGGGFIAASDDVQIITTDLSVVDAVASDWGGAFDMDGNASLQLTRGTSFNCSISADSSGSGGFALFSEHANGYFEDCLWLAEDIVYEVPDGLHSTNSLADWTLNAPGGVFRLVETAQVVVANCEARHFHAQFGAFAWVGGLSTLTVSGSRLLNIGSVNGGVFSADSNSTTDISSSVVRDCYAINQGGFIDAATSAIIRISDVDVFGCSAQYGTLFCLNDQTTADVHGLHARDAFAWNIGAVAYLQHTSHMTLSDAIIMNSLAGFDGGVLGVTGKATLNVQSVVVTAARAAKTGGFAIIDNMASVHMRGLVLSNVTAGLSGGAFFVGGNSSLLMEDVNATHTVAVVDGGFMRAENTTRVVMSAVKVSNCTAQDGGAFGVYGSAVLAMADVVARSTAANENGGFLFATDSCRVSVSRLSLGVSSAWNGGAFIASGYSSLDVLSSRVDAVSAVDYGGFARVRNHADMRLSSSHVTNASAGYGGAFFVDSLGTVTINDVVAENVRATDNGGFANGQNGLMNVSGLILRDASVSASGGVFYMSRSSRLLVTLSTFEGVRADDEGGFLYARHTSRTTVLRVRIAGTDALSGGAVSVADAAVVDVLSSTVVGAHAIGDGGVAHTGDSATLRFVASSLSVAAAERGGVVCMTGASVVSVESGNATLFASASMGGFAYTEGTANLIVTGVTAQNGKANTGGLVYSAQNSTVGLVRVNVSSISAYASGGCMYADDTSAVIVSGGTYSGCVAGAIRATGGAGGVAFVGFGASFSVMSDMLVLAPSAVLGPAFYSQHMIDPLSQAHIVCPVLPADYNDPQLPGWRAGGLFSGSPSFLNLTVSGTTASLQKISVSSGESFPPLSLSILDGYGNQISTDGKAQLSVRLIVSPLDQTDVANAAAQAPLLRGDVERSYGTGSVVTFNDLRLYAPPGRYKLAAVSSNPFLYGELDLDVKRPSLLRDFMVDVTIEPCPSGQKSSAVVVDGKEMAECVPEGRSNTLAIALSSSFVGGAVLIAALGVARWRLAAAMRMKRDLATHAEFMSKHMTKQADLMAMQLKRENVELLEKLGEGEFGVVCRARVVSSDGRPRVCAAKMLKEGATFDQRCDFLQEAAVMQGMAHPHVVSLCAIVVESDPMLILIEFVPHGNLLQFVRSVPAIHRTPASASVRIFEVFCEHIALGMAYLADMHIVHRDLAARNVMVGQDAFGSYLAKIGDFGLSGDMGLKNYFRKTGKEKLPVRWMSPEALSQRKYAEASDVWSFGVTAWEMFSFGEVPYGALAGHNVLGHVRAGGVLSSPPCCEADFYRAIIQPCFAHDPASRPTFDHIANAAFPGVMEARKSNENSRRQSGAVAAGHGHPGENTNASHVTMVVATGDGSTVGFEGYSNVFADHTDQQDAFDGDHDRRVDFGASMIALLPMGHN* # ORIGINAL: g1960.t1 original gene structure, not modified by PASA NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS gene 245 2793 . - . ID=g1960;Name=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS mRNA 245 2793 . - . ID=g1960.t1;Parent=g1960;Name=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 2761 2793 . - . ID=g1960.t1.exon1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 2761 2793 . - 0 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 2491 2582 . - . ID=g1960.t1.exon2;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 2491 2582 . - 0 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 2267 2338 . - . ID=g1960.t1.exon3;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 2267 2338 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 2089 2160 . - . ID=g1960.t1.exon4;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 2089 2160 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 1937 2008 . - . ID=g1960.t1.exon5;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 1937 2008 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 1630 1701 . - . ID=g1960.t1.exon6;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 1630 1701 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 1473 1541 . - . ID=g1960.t1.exon7;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 1473 1541 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 1319 1390 . - . ID=g1960.t1.exon8;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 1319 1390 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 1006 1077 . - . ID=g1960.t1.exon9;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 1006 1077 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 698 769 . - . ID=g1960.t1.exon10;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 698 769 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 550 621 . - . ID=g1960.t1.exon11;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 550 621 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS exon 245 316 . - . ID=g1960.t1.exon12;Parent=g1960.t1 NODE_3184_length_4079_cov_23.2577_potentialcontaminant AUGUSTUS CDS 245 316 . - 1 ID=cds.g1960.t1;Parent=g1960.t1 #PROT g1960.t1 g1960 METIVGRLGGTAEGVIGACPDTCTCNGGAVLSCAFLTGTTDLNWSSKQLTSIASGLFDGLPGLKTLYLNANQIATLPIGIFDKLTALTQLQLQWNQIATLPSGIFGKLTSLDNLNLVSNQIATLPSGIFDKLTVLRELLLNSNQIALSSGIFDKLTALSLLDLRVNQIATLPIGIFDKLTALTQLNLGLNRIATLPSGIFDKLTALKELDLRVNQIATLPSGIFDKLAALTQLNLGTNQIATLPSGTFDNLIKLTWLSLNSNQIATLPSGIFDKLTALTV # ORIGINAL: g5726.t1 original gene structure, not modified by PASA NODE_2644_length_5560_cov_42.8204 AUGUSTUS gene 591 4923 . + . ID=g5726;Name=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS mRNA 591 4923 . + . ID=g5726.t1;Parent=g5726;Name=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS exon 591 1960 . + . ID=g5726.t1.exon1;Parent=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS CDS 591 1960 . + 0 ID=cds.g5726.t1;Parent=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS exon 2303 2799 . + . ID=g5726.t1.exon2;Parent=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS CDS 2303 2799 . + 1 ID=cds.g5726.t1;Parent=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS exon 2999 4923 . + . ID=g5726.t1.exon3;Parent=g5726.t1 NODE_2644_length_5560_cov_42.8204 AUGUSTUS CDS 2999 4923 . + 2 ID=cds.g5726.t1;Parent=g5726.t1 #PROT g5726.t1 g5726 MNKSRERVAELRRQYADDAAFAKAGSTDTPVDARVSVTTDEGAADSLAISKKALANVLAAYRKEKESTLPGDGPSTLDGTKTGIDGDSGQPVRRMRTAADERLRTLPGPKRSFRDWRASHVAALLVSCNIPAHDIDMRAIESGGMHGWRFFAALDGDRVIRSFLVPNAGEVGSDDTKDDVGDVENSDPLSSKADRAAAAAANEILSAAITTADDHRRAIFLRAGGLGALGSHEILWWLDSIQHVGAVGALARAIGLLSSSPTSADVVDNQSRRQTVADVFRRCGLASLMSGGGQPTAVDMTGSVVASITLDDWIGPLGLPVYEAKYLTASVQACMPIRESQPPVDAGALPDHAAELTRPATAAAPPLSVDSNRSKTATPGTQRRGGSGELSRLALQEKGQLKTFRLKAASLHAYESYRRMRYVLDNNREPPDDFSAFPIEDPDDIGLFGAYLRVGGQAAMAIARSMLGCLKALVSQNDDIMVPPDVDVVAFLGKATYTASRISRILGITYPNAPDPVCDGLILRMVDVMDRSHPLDIRTRAGLLLLSACCARATTFMRIKYGNIRFSTMEGLFEMINESTIHPEARSHLACKQQEARAAKVALDVDNGKSVAAAQVGRMVCHVIKEEFKDVFVFCPVSGSPTGQAVIQVGTPVTGEDARTSFVYCVICLVIHPVHGKSRYVKQLIVSHRKLPLPSGIRAGSASCIFMAETVPCVRDIRDVIASMEMEGGWTRHATPATLAQSVMMSRYVRMLVAEYTDITGQVLLGRRRRKEILNEASVLITAEVADAHKYCENAQRHTTEYHTWTESTRRFRDAALERGLGFDASLLAEEYKKSYNPNHRIQEREQAADCAHCSTQANRPVRMVRVSGAAKPVLMPMAAAAAAATSVVGDSRVIAPPLLQTIAPPLPQKLIAPPPPQTIMPLPLPPPRLVLFQCARCGHRVHVRMTGDDVAGTDEQQHQQHQQHQQQQQQQQQGDASDVHMHDAAGGGDSDSPSSALRAASAAAASAGSAGSAASAAATAAAAAAVADGGGHSSCRAADVLEGPSRIVVRTGSSSAHRADAIARGAQWAVHHSVVVRCPHCRIEGAHPAVTDVFVQSSQTATADHHRYSSIFLSVQLHVCRSNANANANAKGDGGNSGGGGCRRFFLRCVDGDPDVFVRVADGGSGGGTDTVQHMPLPPPPVHAGIIAVRDPENGGIPATIPCEHAAVAGGDSSGTRDLAGHAAQAPEVAADQKQEHWQQQQHVQCNGTSAMAPPSLQVHSL* # ORIGINAL: g10740.t1 original gene structure, not modified by PASA NODE_918_length_15885_cov_41.0104 AUGUSTUS gene 507 4265 . - . ID=g10740;Name=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS mRNA 507 4265 . - . ID=g10740.t1;Parent=g10740;Name=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 3773 4265 . - . ID=g10740.t1.exon1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 3773 4265 . - 0 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 3447 3555 . - . ID=g10740.t1.exon2;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 3447 3555 . - 2 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 3098 3217 . - . ID=g10740.t1.exon3;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 3098 3217 . - 1 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 2685 2867 . - . ID=g10740.t1.exon4;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 2685 2867 . - 1 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 1994 2088 . - . ID=g10740.t1.exon5;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 1994 2088 . - 1 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 1600 1712 . - . ID=g10740.t1.exon6;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 1600 1712 . - 2 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 1166 1339 . - . ID=g10740.t1.exon7;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 1166 1339 . - 0 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 803 943 . - . ID=g10740.t1.exon8;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 803 943 . - 0 ID=cds.g10740.t1;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS exon 507 680 . - . ID=g10740.t1.exon9;Parent=g10740.t1 NODE_918_length_15885_cov_41.0104 AUGUSTUS CDS 507 680 . - 0 ID=cds.g10740.t1;Parent=g10740.t1 #PROT g10740.t1 g10740 MSAPAHSHVCMRCTAGFDGPKALSEHHKDSGHQEIHCLCAGIFSTQEALKAHWEERAAAGSSCKPKIKALSCIVCFTQYFDKPLYQAHLDTTGHGARFAVKAKGTPATAPAAASTPEPAATSAAPVAPETAPSGGPASTEVDGDQVVTPWEVQAVGGVDYDKLIVRFGSQPITPELLQKIEAVSGRPVHHFFKRGIFFSHRELDVLLDEYVKGEPFYLYTGRGPSSEAMHLGHLIPFMVTKYLQEAFNIPLVIQMTDDEKFLWKGLSIEEAHRLTRQNVKDIIACGFDSRNTFIFSDFQYMGGKFFENVVRIQRCVTENQIKGIFGFSESDNIGKFAFPAIQAAPAFSNTFPQIFGPKSTYNCLIPCAIDQDPYFRMTRDIAPRLGYKKPALCHSKFFPALQGASTKMSASDTTSSIFLTDSAEDVALKINRYAFSGGQMTKKEQEELGANLDIDVAYQYLTFFLEDDAELDRVGKAYAAGKMMTGEVKGILIRELQKIVSGHQQRRALVTEEMVDLFMSARPLDLPPFFKKN* # PASA_UPDATE: g10741.t1, single gene model update, valid-1, status:[pasa:asmbl_9988,status:12], valid-1 NODE_918_length_15885_cov_41.0104 . gene 4810 15576 . + . ID=g10741;Name=g10741.t1 NODE_918_length_15885_cov_41.0104 . mRNA 4810 15576 . + . ID=g10741.t1;Parent=g10741;Name=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 4810 4933 . + . ID=g10741.t1.exon1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 4810 4933 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 5269 5598 . + . ID=g10741.t1.exon2;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 5269 5598 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 6074 6348 . + . ID=g10741.t1.exon3;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 6074 6348 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 6684 6773 . + . ID=g10741.t1.exon4;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 6684 6773 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 7234 7274 . + . ID=g10741.t1.exon5;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 7234 7274 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 7556 7688 . + . ID=g10741.t1.exon6;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 7556 7688 . + 1 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 8098 8343 . + . ID=g10741.t1.exon7;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 8098 8343 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 8583 8710 . + . ID=g10741.t1.exon8;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 8583 8710 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 8992 9115 . + . ID=g10741.t1.exon9;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 8992 9115 . + 1 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 9310 9364 . + . ID=g10741.t1.exon10;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 9310 9364 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 9558 9627 . + . ID=g10741.t1.exon11;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 9558 9627 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 9919 10111 . + . ID=g10741.t1.exon12;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 9919 10111 . + 1 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 10566 10658 . + . ID=g10741.t1.exon13;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 10566 10658 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 11329 11437 . + . ID=g10741.t1.exon14;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 11329 11437 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 11936 12010 . + . ID=g10741.t1.exon15;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 11936 12010 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 12320 12543 . + . ID=g10741.t1.exon16;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 12320 12543 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 12674 12823 . + . ID=g10741.t1.exon17;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 12674 12823 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 13140 13270 . + . ID=g10741.t1.exon18;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 13140 13270 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 13467 13617 . + . ID=g10741.t1.exon19;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 13467 13617 . + 1 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 13777 13832 . + . ID=g10741.t1.exon20;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 13777 13832 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 14157 14361 . + . ID=g10741.t1.exon21;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 14157 14361 . + 1 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 15043 15109 . + . ID=g10741.t1.exon22;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 15043 15109 . + 0 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . exon 15425 15576 . + . ID=g10741.t1.exon23;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . CDS 15425 15546 . + 2 ID=cds.g10741.t1;Parent=g10741.t1 NODE_918_length_15885_cov_41.0104 . three_prime_UTR 15547 15576 . + . ID=g10741.t1.utr3p1;Parent=g10741.t1 #PROT g10741.t1 g10741 MADAYDSQFQSRLEEWGGGDDEDAWERDHADDLEVAREIHHEMEAEASTVASPLISDDAQCNDVAADHVTMGKRAMAALSLMTAGAHRSPTAAPFGSIQATKKTPSPLREPSTAHSYSPVNVYKRASALSSRRQLREALFGDDSEEDGDNRESRSPKRARIENSAEDVIESEDFIESDDAIDNAAAAVPAERVTWTTGVAHAGDTIDATWRGLHHVPPQGPSVPITGESGKRVYLELSQPVVASSEAIRSHRPAKGTLLSVPLSVLKDQIIAKRVSASMERSEKALRLAAASADFEEADARDAMRVDSHVPTKLWVDKYSPRKYTDLLSDERINRDILRWLKSWNPCVFGTKAIGARRVPLDSIAPDVNTAAAPGRHAKQRGATKGAQPNYRKPEPAADTAPPPPDPIDAATKLDANGRPSTKVVLISGPPGLGKTTLAHVIGAHCGYSTVEINASDDRSPDVFRQRISSATQMRSVSSRDSRPNCLIIDEIDGATSDAIAVLLDFIKAGETAVKGKKTAKKGKASPLSRPIICICNDLYAPALRQLRPLAYCLTVPPTSTPRLAARLDEICRTEGLQTDVGVLTMLCDMAENDIRSCINTLQFIKSKEGDRVSASLLSQVPIGRKDAHSTLFQVWQRVFHIPRDPNGTAARMTMLKMHDATAASTSQGRAAKSQAIMEVLHTVSSNGESDRIVLGCFENYLRVRFTDVAMGKVNKALEFLIFYDILDRRIHAGMNFELMKYTSYVPAAFHLNCASVDRPRLAYPSAGLEAQRREAHNSAVLGTVIAETHARLRPYTTTRTLVTDVLCALVDVISPAMRAVSAQLYSVAERQTLSDVVRLMVAYSLTYKQAKGRDGQYAFTLDPPVDEICEFRDQPLSDPSGMRVMFRPAAPTLSAQPNKKRLSYTVRQMVAHEIALEKLRVVSKPSASESEGVVSAGSGVDLAGGHRRARDDRATGEVRAPPVPVPQRTAAQKELSREERLAENRRKMAEKLSRITDEAKPVKDFFGRLVVPSAPVQEGEQPADDVKQRKPLPLRNLQPLWYKFNEGFSNAVRRTVHVRDFM* # ORIGINAL: g2375.t1 original gene structure, not modified by PASA NODE_1465_length_11129_cov_20.9464_potentialcontaminant AUGUSTUS gene 269 547 . + . ID=g2375;Name=g2375.t1 NODE_1465_length_11129_cov_20.9464_potentialcontaminant AUGUSTUS mRNA 269 547 . + . ID=g2375.t1;Parent=g2375;Name=g2375.t1 NODE_1465_length_11129_cov_20.9464_potentialcontaminant AUGUSTUS exon 269 547 . + . ID=g2375.t1.exon1;Parent=g2375.t1 NODE_1465_length_11129_cov_20.9464_potentialcontaminant AUGUSTUS CDS 269 547 . + 0 ID=cds.g2375.t1;Parent=g2375.t1 #PROT g2375.t1 g2375 MWNHITLHNVVMFGQKVGFLKFETDVRFGENKLPGIAFCRGNSVAIHLILYCPETQLHYAVLTSQARVPVGRRVLSRVVSPRKDFEGERLSF* # ORIGINAL: g1470.t1 original gene structure, not modified by PASA NODE_1398_length_11603_cov_38.5318 AUGUSTUS gene 8157 11041 . - . ID=g1470;Name=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS mRNA 8157 11041 . - . ID=g1470.t1;Parent=g1470;Name=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 10809 11041 . - . ID=g1470.t1.exon1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 10809 11041 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 10463 10598 . - . ID=g1470.t1.exon2;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 10463 10598 . - 1 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 10177 10314 . - . ID=g1470.t1.exon3;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 10177 10314 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 9612 9958 . - . ID=g1470.t1.exon4;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 9612 9958 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 9370 9454 . - . ID=g1470.t1.exon5;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 9370 9454 . - 1 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 8992 9105 . - . ID=g1470.t1.exon6;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 8992 9105 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 8775 8855 . - . ID=g1470.t1.exon7;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 8775 8855 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 8473 8596 . - . ID=g1470.t1.exon8;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 8473 8596 . - 0 ID=cds.g1470.t1;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 8157 8278 . - . ID=g1470.t1.exon9;Parent=g1470.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 8157 8278 . - 2 ID=cds.g1470.t1;Parent=g1470.t1 #PROT g1470.t1 g1470 MTSSGGDSGEGSKLWGGRFTGKTDPVMEEFNASMRFDKRLWAVDIRGSQAYAACIRDVGLLTPAECAAIVDGLDAVHREWANGVFQIHASDEDIHTANERRLTELIGADIAGKLHTGRSRNDQVATDTRLWLRGEIEQLKVYLKQLISVLVERARVEEEILMPGYTHMQRAQPIRWSQWLMSHAFALARDGDRLMELHRRVNLCPLGSGALAGNPFGVDRASLAASLGFAGVTGNSLDGTSDRDFVAEFLCWASLTMGHLSKVAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNADSLELIRGKTGRIFGACAGFMMTLKGLPSTYNKDLQEDKEPLFDTVDTISGILRVNAEAMRAALSTDMLATDLAYYLVNKGVPFRAAHSLSGQAVRLAETKGVPLHTLTVSDLRSVSEHYGEDATKVFDFEASVEQYKAAGGTSKAAVRQQTTQLSEWLAQF* # ORIGINAL: g1468.t1 original gene structure, not modified by PASA NODE_1398_length_11603_cov_38.5318 AUGUSTUS gene 128 3984 . + . ID=g1468;Name=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS mRNA 128 3984 . + . ID=g1468.t1;Parent=g1468;Name=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 128 224 . + . ID=g1468.t1.exon1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 128 224 . + 0 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 442 674 . + . ID=g1468.t1.exon2;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 442 674 . + 2 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 921 977 . + . ID=g1468.t1.exon3;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 921 977 . + 0 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 1119 1163 . + . ID=g1468.t1.exon4;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 1119 1163 . + 0 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 1374 1482 . + . ID=g1468.t1.exon5;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 1374 1482 . + 0 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 1805 2006 . + . ID=g1468.t1.exon6;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 1805 2006 . + 2 ID=cds.g1468.t1;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 2325 3984 . + . ID=g1468.t1.exon7;Parent=g1468.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 2325 3984 . + 1 ID=cds.g1468.t1;Parent=g1468.t1 #PROT g1468.t1 g1468 MQGYFSLAEYPRSVWFIIGQEFCERFSFYGMKTILVLYLLHFLGLGDEKATSYYHTFTMFCYFTPLFGGIVSDSFLGKYKTILYLSLVYCVGNIFMSVTAIPRVAGNPPMAWGVVLGLGLIAVGTGGIKPCVAAFGGDQFRPEDVVLIRKFFAVFYASINCGSVISTLLTPKLRSDVKCFGREDCFPLAFGVPALLMIVATGLFLGGTKLYTRVPPRGNVMVDVIGTIRTAIVMRWKNRDSLTKHKHWMDWAVDRHGVRLVEDIKAVLRVLVIFLPIPVFWTLYDQQGSHWTLQAQEMSGRVGSITTIKPDQMQAINPILVLIMIPIFEKGVYPCLGRLRVPFRPLQRMGAGMLLTALAFVLAGALQARIEAVQSRSQVDTFASRGEAGVRILDGYCGSPLNVSVLESSQASPGGPFMATVGSALPYVAYPLASDGDTLAAWAVARDIPALNATHLTPIPIVRGEFYTVLWGHAPGGGALAGAILGDPFRGSMPDPSQAKVRIANAVSPSLSPVGGVSLWLSGGPTFDGDGRVNRGVAPLAVGDYYDVPGGRYVITVTSDDGTEVVRIGAADLGDGGVYTVLVTWCGDRAAAALVHDIAPKEISMLWQIPQYVVLTAGEILFSITGLEFAYSQAPASMKSVCQAAWLLTVAFGNLLVVIVSEISFFSRQSAEYFFYAGLLVGVSVIFTLLAMRYKYVGESATRGGNEDGLAAEAYEGLLGEDAAALGIGPMDPHAMAVAMASRRSLVAAEVEEDASERDDVHNRRSNRRGGLLSDDGGESSDDGDDIIYHAPLTRGRMHR* # ORIGINAL: g1469.t1 original gene structure, not modified by PASA NODE_1398_length_11603_cov_38.5318 AUGUSTUS gene 4780 7286 . + . ID=g1469;Name=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS mRNA 4780 7286 . + . ID=g1469.t1;Parent=g1469;Name=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 4780 4860 . + . ID=g1469.t1.exon1;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 4780 4860 . + 0 ID=cds.g1469.t1;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 5067 5221 . + . ID=g1469.t1.exon2;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 5067 5221 . + 0 ID=cds.g1469.t1;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 5466 6658 . + . ID=g1469.t1.exon3;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 5466 6658 . + 1 ID=cds.g1469.t1;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 6916 7034 . + . ID=g1469.t1.exon4;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 6916 7034 . + 2 ID=cds.g1469.t1;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS exon 7251 7286 . + . ID=g1469.t1.exon5;Parent=g1469.t1 NODE_1398_length_11603_cov_38.5318 AUGUSTUS CDS 7251 7286 . + 0 ID=cds.g1469.t1;Parent=g1469.t1 #PROT g1469.t1 g1469 MHDGASPLPPPQLRNSDVDHAAALCIQAAYRGHRVRTQLLRQVQREFENVFEEIEGSVRGYTRPKLIWRDAGLVPPSFFYDPRPVRQIPIPATDIRSRPHASISATATAHIDTLTSAAATLHSASRSALPHSLLAGSDARRLDPMPHDGGDPDARDEPLLFLGDNRPSTAESHVTGAGGKPHVTGTTLDIASTLCAIGGDLSSLSSSFGVSVVLDAGAHLSGGGDVPVAVTDCAQEEEGEETYADDRHRVETEDATCGPVCTSGGSDTGTSSLDDVRSLASTEDDVSEHIDDEAEDGVHDVPSGSRVLHGDTMAHGSGGEERAQDAYPSDFESAESEDDEEDGGSSGNTRDDSARDGARDSASASMDCNSTPHASPTRDARDQSISAAVTPLSLFDISQSINATPHTPTTPSVSQAQRPENKDGGIAVLGRVDRERVSVRDAAVGTTPQAERSRSMESKGEAGVPSPIDEARSVAREYGLDLDALYRMDASSLHRLRESVAMELTWAEEALQSRMATLAVIRERSSI* # ORIGINAL: g2121.t1 original gene structure, not modified by PASA NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS gene 55 2703 . + . ID=g2121;Name=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS mRNA 55 2703 . + . ID=g2121.t1;Parent=g2121;Name=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS exon 55 258 . + . ID=g2121.t1.exon1;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS CDS 55 258 . + 0 ID=cds.g2121.t1;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS exon 591 675 . + . ID=g2121.t1.exon2;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS CDS 591 675 . + 0 ID=cds.g2121.t1;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS exon 828 1009 . + . ID=g2121.t1.exon3;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS CDS 828 1009 . + 2 ID=cds.g2121.t1;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS exon 1217 1378 . + . ID=g2121.t1.exon4;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS CDS 1217 1378 . + 0 ID=cds.g2121.t1;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS exon 2530 2703 . + . ID=g2121.t1.exon5;Parent=g2121.t1 NODE_3593_length_3140_cov_26.383_potentialcontaminant AUGUSTUS CDS 2530 2703 . + 0 ID=cds.g2121.t1;Parent=g2121.t1 #PROT g2121.t1 g2121 RFLEDFLFGSEDAARVPLRLWLQWYGTENSPARSRFNSWVSRTTANKRSQYNKALRRLVDRAVAWYIAQMPKEQIQSEHGETHAQQVKSVKQSWAKSAYRKWRSLSKPGKDDDYGNTEFRNAVTTVFLGSAQAKRHPGASPRITVVTLSDLAYAEVAFESFIEHDISGRSAGASVTTSSSIANRMAIIRTRWTAFPLLQPAISDARKQYSKLVGITQDHNKVARDAFGVSIISDTFGDVARYNRNRFLKAVNATSLIVPSAHATELKL* # PASA_UPDATE: g1330.t1, single gene model update, valid-1, status:[pasa:asmbl_9000,status:12], valid-1 NODE_7125_length_469_cov_50.4112 . gene 2 469 . + . ID=g1330;Name=g1330.t1 NODE_7125_length_469_cov_50.4112 . mRNA 2 469 . + . ID=g1330.t1;Parent=g1330;Name=g1330.t1 NODE_7125_length_469_cov_50.4112 . exon 2 469 . + . ID=g1330.t1.exon1;Parent=g1330.t1 NODE_7125_length_469_cov_50.4112 . CDS 2 469 . + 0 ID=cds.g1330.t1;Parent=g1330.t1;5_prime_partial=true;3_prime_partial=true #PROT g1330.t1 g1330 QGLIVPLHKKGDRTDPDNYRGITLLSCVGKLYNRVLQNRLAGALEDKLADEQGGFRQGQGCEDQLAIIMDVMHRRLNPSTSSRRRPISAPLHMAFLDLRKAYDTVWRDGLWYKLRTLGLPADIIAILQELYAECPNQVLVDGEVTDEFDIRAGLKQ # PASA_UPDATE: g12682.t1, single gene model update, valid-1, status:[pasa:asmbl_8605,status:12], valid-1 NODE_637_length_19858_cov_44.2453 . gene 16781 19854 . - . ID=g12682;Name=g12682.t1 NODE_637_length_19858_cov_44.2453 . mRNA 16781 19854 . - . ID=g12682.t1;Parent=g12682;Name=g12682.t1 NODE_637_length_19858_cov_44.2453 . five_prime_UTR 19734 19854 . - . ID=g12682.t1.utr5p1;Parent=g12682.t1 NODE_637_length_19858_cov_44.2453 . exon 16781 19854 . - . ID=g12682.t1.exon1;Parent=g12682.t1 NODE_637_length_19858_cov_44.2453 . CDS 17082 19733 . - 0 ID=cds.g12682.t1;Parent=g12682.t1 NODE_637_length_19858_cov_44.2453 . three_prime_UTR 16781 17081 . - . ID=g12682.t1.utr3p1;Parent=g12682.t1 #PROT g12682.t1 g12682 MSIGSVGPGRGVQVKGIRIPVDRQSDTGIPSAIVMTLETTSDNVTPASVAMKAPVISVASDAKLHATLSVPDSIDAGTRITCLTVLENPTAAEAFSVVATITADARLSIRKLSLRYPCNEPVVNFGGATKSMECQVGRISNFGSAALDFALDAVDDAHMTGAASASVKVSLAFNDGPAQTANTSTVAINAVSNLVIGAIAAAPTRRPFVPGRAFSVRVPITNQGPSRIASGKAKLSLTFPTNAVAFVLASQPANCSVKTAADKTSIVCSLAELAPGVSLNNPFSLSVSPSFAYTTDKVRVTATITSTQTDPDAVNNEKYDEFPVVFTHDIKFVSASAPTSERRVNQTSAFRYVISNGGVNPTPASGCALRVVVTPSRYNVADTLPIVIAQATGSDTCTSTYEGTNLAYACALTRAITNSTDRAIFSIGFYLMEKGRATVDAALSCPELAPGVPSDTNTANNSRSDTVNYIDFCMLSLSTRPIPDVSTIRPRYVLAGTLRNRAGAVCKNIVVNIATDGAGSQVNQQLSRDSVEGLGGVTYAFPSSSVVSITIANMLDTLSFSVVFDQTTFEVGSAVTLTATASTTTLNLGDNSLLTSRQVMKVGKAVVSVGIVSARTVPPQIARATNGYYFDGTEFKFAPVSTTTNVSFIFGVKNYAEPFDAAVGKKIQLQLQVSLQDFTGFSKVQTYAYSQGRYPTPADDLVIADALNGIAPSYDSNLTASYMRDLFVGVVDSGTKKAQDCTSPLETGEITCTVPAIERNEQASYEVRLYAYNYPKLMGYKLVVTAQLSTVDGALFELASKFTTYRSSMVGVQSFQTFDSVAERSSAVTTSKTDTKTIIIAVVCSVVGIAAIIGVLQWKWKFFNRKPKPPALGLDDAYGASFS* # PASA_UPDATE: g12679.t1, single gene model update, valid-1, status:[pasa:asmbl_8608,status:12], valid-1 NODE_637_length_19858_cov_44.2453 . gene 6175 8261 . - . ID=g12679;Name=g12679.t1 NODE_637_length_19858_cov_44.2453 . mRNA 6175 8261 . - . ID=g12679.t1;Parent=g12679;Name=g12679.t1 NODE_637_length_19858_cov_44.2453 . five_prime_UTR 8146 8261 . - . ID=g12679.t1.utr5p1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . exon 8095 8261 . - . ID=g12679.t1.exon1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . CDS 8095 8145 . - 0 ID=cds.g12679.t1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . exon 7809 7895 . - . ID=g12679.t1.exon2;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . CDS 7809 7895 . - 0 ID=cds.g12679.t1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . exon 7532 7636 . - . ID=g12679.t1.exon3;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . CDS 7532 7636 . - 0 ID=cds.g12679.t1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . exon 7055 7375 . - . ID=g12679.t1.exon4;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . CDS 7055 7375 . - 0 ID=cds.g12679.t1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . exon 6175 6822 . - . ID=g12679.t1.exon5;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . CDS 6532 6822 . - 0 ID=cds.g12679.t1;Parent=g12679.t1 NODE_637_length_19858_cov_44.2453 . three_prime_UTR 6175 6531 . - . ID=g12679.t1.utr3p1;Parent=g12679.t1 #PROT g12679.t1 g12679 MEEHKASLFAYRQQLKQVDIALAGDSTNTELLKLKRDLEEVIQITQDLVGEDSAEHHADGTTGRAVTTAAGLTWHVGDHCQAVWSVDGVFYEAVIDAFDAAGITCTVTYAGFGNTETNVNVASLRPSVTHPPSAAAHAPTGQLSTPAASGAGAPGSRKRTAEVAALLETDEAKAKRIAKEEKEAKRLKAIKKKERFEAKTTEQVAVASKWQQFASGNVKGKAKKSIFASPDNPYGRVGVGTCGIGGKPPSDIKNTRDNWRQALNPADPAGGDAAGAVGGDHHTS* # ORIGINAL: g12680.t1 original gene structure, not modified by PASA NODE_637_length_19858_cov_44.2453 AUGUSTUS gene 8507 10714 . - . ID=g12680;Name=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS mRNA 8507 10714 . - . ID=g12680.t1;Parent=g12680;Name=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 10106 10714 . - . ID=g12680.t1.exon1;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 10106 10714 . - 0 ID=cds.g12680.t1;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 9880 9992 . - . ID=g12680.t1.exon2;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 9880 9992 . - 0 ID=cds.g12680.t1;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 8873 9779 . - . ID=g12680.t1.exon3;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 8873 9779 . - 1 ID=cds.g12680.t1;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 8507 8734 . - . ID=g12680.t1.exon4;Parent=g12680.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 8507 8734 . - 0 ID=cds.g12680.t1;Parent=g12680.t1 #PROT g12680.t1 g12680 MAHPGNQFDLRIAVLWACFAVAVTAGSSLESSDGATSGADGARIPERRGMAPSAATVVQSLTAVVRHIGDDNPRLALDAADADSADMRGVSEEDGGEISALGWTVSFLGRHYNDEKDSTEFRYRAHDSCMHRDNCHPLHSFALGLGDLVHEEHVGGLLRAFSMKPGGSVLWDHPGAHDVRHEGDLTAARGASVVGFAWIDGLERGSSENYSVTFAGDISTASCSAILCAPAAGASGLPRVSRPPPRWASVGGRVEVAIAVGPLVFGGFGGGVRGVQVELVSAERPAEGSSATVWRATHTAADGSFSFDAVPTGIYTVLAQPAVGSHWRRVAVAPGGDACACSTSIHVVGDSVQATAGVQLCLSVSAEALAAFLLRPPADAAWTEASGIDPSIGAGRASSGLPPAEWLRLVRLSRRTAGAGVADGSKDAGAKHAVSRTQRELHDIIADALHGRTLQDVARSHLVASHMTKGRDRGDPDANSFRDGDGDADALVAAAESALVAEGEGEGEGEGGSGSDLWVLGRAVLAARLNAAAGRGLPHVHEEVQRVVIAFAEAVLDACRLTVPAATASARSIHSIHPIHSAGRMGERAQWEGGCADAHAGAFVGAGRRLCSIVNDGS* # PASA_UPDATE: g12681.t1, single gene model update, valid-1, status:[pasa:asmbl_8612,status:12],[pasa:asmbl_8614,status:12], valid-1 NODE_637_length_19858_cov_44.2453 . gene 11444 16128 . - . ID=g12681;Name=g12681.t1 NODE_637_length_19858_cov_44.2453 . mRNA 11444 16128 . - . ID=g12681.t1;Parent=g12681;Name=g12681.t1 NODE_637_length_19858_cov_44.2453 . five_prime_UTR 15915 16128 . - . ID=g12681.t1.utr5p1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 15826 16128 . - . ID=g12681.t1.exon1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 15826 15914 . - 0 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 14656 14938 . - . ID=g12681.t1.exon2;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 14656 14938 . - 1 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 14110 14511 . - . ID=g12681.t1.exon3;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 14110 14511 . - 0 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 13950 14014 . - . ID=g12681.t1.exon4;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 13950 14014 . - 0 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 13156 13797 . - . ID=g12681.t1.exon5;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 13156 13797 . - 1 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . exon 11444 13038 . - . ID=g12681.t1.exon6;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . CDS 11658 13038 . - 1 ID=cds.g12681.t1;Parent=g12681.t1 NODE_637_length_19858_cov_44.2453 . three_prime_UTR 11444 11657 . - . ID=g12681.t1.utr3p1;Parent=g12681.t1 #PROT g12681.t1 g12681 MGHSDAEYAVPDRVWATLLADIRCGQKLRRLSIDQINDKSHPLVSLSDSKAPGARKTSGPSQGSKASLMSLGRGLRHKFTQFFDSFGRKIEPFAGQHFHYHQAELPANLAFSLANSERASFAYESCGMLVIRIESTDASWIVRRTLDDLRVLDVQLHKCTFNRHYSRLERPQADATAPPSAAHAAAIEMHASQYLKRLTAIARGTLTCGSVLGWFEVDNQGHRIHASAPGPAPAPSTALAINVPAIAFAKVTHAFEKKEDDELELKMGDFVAVIDMPTESESPWWRGKMGLEVGYFPRACVELIRTAVSAEPQQPHPPTSHAPMQTTQATAQTPPAQRAAILPPKAAAAVQPVAPLSKAKSSPALRLPISLGARPPASKEHAQPQGPPHLHSHADGPKASQPLARAIVAELAGGKFASHLRSFFNDRKVAGDVLRRSGILRDPVFGADLAEHCQRSGARVPVVIRRCFEEVEKRGMVRGIYRLSGVSSKVQALRAAFDADEAGVNLDPSDGLDIHCVASLAKLYFRELPNPLLTHALYPEFVDCAQMEDGGTAHTGGPRDTLLQRLTSLLSRLPPPHFATLRLLIEHLGRLIAESDETQMDPKNLGIVWGPNIMRAPGGLAESVLHVKHQARIVEALLTHKRALFGRDSVLVLQSEEAAAEVVEAEKEILAHAAIAEVSDGAEEDDTGSPSGEHGMGERWSSAEYVAADTTHQPLPLRPPAMQPPPVPAPAAAADDGREYAIPSRERSVAVSAFAAAGMPIPPPRVRLGAATGARREPELRRSMSLGATDFASVPVDCPPTAADAADSAYDPATLRRSASNSAHVRPKPLPRPPPKQSLPAVLRPAHASNIASAPGLTQSASLDDVTWRMRSDSANDDGDYFYCDVEPRPRLGSAPDKPLPVPPPVSRGANPPMSTQPSGEHTEHVSGRVDAKAESPRAPPKKLPRPPVKTSG* # ORIGINAL: g12678.t1 original gene structure, not modified by PASA NODE_637_length_19858_cov_44.2453 AUGUSTUS gene 4280 5948 . - . ID=g12678;Name=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS mRNA 4280 5948 . - . ID=g12678.t1;Parent=g12678;Name=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 5870 5948 . - . ID=g12678.t1.exon1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 5870 5948 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 5620 5702 . - . ID=g12678.t1.exon2;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 5620 5702 . - 2 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 5423 5532 . - . ID=g12678.t1.exon3;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 5423 5532 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 5257 5338 . - . ID=g12678.t1.exon4;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 5257 5338 . - 1 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 5063 5170 . - . ID=g12678.t1.exon5;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 5063 5170 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 4713 4976 . - . ID=g12678.t1.exon6;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 4713 4976 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 4445 4615 . - . ID=g12678.t1.exon7;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 4445 4615 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS exon 4280 4324 . - . ID=g12678.t1.exon8;Parent=g12678.t1 NODE_637_length_19858_cov_44.2453 AUGUSTUS CDS 4280 4324 . - 0 ID=cds.g12678.t1;Parent=g12678.t1 #PROT g12678.t1 g12678 MTRVADLAQSITPATAKAVEAFGLANVVTFLNHASERLKAGTEEQGPDAGVVETEFELIRRGAIFQLAKFPCRANELAHVSAMPVRTGFLDLDALLCGGLRSGDIVEFIGPSPSGKSLLCQHIAMNCASAGAEVATIRSGSNQPSLASVSCFYSGNPGALNRILDTVVDDSYELYDVLSAMVTAGDGLAAPDHSSRPQKIVIVDSIAAVCAPILGQCTQGHAMLASIGSLLRRIAASGTIILVTNHSLGGAQPSSQEEKAALGGTWTVISTHRIGTSVAHTLEKGFVHIALEVWKSIRKLPNSDRTATIKITV* # PASA_UPDATE: g12677.t1, single gene model update, valid-1, status:[pasa:asmbl_8606,status:3], valid-1 NODE_637_length_19858_cov_44.2453 . gene 168 3565 . + . ID=g12677;Name=g12677.t1 NODE_637_length_19858_cov_44.2453 . mRNA 168 3565 . + . ID=g12677.t1;Parent=g12677;Name=g12677.t1 NODE_637_length_19858_cov_44.2453 . five_prime_UTR 168 276 . + . ID=g12677.t1.utr5p1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 168 287 . + . ID=g12677.t1.exon1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 277 287 . + 0 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 419 538 . + . ID=g12677.t1.exon2;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 419 538 . + 1 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 703 781 . + . ID=g12677.t1.exon3;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 703 781 . + 1 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 936 1074 . + . ID=g12677.t1.exon4;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 936 1074 . + 0 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 1368 1641 . + . ID=g12677.t1.exon5;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 1368 1641 . + 2 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 1942 2788 . + . ID=g12677.t1.exon6;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 1942 2788 . + 1 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . exon 2946 3565 . + . ID=g12677.t1.exon7;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . CDS 2946 3446 . + 0 ID=cds.g12677.t1;Parent=g12677.t1 NODE_637_length_19858_cov_44.2453 . three_prime_UTR 3447 3565 . + . ID=g12677.t1.utr3p1;Parent=g12677.t1 #PROT g12677.t1 g12677 MRKVKNVVNNYSPAEVKVREATSNDPWGAPGTLLADLAKSTHNFEQFPEIMNMIWKRLNDHGKNWRHVYKALVLLEYIVKSGSERVAKCALENIYTIQTLKDFQFIDPTGKDQGVNVREKSKQLVALLKDDERLKEEREKALKLLDKFAGGMEGRANDGDQPSHGSDSRGAPGSDFRPRSAEEEERQVQQALEMSKREAEQRRPQQQWGGQASASDNAWGAAPQQSAPKQSDPWGGTPAAATPAAAAAPKKDPFGDQPDPWGSFDAAGRSAAPAPAPARPPPPQSRVSQPLGDVWSTPAPAPAPAAAADPFGGFGAPVQAARPAPQDPFGFGGQPTAAQPIAAPRPVQAQVQPTAAPIDPWGGSSGGFGAPAAPAGGADVWGAPVAQQQQQQRPQQSRPMDPARMMAQIAVNATQIDEFSKLSQRPGGAPAPAAAPAFALAPAQPAADPYVMSSMSGALPDPFGATLPPTVPLQPQRPGQPAASAPVNSQSGLWSGTGSLVNLDALATPSKPASANPFGPSPAQQVRPVVSPAGGTANPANPFHQPSPSMNQLRTGDPLSMGMQPLQTSPMRPAVPAAASPFGVPAAAPVGYGAAPTAYQYGAQPVIGANPYGAQPMGAYGAQPPAAAYGASPFGQPAPARPPAPQQGNPFQNSGW* # ORIGINAL: g1059.t1 original gene structure, not modified by PASA NODE_866_length_16553_cov_42.2299 AUGUSTUS gene 8846 10775 . - . ID=g1059;Name=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS mRNA 8846 10775 . - . ID=g1059.t1;Parent=g1059;Name=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS exon 9447 10775 . - . ID=g1059.t1.exon1;Parent=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS CDS 9447 10775 . - 0 ID=cds.g1059.t1;Parent=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS exon 9220 9333 . - . ID=g1059.t1.exon2;Parent=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS CDS 9220 9333 . - 0 ID=cds.g1059.t1;Parent=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS exon 8846 9130 . - . ID=g1059.t1.exon3;Parent=g1059.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS CDS 8846 9130 . - 0 ID=cds.g1059.t1;Parent=g1059.t1 #PROT g1059.t1 g1059 MSSICMASARLGRAAFVRSGSRLGLPHAHARGHLHGAASGSPKRPKKIQPLDSSSTSQTTQSAVDAMRLRYPRFRATDRVTLSKFRETYNHLRSEDGPSADVVTVAGRVTSRRHSSSKLIFFDIESEGVWLQVVASRAQFEEGSFPVCAAIRKGDVVSFRGKPKRTPSGELSLFCASAEILAPCLHHVPEVLENPEVRFRNRHLDMLVNSHVRRNLVLRRNVIAGVRQFLDARGFVEVETPVLWPSYGGANARPFVTHSHSLGKMPLTLRISPELFLKQLVIGGMERVYELGKQFRNEGIDVTHNPEFTTCEYYEAYADFESIVTNTEAMLLSIVTAANSGSAVVQAEGSEINFTPPFRRISLVDELHRILGVPPAQQSGSVLHNALSQALPRLKVSFPQPCTTAAMLDALVGEVIEPDLVQPTFLVDYPAILSPLAKSHEETPNVTARFELFVNGRELCNAYVELNDPIEQRRRFALQDLARRQGDEEAQIPDESFCSALEYGLPPTAGWGLGIDRLVMLLSQSRTIREVVSFPFMRPLSDAQVEHTRNATNSSPASNDADTQQLKDAQGTHQP* # PASA_UPDATE: g1058.t2, single gene model update, valid-1, status:[pasa:asmbl_9739,status:12],[pasa:asmbl_9745,status:12],[pasa:asmbl_9746,status:12],[pasa:asmbl_9747,status:12], valid-1 # PASA_UPDATE: g1058.t1, single gene model update, valid-1, status:[pasa:asmbl_9740,status:12], valid-1 NODE_866_length_16553_cov_42.2299 . gene 333 8839 . + . ID=g1058;Name=g1058.t2 NODE_866_length_16553_cov_42.2299 . mRNA 333 8680 . + . ID=g1058.t2;Parent=g1058;Name=g1058.t2 NODE_866_length_16553_cov_42.2299 . five_prime_UTR 333 334 . + . ID=g1058.t2.utr5p1;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 333 437 . + . ID=g1058.t2.exon1;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 335 437 . + 0 ID=cds.g1058.t2;Parent=g1058.t2;5_prime_partial=true NODE_866_length_16553_cov_42.2299 . exon 789 959 . + . ID=g1058.t2.exon2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 789 959 . + 2 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 1356 1459 . + . ID=g1058.t2.exon3;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 1356 1459 . + 2 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 1671 1784 . + . ID=g1058.t2.exon4;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 1671 1784 . + 0 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 2029 2172 . + . ID=g1058.t2.exon5;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 2029 2172 . + 0 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 2457 7315 . + . ID=g1058.t2.exon6;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 2457 7315 . + 0 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 7454 7755 . + . ID=g1058.t2.exon7;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 7454 7755 . + 1 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 7861 7957 . + . ID=g1058.t2.exon8;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 7861 7957 . + 2 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 8147 8445 . + . ID=g1058.t2.exon9;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 8147 8445 . + 1 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . exon 8547 8680 . + . ID=g1058.t2.exon10;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . CDS 8547 8680 . + 2 ID=cds.g1058.t2;Parent=g1058.t2 NODE_866_length_16553_cov_42.2299 . mRNA 333 8839 . + . ID=g1058.t1;Parent=g1058;Name=g1058.t2 NODE_866_length_16553_cov_42.2299 . five_prime_UTR 333 334 . + . ID=g1058.t1.utr5p1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 333 437 . + . ID=g1058.t1.exon1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 335 437 . + 0 ID=cds.g1058.t1;Parent=g1058.t1;5_prime_partial=true NODE_866_length_16553_cov_42.2299 . exon 789 959 . + . ID=g1058.t1.exon2;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 789 959 . + 2 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 1356 1459 . + . ID=g1058.t1.exon3;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 1356 1459 . + 2 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 1671 1784 . + . ID=g1058.t1.exon4;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 1671 1784 . + 0 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 2029 2172 . + . ID=g1058.t1.exon5;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 2029 2172 . + 0 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 2457 7315 . + . ID=g1058.t1.exon6;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 2457 7315 . + 0 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 7454 7755 . + . ID=g1058.t1.exon7;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 7454 7755 . + 1 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 7864 7957 . + . ID=g1058.t1.exon8;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 7864 7957 . + 2 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 8147 8445 . + . ID=g1058.t1.exon9;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 8147 8445 . + 1 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . exon 8547 8839 . + . ID=g1058.t1.exon10;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . CDS 8547 8680 . + 2 ID=cds.g1058.t1;Parent=g1058.t1 NODE_866_length_16553_cov_42.2299 . three_prime_UTR 8681 8839 . + . ID=g1058.t1.utr3p1;Parent=g1058.t1 #PROT g1058.t2 g1058 QECHDLEQRYIHCSTELSRKSEELSLARQDVVAKESRIELLSVQLREVDAQLAEKAAALERSSGTAVSFSEEREQLLASIERKNEELDRLSEDIKASAERAAEATHKHREALALVDDMHASEMSAKYREQRLEQERDMARSQVTWCEAELKAKSEELLAFRRDKSSQVIELQAALDEKAAEAARAVDQTADLRQRLANAETQTESLQHKLKEVREQLSQSEEQFRAEVATQTRLATLYRSAADEAKGRITQLTGAVEELRRLSEGARGEVDAAENRAAAEAAQSAKEREALQERIEALERQLARANELLAAAGLGTEGGFGDIRGARGQPLGVGALSSTAAAAAQLLRDGMTLTEMYAKLADTTDHLQTERDENRRLNGYLQQILREIEEKAPALHRQRIEYERAVQTVAQLTERMDTAVRECDRFGRESAAARAEASQLRRDKERLEQKAEDLGRQVQLLLRECEAARGTRFTAEDDGAVGSAGGAMDAAGIIGDRLVTFRSLAELQQRNAELLELVRTLGADREREERALAVDASKELERRLESASRELDEMRDARARQQEMVGAIVRQRDMYRVLLVQATGVDPATGSTAAATPAGFLGGSAGVSSVANATATAAAESGTDGRPRAGPEGQASGGVTTESREFLAELRAEFEFYRREREENEKVSQEASETVRVEASELRLKCARLEQQVEHAEERLKNSAAAAAAQMKELGALRTKNSEFAASVVEHQRTIERATAELIGSREEVRKAEVALANLRAEKDILRASEERLHREVSDLTQEKARQGQLLVALQTMQNTIEKSDAEGRRRLAATVEMLERECAVLRKRADSAVEEARAARVHLDAAVADVRSQLEGEVRAHHADKELLVRAQCAEEAAVERARQLEARLEASERRLNVLLQQRAAPHDDVSAAHAHQQQSIVADAQQSDGRRVGDEVNELTREVESLREQLASARQHVAQFKAISAANEEALKDLNKVSSEYREAMEAAAARAAAEVDSLRRQLEGTRQSQSESASELTALHEQIEAGTRAHATETAEMRARLAELEALCAAMLVRETSLKEEADTLRQTAADAQDRYERELMVHASDVQALSQLKTHVADIEQRRRSAVSESESLGAELRAREASWAERERLLAAEVARLEERVKELQRQNELIHSQLESVTAQASRIQQSATDAQVSSVGDAAASGDRTVDELRELVRYLRREKEIASCQLELAQQEAARMKQNSDHAARQLDELRAMLAQERAKAPMFAQTAQQQAELFEKIGQLNVLRESNVTLREESERNIALRKALEAKVAELESQISPLQEEKRKLTAAREAAFTENKASQNEIARWKQRAKQLADKSQRADPDELAAANARADQAAEQCKALTAEVARLTAEIDRVTAEMAAAKQASDARVTELETRVVRITDAGKRFRAEAVKHHKRATELESAAAALAAGGTGAPIHAVPPGGASAEERLQLEQRIADMTAAAKDTADTAAKEKEDAVRGLTEQNTNLTNKNAKLMQLLTNYKEKVTALKLENGRLKDEAEAARLAEERIAAVRVEHEGRERQLEARIAELSASSVQQHQQLQQQQQRPAAGKLKRQREEDDGEEGGPSAPPATQAGDGSGAPGVLGVPKKARLERVEAQTASAAQQPAQYISQHAHAAESLESASEAAMDAAAEQGEALPAQETIAVGESVPDVPMAMEGEGESAHVAEVPIDEAADSGDAPVAPGGHGVTPAGGSAPAPHAPSPAPTPAPLPRTPTVAAHTLGARGAAVAGRPSPLSARGSAAAGRARRGRPSVPAPFTLTHSMSFTADEDSAVPSTPTLALPQRTDAVVFEALNDVDMAGESRDVGADIVPADSPLPSEDVHQHVAADVSIGEPVPDSGAPVVGVLDAAVPVSSPPASPPPAEEPADDAAASSQTADFAGTAEDERGDAGAMDDVPEQAAEIEDGEGEASRDFANEVQPPEPADDGELQAQDDGEGEGAGDVPQTQEAEHPPEPPQGDSDQAQHAGTQRPTIISLRRTVAAAAAPAAVAPRAVASGGGAATAGESSAAGSPVAQGGRGNKLIRSALRGAMAAAHQGGQRGAGSPRAGVRGVRGNRGARGRAQNPHNAGAGRGSA* #PROT g1058.t1 g1058 QECHDLEQRYIHCSTELSRKSEELSLARQDVVAKESRIELLSVQLREVDAQLAEKAAALERSSGTAVSFSEEREQLLASIERKNEELDRLSEDIKASAERAAEATHKHREALALVDDMHASEMSAKYREQRLEQERDMARSQVTWCEAELKAKSEELLAFRRDKSSQVIELQAALDEKAAEAARAVDQTADLRQRLANAETQTESLQHKLKEVREQLSQSEEQFRAEVATQTRLATLYRSAADEAKGRITQLTGAVEELRRLSEGARGEVDAAENRAAAEAAQSAKEREALQERIEALERQLARANELLAAAGLGTEGGFGDIRGARGQPLGVGALSSTAAAAAQLLRDGMTLTEMYAKLADTTDHLQTERDENRRLNGYLQQILREIEEKAPALHRQRIEYERAVQTVAQLTERMDTAVRECDRFGRESAAARAEASQLRRDKERLEQKAEDLGRQVQLLLRECEAARGTRFTAEDDGAVGSAGGAMDAAGIIGDRLVTFRSLAELQQRNAELLELVRTLGADREREERALAVDASKELERRLESASRELDEMRDARARQQEMVGAIVRQRDMYRVLLVQATGVDPATGSTAAATPAGFLGGSAGVSSVANATATAAAESGTDGRPRAGPEGQASGGVTTESREFLAELRAEFEFYRREREENEKVSQEASETVRVEASELRLKCARLEQQVEHAEERLKNSAAAAAAQMKELGALRTKNSEFAASVVEHQRTIERATAELIGSREEVRKAEVALANLRAEKDILRASEERLHREVSDLTQEKARQGQLLVALQTMQNTIEKSDAEGRRRLAATVEMLERECAVLRKRADSAVEEARAARVHLDAAVADVRSQLEGEVRAHHADKELLVRAQCAEEAAVERARQLEARLEASERRLNVLLQQRAAPHDDVSAAHAHQQQSIVADAQQSDGRRVGDEVNELTREVESLREQLASARQHVAQFKAISAANEEALKDLNKVSSEYREAMEAAAARAAAEVDSLRRQLEGTRQSQSESASELTALHEQIEAGTRAHATETAEMRARLAELEALCAAMLVRETSLKEEADTLRQTAADAQDRYERELMVHASDVQALSQLKTHVADIEQRRRSAVSESESLGAELRAREASWAERERLLAAEVARLEERVKELQRQNELIHSQLESVTAQASRIQQSATDAQVSSVGDAAASGDRTVDELRELVRYLRREKEIASCQLELAQQEAARMKQNSDHAARQLDELRAMLAQERAKAPMFAQTAQQQAELFEKIGQLNVLRESNVTLREESERNIALRKALEAKVAELESQISPLQEEKRKLTAAREAAFTENKASQNEIARWKQRAKQLADKSQRADPDELAAANARADQAAEQCKALTAEVARLTAEIDRVTAEMAAAKQASDARVTELETRVVRITDAGKRFRAEAVKHHKRATELESAAAALAAGGTGAPIHAVPPGGASAEERLQLEQRIADMTAAAKDTADTAAKEKEDAVRGLTEQNTNLTNKNAKLMQLLTNYKEKVTALKLENGRLKDEAEAARLAEERIAAVRVEHEGRERQLEARIAELSASSVQQHQQLQQQQQRPAAGKLKRQREEDDGEEGGPSAPPATQAGDGSGAPGVLGVPKKARLERVEAQTASAAQQPAQYISQHAHAAESLESASEAAMDAAAEQGEALPAQETIAVGESVPDVPMAMEGEGESAHVAEVPIDEAADSGDAPVAPGGHGVTPAGGSAPAPHAPSPAPTPAPLPRTPTVAAHTLGARGAAVAGRPSPLSARGSAAAGRARRGRPSVPAPFTLTHSMSFTADEDSAVPSTPTLALPQRTDAVVFEALNDVDMAGESRDVGADIVPADSPLPSEDVHQHVAADVSIGEPVPDSGAPVVGVLDAAVPVSSPPASPPPAEEPADDAAASSQTADFAGTAEDERGDAGAMDDVPEQAEIEDGEGEASRDFANEVQPPEPADDGELQAQDDGEGEGAGDVPQTQEAEHPPEPPQGDSDQAQHAGTQRPTIISLRRTVAAAAAPAAVAPRAVASGGGAATAGESSAAGSPVAQGGRGNKLIRSALRGAMAAAHQGGQRGAGSPRAGVRGVRGNRGARGRAQNPHNAGAGRGSA* # PASA_UPDATE: g1060.t1, single gene model update, valid-1, status:[pasa:asmbl_9741,status:3], valid-1 # PASA_UPDATE: g1060.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_9742,status:12],[pasa:asmbl_9748,status:13], valid-1 NODE_866_length_16553_cov_42.2299 . gene 11190 12867 . + . ID=g1060;Name=g1060.t1 NODE_866_length_16553_cov_42.2299 . mRNA 11190 12867 . + . ID=g1060.t1;Parent=g1060;Name=g1060.t1 NODE_866_length_16553_cov_42.2299 . five_prime_UTR 11190 11543 . + . ID=g1060.t1.utr5p1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 11190 11587 . + . ID=g1060.t1.exon1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 11544 11587 . + 0 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 11687 11766 . + . ID=g1060.t1.exon2;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 11687 11766 . + 1 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 11867 11981 . + . ID=g1060.t1.exon3;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 11867 11981 . + 2 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 12155 12207 . + . ID=g1060.t1.exon4;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 12155 12207 . + 1 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 12337 12465 . + . ID=g1060.t1.exon5;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 12337 12465 . + 2 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . exon 12672 12867 . + . ID=g1060.t1.exon6;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . CDS 12672 12805 . + 2 ID=cds.g1060.t1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . three_prime_UTR 12806 12867 . + . ID=g1060.t1.utr3p1;Parent=g1060.t1 NODE_866_length_16553_cov_42.2299 . mRNA 11190 12867 . + . ID=g1060.t1.1.5b6be70c;Parent=g1060;Name=g1060.t1 NODE_866_length_16553_cov_42.2299 . five_prime_UTR 11190 11687 . + . ID=g1060.t1.1.5b6be70c.utr5p1;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . exon 11190 11766 . + . ID=g1060.t1.1.5b6be70c.exon1;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . CDS 11688 11766 . + 0 ID=cds.g1060.t1.1.5b6be70c;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . exon 11867 11981 . + . ID=g1060.t1.1.5b6be70c.exon2;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . CDS 11867 11981 . + 2 ID=cds.g1060.t1.1.5b6be70c;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . exon 12155 12207 . + . ID=g1060.t1.1.5b6be70c.exon3;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . CDS 12155 12207 . + 1 ID=cds.g1060.t1.1.5b6be70c;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . exon 12337 12465 . + . ID=g1060.t1.1.5b6be70c.exon4;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . CDS 12337 12465 . + 2 ID=cds.g1060.t1.1.5b6be70c;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . exon 12672 12867 . + . ID=g1060.t1.1.5b6be70c.exon5;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . CDS 12672 12805 . + 2 ID=cds.g1060.t1.1.5b6be70c;Parent=g1060.t1.1.5b6be70c NODE_866_length_16553_cov_42.2299 . three_prime_UTR 12806 12867 . + . ID=g1060.t1.1.5b6be70c.utr3p1;Parent=g1060.t1.1.5b6be70c #PROT g1060.t1 g1060 MSSPKRRIETDVMKLMMTDHQVTLVQDCMLEFYVKFHGPKDTPYEHGVWKVHVEIPEAYPYKSPSIGFMNKIFHPNIDELSGSVCLDVINQTWSPMFDLLNVFESFLPQLLLYPNPTDPLNGEAAALLMREPEAYKSKVRDYVQRFATEAALKEAENKGDDSSSESELSSLEDFSDDETKGMEL* #PROT g1060.t1.1.5b6be70c g1060 MMTDHQVTLVQDCMLEFYVKFHGPKDTPYEHGVWKVHVEIPEAYPYKSPSIGFMNKIFHPNIDELSGSVCLDVINQTWSPMFDLLNVFESFLPQLLLYPNPTDPLNGEAAALLMREPEAYKSKVRDYVQRFATEAALKEAENKGDDSSSESELSSLEDFSDDETKGMEL* # ORIGINAL: g1062.t1 original gene structure, not modified by PASA NODE_866_length_16553_cov_42.2299 AUGUSTUS gene 13758 15348 . - . ID=g1062;Name=g1062.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS mRNA 13758 15348 . - . ID=g1062.t1;Parent=g1062;Name=g1062.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS exon 15016 15348 . - . ID=g1062.t1.exon1;Parent=g1062.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS CDS 15016 15348 . - 0 ID=cds.g1062.t1;Parent=g1062.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS exon 13758 14912 . - . ID=g1062.t1.exon2;Parent=g1062.t1 NODE_866_length_16553_cov_42.2299 AUGUSTUS CDS 13758 14912 . - 0 ID=cds.g1062.t1;Parent=g1062.t1 #PROT g1062.t1 g1062 MKGTLRRRNSLAVIASATSMPVAHVCSLFMLSFALTLVVDPHVQHMVASSLFGATLTMTVTRHIGSFESEWRTGLANSNARYGAGMFQEPGASADPTPLSRYLATSKFRVELLHRFLRAPHSGLSRDHPELNSTIVHVVMGNGASDLDSVASAIAYAYNLDSVHRASQGDNRIIFAPVINLPLSDLALRTEVVHMLTRLSIDPSNLLFIDEAGMEALFYSARLRITLVDHNTLHADQNYLEPAVVEIIDHHEDAGRHSLASRDIAPVGSCCTLIAERMMRRSAACATCGLDATVAELLLGAVLIDTINLDATRGRSTERDASAALYLEAVSGADRSGLYESVRSAKFNVTGLTPREHLRRDYKEDVFAGLRFGVSAVSVSLGHLLSDAQAMLDHVVALKASRGLDALVVMTAHFAEDGCLVRGMLVFPGGPLAHRVFARFVESAHGADLELSPIEIPDALRHVQGVAALSQGNARASRKVVMPLLRRHIVAELGA* # PASA_UPDATE: g1061.t1, single gene model update, valid-1, status:[pasa:asmbl_9743,status:3], valid-1 NODE_866_length_16553_cov_42.2299 . gene 13024 13729 . + . ID=g1061;Name=g1061.t1 NODE_866_length_16553_cov_42.2299 . mRNA 13024 13729 . + . ID=g1061.t1;Parent=g1061;Name=g1061.t1 NODE_866_length_16553_cov_42.2299 . five_prime_UTR 13024 13086 . + . ID=g1061.t1.utr5p1;Parent=g1061.t1 NODE_866_length_16553_cov_42.2299 . exon 13024 13305 . + . ID=g1061.t1.exon1;Parent=g1061.t1 NODE_866_length_16553_cov_42.2299 . CDS 13087 13305 . + 0 ID=cds.g1061.t1;Parent=g1061.t1 NODE_866_length_16553_cov_42.2299 . exon 13427 13729 . + . ID=g1061.t1.exon2;Parent=g1061.t1 NODE_866_length_16553_cov_42.2299 . CDS 13427 13663 . + 0 ID=cds.g1061.t1;Parent=g1061.t1 NODE_866_length_16553_cov_42.2299 . three_prime_UTR 13664 13729 . + . ID=g1061.t1.utr3p1;Parent=g1061.t1 #PROT g1061.t1 g1061 MRSSKESVVCLFCRIISKRIPAAIVHESPRVLAFMDIAPLSEGHVLVVPKFCAQKLHEVPAEYLSELLPVAAKIAATLESSDYNILQNNGALAYQSVNHVHLHVIPKRDKDDGLVVRWKTMNATAQKLETLAEGIRKHLGNAADDSTPSQA* # PASA_UPDATE: g4300.t1, single gene model update, valid-1, status:[pasa:asmbl_4364,status:12],[pasa:asmbl_4365,status:12], valid-1 NODE_2460_length_6190_cov_35.7608 . gene 1822 4831 . - . ID=g4300;Name=g4300.t1 NODE_2460_length_6190_cov_35.7608 . mRNA 1822 4831 . - . ID=g4300.t1;Parent=g4300;Name=g4300.t1 NODE_2460_length_6190_cov_35.7608 . five_prime_UTR 4764 4831 . - . ID=g4300.t1.utr5p1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 4662 4831 . - . ID=g4300.t1.exon1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 4662 4763 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 4213 4300 . - . ID=g4300.t1.exon2;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 4213 4300 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 3885 3994 . - . ID=g4300.t1.exon3;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 3885 3994 . - 2 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 3589 3699 . - . ID=g4300.t1.exon4;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 3589 3699 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 3315 3422 . - . ID=g4300.t1.exon5;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 3315 3422 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 2172 2456 . - . ID=g4300.t1.exon6;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 2172 2456 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . exon 1822 1965 . - . ID=g4300.t1.exon7;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . CDS 1903 1965 . - 0 ID=cds.g4300.t1;Parent=g4300.t1 NODE_2460_length_6190_cov_35.7608 . three_prime_UTR 1822 1902 . - . ID=g4300.t1.utr3p1;Parent=g4300.t1 #PROT g4300.t1 g4300 MAQPARDHKVALVTGITGQDGSYLTELLLDKGYEVHGIIRRSSSFNTGRIQHLYDNPSAHQAKRLKLHYGDLTDSSNLVKIVNDVKPDEIYNLAAQSHVKVSFDLAEYTAETDAIGTLRILDAIRIAGLTKTCRFYQASTSELYGKVAETPQKETTPFYPRSPYGASGCLLSVGMWLMLQQDKPDDFVLATGETHKVREYVEKAFKVIGVTIAWEGAAEQEVGRDASTGKVRVRVDPKYYRPAEVELLLGDPTKAKQTLGWTHKVSFDNLVTEMVLADIELFRRNPNA* # ORIGINAL: g4299.t1 original gene structure, not modified by PASA NODE_2460_length_6190_cov_35.7608 AUGUSTUS gene 109 1169 . + . ID=g4299;Name=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS mRNA 109 1169 . + . ID=g4299.t1;Parent=g4299;Name=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS exon 109 213 . + . ID=g4299.t1.exon1;Parent=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS CDS 109 213 . + 0 ID=cds.g4299.t1;Parent=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS exon 547 702 . + . ID=g4299.t1.exon2;Parent=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS CDS 547 702 . + 0 ID=cds.g4299.t1;Parent=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS exon 978 1169 . + . ID=g4299.t1.exon3;Parent=g4299.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS CDS 978 1169 . + 0 ID=cds.g4299.t1;Parent=g4299.t1 #PROT g4299.t1 g4299 MAHQWIPFCVSTPLQEAVARSLVNAVKLKYIPHIKYVMQKKRDRLAQGLDAAGLEPIIPHGGYFVVANTSSIAQRAHAEKTEDVRDGDADDVITCKWLTKVAGVTPIPPSAFYSLPHKHAVAALARFAFCKRDDRIDEACKRLTKLKKID* # ORIGINAL: g4301.t1 original gene structure, not modified by PASA NODE_2460_length_6190_cov_35.7608 AUGUSTUS gene 5593 5829 . + . ID=g4301;Name=g4301.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS mRNA 5593 5829 . + . ID=g4301.t1;Parent=g4301;Name=g4301.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS exon 5593 5829 . + . ID=g4301.t1.exon1;Parent=g4301.t1 NODE_2460_length_6190_cov_35.7608 AUGUSTUS CDS 5593 5829 . + 0 ID=cds.g4301.t1;Parent=g4301.t1 #PROT g4301.t1 g4301 MATDGAEWKTAIAAEWKRRFPEPVPNQTATHFPLIERTFDEVEIIRMIEVFLSGQLTMRDRVKEFEEAFAKYIGAPVG* # ORIGINAL: g127.t1 original gene structure, not modified by PASA NODE_2235_length_7122_cov_40.1486 AUGUSTUS gene 4035 6612 . - . ID=g127;Name=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS mRNA 4035 6612 . - . ID=g127.t1;Parent=g127;Name=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 6575 6612 . - . ID=g127.t1.exon1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 6575 6612 . - 0 ID=cds.g127.t1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 6298 6385 . - . ID=g127.t1.exon2;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 6298 6385 . - 1 ID=cds.g127.t1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 5880 5985 . - . ID=g127.t1.exon3;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 5880 5985 . - 0 ID=cds.g127.t1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 5395 5534 . - . ID=g127.t1.exon4;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 5395 5534 . - 2 ID=cds.g127.t1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 4392 5136 . - . ID=g127.t1.exon5;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 4392 5136 . - 0 ID=cds.g127.t1;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 4035 4186 . - . ID=g127.t1.exon6;Parent=g127.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 4035 4186 . - 2 ID=cds.g127.t1;Parent=g127.t1 #PROT g127.t1 g127 MSVERFVAQIGKNGSAVPVSSIAPPAEGTSSTSAQGTTMRKALSPMDIPLRDIMAHLARLRNAIDGDATDARSVLHEDAAHTVPIESMGNYEDLLRKRQTLRSVVDDDDLRALSTVGSPRRRGGDTVMIDEADLGSGGSTPEAGGGAQTPPLRLKRRRIGSRSPSPAPLRRQGSTTQLALTLPPSQQYQQHQQLQLQQQQKQQQMQIGTINEDAMDAQAEEDKSLPPIAFTGESKSMDVEGLAMASDVVSKQDSPSELTDAPRPAQTDCGSAETTVNFSPESHILAPVPTPMNDGDRELPHVHLDDAQPNATAQLQEWHESLFSNESADSRGDTLYGVGASAGGSASAPFRSVASASEARAEAVALMRKPGKSYHEEILAIASRASSDDASRRALLRDFVEDARRYKKHLLVRVLEEAMGPS* # ORIGINAL: g126.t1 original gene structure, not modified by PASA NODE_2235_length_7122_cov_40.1486 AUGUSTUS gene 1180 3063 . + . ID=g126;Name=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS mRNA 1180 3063 . + . ID=g126.t1;Parent=g126;Name=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 1180 1393 . + . ID=g126.t1.exon1;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 1180 1393 . + 0 ID=cds.g126.t1;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 1608 2105 . + . ID=g126.t1.exon2;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 1608 2105 . + 2 ID=cds.g126.t1;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 2467 2568 . + . ID=g126.t1.exon3;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 2467 2568 . + 2 ID=cds.g126.t1;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS exon 2945 3063 . + . ID=g126.t1.exon4;Parent=g126.t1 NODE_2235_length_7122_cov_40.1486 AUGUSTUS CDS 2945 3063 . + 2 ID=cds.g126.t1;Parent=g126.t1 #PROT g126.t1 g126 MDLYAAHSNGSVRLRPPRKEDAPTIAQIFFDAFRDIYTRNNCTMTFTSADAAKYYFDNILLVYDKVVGAVAEVDGVVVASNFLWVEDVAGLGPISVSPAAQGKGVGAALVRWAVAEARGRGFESVRLTQDAFNAASYALYVSLGFDGADIFQRMKIAPSACTHVADVEGVCVRFGTDDDETECMAVCKRVNGFSRPLRHALGDKVPKAQRLRVAVRDGQIAGYAIGFNPGTHAVAVDDNTMKALLIHECRRKHAEGEMDELQVHIFGRLNPGLARWALTDFRMRLHKNMTYMVLGPRVDPAGVYFPNAIY* # PASA_UPDATE: g125.t1, single gene model update, valid-1, status:[pasa:asmbl_3845,status:12], valid-1 NODE_2235_length_7122_cov_40.1486 . gene 156 852 . + . ID=g125;Name=g125.t1 NODE_2235_length_7122_cov_40.1486 . mRNA 156 852 . + . ID=g125.t1;Parent=g125;Name=g125.t1 NODE_2235_length_7122_cov_40.1486 . five_prime_UTR 156 157 . + . ID=g125.t1.utr5p1;Parent=g125.t1 NODE_2235_length_7122_cov_40.1486 . exon 156 852 . + . ID=g125.t1.exon1;Parent=g125.t1 NODE_2235_length_7122_cov_40.1486 . CDS 158 352 . + 0 ID=cds.g125.t1;Parent=g125.t1;5_prime_partial=true NODE_2235_length_7122_cov_40.1486 . three_prime_UTR 353 852 . + . ID=g125.t1.utr3p1;Parent=g125.t1 #PROT g125.t1 g125 LRSLNPPLTIVRKTPEAPLTADDYLPSVMTCVNYLKLPDYSTKEVMAAKLRTAIHEGQNSFHLS* # PASA_UPDATE: g1567.t1, single gene model update, valid-1, status:[pasa:asmbl_3318,status:3], valid-1 NODE_2032_length_7998_cov_42.0468 . gene 1495 7998 . + . ID=g1567;Name=g1567.t1 NODE_2032_length_7998_cov_42.0468 . mRNA 1495 7998 . + . ID=g1567.t1;Parent=g1567;Name=g1567.t1 NODE_2032_length_7998_cov_42.0468 . five_prime_UTR 1495 1674 . + . ID=g1567.t1.utr5p1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 1495 2690 . + . ID=g1567.t1.exon1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 1675 2690 . + 0 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 2832 2860 . + . ID=g1567.t1.exon2;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 2832 2860 . + 1 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 3009 3016 . + . ID=g1567.t1.exon3;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 3009 3016 . + 2 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 3179 3312 . + . ID=g1567.t1.exon4;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 3179 3312 . + 0 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 3435 3556 . + . ID=g1567.t1.exon5;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 3435 3556 . + 1 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 3697 4391 . + . ID=g1567.t1.exon6;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 3697 4391 . + 2 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 4583 4967 . + . ID=g1567.t1.exon7;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 4583 4967 . + 0 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 5095 5397 . + . ID=g1567.t1.exon8;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 5095 5397 . + 2 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 5616 5749 . + . ID=g1567.t1.exon9;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 5616 5749 . + 2 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 5901 6529 . + . ID=g1567.t1.exon10;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 5901 6529 . + 0 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . exon 6688 7998 . + . ID=g1567.t1.exon11;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . CDS 6688 7831 . + 1 ID=cds.g1567.t1;Parent=g1567.t1 NODE_2032_length_7998_cov_42.0468 . three_prime_UTR 7832 7998 . + . ID=g1567.t1.utr3p1;Parent=g1567.t1 #PROT g1567.t1 g1567 MRTHCGQRPLGCASSLRSLRLAFVVLVTVGICYNIVPAHSATIFVSFVNGAASDASGCGRSVSTPCKTLPAAISEASEGDTVSIAGGGLSNACEGIIKRSIVIAASPMARIDCRGNAAALFIDGMVTSVEISGLSFYNGSAGLAGMADENSDNVAGAINVNTTGMRLFRVLNSEFLFNRADGLRAAGAILLTGSSLNGAFEIDIRNTLFDSNIANATLYACGGILSSQSDIKDGVYTFHGLKMTRNSGLAIAADGGAITGAAGGGAIVVNFETGVSENVLQLYENCDIRNNSGVAYGGYATDFSGNIGGGGVAVNWNSPISMMNAVKIVNTTIAYNYHWCDGYGINFGGTAGAGGFLINHNGFAYFLHVHIDGSLFDSNIGYIYGDAGSYSGNAGSGGMLVNYNSLGQDSLHECFNATFRGNYGLTGGVGGYLSSNGGGGGLEFYFISSESTRCRFYILNSVFERNTGVSTGTKLCSGAGGLSIFYYLRPKGVSNILIMRNCTFYKNIGRNEALSSNGMGSAFAISSYGASVHNGSYEISNTRFIGNYVSGRNNDYEGTVAVLIFSGGNENKIKMFDNVYEDNSSNRGAGTLAFVTTYGDGNTVTLIRERFVGNSAGGSGGALTTSPFFALRSNDCSFVNNSASTDGGAVSILSPDAVFTNTTFSGNVARVSGGAISVGSQSVATFNTCTISANTASTGGAISASKESIIQGTQSIFNLNRASSASEIFFGGSTMANLKYITINAVGLGSVIYAADGAAIAAVSYISQGNQLTCPKGFEFVSTDGGSVVGCSECPPGSYLLIGGTNRNLAKCHTCSGLVGAKCDAGGAHPRTTSGFWAHISQTDDPTLQFVQCPHGYCCHDETLGCELQFCVVGRTGRLCGDCLAGKSEVLGSTACRDNPDCNDARWFIPVVLLLVLAYAILLLRHPHGHSSPFKILVLHFQLVPLVTSYVGWAADVGIVTTVDNVFSLSMELFGVHKGICVFKGMNGVEKIATGVVIPLFLLSEIIICRVVTKVYQYLRRELDTTTSMNLRNLRASESFASAVMTLTLISYDTCLKTTFNLLSCVDVGGERYLFRSATGKTCFAGYQIGMFFFLAFILILPGLLVYFQYWCRARKKAGKTIKPAFRQVLHVVETPFRPGCKSWEAVLLYSRVFLVLFDVFIPNRLWRSMAVSMGMLFIFAINVSVRPFRSAEAHHLECYSLGLLVIMSVFNVRTGLLDNLGISARASLQLSTTHVYDFIELALLVAPLLYLAYKMTQYIYHVIKASMKQKKLRVWPSYFKSSLHHIGGIDGSKMVHGDGHDGGGNAFGMMLSDDDHGTLKKNVHVHKSTMQNIIEALQFDDLSPSESSASLAETKPNKINNAQSNGGIAEGASIATLPGSMPLVGKETESDNSANGERRTPGTGSSAEGIVAGSESHLRSEPTLNEEAVTAARSARNVEHTSRNDDVDLEYVPSPGESRSGSRQDLPLNARDKTVGASKTFLAAAAETATPTTDADGGGTEDHDEMVSELVVGLDQDGGAEESQPERPDES* # PASA_UPDATE: g12087.t1, single gene model update, valid-1, status:[pasa:asmbl_1133,status:3], valid-1 NODE_12_length_70433_cov_42.1945 . gene 37055 41880 . + . ID=g12087;Name=g12087.t1 NODE_12_length_70433_cov_42.1945 . mRNA 37055 41880 . + . ID=g12087.t1;Parent=g12087;Name=g12087.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 37055 37216 . + . ID=g12087.t1.utr5p1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 37055 37495 . + . ID=g12087.t1.exon1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 37217 37495 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 37618 38204 . + . ID=g12087.t1.exon2;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 37618 38204 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 38357 39044 . + . ID=g12087.t1.exon3;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 38357 39044 . + 1 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 39215 39781 . + . ID=g12087.t1.exon4;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 39215 39781 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 39972 40235 . + . ID=g12087.t1.exon5;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 39972 40235 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 40371 40745 . + . ID=g12087.t1.exon6;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 40371 40745 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 40889 41122 . + . ID=g12087.t1.exon7;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 40889 41122 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 41252 41467 . + . ID=g12087.t1.exon8;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 41252 41467 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . exon 41706 41880 . + . ID=g12087.t1.exon9;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . CDS 41706 41789 . + 0 ID=cds.g12087.t1;Parent=g12087.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 41790 41880 . + . ID=g12087.t1.utr3p1;Parent=g12087.t1 #PROT g12087.t1 g12087 MSAKAIREVDGKRMLATHLAAAGQPVSTRVAQVTKATDYDALVAANPWLQGTRLVAKPDQLIKRRGKLGLIKVNTDLDGAKQWIAERIGKDVSVGAASGVLDTFIIEPFVAHEATDEYYVCILSNPHSDEILFHHEGGVDIGDVDAKAVRLTVNVGQSLTADTVSANLLSKVPDVRRAKLAAFIAALYKVYVDLYFTYLEINPLVMVGDEVHVLDLAAKIDQTADFEAKTKWGGEIDFPPPFGREATPEEAYIRELDGKSGASLKLTILNRKGRIWTMVAGGGASVIYSDTICDLGFASEMANYGEYSGAPSESQTYEYAKTILELMTREKDPRGKRLIIGGGIANFTNVAATFKGIERALKEFQHLLIEHNIKIYVRRGGPNYQEGLRIMRDLGLSLGVPIEVYGPETHMTAIVAAALGIKEIDKDLLEEEAGVGESLMNMSQPRRKRSSIAIPKAVNGAIQQQAQQQATAADVKGAYTLFTRTTRAFVYGMQPRAVQGMLDFDSVCKRDTASVAGMIYPFSGNHSQKFYWGTKEIMIPVYKSMEEAMQRHPEADVMINFASFRSAYESTMETLQFPQIRVISIIAEGIPENKTRLMNKAAKEKGVWIIGPATVGGIKPGCFKIGNTGGMLDNIVSSRLYRPGSVAYVSRSGGMSNELNNIISRCTNGVYEGVAIGGDRYPGSTFIDHLLRFEDDPEVKMMVLLGEVGGTEEYLICEAIKNGRIKKPLIGWCIGTCADQFSSEVQFGHAGACANAMAETSSAKNLALKQAGAIVPDSFDSLGDTIGETYASLVKVGVIVERPEPDPPKVPIDYSWAQELGLIRKPASFVTSICDERGEELLYAGVPITAAFQEDIGIGGVVSLLWFKRRLPAYACKFIEMCLMVTADHGPAVSGAHNTIVTARAGKDLVSSLCSGLLTIGDRFGGALDDAAKQFSEAYDTGLSPQQFVDAMRKQHQLIMGVGHRIKSISNPDMRVNIIRDFCRKNFDSTPLLDFACQVELITTSKKPNLILNVDGCIAVCMVDLLRTSGCFTLEEANEYLQMGFLNGLFVLGRTVGFIGHYLDQKRLKQGLYRHPWDDISYVLPETQYTQGAAAPQ* # PASA_UPDATE: g12083.t1, single gene model update, valid-1, status:[pasa:asmbl_1136,status:12], valid-1 NODE_12_length_70433_cov_42.1945 . gene 23039 24099 . - . ID=g12083;Name=g12083.t1 NODE_12_length_70433_cov_42.1945 . mRNA 23039 24099 . - . ID=g12083.t1;Parent=g12083;Name=g12083.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 24083 24099 . - . ID=g12083.t1.utr5p1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . exon 24029 24099 . - . ID=g12083.t1.exon1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . CDS 24029 24082 . - 0 ID=cds.g12083.t1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . exon 23888 23945 . - . ID=g12083.t1.exon2;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . CDS 23888 23945 . - 0 ID=cds.g12083.t1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . exon 23611 23690 . - . ID=g12083.t1.exon3;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . CDS 23611 23690 . - 2 ID=cds.g12083.t1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . exon 23039 23442 . - . ID=g12083.t1.exon4;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . CDS 23365 23442 . - 0 ID=cds.g12083.t1;Parent=g12083.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 23039 23364 . - . ID=g12083.t1.utr3p1;Parent=g12083.t1 #PROT g12083.t1 g12083 MSGATVRRIPANALNLKEFIRRQTVLSLYRDMMRSLKGMESQSKRELRTFIREDFEKNRTERDEAVVKMLIARGQLSLKELRAAVGLAR* # ORIGINAL: g12092.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 64119 67050 . + . ID=g12092;Name=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 64119 67050 . + . ID=g12092.t1;Parent=g12092;Name=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 64119 64405 . + . ID=g12092.t1.exon1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 64119 64405 . + 0 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 64621 64856 . + . ID=g12092.t1.exon2;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 64621 64856 . + 1 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 65066 65248 . + . ID=g12092.t1.exon3;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 65066 65248 . + 2 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 65458 65591 . + . ID=g12092.t1.exon4;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 65458 65591 . + 2 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 65849 66007 . + . ID=g12092.t1.exon5;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 65849 66007 . + 0 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 66249 66340 . + . ID=g12092.t1.exon6;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 66249 66340 . + 0 ID=cds.g12092.t1;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 66552 67050 . + . ID=g12092.t1.exon7;Parent=g12092.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 66552 67050 . + 1 ID=cds.g12092.t1;Parent=g12092.t1 #PROT g12092.t1 g12092 MAAMNVLPAINGTRNTRTGFAPANKAQTVPKASTTTTQLLNGRSGSKTPDAASAAGSPLRTRGGRRRDDPLSQSQPNGQSQGRAQSALGMTDAAAGRSGRRQEICLQMLVDGYPESYQEFFRLTHPKDVPRTVEGENAPTGSADDAEELPFVIPEDDLDVVRDRLVDAEEAKRIGDILSVYRAQETLGKYFEDAGSFSTAFRFRQNCLAIAELAADNGRLLGEANRNMGVAFMRQGKIADAVRYLESYYGLVVERNDTDTALLVDAGKQLISAFTHAAERLEHSENTWDEAIERYRRCLDIAESIHDPSSLASSTFRLGKALERSGDSQAAVVHHENYYNMCVSAKDDQGEGQACIALASAHKALGDLDTAMGYLEKFIVLAERTSQQEAAAEACNQLGSICTTLGRREKAVEWFGKCYQIMRASNNGDGLHMAKVQYGIARANLLIGTYKDCVQSVDPRDLVRLLTWKNIRVQSFVAEDIAQGDISAQNAFGTVPKTPSISALAAATSSSNVSSGGVLTAQNSAYYSS* # ORIGINAL: g12086.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 33740 34975 . - . ID=g12086;Name=g12086.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 33740 34975 . - . ID=g12086.t1;Parent=g12086;Name=g12086.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 33740 34975 . - . ID=g12086.t1.exon1;Parent=g12086.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 33740 34975 . - 0 ID=cds.g12086.t1;Parent=g12086.t1 #PROT g12086.t1 g12086 MASFLSVPVEVLITHVIPFLANGDVVALARVNSFLRYLCLFTLRQKIVAKFYKNKTFRCDVLSLIPKGRLVIDFACMKYVGDVSALGGVHSLNLRNCSGVVDVSALGSVHTLNLFWCSGVADVSALGGLHSLNLSCCGLVADVSALGRLHTLDLSWCNGVVDVTALGSVHTLIISYCERVVDVTALGGVHTLDLNNCNGVTDVSALGRVHSLNLNGCSRVVDVSALGGVHTLDLSNCAGVKDVSALVGVHTLNLSGYRGAIDVSAFGHVHNLNLSGCNQVMDVSALGGVHTLNLSTCYELEDVSALGGVHTLNLSWCIGVVDVSALGSVHTLELRECGVVDVSALGGVHTLYVCGCSGVVDVSALGGVHTLDLSDCTGVVDVSALGGVHTFSVAAMACRIYLHCVVSTGLP* # PASA_UPDATE: g12078.t1, single gene model update, valid-1, status:[pasa:asmbl_1134,status:12], valid-1 NODE_12_length_70433_cov_42.1945 . gene 77 2417 . - . ID=g12078;Name=g12078.t1 NODE_12_length_70433_cov_42.1945 . mRNA 77 2417 . - . ID=g12078.t1;Parent=g12078;Name=g12078.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 2325 2417 . - . ID=g12078.t1.utr5p1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 2084 2417 . - . ID=g12078.t1.exon1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 2084 2324 . - 0 ID=cds.g12078.t1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 1741 1872 . - . ID=g12078.t1.exon2;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 1741 1872 . - 2 ID=cds.g12078.t1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 1524 1574 . - . ID=g12078.t1.exon3;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 1524 1574 . - 2 ID=cds.g12078.t1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 1013 1139 . - . ID=g12078.t1.exon4;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 1013 1139 . - 2 ID=cds.g12078.t1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 432 640 . - . ID=g12078.t1.exon5;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 432 640 . - 1 ID=cds.g12078.t1;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . exon 77 107 . - . ID=g12078.t1.exon6;Parent=g12078.t1 NODE_12_length_70433_cov_42.1945 . CDS 77 107 . - 2 ID=cds.g12078.t1;Parent=g12078.t1;3_prime_partial=true #PROT g12078.t1 g12078 MRSEFVVVAVLAVVLVACCGHVDAGCLKRKHPAIEEHVVSKPAHELLAGKHIPTHWDWRNVSGVNYVSPDRNQHIPVYCGDCYAACSTSALSDRINIFRRNAWPSVMVSIQNALACNKHADGCDGGDEITVYRYSHESGIPDETCNNYRAISQQCTNMTQCSSCWPDACFAIPEHRRWFVKEYGYVSGEEKMMAEIYARGPITCGVMDSDEFMNYTGGIYSVYMENVNVKDFDHCVSIAGFGEENGIKYWIGRNSWGVAYGES # PASA_UPDATE: g12085.t1, single gene model update, valid-1, status:[pasa:asmbl_1137,status:12], valid-1 NODE_12_length_70433_cov_42.1945 . gene 30612 32466 . - . ID=g12085;Name=g12085.t1 NODE_12_length_70433_cov_42.1945 . mRNA 30612 32466 . - . ID=g12085.t1;Parent=g12085;Name=g12085.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 32406 32466 . - . ID=g12085.t1.utr5p1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . exon 32394 32466 . - . ID=g12085.t1.exon1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . CDS 32394 32405 . - 0 ID=cds.g12085.t1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . exon 31858 32014 . - . ID=g12085.t1.exon2;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . CDS 31858 32014 . - 0 ID=cds.g12085.t1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . exon 31207 31556 . - . ID=g12085.t1.exon3;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . CDS 31207 31556 . - 2 ID=cds.g12085.t1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . exon 30612 30910 . - . ID=g12085.t1.exon4;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . CDS 30833 30910 . - 0 ID=cds.g12085.t1;Parent=g12085.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 30612 30832 . - . ID=g12085.t1.utr3p1;Parent=g12085.t1 #PROT g12085.t1 g12085 MAAQTEGDETKKQNVMRDLHIEKLCLNICVGESGDRLTRAAKVLEQLAGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILERGLKVKEYELRRGNFSASGNFGFGIQEHIDLGIKYDPSIGIYGMNFYVVMGRPGNAVTRRRRAPSRVGKKHRVTRDETQKWFQQKYDGILLAGAAPGSEEKKSNYKGKKK* # ORIGINAL: g12093.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 67709 70300 . - . ID=g12093;Name=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 67709 70300 . - . ID=g12093.t1;Parent=g12093;Name=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 70086 70300 . - . ID=g12093.t1.exon1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 70086 70300 . - 2 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 69811 69919 . - . ID=g12093.t1.exon2;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 69811 69919 . - 0 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 69518 69562 . - . ID=g12093.t1.exon3;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 69518 69562 . - 2 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 69335 69397 . - . ID=g12093.t1.exon4;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 69335 69397 . - 2 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 68874 69106 . - . ID=g12093.t1.exon5;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 68874 69106 . - 2 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 68408 68550 . - . ID=g12093.t1.exon6;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 68408 68550 . - 0 ID=cds.g12093.t1;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 67709 68168 . - . ID=g12093.t1.exon7;Parent=g12093.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 67709 68168 . - 1 ID=cds.g12093.t1;Parent=g12093.t1 #PROT g12093.t1 g12093 DLLSREDGGVAVVVGNAVVDLDVYRKTATLADGRKIGFEKCLIATGGRPRSLPLLAGASDDVLSRITLFRKIAEFRSLDKITDSARAIAIIGGGFLGSELACALAHKASTTGARVIQFFPEEGNMGKIFPKYLSEWTTNKVRDANVDVRTQTIVKNIESAGADGVRVITESGDSILVDHVVVAVGIEPNVELARRAGLEIDRTHGGIVVNAEMEARSGVWAAGDVSCFHDIALGRRRVEHHDHAVVSGRLAGENMTGKRRPYTHQSMFWSDLGPKVGYEAIGVIDSTLPTIGVWARASSKDTPKEATAQGDNIRAAGGDSNASAAVHADTKPGDVQGSATTDGAHATPAPTDAPASTAPDAAHPDEYSKGVVFYMRDKKVVGVLLWNLFNRIPTARKILKSDREYEDVVELAKLLNVHGEH* # PASA_UPDATE: g12081.t1, single gene model update, valid-1, status:[pasa:asmbl_1135,status:3], valid-1 NODE_12_length_70433_cov_42.1945 . gene 18324 20347 . - . ID=g12081;Name=g12081.t1 NODE_12_length_70433_cov_42.1945 . mRNA 18324 20347 . - . ID=g12081.t1;Parent=g12081;Name=g12081.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 20318 20347 . - . ID=g12081.t1.utr5p1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 20104 20347 . - . ID=g12081.t1.exon1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 20104 20317 . - 0 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 19849 19998 . - . ID=g12081.t1.exon2;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 19849 19998 . - 2 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 19601 19707 . - . ID=g12081.t1.exon3;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 19601 19707 . - 2 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 19328 19419 . - . ID=g12081.t1.exon4;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 19328 19419 . - 0 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 18791 18950 . - . ID=g12081.t1.exon5;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 18791 18950 . - 1 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . exon 18324 18646 . - . ID=g12081.t1.exon6;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . CDS 18566 18646 . - 0 ID=cds.g12081.t1;Parent=g12081.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 18324 18565 . - . ID=g12081.t1.utr3p1;Parent=g12081.t1 #PROT g12081.t1 g12081 MLRLGTRAISGALRVQRCAVSGGHLHHLAAARLASPSLVLAQTCTSKTTFAAANPAVFVYRGYAKKSSAKAGKGKAVEEDDEAEEIDLDALLDTDTAKGLMDASIDHLKKEFSRLRTRIGPGLLENVKVNGNAPLKSLAQIMTKDAFSLHVNVFEAHDVDAVETAIRDAGLNLSTARDGKLIKATQPKTTMEHRQTLARTAKDLGEQCKATIKRARQKAIDTAKKASKHVSEDDIKRFEKAVQALTDASNKHVDDLVVTKSKEIMTI* # ORIGINAL: g12084.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 24613 30052 . + . ID=g12084;Name=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 24613 30052 . + . ID=g12084.t1;Parent=g12084;Name=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 24613 24762 . + . ID=g12084.t1.exon1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 24613 24762 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 24854 24991 . + . ID=g12084.t1.exon2;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 24854 24991 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 25130 25225 . + . ID=g12084.t1.exon3;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 25130 25225 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 25486 25882 . + . ID=g12084.t1.exon4;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 25486 25882 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 26048 26164 . + . ID=g12084.t1.exon5;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 26048 26164 . + 2 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 26363 27244 . + . ID=g12084.t1.exon6;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 26363 27244 . + 2 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 27528 28153 . + . ID=g12084.t1.exon7;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 27528 28153 . + 2 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 28311 28428 . + . ID=g12084.t1.exon8;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 28311 28428 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 28647 29140 . + . ID=g12084.t1.exon9;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 28647 29140 . + 2 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 29273 29492 . + . ID=g12084.t1.exon10;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 29273 29492 . + 0 ID=cds.g12084.t1;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 29658 30052 . + . ID=g12084.t1.exon11;Parent=g12084.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 29658 30052 . + 2 ID=cds.g12084.t1;Parent=g12084.t1 #PROT g12084.t1 g12084 MKGIAVVILVAALCVLFVDANHQHASRSSLEIGQKCIINDGADVRKSGPQDEDIAFCTMWKDNSCCRDGVTDEIESSNFDVLHGANWTACGAVSNKCLDYLKHLSCFEECSPYLAPWATGDATAPFAKVPVCATWAEQWFDACKDDSTCATNWRNQSQWTGSTDTSTRGCAAGAGACKSFGSVFPNAKSLLENLLGNSYTFVSDSTKCFKPWFVGDNTNGRVYHTAIASKTIPARTLTTAPSTRLPKSVSIDIRSPERLSGRAAVGSLGTYVAAVYVSASSSVFVADASNNIVDVLDAANLSSTLQSIDTTILVGSFSGSPFAIDAYGSVVAVALVPSTQTDDGVLVLINANTYAVLSSVPIGALPRKVTFTPDGNRILVANEGAASYSGDTVLVDPLGTVSIIDLFASAPAVGTVRSSADVLSAAAALTSASVRTVNFTSLAGVRIDNGVELGLAHNNSGKDIEPTFVVVSDDSTTAYVTCTSNNAAAVLDIDNGVVLRIMTFGSKDHLFPTNGIDATSGDGVTITNVPVRGLFQPTEGKVAYIDGKPYFITANGGGGHDGDYVALGTASVVLNSAVFRDADGLKAAYPGLKVHKRLGKSGSKYSELYTSGARSFAAWTAEGERLFDSGDEFERAIGWKSASAYNVANGVSDATSTFRGCQPGTIAVGRVGDRLYTFIGLTNCDGFFVYDVSDLTRVRFVQHVSTGGATGPSSLTFYTDAAGKPILLATFSYADNGRAAIFDINTLLTPIVEPTVKATSWSMRPPVPTARSDLTSTTIGDKIYVAGGCITDSTDGGDVCNKITNVLEVFDPLTGEWDVDVKPMPTARFRHTATAWAGKLIVMGGRLADDSALDSVEIYDPLTDDWTTLASLPVAVSDLASATIGDRVFAFGGWEATYAGTYNKTWEYNPLTNTWSVVNGAVLANGKGRGDFEATVLAGKVYAFGGYSISFGADWGDVVLSGELEVFDPETNKWSTDATMRMHFPRADKGCAALNNKIYLIAGETKIGASPYDWVSEAVADVEIYDPFTGEFTVAAEIPSVRMRTSAAAHGSSVYVFGGHSNTKAVQNLAEVLTIGDNAKPAIAIEQLRTDLRGVHAYVAARSDDKGRLANAARIADVEKRVSTVESQVGTSPPPVDAEDGDDDTKDIAIAALVIAVIALVGLIPISLAVQRVAFNRWMNQHNQKYKGDVGMAPYGNIDSRKNSVVANDP* # ORIGINAL: g12082.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 20750 22774 . + . ID=g12082;Name=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 20750 22774 . + . ID=g12082.t1;Parent=g12082;Name=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 20750 20872 . + . ID=g12082.t1.exon1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 20750 20872 . + 0 ID=cds.g12082.t1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 21120 21190 . + . ID=g12082.t1.exon2;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 21120 21190 . + 0 ID=cds.g12082.t1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 21404 21530 . + . ID=g12082.t1.exon3;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 21404 21530 . + 1 ID=cds.g12082.t1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 21786 21859 . + . ID=g12082.t1.exon4;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 21786 21859 . + 0 ID=cds.g12082.t1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 22212 22305 . + . ID=g12082.t1.exon5;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 22212 22305 . + 1 ID=cds.g12082.t1;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 22493 22774 . + . ID=g12082.t1.exon6;Parent=g12082.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 22493 22774 . + 0 ID=cds.g12082.t1;Parent=g12082.t1 #PROT g12082.t1 g12082 MATRLYVGRISRSTRTRDVERLCDRYGRLREVTMKDGFCFVEYYDDRDAHDAVRDLHGRDFMGDRLIVEYARGAGSHGAPRQERRGPLRRTDHAVIVENLSTRASWQDLKDFMREAGEVIYVDAHQPRDGEGVVEFATADDMKNAIRKLDDTEFKGKRIRITEQPRRARSRSRSRSPRRRSSQSPAARERSPARERTRSPARERSPVRERSRSPAPDRSPPKEDAHDDGPADAEDDAPADDRRDDRDISERAEDDS* # PASA_UPDATE: g12088.t1, single gene model update, valid-1, status:[pasa:asmbl_1139,status:12],[pasa:asmbl_1140,status:12], valid-1 NODE_12_length_70433_cov_42.1945 . gene 42005 44136 . - . ID=g12088;Name=g12088.t1 NODE_12_length_70433_cov_42.1945 . mRNA 42005 44136 . - . ID=g12088.t1;Parent=g12088;Name=g12088.t1 NODE_12_length_70433_cov_42.1945 . five_prime_UTR 43427 44136 . - . ID=g12088.t1.utr5p1;Parent=g12088.t1 NODE_12_length_70433_cov_42.1945 . exon 42005 44136 . - . ID=g12088.t1.exon1;Parent=g12088.t1 NODE_12_length_70433_cov_42.1945 . CDS 42425 43426 . - 0 ID=cds.g12088.t1;Parent=g12088.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 42005 42424 . - . ID=g12088.t1.utr3p1;Parent=g12088.t1 #PROT g12088.t1 g12088 MWNSLDSDSQTPMWPPTAQDASVDPAMFLSGGMGTMFEQEELYDPFADLYNAPQADILASSVPQSPDFELAKLQAQATFMHHEQLARINAKAAALHTPLLSVAPAASVSSGGNGGGGGKVATGSRASAKESSKPYGTKKSHKSSTKHSVNTPVPGIAVAPAVHGLGSHLMAHAHQTQAHSQLHHTHQNQQQQQQQQQQQQLVVKRKGAGRPKFMGTASAADIRNETKLEKNRRSAKEARRKKKEYVRGLEDKVAQYAAARDAMEQRLIEVERRNADLVAELGRLRGMPSDSLLIGEAISADTSSRDDISFNLGRAIESDSCEVPATASELTPL* # PASA_UPDATE: g12079.t1, single gene model update, valid-1, status:[pasa:asmbl_1138,status:12], valid-1 NODE_12_length_70433_cov_42.1945 . gene 2708 3770 . + . ID=g12079;Name=g12079.t1 NODE_12_length_70433_cov_42.1945 . mRNA 2708 3770 . + . ID=g12079.t1;Parent=g12079;Name=g12079.t1 NODE_12_length_70433_cov_42.1945 . exon 2708 3770 . + . ID=g12079.t1.exon1;Parent=g12079.t1 NODE_12_length_70433_cov_42.1945 . CDS 2708 3649 . + 0 ID=cds.g12079.t1;Parent=g12079.t1 NODE_12_length_70433_cov_42.1945 . three_prime_UTR 3650 3770 . + . ID=g12079.t1.utr3p1;Parent=g12079.t1 #PROT g12079.t1 g12079 MAPEPDENDDNAVQRRLADALRRDDHATVSHIVDETPGIAINAVIAVTTGFTLLHALAKSGADESFVVKVIKRGAHALARTAECDGCRTPADVARDFGHDALAAAIDREVESRTFPVVRCAKCGWRLAGFRCRGSGCDAKLAAASDALEDDGERRLRCPRGHGCAALRCCGMPVEITGEMVTLSIDEILLAKDRSRFYGEPNLDCAVCKWSVGGYSCASCNEGNGSVLELRGFYERVWCTLVWKCPDNCGGDGGLIIGGGRQGFCLFCQCEQSTSQTPDDVQQTVGAEDDDHRGLSNLMSPIEFEKEYGAACN* # ORIGINAL: g12091.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 58185 62951 . - . ID=g12091;Name=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 58185 62951 . - . ID=g12091.t1;Parent=g12091;Name=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 62943 62951 . - . ID=g12091.t1.exon1;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 62943 62951 . - 0 ID=cds.g12091.t1;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 62529 62723 . - . ID=g12091.t1.exon2;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 62529 62723 . - 0 ID=cds.g12091.t1;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 62199 62366 . - . ID=g12091.t1.exon3;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 62199 62366 . - 0 ID=cds.g12091.t1;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 60434 62065 . - . ID=g12091.t1.exon4;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 60434 62065 . - 0 ID=cds.g12091.t1;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 58185 60098 . - . ID=g12091.t1.exon5;Parent=g12091.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 58185 60098 . - 0 ID=cds.g12091.t1;Parent=g12091.t1 #PROT g12091.t1 g12091 MTETASLLSAVLLVDGMTCMSCVNSIQNGCTKLPGLSSISVSLADKRATIAVDPALLSPEDVANAINEMGFDASVMSVVADDHVTVDLNDGAAHAERPPAQSISNKAILQVSKAGTSKSPIPKRMAPIPNGSLGDAHTPTESATFMVDGLTCDSSVASVEAAVVQLSGVESVRVSLLYATATVIFRPDRVDVAAIRSAIAGCGFDAILHRRGVTSESPVAASATIDLSDPPQLTRQRTFARGPSSAKLLVDDAGFQAVELGGDRADTKGDALSSSSTSSRRRSGGGDPQRSRSTSFTTATENSVSDGHSKKDSAVSVNVGGKEGLLCSSFTITGMTCASCVGSIERGLRGREGVSDVRIALIGGRGDVVHDPCIVSAEQLAEAIEDMGFGAQIVKNIPHGILHLSVGGMTCSSCVHSIETSLGKVRGIISASVALTPGSARVEYDPGVIGPRDVIGAIEGMGYTASLSREGDSGSSGHKDEELRMWRLMVYLSFAFAVPIMFITMVIPRFALGEKMLMSEVVSGLTSQNVILLLLATSAQLLVGWRFYRSAVLSLRHGSANMDVLIALGSTCSYMYSVFAVVYSVVIGNAAMAHAHSTFFETAPMLFSFVSLGRVLEHVAKGKTSEALTFLCQLKPPNAVLLTCDASGAVAKEEFIDSELVQRGDILKVVPGAKIPVDGVIVFGASMVDESMITGESVPTTKKIGDEVIGGTVSRNGMLHLRATRVGADTTLAQIVRLVENAQTSKAPIQRYADRMSARFVPAIITIAVVTFVVWIILTTTGTVSVPDMSTPFRHSLLFAISVLVIACPCALGLATPTAVMVGTGVGAKNGILIKGGEPLERAHRVTMVVFDKTGTLTAGKPQVTECRLFAEDGMTVSIGVGGEIIPDNPLECATEERAQSLNALRRRFFEIVGAAEECSEHPVGVAVAAFARAGLRALGNTRMQFPVPAQDFEAVPGCGIRCRVGTSVVLAGNRAWMERNRCVVPQQGDEELSALECEGKTGLFCAIDGAVVAVVAVMDVPKPSAAAAVCALKSMGIRVAMMTGDNKRTAATIAHTVGIDTVYAEVLPGQKADHVRELQEAGEVVAMVGDGINDSPALAQADVGIAIGSGTDIAMETADIVLIRDDLCDVPVAIDLSKKTVSRIRWNFAWATLYNIVGIPIAAGLLVPLGVTLHPMFASGAMAFSSVSVVLSSLLLRRYKRPPFMEEHEEGLERVPRKSVSELCAVLCADGPLIGAVACCMSSVMLVQLALQRLLRLCGIQLTNSSRGYAQLGVSRSRSIFDRSDDFEMQAAEMGEIDRGAMTE* # ORIGINAL: g12089.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 45515 51286 . - . ID=g12089;Name=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 45515 51286 . - . ID=g12089.t1;Parent=g12089;Name=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 50964 51286 . - . ID=g12089.t1.exon1;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 50964 51286 . - 0 ID=cds.g12089.t1;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 48905 50795 . - . ID=g12089.t1.exon2;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 48905 50795 . - 1 ID=cds.g12089.t1;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 45804 48830 . - . ID=g12089.t1.exon3;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 45804 48830 . - 0 ID=cds.g12089.t1;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 45515 45688 . - . ID=g12089.t1.exon4;Parent=g12089.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 45515 45688 . - 0 ID=cds.g12089.t1;Parent=g12089.t1 #PROT g12089.t1 g12089 MDLDIEMPDGHPQSALNYASAWSELRVEHRRRRQPSSAQSSPAAGNDEQGSPTSQGSAAASSTPQSEEWDTVQIYSGMDGVKQAAREVDGSAVGVAQQRERCRSLKYAMQFQRTKENSIYPSFYAAAVYHINTQEAHTAGENTTSRAVCIASLIEGVSAALQGVRNEFTLSPELHNDFVRKNGGDIAGPTTQSQVLLTTAGLAVYTRASGAPATWSVTVHMDAESWKFLFATIPVDTSPTEGPSPGALYIRSCEKVDWCGDKILAADSIERRTEYLLKAIAGNDNDAEEYNLISRLLVDVVGAIPAGIEKAVAGQSNGKASDGSCTVYGANNWDGRTFAVVRIRNKYAIWGKRPAGEMKQLTHLLSHPQASALVLWDDKFAIANHSDGGLTKAASKGQKKITDTFNDTPKVGGLTLVSEASGFKDYNALIESIRDIMPAFPRMNVYGARTVLKDDIPFDVNAFVRTFADVITQSSEYLRENADKEFEKLERSSQQRSAKWTEAFLSQINHFIDANYEEAEAAEKDAQVKVVKGIKENYVDKAKLKLGERNSLRDLYDSVKRASAGETPSKIDIIRLEAYERFCQQSATLAAINAFFLRTCVSFNLLQKEDILLDQVIGQQHKDEQKTLDTIRKNIGERLKTVFAGEESKTPGSSPSVQSFAWLTEDSAYASRFLPPINLLRTLWQAMDGFDVEVLQNRLAAGMCDAETDIISAVFQTLLDPSIDDLGRTARNVRTFGKVYTPRPLVHFVLRACGIDSSAEGPSNDVLADDIEHRLSQSDPTKYLTAVRSVLDPASGSGGFIATYAGIVVSKLRRCEAVWEDHDRLERAFEAIVDNVWGVEIDFVAWEISIINVLVQVLPVVRQLQVLREKRSTPGKKATPVIIPRFNILRENTLSLFSLEMKVDKKNTLRKEPKEQLRDYRKFDFVLGNPPYSTRKYSKAAFECIDDEYYKKKEERKSPWSVLADRSASLRHQNWNKQKGKAQLHLFFFLFGARHVKRGGKLGFIGPAAFVASESDLGFKQWLLTFVVPETIYYAPRYVFFEAQTDTIVMVCRPREDTNRPPMSAMFSVVRSPGSGIKDNAAYMQTNIKAVLKLWDEFRATRDDFLATAQRCGTKALITARYELSVIPASALIDSADPKPKESERDVMGDFRSPGWYDGSGDLPETRKMHQVEDGVELGKVATVGRGQSIGADHFFLFESAEKFAVDFRKVLTAMKDGKKMGDAATLAIYEGMPNTESSAKKLYTEFLTCTRAEQRLKPCHFDKDLRNHYAAVKDPGDILQCYSGELAAPQVGSVTRLYLEYIAIGLKDPRGLIKASKTKEGTVALAVARMMFAIKEVKGSSHAGAGKACTAKDGGKDYLTMTNQRNGFGFDRPYLLQAYFGYRRRDSRHRCIQFALVEDACIAKDNFVFVSANEDSPWTNLTLLGVLNSFPVEVFICRKLAKWKQADTFAIKNTRLPKLPLPPLKALEMENIEGITKLLVDMYVRLRTPAAKAKATKRKDLVMLRSAGALFCTEIASSGGLAGASSSLTFYEFLLGIDENTAVSDLIESVKAAEECLVKDKSADETAAGGDMSKPLAAFLGNRLTVREDVASEGDMTDRAEWLLSCFDEADLNSVVQAVAILDIASRLQALLDALVFAAYGFQSKEVANTWRLLGYTPPQTVRVHISRARAQVGATLKDQALDDVERMADHLSEAAQDYCKTGLFLGLSIGRNKNGFRSAEDLLSQAARIPTPQTATPAKPSPTAPRKEALSVRGTSSRKRKAAQARDAAARQQRRRLMTTVEKDDSMVVDEPSDIDKDNMSD* # ORIGINAL: g12080.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 14966 17961 . + . ID=g12080;Name=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 14966 17961 . + . ID=g12080.t1;Parent=g12080;Name=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 14966 15119 . + . ID=g12080.t1.exon1;Parent=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 14966 15119 . + 0 ID=cds.g12080.t1;Parent=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 15313 16796 . + . ID=g12080.t1.exon2;Parent=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 15313 16796 . + 2 ID=cds.g12080.t1;Parent=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 16873 17961 . + . ID=g12080.t1.exon3;Parent=g12080.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 16873 17961 . + 0 ID=cds.g12080.t1;Parent=g12080.t1 #PROT g12080.t1 g12080 MAVEWSQIAEEMMQSTWMPVSVLGALLVLLWRRENRPVIEANQAASDMMKDGLFQFNGDRPKDTVDGAVRRTHLRFPLVEKTSAYHYALRVPTAEELTFAAREHRVCLCNRPPRQRPDTVKCNGYSKVCGGYMHPVCFGLQLRPGALIEGLVCPACLIADDAYQHRIGPDVLRAHRMMIASVRVPDVNAAHSLTTGRTVPDMGHIVPVMYNARGMDDAARQTRGMPMTVDHARVVHHLPGALMQRPRASPMQAPMPEPPYGWSHPPAHPMYGQVGLVRPDAISAYGTHGDPMESSRIVRQDFSASTEGEALSMSQSFSRDPLRESQSCHSGMDTSAAGHQHALGGGAWRPAPARTPQVSDAQTPSNDSDREDDTRPSRRRTLADEDRATTHAEPLAKRARQLKDEEQRVHHSRSQGRHPASWWDVGMDGPAQSDPSLRNPTAQQWAGFVTAPPPHPASAAYGALPTHQYSRTEVFGKGMPVPGRIPGDAGYRPREYVEDPRVIAGYGGYYAQPGEMYHHPRHPMSTFPQRPSYPAHAAYYPSDMPWDRARGVGTEYRTKVTRCTMDRRGVGHGARVPVCGRIRPLMAILLLRMALCLHMRARVSMDLHMHTPMGPRIHTPMDPHMHTPMDRHVPMDPHMHTPMDVPMGPRMHTPMDRPVPMGPRMHTPMDHYVPMGPRMHTPMDRHVPVDPHMHTPMDRHVHSPMDRHVPMGLHVHSRMVPHMHMPMGPRMHTPMDXXXGPARAFADGPAHAYADGPAHAYADGPAHAYADGPSRADGPARAFADGPAHAYADGPSRADGPGPDGPALVDGPVHPPRASNITSDGDQARNDGNAPCSPRVTVVVNTIEPDGGPNAASSLKMETRGAGVKEVMDPFEMEPPSDGETNAPKQLNEPSTSPSRAKLVVNNP* # ORIGINAL: g12090.t1 original gene structure, not modified by PASA NODE_12_length_70433_cov_42.1945 AUGUSTUS gene 52114 57260 . + . ID=g12090;Name=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS mRNA 52114 57260 . + . ID=g12090.t1;Parent=g12090;Name=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 52114 55260 . + . ID=g12090.t1.exon1;Parent=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 52114 55260 . + 0 ID=cds.g12090.t1;Parent=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 55440 56249 . + . ID=g12090.t1.exon2;Parent=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 55440 56249 . + 0 ID=cds.g12090.t1;Parent=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS exon 56505 57260 . + . ID=g12090.t1.exon3;Parent=g12090.t1 NODE_12_length_70433_cov_42.1945 AUGUSTUS CDS 56505 57260 . + 0 ID=cds.g12090.t1;Parent=g12090.t1 #PROT g12090.t1 g12090 MAHARTEKKFVVSAELYDALRELGAINVDAPRAQSTRVVFTNADAWLNTVRNRDTSTPTANPFAKFLLASAGGAAHFEALQKEVEDKTERTFDRAVGVFDEVNISTDIVATRELMNLLSRPPTSPDRVVYQAILRNQPVEHDVAAMTFKGFTTNTVFDATPLQANKLPSCLKVATLPSWLTEAMAAWTKSLRVGDGELSSAPAGTGKTPDSTAGNTGSEPLGLRPNSRGDAGPSGPAGDAQAQPKRNRIRIEPMGEKDIINKLVKLFSDIIGFLPTLTPVELFTIYQQSGLFQIKGQLGPLAEALQDDPVISLKQLTEVLSKKGDPNETMQAFVELGNQLTKRNKSKETKKPRSRPPLPSQPPDETPPLQPPKDDPPLQPPVDDPLVLPPKDDPGHKNCPTHEDPDDDKDVSNPQTPAPDEDTPMSPSLDKGPTRSSKRKTKENAEFDASGAEESDDSDGENGDDDNDEDKGDEDNEDNDEDRGDDDDDDGGDYDEDDDDYKSDDDDAGKGNNGEDGKPRKSLKKKGGLPEVKDSPITDEFQALPEIDAHASESETAKYFKKFAITKTWTKVFRAEEDFMRQPTESGSVVDELTRLESELEETIVGPIRLATYDDDSLQEKSRNEFIAEYTAALEILRLAVGKREPFSDYASKVRRPSFMQALTAVRLRDLTSVGNWSSPGCGKTISAAVASRYVSFSEVDGKQGFVLVFSPSAGGTMLTQWVDAVKSTFSDLKDNATCVNFERPTEFLTLERRRELMKDKLARGNKKREFYFVVNYEFARGPDKVGLLRNIVGDADTAGWPLRTVVFDEIHYLKGADAQQTQSIIHLLENIRKAQKAKGQPEFHVLGMSGTPVKRELKDGWQVLRLFGPKFDEMSTQKMKEIRKMKAANQRILGGVELHRHLVCIGSVRHQIRYDFEMKEERPRVDFPEEYYKDYHGLCETGAVEGGDTKKASGASTIKIQLLLTKARLPKIAEVVKDNVNNGKRTIVYSEYIGGSKDEIGDVAVAADSTSKVFEQKILSMIITNLETLSRPDGSSVRVAVYTGAEKQAPTPGSDTILTRGDHLLGFKQGKYDVLIASSAISTGVDGLQECCSTLVFNVPPPTSAQYEQVVGRLYRRNQTESVVRVIIPQVFLFDQVERSDCKKRELTIRERKQEHNLVLDGELYKRIPEGKEKIAEHLVAWFNRAYEKWKKDQEEAKDVGGNSDMDLDSPDGRDAPPPPPVPPGRPSNGQRKFRSYHREFYNTSSHALNVQFRENPAVFKDYHDLYAQKKKDWTIVPYKIIGNRIVEMVQERMRMEDGEPQPLRVVDMGCGRGWLYAHVKQTLGVANLQSKSVSFLSVDHLIEEAPSRSEETLVECNMAELLSSDAPHASVVQEWKGKVDCVVFSLSFFGPDSGPYLRVAFELLKPGGELVIAETAFRLSEDIVGPFVENVQKIGFTLGTNEDPTKLYKESRAKGWLPTLASDRRIVVCEPPPFAFVVFTKLARKMKENADTVEISFKHANNGDDEEGCDYDDAEGEAEDGSGAMQIDAVDGENTQVRARERRRLGEDTDADTGRDAPPPKRARHDKA* # PASA_UPDATE: g1072.t1, single gene model update, valid-1, status:[pasa:asmbl_3528,status:12], valid-1 NODE_2103_length_7736_cov_42.1468 . gene 2173 6721 . - . ID=g1072;Name=g1072.t1 NODE_2103_length_7736_cov_42.1468 . mRNA 2173 6721 . - . ID=g1072.t1;Parent=g1072;Name=g1072.t1 NODE_2103_length_7736_cov_42.1468 . five_prime_UTR 6657 6721 . - . ID=g1072.t1.utr5p1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 5479 6721 . - . ID=g1072.t1.exon1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 5479 6656 . - 0 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 4726 5149 . - . ID=g1072.t1.exon2;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 4726 5149 . - 1 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 4367 4504 . - . ID=g1072.t1.exon3;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 4367 4504 . - 0 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 3848 3936 . - . ID=g1072.t1.exon4;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 3848 3936 . - 0 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 3299 3542 . - . ID=g1072.t1.exon5;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 3299 3542 . - 1 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 2810 2926 . - . ID=g1072.t1.exon6;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 2810 2926 . - 0 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . exon 2173 2513 . - . ID=g1072.t1.exon7;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . CDS 2199 2513 . - 0 ID=cds.g1072.t1;Parent=g1072.t1 NODE_2103_length_7736_cov_42.1468 . three_prime_UTR 2173 2198 . - . ID=g1072.t1.utr3p1;Parent=g1072.t1 #PROT g1072.t1 g1072 MRVLCTHNPLTKISLHPEGATSTQAIKASRVPAMCAGAYASPVSVVFQASLWVTAILAAIIAVSAVDASLVPSGSPVQHSCVPRNLKAAMKIQSSDSASVYVKWDAPSEASQATAYSIELRFRTGRASVDTGSLPFAAGSGFDDSIFGNDGEDSVDASLVDVTYTPVSVRSTFFRGVTPRGEYTVVVACVLDHSSADDDDGVADRTRNFPSATVHVGPILPRKYERDAPDSVAHGIRRSALSVTCDPGFIPYPNGSCIACSPGTIQLDGACLLCPPGSFQDAYGATVCIGCNNGEYNPYPGNFNSSCLKCPEGAICPPGTIRPLPSLWNNRSVLETDLKYVKSPTASVGRNTVIRVCVGLGAGLFIAFISVYLLHWCGWDRNNILGTTVEVSRRCDVLITDPTMHLYLDRKTLDGAKSNVNMVTTSFNYDYAHTPRVGSSVDSTEASALNTNCGEGEVDVNYGATTRSKRKDGWIDTDAIPVMKRRSSFRGWMTVCAVLCVIIGLAVILQQFFTYRYSEERSLLPGQANPDNLVIDMEIAISVLGTSATCAEYNMDVQVADELNDQTQTLPPGCLDSPDALDHELLTQTLGEGNLQQCKSTGNCIHYFISTRTVMPLRATLVLLLTPRNVSTQPVVGAQGIIFGIRTPSFDKEQPSALMAGSVNKFFYTGSDTANFTMIVVPTIVYDLGTKVNDNSFEIHFVSISYGFGPGQFSVQFLVERPPYYVRIDKVEVQTVTQLLAAVISISAGIIKGFSIVVKGKEFFIRKWHAKKLERALAASSTLGATSASPLLGRINDDGQNPVAGTTRSLRTSRTTASSGEGLSEHLLSDVAAQ* # PASA_UPDATE: g1070.t1, single gene model update, valid-1, status:[pasa:asmbl_3525,status:12], valid-1 NODE_2103_length_7736_cov_42.1468 . gene 16 787 . + . ID=g1070;Name=g1070.t1 NODE_2103_length_7736_cov_42.1468 . mRNA 16 787 . + . ID=g1070.t1;Parent=g1070;Name=g1070.t1 NODE_2103_length_7736_cov_42.1468 . five_prime_UTR 16 49 . + . ID=g1070.t1.utr5p1;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . exon 16 156 . + . ID=g1070.t1.exon1;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . CDS 50 156 . + 0 ID=cds.g1070.t1;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . exon 448 543 . + . ID=g1070.t1.exon2;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . CDS 448 543 . + 1 ID=cds.g1070.t1;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . exon 730 787 . + . ID=g1070.t1.exon3;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . CDS 730 775 . + 1 ID=cds.g1070.t1;Parent=g1070.t1 NODE_2103_length_7736_cov_42.1468 . three_prime_UTR 776 787 . + . ID=g1070.t1.utr3p1;Parent=g1070.t1 #PROT g1070.t1 g1070 MEDPKIDSTVKPDSWKRIEPAKAGRISQSRRIAIAWAGLLTLSFITYSWARKDVRERRLVALKEQRGRLVAEVEKAEGAQGK* # PASA_UPDATE: g1071.t1, single gene model update, valid-1, status:[pasa:asmbl_3527,status:12], valid-1 NODE_2103_length_7736_cov_42.1468 . gene 1069 1865 . - . ID=g1071;Name=g1071.t1 NODE_2103_length_7736_cov_42.1468 . mRNA 1069 1865 . - . ID=g1071.t1;Parent=g1071;Name=g1071.t1 NODE_2103_length_7736_cov_42.1468 . five_prime_UTR 1763 1865 . - . ID=g1071.t1.utr5p1;Parent=g1071.t1 NODE_2103_length_7736_cov_42.1468 . exon 1628 1865 . - . ID=g1071.t1.exon1;Parent=g1071.t1 NODE_2103_length_7736_cov_42.1468 . CDS 1628 1762 . - 0 ID=cds.g1071.t1;Parent=g1071.t1 NODE_2103_length_7736_cov_42.1468 . exon 1069 1344 . - . ID=g1071.t1.exon2;Parent=g1071.t1 NODE_2103_length_7736_cov_42.1468 . CDS 1195 1344 . - 0 ID=cds.g1071.t1;Parent=g1071.t1 NODE_2103_length_7736_cov_42.1468 . three_prime_UTR 1069 1194 . - . ID=g1071.t1.utr3p1;Parent=g1071.t1 #PROT g1071.t1 g1071 MNTPSSQAFGWVTFTVIVGGSAIYAKSVIDKRREEQRLAGLRPTQVLNWEDRVKMDEAMKQYEAQQRQQTAPSGKVASSPFERRARLLTHAFFR* # ORIGINAL: g8496.t1 original gene structure, not modified by PASA NODE_681_length_19144_cov_42.4091 AUGUSTUS gene 11144 11758 . - . ID=g8496;Name=g8496.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS mRNA 11144 11758 . - . ID=g8496.t1;Parent=g8496;Name=g8496.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 11559 11758 . - . ID=g8496.t1.exon1;Parent=g8496.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 11559 11758 . - 0 ID=cds.g8496.t1;Parent=g8496.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 11144 11324 . - . ID=g8496.t1.exon2;Parent=g8496.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 11144 11324 . - 1 ID=cds.g8496.t1;Parent=g8496.t1 #PROT g8496.t1 g8496 MSNQQTSGAPHAHFVDTDAHTPPGGDHGNHHCNEHCHTGTESTEALHGHHGASRDMAGAGSGSHFGRIVDGGHQYGSLGDTSGATGTASGATAGAGNMTNTSRASRPFSTRRDICTDPQHNPPVGF* # ORIGINAL: g8495.t1 original gene structure, not modified by PASA NODE_681_length_19144_cov_42.4091 AUGUSTUS gene 9942 10940 . + . ID=g8495;Name=g8495.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS mRNA 9942 10940 . + . ID=g8495.t1;Parent=g8495;Name=g8495.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 9942 10940 . + . ID=g8495.t1.exon1;Parent=g8495.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 9942 10940 . + 0 ID=cds.g8495.t1;Parent=g8495.t1 #PROT g8495.t1 g8495 MEGGTAAQSAALCQRRRDEIDAVCAIFSSPPIVATFDPFFVIDAKNNAIDAKHTTDIRTNTPPLSNIAETTTLSCVVTLDDALGVTMHTCVEIPPCYPRFVSMQLQITCDSLHRTDVDALYARARDFESERQRDHPDNECLYELFVLLSTESRRLYVARNAMEGASLCRRLDAIRSQEQQHQQQQQQQCASVLLLLIDHMRDRKLYLSHLRRWSDDLCVHCVVLFVGTGARPLIYVAIMSETGDAAVDELVRRLKTQRVDVDSTGHKCKERMSEILLRQRVLIASCGDRLSPGLDVREFKSMDEVVQSLREERSERWIVDALASAGALTDGI* # ORIGINAL: g8497.t1 original gene structure, not modified by PASA NODE_681_length_19144_cov_42.4091 AUGUSTUS gene 12627 16890 . - . ID=g8497;Name=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS mRNA 12627 16890 . - . ID=g8497.t1;Parent=g8497;Name=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 16634 16890 . - . ID=g8497.t1.exon1;Parent=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 16634 16890 . - 0 ID=cds.g8497.t1;Parent=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 16277 16400 . - . ID=g8497.t1.exon2;Parent=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 16277 16400 . - 1 ID=cds.g8497.t1;Parent=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 12627 16157 . - . ID=g8497.t1.exon3;Parent=g8497.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 12627 16157 . - 0 ID=cds.g8497.t1;Parent=g8497.t1 #PROT g8497.t1 g8497 MPLYGRLPVRSPLSSGAATPTRPSRQGAPSHSCAIMNPFLNPSMGRTNFPDMNGSLFGGSTTDDEAAMYSVGLDEDDRGGFDNFNWSIDQIAELHPADIDECANQASFHSHEPHAALAKACLLFDANAEAFFHAALLLPSPGVAARTIRTPQQKSEAAANDNGLTINMHHHDDATTNQQYARTHIPPVESTNDESSLSVTSLSASSNSSARRRRRRLFEDPADVNIVVTSPSVCSERLSSAMAAPLHADGGDHLSVPGVWASSSRRKSSSVSDSMAADSFFELSQSALEYDDGDFSSAVGLAESNFAIDEDDQDPRTMRHVEGGGNFPSHGSALPHLSMFDLDNCSHSPSVGSRPSPYDRIDHTNGGQLYACTPRPQERASGTGHLAGDRESGPPHASTSSGASGTPHPHAGVMGRFLVARALDGPLPRKGVGIPKPVLVRRASTLTGDATDDKENHVPVSTAQYAIATLVSHVTPGTPSHYSVESANTGPHSPALDSTHFGNGSPGPILSSAVAPVRHVSMLQTPGMSPISSGLRPMDFLDELSEERSGQSDSIDSPSLSHSNAQKRTNGNRRQAQGVVKRVAFETSCTHDGRGEGDDCEDDEAQPRSSSRDNEAIGSTSTLSRARTPLSDKPDKPPQRTMYAGTPVPSSGILRYSLQMRGGNATTSTGTTVVAKRHTKPAMPTMPATAHVATTQDEVDHATDRAPGVACESSAKVHIVTDLRSSPSSSSDTTAKRMSDYYGERNAATRDAPAFTAASTDSVRQDTPSAGQGTRSIHPVTPHSYSDNSQHPGSSSSHTPQHSTPFSVSADQSQSAWECTPVVQERPSRDCGVGGRVVDGDQPPMYLPSTPDVLQARHATLARLEAIKTKIACSRMTYGASEMTPAVTPSAATSARQSPGTYISTFNCCAATASTPSFVDKSGRVTSIAAGVSSEGSVSRTARPMSVSDCDSSLAVQGSGYAGVHNWDTTPSSVRHAQAVPSSAFLSEPSTATKREYGYHMQKYDAYVPLGDYAPFNNRAVRLDTTPMSVEARKDRILSQKQTHAMGSASKRYATARYGLGTAYYTPPETPRDASSAFNSQGTSSYVTGTPAGYTSAPGSAAGRLHAQTYTPRTLDANVGATANYNATQSPLDELFARRTLRWQQSGPSGAAADDALGPSTRPLHPGLLANPNAHMAYNRHHHSSAINAIGSSSDAYSSVYSSASGMRPTTASSQRSSSSYLLSGAGAHSATATASSMPHYPATTSSVTSIIGQARHYYASPTDRTSVLRREIRAWGDDLRHRAPGSLTVGSAYSRPLLSSAY* # PASA_UPDATE: g8498.t1, single gene model update, valid-1, status:[pasa:asmbl_8852,status:12], valid-1 NODE_681_length_19144_cov_42.4091 . gene 17436 18115 . - . ID=g8498;Name=g8498.t1 NODE_681_length_19144_cov_42.4091 . mRNA 17436 18115 . - . ID=g8498.t1;Parent=g8498;Name=g8498.t1 NODE_681_length_19144_cov_42.4091 . five_prime_UTR 18054 18115 . - . ID=g8498.t1.utr5p1;Parent=g8498.t1 NODE_681_length_19144_cov_42.4091 . exon 17839 18115 . - . ID=g8498.t1.exon1;Parent=g8498.t1 NODE_681_length_19144_cov_42.4091 . CDS 17839 18053 . - 0 ID=cds.g8498.t1;Parent=g8498.t1 NODE_681_length_19144_cov_42.4091 . exon 17436 17617 . - . ID=g8498.t1.exon2;Parent=g8498.t1 NODE_681_length_19144_cov_42.4091 . CDS 17464 17617 . - 1 ID=cds.g8498.t1;Parent=g8498.t1 NODE_681_length_19144_cov_42.4091 . three_prime_UTR 17436 17463 . - . ID=g8498.t1.utr3p1;Parent=g8498.t1 #PROT g8498.t1 g8498 MLHTVLRLPRQCAGGSLHLRCPTPASTAYALRRPASTASSSSSSSSSSATSVGFNEDILKYLVCPLTKKPLRYDASTNELVSDSINVAYPIVDGIPNLVPQDGRVIGTSKGQVAEVKSPGSQ* # ORIGINAL: g8494.t1 original gene structure, not modified by PASA NODE_681_length_19144_cov_42.4091 AUGUSTUS gene 911 9178 . + . ID=g8494;Name=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS mRNA 911 9178 . + . ID=g8494.t1;Parent=g8494;Name=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 911 1061 . + . ID=g8494.t1.exon1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 911 1061 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 1282 1433 . + . ID=g8494.t1.exon2;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 1282 1433 . + 2 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 1870 1944 . + . ID=g8494.t1.exon3;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 1870 1944 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 2206 4614 . + . ID=g8494.t1.exon4;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 2206 4614 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 4902 5314 . + . ID=g8494.t1.exon5;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 4902 5314 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 5802 5898 . + . ID=g8494.t1.exon6;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 5802 5898 . + 1 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 6174 7640 . + . ID=g8494.t1.exon7;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 6174 7640 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 7885 8795 . + . ID=g8494.t1.exon8;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 7885 8795 . + 0 ID=cds.g8494.t1;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS exon 9067 9178 . + . ID=g8494.t1.exon9;Parent=g8494.t1 NODE_681_length_19144_cov_42.4091 AUGUSTUS CDS 9067 9178 . + 1 ID=cds.g8494.t1;Parent=g8494.t1 #PROT g8494.t1 g8494 MAGRMAASAESSALRRLNSIAATSRPLLITPASSPSLLSVGRFITTNAASGSENVVTIGDVSMTLVEPAHPELVPTNFLSSKDIDSAQQELLRHLRWMMQKDILGQDMFLIGPPGPFRRGVVMKYCELTSREVEFVALSRDTTESDLKQRREIRNGTAYFVDQPAVVAAINGRILVLDGLEKAERNVLPVLNNLLENREMHLEDGRFLVAPHRYDTLLKKHSKADLDAWKLVRVSERFRVIALGLPVPRFRGNPLDPPLRSRFQARDVRPGTYQEQMHAVEMSLAHVTGAAVSDVGDASSASAVQRVSKVVALAAAVRQVDDDPALAKSPDRLPEFPSDGLFVAAKWLSEFPLLSPSAVLSALYPYQLMAAAEARKVVDSAVGKFGLSAGIAPPSPYALVGVDSHDASTAVALFGADGGAIAKVTVPCGGAVNAYPRHGVAPFVRTAYHEGVLGGMMMSHAHADICLIGPRGSGKSAIVREFARLLGYHEEPVPIHRDMTSREMFQSRTTTASGDTDWRPSNLTLAATQGRLAVLDGIHRLHPNTLALLQRLAQDRDVSLHDGTRLVRHDRYATLVSRMGENALRQARVFPIHPSFRMIALAEPPNPDSPSSASSGSGSGASGQPWLSSELLPSFHFYSMRALNKEEERTVVVSLAPGVPEPVLKQLLDFAGRLREGAADHTVLSLSTSLSTRQLVRFARLFAEYPDESLHALIHRACLSRYLPSLVRETLEQILAQSGITPPLPPAPSTHGRPHKHHISAIVPHERKAPMRPGSEALVPDIVFYDNAQHLGILEEMRRDFALGMHLLLVGNQGTGKNKLCDRFLQLLNRPREYIQLHRDSTVQTLTLQPSVRDGVLVYEDSPLLRAVGEGHVLVIDEADKCSVHVTAVLKGLLESGEMMLSDGRRIVPSDAPDAQGIVRTHPDFRMIVLANRPGFPFLGHDFFSSLGDLFACYSVDNPDFESEMEMLRKYGPHVNNETLRRLTLAFSDLRKMVDEGQISYPYSTRELVNIVRHLERFPNEGLASAVRNVFDFDSWDKDVRESVMTAMNRQGIPMGASVNDVNLAKELPLPDALLVEEWSLNYSNAVKVPAVASQVRKRGPFHLELSRTDPMPGRYELRASQFAEDVVAFKFHLQGRNKIVGATATADGCVHLVSSDPAMLYSISPSVDTVRSLDLYPVFPMGTLAKSPEGLTVAPAHDGRIVAHSAHDNTVTVLDPAQGTATLIVPGQASSVDAIARAFTPRQRAPANGQPLFGCSAALGGDGLLVTWSVGGSSIELLDLRTHSQVSVSIPFSVGHVRIAGPRMWLVLAASSPTRMHALIPSRDGGRWTLVPVPSRPTPGSLSPLTDLGAQKTRMFSTDGLSESSLRAVDASLPAGTPGRVLADDASYATAIVPFAMDGDAADASPAVVSRLRRIARKPGTDATPESIGDLSKAVLYSAESSQIVRVVPSRCVLDDATRGKAHSFLEIVDLGRGSARWVPVRPDATGEEDGGGIGVIGTPAHVIYVPGGPHGTKRVALLDRYGGGRVYETDAKALSLSLADWKMMVGSLDASKPLQVTIPRTSGLEALTPKHGKVDKDNQPHVGGNQWAGGSGGRDTAGLGGKGGPYRLDAGHPVYQLSQAEKDAVSAEVKKAARELGRQAFMDRLKEIDMKEFEAAAYEGISSTVRREVRELRVLLESVEAKGKERVWMKNQTDGDIDDARLIEGVMGERSIYRRRADEQPEPGAPPILPKRVRIVVDCSGSMYRFNGVDRRLDREMAAACMMMEAFDGVRQGGRFKYAITGHSGDSPTISLVTEGAPPTNDRDRHKVLKTLHAHAQFCMSGDNTIEAVEAAVKDVVREEGDDYFVLVLSDANLDRYGIEPEALSRALRSDPRVNAYALFVGSLGNQAHALAASLPTGLAFVCMDTKDIPKAMKQIFTSTMLKSRM* # ORIGINAL: g2196.t1 original gene structure, not modified by PASA NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS gene 2257 7296 . - . ID=g2196;Name=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS mRNA 2257 7296 . - . ID=g2196.t1;Parent=g2196;Name=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 4012 7296 . - . ID=g2196.t1.exon1;Parent=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 4012 7296 . - 0 ID=cds.g2196.t1;Parent=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 2763 3602 . - . ID=g2196.t1.exon2;Parent=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 2763 3602 . - 0 ID=cds.g2196.t1;Parent=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 2257 2451 . - . ID=g2196.t1.exon3;Parent=g2196.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 2257 2451 . - 0 ID=cds.g2196.t1;Parent=g2196.t1 #PROT g2196.t1 g2196 MGDQGDPAILPEGNPLGDVQASPRPRFSAANDDAAARRWGSESVASPGTVQHHAMRSMAGREAALSRQGSSNLVAMMHRKASRRRLSLIETDASIAVLAGSSRDRESSDPALEASEWAASADALHRSSDAVAAMARRGSVAAERRGSLISRLADSNHHVHRPTLTPRILSMHEDAARQPTQQHQSSAQSMDGLGPHHHRWASFHDGDASHASPFAIREDNVHEDSHRTDADSTHAGEAIPSPVKAAARVSVGGFFVVEEPVLGSRGSNPATSPTRHRGSSMSMEQQRQQQHQQQDEEAPEYGFESVDYSSQSRRANKSASVPAKVHVPIDLPGSIASPTMSRKASVEDPIVGSTISPEPRISGQESFSFLKSGYGRQSSVALAEQFQSSKGNDNNDRRYSVTLDAPLKIINTQLSALGLRRKDTQAGKIVGYILGAIAFLLISFRFVRLLCFFEYRYRSSLAIELVDDVAWSLCYGGILVMYIYLYHVFRRRNYIHHMLSILEPLMQGSAQRKTLIRTLRAQSATAAILFAVYFPMSTVPYLSNEIRIGAPGEGAFDRIVRDSIGLSYTLIVIIVSNAYICTTFCVFIIVPFVIVHMLIWRIDILLVTMVERDGENGGENGGGLEEVVEERAGSEDEGVEERDGERDGARARERHGDGDGVGDGDRDGDGDVADFVPELPRQQQLEPLPLPALEKAVSILSASMGLAASPATRPRSGTLDRNLVMSELQAHLSNEKKQGSVVERESADGVRGSGGRTGDDEGGSGYGARVSGVEKSRVSNGERLTLPVIAVEIEEVFGNSPGSVTGIANAVSADSDACGTARTSSSLLDGNLDNGEGACSERDLSASADCTFDNSAGNNRTADSHTKAQGVQWHVEATGHARRRPSHNPSVQSEASGWAVERLLLGNGHGTDVTHAMTELPAATEAIMNNAAWDALLIVALRQYSWMVGVLALFFFAPWFFCMVGMKIQTKGDYPPMSDLAIPTIFVTAAALFGALMYKFRRRRRLLRAAIAGHDVRKEVEATAMIVIPYRHLTKSILRIAGRCLAAAIFGVALACSVMVLCYPTCLVGSSMDEDASQCPEAVRMRRNIAIPFIQIPVQTIPFVWMRMILGHTATVPLIKIAAAVESVYLAFAVILGALDYERNSFFRIVGYLPYVILTLAYGRYLAKTRANTTFGRNVAIMMGIGVLVLAGYDFIVLPIFLKSDGTPWRVLIVLVIHKCVTPVFLFVVEQFSLYVCSGVRDIENPHVFTLCAEISFQIMGRMYLTSIGSYADLTLLIAINMAFEACSRLLSPGVTYTVELLITRSKKKAEEAKERSRCSRTELLFIYTRMSATYYSISFAAFFSVFARMFYDNPMSGFSMSETVIRIIVAAVLQAVGEFLGHLFSCKFEVDYLERPAIVMDKGVRKKSYKILVILSSIVVLYLMQRVCAIIRVGKNVV* # ORIGINAL: g2195.t1 original gene structure, not modified by PASA NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS gene 73 1439 . - . ID=g2195;Name=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS mRNA 73 1439 . - . ID=g2195.t1;Parent=g2195;Name=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 1065 1439 . - . ID=g2195.t1.exon1;Parent=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 1065 1439 . - 0 ID=cds.g2195.t1;Parent=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 707 790 . - . ID=g2195.t1.exon2;Parent=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 707 790 . - 0 ID=cds.g2195.t1;Parent=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS exon 73 374 . - . ID=g2195.t1.exon3;Parent=g2195.t1 NODE_2154_length_7491_cov_39.2768_potentialcontaminant AUGUSTUS CDS 73 374 . - 0 ID=cds.g2195.t1;Parent=g2195.t1 #PROT g2195.t1 g2195 MCAHRDRILGSLKAMRLRDELVLSSIFESFESSVVIDVGAFQGTYSIPAARAGHRIIAVEPMRRNALVLRRNIEKARLGNRAVVVDAAVIGTGPPRYVELTDAGRSMESFVSVDIWKDRDFPKIKVFGLSVDDIVNQYVRPDEEILMLKMDVQGFEPIAIVGATNTLRRHTPLMLQFEFWPLAYRLARNNTREPTDFLAFVASFGYVFFDMGHHSPLDDGVRPQHFEEFVASMDRDEEEGKPLPGHLPKDGLG # PASA_UPDATE: g2783.t1, single gene model update, valid-1, status:[pasa:asmbl_7314,status:12], valid-1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . gene 1 546 . - . ID=g2783;Name=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . mRNA 1 546 . - . ID=g2783.t1;Parent=g2783;Name=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . five_prime_UTR 360 546 . - . ID=g2783.t1.utr5p1;Parent=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . exon 164 546 . - . ID=g2783.t1.exon1;Parent=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . CDS 164 359 . - 0 ID=cds.g2783.t1;Parent=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . exon 1 25 . - . ID=g2783.t1.exon2;Parent=g2783.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . CDS 1 25 . - 2 ID=cds.g2783.t1;Parent=g2783.t1;3_prime_partial=true #PROT g2783.t1 g2783 MAIKVYGMAMSTCTRRVITALEEKGLAYELEIVDLMKGAHKQPDFLKLQPFGQIPVLEDDGYRVYESRAIVHY # PASA_UPDATE: g2784.t1, single gene model update, valid-1, status:[pasa:asmbl_7313,status:12], valid-1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . gene 1144 1623 . + . ID=g2784;Name=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . mRNA 1144 1623 . + . ID=g2784.t1;Parent=g2784;Name=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . five_prime_UTR 1144 1255 . + . ID=g2784.t1.utr5p1;Parent=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . exon 1144 1451 . + . ID=g2784.t1.exon1;Parent=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . CDS 1256 1451 . + 0 ID=cds.g2784.t1;Parent=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . exon 1599 1623 . + . ID=g2784.t1.exon2;Parent=g2784.t1 NODE_4433_length_1623_cov_142.513_potentialcontaminant . CDS 1599 1623 . + 2 ID=cds.g2784.t1;Parent=g2784.t1;3_prime_partial=true #PROT g2784.t1 g2784 MAIKVYGIAMSTCTRRVITALEEKGLAYELVIVDLMKGAHKQPDFLKLQPFGQIPVLEDDGYHVYESRAIVHY # ORIGINAL: g653.t1 original gene structure, not modified by PASA NODE_3879_length_2577_cov_38.4456 AUGUSTUS gene 54 837 . - . ID=g653;Name=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS mRNA 54 837 . - . ID=g653.t1;Parent=g653;Name=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS exon 754 837 . - . ID=g653.t1.exon1;Parent=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS CDS 754 837 . - 0 ID=cds.g653.t1;Parent=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS exon 299 428 . - . ID=g653.t1.exon2;Parent=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS CDS 299 428 . - 0 ID=cds.g653.t1;Parent=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS exon 54 154 . - . ID=g653.t1.exon3;Parent=g653.t1 NODE_3879_length_2577_cov_38.4456 AUGUSTUS CDS 54 154 . - 2 ID=cds.g653.t1;Parent=g653.t1 #PROT g653.t1 g653 MADNNAEVDDADVIVGEDFYALLNVGKDASVEDVKGAYKRLCVIYHPDKHREEDDKAAAEMMFNKIHKAYSVLSDPHKRAIYDLYGEEGLRAGLEVGPHLTGARE # ORIGINAL: g7574.t1 original gene structure, not modified by PASA NODE_1106_length_13919_cov_44.1909 AUGUSTUS gene 808 4911 . + . ID=g7574;Name=g7574.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS mRNA 808 4911 . + . ID=g7574.t1;Parent=g7574;Name=g7574.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 808 3446 . + . ID=g7574.t1.exon1;Parent=g7574.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 808 3446 . + 0 ID=cds.g7574.t1;Parent=g7574.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 3624 4911 . + . ID=g7574.t1.exon2;Parent=g7574.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 3624 4911 . + 1 ID=cds.g7574.t1;Parent=g7574.t1 #PROT g7574.t1 g7574 MLGYMYARAGMDPSPTNDSTSAKSSGPCSRHDSSRPVISGALIASQTSSFPPPVEKDGVSEGSDGMASDESDVVLLSPPMLLEQVFAALPLPLDPPVTPAETATVCSVTSGAAVAIAASGDSSGSRNSSNNGIDAGSAAQTHPNASTVELKKPQKLLQRPMQQMHVTRFPGYYQPPRPRLVYGHEEADLFVHTAHAALGLPGASVAQPVAFLPDAWNSSLVAAPLGHFNNHCNANAPPSAAFLRPENSASDMIRQKPLGNNVGTKTVDLRRPNLATSAHAERRPKKTTLRQHTEASNTSADPSTPTATVPLPANYAASPLFSSFALMPDTRSSPSDAHVPAPAHFTTPLNGFSADAEAACALFAPPTPPRFSDTTPRRAVASPLVRKAHDPRICFFPLAPCTCEAGSVGTNTVTAAAAPTSAPATLREHVMGASIAPSAALNTTYVGHPAHMHDMGGGAQAGELFKRKRGRPRKNAAPSSIPGTDFFRVPTWIPGVSSNATPTYGHVPVEPIVVSFPTSAQANITTAPDDGHVHKKPRRSNVTVPVTATVPQSALSPSPAPSRLCGDGKEASSTASIGAQLSALQNASPTQAGHTHAESHSREVFSSALISAMQDVAGEDERFFVPIRDNWCAEWNASVQIVQGGARIMAPVVAESDTTTTAAILQRDDFVRPTTFIRGVIPPDCAVAGADDCVTRPCHYDADDIDGAWLAMYTSRAGAPAGAKVCLPPPAKSEDAAPVDATAHVTPPLEIIAPADGVGEEPTQTSMQPSSQSSMLPLETAIADNTVAHSATAYPLAPASPSGRADAVDAAASLLACDVPPSGDVPNEPLTQDVFERLIWMYERAAWEGIVRTLAASETLADFDEDASCDVCQLGDVEDSNEIVFCDGCDIAVHQACYGVTLIPEGSWLCAPCAAKETRPSCVLCPNKGGALKPVESKYGELRKWAHVSCALWIPEVLIGNAEKMEPIVGVDRVPSSRRSLVCCLCERRGACIQCHVKRCTTSFHVTCSQRSGLTMVVRETASGGVAHEAFCPRHGCEPTASDVRGMPASKIARIRRIEENFHAHAKPSRVAASVGCSVTDARAVWGYWVSRRKERGGKALVRHFSDIVRRREQGDSGVPKKKSAIKSMRRNLLRLRELCGAVGERDKKDRQRVADAIAAVERLAHANSPPSCVDMQCDNADMDTDARMETTEVEAITAAVSALPDKSHDSPLLLTPDANTTATMMTDGDVMEVDVLTTGGILPTSGECVVSATAMSGRGIETLQPETVIMECDSHSPLSEEGSHVIVALPQPVSSATAFGLLPMFNM* # PASA_UPDATE: g7577.t1, single gene model update, valid-1, status:[pasa:asmbl_404,status:3], valid-1 NODE_1106_length_13919_cov_44.1909 . gene 12070 13324 . + . ID=g7577;Name=g7577.t1 NODE_1106_length_13919_cov_44.1909 . mRNA 12070 13324 . + . ID=g7577.t1;Parent=g7577;Name=g7577.t1 NODE_1106_length_13919_cov_44.1909 . five_prime_UTR 12070 12210 . + . ID=g7577.t1.utr5p1;Parent=g7577.t1 NODE_1106_length_13919_cov_44.1909 . exon 12070 13324 . + . ID=g7577.t1.exon1;Parent=g7577.t1 NODE_1106_length_13919_cov_44.1909 . CDS 12211 13242 . + 0 ID=cds.g7577.t1;Parent=g7577.t1 NODE_1106_length_13919_cov_44.1909 . three_prime_UTR 13243 13324 . + . ID=g7577.t1.utr3p1;Parent=g7577.t1 #PROT g7577.t1 g7577 MHSLNEVFEVEASLARFADLRVRRRLTHALVIHAILISVLFYDAASIARESKTVTSVPVMRFVFVLAVVAAHVALLRTDDSITRSGVTAVIRPLLRTGKKSQVIAKAVTSSYDATASPSVHSFTAVAEESSCLFAKSAKMWGSPGYNSAISLEDNIRSSVPMLTLCAMEALNSRIDAFVIEINGDAHFSSLKAFASTVNRTLRTLSDADPRGAKCMSRTYIDKPGWHFEFAGMPFFVTTFAPCYPQDGHARYCAGGSVLGTGERSCFVLFQPEVSFHQKSLPLDDPTTEEDNPRHIRDRIRNNFKREGMEYDVPPTVVYSPAIHIVRPMDALSTDVVRWWEEK* # ORIGINAL: g7576.t1 original gene structure, not modified by PASA NODE_1106_length_13919_cov_44.1909 AUGUSTUS gene 8530 11347 . + . ID=g7576;Name=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS mRNA 8530 11347 . + . ID=g7576.t1;Parent=g7576;Name=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 8530 8600 . + . ID=g7576.t1.exon1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 8530 8600 . + 0 ID=cds.g7576.t1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 8733 9093 . + . ID=g7576.t1.exon2;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 8733 9093 . + 1 ID=cds.g7576.t1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 9336 9572 . + . ID=g7576.t1.exon3;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 9336 9572 . + 0 ID=cds.g7576.t1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 9795 9920 . + . ID=g7576.t1.exon4;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 9795 9920 . + 0 ID=cds.g7576.t1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 10124 10539 . + . ID=g7576.t1.exon5;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 10124 10539 . + 0 ID=cds.g7576.t1;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS exon 10753 11347 . + . ID=g7576.t1.exon6;Parent=g7576.t1 NODE_1106_length_13919_cov_44.1909 AUGUSTUS CDS 10753 11347 . + 1 ID=cds.g7576.t1;Parent=g7576.t1 #PROT g7576.t1 g7576 MRSLNRLKPVVYWALIVLVMVGLGFTRIKSRPTSNSNTSFGASNFTNRAESRRATAAVLDSPETEYVEDAEVSSQEMARAGVAPLQIAAHRSLIVADSASKFTTEAPLSALDGKWTADAKPFAGLKMVHLDLKGAPPTLAYMLEFFALIKDNGADGVIMEYEDTFPFSDDLSVLAAPNAYTSDDIAAIVAAAKSLGLEIMPLVQSFGHLEFVLKHQQYMPLRERPTEPMSVCGSNTAAADLIMKMIQQVVAAHPGVRWIHLGGDEVYNLATCEKCSPNGPEKTFLAHMTQILTRTKALGVQPIIWDDMMRKWPVTTISKLGGGLVEPMVWGYKENLATIHPPDLFDRYAIVFKRVWIASAFKGASTPAEIFTPVAYHVMNHFAWLTTVAKYDNIVGIAITGWSRYDHYATLCELLPSAIPSLITCLSVLNEGRFDADTHQKIALLLGFTNSIDPDFGAISGFQETFAIAPPQSYKDCTRGTFPGNNVYFVTCLLSTMQLRALRAVDQLSAWTTPFLSKKDLLNPWRVMLHVRKVHAIADELKGMRPQVIASLDGVVKGDAAEEFVQDKIDRLVREMQVAADRARDTSLRAVELHQPAVTAR* # PASA_UPDATE: g7575.t1, single gene model update, valid-1, status:[pasa:asmbl_401,status:3], valid-1 NODE_1106_length_13919_cov_44.1909 . gene 5752 7945 . - . ID=g7575;Name=g7575.t1 NODE_1106_length_13919_cov_44.1909 . mRNA 5752 7945 . - . ID=g7575.t1;Parent=g7575;Name=g7575.t1 NODE_1106_length_13919_cov_44.1909 . five_prime_UTR 7914 7945 . - . ID=g7575.t1.utr5p1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 7913 7945 . - . ID=g7575.t1.exon1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 7913 7913 . - 0 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 7590 7625 . - . ID=g7575.t1.exon2;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 7590 7625 . - 2 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 7409 7503 . - . ID=g7575.t1.exon3;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 7409 7503 . - 2 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 7115 7202 . - . ID=g7575.t1.exon4;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 7115 7202 . - 0 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 6758 6861 . - . ID=g7575.t1.exon5;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 6758 6861 . - 2 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 6474 6581 . - . ID=g7575.t1.exon6;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 6474 6581 . - 0 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . exon 5752 6060 . - . ID=g7575.t1.exon7;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . CDS 5875 6060 . - 0 ID=cds.g7575.t1;Parent=g7575.t1 NODE_1106_length_13919_cov_44.1909 . three_prime_UTR 5752 5874 . - . ID=g7575.t1.utr3p1;Parent=g7575.t1 #PROT g7575.t1 g7575 MPEYKLLYFGIRGRGEAIRLLLADNGLAFDDAKAENWPQLKPTLPFKQLPVFYDGDFVIPQSNAILRHLGRAHNLYGSSPREAARIDFINDAVEDQRLAYARLIYREYDTHKQQFIDALPATFENFEALLAANNGGSGFLVGDKISFADYNMFDLLDIHLVLAPDCLKSFPLLTAYHGRIAARPNVAKHIDSGRKYTAVNGNGKQ* # PASA_UPDATE: g3580.t1, single gene model update, valid-1, status:[pasa:asmbl_8169,status:3], valid-1 NODE_558_length_21204_cov_43.1434 . gene 8569 12514 . + . ID=g3580;Name=g3580.t1 NODE_558_length_21204_cov_43.1434 . mRNA 8569 12514 . + . ID=g3580.t1;Parent=g3580;Name=g3580.t1 NODE_558_length_21204_cov_43.1434 . five_prime_UTR 8569 8643 . + . ID=g3580.t1.utr5p1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 8569 8737 . + . ID=g3580.t1.exon1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 8644 8737 . + 0 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 8826 8852 . + . ID=g3580.t1.exon2;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 8826 8852 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 8946 9137 . + . ID=g3580.t1.exon3;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 8946 9137 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 9262 9505 . + . ID=g3580.t1.exon4;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 9262 9505 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 9630 9682 . + . ID=g3580.t1.exon5;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 9630 9682 . + 1 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 9792 10055 . + . ID=g3580.t1.exon6;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 9792 10055 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 10205 10272 . + . ID=g3580.t1.exon7;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 10205 10272 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 10420 10798 . + . ID=g3580.t1.exon8;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 10420 10798 . + 0 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 10950 11183 . + . ID=g3580.t1.exon9;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 10950 11183 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 11366 11493 . + . ID=g3580.t1.exon10;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 11366 11493 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 11638 11701 . + . ID=g3580.t1.exon11;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 11638 11701 . + 0 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 11880 11989 . + . ID=g3580.t1.exon12;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 11880 11989 . + 2 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . exon 12144 12514 . + . ID=g3580.t1.exon13;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . CDS 12144 12314 . + 0 ID=cds.g3580.t1;Parent=g3580.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 12315 12514 . + . ID=g3580.t1.utr3p1;Parent=g3580.t1 #PROT g3580.t1 g3580 MSLTLLRGRVPVGNLCQISTSCRSLGLRTPAGFPVRFKHAAVATPTGSEFYQKLYASSIRDPERFWGTLAKSTLKWNKEFEQVRDIDLTRGNISWFQGGYLNVAENCIDRHLATRGDQTAIIWETDNAADSKKITYRELHSEVCRLANALKRDGVRKGDTVTIYMPVSPHAVYAMLACARIGAVHSVVFAGFSAEALRSRIIDAKSTHIITTDQGLRGGKPIELKQIVDKAIAECPGVRRVFVAERTGASVPMEPGRDVSLNAAMAAERPYCPPESMHAEDPLFLLYTSGSTGTPKGMMHTTGGYLLYGAVSHKYVFDHRDGDVFGCMADIGWITGHTYVVYAPLCNGGTTVLFESTPNYPHPGRYWETVQKHRITQFYTAPTALRLLQTFSDEHVNKFDLSSIRVLGSVGEPINPEAWHWYHTIVGKKRCSIVDTWWQTETGGIMMTPLPGDTDAKPGAAMRPMFGVEPVLLDDKGKEIHGNDVSGILCLKSVTPGMARTISGDHARYIDSMYKPFPGYYFTGDGAHRDKDGAMFITGRVDDVINVSGHRLGTAEVEGSLEEHHSIAEAAVVGYPHAIKGQGIYAYVVLKDGHSTNEKLVAELRTLVRKDIGPFAAPDVIQFTSGLPKTRSGKIMRRILRKIASSDYADLGDTSTLNDPAVVEQLVEGRKTQPK* # PASA_UPDATE: g3584.t1, single gene model update, valid-1, status:[pasa:asmbl_8171,status:12], valid-1 NODE_558_length_21204_cov_43.1434 . gene 19872 20570 . + . ID=g3584;Name=g3584.t1 NODE_558_length_21204_cov_43.1434 . mRNA 19872 20570 . + . ID=g3584.t1;Parent=g3584;Name=g3584.t1 NODE_558_length_21204_cov_43.1434 . five_prime_UTR 19872 19950 . + . ID=g3584.t1.utr5p1;Parent=g3584.t1 NODE_558_length_21204_cov_43.1434 . exon 19872 20100 . + . ID=g3584.t1.exon1;Parent=g3584.t1 NODE_558_length_21204_cov_43.1434 . CDS 19951 20100 . + 0 ID=cds.g3584.t1;Parent=g3584.t1 NODE_558_length_21204_cov_43.1434 . exon 20295 20570 . + . ID=g3584.t1.exon2;Parent=g3584.t1 NODE_558_length_21204_cov_43.1434 . CDS 20295 20375 . + 0 ID=cds.g3584.t1;Parent=g3584.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 20376 20570 . + . ID=g3584.t1.utr3p1;Parent=g3584.t1 #PROT g3584.t1 g3584 MPENAPTADERKKCYTSRDAYFACLDKNGHDDTKCAELRKTLDDACLPSWVGHFLRKRAADAYKKKIYSTQPALDK* # PASA_UPDATE: g3583.t1, single gene model update, valid-1, status:[pasa:asmbl_8174,status:3], valid-1 NODE_558_length_21204_cov_43.1434 . gene 17569 19670 . - . ID=g3583;Name=g3583.t1 NODE_558_length_21204_cov_43.1434 . mRNA 17569 19670 . - . ID=g3583.t1;Parent=g3583;Name=g3583.t1 NODE_558_length_21204_cov_43.1434 . five_prime_UTR 19624 19670 . - . ID=g3583.t1.utr5p1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 19401 19670 . - . ID=g3583.t1.exon1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 19401 19623 . - 0 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 19005 19136 . - . ID=g3583.t1.exon2;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 19005 19136 . - 2 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 18659 18817 . - . ID=g3583.t1.exon3;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 18659 18817 . - 2 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 18351 18486 . - . ID=g3583.t1.exon4;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 18351 18486 . - 2 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 17930 18066 . - . ID=g3583.t1.exon5;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 17930 18066 . - 1 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . exon 17569 17750 . - . ID=g3583.t1.exon6;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . CDS 17641 17750 . - 2 ID=cds.g3583.t1;Parent=g3583.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 17569 17640 . - . ID=g3583.t1.utr3p1;Parent=g3583.t1 #PROT g3583.t1 g3583 MISLAPMRGRLLPTSISRVLSTTTANGVSATRTAFHPDGRSTMVGSNKQRTAAACVIGDEILTGKVADTNTHTLAKFCFAHGISLRRVEIVPDVEDDIVKAVRNLSQGHDLVFTSGGIGPTHDDITYAAIAKCFGRSLEYHAPTLELMERISAKPPNEAARRMALIPYPANVLQTEGFWVPLVVCENVYILPGVPFLFSKMLEGMSSHIGKGVSLARASLYTPLAETDFADALRRLQETFPSVAIGSYPRFLDKKVRGMLTFEGFDADKVAECAQAARLLVHGADSPDECVLPLKSSL* # PASA_UPDATE: g3582.t1, single gene model update, valid-1, status:[pasa:asmbl_8170,status:3], valid-1 NODE_558_length_21204_cov_43.1434 . gene 14959 17537 . + . ID=g3582;Name=g3582.t1 NODE_558_length_21204_cov_43.1434 . mRNA 14959 17537 . + . ID=g3582.t1;Parent=g3582;Name=g3582.t1 NODE_558_length_21204_cov_43.1434 . five_prime_UTR 14959 15019 . + . ID=g3582.t1.utr5p1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 14959 15032 . + . ID=g3582.t1.exon1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 15020 15032 . + 0 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 15170 15229 . + . ID=g3582.t1.exon2;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 15170 15229 . + 2 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 15350 15502 . + . ID=g3582.t1.exon3;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 15350 15502 . + 2 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 15722 15882 . + . ID=g3582.t1.exon4;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 15722 15882 . + 2 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 16064 16234 . + . ID=g3582.t1.exon5;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 16064 16234 . + 0 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 16363 16495 . + . ID=g3582.t1.exon6;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 16363 16495 . + 0 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 16643 16901 . + . ID=g3582.t1.exon7;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 16643 16901 . + 2 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . exon 17125 17537 . + . ID=g3582.t1.exon8;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . CDS 17125 17155 . + 1 ID=cds.g3582.t1;Parent=g3582.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 17156 17537 . + . ID=g3582.t1.utr3p1;Parent=g3582.t1 #PROT g3582.t1 g3582 MGRPGFGGRGGDRGGGDRGGRGGRGGFGARGGGVGQRGGFGGARGSPRGGFGGGFGGGRGAPRGRGGDRGGRGGRGAGGRGGARGGAKVVIEPHRHEGVFIARGKEDVIVTKNLVPGESVYGEKRIAVETDGNKVEYRVWNPFRSKLCAAIVGGVDNIYIKPGSKVLYLGAASGTTVSHVADLVGPEGLVYAVEFSHRSGRDLVNVAKKRTNVIPIVEDARHPHKYRMLVGMVDTVFADVAQPDQARIVGINAQYFLKTGGHFVISIKANCIDSTAEAATVFAGEVKKLQELQLKPQEQLTLEPYERDHAVVVGTYRPPPKDSKKK* # ORIGINAL: g3581.t1 original gene structure, not modified by PASA NODE_558_length_21204_cov_43.1434 AUGUSTUS gene 12658 14434 . - . ID=g3581;Name=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS mRNA 12658 14434 . - . ID=g3581.t1;Parent=g3581;Name=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 14198 14434 . - . ID=g3581.t1.exon1;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 14198 14434 . - 0 ID=cds.g3581.t1;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 13974 14101 . - . ID=g3581.t1.exon2;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 13974 14101 . - 0 ID=cds.g3581.t1;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 13713 13860 . - . ID=g3581.t1.exon3;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 13713 13860 . - 1 ID=cds.g3581.t1;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 13306 13467 . - . ID=g3581.t1.exon4;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 13306 13467 . - 0 ID=cds.g3581.t1;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 12658 13191 . - . ID=g3581.t1.exon5;Parent=g3581.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 12658 13191 . - 0 ID=cds.g3581.t1;Parent=g3581.t1 #PROT g3581.t1 g3581 MALRFSLPSCARLRGGFRVVPGAPSRCAVPRRYTSGSAASAEAQMSAEQEMSLLRFADRIRVFIYKAKLMTKATLVAATAVGGMYFAATTYDHYSSRLSDGKKTTPFAAFNTGVAVIDKHVGALRWDLYALPAAISSIHVGVFALTKGRYGGALRRNLVHWPNQPTIRSLLLNQFFHMDAKHLLVTVGTIMAVGPFLQQILGPAHFVACVLSGGIAGTLVAHNWRVFTLSRLSTYGGGSTAFALLGTGAGLYPHWRPAAIADWKGNLDAKDMIVCTAVMWGLLFIGGGIGLDFIAHLGAMGYGWWRGSIKLNDVIDKLVADDAAAAVSLAKAQSVDTSKEVAKTPVMDVDPIFDDDADDIMNTSSKQKRESRLLTPSQRQSEMDATVVRVIGKIEAALGSAG* # ORIGINAL: g3578.t1 original gene structure, not modified by PASA NODE_558_length_21204_cov_43.1434 AUGUSTUS gene 423 2224 . - . ID=g3578;Name=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS mRNA 423 2224 . - . ID=g3578.t1;Parent=g3578;Name=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 2106 2224 . - . ID=g3578.t1.exon1;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 2106 2224 . - 0 ID=cds.g3578.t1;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 1935 1998 . - . ID=g3578.t1.exon2;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 1935 1998 . - 1 ID=cds.g3578.t1;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 1754 1829 . - . ID=g3578.t1.exon3;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 1754 1829 . - 0 ID=cds.g3578.t1;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 1439 1567 . - . ID=g3578.t1.exon4;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 1439 1567 . - 2 ID=cds.g3578.t1;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS exon 423 1294 . - . ID=g3578.t1.exon5;Parent=g3578.t1 NODE_558_length_21204_cov_43.1434 AUGUSTUS CDS 423 1294 . - 2 ID=cds.g3578.t1;Parent=g3578.t1 #PROT g3578.t1 g3578 MGVKPFFRPSTCHGSPGCLEETRWIRQNDEVRKMTFVLHGTNMTNTGELVDESPMLQKEIKQFVAIFLQDNARGGPLRSDNLLIHCLRFPRSKDDVVRFKHHGNTLRNHPFDYEFHARLLQPWPEDEPDEDTAAEVLDNGKARATEVSATQRIVNFFVKSIVDRFRVQPRAADPVVSDDVAGRQKAANVNGITHHGNVDAINSNGKAGDVALARSNAGAAGLSRRDLRAVQRQESNSDVMTESSQTRMASPPPNKVVAGLRDRSRLRKVLLQAGKEAAKEAPKSKPKPQQKPKSKPAAKEPKKATGKASPRQTQKSSAPNIADDAESDEQLTQPLFSDSAVPQYLTQEAVLRLTYDESGDESISIGGNSISYSAKRRRSESVEDNDVSEETPSKRLKVRAASCVSPFPHVDCGVHVHSA* # PASA_UPDATE: g3579.t1, single gene model update, valid-1, status:[pasa:asmbl_8167,status:12],[pasa:asmbl_8173,status:12], valid-1 NODE_558_length_21204_cov_43.1434 . gene 2536 7487 . - . ID=g3579;Name=g3579.t1 NODE_558_length_21204_cov_43.1434 . mRNA 2536 7487 . - . ID=g3579.t1;Parent=g3579;Name=g3579.t1 NODE_558_length_21204_cov_43.1434 . five_prime_UTR 7169 7487 . - . ID=g3579.t1.utr5p1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 7053 7487 . - . ID=g3579.t1.exon1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 7053 7168 . - 0 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 6851 6968 . - . ID=g3579.t1.exon2;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 6851 6968 . - 1 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 5976 6762 . - . ID=g3579.t1.exon3;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 5976 6762 . - 0 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 5464 5864 . - . ID=g3579.t1.exon4;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 5464 5864 . - 2 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 5094 5357 . - . ID=g3579.t1.exon5;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 5094 5357 . - 0 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . exon 2536 4962 . - . ID=g3579.t1.exon6;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . CDS 2770 4962 . - 0 ID=cds.g3579.t1;Parent=g3579.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 2536 2769 . - . ID=g3579.t1.utr3p1;Parent=g3579.t1 #PROT g3579.t1 g3579 MPDLVALAKQLLAELSPDESRTSDALLEELIKRKALDEEDEDPESLAVTFNYALYDDSNKPKSDIVRLPVTPATYALKSNYNAYLLSATGRPKRNATRQVDLGDKSEDRLLKPREKAASKSNAAIAQASISVCDPIGDAPSPATSRSSKSVGIKGSLHKPPADAKLDTRASVRLVEVREGSERRSRRLEEVSLETPEDSAVSLTPAHSRLTRAAARSVPEGRATADSSRTAKSEADAVSSQTRRSRRVAKMDMDNSLCVVEGTENGIDSHRGDESRPECRTEEIVVCNEFSNALSEAEAINHEHADGAQLVSTNPTGGDTSNTAAALVELSQGSGSLDITERAISLSEIIPPLPLPAQSAPAPSTISTAFQYPGIQVKDAAVAAAIKAAENARLQGTLRGRRTKSRAGEDTDSLPANVRARLLNQGTIDTARGTYSPASMQKYLPVKPEPPKWNGDPEMMFDKSSSPILQLDLSEILCAEVFNSLSAEDREHLASFLAPIDVAQCADSTSVAVNGLFSSSSVKRSMKELAKGVEIGSFDSQQGALINSKAQAAKRRWEGRFKDENFEAYWGERSVQANRPVSGPPKRGRPPNNAHQPILAHVPMPMRKRKGLKPGKGDLVNGKAIDHVHKPTSVAIIGAAAKAAFGLKGMGAPKRAGKGRPPGSKSKSPAKVADMEKRKRGPKPKAVDSSVPTVGKGKRRSAKAQAATHGGVDAVGVSGSLAGQAPRKRGRPVDGEKISRGRGSKRTKVMGDDGGIDGSEEHTMHRGRTSQMLHQQQMQQHQQMQQHQQMQQSSMGMDYNQGMPFDASAMYEQQMAFGRFTPDPFVSSRGNGGGGMGMLSPGAHVTMSPGRFGSESATTPRGGQQKSMGMLPYIGGGSSSGALGSMAGMSAMGGMGGFSQGSQGGYGFMNDLSGGLQQGSAMGAPFVPQQSLGRGSSGYMMQGYGGQMGMPFLQQQIGSMPFGQSLAMGPMSSMSGGDQMMPGFPMHGLQQQNAYGGQPMGGGGRLGGMGMGGLVYGGQQSLHQFQQNPLPLQQQQRGGGSQSLQSQHQPALLQGQNQGQQRLAQTQFNKQVQQQLAYAAYPGGVGSNGGNGASNGTNGGGSSNSSGSSTGTGVAFGAGSLNGQLGAGLQPPPSQQQQLGGSPFYVNNGMGNQSGLGGFQSNMNIGSPQQQQQYGSAQQIALRKTSGGGDGPQQLQFGMQSRNPGSQQQQQQQQFAMGGFGGGQSMSGVNGGLSSMNSMGLYGGQGGGSSTMMQPFALGPQLHMQQQQQQQHAGDDQSQRTPGGLEDDFRMA* # PASA_UPDATE: g3585.t1, single gene model update, valid-1, status:[pasa:asmbl_8168,status:12], valid-1 NODE_558_length_21204_cov_43.1434 . gene 20572 21107 . - . ID=g3585;Name=g3585.t1 NODE_558_length_21204_cov_43.1434 . mRNA 20572 21107 . - . ID=g3585.t1;Parent=g3585;Name=g3585.t1 NODE_558_length_21204_cov_43.1434 . exon 20572 21107 . - . ID=g3585.t1.exon1;Parent=g3585.t1 NODE_558_length_21204_cov_43.1434 . CDS 20607 21107 . - 0 ID=cds.g3585.t1;Parent=g3585.t1 NODE_558_length_21204_cov_43.1434 . three_prime_UTR 20572 20606 . - . ID=g3585.t1.utr3p1;Parent=g3585.t1 #PROT g3585.t1 g3585 MDISVCVLYFCAHTAQPAQAVPTNKAAVEEKPAVKVHEAPVAASAPPSQGAPTHVIHTPLQSHAPAAPTRPLSFHPLQPLVVHGNDAHANAHAHAHVHCSSAAVADVNAAADALSEKLRAASELLRTTSNVSDASALCRLIKDCAEALIVVRSLQHQQYSSDTVSQ* # PASA_UPDATE: g509.t1, single gene model update, valid-1, status:[pasa:asmbl_9664,status:12],[pasa:asmbl_9667,status:12], valid-1 NODE_849_length_16825_cov_30.0288 . gene 6555 15746 . - . ID=g509;Name=g509.t1 NODE_849_length_16825_cov_30.0288 . mRNA 6555 15746 . - . ID=g509.t1;Parent=g509;Name=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 15644 15746 . - . ID=g509.t1.exon1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 15644 15746 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 14840 15334 . - . ID=g509.t1.exon2;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 14840 15334 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 14487 14696 . - . ID=g509.t1.exon3;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 14487 14696 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 14305 14354 . - . ID=g509.t1.exon4;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 14305 14354 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 14150 14195 . - . ID=g509.t1.exon5;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 14150 14195 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 13863 13917 . - . ID=g509.t1.exon6;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 13863 13917 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 13427 13512 . - . ID=g509.t1.exon7;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 13427 13512 . - 1 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 13028 13141 . - . ID=g509.t1.exon8;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 13028 13141 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 12702 12803 . - . ID=g509.t1.exon9;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 12702 12803 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 12367 12471 . - . ID=g509.t1.exon10;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 12367 12471 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 11995 12099 . - . ID=g509.t1.exon11;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 11995 12099 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 11651 11703 . - . ID=g509.t1.exon12;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 11651 11703 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 11070 11243 . - . ID=g509.t1.exon13;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 11070 11243 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 10637 10726 . - . ID=g509.t1.exon14;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 10637 10726 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 10418 10501 . - . ID=g509.t1.exon15;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 10418 10501 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 9609 10005 . - . ID=g509.t1.exon16;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 9609 10005 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 9149 9326 . - . ID=g509.t1.exon17;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 9149 9326 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 8633 8840 . - . ID=g509.t1.exon18;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 8633 8840 . - 1 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 8310 8410 . - . ID=g509.t1.exon19;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 8310 8410 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 7875 8005 . - . ID=g509.t1.exon20;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 7875 8005 . - 1 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 7478 7545 . - . ID=g509.t1.exon21;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 7478 7545 . - 2 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . exon 6555 7243 . - . ID=g509.t1.exon22;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . CDS 7076 7243 . - 0 ID=cds.g509.t1;Parent=g509.t1 NODE_849_length_16825_cov_30.0288 . three_prime_UTR 6555 7075 . - . ID=g509.t1.utr3p1;Parent=g509.t1 #PROT g509.t1 g509 MISFTIFANTLTMPTPTVQKTYTFTRAPSSNLTYSYSVGCNTNYYGSDCKKFCSSSTNCSSNGVCTADGNACSCYSSYYGANCKTFCSSYSTCSSRGSCTANGTACTCNTNYYDYDCSKYCVASTTCSSHGSCAANGTCICNADYYGPSCSKYCSAASTCGGHGTCNSAGDCVCSGNFSLTTTPACSNCNSLFYGSTCQPCLCPSSRGTCNDTVSGNGLCRSCKSDTFATSICTPCECSMGGKCSSGPTGTGKCLYCNAANLYGNMCDKVRTCSANGEWVGGINQTEHAKPTISAGIVIPGKCNRIDCKCNDNTAGDGSCLGTCSVANFDFTKNCTKCIPNYYNASCAGDMCQCAVCPCVNGVCDSAGNGSCTTCRVGYWGLYCNQTCFCENALTTECRQRNGVCVAECKSGFWGTDCKNVCTCKNGQCRDGKEGNGACVTGSCVNNYRGTNCDEKCGCVNGNCDQTSPVGICLTKSGCSAGFYGKNCSAICDCVNGQPDDGIDGGGLCRSCSAGYYEKRCDANSTCVTSQGVAFEGIDGNGLCSSCKQGYVGPNCNVTCTCKNGVCNDSVAGDGHCKRGMCDNGFVGGDCDECAEGHFGKRCWQCDVCDTGYVCNATIQGNGRCVSASGTERPTASGDNASKSSGGVPVAAAVGGAVGGCVTALGSAFAIFHYREFIAKALSSGKWMAKRGANGSRDALAGSGDLDIEEATYMRGHELSQMTGKKSGDLLTPSADDDGGMRGHDLYATIDAEGIIEEIPRDRIRLGDNIGSGNFGDVWRGILDPDGLVTAVKSLKDGATAEQNRLFIMEAKLMAELKHRNVVRVLGIVTIGKPLLLVLEFMSNGSLLSYLETKRDDLSRKILMCMCRDIAAGMVVLERRGLVHRDLAARNILVDSDGTCKIADFGLARQLDSDYYVSTSSQKIPVKWTSPEAIKYRKFGTASDVWAFGVVCWEIFALGEKPYGQMTNAEAMEMIERGGRLAKPEMASDRIYATMASCWAAEARDRPSFIKLFSEFQGMILGQSRASQLPSGAGEGYVGA* # PASA_UPDATE: g508.t1, single gene model update, valid-1, status:[pasa:asmbl_9666,status:12], valid-1 NODE_849_length_16825_cov_30.0288 . gene 1246 6428 . + . ID=g508;Name=g508.t1 NODE_849_length_16825_cov_30.0288 . mRNA 1246 6428 . + . ID=g508.t1;Parent=g508;Name=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 1246 1479 . + . ID=g508.t1.exon1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 1246 1479 . + 0 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 1659 1886 . + . ID=g508.t1.exon2;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 1659 1886 . + 0 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 2204 2668 . + . ID=g508.t1.exon3;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 2204 2668 . + 0 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 3007 3079 . + . ID=g508.t1.exon4;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 3007 3079 . + 0 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 3258 3375 . + . ID=g508.t1.exon5;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 3258 3375 . + 2 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 3562 3758 . + . ID=g508.t1.exon6;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 3562 3758 . + 1 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 4002 4060 . + . ID=g508.t1.exon7;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 4002 4060 . + 2 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . exon 4277 6428 . + . ID=g508.t1.exon8;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . CDS 4277 5752 . + 0 ID=cds.g508.t1;Parent=g508.t1 NODE_849_length_16825_cov_30.0288 . three_prime_UTR 5753 6428 . + . ID=g508.t1.utr3p1;Parent=g508.t1 #PROT g508.t1 g508 MHRTLGVAPGPIKYQLKEVRAKLKEKDWKTQAHSLGLLAKRYVKARIPLISWLPTYAREDFFGDLVAGLTVALLVIPESLAYANLAGLPLEYALYASYIGCFVYVFFGTSSNVTVGPTAIMSLMTAQVLADYGVPEEQKGQSAIVLCLMMGIFQVGMGLLKVGFATKYISTAVISGFTSAAAILILVSQLGHFLGLPHVRKQIYFAIYDIFAEIGHSRWQDALLAIFCLVLLFGMKFLLTKFGETNKVVWLVCTSRNSLVILIACIISVVVAKVSFDWSEESSPLTVLGHLKSGLASPTPPPLTAAKFEEFWVGAFVLALVGYLESLAIAKTFAKHNNYRFRIEANQELIALGMCSILGSFFHSYPTTGSFSRTAVNAMSGSRTPANGVITGTLVVIAAYTMTNAFQFIPQAAIAAVIIASVVTKIDVKMFIYLWRVNVWDLLAFTVCFLVTLLAGIQYGVLFGLGTNLLIRLYWLALPRMAVLGRHPDRPFSFVPLAEFRNARQPRGVLVFQVQESLIFSNAAYIRDSIFKIERGRFTRSLSSDSLDLDALGISTQGAQRRLTDVGYAYEFEYRTLLEDWDSHVSSWEVGARRSSMTLSRQQSDEPNRATPVGDAGSAAQLARGSASGKTGKRRSAPEVVGDKIRRFSDFIGKRRPKRKAYERTPGELLDDQDNMSGGSEDDESLFGADMSVAGEPAGGDAGHSAYNVDADAGAASTAGGDVPSSAVAGPAVVNIGGFGDNAPPPPVPSTNPFAQDMNTHAAVDPAPHADHTAAGTTGGVGGDHDPFADLARRRAQAAATVDVSGASSSHLSVPTDGRASGVSSDADFDPRVMRGPEIMRSFVLDLSCVNDIDAAGIDVLRDVLTEFSSRDISFCVAAAKPHILRMLQNVAFLENFGTIYFFDTVNDAVMGCEDRDLHHGAVSGAQVYGKETGASYEFAAVPLVNLLD* # PASA_UPDATE: g12473.t1, single gene model update, valid-1, status:[pasa:asmbl_6465,status:12], valid-1 NODE_3733_length_2874_cov_42.7867 . gene 1 2536 . - . ID=g12473;Name=g12473.t1 NODE_3733_length_2874_cov_42.7867 . mRNA 1 2536 . - . ID=g12473.t1;Parent=g12473;Name=g12473.t1 NODE_3733_length_2874_cov_42.7867 . five_prime_UTR 2506 2536 . - . ID=g12473.t1.utr5p1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 2225 2536 . - . ID=g12473.t1.exon1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 2225 2505 . - 0 ID=cds.g12473.t1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 2047 2102 . - . ID=g12473.t1.exon2;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 2047 2102 . - 1 ID=cds.g12473.t1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 1651 1828 . - . ID=g12473.t1.exon3;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 1651 1828 . - 2 ID=cds.g12473.t1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 1198 1433 . - . ID=g12473.t1.exon4;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 1198 1433 . - 1 ID=cds.g12473.t1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 806 982 . - . ID=g12473.t1.exon5;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 806 982 . - 2 ID=cds.g12473.t1;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . exon 1 181 . - . ID=g12473.t1.exon6;Parent=g12473.t1 NODE_3733_length_2874_cov_42.7867 . CDS 1 181 . - 2 ID=cds.g12473.t1;Parent=g12473.t1;3_prime_partial=true #PROT g12473.t1 g12473 MVTPSSSNSRSLFGANDMFAFSGVGGGLVASKRNGAVYVGSPNYPSVGTGRVAEVPISPSQRAGAPTVLDAFNSRYNYKNPNPPPTSSVYNNGMYGATLAVGEFDGNANNGDELVIGSPRTTTSTMAFIGRVEIRVAKGLPTDNATVFTTEGEQPGALFGSALCVGDFNGDELDDLIVGAPNYVPTGAERRAFASFPSDVGRIYMYFSRSAGRLDSSVRTIISGLVPRGRFGFAIGNAGQSGLGGCDKCDDFVVGAPLVDSRGSVYYYTGATVIASTPTPLQEVKGDEVDGLFGYSFGRGDNIDSEGLRDIVVGQPGASGGKGKVVTLVGVVRTDLALSVAQINGVTRFLAGASMGFALTVTYPAVNSP # ORIGINAL: g1699.t1 original gene structure, not modified by PASA NODE_2289_length_6843_cov_42.246 AUGUSTUS gene 191 1072 . - . ID=g1699;Name=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS mRNA 191 1072 . - . ID=g1699.t1;Parent=g1699;Name=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 1059 1072 . - . ID=g1699.t1.exon1;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 1059 1072 . - 0 ID=cds.g1699.t1;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 867 953 . - . ID=g1699.t1.exon2;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 867 953 . - 1 ID=cds.g1699.t1;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 516 612 . - . ID=g1699.t1.exon3;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 516 612 . - 1 ID=cds.g1699.t1;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 191 365 . - . ID=g1699.t1.exon4;Parent=g1699.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 191 365 . - 0 ID=cds.g1699.t1;Parent=g1699.t1 #PROT g1699.t1 g1699 MVYEKPEKKRKREEEEAALAASKIPAGSVIAQFKNENGEATGPPLDLPLEISPEQLKILLNKLLQNDEEVPYAFYLNGEEIDSNVHSTLGKLGITSREITLDIVYQPQAVFRVRSVTRCTASMP # ORIGINAL: g1700.t1 original gene structure, not modified by PASA NODE_2289_length_6843_cov_42.246 AUGUSTUS gene 1875 5536 . + . ID=g1700;Name=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS mRNA 1875 5536 . + . ID=g1700.t1;Parent=g1700;Name=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 1875 2192 . + . ID=g1700.t1.exon1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 1875 2192 . + 0 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 2455 3265 . + . ID=g1700.t1.exon2;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 2455 3265 . + 0 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 3606 3806 . + . ID=g1700.t1.exon3;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 3606 3806 . + 2 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 3990 4088 . + . ID=g1700.t1.exon4;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 3990 4088 . + 2 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 4218 4295 . + . ID=g1700.t1.exon5;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 4218 4295 . + 2 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 4576 4707 . + . ID=g1700.t1.exon6;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 4576 4707 . + 2 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 5103 5208 . + . ID=g1700.t1.exon7;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 5103 5208 . + 2 ID=cds.g1700.t1;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS exon 5362 5536 . + . ID=g1700.t1.exon8;Parent=g1700.t1 NODE_2289_length_6843_cov_42.246 AUGUSTUS CDS 5362 5536 . + 1 ID=cds.g1700.t1;Parent=g1700.t1 #PROT g1700.t1 g1700 MSLGDLTEDGSFPNHSRSGSYDSDGVMGEKPRELVRAMYDSDGSTNGVTVVFSEGDIFRVVQRPGDGWVEVMMKNRARAFVPESWVETVSAAEYGTQRKRSLASASILSEDAPSESSTTSAACADTSSSASASAPPALPHRPHHRRTHSHAVAADALPDVLEDVTSGTSSGDALTAHAKEGPLERKVIVEGGKKLKKRGWTSVHAVLLTTGHLHLYKEEKDRRKGRKPLHSLHLAEESISATATEHKKRRMVIHVGSEADSFMLHNTSDSELQEWFDLFALACDGKLPLEADADFAESFSGPTDAGSKRTSLDLGSSMRNRSNSLKDKEKEKEREKEKKETEKKEKKEREKAEKEKEKEKKEEEKRKRKTSTNTAPTNLDDIGSAAQPLPSTPNERGHTRTPSTPIAIDPALAGPKVSNFKWLGNFLKARPKLEDLRRKGLIQNSVFGAELSEQIRREGEAIPIIVQKCVAYIEEKALDVVGIYRMSANALLVQKTAVLFNEDSRKADVSTLVDPHAVAAILKQYFRELSDPIFTDILYPRFMEVGRISDYNERLMATRTVVISLPLSYFTTVKFVFEHLKRVADKGDVNKMHANNLGIVFGPTLLRPVVPTAESIIQDTPYQCRIIEEMILNQEWFFN* # PASA_UPDATE: g14135.t1, single gene model update, valid-1, status:[pasa:asmbl_10190,status:12], valid-1 NODE_976_length_15194_cov_43.5839 . gene 8351 13961 . + . ID=g14135;Name=g14135.t1 NODE_976_length_15194_cov_43.5839 . mRNA 8351 13961 . + . ID=g14135.t1;Parent=g14135;Name=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 8351 8448 . + . ID=g14135.t1.exon1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 8351 8448 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 8661 8800 . + . ID=g14135.t1.exon2;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 8661 8800 . + 1 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 8931 9169 . + . ID=g14135.t1.exon3;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 8931 9169 . + 2 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 9287 9591 . + . ID=g14135.t1.exon4;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 9287 9591 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 9730 9955 . + . ID=g14135.t1.exon5;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 9730 9955 . + 1 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 10116 10282 . + . ID=g14135.t1.exon6;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 10116 10282 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 10497 10593 . + . ID=g14135.t1.exon7;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 10497 10593 . + 1 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 10741 10983 . + . ID=g14135.t1.exon8;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 10741 10983 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 11130 11351 . + . ID=g14135.t1.exon9;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 11130 11351 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 11470 11595 . + . ID=g14135.t1.exon10;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 11470 11595 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 11760 11997 . + . ID=g14135.t1.exon11;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 11760 11997 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 12191 12338 . + . ID=g14135.t1.exon12;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 12191 12338 . + 2 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 12523 12766 . + . ID=g14135.t1.exon13;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 12523 12766 . + 1 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 12923 13013 . + . ID=g14135.t1.exon14;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 12923 13013 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 13163 13683 . + . ID=g14135.t1.exon15;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 13163 13683 . + 2 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . exon 13858 13961 . + . ID=g14135.t1.exon16;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . CDS 13858 13923 . + 0 ID=cds.g14135.t1;Parent=g14135.t1 NODE_976_length_15194_cov_43.5839 . three_prime_UTR 13924 13961 . + . ID=g14135.t1.utr3p1;Parent=g14135.t1 #PROT g14135.t1 g14135 MSRFFATGNSDSESSVSESSDDEQAPVARAATRNFASDSEEDVKREVKSGKQKFQDALDKIYKDYKNAKKINDWTKVENGFDELSKLISKSQTVMSQFGTPQVFFRCVVDIDDFVRSTTENKETKDKMSKLNSKAFNSVKQKLRKFTKPFEEQMVKFRENPGNNVEEEETPATPAKKAPVKGAAAATSAKDESDDDDDDDSEEEVVVRKPAAKSPAAKAPVAADDDGEGSDDDDWGSSSESSSSEEEDTPKVLTREYFLKRTTDKDEDGNKKKEKKEKKKLAKKEKKVEEEDEGDAAESSAPKEKVDKPLFPEKTEITHDLVLKKLLEIISARGKKSTDRVEQVEILRKLRTISDTAGLGIGVSIKIQLNVISAQFDSNPVATHMAIDMWKNCYENIMELLAILNSNENLVLGSGIAEDDENLVDASKPYKVQGSIVAFMERLDDEFNKSLQAIDPHTTDYVDRLKDDIPLIKLIVEVQKYVERRAIVDDVCRTYLRRVEHLYYKVLRKPTIEGEDDVVVIDTLCKYIYAHDTTDRIRTRAMLCHIYHYALHDQWYKARDMMLMSHLQEHIQHSDVETQILYNRTMVQLGLCAFRFGKIKNAHYCLHDIESGGRVKELLAQGIVIQRNMEKNPEQEKKERQRQMPFHMHINLELLECVYLTTALLIEVPLIAHHKYDVKRRIMSKPFRRHWDFVDKQLFQGPPENTREHVIAAAKALLAGNWRQCQEYMLAIKIWNLFSNVESVKKMLSVKIQEEGLRTYLFAFNNVYDSLSLSQLEEMFDLPRATIHSTVSKMIYNEELKAMWDQPNEAIILHRAEPSRLQHLAIQLAEKASNLLETNERLFDARTGGYGYKDGGAQRGRGEYQNRGGRGGRGGYGGRGGYAGGGDNQRGDGQRGGYRGGRGGRGGRGGRGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGDRGDRGGYGGDRGGYGGDRGGYGGDRGDRGNNQQGGQGGQGGQGGQAGQAGQGGYQGGDRRPRDAGDFAQDGSFRGSGGYKRNSNIVSVDYDIY* # ORIGINAL: g14136.t1 original gene structure, not modified by PASA NODE_976_length_15194_cov_43.5839 AUGUSTUS gene 14496 14891 . - . ID=g14136;Name=g14136.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS mRNA 14496 14891 . - . ID=g14136.t1;Parent=g14136;Name=g14136.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 14775 14891 . - . ID=g14136.t1.exon1;Parent=g14136.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 14775 14891 . - 0 ID=cds.g14136.t1;Parent=g14136.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 14496 14630 . - . ID=g14136.t1.exon2;Parent=g14136.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 14496 14630 . - 0 ID=cds.g14136.t1;Parent=g14136.t1 #PROT g14136.t1 g14136 MTPHLIDSNALDVSGTFLFYAGFVVVMFFFMLFLLPETKGKSLESMGQIFHYTSLPEYARRNLKSHGEKGRHPTDLPNQALAV* # ORIGINAL: g14134.t1 original gene structure, not modified by PASA NODE_976_length_15194_cov_43.5839 AUGUSTUS gene 4234 7699 . + . ID=g14134;Name=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS mRNA 4234 7699 . + . ID=g14134.t1;Parent=g14134;Name=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 4234 4386 . + . ID=g14134.t1.exon1;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 4234 4386 . + 0 ID=cds.g14134.t1;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 4550 5275 . + . ID=g14134.t1.exon2;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 4550 5275 . + 0 ID=cds.g14134.t1;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 5622 5718 . + . ID=g14134.t1.exon3;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 5622 5718 . + 0 ID=cds.g14134.t1;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS exon 5895 7699 . + . ID=g14134.t1.exon4;Parent=g14134.t1 NODE_976_length_15194_cov_43.5839 AUGUSTUS CDS 5895 7699 . + 2 ID=cds.g14134.t1;Parent=g14134.t1 #PROT g14134.t1 g14134 MAGRLWLGILAILACSCATCRAAAPVLLSDTIGYQLHSFNDVRQWRQLILKGGDSAVFFKIDGHYGDPTFCASQKSLVNNGRLDARGCFVLVHDPPVAKQQYFNSHDVLDFVADPENAPLLRKKSASDDLPPVLLYFSWKCDETYPPVNGEHVNSLRNEWMRNLSSVISVNKLDVAVVSGCEGQPDAWCPDTPDFENPSSCMYVANTPDCVGTEVLNCEANPIPFNPPSKILRHLCTFGYGRFANASTAYPWVFYEPSDQGSVFELLDAYLDCGIMAPKGFRVAINIDPTQFQVTAATKSGIGLNEHLLQSFTLDTVKVAVAVCPSAVHHIVAFTENTTDGRLSHSYATAVSQPSGRAGLNKGPRALPTGDAFLAPIASFTAGPTPGTFVVSDGSDAAVVLAYDCATETLSIVSRIKLSDAVSNVYGLAALSSDKAGGFTIVYASTGSDCALYVGAEMASFSEISSIASGVCVLTSGNVTSASISATHLSSTKMSKDNDVCYQSGINGSAIAAVALSYSTSDSFVSVALLCIDAAAGVVRLASGPIPMGPGVETSISILSSVAENGQAVVAIAECHTGGFCFNSDWNNKRSFPLVCDATPTSMASVMNYNVGLWSDFVAQKETNVPHSTPCGSVVHGTYDLGTKPSVALYTRIDDSGISRLAISEVHDGFPTGAVDCHGCGFPNPFDGIVLDAWPLPSYMADGLQSVVSSRHPPMLFASADADIVQPASNVEAVDKCIMCIEVVQVARVAIQHDYALVAWLCDIAQRTCGITRLILGGGDKTACENFIFMYGPEIVVEALSAIFDSNDCKFFKICPASQSKDAVSGNTVPSWYSRRTHNTDTPQIAPNDGSLPGNALELSSFSSASVLSVLCDMARIEGGVNLSTVLEPLVDAWVVGSRSRIAKVVAEGIMQYVDAVCSGNHSRSV* # PASA_UPDATE: g14133.t1, single gene model update, valid-1, status:[pasa:asmbl_10191,status:12],[pasa:asmbl_10192,status:12], valid-1 NODE_976_length_15194_cov_43.5839 . gene 452 3843 . + . ID=g14133;Name=g14133.t1 NODE_976_length_15194_cov_43.5839 . mRNA 452 3843 . + . ID=g14133.t1;Parent=g14133;Name=g14133.t1 NODE_976_length_15194_cov_43.5839 . exon 452 1272 . + . ID=g14133.t1.exon1;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . CDS 452 1272 . + 0 ID=cds.g14133.t1;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . exon 1512 2496 . + . ID=g14133.t1.exon2;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . CDS 1512 2496 . + 1 ID=cds.g14133.t1;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . exon 2828 3232 . + . ID=g14133.t1.exon3;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . CDS 2828 3232 . + 0 ID=cds.g14133.t1;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . exon 3571 3843 . + . ID=g14133.t1.exon4;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . CDS 3571 3795 . + 0 ID=cds.g14133.t1;Parent=g14133.t1 NODE_976_length_15194_cov_43.5839 . three_prime_UTR 3796 3843 . + . ID=g14133.t1.utr3p1;Parent=g14133.t1 #PROT g14133.t1 g14133 MALTQKPHASDAFRRASFGGFPSRTNSASPIVRVSIRRTRAVSPYASDAIAGVRTLGAGSEDKNVMRDINLLASDPAHRLVRAFRSPASSALYTDLSEDAGYGNNSRPSSHLGFAPSPHSVRGSDEFNSEVGSSSAVSPASSTGRFGVPDLLWSMDDDEMPDKSLVDNSKDVSESSNFDEDAEDNNDDSAVVSPRKAPIDRMPIKLDESLVLLSIADDELRQSLADSALERHREFARAAELREHRVQASLQATATSNELRRERMQSRIAQEEARRSQAVQAALDQRNREAEESQRASVTQLEELITGTEVSKTEAGLAAARALFVKKEQEAAGIWKVSSDQGQKVSALFQPAIIDINDALKNARAACDDADAAIASVKKGGGATALAHMRSAAVKVDSLSKNVVTAHEALLAVVADVQAKITLHRQQQQQRSAEASGAPKDAASQIKPLANNAQPQGALAVVGDKKTVAPGVGGAGAGAGAVTAVAAGALTVVAAGAKAPRAVPKLKLPKEFVSPVAYEDYERRTAFWVTAHNSLKAFNEDKSLGRTRIDAKKIINTAINTISATADQVTAKIASIHALLKQSAPNQVMYNYCLDLFASKIVCQGDSQVHVHQASAFPIAAVTIGTCLLHPATTPLLMAHLYKKCPYIVPFYHPQKDGQRPEDYMREIGYEEAEEGVLETEEKYFERMSGIVALYAAMLQTPNQAVVSLDDGWAWLARVLNMPPRKITPSIILAFLQVAGPRLSQRFRNQFRKVLEFLREDYIPRMPQRTATAAIKRLEMFVDDALRNGRLPRPEEGLDDIFLRINTARIV* # PASA_UPDATE: g859.t1, single gene model update, valid-1, status:[pasa:asmbl_6250,status:12], valid-1 NODE_3588_length_3146_cov_40.3901 . gene 195 2920 . - . ID=g859;Name=g859.t1 NODE_3588_length_3146_cov_40.3901 . mRNA 195 2920 . - . ID=g859.t1;Parent=g859;Name=g859.t1 NODE_3588_length_3146_cov_40.3901 . five_prime_UTR 2546 2920 . - . ID=g859.t1.utr5p1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . exon 2543 2920 . - . ID=g859.t1.exon1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . CDS 2543 2545 . - 0 ID=cds.g859.t1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . exon 2076 2315 . - . ID=g859.t1.exon2;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . CDS 2076 2315 . - 0 ID=cds.g859.t1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . exon 1524 1683 . - . ID=g859.t1.exon3;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . CDS 1524 1683 . - 0 ID=cds.g859.t1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . exon 666 1252 . - . ID=g859.t1.exon4;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . CDS 666 1252 . - 2 ID=cds.g859.t1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . exon 195 270 . - . ID=g859.t1.exon5;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . CDS 196 270 . - 0 ID=cds.g859.t1;Parent=g859.t1 NODE_3588_length_3146_cov_40.3901 . three_prime_UTR 195 195 . - . ID=g859.t1.utr3p1;Parent=g859.t1 #PROT g859.t1 g859 MQHQEEWGKRNHKVDSFFKRTLSPEQYSKIRFFEPCILVSKEESKVFRYVLLSGESLYLTEYPPKKLHGFLKLRDVIGLELVQELPEFLQSEVGQNVEHIRIYFKKKRWAQLADALSDSLPNVHLAAAAKLDTEEAASPATARRRRYSQGRRYSLNGDDAPDPKKLTKDLPAQIAEEPAPSPASGFLAPPMLSGSSRSPSQQLLHGMHQRAQSEDSGMGNSFSALSVADLGGLSQSSRQSSANNLFAPGINLNGSGHGSMMSVAPLMRTKSSSGLKAQDSVEKEKGLSSKTSPRQRRGREDDVSSVNIYTLSSDSKLLLHLESALQNCIMRLTEQLDMEYLAQAEAAKKTAGHT* # PASA_UPDATE: g1326.t1, single gene model update, valid-1, status:[pasa:asmbl_6237,status:12], valid-1 NODE_3577_length_3167_cov_31.38 . gene 103 2929 . - . ID=g1326;Name=g1326.t1 NODE_3577_length_3167_cov_31.38 . mRNA 103 2929 . - . ID=g1326.t1;Parent=g1326;Name=g1326.t1 NODE_3577_length_3167_cov_31.38 . five_prime_UTR 2861 2929 . - . ID=g1326.t1.utr5p1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 2858 2929 . - . ID=g1326.t1.exon1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 2858 2860 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 2460 2531 . - . ID=g1326.t1.exon2;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 2460 2531 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 2146 2220 . - . ID=g1326.t1.exon3;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 2146 2220 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 1908 1979 . - . ID=g1326.t1.exon4;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 1908 1979 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 1684 1755 . - . ID=g1326.t1.exon5;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 1684 1755 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 1326 1397 . - . ID=g1326.t1.exon6;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 1326 1397 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 1054 1128 . - . ID=g1326.t1.exon7;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 1054 1128 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 767 838 . - . ID=g1326.t1.exon8;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 767 838 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 521 592 . - . ID=g1326.t1.exon9;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 521 592 . - 0 ID=cds.g1326.t1;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . exon 103 174 . - . ID=g1326.t1.exon10;Parent=g1326.t1 NODE_3577_length_3167_cov_31.38 . CDS 103 174 . - 0 ID=cds.g1326.t1;Parent=g1326.t1;3_prime_partial=true #PROT g1326.t1 g1326 MTYCPRVSGCISSSLKCDQQCPVPQVFCERVGKCVDSNLTCQTTACSGNDIYCDRVGRCVSTIQQCATACNGTDVFCANVGKCFAANSNCAVQCNGTQVFCGRLNRCLDASLSCATTCDGNGVYYCSRVGRCIESTLNCSSACNGTDMYCPNVARCLPVGTNCAVVCPPDLVFCDRVGRCVNSTSVCATACNGTDVYCANAGRCVSAGSDCRLVCPLSQ # PASA_UPDATE: g9955.t1, single gene model update, valid-1, status:[pasa:asmbl_3031,status:12], valid-1 NODE_1928_length_8494_cov_41.0423 . gene 121 1352 . - . ID=g9955;Name=g9955.t1 NODE_1928_length_8494_cov_41.0423 . mRNA 121 1352 . - . ID=g9955.t1;Parent=g9955;Name=g9955.t1 NODE_1928_length_8494_cov_41.0423 . exon 1181 1352 . - . ID=g9955.t1.exon1;Parent=g9955.t1 NODE_1928_length_8494_cov_41.0423 . CDS 1181 1352 . - 0 ID=cds.g9955.t1;Parent=g9955.t1 NODE_1928_length_8494_cov_41.0423 . exon 121 1024 . - . ID=g9955.t1.exon2;Parent=g9955.t1 NODE_1928_length_8494_cov_41.0423 . CDS 121 1024 . - 2 ID=cds.g9955.t1;Parent=g9955.t1;3_prime_partial=true #PROT g9955.t1 g9955 MADTVANAGGWRSLKPALSPIMVDALEAMGFSQMTPVQAAAVPLLMSNKDVAAEAVTGSGKTLAFVVPLIEILVKRHRDDPFKKRDVGAIVITPTRELAEQILEVLSALISRFPQFTAPMLLIGGGNPQEDVQKFLSDGANAVVATPGRLEDMVKRVPEFNIKRVELLVLDEADRLLDMGFEASVNEILSRLPKQRRTGLFSATQTEEVQALVRAGLRNPVKVTVKVEGATSHSQQKTPSTLSNYFVVCNSERKLSMLVSFLLANQAHKSIVYVCTCAQVDYFGRVLGRLPRLKGRVPVVMLHGKMPHPKRTESLKAFRSWPSGVLVCTDVAARGIDIPDVDWVVQFDPPQEPDAFIH # ORIGINAL: g9956.t1 original gene structure, not modified by PASA NODE_1928_length_8494_cov_41.0423 AUGUSTUS gene 1743 8270 . - . ID=g9956;Name=g9956.t1 NODE_1928_length_8494_cov_41.0423 AUGUSTUS mRNA 1743 8270 . - . ID=g9956.t1;Parent=g9956;Name=g9956.t1 NODE_1928_length_8494_cov_41.0423 AUGUSTUS exon 7275 8270 . - . ID=g9956.t1.exon1;Parent=g9956.t1 NODE_1928_length_8494_cov_41.0423 AUGUSTUS CDS 7275 8270 . - 0 ID=cds.g9956.t1;Parent=g9956.t1 NODE_1928_length_8494_cov_41.0423 AUGUSTUS exon 1743 7055 . - . ID=g9956.t1.exon2;Parent=g9956.t1 NODE_1928_length_8494_cov_41.0423 AUGUSTUS CDS 1743 7055 . - 0 ID=cds.g9956.t1;Parent=g9956.t1 #PROT g9956.t1 g9956 MKWTSQQSSADSAYFLECDTSANFESGTKQVTSFTPLSYAAGSFVHGQFLTLASLGVLPATAATSTLQSDRDDYFVWWDTGSGATGPLSGAAAVVRIDMSATSMNTGNDVCAAIVAALERANISKTMTNGTVNGSPVVKATCEGTGADLAIEQLTTGAVEVHQRLHRGTVVKIGALTSIAAGRGSTGANTSEYLTLSTTDATVTKGSATGGALYDDVRSIPGGAPSSGNWFLGNAKASTWEYFYFYNNGGCVDSRVANKTNVRVNRVDVSGLTSKEDVVSAVASAASKIDGFNISVGVGDPVKPKFIITSSPRSRLLDGSQFFIVDDTGALWTWYFDKSGSITAPRTNPTVRSGAFTRIDIRANAVTNTSANQIAMLIRDSINSAAGTPFNATVATEYGTPTITVTQLSATAASGVRGKMTIAALSASQMEPGVGGVITLTTLTGALIRVCIESEGMGDVGSRVLGSCKKSTLAANATIEWILATDATKDQLAGVLTAALNNPSNYPSGVAPFLAEQGVGTNNDKVYVWQRAAGLTPNRGVHTITVDAPSISSDGLTFNLVSQDGAFVPTFCFERTSGTCAAGTIKISRNDAYVSVRGVTAETDPIVTLDINHGFVNNDLIVFLETNDSGGISKLSQRAFRVLSKSGNQFKLGSNAPVTTTSSGTSGKAFKSAAALGRVNCSANTNTDATFTRTSHGLSNDDVIYFTGEASSGSNFAGGKLCLVAVQSTSTFKCKPALNAASETDVVYYRIAGSSQKVTVMFYTLGANPTITTAAAHKFEPGDVVVLPFLTASGSPADASVWQHKFFRVATVPTTTTLTLFPTITTTTSATGYMYRGIVEAYYGVAHGLKRAMDADPTFPLYFESYIHDTSSFNKVRVIQKQNGTLTPLYSHKITDNAASLAPSGTRFVLFDNGNNNRKIEFCIEHTTVGPGGQCTPSTSASNAVVELQTKNRLVSIGSGSDPTVTLESTLTNIGSGNIVAFFGVDGGGSVVNQRAFKTNMFSPTEFKLQPSVTMSTAATTGYVYDLTGVQKTAATATASSDTTFTGPADPSAINANDDVVYMPGTATAGTSFVSGVVCVVRNYNAQGSSADTWQCLGGRAASGTNTNVDYYLVSTAANKKNVTIGSGTTPLLTTGSAHTFKVGDLVVVDGYAGLAGAETAARMQNKLFRVMTMPTTTTLTLDPPLSSALTSTGATGYIWPVSTKEPQTSAMLEQVINTMRIPSLYPGGALPFVAAMTNSKYVFLQQKAVGTPMGRPYFTVTTDSVANTQDGGIFRFFLNDNSTVTVCFEKSTACNFAGAPQSVEVDITSVSTALEVAQRLAMSLHNANIAGIGDVAAGGTAVTVYFLPGTPPAKRPELFGTNAANSLCNSWAVSAFSTSYASAIGTYNVGGAYTASTWTIDAIVGPGYINTLGSSTSWSVSYADDTNNVFLSPATKASATFAQGTIDGGEMLGIAISSAYSSGTPSVTVANNVPGDLTPDATKGASLGTPTFVGVSGNTLDKQKAALPAKASISQGQALTFWSILGGLRKYAVQLYSSSFDFDAHPPSPLLNEIAVNVSDRPSTDMVALRLASAVDAVPGLTASIGKQQVEVTCDSAANTAHGLFFNFFAQSDGRQFVVWIDKGGSAPTLPAGATGVGIVLGAAVSTSDVAQKVQEALSNNAQFAAVFAVARKETDKVRVTQRQGGEVVGRARLRLVVDRADYSVAPDIGSNQIHLYSRGDEYVVCIKQIDGDCPIANSTTRVTIDCSATTACDAASKVANLLTTAINAVFGSAFTATLVGANVLCILVNANGVSSNAFIDWTSAWAIVNLVDSGQMPRQGVGSLDYDGGNGYQDGIFVGPSESIGAWRYKQTRRGSSSVYVEQHFTIDTIADMASLGTTTLMQMSTAYAGSMGMREFGTGITGRDAVSELYINDGRNATAMSGALAGFDTSLAGTSLYCRLWAASMDVSRPSGHSRACTLGGSVIGTLRNNDTATSRPIKMYAPRANFTAFDTAVVRVALPESKGNTGAWSNAITELQYMRCIAGRGGCESTILCPSVGSACPTLFAPAAVSSGFVLTSLQGDEYYVFRVRTHFPGGDWSDLSDASYAHDQPCLSALFDD* # PASA_UPDATE: g5415.t1, single gene model update, valid-1, status:[pasa:asmbl_10030,status:12], valid-1 NODE_931_length_15771_cov_41.5786 . gene 12572 15645 . - . ID=g5415;Name=g5415.t1 NODE_931_length_15771_cov_41.5786 . mRNA 12572 15645 . - . ID=g5415.t1;Parent=g5415;Name=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 15489 15645 . - . ID=g5415.t1.exon1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 15489 15645 . - 0 ID=cds.g5415.t1;Parent=g5415.t1;5_prime_partial=true NODE_931_length_15771_cov_41.5786 . exon 15193 15293 . - . ID=g5415.t1.exon2;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 15193 15293 . - 2 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 14794 14895 . - . ID=g5415.t1.exon3;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 14794 14895 . - 0 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 14504 14566 . - . ID=g5415.t1.exon4;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 14504 14566 . - 0 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 14168 14247 . - . ID=g5415.t1.exon5;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 14168 14247 . - 0 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 13708 13816 . - . ID=g5415.t1.exon6;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 13708 13816 . - 1 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 13474 13537 . - . ID=g5415.t1.exon7;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 13474 13537 . - 0 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 13007 13092 . - . ID=g5415.t1.exon8;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 13007 13092 . - 2 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . exon 12572 12782 . - . ID=g5415.t1.exon9;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . CDS 12678 12782 . - 0 ID=cds.g5415.t1;Parent=g5415.t1 NODE_931_length_15771_cov_41.5786 . three_prime_UTR 12572 12677 . - . ID=g5415.t1.utr3p1;Parent=g5415.t1 #PROT g5415.t1 g5415 IANSNLSEFGVLGFEYGVSIENPNTLPIWEAQFGDFFNGAQIIIDTYISNGETKWLRQSGLVMLLPHGFDGAGPEHSSCRVERFLQMTDSKVHSVDGDNVNMSVINPTTPANYFHALRRQLKRTFRKPLIVVGPKTLLRLPAAVSPLDDMATGTTFQPVLSDKVAPEGVRRVAFVSGKVYYELIKAREALPEAQRGETAFVRVEELCPFPAERLKEEIAKFTNAEKFLWVQEEPLNMGAWQFVEPRFEGLVGKKLQYVGRAPAAAAAVGVSKKHKEEVATLFNAAFNA* # ORIGINAL: g5413.t1 original gene structure, not modified by PASA NODE_931_length_15771_cov_41.5786 AUGUSTUS gene 3138 4355 . + . ID=g5413;Name=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS mRNA 3138 4355 . + . ID=g5413.t1;Parent=g5413;Name=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 3138 3221 . + . ID=g5413.t1.exon1;Parent=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 3138 3221 . + 0 ID=cds.g5413.t1;Parent=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 3440 3672 . + . ID=g5413.t1.exon2;Parent=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 3440 3672 . + 0 ID=cds.g5413.t1;Parent=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 3911 4355 . + . ID=g5413.t1.exon3;Parent=g5413.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 3911 4355 . + 1 ID=cds.g5413.t1;Parent=g5413.t1 #PROT g5413.t1 g5413 MAAVPLGKLAYLALRQVSKPIANYFKKQAAEHPFFRTQFVKFAQAYYRLEMAVKIRFMGHNPTAINPINESKAINLGADALGEMIVYSVASGLLISEYWKAQEKDKAKAAKVQQDFGEIREQLASLVQSIDKLQTENAELRDLFARTHVETEKNTRLITVQMPKGPNGTSSPPSPSTSSSPSDRNGASNVGSASGGSADSGYLSWLRVSVGSVFPSSSHGKSGVDSVVKSDDATRTDGAPSVPVTATTAHPPR* # ORIGINAL: g5414.t1 original gene structure, not modified by PASA NODE_931_length_15771_cov_41.5786 AUGUSTUS gene 4986 11955 . + . ID=g5414;Name=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS mRNA 4986 11955 . + . ID=g5414.t1;Parent=g5414;Name=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 4986 5705 . + . ID=g5414.t1.exon1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 4986 5705 . + 0 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 6127 6332 . + . ID=g5414.t1.exon2;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 6127 6332 . + 0 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 6657 6783 . + . ID=g5414.t1.exon3;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 6657 6783 . + 1 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 6929 7013 . + . ID=g5414.t1.exon4;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 6929 7013 . + 0 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 7190 7287 . + . ID=g5414.t1.exon5;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 7190 7287 . + 2 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 7567 8662 . + . ID=g5414.t1.exon6;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 7567 8662 . + 0 ID=cds.g5414.t1;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS exon 8801 11955 . + . ID=g5414.t1.exon7;Parent=g5414.t1 NODE_931_length_15771_cov_41.5786 AUGUSTUS CDS 8801 11955 . + 2 ID=cds.g5414.t1;Parent=g5414.t1 #PROT g5414.t1 g5414 MASTSPPSTLSSIRVGVRARPLTDREKDKDEQRQKFSVRMEGNKAVVLSGRSSRGVGVGASAAPVSASLASLAAQAQQDEKTFFFDHCFWSVEEDAVVDSDADQRRVYDALGRQVLDAALDGYNSCLMAYGQTGAGKSHSVMGTAAAPGIIPRLCADLFDYCASRGSPGVNGSDDAGSISSGKRISHVVEVGYLEIYNERVRDLLASGRGDVKDGVSVTGSGLRVREHPVTGPFVEGLTKIAVSSFADVEALLDIGNSSRVVAATRMNETSSRSHAIFTISFAETIFGDDIGAASEKTSKLHLVDLAGSERASVSGLSGIRLVEGGNINKSLTTLGLVISALATASTEKKQPFVPYRDSVLTWLLKDSLGGNSKTVLLAAISPSVDSYEETTSTLRFASRAKRVLNNAVINEDPNLKLIRELRQEVANLQSQLQVLTAQSGVRSPLTPTGPSIDPRNSLSPSTPSYSRQNSEDMSSMTSSADGTTMDVDALRMRLESSRKIVDDLSADWHESRRLRLLAAGSSGFTTPVGRGTLPSSTASRGASKQRVSRGAVPSQSSNGRATDAKGNDRRRESNVGVTCASSPIEAAEGPESILVGRVDRMDGGAIASGVGYYDEDIGEFSGAPGDAIAPDAMPESPSGAAPLSRGGSRVIRFGTSGAQLAWLSCDVSMSGVVVFPLAAGSVLAIGLSGQQRHLGMSLDAAGGSGDGGGGSGGTEEDMDEELFDVCVGVSTSASPRQLVSIEMSPDGRHATLVASPGVLCTVASRGMVSGSCALSQGDVIMVDGAHVFRYSNPDHVSNPTAPIASLADSPDSPVDVSGATVASSAIASSLELSAIAAALAQKHINDAQQTHGSQEVVVSTATLLRPAGVASGDGLSADAPSNATALHENVDSKAIGLGLGLGLGLNEEVVCACSESERSAQPHVSHCRDERCAEDVRCANSAADVTSIQPTPRTLESDSDSDDDNDSVYEEAVAEPMPGAPTKQSYGQDGVNNAHLGDACDNKEHTVAGDDSLHPSIAQMTQTHAPVDGGVSGQTTHDGGVGADAYMTRGGEGEETPGLAGLAPDVMVAGEAAALFEGGALDVTNDRNSVAAIDGVSPPTSAAPSVEVVSVSASVRAEDREKGDANAVLAAHIVHTASVAAWTDDNVAEEDERRREYRDDDRGATPSTGTLGDDSVSSISLSDSRAVLDRLIAHSAIFDTALPDTALTDAVLTHTTALSQAAPWANTNAQSAPLRASRLVVDDINYLPNDVVSSPSRVPLTSSDGHQSTRMDMASHVTSHVTFDATTTSVRNGDFRATTNAAGDYTPDMSRDPVGGATKKRAPSTIGNLEREISIVYDRLRMASTYTDHAPLVQKVVANGYTQGGSGSAPLSPQQPRSPSTPDSQSFGGVRPLSSGSASESRGESPAVQSVAPSVVSADTAATTRPLRGFSSPRDLSSLIAGAMDTRIADGTLGADTLSRLDALVLRFERGAVEPTQIDAVVHEIVELRLKAMLEEEAARARSAAARSQREGILVPTAHAANAGPDSPTTDVHNAGVVVSSAGPSSPQTPPITSRPSSRPTSRPSSRPSSPLATAHPPQTSSSTEAPSRALRPSSPLRRPMVLDGPSGSASSTGAPPYSPSAGAGHSALARRGSEGTADDSPPQSPGAGDAALSTPSIQSPMFAQENPPAWALSQLASQDDAAQSSMYVSITIPTVAGFVSPAGDRYNAFAVRVRCLDGEWVTWRRYSHFEFLKGAVTSKYPDIASSANPVFPPKKRASALFSFGSANQSAEFLDSRRQRLETYLAMVVACLVRRPPLSEGVNARRLIQVVPFLVDPSTKFVRTLPS* # PASA_UPDATE: g5412.t1, single gene model update, valid-1, status:[pasa:asmbl_10029,status:12], valid-1 NODE_931_length_15771_cov_41.5786 . gene 86 2722 . - . ID=g5412;Name=g5412.t1 NODE_931_length_15771_cov_41.5786 . mRNA 86 2722 . - . ID=g5412.t1;Parent=g5412;Name=g5412.t1 NODE_931_length_15771_cov_41.5786 . five_prime_UTR 2611 2722 . - . ID=g5412.t1.utr5p1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . exon 2258 2722 . - . ID=g5412.t1.exon1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . CDS 2258 2610 . - 0 ID=cds.g5412.t1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . exon 1575 1986 . - . ID=g5412.t1.exon2;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . CDS 1575 1986 . - 1 ID=cds.g5412.t1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . exon 1070 1333 . - . ID=g5412.t1.exon3;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . CDS 1070 1333 . - 0 ID=cds.g5412.t1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . exon 605 810 . - . ID=g5412.t1.exon4;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . CDS 605 810 . - 0 ID=cds.g5412.t1;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . exon 86 182 . - . ID=g5412.t1.exon5;Parent=g5412.t1 NODE_931_length_15771_cov_41.5786 . CDS 86 182 . - 1 ID=cds.g5412.t1;Parent=g5412.t1;3_prime_partial=true #PROT g5412.t1 g5412 MALRLSLCAIRRGAVSVFAGTARPQLTPPCNGHAPLTAAAAIFPFKSRVFSSHATSGLRMFHKTVLGLSPPTAVKIGVSATGLALAGILARGGWVSAVGATGKTCAVPFLRVAHCDARDSPPSDPQPIEDAPVEVGAPKSESSNARDLALLFHLLKHEAWLLFLAAATSFAVAVVNIRIPRLMGRLINVLSDIVKTGASGAVVDLAVFRAPAFGLMAMYGVQGLLTFVYITLLAVVGERLAERLRTRLFVSLLHQDVAFFDSHKTGELMDRLTTDVQDFKSAFKQCVSLGLRSTTQFLGSIFSLVAISGKLTLALIVTVPTVIGVGSVFGSMLRKISKKSQEQFSKATGVAEEAVGNVRTVRAFAMEDTEVARFVRESARARLLAEILGGGIGLFQGLSNVAINGTMLLVLWYGGTLVAMNEITPGDLMSFLVATQTIQKSLAQ # PASA_UPDATE: g3063.t1, single gene model update, valid-1, status:[pasa:asmbl_7722,status:12], valid-1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . gene 48 1123 . - . ID=g3063;Name=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . mRNA 48 1123 . - . ID=g3063.t1;Parent=g3063;Name=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . five_prime_UTR 1079 1123 . - . ID=g3063.t1.utr5p1;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . exon 1068 1123 . - . ID=g3063.t1.exon1;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . CDS 1068 1078 . - 0 ID=cds.g3063.t1;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . exon 750 846 . - . ID=g3063.t1.exon2;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . CDS 750 846 . - 1 ID=cds.g3063.t1;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . exon 495 551 . - . ID=g3063.t1.exon3;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . CDS 495 551 . - 0 ID=cds.g3063.t1;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . exon 48 152 . - . ID=g3063.t1.exon4;Parent=g3063.t1 NODE_4928_length_1136_cov_22.5099_potentialcontaminant . CDS 48 152 . - 0 ID=cds.g3063.t1;Parent=g3063.t1;3_prime_partial=true #PROT g3063.t1 g3063 MTKRFERAFKFNAHHVPRDWSVDEDISKAFIDARKKGEELLELFKSMRLTVDESQDASHEILSHAKLNELKDQYEQDIQPIFREALETQR # PASA_UPDATE: g5545.t1, single gene model update, valid-1, status:[pasa:asmbl_9495,status:12],[pasa:asmbl_9496,status:12], valid-1 NODE_809_length_17441_cov_42.0407 . gene 130 6449 . - . ID=g5545;Name=g5545.t1 NODE_809_length_17441_cov_42.0407 . mRNA 130 6449 . - . ID=g5545.t1;Parent=g5545;Name=g5545.t1 NODE_809_length_17441_cov_42.0407 . five_prime_UTR 6091 6449 . - . ID=g5545.t1.utr5p1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . five_prime_UTR 5687 5698 . - . ID=g5545.t1.utr5p2;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 6091 6449 . - . ID=g5545.t1.exon1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 5623 5698 . - . ID=g5545.t1.exon2;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 5623 5686 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 5156 5428 . - . ID=g5545.t1.exon3;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 5156 5428 . - 2 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 4602 4656 . - . ID=g5545.t1.exon4;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 4602 4656 . - 2 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 4280 4397 . - . ID=g5545.t1.exon5;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 4280 4397 . - 1 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 3319 3774 . - . ID=g5545.t1.exon6;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 3319 3774 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 3004 3140 . - . ID=g5545.t1.exon7;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 3004 3140 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 2705 2759 . - . ID=g5545.t1.exon8;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 2705 2759 . - 1 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 2212 2338 . - . ID=g5545.t1.exon9;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 2212 2338 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 1767 1941 . - . ID=g5545.t1.exon10;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 1767 1941 . - 2 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 1457 1610 . - . ID=g5545.t1.exon11;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 1457 1610 . - 1 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 1200 1247 . - . ID=g5545.t1.exon12;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 1200 1247 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 776 932 . - . ID=g5545.t1.exon13;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 776 932 . - 0 ID=cds.g5545.t1;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . exon 130 534 . - . ID=g5545.t1.exon14;Parent=g5545.t1 NODE_809_length_17441_cov_42.0407 . CDS 130 534 . - 2 ID=cds.g5545.t1;Parent=g5545.t1;3_prime_partial=true #PROT g5545.t1 g5545 MSGTPEEAKKKKKSFFRRKSLEEEAVVNDGPRHSMSSVYELDELKSKKSVHLTDDAYSPDKCLQSMRLGGSFLKWGENMKPQMYTLKIDAYNHLVMWRLAHKRLNEKSEKGSVEVAHIKEIRLGKPQKLRRLAEKYNIATDSLCFSIVHGTHLMDVNFINLVASSETAFKVWVTGLGALSQVARKQLTDPTMTWLKKQYLKLYDEKNDCFAMKNLITLFGKEKKADLKRAFEAMGIAYSKSTTYKPEEFPFDRFSTIYNHVNIRSDIASVFQVYTTGVRPYLTMQQFMTFLKREQGEGVDLTEARVSKIIQKFESIPSLSAQNHFSLDGFTKYLMSKENSIFKPLHRTVYQDMSQPLSDYFIASSHNTYLTGHQLRGESSVEMYIQVLQSGCRCVELDCWDGDDGEPIIYHGHTLTTKIKFEDVIRAIGEYAFETSPYPVILSFENHCSIPQQVKLAKYSVEILGDKLLTTFLEEEPEKLPSPEELKYKILIKNKKRQDPKPRPSAQVIAERGISVSTEDLSRASTSSMPFAAPAGRRASLQVDKMTRLSDSRRMHNRTASSLSNIPTVADEAAEGLSGTGENGDLLSPDGINGGGNFKGSNGSVDASASGSSVTRRASEALMPPASSELKRSISAEEGLGAIASRAAAAGSGGNTSDAVLSDDDGEGGDEADVSHSLMLAGQEADAEAGGDGALDRSGSAAAVAEQQYEPPKKGDQIAQELSDLIVYCQSVRLKSFLHSK # PASA_UPDATE: g5548.t1, single gene model update, valid-1, status:[pasa:asmbl_9493,status:3], valid-1 NODE_809_length_17441_cov_42.0407 . gene 13237 14772 . + . ID=g5548;Name=g5548.t1 NODE_809_length_17441_cov_42.0407 . mRNA 13237 14772 . + . ID=g5548.t1;Parent=g5548;Name=g5548.t1 NODE_809_length_17441_cov_42.0407 . five_prime_UTR 13237 13309 . + . ID=g5548.t1.utr5p1;Parent=g5548.t1 NODE_809_length_17441_cov_42.0407 . exon 13237 14772 . + . ID=g5548.t1.exon1;Parent=g5548.t1 NODE_809_length_17441_cov_42.0407 . CDS 13310 14503 . + 0 ID=cds.g5548.t1;Parent=g5548.t1 NODE_809_length_17441_cov_42.0407 . three_prime_UTR 14504 14772 . + . ID=g5548.t1.utr3p1;Parent=g5548.t1 #PROT g5548.t1 g5548 MADYTCRWASCAGTFDSSDALRDHVNRAHCVPCIPSPIPARPTSDYSSTVLGYEKTNWQGESTLPSSGNNSMPNVHRPRAHRSRREDTGESTARSLLMEPRYPPSIASHMAHALDGQDTRNHLRYDQRSESPITSCHGAFYPFSNPRCYSSNRPPPFTYTDSALCSSQCHDAYSHGNYDSYGGLPPPPGYFQAWLPDELPPPSHLGHASYPYYLPHQTTTALRGSPYEAHWAHSRGRYQGPICMPPPPLSNYDAVPVVANASSRAGKQRGATKPHLRRTRVKKAADSSIPSRHASPTDSPPFSPLSIASNGADSEAKVPEKKRRSSNSATHRRAGGRGREAVDACLRSTEDASELALTPDMTPPTHAAAGEQSAEDLAEFCCSLNLSAMRNLPHLVL* # ORIGINAL: g5549.t1 original gene structure, not modified by PASA NODE_809_length_17441_cov_42.0407 AUGUSTUS gene 15552 16475 . - . ID=g5549;Name=g5549.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS mRNA 15552 16475 . - . ID=g5549.t1;Parent=g5549;Name=g5549.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 15552 16475 . - . ID=g5549.t1.exon1;Parent=g5549.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 15552 16475 . - 0 ID=cds.g5549.t1;Parent=g5549.t1 #PROT g5549.t1 g5549 MASAAVLNPAAVMRRLSTTLASEENFLPRANYVNRVQRGEVRESMRDDVVEWLLKLNEQFEYSAETFFLAANYLDRFLSTVKVQPKHLQLIAICCFLIAAKVHEESEIAPSLQELVSAANWAFSAADIKRMEKIVLAKLEWQVTPVTSYSFLRQYRDALAADGILDFPAVSPVAGATIAPDGESEDDSDADDEPRGHGTAGVPFEFGAVRPHPRVRSYSTCEDPIDDILFRKITRSLAVCTCFYELLHFRPSQLALAVLVRELKAGDIEHVAAASALVASTGKGDASRLRECLDAVEYALADLEPAM* # ORIGINAL: g5547.t1 original gene structure, not modified by PASA NODE_809_length_17441_cov_42.0407 AUGUSTUS gene 9248 12122 . + . ID=g5547;Name=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS mRNA 9248 12122 . + . ID=g5547.t1;Parent=g5547;Name=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 9248 9621 . + . ID=g5547.t1.exon1;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 9248 9621 . + 0 ID=cds.g5547.t1;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 9779 10846 . + . ID=g5547.t1.exon2;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 9779 10846 . + 1 ID=cds.g5547.t1;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 11004 11257 . + . ID=g5547.t1.exon3;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 11004 11257 . + 1 ID=cds.g5547.t1;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 11655 11771 . + . ID=g5547.t1.exon4;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 11655 11771 . + 2 ID=cds.g5547.t1;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 11902 12122 . + . ID=g5547.t1.exon5;Parent=g5547.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 11902 12122 . + 2 ID=cds.g5547.t1;Parent=g5547.t1 #PROT g5547.t1 g5547 MARLYVGNAIAAAFDFTALNAGVGVWVRRPHIAQKSFGGATILKTINCVPRSSIESTLSAVKFELPKLIAGSGDSLATHDNAEETEDIVCSPHEDDSCASGVTHDDNNDGLTVIVRRLFPKLTERYSPYHEAVIIDRQGKEISFVYLPMPVDATAVTDSHSSQACKAEYRCPRVARYGMQLVEKSSGTPQATSDSHGSGDAATDHRGEELRVWVEDPDAFATENAVEDARDFKGMDWFVGKAIPKIVAWAEGHTETEARLSRPWMRFESLVDPEAYARRYSELKSKYGASLVNGWPEVTDPQKFVFEDIAISAYLLCLWDDERRQTGRQDLQSFVDLGCGNGLLVHILSLEGHRGRGIDVRARKIWSHFGPGTALEAFPFLPTEGTFPDTDWIIGNHSDELTPWIAYIAGKSSENCKFFVLPCCFFEFFGKFNRNDSRIGQYRTYLDYVRWVGEECGFVVESDAMRIPSTKRICQVGRKRSYAPEDAATAALRREAALSSSVNVHSKPKDGEGDVFSVRASVEPVRNCTRIDPSMKKAIVKAIVSVLVDREPAHLPNQRPIWRKGGTMHLSEGSAVLTPDMLAAMKCEFGGLQTLLRNHRHIFVVDKGCVSLRDYREEGYGDAAGPRKRQKTKNAAKAARDAQAVPAKHPCWFHFNHPDGCALSADACGHDHERAEP* # ORIGINAL: g5546.t1 original gene structure, not modified by PASA NODE_809_length_17441_cov_42.0407 AUGUSTUS gene 7435 8824 . - . ID=g5546;Name=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS mRNA 7435 8824 . - . ID=g5546.t1;Parent=g5546;Name=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 8369 8824 . - . ID=g5546.t1.exon1;Parent=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 8369 8824 . - 0 ID=cds.g5546.t1;Parent=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 8025 8265 . - . ID=g5546.t1.exon2;Parent=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 8025 8265 . - 0 ID=cds.g5546.t1;Parent=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS exon 7435 7655 . - . ID=g5546.t1.exon3;Parent=g5546.t1 NODE_809_length_17441_cov_42.0407 AUGUSTUS CDS 7435 7655 . - 2 ID=cds.g5546.t1;Parent=g5546.t1 #PROT g5546.t1 g5546 MGPKSRTQRAVDLEPLDLRVVDGPSPPNPWSVRTKRPLAPSSSFLAAEADSDGESVIDVATVDGPAPRRSGRARVVKSAADFDSPASAHEDGESGGKRSKVASRGGASSAGGGARGRMVGSAGKQRVRAVAGKARGEAPEDSNEDAEEEDEEDFVDVDADVDILKEADSEDDSTSVSSSLTDSGESSEADDNDSGSDEDGVEEEVDAEEGGNGVESDEESESAEKSPPKGRVDRPSKKRKVDDVGENAELRRSELVRKRKMMQEKQMEEAKVQTVQRLLNKQEPTTKRGDADKSVRSPVFVCLFF* # PASA_UPDATE: g6705.t1, single gene model update, valid-1, status:[pasa:asmbl_2207,status:12],[pasa:asmbl_2208,status:12],[pasa:asmbl_2209,status:12], valid-1 NODE_1635_length_10092_cov_39.36 . gene 11 8291 . + . ID=g6705;Name=g6705.t1 NODE_1635_length_10092_cov_39.36 . mRNA 11 8291 . + . ID=g6705.t1;Parent=g6705;Name=g6705.t1 NODE_1635_length_10092_cov_39.36 . five_prime_UTR 11 77 . + . ID=g6705.t1.utr5p1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . five_prime_UTR 359 642 . + . ID=g6705.t1.utr5p2;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 11 77 . + . ID=g6705.t1.exon1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 359 799 . + . ID=g6705.t1.exon2;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 643 799 . + 0 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 921 1022 . + . ID=g6705.t1.exon3;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 921 1022 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 1200 1617 . + . ID=g6705.t1.exon4;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 1200 1617 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 1960 2657 . + . ID=g6705.t1.exon5;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 1960 2657 . + 1 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 3039 3374 . + . ID=g6705.t1.exon6;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 3039 3374 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 3538 3693 . + . ID=g6705.t1.exon7;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 3538 3693 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 4033 4248 . + . ID=g6705.t1.exon8;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 4033 4248 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 4440 5586 . + . ID=g6705.t1.exon9;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 4440 5586 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 5770 6477 . + . ID=g6705.t1.exon10;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 5770 6477 . + 1 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 6571 7091 . + . ID=g6705.t1.exon11;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 6571 7091 . + 1 ID=cds.g6705.t1;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . exon 7342 8291 . + . ID=g6705.t1.exon12;Parent=g6705.t1 NODE_1635_length_10092_cov_39.36 . CDS 7342 8291 . + 2 ID=cds.g6705.t1;Parent=g6705.t1 #PROT g6705.t1 g6705 MARFDHVWLLVAKNLKIKRRRWAVAVEIVGPIVFFLIGAFVRLSVPPTAISEEIFPDDDIVPTKAFIAANATGIPLTIGFSPNAPWANSVMRTFKREAEVVIASRGLPSVVHVEGFPDELSMVSAARRQPSQYLANVAFEYANDSSAAADSPPAQQMRYTIRMCPDCSPKTTQQFARRLGSSYGPNPRVIYGQSGFLLVQRLVDAAIASEIAGVDLFGSMDIAFVRYPYPPYLRNRFAQGLGSILPLFMVLSWLLTVAMIVRDVVYEKEHRLREAMRMMGTSGAEHTAAWWITALSTVIVSVVIMTVLAKGGRVLAESDVGAVLVFFLLAGVASIAFAFMMSSFFTRANVGAAAGGVLYPIAYIPFLFVSNPNTYPTLQKAPKLFLCLLAPSCLGIGGQVFADFEERGVGVSFPRLQETEDYDGGVSLAEVYGMLIFDTLLYMLIAWYVDNVWPGHYGVGRPWNFFMTRSYWCGAKAKHSAGVYPSSAVKLMSVKADSWKEDPALVTDVHVPAGQAFTPICEPLPSGARVGVRIESLCKTYAGAKKAAVDNLCLDMCEGEITSLLGRNGAGKSTTIALLTGLFTPTSGDAIVHGSRITQDMDAVRASLGLCPQTNVLFEALTVEEHLAFFCRLKGVTHKDAVAAEVDAMVADLNLAEKRRSRAHTLSGGMKRKLCVGIALIGGSKFVLLDEPTAGMDPQARRDTWDLIIKNRHGRTIVLTTHHMDEADVLGDRIAIMAGGRLQCAGSPLFLKAAFGLGYHLTVVKKDDCDAHRVTATVHSFLAAAKLISDSGSELSYLLPSDDRPLYASLFRALDMELESLHVVSYGLALTTMEEVFLRVNEDASAREECGAEECGGDDGDRDWPAKAIVETVVIDEESAHTLPVDSPPACAGTACDATPPMAGKVAPQDALCTMPQQQRGGVARLSPGWRLTVRQAVAVFVKHGTEGVRDRKAVCAQLLAPVLFVLFAMVVAKAYPPPDSQPPLGLTIASVPAYALDGSSVGAGFPYGRTVVFQGDSMDAKGVALGAVAFMNSPTSNPFSSQWGSRANAPNFARELNGSAPSDMRRELLQTYNAKRNKFSSYGSFSVAQRSGGGGLNITVWYQNEAIHSSPILVNALTNALLLRANRTLSVGTTNHPLPQSADIRLDELNGQGTQFSIAVLFIFGMAFQSSYFVGPLVVERANGIKRLQFLAGCTAAPYWVGTLACDLVGSLASLGAVCIIIAAFGIPAYTGVNLGAIALLLLAYSVAEIGLMYVVSFLFRNPTSSYVTMTVANVLVGLATVVAVWALEVFEVSAGAIDTLKWAFLVFPPYAANSVADSIQTVSSFRGRSMGRGIVDIVQNSMLNDFRVQFSLGDGSDPLAWAIAGRNVVFLVASAFVYFVLVFAIEGKWFRCMSERSKRRLQDALLRRPVSPDEDMDVQAERARVACIGSVVGTAGGVEDAVVVRGLAKVYSGEGGDGARVAVDGLWCGMRRGECFGLLGVNGAGKTTTFGMITGALEPTSGDVRVCGHSVVVDPALACRNIGYCPQSDALMDSLTARELLLLFSRIRGIAQRDEDAAVNALLVRLELVRYADICCGVYSGGNKRKLSAAIALVGSPPVVFFDEPTAGVDAKARHFLLGAIGESAREGACVVLTSHSMEECEALCNRLAIMVDGRFQCHGSVQHIKNRFGAGYEVAVQTTAPIGLQEDMVDTLVLDVPPAESEANEENAVPYHRRERDCESSRAIEKRLSGAFPSARLVEAHNGWLFYEIADMVAGSLVDLFSVLENALSDGAVVDYSVSQTTLERVFIRFASATATRPH* # ORIGINAL: g5505.t1 original gene structure, not modified by PASA NODE_1662_length_9920_cov_61.903 AUGUSTUS gene 5034 5393 . - . ID=g5505;Name=g5505.t1 NODE_1662_length_9920_cov_61.903 AUGUSTUS mRNA 5034 5393 . - . ID=g5505.t1;Parent=g5505;Name=g5505.t1 NODE_1662_length_9920_cov_61.903 AUGUSTUS exon 5034 5393 . - . ID=g5505.t1.exon1;Parent=g5505.t1 NODE_1662_length_9920_cov_61.903 AUGUSTUS CDS 5034 5393 . - 0 ID=cds.g5505.t1;Parent=g5505.t1 #PROT g5505.t1 g5505 MVSEVIISPFPRQPSAPAIAIAIIMALLVAAGVGLPVAALGGVAWYYGWFRNIEFAEETFGGFTFIFREHVGPYKYVDGPIRKVLSDLRENGLERFIQNRAGKCQNPRQSPARQDGVGD* # PASA_UPDATE: g5506.t1, single gene model update, valid-1, status:[pasa:asmbl_2269,status:3], valid-1 NODE_1662_length_9920_cov_61.903 . gene 5741 8997 . + . ID=g5506;Name=g5506.t1 NODE_1662_length_9920_cov_61.903 . mRNA 5741 8997 . + . ID=g5506.t1;Parent=g5506;Name=g5506.t1 NODE_1662_length_9920_cov_61.903 . five_prime_UTR 5741 5870 . + . ID=g5506.t1.utr5p1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 5741 5911 . + . ID=g5506.t1.exon1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 5871 5911 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 6197 6224 . + . ID=g5506.t1.exon2;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 6197 6224 . + 1 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 6747 6839 . + . ID=g5506.t1.exon3;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 6747 6839 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 7049 7159 . + . ID=g5506.t1.exon4;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 7049 7159 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 7498 7671 . + . ID=g5506.t1.exon5;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 7498 7671 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 7881 8075 . + . ID=g5506.t1.exon6;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 7881 8075 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 8350 8539 . + . ID=g5506.t1.exon7;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 8350 8539 . + 0 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . exon 8708 8997 . + . ID=g5506.t1.exon8;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . CDS 8708 8850 . + 2 ID=cds.g5506.t1;Parent=g5506.t1 NODE_1662_length_9920_cov_61.903 . three_prime_UTR 8851 8997 . + . ID=g5506.t1.utr3p1;Parent=g5506.t1 #PROT g5506.t1 g5506 MATQDGKKVAIVGSGLIGRCWAMLFARANFYPVLFDIEPKQLEAASESVLAQLKGLESGGLLRGQRAEDVFARVSTTSNLRDALTGAIYLQECVPELVDLKKKIFGQLDELATELGNSEIVLASSTSCITASSFTEHLKHRDQCLVAHPINPPHYIPLVELVPAPWTRPSIVARAREILKAIGQSPVTLKKEVDGFVVNRLQYALLMEAWRLVEDGVCSPEDVDTAVSEGLGLRWSFMGPFQTIDLNAPEGVDDYCKRYGESIFRVCETQNDPRKFEGPAVSEIADAMRRQVPLDRLSQRREWRDAQLAALARHKLGMSEKKEE* # ORIGINAL: g2810.t1 original gene structure, not modified by PASA NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS gene 1074 1820 . + . ID=g2810;Name=g2810.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS mRNA 1074 1820 . + . ID=g2810.t1;Parent=g2810;Name=g2810.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS exon 1074 1820 . + . ID=g2810.t1.exon1;Parent=g2810.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS CDS 1074 1820 . + 0 ID=cds.g2810.t1;Parent=g2810.t1 #PROT g2810.t1 g2810 MTLDYIDSNNPDMDDATIAEPMNDTVTPPPSHPRTKTSKTPRHTPFFEGTPRRRKSPLFRDAPVADSSFLLRDGQVIDEPDNTFNDYVVNSLAAYNTSTYGNTDLNVDEHDAKMQLLYALAARTPHPSDFFAMVYGLSSTPPDALHPQCEPPASKTLTDAPSHQHHGTTPPEPPQPVETTLPLPPTTTSCSPDLPGTTSTSPPPTPSGNDPPHSPATPTTTASVAAINLHDLWVHSLTMSRAKRRKKFH # ORIGINAL: g2809.t1 original gene structure, not modified by PASA NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS gene 2 957 . + . ID=g2809;Name=g2809.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS mRNA 2 957 . + . ID=g2809.t1;Parent=g2809;Name=g2809.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS exon 2 957 . + . ID=g2809.t1.exon1;Parent=g2809.t1 NODE_4323_length_1820_cov_194.39_potentialcontaminant AUGUSTUS CDS 2 957 . + 2 ID=cds.g2809.t1;Parent=g2809.t1 #PROT g2809.t1 g2809 LNDSARRRLLTCLVRDGARETLDDLARLNPNFTYADARAALLKGYRSLNRVQALKDDFYRTPQQLTESTRDYARRKQSEAARIHEADPSSIISDDDLCTTFLRGMANEPLAILAMNERNVTLTRNRFRAADMQDPTTFEWLQQYVIQNELDYAAYQQSVRPSAANHAPGTPQGKAPRMHTQGHREVNSLLPAFTPPVPQPSHNSAGPSPEPAAVSNTSNRDDPSKRHKQKFGSPHRNDSPSGNPNRVSRPPIRALSQAAFADPDLFARISTFNGCFSCGQPDHRIDECPTSALHKSLHKDKGKGKDRSDAGDDHSKN* # PASA_UPDATE: g6802.t1, single gene model update, valid-1, status:[pasa:asmbl_4928,status:3], valid-1 NODE_274_length_28540_cov_42.6509 . gene 6652 10612 . - . ID=g6802;Name=g6802.t1 NODE_274_length_28540_cov_42.6509 . mRNA 6652 10612 . - . ID=g6802.t1;Parent=g6802;Name=g6802.t1 NODE_274_length_28540_cov_42.6509 . five_prime_UTR 10567 10612 . - . ID=g6802.t1.utr5p1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 10392 10612 . - . ID=g6802.t1.exon1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 10392 10566 . - 0 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 10112 10242 . - . ID=g6802.t1.exon2;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 10112 10242 . - 2 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 8995 9804 . - . ID=g6802.t1.exon3;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 8995 9804 . - 0 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 7755 8662 . - . ID=g6802.t1.exon4;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 7755 8662 . - 0 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 7318 7438 . - . ID=g6802.t1.exon5;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 7318 7438 . - 1 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . exon 6652 7045 . - . ID=g6802.t1.exon6;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . CDS 6881 7045 . - 0 ID=cds.g6802.t1;Parent=g6802.t1 NODE_274_length_28540_cov_42.6509 . three_prime_UTR 6652 6880 . - . ID=g6802.t1.utr3p1;Parent=g6802.t1 #PROT g6802.t1 g6802 MKESFLIADGEGGAAASVRYVRVSRTLLWGSWAAMILCVIGLTVALAVVAVDRKDSSDNCARAAAAAAASNAAVDQTSTEKYGVARVVSSNPVAVPACTQLKAAGQKINQRGLDLIKSFEGWSATYYLDAVGIKTIGYGHACHALPCPWTGSITKQQGETILKDDLVSFEKCVGDAVTSPLNRNQFGALVSFAYNLGCGTLRSSTLLKRINARAYDQAPSEMAKWVNANGGPLPGLVRRRKAEGDLFTSTDGCDAPTTAITRPTRGGESADTVYPRLAPGARSTATNRAVAVVQYLLANFLCITQDGVVTSDFTAFCPPTAVTGIYDDATRDAVIEVQRRNGIYPVDSVCGDSTWRALVNFAGGEGPTYIAKDAGGASTTAWAHYVVKAIQDVVHRTPAGAVSRAPTGVFDAETDAAVRAFQLANGVTDDGIVGRITWPLIAGVGYSAADFTAAVAVPPDGASTADLAQLPDVTAASQAKWLRTVQHLLCNALCPTASANARCVPASGVADAASMDAAKDVQTREGLLPADGSFSRGLLLQMVRAVPLLRLYSGYSASSPFRYAVMAVQAAVGVTEDGLYGPNTEAAVRSAQSSAGIAADGVVGPVTLLALIGGGAFSGCRPKVTVQGVSGLMSDVSVMLGRISCECFGGLEVVAFAVDGLDAAQRGASYYDFHRSGRAADFYVPALANETAIEDSLAITWSQLRKCSILTSQWETVLHGANTQTGAPHIHIGKGPGGFVGRWLSEGVVSAQFASPRGVYTLITASAFA* # ORIGINAL: g6806.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 25715 27566 . - . ID=g6806;Name=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 25715 27566 . - . ID=g6806.t1;Parent=g6806;Name=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 27501 27566 . - . ID=g6806.t1.exon1;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 27501 27566 . - 0 ID=cds.g6806.t1;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 27211 27318 . - . ID=g6806.t1.exon2;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 27211 27318 . - 0 ID=cds.g6806.t1;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 26844 26946 . - . ID=g6806.t1.exon3;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 26844 26946 . - 0 ID=cds.g6806.t1;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 26059 26284 . - . ID=g6806.t1.exon4;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 26059 26284 . - 2 ID=cds.g6806.t1;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 25715 25826 . - . ID=g6806.t1.exon5;Parent=g6806.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 25715 25826 . - 1 ID=cds.g6806.t1;Parent=g6806.t1 #PROT g6806.t1 g6806 MADLTNIAPALVIIFIAVYGGLAGIVFLLWGYRQAFRLVMLRRPPQRRSHLAWTGIPTEVRNEIARNLARSATTNAEPKPEDSERHFGWGYRENVVADSAHAHLQRSPRQSFRDWVSSIQRHIPALEPCAHLIIPLVDVYDVAAFGRREFSADEWQRYQKLVGLIAQRIRGETPDLEDEMGVFKVDPAGSVSFLVEGALSHSNV* # ORIGINAL: g6803.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 11394 16744 . + . ID=g6803;Name=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 11394 16744 . + . ID=g6803.t1;Parent=g6803;Name=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 11394 12841 . + . ID=g6803.t1.exon1;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 11394 12841 . + 0 ID=cds.g6803.t1;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 13115 15176 . + . ID=g6803.t1.exon2;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 13115 15176 . + 1 ID=cds.g6803.t1;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 15417 15567 . + . ID=g6803.t1.exon3;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 15417 15567 . + 0 ID=cds.g6803.t1;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 15845 16044 . + . ID=g6803.t1.exon4;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 15845 16044 . + 2 ID=cds.g6803.t1;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 16406 16744 . + . ID=g6803.t1.exon5;Parent=g6803.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 16406 16744 . + 0 ID=cds.g6803.t1;Parent=g6803.t1 #PROT g6803.t1 g6803 MVQMEGHAPIQNAWALSSGAWDSLPVDVDNDMPLGAEAMDMEPLANALNLDSPGGLLPPEAAQNPISLRFSVAELEDEYNAYISERHLKALRVANVCAVALFTVFFGSMVLSMLGETDDLKRRYHDTSYFQAASAGLSALYFIFMFTKLYRRMFATFRLLAYLVIFALVVISLFLPRGLAGDGRFSSACILSVISVVLVMGQFSHASMYIVLCVAGLVVQISVTSEDSPGRILSILLPGVSASLFPLLAIYLTDRQMRRVWLSKRAFNVRHASLDEEKEQMEKLLRLQLPGPILALMRQSHESQSLSRSVPSACVVFVELYGWADTSSKLAPADAVAVLNLIFTRFDTLAERYAIEKIKTIGPIFMAASGLTNTVDHVTAVARFAMRLMREWRDWKSRTFPIASSVMASGDIGGSVGVGLGGRHQSMDLSSSVSNSSRLNLNQLLSDVSLKIGVHVGEVVAGVVGDLKFCYDIYGDTVNTASRVCKFGAPNHVRCTAEVKDYLNPNDFRIESMGMSEYKGKGLMETFDIAPSKAPSRKRRESALVHRKSELGSSIGRLLKTRGIKPALDNGGVTEGDGCDSPVSLSLSHGDGLDTIGQKTNNDSSEDNREPDDAFVESHGQGTPRRKRSASIGTAEEAIAATLRRGSVRPIARRFAALTEALNRSESSLYSSASSLGGSVPFVPVAKPDAIDQKALFNRMTMQRRGMTEGVTPQQSGQNSADALPNAVPDVGSVVVDVDQDTNNRSDMSSSQINLPSFVPLSSSNGFAGPRSLPESRGQLKSASVSAVDLGQSRVITGSKSSLGSAALATLTAAALAAAGAGPSAHSTTNMSQARARSLAIGSGGSDPSRRSSRSLSLSTQMPIDIPAFSRADALTEALKAKVDDLDTRIEAKGRLSRVTLRFHLEEVETRFRIVMATRRGQETAFHMLMSWALMLVMVTPDIASGASSSLRLALVGARLILGSVVCLVPAFIISRTEGMAIVGKQVNDDMRSIASSPLYMGRYTRDQRVRRVLWSTIAFEFSYAALMVLLCLANRDLNNTAFCHVCAVVLYVCCVIASAPSFLFVHLLWIFAGMIIAMFGAKLFGLTNVGISTIGLAIFGILITVAARYRYEKFVREQLVVDLVTAEQERDLVREKGVSEELLHNILPPSIAKQLAANPDSDTAMHLTEVTVLAMDVISFTARASAMTAEEVVALLNSLFNMLDSLVKNLGGIEKICTIGDAYIAASGVPEPVADHAERVCMLAMDMVRAIMGYNLIRASTSKFDPVRVRIGVHSGGCVAGVMGGKVRVKFDLYGDAMDTAVRLEQTGQPLALHISSETIRRLQTLEIFPECSFVLEQSDPLTDSGLPTYLARPTVAMSTASVRGSESPKFRASIAPSITVPTLTEAHSHEMLDAMLV* # ORIGINAL: g6801.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 2964 5654 . - . ID=g6801;Name=g6801.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 2964 5654 . - . ID=g6801.t1;Parent=g6801;Name=g6801.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 2964 5654 . - . ID=g6801.t1.exon1;Parent=g6801.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 2964 5654 . - 0 ID=cds.g6801.t1;Parent=g6801.t1 #PROT g6801.t1 g6801 MSVIDGGLARDQAGDGGRATASYANIDETLLYEICSHEVLDPIDLCHLAATCKALRVLVAKVIAIHYPQLLARGRQHALAFAVEHGSSCESTTFHLWLGALSPRDPAGHPVAGFLSREFLAIVNERARRIAWTRVARDYVHLRGVPNGWRAEDYDKAEAALAADPGAGGETALAYVRRTRKAHLHCSTTHPFGQCDTDIQRALFAGIDVDIGGATERLNSEALSNAVSVCGANVDLAHRRSSPDAWHGLWELDAVSRPRIESLSNSHAESGAGIHRWLAAFSPGAVPDSADAFEALRTLEVLRWRTAVLSPRARTVAGYRAADYMFRIGADPATALHVWVRGQDEMNDLPALYYRNELLRLAQNSQRAPKVDADWNDLGDLEEGKPFVSGLPDGHMLSRARVLFRVGPHGPFAEGIACGFGRRNDPNQGGYVTYWGSAVEGIVFPVGRQEMSPAFVDACAAALCHLSRERAFGVVSIAASLVFGSTLDCGKVVPGRNNFVVDERTGRPQRLRWFLNRAKAADGKTAAPSPSYPPGDLLSALDVDDARFLRTVAVDRASFRWPPNKGRDAPPFWQAPQGTRRRETEGFLGDSVYCNTMFWHFLSGIAVDLALGTVRQCPGEDGSTTLQHSVAAHVCTISVSSGQSDYAIVKDASRVIASEDLCVCGENYFGDFYDGQTWNCDADTSDGAHVDAWDAPGGRAMADPAREVRRLHAMNTYPTPVGDAVEALRAYFTGAPGDKPYVFPADPDESDAEESSEESSEESGDSDGSEDISLGSESYKNSQEEENRDDYSALVDRRDSLWRNPPPNPAWSEDELDLGIGNTARAMWHAAAMPGSDANGVSNSGADDDDEDEESDSDTFGFRVHERCTLADDVDSLGKDSLPDMDVAVTDDNFLD* # ORIGINAL: g6799.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 42 580 . - . ID=g6799;Name=g6799.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 42 580 . - . ID=g6799.t1;Parent=g6799;Name=g6799.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 494 580 . - . ID=g6799.t1.exon1;Parent=g6799.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 494 580 . - 0 ID=cds.g6799.t1;Parent=g6799.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 42 159 . - . ID=g6799.t1.exon2;Parent=g6799.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 42 159 . - 0 ID=cds.g6799.t1;Parent=g6799.t1 #PROT g6799.t1 g6799 MQSRGTDASVPVWASSILQIQFLSFPVLDVTWGLIVARRFRVADYRGAGVHQVFVSYLISILAGSFIV # ORIGINAL: g6805.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 20323 24242 . - . ID=g6805;Name=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 20323 24242 . - . ID=g6805.t1;Parent=g6805;Name=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 24140 24242 . - . ID=g6805.t1.exon1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 24140 24242 . - 0 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 23618 23917 . - . ID=g6805.t1.exon2;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 23618 23917 . - 2 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 22393 23376 . - . ID=g6805.t1.exon3;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 22393 23376 . - 2 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 22050 22209 . - . ID=g6805.t1.exon4;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 22050 22209 . - 2 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 21456 21741 . - . ID=g6805.t1.exon5;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 21456 21741 . - 1 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 21205 21316 . - . ID=g6805.t1.exon6;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 21205 21316 . - 0 ID=cds.g6805.t1;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 20323 21029 . - . ID=g6805.t1.exon7;Parent=g6805.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 20323 21029 . - 2 ID=cds.g6805.t1;Parent=g6805.t1 #PROT g6805.t1 g6805 MASTLPIDRTAAASRTLYVAVALALLFAAVPDSAGLPLPTAQADVAVSGHPSPNDSAPIIDPIAQTLSSVRCCQEDDYSIIVGYKCRYNLATGPKTWTVQGLSDNGKAVRHQTCCRSGYGTPTSSDATFPFVCADAPANVSIPLGSFGCSSNHTCAGNAICVRRSMEQKVNTYGGRCECASLGDASYGNGTCVWDYGSVPAGKVVSSAKGCRSQRSTPFSATDSVCMPNTCNCVSPDDENYTPTSYVVDDRCKCWTSNVPFGKRVLLSSSCSTGYSVPTGSDKWETCVCPSPDDVPDSADGKCKWAAGSIPHGKRVYAKWGASGCASRWADATRNDTSNKTSTVTCGCVSIDDPLTAATDARCGWSSAASVPNHARVPSGLAKYCKSGFSFAENDSGARDVCACASAEDEAFLSGLTDVCTWAAGMVPPRYHVKDITRCFFQPGNATLSAAILNKNGTVACPDPTYTSPEDLMAKINTITSSYDKGYWAFAEGTAHLQCYKTVSLKLTSNQHDSIRDRYASDGISSQYAASWKASLSNEFFVNLVKAELHTSCDENCRKYVFGVLFEEFTALTAMAGLFSMTKVALDSQDRTYQANVDLAKQTVQAEDTSEVKPAQGFGNFVLGVFSTICSAAAKTFFKTNLIAKFSLYVASGVLTELKTTTTPEEYDTNASSEVAAAQLKSELNERYLKLLAAYTRSFGTLTSSPLKMRMLSVIHNTYDATTESDIAEQIVAQQPAVLASLVRILFPAKWHLCQTQTQYIEYRDVEYGGGGTTVEVVWDQCSRSASQAYEKLIPADKKVDVTDLVDLAEQYGDIAIAWFCPDGRFADGKTVSMSTFESAGVDKDSVATFHKELVRAVLTHDASVELSGWGGFNVQSPCPADK* # ORIGINAL: g6800.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 1060 2688 . + . ID=g6800;Name=g6800.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 1060 2688 . + . ID=g6800.t1;Parent=g6800;Name=g6800.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 1060 2688 . + . ID=g6800.t1.exon1;Parent=g6800.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 1060 2688 . + 0 ID=cds.g6800.t1;Parent=g6800.t1 #PROT g6800.t1 g6800 MADARLTESAFDRALRLFHAPPFDRWAALAAFQEALVADSTTEDERARATIYVTAYNIDPCFTTMAFPKFTRVHEPRELPENVKKWVAAMSQRCVGKVEEWWDAIAAACPPAPHGLDGPAIIAFELHTCSKRDCWDKVYISAAVARNLPAAVLCMGRLQSHISSYDSQREAVRLLSAAVNMGHPGAEIELGYLENIYEVSEGMRRRLAWYRRAARRGDAEAMWLLAEANANKRAAAAFRWYLRCAERGHGPSQEMVGLRYLTGNGVARDGTAAAQWLERAADNGRAECLAVLAAMFFSGRGVDADSARAMVYYERVVALPQSAFVKVHRNSWDPVVLTHPALPPTSRVLGMHLVAAKAGVVRAMYVVGLCLGEGHLIKRNLKASDDWLSRAAAAGSSDALAALGNAAALQNDLKAAAALYWRAHEAGSAEGSFFAGVCYERGYGIASDGDVAVTCYRAAAERGDDRGAFNYAAAQLAGWHTAQDTVAARRAFIACAERYKGKTRAAKFAAALLVGSDSGGAPGDPSAAISILMDRVGGSHAF* # ORIGINAL: g6804.t1 original gene structure, not modified by PASA NODE_274_length_28540_cov_42.6509 AUGUSTUS gene 18459 18939 . + . ID=g6804;Name=g6804.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS mRNA 18459 18939 . + . ID=g6804.t1;Parent=g6804;Name=g6804.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 18459 18611 . + . ID=g6804.t1.exon1;Parent=g6804.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 18459 18611 . + 0 ID=cds.g6804.t1;Parent=g6804.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS exon 18850 18939 . + . ID=g6804.t1.exon2;Parent=g6804.t1 NODE_274_length_28540_cov_42.6509 AUGUSTUS CDS 18850 18939 . + 0 ID=cds.g6804.t1;Parent=g6804.t1 #PROT g6804.t1 g6804 MNNQQQQGGQAGRQGQMPDTAPTKPFSEAQGLKPQLHDNINAAGRGGQDSEGKVQPNAAQDKLQKGAQGGGKMEQQQKKP* # ORIGINAL: g7730.t1 original gene structure, not modified by PASA NODE_3223_length_3969_cov_42.7458 AUGUSTUS gene 2306 3851 . + . ID=g7730;Name=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS mRNA 2306 3851 . + . ID=g7730.t1;Parent=g7730;Name=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 2306 2429 . + . ID=g7730.t1.exon1;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 2306 2429 . + 0 ID=cds.g7730.t1;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 2798 2882 . + . ID=g7730.t1.exon2;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 2798 2882 . + 2 ID=cds.g7730.t1;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 3117 3488 . + . ID=g7730.t1.exon3;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 3117 3488 . + 1 ID=cds.g7730.t1;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 3653 3851 . + . ID=g7730.t1.exon4;Parent=g7730.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 3653 3851 . + 1 ID=cds.g7730.t1;Parent=g7730.t1 #PROT g7730.t1 g7730 MSHPPYHHGMAHGWQGPPPTDPSRMLMNILNVGGQPMQMQHGYPMPMPSHEQSQNANDLARFFPHLPMGSQMPHPPHTPHPSFEGTSVPSDMGPALMSPSSLERSDNTFDYGSRSSAPSIETLQAHERQSAKQLATQQSSGSASSTTTAASTKPVSQPTKPAPSALAPAVRQPSISVPPPLNPLPPLAEPSGIDDDAAVAYAFSGSVIEFPLEATQNPIANANKASATAITHYQSEPGYYVGKTLAISRAYVAYAVKCG* # ORIGINAL: g7729.t1 original gene structure, not modified by PASA NODE_3223_length_3969_cov_42.7458 AUGUSTUS gene 1 1323 . - . ID=g7729;Name=g7729.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS mRNA 1 1323 . - . ID=g7729.t1;Parent=g7729;Name=g7729.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 1140 1323 . - . ID=g7729.t1.exon1;Parent=g7729.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 1140 1323 . - 0 ID=cds.g7729.t1;Parent=g7729.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS exon 1 851 . - . ID=g7729.t1.exon2;Parent=g7729.t1 NODE_3223_length_3969_cov_42.7458 AUGUSTUS CDS 1 851 . - 2 ID=cds.g7729.t1;Parent=g7729.t1 #PROT g7729.t1 g7729 MEGDGRRMSVVGAPDDKVFNFGVFLYKMLGAQRRILQLDFQAKVLCNIKRGARDKKFDFSQIESVDSEDGLRFFIYFQDATTYEYDADSFQEKNRICRLINFIVEQNKKEGGIGDFDSAEDFHKQQQQLVIKEGEVEKQGHSVSIMFWSRRWLRVTEKEVSYFKLDDKDNALNIIQLDLTVASFSKFDNNGFSVRTNKKQWHFRIPASPDKTPEQIEQMRDEWYDSLVATARVRMGGVAEKVSLRIGGLAMSLQDQLRSLVDAFNQSGQRDPAMESKIRDICAVAASIGREVTAPKKAVKTTISMALAPQATDGDLSDSSSSSSIPPPPGGAGPPPPPPPMGGGG # PASA_UPDATE: g3232.t1, single gene model update, valid-1, status:[pasa:asmbl_8139,status:12], valid-1 NODE_5529_length_818_cov_28.0027 . gene 88 633 . - . ID=g3232;Name=g3232.t1 NODE_5529_length_818_cov_28.0027 . mRNA 88 633 . - . ID=g3232.t1;Parent=g3232;Name=g3232.t1 NODE_5529_length_818_cov_28.0027 . five_prime_UTR 633 633 . - . ID=g3232.t1.utr5p1;Parent=g3232.t1 NODE_5529_length_818_cov_28.0027 . exon 390 633 . - . ID=g3232.t1.exon1;Parent=g3232.t1 NODE_5529_length_818_cov_28.0027 . CDS 390 632 . - 0 ID=cds.g3232.t1;Parent=g3232.t1;5_prime_partial=true NODE_5529_length_818_cov_28.0027 . exon 88 202 . - . ID=g3232.t1.exon2;Parent=g3232.t1 NODE_5529_length_818_cov_28.0027 . CDS 88 202 . - 0 ID=cds.g3232.t1;Parent=g3232.t1;3_prime_partial=true #PROT g3232.t1 g3232 VLHQVQYLGLKENINVRRAGFAYRQLFEKFLRRFAILTPETFPSWTGSPAEGVKFVLNKVDMDPSQWQMGKTKIFIKSPESLFLLEELRDRKYDQAARRIQRAYRLWKSQKHYMELKQK # PASA_UPDATE: g9507.t1, single gene model update, valid-1, status:[pasa:asmbl_1181,status:12], valid-1 NODE_1317_length_12171_cov_41.4005 . gene 4272 4984 . - . ID=g9507;Name=g9507.t1 NODE_1317_length_12171_cov_41.4005 . mRNA 4272 4984 . - . ID=g9507.t1;Parent=g9507;Name=g9507.t1 NODE_1317_length_12171_cov_41.4005 . exon 4870 4984 . - . ID=g9507.t1.exon1;Parent=g9507.t1 NODE_1317_length_12171_cov_41.4005 . CDS 4870 4984 . - 0 ID=cds.g9507.t1;Parent=g9507.t1 NODE_1317_length_12171_cov_41.4005 . exon 4272 4625 . - . ID=g9507.t1.exon2;Parent=g9507.t1 NODE_1317_length_12171_cov_41.4005 . CDS 4423 4625 . - 2 ID=cds.g9507.t1;Parent=g9507.t1 NODE_1317_length_12171_cov_41.4005 . three_prime_UTR 4272 4422 . - . ID=g9507.t1.utr3p1;Parent=g9507.t1 #PROT g9507.t1 g9507 MGLSAGVGTQWSYAVAAQAQAIKERATLSTERGLLANAVPESAPPAHALSLPTQPVTVTRPGLVPAAAGAIRPALSHVTGMVLSGGVQHQVSRPPLTSDHIHSGQ* # ORIGINAL: g9506.t1 original gene structure, not modified by PASA NODE_1317_length_12171_cov_41.4005 AUGUSTUS gene 1816 3819 . - . ID=g9506;Name=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS mRNA 1816 3819 . - . ID=g9506.t1;Parent=g9506;Name=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 3720 3819 . - . ID=g9506.t1.exon1;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 3720 3819 . - 0 ID=cds.g9506.t1;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 3104 3375 . - . ID=g9506.t1.exon2;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 3104 3375 . - 2 ID=cds.g9506.t1;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 2627 2807 . - . ID=g9506.t1.exon3;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 2627 2807 . - 0 ID=cds.g9506.t1;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 1816 2111 . - . ID=g9506.t1.exon4;Parent=g9506.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 1816 2111 . - 2 ID=cds.g9506.t1;Parent=g9506.t1 #PROT g9506.t1 g9506 MATQVNSGGRCAVMMFVFVVVAAIQALPFVNADGYIHAGKVDFTCVTTVDLSGGAAHKVDGPGDATISCKILSDDGTTTFSCSGRYIVKEPSEGEVVALSFKFGKTVDQADYLVARVDSTGEVHVVFASDDSGTETITAGGELVAPKPSAEALSGGRYVSATLSTESLVCRVSVQPFFILKETPVGECDKLIIGGPKSPTVFVATSASLTKFDGQIEAGVAEFIQHPFTGLTVGNEYVMFSIKTLKDCSCIEGPPIYTLSDDDEKYLLCSSGNLPIAHVVSL* # ORIGINAL: g9509.t1 original gene structure, not modified by PASA NODE_1317_length_12171_cov_41.4005 AUGUSTUS gene 8884 9267 . - . ID=g9509;Name=g9509.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS mRNA 8884 9267 . - . ID=g9509.t1;Parent=g9509;Name=g9509.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 8884 9267 . - . ID=g9509.t1.exon1;Parent=g9509.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 8884 9267 . - 0 ID=cds.g9509.t1;Parent=g9509.t1 #PROT g9509.t1 g9509 MQSEDYFEFCDHEGPSPSGSSGTESIDFDIGAMNALTDGHGAGVTPPSTYGYGGTASDSAGIHTHAPRTQTDEPKMMYRTGEGAADRPEVGREGQAQDGVAGHVGQSRPGGVVFDKDKDSFLRKLIR* # ORIGINAL: g9508.t1 original gene structure, not modified by PASA NODE_1317_length_12171_cov_41.4005 AUGUSTUS gene 5006 6436 . - . ID=g9508;Name=g9508.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS mRNA 5006 6436 . - . ID=g9508.t1;Parent=g9508;Name=g9508.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS exon 5006 6436 . - . ID=g9508.t1.exon1;Parent=g9508.t1 NODE_1317_length_12171_cov_41.4005 AUGUSTUS CDS 5006 6436 . - 0 ID=cds.g9508.t1;Parent=g9508.t1 #PROT g9508.t1 g9508 MTDGVDTLHSPTVSQTLHNQQQQQQKQQLQQHLQLSESWKDAGSPQHRYRDATQFNSLGNPGFAQLSSHFGDANVNRTDTLRVTADANADTAEHVGDVVDARHWQGVTSAVFFQGDVSDVSGERQAMAAGVDPRTFVHRASLHSGRPQQQQQQLQQQQQQQHEHRRHLQHLPPPPQKQPHGAGYPISALAPAQYGGMDGTGGLRSAHAAVGHVMPTGTPPVAVTIAHPGIQSSRTHIDHVRSVSDVQGHASGLQSGEFIASPQDAGGDAVQLMVGVGESASVHTGGQEDNNTGTGADYNKDELLSSVLLRQEYILSSIAGLTKEWQVRQKEKFGNSKGALQTCCYKGCIKLTNWDLSSNALATAIFLRHSPVRPSMQTLNVALTNVRDNILLLENESHHVARLITTLQSPDADLMSTAGNTSIPTGPGSHADMPGWAAVGQQLLPQQQLQQQLLQQQQPTQGQLTRQHLPQLQSMQ* # PASA_UPDATE: g6517.t1, single gene model update, valid-1, status:[pasa:asmbl_2254,status:12], valid-1 NODE_1656_length_9956_cov_42.9396 . gene 1936 3642 . + . ID=g6517;Name=g6517.t1 NODE_1656_length_9956_cov_42.9396 . mRNA 1936 3642 . + . ID=g6517.t1;Parent=g6517;Name=g6517.t1 NODE_1656_length_9956_cov_42.9396 . five_prime_UTR 1936 1990 . + . ID=g6517.t1.utr5p1;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . exon 1936 1990 . + . ID=g6517.t1.exon1;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . exon 2402 2502 . + . ID=g6517.t1.exon2;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . CDS 2402 2502 . + 0 ID=cds.g6517.t1;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . exon 2643 2784 . + . ID=g6517.t1.exon3;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . CDS 2643 2784 . + 1 ID=cds.g6517.t1;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . exon 3082 3642 . + . ID=g6517.t1.exon4;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . CDS 3082 3477 . + 0 ID=cds.g6517.t1;Parent=g6517.t1 NODE_1656_length_9956_cov_42.9396 . three_prime_UTR 3478 3642 . + . ID=g6517.t1.utr3p1;Parent=g6517.t1 #PROT g6517.t1 g6517 MVKHNNMVPNGHFHKQWERYVKTWFDQPGSKKSRRLTRIKKALAIAPRPTGGALRPAVRGQTNKYNTKIRAGRGFTLEELKEAGINRLVAPTIGICVDHRRTNKSVEGLQANVARLREYKSKLIVFPRRSNKPKAGDATKEQIATAAQLKGTPIPVVQTHPRLKARAITEEEQKHSAFRTLRIARADARLVGVREKRRKQKEEEEKLAKKKE* # PASA_UPDATE: g6516.t1, single gene model update, valid-1, status:[pasa:asmbl_2256,status:12], valid-1 NODE_1656_length_9956_cov_42.9396 . gene 172 1312 . - . ID=g6516;Name=g6516.t1 NODE_1656_length_9956_cov_42.9396 . mRNA 172 1312 . - . ID=g6516.t1;Parent=g6516;Name=g6516.t1 NODE_1656_length_9956_cov_42.9396 . five_prime_UTR 1119 1312 . - . ID=g6516.t1.utr5p1;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . exon 1088 1312 . - . ID=g6516.t1.exon1;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . CDS 1088 1118 . - 0 ID=cds.g6516.t1;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . exon 596 729 . - . ID=g6516.t1.exon2;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . CDS 596 729 . - 2 ID=cds.g6516.t1;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . exon 172 336 . - . ID=g6516.t1.exon3;Parent=g6516.t1 NODE_1656_length_9956_cov_42.9396 . CDS 172 336 . - 0 ID=cds.g6516.t1;Parent=g6516.t1 #PROT g6516.t1 g6516 MRRDKKDEDNGDVTVFTNLEKSAVLQEARQVFNENAINPRKCVHVLTKLLYIIDLGEPIGTREATETFFAITKLFQSKDVGVRMTAVSAVVQWWMVHCRVRNFHSIPRL* # PASA_UPDATE: g6518.t1, single gene model update, valid-1, status:[pasa:asmbl_2257,status:12], valid-1 NODE_1656_length_9956_cov_42.9396 . gene 4113 6282 . - . ID=g6518;Name=g6518.t1 NODE_1656_length_9956_cov_42.9396 . mRNA 4113 6282 . - . ID=g6518.t1;Parent=g6518;Name=g6518.t1 NODE_1656_length_9956_cov_42.9396 . exon 6162 6282 . - . ID=g6518.t1.exon1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . CDS 6162 6282 . - 0 ID=cds.g6518.t1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . exon 5681 5749 . - . ID=g6518.t1.exon2;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . CDS 5681 5749 . - 2 ID=cds.g6518.t1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . exon 5278 5321 . - . ID=g6518.t1.exon3;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . CDS 5278 5321 . - 2 ID=cds.g6518.t1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . exon 4722 4968 . - . ID=g6518.t1.exon4;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . CDS 4722 4968 . - 0 ID=cds.g6518.t1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . exon 4113 4537 . - . ID=g6518.t1.exon5;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . CDS 4392 4537 . - 2 ID=cds.g6518.t1;Parent=g6518.t1 NODE_1656_length_9956_cov_42.9396 . three_prime_UTR 4113 4391 . - . ID=g6518.t1.utr3p1;Parent=g6518.t1 #PROT g6518.t1 g6518 MLTVQQIKVSINGQNQLSALLTHALSLGASLARMACTAIACLPNRLHLLSLSPSVKPYLRDFFGTAKMAESVQVFGRKKTATAVAHCKKGTGLLKINGSPIELFEPRTLSFKVMEPILLLGKERFAGVDVRVRVNGGGHTAQVYAIRQAIAKAIVAFYQKYVDESSKKEIKDILLAYDRSLLVADPRRAEPKKFGGPGARARYQKSYR* # PASA_UPDATE: g6519.t1, single gene model update, valid-1, status:[pasa:asmbl_2255,status:3], valid-1 NODE_1656_length_9956_cov_42.9396 . gene 6138 8293 . + . ID=g6519;Name=g6519.t1 NODE_1656_length_9956_cov_42.9396 . mRNA 6138 8293 . + . ID=g6519.t1;Parent=g6519;Name=g6519.t1 NODE_1656_length_9956_cov_42.9396 . five_prime_UTR 6138 6336 . + . ID=g6519.t1.utr5p1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 6138 6336 . + . ID=g6519.t1.exon1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 6437 6511 . + . ID=g6519.t1.exon2;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . CDS 6437 6511 . + 0 ID=cds.g6519.t1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 6748 6881 . + . ID=g6519.t1.exon3;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . CDS 6748 6881 . + 0 ID=cds.g6519.t1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 7187 7316 . + . ID=g6519.t1.exon4;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . CDS 7187 7316 . + 1 ID=cds.g6519.t1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 7564 7635 . + . ID=g6519.t1.exon5;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . CDS 7564 7635 . + 0 ID=cds.g6519.t1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . exon 7891 8293 . + . ID=g6519.t1.exon6;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . CDS 7891 7902 . + 0 ID=cds.g6519.t1;Parent=g6519.t1 NODE_1656_length_9956_cov_42.9396 . three_prime_UTR 7903 8293 . + . ID=g6519.t1.utr3p1;Parent=g6519.t1 #PROT g6519.t1 g6519 MSDDESSRQDEHSDRGNDSTLMREQDRFLPIANVSKIMKNAIPDNGKIAKDAKECVQECVSEFISFITSEASDRCHQEKRKTINGEDILWAMQSLGFDNYIEPLKLYLQKYRESVKGDKGVVDKKKDDEIGGDLGYNNYG* # ORIGINAL: g13936.t1 original gene structure, not modified by PASA NODE_4192_length_2042_cov_35.4057 AUGUSTUS gene 1480 1946 . + . ID=g13936;Name=g13936.t1 NODE_4192_length_2042_cov_35.4057 AUGUSTUS mRNA 1480 1946 . + . ID=g13936.t1;Parent=g13936;Name=g13936.t1 NODE_4192_length_2042_cov_35.4057 AUGUSTUS exon 1480 1946 . + . ID=g13936.t1.exon1;Parent=g13936.t1 NODE_4192_length_2042_cov_35.4057 AUGUSTUS CDS 1480 1946 . + 0 ID=cds.g13936.t1;Parent=g13936.t1 #PROT g13936.t1 g13936 MPLAKQALVIESHADIEQGFVVSRGDVVWILGDVLGTIASSQSSAHDPAELLSDVLVKTSNGSLSSEGARGTIPNNKLRLVESEAADGIACVRPQDYFRDAPDNGPEPFVPRLAVKLNAVEAFAIPHPYEPELNGLAWEPDQLCRIPRVPDVIPL # ORIGINAL: g11414.t1 original gene structure, not modified by PASA NODE_4076_length_2229_cov_37.7665 AUGUSTUS gene 45 1971 . + . ID=g11414;Name=g11414.t1 NODE_4076_length_2229_cov_37.7665 AUGUSTUS mRNA 45 1971 . + . ID=g11414.t1;Parent=g11414;Name=g11414.t1 NODE_4076_length_2229_cov_37.7665 AUGUSTUS exon 45 1584 . + . ID=g11414.t1.exon1;Parent=g11414.t1 NODE_4076_length_2229_cov_37.7665 AUGUSTUS CDS 45 1584 . + 0 ID=cds.g11414.t1;Parent=g11414.t1 NODE_4076_length_2229_cov_37.7665 AUGUSTUS exon 1865 1971 . + . ID=g11414.t1.exon2;Parent=g11414.t1 NODE_4076_length_2229_cov_37.7665 AUGUSTUS CDS 1865 1971 . + 2 ID=cds.g11414.t1;Parent=g11414.t1 #PROT g11414.t1 g11414 LPGASSTPNDTYDAAQTSFIFRSFGTGIQSTSIPLDKVIVQQWLSDPTHNQGVILQSVPDPSTTSPRCWIYSSEMTEFNFRPLLSIRYIPAPFDPDSGNPDVPQKITLGANDKTSLKVTWEAPLFDGGNAITSYTVEYDLLPTFANIARKKTGQGIGSIVTAGAAREATIGGLATGVAVYVRVFASTSNTTGLARASSPDFSLPAQTPSIPLSASMTVQSASSLRIAFSPPADNGGASIIGYEVTWSTDASGFPIVGNMLLDDRSRQYDITNLTESVSYYVRVSAVNFVGRGPYALGAPTLAPTNRAPDAPRFVKLQVLSSDGLLVQWEPPVDNGGVAVDGYRVYYGLAAAADKDLLIAEQWDTTIPYVMLFGLTEGESYRAVVAAHNARGWGPTMQTSPINASPANITLARAYFQEGFGGYVGTTEVVISTINIASYNLFNGFTYGPYLSQSLRADDTAITSVSDAGGQISRPLIRFKNLETGVPAGSTVIEATLSLSFVYHGTDKQQFEIRGLYVNTTWNEKFVSNNYTGVGWRFRDYPDWRHPNA* # ORIGINAL: g8613.t1 original gene structure, not modified by PASA NODE_4600_length_1416_cov_35.0746 AUGUSTUS gene 86 1416 . + . ID=g8613;Name=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS mRNA 86 1416 . + . ID=g8613.t1;Parent=g8613;Name=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS exon 86 281 . + . ID=g8613.t1.exon1;Parent=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS CDS 86 281 . + 0 ID=cds.g8613.t1;Parent=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS exon 563 642 . + . ID=g8613.t1.exon2;Parent=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS CDS 563 642 . + 2 ID=cds.g8613.t1;Parent=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS exon 1175 1416 . + . ID=g8613.t1.exon3;Parent=g8613.t1 NODE_4600_length_1416_cov_35.0746 AUGUSTUS CDS 1175 1416 . + 0 ID=cds.g8613.t1;Parent=g8613.t1 #PROT g8613.t1 g8613 AGIVSMVYTQTEILQKEVYLIEKIDTPKRERMNHLKAVCFLRPTDKNVDLLVQELREPKYGSYYIHFSNVIRLSSLERIAEADEHEVVHEVQEFYGDFFAVDKSLVTLNLSPVVGDNPQQWAPDVLHRATEGVVSLLLALRKRPVIRFQKSSGMCEALADALVVGLRQECMG # ORIGINAL: g13029.t1 original gene structure, not modified by PASA NODE_1907_length_8631_cov_46.4892 AUGUSTUS gene 1 175 . - . ID=g13029;Name=g13029.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS mRNA 1 175 . - . ID=g13029.t1;Parent=g13029;Name=g13029.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS exon 1 175 . - . ID=g13029.t1.exon1;Parent=g13029.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS CDS 1 175 . - 0 ID=cds.g13029.t1;Parent=g13029.t1 #PROT g13029.t1 g13029 MAIYLRVFSFKLQRFALVLVLVLVLVLVLMLVLVLVLVLVLVLVLVLVLVLVLVLVLV # ORIGINAL: g13030.t1 original gene structure, not modified by PASA NODE_1907_length_8631_cov_46.4892 AUGUSTUS gene 1299 8402 . + . ID=g13030;Name=g13030.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS mRNA 1299 8402 . + . ID=g13030.t1;Parent=g13030;Name=g13030.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS exon 1299 8402 . + . ID=g13030.t1.exon1;Parent=g13030.t1 NODE_1907_length_8631_cov_46.4892 AUGUSTUS CDS 1299 8402 . + 0 ID=cds.g13030.t1;Parent=g13030.t1 #PROT g13030.t1 g13030 MTWYMRCVPRTCRRPLRYIVCLLVLTTLSPVEATTDTTSDSHIDKQSTNDRSQSALTTSIEAEAGAPSTLAFSSPSRLPPLVDSFNIESVRAYILSGSTQVQISLRRGWHLCNPLTATPIVIPSGVHVELIGDNGDTEADVVVDFRGFSIMSNASQSNDGVGDAHNSDSFGGAALFVLSSGASFRISGITFDAISQTLFRVESGSTLNVSRVAFVHQFEGTDVPEIRILSSAPTIQTTGHVTLRNVSFSNGPQLVTHLWGDDMDPSASCEIQARNSAVVLISGGWLVERPCLVSSQHASRVNIRFSLFSNCSLGCVYSEGLSAVVIADSVAHLMGDSPLISLSGGAVASLLDLSIDNARLSLSFGNGTHGNATGEGDGAGIPSGDSWLPSVLHTDCGAVRASGNASITMTRVQFQMGDCAVSVSRESSAVHMSDVGVTVSDVQSLFAVSGASSLAVAHSAIWALRATHVGVLSESSLVRVFNCSIRAHRLFSVIDDASLLIERVVADLFPALLHLDSSDHVLSVIGTTASASVHRCILRSVPLPRRPDILRQTFRAAYGAVLTVSDTELRDFAGTLFASEHALVLFRGVAASAWRLPPRSIVDLSDLFAAFLPDLERGGIFDISGYASLSVVDCRFKGVPMASVGGIGFAGDRSQASLHNVTVAVAGGQNVRGAGFHVESDASVSVRGGEYTDILGLLYYESALDQSVGGFASVIDSASFSAVHVHMNTLRSGLGGLAYASGNASIHLEDLSVSDVVAIKGGGLVYVTGTANATITSLRCTDVYALDGGALYASQESRVVVDNVHVRGILTLRGAMVTAIDDATVSVTHSSVRDVDCSDILVAPYYLPAMWADYLYPEYANVGAYSSLGRIPVGAAFFVGNRAVMDIRNATVESVLNPRSGAGVACSDNGQLSVDGLVVMHAKTSDQGGGLYVDNECRISIRNINCVNTLAVHGGCIAAVGRSVIDVQSLDARNTIASLSGGALYVDGNSSVHLTDCVGVGTHSDLGGFLHSAGSSTTTVRMCHTSNSSATGHGGAFAATDAARLLIADVIMTNGTCPDGGCVAVLSGALVSITRSRFMSCTALEGFGGAVSMSGASVLSVTASLFANCAAMRGGSVYGSEESRIAITQSIAVQSLAGSAGGFIALAGASAAVLAEIASSASAATYGGFSHTADSSHFTLSNSSLAHASSLAGGAFFVTGVSTLIADSVDILYPSSSGPGSLIVMSGHAHAQLDATSVRDALAGASGECIFVRGSATVSLRRFRGVNIGRHGPAVVDEDWFSALPSAVSEYADVNCDNCTTYQHEKGDFFSQITGYGTVYNFVDSVPRLEDYSEQLFGGIPIWFMFPCLANSLTVDTEAVFGASNVKFDTSIFRIRNHVVLGSASFVDMVSMVVTLTGYLWVFDSDITRTVVEVEGYAYFREVEFSHGAQVSLHGTGTLRCEKCVFGLNALGRGAISDPALEVGPLLLLRDLATATVVNAMQENPVHVAGNGGFAWLTDNAVLRVTNGTFSGFTVTGDGGFVWAAAPENVAADVSASLYMEGVSLHSCHAGKRGGVLFLGSFATATLLDCDITTASAEDSGGSFAALEQSGLVVERTTIFDCLASGVKGGGVLLALGQPSVRFQDVSVMGAVSHGSGGMAYVQPGCDDVSSPVIALERVSVVAASSVASGGALFMRGGTLRAVFCQFSDVHAGVSGGVLACFGDRPSDVVLASSTFQTARSGSRGGLLSVADGSRVTVTDCVGAIFESAIDGGMVALSGDGRINVVSSRFESSMVTSGGGGFFWATSGLIVIKDSVFSESSATLGGGFAELQSLTAMDIDSVDIRNCSCSILGGGGFLLGGLARLGAANFSLVNTQSSGPGGALLSVGLASISLADGLIADVHALKGSGGAIAAFGASVVYVTHVDIARSSAYTDGGVVAFEESAIGNLVGLNATGSVSRTGNGGCIFASDNAVIVSIGISLHNCRAPTGAGGAAHVGGASSALLLRPSVSAASAVRGGAYSVDGSARVILRNATVNDAVAESDGGCVYAMSRDVMLDGGTFVGCRAGTIPSSYGAGGFMHYGVAPNGTSLALQLTGRITVSRAHAVFAPVVYSLTPLTSTTTAALLPQPDYDSLFQDGNTTFTTSPKRLVIFFASAGEQAPISAHSSPIELLTGEVIPNFVVAMVDAYGRPAFSSPSKPLTIRIESVSGQVGCSPSGDLTRTFVLDSRVEYAGIRVSAASPVNCVLRFVSGSLLYSDNDALLESVSLKITVRPCPAGTHVDSDGASHVFICREDNVGSAVQGLSGISTSTIIAIVVTVPVVCLLALVAGSVWVRRARNRWNEKQMQDFARHVQESAPDILAYELSREAIDLGEALGEGAFGVVYKAQ # PASA_UPDATE: g5917.t1, single gene model update, valid-1, status:[pasa:asmbl_6218,status:12], valid-1 NODE_3560_length_3206_cov_45.824 . gene 542 2961 . - . ID=g5917;Name=g5917.t1 NODE_3560_length_3206_cov_45.824 . mRNA 542 2961 . - . ID=g5917.t1;Parent=g5917;Name=g5917.t1 NODE_3560_length_3206_cov_45.824 . five_prime_UTR 2950 2961 . - . ID=g5917.t1.utr5p1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 2767 2961 . - . ID=g5917.t1.exon1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 2767 2949 . - 0 ID=cds.g5917.t1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 2181 2384 . - . ID=g5917.t1.exon2;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 2181 2384 . - 0 ID=cds.g5917.t1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 1831 1915 . - . ID=g5917.t1.exon3;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 1831 1915 . - 0 ID=cds.g5917.t1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 1473 1597 . - . ID=g5917.t1.exon4;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 1473 1597 . - 2 ID=cds.g5917.t1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 926 1099 . - . ID=g5917.t1.exon5;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 926 1099 . - 0 ID=cds.g5917.t1;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . exon 542 676 . - . ID=g5917.t1.exon6;Parent=g5917.t1 NODE_3560_length_3206_cov_45.824 . CDS 542 676 . - 0 ID=cds.g5917.t1;Parent=g5917.t1;3_prime_partial=true #PROT g5917.t1 g5917 MLVLEPLEPSESLEWEIYLKHAESPRTHTLEALAKEYKMTKHQIGQIVRSREHERLTFTDPDTKDLFLQFMPVARNFHGPTFHCVTHPRDDTPVEEYAPYLRAAYDLADNVDGGGKPHIQPMTDESFLKVMKAGVDDETARGRKTQYEKNKLKKLEEEARRFGQMPDHHDVGYFKKRSAVAKGRPSLVVSDVSRGVEYQNRAVTIVKPTGERESADELQKAKMVLRNFPRYRGERSQFGGLLEPIPNVRAQVEQILKEQREAVMPPELEKKMLPGVSPLTPKRGIPRNTTKERLDEENNLKD # PASA_UPDATE: g7499.t1, single gene model update, valid-1, status:[pasa:asmbl_9067,status:12], valid-1 NODE_7252_length_455_cov_80.1395 . gene 1 403 . - . ID=g7499;Name=g7499.t1 NODE_7252_length_455_cov_80.1395 . mRNA 1 403 . - . ID=g7499.t1;Parent=g7499;Name=g7499.t1 NODE_7252_length_455_cov_80.1395 . five_prime_UTR 381 403 . - . ID=g7499.t1.utr5p1;Parent=g7499.t1 NODE_7252_length_455_cov_80.1395 . exon 1 403 . - . ID=g7499.t1.exon1;Parent=g7499.t1 NODE_7252_length_455_cov_80.1395 . CDS 1 380 . - 0 ID=cds.g7499.t1;Parent=g7499.t1;3_prime_partial=true #PROT g7499.t1 g7499 MADSLYGAVLALYLGLGWTAEPTKATQHLEAERQLNWTPFGLVVLGGANITADIQPGLELADEAIWMGGNMDWAAMWLYLGHDVDEALRVAEVSIENYRSRLNDFWNFAGLTEADGGHPFTTSHYG # ORIGINAL: g13423.t1 original gene structure, not modified by PASA NODE_3063_length_4423_cov_37.6102 AUGUSTUS gene 1871 4279 . + . ID=g13423;Name=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS mRNA 1871 4279 . + . ID=g13423.t1;Parent=g13423;Name=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS exon 1871 2623 . + . ID=g13423.t1.exon1;Parent=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS CDS 1871 2623 . + 0 ID=cds.g13423.t1;Parent=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS exon 3315 3553 . + . ID=g13423.t1.exon2;Parent=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS CDS 3315 3553 . + 0 ID=cds.g13423.t1;Parent=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS exon 3997 4279 . + . ID=g13423.t1.exon3;Parent=g13423.t1 NODE_3063_length_4423_cov_37.6102 AUGUSTUS CDS 3997 4279 . + 1 ID=cds.g13423.t1;Parent=g13423.t1 #PROT g13423.t1 g13423 MDDNATELFLRVPRSPDMEITDDLVAADDCWRDYAFHGEILSFFLIVKCPFREEDRRSGVAAASLSSLSSPSSVSVASASTISQWTAYDAWRALFGQLKTDLSVNAMTSGKGIIDYRASAASLEVLSLSDGNGGVWPFSITNSASLPSSLNTEQSSQTRQRTTNPVETASGHFVYVIHTPLSMLPACQQLQLTITAHTTSESHSTQQQQRAAGERAFGVQGQSPSPSELAESLAESLRSLYVTDKGSSVGRSFRRMVDARLRVVPPPRITFNTRLSGDSKYVLAEAENAGETAISLCDVQLYLSRDNGEASQLRDAFRITVEKEAFPMKLCPNERHSFVFAIEPTSASADLLPDGAASGFATILSVTWAGEPILSLGQRITCQHMLTPTHASSPGLAVSLSRLTDVASASLAAAFDHGAHGFGG* # ORIGINAL: g6442.t1 original gene structure, not modified by PASA NODE_533_length_21657_cov_40.9023 AUGUSTUS gene 76 351 . - . ID=g6442;Name=g6442.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS mRNA 76 351 . - . ID=g6442.t1;Parent=g6442;Name=g6442.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 76 351 . - . ID=g6442.t1.exon1;Parent=g6442.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 76 351 . - 0 ID=cds.g6442.t1;Parent=g6442.t1 #PROT g6442.t1 g6442 MAALLRVVSTLVLILALNSVGLSAAPDAKARCSSVPDEVAAGGTQRSRTLGRDLERLTWWFKRNGGIAHRSVAPQEVEDMGIGVIATKGPIK # ORIGINAL: g6444.t1 original gene structure, not modified by PASA NODE_533_length_21657_cov_40.9023 AUGUSTUS gene 6136 7718 . + . ID=g6444;Name=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS mRNA 6136 7718 . + . ID=g6444.t1;Parent=g6444;Name=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 6136 6300 . + . ID=g6444.t1.exon1;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 6136 6300 . + 0 ID=cds.g6444.t1;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 6597 6707 . + . ID=g6444.t1.exon2;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 6597 6707 . + 0 ID=cds.g6444.t1;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 7053 7326 . + . ID=g6444.t1.exon3;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 7053 7326 . + 0 ID=cds.g6444.t1;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 7561 7718 . + . ID=g6444.t1.exon4;Parent=g6444.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 7561 7718 . + 2 ID=cds.g6444.t1;Parent=g6444.t1 #PROT g6444.t1 g6444 MSDQDAGKGKKGETGKGGGNFEFDKVGGECDHPASAIALPAQINAIKTDDRDIAQIMIDEHRLFESQFDQFGVAAEKRDWELCLHVAREISKGIAVHSWLEEVYLYPTLARHVSSKMQDHGIREHKEMEQKLDKAQQLDPRAGTIEALQFVDLVKEVDGDMRHHMQDEEKNMFPELRKKVAVEELKALGHKAQIARGSAPTHPHPHMPHKGMLAGVAGRFLGAVDRVEDRINKEE* # ORIGINAL: g6445.t1 original gene structure, not modified by PASA NODE_533_length_21657_cov_40.9023 AUGUSTUS gene 8240 15849 . - . ID=g6445;Name=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS mRNA 8240 15849 . - . ID=g6445.t1;Parent=g6445;Name=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 15682 15849 . - . ID=g6445.t1.exon1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 15682 15849 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 15393 15518 . - . ID=g6445.t1.exon2;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 15393 15518 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 14245 14658 . - . ID=g6445.t1.exon3;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 14245 14658 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 13839 13960 . - . ID=g6445.t1.exon4;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 13839 13960 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 12770 13423 . - . ID=g6445.t1.exon5;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 12770 13423 . - 1 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 12514 12614 . - . ID=g6445.t1.exon6;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 12514 12614 . - 1 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 11998 12301 . - . ID=g6445.t1.exon7;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 11998 12301 . - 2 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 11650 11714 . - . ID=g6445.t1.exon8;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 11650 11714 . - 1 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 11156 11340 . - . ID=g6445.t1.exon9;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 11156 11340 . - 2 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 10806 10964 . - . ID=g6445.t1.exon10;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 10806 10964 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 10529 10645 . - . ID=g6445.t1.exon11;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 10529 10645 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 10035 10123 . - . ID=g6445.t1.exon12;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 10035 10123 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 9627 9723 . - . ID=g6445.t1.exon13;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 9627 9723 . - 1 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 9354 9452 . - . ID=g6445.t1.exon14;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 9354 9452 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 9006 9149 . - . ID=g6445.t1.exon15;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 9006 9149 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 8584 8754 . - . ID=g6445.t1.exon16;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 8584 8754 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 8240 8287 . - . ID=g6445.t1.exon17;Parent=g6445.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 8240 8287 . - 0 ID=cds.g6445.t1;Parent=g6445.t1 #PROT g6445.t1 g6445 MAQQRSSLEGELFDDTFDGQCFECVLLHTLLHDTSVLALVAASDYLFSASQDSFIKAWDMHTYLPKTMLKGHHNSILCLASSPDEKLLFSASRDATIRVLPFDASTFSPIHIESPIELPTLDSMPAHYDLPRQHHNGYVNCLAMYAPDPSVCYGNSSPWCREVDVVGNRKPQVLFSGSGDATIKAWRVAAPSGSGNDGDGLVPVATLTGHSGSVLALKVVVDRHLLFSGSQDATIKVWDLETFHCRRTLVGHDDDVLGLECIGDILYSSSADGTIRGWDTVQFLCIRMMTLRSDPHVSAAAHLLSRQSLSRQVSAPPADMPPPFTIPSILTVRPHECASCGLGGWDARHHEGHSDTHKHESAESHDVALGASRPQQQRQREDGDARPFVNHFSSPAPRTAHGHGHVTQGSRALTPSAPSGARVSTPTIQRRVRTLSGSTSTIVHVRDGDGDPVGDEPVIILCLASGGNGRLISGGSDFKICVWDTSRLVGDEGIKFRMESALRSEIGLPLTPSFQRRSVGRNDSVVSLADDDESADNANASTSHTDQQLFGVKSPKSLKLHPGERWVTPNDDFLAVLRKFVSIRTVSESPALREECWEGARFLRGAFNLIGARTRLVAGAPGRNPVVLARVGSEVKKRPVITIYGHYDVQPAITHGHPAGGWESDPFTLTGRQGYLYARGVTDDKGPIVATIFAVKELIDAGKLDVDVCFVYEGEEECDSAGFGEAVMNNLDWFEGTNLVLISNTHWLGEDIPCVTYGLRGVIHVEVSVTGASRDLHSGLDGGVLREPMTDLVQLLSSLSDEDGKVLLPRFYDKVRPLSEEEEKLYEGLEMEISRFSINGTSSHLPPNKDLLLRRWRYPTMTVHDIKVSGPRTSTVIPRSVTAALSFRLVEDQDMSDIIGSLNEHLTAQFATMKSPNELHVRVVHKSDWWLGDWTSKYFKAAERAIEKVWGVRPLMTREGGTIPNTTFLERVLCAPALHLPLGQSTDGAHLPNERIRLKNLVRGKDVLCALFEEIAAANK* # PASA_UPDATE: g6447.t1, single gene model update, valid-1, status:[pasa:asmbl_8010,status:12], valid-1 NODE_533_length_21657_cov_40.9023 . gene 19402 21560 . - . ID=g6447;Name=g6447.t1 NODE_533_length_21657_cov_40.9023 . mRNA 19402 21560 . - . ID=g6447.t1;Parent=g6447;Name=g6447.t1 NODE_533_length_21657_cov_40.9023 . five_prime_UTR 21560 21560 . - . ID=g6447.t1.utr5p1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . exon 21443 21560 . - . ID=g6447.t1.exon1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . CDS 21443 21559 . - 0 ID=cds.g6447.t1;Parent=g6447.t1;5_prime_partial=true NODE_533_length_21657_cov_40.9023 . exon 20983 21093 . - . ID=g6447.t1.exon2;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . CDS 20983 21093 . - 0 ID=cds.g6447.t1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . exon 20712 20783 . - . ID=g6447.t1.exon3;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . CDS 20712 20783 . - 0 ID=cds.g6447.t1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . exon 20325 20463 . - . ID=g6447.t1.exon4;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . CDS 20325 20463 . - 0 ID=cds.g6447.t1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . exon 19402 19914 . - . ID=g6447.t1.exon5;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . CDS 19808 19914 . - 2 ID=cds.g6447.t1;Parent=g6447.t1 NODE_533_length_21657_cov_40.9023 . three_prime_UTR 19402 19807 . - . ID=g6447.t1.utr3p1;Parent=g6447.t1 #PROT g6447.t1 g6447 VLAKVSGLLAARGFNIDSLVVSATDIPQLSRMTIVLRGQETKMQQARKQLEDLVHVYAVLDYTNTHLVERELLLVKVSTRNKGLPGDLIAEHLHRQAIVELTKLFDGRVVDIGSEHLIIELTSWSRRIDAFIKLMKPYGIIEATRSGVMVQPRSPVGALQHNKHEETKASPAVDETALPPG* # ORIGINAL: g6446.t1 original gene structure, not modified by PASA NODE_533_length_21657_cov_40.9023 AUGUSTUS gene 16521 19211 . + . ID=g6446;Name=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS mRNA 16521 19211 . + . ID=g6446.t1;Parent=g6446;Name=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 16521 16659 . + . ID=g6446.t1.exon1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 16521 16659 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 16897 16976 . + . ID=g6446.t1.exon2;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 16897 16976 . + 2 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 17150 17248 . + . ID=g6446.t1.exon3;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 17150 17248 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 17565 17876 . + . ID=g6446.t1.exon4;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 17565 17876 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 18128 18193 . + . ID=g6446.t1.exon5;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 18128 18193 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 18510 18665 . + . ID=g6446.t1.exon6;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 18510 18665 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 18855 18926 . + . ID=g6446.t1.exon7;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 18855 18926 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 19050 19211 . + . ID=g6446.t1.exon8;Parent=g6446.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 19050 19211 . + 0 ID=cds.g6446.t1;Parent=g6446.t1 #PROT g6446.t1 g6446 MVKMLTFDEAFNLFLMAILVFGCIVFVVNILSRLRDAHISRRKHYAVAAPTEDELARRRMRVVEQTQQIIAEKAAEVLALRKEKEQKELEEVARKNDVDMGRRLVPATHRGREEQAAKAASNGTGGIPRGDSESTEAKGAGSILRRRVNVHNSNASGSASGSSGVGVGGGSVNVPAVDGNSQERHSVAESAAPSGDDVPSLAAARTALAERLRVQEEIEKQQQINEKLAADEEKRRLREAAIASLADAIVPEPAADAPNLCRLKIRLPNGDILRRRFDADAPLQQLVDWLHVEGYDPAEFAIFTGTPKVRVGWESRDAFKGIGVRRSANNSSANAPSGGSPLSLRGAGLYPAATVYCERKA* # ORIGINAL: g6443.t1 original gene structure, not modified by PASA NODE_533_length_21657_cov_40.9023 AUGUSTUS gene 780 5097 . + . ID=g6443;Name=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS mRNA 780 5097 . + . ID=g6443.t1;Parent=g6443;Name=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 780 3980 . + . ID=g6443.t1.exon1;Parent=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 780 3980 . + 0 ID=cds.g6443.t1;Parent=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 4268 4342 . + . ID=g6443.t1.exon2;Parent=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 4268 4342 . + 0 ID=cds.g6443.t1;Parent=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS exon 4630 5097 . + . ID=g6443.t1.exon3;Parent=g6443.t1 NODE_533_length_21657_cov_40.9023 AUGUSTUS CDS 4630 5097 . + 0 ID=cds.g6443.t1;Parent=g6443.t1 #PROT g6443.t1 g6443 MDVRARGSISGHPGCVEAVCAARATRAISHNHHTAMFAVCINLAFTLLFLACYSVPCVSAATSHSIVDIINSTALAAKLSPKVSGRIATVNLTKISALEWPAGAPFVLDLGEKNTLVFDGSGMNIGCNPILNSPPRTLSVTSGTLVLRNFTMQKCLAVYDADLGYGVLVSLSTSKAVLNMTDVRFDTVTMLRVLDAHAGKAWLSRLSVIAMTIERASLTKQNPFLPTATDLFEAVMAVAVGTSVVRVHDCYVRDSGSYGQQDVRGGLFFVDESGRVEVERLNAINPSSQGGAVAYIRGDASMTMLASNITVTTLSNSLPSGSLFIVLADSVASGVTGANLVIGGSVFQGCAVDDTTLSNLPQFGAVANLGFSSTMVVTDTRFTEFIAMNGGVAWVADSSSLTMTRCEFYGVIATDGGVVHVVGEGAVTIEHSIAANVSANNDGGFAYVSSVHASLLLRNISVTRATAGNYDATVTQAAADLDGNGGALSVEAGKLTVEGCSFTECSAITGGLLRAFGEATVNLTSVTSRDCSAVLNGGCIFTSDVGTVVTVYGGSFLRCAAGTDTLNFGSGGFAHIERGASVEGVGRISLASPSAVVGPGVFYNSKVGTISSLCDTLFLDTPFAPSGIHDHVANWESGGLFTSLPLHLVASLGLADSADGSRVGGVGGVGYTAKGTAGSIPTVTATGSSGSGRGGGCRGAINGTDLNPSLGVTIGGALPEFHIRILDYYGNPVSMRAEKPLTILLSANDSSVVLRGNDERSFGLGARVGVPLLRVFATPGSYSFHATSANPFIFGPYDKNSDDASFLASFNISVRVSDCGEGYARAITEEGLPDCIGLPPVALLVGSGGSSKDTVAIAVPVTIVLGVVIVIAVFGIVRWRLALIRLEESRATHREFVEKHVNGLELLGQLELPRESVEILDRLGSGEFGEVYRARVLIEGRPRLCAAKTMKEGLSFDERVAFVSEAEVMVGLQHPNVVCLCGLVLHSEPTLILLEYLPYGNLLSFVEGIPPARREASCATTVEMLEAFAAQIASGMSYLEKMAVVHRDLAARNVMVGQDAFGEYVVKVADFGMSKDLGEKAYFRLTKSEKLPASDVWSFGVVIVEMFGFGDTLYPGITNASLLAHISAGNRLERPPACPIDLFQGVVSQCWREDPQLRPTFDTLVIHLTQRQRRRTHTAGDGMSKPNARGVAPQTSENSYDNMNGAESRDTAVAPDAYEMDSIREAEYLPMDADVNTSHTYLRISMA* # PASA_UPDATE: g4623.t1, single gene model update, valid-1, status:[pasa:asmbl_2911,status:12], valid-1 NODE_1886_length_8735_cov_41.5248 . gene 4555 8656 . - . ID=g4623;Name=g4623.t1 NODE_1886_length_8735_cov_41.5248 . mRNA 4555 8656 . - . ID=g4623.t1;Parent=g4623;Name=g4623.t1 NODE_1886_length_8735_cov_41.5248 . five_prime_UTR 8626 8656 . - . ID=g4623.t1.utr5p1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 8407 8656 . - . ID=g4623.t1.exon1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 8407 8625 . - 0 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 8079 8178 . - . ID=g4623.t1.exon2;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 8079 8178 . - 0 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 7681 7774 . - . ID=g4623.t1.exon3;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 7681 7774 . - 2 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 7305 7380 . - . ID=g4623.t1.exon4;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 7305 7380 . - 1 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 6352 7109 . - . ID=g4623.t1.exon5;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 6352 7109 . - 0 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 5655 6093 . - . ID=g4623.t1.exon6;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 5655 6093 . - 1 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . exon 4555 5268 . - . ID=g4623.t1.exon7;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . CDS 4654 5268 . - 0 ID=cds.g4623.t1;Parent=g4623.t1 NODE_1886_length_8735_cov_41.5248 . three_prime_UTR 4555 4653 . - . ID=g4623.t1.utr3p1;Parent=g4623.t1 #PROT g4623.t1 g4623 MVIPARQSKFAVKAWCPSGCTDTLGASRDANVTVFATMLHSHVAGRAIELRTIRNGSELGVLTNEPHYDFNYQSFHVHNPPAILHPGDEFQLTCTYDTTARSGPTRGGLGTQNEMCLAYIAYYPRATLDGCVFGYSDGVQSLVSPDTPGAIPVAFCIGNGSQTFAGDFRPFTQTPAPVPSCDHVPPPQDRTVPVLVDRREFSTDIYSGVAALDITEDAGVYSRDEIESAVTTNPNEVRIANLSASDFLLFWKEDASSGIVDVAVVAATDGWLAVGLSPNGGMPGSDVTMGWVDRVSGTLHVTDRHADGYFLPGVDALQDVFDVSGYTAMSQVEPGTGSSAYAWSTPSLTPVAVSSGPAEAASSAPVVPSAVPSPCIASDDGRYDYQYRLSEYITMRWKFVGDDAISVQLVHSDKGWVGIGISESGGMAPSDAVIGLLDGGGSVREYKITAMSGSGVNLDPVQTLTNASIRVDMTDGEPHTVVEFVRLLSHPGKREIVRGRTNRMIFACGEETFGMHEWFGTYRIDFDSCSVSGHGEEEEGSEGAKNAHGVLMFLAFGIAMPLGILSVIRLKPHPMDAPSDSVCLSYFVVRSKQPWFIIHALFQLFCLIFAIAGFALAFKIAGEREPVYNGVHGSLGVAVMSFLLFQPVNAALRPNPPAVGQTPSAVRRVWEMVHKNIGRLLFVLGSTNVFIGFRLLGLPTWCTVAFAMLFIAYVVAALMRLHATGRIPFISTGGGRSKTGGGAQRRMQSDEQYLALTKFDDNAMDD* # PASA_UPDATE: g4622.t1, single gene model update, valid-1, status:[pasa:asmbl_2910,status:12],[pasa:asmbl_2912,status:12],[pasa:asmbl_2913,status:12], valid-1 NODE_1886_length_8735_cov_41.5248 . gene 587 4537 . + . ID=g4622;Name=g4622.t1 NODE_1886_length_8735_cov_41.5248 . mRNA 587 4537 . + . ID=g4622.t1;Parent=g4622;Name=g4622.t1 NODE_1886_length_8735_cov_41.5248 . five_prime_UTR 587 610 . + . ID=g4622.t1.utr5p1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . exon 587 2657 . + . ID=g4622.t1.exon1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . CDS 611 2657 . + 0 ID=cds.g4622.t1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . exon 2926 3041 . + . ID=g4622.t1.exon2;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . CDS 2926 3041 . + 2 ID=cds.g4622.t1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . exon 3324 3641 . + . ID=g4622.t1.exon3;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . CDS 3324 3641 . + 0 ID=cds.g4622.t1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . exon 3893 4537 . + . ID=g4622.t1.exon4;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . CDS 3893 4330 . + 0 ID=cds.g4622.t1;Parent=g4622.t1 NODE_1886_length_8735_cov_41.5248 . three_prime_UTR 4331 4537 . + . ID=g4622.t1.utr3p1;Parent=g4622.t1 #PROT g4622.t1 g4622 MKTDKMDQPQDANSDAATAQNAFATLVSHLLQQSQPPATQTPYASTPTDTAMPVRSDAQGAEAQKDDEQIYAVVDEAGRPLFMSKDPAEARAFEQRMQFLQSSGTRDSQASGQVDAERTQDDSAAVPPNLAALLSGLVGGRPAQTAAPLQQQQQQHVPVVLIDERGRPIVVDPSAAAMYGSGGRSQRSQQQQQQDQPRLNVDAMDVDRTDRSGSRSSSNDEEEDFGALLRALGAAKAHRMQHPTGDSHENESRERDQHAVVYVDASGRPIAVRPPPQRRNLNMMTRLPSLGKTEPAHMGMGMAGAGGIHANSGGVNSAGVDGGARMRHTVPAEHDEQLQRLLAHAFGFSEQGGMKGQRQGQGAPAAARTTGQSSSSSIEGVPDHLPIFTLSERGEPVLIRPPSIEMQHRFAQQQQQQQQHQHQRQECDSPSFVMMDSAGRPVLVTSSLSRGGSADADMSDAAAEHYASVASAQGHARGAPMNQSQFGGQSSQRTSPFDGIPEDWDGTTPLVLTDTSGRTIVVPPQRRPSTSAHNTPVASAPSSRNPSGIMKSDSEFARIFANQAAGYADRAASAGSAASVTLPSGLQPLKTGVSGIEPGQMGVPVGYTINTDDDITFRREAQQLPRGALPGVGADREEIEADAFVRNQALGSLMLWKRPLVEIDANAHVDTALDRLETNNILAMPVYDSSKKQYIGLITVLDLMIYIAGRYFDDNGQIVSVAERKYRAQAPISSLIGTADYFSGRGKWRQNGLLVLEPTATIGDVLGPMAAGVQRVLVRVQATDMDEGDNDSVREGKEVQHRIISQGDIVKHLAEHNVFFARTFSSKLSKLGLATAQEGRSIVTVTPDVQALAAYRKLFEEDADALAVVDGEGRLVSTLSPSDLRGLRSKTAGDLLRPVGDYIMRKHYGRMPPAVAVRADASLLSAAVSALTANVHRVWVVDDKGVPVSMVRMQDMVKCVDGAMREGFGMEE* # PASA_UPDATE: g8118.t1, single gene model update, valid-1, status:[pasa:asmbl_6467,status:12], valid-1 NODE_3737_length_2865_cov_50.1867 . gene 890 2296 . - . ID=g8118;Name=g8118.t1 NODE_3737_length_2865_cov_50.1867 . mRNA 890 2296 . - . ID=g8118.t1;Parent=g8118;Name=g8118.t1 NODE_3737_length_2865_cov_50.1867 . exon 2092 2296 . - . ID=g8118.t1.exon1;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . CDS 2092 2296 . - 0 ID=cds.g8118.t1;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . exon 1906 1994 . - . ID=g8118.t1.exon2;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . CDS 1906 1994 . - 2 ID=cds.g8118.t1;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . exon 890 1759 . - . ID=g8118.t1.exon3;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . CDS 1592 1759 . - 0 ID=cds.g8118.t1;Parent=g8118.t1 NODE_3737_length_2865_cov_50.1867 . three_prime_UTR 890 1591 . - . ID=g8118.t1.utr3p1;Parent=g8118.t1 #PROT g8118.t1 g8118 MIAETSERRVVPAVVNEQSGAAESEESHLRTDWHSYYMPDGHCAARIQLGAPVFAVIRPPSPVTYASRVSTASKPVVPSEDAFWETDMELMSDFIQKKDQLRRDHQTYIEQHPELTALLSDFMSVLLQRTPDNVYEFAAEFFGPFSTSATTHT* # ORIGINAL: g6593.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 34191 36204 . - . ID=g6593;Name=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 34191 36204 . - . ID=g6593.t1;Parent=g6593;Name=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 36177 36204 . - . ID=g6593.t1.exon1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 36177 36204 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 35903 35950 . - . ID=g6593.t1.exon2;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 35903 35950 . - 2 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 35652 35821 . - . ID=g6593.t1.exon3;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 35652 35821 . - 2 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 35207 35467 . - . ID=g6593.t1.exon4;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 35207 35467 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 34779 35081 . - . ID=g6593.t1.exon5;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 34779 35081 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 34612 34689 . - . ID=g6593.t1.exon6;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 34612 34689 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 34358 34519 . - . ID=g6593.t1.exon7;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 34358 34519 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 34191 34265 . - . ID=g6593.t1.exon8;Parent=g6593.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 34191 34265 . - 0 ID=cds.g6593.t1;Parent=g6593.t1 #PROT g6593.t1 g6593 MAESSKQPEGTDEPKSKKNKYRRDKPWDHDGIDHWKIEAFTPEDNKGGTFAEESSFATLFPKYREKYLKEVWPTVTKTLGDKGVDCSLDLIEGSMTVKTTRKTWDPFVILKARDLIKLLARSVPVQQALKILQDDIACDIVKIGNVVRNKERFIKRRQRLLGPNGSTLKAIELLTGCYVLVQGNTVAAMGPHAGLKQVRNIVLDCMNNIHPIYNIKTLMIKRELAKDPELAKESWDRFLPTFKRKNVKTKKPKISKKEYTPFPPAQAPSKVDLQLESGEYFLKEEERQAKKVEEREARQATNVAKRKAQREESFMAPKEDAKKIQASSGAPSSTSADIARLKDKFKKEGSKRSLGESQGAADDGFLLKKKARTT* # ORIGINAL: g6583.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 6342 8274 . + . ID=g6583;Name=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 6342 8274 . + . ID=g6583.t1;Parent=g6583;Name=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 6342 6398 . + . ID=g6583.t1.exon1;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 6342 6398 . + 0 ID=cds.g6583.t1;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 6626 6669 . + . ID=g6583.t1.exon2;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 6626 6669 . + 0 ID=cds.g6583.t1;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 6803 6848 . + . ID=g6583.t1.exon3;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 6803 6848 . + 1 ID=cds.g6583.t1;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 7054 8274 . + . ID=g6583.t1.exon4;Parent=g6583.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 7054 8274 . + 0 ID=cds.g6583.t1;Parent=g6583.t1 #PROT g6583.t1 g6583 MSFWGGRKPDSDRVLIAPQGSQDVSRAFDGYKKWLADQQLMSKTYAVGQNGSQPNLQKRDAPDGAVVKATPGPDTQMHTDIPAPTSAQTLLSNSLSVSAPASSFASQLAEARRANASAPTPTATASSPSTSTTPSNAARATTAAASPSSGPTHPSTLRAERTNSSPSLASSVIAVGSSSLEPTLPVMWEGERAEEIISMIEEEQQQLIDALSRQRAVNGDLKRLLLASVGETVAERCESLVRERADLASHGRFLAERLRETEDLVEQERIRMDVWQAKTEALHITAGESAAARREASSIIRGLVEERSAIRSSLVHAHTALVRASTRIAEAVSPSRNLVSLAGHVRSLAEKMAPSVASPAHLETVPAPADGDGVASALEAAARAFVEREAAAVPSLECEVAGISVERTRRGERRARDGQSLLLSAAGRAHARGEQGGRSGIVNCCPRCRGFVLNV* # PASA_UPDATE: g6584.t1, single gene model update, valid-1, status:[pasa:asmbl_369,status:3], valid-1 NODE_109_length_39188_cov_41.2888 . gene 9637 11353 . + . ID=g6584;Name=g6584.t1 NODE_109_length_39188_cov_41.2888 . mRNA 9637 11353 . + . ID=g6584.t1;Parent=g6584;Name=g6584.t1 NODE_109_length_39188_cov_41.2888 . five_prime_UTR 9637 9722 . + . ID=g6584.t1.utr5p1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 9637 9843 . + . ID=g6584.t1.exon1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 9723 9843 . + 0 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 10081 10110 . + . ID=g6584.t1.exon2;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 10081 10110 . + 2 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 10238 10392 . + . ID=g6584.t1.exon3;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 10238 10392 . + 2 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 10541 10672 . + . ID=g6584.t1.exon4;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 10541 10672 . + 0 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 10953 11000 . + . ID=g6584.t1.exon5;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 10953 11000 . + 0 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . exon 11143 11353 . + . ID=g6584.t1.exon6;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . CDS 11143 11199 . + 0 ID=cds.g6584.t1;Parent=g6584.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 11200 11353 . + . ID=g6584.t1.utr3p1;Parent=g6584.t1 #PROT g6584.t1 g6584 MWPRAVSGVAVLAICVVLCASGVRADVDEIIDGYTDKAHALCVKLSRANIALDMESCEALQFVAMGFLERKARPVLKKSPLWTGDEDDADLKARRAPYDKDLEVAFRAMIKWMFGEERNLWDKNPTQMTREISEAFFTHFAKWLVKIMREEKLGEVTPALVEDWKHVQFSGNAGNARGEL* # PASA_UPDATE: g6585.t1, single gene model update, valid-1, status:[pasa:asmbl_366,status:3], valid-1 NODE_109_length_39188_cov_41.2888 . gene 11400 13005 . - . ID=g6585;Name=g6585.t1 NODE_109_length_39188_cov_41.2888 . mRNA 11400 13005 . - . ID=g6585.t1;Parent=g6585;Name=g6585.t1 NODE_109_length_39188_cov_41.2888 . five_prime_UTR 12933 13005 . - . ID=g6585.t1.utr5p1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 12878 13005 . - . ID=g6585.t1.exon1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 12878 12932 . - 0 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 12653 12735 . - . ID=g6585.t1.exon2;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 12653 12735 . - 2 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 12522 12571 . - . ID=g6585.t1.exon3;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 12522 12571 . - 0 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 12321 12395 . - . ID=g6585.t1.exon4;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 12321 12395 . - 1 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 11904 12072 . - . ID=g6585.t1.exon5;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 11904 12072 . - 1 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . exon 11400 11668 . - . ID=g6585.t1.exon6;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . CDS 11534 11668 . - 0 ID=cds.g6585.t1;Parent=g6585.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 11400 11533 . - . ID=g6585.t1.utr3p1;Parent=g6585.t1 #PROT g6585.t1 g6585 MGNGMNKILPGLYMGNIQDSQDRNELKKHNITHILSVHEQPAPVYDHITYLCIDAADAPSQDLRPHFRPAVDFIHKARIDGGNVLVHCMAGISRSSTLTLAYMMTSTELDFPTALVALRAARSVVCPNSGFRQQLEHYQETLLKAERQRLRELHAETEAISARDMKEAVLLVKNSADGDDKRRGPPYL* # ORIGINAL: g6591.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 27869 30306 . - . ID=g6591;Name=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 27869 30306 . - . ID=g6591.t1;Parent=g6591;Name=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 30178 30306 . - . ID=g6591.t1.exon1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 30178 30306 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 29796 29918 . - . ID=g6591.t1.exon2;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 29796 29918 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 29308 29388 . - . ID=g6591.t1.exon3;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 29308 29388 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 28992 29099 . - . ID=g6591.t1.exon4;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 28992 29099 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 28696 28741 . - . ID=g6591.t1.exon5;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 28696 28741 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 28234 28355 . - . ID=g6591.t1.exon6;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 28234 28355 . - 2 ID=cds.g6591.t1;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 27869 28024 . - . ID=g6591.t1.exon7;Parent=g6591.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 27869 28024 . - 0 ID=cds.g6591.t1;Parent=g6591.t1 #PROT g6591.t1 g6591 MMRETDVSAPSSQAPVLLRRETKASQKMALKEKFVQVFEGFFRGDNPSLENANFWNELLLLKVNGAFLEQSIAQLGEDHLLAIKDNVNLIVSKCSASLGDDNHIRVANALQILCIMLRAIFRKNFNNFGFDVINLIAKFDEAEGHFQLLVSSVQAIFIGNFPASTKSLALRLLTIIATATENVNQNTLVEFLMMNSVFESTLKIFVNPALREQLAGDALILLTVLATYRKHEAPNAYAAAIGEIEDEVVLKASG* # PASA_UPDATE: g6592.t1, single gene model update, valid-1, status:[pasa:asmbl_371,status:3], valid-1 NODE_109_length_39188_cov_41.2888 . gene 31618 32827 . + . ID=g6592;Name=g6592.t1 NODE_109_length_39188_cov_41.2888 . mRNA 31618 32827 . + . ID=g6592.t1;Parent=g6592;Name=g6592.t1 NODE_109_length_39188_cov_41.2888 . five_prime_UTR 31618 31706 . + . ID=g6592.t1.utr5p1;Parent=g6592.t1 NODE_109_length_39188_cov_41.2888 . exon 31618 32585 . + . ID=g6592.t1.exon1;Parent=g6592.t1 NODE_109_length_39188_cov_41.2888 . CDS 31707 32585 . + 0 ID=cds.g6592.t1;Parent=g6592.t1 NODE_109_length_39188_cov_41.2888 . exon 32690 32827 . + . ID=g6592.t1.exon2;Parent=g6592.t1 NODE_109_length_39188_cov_41.2888 . CDS 32690 32788 . + 0 ID=cds.g6592.t1;Parent=g6592.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 32789 32827 . + . ID=g6592.t1.utr3p1;Parent=g6592.t1 #PROT g6592.t1 g6592 MAALRIFVLAVVVAGAFAAPVMDFTDFAVWKNTHSKTYASAAEEAHRQKVYHANLVTINEHNAQGHSFTLAMNHFGDLEFHEFKAMFLGLDASLKQTGSSFIPAQNVALPDEVDWRTKGAVTEVKNQGQCGSCYAFSTTGSLEGQTAIKTGKLVSLSEQQIVDCSASAGNTGCGGGLMDQAFEYIKANGGLDTEASYAYTATNGTCRAKDGVVGAKVSGHVDIASGNETDLLNALATVGPISIAIDASQPTFQFYSTGVYDEAACSSTNLDHGVLAVGYGTLNGAPYYIVKNSWGPTWGQAGYIFMSRNKNNQCGVATVASYPLI* # ORIGINAL: g6586.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 13768 14571 . + . ID=g6586;Name=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 13768 14571 . + . ID=g6586.t1;Parent=g6586;Name=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 13768 13966 . + . ID=g6586.t1.exon1;Parent=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 13768 13966 . + 0 ID=cds.g6586.t1;Parent=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 14079 14254 . + . ID=g6586.t1.exon2;Parent=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 14079 14254 . + 2 ID=cds.g6586.t1;Parent=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 14518 14571 . + . ID=g6586.t1.exon3;Parent=g6586.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 14518 14571 . + 0 ID=cds.g6586.t1;Parent=g6586.t1 #PROT g6586.t1 g6586 MRLDTDHKGYVDAADFQRSLAFALSPVFPAIAKLMARGDARGAVSFDEFAVVVGASLANKQAAAARLVLRLLDGDDDGKATLEDVEVLLVTILGHTHSHATITAIAKSFMGRYGKDTLDINDVALLLASGDGEGKFSVHMRS* # ORIGINAL: g6595.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 38214 38998 . - . ID=g6595;Name=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 38214 38998 . - . ID=g6595.t1;Parent=g6595;Name=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 38894 38998 . - . ID=g6595.t1.exon1;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 38894 38998 . - 0 ID=cds.g6595.t1;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 38739 38769 . - . ID=g6595.t1.exon2;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 38739 38769 . - 0 ID=cds.g6595.t1;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 38479 38585 . - . ID=g6595.t1.exon3;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 38479 38585 . - 2 ID=cds.g6595.t1;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 38214 38255 . - . ID=g6595.t1.exon4;Parent=g6595.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 38214 38255 . - 0 ID=cds.g6595.t1;Parent=g6595.t1 #PROT g6595.t1 g6595 MSREEAPANRGADRMERRDVSHNDVPSEAEVERPRSARRRPSSANGRRSDPVARYHQYAAQWSRQRTPEEQSRNRLRWEVRESMLRPPQVVRDW* # ORIGINAL: g6588.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 19211 20659 . - . ID=g6588;Name=g6588.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 19211 20659 . - . ID=g6588.t1;Parent=g6588;Name=g6588.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 19211 20659 . - . ID=g6588.t1.exon1;Parent=g6588.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 19211 20659 . - 0 ID=cds.g6588.t1;Parent=g6588.t1 #PROT g6588.t1 g6588 MGASCLRVTALALSSAPINWIARATRPLFVARCAVTKAQQDSGAKTAAASCHSHHDLTIERLSDEGHGVAMLAGEPVVIPCVLPGERVVGRVYRTREGARAELVSPLPSAVSPVRVAAKCALFGTCNGCQLQHMAAPAQAAWKTSVVSAAFRAACPTAPPKVLPTIVSPVQYGYRSKITPHFERVGKSNAWKTSGTKQSTGADLGGAVGDAAEATLPCGFMHTHRHRIIDVPECPIASPHINALLPAARAAALADTKSFPRGGTLLLRDTVREDGTRTAASGARTYVEKVGELTFHFEAHSFFQNNPHALPALVDYVVAEACKVDENDDGPRYLVDAYCGTGLFAIAASRSFESVVGVEISRNQVASAAQNASRNGVTNCRFVAGTASVIFGHVTTPADRTTVIIDPPRGGCDESFIQQLIEYGPRRVVYVSCNPHTQARDCAALSAHYDVDVIQPFDLFPHTRHIESVATLVRRRDGHMVR* # ORIGINAL: g6589.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 21138 24531 . + . ID=g6589;Name=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 21138 24531 . + . ID=g6589.t1;Parent=g6589;Name=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 21138 21541 . + . ID=g6589.t1.exon1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 21138 21541 . + 0 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 21715 21755 . + . ID=g6589.t1.exon2;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 21715 21755 . + 1 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 21874 22022 . + . ID=g6589.t1.exon3;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 21874 22022 . + 2 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 22541 22662 . + . ID=g6589.t1.exon4;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 22541 22662 . + 0 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 22837 22990 . + . ID=g6589.t1.exon5;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 22837 22990 . + 1 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 23212 23770 . + . ID=g6589.t1.exon6;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 23212 23770 . + 0 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 24042 24290 . + . ID=g6589.t1.exon7;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 24042 24290 . + 2 ID=cds.g6589.t1;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 24389 24531 . + . ID=g6589.t1.exon8;Parent=g6589.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 24389 24531 . + 2 ID=cds.g6589.t1;Parent=g6589.t1 #PROT g6589.t1 g6589 MADAVDAESGQPIEAHISVDAHADAQIDSHAQEFVPAAANYDEPDTETFRAEAVALAPSAEDEAPADNKGDDAIDNGVEQGAGDTTDDGWVVRGVDNEAHGAASTAATATGQSDVDRQRDSSAAGVMGDTVHDDGKMFIGGLNWETTQEGLSRYFSTYGTVVEAVIMKDPHTGRSRYAHILVVFSFLVFWGGKVVMRNIEPKRAVPRTPAPTASGSGERTKKIFVGGISQQTTEDGLKSYFGRFGEVSEAVLMLDRDTRRPRGFGFVTFVSDDAADRVCETSFHEVDGKSVEVKKAQPLGVAPRPAARYGAGGHRDQDPRDSRDSHRDGYGGHGRDYGRDAYGRGGPYSRDSRDSRDSRNDYRDYRDRDSRGPGFRDQRNDGGYGAGGYGAGGYGGAYGGAAGGAGYGAPAPVYGAPASAYGGSAYSAPPAAAPYQGGAYGAPAAYGGGGYPAYGGARQQPAPAAGRSGGAYDPTEDAGRYGAYSASYNPAAAAAAASTYGYYGAGAGAYGAAAAQPAAAAAAYGAGYGDYGRAAGQVSATGAYGAPDATQAPANPYYAATVAPAVAAPAGGYGSAYGAPAARGGYEPEAAGARSGTAYHPYSYGR* # PASA_UPDATE: g6581.t1, single gene model update, valid-1, status:[pasa:asmbl_368,status:12], valid-1 NODE_109_length_39188_cov_41.2888 . gene 323 2011 . + . ID=g6581;Name=g6581.t1 NODE_109_length_39188_cov_41.2888 . mRNA 323 2011 . + . ID=g6581.t1;Parent=g6581;Name=g6581.t1 NODE_109_length_39188_cov_41.2888 . five_prime_UTR 323 323 . + . ID=g6581.t1.utr5p1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . exon 323 474 . + . ID=g6581.t1.exon1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . CDS 324 474 . + 0 ID=cds.g6581.t1;Parent=g6581.t1;5_prime_partial=true NODE_109_length_39188_cov_41.2888 . exon 687 728 . + . ID=g6581.t1.exon2;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . CDS 687 728 . + 2 ID=cds.g6581.t1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . exon 1123 1191 . + . ID=g6581.t1.exon3;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . CDS 1123 1191 . + 2 ID=cds.g6581.t1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . exon 1543 1598 . + . ID=g6581.t1.exon4;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . CDS 1543 1598 . + 2 ID=cds.g6581.t1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . exon 1797 2011 . + . ID=g6581.t1.exon5;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . CDS 1797 1913 . + 0 ID=cds.g6581.t1;Parent=g6581.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 1914 2011 . + . ID=g6581.t1.utr3p1;Parent=g6581.t1 #PROT g6581.t1 g6581 NLIWWNEADGKGFAVDYPSISMHAVCKDVSVFPSPCIYCQLEEGNTSDDSDVSELRLVPDDDGALMAIYEAMSDCQALHPSLDEDNEGDDDMIVNDDEVRVGAANEMRLRQLESVFSAPPEDHNGHEAVDGDDDQYEDADEMEH* # ORIGINAL: g6582.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 2259 4486 . - . ID=g6582;Name=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 2259 4486 . - . ID=g6582.t1;Parent=g6582;Name=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 4254 4486 . - . ID=g6582.t1.exon1;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 4254 4486 . - 0 ID=cds.g6582.t1;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 3764 4096 . - . ID=g6582.t1.exon2;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 3764 4096 . - 1 ID=cds.g6582.t1;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 3121 3592 . - . ID=g6582.t1.exon3;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 3121 3592 . - 1 ID=cds.g6582.t1;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 2773 2869 . - . ID=g6582.t1.exon4;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 2773 2869 . - 0 ID=cds.g6582.t1;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 2259 2584 . - . ID=g6582.t1.exon5;Parent=g6582.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 2259 2584 . - 2 ID=cds.g6582.t1;Parent=g6582.t1 #PROT g6582.t1 g6582 MITASFRRLCSLPRAVLSTVSSIVLPVVIIFVALCASMVMLVANCIQGRFPFSFNTFKVLAFQFFESLRSGYHPDVKRTAPEIIRSKAFPVEEHKCATRDGHVLELHRIPHGRVGKVHARGRGHTHVTHVAGDAHHHAYTHTHTHAQDPLGLGSDRRVVLVQHGLWQSSAVYLMNDAHECFPYVLADAGHDVWVGNNRGTSYSKFKAGPSAHWDWSLADMGEHDCEAMVEYILRATGEKSLVYIGHSQGSGQMFAALCTSPTLNSKISLFVAMSPAVFVSDADRGILKGLSFLAAHHPEAFVSSFGSGELMPIVQPLRALARSAGTAVWAIMGLLMFHILLGWNDRDLNPHRLAVLFSHTPDRTSTSTLLHLLQLMRSRKFRPMDRGLTTNRRRHGTDEPPEYDLKRVTCPVAVLYGARDGIIDVPRLLERIDPVLVQVQPEYNHMEYLWGVNAHKEVYPTILQLISKYGSTATAGASPSPVLVAA* # PASA_UPDATE: g6590.t1, single gene model update, valid-1, status:[pasa:asmbl_367,status:12], valid-1 NODE_109_length_39188_cov_41.2888 . gene 24688 27684 . - . ID=g6590;Name=g6590.t1 NODE_109_length_39188_cov_41.2888 . mRNA 24688 27684 . - . ID=g6590.t1;Parent=g6590;Name=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 27656 27684 . - . ID=g6590.t1.exon1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 27656 27684 . - 0 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 27469 27538 . - . ID=g6590.t1.exon2;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 27469 27538 . - 1 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 27244 27296 . - . ID=g6590.t1.exon3;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 27244 27296 . - 0 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 26897 27054 . - . ID=g6590.t1.exon4;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 26897 27054 . - 1 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 26459 26679 . - . ID=g6590.t1.exon5;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 26459 26679 . - 2 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 25884 26192 . - . ID=g6590.t1.exon6;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 25884 26192 . - 0 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 25629 25755 . - . ID=g6590.t1.exon7;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 25629 25755 . - 0 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 25316 25470 . - . ID=g6590.t1.exon8;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 25316 25470 . - 2 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . exon 24688 25129 . - . ID=g6590.t1.exon9;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . CDS 24953 25129 . - 0 ID=cds.g6590.t1;Parent=g6590.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 24688 24952 . - . ID=g6590.t1.utr3p1;Parent=g6590.t1 #PROT g6590.t1 g6590 MSRMYEEGIRTYASGIGGEVRSSTGLFHSLSSLMGSMFTSGDDKDDPLSRCKPPPNVAAMLLALYEAVTLNRNFVTVLTYIEPAKTELHPRVLAPGAKPGGSDGPVAGAAVTEADKQPTNLLSKFLTLCSYLFHCVRDDPSANHARLCLVVITCIVEDNFANAFLHDPNMTVPILLYQPSRGKRGANRASSPCEQPLAAALLDLMGGFVTANLKRNLRIDLYVRCIGAIHRMLCYEKRFRVRLAYTWKELWSALVGLVRFVLANEVALGESRNVYALCGQVVNIFNLFITFGDTFLPDPASYDELYYEVIRVSGVFRMLNEAAKKHVTSDGQWKDAARRLSANLTNLLAIIGHFTPKIDAWSAENQVASITPEQVLAVIRNNYDTLTLKLQEGLDQYERHAEQSAEGQFFRLMTRAVVAELRALPALPATSS* # ORIGINAL: g6594.t1 original gene structure, not modified by PASA NODE_109_length_39188_cov_41.2888 AUGUSTUS gene 36573 37959 . + . ID=g6594;Name=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS mRNA 36573 37959 . + . ID=g6594.t1;Parent=g6594;Name=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 36573 36701 . + . ID=g6594.t1.exon1;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 36573 36701 . + 0 ID=cds.g6594.t1;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 36907 37067 . + . ID=g6594.t1.exon2;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 36907 37067 . + 0 ID=cds.g6594.t1;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 37260 37416 . + . ID=g6594.t1.exon3;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 37260 37416 . + 1 ID=cds.g6594.t1;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS exon 37630 37959 . + . ID=g6594.t1.exon4;Parent=g6594.t1 NODE_109_length_39188_cov_41.2888 AUGUSTUS CDS 37630 37959 . + 0 ID=cds.g6594.t1;Parent=g6594.t1 #PROT g6594.t1 g6594 MAGAHRGPVTVGLTLDAIARAARIGLNSLRALPGSRRVVRASCAQRLGRGPSSGRGKNSGRGCKGQGKWGNAPKPGFEGGQTPFYRRVPKHGFRNITHRVEYDTVNLGKIQQWVDDGRLAAEELITMRTLQRAGLVSKNIKHGVKLLGDGSLFFKTPLNIVVSRASQSAIDAIERAGGRITCQYYGRVGLRALLKPEKFAILPKLPVPAKHKLRVFYSDPKNRGNLERVGPNKFVIRQTDLAPAAPPPPPPSSSSSSA* # PASA_UPDATE: g6587.t1, single gene model update, valid-1, status:[pasa:asmbl_370,status:3], valid-1 NODE_109_length_39188_cov_41.2888 . gene 15179 19194 . + . ID=g6587;Name=g6587.t1 NODE_109_length_39188_cov_41.2888 . mRNA 15179 19194 . + . ID=g6587.t1;Parent=g6587;Name=g6587.t1 NODE_109_length_39188_cov_41.2888 . five_prime_UTR 15179 15263 . + . ID=g6587.t1.utr5p1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 15179 15390 . + . ID=g6587.t1.exon1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 15264 15390 . + 0 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 15740 15862 . + . ID=g6587.t1.exon2;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 15740 15862 . + 2 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 16014 16357 . + . ID=g6587.t1.exon3;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 16014 16357 . + 2 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 16517 16739 . + . ID=g6587.t1.exon4;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 16517 16739 . + 0 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 17143 17224 . + . ID=g6587.t1.exon5;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 17143 17224 . + 2 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 17395 17545 . + . ID=g6587.t1.exon6;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 17395 17545 . + 1 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 17827 17912 . + . ID=g6587.t1.exon7;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 17827 17912 . + 0 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 18029 18158 . + . ID=g6587.t1.exon8;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 18029 18158 . + 1 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 18330 18405 . + . ID=g6587.t1.exon9;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 18330 18405 . + 0 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 18573 18763 . + . ID=g6587.t1.exon10;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 18573 18763 . + 2 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . exon 18946 19194 . + . ID=g6587.t1.exon11;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . CDS 18946 19032 . + 0 ID=cds.g6587.t1;Parent=g6587.t1 NODE_109_length_39188_cov_41.2888 . three_prime_UTR 19033 19194 . + . ID=g6587.t1.utr3p1;Parent=g6587.t1 #PROT g6587.t1 g6587 MVSASISFVGAFAPGNAPAYHRNRVFVVVGSKKQALAWLDSAAPATLIGNARLEIDLAKELVSAATVSEFSGQLVTHVVREYDGETPRGLVRVSFILVPTTCSRYNCPSRPDVLDEHLPRVFKAEAAEANPANASAESSTTRVSVCIILPEGADVTFARLSLSYAAAIGRACPLYSRKSGRDNKGSLEVQAAFACSKNVGELINGFADARLLSAVAEGVRRTAELVDAPCNEVNTDAMVDAARRVVERLHAAGAASVSIEVIAGEELQVRGFGGIYGVGKAAAHPPALVILKHTPSGASKSVTWVGKGIVYDTGGLSMKDRTNMVGMKRDMGGAAAILHAFEAAVSLGFKENLSALLCLAENSVGRLATRPDDIHTLYSGKTVEINNTDAEGRLVLADGVSYAARHLAPDCILDMCTLTGAQGISTGRRHGAIVCNDETLEHLSVVAGRRSGDMVHPLLYCPELFTTEFSSTFADMKNSVKNRDNAQASCAAQFIANNLGDYSKLWLHVDMASPVHRGERATGYGVALLVQLFHLDGIF* # ORIGINAL: g10693.t1 original gene structure, not modified by PASA NODE_4830_length_1218_cov_35.0866 AUGUSTUS gene 206 1047 . + . ID=g10693;Name=g10693.t1 NODE_4830_length_1218_cov_35.0866 AUGUSTUS mRNA 206 1047 . + . ID=g10693.t1;Parent=g10693;Name=g10693.t1 NODE_4830_length_1218_cov_35.0866 AUGUSTUS exon 206 446 . + . ID=g10693.t1.exon1;Parent=g10693.t1 NODE_4830_length_1218_cov_35.0866 AUGUSTUS CDS 206 446 . + 1 ID=cds.g10693.t1;Parent=g10693.t1 NODE_4830_length_1218_cov_35.0866 AUGUSTUS exon 676 1047 . + . ID=g10693.t1.exon2;Parent=g10693.t1 NODE_4830_length_1218_cov_35.0866 AUGUSTUS CDS 676 1047 . + 0 ID=cds.g10693.t1;Parent=g10693.t1 #PROT g10693.t1 g10693 DNGIIRTLDIPIYITKVKDSSVYCLDRDCKTRVLGIDPTEFRFKLALIRRKYDEVLYMVRNSKLIGQSIIAYLQKKGYPEVALHFVKDDRTRFGLALECGNIEVALEAAKALEDRDCWNSLGDAALRQGNHQVVEMAYQRTKNFERLSFLYLVTGNMDKLQKMLKIAELRGDASGQFHNALFLGDVSARVRLLQQGGLGGCRQ* # ORIGINAL: g12644.t1 original gene structure, not modified by PASA NODE_1004_length_14851_cov_46.437 AUGUSTUS gene 12871 14528 . + . ID=g12644;Name=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS mRNA 12871 14528 . + . ID=g12644.t1;Parent=g12644;Name=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 12871 12924 . + . ID=g12644.t1.exon1;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 12871 12924 . + 0 ID=cds.g12644.t1;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 13194 13277 . + . ID=g12644.t1.exon2;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 13194 13277 . + 0 ID=cds.g12644.t1;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 13607 13714 . + . ID=g12644.t1.exon3;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 13607 13714 . + 0 ID=cds.g12644.t1;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 14022 14161 . + . ID=g12644.t1.exon4;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 14022 14161 . + 0 ID=cds.g12644.t1;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 14366 14528 . + . ID=g12644.t1.exon5;Parent=g12644.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 14366 14528 . + 1 ID=cds.g12644.t1;Parent=g12644.t1 #PROT g12644.t1 g12644 MFVRDGKTECECPSPLVLSNGKCLDATDVQTPNLPSASSYAKVLFRDFAPVDGSTLTSLPTEITIDSALFRELLPAANSLCKSQGNLTACQVLGNLCVLQTYNLQTDACSLYTTRAASVRSFVNGYADWPKDLPWLYYRSDEAQFVLAEKDFETVFEFGRSVSVCPDLDCVRCEFDETRMHA* # PASA_UPDATE: g12642.t1, single gene model update, valid-1, status:[pasa:asmbl_11,status:3], valid-1 NODE_1004_length_14851_cov_46.437 . gene 4101 8779 . + . ID=g12642;Name=g12642.t1 NODE_1004_length_14851_cov_46.437 . mRNA 4101 8779 . + . ID=g12642.t1;Parent=g12642;Name=g12642.t1 NODE_1004_length_14851_cov_46.437 . five_prime_UTR 4101 4666 . + . ID=g12642.t1.utr5p1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 4101 5887 . + . ID=g12642.t1.exon1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 4667 5887 . + 0 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 6234 6720 . + . ID=g12642.t1.exon2;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 6234 6720 . + 0 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 6989 7302 . + . ID=g12642.t1.exon3;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 6989 7302 . + 2 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 7572 7625 . + . ID=g12642.t1.exon4;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 7572 7625 . + 0 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 7810 8212 . + . ID=g12642.t1.exon5;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 7810 8212 . + 0 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . exon 8437 8779 . + . ID=g12642.t1.exon6;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . CDS 8437 8627 . + 2 ID=cds.g12642.t1;Parent=g12642.t1 NODE_1004_length_14851_cov_46.437 . three_prime_UTR 8628 8779 . + . ID=g12642.t1.utr3p1;Parent=g12642.t1 #PROT g12642.t1 g12642 MACCNEKKGERITRKEPGDALSGIAPRGLRSYITWWSVLVILVILAANVVLPIVVYNAVSDSENTKLTTAFNNEARSANTVVMTQIVRTIRAIANLRIAVFLQRDELTAEGFNSSVALLTRLEAVAAVAWIPRVSNAQKDAFENATRAINANSTIHGPSASGYATFAITELRNNSGNVSVVPVTSRPIYYPLTYLWPPLSARTLLGFDVASLPSFFGNVSSAISTGQPALFSDVSIITSGREKGILVYMPVYTTVNSPPPELRDQESLGVLASAASIQQLILTSGLNEEDIHIYLFDDHDVKLYATDSVASSGSSSIPAVYGLRYQNELPAADRNWTFVAVPTAALSNLYTSSNPALFAALTALGIFFLLVVALFGIRQLVQAKYRTALSENRRKRVNAMIGYVNHELRNPLQGVIGLVEHATMTTKNVLRATSPSKERIKTVLGDLQDTSQMCELMCHLVDDALDIRKLEEGRLVIRLEVVYLDRIISDVAAIVQSKLTEKQRLTLEVRLFESDVALLCDPMRVKQLLLNLISNSIKYSDVGPIILSVEQKTADGKPWLRFSVKDSGQGIPADKQSLVFSPFSQMSNAGGRHQGAGLGLYLCAMLVDALGGKIGFESTYGAGSTFWFEIPFIRKLQSEVGIESEISDDTPDVSTNDLHSLTPEALRLNAVIVDQPTMQSPCDIELTTMTGREEVDGPARAPLTTTVMTAADTPTTQSTNIPVPRDDSLPEMHTDTLPPVIDGVVGQISSSHDNARALKVALRGTHHLVCDDGRINRLVLRRYIEEICPEAVVDEAENGQQAIEVCADRDYCVIWMDIRMPFLDGIEATKRIRTCARHAHTPIIGVTGDVTAEEVSFYGQIGMNRVVSKPVTRKRMVQLLTDLIHEPQH* # ORIGINAL: g12643.t1 original gene structure, not modified by PASA NODE_1004_length_14851_cov_46.437 AUGUSTUS gene 9728 10806 . - . ID=g12643;Name=g12643.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS mRNA 9728 10806 . - . ID=g12643.t1;Parent=g12643;Name=g12643.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 10168 10806 . - . ID=g12643.t1.exon1;Parent=g12643.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 10168 10806 . - 0 ID=cds.g12643.t1;Parent=g12643.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS exon 9728 9961 . - . ID=g12643.t1.exon2;Parent=g12643.t1 NODE_1004_length_14851_cov_46.437 AUGUSTUS CDS 9728 9961 . - 0 ID=cds.g12643.t1;Parent=g12643.t1 #PROT g12643.t1 g12643 MSSDDCVLYECIGCEDCAVVSRPLRLWISPDAYSETQFLHDEIFGEDVYGIFSGRVVLDAQSTVVDVGANIGVFTIAAAVKMGIVVGLPVSVNHCAQPTSPAGAVGIYAIEPIPQNAAMLRRNVKFYGLSSSVLVLETACGAVSGESHVPFVLYPRMPGNSVRCTREQEKAELQTGCMASSYFEGGREEICASTTLAATFREHGIRRIDLLKIDVEGDEEDVLDGIAMFDWPKIRQIVVEVHRVGDRITRTINRLCDRGFIVDCASAPPCRNPNAVVIRGVRPTGRTTCT* # PASA_UPDATE: g12641.t1, single gene model update, valid-1, status:[pasa:asmbl_12,status:12], valid-1 NODE_1004_length_14851_cov_46.437 . gene 373 2586 . - . ID=g12641;Name=g12641.t1 NODE_1004_length_14851_cov_46.437 . mRNA 373 2586 . - . ID=g12641.t1;Parent=g12641;Name=g12641.t1 NODE_1004_length_14851_cov_46.437 . five_prime_UTR 2526 2586 . - . ID=g12641.t1.utr5p1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 2267 2586 . - . ID=g12641.t1.exon1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 2267 2525 . - 0 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 1925 2019 . - . ID=g12641.t1.exon2;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 1925 2019 . - 2 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 1394 1465 . - . ID=g12641.t1.exon3;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 1394 1465 . - 0 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 1125 1191 . - . ID=g12641.t1.exon4;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 1125 1191 . - 0 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 904 963 . - . ID=g12641.t1.exon5;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 904 963 . - 2 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . exon 373 621 . - . ID=g12641.t1.exon6;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . CDS 551 621 . - 2 ID=cds.g12641.t1;Parent=g12641.t1 NODE_1004_length_14851_cov_46.437 . three_prime_UTR 373 550 . - . ID=g12641.t1.utr3p1;Parent=g12641.t1 #PROT g12641.t1 g12641 MQSLRLMSLRLGAGRSPMSAIVQYNPAACVSARSLATSTADGTTTPTAAPSSSAPGGYTPGTNTFAAAPPKRNIISTQFLADLLSDDKRPTLKNSVASDKSAASSSVGLSQPSSKPRLNTIVSTTSAKRCFICSNNIIVDYKNVRLLSQFVSENTGSIIPRRVTGTCAKQQRAISNAIMRARQAGLMPYLYKTPRFTSNLEGIVWES* # ORIGINAL: g4832.t1 original gene structure, not modified by PASA NODE_530_length_21701_cov_42.9722 AUGUSTUS gene 8773 14255 . + . ID=g4832;Name=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS mRNA 8773 14255 . + . ID=g4832.t1;Parent=g4832;Name=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 8773 9716 . + . ID=g4832.t1.exon1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 8773 9716 . + 0 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 9912 10054 . + . ID=g4832.t1.exon2;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 9912 10054 . + 1 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 10284 10412 . + . ID=g4832.t1.exon3;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 10284 10412 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 10593 10702 . + . ID=g4832.t1.exon4;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 10593 10702 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 10910 11093 . + . ID=g4832.t1.exon5;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 10910 11093 . + 0 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 11222 11341 . + . ID=g4832.t1.exon6;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 11222 11341 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 11537 11666 . + . ID=g4832.t1.exon7;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 11537 11666 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 11833 12812 . + . ID=g4832.t1.exon8;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 11833 12812 . + 1 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 12983 13132 . + . ID=g4832.t1.exon9;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 12983 13132 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 13368 13643 . + . ID=g4832.t1.exon10;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 13368 13643 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 13762 14255 . + . ID=g4832.t1.exon11;Parent=g4832.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 13762 14255 . + 2 ID=cds.g4832.t1;Parent=g4832.t1 #PROT g4832.t1 g4832 MAALEHWLSINNEDVGDIDIDIFSATSRGHKRRPSADAVDRTGSSSGDGSPIPLQSVLMSPILRPEPTAEEIDMIKALVTPSAANDDDPDSDDDALAKCPRFVPDSMHDNFCGVCEREDKYHPVCSRFRDDGRNAACEQCGRHEFDHTPCSRYTAKAPSRSATNHGRGKQNVARTGSASSAALKGRHGTVQDDEEESDADDESEGRSMSSETEGSSSAREGEGDDGECSDTDARPCGRCGRHEEDHLEVCGRFEFDGGEQGEVTCTQCGRYAIDHDLCEYYEDGELAGWCDNCGRSEPDHALCKLFMARSEKADRCDSCGRHKADHPACVHYAPGPRGLCEQCGKGMGEHAWVSFLHTHLSSATFRHDSFADIRQSTPARWYVDGRDIYLAILDGLESATEEIFIAGWFLSPELYLDRDDPYKAVDTRLDRVLARKAAQGVKVYVLLWNETKLAFKLNSGNAQRVLEQLHPNIRVITHPGATGPINWSHHQKTVVVDQDIAFLGGLDLAFGRYDTHEHTPTDPCHLRTTWPGKDFYNPSLKGVENLHRPFEDSLDRTSQTRMPWHDVHVSVVGLAARDVAIAFIQRWNHHKVDMDCGPEYCLLVPKEWGPTSANYNNTSNDSDARDTDNGNDDRDTFDLGQPMLPVSGRESATPTPVTTTKPRANREASSVPISWLARMSAMRSSVMHEHTDGDASNDETMVAMAAASTAAVAAVTASFVSESEGVGTDDELFRTAPSSPESQRRMRASVQMNQHQPSGTAAITATGLSGPSVGIRRATHGGASVAFNFTSGTDKSQTRVKAALARLSSLPAVRSEAEKEPLHALLAHPSQWKERKGDDKDTTIQRPRSRASVTRREFKGIVPGPGGSTSGMHWTDCQVLRSMGEWSGGLATEQSIYKAYIDAIEKAEHFIYIENQYFISCTDPTRKSDGPVNLIAHAILNRLRRAIATKETFRCILVLPISPEGCYREDVVIRYTMHVQYKTLARGRHSMLAILKQEFPDVDLSDFVCVCSLRSHGLLNGRQASEQVYVHSKLIIVDDKITIIGSANINDRSMNGDRDSEIAVRLEDRDHVVTAMNGKPYKAGRFAHSLRCRLWREHLGCSTGSQTSHRIIDPIASTTYRDVWLATAAHNTALYEAAFLDIPSNRIPSIKALEGIVAKTTLTPGAARDAASAGDDPQAGLLGVKGHLVLYPKEFLHETLNLSLLDWGPHVVVQDKVFF* # ORIGINAL: g4831.t1 original gene structure, not modified by PASA NODE_530_length_21701_cov_42.9722 AUGUSTUS gene 3077 7076 . - . ID=g4831;Name=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS mRNA 3077 7076 . - . ID=g4831.t1;Parent=g4831;Name=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 5637 7076 . - . ID=g4831.t1.exon1;Parent=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 5637 7076 . - 0 ID=cds.g4831.t1;Parent=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 4113 5438 . - . ID=g4831.t1.exon2;Parent=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 4113 5438 . - 0 ID=cds.g4831.t1;Parent=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 3077 3862 . - . ID=g4831.t1.exon3;Parent=g4831.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 3077 3862 . - 0 ID=cds.g4831.t1;Parent=g4831.t1 #PROT g4831.t1 g4831 MLCARSLQRRRLWPVFLGALIVFGYTAHFLSTDIVPSPTGSAHTGEAHISEAVAVFDSKGSETLRRRRDGTSLIELDVKVFVYPLPQLYNGALLDASRKTNSRHICVCCKVFYGSEVAFHKTLLESPYVTSDPSEANFFYVPAYVSCLIKNGARIEGVNMPDLRQTSAFLEGALDYIRAKYPYWDRRGGEDHVWAFTQGYGAHLFGDFSKIRRSIFLVTNGQYSEMVYQPWKDIVIPGIHRAPPVFTAGGPGVPDSVANAEPVFHNKKHLVFWGGTIVNDTRYSTGVRQYISKHFVNEPGFLVQVSTGKWGDIFTPMYDSVFCLCPEGWWAWTPRPYEAILSGCIPVLLSDDLEYPFERFVDWQQISIKISPQRIADVPSILRGISAEQISAMQASIVRSWQYFHFTDNYQPGYVTDMILKELAQKKVALMPHTGNRLIRREYEEEWGFKRANTANSANSVQRRGAFLERIPVSSIMREKTDCDPTDPLRVKVRKSKSPTTERTHCHGSTTLEGGRQCTRAQNFGILLTPGANTHTLIDPYDHIFEIVPGAILSTEGVAMRGKDSSAMRASSITVAVQASVDRVFMHLAKLAGVWQGPISLAILVDNPENDELAVRSLVETNPTLQKWVDFHFVRRRRPTGDDGQVTFYPINMLRNVATQQVKSDWIMVLDLDVLPSSCMSAFMEQVRLAETAYASAYSTGTCPGLMAYVPPALELPENTPLQFAGRIGKTCTFLTKPAAVTALRTGGLRPMHMYFNPAYMPTNHSRWMVTNEFFEVNYSVRFEPYYIARSNIPLFNDSFVDRGGNFAQQVYHMFAAGYRFIILPDVFTIDIPHSVASRASGFQKSLSLWEDFVAYTSELYGVSQVNGVAKGPEYNAMKARLSLEVAKFPAAIYDKDVSKSLFGSGALRRNADAGQLAGKPKDGTTQFVLVTITFQRTELVKAILEHYCTLPSLWGIVIVWNNVGEPVPVESEFVPQCGKPIFFRPQGANLIANRYRSANLPPDAPDAVFLIDDDLIFGTEAVEFAFREWLSRQDQIVGFIPRSAKQKSGGVWEYGLQPDVDSDHEYHFILLGASFIHKKHFSTYWRSPDEVLSIVNSVMNCDDLAMNFAVAAETGLPPVWVDAQYSRRSATGQFQANVDHFKIRSECISQFVRIYKGNPLVPGSTVVRPVGKKFLRTMAHVN* # PASA_UPDATE: g4830.t1, single gene model update, valid-1, status:[pasa:asmbl_7994,status:3], valid-1 NODE_530_length_21701_cov_42.9722 . gene 113 2978 . + . ID=g4830;Name=g4830.t1 NODE_530_length_21701_cov_42.9722 . mRNA 113 2978 . + . ID=g4830.t1;Parent=g4830;Name=g4830.t1 NODE_530_length_21701_cov_42.9722 . five_prime_UTR 113 191 . + . ID=g4830.t1.utr5p1;Parent=g4830.t1 NODE_530_length_21701_cov_42.9722 . exon 113 2978 . + . ID=g4830.t1.exon1;Parent=g4830.t1 NODE_530_length_21701_cov_42.9722 . CDS 192 2873 . + 0 ID=cds.g4830.t1;Parent=g4830.t1 NODE_530_length_21701_cov_42.9722 . three_prime_UTR 2874 2978 . + . ID=g4830.t1.utr3p1;Parent=g4830.t1 #PROT g4830.t1 g4830 MVVLPYPHCGLLYIIRPPNVAPIYAPVPLRSVLVEGKVVDMVAEVKVIQEYENRESLPIEATYVFPLDEKSAVFEFTAEVDGRIVNGVVRPKEIARAEYEHAVAQGQSAYLLEESRADVFEVSVGNLQPGKTAKISISYVTELALETDRIKFVLPTAVAPRYSPAGETDPIPSITYSGGKSPYALKLDLLIEMPLGITAVTSPTHAITYKRTNDHLGEASLTFSTTSMDRDLVVLVATPSAHEHRAVFESDGTDTAAMVTLVPRFELDDVKTEIIFVIDRSGSMEGSQIAQAANAMRIFLRSLPPDCYFNIVGFGSSYEFLFKESAKYDDKSMATASTHAQSLQADLGGTELLNPMEAILKRPQIKGYPRQVFVLTDGQISNTDQVISLVTKHSDTTRVFALGIGHSVSRHLVEGLARAGKGTAQFVVDGESMEAKVMRQLKHAIQPALSDVRIDWGESTAPAPAAATAPEATQEPPKRSLLGYRKPSVPKASTVPPPTWSMQAPFTLPPVFDGERFIAYCIFRGVRSAPATVKVVANSPDGPLEAELKVGEDNCFEGNTVHRLAARTLIRDLEEDRSYMHKAPGVVTPTSQAVDAEVERLALKYSLASRRTAFVAVDPTRPSDFSLYHCHYGPMQRPVPVASASSNLMYHGLCPSPPGGAMMMKCSAAPPQKKKSGAGLMGMVGSMFGGGGGGALRSTPPSAPSAAPTVQASRSRSAGASAAIDSSFARDMNCAPAPVMMKESCRKEQANVCDDEQEEALCADFSAPPPPPPASFAAAPPMAELAKLSVASANSFSGVISAQKFDGSFNESLLASIGASDASFSAAYATSGATSRDQWLTAVAVVYMEMRLASRKDEWELMANKATKWLRARSGCPDADATLAAARAFVMTL* # PASA_UPDATE: g4835.t1, single gene model update, valid-1, status:[pasa:asmbl_7996,status:12], valid-1 NODE_530_length_21701_cov_42.9722 . gene 19728 21599 . - . ID=g4835;Name=g4835.t1 NODE_530_length_21701_cov_42.9722 . mRNA 19728 21599 . - . ID=g4835.t1;Parent=g4835;Name=g4835.t1 NODE_530_length_21701_cov_42.9722 . exon 21574 21599 . - . ID=g4835.t1.exon1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . CDS 21574 21599 . - 0 ID=cds.g4835.t1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . exon 21273 21412 . - . ID=g4835.t1.exon2;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . CDS 21273 21412 . - 1 ID=cds.g4835.t1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . exon 20771 20958 . - . ID=g4835.t1.exon3;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . CDS 20771 20958 . - 2 ID=cds.g4835.t1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . exon 20411 20545 . - . ID=g4835.t1.exon4;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . CDS 20411 20545 . - 0 ID=cds.g4835.t1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . exon 19728 20038 . - . ID=g4835.t1.exon5;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . CDS 19847 20038 . - 0 ID=cds.g4835.t1;Parent=g4835.t1 NODE_530_length_21701_cov_42.9722 . three_prime_UTR 19728 19846 . - . ID=g4835.t1.utr3p1;Parent=g4835.t1 #PROT g4835.t1 g4835 MYYQCQCLGDLKPENILLDSQGHIVLTDFGLCKENMEDGAQTKTFCGTAEYLAPEILRGVGYGKEVDWWSLGILLYEMMSGLPPFYSENTNLMYKKILYQEMQFPETFSKDSIDLLKGLIQRTPQERLGYNGAEEVKRHAFFKAINWEKLSQKKLLPPFKPEVKSDTDVSNFDAEFTGEKPVDSYTQPNRLTGSQQAEFDGFSYINADESLARTMREKASIHSPSP* # PASA_UPDATE: g4833.t1, single gene model update, valid-1, status:[pasa:asmbl_7995,status:3], valid-1 NODE_530_length_21701_cov_42.9722 . gene 14703 16115 . - . ID=g4833;Name=g4833.t1 NODE_530_length_21701_cov_42.9722 . mRNA 14703 16115 . - . ID=g4833.t1;Parent=g4833;Name=g4833.t1 NODE_530_length_21701_cov_42.9722 . five_prime_UTR 15965 16115 . - . ID=g4833.t1.utr5p1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . exon 15839 16115 . - . ID=g4833.t1.exon1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . CDS 15839 15964 . - 0 ID=cds.g4833.t1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . exon 15630 15690 . - . ID=g4833.t1.exon2;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . CDS 15630 15690 . - 0 ID=cds.g4833.t1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . exon 15315 15490 . - . ID=g4833.t1.exon3;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . CDS 15315 15490 . - 2 ID=cds.g4833.t1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . exon 14703 14980 . - . ID=g4833.t1.exon4;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . CDS 14723 14980 . - 0 ID=cds.g4833.t1;Parent=g4833.t1 NODE_530_length_21701_cov_42.9722 . three_prime_UTR 14703 14722 . - . ID=g4833.t1.utr3p1;Parent=g4833.t1 #PROT g4833.t1 g4833 MASSAVLDVEGDMAPPEQTEEDDHLDTLDEPVSVTIKRDALMVAKKFLQILSPRADKRILHDWDLWGPLILCVTLAMILRESASESQKSLVFSGVFVIVWCGAGVVTLNSKLLGGNINFFQSVCVLGYCIFPLTISAVLGDIAASVFQFAWMRFTVVGVGFAWSIFASIGFLGGSQPQNRKALAVYPIVLFYFVIAWLIVVQPRTH* # ORIGINAL: g4834.t1 original gene structure, not modified by PASA NODE_530_length_21701_cov_42.9722 AUGUSTUS gene 16653 19374 . + . ID=g4834;Name=g4834.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS mRNA 16653 19374 . + . ID=g4834.t1;Parent=g4834;Name=g4834.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 16653 17036 . + . ID=g4834.t1.exon1;Parent=g4834.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 16653 17036 . + 0 ID=cds.g4834.t1;Parent=g4834.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS exon 17275 19374 . + . ID=g4834.t1.exon2;Parent=g4834.t1 NODE_530_length_21701_cov_42.9722 AUGUSTUS CDS 17275 19374 . + 0 ID=cds.g4834.t1;Parent=g4834.t1 #PROT g4834.t1 g4834 MLIPSAATARRRRFQFLFGGTLIGLCIFGLNFMWGKKAGLEDLRPAEDLSVSREREVDIALGSSRASPNDEKGKSDKRDDGRSAAVPATHKGGVWLVVPAASEQVAVILASSGECHKDSQQTFGLRYTTQVAQLLTGLAKNAPGAIAFRRALASMYAIRHNATCIVECNDVCDFGVLLTDQHVMRSCSGVERCPQAGTLQTDHNTKKRRRSLVYEVVSGQQNPADETLHPAGHRKREASPFLNTYAAFGMTSIAPRGFPQGKFNWRNRVSSFEALSEERCVAGTEDRSCFGSGAWSCPRFEVAHLIPATIDIEKDRPLLQADDGYGPFPPIGGATRSFDNERATHHPFVMPGVMSIITADTAIVWPRESFWGLVLPPSLINDGDAHDAELVRGLWVQRAMWDAGGAVSHAVVSGIRPAAVLRGHQSGKTDSHVSTNPNLADVINDVLLQWKGGVDTPFRERLSVLWSHLQSATRRLGVFALSTTDESIHNSWLIDLDTFGYSFPEYISENAASLYAPSTRAAVNIHAHARLTLHDATAIVTFNFPPWTLEVIGFVAGLYERMFHRVYYVGPPHDNATTAATLRSRFGYIEYDDLASGWLLYAGIARVLNGTASSDVGYALLADDMGLHRSLFASNDEDLAKFWFQAPGGVRSIHIGPGRNISAVTSKCGKWMRLEHEQNVIGKDGQHAQLHIGVGSGVAMYYSENSLLSKELKKVLPFGILPDCAPADFMYVPAHERVSVVSLFADAFRFSIGFEFLAGILQTYYAKTREGNVRTLNSIRNWGLNRSSVEVVMGSLEAGFDTVHPVKFSQTLLRDVIVKYYVRSHIL* # ORIGINAL: g6935.t1 original gene structure, not modified by PASA NODE_3138_length_4228_cov_38.6062 AUGUSTUS gene 104 2461 . - . ID=g6935;Name=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS mRNA 104 2461 . - . ID=g6935.t1;Parent=g6935;Name=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS exon 1349 2461 . - . ID=g6935.t1.exon1;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS CDS 1349 2461 . - 0 ID=cds.g6935.t1;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS exon 1036 1143 . - . ID=g6935.t1.exon2;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS CDS 1036 1143 . - 0 ID=cds.g6935.t1;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS exon 620 806 . - . ID=g6935.t1.exon3;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS CDS 620 806 . - 0 ID=cds.g6935.t1;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS exon 104 341 . - . ID=g6935.t1.exon4;Parent=g6935.t1 NODE_3138_length_4228_cov_38.6062 AUGUSTUS CDS 104 341 . - 2 ID=cds.g6935.t1;Parent=g6935.t1 #PROT g6935.t1 g6935 MAETAAADSVSSLPAKPTPVRASIYANGSPVRAAANGSLMTIGRTARVPGEVVAAMDVLCNLLDQPNDEDKRTALNEIVNVFKKDREKRDAVRECAVSQGIFRKVVGLAQFSSSVPVLIDVLRVLNWILSGDHPSVRADFYDLDGFAITMALCNQGDPEVLARALDVIAKVVSSSSEACKRFIENAGLDMLSEKCQTLAHDEVGVSQKISNLLMTIVAAGGLWTRAALLRQRIAEWLFVLAFSTNAQTQYLARMSYAILYIDQSGQQRLRNTGVPALLSNFVATYDPRSFDHIYGRNSVRFLTLFVPLLESTVSELQLFGAFHFAVQANYAKRTSKTAEALLKETGAMLPLNALVKSRHAGVVRYATMALRDSGQEVLDNTFSLKFKGWSADDVTKWLGMIGMAQYSDAFMRNGVDGKLLVDLTAADLENDLGVGSRLHRRRLLMEIGELKEAYDIEAQDPDGVCAWLTGIGPEMAQYKHAFMQCGINRPVLLAISDTELKDWVGIDNGLHRKKILAAVAELGGGENLKRTNGSSGPSVFSEDDVGPA # ORIGINAL: g11596.t1 original gene structure, not modified by PASA NODE_3913_length_2522_cov_37.6698 AUGUSTUS gene 288 2361 . - . ID=g11596;Name=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS mRNA 288 2361 . - . ID=g11596.t1;Parent=g11596;Name=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS exon 2161 2361 . - . ID=g11596.t1.exon1;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS CDS 2161 2361 . - 1 ID=cds.g11596.t1;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS exon 1710 1870 . - . ID=g11596.t1.exon2;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS CDS 1710 1870 . - 1 ID=cds.g11596.t1;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS exon 1264 1367 . - . ID=g11596.t1.exon3;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS CDS 1264 1367 . - 2 ID=cds.g11596.t1;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS exon 804 846 . - . ID=g11596.t1.exon4;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS CDS 804 846 . - 0 ID=cds.g11596.t1;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS exon 288 565 . - . ID=g11596.t1.exon5;Parent=g11596.t1 NODE_3913_length_2522_cov_37.6698 AUGUSTUS CDS 288 565 . - 2 ID=cds.g11596.t1;Parent=g11596.t1 #PROT g11596.t1 g11596 SRPLTAVPGDTSVSIGGGVGIFANDVFLSTVIELIEIISRDNTARSRGASGSSYGILAASSNGLIVRRCAIFAARGQNGTDGAAHTPSQAGAGHPGTSGASGCQSGPWYNPLCSSCSSPSVGSSGAGCVPEYRGGNGGVPGDGGSAGSPGADAPSGGGGGGVGASARIGAVKADASTYGRQGTNGAKGTDASPPIWQFSPSGGGCDFSVEAMAGAPGLGGGGGGGGGGGDSGVRGKCDSYGSSGGGGGGGGCGGLVSVRVL* # ORIGINAL: g9544.t1 original gene structure, not modified by PASA NODE_543_length_21519_cov_44.1243 AUGUSTUS gene 15667 17963 . - . ID=g9544;Name=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS mRNA 15667 17963 . - . ID=g9544.t1;Parent=g9544;Name=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 17895 17963 . - . ID=g9544.t1.exon1;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 17895 17963 . - 0 ID=cds.g9544.t1;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 17127 17316 . - . ID=g9544.t1.exon2;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 17127 17316 . - 0 ID=cds.g9544.t1;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 16997 17032 . - . ID=g9544.t1.exon3;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 16997 17032 . - 2 ID=cds.g9544.t1;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 15667 16706 . - . ID=g9544.t1.exon4;Parent=g9544.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 15667 16706 . - 2 ID=cds.g9544.t1;Parent=g9544.t1 #PROT g9544.t1 g9544 MPSASNVEKWCKLVPKEFVFHFKAYGLFAQQAMSVPSLPYVVKQMMPTELLSSQTLTLASLPEACKTAAWSAYNAALLPAHTAGKLVYGFALAYVFIAGAVVLQFHVGFKPTEANREHICYCRRELDGRYTMAVEFRDRAWLWSCDTEQCVADDGGRAGVLSDSDNDGQLSDSLRINGGNVDGQGSQKEKWSFSDTLDFLRSHSIVYICADELQREMPNQSHVASDAVVPIRAGVASRAMAYVRLHRRQGTERLLAPDELSRWAARIQTLSRTVDGPIYFLLSTAHEDQAIVNAKRLAGALGPLAFDWQSHYREAQRKKGGLLSFVTADKKGQRRATEVPTSDGDADGACTGQLTDLVDQQPAKRRRTHSENHVHPDEDQYYQQQQQQPQQQQQQHQQQQQQHASNRTAHAPASVSSTWKSPVKKTNGPPKGVPQITSFFAKKG* # ORIGINAL: g9542.t1 original gene structure, not modified by PASA NODE_543_length_21519_cov_44.1243 AUGUSTUS gene 8727 9797 . + . ID=g9542;Name=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS mRNA 8727 9797 . + . ID=g9542.t1;Parent=g9542;Name=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 8727 8877 . + . ID=g9542.t1.exon1;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 8727 8877 . + 0 ID=cds.g9542.t1;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 9061 9132 . + . ID=g9542.t1.exon2;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 9061 9132 . + 2 ID=cds.g9542.t1;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 9267 9412 . + . ID=g9542.t1.exon3;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 9267 9412 . + 2 ID=cds.g9542.t1;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 9714 9797 . + . ID=g9542.t1.exon4;Parent=g9542.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 9714 9797 . + 0 ID=cds.g9542.t1;Parent=g9542.t1 #PROT g9542.t1 g9542 MASFKFIAIAAVLLLAAFANAAPAVEIVEIASDEAAEESIEERSVEGAAAAAKTYTVSGSGDKFTPSSVTLKVGDSIQWTHMSSHNVRQINQIAGGCGLAAVTPNGFFSGTVAQTKLKPFIHKFTKKGTFHYRCDVSALSASDLRCVFPF* # ORIGINAL: g9541.t1 original gene structure, not modified by PASA NODE_543_length_21519_cov_44.1243 AUGUSTUS gene 2293 6776 . - . ID=g9541;Name=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS mRNA 2293 6776 . - . ID=g9541.t1;Parent=g9541;Name=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 6718 6776 . - . ID=g9541.t1.exon1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 6718 6776 . - 0 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 6196 6347 . - . ID=g9541.t1.exon2;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 6196 6347 . - 1 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 5868 5980 . - . ID=g9541.t1.exon3;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 5868 5980 . - 2 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 5296 5368 . - . ID=g9541.t1.exon4;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 5296 5368 . - 0 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 4899 4964 . - . ID=g9541.t1.exon5;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 4899 4964 . - 2 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 3712 4704 . - . ID=g9541.t1.exon6;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 3712 4704 . - 2 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 3427 3558 . - . ID=g9541.t1.exon7;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 3427 3558 . - 2 ID=cds.g9541.t1;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 2293 3164 . - . ID=g9541.t1.exon8;Parent=g9541.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 2293 3164 . - 2 ID=cds.g9541.t1;Parent=g9541.t1 #PROT g9541.t1 g9541 MPVGFTNCVTLIASKVNLYWTVDSTNSRLYIGLERKFATSGTHDNFYIAMGISPDGSMLGTDAFVVGTAGGTPFASDFTLQAYGTCAQGGACPDATMASSDTYNNAVYTSSESTTTVKFLAGYRPLAKHDIYDMAVTPSSTQNVVYAYGSLSASTLPPVLVQHTDMGSITLKFGTAQKTCTPFMTFADPPVTTTQVAKVTATTAVKSSSTIASITTRTVAPSATTGAAVQASATTGAAVQASATTGAVVQASATTGAAVQASATTGAVVQASATTGAVVQASATTGAAVQVTDTSGIVVATTGAAVQVTDTSAAGAASPDATVTSQSAGTDTAVNGGSSALQSGTATPDASIANNAASSAAATDQAVSATPDAPSASASASEIAVDSATTSASDASATDGGDAGGGGVQPGATTTAAGAPTATSTSGAVDPACNPATSECTITLRDGSVRCYEKCATLPFGGTYKMYWTIDGDYVDMSVSLDNPSGWVAIAFPGSGSKMKGAFAVMGFSTVDGDSVQQYILGDHVIGSADDDDNHLSLSNRDVFSINGFVTMTFRRPIAPAGAPVMHFDGQSTNLLWSSGGVDGGEIAPHSDSGRRAGSINFYVSNSVAVKSEVDYRTPHGALMVACWGILLPIGVLIARYMRMHDPLWFKLHRAIQTVGILGATAGFGLGLYMGDGTNKAHRGIGICVMVIGYMQVANGILRVHKGKPLRRHWEILHKGLGRSALILAVANIYIGFDILNLSTNLLLGLYSAAVGLIVLTFVSLHFVIGPPGAGLQGTASGKSMDVTPTDGDVRGQPKVDDVIAMTVVVEAPAGETSV* # ORIGINAL: g9540.t1 original gene structure, not modified by PASA NODE_543_length_21519_cov_44.1243 AUGUSTUS gene 1 1374 . - . ID=g9540;Name=g9540.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS mRNA 1 1374 . - . ID=g9540.t1;Parent=g9540;Name=g9540.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 1030 1374 . - . ID=g9540.t1.exon1;Parent=g9540.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 1030 1374 . - 0 ID=cds.g9540.t1;Parent=g9540.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS exon 1 815 . - . ID=g9540.t1.exon2;Parent=g9540.t1 NODE_543_length_21519_cov_44.1243 AUGUSTUS CDS 1 815 . - 0 ID=cds.g9540.t1;Parent=g9540.t1 #PROT g9540.t1 g9540 MAATCTARSIAAVNIMSTVVMALILVAVAGRAEAATTWTVTCIGATFSPSTVTIVAGDSVQWTALADNFHNVVQMSSQSNCNSQTKNGFTSGDAGTVDTFKVAFNTVGTFFYECEPHCSIGMKGKVVVLENPAVSVASVSSVSAKSAALYSSSAAVKASGASASSRAAVSAASASSANARLAASASATSVASVRAAATAVAAQSVASVASAVSAASVASAVSAASVAQADADAAAASASEYYYEVSASQEAAAEASAETASALAFQAALSAASVASVLQASATIVAQQSASSVASVASVAAAASASAAAANADFAASVARVSATSVAQQSASSVASVASVAAAVSASAAANGAQQSAASVASVAAAVSASAAAANADFAASVARVS # PASA_UPDATE: g9543.t1, single gene model update, valid-1, status:[pasa:asmbl_8074,status:12], valid-1 NODE_543_length_21519_cov_44.1243 . gene 13535 15323 . + . ID=g9543;Name=g9543.t1 NODE_543_length_21519_cov_44.1243 . mRNA 13535 15323 . + . ID=g9543.t1;Parent=g9543;Name=g9543.t1 NODE_543_length_21519_cov_44.1243 . five_prime_UTR 13535 13538 . + . ID=g9543.t1.utr5p1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . exon 13535 13782 . + . ID=g9543.t1.exon1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . CDS 13539 13782 . + 0 ID=cds.g9543.t1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . exon 14203 14243 . + . ID=g9543.t1.exon2;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . CDS 14203 14243 . + 2 ID=cds.g9543.t1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . exon 14473 14550 . + . ID=g9543.t1.exon3;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . CDS 14473 14550 . + 0 ID=cds.g9543.t1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . exon 14821 14938 . + . ID=g9543.t1.exon4;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . CDS 14821 14938 . + 0 ID=cds.g9543.t1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . exon 15109 15323 . + . ID=g9543.t1.exon5;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . CDS 15109 15158 . + 2 ID=cds.g9543.t1;Parent=g9543.t1 NODE_543_length_21519_cov_44.1243 . three_prime_UTR 15159 15323 . + . ID=g9543.t1.utr3p1;Parent=g9543.t1 #PROT g9543.t1 g9543 MPAAATKAQLTAKSSDSAHCRKSSKTSKRSVYCHTEKMSAHLALATDLFNGCETGKGHAPFVSSILADAPFECDAIPDVKTVYAYFDWMQGFNTGISNDFKFTIDSVTSNDTDVTFVATFTATHTGPSGPVTPPTGKSTKGMYTYTFRFNSDGKVVKMIKVFDVYTAFKGLGWPLP* # PASA_UPDATE: g8148.t1, single gene model update, valid-1, status:[pasa:asmbl_8869,status:12], valid-1 NODE_685_length_19105_cov_50.6821 . gene 85 3657 . - . ID=g8148;Name=g8148.t1 NODE_685_length_19105_cov_50.6821 . mRNA 85 3657 . - . ID=g8148.t1;Parent=g8148;Name=g8148.t1 NODE_685_length_19105_cov_50.6821 . five_prime_UTR 3486 3657 . - . ID=g8148.t1.utr5p1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . five_prime_UTR 3335 3360 . - . ID=g8148.t1.utr5p2;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 3486 3657 . - . ID=g8148.t1.exon1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 3293 3360 . - . ID=g8148.t1.exon2;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 3293 3334 . - 0 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 3025 3134 . - . ID=g8148.t1.exon3;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 3025 3134 . - 0 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 2649 2750 . - . ID=g8148.t1.exon4;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 2649 2750 . - 1 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 2226 2391 . - . ID=g8148.t1.exon5;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 2226 2391 . - 1 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 1104 1879 . - . ID=g8148.t1.exon6;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 1104 1879 . - 0 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 611 791 . - . ID=g8148.t1.exon7;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 611 791 . - 1 ID=cds.g8148.t1;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . exon 85 307 . - . ID=g8148.t1.exon8;Parent=g8148.t1 NODE_685_length_19105_cov_50.6821 . CDS 85 307 . - 0 ID=cds.g8148.t1;Parent=g8148.t1;3_prime_partial=true #PROT g8148.t1 g8148 MSSLLAIELKKTDKVDYGETLRNYIATQCGQDAAAYADPIAQLDNLRQSVRSFEKHESSLLQMQKYYGVTSFLGLKFPIDENQIRINFSWYEVFASPKSGGLFAASPSSQPKVSSFSLQYERACVLFNIAALQSQLGGGQSITSDAGLKAAATYFQASAGTLLHLADVVSKSILPQSADFARDLLSALSGAMLAQAQECVFQKAVVGKMRDAVLCKLAAQASDYYESAANQLRSSGSKSPSIEKSWVPFLLAKAQYMLALAHFHDAVTAKTTDAFGLEIGRLHSAEVALADVVKMKVAAVDAAPLLDRVRRMLSQATKDNDVIYHEHVPSAAELPSLARVSMVKATPFAENAGDASMDLFSALVPFMAHQGAEIYKERRDSLVKEITRKLDEATTMANTILASMNLPAAIEALEQPVGLPPQVLEKSKRIRNDGGIAAVMQKLDGVSSARSANLDILKESERMLNGEESEDKSMRDQFKTNWRRTPSRELTVKLREELEKYRTVLEKAGNSDGIVRQKMAGIRDKIEVLDKPQ # ORIGINAL: g8150.t1 original gene structure, not modified by PASA NODE_685_length_19105_cov_50.6821 AUGUSTUS gene 7597 9861 . - . ID=g8150;Name=g8150.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS mRNA 7597 9861 . - . ID=g8150.t1;Parent=g8150;Name=g8150.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS exon 7597 9861 . - . ID=g8150.t1.exon1;Parent=g8150.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS CDS 7597 9861 . - 0 ID=cds.g8150.t1;Parent=g8150.t1 #PROT g8150.t1 g8150 MHTRGFQHVTLAVRDLARSEKFYEEILRLPKLKRPLFDFPGTWYDLGNGVELHLIVTDLTDRNGDGTKGRDRDPLLELSAGIHSQHVAIQVDSLADAQQWLSAIAAPFIVISPRVDGAQQLYLTDPDGHTWEIVQLPDGADLGHDKAWPEPIFVRGAVVSAENTLVSGAAVDILQRGGSAADAAIAANAVQSVIEPMNCGIGGDLMAFVMDGVGPHARMDAPVLIDSSGRSPLGLTKEMLRRLGHVDEMPERGPLTITTPGAVRGWCEMHRQFGRLQWSSLFDSAITVASEGFIVTRHIEKNWVFYDDVMDAADRGLMSRDSKAAFVRTYSIDGRKPRYGERMRNTALAGALRAIQAGGCDEFYAGNLTSIIVAELQAQGSAIDQRDFDAHRTRSVVKKPLQGTFRGRYDLYVPPPPAQGFVALEMLKMLEILAPTAASDSTSSRNRIADTTQETANYLHMLIEIKKAAYLDAAQLSGGDELKASSQALDDENMAVRTAAVRRALTTRRASRFSSNPTRFSRNPIEDTVGMAIADSRGMMVTLLQSVYHPFGSGVVVPSLGFVTNARAHLFALGDPSHPNHYAPGKQPFTTLMPTFLFRDGRPWMAYSGKGGDRQPQTLMQVVSNLVDRGMSLQAAINHPRFRHTGSEHPARFNITKYNSNPVHLRGGTVNFDNGGFGEAVERDLAARGHVITGLDFFHDSHFAVVNAIVADGQGGYKSATDFLRKPGLVASLSMGTDGDLSDVRLHILTRERD* # ORIGINAL: g8149.t1 original gene structure, not modified by PASA NODE_685_length_19105_cov_50.6821 AUGUSTUS gene 5099 7066 . + . ID=g8149;Name=g8149.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS mRNA 5099 7066 . + . ID=g8149.t1;Parent=g8149;Name=g8149.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS exon 5099 7066 . + . ID=g8149.t1.exon1;Parent=g8149.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS CDS 5099 7066 . + 0 ID=cds.g8149.t1;Parent=g8149.t1 #PROT g8149.t1 g8149 MAAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPENTVFDAKRLIGRRFDDAHVQADMKHWPFKVINDGTKPKIQVSYKGEDKTFTPEEISSMVLLKMKETAEAYLGKPVTQAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKVGGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRLVDHFVQEFKRKHKKDLTTNSRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELCADLFRGTLDPVEKCLRDAKMDKSSLQDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFSTYADNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVCFDIDANGILNVSALEKSTGKENKITITNDKGRLSKDDIERMVNEAEKYKKLDEEQRDKISAKNALESYAFNMKSTVEDEKIQGKISDADKQSILKKCEETIQWLERNQAAEKEEFEHHQKELEKLCNPIITKLYQGAGGAPGGMPGGMPGGMPGAAPGGRPSAGGDSGAGPTIEEVD* # ORIGINAL: g8152.t1 original gene structure, not modified by PASA NODE_685_length_19105_cov_50.6821 AUGUSTUS gene 13930 18832 . + . ID=g8152;Name=g8152.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS mRNA 13930 18832 . + . ID=g8152.t1;Parent=g8152;Name=g8152.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS exon 13930 14175 . + . ID=g8152.t1.exon1;Parent=g8152.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS CDS 13930 14175 . + 0 ID=cds.g8152.t1;Parent=g8152.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS exon 14366 18832 . + . ID=g8152.t1.exon2;Parent=g8152.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS CDS 14366 18832 . + 0 ID=cds.g8152.t1;Parent=g8152.t1 #PROT g8152.t1 g8152 MPFNVPLFGRSTKRKKDGAGQKQEEGDEVEYDAASVTSQGGANDENTSGTPDKKSKKKKMRFSLSFRKNKEKASGQSSQEKEIRAVALLDFQGEQPDQLSFPKGSILTNVVKVSEGWWEADYEGKRGKMPATYVQVWSPPLSMADSDATSLGGQSIDQAMQIDPATYASGGTADGDNLHNSLLRRRSSASFSVGGAPARRGSGSLSSSLPSGVLGVDAGVRSLPADDIGAHTASSNPSIGDDDLESGDVVFDDDTSLPDIDGNPYLSANAVVAASGHASVAISLATTPATTTTASEPMLTSNREIRALEKAALVDVVTRAPAADPNSRGDAGGADGGAVGPEQSTSRRESEQLRDRSRSIGSRGNSHAQLETGAPAKTAVIESSDDAHAAIEMERSASRPLSFEAEFDRRVLDLTDEELDAPSAAPAAATPVRRLSSHAIATDREAAAKNSVSDPAASRADSVARADLPVTTFAATSAATSSSPSKARLEDIIRRYDKGGDNNNKNNNNESHSGRLPSTAQPSSGHVDVISDPVSASKRRSSAFLSSLSDSVAKQHVTLQGGAQTDAHAHNSNNGGVHSDDEGAASDAQRRLDSAITNSDDTHHLRDVDKPPVTTSRPLQAHVSGALPPPMYRRSSTAESAGSSPERPPSTSIAAIARVLQEEAKVQPVVREHAASKTPPHTMYGVKVSPMRSRGGSVGSDMAYSSDDSEHPRARVKEDSSGRPVPLKSRRRSSESRGLPVGHDAHSAQSHSESEDDRRGDATSGGEGHDSSDYLGSSLGAVPASASASASAAKAATARASVEEGGVDDGPMDIGEVSQGRKLRIRETRLQEMLDDCVANLTFHPTIGRLAQSIERAEPLTERFETLEARRKERLERLVQEHVTRREVLDVAQCTFSPQTTDYLVTKARIDIQENYVAVTRRREELVARLREEREEVLHKEHTHRPELATYSEFLLRRSRDEPAHERLYYTAVQQREKMKRNAAEADMALAMEDRDFYIKGRAVPRRRSLDSTYGPQFTEELYRQAEDIKNKREERIRQDVADWNATHAIARASAHSDRIVNFAIERDLAEALERSGGNVRGILARDQLRDVFVQLGVFAGQRCSDVGRRKEEEDVLDVVWKVLLETQSVEDHMHHGGLVSFAEQDWVRVGIFVRFFDGVMRIRRDRDVKLRRAPSGETGGLPHAKHPNPNPAPGNQEDAQMGSDDGKIRKAERTPLQHRERAAQKTFATFILNTKAYSDSVFRRSHGRAAASARKAHRPPVYTFKPEIGERSSLIDTNMRLREVRGPMSNAAIVLASAGRNELLYHKRNDIRKQKEEHVRRGIEAELTPCTFSPEIGPTSYRVASADKRRQRVEEISRTYCDRHTNCMHTDRARLAAEAAECTFAPNLSDSFVTRPAPDPAPTARGYDESVERMELGRQQRAEVDHLLQTRGLPKKKFRRGSTAPFRFELDSLLGKAATHRDDTSRSPRRHAARTSDAPASVRRRTQSAGNVSVDSLRGQGASSSMSMSGAESEPVMFFVKVDLGRKVSGRIPVRRGDSATTLAREFVLTNGLKESLVDLLEDLIEQYIQ # ORIGINAL: g8151.t1 original gene structure, not modified by PASA NODE_685_length_19105_cov_50.6821 AUGUSTUS gene 12386 13039 . + . ID=g8151;Name=g8151.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS mRNA 12386 13039 . + . ID=g8151.t1;Parent=g8151;Name=g8151.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS exon 12386 13039 . + . ID=g8151.t1.exon1;Parent=g8151.t1 NODE_685_length_19105_cov_50.6821 AUGUSTUS CDS 12386 13039 . + 0 ID=cds.g8151.t1;Parent=g8151.t1 #PROT g8151.t1 g8151 MAAFIPMQSGQLRAIQHVPEAPAAPGETWRAGCVMVGGAGGGLHGPSGMYEQIGRRLAKSGVVAVRLDYRNANNLLACVDDTLGGVDYLVDSHDVTRVLLIGWSFGGAVVIRAATRHPVVIGAAAIATQTYGALDTVGRLGDQGKSLLLIHGSEDDCINDRCSKQLYALAAEPKDIVIFTGDNHGIHKHTEEAIEEICTWALRTLQGKDTTANKHEE* # PASA_UPDATE: g5355.t1, single gene model update, valid-1, status:[pasa:asmbl_9812,status:3], valid-1 NODE_880_length_16312_cov_39.0505 . gene 4300 7250 . - . ID=g5355;Name=g5355.t1 NODE_880_length_16312_cov_39.0505 . mRNA 4300 7250 . - . ID=g5355.t1;Parent=g5355;Name=g5355.t1 NODE_880_length_16312_cov_39.0505 . five_prime_UTR 7127 7250 . - . ID=g5355.t1.utr5p1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 7057 7250 . - . ID=g5355.t1.exon1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 7057 7126 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 6847 6899 . - . ID=g5355.t1.exon2;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 6847 6899 . - 2 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 6560 6625 . - . ID=g5355.t1.exon3;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 6560 6625 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 6094 6224 . - . ID=g5355.t1.exon4;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 6094 6224 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 5684 5846 . - . ID=g5355.t1.exon5;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 5684 5846 . - 1 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 5381 5497 . - . ID=g5355.t1.exon6;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 5381 5497 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 5097 5201 . - . ID=g5355.t1.exon7;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 5097 5201 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 4815 4901 . - . ID=g5355.t1.exon8;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 4815 4901 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . exon 4300 4582 . - . ID=g5355.t1.exon9;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . CDS 4406 4582 . - 0 ID=cds.g5355.t1;Parent=g5355.t1 NODE_880_length_16312_cov_39.0505 . three_prime_UTR 4300 4405 . - . ID=g5355.t1.utr3p1;Parent=g5355.t1 #PROT g5355.t1 g5355 MVVVRPPERPAVHTHDPDEPCEECESARPNVEVVELSPDMEELDLTHALIPKIENLDKMINLRVLCLRQNRIKKIENLDGLPQLVELDLYDNQIEVIEGLDALVNLEHLDISFNAIRKIQGLESQTKVKKLFLANNKISKIENIDHMTGVTMLELGSNRIRVIENLDALTSLDNLFLGRNKISKMEGLDALVELTLISLQSNRVVKIEGLDTLHKLEELYISHNGIETLSGLDHVTNLHVLDVSSNRIKRITGVSHLTHLEEFWFNHNQLEEWRDVDHLAHARNIKTVYFEGNPIASDGQYRRKLKLALPSLRQIDATLVAV* # PASA_UPDATE: g5354.t1, single gene model update, valid-1, status:[pasa:asmbl_9810,status:12], valid-1 NODE_880_length_16312_cov_39.0505 . gene 2504 4172 . + . ID=g5354;Name=g5354.t1 NODE_880_length_16312_cov_39.0505 . mRNA 2504 4172 . + . ID=g5354.t1;Parent=g5354;Name=g5354.t1 NODE_880_length_16312_cov_39.0505 . five_prime_UTR 2504 2535 . + . ID=g5354.t1.utr5p1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 2504 2616 . + . ID=g5354.t1.exon1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 2536 2616 . + 0 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 2787 2837 . + . ID=g5354.t1.exon2;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 2787 2837 . + 0 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 2954 3059 . + . ID=g5354.t1.exon3;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 2954 3059 . + 0 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 3230 3263 . + . ID=g5354.t1.exon4;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 3230 3263 . + 2 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 3502 3572 . + . ID=g5354.t1.exon5;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 3502 3572 . + 1 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . exon 3896 4172 . + . ID=g5354.t1.exon6;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . CDS 3896 4092 . + 2 ID=cds.g5354.t1;Parent=g5354.t1 NODE_880_length_16312_cov_39.0505 . three_prime_UTR 4093 4172 . + . ID=g5354.t1.utr3p1;Parent=g5354.t1 #PROT g5354.t1 g5354 MRAAVIIVALLAAFAVAKKPELQIITDHKPDDCSQLAEAGDTLKVHYTGRLPDNSVFDSSRSEGREPFDLKLGQGMVIKGWDQGLVGMCPGEKRTLVIPPHLGYGSRGSPPVIPPNAILIFETELVSLTKAQKDYITPIVGFVSFFAPALAVVLAVYFLYRRAVGDKVSTQTRRGKKRS* # PASA_UPDATE: g5357.t1, single gene model update, valid-1, status:[pasa:asmbl_9813,status:12],[pasa:asmbl_9814,status:13], valid-1 NODE_880_length_16312_cov_39.0505 . gene 11383 16122 . - . ID=g5357;Name=g5357.t1 NODE_880_length_16312_cov_39.0505 . mRNA 11383 16122 . - . ID=g5357.t1;Parent=g5357;Name=g5357.t1 NODE_880_length_16312_cov_39.0505 . exon 13780 16122 . - . ID=g5357.t1.exon1;Parent=g5357.t1 NODE_880_length_16312_cov_39.0505 . CDS 13780 16122 . - 0 ID=cds.g5357.t1;Parent=g5357.t1;5_prime_partial=true NODE_880_length_16312_cov_39.0505 . exon 13413 13587 . - . ID=g5357.t1.exon2;Parent=g5357.t1 NODE_880_length_16312_cov_39.0505 . CDS 13413 13587 . - 0 ID=cds.g5357.t1;Parent=g5357.t1 NODE_880_length_16312_cov_39.0505 . exon 11383 13125 . - . ID=g5357.t1.exon3;Parent=g5357.t1 NODE_880_length_16312_cov_39.0505 . CDS 12119 13125 . - 2 ID=cds.g5357.t1;Parent=g5357.t1 NODE_880_length_16312_cov_39.0505 . three_prime_UTR 11383 12118 . - . ID=g5357.t1.utr3p1;Parent=g5357.t1 #PROT g5357.t1 g5357 DLTSRIAPFARTAAAVELVIEKVRPDLVLVDGPGLIPFATSVAAYYTRIPIMHSGAGLERFDMAGDFPVELHKQVLTSTASFHLTRSEEDSDLLILSGVPAETVVFVGDTLGDSAAVAMSISAHDLDLPTGTPLDDDPAALSLPLVLPPLPVATQTERLLRLLRADASSTQSILLLVMHDKPPAEVDNPVAYYKYIFSALSSHVSANNGMQLIAISPRLGVGRRYFVMYLSGVESVVALDAFPGQRWWVNLVLRADLVLTDSMWILEEAESYARPVLWLAGTMGQNMSIVERVRSAMSGSVSASTQQSAPALPAESIVNSDAAKVPSQEFAAAVFRSARDVLNRNTTIGRSGWIERVRQMVAQEDLRRDEFAPQPNAIAAAKDAAAAAAPKPTGAPTGKPNKVKFELPADQPKLWTSPPESPRVSIVVPCYNGMPYLELAVRSLLYQTEPNFEAIFVDDGSTDTSVSYIESVKDARFRVLKLQHVGLPNALNAGMRVTRAPFITWGSADNVFLPKFLERLLALFNEFPEASYVHGQLIFMDSEDYISASALASRILSPFDMLYYWPGLAAFMWRREVFESVGFFDADLSGVEDWDYWLRIVETYPTVPRVLEGLYLYRTHKEQLSKTMAKAGQLALAEKALINKVAKRHGGFLDPKRLFPQIKTCVDQKRATAIGHFTLGFASSYARPVLKGYLLQDAVFSGFFERALAADPTFTPATICLAKAYGLASKWEPLAKLLESIKGKEATFTTPARVMLTHISNFLRSKQSTMFRAISCGTPQMLLTEEFSQRERELTDMYTKALSKKAIAIPNPRRPYRLAVIPSDPLDAYVRKGREHTLQDYYNPLGFFDEVYVFSPMESQRKKAWGMEIIPTKAEELQSRLKEFGIHTVRAYGGYWACDMAAKYKLPGVPVVCSVHDTADAYCCKEGVLQADFLWPVSNAVADKLIQKGVQRPKIWLFTNRVDMALFRPLDMNAAENVAFRDSFNERFPGKYRILHIGRKTEQKNPITLIRALAQLGPDYVLIMTGQGDESFLRNEAAAAGVTRQLHLIQTINNAELPYYLNMARAHCTPSLWEGFGVNFIEALATGQVVVTSDIGPMNEYITDGVSGLLVQDYKNPTALADALRRACTDEALRGVLKPMAREAALSFSKDRVDRWEVMLYRMVLNRAFKTGLY* # ORIGINAL: g5353.t1 original gene structure, not modified by PASA NODE_880_length_16312_cov_39.0505 AUGUSTUS gene 125 2035 . - . ID=g5353;Name=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS mRNA 125 2035 . - . ID=g5353.t1;Parent=g5353;Name=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 1971 2035 . - . ID=g5353.t1.exon1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 1971 2035 . - 0 ID=cds.g5353.t1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 1631 1732 . - . ID=g5353.t1.exon2;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 1631 1732 . - 1 ID=cds.g5353.t1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 1460 1503 . - . ID=g5353.t1.exon3;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 1460 1503 . - 1 ID=cds.g5353.t1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 1147 1271 . - . ID=g5353.t1.exon4;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 1147 1271 . - 2 ID=cds.g5353.t1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 726 781 . - . ID=g5353.t1.exon5;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 726 781 . - 0 ID=cds.g5353.t1;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 125 301 . - . ID=g5353.t1.exon6;Parent=g5353.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 125 301 . - 1 ID=cds.g5353.t1;Parent=g5353.t1 #PROT g5353.t1 g5353 MPDYTKDVFYNVEQFITALKRRQVQGSYPVAKETVLLLRIVVSQTRWQHAQELMQRIRTIGRRICSAMPSESAAGNMVRRVLHIIREEYAETQKTSLAQSDSGAAAGAGAKQTAAGLQNLLELENKDDFSRPVNNLKAAVIEGFKELLDELDNSADNIAVQSLEQIHSNEVIMTMGKSKTVEAFLKSAA # ORIGINAL: g5356.t1 original gene structure, not modified by PASA NODE_880_length_16312_cov_39.0505 AUGUSTUS gene 7612 10140 . + . ID=g5356;Name=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS mRNA 7612 10140 . + . ID=g5356.t1;Parent=g5356;Name=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 7612 7816 . + . ID=g5356.t1.exon1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 7612 7816 . + 0 ID=cds.g5356.t1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 8157 8252 . + . ID=g5356.t1.exon2;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 8157 8252 . + 2 ID=cds.g5356.t1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 8368 8803 . + . ID=g5356.t1.exon3;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 8368 8803 . + 2 ID=cds.g5356.t1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 8932 8981 . + . ID=g5356.t1.exon4;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 8932 8981 . + 1 ID=cds.g5356.t1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 9275 9399 . + . ID=g5356.t1.exon5;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 9275 9399 . + 2 ID=cds.g5356.t1;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS exon 9823 10140 . + . ID=g5356.t1.exon6;Parent=g5356.t1 NODE_880_length_16312_cov_39.0505 AUGUSTUS CDS 9823 10140 . + 0 ID=cds.g5356.t1;Parent=g5356.t1 #PROT g5356.t1 g5356 MSEQVAPLVEWTGSTLRIGDCISVPGEVSRGFIPLIELPTGDVVTLKVIIAKGKKDGPTLLLTANIHGVTGTLSVFRLIDQLDLSTLRGSLVCFPSINPTGLLAGTRYPAFESKDPNRLWPDSAAYAPADEPSSKHTNTPKDWLELYETMPKKCVGPQERAWEKVWAVLVGVRPDMHLDLHTFSVLSIPFVFLDRVLFDGKNPNALAEANDLYARTESLAKATGLTVVVEKPAERYTRDKLHRSTSGAMLNKGRVPACTIELGPMHCAPPALLNAGVTAIMNVMVAARMLDGLPTPITGVPVVTTDEPHRYIEWPRAPMTGIVDVLKQPGESFLAFEGLARIRRLDGTVVAIAAAPKETGGFVIGWWNGVARHFGESLGMVAVPDRMPMVVDWHTLPADCLRDDADRKD* # ORIGINAL: g2302.t1 original gene structure, not modified by PASA NODE_3884_length_2567_cov_36.4_potentialcontaminant AUGUSTUS gene 714 2441 . - . ID=g2302;Name=g2302.t1 NODE_3884_length_2567_cov_36.4_potentialcontaminant AUGUSTUS mRNA 714 2441 . - . ID=g2302.t1;Parent=g2302;Name=g2302.t1 NODE_3884_length_2567_cov_36.4_potentialcontaminant AUGUSTUS exon 714 2441 . - . ID=g2302.t1.exon1;Parent=g2302.t1 NODE_3884_length_2567_cov_36.4_potentialcontaminant AUGUSTUS CDS 714 2441 . - 0 ID=cds.g2302.t1;Parent=g2302.t1 #PROT g2302.t1 g2302 MSSSPAQLRSLIDDNFFSTVRSGVSNFLSQIAPMIRLTAGSDLTQLGTTKAVSNPTFLASYADVGTINNIGDLISNVGVITDWFSSVCIPLLASEIAMPTQWRTYKWDWKYSQGNSFNDSDASSADLKTFLASIQALNHPANEYGNFVPVYSAILLELGKILLNDGQSYEVTQGLYDALIALRDSMYLLLYTSSILEYIYDANYVATKFLDLANDQTKDINGNISAVSTEFTNYINTFEFRTAKAFLTAWYLFPVIKAKVDDVVANAANSEFKGACTVLKGFLENGDWNVLTNSTTVSGAIATHANQVFNVENVANIAPSPSPLRTLVYANFAFAYDANDASKVFYLFSKNYLTGFGYTNSAALSLMNACAGIWQLSPLFMAGLYANDGTSPTTTVSEIMTTSFWTKSITTNALLQLIAVDSNLAARLTSALNTNTDENTLLNFTDALTDGEIADKANLLAYFLTKFASIDASMKTAQDNIERELADETSLQNKLFTIKTNAGILTALKDKVVATKTSVTTTYNTYITRRDANDLVLASVVSNYTGDVNTIITSVDDIKTMHETVKAKSRWNGTF* # PASA_UPDATE: g5948.t1, single gene model update, valid-1, status:[pasa:asmbl_3613,status:12], valid-1 NODE_2141_length_7537_cov_42.5255 . gene 3901 7058 . - . ID=g5948;Name=g5948.t1 NODE_2141_length_7537_cov_42.5255 . mRNA 3901 7058 . - . ID=g5948.t1;Parent=g5948;Name=g5948.t1 NODE_2141_length_7537_cov_42.5255 . exon 6477 7058 . - . ID=g5948.t1.exon1;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . CDS 6477 7058 . - 0 ID=cds.g5948.t1;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . exon 6193 6374 . - . ID=g5948.t1.exon2;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . CDS 6193 6374 . - 0 ID=cds.g5948.t1;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . exon 5480 5860 . - . ID=g5948.t1.exon3;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . CDS 5480 5860 . - 1 ID=cds.g5948.t1;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . exon 3901 5074 . - . ID=g5948.t1.exon4;Parent=g5948.t1 NODE_2141_length_7537_cov_42.5255 . CDS 3901 5074 . - 1 ID=cds.g5948.t1;Parent=g5948.t1 #PROT g5948.t1 g5948 MLVLILVCSLSAIVWRSFKPNIQHFDYHSSGALHANRAPGNDPETDVRPKQNAVPHFDTNVVKRDNAKLMHNQSAEVSRAAVANDAPSDAPIVPRDTFVRRKVVPATVFDDMIKRGERAPAGRGRSHLPRVAADELARRYALALIDSRATDEEIERDFTVVVSLKEDNAILPYSLKAVLEHTPVGVRIIVVYSQPMGTGQLRAIEDAQAARPSAVEVHEISAYLANANLMRQYGADIATTPLIAFVHTCTMPQAGWLHAFHAAAKHNPDFKVFVPYLLNEIGDGTSTERRDRHEAASVVFQGLHPIARDQLGLLPGDRPLFRLIANGERRAMEPIRAAGAVPWYDALDIVGFHIAVFRREITPADYPGGPVFHPIGSEFFSHLPNGLLLLHMGVRALVIDTTEGLLAHGHFNFNIEDDGPTFAAYRGVEACESYGRYMQDEWGLSKSPRNCKRLADKVLGPVTAEYRPSPFAAMRAKLIITWASFVGWNRFAVTEIPRGGAVPNKAGGARDGGWAPARAERVDMSGVVLEDDAVGVIDALQRADQRCARGACHVRLVLDPASAPIKMRPSPFKRAAIETGQMVPIVPTTGNATVCFGEGPSPHPLPPVPKGDACVPIVYPPFAVVEVAVEHPETVAVSPILFDTSSLVVTTAVGNGQNRTYLWYHVRHDVTKNSRDTVIAAVAAAAREGGVSGGAGTTSVVVRTVSLCSTPNDSVMNGRQAGWEDACTAGVHVLGRSGSGELVDTWVEDWHLAKFRWSTLDVAGFQAAVKAP* # PASA_UPDATE: g5947.t1, single gene model update, valid-1, status:[pasa:asmbl_3614,status:12], valid-1 NODE_2141_length_7537_cov_42.5255 . gene 76 3317 . + . ID=g5947;Name=g5947.t1 NODE_2141_length_7537_cov_42.5255 . mRNA 76 3317 . + . ID=g5947.t1;Parent=g5947;Name=g5947.t1 NODE_2141_length_7537_cov_42.5255 . five_prime_UTR 76 77 . + . ID=g5947.t1.utr5p1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . exon 76 109 . + . ID=g5947.t1.exon1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . CDS 78 109 . + 0 ID=cds.g5947.t1;Parent=g5947.t1;5_prime_partial=true NODE_2141_length_7537_cov_42.5255 . exon 356 437 . + . ID=g5947.t1.exon2;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . CDS 356 437 . + 1 ID=cds.g5947.t1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . exon 625 850 . + . ID=g5947.t1.exon3;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . CDS 625 850 . + 0 ID=cds.g5947.t1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . exon 1070 1347 . + . ID=g5947.t1.exon4;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . CDS 1070 1347 . + 2 ID=cds.g5947.t1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . exon 1486 3317 . + . ID=g5947.t1.exon5;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . CDS 1486 3273 . + 0 ID=cds.g5947.t1;Parent=g5947.t1 NODE_2141_length_7537_cov_42.5255 . three_prime_UTR 3274 3317 . + . ID=g5947.t1.utr3p1;Parent=g5947.t1 #PROT g5947.t1 g5947 FTPNESNVNGRELIRMHMLAHYKKLGTIKPGIDMTAPKSLSKAVKLNSKPRARLDYGAEASGLQRSASQASTRKTSSRPPTGMSTYAGGDSRMSSPSPAPRLDVATPDLSQRHFPVGTASGRASPTHSHHSHHSSLSRASRPRSPFDPSSSRPLSPHGQKQPGRLDYLKFVSEITSDILARGVFSDRAVDRICEQHITDHKADLDEAKMREMVKSLKRDLTVTHGIILADSVAASRAQSPMARSRQPSESAYSEKAPSEKGSFRGSEKAGSEKGSIRGTEKAASEKGSIRGSEKGATAALLAASAAEKRGDGSKPPSRKGSSASLAVEPVTIVKGDPMGESHTSMVSDVSSLADNEDLLLQSHSRDYDDVLKKVDELEEAASPRVRANDDGEEFPAHNATIASAHSEDEYGDDFEEEDKRSPSADNSDSDNDTAATAKRRSSSSEDEDASPVRGRPPVVVRRDGDQRIQSAKVRDDLEDDVDIVSAKPAQRRPKVSVPTDSEASEFESGHSRRREALAKRPSVHDLSDDDSDASSVRGRVPIGAASRKVSDAASDAGSQRGRGGDATKSVVGSTKGSDREDSASVRSVRNLDDVPVGPSRRSPFDDMPLPTSKKAKGDDGNASDVSGTSKASARSNATKKNVDTFDETPLPTTKKRDDDGNASDVSGISKASTRSKRVAADEKPPSFDETPIRPKDSAVADVSRKSSAASIRKAPAEEEGHVSDTSTRSAAVRKPSSLSVASSLPSSKKPASEPPSRKASPPSVKSLKHSSSASEHSDDDLDDSRSGAASDAAKDDEDDAF* # PASA_UPDATE: g11384.t1, single gene model update, valid-1, status:[pasa:asmbl_2227,status:3], valid-1 NODE_1642_length_10033_cov_40.8969 . gene 807 2965 . - . ID=g11384;Name=g11384.t1 NODE_1642_length_10033_cov_40.8969 . mRNA 807 2965 . - . ID=g11384.t1;Parent=g11384;Name=g11384.t1 NODE_1642_length_10033_cov_40.8969 . five_prime_UTR 2815 2965 . - . ID=g11384.t1.utr5p1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . exon 2729 2965 . - . ID=g11384.t1.exon1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . CDS 2729 2814 . - 0 ID=cds.g11384.t1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . exon 2339 2471 . - . ID=g11384.t1.exon2;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . CDS 2339 2471 . - 1 ID=cds.g11384.t1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . exon 1721 1864 . - . ID=g11384.t1.exon3;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . CDS 1721 1864 . - 0 ID=cds.g11384.t1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . exon 807 1468 . - . ID=g11384.t1.exon4;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . CDS 1196 1468 . - 0 ID=cds.g11384.t1;Parent=g11384.t1 NODE_1642_length_10033_cov_40.8969 . three_prime_UTR 807 1195 . - . ID=g11384.t1.utr3p1;Parent=g11384.t1 #PROT g11384.t1 g11384 MEHHVWITRHGERMDSIDEDWEETAERPWDPPLTDRGKEQARLTGVFLRDEGVSHVFSSPFLRCLQTADEIAKVLNVPVMVENGLSEFMTLQWFPKKPIILTSAEIAGAIEKYDGGVYKSQFEFKHPETIRDMGVRYMDTAKRLAQHHPEEGHTLLVTHGYGVQFGVQAFQPSSTIMATPYCCLSKLVKTPTSTDYKIHLLTDAAHWKDVL* # PASA_UPDATE: g11385.t1, single gene model update, valid-1, status:[pasa:asmbl_2226,status:3], valid-1 NODE_1642_length_10033_cov_40.8969 . gene 5414 8021 . + . ID=g11385;Name=g11385.t1 NODE_1642_length_10033_cov_40.8969 . mRNA 5414 8021 . + . ID=g11385.t1;Parent=g11385;Name=g11385.t1 NODE_1642_length_10033_cov_40.8969 . five_prime_UTR 5414 5744 . + . ID=g11385.t1.utr5p1;Parent=g11385.t1 NODE_1642_length_10033_cov_40.8969 . exon 5414 8021 . + . ID=g11385.t1.exon1;Parent=g11385.t1 NODE_1642_length_10033_cov_40.8969 . CDS 5745 7424 . + 0 ID=cds.g11385.t1;Parent=g11385.t1 NODE_1642_length_10033_cov_40.8969 . three_prime_UTR 7425 8021 . + . ID=g11385.t1.utr3p1;Parent=g11385.t1 #PROT g11385.t1 g11385 MIDNKGPAGFPVGFPLFNRSLSSDVSPRGALPVSASGTMSAQKDLAEEGQAGTEGMSSNRAGFVSVLLALLHDESLRSIIDWSTDGSYVLVFSVREFVDHIMPSFFKTSNVKSFVRQLNLYGFHKLSSKQLSQLVATEEGCGNPRLRRSPQHRPTAGPKVDAASIQASVDDLMGFFHVDFKRSDPDSWQKISRGRRPSLSGDPLPNLSLSPSNSVAMSSSSTFSTSGPLSSSPPAAGSPGRAPNGRITKRRGSLTRSNSTPIGIAVHAAAAAASGNGSLPTPATLTLRHAGSVVARTHSHTYGGEGAEERRGAHPGALVSVPPAVVNGDGQYHPHTQMRHSQSASAVKLRHDNTLSLVNTPPPLSSMLPWDTPYECVYEGHTTASENTQQEANDERENDVMHTSRRDVASVHVHMQPHHPLYSAVHVGGEHGHPSGDHDHFYVSPGQYIAHANNYGHNNMSINNINNNGHNNASFNGINNNGHSKFVAAQFHSDFCEPLQQLSLEDLNAAFDEASLLEYDIDLPQYRAAVGATAAELFQSVHMDNVYPYLHAADAEQTA* # ORIGINAL: g11386.t1 original gene structure, not modified by PASA NODE_1642_length_10033_cov_40.8969 AUGUSTUS gene 8459 9874 . + . ID=g11386;Name=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS mRNA 8459 9874 . + . ID=g11386.t1;Parent=g11386;Name=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS exon 8459 8549 . + . ID=g11386.t1.exon1;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS CDS 8459 8549 . + 0 ID=cds.g11386.t1;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS exon 8641 8895 . + . ID=g11386.t1.exon2;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS CDS 8641 8895 . + 2 ID=cds.g11386.t1;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS exon 9128 9366 . + . ID=g11386.t1.exon3;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS CDS 9128 9366 . + 2 ID=cds.g11386.t1;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS exon 9551 9874 . + . ID=g11386.t1.exon4;Parent=g11386.t1 NODE_1642_length_10033_cov_40.8969 AUGUSTUS CDS 9551 9874 . + 0 ID=cds.g11386.t1;Parent=g11386.t1 #PROT g11386.t1 g11386 MEESTSENSIRLTSEHYPDASKVTHFAIDIGGSLAKLAFITVGDAAQLPRHTDPIESQNRSAEELPLVAGSGDVQVHLNFLKFETKKIDKCVDFIRDYLLHKNNGEQPIVSLKATGGGAYKYIDLFESKLGLKVEKLDEMDCLITGCNFLLSKIPNEAFTYNRAAAVPYTYQDNVGHDIYPYLLVNIGSGVSIVKVLGEDTYERIGGTSLGGGTFWGLCSLLTHAEGFDNILELSAHGNHRGVDMLVGDIYGGHYSRIGLKADTIASSFGKATRLNKDAVDRNQLEADSCKSLLHMISNNIGQ # PASA_UPDATE: g10286.t1, single gene model update, valid-1, status:[pasa:asmbl_4108,status:12], valid-1 NODE_2350_length_6616_cov_40.9639 . gene 5197 6429 . - . ID=g10286;Name=g10286.t1 NODE_2350_length_6616_cov_40.9639 . mRNA 5197 6429 . - . ID=g10286.t1;Parent=g10286;Name=g10286.t1 NODE_2350_length_6616_cov_40.9639 . exon 6249 6429 . - . ID=g10286.t1.exon1;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . CDS 6249 6429 . - 0 ID=cds.g10286.t1;Parent=g10286.t1;5_prime_partial=true NODE_2350_length_6616_cov_40.9639 . exon 5978 6094 . - . ID=g10286.t1.exon2;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . CDS 5978 6094 . - 2 ID=cds.g10286.t1;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . exon 5663 5701 . - . ID=g10286.t1.exon3;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . CDS 5663 5701 . - 2 ID=cds.g10286.t1;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . exon 5197 5492 . - . ID=g10286.t1.exon4;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . CDS 5314 5492 . - 2 ID=cds.g10286.t1;Parent=g10286.t1 NODE_2350_length_6616_cov_40.9639 . three_prime_UTR 5197 5313 . - . ID=g10286.t1.utr3p1;Parent=g10286.t1 #PROT g10286.t1 g10286 IAVPHARAVELADALLGRPDVKLAGLGPRDSLRLEAGLCLYGNDIDESTTPVEAGLTWLIGKRRRTEGGFIGDKIILDQLKNGASRARVGLIVSGAPARGGADVVDDAGNVIGKVTSGSPSPTLKQNIAMAYVPKSHAARGTSVGVVVRGKKQGAVVSKMPFVPQRYYQKA* # PASA_UPDATE: g10284.t1, single gene model update, valid-1, status:[pasa:asmbl_4109,status:12], valid-1 NODE_2350_length_6616_cov_40.9639 . gene 13 657 . + . ID=g10284;Name=g10284.t1 NODE_2350_length_6616_cov_40.9639 . mRNA 13 657 . + . ID=g10284.t1;Parent=g10284;Name=g10284.t1 NODE_2350_length_6616_cov_40.9639 . five_prime_UTR 13 13 . + . ID=g10284.t1.utr5p1;Parent=g10284.t1 NODE_2350_length_6616_cov_40.9639 . exon 13 137 . + . ID=g10284.t1.exon1;Parent=g10284.t1 NODE_2350_length_6616_cov_40.9639 . CDS 14 137 . + 0 ID=cds.g10284.t1;Parent=g10284.t1;5_prime_partial=true NODE_2350_length_6616_cov_40.9639 . exon 250 384 . + . ID=g10284.t1.exon2;Parent=g10284.t1 NODE_2350_length_6616_cov_40.9639 . CDS 250 384 . + 2 ID=cds.g10284.t1;Parent=g10284.t1 NODE_2350_length_6616_cov_40.9639 . exon 512 657 . + . ID=g10284.t1.exon3;Parent=g10284.t1 NODE_2350_length_6616_cov_40.9639 . CDS 512 657 . + 2 ID=cds.g10284.t1;Parent=g10284.t1 #PROT g10284.t1 g10284 DVNPCGLFSKCSSPPNDNTTFACDCDALYISDSGTAVKDCRLATFCDLKRAYCGAFSSCVSTDALSGTCPCISAAYLPNADQRSCRVKTDCDDHPCFPEGIATCNVSSTNISISTCSCRDGYVADQVARFCKGG* # ORIGINAL: g10285.t1 original gene structure, not modified by PASA NODE_2350_length_6616_cov_40.9639 AUGUSTUS gene 2032 4382 . + . ID=g10285;Name=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS mRNA 2032 4382 . + . ID=g10285.t1;Parent=g10285;Name=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 2032 2064 . + . ID=g10285.t1.exon1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 2032 2064 . + 0 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 2225 2350 . + . ID=g10285.t1.exon2;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 2225 2350 . + 0 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 2589 2820 . + . ID=g10285.t1.exon3;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 2589 2820 . + 0 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 3153 3290 . + . ID=g10285.t1.exon4;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 3153 3290 . + 2 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 3639 3768 . + . ID=g10285.t1.exon5;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 3639 3768 . + 2 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 3915 4053 . + . ID=g10285.t1.exon6;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 3915 4053 . + 1 ID=cds.g10285.t1;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS exon 4356 4382 . + . ID=g10285.t1.exon7;Parent=g10285.t1 NODE_2350_length_6616_cov_40.9639 AUGUSTUS CDS 4356 4382 . + 0 ID=cds.g10285.t1;Parent=g10285.t1 #PROT g10285.t1 g10285 MASAGQGPSVASYGFDDDERQYLLRVPDSGLGGGREFRPIPTLWTAILESAIIIALVVTAFLRLGVDTSPFDADSPFQFFVTVHVGVWAVVAMCDIYFHYHHRVSRLSGYLTFYRQSQTARRIPFVVFSAGNGVIAILASLWDAGDEWQGLDRQNAFAILCAVEAVGTLPPLAYYTVQAYRFNKSRPRPDATDDWEQRAVNYSLGRSSNADATTSEMGFGDDVYVDEILEKQADMIRYLQQHNQTLSRRIVELAAQLDGLEGMPATLLLVSDVT* # PASA_UPDATE: g11807.t1, single gene model update, valid-1, status:[pasa:asmbl_7058,status:12], valid-1 NODE_4171_length_2076_cov_39.5197 . gene 135 1779 . + . ID=g11807;Name=g11807.t1 NODE_4171_length_2076_cov_39.5197 . mRNA 135 1779 . + . ID=g11807.t1;Parent=g11807;Name=g11807.t1 NODE_4171_length_2076_cov_39.5197 . exon 135 258 . + . ID=g11807.t1.exon1;Parent=g11807.t1 NODE_4171_length_2076_cov_39.5197 . CDS 135 258 . + 0 ID=cds.g11807.t1;Parent=g11807.t1;5_prime_partial=true NODE_4171_length_2076_cov_39.5197 . exon 470 591 . + . ID=g11807.t1.exon2;Parent=g11807.t1 NODE_4171_length_2076_cov_39.5197 . CDS 470 591 . + 2 ID=cds.g11807.t1;Parent=g11807.t1 NODE_4171_length_2076_cov_39.5197 . exon 881 1779 . + . ID=g11807.t1.exon3;Parent=g11807.t1 NODE_4171_length_2076_cov_39.5197 . CDS 881 1252 . + 0 ID=cds.g11807.t1;Parent=g11807.t1 NODE_4171_length_2076_cov_39.5197 . three_prime_UTR 1253 1779 . + . ID=g11807.t1.utr3p1;Parent=g11807.t1 #PROT g11807.t1 g11807 LVSRRRITALREIESILDPDHNFENYRKAFKSCSPPAIPVLCIMLKDLTSLNELPKRFKNDYVNFRKLRLIADRIDEFRKFQLSEYRSLSVDSRTHRYCENLEKLGDRELFRCSKYLEPRAIANAAPPRAGVSFAGAAQTQRKASTSAPSTPTAMSPVSTLMTAGLVRAPVPLATVALVSMEEQKGTFGRAAMRRVALDLARNDE* # ORIGINAL: g3127.t1 original gene structure, not modified by PASA NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS gene 43 993 . + . ID=g3127;Name=g3127.t1 NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS mRNA 43 993 . + . ID=g3127.t1;Parent=g3127;Name=g3127.t1 NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS exon 43 151 . + . ID=g3127.t1.exon1;Parent=g3127.t1 NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS CDS 43 151 . + 0 ID=cds.g3127.t1;Parent=g3127.t1 NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS exon 389 993 . + . ID=g3127.t1.exon2;Parent=g3127.t1 NODE_5156_length_993_cov_28.7843_potentialcontaminant AUGUSTUS CDS 389 993 . + 2 ID=cds.g3127.t1;Parent=g3127.t1 #PROT g3127.t1 g3127 VNTKSPAGKIFLDIIGVFLNAVQDTSVITQGLAVGCSVVVSIVGDVGGNSNDPYWSPTANSGLFASVADLKAALNTVGNAFITSLSNVFTSVASDPLRLRLAANTLQSVDIPNVGDVATLLNDNASVVIARLYRLLFAMYWQVCYTHLFYKRDKTYLNCANDKTDAYFPPSGRWYYASNNQNGAWVCPQGKYKDGVVPNYELYGSGFANEPGTYEQYIVENTMDGTTAGMVNDGWTTF # ORIGINAL: g13407.t1 original gene structure, not modified by PASA NODE_4183_length_2063_cov_33.1117 AUGUSTUS gene 45 1774 . - . ID=g13407;Name=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS mRNA 45 1774 . - . ID=g13407.t1;Parent=g13407;Name=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS exon 1624 1774 . - . ID=g13407.t1.exon1;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS CDS 1624 1774 . - 0 ID=cds.g13407.t1;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS exon 1267 1400 . - . ID=g13407.t1.exon2;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS CDS 1267 1400 . - 2 ID=cds.g13407.t1;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS exon 840 1003 . - . ID=g13407.t1.exon3;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS CDS 840 1003 . - 0 ID=cds.g13407.t1;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS exon 431 587 . - . ID=g13407.t1.exon4;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS CDS 431 587 . - 1 ID=cds.g13407.t1;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS exon 45 247 . - . ID=g13407.t1.exon5;Parent=g13407.t1 NODE_4183_length_2063_cov_33.1117 AUGUSTUS CDS 45 247 . - 0 ID=cds.g13407.t1;Parent=g13407.t1 #PROT g13407.t1 g13407 MVAVDATLSQHVPALSQLLNDPSQPLSVRFRVLFNLKNIGGHDAVDAIGKCFQDESALLKHELAYCLGQMQDPHALPILTEVLSDEKQEDMVRHEAAEALGAIAEPTVRSILEKYSQDSCTVVAETCQIALGKLDWETSEEGKKLKTDLSANPFESVDPAPPCKERSTAELRALLMDHNASLFQRYRALFALRNRNDAESTLALVDGFEDASALFRHEIAYVLGQMQNEAAVPGLIRVLERDGEHAMVRHECAEALGSIANDECLPVLK # PASA_UPDATE: g4349.t1, single gene model update, valid-1, status:[pasa:asmbl_2015,status:12], valid-1 NODE_1574_length_10398_cov_39.912 . gene 7324 10398 . + . ID=g4349;Name=g4349.t1 NODE_1574_length_10398_cov_39.912 . mRNA 7324 10398 . + . ID=g4349.t1;Parent=g4349;Name=g4349.t1 NODE_1574_length_10398_cov_39.912 . five_prime_UTR 7324 7481 . + . ID=g4349.t1.utr5p1;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . exon 7324 8133 . + . ID=g4349.t1.exon1;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . CDS 7482 8133 . + 0 ID=cds.g4349.t1;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . exon 8474 8931 . + . ID=g4349.t1.exon2;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . CDS 8474 8931 . + 2 ID=cds.g4349.t1;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . exon 9239 10398 . + . ID=g4349.t1.exon3;Parent=g4349.t1 NODE_1574_length_10398_cov_39.912 . CDS 9239 10398 . + 0 ID=cds.g4349.t1;Parent=g4349.t1;3_prime_partial=true #PROT g4349.t1 g4349 MRMTTSLLVCVLMCVLMLHHNVHAKPAAPSFNWPPKMTVGTRSDADAAALNILNSHECMHDDLPMDSTTATQDYGSNDRRRDTTSDASATWAPIRITYSAIPGSLTELTETQSKYLMETVIPTAIDRFVKTLLVIPVAGNLTLSRWCAVQYVSLPDSIPAQYRCYQYQPTSTCGPIEVPAAHYGQQYNCDYTQPGTDLSQPAKYCKPLDGGAGIPDSDLHIYVTAASSWCNSNTVANANTCVRDQMDRSISGFINICPAAYPLLDPTQSPLVFDAVISVLRHELTHVLALSSNHFPFFRDENGNPRTARGNSNYPPYDAAKGAYVVSTSTVNTFLENGKNATKIVTPGVLRAVREHFDCDSLNGAELEDGGGGGTAGSHWEQRIFYTEYMQGTIAGREISPITYALFEDSGWYRVSETCVADKLTFGYKRGCAFATAPCGGSSDPLTFCSWSTESGCSPDQLLAGTCHDGCTADGLYLSLCTTPGLTDSCKIYIGYSNGDCRDASNTATQGWYAADFRGALLGTGSRCMYSTLLSSIYAPQTDPYPACYKTECILNGTSPTLTVIVDGNRYDCAREGQAITVPGYSGSIRCPNVRTLCPTFECLTDGTLAQAVQSARAQASSAAQSESARAAAIIESTSALAASYADVSARGVATSIADVTVSVAQVSASVRSAASVATSAAAVTVSAAEFAASAKAVATSIADVTASVARVSASVRSAASVATSAAAVTASVAQVSASVRSAASVATSAAAVTVS # ORIGINAL: g4347.t1 original gene structure, not modified by PASA NODE_1574_length_10398_cov_39.912 AUGUSTUS gene 108 3449 . - . ID=g4347;Name=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS mRNA 108 3449 . - . ID=g4347.t1;Parent=g4347;Name=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 3413 3449 . - . ID=g4347.t1.exon1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 3413 3449 . - 0 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 3065 3274 . - . ID=g4347.t1.exon2;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 3065 3274 . - 2 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 2718 2810 . - . ID=g4347.t1.exon3;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 2718 2810 . - 2 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 2423 2543 . - . ID=g4347.t1.exon4;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 2423 2543 . - 2 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 2245 2299 . - . ID=g4347.t1.exon5;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 2245 2299 . - 1 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 1769 1895 . - . ID=g4347.t1.exon6;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 1769 1895 . - 0 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 1383 1477 . - . ID=g4347.t1.exon7;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 1383 1477 . - 2 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 987 1102 . - . ID=g4347.t1.exon8;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 987 1102 . - 0 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 526 558 . - . ID=g4347.t1.exon9;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 526 558 . - 1 ID=cds.g4347.t1;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 108 249 . - . ID=g4347.t1.exon10;Parent=g4347.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 108 249 . - 1 ID=cds.g4347.t1;Parent=g4347.t1 #PROT g4347.t1 g4347 MDRKRKAPASPEDVLQSYADECASYYVSHFAHLSTARGKKKAAVTSEHSVDTVMSRVRQLRKADASKEKRVVTLQDLNLAHISREVAEMGDDSVAASIEDIILRVAQSILSGHGFSYEVPSRASSNQLYVPEVDRIVLKDGVTSRPFAGTATVRKAAITTRVLQLVHEVVQKGIHITKRDLFYTDVKLFQKQSESDTILDDVACMVGCTRTSLNVVASEKGVVIGRISFRDDGDFIDCTKMGVGGKAIPSLIDRVTDIAGDAEFVLLVEKDAAFMRLSEDRFYNQQKGNPTYPLDCDPYGLKILSVYMSGSKNMSYDSAHLTTGDIKWLGVRPSDLDTYNIPK # ORIGINAL: g4348.t1 original gene structure, not modified by PASA NODE_1574_length_10398_cov_39.912 AUGUSTUS gene 4362 6702 . + . ID=g4348;Name=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS mRNA 4362 6702 . + . ID=g4348.t1;Parent=g4348;Name=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 4362 4731 . + . ID=g4348.t1.exon1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 4362 4731 . + 0 ID=cds.g4348.t1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 5095 5191 . + . ID=g4348.t1.exon2;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 5095 5191 . + 2 ID=cds.g4348.t1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 5494 5661 . + . ID=g4348.t1.exon3;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 5494 5661 . + 1 ID=cds.g4348.t1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 5823 6060 . + . ID=g4348.t1.exon4;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 5823 6060 . + 1 ID=cds.g4348.t1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 6336 6457 . + . ID=g4348.t1.exon5;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 6336 6457 . + 0 ID=cds.g4348.t1;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS exon 6633 6702 . + . ID=g4348.t1.exon6;Parent=g4348.t1 NODE_1574_length_10398_cov_39.912 AUGUSTUS CDS 6633 6702 . + 1 ID=cds.g4348.t1;Parent=g4348.t1 #PROT g4348.t1 g4348 MKPQQQQSRGYGPRKKTAPKTAAPDIRSTGPRFVKSPKRSGAEENNLARNMRPSVGDGKPFPRSSSVRRGSEKRDMSDGEDDFPAEVPRAHVTVDEAAMLKKMIVYQDSQVLVLNKPPGLVVQGMSKQTTKSLDGMLHALQFKAAEPPRIVHRLDRDTSGLLVLARTLESARILSTYFKKGLIDKTYLAITIGVPMPRAGKISVPLETTTFGTVIRPELACVSNPIYRQLKGRAVNATTTYETLSDADSAAALVRFRPQTGRKHQIRVHASGFLNTPLLGDLKYGIGCSSRLKEFLEIPEWEVRNLSLFLHAHEIELPSLCPNTSRKSPSFVINAPIPPHFKAMAGRLGLSIPS* # ORIGINAL: g2975.t1 original gene structure, not modified by PASA NODE_5287_length_926_cov_44.7474_potentialcontaminant AUGUSTUS gene 56 926 . + . ID=g2975;Name=g2975.t1 NODE_5287_length_926_cov_44.7474_potentialcontaminant AUGUSTUS mRNA 56 926 . + . ID=g2975.t1;Parent=g2975;Name=g2975.t1 NODE_5287_length_926_cov_44.7474_potentialcontaminant AUGUSTUS exon 56 926 . + . ID=g2975.t1.exon1;Parent=g2975.t1 NODE_5287_length_926_cov_44.7474_potentialcontaminant AUGUSTUS CDS 56 926 . + 2 ID=cds.g2975.t1;Parent=g2975.t1 #PROT g2975.t1 g2975 IAVGRFASLCSGGCATRIIVRDNSTNARVDDSALGDDTLVVNGGASLFDPMVIPAIDRIIGTSGSGASDATSFLLELTKASVTLPKLPYTSFLAGVSDAVQGVEIEIVAMPIDSASSVNDDAVSPPSQRFANVAKAYVLMSAAVRLASASASPWTLPPIPVSLSNLGAVLRMRRPSVDATNDMWQFSGLIKATATLASASVSALVPFPQLDWVEIVIPGRSLSLSAVISALGAAVDTSISPLFNHTTGSGVGQFPDVKLLQAGLIRIPLKSSMMPGMNRGAKFSVALSA # ORIGINAL: g3141.t1 original gene structure, not modified by PASA NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS gene 300 2791 . - . ID=g3141;Name=g3141.t1 NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS mRNA 300 2791 . - . ID=g3141.t1;Parent=g3141;Name=g3141.t1 NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS exon 1870 2791 . - . ID=g3141.t1.exon1;Parent=g3141.t1 NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS CDS 1870 2791 . - 0 ID=cds.g3141.t1;Parent=g3141.t1 NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS exon 300 1237 . - . ID=g3141.t1.exon2;Parent=g3141.t1 NODE_3770_length_2791_cov_22.6303_potentialcontaminant AUGUSTUS CDS 300 1237 . - 2 ID=cds.g3141.t1;Parent=g3141.t1 #PROT g3141.t1 g3141 VHPSTNKTYCTSALFDVDGSLLGTYRKRYPTCGGTITSPGDECGRVFVSTLGRIGVAICYDAEHDDIMDSLIAQKADVILNPVAILRPSSSGAIGGAQSAQRTALGIVARAFEWRMTEAGCTLIRCDNPSSAGYLGSTICIGAVHTAYAPSPNVCALVCECSDFDAFPAATQRPARERTERRDNSGNHTVAATVIDHGASITSISFVGRVHIRVNDARGSVSTWNVVTRTTDHVPSAVSGSASSNGGSVPLHPSLSSSCEGRLSLAVSKKVAIERSCEDSRVVAVRVGNESMRLQGHLGHVTAIATESAHAEYPWRDDGAAAALLSILRADNPETTLGVSAVALPSPFDRLHIHGLLGVGRTCEAYAVSTKSNTDRLVLKVYRGENAAEYAAREVAVLHRLSQAIKDAAENHGLLDNIPSLESISIEKTDCNRIYAKLLPTMPVPSDLVPDSELPRRQLRSAAGKDTYAPRLSCNTVKPLAQHVALTNITWEALHLIKQLLAVAHSAGIWHLDICDVNILLVDGKKVFVLNDWSTAATLADRGPVLFHRSFASNNMLTANALCADDDLVAFGHLWNIITLAKEKDALYGKWCRLQLDGKVDDFKMFWDRTEQRCREIEK* # PASA_UPDATE: g121.t1, single gene model update, valid-1, status:[pasa:asmbl_4028,status:12], valid-1 NODE_2315_length_6756_cov_41.1332 . gene 6213 6628 . - . ID=g121;Name=g121.t1 NODE_2315_length_6756_cov_41.1332 . mRNA 6213 6628 . - . ID=g121.t1;Parent=g121;Name=g121.t1 NODE_2315_length_6756_cov_41.1332 . exon 6213 6628 . - . ID=g121.t1.exon1;Parent=g121.t1 NODE_2315_length_6756_cov_41.1332 . CDS 6416 6628 . - 0 ID=cds.g121.t1;Parent=g121.t1 NODE_2315_length_6756_cov_41.1332 . three_prime_UTR 6213 6415 . - . ID=g121.t1.utr3p1;Parent=g121.t1 #PROT g121.t1 g121 MYSADPPLCLSASSQTFALSVKPEDDWGKKKSAPADVSNAAPKAVEADERDKMVDDALNEISDVPVVMDD* # PASA_UPDATE: g119.t1, single gene model update, valid-1, status:[pasa:asmbl_4027,status:12], valid-1 NODE_2315_length_6756_cov_41.1332 . gene 315 1743 . + . ID=g119;Name=g119.t1 NODE_2315_length_6756_cov_41.1332 . mRNA 315 1743 . + . ID=g119.t1;Parent=g119;Name=g119.t1 NODE_2315_length_6756_cov_41.1332 . five_prime_UTR 315 316 . + . ID=g119.t1.utr5p1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . exon 315 391 . + . ID=g119.t1.exon1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . CDS 317 391 . + 0 ID=cds.g119.t1;Parent=g119.t1;5_prime_partial=true NODE_2315_length_6756_cov_41.1332 . exon 530 607 . + . ID=g119.t1.exon2;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . CDS 530 607 . + 0 ID=cds.g119.t1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . exon 768 899 . + . ID=g119.t1.exon3;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . CDS 768 899 . + 0 ID=cds.g119.t1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . exon 1205 1342 . + . ID=g119.t1.exon4;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . CDS 1205 1342 . + 0 ID=cds.g119.t1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . exon 1479 1743 . + . ID=g119.t1.exon5;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . CDS 1479 1571 . + 0 ID=cds.g119.t1;Parent=g119.t1 NODE_2315_length_6756_cov_41.1332 . three_prime_UTR 1572 1743 . + . ID=g119.t1.utr3p1;Parent=g119.t1 #PROT g119.t1 g119 TGHVDLLEEARKLGDFVIVGLHTDQEVNRYKGNNNPIMNLHERVLSVLACKYVDEVVIGAPYAVTKELIEHFKINVVVHGSTKVVPDAEGQDPYKLPRELGILHFVKTGNSLTTEEIVERIIKNRLLYEARQRKKEAKKLEEMAVISQIKVGADTPGDTPSQSPPGSPKKA* # ORIGINAL: g120.t1 original gene structure, not modified by PASA NODE_2315_length_6756_cov_41.1332 AUGUSTUS gene 1755 5807 . - . ID=g120;Name=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS mRNA 1755 5807 . - . ID=g120.t1;Parent=g120;Name=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 5646 5807 . - . ID=g120.t1.exon1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 5646 5807 . - 0 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 3920 5500 . - . ID=g120.t1.exon2;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 3920 5500 . - 0 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 3548 3768 . - . ID=g120.t1.exon3;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 3548 3768 . - 0 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 3325 3412 . - . ID=g120.t1.exon4;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 3325 3412 . - 1 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 3090 3218 . - . ID=g120.t1.exon5;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 3090 3218 . - 0 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 2759 2834 . - . ID=g120.t1.exon6;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 2759 2834 . - 0 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 2532 2657 . - . ID=g120.t1.exon7;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 2532 2657 . - 2 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 2084 2371 . - . ID=g120.t1.exon8;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 2084 2371 . - 2 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 1886 1932 . - . ID=g120.t1.exon9;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 1886 1932 . - 2 ID=cds.g120.t1;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS exon 1755 1784 . - . ID=g120.t1.exon10;Parent=g120.t1 NODE_2315_length_6756_cov_41.1332 AUGUSTUS CDS 1755 1784 . - 0 ID=cds.g120.t1;Parent=g120.t1 #PROT g120.t1 g120 MAATPVGGGTLLFLNDPLVAPDDIGARWSADFKTVEGAVAHLSELEGNKVLFAKVSESTEMHDVVVTGLVYGALATADTTAHIHRLGFVVRDQYAHACKLLRILVRDHFHRICEQPRKQLIGLLGALVDARAGDAQGVFAELLRRVAGGDVSPANVWLAQSALELLSRNERWLDANLSFLSLCVYTYICLVPSHMSGALDALREAECAFVVGALRRQWTACCVIGRDLLRALIEVARIPPFAQLWKDILHRPSNLADGFTGVVDLLRRPTPARYLAARIPVAMEAHLLFMLSSVHRGSERRHQGWFAERFLSTPESEGAIVDIVRYACVVHHPPNDVLASPVIQRWMLLGWLLRQVRTNATAASVKLALFLDWFAYDPKRDSVMLIEPALLLMCHSLPKYVSLSVNLLEFVTVMAAELYPPAASDIRASVSRAFRNAVDVGVIPALSMVTRHPAFPPTAASAFYATFPELLVEKQRGTGAVTGEPESQPHVPSQPSVKVHSAPPLTAHASSPLPHRVAGENDGEDMQTTPTVPAHSADTARGLAAMDVASLVASMAAITVTTPNPAPRMAAVVAALAIAFQQSESSSDSDIASTAALMCETVFSRSNAEDALFALFLEATVPEGSPPATWAFGIVVRTCMILRAKRVAVLLYAAKGEGLRRSIYARMLDALSVDLSAGLLDDLRTLVDMDVGRFYESLPSVYALHSDALLGNADVIAVIVSRMDAEQLFKLKLHAMSGSMTIVGPRSAECVIASLAWETLEQLFVWQLLSAECRGDYDYLGGVVTSIFHNINPAVHHEALSGVLSLLAEVCPTAAAVRDLSLATSARPDVSSVAECVFAAWIVRDVRMLCDSVETFIAENSGREAAFLRRVVRRAAGLPIVARHPSAFSAARELFHGMPVDEDGAEPLHKRQRTD* # ORIGINAL: g14362.t1 original gene structure, not modified by PASA NODE_1335_length_11993_cov_53.2867 AUGUSTUS gene 1761 3830 . + . ID=g14362;Name=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS mRNA 1761 3830 . + . ID=g14362.t1;Parent=g14362;Name=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 1761 1804 . + . ID=g14362.t1.exon1;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 1761 1804 . + 0 ID=cds.g14362.t1;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 2170 2431 . + . ID=g14362.t1.exon2;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 2170 2431 . + 1 ID=cds.g14362.t1;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 2657 2719 . + . ID=g14362.t1.exon3;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 2657 2719 . + 0 ID=cds.g14362.t1;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 3081 3353 . + . ID=g14362.t1.exon4;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 3081 3353 . + 0 ID=cds.g14362.t1;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 3633 3830 . + . ID=g14362.t1.exon5;Parent=g14362.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 3633 3830 . + 0 ID=cds.g14362.t1;Parent=g14362.t1 #PROT g14362.t1 g14362 MDEGKALGLIRLLSKQIDDELQADSKESYTRDDLLVILRDNMRSTVNLVNSFFDGEIEREDGALPRGSTELDEKFENKPFEDIRDELLTRIIAAASSQAAAEEKAAATAAALSVAQAEVARVSTSTSSPAPKEKKKADKSEQSVRLASVAQKDAQRKDGASASASASARPKSMFGEVPIEKEGTMVKRGGRVKSWKKRYFRLAGTDLKYWAASDDKDPLGCLSLLDCIGISTVDNDKYGRNNCFEIMMPGRDYVFCAESSQERIEWMNAIRDVMPTFLN* # ORIGINAL: g14361.t1 original gene structure, not modified by PASA NODE_1335_length_11993_cov_53.2867 AUGUSTUS gene 244 863 . - . ID=g14361;Name=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS mRNA 244 863 . - . ID=g14361.t1;Parent=g14361;Name=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 804 863 . - . ID=g14361.t1.exon1;Parent=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 804 863 . - 0 ID=cds.g14361.t1;Parent=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 610 667 . - . ID=g14361.t1.exon2;Parent=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 610 667 . - 0 ID=cds.g14361.t1;Parent=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 244 392 . - . ID=g14361.t1.exon3;Parent=g14361.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 244 392 . - 2 ID=cds.g14361.t1;Parent=g14361.t1 #PROT g14361.t1 g14361 MQPLNPEQFDNLFTFRRSSVPHIVSNHPQEDDDYPNGEEDYDLENLSDGDWDESAFDWDQEDDLSAFYDDSNEGDAEEKRDVDIRGVY* # ORIGINAL: g14363.t1 original gene structure, not modified by PASA NODE_1335_length_11993_cov_53.2867 AUGUSTUS gene 4409 9487 . - . ID=g14363;Name=g14363.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS mRNA 4409 9487 . - . ID=g14363.t1;Parent=g14363;Name=g14363.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 8966 9487 . - . ID=g14363.t1.exon1;Parent=g14363.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 8966 9487 . - 0 ID=cds.g14363.t1;Parent=g14363.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 4409 8857 . - . ID=g14363.t1.exon2;Parent=g14363.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 4409 8857 . - 0 ID=cds.g14363.t1;Parent=g14363.t1 #PROT g14363.t1 g14363 MLGDTDMTDSHGALANEPCIVCFSDGADVPEGEGCFSRLSVDLARMYGVDAFYEGLHVCKRHSQRPAVEYKRNIVVTVTSEPSDPASVSASASALEKPKVTDVAPAFPRRQLDFGSPKQPDSAANAHANSRSQRPRKEAHSGAVQTIASKISELDSALENGDISERECLRMKKELLLPHMTYEWAQKVAQLDASLALGQLQFRAYAVAAQEVFTSAVGAIVCSTETTQHNAQSADAATNERKRPSEVLRTNAAVEAEESDVPKKRSRSESVAHSSEGVAKYRASDDVDMVESSADGDGCVDMAESAPNAVGDDDDKQDVKIVEDFVVGGRALRGNRPRMADVVGKRDGRSTRAAANNAVAKVPRVPKKCAECKQLLADGSIRLFPGMGQDALRDEEIALTDPRLQFDGACNGEDITEKPVLRLAEYAIFDSKGHLVPIDKGLIESGVRLYVSGYIKFPTDDTPGPAHGVPIDAMGPLTEWYILGFDGGANAILGISTPCAEYLLINPHASYAPVIDQLRDKMYLSKIVIEFAENNPEAAFEDLIGKVQTSAAPNCPVFTDDALVKHAQFVVDRVVSYDECCDADGIQLVTTPCIRRLIEFGNVTLGIRRQWLRGGDRGLRRERATKKKIDTMATTTPLVRRVFDAFFHAQIDGKDAMGRARKNRCGVCEVCQSPDCGECDNCSDMPKFGGTGIKKQACKRRKCPNMAIREAEDDERAEDGEEDEHPADADDATDGHRATAHRTELKSSKLSWVGLPLEKDGGKTYYSAATIDNMAVEIGSFVSLLPSDPTKPLWIGQVVSLFQSESGDSKFHCRWLRRGCDTVLGETAHENELFLEDACDENPLDAIMGVVSVQFVLPGAAWAQEGGTEAAALVREQEGADGRDGKMFYCHKMYDPRSGRFVDIAPEALVPCDRTTGVPINSASCWACSMRCRRVGFESRVLIDAFDADGKPTYGFRYRGVEYRAGDFAYVAVDAVKGYADRYERARAAKADARTGGVADNRHRDEDVYPELYRKRSQAIKGSNERAPQPYIIGRIQKVSGGARKGDEPHVTLQRMFRSDETPFEAMSGFGVRELYWGDEVIVVPLSSVGTKCAVGHVDDVPGTLEQFLGEDHRFVFRHAYTEGAKLPTSPLQSSRDGSGLRCMYENGGAVGAGGKGKGAPGKGKASESSGLASAAAPIRPLRTLDIFAGCGGLSEGLHQSGACASDWAIEFEDVAAQAYRLNNPDTTVFSDDCNLLLRLIMDGQRMDPKGQRLPEKGDVECLVGGPPCQGYSGMNRFNHGDYSKFKNSLVVTYLSYLDFYRPKFFLLENVRNFVSFKNSVVVKLVLRSLLDMDYQCGFGVLQAGEYGVAQTRRRAFIWAAAPGEALPNYPDATHAFPSTGSSNTVVINNERYYFRRAVPLGAPMPPVTVKDALSDLPPIENGAAVDEISYVSEPQSDFQRRVRSARGGQTVLYDHICKAMGAIAHARICHIPIAPGSDWRDLPNKELVLSDGTVAPKLVYTHNDKRQGKTSKGGLRGVCICAETGKCDSDDRWKQVNTLIPWCLPHTGSRHNEWSGLYGRLEWDGHFSTTVTNPEPMGKQGRVLHPEQNRVVSVRECARSQGFPDHFRFYGSVVEKHRQVGNAVPPPLARALGVELKKAMLSRRTNSGASVDFRR* # ORIGINAL: g14364.t1 original gene structure, not modified by PASA NODE_1335_length_11993_cov_53.2867 AUGUSTUS gene 10123 11734 . + . ID=g14364;Name=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS mRNA 10123 11734 . + . ID=g14364.t1;Parent=g14364;Name=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 10123 10257 . + . ID=g14364.t1.exon1;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 10123 10257 . + 0 ID=cds.g14364.t1;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 10433 10546 . + . ID=g14364.t1.exon2;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 10433 10546 . + 0 ID=cds.g14364.t1;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 10937 11074 . + . ID=g14364.t1.exon3;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 10937 11074 . + 0 ID=cds.g14364.t1;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 11320 11491 . + . ID=g14364.t1.exon4;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 11320 11491 . + 0 ID=cds.g14364.t1;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS exon 11589 11734 . + . ID=g14364.t1.exon5;Parent=g14364.t1 NODE_1335_length_11993_cov_53.2867 AUGUSTUS CDS 11589 11734 . + 2 ID=cds.g14364.t1;Parent=g14364.t1 #PROT g14364.t1 g14364 MDRLAGIIASEVASSSIVSSSLLAQAEALAQCDDVEAEDGRRQLIRYWRDFVVVGATADVARRLVPFLSLEQLTSFIASTGFKLEETILTLLESLADRASAKPANAVSRILPLCSPALVLLPALLKHSMEVVGVANGLPTDISSAQVARISVVFQRAINLLKTLLTALCDASDATNPGDDSVAIGHVCEKLLPICLLFDEDLSLMNITWKSFVKIVTKHGAAMEAGNNVSVFCP* # PASA_UPDATE: g13183.t1, single gene model update, valid-1, status:[pasa:asmbl_5310,status:3], valid-1 NODE_295_length_27818_cov_42.2566 . gene 1523 3813 . + . ID=g13183;Name=g13183.t1 NODE_295_length_27818_cov_42.2566 . mRNA 1523 3813 . + . ID=g13183.t1;Parent=g13183;Name=g13183.t1 NODE_295_length_27818_cov_42.2566 . five_prime_UTR 1523 1642 . + . ID=g13183.t1.utr5p1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 1523 1810 . + . ID=g13183.t1.exon1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 1643 1810 . + 0 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 2105 2233 . + . ID=g13183.t1.exon2;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 2105 2233 . + 0 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 2399 2535 . + . ID=g13183.t1.exon3;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 2399 2535 . + 0 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 2663 2734 . + . ID=g13183.t1.exon4;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 2663 2734 . + 1 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 2880 3004 . + . ID=g13183.t1.exon5;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 2880 3004 . + 1 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 3114 3214 . + . ID=g13183.t1.exon6;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 3114 3214 . + 2 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . exon 3387 3813 . + . ID=g13183.t1.exon7;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . CDS 3387 3773 . + 0 ID=cds.g13183.t1;Parent=g13183.t1 NODE_295_length_27818_cov_42.2566 . three_prime_UTR 3774 3813 . + . ID=g13183.t1.utr3p1;Parent=g13183.t1 #PROT g13183.t1 g13183 MAGAYEYLQPMHEIFTPADVKSFLASEACDSLVAFVTRLGDSVIGKKITDAIVVSPTVQGMIDTLSCMDEYIKDIPPITDHKSRFGNPAFRTWLTKVQDTIDDHLRKLVPEEAIIEFRTYFTTCFGDFQRIDYGTGHELHFCVWMYCFEKIGKIGAEDYPALVLRVFNRYLKLMRNLQLTYWLEPAGSHGVWGLDDYHFLPFLFGAAQLVDHSHMRPKSIHNEETVAGFGNQYMYLGCIQFINQVKTGTLPWHSPLLNDISGAKTWRKVYDGMIKMYKAEVLSKRPIVQHLLFGSLFHFESDAVDGDDAEAGEDPCGQGHAHGGHGHGQAGLPKGSGGAIMTDVMPPCCAPRVPSAMSAMDSKQRKNMIPFD* # PASA_UPDATE: g13182.t1, single gene model update, valid-1, status:[pasa:asmbl_5312,status:3], valid-1 NODE_295_length_27818_cov_42.2566 . gene 503 1356 . - . ID=g13182;Name=g13182.t1 NODE_295_length_27818_cov_42.2566 . mRNA 503 1356 . - . ID=g13182.t1;Parent=g13182;Name=g13182.t1 NODE_295_length_27818_cov_42.2566 . five_prime_UTR 1250 1356 . - . ID=g13182.t1.utr5p1;Parent=g13182.t1 NODE_295_length_27818_cov_42.2566 . exon 1141 1356 . - . ID=g13182.t1.exon1;Parent=g13182.t1 NODE_295_length_27818_cov_42.2566 . CDS 1141 1249 . - 0 ID=cds.g13182.t1;Parent=g13182.t1 NODE_295_length_27818_cov_42.2566 . exon 503 951 . - . ID=g13182.t1.exon2;Parent=g13182.t1 NODE_295_length_27818_cov_42.2566 . CDS 731 951 . - 2 ID=cds.g13182.t1;Parent=g13182.t1 NODE_295_length_27818_cov_42.2566 . three_prime_UTR 503 730 . - . ID=g13182.t1.utr3p1;Parent=g13182.t1 #PROT g13182.t1 g13182 MASDGDRYPKQVFQHQSEPFGDKLRRKFSENPFVPIGLVITAATLVIGLRAMNNNDKRTSQFMMRARVLAQGLTVGAAVVGMVYFPSSRLRNQQNPDAQSRMGDIDATK* # ORIGINAL: g13189.t1 original gene structure, not modified by PASA NODE_295_length_27818_cov_42.2566 AUGUSTUS gene 23036 24982 . - . ID=g13189;Name=g13189.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS mRNA 23036 24982 . - . ID=g13189.t1;Parent=g13189;Name=g13189.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 23036 24982 . - . ID=g13189.t1.exon1;Parent=g13189.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 23036 24982 . - 0 ID=cds.g13189.t1;Parent=g13189.t1 #PROT g13189.t1 g13189 MSLPHRGLAWLRGRLPAVSALAPVRLYSLVAAAVALLLIQLLVYGSRPYSQGVFVRSPSPLTTGLDVETVQRERLDVNAVEQSTERSINGMGVDGKIVDGTVEQEMHSAPATATVWWTADGAYRESASRDDRSSPSSNLTADTLADMKRSNSPSERFLFGVPVNGPNNQYYAVVSYLKLAMILNRTLVLPAFVDHSSHRHQGGSHWEPFAFESTFDVASLSRASCAPRLISTNSFLSTVWTADAPRLIGAMWHSHKKYEANFESDPYWSYYRDKFFRPKAPVPHIVPSRGTAARLDWTLSGIGKAFGGDRPEWELLVVNHALHNDINYYVLGATVQHVGLPFRDAHLRVVRALVHAPAIVRHATDIINAVIGSGEPFFAVHWRRADYAIPPAGCTTYLRCTDAESIDNLIDVLDSAVSAAVGAGFNNATHWPVFLSAQRFSADEASVFASRGYTKIARYPPPVTDRFEEPYYISLAEQEIGMRATGFVGSYSTWSERIIETRVANAQMRFTWHMPTALKYRPTNDSRTAGANSNGTLVGFKGSAVACGFEYMALSNEAPRRMSLACGEGKVVSRAAFASFGRPAGLCGAFVEDRGCHCPHSVAHVEKLCVGRPRCEIPVDNAAEHFAYSCNHLGGYSLAVVLECRATL* # ORIGINAL: g13185.t1 original gene structure, not modified by PASA NODE_295_length_27818_cov_42.2566 AUGUSTUS gene 8167 10856 . - . ID=g13185;Name=g13185.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS mRNA 8167 10856 . - . ID=g13185.t1;Parent=g13185;Name=g13185.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 9379 10856 . - . ID=g13185.t1.exon1;Parent=g13185.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 9379 10856 . - 0 ID=cds.g13185.t1;Parent=g13185.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 8167 9031 . - . ID=g13185.t1.exon2;Parent=g13185.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 8167 9031 . - 1 ID=cds.g13185.t1;Parent=g13185.t1 #PROT g13185.t1 g13185 MVRSWALLGDVSVHVQVRSTLGPPGQSRFAAPDALDNTAAARRVDTVSIYPSLRLLDDETTLTRSPNVSSRQAPPGVRRLSLIPADDLNRERQPTWDSADARRILFSNIAYLDDRYDPPRVNVVGAIQRSVPIRNNNNSSSSNSHNNMTATPNAKTSEFFQNLVVHCLFRRGARALLEYDAPPPQDRTEGAATEGSISTAEMSLQVVRASLEFDPAVKNTFDTLFTHVTFVASCALPAGYAEDGGVELPPYASMPASDPNDAQSQSPHEQRMYAQEFFAANVAIRLVHGVWNERDTGGASAAAPNLMMSRGALSSPYIGNAWPLDSPPNASRPLRSLWPSWAAVRVPGPEDAACLKTQTAGSSKGGGLDPEDSVPGARQQQQQQQQQQQQQQQQPKPHEFGACLSSIRGDYKKAVKIVEWIEFILAMGTTHLIMYVDVDDASDELWRTAEAYRERGVATVVEWYYPTLTRRDDSKSSGEATARNASSSFMFYHGQILVINDCLQLARQTGIRLVQFADFDEYIAPGPGTPPGQLRSWSQMVDVIERRAAQSGRPRRFHTYGFTNIIYPIMVCDDAAASRVNQGASSLPMAPSTSRSLSPQDWPSMFDRFDRRSSHAFPYGTRSKNFVRPERIHFMIIHRVHSAVVPLISASVAASLPLREFAYASFGGSTNISNAALQVVDRANSGAVLSRCFWRRVVETATHPNATMTEIYGGTVVADARLARIYHERTPWRDMTCANVAVREPINVPRDVVEAVRERVVTALAHIGLCQDLHSTSCLP* # PASA_UPDATE: g13181.t1, single gene model update, valid-1, status:[pasa:asmbl_5306,status:12], valid-1 NODE_295_length_27818_cov_42.2566 . gene 153 405 . + . ID=g13181;Name=g13181.t1 NODE_295_length_27818_cov_42.2566 . mRNA 153 405 . + . ID=g13181.t1;Parent=g13181;Name=g13181.t1 NODE_295_length_27818_cov_42.2566 . exon 153 405 . + . ID=g13181.t1.exon1;Parent=g13181.t1 NODE_295_length_27818_cov_42.2566 . CDS 153 383 . + 0 ID=cds.g13181.t1;Parent=g13181.t1;5_prime_partial=true NODE_295_length_27818_cov_42.2566 . three_prime_UTR 384 405 . + . ID=g13181.t1.utr3p1;Parent=g13181.t1 #PROT g13181.t1 g13181 DAINRLRALEDMGRITGVTDDRGKFIHVSMEELEAVAKYIRQNGRVAISDIADASNRLINLAGSTSVEAPSLVQQS* # ORIGINAL: g13186.t1 original gene structure, not modified by PASA NODE_295_length_27818_cov_42.2566 AUGUSTUS gene 11719 15606 . + . ID=g13186;Name=g13186.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS mRNA 11719 15606 . + . ID=g13186.t1;Parent=g13186;Name=g13186.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 11719 15606 . + . ID=g13186.t1.exon1;Parent=g13186.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 11719 15606 . + 0 ID=cds.g13186.t1;Parent=g13186.t1 #PROT g13186.t1 g13186 MMQPTVSRHSSGGGGGASTLTPLALAAAIAVWYVSASLSVIGSSVALNGRFGDLKWVALSLLFTVAGGIPSIYSYAREKDATRRCIVAAFRDSHLIYASGAHLVGILGMCVSFSTVAASTSQVIKASEPIFTAILWWTIRGETLSKPSLQAVVLMSTGIAVACCGGGAADALGLASSVASAVFFPLRNVLISGTNSDISPIAKYGVVSALSAAPALLLFVVCVGLYGVPMLAPGPTSLAVGFHVAYMAASFVVLGATNPITHSVANVCKRLSTIVVAHVYFSTSFKSLETIGFWILTVGFMLYIRAKSTSHHNDATTSPVLVRSATSLVDSMAVVRNKRIGVCFALCAVAAMLGMFILATPLSVSRTAVPLELGSAIRLGRARDSGTGGEYNVALLADADYRRAGLLLWPYAGAPLTQALQDSAGGGAMRVDEVERLLTEYDTVTVLCADAVACRQALQSPNSSSSTDRTKPTFKNRNPLVIVQLVATDICRDTALETWFRRHTINKLLSGVAYQSYVESALHLCGVYRYGGAVLSAFSPGPVPLACNMSAGDICVGIDTEGQLHTATLVARPRHHLVNVMIEALAGALPRYKEGMQWPAIVSPASKLALAFREACAESGFESAARSDSENSPSNALTRRPSGCLEYALLSPPPATARPTATRSFGVLSYDSRVSSERTDVNVGDEVQAIPGSQFLPFIDRFLDRGKSVLSPPPPSNSINTTIFLNAWWGSAVWPPPASVHPILVSMHVEPGMFPAFQANSSRAFFANYEKPVGARDVGTLNFLTKIGVPAYFSACATLLMASARAYGHRPSRDIIYLVDVTNSTIDLLPAWIVSIGVRVAHNLDSASGPVRRDRMLRYSKAVEYLELYRDARLVITQRIHAGLPAVGMETPVLFINSRDMPGGGGGKTPSSRVGGLTGLFHTIDLFTMSAQEARERLQSFDYRNPPSNPSPALRDRLRASLWNVVRKDRDLRAEAMFNGIVPLQRIPSKNDGDTSEGHRVGAECKIRFHFIQTTGESTWTYRQQRSVESVLYHHPDACVTVHTSTLRPSMFEKFVDAGYDVRVEPIDVELLARGTPLEGVTTQPRYAAWKLGRYWYSHYTDMLRLLILYKVGGVYLDTDVYVTRSFAGLRNTAARELVGGKVNGAVLVFDAGNPFLLDCMTEFNGTYDGLQWAANGPGLITRVWVRAWMTRPDDLKVLSPVAFYMIRFREIANVCFASTNETVIGPFADLLASGTPYAVHLNFLLTGKIPTVTPGTLCEYLLTAFCVFCDEHPHPPVSYNPRLTVVTARTSPLD* # PASA_UPDATE: g13190.t1, single gene model update, valid-1, status:[pasa:asmbl_5313,status:12], valid-1 NODE_295_length_27818_cov_42.2566 . gene 25554 26926 . - . ID=g13190;Name=g13190.t1 NODE_295_length_27818_cov_42.2566 . mRNA 25554 26926 . - . ID=g13190.t1;Parent=g13190;Name=g13190.t1 NODE_295_length_27818_cov_42.2566 . five_prime_UTR 26919 26926 . - . ID=g13190.t1.utr5p1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . exon 26739 26926 . - . ID=g13190.t1.exon1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . CDS 26739 26918 . - 0 ID=cds.g13190.t1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . exon 26576 26606 . - . ID=g13190.t1.exon2;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . CDS 26576 26606 . - 0 ID=cds.g13190.t1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . exon 26367 26476 . - . ID=g13190.t1.exon3;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . CDS 26367 26476 . - 2 ID=cds.g13190.t1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . exon 25554 26106 . - . ID=g13190.t1.exon4;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . CDS 25651 26106 . - 0 ID=cds.g13190.t1;Parent=g13190.t1 NODE_295_length_27818_cov_42.2566 . three_prime_UTR 25554 25650 . - . ID=g13190.t1.utr3p1;Parent=g13190.t1 #PROT g13190.t1 g13190 MIRSLIFGRKHYLSRAVLLPNCHTVLPCSARIPRGFSTMAPAQAGKTLIKIDVTSDNICPWCFVGKRRLEEAMKKTSDAFDFEVTWHPFFLRRDLPKEGMAIADYIEMVYGRKMDVTSPSNPLNQAGREVGINFNSTRRMVPTLDSHRLVEFARTKGKQDACIEAVFRAYFENAVDISNHDNLVGIARSIGLDEAETRTFLASGNETAAIDAKDRENKMRRISGVPHFVIRKDGAQRGVQLSGAQEPDTFVDAFEEPV* # PASA_UPDATE: g13184.t1, single gene model update, valid-1, status:[pasa:asmbl_5311,status:3], valid-1 NODE_295_length_27818_cov_42.2566 . gene 4294 8054 . + . ID=g13184;Name=g13184.t1 NODE_295_length_27818_cov_42.2566 . mRNA 4294 8054 . + . ID=g13184.t1;Parent=g13184;Name=g13184.t1 NODE_295_length_27818_cov_42.2566 . five_prime_UTR 4294 4655 . + . ID=g13184.t1.utr5p1;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . exon 4294 5705 . + . ID=g13184.t1.exon1;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . CDS 4656 5705 . + 0 ID=cds.g13184.t1;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . exon 5979 6458 . + . ID=g13184.t1.exon2;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . CDS 5979 6458 . + 0 ID=cds.g13184.t1;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . exon 6730 8054 . + . ID=g13184.t1.exon3;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . CDS 6730 7668 . + 0 ID=cds.g13184.t1;Parent=g13184.t1 NODE_295_length_27818_cov_42.2566 . three_prime_UTR 7669 8054 . + . ID=g13184.t1.utr3p1;Parent=g13184.t1 #PROT g13184.t1 g13184 MSDDPESQTMDTGGGAGSGANSASSPVRDAPALESEGAHVHFRRDTTESIVLPNAVHDTNSHGALGSGSYASVIASGINHSTESTHALKRAASSGSILNMPITSKKMGRSSLLEMNKERRAIQHKLKSNPRTGGGSALAKQMVALLSRTRNTRGSVMEIKPQDQPAAAVSGQRRMNISSSRFHKTTGTVFLEPKKGTGASIRKVVRHNAFLALMYVAMLWSIFAPFARILGPSTLRLPFFAVTMGVFAFVTVELVLNLALEIHGPRISQRNALDFFVVVSFIADAVEYNKWPNGETRSFFLVALILVRSYRLCHIALPIYTHMLEVVRSVLMKWHEETPGALRLDNPLQGTYKVIVRRLTMKLYSTAVFTALSCAVAASMLEESTFLSSVDYSAAASGLSEVATLALAGGIGGNQTVAVFKSLYPNLLTLSIPGVSNYSRNVADPLDGLDSRTVVRVYGLHNTMATFDDSDAHDAYARSCLAFAGCAIGALFLACVIFRAAAGQITNLLQMACGLAGSTMVTESLFTNNQQAAMMLGTKVNGVFGFCDIRQFTDATEILKEDVMMFVNKISTIVHTSVSEYGGHPNKNVGDAFLTVWKFGDLNAHRSMRRMADGALLAVLQVWDGISMSETLSYLSNRIHKVIPTYSVRLGFGLHVGWAIEGAIGSLFKFDASYLSPHVNLSARLEGATKQYGVDILISGQFYSLLSPDLQELCVKVDHVTLKGSKSPIYLYTLNAHLVAEGQRMGMCVIDTPPGETSKLARYSQDAAVEEYIKGDWVRAKELLVLADSLKTPYGRVLNSFMEANNFVPPKDWKGYRELLDK* # ORIGINAL: g13187.t1 original gene structure, not modified by PASA NODE_295_length_27818_cov_42.2566 AUGUSTUS gene 15913 17616 . - . ID=g13187;Name=g13187.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS mRNA 15913 17616 . - . ID=g13187.t1;Parent=g13187;Name=g13187.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 15913 17616 . - . ID=g13187.t1.exon1;Parent=g13187.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 15913 17616 . - 0 ID=cds.g13187.t1;Parent=g13187.t1 #PROT g13187.t1 g13187 MDTSIALPAMPSPLLVSVLESPTMPRRDIDRVGAVEKFVVSSTDDAVAARTADSQLSPADSEDSVGALYSAETHMQSPRIGGEGNVLPSRRYLIPVHNLFQDGPNNQYYNFVETVKFARALNRTIVTMPFVDHAMHRTRNGDMPLKPFNLTFNEDHLQKSGVLLEGGLSSVAEVRAFLASLSTGPVIDVCWIFRPSGRIYSIAKSVVGAQQNCASLVAVRPSFVSAAAIRGALGEQHLNAPVVLMDHLFLQDDMYRVNRRSLVHRATQYRDEHLLVMRAMVPHADVLHNATRFIQSAFAGKPFVSVHWRRADRTVQNCTTYMVCTDAVNITELLDVIDSACHAARSAGSLPHSTSPLIYLAVLRISEEDLSLFGSRGYTQVVRYEPSVDEDPYCVSLVEQEICHRGVAFVGSLDSTWSCWVIETRIVRGVRLSWSTGQLTSDGRAGVRYERPPVSASFYNSTVCGYEYMGISTEPPVVMSLKCPPGHHISDVIFASFGAPGGVCHRFHVDPLCHDKESAKIVAGLCVGRAECELPVTSAEGAGGFGLRWCKTGGFALAVTLACTAGV* # ORIGINAL: g13188.t1 original gene structure, not modified by PASA NODE_295_length_27818_cov_42.2566 AUGUSTUS gene 18981 22154 . - . ID=g13188;Name=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS mRNA 18981 22154 . - . ID=g13188.t1;Parent=g13188;Name=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 22097 22154 . - . ID=g13188.t1.exon1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 22097 22154 . - 0 ID=cds.g13188.t1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 21767 22003 . - . ID=g13188.t1.exon2;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 21767 22003 . - 2 ID=cds.g13188.t1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 20493 21672 . - . ID=g13188.t1.exon3;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 20493 21672 . - 2 ID=cds.g13188.t1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 20049 20331 . - . ID=g13188.t1.exon4;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 20049 20331 . - 1 ID=cds.g13188.t1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 19813 19924 . - . ID=g13188.t1.exon5;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 19813 19924 . - 0 ID=cds.g13188.t1;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS exon 18981 19669 . - . ID=g13188.t1.exon6;Parent=g13188.t1 NODE_295_length_27818_cov_42.2566 AUGUSTUS CDS 18981 19669 . - 2 ID=cds.g13188.t1;Parent=g13188.t1 #PROT g13188.t1 g13188 MAPTLATGMLLLLLCAAASTVVSSPVPKTPFDCCEQGDEYRDPWHNCRHGNSFKDDGKNLNWLNMGYSAEGAFVRHVTCCQSHYATPSANREFPFQCAVPPTTVPLGGFGCDAEHPCSSNNAVCHNFSLHESPETRPRCVCASLDDPLGPTGACVWPSGQVPSPKRVFRWMELDIYHTGVACKSGKARDTAEFLVAECQPHKCHCASIDDPNFVLETDEPCTCWKSGEVPNGYRVQDETFWGLTWSNDKCKSTVGIPDSRGAHDRCSCPSPDDPGLNTSSCAWITEVPYGKRVWPILLDIKSSDGAQLCRTGAGVVSADANWFGTCTCASPDDPMDNPDRNVTCRWTERRSVPNGKRVRASMSDFCHSMVTYPTDSDEYVLCSCPSREDEAMVAGSETECVWKAGMVPPKYHTMHRDYCFFKSDNVAAGPNGTIVCPGPHYSADGPEAIMAQIRGIKSSWDSGVWAFKTPAQRDCYVAVSKKLTQEQEEDIRSRYGHDGIQSGIASSWKASLSSDYFRKNVRGRAPNCDAVCFDFVFGVLEEEFGTLSVVSQLYAITKVSLDVYDRTLQSNVDVAKELVKMEEHIKVKPQSGFANFMIRLIANVMKAAAKTFFKTNLAAKFGLTVAAGLVLELQSTEKPENYDPNASLEVAAAGLKSELNMRYLKLLQAYSELFTKLVDSPLKMRMAATISQQFNATTEADIADQVMQQAPDIRGGLVRILFPAKWMICYSQTAKFSTSECCSFYNHPCQGSPNNPNFNARIPGDRLFGLTDIVIPDERYGSQTFGWVCPNGRWASGTLAKTETYIAAGAAPDAVHQFESDLVRSVAADNQQWLADNGWSTFSKQGPCPSDD* # PASA_UPDATE: g6420.t1, single gene model update, valid-1, status:[pasa:asmbl_7021,status:12], valid-1 NODE_4146_length_2122_cov_49.383 . gene 322 2094 . + . ID=g6420;Name=g6420.t1 NODE_4146_length_2122_cov_49.383 . mRNA 322 2094 . + . ID=g6420.t1;Parent=g6420;Name=g6420.t1 NODE_4146_length_2122_cov_49.383 . five_prime_UTR 322 398 . + . ID=g6420.t1.utr5p1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . exon 322 428 . + . ID=g6420.t1.exon1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . CDS 399 428 . + 0 ID=cds.g6420.t1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . exon 806 933 . + . ID=g6420.t1.exon2;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . CDS 806 933 . + 0 ID=cds.g6420.t1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . exon 1406 1475 . + . ID=g6420.t1.exon3;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . CDS 1406 1475 . + 1 ID=cds.g6420.t1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . exon 1921 2094 . + . ID=g6420.t1.exon4;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . CDS 1921 2091 . + 0 ID=cds.g6420.t1;Parent=g6420.t1 NODE_4146_length_2122_cov_49.383 . three_prime_UTR 2092 2094 . + . ID=g6420.t1.utr3p1;Parent=g6420.t1 #PROT g6420.t1 g6420 MTTPALEPLPAAVRRAVQESSIFAKGLAGALVAGYLIGKSDFGHGMLALTPAYVSPPSFMVWTLVTAGLLESSLLGLILDCIAVFGVARFVEPLWGMREFARFVFVVNLFVNSATFFLSIALYFIANREDAV* # ORIGINAL: g10528.t1 original gene structure, not modified by PASA NODE_623_length_20040_cov_42.8658 AUGUSTUS gene 12965 15684 . + . ID=g10528;Name=g10528.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS mRNA 12965 15684 . + . ID=g10528.t1;Parent=g10528;Name=g10528.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 12965 13082 . + . ID=g10528.t1.exon1;Parent=g10528.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 12965 13082 . + 0 ID=cds.g10528.t1;Parent=g10528.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 13193 15684 . + . ID=g10528.t1.exon2;Parent=g10528.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 13193 15684 . + 2 ID=cds.g10528.t1;Parent=g10528.t1 #PROT g10528.t1 g10528 MQLRRPSQSQHDDPIIACLEAWVTENGGNFRGFTVDNNLEYGRGVRATVDFSAGDRLAFLPHKCVLRLHNAIDSAVGKAILDCHSVPKPVDAKSIFYAFLIHERFVATAGDGSFWRAFALSLPSVYSDVLWFNDVDRQALVATNLGSSCDERRAILRAKYDALFPALSEYSPQMFPPEKFTWENFLWAYSSHQSRCFPERIFLHRGQRPSVAVYEASLVSDADNVGCMLPLLDMGNHRQRTRITWMSDDEGVTFQTDAAIASGEEVFNSYGGKSNEELLTGYGFCVEDNPLDFVPIKVRVSGDDPLAADKAALVAAARLPDVHNIRRGVPIPPSLFAALRACVIDEEDLYFALSRASSANAASTECVEDGSRGHEHPLLTQLSPHNEVQMLLSLQSMLRAKYESIRDTNPPPNAVSLGPDAQSRERLCASLLYRQGQLTVLEEASAQLSDAIARTVAECVLPSSPLSTVTGAGGCVTPLPSAHAGQVDMLEAKALKTCARWMTTNGGSVKFDPVTAATPTPIVGLERPLFRSEAEEGAWAAASFTTESASVVLVSPIDCVFSAEDACTDETFGEALGAISEGLEPEVLLILAAVRDRSAGASSRHAHLFASIPAVVGSLLVAAAEGHLDDLLPNSLVALTPARQSVMDRTEDVMSIYNDLFPQLSAELPAAFPGHVYTASNFLWAAAAVECASVDLELETEENEGSYSCLVPMLAALPRSPFPSLHSSVDPHSGLVVLASRCAVATGACVHSGPLDGCVKHPRLLSSYSAVYSVPESAYNSSEAVAVARDHVTGKLLYVRPADPRPAQLVAHCGGTEHVAALLALRITELDAHMKSLNTATSAKILTLRYCEHIAGVLRECAARLASIA* # ORIGINAL: g10525.t1 original gene structure, not modified by PASA NODE_623_length_20040_cov_42.8658 AUGUSTUS gene 3428 5041 . - . ID=g10525;Name=g10525.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS mRNA 3428 5041 . - . ID=g10525.t1;Parent=g10525;Name=g10525.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 4442 5041 . - . ID=g10525.t1.exon1;Parent=g10525.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 4442 5041 . - 0 ID=cds.g10525.t1;Parent=g10525.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 3428 4267 . - . ID=g10525.t1.exon2;Parent=g10525.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 3428 4267 . - 0 ID=cds.g10525.t1;Parent=g10525.t1 #PROT g10525.t1 g10525 MGTLRLQTCLFCVALMTTTMTFFAFQVSIGLQHGRRTARTAESTTEQPADSQESSFRFGYIDFMKLRSFNVLPTPMVLPVAEQVTLTAAADAQKATPSKESQSRMPERNSPPFQSHTAEVRMPSHRASHSSEPRPAGSANQSQLSDGGAFAADTAVPDKARTLDVAVVKMAENRSLKSQLEKQSVEHPTAVPDFCKESAFRRYDYVLRDGTLLGAYRDGGIPVGDRDVDMTVHVPEPTPSQTADNKGRSPPAINATVPVNCGFESVAPGPLSQLATLIGTIFADIARRAETEYGGRLHFKFLDGRGINVYFTTLNKGGAQCKADVGYVAHKGYRPPSAQCNCPFGPPDGEMRRCRRDNVLQTILGRYGSAWWLVLPAFKGFMDIRLGARSGLRSPVPSQVEKLMLPFVRADFDRDGRISRMELELMLRAQGMTADAVTIAFAEEQWVEKHLKVANELYTYGQDLKKYGPAYKFGDVAPH* # ORIGINAL: g10524.t1 original gene structure, not modified by PASA NODE_623_length_20040_cov_42.8658 AUGUSTUS gene 548 1564 . - . ID=g10524;Name=g10524.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS mRNA 548 1564 . - . ID=g10524.t1;Parent=g10524;Name=g10524.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 548 1564 . - . ID=g10524.t1.exon1;Parent=g10524.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 548 1564 . - 0 ID=cds.g10524.t1;Parent=g10524.t1 #PROT g10524.t1 g10524 MGAVVSQRLRDQLANHIHSPFPVSDKEFLRACAEGDVATVLRNTSFPRWPQSSIDVCNRGIIVASKNDMHDVICALLKVPGVDPGAYGNQAIKIASANGQSSSVKVLLLDGRADPTVDDNVCIRTACGRGHLACINTLLADKRVDPSAQNAQCLIDACDAGRCDLVRSLLLHPKIDPSVCGNRALTYACLSDNVECVYALLSDNRVDPNANDCFLRWSIEDGQASVVCALVLHGVVDTSPYAIPAYRLARKAGNKEAMVSLLMRHPELRRIAFPFTFAAKAHRGMNALREVVVTRVLMNPHHPIGYRRVEAEIIALMATAPKRMQELAARTRENAQGV* # ORIGINAL: g10530.t1 original gene structure, not modified by PASA NODE_623_length_20040_cov_42.8658 AUGUSTUS gene 19252 19983 . - . ID=g10530;Name=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS mRNA 19252 19983 . - . ID=g10530.t1;Parent=g10530;Name=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 19845 19983 . - . ID=g10530.t1.exon1;Parent=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 19845 19983 . - 0 ID=cds.g10530.t1;Parent=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 19531 19602 . - . ID=g10530.t1.exon2;Parent=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 19531 19602 . - 2 ID=cds.g10530.t1;Parent=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS exon 19252 19337 . - . ID=g10530.t1.exon3;Parent=g10530.t1 NODE_623_length_20040_cov_42.8658 AUGUSTUS CDS 19252 19337 . - 2 ID=cds.g10530.t1;Parent=g10530.t1 #PROT g10530.t1 g10530 MMYQYFIKIVPTQYVGPDGSFISSYQYSVTEHVKSVDPEKGKPGMPEHVGSVPHLLVKISGIVGGVFATSGMLYHYGVLLIETLKERKSRLFSPTLRL* # PASA_UPDATE: g10526.t1, single gene model update, valid-1, status:[pasa:asmbl_8540,status:3], valid-1 NODE_623_length_20040_cov_42.8658 . gene 5894 8362 . - . ID=g10526;Name=g10526.t1 NODE_623_length_20040_cov_42.8658 . mRNA 5894 8362 . - . ID=g10526.t1;Parent=g10526;Name=g10526.t1 NODE_623_length_20040_cov_42.8658 . five_prime_UTR 8095 8362 . - . ID=g10526.t1.utr5p1;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . exon 8093 8362 . - . ID=g10526.t1.exon1;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . CDS 8093 8094 . - 0 ID=cds.g10526.t1;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . exon 6929 7684 . - . ID=g10526.t1.exon2;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . CDS 6929 7684 . - 1 ID=cds.g10526.t1;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . exon 5894 6533 . - . ID=g10526.t1.exon3;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . CDS 6101 6533 . - 1 ID=cds.g10526.t1;Parent=g10526.t1 NODE_623_length_20040_cov_42.8658 . three_prime_UTR 5894 6100 . - . ID=g10526.t1.utr3p1;Parent=g10526.t1 #PROT g10526.t1 g10526 MPRSVVKYYQTVLLLGVLAAFAMVVFQYTEPLRNGLCGAIASQRLDVNALLAEQQSRSPTVRADLGIVMHEMYNSLQLVKNDVVLCMTASADKIDVLVRVVAEWDGPAVVAIYSRDEDMAKRTLASIGQLVRDGENTAFIHVQAVARDTFYPVNAMRNFAISAVPVDRGYSVFVLDADMMPSKGAYHELLRLNAVTQNAWKALVIPCFEFGNNSYDMAADVNMIPRTKKQLLATTRANMTRQSKLTYYPRGHSCTEYERWLYGTDSKPWLQSTYHWQYEPFFVVRRTSHFPLFDDGYVFWGGNKQSHTWLMFAMGYRFWTVPKVFSVHYPHPSLTPPTRATNTTNPADTEQLAKNRRRWQVGRVEISKKYGVALEDYDFQRIGVPPPFKPGKQPAS* # PASA_UPDATE: g10527.t1, single gene model update, valid-1, status:[pasa:asmbl_8538,status:12],[pasa:asmbl_8541,status:12], valid-1 NODE_623_length_20040_cov_42.8658 . gene 9242 11541 . + . ID=g10527;Name=g10527.t1 NODE_623_length_20040_cov_42.8658 . mRNA 9242 11541 . + . ID=g10527.t1;Parent=g10527;Name=g10527.t1 NODE_623_length_20040_cov_42.8658 . exon 9242 10527 . + . ID=g10527.t1.exon1;Parent=g10527.t1 NODE_623_length_20040_cov_42.8658 . CDS 9242 10527 . + 0 ID=cds.g10527.t1;Parent=g10527.t1 NODE_623_length_20040_cov_42.8658 . exon 11043 11541 . + . ID=g10527.t1.exon2;Parent=g10527.t1 NODE_623_length_20040_cov_42.8658 . CDS 11043 11460 . + 1 ID=cds.g10527.t1;Parent=g10527.t1 NODE_623_length_20040_cov_42.8658 . three_prime_UTR 11461 11541 . + . ID=g10527.t1.utr3p1;Parent=g10527.t1 #PROT g10527.t1 g10527 MVWPLPAMPAPALRETGRRTRPRLHIIGVTKLLLCTVLLLLVGVVYFALYLYANSADSTITFAVLMPHFHSRDRYSAGNGRHPSADGGVQPAPAAAVSMQPRGPRPTGLSLRSAPQPAANDVRSPLSISLPVGTMGSASFDSNTQSSMPSSVDRQPLSSTTSTLVSAQAPPSPSARNMSMMIRHLAPPSLRIAETFTHQAMWKAFRDMFDASDVETMRLDANVGLRPLPLNLSITMLDNRLALLPAEDIVLCLAASEDRFALLAKTIPAWDGPVVVGIFCSTQTCVDRVGSLGWLTTVRPNTAVLLVVSAVTNIFYPVNAMRNIMMDYVPPGRGHATFVIDSDFILSRNAYATLRRMYAANRAPGPRMGARRRRALVVPCFEFGANSYDVNSVTEAHSSLIPRTKEELLKLPREMVRPSKNLTFPGGHSCTEYDRWLYGTDKVPWMQSTYHYEYEPFFIVERTVDAPGFDEFFVMWGGNKQSYCFLLHLLGYQYYTVPGVFAVHHPHPYALTSPMRLKEREARGRRLAANHAYFVPLIRTMCSRYNTATVAVSIETVGFPLFYRPST* # PASA_UPDATE: g10529.t1, single gene model update, valid-1, status:[pasa:asmbl_8542,status:3], valid-1 NODE_623_length_20040_cov_42.8658 . gene 16518 18276 . + . ID=g10529;Name=g10529.t1 NODE_623_length_20040_cov_42.8658 . mRNA 16518 18276 . + . ID=g10529.t1;Parent=g10529;Name=g10529.t1 NODE_623_length_20040_cov_42.8658 . five_prime_UTR 16518 16785 . + . ID=g10529.t1.utr5p1;Parent=g10529.t1 NODE_623_length_20040_cov_42.8658 . exon 16518 17174 . + . ID=g10529.t1.exon1;Parent=g10529.t1 NODE_623_length_20040_cov_42.8658 . CDS 16786 17174 . + 0 ID=cds.g10529.t1;Parent=g10529.t1 NODE_623_length_20040_cov_42.8658 . exon 17461 18276 . + . ID=g10529.t1.exon2;Parent=g10529.t1 NODE_623_length_20040_cov_42.8658 . CDS 17461 17797 . + 1 ID=cds.g10529.t1;Parent=g10529.t1 NODE_623_length_20040_cov_42.8658 . three_prime_UTR 17798 18276 . + . ID=g10529.t1.utr3p1;Parent=g10529.t1 #PROT g10529.t1 g10529 MSFSAISMTRALPNFAQYLLVWAGVQQQQLDGRHDDARSHVDSDSHHVPGRKSDGAAVGERSDGTALNGDLAHQSKHVLSAAERFFIYGIFGFFDEICFTALHDIVNNTHDARFYGYSSLWSFPIYAISSIILERMYIALRSRNVHWVFRGIIYTTWTFMWEYWCGYVLRMFDACSWDYSSTPYHVSGLIRLDYGPIWFTASLGLEYLFVYLLNLSRPHLKEVVYDSKTAVRSHHAHHKRN* # PASA_UPDATE: g13390.t1, single gene model update, valid-1, status:[pasa:asmbl_7914,status:3], valid-1 NODE_517_length_21961_cov_39.9863 . gene 7674 10775 . - . ID=g13390;Name=g13390.t1 NODE_517_length_21961_cov_39.9863 . mRNA 7674 10775 . - . ID=g13390.t1;Parent=g13390;Name=g13390.t1 NODE_517_length_21961_cov_39.9863 . five_prime_UTR 10549 10775 . - . ID=g13390.t1.utr5p1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . exon 10209 10775 . - . ID=g13390.t1.exon1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . CDS 10209 10548 . - 0 ID=cds.g13390.t1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . exon 9590 10081 . - . ID=g13390.t1.exon2;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . CDS 9590 10081 . - 2 ID=cds.g13390.t1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . exon 9323 9451 . - . ID=g13390.t1.exon3;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . CDS 9323 9451 . - 2 ID=cds.g13390.t1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . exon 7674 9185 . - . ID=g13390.t1.exon4;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . CDS 8227 9185 . - 2 ID=cds.g13390.t1;Parent=g13390.t1 NODE_517_length_21961_cov_39.9863 . three_prime_UTR 7674 8226 . - . ID=g13390.t1.utr3p1;Parent=g13390.t1 #PROT g13390.t1 g13390 MRAAVLLALCLAWCVAIAAAKPVGLQSIPRDTPLRDVPRFFTPEDAAILSTASNFAVESVSATAAAEDFRQALGLLPTKCGVCTTFIHLVNDYIMSNKTLGELEFIAVKLCNNVLDNASKFKGPIVCPGLIAAYTPPVVFIVLQLALVPEDVCTRLQFCSSPAQVKLASSLPVEESEGHRLVSGKVAPAPAPTSASPKADSTKVFRVLQLADMHVDAMYKENTNAHCGKFTCCRESEGPGTAGYWGDYSCDLPIRTISHTLDFISKMDPRPDFIIWTGDNPPHDLSEESEESQLVASSVVGTLLRDHLSDFDIAPSLGNHEGFPANLYYQPTYKWLTDGLAEVWSDWLPADALATFREAGYYTMLVRPGLRIVSMNTQYGYQENFYFILNSDVPAVQKYYDWLNSTLLAAEAAGEKVFLVGHVPPGQPDAIESYGAFHRSIVTRFSKIIIAQTFGHTHLDQFEVIREKTGNTTSGDPVGVAFIAPSLTTYTNLNPTFRVYEFDDATLELLDFKQYYMNMSRANEVAASEMAAGTKPLTPPTFELEYSARDAYGLASMAPSEWMRMSDRMATDDDLLATYFKHRSSSARNDTCDILCRRTIVCMTRSASVDEYALCMGGVHDMPMFAVEGKVDPFAEHLC* # ORIGINAL: g13392.t1 original gene structure, not modified by PASA NODE_517_length_21961_cov_39.9863 AUGUSTUS gene 15184 17328 . + . ID=g13392;Name=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS mRNA 15184 17328 . + . ID=g13392.t1;Parent=g13392;Name=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 15184 15249 . + . ID=g13392.t1.exon1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 15184 15249 . + 0 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 15448 15598 . + . ID=g13392.t1.exon2;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 15448 15598 . + 0 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 15766 15882 . + . ID=g13392.t1.exon3;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 15766 15882 . + 2 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 16149 16370 . + . ID=g13392.t1.exon4;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 16149 16370 . + 2 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 16567 16703 . + . ID=g13392.t1.exon5;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 16567 16703 . + 2 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 16816 16914 . + . ID=g13392.t1.exon6;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 16816 16914 . + 0 ID=cds.g13392.t1;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 17269 17328 . + . ID=g13392.t1.exon7;Parent=g13392.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 17269 17328 . + 0 ID=cds.g13392.t1;Parent=g13392.t1 #PROT g13392.t1 g13392 MASSKESFLREDHRRFIKGYENERMDLEHWVTQHLRLSGIFWGLHSLALMGAESDLGADGILEFMRRCKRQSGGYGGNVEQDAHILHTLSAVQIAFLCRRTDVLDVDAIVRFIEGLQNSDGSFRGDEFGETDTRFTYCALSILKLLNRLYASKVDVSAALRHVMLCRNADGAFGSIPGSESHAGQTFCALATLEIAGQIESLPRKPTLCWWLSERQLDDGGTNGRPEKTSDACYGWWVTASLAMLKCKEWLGTDSLRHYLYQCQQQSHFRYVVIVESVMDTAS* # PASA_UPDATE: g13387.t1, single gene model update, valid-1, status:[pasa:asmbl_7913,status:12], valid-1 NODE_517_length_21961_cov_39.9863 . gene 40 909 . + . ID=g13387;Name=g13387.t1 NODE_517_length_21961_cov_39.9863 . mRNA 40 909 . + . ID=g13387.t1;Parent=g13387;Name=g13387.t1 NODE_517_length_21961_cov_39.9863 . five_prime_UTR 40 40 . + . ID=g13387.t1.utr5p1;Parent=g13387.t1 NODE_517_length_21961_cov_39.9863 . exon 40 909 . + . ID=g13387.t1.exon1;Parent=g13387.t1 NODE_517_length_21961_cov_39.9863 . CDS 41 631 . + 0 ID=cds.g13387.t1;Parent=g13387.t1;5_prime_partial=true NODE_517_length_21961_cov_39.9863 . three_prime_UTR 632 909 . + . ID=g13387.t1.utr3p1;Parent=g13387.t1 #PROT g13387.t1 g13387 SISRADAIEALIKARTSGSLDGLDRAINEITKDVDAAVLPAHRKEDLRALLTAAKKRYNDHDKAIKAKQTADAVADAVRIAEASKEASFIVHPFSVGGNVKALDTVVQKFRELLPTVAVLVTSTDGDRVLAVAGVVQASVDKSLKANEWIQAALAPLSNVKGGGRELVAQGNATGAANLAAAVDAAKAYAASKLSA* # ORIGINAL: g13389.t1 original gene structure, not modified by PASA NODE_517_length_21961_cov_39.9863 AUGUSTUS gene 2526 7421 . + . ID=g13389;Name=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS mRNA 2526 7421 . + . ID=g13389.t1;Parent=g13389;Name=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 2526 2543 . + . ID=g13389.t1.exon1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 2526 2543 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 2755 2922 . + . ID=g13389.t1.exon2;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 2755 2922 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 3038 3144 . + . ID=g13389.t1.exon3;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 3038 3144 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 3297 3408 . + . ID=g13389.t1.exon4;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 3297 3408 . + 1 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 3840 3905 . + . ID=g13389.t1.exon5;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 3840 3905 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 4271 4364 . + . ID=g13389.t1.exon6;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 4271 4364 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 4656 4823 . + . ID=g13389.t1.exon7;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 4656 4823 . + 2 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 5043 5101 . + . ID=g13389.t1.exon8;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 5043 5101 . + 2 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 5260 5408 . + . ID=g13389.t1.exon9;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 5260 5408 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 5573 5705 . + . ID=g13389.t1.exon10;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 5573 5705 . + 1 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 5859 5907 . + . ID=g13389.t1.exon11;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 5859 5907 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 6203 6381 . + . ID=g13389.t1.exon12;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 6203 6381 . + 2 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 6587 6730 . + . ID=g13389.t1.exon13;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 6587 6730 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 7042 7114 . + . ID=g13389.t1.exon14;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 7042 7114 . + 0 ID=cds.g13389.t1;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 7309 7421 . + . ID=g13389.t1.exon15;Parent=g13389.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 7309 7421 . + 2 ID=cds.g13389.t1;Parent=g13389.t1 #PROT g13389.t1 g13389 MDDGFKVPLLPSGKGKRRATDDDEDTSTRKRPAYDAYDSIDTGVSEEERRRILAMVENEEAEGEALDSVSMKKAVLAFEKKMYRNQELRVKYIDQPERFMESEVELHEEIQRLHVLATAPELYAELVQLNVIPSIEMTDVESPDEYKEEVDALVDALMESSGLEALVGNMERLNEGVREDDDGAHNSLAVVENLVELRQNIARDIVSRTQIMPWMMGRLRSGAPFDGVRLYCSEVLAILLQSVDENRVKLGELDGIDLLLRTVAPYKRKDPQSNEESEFVENLFDCICAALLSAPNKARFVDVEGIELCLIMLKERKTASQGALKAIDHALSGSQGGPGCDRLIDALGLKVIFPYFMKTPSSKKRQGLTDTEYEEHICSIVASLFRHVSESRRPRLLNKFVEDDFVKCDRLAELHRKYYALVVQKDAEYREEMEERREEEGDDFDEGTELVGLYLARLDAGLFTLQLIDYTMASAIAAGVPEIASRITMVLAQGGSSVDQVRSILKEYADNVGDALDSDSREREKGAITGVVDRMNAAISDPK* # ORIGINAL: g13391.t1 original gene structure, not modified by PASA NODE_517_length_21961_cov_39.9863 AUGUSTUS gene 11511 14237 . - . ID=g13391;Name=g13391.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS mRNA 11511 14237 . - . ID=g13391.t1;Parent=g13391;Name=g13391.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 14091 14237 . - . ID=g13391.t1.exon1;Parent=g13391.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 14091 14237 . - 0 ID=cds.g13391.t1;Parent=g13391.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 11511 13877 . - . ID=g13391.t1.exon2;Parent=g13391.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 11511 13877 . - 0 ID=cds.g13391.t1;Parent=g13391.t1 #PROT g13391.t1 g13391 MRKRQGCFNCKCGKNYKSKAPFDKHIAVCADHGSVASSVNGSQIGSDDGAVMQRRVSPRNVGRAQPRTGRASNPVLLDANEAAEDITEVQVNLADEDDQIDESESRSANEHSCGRSGCDFVAVDATDLKKHIQGHAKKRPTGGCTSLLPSYRTRFLNELFDMPTIDPAVEGICSICSRTDHEDVMLVCAACSRIAHYWCADAKELPRPPYYWTCGQRRCGEASPFVCGDCGISYKTFKSLRDHKLKGHDGPPNSRKGKTAAKRKRSVDTGASDGDEGQDGSVRRRRPPRAASARATDYLRSVMGEDGEDSDGSDSNDFKVQREGNSGGKQRGIGCYFAPRLAHSDDDADAENTAERTCAYPSLRPTKAMFTPAESKLLSGAAGSVNVRQVGSEDTAIPAFTGGTGHAPHAWSAESQIWFANAGGPVVAAEWVPLPQSHAEQYFSVATLATIDGKRTLPQTGECVWEGEGVIQLWRVTDGEPQLAMALVHDQGFVWDFAWCPEKVYEPAEVDGSSADDDTQSLRRLGLLAVAFSSGCVHVYAIPHPGTVPLHVRAQPMASLKVPNTYCTAVTWSGDSTVYVGCGNGSIATFLLQRPETSNSPILPLLWPTGWDGPMFPATVFPAHDTPIRGLAVSPESATVVASFACEPTLRVWNVNDTSGGPANECVGAAAFFSSDATWSWPELIVLATDEGARAVSVPKTGRMEVAAIVRHEESACSVSVSRDRTRIASCGKDGVVRLRLAERAFNTPGLRAKTTHFFYAVQPCVENGGVSWTASESDMASENGEEKEECTKFLDPRMSMTRVRWNPNAGSGGWLLSASATGIVRGDLVARATYLC* # PASA_UPDATE: g13393.t1, single gene model update, valid-1, status:[pasa:asmbl_7915,status:3], valid-1 NODE_517_length_21961_cov_39.9863 . gene 17672 19664 . - . ID=g13393;Name=g13393.t1 NODE_517_length_21961_cov_39.9863 . mRNA 17672 19664 . - . ID=g13393.t1;Parent=g13393;Name=g13393.t1 NODE_517_length_21961_cov_39.9863 . five_prime_UTR 19412 19664 . - . ID=g13393.t1.utr5p1;Parent=g13393.t1 NODE_517_length_21961_cov_39.9863 . exon 19209 19664 . - . ID=g13393.t1.exon1;Parent=g13393.t1 NODE_517_length_21961_cov_39.9863 . CDS 19209 19411 . - 0 ID=cds.g13393.t1;Parent=g13393.t1 NODE_517_length_21961_cov_39.9863 . exon 17672 19081 . - . ID=g13393.t1.exon2;Parent=g13393.t1 NODE_517_length_21961_cov_39.9863 . CDS 17845 19081 . - 1 ID=cds.g13393.t1;Parent=g13393.t1 NODE_517_length_21961_cov_39.9863 . three_prime_UTR 17672 17844 . - . ID=g13393.t1.utr3p1;Parent=g13393.t1 #PROT g13393.t1 g13393 MASPSVVAEACDYAVAHGIVMGASTAGESGKAHVVSHAPFTLAPSPFPASQYRAAVDLQPHFNYLVDRISRDYDFLKATLRGAIQSDPFTARLWDIYEESIRGAPQRITLGLFRSDYMLHGGSDDDVREGRIKQVEINTIAASFGSLGTFMSDLHAYVTSREETPTPREALPKNGALAGLAAGMAHAWRLYVADAERTRDTSAPPPLPPVVVMIVQPGETNSYDQRHLEHALWESHGIRMLRRSLRDFLERGSTEGDGGALSIDGREVAVAYFRAGYTPRDYPSDGEWTARSLIETSRAVKCPSIAVHLAGAKKVQQAVAVPGVLERFVSDPFVVDRLRESFTGLYSLDPGADGDANVALALRDPARYVLKPQREGGGNNLYGDDVVAALSSMTPEERSAYILMDLIQPPSVANHYVRSGVATPARMVGELGVFGAIIREGDCIVRNDACGHLLRSKPVGVNDGGVAAGVAVLDSPLLV* # ORIGINAL: g13388.t1 original gene structure, not modified by PASA NODE_517_length_21961_cov_39.9863 AUGUSTUS gene 1395 1916 . - . ID=g13388;Name=g13388.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS mRNA 1395 1916 . - . ID=g13388.t1;Parent=g13388;Name=g13388.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 1788 1916 . - . ID=g13388.t1.exon1;Parent=g13388.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 1788 1916 . - 0 ID=cds.g13388.t1;Parent=g13388.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 1395 1664 . - . ID=g13388.t1.exon2;Parent=g13388.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 1395 1664 . - 0 ID=cds.g13388.t1;Parent=g13388.t1 #PROT g13388.t1 g13388 MHIPIQYGANPDQWCLLELQGSIETRSGDVRGRDLGRLSLDESGNPRIIIGSHELVGKRLDLKKPFAVLRKKVTRPPGYDPMECDDDSGGADAAAGDTAYEVVAIVRQKFVFKNRPKPIITPSAILIKTAGK* # ORIGINAL: g13394.t1 original gene structure, not modified by PASA NODE_517_length_21961_cov_39.9863 AUGUSTUS gene 21071 21593 . + . ID=g13394;Name=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS mRNA 21071 21593 . + . ID=g13394.t1;Parent=g13394;Name=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 21071 21223 . + . ID=g13394.t1.exon1;Parent=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 21071 21223 . + 0 ID=cds.g13394.t1;Parent=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 21338 21405 . + . ID=g13394.t1.exon2;Parent=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 21338 21405 . + 0 ID=cds.g13394.t1;Parent=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS exon 21497 21593 . + . ID=g13394.t1.exon3;Parent=g13394.t1 NODE_517_length_21961_cov_39.9863 AUGUSTUS CDS 21497 21593 . + 1 ID=cds.g13394.t1;Parent=g13394.t1 #PROT g13394.t1 g13394 MPLKYIVLGGAGDVGSRAVEELVITPGIELVTIADRNVEVAQQIAKRLEGKGAKVVVKQVDAFNHAGLVEAIKGHDVAASALGPFHLFETRCASAAIEAGVSYCR* # ORIGINAL: g7875.t1 original gene structure, not modified by PASA NODE_20091_length_151_cov_41.8947 AUGUSTUS gene 1 151 . - . ID=g7875;Name=g7875.t1 NODE_20091_length_151_cov_41.8947 AUGUSTUS mRNA 1 151 . - . ID=g7875.t1;Parent=g7875;Name=g7875.t1 NODE_20091_length_151_cov_41.8947 AUGUSTUS exon 1 151 . - . ID=g7875.t1.exon1;Parent=g7875.t1 NODE_20091_length_151_cov_41.8947 AUGUSTUS CDS 1 151 . - 1 ID=cds.g7875.t1;Parent=g7875.t1 #PROT g7875.t1 g7875 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL # ORIGINAL: g2702.t1 original gene structure, not modified by PASA NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS gene 148 783 . + . ID=g2702;Name=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS mRNA 148 783 . + . ID=g2702.t1;Parent=g2702;Name=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS exon 148 251 . + . ID=g2702.t1.exon1;Parent=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS CDS 148 251 . + 0 ID=cds.g2702.t1;Parent=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS exon 463 514 . + . ID=g2702.t1.exon2;Parent=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS CDS 463 514 . + 1 ID=cds.g2702.t1;Parent=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS exon 679 783 . + . ID=g2702.t1.exon3;Parent=g2702.t1 NODE_5371_length_884_cov_26.5488_potentialcontaminant AUGUSTUS CDS 679 783 . + 0 ID=cds.g2702.t1;Parent=g2702.t1 #PROT g2702.t1 g2702 GSNDAKRCKMGDKFTAAPTQYLLSTLATLVTCGVGTDPLNFSDIDTKMILGQDLDFFAKQLREGTNMEATLAMTIALAADRDGLLDA # ORIGINAL: g1913.t1 original gene structure, not modified by PASA NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS gene 737 1003 . - . ID=g1913;Name=g1913.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS mRNA 737 1003 . - . ID=g1913.t1;Parent=g1913;Name=g1913.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS exon 737 1003 . - . ID=g1913.t1.exon1;Parent=g1913.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS CDS 737 1003 . - 0 ID=cds.g1913.t1;Parent=g1913.t1 #PROT g1913.t1 g1913 MSNSFFPGTDRRATTVLLFNCTDRRAATVLSFDGTVRRATTVLSFDGTVRRATTVLSFDSTVRRAATVLSFDCKNNHSQSPPSNFPKK* # ORIGINAL: g1914.t1 original gene structure, not modified by PASA NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS gene 1035 1505 . + . ID=g1914;Name=g1914.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS mRNA 1035 1505 . + . ID=g1914.t1;Parent=g1914;Name=g1914.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS exon 1035 1505 . + . ID=g1914.t1.exon1;Parent=g1914.t1 NODE_3828_length_2668_cov_35.9757_potentialcontaminant AUGUSTUS CDS 1035 1505 . + 0 ID=cds.g1914.t1;Parent=g1914.t1 #PROT g1914.t1 g1914 MSDEEVEVQSAPKFKSQVLVPAMEEWKRRFSNDSDFIDHFDTQCGQMSVWLASYKFNDELPKIDFMVRNNINGSYRSIESDRKFLFGRAKVQTNQSPAVDILWVVALLDDDLPDQMVSSDMYEYYDWKRIDPTADAELIRSYLLGESDSAEFITLK* # PASA_UPDATE: g8225.t1, single gene model update, valid-1, status:[pasa:asmbl_1782,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 24108 25213 . + . ID=g8225;Name=g8225.t1 NODE_14_length_67523_cov_40.9066 . mRNA 24108 25213 . + . ID=g8225.t1;Parent=g8225;Name=g8225.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 24108 24132 . + . ID=g8225.t1.utr5p1;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . exon 24108 24344 . + . ID=g8225.t1.exon1;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . CDS 24133 24344 . + 0 ID=cds.g8225.t1;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . exon 24573 24646 . + . ID=g8225.t1.exon2;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . CDS 24573 24646 . + 1 ID=cds.g8225.t1;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . exon 24967 25213 . + . ID=g8225.t1.exon3;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . CDS 24967 25115 . + 2 ID=cds.g8225.t1;Parent=g8225.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 25116 25213 . + . ID=g8225.t1.utr3p1;Parent=g8225.t1 #PROT g8225.t1 g8225 MTPITSVKMLSVARYAAIARPIHVSLARRGFSASSFRSHQTTDIKMASPKETVQQAIAANAVMVFSKSYCPYCTKVKGLFKSINVPFYAIELDQVANGDAIQSALRDLTGQSTVPNVFVKGKHVGGCDDTHKKHSTGELAKLLA* # ORIGINAL: g8227.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 30613 33029 . + . ID=g8227;Name=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 30613 33029 . + . ID=g8227.t1;Parent=g8227;Name=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 30613 30691 . + . ID=g8227.t1.exon1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 30613 30691 . + 0 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 30817 31123 . + . ID=g8227.t1.exon2;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 30817 31123 . + 2 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 31213 31501 . + . ID=g8227.t1.exon3;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 31213 31501 . + 1 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 31588 31778 . + . ID=g8227.t1.exon4;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 31588 31778 . + 0 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 32083 32261 . + . ID=g8227.t1.exon5;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 32083 32261 . + 1 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 32351 32445 . + . ID=g8227.t1.exon6;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 32351 32445 . + 2 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 32581 32769 . + . ID=g8227.t1.exon7;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 32581 32769 . + 0 ID=cds.g8227.t1;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 32898 33029 . + . ID=g8227.t1.exon8;Parent=g8227.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 32898 33029 . + 0 ID=cds.g8227.t1;Parent=g8227.t1 #PROT g8227.t1 g8227 MPHTEAVVEKENDGGAESADAQNGSNEPYEPTGVFDDDYQALCSRARIAGAQITRRSNAAAIVPSTGEDAPVTPVPEADFDEQRIVVDYDPEEKGAAHEIAVRGWKLDIHNAAVLKALVPSSTRLTTLSFWNAGLTDATFGAIAEAIPHSTIRVLHLDWNPVSETLYAQLVREDSPLRTLSLRGNGITCEGAKSIAEALKGNRALAILNIWKNRICDAGAVSLAESLKTNRTLLSLSLGRNLIKDPGICAFAEVLSKYALTHDEIVARRKYKTEMEQREGEEQVGIAVVNPQASAADLSKKGAKSAEAKDKGAAAKKGAGKEVPLKKVEEKEKPGAKKGAVEDKAGKKSAAPVPDSKSKKKEKSSAGKKRTAEEEREEPEVDYFNPLREPMEEIDGQWFVTGNRTLANLNLSYNRITESGVESLLAALKKDMERVGLLRLSLEGNCASEDSSVIQRLRAFMASRDPTGGPQQSPEEPEVVVEQEAK* # PASA_UPDATE: g8234.t1, single gene model update, valid-1, status:[pasa:asmbl_1796,status:3], valid-1 NODE_14_length_67523_cov_40.9066 . gene 54110 56541 . - . ID=g8234;Name=g8234.t1 NODE_14_length_67523_cov_40.9066 . mRNA 54110 56541 . - . ID=g8234.t1;Parent=g8234;Name=g8234.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 56374 56541 . - . ID=g8234.t1.utr5p1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 55989 56541 . - . ID=g8234.t1.exon1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 55989 56373 . - 0 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 55757 55865 . - . ID=g8234.t1.exon2;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 55757 55865 . - 2 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 55571 55679 . - . ID=g8234.t1.exon3;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 55571 55679 . - 1 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 55286 55474 . - . ID=g8234.t1.exon4;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 55286 55474 . - 0 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 55024 55167 . - . ID=g8234.t1.exon5;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 55024 55167 . - 0 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . exon 54110 54896 . - . ID=g8234.t1.exon6;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . CDS 54171 54896 . - 0 ID=cds.g8234.t1;Parent=g8234.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 54110 54170 . - . ID=g8234.t1.utr3p1;Parent=g8234.t1 #PROT g8234.t1 g8234 MASNPTTLGAPAAGGSLPPLGRRRSNDLRGETLQKHRQFLKQFAQQQRSGTPTVPLPVRPPEKFTKEEAEAEAMYLALEYIRKRNEDMCAEETAGGASDIDEQGMLSITGSVVAKLMKMDLTDYALDSGPEGVLFDGEKLAMTVFSEVDKGIQTWKDTRAGRSQKPSMVYDVQTFAAQGRRPSMEDKHVSILDLNELLGLEGFPPQAFFAVYDGHGGIEAAEYARTHLHVFISRQESFKKDITKALMDGFLRADESFLAKAEREGITSGATCISTLIRGKELYVSWLGDSQAILCRDGKALQLSFPHKPDREDEKLRIENAGGIVVWYGAWRVNGVLSVARAIGDKHLKKYVIGEPDILEFGLQNSDEFLVLGCDGLWDVMDPQGVVDFVHQYLDNNDGDTKGSAEALVENALELGSTDNVSVIIVFLHKPPSSKPISVAPPAHAAGGAAAPSSEPACAAPAVDVEYKSSRRGSKADVDQSAQGAGGRRGSRTDTDATSGRWASQDDPSAALARVALQQGRRGSVPATDAVPIKPAPEKDDDEAKDEIEGVPL* # ORIGINAL: g8238.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 64361 66625 . + . ID=g8238;Name=g8238.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 64361 66625 . + . ID=g8238.t1;Parent=g8238;Name=g8238.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 64361 66625 . + . ID=g8238.t1.exon1;Parent=g8238.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 64361 66625 . + 0 ID=cds.g8238.t1;Parent=g8238.t1 #PROT g8238.t1 g8238 MASSHIANAAVCRLLSMGRLSVVPPVRLFMTHTHLAHPSLPAQRCLHGRAALPSSYALYQCHLRNTAVGPTFTVGVFHPISCTHFLPHRLRHFKARIDNISFARDNAEEIDDVPPLGERSKKKKHKSSTVVPIVKKIEIYDGIPARRLAELVGSTVDNLRPVLEDSGLIFTPGRPISVPVDVAELIVLDRRYKPVRVRAPVTDALPRPPAPKGNLPRRPPVVTIMGHVDHGKTTLLDTLRKSAVAASEAGGITQHIGAFAVALPNGDTVTFLDTPGHEAFSSMRSRGAQATDIVILVVAADDGIMPQTRESIDHARAAGVPIVVAISKIDKSNADVERAKRQLMDAGVRLEDMGGDVLAVPISAVQGTNISQLIEAVSLQAELLDLRGDASGPAEGMVIESRLDRNRGPLVTALVKRGTLKNGDCVVAGTAWGKVRTLVGPLGTAVAAAGPSTPVEIVGFKEVPALGEIILVVPSEERAKSVAELRQSLLDAEMSHEASVAQKKITLAATQERTEDRLALRAMNYRAARAVRNANHGRMIEAKRDEGDGTPCLNVLLKTDVRGSLEALVPCIEALPQDRVRVKIVAAEIGALTDSDVNLADVASAEVILFNAPIPKPVESVARSRGVHISEHRIIYALLDDLRSKMARLLPPVTEVKVIARAEVLAVFNKGKRAGAIAGCKVTEGPLQRKVLARVVRGGAVVHEGRMESLRQVKENVESVQTNVECGLGIEGFDGFVAGDIVENYEIVNVPQSL* # ORIGINAL: g8232.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 45617 50820 . - . ID=g8232;Name=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 45617 50820 . - . ID=g8232.t1;Parent=g8232;Name=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 50735 50820 . - . ID=g8232.t1.exon1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 50735 50820 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 50525 50641 . - . ID=g8232.t1.exon2;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 50525 50641 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 50352 50448 . - . ID=g8232.t1.exon3;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 50352 50448 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 50156 50266 . - . ID=g8232.t1.exon4;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 50156 50266 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 49944 50054 . - . ID=g8232.t1.exon5;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 49944 50054 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 49379 49443 . - . ID=g8232.t1.exon6;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 49379 49443 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 49172 49274 . - . ID=g8232.t1.exon7;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 49172 49274 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 48905 49079 . - . ID=g8232.t1.exon8;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 48905 49079 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 48593 48788 . - . ID=g8232.t1.exon9;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 48593 48788 . - 2 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 47958 48348 . - . ID=g8232.t1.exon10;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 47958 48348 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 47302 47626 . - . ID=g8232.t1.exon11;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 47302 47626 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 46936 47095 . - . ID=g8232.t1.exon12;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 46936 47095 . - 2 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 46620 46751 . - . ID=g8232.t1.exon13;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 46620 46751 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 45831 46494 . - . ID=g8232.t1.exon14;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 45831 46494 . - 1 ID=cds.g8232.t1;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 45617 45727 . - . ID=g8232.t1.exon15;Parent=g8232.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 45617 45727 . - 0 ID=cds.g8232.t1;Parent=g8232.t1 #PROT g8232.t1 g8232 MRCLVRCSIVILAAVFLSTQCAATEYAWRVVEENGIRPHPGCDHASSVFGDEVYVFGGYSEKDGALLKYNSLLRYDPLNEKWTEIAVNGTQPSPRSASAAAIVGSLFVVIGGIDETDTTLNDVHYVNLSSSNPTWIQPSVTGTANAPPGVSWGTVTSFGSKVFIFGGYYYETDQGNTPFNVTKVRSWLDDAAAQNAAAAKSSADAITASRAFLGSLTDADSAATINATYDNFLSYWTNTSNTNAPSTDCGLASCTPANCTVPPPLSGARCVYYSGAVYIVGGWTCSSANTGGPDCFNHEVYVWNVTTNQWTVGNVQTAMPDGAVPPDTSFGGLALVNNTAFSVGGGYLDSAGDCEGLLMYGGCKPPGSYFDDTDLLYAVQTDPLQTTATGDALTFGTAGQTGRILVRVRDTMGRFVEFGGEELSAFGFSIGQYQAYFRADIKDFSNGTYAIDYLATVSGPYKLSITLNRVDIVGSPFNISVLPEEPDVAQTYTYGPGIKKVVATYPARFFVYSADKFGNPSPAKNGKIFTVNFVSNEFPSMQQSVSVSDYTSLDDGYPVWFTVNMPGTYNVTVLYGNDSISGSPFELLVLPEATDNRVEGVYIFFLSLGCVLVCVSIVMSIRLYQSREVKIFKSASPQFLALILAGSCISYSWVFFAYPTPTSALCTVQQWCIHIGFAFILCALVLKTQRIAIIFNSKLNKKVRLNDVVLFRYFAGAVSVFIAYMIIWSAAGAPYVETTSGLTVTESSSGYTLVDDKINSQCHTNWWNYVIMIVELIVLLYGIRLAFVVRKTPNAFNESKFISASVYNWFFVSVIVQLIIQFAVSKDSNITFALTAIQVDLTVGMAVALIFFPKHRAHRLGKGDGTSTSATGDSSQTRMTDMDSKLSGTGDARAFTLLQDECKRLMRDNEKLRQIMMRHGNRHVDKGHAIASKRPDLSEIVVRPDQD* # ORIGINAL: g8237.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 63283 64030 . - . ID=g8237;Name=g8237.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 63283 64030 . - . ID=g8237.t1;Parent=g8237;Name=g8237.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 63964 64030 . - . ID=g8237.t1.exon1;Parent=g8237.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 63964 64030 . - 0 ID=cds.g8237.t1;Parent=g8237.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 63283 63842 . - . ID=g8237.t1.exon2;Parent=g8237.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 63283 63842 . - 2 ID=cds.g8237.t1;Parent=g8237.t1 #PROT g8237.t1 g8237 MAAPAPVAPAAAVTRITLHVTDANLTARPQERVGPADFEILKVLGTGAFAKVFLVRKRHGYHTGKLFAMKVLKKAVIVQESKSVEHTRAERNILAAVRESPFIVNLQYAFQTEGKLYLILDYHRGGELFAVLAKRGRFAENEVRFYGAEIVLAIEHLHRLGVVYRDMKLENILLDAEGHIVITDFGLSKEVAADDSDGRAHSFCGTIE* # ORIGINAL: g8224.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 22158 23827 . - . ID=g8224;Name=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 22158 23827 . - . ID=g8224.t1;Parent=g8224;Name=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 23585 23827 . - . ID=g8224.t1.exon1;Parent=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 23585 23827 . - 0 ID=cds.g8224.t1;Parent=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 23373 23471 . - . ID=g8224.t1.exon2;Parent=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 23373 23471 . - 0 ID=cds.g8224.t1;Parent=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 22158 23261 . - . ID=g8224.t1.exon3;Parent=g8224.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 22158 23261 . - 0 ID=cds.g8224.t1;Parent=g8224.t1 #PROT g8224.t1 g8224 MKLLCDLEIAAASSGATVGPSSRARQSIVAAALTVTRARTLAGDVRRDAAAPDGRSVTTPQRDRLLLVLFTKKSAKGIKYELEGNVERIFGKFADSGKATIRLVRPQIDLCVSRAKPASLKAFLTLAHRASARPSSVTDDDLACGGESVDNAAAGTADTVAPPIAHVASGPARTTGGGMVAAVGGVDLQRRLIIDANTRAIPAKLPPHLSTLVVGDRRGLSLLSGAGAELALLDTLEISGCALTALPPALFELARLTTLRIRGNRLAGLPDRIGRLSALAHLDARDNAIDHMPRILCALRGLSTLRLGNNRIAALPSDIGRLTSLRHFDIGDNALETFPRELFRLSLKEFRYSGNPLKQERMVDVSCLRVPSLFEACARAFLTLPVSTRGDHMLAAFGSTETPPFLVDALERDPRMCARCGKAYFGANCVVLVDCVRLPPSFASQTDADRATPEIPVEFRWCSWRCAATHASFRSAVQNGT* # ORIGINAL: g8226.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 . gene 25205 29845 . - . ID=g8226;Name=g8226.t1 NODE_14_length_67523_cov_40.9066 . mRNA 25205 29845 . - . ID=g8226.t1;Parent=g8226;Name=g8226.t1 NODE_14_length_67523_cov_40.9066 . exon 29752 29845 . - . ID=g8226.t1.exon1;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . CDS 29752 29845 . - 0 ID=cds.g8226.t1;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . exon 29438 29604 . - . ID=g8226.t1.exon2;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . CDS 29438 29604 . - 1 ID=cds.g8226.t1;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . exon 25205 29288 . - . ID=g8226.t1.exon3;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . CDS 25314 29288 . - 0 ID=cds.g8226.t1;Parent=g8226.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 25205 25313 . - . ID=g8226.t1.utr3p1;Parent=g8226.t1 #PROT g8226.t1 g8226 MPSVPRGELMISAGDEIMVNVKGLPRGFWHGEINGRKGVFPSEAVIETLVYAPGHETPDVYVPTDEDLENLRQATEELIRELENDNWSYSRSRHATLNRLVETGAEYYASLEQNAPHMFEEFERGMYSRLEETQRNFYIPDDYHAHVDETEHANTDHGEHAHGYDTEIIDGHMAHFSHDEQSPHDEGADIFTEHAHNHAHWLEDAGYASPDSHDSLDEANSVGHASAAEHQSHDSAEVAQEDADAGAHDHSEATETHEAHAGAGSTLVEAAADWGVGGHTPDAAPVAEQSSSNVASEGAAPSSEQPLAIDELAPEVIAAPDDATGTRAGIEVPPMGGLPSLLAPADAHSVVNSVLASSIGMAEETAAATPSNAPLGAEPVQAMDSSSSDLGFDELLAGNELKSNDETLNPAGNMKASDDAGIPAEIPPVVAVQVEDLLNGIVPLPPASGGEEPSERVEVPVSPDATDQVTGPNVVAPSLTYSPSDARTATPDAQPEGAEPVARPPDTRRLPLDSGASTNTLEPVTNAYFEPLLHLYEVPLLQAVATSLFGLLTIVLVRACCFGRTASATTNGTSQGTVSKGVAEAEKRLMDALRTLEEEKAALVKKLRDEEGRSRSFAGEVDRARQELQNARHEAQQMEQRTAELEQRAASIIAERDEAQARAASAVSEEKLSVALQTVAAEKDRADRAAEEASALAANLAEERERRAQLEADTASEKAELEARFEGALELQKKAQADAKAMAAELDVLRVYFKHDVSTGDVDEEEGDDGAKKPPSDATLVDALRLEVARERAGRVSAEEERDRLADVLESHRASREAWQAEKAALEARVDAAAADTETARSALAEMEEERKQDKRRLGVVKDFFEEETAKAKAHAEECEAREVSVRSELSARVAQLERQLAESRGLCASLERKAADAEEAHAAQLGGIQEAHTAYAHELHASHVAYVDDMQRMHAAQVAELRHTFASQMAGLQQAHATALSTSQLEGATALANADATRTSGAQALESMRADHERVVADLTRRLSEAELMLEERAKEVVFLHSRQSDLTEANRKMQQQLAARPRTPHGNAVPPQGQPPQGQPPQQQARPGQGPPQQARPTQPGHHPGQHPQQSPHMTAAAPLPSMPPPGGRHTPVGYGAQYGHDGGVLLGQGHVHGSANPTPSASPASAPVAPRGVRPPGGLRPAPPQQQQQQQQQQQQRPPQAQQPPPPTQSQSLPPSRGPTPAGHAGPPHPQGHTQAYPQPQPQPQPQQQMGQRPQRPPSAGPPSQAQSPPRMAAPGSSAATGQGYPPSQQQPQQQQQSTHQQAMRDDGYGAPPPAPPGADRAAPPRGRNPRMMPMPGQAPPPLGNASGSMYAPAAANGRAVSDGGRPPSVHGQPLPPQHAYGQDGRDGGDEQSSSGATAMEPMWVTMT* # PASA_UPDATE: g8231.t1, single gene model update, valid-1, status:[pasa:asmbl_1784,status:3], valid-1 NODE_14_length_67523_cov_40.9066 . gene 40433 45465 . + . ID=g8231;Name=g8231.t1 NODE_14_length_67523_cov_40.9066 . mRNA 40433 45465 . + . ID=g8231.t1;Parent=g8231;Name=g8231.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 40433 40754 . + . ID=g8231.t1.utr5p1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 40433 40934 . + . ID=g8231.t1.exon1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 40755 40934 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 41057 41191 . + . ID=g8231.t1.exon2;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 41057 41191 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 41337 41460 . + . ID=g8231.t1.exon3;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 41337 41460 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 41603 41781 . + . ID=g8231.t1.exon4;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 41603 41781 . + 2 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 41884 42126 . + . ID=g8231.t1.exon5;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 41884 42126 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 42337 42479 . + . ID=g8231.t1.exon6;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 42337 42479 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 42571 42844 . + . ID=g8231.t1.exon7;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 42571 42844 . + 1 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 42959 43038 . + . ID=g8231.t1.exon8;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 42959 43038 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 43207 44251 . + . ID=g8231.t1.exon9;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 43207 44251 . + 1 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 44334 44409 . + . ID=g8231.t1.exon10;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 44334 44409 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 44511 44632 . + . ID=g8231.t1.exon11;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 44511 44632 . + 2 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 44751 44828 . + . ID=g8231.t1.exon12;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 44751 44828 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 44926 45048 . + . ID=g8231.t1.exon13;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 44926 45048 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 45148 45239 . + . ID=g8231.t1.exon14;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 45148 45239 . + 0 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . exon 45349 45465 . + . ID=g8231.t1.exon15;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . CDS 45349 45451 . + 1 ID=cds.g8231.t1;Parent=g8231.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 45452 45465 . + . ID=g8231.t1.utr3p1;Parent=g8231.t1 #PROT g8231.t1 g8231 MVPADARVMRGRVLSRVGSVGEMGVPNGARNNAGDAGAHSAAAYALQANLVALLNDPTPEGRKENQMIYAKAWGEAWTRPVLSPHPDIPRIARSDFERYLTRIYGDNPYRQKPLGRPLAPEPIGLPDVSDSDEAVRDPAAVRRKLEEAAQTINDALVDVPQEVFSPEFRLSDPAIFESILRVEEHMRLEAEGRAHFMSSCKLHQEKLSHYLDMVEMQLARQISLRSGAFFGAMRSQDDLYDEVDSCCLEIHTLRRQLAVADGALVVGALDIPQMLRQRTNTVLLYRKLRLMMSVQQTQPTIQLLLASSDYVRALELIAATHEILHTELAGVQCFRHLGSQLAEMGRLIGTMMESDLLACALDCATAAGDGSALDESTALAAVEHRADRFHDRLAPILLGLVHAHKTASLAAYREAVHTRIKLAIKESVSNYLSSVNDDVLRTEASLGDEKKTSSLTEQMRQLGFRHWLQMLACIYAALGDILVGLRAVHSIIASVVGDGLQAPSFSTAHVQRDEDASGRSGRGHVPPGKSASAPTLDSSHSDVVTGASSIYAGDALEGDELIAALAGSAPPSHVPNAAVKPDFIAPSIPDAGGSTSAHDAMGVPSVISSDSGDRVRFLRDSDELLASAVELAHARCAKLLGVRSNQTERLSSGDFVQFFRSCDAFIAATELVARRGGLGLRGALLSQAKRFMLSFHDQRVVSLSALLREERWVQSEVASELQAIVLRPLELIPDGIAASAGLLSGSVDRTDAGTLRIQGRDYRVAGCALMFLKMVTEYCECAAGIPALAVDVMSRLCLLLKLFNTETCKLILGGGVGLKTITAKHLALTVQTLSAVVAQIPVVRALLSSQLPERQRVMLSELDRINKDYVDHIDQIRKKIVSIMNDVFSHVLKDFRLVDDLPSGTASAYMRALVKETGKLHKVLQDLLPADDMKLIFGQVFSLYNSRLQEAYSKVDLRQSSLQKRVNTDVRFFIDNLTGLGGGMQGPGNDLLAFARAH* # ORIGINAL: g8217.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 2605 3105 . - . ID=g8217;Name=g8217.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 2605 3105 . - . ID=g8217.t1;Parent=g8217;Name=g8217.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 2605 3105 . - . ID=g8217.t1.exon1;Parent=g8217.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 2605 3105 . - 0 ID=cds.g8217.t1;Parent=g8217.t1 #PROT g8217.t1 g8217 MRTHVTYSNNRVSHRTHTRAPNLVTVARPHVLSYYSHTWHVATNAALLIVCTVLFVVIRLLRLYSKGARFVTIFFYFTNVPLEYYPYLYKLTVAELGSLGWKLHPQLGVLYKVHSTRVSASGDLQTIMRRHPMLATVLAARISVPRTKAEVDMYLHGSRSKSGFFW* # ORIGINAL: g8218.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 3858 9020 . - . ID=g8218;Name=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 3858 9020 . - . ID=g8218.t1;Parent=g8218;Name=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 8655 9020 . - . ID=g8218.t1.exon1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 8655 9020 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 8188 8517 . - . ID=g8218.t1.exon2;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 8188 8517 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 7952 8050 . - . ID=g8218.t1.exon3;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 7952 8050 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 7744 7860 . - . ID=g8218.t1.exon4;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 7744 7860 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 6562 7500 . - . ID=g8218.t1.exon5;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 6562 7500 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 6154 6375 . - . ID=g8218.t1.exon6;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 6154 6375 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 5798 6038 . - . ID=g8218.t1.exon7;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 5798 6038 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 5358 5542 . - . ID=g8218.t1.exon8;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 5358 5542 . - 2 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 4990 5148 . - . ID=g8218.t1.exon9;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 4990 5148 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 4792 4879 . - . ID=g8218.t1.exon10;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 4792 4879 . - 0 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 4436 4573 . - . ID=g8218.t1.exon11;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 4436 4573 . - 2 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 4235 4280 . - . ID=g8218.t1.exon12;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 4235 4280 . - 2 ID=cds.g8218.t1;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 3858 4038 . - . ID=g8218.t1.exon13;Parent=g8218.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 3858 4038 . - 1 ID=cds.g8218.t1;Parent=g8218.t1 #PROT g8218.t1 g8218 MVNAPFGWQAVQTVAIVALALALALALAPAPLAAASLSTQSTCDGADMRDERANETSDSAFSYSSEAVPEEYVVNFRAYYARDTAARIIARALRSRLAAGRFEAVRRHNAAEGMPSDFAVVKLFNVSGAETEVALAGMREYPLIKHVSAHKRISRSLLSFGSGGARALLARSARRLSFDAEAEADDDDAIRSNDKDGSETQGGRRLLGKTIQRPVSALLQADLLWTRGFTGKDIRVAIFDTGLREDHPHFRNVLDRTDWTDEATLDDNLGHGTFVAGVIASSRECLGLAPDADLFIFRVFTVNQVSYTSWFLDAFNYAIHKRVHVLNLSIGGPDFLDQPFVEKVWELTANGIIMVSAIGNDGPLYGTLNNPADQMDVIGVGGTDYDDNIAAFSSRGMTGWELPRGYGRVKPDIVTYGYQVGGSHKKSGCRTLSGTSVASPVVAGAVALLCSVIPAPLRPALSNPASIKQAIIESATRLDGPNMFEQGAGKLDLVKAYQVLSAYEARASAVPATLDLTSCPYAWPYCTQPLYYGAMPVTVNVTVLNGMGVSGWFSRAPTFTVSGENGAGVLDVRFMWSDVLWPWAGYLSVGIVVNERGLAFSGVISGSIDFEIRSAGKGRSWLTSRVSIPLTVRVIPTPGRHRRVLWDQFHNLRYPSGYFPRDNLRMKMDPLDWNGDHIHTNFKELYQALRERDYFVEVLGEPLTCFDARQYGTLIIADAEEEFHPLEIEKMRADVEDRGLSVLVLGEWYNADIMRDKIRFFDENTRQWWSPETGGANVPALNDLLDHFGIAMGDAVYEGQIAAGDDDVELMSSSSIVRFPTRGLVLVGELTNLGDEMVKGLSHKDRDVAVLGLYQTPEEEGGRIVVYTDSSCADSAHAKGNCFPFMGKLVEYAATGVLDSALARSCERLSERYDKGVDLPRRLATNLRQFSKVLDPNGVGFRALAACGANGTANSERRLAEDDSEAVDDLLQARRGWVQPALSGPREGEAGPNRRRDTGQSSAPWILFLAAIALLVAYSVYGRGRRRRVISIMPSV* # ORIGINAL: g8239.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 66706 67053 . - . ID=g8239;Name=g8239.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 66706 67053 . - . ID=g8239.t1;Parent=g8239;Name=g8239.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 66706 67053 . - . ID=g8239.t1.exon1;Parent=g8239.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 66706 67053 . - 0 ID=cds.g8239.t1;Parent=g8239.t1 #PROT g8239.t1 g8239 MATSGARAEWVRCGWDTECGGVLTWLASVDRDTRRHFLMRLVSRVVPSSAANDGLDSLLCGLAIKHRVACPEDAAVDAFDRWTDTQRNIFMNAVENIDAVAVNEFLERVSQLRWS* # ORIGINAL: g8236.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 60454 62434 . - . ID=g8236;Name=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 60454 62434 . - . ID=g8236.t1;Parent=g8236;Name=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 61466 62434 . - . ID=g8236.t1.exon1;Parent=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 61466 62434 . - 0 ID=cds.g8236.t1;Parent=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 61228 61375 . - . ID=g8236.t1.exon2;Parent=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 61228 61375 . - 0 ID=cds.g8236.t1;Parent=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 60454 61034 . - . ID=g8236.t1.exon3;Parent=g8236.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 60454 61034 . - 2 ID=cds.g8236.t1;Parent=g8236.t1 #PROT g8236.t1 g8236 MAPEIIDDREGHGMAVDWWSLGILLYELLTGRPPFNSEDDANNDQERIMHRIQRDDPALPPSRFSRESASLIRGLLQKDPRRRLGCGSRDAAEVKEHAFFRDISWDDARARRLQPPVRLVGGGDNPNDPDVSNFDEYFTTQEPVDSPAVMPGSSRNALFRGFSFVAPQAIASPVVDAHRLNLTRSFRAHVVQDAASKFNAKYALESDVLGVGAFATCLRCSERSTGLACAVKIVNRRASPGVEVEMLRRCQGHPNIIRLLDVIEDDSQLYMVLELMRGGELFDRIRQKRHFGEPEAAAIFGKVVSAVAFMHSRGVAHRDLKPENLLFQDDSASAEIKIVDFGFARALSEELPLKTPCFTLGYAAPEVIATTGATQPFPASSMDLVRRIRGGEYTFEGREWAIVSDSAKNLIAGLLNVTPSARLTAAMVLGHPWLQLHVAVQEDGGTEENAPDQIVGNLNNPIPDDFGGDDAATGAIRRTDACAPSAGINSVSLLRSEGSDLCLMSPGNLQASTGNGRAAVAATLTAFHKMRPRITLDQVASSPLAKRRRIGKLSSEDEGAPQHPQ* # PASA_UPDATE: g8216.t1, single gene model update, valid-1, status:[pasa:asmbl_1788,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 473 1549 . - . ID=g8216;Name=g8216.t1 NODE_14_length_67523_cov_40.9066 . mRNA 473 1549 . - . ID=g8216.t1;Parent=g8216;Name=g8216.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 1428 1549 . - . ID=g8216.t1.utr5p1;Parent=g8216.t1 NODE_14_length_67523_cov_40.9066 . exon 473 1549 . - . ID=g8216.t1.exon1;Parent=g8216.t1 NODE_14_length_67523_cov_40.9066 . CDS 528 1427 . - 0 ID=cds.g8216.t1;Parent=g8216.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 473 527 . - . ID=g8216.t1.utr3p1;Parent=g8216.t1 #PROT g8216.t1 g8216 MQRNMCARCVRTYAVCILIACTVVISSPLASADYGSGEYGRADASASQSDFYDRQSAAGAALNDRSYDSFASSDAQQSVLEEETDEERARRAPVIPFAAGYSVTGSVEPNSFVHYVLKSSSDLYIVVESLAGDADVYVRRRAKPTVFEFDFSSTSCGIETLNVTHLSGAQAGDEAADYYVSVYGHVSAIGVSRYLLRVDVVDATGYAAAEDANGGPQSNAYGSAERASNLRESLSRHAGTGHQTQQQHQQQQQQQQQQQQQQQQQQGQRRQANSKGARTETEVMSLWDVVVIILQALFA* # PASA_UPDATE: g8220.t1, single gene model update, valid-1, status:[pasa:asmbl_1792,status:3], valid-1 # PASA_UPDATE: g8220.t1.1.5b6be70a, single gene model update, valid-1, status:[pasa:asmbl_1793,status:3], valid-1 NODE_14_length_67523_cov_40.9066 . gene 10395 12832 . - . ID=g8220;Name=g8220.t1 NODE_14_length_67523_cov_40.9066 . mRNA 10395 12832 . - . ID=g8220.t1;Parent=g8220;Name=g8220.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 12782 12832 . - . ID=g8220.t1.utr5p1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 12403 12832 . - . ID=g8220.t1.exon1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 12403 12781 . - 0 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 12270 12320 . - . ID=g8220.t1.exon2;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 12270 12320 . - 2 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 12080 12171 . - . ID=g8220.t1.exon3;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 12080 12171 . - 2 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 11779 11880 . - . ID=g8220.t1.exon4;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 11779 11880 . - 0 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 11402 11675 . - . ID=g8220.t1.exon5;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 11402 11675 . - 0 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . exon 10395 11265 . - . ID=g8220.t1.exon6;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . CDS 11051 11265 . - 2 ID=cds.g8220.t1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 10395 11050 . - . ID=g8220.t1.utr3p1;Parent=g8220.t1 NODE_14_length_67523_cov_40.9066 . mRNA 10395 12832 . - . ID=g8220.t1.1.5b6be70a;Parent=g8220;Name=g8220.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 12782 12832 . - . ID=g8220.t1.1.5b6be70a.utr5p1;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . exon 12403 12832 . - . ID=g8220.t1.1.5b6be70a.exon1;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . CDS 12403 12781 . - 0 ID=cds.g8220.t1.1.5b6be70a;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . exon 12270 12320 . - . ID=g8220.t1.1.5b6be70a.exon2;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . CDS 12270 12320 . - 2 ID=cds.g8220.t1.1.5b6be70a;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . exon 12080 12171 . - . ID=g8220.t1.1.5b6be70a.exon3;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . CDS 12080 12171 . - 2 ID=cds.g8220.t1.1.5b6be70a;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . exon 11779 11880 . - . ID=g8220.t1.1.5b6be70a.exon4;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . CDS 11779 11880 . - 0 ID=cds.g8220.t1.1.5b6be70a;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . exon 10395 11675 . - . ID=g8220.t1.1.5b6be70a.exon5;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . CDS 11235 11675 . - 0 ID=cds.g8220.t1.1.5b6be70a;Parent=g8220.t1.1.5b6be70a NODE_14_length_67523_cov_40.9066 . three_prime_UTR 10395 11234 . - . ID=g8220.t1.1.5b6be70a.utr3p1;Parent=g8220.t1.1.5b6be70a #PROT g8220.t1 g8220 MRPDDNKYKDNARKRNQQNAKRRDAARSGGAASPAEAHAHARSAHATQNRRDMDVRKGTVGVHPRGGLGGGGKGEGSKNDADQDAKGGTDSASAAEANDADDAEDARTYFGRRAISSNWERYEKVEADSEDKPLDFRAAVQTAGHKERTSDDHFRFKDEKEWQARPLMLSDAPPSVLEFLSIDCDRIADALLAVPFHRRVGLPRAAFDGRVVAFYDDDAAFHARSIEAMEKIAPTAPLTLQSQNSTSAAATPAAVRDGPPRKKSDPTDVRANAPATPTHAREDTISAHDIDLDDLLGNGGPSTALLHAHDDLIADSAPPLETDVGSATPEMDDTCTPTAAAAAAAAAPTPAPAHTKPPPSLDDWLDSMLD* #PROT g8220.t1.1.5b6be70a g8220 MRPDDNKYKDNARKRNQQNAKRRDAARSGGAASPAEAHAHARSAHATQNRRDMDVRKGTVGVHPRGGLGGGGKGEGSKNDADQDAKGGTDSASAAEANDADDAEDARTYFGRRAISSNWERYEKVEADSEDKPLDFRAAVQTAGHKERTSDDHFRFKDEKEWQARPLMLSDAPPSVLEFLSIDCDRIADALLAVPFHRRVGLPRAAFDGRVVAFYDDDAAFHARSIEAMEKIAPTAPLTLQSQNSTSAAATPAAVRDGPPRKKSDPTDVRANAPATPTHAREDTISAHDIDLDDLLGNGGECVAHVRQIRHGCAPEKHSFRGYHQTETHSDFRYPASLLCTLHRRSFYCAFACP* # ORIGINAL: g8219.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 9542 10952 . + . ID=g8219;Name=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 9542 10952 . + . ID=g8219.t1;Parent=g8219;Name=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 9542 9625 . + . ID=g8219.t1.exon1;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 9542 9625 . + 0 ID=cds.g8219.t1;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 9739 10121 . + . ID=g8219.t1.exon2;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 9739 10121 . + 0 ID=cds.g8219.t1;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 10237 10328 . + . ID=g8219.t1.exon3;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 10237 10328 . + 1 ID=cds.g8219.t1;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 10535 10626 . + . ID=g8219.t1.exon4;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 10535 10626 . + 2 ID=cds.g8219.t1;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 10803 10952 . + . ID=g8219.t1.exon5;Parent=g8219.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 10803 10952 . + 0 ID=cds.g8219.t1;Parent=g8219.t1 #PROT g8219.t1 g8219 MEGDGETTAADEQFEAGLRMIRQGFRQKVSEKNSEIAKLQSAVAERDATISGQQRRIELLEQELARANQALKRVSTDVSKLSAFKQAIISVFDESELSAEASRRVEGKYGGTPGGTPGLSMQSGLGGSPTLGGAGVQFSPVKRRLDDTHGHNGEYGDLLESSIGLSHGGMAGGNSSTPRNQYLSAKRAASPTLSTASTAGESKDFFRVVKSRLQADDFDDFMHNIKSLNAGSQTKSVTIANVRGIFGERHADLVDGFERLLSRKHS* # PASA_UPDATE: g8215.t1, single gene model update, valid-1, status:[pasa:asmbl_1787,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 167 421 . + . ID=g8215;Name=g8215.t1 NODE_14_length_67523_cov_40.9066 . mRNA 167 421 . + . ID=g8215.t1;Parent=g8215;Name=g8215.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 167 167 . + . ID=g8215.t1.utr5p1;Parent=g8215.t1 NODE_14_length_67523_cov_40.9066 . exon 167 421 . + . ID=g8215.t1.exon1;Parent=g8215.t1 NODE_14_length_67523_cov_40.9066 . CDS 168 302 . + 0 ID=cds.g8215.t1;Parent=g8215.t1;5_prime_partial=true NODE_14_length_67523_cov_40.9066 . three_prime_UTR 303 421 . + . ID=g8215.t1.utr3p1;Parent=g8215.t1 #PROT g8215.t1 g8215 RGHPLSLNDQRYAQLNRMWLSHAIPTDIARALEASPSNIDWTNF* # PASA_UPDATE: g8235.t1, single gene model update, valid-1, status:[pasa:asmbl_1785,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 58705 60407 . + . ID=g8235;Name=g8235.t1 NODE_14_length_67523_cov_40.9066 . mRNA 58705 60407 . + . ID=g8235.t1;Parent=g8235;Name=g8235.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 58705 58732 . + . ID=g8235.t1.utr5p1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 58705 58769 . + . ID=g8235.t1.exon1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 58733 58769 . + 0 ID=cds.g8235.t1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 58850 59019 . + . ID=g8235.t1.exon2;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 58850 59019 . + 2 ID=cds.g8235.t1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 59116 59220 . + . ID=g8235.t1.exon3;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 59116 59220 . + 0 ID=cds.g8235.t1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 59325 59419 . + . ID=g8235.t1.exon4;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 59325 59419 . + 0 ID=cds.g8235.t1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 60062 60158 . + . ID=g8235.t1.exon5;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 60062 60158 . + 1 ID=cds.g8235.t1;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . exon 60270 60407 . + . ID=g8235.t1.exon6;Parent=g8235.t1 NODE_14_length_67523_cov_40.9066 . CDS 60270 60407 . + 0 ID=cds.g8235.t1;Parent=g8235.t1 #PROT g8235.t1 g8235 MAYQPQTQPSFAAVHHRGGVPQPYGSEYGANANAYGGPGGQFFQDPVATAAFAYGTTMAASGKDYVEKNIEKLISRGKLKFYFNVSNSYVLSKLKLILMPLGHKNWARQIFNGQGGAEYAPPRDDINAPDLYIPGIIIISMLVGLVTGNSGAYFAALAWTSLAVSYFLIKSLRLVILPEGSAGGHPAKGQLKNYFLLLVAFSQVLLSYLFSRV* # PASA_UPDATE: g8230.t1, single gene model update, valid-1, status:[pasa:asmbl_1783,status:3], valid-1 NODE_14_length_67523_cov_40.9066 . gene 37925 40154 . + . ID=g8230;Name=g8230.t1 NODE_14_length_67523_cov_40.9066 . mRNA 37925 40154 . + . ID=g8230.t1;Parent=g8230;Name=g8230.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 37925 37981 . + . ID=g8230.t1.utr5p1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 37925 38123 . + . ID=g8230.t1.exon1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 37982 38123 . + 0 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 38269 38340 . + . ID=g8230.t1.exon2;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 38269 38340 . + 2 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 38444 38607 . + . ID=g8230.t1.exon3;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 38444 38607 . + 2 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 38701 38919 . + . ID=g8230.t1.exon4;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 38701 38919 . + 0 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 39082 39177 . + . ID=g8230.t1.exon5;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 39082 39177 . + 0 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 39262 39402 . + . ID=g8230.t1.exon6;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 39262 39402 . + 0 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 39530 39623 . + . ID=g8230.t1.exon7;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 39530 39623 . + 0 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . exon 39776 40154 . + . ID=g8230.t1.exon8;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . CDS 39776 40137 . + 2 ID=cds.g8230.t1;Parent=g8230.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 40138 40154 . + . ID=g8230.t1.utr3p1;Parent=g8230.t1 #PROT g8230.t1 g8230 MAGEEALSAVETVVACDTLAQTQASASTERTPRQIGTKMLVKWKDAWRQAEILEVRQTEGDRFDYYVHYIGYNRRLDEWVAEDRVDVDSAESALKPSVQESEEPATERKLTRHMKRKHDEMNHVQKSYEEMDPTTAALEKEYEAVTKVKYVNKIQLGMYEIDTWYFAPYPDEYGRLPRLFICQYCAKYMKYARTYAEHTAKCSPRHPPGIEIYISGSDRIAVTEVDGSTAKVFCQNLCLLAKLFLDHKTLYFDVEPFIFYVLTEVHLDGHHIVGFFSKEKRSLEGNNVACIMTLPPHQRKGYGKFLIAFSYELSKIEGVVGSPEKPLSDLGKLSYRSYWTWVLLEILREKRGPLSIREISHLTSITTEDIVETLQSLNLVRYWKGQHVICVTPKLIEEHTASPLFKRPRLTVDRALIRWTPPVFEPLQK* # PASA_UPDATE: g8229.t1, single gene model update, valid-1, status:[pasa:asmbl_1795,status:3], valid-1 NODE_14_length_67523_cov_40.9066 . gene 36678 37743 . - . ID=g8229;Name=g8229.t1 NODE_14_length_67523_cov_40.9066 . mRNA 36678 37743 . - . ID=g8229.t1;Parent=g8229;Name=g8229.t1 NODE_14_length_67523_cov_40.9066 . five_prime_UTR 37661 37743 . - . ID=g8229.t1.utr5p1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . exon 37596 37743 . - . ID=g8229.t1.exon1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . CDS 37596 37660 . - 0 ID=cds.g8229.t1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . exon 37379 37489 . - . ID=g8229.t1.exon2;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . CDS 37379 37489 . - 1 ID=cds.g8229.t1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . exon 37102 37264 . - . ID=g8229.t1.exon3;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . CDS 37102 37264 . - 1 ID=cds.g8229.t1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . exon 36933 37013 . - . ID=g8229.t1.exon4;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . CDS 36933 37013 . - 0 ID=cds.g8229.t1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . exon 36678 36828 . - . ID=g8229.t1.exon5;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . CDS 36694 36828 . - 0 ID=cds.g8229.t1;Parent=g8229.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 36678 36693 . - . ID=g8229.t1.utr3p1;Parent=g8229.t1 #PROT g8229.t1 g8229 MGLLTVLKKVKQKERELRLLMLGLDNAGKTTILKRINGEDINTISPTLGFNISTIEHKGFKLNVWDVGGQKSLRSYWRNYFECTDGLVWVVDSADRRRLEDCRSELHALLKEERLAGASLLVFANKQDISGALSHDQIREVLELDAIKTHHWHIFRCSAVTGENLLEGVDWIVEDIASRVFMMD* # ORIGINAL: g8228.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 33134 36285 . - . ID=g8228;Name=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 33134 36285 . - . ID=g8228.t1;Parent=g8228;Name=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 36219 36285 . - . ID=g8228.t1.exon1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 36219 36285 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 36023 36126 . - . ID=g8228.t1.exon2;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 36023 36126 . - 2 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 35732 35929 . - . ID=g8228.t1.exon3;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 35732 35929 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 35581 35642 . - . ID=g8228.t1.exon4;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 35581 35642 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 35313 35417 . - . ID=g8228.t1.exon5;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 35313 35417 . - 1 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 35075 35225 . - . ID=g8228.t1.exon6;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 35075 35225 . - 1 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 34820 34955 . - . ID=g8228.t1.exon7;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 34820 34955 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 34625 34724 . - . ID=g8228.t1.exon8;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 34625 34724 . - 2 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 34378 34531 . - . ID=g8228.t1.exon9;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 34378 34531 . - 1 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 34072 34222 . - . ID=g8228.t1.exon10;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 34072 34222 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 33826 33920 . - . ID=g8228.t1.exon11;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 33826 33920 . - 2 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 33579 33677 . - . ID=g8228.t1.exon12;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 33579 33677 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 33371 33478 . - . ID=g8228.t1.exon13;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 33371 33478 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 33134 33262 . - . ID=g8228.t1.exon14;Parent=g8228.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 33134 33262 . - 0 ID=cds.g8228.t1;Parent=g8228.t1 #PROT g8228.t1 g8228 MDTPISVRHKKSKRLGHGEPKKVAPGNGKAKAKDATITPEIRQKLKKYKRGESNTLKGLADRKLKGNLRKTERYIKEAEIRAAEMEILHTEDAGALEAEGMERTYKFTQSQIAAHVDISSAKKIFDLKLDKYGPYRLDYTRNGKYMLIGGEKGHVATFDWRAGKLGCELFLQETVRDVKWLHNETMFAVAQKKYLYIYDNNGVEVHCLRGHAEPTRIEFLPYHYLLMSVGAGGVLKYQDVSTGQLVAEHKSRLGPCHTLAQNPHNAVALLGHANGTVTMWTPNISTPVVKMLCHRGPVQAVAVDTSGRHMVTSGADGQVKVYDVRTYKELQAYYTPTPATSLDISQQGLVAVGFGPHVQVWKDAFATKQPSPYMTHLIPSSMVDDVRFCPFEDVLGIGHRMGLSSIVVPGAGEANFDSLENNPFQTKKQRQEGEVKSLLEKIQPAMITLDPNQIGSVSRARSDELAEERRLEFEANNPGLKYEPKYRARGKSSSQRRYMRKQTNVVDEKRIAMRERLEKATAERENKERRRDGQSADERAPRAALDRFAPRR* # PASA_UPDATE: g8222.t1, single gene model update, valid-1, status:[pasa:asmbl_1794,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 15255 16570 . - . ID=g8222;Name=g8222.t1 NODE_14_length_67523_cov_40.9066 . mRNA 15255 16570 . - . ID=g8222.t1;Parent=g8222;Name=g8222.t1 NODE_14_length_67523_cov_40.9066 . exon 16534 16570 . - . ID=g8222.t1.exon1;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . CDS 16534 16570 . - 0 ID=cds.g8222.t1;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . exon 15506 15702 . - . ID=g8222.t1.exon2;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . CDS 15506 15702 . - 2 ID=cds.g8222.t1;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . exon 15255 15327 . - . ID=g8222.t1.exon3;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . CDS 15319 15327 . - 0 ID=cds.g8222.t1;Parent=g8222.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 15255 15318 . - . ID=g8222.t1.utr3p1;Parent=g8222.t1 #PROT g8222.t1 g8222 MPPKIDPNEIKIVKHTGNLTLDEIIEIARVMRERSMARTLSGTIREILGTAQSVGCTVDGVPAHDVIDGIKAGTIAVPEK* # ORIGINAL: g8221.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 13683 14748 . + . ID=g8221;Name=g8221.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 13683 14748 . + . ID=g8221.t1;Parent=g8221;Name=g8221.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 13683 14303 . + . ID=g8221.t1.exon1;Parent=g8221.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 13683 14303 . + 0 ID=cds.g8221.t1;Parent=g8221.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 14437 14748 . + . ID=g8221.t1.exon2;Parent=g8221.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 14437 14748 . + 0 ID=cds.g8221.t1;Parent=g8221.t1 #PROT g8221.t1 g8221 MAERGLAVMQDELAVEDIDGDVGECVVTLPSAVEDAPDALRSARPPTMNARSVHSLRLHAAEAEETNEPHVHSLPNGCVSISMPDVHTKVTDELAPSGFAVGGSIHPCNAVGMGVPRPIVRACTLVSDSIMSVPYSEADDAGCRICRASDETKRLFSPCLCSGSVGLVHEECLKQWLDVSKKKTEDMKCEICHYQYVIKFTTKPFKQWKRISVSQSESRRLKIYLASYIVAGFTLSWTVSSFLIPLLGADSKNFAFYFKLFLMIFCWVVWAVLFYLHGKFYAVLIRKLKMHNRAVVIMPHHIEPAPPTKR* # PASA_UPDATE: g8223.t1, single gene model update, valid-1, status:[pasa:asmbl_1781,status:12], valid-1 NODE_14_length_67523_cov_40.9066 . gene 17229 22106 . + . ID=g8223;Name=g8223.t1 NODE_14_length_67523_cov_40.9066 . mRNA 17229 22106 . + . ID=g8223.t1;Parent=g8223;Name=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 17229 17267 . + . ID=g8223.t1.exon1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 17229 17267 . + 0 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 17354 18130 . + . ID=g8223.t1.exon2;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 17354 18130 . + 0 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 18307 20470 . + . ID=g8223.t1.exon3;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 18307 20470 . + 0 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 20822 21306 . + . ID=g8223.t1.exon4;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 20822 21306 . + 2 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 21444 21644 . + . ID=g8223.t1.exon5;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 21444 21644 . + 0 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . exon 21781 22106 . + . ID=g8223.t1.exon6;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . CDS 21781 22032 . + 0 ID=cds.g8223.t1;Parent=g8223.t1 NODE_14_length_67523_cov_40.9066 . three_prime_UTR 22033 22106 . + . ID=g8223.t1.utr3p1;Parent=g8223.t1 #PROT g8223.t1 g8223 MEFPKEGSIRVHKPDLSAFNVVKCTLSTTVADLGGTLFLSTSNGCERPLPPTAHPLELHYEMLLRLGFTAGQLAQVGGDDHSYYFRFLSGRQSGAAGGGHVESASVRGVLLKEGHALIKKWEKRNCEIVGSRLKYYAPGSTEVKGVIELVGCRFEEVPTKRDLCFLVQPAGANKAFYFCAETKVEYKKWTTRVKAASQMNPNILDLVGQSLTSVSAEYHNIAGTANLVNLTRNFFSSVASLAPFRAMVTVIISENELRAVPDGLFELPQLEELDLSRNLISEIPRDIARLTRLRTLAVHANRLSKLPEEIGGLALQTLVIAFNKFTDLPSFLTRIRTLKSIIATGNLIYKLPEDIGNLEALERLEVGHNRLSSLPESVGRLGSLTKLDARSNMFTEYPRQIAKLAKLATVDLTHCSMQGEVVAAMESATALSFQENSISSFSFGGIVAQLVTKINLSHNNLIELPDAVCDLPALESLVLKGNKLRSLPERIFNIPSLKWLFVGDNCIEQLPQKVGKCRIQIMELQRNKISALPPRLFELSYMLRVLNVSDNNLADLPPFAEAQINGLEELYLAKNQLGTEVLKRALSSPKLRIIAMNYNNVDAIPSNIGHCEGLEGLHLAGNRIQSIPDSISRLKKLVYLMLAGNQIVSVKALPTDPSLASVDLSCNRIREPPQCLLRCSGIENIDLSGNASLRVNWASWDPRPLQKLRRVSLEGLSPGAVPAPPKELASIVEHVSVAMKSQWHYGSAEILGRRPRMEDSRILMPGFGGNDGSALFAVFDGHSGPDVAVQLEKSYAGILAEELRLSGGDGERALYASFLQAHRSLGAISRRCGSTGVVVYANSEGSKTHSFVANVGDSEFVVTRADGTTAVLSTKHKASTLSERERISMSGGFLGEEDRVCGVLATSRCLGDTYMHPFVTPLPAIAQTYIAADDRFAVMACDGLWDVLTYEDAAKEVEAAGRDPVLASRRLRDLAYAFGSEDNITVMVISFVPFERKPDPDFVPEAVQESDAPPLQSSNFMADYSFVRVLGEGSFGKVVLAKHKDKFVAVKILSRASATAEEVDIEKSMAKLQHPSLVCLRAHHESPRRIYLVMEFVGGGTFSVPDKPEDAFPEKRARFYGAQISLGLKFLHKNGIIYRDMSLHNLLLDSHGNVKIADFGLSSSGLSSKEFCGTPAFMAPEMVRKQTYNKAVDWWGVGVVLYMMLVGRPPFFSDNIADLNDQIIGRDPYYPHALNKPAREFLKALLQRDPAARLGSTADEEDVIKHPFFKGVEWAKLESGSASPPVKPDVKKIEPQNPSDFEGWI* # ORIGINAL: g8233.t1 original gene structure, not modified by PASA NODE_14_length_67523_cov_40.9066 AUGUSTUS gene 52910 54069 . + . ID=g8233;Name=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS mRNA 52910 54069 . + . ID=g8233.t1;Parent=g8233;Name=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 52910 52993 . + . ID=g8233.t1.exon1;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 52910 52993 . + 0 ID=cds.g8233.t1;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 53389 53547 . + . ID=g8233.t1.exon2;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 53389 53547 . + 0 ID=cds.g8233.t1;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 53716 53818 . + . ID=g8233.t1.exon3;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 53716 53818 . + 0 ID=cds.g8233.t1;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS exon 53933 54069 . + . ID=g8233.t1.exon4;Parent=g8233.t1 NODE_14_length_67523_cov_40.9066 AUGUSTUS CDS 53933 54069 . + 2 ID=cds.g8233.t1;Parent=g8233.t1 #PROT g8233.t1 g8233 MEVLLFEAPLADENNLCVKNAPCDLDVEFPVLIDSDVNEFPQVSRVKRSCAPAPFALPLFKCIDLANHFFGFNGWSCEVVECSVRVFVAGFDGCAQGTGAVTTMHAAKCIGESSPAASLASQRAFGCIAIVRRTSHPVSVRFFDRAVSHHPAPDGECPAL* # ORIGINAL: g3861.t1 original gene structure, not modified by PASA NODE_1855_length_8891_cov_61.5842 AUGUSTUS gene 87 587 . + . ID=g3861;Name=g3861.t1 NODE_1855_length_8891_cov_61.5842 AUGUSTUS mRNA 87 587 . + . ID=g3861.t1;Parent=g3861;Name=g3861.t1 NODE_1855_length_8891_cov_61.5842 AUGUSTUS exon 87 160 . + . ID=g3861.t1.exon1;Parent=g3861.t1 NODE_1855_length_8891_cov_61.5842 AUGUSTUS CDS 87 160 . + 0 ID=cds.g3861.t1;Parent=g3861.t1 NODE_1855_length_8891_cov_61.5842 AUGUSTUS exon 503 587 . + . ID=g3861.t1.exon2;Parent=g3861.t1 NODE_1855_length_8891_cov_61.5842 AUGUSTUS CDS 503 587 . + 1 ID=cds.g3861.t1;Parent=g3861.t1 #PROT g3861.t1 g3861 ISSLVAVRLVTQVSAQDNLDGIRYRCNAGLEMVQAVSRSASFDLQRYLYVHE* # PASA_UPDATE: g3862.t1, single gene model update, valid-1, status:[pasa:asmbl_2817,status:3], valid-1 NODE_1855_length_8891_cov_61.5842 . gene 2899 4042 . + . ID=g3862;Name=g3862.t1 NODE_1855_length_8891_cov_61.5842 . mRNA 2899 4042 . + . ID=g3862.t1;Parent=g3862;Name=g3862.t1 NODE_1855_length_8891_cov_61.5842 . five_prime_UTR 2899 3027 . + . ID=g3862.t1.utr5p1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . exon 2899 3114 . + . ID=g3862.t1.exon1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . CDS 3028 3114 . + 0 ID=cds.g3862.t1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . exon 3224 3335 . + . ID=g3862.t1.exon2;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . CDS 3224 3335 . + 0 ID=cds.g3862.t1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . exon 3466 3529 . + . ID=g3862.t1.exon3;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . CDS 3466 3529 . + 2 ID=cds.g3862.t1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . exon 3704 4042 . + . ID=g3862.t1.exon4;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . CDS 3704 3830 . + 1 ID=cds.g3862.t1;Parent=g3862.t1 NODE_1855_length_8891_cov_61.5842 . three_prime_UTR 3831 4042 . + . ID=g3862.t1.utr3p1;Parent=g3862.t1 #PROT g3862.t1 g3862 MAVDGAAGPGSPPATASASASAVTGADGKPHPELKIDISRIPCARDAYLNGIVSGTIAGVVRFFMTWNGIKGGNAAVFTFAGVSIVSWHFCRYQRERNARLLKEGLEKMNQAAKRPPPAGAVGGEDNPR* # PASA_UPDATE: g3863.t1, single gene model update, valid-1, status:[pasa:asmbl_2819,status:12], valid-1 NODE_1855_length_8891_cov_61.5842 . gene 5502 8573 . + . ID=g3863;Name=g3863.t1 NODE_1855_length_8891_cov_61.5842 . mRNA 5502 8573 . + . ID=g3863.t1;Parent=g3863;Name=g3863.t1 NODE_1855_length_8891_cov_61.5842 . five_prime_UTR 5502 5772 . + . ID=g3863.t1.utr5p1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 5502 5796 . + . ID=g3863.t1.exon1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 5773 5796 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 5999 6130 . + . ID=g3863.t1.exon2;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 5999 6130 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 6397 6581 . + . ID=g3863.t1.exon3;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 6397 6581 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 6761 7031 . + . ID=g3863.t1.exon4;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 6761 7031 . + 1 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 7337 7468 . + . ID=g3863.t1.exon5;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 7337 7468 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 7692 7825 . + . ID=g3863.t1.exon6;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 7692 7825 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 8017 8143 . + . ID=g3863.t1.exon7;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 8017 8143 . + 1 ID=cds.g3863.t1;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . exon 8295 8573 . + . ID=g3863.t1.exon8;Parent=g3863.t1 NODE_1855_length_8891_cov_61.5842 . CDS 8295 8573 . + 0 ID=cds.g3863.t1;Parent=g3863.t1 #PROT g3863.t1 g3863 MADAAPMQVDAPIRHDDVPLFPGAQTQAQPGVRKQQLRTISSSLHEVTQPNLDLDTYISNYTGHTKIVRLLFIARHCPSLRLEAYKMAIAEVQKTSNTTLYLEISQKLQELLHQSGDGETFTADQAWIDSVDKRATQLQEKLDLDIKGYRNKTIKEGIRVGQNDLGDFFYDRGELENALRCYSRARDYCTTAKHIVAMCLNVIKVSVELENWGFVNAYVTKAEMTPDVSEDPTIVARLKCCLGLHTLQEGKYKNAARHFLETTFDLGSTFSDVIAPQDVAVYGGLCALASYDRGELKRKVIDSQPFKQFLELVPEVREIIHDFYASRYASMLKHMATLKEDLLLDIHLHDHVTALYKDIRNKALVQYCSPFLTVDLRSMADAFGTSVAGLEKELSVLIMDSLIPARIDSHNKVSLLVCSLVVLELSR* # PASA_UPDATE: g4883.t1, single gene model update, valid-1, status:[pasa:asmbl_9005,status:12], valid-1 NODE_713_length_18744_cov_41.3585 . gene 1051 4071 . + . ID=g4883;Name=g4883.t1 NODE_713_length_18744_cov_41.3585 . mRNA 1051 4071 . + . ID=g4883.t1;Parent=g4883;Name=g4883.t1 NODE_713_length_18744_cov_41.3585 . exon 1051 1239 . + . ID=g4883.t1.exon1;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . CDS 1051 1239 . + 0 ID=cds.g4883.t1;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . exon 1554 3227 . + . ID=g4883.t1.exon2;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . CDS 1554 3227 . + 0 ID=cds.g4883.t1;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . exon 3377 4071 . + . ID=g4883.t1.exon3;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . CDS 3377 3493 . + 0 ID=cds.g4883.t1;Parent=g4883.t1 NODE_713_length_18744_cov_41.3585 . three_prime_UTR 3494 4071 . + . ID=g4883.t1.utr3p1;Parent=g4883.t1 #PROT g4883.t1 g4883 MSALKQRLLARLQRRCCGSCAGLLYHVTDAVVVLRLPASAASWAECGPPAPKPRLFGPAPALGAAQIAATLAERHAGHYMIYNMSGVALGNHHFGDAVVDFNLARHQQLPDGPTPPVDALAALCRSAQSWLSADARNVAVVCAPTRLASIVTACVLAYCGFLQPSEDGEVAAFFRAEAMRKSVDKGDDRQHSPSVRAAEERRTHAVQMRFLRDWTSLLVRRGREFGIRENDSPAYILKRIGIVSRGRDAIPAGWKPVAMVMRDVTVVYSSIAAPRNVHISAGHRGMREHAADASGGGDGEIDDYSVSFDIDVRVCGDHLMRFYCMPLTGGPGQPVCSVAFHTAFVDEMGLTLRAAFEEADDVRALPGIAQIPAYDIVLHFEPAEKQTSTVTAVHSGAHNDGSAHEHEIGAEEATGAARGRTHDEDEAMARALQAAFDVESRAEAALRAIDDARAAIDPALDRMRTTLPSAANAEGAAVLPNNSDDFGADADEALARELQRQYDDELRAMRVSEGLPPPIDATLEMAAAVERMRADEELARRLQDALSLSDMLINASPASFRRASLPGSLGARAAAVRSSRLAQGFRRHSASTATISMLPVTTYRGGGPAGEECQICRSAYEMGDSLRTLPCFHRYHAECVDHWLSQKATCPVCLTRVDG* # ORIGINAL: g4882.t1 original gene structure, not modified by PASA NODE_713_length_18744_cov_41.3585 AUGUSTUS gene 94 216 . - . ID=g4882;Name=g4882.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS mRNA 94 216 . - . ID=g4882.t1;Parent=g4882;Name=g4882.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 94 216 . - . ID=g4882.t1.exon1;Parent=g4882.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 94 216 . - 0 ID=cds.g4882.t1;Parent=g4882.t1 #PROT g4882.t1 g4882 MAENERSAMQGGGGTTAQADGRFASLCASYGTYPAVNVADE # PASA_UPDATE: g4889.t1, single gene model update, valid-1, status:[pasa:asmbl_9006,status:12], valid-1 NODE_713_length_18744_cov_41.3585 . gene 17516 18526 . + . ID=g4889;Name=g4889.t1 NODE_713_length_18744_cov_41.3585 . mRNA 17516 18526 . + . ID=g4889.t1;Parent=g4889;Name=g4889.t1 NODE_713_length_18744_cov_41.3585 . five_prime_UTR 17516 17592 . + . ID=g4889.t1.utr5p1;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . exon 17516 17757 . + . ID=g4889.t1.exon1;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . CDS 17593 17757 . + 0 ID=cds.g4889.t1;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . exon 18020 18094 . + . ID=g4889.t1.exon2;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . CDS 18020 18094 . + 0 ID=cds.g4889.t1;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . exon 18214 18526 . + . ID=g4889.t1.exon3;Parent=g4889.t1 NODE_713_length_18744_cov_41.3585 . CDS 18214 18526 . + 0 ID=cds.g4889.t1;Parent=g4889.t1;3_prime_partial=true #PROT g4889.t1 g4889 MSVIELTSESHLATLGAGGALLVAHFAAAWCEPCMQVTDVLNDLAKQYPGAVFVKIEAENFPTISEKYEIVAVPTLVFIKGGAAIDRVDGVNVPAIAKKVAEHSPAASTAAATPSDASASAGDAKAALTERLKKLTTAARVMLFMKGTPDTPRCGFSRQIVDILKQHKTDFSAFDILSDDEVRQ # ORIGINAL: g4888.t1 original gene structure, not modified by PASA NODE_713_length_18744_cov_41.3585 AUGUSTUS gene 16230 17111 . + . ID=g4888;Name=g4888.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS mRNA 16230 17111 . + . ID=g4888.t1;Parent=g4888;Name=g4888.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 16230 16329 . + . ID=g4888.t1.exon1;Parent=g4888.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 16230 16329 . + 0 ID=cds.g4888.t1;Parent=g4888.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 16477 17111 . + . ID=g4888.t1.exon2;Parent=g4888.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 16477 17111 . + 2 ID=cds.g4888.t1;Parent=g4888.t1 #PROT g4888.t1 g4888 MPPVQITNVTFATEMGAEPLSEKCHVRRPGVTAVVALARCNRLKTTEPGSLGDPLSATVSIVAVTGLVVSLYARVMLSGRPFAAKEVMRITPWSTDADADAAAEDPHTLSESAEGIKSKAYVALSVCSQATAPSPWKSTLPAQSVAITSQALQDETGVHVKLNRQRPRQRAYCCLCAAGQRQHVDGHCKNKSHECVGCPCCMQFISAAQEGTPEGAWRARVDVQVERSAESTLSHPWLTMCHRE* # ORIGINAL: g4884.t1 original gene structure, not modified by PASA NODE_713_length_18744_cov_41.3585 AUGUSTUS gene 3905 5792 . - . ID=g4884;Name=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS mRNA 3905 5792 . - . ID=g4884.t1;Parent=g4884;Name=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 5737 5792 . - . ID=g4884.t1.exon1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 5737 5792 . - 0 ID=cds.g4884.t1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 5528 5633 . - . ID=g4884.t1.exon2;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 5528 5633 . - 1 ID=cds.g4884.t1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 5116 5333 . - . ID=g4884.t1.exon3;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 5116 5333 . - 0 ID=cds.g4884.t1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 4683 4844 . - . ID=g4884.t1.exon4;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 4683 4844 . - 1 ID=cds.g4884.t1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 4151 4552 . - . ID=g4884.t1.exon5;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 4151 4552 . - 1 ID=cds.g4884.t1;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 3905 3965 . - . ID=g4884.t1.exon6;Parent=g4884.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 3905 3965 . - 1 ID=cds.g4884.t1;Parent=g4884.t1 #PROT g4884.t1 g4884 MFHTATPIVRIEIPRLPDMTRVVHAEDDVEREDVARARYHPSAPLRVSESVSGKARIAVTGPRWKVAAPMVPTFEVASNVASRSESASGCSIAQDHDGSASESYRHADGDNGYGIGVMQSLVNRRVMFRYAEPRPPSSRQRLRQHSRPCGDAKDALPHDETDDVAAAAAATNECADGLLESLAHRLDGSGGRCLAPQPAPTVQARARRAPASSGEDRDHKGMAGVHSDVLVRWRAERRARLAANQSRNPAIGRASQRAEVERNARPAHQAHAATAEPPARMSKQRDDVTLSSVCRCPVCALTAGDIVDHLVEKVGLLEPISSAMLHSARLRRLK* # ORIGINAL: g4887.t1 original gene structure, not modified by PASA NODE_713_length_18744_cov_41.3585 AUGUSTUS gene 15338 15544 . + . ID=g4887;Name=g4887.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS mRNA 15338 15544 . + . ID=g4887.t1;Parent=g4887;Name=g4887.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 15338 15544 . + . ID=g4887.t1.exon1;Parent=g4887.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 15338 15544 . + 0 ID=cds.g4887.t1;Parent=g4887.t1 #PROT g4887.t1 g4887 MAPPNLDAHPKNSALVAGRTAKCKAATQPPLESALALMNERLRPRTALSSASKILPEPAMTLSGGRCS* # PASA_UPDATE: g4885.t1, single gene model update, valid-1, status:[pasa:asmbl_9007,status:12], valid-1 NODE_713_length_18744_cov_41.3585 . gene 6750 9911 . - . ID=g4885;Name=g4885.t1 NODE_713_length_18744_cov_41.3585 . mRNA 6750 9911 . - . ID=g4885.t1;Parent=g4885;Name=g4885.t1 NODE_713_length_18744_cov_41.3585 . five_prime_UTR 9827 9911 . - . ID=g4885.t1.utr5p1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 9797 9911 . - . ID=g4885.t1.exon1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 9797 9826 . - 0 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 9054 9286 . - . ID=g4885.t1.exon2;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 9054 9286 . - 0 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 8828 8886 . - . ID=g4885.t1.exon3;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 8828 8886 . - 1 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 8701 8741 . - . ID=g4885.t1.exon4;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 8701 8741 . - 2 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 8331 8399 . - . ID=g4885.t1.exon5;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 8331 8399 . - 0 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 7931 8135 . - . ID=g4885.t1.exon6;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 7931 8135 . - 0 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 7583 7738 . - . ID=g4885.t1.exon7;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 7583 7738 . - 2 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . exon 6750 7378 . - . ID=g4885.t1.exon8;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . CDS 6975 7378 . - 2 ID=cds.g4885.t1;Parent=g4885.t1 NODE_713_length_18744_cov_41.3585 . three_prime_UTR 6750 6974 . - . ID=g4885.t1.utr3p1;Parent=g4885.t1 #PROT g4885.t1 g4885 MGSIIARLRRPKPIETELDEIARAIEMHEERQRESRLQEKRLVGLLLVYSSIFFIAVVAVFYLHFLPQLHGGADRLTAFALLVAIPVTIYGLKRVVQIFFVRRISSEALKLEQLRRKKKQKIDEYKKMTSFETIKAILEKYDPKEAPPNPQPAPDAGKGRPPGVPGPQSLQGRPTPAQGGAFHPGPQGPQGPQGPQGRLPPNAFAPGGPGASRLVRPITPANRTAFDRIVDYVVGDGPSNRYALICRHCGCHNGMALEEEFQYIAFRCAYCAGPNPARKARPQSPVAPMMASQAPVNDSTTGAHGTSDGPVAGDSPQEMDTRESDGPCVPASTGDTAAADVRSTAARRRVNAREDGQSGASVASGEERVGSGDDASGGDAAGAEHTPRRSLRKSAKAD* # ORIGINAL: g4886.t1 original gene structure, not modified by PASA NODE_713_length_18744_cov_41.3585 AUGUSTUS gene 10255 13814 . + . ID=g4886;Name=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS mRNA 10255 13814 . + . ID=g4886.t1;Parent=g4886;Name=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 10255 10315 . + . ID=g4886.t1.exon1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 10255 10315 . + 0 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 10450 10652 . + . ID=g4886.t1.exon2;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 10450 10652 . + 2 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 10822 12624 . + . ID=g4886.t1.exon3;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 10822 12624 . + 0 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 12785 12841 . + . ID=g4886.t1.exon4;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 12785 12841 . + 0 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 12949 13304 . + . ID=g4886.t1.exon5;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 12949 13304 . + 0 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 13493 13598 . + . ID=g4886.t1.exon6;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 13493 13598 . + 1 ID=cds.g4886.t1;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS exon 13746 13814 . + . ID=g4886.t1.exon7;Parent=g4886.t1 NODE_713_length_18744_cov_41.3585 AUGUSTUS CDS 13746 13814 . + 0 ID=cds.g4886.t1;Parent=g4886.t1 #PROT g4886.t1 g4886 MLVPAILLDGPRAVRPGAGAGEAWAVPPEQLAQLYAVVEDLVILSDGPSPSATAIACVQQAGTVAWVVLGDGADTASAVQTLDAGAAKVAIAPHIAALLADHVPRERLALVVTGAGALNEALSTARADSFSGILVHVDGDCNVAATIAAIRGAVPASGSVRVRVMLPSGHVASPASIASFDAAGIDVVTTAVHPGPDSAGSADGLLPLASGIVAVLRTDRPDGLYATAVVDAHGTALGLVYSAPASIAESLRTGRGVYMSRSRGLWRKGETTGAIQQLVSVAADCDRDALRFVVRQQGAGFCHLETRSCFDGGRAGHPPAAGGIAGLFRTLEARRLSAPPGSYTARLFSDGALLKSKIVEEAHELAAATTKEEVAAEAADVLYFALVRCAGAGVSLEDVERVLDARSMKMTRRPGNAKPQYTAVAAAAAPALSAPLTPSAGVSPNAAAHGQPVTVPLESTPPAAILTEHEYSLLSPSDVTRLCKRPAQENAGELGARVAAIVERVRTEGDKALLELTERFDGARLASPTVPVPRNAADLPPLSPDVKAAIDLAFENVRKFHAAQMNTQPLVVETCPGVTCSRIVRPIERVGLYVPGGSAVLPSTALMLGVPAQVAGCARIVVASPPRRDGTVAPEVVYVAHRVGAECIVLAGGAQAVAAMAYGTESVPKVDKICGPGNQYVTAAKMLVQNDNNAMVSIDMPAGPSEVMVVADASANPAFVAADLLSQAEHGPDSQVVLVACALPRASLDAIHTEVDRQLRLLPREKIARVALSKSFVVSVTDMQQAMHFSNAYAPEHLILNVAGAELYVDAVQHAGSVFLGPYSAESGVSTTSFQKHITTQTVTAEGILSIGDAVATLAAVEGLDAHRNAVVLRKAVILSAASL* # ORIGINAL: g14038.t1 original gene structure, not modified by PASA NODE_3753_length_2824_cov_39.8774 AUGUSTUS gene 1164 2720 . - . ID=g14038;Name=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS mRNA 1164 2720 . - . ID=g14038.t1;Parent=g14038;Name=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS exon 2544 2720 . - . ID=g14038.t1.exon1;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS CDS 2544 2720 . - 0 ID=cds.g14038.t1;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS exon 1778 2318 . - . ID=g14038.t1.exon2;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS CDS 1778 2318 . - 0 ID=cds.g14038.t1;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS exon 1570 1651 . - . ID=g14038.t1.exon3;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS CDS 1570 1651 . - 2 ID=cds.g14038.t1;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS exon 1164 1302 . - . ID=g14038.t1.exon4;Parent=g14038.t1 NODE_3753_length_2824_cov_39.8774 AUGUSTUS CDS 1164 1302 . - 1 ID=cds.g14038.t1;Parent=g14038.t1 #PROT g14038.t1 g14038 MCPLLPMMKSMLRLPADRNLVSKFNQTVDALMTSNDRDVVHAISILKEDIESIEVTSRTPGTTQRAFMEDDLIDQRREEEELRLLQLEEHDAENEKKRSEERIRARIALAEESAGKGGSKANLLQQRKSISRPPTKGQVVTTITSGNALAPPFLSQPQQSGGSSGAGAGAGGSGTLSSSSGDQLASSSRVKKTSVGSTPSGLASGTAASSAATNGTSGASGASNGPRLNRERAQSPKTSVSASNTSLTRRTGSKSSLPDISVGSDTRETRTAGSASLKAKPSVTTTTSATANKDARRSGSPSVAKLPTISTG* # ORIGINAL: g5688.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 20847 21456 . + . ID=g5688;Name=g5688.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 20847 21456 . + . ID=g5688.t1;Parent=g5688;Name=g5688.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 20847 20943 . + . ID=g5688.t1.exon1;Parent=g5688.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 20847 20943 . + 0 ID=cds.g5688.t1;Parent=g5688.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 21188 21456 . + . ID=g5688.t1.exon2;Parent=g5688.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 21188 21456 . + 2 ID=cds.g5688.t1;Parent=g5688.t1 #PROT g5688.t1 g5688 MMTPMALDTAPLMGTNPHVPRHSHTNNAWGGRYNKEHHAAAHYLQLRLGLLHSVGALNTDLGNEVISSVDSLAALLRTLPDAMLYVPNHIRKDSPEVDMFAKRLSQAIMRNNAIAKGYMLR* # PASA_UPDATE: g5690.t1, single gene model update, valid-1, status:[pasa:asmbl_2312,status:12], valid-1 NODE_167_length_33754_cov_40.9399 . gene 26363 27379 . + . ID=g5690;Name=g5690.t1 NODE_167_length_33754_cov_40.9399 . mRNA 26363 27379 . + . ID=g5690.t1;Parent=g5690;Name=g5690.t1 NODE_167_length_33754_cov_40.9399 . exon 26363 27379 . + . ID=g5690.t1.exon1;Parent=g5690.t1 NODE_167_length_33754_cov_40.9399 . CDS 26363 27292 . + 0 ID=cds.g5690.t1;Parent=g5690.t1 NODE_167_length_33754_cov_40.9399 . three_prime_UTR 27293 27379 . + . ID=g5690.t1.utr3p1;Parent=g5690.t1 #PROT g5690.t1 g5690 MASSLPLVTRMPLDECTRLIDAKKLNTNNYPTDFYGREISRDDYFAQMNETTYAAFLPFLDQDAREETFVRALSKSETASLLELSTIGVFRDITAKDVRSHDLSDLMAELDRGIASHHAGASETGSGAKGWFFRLSECSPKDSPRGCRVTCAMDVFLALATSKRCLKSLSRPPEHIVLKPWRQDLDRKHADSAFGQYEFRTFVCDGKLTAVSQYHCNSAYDWSAYSDADFGVVVEKVGVAARALADRGLAVKSYVLDVLCAPSSEGADIIELNPFGMEQASGSALFEWVADAGQLYGMKDRVEVRLVVP* # ORIGINAL: g5689.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 22063 25879 . - . ID=g5689;Name=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 22063 25879 . - . ID=g5689.t1;Parent=g5689;Name=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 25597 25879 . - . ID=g5689.t1.exon1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 25597 25879 . - 0 ID=cds.g5689.t1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 24622 25341 . - . ID=g5689.t1.exon2;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 24622 25341 . - 2 ID=cds.g5689.t1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 24304 24331 . - . ID=g5689.t1.exon3;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 24304 24331 . - 2 ID=cds.g5689.t1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 23606 23774 . - . ID=g5689.t1.exon4;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 23606 23774 . - 1 ID=cds.g5689.t1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 22926 23264 . - . ID=g5689.t1.exon5;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 22926 23264 . - 0 ID=cds.g5689.t1;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 22063 22716 . - . ID=g5689.t1.exon6;Parent=g5689.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 22063 22716 . - 0 ID=cds.g5689.t1;Parent=g5689.t1 #PROT g5689.t1 g5689 MLSDVSNPEDVSAGMDTRNAVPWDRMPDELTLKIFSYLHAMDVAIASHVCTSWERCALDALGRGKDLSLMGEAATDDFLFFVARSLNPSAIDLRDCHNVTEAGIEAIMSSCTRLRKLTFGEPGLSNLAFRHVAANPRLVHLDISGREFNVPKVAFAQTLKTLIIRGRNPIHHAIVRWDFESFSCLETIDIAGMLATEILRTAPIAHTLKKLVVRQCNIYTPSRLPERFTRLESLQLRSMAVWSTAHVNPHGETRNFLAFMLGGAQNLRHLTIDNVHPDQFDVREFSAWIDQLVLLETLEVYMSLGLKGAVLERLITKIGPSLKNLKLYHCSRVTTQEFCWIARSCPNLERLEIPRTKAVTDDVIAAIASCCPHIKQLDVSGCNELSAQALHTIAKMRNLRGLRMIGLHGIVGNTRAMLDLIRAGVAISYYPSATQAVPAWLLQGSGSLRSLGNDNDISVDMSRPIGGSEGIGSTMSASTPEERINHAPDEQCNCARVECVDGCGSGIRRCMLLDHTEVCRSRPIMCPNSQYGCVHVTPRERMGSHLGECSAREHVISMMTDDDQSVITIEGDFTDSGTVSVRCGIVNERTRERDAHAVGGGGTHGGTGVGAGTCGGGAHVFIRRRSRCPLRSKGCDFVGDVAEHLPHCPKYAVVCPTCGRTFAGLGRLSEHACGGELRARRPSVELDGPALRSTFGFARDEHASAGSPSDEEEEDGDGDRNGDEDDGDSN* # ORIGINAL: g5692.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 29392 33550 . + . ID=g5692;Name=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 29392 33550 . + . ID=g5692.t1;Parent=g5692;Name=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 29392 29587 . + . ID=g5692.t1.exon1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 29392 29587 . + 0 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 29888 30106 . + . ID=g5692.t1.exon2;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 29888 30106 . + 2 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 30437 30487 . + . ID=g5692.t1.exon3;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 30437 30487 . + 2 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 30671 30848 . + . ID=g5692.t1.exon4;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 30671 30848 . + 2 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 31249 31300 . + . ID=g5692.t1.exon5;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 31249 31300 . + 1 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 31797 31895 . + . ID=g5692.t1.exon6;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 31797 31895 . + 0 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 32239 32409 . + . ID=g5692.t1.exon7;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 32239 32409 . + 0 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 32957 33144 . + . ID=g5692.t1.exon8;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 32957 33144 . + 0 ID=cds.g5692.t1;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 33388 33550 . + . ID=g5692.t1.exon9;Parent=g5692.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 33388 33550 . + 1 ID=cds.g5692.t1;Parent=g5692.t1 #PROT g5692.t1 g5692 MDGCAPLTDEQVRLIEEKRKAALEKLKLRRQKEEEAPRAGVCPMTKSVTPITGGGNAVPAANMNGARALSTPTLRPQVEATAGAASHGTASCARSKRWTAVPALTVQLELLSKQRFAAHAPFSRVLNEIFGEVPGGRFDKEMRVWTFPTEQYATLKKFLREDTDGVALDAIPSSVIKTLFGDEKLRTPLMPTPRLTSIDSELVSALKPFQRTGVEFAIQHHGRVLIADDMGLGKTVQAICVAAFYRPEWPLLIITPSSVRLTWAEAVKRWLPTTVQPDRVVAVMTAKDAISKSDHDVVILSYDLAAKMHEQLDAMKFHVVIADESHFLKNQKAARTKAIVPLLRRAARAILLSGTPALSRPMELYTQVTAVLPTLFPSAHDFGLRYCAGHRNNFGWDFSGASNLSELSLVLRETVMIRRLKTEVLKELPAKGRKQVCL* # PASA_UPDATE: g5685.t1, single gene model update, valid-1, status:[pasa:asmbl_2310,status:12], valid-1 NODE_167_length_33754_cov_40.9399 . gene 7010 8405 . - . ID=g5685;Name=g5685.t1 NODE_167_length_33754_cov_40.9399 . mRNA 7010 8405 . - . ID=g5685.t1;Parent=g5685;Name=g5685.t1 NODE_167_length_33754_cov_40.9399 . five_prime_UTR 8362 8405 . - . ID=g5685.t1.utr5p1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . exon 8277 8405 . - . ID=g5685.t1.exon1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . CDS 8277 8361 . - 0 ID=cds.g5685.t1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . exon 8030 8154 . - . ID=g5685.t1.exon2;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . CDS 8030 8154 . - 2 ID=cds.g5685.t1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . exon 7731 7845 . - . ID=g5685.t1.exon3;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . CDS 7731 7845 . - 0 ID=cds.g5685.t1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . exon 7010 7472 . - . ID=g5685.t1.exon4;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . CDS 7312 7472 . - 2 ID=cds.g5685.t1;Parent=g5685.t1 NODE_167_length_33754_cov_40.9399 . three_prime_UTR 7010 7311 . - . ID=g5685.t1.utr3p1;Parent=g5685.t1 #PROT g5685.t1 g5685 MSAGTSRPRFHPETEVVLYDAFARFRPLGVRRNLHMMSIVDYVSESMANRRPSAKEIWDHLATMYDIEALNDMEEDVFAAFEGDFELPESEFGQLMGARRATNPANDDAKTPGTKRRGRSTGGASETPSTDTPATAKRKRNADPLPSTPSPPPTQAKRTRR* # ORIGINAL: g5691.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 27870 28442 . - . ID=g5691;Name=g5691.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 27870 28442 . - . ID=g5691.t1;Parent=g5691;Name=g5691.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 27870 28442 . - . ID=g5691.t1.exon1;Parent=g5691.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 27870 28442 . - 0 ID=cds.g5691.t1;Parent=g5691.t1 #PROT g5691.t1 g5691 MALLFARDGVHRVSLGLVLLLSLCAQPHAVRAARVSTYDGALRSVCIDAPQDTFIIPGDSSCYSADSVRYYRLSCALQVSSSQWTLQRMEDGDSTCSKHLQYSVSGVNASSCWRAGRDILTMVTVDCGDNGGSGSGVASWVYSLIGVMAAVAVIGGGMIFVQLRYGSRFWTSCSCFADNAAEAGQYTPLN* # ORIGINAL: g5684.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 1006 6641 . + . ID=g5684;Name=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 1006 6641 . + . ID=g5684.t1;Parent=g5684;Name=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 1006 1055 . + . ID=g5684.t1.exon1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 1006 1055 . + 0 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 1219 1553 . + . ID=g5684.t1.exon2;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 1219 1553 . + 1 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 1806 2296 . + . ID=g5684.t1.exon3;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 1806 2296 . + 2 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 2717 2846 . + . ID=g5684.t1.exon4;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 2717 2846 . + 0 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 3167 4671 . + . ID=g5684.t1.exon5;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 3167 4671 . + 2 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 4977 5118 . + . ID=g5684.t1.exon6;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 4977 5118 . + 0 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 5343 5623 . + . ID=g5684.t1.exon7;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 5343 5623 . + 2 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 5810 5842 . + . ID=g5684.t1.exon8;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 5810 5842 . + 0 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 6004 6286 . + . ID=g5684.t1.exon9;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 6004 6286 . + 0 ID=cds.g5684.t1;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 6409 6641 . + . ID=g5684.t1.exon10;Parent=g5684.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 6409 6641 . + 2 ID=cds.g5684.t1;Parent=g5684.t1 #PROT g5684.t1 g5684 MKFGKRLAESMVPEWTRHYIRYAILKITVKKMAHDISNGLSSQCVADRKAAFFFSLDRELERVTQFYNKKCAEYSERFVALVARADRLRLQPMLASGTHLVVQDVAAAIEELLSSMRRLRTFADANYAGFTKILKKYARRVGGDTDAYMDRKVNPEPFADRKEIDHMVRVLQYRQTEFSAWQWEAVAQCTLDGSCGTFFNAYNASLDTDDADMLERARVEVHGEGDGVSNRLPAGLLHRACARGALHCLERILAWGADPNEADADGRRLPIHIAAENNRGSVVLRLVSAGADVRSFDADGRQALHLAAINNGNDAIDALAQCGAPLSCDRDGTTASRAVEALLSRYGTKAVQPTLGEPSYLVLACKLNERAIVQLLLERGMMNVEEEDEDGVCPMAVACAAGACEITRLLLDHGASPEHKEKRTLQTPLFLAAIEGHLGCVRLLLERGAKAIVMDIDGWRPFTHALFRGHTDVALLINEAQVAERQRLHNVAMLWQKGLRLGERINGDAQLGTSPMQRASSLHNLPGGMVSVVSAASAAASASASALAEKAPASAAMRPRRNSLIDVQHTLMEMKAASKISVTERTYGHRFLRSRSEIHVSIACGGTLVAADYAPAAQPGPLPHKSAGAHTGLQPVFSAPDACEYPGGGSMSKWNPIAEAPGMVVPKRGEYRLVISAIDASSGYGGTRGNDGSVASGGIGANNGGRGSAGSGGSGVSEAGSSGGRETPGGFREDLKHMIDLPLGYNDRATVVFDVADPWSVVLRVDLVERFSCSDIIARGAVFMSAQQGSSCGEVACTLLGDKMQLIGTIKIGYVVATPFRHSGLEISKRTYWKATKTLPLIGHRGMGVTKPSSLSHGRLGTVQENTLLSFITAASLGAEYVEFDVQVTKDGEAVIYHDWLVTETGYELPVQRLSLEQFRHLRETMLAFSAAASGGRSVRTRAKGGLKSKSTGDINGPVTSGPAVLSAPFATLAEVFQKVPQNVGFNIEVKYPVAEEIIAFNLHPPDLGTYVDAILKCVYDNANDARPVILSSFHPDACRLLALKQPNIPVFLLSNGGVIHMSDTRCNSIQQAISFAKEANLLGIVLRSDPIIRCPELIHAIKSSGLMLLTWGDMNNDVENVRLQQQMGVDAVIVDHVAHVRNGLHTGGGQGADAVAVNR* # PASA_UPDATE: g5686.t1, single gene model update, valid-1, status:[pasa:asmbl_2311,status:3], valid-1 NODE_167_length_33754_cov_40.9399 . gene 10372 13886 . + . ID=g5686;Name=g5686.t1 NODE_167_length_33754_cov_40.9399 . mRNA 10372 13886 . + . ID=g5686.t1;Parent=g5686;Name=g5686.t1 NODE_167_length_33754_cov_40.9399 . five_prime_UTR 10372 10467 . + . ID=g5686.t1.utr5p1;Parent=g5686.t1 NODE_167_length_33754_cov_40.9399 . exon 10372 13886 . + . ID=g5686.t1.exon1;Parent=g5686.t1 NODE_167_length_33754_cov_40.9399 . CDS 10468 13590 . + 0 ID=cds.g5686.t1;Parent=g5686.t1 NODE_167_length_33754_cov_40.9399 . three_prime_UTR 13591 13886 . + . ID=g5686.t1.utr3p1;Parent=g5686.t1 #PROT g5686.t1 g5686 MAPQETATAALLVQLEGAGRKEAGTTMAQHVKTTGLLKADKAALFATLAENMNKQGKTGADSREGACICITALCKEIEAPVVPYVLPLLPAIIELMGDKFRPVQIAAQEAGEAIVAALNPNAVRTILPHLLGKSARWQSNHFRMESLAKLVKNAPLQMQRSMGELVPFLSEAMWDLKPEVKESAKAAMTAACNAVDNRDIKPFIPNLLHSIENPKDVPETVHKLSATTFVQSVTFAALSVIAPLLVRGLVERSTATKRQCARIIENMTKLVDHSYDVAPFLPKLLPLLESAKNEVSDPECRDVCQKAYEILVKKGNLKEHVNKLASSAAILPIVKAGLGAHAGDVPEHIQAFVSDLAFTLLDIKVFEPEAWTNTLVPYLHPFVDGHVATQVVDKVLHEALIDEKGVDDVHEEEDAEELCNTTFSLAYGSKILLNNTQLKLMRGYRYGLVGQNDSGKTSLLRAIAQYKVDGFPPKDEVRTIFVETDIQGELSDLSVLDYIYADALLKDCGVPREQMAAVLNSVGFTDESPANITTPVGALSGGWKMKLALARAMLLRADILLLDEPTNHLDAYNVKWVEGYLNGLTGVTSIIVSHDSGLLDRVCTHIIQIDSLKLHVHKGNLSEFVKIVPEARSYFELKASKSVFKFPPPGPLDGINSKGKPIMKMTDITFTYPGASKPQLRNVTIRCSLSSRVACLGVNGAGKSTMIKLLTGELKPDDGSGEVWKHPNARVAYVAQHAFHHIESHLDKTPNEYIRWRYENGRDKEALEKITLILTPEEEAKMKLPFMVELEEPDGTLKREKKIVESFTENRREISKRIQYEVRFVNQTNPAWVNQQVLLDNGFSKVLKGIDEAIALAASTYGRALTMVNVEKHLEDVGLEREFGTHMRLRALSGGQKVKVVLAAAMWNCPHMLILDEPTNYLDRESLGALSGAIRDFEGGVVMITHNNEFCSALCPEVWHLENNTLNLKGDAEWMKAAMAEKIVVKDIAETMIDKYGNEVKVKGPKKKLSRQERIKKEKSRKMRIAQGLTVSDDEDEDFE* # ORIGINAL: g5687.t1 original gene structure, not modified by PASA NODE_167_length_33754_cov_40.9399 AUGUSTUS gene 14108 19713 . - . ID=g5687;Name=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS mRNA 14108 19713 . - . ID=g5687.t1;Parent=g5687;Name=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 19437 19713 . - . ID=g5687.t1.exon1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 19437 19713 . - 0 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 19070 19166 . - . ID=g5687.t1.exon2;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 19070 19166 . - 2 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 18671 18764 . - . ID=g5687.t1.exon3;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 18671 18764 . - 1 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 17111 18393 . - . ID=g5687.t1.exon4;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 17111 18393 . - 0 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 16565 16844 . - . ID=g5687.t1.exon5;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 16565 16844 . - 1 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 14760 16088 . - . ID=g5687.t1.exon6;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 14760 16088 . - 0 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 14463 14560 . - . ID=g5687.t1.exon7;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 14463 14560 . - 0 ID=cds.g5687.t1;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS exon 14108 14228 . - . ID=g5687.t1.exon8;Parent=g5687.t1 NODE_167_length_33754_cov_40.9399 AUGUSTUS CDS 14108 14228 . - 1 ID=cds.g5687.t1;Parent=g5687.t1 #PROT g5687.t1 g5687 MPKHKRSDDESDGLKVSGDVLVERDAKRPRVAGDHLHDGTTESGGSEAGGVASVRHIDSGEVEFAWECSTGARALASSRILVVGGGCAAEETVKCLAQCGLRAIEWYIPEDSSLISGANRASNDRLLPAAISGHGVGAVTVVNASQRPLPPVSDFDCVVAVNLSAAYALQLDDVCRTHALSPGSGNGNGGRIVTTPFVASWSSNALASVFVDRGPLFFVEDANPTSHERRVGCPIVSVQPQIVLPSGDVGNRATQWELVFKIAEGRRLDVSDAGGHVILRGMPDALSWMEEPSVAHAVRFLTAHSFAVTCDAAAAAVVASIVEREGTGASWTLAGGIAYPASAPPTCSMTHLPLSLQMDTPTFNPPGGNPGDAEDELSRAHGCWKRAVSASGADIAVGGGTHTSAGTYERALAVVSAGIAAVEAVKAVSKCHQPLTQWIHVASHPACCEASTLAAQASRLEERTTATEVIVATDSAQQAGEAETGATCIPVRDGIGLVDVGCRDAHMADADRSASGVREDGGLAAHMARNALSQARVLLLGCGHVGAKVAECLAASGVAQSLGSDASGGAIILVDGSPNSPVCGSVPIDHPTQPCQSRASAIAASVSTIGANAIAVDRKFDASEREFFSDTFLSSVGVVVDACVETLTQRHYVDSRCLAIPVASIDVGLHGTMGHVQAIVPHVSEPYYTTRDISLDLDPPPHCMLKSFPSTPDMCVTWAQKKFLSSFCVKPTAFNEFATQATRDGANRAADADRGSTLPQSHAIDISAFMAVLTNTTESDADFGSKRLCARMLSRRPRTRTECLAEARARFAKYFGRSAVKLLRAFPLTHTTEDGLPFWAPPRRAPTPLDYDADDSLSALFVSACAALLSVVYGIGAGPCSEFEGSDACFVDDKAASRAKTTSESATPADADAQDDALAIHSHHLSVACARVSGMTTALPLNVLHLDATFADQRDSVDSAMDLSNSHPRSSAVSRAADDFVYASANLRARMYGLVGPNGRQCPAASRVFCRALSRGVVPTLPPCVAIVAGLASVAAIDVLLAREALRELNRADKVSGVSMPNRVPSNRFFNSAACAYVDARPSSPARSVLRPGLELTAWDRWVVQGGTDMTLGGFCKELEARYNLIVTGVFRDSATMLYMSAFPSHATRLQTKMTHTLPDAVSVGAAYVDLIVSFEDDAGEDVDGPPVRYYF* # ORIGINAL: g7821.t1 original gene structure, not modified by PASA NODE_3710_length_2910_cov_33.8653 AUGUSTUS gene 151 2005 . + . ID=g7821;Name=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS mRNA 151 2005 . + . ID=g7821.t1;Parent=g7821;Name=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 151 225 . + . ID=g7821.t1.exon1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 151 225 . + 0 ID=cds.g7821.t1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 395 483 . + . ID=g7821.t1.exon2;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 395 483 . + 0 ID=cds.g7821.t1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 967 1055 . + . ID=g7821.t1.exon3;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 967 1055 . + 1 ID=cds.g7821.t1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 1262 1389 . + . ID=g7821.t1.exon4;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 1262 1389 . + 2 ID=cds.g7821.t1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 1622 1693 . + . ID=g7821.t1.exon5;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 1622 1693 . + 0 ID=cds.g7821.t1;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS exon 1910 2005 . + . ID=g7821.t1.exon6;Parent=g7821.t1 NODE_3710_length_2910_cov_33.8653 AUGUSTUS CDS 1910 2005 . + 0 ID=cds.g7821.t1;Parent=g7821.t1 #PROT g7821.t1 g7821 VSVLFGHVVRGMAAVTRVMEYIHYKPSIPLTGGFKLDYGVGEVEFRNVSFKYPTRPNQTVLYDLSLKVPAGKVVALVGSSGSGKSTIAALVERFYDPHSGEITVDGADIKTLDLKWLRGEVIGYINQEPVLFAGSVMDNIRYGRPNATDDEVFEAARLANADGFIRDFPDGEINAFYKHVSP* # ORIGINAL: g13471.t1 original gene structure, not modified by PASA NODE_3080_length_4378_cov_39.3649 AUGUSTUS gene 129 1327 . + . ID=g13471;Name=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS mRNA 129 1327 . + . ID=g13471.t1;Parent=g13471;Name=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS exon 129 233 . + . ID=g13471.t1.exon1;Parent=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS CDS 129 233 . + 0 ID=cds.g13471.t1;Parent=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS exon 424 570 . + . ID=g13471.t1.exon2;Parent=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS CDS 424 570 . + 0 ID=cds.g13471.t1;Parent=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS exon 1070 1327 . + . ID=g13471.t1.exon3;Parent=g13471.t1 NODE_3080_length_4378_cov_39.3649 AUGUSTUS CDS 1070 1327 . + 0 ID=cds.g13471.t1;Parent=g13471.t1 #PROT g13471.t1 g13471 LETLEKSVESREFSRRRNPPTFFSANSYKGHRNKTTVKDVNFYGPNCEYVVSGSDDGNIFLWDRRTAIIVRVVKGDEDVVNCIEGHPHDATLAASGIDNTIKLLQPIHNGSPVPEHMNTTGSSDEDDESDEIDSEFAMMIMRSLIAQRRNARSEDVSGSTDTTQSCEVQ* # PASA_UPDATE: g13472.t1, single gene model update, valid-1, status:[pasa:asmbl_5529,status:12], valid-1 NODE_3080_length_4378_cov_39.3649 . gene 2100 4226 . - . ID=g13472;Name=g13472.t1 NODE_3080_length_4378_cov_39.3649 . mRNA 2100 4226 . - . ID=g13472.t1;Parent=g13472;Name=g13472.t1 NODE_3080_length_4378_cov_39.3649 . five_prime_UTR 4209 4226 . - . ID=g13472.t1.utr5p1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . five_prime_UTR 4059 4089 . - . ID=g13472.t1.utr5p2;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 4209 4226 . - . ID=g13472.t1.exon1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 4002 4089 . - . ID=g13472.t1.exon2;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . CDS 4002 4058 . - 0 ID=cds.g13472.t1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 3703 3859 . - . ID=g13472.t1.exon3;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . CDS 3703 3859 . - 0 ID=cds.g13472.t1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 3118 3254 . - . ID=g13472.t1.exon4;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . CDS 3118 3254 . - 2 ID=cds.g13472.t1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 2741 2846 . - . ID=g13472.t1.exon5;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . CDS 2741 2846 . - 0 ID=cds.g13472.t1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . exon 2100 2406 . - . ID=g13472.t1.exon6;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . CDS 2186 2406 . - 2 ID=cds.g13472.t1;Parent=g13472.t1 NODE_3080_length_4378_cov_39.3649 . three_prime_UTR 2100 2185 . - . ID=g13472.t1.utr3p1;Parent=g13472.t1 #PROT g13472.t1 g13472 MASEADRFKAVTAKNCVDQAKFFLNAFWKEYSGDAETLWGYVQKFASLDLTKGKQTVDLDEFNAHRFLEQVGETLRVVELRDTLRAIDLDFNKRMALIEYLLFKYKQSIKELLSRPQGMNEELMKAQQALEAVQTEINRIESEKERLGKAAEGTGVKANAARNELEQLLSADPTNLNRAVLTAEAALRKAQKSGSVDAQGALWWANRELEEAKKYKPRGGIKPIA* # ORIGINAL: g8065.t1 original gene structure, not modified by PASA NODE_2290_length_6841_cov_65.4551 AUGUSTUS gene 5510 6744 . + . ID=g8065;Name=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS mRNA 5510 6744 . + . ID=g8065.t1;Parent=g8065;Name=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 5510 5533 . + . ID=g8065.t1.exon1;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 5510 5533 . + 0 ID=cds.g8065.t1;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 5645 5714 . + . ID=g8065.t1.exon2;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 5645 5714 . + 0 ID=cds.g8065.t1;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 5922 6102 . + . ID=g8065.t1.exon3;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 5922 6102 . + 2 ID=cds.g8065.t1;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 6370 6530 . + . ID=g8065.t1.exon4;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 6370 6530 . + 1 ID=cds.g8065.t1;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 6677 6744 . + . ID=g8065.t1.exon5;Parent=g8065.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 6677 6744 . + 2 ID=cds.g8065.t1;Parent=g8065.t1 #PROT g8065.t1 g8065 MLVNNPQRAVDDAIDGIVASNRLLCRSGRYRVVYANDVDSHRDSRVTLISGGGSGHEPAHVGFVGDGMLSCAVAGDVFASPPPHAIIEAIKRVCGKAGTLLIVKNYTGDVLNFGLALERARAIGFNVEMVVVGDDCALLDSNGRPGRRGLAGTILVHKIAGAAAKRG* # ORIGINAL: g8064.t1 original gene structure, not modified by PASA NODE_2290_length_6841_cov_65.4551 AUGUSTUS gene 224 2845 . + . ID=g8064;Name=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS mRNA 224 2845 . + . ID=g8064.t1;Parent=g8064;Name=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 224 348 . + . ID=g8064.t1.exon1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 224 348 . + 2 ID=cds.g8064.t1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 778 972 . + . ID=g8064.t1.exon2;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 778 972 . + 0 ID=cds.g8064.t1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 1379 1492 . + . ID=g8064.t1.exon3;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 1379 1492 . + 0 ID=cds.g8064.t1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 1764 1958 . + . ID=g8064.t1.exon4;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 1764 1958 . + 0 ID=cds.g8064.t1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 2274 2360 . + . ID=g8064.t1.exon5;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 2274 2360 . + 0 ID=cds.g8064.t1;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS exon 2681 2845 . + . ID=g8064.t1.exon6;Parent=g8064.t1 NODE_2290_length_6841_cov_65.4551 AUGUSTUS CDS 2681 2845 . + 0 ID=cds.g8064.t1;Parent=g8064.t1 #PROT g8064.t1 g8064 IPIYYAPTDSYIGLVTVYDIMVYVAFQLFRQADEEVTTEEMKERRQRIATMSVRDLIGTASYISTGRWRESGLAVLSCDTPVLEIMRPMSMGLERALVQLSPEDHEPDMKNVGRTISHRMLSQMDLLRFLCQHHIHFAESFAKKLRDIGLDVPSSNTRPIEITCEASTLDAYRLMFGEGVEALAVIDTKTGALRATLSSSDLRGIRINQIEDVLLSVKAFLERGRLGAMASPIAVTAEATLLMTATMALVGKVHRVWVVDSQGSPVTFVRLRDIISVILRELPEGNMPTLEE* # ORIGINAL: g13431.t1 original gene structure, not modified by PASA NODE_2554_length_5909_cov_42.2161 AUGUSTUS gene 2407 4311 . + . ID=g13431;Name=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS mRNA 2407 4311 . + . ID=g13431.t1;Parent=g13431;Name=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS exon 2407 2500 . + . ID=g13431.t1.exon1;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS CDS 2407 2500 . + 0 ID=cds.g13431.t1;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS exon 2725 3007 . + . ID=g13431.t1.exon2;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS CDS 2725 3007 . + 2 ID=cds.g13431.t1;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS exon 3425 3525 . + . ID=g13431.t1.exon3;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS CDS 3425 3525 . + 1 ID=cds.g13431.t1;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS exon 3893 4311 . + . ID=g13431.t1.exon4;Parent=g13431.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS CDS 3893 4311 . + 2 ID=cds.g13431.t1;Parent=g13431.t1 #PROT g13431.t1 g13431 MASSSSLAVFSILIDIFMISAVNVRKTQAACISFRTFAGKAELVCLSTADLTGGLSHVVKGAGDAQMDCKTLSDDSSAFVTCGGRYVVSSPEDGDTTALSSQFAEAVDGVGYVTARIGHNGESTLRQETQSGANYKSAVASTASLVCRISIQPMFLQVKESSETNGCYLAAYRSDDLETEPEALTCSATKEGETTNYKFSTAQGTDIVTALSDNPLCVVGSKYYVTAWILVSDTFGQTICNCATDPETVSSFSNDDGTYTVPRYESLPHLRNRTDKIMNNWREAASGDTGFRQLLCLR* # ORIGINAL: g13432.t1 original gene structure, not modified by PASA NODE_2554_length_5909_cov_42.2161 AUGUSTUS gene 4805 5254 . - . ID=g13432;Name=g13432.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS mRNA 4805 5254 . - . ID=g13432.t1;Parent=g13432;Name=g13432.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS exon 4805 5254 . - . ID=g13432.t1.exon1;Parent=g13432.t1 NODE_2554_length_5909_cov_42.2161 AUGUSTUS CDS 4805 5254 . - 0 ID=cds.g13432.t1;Parent=g13432.t1 #PROT g13432.t1 g13432 MAPPTPVILADSESLRRRSSVSRETPPASPAAPPLPVAAPQVYLSHLSLDDARPFGKASSASPVSSPQSSCRVHEAQDEHREDKNSGVMSFEMSLEDAITPPSPSSVHAPAAASSSPGRTVSRRRSSGAPDVIALPVQFKGRAGRLVLK* # PASA_UPDATE: g13430.t1, single gene model update, valid-1, status:[pasa:asmbl_4547,status:12], valid-1 NODE_2554_length_5909_cov_42.2161 . gene 222 1434 . - . ID=g13430;Name=g13430.t1 NODE_2554_length_5909_cov_42.2161 . mRNA 222 1434 . - . ID=g13430.t1;Parent=g13430;Name=g13430.t1 NODE_2554_length_5909_cov_42.2161 . five_prime_UTR 1158 1434 . - . ID=g13430.t1.utr5p1;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . exon 1107 1434 . - . ID=g13430.t1.exon1;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . CDS 1107 1157 . - 0 ID=cds.g13430.t1;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . exon 811 893 . - . ID=g13430.t1.exon2;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . CDS 811 893 . - 0 ID=cds.g13430.t1;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . exon 222 492 . - . ID=g13430.t1.exon3;Parent=g13430.t1 NODE_2554_length_5909_cov_42.2161 . CDS 222 492 . - 1 ID=cds.g13430.t1;Parent=g13430.t1;3_prime_partial=true #PROT g13430.t1 g13430 MDAAPATMELRLRSPVKDFPDEVYVWPLNMIDEYDPAHDLLETIRLVSKEFPELDDMFTDDLGSVDRKSHSQMADLCARYNCAIDQIHKVSVGAGLSAPTTAASFELVHHIMKQVYNRVIDDPMRLNNYRGFSEE # ORIGINAL: g8068.t1 original gene structure, not modified by PASA NODE_3305_length_3783_cov_36.9477 AUGUSTUS gene 428 3661 . + . ID=g8068;Name=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS mRNA 428 3661 . + . ID=g8068.t1;Parent=g8068;Name=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 428 565 . + . ID=g8068.t1.exon1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 428 565 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 771 860 . + . ID=g8068.t1.exon2;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 771 860 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 1057 1090 . + . ID=g8068.t1.exon3;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 1057 1090 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 1362 1492 . + . ID=g8068.t1.exon4;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 1362 1492 . + 2 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 1689 1790 . + . ID=g8068.t1.exon5;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 1689 1790 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 1979 2111 . + . ID=g8068.t1.exon6;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 1979 2111 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 2361 2511 . + . ID=g8068.t1.exon7;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 2361 2511 . + 2 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 2688 2806 . + . ID=g8068.t1.exon8;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 2688 2806 . + 1 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 2982 3382 . + . ID=g8068.t1.exon9;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 2982 3382 . + 2 ID=cds.g8068.t1;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS exon 3560 3661 . + . ID=g8068.t1.exon10;Parent=g8068.t1 NODE_3305_length_3783_cov_36.9477 AUGUSTUS CDS 3560 3661 . + 0 ID=cds.g8068.t1;Parent=g8068.t1 #PROT g8068.t1 g8068 MADGGGVAVEMAEVRPSDGHILEQINFDGPITVEFENVSYSVDDVVAPVSFIDKLKGHKPEVKEKYLLSGISGQFKPRQLTALIGPSGSGKTILLDVLSGRRSAGHTYGEIRFNGQPFSKALRTEIGFVEQRDVLLPWLSVRETFMYTARLKFPPSVPIEDLEKKVNDVIEQLALTICADNIIRSPPALGISGGQAKRTNIGVELITNPKILLLDEPTTGLDSATSVEVVKVLRQLAEGDRTIVATIRQPSKNAFAMFDRLLMLVEGQTAYYGNLSGAVPYFAGLGYACPPKMNPAEFLVNLTDPRATPIAGQQLAPQGFFTQEYAKSHLHEERLRSIADTEIRRQSTRKLLKEKRESESTNLGTTGKRGRRQVTDEEEKDTSEHFANTSFRNTMTLTERLGMQKRRNKLYGVARIGRILIMGAILASLFHTQPHDEAGVTAIVSVILFSIMMLAFGSMSFMGVCE* # PASA_UPDATE: g5411.t1, single gene model update, valid-1, status:[pasa:asmbl_7241,status:12], valid-1 NODE_4348_length_1771_cov_28.5486 . gene 4 1712 . - . ID=g5411;Name=g5411.t1 NODE_4348_length_1771_cov_28.5486 . mRNA 4 1712 . - . ID=g5411.t1;Parent=g5411;Name=g5411.t1 NODE_4348_length_1771_cov_28.5486 . exon 1552 1712 . - . ID=g5411.t1.exon1;Parent=g5411.t1 NODE_4348_length_1771_cov_28.5486 . CDS 1552 1712 . - 0 ID=cds.g5411.t1;Parent=g5411.t1 NODE_4348_length_1771_cov_28.5486 . exon 255 1233 . - . ID=g5411.t1.exon2;Parent=g5411.t1 NODE_4348_length_1771_cov_28.5486 . CDS 255 1233 . - 1 ID=cds.g5411.t1;Parent=g5411.t1 NODE_4348_length_1771_cov_28.5486 . exon 4 105 . - . ID=g5411.t1.exon3;Parent=g5411.t1 NODE_4348_length_1771_cov_28.5486 . CDS 4 105 . - 0 ID=cds.g5411.t1;Parent=g5411.t1 #PROT g5411.t1 g5411 MPILQVNISQSLRAEIETAVKAFVEKGQQVPAVDVFKKAQEAIFDLMHRDPYRRFIESDVYADLLEYLNDNGSNLFDRILEEFFAEIDSSADVISAGLGGVQIGQRTSIIGGDSLGLGLGGAAAIGNDASTSPNQVRKRVGSGATDTSPNMRRRMGSSTGGSSTGGGSGGGSPTQGRKRVSDASTGSVSSSTSSIAGQAAAAGAAPSASSSPAGNPGSSRPSSMVGKSSIVWVPTFGGDGAIICKKRGTGSMVCIREMKKMDVSADKVVAAALDTSAAGLARWLGKVVESRVVETVIKDTCVLHVTKKTPFPLHRGRDFSVIRLSRQDLDGVHYVLVRSIGYKQLPETDKYIRGKIAASGFMVLPDKNSPNKCFVTFLSQIDMRLPNFETKMHRREVAKTSVLNALQKHILSH* # ORIGINAL: g3047.t1 original gene structure, not modified by PASA NODE_6734_length_517_cov_23.3552_potentialcontaminant AUGUSTUS gene 1 495 . - . ID=g3047;Name=g3047.t1 NODE_6734_length_517_cov_23.3552_potentialcontaminant AUGUSTUS mRNA 1 495 . - . ID=g3047.t1;Parent=g3047;Name=g3047.t1 NODE_6734_length_517_cov_23.3552_potentialcontaminant AUGUSTUS exon 1 495 . - . ID=g3047.t1.exon1;Parent=g3047.t1 NODE_6734_length_517_cov_23.3552_potentialcontaminant AUGUSTUS CDS 1 495 . - 0 ID=cds.g3047.t1;Parent=g3047.t1 #PROT g3047.t1 g3047 MMPGMNRGAKFSVALSAPWQLNSQITLTNAVVSCDVLADGYSATPYFNGTVVGTLTLGSAVLNVAASYPFAERRPLTFTLVSGSGLKLSQLLALLPGAPTITNTMEGFPALPGSTAITDLELRSFSYSAVTSALDSMSFAVAVPIDWTVFTGFVVKNAVLSVSVK # ORIGINAL: g10946.t1 original gene structure, not modified by PASA NODE_2593_length_5761_cov_40.4595 AUGUSTUS gene 473 1317 . + . ID=g10946;Name=g10946.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS mRNA 473 1317 . + . ID=g10946.t1;Parent=g10946;Name=g10946.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS exon 473 510 . + . ID=g10946.t1.exon1;Parent=g10946.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS CDS 473 510 . + 0 ID=cds.g10946.t1;Parent=g10946.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS exon 855 1317 . + . ID=g10946.t1.exon2;Parent=g10946.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS CDS 855 1317 . + 1 ID=cds.g10946.t1;Parent=g10946.t1 #PROT g10946.t1 g10946 MRLLHGLLDQIGGFPVGTFLASHKTGEPHAVFYRAEPSVSDVIEGGDATSPRRSLRKGYHDLHALYAEASLIAASRADAAAAHTYPPFLSVRHFCMPLPECDRDVECGDGEGAMTAAGGGDRALSADGKRGRAQDKRRPGSADTVGHVTGGVRKKRRGKRGGGARG* # ORIGINAL: g10947.t1 original gene structure, not modified by PASA NODE_2593_length_5761_cov_40.4595 AUGUSTUS gene 2441 5461 . + . ID=g10947;Name=g10947.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS mRNA 2441 5461 . + . ID=g10947.t1;Parent=g10947;Name=g10947.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS exon 2441 5019 . + . ID=g10947.t1.exon1;Parent=g10947.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS CDS 2441 5019 . + 0 ID=cds.g10947.t1;Parent=g10947.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS exon 5284 5461 . + . ID=g10947.t1.exon2;Parent=g10947.t1 NODE_2593_length_5761_cov_40.4595 AUGUSTUS CDS 5284 5461 . + 1 ID=cds.g10947.t1;Parent=g10947.t1 #PROT g10947.t1 g10947 MDKANPAGPGRGDAHSGEHVPSPAIAMAQDVNMQSIPPSTPLSSSAPLSSSTSIAATYAPSVGAVSALSLGFVSAAGGANVASMQSTTAAITPTAAVAAGERVQHFFAKWDANRSSLVVPGICIIRVTLLSFVRPLVDCDGVFLGASMRGGLRRFVRSHEIPIVKVAHAPSAVPGGSDASHHGASSSSTSKTAPAAAAIQPSKIDVDITFTIQYPHILKTPGSIISITIRRRKYYKGQKMLGYKVLGMANISMAEVEECPLEGIDIAFFPPKLTGRIAGARSHALNEGEPPVAHARVDVITQLKEASRRSRGRRRNEARSPSGTEAGTVTGGAVGGGGKSASKIPGHPMQRSQSGDALHEPAAPSASSADERHVNSLSTSLTSAGISAAAASANANVSHSGNALDQHASDGAGHHLHPTNAHDDSASALSDTSGTDSGEEEPRTMGGHETEEALSEDDTPRVEKGKSPGRAKFLEMSRLHKALISKKLSAFIRRFRADDDAGDADVGEESALSGGEGGASVALPPTSSNSHPVANALAVNSGSSAAQKKDSRARNVFRPVVTFGGASTRRLRERFRRNGSKPGEATPDAADESAVEDQYARAEEEDMLSAQGTVPEDEDYDIDDVSSEANSDENSLERESMLGDADEGSIRGVLSPRPLLRPFYESRQLSDMNLTNDTAANAHMSRGGVVVDVPATADASSVRTTHMHAHAQTVQTAPADSRDGGSVSNSSSINATVDVPPRSVSPGEESRAVGVRASIASRVSDVLSHHVTHSPTTAAHVVIVGTAEPGGMRLFRDLESSRQLLCTGSHVQSQSHGSDGGSVRVGLLSTTPLHRCTVAVQGAADCHAVLAAIVAFFEDGKRVYPAKPVKIAVAGGDDLVNDVLRAFVDQMSKRPTEWLASAAFFVVPVGEQHRECGA* # PASA_UPDATE: g2238.t1, single gene model update, valid-1, status:[pasa:asmbl_6191,status:12], valid-1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . gene 53 2655 . - . ID=g2238;Name=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . mRNA 53 2655 . - . ID=g2238.t1;Parent=g2238;Name=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . five_prime_UTR 2334 2655 . - . ID=g2238.t1.utr5p1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 2293 2655 . - . ID=g2238.t1.exon1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 2293 2333 . - 0 ID=cds.g2238.t1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 2071 2206 . - . ID=g2238.t1.exon2;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 2071 2206 . - 1 ID=cds.g2238.t1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 1467 1618 . - . ID=g2238.t1.exon3;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 1467 1618 . - 0 ID=cds.g2238.t1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 1077 1152 . - . ID=g2238.t1.exon4;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 1077 1152 . - 1 ID=cds.g2238.t1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 567 881 . - . ID=g2238.t1.exon5;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 567 881 . - 0 ID=cds.g2238.t1;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . exon 53 201 . - . ID=g2238.t1.exon6;Parent=g2238.t1 NODE_3543_length_3236_cov_42.9516_potentialcontaminant . CDS 53 201 . - 0 ID=cds.g2238.t1;Parent=g2238.t1;3_prime_partial=true #PROT g2238.t1 g2238 MSRSHKLLKTLLHSKPEDRTLDEIEVIRKCLDGLACLRSVGHKVVRELAAKFELREYNRGDFIVKRNDAVAYWYIIISGEAVIRIDGDDFVRLYEGCSFGEQSWFAKGSRDVCVLAHLPCQILAVSRDYYKYMQRDARRGSVSASAPDAPSGGERRLSVATGRHDMSPSVSPQMTSLQPDSSPSLNFSPSGGAMSKSRSSFLGTITRTVHRMRRVSSPASMSDKDLEEPEMVYTMRSPDMRSDSICETPSSAASGDGHDNRAVSVASPVMSDSSGISFGGDYVKDALEK # PASA_UPDATE: g13022.t1, single gene model update, valid-1, status:[pasa:asmbl_4680,status:12], valid-1 NODE_2627_length_5615_cov_74.6682 . gene 415 5535 . + . ID=g13022;Name=g13022.t1 NODE_2627_length_5615_cov_74.6682 . mRNA 415 5535 . + . ID=g13022.t1;Parent=g13022;Name=g13022.t1 NODE_2627_length_5615_cov_74.6682 . five_prime_UTR 415 580 . + . ID=g13022.t1.utr5p1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . five_prime_UTR 1186 1227 . + . ID=g13022.t1.utr5p2;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 415 580 . + . ID=g13022.t1.exon1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 1186 1305 . + . ID=g13022.t1.exon2;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 1228 1305 . + 0 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 1614 1828 . + . ID=g13022.t1.exon3;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 1614 1828 . + 0 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 2095 2233 . + . ID=g13022.t1.exon4;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 2095 2233 . + 1 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 2685 2778 . + . ID=g13022.t1.exon5;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 2685 2778 . + 0 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 3121 3230 . + . ID=g13022.t1.exon6;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 3121 3230 . + 2 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 3490 3620 . + . ID=g13022.t1.exon7;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 3490 3620 . + 0 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 4045 4107 . + . ID=g13022.t1.exon8;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 4045 4107 . + 1 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 4403 5346 . + . ID=g13022.t1.exon9;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 4403 5346 . + 1 ID=cds.g13022.t1;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . exon 5531 5535 . + . ID=g13022.t1.exon10;Parent=g13022.t1 NODE_2627_length_5615_cov_74.6682 . CDS 5531 5535 . + 2 ID=cds.g13022.t1;Parent=g13022.t1 #PROT g13022.t1 g13022 MKKIQVGALKPDETFDALREAKLLYQLSHPNIVRYRDSFLDGDCFCIITEFCRGGDLHQRIQDTKKAGELMHEDDAMDWFTQLTMAIHYMHERRILHRDLKSSNVFLTHDNIVKLGDLGIAKVLMGTIDSASTFTGTPYYMSPEVLKNEAYNSKSDIWSMGCILYELCCLERPFEGRSLIGLMFKICDEPSPNVGEDFSDDVHDLIQCMLSKDPTKRPSAAEILAMTSIRSRIGSTLQRQNTIDLSKHRNMIARECAKKEGRLVSEPVRDEKPMTPAELLRMRKLARADQEAARRAEEAKRSAVEGQSVAKQRMQQQMQHSPYRYDDSPARPKSAARDRPTSAKKTPATPAQQSGSNAGGGGGGGVGGGVNRLKGALMADAERQGDLDASFSKGARAAAQRDFDEVSSSVAYSVTSSEKERPLPTSSKFSKAREARRAKQQATNFKQDTVESGSDSGDDLVLSVTGGGKSNAKGGVAGANAAAKKGGLGAEAAKKGSSGDRSPRPSARAEKAPPTGSTFASSANSSFGNTDRTIPSDEDMAESYYGTEKFEVISSDGSDDDGVLDSSDATGGDRDEMIAAMNKVLQTNFTKA* # PASA_UPDATE: g2870.t1, single gene model update, valid-1, status:[pasa:asmbl_7663,status:12],[pasa:asmbl_7664,status:12], valid-1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . gene 113 1171 . + . ID=g2870;Name=g2870.t1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . mRNA 113 1171 . + . ID=g2870.t1;Parent=g2870;Name=g2870.t1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . five_prime_UTR 113 177 . + . ID=g2870.t1.utr5p1;Parent=g2870.t1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . exon 113 1171 . + . ID=g2870.t1.exon1;Parent=g2870.t1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . CDS 178 1095 . + 0 ID=cds.g2870.t1;Parent=g2870.t1 NODE_4843_length_1210_cov_219.796_potentialcontaminant . three_prime_UTR 1096 1171 . + . ID=g2870.t1.utr3p1;Parent=g2870.t1 #PROT g2870.t1 g2870 MLSLGPLGRAGTALCRHVHATALASRLVSSHAVPVRCFSSPVAAEGMSPRTEDLIDFLLHSMRDSGSEARVARRIRVEMRTLEELIAAKDEIIKKSEETLKTTLAAKDETLKTTLAAKDETLKKSDETLKTIVAAKDETLKTIVAAKDETLKKSDETLKELKEVVYLHRKEHLQRIGAYHARGVLEDFEKRFGKQRDGGRVEFWTKTLLNSKHLGLLRAFADCSGARKGVDNAILKDKELDKVVKTIVTDISNVYSRLSHDVHNPYGTDDGIPIISTMPETDKCIIKAVCEAMSIKTFDVECSVA* # ORIGINAL: g2301.t1 original gene structure, not modified by PASA NODE_3840_length_2647_cov_22.7414_potentialcontaminant AUGUSTUS gene 517 1509 . + . ID=g2301;Name=g2301.t1 NODE_3840_length_2647_cov_22.7414_potentialcontaminant AUGUSTUS mRNA 517 1509 . + . ID=g2301.t1;Parent=g2301;Name=g2301.t1 NODE_3840_length_2647_cov_22.7414_potentialcontaminant AUGUSTUS exon 517 1509 . + . ID=g2301.t1.exon1;Parent=g2301.t1 NODE_3840_length_2647_cov_22.7414_potentialcontaminant AUGUSTUS CDS 517 1509 . + 0 ID=cds.g2301.t1;Parent=g2301.t1 #PROT g2301.t1 g2301 MNGAELSAKFYEFVDRLGASSSNAMVGEFKSKIHTVTIKRTTTKRSAIANPEYERFEKQLGVLLKDIGADKEVAALMKNAPSRDIFHEETSSAVEAKQIDQTSKPLNTLYIREKDMFKLSGCLDSFTDKRHIMARLGMSHKLGILLYGQPGTGKTSSIMAIATRLHKDIYYVHLHTVKTNDELQMIFDHVNKNCPNGVIVCEDIDAMTSVVHQRTNEPATVAAFTLEYFLNLLQGSLTQDGSIFVATTNHLERLDSAFYRDGRFDIRIELKNCDHYQIQTIYQHMFERTIPENLLKHIPEDAFTPATFIYEIRSYMFRQHTDEEILSKFT* # ORIGINAL: g6470.t1 original gene structure, not modified by PASA NODE_7339_length_447_cov_39.5753 AUGUSTUS gene 143 311 . - . ID=g6470;Name=g6470.t1 NODE_7339_length_447_cov_39.5753 AUGUSTUS mRNA 143 311 . - . ID=g6470.t1;Parent=g6470;Name=g6470.t1 NODE_7339_length_447_cov_39.5753 AUGUSTUS exon 143 311 . - . ID=g6470.t1.exon1;Parent=g6470.t1 NODE_7339_length_447_cov_39.5753 AUGUSTUS CDS 143 311 . - 0 ID=cds.g6470.t1;Parent=g6470.t1 #PROT g6470.t1 g6470 MGNNEFSQLGQQSRQLRPGRIQLLDNLAVRDAACGENHTLILTEDGRVYSWGAGAR # ORIGINAL: g10180.t1 original gene structure, not modified by PASA NODE_4129_length_2144_cov_46.5408 AUGUSTUS gene 1 84 . - . ID=g10180;Name=g10180.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS mRNA 1 84 . - . ID=g10180.t1;Parent=g10180;Name=g10180.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS exon 1 84 . - . ID=g10180.t1.exon1;Parent=g10180.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS CDS 1 84 . - 0 ID=cds.g10180.t1;Parent=g10180.t1 #PROT g10180.t1 g10180 MSGRGKKTAETKAKAKSRSSRAGLQFPV # ORIGINAL: g10181.t1 original gene structure, not modified by PASA NODE_4129_length_2144_cov_46.5408 AUGUSTUS gene 744 1396 . + . ID=g10181;Name=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS mRNA 744 1396 . + . ID=g10181.t1;Parent=g10181;Name=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS exon 744 854 . + . ID=g10181.t1.exon1;Parent=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS CDS 744 854 . + 0 ID=cds.g10181.t1;Parent=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS exon 999 1100 . + . ID=g10181.t1.exon2;Parent=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS CDS 999 1100 . + 0 ID=cds.g10181.t1;Parent=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS exon 1199 1396 . + . ID=g10181.t1.exon3;Parent=g10181.t1 NODE_4129_length_2144_cov_46.5408 AUGUSTUS CDS 1199 1396 . + 0 ID=cds.g10181.t1;Parent=g10181.t1 #PROT g10181.t1 g10181 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* # ORIGINAL: g12968.t1 original gene structure, not modified by PASA NODE_1434_length_11338_cov_41.1543 AUGUSTUS gene 153 10762 . + . ID=g12968;Name=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS mRNA 153 10762 . + . ID=g12968.t1;Parent=g12968;Name=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 153 408 . + . ID=g12968.t1.exon1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 153 408 . + 1 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 627 3503 . + . ID=g12968.t1.exon2;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 627 3503 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 3734 5956 . + . ID=g12968.t1.exon3;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 3734 5956 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 6111 6320 . + . ID=g12968.t1.exon4;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 6111 6320 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 6538 6624 . + . ID=g12968.t1.exon5;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 6538 6624 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 6857 7114 . + . ID=g12968.t1.exon6;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 6857 7114 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 7355 7846 . + . ID=g12968.t1.exon7;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 7355 7846 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 8170 8674 . + . ID=g12968.t1.exon8;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 8170 8674 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 9024 9796 . + . ID=g12968.t1.exon9;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 9024 9796 . + 2 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 10290 10350 . + . ID=g12968.t1.exon10;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 10290 10350 . + 0 ID=cds.g12968.t1;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS exon 10632 10762 . + . ID=g12968.t1.exon11;Parent=g12968.t1 NODE_1434_length_11338_cov_41.1543 AUGUSTUS CDS 10632 10762 . + 2 ID=cds.g12968.t1;Parent=g12968.t1 #PROT g12968.t1 g12968 FAYALSPRTTLNELSLSNAVRDGAKKAPPLFKLDYEEADGAKSLVVDMMGIDFVYNPGCVARVVRFFRLGRGGEAPVKRKKGEKKATPQQEIEADLDWVDVRIDIYAPRLILPSSGGQFSRGRTDGCAVLVVDLGRLAVETEAVGTVNPDDFFTPPSTPPNELADEPVAREAGETLPSARGSTGFSDEGMEAALAMSASKKDRQKPPPGATLARHSVTLSEAQVYIAHCLYAKPSASVTQLQTLQASAVTCPGVSLMRHGHVIDRFTIGISADRSLRPADHSMPRVKVTGSLRGLSVSMHELVLPELAACLARIKPPLPPKKSARNEANDIETYAPSPNTSAVDASNEDGAETDAVSEDDIGDDDVDGSVLADGLSDEEDAPGAAAASSVTLSADAQWVVFAADVRVGSVVVAIVGASNEPVAELNLGGMLARASKTAYKTDVDVSLGALTVMDMSKAVGAEYRHIVECLDEPAHHHPHAGLHAHGGEAHGSQHVHAHTPASPALVKQESASSLRTPSRPAGVPLLHRPSSRDEPRGDRITLFAARLSLLDPAAPDVLSGSAPAVSIDVQTSAVKMVLNSTALSEIARVLATALPASEPEPESQADTHLLTVTQPMRVPTSGVISATANKTTTAKVSPALKKTPHGGFRASAAMGSITVLLVDRHRCKVSQLSVGGAQVTADMDPSRAGGNAQFAGRLGKLVLADLTADGALYREVFATTGDEALEMAASKKKLTTALNGGSEASLKVRMASVRYVHTQRFVCELARWATDMSECAKLLVATRTSNAATVAVETPASSANDASAGVLSEAAHPLNVLKVDVVIAAPTVVVPQSSHSDSLLIASLGRFVLRGTRSSFVHPGDGQDRQGFKLSVDELGLYTRVGSLVKSASAASSVAGGVRDAVAPSVHLAGAARRPSLSMISGVSAQNPKPIIDNVTFHMDISMGSVTAESISTVADGEKRTEGGISDSDRHIPTFEFSGRFSPVRIAISPSVINQVKLTARDQVAEGDSVSVRNGIAPARDVTGGKAVAPVVTTPAKAPSATTKASAASASASSHPPALSKGTFDMPSLSVQLLRTDESTPGAKLAELSLVSVGFTMDAAADATDFLLELKSLRISDHVTSGLSGEQLDILATPSDRSALSVTHTIARRAHPSFQLRHGGVDAKLRAEMSSLSLAVYPRSVAALVAFFGVESADDTDGHDPPDATDGADVSSVPSAASAADHVLDHVLDVGLSMESISLVLGADGGPLARLSGHALAAGMVRSYAGVSVTATLGSVGVDDLAAIAHTFQRVLVSDGEKALSLTFSKPSPDSEGERAAATRGVDGHFFAGKLAVRLASIHYVHTQRFLADVLSFKSALDLAKPAPAVSVKPRPLSQSTSRVQGKTDRVTSAAVATRPDRISAVQLDVHIVSPQVIIPTTSTSLRGLCVRLGTVTISNAIEGGQDEARPVVDEISAGVMNVSVSCVDLEVRDDMCVARKSSGILDEFGFELTIERILEPRSCPDVAPVAVSCFIDAVKGAVDSSHVGMLLHILDGNLAEGNALILQQQQNAAFIQRQMMGRIDADVDAARREASYASDDAVAIGALPTLDLFVDVNALSLSLSDGAEAFGQVELSGFRVTFSTLANTAKSIELSASAFTARDVRPDSANAFRQIVEPRAGKHKEQAVTASPGVTAALNRTHNYASKALPQFQLNFRTRPGDPDMVDIHLDSVRVNVVFDWLSSVLAFALVPLEEAKRRRDGQGANSAWARQQQLQSAQQMRYLTHEQREQIIADRTRRMSQGEQWNMAGKKRKAKNRLLVKVSVTRPEFVVFEDSTRVDSHAIVLRFCAVIKFTETDPSRNDLPAGTSLSAALEELEVFSVRLDKEEDSAVNIVDPFTLSVNVAKEATTRASDPGVAYLDSTVCLAIESTRVRFSHFDFRLLLAITKTLPDGISSLTRQSRAGADAEDSGVGDGVSSASDGKPKDGDELGPSVSIAEARLERLVGLGYSREWCAKALDETGGISDLAAEWLIENAPSIEEERKEQMQRSAAASSSSSANITPTILDNLAQDTAATPVDVVTGRSTLVVSVADFELTLIDDSCGLDVPLARLAVKNCRANATDMSSIEVVVEIVVEHYNGLISVWEPLLEPWDCTIKSSPGRPRAQLRAIEELKGDAPGASSGSSSPSGDSEDDNSQAAKALVMQTSPSLQISLSSEKRFDVNIPQVYLETIARTYRGLALSAKSDERLSRVPFVPYAIVNMTGRRLTFRRHLGPHSDAEEAGVEAGATSSFSFRGIAPSAQRGNRAWTECRLTVSVDGWETTRPVRLVLDISLVDGRKVIEVRSAVVLQSALAIDLDVALEAQETGEKKSVVVKLSAGSHVAVPIECVGWRMRIRPDGKSWDYGWSTTSLHWSDYKDGLRANAMGALVTCPPPFGDRQAFNVSVAVERLAYPKARMGTVLPAHTLTLRPPIIVENLLPCDLHYTIESGRATEQPPLRTGLASVVPGQDKKTTGSNRLGSVAAGLPAGSADNVRGVMLSGTAECVHALPLDALVRISASIEDYTWSPLAVLNSDEPSQDVDSRLKLTDRRSRVLYLHVINRREGYGRWASRHVSIHAPYWMVNKTGLPLTYMQVRRIGHSLACNRT* # PASA_UPDATE: g3128.t1, single gene model update, valid-1, status:[pasa:asmbl_7638,status:12], valid-1 # PASA_UPDATE: g3128.t1.1.5b6be70c, single gene model update, valid-1, status:[pasa:asmbl_7637,status:12], valid-1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . gene 18 1232 . - . ID=g3128;Name=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . mRNA 18 1232 . - . ID=g3128.t1;Parent=g3128;Name=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 933 1232 . - . ID=g3128.t1.exon1;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 933 1232 . - 0 ID=cds.g3128.t1;Parent=g3128.t1;5_prime_partial=true NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 736 846 . - . ID=g3128.t1.exon2;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 736 846 . - 0 ID=cds.g3128.t1;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 509 638 . - . ID=g3128.t1.exon3;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 509 638 . - 0 ID=cds.g3128.t1;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 18 369 . - . ID=g3128.t1.exon4;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 35 369 . - 2 ID=cds.g3128.t1;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . three_prime_UTR 18 34 . - . ID=g3128.t1.utr3p1;Parent=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . mRNA 18 1232 . - . ID=g3128.t1.1.5b6be70c;Parent=g3128;Name=g3128.t1 NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 933 1232 . - . ID=g3128.t1.1.5b6be70c.exon1;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 933 1232 . - 0 ID=cds.g3128.t1.1.5b6be70c;Parent=g3128.t1.1.5b6be70c;5_prime_partial=true NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 796 846 . - . ID=g3128.t1.1.5b6be70c.exon2;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 796 846 . - 0 ID=cds.g3128.t1.1.5b6be70c;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 509 638 . - . ID=g3128.t1.1.5b6be70c.exon3;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 509 638 . - 0 ID=cds.g3128.t1.1.5b6be70c;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . exon 18 369 . - . ID=g3128.t1.1.5b6be70c.exon4;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . CDS 35 369 . - 2 ID=cds.g3128.t1.1.5b6be70c;Parent=g3128.t1.1.5b6be70c NODE_4808_length_1232_cov_184.641_potentialcontaminant . three_prime_UTR 18 34 . - . ID=g3128.t1.1.5b6be70c.utr3p1;Parent=g3128.t1.1.5b6be70c #PROT g3128.t1 g3128 NESRWYGYETLGNLFIALRLEVLNELGSPFAISDLFPGAQFGTSVEWSSHRFQPRSVQATALQVSLRHVLNQDLLRPDEVALCTESETAIDSLCWLPHSTGTGRSLLAVQYKTGTSSVSLGAVEEGILGLIKKLSPGIDVIPVVMTPLTLTDNTAIGDHSVVIEGRNAKSFWGDWGSFVLRVTDLNPNVMSPGEIGERLPSDLFLRADGSLRTACASLIASVTKYDAPWLNAASAERALVGMANSLRGLPTEQQLKVALGKAEFEADKKEAIAKRLHSLSTHGDLQNKWWY* #PROT g3128.t1.1.5b6be70c g3128 NESRWYGYETLGNLFIALRLEVLNELGSPFAISDLFPGAQFGTSVEWSSHRFQPRSVQATALQVSLRHVLNQDLLRPDEVALCTESETAIDSLCWLPHSTGTGRSLLAVQYKTGTSSIDVIPVVMTPLTLTDNTAIGDHSVVIEGRNAKSFWGDWGSFVLRVTDLNPNVMSPGEIGERLPSDLFLRADGSLRTACASLIASVTKYDAPWLNAASAERALVGMANSLRGLPTEQQLKVALGKAEFEADKKEAIAKRLHSLSTHGDLQNKWWY* # ORIGINAL: g286.t1 original gene structure, not modified by PASA NODE_761_length_18041_cov_44.0179 AUGUSTUS gene 958 1686 . + . ID=g286;Name=g286.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS mRNA 958 1686 . + . ID=g286.t1;Parent=g286;Name=g286.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 958 1686 . + . ID=g286.t1.exon1;Parent=g286.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 958 1686 . + 0 ID=cds.g286.t1;Parent=g286.t1 #PROT g286.t1 g286 MPLFELHIGIDTATAGVTNAQMASTEELLHAWCKTHLPAHIKAYWIAITHRANVNGDTRILQTAEYVACPSFDEAMRMLKQRVHSLRAYGLPVMREKIECVAADCSKIAEKPTYFERHVVVRRVGDLPFEAEHALCMHNLARSIDHGGAAPSYKDGIEVRRRYLNQRFATIDALRSAPIPEVPTGYEVTKVIQEGVLFDTFPGVDDYEWAAGQTLANATTQPVDFAMRLKSPTLGVKIAPLA* # ORIGINAL: g290.t1 original gene structure, not modified by PASA NODE_761_length_18041_cov_44.0179 AUGUSTUS gene 12312 13932 . + . ID=g290;Name=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS mRNA 12312 13932 . + . ID=g290.t1;Parent=g290;Name=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 12312 12385 . + . ID=g290.t1.exon1;Parent=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 12312 12385 . + 0 ID=cds.g290.t1;Parent=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 12718 12922 . + . ID=g290.t1.exon2;Parent=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 12718 12922 . + 1 ID=cds.g290.t1;Parent=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 13174 13932 . + . ID=g290.t1.exon3;Parent=g290.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 13174 13932 . + 0 ID=cds.g290.t1;Parent=g290.t1 #PROT g290.t1 g290 MDPRVIDIRARALVRVGGQVRAVTRILGTCSCSVLWLGATCTLPRIPNAPDAIIEHTSPTAITLRLFTETDVFLSACTYRVDRTGLPEVPPAWLRGSFGALYVDNRAIQENNTYTYTVTAFNPADTTNATRSPSIDLPPVSAVRREVPLPPSTINATWVASLRVVHLSWTEDVSSGPIVSTLIRRSDGVVVTLSSTLPQYDDQTVVPGTAYTYTLQSRNAQGLSEASTSVEVQILTTWYGATAQSTSSGGGGIAAIAAGVSVAGVAFIGVSISAAVWYMRQRRKEQMSTLTTGPTRSLGQLRVHENAACTYSREDLRSLDQLSLARGASVEDLRIAIVSPSHTDA* # PASA_UPDATE: g291.t1, single gene model update, valid-1, status:[pasa:asmbl_9248,status:12], valid-1 NODE_761_length_18041_cov_44.0179 . gene 17402 18016 . + . ID=g291;Name=g291.t1 NODE_761_length_18041_cov_44.0179 . mRNA 17402 18016 . + . ID=g291.t1;Parent=g291;Name=g291.t1 NODE_761_length_18041_cov_44.0179 . exon 17402 18016 . + . ID=g291.t1.exon1;Parent=g291.t1 NODE_761_length_18041_cov_44.0179 . CDS 17402 17956 . + 0 ID=cds.g291.t1;Parent=g291.t1 NODE_761_length_18041_cov_44.0179 . three_prime_UTR 17957 18016 . + . ID=g291.t1.utr3p1;Parent=g291.t1 #PROT g291.t1 g291 MCPSCSDGLPCNPVTGACATCPLGHYGSDCSLSCDYCQSRASCDRTTGACICPAGFTGVNCEIDAQRVSGGGGGSGSTPIAVGASVAAIAFVVACICGAFWVVRGHKNEMALRSTGESVSLTASGFENHSTASLDNLDSAPATGGSFNGKEGAQERTDACPAYEFSTEQAGGSGGAFDPTSHYN* # ORIGINAL: g287.t1 original gene structure, not modified by PASA NODE_761_length_18041_cov_44.0179 AUGUSTUS gene 2423 6087 . - . ID=g287;Name=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS mRNA 2423 6087 . - . ID=g287.t1;Parent=g287;Name=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 5934 6087 . - . ID=g287.t1.exon1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 5934 6087 . - 0 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 5576 5658 . - . ID=g287.t1.exon2;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 5576 5658 . - 2 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 5250 5394 . - . ID=g287.t1.exon3;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 5250 5394 . - 0 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 4685 4814 . - . ID=g287.t1.exon4;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 4685 4814 . - 2 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 4168 4254 . - . ID=g287.t1.exon5;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 4168 4254 . - 1 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 3892 4042 . - . ID=g287.t1.exon6;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 3892 4042 . - 1 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 3500 3731 . - . ID=g287.t1.exon7;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 3500 3731 . - 0 ID=cds.g287.t1;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 2423 3297 . - . ID=g287.t1.exon8;Parent=g287.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 2423 3297 . - 2 ID=cds.g287.t1;Parent=g287.t1 #PROT g287.t1 g287 MVAKQKKARIVLEVYRPSHPDGYAPGDVVEGHVLIAKKTTLRSLCVSLVGKDHVHWDRRVEGRVEPVGRTDTIVKEKRQVLIGSEPYAPGSRIPFSIQLPGYLKPSVGVDATNEVGIVTGEIYYYLKVNAGRWSGSTSRIQQPIAVRPIHDEKAYGAGQQPVSVTISKSFFMHFGEIRASITLDRSAIVPGEAIKVHMAIQNETSRKVTLASAEGIRRVILNAGSSLPGVIPDDIRNAPLVVVEGAEALDLKRHQSKDVRFELIWPRCRMEPPHPDGLNHPNAFTIHGARFSVIHEIKVTLRAQSKKKFEDLHGYIPILIVPPFECNREENISCVVPTFLNWNEAFSKRKPITLPHPRYQCQMVCSDRPRPPPKAAPRRPSAYMTNSDILRGGRSEQPMATAPAAMNPYADPSYINGYAPPTNNGMPLPSGGGPAPYAAPPGSVAAALGVGAMQRPVPAPRPPMTRVDTLIDSTPRRYSFADFQMERGATPTQPATRPPPATISAGTSGSVYPSLDSFSPSSTNTPSAFAGGTFPRGRPSVTAMAGTATLPRTTPSRPPPPMMPFRTEMPNAASRSVSASGLGYSASGMYGSPAVPSMPLPSAPPAPTAPPAYALGIF* # ORIGINAL: g288.t1 original gene structure, not modified by PASA NODE_761_length_18041_cov_44.0179 AUGUSTUS gene 6633 7898 . + . ID=g288;Name=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS mRNA 6633 7898 . + . ID=g288.t1;Parent=g288;Name=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 6633 6749 . + . ID=g288.t1.exon1;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 6633 6749 . + 0 ID=cds.g288.t1;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 6970 7045 . + . ID=g288.t1.exon2;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 6970 7045 . + 0 ID=cds.g288.t1;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 7234 7311 . + . ID=g288.t1.exon3;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 7234 7311 . + 2 ID=cds.g288.t1;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 7506 7586 . + . ID=g288.t1.exon4;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 7506 7586 . + 2 ID=cds.g288.t1;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 7813 7898 . + . ID=g288.t1.exon5;Parent=g288.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 7813 7898 . + 2 ID=cds.g288.t1;Parent=g288.t1 #PROT g288.t1 g288 MSHKKAKRSAAPHLDPTKLTDEQAKVELLAEDIITDRRQIIELDRRRNGNREALATYRHGDHKAGSKLYMSIGDMFIKMPVDKAKALIEADQKRIDAEIDSLQKGLRQKAVNLHEMEGRPDMTRGLTLKGLTEAELHSIRPNNLS* # ORIGINAL: g289.t1 original gene structure, not modified by PASA NODE_761_length_18041_cov_44.0179 AUGUSTUS gene 8855 9862 . + . ID=g289;Name=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS mRNA 8855 9862 . + . ID=g289.t1;Parent=g289;Name=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 8855 8937 . + . ID=g289.t1.exon1;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 8855 8937 . + 0 ID=cds.g289.t1;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 9267 9338 . + . ID=g289.t1.exon2;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 9267 9338 . + 1 ID=cds.g289.t1;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 9455 9526 . + . ID=g289.t1.exon3;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 9455 9526 . + 1 ID=cds.g289.t1;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS exon 9733 9862 . + . ID=g289.t1.exon4;Parent=g289.t1 NODE_761_length_18041_cov_44.0179 AUGUSTUS CDS 9733 9862 . + 1 ID=cds.g289.t1;Parent=g289.t1 #PROT g289.t1 g289 MAPCSFEKACTCANGTNVISCAQLPGAVYWNDKGITSIAQGIFDASPTIYLLDLSWNRIERLPPGLIDKLKNLRTFPGRWRSCRDFRAPTRDYRFPAHHCNMLAAVSAAVLFVCSHSN* # ORIGINAL: g9965.t1 original gene structure, not modified by PASA NODE_952_length_15525_cov_41.2061 AUGUSTUS gene 862 1731 . - . ID=g9965;Name=g9965.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS mRNA 862 1731 . - . ID=g9965.t1;Parent=g9965;Name=g9965.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 862 1731 . - . ID=g9965.t1.exon1;Parent=g9965.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 862 1731 . - 0 ID=cds.g9965.t1;Parent=g9965.t1 #PROT g9965.t1 g9965 MVPFLSSRCLASLACVNSRLRRVVSLARLYTLSPAFVKQYCEAASFREAVWAVIPRERLVLNVALTDIYDVSVLSGVRSLNLSFNERLKDVSALGNVHSLILSGCRGVTDVSALGGVYSLSLQECESVTDVSELGGVHSLELSCCKGVTDVSALGGVHTLNLSGCKRVTDVSALGGVHSLTLSCCKGVTYVSVLGGVHTVILSRCEGVTDVSALGGVHTLSRFYSEGVTDVSALGGVHSLYLHCCGGVTDVSALGGVHSLNLSGCKGVTDVSALGGLHSLDLSLCSAWE* # ORIGINAL: g9966.t1 original gene structure, not modified by PASA NODE_952_length_15525_cov_41.2061 AUGUSTUS gene 2447 3331 . - . ID=g9966;Name=g9966.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS mRNA 2447 3331 . - . ID=g9966.t1;Parent=g9966;Name=g9966.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 2447 3331 . - . ID=g9966.t1.exon1;Parent=g9966.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 2447 3331 . - 0 ID=cds.g9966.t1;Parent=g9966.t1 #PROT g9966.t1 g9966 MATKHKYPFEKTGSDTWWVNDVLDLSVSTVAQMLHEGGIPPHMRDYFAHNAQDVDGWPLVGVAMPADKMPDADDRSTPGGVTLRQVNATAYRLAVEQGAVVAKTPAPAPPLRNTLASPMRPVKGGKMRGPRHVARQITSRALFQEDGDVQVDGAASTADTDCAIADTSKTVDVRLSTVSPQSGTPLKSTPRRRRDNAESKSSSSPIPKANSRVSDKDFKYRCGWGYCPCQAAGKGPYEQRQSKCAYYNHERRAFQRAANDGTLFTAGGRQVSIQQLMTLSPEERRKLVRITAPA* # ORIGINAL: g9967.t1 original gene structure, not modified by PASA NODE_952_length_15525_cov_41.2061 AUGUSTUS gene 4088 6629 . + . ID=g9967;Name=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS mRNA 4088 6629 . + . ID=g9967.t1;Parent=g9967;Name=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 4088 4134 . + . ID=g9967.t1.exon1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 4088 4134 . + 0 ID=cds.g9967.t1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 4278 4535 . + . ID=g9967.t1.exon2;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 4278 4535 . + 1 ID=cds.g9967.t1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 4675 5459 . + . ID=g9967.t1.exon3;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 4675 5459 . + 1 ID=cds.g9967.t1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 5628 5820 . + . ID=g9967.t1.exon4;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 5628 5820 . + 2 ID=cds.g9967.t1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 6137 6207 . + . ID=g9967.t1.exon5;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 6137 6207 . + 1 ID=cds.g9967.t1;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS exon 6502 6629 . + . ID=g9967.t1.exon6;Parent=g9967.t1 NODE_952_length_15525_cov_41.2061 AUGUSTUS CDS 6502 6629 . + 2 ID=cds.g9967.t1;Parent=g9967.t1 #PROT g9967.t1 g9967 MCVTSNKFAETSSKTNSTLVDAAGDAGACVVVYVDATTGNDNNSGTTPQAAFRTLSRAFEEEPTDTHECIEARISGSVTDAVDVDCRLSTHLRQVAIRSGEGAADVSASRLAFYGCDVTFDGVVFASEVSVFAYGGALHLSTTRATASSFSASAFGANITVSDSSFSECRPSIGASSLFSSTSLNTGSADPRQAVTIFNTTIHGITGSFLRSFGSHVALDRVRLTSVISQSSPLVASASIIEMRNISFHNCTGTSSGGALLLSSSSARVLASTFDGNACIGGCNGGAFKVDGTSQLSFSGCRFQSNVAAAGPAIHADNGGKVLVSASVFACNSADSYGVHAVAAVVEGSVLSLTNCTETQECESYCPPGHVKAAPSLCIPCSPGSFNPVTVANTVVECTLCPLGHYAIASRATTCDPCDEDHYADSVGSSSCTSCNNALFSADPGASDCWKVNTFLAVMIAVSSSLILVPMAILRVRRTRLFRKKFPKPSKDS* # PASA_UPDATE: g9968.t1, single gene model update, valid-1, status:[pasa:asmbl_10102,status:12], valid-1 NODE_952_length_15525_cov_41.2061 . gene 7611 12504 . + . ID=g9968;Name=g9968.t1 NODE_952_length_15525_cov_41.2061 . mRNA 7611 12504 . + . ID=g9968.t1;Parent=g9968;Name=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 7611 7790 . + . ID=g9968.t1.exon1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 7611 7790 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 8147 8287 . + . ID=g9968.t1.exon2;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 8147 8287 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 8513 8700 . + . ID=g9968.t1.exon3;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 8513 8700 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 9183 9411 . + . ID=g9968.t1.exon4;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 9183 9411 . + 1 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 9670 9770 . + . ID=g9968.t1.exon5;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 9670 9770 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 10036 10144 . + . ID=g9968.t1.exon6;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 10036 10144 . + 1 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 10456 10554 . + . ID=g9968.t1.exon7;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 10456 10554 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 10819 10918 . + . ID=g9968.t1.exon8;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 10819 10918 . + 0 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 11085 11403 . + . ID=g9968.t1.exon9;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 11085 11403 . + 2 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 11673 11890 . + . ID=g9968.t1.exon10;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 11673 11890 . + 1 ID=cds.g9968.t1;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . exon 12143 12504 . + . ID=g9968.t1.exon11;Parent=g9968.t1 NODE_952_length_15525_cov_41.2061 . CDS 12143 12504 . + 2 ID=cds.g9968.t1;Parent=g9968.t1 #PROT g9968.t1 g9968 MAQRSTKVAIKHEKNPAIFYEFDHKQSLTQIVRDVCMRFSVAAEQYALYCEDSGLFLTEENRTVRDGMVLELKLPPGKEAAHVIETLKSADDATKKKAMFDLRNQLKQSEFCAEFERLGGIGQLVAVIESTSGGTLGYALMSFRELMDHGTEEWSVLSDTFVKKASGSVFALAIAERLIDSPRYGFERVFVSLPLDLLVQSLESADVGVQQNAMALVTSVLETCPISRLADILGRFNALGLRKALLTLLRGAGGVNDELGHQLYVIQTIMLNIAQERRNRRFDRAQGHQELVAELFKIAFPDSTDSSMQGTKLGFSNPDVSTHFSEPPGILALECMLFVAKKYQEVFRKLALEQTGRADVPFGVASIALTNVLCEVLNVGGPSSEHSTAFEPMLFSCDNAFEEFFGVCVQLLHRTWREMDAGTNDLAKVLVIVRKQIDTVMNTGVDRKPQTMDSFKNAVFGLTYKAILAQQEKEMAGKESFHAKAEPVKHLREKVGKENLIIISEQRIAYLLEGDFFPKYGPKGRVKGTRWYCRLSPNRKILHYGDAIEGQIPTLESLSEKVILADVKAIVKGADCPLLAKMKKFDNETASLAFSLLLPSEESLDFVAASRQQYAVWLDALRVLSKQGDPDNQLTVQDLELLSSIDMRIRLLEAENVHIPDKAPPVPPPPSDFGFAFPSLV* # PASA_UPDATE: g13198.t1, single gene model update, valid-1, status:[pasa:asmbl_3189,status:12],[pasa:asmbl_3190,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 1406 8182 . + . ID=g13198;Name=g13198.t1 NODE_19_length_65195_cov_41.1962 . mRNA 1406 8182 . + . ID=g13198.t1;Parent=g13198;Name=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 1406 2623 . + . ID=g13198.t1.exon1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 1406 2623 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 2739 2868 . + . ID=g13198.t1.exon2;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 2739 2868 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 2961 3106 . + . ID=g13198.t1.exon3;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 2961 3106 . + 2 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 3268 3312 . + . ID=g13198.t1.exon4;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 3268 3312 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 3426 3532 . + . ID=g13198.t1.exon5;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 3426 3532 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 3698 3864 . + . ID=g13198.t1.exon6;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 3698 3864 . + 1 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 4003 4081 . + . ID=g13198.t1.exon7;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 4003 4081 . + 2 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 4264 4288 . + . ID=g13198.t1.exon8;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 4264 4288 . + 1 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 4491 4565 . + . ID=g13198.t1.exon9;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 4491 4565 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 4688 4990 . + . ID=g13198.t1.exon10;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 4688 4990 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 5108 5413 . + . ID=g13198.t1.exon11;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 5108 5413 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 5623 5976 . + . ID=g13198.t1.exon12;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 5623 5976 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 6078 6266 . + . ID=g13198.t1.exon13;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 6078 6266 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 6438 6592 . + . ID=g13198.t1.exon14;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 6438 6592 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 6775 6829 . + . ID=g13198.t1.exon15;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 6775 6829 . + 1 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 6968 7096 . + . ID=g13198.t1.exon16;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 6968 7096 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 7264 7794 . + . ID=g13198.t1.exon17;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 7264 7794 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . exon 7952 8182 . + . ID=g13198.t1.exon18;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . CDS 7952 8140 . + 0 ID=cds.g13198.t1;Parent=g13198.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 8141 8182 . + . ID=g13198.t1.utr3p1;Parent=g13198.t1 #PROT g13198.t1 g13198 MEDCAAAMPPSGGGGGATPNAAGGSGGVDVFRLEATVEAGASAGASAFVSASLILSTELTVAEVLAEAALHAVPGASEDDYVMLVRTGGVDAADCALLEADTRQFTTCDPSVVSAVASFAAVRVVLRRRDSSHHAHAVGHSQLGAFALQGRPIRLYFQRSLECIGVIGADDGSQATDAATCPSAKSVVVSALSRLVRAGLVPAHSGADAVMSISSASVVCEDGTPVELEASLSECAYVQECLSRNATPLLFVTVPALAEEAASKSDSEGDADGVLPAAGGLAAVMAQQGSRRGSSNVRGLAARARRLSKADALLQSTALSVSMGGGSVGAAGARKESVALAIPLSPREVRESAEADDGDEREGASVGGLLQIPSPDGDAADDEEPGSATGVLLRVPSADGPGADKKVVKRRRKHTNQRPMSRVAGFSPVAAMSIEFVLPNGFIVSLPCPGDRTVSQTKASVWDHAKATGHDSNLKQHDLYVLKYVKDGRAFELYDEEQPSLKVSLKKASAGKKEKMLDMKIGDLIGYGLYQYGFLKNDEVDTIRRKLASVRQQAVQGRDLQQYIMEPSVTSQPIPPHIRAKMPGDKIQMRVHFGTEFSKTVLPSTTSKPAEVLASIFTKQNLARMNLPPESKPDDFILKEEPIDLTAVAVADLKCEAEIDDDEEDDLIDDSSMTGTHEQLTARGREHTQIATTSLWDIARRFRVRILGVDSLNTGNVQAIYVEAGIYHGGQLMAPVLKTSQVASSENPRWSEWLVFDIATYNIPRASRLCVTVYGRWNARKKMAEDKEDDLYPLGWVSTLLMNYKGFLRAGVAKLHLWAGEKANPIGTTVANPKQNESAAVYLEFDTHRHPVAFPTEKYANVYKDLEVPAPPDESDNRRLEVLMSSDPLTRLDRNDDKLLWLYRYYCMRRPEALPKFLLAVRWNEMEHVKEVHRMLLAWAPLPPDAALELLDANFADERVRAYAVERLDVLSNDELSDFLLQLVQVLKYEPYHDSALARFLLKRALKNRRIGHSFFWYLRSEMQTPEISQRFGLLLEAYVRGCGSVVMDELMREATALNKLVKIANAIKTVKGAERKEVLRQKLAEAQLPESFSLAYNPNLVVGNIKVEKCKYMDSKKLPLWLVFENADSSATRPVYIIFKSGDDLRQDMLTLQMLQIMDKLWQANNLDFRMLPYGCISTGNEVGMIEVVLNAETVANIQQAKGGAMASFKDEILRDWLRAQNPNDKDFDKAVQTFTLSCAGYCVATYVLGIGDRHNDNIMVTKSGHLFHIDFGHFLGNFKSKFGVKRERAPFVLTPDFVFVMGRRDGEQFAKFQEYCCQAYLILRRHANMLINLFAMMLSTGIPELKSVEDIYYLRDALCLGMTEEQAANSFKDLIFECLRLSWSTQLNWAIHNLAHSK* # PASA_UPDATE: g13215.t1, single gene model update, valid-1, status:[pasa:asmbl_3203,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 61113 64563 . - . ID=g13215;Name=g13215.t1 NODE_19_length_65195_cov_41.1962 . mRNA 61113 64563 . - . ID=g13215.t1;Parent=g13215;Name=g13215.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 64397 64563 . - . ID=g13215.t1.utr5p1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 63964 64563 . - . ID=g13215.t1.exon1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 63964 64396 . - 0 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 63641 63706 . - . ID=g13215.t1.exon2;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 63641 63706 . - 2 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 63276 63481 . - . ID=g13215.t1.exon3;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 63276 63481 . - 2 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 62880 63031 . - . ID=g13215.t1.exon4;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 62880 63031 . - 0 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 62440 62645 . - . ID=g13215.t1.exon5;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 62440 62645 . - 1 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 61992 62159 . - . ID=g13215.t1.exon6;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 61992 62159 . - 2 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 61534 61776 . - . ID=g13215.t1.exon7;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 61534 61776 . - 2 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . exon 61113 61252 . - . ID=g13215.t1.exon8;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . CDS 61149 61252 . - 2 ID=cds.g13215.t1;Parent=g13215.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 61113 61148 . - . ID=g13215.t1.utr3p1;Parent=g13215.t1 #PROT g13215.t1 g13215 MEATPAMAGLRGKASETVETVKALSNETVETVKAIFKSKDDSPASSAQKWRPSVVGEALRQYAMEMLRDSLGADALVGTAGIIVANVALKSLVWLFEVCGTFIVSRTTVTATFESGDSAHEWILNWLAMHPYTKTATEVVVSSRLKRGETLQQGSSGTVIDFTPAPGTHFIRVGCKIGMLTRERKKNEIGKDKVEKISITLLGRSREPIDLLVRDALEKQMARDKHLTVIFTGDQYGTWQRSRVRPIRPLSSVILQGSLEEELSADIREFFESEAWYLDRGIPFRRGYLLYGPPGNGKTSLVAALAGFMGINIHVLSLANPSLSDENVMDLLNETPQRCVLLLEDIDHAFARMSDADGGEGSTVLASSKVTFAGLLNALDGVAAQEGRLLILTTNHAERLSPVLLRPGRVDVRVHIGNASESQMRRMFLRFYGAHTDVDASTLATNFVAGLPGASEAGARLIFGEHSDGKPTTLFKCGDDSVKGISMARLQGHFMKYKRDPVAAVANKFELLGISPLPPQASAQE* # PASA_UPDATE: g13204.t1, single gene model update, valid-1, status:[pasa:asmbl_3191,status:3], valid-1 NODE_19_length_65195_cov_41.1962 . gene 26447 27217 . + . ID=g13204;Name=g13204.t1 NODE_19_length_65195_cov_41.1962 . mRNA 26447 27217 . + . ID=g13204.t1;Parent=g13204;Name=g13204.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 26447 26527 . + . ID=g13204.t1.utr5p1;Parent=g13204.t1 NODE_19_length_65195_cov_41.1962 . exon 26447 26801 . + . ID=g13204.t1.exon1;Parent=g13204.t1 NODE_19_length_65195_cov_41.1962 . CDS 26528 26801 . + 0 ID=cds.g13204.t1;Parent=g13204.t1 NODE_19_length_65195_cov_41.1962 . exon 26911 27217 . + . ID=g13204.t1.exon2;Parent=g13204.t1 NODE_19_length_65195_cov_41.1962 . CDS 26911 27146 . + 2 ID=cds.g13204.t1;Parent=g13204.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 27147 27217 . + . ID=g13204.t1.utr3p1;Parent=g13204.t1 #PROT g13204.t1 g13204 MGRRQIGDDSGAFDPTVNSHLRLLEHIAIKGFQAGAVLAVPLVPLALKIRRRPVTLAAVTAGAAGFALIGTAASAAAGLAKMRTMDTDGVTDRVYRLHYNDGQVRTDRFARAGAGIGAAVLTAATVAGFSASLPVALLGGAAIGSAVGIAAHVATSGQIASARNVTKEL* # ORIGINAL: g13205.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 27489 31243 . - . ID=g13205;Name=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 27489 31243 . - . ID=g13205.t1;Parent=g13205;Name=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 28391 31243 . - . ID=g13205.t1.exon1;Parent=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 28391 31243 . - 0 ID=cds.g13205.t1;Parent=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 27960 28121 . - . ID=g13205.t1.exon2;Parent=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 27960 28121 . - 0 ID=cds.g13205.t1;Parent=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 27489 27815 . - . ID=g13205.t1.exon3;Parent=g13205.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 27489 27815 . - 0 ID=cds.g13205.t1;Parent=g13205.t1 #PROT g13205.t1 g13205 MDDKALNTWVSDRLMELVGMSEKYAVQFVVGLAKGAKSADALVEKLKSTDTIPADAKGIAFARELFQRMPRAGGRSAADERRSAAKAEEARIRDVYKKNQAYKMLDDDEDDDAAAVAAAAARSLAKKAAKAEKKLEAKGEAAADGKDDRKRKHIRKKTEGFADEEEPDTPGDTQHASKRQRTDEDAPPSGGAEDDLERLEREREEDLAARDAFAARMKSKDRERTKKPVESKAAEDARLKQEMAEEEKRRLIPELRKKARQRYLGERKDKKLAELRDDIRDEEYLFASEELTAREKEELEYKRRLYDLAMEHAKAGEMEKVDRYQMPQSYVDEGGRMDAKKREELLTRRDKGGKEDDNEKYGFVTEQARWEEEQMRGATMQFGAKDAKEKAREKGDAADYGYVFEDKIDFIMAETVAGTNKKKVEEERAVSEAERRKMTMDETRKSLPMYPYRDELLQAIENHQVLIICAETGSGKTTQIPQYLHEIGYTKRGKVGCTQPRRVAAMSVAARVSDEMGTKLGNEVGYSIRFEDCTSDRTVIKYMTDGMLLREFLSEPDLGSYSVMIIDEAHERTLHTDVLFGLVKDIARFRTDLKLIISSATLDAEKFSRYFDDAPIFNVPGRRFPVDIYYTKAPESDYLDAAVVTVLQIHLTQPPGDVLVFLTGQEEIDTAHEILQERARRLGSKISELILAPIYSTLPSDMQAKIFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFSKQKSYNPRTGMESLIVTPVSRASAQQRAGRAGRVSAGKCFRLYTAWAFHNELEESTIPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPAETLIRALEQLYALGALNDRGELTKLGRRMAEFPVDPMMSKMILASEQYGCSEEILSIACMLSVGNSIFYRPKDKAVHADNARVNFFVPGGDHLTLLNVYRQWMETDFSTQWCFENFIQHRSMKRARDVREQLAGLMERVEIEPTTTQDVIVIRKAITAGFFYHTARLGKGGQLLTCLLMFGGFCVCGGNGMVTCAAQYKTVKHSQAVQVHPNSSLFQATPQPRWVIYHELVFTTKEFMRQTIEIQAPWLLEVAPHYYKAKELEEGGGLGKKMPKTVGFVS* # PASA_UPDATE: g13203.t1, single gene model update, valid-1, status:[pasa:asmbl_3199,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 23619 26098 . - . ID=g13203;Name=g13203.t1 NODE_19_length_65195_cov_41.1962 . mRNA 23619 26098 . - . ID=g13203.t1;Parent=g13203;Name=g13203.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 26031 26098 . - . ID=g13203.t1.utr5p1;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . exon 25989 26098 . - . ID=g13203.t1.exon1;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . CDS 25989 26030 . - 0 ID=cds.g13203.t1;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . exon 25753 25836 . - . ID=g13203.t1.exon2;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . CDS 25753 25836 . - 0 ID=cds.g13203.t1;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . exon 23619 25490 . - . ID=g13203.t1.exon3;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . CDS 23691 25490 . - 0 ID=cds.g13203.t1;Parent=g13203.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 23619 23690 . - . ID=g13203.t1.utr3p1;Parent=g13203.t1 #PROT g13203.t1 g13203 MLAVRARGPTSLATGLKRCYSSATGPEGRYIQKGVVPTFHYQPSLPRLPIPKLEETLSRYVAAVQPLVTPEEFKATTAAVDSFRATDGPRLHAALVDRDANNKRTSYISAPWFDMYLESRAPLPINFNPFIAFQDDPIPARNTQAARAANLILASVRFRNSLADQVLEPDVFHLNPEKSDTPLFKNLIRFVPSSVSWFGAYMVNAYPLDMSQYHRLFASTRVPRKGKDELVSNKDATHVAIMRRGHVYTFDVMAKDGTPFSAGVIRDNIDAILKDNIAPAEHPIGLLTTEERDTWAAHREQLAAANPEQMKALDGALFVVSLDDESPTKDTDLSRLLLTSDGKNRWFDKSFSMLISGNGKAAINFEHAWGDGVAVLRYFNEIHRDATTVLGEPTPAGSGAKPRRLDFNVPDSVREGIRVAGKKFDAIVNSLDIKTLEYFGFGKAAVKGHKLSPDGVTQMAFQLAYYLHEGRTVSTYESCSTAAFKHGRTECIRSATSESVDFVRAITSTTSSSADRLAALRKAVEKHSELTKNAAMGKAVDRHLYAMLDMTRRAGEPTPLIFKDKGYATMGQNILSTSTLASPALLVGGFGPVHPEGYGVGYMIDDKRIGCHVTSFRKDTPEFLQSLHKAIELIRATVEAK* # PASA_UPDATE: g13212.t1, single gene model update, valid-1, status:[pasa:asmbl_3193,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 54358 56020 . + . ID=g13212;Name=g13212.t1 NODE_19_length_65195_cov_41.1962 . mRNA 54358 56020 . + . ID=g13212.t1;Parent=g13212;Name=g13212.t1 NODE_19_length_65195_cov_41.1962 . exon 54358 54651 . + . ID=g13212.t1.exon1;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . CDS 54358 54651 . + 0 ID=cds.g13212.t1;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . exon 54873 55436 . + . ID=g13212.t1.exon2;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . CDS 54873 55301 . + 0 ID=cds.g13212.t1;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . exon 55647 56020 . + . ID=g13212.t1.exon3;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 55302 55436 . + . ID=g13212.t1.utr3p1;Parent=g13212.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 55647 56020 . + . ID=g13212.t1.utr3p2;Parent=g13212.t1 #PROT g13212.t1 g13212 MSRLTFIQVLFGLRNPSSVLSERTIARYAMAAPEMASLKKGLRKTVLSNLRAISPEQRAVESHRVLQHLKASPWYLNSQHISVFVGLNDEVDTLPIIEDIFARGRACYIPRYDGAHMTMLRVHNMDDLHSLPRTKWNIPQPASPDGRDDPVTRGTLDLVLTPGVAFTRGCDRLGRGAGYYDKYFESMRASFAARGIRSPSLVALALSPQIVDSIPTTPKDVRLDAVITPDGILDAGGISP* # PASA_UPDATE: g13214.t1, single gene model update, valid-1, status:[pasa:asmbl_3194,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 58101 60805 . + . ID=g13214;Name=g13214.t1 NODE_19_length_65195_cov_41.1962 . mRNA 58101 60805 . + . ID=g13214.t1;Parent=g13214;Name=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 58101 58143 . + . ID=g13214.t1.exon1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 58101 58143 . + 0 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 58355 58537 . + . ID=g13214.t1.exon2;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 58355 58537 . + 2 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 58673 58791 . + . ID=g13214.t1.exon3;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 58673 58791 . + 2 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 58938 59043 . + . ID=g13214.t1.exon4;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 58938 59043 . + 0 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 59305 59485 . + . ID=g13214.t1.exon5;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 59305 59485 . + 2 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 59665 59743 . + . ID=g13214.t1.exon6;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 59665 59743 . + 1 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 59873 59999 . + . ID=g13214.t1.exon7;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 59873 59999 . + 0 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . exon 60230 60805 . + . ID=g13214.t1.exon8;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . CDS 60230 60393 . + 2 ID=cds.g13214.t1;Parent=g13214.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 60394 60805 . + . ID=g13214.t1.utr3p1;Parent=g13214.t1 #PROT g13214.t1 g13214 MAESTPVLPGKVNLDQPRYDQSTYWGRVQHFRDVTDIRTLFVTDAQLETAKRIVADYKAGKSVSVTENELWDAKKVIDSTIHPDTGDKILLPFRMSSFVPTNLLVTAGMLFPDPSVRATVFWQWTNQSINVGFNYCNANKTTAMDMKEILTAYAGAVSTSCAVALGLNYLVKDVNSATPGFRGVAKKLIPFAAVAAAGIANVFLMRGKEIRDGITVFDEDGNAVGKSKKAGFDAISQVAVSRVLCAIPPMTLPPLLLMPLERRFAIFRQKPLLLIPLQMAIIASSVTLALPMAIAAFPQYVTAPASSFEPEFHNLINKTTGKPVKTLTYNKGL* # PASA_UPDATE: g13209.t1, single gene model update, valid-1, status:[pasa:asmbl_3201,status:3], valid-1 NODE_19_length_65195_cov_41.1962 . gene 45128 47330 . - . ID=g13209;Name=g13209.t1 NODE_19_length_65195_cov_41.1962 . mRNA 45128 47330 . - . ID=g13209.t1;Parent=g13209;Name=g13209.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 47129 47330 . - . ID=g13209.t1.utr5p1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . exon 46445 47330 . - . ID=g13209.t1.exon1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . CDS 46445 47128 . - 0 ID=cds.g13209.t1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . exon 46003 46080 . - . ID=g13209.t1.exon2;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . CDS 46003 46080 . - 0 ID=cds.g13209.t1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . exon 45826 45900 . - . ID=g13209.t1.exon3;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . CDS 45826 45900 . - 0 ID=cds.g13209.t1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . exon 45128 45569 . - . ID=g13209.t1.exon4;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . CDS 45405 45569 . - 0 ID=cds.g13209.t1;Parent=g13209.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 45128 45404 . - . ID=g13209.t1.utr3p1;Parent=g13209.t1 #PROT g13209.t1 g13209 MAAKTCEGTDISTAQSIASSLLTNLSRAAVFRKELFKDIDVEGTKADFTEFLNNLIASNVEADIGVVPFLDREMLMFAEKKKTTLNKMAGRLSTGAQNQKVKDLAVELRAETWPLVQRDKLARSLIKRFGRAGTDFCGEVLPNDDLAIKHKLECGFRPIPCNNDGCGEAFAANLAHAHDALCLYKIVSCAQMCPLELRRIDMQSHFDTTCPNTAVPCFFGDSLGCCEPVTRGTYDSHLKDRTHQHLVLLLKKFQDQQQVVTALAAFNARLATQIDAVVMEQNADRRQFENFKSDYYKQRDNLESSINSLRKDHGTHKKELTRIGKVISPLDKK* # PASA_UPDATE: g13200.t1, single gene model update, valid-1, status:[pasa:asmbl_3195,status:12],[pasa:asmbl_3204,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 12987 15610 . - . ID=g13200;Name=g13200.t1 NODE_19_length_65195_cov_41.1962 . mRNA 12987 15610 . - . ID=g13200.t1;Parent=g13200;Name=g13200.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 15551 15610 . - . ID=g13200.t1.utr5p1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 14980 15610 . - . ID=g13200.t1.exon1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 14980 15550 . - 0 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 14550 14822 . - . ID=g13200.t1.exon2;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 14550 14822 . - 2 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 14139 14399 . - . ID=g13200.t1.exon3;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 14139 14399 . - 2 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 13595 13963 . - . ID=g13200.t1.exon4;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 13595 13963 . - 2 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 13442 13489 . - . ID=g13200.t1.exon5;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 13442 13489 . - 2 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . exon 12987 13308 . - . ID=g13200.t1.exon6;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . CDS 13064 13308 . - 2 ID=cds.g13200.t1;Parent=g13200.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 12987 13063 . - . ID=g13200.t1.utr3p1;Parent=g13200.t1 #PROT g13200.t1 g13200 MRVLCLVLAATVASLVSVASAAPVLSVRDKLLLVCAQDCQLDPQCIPGCLANGPSRLPASALAEFSQTLDSATTLPTEVTSALADLRTKFPQTGNEATLPSGPVAPAPVTPGGSSDPWAKFTGVTDTAKVVVCAPPCGGVDECTKNCFFNGPSGGASEVQARIDLFTSSTLPSDVIASISDILSRINPNGGSSSGPSAPTAPIRGWTQYGDVEARFKVVVCGQACNGDVPCIRKCFSDGPAQDATALLAQLRSATLPTDVLANVDDILRQITSDGSKGGSEAPVPPAPATDKWSAYGDVSDSFKIVVCGSRCQGDIACVRDCFYNGPAAPVEEIKAMLGGIQSAKLPDDVVANIKLMLSQVIAAGRPTGSGGASTPGTSGSDSGAWAKYGNVSPLFRAIICGTACNAEIACTRTCFNNGAASLSEDQVNVYLGQLRSASLPEDVVATATTLLNSISGVSTGGSTGGSTGGSTGGSTGTKGDNTGDNTGASTGGNADAPAVSYDEGSSEPASGTRGDFSWWTDKDIRERVLVCMHDCSPDNYPCLKLCAYRGPINLTRTQINEILSGFVGASDDAIKQLDGVVWRVNSL* # ORIGINAL: g13207.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 36413 39867 . - . ID=g13207;Name=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 36413 39867 . - . ID=g13207.t1;Parent=g13207;Name=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 39247 39867 . - . ID=g13207.t1.exon1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 39247 39867 . - 0 ID=cds.g13207.t1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 38756 39021 . - . ID=g13207.t1.exon2;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 38756 39021 . - 0 ID=cds.g13207.t1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 37313 38589 . - . ID=g13207.t1.exon3;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 37313 38589 . - 1 ID=cds.g13207.t1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 37077 37154 . - . ID=g13207.t1.exon4;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 37077 37154 . - 2 ID=cds.g13207.t1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 36718 36916 . - . ID=g13207.t1.exon5;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 36718 36916 . - 2 ID=cds.g13207.t1;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 36413 36545 . - . ID=g13207.t1.exon6;Parent=g13207.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 36413 36545 . - 1 ID=cds.g13207.t1;Parent=g13207.t1 #PROT g13207.t1 g13207 MFKNEYQGGPSVEVFSAQGSNPAANWKLAGAPAIKRVFSSDVKSHVYNVEGGTTVKMSLPKDDTKTLCLTQRFFVLQIFVPQGQPFAIELGVSDLGGSRRRLFLSSAHTEVTVTPLHARIPLAPLRRGVWLNLALDVASLVADSFRGQTYRAVETIVIAANCRLRKIFTMKNQPPDDDYPGGGPSTATVEVVPRAYALHPDVHVATVVLTMHRIHEACARGPDGARKPSLVSPDDHHSRGTPTDDPLMLSSASQGSMAARKPLKGAPSSATASSSAAAREASRTAHAAGKDSVDQGSAGASVTAQQRSSRLAQARARSRESLANAAAHRSTSATSSNGDLQEIVIPNGATTASSAAAGGAGAKRPTSARRLSDAGKNGKRSSSPSKAVSGATAADDGPLPSASVFASRGSNNGMRRSVTSSQRGSGDSGRSAASRSSGGAAVAKGAGPDEDRGSVYLYSSHPHAPPPRNISPGTRQASIEGRSRSRPPSESLEDGVGMRRDLDDNDFSAGSGDETRASRDSGISVATNAGGTATASAHGQPQAQAQPLHMQKAARGKTPTQRDARVLVDESCSPIPSRTQGASGAGASKKYDAFRYQSNPNPALKSAAGNGFPSGRSSRQQARPSSKASIASVASYVPQRDNDDGDQYDSDGGLRASFFAGSSVASSMALNGSHGSLGNALLAGHLPRAGRLAPKSRGAANESRASHRSSRTNASSDEDGGDGRTSRDDDETGHFFENSPLVTLNDHGDDEWSHRRHHMASGPAHTDDGDYGDGDTERGDGSFSPPVVPPSARLQSQHSIYGDEDEHQRSLGHSGKLSNFGGGDGGEGSSEEELDLLYDPMLNCYYDPRTNKYYELA* # ORIGINAL: g13199.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 8270 12705 . - . ID=g13199;Name=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 8270 12705 . - . ID=g13199.t1;Parent=g13199;Name=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 12533 12705 . - . ID=g13199.t1.exon1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 12533 12705 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 12314 12350 . - . ID=g13199.t1.exon2;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 12314 12350 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 12136 12206 . - . ID=g13199.t1.exon3;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 12136 12206 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 11942 12025 . - . ID=g13199.t1.exon4;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 11942 12025 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 11683 11794 . - . ID=g13199.t1.exon5;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 11683 11794 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 11338 11514 . - . ID=g13199.t1.exon6;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 11338 11514 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 11142 11205 . - . ID=g13199.t1.exon7;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 11142 11205 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 10937 11000 . - . ID=g13199.t1.exon8;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 10937 11000 . - 2 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 10352 10477 . - . ID=g13199.t1.exon9;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 10352 10477 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 10011 10188 . - . ID=g13199.t1.exon10;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 10011 10188 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 9692 9844 . - . ID=g13199.t1.exon11;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 9692 9844 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 9395 9494 . - . ID=g13199.t1.exon12;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 9395 9494 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 9180 9309 . - . ID=g13199.t1.exon13;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 9180 9309 . - 2 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 8990 9065 . - . ID=g13199.t1.exon14;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 8990 9065 . - 1 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 8722 8817 . - . ID=g13199.t1.exon15;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 8722 8817 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 8270 8407 . - . ID=g13199.t1.exon16;Parent=g13199.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 8270 8407 . - 0 ID=cds.g13199.t1;Parent=g13199.t1 #PROT g13199.t1 g13199 MDGSALADALRSLGCAGPHVTGDALDWAFEDEATAHFVGWLSRSSRAMAVLSPEDIAAFRQLEDEDKVLLGAELDEAVESARHFKTGESAATTSADLESDREELDSASRRLHDLIAQRDRLSVHLAATHQRTTACRRAEALASEGARSAVASAAARIGAYDASVECLAQAALSVTSAHVTSDGRPSVLASAASLAEYDRHESAFSGELKAYMRRQFVQGIAGMIGAAADGLPQTKASVHAIANGDAPDAENAAELQRLQVALATAERDNILASAALSRTEAQIERAQAILNMLDADGRARAAGVTEDVFARLEAAREQFGLAVMQVESTSECVNDLSLLDVVGGDCDIQVHRQQYYSEKQDRVIEHLTAQQARRELLLMATRCAKGRAEGLTLALHAAHRDLAALAGDCKARAAAMASEHFVVQPKRQTIDERDSVVVAVKCVVESDAEAQFTAWQDVLKDTLNLSETVDILIRAADDLDARHHTMTESTSAVVQTLTEVLFPSSAVGKLQLTPTDMDARLAELDRTLADLAKAVDGIIQDKERKMQAASDRTTSRAQHSLFVSFFNDPGRMRKHVSDLQARVDALRLKGTA* # ORIGINAL: g13201.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 15966 16589 . + . ID=g13201;Name=g13201.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 15966 16589 . + . ID=g13201.t1;Parent=g13201;Name=g13201.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 15966 16589 . + . ID=g13201.t1.exon1;Parent=g13201.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 15966 16589 . + 0 ID=cds.g13201.t1;Parent=g13201.t1 #PROT g13201.t1 g13201 MSLVSALKRSCVHPLRGALCASRRPLSTGTAPATAPPTAPPTAPPTAADPRKTPPPSGCEGFVHVYRSPLGDAVRRLKLFSLTSCACTTIAGPVLALVGSEGVPLAGKIAITSTVVLFGLGTTALLHWTTKPFVRRMYSSPDGGIVAAETFNVIAQPIVTKFARSDMQVSRKFMPFVSFEAAGRPFFVQKEGLLDKAFGNSVSKFVK* # PASA_UPDATE: g13208.t1, single gene model update, valid-1, status:[pasa:asmbl_3192,status:3], valid-1 NODE_19_length_65195_cov_41.1962 . gene 42159 44857 . + . ID=g13208;Name=g13208.t1 NODE_19_length_65195_cov_41.1962 . mRNA 42159 44857 . + . ID=g13208.t1;Parent=g13208;Name=g13208.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 42159 42220 . + . ID=g13208.t1.utr5p1;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . exon 42159 42261 . + . ID=g13208.t1.exon1;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . CDS 42221 42261 . + 0 ID=cds.g13208.t1;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . exon 42802 43562 . + . ID=g13208.t1.exon2;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . CDS 42802 43562 . + 1 ID=cds.g13208.t1;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . exon 44025 44857 . + . ID=g13208.t1.exon3;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . CDS 44025 44128 . + 2 ID=cds.g13208.t1;Parent=g13208.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 44129 44857 . + . ID=g13208.t1.utr3p1;Parent=g13208.t1 #PROT g13208.t1 g13208 MMSLRFATRLQPTRLAMAALAQPVEQQRGMATLKEIRARLKSVKNMEKITKSMKMVSAAKFARAERNLRFGRVLGVGATALSDKTHLKPDADKPNRLLVVVSSDRGLCGAIHSSVCKHVRAELAARKEGDNIKLAIVGDKARTIIQRTLPKEILMHFTEVGKKPATFTEASAIAQEIINSGYEFETAKIIFNRFKTAISYETTNIPVVSLNTLQTAEELTSYEIDDDILESYQEFTFANALYYAFLESNASELSARMTAMDGASKNAGEMIQRLTLTFNRTRQAVITSELIEIISGAAALD* # PASA_UPDATE: g13202.t1, single gene model update, valid-1, status:[pasa:asmbl_3196,status:12],[pasa:asmbl_3197,status:12],[pasa:asmbl_3206,status:12],[pasa:asmbl_3207,status:12],[pasa:asmbl_3208,status:12], valid-1 NODE_19_length_65195_cov_41.1962 . gene 16665 22964 . - . ID=g13202;Name=g13202.t1 NODE_19_length_65195_cov_41.1962 . mRNA 16665 22964 . - . ID=g13202.t1;Parent=g13202;Name=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 22478 22964 . - . ID=g13202.t1.exon1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 22478 22964 . - 0 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 22254 22363 . - . ID=g13202.t1.exon2;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 22254 22363 . - 2 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 21635 22088 . - . ID=g13202.t1.exon3;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 21635 22088 . - 0 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 20265 21353 . - . ID=g13202.t1.exon4;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 20265 21353 . - 2 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 19623 20114 . - . ID=g13202.t1.exon5;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 19623 20114 . - 2 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 17464 19491 . - . ID=g13202.t1.exon6;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 17464 19491 . - 2 ID=cds.g13202.t1;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . exon 16665 17329 . - . ID=g13202.t1.exon7;Parent=g13202.t1 NODE_19_length_65195_cov_41.1962 . CDS 16665 17329 . - 2 ID=cds.g13202.t1;Parent=g13202.t1 #PROT g13202.t1 g13202 MARSFARQSFDFDRKFDDDDDDDFNIDSDPSEYGGYSSYGEDSPTPQPLSAAVDNNGLSFPSFTARIRQNGTAVEAQHDSAEGKEVDAFLETYGDSDSEAEDEAGDGKGAGFTIPNGWQLRETFSRQGRSSDIIDAIYNATKNVFAIVDKKGVSLWDPTANAVVARHDFPAYQHQMYSHIVAVESYNVYIVYSKDLTLRVLNKDLVELSCTRCENRSVLSLLFNEERSELVTGSVGGFTIWSYAKNHKSNLPDSIGVLKARHNYVLTAMRHIELTPDSWVTGLRLEDPKGTPITGGGPRLVVMVGGDALFYDAKTYTQVFVMRALHEFPITACLFFPAESCYLTTSRDSKVRVWNERGVKVKTFHSHTRDVTSALAHPTSPSLAITSSLDGSIRMWHVGTLTEMYAVQLPGSPLLKLGHKDAGNFFCAGKRELHIWGLNHVMELWALARAPARVLRRERCEGKSTRLLVACDDGSARLLSKTGRPVTTLLPPPTASPNGQVEGIAYSRQARVMFVLIDNGATSGNGGEVRGVEGGEGVGNNGSGKGAASSQEIWVYTARTDPCCRVDVWAGEALRGVNPVCLASYTGPLVLTGRPGGDVCPDAYDYLLVGTRRGHVLFYDTGAKAVRHHELKADKDPIVSIEYHVQSNTLVTCALGLDAVIALWALPTLTPCGMVRCALNITCLTRLGSLFMTGHADGTIQILESSQLHKSRVGALTSQRATTRACSDAHGGTNRSATPTAGDRTNERSKSSLMSFVGTTARDNVQGAGIPSAAGQAVSVRQASTGGGSSFGAQAVADPGAAATDHAGPVFSVDCVESMRLFCSAGGDGLVRIWDEWKNLLREIAINPSLRCASFLSYTGDIVLSADDHLYIVHPEIYLPSNFATHSPAPGRDDDVVSNAGSETFEDFEVYDGSLTGAGMTLRDYLVPYSMELQQQWYVEGKAPPAREEVEPEVAETIGEASAAMSTVDEQTELNLSRATSVSSIRSVSTTASSRAPTEIYSSEPPSPGARPDVLDGDFAWDDHLPMLLGTPTEVRSECGSSCASSPHVMSEASSDEEEASRPPPEPAAAASALRKTTSNVPTVSFASMEHATSDHEADEEVRKGSASLTRRLSNARRNSVSGRRKSVSLKSSSRQSMTPSPAENGGLADSPGKRHSAKGAKNVPLASASSNALRRTTSGTKASTGAVTSSRTSLGPSPGSESLVGGHNKGASPQPHDAPISPLFAGDRQPLATAPPAVPPPADAARASSPGMLSAGSSMSSLGDLSASQLSSSVKARRASSVGGSPSRSSLSTAALSGAGRLSIVPVDDAALSGHADAIARSRASSVSALAASAPPRQSESAVPSGNSPDARRTSLVRVDTSKRSSREGEQRKHSEAKEAKEEKKRKKKKKKRAHDEDDATLSKAISALGIFAIPTDDRAQSAPASRQRTTRDPPRPHSSYYRPAPATTHNPQIIVPNEYLRADWDDCVLQRDAEKREKQRERIIAAAERRMASSRGSPMGCESMLGAPRTSQATPLPPPSPLPPNGRASALHTPLRPATVLGTYGDDRADTGRGGELQPLRASTPTSNSPALDDGLDSPPAHFKMGLIFSVVLPYRHRISDFPSFPPEVEGLREGVAKSLFRGAASSSSSVSSLANGRPASARNSTASLAVVSSAAVAAASHLGRTQPPSRARGSPIVRGHASPPSPTQAQSPQPHGRGSAPAVPNGGELVLLIDRLGEQHVKTIARQLVRDVRPTTALRHGHLLPLMGARGAVDTAEHVASTGPRGALAPN* # ORIGINAL: g13210.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 47935 48441 . - . ID=g13210;Name=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 47935 48441 . - . ID=g13210.t1;Parent=g13210;Name=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 48415 48441 . - . ID=g13210.t1.exon1;Parent=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 48415 48441 . - 0 ID=cds.g13210.t1;Parent=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 48279 48312 . - . ID=g13210.t1.exon2;Parent=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 48279 48312 . - 0 ID=cds.g13210.t1;Parent=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 47935 48176 . - . ID=g13210.t1.exon3;Parent=g13210.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 47935 48176 . - 2 ID=cds.g13210.t1;Parent=g13210.t1 #PROT g13210.t1 g13210 MGCCYSEPTYVINDTPAVVYAPPMVYAQAPMMVGGPAYIGGPMYQPYGGGAVIMDGYGDRVIMGGGFGTTTTVMTDGYGDELIIQRDAFGNQRVTEAIMW* # ORIGINAL: g13197.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 345 746 . - . ID=g13197;Name=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 345 746 . - . ID=g13197.t1;Parent=g13197;Name=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 733 746 . - . ID=g13197.t1.exon1;Parent=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 733 746 . - 0 ID=cds.g13197.t1;Parent=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 553 599 . - . ID=g13197.t1.exon2;Parent=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 553 599 . - 1 ID=cds.g13197.t1;Parent=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 345 445 . - . ID=g13197.t1.exon3;Parent=g13197.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 345 445 . - 2 ID=cds.g13197.t1;Parent=g13197.t1 #PROT g13197.t1 g13197 MPIETPKTNWADDVDEEFAKAEDKLPPPQVIGPDKNGIKKVIEYKLNDAGKRIK # ORIGINAL: g13206.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 31823 35886 . + . ID=g13206;Name=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 31823 35886 . + . ID=g13206.t1;Parent=g13206;Name=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 31823 32062 . + . ID=g13206.t1.exon1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 31823 32062 . + 0 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 32218 33027 . + . ID=g13206.t1.exon2;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 32218 33027 . + 0 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 33339 33546 . + . ID=g13206.t1.exon3;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 33339 33546 . + 0 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 33818 33941 . + . ID=g13206.t1.exon4;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 33818 33941 . + 2 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 34856 34958 . + . ID=g13206.t1.exon5;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 34856 34958 . + 1 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 35323 35391 . + . ID=g13206.t1.exon6;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 35323 35391 . + 0 ID=cds.g13206.t1;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 35722 35886 . + . ID=g13206.t1.exon7;Parent=g13206.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 35722 35886 . + 0 ID=cds.g13206.t1;Parent=g13206.t1 #PROT g13206.t1 g13206 MLRARRAREAADATATATHGNNGASSGGKRSADADPAAQQRAVKRKKTLGSTVPVEGEEELAARLFGRVDDVVHSLTDAARGETDNDDETTRESTELHFVLDKEGTAASEGAATAEVAEAEQRRAPAWVDDDDGALNVDIAGERRLRKLRKTEDEEEIDGADYEARLRSQFERIHGRPQWAAHADEQRDKKKKKQKKAKDSGSRAGGEGEGADGEGEDGDADADADAIEEEAGAILRRAGPLLSRHPTRLPSGRLRVTRVQDLNAGAPSDAAVQAVRFHPTAPVAFTAGLDKTLRLFALDGKNNPKIQSVFIPDLPIHEARFTPDGRHIVCSGRRPFFYLYDIEGAAIRKIPNIRGRTERSLERFVVAPDGRHLCFTGEDGALLLVSMHTKQWVATLKMNGTARGVTFSADGKQLMSTGGDGQVYLWDVETRRCVHRFTDDGSTGSISIAASHGGKLFATGSSAGVVNLYDAAALIVPTPRPIKAFMNLTTTIDQVEFNWDDQILGFSSQYKKDAFRVAHVPSLSVFANWPTASTPIHYANSFAFSPHGGFASIGNDRGKALLYRVNHYDSY* # ORIGINAL: g13211.t1 original gene structure, not modified by PASA NODE_19_length_65195_cov_41.1962 AUGUSTUS gene 48913 53419 . + . ID=g13211;Name=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS mRNA 48913 53419 . + . ID=g13211.t1;Parent=g13211;Name=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 48913 49036 . + . ID=g13211.t1.exon1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 48913 49036 . + 0 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 49183 49311 . + . ID=g13211.t1.exon2;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 49183 49311 . + 2 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 49425 49516 . + . ID=g13211.t1.exon3;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 49425 49516 . + 2 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 49832 50031 . + . ID=g13211.t1.exon4;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 49832 50031 . + 0 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 50201 50291 . + . ID=g13211.t1.exon5;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 50201 50291 . + 1 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 50544 50855 . + . ID=g13211.t1.exon6;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 50544 50855 . + 0 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 51159 51247 . + . ID=g13211.t1.exon7;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 51159 51247 . + 0 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 51532 51851 . + . ID=g13211.t1.exon8;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 51532 51851 . + 1 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 52264 52368 . + . ID=g13211.t1.exon9;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 52264 52368 . + 2 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 52655 52729 . + . ID=g13211.t1.exon10;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 52655 52729 . + 2 ID=cds.g13211.t1;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS exon 53058 53419 . + . ID=g13211.t1.exon11;Parent=g13211.t1 NODE_19_length_65195_cov_41.1962 AUGUSTUS CDS 53058 53419 . + 2 ID=cds.g13211.t1;Parent=g13211.t1 #PROT g13211.t1 g13211 MDVSVADVRESAHAAGSHSVTLLFTVDASAIKLTFDITRKDDPTDVANRLISNHNVPCYLEDAIASTLKRLLSELALRKMDDLIFAAADRNCVAEWAEAFYREHAKYLPTSTPSEADFPEAYHVLIHSTASETLVQLEQTYAMAVGELVSGRNMAVANLHARCIRGVMHHLLGVQCRITVVKQEQQMDRLLKGIGATTTERDVNALSAKHLEDMQMLQATWASELTSLRDTQRRDYREFVLALAHEEKERHRKSAAVAASGGAESRPSPRPSVSHGREPLSPQTTRSGTGRDGDAPTPQKKGEMSTPPTMQKSNSQTSLGIGGAIGRLSWFRRSSSSEVRTTSPSSRHSDEGGRSSPALSAQANAAGNVAHPLSIREESMPMQEESFTVHLGTQLKTMHNLRLLCAQSIASLCAVTDPVQRVQTSLSLYSKALSGAVMLEDPPMDYGTGNLLEFARCCESSTDFHFPEFDVQLQQVQVALGNKPLVPGDFYVTRHSNIASFQVVFHLVVDKEVNSALLSTRSPLMLGLRGVLALASKYDVCHVTLPLLLTSLPSDATNDQWKLRRAELVLKCVKGFMMESSAFAAVDLRTITFLLPSDTSEGLFATFSAMVTNIFRMSTPLNLSASASTAAR* # PASA_UPDATE: g13213.t1, single gene model update, valid-1, status:[pasa:asmbl_3202,status:3], valid-1 NODE_19_length_65195_cov_41.1962 . gene 55609 57418 . - . ID=g13213;Name=g13213.t1 NODE_19_length_65195_cov_41.1962 . mRNA 55609 57418 . - . ID=g13213.t1;Parent=g13213;Name=g13213.t1 NODE_19_length_65195_cov_41.1962 . five_prime_UTR 57355 57418 . - . ID=g13213.t1.utr5p1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 57275 57418 . - . ID=g13213.t1.exon1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 57275 57354 . - 0 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 57071 57138 . - . ID=g13213.t1.exon2;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 57071 57138 . - 1 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 56795 56910 . - . ID=g13213.t1.exon3;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 56795 56910 . - 2 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 56448 56514 . - . ID=g13213.t1.exon4;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 56448 56514 . - 0 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 56099 56199 . - . ID=g13213.t1.exon5;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 56099 56199 . - 2 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . exon 55609 55764 . - . ID=g13213.t1.exon6;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . CDS 55657 55764 . - 0 ID=cds.g13213.t1;Parent=g13213.t1 NODE_19_length_65195_cov_41.1962 . three_prime_UTR 55609 55656 . - . ID=g13213.t1.utr3p1;Parent=g13213.t1 #PROT g13213.t1 g13213 MASIMMRRLSAGARVNLGGPLHTVGRRCTASLTGKQNPKTMESNILGSSSIKEGATIVEGFNHQGFTVGGIKHIGSVALFPRFSLLWKVSKVADISEDTLSLFTKFDPPIEILVIGTGSTIAPIDPKIRAFLTSKRIAVEVLDTGNACATFNFLSQEGRVAGAALIPPGSPRPDDSAST* # PASA_UPDATE: g2871.t1, single gene model update, valid-1, status:[pasa:asmbl_7721,status:12], valid-1 NODE_4927_length_1137_cov_99.0989_potentialcontaminant . gene 486 1052 . - . ID=g2871;Name=g2871.t1 NODE_4927_length_1137_cov_99.0989_potentialcontaminant . mRNA 486 1052 . - . ID=g2871.t1;Parent=g2871;Name=g2871.t1 NODE_4927_length_1137_cov_99.0989_potentialcontaminant . exon 486 1052 . - . ID=g2871.t1.exon1;Parent=g2871.t1 NODE_4927_length_1137_cov_99.0989_potentialcontaminant . CDS 486 1052 . - 0 ID=cds.g2871.t1;Parent=g2871.t1;3_prime_partial=true #PROT g2871.t1 g2871 MQEALIYYVSKNALSTSECKEIRIWGCLVHESKFKLMCLRPEIVVRKDDIVITGLLYENIDEIADIATVKGIATLAKWLAVVRETGTLLKRLSGSGKVVPPPEGFVLPDSKMSSQSNFKNVNDIKSLENIFRTKLDVKDKKGGGAADGPVEGDGEPESVPERIGVVDARLLAEAACETMGATIQELCFD # ORIGINAL: g819.t1 original gene structure, not modified by PASA NODE_3315_length_3754_cov_40.8709 AUGUSTUS gene 2351 2839 . + . ID=g819;Name=g819.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS mRNA 2351 2839 . + . ID=g819.t1;Parent=g819;Name=g819.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS exon 2351 2839 . + . ID=g819.t1.exon1;Parent=g819.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS CDS 2351 2839 . + 0 ID=cds.g819.t1;Parent=g819.t1 #PROT g819.t1 g819 MVSQRRCRFLSVDRERDCRRPDALSRDLSRERDLDLPRASFRLRSDGECARDGGDLDVLDRECDLDRERRLSRSLSLPLSLSLSLSLLTLRERPRVDLPPPSPRPARSRPRSPRLTEFASSAVRWRFAGGREGSEWSVDAPPGDAWYSAAWRFFKGCGIALL* # ORIGINAL: g818.t1 original gene structure, not modified by PASA NODE_3315_length_3754_cov_40.8709 AUGUSTUS gene 246 354 . - . ID=g818;Name=g818.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS mRNA 246 354 . - . ID=g818.t1;Parent=g818;Name=g818.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS exon 246 354 . - . ID=g818.t1.exon1;Parent=g818.t1 NODE_3315_length_3754_cov_40.8709 AUGUSTUS CDS 246 354 . - 0 ID=cds.g818.t1;Parent=g818.t1 #PROT g818.t1 g818 MARVFFVGGNWKMNGDNKSNHDLVAVLNSATIPADT # PASA_UPDATE: g2618.t1, single gene model update, valid-1, status:[pasa:asmbl_6230,status:12], valid-1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . gene 242 1360 . + . ID=g2618;Name=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . mRNA 242 1360 . + . ID=g2618.t1;Parent=g2618;Name=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . exon 242 376 . + . ID=g2618.t1.exon1;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . CDS 242 376 . + 0 ID=cds.g2618.t1;Parent=g2618.t1;5_prime_partial=true NODE_3570_length_3188_cov_59.7325_potentialcontaminant . exon 526 600 . + . ID=g2618.t1.exon2;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . CDS 526 600 . + 0 ID=cds.g2618.t1;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . exon 715 843 . + . ID=g2618.t1.exon3;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . CDS 715 843 . + 0 ID=cds.g2618.t1;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . exon 986 1360 . + . ID=g2618.t1.exon4;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . CDS 986 1090 . + 0 ID=cds.g2618.t1;Parent=g2618.t1 NODE_3570_length_3188_cov_59.7325_potentialcontaminant . three_prime_UTR 1091 1360 . + . ID=g2618.t1.utr3p1;Parent=g2618.t1 #PROT g2618.t1 g2618 ETVFGRQPYHGDDEVLESDHKDTIHVSSVNSRCFVRTLAEYTAEQDNQSTLEFPMYFSRSKYLYKKKKIEPKTLPLICVCRQPENPDIPMICCDECDRWYHTNCIGMTKEKLKKLEKYVCAKCEQVSPTETDAPAATAEKPSRKRKR* # PASA_UPDATE: g14382.t1, single gene model update, valid-1, status:[pasa:asmbl_5223,status:3], valid-1 NODE_290_length_27901_cov_40.4096 . gene 2580 4478 . - . ID=g14382;Name=g14382.t1 NODE_290_length_27901_cov_40.4096 . mRNA 2580 4478 . - . ID=g14382.t1;Parent=g14382;Name=g14382.t1 NODE_290_length_27901_cov_40.4096 . five_prime_UTR 4435 4478 . - . ID=g14382.t1.utr5p1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . exon 4417 4478 . - . ID=g14382.t1.exon1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . CDS 4417 4434 . - 0 ID=cds.g14382.t1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . exon 3801 3980 . - . ID=g14382.t1.exon2;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . CDS 3801 3980 . - 0 ID=cds.g14382.t1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . exon 3314 3443 . - . ID=g14382.t1.exon3;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . CDS 3314 3443 . - 0 ID=cds.g14382.t1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . exon 2980 3089 . - . ID=g14382.t1.exon4;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . CDS 2980 3089 . - 2 ID=cds.g14382.t1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . exon 2580 2812 . - . ID=g14382.t1.exon5;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . CDS 2726 2812 . - 0 ID=cds.g14382.t1;Parent=g14382.t1 NODE_290_length_27901_cov_40.4096 . three_prime_UTR 2580 2725 . - . ID=g14382.t1.utr3p1;Parent=g14382.t1 #PROT g14382.t1 g14382 MKVSGDLHQYQVVGRRLPSDKEPTPQLYRMKIFASNPIIARSRFWYFLTKLRKLRKTQGEIVACQEVFEKRPEKVKNFGVWLRYDSRTGTHNMYKEYRDLSIANAVTACYRDLAARHRVRGRSIQIIKTAEITAEQSRRVSTKQFHDSHIKFPLPHRVLKAKSRFIAKRPNTFF* # PASA_UPDATE: g14384.t1, single gene model update, valid-1, status:[pasa:asmbl_5224,status:12], valid-1 NODE_290_length_27901_cov_40.4096 . gene 6382 14301 . - . ID=g14384;Name=g14384.t1 NODE_290_length_27901_cov_40.4096 . mRNA 6382 14301 . - . ID=g14384.t1;Parent=g14384;Name=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 13756 14301 . - . ID=g14384.t1.exon1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 13756 14301 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 13463 13597 . - . ID=g14384.t1.exon2;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 13463 13597 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 13146 13229 . - . ID=g14384.t1.exon3;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 13146 13229 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 12479 12691 . - . ID=g14384.t1.exon4;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 12479 12691 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 12013 12130 . - . ID=g14384.t1.exon5;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 12013 12130 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 11695 11828 . - . ID=g14384.t1.exon6;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 11695 11828 . - 2 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 11220 11405 . - . ID=g14384.t1.exon7;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 11220 11405 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 10694 10984 . - . ID=g14384.t1.exon8;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 10694 10984 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 10151 10549 . - . ID=g14384.t1.exon9;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 10151 10549 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 9952 9999 . - . ID=g14384.t1.exon10;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 9952 9999 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 9666 9728 . - . ID=g14384.t1.exon11;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 9666 9728 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 9170 9464 . - . ID=g14384.t1.exon12;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 9170 9464 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 8833 9042 . - . ID=g14384.t1.exon13;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 8833 9042 . - 2 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 8600 8705 . - . ID=g14384.t1.exon14;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 8600 8705 . - 2 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 8050 8455 . - . ID=g14384.t1.exon15;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 8050 8455 . - 1 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 7729 7912 . - . ID=g14384.t1.exon16;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 7729 7912 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 7496 7611 . - . ID=g14384.t1.exon17;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 7496 7611 . - 2 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 7199 7348 . - . ID=g14384.t1.exon18;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 7199 7348 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 6841 7035 . - . ID=g14384.t1.exon19;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 6841 7035 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . exon 6382 6692 . - . ID=g14384.t1.exon20;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . CDS 6600 6692 . - 0 ID=cds.g14384.t1;Parent=g14384.t1 NODE_290_length_27901_cov_40.4096 . three_prime_UTR 6382 6599 . - . ID=g14384.t1.utr3p1;Parent=g14384.t1 #PROT g14384.t1 g14384 MAAPTVRDWLASLKLETYLDAFINNGYDDLAICAEISEDDLDSMGITLPGHRRRLLAGAKRITDPSAPLDISAAHRESAVVEPVDVVDAPASTSPLSLPPSPLAQSALDADAAPKPPPRKPPKITAPAVPGSTARDDASKRASVFVDLSQVGAAQAAAGPSSPVTARHSRPPLASLPVSLSDSLKAVDMRRHTGFLSKQGGANNNKGWQKRYVVWNGSQLEYYKSEVRTYLFCADGSGELDEWTTILRAAITAEEEFERRIPISTINTLTISVKIDDAQKFRFQIVTLNRVYFFQAENGEDMQGWISAIQNSILFSLNSNTSDKAKSSQGGSAKTARSMFMTGLAALESVREQPENLKCADCNADNPDWASINLGILVCIECSGIHRSMGVHISKVRSVTLDEWSPHLVAMMKAISNARSNEFWEANVTEGFAKPVPDQDRTTRENYVRAKYEHKQFCRQDRAGLPKDALGKALVANAGTDDLVATIECLALGASVDYASPDADNKTALHMAASTGRLLQAILLLQNGAASTVTDCLGYPPLHYAEMGGHEDMARVIGESVAKALNEDRAMQESASSQNQTHPKKRGYLQKQGGSNKGWRKRYIVMEGGAVRYFKNEGDASVPGREAGAIHSWDMTGVVPTGEDRDNPKSFRYCFTVQTGRGRDYAFCAETAAEMGEWLDALRAMVPANATPSRPRKDQIMEGATKGGFLFKRGGTNTSWKRRYFILKGKELFYFKSEEDGLPIDSIDMRRVTNMGEGEGASRAAVAEQEKDTNAFHLASAMRTFYLRAETREDMVAWLQALKNTQVFGVLLQELLKTSPRRVPKIVEFSLGYVEKHGLDAEGIYRLSGQSTAIQQLRILVNQDEDQLTEAACADVHDVSGLLKLYFREMPEPLLTFKGYADFITSSRIQDHDNRLYELQRCAYDLPIENFYTLKMLMSHLAKVAERQSVNKMGTSNLAIVFGPTLMTVSSQDQGCLSEMSEQYRVVQDMITYNEWIFGRPEDEDPRVAERARRIPVGGSGASGAGLTPGGSLNASSSAAGMGGEHAGNSNVDMEAKMEEFKRKLEAAQAQTKSTTSQAAADTIAFNLEVYVEPLGTNATLAVTGAMTARDTLNLAIQKCNLQAATDWAVYEVLRAGYLERELADDEKVLKATSQWEINTQNHLMIRRSTLKPMLAELIKTNQRATPTSTYSIKGFLHKEGGSHKSWKKRYFVTMPDGLYYYKDASPKNAPLGSFPFKGLLAYYVRDHKKAPTRHCFGLRIPGAIGEEDSVRFLCADEKDELDRWIASLAYFKYLLDPPKLSSRAPPPKPTPIKKSPSQEVFQ* # ORIGINAL: g14383.t1 original gene structure, not modified by PASA NODE_290_length_27901_cov_40.4096 AUGUSTUS gene 4821 6337 . + . ID=g14383;Name=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS mRNA 4821 6337 . + . ID=g14383.t1;Parent=g14383;Name=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 4821 4898 . + . ID=g14383.t1.exon1;Parent=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 4821 4898 . + 0 ID=cds.g14383.t1;Parent=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 5039 5113 . + . ID=g14383.t1.exon2;Parent=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 5039 5113 . + 0 ID=cds.g14383.t1;Parent=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 5225 6337 . + . ID=g14383.t1.exon3;Parent=g14383.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 5225 6337 . + 0 ID=cds.g14383.t1;Parent=g14383.t1 #PROT g14383.t1 g14383 MAVHMSCAVDDALVAASNPVRATDELLLPCSSPDKGVIHAACRTLSLRLSAGSAEVVAVCDIVTTWCASLPADISAIEWTLWTVSRVLCTAARVSVDHSWEAVCRAVDALASAVLRNRAASPAVVCCPSTAVAGAFSLARRVCAMAGGRRLPASAVDMCLRALADEPHNSFVCGRTWRKVLALARTLAENRPIEWMNVAPAVLQSGSRRPPFDACAAVGLENGVVLRGTLCRAWLVLALRAASALAAGESTSTLHPAVKAALATAASAGGRAGLIGLLVEDDADFIATMRASLAFTATPFSRTAPEVPPVRWAAHPLPPALWPSSLLEGLCTFAGEQAATTLMIDWLLDAQGPAFLEVLLAHLRTVSGDPSPSCYWAKYTGTCHTLSAVRASVEKCAKLGLLPYDAQPLLRRLRCVPDDPT* # PASA_UPDATE: g14381.t1, single gene model update, valid-1, status:[pasa:asmbl_5225,status:12], valid-1 NODE_290_length_27901_cov_40.4096 . gene 1675 2458 . + . ID=g14381;Name=g14381.t1 NODE_290_length_27901_cov_40.4096 . mRNA 1675 2458 . + . ID=g14381.t1;Parent=g14381;Name=g14381.t1 NODE_290_length_27901_cov_40.4096 . five_prime_UTR 1675 1675 . + . ID=g14381.t1.utr5p1;Parent=g14381.t1 NODE_290_length_27901_cov_40.4096 . exon 1675 2458 . + . ID=g14381.t1.exon1;Parent=g14381.t1 NODE_290_length_27901_cov_40.4096 . CDS 1676 2326 . + 0 ID=cds.g14381.t1;Parent=g14381.t1 NODE_290_length_27901_cov_40.4096 . three_prime_UTR 2327 2458 . + . ID=g14381.t1.utr3p1;Parent=g14381.t1 #PROT g14381.t1 g14381 MRMSKMAFLIRSARRMLFGVTHPSTEWYAATVMPLSIIPTHTRKLSSIGGSDEPTRTSPPSLLRPPSKESADTPPSKKIPTVSVRPLSAPATGAQGGENRRERPPRAAGAVEDASSSESQEKKTTAGAQKEKELRVTSNIGENDLNMRLKRSGEFLDKGYRVKATVIARQGFPVVHAELDKMRANICAHLADKGAVHGTPRVSGRLLSFFLVPKRK* # PASA_UPDATE: g14385.t1, single gene model update, valid-1, status:[pasa:asmbl_5221,status:12], valid-1 NODE_290_length_27901_cov_40.4096 . gene 14919 16088 . + . ID=g14385;Name=g14385.t1 NODE_290_length_27901_cov_40.4096 . mRNA 14919 16088 . + . ID=g14385.t1;Parent=g14385;Name=g14385.t1 NODE_290_length_27901_cov_40.4096 . five_prime_UTR 14919 14975 . + . ID=g14385.t1.utr5p1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . exon 14919 15155 . + . ID=g14385.t1.exon1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . CDS 14976 15155 . + 0 ID=cds.g14385.t1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . exon 15260 15427 . + . ID=g14385.t1.exon2;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . CDS 15260 15427 . + 0 ID=cds.g14385.t1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . exon 15581 15693 . + . ID=g14385.t1.exon3;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . CDS 15581 15693 . + 0 ID=cds.g14385.t1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . exon 15938 16088 . + . ID=g14385.t1.exon4;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . CDS 15938 16055 . + 1 ID=cds.g14385.t1;Parent=g14385.t1 NODE_290_length_27901_cov_40.4096 . three_prime_UTR 16056 16088 . + . ID=g14385.t1.utr3p1;Parent=g14385.t1 #PROT g14385.t1 g14385 MLHAAQLVASFQKASVSDQTAKPAPTPVATQAPKAPTQQPNMASERTYIMVKPDGVQRGLVGEIIKRFETRGFRLVALKFVQPTEDHLRQHYADLAGRPFFAGLVKYMSSGPVVCTVWEGKDAVKTGRKMLGETNPLQSAPGTIRGDYAIDVGRNIIHGSDTVENAEKEIALWFRPEELVAWTPAIRGQIYE* # ORIGINAL: g14386.t1 original gene structure, not modified by PASA NODE_290_length_27901_cov_40.4096 AUGUSTUS gene 16170 23521 . - . ID=g14386;Name=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS mRNA 16170 23521 . - . ID=g14386.t1;Parent=g14386;Name=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 21184 23521 . - . ID=g14386.t1.exon1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 21184 23521 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 20821 20972 . - . ID=g14386.t1.exon2;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 20821 20972 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 20509 20648 . - . ID=g14386.t1.exon3;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 20509 20648 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 20265 20338 . - . ID=g14386.t1.exon4;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 20265 20338 . - 1 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 19946 20081 . - . ID=g14386.t1.exon5;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 19946 20081 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 19699 19777 . - . ID=g14386.t1.exon6;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 19699 19777 . - 1 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 19346 19469 . - . ID=g14386.t1.exon7;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 19346 19469 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 18868 19091 . - . ID=g14386.t1.exon8;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 18868 19091 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 18668 18762 . - . ID=g14386.t1.exon9;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 18668 18762 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 18233 18438 . - . ID=g14386.t1.exon10;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 18233 18438 . - 1 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 17927 18108 . - . ID=g14386.t1.exon11;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 17927 18108 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 17751 17784 . - . ID=g14386.t1.exon12;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 17751 17784 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 17486 17596 . - . ID=g14386.t1.exon13;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 17486 17596 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 17204 17357 . - . ID=g14386.t1.exon14;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 17204 17357 . - 2 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 16925 17090 . - . ID=g14386.t1.exon15;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 16925 17090 . - 1 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 16532 16660 . - . ID=g14386.t1.exon16;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 16532 16660 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 16170 16367 . - . ID=g14386.t1.exon17;Parent=g14386.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 16170 16367 . - 0 ID=cds.g14386.t1;Parent=g14386.t1 #PROT g14386.t1 g14386 MASAAEAVSLPSLASGGSTVFDVEGVRWRDVAVSVHGASNAHSAHVAQTRPFGGGVFLRTAGGDQAADAAAHGRFLVFRCVGEVLELTEHSLECTLADNAVRYRFPFRILPSVSFVEERSGGPSSSPTAIHVLLATERSVHRLSFAHPASSSGVKRAQGRVLSVLSPALGAPHTDAHVALSMRLGGGAGPGEASPYVIATAASPSSVVIGCANGALVHVAFAAGHAPEETELAQSSLVRRLWSGMLPSFIAGGVGASARSRVTGLAVVSIPGADILIAAASADSHLRVWSLGRRECVQDIDLGALWMRGGLGDVAEDAEGPCSHLLRYVSMGSSQRVLAALRFGGRTAIASLDVDVHGLQPLAEPSGLLTVPTEAVLDYCVAEGVEGLRMVVITCAFDAGSDGGYRDGDGGEATWVVALSSQTWLADGDWAQVAADDGLRAPSVPTLGGGEDDASLLHHQPDDAAEEGDAHGGQRRVDAQEYYLGLLFAPGRFGRRALARGIHAFGGRVGAQVLHGLHATHVQLRDEAVAAVYADVRVDIHVAARSFFGSVVLCIRACATCDTAVLYTHMHITPDLQVALRASSGEITAEQYRRLVRLSWESLFRGCDTFARLDLALLGCFADAGGAGVFAVRRAALTALRPADPTESVACAAAGAPVSPTGPLAAPSIDGGVVDFVRAASLLASALGDNALEAFEEDVWRGISAVESATRALWPLCMHGRIPAGNDSPHSASELPMRLWDALSRLRSFAASVDGVLRLVEGATASNGGPEGDASAMLIDDAQQRWSSPNSARLATQFASATVNGILGLRYRIARNSLLLLCMVLNGIQEPFKHPFDRQAIVSSYLPRMSRTLRHYATLHWLSRQHPVPIAPATGAVTTGLAAMTLGEGKEAVLDGHVDILGESALSLYVAHAYADTRHGLEHTRGLDSVGFGEEVLASSLSILRKLEWSCTRDGPTPFVEFLLSKQQTLIAEDLIRMVDTATPSLVYYLGHCLAASGEFHKASDCLVRAAAGFDSANVDAALWRVAGVDGSQLRHGGSDVDRSMRAEGAVRLLLRGMRLFEERRLPGIAMGFASAALGKAGALVDDSAPILWSNVFKYGLDLGDYDKAYTAMISNPDLNRRRDCLRRFVAVLSERRELAVMCRMPYAGLEGDVESALLFTARNSDVTSIPNPYEFLFAFHVHRGNYRQAGSVMYECAQRLGVEAHPQSVDSLQQQAKAFLASRNALRLSDPSNAWIVVPREYRAGQWNKRKRDGSVSAADELAADDDEAVTIVEAPDVDRMYAAVLARLTLAQSGDGVPPASITPAEALTLLLRAGQIDTAVSHARLYGLDLAPVFDALAARCVGVDGSVVSDGSDDAWSLLRNLLERYDGREGNYGHHQRAADRILAADGRVALPAWLVASFKRKNAPALLSLYVKHDRLIDAAHLAIDYMVALTAGVGTDTFGAKNALHGTEASVWLPHALIERLFAALGDAGAYSQDHLDARDQLRHGVAGYLKCVRDASGGVRMPLAR* # ORIGINAL: g14388.t1 original gene structure, not modified by PASA NODE_290_length_27901_cov_40.4096 AUGUSTUS gene 26101 27743 . - . ID=g14388;Name=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS mRNA 26101 27743 . - . ID=g14388.t1;Parent=g14388;Name=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 27660 27743 . - . ID=g14388.t1.exon1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 27660 27743 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 27366 27440 . - . ID=g14388.t1.exon2;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 27366 27440 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 27104 27202 . - . ID=g14388.t1.exon3;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 27104 27202 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 26813 26941 . - . ID=g14388.t1.exon4;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 26813 26941 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 26309 26638 . - . ID=g14388.t1.exon5;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 26309 26638 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS exon 26101 26199 . - . ID=g14388.t1.exon6;Parent=g14388.t1 NODE_290_length_27901_cov_40.4096 AUGUSTUS CDS 26101 26199 . - 0 ID=cds.g14388.t1;Parent=g14388.t1 #PROT g14388.t1 g14388 MPHLQFLAVDPRMGNSVCTERVIQSLTELRNWLGKLCWPEADLALTLSKRVDEIAESVVASLAEELGRVLQQDLAASPRDSPLSTKACILVNNIDAVRIKAPTVVADAVELTNELTQMYAEALNLLSQRVLRELFDAVALTSSLGADEGFSVRNLIALKRGIPEGEVLRRVDAAWAVAECSLEIARATMHKGASVDFAAAIWRASLRALEPILSPKNATMYQETPVNGRQLRVLDAMVKAMHRTISTSGVGKDALNCKEYGMVTAQIAFYR* # PASA_UPDATE: g14387.t1, single gene model update, valid-1, status:[pasa:asmbl_5222,status:12], valid-1 NODE_290_length_27901_cov_40.4096 . gene 24191 25864 . + . ID=g14387;Name=g14387.t1 NODE_290_length_27901_cov_40.4096 . mRNA 24191 25864 . + . ID=g14387.t1;Parent=g14387;Name=g14387.t1 NODE_290_length_27901_cov_40.4096 . exon 24191 24256 . + . ID=g14387.t1.exon1;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . CDS 24191 24256 . + 0 ID=cds.g14387.t1;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . exon 24373 24750 . + . ID=g14387.t1.exon2;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . CDS 24373 24750 . + 0 ID=cds.g14387.t1;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . exon 25031 25198 . + . ID=g14387.t1.exon3;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . CDS 25031 25198 . + 0 ID=cds.g14387.t1;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . exon 25414 25864 . + . ID=g14387.t1.exon4;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . CDS 25414 25764 . + 0 ID=cds.g14387.t1;Parent=g14387.t1 NODE_290_length_27901_cov_40.4096 . three_prime_UTR 25765 25864 . + . ID=g14387.t1.utr3p1;Parent=g14387.t1 #PROT g14387.t1 g14387 MSVSGIDLVALVPVALAALIAAGVAVLWWTAPRPRPRADSEQSYSDPATGRRTLFPSLFEDPTVDLSLVVPAYNEQERLPVMLDETIEYLERRSTRVKNFSWEIIIVNDGSRDGTSAVAGKYVSRLGASKVRLLEAERNRGKGGAVKLGMLSARGRLLLMVDADGATKISDLEKLLAAMAKLDKAKGAVVIGSRAHLQDEAVAQRTVLRNILMYGFHVLVQLCVRGIRDTQCGFKLFDRRAARLLFPAMHVERWCFDIELLFLARLHGMPIGEVSVNWQEIPGSKLSPLSSSVQMAKDLVLIRLYYLFGVWSHRPRAKRD* # PASA_UPDATE: g13366.t1, single gene model update, valid-1, status:[pasa:asmbl_3629,status:3], valid-1 NODE_2150_length_7495_cov_33.626 . gene 1445 6993 . + . ID=g13366;Name=g13366.t1 NODE_2150_length_7495_cov_33.626 . mRNA 1445 6993 . + . ID=g13366.t1;Parent=g13366;Name=g13366.t1 NODE_2150_length_7495_cov_33.626 . five_prime_UTR 1445 1827 . + . ID=g13366.t1.utr5p1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 1445 2058 . + . ID=g13366.t1.exon1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 1828 2058 . + 0 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 2370 2511 . + . ID=g13366.t1.exon2;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 2370 2511 . + 0 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 2773 2916 . + . ID=g13366.t1.exon3;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 2773 2916 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 3315 3377 . + . ID=g13366.t1.exon4;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 3315 3377 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 3588 3694 . + . ID=g13366.t1.exon5;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 3588 3694 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 3964 4183 . + . ID=g13366.t1.exon6;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 3964 4183 . + 0 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 4424 4648 . + . ID=g13366.t1.exon7;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 4424 4648 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 4797 4886 . + . ID=g13366.t1.exon8;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 4797 4886 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 5373 5463 . + . ID=g13366.t1.exon9;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 5373 5463 . + 2 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 5757 5835 . + . ID=g13366.t1.exon10;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 5757 5835 . + 1 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . exon 6252 6993 . + . ID=g13366.t1.exon11;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . CDS 6252 6644 . + 0 ID=cds.g13366.t1;Parent=g13366.t1 NODE_2150_length_7495_cov_33.626 . three_prime_UTR 6645 6993 . + . ID=g13366.t1.utr3p1;Parent=g13366.t1 #PROT g13366.t1 g13366 MAGESTSAAKVRDGTEDDSECSEDENTIRVDDDFFESAVDAETSNGGTAGAADDLNNSVASSADTRPNASSAPPKKKAVLTRKKSSIARVSHIIIRGHAGGAKLSQMDMEKLAGQYGLSTSQIQEFKHVFDMFERDQGASLSVNEMRDLLKVLRLPHSEEEISKMIQDVELNAHIEPELDFDEFLTLMTHEKRRPSNYKPSNGGRRVSLIDEGASPADTPRASSPHGLGDHPIREGEGEGEGDDGDDDEDCDTPEDLEKTAMLMHYAVHRVMDKAGRSFEEVSRYYESKKRRGPHVLSYFTAGIRLLAVSEHKLRKMAQEELRKSHSVRQGKHVSDNLSNTKSPYAADIAYKLLLRDMPVRRSFRCMTRETATEVPSDPKTEYNLGLPKPIECELARPMTSSAVSRHLPHPKSPSSKSQGPSRAGHMAGGGESPTRLRLLPPLPALPLPTPTKRDHISIRELPKVRATIHDITVSRRRHMLERASHQYWSTFPADDELSTEWSRSRLEHTSRIYFNNGTQRGHQHHHHHHHHHQHHTEETHKYPSPSRDGGPVNGSSARDGAAHDQSRSDSDRSIECGIDSAPPMHTEGEMSAA* # ORIGINAL: g13365.t1 original gene structure, not modified by PASA NODE_2150_length_7495_cov_33.626 AUGUSTUS gene 314 562 . + . ID=g13365;Name=g13365.t1 NODE_2150_length_7495_cov_33.626 AUGUSTUS mRNA 314 562 . + . ID=g13365.t1;Parent=g13365;Name=g13365.t1 NODE_2150_length_7495_cov_33.626 AUGUSTUS exon 314 562 . + . ID=g13365.t1.exon1;Parent=g13365.t1 NODE_2150_length_7495_cov_33.626 AUGUSTUS CDS 314 562 . + 0 ID=cds.g13365.t1;Parent=g13365.t1 #PROT g13365.t1 g13365 ERNEKAAASTPAAIRYDYILIGLGIFLLAISAVLILSGDDSESKFATSTGAAARKAVSEQRKEAAKAEKKSEKRSKPESKSD* # PASA_UPDATE: g9878.t1, single gene model update, valid-1, status:[pasa:asmbl_6925,status:12], valid-1 NODE_4072_length_2240_cov_41.2171 . gene 40 863 . + . ID=g9878;Name=g9878.t1 NODE_4072_length_2240_cov_41.2171 . mRNA 40 863 . + . ID=g9878.t1;Parent=g9878;Name=g9878.t1 NODE_4072_length_2240_cov_41.2171 . five_prime_UTR 40 41 . + . ID=g9878.t1.utr5p1;Parent=g9878.t1 NODE_4072_length_2240_cov_41.2171 . exon 40 234 . + . ID=g9878.t1.exon1;Parent=g9878.t1 NODE_4072_length_2240_cov_41.2171 . CDS 42 234 . + 0 ID=cds.g9878.t1;Parent=g9878.t1;5_prime_partial=true NODE_4072_length_2240_cov_41.2171 . exon 374 863 . + . ID=g9878.t1.exon2;Parent=g9878.t1 NODE_4072_length_2240_cov_41.2171 . CDS 374 810 . + 2 ID=cds.g9878.t1;Parent=g9878.t1 NODE_4072_length_2240_cov_41.2171 . three_prime_UTR 811 863 . + . ID=g9878.t1.utr3p1;Parent=g9878.t1 #PROT g9878.t1 g9878 TSLSLSLSLSLSLATQHTPHGFAQAEREPRFLFEPVQQTAYACIYGNFCVSLTHDEPMWPRGWRILRIVGIEGSILSNGSVIGRTPEGRAVLGTDDGHTWAPIDEESVATLLLESKVKRSHAPGMNDGGTPPSGPPSQLPQATLTALASDSGALEASSSPTAAALPLGVDGYFHVNDKGVYYIDDQGGYGSSTSRLLVLWDCSGKCTAK* # ORIGINAL: g9879.t1 original gene structure, not modified by PASA NODE_4072_length_2240_cov_41.2171 AUGUSTUS gene 1158 1823 . - . ID=g9879;Name=g9879.t1 NODE_4072_length_2240_cov_41.2171 AUGUSTUS mRNA 1158 1823 . - . ID=g9879.t1;Parent=g9879;Name=g9879.t1 NODE_4072_length_2240_cov_41.2171 AUGUSTUS exon 1158 1823 . - . ID=g9879.t1.exon1;Parent=g9879.t1 NODE_4072_length_2240_cov_41.2171 AUGUSTUS CDS 1158 1823 . - 0 ID=cds.g9879.t1;Parent=g9879.t1 #PROT g9879.t1 g9879 MIPYAGLSGYDTLMHIINGGRLERPFHCAPDFYASIVEPCWRSEPKDRPTFEHIASVAYAQLAKARHKAERSASPTMGTTAGEDAHTAGGRNGLMSHLLDTSLAHAWTNPYDNSPDVSRTYSLKLSQGWKPESAYDNTPGMSLARQLAKLSAVEKNDAPSADSADVDAVEVQMIDPEIAAAMAKLVAMELATAGSQDELRVRAYANAYEEVTEHRMLESAV* # ORIGINAL: g3913.t1 original gene structure, not modified by PASA NODE_47_length_50826_cov_42.2787 AUGUSTUS gene 14321 17061 . - . ID=g3913;Name=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS mRNA 14321 17061 . - . ID=g3913.t1;Parent=g3913;Name=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 16082 17061 . - . ID=g3913.t1.exon1;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 16082 17061 . - 0 ID=cds.g3913.t1;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 15473 15791 . - . ID=g3913.t1.exon2;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 15473 15791 . - 1 ID=cds.g3913.t1;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 14784 15286 . - . ID=g3913.t1.exon3;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 14784 15286 . - 0 ID=cds.g3913.t1;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 14321 14402 . - . ID=g3913.t1.exon4;Parent=g3913.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 14321 14402 . - 1 ID=cds.g3913.t1;Parent=g3913.t1 #PROT g3913.t1 g3913 MRRTSASTIWNPRRMCMFIFLATVMGHAVLLIALHRGVLLSAHPLTFGPQHQSVAGQSSASVLHFALRRADTAVDGFSGTVSIDTQTQDSPGMDRHVLGAGVHPRAPPVDVSVPSNSIYHAETSPLDDAAGAMPQSARESTGQQQGTMSSEPPQGMCSAGFVPLRTPIRNIGGLSLSASPGARSSAWRSAEGGALELGGEGEQSTNTNTNSNANTDTESDTESIAAVESGGGDVGGNVGGWACVPCPRDHFSLPSLPTCMPLLGCGEITANVRRGNVLNNNGSVKTVFTAYLRDEDGLEHPIALLTSKVHNGAPTAPVMRQSIERLRELCPSVHVTQIVGYCVEYGANGTVSNVSIVTELAARGSALGFLGALLRLAPQSAPDVRVNGLVVARIRRALAVEYVRAIAFLHGVSTGPYIMCDGKDPRRMLKQFLSRCQVLIATDFPIDFTYTRRRRHVHCKVFRVGMQWRIKVCDVDRLVRVSDTAPVKRGMCHLPRVFNETFTSPEERRPRYSPPPEPPADGGPWLHTAFNEKSDVWKIPNVVSLILGSNSALTNGTVSLLSSDQLQKLRALAALCKEINSVRRPKSSDLVVAYSALLRIRSDRRAELLCDEPGPPAAASSAGDVRC* # PASA_UPDATE: g3921.t1, single gene model update, valid-1, status:[pasa:asmbl_7633,status:12], valid-1 NODE_47_length_50826_cov_42.2787 . gene 49255 50590 . + . ID=g3921;Name=g3921.t1 NODE_47_length_50826_cov_42.2787 . mRNA 49255 50590 . + . ID=g3921.t1;Parent=g3921;Name=g3921.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 49255 49462 . + . ID=g3921.t1.utr5p1;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 49721 49820 . + . ID=g3921.t1.utr5p2;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . exon 49255 49462 . + . ID=g3921.t1.exon1;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . exon 49721 49940 . + . ID=g3921.t1.exon2;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . CDS 49821 49940 . + 0 ID=cds.g3921.t1;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . exon 50396 50590 . + . ID=g3921.t1.exon3;Parent=g3921.t1 NODE_47_length_50826_cov_42.2787 . CDS 50396 50590 . + 0 ID=cds.g3921.t1;Parent=g3921.t1;3_prime_partial=true #PROT g3921.t1 g3921 MAKIRKDDRKYDIREVWEYNLEDEMAAIRQVIQNYPYLAMDTEFPGIVARPIGNFRSTAEYHYQSLRCNVDLLKIIQLGITFADDKGNVPRDACTWQFNFKFSLT # PASA_UPDATE: g3914.t1, single gene model update, valid-1, status:[pasa:asmbl_7627,status:3], valid-1 NODE_47_length_50826_cov_42.2787 . gene 19063 21648 . + . ID=g3914;Name=g3914.t1 NODE_47_length_50826_cov_42.2787 . mRNA 19063 21648 . + . ID=g3914.t1;Parent=g3914;Name=g3914.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 19063 19234 . + . ID=g3914.t1.utr5p1;Parent=g3914.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 19529 19637 . + . ID=g3914.t1.utr5p2;Parent=g3914.t1 NODE_47_length_50826_cov_42.2787 . exon 19063 19234 . + . ID=g3914.t1.exon1;Parent=g3914.t1 NODE_47_length_50826_cov_42.2787 . exon 19529 21648 . + . ID=g3914.t1.exon2;Parent=g3914.t1 NODE_47_length_50826_cov_42.2787 . CDS 19638 21575 . + 0 ID=cds.g3914.t1;Parent=g3914.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 21576 21648 . + . ID=g3914.t1.utr3p1;Parent=g3914.t1 #PROT g3914.t1 g3914 MAHGQIPAVLPFGQDFRIPADFPDHTHDWAGMPGLKPAITLVNEHLWQQFNQHTNEMIIAKKGRCLFPVPRLLIANLEPEVLYTVAVDFVPVDSVRWKYVDGRWMEGGKGEKHVLASVHVHPDSPHSGAFWMKKEIAFDAVKVTNKFNNDGHIVLNTFHKYRLRFHIIKINEPLQEPTIIKTESFPATDFIAVTSYVNEQIKFLKINNNPFARAFKMDKEPGALGQHASANDHSDSNEDNDESEGDQTRQPGSGQPTHGAPVPPGAGVQPSANTHAHAHGHPMQGPSAVATVTAGTKRKAAAMASSGSAQEIDEAQAVTAAAAVPDARDQLPSAVIDRPLKVLVVDGDTAVHDLVNSHLQGKGYVITCVTNTTRAWDLLKDSYEGTVGLAASGAAAPGNGRETTTDTQKEGGATESSAVGVPLVSVRGEEGPSGPGEPSTAPALPADGDSVDGMHSAGAISSDVVMAGSNDANVDNTQNTNSNVSTDAADVDALGARKSPEKEGMSGPFDIVLTEIAGDDLDGLALMRRIRTTPQLLCTAVTLMSVEGHPAAADTCVSEGADDYMTKPLCIGLFGRRGKTCVEKRRWKARERWITTALRDETKRFAELERVHEMLGIQKDTKTRKVDELEEEVSRLRGRITAATR* # PASA_UPDATE: g3920.t1, single gene model update, valid-1, status:[pasa:asmbl_7632,status:3], valid-1 NODE_47_length_50826_cov_42.2787 . gene 43712 49131 . + . ID=g3920;Name=g3920.t1 NODE_47_length_50826_cov_42.2787 . mRNA 43712 49131 . + . ID=g3920.t1;Parent=g3920;Name=g3920.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 43712 44239 . + . ID=g3920.t1.utr5p1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 43712 44294 . + . ID=g3920.t1.exon1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 44240 44294 . + 0 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 44561 44648 . + . ID=g3920.t1.exon2;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 44561 44648 . + 2 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 44885 45332 . + . ID=g3920.t1.exon3;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 44885 45332 . + 1 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 45603 46483 . + . ID=g3920.t1.exon4;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 45603 46483 . + 0 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 46742 46922 . + . ID=g3920.t1.exon5;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 46742 46922 . + 1 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 47075 47296 . + . ID=g3920.t1.exon6;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 47075 47296 . + 0 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 47478 47749 . + . ID=g3920.t1.exon7;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 47478 47749 . + 0 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 47924 48019 . + . ID=g3920.t1.exon8;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 47924 48019 . + 1 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . exon 48226 49131 . + . ID=g3920.t1.exon9;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . CDS 48226 48790 . + 1 ID=cds.g3920.t1;Parent=g3920.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 48791 49131 . + . ID=g3920.t1.utr3p1;Parent=g3920.t1 #PROT g3920.t1 g3920 MGQALGKGSAEFNKAVKSFSEAELDWLHKTYKDLARRSGKKTVDKEAFLQYFPLPGMLGERLFAVFDRKKNQSINFEEFVCGLSLCFRGSEDDKCRVIFDMFNLAENGDLTRDEMVTMLNNSFLAAAMQHEQKEHHSSDEGESDSTSVNPDIVPAGIVTPDEVVSTAKIVADDAFKTCDSEHTGKLSYVEFQSWIHQHPDVLNTVFENHYLTEHTHQMMERASPLPWDRSHANENSTKPHVVGDNAIEGYMTSPSHNPLHLKKRRYFILKDDYLYKFSSATDLKPMGAYFLGHAFVDLYTDDKSDRTMKRESSMASSEDMHDISRSNSTTGRPRSASEYGSGSDEDHPPGTVAGPTPPSQGGLSRMQSVQKVQRMSSIIDDEHSAETPTTSSGGVAVNSHGTVNTNYHPSALNPHGRIRGESVSAGNGGLTPSQSLGSIEVYASGTSGANRRSLVGRPPFVGSEEHLEGEKTEKSTGSIRRTSTAKGRKTKYGLKITFSNGYERVLYADTQLDAELWYNSLKRAAKCRAIEDTYVLTEKDIGKGAFATVYEATHRVTGKRFAVKVIDKDDLVPAEREGMLAEVAILKLAHHPNIVALRDVFETPEKLYLVMELCTGGELLDVLQEGPLSEEEARPIVRQLGRGIAYLHDLGIIHRDLKPSNILFQSSGTNDVKICDFGYSKFARPTEGLHDPCGTLKYWAPEIVKKEDHNKAVDMWTLGILTYSILTGVFPFGGNDEEELLESIAKGKFNCLNSNYKALSESAKDLIRNLLKLDPSKRLTATQVLEHPWVREGASQRTSISGRDSPKTLPTILPSISSSLMHSQSERGTASTFGQFAAGLKKDIIETAHPAEKKEHHLHVHGHHYATGGPLGSAVPSPGVSAAASAVGSPDLVESPDLSRKDVPVVLIGGGSPTSTPTSTPAVTTTATEGDVACA* # PASA_UPDATE: g3912.t1, single gene model update, valid-1, status:[pasa:asmbl_7626,status:12], valid-1 NODE_47_length_50826_cov_42.2787 . gene 1733 13619 . + . ID=g3912;Name=g3912.t1 NODE_47_length_50826_cov_42.2787 . mRNA 1733 13619 . + . ID=g3912.t1;Parent=g3912;Name=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 1733 2025 . + . ID=g3912.t1.exon1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 1733 2025 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 2352 2590 . + . ID=g3912.t1.exon2;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 2352 2590 . + 1 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 3086 3223 . + . ID=g3912.t1.exon3;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 3086 3223 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 3702 4456 . + . ID=g3912.t1.exon4;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 3702 4456 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 4810 5448 . + . ID=g3912.t1.exon5;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 4810 5448 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 5843 6023 . + . ID=g3912.t1.exon6;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 5843 6023 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 6221 6324 . + . ID=g3912.t1.exon7;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 6221 6324 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 6630 6714 . + . ID=g3912.t1.exon8;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 6630 6714 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 7119 7267 . + . ID=g3912.t1.exon9;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 7119 7267 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 7798 8471 . + . ID=g3912.t1.exon10;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 7798 8471 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 8715 9420 . + . ID=g3912.t1.exon11;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 8715 9420 . + 1 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 9589 9943 . + . ID=g3912.t1.exon12;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 9589 9943 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 10175 10202 . + . ID=g3912.t1.exon13;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 10175 10202 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 10481 10553 . + . ID=g3912.t1.exon14;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 10481 10553 . + 1 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 10975 11054 . + . ID=g3912.t1.exon15;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 10975 11054 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 11357 11405 . + . ID=g3912.t1.exon16;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 11357 11405 . + 1 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 11547 11579 . + . ID=g3912.t1.exon17;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 11547 11579 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 11905 11994 . + . ID=g3912.t1.exon18;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 11905 11994 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 12245 12314 . + . ID=g3912.t1.exon19;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 12245 12314 . + 0 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 12563 12685 . + . ID=g3912.t1.exon20;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 12563 12685 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . exon 13278 13619 . + . ID=g3912.t1.exon21;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . CDS 13278 13606 . + 2 ID=cds.g3912.t1;Parent=g3912.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 13607 13619 . + . ID=g3912.t1.utr3p1;Parent=g3912.t1 #PROT g3912.t1 g3912 MWRPPSYPQARLGAGMRWSLGFSIAALLQTLVIALSMIPSNVVASGSTPSFLGGPGYALFFNDPKQYGIMADTLTSPDGEYTVTGFPSRALTIEYWIRTVYRADYNDQLFLLFGYGSEDVITPTGDRVYDDNVVQCCAFVEDNRQVLYILPSLSGAKPVSTHADAEYRRDFTQWHHYAITFDAMRNASYPSTVYVYRDGEIIMKESIPEYGNASIPSTGTFVLAQDQDSVGGGFDPAQSFVGMLDELRIWNIARSQSEIRRDMNAELHGDEANLWAYYPFNEGVGGIAYNKVNASRYPIRLGVGADVPSAPNQKPLWAISRAPVAGQLPMRALANRGSLGRVDFSVLPVSVNVTIGSISTSSCAGTVEFFSDDAGSVPLADNAVLPPGTSYAFARIATGAPSPFVTCNVSYTVATATGSGVEMLVIAENRVPIVTNVTVTFDEDSEGVFPLLAVDSEIIAAVVITSIPKHGTLYALTTRQERDFAIIANNTPIFTSGGPVSYFPTANSHGLPFDTFTYHVIDMSGGVSGEATVTINIAPVDDLPVAGNNPYSLDFIRVGQSVVLATLDPTNANATFSVAFYVKMSALPSAAANNYTLVVFPASGLSGARYELSITHDGRIRFVVGSATVDADFTPFVGDKWTHVTVGVAQWHAVIHVNGSVVANGTISSRPVVPPGALIGGFVGALDEFCVYGSLLDARDVNVIRDVKRASLGGKLLGCFCFDEGLGLTAKCTAGEGGSCPHEGRLGNGDALRAPLWALQPLVVADSYASFPLFETTITEEEKARVITLKAIDVDTDPRGLSLVVLTVPAAGTLYQYEEQAPDKRGGKIDPYLFWRNTIEPVTIWPVKAYKAQNQSCCNSTDAFFALTNAITRTPCKLCGHEDPTLTFSTQFSFAIYGVFALLHNEGRPSRYNPYASPLLGYGDNYFSYCSVSPGDIDRTGVRDCANRTPGDTVQNPFQWSCPHGTENEFFEVGFAEPLYLQSVTLYENYYPGAVVSIRARVNGTAGEWVDVWSGLAQTELYDSRGNYIDGRYRIFDPPTCNTPFLVDALHVELATHKIPGWNEIESIAMTGTRALKDGVVTDPNGRVVYVPNKYANGIDEFEFTAFDCPFRRERSAVNTRIRIDVTPVNNAPVTSSPHSGTPIAVIAGTPISFALQAMDFDGGETMYFALTTVPRLGTLSPIGGGGSLSISSGLVNAGPSRKLVPSNLTLIYNSLNSRTCGDDSFSYYATDGTLTSAVVNVRLAVVCAAGSDTLNLVPIIVPIALSFVALIVAFLVAMGHASLRRKREIQRLQRLVVDYKELQVMEQLSEGAFGVVFRAEFRGTDVAIKMLKAQVGTSGGTVLSDSDSSKGKDGSGRGGGSGSSNAHTKCTARVTKVDRTGEGVDANGLSQYATKVMVATAEAGRKHDDGGGKGLILAMLSTLFRTVVTENKTRAELADFLGEIDIMCKLRHPNIVLFMGCCDKPCYVIIQEFLAGGSVLDAFARQPKWSLAMRVQMAVDAARGMAYLHSNTPPILHLDLKSPNLLLDRNLVVKVADFGLARVLVRYSAADTSVGQVGSLHWMAPEIMQGEAKCYTWHADSYSFGIVLAEFITMERPYQVYKSTGEIKTNEELLMKICLQDLRPKLPDTCPLRLSRLARECWDFRPAHRPQFDAILHRLTDILNALSNSNGGDDDAPPMPFDRPQNFNINGQDMQDGQLLPVASPCMQVRQNVAAAIAPGSAAVAVPDS* # PASA_UPDATE: g3916.t1, single gene model update, valid-1, status:[pasa:asmbl_7617,status:3], valid-1 NODE_47_length_50826_cov_42.2787 . gene 24747 29320 . - . ID=g3916;Name=g3916.t1 NODE_47_length_50826_cov_42.2787 . mRNA 24747 29320 . - . ID=g3916.t1;Parent=g3916;Name=g3916.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 29112 29320 . - . ID=g3916.t1.utr5p1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 29064 29320 . - . ID=g3916.t1.exon1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 29064 29111 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 28708 28870 . - . ID=g3916.t1.exon2;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 28708 28870 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 28376 28527 . - . ID=g3916.t1.exon3;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 28376 28527 . - 2 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 28063 28187 . - . ID=g3916.t1.exon4;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 28063 28187 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 27823 27947 . - . ID=g3916.t1.exon5;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 27823 27947 . - 1 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 27539 27723 . - . ID=g3916.t1.exon6;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 27539 27723 . - 2 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 27073 27213 . - . ID=g3916.t1.exon7;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 27073 27213 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 26604 26768 . - . ID=g3916.t1.exon8;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 26604 26768 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 26204 26256 . - . ID=g3916.t1.exon9;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 26204 26256 . - 0 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . exon 24747 25871 . - . ID=g3916.t1.exon10;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . CDS 25040 25871 . - 1 ID=cds.g3916.t1;Parent=g3916.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 24747 25039 . - . ID=g3916.t1.utr3p1;Parent=g3916.t1 #PROT g3916.t1 g3916 MPLNFEVDESLESLCELLLEDGYDMLECVSEGVPQEAADDAAQALIIIFSAARQMHKLVVWAIEKEKKRAVGTSDINGLFRNNGVPVKIIAEYMKAAGAQYLVDTLRKPMGKIIDHKNALEVDPNKATKDLSVSSMKKNFDKLLQLTELVLDAILAAEPQCPKAIKQLFKLLSQVIGKDHPDKIDITIGGFIFLRFFCPAVVSPEGFELAKAVPPPVRKNLVLISKTLQNMASGTEFGANEPYMLNANQFLRNVKPNVHTYLQTMSTLAADDFSCLDIAQLPTSVVNDGATAIYYLMHQSAKKIEKLVAERGRDVSALTAMFAELGEPIKPAKQTLKAFILDEVRRNVEEKEEAKKGTSTMKKVMHAQLVDFMKKKTKDDAHDSESSKSKHDEKMTVNDLDSILDGGRYPPTAGAGNRKSAYGDDSGSGGHTRTPSKGSAEERHAASGHSGHERTPSKGAELPLAPKRALPPRTNTLDNTVQPPLPDAPKPHSSPVAQPAHVHHVTPHAPSAPAAHTAPTDALNSSHGKDHGHSITHQVEQLATDVSEMKGWCTKVASKLSGLRSSIGVSAQLATEVKTLQADVAAIREIVRGGASSVTHNHPRNDGGAGHQQWASAKSEIEMAAQVSALNDRLMQETRARMELQKMVLDMREEMERLKENL* # ORIGINAL: g3919.t1 original gene structure, not modified by PASA NODE_47_length_50826_cov_42.2787 AUGUSTUS gene 40764 42425 . - . ID=g3919;Name=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS mRNA 40764 42425 . - . ID=g3919.t1;Parent=g3919;Name=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 42278 42425 . - . ID=g3919.t1.exon1;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 42278 42425 . - 0 ID=cds.g3919.t1;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 42053 42136 . - . ID=g3919.t1.exon2;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 42053 42136 . - 2 ID=cds.g3919.t1;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 41773 41934 . - . ID=g3919.t1.exon3;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 41773 41934 . - 2 ID=cds.g3919.t1;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS exon 40764 41602 . - . ID=g3919.t1.exon4;Parent=g3919.t1 NODE_47_length_50826_cov_42.2787 AUGUSTUS CDS 40764 41602 . - 2 ID=cds.g3919.t1;Parent=g3919.t1 #PROT g3919.t1 g3919 MDEDDAPELVPLEDSQGHAEEGAIEDAPKVPVTIVTGYLGAGKTTMINQLLNTQHNRRIAVILNDFGDGTEIEQSLAVGSNGERYDEWVELRNGCLCCSVKDMGVQAVEALMRRRGRFDYVLLETTGLADPAPVASMFWLDAELHSGLYIDGTVAVVDALNFHRHTTEAGCVPFEMQRQIAVADRVVVNKMDLVGDTDTGGERARIRSSVASINPSALVTETTRGVVDVDFLLGIGAFDPVRMEAALSSSSSPACCDASCNASDHHHHHGSHDTCEDHVHNDAADAPTKSKHGHAVGARVMTTVAFTRHGTSVALSALSRWLQSLLWDKKCPIGSANDAAIAVEIVRTKGLVSIAGEDRRYVVQGVYETFDGDFTSPWAGDARVCSFVFVGVALDGPAIQSSFDAICARV* # PASA_UPDATE: g3915.t1, single gene model update, valid-1, status:[pasa:asmbl_7619,status:12],[pasa:asmbl_7620,status:12], valid-1 NODE_47_length_50826_cov_42.2787 . gene 22028 23975 . - . ID=g3915;Name=g3915.t1 NODE_47_length_50826_cov_42.2787 . mRNA 22028 23975 . - . ID=g3915.t1;Parent=g3915;Name=g3915.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 23810 23975 . - . ID=g3915.t1.utr5p1;Parent=g3915.t1 NODE_47_length_50826_cov_42.2787 . exon 22028 23975 . - . ID=g3915.t1.exon1;Parent=g3915.t1 NODE_47_length_50826_cov_42.2787 . CDS 22649 23809 . - 0 ID=cds.g3915.t1;Parent=g3915.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 22028 22648 . - . ID=g3915.t1.utr3p1;Parent=g3915.t1 #PROT g3915.t1 g3915 MDLVDFVDNIYNKRIRAVLEPAGIKRKVNHRKYLQRQLQRSVSETPSSPGTVPSDASSAAAAVHKPAVQPTQASISATTRPVAPRRLTQSWAGVSEHQRANMFEFTFSKPKVPKAGSKAARKSDAQKTQLSAAPAPSHMPQQQQQFVSLAASAPASTLRSLSPVITATSPMGLPVVQAPNPAQPYMVVFMINPAQQQQQQQQQQQQQQQQQQHLQLPLHLQVPLPASTGHSPASSVYEDDADFDAEQPSSPLSDAEVEQLQRQVQHQFGLSSTPSHSVYAATPENLRMLSYLSAQQSHGNSAAIAEEQDAETDAEGHSAYGVQDIASNAAAYSPSSQTSAAEEDDDDLVPCYFDQTLHADMELCPLTQSLEARLIREVFLDGPIDC* # PASA_UPDATE: g3917.t1, single gene model update, valid-1, status:[pasa:asmbl_7622,status:12],[pasa:asmbl_7623,status:12],[pasa:asmbl_7629,status:12], valid-1 NODE_47_length_50826_cov_42.2787 . gene 29659 34011 . + . ID=g3917;Name=g3917.t1 NODE_47_length_50826_cov_42.2787 . mRNA 29659 34011 . + . ID=g3917.t1;Parent=g3917;Name=g3917.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 29659 29919 . + . ID=g3917.t1.utr5p1;Parent=g3917.t1 NODE_47_length_50826_cov_42.2787 . exon 29659 30085 . + . ID=g3917.t1.exon1;Parent=g3917.t1 NODE_47_length_50826_cov_42.2787 . CDS 29920 30085 . + 0 ID=cds.g3917.t1;Parent=g3917.t1 NODE_47_length_50826_cov_42.2787 . exon 30269 34011 . + . ID=g3917.t1.exon2;Parent=g3917.t1 NODE_47_length_50826_cov_42.2787 . CDS 30269 33837 . + 2 ID=cds.g3917.t1;Parent=g3917.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 33838 34011 . + . ID=g3917.t1.utr3p1;Parent=g3917.t1 #PROT g3917.t1 g3917 MDELQKLERLSLVAKVCTELENHLGMNDKVLAEFIISLAAKNDTPEKFKKALMQNGAELPESFIGNLLKLIQRMQPSKSKGKKPASAAAPTSELSAEAQSALERKKTLLPGLAIPNKIVPIEDDVPPPAAPAHVPAPAPDVATGGSTMDQLEMLLNREKEQALLSVKEAEEAKKRKPDEVDGDEDRRKRHRGKSRSRSRSRSRSRSPRRGRWDDDRRRDGDRGRDGDRGSRGDADRERDRDRDRDRRDTRGGDVRVDVRDNARRAGPPSGLDVEPIIGKIYDGKVSNTMDFGCFVQMEGLAGRREGLVHVSELRREGRVTQVTDVVKKGQSVKVKVKSIAGTRVSLSMKDVDQTTGEDLNPRVGLTGANFEPLGGAAKKGAVSGIPDEFARNPDANPSIRTSAIVEDEDIGARSGVKKLSSPEKWELKQLIAAGVIDKREYPDFDEELGLLPVNEEVEDIEDVEIELREEEPPFLRGQTKLATELSPVRIVKNPDGSLQRAAMTQTSLAKERREIREAQRQAEQDSVSYTEVNKQWVDPVPEERQFAQAVRGSNQKEPEVPEWKKAFGKGVTFGKQTKLSIIDQRASLPIYKLKQQLLKAIEDNQILIVIGETGSGKTTQMTQYVTEAGYTMRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGAEVGYTIRFEDCTAPETVIKYMTDGMLLRECLIDPDLKQYSVLMLDEAHERTIHTDVLFGLLKQTIQKRPDLKLIVTSATLDAEKFSSYFFGCPIFTIPGRTFPVEILYTKDAESDYLDASLITVMQIHLTEPPGDVLLFLTGQEEIDTSCEILFERMKALGPEVPELLILPVYSSLPSEMQSKIFDPAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQNVYDAKTGMDQLVVTPISQAQARQRAGRAGRTGPGKCYRLYTERAYRDEMLPTNVPEIQRTNMASTVLSLKAMGINDLLGFDFMDPPPAQTLVSAMESLHSLGALDDEGLLTRLGRKMAEFPLEPPLAKMLIQSVALGCSEEALTLVAMLSVQNVFYRPKDKQAQADQKKAKFHQAEGDHITLLAVYNSWKNNKFSNPWCFENFLQARTLRRAQDVRKQMLGIMDRYKLDIVSCGKNYNKVRRALVSGFFRNAAKKDPQEGYKTIVDNQHVYIHPSSAIFGRQPEWVLYHEVIMTTKEYMRECTAIEAKWLVEFAPAFFKMGDPTRMSKRKRMERIEPLYNRYEEPNEWRISRTRIRKA* # PASA_UPDATE: g3918.t1, single gene model update, valid-1, status:[pasa:asmbl_7624,status:12],[pasa:asmbl_7625,status:12],[pasa:asmbl_7630,status:12],[pasa:asmbl_7631,status:12], valid-1 NODE_47_length_50826_cov_42.2787 . gene 34386 40004 . + . ID=g3918;Name=g3918.t1 NODE_47_length_50826_cov_42.2787 . mRNA 34386 40004 . + . ID=g3918.t1;Parent=g3918;Name=g3918.t1 NODE_47_length_50826_cov_42.2787 . five_prime_UTR 34386 34614 . + . ID=g3918.t1.utr5p1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 34386 34701 . + . ID=g3918.t1.exon1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 34615 34701 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 34837 34933 . + . ID=g3918.t1.exon2;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 34837 34933 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 35145 35800 . + . ID=g3918.t1.exon3;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 35145 35800 . + 2 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 36279 36406 . + . ID=g3918.t1.exon4;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 36279 36406 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 36726 36918 . + . ID=g3918.t1.exon5;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 36726 36918 . + 1 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 37428 37508 . + . ID=g3918.t1.exon6;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 37428 37508 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 37751 37849 . + . ID=g3918.t1.exon7;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 37751 37849 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 38028 38591 . + . ID=g3918.t1.exon8;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 38028 38591 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . exon 38924 40004 . + . ID=g3918.t1.exon9;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . CDS 38924 39643 . + 0 ID=cds.g3918.t1;Parent=g3918.t1 NODE_47_length_50826_cov_42.2787 . three_prime_UTR 39644 40004 . + . ID=g3918.t1.utr3p1;Parent=g3918.t1 #PROT g3918.t1 g3918 MANIIAPPPEFQPPKAWEVDLGLLPDNWESLVDEDGMRFYIDHNTKTTSWIPPREAVLNWDDEQTLPYGWEMAVDEDGDPYFIDHNNRTTTRQDPRLAGYSRSPAPAMPSSLSAGGSGTTTKSLSPSASGARKASTVPMPLGGSAIPPPLQELQAQRAAANAPPPAPVVVQEEGDKVLRVAFDNGQTRSFRYGASTRAEDMRNIICEKLGIRISSHFGLVIQGEGGFAKWLPPHVTLVEAESGLPAGASWKYCFRGRYLPKQMADLVNRDDIAFDLLLNQVMADVSKGSFKEIDYTKAVELAGLHVNWWLQTNNKKLDMDVIIDEVGLDKFIATSVCSGMKPKEVGKAIKAAVKAIGKTSAQDSVTKYVALVCDLKEYGGKYYRVQVETGNSKVANRILISARYGIGKVSDDGQVTSMTSFDRIRAFDLKPVDAKKSIIDVALDGLSAIRITGETSDLEDMMVFINGYYQLFVTASASLLSPSAPPAPPSMIPGPPIPRAATISNPMGKGAPSAPPPPAIGGGGSGGGGGFGPGSAGFGAALSGVQLKKRPQSEQVGGKGGVAPGAIDLSMIANARKNMRQTGALEMKEDGATFEFKRVVLRSTTASQNKSTPKYESAHSLVGNYNKDRDQFETRVVDFAEAPKYRLRKTGIDLTKDRFEKTADAPSPSRSRQVEAAPAPTPTPAPAPTPTPTPTSAHTPTPAPIPTPTPVPVPVSVPSEFSTPDAPSAVPSDGGFLPPPPEFGLPSAPPPPPMGFDDDIPPPIPSVPSGFADEAPPPAVVTPPVVVAAPEPTRDPFVAKITTGSMFSAEAYGNSLSMLDNSDSLGMLASIGAAFGGDDPMISGGLASMLSDDDEDEEYEEDEEEEEEEEEEEN* # PASA_UPDATE: g4662.t1, single gene model update, valid-1, status:[pasa:asmbl_717,status:3], valid-1 NODE_1190_length_13266_cov_41.3126 . gene 4529 5450 . - . ID=g4662;Name=g4662.t1 NODE_1190_length_13266_cov_41.3126 . mRNA 4529 5450 . - . ID=g4662.t1;Parent=g4662;Name=g4662.t1 NODE_1190_length_13266_cov_41.3126 . five_prime_UTR 5404 5450 . - . ID=g4662.t1.utr5p1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . exon 5397 5450 . - . ID=g4662.t1.exon1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . CDS 5397 5403 . - 0 ID=cds.g4662.t1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . exon 5234 5295 . - . ID=g4662.t1.exon2;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . CDS 5234 5295 . - 2 ID=cds.g4662.t1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . exon 5036 5110 . - . ID=g4662.t1.exon3;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . CDS 5036 5110 . - 0 ID=cds.g4662.t1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . exon 4739 4854 . - . ID=g4662.t1.exon4;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . CDS 4739 4854 . - 0 ID=cds.g4662.t1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . exon 4529 4591 . - . ID=g4662.t1.exon5;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . CDS 4543 4591 . - 1 ID=cds.g4662.t1;Parent=g4662.t1 NODE_1190_length_13266_cov_41.3126 . three_prime_UTR 4529 4542 . - . ID=g4662.t1.utr3p1;Parent=g4662.t1 #PROT g4662.t1 g4662 MGDYDDVDIYGDIGAKSLPSYEEVAKRLTEASAQNEDHRKRIERLEKENALLTQQNVSLKKNISCLYKTAKAEIDRKDEENAEIRKRLESLQQQSRSSTRPR* # PASA_UPDATE: g4661.t1, single gene model update, valid-1, status:[pasa:asmbl_721,status:3], valid-1 NODE_1190_length_13266_cov_41.3126 . gene 3410 4400 . + . ID=g4661;Name=g4661.t1 NODE_1190_length_13266_cov_41.3126 . mRNA 3410 4400 . + . ID=g4661.t1;Parent=g4661;Name=g4661.t1 NODE_1190_length_13266_cov_41.3126 . five_prime_UTR 3410 3519 . + . ID=g4661.t1.utr5p1;Parent=g4661.t1 NODE_1190_length_13266_cov_41.3126 . exon 3410 3675 . + . ID=g4661.t1.exon1;Parent=g4661.t1 NODE_1190_length_13266_cov_41.3126 . CDS 3520 3675 . + 0 ID=cds.g4661.t1;Parent=g4661.t1 NODE_1190_length_13266_cov_41.3126 . exon 3784 4400 . + . ID=g4661.t1.exon2;Parent=g4661.t1 NODE_1190_length_13266_cov_41.3126 . CDS 3784 4182 . + 0 ID=cds.g4661.t1;Parent=g4661.t1 NODE_1190_length_13266_cov_41.3126 . three_prime_UTR 4183 4400 . + . ID=g4661.t1.utr3p1;Parent=g4661.t1 #PROT g4661.t1 g4661 MSSNEDASDTPMDGKKDGHERKGRRKINIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFATPKLQPLITKPEGKNMIQSCLNAPDNPTPQAASAASQPRAANYPEGYTGGAEEAGADKAFYASGQVVQPYPSYGANMPYSYLNAGPPQYLTPWPGGATGNAPTTE* # ORIGINAL: g4660.t1 original gene structure, not modified by PASA NODE_1190_length_13266_cov_41.3126 AUGUSTUS gene 46 2586 . - . ID=g4660;Name=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS mRNA 46 2586 . - . ID=g4660.t1;Parent=g4660;Name=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 2298 2586 . - . ID=g4660.t1.exon1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 2298 2586 . - 0 ID=cds.g4660.t1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 1983 2155 . - . ID=g4660.t1.exon2;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 1983 2155 . - 2 ID=cds.g4660.t1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 1647 1732 . - . ID=g4660.t1.exon3;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 1647 1732 . - 0 ID=cds.g4660.t1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 1307 1366 . - . ID=g4660.t1.exon4;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 1307 1366 . - 1 ID=cds.g4660.t1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 630 736 . - . ID=g4660.t1.exon5;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 630 736 . - 1 ID=cds.g4660.t1;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 46 239 . - . ID=g4660.t1.exon6;Parent=g4660.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 46 239 . - 2 ID=cds.g4660.t1;Parent=g4660.t1 #PROT g4660.t1 g4660 MPSYPTAFIALAVAISLALSQCYFADATPAEYGHTGDYASFGADHDNLTCTFYDKNIYLCSDGSLYESGCVHSHYEPGERNFYIYVFTCLGLVVFAGLMSGLTMGLLSLDIMNLTVMMNSGVGNEAIYAARLIPIVKKRHFLLVTLVLSNAAAMETLPIFLDRVTNPIVAVVLSTTLVLVFGEIIPQALCRRYGLSIGANLTWLVKFLMFVLSPIAWPISVVLDCIFGAEETNFMRRAELKELVLMHAQFDRRNAEPLLPDEVTIIKGALEMRTKIAREVMTPIARVMMLDVNGVLDDRTMQM # ORIGINAL: g4663.t1 original gene structure, not modified by PASA NODE_1190_length_13266_cov_41.3126 AUGUSTUS gene 8670 12385 . + . ID=g4663;Name=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS mRNA 8670 12385 . + . ID=g4663.t1;Parent=g4663;Name=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 8670 11648 . + . ID=g4663.t1.exon1;Parent=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 8670 11648 . + 0 ID=cds.g4663.t1;Parent=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 11830 12116 . + . ID=g4663.t1.exon2;Parent=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 11830 12116 . + 0 ID=cds.g4663.t1;Parent=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS exon 12280 12385 . + . ID=g4663.t1.exon3;Parent=g4663.t1 NODE_1190_length_13266_cov_41.3126 AUGUSTUS CDS 12280 12385 . + 1 ID=cds.g4663.t1;Parent=g4663.t1 #PROT g4663.t1 g4663 MRPNNRGLFYTCSVSSGNSNGNLNLNNVSISTSTDAAAIDLSIPLFGIFGGLNLDLDSVVPQDLSAALYEHPLSRRDTNINENGVNSQNANANSNNNSITLIINIDLVFPTELLLAGVQRRGSDRNENTNYVNSANTNGNSNDNSVYVNSTIRVIDILVEPLLGIGRRSAEDSNENTNSVNDANSNGNANNNTIAMYLDSAAAAIDLSLPLFSMLDGIVPLALPHPLARRYSGDVNVNKNNVSSSNTNSNANSNAINLVVNINILLPVNFSSIDSFRAARSLGQDKNINSNTVDSSNVNGNANSNSVLFNETSRVFVLDLSIPFLDGVVRRDVEEKNENTNEIGSSNANGNANTNDVTLDDDALVLAIEAIIPIFRRGFGYGSPADKNENTNFVSSSNVNGNANTNNVTVDVDALVIAADVELPIIFRRGAPSGEKNENTNGVSSSNANGNENTNDVYVDADSLAAAVEAIIPILVARRGAPSGTKNENTNFVTSSNVNGNANTNNVTVDGDVLVIAADVELPIIFRRGAPSGEKNENTNAVGSSNANGNENTNAVSVDADTLAAAVEAVIPIIVRRGAPSGSKNENTNSVSSSNSNGNSNTNGVSVDSDVLAVAGDIELFINLTRRGAPSGENENTNGVSSFNANGNDNTNVVYVDADTLAAAVEAVIPIIVARRGAPSGDKNENTNAIGSSNANGNENTNAVSVDADTLAAAVEAVIPIIVSRRGAPSRDKNENTNAIGSFNANGNENTNAVSVDADTLAVAVEAVIPIVERRGAPSGTKNENTNGVSSFNANGNENTNDVTVDGDVLVIAADVELPIVARRGAPSGEKNENTNAVGSSNANGNSNTNGVSVDSDALVIAADVEIPLSNRRSARADKNKNTNSVNSANSNGNSNSNDVSVDLDALAIAAIIDLFPTPVPEPLVPERILQRRGPSSGDRNINNNGVNSQNSNGNSNVNAIDFEFDADAIALDLIIDVIPTSIPEPPPLAPFMERRGAPSGDRNINTNGVTSGNANGNSNTNTINLEVNVNLVAAGAELELAPTRRESAEPGVLHLESRMYEVEGESLVERRLAPGGGPGGDRNENENFVNSGNSNGNANTNAVDVDNDTVGVAVTLSLPPIF* # PASA_UPDATE: g1364.t1, single gene model update, valid-1, status:[pasa:asmbl_10079,status:12], valid-1 NODE_948_length_15593_cov_39.5795 . gene 203 1882 . - . ID=g1364;Name=g1364.t1 NODE_948_length_15593_cov_39.5795 . mRNA 203 1882 . - . ID=g1364.t1;Parent=g1364;Name=g1364.t1 NODE_948_length_15593_cov_39.5795 . five_prime_UTR 1708 1882 . - . ID=g1364.t1.utr5p1;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . exon 1686 1882 . - . ID=g1364.t1.exon1;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . CDS 1686 1707 . - 0 ID=cds.g1364.t1;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . exon 765 1238 . - . ID=g1364.t1.exon2;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . CDS 765 1238 . - 2 ID=cds.g1364.t1;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . exon 203 272 . - . ID=g1364.t1.exon3;Parent=g1364.t1 NODE_948_length_15593_cov_39.5795 . CDS 203 272 . - 2 ID=cds.g1364.t1;Parent=g1364.t1;3_prime_partial=true #PROT g1364.t1 g1364 MDPKAQYGAPYNPYAAGPGMPGTYQYPPAAAPGMPQQPPTPYGTSGQVANPAQYGSPYGSGAQMPQYGPPPAPYGPSGMPPQYGAPQGQPAPYQYGAPQQQPQQPQYAPQGGPPLASTPSGGVAGDLPPQFSNLPPGELPAGPTAPPADLFPALPGYEAVGNAPEGFAQLPPAYEPPVQPVAARNYRI # PASA_UPDATE: g1367.t1, single gene model update, valid-1, status:[pasa:asmbl_10074,status:12],[pasa:asmbl_10077,status:12], valid-1 NODE_948_length_15593_cov_39.5795 . gene 11893 14944 . + . ID=g1367;Name=g1367.t1 NODE_948_length_15593_cov_39.5795 . mRNA 11893 14944 . + . ID=g1367.t1;Parent=g1367;Name=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 11893 11943 . + . ID=g1367.t1.exon1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 11893 11943 . + 0 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 12090 12145 . + . ID=g1367.t1.exon2;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 12090 12145 . + 0 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 12552 12848 . + . ID=g1367.t1.exon3;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 12552 12848 . + 1 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 13187 13400 . + . ID=g1367.t1.exon4;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 13187 13400 . + 1 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 13677 13813 . + . ID=g1367.t1.exon5;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 13677 13813 . + 0 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 14089 14190 . + . ID=g1367.t1.exon6;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 14089 14190 . + 1 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . exon 14516 14944 . + . ID=g1367.t1.exon7;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . CDS 14516 14636 . + 1 ID=cds.g1367.t1;Parent=g1367.t1 NODE_948_length_15593_cov_39.5795 . three_prime_UTR 14637 14944 . + . ID=g1367.t1.utr3p1;Parent=g1367.t1 #PROT g1367.t1 g1367 MGGGHGNHEDLHRSVNLTDAELAAMSPDDLEIHNARVKHQNFHKEHEGHEEMHAEIFFILVACLIIGQVGLFLWKKHHYRSYQAATLVGMWLIAFLFSLYLDYSRFVFVWIVYTMCTGFITFRATRKPLEQHTPRLVYKFFTIMYKVTYGAGISGYFLLMLDFFVMTPEFFLSAIGGTLMFYGLYFGVLNRDFAELCSSQMASTIGYYTESGLPKKTLDPNICSICCENLAPVGAPEDELSEKTCQLSCKHLFHEFCIKGWCIIGKKEICPYCREKVDLKKQFSNPWEKQDLLYGNLLDAIRYFVLWQPVIMFIVQNIISLSGLK* # PASA_UPDATE: g1366.t1, single gene model update, valid-1, status:[pasa:asmbl_10080,status:3], valid-1 NODE_948_length_15593_cov_39.5795 . gene 7367 11345 . - . ID=g1366;Name=g1366.t1 NODE_948_length_15593_cov_39.5795 . mRNA 7367 11345 . - . ID=g1366.t1;Parent=g1366;Name=g1366.t1 NODE_948_length_15593_cov_39.5795 . five_prime_UTR 11155 11345 . - . ID=g1366.t1.utr5p1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . exon 9742 11345 . - . ID=g1366.t1.exon1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . CDS 9742 11154 . - 0 ID=cds.g1366.t1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . exon 9315 9511 . - . ID=g1366.t1.exon2;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . CDS 9315 9511 . - 0 ID=cds.g1366.t1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . exon 8577 9071 . - . ID=g1366.t1.exon3;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . CDS 8577 9071 . - 1 ID=cds.g1366.t1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . exon 7367 8163 . - . ID=g1366.t1.exon4;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . CDS 7770 8163 . - 1 ID=cds.g1366.t1;Parent=g1366.t1 NODE_948_length_15593_cov_39.5795 . three_prime_UTR 7367 7769 . - . ID=g1366.t1.utr3p1;Parent=g1366.t1 #PROT g1366.t1 g1366 MARFCASIVVCIALLAVLARGMPTSSFGLTGTYYNNTATAGDSALVRVDPSIDFVFSTAPIDGSDGSFFSVLWTGRMVVAMPGKYNFSVSTNGAIRLWVLDHLLIDDGNNAGSDRIIQGTVSVPMDPLHPAEIRVECVFYALSANAPAIKVSWANATGAAEGDNTLPHILTDGAVLLPDSSDAEVQRRKLYSSLVSGWGTHVNDNMLAFALLPQGFALGLGLYDTATGDYLSKTIVNRKGSDLFVHPGPHTRTPFYAEITRVSWRGFDALIQASEDANGDLSVLVTPLSNSTDASTVVVVASPSMTFGRAGDITVDSSGNMLARLPGFKSISVVSGGTALAGNYIKGVALPYAVFVAATPISFCIQTDASLPVVTASCNASTLASKLAQSRMVTLNGFASYGNLSDAYAAMRTVISWNSVYVPQEGSIVTPVSRGWDYSNAGYVLYDWDTYFCAMMAAVDDRDVAYANLIQVTKTKTVYGFVPNEKGGTVASWDRTEPIVGSMALLAIYNKFNDDWVVDLLFDDLFDWNTWMWQKRRAAEGYIQLGSDPNVPGSAPDIDTLQAARYESGLDNSPMYDDSDAQYNTSTHRMMLGDVGMTSLFLTDCECLREIASRTGRRAQMAALAVRFDGVLGSMKKGMWSQKEGLYMNVKTDAADEGRFATRLSPTHFYPLLAGAMTYSQAEDAIASHMRNPDEFCLGKCDYGLPSIARNDPAFPDNSYWRGRTWAPMNFLVYLGLRRYPDSHAASDAIDDLTESGLRLLLGEWADGHVHENYNTITGEGCDVESSDPFYHWGALHAYIALCEAGYMDPLPLGGSASGASTVALGAERSLS* # ORIGINAL: g1365.t1 original gene structure, not modified by PASA NODE_948_length_15593_cov_39.5795 AUGUSTUS gene 2883 6933 . - . ID=g1365;Name=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS mRNA 2883 6933 . - . ID=g1365.t1;Parent=g1365;Name=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 6801 6933 . - . ID=g1365.t1.exon1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 6801 6933 . - 0 ID=cds.g1365.t1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 5713 6444 . - . ID=g1365.t1.exon2;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 5713 6444 . - 2 ID=cds.g1365.t1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 5257 5425 . - . ID=g1365.t1.exon3;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 5257 5425 . - 2 ID=cds.g1365.t1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 4545 4842 . - . ID=g1365.t1.exon4;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 4545 4842 . - 1 ID=cds.g1365.t1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 3880 3982 . - . ID=g1365.t1.exon5;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 3880 3982 . - 0 ID=cds.g1365.t1;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS exon 2883 3532 . - . ID=g1365.t1.exon6;Parent=g1365.t1 NODE_948_length_15593_cov_39.5795 AUGUSTUS CDS 2883 3532 . - 2 ID=cds.g1365.t1;Parent=g1365.t1 #PROT g1365.t1 g1365 MANNSAGHSCSGPRAYYGAIAALFFAFSFVALAFVVPVSAGAAAGIATDFEDWEAEISKWAEEFTQWAYSSGCPVDGLLATAEWDAIRNNNGSVAALTRVDAVNAFHSALSSWKSLGGGCVVACPSPDDPAAGSSDKCLWRGEYPYGVRAPASEGNAACTTGWLDPPSSSGGAYGVCGCASTTDPKDNTDRLVSCRWLSGAVPNGETVHTGHPESCITRVVAPSPKQPSASKASVCSCPSVDDPGYSETNCAYMSGFVPPNLRVAQNTMCFFSTPTAPSASTGLLVCQPTPGSNPPAPSNFFSEILSIHSSWGSGYWGFPPGSGSAAAYAAISREITHGATNDIRAEYAAAVQTPGLANQWLALLSASETQHSIQALLDNAGGPYCDDSCLQSAVSVLLVEFQDVSIVSSYCELLNNLADAIAQTIQANVAWAEGQVETSASNTVKPPKPLGHFVLDLLNVVLSSLTFVLNAPAAIAINIAQSIVADVNSDASDPYWDENAQLTQAVSVLMSAINSGVLSFKGSMASRFSAAATDPLQLRILAATLFSGGADATLPTASTVDGYLATYGTTVIQQRLVRLLFASKWDVCYAVSYGEKKDSWYLNCKASKEDDYPMSYDRWYVANKNAAWICPGGKYNSGELVDLSVYASAGASGTEQSLVVATMTGNTQGFLDDGWSQLSVQRCPKDCDSISCG* # ORIGINAL: g14009.t1 original gene structure, not modified by PASA NODE_873_length_16445_cov_38.6641 AUGUSTUS gene 3619 7459 . - . ID=g14009;Name=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS mRNA 3619 7459 . - . ID=g14009.t1;Parent=g14009;Name=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 6967 7459 . - . ID=g14009.t1.exon1;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 6967 7459 . - 0 ID=cds.g14009.t1;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 6502 6693 . - . ID=g14009.t1.exon2;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 6502 6693 . - 2 ID=cds.g14009.t1;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 4698 5972 . - . ID=g14009.t1.exon3;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 4698 5972 . - 2 ID=cds.g14009.t1;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 3984 4338 . - . ID=g14009.t1.exon4;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 3984 4338 . - 2 ID=cds.g14009.t1;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 3619 3778 . - . ID=g14009.t1.exon5;Parent=g14009.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 3619 3778 . - 1 ID=cds.g14009.t1;Parent=g14009.t1 #PROT g14009.t1 g14009 MGIAPKTLTLRYWIHRTRGVSDPTLHRQTSGVCTYQMAPIPASRILVAAVFISIACLASPIGCAITMTSFTAPSNLWQGQYLATVRGTNLTAVSTIIMRDAQNHIARCIVSPNNINSTYLQCIVPAWSPQWRITWADTSSSPVSVYINATDSAVSSLANVFTYSFACLSQNFYCDPDCASYHWCNGGILFQQQMCQVNTPSCFAIGNFSIPDTSTPCTPVPGGVKCYSYNQDFPFNPNGGSSKPVVPVVVAVVATVGVGTLAVAGAAATGLISGNATLATSVPVGFGIMVAAAKRAFGRKKKEGEGKGEGEGDDSEGGGGDVAGGGEATRMADSIVMGVIPNHFLKDAPDVSPQAIVLPDTDAKLVEELHRCAENGDAETLALTVGVLETMWLAGASKTALIEEPSVAGDTAMLMACRRGHVTCVQQLLAHGASPSKAGGREHETPLHAAVVGGSRDCVALLLAALSTAKIAPADATDEHTEGARAIRPIDAKNAQRDAPVHVACALGVVSAVELLVKAGCDCERVDSMGRTPLAVAIATGHEDCALRIIANTRRAGVRMRDSRRGWNALHWAAASNEAGVIAALHGAGHLVALESVGGVPSPGSDDQMEDNPLNAAAKNGETPVCIAARQGNLAAFEALVVVGADTAIVDDEGRGPLDYAAKMGLTVPLLSITTSDGSAPMDITTPLGSDAVDRATVGSWETSGGGSDVEMSGFVPETVGGMRAVSFAPDVRQSPDWDVLAMGFGDAGDAGAAGTDPRQLKLRKHRESNQKSRQQKRKREAGLQKVVDDLEVENAEIAGQIAELEQEAKRLRVILAEHDAARD* # ORIGINAL: g14008.t1 original gene structure, not modified by PASA NODE_873_length_16445_cov_38.6641 AUGUSTUS gene 392 2647 . + . ID=g14008;Name=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS mRNA 392 2647 . + . ID=g14008.t1;Parent=g14008;Name=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 392 792 . + . ID=g14008.t1.exon1;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 392 792 . + 1 ID=cds.g14008.t1;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 1026 1207 . + . ID=g14008.t1.exon2;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 1026 1207 . + 2 ID=cds.g14008.t1;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 1414 2169 . + . ID=g14008.t1.exon3;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 1414 2169 . + 0 ID=cds.g14008.t1;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 2465 2647 . + . ID=g14008.t1.exon4;Parent=g14008.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 2465 2647 . + 0 ID=cds.g14008.t1;Parent=g14008.t1 #PROT g14008.t1 g14008 PQLQQLRERYQLFERAWNAMRPRVIRSDSQDTFIDPMSETASLSRCCLELSKEESDGSQLCAIVQHLAGIQNEFLMRTLEIAERTTGHADDGDVNDRGGHGNQDNGTAASRVALVGAGAGHQRTCIGARAGCAVRVDDRDDGDGEDSELLLMKKATLYTSCDLRYGLGKEARTDFDKMEAVLAMELIVGKKRLDASHLDDAGFVFAGEGYVKHVTLLKQVADKVPQRPLSEDIALRLGQGDAFGTRHHGVAGADSLLSTLEVMLLYLRQTGGDPNRLLGDYTAQWLGSNRVPSALLQDGSLSSVTLAQVVALYEAVEDVVAAPVADCAGEAYRVVLSEEDEATFASCLSYSGGVLRASAAASMLRRLIFRYLSKGHQVLHPDMCLVDALRNLTWPSNSYLRSNDFEGMGVEGEAKVRERLYSAFPTTLRVMHSHSAHSVASKAAQQEQQREARRRALEGGRVPPNRPWVTTDPRSARASQSQHAGAPSRGARPASQLTSELDVLGL* # ORIGINAL: g14010.t1 original gene structure, not modified by PASA NODE_873_length_16445_cov_38.6641 AUGUSTUS gene 8357 10523 . - . ID=g14010;Name=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS mRNA 8357 10523 . - . ID=g14010.t1;Parent=g14010;Name=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 10463 10523 . - . ID=g14010.t1.exon1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 10463 10523 . - 0 ID=cds.g14010.t1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 9740 9813 . - . ID=g14010.t1.exon2;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 9740 9813 . - 2 ID=cds.g14010.t1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 9509 9600 . - . ID=g14010.t1.exon3;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 9509 9600 . - 0 ID=cds.g14010.t1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 9061 9268 . - . ID=g14010.t1.exon4;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 9061 9268 . - 1 ID=cds.g14010.t1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 8607 8712 . - . ID=g14010.t1.exon5;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 8607 8712 . - 0 ID=cds.g14010.t1;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS exon 8357 8412 . - . ID=g14010.t1.exon6;Parent=g14010.t1 NODE_873_length_16445_cov_38.6641 AUGUSTUS CDS 8357 8412 . - 2 ID=cds.g14010.t1;Parent=g14010.t1 #PROT g14010.t1 g14010 MILWMPPFPPSLQLQLGGDKDDDPAKIGPEGIEKFCNDIGIAPGHVVVLIIAWRLGAAAMCYFSRGEWMTGMHKLNVDTPEKMRALLPKLPDMSPAEFKELYRYSFDFARDPSQKSLEIETAKEMLALLLEHRWPSLGQFLEYLGGAISYKVINKDQWMSIFEFSSTIKPDLSNYDEMGAWPVVLDEFVEWLRDGHRI* # PASA_UPDATE: g14011.t1, single gene model update, valid-1, status:[pasa:asmbl_9787,status:12], valid-1 NODE_873_length_16445_cov_38.6641 . gene 11476 16215 . + . ID=g14011;Name=g14011.t1 NODE_873_length_16445_cov_38.6641 . mRNA 11476 16215 . + . ID=g14011.t1;Parent=g14011;Name=g14011.t1 NODE_873_length_16445_cov_38.6641 . five_prime_UTR 11476 11602 . + . ID=g14011.t1.utr5p1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 11476 11725 . + . ID=g14011.t1.exon1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 11603 11725 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 12071 12265 . + . ID=g14011.t1.exon2;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 12071 12265 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 12763 12944 . + . ID=g14011.t1.exon3;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 12763 12944 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 13138 13264 . + . ID=g14011.t1.exon4;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 13138 13264 . + 1 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 13417 13497 . + . ID=g14011.t1.exon5;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 13417 13497 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 13784 13915 . + . ID=g14011.t1.exon6;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 13784 13915 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 14315 14430 . + . ID=g14011.t1.exon7;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 14315 14430 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 14703 14797 . + . ID=g14011.t1.exon8;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 14703 14797 . + 1 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 15087 15232 . + . ID=g14011.t1.exon9;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 15087 15232 . + 2 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 15424 15485 . + . ID=g14011.t1.exon10;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 15424 15485 . + 0 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 15734 15835 . + . ID=g14011.t1.exon11;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 15734 15835 . + 1 ID=cds.g14011.t1;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . exon 16069 16215 . + . ID=g14011.t1.exon12;Parent=g14011.t1 NODE_873_length_16445_cov_38.6641 . CDS 16069 16215 . + 1 ID=cds.g14011.t1;Parent=g14011.t1;3_prime_partial=true #PROT g14011.t1 g14011 MLGRTVGGMAVNTNGGTSPGIPGIKEITVKLSTGELISRLKALMNYLSEADQEANTTLIAPYAASLVKSGIIHNPDKDVRLLVACCLADVLRIFAPDAPYTEPELKTIFTLFTEQLRGIELTASPNFSRVFYLLESLAIVKSFVICTELRADDIILDLFKMLFEIVSEKHAHNVISHMLDIMASVIEEGQGLNQDMLEIVFQNILEPNKTDNPVAFSLAKTLIVRTTNSLQPHVHEFFANLLNGGESELSDRVYDLIQELSSLAPNTLLYVLPQLEEQLKVEDQDIRLKVTRLLGLMFAAKDSDLVRVKTSLWVGFLKRSNDISPAIRTEMVNHAKNVMVNHPENAREVAEELKKRINDADEKVRLAAVGAVVDAVAHNADAVPYVLLQTISERILDKKFAIRKEAVNGLGALYQSIVNKHGDAEEWTSDLSEKYAWIPTSIMSGYHLDDISTRLVIERVFDRLLVSHAATAEERARQLASVYASLDVKAEKGFQQMLKAKR # PASA_UPDATE: g3847.t1, single gene model update, valid-1, status:[pasa:asmbl_5053,status:12], valid-1 NODE_2803_length_5085_cov_42.8285 . gene 3901 4968 . + . ID=g3847;Name=g3847.t1 NODE_2803_length_5085_cov_42.8285 . mRNA 3901 4968 . + . ID=g3847.t1;Parent=g3847;Name=g3847.t1 NODE_2803_length_5085_cov_42.8285 . five_prime_UTR 3901 3956 . + . ID=g3847.t1.utr5p1;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . exon 3901 4025 . + . ID=g3847.t1.exon1;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . CDS 3957 4025 . + 0 ID=cds.g3847.t1;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . exon 4180 4321 . + . ID=g3847.t1.exon2;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . CDS 4180 4321 . + 0 ID=cds.g3847.t1;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . exon 4409 4503 . + . ID=g3847.t1.exon3;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . CDS 4409 4503 . + 2 ID=cds.g3847.t1;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . exon 4690 4968 . + . ID=g3847.t1.exon4;Parent=g3847.t1 NODE_2803_length_5085_cov_42.8285 . CDS 4690 4968 . + 0 ID=cds.g3847.t1;Parent=g3847.t1 #PROT g3847.t1 g3847 MRHLLTQVHISSVLLRLGYALSTIFGFILVCTAATASANQDNCRFTFRSSSHSNDVIAFSWFACKYPIFQGAFVTLAGIVGLVISLGVGRNPNNVPLIVRLVGLAFCIFIAAASLFSGVLLTWNIRNTCDQIKANEPHRTQCDYYNTSNGRMNFPYETFVAAEACTYITGIAWVGVVGPSLCANNVVRLFEDSV* # PASA_UPDATE: g3845.t1.1.5b6be70b, single gene model update, valid-1, status:[pasa:asmbl_5051,status:3], valid-1 # PASA_UPDATE: g3845.t1, single gene model update, valid-1, status:[pasa:asmbl_5052,status:12], valid-1 NODE_2803_length_5085_cov_42.8285 . gene 186 1762 . + . ID=g3845;Name=g3845.t1 NODE_2803_length_5085_cov_42.8285 . mRNA 186 1762 . + . ID=g3845.t1.1.5b6be70b;Parent=g3845;Name=g3845.t1 NODE_2803_length_5085_cov_42.8285 . five_prime_UTR 186 247 . + . ID=g3845.t1.1.5b6be70b.utr5p1;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . exon 186 1015 . + . ID=g3845.t1.1.5b6be70b.exon1;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . CDS 248 1015 . + 0 ID=cds.g3845.t1.1.5b6be70b;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . exon 1427 1762 . + . ID=g3845.t1.1.5b6be70b.exon2;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . CDS 1427 1717 . + 0 ID=cds.g3845.t1.1.5b6be70b;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . three_prime_UTR 1718 1762 . + . ID=g3845.t1.1.5b6be70b.utr3p1;Parent=g3845.t1.1.5b6be70b NODE_2803_length_5085_cov_42.8285 . mRNA 186 1761 . + . ID=g3845.t1;Parent=g3845;Name=g3845.t1 NODE_2803_length_5085_cov_42.8285 . five_prime_UTR 186 247 . + . ID=g3845.t1.utr5p1;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . exon 186 1015 . + . ID=g3845.t1.exon1;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . CDS 248 1015 . + 0 ID=cds.g3845.t1;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . exon 1277 1305 . + . ID=g3845.t1.exon2;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . CDS 1277 1305 . + 0 ID=cds.g3845.t1;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . exon 1427 1761 . + . ID=g3845.t1.exon3;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . CDS 1427 1529 . + 1 ID=cds.g3845.t1;Parent=g3845.t1 NODE_2803_length_5085_cov_42.8285 . three_prime_UTR 1530 1761 . + . ID=g3845.t1.utr3p1;Parent=g3845.t1 #PROT g3845.t1.1.5b6be70b g3845 MLVISSLPRAVWQLYGAVTRATVHLPAMACRRMSTAQPNAVLVERTVDARGVVRLVLNDPSRRNALSLDMIRQLDGHLQAAAQDAKVRAVVISARGPAFSSGHNLRELTAECAADHARVFAACSDVMKRVQEIPIPVIAAVGDQLATAAGCQLVASCDIVVASRRAHFATPGVRIGLFCSTPAVALARAVPSKAALEMLLTGEAITADDALRCGLVSRVVDGDASAVDAAVERIVGLICDASRSVIALGKAGYYRQLCRIGDGEQSERRKRRKGGHRRLFAEAKAQVVQLNARLSAHHRGCCRNYRAGLTGSCETLNALIMPSSGRSPWTETKRERCAFKSVSSALYPRTPQ* #PROT g3845.t1 g3845 MLVISSLPRAVWQLYGAVTRATVHLPAMACRRMSTAQPNAVLVERTVDARGVVRLVLNDPSRRNALSLDMIRQLDGHLQAAAQDAKVRAVVISARGPAFSSGHNLRELTAECAADHARVFAACSDVMKRVQEIPIPVIAAVGDQLATAAGCQLVASCDIVVASRRAHFATPGVRIGLFCSTPAVALARAVPSKAALEMLLTGEAITADDALRCGLVSRVVDGDASAVDAAVERIVGLICDASRSVIALGKAGYYRQLAMPRDQAYSFAESVMVSNLSDVSDGKEGIDAFLQKRKPKWSN* # PASA_UPDATE: g3846.t1, single gene model update, valid-1, status:[pasa:asmbl_5050,status:3], valid-1 NODE_2803_length_5085_cov_42.8285 . gene 1818 3463 . - . ID=g3846;Name=g3846.t1 NODE_2803_length_5085_cov_42.8285 . mRNA 1818 3463 . - . ID=g3846.t1;Parent=g3846;Name=g3846.t1 NODE_2803_length_5085_cov_42.8285 . five_prime_UTR 3436 3463 . - . ID=g3846.t1.utr5p1;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . exon 2466 3463 . - . ID=g3846.t1.exon1;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . CDS 2466 3435 . - 0 ID=cds.g3846.t1;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . exon 2213 2343 . - . ID=g3846.t1.exon2;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . CDS 2213 2343 . - 2 ID=cds.g3846.t1;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . exon 1818 2019 . - . ID=g3846.t1.exon3;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . CDS 1939 2019 . - 0 ID=cds.g3846.t1;Parent=g3846.t1 NODE_2803_length_5085_cov_42.8285 . three_prime_UTR 1818 1938 . - . ID=g3846.t1.utr3p1;Parent=g3846.t1 #PROT g3846.t1 g3846 MARSRAVIKGGPLASLCLTAACLVLAVVCVANGAEAANRDYLVGGFNIQIFGSSKMAKPQVVSALLEILPLYDLLFIMEVRDTTNSSIVSLLSQLNAKTPAGQKYDMLLSERLGRTNSKEQYVYFYRTALFAPIMSQTYVFSAALNYFERPPYVATFQVLGSSSRFAMIGLHSKPDDSVNEISYLVDVYDAHVKQYGQTAALILGDMNADCGYVSKTNFQGLRLWTDARFKWHISSDNDTTVSNGSCAYDRLVTAGSLTANVVPWSTVIYRYDEVLNLSIDQAKEVSDHYNTWLKLRFVTTNTAPPPLGGDSNTAASSSSSSGGNTAAIAGGAAAGVAVAAAAVVGFVVWRRRTVGENRAMSSMMRSASTERLEDSFTMESNPVHSVGRAAHR* # PASA_UPDATE: g1748.t1, single gene model update, valid-1, status:[pasa:asmbl_3104,status:12], valid-1 NODE_1957_length_8356_cov_50.2895 . gene 3359 6689 . + . ID=g1748;Name=g1748.t1 NODE_1957_length_8356_cov_50.2895 . mRNA 3359 6689 . + . ID=g1748.t1;Parent=g1748;Name=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 3359 3442 . + . ID=g1748.t1.exon1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 3359 3442 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 3614 3724 . + . ID=g1748.t1.exon2;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 3614 3724 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 3860 3944 . + . ID=g1748.t1.exon3;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 3860 3944 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 4248 4375 . + . ID=g1748.t1.exon4;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 4248 4375 . + 2 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 4612 4718 . + . ID=g1748.t1.exon5;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 4612 4718 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 5006 5120 . + . ID=g1748.t1.exon6;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 5006 5120 . + 1 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 5537 5680 . + . ID=g1748.t1.exon7;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 5537 5680 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . exon 6239 6689 . + . ID=g1748.t1.exon8;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . CDS 6239 6538 . + 0 ID=cds.g1748.t1;Parent=g1748.t1 NODE_1957_length_8356_cov_50.2895 . three_prime_UTR 6539 6689 . + . ID=g1748.t1.utr3p1;Parent=g1748.t1 #PROT g1748.t1 g1748 MGDRKRAHEGGNRGGRKKLKHYHSFAKKGDRETTELGYNMKGILVSCNRDNEALCVREAYNLFNEYVDLFYPNSTFGKSIAPGYADADGDDSDAEGDAGESIAAALDRELKELRGDGAEGQPVQRPARRFQAAQTGVTGQVFIRVNDPEIDVETFVHDMLEDVLAKGKSKSRFCERIIPVTITCHADIAAITETLPRVIDRHFEPSNKQTFAVMYRARHNSSLEREEIIKSVAALIIIDGHKVDLNHPALCVVVEPLKNVCCLSVLKNYERLKRYNIRTLTETEEQKLAAKKAFHDKAKKSADGSAPRAARDNGADDGAIDVDETVVSVDAAAPLEEVVSTTAVLASAPSAEEQADE* # PASA_UPDATE: g1747.t1, single gene model update, valid-1, status:[pasa:asmbl_3101,status:3], valid-1 NODE_1957_length_8356_cov_50.2895 . gene 1670 2859 . - . ID=g1747;Name=g1747.t1 NODE_1957_length_8356_cov_50.2895 . mRNA 1670 2859 . - . ID=g1747.t1;Parent=g1747;Name=g1747.t1 NODE_1957_length_8356_cov_50.2895 . five_prime_UTR 2817 2859 . - . ID=g1747.t1.utr5p1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . exon 2640 2859 . - . ID=g1747.t1.exon1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . CDS 2640 2816 . - 0 ID=cds.g1747.t1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . exon 2396 2511 . - . ID=g1747.t1.exon2;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . CDS 2396 2511 . - 0 ID=cds.g1747.t1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . exon 2044 2285 . - . ID=g1747.t1.exon3;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . CDS 2044 2285 . - 1 ID=cds.g1747.t1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . exon 1670 1842 . - . ID=g1747.t1.exon4;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . CDS 1721 1842 . - 2 ID=cds.g1747.t1;Parent=g1747.t1 NODE_1957_length_8356_cov_50.2895 . three_prime_UTR 1670 1720 . - . ID=g1747.t1.utr3p1;Parent=g1747.t1 #PROT g1747.t1 g1747 MEGASFGHMQWAHSEVPVANGCHTATPAQYGHYSFGGMTAAHHGEACLDSVGGTYDDVQRKRRREAGDVGGGDLSHSSFQGRSEGPSPAINAAFGGHWTPNTVMISGTASCQNSRSSRRFVKVCAGAGVYVTDKFEPAGRDTTVYGASVGERLVNIKQYDQITFDAGTFCTDERRRPEGHFIHLWRYDTAARKLFVAQSFAFTDAAAYKQVRSAVEGM* # PASA_UPDATE: g1749.t1, single gene model update, valid-1, status:[pasa:asmbl_3102,status:12], valid-1 NODE_1957_length_8356_cov_50.2895 . gene 7404 8190 . - . ID=g1749;Name=g1749.t1 NODE_1957_length_8356_cov_50.2895 . mRNA 7404 8190 . - . ID=g1749.t1;Parent=g1749;Name=g1749.t1 NODE_1957_length_8356_cov_50.2895 . five_prime_UTR 8128 8190 . - . ID=g1749.t1.utr5p1;Parent=g1749.t1 NODE_1957_length_8356_cov_50.2895 . exon 8019 8190 . - . ID=g1749.t1.exon1;Parent=g1749.t1 NODE_1957_length_8356_cov_50.2895 . CDS 8019 8127 . - 0 ID=cds.g1749.t1;Parent=g1749.t1 NODE_1957_length_8356_cov_50.2895 . exon 7404 7599 . - . ID=g1749.t1.exon2;Parent=g1749.t1 NODE_1957_length_8356_cov_50.2895 . CDS 7409 7599 . - 2 ID=cds.g1749.t1;Parent=g1749.t1 NODE_1957_length_8356_cov_50.2895 . three_prime_UTR 7404 7408 . - . ID=g1749.t1.utr3p1;Parent=g1749.t1 #PROT g1749.t1 g1749 MQMTASLKQLADTLAGEVAVITSNYATVASEAEKLAAAALSLAGADASETTAIKSTTSRHVTAIYLEGGKASGELREAAQSALPVFVAIALDDVVKSDE* # PASA_UPDATE: g1746.t1, single gene model update, valid-1, status:[pasa:asmbl_3103,status:12], valid-1 NODE_1957_length_8356_cov_50.2895 . gene 2 1588 . + . ID=g1746;Name=g1746.t1 NODE_1957_length_8356_cov_50.2895 . mRNA 2 1588 . + . ID=g1746.t1;Parent=g1746;Name=g1746.t1 NODE_1957_length_8356_cov_50.2895 . exon 2 53 . + . ID=g1746.t1.exon1;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . CDS 2 53 . + 0 ID=cds.g1746.t1;Parent=g1746.t1;5_prime_partial=true NODE_1957_length_8356_cov_50.2895 . exon 315 472 . + . ID=g1746.t1.exon2;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . CDS 315 472 . + 2 ID=cds.g1746.t1;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . exon 762 1213 . + . ID=g1746.t1.exon3;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . CDS 762 1213 . + 0 ID=cds.g1746.t1;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . exon 1405 1588 . + . ID=g1746.t1.exon4;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . CDS 1405 1567 . + 1 ID=cds.g1746.t1;Parent=g1746.t1 NODE_1957_length_8356_cov_50.2895 . three_prime_UTR 1568 1588 . + . ID=g1746.t1.utr3p1;Parent=g1746.t1 #PROT g1746.t1 g1746 EYFYYPNRLPNDVVTSTDEGYRPGDPILSIVGPGQNIYFLEKEARLTSIVEKPKGVEVKKPAGRGFVWPKYFYDANGNLPREAIRILRFDVVSFEAVAAQPVAPDVSDRGDDDDFEDFDDDEYDDDDVYATSDGESDDSDSDSALSDSRPITPSARAPSAAGTVASAPSGISRSGKTMNRKRVTIVVKMTDTVARVKDKLQVVYLVPQSTMELYAGPVLLSNDRIVSESMNISSGQAPADTTAAKARVCLAMSVTNEPAVTGTSAPAEKAPKPT* # PASA_UPDATE: g8612.t1, single gene model update, valid-1, status:[pasa:asmbl_6016,status:12], valid-1 NODE_3400_length_3557_cov_36.2395 . gene 1607 3364 . + . ID=g8612;Name=g8612.t1 NODE_3400_length_3557_cov_36.2395 . mRNA 1607 3364 . + . ID=g8612.t1;Parent=g8612;Name=g8612.t1 NODE_3400_length_3557_cov_36.2395 . five_prime_UTR 1607 1896 . + . ID=g8612.t1.utr5p1;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . exon 1607 2220 . + . ID=g8612.t1.exon1;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . CDS 1897 2220 . + 0 ID=cds.g8612.t1;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . exon 2594 2726 . + . ID=g8612.t1.exon2;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . CDS 2594 2726 . + 0 ID=cds.g8612.t1;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . exon 2941 3065 . + . ID=g8612.t1.exon3;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . CDS 2941 3065 . + 2 ID=cds.g8612.t1;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . exon 3329 3364 . + . ID=g8612.t1.exon4;Parent=g8612.t1 NODE_3400_length_3557_cov_36.2395 . CDS 3329 3364 . + 0 ID=cds.g8612.t1;Parent=g8612.t1 #PROT g8612.t1 g8612 MASAIELATVSSRDASFDKSPPFGINVTCTRRKWYKVQRDELHTTWAEVVLHYKEKPIAWAVLVVLLVSFGGYVSALVVYSGSLTRNSAMFIDYNGNVTIYDTVTTAEAFADLSEYGYDLDNTFVPIMNLDLLFGKFEPGNTGASMAVIMNFYPPKNFMQSAFPPKMNVTFTMYVDSSFQTFEKGKPLVEYSALCECVFALLCMG* # ORIGINAL: g8611.t1 original gene structure, not modified by PASA NODE_3400_length_3557_cov_36.2395 AUGUSTUS gene 213 520 . + . ID=g8611;Name=g8611.t1 NODE_3400_length_3557_cov_36.2395 AUGUSTUS mRNA 213 520 . + . ID=g8611.t1;Parent=g8611;Name=g8611.t1 NODE_3400_length_3557_cov_36.2395 AUGUSTUS exon 213 275 . + . ID=g8611.t1.exon1;Parent=g8611.t1 NODE_3400_length_3557_cov_36.2395 AUGUSTUS CDS 213 275 . + 0 ID=cds.g8611.t1;Parent=g8611.t1 NODE_3400_length_3557_cov_36.2395 AUGUSTUS exon 455 520 . + . ID=g8611.t1.exon2;Parent=g8611.t1 NODE_3400_length_3557_cov_36.2395 AUGUSTUS CDS 455 520 . + 0 ID=cds.g8611.t1;Parent=g8611.t1 #PROT g8611.t1 g8611 ALAAYEKSLEIKVANDGDEDEVAGMRQGIEWLQHQVKLKESE* # PASA_UPDATE: g9554.t1, single gene model update, valid-1, status:[pasa:asmbl_7146,status:12], valid-1 NODE_4256_length_1924_cov_33.669 . gene 217 1775 . - . ID=g9554;Name=g9554.t1 NODE_4256_length_1924_cov_33.669 . mRNA 217 1775 . - . ID=g9554.t1;Parent=g9554;Name=g9554.t1 NODE_4256_length_1924_cov_33.669 . exon 1599 1775 . - . ID=g9554.t1.exon1;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . CDS 1599 1775 . - 0 ID=cds.g9554.t1;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . exon 1218 1317 . - . ID=g9554.t1.exon2;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . CDS 1218 1317 . - 0 ID=cds.g9554.t1;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . exon 857 1033 . - . ID=g9554.t1.exon3;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . CDS 857 1033 . - 2 ID=cds.g9554.t1;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . exon 684 763 . - . ID=g9554.t1.exon4;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . CDS 684 763 . - 2 ID=cds.g9554.t1;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . exon 217 307 . - . ID=g9554.t1.exon5;Parent=g9554.t1 NODE_4256_length_1924_cov_33.669 . CDS 217 307 . - 0 ID=cds.g9554.t1;Parent=g9554.t1;3_prime_partial=true #PROT g9554.t1 g9554 MLYLVDRVSPLVANPGRVVITSSRLYFQAFNNISAEPCEKFRFDAIRRIVRRRFMLRHRGAEVFLDGGACVYLNFSSTDVRDLFYDTLLAQPGVQVADEHPHNATLRWQYGRMSNFDYLLHLNSLADRSFNDLTQYPVFPWVITDYISTKLDLTNPKSYRDLSKPIGALNPQRLELFKDRYDEMPDPKFLYGTHYSTPGYVLYYLVRI # PASA_UPDATE: g6431.t1, single gene model update, valid-1, status:[pasa:asmbl_7255,status:12], valid-1 NODE_4362_length_1744_cov_29.9868 . gene 260 1549 . + . ID=g6431;Name=g6431.t1 NODE_4362_length_1744_cov_29.9868 . mRNA 260 1549 . + . ID=g6431.t1;Parent=g6431;Name=g6431.t1 NODE_4362_length_1744_cov_29.9868 . exon 260 407 . + . ID=g6431.t1.exon1;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . CDS 260 407 . + 0 ID=cds.g6431.t1;Parent=g6431.t1;5_prime_partial=true NODE_4362_length_1744_cov_29.9868 . exon 762 843 . + . ID=g6431.t1.exon2;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . CDS 762 843 . + 2 ID=cds.g6431.t1;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . exon 1032 1115 . + . ID=g6431.t1.exon3;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . CDS 1032 1115 . + 1 ID=cds.g6431.t1;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . exon 1391 1549 . + . ID=g6431.t1.exon4;Parent=g6431.t1 NODE_4362_length_1744_cov_29.9868 . CDS 1391 1549 . + 1 ID=cds.g6431.t1;Parent=g6431.t1;3_prime_partial=true #PROT g6431.t1 g6431 EDEFQLSLKPSERGLVLEEKSTDASGLREVKGGKFEALIERLTHPLTLGDPNFTDVFILTYHSFTTPIKLMEALIMRYGITWPAMMDDDQRRIFHQKIIIPVHLRIFNVLKAWMNKSFDDFLEDPKLMGMFDIFIETMGKELKQAADQLHKIMERNK # ORIGINAL: g8010.t1 original gene structure, not modified by PASA NODE_3579_length_3163_cov_39.3841 AUGUSTUS gene 91 638 . + . ID=g8010;Name=g8010.t1 NODE_3579_length_3163_cov_39.3841 AUGUSTUS mRNA 91 638 . + . ID=g8010.t1;Parent=g8010;Name=g8010.t1 NODE_3579_length_3163_cov_39.3841 AUGUSTUS exon 91 286 . + . ID=g8010.t1.exon1;Parent=g8010.t1 NODE_3579_length_3163_cov_39.3841 AUGUSTUS CDS 91 286 . + 0 ID=cds.g8010.t1;Parent=g8010.t1 NODE_3579_length_3163_cov_39.3841 AUGUSTUS exon 529 638 . + . ID=g8010.t1.exon2;Parent=g8010.t1 NODE_3579_length_3163_cov_39.3841 AUGUSTUS CDS 529 638 . + 2 ID=cds.g8010.t1;Parent=g8010.t1 #PROT g8010.t1 g8010 MRIVEGIFDVILQFHGAVSASENSEGRRRGKRAGDDRSGGLDDDVFGRLCQAQRSFREYAGFLYIVVKKLVAKGYQAEHLDDFILRLDFNGFYSRVALGRV* # PASA_UPDATE: g8011.t1, single gene model update, valid-1, status:[pasa:asmbl_6239,status:12], valid-1 NODE_3579_length_3163_cov_39.3841 . gene 1435 2733 . - . ID=g8011;Name=g8011.t1 NODE_3579_length_3163_cov_39.3841 . mRNA 1435 2733 . - . ID=g8011.t1;Parent=g8011;Name=g8011.t1 NODE_3579_length_3163_cov_39.3841 . five_prime_UTR 2733 2733 . - . ID=g8011.t1.utr5p1;Parent=g8011.t1 NODE_3579_length_3163_cov_39.3841 . exon 2617 2733 . - . ID=g8011.t1.exon1;Parent=g8011.t1 NODE_3579_length_3163_cov_39.3841 . CDS 2617 2732 . - 0 ID=cds.g8011.t1;Parent=g8011.t1;5_prime_partial=true NODE_3579_length_3163_cov_39.3841 . exon 1435 2452 . - . ID=g8011.t1.exon2;Parent=g8011.t1 NODE_3579_length_3163_cov_39.3841 . CDS 2020 2452 . - 1 ID=cds.g8011.t1;Parent=g8011.t1 NODE_3579_length_3163_cov_39.3841 . three_prime_UTR 1435 2019 . - . ID=g8011.t1.utr3p1;Parent=g8011.t1 #PROT g8011.t1 g8011 RGVNPTPVAKAKAPGPNGNAQSTPSKATGLRASKEADVSPTSPGVRAAAAAAAVYQEDDDDDVIVDASSKPARPLPANAKARKVTEAPSKRPPEPAQQQPPQALQQTPKKKGVPAGRGAGGGPSGGHAMSSGDSAGASVGGGGSGAGEEAVVQIVNARLRSEIQELNGEIEYYESLNRSFQN* # ORIGINAL: g3308.t1 original gene structure, not modified by PASA NODE_3743_length_2854_cov_44.9352 AUGUSTUS gene 32 834 . - . ID=g3308;Name=g3308.t1 NODE_3743_length_2854_cov_44.9352 AUGUSTUS mRNA 32 834 . - . ID=g3308.t1;Parent=g3308;Name=g3308.t1 NODE_3743_length_2854_cov_44.9352 AUGUSTUS exon 32 834 . - . ID=g3308.t1.exon1;Parent=g3308.t1 NODE_3743_length_2854_cov_44.9352 AUGUSTUS CDS 32 834 . - 0 ID=cds.g3308.t1;Parent=g3308.t1 #PROT g3308.t1 g3308 MREEISTRIAHLYFVASRMAAFFQPGLCFKTIFVADAHVHISAISEAQWAHIKGLAPQLLQAPPTMVSVDITDAERIITLAARIFVIEDAPSVALGQHAHDAIQPPLVTWGAYGAQGDTGSLPPTATQSPEAHGLTTVPFDDIPLTLTAAIMHGPYHHSIRQEPPSLTDEYAEMPTSHTAYPEGGLVYHDSEAHGDTQPEQHAHPSTHTIVSQLPISSGGVHCIFCESGDRPGKLFKDLSRHMFRHFDAFEAEGATGSHVLSIFHRV # ORIGINAL: g4678.t1 original gene structure, not modified by PASA NODE_4683_length_1335_cov_26.6714 AUGUSTUS gene 152 1095 . + . ID=g4678;Name=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS mRNA 152 1095 . + . ID=g4678.t1;Parent=g4678;Name=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS exon 152 221 . + . ID=g4678.t1.exon1;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS CDS 152 221 . + 0 ID=cds.g4678.t1;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS exon 426 566 . + . ID=g4678.t1.exon2;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS CDS 426 566 . + 2 ID=cds.g4678.t1;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS exon 790 854 . + . ID=g4678.t1.exon3;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS CDS 790 854 . + 2 ID=cds.g4678.t1;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS exon 1030 1095 . + . ID=g4678.t1.exon4;Parent=g4678.t1 NODE_4683_length_1335_cov_26.6714 AUGUSTUS CDS 1030 1095 . + 0 ID=cds.g4678.t1;Parent=g4678.t1 #PROT g4678.t1 g4678 CPSNFAGALCDKCAPGFGGPTCTECPKCNEQGGRCSEGIENDGKCACRTAGFTGSLCDSCAAGYYGVRCEPCPDCGPQGTCVDGYTGSGLCTCKTGFAGSRCDGNACAALLHS* # PASA_UPDATE: g1473.t1, single gene model update, valid-1, status:[pasa:asmbl_4941,status:12],[pasa:asmbl_4942,status:12], valid-1 NODE_2756_length_5212_cov_52.6547 . gene 209 4889 . - . ID=g1473;Name=g1473.t1 NODE_2756_length_5212_cov_52.6547 . mRNA 209 4889 . - . ID=g1473.t1;Parent=g1473;Name=g1473.t1 NODE_2756_length_5212_cov_52.6547 . five_prime_UTR 4724 4889 . - . ID=g1473.t1.utr5p1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 4498 4889 . - . ID=g1473.t1.exon1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 4498 4723 . - 0 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 4164 4362 . - . ID=g1473.t1.exon2;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 4164 4362 . - 2 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 3816 3911 . - . ID=g1473.t1.exon3;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 3816 3911 . - 1 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 3256 3333 . - . ID=g1473.t1.exon4;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 3256 3333 . - 1 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 2097 2949 . - . ID=g1473.t1.exon5;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 2097 2949 . - 1 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 1770 1882 . - . ID=g1473.t1.exon6;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 1770 1882 . - 0 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 934 1398 . - . ID=g1473.t1.exon7;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 934 1398 . - 1 ID=cds.g1473.t1;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . exon 209 587 . - . ID=g1473.t1.exon8;Parent=g1473.t1 NODE_2756_length_5212_cov_52.6547 . CDS 209 587 . - 1 ID=cds.g1473.t1;Parent=g1473.t1;3_prime_partial=true #PROT g1473.t1 g1473 MVCGLGSVAHDTIPFRMPSSTAASAWTMRGAVVCLVMTAVFVACLSGAAEGLHTTDGGEVLPLPGCTNDAVSNLMVDVGWGYRKPKGFDAEIVIETNGRESNEVVSYVCAYILKSMGFSNVTLVRRLSKSGDVSPSPEIVNRLATGMSHVYLEGHMDSYEIDVNHAIESFGPIGYIVLPGLYIPEYVDTRNSKTFTPNIEWFTDASKLKLFINSTAYPGGLTDSGWYYCGNEYNASYTGCVAGKFVPPWCRATNATLNPGARYPHALASCIDIWAYPAKENRSASLEALVTSLGLNATISYMTTDELRVRTAAAYKSGLAFVLFAYFPDPFALDYDVHRVAFPDPSNQHCQTTYDHSTSVGCDFVPEIYLKLGSVTLRSFAPDVPKLLTSLELKTSEIIEPLLWYAAGNTTAAAACLWVGRNQNTVRLFIPTGPGNSTDSVGYVGSSTISGRIVAVIVGVVVTVVVFAGVVIVLLSRTLLRKRMAYEKQSQRHRNIIPLEEIVFGEMVGNGSFGVVFKGTWRGTQVAIKVFKMRGAAGIPDHTMSVSATDISSASSRAHRPHLHSVPESAPIARVSVPHEQESTLSHELSEGGEPVDTSTLEGAVDVHGHRDKDVEEMVDEILVAAEEETSDRKSSESVVVSVTEVKEGNGVAAAPARRASGSAVAVPVPGPVADRSSVFRASLQLHRRDSHKRSSTTMSKQHAAPSAPHPPTHAHATTQGNWMAVEALFDNLRKATAPLARGTLASVTGLWRRAGRDGGSSSSIARSKSSTSVSPTSSSDSARARRVASIAWFKEAARKISE # ORIGINAL: g13474.t1 original gene structure, not modified by PASA NODE_5140_length_1003_cov_137.068 AUGUSTUS gene 2 1003 . + . ID=g13474;Name=g13474.t1 NODE_5140_length_1003_cov_137.068 AUGUSTUS mRNA 2 1003 . + . ID=g13474.t1;Parent=g13474;Name=g13474.t1 NODE_5140_length_1003_cov_137.068 AUGUSTUS exon 2 1003 . + . ID=g13474.t1.exon1;Parent=g13474.t1 NODE_5140_length_1003_cov_137.068 AUGUSTUS CDS 2 1003 . + 0 ID=cds.g13474.t1;Parent=g13474.t1 #PROT g13474.t1 g13474 VGFAVSDGDFISESVYSFVTISYVNDEPVLSLSAGAGPDFSVGYTEGDGAVVIVGADLLLIDVDSANMTLATVHLTDRPDGSSERLDCDLSSYPLTKSYSNGVLSIAGSAPLAAYEDVLTTVTYEHTDALPGNPTVVDRVVTFVIKDASDWSASVTSTIQFTAINDAPILDLNGATAGSDFTAVFTEEGVEVAIVSSSGLTLVDVDSATLSSATVTIGSTPDGGDESLSATTTGTSITASYSAGVLTLTGSASVAHYRTVLRTCKYGNTADEPTASDRSITFEVSDGAATSVVRTSTVSITLVNDAPALDLDTNVAGTGATATYVENGAGTSVV # ORIGINAL: g13690.t1 original gene structure, not modified by PASA NODE_3350_length_3672_cov_40.01 AUGUSTUS gene 836 2083 . + . ID=g13690;Name=g13690.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS mRNA 836 2083 . + . ID=g13690.t1;Parent=g13690;Name=g13690.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS exon 836 2083 . + . ID=g13690.t1.exon1;Parent=g13690.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS CDS 836 2083 . + 0 ID=cds.g13690.t1;Parent=g13690.t1 #PROT g13690.t1 g13690 MPVTTTEPGEIVDAASQKRQGSLIRKMIAAFGDQSGASGRLSEPTVSSVATKYSGGGCEGASKLQGPHAADKAPQVFSAGRCAHDSKDRIVEGASTSPKVMQSGGCVTVDYGDRGVNVGPYNHDQSADDLILAAEIGQVLLQRNEMLEKELEKERALRIAVECENETLQSKLKAMTEQQGRLIHMVRERDDELHASECSNARLEGECEDLQQQKNSAVLTKNLISRENAELEAQIASLTRRLRELEDDNKQLKRTTAIFDMLTSCRSSSDPPLHSQDESTNTDASDDSSALTCTRADSATQTCTFLVAPSTLSQPNGRREGIEMCTVDEFVRQELHVEGLVYARAPNPTETASMATPVRNDADRRGIGGPTTASNSKPPTVNMLSRYSRMGGLKHCEDSVGDPCCVLLLVIIELR* # ORIGINAL: g13691.t1 original gene structure, not modified by PASA NODE_3350_length_3672_cov_40.01 AUGUSTUS gene 2380 3601 . + . ID=g13691;Name=g13691.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS mRNA 2380 3601 . + . ID=g13691.t1;Parent=g13691;Name=g13691.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS exon 2380 3601 . + . ID=g13691.t1.exon1;Parent=g13691.t1 NODE_3350_length_3672_cov_40.01 AUGUSTUS CDS 2380 3601 . + 0 ID=cds.g13691.t1;Parent=g13691.t1 #PROT g13691.t1 g13691 MSRTSTAPAAAHALPTASTINATAVSTASESHAGISEARLLNPLLASSPSSTEDGKSGETPTPPPRPRRKQTPGCSPATLRKPTIPPRPDASACAMTHATTQNTDDTDNSTCNPPRPGSVQGAPKGKAQSELHSVTCSREAAEKELLGAEVAFIGLTFMGDDDVDEDPNTSAIHAERAAAMQRLDAAQRMYNAWKADHALRDGSTGTHGAFASEAQAAVDMTCLRSGGSSRQDNTFEESDPMEQACAIYEAIRYRSASKVAFGDAEMHAVSTFKRTSEGEERDAPRTGGSPGFYDDDLSVLTSLSGSSCGASVYFKDRVFVRDNHQQQQQQQESVSSRKGATAVHPTRDPLDDIAFKAARTLLFGVTGLKLTKWGTRKRFLFVNPMGATVTWGARRPTVEEGTPSKT # PASA_UPDATE: g4687.t1, single gene model update, valid-1, status:[pasa:asmbl_6726,status:12], valid-1 NODE_3919_length_2514_cov_30.0861 . gene 76 2387 . - . ID=g4687;Name=g4687.t1 NODE_3919_length_2514_cov_30.0861 . mRNA 76 2387 . - . ID=g4687.t1;Parent=g4687;Name=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 2287 2387 . - . ID=g4687.t1.exon1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 2287 2387 . - 0 ID=cds.g4687.t1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 1881 2007 . - . ID=g4687.t1.exon2;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 1881 2007 . - 1 ID=cds.g4687.t1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 1226 1290 . - . ID=g4687.t1.exon3;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 1226 1290 . - 0 ID=cds.g4687.t1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 846 926 . - . ID=g4687.t1.exon4;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 846 926 . - 1 ID=cds.g4687.t1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 451 615 . - . ID=g4687.t1.exon5;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 451 615 . - 1 ID=cds.g4687.t1;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . exon 76 200 . - . ID=g4687.t1.exon6;Parent=g4687.t1 NODE_3919_length_2514_cov_30.0861 . CDS 76 200 . - 1 ID=cds.g4687.t1;Parent=g4687.t1;3_prime_partial=true #PROT g4687.t1 g4687 MEGALAVYMTQSVREQRFLGVTRMWGETRNCTVLFIACRNVPTLEGLDALQKYVISTQQVAEQYDGVINKLLVDEKGTIILLVFGLPPKGTHADDAKRACYAAIGVKSALHEQQLGVSIGIATGKIFCGSYGKEDVRTEYAIIGSTVNLAARLMGAALKSAADASKSSGVSYTSDIICDTATRDASKVDIHFDEGAHLQLKGISKPTPTYKPIKRINRVPN # ORIGINAL: g5828.t1 original gene structure, not modified by PASA NODE_1565_length_10459_cov_41.1705 AUGUSTUS gene 2074 6623 . - . ID=g5828;Name=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS mRNA 2074 6623 . - . ID=g5828.t1;Parent=g5828;Name=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 6345 6623 . - . ID=g5828.t1.exon1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 6345 6623 . - 0 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 5366 6006 . - . ID=g5828.t1.exon2;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 5366 6006 . - 0 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 4882 4950 . - . ID=g5828.t1.exon3;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 4882 4950 . - 1 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 4325 4477 . - . ID=g5828.t1.exon4;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 4325 4477 . - 1 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 3785 3862 . - . ID=g5828.t1.exon5;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 3785 3862 . - 1 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 3263 3418 . - . ID=g5828.t1.exon6;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 3263 3418 . - 1 ID=cds.g5828.t1;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 2074 2344 . - . ID=g5828.t1.exon7;Parent=g5828.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 2074 2344 . - 1 ID=cds.g5828.t1;Parent=g5828.t1 #PROT g5828.t1 g5828 MLAFKPGDYRSSLNDIHPAVASDSSSGSAQAHVVHTFTNVSPMLLGVVSPPQVVARDMATLTYVLTHVAVSGSVIVIAGDCTWEEWAMPIAISLQGGVKVVGVRLPSGRLPVVELSFALSGALHLQDVAVRTSKHCIYAIGEEAKVALVGCELYGTSNSACVCAIAGASVTLTSTRITCPSAGGVLAADKGSVVIVRDCDITQCGLAREPGQRPCAAVEAREGGRCIVQQSRLTHCGKGGLVWNGAVGAVFVDCDISSHLSEGILARMATGLVVRNCRITDCAAFGISLDARVTDCRIEQCHISNNSSWGVFIKGKSSASINKCTISGNRAGGVYIGINFSAVVSLSNNVVTGSPIALKDLHAYGRGGLNSEGATMLRVIRGMHSFDANMAEPGCSYRPLLTKSDIIYIAPTLVDNVLENDDQTDWKTYQGDRKQTAEMTDACAMCGITRTRGTKHCGRAFNTDGKRFIVKVQNGEIGFDHRRRLHVYDCSRKLNGVFCNERVSQLIATDGILCANGLTSRKLFLWAIAEDDSHVRLYLRDFAPSQAW* # ORIGINAL: g5829.t1 original gene structure, not modified by PASA NODE_1565_length_10459_cov_41.1705 AUGUSTUS gene 8124 10248 . - . ID=g5829;Name=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS mRNA 8124 10248 . - . ID=g5829.t1;Parent=g5829;Name=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 9520 10248 . - . ID=g5829.t1.exon1;Parent=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 9520 10248 . - 0 ID=cds.g5829.t1;Parent=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 8863 9073 . - . ID=g5829.t1.exon2;Parent=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 8863 9073 . - 0 ID=cds.g5829.t1;Parent=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS exon 8124 8521 . - . ID=g5829.t1.exon3;Parent=g5829.t1 NODE_1565_length_10459_cov_41.1705 AUGUSTUS CDS 8124 8521 . - 2 ID=cds.g5829.t1;Parent=g5829.t1 #PROT g5829.t1 g5829 MSISPLRSLSVRLVADVAEAQTHNASETASTASFEVAGNVEQTFTGEGPAIRLSDLTAYGFPGTYRVRLKPGAFNMFYNESDPTDAPLFQSYMDVVLLPCSPEKLLLADARFGSVRYACFLPSCTPNCQRGECVSVGVGLGGNFTCKCDYGWIGRACDVPLMYTILSVGLGILFFVVMLSFVRYNGLFIAYFRRKYDDWRKKEDRSATLFLVKQLSSKITDAIGIVTDLYAFLELLSRPAERQHGVMAAYTTFFVIGTGLVLVSIVAVSARIRYMLSVAKFPERANEMRHMRRKLYVTGSILLVAFFKNIPFIVLNIFLTQMDSRECIPVSVSFSVSLTWSAFAVGMKMPNFGKFFRSLSRYFELIRDAPKTTKSKGKWSMFWKRLRNRMRCTTRNSTTATFAHNNDEDVANMSQNPLRVSIASSQSQEHITLQDRANITDSSDL* # ORIGINAL: g10189.t1 original gene structure, not modified by PASA NODE_436_length_23787_cov_41.6231 AUGUSTUS gene 2479 5025 . + . ID=g10189;Name=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS mRNA 2479 5025 . + . ID=g10189.t1;Parent=g10189;Name=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 2479 2505 . + . ID=g10189.t1.exon1;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 2479 2505 . + 0 ID=cds.g10189.t1;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 2691 2792 . + . ID=g10189.t1.exon2;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 2691 2792 . + 0 ID=cds.g10189.t1;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 2982 3351 . + . ID=g10189.t1.exon3;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 2982 3351 . + 0 ID=cds.g10189.t1;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 3566 5025 . + . ID=g10189.t1.exon4;Parent=g10189.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 3566 5025 . + 2 ID=cds.g10189.t1;Parent=g10189.t1 #PROT g10189.t1 g10189 MKSEFSAQQGGFPQRVTSPTRSGQLASADIYHRLDRDQIASNAVDYLLELAYPQEGNADPPELPSHGSRSAHLIDLFQFIFQKVAPDDVDQQDGDGHGMPLRVLIDTARDIFKLRGKDCNDVAKAVPVCDRLDRWAREFINDTSVSTVRRLDIYCLKVIHSGPSPRGRRLHVDRASLKRTCSITATADRPHNTAHVQQGTDNAETPPGVSALPVQTMAGENPTTPSAEAICPTTQNDGMEATGEGVGEVSGDTESGGDGCGDSTASGSDDDFDAGLDSMDDDLLADVSADSIQDLCLDVHNHSVNSISNNNGDNNGDNNNDDNNNNNHNNNNNYNSDSMPNDQDAFDSPTGIQFAASNARSTSHPGMHAGSAFDHVSANPDSNTPAGIRIVRRGRPFPEFGCSSPRIDHANAISSDDAADGRSKYTSQSATASIDTPEVEKWDESLREKADELRGGYKQANSGNECDGGGSNSHREVAMHENRALNTANLEPMLLDVPKTTPAIAHSEQEGKRQDVRQQSNFGAPSSKRKQQDDDDDDASETGVADSDTRAPVRRRLYSEPENTFDAISEAITMSLRFHDLMKDISARRVDEQNRLAGMDAEINQLRRDKENLEKSLASTTKECDELREKVKQMEDNIGAAMALFGRNGHML* # ORIGINAL: g10190.t1 original gene structure, not modified by PASA NODE_436_length_23787_cov_41.6231 AUGUSTUS gene 5869 13776 . - . ID=g10190;Name=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS mRNA 5869 13776 . - . ID=g10190.t1;Parent=g10190;Name=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 13641 13776 . - . ID=g10190.t1.exon1;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 13641 13776 . - 0 ID=cds.g10190.t1;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 13167 13438 . - . ID=g10190.t1.exon2;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 13167 13438 . - 2 ID=cds.g10190.t1;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 12592 12763 . - . ID=g10190.t1.exon3;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 12592 12763 . - 0 ID=cds.g10190.t1;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 11374 12443 . - . ID=g10190.t1.exon4;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 11374 12443 . - 2 ID=cds.g10190.t1;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 5869 11169 . - . ID=g10190.t1.exon5;Parent=g10190.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 5869 11169 . - 0 ID=cds.g10190.t1;Parent=g10190.t1 #PROT g10190.t1 g10190 MQRLSTAIGRPAVRRSGVSLDLVLVSLAIASLLNAHPSQAAGRRSENAYGGKVDLSCVSSVDLTGGQVHLPKGPGNTHMGCKTVEDDGTTLLTCGGRYIVDRPGEDDVLSLGFKLDKTVDAVNYIVARIESSGKASISFSSDENGDKVIGKTAVFFDGPASDSLSGGRYGSGIAATDSIVCKATLQPYYIKHKGCPIETIKPRPNKVLKCSPTDISTLNITDQTSDAFYMNWKSQETRTDSRYYVECDTSPGFDSGTKQVSSISIQPAAVYRSGEYLTVSSFGLRPASAVANTRDDYFVWWKTSSGDTGPLSGASKILVVDTSNITTAGEVCNAVVAALVKAGIATNITETVPSNVVRATCTGAGGGELNIEQLTSGAVPLEKRLHRGTVSRIISTSSVVAGTGSVGNTVPEYATLAVTGTSVTKGASTGGANITNGSPTGLPSNGNWYIGNAKKRAWEYFYIYNNGGCVDRAVVSSANATGRRVDVSGLTTKLDIANAIATVANSIDGLSATVTNDIPTLQTYTIQASARSRLLDGSQFFLVDETGKIWTWFFDKSGTRTSPLTAPSSPSGAITRIDISNPTYRTTANELAVTIRDAINAVPGVPFNASITVPFKTPTVSVTQNAPSSPPIRGRVTITMADSATLGQSIGGIIPLTSVDNQYFRICLESEGKLDTGSAIGLCTKDVTAVRATIEIEIVAGATKEKNALALTTALNTPANYPGSIVPFVVEQGIGSNADKVFVWQRSAGVNPTRVVVTISADQPNATPDGMSFILASQDGSFVAQFCYEKTTGTCGAETIKVTRDDSYIRVRAISSGSDPIVTVDVGHGLVNDSLVVFIETNDSGGGTSSKLAQRGFRVVSKSVNQFKLVSHASVTTTSAGTNGRVYKAADASVRVSDATADTNADGTFTKTGHGLANDDVVFFTGEASSVTKFAGGKLCQVASVNSVAGTFKCAGTMSTASETGIAFYKVADDSTKIAVASVSVGANPTITTIASHQLNVGDIIIYPFPRNAMSQLVDGGVWQHKFFRVVSVPSSTTLTVTPSITTTTTAAGYIFRGVSESKTNVAHGFKRLMDAHAVFPLHFETYIHDVTSFDKLRVIHRKNGTVPSLYQHKITDQDLKNAPSGMRIVLFDVANNNRKIDICIEHTIIGSGGQCEPSTDPSKTVVEAQLALRLSSVSAGSNPTVTMIRSAHGLLNDRLITFFAVDGGGATLNQRGFKVTGLSDKSMSLLPQISTSGSATKGIIYDIDASRKIAANATANADTTFTGPNDPSGVTGNDDVIYIPGSATAGTSFNSGVVCVVGLYDAHNTSADTWTCNSPRAASGTNIGIDYYVISTSSKKKTVSTIGTGTSPLITFASAHGLVPGQLVVVEVMAGLLIGEVALFKNKIFRVLAVPTTTTVTLDPRLSSTLATAGGSGFLWPINTKEPPTSWIVESLGSAISNPTNYPGGIAPFYVGAMTSNYRFVQQKTFGAPVGRPVFSVTVDTVANTNDGAILKFYLQDNSAVTVCFSKASGCPAPSAKLVVVDLAGGDTIAEVSMRFSKALRDASIPGIDDVTAVSGGSSSVSIYLLSGPSPTKSPELFGNGGTTALCGAWSVTAITTSYASVIGTYEVAGRYTAPVSWNVDAVSNPTYIHTATQSPAWAVVYGDDSAVTHMSAATKGTAAVSQGAINPGDVMSVTASTAYGVGNSIVNITNTVSLNLDPDPTKGTTLSSITFTGFSGYTLDKQRLTLPTKANILHGQALTFWSLLGGLKKYAVQFTPLPADTFTLTPATIEASIDVRDGPNATTIASRLVNALDPLPGISASIGQQRIQVTCDNAALTTHALNFNLFGAATNQQFVVWMDKGGAAFVPPPGSIGVKVTLGDAVTATDVANTLVAAVNANPTFANAFRTARRGVDGVQFTQVVGGDVVGRARIVLTVDRADYDGSAAIGSNLIHLFSLSTEYVMCLKQLTADCPISTSATRVNIDCTNGTACDSAAKVAVLVQTAVNSFESVFSTVIVSTKLYITVNANGASTPSYVEWSSGSWGALNLVDVGQMPRTTSGGESNGGNSNQEGIFVGPTESISSWRYQQIRKGAPAVYVEQDVTQASASDAVTVGNAASVSVEASTYAGAAGFRLFGDGTTGRDNVSTPYVSDGRTVSNMFGVLEGFPASLASTSLNCRLWASSIDTSVQNGYGKPCNLGGAVSGTLRAASSPTSAPLKMYPPTVTFVASDQALVTWTVPESKGNTAANFTHGATTEVQYMRCDACVGGCEGAITCPETDGICPTAATSQWSTGVTLTNLKGDEAYYVFRVRTKYSTSDWGVLSDTAYARRL* # PASA_UPDATE: g10188.t1, single gene model update, valid-1, status:[pasa:asmbl_7256,status:3], valid-1 NODE_436_length_23787_cov_41.6231 . gene 131 1575 . - . ID=g10188;Name=g10188.t1 NODE_436_length_23787_cov_41.6231 . mRNA 131 1575 . - . ID=g10188.t1;Parent=g10188;Name=g10188.t1 NODE_436_length_23787_cov_41.6231 . five_prime_UTR 1499 1575 . - . ID=g10188.t1.utr5p1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . exon 1486 1575 . - . ID=g10188.t1.exon1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . CDS 1486 1498 . - 0 ID=cds.g10188.t1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . exon 1072 1250 . - . ID=g10188.t1.exon2;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . CDS 1072 1250 . - 2 ID=cds.g10188.t1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . exon 680 845 . - . ID=g10188.t1.exon3;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . CDS 705 845 . - 0 ID=cds.g10188.t1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . exon 131 259 . - . ID=g10188.t1.exon4;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . three_prime_UTR 680 704 . - . ID=g10188.t1.utr3p1;Parent=g10188.t1 NODE_436_length_23787_cov_41.6231 . three_prime_UTR 131 259 . - . ID=g10188.t1.utr3p2;Parent=g10188.t1 #PROT g10188.t1 g10188 MAAKIRGMLSAEDLQQKVASGEIETVVVAFTDHYGRLVGKRFDAEFFIEAPRSAACNYLITVDMEMNPVRGYSFANWEKGYGDFVCVADMRSLRLASWLEKSALVLQCRL* # ORIGINAL: g10191.t1 original gene structure, not modified by PASA NODE_436_length_23787_cov_41.6231 AUGUSTUS gene 15678 23123 . - . ID=g10191;Name=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS mRNA 15678 23123 . - . ID=g10191.t1;Parent=g10191;Name=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 22786 23123 . - . ID=g10191.t1.exon1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 22786 23123 . - 0 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 21789 22513 . - . ID=g10191.t1.exon2;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 21789 22513 . - 1 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 18532 21590 . - . ID=g10191.t1.exon3;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 18532 21590 . - 2 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 17936 18225 . - . ID=g10191.t1.exon4;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 17936 18225 . - 0 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 17628 17688 . - . ID=g10191.t1.exon5;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 17628 17688 . - 1 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 17243 17332 . - . ID=g10191.t1.exon6;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 17243 17332 . - 0 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 16939 17013 . - . ID=g10191.t1.exon7;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 16939 17013 . - 0 ID=cds.g10191.t1;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS exon 15678 16727 . - . ID=g10191.t1.exon8;Parent=g10191.t1 NODE_436_length_23787_cov_41.6231 AUGUSTUS CDS 15678 16727 . - 0 ID=cds.g10191.t1;Parent=g10191.t1 #PROT g10191.t1 g10191 MTLMNMSSRHSTKLFHPAGIFSRTNVFVSVVALVTYVCVLGVSGAHGQLTDSNILPNNCPGWVVGFWFQQNNITGQPTAASGLASLIFGCSFVVYSTMPGIDRSDTDNTYTDRTASCTPGATPSTFNMTMNMDDGTLRVFGRAIAHHDSIVTLVDAELRFESPRKSFKVRTAFERAPEYTRVEADMQSMLCNYTNTTGTINLHIPPGRYLLASPLIIETSIDVRPTTTLGSVTLECVSLMHGWSVGLYMSTGSGSANPVSTIEGIAFEGCLIAGIYGTGEWVSVSVRRCSFTNCSRPGESGVSSGAISLSLEATVASSLVVAESLFHMNNRRSVVVFGDVNGLSRILLTSCIFEEPKRGFGSAVVAMQANVTILNCTFLNILGKDSGGGVYAVSQSAASIRIDHSTFRNCLTVGTLERYAIDAVGGTVYLGGVVSAYVFASNFDNCSSLYGGAILVVDKARLVTDVTSFDNCNSLRGGGAIHAVNFGAPFPQIDVRGNSFFENCVSLTGNGGAISLPQAASAVIDSAFFSRCNAVNGGAIFAEVDQLGDATLIIENTIFITCEAKAFGGAVFVTAASDVESAEASERISRLLMSAYAPDLKSAMPTIRLTAFYGCMATFGGGVHAGGAARLNITECTLSNNTADFGAGAYFSDSAEVRLHNVVWALNDAGNGGAFAMGVAAHVQAGEQIIVGCQAYEDGGAVYVSSRATLNASNFAFLYNFAEGSGGCLATANKAVAYVSNFTAVANFARQSGGCFNAQTSSRLDVSDGLAQYMCTAGDGGVFWYSGNAQGIVTRVSFAMNQASNGGVMWAGVMPTVFFHHCMFSNNTAEQLGGVWILSGASTVVGNGLTFYNNTAGASGGAIFVADTSQVTLRNSNIAHNSARSGGGGGISASSYDAVAGSLACVRTVGDAYNISLAILASQDVGKDDLDFFISKLDFLIRSEMGRYPIALISLHGCLVVNNSAMLGGGVQMVSAAFLAENTTIAYNRAQNGGGLFSTPIVYPSNYSGERWAALNGTFDILDNEASARGGGAFLMLSFEPFSGSVAENLTFVNVIGNGAKIGGGIFLYSSNITRQIATVLDETFDIEDNRASVSGPQFASGLVSLALGIATPMPPRVYLSYRFPTIYVTPQDAFLQPWYGFGQVTALLQRRAANGTWMDASQYLTGGVMQLLSDMLDVGRPPYLSFDSLILSNDFNERAFMRIIFRCNVAPYGFDTPDAQTELTKEMPPVIFSNTTSRALRSLRGINDYLDAIEFQTESCSRVVIDNECVSDSSNSGLTSGEYAAAAVPPFICGLALALVGVWLHLRRRRLRKSHETHVQFVEKNIRGRTELETLLIPRGDLEIADQIGSGEFGIVFRANALINNQWRVCAAKTLKEGSTDTQRVEFLGEAEIMRTVSHKNVMQLLGLCTDGEPMSILLEYAGLGSLKAFVSAIAPARQRQRSTQSQLVDFAAQICQGMEYLAECRIVHRDLAARNCLLQSSAEGLIVVKVSDFGLSRNMTTDGSYYRKKKNRALPIKWMAPEAITKHTFSAASDVWSFGILLWELFSFGMNPYPGTPSALIMDRLRQGYRMPRPDTCPEDIAEIMGNCWHDDPPQRPSWSILSEAFRAMAQLGPLGRPSLPMPPSKQSTQWHEAGLTLLATAVSEFNAIISTTTSNRSSDLREVSRGGRRDSLTAASTGGVEMRAVLGNPACGLASGSYLSLESGKGQTGLDTAASGGNLSNVSNIYASDPVLPPKRPIPIIVAQRASSETDGDDGDATRLKATSSTLSLSRTHSVDSSGRASAGSNGTMDSSGLRFRGSVGNGSTTSTGVVSHAPDHQVSPRTDQGTDGQPSGEDQCDLAQNSKRGSLQGTAEGRESGGGMQTHSVDPPRDVDGPSDSFVVDFGSTPRTSDV* # PASA_UPDATE: g9092.t1, single gene model update, valid-1, status:[pasa:asmbl_7075,status:12], valid-1 NODE_4188_length_2047_cov_38.1237 . gene 80 1873 . + . ID=g9092;Name=g9092.t1 NODE_4188_length_2047_cov_38.1237 . mRNA 80 1873 . + . ID=g9092.t1;Parent=g9092;Name=g9092.t1 NODE_4188_length_2047_cov_38.1237 . five_prime_UTR 80 80 . + . ID=g9092.t1.utr5p1;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . exon 80 137 . + . ID=g9092.t1.exon1;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . CDS 81 137 . + 0 ID=cds.g9092.t1;Parent=g9092.t1;5_prime_partial=true NODE_4188_length_2047_cov_38.1237 . exon 820 918 . + . ID=g9092.t1.exon2;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . CDS 820 918 . + 0 ID=cds.g9092.t1;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . exon 1052 1231 . + . ID=g9092.t1.exon3;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . CDS 1052 1231 . + 0 ID=cds.g9092.t1;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . exon 1421 1537 . + . ID=g9092.t1.exon4;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . CDS 1421 1537 . + 0 ID=cds.g9092.t1;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . exon 1772 1873 . + . ID=g9092.t1.exon5;Parent=g9092.t1 NODE_4188_length_2047_cov_38.1237 . CDS 1772 1873 . + 0 ID=cds.g9092.t1;Parent=g9092.t1 #PROT g9092.t1 g9092 GKLNRNRGMTIDVTPPPSLIPKGSKSNLWEYDPEEIARQMTLIDFKKFQAIKPNELLGQAWNKEKDHYKAPNVMALIKRINFVGNWVATNILTQSEVKGRAKRFSDFVQIATHLYSLNNFSTLMSILGGLNDASILRLKHTKKEVDKKILKKLEELEKVMTPEGNYRNFRETIHTVNPPCIPYL* # ORIGINAL: g3416.t1 original gene structure, not modified by PASA NODE_1144_length_13588_cov_41.1108 AUGUSTUS gene 7726 8504 . + . ID=g3416;Name=g3416.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS mRNA 7726 8504 . + . ID=g3416.t1;Parent=g3416;Name=g3416.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS exon 7726 7932 . + . ID=g3416.t1.exon1;Parent=g3416.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS CDS 7726 7932 . + 0 ID=cds.g3416.t1;Parent=g3416.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS exon 8103 8504 . + . ID=g3416.t1.exon2;Parent=g3416.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS CDS 8103 8504 . + 0 ID=cds.g3416.t1;Parent=g3416.t1 #PROT g3416.t1 g3416 MDERGRHPGLSASSSGPTNTAAIAASRNNWVKLNIGGKVFCTTKTTLCRDASSFLARLCCEDHGLGSTKDENGAFLIDRDPRYFGPVLNYLRHGKIVIDDGMCDEGVLEEAEFYGVVALADFLRQRIHARLKSTTAQATPMKHVYRVFESNEKELTQMMSTLSDGWRFEQLVSIPTPYAQDEEDSNQFIVVVSKEVPDTHVV* # PASA_UPDATE: g3414.t1, single gene model update, valid-1, status:[pasa:asmbl_544,status:12], valid-1 NODE_1144_length_13588_cov_41.1108 . gene 100 5507 . + . ID=g3414;Name=g3414.t1 NODE_1144_length_13588_cov_41.1108 . mRNA 100 5507 . + . ID=g3414.t1;Parent=g3414;Name=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 100 415 . + . ID=g3414.t1.exon1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 100 415 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 703 1011 . + . ID=g3414.t1.exon2;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 703 1011 . + 2 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 1155 1315 . + . ID=g3414.t1.exon3;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 1155 1315 . + 2 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 1521 1741 . + . ID=g3414.t1.exon4;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 1521 1741 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 2256 2334 . + . ID=g3414.t1.exon5;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 2256 2334 . + 1 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 2661 2861 . + . ID=g3414.t1.exon6;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 2661 2861 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 3100 3186 . + . ID=g3414.t1.exon7;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 3100 3186 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 3354 3539 . + . ID=g3414.t1.exon8;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 3354 3539 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 3797 3877 . + . ID=g3414.t1.exon9;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 3797 3877 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 4235 4357 . + . ID=g3414.t1.exon10;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 4235 4357 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 4669 5101 . + . ID=g3414.t1.exon11;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 4669 5101 . + 0 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . exon 5396 5507 . + . ID=g3414.t1.exon12;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . CDS 5396 5463 . + 2 ID=cds.g3414.t1;Parent=g3414.t1 NODE_1144_length_13588_cov_41.1108 . three_prime_UTR 5464 5507 . + . ID=g3414.t1.utr3p1;Parent=g3414.t1 #PROT g3414.t1 g3414 MPRIWIDYCQFMVRQQYVTRARHLFDRALRSLPITQHGRIWPLYLKFVRAHNISETAVRVYRRYVKLDPTDVEQYIDYLVEADRLDEAAVRLAGIVNRDDFASKKGKTKHELWVGLCELISRHPDKVTSLNSDAIIRGGLRRFTDMLGQLWTSLADLYVRRGLFEKARDVYEEAIATVLTVRDFSQVFDAYAQFEESLIQARMQEETDDPDAEIDLELRMARFEALMDRRPLLLSSVLLRQNPHNVPEWLKRAELYKNIPEKVVLTYTEAVQTVDPMKATGKVHDLWIAFAKFYEANEQLREARMVFDRATKASFRGVDDLAQVWCEYAEMEIRNNDFGRALQLMQQATHIPGGTKTNVNDQSQTVQRRLHKSLKLWSFYVDLEESVGTFEGAKAVYNRILDLRIASPQTIMNFANFLEEHKYFEDAFKAYERGVSLFKWPVVYDIWNAYLSKFIERYGGKKLERARDLFEQALEGCPAKYARTLYLLYAKLEEEHGLGRHAMAVLDRATKAVLPEERFDLFNVYIRRASEIFGVTHSRSIYERAIEVLPDREALQMCMRYADLERKLGEIDRARAVFSHGAQLADPRVENHYWKTWQEFEVRHGNEETFRELLRIKRSVQAQANTQVNVMAASMFTPASTQAASLAAGGGAAANPMAQLESALGAQGGNASGAGVAGGGKAMLFVRAAPKGFDETGAAPQNPDEIEIGMDEDDSEGSGEDGDAAAEEPGAKMQVEEQAVPSAVFGSLKASMDQ* # PASA_UPDATE: g3415.t1, single gene model update, valid-1, status:[pasa:asmbl_543,status:12], valid-1 NODE_1144_length_13588_cov_41.1108 . gene 5917 7280 . - . ID=g3415;Name=g3415.t1 NODE_1144_length_13588_cov_41.1108 . mRNA 5917 7280 . - . ID=g3415.t1;Parent=g3415;Name=g3415.t1 NODE_1144_length_13588_cov_41.1108 . five_prime_UTR 7242 7280 . - . ID=g3415.t1.utr5p1;Parent=g3415.t1 NODE_1144_length_13588_cov_41.1108 . five_prime_UTR 6709 6711 . - . ID=g3415.t1.utr5p2;Parent=g3415.t1 NODE_1144_length_13588_cov_41.1108 . exon 7242 7280 . - . ID=g3415.t1.exon1;Parent=g3415.t1 NODE_1144_length_13588_cov_41.1108 . exon 5917 6711 . - . ID=g3415.t1.exon2;Parent=g3415.t1 NODE_1144_length_13588_cov_41.1108 . CDS 6220 6708 . - 0 ID=cds.g3415.t1;Parent=g3415.t1 NODE_1144_length_13588_cov_41.1108 . three_prime_UTR 5917 6219 . - . ID=g3415.t1.utr3p1;Parent=g3415.t1 #PROT g3415.t1 g3415 MTNSHGYRSGTRYMFARRFGKHGPEHLSTYLKVYRVGDMVDVKGNGAVQRGMPHKFYHGRTGTVFNVTPRAVGVELNKRIGNRIIKKRINVRVEHIKHSTCRDDFLRRVKENEARKKEAKAKGVKISTKRPIMGLPRGGHHVSTAGNVPELVVPIEFDPQLI* # ORIGINAL: g3417.t1 original gene structure, not modified by PASA NODE_1144_length_13588_cov_41.1108 AUGUSTUS gene 11102 13588 . + . ID=g3417;Name=g3417.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS mRNA 11102 13588 . + . ID=g3417.t1;Parent=g3417;Name=g3417.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS exon 11102 11156 . + . ID=g3417.t1.exon1;Parent=g3417.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS CDS 11102 11156 . + 0 ID=cds.g3417.t1;Parent=g3417.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS exon 11421 13588 . + . ID=g3417.t1.exon2;Parent=g3417.t1 NODE_1144_length_13588_cov_41.1108 AUGUSTUS CDS 11421 13588 . + 2 ID=cds.g3417.t1;Parent=g3417.t1 #PROT g3417.t1 g3417 MKAALHVALLATTTICLSMFASAADPACGTTGTCPSAAVPNGCIAVNPSSATDDTVDLTVTSCMKFGSGTYIYKYVNVLDGGIVWFEDDGGVIDFKISSMLVEMGGRVVAGQWCKPFGCGGGKLNVWLWGDDPTKEGSVPGNNLAISCKTAGGCWPAGAPQGKFCCNRAESASPCSGPDSCASSGQNYAFEGYGSMPFDGAGNMFGFKVLAVAYGGSLELFGRKGVRPSYYVDPSTRIRECEIPASATSSDGWAQLSGYSWTRLNGTAKAGSKSIVLDRVVDWKKDDQIVLSTTDWHPSHIELAVVAADVTSSTVQLVDVLQYDHFGDIVPVDADLAKQSQNPNTEIDTRGAVGLLTRSITIRSLGVTATTPFPESKDCTATSPNNPACYFGGHTIVRQGFAKYQVQGVEFHQLGQGGRLGHYSAHFHLAKSTNYTRAFISDSSSWESMTRLFVVHGTHDVGIERNVGYLSVGHAYYLEDASEINNRLCHNLAVGIRAPLMTYLKAQNPQSPTARKVPGIIERLYGSDVGSIQGSDDYQPVAFWMMNMYNDIVGNMVSGVHGYGACYWMLGSELSSDSKLYLSWSSKTGTEQDYAQWHRIPGRLSPVKRFRGNVCSTAYLGLQTSMDIFPKMDTDAGFGKGSRDSVPHPPAYVLSAQQMPIVTQNFQATRVAHDNIYFINDGPTCAKASLYRSPPFPGSDDHYRNDVLCSCAVIDRFITSFNMAELNFGSVWLRVREKMWP # PASA_UPDATE: g1453.t1, single gene model update, valid-1, status:[pasa:asmbl_6671,status:3], valid-1 NODE_3877_length_2579_cov_35.4062 . gene 279 2544 . + . ID=g1453;Name=g1453.t1 NODE_3877_length_2579_cov_35.4062 . mRNA 279 2544 . + . ID=g1453.t1;Parent=g1453;Name=g1453.t1 NODE_3877_length_2579_cov_35.4062 . five_prime_UTR 279 349 . + . ID=g1453.t1.utr5p1;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . exon 279 733 . + . ID=g1453.t1.exon1;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . CDS 350 733 . + 0 ID=cds.g1453.t1;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . exon 992 1804 . + . ID=g1453.t1.exon2;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . CDS 992 1804 . + 0 ID=cds.g1453.t1;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . exon 2052 2544 . + . ID=g1453.t1.exon3;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . CDS 2052 2414 . + 0 ID=cds.g1453.t1;Parent=g1453.t1 NODE_3877_length_2579_cov_35.4062 . three_prime_UTR 2415 2544 . + . ID=g1453.t1.utr3p1;Parent=g1453.t1 #PROT g1453.t1 g1453 MDGRVVYVPSPNQDATYDFFTFCASDVVPPLSNPDATCVTKSSGNVTFTIKRVKDVPQTGGFKLDLDGVDDGAYLNATRAVDGTPFVYGNGTVSFWLTPRAVTPLPQPLNYRNIFSLFTSGGVEAIGVGALYPNTGAGPTINIIGSTGLAGVGAMTLPLDTNAHIAVSLVRTVSASVVATIFVNGRVDFNLTVLPAGQSSFTAAHVAIGDPSRSGVAYLESVTVSGRTPFAGGIDEFALWPFAMRDNDVVALRGKSAATLFSTLTETSRSVRSAVTPTPPWWWPHAYYTFDEGGGGRVTDFAAYQWTLSGQMLPLSDTAGAALVSSSLRGTLGGVRPPNAAGSTFINWPSRKASGAPENGRVLLVEDESAVFSLSAVHPDGAGVTIFISQYPSHGTLYQVSPNGVISGAVAQQTSFEAEKEIAQWASEASASSEWGTYLDTANCWCARGMLGPADCRCVLYVQHASLYCMRHCAACATSCGACGNLFICGPFESAYIYAHTRTLRTHITSANDDAHALT* # PASA_UPDATE: g3291.t1, single gene model update, valid-1, status:[pasa:asmbl_8868,status:3], valid-1 NODE_684_length_19109_cov_42.0061 . gene 4998 11128 . - . ID=g3291;Name=g3291.t1 NODE_684_length_19109_cov_42.0061 . mRNA 4998 11128 . - . ID=g3291.t1;Parent=g3291;Name=g3291.t1 NODE_684_length_19109_cov_42.0061 . five_prime_UTR 11003 11128 . - . ID=g3291.t1.utr5p1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 10980 11128 . - . ID=g3291.t1.exon1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 10980 11002 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 10690 10819 . - . ID=g3291.t1.exon2;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 10690 10819 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 10411 10510 . - . ID=g3291.t1.exon3;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 10411 10510 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 10095 10179 . - . ID=g3291.t1.exon4;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 10095 10179 . - 2 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 9760 9871 . - . ID=g3291.t1.exon5;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 9760 9871 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 9422 9524 . - . ID=g3291.t1.exon6;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 9422 9524 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 9215 9302 . - . ID=g3291.t1.exon7;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 9215 9302 . - 2 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 8864 8984 . - . ID=g3291.t1.exon8;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 8864 8984 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 8434 8579 . - . ID=g3291.t1.exon9;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 8434 8579 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 8165 8237 . - . ID=g3291.t1.exon10;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 8165 8237 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 7705 7929 . - . ID=g3291.t1.exon11;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 7705 7929 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 7462 7557 . - . ID=g3291.t1.exon12;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 7462 7557 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 7188 7250 . - . ID=g3291.t1.exon13;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 7188 7250 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 6659 6767 . - . ID=g3291.t1.exon14;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 6659 6767 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 6250 6457 . - . ID=g3291.t1.exon15;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 6250 6457 . - 2 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 5872 5983 . - . ID=g3291.t1.exon16;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 5872 5983 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 5524 5657 . - . ID=g3291.t1.exon17;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 5524 5657 . - 0 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . exon 4998 5271 . - . ID=g3291.t1.exon18;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . CDS 5169 5271 . - 1 ID=cds.g3291.t1;Parent=g3291.t1 NODE_684_length_19109_cov_42.0061 . three_prime_UTR 4998 5168 . - . ID=g3291.t1.utr3p1;Parent=g3291.t1 #PROT g3291.t1 g3291 MATKTSASSVALAEGIAERKLQIEMKLRSDEQNIEFLRETLERSGRTTRTMLDVLSSFEERLLTLEASIRPIHLDTLSLTRAQENIVSTVKGIDNVLTYYDVHNEAKSTVEKGVQANLSDYIDSMEHISKALQYFQRAAPVGADKTIAKLKGLFDQGVTNLEEEFKNILLTNNKPANVPALLLLESGSELPLAMPEAVIERLAIVAAWLCKVNKTANFTQLFAENRGRIMADSLQIVHSLPGPMLTATPALQKVAAGHKRTGSSVADSARKSAQQMLSATHKRTGSRVTLTVPRSGREDSVEGQSATYEKGSTTYLATVRAFLRMLQVDRALAFAVIPAAAFDSTFGALIQRPMQVFLGGGEAVINNSKRHSQKREFLAAFEVFDVLETLRSVITEFVSVLLIADRSVNPVAEMFQQMKTVAMRVLDEYEDEIKNDSVKQSKLSMDGTVNALTSNTLNFVTRLLDYQDTIEAVLVKGHLAAGSHQNLSAYICRLVASLARNLELKAQSYDSAPLGALFLLNNMHYILKTAKKANLIPLLDKDFEQKYAEIVSKRRKDYSQCWRKATQHLLEVNRVQSTPSKPGKVSKSERAAIKEKFKGFNKEFDEVFTAQKAYSIPDAELRAEVKKENAELIVPLYSKFLERYSSVPFTKNLSKYLKYPPNTIEQMLNSFFDTSA* # PASA_UPDATE: g3293.t1, single gene model update, valid-1, status:[pasa:asmbl_8867,status:12], valid-1 NODE_684_length_19109_cov_42.0061 . gene 15263 18967 . - . ID=g3293;Name=g3293.t1 NODE_684_length_19109_cov_42.0061 . mRNA 15263 18967 . - . ID=g3293.t1;Parent=g3293;Name=g3293.t1 NODE_684_length_19109_cov_42.0061 . exon 15263 18967 . - . ID=g3293.t1.exon1;Parent=g3293.t1 NODE_684_length_19109_cov_42.0061 . CDS 15515 18967 . - 0 ID=cds.g3293.t1;Parent=g3293.t1 NODE_684_length_19109_cov_42.0061 . three_prime_UTR 15263 15514 . - . ID=g3293.t1.utr3p1;Parent=g3293.t1 #PROT g3293.t1 g3293 MAGQPGFNNGAGRVITLFGALEADVSIAVAPSSGATKFPIISPFSHDVTILNTGSNDVAVVVTVTVDKNWWPAGLAFPAWSGFSACTGAVPTFQCASSTNIVAGVPKVVSFSVPTQSDTTIPPKFASVSISVSIALANPKLNVDRNLANNAASVTTPVVSQATLDVRFSNANQMNPYLVSDPSASKIPFGQSLLELYPVQITNTNPTGIAFGIRAMIRLPLGMSYAQNSNLTFPALFFNAGTYKRTTLNATIAGSSILTISLDALQPNTGFVVSGIRFNVDRVLAKNGDFSKIPFTVDALQSALTTAAPSLTLSSPPVASDNVPASLAATLTNVSATAVAGQVVTFVSSITNSGQGSATAITVSLTYEKRLQFISVSGLYLACTAAVVVDATRMKTTCTRSPTLDPLASGSAQFTFKVDEAALAATGATASTAVSLAGTYKDINGDATFTATTLNQNIQAQVDLRLSSIAMRATGAVVPGATVVARITVANMGPSTLAASGVRVTLVYPKDALTPTNASWSSTVTGASFVIPQQFLPRTGLVLDFPFTINAGLDWASTSLAFTASAAPTNLAVVTAAGTLNSMDTTVTVDFRQNIGFAVSSDTLERRVNQIVVSRLRLRNSGPNPTYANVTRTCTVKVTLATTKGSVSVDADSFKTCTAVTANSVYNCPVPVIPVGGSFVLALGYSFNSPTNGSFVGEVSCTNLPDGGSSDVDPSAEDNSVRYDVSVIEYGTISVAIAPITPASIIRTTFPVLMRVLNTATGDGLPAAKGITVTVGYPSDLCDFNEVGTNAVTDNPPSVTIALKSAGTITITVPSLDAAPSEASSLQVRLLFVIHSDVRPQQDVSISATVDSVTTNTNPTKVFLKTMKTVDGIVSSSISVRLDPPEAVRANNVPMRLSDGSFTTSTAPPGNFTATFTLRNLDFSFPAAVAANMTVLLSFGLKGYVPYLSADDYSQSLSQKANTALTAEYNSYAADTDKFNTMAAEQFAPFFNQSSVKVTAPAGVTCTRITETQYRCGVPVLGVDSTAVYVVTMNAITYPRVVGARVILNATTSVIDGAMFTMGLRSPSRTQTTAGIDIRSAILYDATVGSSATITTSKTDTKTIIIAVVCSVVGLVGIALILWKLGFFKRRPKPPTLGDFNSGDFGTSDG* # ORIGINAL: g3290.t1 original gene structure, not modified by PASA NODE_684_length_19109_cov_42.0061 AUGUSTUS gene 2981 4153 . + . ID=g3290;Name=g3290.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS mRNA 2981 4153 . + . ID=g3290.t1;Parent=g3290;Name=g3290.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 2981 4153 . + . ID=g3290.t1.exon1;Parent=g3290.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 2981 4153 . + 0 ID=cds.g3290.t1;Parent=g3290.t1 #PROT g3290.t1 g3290 MASLSLLPLEVFDDHVAPYLANADARALSQTNAQFRSHLRPKCIFRLRRQFAINFHDNVEFRTLVLSVIPKKCLSISLAVDMDLSALPGVHALNIRGLTKVADVPPLGKVVDVSHLGGVYTLNLSGCVGVIDVSALGTVHTLNLCGCVGVVDVSALGAVHTLNLNGCRRVANVSALGGVHTLNLSRCSRVVEVSALGSVHTLQLNECNILSDVSALGGVHTLSLFWCSGVSNVSALGGVHALDLSRCNSVADVSALGGVHTLNLSACHGVSDVSALGGVHTLDLSGCKRVVDVSALGGVYTLNLSGCSGVVDVSALGGVHTLSLSLCKEVVDVSALGRVHSLDLSGCHLVSDVSALGGVHTLNITGCRRLADTSALGLARGGVLIVEDDF* # PASA_UPDATE: g3289.t1, single gene model update, valid-1, status:[pasa:asmbl_8864,status:12],[pasa:asmbl_8865,status:12], valid-1 NODE_684_length_19109_cov_42.0061 . gene 113 1692 . + . ID=g3289;Name=g3289.t1 NODE_684_length_19109_cov_42.0061 . mRNA 113 1692 . + . ID=g3289.t1;Parent=g3289;Name=g3289.t1 NODE_684_length_19109_cov_42.0061 . exon 113 355 . + . ID=g3289.t1.exon1;Parent=g3289.t1 NODE_684_length_19109_cov_42.0061 . CDS 113 355 . + 0 ID=cds.g3289.t1;Parent=g3289.t1;5_prime_partial=true NODE_684_length_19109_cov_42.0061 . exon 822 1176 . + . ID=g3289.t1.exon2;Parent=g3289.t1 NODE_684_length_19109_cov_42.0061 . CDS 822 1176 . + 0 ID=cds.g3289.t1;Parent=g3289.t1 NODE_684_length_19109_cov_42.0061 . exon 1581 1692 . + . ID=g3289.t1.exon3;Parent=g3289.t1 NODE_684_length_19109_cov_42.0061 . CDS 1581 1675 . + 2 ID=cds.g3289.t1;Parent=g3289.t1 NODE_684_length_19109_cov_42.0061 . three_prime_UTR 1676 1692 . + . ID=g3289.t1.utr3p1;Parent=g3289.t1 #PROT g3289.t1 g3289 QHIHALVSVDGELFLLKAGYDAESGRSFFIWAQTTPLLDGPDTVYEWVPSPVAGGDSVYLREEFPLSEYDEMLKTAVIGLKMSLAHNLNRTITSFELLSVLQKCDPPAAEAEPEPEPEPEPEPEPEPAPQPPKPRKPAFVAGRNADDIDRALERVLRENSDYVFENGTIEKVAEGRYKFGDKTLNLDVRNENLLVRVGGGYESLGVWLKHAGSGFVLVRGDDGVYSVSKS* # ORIGINAL: g3292.t1 original gene structure, not modified by PASA NODE_684_length_19109_cov_42.0061 AUGUSTUS gene 11596 14835 . + . ID=g3292;Name=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS mRNA 11596 14835 . + . ID=g3292.t1;Parent=g3292;Name=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 11596 11982 . + . ID=g3292.t1.exon1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 11596 11982 . + 0 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 12207 12482 . + . ID=g3292.t1.exon2;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 12207 12482 . + 0 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 12884 12956 . + . ID=g3292.t1.exon3;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 12884 12956 . + 0 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 13126 13250 . + . ID=g3292.t1.exon4;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 13126 13250 . + 2 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 13549 13663 . + . ID=g3292.t1.exon5;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 13549 13663 . + 0 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 13846 13924 . + . ID=g3292.t1.exon6;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 13846 13924 . + 2 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 14128 14293 . + . ID=g3292.t1.exon7;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 14128 14293 . + 1 ID=cds.g3292.t1;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS exon 14458 14835 . + . ID=g3292.t1.exon8;Parent=g3292.t1 NODE_684_length_19109_cov_42.0061 AUGUSTUS CDS 14458 14835 . + 0 ID=cds.g3292.t1;Parent=g3292.t1 #PROT g3292.t1 g3292 MPSASAVSSDSGGVVVDPLSGGATTNAAPERKESGREQRASTSVPTTPGGPSTPTAAPSTASNKSGNGTGRREDRGRRDSAALGGEGAANVHQRSLQIASMGMYDLGDTLGKGEYSVVRVATHRLTRSRLAMKMLDKERLEEKALQMFFREVQIMKHLRHPNVIRMFEVFDTRRELCLVLEVAGKGDVLDYILQQSNKRLTEEESRRLFHQMLLAVDYCHRKRIFHRDLKAENFLLDDDFNIKLSDFGFANRALPGETLKTFCGSPPYAAPEIHGKQEYNGRCADMWSMGVLLYVLVSGKFPFQGKDMKDAIMNARYRTLWHVSEACRDIIRGLLIVRPSRRMTLPEVMESPWMKEGGFASPTERDRAVRGSSVSLDIDGRMIVSVPVLDELEGLGYARDEVVRSLQDNLFGPVSAMYNLVLNERPSGDETISVPFKTKGMDASDLKTVAEHGVRASTSTSALPATRPTARDGSAAQSNSNNNSNSKESNGEATEPPWDVPHSMVASKPQAIIDNNRAPGSAPGKSSFCTLL* # ORIGINAL: g3961.t1 original gene structure, not modified by PASA NODE_510_length_22122_cov_41.352 AUGUSTUS gene 19975 21848 . + . ID=g3961;Name=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS mRNA 19975 21848 . + . ID=g3961.t1;Parent=g3961;Name=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 19975 20205 . + . ID=g3961.t1.exon1;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 19975 20205 . + 0 ID=cds.g3961.t1;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 20334 20442 . + . ID=g3961.t1.exon2;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 20334 20442 . + 0 ID=cds.g3961.t1;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 20565 20670 . + . ID=g3961.t1.exon3;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 20565 20670 . + 2 ID=cds.g3961.t1;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 21290 21443 . + . ID=g3961.t1.exon4;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 21290 21443 . + 1 ID=cds.g3961.t1;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 21552 21848 . + . ID=g3961.t1.exon5;Parent=g3961.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 21552 21848 . + 0 ID=cds.g3961.t1;Parent=g3961.t1 #PROT g3961.t1 g3961 MLCALAITAVLISNAVTSTTAAANVTYDSAKFGHQNPHRFVLSENDSLEGAFSKFVAHFGKSYAVDGEYERRRENFRRSIERHAMLNARETAAGGKATFGINFLSDLTTDEFRGRYLSSLPEAEVPAARAPRDLRPFVIPEGIPQFVDLAISTVEVVETAYATAGHPPLALSAQQVISCDTMSSACTGGRPERALAYMQKEGLMLDEVYPFVSGEGTAPPCYYDARKVALTLDGAVWNFATGEADMLKAFLSNGTLSVAVNADTWGDYVGGFAQSRVWLDCALPDQQRLIVVCAPSTI* # ORIGINAL: g3959.t1 original gene structure, not modified by PASA NODE_510_length_22122_cov_41.352 AUGUSTUS gene 16486 18006 . - . ID=g3959;Name=g3959.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS mRNA 16486 18006 . - . ID=g3959.t1;Parent=g3959;Name=g3959.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 16486 18006 . - . ID=g3959.t1.exon1;Parent=g3959.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 16486 18006 . - 0 ID=cds.g3959.t1;Parent=g3959.t1 #PROT g3959.t1 g3959 MATTLRSGFRWNLWLITRAHLLSAHASRRRFSGAAPVHTADNGQQPDGRTGQSNAVKTRNVRGTHDLFGQLCADRRAILSKFVTVAESACCSEVSTPVLEHSEIFRRTLGVGSDVVSKEMFTMEDGGDDICLRPENTASIMRAVIASGRSLLLPQRLYYSGLMFRRERPQKGRYREFGQMGVELLGMRGPMADAEAVAMASQFLAAVGVQGSVRLHISTIGSPQARREYARVLASFLRDRGTERLSADSQRRLEDGHVLRILDSKAPEDNDALKDAPRLYDALDAASRDRFEAVLTCIRAMSLPCEVHVDWRLVRGLDYYNDTVFEFVTDALGAQGTVLAGGRYDGLAQAIGGAKQQPISAVGWAAGMERLAMLARSLQGGEEDEAGADECAGVRADVAVVEVRGGPPATCLSSGDAVSAEAMRACLLLRAAGMRTMFHLEGNASRQFIRAAKDGARVAVVVGDGELAGGTLRIKDLITGRQWDIPRESLVDAVRASLVATAPDAL* # ORIGINAL: g3957.t1 original gene structure, not modified by PASA NODE_510_length_22122_cov_41.352 AUGUSTUS gene 5094 9883 . + . ID=g3957;Name=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS mRNA 5094 9883 . + . ID=g3957.t1;Parent=g3957;Name=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 5094 5105 . + . ID=g3957.t1.exon1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 5094 5105 . + 0 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 5257 5376 . + . ID=g3957.t1.exon2;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 5257 5376 . + 0 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 5738 5786 . + . ID=g3957.t1.exon3;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 5738 5786 . + 0 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 5941 6021 . + . ID=g3957.t1.exon4;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 5941 6021 . + 2 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 6180 6307 . + . ID=g3957.t1.exon5;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 6180 6307 . + 2 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 6651 6737 . + . ID=g3957.t1.exon6;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 6651 6737 . + 0 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 6860 7223 . + . ID=g3957.t1.exon7;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 6860 7223 . + 0 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 7458 7559 . + . ID=g3957.t1.exon8;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 7458 7559 . + 2 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 7981 8184 . + . ID=g3957.t1.exon9;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 7981 8184 . + 2 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 8335 8968 . + . ID=g3957.t1.exon10;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 8335 8968 . + 2 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 9131 9256 . + . ID=g3957.t1.exon11;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 9131 9256 . + 1 ID=cds.g3957.t1;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS exon 9433 9883 . + . ID=g3957.t1.exon12;Parent=g3957.t1 NODE_510_length_22122_cov_41.352 AUGUSTUS CDS 9433 9883 . + 1 ID=cds.g3957.t1;Parent=g3957.t1 #PROT g3957.t1 g3957 MADQMSPVLARANVVHGRSFSEDSSPATPTGIRRPHKQSLDSNSSSRSNLSTSLEDLDLTSNSEDEALEACRWLEDAGFPQYVQCYRDRTFVNTTQLKNDHEFLNEHQIEAVTKRLLILNEALEKSGGEKRNDAGDPAQPTTPKDGEPGGAMRERLTSDPPPTALSALWTFRKDSNKWSRAQKQGSSGSLAAIEAVAMAKVAGQKWFHFVRQRSQKKESDDVELCVLTAREVAVLQRLSLTSLTGILERYFPDPAHSKKWRRTVGGITRLLTPKKHIEYAESAVFGVPLSVIIERTGRPLPDVIFGAMTHLSEIGGSIKGIFRKAGSAARIRELKSICEGRQGLDFSDLPAHDVADLVKQYFRELPEPLLTEKLSPQFIACSKLPAPSLCVQALRLAIALLPDENREVLGVLLGLLSKIARLARTVGAHQGNEMGPSNLATVFAPNLFHFPPSKGSLSKFQGTGREVGAHEASNRCLQVMIEEQANLFSVSSDVWMQMTFVFDEHNKPVPSDRRVFDRQNINHIRLTLQRQIESLQADARDKFRSYTPHAKHSGVKVSVRPPESDAVEELVTWRGVTIVAASPSKVIDRIIRQRHMWDKDIVHVDTVEEVSSTMDVYRFTHKGYGSIPARDYCVVRSWHVTESGACHLVATSVDHSAAPLLAGHVRVAVSELSYLVEPYTQSASIGHHHSHHSHHTHYGGPFPSQASSSSLTGTSLSLSSGAREIGKDAGKDAQCSRVTMVSRIDFKGRTPQWYNKGGGSHDVVRLAELRRSFEVPEAAGVETSV* # PASA_UPDATE: g3958.t1, single gene model update, valid-1, status:[pasa:asmbl_7872,status:3], valid-1 NODE_510_length_22122_cov_41.352 . gene 10321 16235 . + . ID=g3958;Name=g3958.t1 NODE_510_length_22122_cov_41.352 . mRNA 10321 16235 . + . ID=g3958.t1;Parent=g3958;Name=g3958.t1 NODE_510_length_22122_cov_41.352 . five_prime_UTR 10321 10440 . + . ID=g3958.t1.utr5p1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 10321 10497 . + . ID=g3958.t1.exon1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 10441 10497 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 10576 10854 . + . ID=g3958.t1.exon2;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 10576 10854 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 10946 11063 . + . ID=g3958.t1.exon3;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 10946 11063 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 11229 11353 . + . ID=g3958.t1.exon4;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 11229 11353 . + 2 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 11549 15376 . + . ID=g3958.t1.exon5;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 11549 15376 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 15606 15752 . + . ID=g3958.t1.exon6;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 15606 15752 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . exon 15921 16235 . + . ID=g3958.t1.exon7;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . CDS 15921 16136 . + 0 ID=cds.g3958.t1;Parent=g3958.t1 NODE_510_length_22122_cov_41.352 . three_prime_UTR 16137 16235 . + . ID=g3958.t1.utr3p1;Parent=g3958.t1 #PROT g3958.t1 g3958 MLKLKKKTAGSVEAECISKDEKHKPADIGRFFRPAREAAVAPQPSPAAPPHADSERTTAPGITPFPPPSKRAFLHAQGTACDDYGGARDNEKDKLRGKTTPRKARRLAVVDSPSPIVSPPVDGADCTDGAARSEHVLWFKSPTSASAARRSAKRRPRDLSDAEVHSIAHMLSETRQPHSARKRARKGDETIVKEAYVQPMHMGPKENGRSLVTRWQCSDSTGASDTSGGEGDGHAGRGERQARTVGRDTADVRVAVAVQAHTTQNATPDARGHETRAMRRNPFLRRHDSAAAAPDAVISALASLTGRKDGVASEASEHTTAEHAMPPKGAPHVAVEMGVDTDEYGGDVDDLLGLLDAAMLDVSAHDGTSSSGTSEQPIAGNKPTVVVGGISGRAVGSPGFGGGGGDDDDDSAFDDDLAFLGSHMDAIEQCSGLTDRAADGAADGFACPNNCRVADASCGHRMNGGPPLPFDASVRYTIRTLATRPSQSHPGSEFIAEIAAESPHADAVHRRKQHSLAQEGGQDASASAMPPLRLVLRGRWSSTALKVGDVLRVDSPAWMPSGCGLGEWLVDDAVGIAIVAPDCLISGTRVAESFTCVRRGVLNERFKGPSNAAGVAILAGSMLHEVFQRALASRNFSEAALAEYCEATIATHLEDICCLGDTEAGMRDRLVESAAPLGAWSRAFVREAPSPTAVITYDGASDAPVGGDRRAVSIRSLVDCEENYWSPKFGIKGKVDATIEACIALETADGLPRALGGLPGNVDTLRTCIVPLELKTGKGGGAAAAAHRAQLMLYSLMMAERHASSVGEGGLLFYLRSGEMTGVSATRAEIRDLLIARNELAQYLSVEDAMPPMLQQERACRNCFQSETCAMYHRAVEDGTTATSGMGSTLEEHTGHLSPAQAAYFKRWVSLVSMEAAEARGGRQEVWTMTSLVRESRGRCFARMALSGAPESVGDSFLYTFVRCGAVPGARMRGDGLVGPVALTDVGLSTGDPIVVGIDGGECAIANGFLRDVRANAVTVSLDRKLPAAYALAGSSAASTGAGDPLLFRIDRDDFSAGMGLVRQNVATLLRRGSDVRRRHLIVDLVAPQFRDESEIVCALSASATEGLNSDQIGALGRVLAADDYAIVLGMPGTGKTTTIARAVRLLVERGKTVLITSYTHTAVDTILLKLIEEGVPFARLGSPDKVHPAIRKHTPDGAGPFRTVAELEGFYRSRPVVATTCLGISHPLFMRRSFDVCIVDEASQITEPVCLGPLQLARCFVLVGDHNQLPPLVVSAKARDEGLAVSLFRRLHDAHPRAVAALEHQYRMNADILLLTNTLIYNNRLKCGTPAVAQSSLAIPNPAALPSFQSQPAVGANWLRDLIDPARKVVFVDTDLVPAPESKFGDSVRNDIEAALVAQLASGLVACGVPPSSVGIISPYRAQLTAIRGFMRHVRGSQGLEVHTVDKYQGRDKDCIIVSLVRSNSAGNVGDLMKDWRRVNVAFTRAKQKLVIFGSMGTFRHDELFGRFRLLLEENQWVYQLPAGAQSVYASFNTTQTTQATQSPHASPHKHTAMDACHPDATAHSPRVIDGRQRARLGPIALNVLSGV* # PASA_UPDATE: g3960.t1, single gene model update, valid-1, status:[pasa:asmbl_7873,status:12], valid-1 NODE_510_length_22122_cov_41.352 . gene 18435 19696 . + . ID=g3960;Name=g3960.t1 NODE_510_length_22122_cov_41.352 . mRNA 18435 19696 . + . ID=g3960.t1;Parent=g3960;Name=g3960.t1 NODE_510_length_22122_cov_41.352 . five_prime_UTR 18435 18491 . + . ID=g3960.t1.utr5p1;Parent=g3960.t1 NODE_510_length_22122_cov_41.352 . exon 18435 19696 . + . ID=g3960.t1.exon1;Parent=g3960.t1 NODE_510_length_22122_cov_41.352 . CDS 18492 19364 . + 0 ID=cds.g3960.t1;Parent=g3960.t1 NODE_510_length_22122_cov_41.352 . three_prime_UTR 19365 19696 . + . ID=g3960.t1.utr3p1;Parent=g3960.t1 #PROT g3960.t1 g3960 MSTRNQDKPLSEVLKDAGKRALGGGLPGAAAMGIQVFSLMWLRTTMNYQYRHGTTTAVALKTLYSQGGILRFYKGVGPALIQGPLSRFGDTASNAGILSLLNNYDQTKNLPVGVKTAAASVTAGLFRIILTPVDTVKTIMQVEGSNGIPALAAKIKANGVRVMFHGAVATAAATMVGHFPWFFTFNLLDERIPRQTVLYKKLMRNAVIGFVSSVVSDTCSNSIRVIKTTKQTSVTAISYPQAVKLVVDSEGVMGLFGRGLKTRILTNGLQGLLFTVLWKMLEEQYAKRVN* # PASA_UPDATE: g3956.t1, single gene model update, valid-1, status:[pasa:asmbl_7871,status:3], valid-1 NODE_510_length_22122_cov_41.352 . gene 457 4382 . + . ID=g3956;Name=g3956.t1 NODE_510_length_22122_cov_41.352 . mRNA 457 4382 . + . ID=g3956.t1;Parent=g3956;Name=g3956.t1 NODE_510_length_22122_cov_41.352 . five_prime_UTR 457 847 . + . ID=g3956.t1.utr5p1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 457 884 . + . ID=g3956.t1.exon1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 848 884 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 995 1029 . + . ID=g3956.t1.exon2;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 995 1029 . + 2 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 1118 1163 . + . ID=g3956.t1.exon3;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 1118 1163 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 1253 1510 . + . ID=g3956.t1.exon4;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 1253 1510 . + 2 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 1729 1788 . + . ID=g3956.t1.exon5;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 1729 1788 . + 2 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 1873 1963 . + . ID=g3956.t1.exon6;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 1873 1963 . + 2 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 2096 2366 . + . ID=g3956.t1.exon7;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 2096 2366 . + 1 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 2533 2790 . + . ID=g3956.t1.exon8;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 2533 2790 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 2959 3768 . + . ID=g3956.t1.exon9;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 2959 3768 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 3875 3997 . + . ID=g3956.t1.exon10;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 3875 3997 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . exon 4112 4382 . + . ID=g3956.t1.exon11;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . CDS 4112 4234 . + 0 ID=cds.g3956.t1;Parent=g3956.t1 NODE_510_length_22122_cov_41.352 . three_prime_UTR 4235 4382 . + . ID=g3956.t1.utr3p1;Parent=g3956.t1 #PROT g3956.t1 g3956 MNKYEVQGVVGEGAYGVVLKCRNKETNEIVAIKKFKEGEDDEAVRKTTLRELKVLRMLKQENIVNLKEAFRRKGKLYLVFEYVEKNMLELLEERPNGVSIDHVRLYIYQLVKAIHWCHQNDVIHRDIKPENLLISSDYVLKLCDFGFARTLAPKGGGRYTDYVATRWYRAPELLLGAKYGKAVDIWSIGCIMGELTDGEPLFPGESEIDQLYTIQSVLGPLPPHQMDLFLKNPRFMGLKFPDMSEPITITKKYKGKLDSAALDFMQGTLQMDPKERFSSDDCLAHPFFDPIRNEEPHQQLLYLDAAGDTGARPDSSVVEAADRAGLSSARGKSAGRNRPTSARPQSSRSVHRVSSISSLEGRGYNQSSPGESDEDERSQARHRQSSTKQDVGYGGASNPGFARTKGDDRAASRTHVREFSTSGGEESADAEDDGRLMRRRGGGQKQSKGRANGPLARMAASEEVPQKSSGNFRPHSGEREREREREREREKERERERERERERVRERERERESVRERERERYDDREVAGSSMGMRDYGYERPLSVADSGYVDGGAAGGGSIGRLSRRNPNAHALPAETSRVYGAPQPRQRTGDARKRVQPLSLDAHASQSQMSVGMGRSGTQDFGPFSGGGGPLSSQKLKYGTTQPARGASIARGGKPSPYDKTYADAVPVAGSARGRLPKQLPQLSHDGRGESPDGRSYALR* # ORIGINAL: g9802.t1 original gene structure, not modified by PASA NODE_2250_length_7082_cov_41.1647 AUGUSTUS gene 3192 4551 . - . ID=g9802;Name=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS mRNA 3192 4551 . - . ID=g9802.t1;Parent=g9802;Name=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS exon 3992 4551 . - . ID=g9802.t1.exon1;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS CDS 3992 4551 . - 0 ID=cds.g9802.t1;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS exon 3724 3853 . - . ID=g9802.t1.exon2;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS CDS 3724 3853 . - 1 ID=cds.g9802.t1;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS exon 3520 3594 . - . ID=g9802.t1.exon3;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS CDS 3520 3594 . - 0 ID=cds.g9802.t1;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS exon 3192 3257 . - . ID=g9802.t1.exon4;Parent=g9802.t1 NODE_2250_length_7082_cov_41.1647 AUGUSTUS CDS 3192 3257 . - 0 ID=cds.g9802.t1;Parent=g9802.t1 #PROT g9802.t1 g9802 MTATRRSARLSRGGENESQASSQQSNVDYNSDAGASQASNADTDTAVSTPSRTPRRGRRAAAPKEEPLVEKKEEEEDEQSQPIVTPSKRARTAAAASKPEKIERRSAPAPAPAPAPAPAPARVPAPAPDVVAPVVATKESASDDVKAVPNGKQLAVDAAKARVSGEVPPVRGKAKSGRVWKTVQTKPASHLKVIKRSDKAFERRAAEDKLRKAVKDLERQQKAAEEKKLEEHKKRVAEGRRRREENEKKSQIVQVITNSAKIKRMKRKQLKQIETR* # PASA_UPDATE: g9800.t1, single gene model update, valid-1, status:[pasa:asmbl_3880,status:12], valid-1 NODE_2250_length_7082_cov_41.1647 . gene 128 1493 . - . ID=g9800;Name=g9800.t1 NODE_2250_length_7082_cov_41.1647 . mRNA 128 1493 . - . ID=g9800.t1;Parent=g9800;Name=g9800.t1 NODE_2250_length_7082_cov_41.1647 . five_prime_UTR 1377 1493 . - . ID=g9800.t1.utr5p1;Parent=g9800.t1 NODE_2250_length_7082_cov_41.1647 . exon 128 1493 . - . ID=g9800.t1.exon1;Parent=g9800.t1 NODE_2250_length_7082_cov_41.1647 . CDS 128 1376 . - 0 ID=cds.g9800.t1;Parent=g9800.t1;3_prime_partial=true #PROT g9800.t1 g9800 MTLPFLLRTDCAALNLPLAHPRPALVATMGGGSLSATPNIKMPVVAMVLACALFTTAASIDPVVVNGSGASFPALTYRGWIDAFVASRPDLASKYKITYDSVGSDKGRVAMFNGRVIFGASDAPISADESALYPRMRMIPTIAGSIALAYNIESVSASSSKRLVLSRAAIFGIFSGSITYWNDTVLTSLNPTLGLPAAPIVVIVRSDGSGTSESFLRALNKFNNSTGVFADKVTTQFPKYLVPSSIGASRNTGVAATISSVPNSIGYLDSSVSSDNLCNAQLPTALVINSHGNAVEANRSNVINALEGTSHLFQNTSYLFAPIVDSAGNFSYPMALITSIIVSLEYPADLYDATVGLVTFILWVYGSDVADYVTTQTKTVIVPESIRAKAKEVLMSIMCGNRTVYNAAVLELEGLK # PASA_UPDATE: g9801.t1, single gene model update, valid-1, status:[pasa:asmbl_3881,status:3], valid-1 NODE_2250_length_7082_cov_41.1647 . gene 1898 3028 . + . ID=g9801;Name=g9801.t1 NODE_2250_length_7082_cov_41.1647 . mRNA 1898 3028 . + . ID=g9801.t1;Parent=g9801;Name=g9801.t1 NODE_2250_length_7082_cov_41.1647 . five_prime_UTR 1898 2011 . + . ID=g9801.t1.utr5p1;Parent=g9801.t1 NODE_2250_length_7082_cov_41.1647 . exon 1898 3028 . + . ID=g9801.t1.exon1;Parent=g9801.t1 NODE_2250_length_7082_cov_41.1647 . CDS 2012 2614 . + 0 ID=cds.g9801.t1;Parent=g9801.t1 NODE_2250_length_7082_cov_41.1647 . three_prime_UTR 2615 3028 . + . ID=g9801.t1.utr3p1;Parent=g9801.t1 #PROT g9801.t1 g9801 MSAFSIACRSTGRAAAAAALPVLRPSLSLPNHGVLSALRLPWKGVNARFRPPISALRAPFSSTAICRFSKKETNSGASAGDGNDPATDTPVTQHAIASIKPMMQIFFTCRSCETRTTKRFSKHSYTKGIVMIKCPGCEKLHLIADNIGWFNHFDGKNIEDFLAQKGESVKFVKGDEAAALELTVDDIAGASNPAIAVTKA* # PASA_UPDATE: g9803.t1, single gene model update, valid-1, status:[pasa:asmbl_3882,status:12], valid-1 NODE_2250_length_7082_cov_41.1647 . gene 5166 6846 . + . ID=g9803;Name=g9803.t1 NODE_2250_length_7082_cov_41.1647 . mRNA 5166 6846 . + . ID=g9803.t1;Parent=g9803;Name=g9803.t1 NODE_2250_length_7082_cov_41.1647 . five_prime_UTR 5166 5327 . + . ID=g9803.t1.utr5p1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . exon 5166 5402 . + . ID=g9803.t1.exon1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . CDS 5328 5402 . + 0 ID=cds.g9803.t1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . exon 5733 5847 . + . ID=g9803.t1.exon2;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . CDS 5733 5847 . + 0 ID=cds.g9803.t1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . exon 5976 6102 . + . ID=g9803.t1.exon3;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . CDS 5976 6102 . + 2 ID=cds.g9803.t1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . exon 6291 6493 . + . ID=g9803.t1.exon4;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . CDS 6291 6493 . + 1 ID=cds.g9803.t1;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . exon 6739 6846 . + . ID=g9803.t1.exon5;Parent=g9803.t1 NODE_2250_length_7082_cov_41.1647 . CDS 6739 6846 . + 2 ID=cds.g9803.t1;Parent=g9803.t1;3_prime_partial=true #PROT g9803.t1 g9803 MASFTSRSVQHGVPDLVLLDEISENSILTCLRGRFGADLIYTYIGNVLISANPFKDLPIFGAEQIRQYYGKQMYEVPPHIFALADEAYRNIKTKAQDQCIIITGESGAGKTEAAKLIMKFVAAVSGDNKGGSKIKDQLLQSNPVLEAFGNAKTNRNYNSSRFGKYMDMQFDFKADPVGGKITNYLLEKSRVTSQGKGERNFHIFYLLLA # ORIGINAL: g7307.t1 original gene structure, not modified by PASA NODE_944_length_15667_cov_46.7257 AUGUSTUS gene 136 2201 . - . ID=g7307;Name=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS mRNA 136 2201 . - . ID=g7307.t1;Parent=g7307;Name=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 1365 2201 . - . ID=g7307.t1.exon1;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 1365 2201 . - 0 ID=cds.g7307.t1;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 994 1208 . - . ID=g7307.t1.exon2;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 994 1208 . - 0 ID=cds.g7307.t1;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 719 827 . - . ID=g7307.t1.exon3;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 719 827 . - 1 ID=cds.g7307.t1;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 136 555 . - . ID=g7307.t1.exon4;Parent=g7307.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 136 555 . - 0 ID=cds.g7307.t1;Parent=g7307.t1 #PROT g7307.t1 g7307 MILTRKALATPEKRSTLSPSNTSAQSRFSAATASPSRSPHLHFSTPQRCKLPQRNSPGSMRFTEPVLCTPPMRASPRHQGSNKRPHDDNDDTDNTHSDCPGSSERAKQAPRAEALRLKRRRIQDEDHTSDDDADTDYVQTTTTRSPSSHGTAPRAQRASQAKPSSSPSVASKKGGDGATATPKTASRVPNRHSPRVSVRGALGHTATTLKVQPSPHAQSRRSPRSARRAATSASETLTRDDGHVSTTHAETINSHGTADDVEERRMPPRATVDSSTQTPDETVNIPKGSVAHFPPVTVYRPETARRSPSSPDGSKLTWVAAAKIILRDMDKPMHYKDILKEIKKRNLVEHSSSKPEMTLMARLNEHTREPKCTFFKATDKPGYYGLRPHLRFRMSTTTQALSEMAESEANQRGASESTECAGLTQSDEGMGESEATQRSGASGLCTPRRANKHADDSVEQRPPPMRYATRRNTAQAVEDSPSRTASAHGRSGVDGQSQLCRVAQMNDYVEFFEAINLLHDSAAGRM* # ORIGINAL: g7310.t1 original gene structure, not modified by PASA NODE_944_length_15667_cov_46.7257 AUGUSTUS gene 10623 12620 . - . ID=g7310;Name=g7310.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS mRNA 10623 12620 . - . ID=g7310.t1;Parent=g7310;Name=g7310.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 12500 12620 . - . ID=g7310.t1.exon1;Parent=g7310.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 12500 12620 . - 0 ID=cds.g7310.t1;Parent=g7310.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 10623 12337 . - . ID=g7310.t1.exon2;Parent=g7310.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 10623 12337 . - 2 ID=cds.g7310.t1;Parent=g7310.t1 #PROT g7310.t1 g7310 MAEQKRLSARVLGLAAASMVIVAYMYWSASSDFDNPSYGAVDVRVAVGEKADHTAQGIHGGVDSRNRPYSSHPASVDILRLRRTGVVTGLSRAARATHSSASATHSSANATHSSASATHSSASATHSSASATHNIQDELISSSVSQSTAAAAVGSPLSFPTAHVFDDAAPTPSCTIDMIGDDGESLSDVSNDDEHREGDEDSTYGNSTMGDVDLSPEALLGDLEGSIEGEGVSSSALSSSTTQKTATATATPTPTSTPMPYECSVNFISPAFSPSYSADDYDLEAFDPMSIGRLPNCAPQDVTNLIGYWTARCPSPCAYSKLHECDLNTLTWRPRGCRLHPIINDRGAVVRCLNRRHFLFVGDSTLRGLFNRMLDVVGLPITPPFFHSAFNTSLGIGFSGMFRYYKPDLLFDPTDPATWDGVLDRLTQEQLTPHLHEDIFGVSGSAPSVYASSPAYAGKELLVILGGLRVDHTTIESVSLWLQAHPFAMKRRTLAFGPGVARWTPIETSRGYAESGRDAASRVRSTARANPLLPEWKWPSRENAIVDFFDVWPVVGPLWFMSKRDECLCHFYWEKEKAPARTRVWGVVNDQIANVMLNYVCAESMAPMPFQ* # ORIGINAL: g7311.t1 original gene structure, not modified by PASA NODE_944_length_15667_cov_46.7257 AUGUSTUS gene 13272 15479 . + . ID=g7311;Name=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS mRNA 13272 15479 . + . ID=g7311.t1;Parent=g7311;Name=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 13272 13644 . + . ID=g7311.t1.exon1;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 13272 13644 . + 0 ID=cds.g7311.t1;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 13949 14100 . + . ID=g7311.t1.exon2;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 13949 14100 . + 2 ID=cds.g7311.t1;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 14244 14385 . + . ID=g7311.t1.exon3;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 14244 14385 . + 0 ID=cds.g7311.t1;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 14618 14796 . + . ID=g7311.t1.exon4;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 14618 14796 . + 2 ID=cds.g7311.t1;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 15222 15479 . + . ID=g7311.t1.exon5;Parent=g7311.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 15222 15479 . + 0 ID=cds.g7311.t1;Parent=g7311.t1 #PROT g7311.t1 g7311 MASPVKKPLAADAPRVMRGPTKAPMVVRQNCLNAIYRELSAVFRGEHKQRAHDAAIEIETAVHDAVSTSAGYSSKAGSTVGRFKSEMRKRNGGKPPPTQRRKAADDEDAKAAEEVVQLLLNKPAGNELTVAMVTPYLLTVEQLVDNGFVVSPSSMPALKESETANNDAAIADAKEGEADNEEAPVGSEQTCMRCKEPLADTGTVPPPSACTYHPGRSWTRRKGRWVEGNMVVYSCCEALSGTPGCRTAACHVPAGLPLTFEDCRMTVPGERGAKVYGLDCEMVFTTSGCELARVTLVDGCGKPALDRIVRPQGIVVDYNTEFSGITRETFASPDTIAFEEAQNLVLQLVTCHSVLVGHSLESDLRALK # PASA_UPDATE: g7308.t1, single gene model update, valid-1, status:[pasa:asmbl_10064,status:12], valid-1 NODE_944_length_15667_cov_46.7257 . gene 3908 6794 . - . ID=g7308;Name=g7308.t1 NODE_944_length_15667_cov_46.7257 . mRNA 3908 6794 . - . ID=g7308.t1;Parent=g7308;Name=g7308.t1 NODE_944_length_15667_cov_46.7257 . five_prime_UTR 6743 6794 . - . ID=g7308.t1.utr5p1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 6733 6794 . - . ID=g7308.t1.exon1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 6733 6742 . - 0 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 5913 6379 . - . ID=g7308.t1.exon2;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 5913 6379 . - 2 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 5511 5768 . - . ID=g7308.t1.exon3;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 5511 5768 . - 0 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 5242 5305 . - . ID=g7308.t1.exon4;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 5242 5305 . - 0 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 4741 5060 . - . ID=g7308.t1.exon5;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 4741 5060 . - 2 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 4475 4578 . - . ID=g7308.t1.exon6;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 4475 4578 . - 0 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 4249 4327 . - . ID=g7308.t1.exon7;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 4249 4327 . - 1 ID=cds.g7308.t1;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . exon 3908 4099 . - . ID=g7308.t1.exon8;Parent=g7308.t1 NODE_944_length_15667_cov_46.7257 . CDS 3908 4099 . - 0 ID=cds.g7308.t1;Parent=g7308.t1 #PROT g7308.t1 g7308 MSEVKKRKSTKTDDVGGAQESQDFVIKPEKVTPTLDTSKWPLLLKNYDKLNVRTGHYTPIPNGCSPLKRPIHDYVRYGVINLDKPSNPSSHEVVAWIRRILRVDKTGHSGTLDPKVTGSLIVCIDRATRLVKSQQGAGKEYVCIVRLHDAIESELKLARGIETLTGALFQRPPLIAAVKRQLRIRTIYESKLIEFDKERHLAVFWVSCEAGTYVRTLCVHLGLLLGVGGHMQELRRVRSGVLSEMDNAFTMHDVLDAQWVYDNNKDETYLRRVVKPLEMLLVGHKRIVVKDSAVNAICYGAKLMVPGLLRFESGVEVGEEVVLMTTKGEAIALGIAQMTTAVMATCDHGIVAKIKRVVMERDTYPRRWGLGPKAVEKKKMIKDGKLDKYGRPNESTPNTWSKNYVDYRGDAVSADVKMEEDVKPLIEELKSDKKRKHESDSEEEKPVVKKEKKEEKKEKKEKKEKKEEKEDKKEEKKEKKEKKEKKEKKSKKDDMSE* # ORIGINAL: g7309.t1 original gene structure, not modified by PASA NODE_944_length_15667_cov_46.7257 AUGUSTUS gene 7668 10294 . - . ID=g7309;Name=g7309.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS mRNA 7668 10294 . - . ID=g7309.t1;Parent=g7309;Name=g7309.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 10144 10294 . - . ID=g7309.t1.exon1;Parent=g7309.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 10144 10294 . - 0 ID=cds.g7309.t1;Parent=g7309.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS exon 7668 9811 . - . ID=g7309.t1.exon2;Parent=g7309.t1 NODE_944_length_15667_cov_46.7257 AUGUSTUS CDS 7668 9811 . - 2 ID=cds.g7309.t1;Parent=g7309.t1 #PROT g7309.t1 g7309 MATGGGRVTAGGQHILVDPNGVEVCLLFLKYGNCRFKEKCKRAHWRPPLNETELQSGAPDASQNNLSANTGSGHPSDNNERQPLSLPPSPIFTPHTPHTPVWRPQPQPTQPQQQQQRHLFPQSHATYPAQLPQALPPFHPIAHQPWSAHPPQFSFGIFPPPRPPPPPAQFAYSAVPKFIESAVHIGSNQLQSGAGSAVLPGGGTLQHKSPTTTAVATRPPGESTDARDKQTPPPPKASRAIPSPDTPEDLKSIMESSFVRVFVGPLECARQRHRASVEEGMYAQNGAVCDAKTGRLIVPWDPATATEGIANSSMPSRQRQAKSVSTTSKAMSGVRRVGDVPGRGIPQIPQAIARRKRLKRLLKRLRRSHWEAKTALSVRLATPPTSYLLTVNLARVNLWRIRPYVYALVLGALLARTSNVWAPPSSDIPSAMATVTSTTSNPASMIGGCRAAVAGAGTLATATKGANTAGRSSTPINANSNTGASTVDSTDVCVGASACASASANYRTTNLAPVALVRESELWMGIGDCIIGWCHAMAQPLPTPPQQRPVMPTGKTTDKIAGKDCSKFGMKTASTTELSRGQCEVVAGSTAGGVRKSGNGGSVGARKLKLAKRVDATRPGGPLAMEGRLRRMGLREVESRLLVSHLWRVLWACSQSTTGVSREIARCEAQVKKKSRASLMYAVACAAALPASRARRDVVVNFATTTPRIPASVREGIAAEKERAGATGAEITRERHSNKDGSIGGAQRRMELIRRLQQMKETQT* # PASA_UPDATE: g2832.t1, single gene model update, valid-1, status:[pasa:asmbl_7904,status:12], valid-1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . gene 80 896 . + . ID=g2832;Name=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . mRNA 80 896 . + . ID=g2832.t1;Parent=g2832;Name=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . five_prime_UTR 80 81 . + . ID=g2832.t1.utr5p1;Parent=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . exon 80 238 . + . ID=g2832.t1.exon1;Parent=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . CDS 82 238 . + 0 ID=cds.g2832.t1;Parent=g2832.t1;5_prime_partial=true NODE_5167_length_985_cov_33.7165_potentialcontaminant . exon 459 529 . + . ID=g2832.t1.exon2;Parent=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . CDS 459 529 . + 2 ID=cds.g2832.t1;Parent=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . exon 726 896 . + . ID=g2832.t1.exon3;Parent=g2832.t1 NODE_5167_length_985_cov_33.7165_potentialcontaminant . CDS 726 896 . + 0 ID=cds.g2832.t1;Parent=g2832.t1 #PROT g2832.t1 g2832 HDDTLPWGRPGAGAPLYDESGNIITNPRRTTESGEGTHGTSQRARKEMMQRLEHDIAYKREQQHQEKNRDLEEERKMIKDGMLKLGAGAGYAKKTASGTLFPYQGRPTTDVINNQVRVCDKCGRKIGYIQTH* # ORIGINAL: g9989.t1 original gene structure, not modified by PASA NODE_2655_length_5535_cov_41.3288 AUGUSTUS gene 5195 5431 . - . ID=g9989;Name=g9989.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS mRNA 5195 5431 . - . ID=g9989.t1;Parent=g9989;Name=g9989.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 5195 5431 . - . ID=g9989.t1.exon1;Parent=g9989.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 5195 5431 . - 0 ID=cds.g9989.t1;Parent=g9989.t1 #PROT g9989.t1 g9989 MRLTPAHLHGLHATPQVRIMVSSLVEVGMGRWDAAVIPGVLSGKITRPTVKVSPAHGLYLCNVEYPPECLHMDEDDSA* # ORIGINAL: g9988.t1 original gene structure, not modified by PASA NODE_2655_length_5535_cov_41.3288 AUGUSTUS gene 231 3841 . - . ID=g9988;Name=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS mRNA 231 3841 . - . ID=g9988.t1;Parent=g9988;Name=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 3750 3841 . - . ID=g9988.t1.exon1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 3750 3841 . - 0 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 3346 3392 . - . ID=g9988.t1.exon2;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 3346 3392 . - 1 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 2933 3006 . - . ID=g9988.t1.exon3;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 2933 3006 . - 2 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 2494 2643 . - . ID=g9988.t1.exon4;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 2494 2643 . - 0 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 2121 2244 . - . ID=g9988.t1.exon5;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 2121 2244 . - 0 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 1587 1844 . - . ID=g9988.t1.exon6;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 1587 1844 . - 2 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 1258 1389 . - . ID=g9988.t1.exon7;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 1258 1389 . - 2 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 868 930 . - . ID=g9988.t1.exon8;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 868 930 . - 2 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 451 605 . - . ID=g9988.t1.exon9;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 451 605 . - 2 ID=cds.g9988.t1;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS exon 231 291 . - . ID=g9988.t1.exon10;Parent=g9988.t1 NODE_2655_length_5535_cov_41.3288 AUGUSTUS CDS 231 291 . - 0 ID=cds.g9988.t1;Parent=g9988.t1 #PROT g9988.t1 g9988 MSSNNSDLVTVAQVREMIDAALAARQYVTLSVFNYLSYLFTALMIMVMQLGFVLLEAGAVRTANTTNIVLKNMINMAIGMLMWWLCGYGFAFGASDNAFIGTNSFLLLSTNPLTDGYFFLQMMFGITAVTIISGAMAERTNLYAYFAITVFLAGFVYPVVAHWAWSGNGWLHSLDYIDHAGSSVVHAVGGTAGLVGCISLGSRIGRFDGEGRPRPLPGHSTALFSLGALFLWIGFYAFNVSSGNNFTDVTTLERIVVNSSLSATSAAITALFFVKWKDNRWSLLISSNALLAGLVAICSGCATMRSWGGLLTGFSSAFAMIGMSKLLLHMKVDDPLDAVPVHLGGGATGVIMSGLISAKSSLFMTGSIRQLGIQLLGLVTIVAWT # ORIGINAL: g389.t1 original gene structure, not modified by PASA NODE_6667_length_528_cov_403.892 AUGUSTUS gene 1 528 . - . ID=g389;Name=g389.t1 NODE_6667_length_528_cov_403.892 AUGUSTUS mRNA 1 528 . - . ID=g389.t1;Parent=g389;Name=g389.t1 NODE_6667_length_528_cov_403.892 AUGUSTUS exon 1 528 . - . ID=g389.t1.exon1;Parent=g389.t1 NODE_6667_length_528_cov_403.892 AUGUSTUS CDS 1 528 . - 0 ID=cds.g389.t1;Parent=g389.t1 #PROT g389.t1 g389 AKKQSTVVIEESDDPHGVFAFDAESVSVSTTEEDEAGAGSVVRLRIVRSAGTIEKESVSWTSTSKDAAGEWSPSSGVVQFGDEQSEGFIELTIKADSTPELEQTISVLLTFVNGGGRFAETQTSATVVIAESDDARGVFEIDSGSATVVVPEEDTAGAGSKVQVRVIRKAGLFSAQ # ORIGINAL: g1390.t1 original gene structure, not modified by PASA NODE_4221_length_1997_cov_34.1249 AUGUSTUS gene 454 1896 . + . ID=g1390;Name=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS mRNA 454 1896 . + . ID=g1390.t1;Parent=g1390;Name=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS exon 454 571 . + . ID=g1390.t1.exon1;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS CDS 454 571 . + 2 ID=cds.g1390.t1;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS exon 895 1009 . + . ID=g1390.t1.exon2;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS CDS 895 1009 . + 1 ID=cds.g1390.t1;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS exon 1449 1607 . + . ID=g1390.t1.exon3;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS CDS 1449 1607 . + 0 ID=cds.g1390.t1;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS exon 1822 1896 . + . ID=g1390.t1.exon4;Parent=g1390.t1 NODE_4221_length_1997_cov_34.1249 AUGUSTUS CDS 1822 1896 . + 0 ID=cds.g1390.t1;Parent=g1390.t1 #PROT g1390.t1 g1390 STKVAISYSRLPQTVIPGDRILVGDGLLGFTVVALTHVSVKCRVDNDGMLGETKGVNLPGKKVDLPGVTEKDKADILWGVQQGVDLIAASFIRKPADVHEVRRLLGDTKIKIIAKIENQEGLDNFDAILQVADGVMVSVDACCIIRQPVFYGTE* # ORIGINAL: g122.t1 original gene structure, not modified by PASA NODE_3220_length_3979_cov_37.4248 AUGUSTUS gene 152 1563 . + . ID=g122;Name=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS mRNA 152 1563 . + . ID=g122.t1;Parent=g122;Name=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 152 278 . + . ID=g122.t1.exon1;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 152 278 . + 2 ID=cds.g122.t1;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 586 746 . + . ID=g122.t1.exon2;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 586 746 . + 1 ID=cds.g122.t1;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 938 996 . + . ID=g122.t1.exon3;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 938 996 . + 2 ID=cds.g122.t1;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 1107 1247 . + . ID=g122.t1.exon4;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 1107 1247 . + 0 ID=cds.g122.t1;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 1366 1563 . + . ID=g122.t1.exon5;Parent=g122.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 1366 1563 . + 0 ID=cds.g122.t1;Parent=g122.t1 #PROT g122.t1 g122 SRRKATAEALTDFRDNTAAVECDVHSEAEVDALMAEHDIAVSLIPYTLHPLIIKSAVKHKKHFVSTSYISPAMAEFDQAAKDANVTILNELGVDPGIDHLYAVKTIADVHAEGGKVLSFLSYCGGLPAPEASNNPLGYKFSWSPRGVLLAVKNTGKFKENGQVVTIEGKDLLRKGAKPIDTYPAFAVEGYPNRDSTPYEQRYEIPEAHTILRGTLRYKASRVCPALT* # ORIGINAL: g123.t1 original gene structure, not modified by PASA NODE_3220_length_3979_cov_37.4248 AUGUSTUS gene 1896 3698 . + . ID=g123;Name=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS mRNA 1896 3698 . + . ID=g123.t1;Parent=g123;Name=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 1896 2068 . + . ID=g123.t1.exon1;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 1896 2068 . + 0 ID=cds.g123.t1;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 2409 2486 . + . ID=g123.t1.exon2;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 2409 2486 . + 1 ID=cds.g123.t1;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 2732 2888 . + . ID=g123.t1.exon3;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 2732 2888 . + 1 ID=cds.g123.t1;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 3093 3201 . + . ID=g123.t1.exon4;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 3093 3201 . + 0 ID=cds.g123.t1;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS exon 3583 3698 . + . ID=g123.t1.exon5;Parent=g123.t1 NODE_3220_length_3979_cov_37.4248 AUGUSTUS CDS 3583 3698 . + 2 ID=cds.g123.t1;Parent=g123.t1 #PROT g123.t1 g123 MLSQLLHGKQGNPAFVQTLADIGFLSDEQHAFLAKDASPVTWRNVVQSLLGTPTNVTSDLAEAIAAKAGLSGTEKDRILRGIKWLGLLSDAEVERRGTYLDTLCATLEKKLTYAPGERDMVLLQHTFEIENKDGSKETRKCILLEYGIPNGDTAMARTVGVPCAIGVQLILDGKITRRGVIAPLTKDIYEPVLELLEKEKIGCIEETFRD* # PASA_UPDATE: g13038.t1, single gene model update, valid-1, status:[pasa:asmbl_6379,status:3], valid-1 NODE_3662_length_2997_cov_38.0493 . gene 1221 2957 . + . ID=g13038;Name=g13038.t1 NODE_3662_length_2997_cov_38.0493 . mRNA 1221 2957 . + . ID=g13038.t1;Parent=g13038;Name=g13038.t1 NODE_3662_length_2997_cov_38.0493 . five_prime_UTR 1221 1277 . + . ID=g13038.t1.utr5p1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 1221 1322 . + . ID=g13038.t1.exon1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 1278 1322 . + 0 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 1497 1617 . + . ID=g13038.t1.exon2;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 1497 1617 . + 0 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 1754 1849 . + . ID=g13038.t1.exon3;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 1754 1849 . + 2 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 2032 2094 . + . ID=g13038.t1.exon4;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 2032 2094 . + 2 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 2280 2380 . + . ID=g13038.t1.exon5;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 2280 2380 . + 2 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . exon 2542 2957 . + . ID=g13038.t1.exon6;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . CDS 2542 2844 . + 0 ID=cds.g13038.t1;Parent=g13038.t1 NODE_3662_length_2997_cov_38.0493 . three_prime_UTR 2845 2957 . + . ID=g13038.t1.utr3p1;Parent=g13038.t1 #PROT g13038.t1 g13038 MATIHDAEDGLPVVLDHNDFTKGLLAKYPNLVVLRPTPQVVALHTIIRDVETPRNDFVFYADRLIRLLIEEGLCLVPFGRKTVITPTGDKYEGLEFTSKLAGVSIMRAGESMEGPLRDVAKMVRIGKILIQRDESSASKEAKLFYCKLPTDVAQRWVMLLDPMIATGGSAIKAIKLLLDHGVPENRIIFLNIIACPEGLSNLFERYPRIRIVTTMVDGCLNEDKFILPGLGDFGDRYFGTEH* # PASA_UPDATE: g12460.t1, single gene model update, valid-1, status:[pasa:asmbl_9594,status:3], valid-1 NODE_830_length_17237_cov_38.6551 . gene 11073 12587 . + . ID=g12460;Name=g12460.t1 NODE_830_length_17237_cov_38.6551 . mRNA 11073 12587 . + . ID=g12460.t1;Parent=g12460;Name=g12460.t1 NODE_830_length_17237_cov_38.6551 . five_prime_UTR 11073 11152 . + . ID=g12460.t1.utr5p1;Parent=g12460.t1 NODE_830_length_17237_cov_38.6551 . exon 11073 11777 . + . ID=g12460.t1.exon1;Parent=g12460.t1 NODE_830_length_17237_cov_38.6551 . CDS 11153 11777 . + 0 ID=cds.g12460.t1;Parent=g12460.t1 NODE_830_length_17237_cov_38.6551 . exon 11913 12587 . + . ID=g12460.t1.exon2;Parent=g12460.t1 NODE_830_length_17237_cov_38.6551 . CDS 11913 12280 . + 2 ID=cds.g12460.t1;Parent=g12460.t1 NODE_830_length_17237_cov_38.6551 . three_prime_UTR 12281 12587 . + . ID=g12460.t1.utr3p1;Parent=g12460.t1 #PROT g12460.t1 g12460 MAADKKLNPFVATALLLVADFTLLIGLYRALLPYAYALTWDGVPYAEWHPQLITWGWSLAVPCFLFWVISFLFAGGHSGIFDIHWAFAPVFFTLFYASLPAAKYDTTRTMLILGVGLVYGLRLNFNYMRTVGLGFMTKTDWRYEIIRDDTVKMGIPWPITSFFLVFVAQYLMIWLGALPIYAAHLVDTPVNWLDYAAFATSLSAILIEGTADAQLQRYLEKRAANHNSVPPVLNSGLFWYSRHPNYFGESLYWIGLYMFGISVGAPWTVLGPLNFLGLFFGYSIDAIEKKMEDAARARKDTRKLELLEQYKRTTSSFVPWFKFADSKKSM* # PASA_UPDATE: g12459.t1, single gene model update, valid-1, status:[pasa:asmbl_9590,status:12], valid-1 NODE_830_length_17237_cov_38.6551 . gene 7900 10883 . - . ID=g12459;Name=g12459.t1 NODE_830_length_17237_cov_38.6551 . mRNA 7900 10883 . - . ID=g12459.t1;Parent=g12459;Name=g12459.t1 NODE_830_length_17237_cov_38.6551 . five_prime_UTR 10846 10883 . - . ID=g12459.t1.utr5p1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 10759 10883 . - . ID=g12459.t1.exon1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 10759 10845 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 10414 10542 . - . ID=g12459.t1.exon2;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 10414 10542 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 9168 10124 . - . ID=g12459.t1.exon3;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 9168 10124 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 8686 8880 . - . ID=g12459.t1.exon4;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 8686 8880 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 8364 8555 . - . ID=g12459.t1.exon5;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 8364 8555 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . exon 7900 8205 . - . ID=g12459.t1.exon6;Parent=g12459.t1 NODE_830_length_17237_cov_38.6551 . CDS 7900 8205 . - 0 ID=cds.g12459.t1;Parent=g12459.t1 #PROT g12459.t1 g12459 MSAMEEEKRASGLVVLGSFITRALDDVRRGVTTDYAFIVKELSNEAIEAVALKRWLQALTLCVSRLTQQHLQIVQAALSVPWASMDNSVADVFIGFLENLVSAQAFYVPICLKALVKSFLVASPSAPATPSRDLAPPASDPSLTFRRAHEAIFSILQIVPTGPSSLMLVLHDCFPHHRRDAPVLATYLDNALAICTYVPVLREQILHLAIARMIKIDVEISPEADDDDDDDGDAAEGADGDGDGAMFEMDRDAVPEDDPAAQEMPEKLDAMMLVMFEFIERHRAGGGEATGELFAAMLSAFERIILATHRSRCVQFLLFRMCSFAADYSEVFLGLVVRKALDDGCHAVTRQTAAAYAASFIARATFVPMQMVRQFFDIVIPWLHDYIAGHEAPLSTSDSNVDTSLHGVFYLMCQAVFYVFCFRSEEILASGGGAGAEYMRRLGFDRIVQSSLNPLKVCFQAVVREFARITREHEVVYCYVVLERNKRIALHSNRTILDAFFPFDPYVLKRSSAFVADLYREWQGEPDDGDSDDERIDSSAMEGDEDADDMTDASSSLADATPTDSYVMKSLLQRMQHPMHAGVSGSSSPHFHGTAHGDSRGRTGRRERRVSEGAGFVGSPF* # ORIGINAL: g12457.t1 original gene structure, not modified by PASA NODE_830_length_17237_cov_38.6551 AUGUSTUS gene 57 1590 . - . ID=g12457;Name=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS mRNA 57 1590 . - . ID=g12457.t1;Parent=g12457;Name=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 1356 1590 . - . ID=g12457.t1.exon1;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 1356 1590 . - 0 ID=cds.g12457.t1;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 979 1141 . - . ID=g12457.t1.exon2;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 979 1141 . - 2 ID=cds.g12457.t1;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 388 570 . - . ID=g12457.t1.exon3;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 388 570 . - 1 ID=cds.g12457.t1;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 57 245 . - . ID=g12457.t1.exon4;Parent=g12457.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 57 245 . - 1 ID=cds.g12457.t1;Parent=g12457.t1 #PROT g12457.t1 g12457 MHPSATATATGVDEDTNAYDDVAFGGSLSSAWDAASSASSTKRSPTKGRILRPTATSTAGATECAGRAGKYGASNGHCGANDKAKPKLFRDGEGPITVADIDVAMPAATLRWLKSYANRRLNGAQRSRYLWDETAFGRACAGKALGAECEVAVEDRAVAGVCADAMYPGEVLCTSKETIMSFAECKDGKLPGDSCTVAYRGGTSTGVCGHDGKGDSMVCYTEGSAKFISAMTRAILRFPSMPANVTVGGRLAVGNI # ORIGINAL: g12458.t1 original gene structure, not modified by PASA NODE_830_length_17237_cov_38.6551 AUGUSTUS gene 2400 7282 . + . ID=g12458;Name=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS mRNA 2400 7282 . + . ID=g12458.t1;Parent=g12458;Name=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 2400 2786 . + . ID=g12458.t1.exon1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 2400 2786 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 2969 3030 . + . ID=g12458.t1.exon2;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 2969 3030 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 3525 3673 . + . ID=g12458.t1.exon3;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 3525 3673 . + 1 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 3840 3962 . + . ID=g12458.t1.exon4;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 3840 3962 . + 2 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 4167 4261 . + . ID=g12458.t1.exon5;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 4167 4261 . + 2 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 4445 4484 . + . ID=g12458.t1.exon6;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 4445 4484 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 4635 4715 . + . ID=g12458.t1.exon7;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 4635 4715 . + 2 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 5075 5082 . + . ID=g12458.t1.exon8;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 5075 5082 . + 2 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 5400 5486 . + . ID=g12458.t1.exon9;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 5400 5486 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 5682 5776 . + . ID=g12458.t1.exon10;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 5682 5776 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 5910 5935 . + . ID=g12458.t1.exon11;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 5910 5935 . + 1 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 6110 6600 . + . ID=g12458.t1.exon12;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 6110 6600 . + 2 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 6760 7064 . + . ID=g12458.t1.exon13;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 6760 7064 . + 0 ID=cds.g12458.t1;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 7222 7282 . + . ID=g12458.t1.exon14;Parent=g12458.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 7222 7282 . + 1 ID=cds.g12458.t1;Parent=g12458.t1 #PROT g12458.t1 g12458 MAGVAVEEDDVDAFLYGDDGDSAPNAQQTQPSIKKDDGAVGVSPPLELTAESGASNNDVPQTPSAAPPVKMEVEVDATHFTPVQDSHHRPGHVVHGVGAEPAADGEPTGLRRAVVVAKKEEKEEDDGSEEYTDSSDDDVQITINAPDPPSRGFPTTPGSAGRGQRPSFSGQKPTTPHAMGGAAAAQQQQQQQQQQQQLQEARAAASAKGRLDINAPGDINGQSTFDYDIDSVADKPWRKPGADLTDYFNYGFVEDTWKAYCERQKQMRDKNKAPTKPDFEMAADGDNRPSTFRVPIRMGGRDGGNNAPRGRGGAMDAPGGFPPFFPPGANPAMMDEMMRQQGAMAAARGMPPMMMRGPFPPGMNPMGLPPGFQGGRPPMFFPPNVDAMAAMRDKEQRDKDQQNGQQQQRGESRDRDGGRDDEGAGGGDENERRQRAMKAAAAAAAATINPNPMGGIGGLPPMGAMGAMGGPMGGPMGGPMGGPMGGPPLVPMPGGPMGPMGGMGPMGPMGPMGGMGGMGGMGMGGPMGGPMRGPMGGQPPTRGPPSSEERRRSEKDRDGGREGRDRDRERSERDRSDRDSRDGRDRDRDRDRDRDRDRGDRGDRGDRGDRSERGDRGDRGERVERAERDDGRERDPDRDRDPSGDRRREGSSKRAHSPDRRDDDRKRRR* # ORIGINAL: g12461.t1 original gene structure, not modified by PASA NODE_830_length_17237_cov_38.6551 AUGUSTUS gene 12879 13538 . - . ID=g12461;Name=g12461.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS mRNA 12879 13538 . - . ID=g12461.t1;Parent=g12461;Name=g12461.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS exon 12879 13538 . - . ID=g12461.t1.exon1;Parent=g12461.t1 NODE_830_length_17237_cov_38.6551 AUGUSTUS CDS 12879 13538 . - 0 ID=cds.g12461.t1;Parent=g12461.t1 #PROT g12461.t1 g12461 MATLNAATALALAALAALMFGSADAYERRSVTLHYDEAYPSGHSLLCSVSQAGQPLLFANISPGDKYAIDTEDRYTISAIMWNPTFADSTTPLSFFAASGVVSIEKSDDASNSTPMPSPYHLRFTETPLANKSELVFANPSDATGPVTFKVYRDASLVATVVVQPGSVGHFVTEKEFVLQCQGGAENTIEFTNPSASFSVVPIISSSHVVTGHRIAVNA* # PASA_UPDATE: g12462.t1, single gene model update, valid-1, status:[pasa:asmbl_9591,status:3], valid-1 NODE_830_length_17237_cov_38.6551 . gene 14634 17200 . - . ID=g12462;Name=g12462.t1 NODE_830_length_17237_cov_38.6551 . mRNA 14634 17200 . - . ID=g12462.t1;Parent=g12462;Name=g12462.t1 NODE_830_length_17237_cov_38.6551 . five_prime_UTR 17064 17200 . - . ID=g12462.t1.utr5p1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 17051 17200 . - . ID=g12462.t1.exon1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 17051 17063 . - 0 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 16735 16862 . - . ID=g12462.t1.exon2;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 16735 16862 . - 2 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 16083 16324 . - . ID=g12462.t1.exon3;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 16083 16324 . - 0 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 15910 15983 . - . ID=g12462.t1.exon4;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 15910 15983 . - 1 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 15580 15701 . - . ID=g12462.t1.exon5;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 15580 15701 . - 2 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 15257 15409 . - . ID=g12462.t1.exon6;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 15257 15409 . - 0 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 14976 15077 . - . ID=g12462.t1.exon7;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 14976 15077 . - 0 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . exon 14634 14815 . - . ID=g12462.t1.exon8;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . CDS 14765 14815 . - 0 ID=cds.g12462.t1;Parent=g12462.t1 NODE_830_length_17237_cov_38.6551 . three_prime_UTR 14634 14764 . - . ID=g12462.t1.utr3p1;Parent=g12462.t1 #PROT g12462.t1 g12462 MEHAAGGQPEMDRLEAYSLLTSLWVTFRDEIAALDDYENSILGLLKKGCRDASLRLQLAAHAALFELLERFAATRYPMSSTLYRTLVFSFIENRSQEPVSSFILDNTIATLEALPGVPVRVLVEPFLRQISLMGVTNVDFELLLAVSKHPSLEMDGTGMGLLSFLTNACLTDPVFGRVASIPGVVIINRFHESEIVEKHVGRVVSSALSTAVASASEDPIEAEIGVYRRALGIEMIAKIINLHHQNLNNIVCPMVEECLEVHAAKHPELRALLHFFPKKNLSRKISTTSSRHSS* # ORIGINAL: g2992.t1 original gene structure, not modified by PASA NODE_18556_length_177_cov_93.4314_potentialcontaminant AUGUSTUS gene 2 177 . + . ID=g2992;Name=g2992.t1 NODE_18556_length_177_cov_93.4314_potentialcontaminant AUGUSTUS mRNA 2 177 . + . ID=g2992.t1;Parent=g2992;Name=g2992.t1 NODE_18556_length_177_cov_93.4314_potentialcontaminant AUGUSTUS exon 2 177 . + . ID=g2992.t1.exon1;Parent=g2992.t1 NODE_18556_length_177_cov_93.4314_potentialcontaminant AUGUSTUS CDS 2 177 . + 2 ID=cds.g2992.t1;Parent=g2992.t1 #PROT g2992.t1 g2992 TIVLINDRPIVTLPVATRSYVEDAAASTLFDNTLVFSDTDSAEFASATIFITNPQDVD # ORIGINAL: g8792.t1 original gene structure, not modified by PASA NODE_4081_length_2215_cov_37.7799 AUGUSTUS gene 51 1918 . - . ID=g8792;Name=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS mRNA 51 1918 . - . ID=g8792.t1;Parent=g8792;Name=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS exon 1585 1918 . - . ID=g8792.t1.exon1;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS CDS 1585 1918 . - 0 ID=cds.g8792.t1;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS exon 1020 1192 . - . ID=g8792.t1.exon2;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS CDS 1020 1192 . - 2 ID=cds.g8792.t1;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS exon 566 651 . - . ID=g8792.t1.exon3;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS CDS 566 651 . - 0 ID=cds.g8792.t1;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS exon 51 217 . - . ID=g8792.t1.exon4;Parent=g8792.t1 NODE_4081_length_2215_cov_37.7799 AUGUSTUS CDS 51 217 . - 1 ID=cds.g8792.t1;Parent=g8792.t1 #PROT g8792.t1 g8792 MGMLSGSQGGMMRLSAAAVVVFVVSVGVASAHPFVEDVFQNALDDVAASLAAVHRRNSVANEELLNCTRIAENTVMCDDVLYKIEESDAYKPGSANFYIYVSVCIFLVLTAGLMSGLTMGLMSLDTLNLTVLKNGGEPREREYAARILPVIERHHQLLVTLLLCNAAAMEALPIFLDRITNPVLAVVVSVTMVLIFGEIVPQALCTRFGLRIGASLAWLVKLLMFLLFPISWPIAKLLDMILGSEHQSFFRRA # ORIGINAL: g1331.t1 original gene structure, not modified by PASA NODE_4234_length_1966_cov_38.5066 AUGUSTUS gene 1 1702 . - . ID=g1331;Name=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS mRNA 1 1702 . - . ID=g1331.t1;Parent=g1331;Name=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS exon 1697 1702 . - . ID=g1331.t1.exon1;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS CDS 1697 1702 . - 0 ID=cds.g1331.t1;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS exon 1381 1562 . - . ID=g1331.t1.exon2;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS CDS 1381 1562 . - 0 ID=cds.g1331.t1;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS exon 1154 1205 . - . ID=g1331.t1.exon3;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS CDS 1154 1205 . - 1 ID=cds.g1331.t1;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS exon 639 811 . - . ID=g1331.t1.exon4;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS CDS 639 811 . - 0 ID=cds.g1331.t1;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS exon 1 216 . - . ID=g1331.t1.exon5;Parent=g1331.t1 NODE_4234_length_1966_cov_38.5066 AUGUSTUS CDS 1 216 . - 1 ID=cds.g1331.t1;Parent=g1331.t1 #PROT g1331.t1 g1331 MELEAMNPFDESETKVAYMATVVSVASPFVTITLDVQQGANFICPIDSPLIAPVCTAEKMGLRLLTPVKKLPGGGRMAKMAMDVMTAVYGRDHPNVADATSTFLHIQSNVFGSDKGTEYVGGSSSADLAAQALDTIRKYYGENHPKYANMLEVCAEMTYMVSKDSQRYGNELVRAFEIREITLGRNHASLNVPANQLAVHFLNQNDDDK # ORIGINAL: g493.t1 original gene structure, not modified by PASA NODE_2864_length_4905_cov_51.1946 AUGUSTUS gene 3942 4682 . - . ID=g493;Name=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS mRNA 3942 4682 . - . ID=g493.t1;Parent=g493;Name=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS exon 4572 4682 . - . ID=g493.t1.exon1;Parent=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS CDS 4572 4682 . - 0 ID=cds.g493.t1;Parent=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS exon 4311 4406 . - . ID=g493.t1.exon2;Parent=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS CDS 4311 4406 . - 0 ID=cds.g493.t1;Parent=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS exon 3942 4016 . - . ID=g493.t1.exon3;Parent=g493.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS CDS 3942 4016 . - 0 ID=cds.g493.t1;Parent=g493.t1 #PROT g493.t1 g493 MSERSGLCDDPPVTPRHSAELLEVLGEGAFGVVHKAQVVVGSHMRVCAVKTLKSNVSVEQRIEFISEAEIILNLSHLNVVNIVGVVTDEDPML* # ORIGINAL: g492.t1 original gene structure, not modified by PASA NODE_2864_length_4905_cov_51.1946 AUGUSTUS gene 1211 2035 . - . ID=g492;Name=g492.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS mRNA 1211 2035 . - . ID=g492.t1;Parent=g492;Name=g492.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS exon 1211 2035 . - . ID=g492.t1.exon1;Parent=g492.t1 NODE_2864_length_4905_cov_51.1946 AUGUSTUS CDS 1211 2035 . - 0 ID=cds.g492.t1;Parent=g492.t1 #PROT g492.t1 g492 MYSLMSSCWHEEPEHRPTFEKLAAICAAIEKEGEGDKDAVDRFGAISSIDDSTVLGTDERVGRAPHIPFLSDGSVTLSQGRAVGLPTFFALAGAGAYANFASPSIEAARQLVGGAIVYDNYDNSGTNQSGNRNSDNCKNSYSNDNNDSKYSNDSDYSNQRDIRGGVDMGLPASAKCMNVNSSPPLPLSKKGALSESARASKRAHIEARDSPCDSEARYAMSAPQAGTAPLAQEALPALSVYTGTPLAVRSTLDSASGSSWDRRRRGSPRQCGGQ* # ORIGINAL: g7942.t1 original gene structure, not modified by PASA NODE_1966_length_8301_cov_39.8803 AUGUSTUS gene 1580 5645 . - . ID=g7942;Name=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS mRNA 1580 5645 . - . ID=g7942.t1;Parent=g7942;Name=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 5545 5645 . - . ID=g7942.t1.exon1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 5545 5645 . - 0 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 4747 5249 . - . ID=g7942.t1.exon2;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 4747 5249 . - 1 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 4377 4500 . - . ID=g7942.t1.exon3;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 4377 4500 . - 2 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 4037 4131 . - . ID=g7942.t1.exon4;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 4037 4131 . - 1 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 3263 3511 . - . ID=g7942.t1.exon5;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 3263 3511 . - 2 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 2825 3028 . - . ID=g7942.t1.exon6;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 2825 3028 . - 2 ID=cds.g7942.t1;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 1580 2346 . - . ID=g7942.t1.exon7;Parent=g7942.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 1580 2346 . - 2 ID=cds.g7942.t1;Parent=g7942.t1 #PROT g7942.t1 g7942 MALWRGILICAGAASALAVTSYVGARRRRRQRARQALIDALRPIELTQSELEDAVATVSQQQQQQQQQQQQQQQQQQQQQQQTPQRTGTLRPSQVGSSTPGAANINNSGAVGPTAAILSSGATPIPPSRMPATQRPGAPSQQPQPPTHPGRTRASMSTQMPGLSEDVAASAGAVAQACVQDGETQNLLNLLYTIAEDQAKREGFVHRGITCNMCSASPVRGIRYKCANCVDYDLCENCEALDRHNRTHVFLRIKIPIPPLANPRAALLSAFYPGVDQVEIEALYEQFKTLSTADVSGGGIDRETFDQCLGPLGADRNLVTERIFVFFDQDGDGVISFDEFVSGLSVLWKGSHEEKIEFAFRGYDPEGTGYVTREELQRMFTAYFHLSMDVVRDVVKALEEEMMAGFEDDGGKPVSAVFTAPIPREGEPRPPRKRRSVPAEGRDDDDNDEDGWRRSSRISRHGNRGDDWDEAGPSSQPSRGETPDDLDRNGNTDADLLYESSPGTSLRERKDELSLSPRQRRRQIQRLRHSIPSDKDRDREREKDRDRDGAQGQTSSTQPRALRTTLPRGHARFEDEDIDSLPATPVKLTQDDAALSWKATPVRSVRGGRRPPHRSLSSRDESMWPVMEAMSQDAIKEMVDKAFLAADVDGDGKISFEEFRVWASADSSMTAWFDGLGSVF* # ORIGINAL: g7941.t1 original gene structure, not modified by PASA NODE_1966_length_8301_cov_39.8803 AUGUSTUS gene 196 1143 . + . ID=g7941;Name=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS mRNA 196 1143 . + . ID=g7941.t1;Parent=g7941;Name=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 196 332 . + . ID=g7941.t1.exon1;Parent=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 196 332 . + 1 ID=cds.g7941.t1;Parent=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 665 815 . + . ID=g7941.t1.exon2;Parent=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 665 815 . + 2 ID=cds.g7941.t1;Parent=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS exon 1113 1143 . + . ID=g7941.t1.exon3;Parent=g7941.t1 NODE_1966_length_8301_cov_39.8803 AUGUSTUS CDS 1113 1143 . + 1 ID=cds.g7941.t1;Parent=g7941.t1 #PROT g7941.t1 g7941 FDKIKSVDATSPLNSASLHPDNGRFVAGGNDLYLHVFDYESGKETEVYKGHHGPVHCVRYSPDGELYASGSEDGTVRLWQTNVGKEYGLWRMSEGASAEGEAGGD* # PASA_UPDATE: g7943.t1, single gene model update, valid-1, status:[pasa:asmbl_3130,status:12], valid-1 NODE_1966_length_8301_cov_39.8803 . gene 6084 7550 . - . ID=g7943;Name=g7943.t1 NODE_1966_length_8301_cov_39.8803 . mRNA 6084 7550 . - . ID=g7943.t1;Parent=g7943;Name=g7943.t1 NODE_1966_length_8301_cov_39.8803 . five_prime_UTR 7484 7550 . - . ID=g7943.t1.utr5p1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . exon 7481 7550 . - . ID=g7943.t1.exon1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . CDS 7481 7483 . - 0 ID=cds.g7943.t1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . exon 6953 7108 . - . ID=g7943.t1.exon2;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . CDS 6953 7108 . - 0 ID=cds.g7943.t1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . exon 6579 6617 . - . ID=g7943.t1.exon3;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . CDS 6579 6617 . - 0 ID=cds.g7943.t1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . exon 6084 6251 . - . ID=g7943.t1.exon4;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . CDS 6204 6251 . - 0 ID=cds.g7943.t1;Parent=g7943.t1 NODE_1966_length_8301_cov_39.8803 . three_prime_UTR 6084 6203 . - . ID=g7943.t1.utr3p1;Parent=g7943.t1 #PROT g7943.t1 g7943 MGGGERFNYPRYVWAPSGGWWCNPVHWRRNTALVFLGIIAISYPVYRLSVRLETFPRQNNRPWLNKETKDAHSAHGDDHHH* # PASA_UPDATE: g5190.t1, single gene model update, valid-1, status:[pasa:asmbl_6685,status:12], valid-1 NODE_3891_length_2561_cov_33.895 . gene 23 869 . + . ID=g5190;Name=g5190.t1 NODE_3891_length_2561_cov_33.895 . mRNA 23 869 . + . ID=g5190.t1;Parent=g5190;Name=g5190.t1 NODE_3891_length_2561_cov_33.895 . exon 23 58 . + . ID=g5190.t1.exon1;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . CDS 23 58 . + 0 ID=cds.g5190.t1;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . exon 216 305 . + . ID=g5190.t1.exon2;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . CDS 216 305 . + 0 ID=cds.g5190.t1;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . exon 488 869 . + . ID=g5190.t1.exon3;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . CDS 488 607 . + 0 ID=cds.g5190.t1;Parent=g5190.t1 NODE_3891_length_2561_cov_33.895 . three_prime_UTR 608 869 . + . ID=g5190.t1.utr3p1;Parent=g5190.t1 #PROT g5190.t1 g5190 MTSDKCHQCNEPEFENGDTVHVRCEQDYIQMRAEKCIHCRGPLCEVVGRFSGSFYPIDGSDGQAVGKCHEECYDAFCKASN* # ORIGINAL: g5191.t1 original gene structure, not modified by PASA NODE_3891_length_2561_cov_33.895 AUGUSTUS gene 1407 2117 . - . ID=g5191;Name=g5191.t1 NODE_3891_length_2561_cov_33.895 AUGUSTUS mRNA 1407 2117 . - . ID=g5191.t1;Parent=g5191;Name=g5191.t1 NODE_3891_length_2561_cov_33.895 AUGUSTUS exon 1407 2117 . - . ID=g5191.t1.exon1;Parent=g5191.t1 NODE_3891_length_2561_cov_33.895 AUGUSTUS CDS 1407 2117 . - 0 ID=cds.g5191.t1;Parent=g5191.t1 #PROT g5191.t1 g5191 MQAMHWKEAAVAVAAQTSTRMIASSQQPLRSPSQTSQTQASQTSHPSSASVSPREQSPPTRMPKLCGPGHPADTVSGHVDPRVEYGMVPMAPMSALAIAHQQMHHHHQQQQQQQQQQQQQMQQQHHQYAMHSAMPTHYYQRPGHPHPQYAHAQAQAQAHVQFQRAVPSSVYMNLPPFPSPTDFLAAAAAYATSEATQGLSSVGDAAHPHVRGGPEYTNKMKGERGAMHHSSIWRPF* # ORIGINAL: g8748.t1 original gene structure, not modified by PASA NODE_1327_length_12090_cov_78.4436 AUGUSTUS gene 267 939 . - . ID=g8748;Name=g8748.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS mRNA 267 939 . - . ID=g8748.t1;Parent=g8748;Name=g8748.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 905 939 . - . ID=g8748.t1.exon1;Parent=g8748.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 905 939 . - 0 ID=cds.g8748.t1;Parent=g8748.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 267 646 . - . ID=g8748.t1.exon2;Parent=g8748.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 267 646 . - 1 ID=cds.g8748.t1;Parent=g8748.t1 #PROT g8748.t1 g8748 MRIRILWEAVHQTGASAPVPAGSAGGGGVPIAVVGGAIGGCVALLGCAFAIFYYRGHILKAFESRGSMSSRVGNGSRDALARSGDLDVEDASYMRGQALTEFKQGDGGLLMGAAKTSEDGLEGHDMYATIDALTENVI # ORIGINAL: g8749.t1 original gene structure, not modified by PASA NODE_1327_length_12090_cov_78.4436 AUGUSTUS gene 7788 9662 . - . ID=g8749;Name=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS mRNA 7788 9662 . - . ID=g8749.t1;Parent=g8749;Name=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 9609 9662 . - . ID=g8749.t1.exon1;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 9609 9662 . - 0 ID=cds.g8749.t1;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 8857 9036 . - . ID=g8749.t1.exon2;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 8857 9036 . - 0 ID=cds.g8749.t1;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 8474 8617 . - . ID=g8749.t1.exon3;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 8474 8617 . - 0 ID=cds.g8749.t1;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 7889 8228 . - . ID=g8749.t1.exon4;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 7889 8228 . - 0 ID=cds.g8749.t1;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 7788 7792 . - . ID=g8749.t1.exon5;Parent=g8749.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 7788 7792 . - 2 ID=cds.g8749.t1;Parent=g8749.t1 #PROT g8749.t1 g8749 MAIPLAMLFLVTFGTVPQMARADGTVTAYFFSVKNAGGLQKNGNCCDNLCAYGVSPCICNPFEECDTAINFCLNYNRAPNGTCQSDPNDGLFSNRYLYFSSNTLGGNEFTLIDPASFSRSFTGSLKGVDYDIRLELVDNDVLTTAPITDAVRSISSLKNTNGSVIKFTEEASWITFVWGYSVKCAKNYYGNDCGTYCDATTCGANGSCNLNSGVCDCKGNFTGGKCEACKAGYYGAKCDV* # ORIGINAL: g8750.t1 original gene structure, not modified by PASA NODE_1327_length_12090_cov_78.4436 AUGUSTUS gene 10722 11885 . + . ID=g8750;Name=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS mRNA 10722 11885 . + . ID=g8750.t1;Parent=g8750;Name=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 10722 10968 . + . ID=g8750.t1.exon1;Parent=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 10722 10968 . + 0 ID=cds.g8750.t1;Parent=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 11299 11382 . + . ID=g8750.t1.exon2;Parent=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 11299 11382 . + 2 ID=cds.g8750.t1;Parent=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS exon 11773 11885 . + . ID=g8750.t1.exon3;Parent=g8750.t1 NODE_1327_length_12090_cov_78.4436 AUGUSTUS CDS 11773 11885 . + 2 ID=cds.g8750.t1;Parent=g8750.t1 #PROT g8750.t1 g8750 MFKKPFHVKSNTSIRGSDRRKLRADVKTLFRIENDDDVASLFGSKDEITVTKAMTHAELPVTVYSVNGQPFFLEVEGRLMPTVYAMWKRPTGLLTFSTWAPVFDKLLSGADLMLPGVIVPSKNIALLGEFEANTVCAVCMYGNGWVV* # PASA_UPDATE: g6732.t1, single gene model update, valid-1, status:[pasa:asmbl_3037,status:13],[pasa:asmbl_3040,status:12], valid-1 NODE_192_length_32658_cov_39.1998 . gene 29042 30596 . - . ID=g6732;Name=g6732.t1 NODE_192_length_32658_cov_39.1998 . mRNA 29042 30596 . - . ID=g6732.t1;Parent=g6732;Name=g6732.t1 NODE_192_length_32658_cov_39.1998 . five_prime_UTR 30558 30596 . - . ID=g6732.t1.utr5p1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . exon 30477 30596 . - . ID=g6732.t1.exon1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . CDS 30477 30557 . - 0 ID=cds.g6732.t1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . exon 30219 30272 . - . ID=g6732.t1.exon2;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . CDS 30219 30272 . - 0 ID=cds.g6732.t1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . exon 29821 29896 . - . ID=g6732.t1.exon3;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . CDS 29821 29896 . - 0 ID=cds.g6732.t1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . exon 29042 29688 . - . ID=g6732.t1.exon4;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . CDS 29591 29688 . - 2 ID=cds.g6732.t1;Parent=g6732.t1 NODE_192_length_32658_cov_39.1998 . three_prime_UTR 29042 29590 . - . ID=g6732.t1.utr3p1;Parent=g6732.t1 #PROT g6732.t1 g6732 MESIQRVVWLRMTLQDRSTRLRDAEKEVETLKVLVAELDSLKAGRNVYKKTSVGNILFKVDNVKTKVTAKDTLESLNNEVARLRNEIGALKTELDHMSSPVR* # ORIGINAL: g6728.t1 original gene structure, not modified by PASA NODE_192_length_32658_cov_39.1998 AUGUSTUS gene 2365 7726 . + . ID=g6728;Name=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS mRNA 2365 7726 . + . ID=g6728.t1;Parent=g6728;Name=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 2365 3606 . + . ID=g6728.t1.exon1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 2365 3606 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 3910 3969 . + . ID=g6728.t1.exon2;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 3910 3969 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 4289 4487 . + . ID=g6728.t1.exon3;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 4289 4487 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 4628 5004 . + . ID=g6728.t1.exon4;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 4628 5004 . + 2 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 5125 5163 . + . ID=g6728.t1.exon5;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 5125 5163 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 5326 5332 . + . ID=g6728.t1.exon6;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 5326 5332 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 5623 6050 . + . ID=g6728.t1.exon7;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 5623 6050 . + 2 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 6300 6644 . + . ID=g6728.t1.exon8;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 6300 6644 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 6794 6935 . + . ID=g6728.t1.exon9;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 6794 6935 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 7211 7347 . + . ID=g6728.t1.exon10;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 7211 7347 . + 2 ID=cds.g6728.t1;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 7541 7726 . + . ID=g6728.t1.exon11;Parent=g6728.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 7541 7726 . + 0 ID=cds.g6728.t1;Parent=g6728.t1 #PROT g6728.t1 g6728 MDDEANASGPPEVVDLCESSSPDGDVGLTDSSSSVSETSSCCSTPCMIDLTADDEPRPDLPVKAVPAVEPMPSLAAVPAPTSVPDSPGPALPAARVLPVTQTSLLGVGGVLVACDGTPAVSETYNLRAEGVAPSSEDASVEAAAAPVQPPSPSSRQGTAAALVDAPPVSPCAPAVNSALHNGRRSFECEKLEGTLFAPRLPVKSDESVGGADDSASDDDDMISNGATDGKSAKMGILDDVSLSPFHEKSIPPRSFDESRENPDEGDRAEVEARNSDARVTMTDDGTLATNGGGAHAHSLSHVEQSLPQSDPTTPPPDVRLVMLPKNNAFQRAPRVWQVTRPNGQYYMLNSVVKELGLGSAAHEASLLATLQASAEKVACRSPEINRLLEDGALSDNDMEDGCVWLIDQGGLSALTGVNASKKKTARKCVGPRRPGLHDPSRGVDASAQSLGYMDGGDSGISGMSGLMSSPLGDESSKSQKRSGDKLENEIKKKPKKHRAQAKNDDDTGAMSLGPRVRVRTVLVARSEMGAAELPGVKELLAVNNNTNNNNNNSTDATTFQLRSIARPLVDIFPHVSVLATVRDLDSKGTLRMQSSEEADLLDDDVMGFHSIPGAMIDRSDLGLMLQAPGWQNAWGVKVSVGAPTGFPAVPQQQVARVAIAGENSRALVSAMPLDDAALMQCLDGAMCDSSGLVQTIGDPPGAMSGAAGSGASARDATNVSRDLNLSLNANDGGHDGMAANVTPTPTQQKKKTREVREHTDEYNEVVRLWQDKVSAKCPGEPPITIINDVDDEPPPDNFEYIAARVESGEVQIAPVVGYAAACACTVFDAKGRLKQTCSLDSPCCDIVFGVARAYKKGGRLAVDPSLGTNDAIYECNALCHCDVTCRNRVVQRGRKVKLRMFRTDNGRGWGVQALEDIPQGSFVCEYVGEIITFEEAERRGQENDAIGVTYLFDLDFHTPKTEDCRFVLDAGAKGNISRFINHSCDPNLVSRSVWIDNRNPDLPHICLFARHTIRRFQELTYNYHIDSCGGAVTAPCLCGAAICKGTMTATFSH* # ORIGINAL: g6731.t1 original gene structure, not modified by PASA NODE_192_length_32658_cov_39.1998 AUGUSTUS gene 20777 29019 . + . ID=g6731;Name=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS mRNA 20777 29019 . + . ID=g6731.t1;Parent=g6731;Name=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 20777 20928 . + . ID=g6731.t1.exon1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 20777 20928 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 21180 21590 . + . ID=g6731.t1.exon2;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 21180 21590 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 21905 22031 . + . ID=g6731.t1.exon3;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 21905 22031 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 22415 22597 . + . ID=g6731.t1.exon4;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 22415 22597 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 22804 22947 . + . ID=g6731.t1.exon5;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 22804 22947 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 23279 23561 . + . ID=g6731.t1.exon6;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 23279 23561 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 23844 24031 . + . ID=g6731.t1.exon7;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 23844 24031 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 24252 24367 . + . ID=g6731.t1.exon8;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 24252 24367 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 24751 24861 . + . ID=g6731.t1.exon9;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 24751 24861 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 25134 25255 . + . ID=g6731.t1.exon10;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 25134 25255 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 25611 25903 . + . ID=g6731.t1.exon11;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 25611 25903 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 26229 26382 . + . ID=g6731.t1.exon12;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 26229 26382 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 26664 26815 . + . ID=g6731.t1.exon13;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 26664 26815 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 27046 27310 . + . ID=g6731.t1.exon14;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 27046 27310 . + 0 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 27470 27577 . + . ID=g6731.t1.exon15;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 27470 27577 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 27850 28066 . + . ID=g6731.t1.exon16;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 27850 28066 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 28250 28387 . + . ID=g6731.t1.exon17;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 28250 28387 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 28628 28755 . + . ID=g6731.t1.exon18;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 28628 28755 . + 1 ID=cds.g6731.t1;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 28892 29019 . + . ID=g6731.t1.exon19;Parent=g6731.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 28892 29019 . + 2 ID=cds.g6731.t1;Parent=g6731.t1 #PROT g6731.t1 g6731 MVVVETGILASLFARYATTHGGNVPPIVYAALTAGAVIIATRFVRYELTLRRRRHAAREKPAAERRLHTRVDQQGLVFIDDEEETDDGFPHVHAAEDEADEVDEAERDADEDDEDHEDHGDAEEADVIAAAVDEASPDSPHPRPQRLLSVPEGETSEDGVPSSPRKSTPEGLSQAEVMFLKSNVNVFRYLDRHTVRLISNQLVCEVVPAGKTIFSKGDLMPALYIVTKGTVRLYIDSDTGGEIHLCDIRDGESLTSLLCYLEAMALCPTRTPCHVTARAVTDTELISLKIEDFRALAEQYPAKFVNIAQVIMVRLQRVTFLTLYRYLGLTHELVNDTDLGDDAVSMSRDGATDALGADAVDSTLKLISGVLGLTPEMTSEELGDSVELVSLAKGEAVLEEKEESGGLYFVVKGALDVHMREGDGTRKMYRVVAGGVVGHLAALTGDQSEVFATAASATTVACLPQYAFASLVERYPKVAIHVAQSLIAKLSPLVRQFDFALDWVYERAGSVLQEEDGDVDGLYIVLHGRMRATKAGTSGKPTFVEEFGRGSSIGELELLTESKSPTTITATRDTELCKIPRETFRMLTQRFPRLMAHFALAMGKRLEKQYTRGIAKPVEENLATVAVVAMTSDVPLSEFADRLVSSLERIGTSLCISRDTVMSQFGDRSMEGVNKIRLAGWLGQQEEDHNVVVYETDKKMSTWTRRCIRQGLYQKAEALYAKGDFEMALVFYHRGHKLRPELDEFRLGIQKAREAIGNSIGNPSTRILTTKVGSDGAAESTANRAASQLAKADANKPRPGAPAATALASPGKATSAGTDRAKQPAARTKQGDQTIKQLLGELYEDREYLEELMLDEEFVKRSSENMYDLVSGGISYLDTRTEFWRQQKPLYARKTERRIKPRTSPTREKKTDDHSTSRPKTNTAQQLSAQLDDVTAMLEDGEADRCIKAGKALLKALGEATVPDKPRMLCALHDVLGCAYLEIGNAQVALGHQQKQLQGARERNLDDVRSRALGNIGRVYARLGQFDKAAQSWEEKLPLSQTPVESAWLYHDIGRCHMELGSTQRAVEYGEKAFAAATEASDDRWLFNASILVAQSLAKGGDQTRAADHYHKAQELAQRLGDDSSVRAITKAMDELKAK* # PASA_UPDATE: g6733.t1, single gene model update, valid-1, status:[pasa:asmbl_3041,status:12], valid-1 NODE_192_length_32658_cov_39.1998 . gene 30801 32580 . - . ID=g6733;Name=g6733.t1 NODE_192_length_32658_cov_39.1998 . mRNA 30801 32580 . - . ID=g6733.t1;Parent=g6733;Name=g6733.t1 NODE_192_length_32658_cov_39.1998 . exon 32386 32580 . - . ID=g6733.t1.exon1;Parent=g6733.t1 NODE_192_length_32658_cov_39.1998 . CDS 32386 32580 . - 0 ID=cds.g6733.t1;Parent=g6733.t1 NODE_192_length_32658_cov_39.1998 . exon 30801 32216 . - . ID=g6733.t1.exon2;Parent=g6733.t1 NODE_192_length_32658_cov_39.1998 . CDS 31071 32216 . - 0 ID=cds.g6733.t1;Parent=g6733.t1 NODE_192_length_32658_cov_39.1998 . three_prime_UTR 30801 31070 . - . ID=g6733.t1.utr3p1;Parent=g6733.t1 #PROT g6733.t1 g6733 MEEVKLSVSDEVAVARSAEARAEHAAMQATARSAQLTEEMTRVSQQMADLEARLATSEREFNSYKIRVHTVLKKKKDSRDNNADAQETELTAVKLELAAANTRLAASAERIDALELQVSLLTHQLAGATAECGSLRADVKAAMELAEEQSARLALETERGGVSAADAVEKAARARESELRSLREVHAAEMHTMRGLLSDEEARANLLSAQLEEARKDGVALRADVFALRERLRDDARGQSRARGQPVGNLDDDAESGLSPRHSRTQADGRTSDGKGHVDLSRLLSMISNPGDADGGSHGTHQDDRDAAAAAAEIAHLKEEVERLETELRVVVGENRELLEIVKEGDAAAERTDAQAHMLKEEIRRLERNAARDSAVNLEYLKNVVLKYVENPSERTSLVPVLATVLHFSPQESSRAKEASAASAAWIPAPAIDSVASAWNSVRSLW* # PASA_UPDATE: g6727.t1, single gene model update, valid-1, status:[pasa:asmbl_3038,status:3], valid-1 NODE_192_length_32658_cov_39.1998 . gene 352 1721 . - . ID=g6727;Name=g6727.t1 NODE_192_length_32658_cov_39.1998 . mRNA 352 1721 . - . ID=g6727.t1;Parent=g6727;Name=g6727.t1 NODE_192_length_32658_cov_39.1998 . five_prime_UTR 1533 1721 . - . ID=g6727.t1.utr5p1;Parent=g6727.t1 NODE_192_length_32658_cov_39.1998 . exon 1063 1721 . - . ID=g6727.t1.exon1;Parent=g6727.t1 NODE_192_length_32658_cov_39.1998 . CDS 1063 1532 . - 0 ID=cds.g6727.t1;Parent=g6727.t1 NODE_192_length_32658_cov_39.1998 . exon 352 759 . - . ID=g6727.t1.exon2;Parent=g6727.t1 NODE_192_length_32658_cov_39.1998 . CDS 711 759 . - 1 ID=cds.g6727.t1;Parent=g6727.t1 NODE_192_length_32658_cov_39.1998 . three_prime_UTR 352 710 . - . ID=g6727.t1.utr3p1;Parent=g6727.t1 #PROT g6727.t1 g6727 MAFFQLTYMGPQDPIRARLAVHDEDALVEPHIAQAHSAQPPSHFESSAEGQDDARKRVRFPPINDKGSSPKLVSASLDESQLVVTSAGATRAPVKTASHKEYEVNLRKHRRPNHAPRDVYKAPVTSSQNYGWAVQDYATESWMKTPRHGHRNSEMTKFADTMGLTDREFSLF* # PASA_UPDATE: g6730.t1, single gene model update, valid-1, status:[pasa:asmbl_3039,status:3], valid-1 NODE_192_length_32658_cov_39.1998 . gene 11212 20286 . - . ID=g6730;Name=g6730.t1 NODE_192_length_32658_cov_39.1998 . mRNA 11212 20286 . - . ID=g6730.t1;Parent=g6730;Name=g6730.t1 NODE_192_length_32658_cov_39.1998 . five_prime_UTR 20074 20286 . - . ID=g6730.t1.utr5p1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 19798 20286 . - . ID=g6730.t1.exon1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 19798 20073 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 19318 19620 . - . ID=g6730.t1.exon2;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 19318 19620 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 18987 19090 . - . ID=g6730.t1.exon3;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 18987 19090 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 18525 18645 . - . ID=g6730.t1.exon4;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 18525 18645 . - 1 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 18008 18122 . - . ID=g6730.t1.exon5;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 18008 18122 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 17598 17725 . - . ID=g6730.t1.exon6;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 17598 17725 . - 2 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 17183 17340 . - . ID=g6730.t1.exon7;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 17183 17340 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 16836 16953 . - . ID=g6730.t1.exon8;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 16836 16953 . - 1 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 16528 16653 . - . ID=g6730.t1.exon9;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 16528 16653 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 16130 16237 . - . ID=g6730.t1.exon10;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 16130 16237 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 15792 15938 . - . ID=g6730.t1.exon11;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 15792 15938 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 15562 15644 . - . ID=g6730.t1.exon12;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 15562 15644 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 15317 15422 . - . ID=g6730.t1.exon13;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 15317 15422 . - 1 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 15005 15121 . - . ID=g6730.t1.exon14;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 15005 15121 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 14515 14683 . - . ID=g6730.t1.exon15;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 14515 14683 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 14012 14166 . - . ID=g6730.t1.exon16;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 14012 14166 . - 2 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 13676 13855 . - . ID=g6730.t1.exon17;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 13676 13855 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 13296 13430 . - . ID=g6730.t1.exon18;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 13296 13430 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 13038 13146 . - . ID=g6730.t1.exon19;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 13038 13146 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 12677 12830 . - . ID=g6730.t1.exon20;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 12677 12830 . - 2 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 12346 12409 . - . ID=g6730.t1.exon21;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 12346 12409 . - 1 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 11960 12140 . - . ID=g6730.t1.exon22;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 11960 12140 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 11625 11773 . - . ID=g6730.t1.exon23;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 11625 11773 . - 2 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . exon 11212 11511 . - . ID=g6730.t1.exon24;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . CDS 11272 11511 . - 0 ID=cds.g6730.t1;Parent=g6730.t1 NODE_192_length_32658_cov_39.1998 . three_prime_UTR 11212 11271 . - . ID=g6730.t1.utr3p1;Parent=g6730.t1 #PROT g6730.t1 g6730 MADGGGETKQWEFDSFDDGSTKEVKDFQQNQYQRFLEEHDAQLRGVEDAIQAEGAGSDTWDWNLDPIALHIVPYEQTTVLELVQTNNKILTKVLTAFASLCLEINALRHEAETTFYGSLAMYGEVAAHSDAPVKHDEGEVQLMVARLLPLLQSVDSFVRRCQVVLRNLTHQLSALHTKNKSAQAIDVTGVHLQTVFEYMGELLAVLITLDEIIAANSNITNHWSLYKRMFKSIRADPARFGTDETGVRQMERVLMNLESQVLTGNMFQNCVDQDFDAGIDVTHNGIFNEEFALNIRDIFAFIDMRLGEANELDHRQKFVGLCGIFVFHFQLFRIFDKKMFQLIWNAHRKVPVVPLVGNVMFFANDFLLRKIPRMDKVLDKKSLDMGPFRKQYLQQVDQALTRDTQNWYLLVSTWMVRMESGLNRSASLSSELGGKANLFVQGVLYAHSMCNLIKSAMNLHVTLEVPMTKSIARSLCSLIELLKAIEATYHRRSMAIAEVLPLVIQHVSLAIIAILDPVRQRLSQDKRYSNKHLDVLASLQLALDMLQGSATHPRRVVLNLALNIVTQMPKAFREGELDVLYNHVRRLDVLCDLFARVRAPCDASFIFWHKVILPIYLQEIFESPTDAHRLHYMVSALRDCVPLLRKAVHLEGTSTLVEAYEKELDDLLKTNLLDPLCREIETDLRLHIHSHLQLDDRNPFKVGLKDLSHYLKVRPIRFFDRYIDIKGYVTHYLDTTFYNLTTVALHDWKTYAEMRNLAAEKYGLDLTEVHLPSQTLEQGLDVLEIMRNIHIFVAKYNYNLNNQVFVERNSNNKFLNTINIRHIANSIRTHGTGIMNTTVNFTFQYLRKKFFIFSQFLYDDHIKSRLLKDMRFFKDSKDSIDQKYPFDRAEKFNKAIRKLGVTPDGMSYLDQFRILITQIGNAMGYIRMIRSGGLHYCSDAIRFVPDLEDIVSFEELVKQEGLQADVVHAARNLDATLTNLSKNFAEGTEYFEMLVDVFAPELRDAKNTHLRNFYIIIPPLTVNYVESILSGKEKLAKKNKAGATFTDDGFAMGVAYILKLLDQSLQFDSLHWFQSVTDKYEQEKIKLTESRKKGKDDEKLQQTMVLTMKRLETYQQEFELLYYSLSGARIFFRAKKSDPDAIREEQLKQQQKADDAASQAGQDVADDTVSIADTASVMGDY* # ORIGINAL: g6729.t1 original gene structure, not modified by PASA NODE_192_length_32658_cov_39.1998 AUGUSTUS gene 8600 10739 . - . ID=g6729;Name=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS mRNA 8600 10739 . - . ID=g6729.t1;Parent=g6729;Name=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 10565 10739 . - . ID=g6729.t1.exon1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 10565 10739 . - 0 ID=cds.g6729.t1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 10179 10435 . - . ID=g6729.t1.exon2;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 10179 10435 . - 2 ID=cds.g6729.t1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 9852 9989 . - . ID=g6729.t1.exon3;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 9852 9989 . - 0 ID=cds.g6729.t1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 9357 9456 . - . ID=g6729.t1.exon4;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 9357 9456 . - 0 ID=cds.g6729.t1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 8923 9072 . - . ID=g6729.t1.exon5;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 8923 9072 . - 2 ID=cds.g6729.t1;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS exon 8600 8766 . - . ID=g6729.t1.exon6;Parent=g6729.t1 NODE_192_length_32658_cov_39.1998 AUGUSTUS CDS 8600 8766 . - 2 ID=cds.g6729.t1;Parent=g6729.t1 #PROT g6729.t1 g6729 MGSQWLVAVADDLGICRERDDGIFRCVQDGIVGCASVLANGPTSGEAVQRAREYGVAIGLHLNLTEGRPLCAREDVRSIVDANGMMLGKHGFRNALSAILCASTQEMGSGQASASGPCSAVALGAEVGDAVDFLSDIRREVAAQIDWLDEANTSSSLSHVDGHQHVHVIPHVASILAADRRVHFTRVPFEDLACAPWVHGERRAFLQSVCRDATAARAIFKDCGVSHTDAFVGLSVMGADLSLHRLHDAVGRCLEGGARSIEYMCHPGYAGSSWDDFNASADREWEMQCLCDDAADLQASLANLGLRIHRGSHYGLANSASAQSVAVK* # PASA_UPDATE: g6726.t1, single gene model update, valid-1, status:[pasa:asmbl_3035,status:12], valid-1 NODE_192_length_32658_cov_39.1998 . gene 65 348 . + . ID=g6726;Name=g6726.t1 NODE_192_length_32658_cov_39.1998 . mRNA 65 348 . + . ID=g6726.t1;Parent=g6726;Name=g6726.t1 NODE_192_length_32658_cov_39.1998 . five_prime_UTR 65 65 . + . ID=g6726.t1.utr5p1;Parent=g6726.t1 NODE_192_length_32658_cov_39.1998 . exon 65 348 . + . ID=g6726.t1.exon1;Parent=g6726.t1 NODE_192_length_32658_cov_39.1998 . CDS 66 179 . + 0 ID=cds.g6726.t1;Parent=g6726.t1;5_prime_partial=true NODE_192_length_32658_cov_39.1998 . three_prime_UTR 180 348 . + . ID=g6726.t1.utr3p1;Parent=g6726.t1 #PROT g6726.t1 g6726 LVSRYLNQLRDVAPSHPFVRDIAAKEENFARQAATIV* # ORIGINAL: g2211.t1 original gene structure, not modified by PASA NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS gene 100 1881 . + . ID=g2211;Name=g2211.t1 NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS mRNA 100 1881 . + . ID=g2211.t1;Parent=g2211;Name=g2211.t1 NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS exon 100 544 . + . ID=g2211.t1.exon1;Parent=g2211.t1 NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS CDS 100 544 . + 0 ID=cds.g2211.t1;Parent=g2211.t1 NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS exon 830 1881 . + . ID=g2211.t1.exon2;Parent=g2211.t1 NODE_2624_length_5626_cov_34.0186_potentialcontaminant AUGUSTUS CDS 830 1881 . + 2 ID=cds.g2211.t1;Parent=g2211.t1 #PROT g2211.t1 g2211 GFLTSPDWGLSNKFESSLEFYYVPLKALMSSLSSFSFDSGLEPQLNATRSRGRHAIVRVWLDYPGLATGVPDALAALISFNNYTDYGGGRSPDYADDRLYVWLEAFVRAFGAKYDGDGRIAFIQIGILGFWGEWHTYRDSCSCDTWFPAADKQRRLLSSFDSAFNVTKLLVRTASDVTVAYNVGFHDDSFAQSTVGALDWFFANQISHTTGASDRFKTQPIGGELRPELQSTIFSASYVQGTYSQDFTACVRATKASWMINAHAFSTGYTGADLSRAVAGSLSLGYEFRLVNASVDVSAGVSAANVRVVVENSGVAPFYYPLSLVVRYCGEASRGVEMRTESSAEAYDLRQLMPAARASLVTTLNLTLCANATLRFALLAGGPFVGIVVRLANSALGGGVVSRGEIAWTPVSTCRVDGALQLSSSSSCSALTVASTAAPTAASTAVTVRVTPTNTRGAVAVGDGDTDAGGGDAGPSLYHPCAMLIALAAVTASLIAGL*